chr1	931634	HG2_PB_SVrefine2PB10Xhap12_17	A	AGGGAGGGCAGAAAGGACCCCCACGTGAGGGGGCACCCCACATCTGGGGCCACAGGATGCAGGGTGGGGAGGGCAGAAAGGCCCCCCCGCGGGAAGGGGCACCCCACATCTGGGCCACAGGATGCAGGGTGGGGAGGGCAGAAAGGCCCCCCCGCGGGAAGGGGCACCCCACATCTGGGGCCACAGGATGCAGGGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_17:HG2_PB_SVrefine2Falcon1plusDovetail_18:HG3_PB_pbsv_14:HG4_PB_assemblyticsfalcon_13:HG4_PB_SVrefine2Falcon1Dovetail_9:HG3_PB_assemblyticsfalcon_15:HG2_PB_HySA_21:HG3_PB_pbsv_13:HG3_PB_SVrefine2PBcRDovetail_11:HG2_PB_SVrefine2Falcon2Bionano_8:HG2_PB_SVrefine2PBcRplusDovetail_12;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_17:HG2_PB_SVrefine2PBcRplusDovetail_12;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0929095;ClusterMaxSizeDiff=0.0831296;ClusterMaxEditDist=0.389873;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=196;DistBack=3113;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=613;REFWIDENED=1:931635-932247;PctSeqSimilarity=0.9812;PctSizeSimilarity=0.9849;PctRecOverlap=0.5226;SizeDiff=-3;StartDistance=-94;EndDistance=-94;GTMatch=0;TruScore=82;MatchId=1.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:29:./.:0:0:0:2:./.:0:0:0:0:0/1:10:6:./.:.:.:.:.:.
chr1	1501010	HG2_Ill_svaba_28	G	GTGGCTCCATGGGAACCGAGACCCAACACCCAAAGGAGTCCCACAGGCTCAGGGGTGGTGCAGGCAGAGAACAGACGTCGCGATGGGCCCGACGGTGC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_25:HG2_PB_HySA_62:HG4_Ill_GATKHCSBGrefine_15:HG2_Ill_GATKHC_31:HG2_Ill_GATKHCSBGrefine_9:HG4_Ill_SVrefine2DISCOVARDovetail_12:HG2_Ill_SVrefine2DISCOVARplusDovetail_15:HG2_10X_SVrefine210Xhap12_15:HG2_PB_pbsv_30:HG2_PB_HySA_61:HG4_Ill_svaba_35:HG4_Ill_Krunchall_23:HG4_Ill_250bpfermikitraw_25:HG2_Ill_svaba_28:HG2_Ill_Krunchall_20;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25:HG4_Ill_svaba_35:HG4_Ill_Krunchall_23:HG4_Ill_250bpfermikitraw_25:HG2_Ill_svaba_28:HG2_Ill_Krunchall_20;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0310881;ClusterMaxSizeDiff=0.0206186;ClusterMaxEditDist=0.237113;PBcalls=3;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=97;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=118;REFWIDENED=1:1501001-1501118;PctSeqSimilarity=0.9934;PctSizeSimilarity=0.9897;PctRecOverlap=0.4433;SizeDiff=1;StartDistance=-54;EndDistance=-54;GTMatch=0;TruScore=80;MatchId=3.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:32:0|1:22:0:2:28:1|0:1:11:7:0:0/1:17:20:./.:.:.:.:.:.
chr1	1860802	HG2_PB_SVrefine2PB10Xhap12_34	C	CGGGAGGGGGAGAGGGTGGGGGGAGGGGACAGGTCTGGGGAGGCAGGAGAGAGGGTGAGGGGAGGCAGGGGAGATGGTGAGGGGAGGGAGGGGAGGGGAGGAGGGAGAGGGTGGGGAGGGAGGGGAGAGGGTAGGGGAGGGAGGAAGAGGAGGGGAGAGGGTAGGGAGGGAGAGGAGGGGAGAAGGGAGGGGACGCAGGGAGGGGAGAGGAAAGAGGAGGGAGGGAGAGGGGAGGGAGGGGAGCGGGTAGGGGAGGGAAGGAGGGGAAATGGTATGGGAGGGAGGGAGGGGAGAGGGTAGGGGAGAGAGGGAGCAGAGGGGAAAGGGTAGGGGAGGGAAGGAAGGGAGAGGGTAGGGGAGGTAGGGAGGGAGGGGAGAGGGTAGGGGAGGGGAGAGGGTAGGGGAGGGGAGAGGGTAGGGGAGGGAAGGAGGGGAGACGGTAGAGGAGGGAGGAGGGGAGAGGGTAGGGGAGGGAGGAAGAGGAGGGGAGAGGGTAGGGAGGGAGGGAGAGGAGAGGGGAGGGAGGGGAGGAGGGGAGAGGGTAGGGAGGGAGGGGAGGAGGGAAGAGGGTAGGGAGGGAGGGAGAGGAGAGGGGAGGGAGGGAGGGGAGGAGGGGAGAGGGTGGGGAGGAGGGGAGAGGAGGGGAGGGAGGGAGAGGAGGGGAGAGGGTAGGGGAGGGAAGGAGGGGAGAGGGTAGAGGAGGGAGGAGGGGAGAGGGGAGAGGAGGGAGGAGGGGAGAGGGAGGGAGGGAGGAGAGGAGGGGGAGGGAGGGAGGAGGGGAGAGGGAGGGAGGGAGGGGAGGAGGGGAGAGGGTAGGGAGGGAGGGAGAGGAGGAGGGGAGGGAGGGGAGGAGGGGAGAGGGTAGGGAGGGAGGGAGAGGAGAGGGGAGGGAGGGAGGGGAGGAGGGGAGAGGGTAGGGAGGGAGGGAGAGAGGAGGGAGGGAGGGCAGGAGGGGAGAGGGTAGGGAGGGAGGGCAGGAGGGGAGAGGGTAGGGAGGAGGGGAGAGGAGGGGAGGAGGGAGGAGGGAGAGGTAGGGAGGGGAGGAGGGAGAGGGTA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_30:HG4_PB_pbsv_38:HG3_PB_HySA_56:HG2_PB_HySA_76:HG3_PB_pbsv_37:HG3_PB_SVrefine2Falcon1Dovetail_31:HG2_PB_pbsv_36:HG2_PB_SVrefine2PB10Xhap12_34:HG3_PB_SVrefine2PBcRDovetail_26:HG2_PB_SVrefine2Falcon2Bionano_24:HG2_PB_SVrefine2PBcRplusDovetail_29:HG2_PB_SVrefine2Falcon1plusDovetail_34;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_34;NumExactMatchSVs=1;ClusterMaxShiftDist=0.105461;ClusterMaxSizeDiff=0.105461;ClusterMaxEditDist=0.220994;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1055;DistBack=5080;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=89;REFWIDENED=1:1860803-1860891;PctSeqSimilarity=0.9653;PctSizeSimilarity=0.9782;PctRecOverlap=0.9697;SizeDiff=23;StartDistance=-21;EndDistance=-21;GTMatch=1;TruScore=97;MatchId=4.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:34:1/1:0:13:0:20:./.:0:4:0:6:./.:0:7:0/1:12:37:.:.:.
chr1	1880386	HG2_Ill_SVrefine2DISCOVARplusDovetail_18	T	TCCTTCCCTTTCCCTCCCTCCCTTCCTTCCTCTTTCCTTCCTTCCTTTCCCTCCCTTACTCCTTCCTTCCTTCCCTTCCCCTTCCTTCTTCCTTCTCTCCCTCCCTCCCTTC	20	PASS	ClusterIDs=HG3_PB_pbsv_39:HG3_Ill_MetaSV_10:HG3_PB_SVrefine2PBcRDovetail_28:HG3_Ill_SVrefine2DISCOVARDovetail_13:HG2_PB_SVrefine2Falcon2Bionano_26:HG2_Ill_SVrefine2DISCOVARplusDovetail_18:HG2_10X_SVrefine210Xhap12_18:HG3_PB_SVrefine2Falcon1Dovetail_33:HG4_Ill_GATKHCSBGrefine_20:HG4_PB_HySA_58:HG2_PB_HySA_77:HG4_Ill_MetaSV_9:HG2_PB_pbsv_38;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_18:HG2_Ill_SVrefine2DISCOVARplusDovetail_18:HG2_PB_SVrefine2Falcon2Bionano_26:HG3_Ill_SVrefine2DISCOVARDovetail_13:HG3_PB_SVrefine2PBcRDovetail_28;NumExactMatchSVs=5;ClusterMaxShiftDist=0.163462;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.307692;PBcalls=7;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=111;DistBack=-1;DistForward=83;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=304;REFWIDENED=1:1880314-1880617;PctSeqSimilarity=0.9914;PctSizeSimilarity=0.991;PctRecOverlap=0.955;SizeDiff=1;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=97;MatchId=5.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:23:0|1:21:0:2:24:0|1:29:1:1:22:0/1:15:8:./.:.:.:.:.:.
chr1	1925143	HG2_10X_SVrefine210Xhap12_21	A	AGGGCACAGTGGCTCATGCCTGTAATCCCAGCAACATGGGAGCCTGAGGTGGGAGGCTCTCTTGAGGCCAGGAGTTTGAGACCAGCCTGGGCAACATAGTGAGACCCCCCACCCCCCGCCATTTCTAGGAAAAAAAAAAAAAGTGGCC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_10:HG3_PB_pbsv_41:HG4_Ill_GATKHCSBGrefine_25:HG4_PB_pbsv_45:HG2_PB_HySA_80:HG4_PB_HySA_61:HG2_PB_SVrefine2Falcon1plusDovetail_37:HG4_PB_SVrefine2Falcon1Dovetail_32:HG2_PB_SVrefine2Falcon2Bionano_27:HG4_PB_SVrefine2PBcRDovetail_20:HG4_Ill_SVrefine2DISCOVARDovetail_15:HG4_Ill_GATKHCSBGrefine_24:HG3_PB_SVrefine2PBcRDovetail_29:HG3_PB_SVrefine2Falcon1Dovetail_34:HG3_Ill_Spiral_24:HG3_Ill_SVrefine2DISCOVARDovetail_16:HG3_Ill_GATKHCSBGrefine_14:HG2_PB_SVrefine2PBcRplusDovetail_31:HG2_PB_SVrefine2PB10Xhap12_37:HG2_Ill_SVrefine2DISCOVARplusDovetail_20:HG2_Ill_GATKHCSBGrefine_14:HG2_Ill_150bpfermikitraw_27:HG2_10X_SVrefine210Xhap12_21:HG2_PB_PB10Xdip_683:HG2_PB_PB10Xdip_682;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_21:HG2_Ill_150bpfermikitraw_27:HG2_Ill_GATKHCSBGrefine_14:HG2_Ill_SVrefine2DISCOVARplusDovetail_20:HG2_PB_SVrefine2PB10Xhap12_37:HG2_PB_SVrefine2PBcRplusDovetail_31:HG3_Ill_GATKHCSBGrefine_14:HG3_Ill_SVrefine2DISCOVARDovetail_16:HG3_Ill_Spiral_24:HG3_PB_SVrefine2Falcon1Dovetail_34:HG3_PB_SVrefine2PBcRDovetail_29:HG4_Ill_GATKHCSBGrefine_24:HG4_Ill_SVrefine2DISCOVARDovetail_15:HG4_PB_SVrefine2PBcRDovetail_20;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0797342;ClusterMaxSizeDiff=0.0598007;ClusterMaxEditDist=0.321311;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=147;DistBack=11424;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:1925144-1915427;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=6.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:46:1/1:4:20:0:14:1/1:0:17:0:26:1/1:0:17:./.:.:.:.:.:.
chr1	1950659	HG2_PB_PB10Xdip_684	C	GGGGGGCGGGGGGAGGAGAGGGGGGAGAGGGGAGGGGACCGGGTAGGGTGGGGGGGGAGGGGAACGGGGAGGGGAGCGGCGGGCGCGGGGTGGGGGGGGAGGGGGAGGGGGGAGGGGAGAAGACGGGCAGCGGGAGGGGCGGGGGGGAGGGGATGGGGGCGGGGGGGAGGGGAGGGGGCGGCGGGGAGGGGATGGGGGCGGGGGGGAGGGGATGGGCGGGGGGGAGGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_38:HG2_PB_HySA_82:HG2_PB_HySA_81:HG4_PB_pbsv_46:HG2_PB_PB10Xdip_685:HG4_PB_HySA_62:HG2_PB_PB10Xdip_684:HG2_PB_pbsv_41:HG2_PB_SVrefine2PBcRplusDovetail_32:HG2_PB_SVrefine2PB10Xhap12_38:HG2_PB_SVrefine2Falcon2Bionano_28:HG3_PB_SVrefine2PBcRDovetail_30:HG3_PB_SVrefine2Falcon1Dovetail_35:HG4_PB_SVrefine2PBcRDovetail_21:HG4_PB_SVrefine2Falcon1Dovetail_33;NumClusterSVs=15;ExactMatchIDs=HG2_PB_PB10Xdip_684:HG2_PB_PB10Xdip_685;NumExactMatchSVs=2;ClusterMaxShiftDist=0.183406;ClusterMaxSizeDiff=0.183406;ClusterMaxEditDist=0.266667;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=229;DistBack=-23;DistForward=24947;DistMin=-23;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=1:1950645-1950682;PctSeqSimilarity=0.9978;PctSizeSimilarity=0.9957;PctRecOverlap=0.9913;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=7.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:4:28:1/1:1:7:1:5:./.:1:1:0:5:./.:2:2:./.:.:.:.:.:.
chr1	2017166	HG2_PB_SVrefine2Falcon1plusDovetail_39	G	GTGAGGCACCGTGCTGGAGGGGCTGAGGACGTCGGGGGGCCCTGTTCTCAGAGCCCATGAGGTACCGTGCTGGAGGGGCTGAGGACGTCGGGGGGCCCTGTTCTCAGAGCCCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_29:HG2_PB_HySA_84:HG2_PB_SVrefine2Falcon1plusDovetail_39:HG2_PB_pbsv_42:HG3_PB_pbsv_44:HG4_PB_pbsv_47;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_39;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147186;ClusterMaxSizeDiff=0.147186;ClusterMaxEditDist=0.331915;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=112;DistBack=-98;DistForward=-1;DistMin=-98;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=274;REFWIDENED=1:2016989-2017262;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=8.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:21:0|1:27:1:1:19:./.:3:0:2:0:0/1:12:2:./.:.:.:.:.:.
chr1	2332845	HG4_PB_SVrefine2Falcon1Dovetail_39	C	CCCTCCTCTCCTCCTTCCTCCTCTCCTCCTCCTCCTCCCTCCTCCTTCTTCCTCCTCCTCCCTTCTCCTCCTCCCTCCCCCTCCTCCCTCCCTCCTCCTCCCTCCCCTTCCCTCCTTCCTCCCTCCTCCTCCTCTCTCCTTCTCCCTCCTCCTTCCTCCCTTCCTCCCTCCTCTCCCTCCTTCCTCTCCTCCTCCTCCCTCCTTCCTCCTCCTCCTCCTCTCCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_49:HG3_PB_pbsv_53:HG4_PB_SVrefine2PBcRDovetail_25:HG4_PB_pbsv_55:HG2_PB_PB10Xdip_1141:HG4_PB_SVrefine2Falcon1Dovetail_39:HG4_PB_assemblyticsfalcon_63:HG2_PB_PB10Xdip_1142:HG2_PB_pbsv_54:HG2_PB_SVrefine2Falcon2Bionano_34:HG3_PB_SVrefine2Falcon1Dovetail_42:HG3_PB_SVrefine2PBcRDovetail_36:HG2_PB_SVrefine2PBcRplusDovetail_38:HG2_PB_SVrefine2PB10Xhap12_45;NumClusterSVs=14;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_39;NumExactMatchSVs=1;ClusterMaxShiftDist=0.214141;ClusterMaxSizeDiff=0.214141;ClusterMaxEditDist=0.293333;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=223;DistBack=29;DistForward=34900;DistMin=29;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=227;REFWIDENED=1:2332642-2332868;PctSeqSimilarity=0.9227;PctSizeSimilarity=0.8814;PctRecOverlap=0.6838;SizeDiff=-30;StartDistance=65;EndDistance=65;GTMatch=1;TruScore=82;MatchId=12.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:41:1/1:3:26:2:10:./.:5:9:8:5:./.:3:0:./.:.:.:.:.:.
chr1	2533554	HG4_Ill_Krunchall_41	G	GTTCTTAGAGTCAGAGGCCACTCAGCAATCTAGAGGCCACGTCAGGGACCAGCCTCCCTCCAGGTAGAAGTCAGGTTCGTC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_35:HG4_Ill_GATKHC_65:HG4_Ill_GATKHCSBGrefine_32:HG3_Ill_GATKHC_58:HG3_Ill_GATKHCSBGrefine_24:HG2_Ill_GATKHC_58:HG2_Ill_GATKHCSBGrefine_24:HG4_Ill_Krunchall_41:HG3_PB_assemblyticsfalcon_77:HG4_Ill_GATKHCSBGrefine_31:HG4_PB_pbsv_60:HG4_Ill_250bpfermikitraw_44:HG3_Ill_GATKHCSBGrefine_23:HG3_Ill_250bpfermikitraw_45:HG2_Ill_Krunchall_38:HG2_Ill_GATKHCSBGrefine_23:HG2_Ill_250bpfermikitraw_44;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_35:HG4_Ill_Krunchall_41:HG4_Ill_GATKHCSBGrefine_31:HG4_Ill_250bpfermikitraw_44:HG3_Ill_GATKHCSBGrefine_23:HG3_Ill_250bpfermikitraw_45:HG2_Ill_Krunchall_38:HG2_Ill_GATKHCSBGrefine_23:HG2_Ill_250bpfermikitraw_44;NumExactMatchSVs=9;ClusterMaxShiftDist=0.210526;ClusterMaxSizeDiff=0.184211;ClusterMaxEditDist=0.263158;PBcalls=2;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=80;DistBack=9506;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=83;REFWIDENED=1:2533555-2533637;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=13.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:19:./.:12:10:12:13:./.:0:13:4:0:0/1:13:14:./.:.:.:.:.:.
chr1	2954348	HG3_Ill_250bpfermikitraw_53	A	ACCTGGGTCTCGTCTGCCACGGATTGCTCTCCGTGCTCCCCAGAGCGAGGTGCAGATGCCAGGGACCCTCTC	20	PASS	ClusterIDs=HG3_PB_HySA_91:HG2_PB_HySA_122:HG3_Ill_scalpel_38:HG3_Ill_Krunchall_40:HG3_Ill_GATKHC_78:HG3_Ill_GATKHCSBGrefine_31:HG3_Ill_250bpfermikitraw_53:HG2_Ill_Krunchall_45:HG2_Ill_GATKHC_73:HG2_Ill_250bpfermikitraw_54:HG2_Ill_150bpfermikitraw_42;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_42:HG2_Ill_250bpfermikitraw_54:HG2_Ill_GATKHC_73:HG2_Ill_Krunchall_45:HG3_Ill_250bpfermikitraw_53:HG3_Ill_GATKHCSBGrefine_31:HG3_Ill_GATKHC_78:HG3_Ill_Krunchall_40:HG3_Ill_scalpel_38;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0137931;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0273973;PBcalls=2;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=8541;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=144;REFWIDENED=1:2954315-2954458;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=15.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:0|1:26:3:4:23:./.:12:0:2:7:0/1:26:13:./.:.:.:.:.:.
chr1	3092611	HG2_PB_SVrefine2PBcRplusDovetail_52	T	TCATCCATCCATCCAACCATCCATCCATCCATCCATCCACCCATTGATTCACCTACCCATCCATTCATCCATTCCTTCATTAACCCATCCATGCACTCATTCATCTATCCATCCATCCATCCATCCATCCATCCATCTATCCATCCATCCATTTACCCATCTATCCCCTCATCTATCCACCAAGCCATTCATCCACCTATCTATGCATTCATCCACCATCTGTCCATC	20	PASS	ClusterIDs=HG4_PB_HySA_89:HG2_PB_pbsv_76:HG3_PB_pbsv_79:HG4_PB_pbsv_78:HG2_PB_HySA_129:HG2_PB_HySA_128:HG3_PB_HySA_97:HG2_Ill_250bpfermikitraw_59:HG2_PB_PB10Xdip_2051:HG2_PB_PB10Xdip_2050:HG4_PB_SVrefine2PBcRDovetail_42:HG4_PB_SVrefine2Falcon1Dovetail_55:HG4_Ill_SVrefine2DISCOVARDovetail_32:HG3_Ill_SVrefine2DISCOVARDovetail_31:HG2_PB_SVrefine2PBcRplusDovetail_52:HG2_PB_SVrefine2PB10Xhap12_66:HG2_PB_SVrefine2Falcon2Bionano_49:HG2_Ill_SVrefine2DISCOVARplusDovetail_40:HG3_PB_SVrefine2PBcRDovetail_50:HG2_PB_SVrefine2Falcon1plusDovetail_68:HG3_PB_SVrefine2Falcon1Dovetail_64;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_40:HG2_PB_SVrefine2Falcon2Bionano_49:HG2_PB_SVrefine2PB10Xhap12_66:HG2_PB_SVrefine2PBcRplusDovetail_52:HG3_Ill_SVrefine2DISCOVARDovetail_31:HG4_Ill_SVrefine2DISCOVARDovetail_32:HG4_PB_SVrefine2Falcon1Dovetail_55;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0938166;ClusterMaxSizeDiff=0.0895522;ClusterMaxEditDist=0.198731;PBcalls=17;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=227;DistBack=8377;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=243;REFWIDENED=1:3092612-3092854;PctSeqSimilarity=0.9808;PctSizeSimilarity=0.9498;PctRecOverlap=0.5356;SizeDiff=-12;StartDistance=-105;EndDistance=-105;GTMatch=0;TruScore=82;MatchId=16.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:45:1/1:0:10:1:11:1/1:1:150:1:71:1/1:0:15:./.:.:.:.:.:.
chr1	3268081	HG2_PB_pbsv_87	G	GGGGAAACCTCGCGTCTGCTCCGCCCTCCTCTCTGTCGCCCTCCTCTCTCCCCTCCCTCTCTCCCCCTCCCTCTCTCCCCCTCCCTCTCTCCCCCTCCCTCTCTCCCCCTCTCTCTCCCCCACCTCCCCCCTCCTCTCTCACCGCCTCTTCTCTTCCCTCTCTTCCTTCGTGCCCCCCTCTCGTCCCATCACTCTTTCCCGCCGCCTTACCCCCTCCTTCTCTCTCCCCTTCCCTCTCTTCCCCCCTTCTGTCACCCCTCCCTCTCTCATCCCCTTCTCTTTCTCGCTCTCCCTCTCACTTCCCCTTCCCTCCCACTCTCCCCTTCACTCTCTCCCCTTTCCTCAACCTCTCTCCCTTATCTCTCTTCTGCTCCTTCTCTCTCCCCTTCCTCTACTTCCCCTCCCTCTCTGTCCCCCTCCCTCTCTCATCCCCTTCCTCTTTCTCTCCCCTTCTTCCCTCCCTTCCCTTTCTCCTCACCCTCTGTCCGATCCACTCTCTCGCGCCTCGCCTGGTCCGATACCTGCTTCCCCTGCACCTCTTCCCTCCCTCTCCTCCCCTTCGCGTCTCTCCCCCTCCTCTCTCCCTCCCTCTCTCCCTCCTTTTCTCCCCTCCT	10	PASS	ClusterIDs=HG2_PB_pbsv_87:HG3_PB_HySA_106:HG4_PB_pbsv_91:HG3_PB_SVrefine2Falcon1Dovetail_70:HG3_PB_SVrefine2PBcRDovetail_58:HG2_PB_SVrefine2PB10Xhap12_73:HG4_PB_SVrefine2Falcon1Dovetail_60:HG2_PB_SVrefine2PBcRplusDovetail_59:HG2_PB_SVrefine2Falcon1plusDovetail_75:HG2_PB_SVrefine2Falcon2Bionano_56:HG3_PB_pbsv_88;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_87;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0831296;ClusterMaxSizeDiff=0.0831296;ClusterMaxEditDist=0.213312;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=613;DistBack=5690;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:3268082-3268082;PctSeqSimilarity=0.9179;PctSizeSimilarity=0.9984;PctRecOverlap=0.987;SizeDiff=-1;StartDistance=-7;EndDistance=-7;GTMatch=1;TruScore=96;MatchId=17.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:40:1/1:1:18:0:20:./.:7:32:9:29:0/0:8:0:0/1:6:26:.:.:.
chr1	3393857	HG2_PB_pbsv_89	A	ACCCCCAATCCCCCCGTCACCCCCACACTGACCGGCACCCCATCACCCACAACCCACCCCCATCACCAACCCACACTACCCACCCCCATCACCCCACACGTACCCACCCATCACCCCGACACTACCCACCCCCATCACCCCACAGCTACCCACCTCATCACCCCATAAACTACCCATCCATCACCCCCACACGACCGCACCCGCCATCAACCAACTAACCACCATCACCCCCACACTACCCACCCCCATCACCCACACAGACCACCCATCACCCCCACACTACCCACCCCCATACCACACTACCACCCCCATCACCCACACTACCCACCCCCATCACCCCACAACTACCCACGTCCCATCACCCCCACACTACCCACCCCAACCCACACTACCCCACCCTCATCACCCCAACACATACCCACCACACCCCCACAGCTGGAGACGACCCACCCCCATCACCCACACTACCCACCCCATCACCACACTACCCACCCCCCATCACCCCACACTACCCACCCATCATCCCCCACACTACCCACCCCCATCACCCCACACTACCACTCCCCATCACCCCACTAACCCACTCCCATCACCCCCACACTACCCACCCATCACCCCACACACCCACCCCCTCACCCCACACTACCCACCCCATCACCCCACACCTACACCCCCATCACCCACACTGGTACCACCCCATCCACCCCACACTAACCCACCCCATCAACCCACACTAACCCACCCCATCACCCCACACTACCCCACATCCCATTCACCCCACACTAACCCACCCCATCACCCCCCACACTACCCACCCCATCACCCGCACACTACCACGACCCACCCCCATCACCGCACACTACCCACCCCCATCACCCCACACTACCCCCCCCATCACCCCCCACACTACCCACCCCATCACCCCCCAACACTGAACCACCCCATCACCCCACACTACCCATCCCCATCACCCCCCACACGACCCACCCCATCACCCCAACGACCCACCCATCACCCTCACTACCCACCCCATCACCCCAACACTACCCACCCGCATCACCCCACACTACCCACCCCCATCACCCCACACGACCCACCGCCTAATCAACCCACAACTACCCCCCATCACCCCCACACTAACCATCCCCATCACCCCCACACGACCCACCCCATCAACCCCACACTACCCACCCATCACCCCACACTACCGCACCCATCACCCTCACTACCCACCCCATCACCCCACACTACCCCCGCATCACCCCCAACATAACCCACGCCCCATCACCCTCACTACCCACCCCATCACACCCACACTACCTCACCCCTCACCCCAACTACCACACCATCACCCCACACTACCACCCATCACTCACTACCCACCCATCACCCGCACACTACCCACCCCCATCACCCCCACACTACCCACCCCCATCACCCCCACCACTACCCCCACCCATCACCCACACTTACCACCCCAAGCACCCTCACTACCACCCCACACCGCCCACTACCCATCCCCATCACCCCACACTACCCCCCCATCACCCCCACACCATAACCCACCCCATCCCACCCCACACTACCCCCCATCACCACACCTACCACCCCATCACCCACATACCACCCCATCACCCCCACACTACCCACCCCCATACCCCACACTAACACCCCATCAACCGCCCACACTACCCACCCCCATCACCCCCATACCACCCCACACCCCCACACTAAACCCCACCCCATCAGCCGCCACTACCCACCCCCATCACCCTCACTACCCACCATCACCCCACACAACCCCCCCATCACCCCCACACTACCCCCCATCAGCCCCACACTACCCACCCCCATCACCCCAACTACCCACCCCAAATCACCCTCACTACCATCACCCGCACACTAACCCACCCCCCATCACCGCGCACACGTACCCAGGCCCATCACCCCGCTACCCACCCCATCACCCCACGCCACCCACCGCCATCACCCCACGCCGCCCCGCCCATCACCCCCACGCCGCCCCCCATCACCCCCACGGCCGCCCACACCATCACCCCCCACGCGCCCACCCCATCACCCCACGCCGCCCACCCCATCACCCCCACGGGGTGTGGCCGCCCACATCCCATCACCCCCGAGCAGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_59:HG2_PB_PB10Xdip_2095:HG4_PB_pbsv_93:HG2_PB_HySA_151:HG2_PB_HySA_150:HG2_PB_assemblyticsfalcon_114:HG2_PB_pbsv_89:HG2_PB_SVrefine2Falcon1plusDovetail_77:HG2_PB_SVrefine2PBcRplusDovetail_61:HG2_PB_SVrefine2PB10Xhap12_76;NumClusterSVs=10;ExactMatchIDs=HG2_PB_pbsv_89;NumExactMatchSVs=1;ClusterMaxShiftDist=0.130906;ClusterMaxSizeDiff=0.130445;ClusterMaxEditDist=0.247489;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2146;DistBack=1541;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=1:3393858-3393896;PctSeqSimilarity=0.9385;PctSizeSimilarity=0.9889;PctRecOverlap=0.9889;SizeDiff=-24;StartDistance=-10;EndDistance=-10;GTMatch=1;TruScore=97;MatchId=18.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:69:1/1:1:12:0:9:./.:34:6:9:6:0/1:7:3:1/1:2:35:.:3770:.
chr1	3495309	HG2_Ill_150bpfermikitraw_55	G	GCACCCAGCTCAGAACTCTGGGGAGACCCAGCACCTCTGCAGAACCCCTCCTCAGCCTGGTCCCCAGCAGAACGTGGAGTGGGCAGGAGTGT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_55:HG2_PB_assemblyticsfalcon_117:HG4_PB_assemblyticsfalcon_102:HG2_PB_SVrefine2Falcon1plusDovetail_79:HG4_PB_SVrefine2Falcon1Dovetail_63:HG2_PB_pbsv_91:HG4_PB_HySA_115:HG4_PB_pbsv_96:HG2_PB_PB10Xdip_2101:HG3_PB_pbsv_95:HG3_PB_HySA_110:HG2_PB_HySA_154:HG3_Ill_GATKHC_95:HG3_Ill_GATKHCSBGrefine_35:HG3_Ill_150bpfermikitraw_52:HG2_Ill_GATKHC_90:HG2_Ill_GATKHCSBGrefine_38:HG2_Ill_250bpfermikitraw_70;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_55:HG3_Ill_GATKHC_95:HG3_Ill_GATKHCSBGrefine_35:HG3_Ill_150bpfermikitraw_52:HG2_Ill_GATKHC_90:HG2_Ill_GATKHCSBGrefine_38:HG2_Ill_250bpfermikitraw_70;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0874317;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.282723;PBcalls=11;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=91;DistBack=1977;DistForward=180;DistMin=180;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=183;REFWIDENED=1:3495310-3495492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=19.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:35:1/1:1:6:1:21:./.:1:6:1:2:0/1:10:9:./.:.:.:.:2484:.
chr1	3504404	HG2_PB_SVrefine2Falcon1plusDovetail_81	A	AAGGGGACAGGAGGGGCCAGGAGGGGACAGGAGTGGCCAGGAGGGGACAGGAGTGGCTAGGAGGAGACAGGACCGGCCAGGAGTGGCCAGGAGTGGACAGGAGGAGACAGGAGGGGACAGGAGTGGATAGGAGGAGATAGGAGGGGACAGGAGTGGACAGAAGGAGACAGGAGGGGACAGGAGTGGACAGGAGACAGGAGGGGACAGGAATGGCCAAGAGGGGACAGGAGTGGCCAGGAGGGGCAGAAGTGGCCAGGAGTGGGCAGGAGGGGGCAGGACAGGCCAGGAGGAGGCAGGAGGGGGCAGGAGGGGACAGGAGGGGCAGGAGGGGACAGGAGGGGCAGGAGTGGCCAGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_75:HG4_PB_pbsv_98:HG4_PB_HySA_121:HG3_PB_pbsv_97:HG2_PB_SVrefine2Falcon2Bionano_62:HG2_PB_SVrefine2Falcon1plusDovetail_81:HG2_PB_SVrefine2PB10Xhap12_79:HG4_PB_SVrefine2Falcon1Dovetail_65;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_81;NumExactMatchSVs=1;ClusterMaxShiftDist=0.155705;ClusterMaxSizeDiff=0.15302;ClusterMaxEditDist=0.21745;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=354;DistBack=-8584;DistForward=-1;DistMin=-8584;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=731;REFWIDENED=1:3504405-3505135;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9916;PctRecOverlap=0.9496;SizeDiff=-3;StartDistance=-17;EndDistance=-17;GTMatch=1;TruScore=97;MatchId=20.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:12:37:1/1:6:20:1:9:./.:0:16:2:10:0/1:6:8:0/1:4:23:.:2484:.
chr1	3512987	HG2_PB_SVrefine2PBcRplusDovetail_66	G	GCCACCTCAGGGCACCCTGCCAAGCCCCCATCTCCACCCCAGGGCACCCCGCGCCATCCCCTGCCCAGCCCCCGTCTCCACCCCAGGGCACCCCGCGCCATCCCCTGCCCAGCCCCCGTCTCCACCCCAGGGCACCCCGCGCCATCCCCTGCCCAGCCCCCGTCTCCACCCCAGGGCACCCTGCGCCATCCCCTGCCCAGCCCCCGTCTCCACCCCAGGGCACCCTGCGCCATCCCCTGCCCAGACCCCGTCTCCACCCCAGGGCACCCCGCGCCATCCCCTGCCCAGCCCCCGTCTCCACCCCAGGGCACCCTGCGCCATCCCCTGCCCAGCCCCCGTCTCCACCCCAGGGCACCCTGCGCCATCCCTGCCCAGACCCCGTCTCCACCCCAGGGCACCCTGCGCCATCCCCTGCCCAGCCCCCGTCTCCACCCCAGGGCACCCTGCGCCATCCCCTGCCCAGACCCCGTCTCCACCCCAGGGCACCCCGCGCCATCCCCTGCCCAGCCCCCGTCTCCACCCCAGGGCACCCTGCGCCATCCCCTGCCCAGCCCCCGTCTCCACCCCAGGGCACCCTGCGCCATCCCCTGCCCAGACCCCGTCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_66:HG4_PB_pbsv_100:HG2_PB_PB10Xdip_2130:HG2_PB_pbsv_95:HG2_PB_HySA_158:HG2_PB_SVrefine2Falcon2Bionano_63:HG2_PB_SVrefine2Falcon1plusDovetail_82:HG2_PB_SVrefine2PB10Xhap12_80:HG4_PB_SVrefine2Falcon1Dovetail_67;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_66;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0455285;ClusterMaxSizeDiff=0.0357724;ClusterMaxEditDist=0.210273;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=603;DistBack=4600;DistForward=32;DistMin=32;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=314;REFWIDENED=1:3512988-3513301;PctSeqSimilarity=0.9866;PctSizeSimilarity=0.9789;PctRecOverlap=0.8898;SizeDiff=-13;StartDistance=-61;EndDistance=-61;GTMatch=0;TruScore=95;MatchId=21.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:28:./.:8:15:8:2:./.:6:0:4:5:0/1:11:6:0/1:5:10:.:.:.
chr1	3714245	HG2_Ill_250bpfermikitraw_76	T	TTAATTTTTATATTAACCGTGTTAATATAATTTTTATATTAACCGTGTTAATA	20	PASS	ClusterIDs=HG4_PB_pbsv_106:HG2_PB_HySA_169:HG2_PB_pbsv_103:HG4_PB_assemblyticsfalcon_113:HG4_Ill_svaba_85:HG4_Ill_Krunchall_60:HG4_Ill_GATKHC_106:HG4_Ill_GATKHCSBGrefine_63:HG4_Ill_250bpfermikitraw_71:HG4_Ill_150bpfermikitraw_58:HG3_Ill_svaba_83:HG3_Ill_Spiral_47:HG3_Ill_SVrefine2DISCOVARDovetail_37:HG3_Ill_Krunchall_54:HG3_Ill_GATKHCSBGrefine_38:HG3_Ill_250bpfermikitraw_73:HG3_Ill_150bpfermikitraw_56:HG2_PB_SVrefine2PBcRplusDovetail_71:HG2_PB_SVrefine2PB10Xhap12_86:HG2_PB_SVrefine2Falcon2Bionano_67:HG2_PB_SVrefine2Falcon1plusDovetail_86:HG2_Ill_svaba_80:HG2_Ill_SpiralSDKrefine_46:HG2_Ill_SVrefine2DISCOVARplusDovetail_52:HG2_Ill_Krunchall_59:HG2_Ill_GATKHC_98:HG2_Ill_GATKHCSBGrefine_44:HG2_Ill_250bpfermikitraw_76:HG2_Ill_150bpfermikitraw_60:HG2_10X_SVrefine210Xhap12_64:HG2_PB_PB10Xdip_2136:HG2_PB_PB10Xdip_2135:HG2_Ill_breakscan11_2926:HG3_PB_pbsv_104;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_64:HG2_Ill_150bpfermikitraw_60:HG2_Ill_250bpfermikitraw_76:HG2_Ill_GATKHCSBGrefine_44:HG2_Ill_GATKHC_98:HG2_Ill_Krunchall_59:HG2_Ill_SVrefine2DISCOVARplusDovetail_52:HG2_Ill_SpiralSDKrefine_46:HG2_Ill_svaba_80:HG2_PB_SVrefine2Falcon1plusDovetail_86:HG2_PB_SVrefine2Falcon2Bionano_67:HG2_PB_SVrefine2PB10Xhap12_86:HG2_PB_SVrefine2PBcRplusDovetail_71:HG3_Ill_150bpfermikitraw_56:HG3_Ill_250bpfermikitraw_73:HG3_Ill_GATKHCSBGrefine_38:HG3_Ill_Krunchall_54:HG3_Ill_SVrefine2DISCOVARDovetail_37:HG3_Ill_Spiral_47:HG3_Ill_svaba_83:HG4_Ill_150bpfermikitraw_58:HG4_Ill_250bpfermikitraw_71:HG4_Ill_GATKHCSBGrefine_63:HG4_Ill_GATKHC_106:HG4_Ill_Krunchall_60:HG4_Ill_svaba_85:HG4_PB_assemblyticsfalcon_113;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0943396;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.222222;PBcalls=11;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=52;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=44;REFWIDENED=1:3714246-3714289;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=22.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:44:1/1:2:19:1:16:1/1:0:17:0:16:1/1:0:53:./.:.:.:.:.:.
chr1	3748984	HG2_PB_HySA_172	G	GAACCAGGAGTGTAGTGTAGGTCGTGACCAGGAGTGTAGTGTAGGTCATAACCAGGAGTGTAGTGTAGCACATTAGGTCGTA	20	PASS	ClusterIDs=HG2_PB_HySA_172:HG3_PB_pbsv_108:HG2_Ill_250bpfermikitraw_78:HG2_PB_pbsv_106:HG2_PB_PB10Xdip_2140:HG2_PB_PB10Xdip_2139:HG4_PB_HySA_144;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_172:HG4_PB_HySA_144;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.300578;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=81;DistBack=-25;DistForward=37;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:3748983-3748986;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9877;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=23.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:4:30:1:9:./.:5:2:4:7:0/1:4:12:./.:.:.:.:.:.
chr1	3785147	HG2_PB_SVrefine2PBcRplusDovetail_73	T	TGCCACGCTACACCATACCACACCATACCAGACCACACCACACCAGGCCACACCACACCAAGCCACACCACACCAGGCCACACCACACCAGGCCACGCCACACCAAGCCACACCACACCAGGCCACACCACACCAGGCCACACCACACCATACCACACCACACCAGGCCACACCACACCAGGCCACACCACACCAAGCCACACCACACCAGGCCACACCACACCATACCACACCACACCAGGCCACACCACACCATACCACACCACACCAGGCCACACCACACCAAGCCACACCACACCAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_88:HG4_PB_HySA_145:HG3_PB_HySA_125:HG2_PB_PB10Xdip_2142:HG2_PB_PB10Xdip_2141:HG2_PB_HySA_173:HG2_PB_pbsv_107:HG4_PB_SVrefine2PBcRDovetail_53:HG4_PB_pbsv_110:HG4_PB_SVrefine2Falcon1Dovetail_71:HG3_PB_SVrefine2PBcRDovetail_65:HG3_PB_SVrefine2Falcon1Dovetail_79:HG2_PB_SVrefine2PBcRplusDovetail_73:HG2_PB_SVrefine2PB10Xhap12_89:HG2_PB_SVrefine2Falcon2Bionano_70;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_70:HG2_PB_SVrefine2PB10Xhap12_89:HG2_PB_SVrefine2PBcRplusDovetail_73:HG3_PB_SVrefine2Falcon1Dovetail_79:HG3_PB_SVrefine2PBcRDovetail_65:HG4_PB_SVrefine2Falcon1Dovetail_71;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0705128;ClusterMaxSizeDiff=0.0705128;ClusterMaxEditDist=0.202492;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=300;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=104;REFWIDENED=1:3785148-3785251;PctSeqSimilarity=0.9793;PctSizeSimilarity=0.9677;PctRecOverlap=0.7235;SizeDiff=-10;StartDistance=-81;EndDistance=-81;GTMatch=0;TruScore=89;MatchId=24.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:3:20:1:27:1/1:1:42:0:40:./.:0:4:1/1:1:42:.:.:.
chr1	4396561	HG2_PB_SVrefine2Falcon1plusDovetail_99	T	TGGTGATGATAATGGTGATGGTGATGGTAAACATGATAACGACAATGATAGTGGAAAGCGAATGGTGGTATTGATGGTGATGATGAAGAGGATGGTGATAATAATGATGATGGTGATGATTATGTTGGTGATGATGGTAATGGTGATGATAATGATGGTGATGGTGATGATGATGATTATGTGATGATGGTGGTGATGGTGATGATGGTGATGGTGATGGTGATGGTGGTGATGGTGGTGATGATGATGGTGATGGTGATAATGGTGATGGTGGTGATGATGATGGCGGGGATGTGATGATGATGGTGATGATGATGATGATGGAGATGATGATGATGGTGATGATGATGATGGTGATGATGTGATGACGATGATAGTGATTATGGTGATGGTGATGATGATGATGGTGATGGTGGTGATGGTGATGATGTGATGGTGATGGTGATGATAATAATGATGTGATGGTGATGATGGCGGTGATGTGATGATGATGGTGATGGTGATGATAATGGAGATGATGATGGTGATGATGGTGATGATGTGATGATGACGGTGATGGTGATGATGATGATGGTGATGGTGGTGATGGTAGTGATAATGTGATAATGATGGTGAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2928:HG4_PB_pbsv_123:HG2_PB_HySA_206:HG2_PB_pbsv_120:HG4_PB_HySA_162:HG3_PB_pbsv_120:HG2_PB_HySA_205:HG2_PB_assemblyticsfalcon_142:HG3_PB_assemblyticsfalcon_136:HG4_Ill_GATKHCSBGrefine_67:HG4_Ill_MetaSV_17:HG4_Ill_SVrefine2DISCOVARDovetail_49:HG4_PB_SVrefine2PBcRDovetail_62:HG2_PB_SVrefine2Falcon2Bionano_81:HG4_PB_SVrefine2Falcon1Dovetail_83:HG3_Ill_MetaSV_21:HG2_Ill_MetaSV_15:HG3_PB_SVrefine2PBcRDovetail_73:HG2_PB_SVrefine2PBcRplusDovetail_83:HG2_PB_SVrefine2PB10Xhap12_104:HG3_PB_SVrefine2Falcon1Dovetail_89:HG3_Ill_SVrefine2DISCOVARDovetail_44:HG3_Ill_GATKHCSBGrefine_44:HG2_PB_SVrefine2Falcon1plusDovetail_99:HG2_Ill_SVrefine2DISCOVARplusDovetail_59:HG2_PB_PB10Xdip_2299:HG2_PB_PB10Xdip_2298;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_59:HG2_PB_SVrefine2Falcon1plusDovetail_99:HG3_Ill_GATKHCSBGrefine_44:HG3_Ill_SVrefine2DISCOVARDovetail_44:HG3_PB_SVrefine2Falcon1Dovetail_89;NumExactMatchSVs=5;ClusterMaxShiftDist=0.187302;ClusterMaxSizeDiff=0.187302;ClusterMaxEditDist=0.282844;PBcalls=18;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=615;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=27;REFWIDENED=1:4396562-4396588;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=26.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:23:0:20:1/1:1:111:3:115:1/1:0:8:1/1:1:94:.:2986:.
chr1	4603763	HG2_PB_SVrefine2Falcon2Bionano_82	C	ATCTATCTATCTATCTATCTATTTATCTATTTATCTATCTATCTATCATCTACCTATCTCTCTATCTGTCATCTATCTCTCTGCCTTTGTGTCTATCTACCTATCTCTATCATCTGTCTATCTATTATCTATCTATCTATCTATCTA	20	PASS	ClusterIDs=HG4_PB_HySA_165:HG4_Ill_GATKHCSBGrefine_71:HG2_Ill_GATKHCSBGrefine_53:HG3_Ill_GATKHCSBGrefine_48:HG4_Ill_SVrefine2DISCOVARDovetail_51:HG2_PB_assemblyticsfalcon_148:HG2_PB_SVrefine2Falcon1plusDovetail_100:HG4_PB_SVrefine2PBcRDovetail_63:HG3_PB_assemblyticsfalcon_141:HG3_PB_SVrefine2Falcon1Dovetail_90:HG2_PB_SVrefine2Falcon2Bionano_82:HG2_Ill_SVrefine2DISCOVARplusDovetail_60:HG2_Ill_manta_15:HG2_PB_SVrefine2PB10Xhap12_105:HG2_PB_PB10Xdip_2300:HG2_PB_SVrefine2PBcRplusDovetail_84:HG2_10X_SVrefine210Xhap12_74:HG3_PB_SVrefine2PBcRDovetail_74:HG3_Ill_SVrefine2DISCOVARDovetail_46:HG2_PB_PB10Xdip_2301:HG4_PB_SVrefine2Falcon1Dovetail_84:HG4_Ill_MetaSV_18:HG2_Ill_MetaSV_16:HG3_PB_pbsv_123:HG3_PB_HySA_157:HG4_PB_pbsv_127:HG2_PB_HySA_212;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_60:HG2_PB_SVrefine2Falcon2Bionano_82:HG3_PB_SVrefine2Falcon1Dovetail_90:HG3_PB_assemblyticsfalcon_141:HG4_PB_SVrefine2PBcRDovetail_63;NumExactMatchSVs=5;ClusterMaxShiftDist=0.1875;ClusterMaxSizeDiff=0.176101;ClusterMaxEditDist=0.25387;PBcalls=17;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=146;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=1:4603742-4603762;PctSeqSimilarity=0.997;PctSizeSimilarity=1;PctRecOverlap=0.8503;SizeDiff=0;StartDistance=22;EndDistance=22;GTMatch=1;TruScore=94;MatchId=27.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:69:1/1:4:31:1:37:./.:1:39:3:27:1/1:1:19:./.:.:.:.:.:.
chr1	5135768	HG4_Ill_manta_10	A	AAATTATATATAATACATTATATATAATTATAAATAATGCATTATATATAATTATATATAATGCATTATATAT	20	PASS	ClusterIDs=HG4_PB_pbsv_131:HG3_PB_HySA_173:HG2_PB_HySA_223:HG2_PB_pbsv_128:HG4_PB_HySA_174:HG3_PB_pbsv_127:HG3_PB_assemblyticsfalcon_150:HG3_Ill_scalpel_67:HG3_Ill_manta_12:HG3_Ill_GATKHC_144:HG3_Ill_GATKHCSBGrefine_49:HG3_Ill_150bpfermikitraw_84:HG4_Ill_svaba_112:HG4_Ill_manta_10:HG4_Ill_GATKHC_129:HG4_Ill_GATKHCSBGrefine_73:HG4_Ill_250bpfermikitraw_94:HG3_Ill_svaba_121:HG2_PB_assemblyticsfalcon_160:HG2_Ill_svaba_116:HG2_Ill_manta_16:HG2_Ill_Krunchall_83:HG2_Ill_GATKHC_127:HG2_Ill_GATKHCSBGrefine_54:HG2_Ill_250bpfermikitraw_102:HG2_Ill_150bpfermikitraw_81:HG2_PB_PB10Xdip_2355:HG2_PB_PB10Xdip_2354;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_81:HG2_Ill_250bpfermikitraw_102:HG2_Ill_GATKHCSBGrefine_54:HG2_Ill_GATKHC_127:HG2_Ill_Krunchall_83:HG2_Ill_manta_16:HG2_Ill_svaba_116:HG2_PB_assemblyticsfalcon_160:HG3_Ill_svaba_121:HG4_Ill_250bpfermikitraw_94:HG4_Ill_GATKHCSBGrefine_73:HG4_Ill_GATKHC_129:HG4_Ill_manta_10:HG4_Ill_svaba_112;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0939597;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.291391;PBcalls=10;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=72;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=13;REFWIDENED=1:5135767-5135782;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=28.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:72:1/1:1:34:2:24:./.:0:7:1:2:1/1:1:26:./.:.:.:.:.:.
chr1	5220232	HG2_PB_SVrefine2Falcon2Bionano_87	T	TACTAACACATACACATACACACAAACACATACACACAAACACATACACACACACACTAACACATACACACACTAACACATACACATACTAACACATGCACACACTAACACATACACATACACACATACTAACACATACACACACACTAACACATACACATACATATATACTAACATACACATACACACATACTAACACATACACACACACATACACATACACATACAGATATACTAACACATACACATACACACACTAACATACACATACACACTAACACATACACATACACACATACTAACACATACACACATACTAACACATACACACACACTAACACATACATATATACTAACACATACACATACACATACTAACATACACAAACATACACATACACACATACTAACACATACACACACAAACACATACACATACACACATACACATACACATACACATACACACATACTAACACATACACATACACACATACTAACACATACACATACATATATACTAACACACACTAACACATACACACATACTAACACATACACACACTAACACATACACACACTAACACATACACATACACACATACTAACACATACACAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_79:HG3_PB_pbsv_129:HG3_PB_HySA_177:HG4_PB_pbsv_133:HG4_PB_HySA_180:HG4_Ill_MetaSV_19:HG2_Ill_MetaSV_19:HG2_PB_HySA_225:HG2_PB_PB10Xdip_2368:HG2_PB_PB10Xdip_2367:HG2_PB_pbsv_130:HG3_PB_SVrefine2Falcon1Dovetail_95:HG2_PB_SVrefine2PB10Xhap12_112:HG4_Ill_SVrefine2DISCOVARDovetail_55:HG2_PB_SVrefine2Falcon2Bionano_87:HG2_PB_SVrefine2PBcRplusDovetail_89:HG2_PB_SVrefine2Falcon1plusDovetail_105:HG2_Ill_SVrefine2DISCOVARplusDovetail_65:HG4_PB_SVrefine2PBcRDovetail_67:HG4_PB_SVrefine2Falcon1Dovetail_92;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_87:HG4_Ill_SVrefine2DISCOVARDovetail_55;NumExactMatchSVs=2;ClusterMaxShiftDist=0.194305;ClusterMaxSizeDiff=0.194305;ClusterMaxEditDist=0.255924;PBcalls=16;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=618;DistBack=22803;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=159;REFWIDENED=1:5220233-5220391;PctSeqSimilarity=0.98;PctSizeSimilarity=0.9872;PctRecOverlap=0.8325;SizeDiff=-8;StartDistance=-101;EndDistance=-101;GTMatch=0;TruScore=93;MatchId=29.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:0:48:1:7:1/1:23:441:27:526:1/1:0:19:1/1:1:208:.:.:.
chr1	5447246	HG4_PB_pbsv_138	C	CTGGTGTGTTGTGAGTGTGTGGTGTGTGTATGTCGGTGTGTGTGTAGTGTGGTGGTAGCGTGTGAATCTGTGTGGGTGTGTTCATGTGTGGTTGTGAGTGCGCACTGTGTGTGTATGTAGGTGTTTGTGGTGTGGGTGTGTGTGTAGTGTGGTGTGTGGTCATTTGTGTTCATCTGGTGTGTGTATGTGGTGTGTGTGTGGTGTGGTGTTGGTGTGTGTGCGTATGTGTTGTGGTAGTTGTGTGGTTGTGTATTGGTGTGTGTGGTGTGTGTGTAGTATTTGGTGTGGCGTGTGTTGGTGTGTTCTTGTGTGTGTGGTGTGTCGTGTGGTATGTGGTGTTTGTGTGGTGTGTGTGTGGTTGTGTGTCGTCTGTGATGTGTATGTGGTGTGTGTGTGGTGTGCTGTGTGTATGTGATGTGTGTGTGATGTGTGGGGGTGGCTGTGGTGGTAGTGTGTAGTGTATGTGATGTGTGGTCCTGTGTGTGTGTATGTCGGTGTGTGTGTAGTGCGTGTGGGGAGGTGGGTGTGGCCGCTGTGTGGTAGTTGATGTGGTGATGGTGGTGTTGTGTATATGTGTGTGGGCGTGTGGTGTTGCCGAATGTGGTGTGTGTGCGATGTGCAGTGTGCGAGTATGTGTGTTGTAGTGTTTTGGTGTGTGGTTTGTGGTGTGTTGTGTCGTGTGCTGACGTGATGTGTGATAGTGTGTGGTGTGGGGGGGGGTGTTTGTCGGTAGTGTGTGGTGTGCTGTATGTGAGTGGCGAGTAAACCTGTGTGTGTGTGTGTGTGGTGTGTGTGTAGTGTGTCGGGTGTGTGTATGTGGTTTGTGTGGTGTGTTTTGTGTAGTGTGGGTGTGTATGTGGGTGTAGTGTGTGAGTAGTGTGTGGTGTTGTGTTGCTGCGTGTGTGTGGGTGTGTGTGTGTGGGTTGGTGTGTGGTGTGTGTGGCTGTTGTGGCGGATGTGATGTGTGTAGTAGTGTGCGTGACTGTGTGTTTGTGGCTGTGTGTGGTGTGTGGTGGTGTTGTCAGGTGTGTGTGTGGTGTGGTCGGGTGTGTGTAGTGTGTGGTGTGGTGTATGTGGGTGCGTGTGTGGTGCTGTGTGTTTGGAGTGTGTGTTGTGTGTATGTGGTTTGTGTGTGGTTTGGTCCCTGTGTGTGTGTAGTGTGTTGTATGTGTGTGTTTGGCATGTGTGGGTGTGTATGTGGTTGTGTGTGTGGTGTGTAGTTGTGGTGTGTGTAGTGGTGAGGTGTGGTGTGTTGTGTGGTGTGTGTAGTCGTTGTAGTGTTGTTGTGGTGTGTGGTGTGTTCGATGTGTAGTGATGTGGTGTGATGTGATATGTTGGATGTTGTGTGTGTGGTGGTGTGTGTGTATGTGATTGTGTGTGGTGTTGTTGTGGGGGTGTGGCTGTGTGTGTAGTGTATAGTGGGTGATGGTGCGTGTCGTGTGTGTGTTTGGGAGTGTGGTGTGTGTGGTTAGTGTGTGGATCCTGGTGTATGTGGTGCGTGGATGATGGTGTGTGTGTGGTGTGTGTGCTGTGGTGTGTGTGTGAGTGTGCTGCTGTTAGCCAGTGTGATGTGTTGTGTTGTGTACGTGTGTGGCCTGTGTGTATGTGGGTTTGCGTAATGGTGTGTGTGTAGTGTGTCCGTGTGTGTGTGGATGCCCGCAAACAGTATCTGACGTGGCGTGTGTGCTAGTGTGGTATGTGGTGTGCTGTAGGATGTGTGTTGTAGTGTGTGGTGTACATGTGTGTGGTGTGTGTGTGCTGCGTGTGTGTGGTGTGGTGTTTGGGGAGTGTGAGTGCATGTGGTGTAGATAGTCGATATGTGCGTGTGTGCTGCGTGTGTATGTGTGCGTGTTTGGGAGGTGCTGTGGTGTGTGTAGTGGTATGCTGCTGTGTGGATCTTTGTGGTGATGTGTATTGGTGTGTGTGTGGTGTATGGGGGTGTGGTGTGATGTAGTGTATGTGGTGTGTGGTGCGTGTGTGTGTGTGTGATGATACATCCGTGTGTGGGTGATTGTGTGGTGGGAATGTTGGGGGTGGTCGTGGGTGTTGTGTAGTGTTGTGGTGTGTGGTGCGTGGTGTGTGTGTGGTGTTTGGCGGCTGCGGGGGTGTGTGGTGTGTGTAGTCTGTATGTGGTACACCTGTGGGCTGACGGGTCCCGTGTGTGTGTGTATGTGATGTGTGTTGTGGCGTGTAGTGTGGGGTGTGCGTGTGTTAGTGTGGTGTGTGTACATGTTTGGAGGCGTGTGTGGTGTTGCGGCTAGGTGTGTTGTGGCTGCTGTGCGTGCGTGTACGTATGTGTGTGCGTGTGTGGGGGTGGAAAAAACCCTTGTGTGTAGTGTGTGGGTGTGTGTTGGTGAATGTGTGATGGTGTGTCTGTGGGGGTATGTGTGTTTGTAGTACGTGTTGTGTGTTTGGCTCATGTAGTGGTGTGTTGGGCGGGCGTTTGTGTGTAGTGTGTGTTTGTGTGTATGTGGTGCGTGTGTGTGGTGTGTGTGTGGGGGGGTGTGGTGTGTGTTGTAGTGTATGTGCGGTGTGGTGCGTGTCGTGCCTTGTGTGGTGTGGGGGGTGTGTCGGTCGTGTGTAGCGGTGTGAGTGTGGTGCATGTGTCTGTGTGTGTGTGCTGCGTGCGTGCTGTGTGTGTGTGTGTGTGGTCCCACCAGTTGTGTGGTGTGTGTTCTGACCTGCTTTTGCTTGTTTTGCAGAGGCAGCAAGCCCTGTAGCTCCATGGCGTGCTTTTGGACGTGGAGCTCCTGCAGCACCTGGTTCGAGACTGAGGGCCTCTGCCTTCGTTTAACAACATCGCCATGGAGCCCAAAAGGTAGCAGAAAAGGCGTGCAAACAGTGAGGATGCGTGGTCTTATAGGCTGGCAGAGACCACCTGTGATGGAGACCCTAATAGAGAACGCGAATATGCGGAACAGGGAATGACAGAAAGCAGGCAGAGGGCTTCCGTTAAACGTGGCATGGATGAGCACACATACTTATTCACAAGGGCTCCCTCCGCAAATGCCACCAGAATTACAACACAGGGATGTAAAAGAAGCGTTTCAAACACACAAGGACAAAGAAATCCAGTGCAGGATATTTCGGAGGCACTGAGCTGACAAAGCTTGGGAGAAAAAAGCAGATGAATAAAACTGGTGACAAGCTTAGCCCTAGCCAGGGAAACGGCGATCTAAGCCTGCAGGGGGAAGAAGGAACAGGAGGAGCGTGGACCCATTTGATCTCAAAGGCTGCCTAGAAAAGCTCTGCAGCATCCCAGGTACCAGTTGATGGCTCAGGTCAGGGCAGGGAAATAGAAAAGAAAAGCACTGAAAATTCGAGGGATGGTTTGCCGCAAGGAGCAGTCGCCCCAAACTGCCCCTGGCCACCTGTAATCAACGGGACCGTTCCTCATCTCCTCTCCAGCTAAAATGGAAGGGTCCTTGGTCTGGAGGAGGGTGCCATATCTGGAACAAGGATAAAACACGGAACTGAAAATAGTGCCCAAGTCTGCCATGCTGCGGCAGGGAAGGCCCACACACCCCCCTGTCTGTCCCTGGAGTGTTTTGAAGACCAAGCCCATAACCCCAGACATCAGACACTTTCCCAGGAAGCCAACAGCTCACCATGTTGGCCAGCCAGGTCAGGCCATGGGCGACCTCAGCTGAAGCAGCTCCCAGATCTTCCATGGGATGTGAGGGTCTTTGTTTTTTTTTTTTTTGAGATGGAGTTTGCTTCTTGTTGCCCAGGCTTGGTGTACAATGGTGCCAAATCTCAGCTCACCGCAACCTCTGCCTCTGGGCGTTCAAGCCAACTCCTCTGCCTCAGCCTCCCACAAGTTAGCTGGGCATTATAGGCATGCACACCAATACCTTGGTCTAATTTTGTATTTTTAATGGAGATGGCGCAGTTTCTTCATATCGTCAGGCTGGTCTTCAACTCCTGACCTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAAGTTGCTGGAATTACAGGTGTGCAAGGCCACCGCACCCAGCCATGAGGGTCTTCTTACGTAGTATTTTTAATGGTCGTTTTTGGCACCTCACTTCTTAAATATAACCACACAAATATTTTAGGAAAGCCTGGCTAACGTAAAAGTCAGAGCCAGAACAAGCAATAACACAGGGTGAAAGAAACTCAGAGAAGACAGGAATTCAGGCAACAAAGCAGGGAGAAACGCCCTCCATGTGTGTAAAATTAATGACAATACTGAGATATAAGGGAATATTACTGTATCCTTGCAAAGATAACACGATGTTCTTCTCTAAAGAGGGAGCACCTTCGAAAATCAGGAAAGCTTTTAGAAATGAAAAACCATTGCGAGTAGAATTAACATTGCACTAGAAGGACAGGCGGAAATAAAGGGGAAGAGTATTTCTTGGGATAGAAACAGAAATATAAAGAGGTAGGAAAATGGTCCAGAAAGAAAATTAGAGGCTTCAATCTGGGAGACCTAATGATCATATCCACAGGTGTCCAGAAAAAGAATGAAAAAAAAAAAATCGAGGGGAAGAAAACTTTTCCAGAAGGAAAGGAGTTGTTTCTAAGCTGAAAGAAACCCAATTGGAACCCAGAAAAAGGAGTGAAAAAAGACCCACGCACACAACCAGGGCACACAGTGGATTTAGATATGCAGCAGTGAGGGGATCTTAAGAGATAGACACTAAAAGCTCCCAGAGCCAAAGCAGCGGAGTTGGCATTCCAAAAACGGTGTTGCATCTCTTCCTAGGATTTCTGCAAGAATTACCTTGAAAGTTCAGAGGAAAATCATCTAGGCTAGGATCACAACCCAACTAAGCTATGAAATCATAAGCCCGAGCGCGTGCGTTGCAATTGTGAAGTATTTCAGATTTGAAGCCATCTCAAAACTATTCAGCGCCCAATAGGTCCTTCAAAGCCTGGGTGAAAATCATCAAAAGAAGGACAGTCTTCCCAGGGCGGTGAGGACGTTCCCGGGCATGCCGGTACTGTCTGTGCGCAGCCTCTAAGAGAACAAAGTTCCGTTTGTGGCAGGAGTGAGGAAGGAGAAGTCAGGGGGCATTATTCGGCCCAGAAGAGAAACGTGGGCCGCGAGACTAGCTGAAGGCTTTGCTCCATAAAGCCAGTGACATTGCAGCTCTGCGCGCTATAATCTCGGGCGGGGCAGTAGTGGAAGCGCCTGACAAAACCTTGCAAGGAAAGTCCTGTGGTTATTTCTTCCTAGGAAAGCGCAAAGTTGATCAGGAAAGGAAATGTAATCATAGAAAACTACATTTGCTGGCTCAGCTGCTGAATTTAATAAATTACCATTAATTATGTAAATGTGATATTGCATTCTAACCACCAAAATATGATACTGGAGGAGCGGGGCAGGGCCAGCTGCACGTGTGTGCTGTCTGGTGTGCTGTCTCTGTGTCTGTGTATCTCTGTTGTGTCCTGTGTGTGTCTCTGCTGTACTGTGTGTGTCTATGTGGGAATCTGTGTGTGTCTCTGTGTCTATGTCGTGGTCTGTGTGTTTTCTCTATGTCTGTGTATGCAGTTGTCTGTTGTGTGATCTATGGGTCTGGTGTCTGCTATCTGTGTTTTGTGTTCCCCCCTCTGGTTGTTGTGTCTATTGTCTGTGTGATTATGTCTCTGCTGTAAACTTGTCCCATGTGTCTGTGTGTGCCTGTGTGTGCTTCTTACTACGTGTGTGTTCTGTGTCTGTCTGTGTGTATGTCTCTGTGTCTTGTCTCTGTGTGTGTCTCTATGTGTGTCTGTGTTG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_94:HG4_PB_pbsv_138:HG2_PB_PB10Xdip_2376:HG3_PB_pbsv_133:HG2_PB_PB10Xdip_2375:HG4_PB_HySA_186:HG3_PB_HySA_181:HG2_PB_HySA_233:HG3_PB_SVrefine2Falcon1Dovetail_97:HG2_PB_SVrefine2Falcon1plusDovetail_108:HG2_PB_SVrefine2PB10Xhap12_117:HG2_PB_SVrefine2PBcRplusDovetail_93:HG2_PB_SVrefine2Falcon2Bionano_89:HG3_PB_SVrefine2PBcRDovetail_81;NumClusterSVs=14;ExactMatchIDs=HG4_PB_pbsv_138;NumExactMatchSVs=1;ClusterMaxShiftDist=0.163876;ClusterMaxSizeDiff=0.163688;ClusterMaxEditDist=0.234869;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=5749;DistBack=41;DistForward=17714;DistMin=41;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=79;REFWIDENED=1:5447168-5447246;PctSeqSimilarity=0.9291;PctSizeSimilarity=0.9009;PctRecOverlap=0.9009;SizeDiff=570;StartDistance=17;EndDistance=17;GTMatch=0;TruScore=91;MatchId=32.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:9:80:1/1:5:35:2:14:./.:36:61:26:31:./.:1:3:1/1:11:193:.:5057:.
chr1	5773583	HG2_PB_SVrefine2PBcRplusDovetail_95	C	CTTCTGCGGGGACCCGGAAATCGCCCGCGGGGGGCTTAGCGCTCCGTTACCGCTGAGGGTTGGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_119:HG2_PB_pbsv_139:HG2_PB_HySA_239:HG3_PB_HySA_182:HG3_PB_pbsv_136:HG2_PB_PB10Xdip_2430:HG2_PB_PB10Xdip_2429:HG2_PB_assemblyticsfalcon_174:HG3_Ill_SVrefine2DISCOVARDovetail_54:HG3_Ill_250bpfermikitraw_116:HG2_PB_SVrefine2PBcRplusDovetail_95;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_95:HG3_Ill_250bpfermikitraw_116:HG3_Ill_SVrefine2DISCOVARDovetail_54;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0793651;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.3125;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=63;DistBack=1364;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=189;REFWIDENED=1:5773584-5773772;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=33.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:32:1|0:5:27:12:3:./.:6:0:3:0:0/1:22:5:./.:.:.:.:.:.
chr1	5862843	HG2_PB_SVrefine2Falcon1plusDovetail_110	T	TCCATCATCATCACCATCATCAACACTGTCATCATCACCATCATCATCACTGTCATCATCACCATAATCATCACCATCACCATCATCACCATCATCATCATCACTGTCATCATCACCATCATCACCATCATCACCATCATCATCACCATCATCATCATCATTGTCATCATCAACATCATCATCACCATCACCATCATCGTCACCATCATCACCATCATCACCGTCATCATCACCATCATCATCATCATCAATGTCATTACCACCACCATCATCACCATCATCGTCATCATCATTACCATCATCACATCATCACTATCACTATCATCATCACCATCACCATCATCATCATCATGACTATTGCCGTCATCGCCACCATCATCATTAACACATCACCATCATCACCATTATCATCACCATCATCATATCATCACTATCACCATCATCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_85:HG3_PB_pbsv_138:HG4_PB_pbsv_143:HG4_PB_HySA_192:HG4_Ill_manta_14:HG4_Ill_MetaSV_20:HG4_Ill_GATKHCSBGrefine_81:HG3_Ill_MetaSV_25:HG3_Ill_GATKHCSBGrefine_56:HG2_Ill_GATKHCSBGrefine_63:HG2_Ill_MetaSV_21:HG2_PB_PB10Xdip_2432:HG2_PB_PB10Xdip_2431:HG2_Ill_breakscan11_2930:HG2_PB_pbsv_141:HG4_PB_SVrefine2PBcRDovetail_70:HG4_PB_SVrefine2Falcon1Dovetail_97:HG4_Ill_SVrefine2DISCOVARDovetail_60:HG3_PB_SVrefine2PBcRDovetail_83:HG3_PB_SVrefine2Falcon1Dovetail_99:HG3_Ill_SVrefine2DISCOVARDovetail_56:HG2_PB_SVrefine2PBcRplusDovetail_97:HG2_PB_SVrefine2PB10Xhap12_121:HG2_PB_SVrefine2Falcon2Bionano_92:HG2_PB_SVrefine2Falcon1plusDovetail_110:HG2_Ill_SVrefine2DISCOVARplusDovetail_72;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_85:HG4_PB_SVrefine2PBcRDovetail_70:HG4_PB_SVrefine2Falcon1Dovetail_97:HG4_Ill_SVrefine2DISCOVARDovetail_60:HG3_PB_SVrefine2PBcRDovetail_83:HG3_PB_SVrefine2Falcon1Dovetail_99:HG3_Ill_SVrefine2DISCOVARDovetail_56:HG2_PB_SVrefine2PBcRplusDovetail_97:HG2_PB_SVrefine2PB10Xhap12_121:HG2_PB_SVrefine2Falcon2Bionano_92:HG2_PB_SVrefine2Falcon1plusDovetail_110:HG2_Ill_SVrefine2DISCOVARplusDovetail_72;NumExactMatchSVs=12;ClusterMaxShiftDist=0.059081;ClusterMaxSizeDiff=0.0568928;ClusterMaxEditDist=0.145766;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=444;DistBack=5182;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=118;REFWIDENED=1:5862844-5862961;PctSeqSimilarity=0.9874;PctSizeSimilarity=1;PctRecOverlap=0.8404;SizeDiff=0;StartDistance=-71;EndDistance=-71;GTMatch=0;TruScore=94;MatchId=34.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:0:9:0:15:./.:0:0:0:0:1/1:0:15:1/1:2:67:.:.:.
chr1	5892308	HG2_PB_SVrefine2Falcon2Bionano_95	A	AGCTGTGGGCTGGGGGCTGGAGGCTGGAGGCTGGGGGCTGGGGGCTGGGAACTGAGGGCTGTGGGCTGGGGGCTGGGGGCTGGGGGGCTAGGGGGCTGGGGGCTGGGGATGGAGGCTGGGGGCTGGGAACTGAGGGCTGTGGGCTGGGGGCTATAGGCTGGGGGCTGGGGGCTGGGAACTAAGGGCTGTGGGCTGTGGGCTGGGGGCTATGGGCTGGGAGCTGGGGGCTGGGAACTGAGGGCTGTGGGCTGGGGGCTGGGGGCTGGGGGCTGGGGGGCTAGGGGGCTGGGGCTGGGGGATGGAGGCTGGGGGCTGGGAACTGAGGGCTGTGGGCTGTGGGCTGGGGGCTATAGGCTGGGGGCTGGGGGCTGGGAACTGAGGGCTGTGGGCTGTGGGCTGGGGGCTGGGGGCTGTGGGCTGGGGGCTGGGGGCTGGGGGGCTAGGGGCCTGGGGGCTGGGGGATGGAGGCTGGGGGCTGGGAACTGAGGGCTGTGGGCTGTGGGCTGGGGGCTATAGGCTCGGGGCTGGGGGCTGGGAACTGAGGGCTATGGGCTGGGAGCTGGGGGCTGGAAACTGGGGGCTGGGAGCTGGGGGCTGTGGGCTGGGGGCTGGAGGCTGGAGGCTGGGGGCTGGGAACTGAGGGCTGTGGGCTGGGGGCTGGGGGCTGGGGGCTAGGGGGCTGGGGGCTGGGGGATGGAGGCTGGGGGCTGGGAACTGAGGGCTGTGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_113:HG3_PB_pbsv_142:HG2_PB_PB10Xdip_2438:HG4_PB_pbsv_147:HG2_PB_PB10Xdip_2437:HG4_PB_HySA_193:HG2_PB_HySA_245:HG3_PB_HySA_188:HG2_PB_pbsv_144:HG4_PB_SVrefine2Falcon1Dovetail_100:HG3_PB_SVrefine2Falcon1Dovetail_103:HG2_PB_SVrefine2PBcRplusDovetail_99:HG2_PB_SVrefine2Falcon2Bionano_95:HG2_PB_SVrefine2PB10Xhap12_124;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_95;NumExactMatchSVs=1;ClusterMaxShiftDist=0.139373;ClusterMaxSizeDiff=0.132404;ClusterMaxEditDist=0.257278;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=726;DistBack=-68;DistForward=-1;DistMin=-68;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=105;REFWIDENED=1:5892309-5892413;PctSeqSimilarity=0.9892;PctSizeSimilarity=0.9864;PctRecOverlap=0.9199;SizeDiff=-10;StartDistance=-54;EndDistance=-54;GTMatch=0;TruScore=96;MatchId=35.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:28:./.:0:0:0:0:./.:0:0:0:0:./.:0:2:1/1:1:29:.:1150:.
chr1	7000972	HG2_PB_PB10Xdip_2581	A	GGGGGTCCTCACAGGGAGGGGGTCCTCAGAGGGAGGGGATCCTCCGGGGAGGGGATCCTCACGGGGAGGGCATCCTCAGGGGAGGGGGATCCTCAGGGGAGGGGGATCCTCACGGGGAGGGGGATCCTCAGGGGGAGGGGATCCTCAGGGGAGGGGATCCTCAGGGGAGGGGGATCCTCAGGGGGAGGGGGATCCTCACGGGGAAGGGGGATCCTCACGGGAGGGGGTCCTCACGGGGAGGGGGATCCTCAGGGGAGGGGATCCTCACGGGGAGGGGGATCCTCACGGGAGGGGGTCCTCACGGGGAGGGGGATCCTCAGGGGAGGGGATCCTCACGGGGAGGGGGATCCTCAGGGAGGGGGTCCTCAGGGGAGGGGGATCCTCATGGGAGAGGGATCCTCACGGGGAGGGGATCCTCACGGGGAGGGGGATCCTCAGAGGGAGGGGGGATCCTTGGGGGAGGGGGATCCTT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_92:HG2_PB_HySA_274:HG3_PB_pbsv_158:HG2_PB_SVrefine2PBcRplusDovetail_107:HG2_PB_PB10Xdip_2581:HG2_PB_PB10Xdip_2580:HG2_PB_SVrefine2PB10Xhap12_137:HG2_PB_SVrefine2Falcon1plusDovetail_125:HG4_PB_SVrefine2Falcon1Dovetail_112;NumClusterSVs=9;ExactMatchIDs=HG2_PB_PB10Xdip_2581;NumExactMatchSVs=1;ClusterMaxShiftDist=0.218868;ClusterMaxSizeDiff=0.218868;ClusterMaxEditDist=0.234343;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=471;DistBack=-1;DistForward=17;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:7000973-7000971;PctSeqSimilarity=0.9267;PctSizeSimilarity=0.9253;PctRecOverlap=0.9253;SizeDiff=-38;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=92;MatchId=36.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:0:26:1:30:./.:1:14:0:8:0/1:3:10:1/1:1:25:.:820:.
chr1	7078188	HG4_Ill_GATKHCSBGrefine_88	T	TAATGCCAGGGCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGCCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_79:HG4_PB_pbsv_162:HG2_PB_pbsv_159:HG2_PB_HySA_279:HG4_Ill_MetaSV_23:HG4_Ill_GATKHCSBGrefine_88:HG2_Ill_MetaSV_26:HG2_Ill_GATKHCSBGrefine_71:HG2_PB_PB10Xdip_2585:HG2_Ill_breakscan11_2933:HG2_PB_PB10Xdip_2586:HG2_PB_SVrefine2PB10Xhap12_141:HG2_PB_SVrefine2Falcon1plusDovetail_128:HG2_PB_SVrefine2PBcRplusDovetail_110:HG4_Ill_SVrefine2DISCOVARDovetail_68:HG2_Ill_SVrefine2DISCOVARplusDovetail_79:HG2_PB_SVrefine2PB10Xhap12_140;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_71:HG2_Ill_MetaSV_26:HG4_Ill_GATKHCSBGrefine_88:HG4_Ill_MetaSV_23;NumExactMatchSVs=4;ClusterMaxShiftDist=0.162921;ClusterMaxSizeDiff=0.157303;ClusterMaxEditDist=0.224658;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=182;DistBack=-16;DistForward=33534;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=88;REFWIDENED=1:7078117-7078204;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9945;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=38.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:15:0|1:15:0:1:12:0|1:7:0:0:10:0/1:21:5:./.:.:.:.:.:.
chr1	7580260	HG3_PB_SVrefine2PBcRDovetail_96	A	ACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCCTCCTCCCTCCTCCTCCTCCCCTCCTCCCTCCTCCTCCTCCTCCCCTCCTCCCTCCTCCTCCTCCCTCCTCCTCCTCCCCCTCCCTCCTCCTCCCCTCCTCCCTCCCACTTCCTCCCCTCCTCCCCTCCCCTCCCCCTCCCTCCTCCTTCTCCTCCCCCTCCTCCTCTCCTCCTCCCTCCCTTCCTCCCCTCCTCCTCCTCCCCCTCCTCCTCTTCCTCCTCCCCTCCTCCTCTCCCCCCTCCTCTTCCTCCTCCTCCTCCCCCTCCTCTCTCCCCTCCCCTCCCCTCCCCCTCCTCCCTCCTCCTCCCTCCTCCTCTCCTCCCCCTCCTCCTCTTCCCCTCCTCCTCTCCCCTCCTCCCCCTCCCCTCCTCCTCCTCCCTCTCCCTCCCCCTCCTCCTCTCCCTCCCCTCCCCTCCCCTCCTCCCCTCCTCCTCTCCTCCCCTCCTCCTCTCCCCTCCCCCTCCTCCCTCCCCTCCTCCTCTTCCTCCTCCCCCTCCTCTTCCTCCCCCTCCCCCTCCTCTCCTCCCCCTCCTCTCCTCCTCCCCCTCCTCCTCCTCCCTCCCCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCTCCTCCTCTTCCCTCCTCCTCCTCCCCTCCTCTCCTCCCTTCCCTCCTCTTCCTCCTCCCCCTCCTCCCCTCCTCCTTCCCCCCTCCTCCTCCCCCCTCCCTCCTCCCCCCTCCTCCTCCCCCCCCTCCTCCTCCCCTCCCCCTCCTCCTCCCCCTCCCCCTCCTCCTCCTCTCCCCTCCTCCTCCCTCCTCCTCCCTCCTCTCCCCTCCTCTCCCCTCCTCCTCCTCCTCCTCCCCTCCTCCCCCTCCTCCCTCCCCTCCTCCCTCTTCTTCCTCCCCTCCTCCCTCCTCTTCCTCCCCTCCTCCTCCTCCCCTCCTCCTTCTCCTTCTCCTCCTCTTCCCCTCCTGCCTCCTCCCCCTCCTCCTCCCCCTCCCCTCCTCCTCCACCTCCCCCTCCTCCCCCCTCCCCCTCTCCCCCTCCTCTCCCCTCCTCCCCTCCTCCCTCCTCCCGCCTCCTCCTCTCTCCTCCTCCTCCCTCCTCCTCTCCCCTCCTCCCCTCCTCCCTCCTCCCCCCCTCCTCTTCTCCTCCCCCTCCTCTTCCTCCCCTCCCCTCCTCTCCCTCCCCTCCTCCTCTTCCTTCTCCCCTCCTCCTCTTCCCTCTCCTCCTCTTTCCCTCCTCCCTCCTCCTCCTCCTCCCCCTCCTTCTCCCCCTCCTCCTCTTCCCCCTCCTCCTCTTTCCCCTCCTCCCTCCTCCGCCCTCCTCCTCCCCCTCCCTCTCCTCCTCCGCCTCCCCTTCCTCCTCCCTCTCCCCCTCCTCCTCTCCCTCCCCCTCCTCACCTCCTCCCTCCTCCCCTCCTCCTCCCCTCCCCCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_112:HG2_PB_PB10Xdip_2590:HG2_PB_PB10Xdip_2589:HG2_PB_HySA_286:HG4_PB_pbsv_164:HG4_PB_SVrefine2Falcon1Dovetail_115:HG3_PB_pbsv_165:HG3_PB_SVrefine2Falcon1Dovetail_121:HG3_PB_assemblyticsfalcon_189:HG2_PB_assemblyticsfalcon_201:HG3_PB_SVrefine2PBcRDovetail_96:HG2_PB_SVrefine2Falcon1plusDovetail_131:HG2_PB_SVrefine2PB10Xhap12_144;NumClusterSVs=13;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_96;NumExactMatchSVs=1;ClusterMaxShiftDist=0.210206;ClusterMaxSizeDiff=0.210206;ClusterMaxEditDist=0.248549;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1454;DistBack=5033;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=63;REFWIDENED=1:7580261-7580323;PctSeqSimilarity=0.956;PctSizeSimilarity=0.9674;PctRecOverlap=0.9681;SizeDiff=-49;StartDistance=-19;EndDistance=-19;GTMatch=1;TruScore=96;MatchId=39.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:41:1/1:0:24:0:18:./.:0:0:0:1:./.:1:4:0/1:15:73:.:1415:.
chr1	7863493	HG2_PB_HySA_287	C	CAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_115:HG2_PB_pbsv_165:HG2_PB_HySA_287:HG3_PB_pbsv_168:HG2_PB_SVrefine2PB10Xhap12_147;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_287;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0899471;ClusterMaxSizeDiff=0.0846561;ClusterMaxEditDist=0.155844;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=186;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=162;REFWIDENED=1:7863494-7863655;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9946;PctRecOverlap=0.9893;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=40.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:22:34:0|1:20:0:4:31:./.:1:1:14:0:./.:30:2:./.:.:.:.:.:.
chr1	8013207	HG4_PB_SVrefine2PBcRDovetail_82	A	GCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCCG	10	PASS	ClusterIDs=HG4_PB_pbsv_171:HG4_PB_SVrefine2PBcRDovetail_82:HG3_PB_assemblyticsfalcon_196:HG2_PB_assemblyticsfalcon_208:HG3_PB_SVrefine2Falcon1Dovetail_125:HG4_PB_SVrefine2Falcon1Dovetail_119:HG2_PB_SVrefine2Falcon1plusDovetail_135:HG2_PB_pbsv_169;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_82;NumExactMatchSVs=1;ClusterMaxShiftDist=0.116402;ClusterMaxSizeDiff=0.116402;ClusterMaxEditDist=0.354839;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=99;DistBack=90;DistForward=29;DistMin=29;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=401;REFWIDENED=1:8012965-8013365;PctSeqSimilarity=0.9813;PctSizeSimilarity=0.9697;PctRecOverlap=0.3636;SizeDiff=3;StartDistance=62;EndDistance=62;GTMatch=0;TruScore=77;MatchId=41.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:28:./.:14:10:9:13:./.:5:0:1:0:0/1:18:3:./.:.:.:.:.:.
chr1	8087064	HG4_Ill_GATKHC_176	C	CAGTGTGGGACGGTGAGGGACAGTGTGGGACGGTGAGGGACAGTGAGGGACAGTGTGGGACGGTGAGGGACAGTGAGGGACTGTGTAGGACAGTGAGGGACAGTGTGGGACAGTGAGGGACTGTGTAGGACAGTGAGGGACAGTGTGGGACGGTGAGGGACTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_126:HG4_PB_HySA_223:HG2_PB_pbsv_170:HG4_PB_SVrefine2Falcon1Dovetail_120:HG2_10X_SVrefine210Xhap12_104:HG3_PB_SVrefine2PBcRDovetail_101:HG3_PB_HySA_221:HG4_PB_SVrefine2PBcRDovetail_83:HG4_Ill_SVrefine2DISCOVARDovetail_73:HG4_Ill_GATKHC_176:HG3_Ill_GATKHC_186:HG4_PB_pbsv_172:HG4_Ill_GATKHCSBGrefine_94;NumClusterSVs=13;ExactMatchIDs=HG3_Ill_GATKHC_186:HG4_Ill_GATKHC_176:HG4_Ill_SVrefine2DISCOVARDovetail_73:HG4_PB_SVrefine2PBcRDovetail_83;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0720721;ClusterMaxSizeDiff=0.0660661;ClusterMaxEditDist=0.3003;PBcalls=8;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=162;DistBack=-1;DistForward=55;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=211;REFWIDENED=1:8086858-8087068;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=42.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:0|1:33:0:1:27:0|1:14:0:1:41:0/1:13:4:./.:.:.:.:.:.
chr1	8336892	HG2_PB_SVrefine2Falcon1plusDovetail_136	T	TCAAAGAAATACACATACACACACCACCACACACAAACACACACATACACCACACACACACATACACCACACACATACACACACCACACACATACACACACCACACACACACACAAACACACATCACACACATACAAACACACACATACACCACACACATACACACACCACACACATACACACACCACACACATACACACCACACACATACACCACACACAAACACACACATACACCACACACACACATACACACACCACACACATACACATACCACACACACACATACACCACACACACACCACACACACCACACACATACACACACCACACACATACACACACCACACACACATACACACGCCACACACACCACACACACCACACAGACAACACATACAAAGATACACATACACCACACATATACACATACATACCACACACACATACACCACACACACAAACCACACACACCGCACACACATACACACACCACACACACATATACACGCCACACACATACACACACCAAGCACACACACACCACACACACATACACAAACACACACATACACACACCCCACACACACAAACCACACACACCACACACACATACACCACACACATACACACACCACACACATACACACACGAAAGACATACATACACCACACACACATACACAAACACACACATACACATGTACACACATACACACCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_149:HG4_PB_HySA_226:HG4_PB_HySA_225:HG2_PB_PB10Xdip_2722:HG2_PB_PB10Xdip_2721:HG4_PB_pbsv_173:HG3_PB_pbsv_175:HG3_PB_SVrefine2PBcRDovetail_102:HG4_PB_SVrefine2Falcon1Dovetail_121:HG3_PB_SVrefine2Falcon1Dovetail_127:HG2_PB_pbsv_171:HG4_PB_SVrefine2PBcRDovetail_84:HG2_PB_SVrefine2Falcon1plusDovetail_136:HG2_PB_SVrefine2PBcRplusDovetail_117;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_136;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0748809;ClusterMaxSizeDiff=0.0748809;ClusterMaxEditDist=0.197125;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=719;DistBack=15445;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=397;REFWIDENED=1:8336893-8337289;PctSeqSimilarity=0.9883;PctSizeSimilarity=0.9809;PctRecOverlap=0.9332;SizeDiff=-14;StartDistance=-42;EndDistance=-42;GTMatch=1;TruScore=96;MatchId=43.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:33:0:10:./.:16:135:18:183:./.:2:18:1/1:3:247:.:.:.
chr1	8446627	HG3_Ill_GATKHCSBGrefine_70	A	AGAACTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_140:HG2_PB_SVrefine2PB10Xhap12_154:HG2_PB_PB10Xdip_2738:HG3_PB_assemblyticsfalcon_206:HG3_PB_pbsv_180:HG4_PB_HySA_231:HG2_PB_pbsv_176:HG4_PB_pbsv_177:HG2_PB_assemblyticsfalcon_215:HG2_Ill_breakscan11_2934:HG2_PB_HySA_299:HG4_PB_SVrefine2Falcon1Dovetail_125:HG4_PB_SVrefine2PBcRDovetail_88:HG3_PB_SVrefine2Falcon1Dovetail_131:HG4_Ill_GATKHCSBGrefine_95:HG3_Ill_GATKHCSBGrefine_70:HG2_Ill_GATKHCSBGrefine_76:HG4_Ill_MetaSV_25;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_76:HG3_Ill_GATKHCSBGrefine_70:HG4_Ill_GATKHCSBGrefine_95;NumExactMatchSVs=3;ClusterMaxShiftDist=0.251256;ClusterMaxSizeDiff=0.251256;ClusterMaxEditDist=0.294416;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=1:8446628-8446635;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=44.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:41:0|1:32:0:2:39:0|1:30:0:0:9:0/1:36:8:0/1:10:46:.:.:.
chr1	8501990	HG4_PB_HySA_233	T	TCAATACCACACACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCGCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCGCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2935:HG2_PB_pbsv_177:HG4_PB_pbsv_178:HG2_PB_SVrefine2PBcRplusDovetail_121:HG2_PB_assemblyticsPBcR_189:HG2_PB_assemblyticsfalcon_217:HG3_PB_assemblyticsfalcon_207:HG4_PB_HySA_233:HG3_PB_pbsv_181:HG2_PB_SVrefine2Falcon1plusDovetail_141:HG3_PB_SVrefine2Falcon1Dovetail_132:HG4_PB_SVrefine2Falcon1Dovetail_126:HG3_Ill_GATKHCSBGrefine_71:HG2_PB_HySA_302;NumClusterSVs=14;ExactMatchIDs=HG4_PB_HySA_233;NumExactMatchSVs=1;ClusterMaxShiftDist=0.235119;ClusterMaxSizeDiff=0.235119;ClusterMaxEditDist=0.315476;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=347;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=1:8501991-8502007;PctSeqSimilarity=0.9899;PctSizeSimilarity=0.9942;PctRecOverlap=0.9942;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=45.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:1|0:1:36:27:0:0|1:28:0:1:9:0/1:34:7:0/1:13:23:.:.:.
chr1	9137802	HG3_PB_pbsv_190	G	GCGAGAGGGAGGAGGGAGAGAGGGAGGGAAGGGAGGGAGGGAGAGACCAGGGGAGGGAGGGAGAGAGGGAGGAGGAGGGAAGGGAGAGGAGGGAGGGAGGGAGAGAGGGAGGGAAGGAGAGAGGGAGGGAGGGAGGGAGGGAGAGAGGGAGGGGAGGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_137:HG2_PB_assemblyticsPBcR_196:HG2_PB_SVrefine2PBcRplusDovetail_127:HG2_PB_SVrefine2PB10Xhap12_164:HG2_PB_SVrefine2Falcon1plusDovetail_146:HG3_PB_pbsv_190:HG2_PB_pbsv_184:HG3_PB_SVrefine2PBcRDovetail_110;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_190;NumExactMatchSVs=1;ClusterMaxShiftDist=0.217544;ClusterMaxSizeDiff=0.217544;ClusterMaxEditDist=0.238596;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=157;DistBack=4;DistForward=23;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:9137803-9137802;PctSeqSimilarity=0.9474;PctSizeSimilarity=0.9682;PctRecOverlap=0.949;SizeDiff=5;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=95;MatchId=46.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:17:0|1:15:0:2:23:./.:0:3:12:0:0/0:27:1:./.:.:.:.:.:.
chr1	9176239	HG2_Ill_GATKHC_181	T	TTATATATATAATATAATTATATATATTTATATTATATATTATATATAATATAATTATATATAATTATATTATATATATTATATTATATATAATTATATATAATTATATATATATTATATGTAATATAAATATATATAATTATATTATATATATTATATGTAATATAATTATATATATTTATATTATATATTATATATAATATAATTATATATATAATTATAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_138:HG4_PB_pbsv_187:HG3_Ill_manta_18:HG2_Ill_manta_21:HG4_Ill_GATKHC_187:HG4_Ill_GATKHCSBGrefine_98:HG2_Ill_GATKHC_181:HG2_Ill_manta_20:HG4_PB_HySA_240:HG2_PB_pbsv_185:HG3_PB_pbsv_191:HG2_PB_SVrefine2Falcon1plusDovetail_147:HG4_PB_SVrefine2Falcon1Dovetail_131:HG3_PB_HySA_240:HG4_Ill_SVrefine2DISCOVARDovetail_82:HG3_Ill_SVrefine2DISCOVARDovetail_77:HG2_Ill_SVrefine2DISCOVARplusDovetail_95:HG2_PB_SVrefine2PB10Xhap12_165:HG3_PB_SVrefine2PBcRDovetail_111:HG2_PB_SVrefine2PBcRplusDovetail_128:HG4_PB_SVrefine2PBcRDovetail_91;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHC_181:HG4_Ill_GATKHCSBGrefine_98:HG4_Ill_GATKHC_187;NumExactMatchSVs=3;ClusterMaxShiftDist=0.174497;ClusterMaxSizeDiff=0.174497;ClusterMaxEditDist=0.244111;PBcalls=12;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=222;DistBack=25;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=124;REFWIDENED=1:9176192-9176315;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=47.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:1:17:0:41:./.:0:3:0:2:1/1:0:24:./.:.:.:.:.:.
chr1	9189324	HG2_PB_PB10Xdip_2807	G	TACCCCGGCCTTTAAGCCCCGCCTACATTCCCCGCCCCGCCCCGCCGTCCCGGGCCCTGAGCCCCGCCCACGCGCCGCACCCCGCCCCTC	20	PASS	ClusterIDs=HG4_Ill_250bpfermikitraw_137:HG2_PB_HySA_317:HG4_PB_HySA_241:HG2_PB_pbsv_186:HG2_PB_PB10Xdip_2808:HG3_PB_pbsv_192:HG2_PB_PB10Xdip_2807;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_2807:HG2_PB_PB10Xdip_2808;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0543478;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.26087;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=89;DistBack=5470;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=129;REFWIDENED=1:9189267-9189395;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.9889;PctRecOverlap=0.978;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=48.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:37:1/1:1:20:1:11:./.:2:4:2:5:./.:2:4:./.:.:.:.:.:.
chr1	9230294	HG3_PB_SVrefine2PBcRDovetail_112	T	TAAAAACTGTAACTGGGGCCGAGCGCTGTGGCTCATGACTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACAAGGTCAAGAGATCGAGACCATTCTGGCTAACATGGTGAAACCCCATCTCCACTAAAAATACAAAAAATTAGCCAGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACTTAGGAGGCTATGGCAGGAGAATGGCATGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACCCCAGCCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAGAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_132:HG4_PB_pbsv_190:HG2_PB_PB10Xdip_2810:HG2_PB_pbsv_187:HG2_PB_PB10Xdip_2809:HG3_Ill_GATKHCSBGrefine_82:HG2_Ill_MetaSV_28:HG2_Ill_GATKHCSBGrefine_80:HG2_PB_HySA_321:HG3_PB_pbsv_193:HG3_Ill_MetaSV_34:HG3_Ill_GATKHCSBGrefine_81:HG4_Ill_MetaSV_26:HG4_Ill_GATKHCSBGrefine_101:HG2_Ill_GATKHCSBGrefine_79:HG4_PB_HySA_243:HG3_PB_HySA_244:HG2_PB_HySA_320:HG4_PB_SVrefine2PBcRDovetail_92:HG4_Ill_SVrefine2DISCOVARDovetail_84:HG3_PB_SVrefine2PBcRDovetail_112:HG3_Ill_SVrefine2DISCOVARDovetail_79:HG2_PB_SVrefine2PBcRplusDovetail_129:HG2_PB_SVrefine2PB10Xhap12_166:HG2_Ill_SVrefine2DISCOVARplusDovetail_97:HG2_10X_SVrefine210Xhap12_115:HG3_PB_SVrefine2Falcon1Dovetail_139:HG2_PB_SVrefine2Falcon1plusDovetail_148;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_115:HG2_Ill_SVrefine2DISCOVARplusDovetail_97:HG2_PB_SVrefine2PB10Xhap12_166:HG2_PB_SVrefine2PBcRplusDovetail_129:HG3_Ill_SVrefine2DISCOVARDovetail_79:HG3_PB_SVrefine2PBcRDovetail_112:HG4_Ill_SVrefine2DISCOVARDovetail_84;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0609756;ClusterMaxSizeDiff=0.0609756;ClusterMaxEditDist=0.222556;PBcalls=16;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=319;DistBack=14513;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=303;REFWIDENED=1:9230295-9230597;PctSeqSimilarity=0.9696;PctSizeSimilarity=0.9969;PctRecOverlap=0.558;SizeDiff=1;StartDistance=-141;EndDistance=-141;GTMatch=0;TruScore=84;MatchId=49.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:44:1/1:0:14:0:23:./.:0:2:0:4:1/1:0:16:./.:2:25:.:.:.
chr1	9342497	HG2_PB_SVrefine2PB10Xhap12_167	G	GCCCCTGCTCCCTCCTTTTCCTCCTCCTCCTCTCCCTCTTTTTCCTCCTCTTCCTCCCCCTCCTCCTTGTCTCCTCCTCCCCCTCCTCCTTGTCTCCTCCTCCCTCTCCCCCTTCCCCCTCCCCCCTCCCCCTTCCCCTCCCCCTCCTTGTCCTCCTCCTCCTCCCCCTCCTCTTCCCCCTCCTCCCCCTCCTCTTCCCCCTCCTCCCCCTCCTCTTCCCCCTCCTCCCCGTCCTCTTCCCCCTCCTCCCCCTCCTCCCCCTCCTCTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_167:HG2_PB_assemblyticsfalcon_230:HG4_PB_pbsv_191:HG2_PB_SVrefine2Falcon1plusDovetail_149:HG2_PB_pbsv_188:HG2_PB_HySA_322:HG3_PB_HySA_245:HG2_PB_PB10Xdip_2812:HG2_PB_PB10Xdip_2811:HG4_PB_SVrefine2Falcon1Dovetail_133:HG3_PB_SVrefine2PBcRDovetail_113:HG4_PB_SVrefine2PBcRDovetail_93:HG3_PB_SVrefine2Falcon1Dovetail_140:HG2_PB_SVrefine2PBcRplusDovetail_130;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_167:HG2_PB_SVrefine2PBcRplusDovetail_130;NumExactMatchSVs=2;ClusterMaxShiftDist=0.200409;ClusterMaxSizeDiff=0.200409;ClusterMaxEditDist=0.274262;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=268;DistBack=24160;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=90;REFWIDENED=1:9342498-9342587;PctSeqSimilarity=0.9766;PctSizeSimilarity=0.9813;PctRecOverlap=0.7063;SizeDiff=5;StartDistance=-76;EndDistance=-76;GTMatch=0;TruScore=88;MatchId=50.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:0:18:2:22:1/1:0:6:0:8:./.:0:5:./.:.:.:.:.:.
chr1	9683994	HG2_PB_SVrefine2PBcRplusDovetail_134	C	CGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCCAGGGCGGGTGGATCACCTGAGGTCAGGAATTCGAGACCAGCCAGGCCAACATGGCGAAACCCCATCTATACTAAAAACACAAAACTTTAGCCGGGCTTGGTGGTGGCGTGCGCCTGTAATCCCTGCTACTTGGGAGGCTGAGACACAAGAATCGCTTGAACCCGAGATGGGGTGGTTGCAGTGAGCCAAGATCGCGCCACTGCACTACAGCCTGGGCAACAGAGCAAGACTCTGTCTCAAAGATAAATACATACATACATACCTCTGACCTGTGCCTTGGGGTGGGGTCTTACTCCCTATACAAATGGCCTGGGTGGGAGACAGCAGCGAGTCCTGATACAAGAATCCCTCTGGGTTCTTAGAATTTTTTTTCTTTCTTTCTGAGACGAAATCTAGTTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAACCTCTGCCTCCCAGATTCCGGTGATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGGATTATGGGCACCCGCCACCACACCCGGCTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCATGTTAGCCAGGTTGGTCTCGAACTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACCACGCCTGGCTGGGTTCATAGAATTTTGAGTTGTAAAATAAAATTTGGAGACCCTCTAAATTTACTAGGGCAGAAGGGAACTAAGCCCTGGAGACTGATTCACATAGCATGTTTGTAACTCCTGCCTTTCTTAGATTGCAGATTGACTTTCTTCCCCATTGTTCTTGTTCTGTAAATGACTAGGAGAGATCAGAGACCAGACCTCCTTCCCCTCCAATCACTGATCTTTGTTATAAATTAACTGCCTCCTCTATTGTCCTGTGCCTAACTCAGACCAGATGGCCCAAAGGACCCCAAGACTGTTACATCTTCAGTGTTAAGGTTAAAATATACCTTTCCTGAAAGAAAAAGACCACCTCAGCTAATCAGATTGCATTAAGCCTTATAGAGAAATATGTTGAAATTCTGTTAAGCGGCCCTGAACTTTATCTATGTAAACAATCCTGAATTTCTACACTTCAGATCGAAACTGCCTTTGCACAGATTATGACAGTGAGAGGAATCTAACATGGCTGACTCCATCTTGCTTCTAGCTTCCCAGGCTGGCTGTCCTCACTCAGTCCTGGGCGTGGGCCAAGCTAGCCTTGGGAGGAATTCAGTTTATAGTTTAACTTTGAAGCAAGGATGATAATAGTCCCTCCCTACAACTGAGCCGTCCTTGTTTGGGGGCTGAAACCGCCTTTGTGAGACTAATGAAAGGTCACAAGATTAGGATTATGGGAGGAGGCTGAATTTTGTTAAAACATAGGCATTGTTGGCCAGACGTAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGATGGATCACGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATAGTGAAACCCCGTCTCTACTAAAAGTACAAAAAATTAGCCAGGTGTGGTGGCAGGCACCTGTAATCCCAGCTAGTCAGGAGGCTGAGGCAGGATAATTGCCTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGCATAGTTTCTATAATTCCTTACTGCTCAGGAGTCATATGGTCAGAGGTCACAAGATGTGTGGCTTCCCCAATTGCTCCTATAGATAACATCACTATTGTAGAAACTAGGATTGGTCTTTTGAGATGTTTTTCAGACTGACCCCCTCCAGACTCATGACTAATGACTCAACCAGTCCTGTAGCCCCAGCCAGAGATAGATGGACCATTTCCTACACCCTGTGATTTTTATCCCCAACCAATCAGCAGCATCCATCCCCGAGCCCCTGCCACCAAACTGTCCTTGAAAAACCCCTAACCTCCGAGCTTTGGGGAGACCGAGTTCAATAATAACTCCACCTTCCATGTGGCTGGCCTCAAATTATTAATAATTAAACTTTTTTTTTTCTTTTTTGAGACAGAGTCTCACTGTCGCCCAGGTTGGAGTGCAGTGGCACGATCCTGGCTCACTGCAAGCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCATCCAGAGTAGCTGGGACTACAGGTACATGCCACCATGCCCAGCTAATTTTGTATATTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGCTGAACTCGAACTCCTGACCTCAGGTGATCCACCCGCCTCCGTCTTCCAAAGTCTGGGATTACAGGCGGGAGCCACCGCGCCCGGCCCTAAACTCTCTCTTTGCTGCAATACCATAGTTAATAAATTTGTATGCCTTTTTTCCTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTGATACAGGGTCTCACTTATGTTGCCCGCGCTGGAGTGCAGTGGTTTTTCACAGGCATGACCACAGCACACTACAGCCTTAAACTCCTGGGCTCAAGTGACCCTGCTGCCTCGTCCTACGAAGTAGCCCTTTTCTCCTCTTAATCTGCCTTTTATCAGTTGATTTTCATCAAAACTTCAGAGGTGGAAGGAGAAGTTTGCCCTGGGCCCATGTAGTTTTGGCACAGTGAGCAGGATTCCAAAACCACTCTGCTCTTCTAGAAGCTGTAGTCAAGGGAACCCAAGGCCTGAGAAGCCAGCAGAAGGGTAAGAAATTCTTACCAGCCAGGTTACTGGCCTCTCTCTCTGTAGAGTCTGGTTGAGCAGATGGTAAAAATTACTGTTTATCTCTTTTTCCTCTCCAAAATCTTGATTAATGAGAGAAAAAGATTTGTATGATTAGTCTTGGGTATAGCAACCCTGATGTACTTTTTTTTTTCTTTTAAACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAATGGTGTGATCTCGGATCACTGCAACCTCCCCCTCCCAGGTTCGAGCCATTCCCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCATGCTTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCGCCATGTTGGCCAGGCTGGTCTAGAACTCCTGACCTCAGGTAATCCATCCATCTCGGCGTCCCAAAGTGCTGGGATTACAGGTATGAGCCACCACGCCTGGCTTGGTGTGCTTTTTGCTATGAATATTCATATTGTCTGATCCTTTTCCCCCCAGGAATAGTATTTTCCTCTGTCTTTGTCTTTCTGTCTTGTTCTGTCATAGACAAGGGCACCACAGGGTGGAACACAGACTTAAAACTCCTAGAAGTCCACTGTTCAAGCTGGCCCTGCATACTGGTCAGTTTTGCTGTTCTGACCAGGTCAGCTTCTATTTAGACAAATCTTTTTTTTTTTTCTTTTTTTTGAGACAGAGTTTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCTCGATCTCAGCTCACTGCAAGCTCCGCCTCCTGGGTGCACGCCATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGCGCCCGCCAACACGCCGGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTTGCTGGGATTACAGGCGTGAGCCACTGTGCCCGGCCTATTTAGACGAATCTTGCTCAGGGTCCCCACAATAAAAACTGGATGAGATACTGTGTTAGGCAGTTCTTTTTTTTTTTTTTTTTTTGAGACTGAGTTTTGCTCTTGTCCCCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTTTGCCTTCTGGTTTCAAGCGATTCTCCTGCCTCTGCCTCCCGAGTAGCTGGGATTACAGGCACCCACCACCACCCCCAGCTAAGTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGATTCACCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCTGGCCTGCACAGTTCTTGCATTGCTGTAAAGAAATACCCGAGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAGGGTGAAACCCCGTCTCTATGAAAAATACAAAAAATTAGCTGGGCGTGGTGGCGGAAGCCTGTAGTCCCAGCTATTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGGGACAAGAGCAAAACTCAGTCTCAAAAAAAAAAAGCATAACAAAGAAATACCTGAGACTGGGTAATTTATAAAGAAAAGAGGATTAATTGGCTCACGGTTCTGCAGGCTGTACAGGAAGCATGGTGCTGACATCCGCCTGGCTTCTGGGAGGCCTTAGGGAGCCTTTACTCATGCGGAAGGCAAGGTGGGAGCAGGCACAGCACATGACAAGAGCAGACACGGGTGGGAGAAGGTGCCGCATGAGATGTCACTCACTATCGCAAGGACAGCACCAAGGAGATGGCGCTAAACCATTTATGAGAAATCCACCCCATGATCCAGTCACCTCCCATCAGGCGCCACCTCCAGCATTGGCAATTACAATCCAGCAGGAGACTGGGGGGACAAATAGCCAAACTATATCAGGCTCCCTCTTGTCTTGTTTTATGTCCTCGAGAGCTTGACTTGTGACAAGGGGGAGCACTCTCTCTTAGTCTTCACCATCTGGGGGGCATGATTTTGGGATCACATCCAGTGTCCAATCTGAAAAGATTGGGAACCCCAAGACACATGAGATTTTAGGCAGGTTACCCTTTGTTCCGAATGTGTCAAGCTCTCAGGGGAGTTTGAGGAAGTCCCATCTATAAGGGGACTTTGTCATCTCAACTCATGCTGCTTGGTTAGTCCCGGGAAAATCCAACCCCAGGAGGACCTACCCAGTATCACAGAGTAATGCGCCTGTGACTGGCAGACACCCCAAAATGTGCAGGGTACTAGAAGTACCTTATATACAAACACCATCCTTAACTGTCTGTGGCAACAAGAGTCTTTTGCCACTCAGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAATCCAAGGCAGGTAGATCACGTGAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGGTGAAACCCCATCTCTACTAAAACTACAAAAAAATTAGCCGGGTGTGGTGGCGCATGCCTGTAATCCCAGCTACTGGGGAGGCTGAGGCAAGAGAAACACTTGAACCTGGGAGGCGGAGGTTGCCGTGAGCCAAGATCACGCCATCGCACTCCAGCCTGGGCGACATGAGCAAAAATCCATCTCAAAAAAAAAGAGTCTTTTGCCATCTTAGCCTATTCCTGGGAGTGATCATTGAGACTGCCTCTTCTATGCCTGTTCCGGAAAACACCTCTTGATTGTATGATAAAAACTTATTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCATCTGAGGTCAGGAGTTCGCGACCAGTCTGACCAACGTGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCTGGGCGTGGTGGCGCGTGCCTGTAATCCCAGCTACTCTGGAGGCTGAAGCAGAAGAATCACTTGAACCCGGGAAGCAGAGGTTGCAATGAGCTGAGACCGTGCCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAAAAACAAACAAAAAAACAAAAAAAACACAACTTATTGTTAACCTGGAAAATTACCTCCTGGGCTTTCCATGAAGAGGTGGATTGGACTGAGTCACTATTAGAATAAATACATCATTGAAATTTTAATTCTCCATGGCTAAAAGATGAATATTTTAAATTAGAAAGACTTCTATATTTGAAAAATATTTTAGACCTCTCTCATTCCAAACAATTGCTTATTTGAATTTATAGTGGTTGAAACTTTTTTTTTTTTTGAGACAGGATGGAGTGCAGTGGCACGATCACTGCTCACTGCAGCCTTGAACTGCTGGGCTCAGGCGAGCCTCCTACCTCAGCCTCCTGTGTAGCTGGGACTGCAGGGGCAGGCCACCACCCTCAACTTTTTAATTTTTTTAGAGGGGTCTCAACTATGTTGCCCAGGCTGATCTTGAACTTGTGGGCTCAAGCAGTCCTCCTGCCTTGGCCTCTCAAAGTGCCGGGATTACAGGTGTAAGCCACCATGCCCAGCCCAAACTTTTTAGAAAACACACATAATAACTGGGAGAGGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_152:HG4_PB_HySA_251:HG2_PB_HySA_332:HG2_PB_PB10Xdip_2817:HG2_PB_PB10Xdip_2818:HG4_PB_HySA_250:HG2_PB_HySA_331:HG2_PB_assemblyticsfalcon_234:HG3_PB_assemblyticsfalcon_225:HG2_PB_assemblyticsPBcR_208:HG3_PB_SVrefine2PBcRDovetail_115:HG4_PB_SVrefine2Falcon1Dovetail_136:HG3_PB_SVrefine2Falcon1Dovetail_142:HG4_Ill_SVrefine2DISCOVARDovetail_88:HG2_PB_SVrefine2PBcRplusDovetail_134:HG2_PB_SVrefine2PB10Xhap12_170:HG4_PB_SVrefine2PBcRDovetail_95;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_170:HG2_PB_SVrefine2PBcRplusDovetail_134:HG4_Ill_SVrefine2DISCOVARDovetail_88;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0990348;ClusterMaxSizeDiff=0.0990348;ClusterMaxEditDist=0.107196;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=6481;DistBack=7219;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=263;REFWIDENED=1:9683995-9684257;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9998;PctRecOverlap=0.9918;SizeDiff=-1;StartDistance=-52;EndDistance=-52;GTMatch=0;TruScore=99;MatchId=51.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:0:17:0:12:1/1:0:6:0:9:1/1:0:14:1/1:1:896:.:6506:.
chr1	10028609	HG3_PB_SVrefine2PBcRDovetail_117	A	AAGGTCAGGAGTTTGAGACCAGCCTGGCCAACGTGGTGAAACCCCGACTCTACTAAAAAAAAAAGAACAAAAATTAGGCCTGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_1:HG4_PB_pbsv_195:HG2_PB_pbsv_192:HG2_PB_assemblyticsfalcon_236:HG3_PB_pbsv_197:HG2_PB_assemblyticsPBcR_210:HG3_PB_assemblyticsfalcon_227:HG4_PB_SVrefine2PBcRDovetail_97:HG4_PB_SVrefine2Falcon1Dovetail_138:HG4_Ill_SVrefine2DISCOVARDovetail_91:HG4_Ill_MetaSV_27:HG4_Ill_GATKHCSBGrefine_103:HG3_PB_SVrefine2PBcRDovetail_117:HG3_Ill_manta_19:HG3_Ill_SVrefine2DISCOVARDovetail_81:HG3_Ill_MetaSV_35:HG3_Ill_GATKHC_211:HG3_Ill_GATKHCSBGrefine_83:HG2_PB_SVrefine2PBcRplusDovetail_136:HG2_PB_SVrefine2PB10Xhap12_172:HG2_PB_SVrefine2Falcon1plusDovetail_154:HG2_Ill_manta_22:HG2_Ill_SVrefine2DISCOVARplusDovetail_104:HG2_Ill_MetaSV_29:HG2_Ill_GATKHC_190:HG2_Ill_GATKHCSBGrefine_82:HG2_10X_SVrefine210Xhap12_120:HG3_PB_SVrefine2Falcon1Dovetail_144:HG4_PB_HySA_253:HG2_PB_HySA_334;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_120:HG2_Ill_GATKHCSBGrefine_82:HG2_Ill_GATKHC_190:HG2_Ill_MetaSV_29:HG2_Ill_SVrefine2DISCOVARplusDovetail_104:HG2_Ill_manta_22:HG2_PB_PB10Xdip_1:HG4_PB_SVrefine2PBcRDovetail_97:HG4_PB_SVrefine2Falcon1Dovetail_138:HG4_Ill_SVrefine2DISCOVARDovetail_91:HG4_Ill_MetaSV_27:HG4_Ill_GATKHCSBGrefine_103:HG3_PB_SVrefine2PBcRDovetail_117:HG3_Ill_manta_19:HG3_Ill_SVrefine2DISCOVARDovetail_81:HG3_Ill_MetaSV_35:HG3_Ill_GATKHC_211:HG3_Ill_GATKHCSBGrefine_83:HG2_PB_SVrefine2PBcRplusDovetail_136:HG2_PB_SVrefine2PB10Xhap12_172:HG2_PB_SVrefine2Falcon1plusDovetail_154;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0692042;ClusterMaxSizeDiff=0.0622837;ClusterMaxEditDist=0.204082;PBcalls=16;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=140;DistBack=15564;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=181;REFWIDENED=1:10028554-10028734;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=52.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:./.:2:43:0:1:./.:1:22:0:4:1/1:0:8:./.:.:.:.:.:.
chr1	10845192	HG3_Ill_250bpfermikitraw_155	T	TCTTTCCTTCCTTCCTTCCTTCCTCCCTTCCTTCCTCCCTCCCTTCCTCCCTC	20	PASS	ClusterIDs=HG3_PB_pbsv_200:HG3_Ill_svaba_176:HG3_Ill_scalpel_111:HG3_Ill_Krunchall_134:HG3_Ill_GATKHC_216:HG3_Ill_GATKHCSBGrefine_87:HG3_Ill_FB_81:HG3_Ill_250bpfermikitraw_155:HG3_Ill_150bpfermikitraw_128:HG2_Ill_svaba_171:HG2_Ill_scalpel_108:HG2_Ill_SpiralSDKrefine_107:HG2_Ill_Krunchall_132:HG2_Ill_GATKHC_193:HG2_Ill_GATKHCSBGrefine_86:HG2_Ill_250bpfermikitraw_151:HG2_PB_HySA_335;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_151:HG2_Ill_GATKHCSBGrefine_86:HG2_Ill_GATKHC_193:HG2_Ill_Krunchall_132:HG2_Ill_SpiralSDKrefine_107:HG2_Ill_scalpel_108:HG2_Ill_svaba_171:HG3_Ill_150bpfermikitraw_128:HG3_Ill_250bpfermikitraw_155:HG3_Ill_FB_81:HG3_Ill_GATKHCSBGrefine_87:HG3_Ill_GATKHC_216:HG3_Ill_Krunchall_134:HG3_Ill_scalpel_111:HG3_Ill_svaba_176;NumExactMatchSVs=15;ClusterMaxShiftDist=0.123894;ClusterMaxSizeDiff=0.123894;ClusterMaxEditDist=0.210526;PBcalls=2;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=-1;DistForward=32787;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:10845191-10845194;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=53.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:0|1:30:5:4:19:0|1:16:1:0:8:0/1:21:18:./.:.:.:.:.:.
chr1	11031132	HG2_PB_PB10Xdip_81	A	GAGGCAGAGGCTGCAGTGAGTCCAGCCTGGGGGACAGAGTGAGACCCTGTCTCAAAAAGAAAAAAAAAACAGCATAGGCACTGGTGTCAGTAGGCATCTGGGTTTGAATCCCACCTCTGTTGTGTGTATGTGTGTGTGTGTGTGTGTGTACCTGTTGCTTAGTTTCAGTTTATTTCTGTGAGTTGATTGTATGATAATGATGGTGATGATAGTAATAATAGTGATGGTAGTAGAGGGATGATATTGATGGTGATGGTGGTGATGATGATGTGAATGGTGGTGATGATAGTGATGGTGGTGATGGTGGTGATGATGATGGTGATGGTGACAATCATGGTAGTGATGGTCACAGTGATGATGGTGCTGGTGATGGTGGTGATGATGGTGTTAATGGTGGTGATGATAGAAATGATGGTGGTGATGATGGTGTTAATGGTGGTGATGATAGTAATGATGGTGGTGATGGTGGTGATCATGATGGTGATGGTGACAATCGTGGTAGTGATGGTCACAGTGATGATGGTGCTACTGATGGTGATGATGATGGTGTTAATGGTGGTGATGATAGTGATGGTGGTGATCATGATGGTGATGGTGATAATCGTGGTAGTGATGGTCACAGTGCTGATGGTGCTGGTGATGGTGGTGATGGTGTTATTTGTGGTAGTGATGATGGTGATAATAGTGATATGATGATGGTGATTATGGTGTCGGTGGTGGTAATGATGGTGGTAGTGATGATGGTGGTATTGGTGCTAGTGACAGTGATGATGGCAATAATAGTGATGGTGACTATGGTGGTGATGGTGGTGGTGGTAATGGTGGTGATGATAGTAATGATGGTGGTGATGGTGGTGATCATGATGGTGATGGTGATAATCGTGGTAGTGATGGTCACAGTGATGATGGTGGTGATGATGGTGTTAATGGTGGTGATGATAGTAATGATGGTGGTGATGGTGGTGATCATGATGGTGATGGTGATAATTGTAGTGATGGTCACAGTGATGATGGTGCTGGTGATGGTGTTATTCATGGTAGTGATTATGGCAATAATAGTGATATGATGATGGTGATTATGGTGTCGATGGTGGTGGTAATGATGGTGGTAGTGATGATGGTGGTACTGGTGCTAGTGACAGTGATGATGGCAATAATAGTGATGGTGACTATGGTGGTGATGGTGGTGGTGATGTGGTGGTGGTAATGGTGGTGATGGTGGTGACGATGGCAGTGATGGGACTTCATAAGATGTGAGACTTTAATGAGTTAACACATATAAAAGTCTTTACAGGGTGATCACTGCAGAGCACTTGCCTAAAGGTGACAGCTCTTATGATAATAATAATTACTGTCATCCAGAGATGAAAGGACTTATCCAGGAACAGAGCAGCAGGACCAGCGGCCCAAACTCCCCACCATCATTTTCCAGCCCATCACAGAGCCAGACGGAGTATTAGAGAAATCGAGTAAATGTTAGAATACACATGACACTGAATCAATAACGAACCCAATGTTGTGTTCCTCTGCAGGTATGAGACATATGTCTGACTCCTACAGGCCTCAGGGCTTCATTGTGGACACAGCCTCCCACTGTCTAGGAGAGCTGGTAGAGAAACTGGGAGGTCTCCCCTGAATCTGCTTGACATGGATTATGGGATACTCACGTGTACTTTAAAAAATACAGGCTGGGGCCGAGCACGGTGGCTCACGCCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCGAAACCCCATCTCTACTAAACATACAAAAATTAGCAGGGCATGGTGGTGTGTACCTGTAATCCCAGCTACCCAGGAGGCTGAGGCAGGAGAATCACTGGAACCCGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_156:HG2_PB_pbsv_196:HG4_PB_pbsv_200:HG3_PB_pbsv_202:HG2_PB_PB10Xdip_82:HG2_PB_PB10Xdip_81:HG4_PB_HySA_255:HG2_Ill_breakscan11_2938:HG2_PB_assemblyticsPBcR_213:HG2_PB_assemblyticsfalcon_239:HG4_PB_SVrefine2Falcon1Dovetail_140:HG3_PB_SVrefine2Falcon1Dovetail_147:HG3_Ill_SVrefine2DISCOVARDovetail_87:HG4_PB_SVrefine2PBcRDovetail_99:HG2_Ill_SVrefine2DISCOVARplusDovetail_107:HG2_PB_SVrefine2PBcRplusDovetail_139:HG2_PB_SVrefine2PB10Xhap12_176:HG4_Ill_SVrefine2DISCOVARDovetail_96;NumClusterSVs=18;ExactMatchIDs=HG2_PB_PB10Xdip_81:HG2_PB_PB10Xdip_82;NumExactMatchSVs=2;ClusterMaxShiftDist=0.161963;ClusterMaxSizeDiff=0.161963;ClusterMaxEditDist=0.196921;PBcalls=14;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1898;DistBack=-18;DistForward=19;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=96;REFWIDENED=1:11031057-11031152;PctSeqSimilarity=0.9963;PctSizeSimilarity=0.9958;PctRecOverlap=0.9958;SizeDiff=8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=54.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:22:0:19:1/1:1:15:1:7:1/1:2:24:1/1:9:375:.:1868:.
chr1	11433701	HG2_PB_SVrefine2PB10Xhap12_178	G	GGTGTGTGGATGGGTGTGTGTGTGGATGGATGTGTGTGTGTATGTGTGTGTGGTGTGTGTATGAGTCTGGTGTGCATGTGGATGGATGTGTGTGAATGTGTGTGTGGTGTGTGTGTGAATGAGTGTGGTGTGTGTAGAGTGAGTGGTGTGTGTAGAGTGAGTGGTGTGTGTGTAGTGTGTGCGTGTGGATGGGTGTGGTGTGTATGTATGGATGGGTGTGTGTGGTGTGTGTGGATGGGTGTATGTGGTGTGTGTGGTCTGCATGTGGTGTGTGTGTATGAGTGTGATGTGTGTGGTGTGTGGTCTGTGTGTATGAATGTGGTGTGTGTGTGTGGATAGGTGTGGTATGTATGAATGGGTGTGTGTGGTGTGTGTGAATGGGTGTAGTGTGTATGGATGGGTGTGTGTGGTGTGTATGGTGTGTGTGTGGATAGGTGTGTGTGGTGTGTGTGGATGTGTGTTTGGTGTGTGTGGTGTGTGTACGATGTGTGTGGTGTGTGTGTGGTGTGTGTGGCATGTGTGTGTTGTGTGTGCAGATGAGCGTGTGGGCTGTGTGCATGTGTGAATGAGCGTGCGGGCTGTGTGTGGATGGGTACGTATGGTGTGTGTGTATGTGTGTTTGGTGTGTTTGTGTGGTGTGTGTAATGTGTGTATGGTTTGTGTGGTGTGTGTGTGGCGTGTGTGTGGTGTGTGTGTATGGACGTGTGTGGATGGGTATGTATGGTGTGTGTGTTGTGTTGTGTGGTGTGTGTGGTGTGTGTGTGTATGAGCGTGTGTGGTGTGTGTGTGTGAATGAGCGTGTGGGCTGTGTGTGGATGGGTATGTATGGTGTATGCGGTGTGTGTTGTGTGTGCAGATGAGCGTGTGGGCTGTGTGTGTGGTGTGTGCATGTGTGAATGAGCATGTGGGCTGTGTGTGGATGGGTACGTATGGTGTGTGTGGTGTGTGTGTGTATGTGTGTTTGGTGTGTTTGTGTGGTGTGTGTATGGTGTGTGTGGTGTGTGTGGCATGTGTGTGTTGTGTGTGCAGATGAGCGTATGGGCTGTGTGTGTGGTGTGTGTGTGTGAATGAACGTGTGGGCTGTGTGTGGATGGGTACGTATGGTGTGTGTGGTGTGTGTGTGGCGTGTGTGGATGGGTATGTATAGTGTGTGTGGTGTGTGTGCTGTGTTGTGTGGTATGTGTGTGTGTGGATGAGCGTGTGTGGTGTGGGTGTGTGTATGAGCGTGTGGGCTGCGTGTGGGAGTGTGGATGAGCAAGTAGGCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_149:HG3_PB_HySA_254:HG3_PB_pbsv_207:HG2_PB_pbsv_198:HG4_PB_pbsv_204:HG2_PB_HySA_342:HG3_PB_pbsv_206:HG2_PB_PB10Xdip_99:HG2_PB_PB10Xdip_98:HG2_Ill_breakscan11_2940:HG4_PB_HySA_260:HG2_PB_HySA_341:HG4_PB_SVrefine2Falcon1Dovetail_143:HG4_PB_SVrefine2PBcRDovetail_102:HG3_PB_SVrefine2PBcRDovetail_120:HG2_PB_SVrefine2PBcRplusDovetail_141:HG2_PB_SVrefine2PB10Xhap12_178:HG2_PB_SVrefine2Falcon1plusDovetail_159;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_159:HG2_PB_SVrefine2PB10Xhap12_178:HG2_PB_SVrefine2PBcRplusDovetail_141:HG3_PB_SVrefine2PBcRDovetail_120:HG4_PB_SVrefine2PBcRDovetail_102;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0897138;ClusterMaxSizeDiff=0.0850735;ClusterMaxEditDist=0.237708;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1264;DistBack=35459;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=513;REFWIDENED=1:11433702-11434214;PctSeqSimilarity=0.9816;PctSizeSimilarity=0.9873;PctRecOverlap=0.8063;SizeDiff=16;StartDistance=-237;EndDistance=-237;GTMatch=0;TruScore=92;MatchId=55.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:./.:0:0:0:0:./.:65:35:60:41:./.:0:0:1/1:4:182:.:1339:.
chr1	12625704	HG3_Ill_GATKHCSBGrefine_94	C	CTCCTGGCCTGCAGGCCAAATGCAATTTCATGGAAACCTCAGGAGTCAAATCCTCTCCAAAAGGCTGGGCTGGGGCCACACCATGAAGACACAAGTCTGTCTGCAGCTCAAGGATGGTCAGAAAAATCGGGACTAAGACAAGACCCCCACTTCATCCTCCTCGTTTATCCCTGCCCACTGAGACGTGCTCATCCCCAGTCTGTTTCCTGGGAGAGCCAGTGAGAGGCATCTGCCCTGTGGGCTCACTTGTGTCTAGACACACTAAGGGTCGGGCGATAGATGGGTGTGGACATTCCAGGAGGACGTCTTTAGCAACGCCCCATACTTTGGTAACATGTCCTCAAGGACCAAAAAGGAGACGGGTCCTTGAGGACCCATCTTGGGGCCTCGTCGTTTGCTGTCACCTGGTACTGTAGTCAGCAAGGGGACTTGGGGGTCAGGCAGAGCTGGTTCTAGATCCCTTGAGCCCAGGAGTTCCAGGCTGCAGTGAGCTATGATTGTGCCACTGCACTCCAGCCTGGACAACAGAGAAACACCCTGTCCCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAATACCTGTCTCCAGTGCTCACAAGCCTATTAACCTGGGCAAGGGTTTCCCCTGATGAGTGTCTTGTCACTTATGAAATGGGCTTCATAATACCACTTTTCAAAAGGTTAGTGTGGGCCGGGTGCAGTGGCTCACACCTGTAATCCCAGCTT	20	PASS	ClusterIDs=HG2_PB_pbsv_201:HG3_PB_pbsv_213:HG2_PB_assemblyticsPBcR_229:HG4_PB_pbsv_209:HG2_Ill_breakscan11_2941:HG2_PB_PB10Xdip_151:HG2_PB_PB10Xdip_150:HG4_PB_HySA_279:HG4_PB_SVrefine2Falcon1Dovetail_148:HG3_PB_SVrefine2Falcon1Dovetail_153:HG2_PB_SVrefine2Falcon1plusDovetail_162:HG3_PB_SVrefine2PBcRDovetail_125:HG2_10X_SVrefine210Xhap12_133:HG4_Ill_MetaSV_31:HG4_Ill_GATKHCSBGrefine_114:HG3_Ill_SVrefine2DISCOVARDovetail_94:HG3_Ill_MetaSV_39:HG3_Ill_GATKHCSBGrefine_94:HG2_Ill_SVrefine2DISCOVARplusDovetail_114:HG2_PB_SVrefine2PBcRplusDovetail_145:HG2_PB_SVrefine2PB10Xhap12_182:HG2_Ill_MetaSV_33;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_114:HG3_Ill_GATKHCSBGrefine_94:HG3_Ill_MetaSV_39:HG3_Ill_SVrefine2DISCOVARDovetail_94:HG4_Ill_GATKHCSBGrefine_114:HG4_Ill_MetaSV_31;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0381471;ClusterMaxSizeDiff=0.0367847;ClusterMaxEditDist=0.203528;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=724;DistBack=14122;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=1:12625705-12625708;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=57.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:./.:0:0:0:2:./.:0:3:0:10:1/1:0:21:1/1:5:97:.:.:.
chr1	13796534	HG2_10X_SVrefine210Xhap12_137	G	GTTTTGAGAAGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTAGCGTGATCTCGGCTCAAAGTTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTGCTGAGTAGCTGGGACTACAGGCACCCGCCACCATGCCCGGCTAATTTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCTGCCTTGGCCTCCCAAAGTGCCGGGATTACAGGCGTGAGCCACCACGCCCGGCCAATTAACTGTTTAAAAAAAAAATGTTCTCGCCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTTGCTAACACAGTGAAACCTGTCTCTACTAAAAATACAAAAAAATTAGCCGAGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGCAGAATGGCGTGAACCTGGGAGGCGGAGCTTTCAGTGAGCTGAGATCGCGCCACTGCACTCCTGCCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAGTTATATCCAGTTACCTTGACAAAAGTACCTTCTTTTTTTTTTTTTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_166:HG3_PB_assemblyticsfalcon_252:HG3_PB_SVrefine2Falcon1Dovetail_156:HG3_PB_HySA_270:HG3_PB_pbsv_217:HG2_PB_HySA_360:HG4_PB_pbsv_215:HG2_PB_pbsv_207:HG3_Ill_MetaSV_41:HG2_Ill_MetaSV_36:HG4_Ill_MetaSV_35:HG4_Ill_GATKHCSBGrefine_122:HG2_PB_PB10Xdip_365:HG4_PB_HySA_285:HG2_PB_HySA_359:HG3_PB_SVrefine2PBcRDovetail_127:HG4_PB_SVrefine2Falcon1Dovetail_152:HG2_PB_SVrefine2Falcon2Bionano_100:HG2_Ill_SVrefine2DISCOVARplusDovetail_117:HG2_10X_SVrefine210Xhap12_137:HG2_PB_SVrefine2PBcRplusDovetail_148:HG2_PB_SVrefine2PB10Xhap12_190:HG4_PB_SVrefine2PBcRDovetail_111:HG3_Ill_SVrefine2DISCOVARDovetail_97;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_137:HG2_Ill_SVrefine2DISCOVARplusDovetail_117;NumExactMatchSVs=2;ClusterMaxShiftDist=0.060876;ClusterMaxSizeDiff=0.0579065;ClusterMaxEditDist=0.19369;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=657;DistBack=4256;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=128;REFWIDENED=1:13796535-13796662;PctSeqSimilarity=0.985;PctSizeSimilarity=0.9924;PctRecOverlap=0.8326;SizeDiff=-5;StartDistance=-108;EndDistance=-108;GTMatch=0;TruScore=93;MatchId=58.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:1:18:0:7:./.:0:1:0:1:1/1:0:17:./.:6:85:.:682:.
chr1	15362774	HG2_Ill_GATKHC_249	A	ACCCAGCTCCCCCCGCCCTGCCCGCCCAGCTCCCCCTGCCCTGCCCGCCCAGCTCCCCCTGCCCTGCCCG	20	PASS	ClusterIDs=HG2_PB_pbsv_219:HG4_PB_HySA_310:HG2_PB_HySA_382:HG4_Ill_GATKHC_267:HG4_PB_pbsv_226:HG2_Ill_GATKHC_249;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHC_249:HG4_Ill_GATKHC_267;NumExactMatchSVs=2;ClusterMaxShiftDist=0.070922;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.312057;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=194;REFWIDENED=1:15362737-15362930;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=59.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:35:0|1:29:8:2:25:./.:2:8:16:1:0/1:11:5:./.:.:.:.:.:.
chr1	15551697	HG2_PB_HySA_389	G	GGAGGGGAGGGGAGGGAGGGGAGGGTGGAGGGGATGGGAGGGAGGGGGAGGGGAGGGAGGGGGAGGGGAGGGAGAGGGAAGGGAGGGGAGGGGGGGGAGGAAAGCAGAGGGGATGGGAGGAGGAGGGGGAGGGGACAGGAGGGAAGTGAGGGGGAGGGGATGTGAGGGGGGAGGGAGAGGGGAGGGGAAGGGGAGGGTGAGGGAGGGGGAGGGGAGGGAGGGAGTGGGGGGAGGGAGTGGGGGAGGGGAGAGGGGGAGGGGAGGGAGTGGGGGA	10	PASS	ClusterIDs=HG4_PB_pbsv_229:HG2_PB_PB10Xdip_623:HG2_PB_pbsv_221:HG2_PB_PB10Xdip_624:HG3_PB_HySA_291:HG2_PB_SVrefine2PB10Xhap12_202:HG2_PB_SVrefine2PBcRplusDovetail_158:HG2_PB_SVrefine2Falcon2Bionano_109:HG4_PB_SVrefine2PBcRDovetail_122:HG3_PB_assemblyticsfalcon_278:HG4_PB_assemblyticsfalcon_265:HG3_PB_SVrefine2Falcon1Dovetail_167:HG4_PB_SVrefine2Falcon1Dovetail_160:HG2_PB_HySA_389:HG2_PB_SVrefine2Falcon1plusDovetail_174;NumClusterSVs=15;ExactMatchIDs=HG2_PB_HySA_389;NumExactMatchSVs=1;ClusterMaxShiftDist=0.252427;ClusterMaxSizeDiff=0.248544;ClusterMaxEditDist=0.302913;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=273;DistBack=8;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=1:15551698-15551718;PctSeqSimilarity=0.965;PctSizeSimilarity=0.9597;PctRecOverlap=0.9194;SizeDiff=11;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=94;MatchId=60.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:1:13:0:23:./.:0:13:1:4:0/1:1:7:./.:.:.:.:.:.
chr1	15641098	HG2_PB_SVrefine2PB10Xhap12_203	T	TGTGGGTATGTGGGTGTGGGTGTGAGGATGTATGTGGGTGTGTGGGAGGGTGTGTGAGGGTGTGGATGTGTGTGGGTATGTGGGGGGTGTGGGAGTGTGGAGATGTATGAGTGTGGGTGTGTGAGAGGGTGTGTGTGGGGGTGTATGGGTGTGTAAGCATAGGGGGTGTATGGGTGTGAGTATGGGGGGAGTATGTATGGGTGTGTGGGGTGTGTGTGGATGTGTGGGTGAGGGTGTTGGGAAGGGTGTGTGGGGTGTGGATATGTGTAGGTGTGTGTGGGTGTGTGTGGATATGGGTAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_161:HG4_PB_HySA_317:HG2_PB_HySA_392:HG2_PB_pbsv_222:HG2_PB_HySA_391:HG3_PB_HySA_292:HG2_PB_HySA_390:HG2_PB_PB10Xdip_626:HG2_PB_PB10Xdip_625:HG3_PB_pbsv_234:HG4_PB_SVrefine2PBcRDovetail_123:HG4_PB_pbsv_230:HG3_PB_SVrefine2PBcRDovetail_137:HG2_PB_SVrefine2PBcRplusDovetail_159:HG2_PB_SVrefine2PB10Xhap12_203:HG2_PB_SVrefine2Falcon2Bionano_110:HG2_PB_SVrefine2Falcon1plusDovetail_175:HG3_PB_SVrefine2Falcon1Dovetail_168;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_110:HG2_PB_SVrefine2PB10Xhap12_203:HG2_PB_SVrefine2PBcRplusDovetail_159:HG3_PB_SVrefine2PBcRDovetail_137:HG4_PB_SVrefine2PBcRDovetail_123;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0744337;ClusterMaxSizeDiff=0.0680713;ClusterMaxEditDist=0.265781;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=299;DistBack=-45;DistForward=-1;DistMin=-45;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=45;REFWIDENED=1:15641099-15641143;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9967;PctRecOverlap=0.8896;SizeDiff=1;StartDistance=-33;EndDistance=-33;GTMatch=0;TruScore=95;MatchId=61.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:36:1/1:0:15:2:13:1/1:6:195:1:141:1/1:0:14:1/1:1:75:.:.:.
chr1	16637582	HG2_Ill_GATKHCSBGrefine_110	G	GAGGCCAAGGTGGGCGAATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGTCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGA	20	PASS	ClusterIDs=HG2_PB_HySA_399:HG4_PB_SVrefine2PBcRDovetail_125:HG2_PB_pbsv_226:HG4_PB_pbsv_237:HG2_PB_SVrefine2PBcRplusDovetail_161:HG3_Ill_SVrefine2DISCOVARDovetail_110:HG2_Ill_SVrefine2DISCOVARplusDovetail_128:HG3_PB_SVrefine2Falcon1Dovetail_170:HG4_PB_SVrefine2Falcon1Dovetail_163:HG4_PB_HySA_324:HG3_PB_pbsv_239:HG4_Ill_manta_34:HG4_Ill_SVrefine2DISCOVARDovetail_118:HG4_Ill_MetaSV_39:HG4_Ill_GATKHCSBGrefine_137:HG3_Ill_GATKHCSBGrefine_114:HG2_Ill_GATKHCSBGrefine_110:HG3_PB_assemblyticsfalcon_286:HG4_PB_assemblyticsfalcon_273:HG2_PB_SVrefine2Falcon1plusDovetail_177:HG2_PB_PB10Xdip_665;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_110:HG3_Ill_GATKHCSBGrefine_114:HG4_Ill_GATKHCSBGrefine_137:HG4_Ill_MetaSV_39:HG4_Ill_SVrefine2DISCOVARDovetail_118:HG4_Ill_manta_34:HG4_PB_SVrefine2PBcRDovetail_125;NumExactMatchSVs=7;ClusterMaxShiftDist=0.242857;ClusterMaxSizeDiff=0.242857;ClusterMaxEditDist=0.257143;PBcalls=13;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=148;DistBack=-1;DistForward=14942;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:16637583-16637582;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=62.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:7:20:0|1:10:3:1:13:./.:10:0:1:4:0/1:28:8:./.:.:.:.:.:.
chr1	16677245	HG2_PB_pbsv_227	A	AGAGAAAGAAAAGAAAAGAAGATAAGAAAGAAAGAAAGAGAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAAGAAGAAGAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_227:HG2_Ill_SVrefine2DISCOVARplusDovetail_129:HG4_PB_SVrefine2PBcRDovetail_126:HG4_PB_pbsv_238;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_227;NumExactMatchSVs=1;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.184211;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=122;DistBack=7;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:16677246-16677245;PctSeqSimilarity=0.93;PctSizeSimilarity=0.9313;PctRecOverlap=0.9389;SizeDiff=-9;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=93;MatchId=63.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:17:0|1:27:0:4:14:./.:25:0:3:4:0/1:8:19:./.:.:.:.:.:.
chr1	16750681	HG3_PB_SVrefine2PBcRDovetail_140	A	ACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGGTTGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCATGGTGGCGGGTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_157:HG4_PB_assemblyticsfalcon_274:HG2_PB_HySA_401:HG4_PB_pbsv_239:HG2_PB_PB10Xdip_667:HG2_PB_PB10Xdip_666:HG4_Ill_manta_35:HG4_Ill_MetaSV_40:HG4_Ill_GATKHCSBGrefine_138:HG3_Ill_Spiral_142:HG3_Ill_MetaSV_48:HG3_Ill_GATKHCSBGrefine_115:HG2_Ill_MetaSV_41:HG2_Ill_GATKHCSBGrefine_111:HG4_PB_SVrefine2Falcon1Dovetail_164:HG3_PB_HySA_296:HG4_PB_HySA_328:HG3_PB_pbsv_240:HG3_PB_SVrefine2Falcon1Dovetail_171:HG2_PB_pbsv_228:HG4_PB_SVrefine2PBcRDovetail_127:HG4_Ill_SVrefine2DISCOVARDovetail_119:HG3_PB_SVrefine2PBcRDovetail_140:HG3_Ill_SVrefine2DISCOVARDovetail_112:HG2_PB_SVrefine2PBcRplusDovetail_162:HG2_PB_SVrefine2PB10Xhap12_207:HG2_PB_SVrefine2Falcon1plusDovetail_178:HG2_Ill_SVrefine2DISCOVARplusDovetail_130;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_157:HG4_PB_SVrefine2PBcRDovetail_127:HG4_Ill_SVrefine2DISCOVARDovetail_119:HG3_PB_SVrefine2PBcRDovetail_140:HG3_Ill_SVrefine2DISCOVARDovetail_112:HG2_PB_SVrefine2PBcRplusDovetail_162:HG2_PB_SVrefine2PB10Xhap12_207:HG2_PB_SVrefine2Falcon1plusDovetail_178:HG2_Ill_SVrefine2DISCOVARplusDovetail_130;NumExactMatchSVs=9;ClusterMaxShiftDist=0.043956;ClusterMaxSizeDiff=0.03663;ClusterMaxEditDist=0.215827;PBcalls=16;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=135;DistBack=73391;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=1:16750682-16750713;PctSeqSimilarity=0.9871;PctSizeSimilarity=1;PctRecOverlap=0.8593;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=94;MatchId=64.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:27:1/1:0:18:0:7:./.:0:2:1:2:1/1:0:38:./.:.:.:.:.:.
chr1	17492452	HG2_PB_SVrefine2Falcon2Bionano_112	T	TCCCCAACACCATCCCCACCATCCTCCCTTCCATCTCCATCATCCCTACCACCATCCCCAACATCCCCACCATCATCCCCATTACAATCCCCACCACTATTTCCACCATTCCCACCACAGTCACCATCACCCCCACCATCTCCATCATCATCCCCACCATTCCCACCATCCTTACCATCAACATCACCATCCCCACCATCCCCAACACCATTCCCACCATCCCTACCATCACCATCACCATCCCCACCAACATCCCCACCACCATCCTCACTACCATCCCCACCACCATTTCCACCATTCCCACCACAGTCACCATCACCCCCACCATCCCCATCATCATCCGCACCATCCCCACCATCCCCACCACCATCTCCATTACCATCCCCACCACCATCTCCATTACCATCCCCACCACCATCCCCATTACCATCCCCACCACCATCCCCATTACCATCCCCACCACCATTTCCACCATTCCCACCATCATCCCCACCACCATCCTCGTTACCATCCCCACCACCTTTTCCACCATTCCCACCATTCCCACCATCATCCCCACCACCATCCTCGTTACCATCCCCACCACCTTTTCCACCATTCCCACCATCTCCAACACCTC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_146:HG2_PB_SVrefine2PBcRplusDovetail_166:HG2_PB_HySA_409:HG4_PB_pbsv_242:HG2_PB_PB10Xdip_718:HG2_PB_PB10Xdip_717:HG2_Ill_breakscan11_2944:HG2_PB_pbsv_234:HG2_PB_SVrefine2PB10Xhap12_211:HG2_PB_SVrefine2Falcon2Bionano_112:HG2_PB_SVrefine2PB10Xhap12_210:HG4_PB_SVrefine2PBcRDovetail_132:HG3_PB_pbsv_242;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_112:HG2_PB_SVrefine2PB10Xhap12_211:HG2_PB_SVrefine2PBcRplusDovetail_166;NumExactMatchSVs=3;ClusterMaxShiftDist=0.206442;ClusterMaxSizeDiff=0.199122;ClusterMaxEditDist=0.302594;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=618;DistBack=-288;DistForward=109;DistMin=-288;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=288;REFWIDENED=1:17492453-17492740;PctSeqSimilarity=0.962;PctSizeSimilarity=0.9968;PctRecOverlap=0.5781;SizeDiff=-2;StartDistance=-261;EndDistance=-261;GTMatch=1;TruScore=84;MatchId=65.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:2:9:1:18:1/1:4:299:4:365:./.:0:0:1/1:2:53:.:680:.
chr1	17764169	HG2_Ill_manta_30	A	AGCATGCGCCCTCGCACCCCGCCCCGGCGCCCGCCGCCCCCGCCTTCCCGGCGCGCGAGCCGGCGCAGGGCCGCACGGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_163:HG3_PB_pbsv_249:HG2_PB_pbsv_241:HG4_PB_pbsv_248:HG2_Ill_breakscan11_2945:HG2_PB_HySA_420:HG2_PB_PB10Xdip_726:HG2_PB_PB10Xdip_725:HG4_Ill_manta_38:HG4_Ill_Krunchall_219:HG4_Ill_GATKHC_299:HG4_Ill_GATKHCSBGrefine_143:HG4_Ill_Cortex_35:HG4_Ill_250bpfermikitraw_227:HG3_Ill_manta_31:HG3_Ill_Spiral_155:HG3_Ill_Krunchall_206:HG3_Ill_GATKHC_298:HG3_Ill_GATKHCSBGrefine_122:HG3_Ill_Cortex_41:HG3_Ill_250bpfermikitraw_220:HG3_Ill_150bpfermikitraw_188:HG2_PB_assemblyticsfalcon_299:HG2_Ill_manta_30:HG2_Ill_Krunchall_195:HG2_Ill_GATKHC_281:HG2_Ill_GATKHCSBGrefine_114:HG2_Ill_Cortex_57:HG2_Ill_250bpfermikitraw_220:HG3_PB_assemblyticsfalcon_301:HG3_PB_SVrefine2PBcRDovetail_151:HG3_Ill_SVrefine2DISCOVARDovetail_119:HG2_PB_SVrefine2PBcRplusDovetail_171:HG2_PB_SVrefine2PB10Xhap12_217:HG2_Ill_SVrefine2DISCOVARplusDovetail_134;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_250bpfermikitraw_220:HG2_Ill_Cortex_57:HG2_Ill_GATKHCSBGrefine_114:HG2_Ill_GATKHC_281:HG2_Ill_Krunchall_195:HG2_Ill_manta_30:HG2_PB_assemblyticsfalcon_299:HG3_Ill_150bpfermikitraw_188:HG3_Ill_250bpfermikitraw_220:HG3_Ill_Cortex_41:HG3_Ill_GATKHCSBGrefine_122:HG3_Ill_GATKHC_298:HG3_Ill_Krunchall_206:HG3_Ill_Spiral_155:HG3_Ill_manta_31:HG4_Ill_250bpfermikitraw_227:HG4_Ill_Cortex_35:HG4_Ill_GATKHCSBGrefine_143:HG4_Ill_GATKHC_299:HG4_Ill_Krunchall_219:HG4_Ill_manta_38;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0754717;ClusterMaxSizeDiff=0.0621118;ClusterMaxEditDist=0.222222;PBcalls=11;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=78;DistBack=-8;DistForward=6;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:17764166-17764177;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=66.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:24:1/1:3:16:1:8:./.:0:7:0:3:1/1:1:40:./.:.:.:.:.:.
chr1	18094810	HG2_Ill_SVrefine2DISCOVARplusDovetail_136	G	GGTGGGGATTTGACCTTGTGGCGAGGCCTGGCCTGGCAGTGTGCAGGGCTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2946:HG4_PB_HySA_340:HG4_PB_pbsv_251:HG4_Ill_svaba_244:HG2_PB_HySA_421:HG4_Ill_Krunchall_220:HG2_PB_pbsv_243:HG4_Ill_GATKHC_300:HG4_Ill_GATKHCSBGrefine_144:HG4_Ill_250bpfermikitraw_228:HG2_Ill_svaba_229:HG2_Ill_SVrefine2DISCOVARplusDovetail_136:HG2_Ill_Krunchall_196:HG2_Ill_GATKHC_282:HG2_Ill_GATKHCSBGrefine_115:HG2_Ill_250bpfermikitraw_221:HG2_Ill_150bpfermikitraw_180:HG2_10X_SVrefine210Xhap12_166;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_166:HG2_Ill_150bpfermikitraw_180:HG2_Ill_250bpfermikitraw_221:HG2_Ill_GATKHCSBGrefine_115:HG2_Ill_GATKHC_282:HG2_Ill_Krunchall_196:HG2_Ill_SVrefine2DISCOVARplusDovetail_136:HG2_Ill_svaba_229:HG4_Ill_250bpfermikitraw_228:HG4_Ill_GATKHCSBGrefine_144:HG4_Ill_GATKHC_300:HG4_Ill_Krunchall_220:HG4_Ill_svaba_244;NumExactMatchSVs=13;ClusterMaxShiftDist=0.149533;ClusterMaxSizeDiff=0.130841;ClusterMaxEditDist=0.265487;PBcalls=4;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=50;DistBack=48937;DistForward=8653;DistMin=8653;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=50;REFWIDENED=1:18094811-18094860;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=67.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:20:0|1:36:0:1:18:./.:8:0:1:7:0/1:20:29:./.:.:.:.:.:.
chr1	18186003	HG2_10X_SVrefine210Xhap12_168	G	GGGGGGCAGGGGGAGAGAGAGAGAGAGAGAGATGGGGGAGGGGGAGAGGAAGGGAGAGGGAGAGGGGGAGGAGAGAGATGGGGGAGGAGGAGAGGAGAGGGAGAGGGAGAGAGAGAAAGATGGGGGAGGGGGACAGGAGAGGGAGAGAGAGAGAGAGATAGGGGAGGGGGACAGGAGAGGGAGAGGGAGAGAGAGAGAGAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_172:HG2_PB_HySA_422:HG2_PB_SVrefine2Falcon2Bionano_117:HG4_PB_HySA_341:HG3_PB_HySA_319:HG2_PB_PB10Xdip_756:HG2_PB_PB10Xdip_755:HG2_PB_pbsv_244:HG3_PB_pbsv_251:HG4_PB_pbsv_252:HG4_PB_SVrefine2PBcRDovetail_136:HG2_PB_SVrefine2PBcRplusDovetail_173:HG2_PB_SVrefine2PB10Xhap12_219:HG2_10X_SVrefine210Xhap12_168:HG3_PB_SVrefine2PBcRDovetail_152;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_168:HG2_PB_SVrefine2PB10Xhap12_219:HG2_PB_SVrefine2PBcRplusDovetail_173:HG4_PB_SVrefine2PBcRDovetail_136;NumExactMatchSVs=4;ClusterMaxShiftDist=0.075;ClusterMaxSizeDiff=0.04;ClusterMaxEditDist=0.25;PBcalls=14;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=200;DistBack=-192;DistForward=1378;DistMin=-192;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=196;REFWIDENED=1:18186004-18186199;PctSeqSimilarity=0.9512;PctSizeSimilarity=0.995;PctRecOverlap=0.209;SizeDiff=1;StartDistance=-158;EndDistance=-158;GTMatch=0;TruScore=71;MatchId=68.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:27:1/1:0:13:1:12:1/1:1:20:0:15:./.:0:0:./.:.:.:.:.:.
chr1	18376134	HG2_PB_PB10Xdip_759	G	TGATAGTGATGGTGATGGTGCTGGTGGTGGTGGTGATGGTGCTAGTGGTGGTGATGTTGGTGATGGTGCTGGTGGTGTTGGTGATGGTGATGGTGATAGTGATGCTGGTGATGGTGATGGTGCTGGTGGTGGTGGTGCTGGTGCTGGTGGTAGTGATGATAATGGTGCTGGTTGTGATGCTGGTGATAGTGATGGTGCTGGTGCTGGTGGTAGTGATGCTGGTGATAGTGATGGTGATAGTGCTGGTGGTGATGGTGATAGTGATGGTGTTAGTGTTTGTTATGCTGGTGATGGTGATGGTGATGGTGTTGGTGTTTGTGATGCTGGTGATGGTGATGGTGCTGGTGGTGGTGATGCTGGTGATGGTGATGGTGCTGGTGGTGATGCTGGTGATGGTGGTAATGGTGATGGTAGTGATGATGCTGGTGATGATGGTGGTGCTGGTGGTGTGGTGGTGATGCTAGTCATAGTGATGGTGCTGGTGGTGATGGTGATGATGCTGGTGGTGGTAAAGCTGGTGATAGTGATGGTGATGGTTCTGGTGGTGGTGATGCTGGTGATGGTGCTGGTGGTGATGCTGGTGATAGTGACGGTGATGGTCCTGGTGGTAGTGATTCTGGTAATGGTGCTGGTGGTGATGTTGGTGATAGTGATGGTGCTGGTGCTGGTGGTGGTGATGCTGGTGATGGTGCTGGTGGGGATGGTGATGGTGATAGTTCTAGTGGTAGTGGTGCTGGTGATAGTGATGGTGCTGGTGGTGATGGTGATGGTGCTGCTGCTGGTGATGGTGATGGTGGTGGTGATACTGATGATGGTGATGGTGCTGGTGGTGATGGTGATGATGCTGGTGGTGGTGATGCTGGTGATGGTGATGCTGGGGATGGTGATGGTGACGGTGTTAGTGGTAGAGGTGCTGGTGATAGTGATAGTGCTGGAGGTGATGGTGCTGTTGCTCGTGGTGGTGCTGGTGGTGACGGTGATGGTGATGGTGGTGGTGATACTGATGATGGTGATGGTGTTGGTGCTGGTGGTGATGGTGCTGGTGGTGGTGATGCTGGTGATGGTGATGGTGGGGATGGTGATGGTGCTGGTGGTAGTGGTGCTGGTGATAGTGATGGTGCTGGTGGTGATGGTGCTGTTGCTGGTGGTGCTGCTGCTGGTAATGGTGATGGTCATGGTGGTGGTGATACTGATGATGGTGATGGTGGTGATGGTGATGGTGCTGGTGGTGGTGATGCTGGTGGTAGTGATGGTGATGGTACTGGTGGTGATAGTGATGGTGATGGTGCTGGGTGGTGATGGTGATGGTGCTGGTGGTGGTGATGCTGGTGATGGTGATGGTACTGGTTGTGATAGTGATGGTGATGGTGCTGGTGGTAATGGTGATGGTGCTGCTGCTGGTGATGGTGATGGTGGTGGTGATGCTGGTGATAGTGATGGTACTGCTGGTGATGGTGATGGTGGTGGTGATACTGATGATGGTGATGGTGGTAATGGTAATGGTGCTGCTGGTGGTGATGCTGGTGATGGTGATGGTACTGGTGGTTATGGTGATGGTGATGGTGGTGGTGATACTGATCATGGTGATGGTGATTGTGCTGCTGGTGGTGATGCTGGTGATGGTGATGGTACTGGTGGTGATGGTGATGGCGTGGAGTTGATGGTGATACTGCTGGTGCATGTGCTGGTGATGGTGCTGCTGGTGATAGTGATGATGTTGGTGGTGATGGCACTGCTGCTGATACTGATGGTGATGGTGATGGTGCTTGTGGCGGTGATGTTGGTGATAGTGATGATGACGGTGATGGTAATGGTGATGATGATGGTGATGGTGATGCTGTGGTGTTGATGGTGATACTGCTGGTGCATGTGCTGGTGATGGTGCTGCTGGTGATAGTGATGATGTTGGTGGTGATGGCATTTCTGCTAGTACTGGTGGTGATGGTGATGGTGACGGTGATAGTGCTGGTGGTGATGGTGATGGTGGTAGTGTTGGTGGTGATGGTGATGGTGATGACAGCACTGAAGTAGCTTCTGTGAGACTTATATTCATGCCCACCCCCTCGATGGCACCTCTTAACAGTCTCTAAGTTTCCAGGCTAGGAATCCTATTGTATAGATGTAGAAACTGAGGTCAAGGAGAGCAGGAACTCTCATCCAGAGTTCAGGCCTGCTACCTGCTCTGTGACCCCACATTGCTGCTCTTGTGAGCCTGAGGAGAGATAGGGGCAGCCACACCCCCGTGCTAAGGAATTGCCAAGGCTTGGGGGGTAGGCGTGGCTATGGGATCTTAGGTGGGGGCCTGCACATCCTACAGCCTCTGTTTGTCATCTGTACATTGGGGATGTTCACTCTTACCTCACCTGGGGAGGAGGAAATGAGCTAAGAGATGGACAGGGCCTGAGGGTCTGGCGTGAGCTAGGGGGTCTGTAAATGAGACCTATGGAAACCCAGGGTGGGACACTTAGAATCAGGATGCAGTGAGGCACCCAGGCCCAGGGGACAGGGGGATGTTTTTGGGTGGGGACAGATGTCGCCAACTTAGTGCTGGCATAAAACACCTTTGCCATCTTCAGCCCCTGAACAAGGCAGCCCTGCTCAGCAGCGAGTCTCCCAACCCTGACAACTCGCCCCCTTCCTTCCCTTGTTCAATATTTCCATTTCCATGCTTATCTCTTCCGTGAGCGCCTCTCCTTCTCCCTCTGCTGCCCCCTCGGCTTTTGTCTGCCAGGCTCTGGCTTCTCCATCTTTCTGCAGTACTGACAATCTCCTTTGCTCTCTCTCCCCAGGTGTGGGAGACTATTGTCCCTCCTGCTATCAGAGGCTGGCTCTGCCTTTCCCCATTTAAGACAACACTGCCCCTGCCTCTCCTTGCTCTCTCTGGGGCCCTGTGGGGGACTTGGACTCTGCCCACATCCAGTCCAAGCCTTAGTTGCTTGGGGAAGTCTCCCTTTGGTCTCCAGCCCAAAGCCCTAGGAAGCTCCCTTTAAGTGAAGAGGGACTCCTGCCTCCCACACACCCCTTCATAGAGCCCTACCCCATCTACAGGGAGGGCTCAGTATGGAACCATCCCTGCTGCAGCACATCCACCCACTTTTTACAAATCTGTCCCCCTCCCGTCTCCCAGCAGGACAGGGCCAAGGGACCACACTTTGCTATCTTCTTCTCTGCCCAGTGCAGGCACTTAGGAAGGCATGTTTGCATGCATGAGACTCTCCGGTAAATGAGCCCCTGACATAGGGGCCTCCGAGGTGGAGACAGTGCCAGCCCTGCCCCTACGCTCACCTCCGCCACTCCTCACCTCCTGCCCAGACTCAAAACAAGTGCAACAAAGCACAAAGCAATGTCCTCTCAAACCCCTGTCCCCCAAAACCCTGCCAAAGGATGCTGTGGAAAGGAGAGGGTCCTGCCCTGTGTGAGATGGGGTGGGAGGGGAGCTTCCAGAAGCTTTTGTCTTATCACGTGTAACATGGAATCATAGAACTTACAGGGCTGCTGGGAGGCCCAAATGAGTTCATAAATATAAAGCATTTGTAGCAGTGCTTGGCACATTGTAAATAAGCATAAGAGTGTAATACAAGTGTTTGCTACTGCCTTTTCTGGTAGTGGTGGTGGTGTTACTGGCGGTGATGGCAGTTGTTATTGGTGGTGGTATTATTGGCAGTGGTGGCAGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_174:HG4_PB_pbsv_254:HG4_PB_HySA_344:HG2_PB_PB10Xdip_760:HG2_PB_PB10Xdip_759:HG2_Ill_breakscan11_2947:HG2_PB_HySA_427:HG3_PB_assemblyticsfalcon_307:HG2_PB_assemblyticsfalcon_305:HG3_PB_SVrefine2PBcRDovetail_153:HG2_PB_SVrefine2Falcon2Bionano_118:HG4_PB_SVrefine2Falcon1Dovetail_173:HG2_PB_SVrefine2PB10Xhap12_220:HG2_PB_assemblyticsPBcR_287;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_759:HG2_PB_PB10Xdip_760;NumExactMatchSVs=2;ClusterMaxShiftDist=0.2525;ClusterMaxSizeDiff=0.2525;ClusterMaxEditDist=0.286814;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=3673;DistBack=2;DistForward=19;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=107;REFWIDENED=1:18376135-18376241;PctSeqSimilarity=0.9154;PctSizeSimilarity=0.8438;PctRecOverlap=0.8438;SizeDiff=-680;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=86;MatchId=69.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:40:./.:0:4:1:4:./.:141:54:147:71:./.:0:2:1/1:2:551:.:4580:.
chr1	18607617	HG2_Ill_GATKHC_288	A	ATGAATGAATGAATGAATGAATGAACAGGTAAGTGAATGAATGAATGAACAGGTGAG	20	PASS	ClusterIDs=HG2_PB_HySA_435:HG2_PB_pbsv_247:HG4_PB_HySA_353:HG2_Ill_breakscan11_2948:HG4_PB_SVrefine2PBcRDovetail_137:HG4_Ill_svaba_248:HG4_Ill_SVrefine2DISCOVARDovetail_125:HG4_Ill_Krunchall_228:HG4_Ill_GATKHC_310:HG4_Ill_GATKHCSBGrefine_146:HG4_Ill_250bpfermikitraw_237:HG4_Ill_150bpfermikitraw_215:HG2_PB_SVrefine2Falcon2Bionano_119:HG2_Ill_svaba_232:HG2_Ill_SpiralSDKrefine_151:HG2_Ill_SVrefine2DISCOVARplusDovetail_140:HG2_Ill_Krunchall_203:HG2_Ill_GATKHC_288:HG2_Ill_GATKHCSBGrefine_118:HG2_Ill_250bpfermikitraw_227:HG2_Ill_150bpfermikitraw_185:HG2_10X_SVrefine210Xhap12_169:HG2_PB_SVrefine2PB10Xhap12_221;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_169:HG2_Ill_150bpfermikitraw_185:HG2_Ill_250bpfermikitraw_227:HG2_Ill_GATKHCSBGrefine_118:HG2_Ill_GATKHC_288:HG2_Ill_Krunchall_203:HG2_Ill_SVrefine2DISCOVARplusDovetail_140:HG2_Ill_SpiralSDKrefine_151:HG2_Ill_svaba_232:HG2_PB_SVrefine2Falcon2Bionano_119:HG4_Ill_150bpfermikitraw_215:HG4_Ill_250bpfermikitraw_237:HG4_Ill_GATKHCSBGrefine_146:HG4_Ill_GATKHC_310:HG4_Ill_Krunchall_228:HG4_Ill_SVrefine2DISCOVARDovetail_125:HG4_Ill_svaba_248:HG4_PB_SVrefine2PBcRDovetail_137;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.155172;PBcalls=6;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=56;DistBack=2899;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=20;REFWIDENED=1:18607616-18607638;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=70.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:41:0|1:39:8:0:23:0|1:17:0:1:34:0/1:25:29:./.:.:.:.:.:.
chr1	18792553	HG4_Ill_250bpfermikitraw_241	A	ATTTCAAGTCTTCAAATCACTCAGCTATCCTAAGAACAGTTTTTCTTTTGTTTTTGGAGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_172:HG3_PB_HySA_328:HG2_PB_HySA_439:HG3_PB_pbsv_254:HG2_PB_pbsv_249:HG2_PB_PB10Xdip_795:HG2_PB_PB10Xdip_794:HG4_Ill_svaba_252:HG4_Ill_manta_42:HG4_Ill_Krunchall_232:HG4_Ill_GATKHC_313:HG4_Ill_GATKHCSBGrefine_149:HG4_Ill_250bpfermikitraw_241:HG4_Ill_150bpfermikitraw_218:HG3_Ill_svaba_245:HG3_Ill_scalpel_171:HG3_Ill_manta_33:HG3_Ill_Krunchall_215:HG3_Ill_GATKHC_308:HG3_Ill_GATKHCSBGrefine_126:HG3_Ill_250bpfermikitraw_231:HG3_Ill_150bpfermikitraw_199:HG2_Ill_svaba_237:HG2_Ill_scalpel_162:HG2_Ill_manta_33:HG2_Ill_Krunchall_206:HG2_Ill_GATKHC_292:HG2_Ill_GATKHCSBGrefine_121:HG2_Ill_250bpfermikitraw_232:HG2_Ill_150bpfermikitraw_191:HG4_PB_HySA_355:HG4_PB_SVrefine2PBcRDovetail_139:HG4_PB_SVrefine2Falcon1Dovetail_174:HG4_Ill_SVrefine2DISCOVARDovetail_127:HG3_PB_SVrefine2PBcRDovetail_155:HG3_Ill_SVrefine2DISCOVARDovetail_125:HG2_PB_SVrefine2PBcRplusDovetail_176:HG2_PB_SVrefine2PB10Xhap12_223:HG2_PB_SVrefine2Falcon2Bionano_120:HG2_Ill_SVrefine2DISCOVARplusDovetail_142;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_191:HG2_Ill_250bpfermikitraw_232:HG2_Ill_GATKHCSBGrefine_121:HG2_Ill_GATKHC_292:HG2_Ill_Krunchall_206:HG2_Ill_manta_33:HG2_Ill_scalpel_162:HG2_Ill_svaba_237:HG3_Ill_150bpfermikitraw_199:HG3_Ill_250bpfermikitraw_231:HG3_Ill_GATKHCSBGrefine_126:HG3_Ill_GATKHC_308:HG3_Ill_Krunchall_215:HG3_Ill_manta_33:HG3_Ill_scalpel_171:HG3_Ill_svaba_245:HG4_Ill_150bpfermikitraw_218:HG4_Ill_250bpfermikitraw_241:HG4_Ill_GATKHCSBGrefine_149:HG4_Ill_GATKHC_313:HG4_Ill_Krunchall_232:HG4_Ill_manta_42:HG4_Ill_svaba_252;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.193548;PBcalls=13;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=59;DistBack=-50;DistForward=48;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=69;REFWIDENED=1:18792540-18792608;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=72.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:0:16:1:24:./.:1:22:3:19:1/1:1:44:./.:.:.:.:.:.
chr1	19252242	HG2_PB_SVrefine2PB10Xhap12_225	A	AATGGATTGGTTGGATGGATGGATGGATGGATGGATTGGTTGGATGGATGGATGGATTGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATTGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATTGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATTGGTTGGATGGATGGATGGATGGATGGATGGATGGATTGGTTGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATTGGTTGGATGGATGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGTTGGATGGATGGATGGATGGATGGATTGGTTGGATGGATGGATGGATGGTTGGATGGATGGATGGATGGATGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATTGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGTTGGATGGATGGATGGATGGATGGAGGGATGGATTGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGTTGGATGGATGGATGGATGGATTGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATTGGTTGGTTGGTTGGATGGATGGATGGATGGATGGATGGATGGATGGATTGGTTGGATGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_157:HG2_PB_HySA_446:HG4_PB_pbsv_264:HG3_PB_HySA_333:HG4_PB_pbsv_263:HG4_PB_SVrefine2Falcon1Dovetail_176:HG2_PB_pbsv_254:HG3_PB_SVrefine2Falcon1Dovetail_175:HG3_PB_pbsv_257:HG2_PB_SVrefine2PBcRplusDovetail_178:HG2_PB_SVrefine2PB10Xhap12_225:HG2_PB_SVrefine2Falcon2Bionano_122:HG4_PB_SVrefine2PBcRDovetail_141;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_225;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0952994;ClusterMaxSizeDiff=0.0901481;ClusterMaxEditDist=0.278884;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=754;DistBack=49086;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=402;REFWIDENED=1:19252243-19252644;PctSeqSimilarity=0.9839;PctSizeSimilarity=0.9831;PctRecOverlap=0.8501;SizeDiff=-13;StartDistance=-109;EndDistance=-109;GTMatch=1;TruScore=93;MatchId=73.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:0:31:0:16:1/1:4:180:4:245:./.:0:2:0/1:5:35:.:884:.
chr1	20259338	HG2_Ill_SVrefine2DISCOVARplusDovetail_147	C	CACCACATCATCATCCTCATCACCATTATCATCACCATCAACATCACTGTCATCATCACCATCATCATTATCACCATCACCATCATTATAGTTACCATCACCATAATTATCACCATCAACATCACCATCGGTGCCATCAACATCATCATCATCACCATCACCATCATCATCATCATTACCATTACCATCACCATCATCATCTTCACCATCACCATTGCACCATCACCATTATCATCATCATAATCACCATCAACATCACCATAATAATCATCACCATTATCATCATTATCACCATCACCATCATCATCATCATTACCATT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_177:HG2_PB_PB10Xdip_872:HG2_PB_PB10Xdip_871:HG4_Ill_GATKHCSBGrefine_151:HG3_Ill_MetaSV_52:HG3_Ill_GATKHCSBGrefine_128:HG2_PB_SVrefine2PB10Xhap12_229:HG2_PB_SVrefine2Falcon1plusDovetail_180:HG2_Ill_SVrefine2DISCOVARplusDovetail_148:HG2_Ill_GATKHCSBGrefine_125:HG4_PB_HySA_368:HG2_PB_HySA_454:HG2_10X_SVrefine210Xhap12_176:HG3_PB_pbsv_261:HG4_PB_SVrefine2PBcRDovetail_142:HG4_PB_pbsv_266:HG4_PB_SVrefine2Falcon1Dovetail_178:HG2_PB_pbsv_257:HG4_Ill_SVrefine2DISCOVARDovetail_133:HG3_PB_SVrefine2PBcRDovetail_159:HG3_Ill_SVrefine2DISCOVARDovetail_133:HG2_PB_SVrefine2PBcRplusDovetail_181:HG2_PB_SVrefine2PB10Xhap12_228:HG2_PB_SVrefine2Falcon2Bionano_125:HG2_Ill_SVrefine2DISCOVARplusDovetail_147;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_147:HG2_PB_SVrefine2Falcon2Bionano_125:HG2_PB_SVrefine2PB10Xhap12_228:HG2_PB_SVrefine2PBcRplusDovetail_181:HG3_Ill_SVrefine2DISCOVARDovetail_133:HG3_PB_SVrefine2PBcRDovetail_159:HG4_Ill_SVrefine2DISCOVARDovetail_133:HG4_PB_SVrefine2Falcon1Dovetail_178:HG4_PB_SVrefine2PBcRDovetail_142;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0728376;ClusterMaxSizeDiff=0.0698027;ClusterMaxEditDist=0.227474;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=319;DistBack=58702;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=124;REFWIDENED=1:20259339-20259462;PctSeqSimilarity=0.9682;PctSizeSimilarity=0.9815;PctRecOverlap=0.7262;SizeDiff=-6;StartDistance=-86;EndDistance=-86;GTMatch=0;TruScore=89;MatchId=74.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:70:1/1:0:8:0:15:1/1:1:28:0:46:1/1:0:13:1/1:1:61:.:.:.
chr1	20790032	HG2_Ill_GATKHCSBGrefine_127	A	ACATTATTATCACCACCATCACCATCATCAGCATTACTGCTACAATCACCTTCATAGCCACCACCACCATCACCATCATCACCATCACCACTACCATCATCATCATTACCATCATTATCACCATCATCACCATCACCTCTACCATCATCATCATTACCATCAATATCACCATCATCACCATCACCACCACCAGCCTCATCACCATTACCACCACCAGCATCATCACCACCACCACCAACAACAACAACAATAATAACAACAGCATCATCACCACCACCACCACTACCACCAACAGCATCATCACCACCACCACCACCACCACCAACAGCATCATCACCACCACCACCAACAACAGCATCATCACTGCTACCACCACCAACAACAGCAACAGCATCATCACCATCACCACCACCACCACTACCACCAACAGCATCATCACCAACATCACCACCACCACCACTACCACCAATAACATCATCACCAACATCACCACCACCACCACCACTACCACCAACAGCATCATCACCAACATCATCATCACCACCATCAGCAGCAGCAGCATCACCATTACTATCACCATCATAACCACCACCACCATCATCATCACGACCACCACCATCACTACTATCATCATCATTATCACCATCACCACCATCACCACCACCACCATCATCATCACCACCACCATCACCACCAACAACAACATTGTCACCATCATCAGCATCACTGCTATCACCATCATAGCCACCACCACCACCACTACTATCATTATCATCATTACCATAATTATCACCACCATCACCATCACCCATCACCACCATCATCACCACTACTACCAATATTATCATCACCACCACCATCATTATCACCACCATCATCACCACCATCACCACCATCATCACCACCATCACCAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_127:HG2_Ill_breakscan11_2950:HG2_PB_PB10Xdip_909:HG2_PB_PB10Xdip_908:HG2_PB_HySA_457:HG3_Ill_GATKHCSBGrefine_131:HG4_Ill_GATKHCSBGrefine_153:HG4_Ill_MetaSV_45:HG2_Ill_MetaSV_46:HG2_Ill_GATKHCSBGrefine_127:HG3_Ill_MetaSV_55:HG4_PB_HySA_373:HG4_PB_HySA_372:HG3_PB_pbsv_264:HG4_PB_pbsv_268:HG2_PB_SVrefine2PBcRplusDovetail_183:HG2_PB_pbsv_259:HG3_Ill_SVrefine2DISCOVARDovetail_139:HG2_PB_SVrefine2PB10Xhap12_231:HG4_PB_SVrefine2Falcon1Dovetail_180:HG4_PB_SVrefine2PBcRDovetail_144:HG2_Ill_SVrefine2DISCOVARplusDovetail_152:HG3_PB_SVrefine2PBcRDovetail_161:HG2_PB_SVrefine2Falcon1plusDovetail_182:HG3_PB_SVrefine2Falcon1Dovetail_179;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_127:HG2_Ill_MetaSV_46:HG4_Ill_MetaSV_45;NumExactMatchSVs=3;ClusterMaxShiftDist=0.103149;ClusterMaxSizeDiff=0.100595;ClusterMaxEditDist=0.227875;PBcalls=16;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=913;DistBack=-1;DistForward=4303;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=302;REFWIDENED=1:20789925-20790226;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=75.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:1:19:0:18:./.:37:155:48:144:1/1:0:22:1/1:10:198:.:1160:.
chr1	20944737	HG3_PB_pbsv_267	G	GCACTGTTCAAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCGCTGTCGCCCAGGCTGGAGTTGCAGTGGCGCAATCCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCATCCCGATGGTAAGCGTGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTAATTTTTAGTAGAAGACGGGGTTTCACCGTGTTTAGCCAGGATGGTGCTCGATCTCCTGACCTCGTGACCGCCGCCTCGGCCTCCCAAAAGTGCCTGGGATTAGCAGGCGTGAGCCCACCGCGCCCGGC	10	PASS	ClusterIDs=HG3_PB_pbsv_267:HG2_PB_pbsv_261:HG2_PB_HySA_460:HG2_PB_SVrefine2Falcon2Bionano_128:HG2_PB_SVrefine2Falcon1plusDovetail_183:HG4_PB_SVrefine2Falcon1Dovetail_182;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_267;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0778443;ClusterMaxSizeDiff=0.0718563;ClusterMaxEditDist=0.150221;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=332;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=1:20944738-20944751;PctSeqSimilarity=0.9665;PctSizeSimilarity=0.9699;PctRecOverlap=0.97;SizeDiff=10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=76.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:21:0|1:30:1:0:18:1|0:0:7:27:0:0/1:27:8:0/1:9:16:.:1719:.
chr1	20950239	HG4_PB_HySA_376	G	GAAGTGGCTGGGATTACAGGCATAAGCCACGCGCCTGGCCAAGCGTGTGTTTCTATTGTCCAGCACTGTCTGTGATTTTTAGGACCCTAAAGCACAGTCCCAGATTCCCGTGGAAATTAACAGAAGCATGTATATGTCTGCTGCTCTCTGGCCAGCTGCTGCTAATTGCTCATGTAAACCATGTGACTCTTTAGTGTTTCCTTTTGGCAGGGAGGAGAGCACGGCTATAACTGACAGGTATTCGGGGTACTTTGGATCTCTGTGTCTGAAATAAAGCCAGAGAACACTGTTCAAGAATAAATAATGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCAACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAAAACACAAAAAAATTAGCCGCGGCGTGGGTGGCGGGCGCCTGTAGTCCCAGCTACGCGGTGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAAATAATGGAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCAGCACTTTGGAAGGCCGAGGCGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGGCGGGCGCCTGTAGTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCTGCAGTCCGGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAATAAATAATGGAAAAAACAATGGAATGGCCTAATAAGTCTCTCATGTGTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGAGATCTTGGCTCACTACAAGCTCCGCCTCCTGGGTTCATGCCATTCTCCTGCCTCAGCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCACACCCAGCTAATTGTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCCATGTTAGCCAGGATGGTCTCGATCTCCTAACCTCGTGATCCACCCACCTTGGCCTCCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_147:HG4_PB_pbsv_271:HG4_PB_HySA_377:HG4_PB_HySA_376:HG2_PB_HySA_461:HG2_PB_PB10Xdip_910:HG2_PB_PB10Xdip_911:HG2_PB_pbsv_262:HG2_PB_SVrefine2PBcRplusDovetail_184:HG2_PB_SVrefine2Falcon1plusDovetail_184:HG2_PB_SVrefine2PB10Xhap12_234:HG2_PB_SVrefine2PB10Xhap12_233:HG3_PB_SVrefine2Falcon1Dovetail_182:HG2_PB_SVrefine2Falcon2Bionano_129;NumClusterSVs=14;ExactMatchIDs=HG4_PB_HySA_376;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0460218;ClusterMaxSizeDiff=0.0436817;ClusterMaxEditDist=0.154615;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1280;DistBack=-34;DistForward=17;DistMin=-34;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=305;REFWIDENED=1:20949969-20950273;PctSeqSimilarity=0.9874;PctSizeSimilarity=0.9875;PctRecOverlap=0.9875;SizeDiff=16;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=77.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:45:1/1:0:20:0:18:./.:1:10:2:5:1/1:1:19:0/1:22:133:.:1719:.
chr1	21292127	HG3_Ill_svaba_259	C	CTGCCTCAATACCCCTTTCCCTTTCATTTTGTGAATACCCATGAAAGTTAGATCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_183:HG3_PB_HySA_350:HG2_PB_pbsv_264:HG2_Ill_breakscan11_2951:HG2_PB_HySA_463:HG3_Ill_svaba_259:HG3_Ill_SVrefine2DISCOVARDovetail_145:HG3_Ill_Krunchall_235:HG3_Ill_GATKHC_331:HG3_Ill_GATKHCSBGrefine_138:HG3_Ill_250bpfermikitraw_246:HG3_Ill_150bpfermikitraw_216:HG2_Ill_svaba_248:HG2_Ill_Krunchall_221:HG2_Ill_GATKHC_313:HG2_Ill_GATKHCSBGrefine_131:HG2_Ill_250bpfermikitraw_252:HG2_Ill_150bpfermikitraw_209;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_183:HG3_Ill_svaba_259:HG3_Ill_SVrefine2DISCOVARDovetail_145:HG3_Ill_Krunchall_235:HG3_Ill_GATKHC_331:HG3_Ill_GATKHCSBGrefine_138:HG3_Ill_250bpfermikitraw_246:HG3_Ill_150bpfermikitraw_216:HG2_Ill_svaba_248:HG2_Ill_Krunchall_221:HG2_Ill_GATKHC_313:HG2_Ill_GATKHCSBGrefine_131:HG2_Ill_250bpfermikitraw_252:HG2_Ill_150bpfermikitraw_209;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0366972;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.109091;PBcalls=3;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=54;DistBack=8111;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=1:21292128-21292181;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=78.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:28:0|1:29:2:0:26:1|0:0:19:18:0:0/1:25:34:./.:.:.:.:.:.
chr1	21492589	HG3_PB_HySA_352	G	GAACTATAGTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGCGGGATCTCGCTCACTGCAAGCTCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGCTAATTTTTGTATTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGTCTCGATCTCCTGACCTCGTGATCCGCCCGCTCGCCTCCAAAGTGCTGGATTACAGGCGTAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG2_PB_HySA_467:HG3_PB_pbsv_273:HG2_PB_pbsv_268:HG3_PB_HySA_352:HG2_PB_SVrefine2Falcon1plusDovetail_187:HG3_PB_SVrefine2PBcRDovetail_167;NumClusterSVs=6;ExactMatchIDs=HG3_PB_HySA_352;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0956938;ClusterMaxSizeDiff=0.092504;ClusterMaxEditDist=0.1408;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=302;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=1:21492590-21492600;PctSeqSimilarity=0.9696;PctSizeSimilarity=0.9467;PctRecOverlap=0.9498;SizeDiff=-17;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=95;MatchId=79.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:0|1:22:3:6:25:./.:2:15:30:0:0/1:32:7:0/1:12:9:.:.:.
chr1	21902717	HG2_Ill_GATKHC_324	A	ATGGATGGATGGATGGATGGATGGATGGATGGATGATGGATGGATGGATGGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_186:HG2_PB_assemblyticsfalcon_340:HG2_PB_pbsv_274:HG4_Ill_GATKHC_346:HG2_PB_HySA_477:HG4_Ill_GATKHCSBGrefine_170:HG2_Ill_scalpel_176:HG2_Ill_GATKHC_324:HG4_PB_SVrefine2PBcRDovetail_152;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHC_324:HG2_Ill_scalpel_176:HG4_Ill_GATKHCSBGrefine_170:HG4_Ill_GATKHC_346;NumExactMatchSVs=4;ClusterMaxShiftDist=0.15534;ClusterMaxSizeDiff=0.135922;ClusterMaxEditDist=0.296296;PBcalls=4;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=51;DistBack=24;DistForward=46;DistMin=24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=30;REFWIDENED=1:21902716-21902748;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=80.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:33:1|0:8:26:28:5:./.:11:5:0:16:0/1:15:11:./.:.:.:.:.:.
chr1	22896933	HG3_Ill_250bpfermikitraw_261	G	GCATACTTGAGTTCTTTCATGTCCACGTTCAGCTTCTATGGCTCTGAGGACAGAAGGATAATAATATTAATAATGATGATGATAACGACACCAA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_268:HG3_PB_pbsv_282:HG3_Ill_SVrefine2DISCOVARDovetail_155:HG2_Ill_SVrefine2DISCOVARplusDovetail_163:HG3_PB_SVrefine2PBcRDovetail_170:HG3_PB_HySA_362:HG2_PB_pbsv_276:HG2_PB_HySA_485:HG3_Ill_Krunchall_250:HG3_Ill_250bpfermikitraw_261:HG2_Ill_Krunchall_240;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_268:HG3_Ill_Krunchall_250:HG3_Ill_250bpfermikitraw_261:HG2_Ill_Krunchall_240;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0638298;ClusterMaxSizeDiff=0.0421053;ClusterMaxEditDist=0.3125;PBcalls=5;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=93;DistBack=101974;DistForward=20;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=95;REFWIDENED=1:22896934-22897028;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9892;PctRecOverlap=0.3978;SizeDiff=1;StartDistance=-56;EndDistance=-56;GTMatch=0;TruScore=79;MatchId=81.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:26:0|1:36:0:2:28:./.:2:20:5:0:0/1:19:22:./.:.:.:.:.:.
chr1	22904269	HG4_Ill_SVrefine2DISCOVARDovetail_148	G	GTGTGCATGTGTGCGTGTGTGCGTAAGTGTATGTGTGCATGTGTGTGCATGTGTGCGTGTGTGCATGTATGTGTGCATGCGTATGTATGCATTGTGTGGGCCTGTGTTCATGAGTGTGTGCATGTGTGTGTATGTGTGCGTGAGTGTATGTGTGCGTGAGTGTATGTGTGCGAGTGTATGCATGTGTGTGCATGTGCGTATGTGTGCATGTGTGCATGTGTGCGTGTGTATGTGTGCATGTGTGCGTGAGTGTATGTATGCATGTGTGTGCATGTGCGTAAGTATGTGCATGTGTGTGCATGTGTGCGTGAGTGTATGTGTATGTATGCGTGTGTGTGCATGTGTGCGTGAGTATGTGCATTGAGTGCATGCACATGTGTGCATGAGTATGTATGCGTGTATTCATGTGTGTGCATGTGCGTGAGTGTATGCATGTGTGCATGTATGCGTATGTATGCATGCGTGTGCATGTGTGTGACTATGTATGCATGTGTGTATGTGCATGTGTGTGAGCGTATGTATGCATGTGTGTGCCTGTGTGCGAGTGTACGCATATGTGCGCATGTGTGCGTGAATGTGCATGTGTGCATGTGTGCATTTTTGTATGCATGTGTTTGCGCATGTGTGCGTTGAGTATTGTGCATGTGTGCATGAGTGTATATGTGCATGTGTACGTGTGCATGTGTGCGTGGGTGTATGCATGTGCGTGTGCATGAGTGTATGTGTGCGTTTGTGTGCGTGTGCGTGAGTGTACCAATGTGTGTGCATGAGTGTGTGCATATGTGTGCATGAGTGTATGTGTATGTGCATCTGTGCAGTTGTGTGCATCTGCGTGAGTATGTGCATGTGTGCGTGAGTGTATGTATGCATGTCTATGTATACGTGTGCATGTGTGTATGTGTGCGTGTGTGCATATGTGCGTGAGTGTGCATGTGTGCATGTGTGCATGAGTGTATGTATGCATGTATGTGTGTGCCTGTGTGCATGTGTATGTGTGCCTGTGTGTGTGCCTGTGTGCATGTGCGTGAGTGTATGTGCGTGCGTGTGTGTGTGCAATGTGCGTGTGCATGTGTGTGAGTGTATGCATGTGTGCGTGCACATGTGTGCGAGTGTATGTGTGCATGTGTGCATGAGTGTTCATGTGTGTGCATGTGCATGAGTGTATATATGCGTGAGTGTATGCATGTGTGCGTGTGTGCATGTATGTGCATGTGTGCGTGAGTGTACGCATGTGTGCATGAATGTGTGCATGTGTGCATTTTTGTATGCATGTTTGCGCATGTGTGCGTTGAGTAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_191:HG2_PB_pbsv_277:HG4_PB_pbsv_287:HG3_Ill_GATKHCSBGrefine_150:HG3_PB_pbsv_283:HG4_Ill_GATKHCSBGrefine_173:HG3_PB_HySA_363:HG4_PB_HySA_395:HG2_PB_PB10Xdip_995:HG2_PB_PB10Xdip_996:HG2_PB_HySA_486:HG2_Ill_breakscan11_2952:HG3_PB_SVrefine2PBcRDovetail_171:HG3_Ill_SVrefine2DISCOVARDovetail_156:HG3_PB_SVrefine2Falcon1Dovetail_191:HG2_PB_SVrefine2PB10Xhap12_245:HG4_PB_SVrefine2Falcon1Dovetail_189:HG4_PB_SVrefine2PBcRDovetail_154:HG4_Ill_SVrefine2DISCOVARDovetail_148:HG2_Ill_SVrefine2DISCOVARplusDovetail_164:HG2_10X_SVrefine210Xhap12_190:HG2_PB_SVrefine2Falcon1plusDovetail_192;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_190:HG2_Ill_SVrefine2DISCOVARplusDovetail_164:HG4_Ill_SVrefine2DISCOVARDovetail_148:HG4_PB_SVrefine2PBcRDovetail_154;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0852655;ClusterMaxSizeDiff=0.0837696;ClusterMaxEditDist=0.273387;PBcalls=15;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1295;DistBack=7261;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=372;REFWIDENED=1:22904270-22904641;PctSeqSimilarity=0.9821;PctSizeSimilarity=0.9969;PctRecOverlap=0.8337;SizeDiff=-4;StartDistance=-214;EndDistance=-214;GTMatch=0;TruScore=93;MatchId=82.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:0:31:3:18:1/1:0:10:0:11:./.:0:3:1/1:3:124:.:1609:.
chr1	23276940	HG3_Ill_manta_42	G	GTGCAGTGGTGCAATCACAGCTCACTGCAGCCTCGACCTCCAGAGTTCAAGCAATCCTCCCACCTCAGCCTCCCCAGTAGCTGGGATTATAGGCACACACCACCAAACCTCTAATTTTTGTATTAGAGATGTATTAGAGATGAGGGCTCACTCTACAGAAGATACAAAAGTTAGCCAGGTTTGGTGGTGTGTGACTATAATCCCAGCTACTGGGGAGGCTGAGGTGGGAGGATTGCTTGAACTCCGGAGGTCGAGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2953:HG3_PB_pbsv_287:HG4_PB_pbsv_290:HG2_PB_pbsv_280:HG2_PB_assemblyticsfalcon_353:HG2_PB_assemblyticsPBcR_337:HG3_PB_assemblyticsfalcon_356:HG2_PB_PB10Xdip_999:HG2_PB_PB10Xdip_1000:HG3_Ill_SVrefine2DISCOVARDovetail_157:HG3_Ill_MetaSV_60:HG2_PB_SVrefine2Falcon1plusDovetail_194:HG2_Ill_SVrefine2DISCOVARplusDovetail_167:HG2_Ill_MetaSV_50:HG2_PB_SVrefine2PBcRplusDovetail_193:HG2_PB_SVrefine2PB10Xhap12_247:HG4_Ill_MetaSV_53:HG4_PB_SVrefine2PBcRDovetail_156:HG4_PB_SVrefine2Falcon1Dovetail_191:HG4_Ill_SVrefine2DISCOVARDovetail_149:HG4_Ill_GATKHCSBGrefine_176:HG3_PB_SVrefine2PBcRDovetail_173:HG3_PB_SVrefine2Falcon1Dovetail_193:HG3_Ill_manta_42:HG3_Ill_GATKHCSBGrefine_153:HG2_Ill_manta_43:HG2_Ill_GATKHCSBGrefine_142:HG4_PB_HySA_400:HG2_PB_HySA_491:HG3_PB_HySA_369;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_142:HG2_Ill_manta_43:HG3_Ill_GATKHCSBGrefine_153:HG3_Ill_manta_42:HG3_PB_SVrefine2Falcon1Dovetail_193:HG3_PB_SVrefine2PBcRDovetail_173:HG4_Ill_GATKHCSBGrefine_176:HG4_Ill_SVrefine2DISCOVARDovetail_149:HG4_PB_SVrefine2Falcon1Dovetail_191:HG4_PB_SVrefine2PBcRDovetail_156;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0889749;ClusterMaxSizeDiff=0.0889749;ClusterMaxEditDist=0.198874;PBcalls=18;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=256;DistBack=3704;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=1:23276941-23276947;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=83.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:25:0:32:1/1:0:12:0:13:1/1:1:31:./.:.:.:.:.:.
chr1	23603556	HG2_PB_SVrefine2PBcRplusDovetail_195	A	ACGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGTCGTGGTGGTGCATGCCTGTGGTCCCAGCTACTCAGGAGGCTGAGGCATGAGAATTGCTTGAACCTGGGAGACGGAGGTTGCAGTGAGCCAGGAGCACACCACTGCACTCCAGCCTGGGCAATAGAGCAAGACTCAGTCTTTTTTTAAAAAAAAAAAAAAAAAAGCATTATTATCTTCTCAAACGTAAGAGTCACACTTTTTGGACCACAGGTGAATAATTCTGCAGACTATACCATAATGGCACTCATCATAGGTCCTCCTGAGGACTGAATCTGGATGAAGATGTTAGTAACTGTGAATGTGTGAGTTCTATGAAAGACACAGGAAAGTCCAGGGTTGTGAGTAGACTTTCCCCCCTCACTGCCAGTTTCTCATTTATAGGGTTTTCCCCCAACAAAATATGCAGGTATCATCTGTTTCAGAGAATCATACTTCAGATAATCCCCAAGGTCCCTTTCAGCTCTAGACTGACACCCCATTTTCAGGAAGAAGAAAGCAGCTCAGAAAGAATAAATGAATTGTGTAAGGGACACACCAGGAGAGCTAGGAAACAGGAAAACTTGGAGTCTATCTTAGCCACCAGAAACCACCTGCCCCCAGCCCCCAGCTTTCTCACTCAGCAGCTCATCACTGTATTCCAGAAGCTCCCCAGAGGACAAAAGCACAGAAGTTATCTCATCTGAAAATAAAACATTTTACCCTATTATTCTCCAGGGACAATTATGGAGCATTTCTTGCTATCATTCTGCAACTCCAAATAAGTTTAGGTTCCCATAGCAACACTCTGCTCTGGAAACTGGCATTGTTCCCCAGTCCATGTGGGAAGAAACAAGAGCTTCTCCTAGAACACTCACAGCAGGTGGGAGAGGCCATGGCATGGAGTGTGGAGACAGTTGCTGAGGACTTTGTCCAGCCAAAGATAAGGAACCTACTTTAGTCACCCGTGAGTGACTAATGCTTGATCATCCTGGATGGACCCCAACAAGGGAAGTCTGCCAAGAAAGTCTCCGCATTGCAGGAAGCATTGAGCCCAAGCAAGAAATTAAGACCCTAAGCTCCATCGAGTCAAAGAAACGTAGACTAAACTTTGCTAAAGTACACAGTGTTTTCATAGCAAAGGTGTTGCAAACACAAAGGTTTAGTTGGTAGACAAATTTAGAGGCCGATCACATGCTGAATGATTTGGGGCTTGTGTACTGATGTCTATAACTTACTCTAGAAGAAAACTGTTCCTCTATTCACAACGCTTCTGACACCAAATGTAAGGGTTTTTTTTTTTTCCACACTAATAATCAATTCCCCAAATCTCTGGACTCTAACTGAGTGTCCAGAGATTCAGTTCAGTTCTGACACTGACTGCCCAGAGTGGGCGCAGACCCCACAGGTTAAGGGCTCAGTCCTGCAGCACTACCCCCAGTTGCAAGGCCTGGCCTCCTCCTATATTTCTGATGGAGCAGCTATAAATTGGGAGTTTCCATAACCCCCTTCATAGGTTCAATAATTTGCTAGAACAGCTCACAGAAATCAGGGAAACTCTTCAGTAGCTTTTTTTTTTTTTTTTAAGATGGAGTCTCATTTTGTCACCCAGGCTGGAGTGCAGTGGTGCTATCTCAACTAATTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGTGTGCCACCAAGCCCGGATAATTTTAGTATTTTTAGTAAAGACAGGGTTTCCCCATGTTGGTCAGGCTGGTCTTGAACTCCTGACATCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCATGGCGCCCAGCCAACACTTTAGTTTTTATAGAGGATACAACTCAAGAACAGCCAAATAGAAGAGATGCACAGGGCAGGGTAGGATATGAGGGGCGGAGCCTCCCTGTCTTCTCCAGCGGTGCCACCTCCCAGCACCCGGTTGTGCTCACCAACCCAGAAGCTCATCAGATCTCATTGATAAGTTTTTATAGAGCTTAATCTCTGGCTCCCTCTTCCCTTCCTGGAGGTTTGTGGTTGGGGCTAAAAGTTCCAACCCTCTAATCATTTTTTTTTTTTTTTTTTTTTGGTAGAGCCAGGGTCTCACTATGTTGCCCAGGCTGATCTTGAGCTCCTCATCTCAATCAATCCTCCTGCTTTGGCATCCCAAAGTGCTGGGATTACAGGAATGAGTAACCTCACCTGTCCCATCCCGAGACTAAATTTAGAGTCCCTACAGTAAGTCACCTCATTAGCATAAACTGAGGTGTATAAGGAGGGTCCTTACGAATAACAAAATACACTCTTACCAGGAAATTCTCAGGGTTTTAGGAGTTCTGTGCCAAGAACCTGAGCAAAACCAAATATATCTCATCATACCACATTTATTTTGAGATGGATCACAGGAACATTTTCAGAGGGGTATAAACCAAAGCAACTCCATCTTGAATAGGAGCTGGGTAAAATAAGGCTGAGACCTACTGGACTGCATTTCCAGTGGACGGTGAAAGCGTTTTAAGTCGCGGGATGAGACAGGAGGTCAGCACAAAATATAGGTCATAAAGACCTTGCTCATAAAACAGGTTGCAGTAAAGAAGACGGCCAAAACCCACCAAAAACAAGATGGCCATGAGAGTGACCTCTAGTCATCCTCACTGCTACATTCCCACCAGCGCCATGAAAATTTACAAATGCCGTGGCAACGTCAGGACTCTATATGGTCTAAAAAGAGGAGACATAAATATTCCACCCCTTGTTTAGCATATCATCAAAAATAACAATAAAAATAAGCAAACAGCAGCCCTCGGGGCTGCTCTGTCTATGGAGTAGCCATTCTTTTATTCTTTTACTTTCTTAATAAACTTGCTTTCATTTTACTCTACGGACTCACCCTGAATTCTTTCTTGCATGAGATCCAAGAACCCTCTCTTGGGGTCTGGATCAGGACCCCTTTCCTGTAACAATATGACGAATTGATTGATGGGGGGATGGATAGACACATACTACAGTAAAATATTAATTGTAGCACCTAGGTGGTTGGTATAAGTAGTCACTGTAAATTTTTTTTAAGAGACGAGATCTCACTCTGTCACCAGGCTGGAGTGCAGTGGCCCAAAGATTTCGATTGAATTAGGTTGAAATTATTGAAATATATCTTGGTGTTAAAAGGAACCCAAAGGAATTTTTTTAAAATACCAAATTAAATGTCAGTTATTGTTTTGGAATTGGTTACTGTTACCCTATCATACATTTATGTAAAATAAGCACTTATAAAGGGCAGGGTAGAATTAAACAAGTGTATTTTAGCCAGGAAGTTGAATATCCCAAAAATGGAATCTCAAGCTGGCAGTTTTTGAATGCTAGAGCCTATCACTCAAGTCCCGGGGCTGGTGGAATATATAGTTAGAAAATTTAAGCTTGATGCTCCTTCTTTTACAGTGTTCAAAACAAGTGAGGGTCAGGGTAAAAACAAAAAAAATTTAAGGCCAGTCATGGTGGCTCCCACCTATAATTCCAGGTCTTTGGGAGGCTGAGGAAGGAGGATCAATTGAACCCAGGAGTTGGAGACCAGCCTGAGCAATATAGGGAAACCCATCTCTGCAAAAAATTAGAAGAGTTAAAACCACTGGTGTGTACAGTGTATTTGTGAAACGCAGAGTAGCTCACAAAAAAAATTTATCTTCAAATTTCAAAGATCATTTTATCTCAAAGATTAAAATTTGAAGATAAATTTTTTTGTGAGCTACTCTGCGTTTCACAAATACACTGTACACACCAGTGGTTTTAACTGTTCTAGAAAGCAACCAAGACTTATAACCTGTGAAAATGGGGCCACCTGGTGGTCAGAGTTAGGAACAGTCTAATAACGTCTTTCCAGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGGAGATCACAAGGTCAGAATTTCGAGACCATTCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAATGCAAAAAAGTAGCCGGACGTGGTGGCACGCGCCTGTAGTCCCAGCTACTCGGGATCCCAGCTGAGGTAGGGGAATCGCTTAAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCATGCCACTGCACTCCAGCCTGGCGACAGAGCAAGACTCCGCCTCAAAAAAATAGAAATAAAAATAACGTCTTCCCTACTAACTTCCTCCCATCCCACCCTACTCCTTTTCTGAACACTATCTGCTAGTCCCTTTTCCCACCATTTCTAGTTGTTCAACATTTATAAGGAACCTGATATACTAGAAAGCATAGGAGCTGGAGCCAGAACTGATCACCATACTTCTATTTCTTTATATCCCCCCATGCACCTAGTGTTAGTTTTGAACATAAGTTCTCACAAAGACTTGCTCATTATCCAAAAGACTCAGAGACCAAACTGTTTTCCATTCAGTGCCTTCATATACTTAAGATGATTGTTGTCATCTTGTCTAATATGGGAAATCCCAATATTAAATGATTTCTTTCTTAGGGTCTGAAAGATTTTCTCACAATCTTCTAATTGAAACAGGAAATACCCACAGGAGTGGTAACTTAAATGCAAAGGCTTGGGTTCTGATATTTCCTGTCAGTTTCCTAATTATGTGATTTAGGGAAATCACTCCCTTTGAGTCTGCTTTTCTTAGATGTCATCTGCTGCCCTCCTTCTAGGTTGTTGCTTTTTTTTTTTTTTTTGAGACAGAGCTCTGTTGTCCAGATCGGAGTGCAGTGGCGCAGCCTCAGCTCACTGCAACCTCCACCTCCTGGGTTCGAGTGATTCTTATGCCTCAGCCTCCAAATTTGCTGGGATTATGACATGCACCACCATGCCCAGCTAATTGTTGTATTTTTAGTAGAGATGGGGTTTTTGCCATGTTGACCAGGCTGTTCCTCAACTCCTGGTCTCAAGTGATCTGCCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGCGTCAGCCACTGCCTCTGGCCTGTGTTCTTATATCTCATGTCCTTCAGTAGCACCCATCTGTGGCATCAGCAGCTCAGGTCTGGCTTGACTCTCTTCTCTTCTTGCCTCAGCAGGGAGGGCTCTGCCTCAACTCCCTCCAGGGTACAGCAGCAGCTGTAACAGCAGGGAGTTAAGGCAGAAACAAATAGAATATGCCTTAAAAAGCTGATTAAAGACAAAATGAAAGCTGGTAATAAAAAAAAAACAAAACTGGCCAAGGCTATTAAAATTGTTGAATTCACTATGAGTTATTATAAACTCTATAAAGAAGTAAATCTAGTGAGTTAGCCATTAAATAAATAGGCTTGAAACCACCTCCCTGGGCCTTGATCTATAAAATGAAAACATAATAGCATCAATCTCATAGGGAAGTTCTAAGAATTAGATCTTTGCACAATGCCTGGTACTTGGAAAATACGTTACTATTGCTATTCCTAGGACCATCAGGCACTATGATAGTTTGCTTCAATAACCTTCACAATACCTCAAGGATGTTAATTATTTTGCTCAAGATCACAAAGTTCCGACATAGATCAGACTCCAAAGCCCATAAAACACACACACACACGCGCGCGCGCACACACCTTTATTGCGATACGTAACACCAATAAAGTGCATGATGTTGCTCAGAGGCCTGCAGAAAAAAAGTGCATGAAACATACAGATTCATGAATAATTAGAATGCAAACATCCATGGAATCACCATTTGACTAAAAATAAAAACTCTGGCCGTCCTGTGTCTCTTCCACCTTCCATACCACACGCCCGTCTCTCTCGTCTTTGAGTTCACCACTAGCCTGACGCGTGGAAATCAGTTTCTAGCTTTTCCTTTGTGTCCCATGTGGAATCATACTGTTATTTTTGTCTGGCTTCTTTGGTCAACATTATGTTCTTAAGATTCATCTACGTAGCATAAATTAACTTTGTATACAAATACACAATTATTGCATTATTTCTTGCAGGGTCTGGAGCAACATCTATAGTCAAACATACTGATATTTCTACAGGAAGCATGGTCAATAAAAACTACGTGTAGCCTCATGTTCAGGTTTTGCCTCCAAATGAATTTTGTCTCAAACATGAATCTATGTTTGGGACTTCCTGACACCTGAGATATCAACAATCAGTATATTCCTCTTCTAGTGGACTTTTAAGAAACTTAATTCCTGAAAAAAAATTCAATATTTAAAACAAACAAGTTTCAAAAATGTTCAAACCACCCTTTCTCACCTTGCAAACTTACATATTCTTGTCTCCTGTCTCAGAGGATGTTTTCTTTTCCAAGGTCAACTGGTTCTTCAGGGCCTTCCGTCTCATTCATTCCCATCTTCTCTGGAGCCTTGGTACAAGCCATCATCCCCTCTCCCGTATCTTCAACATTTCCATTGGCCCTCCCGGTTTTTTTTTTAAAGCCCCCCCACCCAGTCCCTTGTGGTTATCCTTATTTCCTCTCCTTCCTTTCTAAGCAAGTTTTAAAAAATTTTGAGCCAGGGTCTTGATCTGTTGCCCAGGCTGGAGTGCACTGGCACCATCACTGCTCACTGCGGCCTCAAATTCCTGAGCTCAAGCAACCCTCCCACCTCAGCTTCCTAAAGGGCTGGGATTACAGGCATGAGCCACCGTGCCCAGCCACAAGCTTCTTAAGAGTAGCCCTCACTACTCCACTTTCTCACCTCCCACTTACTGAATTCATTAGCATTCTGCTTTCCCCTACCATGGTTCCTTTGAAATTGCCTGGCAAAGGACCATCATATTGCAAAATACTGTGGACACATCTCAATCACCTTTCTCACACTCTGCTGTATTTGGTACTGTTAACCATTCCCCTCCTTGAATCTTCTCTCCTGTGGATTTATTGTTGTTGTTCCTGTTTCCCAACTTTCTTGGAGTTTTATCTATTGCCTTGACCTCTCACTGGAGCTTCAGAATACATGTACATGGACAGATTTCCAAATCCAACTTTCCAGTAACTCGAGACACATCTAATTGTGCTCAAATTTCTTAGTCACCTCTCTTGGGCCTAGGCCTGTTCCTGCATTCTTTATCAGTGAATAGTTACTATCTACCAGATAATCTAACTAGAAACCCGGTAGTGATGCCATACTCTTACCCTGCCTCCAAATCCAAATTACGTGCCTGTAATTCCAACTACTCTGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAGGGTTGCAGCAAGCTGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAGGGCGAAACTCCGTCTCAAAAAAAAAAAGGCCGGGCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_195:HG2_PB_pbsv_281:HG3_Ill_Spiral_193:HG3_PB_pbsv_288:HG4_PB_pbsv_291:HG2_PB_PB10Xdip_1205:HG2_PB_PB10Xdip_1204:HG4_PB_HySA_401:HG3_PB_HySA_373:HG3_PB_assemblyticsfalcon_361:HG2_PB_assemblyticsPBcR_342:HG2_PB_assemblyticsfalcon_357:HG4_PB_SVrefine2Falcon1Dovetail_192:HG3_PB_SVrefine2Falcon1Dovetail_194:HG2_Ill_SVrefine2DISCOVARplusDovetail_170:HG3_PB_SVrefine2PBcRDovetail_175:HG4_Ill_SVrefine2DISCOVARDovetail_153:HG3_Ill_SVrefine2DISCOVARDovetail_161:HG2_PB_SVrefine2PBcRplusDovetail_195:HG2_PB_SVrefine2PB10Xhap12_249:HG4_PB_SVrefine2PBcRDovetail_158;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_249:HG2_PB_SVrefine2PBcRplusDovetail_195:HG3_Ill_SVrefine2DISCOVARDovetail_161:HG4_Ill_SVrefine2DISCOVARDovetail_153;NumExactMatchSVs=4;ClusterMaxShiftDist=0.13649;ClusterMaxSizeDiff=0.13649;ClusterMaxEditDist=0.217827;PBcalls=17;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=7472;DistBack=19158;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=266;REFWIDENED=1:23603557-23603822;PctSeqSimilarity=0.9975;PctSizeSimilarity=0.9999;PctRecOverlap=0.972;SizeDiff=-1;StartDistance=-209;EndDistance=-209;GTMatch=0;TruScore=98;MatchId=84.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:1:27:0:32:./.:0:5:0:6:1/1:0:29:1/1:0:674:.:7429:.
chr1	23821722	HG4_Ill_150bpfermikitraw_259	A	AGAGTAACAGGCTTAGGACAATTACGATGTGAGGAGTAATAGGCCTAGGACAATTACGATGTGAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_196:HG2_PB_pbsv_283:HG4_PB_pbsv_293:HG3_PB_HySA_377:HG2_Ill_breakscan11_2955:HG4_PB_HySA_407:HG4_Ill_svaba_288:HG4_Ill_manta_48:HG4_Ill_Krunchall_275:HG4_Ill_GATKHC_363:HG4_Ill_GATKHCSBGrefine_178:HG4_Ill_Cortex_41:HG4_Ill_250bpfermikitraw_282:HG4_Ill_150bpfermikitraw_259:HG3_PB_assemblyticsfalcon_363:HG3_Ill_svaba_283:HG3_Ill_manta_43:HG3_Ill_Spiral_194:HG3_Ill_Krunchall_258:HG3_Ill_GATKHC_364:HG3_Ill_GATKHCSBGrefine_154:HG3_Ill_Cortex_47:HG3_Ill_250bpfermikitraw_270:HG3_Ill_150bpfermikitraw_241:HG2_Ill_svaba_269:HG2_Ill_manta_44:HG2_Ill_SpiralSDKrefine_176:HG2_Ill_Krunchall_247:HG2_Ill_GATKHC_342:HG2_Ill_GATKHCSBGrefine_143:HG2_Ill_Cortex_70:HG2_Ill_250bpfermikitraw_273:HG2_Ill_150bpfermikitraw_232:HG2_PB_PB10Xdip_1211:HG2_PB_PB10Xdip_1210:HG2_PB_HySA_497:HG3_PB_pbsv_290:HG2_PB_SVrefine2Falcon1plusDovetail_197:HG4_PB_SVrefine2PBcRDovetail_160:HG4_Ill_SVrefine2DISCOVARDovetail_155:HG3_PB_SVrefine2PBcRDovetail_177:HG3_Ill_SVrefine2DISCOVARDovetail_163:HG2_PB_SVrefine2PBcRplusDovetail_197:HG2_PB_SVrefine2PB10Xhap12_251:HG2_Ill_SVrefine2DISCOVARplusDovetail_171;NumClusterSVs=45;ExactMatchIDs=HG2_Ill_150bpfermikitraw_232:HG2_Ill_250bpfermikitraw_273:HG2_Ill_Cortex_70:HG2_Ill_GATKHCSBGrefine_143:HG2_Ill_GATKHC_342:HG2_Ill_Krunchall_247:HG2_Ill_SpiralSDKrefine_176:HG2_Ill_manta_44:HG2_Ill_svaba_269:HG3_Ill_150bpfermikitraw_241:HG3_Ill_250bpfermikitraw_270:HG3_Ill_Cortex_47:HG3_Ill_GATKHCSBGrefine_154:HG3_Ill_GATKHC_364:HG3_Ill_Krunchall_258:HG3_Ill_Spiral_194:HG3_Ill_manta_43:HG3_Ill_svaba_283:HG3_PB_assemblyticsfalcon_363:HG4_Ill_150bpfermikitraw_259:HG4_Ill_250bpfermikitraw_282:HG4_Ill_Cortex_41:HG4_Ill_GATKHCSBGrefine_178:HG4_Ill_GATKHC_363:HG4_Ill_Krunchall_275:HG4_Ill_manta_48:HG4_Ill_svaba_288;NumExactMatchSVs=27;ClusterMaxShiftDist=0.119403;ClusterMaxSizeDiff=0.0895522;ClusterMaxEditDist=0.323529;PBcalls=14;Illcalls=30;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=64;DistBack=-1;DistForward=20;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=30;REFWIDENED=1:23821715-23821744;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=85.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:1:26:0:14:1/1:1:22:1:26:1/1:0:47:./.:.:.:.:.:.
chr1	23981127	HG2_PB_SVrefine2Falcon1plusDovetail_199	C	CAACAGATGGGGCATCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGACTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_284:HG3_PB_pbsv_291:HG2_PB_assemblyticsfalcon_362:HG3_PB_assemblyticsfalcon_364:HG2_PB_HySA_499:HG3_PB_SVrefine2Falcon1Dovetail_196:HG3_PB_SVrefine2PBcRDovetail_178:HG3_Ill_GATKHCSBGrefine_155:HG2_PB_SVrefine2Falcon1plusDovetail_199:HG2_Ill_MetaSV_51:HG2_Ill_breakscan11_2956;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_MetaSV_51:HG2_PB_SVrefine2Falcon1plusDovetail_199:HG3_Ill_GATKHCSBGrefine_155:HG3_PB_SVrefine2PBcRDovetail_178;NumExactMatchSVs=4;ClusterMaxShiftDist=0.245499;ClusterMaxSizeDiff=0.245499;ClusterMaxEditDist=0.288052;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=330;DistBack=-1;DistForward=9425;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:23981128-23981142;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=86.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:29:1|0:5:25:18:1:./.:13:0:0:4:0/1:17:20:0/1:11:29:.:.:.
chr1	24210835	HG2_Ill_SVrefine2DISCOVARplusDovetail_176	T	TTAGAGGCGTGAGCCACTACACCTGGCTATGTATACTTTAGTGATTATTTTTCCTCAAAACATTAAATATTAAAACACTAAAGTAGTTACAATTGAAAAATTGAAAGTTAAGTGTATTAAAACTTAAAATATTACTTTACTATTATTATTTAAAATAGAGGCCGGATATGGTAGCTCACACCTATAATCCCAGCACTTTGGGAGGCCAACGCTGGCAGATCACTTGAGGTCAGGAGTTTGAGATCAGCCTGGCCAACATGGTGAAACCCAGTCTCTACTAAAAGTACAAAAAAAGAAAAAACAATTAGCTGAGAATGGTGGCTCATGTCCGTATTCCCAGCTATTCCAGAGTCTGAGGCACGAGAATCACTGGAATGTGGAAGGGGGAGGTTGCAGTGAGCCAAGATCGAGCCACTGCACTCCAGCCTGGGCGACAAAAACTGTCTCAAAAACAAACAAACAAACAAACAAAAAACTGACATTTAAAATAGAGACAGGGTCTTGCTTGTTTGTTGCCCAGAAGGCTGGCCTCAAGCAGTCCTCCCTCCTCAGTCTCTGAAATTGCTAGTATTACAGGCATGAGCCACCATGCCTGGCCCACAGTATTATTTTATAAAGTATAAAGATATACGTATTTTTAAAACTTCTTTTAAAATAAAAAGAATATATATACAAATAGATTTTTTCTTTTGAAGACAGGGTGTGGCTGTCGCCTAGGCTGGAGTCCAGTGGTGCAATCATAGCTCACTGCAGCCTCGAACTCCTGGCCTCAAGTGATCCTCCTTCCTCGCCATCCCAAAGCTCTGGGATTACAAGTATGAACCACTTGCACCTGGTCTGATCTAGTTTTTTAAGCATGAGAACTGGGCTGTGCTGTAAATGTGGCTTCTCTGAATTGAGATGGGCTATAGGTAGAAAATACACACTGAATTTCAAAGGTTACGTGAGCAGAAGAATATAAAATATCTCAATTTTTTATATCGATGACAAGTTGAGATGACAATATTTTGGAATATATTGGGTTAAATAAAAATTTGTTTCACCAGTTTCTTTTTATTTTTATTTTATTTTTTTGAGATGGAGTCTCGCTCTTGTTGGCCAGGCTGGAGTACAGTGGCACTATCTCGGCTCACTGTAACCTCCGCCTCCTGGGTTTAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTGCAGGCATATACCACCATGCCCGGCTAATTTTTGTATTTTTAGTACAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGGACTCTTGACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGGGTGAGCCACCATGCCCAGCCTATTTTAAAATGTTTAGATGTGTCTATGGAAAATTTTATTTTATTTTATTTTATTTATTTATTTATTTTTGAGACAGAGTCTCGCTCTGTCACCCGGGCTGGAGTGCAGTGGCCTGATCTCAGCTCACTACAAGCTCTGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACATGTGCCCGCCACCACGCCCGGCTAATTTTTTGTTTGTTTGTTTGTATTTTTAGTAGAGACAGGGTTTCACTGTGTTAGCCAGGATAGTCTTGATCTCCTGACCTCGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGCACCGGCTGGAAAATTTTTAAATCATCCACGTGTCTCATAGTTTTGCGGGACATCTGTAGACCCCAGGAGAGCTGCCTGCTGATCAGAACTCATTCCCCAGCCTGGCTCAGCTGGATGCCTCACAGTTCCCAAACAGTCCTGTTTTCTTGCCTCCACGCCTTTGCACCAGGGGTCCTTTCCCTGGCGCACTTCCCTCCTGACCTTTCCTCTGGGCTCATCTCCTGCCCAGTGAAGCCTTCCCTGATCCTGCAGTCACATCTGAAGCACCCGGCCCGCTCTGCGTGTGTGGTAACTGGTGCTGCACTGGTCTTTCCCCTCGACTAGATCACTAACCACGCTGACCAACATTTGAATGGAATTTAAATTCCACAAAATATTTTTCACAGCCACCATCTAGTTTTGTTGTTGTTGTTGTTTTGAGATAGGGTCTCCCTCTGTCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_1355:HG4_PB_pbsv_297:HG4_PB_HySA_410:HG2_PB_HySA_505:HG3_PB_SVrefine2Falcon1Dovetail_198:HG4_PB_SVrefine2PBcRDovetail_162:HG4_Ill_SVrefine2DISCOVARDovetail_160:HG3_Ill_SVrefine2DISCOVARDovetail_167:HG2_PB_SVrefine2PBcRplusDovetail_199:HG2_PB_SVrefine2PB10Xhap12_254:HG2_Ill_SVrefine2DISCOVARplusDovetail_176:HG2_10X_SVrefine210Xhap12_202:HG3_PB_SVrefine2PBcRDovetail_179:HG2_PB_SVrefine2Falcon1plusDovetail_201:HG4_PB_SVrefine2Falcon1Dovetail_195:HG2_PB_PB10Xdip_1356;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_202:HG2_Ill_SVrefine2DISCOVARplusDovetail_176:HG2_PB_SVrefine2PB10Xhap12_254:HG2_PB_SVrefine2PBcRplusDovetail_199:HG3_Ill_SVrefine2DISCOVARDovetail_167:HG4_Ill_SVrefine2DISCOVARDovetail_160:HG4_PB_SVrefine2PBcRDovetail_162;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0382488;ClusterMaxSizeDiff=0.0368664;ClusterMaxEditDist=0.0824885;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=2151;DistBack=46433;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:24210836-24210836;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=87.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:1/1:0:14:0:26:1/1:0:12:0:25:1/1:0:51:1/1:14:343:.:.:.
chr1	24775163	HG2_PB_SVrefine2PBcRplusDovetail_205	C	CAAGAATGTAACTAGAGTGCTCGCTTCGGCAGCACATATACTAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCAAATTCGTGAAGCGTTCCATATTTTTTCCTCAACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCTTATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_527:HG2_PB_pbsv_293:HG3_PB_pbsv_299:HG2_PB_PB10Xdip_1463:HG4_PB_pbsv_303:HG3_PB_assemblyticsfalcon_375:HG4_PB_HySA_422:HG2_Ill_breakscan11_2957:HG2_PB_SVrefine2Falcon1plusDovetail_205:HG2_PB_SVrefine2PB10Xhap12_260:HG4_PB_SVrefine2PBcRDovetail_167:HG4_PB_SVrefine2Falcon1Dovetail_201:HG3_PB_SVrefine2PBcRDovetail_184:HG2_PB_SVrefine2PBcRplusDovetail_205:HG3_PB_SVrefine2Falcon1Dovetail_203;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_205:HG3_PB_SVrefine2PBcRDovetail_184;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0565657;ClusterMaxSizeDiff=0.0565657;ClusterMaxEditDist=0.205187;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=2911;DistBack=5853;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:24775164-24775178;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9997;PctRecOverlap=0.9993;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=88.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:43:./.:20:8:4:19:0|1:36:0:0:7:0/1:28:7:0/1:98:334:.:2938:.
chr1	25056805	HG3_PB_SVrefine2PBcRDovetail_186	A	AGGAGGGGAGGGGGAGGGGGGGGAGGGGGAGGGGGAAGGGGAGGGGGGAGGAGGGGAGGAGGGGAGGGGGAGGGGGAAGGAGAGGAGGGGAGGGGGAAGGGGGGAGGAGGGGAGGGGGAGGGGGAAGGGGAGGAGGGGAGGGGGAAGGGGAGGAGGGGGAGGGGAGGAGGGAGGGGGAAGGGGAGGAGGGGAGGGGGAAGGGGAGGAGGGGGAGGGAGGAGGGGAGGGGAGGAGGGGAGGGGAAGGGGAGGAGGGGAGGGGAAGGGAGGGGGAGGGGAGGGGGAGGGGAGGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_207:HG2_PB_pbsv_296:HG3_PB_SVrefine2PBcRDovetail_186:HG2_PB_SVrefine2PBcRplusDovetail_208:HG2_PB_PB10Xdip_1628:HG2_PB_PB10Xdip_1627:HG2_PB_SVrefine2PB10Xhap12_263:HG4_PB_pbsv_306:HG2_PB_SVrefine2Falcon1plusDovetail_208:HG4_PB_SVrefine2Falcon1Dovetail_204:HG4_PB_SVrefine2PBcRDovetail_170;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_186;NumExactMatchSVs=1;ClusterMaxShiftDist=0.162963;ClusterMaxSizeDiff=0.162963;ClusterMaxEditDist=0.230496;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=291;DistBack=16;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=1:25056806-25056871;PctSeqSimilarity=0.9638;PctSizeSimilarity=0.9966;PctRecOverlap=0.8625;SizeDiff=1;StartDistance=-40;EndDistance=-40;GTMatch=0;TruScore=94;MatchId=89.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:./.:0:7:0:4:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr1	25380756	HG2_PB_SVrefine2PBcRplusDovetail_212	T	TCTTCCTTCCTTCCTTCCTCTCTCCCTCCCTCCCTCCCTTACTTCCTCCCTCCCTCCCTCCCTCCCTTCCCTTTCCTCCCCTCCCCCTCTCCTTCCTTTTTTCCTTCCTCTCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCTTTCCCTTTCCTCCCCTTCCCTCCCCCCTCCTCCTTTCTCCTTCCTTCCTTCCTCCATCCTTCCCTTCCTCTCTTCCCTTTCCTCCCCTCCTCTCCCCCTCTCCTCCCTTCTC	20	PASS	ClusterIDs=HG4_PB_pbsv_311:HG3_PB_SVrefine2Falcon1Dovetail_211:HG2_PB_HySA_541:HG4_PB_HySA_425:HG3_PB_pbsv_307:HG2_PB_SVrefine2Falcon1plusDovetail_213:HG2_PB_pbsv_301:HG4_PB_SVrefine2Falcon1Dovetail_207:HG3_PB_SVrefine2PBcRDovetail_190:HG4_PB_SVrefine2PBcRDovetail_175:HG2_PB_SVrefine2PBcRplusDovetail_212:HG2_PB_SVrefine2PB10Xhap12_268:HG3_Ill_SVrefine2DISCOVARDovetail_174:HG2_10X_SVrefine210Xhap12_209:HG3_PB_HySA_399;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_268:HG2_PB_SVrefine2PBcRplusDovetail_212:HG4_PB_SVrefine2PBcRDovetail_175;NumExactMatchSVs=3;ClusterMaxShiftDist=0.192053;ClusterMaxSizeDiff=0.178808;ClusterMaxEditDist=0.291391;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=299;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=223;REFWIDENED=1:25380757-25380979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=90.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:1:27:3:30:1/1:1:33:0:33:1/1:0:22:1/1:1:25:.:.:.
chr1	25435363	HG3_PB_assemblyticsfalcon_386	A	AAAGATGGAAGGAAGGACGGAAGGAAGGATGGAAGGGCGGGAGGGAGGGAGAGAGGGAGGGAGAGAGGG	20	PASS	ClusterIDs=HG4_PB_HySA_427:HG2_PB_PB10Xdip_1638:HG3_Ill_GATKHCSBGrefine_160:HG2_Ill_GATKHCSBGrefine_151:HG2_PB_PB10Xdip_1637:HG4_Ill_svaba_302:HG4_Ill_Krunchall_290:HG4_Ill_GATKHCSBGrefine_185:HG4_Ill_250bpfermikitraw_296:HG3_PB_assemblyticsfalcon_386:HG3_Ill_svaba_297:HG3_Ill_Spiral_205:HG3_Ill_250bpfermikitraw_282:HG2_Ill_svaba_282:HG2_Ill_Krunchall_262:HG2_Ill_250bpfermikitraw_290:HG4_PB_pbsv_312:HG3_PB_HySA_402:HG2_PB_HySA_542;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_290:HG2_Ill_Krunchall_262:HG2_Ill_svaba_282:HG3_Ill_250bpfermikitraw_282:HG3_Ill_Spiral_205:HG3_Ill_svaba_297:HG3_PB_assemblyticsfalcon_386:HG4_Ill_250bpfermikitraw_296:HG4_Ill_GATKHCSBGrefine_185:HG4_Ill_Krunchall_290:HG4_Ill_svaba_302;NumExactMatchSVs=11;ClusterMaxShiftDist=0.206349;ClusterMaxSizeDiff=0.204724;ClusterMaxEditDist=0.285714;PBcalls=7;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=68;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:25435362-25435365;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=91.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:33:1:27:./.:2:12:0:18:1/1:1:32:./.:.:.:.:.:.
chr1	25855990	HG2_Ill_GATKHCSBGrefine_153	A	ATGTTTGTATTGTGTGTATGAGGGTTGTGTGCTGTGTGTTGTGTATATATTGTATGTGTTATGTGTATGTATGTCGTATGAGTGTATTCTGTATATGTGTTTTGTGTGGTCTATTATGTATGTGGCATGTGTTGTGTATGTGTGTTGTGTGTGATGTGTTGTATGTGTGTTGTGCATATATGTTGTTTCTGTGTATGTATGTTATGTGTATGTGTATGTTGTGTTGTATGTATGGGTTGTGCCTATGTGCTGTGTTGTGTGCTGCATGCATGTTTGTGTGGTGTGTGTATTTAGGTTGTGTGCTATTTATGTGTCTATATTGTATGTGTTGTATGTGTGTTGTATGTATGTGTAGTGTATGTGTGTTGTGTGTGATGTGTATATGTGGTGTGTGTATGTCTGTTATGTGTATGTATGAGTGTATGTGTGTTGTGTGTGTTGTGTATATGTGTTGTGTGTGTTGTGTATGTGTGTTGTGAGTTGTGTATATGTGGTGTGAGTTGTGTTGTGTCATGTATGTGTGCATTGTGTATAGGTGTTGCATGTGTGTTGTGTTGTGTGTATGTGTTGTGTTGTGTATATGTGGTATGTGAATGTGTATGTTGTATGTTGTGTTGTATGTATATGTGTTATGTATATGTGATGTGTGTGTTGTGTATATGCTGGGTGTGTGTGTACATGTGTGTATGTGTGTTGTATGTATGTGTGTATGCATGTGTGTTGCGTATATGTGGTATGTGTGCATGTGTGTTGTCATGTGTATGTGTGTTGTGTATATGTGTGTGTTGTGTATATGTGTTGTGTGTATGTGTATCATGTTGTGTGTATGTGTTATGTTGTGTATATGTGGTGTGTGAATGTGTGTTGTGTGTATGTGTATGTTGTCTGTTTTGTGTGTGTATACGTGGTGTGTGTGTGTTGTGTTGTGTATATGTGTTGTGTGTGTTGCGTGTATGTGTTGTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_212:HG2_PB_PB10Xdip_1882:HG2_PB_PB10Xdip_1881:HG4_PB_HySA_429:HG4_Ill_MetaSV_60:HG4_Ill_GATKHCSBGrefine_187:HG4_Ill_manta_51:HG3_Ill_MetaSV_65:HG3_Ill_GATKHCSBGrefine_162:HG2_Ill_manta_47:HG2_Ill_SVrefine2DISCOVARplusDovetail_184:HG2_Ill_MetaSV_56:HG2_Ill_GATKHCSBGrefine_153:HG3_PB_pbsv_311:HG4_PB_pbsv_316:HG3_PB_SVrefine2PBcRDovetail_191:HG3_Ill_SVrefine2DISCOVARDovetail_176:HG2_PB_SVrefine2PBcRplusDovetail_214:HG2_Ill_SVrefine2DISCOVARplusDovetail_183:HG4_Ill_SVrefine2DISCOVARDovetail_161;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_153:HG2_Ill_MetaSV_56:HG2_Ill_SVrefine2DISCOVARplusDovetail_184:HG2_Ill_manta_47:HG3_Ill_GATKHCSBGrefine_162:HG3_Ill_MetaSV_65;NumExactMatchSVs=6;ClusterMaxShiftDist=0.048855;ClusterMaxSizeDiff=0.0437214;ClusterMaxEditDist=0.196215;PBcalls=8;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=962;DistBack=3;DistForward=74357;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=278;REFWIDENED=1:25855729-25856006;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=93.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:1/1:0:5:1:4:1/1:4:112:2:127:1/1:0:28:1/1:7:188:.:1044:.
chr1	26077749	HG3_Ill_250bpfermikitraw_286	C	CTTTTCTCCTTCCATCCATCCTTCCATCATTCTCCTTCCATCCACCTTTTCTTCTGTCT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_294:HG3_PB_HySA_407:HG4_PB_HySA_430:HG2_PB_HySA_551:HG2_PB_PB10Xdip_1883:HG3_PB_pbsv_312:HG4_PB_assemblyticsfalcon_379:HG4_PB_pbsv_317:HG4_Ill_Krunchall_294:HG2_PB_pbsv_307:HG4_Ill_GATKHC_389:HG4_Ill_GATKHCSBGrefine_188:HG4_Ill_250bpfermikitraw_300:HG4_Ill_150bpfermikitraw_277:HG3_Ill_GATKHC_388:HG3_Ill_250bpfermikitraw_286:HG2_Ill_Krunchall_268:HG2_Ill_GATKHC_363;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_294:HG4_PB_assemblyticsfalcon_379:HG4_Ill_Krunchall_294:HG4_Ill_GATKHC_389:HG4_Ill_GATKHCSBGrefine_188:HG4_Ill_250bpfermikitraw_300:HG4_Ill_150bpfermikitraw_277:HG3_Ill_GATKHC_388:HG3_Ill_250bpfermikitraw_286:HG2_Ill_Krunchall_268:HG2_Ill_GATKHC_363;NumExactMatchSVs=11;ClusterMaxShiftDist=0.216667;ClusterMaxSizeDiff=0.2;ClusterMaxEditDist=0.333333;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=245;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=98;REFWIDENED=1:26077748-26077848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=94.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:29:0|1:27:3:0:24:./.:5:4:9:0:0/1:29:14:./.:.:.:.:.:.
chr1	26532972	HG2_Ill_Krunchall_273	A	AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_252:HG4_PB_pbsv_320:HG2_PB_pbsv_310:HG4_Ill_GATKHC_391:HG4_Ill_GATKHCSBGrefine_191:HG4_Ill_250bpfermikitraw_302:HG4_Ill_150bpfermikitraw_280:HG2_Ill_Krunchall_273:HG2_Ill_GATKHC_366:HG2_Ill_GATKHCSBGrefine_156;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_252:HG4_Ill_GATKHC_391:HG4_Ill_GATKHCSBGrefine_191:HG4_Ill_250bpfermikitraw_302:HG4_Ill_150bpfermikitraw_280:HG2_Ill_Krunchall_273:HG2_Ill_GATKHC_366:HG2_Ill_GATKHCSBGrefine_156;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0944882;ClusterMaxSizeDiff=0.0787402;ClusterMaxEditDist=0.170543;PBcalls=2;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=-1;DistForward=25;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=1:26532973-26533012;PctSeqSimilarity=0.9919;PctSizeSimilarity=0.9836;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=95.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:19:./.:22:14:9:2:./.:1:7:6:1:0/1:26:13:./.:.:.:.:.:.
chr1	27356977	HG2_PB_SVrefine2PBcRplusDovetail_219	G	GGCTAATTTTGTATATTTAGTAGAGATGGGGTTTCACCATGTTGGGCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTACCTGTCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCTGGCCTTATACACTACTAATTTTGAAGAAAAAAAAAATCAATGTCCTAACTGAAAGTAAGAAAATAAAAGTAAAATAAGGCCAGGAGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACAAGGTCAGGAGTTTGAGACCAGCCTAACCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCCTGGTGGTGCGTGCCTGTAATCCCAGCTACTCTGGAGGCTGAAGCAGGAGAATCGCTTGAATCTGGGAGATGGAGGTTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGTGACAGACTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGAAAAGAGAAGAAAAAGAATCTATAATGTCTCTCTCTTTTTTTATTTTTTATTTTACTTTATTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCACCTCCAGGGCTCAAGCGATTCTCCTGCTTCAGCCTCCAGAGTAGCTGGGATTACAGGCACGCACCACCACACCCA	20	PASS	ClusterIDs=HG3_PB_HySA_417:HG2_PB_pbsv_314:HG4_PB_pbsv_325:HG3_PB_pbsv_318:HG4_PB_HySA_439:HG2_PB_PB10Xdip_2007:HG2_PB_PB10Xdip_2006:HG2_PB_HySA_567:HG4_Ill_MetaSV_64:HG4_PB_SVrefine2PBcRDovetail_181:HG3_PB_SVrefine2Falcon1Dovetail_215:HG2_PB_SVrefine2Falcon1plusDovetail_217:HG4_PB_SVrefine2Falcon1Dovetail_212:HG2_PB_SVrefine2PBcRplusDovetail_219:HG2_PB_SVrefine2PB10Xhap12_275;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_275:HG2_PB_SVrefine2PBcRplusDovetail_219:HG4_PB_SVrefine2Falcon1Dovetail_212;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0606878;ClusterMaxSizeDiff=0.0579906;ClusterMaxEditDist=0.177015;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=720;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=120;REFWIDENED=1:27356978-27357097;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9986;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=96.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:19:0:18:1/1:0:6:0:8:1/1:0:23:./.:6:97:.:.:.
chr1	27412986	HG2_PB_PB10Xdip_2008	C	CATACACCACACAACCCACACACCACACCACCACACACACACACCACACACACCATTTCACCACACAACCCACACACCACACCACCACACACACACCACACACACCAAACCACACCCACATCACACACCCCACACACACACCACACATATGCCACACCACACACACACGCCACACCACACACATGCCACACCTCACACCTCCCCACACAAATCACACACACCACACACCACACACACACCCCACATGACACACACACTACACACACCACACACACCACACTCCACACACACCATTTCACCACACAACCCACACACCACACCACCACACACACACCACACACACCCTAGACACCACACAAACCACACACACCACACCCACACCACACACCCCACACCACACCCCACATACCACCATACACACCACACATACCACCATACACACCAAACACCACAGACACCACACATACACCACACAGACCCCACTCACCACACACACCACATACACGACACATACTACACACCCCACATACCACAAACACCACACAAGCAACAAACCATACACACCATGCACACACCACACACGACACATACTACACACCCCGCATACCACAAACACCACACAAGCAACACACAAACCATACACACCATGCACACACCACACATGACACACATGCCCCACACACAGCATATACACCACACACAACACACACACACCGCACAAACACACACCCCACTACACACCCTACACACACACCATGCACACCATACACACCACACACACACACCACACATATCACACACCCCCACGCACCACACCACACAGCACACACACACCATACACACACAACACACCACACACATACAACATACACACCACACCACACACACCACACGCCCCCACATGCCACACCACATACACATCATACACACCAAACACCACACACGCAGTACACACCACACACCATACAGCCCACACCACACACACAACACACAAACCACACACACACCATATACACCAAACACCACACACACAACACATGCAACACACACACTATATACACCACCATGCACAAATCACACACCACACACCCCACATACCACACACACCACATACACCACACACTACACACACACAACCACATGCCACACACACACTCCCCCGACA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_2008:HG2_PB_HySA_568:HG2_PB_pbsv_315:HG4_PB_SVrefine2Falcon1Dovetail_213:HG2_PB_SVrefine2Falcon1plusDovetail_218:HG2_PB_SVrefine2PBcRplusDovetail_220:HG2_PB_SVrefine2PB10Xhap12_276:HG3_PB_SVrefine2PBcRDovetail_194:HG3_Ill_SVrefine2DISCOVARDovetail_181:HG4_Ill_SVrefine2DISCOVARDovetail_167:HG4_PB_SVrefine2PBcRDovetail_182:HG2_Ill_SVrefine2DISCOVARplusDovetail_191:HG3_PB_SVrefine2Falcon1Dovetail_216:HG2_Ill_breakscan11_2960:HG2_PB_PB10Xdip_2009;NumClusterSVs=15;ExactMatchIDs=HG2_PB_PB10Xdip_2008:HG2_PB_PB10Xdip_2009;NumExactMatchSVs=2;ClusterMaxShiftDist=0.122905;ClusterMaxSizeDiff=0.122905;ClusterMaxEditDist=0.175333;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=1164;DistBack=5389;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:27412987-27412986;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9991;PctRecOverlap=0.9983;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=97.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:59:1/1:1:31:4:28:./.:15:146:7:114:1/1:0:9:1/1:7:209:.:2577:.
chr1	27433707	HG3_PB_pbsv_320	C	CACCTCTACACACACCCCCACACACCAACCAGCCCCTCCACACACACACCCACACCCACACAACCAGCCCCTCCACCACACACACACCCACGCCCCTACACACACCACACACCCAGCCCTCCACACAACACACCCACCCCCTACAACACACACCACACACCCAGCCCCTAACACACACCACACAACACCCAGCCCTACACACACCCACCACACCCAAGCCCGTACACCAACACACACCCAGCCCCCCACACCCACACACCCACCACACCAGCCCCTACACACAACACACACACCCAGCCCCTACACACACCCACACACCCAGCCCTATACACCACACACCCAGCCCTCCCACCACAACACCCACACACACACCCAGCCCTACAACCACCCCCACACCCCCCAACACACCACCCAGCCCTCCACACACACCCACCACACCAAGCCCCTCACACACACCACATATCCCAGCCCCTCCACACAACACAACCCAGACCCCCACACACACACCCAGCCCCATACACACCAGCCTCTACACACACACACACCCAGACCCCTCCACACAACCCACACACATCCAGCCCCAATCCACACGCACAACACACCCCAGCCCTCCACACACACACACACCCAGCCCATCCCAACACCACATACCACAGCCCCTACACACACACCAGCTCCTCCCACACACACACACAGCCCCTCCCAGGACACCATCCAGCCCCTCCCACACACACAAAGCACCTCCTCCCACCCCAACACAGGCCCTCCACTACACACACCCAAGCCCTTTCCACACACACCCAGCCCCTCCACACAACACACACACCCATATCTCCACACATACACACACAGCCCCTCACACACCAAACCCATCTCCATTACACACACACACACCCAGCCCCTCCCACTCCCAGCCCCTCCACCACATTACACACACACCCTCCACACACAAAAACCCATCTCCAATACACACACACACACCCAAGCCCCTCCCACCCCAGACCCTCACACACACAACACCCAGGCCCCTCCCACTCCAGCCCCTCACCACACACACACACCAGCCCCTTCACACCACACACCCAAGGCCCCTCCCACTCCCAGCCCCTCCACACCACACACACCCAGCCCCCATTCACACACACACCCAGCCCCTACCACAACACACATTTCAAGCCCCTACACACCATACCACACACACACAAGCCCTTTCACCCACAATACACTACAACACCACACCCAAGCAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_277:HG2_PB_pbsv_317:HG2_PB_PB10Xdip_2010:HG2_PB_PB10Xdip_2011:HG2_PB_HySA_571:HG3_PB_pbsv_320:HG4_PB_pbsv_326:HG2_PB_HySA_570:HG4_PB_SVrefine2PBcRDovetail_183:HG4_PB_SVrefine2Falcon1Dovetail_214:HG3_PB_SVrefine2Falcon1Dovetail_217:HG2_PB_SVrefine2PB10Xhap12_278:HG2_PB_SVrefine2Falcon1plusDovetail_219:HG2_PB_SVrefine2PBcRplusDovetail_221:HG3_PB_assemblyticsfalcon_401:HG4_PB_assemblyticsfalcon_394;NumClusterSVs=16;ExactMatchIDs=HG3_PB_pbsv_320;NumExactMatchSVs=1;ClusterMaxShiftDist=0.342152;ClusterMaxSizeDiff=0.342152;ClusterMaxEditDist=0.383525;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1246;DistBack=0;DistForward=3;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:27433708-27433707;PctSeqSimilarity=0.9515;PctSizeSimilarity=0.9607;PctRecOverlap=0.9599;SizeDiff=49;StartDistance=-4;EndDistance=-4;GTMatch=1;TruScore=95;MatchId=98.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:63:1/1:1:30:2:24:./.:420:217:331:167:0/1:6:3:0/1:25:109:.:2577:.
chr1	28573642	HG3_Ill_SVrefine2DISCOVARDovetail_188	A	AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_223:HG4_PB_assemblyticsfalcon_400:HG2_PB_pbsv_323:HG2_Ill_GATKHCSBGrefine_164:HG4_PB_SVrefine2Falcon1Dovetail_219:HG4_Ill_GATKHCSBGrefine_198:HG3_Ill_Spiral_223:HG3_Ill_SVrefine2DISCOVARDovetail_188:HG3_Ill_GATKHCSBGrefine_169;NumClusterSVs=9;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_169:HG3_Ill_SVrefine2DISCOVARDovetail_188:HG3_Ill_Spiral_223;NumExactMatchSVs=3;ClusterMaxShiftDist=0.110345;ClusterMaxSizeDiff=0.110345;ClusterMaxEditDist=0.236934;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=152;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=1:28573638-28573669;PctSeqSimilarity=0.98;PctSizeSimilarity=0.9605;PctRecOverlap=0.9608;SizeDiff=6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:16:0|1:21:0:0:19:0|1:13:0:0:5:0/1:22:11:./.:.:.:.:.:.
chr1	28736599	HG2_Ill_SVrefine2DISCOVARplusDovetail_204	T	TCCCGAGTAGCTGGGACTACAGGCACGTGCCACCACACCCAGCTCATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATCTTGGCCAGGATGATCTCGAGCTCCTGACCTCATGATCTGCCCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_225:HG3_PB_pbsv_327:HG2_PB_HySA_582:HG4_PB_HySA_447:HG4_PB_SVrefine2Falcon1Dovetail_221:HG4_PB_pbsv_334:HG4_Ill_SVrefine2DISCOVARDovetail_175:HG3_Ill_SVrefine2DISCOVARDovetail_189:HG2_Ill_SVrefine2DISCOVARplusDovetail_204:HG2_10X_SVrefine210Xhap12_228;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_228:HG2_Ill_SVrefine2DISCOVARplusDovetail_204:HG3_Ill_SVrefine2DISCOVARDovetail_189:HG4_Ill_SVrefine2DISCOVARDovetail_175;NumExactMatchSVs=4;ClusterMaxShiftDist=0.202335;ClusterMaxSizeDiff=0.194553;ClusterMaxEditDist=0.318519;PBcalls=6;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=125;DistBack=11;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=127;REFWIDENED=1:28736600-28736726;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:20:1|0:3:17:27:0:./.:1:18:3:0:0/1:14:12:./.:.:.:.:.:.
chr1	29321462	HG2_Ill_breakscan11_2961	G	CACCCAGCCTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGAGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2961:HG2_PB_pbsv_325:HG4_PB_pbsv_337:HG4_PB_HySA_454;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_breakscan11_2961;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.185976;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=-1;DistForward=21151;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:29321463-29321461;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=102.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:24:0|1:37:3:0:10:1|0:0:9:35:0:0/1:26:10:0/1:9:34:.:.:.
chr1	29426842	HG4_PB_assemblyticsfalcon_403	C	CGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGCTGGG	10	PASS	ClusterIDs=HG4_PB_pbsv_339:HG4_PB_assemblyticsfalcon_403:HG2_PB_pbsv_327:HG2_PB_HySA_589:HG3_PB_pbsv_328:HG3_PB_HySA_426:HG4_PB_HySA_455:HG2_PB_SVrefine2Falcon1plusDovetail_227:HG3_PB_SVrefine2PBcRDovetail_199:HG3_PB_SVrefine2Falcon1Dovetail_225:HG4_PB_SVrefine2Falcon1Dovetail_222;NumClusterSVs=11;ExactMatchIDs=HG4_PB_assemblyticsfalcon_403;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0997067;ClusterMaxSizeDiff=0.0997067;ClusterMaxEditDist=0.236842;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=327;DistBack=1;DistForward=2;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:29426843-29426842;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9939;PctRecOverlap=0.9453;SizeDiff=-2;StartDistance=17;EndDistance=17;GTMatch=0;TruScore=97;MatchId=103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:17:0|1:26:0:1:18:./.:20:0:0:4:0/1:42:13:0/1:7:35:.:.:.
chr1	29845252	HG4_Ill_150bpfermikitraw_295	C	CTCCTCCTTCTCCTCCTCCTCCTCCTCCTTCTCCTCCTTCTCCTTCTTCTCCT	20	PASS	ClusterIDs=HG3_PB_pbsv_330:HG2_Ill_FB_203:HG3_Ill_Spiral_227:HG2_PB_PB10Xdip_2021:HG2_PB_PB10Xdip_2020:HG2_Ill_breakscan11_2963:HG2_PB_HySA_591:HG4_PB_assemblyticsfalcon_404:HG4_Ill_svaba_320:HG4_Ill_scalpel_205:HG4_Ill_manta_55:HG4_Ill_Krunchall_312:HG4_Ill_GATKHC_413:HG4_Ill_GATKHCSBGrefine_199:HG4_Ill_250bpfermikitraw_316:HG4_Ill_150bpfermikitraw_295:HG3_Ill_svaba_320:HG3_Ill_scalpel_242:HG3_Ill_Krunchall_296:HG3_Ill_GATKHC_416:HG3_Ill_GATKHCSBGrefine_170:HG3_Ill_250bpfermikitraw_303:HG2_Ill_svaba_304:HG2_Ill_scalpel_226:HG2_Ill_Krunchall_292:HG2_Ill_GATKHC_388:HG2_Ill_GATKHCSBGrefine_165:HG2_Ill_250bpfermikitraw_309:HG2_Ill_150bpfermikitraw_265:HG3_Ill_FB_203:HG4_Ill_svaba_319:HG3_Ill_svaba_319:HG3_Ill_scalpel_241:HG3_Ill_Krunchall_295:HG3_Ill_250bpfermikitraw_302:HG2_Ill_svaba_303:HG3_PB_HySA_429:HG4_PB_HySA_456:HG4_PB_pbsv_340;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_265:HG2_Ill_250bpfermikitraw_309:HG2_Ill_FB_203:HG4_PB_assemblyticsfalcon_404:HG4_Ill_svaba_320:HG4_Ill_scalpel_205:HG4_Ill_manta_55:HG4_Ill_Krunchall_312:HG4_Ill_GATKHC_413:HG4_Ill_GATKHCSBGrefine_199:HG4_Ill_250bpfermikitraw_316:HG4_Ill_150bpfermikitraw_295:HG3_Ill_svaba_320:HG3_Ill_scalpel_242:HG3_Ill_Krunchall_296:HG3_Ill_GATKHC_416:HG3_Ill_GATKHCSBGrefine_170:HG3_Ill_250bpfermikitraw_303:HG2_Ill_svaba_304:HG2_Ill_scalpel_226:HG2_Ill_Krunchall_292:HG2_Ill_GATKHC_388:HG2_Ill_GATKHCSBGrefine_165;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0943396;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.259259;PBcalls=8;Illcalls=31;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=14;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=10;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=1:29845251-29845255;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=104.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:52:1/1:3:28:0:5:1/1:0:20:0:12:1/1:0:33:./.:.:.:.:.:.
chr1	30346047	HG3_Ill_MetaSV_71	G	GAGAAGGAAGAATAAAATAAAGAGCTGATATTGATGAATTTAAAAACATAAAAAAGTAGAGGAAATTAATGAAACAAAAAGCAAGTACTTTGAAAAAAATAAAACAAACCGCTAGAAAAACTGACAAAGATAAACAGAGAGGACACAAATAACCAATTTCAAGAATAAAACAGAGAGATTACATCACTTTGCAGTCACTAAAATTAGAGTAAGGTAATAGCAGGAACAATTTCACAGCCATAAACTGGACAATTTAGAAGAAATCAAGCAATTCTGCAAAAACCACAAACTACTAAAACTCAGCCAAGATGAAATAGAGGAGAGATGAAAAAAAGAGAATAAAAGAATATTTAAAGGAATAATGGTTGAAAACATCCCAAATGATATAGGT	20	PASS	ClusterIDs=HG3_PB_pbsv_338:HG2_PB_pbsv_334:HG4_PB_assemblyticsfalcon_409:HG4_PB_SVrefine2Falcon1Dovetail_226:HG3_PB_SVrefine2Falcon1Dovetail_230:HG3_Ill_SVrefine2DISCOVARDovetail_196:HG3_Ill_MetaSV_71:HG3_Ill_GATKHCSBGrefine_175:HG2_Ill_SVrefine2DISCOVARplusDovetail_209:HG2_Ill_MetaSV_62:HG2_Ill_GATKHCSBGrefine_167:HG2_10X_SVrefine210Xhap12_236:HG2_PB_SVrefine2Falcon1plusDovetail_234;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_236:HG2_Ill_GATKHCSBGrefine_167:HG2_Ill_MetaSV_62:HG2_Ill_SVrefine2DISCOVARplusDovetail_209:HG3_Ill_GATKHCSBGrefine_175:HG3_Ill_MetaSV_71:HG3_Ill_SVrefine2DISCOVARDovetail_196:HG3_PB_SVrefine2Falcon1Dovetail_230;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0608365;ClusterMaxSizeDiff=0.0583016;ClusterMaxEditDist=0.176398;PBcalls=6;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=390;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=1:30346048-30346050;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=106.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:32:0|1:19:4:0:27:0|1:22:0:0:30:0/1:24:15:0/1:6:20:.:.:.
chr1	30569448	HG2_PB_SVrefine2Falcon1plusDovetail_235	T	TGGGCTGGGCCTGCACGGTGCCATCTCAAAGCTCCCGGGTGATCCTGTGTGCAGCTGGTGAGGCCCTCGCTTTGGAGCAGCGTCCTCACCAGCTGCACACAGGATCACCCGGGAGCTTTGAGATGGCACCGTGCAGGCCCAGCCCAGCCCTATCATGGCATTAG	20	PASS	ClusterIDs=HG2_PB_HySA_599:HG4_PB_pbsv_344:HG2_PB_pbsv_335:HG2_PB_PB10Xdip_2040:HG4_PB_assemblyticsfalcon_411:HG3_PB_pbsv_339:HG2_PB_PB10Xdip_2039:HG2_PB_SVrefine2PB10Xhap12_292:HG2_PB_SVrefine2PBcRplusDovetail_231:HG4_PB_SVrefine2Falcon1Dovetail_227:HG3_PB_SVrefine2PBcRDovetail_205:HG3_PB_SVrefine2Falcon1Dovetail_231:HG2_PB_SVrefine2Falcon1plusDovetail_235:HG2_10X_SVrefine210Xhap12_237:HG4_Ill_SVrefine2DISCOVARDovetail_181:HG4_PB_SVrefine2PBcRDovetail_193:HG4_PB_HySA_468;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_237:HG2_PB_SVrefine2Falcon1plusDovetail_235:HG3_PB_SVrefine2Falcon1Dovetail_231:HG3_PB_SVrefine2PBcRDovetail_205;NumExactMatchSVs=4;ClusterMaxShiftDist=0.198795;ClusterMaxSizeDiff=0.198795;ClusterMaxEditDist=0.295385;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=163;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=1:30569449-30569458;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=107.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:1:31:0:36:./.:0:9:2:6:0/1:7:19:./.:.:.:.:.:.
chr1	30774225	HG2_PB_SVrefine2PB10Xhap12_293	C	CAGGGGAGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGAAGGGAAGGGAGGGGAGGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_236:HG4_PB_HySA_471:HG2_PB_pbsv_336:HG2_PB_HySA_601:HG4_PB_assemblyticsfalcon_413:HG2_PB_PB10Xdip_2042:HG2_PB_PB10Xdip_2041:HG3_PB_HySA_445:HG4_PB_SVrefine2PBcRDovetail_194:HG2_PB_SVrefine2PBcRplusDovetail_232:HG2_PB_SVrefine2PB10Xhap12_293;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_293:HG2_PB_SVrefine2PBcRplusDovetail_232:HG4_PB_SVrefine2PBcRDovetail_194;NumExactMatchSVs=3;ClusterMaxShiftDist=0.225806;ClusterMaxSizeDiff=0.225806;ClusterMaxEditDist=0.225806;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=58;DistBack=93571;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=1:30774226-30774280;PctSeqSimilarity=0.9624;PctSizeSimilarity=0.9206;PctRecOverlap=0.8889;SizeDiff=-5;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=92;MatchId=108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:66:1/1:5:31:3:36:./.:1:0:0:3:./.:2:1:./.:.:.:.:.:.
chr1	31128045	HG3_PB_SVrefine2Falcon1Dovetail_234	G	GTGGTGGTGATGGTGGTGGTGGTGGTAGTGATGCTTGTGGTAGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGTGACAGTGGTGACTGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGACAGTGGTGACTGTGGTGGTGGTGACGGTGGTGACGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGGTGACGGTGGTGGTGACAGTGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGACGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGACGGTGGTGGTGGTGGAGACGGTGGTGGTGGTGGTGACGGTGGTGGTGATGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGAGACGGTGGTGGTGGTGGTGACGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGACGGTGGTGATGGTGGTGGTGGTGGTGACAGTGGTGATGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGAGGTGGTGGTGGTGGTGACGGTGGTGATGGTGGTGGTGGTGGTGACGTGGTGATGGTGGTGGTGGTGAGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGGTGGTGAGGTGGTGGTGGTGGTGGTGGTGACGGTGGTGATGGTGGTGGTGGTGGTGACGGTGGTGATGGTGGTGTGGTGGTGACATGGTGATGGTGGTGGTGGTGGTGGTGATGGTGATGGTGGTGGTGGTGGTGACGGTGGTGATGGTGGTGGTGGTGGTGACGTGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGGTGACGGTGGTGATGGTGGTGGTGTGAGGTGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGTGGTGGTGAGGTGGTGGTGGTGAGGTGGTGGTGGTGGTGGTGACGGTGGTGATGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGTGGTGACGGTGGTGGTGGTGACGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGTGGTGGTGGTGACGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGAGGTGGTGGTGATGGTGGTGGTGGGTGGGTGGTGGTGGTGGAGGGTGGTGGTGGTGGTGACGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGCGGTGGTGATGGTGGTGGTGGTGGTGACAGTGGTGATGGTGGTGGTGGTGACGGTGGTGGTGGTGGACGGTGGTGGTGGTGGTGGTGGTGACGGTGGTGGTGATGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGAGACGGTGGTGGTGGTGGTGACGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGACGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGACGGTGGTGGTGGTGAGACGGTGGTGGTGGTGGTGACGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGACGGTGGTGAGGTGTGGTGGTGGTGACGTGGTGATGGTGGTGGTGTGACGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGGTGGTGACGGTGGTGGTGGTGGTGGTGGTGACGGTGTGGTGATGTGATGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_298:HG2_PB_pbsv_343:HG3_PB_SVrefine2Falcon1Dovetail_233:HG3_PB_SVrefine2Falcon1Dovetail_234:HG4_PB_SVrefine2Falcon1Dovetail_231:HG2_PB_SVrefine2Falcon1plusDovetail_239;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_234;NumExactMatchSVs=1;ClusterMaxShiftDist=0.112235;ClusterMaxSizeDiff=0.112235;ClusterMaxEditDist=0.217137;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1866;DistBack=-570;DistForward=65;DistMin=-570;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=512;REFWIDENED=1:31128046-31128557;PctSeqSimilarity=0.9691;PctSizeSimilarity=0.9673;PctRecOverlap=0.7506;SizeDiff=-63;StartDistance=-450;EndDistance=-450;GTMatch=1;TruScore=89;MatchId=110.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:44:./.:0:37:0:0:./.:0:0:14:57:./.:0:0:1/1:2:197:.:2151:.
chr1	31205220	HG4_PB_pbsv_352	G	GGAGGAGTGTAGTGATTGGGTATGTGGGGATGTAGTGGGTGTGTGGAAGTGGGTGTGTATGTGGGTGTGTCGAGGAGTGGGGGTGGAATGGTGGGTGTGGGGGAGAGTGAGTTGTGGGTGTGTGTGGAATGTTTGAGATGCATGTGGGTGTGGCTTAGTTGGATTGTGTGTGGGGAGGTGTGGGGTGTTGGTGTGTATGTGGTGTGTGTGGTTATGTGGGAGGTGAGAGGGTGGAATGTCGTGAGTGTGTGTGGATGTGAGTGCGTGTGAGTGTGGCTGTGTGATTGGATGTGTATGGGGGTGTGTAGGTGGTGTGTAATGGGTGTAATGGTGTGTGTGGGTGTGTGGGGTGTTAATGTGTGTGGGTTGTGGATTGAGTGTGGATGTGTGTGGGTGTGTGGGGAGTTGCTGTTGTGAAGTGTGGGTTGGGGTATGTAGTTGTGTGCGGGGGTCGGGTGGGAGTGTGTGGATGTGGGGCGTTTGTGGTGTTGTGGGGGTTGGTGTATGTAAGTGTGGGTTGGGGTATGTGTGAGCATGTGGGTAAGGGGTGGGAGGTGTGAGTGGTGAGTTGTGGCTGTGTGTGTGGGTGTGGGTGTATGTGTGTGTGAGAGGGGGTTGGAGAGTGTGTGGGTGTGGGTGTGGGTGTCTGATGGGTTGGTGTTGTAATGTAAGGTGTGGAGTGTGGGTGTGTTGGTGGGGTGGGTGGTGGAGTATGTGCGTGTTGAGTGTGGCTCGAAATCAATGTGTGTGTGGGTGCGGTGGTTGGTGTGTATGTATTGGTGGGTGGGGTATGTGTGGTGTGGAGGGTGGGAGTGTTGGGTGTGGTATAGTGGCTGGTGTGTGGGCAGTGGGTGTTGGTGGTGCCTGTGGATGTGTGGAGTGTGTGGATGTGTGGGCTTGTAGAGGCGGTAGGGTGTGAGTGTAGATGTGAATGCCATGGGGGTGTGTGTGCATGTGAGTGTGTGGGACCATGTGTAGGAGGTGTTGGCCGTGTATGTGAGTTTGTTGGATATGGATGTGGGGGTGTAGGGGGTGTGAACTATGTGTGGATGTGTGTGTGGTTATGGGGTGTTGGTGTGTATAGGGTACGTATACGGTGTCGGTATAACCAAAAAAAAACATGTGGGGTAGGTGGGGGTGTGAAGTGTGCATCGGTGTGTAGTGGGTGGGTGGGTGTAGGTGTGTGGGTTGTGGAGGGGGTGTGTATGTTGGTTTAGTGTTGGGGGTTAGTGTGGGGGGTGTGTATGTGCGGTGTAAAAAAATGTGGGGGAGTGGGGCAGTGAGAGGTGGGTGTGAGTGTAATATGTATGTGGGGTTATGGGGCATGTTGGTGGGTGGTATGTTGTGACTGTGGGTGTTGGAGTAAATGTATGTGTGGGGGGTGGGGTGAAGGGGTGGAATGTGGGGTGATGTGGGGTTGTGGGGTATGTTGGTGGTGTAGGGCATGTGAGTAGTTGAGGGGGTGTATTGGGTGTGTACTGTAGGTGTAGGTGTTGTGGAGTGTGTGGAGAGTATTGTGGTTGTGTTGCGGGGTTGTGGGCAATTGTTGCTGAGTGTGTAATGTGGGTGAGTGATGTAATTGTTGTGAGTGTGGGTGTTGGGGGTGTGGTTGGGGTGTGTATGTAGGGGGTGGGGTAGGGTGGTGATGTGGTGTGTGGGGGTGTGCGGTATGTATGTTGTGGGTTGGTATGTGGGGAGTGTGAAGTGGTTAGTTGAAGGGTGATGATATGTGGTGTAGATGTGTGGGTGTGTCGGGAGTGGGGATTGAGGGTGTGTGGGGGGGTGTGGGTGTATGTATGTTGGCTGGGCCTGTTGTGGGCATGTGAGGTGAGGGTGTGTATGTAGCTGTAGATGTGTGGGGTGTGGGGGTGGGGTGAGGGGTGGTGTGGGGCGAAGTGTGGATGTGTATGTGGTGGGTGTGGTGTGGGGCGTGTGTGGGGGTGCGTATGTAGGTGTAGATGTGTCGGGAACCTGTTGGAGGTGGGGGTGAGGGGTGGTGTTGGGTGTGGTGGTATGATGGGTGTGGTGTGGTTTGTGGGTGTGTGTAGTTGGGGTGTGTATGTAGGTGTAGATAGTGTGGGACATATGTGGGGGTGGGCTGTGAGGTACGTGTGGTTGGTGTGGGGGTTGTGGGCATGTTGGTGGGTGTGTATGTTTGTGGAGTGTGAGGTGTTCGGGGCGCGTGGAGTGTGTGGGTGTGATATGTGGGGGGTGGGGGTGAGGGATGGGTGTGGGCTGTGTGGGTGGGTGTGTATTTGATGGGTGTGATTTGGGGCATGTGAGTTTAGTTTAAATGAGGGTGTATGTTGGTGTAGTATGTGTGAGGTGTGTGGGGGTGGGGTGAGGGAGGGTGGTGTTGGCGGGGTGTGAAGTGTGGGAAAGGGTTGGGTGTGTATGTTGTGAGTGTAGGTGTGGGGGTGTGAGTTGGGAGTTGTTGTGGGTGTGTATGTAGCTGAGATGTGTGGGTGGTGGAACAATACAGGTGGGGGGAGGGGGTTGGGCGTTGGGGTGTGGGTGTGTACTGTGTGGTGGGCGTGGTTGTGGGCATGTGAGTGTGAGTGTGAGGGTGTGTAATGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_233:HG3_PB_HySA_450:HG2_PB_PB10Xdip_2062:HG4_PB_pbsv_352:HG2_PB_pbsv_344:HG3_PB_pbsv_343:HG2_PB_PB10Xdip_2063:HG2_PB_HySA_609:HG4_PB_HySA_476:HG3_PB_SVrefine2PBcRDovetail_208:HG4_PB_assemblyticsfalcon_421:HG3_PB_SVrefine2Falcon1Dovetail_235:HG4_PB_SVrefine2PBcRDovetail_198:HG2_PB_SVrefine2Falcon1plusDovetail_240:HG2_PB_SVrefine2PB10Xhap12_299:HG2_PB_SVrefine2PBcRplusDovetail_236;NumClusterSVs=16;ExactMatchIDs=HG4_PB_pbsv_352;NumExactMatchSVs=1;ClusterMaxShiftDist=0.232234;ClusterMaxSizeDiff=0.232234;ClusterMaxEditDist=0.291024;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=2576;DistBack=13784;DistForward=39429;DistMin=13784;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:31205221-31205221;PctSeqSimilarity=0.9277;PctSizeSimilarity=0.988;PctRecOverlap=0.9876;SizeDiff=31;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=96;MatchId=111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:./.:0:3:1:5:./.:0:1:0:0:0/1:4:14:./.:5:79:.:2598:.
chr1	31818394	HG3_Ill_GATKHCSBGrefine_184	T	TATATATATATATATATTATATTATATATATATATAATATATATATATAATATA	20	PASS	ClusterIDs=HG3_PB_pbsv_350:HG4_PB_HySA_483:HG4_PB_pbsv_360:HG4_PB_SVrefine2PBcRDovetail_201:HG4_Ill_scalpel_223:HG4_Ill_SVrefine2DISCOVARDovetail_188:HG4_Ill_Krunchall_326:HG4_Ill_GATKHC_440:HG4_Ill_GATKHCSBGrefine_209:HG4_Ill_250bpfermikitraw_338:HG4_Ill_150bpfermikitraw_314:HG3_Ill_scalpel_259:HG3_Ill_manta_53:HG3_Ill_Spiral_244:HG3_Ill_SVrefine2DISCOVARDovetail_208:HG3_Ill_Krunchall_319:HG3_Ill_GATKHC_444:HG3_Ill_GATKHCSBGrefine_184:HG3_Ill_FB_220:HG3_Ill_250bpfermikitraw_327:HG3_Ill_150bpfermikitraw_294:HG2_PB_SVrefine2PBcRplusDovetail_240:HG2_PB_SVrefine2PB10Xhap12_303:HG2_Ill_scalpel_248:HG2_Ill_manta_60:HG2_Ill_SVrefine2DISCOVARplusDovetail_219:HG2_Ill_Krunchall_313:HG2_Ill_GATKHC_418:HG2_Ill_GATKHCSBGrefine_177:HG2_Ill_FB_220:HG2_Ill_250bpfermikitraw_335:HG2_Ill_150bpfermikitraw_285:HG2_10X_SVrefine210Xhap12_250:HG3_PB_HySA_461:HG2_Ill_breakscan11_2965:HG2_PB_pbsv_352:HG2_PB_PB10Xdip_2073:HG2_PB_HySA_621:HG4_Ill_svaba_337:HG4_Ill_scalpel_222:HG4_Ill_GATKHC_439:HG4_Ill_GATKHCSBGrefine_208:HG4_Ill_250bpfermikitraw_337;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_250:HG2_Ill_150bpfermikitraw_285:HG2_Ill_250bpfermikitraw_335:HG2_Ill_FB_220:HG2_Ill_GATKHCSBGrefine_177:HG2_Ill_GATKHC_418:HG2_Ill_Krunchall_313:HG2_Ill_SVrefine2DISCOVARplusDovetail_219:HG2_Ill_manta_60:HG2_Ill_scalpel_248:HG2_PB_SVrefine2PB10Xhap12_303:HG2_PB_SVrefine2PBcRplusDovetail_240:HG3_Ill_150bpfermikitraw_294:HG3_Ill_250bpfermikitraw_327:HG3_Ill_FB_220:HG3_Ill_GATKHCSBGrefine_184:HG3_Ill_GATKHC_444:HG3_Ill_Krunchall_319:HG3_Ill_SVrefine2DISCOVARDovetail_208:HG3_Ill_Spiral_244:HG3_Ill_manta_53:HG3_Ill_scalpel_259:HG4_Ill_150bpfermikitraw_314:HG4_Ill_250bpfermikitraw_338:HG4_Ill_GATKHCSBGrefine_209:HG4_Ill_GATKHC_440:HG4_Ill_Krunchall_326:HG4_Ill_SVrefine2DISCOVARDovetail_188:HG4_Ill_scalpel_223:HG4_PB_SVrefine2PBcRDovetail_201;NumExactMatchSVs=30;ClusterMaxShiftDist=0.172414;ClusterMaxSizeDiff=0.172414;ClusterMaxEditDist=0.258621;PBcalls=10;Illcalls=32;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=53;DistBack=-1;DistForward=10;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=1:31818395-31818429;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:38:./.:0:27:0:3:1/1:1:11:0:6:1/1:1:38:./.:.:.:.:.:.
chr1	31967617	HG3_PB_pbsv_353	T	TATAGATATAATATATATAGTAAATATATAGCTTATATATATAAAATATATAATATATATAATATATATAATATAATATATTAATATATATATATATATATAATATATATAATTATATTAATATATAATAAATATAGATTAATATTATTATATATAATAACATGTATGATATAATTAAATATTATAGATATTTATATATAATACATGTAGATAATAATGATATTTAATATATATATATAATACATGTATATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_242:HG3_PB_pbsv_353:HG2_PB_SVrefine2Falcon1plusDovetail_246:HG2_PB_SVrefine2PB10Xhap12_305:HG4_PB_SVrefine2Falcon1Dovetail_237:HG4_PB_SVrefine2PBcRDovetail_202:HG2_Ill_SVrefine2DISCOVARplusDovetail_220;NumClusterSVs=7;ExactMatchIDs=HG3_PB_pbsv_353;NumExactMatchSVs=1;ClusterMaxShiftDist=0.311594;ClusterMaxSizeDiff=0.311594;ClusterMaxEditDist=0.311594;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=251;DistBack=0;DistForward=18;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=1:31967611-31967635;PctSeqSimilarity=0.9029;PctSizeSimilarity=0.9522;PctRecOverlap=0.1713;SizeDiff=12;StartDistance=-202;EndDistance=-202;GTMatch=1;TruScore=67;MatchId=114.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:37:1/1:1:22:2:14:./.:1:0:0:1:./.:5:0:./.:.:.:.:10760:.
chr1	31971541	HG2_PB_SVrefine2Falcon1plusDovetail_248	A	AGGGAAAGTTCCTATGGATAGAAACACAGACACAAACAGCAGCGGTGAGAGTGAGGCAGTTTGTATATATTTTCTTTTTATATCTTAATCTTCATAACTGGCCTTAAGGCCCCATTTTCCAGATGAAAAAACTGAGGTTCAGAGCAGTCAACTAACTTGCCTGTCGCAAATTCATTGCGAGTGGCACACCAGGCTTGGTAAGTGGTAAACAAGGCTGATGTCGAGCCCTTGGGATTAAGCCCTCTGCTATACCAAGGAGAAAGGGCCATAGAGGGCCAGTGAGCGAGAGGCAGGCCGGGAGAAAGGAAGAACAGCTGGTCCAAGGTCTCAGAACAGGTTCGTTTCTGGGGAAAGACCCCTATCTCTGCTGCCCCAGGCAGAAGAAGACTTGGGCCCTTTGAAAGGAAAATAAAGCCTCGGGATCCCCAAATCACTAAGCCAAGGGAAAAATCAGGCTGGGAACTATGTCAGGCAAACCCACCTCCCATTTTATTCCTAAATAAGATAGCTACATACCTCCCTCACAAACTGCCCACAAGAAAATTCGTTGTGGGCCTCAAGGTCTTTATCCTAAAACAGTTCTGTTGAATTTCACCCTGGCAATGTAAACTAATAGCTGATCTTCAGAGGTGCAGACAGAAAGTCATCCTTCTGCTCACCTGAGACAAATGCATATCTGATTGTTTCCTCTGCCCTATTGTTTACGTAAAAATGCAGATTCACTGAGTCAGATTAAATTGTATATTCAGTGGAAGGCTGATCAAGGACTCAATGCAATCTTTCATCTCTTATCAACCTTTTGTCTCTTATGACCTGGAAGCACCCCTGCCGCCTTCAAGCTGTCCCACATTGCCAGACTGAACCAATGTACATCTTACACATATTGATTGATGTCTCCTGGCTCCCTATGAATCAAAGCAAGCTGTACCCCGACCACCTTAGGCACATGTCAGGACCTCCTGAGGCTGTGTGATGGGTGCATCCTTGAGCTTGACAAAATAAACTTTCTACATTGACTGAGATCTGTCTCAGATATTTGGGGTTCACAGCCCTGTCATCTCTGCCCTCCTCCCCACCTCCTGCCCTGGGCATGGCTGGCAGACAAAAACCTGGAGAGCAGCCCACTCCCTGTTGATTGTCCTTCACTGGAACAGGCAGAGGAGGTTCTGGGTCACAGCACAGAGGTGGGGTGTAAGCCTGCAGGAGATTACAGCTGATCCCTGCAGTGGGGCTGCCCCAAGGTGGTGGCTTCAGCCTGGGAGGGCCAGAAGAGCTCAGGTGAGACCTCAGCAGTCCACGTGGAGAGGGAGGGAGGGGAGAGGGTGGGGAGATGACTAGACCCTGAGTGACGCACACAGGCTCCCACTTCCATTCGAAGACACTTCCAGTGAGATGCTTAAATCTGCAGTGGAGGGCAAGAGACACGACCCCAGGAGACAGCAACTGGTCTCTGAGGCGGTGGAACCAGCTCCCTGTTGGAGTCTGAGGCCTTGGTCCTACTCCCAGTTTCACTCCTGGTTTGCTGAATGATCTGGAGATCTCTGGGCCCCACGGCTTTCCATCTGCAGAGCGGAAAGAGTGGATGGGAAGTTTCTAGGTTCCCTCCACTTCTCATCATTGCCGGCATTCGCTTATAACAGGGGTCGGACTCCTCTCTGTGCACCTGTCCTGCGGGCAGACCTAGGAAGGTACATTTTTCTGGCTGGGAGATTTGGGCTGAGCAGTCCAGGGTGGCCGAGGTTTAGAGGGACAGCTAGGAAGTACTTCCCCTATCCCTTAAGATCTGGGCTGGACTCTGCTCTTCCCATAGGGATCTACCTGAAGCCCAGGAACACCGGAGATCTGACTCCTGAAACTGCCTTTGCAAAATTAAAACACCGAGAGAAATCTAACACAGCTGACTCCATATTGCTGCTTTTTTTAAAAAAAAATTAGCTTTTGGTGTACAAGTGTTTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTTTTGTTACATGGATGAATTATACAGTGGTGAATTCTGAGGCTTTAGTGCACCCATCATCTGAGTAGGGTTAATTGTACCTAATGTGTAGTTTTTTTTAATCTCTAGCACCCCTCCAGCCTCCCCCTTCTGAGTCTTTGAAATCCATTATATTACTCTGTTTGTCTTTGTATATTCATAGCTTAGCTCCCACTAGTAAGTGAGAACATACGGTTTTGGGTTTTCCACTCCTGTGTTACCTCACTTAGAATACTGGCCTCCAGGCTGGGCACAGTGGCTCATGCCTGTAATCCCAGCATTTTGGGAGGCCAAGGTGGGCAGATCACTTGAGGTCAGGAGTTGGAGACCAGCCTGGCCAACATGGCAAAACCCTGTGCCTACTAAAAATACAAAAACTAGCCAGGTGCGGTGGCAGGTGCCTGTAGTCCCAGCTACTAGGGAGGCTGAGCAGAAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGCGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCATCTTAAAAACAAAACAAACAAACAAAAACACACAAAAGACTTATTTGGGAGCTCTGGCTCCCAGGGCCTGTGGGAGTGGGGAGCTGGGGCTGGGAGGAGGCTGGGTCATGAGAGCAAGTCTTTTCCAGGATGCCAGGACCATGCCCGGTAGAGGGCTCAGTTGGAGTTTCAGGGATGAGCACCTGCCTCGGGGCCTGAAGGAAGCCCATGGAAGGCCATGGCCAAAGAAGCTCATCGCCCTGGGGCCAGAAGAATCTGCCCAGCAGATGGTCCTGTGGAGGATCCAGGAGCTTTCTGACTGAGTATGGAGGGAGGTGAGAGACGGGGAGTTGTGAGCCTCAGGTCTTCCTTAGTGGCAAGAAATAAGGCTTTCTGTTTCACCGTTCTGTAACGCCATTAGGCCGTCTCTCTCAAGGCTCTCTTGTTCTGGGGCTAATGGGAAAGCATGACTTTTGTTCTTCCTGCCCTGCCTGCTTCCACCACTGGGGTTTTACCCAGTGCCAAGCTGTGGGGTCCTCCAGCTTTGGTCTACAAAGATGATTGCCTGCTTGTCCTCCTGGCTTCCCTGGCTCCCTGGGTTTTTAGGGCTGTGCTGCCTCTGGACATATTCTCGTCTGGACCTGATTGTCACCATCACTGGAGAACCTGTTGGCAGTGCAGACTCTTTGTCCACCCTAGACTGACTGCATGGAGCACACAGTTGACAGGATCCTGGGGATTTGCCTGCACATGAAGGCTGGGAAGGCCTGCTCTAGACTCACCCGGTGACTTACCATTTCCCCACTGGCTTCCAGGGGCTCCATCCTACCACCCCTCAGATTCCCTTAGGGCACAAAGTCTCAGCTCTCTTACCATCTTCACCACCCCATCCCCGCCAGTCAGGGACCCTCTTCCTGGTCAGGGAGGGCCTTCTATCGGTGTCACCATGACATTCTTCTTGTACCCTGGCATCCTCTTCTCCCAAGGGCTAAGCTTCCCTAAGAAGGCCGCCTCCTGCCTGGCCACATCTGCCTCCTGCCTGGCCACATCTCTCCCAGGGACATTATAGAGCCAGACACTGGCATCAATAAGGGGGAGAAGAAGAGAGAAAATTAGAAGAAAAAAATAGATATCTCGAAAATATCCTGGCCTACAGGTGTTCCTGAAGCCATTTCCTTTTGGGATTGAATGTCAACTGTGCTGCTGTCCAGCAGTAAGAACTTGGTGAGGCACTCCAGCCCTCTGCACCTCAGTGACTGCATCTGTGCAATGGGAATGATTTATATAGTATCTCCATCCCTTCCCCCAGCACAGTGTGTGGCTCATGACAGTTGATTAATCAGCTCATGCTGCCTGAGTCCATGCCTTTTTCTCTGTGGCTCAGTTGGATGGAAGCTCCACAAAGACGAGGATTTTTGATCTGTTTTCTTCACTGCTCTTTCCCCAGTACCCAGACTAGAGCCTGGCACAGAGTAGGTGCTGGATAACCCTGTTGAATGACTGTAGAACAAATAGCCTGGAGCTGCCCCAGCCCAGCAGGCTCCTCTCTCCTACCCAGGACCGTGGCAAGGCAGAATGGACCAGTGTCAAGGGCGGTCTCCCTAGGCTTAGGAGACCTGGGTTCAGACCCTGTCTTTGCCATGCTTTTGCTATAGGACCTTGAGCCAGTGACCACCTTTTTGAGCCTTTGCTTCCCCATCTGCAAAATGGGGATAACAGCAGCCTTTACTTCATAGAGCTGTTATGAGGATTAAGTGAGATAATCCAGCCCCTCAGCCTTTCCTCCCTGTCTCCCTGCCCCGTAGGACCAGCAAGACCCCTTCATACTGGCTGACCTGGACATACTGGCCAGCCGCCATCAGGCCTTCTGCCAAGCCCTGCCACAGGTCTCGCCCTTCTATGCAGTGAAGTGCAACAGTAGCCCTTGGGTGCTGCGTGTCCTGGCCGCCCTGGGCACCGGCTTTGACTGTGCCAGCCAGGTAAGCCTGTGCCCACCGAGGATTAGGCCAGGCCAGCTGGAAGGGGTGAATCCATGCTGCTGCTGCTGAGGTCATGAATAAGCGTCCCCTGTCCCGCAGAGCACTTGAAATATGCTAAGCACACTGCAGGGGGCCTAACATGCATTCTCCTTGATCCTCCCATCGGCTCTGCAAGGTAGTCAGGGGATCCACATTCATAGAGGAGGAGACAGCCTTAGGGGGATCACTTGCCCATGGGCCAACATATGGTAAGAGACAGAGATGACCGATCCAAAGTTGGCATTTTTTTCTTACGCCAGGGGTGAAACATTCCAAGGGGTTCTTAGCAGAAGGGGATTCAGCAATGTTGAGGGAGGTTAGAGCCGAAGCCCAAGGGTGGGAAGGGGGAGAACTCAGGATGGGAGTATTTTGCTGAGCCTCTGTCCTTCCTTCCTTTCTTTTTAAGACTAGTCAAGTGTAGTAGTGAGAAGTGGGAAAGAAGAGTAGAACAAGGAGTTCATCTGTAACTGACTGTTAACAGTCAATTGAGATAACTCACTGCCTTCGGACCAGCCCTTCCTCCCTTTCTGAGGAGCCCTCCACTAAGCAGGATTAAGTGCACCCGCTGCCTCTAGGAAGCCAGCCCATCTCCTCTCTATGGGGCTGAAATGGGGAGGGGTTGGTTCTAAACTGAGACTATGAGCACCTGGAGTGCCCGGCACATTGAGACTATGAGCCCTGCCCTGCCCTTCCCTGCCCTGCAGGGACTCCATAATGAGCACCCGTCAGCCCCACGCAGGGCTCCTGCCTGGAAGTGAGGGAGCAGGGGTGAGACCCAACCCGGGGTTTCATCAGGGCAGCCTCTTTGGCTCATGCACAGTGTTTCTGTCCCCACATAGCTGGGGTGGGGGCAGTGATGCAGCCCCCAACCCTGGCTCTTGGCCACCCCAGGTGGAACTGGAGCAGGTGCTGGGCCTGGGTGTGGCCCCCTCGCGCATCATCTATGCCAACCCCTGCAAACCTGCCTCCCACATCCGGTATGCTGCCCAGCACGGGGTGCAGCTCCTGACCTTTGACAGCGAGGAGGAGCTCACCAAGGTGGCCCAGCACCACCCCAGGGCCAGGTGAGTCCAGCAGGGATGCAGGCAGCTAGGGTGAGGGTCAGCAGTAAAGAACGAATCACCCAACACAGCACACCCCTGACAAATGCTGATCTGAGACAAGTGAAGGGGAGGACCCTCAAGGCCCAGCCATTTTAAAAGGGTCTGGCAGCTGCCTTTGGAGTGAGACAGCCCAGGTTCAAATTCTGGCATTGTTGCTTACCTGATGTATGCATTGGGCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCTCTCTGTTGCCCGGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCTCTGCCTCCGTGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACTGGCGCGTGCCACCATGCCTGGCTAATTTTTGTATATTTAGTAGAGACAGGGCTTCACCATGTTAGTCAGGCTAGTCTTGAACTCCTAACCTTGTGATCCGCCTGCCTTGGCCTCCCAAAGTACTGGGATTACAGGTGTGAGCCACCGTGCCCAGCCAAGTCTCTTTTTTTTGAGACAGAGTTTTTCTCTTGTTGCTCAGACTGGAGTGCGTGGTGCAATCTCAGGTCACCACAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCTGCCTCCGGAGTAGCTGGGATTACAGGCTCCTGCCACCACATCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCAAATGTTCTGGAATTACAGGCTTGAGCCATCGTGCCCCGCCTGGGCAAGTCTCTTTTAACATTTTTAACACTCGGTTCCTTCATTTACAACTTGGGGCATGTTGTCTGGCACATAGTAGGTGCTTACCAATACTATCATTTTTCTACCCTCCCTTCTCTGGTTGTACCTGGGGAAAGTAGATGTATACACACGTGTGTTGGGCTGGTGTGATGGCCGCATGGATTTGGTGGCATTGGAAAACCTCCCAGATGCGGGGATCAGCTGGGCCTGGGTGGGGGTGGTATAAGAAGCCCTGGGCTCTTTGGCATCTCTGGCTAAGTGCTCTCTGCCTCCTCCCTATCCTTGGTGTCCCTCCTCCGGACTGCTCCTCCGGCTGAGGACCCAGGACAGTCAGAGCACCTTCCCTCTGAGCACCAAGTTCGGGGCCAGCCTGGAAGCCTGTGGGCACCTGCTCACGTCTGCCAGAGACCTGGGGTTGGCCGTGGTCGGAGCCAGGTGAGTGACGCCTGAGGACTCCAGGAGCCCTGGGTTCTGGTCCTTCCCTTGCTGTGGATAACTGCGACAGAGACAGAGAGACACAGTCACACATAAGGCACGAAACCACTGGGGCCAAATGCAGAAACAAACAGCTGGAAATATAACTGATTACACTGGCATAAGTGTAATCAGTTGGGGCCCATGGCAAGCTGTGGCCCCTCTCTGGGCCTGTGAGACCCCATCTGTCTAAAGGGGCAGGATATGATGTGAAGGTTACTCAGGGCCTCCCTGCTCTGAGGCCCTGGGTTTGGTGTCTTGTTGTGAAGTGTCCATGAGGGGAAGGGCAGCCCACGTGGCAGTGCTGGGATCAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2966:HG4_PB_pbsv_363:HG2_PB_PB10Xdip_2080:HG3_Ill_SVrefine2DISCOVARDovetail_210:HG4_PB_SVrefine2PBcRDovetail_203:HG4_Ill_SVrefine2DISCOVARDovetail_190:HG2_Ill_SVrefine2DISCOVARplusDovetail_221:HG2_10X_SVrefine210Xhap12_251:HG2_PB_SVrefine2PB10Xhap12_306:HG2_PB_SVrefine2PBcRplusDovetail_243:HG3_PB_SVrefine2PBcRDovetail_214:HG2_PB_SVrefine2Falcon1plusDovetail_248:HG4_PB_SVrefine2Falcon1Dovetail_238:HG3_PB_SVrefine2Falcon1Dovetail_239;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_248;NumExactMatchSVs=1;ClusterMaxShiftDist=0.082934;ClusterMaxSizeDiff=0.0828009;ClusterMaxEditDist=0.121938;PBcalls=9;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=7212;DistBack=3622;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=1:31971542-31971544;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9964;PctRecOverlap=0.9964;SizeDiff=-26;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:0:18:0:20:1/1:0:16:0:15:1/1:0:38:1/1:0:524:.:10760:.
chr1	32273013	HG2_PB_PB10Xdip_2082	A	AGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGGAGGGGAGGGGGAGGGGAGGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGGAGGGGAGGGGGAGGGGGAGGGGAGGGGAGGGGGGAGGGGAGGGGAGGGGGAGGGGAGGGGGAG	10	PASS	ClusterIDs=HG3_PB_pbsv_354:HG3_PB_SVrefine2PBcRDovetail_215:HG2_PB_PB10Xdip_2081:HG2_PB_PB10Xdip_2082:HG2_PB_pbsv_354:HG4_PB_SVrefine2PBcRDovetail_204:HG2_PB_SVrefine2PBcRplusDovetail_244:HG2_PB_SVrefine2PB10Xhap12_307:HG4_PB_SVrefine2Falcon1Dovetail_239:HG2_PB_SVrefine2Falcon1plusDovetail_249;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_2082;NumExactMatchSVs=1;ClusterMaxShiftDist=0.337391;ClusterMaxSizeDiff=0.337391;ClusterMaxEditDist=0.347826;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=292;DistBack=-34;DistForward=0;DistMin=-34;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=1:32272993-32273046;PctSeqSimilarity=0.9717;PctSizeSimilarity=0.9511;PctRecOverlap=0.9544;SizeDiff=-15;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:1:12:1:14:./.:0:2:0:1:./.:0:1:./.:.:.:.:.:.
chr1	33005341	HG4_Ill_GATKHCSBGrefine_214	G	GGCGCCGAGGCGAGCGGGCGCCATTTGCAGCCCGGGGCGCAGTGGCGGCGGCGGCGGCGCCGGCTCCGAGGGGCTGTGGGCGGCCACGGAGGAGGCGCGGGCGGCTGCGGCGGCGGCGGCGGGCCCAGCCCGGGGCGGCGGCGGGCGTTGGTGGGCACCGGCTCCCGGCCGCCCCTCCCCGCGCCCGGCCGCGCCTCCCAGCCCGCGGGGCCGGCCCTTTCTGC	20	PASS	ClusterIDs=HG2_PB_pbsv_355:HG4_PB_assemblyticsfalcon_435:HG4_PB_pbsv_366:HG3_PB_assemblyticsfalcon_446:HG2_PB_SVrefine2Falcon1plusDovetail_250:HG4_PB_SVrefine2PBcRDovetail_205:HG4_PB_SVrefine2Falcon1Dovetail_240:HG4_Ill_SVrefine2DISCOVARDovetail_196:HG4_Ill_MetaSV_76:HG4_Ill_GATKHCSBGrefine_214:HG4_Ill_Cortex_47:HG3_PB_SVrefine2PBcRDovetail_216:HG3_Ill_SVrefine2DISCOVARDovetail_216:HG3_Ill_MetaSV_73:HG3_Ill_GATKHCSBGrefine_187:HG3_Ill_Cortex_57:HG2_PB_SVrefine2PBcRplusDovetail_245:HG2_PB_SVrefine2PB10Xhap12_308:HG2_Ill_SVrefine2DISCOVARplusDovetail_229:HG2_Ill_MetaSV_67:HG2_Ill_GATKHCSBGrefine_178:HG2_Ill_Cortex_90:HG2_PB_PB10Xdip_2084:HG2_PB_PB10Xdip_2083:HG2_Ill_breakscan11_2967:HG3_PB_pbsv_356;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_Cortex_90:HG2_Ill_GATKHCSBGrefine_178:HG2_Ill_MetaSV_67:HG2_Ill_SVrefine2DISCOVARplusDovetail_229:HG2_PB_SVrefine2PB10Xhap12_308:HG2_PB_SVrefine2PBcRplusDovetail_245:HG3_Ill_Cortex_57:HG3_Ill_GATKHCSBGrefine_187:HG3_Ill_MetaSV_73:HG3_Ill_SVrefine2DISCOVARDovetail_216:HG3_PB_SVrefine2PBcRDovetail_216:HG4_Ill_Cortex_47:HG4_Ill_GATKHCSBGrefine_214:HG4_Ill_MetaSV_76:HG4_Ill_SVrefine2DISCOVARDovetail_196:HG4_PB_SVrefine2Falcon1Dovetail_240:HG4_PB_SVrefine2PBcRDovetail_205;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0881057;ClusterMaxSizeDiff=0.0881057;ClusterMaxEditDist=0.221739;PBcalls=13;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=223;DistBack=46028;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10225;REFWIDENED=1:33005342-32995829;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=117.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:0:10:0:15:./.:0:0:0:2:1/1:0:15:./.:.:.:.:.:.
chr1	33046680	HG2_PB_SVrefine2PB10Xhap12_309	T	TTATATATAGATAATATATTAAATATATATAATATATAATATATATAACTATATTATATATATTTATATATATTAAATATATTATAACTATATTATAATATAGTTATATATAAATATATAACTATATTATAATATAGTTATAATATATAATATATATTATAACTATATTAAATATATAAATTATATAATATATATTATATATTGTATATTATATAATTTATATAATATATTATATGTTATATAATATATATTATATATTGTATATATTATATTATATATTATATATTTTATATATCATATATAGTATGCTATATAATATATATTTTTATATATTATATAGTATACTATATATTTTTATATATTATATATAATATATATAATTATATATCATATATATTTATATAATATATGATATATAATATATAATATATATTATGTATTATATAATTATATAAAATATATCATATATTATATATTATAAATAATATATTATATATATTATATATTATAAATAATATATTATATATATTATATATTATAAATAATATATTATATATATTATATATTATAAATAATATATTATATATTATATTATATATTATAAATAATATATTATATATTATATTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_240:HG4_PB_SVrefine2PBcRDovetail_207:HG3_Ill_MetaSV_74:HG4_Ill_MetaSV_77:HG4_Ill_GATKHCSBGrefine_215:HG2_Ill_MetaSV_68:HG2_PB_HySA_636:HG2_PB_SVrefine2Falcon1plusDovetail_251:HG2_PB_HySA_634:HG2_PB_PB10Xdip_2085:HG3_PB_pbsv_357:HG2_PB_pbsv_356:HG4_PB_pbsv_367:HG2_PB_SVrefine2PBcRplusDovetail_246:HG3_PB_SVrefine2PBcRDovetail_217:HG2_PB_SVrefine2PB10Xhap12_309:HG4_PB_SVrefine2PBcRDovetail_206:HG4_PB_SVrefine2Falcon1Dovetail_241;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_309:HG2_PB_SVrefine2PBcRplusDovetail_246;NumExactMatchSVs=2;ClusterMaxShiftDist=0.32247;ClusterMaxSizeDiff=0.32247;ClusterMaxEditDist=0.341761;PBcalls=14;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=626;DistBack=11692;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=278;REFWIDENED=1:33046681-33046958;PctSeqSimilarity=0.9643;PctSizeSimilarity=0.9247;PctRecOverlap=0.8109;SizeDiff=-51;StartDistance=-103;EndDistance=-103;GTMatch=0;TruScore=89;MatchId=118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:3:20:1:21:./.:0:2:0:0:./.:1:19:1/1:3:123:.:.:.
chr1	33108378	HG2_Ill_MetaSV_69	T	TTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCAGACTGGAGTACAATGGCACAATCTCGGCTTACTGCAACTTCCGCCTCCTGGGTTCAAGCAATTCCCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGACGTGTGCCACCATGCCTGGCTAATTTTTTGTATTTTAGCAGAGACGGAGTTTCACCATGTTGGCCAGGATGCTCTCAATCTCCTTACCTCATGATCCGCCAGCCTCGGCCTCCCAAAGTGCTGGGATTATTACAGGCATGAGCCACAGTCCCAGGTCTTTAGACAAACTCAACCCATTATCAATCAAAAAATGTTTAAATTCACTTATAGCATGGAAGCTACCCCACCCCTCCCCCCTCCCCCCTCCCGCCCCCCCCAGCTTTGAGTTGTCCCACCTTTCTGGACCAAAGCAATGTATTTCTTAAACTTAATTGATTAATGTCTCATGCCTCTCTGAAATGTATAAAACCAAACTGTGCCCTGACCACCTTGGGCACACTGAGCACATGTTCTCAGGATCTCCAGAGGGCTGTGTCAGGGGCCATGGTCACATTTGGCTCAGAATACATCTCTTCAAATATTTTATAGAGTTCGACTATTTTGTCAACAATTAAAAAGGCACCTATTCAGAATATTAAAAGTTAAGATTTAATAACATCAACAGTTCTTACTGATTCATCAAATATTTTTTTTTTTGAGACCGAGTCTCGCTCTATCGCCCAGGCTGGAGGGCAGTGGCACAATCTCTGTTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAATAGCTGGGACTACATGCGCGTGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGAGTTTCACAACGTTGGCCAGGATGGTCTCGATCCCTTGACCTCATGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGGCGCCTGGCCAAAACAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_357:HG4_PB_SVrefine2Falcon1Dovetail_242:HG4_PB_pbsv_368:HG3_PB_pbsv_358:HG4_PB_HySA_495:HG4_Ill_MetaSV_78:HG3_PB_SVrefine2Falcon1Dovetail_241:HG4_PB_SVrefine2PBcRDovetail_208:HG4_Ill_SVrefine2DISCOVARDovetail_198:HG3_Ill_SVrefine2DISCOVARDovetail_219:HG2_Ill_SVrefine2DISCOVARplusDovetail_230:HG3_Ill_MetaSV_75:HG2_PB_SVrefine2Falcon1plusDovetail_252:HG2_PB_SVrefine2PBcRplusDovetail_247:HG2_Ill_MetaSV_69:HG2_10X_SVrefine210Xhap12_260:HG2_PB_SVrefine2PB10Xhap12_310:HG2_PB_PB10Xdip_2087:HG2_PB_PB10Xdip_2086:HG4_PB_HySA_494:HG3_PB_SVrefine2PBcRDovetail_218;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_260:HG2_Ill_MetaSV_69:HG2_PB_SVrefine2PBcRplusDovetail_247;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0818882;ClusterMaxSizeDiff=0.0789981;ClusterMaxEditDist=0.228491;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=1002;DistBack=32282;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8834;REFWIDENED=1:33118155-33108674;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.999;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:55:1/1:1:32:0:18:1/1:0:8:0:8:./.:0:3:0/1:24:124:.:1062:.
chr1	33652418	HG3_Ill_SVrefine2DISCOVARDovetail_223	A	TAAATAAAACAATGTTGTATGTTGACTGGTTGCTAAAAATGTGGCCAGAGACTCACAGGAGCCTGATGCCATAGCTCTTTTAAGGGCTACAGAGAGTAATGAGAGTCGGCTGTATTTAAAATTGTTGCATGTAACAGCATCCACCAATACAAGATACAACATCCACGTCCCTTCCTATCCAGGTTACATTTGCTCAAGCCCACTTGAAGGCAGAGGAGCAGAAGAAGGAACATTGAGCAACTTCCGAGTGCCACGCACTGTGCTAGGTGCTTCATGTGTGTTATTTGATTTGATCCTCACAATAGGATCAAATCTCCAGATTTGACTTGTTTCTCCCCATTGGCAGATGAGGAAACTGTGGCTGGGAGTGGGGAAGTGACTTATCTAAAACCAGGACAAGTAAGCGGCACAGGCTCCTCCTCCTGTGATTCTTGCCTGGGGCCCAAGCAGCTGGAGATGACTCCACATTGTGCAGGCTGGCTGGGCCACAGCTGAGCGGTCAGCTCCACCTAGCAGACTTTATAAATGGGCAAGCTGGGCTCTGTCGCTCAGTGCCTCCTCCCTATTCCAAACCTTTGCCTGGCTCCTGTAACCCCACAGAGACACCCCTGCTTCCTCTCAGTGGGGGACCTTGCCTCCTGCTCCATGGGGGAAGTGGAGCCCCCTCCGTGGGGATGTCCCAACTTCCAGTCCCTCCAACCTATCAACTTATCTATAGAAACACCTCAAGTACTCTGTGAAATGAAGCAGAGAGTAGAACAAAAAAATGACTGAAATAAATGCATTTCTAACATTATTCATCTTCACCCCCTTTCCCTGGTCCCAGAGGATGAAGCTCACCTTCTGTTGAGAATGGATTCCTCCCCTAGGGCCCCTTGAATCCACTCAGGCCTCTTCTGGGAACTGACTCCTTCAATGAGCCCACTTTTGACTCTGTATTTTTGTCTCCTTCCTTGTCATTGGCTGCTTTTCCTCAGCCTAGAAACAGGCTCAACTTCCTATTCAAATGATACTCTCTACAGTTGCCCCACCTTGAGCTACCACCTCATTTCTTGCCTGTCTCTAGCCCAGCACTTTGAGAGAATTGTCTGTACATCCTCCTGCGTCACCATCAGCCCATTGCAGCCTGCGCATCCTCCTGGGCCAGCAGCAGCCCACTGCAGCCTGCACATCCTCCTGGGCCAGGACCAGCCCTCTGCAGCCTGCACATCCTCCTGGGCCAGGGCCAGCCCTCTGCAGCCTGCACATCCTCCTGGGCCAGGACCAGCCCACTGCAGCCTGCACATCCTCCTGGGCCAGCACCAGCCCACTGCAGCCTGCACATCCTCCTGTGCCAGCATCAGCCCACTGTGGCCTGTGCATCCTCTTGGGCCAGCATCAGCCCACTGCAGCCTGGCTCTGCTCCCCCACCACTCCACTCATCATCTCCTAATTGCCAATTAAAAATACTTTCGGAGACACAGTTGCTGCTGTAGAAAAACAAAAGAGAGGAAAACTAAGAAGCCACCATTCAGAAAGAACTATTGTTAATACTTGGATCATATCCTCAGATCTTTTTCATATATTCTATATATGTGTGCACATGTGTGCACACACAAACTCGGGTGTAGGGGTAAGGAGAAGGGGAGTCAGGGGAGAGAGGGAGAAAGATATTTTT	20	PASS	ClusterIDs=HG2_Ill_Spiral_9:HG2_PB_SVrefine2PB10Xhap12_314:HG2_PB_assemblyticsfalcon_465:HG4_PB_assemblyticsfalcon_439:HG3_PB_assemblyticsfalcon_450:HG2_PB_SVrefine2Falcon1plusDovetail_256:HG4_PB_SVrefine2PBcRDovetail_210:HG3_PB_SVrefine2PBcRDovetail_221:HG3_Ill_SVrefine2DISCOVARDovetail_223:HG2_PB_SVrefine2PBcRplusDovetail_251:HG2_10X_SVrefine210Xhap12_263:HG4_Ill_SVrefine2DISCOVARDovetail_199:HG2_Ill_SVrefine2DISCOVARplusDovetail_232:HG3_PB_SVrefine2Falcon1Dovetail_243:HG4_PB_SVrefine2Falcon1Dovetail_244:HG4_Ill_Spiral_23:HG3_Ill_Spiral_252;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_263:HG2_PB_SVrefine2PBcRplusDovetail_251:HG3_Ill_SVrefine2DISCOVARDovetail_223:HG3_PB_SVrefine2PBcRDovetail_221:HG4_PB_SVrefine2PBcRDovetail_210;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0329341;ClusterMaxSizeDiff=0.0329341;ClusterMaxEditDist=0.0347305;PBcalls=10;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1656;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=1:33652419-33652426;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9982;PctRecOverlap=0.9976;SizeDiff=3;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:13:0:11:./.:0:3:0:4:1/1:0:31:./.:12:179:.:1749:.
chr1	34330485	HG2_10X_SVrefine210Xhap12_267	T	TGAGGAGGGGAACGGAGAGGACGGGAAGGGAAAGAAGGGGAAGGGAGGAGAGGGGAAGGGAGGAGAAGGGAAGGGAGGGGAAGGGAGGGAGAAGGAGTGGGATGGAGGGAGAGAAGGGGGAGGAGGGGGAGGGAGAGGATGGGGAGAGTGAGGAGGGGAGGGGAGGGGAGGGAGAGGAGGGGAAGGGAGGGAGAGGAGGGGGAGAGAGGGGAAGGGAGGGA	20	PASS	ClusterIDs=HG2_PB_pbsv_363:HG4_PB_HySA_502:HG2_PB_PB10Xdip_2098:HG2_PB_PB10Xdip_2097:HG3_PB_HySA_480:HG2_PB_HySA_644:HG4_PB_HySA_501:HG3_PB_pbsv_363:HG4_PB_pbsv_373:HG4_PB_SVrefine2PBcRDovetail_212:HG4_PB_SVrefine2Falcon1Dovetail_245:HG3_PB_SVrefine2PBcRDovetail_223:HG3_PB_SVrefine2Falcon1Dovetail_244:HG2_PB_SVrefine2PB10Xhap12_316:HG2_10X_SVrefine210Xhap12_267:HG2_PB_SVrefine2PBcRplusDovetail_253:HG2_PB_SVrefine2Falcon1plusDovetail_258;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_267:HG2_PB_SVrefine2PB10Xhap12_316:HG3_PB_SVrefine2Falcon1Dovetail_244:HG3_PB_SVrefine2PBcRDovetail_223:HG4_PB_SVrefine2Falcon1Dovetail_245:HG4_PB_SVrefine2PBcRDovetail_212;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0597701;ClusterMaxSizeDiff=0.0597701;ClusterMaxEditDist=0.24186;PBcalls=16;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=220;DistBack=39709;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=116;REFWIDENED=1:34330486-34330601;PctSeqSimilarity=0.9793;PctSizeSimilarity=1;PctRecOverlap=0.7964;SizeDiff=0;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=92;MatchId=121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:20:0:18:1/1:0:11:0:9:1/1:0:8:./.:.:.:.:.:.
chr1	35007068	HG2_PB_SVrefine2PBcRplusDovetail_254	ATTGCCATC	CAATACTCCCAGATTGATCTACAGGGTTAACACAGTCCCTGTCAAAATATCAACTTGCCTTTTTTGCAAAAGTGGAAAAGCCAATCTTCAAATCACATGGAAATTCAAGAGACCTAAAATAGCTAAAACAATCTTTAAAAAGAACAAAGTTGGAAGACTCACATTTCCGGATTTCAAAACTTGCTACAAAATTACAGTGCTATTAAAACAGTGTGGTACTGGCATAAGGACAGACATAAAGATCAATAGAATTGAATTGAAAGTACAGAAATAAACCCTTACATTTGTGGTCAATTGATTTTCAACAAGAGTGCCAAGACAATTCAAGGGAGAAAGAACAATCATTCAACAAATAGAACTAAAACAACTGGATATTCACATGCAAATGAATAAATTTGGACTCCTACCTCATAAAACACAAAAAAAAAACCACCCCAAAATGGATCATAGACATAAATGTAAGTGTTAAAACTCTAAGACAAAAACTAGGAGTAAATCCTTGGAAACTTTGATTAGATAATATTTCCTTCTTTCTGCTTATTTTGGGTTTAATTTGCTTTTATTTTTCTACTTTCTTAAGGTTTTTATATACTGTACCAAAAGCACAAGCAGTAAGAGAAAAAACCTGGCAAATTGGACTACATCAATATTAAAAAATTTATGTTATGAAAAATGTCATCAAGAAAGTGAAACAACAACCCACAGAATGAAAGAAAATATTTACAAATTTTCTATCTAATACAGAACTTGTAACCAGCATGTATTTTTAAAATCTCTTATGAATCAATAATAAAAATACAAATAACCCAATTTTAAAATGGACAAAGGATCTGAATAGACATTTTTCCAAGAGAGATATACAAATGGCCAAGAAGCGCATAAAAAGATGTTCGACATCATTAGTAATCAGGGAAATGCAAATCAA	20	PASS	ClusterIDs=HG3_PB_pbsv_365:HG4_Ill_GATKHCSBGrefine_217:HG3_Ill_GATKHCSBGrefine_189:HG2_Ill_GATKHCSBGrefine_182:HG4_PB_HySA_507:HG2_PB_assemblyticsfalcon_471:HG2_PB_SVrefine2Falcon1plusDovetail_260:HG4_Ill_SVrefine2DISCOVARDovetail_204:HG3_PB_assemblyticsfalcon_456:HG3_PB_SVrefine2PBcRDovetail_224:HG3_PB_SVrefine2Falcon1Dovetail_245:HG3_Ill_SVrefine2DISCOVARDovetail_228:HG2_PB_SVrefine2PBcRplusDovetail_254:HG2_Ill_SVrefine2DISCOVARplusDovetail_238:HG2_10X_SVrefine210Xhap12_269:HG4_PB_assemblyticsfalcon_446:HG4_PB_SVrefine2Falcon1Dovetail_246:HG4_PB_SVrefine2PBcRDovetail_214:HG2_PB_SVrefine2PB10Xhap12_317:HG2_PB_PB10Xdip_2103:HG2_PB_PB10Xdip_2102:HG4_Ill_MetaSV_79:HG3_Ill_MetaSV_76:HG2_Ill_MetaSV_71:HG2_PB_pbsv_366:HG4_PB_pbsv_375;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_269:HG2_Ill_SVrefine2DISCOVARplusDovetail_238:HG2_PB_SVrefine2PBcRplusDovetail_254:HG3_Ill_SVrefine2DISCOVARDovetail_228:HG3_PB_SVrefine2Falcon1Dovetail_245:HG3_PB_SVrefine2PBcRDovetail_224:HG3_PB_assemblyticsfalcon_456:HG4_Ill_SVrefine2DISCOVARDovetail_204;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0865279;ClusterMaxSizeDiff=0.0832421;ClusterMaxEditDist=0.187699;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=916;DistBack=0;DistForward=18617;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:35007077-35007067;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9978;PctRecOverlap=0.9892;SizeDiff=2;StartDistance=1;EndDistance=9;GTMatch=0;TruScore=99;MatchId=122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:3:38:0:19:1/1:0:15:0:22:1/1:0:37:0/1:23:147:.:.:.
chr1	35304941	HG4_Ill_GATKHC_456	A	AAAGAGAAGAGAAGAGAAGAGAAGAAGAGAACAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	20	PASS	ClusterIDs=HG4_PB_HySA_512:HG4_Ill_svaba_354:HG4_PB_pbsv_379:HG4_Ill_manta_65:HG2_PB_pbsv_370:HG4_Ill_Krunchall_344:HG2_PB_HySA_652:HG4_Ill_GATKHC_456:HG4_Ill_GATKHCSBGrefine_220:HG4_Ill_FB_221:HG2_Ill_svaba_348:HG2_Ill_scalpel_257:HG2_Ill_manta_64:HG2_Ill_Krunchall_327:HG2_Ill_GATKHC_437:HG2_Ill_GATKHCSBGrefine_183:HG2_Ill_250bpfermikitraw_348:HG2_Ill_breakscan11_2968;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_348:HG2_Ill_GATKHCSBGrefine_183:HG2_Ill_GATKHC_437:HG2_Ill_Krunchall_327:HG2_Ill_manta_64:HG2_Ill_scalpel_257:HG2_Ill_svaba_348:HG4_Ill_FB_221:HG4_Ill_GATKHCSBGrefine_220:HG4_Ill_GATKHC_456:HG4_Ill_Krunchall_344:HG4_Ill_manta_65:HG4_Ill_svaba_354;NumExactMatchSVs=13;ClusterMaxShiftDist=0.09375;ClusterMaxSizeDiff=0.075188;ClusterMaxEditDist=0.320611;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=36911;DistForward=66675;DistMin=36911;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=115;REFWIDENED=1:35304862-35304976;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=123.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:26:0|1:14:1:7:25:1|0:1:16:10:0:0/1:17:12:./.:.:.:.:.:.
chr1	36676327	HG2_PB_SVrefine2PB10Xhap12_324	T	TATATCATATATATATATCATATATATATCATATATATATATCATATATATATATAATATATATATCATATATATATCATATATATATATATAATATATATATATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_385:HG2_PB_assemblyticsfalcon_480:HG4_PB_assemblyticsfalcon_457:HG2_PB_SVrefine2Falcon1plusDovetail_265:HG4_Ill_SVrefine2DISCOVARDovetail_218:HG3_Ill_Spiral_264:HG3_PB_SVrefine2PBcRDovetail_230:HG2_Ill_MetaSV_74:HG2_PB_SVrefine2PB10Xhap12_324:HG4_PB_SVrefine2PBcRDovetail_219:HG4_PB_SVrefine2Falcon1Dovetail_251:HG4_Ill_MetaSV_81:HG3_PB_pbsv_372:HG2_PB_PB10Xdip_2149:HG2_PB_PB10Xdip_2148:HG2_PB_HySA_660:HG2_PB_pbsv_374:HG4_PB_HySA_520:HG3_Ill_SVrefine2DISCOVARDovetail_239:HG2_Ill_SVrefine2DISCOVARplusDovetail_247:HG2_10X_SVrefine210Xhap12_280:HG2_PB_SVrefine2PB10Xhap12_323:HG2_PB_SVrefine2PBcRplusDovetail_260;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_324:HG4_Ill_SVrefine2DISCOVARDovetail_218;NumExactMatchSVs=2;ClusterMaxShiftDist=0.290323;ClusterMaxSizeDiff=0.290323;ClusterMaxEditDist=0.306452;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=107;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=1:36676305-36676347;PctSeqSimilarity=0.9918;PctSizeSimilarity=1;PctRecOverlap=0.8692;SizeDiff=0;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=95;MatchId=124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:30:1/1:1:12:0:16:1/1:0:17:0:6:1/1:0:11:./.:.:.:.:.:.
chr1	37215795	HG3_PB_HySA_504	T	TATAAAAAATTAAATTTAGGCCGGGCGCCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_2166:HG2_PB_assemblyticsfalcon_493:HG2_PB_pbsv_384:HG3_PB_pbsv_383:HG4_PB_SVrefine2Falcon1Dovetail_258:HG2_PB_SVrefine2PB10Xhap12_330:HG3_PB_HySA_504:HG2_PB_SVrefine2PBcRplusDovetail_265:HG3_Ill_MetaSV_81:HG3_PB_SVrefine2PBcRDovetail_237:HG2_PB_SVrefine2Falcon1plusDovetail_270:HG3_PB_SVrefine2Falcon1Dovetail_256:HG2_Ill_breakscan11_2969;NumClusterSVs=13;ExactMatchIDs=HG3_PB_HySA_504;NumExactMatchSVs=1;ClusterMaxShiftDist=0.171254;ClusterMaxSizeDiff=0.171254;ClusterMaxEditDist=0.204893;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=345;DistBack=4111;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:37215796-37215796;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9913;PctRecOverlap=0.9942;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=125.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:48:./.:16:29:14:17:./.:16:0:0:3:0/1:35:8:0/1:10:32:.:.:.
chr1	37259206	HG2_PB_SVrefine2PBcRplusDovetail_266	A	AGATGGATTGATGGGTGGATGGATGGATGGGTGGATCAATGGGTGGGTAGATGGATAAATGGATGAATGGGTGGATGGATGGGTGGTGGATGGATGGATAGGTGGATGGATGGATGGGTGGATGGATAGGTGGATGGATGGATGGGTGGGTGCTTGGATGGATGGGTGGGTGCATGGATGGATGGATAAAAGGGGGGATGGATGGATGGGTGGATGGTTGGGTGGATGGATGGATCGATGGATGGATGGATGGATGGTTGGGTGGATGGATGGATCGGTGGATGGATGGATGGATGGATGGGTGGGTGGACGGATGGATCGGTGGATGGATGAATGGGTGGATGGATGGATGGATGGGTGGATGGATGGATGGGTGGATGGACGGATGGATGGATGGGTGGACAGATGGATGGGTGGGTTGATGGATGGATGGGTGGATGGATGGATGGATGGATGGGTGGATGGGTGGATGGATGGATGGATGGGTGGATGGATGGAGGGGTGGATGGATGGATGGATGGGTGGGTGGATGAATGGGTGGTTGGATGGATGGATGGATGGATGGGTGGATGGGTAGATGGATGGATGGGTGGGTGGATGGATGGCTGGGTGGATGGGTGGATGGATGGATGGGTGGGTGGATGGATGGCTGGGTGGATGGATGGGTGGATGGATGGATGGATGGATGGATGAATGGGTGGATGGATGGATGGATGGATGGATGGGTGGATGGGTGGATGGATGGATGGGTGGGTGGATGGATGGATGGGTTGGTGGATG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_238:HG2_PB_pbsv_385:HG2_Ill_breakscan11_2970:HG4_PB_pbsv_397:HG2_PB_PB10Xdip_2168:HG2_PB_PB10Xdip_2167:HG3_PB_pbsv_384:HG2_PB_SVrefine2Falcon1plusDovetail_271:HG3_PB_SVrefine2Falcon1Dovetail_257:HG4_PB_SVrefine2Falcon1Dovetail_259:HG2_PB_SVrefine2PBcRplusDovetail_266:HG2_PB_SVrefine2PB10Xhap12_331:HG4_PB_SVrefine2PBcRDovetail_225;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_331:HG2_PB_SVrefine2PBcRplusDovetail_266:HG4_PB_SVrefine2Falcon1Dovetail_259;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0630517;ClusterMaxSizeDiff=0.0630517;ClusterMaxEditDist=0.230099;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=779;DistBack=34896;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=302;REFWIDENED=1:37259207-37259508;PctSeqSimilarity=0.9779;PctSizeSimilarity=0.9987;PctRecOverlap=0.7209;SizeDiff=-1;StartDistance=-217;EndDistance=-217;GTMatch=0;TruScore=89;MatchId=126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:1/1:0:7:1:8:1/1:1:27:1:21:./.:0:4:./.:4:75:.:.:.
chr1	38241393	HG4_PB_pbsv_407	T	TTTTATTTTGTTTTTTTTTTTGTTTTGTTTTTTTTTTTAATTTATTTTTTATTGATAATTCTTGGGTGTTTTTCTCACAGAGCGGGGATTTGGCAGGGTCATTGGGACAATAGTGGAGGGGAAGGTCAGCAGATAAAACATTGGAACAAAAGGGTCTCTGCGTTTTCCTAGGCAGAGGACCTGCGGCGCTTCCGCAGCTGTTTGTGTCCCTTGATTACTTGAGATTAGATTGGTGATGGACTCTAACGAAGCATGCTGCCTTCGAAGCAAATCGGTATAACACAACGCACATGCTTGCACCGCCTTAATCCATTAACCCGGAAGTGGGACACAGCACCATGTTTTCAGAGAGCACAGGGTGGGTAAGGTCACAGATCAACAGGATCCAAAGGCAGAGGAATTTTTCTGTAGTGCAAACAAAATGAAAGTCTCCCATGTCTACTTTCTTTCTACCCCAGAACGGCAACCATCCGATTTCTCAATCTTTTCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCAATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTTCCCAGACGGGTTGGTGGCCGGGCGAGGAGGCTCCTCACTTGCCCAGTAGGGGGCGGGACCGGCAGAGGCGCCCCTCACCTTCCCGGACGGGCGGGCTGACCGGGCAGGGGGGGCCGACCCCCCCACCTCCTCCCGGACGGGCGGCTGGCCGGGCAGGGGGGCCGACCCCCCACCTCCCTCCCGGACGGGGCGGTGGCCGGGGGGGGTCCGACCCCCCCACCTCCCTTCCCGACGCGGCGGTGGACCGGCAGAGGGGTCTCCTCACTTCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCCTCACCTCCGGACAGGGCGGCTGGCTGGCGCGGGGGCTGGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGTCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCGGACGGGTGGCGCTGGCCCGGGAGAGGGTCATCCTCACTTCCCAGTAGGGCGGCGGAGCAGAGCGCCCATCACCCTCGCGGACGGGCGGGCTGGCGGGCAGGGGGGCCGACCCCCCCCCACCTTCAACTCCGACGGGGCGCTGGGCGGGGCGGGGGGCGACCCCCCCACCTCCCTCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCGGACGGGGGCTGAGCCGGCAGAGGGGCTCCCCCTTTTTTTTTTTTCAAAAACTTTTTCCCCCCCAAGTTTTTTTTTTTAAGGGGGGCCGGGCGGGCAGAGGCGCCCTTCACCTCCCGGACAGGCGGCTGGCTGGGCGGGTGGGGCTGACCCCCCCACCTCCCTCCCGGGACGGGCGCTGGCCGGGTGGGGGGCTGACCCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGGCCGGGCTGAGGGGCTCTCACTTCCCAATTAGGGCGGCCGGGCAGAGGCGCCCTCACCTCCCGGACGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCTCCCGGATGCACGGCTGGCCAGGCGAGGGGCTACCCCCCACCATCCCTCCCGGATTGGCACGGCTGGCCGGGCGGGGCTGCCCCCCACCTCCCTCCCGTATGGGGGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTTCCCGGAACGGGGTGGCTGCCGGGGCGGAGACGCTCCTCCACTTCCCAGATTGGGGTGGCTGCCGGGCGGAAGAGGCTCCTCACTCTCAGACGGGGTGTTGCCAGGCAGAGGGATTCCTCACTTCTCAGACGGGGCGGCCGGGCAAGAGACGCTCCTCACCTTCCAGACGGGTTCTCGGCGGGCAGAGGCAGCTCCTCACATCCCAGATGGGCGGCGGGCAGAGGCGTCCCCACATCTCAGACGGGCGGCCAGGCAGAGACGCTTCCTCCAACTTCCTAGATTGATGCGGCTGGAAGAGGCGCTCCCTCACTTCCTAGATTGGGATGGCGGGCCGGGCGGAGACGCTCCTCATTGCCAGACTGGGAGCCCAGGCAGAGGGGCTCCTCCACATCCCAGACGTATATGGGCGGCCAGGCAGAGGACACTCCTCAACTTCCCAGACGGGGTGGCAGCCGCGGGCAGAGCTGCAATCTCGGCACTGTTGGAGGCCAAGGCAGGCGGCTGCCTCCTTAGCCTCGGGCCCCGCGGGCCCGTCCGCCTCCTCAGCGCTGCCTCCCGGGCGGCGCTCGCCGGCGCGCGCAAAGACTCTATTTAATTCTTTATTTAGAGATTGGAGTCTCACTCTGTCGAACAGCTGGAATGCAGTGGTACCAATCTCGGCTCACTACAAACCTCCGATCCCTGGTTGCAAGTTGATTCTCCTGCCTCAGGCCTCCCAATTAGCTGGGGAATTACAGCACGCCACATGCTGGCTATTATTTTGTTATTTTTTAGTAGAGACGCGGGTTTCACCATGTTCCAATGGG	20	PASS	ClusterIDs=HG3_PB_HySA_513:HG2_PB_PB10Xdip_2185:HG2_PB_pbsv_395:HG3_PB_HySA_515:HG4_PB_pbsv_407:HG2_PB_SVrefine2PB10Xhap12_341:HG3_PB_assemblyticsfalcon_484:HG4_PB_assemblyticsfalcon_481:HG2_PB_SVrefine2PBcRplusDovetail_272:HG4_PB_SVrefine2PBcRDovetail_231:HG3_PB_SVrefine2Falcon1Dovetail_262:HG4_PB_SVrefine2Falcon1Dovetail_265:HG2_PB_SVrefine2Falcon1plusDovetail_277:HG4_PB_HySA_537:HG2_PB_HySA_687:HG2_Ill_breakscan11_2972;NumClusterSVs=16;ExactMatchIDs=HG4_PB_pbsv_407;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147414;ClusterMaxSizeDiff=0.147414;ClusterMaxEditDist=0.251293;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=2481;DistBack=8;DistForward=40799;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=1:38241389-38241397;PctSeqSimilarity=0.9442;PctSizeSimilarity=0.9855;PctRecOverlap=0.9855;SizeDiff=36;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=97;MatchId=128.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:56:./.:18:17:14:20:./.:3:15:32:0:0/1:26:18:0/1:80:58:.:2532:.
chr1	38432765	HG2_PB_SVrefine2PB10Xhap12_342	T	TAAAAATAGAAAAATTAGACCGGGCGCGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCGAGACGGGTGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCTCGTCTCTACTAAAAATACAAAAAAAATAGCTGGGCGTGGTGGCGGGCGCCTGCAGTCCCAGCTACTCGGGAATGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCGTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGGACAGAGCGACACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_408:HG4_PB_HySA_539:HG2_PB_pbsv_396:HG4_PB_SVrefine2Falcon1Dovetail_266:HG3_PB_pbsv_395:HG2_PB_PB10Xdip_2187:HG2_PB_PB10Xdip_2186:HG2_PB_HySA_688:HG2_Ill_SVrefine2DISCOVARplusDovetail_260:HG3_Ill_SVrefine2DISCOVARDovetail_255:HG2_PB_SVrefine2PBcRplusDovetail_273:HG2_PB_SVrefine2PB10Xhap12_342:HG4_PB_SVrefine2PBcRDovetail_232:HG4_Ill_SVrefine2DISCOVARDovetail_230:HG3_PB_SVrefine2Falcon1Dovetail_263:HG2_PB_SVrefine2Falcon1plusDovetail_278:HG3_PB_SVrefine2PBcRDovetail_245:HG3_PB_HySA_518;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_342:HG2_PB_SVrefine2PBcRplusDovetail_273;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0958084;ClusterMaxSizeDiff=0.0958084;ClusterMaxEditDist=0.276374;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=4807;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=46;REFWIDENED=1:38432766-38432811;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=0.9817;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:32:1/1:1:13:0:10:./.:0:2:0:4:./.:0:6:1/1:2:40:.:.:.
chr1	38950739	HG2_PB_assemblyticsfalcon_509	T	TCTTTAGTGATGGGGTCTTGCTCTGTCATACAGGCTGGAGTACAGTGGTGCAATCATAGCTCACTGCAGCCTCAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_409:HG2_PB_PB10Xdip_2188:HG3_PB_pbsv_396:HG4_Ill_svaba_375:HG3_Ill_svaba_393:HG2_Ill_svaba_374:HG4_Ill_GATKHCSBGrefine_235:HG2_PB_pbsv_397:HG3_PB_assemblyticsfalcon_487:HG3_Ill_GATKHC_499:HG3_Ill_GATKHCSBGrefine_205:HG2_PB_assemblyticsfalcon_509:HG2_Ill_GATKHCSBGrefine_199:HG3_PB_HySA_522:HG4_PB_HySA_542;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_199:HG2_PB_assemblyticsfalcon_509:HG3_Ill_GATKHCSBGrefine_205:HG3_Ill_GATKHC_499:HG3_PB_assemblyticsfalcon_487:HG4_Ill_GATKHCSBGrefine_235;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0764331;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.316456;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=75;DistBack=-1;DistForward=1643;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=1:38950740-38950741;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:44:1/1:0:25:0:15:1/1:1:25:0:19:1/1:0:21:./.:.:.:.:.:.
chr1	39411360	HG2_10X_SVrefine210Xhap12_294	C	CGCGGTGGCTCACACCTATAATTCCAGCAATTTGGGAGGCCAAGGCGGGCGGATTGCCTGAGCTCAAGAGTTCGAGACCAGCCTGGGCAACATGGCGAAATTCCATCTCTACTAAAAATACAAAAAAAGTTAGCCAGGCTTGGTGGCACACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCACAAGAATCGCTTGAACCTGGGAGGCTGAGGTTGCAGTGAGCTGAGATCGTACCACTGCACTCCAGCCTGGGTGACAGAGTGGGACTCTGTCTCAAAAAAAAAAAAAGAAGGAAAGAAAGAAAAAGAAAAGTCATCTCAGAAAGAATAGATGGCAGCCTGTGGTTGAGTTAGTCTTTCCTGGATCTGGAGAAAGGAAGTGGGGCTCAGCGAAAGCCTGTCTGTGTATTTCACAAATGTGGCTTTTCCTCTACAGATATAAATCTCCTCCACAAAAAAGCAGCTTTTCAGGGCTATTCCTGTCTGCAGGCCCTCTGAATAGCCATATCAAAACAAGTCAAAGAAGTATATTTTGGGGTGAAATATTTTTGGTTTCTTTTCACACCAGCAAGGGCCATGCAGAGTATAGAGCAAGGGAAAATAAGAGGAAAGGCCAGAACCGAGAGCCAAGCACACTGTCCACCACAGGGACAGAGCAGGGAGAAAGGACTCAGATGGCACAAAAGCAACCAAGCACTGGAAGGGACAGAGTAGTAGAAGGAGGAAACTGGGAGGTGCCTGGGGCACTCATGTCGGGCACTGAGGCTTTCTGTAGGGAGCTTATACCTACATATGTATAAGGAAGTTACACCTCATCCACATTTTCTAACTAAAGTAGGTGGCAAGGATACCTGCTACGAGTTAGGAGGAGAGAGACTGGATGGAAGATTGAAGGAAATTGACAACTGCTTAAAAAAAAACAGCTGAGAGGAGAGAAAAGTGACCAAAGCAAGGTAGAAGCTCACAGAGGGATGCCAAGAATCACATCAAAATGGCACAGATCAACAAGCAGGCAAGAATGAGGGACCCTCAAGGAGTGAGAAACTGGGGAAACCAGGTCCTGTCCTGAGTGATATGTTAGTAAGATCAATGCGGCATGGGTGAGAGCCGGGCGAATGCCGCCAGCAATCATTTAGCACCCAGGACTGGAGACAGCTTTCACGTAAGATGAAAAATGTTGACTGGGCGCGGTAGCTCACGCCTGTAATCCCAGCACTTTAGGAGGCCGAGGGGGGTGGATCACGAGGTCAAGAGATCGAGACAAGCCTGGCCAACATGGTGAAATCCCATCTCTACTAAAAATACAAAAAAATTAGCTGGGCGTGGTGGCACGTACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAGATGAAAAATGTCTACAGAATAAAGGTCCTGCTCAGCTATGGAAGTGCAAAGAGTATCAGGAGGCAGTGCTTGGTCGCAGAACTGTACCGGGGTTGTGGTTGGGCCACCTCAACTCTAACATCTAGTTATCCCTGGCTGTCAAAGACACTACTGACTGTTCAGCCCTCCAGCCAGCCTCCCTTGTTGTGATTTGATGCTCAACAAGCTGCTTTCTATGCTGTGTGATTTCAGAGAGAAAAGGTGTCTGCCCACACCCGGTGTACTCACAAGTTAGGGAGCTCTCAGAAAACAAAGCCTTGTGATCTATTCAGAAATAGGAAAATAAAAAAGAAAACAAACCCTATATTTTATTTATCTCAGTGTCTCCAGCACCCAGAACAGGGATTAGCATTAAGTTTGGTTCAAAAAGGTGTTTGCAAAACGTATCTGGAGGAGGCTGATATGCCCTTAAATATTTGTAAATGAATAAATTTTCATTTAAAAGCCAGGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_281:HG4_PB_pbsv_411:HG2_PB_pbsv_401:HG2_PB_PB10Xdip_2198:HG2_PB_PB10Xdip_2197:HG4_Ill_SVrefine2DISCOVARDovetail_232:HG2_PB_SVrefine2PBcRplusDovetail_276:HG2_PB_SVrefine2PB10Xhap12_346:HG2_Ill_SVrefine2DISCOVARplusDovetail_264:HG2_10X_SVrefine210Xhap12_294:HG4_PB_SVrefine2PBcRDovetail_233;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_294:HG2_Ill_SVrefine2DISCOVARplusDovetail_264:HG2_PB_SVrefine2PB10Xhap12_346:HG2_PB_SVrefine2PBcRplusDovetail_276:HG4_Ill_SVrefine2DISCOVARDovetail_232;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0272658;ClusterMaxSizeDiff=0.0242302;ClusterMaxEditDist=0.166625;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=1964;DistBack=32767;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=287;REFWIDENED=1:39411361-39411647;PctSeqSimilarity=0.9929;PctSizeSimilarity=0.9995;PctRecOverlap=0.9191;SizeDiff=1;StartDistance=-158;EndDistance=-158;GTMatch=0;TruScore=97;MatchId=132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:2:15:1:22:./.:0:2:0:3:1/1:0:24:1/1:14:291:.:2086:.
chr1	39510229	HG2_Ill_SVrefine2DISCOVARplusDovetail_266	A	AGGAGGAGGAGGAGAAGAAGAAGAGGAAAAGGAGGGGGAGGAGAAGGGGAGGGGGAGGAAAGAGGAGGAGAAGAAAGAAGAAGGAGAAGGAAGAAAGGAGGGAGGAGGAGGAGGAGAAGGGGGAGGGGGAGGAAGGAGGAGGAGAAGAATGAGAAGGAGAAGAAGAAGGAAGAAGAAGAAAGAAGGAAGAAGAAGGAGGAGGAGGAGGGGGAGGAGGG	20	PASS	ClusterIDs=HG3_PB_pbsv_398:HG2_PB_PB10Xdip_2200:HG2_PB_pbsv_402:HG2_PB_PB10Xdip_2199:HG2_PB_HySA_694:HG3_PB_HySA_527:HG3_Ill_MetaSV_88:HG4_Ill_GATKHCSBGrefine_236:HG2_Ill_MetaSV_81:HG4_Ill_MetaSV_86:HG4_PB_HySA_548:HG3_PB_HySA_526:HG4_PB_SVrefine2PBcRDovetail_234:HG2_PB_SVrefine2PB10Xhap12_347:HG2_PB_SVrefine2PBcRplusDovetail_277:HG2_Ill_SVrefine2DISCOVARplusDovetail_266:HG2_10X_SVrefine210Xhap12_295:HG2_PB_SVrefine2Falcon1plusDovetail_282:HG3_PB_SVrefine2PBcRDovetail_248:HG4_PB_HySA_547:HG4_PB_pbsv_412;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_295:HG2_Ill_SVrefine2DISCOVARplusDovetail_266:HG2_PB_SVrefine2PBcRplusDovetail_277;NumExactMatchSVs=3;ClusterMaxShiftDist=0.105991;ClusterMaxSizeDiff=0.101382;ClusterMaxEditDist=0.241135;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=217;DistBack=19620;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=24;REFWIDENED=1:39510230-39510253;PctSeqSimilarity=0.9978;PctSizeSimilarity=1;PctRecOverlap=0.9724;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:32:1/1:0:18:0:13:1/1:1:14:0:31:./.:0:8:./.:.:.:.:.:.
chr1	39677662	HG2_Ill_GATKHCSBGrefine_200	T	TAATAGTGGGTGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_399:HG2_PB_HySA_696:HG3_Ill_MetaSV_89:HG3_Ill_GATKHCSBGrefine_206:HG2_Ill_GATKHCSBGrefine_200;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_200:HG3_Ill_GATKHCSBGrefine_206:HG3_Ill_MetaSV_89;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0860215;ClusterMaxSizeDiff=0.0829493;ClusterMaxEditDist=0.178187;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=2;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:39677663-39677675;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=134.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:21:./.:8:10:4:7:0|1:18:0:0:6:0/1:25:18:0/1:12:37:.:.:.
chr1	40516077	HG2_Ill_SpiralSDKrefine_276	T	TGAAATATCTTCTGTAGTCTGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTGGCTCACCGCAATTACAGGCATGAGCCACCGTGCCCAGACTACAGAAGATATTTCAAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2973:HG4_PB_pbsv_418:HG2_PB_pbsv_408:HG3_PB_pbsv_404:HG2_PB_PB10Xdip_2249:HG2_PB_assemblyticsfalcon_524:HG2_PB_PB10Xdip_2248:HG3_PB_HySA_532:HG4_PB_SVrefine2PBcRDovetail_237:HG4_PB_SVrefine2Falcon1Dovetail_271:HG4_Ill_manta_71:HG4_Ill_SVrefine2DISCOVARDovetail_240:HG4_Ill_MetaSV_88:HG4_Ill_GATKHCSBGrefine_241:HG3_PB_SVrefine2PBcRDovetail_250:HG3_PB_SVrefine2Falcon1Dovetail_264:HG3_Ill_manta_61:HG3_Ill_Spiral_287:HG3_Ill_SVrefine2DISCOVARDovetail_266:HG3_Ill_MetaSV_90:HG3_Ill_GATKHCSBGrefine_209:HG3_Ill_250bpfermikitraw_377:HG2_PB_SVrefine2PBcRplusDovetail_282:HG2_PB_SVrefine2PB10Xhap12_354:HG2_PB_SVrefine2Falcon1plusDovetail_285:HG2_Ill_manta_72:HG2_Ill_SpiralSDKrefine_276:HG2_Ill_SVrefine2DISCOVARplusDovetail_274:HG2_Ill_MetaSV_85:HG2_Ill_GATKHCSBGrefine_203;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_203:HG2_Ill_MetaSV_85:HG2_Ill_SVrefine2DISCOVARplusDovetail_274:HG2_Ill_SpiralSDKrefine_276:HG2_Ill_manta_72:HG2_PB_SVrefine2Falcon1plusDovetail_285:HG2_PB_SVrefine2PB10Xhap12_354:HG2_PB_SVrefine2PBcRplusDovetail_282:HG3_Ill_250bpfermikitraw_377:HG3_Ill_GATKHCSBGrefine_209:HG3_Ill_MetaSV_90:HG3_Ill_SVrefine2DISCOVARDovetail_266:HG3_Ill_Spiral_287:HG3_Ill_manta_61:HG3_PB_SVrefine2Falcon1Dovetail_264:HG3_PB_SVrefine2PBcRDovetail_250:HG4_Ill_GATKHCSBGrefine_241:HG4_Ill_MetaSV_88:HG4_Ill_SVrefine2DISCOVARDovetail_240:HG4_Ill_manta_71:HG4_PB_SVrefine2Falcon1Dovetail_271:HG4_PB_SVrefine2PBcRDovetail_237;NumExactMatchSVs=22;ClusterMaxShiftDist=0.198198;ClusterMaxSizeDiff=0.198198;ClusterMaxEditDist=0.255708;PBcalls=14;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=113;DistBack=1226;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=1:40516078-40516087;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=136.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:0:23:1:23:./.:9:14:8:18:0/1:15:43:./.:.:.:.:.:.
chr1	40524688	HG2_PB_assemblyticsfalcon_525	GCAAATTCTAACTT	TTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGCCCGCCACGACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2974:HG4_PB_pbsv_419:HG2_PB_pbsv_409:HG2_PB_assemblyticsfalcon_525:HG2_PB_HySA_706:HG2_PB_SVrefine2Falcon1plusDovetail_286:HG2_PB_SVrefine2PB10Xhap12_355:HG2_PB_PB10Xdip_2250:HG4_PB_HySA_554;NumClusterSVs=9;ExactMatchIDs=HG2_PB_assemblyticsfalcon_525;NumExactMatchSVs=1;ClusterMaxShiftDist=0.275492;ClusterMaxSizeDiff=0.275492;ClusterMaxEditDist=0.286225;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=276;DistBack=8601;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:40524702-40524687;PctSeqSimilarity=0.9481;PctSizeSimilarity=0.8961;PctRecOverlap=0.9385;SizeDiff=-32;StartDistance=2;EndDistance=15;GTMatch=0;TruScore=92;MatchId=137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:32:0|1:29:1:0:28:./.:3:6:36:0:0/1:42:6:./.:.:.:.:.:.
chr1	41835543	HG2_Ill_150bpfermikitraw_340	G	GAGGGCTGCCCTGGGCTCCTGCAGTCCCTTGGCAAGGGGACAGAGAGCCCAGGGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_253:HG4_PB_pbsv_422:HG2_PB_pbsv_411:HG2_PB_HySA_716:HG4_Ill_svaba_396:HG4_Ill_manta_73:HG4_Ill_Krunchall_381:HG4_Ill_GATKHC_503:HG4_Ill_GATKHCSBGrefine_247:HG4_Ill_FB_250:HG4_Ill_Cortex_53:HG4_Ill_250bpfermikitraw_387:HG4_Ill_150bpfermikitraw_367:HG3_Ill_svaba_420:HG3_Ill_scalpel_322:HG3_Ill_manta_62:HG3_Ill_Spiral_297:HG3_Ill_Krunchall_381:HG3_Ill_GATKHC_527:HG3_Ill_GATKHCSBGrefine_215:HG3_Ill_FB_261:HG3_Ill_Cortex_65:HG3_Ill_250bpfermikitraw_391:HG3_Ill_150bpfermikitraw_358:HG2_PB_assemblyticsfalcon_533:HG2_Ill_svaba_397:HG2_Ill_scalpel_299:HG2_Ill_manta_73:HG2_Ill_Krunchall_372:HG2_Ill_GATKHC_493:HG2_Ill_GATKHCSBGrefine_205:HG2_Ill_FB_259:HG2_Ill_Cortex_106:HG2_Ill_250bpfermikitraw_392:HG2_Ill_150bpfermikitraw_340:HG4_PB_HySA_560:HG3_PB_HySA_537:HG2_PB_PB10Xdip_2254:HG2_PB_PB10Xdip_2253:HG3_PB_pbsv_407;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_340:HG2_Ill_250bpfermikitraw_392:HG2_Ill_Cortex_106:HG2_Ill_FB_259:HG2_Ill_GATKHCSBGrefine_205:HG2_Ill_GATKHC_493:HG2_Ill_Krunchall_372:HG2_Ill_manta_73:HG2_Ill_scalpel_299:HG2_Ill_svaba_397:HG2_PB_assemblyticsfalcon_533:HG3_Ill_150bpfermikitraw_358:HG3_Ill_250bpfermikitraw_391:HG3_Ill_Cortex_65:HG3_Ill_FB_261:HG3_Ill_GATKHCSBGrefine_215:HG3_Ill_GATKHC_527:HG3_Ill_Krunchall_381:HG3_Ill_Spiral_297:HG3_Ill_manta_62:HG3_Ill_scalpel_322:HG3_Ill_svaba_420:HG4_Ill_150bpfermikitraw_367:HG4_Ill_250bpfermikitraw_387:HG4_Ill_Cortex_53:HG4_Ill_FB_250:HG4_Ill_GATKHCSBGrefine_247:HG4_Ill_GATKHC_503:HG4_Ill_Krunchall_381:HG4_Ill_manta_73:HG4_Ill_svaba_396;NumExactMatchSVs=31;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.272727;PBcalls=10;Illcalls=30;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=30;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=14;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=40432;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=1:41835540-41835545;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:37:1/1:1:21:1:18:1/1:0:31:0:29:1/1:0:57:./.:.:.:.:.:.
chr1	41890921	HG3_Ill_GATKHCSBGrefine_217	G	GGTGTGGTGTGTGTGTGCGCCTGTGTGGTGTGTGTGTGTGTTGTGTGCATGTGTGTGGTGTGGTGTCAACACTGGACAGTATGGTACAGGCACCTCCTGAAGTCTAATGCGGAAGGCCCTTAGCAACCTTATGTCCCAGATGAAGAAAGGGTTTGGGGAGGTGGTGTGACTTATCCAAGGTCACACAGTCACCCAAGAAACGGCCCCCAGGATTCAGACCCAATCTGCTGACTCCCAAACCTGCGTTTGATTTATTGATTTAGATTTGTACAAGTTTCTATACACAGCATTAATTTATATTTATTTATGCATTTAGAATAAGCCCAACTTGTGTTTAAAATCTCTCTGCTTCCCAGATTCTCAGTGAGGTGAGCAGGCCCAGGCTCAGTGGCCTCAAAGTCAGGTTACAGAGAGCAATGGGGGCGTAACCTGGTCACACTGGAGTTCTGGAAAGATCCCTTTGACAGCCAGTGGGGCGTAAAT	20	PASS	ClusterIDs=HG4_PB_pbsv_424:HG2_PB_assemblyticsfalcon_535:HG2_PB_PB10Xdip_2258:HG2_PB_PB10Xdip_2257:HG2_Ill_breakscan11_2976:HG2_PB_HySA_717:HG2_PB_SVrefine2Falcon1plusDovetail_289:HG4_PB_SVrefine2Falcon1Dovetail_274:HG4_PB_SVrefine2PBcRDovetail_241:HG4_Ill_SVrefine2DISCOVARDovetail_246:HG4_Ill_MetaSV_91:HG4_Ill_GATKHCSBGrefine_249:HG3_PB_SVrefine2PBcRDovetail_255:HG3_Ill_SVrefine2DISCOVARDovetail_271:HG3_Ill_MetaSV_94:HG3_Ill_GATKHCSBGrefine_217:HG2_PB_SVrefine2PBcRplusDovetail_285:HG2_PB_SVrefine2PB10Xhap12_359:HG2_Ill_GATKHCSBGrefine_207:HG3_PB_SVrefine2Falcon1Dovetail_267:HG2_Ill_MetaSV_87:HG4_PB_HySA_561:HG3_PB_pbsv_409:HG2_PB_pbsv_413;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_207:HG2_PB_SVrefine2PB10Xhap12_359:HG2_PB_SVrefine2PBcRplusDovetail_285:HG3_Ill_GATKHCSBGrefine_217:HG3_Ill_MetaSV_94:HG3_Ill_SVrefine2DISCOVARDovetail_271:HG3_PB_SVrefine2PBcRDovetail_255:HG4_Ill_GATKHCSBGrefine_249:HG4_Ill_MetaSV_91:HG4_Ill_SVrefine2DISCOVARDovetail_246:HG4_PB_SVrefine2PBcRDovetail_241;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0946626;ClusterMaxSizeDiff=0.0946626;ClusterMaxEditDist=0.256663;PBcalls=15;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=482;DistBack=29730;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=1:41890922-41890923;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:33:1/1:1:18:2:17:./.:30:295:21:131:./.:0:6:1/1:0:55:.:.:.
chr1	42010235	HG3_PB_SVrefine2Falcon1Dovetail_269	G	GCACCACGACCACCTCTACCACCATCACTACCATCACCACCACCATCAACACCACACTATCATCGCTACTACCATCACCACCACCACTACCACCACTACTACCACCACCACCACCTCTACCACCACTGCTACCATCACCACCACCACCACTACCACCTGTACCACCACCGCTACCATCACCACCACTACCACCACCATCACCACCACTACCACTACCTCTACCTCCACTGCTACCATCACCACCACCACTACCACCTCTACCACCACCATCACCACCACCACTACCACCACCACCACCACCACCACCACCACTACCACCTCTACCACCTCTACCACCACCACCACCACTACCACCTCTACCACCACCATCATCACCACCACCACCATCACCTCTACCACCACCATCACCACCACCACCACCATCACCACCATCATCACCACCACCACTACCACCTCTACCACCACCATCACCACCACCACTATCACCACCTCTACCACCACCATCACCACCACCACCACCATCACCTCTACCACCACCATCACCACCACCACCACCATCACCACCATCACCACCACCACCACCATCACACCACTACCACCACCATCACCACCACCACTATCACCACCTCTACCACCACCATCACCACCACCACCACACCTCTACCACCACCATCACCACCACCACCACCACCACTCTACCACCACCACCACCACCACCACCACTACCACCTCTACCACCTCTACCACCACCACCACCACTACCACCTCTACCACCACCATCACCACCACCACTATCACCACCTCTACCACCACCATCACCACCACCACCACCATCACCTCTACCACCACCATCACCACCACCACCACCATCACCACCATCATCACCACCACCATACCACCTCTACCACCACCATCACCACCACCACTATCACCACCTCTACTACCACCATCACCACCACCACCACCATCACCTCTACCACCACCATCACCACCACCACCACCATCACCACCATCACCACCACCACCACCATCACCACCACTACCACCTCTACCACCACCATCACCACCACCACTACCACCACCACCACCACCACCACCACCACTACCACCACTACCACCTCTACCACCACCATCACCACCACCACCACTACCACCACTACCACCTCTACCACCACCATCACCACCATCACCACCACCACCACCATCACCACCACTACCACCTCTACCACCACCATCACCACCACCACTACCACCACCACCACCACCACCACCACCACTACCACCACTACCACCTCTACCACCACCATCACCACCACCACCACTACCACCTCTACCACCACCATCACCACCAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_269:HG2_PB_SVrefine2PB10Xhap12_361:HG2_PB_SVrefine2PBcRplusDovetail_287:HG4_PB_SVrefine2Falcon1Dovetail_276:HG3_PB_SVrefine2PBcRDovetail_256;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_269;NumExactMatchSVs=1;ClusterMaxShiftDist=0.121616;ClusterMaxSizeDiff=0.121616;ClusterMaxEditDist=0.138093;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1351;DistBack=13301;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1260;REFWIDENED=1:42010236-42011495;PctSeqSimilarity=0.9731;PctSizeSimilarity=0.9854;PctRecOverlap=0.7257;SizeDiff=-20;StartDistance=-366;EndDistance=-366;GTMatch=1;TruScore=89;MatchId=140.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:0:9:0:12:./.:18:35:3:11:0/1:7:4:1/1:6:170:.:1489:.
chr1	42483960	HG2_PB_pbsv_416	T	TAAGAAATGTTTAAACATTACACAGAAGGACTAACCTAAGCCAAAAAGAACAAAGCTGGAGGCATCAACACTACCTTTACTTTCAACTATACTACAAGGCACAGTAACCAAAACAGCATGGTAACTGGTACCAAACAGAGATATAGATCAATGGAACAGAACAGGCCCCAGAAATAATCCGCAATATTCTACAACTATCTGATCTTTGAAACAAACCTGAGAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAAGGTGCTGGGAAAACTGGCTAGCCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTAACACCTTATACAAAATCAATTCAAGACTGATTAAAGATTTAAGCGTTAAACCTAAACACCAATAAAAACGCCTAGAAGAAAACCTAGGCATTACCATTCAGGACCATACGGCCGTGGGCAAGGACTTCATGTCCAAACACCAAAAGCAATGGCAAACAAAAGACAAAATTGGACAATGGGATCTAATTAAACGTAAAGAGCTTTCTGCACAAGCAAAAGAAACTCCATCAGAGTGAACAGGCAACCTACAACATGGAGAAAATTTTGCAACCTTACTTCATGCTGACAAAGGGCTTAATTATCCAGGAACTACAATGAACTAAAACAAATTTACAAGAAAAAAATCAAAACAACCCATCAAAAAGTGGGCGAAGGAACATGAACAGGACACTTCTCAAAAGAAGACATTTATGCAAGCCAAAAAACAACATGAAAAGAATGCACTCATCATCACTGGCCATCAAGAAAATCAAAATCACACAAACCACTATGAGATATCATCTCACACCATTTAGAATGGCAAATCATTAAAAAGTCAGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAAACACTTTACACTGTTGCGTGGGACTGTAAACTAGTTCAACCATTTGTGGAAGTCAGTGTGGCGATTCCTCAGGATCTAGAACTAGAAATACCATTGACCCAGCCATCCCATTACTGGGGTTTATACCCCCCCAAATGAAGTATAATCCATGCTGCTTATAATGACACATGCAAACGTGTTTAATTGCGGCGATCTATTCACAATAGAAGACTTGAACCAACCCAATGTCCAACAATGATAGACTGGAATTAAGAAAGTGGCACATATACCCATGGAAATACTATTGCAGCCATCAAAAAATGATTTGAGTTCATATCCTTTGTAGGACATGGATGAAATTGGAAACCATCATTCTCAGTAACCTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATCAGGTGGGAACTTGAACAAATGAAGATCACCATGGACACAGGAATGGGGAATATCACACTCTGGGGACTGGTGGTGGGGTTCGGGGAGGGGGGAGGGGAATAGCATTGGGAGATTACTCAGATGGCTAGATGAACATTAGTGGGTGCAGGCGCACCAGCATGGCACATGTATACATATGTAACTAACTGCACAATGTGCACCTGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_HySA_546:HG3_PB_pbsv_414:HG2_PB_PB10Xdip_2266:HG2_PB_assemblyticsfalcon_544:HG2_PB_HySA_727:HG2_PB_pbsv_416:HG3_PB_SVrefine2Falcon1Dovetail_270:HG2_PB_SVrefine2PBcRplusDovetail_288:HG2_PB_SVrefine2Falcon1plusDovetail_292:HG3_PB_SVrefine2PBcRDovetail_257:HG2_PB_SVrefine2PB10Xhap12_362:HG4_PB_SVrefine2Falcon1Dovetail_277;NumClusterSVs=12;ExactMatchIDs=HG2_PB_pbsv_416;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0799484;ClusterMaxSizeDiff=0.0799484;ClusterMaxEditDist=0.178074;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1546;DistBack=19399;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=1:42483961-42483971;PctSeqSimilarity=0.9581;PctSizeSimilarity=0.9741;PctRecOverlap=0.9741;SizeDiff=40;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:49:1|0:1:34:22:4:./.:30:0:1:18:0/1:30:10:0/1:63:43:.:1484:.
chr1	43188322	HG2_PB_SVrefine2Falcon1plusDovetail_295	C	CCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCTGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGGCAACATGGTAAAACCCCATCTCTACCAAAAATACAAAAATTAGCCAGGCATGGTGGTGGGTG	10	PASS	ClusterIDs=HG4_PB_HySA_580:HG2_PB_pbsv_423:HG2_PB_PB10Xdip_2274:HG3_PB_pbsv_421:HG2_PB_HySA_739:HG4_PB_pbsv_433:HG2_PB_SVrefine2PBcRplusDovetail_292:HG2_PB_SVrefine2Falcon1plusDovetail_295:HG2_PB_SVrefine2PB10Xhap12_369;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_295:HG2_PB_SVrefine2PBcRplusDovetail_292;NumExactMatchSVs=2;ClusterMaxShiftDist=0.124088;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.291667;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=135;DistBack=13523;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=170;REFWIDENED=1:43188323-43188492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:10:27:0|1:13:4:2:24:./.:2:2:1:12:./.:7:0:./.:.:.:.:.:.
chr1	43547026	HG2_Ill_150bpfermikitraw_355	T	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGG	20	PASS	ClusterIDs=HG2_PB_HySA_742:HG4_PB_pbsv_434:HG2_PB_HySA_743:HG2_PB_pbsv_424:HG2_PB_assemblyticsfalcon_557:HG4_Ill_Krunchall_397:HG4_Ill_GATKHC_528:HG4_Ill_GATKHCSBGrefine_256:HG4_Ill_250bpfermikitraw_407:HG2_Ill_Krunchall_390:HG2_Ill_GATKHC_516:HG2_Ill_GATKHCSBGrefine_214:HG2_Ill_250bpfermikitraw_412:HG2_Ill_150bpfermikitraw_355:HG4_PB_HySA_583;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_355:HG2_Ill_250bpfermikitraw_412:HG2_Ill_GATKHCSBGrefine_214:HG2_Ill_GATKHC_516:HG2_Ill_Krunchall_390:HG4_Ill_250bpfermikitraw_407:HG4_Ill_GATKHCSBGrefine_256:HG4_Ill_GATKHC_528:HG4_Ill_Krunchall_397;NumExactMatchSVs=9;ClusterMaxShiftDist=0.152381;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.201835;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=2;DistForward=5250;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:43547027-43547038;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:0|1:24:2:1:23:1|0:0:38:23:0:0/1:17:17:./.:.:.:.:.:.
chr1	45078762	HG2_PB_PB10Xdip_2314	C	CCCCACACCTGTAAGCAGAGGCCACAGAGCATCCATGGATATGCAGGGATGTTTCTAGATTAATAGGGCTCCTCAA	10	PASS	ClusterIDs=HG3_PB_HySA_565:HG2_PB_pbsv_431:HG3_PB_assemblyticsfalcon_530:HG4_PB_HySA_589:HG3_PB_pbsv_431:HG2_PB_PB10Xdip_2315:HG2_PB_PB10Xdip_2314:HG4_PB_pbsv_440:HG4_PB_assemblyticsfalcon_531:HG2_PB_assemblyticsfalcon_566;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_2314:HG2_PB_PB10Xdip_2315;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0641026;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.289308;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=75;DistBack=19;DistForward=90592;DistMin=19;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=464;REFWIDENED=1:45078634-45079097;PctSeqSimilarity=0.9948;PctSizeSimilarity=0.9868;PctRecOverlap=0.7273;SizeDiff=-1;StartDistance=20;EndDistance=20;GTMatch=0;TruScore=90;MatchId=146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:33:1/1:2:14:1:13:./.:0:1:0:0:./.:1:3:./.:.:.:.:.:.
chr1	45342140	HG2_PB_SVrefine2PBcRplusDovetail_298	G	GCAGCCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCCCGCCAGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGCAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCACCCGCCCCGTCCGGGAGGCAAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAATTGAGGAGCCCCTCTGCCCGGCCAGCTGCCCCGTACGGGAGGGAGGTGAGGGGGTCAGCCCCCCGCCCGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_298:HG2_PB_pbsv_433:HG2_PB_HySA_753:HG2_PB_PB10Xdip_2316:HG2_PB_PB10Xdip_2317:HG3_PB_pbsv_435:HG4_PB_pbsv_442:HG2_PB_SVrefine2Falcon1plusDovetail_300:HG4_PB_SVrefine2Falcon1Dovetail_286:HG2_PB_SVrefine2PB10Xhap12_377:HG3_PB_SVrefine2PBcRDovetail_266:HG4_PB_SVrefine2PBcRDovetail_248;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_298:HG4_PB_SVrefine2PBcRDovetail_248;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0326223;ClusterMaxSizeDiff=0.0225847;ClusterMaxEditDist=0.193467;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=399;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=152;REFWIDENED=1:45342141-45342292;PctSeqSimilarity=0.9782;PctSizeSimilarity=1;PctRecOverlap=0.7368;SizeDiff=0;StartDistance=-105;EndDistance=-105;GTMatch=0;TruScore=90;MatchId=147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:27:1:26:./.:0:0:0:0:./.:0:2:1/1:2:31:.:.:.
chr1	46004687	HG2_Ill_GATKHC_533	A	AAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_437:HG2_Ill_scalpel_320:HG4_PB_pbsv_448:HG2_Ill_GATKHC_533:HG2_Ill_GATKHCSBGrefine_218:HG2_Ill_FB_279:HG2_Ill_150bpfermikitraw_365;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_150bpfermikitraw_365:HG2_Ill_FB_279:HG2_Ill_GATKHCSBGrefine_218:HG2_Ill_GATKHC_533:HG2_Ill_scalpel_320;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.224299;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=0;DistForward=20601;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=1:46004683-46004720;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=149.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:17:0|1:21:3:0:11:./.:1:19:12:0:0/1:30:16:./.:.:.:.:.:.
chr1	46679031	HG2_PB_pbsv_441	A	AAGTATATTAAATTTTGTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTATTTTTTTGTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCAGACTGCGGACTGCAGTGCGCGCAATCTCGGCTCACTAGCAAGCTCCCGCTTCCCGGTTTCACGCCATTCTCCTGCCTTCAGCCTCCCGACGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATGTTTTTGTATTTTAGGAGACGGGGTTTCAACCTTGTTAGCCAGGTGGTCTCGAATCTCCTGAACCTCATGATCCGCCCCGCCTCGGCCTCCCAAGTGCTGGCGATTAACCAGGGCGTGAGCCACCGCGCCCTGGCCC	20	PASS	ClusterIDs=HG4_PB_HySA_597:HG4_PB_pbsv_452:HG2_PB_pbsv_441:HG2_PB_SVrefine2PB10Xhap12_384:HG3_PB_assemblyticsfalcon_544:HG4_PB_assemblyticsfalcon_546:HG2_PB_assemblyticsfalcon_580:HG2_Ill_breakscan11_2980:HG4_PB_SVrefine2PBcRDovetail_255:HG3_PB_SVrefine2Falcon1Dovetail_281:HG4_PB_SVrefine2Falcon1Dovetail_294:HG2_PB_SVrefine2Falcon1plusDovetail_306;NumClusterSVs=12;ExactMatchIDs=HG2_PB_pbsv_441;NumExactMatchSVs=1;ClusterMaxShiftDist=0.15562;ClusterMaxSizeDiff=0.15562;ClusterMaxEditDist=0.195965;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=363;DistBack=-1;DistForward=27550;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=1:46679032-46679045;PctSeqSimilarity=0.9609;PctSizeSimilarity=0.9614;PctRecOverlap=0.9614;SizeDiff=14;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=96;MatchId=150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:32:1|0:5:16:20:6:1|0:0:7:18:0:0/1:23:14:0/1:7:18:.:.:.
chr1	47644770	HG4_PB_SVrefine2Falcon1Dovetail_296	A	ATCTCTCTCTTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCTCCCTCTCTCTCTCTCTCCCCCTCCCCCTCCCCCTCCCCTCCCCTCTCTCTCTCTCTCTCTCTCTCTC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_283:HG4_PB_assemblyticsfalcon_551:HG4_PB_pbsv_455:HG2_PB_pbsv_443:HG3_PB_pbsv_447:HG4_PB_HySA_605:HG3_PB_HySA_591:HG2_PB_HySA_778:HG2_PB_PB10Xdip_2339:HG2_PB_PB10Xdip_2338:HG2_PB_SVrefine2Falcon1plusDovetail_309:HG2_PB_SVrefine2PBcRplusDovetail_303:HG4_PB_SVrefine2Falcon1Dovetail_296:HG4_PB_SVrefine2PBcRDovetail_257:HG2_PB_SVrefine2PB10Xhap12_385:HG3_Ill_SVrefine2DISCOVARDovetail_298;NumClusterSVs=16;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_296;NumExactMatchSVs=1;ClusterMaxShiftDist=0.188341;ClusterMaxSizeDiff=0.188341;ClusterMaxEditDist=0.223256;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=107;DistBack=79605;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=1:47644771-47644803;PctSeqSimilarity=0.954;PctSizeSimilarity=0.9554;PctRecOverlap=0.8938;SizeDiff=-5;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=93;MatchId=152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:44:1/1:3:16:1:22:./.:3:6:0:7:1/1:0:18:./.:.:.:.:.:.
chr1	48058280	HG3_Ill_150bpfermikitraw_391	C	CAGCAGCCCTGGCTGTCAGCTGGGGCAGGGACTCAAATCCCAATTTGGGTCTTTCAGTGGAAACAG	20	PASS	ClusterIDs=HG4_PB_pbsv_458:HG4_PB_assemblyticsfalcon_553:HG4_Ill_GATKHC_550:HG4_Ill_GATKHCSBGrefine_263:HG3_Ill_GATKHC_590:HG3_Ill_GATKHCSBGrefine_235:HG2_Ill_GATKHC_547:HG2_Ill_GATKHCSBGrefine_220:HG4_Ill_svaba_428:HG4_Ill_scalpel_291:HG4_Ill_Krunchall_414:HG4_Ill_250bpfermikitraw_418:HG4_Ill_150bpfermikitraw_398:HG3_Ill_svaba_462:HG3_Ill_scalpel_350:HG3_Ill_Krunchall_419:HG3_Ill_250bpfermikitraw_428:HG3_Ill_150bpfermikitraw_391:HG2_Ill_svaba_435:HG2_Ill_scalpel_325:HG2_Ill_Krunchall_408:HG2_Ill_250bpfermikitraw_430:HG2_Ill_150bpfermikitraw_374:HG2_PB_HySA_782:HG3_PB_HySA_596:HG2_PB_PB10Xdip_2345:HG2_PB_PB10Xdip_2344:HG4_Ill_manta_80:HG4_Ill_Cortex_58:HG3_Ill_manta_68:HG3_Ill_Spiral_329:HG3_Ill_Cortex_70:HG2_Ill_manta_82:HG2_Ill_SpiralSDKrefine_311:HG2_Ill_Cortex_114:HG3_PB_pbsv_449;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_374:HG2_Ill_250bpfermikitraw_430:HG2_Ill_Krunchall_408:HG2_Ill_scalpel_325:HG2_Ill_svaba_435:HG3_Ill_150bpfermikitraw_391:HG3_Ill_250bpfermikitraw_428:HG3_Ill_Krunchall_419:HG3_Ill_scalpel_350:HG3_Ill_svaba_462:HG4_Ill_150bpfermikitraw_398:HG4_Ill_250bpfermikitraw_418:HG4_Ill_Krunchall_414:HG4_Ill_scalpel_291:HG4_Ill_svaba_428;NumExactMatchSVs=15;ClusterMaxShiftDist=0.258065;ClusterMaxSizeDiff=0.258065;ClusterMaxEditDist=0.33871;PBcalls=7;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:48058279-48058282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:46:1/1:1:20:0:9:1/1:0:25:0:21:1/1:0:57:./.:.:.:.:.:.
chr1	48658644	HG2_Ill_svaba_438	T	TGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGTTGGGGGGGTCAGCCCCCCC	20	PASS	ClusterIDs=HG2_PB_pbsv_447:HG4_Ill_svaba_429:HG3_Ill_svaba_466:HG2_Ill_svaba_438;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_svaba_438:HG3_Ill_svaba_466:HG4_Ill_svaba_429;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.192308;PBcalls=1;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=1;DistForward=28542;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=16;REFWIDENED=1:48658643-48658661;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:24:0|1:22:6:4:19:./.:3:0:0:0:0/1:9:6:./.:.:.:.:.:.
chr1	50834985	HG3_Ill_MetaSV_102	A	ATGATGATGGTAGTAATGACGGTGATGATGATGATGGTGATGATGATGGTGGTGATGATGGTAATGGTGATCATGATGATAATGGTGATGGTGGTGGTGGTGATGATGGTGATGGTGGTGGTGATCATGATGGTAGTGATATGATGATGGCGATGATGGTGGTGGTATAATGATAGTGGTGATGATGATGGTGCTGATGATGGTGATGGTGATGATGATAGTGGTGATGGTGGTGGTGATGATGGTGATGGTGGTGGTGATCATGATGGTAGTGATAATGACGATGATGGCGATGATGGTGGTGGTATAATGATAATGGTGATGATGATGGTGCTGATGATGGTGATGATGATAATGGTGATGGTGGTGGTGATGATGATGGTGGTGATGATGAAGATGGTGGTGGCGATGATGATGATGGTGATGATGAAGATGTTGGTGATGATGATGGTGATAATGGTGATGGTGATGATAGTGGTGATAATGGTGGTGGTAATGATCATGATGGTAGTGATAATGATGATGGTGGTGATAATGATGATAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_394:HG2_PB_HySA_808:HG4_PB_pbsv_465:HG2_PB_PB10Xdip_2360:HG3_PB_pbsv_457:HG2_PB_pbsv_453:HG2_PB_PB10Xdip_2359:HG4_Ill_MetaSV_100:HG4_Ill_GATKHCSBGrefine_267:HG3_Ill_MetaSV_102:HG3_Ill_GATKHCSBGrefine_240:HG2_Ill_MetaSV_97:HG2_Ill_GATKHCSBGrefine_224:HG4_PB_HySA_618:HG2_Ill_breakscan11_2981:HG3_PB_SVrefine2PBcRDovetail_279:HG2_Ill_SVrefine2DISCOVARplusDovetail_316:HG4_PB_SVrefine2Falcon1Dovetail_303:HG3_PB_SVrefine2Falcon1Dovetail_288:HG2_PB_SVrefine2Falcon1plusDovetail_313:HG3_Ill_SVrefine2DISCOVARDovetail_301:HG4_PB_SVrefine2PBcRDovetail_262:HG4_Ill_SVrefine2DISCOVARDovetail_278:HG2_PB_SVrefine2PBcRplusDovetail_309;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_224:HG2_Ill_MetaSV_97:HG3_Ill_GATKHCSBGrefine_240:HG3_Ill_MetaSV_102:HG4_Ill_GATKHCSBGrefine_267:HG4_Ill_MetaSV_100;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.079858;ClusterMaxEditDist=0.267968;PBcalls=14;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=543;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=232;REFWIDENED=1:50834764-50834995;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:26:0:25:./.:59:317:65:289:1/1:0:33:1/1:2:127:.:1051:.
chr1	52177138	HG2_PB_PB10Xdip_2379	A	ACCCCCCCACCTCCCTCCCGGACGGGAAGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGATCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCCGATGGGGCGGCTGGCCGGGCGGGGGGCTGACC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_305:HG3_PB_SVrefine2Falcon1Dovetail_289:HG4_PB_SVrefine2PBcRDovetail_265:HG4_PB_pbsv_469:HG3_PB_pbsv_459:HG2_PB_SVrefine2PB10Xhap12_397:HG2_PB_HySA_817:HG2_PB_PB10Xdip_2380:HG2_PB_PB10Xdip_2379:HG2_PB_pbsv_457:HG2_PB_SVrefine2PBcRplusDovetail_310:HG3_PB_SVrefine2PBcRDovetail_280:HG2_PB_SVrefine2Falcon1plusDovetail_316;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_2379:HG2_PB_PB10Xdip_2380;NumExactMatchSVs=2;ClusterMaxShiftDist=0.215553;ClusterMaxSizeDiff=0.215553;ClusterMaxEditDist=0.304762;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=404;DistBack=20;DistForward=36086;DistMin=20;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=329;REFWIDENED=1:52176898-52177226;PctSeqSimilarity=0.9951;PctSizeSimilarity=0.9902;PctRecOverlap=0.9902;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:1:36:0:11:./.:1:3:0:1:1/1:0:9:1/1:2:43:.:.:.
chr1	52270083	HG3_Ill_SVrefine2DISCOVARDovetail_308	A	AACATTTCCCAAGTATCTCCTACGTTCAGACACATTTCCCAAGTATCTCCTAGGTTCAGACACATTTCCCAAGTATCCGCTACGTTCAGAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_338:HG3_PB_pbsv_460:HG4_PB_HySA_625:HG2_PB_pbsv_458:HG2_PB_HySA_818:HG2_PB_PB10Xdip_2382:HG2_PB_PB10Xdip_2381:HG3_PB_HySA_617:HG4_PB_SVrefine2Falcon1Dovetail_306:HG4_Ill_SVrefine2DISCOVARDovetail_282:HG3_PB_SVrefine2PBcRDovetail_281:HG3_PB_SVrefine2Falcon1Dovetail_290:HG3_Ill_SVrefine2DISCOVARDovetail_308:HG2_PB_SVrefine2PBcRplusDovetail_311:HG2_PB_SVrefine2PB10Xhap12_398:HG2_PB_SVrefine2Falcon1plusDovetail_317:HG2_Ill_SVrefine2DISCOVARplusDovetail_323;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_338:HG4_PB_SVrefine2Falcon1Dovetail_306:HG4_Ill_SVrefine2DISCOVARDovetail_282:HG3_PB_SVrefine2PBcRDovetail_281:HG3_PB_SVrefine2Falcon1Dovetail_290:HG3_Ill_SVrefine2DISCOVARDovetail_308:HG2_PB_SVrefine2PBcRplusDovetail_311:HG2_PB_SVrefine2PB10Xhap12_398:HG2_PB_SVrefine2Falcon1plusDovetail_317:HG2_Ill_SVrefine2DISCOVARplusDovetail_323;NumExactMatchSVs=10;ClusterMaxShiftDist=0.076087;ClusterMaxSizeDiff=0.0434783;ClusterMaxEditDist=0.235294;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=90;DistBack=56857;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=663;REFWIDENED=1:52270084-52270746;PctSeqSimilarity=0.9882;PctSizeSimilarity=1;PctRecOverlap=0.1429;SizeDiff=0;StartDistance=-78;EndDistance=-78;GTMatch=0;TruScore=71;MatchId=157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:1:29:1:28:0/0:5:0:9:0:./.:25:3:./.:.:.:.:.:.
chr1	53564908	HG2_Ill_250bpfermikitraw_455	G	GCCTCGGTACACTCACACTGCCTCAGTATAATCACTCCACCTTGGTACACTCACACACCCCT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_2389:HG3_PB_pbsv_465:HG4_Ill_svaba_452:HG2_PB_pbsv_463:HG3_Ill_svaba_483:HG2_Ill_svaba_458:HG3_PB_HySA_625:HG4_PB_assemblyticsfalcon_587:HG4_PB_pbsv_476:HG4_Ill_Krunchall_446:HG4_Ill_GATKHC_590:HG4_Ill_GATKHCSBGrefine_272:HG4_Ill_250bpfermikitraw_445:HG3_PB_assemblyticsfalcon_585:HG3_Ill_Spiral_352:HG3_Ill_Krunchall_442:HG3_Ill_GATKHC_623:HG3_Ill_GATKHCSBGrefine_245:HG3_Ill_250bpfermikitraw_450:HG3_Ill_150bpfermikitraw_412:HG2_Ill_scalpel_345:HG2_Ill_SpiralSDKrefine_332:HG2_Ill_Krunchall_430:HG2_Ill_GATKHC_582:HG2_Ill_GATKHCSBGrefine_227:HG2_Ill_250bpfermikitraw_455:HG2_Ill_150bpfermikitraw_398:HG2_PB_HySA_827:HG2_Ill_breakscan11_2983;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_398:HG2_Ill_250bpfermikitraw_455:HG2_Ill_GATKHCSBGrefine_227:HG2_Ill_GATKHC_582:HG2_Ill_Krunchall_430:HG2_Ill_SpiralSDKrefine_332:HG2_Ill_scalpel_345:HG3_Ill_150bpfermikitraw_412:HG3_Ill_250bpfermikitraw_450:HG3_Ill_GATKHCSBGrefine_245:HG3_Ill_GATKHC_623:HG3_Ill_Krunchall_442:HG3_Ill_Spiral_352:HG3_PB_assemblyticsfalcon_585:HG4_Ill_250bpfermikitraw_445:HG4_Ill_GATKHCSBGrefine_272:HG4_Ill_GATKHC_590:HG4_Ill_Krunchall_446:HG4_PB_assemblyticsfalcon_587;NumExactMatchSVs=19;ClusterMaxShiftDist=0.109375;ClusterMaxSizeDiff=0.09375;ClusterMaxEditDist=0.298507;PBcalls=8;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=61;DistBack=708;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=1:53564893-53564935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:10:24:./.:1:0:9:29:./.:12:164:0:0:1/1:1:12:./.:.:.:.:.:.
chr1	53991126	HG2_PB_pbsv_471	A	AAAGGGCTGGGAGCTGGGGAGGTGGGGAGGTTGGGGGTGCTGGGGAGTCTGGGAGGCTGGGGAGCGTGGGGGCTGGGAGGCTGGGGAGGTGGAGGCTGGTGACGGTGGGAGGCTGGCGGGCTGGGGGCTGGAGGCTGCGGGAGGTGGGGGGCTGGGAGGCGGGGAGGTGGGGGGCTGGAAGGCTGGGGAGGTGGGGGCTAAGAAGGCTGGGGGTGGGGTGCTGGGGAGGCTGGGGGAGGTGGGGCTGGGGAGGCTGGGGGGCTGGGGCGCTGGGGAGGGCTGGGGAGGCTGGGGGTGCTGGGCAGGGCTGAGGAGGTGGCGGAGGCTGGGGGCAAGGGGTGGGGGAGGTAGGAGAGGCTGGGGAGGCTGGGCTCAAGGGCGGGGATGTCTGGGAGGGCTGGGCGGGTGGGGGGCTAGGAGTGGAGGGAGAGCCGGGGAGGCTGGGGAGGGCTGGG	20	PASS	ClusterIDs=HG2_PB_pbsv_471:HG3_PB_pbsv_472:HG2_PB_PB10Xdip_2399:HG2_Ill_breakscan11_2984:HG2_PB_HySA_836:HG4_PB_assemblyticsfalcon_592:HG3_PB_assemblyticsfalcon_591:HG4_PB_pbsv_480:HG3_PB_SVrefine2Falcon1Dovetail_296:HG4_PB_SVrefine2Falcon1Dovetail_312:HG2_PB_SVrefine2PBcRplusDovetail_317:HG2_PB_SVrefine2PB10Xhap12_404:HG3_PB_SVrefine2PBcRDovetail_288:HG2_PB_SVrefine2Falcon1plusDovetail_323:HG4_PB_SVrefine2PBcRDovetail_269;NumClusterSVs=15;ExactMatchIDs=HG2_PB_pbsv_471;NumExactMatchSVs=1;ClusterMaxShiftDist=0.221963;ClusterMaxSizeDiff=0.221963;ClusterMaxEditDist=0.276671;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=454;DistBack=22456;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:53991127-53991126;PctSeqSimilarity=0.9461;PctSizeSimilarity=0.9956;PctRecOverlap=0.9758;SizeDiff=2;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=97;MatchId=159.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:./.:1:5:0:1:./.:3:9:4:11:0/1:7:7:./.:2:13:.:.:.
chr1	55705906	HG4_Ill_SVrefine2DISCOVARDovetail_295	A	AGTCCTAGAAATTTCTTTGGGAGAGCTGGGTTCCCATGTAGTTTAGAAACTGAAAGGGCATATAGACCAAGAGAGCACTATCAAGTCACCTAGAGTTCAGAAACATTTAAGTATAAGTCAGAGGGGCATGAAAGGCTGTTTCCAGAAAGGTAGCTACAATCCAGCTTCTCCTCTGATTCTGAGCTCAGCTCAGAAGTGGCAAAATTCTTTGAAAGGCGGAAGAGTCAGAGCTTAGGGATGCATAAACTACTAAAAGCTTTGCCTAGAGCACAGACATAAAAGCACAGCAAGAACACAGCAGTGTATGTCTTGAATTAATCCTGGCTCAAGGGAAGCCTCAGGTCTTTATTTTACCCAAACCCAAAGAATAATCAAATTGTCATTATTAAATGCTTCCATGTTTAGAATAGGTGCTATGTTTATTTTTCTTTAATGTTTGCTTTGATTAAAGGAAGCCAATATGTACTGAGCACACAGTGTTCACCTGTCACTGTAAGACTATACATTAATTAACTCTTTAAAATTTTCATCCACCTTTCTACACACATTTACAATTGAGAAAACTAAGAATTAGTGTTTATGACTTGCTCAAAATAACACAAATATTAGGACTTACTTATAGAGCCAAGTTGATAACCAAATTAATGTATTAATTAATAACATCACCAAAAGAGACTTGCTCACAGTTTATTCTAAATCTCTGTTGCAAACCTAGAGTCTTTTAATTGTCTGATTGATGGTCTGATTGTAGCAATACTTTGTGTCAGGTCCATGAATGACAAATTTGACATACTAAATGATCAAATCAAATTTAAAGTGTGAGTTCTGGACTTGCACTGCCCAATATGGTAGCCTCAGCCCTATCTGATTACTATATTTAAATTAATAAAAAATGAGTAAAATAAAAAATTCCTTTCCTCAATCACATAAGCCACATTTTCATTGTTCAGTAGCCATAGATGGCTGGTGAATGCCACATTGGATAGCATATTATTCTCAATGAACATTTCCAGGATATTTTCAACATCACAACAAATTGTGTTGAAAAATTAAATCCCATTTTAATGTTAACAGATCTCCTGTGCATTTGTTAATTTTTAAGCAATTTAACATATTACCTGACTCTATTCTCACAATCATCATATGAAAAATACCTAAGTTAATGTTACTATGTTTTATAAAGCAGACTCACCCTGGGATTTTTTTAGAGCCACAGCTGAGGTTAAAGACCCTGGGGACTTAAAACTTGTGCAACTTGTTTATGCCCCTCTTCTTTCCTCTTCTCTTCAACCACTGTCTTTTCCTAGGTGATGTCATCCAATTCCACAACTTTAAATACCTCTTGCCTTGGGACTGGGGTTGATATCCAACTGCTTGACATTGCCATGTGAGTTCTAATAGGCACCTCAAACTTAATATGTCTAAAACAGTACTCTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGGGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGATTACAGGCGCCCGCTACCAC	20	PASS	ClusterIDs=HG4_PB_HySA_658:HG4_PB_pbsv_492:HG3_PB_pbsv_481:HG3_PB_HySA_650:HG2_PB_pbsv_478:HG2_PB_HySA_853:HG2_PB_PB10Xdip_2411:HG2_PB_PB10Xdip_2412:HG2_PB_SVrefine2Falcon1plusDovetail_329:HG3_PB_SVrefine2Falcon1Dovetail_304:HG2_10X_SVrefine210Xhap12_352:HG4_PB_SVrefine2Falcon1Dovetail_318:HG4_PB_SVrefine2PBcRDovetail_276:HG4_Ill_SVrefine2DISCOVARDovetail_295:HG2_PB_SVrefine2PBcRplusDovetail_322:HG2_PB_SVrefine2PB10Xhap12_410:HG2_Ill_SVrefine2DISCOVARplusDovetail_337:HG3_PB_SVrefine2PBcRDovetail_292;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_410:HG2_PB_SVrefine2PBcRplusDovetail_322:HG4_Ill_SVrefine2DISCOVARDovetail_295:HG4_PB_SVrefine2PBcRDovetail_276;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0577573;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.221008;PBcalls=15;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1607;DistBack=38632;DistForward=2703;DistMin=2703;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:55705907-55705907;PctSeqSimilarity=0.9994;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:18:0:14:./.:0:3:0:2:1/1:0:21:./.:19:246:.:1639:.
chr1	57600203	HG2_PB_SVrefine2PBcRplusDovetail_330	G	GTGAACCAAGATCGCACCACTGCACTCCAGCCTGGGTAACAGAGTGACACTCCATCTCAAAAAAACAAAACAAAACAAAACAAAAAAAAGAAAGACTATTAATATGGGATACTCTGACCCTTATCATCTTTACTTCAGATTTAAACATATTCAGTCCTTTTAACCATTTTTTAGCACCTTTGTTGAGGCATATTAACAAGCTAAGATTGCCAGATGCTACAGAAGTCTAATGTTAATCTAACAAAACTGGGGTAGACTGAGACAGAAAACATTCAACTCTACTTCCTTCCTAATTCTCCACTAGGGATCTAACATTTCCTCTACGAAGCTAAATGGCTTTGGGCGGAAATGATTTTACTATTGTTCTCTTTGTGTCCAGCTAAAGAATCAAAAATAGTGCTACAAGGTTTGGTGGTATCTTTCTTTGGGGACAGTTTAGCCACATTTGAGTAAGGATGCAGATAAAAGTAAAGAACAAAAACTACCTAATTAGTTAAAATCAAGGTAATTAGGACTTTAATGATCTGTGCACAGCCTATTTGATGGTGGGGTCTGTGATAAAATAGCAAAGCCCAAAACATGACCCTCGGACAAGATAAAACACCAGATACCCTTCACTTCTGTCCTTGTCCCTTTGATTACACACACCAGGTGTCATGGTAATGGAAGAGACTAGAGATGATATCATATATCAGGGCATACAAATCATTGTGAAAGTATCTCTCAGTTGGGCTTGATCCACATTACTAAGCTCCCATAAAGAATGCTAGAAGACTAATAATAATTTCCTCCAAGTTTGCATAAGCCCAGAGTTCTCCACATCCTGTGTTCCCAAAGATCATAGGAGCCACATCTGTGTCAAGAAGTTCAGCGTAGTTTCCAGGTCCCCAGTTGCCAGGATCCACCTCATCAGAATATGTTTCCATTTGTCTATATCCAATTTAAAATGTGGACTTCAGAACTGAGCACAGGTCTCCAAACTACAGTCTTTACAGGAGAGAGAACCCACCTCCTTGGAGTTTTGAAGCCATATTTTTATGAAGGCAGATAAAGCTTACATTAGGCTTGTAATCCTGTTGAGTTCAAGCCCTTTTACTACCAATGCTTGTGCCTTCATCCTAAACTCCCTTCTACCAAGGCATCCCCAAATAGGCCCATCTTCCTCTATAATATAGAGGTAAATTGCATTGATTTTTGATTCAGGCTGACTTGAGGTGAAATCCCAGTTCTGCTTCCTACATGCTAGGTTGTATTGTAAATATTTTTAAATTTTCTGTATATGATGATGTTTTGACACCTTAAGCAATCTTTCTGGCTGGGGAGAAACTGCTTCTCAATTCTCAGACATAGCAAAAGACCCAGCCTGGAGCATGTCTTTGATATGCAAACTAACCAATCCGGAGCCATCCCTCCTCTGCCTGGCTCATACACCCCAGAAAGCAATATTCCTCTGCCTTCACTATCTCGGGGCAGAAGGGGATCACCCCTGCAGCTTAGAGCCAGAAGAAATGATTCAAACTAGCCAACCACTCACTCTGACCTGCCTTGCCTTTCCAGCGGGAATCCCAGTAAAGGAGTGGCCTTAGGTCTCCGCCTTCTGCTTCTTGTCTTTTGCGTCCTGACTACCCTGGTGTCTTTCCCGTATGGTCCTGTGTAGTGTGCTGTGCTCCAGTCTCCAGGACTCGTGAGTAAAACAAACTGTTTTTGTTGTTGTTGTTGTTGTTGTTTTCCCGGAGGCTCTCCAATGTCACCTCTTATGGCTGCACCTGACTGACCAAAGAAAATGTTGTACATATACACCACAGAATACTATGCAGTCATAAAAAAGAATGAGATCACATCTTTTGTGAGAATGTAGATGGAGTTGGAGGCCATTATCCCTAGCAAACTAATATAGGAACAGAAAGCCAACTACCACATGTTCTCACTTATAAATGGGAGCAAAATGATGAGAACTCATGGACATGGACACTGGAGCCTACTTGAGAGTGGAGGGT	20	PASS	ClusterIDs=HG4_PB_HySA_670:HG2_PB_PB10Xdip_2450:HG4_PB_pbsv_506:HG2_PB_assemblyticsfalcon_661:HG4_PB_assemblyticsfalcon_626:HG3_PB_assemblyticsfalcon_622:HG2_PB_SVrefine2Falcon1plusDovetail_340:HG4_PB_SVrefine2Falcon1Dovetail_327:HG4_PB_SVrefine2PBcRDovetail_284:HG4_Ill_SVrefine2DISCOVARDovetail_308:HG2_PB_SVrefine2PBcRplusDovetail_330:HG2_10X_SVrefine210Xhap12_360:HG3_PB_SVrefine2Falcon1Dovetail_315:HG2_PB_SVrefine2PB10Xhap12_420;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_360:HG2_PB_SVrefine2PBcRplusDovetail_330:HG4_Ill_SVrefine2DISCOVARDovetail_308:HG4_PB_SVrefine2PBcRDovetail_284;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0858896;ClusterMaxSizeDiff=0.084908;ClusterMaxEditDist=0.171779;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1996;DistBack=74362;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=1:57600204-57600207;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:37:0|1:34:0:0:27:0|1:21:0:0:19:0/1:20:17:0/1:65:152:.:2021:.
chr1	58071857	HG4_Ill_GATKHCSBGrefine_288	T	TTCCGGTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTAGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2987:HG4_PB_HySA_675:HG2_PB_HySA_880:HG4_Ill_SVrefine2DISCOVARDovetail_309:HG3_PB_pbsv_496:HG4_PB_pbsv_507:HG4_Ill_GATKHCSBGrefine_288:HG3_PB_assemblyticsfalcon_623:HG4_PB_assemblyticsfalcon_627:HG3_PB_SVrefine2PBcRDovetail_301:HG2_PB_pbsv_494:HG3_Ill_SVrefine2DISCOVARDovetail_332:HG4_PB_HySA_674:HG3_PB_SVrefine2Falcon1Dovetail_316:HG3_Ill_MetaSV_105:HG3_Ill_GATKHCSBGrefine_257:HG2_Ill_SVrefine2DISCOVARplusDovetail_349:HG2_Ill_GATKHCSBGrefine_240:HG4_PB_SVrefine2Falcon1Dovetail_328:HG3_PB_HySA_686;NumClusterSVs=20;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_332:HG3_PB_SVrefine2PBcRDovetail_301:HG4_Ill_GATKHCSBGrefine_288:HG4_Ill_SVrefine2DISCOVARDovetail_309;NumExactMatchSVs=4;ClusterMaxShiftDist=0.211268;ClusterMaxSizeDiff=0.211268;ClusterMaxEditDist=0.26988;PBcalls=12;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=211;DistBack=10;DistForward=407;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:58071858-58071869;PctSeqSimilarity=0.9976;PctSizeSimilarity=0.9953;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:15:./.:20:18:2:1:1|0:0:11:17:0:0/1:31:6:./.:.:.:.:.:.
chr1	58205098	HG2_PB_SVrefine2PB10Xhap12_423	A	ACTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTTCCCTCCCCTCCCCTCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_423:HG2_PB_HySA_883:HG4_PB_pbsv_509:HG2_PB_PB10Xdip_2453:HG2_PB_PB10Xdip_2452:HG4_PB_SVrefine2PBcRDovetail_286:HG2_PB_SVrefine2PBcRplusDovetail_332;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_423:HG4_PB_SVrefine2PBcRDovetail_286:HG2_PB_SVrefine2PBcRplusDovetail_332;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0784314;ClusterMaxSizeDiff=0.0594059;ClusterMaxEditDist=0.156863;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=50;DistBack=11699;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=1:58205099-58205156;PctSeqSimilarity=0.9915;PctSizeSimilarity=1;PctRecOverlap=0.8431;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=94;MatchId=164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:54:1/1:2:14:0:6:./.:0:0:1:0:./.:0:0:./.:.:.:.:.:.
chr1	59871863	HG3_PB_HySA_696	A	ATACTTGTGGCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2989:HG4_PB_pbsv_518:HG4_PB_HySA_689:HG3_PB_pbsv_503:HG3_PB_HySA_696:HG2_PB_pbsv_504:HG2_PB_assemblyticsfalcon_679:HG2_Ill_MetaSV_110:HG2_PB_SVrefine2Falcon1plusDovetail_347;NumClusterSVs=9;ExactMatchIDs=HG3_PB_HySA_696;NumExactMatchSVs=1;ClusterMaxShiftDist=0.103611;ClusterMaxSizeDiff=0.103611;ClusterMaxEditDist=0.262997;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=-13;DistForward=20480;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:59871864-59871863;PctSeqSimilarity=0.9876;PctSizeSimilarity=0.9876;PctRecOverlap=0.9876;SizeDiff=-4;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=98;MatchId=166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:40:0|1:40:1:2:38:0|1:18:0:0:12:0/1:32:10:0/1:12:27:.:.:.
chr1	61288095	HG3_Ill_SVrefine2DISCOVARDovetail_348	G	GATACCTAGTTTTCTTAGGAAAAGAAGGTGAAGCAGTCAGGTGAAGATAGTACCATTTGCTGAGCTAAGCAATACTAGCAAAAGTGGGGACCATGAGTTCATTTGGGAATATTTTAAGTTTGGGCTACTCTAATTCCCTGAAAATATCAGGTGCATAGTTTGATGTGTCTAATCAAACTTATACAGCACTTAAGTGTGTGTTTCAAAATAAATATTCAATACATATTGATATGATTTATTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_375:HG3_PB_pbsv_507:HG2_PB_pbsv_508:HG2_PB_HySA_910:HG3_PB_HySA_705:HG2_PB_PB10Xdip_2475:HG2_PB_SVrefine2PBcRplusDovetail_340:HG2_PB_SVrefine2PB10Xhap12_435:HG4_PB_SVrefine2PBcRDovetail_293:HG4_PB_SVrefine2Falcon1Dovetail_339:HG4_Ill_SVrefine2DISCOVARDovetail_323:HG4_Ill_MetaSV_115:HG4_Ill_250bpfermikitraw_509:HG3_PB_SVrefine2Falcon1Dovetail_327:HG3_Ill_SVrefine2DISCOVARDovetail_348:HG3_Ill_MetaSV_106:HG2_PB_SVrefine2Falcon1plusDovetail_350:HG2_Ill_SVrefine2DISCOVARplusDovetail_369;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_375:HG4_PB_SVrefine2PBcRDovetail_293:HG4_PB_SVrefine2Falcon1Dovetail_339:HG4_Ill_SVrefine2DISCOVARDovetail_323:HG4_Ill_MetaSV_115:HG4_Ill_250bpfermikitraw_509:HG3_PB_SVrefine2Falcon1Dovetail_327:HG3_Ill_SVrefine2DISCOVARDovetail_348:HG3_Ill_MetaSV_106:HG2_PB_SVrefine2Falcon1plusDovetail_350:HG2_Ill_SVrefine2DISCOVARplusDovetail_369;NumExactMatchSVs=11;ClusterMaxShiftDist=0.194503;ClusterMaxSizeDiff=0.190275;ClusterMaxEditDist=0.237069;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=240;DistBack=-239;DistForward=55;DistMin=-239;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=243;REFWIDENED=1:61288096-61288338;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:24:1|0:0:15:16:4:./.:8:1:1:24:0/1:5:19:./.:.:.:.:.:.
chr1	62603054	HG2_PB_SVrefine2PB10Xhap12_441	T	TCGGAGGGGGGAACATAGAATGAGGGGGAACAGCAGCCTGAGGGGTAAATGCCTCTGGAGGGGGGAACACAGAGTGAGGGGGCACAGCAGCCTGAGGGGGAAATGCCTCTGGAGGGGGGAACACAGAGTGAGGGGGCACAGCAGTCTGAGGGGGAAATGCCTCTGGAGGGGGGAACACAGAGTGAGGGGGGACAGAGGCCTGAGGGGGAAATGCCTCCGGAGGGGGGGACACAGAGTGAGGGGGGACAGAGGCCTGAGGGGGAAATGCCTCCGGAGGGGGGGACACAGAGTGAGGGGGGACAGAGGCCTGAGGGGGAAATGCCTCCGGAGGGGGGAACACAGAGTGAGGGGGGACAGAGGCCTGAGGGGGAAATGCCTC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_331:HG4_PB_pbsv_527:HG2_PB_pbsv_515:HG3_PB_pbsv_514:HG2_PB_HySA_928:HG2_PB_PB10Xdip_2547:HG2_PB_PB10Xdip_2548:HG2_PB_SVrefine2PBcRplusDovetail_344:HG2_PB_SVrefine2PB10Xhap12_441:HG4_PB_SVrefine2PBcRDovetail_297:HG2_PB_SVrefine2Falcon1plusDovetail_354:HG3_PB_SVrefine2PBcRDovetail_314:HG4_PB_SVrefine2Falcon1Dovetail_342;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_441:HG2_PB_SVrefine2PBcRplusDovetail_344;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0838794;ClusterMaxSizeDiff=0.0812582;ClusterMaxEditDist=0.22585;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=378;DistBack=13557;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=265;REFWIDENED=1:62603055-62603319;PctSeqSimilarity=0.9827;PctSizeSimilarity=1;PctRecOverlap=0.4011;SizeDiff=0;StartDistance=-227;EndDistance=-227;GTMatch=0;TruScore=79;MatchId=169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:1:31:1:20:./.:0:3:0:3:./.:0:0:0/1:3:8:.:.:.
chr1	63939661	HG2_PB_PB10Xdip_2552	T	TGGCCAGCCGCCCCGTCCGGGAGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCCGGGGGGGGGTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_358:HG4_PB_pbsv_533:HG3_PB_SVrefine2Falcon1Dovetail_333:HG3_PB_pbsv_525:HG4_PB_SVrefine2Falcon1Dovetail_345:HG2_PB_HySA_949:HG2_PB_PB10Xdip_2553:HG2_PB_PB10Xdip_2552:HG2_PB_SVrefine2PBcRplusDovetail_347:HG2_PB_SVrefine2PB10Xhap12_445;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_2552:HG2_PB_PB10Xdip_2553;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0840336;ClusterMaxSizeDiff=0.0672269;ClusterMaxEditDist=0.192469;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=117;DistBack=7;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=463;REFWIDENED=1:63939601-63940063;PctSeqSimilarity=0.9958;PctSizeSimilarity=0.9915;PctRecOverlap=0.9832;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:73:1/1:1:13:3:34:./.:0:0:0:0:./.:2:3:./.:.:.:.:.:.
chr1	64850191	HG4_PB_HySA_728	T	TCCACTTTTAAAGAATTGTCGAGCCGCGCGCCGCCCGACCGCCGGGAGGATGGAGTTCAGCGGGCAGCGGAGCTGTCTCAGTCTTTGCCGCCGCGCCGGCGAGCGCCGCCCGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGTGGGGCCCGAGGGCAAGGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTCTGCCCGGCGGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCGCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCAGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCGTCCGGGAGGGAGGTGGGGGGGGGTCACCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCGTCTGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCGCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCTGTCTGGGAGGTGAGGGGAGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGAGGTGGGGGGGTCGGCCCCCCGCCCGCGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCGGCCCCCTGCCTGGCCAGCCGCCCCGTCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTGTTTATCTGCTGACCTTCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAGAAAGAAGATGC	10	PASS	ClusterIDs=HG2_PB_HySA_955:HG4_PB_HySA_728:HG4_PB_pbsv_536:HG2_PB_pbsv_522:HG3_PB_pbsv_529:HG4_PB_SVrefine2Falcon1Dovetail_348;NumClusterSVs=6;ExactMatchIDs=HG4_PB_HySA_728;NumExactMatchSVs=1;ClusterMaxShiftDist=0.121125;ClusterMaxSizeDiff=0.116357;ClusterMaxEditDist=0.288426;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1974;DistBack=11;DistForward=3583;DistMin=11;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:64850192-64850192;PctSeqSimilarity=0.9513;PctSizeSimilarity=0.9177;PctRecOverlap=0.9182;SizeDiff=-177;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=92;MatchId=171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:52:0|1:30:0:0:40:0|1:22:0:0:9:0/1:34:7:0/1:63:150:.:2103:.
chr1	64958061	HG2_Ill_GATKHCSBGrefine_269	T	TCCCCCTATTGTTTTCTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_pbsv_538:HG3_PB_assemblyticsfalcon_683:HG2_PB_pbsv_524:HG3_PB_HySA_747:HG2_PB_assemblyticsfalcon_720:HG3_PB_SVrefine2Falcon1Dovetail_337:HG4_PB_SVrefine2Falcon1Dovetail_350:HG4_PB_SVrefine2PBcRDovetail_302:HG2_Ill_SVrefine2DISCOVARplusDovetail_383:HG3_PB_SVrefine2PBcRDovetail_321:HG2_PB_HySA_958:HG2_PB_SVrefine2PBcRplusDovetail_350:HG2_PB_SVrefine2PB10Xhap12_449:HG2_10X_SVrefine210Xhap12_387:HG3_Ill_MetaSV_109:HG3_Ill_GATKHCSBGrefine_284:HG2_Ill_manta_107:HG2_Ill_GATKHCSBGrefine_269:HG2_PB_SVrefine2Falcon1plusDovetail_360:HG4_PB_HySA_729:HG2_PB_PB10Xdip_2555:HG2_PB_PB10Xdip_2556:HG2_Ill_breakscan11_2990;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_269:HG2_Ill_manta_107:HG3_Ill_GATKHCSBGrefine_284:HG3_Ill_MetaSV_109;NumExactMatchSVs=4;ClusterMaxShiftDist=0.170472;ClusterMaxSizeDiff=0.170472;ClusterMaxEditDist=0.230089;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=323;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=1:64958062-64958078;PctSeqSimilarity=0.9848;PctSizeSimilarity=0.97;PctRecOverlap=0.97;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:7:0:23:./.:0:10:0:2:1/1:0:34:1/1:2:77:.:.:.
chr1	65891826	HG2_Ill_svaba_550	A	AGAAATGTCAAGAAAATCAGCAAGCAGGCCATACAGATCTCTAGGGAAAAAGCACTTTAGGCACCAGGAAAGCTGTATGCTAAGGCCCG	20	PASS	ClusterIDs=HG2_PB_HySA_966:HG3_PB_pbsv_533:HG3_PB_HySA_754:HG2_10X_SVrefine210Xhap12_394:HG2_PB_PB10Xdip_2563:HG2_PB_pbsv_525:HG2_PB_PB10Xdip_2562:HG2_PB_SVrefine2PBcRplusDovetail_351:HG3_Ill_svaba_577:HG3_Ill_GATKHC_745:HG3_Ill_GATKHCSBGrefine_285:HG3_Ill_250bpfermikitraw_554:HG2_PB_SVrefine2Falcon1plusDovetail_361:HG2_Ill_svaba_550:HG2_Ill_GATKHC_698:HG2_Ill_GATKHCSBGrefine_270:HG2_Ill_250bpfermikitraw_550:HG4_PB_SVrefine2Falcon1Dovetail_351:HG2_PB_SVrefine2PB10Xhap12_450;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_550:HG2_Ill_GATKHCSBGrefine_270:HG2_Ill_GATKHC_698:HG2_Ill_svaba_550:HG2_PB_SVrefine2Falcon1plusDovetail_361:HG3_Ill_250bpfermikitraw_554:HG3_Ill_GATKHCSBGrefine_285:HG3_Ill_GATKHC_745:HG3_Ill_svaba_577;NumExactMatchSVs=9;ClusterMaxShiftDist=0.160428;ClusterMaxSizeDiff=0.160428;ClusterMaxEditDist=0.234043;PBcalls=10;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=88;DistBack=9048;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=90;REFWIDENED=1:65891827-65891916;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=173.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:42:1|0:2:30:14:0:./.:7:0:2:18:0/1:19:13:./.:.:.:.:.:.
chr1	66055926	HG2_Ill_MetaSV_120	T	TAAAATTATTCATATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_536:HG3_Ill_MetaSV_110:HG2_PB_pbsv_527:HG2_PB_assemblyticsfalcon_730:HG3_PB_assemblyticsfalcon_689:HG3_PB_HySA_756:HG2_PB_HySA_968:HG2_PB_SVrefine2Falcon1plusDovetail_363:HG2_PB_SVrefine2PBcRplusDovetail_353:HG3_Ill_GATKHCSBGrefine_287:HG2_Ill_MetaSV_120:HG2_Ill_GATKHCSBGrefine_272:HG4_PB_SVrefine2Falcon1Dovetail_353:HG3_PB_SVrefine2Falcon1Dovetail_339:HG3_PB_SVrefine2PBcRDovetail_324:HG2_Ill_breakscan11_2991;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_272:HG2_Ill_MetaSV_120:HG3_Ill_GATKHCSBGrefine_287;NumExactMatchSVs=3;ClusterMaxShiftDist=0.227723;ClusterMaxSizeDiff=0.224422;ClusterMaxEditDist=0.273927;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=-4;DistForward=0;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:66055927-66055941;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:44:0|1:25:1:0:46:0|1:30:0:0:7:0/1:32:14:0/1:10:30:.:.:.
chr1	66079461	HG2_Ill_GATKHCSBGrefine_274	A	AGAAAAAAAAAAAGATTCAACAGGAGAACAACCCAGTTAAAATAAAAAAAAAAAC	20	PASS	ClusterIDs=HG3_PB_pbsv_538:HG3_Ill_svaba_578:HG2_PB_pbsv_529:HG3_Ill_GATKHC_746:HG3_Ill_GATKHCSBGrefine_289:HG2_Ill_manta_109:HG2_Ill_GATKHC_699:HG2_Ill_GATKHCSBGrefine_274;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_274:HG2_Ill_GATKHC_699:HG2_Ill_manta_109:HG3_Ill_GATKHCSBGrefine_289:HG3_Ill_GATKHC_746:HG3_Ill_svaba_578;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.214286;PBcalls=2;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=-1;DistForward=6;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=1:66079460-66079462;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=175.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:34:0|1:33:2:4:30:0|1:24:0:1:11:0/1:9:6:./.:.:.:.:.:.
chr1	67096524	HG2_Ill_GATKHCSBGrefine_277	A	AAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG3_PB_pbsv_544:HG2_PB_pbsv_535:HG3_Ill_GATKHCSBGrefine_293:HG3_Ill_GATKHC_754:HG2_Ill_GATKHCSBGrefine_277;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_277:HG3_Ill_GATKHCSBGrefine_293;NumExactMatchSVs=2;ClusterMaxShiftDist=0.155844;ClusterMaxSizeDiff=0.155844;ClusterMaxEditDist=0.233766;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=80;DistBack=4;DistForward=31;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=1:67096523-67096528;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:27:./.:14:8:6:13:./.:10:0:5:3:./.:2:5:./.:.:.:.:.:.
chr1	67624533	HG3_PB_SVrefine2Falcon1Dovetail_343	C	CTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGATTGATAGTGAGACTATCACTATCAGTGAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_305:HG3_PB_SVrefine2PBcRDovetail_328:HG4_PB_pbsv_543:HG3_PB_pbsv_545:HG4_PB_SVrefine2Falcon1Dovetail_357:HG3_PB_SVrefine2Falcon1Dovetail_343:HG2_PB_SVrefine2PBcRplusDovetail_359;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_359:HG3_PB_SVrefine2Falcon1Dovetail_343:HG4_PB_SVrefine2Falcon1Dovetail_357;NumExactMatchSVs=3;ClusterMaxShiftDist=0.354472;ClusterMaxSizeDiff=0.354472;ClusterMaxEditDist=0.364228;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=336;DistBack=30476;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=426;REFWIDENED=1:67624534-67624959;PctSeqSimilarity=0.991;PctSizeSimilarity=0.9911;PctRecOverlap=0.5045;SizeDiff=3;StartDistance=-165;EndDistance=-165;GTMatch=1;TruScore=82;MatchId=177.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:81:1/1:0:18:0:10:./.:0:0:0:0:./.:0:6:./.:1:4:.:.:.
chr1	69055310	HG4_Ill_250bpfermikitraw_572	C	CCATGTAGGCAATGTACCCTTGCTGGAGAATATACCTTCATTGTTCATAAATGTATTATAAATATTATCCTCCATAATAACAGAAGAAGCCCTAAAAAGCAGACAGTTTTACATAAACTGCTAAGTGATTACTACCTTCATTAGAGAT	20	PASS	ClusterIDs=HG3_PB_HySA_780:HG2_10X_SVrefine210Xhap12_409:HG2_PB_HySA_991:HG3_PB_pbsv_548:HG4_PB_HySA_751:HG2_PB_pbsv_540:HG4_PB_pbsv_546:HG4_PB_SVrefine2PBcRDovetail_306:HG4_PB_SVrefine2Falcon1Dovetail_359:HG4_Ill_SVrefine2DISCOVARDovetail_351:HG4_Ill_250bpfermikitraw_572:HG3_PB_SVrefine2Falcon1Dovetail_345:HG2_PB_SVrefine2PBcRplusDovetail_362:HG2_PB_SVrefine2PB10Xhap12_458:HG2_PB_SVrefine2Falcon1plusDovetail_370:HG2_Ill_SVrefine2DISCOVARplusDovetail_403:HG2_Ill_250bpfermikitraw_578:HG2_PB_PB10Xdip_2601:HG2_PB_PB10Xdip_2600;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_578:HG2_Ill_SVrefine2DISCOVARplusDovetail_403:HG2_PB_SVrefine2Falcon1plusDovetail_370:HG2_PB_SVrefine2PB10Xhap12_458:HG2_PB_SVrefine2PBcRplusDovetail_362:HG3_PB_SVrefine2Falcon1Dovetail_345:HG4_Ill_250bpfermikitraw_572:HG4_Ill_SVrefine2DISCOVARDovetail_351:HG4_PB_SVrefine2Falcon1Dovetail_359:HG4_PB_SVrefine2PBcRDovetail_306;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0912052;ClusterMaxSizeDiff=0.0846906;ClusterMaxEditDist=0.217949;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=147;DistBack=92768;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=147;REFWIDENED=1:69055311-69055457;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:./.:0:0:0:0:1/1:0:11:0:11:1/1:0:38:./.:.:.:.:.:.
chr1	70061655	HG2_Ill_manta_117	T	TATAAAGTAGCTTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAATAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2992:HG3_PB_HySA_789:HG3_PB_pbsv_551:HG2_PB_assemblyticsfalcon_757:HG3_PB_HySA_788:HG2_PB_pbsv_546:HG4_PB_SVrefine2Falcon1Dovetail_365:HG3_PB_SVrefine2Falcon1Dovetail_349:HG3_PB_SVrefine2PBcRDovetail_333:HG3_Ill_manta_88:HG3_Ill_MetaSV_111:HG3_Ill_GATKHCSBGrefine_299:HG2_PB_SVrefine2Falcon1plusDovetail_377:HG2_Ill_manta_117:HG2_Ill_MetaSV_127:HG2_Ill_GATKHCSBGrefine_284:HG2_10X_SVrefine210Xhap12_416;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_416:HG2_Ill_GATKHCSBGrefine_284:HG2_Ill_MetaSV_127:HG2_Ill_manta_117:HG2_PB_SVrefine2Falcon1plusDovetail_377:HG3_Ill_GATKHCSBGrefine_299:HG3_Ill_MetaSV_111:HG3_Ill_manta_88:HG3_PB_SVrefine2PBcRDovetail_333;NumExactMatchSVs=9;ClusterMaxShiftDist=0.134375;ClusterMaxSizeDiff=0.134375;ClusterMaxEditDist=0.221875;PBcalls=9;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=319;DistBack=33952;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:70061656-70061670;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=179.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:34:./.:19:7:9:17:1|0:0:9:16:0:0/1:22:14:./.:5:45:.:.:.
chr1	70091056	HG2_PB_SVrefine2Falcon1plusDovetail_378	T	TCAGTCTTAGGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGAACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_759:HG4_PB_pbsv_552:HG2_PB_assemblyticsfalcon_758:HG4_PB_SVrefine2PBcRDovetail_311:HG2_PB_SVrefine2Falcon1plusDovetail_378:HG2_PB_SVrefine2PB10Xhap12_467:HG2_PB_HySA_1000:HG2_Ill_breakscan11_2993;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_378:HG4_PB_SVrefine2PBcRDovetail_311;NumExactMatchSVs=2;ClusterMaxShiftDist=0.261011;ClusterMaxSizeDiff=0.257749;ClusterMaxEditDist=0.313214;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=332;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=1:70091057-70091072;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:./.:8:20:17:5:0|1:25:0:0:7:0/1:27:6:0/1:7:26:.:.:.
chr1	72258947	HG4_Ill_SVrefine2DISCOVARDovetail_370	A	ATATATATATATATATACATAATATATATATACACACACACATATATATACACATATATATTATATATACATATATAATATATTATATATATATAATATATTATATATACATATATACATATATATTATATATACATATATACATATATTATATATACATATATACATATATTATATATACATATATACATATATTATATATACATATATATACATATATATGTATGTGTGTGTATATGTGTGTGTG	20	PASS	ClusterIDs=HG2_PB_HySA_1016:HG3_PB_HySA_800:HG4_PB_pbsv_559:HG4_PB_assemblyticsfalcon_723:HG2_PB_assemblyticsfalcon_767:HG2_Ill_breakscan11_2994:HG3_PB_SVrefine2Falcon1Dovetail_355:HG4_PB_SVrefine2Falcon1Dovetail_371:HG3_Ill_MetaSV_112:HG3_Ill_SVrefine2DISCOVARDovetail_398:HG3_PB_SVrefine2PBcRDovetail_341:HG3_Ill_GATKHCSBGrefine_307:HG2_PB_SVrefine2Falcon1plusDovetail_385:HG4_PB_SVrefine2PBcRDovetail_316:HG4_Ill_SVrefine2DISCOVARDovetail_370:HG4_Ill_GATKHCSBGrefine_330:HG2_PB_SVrefine2PBcRplusDovetail_374:HG2_PB_SVrefine2PB10Xhap12_476:HG2_Ill_SVrefine2DISCOVARplusDovetail_420:HG2_Ill_GATKHCSBGrefine_293:HG2_10X_SVrefine210Xhap12_426:HG2_PB_PB10Xdip_2629:HG2_PB_PB10Xdip_2628:HG2_PB_pbsv_555:HG3_PB_pbsv_560:HG4_PB_HySA_771;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_426:HG2_Ill_GATKHCSBGrefine_293:HG2_Ill_SVrefine2DISCOVARplusDovetail_420:HG2_PB_SVrefine2PB10Xhap12_476:HG2_PB_SVrefine2PBcRplusDovetail_374:HG4_Ill_GATKHCSBGrefine_330:HG4_Ill_SVrefine2DISCOVARDovetail_370:HG4_PB_SVrefine2PBcRDovetail_316;NumExactMatchSVs=8;ClusterMaxShiftDist=0.181443;ClusterMaxSizeDiff=0.181443;ClusterMaxEditDist=0.248447;PBcalls=17;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=246;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:72258948-72258962;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:./.:0:5:0:1:1/1:0:11:0:19:1/1:0:23:./.:.:.:.:.:.
chr1	73594980	HG2_PB_SVrefine2PBcRplusDovetail_380	G	GTGAAGGGGTGGGTTGCCCCTCCACACCTGTGGGTGTTTCTCGTTGGGTGGAACCAGAGACTTGGAAAAGAAAAAGACACAGAGACAAAGTATAGAGAAAGAAATAAGGGGACCCAGGGAACCAGCGTTCAGCATATTGAGGATCCCGCCAGCCTCTGAGTTCCCTTAGTATTTATTGATCATTTTTGGGTGTTTCTCAGAGAGGGGGATGTGGCAGGGTCATAGGATAATAGTGGAGAGAAGGTCAGCAGATAGACACCTGAACAAAGGTCTCTGCATCATAGACAAGGTAAAGAATCAAGTGCTGTGCTTTAGATATGCATACACATAAACATCTCAATGCCTTACAGAGCAGTATTGTTGCCCGCATGTCCCACCTCCAGCCCTAAGGCGGTTTTCCCCTATCTCAGTAGATGGAACATACAATCGAGTTTTATACTGAGACATTCCATTGCCCAGGGATGGGCAGGAGACAGATGCCTTCCTCTTGTCTCAACTGCAAAGAGGCATGCCTTCCTCTTATACTAATCCTCCTCAGCACAGACCCTTTACGGGTGTCGGGCTGGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCTTGCGGCTTTCCACAGTGTATTGTGTCTCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACAGCCCTTAATCCATTTAACCCTGAGTTGACACAGCACATGTTTCAGAGAGCACAGAGCACGGGGTTGGGGGTAAGGTTATAGATTAACAGCATCTCAAGGCAGAAGAATTTGTCTTAGTACAGAACAAAATGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTTCTTTTCCCCACATTTCCCCCTTTTCTTTTAAACAAAACCGCCCTCGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTCGGAGCTGTTGGGTACACCTGCAGACTAACAACAGACAAAACAGGCACACAAGGATTAATATGAAATTTATAATCGTAGTACTTCCGATGGTCTTAACCCAAGTGACAGGGTTAAGATTTGTGAGGCCATCAGCAACTCCAGCGATTGCCTCAGTTCCTGGCACCAAATTTAAATGGGCTTTTGATGTTTTGAAAATTTGTTCTTTTAATTTGGAAATGTCTAAAGTGAGATTATCTTCTCTTCCCTGTAGATGGCGTCTAACCATGTCCCAGTGATGCTCAGACTCATTATAAATTTGGGGTGTAATACAAAAATCTGACATATTCCAGTCACATTGTAACTGGAAACGATGTTCTAAGCTCATGAGCCTGTCTCCCATACAAATGACAGTTTGTCTAAGATCATTAATTTGATTTGCCAATTTTTGATCAATACCAGATTGTGAATTCCACAATCTTGTAGAATTCTTTTGCCAATCATTAACAAAGTTTACTGACTGAACAGAAGAGTGCAACGCAACTCCTGCCACAGCAGCCATAGCTGTGACTGCAATTAATCCCAAAATCACTGTAATTGAAGTAAAAATGAATCTTTTGGATCTATTTAAAATGCCTTTTAATACTTCAGTCAAAATATGGACGGATGGCGAGGCCTCCCATGTTTGGTCCATGGACACAGGGATCCACACGCCTTCTCTTGCTCTCACCAGCAGAATATGGTGCTGCCAATTAAAAGTCGAATCAATGCAAGTAAACAATTTGCAATTTTCACAGGTTATAGTTTGGGAGTCTGGTTTAATAACTATATTTCCTACAACTAGCATATAAGGGGGCTTTACGCAATTTTGTAAAGGGACCGTTAGACTGGAATTTAGGTCGATAGCATAAAATGGCTTACGATCTCTTGTTTCTAAAGTTTGATTTCCAGACCAAATCCTAATGTGGTATGAGGCTACAGTAAGCCCCCATGATTCTGGATGTTCAGGACCAGAAACAGGACTTATTATTTTTGGTCTTGGGGTAGAGATTCCTTTTTCTCCCCATTCCCAACGATAGAAAGACTATAATTTTTTATGCTTATGTTTGTCTAAACTTTCTGTTAAGTCGCTATCAACAGCTGGACTCACTTGTGCACTTGGACACGACTGAGTTTGTCTTGAGCAATTGTGGTAGAATTGACCCCGAGGTGCCCAATCTATAATAGTTCCAAATTCATTGTTTTGTAATATTACCATACTATTGGCCACACATTCTTCCCAAACTAAAACGTCTGTATTTTTTGATCCTTTGGGAATTTCCTTGGGACAAGGTTTCCCCTTAGGTCTAAATTTTAATGATCTTTGATAAGAAAAGTCCTGTAAATAATTTACCCGTGGCCTGAGTGACATCCCGCTTACCATGTGATAAGTGAATCTACTGATGGGACTGACAGTAGATACTTCTACCAATCAATTTTGGACTGCAGGCATTAAGCATCCTGGTGCTCTCCCTAGGCAAATAGGAGGATAATGATACCCAATGGAAATATTTATCATCATCCCTTCTTCCTCAGGTTTGGCAGGGCAGTGATCATCTGTGGGAGCAGGTACCCATACACTATCATTAATATATACTTCTATAAGATTATCCATCCATGTGACTGGTGTTACCATCTCCGTGGAGGCGCTTTTCTTTGCATCTCCGATGGGTTCATTGTAGAACTTCAAATGTCTAGTGGGTATCCAAACAGGAAGCTGATTTTCTCCTGGTGAAACACAAGCAAAACCTCTCCCCCACGTTATCACCTTCCCTATTTCCCACGTCTTATTTTTATTATCTTTCCACCAAATCAATTTTCCTTCATGTGGGCTGTTCCTTTTACCAGTAAGATGTTGTTCTGCAGAAGTAGTAGTCTGATTTCTATAAATGTTTAAAAAATTTAAAGTATAGAGTGCTAGATTAAGTTGCATCTGAGGAGTGGTACACTCCTTACTGTCTCGCCCTTCTTTTTGTTTAACTAATTGAGTTTTGAGTGTTCTATTCGTTCTTTCAACTATGGCCTGTCCTTGGGAATTATAGGGAATTCCTGTTGTTTGTGAAATTTTCCATTGATTTAAGAATTTTTGGGAAGATTTACTACAATATCCTGGTCCATTGTCAGTTTTGATTTTTTCTGGAACTCCCATTACAGCAAAACAAGATAATAAATGTTTTTTAACATGGGAAGTACTTTCTCCTGTCTGGCAAGTTGCCCATATGAAATGTGAATAAGTATCAACTGTTACATGAACATATGACAATCTTCCAAATGAAGGTATATGCGTGACATCCATTTGCCATAATGCATTAGGACACAGACATCTGGGATTAACTCCTGCCTCTTGAGTGGGCAGGTATAAGACTTGACACTGGGTGCAATGTTGTACAATATCTTTTGCCGGTTTCCATGTGACATCAAATTTGTTTTTTAATCCTGCTGCATTTACATGAGTCAAAGCATGAAGTTCTTGTGCTGTTATGAATGCAGATGATACCAGTAGGTCAGCTTGTTCATTTGCTTTAGTCAAAGGCCCTGGTAAATTAGTGTGTGCTTGAATATGAGTAATATAAAATGGGAAATTTCTTTTTCTTACAGTTTGTTGTAATAAATTGAATAGCTGGTTTAACTGATCATCCATGCTATATTTTGATTAGAGCTGTCTCAACATCCCTTGTAGCCTGTACTACATATGCAGAATCTGATATAATATTGATAGGTTGGTCAAAGTCTTGTAACACTGTAATGACTGCAACCAACTCTGCTCTTTGAGCCGATTGATATGGAGTTTTGATTACTCGTTCTTTTGGCCCTGTGTAAGCCGCTTTTCCATTGCTGGAACCATCAGTAAATACTGTTAGAGCATTTTCTAAAGGTTCACGTCTGGTAATTGTAGGTAGAATCCAAGTAGTCAATTTTAAGAACTGGAAGATTTTTGTTTTTGGGTAATGATTATCAATAATTCCCACAAAATTAGCAAGACCAATCTGCCATGCACCAGAATTGATAAAGGCTTGTCTAATTTGTTCCTTGGTTAAAGGGACAACTGTTTTGTCTGGGTCATTTCCACATAGTTTTATTATTCGTAATCTTGTCTGACCAATTAATGTAGCTATTTGATCCAAATACAATGTAAAAGTCTTAACTGTACTGTGAGGAAGGAATGACCACTCCACAAGATCAGTATTTTGAACAATGATGTCTGTTGGAGAATGTGCAGTAGCAAAAATCAAAAGTTGGAGTGGGGCTAAGGGATCTATTCTATTTATTTGCACTGACTGAATTTTTTCTTCCAGTAATTTAATTTCTTTTGTTGCCTCTGGGGTTAACATTCTTTTACTATTTAAGTCTGAGTCTCCTCTTAAGATAGAGAACAAATTTGACATGGCATAAGTAGGAATGCGTAGAGTTGGCCGAATCCAATTAATATCTCCCAGCAATTTTTGAAAATCATTTAGTGTTTTTAATGTGTCTTTTCTTATTTCTATTTTTTGTGGCTTAATTTTTCTATTCTCTATCTGCATCCCTAAATAATGAAAAGGAGTAGAGGTTTGGATCTTATCAGATGCTATTGCCAGTCCTGCGTTGGCAACCTCTGCTTGCAGAAATGTATAACAGTCAATTAATTTATCTCTCGTTTCTGCAGCACACAAAATATCATCAATATAATGAATGATATAACAGTCTGAAAACTTGTCTCTAACTGGTAGAAGAGCTCGACCTACAAAAGTCTGACAAATAGTCGGACTATTAAGCATTCCCTGAGGTAACACTTTCCACTGAAACCTGGTGGCTGGTTCTTTATTATTTATGGCTGGTATAGTAAAGGCAAATTTTTCGCAATCCTGCTCCGCCAGAGGGATGGTAACAAAGCAATCCTTTAGATCGATTATAATTAAAGGCCAGTCTTTTGCGATCATGGCCGAAGAGGGCAACCCAGGTTGGAGAGGCCCCATGGGTTGAATTACGGCGTTTACAGCCCTTAAGTCAGTTAACATATGCCATTTGCTGGATCTCTTCTGAATTACAAACACAGGAGAATTCCAAGGCGAGAATGAAGGCTCAATATGTCCCTTTTCTAACGTTCATTTGCTAATAAATGTAAAGCCTCCAGTTTTTGTTTTGGTAGCGGCCGCTGATTTACCCATACCGGTTTTTCTGTTTTCCAAGTTAATGGTATGGGTTTAGGAGGCTCTACAGTGGCCGCCCCTAAAAAGGATACCCTATTCCTTCTCTTTCTTGATTTATTTTAGCCTCAACTGGAACTGTAATGCCATCTTCATTTTTTCCTAGTCCCTTTCCTGGTATATATCCCATCTTGGTCATGATTTTTTGACTCGTGGGGCTATATAATGGAGCGGGCATAGTGATTTCTGCACCCCATTGTTGTAATAAATCTCGACCCCACAGATTAAGAGGAATTGAAGTAATCATTGGCTGAACAGTACTTTCTTGATTATCTGGCCCTAAACAATGTAAAATCTCAGTACTTTGATACACTTCTGAGGCTGTGCCTATGCCGACAAGTCCTGTAACAGCCTTTTGTTTAGGCCAATTTTTTGGCCACTGATTTAAAGCAATGATAGAGACATCTGCTCCAGTGTCTACTAACCCTTCAAACTGTTTTCCTTGAATAATGGCCTTACACACAGGTCTGTTCTCTGAGACCTGACTTGCCCAATATGCAGCCTTTCCTGTCGGATCAGTGCTTCCAAACCCTCCTGTTCTTTTTATCTCACTAATTCCAACCTTAATATATGGCAGGAGTAATAATTGAGCAATCCTGTCTCCTGGACTGGCACTCCAAGGAATTGAAGAGCTAATAACCAATTGAATTTCACCTTTATAGTCTGAATCAACCACACCAGTATGAATTTGAACTCCCTTTAGATTTAGATTTGATCTTCTCAAGATTAGTCCTACAGTCCCCTCAGGCAGTGGGCCATATACACCTGTGGGGATTTTTTGTGGGGGCTCCCCTGGAAGCAGAGATACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCTTGTGGCGGGGGACAATTGTTGTATTGTGGTAACTGGCTTATTCCCTGAGGTACTTGGGACAGTGGGGGTTGTTGTCCCTGAAAACCCTGAGGAACAAATGGCTGAATTGGGAATGCCCCAGTTTGTTGCAGGGCCTGAGGCTGGCCCCTTTGCTCATTTCCCGACAATGGTTGCCCATTTCTATCAAATTTAGAACAACATTGACTAGCCCAATGTTTTCCTTTTTTACATCTTGGACATAAGTCAGGTGGCTCTCTACCTGTTGTTGTAGTAGCTTGAATACTTATATTCTGTTTATTTAAGACTGGACAATTCTTTTTTAAATGACCAATTTGACCACAATTATAACATTTTCCTCCAAATGTTCTAACCTGTCCTCCTAAAACAACTCCCGCTATTGCTTGAGCCATAAGCGTAGCTTTATGCATAGCTCCTCCGATTCCATCACAGCCTTTTACATACTCTGAGATTACATCTGATCCTGTGGGAACCTTTCCTTTTAATGGCTTAATGGCCAATTGACACTCAGGATTGGCATTTTCGTATGCCATCAACTCCACTATGACCTTACAGGCTTTTTCATCGGCAATTGACTTTTGAGCAACATCTTGGAGCCTTGCCACAAAATCAGGGTAGGGCTCTTTTGAATCTTGTCTTACTGTATTAAATGAGGGGCAGGTGATTCCTGGGTCTTGGATTTTTTTCCCAGGCTCTAAGGCAGATAGCTCTAATTTGCTCAATGGCCTCATTTTGCATTAATGCTTGTTGACTAATAGTGCTCCAATTTTGACCTGTTCCTAATAGTTGATCTGCATCTATGTTAACTGGAGGATTGGCAGCCCTATTTCTTCAGACCTGTTCTTGTGCCCCATCAATCCACCAAGTCTTAAATTGTAAGAATTGAGAGGGTGAGAGAGACGATTTTGCCAGAATCTCCCAATCATAAGGAATGAGTCTATGTCCATGAGCAATGGAATCTAACAATGTCCTCATATAAGGGGAGTTGGGTCCATACTGTTTTACTCCCTCTTTCATATCTTTTAGCATTTTTATCGAAAAAGACTTGTATCTGGCCTCAACTGTGAGAGGCTCTCCCTCTTGGGCTCCTTCTCTAGGTGACATCGGTTCTAACATTACTGGGAATTGCCACGCCTCGGTATCTCCTTCCTTTCTTGACTTATCAATAATTTCATGTAATTCACTACCCTGTCTACTAGGTGGTGCCGTAGGATTAAGTCTCCTAGTGGGCGGCTGAGGGTATGGCGCCCTGCCCTGTGGTGCTGGAGCATTTCTGGACATCCATACTGACTTTCTGGGGGTGGCCGATACTGAAGTTCGGCCGGCGGCCAGTATTGATAAGCTACTGGTGGTTGGGTCTTATTTTCTTTAACCTGTGTTTGAGGTTGTAATGTTACGGGCATCTGACCTGCTGGAAGAGGACTTGGCCCTCATGGTTTAGACTCTGATGGCCCCACTAATTCTGGACATTTTCCTTCTAATTTTAACGTTTCAGGATATATCACCTCCTGTAATTGATTATAGTCAACATTTTGCATTGACTGAGCCATTACCAGCTCTGCTACATATTTGCAATGTAAACTTTCCATTTCTTTCTGGGATTTTTTCCCTGTCTTTTCTTTACAATCTATTACACAGCTTCCAGGGGCATCAGAAACTGAAACACTATCTTCTTCTGCTTGAAATTGTTCTAAAGCTGCTTTAATAATGGCCCAATCATTCCATACTGTAAGTGGAATGATATTACCCTTCGTACCTGCTTGTTTTAGTTCCTCGCCAATTCTTTTCCAGTCTTTTAGATCTAAAGTTCCTTGTTCTGGAAACCATGGGCAAAATTGTTCTATTGTTTGAAATAGCTTGATTAGATTTTTTGCAGATACTCTAACTCCCCCTCTTTTTAAAAGAATTGTAATAAAGCTGAGATAAGAGGCACATTTACTTTTAGTTTTAGTTTGCCCCATTGTCACCCTAGCTTCTTCCGAGCGCACAAGCTTACCGTAAGACTGACTGTAGATGTACTCGGGATCTCTCGTCGACTTGTCCTCAATGACCACGCTGTAGCGTACCTTCACCCTAGAGAAAAGCCTCCACGTTGGGCACCAGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_321:HG2_PB_SVrefine2PB10Xhap12_483:HG2_PB_SVrefine2PBcRplusDovetail_380:HG2_PB_SVrefine2Falcon1plusDovetail_389;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_380;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00524614;ClusterMaxSizeDiff=0.00524614;ClusterMaxEditDist=0.0273304;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=8217;DistBack=138524;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=968;REFWIDENED=1:73594981-73595948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:76:1/1:1:25:0:22:./.:0:0:0:0:./.:0:3:1/1:0:960:.:8160:.
chr1	74182157	HG4_Ill_GATKHCSBGrefine_341	T	TTCAATGTCTCATTACCAGCTTCTGCTCCTCTTGCAAACTTCTCAGAGAGTGTTTCACTTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_436:HG4_PB_pbsv_573:HG2_PB_HySA_1032:HG2_PB_pbsv_566:HG4_Ill_svaba_595:HG4_Ill_manta_113:HG4_Ill_SVrefine2DISCOVARDovetail_378:HG4_Ill_Krunchall_635:HG4_Ill_GATKHC_776:HG4_Ill_GATKHCSBGrefine_341:HG4_Ill_250bpfermikitraw_614:HG4_Ill_150bpfermikitraw_590:HG2_PB_SVrefine2Falcon1plusDovetail_393:HG2_Ill_svaba_596:HG2_Ill_SVrefine2DISCOVARplusDovetail_430:HG2_Ill_Krunchall_604:HG2_Ill_GATKHC_770:HG2_Ill_GATKHCSBGrefine_302:HG2_Ill_250bpfermikitraw_618;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_436:HG4_Ill_svaba_595:HG4_Ill_manta_113:HG4_Ill_SVrefine2DISCOVARDovetail_378:HG4_Ill_Krunchall_635:HG4_Ill_GATKHC_776:HG4_Ill_GATKHCSBGrefine_341:HG4_Ill_250bpfermikitraw_614:HG4_Ill_150bpfermikitraw_590:HG2_PB_SVrefine2Falcon1plusDovetail_393:HG2_Ill_svaba_596:HG2_Ill_SVrefine2DISCOVARplusDovetail_430:HG2_Ill_Krunchall_604:HG2_Ill_GATKHC_770:HG2_Ill_GATKHCSBGrefine_302:HG2_Ill_250bpfermikitraw_618;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0650406;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.243902;PBcalls=4;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=60;DistBack=27616;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=62;REFWIDENED=1:74182158-74182219;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=183.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:29:./.:10:23:21:2:./.:18:0:2:29:0/1:21:26:./.:.:.:.:.:.
chr1	74437711	HG3_Ill_150bpfermikitraw_585	C	CATATAAATATATATTAAATATATATATATATATTAAATATATATAAATAT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_2641:HG2_PB_HySA_1038:HG4_PB_pbsv_576:HG2_PB_pbsv_569:HG4_PB_assemblyticsfalcon_743:HG2_PB_assemblyticsfalcon_787:HG3_Ill_svaba_626:HG3_PB_pbsv_575:HG3_Ill_GATKHC_823:HG3_Ill_GATKHCSBGrefine_320:HG3_Ill_150bpfermikitraw_585:HG2_Ill_svaba_598:HG2_Ill_scalpel_464:HG2_Ill_GATKHC_774:HG2_Ill_GATKHCSBGrefine_305:HG4_Ill_scalpel_427:HG4_Ill_GATKHC_780:HG4_Ill_GATKHCSBGrefine_343:HG4_Ill_250bpfermikitraw_617:HG3_Ill_Spiral_504:HG3_Ill_250bpfermikitraw_619:HG2_Ill_250bpfermikitraw_623:HG2_PB_PB10Xdip_2642;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_305:HG2_Ill_GATKHC_774:HG2_Ill_scalpel_464:HG2_Ill_svaba_598:HG3_Ill_150bpfermikitraw_585:HG3_Ill_GATKHCSBGrefine_320:HG3_Ill_GATKHC_823:HG3_Ill_svaba_626;NumExactMatchSVs=8;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.288288;PBcalls=8;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=32033;DistForward=90;DistMin=90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=26;REFWIDENED=1:74437710-74437738;PctSeqSimilarity=0.9808;PctSizeSimilarity=0.9615;PctRecOverlap=0.9623;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:49:1/1:2:23:5:16:./.:0:0:0:1:./.:3:21:./.:.:.:.:.:.
chr1	74471642	HG2_PB_assemblyticsfalcon_789	AAAAATTTAGTCT	CGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCTGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2996:HG2_PB_pbsv_570:HG4_PB_assemblyticsfalcon_744:HG4_PB_pbsv_577:HG4_PB_HySA_790:HG2_PB_assemblyticsfalcon_789:HG2_PB_HySA_1040:HG2_PB_SVrefine2PBcRplusDovetail_386:HG4_PB_SVrefine2Falcon1Dovetail_378;NumClusterSVs=9;ExactMatchIDs=HG2_PB_assemblyticsfalcon_789;NumExactMatchSVs=1;ClusterMaxShiftDist=0.132394;ClusterMaxSizeDiff=0.129577;ClusterMaxEditDist=0.204301;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=331;DistBack=-9;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:74471655-74471641;PctSeqSimilarity=0.9597;PctSizeSimilarity=0.9194;PctRecOverlap=0.9501;SizeDiff=-29;StartDistance=1;EndDistance=13;GTMatch=0;TruScore=94;MatchId=185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:17:31:./.:7:8:4:10:./.:30:0:6:4:0/1:42:6:0/1:14:40:.:.:.
chr1	75192903	HG2_PB_pbsv_574	T	TTTTCTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCAATTGTGCAGGTAGTTACATATGTACATGTGCCATGCTGGTGCCGCTGCAACCACTAATGTGTCATCTAGCATAGGGTAATCTCCCAATGCTATCCTCCCCCTCCCCGACCCACCCCAGTCCCAGAGTGTGAAATATCCCTTCCTTTCCATCGTGAAATTCATTGTTCAATCCCACTATGAGTGAGAATCATTGCGGTGTTTGGTTTTTTGTCTGGGATAGTTTACTGAGAATATGGTTTTCAATTTCATCCATGTCCTAAACATGGATATGAACTCATCATTTTTATGGCTGCATATTTCCATGGGTGTATATGTGCCACATTTTCTTTCTAACCAGTCTATCATTGTGCACATTTGGTTGGTTCCAAGTCTTTGCTATTGTGATAGGTGGCGCAATAAACTACGTGTGCATGGCTTTTATTAGCAGCATGATGTTATACTCATCTTTGGGTATATTACCCAGTATGGGAATGGCTGGGTCAAGTGTATTTCAGTCTACGATCCCGGAGAATCGCCACACTGACTTCCACATGGTTGGAACTAGTTAACAGTCCCACCAAGCAGTGTAAATGGTTCATCTGCCGCTCCTCTCCAGCATCTGTTGTTTCCTGATTTTTAATGATTGCATTCTAACTGGTGTAGATGATATCTCATAGGGTTTGATTTGCATTTTCTCCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTGAGAAGTGTCTGTTCATGTCTGTCCACTTTTTGAGGGGTGTTTGTTTTTTTCTGTAAATGTTGTTTGGAGTTCATTGTAGATTCTGGAATATTAGCCCTGTTGTCAGATGAGTAGTTTGCAAAAATTTTCTCCCATGTTGTAAGGTTGCCTGTTCACTCTGAGGTAGTTTCTTTTTGCTGTGCAGAAGCTCTTTAAGTTTAATTAGATCCCATTTGTCAATTTGTCTTTTGTTGAACTAATTCGCCTTTTGGTGTTTTTGAACATGAAGGTCCTTCGCCCACGGCCTATGTCCTGAATGGTAATGGCCTAGGTTTTCTTCTAGGGTTTTGTTATATGGTCTTTAGGGTTCTACAAGTTTAAATCGTTTAATCCATCTTGACAACTTGATTTTTGTATAGAGGTGTTAAGGAAGGGATCCAGTTTCACTTTCTAGCATATGTGCTATAGCCAGTTTCTCAAGCACCATTTATTAATTAGGGAACTCCTTTCCCATTGCGTGGTTTTTCTCAGCGTTTGTCAAGATCAGATAGTTTGTAGATATGCGGCATTATCTGAGGGCTCGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTACCCTGTAGTATAGTTGAAGTCAGGGTAAGTGTTGATGCTCCAGCTTTTGTTCTTTTGGCTTAGGATTGACTTGGCATATGCGGCTCTTTTTTTGGTTCATATGAACTTTAAAGTAGTTTTTTCCAATTCGTAAGAAAGTCATTGGGTAGCTTGATGGGGATGGCATTGAATTGTAAATTACTGGATATGGCCATTTTTCCATTTGAATTCTTTCCTACCATTGAGCAATGGAATGTTTTCTCCATTTGTTTGTCTCCTCTTTTTATTTCCTTGAGCAGTGGTTGTAGTTCTCCTGAGAGAGTCCTTCACATCCCTTGTTAAGTTGGATTCCTAGGTTTTTATTATTCTCTTTAAGCAATTGTGAATGGGGTTCAACCCATGACTGCTCTCTGTTTTGTCTGTTTGTTGGTGTATAAAAATGCTTGTGATTTTGTACAGTTGATTTTGTATCCTGAGACTTGCTGAAGTTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATGCATTCGTCTGCAAACAGGGACAAATTTGACTCCTCTTTTTCCTCATTGAATACCCTTATTCCTCTCTCCTGCCTGATTGCCCTGGCCCAGAACTCTCAACACATGTTGAATAGGCAGCGTGAGAGAGGGCATCCATGTCTTTTGCCAGTTTTCCAAAGGAATGCTTCCAAGCTTTTTGCTCATTCAGTATGATATTGGCTGTGGTTTGTAATAAGATAGCTCTTAATTAATTTTGAATGTCCCATCAATACGCTAATTTATTGAGAGTTTTTAGCATGTAAGGTTGCTTGAATTTTGTCAAAGGCTTTTCTGCACTATCTGAGATAATTCAGCTGGTTTTTTGTCTTTGGCTCTGTTCTATATGCTGGATTACATTTATTGATTTGCGTATATGAACCAGCCTTGCAGTCCCAGGATGAGCCCACTTTGATCATGGTGGATAACTTTTTGATGTTGCTGATTCGGTTTGCCAGTTATTGTTACTTGAGGATTTTTTTGCAATATATGTTCATCAAGGATATTGGTCTAAAATTCCTTTTGTTGGTTGTGTCTCTCCGGTTTGGTATAGAAATGATGCTGGCCTAAAAATGAGTTAGGGCAGATTCCTCTTTTCTATTGATTGGACTAGTTTCAGAAGGAAATGGTACCAGTTCTCCATGTAGCCCTCTGGTAGAATTCGGCTGTGAATCCTCTGGGTCTGGACTCTTTTGGGTTGGTAAACTAACTTTGATATGCCACAATTTTCAGAGCCCTGTTTTATTGGTCTATTTCAGAGATTCCAACTTCCTTCCTGTTTAAGTCTTGGGAGAGTGTTGTGTCGAGGAATGTATCCAATTTCTTCTTAGATTTCCTAGTTTATTTGGTAGCAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTATTGTGTCTAATGTTGCATTCTTCTCTCTCTTTTTCTTTTATTAGTCCTTGCTACGGTCTATCCAATTTTGGTTGATCCTTTTCAAAAAAACCAGCTCCTGGATTCATTGATTTTTGAAGGGGTTTTTGTTCTCTATGTCTCTTCAGTTCTGCTCTGGATCTTTAGTTATTTCTTGCTCTGCTAGCTTTGATGTGTTTGCTCTTGCTTTTCTAGTTTTTAATTGTGATAGTAGGGTGTCAATTTGGATCTTCTCCTGCTTTCTCTTGTCAGCATTTAGTGCTATAAATTTCCCTCTACCCACTGCTTTGAATGCGTCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAAATTTTATTTTGCCTCATTCGTTATGTATCCGTAGTCATATTCAGGAGCAGGTTGTTCAGTTTCCCAATTGTAGTTGAAGCGGCTTGAGTGAGCATTCTTAATCTGAGCTCTAGTTTTGATTGCACTGTGGCTGCAGGAGATAGTTTGTTATAATTTCTTGTTCTTTTCATTTGCTGAGGAGAGCTTTAACTCTCCAACAATTGGATTCAATTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGATATCTGTTTGATTGGGGTGAGAGTTCTGTGATGTCTATTAGGTCTGCTTGGTGCAGAAGCTGAGTTCCATTCTGGGTATCCTTGTTGACGTTTCTTTCTGTTGATCTGTCTAATGTTGACGTGGGGTGTTAAGTCCCGCATTATTATGTGTGGGAGTCTATAGTCTCTTTGTAGGTCACTCAGCGACTTGCTTTATGAATCTGGGTGCCTCCGTATTAGTTCA	10	PASS	ClusterIDs=HG2_PB_HySA_1043:HG4_PB_pbsv_580:HG2_PB_assemblyticsPBcR_784:HG2_PB_HySA_1044:HG2_PB_pbsv_574:HG3_PB_pbsv_578:HG4_PB_assemblyticsfalcon_748:HG2_PB_assemblyticsfalcon_792:HG2_PB_PB10Xdip_2645:HG4_PB_SVrefine2PBcRDovetail_327:HG2_PB_SVrefine2Falcon1plusDovetail_397:HG2_PB_SVrefine2PBcRplusDovetail_389:HG2_PB_SVrefine2PB10Xhap12_490:HG3_PB_SVrefine2PBcRDovetail_354;NumClusterSVs=14;ExactMatchIDs=HG2_PB_pbsv_574;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0596062;ClusterMaxSizeDiff=0.0596062;ClusterMaxEditDist=0.204432;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=3719;DistBack=-4;DistForward=4823;DistMin=-4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=1:75192890-75192907;PctSeqSimilarity=0.948;PctSizeSimilarity=0.9976;PctRecOverlap=0.9952;SizeDiff=9;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=98;MatchId=186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:20:63:0|1:21:0:0:55:0|1:48:0:0:7:0/1:21:5:0/1:140:54:.:3630:.
chr1	76856628	HG2_PB_HySA_1075	T	TGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2998:HG2_PB_pbsv_586:HG4_PB_pbsv_592:HG3_PB_SVrefine2PBcRDovetail_363:HG3_PB_SVrefine2Falcon1Dovetail_370:HG2_PB_HySA_1075:HG2_PB_SVrefine2PBcRplusDovetail_399:HG2_PB_SVrefine2PB10Xhap12_502:HG2_PB_SVrefine2Falcon1plusDovetail_406:HG2_10X_SVrefine210Xhap12_451:HG3_PB_pbsv_591:HG3_PB_HySA_840:HG4_PB_HySA_814:HG2_PB_PB10Xdip_2682:HG2_PB_PB10Xdip_2681;NumClusterSVs=15;ExactMatchIDs=HG2_PB_HySA_1075:HG3_PB_SVrefine2Falcon1Dovetail_370;NumExactMatchSVs=2;ClusterMaxShiftDist=0.115445;ClusterMaxSizeDiff=0.115445;ClusterMaxEditDist=0.18429;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=322;DistBack=87951;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=1:76856629-76856642;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9877;PctRecOverlap=0.9878;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:1:23:0:19:./.:0:3:0:6:1/1:0:10:1/1:2:63:.:.:.
chr1	77468951	HG4_PB_SVrefine2Falcon1Dovetail_383	G	GATCTTTGTTGGTTTAAAGTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCGCCCGCCACCGGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTAAGGCGTGAGCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_383:HG3_PB_pbsv_595:HG4_PB_pbsv_597:HG2_PB_pbsv_590;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_383;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0595745;ClusterMaxSizeDiff=0.0595745;ClusterMaxEditDist=0.249275;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=345;DistBack=156963;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=1:77468952-77468977;PctSeqSimilarity=0.9833;PctSizeSimilarity=0.9971;PctRecOverlap=0.9597;SizeDiff=-1;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=98;MatchId=188.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:21:./.:12:5:10:12:./.:0:1:17:0:0/1:27:5:0/1:7:19:.:.:.
chr1	77476395	HG2_10X_SVrefine210Xhap12_456	G	GTGGCTCCAGGACACCCCAGCACTCTGGACTAAACACACTGCACCACTCCTCTCCTTAAAGATCTTAAGGATTGTGCTCTAATTAGTTTGGAAATGGAATTTCTTAGACTATTTCTAAAAGCAGCTGCAGCCTGGGGACAAATTGACTAAATTCACCAGTTCTCCTGAAAATGATATTTGAAAGGAAAGTTGAGCTGCTTCTATCTTCCCAGAGAAATCTACATGTCATTCAGATGTTGGAGACCCTCAAGAGGCAGAAATGTCTTCATCCCCTGCCGTTTGGGTACTGACTAAAACCGTTGATCCTTTTCCTTGAAGTCTGAGGTTCTGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_374:HG2_PB_pbsv_591:HG2_PB_HySA_1082:HG2_PB_PB10Xdip_2684:HG2_PB_SVrefine2PB10Xhap12_505:HG2_PB_HySA_1081:HG2_PB_SVrefine2Falcon1plusDovetail_410:HG2_10X_SVrefine210Xhap12_456;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_456:HG2_PB_SVrefine2Falcon1plusDovetail_410;NumExactMatchSVs=2;ClusterMaxShiftDist=0.127527;ClusterMaxSizeDiff=0.127527;ClusterMaxEditDist=0.199067;PBcalls=7;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=330;DistBack=-330;DistForward=332;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=332;REFWIDENED=1:77476396-77476727;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.997;PctRecOverlap=0.9426;SizeDiff=1;StartDistance=-18;EndDistance=-18;GTMatch=0;TruScore=97;MatchId=189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:38:./.:22:12:11:23:./.:0:4:0:25:./.:1:15:./.:2:11:.:.:.
chr1	77577912	HG2_Ill_breakscan11_2999	T	GATAATCTTAACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2999:HG2_PB_pbsv_594:HG3_PB_pbsv_598:HG2_PB_assemblyticsfalcon_818:HG2_PB_HySA_1086:HG2_Ill_MetaSV_146:HG2_PB_SVrefine2PB10Xhap12_507:HG2_Ill_GATKHCSBGrefine_323:HG2_PB_SVrefine2Falcon1plusDovetail_411:HG2_PB_HySA_1085;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_breakscan11_2999;NumExactMatchSVs=1;ClusterMaxShiftDist=0.17284;ClusterMaxSizeDiff=0.17284;ClusterMaxEditDist=0.193126;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:77577913-77577911;PctSeqSimilarity=0.994;PctSizeSimilarity=0.988;PctRecOverlap=0.988;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:43:0|1:42:2:2:41:./.:32:0:1:4:0/1:42:18:0/1:5:31:.:.:.
chr1	77634314	HG2_Ill_MetaSV_147	T	TAAAATTGCTTCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3000:HG2_PB_pbsv_595:HG3_PB_pbsv_599:HG2_PB_assemblyticsfalcon_821:HG2_PB_SVrefine2Falcon1plusDovetail_412:HG3_Ill_MetaSV_127:HG3_Ill_GATKHCSBGrefine_338:HG2_Ill_MetaSV_147;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_MetaSV_147:HG3_Ill_GATKHCSBGrefine_338:HG3_Ill_MetaSV_127;NumExactMatchSVs=3;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.171429;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=48738;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:77634315-77634327;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:38:0|1:41:1:2:44:0|1:25:0:0:9:0/1:31:17:0/1:7:29:.:.:.
chr1	78498181	HG4_Ill_GATKHC_821	G	GTGTGTATATATATATATATATATATATATATATATATATATATATATGTATATATATA	20	PASS	ClusterIDs=HG4_Ill_GATKHC_821:HG2_PB_HySA_1104:HG2_PB_pbsv_598;NumClusterSVs=3;ExactMatchIDs=HG4_Ill_GATKHC_821;NumExactMatchSVs=1;ClusterMaxShiftDist=0.112;ClusterMaxSizeDiff=0.112;ClusterMaxEditDist=0.283465;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=-1;DistForward=34;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=67;REFWIDENED=1:78498151-78498217;PctSeqSimilarity=0.9439;PctSizeSimilarity=0.8788;PctRecOverlap=0.4179;SizeDiff=-8;StartDistance=-35;EndDistance=-35;GTMatch=0;TruScore=74;MatchId=192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:22:0|1:6:1:0:7:./.:0:0:0:3:0/1:9:14:./.:.:.:.:.:.
chr1	79108844	HG2_PB_assemblyticsfalcon_833	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCGAAAGCAAGAGTTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_414:HG3_PB_pbsv_606:HG2_PB_assemblyticsfalcon_833:HG2_PB_pbsv_601;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsfalcon_833;NumExactMatchSVs=1;ClusterMaxShiftDist=0.060241;ClusterMaxSizeDiff=0.060241;ClusterMaxEditDist=0.123894;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=160;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:79108845-79108845;PctSeqSimilarity=0.9752;PctSizeSimilarity=0.9467;PctRecOverlap=0.8817;SizeDiff=-9;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=93;MatchId=193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:30:0|1:45:0:1:29:0|1:31:0:0:9:0/1:28:6:./.:.:.:.:.:.
chr1	79582075	HG2_10X_SVrefine210Xhap12_464	A	AGATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_2698:HG3_PB_pbsv_609:HG2_PB_pbsv_604:HG2_PB_assemblyticsfalcon_840:HG4_PB_pbsv_607:HG4_PB_HySA_839:HG3_PB_HySA_859:HG2_PB_HySA_1117:HG4_PB_SVrefine2PBcRDovetail_343:HG2_PB_SVrefine2Falcon1plusDovetail_416:HG4_Ill_manta_124:HG4_Ill_MetaSV_154:HG4_Ill_GATKHCSBGrefine_374:HG3_Ill_MetaSV_131:HG3_Ill_GATKHCSBGrefine_348:HG2_PB_SVrefine2PBcRplusDovetail_406:HG2_PB_SVrefine2PB10Xhap12_511:HG2_Ill_manta_137:HG2_Ill_MetaSV_150:HG2_Ill_GATKHCSBGrefine_336:HG2_10X_SVrefine210Xhap12_464:HG2_PB_PB10Xdip_2699;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_464:HG2_Ill_GATKHCSBGrefine_336:HG2_Ill_MetaSV_150:HG2_Ill_manta_137:HG2_PB_SVrefine2PB10Xhap12_511:HG2_PB_SVrefine2PBcRplusDovetail_406:HG3_Ill_GATKHCSBGrefine_348:HG3_Ill_MetaSV_131:HG4_Ill_GATKHCSBGrefine_374:HG4_Ill_MetaSV_154:HG4_Ill_manta_124;NumExactMatchSVs=11;ClusterMaxShiftDist=0.107937;ClusterMaxSizeDiff=0.107937;ClusterMaxEditDist=0.204019;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=307;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=1:79582076-79582082;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9935;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:82:1/1:0:41:0:27:1/1:0:11:0:7:1/1:0:37:1/1:2:89:.:.:.
chr1	79650144	HG4_Ill_SVrefine2DISCOVARDovetail_406	C	CAACTTGGATCAGTGGAGTCAGAAGGTTACATTTGTTACAGAGCTGAGGAATGAAAAAAGAGTAGAGTAATACTGTCAAAACAAAACAAAACAAAAAGAAGAATTAAACTGCATCTACTTTTGCTGCAGAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_2700:HG2_10X_SVrefine210Xhap12_465:HG3_PB_HySA_860:HG3_PB_pbsv_610:HG2_PB_pbsv_605:HG4_PB_SVrefine2PBcRDovetail_344:HG4_Ill_SVrefine2DISCOVARDovetail_406:HG4_Ill_250bpfermikitraw_661:HG3_Ill_SVrefine2DISCOVARDovetail_436:HG3_Ill_250bpfermikitraw_667:HG2_PB_SVrefine2PBcRplusDovetail_407:HG2_PB_SVrefine2PB10Xhap12_512:HG2_PB_SVrefine2Falcon1plusDovetail_417:HG2_Ill_SVrefine2DISCOVARplusDovetail_461:HG2_Ill_250bpfermikitraw_677:HG2_PB_HySA_1119:HG4_PB_HySA_841:HG2_PB_PB10Xdip_2701;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_677:HG2_Ill_SVrefine2DISCOVARplusDovetail_461:HG2_PB_SVrefine2Falcon1plusDovetail_417:HG2_PB_SVrefine2PB10Xhap12_512:HG2_PB_SVrefine2PBcRplusDovetail_407:HG3_Ill_250bpfermikitraw_667:HG3_Ill_SVrefine2DISCOVARDovetail_436:HG4_Ill_250bpfermikitraw_661:HG4_Ill_SVrefine2DISCOVARDovetail_406:HG4_PB_SVrefine2PBcRDovetail_344;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.209386;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=130;DistBack=30150;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=130;REFWIDENED=1:79650145-79650274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:63:./.:0:0:0:0:1/1:1:6:1:7:1/1:2:42:./.:.:.:.:.:.
chr1	80271154	HG3_Ill_SVrefine2DISCOVARDovetail_440	C	CTCTAGAGACCTTCCTATTTCTTGCTTTTAGTTCATTGGCAAATGTCTTTCTTGATTGGAAATGTGATACTCATTTTCAAGACTACTCTATCTGTAATATCTCTGCAATCTTATTTTGATTATTCTACTAAAAATGTACTT	20	PASS	ClusterIDs=HG2_PB_pbsv_607:HG2_Ill_breakscan11_3001:HG3_PB_pbsv_613:HG2_PB_HySA_1128:HG4_PB_HySA_848:HG4_Ill_manta_127:HG4_Ill_SVrefine2DISCOVARDovetail_410:HG4_Ill_MetaSV_158:HG4_Ill_GATKHCSBGrefine_379:HG3_Ill_Spiral_542:HG3_Ill_SVrefine2DISCOVARDovetail_440:HG3_Ill_MetaSV_133:HG3_Ill_manta_107:HG3_Ill_GATKHCSBGrefine_351:HG2_Ill_manta_138:HG2_Ill_SpiralSDKrefine_482:HG2_Ill_SVrefine2DISCOVARplusDovetail_463:HG2_Ill_GATKHCSBGrefine_339:HG2_10X_SVrefine210Xhap12_467:HG4_PB_pbsv_613;NumClusterSVs=20;ExactMatchIDs=HG3_Ill_MetaSV_133:HG3_Ill_SVrefine2DISCOVARDovetail_440:HG3_Ill_Spiral_542:HG4_Ill_GATKHCSBGrefine_379:HG4_Ill_MetaSV_158:HG4_Ill_SVrefine2DISCOVARDovetail_410:HG4_Ill_manta_127;NumExactMatchSVs=7;ClusterMaxShiftDist=0.102041;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.238411;PBcalls=5;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=140;DistBack=24520;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=1:80271155-80271156;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:20:0|1:32:7:0:18:0|1:20:0:0:33:0/1:28:14:./.:.:.:.:.:.
chr1	80545256	HG2_Ill_svaba_646	C	CTTAAATTATATAATGCTTACATTCCAGTTAGTTTATATTACAAAATATATTACAAAAGAATGTGGCTGACCATGCTCAAAATGACACAATTTTTCAATTATATAAATATTTGAAAATTGTCTAAGGGAGTTGGAACAGCAAAAGAAATCACAGGCCGGTGCAGAATCTTTCTGAGTAACAATCACTTATATTTACTCATCATT	20	PASS	ClusterIDs=HG3_PB_pbsv_616:HG2_PB_PB10Xdip_2703:HG2_Ill_breakscan11_3002:HG4_PB_pbsv_615:HG2_PB_pbsv_608:HG4_PB_SVrefine2PBcRDovetail_351:HG4_Ill_svaba_646:HG4_Ill_manta_128:HG4_Ill_SVrefine2DISCOVARDovetail_411:HG4_Ill_MetaSV_159:HG4_Ill_GATKHCSBGrefine_380:HG4_Ill_Cortex_106:HG3_Ill_svaba_677:HG3_Ill_manta_108:HG3_Ill_SVrefine2DISCOVARDovetail_441:HG3_Ill_MetaSV_134:HG3_Ill_GATKHCSBGrefine_352:HG3_Ill_Cortex_118:HG2_PB_SVrefine2PBcRplusDovetail_411:HG2_PB_SVrefine2PB10Xhap12_514:HG2_PB_SVrefine2Falcon1plusDovetail_420:HG2_Ill_svaba_646:HG2_Ill_manta_139:HG2_Ill_SVrefine2DISCOVARplusDovetail_465:HG2_Ill_MetaSV_153:HG2_Ill_GATKHCSBGrefine_340:HG2_Ill_Cortex_201:HG2_10X_SVrefine210Xhap12_468:HG2_PB_assemblyticsfalcon_854;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_468:HG2_Ill_Cortex_201:HG2_Ill_GATKHCSBGrefine_340:HG2_Ill_MetaSV_153:HG2_Ill_SVrefine2DISCOVARplusDovetail_465:HG2_Ill_manta_139:HG2_Ill_svaba_646:HG2_PB_SVrefine2Falcon1plusDovetail_420:HG2_PB_SVrefine2PB10Xhap12_514:HG2_PB_SVrefine2PBcRplusDovetail_411:HG3_Ill_Cortex_118:HG3_Ill_GATKHCSBGrefine_352:HG3_Ill_MetaSV_134:HG3_Ill_SVrefine2DISCOVARDovetail_441:HG3_Ill_manta_108:HG3_Ill_svaba_677:HG4_Ill_Cortex_106:HG4_Ill_GATKHCSBGrefine_380:HG4_Ill_MetaSV_159:HG4_Ill_SVrefine2DISCOVARDovetail_411:HG4_Ill_manta_128:HG4_Ill_svaba_646:HG4_PB_SVrefine2PBcRDovetail_351;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0668258;ClusterMaxSizeDiff=0.0620525;ClusterMaxEditDist=0.197183;PBcalls=9;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=203;DistBack=3440;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:80545257-80545257;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:95:1/1:0:8:0:5:./.:0:0:2:25:1/1:0:23:./.:.:.:.:.:.
chr1	81168918	HG2_Ill_GATKHCSBGrefine_344	T	TGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAA	20	PASS	ClusterIDs=HG2_PB_HySA_1142:HG4_PB_HySA_861:HG3_PB_HySA_878:HG3_PB_pbsv_619:HG4_PB_pbsv_620:HG2_PB_pbsv_611:HG4_Ill_Krunchall_710:HG4_Ill_GATKHC_853:HG4_Ill_GATKHCSBGrefine_385:HG4_Ill_250bpfermikitraw_684:HG3_Ill_Krunchall_696:HG3_Ill_GATKHC_891:HG3_Ill_GATKHCSBGrefine_354:HG3_Ill_250bpfermikitraw_680:HG2_Ill_Krunchall_676:HG2_Ill_GATKHC_853:HG2_Ill_GATKHCSBGrefine_344:HG2_Ill_250bpfermikitraw_693:HG2_PB_assemblyticsfalcon_861;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_693:HG2_Ill_GATKHCSBGrefine_344:HG2_Ill_GATKHC_853:HG2_Ill_Krunchall_676:HG3_Ill_250bpfermikitraw_680:HG3_Ill_GATKHCSBGrefine_354:HG3_Ill_GATKHC_891:HG3_Ill_Krunchall_696:HG4_Ill_250bpfermikitraw_684:HG4_Ill_GATKHCSBGrefine_385:HG4_Ill_GATKHC_853:HG4_Ill_Krunchall_710;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0888889;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.235294;PBcalls=7;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=2740;DistForward=25219;DistMin=2740;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=65;REFWIDENED=1:81168919-81168983;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:37:0|1:44:3:3:35:./.:9:0:1:11:0/1:19:28:./.:.:.:.:.:.
chr1	81524115	HG3_Ill_GATKHCSBGrefine_358	T	TAGATTTTGTGATACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_MetaSV_157:HG4_PB_SVrefine2Falcon1Dovetail_390:HG2_PB_PB10Xdip_2705:HG2_PB_HySA_1147:HG3_PB_HySA_880:HG2_PB_pbsv_614:HG4_PB_pbsv_623:HG2_PB_HySA_1146:HG3_PB_pbsv_623:HG2_PB_HySA_1145:HG2_PB_assemblyticsfalcon_863:HG2_PB_SVrefine2Falcon1plusDovetail_424:HG4_Ill_MetaSV_165:HG4_Ill_GATKHCSBGrefine_388:HG3_Ill_GATKHCSBGrefine_358:HG2_PB_SVrefine2PBcRplusDovetail_416:HG2_PB_SVrefine2PB10Xhap12_517;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_157:HG4_Ill_MetaSV_165:HG4_Ill_GATKHCSBGrefine_388:HG3_Ill_GATKHCSBGrefine_358:HG2_PB_SVrefine2PBcRplusDovetail_416:HG2_PB_SVrefine2PB10Xhap12_517;NumExactMatchSVs=6;ClusterMaxShiftDist=0.176282;ClusterMaxSizeDiff=0.176282;ClusterMaxEditDist=0.231511;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=2726;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=1:81524116-81524136;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:./.:3:9:0:10:1/1:0:7:0:8:1/1:0:17:1/1:2:69:.:.:.
chr1	81660352	HG4_Ill_SVrefine2DISCOVARDovetail_422	TACCA	AAAGAAAAACAGGATATCGGCATAGCCTCAAAATGTCTACCTTCAAATATTTATTAATTATTACAAGATATTTGATACTCCTTCCTCCAGGAGGGGGGAGCTTGCTTCCTCATTCCTTGAGTATGTACTGAATTTAGTGACTTGCTTCCAAAGATTAGCAAATGGAAAGGGAAAAATCGTGGAGATTTTTTAATAATTTAAAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_615:HG4_PB_SVrefine2PBcRDovetail_356:HG4_Ill_SVrefine2DISCOVARDovetail_422:HG2_10X_SVrefine210Xhap12_476:HG4_Ill_MetaSV_167:HG3_Ill_MetaSV_139:HG2_Ill_MetaSV_158;NumClusterSVs=7;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_476:HG4_Ill_SVrefine2DISCOVARDovetail_422:HG4_PB_SVrefine2PBcRDovetail_356;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0390244;ClusterMaxSizeDiff=0.0292683;ClusterMaxEditDist=0.16545;PBcalls=2;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=199;DistBack=-5;DistForward=-3;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:81660357-81660351;PctSeqSimilarity=0.9975;PctSizeSimilarity=0.9851;PctRecOverlap=0.9901;SizeDiff=-3;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=99;MatchId=200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:53:0|1:23:4:4:36:0|1:26:0:0:37:0/1:23:21:./.:.:.:.:.:.
chr1	82312041	HG2_Ill_GATKHCSBGrefine_348	T	TAAGAGTTTTTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGTTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_141:HG2_PB_assemblyticsfalcon_869:HG2_PB_pbsv_617:HG3_PB_assemblyticsfalcon_822:HG2_PB_HySA_1154:HG3_PB_HySA_883:HG4_PB_SVrefine2Falcon1Dovetail_392:HG3_Ill_GATKHCSBGrefine_360:HG2_Ill_MetaSV_160:HG2_Ill_GATKHCSBGrefine_348:HG2_PB_SVrefine2PBcRplusDovetail_420:HG2_PB_SVrefine2Falcon1plusDovetail_426:HG2_Ill_breakscan11_3003:HG3_PB_pbsv_627;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_348:HG2_Ill_MetaSV_160:HG3_Ill_GATKHCSBGrefine_360;NumExactMatchSVs=3;ClusterMaxShiftDist=0.132308;ClusterMaxSizeDiff=0.132308;ClusterMaxEditDist=0.236686;PBcalls=9;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=324;DistBack=4022;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:82312042-82312054;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:35:./.:12:13:6:22:0|1:24:0:0:13:0/1:24:10:0/1:7:37:.:.:.
chr1	83022782	HG3_Ill_SVrefine2DISCOVARDovetail_448	C	CTACTCCGTGCAGATGACAATGAGACCTTAGGGGACAGTGAAGTCTCCCACATGAGGGAAGAAGCCTGAATTCCTAAATCACCATGTGATGAAGAGACACCAGATATCCAGAAATCTGCAGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_483:HG2_PB_pbsv_620:HG2_PB_HySA_1163:HG3_PB_HySA_888:HG3_PB_pbsv_631:HG3_Ill_SVrefine2DISCOVARDovetail_448:HG2_PB_SVrefine2PBcRplusDovetail_424:HG2_Ill_SVrefine2DISCOVARplusDovetail_478;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_483:HG3_Ill_SVrefine2DISCOVARDovetail_448:HG2_Ill_SVrefine2DISCOVARplusDovetail_478;NumExactMatchSVs=3;ClusterMaxShiftDist=0.203252;ClusterMaxSizeDiff=0.195122;ClusterMaxEditDist=0.282443;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=121;DistBack=59166;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=114;REFWIDENED=1:83022783-83022896;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=204.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:0|1:28:1:2:27:./.:4:0:4:15:0/1:21:14:./.:.:.:.:.:.
chr1	84226446	HG2_Ill_Krunchall_710	A	ATCAGAGTGTGTGACATCACACTCTGATGTCAGAGTGTGTGACATCACACTCTGATGTCAGAGTGTGTGACATCACACTCTGATGTCAGAGTGTGTGACATCACACTCTGATG	20	PASS	ClusterIDs=HG2_Ill_Krunchall_710:HG3_PB_pbsv_640:HG2_PB_HySA_1178:HG2_PB_pbsv_627:HG3_Ill_Spiral_566:HG3_Ill_Krunchall_726:HG2_PB_SVrefine2Falcon1plusDovetail_433;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_Krunchall_710:HG3_Ill_Spiral_566:HG3_Ill_Krunchall_726:HG2_PB_SVrefine2Falcon1plusDovetail_433;NumExactMatchSVs=4;ClusterMaxShiftDist=0.103448;ClusterMaxSizeDiff=0.103448;ClusterMaxEditDist=0.176471;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=112;DistBack=24602;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=44;REFWIDENED=1:84226447-84226490;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:0|1:42:2:0:33:1|0:0:15:32:0:0/1:19:11:./.:.:.:.:.:.
chr1	84886830	HG2_Ill_250bpfermikitraw_729	G	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_729:HG2_PB_PB10Xdip_2773;NumClusterSVs=2;ExactMatchIDs=HG2_Ill_250bpfermikitraw_729;NumExactMatchSVs=1;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.105263;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:84886829-84886832;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:51:1/1:5:24:2:20:./.:3:5:3:8:0/1:4:34:./.:.:.:.:.:.
chr1	84913263	HG2_10X_SVrefine210Xhap12_491	G	GGAAAAACATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCCGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAGAAAGAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_1186:HG3_PB_pbsv_643:HG4_PB_pbsv_639:HG2_PB_pbsv_631:HG2_PB_PB10Xdip_2774:HG3_PB_SVrefine2Falcon1Dovetail_388:HG2_Ill_breakscan11_3005:HG4_PB_SVrefine2Falcon1Dovetail_395:HG3_Ill_MetaSV_148:HG2_10X_SVrefine210Xhap12_491:HG2_PB_SVrefine2PBcRplusDovetail_430:HG2_PB_SVrefine2PB10Xhap12_529:HG2_Ill_GATKHCSBGrefine_361:HG4_Ill_GATKHCSBGrefine_408:HG2_Ill_MetaSV_166:HG2_PB_SVrefine2Falcon1plusDovetail_435;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_491:HG3_Ill_MetaSV_148;NumExactMatchSVs=2;ClusterMaxShiftDist=0.077037;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.166667;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=328;DistBack=26365;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=1:84913264-84913274;PctSeqSimilarity=0.9836;PctSizeSimilarity=0.9676;PctRecOverlap=0.9705;SizeDiff=-11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:16:0:10:1/1:0:7:0:10:1/1:0:18:1/1:2:49:.:.:.
chr1	85222423	HG2_PB_SVrefine2PB10Xhap12_530	G	GGGGTGAGGGGGGGTGAGAGAGAGGGTGAGAGGGGGTGAGGGGGGTGGGGGGTGAGGGGGGGTTAGGGGGGTGGGGGGTGAGGGGGGTGAGGGGGTGGGGGGTGAGGGGGATGGGGGGTGAGGGGGGTGGGGGGTGAGGGGGGTGGGGGGTGACGGGGGATGAGAAGGGGGAGGGTGAGGGGGGATGGGGTGGGGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_530:HG3_PB_SVrefine2PBcRDovetail_370:HG4_PB_SVrefine2PBcRDovetail_367:HG2_PB_SVrefine2Falcon1plusDovetail_436:HG2_PB_pbsv_632:HG2_PB_PB10Xdip_2775:HG3_PB_SVrefine2Falcon1Dovetail_389:HG2_PB_HySA_1187:HG2_PB_SVrefine2PBcRplusDovetail_431:HG4_PB_pbsv_640;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_530:HG2_PB_SVrefine2PBcRplusDovetail_431;NumExactMatchSVs=2;ClusterMaxShiftDist=0.137405;ClusterMaxSizeDiff=0.137405;ClusterMaxEditDist=0.287154;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=197;DistBack=13696;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=44;REFWIDENED=1:85222424-85222467;PctSeqSimilarity=0.9733;PctSizeSimilarity=0.9801;PctRecOverlap=0.7761;SizeDiff=-4;StartDistance=-43;EndDistance=-43;GTMatch=1;TruScore=90;MatchId=208.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:22:0:30:./.:0:0:0:2:./.:0:1:./.:.:.:.:.:.
chr1	88860717	HG2_Ill_250bpfermikitraw_747	T	TAGGGGAAAAAAACATATTTATAAATGGAAAAAGAAATAGTTTATAATTAAGCAGAACTGAATGTTCTGACAGACAATATGCAAGGAATAAACATG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3006:HG3_PB_assemblyticsfalcon_867:HG2_PB_assemblyticsfalcon_917:HG2_PB_assemblyticsPBcR_902:HG4_PB_assemblyticsfalcon_857:HG2_PB_pbsv_643:HG4_PB_pbsv_655:HG4_PB_SVrefine2PBcRDovetail_372:HG4_Ill_svaba_700:HG4_Ill_manta_144:HG4_Ill_SVrefine2DISCOVARDovetail_450:HG4_Ill_Krunchall_776:HG4_Ill_GATKHC_904:HG4_Ill_GATKHCSBGrefine_415:HG4_Ill_Cortex_120:HG4_Ill_250bpfermikitraw_731:HG4_Ill_150bpfermikitraw_699:HG3_PB_SVrefine2PBcRDovetail_378:HG3_Ill_svaba_729:HG3_Ill_manta_118:HG3_Ill_Spiral_588:HG3_Ill_Krunchall_768:HG3_Ill_GATKHC_952:HG3_Ill_GATKHCSBGrefine_376:HG3_Ill_Cortex_130:HG3_Ill_250bpfermikitraw_728:HG3_Ill_150bpfermikitraw_687:HG2_PB_SVrefine2PBcRplusDovetail_441:HG2_PB_SVrefine2PB10Xhap12_539:HG2_Ill_svaba_701:HG2_Ill_manta_150:HG2_Ill_SpiralSDKrefine_530:HG2_Ill_SVrefine2DISCOVARplusDovetail_496:HG2_Ill_Krunchall_747:HG2_Ill_GATKHCSBGrefine_366:HG2_Ill_Cortex_232:HG2_Ill_250bpfermikitraw_747:HG2_Ill_150bpfermikitraw_676:HG2_10X_SVrefine210Xhap12_504:HG4_PB_SVrefine2Falcon1Dovetail_406:HG3_PB_pbsv_658:HG2_PB_PB10Xdip_2796:HG2_PB_PB10Xdip_2795;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_504:HG2_Ill_150bpfermikitraw_676:HG2_Ill_250bpfermikitraw_747:HG2_Ill_Cortex_232:HG2_Ill_GATKHCSBGrefine_366:HG2_Ill_Krunchall_747:HG2_Ill_SVrefine2DISCOVARplusDovetail_496:HG2_Ill_SpiralSDKrefine_530:HG2_Ill_manta_150:HG2_Ill_svaba_701:HG2_PB_SVrefine2PB10Xhap12_539:HG2_PB_SVrefine2PBcRplusDovetail_441:HG3_Ill_150bpfermikitraw_687:HG3_Ill_250bpfermikitraw_728:HG3_Ill_Cortex_130:HG3_Ill_GATKHCSBGrefine_376:HG3_Ill_GATKHC_952:HG3_Ill_Krunchall_768:HG3_Ill_Spiral_588:HG3_Ill_manta_118:HG3_Ill_svaba_729:HG3_PB_SVrefine2PBcRDovetail_378:HG4_Ill_150bpfermikitraw_699:HG4_Ill_250bpfermikitraw_731:HG4_Ill_Cortex_120:HG4_Ill_GATKHCSBGrefine_415:HG4_Ill_GATKHC_904:HG4_Ill_Krunchall_776:HG4_Ill_SVrefine2DISCOVARDovetail_450:HG4_Ill_manta_144:HG4_Ill_svaba_700:HG4_PB_SVrefine2PBcRDovetail_372;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0618557;ClusterMaxSizeDiff=0.0618557;ClusterMaxEditDist=0.120603;PBcalls=14;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=95;DistBack=80616;DistForward=21007;DistMin=21007;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:88860718-88860718;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:26:0:29:1/1:1:30:0:36:1/1:0:56:./.:.:.:.:.:.
chr1	88923362	HG2_Ill_GATKHCSBGrefine_367	C	CCACACAGTACACACACTATGCACTACCACACGCCACACTCACACACACCACACACCCATACACACTCTACACACCACACCCCCAAAAACACCACACACCACACACACCATGCACACACCATGCACACACACCACACAGGCACCACACATACCACACGCCCCATGCACACACCACACACCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_379:HG3_PB_pbsv_659:HG2_PB_PB10Xdip_2798:HG2_PB_assemblyticsfalcon_919:HG2_PB_PB10Xdip_2797:HG2_PB_HySA_1211:HG3_Ill_MetaSV_152:HG3_Ill_GATKHCSBGrefine_377:HG3_Ill_250bpfermikitraw_731:HG3_Ill_150bpfermikitraw_690:HG4_Ill_MetaSV_180:HG4_Ill_GATKHCSBGrefine_416:HG2_Ill_manta_151:HG2_Ill_MetaSV_170:HG2_Ill_GATKHCSBGrefine_367:HG3_PB_HySA_927:HG2_Ill_breakscan11_3007:HG4_PB_HySA_907:HG4_PB_pbsv_656:HG4_PB_SVrefine2Falcon1Dovetail_407:HG4_PB_SVrefine2PBcRDovetail_373:HG4_Ill_SVrefine2DISCOVARDovetail_452:HG2_PB_SVrefine2PBcRplusDovetail_442:HG2_PB_SVrefine2PB10Xhap12_540:HG2_Ill_SVrefine2DISCOVARplusDovetail_497:HG2_PB_pbsv_644;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_367:HG2_Ill_MetaSV_170:HG2_Ill_manta_151:HG4_Ill_GATKHCSBGrefine_416:HG4_Ill_MetaSV_180;NumExactMatchSVs=5;ClusterMaxShiftDist=0.129032;ClusterMaxSizeDiff=0.129032;ClusterMaxEditDist=0.313187;PBcalls=14;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=180;DistBack=17;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=164;REFWIDENED=1:88923287-88923450;PctSeqSimilarity=0.9757;PctSizeSimilarity=0.9524;PctRecOverlap=0.9577;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:63:1/1:2:33:2:19:./.:24:498:20:299:1/1:0:8:./.:.:.:.:.:.
chr1	88972809	HG2_PB_SVrefine2Falcon1plusDovetail_446	T	TAAAAGTTTACTGACTTGGGTGCTCTCTTAATCCTCACAACCCAATAAGTGCAGCACTCTTTATGTCTCCATTTTAAATGAGGAATCTGAAGTTCAAAGAAGTTAAATAAACCTATAAGCGGTTCTCAGTTTACAATTAGCAGTGAACTAGATTGAGATTTAAACCAGATTAAAAATATTTCTAGGAGGCTGAGGCAGGAAAATCGCTTCAACCTGGGAGGCAGAGGTTGCAGTGAGAACCGAGATTGCACCACTGCACTCCACCCAGACAACAGAGCAAGACTCCGTCTCAAAAAATAAAATAAAATAAAAGGAAAAGAAAAAAGAAATTTCAGGCAGAGGAGGTCGCGGCGCCGGAGGCCCCAGAAGGGTCGAAGGCGCCGCGGGCTGGGGTCGGTGGCTTAGGGAGCCCGTCCGGCCATGGTGGCCGCGGCTGGTGGTTGGCGCGGCTGCGCTGCGGCCCGGGGCAGTGCGGAGCCAGGACAGTCGCGGCGCTGACGCCCGCGGGCCCCAGCTGCAGATATGAAGCGGAGCCGCTGCCGCGACCGACCGCAGCCGCCGCCGCCCGACCGCCGGGAGGATGGAGTTCAGCGGGCAGCGGAGCTGTCTCAGTCTTTGCCGCCGCGCCGGCGAGCGCCGCCCGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGCGGGGCCCGAGGGCAAGGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGGAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGAAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGTCAGTCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGTCGGCCCCCCGCCGGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTTAAAAAAAAAAAAAAAAAAAAGAATGGACTTTCCCAGGCCAGCTGTGGTGGCTCACGACTGTAATCCCGGCACTGTGGCAGGCCAAGGCGGGCAGATCACCTGAGATCAGGAGTTCAAGACCAGCCTGACCAACGCGGAGAAACCCGTCTCTACTAAAAATAAAAAAAATTAGCTGGGCGTGGTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGTTGTGAGCTGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAGAGGGAAACTCCATCAAAAAAAAAAAAAAAAAAAGGACTTTCTCAAAGAAAATGTATTTAAATGTCTGCACCAATAATTCCAGCATGTGTATGAATAAATATGATATGTCCTTTAAAAAAAAAAAAAAAAAAAAATATTTCTAATCCGTTCAAATGTGAGGAAGCAAGCCAAACCATTCCCAAGATATCCCATTCAGGAAAGAGACAGGAGGTCCTACAAAGAATGTTGGAGCAGAGACATGTATATTTAGGGAGTCACAGCATGGTTTGAGGTCATGGTCCTGGATTCAACAGAACAAACCAGGGACACCTCTTGTTCGTAATAGCTAAGGCTGTGGCTTGGAAAACAATCTGATGAGACTGATGATTAAAATGTAAAATGAGTCTATTTTTTGATCAGCAATCCTACTGATAGTAACCTACCCCACAAAAACAAAGCCTCAGTTTATAAGGGTAAAATAAATGTGGAGGCGTGGAGCAGGGGGAGTTGCAGCATTTTTGTATTAGCAAAAACTTGGAAACAATGTCAGTGTCTACCAATACAGGAATAGATGAATAGATTGTGGTGTCTCCAAACAATAAAATATGATGCAGCACTAAAAAGACAGTGTTACAGGTGCCAAAATATATCATAGCATATGCTTTAAATATGTGCAGCTTACTGTATCTCAGTTACACCTCGATAAAGCTGTTAAAAAAAGAGACCACATTATTTAGATCCATATGCAATTGGCCAAAAACATGCCCATGATATATGTCTTTGTGAATAAAAGCACGTTTCCGTGTAAAGTAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_408:HG2_PB_PB10Xdip_2799:HG2_PB_assemblyticsfalcon_920:HG3_PB_assemblyticsfalcon_870:HG4_PB_assemblyticsfalcon_860:HG2_Ill_breakscan11_3008:HG2_PB_SVrefine2Falcon1plusDovetail_446:HG4_PB_SVrefine2PBcRDovetail_374:HG2_PB_SVrefine2PBcRplusDovetail_443:HG2_PB_SVrefine2PB10Xhap12_541;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_446;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0174511;ClusterMaxSizeDiff=0.0174511;ClusterMaxEditDist=0.0498667;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=3793;DistBack=35203;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=1:88972810-88972825;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9929;PctRecOverlap=0.9927;SizeDiff=-27;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=213.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:0|1:42:0:0:26:0|1:28:0:0:12:0/1:24:8:0/1:155:287:.:3810:.
chr1	90370560	HG3_PB_SVrefine2PBcRDovetail_382	T	TGGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGCGCCCGCCACTACGCCCGGCTATTTTTGTAGTTTTAGTAGAGACGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCGCCTC	20	PASS	ClusterIDs=HG2_PB_HySA_1224:HG3_PB_pbsv_662:HG4_PB_assemblyticsfalcon_870:HG3_PB_assemblyticsfalcon_879:HG2_PB_assemblyticsfalcon_929:HG2_PB_pbsv_647:HG2_Ill_breakscan11_3009:HG3_PB_SVrefine2PBcRDovetail_382:HG4_PB_HySA_913:HG4_PB_SVrefine2Falcon1Dovetail_410:HG2_PB_SVrefine2Falcon1plusDovetail_448:HG3_PB_HySA_937;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_382;NumExactMatchSVs=1;ClusterMaxShiftDist=0.113971;ClusterMaxSizeDiff=0.113971;ClusterMaxEditDist=0.203704;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=268;DistBack=75535;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=1:90370561-90370569;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.9889;PctRecOverlap=0.9926;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:26:0|1:24:1:3:29:0|1:33:0:0:5:0/1:38:10:./.:.:.:.:.:.
chr1	90776588	HG2_Ill_GATKHC_928	T	TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCATCC	20	PASS	ClusterIDs=HG3_PB_HySA_940:HG3_PB_pbsv_666:HG4_PB_HySA_916:HG2_PB_assemblyticsfalcon_933:HG2_PB_pbsv_651:HG4_Ill_GATKHC_920:HG3_Ill_GATKHC_967:HG4_PB_assemblyticsfalcon_875:HG3_PB_assemblyticsfalcon_883:HG3_Ill_GATKHC_966:HG3_Ill_GATKHCSBGrefine_382:HG2_Ill_GATKHC_928:HG2_Ill_GATKHCSBGrefine_373;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_373:HG2_Ill_GATKHC_928:HG3_Ill_GATKHCSBGrefine_382:HG3_Ill_GATKHC_966;NumExactMatchSVs=4;ClusterMaxShiftDist=0.254545;ClusterMaxSizeDiff=0.254545;ClusterMaxEditDist=0.27027;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=13;DistForward=23663;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=74;REFWIDENED=1:90776577-90776650;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=215.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:19:0|1:36:1:5:20:./.:2:7:15:0:0/1:18:4:./.:.:.:.:.:.
chr1	91415849	HG2_PB_PB10Xdip_2837	A	AAGGGGAGGGGAGGGAGGGCAGGGCAGGGGAGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGG	10	PASS	ClusterIDs=HG4_PB_pbsv_666:HG2_PB_PB10Xdip_2837:HG3_PB_HySA_950:HG2_PB_HySA_1240:HG2_PB_PB10Xdip_2836:HG2_PB_pbsv_654:HG2_PB_assemblyticsPBcR_927:HG3_PB_pbsv_670;NumClusterSVs=8;ExactMatchIDs=HG2_PB_PB10Xdip_2837;NumExactMatchSVs=1;ClusterMaxShiftDist=0.340741;ClusterMaxSizeDiff=0.340741;ClusterMaxEditDist=0.340741;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=63;DistBack=4;DistForward=16;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=1:91415835-91415863;PctSeqSimilarity=0.9516;PctSizeSimilarity=0.9365;PctRecOverlap=0.9365;SizeDiff=4;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=94;MatchId=216.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:6:29:0:7:./.:0:1:0:6:./.:3:2:./.:.:.:.:.:.
chr1	91924888	HG2_Ill_scalpel_570	A	AATATTATATATCATATATAATATTATATAATATTATATATGATATATAATATATAATATTATATATGATATATATTATATATATTATATATGATATATATTATAT	20	PASS	ClusterIDs=HG4_PB_HySA_933:HG4_Ill_scalpel_534:HG2_Ill_scalpel_570;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_scalpel_570:HG4_Ill_scalpel_534;NumExactMatchSVs=2;ClusterMaxShiftDist=0.027907;ClusterMaxSizeDiff=0.027907;ClusterMaxEditDist=0.027907;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=105;DistBack=7;DistForward=370;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=382;REFWIDENED=1:91924773-91925154;PctSeqSimilarity=0.9259;PctSizeSimilarity=0.8468;PctRecOverlap=0.656;SizeDiff=-19;StartDistance=33;EndDistance=33;GTMatch=0;TruScore=80;MatchId=217.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:16:46:./.:14:37:6:3:./.:0:0:0:0:0/1:6:22:./.:.:.:.:.:.
chr1	92280857	HG2_Ill_150bpfermikitraw_707	T	TTAAACTAAACTAAACTAAACTAAACTAAACTAAACTTAAAATAAAATAAAA	20	PASS	ClusterIDs=HG3_Ill_svaba_758:HG3_Ill_manta_121:HG3_Ill_Spiral_616:HG2_Ill_manta_156:HG2_Ill_FB_545:HG3_Ill_GATKHC_987:HG3_Ill_GATKHCSBGrefine_390:HG4_PB_HySA_939:HG3_Ill_svaba_759:HG2_PB_HySA_1250:HG3_Ill_Krunchall_799:HG3_Ill_250bpfermikitraw_759:HG3_Ill_150bpfermikitraw_717:HG2_Ill_svaba_732:HG2_Ill_Krunchall_776:HG2_Ill_250bpfermikitraw_781:HG2_Ill_150bpfermikitraw_707:HG3_PB_assemblyticsfalcon_899:HG4_Ill_svaba_736:HG4_PB_pbsv_674:HG4_Ill_Krunchall_810:HG4_Ill_250bpfermikitraw_773:HG4_Ill_150bpfermikitraw_738;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_707:HG2_Ill_250bpfermikitraw_781:HG2_Ill_Krunchall_776:HG2_Ill_svaba_732:HG3_Ill_150bpfermikitraw_717:HG3_Ill_250bpfermikitraw_759:HG3_Ill_Krunchall_799:HG3_Ill_svaba_759;NumExactMatchSVs=8;ClusterMaxShiftDist=0.27451;ClusterMaxSizeDiff=0.27451;ClusterMaxEditDist=0.330097;PBcalls=4;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=10;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=0;DistForward=26;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=1:92280856-92280858;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9804;PctRecOverlap=0.9804;SizeDiff=1;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:18:./.:9:15:15:1:./.:0:17:11:4:0/1:20:45:./.:.:.:.:.:.
chr1	92305952	HG4_PB_pbsv_675	A	AAAATATCATGCATGAATTTTTGTATATCATGCAAATGATTTTGTAAATATCATGCCATGATTTTGGTAATATCATGCATGATTTTTTGTAATATCAATGCATGATTTTGTAATATCATGCATGATTTTGTAATATCATGCAATGATTTTGTAATATCATGCATGATTTTGTATATCAATGCATGATTTTGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_417:HG2_PB_pbsv_660:HG3_PB_pbsv_678:HG4_PB_pbsv_675:HG2_PB_HySA_1252:HG2_Ill_SVrefine2DISCOVARplusDovetail_512:HG2_PB_SVrefine2PBcRplusDovetail_451;NumClusterSVs=7;ExactMatchIDs=HG4_PB_pbsv_675;NumExactMatchSVs=1;ClusterMaxShiftDist=0.369973;ClusterMaxSizeDiff=0.369973;ClusterMaxEditDist=0.369973;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=191;DistBack=14;DistForward=71;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=187;REFWIDENED=1:92305936-92306122;PctSeqSimilarity=0.9578;PctSizeSimilarity=0.9424;PctRecOverlap=0.8953;SizeDiff=11;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=93;MatchId=219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:31:0|1:19:1:3:31:0/0:10:0:17:0:0/1:44:11:./.:.:.:.:.:.
chr1	92392903	HG3_Ill_250bpfermikitraw_761	T	TATACACATACATATATGTGTGTATATATATACACATACATATATGTGTGTATATATATACACATACATATATGTGTGTATATATAC	20	PASS	ClusterIDs=HG2_PB_pbsv_662:HG2_PB_assemblyticsfalcon_951:HG2_PB_assemblyticsPBcR_937:HG3_Ill_Krunchall_802:HG3_Ill_250bpfermikitraw_761:HG2_Ill_Krunchall_779:HG2_PB_HySA_1254:HG3_PB_pbsv_680;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_Krunchall_779:HG3_Ill_250bpfermikitraw_761:HG3_Ill_Krunchall_802;NumExactMatchSVs=3;ClusterMaxShiftDist=0.079096;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.180791;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=16;DistForward=848;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:92392902-92392905;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=220.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:28:0|1:13:2:1:30:1|0:0:24:14:0:0/1:27:15:./.:.:.:.:.:.
chr1	92679004	HG2_Ill_SVrefine2DISCOVARplusDovetail_515	T	TAATAGGTACTAGACACCATTCTGTAATAGGTGCTAAAGATTCATCAGCAAACCAAACAGACA	20	PASS	ClusterIDs=HG2_PB_HySA_1258:HG3_PB_HySA_963:HG2_PB_pbsv_664:HG4_PB_SVrefine2Falcon1Dovetail_419:HG3_PB_SVrefine2PBcRDovetail_390:HG3_Ill_svaba_763:HG3_Ill_manta_122:HG3_Ill_Krunchall_805:HG3_Ill_GATKHC_994:HG3_Ill_GATKHCSBGrefine_391:HG3_Ill_250bpfermikitraw_764:HG3_Ill_150bpfermikitraw_723:HG2_Ill_svaba_736:HG2_Ill_SVrefine2DISCOVARplusDovetail_515:HG2_Ill_Krunchall_781:HG2_Ill_GATKHC_955:HG2_Ill_GATKHCSBGrefine_384:HG2_Ill_250bpfermikitraw_786:HG2_10X_SVrefine210Xhap12_521;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_521:HG2_Ill_250bpfermikitraw_786:HG2_Ill_GATKHCSBGrefine_384:HG2_Ill_GATKHC_955:HG2_Ill_Krunchall_781:HG2_Ill_SVrefine2DISCOVARplusDovetail_515:HG2_Ill_svaba_736:HG3_Ill_150bpfermikitraw_723:HG3_Ill_250bpfermikitraw_764:HG3_Ill_GATKHCSBGrefine_391:HG3_Ill_GATKHC_994:HG3_Ill_Krunchall_805:HG3_Ill_manta_122:HG3_Ill_svaba_763:HG3_PB_SVrefine2PBcRDovetail_390:HG4_PB_SVrefine2Falcon1Dovetail_419;NumExactMatchSVs=16;ClusterMaxShiftDist=0.046875;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.186047;PBcalls=5;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=62;DistBack=-62;DistForward=64;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=64;REFWIDENED=1:92679005-92679068;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:27:0|1:21:3:1:22:./.:3:38:14:0:0/1:21:27:./.:.:.:.:.:.
chr1	93167519	HG2_PB_SVrefine2PBcRplusDovetail_453	C	GTATGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTACTG	10	PASS	ClusterIDs=HG2_PB_HySA_1263:HG3_PB_pbsv_682:HG2_PB_pbsv_666:HG4_PB_pbsv_678:HG2_PB_assemblyticsPBcR_943:HG3_PB_assemblyticsfalcon_907:HG2_PB_PB10Xdip_2857:HG2_PB_PB10Xdip_2858:HG3_PB_SVrefine2PBcRDovetail_391:HG2_PB_SVrefine2PB10Xhap12_558:HG2_PB_SVrefine2Falcon1plusDovetail_450:HG4_PB_SVrefine2PBcRDovetail_385:HG2_PB_SVrefine2PBcRplusDovetail_453:HG4_PB_SVrefine2Falcon1Dovetail_420:HG3_PB_HySA_965:HG4_PB_HySA_953;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_453;NumExactMatchSVs=1;ClusterMaxShiftDist=0.130106;ClusterMaxSizeDiff=0.130106;ClusterMaxEditDist=0.199693;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=323;DistBack=32414;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:93167520-93167518;PctSeqSimilarity=0.9923;PctSizeSimilarity=0.9848;PctRecOverlap=0.9818;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:2:37:0:14:./.:1:10:0:5:1/1:0:14:1/1:4:62:.:.:.
chr1	93414200	HG3_Ill_GATKHCSBGrefine_393	A	ATATATATACGTATATATACATATGTGTATATATACGTATATATACATATGTGTATATATACGTATATATACATATGTGTATATATACGTATATATACATATGTG	20	PASS	ClusterIDs=HG3_PB_pbsv_685:HG3_PB_SVrefine2PBcRDovetail_393:HG2_PB_pbsv_669:HG3_Ill_GATKHCSBGrefine_393:HG3_Ill_250bpfermikitraw_771:HG2_Ill_SVrefine2DISCOVARplusDovetail_520:HG2_Ill_GATKHCSBGrefine_388:HG2_PB_HySA_1268:HG2_Ill_breakscan11_3011;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_388:HG2_Ill_SVrefine2DISCOVARplusDovetail_520:HG3_Ill_250bpfermikitraw_771:HG3_Ill_GATKHCSBGrefine_393:HG3_PB_SVrefine2PBcRDovetail_393;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0747664;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.243243;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=104;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=162;REFWIDENED=1:93414201-93414362;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:25:8:3:26:1|0:0:7:18:0:0/1:19:17:./.:.:.:.:.:.
chr1	93498212	HG2_10X_SVrefine210Xhap12_522	T	TAGATTCCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_670:HG4_PB_pbsv_681:HG2_PB_HySA_1269:HG3_PB_pbsv_686:HG3_PB_SVrefine2PBcRDovetail_394:HG2_PB_assemblyticsPBcR_948:HG3_PB_assemblyticsfalcon_911:HG2_PB_SVrefine2PB10Xhap12_560:HG2_10X_SVrefine210Xhap12_522:HG4_PB_SVrefine2PBcRDovetail_387:HG2_PB_SVrefine2PBcRplusDovetail_455:HG4_PB_SVrefine2Falcon1Dovetail_422:HG2_PB_SVrefine2Falcon1plusDovetail_451:HG4_PB_HySA_956:HG3_PB_HySA_968:HG2_PB_PB10Xdip_2863:HG2_PB_PB10Xdip_2864:HG2_Ill_breakscan11_3012;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_522:HG2_PB_SVrefine2PB10Xhap12_560;NumExactMatchSVs=2;ClusterMaxShiftDist=0.124629;ClusterMaxSizeDiff=0.124629;ClusterMaxEditDist=0.270504;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=340;DistBack=72752;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=1:93498213-93498226;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9971;PctRecOverlap=0.9941;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=224.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:./.:0:0:0:0:./.:0:2:0:0:1/1:0:24:./.:4:54:.:.:.
chr1	93810434	HG2_Ill_GATKHCSBGrefine_389	A	ATATAATATATATTATATATATATAAATATATATTAATATATATAAATATATATTATATATATATAATATATATAAATATATATTATATATATATAATATATATATATATATATT	20	PASS	ClusterIDs=HG2_PB_pbsv_672:HG4_PB_HySA_958:HG2_PB_assemblyticsPBcR_950:HG2_PB_HySA_1271:HG2_PB_SVrefine2PBcRplusDovetail_456:HG2_PB_SVrefine2PB10Xhap12_561:HG3_Ill_MetaSV_159:HG2_Ill_SVrefine2DISCOVARplusDovetail_522:HG4_PB_SVrefine2PBcRDovetail_388:HG4_Ill_GATKHCSBGrefine_435:HG2_Ill_GATKHC_965:HG2_Ill_GATKHCSBGrefine_389:HG3_Ill_GATKHC_1001:HG3_Ill_GATKHCSBGrefine_394:HG3_PB_pbsv_687:HG4_Ill_MetaSV_188:HG2_PB_PB10Xdip_2866:HG2_PB_PB10Xdip_2865:HG3_Ill_Spiral_626:HG2_Ill_manta_162:HG4_Ill_GATKHCSBGrefine_434:HG4_Ill_250bpfermikitraw_787:HG2_Ill_MetaSV_177:HG4_PB_pbsv_682:HG4_Ill_SVrefine2DISCOVARDovetail_470:HG4_PB_SVrefine2Falcon1Dovetail_423:HG2_PB_SVrefine2Falcon1plusDovetail_452;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_389:HG2_Ill_GATKHC_965:HG4_Ill_GATKHCSBGrefine_435;NumExactMatchSVs=3;ClusterMaxShiftDist=0.229787;ClusterMaxSizeDiff=0.229787;ClusterMaxEditDist=0.277056;PBcalls=13;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=114;DistBack=18;DistForward=17941;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=50;REFWIDENED=1:93810386-93810435;PctSeqSimilarity=0.9504;PctSizeSimilarity=0.9048;PctRecOverlap=0.9055;SizeDiff=-12;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:./.:9:9:0:23:./.:1:6:0:1:0/1:3:16:./.:.:.:.:.:.
chr1	94341678	HG2_Ill_SVrefine2DISCOVARplusDovetail_525	CATAATGTCAAATGAAT	ATTTTTTCTTTTCTTTTTTTTTGTAGAGACAGAGTCTCAATATGTTGCCCAAACTGGTCTTAAACTCCTGTAAATATTTTCAATCTAGTAAAGTCATTTAGAAGAAACTCTGGATGAACAATGAATTAAACAAAAAAGGTTTTGGGGGAACACATCCAAATTTATTCTCCAGATTTTCTTTCTTTTTTTTTTTTTTCTTTTTGAGACAGAGTCTGGTTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTTCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGTGCCCGCCACCACACCTGGCTAATTTTTTTTGTATTTTTAATAGAGACGGGGTTTCAACGTGTTAGCCACGGTGGATATTCTCCAGATTTTCTTAGAGAAGATTAAGGCACCGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGCCAAGGCGGGCGGATCACTTGAGGTCAAGAGTTCAAGACCAGCCTGGCCAAAATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCAGGTGTGGTGGTGCACGCCTGCAATCCCAGCTACTAGGGAGGCTGAGGTAGGAGAATCTCTTGAACCCAGGCGACTGAGGTTGCAGTAAGCTGAGATCGCATCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAACAACAAAAAAAGAAGATTAAGGCCATATAAAATACCAATAGATTTCATAAAGAGATTTTATAAATTACAGAAAAGGAGAGAAGAGAATATACCTGACAATTCAACTTCATATATAAGTACTGAGTTAATAAATGTACACATCTCCATTTCTAAAACTAATGAGAAAGGCAGGTTCTTGAACTTCCAAGTTATCAAAACTTAAATGTTTTTTTCCTGGGTGACGAAGGGCATTTGCTAGTATCTCTAAAGTGAGTCTCGAACAGCAATGAGCATCCATCCCACAGGAGTGTTTTAAAAATACAAATATCATACCCCAGACCTACCAAATTGGGATCTTCTAGGGTTGACCCGGGCTCCTGCTATATTTATGTAATAATTTCTACTTTATATTATGGAAGGGTCCTTTTAAGAAGTACACTTGGACTTACAGTAACTTTCCTCCCTAATTATCCATATACACTGAGTAGTTGAAAGCATAATCAACCTCTACTGGAAAGTGAAATCATTCTAGTGCAGTGTCTTGGCAGTAATTCTCAACCCTGAATGTATATATGTAGTCCCCTGGCTGGAACTACTGGCACATGACACCATACCCAGCTTAGTGTGCACTAAATCTTTTTTTTTTGAGACCAAGTTTTGCTCTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGATAACAGGCGCCCGCCACCACACCCAGCAGCCAGGCTAGTCTCCAACTCCTGACCTCAGGTGATACACCCATCTTGGCCTCCCAAAGTAAGTTTGCACTCAATCTTAAATGATCATTTGACATTATGGAACTCTAAGTTCCCAAATACTCACAATATTGAAAAATGGATACAACCCAAATGTCTACCATTACTTGAATGAATGCATAAATTCATTGTTGTATAGTCATACAATGGAATACCACTCAGCAATAAAAAAGAATGAACTACTGGTATATACAGTAACATGGATGAATTACAGAAATAATATTCTGAGTGAAAGAATGCAAGCAGAAGAGAGTACTTTTTTTTTTTTTTTTTGAGACAGGGTCTCACTGTCACCCATGCTGGAGTGCTGTGGCGCGATCTCGGCTCACTGCAACCTCTGCCTCCTGAGCTCAAGTAAGTGATCCTCTCACCTCAGCCTCCCCAGTAGCTGGGACCACAGGTGCTTGCCACCATGCCCAGCTTTTTAAAAAAATTTTTTGTAGAGATGGGTTTTTCCCATGTTGCCCAAGCCAGTCTTGAACTCCAGGGCTCAAAATGCTGAAATTACAGGCACGAGTCACTTACTGCTCTTAACAATCACATACAAAAATCTTAACATATGATTTTTTTTTTTTTTTTTGAGACAACATCTCCCTCCATTGCCCAGGCTGGAGTGCAGCGGCACAATCATGGCTCACCGCAGCCTCAATGTCCAGGGCTCAAGCAATCCTCCCACCTCAGCTTCCCAAGTAGCTGGGACCACAGGCGCACAGGGCACGGCTAATTTAAAAAAAATTTTTTGTGTAGAGATAGGGTCTCCTTATATTGCCCAGGCTGATCTCAAACACCTACTTGGGCTCAAGTGATCCTCCTGCCTCAGCCTCACAAAGTGCTGGGATTACAGGCATGAGTCACTGCATCCAACAGATTGATTTCTAATATGTCACCAAAAGGAGCACCTTTAGCTATGATTGGTGGGAAAAATATGACTAAAATAGGTATCCAAAAAGACAAGGGAAATGCTGGATAGAA	20	PASS	ClusterIDs=HG2_Ill_Spiral_32:HG4_PB_pbsv_684:HG3_PB_pbsv_688:HG2_PB_pbsv_673:HG4_PB_HySA_959:HG4_PB_SVrefine2Falcon1Dovetail_425:HG4_PB_SVrefine2PBcRDovetail_391:HG4_Ill_SVrefine2DISCOVARDovetail_471:HG2_PB_SVrefine2PBcRplusDovetail_457:HG2_PB_SVrefine2PB10Xhap12_562:HG2_Ill_SVrefine2DISCOVARplusDovetail_525:HG2_10X_SVrefine210Xhap12_527:HG2_PB_SVrefine2Falcon1plusDovetail_453:HG3_PB_SVrefine2PBcRDovetail_395:HG4_Ill_Spiral_49:HG3_Ill_Spiral_628;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_527:HG2_Ill_SVrefine2DISCOVARplusDovetail_525:HG2_PB_SVrefine2PB10Xhap12_562:HG2_PB_SVrefine2PBcRplusDovetail_457;NumExactMatchSVs=4;ClusterMaxShiftDist=0.042328;ClusterMaxSizeDiff=0.0395846;ClusterMaxEditDist=0.172787;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=2504;DistBack=-10;DistForward=-11;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:94341695-94341677;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9996;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=-2;EndDistance=14;GTMatch=0;TruScore=99;MatchId=226.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:114:1/1:0:42:1:35:1/1:0:11:0:8:1/1:0:40:1/1:11:429:.:2453:.
chr1	96618650	HG2_Ill_GATKHCSBGrefine_396	G	GAAAATGCACCAATCAGCACTCTGTGTCTAGCTAAAGGTCTGTAAATGCACCAGTCAGCACTCTGTA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_533:HG4_PB_pbsv_688:HG2_PB_PB10Xdip_2876:HG2_PB_pbsv_679:HG2_PB_HySA_1286:HG4_Ill_GATKHC_976:HG4_Ill_GATKHCSBGrefine_442:HG4_Ill_250bpfermikitraw_802:HG2_Ill_Krunchall_809:HG2_Ill_GATKHC_988:HG2_Ill_GATKHCSBGrefine_396:HG2_Ill_250bpfermikitraw_813:HG4_Ill_SVrefine2DISCOVARDovetail_478:HG2_PB_SVrefine2PBcRplusDovetail_460:HG2_PB_SVrefine2PB10Xhap12_565;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_813:HG2_Ill_GATKHCSBGrefine_396:HG2_Ill_GATKHC_988:HG2_Ill_Krunchall_809:HG4_Ill_250bpfermikitraw_802:HG4_Ill_GATKHCSBGrefine_442:HG4_Ill_GATKHC_976;NumExactMatchSVs=7;ClusterMaxShiftDist=0.143885;ClusterMaxSizeDiff=0.129496;ClusterMaxEditDist=0.262069;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=-222;DistForward=112311;DistMin=-222;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=265;REFWIDENED=1:96618608-96618872;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:30:0|1:28:0:1:27:./.:6:5:7:0:0/1:17:15:./.:.:.:.:.:.
chr1	97717628	HG4_PB_SVrefine2Falcon1Dovetail_433	T	TTCCCAGACAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCCATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_433:HG3_PB_pbsv_697:HG2_PB_HySA_1291:HG2_PB_pbsv_683:HG3_PB_assemblyticsfalcon_931;NumClusterSVs=5;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_433;NumExactMatchSVs=1;ClusterMaxShiftDist=0.123648;ClusterMaxSizeDiff=0.123648;ClusterMaxEditDist=0.25966;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=328;DistBack=30;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=1:97717629-97717644;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9939;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:21:0|1:24:0:7:22:0|1:19:0:0:6:0/1:37:8:0/1:9:45:.:.:.
chr1	100994210	HG3_Ill_GATKHCSBGrefine_415	T	TAAAATTTCATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_2:HG3_PB_pbsv_707:HG3_PB_HySA_1020:HG2_PB_pbsv_691:HG2_PB_assemblyticsfalcon_1003:HG4_PB_pbsv_700:HG4_PB_HySA_1002:HG2_Ill_breakscan11_3014:HG2_PB_SVrefine2Falcon1plusDovetail_463:HG3_PB_SVrefine2PBcRDovetail_405:HG2_PB_SVrefine2PBcRplusDovetail_466:HG2_PB_SVrefine2PB10Xhap12_575:HG4_PB_SVrefine2Falcon1Dovetail_437:HG4_Ill_GATKHCSBGrefine_456:HG3_Ill_manta_130:HG3_Ill_GATKHCSBGrefine_415:HG2_Ill_GATKHCSBGrefine_407:HG2_PB_HySA_1315;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_407:HG3_Ill_GATKHCSBGrefine_415:HG3_Ill_manta_130:HG4_Ill_GATKHCSBGrefine_456:HG4_PB_SVrefine2Falcon1Dovetail_437;NumExactMatchSVs=5;ClusterMaxShiftDist=0.130699;ClusterMaxSizeDiff=0.130699;ClusterMaxEditDist=0.249275;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=322;DistBack=-12;DistForward=0;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=1:100994211-100994221;PctSeqSimilarity=0.9758;PctSizeSimilarity=0.9527;PctRecOverlap=0.9528;SizeDiff=-16;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:36:0:15:1/1:0:7:0:6:1/1:0:24:1/1:2:69:.:.:.
chr1	101770052	HG2_PB_SVrefine2Falcon1plusDovetail_468	T	TAAAAATTAATTTATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGAACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_440:HG2_PB_pbsv_701:HG2_PB_assemblyticsfalcon_1014:HG4_PB_pbsv_707:HG2_PB_PB10Xdip_14:HG4_Ill_GATKHCSBGrefine_463:HG2_Ill_GATKHCSBGrefine_417:HG2_PB_SVrefine2PB10Xhap12_583:HG3_Ill_MetaSV_168:HG3_Ill_GATKHCSBGrefine_422:HG2_PB_SVrefine2PBcRplusDovetail_470:HG2_PB_SVrefine2Falcon1plusDovetail_468:HG2_Ill_MetaSV_186:HG3_PB_SVrefine2Falcon1Dovetail_404:HG3_PB_pbsv_715:HG2_PB_HySA_1333:HG4_PB_HySA_1013;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_468:HG2_PB_SVrefine2PBcRplusDovetail_470:HG3_Ill_GATKHCSBGrefine_422:HG3_Ill_MetaSV_168;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0489297;ClusterMaxSizeDiff=0.0489297;ClusterMaxEditDist=0.222561;PBcalls=12;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=319;DistBack=14183;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:101770053-101770067;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:1:29:0:21:1/1:0:7:0:5:1/1:0:18:1/1:1:50:.:.:.
chr1	101978980	HG3_PB_SVrefine2Falcon1Dovetail_405	T	TTAGATTTTCTTTTTTTTTTTTTTTTTTTTTTTTCAAAAGACAATCTGCCTTTATTTCTCAAAATGACTTTGACCTCAAATTCTGAAACTGACAGGGTGACTTTGCTCAGTGAATAAATATGATACAGAACCTTTTAGAGGGAATCGAATATGCCGAATACCCAAGTGATCTCTCTGTCTCTCTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGAGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGTTGTTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAAGGAATCCTTTCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAA	10	PASS	ClusterIDs=HG2_PB_HySA_1335:HG4_PB_pbsv_708:HG2_PB_HySA_1336:HG2_PB_pbsv_702:HG2_PB_SVrefine2PB10Xhap12_584:HG2_PB_PB10Xdip_15:HG2_PB_assemblyticsPBcR_1006:HG2_PB_assemblyticsfalcon_1017:HG2_PB_SVrefine2PBcRplusDovetail_471:HG3_PB_SVrefine2Falcon1Dovetail_405:HG4_PB_SVrefine2Falcon1Dovetail_441:HG2_PB_SVrefine2Falcon1plusDovetail_469;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_405;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0684774;ClusterMaxSizeDiff=0.0674897;ClusterMaxEditDist=0.215633;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=2976;DistBack=8970;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=1:101978981-101978991;PctSeqSimilarity=0.998;PctSizeSimilarity=0.997;PctRecOverlap=0.9973;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:61:1|0:4:39:51:0:./.:1:7:28:1:0/1:29:14:0/1:106:315:.:2862:.
chr1	102494817	HG2_Ill_GATKHCSBGrefine_422	T	TGTATACATGTTAAATGTATACAGTATACATGTTAAATGTATACAGTATACATGTTAAATGTATACAGTATACATGTTAAATGTATACA	20	PASS	ClusterIDs=HG2_PB_HySA_1339:HG2_PB_pbsv_705:HG4_PB_pbsv_712:HG4_Ill_Krunchall_889:HG4_Ill_GATKHCSBGrefine_469:HG4_Ill_250bpfermikitraw_852:HG2_Ill_Krunchall_857:HG2_Ill_GATKHCSBGrefine_422:HG2_Ill_250bpfermikitraw_864:HG2_Ill_breakscan11_3016:HG4_PB_HySA_1028;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_864:HG2_Ill_GATKHCSBGrefine_422:HG2_Ill_Krunchall_857:HG4_Ill_250bpfermikitraw_852:HG4_Ill_GATKHCSBGrefine_469:HG4_Ill_Krunchall_889;NumExactMatchSVs=6;ClusterMaxShiftDist=0.108108;ClusterMaxSizeDiff=0.0972973;ClusterMaxEditDist=0.2;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=39618;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=1:102494818-102494849;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=235.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:40:./.:26:6:15:23:1|0:1:36:20:0:0/1:32:17:./.:.:.:.:.:.
chr1	102512641	HG3_Ill_svaba_823	T	TACCTTTGTCTTCCTTGGACGTGCCTGGGCACCACTTCTGCCAACCTGTGAAGCCATCCTGCCCTGAC	20	PASS	ClusterIDs=HG2_PB_pbsv_706:HG3_PB_HySA_1041:HG3_PB_pbsv_722:HG4_PB_pbsv_713:HG2_PB_HySA_1342:HG4_Ill_svaba_791:HG4_Ill_manta_162:HG4_Ill_Krunchall_892:HG4_Ill_GATKHC_1028:HG4_Ill_GATKHCSBGrefine_470:HG4_Ill_Cortex_131:HG4_Ill_250bpfermikitraw_854:HG4_Ill_150bpfermikitraw_812:HG3_Ill_svaba_823:HG3_Ill_manta_133:HG3_Ill_Spiral_675:HG3_Ill_Krunchall_879:HG3_Ill_GATKHC_1075:HG3_Ill_GATKHCSBGrefine_427:HG3_Ill_Cortex_143:HG3_Ill_250bpfermikitraw_844:HG3_Ill_150bpfermikitraw_800:HG2_PB_assemblyticsfalcon_1023:HG2_Ill_svaba_800:HG2_Ill_manta_174:HG2_Ill_SpiralSDKrefine_608:HG2_Ill_Krunchall_860:HG2_Ill_GATKHC_1043:HG2_Ill_GATKHCSBGrefine_423:HG2_Ill_Cortex_261:HG2_Ill_250bpfermikitraw_866:HG2_Ill_150bpfermikitraw_777:HG2_PB_PB10Xdip_25;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_777:HG2_Ill_250bpfermikitraw_866:HG2_Ill_Cortex_261:HG2_Ill_GATKHCSBGrefine_423:HG2_Ill_GATKHC_1043:HG2_Ill_Krunchall_860:HG2_Ill_SpiralSDKrefine_608:HG2_Ill_manta_174:HG2_Ill_svaba_800:HG2_PB_assemblyticsfalcon_1023:HG3_Ill_150bpfermikitraw_800:HG3_Ill_250bpfermikitraw_844:HG3_Ill_Cortex_143:HG3_Ill_GATKHCSBGrefine_427:HG3_Ill_GATKHC_1075:HG3_Ill_Krunchall_879:HG3_Ill_Spiral_675:HG3_Ill_manta_133:HG3_Ill_svaba_823:HG4_Ill_150bpfermikitraw_812:HG4_Ill_250bpfermikitraw_854:HG4_Ill_Cortex_131:HG4_Ill_GATKHCSBGrefine_470:HG4_Ill_GATKHC_1028:HG4_Ill_Krunchall_892:HG4_Ill_manta_162:HG4_Ill_svaba_791;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0583942;ClusterMaxSizeDiff=0.0437956;ClusterMaxEditDist=0.242857;PBcalls=7;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=67;DistBack=-1;DistForward=46267;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:102512640-102512643;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=236.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:0:24:1:21:1/1:0:34:1:28:1/1:0:46:./.:.:.:.:.:.
chr1	102568917	HG2_PB_HySA_1343	G	GAAAAGTGTGAGAGGAGGAGCCAAGATGGCTGAATAGGAAACAGACTCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATATTCTGCATTTCCATCTGAGGTAACGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGGGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACGTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCACCTCTGGGGGCAGGACACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAATGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACTGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAGCTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACAAAAGGCAAAGAAGTTGAAATCTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAGTGGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTATAAAGAAAAGAATTTTCAACCCAAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACAAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAAATGGTAAAGGGATCAATACAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACTTATTCCAAAATTGACCATATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCACTCAACTACATGGAAACTGAACAACCTGCTCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTCGAAAGGATCAACAAAATTGATGGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACTGATACCCACAGAAATACCAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAAAAAATCATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAACCGAATTCTACAGCAGAGGTACAAGGAGGAACTGGTACCATTCCTCCTGAAACAATATTCAAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTAATGAGGCCAGCATCATTCTGATACAAAGCCGGGCAGAGAACAACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACCAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTACTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACATGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAGACTATACTACAAGGCTACAGTAACCAAAAACAGCATGGTACTGGTACCAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGAAAACTGGCTAGCCATAATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAAGATTTAAACGTTAGACCTAAAACCATAAAAAACCCTAGAAGAAAACCTAGGCATTACCCATTCAGGACATAGGCGGGGCAAGGACACTTAGTCCAAAACACCAAAAGCAGAATTGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAAAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAAAAAATTTTCGCAACTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAACAAACAACACACCCCATCAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGCAGAAGAAATGCCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTAACCACACATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCTATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTCTATAAAAGACACATGCACACGTATGTTTATTGCGGCACTATCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGACATGGTATGAAATTGGAAAACCATCATTCTCAGTAAACTATCCAGAAAAAAAAAACCAAAGACCCGCATATTCTCACTCATAGGTGGGAATTGAAAACAATGAGAACCTTGGGACACAGGAAGGGAAATATCACACTCTGGGGACTGTGGTGGGGGTCGGGGGAGGGAGGAGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTATACCTGCACAATGTGCACATCATGTACCCTAAAACTTAGAGTATAATAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAGAAATTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_587:HG2_PB_HySA_1343:HG2_PB_PB10Xdip_26:HG2_PB_SVrefine2Falcon1plusDovetail_472:HG2_PB_SVrefine2PBcRplusDovetail_473;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_1343;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0105315;ClusterMaxSizeDiff=0.0105315;ClusterMaxEditDist=0.0225366;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6108;DistBack=9639;DistForward=32911;DistMin=9639;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:102568909-102568920;PctSeqSimilarity=0.9911;PctSizeSimilarity=0.9917;PctRecOverlap=0.9915;SizeDiff=51;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=99;MatchId=237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:39:0|1:27:3:1:34:./.:39:0:1:6:./.:39:4:0/1:233:500:.:6083:.
chr1	102920530	HG2_PB_SVrefine2PB10Xhap12_588	T	TGTAGTTAATATTTTATTTTATTTTATTTTATTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAAGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_1032:HG4_PB_pbsv_715:HG2_PB_pbsv_707:HG2_PB_PB10Xdip_27:HG2_PB_assemblyticsfalcon_1025:HG2_PB_HySA_1346:HG4_PB_SVrefine2Falcon1Dovetail_444:HG4_Ill_manta_163:HG4_Ill_MetaSV_197:HG4_Ill_GATKHCSBGrefine_471:HG2_PB_SVrefine2PB10Xhap12_588:HG2_Ill_MetaSV_188:HG2_Ill_GATKHCSBGrefine_424:HG2_PB_SVrefine2Falcon1plusDovetail_473:HG2_PB_SVrefine2PBcRplusDovetail_474;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_424:HG2_Ill_MetaSV_188:HG2_PB_SVrefine2PB10Xhap12_588:HG4_Ill_GATKHCSBGrefine_471:HG4_Ill_MetaSV_197:HG4_Ill_manta_163;NumExactMatchSVs=6;ClusterMaxShiftDist=0.11838;ClusterMaxSizeDiff=0.11838;ClusterMaxEditDist=0.239748;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=323;DistBack=-49679;DistForward=12;DistMin=-49679;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=1:102920531-102920544;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:35:1|0:0:23:25:1:1|0:0:9:18:0:0/1:31:14:0/1:7:34:.:.:.
chr1	104480853	HG4_Ill_SVrefine2DISCOVARDovetail_505	T	TTGTTTAAAAGTTTGTAGCACCTCCTCCCTCTCTCTCAGTTCTGCTCCTGCCACGTAAAATGATTGTTCTCACTTTGTCTTCTGCCATGAGTAAAAGCTCCCTGATATCTCCCCAGAAGCAGACGCTGCCATGCTTCCTGTACAGCCAGAGGAACATGAACCAATTAAACCACTTTTCTTTATAAATTACCTAGTTTTAGATATTTCCTTATACTAATGCAAGAACAGACCGATATAGAAAATTGGTACTGTGGAATGGGACATTGCTATAAATATACCAGAAAATGTGGAAGCAGCTTTGGAATTGGGTAATGGGCAGAAGTTGGAAGAGTTTGGAGGGCTCAGAAGAAGACAGGAAGATTAGGAAAAATTTGGAACTTCCTAGAGACTTGTTGAATTGTTGTAACAAAAATGGGGATAGGGATATGGACAATGAAGTCCAGGCTGAGGAAGTCTTAGATGGGAATGAAGAACTTATTGGGAGCTGAAGTAAAGGTCACTTTTGCCATGCTTTAACAAAGAGCTTGGTAGGATTATGCCCCTGCCCAAGGTATCTGTGCAATTTTGAACTTGAGAGTGATGATAGGGTATCTGGCAAAAGAGATTTCTAAGCAGCGAAGTGTTCAAACTGTGTCCTGGCTGCTTGTAACAACAACTATGCTCATATGTGTGAGCAAAGAAATGACCTAAAACTGGAGCTCTTATATTTAAAAGGGAAACAGACTGTAAAAGTTTGAAAAATTTGCATCCCAGCCATGTGGTAGAAAAGAAAAGCCCATTATCAGGGAAGGAATTCAAGCAGGCTGCAGAAATTCACATAAGCTAAAGAAGAGCCAAATGCTCATAAGCAAGACAATGGAGGAAAGGCCTTGAAGGCATTTTAGAGACATTCCGGGCACTCCCTCCATCAAAGGCCTGGAGGTCTAAGAGGGAAGAATGGTTTTATGAACCAGGCCTAGGCCACTGCTGCTCTATGCAGCCTTGGAACACTGCTCCCTGGATCCCAGCCATGCCAGCTCCAGCCATGGCTCACAGGGTACCATGTCCTTAGGCTGCTGCTTCAGAGGGAGTGTTAGTCCATTTTCATGCTGCTGATAAACACATACCAGAGACTGGGAAGAATAAGTTGTTTAATTGGACTTACAGTTAGTTCAACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAGGCAAAAGACACTTCTTACATGGAGGTGGCAAGAGGAACTGAGGAAGATGCAAAAGCAGAAATTCCTCATAAAACCATCAGATTTCATGAGACTTACTTATTCACTACCATGAGAACAGTATGGGGGAAACAATCCCCATGATGTAAATTATCTCCCACTGTGGCCCTCCCACAACACGTAGGAATTATGGGAATACAATTTAAGATAAGATTTGGGTGGAGACACAGAGCCAAACCATATTATTCTGCCCTTGGCCCCTCCAAATCTCATGTCCTCACATCTCAAAACCAATCATGCCTTCCCAACAGTCCCCCAAAGTATTAACTCATTTCAGCATTAATTCAAAAGTCCACAGTCCAAAGTCTTACCTGAGACAAGGCAAGTCCCTTCCACCTATGAGCCTGTAAAATCAAAAGCAAGTTAGTTACTTCCTAGATACAATGGGGGTACGTACCATCATTTAGTAAATATAGCCATTCCAGGGGAAATTGGCCAAACAAAGGGGCTACCAGCCCCGTGCAAGTCCGAAATCCAGCAGGGCAGTCAAATCTTAAAACTCCAAAATGATATCCTTTGACGCCATTTCTTGTGTCTGGGTCACACTGACGGAAGAGGTGGGTTCCCATGGTCTTGGACAGCTCTGCCCCTGTGGCTTTGCAAGGTACAGTCTTCCTTCTGGCTGCTTTCACAGGCTGGTGTTGAGTGTCTGTGGCTTTTCCAGGCACACAGTTCAAGCTGTCAGTGAATCTACCATTCTGGGGTGTGGAGAACAGTGGCCCTTCTGTCACAGATCCACTAGGTGATGCTCCAGTTGGGACTCTGTGGGAGGGCTCCGAACCCCACATTTCCCTTCTGCACTGCCCTAGCAGAGGTTCTTCATGAGCGCCCTGCCCCTGCAGCATTGAGGCATTTCCATACCTCTTCTGAAATCTAGGCAGAGGTTCCCAAACCTCAATTCTTCACTTCTGTGCACCTGCTGGCTCAACACCATGTGGAAGCTTCCAAGGCTTGGGGCTTGCACCCTCTGAAGCCACAGCCCAAGCTCTATGTTGCACCCTCTGAAACCATGGCCCAACCCTCTTACAGCCATGGCTGGAGGAGCTGGGATGCAGGGAGCCAAGTCCCTAGGCTACACACCACATGGGGACCCTGAGTCCAGCCCATGAAACCATTTTCTCCCAGGTCTCCAGGTGTATGATGGGAGGGGCTGCTGTGAAGACCTCTGACATGCCATGGAGATATTTTTCCCATTATTTTGGCAATTAAAATTTGGCTCCTCATTACTTACGCAACATTTTTCTGCAGCTGGCTTAAATTTCTCCTCAGAAAATAGGTTTTTCTTTTCTATCAAATTGTCAGGCTGCAAATTTCCCAAACTTTTATGCTCTGTTTTCCTTTTAAAACTGAATGCTTTGAACAGCACCCAAGTCACCTCTTAAATGTTTTGCTGCTTAGAAATTTCTTCCACCAGATAGCCTAAATCATCTCAAGTTCAAAGTTGCACAAATCTCTAGGGCAGGGGTAAAATGTCACCAGTCTCTTTGCTAAAACATAACAAGAGTCACCTTTGTTTCAGTTCCCAAGAAGTTTCGCATCTCCATCTGAGACCACCTCAGCCTGGACCTTATTGTTCATATCACTATCAGCATTTCTGTCATAGCCATTCAACAAGTCTGGATGTGAGACATGAAATTAAAGAAGAAGATTTTGGAGCTTTAAGTGATTTTCCTGCTGGGTTTCATCCAGATTTCCATGGTTCCTGTAGCCCCTCCTTTTTGGCTGATTTCTCCCTTTTGGAATTGGAATATTTACCCAATGCCTATACCTCCCATGTATCTTGGAAGTAACTAACTTGTTATTGATTTTACAGGCTCATAGGTGGAAGGGACTTGCTTTGTCTCAGATGAGACTTTGGACTTTGGATTTTTTAATTAACGCTAGAATGACTTATGACTTTAGGGCACCGTTGAGAAGGGATGATTGTATTTTGAAATGTGAGAAGGACATAAGATTTGGAGAGGCCAGGAGCGGAATGATATTGTTTGGAGTTGTAATACTCAGTGTTGGAGGTGGGGCCTGGTGGGGTGTGATTGGATCACAGGGGTGGATGTTCTCCTTGGTAATCTGTCAAAATAGTGAGTGAGTTCTCATTATATCTGGTTGTTTAATAATGTGTAGCATCTTTTTCCTCTTTCTTTTGGTCCCGCTTCTGCCATGTGAGACACCTGCTCGTGCTTTGCCTTCTGCCATGAGTAAAAACCCCCTGATGACTCCCCAGAAGCAGACGTTGACATGTTTCCTGTACAGTCTACAAAACCACGAGCAAATTAAACCTCTTTTCTTTATAAATTACCTAGTCTTAGGTATTTATTTTTAGCAATGCAAGAATGGACTAATAATATACCCTCTTTCTTATTCACTCTTTTCTGGTGTTCCTTTAACATACCAAGCATTCTGGGCTTCAGCCTTAGTATCTACCACATCTTCTCTCTGGAATATTCTTTCCCTAAATCTATGTAGGGCTTGTCCTTTACCTTCTTTACTCTGCTCAGATATTACCTTATCAGTGAGGTCTTTTCTGACTAGCTTTTATAGTATGGTACTTTTTTCCCCACTTCTCTTATACCTCATAGCCATATTCTTCTTTAATTTTTTTCCTTAGCACTTAGTCATCATTTAATTATATTTTTATTGGTTTGTCAGCATATCTCTTTACTTATTGTTGGCTAATGAATCCCATCAAAAATTAATAGCTCAGATTAAGCATAATCATTTTATTAACTCTTATGTGGTCTGTGAGCCAGAGTTTCAGAAAGGGCTCTGTTGGATCATCCTGGCTCTGAGTGTCTCATGCAGTTGCAGTGGCATAGTGGCTACAAGTGGGAGAGTAGGGCTGAAGCAGCTTGGGGCTGACCAGTGCAGGTACTAGATAAATATATTTAAGTAAATGAATTAATTAGGTGTTGAATAAGAAAAGACCCTCATGGAAACTTGCCATTCTTATATTCATAAAATATGCACTCTCATTTGCATATCAAATTAAAGAATTTTGCTTTCAATATGTTGAAATGAAAATCACAGATCATGTGTATGTGCAGTGTGTTAAAGAGGTGGCTGTTTGCCCATAGGCTTTCTCACAGATGAATCTAAAATTCAAAGAAGATGCCATTCATATGTTTAAAATGCTTCAAAGCTACCACCTAGGCTAAGGCAGCTCTTTTCAAACTTTTTAAGCCATGGCTCACAGCAAGAATTACATTTTATGTTTTCTCATCACTTCTTAGAACACCAGTCCACAAAAACCCATACTCACTGTGTCTATACACATATTTATTGAAATCAGTGTCATGTATCCAGCAATATGTTTTAATATTTTATCCTCTCCTTTTAGTTTTCTCTCCTCACTTTCATCTTCTTTTCTTTCTTGTTCTTTTCGCTCCTTTTCTTTCTTCCATTCTTTTTCCCTCTGTTTTTTGTTCCCTGTTCTTCTTGCTTCTATTTTGTTCTTTTCTCTTCTTTTTTTTCAGTAACAACAAGCAAACAAAAAACCCAAAACACTACTATGTAGGTCCATTGAATTGATTTGCAGACCTCATAAAGGACCACTATCTGCCCTTGGCTCTTGGTTTCTGCATTAGTCCTGTAGAATTATAACCCTGGGGGCAGCATCCTGAGACTACTTTAAAAGCATCCCAGGCATTCTTTAGAAGTAAACTCTCAGCTAAATCTAAGGTCTAAATAACTTAGTAAACACATGAGACTCTTCATGATCTGATGCCTGTCATTCTTTCTGACCTCATTTTGTACCGCTATTCTTTTCCCACTTAATGTTATAAAAATATTGACATATATGTGACTTTTGCATATACTTTCTACTTGTACTTTTCCCACTACCTGAATCAGTGTATTCCTTTTTCTCACCTGCCTCTTGTTGTTCATCCAGCCCTGCAAACAAAAAGATTTCACAAAAGAAATATACAAACATGTCTTAAACACACGAAAGTATGGGAAACATTAATTTAAAAATGCAACAAGATTCAATTTTCCACTTTGAAAAAGAAAAACTGTGTAAAACATTCTATTGGCCAAGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3017:HG2_PB_pbsv_718:HG4_PB_HySA_1047:HG3_PB_pbsv_734:HG2_10X_SVrefine210Xhap12_557:HG3_PB_SVrefine2PBcRDovetail_418:HG4_PB_SVrefine2PBcRDovetail_396:HG4_Ill_SVrefine2DISCOVARDovetail_505:HG2_PB_SVrefine2PBcRplusDovetail_483:HG2_PB_SVrefine2PB10Xhap12_599:HG2_Ill_SVrefine2DISCOVARplusDovetail_564:HG2_PB_SVrefine2Falcon1plusDovetail_482:HG3_PB_SVrefine2Falcon1Dovetail_412:HG4_PB_pbsv_724:HG2_PB_HySA_1362:HG2_PB_PB10Xdip_48;NumClusterSVs=16;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_505:HG4_PB_SVrefine2PBcRDovetail_396;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0487534;ClusterMaxSizeDiff=0.0483826;ClusterMaxEditDist=0.22206;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=5279;DistBack=29185;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=1:104480854-104480855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=239.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:1/1:0:40:0:28:1/1:0:11:0:19:1/1:0:44:1/1:0:648:.:5229:.
chr1	105231103	HG4_Ill_GATKHCSBGrefine_483	C	CAGTATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCG	20	PASS	ClusterIDs=HG3_PB_HySA_1064:HG3_PB_pbsv_741:HG4_PB_pbsv_727:HG2_PB_assemblyticsfalcon_1044:HG3_PB_assemblyticsfalcon_994:HG3_PB_SVrefine2Falcon1Dovetail_416:HG2_PB_pbsv_723:HG3_PB_SVrefine2PBcRDovetail_421:HG2_PB_SVrefine2Falcon1plusDovetail_486:HG3_Ill_MetaSV_178:HG3_Ill_GATKHCSBGrefine_448:HG2_Ill_MetaSV_197:HG4_PB_SVrefine2Falcon1Dovetail_456:HG4_Ill_MetaSV_201:HG4_Ill_GATKHCSBGrefine_483;NumClusterSVs=15;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_483:HG4_Ill_MetaSV_201:HG4_PB_SVrefine2Falcon1Dovetail_456;NumExactMatchSVs=3;ClusterMaxShiftDist=0.151079;ClusterMaxSizeDiff=0.151079;ClusterMaxEditDist=0.201439;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=136;DistBack=11640;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=1:105231104-105231111;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9927;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:0|1:32:1:1:31:0|1:20:0:0:12:0/1:23:7:./.:.:.:.:.:.
chr1	106113955	HG2_10X_SVrefine210Xhap12_568	A	AATATGGACCATATTCAGTTAATCTTTCCATTATAAGGTTGTATTAAATTAAGTTGCATTAATAAGAATACTTACATAATTTATATATTTCCTAAGAGTATTAATGATAGAGGCCTTTAAAGTTTTCACTTACATTTTTGATCTTTGCTCTGTTTGCACACTAATCTAGAAGGTAAATATGTATAGCTATATTTTTGTGAGTGATGTTATCAAATGGCTTGATATTTTAAAAATGAGAGTATACTACACAATTATTCTGGTTTGTTGTACTTGTTGTTGCTATTTTAACTTAAGAATACATTCTTGTCCTTGCGATAGTTTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTGTATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGCTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCACAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAATACGTTGGGTATATACCCAGTAATGGGATCACTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGTCCTCAGGGATCACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATCGTCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGCACGTTGTGCACATGTACCCTAAAACTTAAAGTATAATTTAAAAAAGACCCCCCCAAAACAAACAAAAAAACAAACGAACAAAAGAATACATTCTTAAAGTCTTTCTAGTCCAAATTTTATTAAGAGCTCCAAATTAGCATGTTACAAATACCACGCTGTTTACCAAAGTCTTCTCTATTATTGAGACTTCAGGTCTCCTGATTTTGCCAATAAAATAACAAGCTTATAAACGTGTTTCTATACAGAGCTTATATGACAAATCATTTTACTGCAAGTGCTTTTACAGCAACATGGTGCTTAAAATGAAATGTTAAGAGGTAAATTTATTTTTCAATTTGAATATATTAATTCAGATTTCCCTCCTAAAATGTTGAAGAAATTGGTCAATCTTTACGCACATTAGAATTATCTGCCTTGTACCTACTAGTGGAAATCACTTTTCTTTGCAAATATTTTGCCATCTAATGGGCAATAGTGATATATCATAATAATTTAACTTGAATTTCTAATTCTTGTCAAAGTAGTTGCTATATTTTTGGTCTTTAGATATTTTGATAATTTTTACATATTTTTGAATACTTTACCTACTAATATATAGAGGCTCAAAGCACATTAGGAAAGTGAACTATCTGGTTGCTATTTTGCCATATTTTCCCATATTATTTTAATTTCACTTTTATTGACGTGTCAAAAGTTGTGCATGATCCAGCTTTCTTGTTATTTATTTTCAGACACAAGAGTAATTGGTGTTTTTTTAAGAAGCATATGTTTAACCCATATAATAGAATACACTTCTATTTCCATCTAATAGAAATATTGCTCATGGTTATACAATAGTTTGCCAGATAAACATAAATCAATTTATACTGATTGTTATATTATTTTGTGTTAACATTCAAAAGACTAACACCTCAAAAAATTAGTCTCAAAACCTCCTGTTGTAAAAAAAATTTAAGTAAATATTGTATACTTCTCTCTTGTGTCATCATGCTTTACATCTTTAATAATATTTATTTTATATAACAAGTATATATTCTGATATGTATATTCCAACACCTTTCATAGGTTTTGTTACAATTTTCCAGAGAATAACTTTTCATTTTCTTTGGAACCAACATATTATATTACAATTATTTTAATATATATGCTTTTATCCCTCCATCTTAGTAAGTTATCTTAGTAACTCTAGTAATTTTACAAGGTCTTCCTGTTTTTGTCACATACAATTATACTATTCATAACTCCTGATGATTTGGGTGTTAACACAAGTATGCTAATTATAATTTCATTACAGTACCTTTAGCTTTCTTCAATCATAGCTAATAATATTTGTTATAGTAGAAATGTTTATTTTACTGGAATTTTGATGAAAATTGCTTCAGTATTTTGTTATTTAGTAAAAAATTTCCTGTTGATCTTTGGTAAATTTCCTTTAATATATTTATTTATTTTCATTTTACTAACTTTTTT	20	PASS	ClusterIDs=HG4_PB_HySA_1065:HG2_PB_pbsv_728:HG2_PB_PB10Xdip_59:HG4_PB_SVrefine2PBcRDovetail_399:HG4_Ill_SVrefine2DISCOVARDovetail_514:HG3_PB_SVrefine2PBcRDovetail_426:HG2_PB_SVrefine2PBcRplusDovetail_488:HG2_PB_SVrefine2PB10Xhap12_608:HG2_PB_SVrefine2Falcon1plusDovetail_490:HG2_Ill_SVrefine2DISCOVARplusDovetail_577:HG2_10X_SVrefine210Xhap12_568:HG4_PB_SVrefine2Falcon1Dovetail_462:HG3_PB_SVrefine2Falcon1Dovetail_421:HG2_PB_HySA_1387;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_568:HG2_Ill_SVrefine2DISCOVARplusDovetail_577:HG2_PB_SVrefine2Falcon1plusDovetail_490:HG2_PB_SVrefine2PB10Xhap12_608:HG2_PB_SVrefine2PBcRplusDovetail_488:HG3_PB_SVrefine2PBcRDovetail_426:HG4_Ill_SVrefine2DISCOVARDovetail_514:HG4_PB_SVrefine2PBcRDovetail_399;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0532583;ClusterMaxSizeDiff=0.0532583;ClusterMaxEditDist=0.132428;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=2260;DistBack=8429;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:106113956-106113956;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:103:1/1:0:14:0:22:1/1:0:14:0:22:1/1:0:45:./.:13:213:.:1966:.
chr1	106330923	HG4_PB_pbsv_737	T	TTTATTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTGAGACGGAGTCTCGCTCTTATCGGCCCAGGGCTGGAGTGCAGTGGGCGCGATTCTCGGGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCGCATTCTTCCTGCCTCAGCTCCGAGTAGGCTGGGACTACAGGCGCCACAGCCACTACGCCCGGCCTAATTTTTTGTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_423:HG3_PB_HySA_1087:HG4_PB_pbsv_737:HG2_PB_pbsv_731:HG3_PB_pbsv_752:HG2_PB_HySA_1389:HG4_Ill_MetaSV_204:HG4_PB_HySA_1069:HG2_PB_SVrefine2Falcon1plusDovetail_492:HG3_PB_SVrefine2PBcRDovetail_428;NumClusterSVs=10;ExactMatchIDs=HG4_PB_pbsv_737;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115578;ClusterMaxSizeDiff=0.110553;ClusterMaxEditDist=0.244389;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=206;DistBack=3;DistForward=22430;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=182;REFWIDENED=1:106330744-106330925;PctSeqSimilarity=0.9541;PctSizeSimilarity=0.9612;PctRecOverlap=0.9614;SizeDiff=8;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=95;MatchId=242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:0|1:23:0:2:29:0|1:16:0:0:7:0/1:21:6:./.:.:.:.:.:.
chr1	106396412	HG2_PB_assemblyticsfalcon_1061	CAACCCCCCAAATTC	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3018:HG2_PB_HySA_1391:HG2_PB_pbsv_732:HG2_PB_assemblyticsPBcR_1043:HG4_PB_pbsv_738:HG4_PB_HySA_1070:HG2_PB_HySA_1390:HG2_PB_SVrefine2PB10Xhap12_609:HG2_PB_SVrefine2PBcRplusDovetail_489:HG2_PB_assemblyticsfalcon_1061:HG4_PB_SVrefine2PBcRDovetail_401;NumClusterSVs=11;ExactMatchIDs=HG2_PB_assemblyticsfalcon_1061;NumExactMatchSVs=1;ClusterMaxShiftDist=0.131593;ClusterMaxSizeDiff=0.131593;ClusterMaxEditDist=0.19563;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=873;DistBack=43037;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:106396427-106396411;PctSeqSimilarity=0.9856;PctSizeSimilarity=0.9562;PctRecOverlap=0.9715;SizeDiff=-40;StartDistance=0;EndDistance=14;GTMatch=0;TruScore=97;MatchId=243.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:18:41:0|1:21:2:0:37:./.:5:5:42:0:0/1:42:5:0/1:43:144:.:.:.
chr1	106485854	HG3_PB_SVrefine2Falcon1Dovetail_424	T	TTCCTGTTGGACAGAGTCCTGTTATCATTATATAATGTCCCTCTTTGTCTTTTTTAATGACTGTTTTTTTCCTTTTATTATTATTTTTTATTATACTTTAAGTTCTACGGTACATGTACACAACATG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_424:HG4_PB_pbsv_739:HG2_PB_HySA_1392:HG4_PB_HySA_1071:HG2_PB_pbsv_733:HG3_Ill_250bpfermikitraw_888:HG3_PB_pbsv_753:HG3_PB_HySA_1088:HG4_PB_SVrefine2Falcon1Dovetail_464:HG3_PB_SVrefine2PBcRDovetail_429;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_424:HG3_PB_SVrefine2PBcRDovetail_429;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0757576;ClusterMaxEditDist=0.227941;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=126;DistBack=89411;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=126;REFWIDENED=1:106485855-106485980;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9844;PctRecOverlap=0.9225;SizeDiff=-2;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=96;MatchId=244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:31:0|1:24:0:1:32:./.:3:1:1:28:0/1:19:20:./.:.:.:.:.:.
chr1	106505924	HG4_PB_pbsv_741	C	CCCATTTATATATGTGTGTATATATACGTATAATATAATACGTTATAATGTTGTGTATATATACGTAATATATATACGTATATATGTGTGTATATATACGTATAATATAACGTAATATATGTGTGTATATATAGGTATAATATAATACGTTCATATATGTGTGTATATATACGTATATATATACGTATATATGTGATGTATATATACACGTATTTATACTATATATGTGTGTATATATACGTAATATATACGTATGTGTGTATATATACGTATATACACATATATATGTGTGTATATATGTATATACACAGATATAATGTGTGTATATATGTATATACCACATATATATGTGTGTATATATGTATATAGAACATATATATGTGTGTATATATGTGTGTATATATGTTTAATATTACAACACATATATGTGTGTATATATGTATTATACAGCATATATGTGTGTATATATTCTACATATATCCCACATATATGTTGTGTATATATTCACATATATACACATATATGTTGTGTATATATTCACATATATACAACAATGTGTGTATATATTCACATATATACACATATATGTGTGTATATATTATCACATATATACACATATATGTGTGTATAATATTCACAAATATATAACATAATATGTGTAATATTCAACATATATACACATATATATGTGTGTATATATTCACGTATATATAAATATAATATGTGTAATATATATACGTATATATACATATAGATGTGTATATAATGTAATA	20	PASS	ClusterIDs=HG4_PB_pbsv_741:HG3_Ill_MetaSV_183:HG3_PB_pbsv_755:HG2_PB_pbsv_735:HG4_PB_SVrefine2PBcRDovetail_403:HG2_Ill_SVrefine2DISCOVARplusDovetail_580:HG2_PB_assemblyticsPBcR_1045:HG2_PB_assemblyticsfalcon_1063:HG3_PB_assemblyticsfalcon_1016:HG4_PB_SVrefine2Falcon1Dovetail_466:HG2_PB_SVrefine2PBcRplusDovetail_491:HG2_PB_SVrefine2Falcon1plusDovetail_494:HG2_PB_SVrefine2PB10Xhap12_612:HG3_PB_SVrefine2PBcRDovetail_431:HG3_PB_SVrefine2Falcon1Dovetail_426;NumClusterSVs=15;ExactMatchIDs=HG4_PB_pbsv_741;NumExactMatchSVs=1;ClusterMaxShiftDist=0.221147;ClusterMaxSizeDiff=0.221147;ClusterMaxEditDist=0.282337;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=772;DistBack=1887;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:106505925-106505924;PctSeqSimilarity=0.9535;PctSizeSimilarity=0.9611;PctRecOverlap=0.9612;SizeDiff=30;StartDistance=-5;EndDistance=-5;GTMatch=1;TruScore=95;MatchId=245.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:1/1:0:21:0:15:./.:2:4:9:3:0/1:13:18:./.:19:186:.:1171:.
chr1	108097955	HG4_Ill_GATKHC_1083	G	GTTTACATTTTATTTTATTTTATTTTTTTTTTCCTTTCTTTTTTTTTTTAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_406:HG2_PB_pbsv_738:HG4_PB_pbsv_744:HG4_Ill_svaba_848:HG4_Ill_Krunchall_944:HG4_Ill_GATKHC_1083:HG4_Ill_GATKHCSBGrefine_491:HG4_Ill_FB_615:HG4_Ill_250bpfermikitraw_910:HG4_Ill_150bpfermikitraw_865:HG4_CG_vcfBeta_458:HG2_Ill_SpiralSDKrefine_640:HG2_Ill_Krunchall_905:HG2_Ill_GATKHC_1088:HG2_Ill_GATKHCSBGrefine_449:HG2_Ill_FB_627:HG2_Ill_250bpfermikitraw_910:HG2_Ill_150bpfermikitraw_817:HG2_CG_vcfBeta_412:HG2_Ill_svaba_845:HG4_PB_HySA_1075:HG2_Ill_breakscan11_3019:HG2_PB_HySA_1409:HG2_10X_SVrefine210Xhap12_575:HG2_PB_SVrefine2Falcon1plusDovetail_498;NumClusterSVs=25;ExactMatchIDs=HG2_CG_vcfBeta_412:HG2_Ill_150bpfermikitraw_817:HG2_Ill_250bpfermikitraw_910:HG2_Ill_FB_627:HG2_Ill_GATKHCSBGrefine_449:HG2_Ill_GATKHC_1088:HG2_Ill_Krunchall_905:HG2_Ill_SpiralSDKrefine_640:HG4_CG_vcfBeta_458:HG4_Ill_150bpfermikitraw_865:HG4_Ill_250bpfermikitraw_910:HG4_Ill_FB_615:HG4_Ill_GATKHCSBGrefine_491:HG4_Ill_GATKHC_1083:HG4_Ill_Krunchall_944:HG4_Ill_svaba_848;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0980392;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.176471;PBcalls=6;Illcalls=16;TenXcalls=1;CGcalls=2;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=2;HG2count=14;HG3count=0;HG4count=11;NumTechs=4;NumTechsExact=2;SVLEN=50;DistBack=14671;DistForward=19666;DistMin=14671;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=1:108097951-108097967;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:35:./.:15:21:26:4:1|0:0:23:24:0:0/1:31:25:./.:.:.:.:.:.
chr1	108142466	HG3_PB_SVrefine2Falcon1Dovetail_430	A	ACTGAACTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCTCCCAAAGTGCTGGGATTACAGGCGTGAGC	10	PASS	ClusterIDs=HG4_PB_HySA_1076:HG4_PB_pbsv_745:HG2_PB_pbsv_739:HG2_PB_assemblyticsfalcon_1069:HG3_PB_assemblyticsfalcon_1026:HG2_PB_SVrefine2Falcon1plusDovetail_499:HG3_PB_SVrefine2Falcon1Dovetail_430:HG4_PB_SVrefine2Falcon1Dovetail_470:HG4_PB_SVrefine2PBcRDovetail_407:HG2_PB_HySA_1410;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_430;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115702;ClusterMaxSizeDiff=0.115702;ClusterMaxEditDist=0.158678;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=302;DistBack=0;DistForward=10;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:108142467-108142479;PctSeqSimilarity=0.9951;PctSizeSimilarity=0.9902;PctRecOverlap=0.9934;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:36:0|1:36:1:1:28:1|0:0:10:24:0:0/1:24:10:0/1:8:31:.:.:.
chr1	108567552	HG3_PB_pbsv_759	C	CAAAAAAAAAAATGGGAGCCGAGGCGGGTCGGATCACGAGGTCAGGATATCGAGACATCCGGCTAAATACGGTGAAAAACCACCGTCTCTACCAAAAATACAAAAAATTAGCGCGGGCGGTAGTGGCGGGCCGCCTGTAAAGTCCAAGCTACTTGGAGCTGAGAGGCAGGAGAAGGCGTGAACACGCTCCGGAGGCGGAGCTGAACAGTGAGCCGAGATCCGCCAACTGCATCTCCAGCTGGGTGACAGAGCGAGACTCCGTCCTCACAAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_202:HG4_PB_pbsv_747:HG3_PB_SVrefine2Falcon1Dovetail_431:HG2_PB_pbsv_741:HG4_PB_SVrefine2Falcon1Dovetail_471:HG3_PB_SVrefine2PBcRDovetail_434:HG3_Ill_GATKHCSBGrefine_458:HG3_Ill_MetaSV_185:HG3_PB_pbsv_759:HG2_PB_HySA_1418:HG3_PB_assemblyticsfalcon_1028:HG4_Ill_MetaSV_207;NumClusterSVs=12;ExactMatchIDs=HG3_PB_pbsv_759;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0846154;ClusterMaxSizeDiff=0.0846154;ClusterMaxEditDist=0.183521;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=270;DistBack=-1;DistForward=8;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=1:108567553-108567563;PctSeqSimilarity=0.9394;PctSizeSimilarity=0.9481;PctRecOverlap=0.9483;SizeDiff=14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=249.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:35:0|1:24:1:2:32:0|1:14:0:0:8:0/1:10:6:./.:.:.:.:.:.
chr1	109209199	HG2_Ill_150bpfermikitraw_825	G	GAGTAATATAATTTTAATATATTACTAATATATTACTCTAATAATATAATATA	20	PASS	ClusterIDs=HG2_PB_HySA_1427:HG4_Ill_GATKHC_1090:HG2_PB_HySA_1428:HG3_Ill_GATKHC_1148:HG2_Ill_GATKHC_1098:HG4_Ill_manta_172:HG4_Ill_Cortex_140:HG3_Ill_manta_143:HG3_Ill_Spiral_731:HG3_Ill_Cortex_152:HG2_Ill_manta_189:HG2_Ill_SpiralSDKrefine_648:HG2_Ill_Cortex_291:HG2_PB_PB10Xdip_76:HG4_PB_pbsv_750:HG2_PB_pbsv_746:HG4_Ill_svaba_854:HG4_Ill_250bpfermikitraw_917:HG4_Ill_150bpfermikitraw_871:HG3_Ill_svaba_883:HG3_Ill_250bpfermikitraw_904:HG3_Ill_150bpfermikitraw_857:HG2_Ill_svaba_851:HG2_Ill_250bpfermikitraw_915:HG2_Ill_150bpfermikitraw_825:HG4_Ill_Krunchall_951:HG3_Ill_Krunchall_942:HG2_Ill_Krunchall_910:HG4_PB_assemblyticsfalcon_1024:HG3_PB_assemblyticsfalcon_1031;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_825:HG2_Ill_250bpfermikitraw_915:HG2_Ill_svaba_851:HG3_Ill_150bpfermikitraw_857:HG3_Ill_250bpfermikitraw_904:HG3_Ill_svaba_883:HG4_Ill_150bpfermikitraw_871:HG4_Ill_250bpfermikitraw_917:HG4_Ill_svaba_854;NumExactMatchSVs=9;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.271845;PBcalls=7;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:109209198-109209201;PctSeqSimilarity=0.9505;PctSizeSimilarity=0.9038;PctRecOverlap=0.8868;SizeDiff=5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=91;MatchId=250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:73:1/1:3:19:2:16:1/1:0:19:1:24:1/1:0:54:./.:.:.:.:.:.
chr1	109232230	HG2_Ill_GATKHC_1099	T	TAACATTATATATATATATATATATATATATATATATATATATATATATATATATATAATGTG	20	PASS	ClusterIDs=HG4_PB_HySA_1083:HG2_PB_pbsv_748:HG4_PB_pbsv_752:HG2_PB_assemblyticsfalcon_1076:HG2_PB_assemblyticsPBcR_1062:HG4_PB_assemblyticsfalcon_1026:HG3_PB_assemblyticsfalcon_1033:HG2_PB_PB10Xdip_78:HG3_PB_pbsv_766:HG3_Ill_SVrefine2DISCOVARDovetail_461:HG2_Ill_manta_190:HG2_Ill_SVrefine2DISCOVARplusDovetail_589:HG2_Ill_150bpfermikitraw_826:HG2_10X_SVrefine210Xhap12_578:HG3_PB_SVrefine2PBcRDovetail_436:HG2_PB_SVrefine2PBcRplusDovetail_499:HG2_PB_SVrefine2PB10Xhap12_622:HG2_PB_SVrefine2Falcon1plusDovetail_504:HG4_PB_SVrefine2PBcRDovetail_411:HG4_PB_SVrefine2Falcon1Dovetail_474:HG4_Ill_manta_173:HG4_Ill_250bpfermikitraw_918:HG3_Ill_manta_144:HG3_Ill_Spiral_732:HG3_Ill_GATKHC_1149:HG3_Ill_GATKHCSBGrefine_462:HG3_Ill_150bpfermikitraw_858:HG2_Ill_GATKHC_1099:HG2_Ill_GATKHCSBGrefine_456:HG2_Ill_250bpfermikitraw_916:HG4_Ill_SVrefine2DISCOVARDovetail_526:HG4_Ill_GATKHC_1091:HG4_Ill_GATKHCSBGrefine_497:HG4_Ill_150bpfermikitraw_872:HG3_PB_SVrefine2Falcon1Dovetail_435:HG2_PB_HySA_1429:HG3_PB_HySA_1106:HG2_Ill_breakscan11_3020;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_250bpfermikitraw_916:HG2_Ill_GATKHCSBGrefine_456:HG2_Ill_GATKHC_1099:HG3_Ill_150bpfermikitraw_858:HG3_Ill_GATKHCSBGrefine_462:HG3_Ill_GATKHC_1149:HG3_Ill_Spiral_732:HG3_Ill_manta_144:HG4_Ill_250bpfermikitraw_918:HG4_Ill_manta_173:HG4_PB_SVrefine2Falcon1Dovetail_474:HG4_PB_SVrefine2PBcRDovetail_411;NumExactMatchSVs=12;ClusterMaxShiftDist=0.251969;ClusterMaxSizeDiff=0.251969;ClusterMaxEditDist=0.260163;PBcalls=18;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=62;DistBack=13519;DistForward=57500;DistMin=13519;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=1:109232231-109232232;PctSeqSimilarity=0.9474;PctSizeSimilarity=0.8986;PctRecOverlap=0.913;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=91;MatchId=251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:61:1/1:4:33:0:5:1/1:0:6:0:7:1/1:0:27:./.:.:.:.:.:.
chr1	110267720	HG2_PB_SVrefine2PB10Xhap12_630	G	GGGAGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_772:HG2_PB_SVrefine2PBcRplusDovetail_505:HG2_PB_SVrefine2PB10Xhap12_630:HG4_PB_SVrefine2PBcRDovetail_418:HG4_Ill_SVrefine2DISCOVARDovetail_533:HG2_PB_HySA_1444:HG2_PB_PB10Xdip_84:HG2_PB_pbsv_755;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_630:HG2_PB_SVrefine2PBcRplusDovetail_505;NumExactMatchSVs=2;ClusterMaxShiftDist=0.137255;ClusterMaxSizeDiff=0.137255;ClusterMaxEditDist=0.233503;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=99;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=63;REFWIDENED=1:110267682-110267744;PctSeqSimilarity=0.963;PctSizeSimilarity=0.9612;PctRecOverlap=0.9223;SizeDiff=-4;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=94;MatchId=252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:2:20:1:18:./.:2:6:3:4:0/1:3:9:./.:.:.:.:.:.
chr1	110663084	HG2_PB_SVrefine2PB10Xhap12_631	A	ACACCATCACCACCATCACCACCACCACCACCATCACCACCACCGCCACCACCATCACCACACACTACCACCATCACTACCACCACCATCACCATCACCACCACCACCATCACCACCAGCACCATCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCATCACCACCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCACAACCATCACCACCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCACCAGCAGCATCACCACCACCACCACCACCATCGCCACCACCACCACCACACCCACCACCACCACCACCACCACCACCACCACCACCACCCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACATCACCACCACCACCACCACCCACCACCACCACCACCACCACCACCATCACCACCCATCACCACCACCACCACCACCACCATCACCACCACCACCACCACCAGCAGCATCACCACCAACACCACCACCACCACTACCACCATCACCATCAACACCACCATCACCACCACCACCACCACCAGCATCACCACTAACACCATCACCACCACCACCACCATCACCACCACCACCAACACCACCATCACCACCACCATCACCACACACTACCATCACTACCACCACCATCACCATCACCACCATCACCACCACCACCATGATCACCACCATCACCACCACCACCACCATCACCATCACCATCACCACCACCACCACCACCACCACTACCACCATCACCACCACCACCACCACCATCACCACCACCACCACCAGCATCACCACCAACACCCCACCACCACCACCATCACCACCACCACCACCACTGCCACCACCGCCACCACCACCGCCAGCATCACCACCATCACCACCACCACCATCACCACCACCACCACCAGCATCACCACCAACACCACCACCACCAGCATCACCATCAACACCACCAGCACCACCACCACCAGCATCACCATCAACACCACCATCACCACCACCATCACCACCACCACCAGCATCACCATCAACACCACGAGCACCACCACCACCACCAGCATCACCACCAACACCACCATCACCATCACCACCACCATCACCACCAGCATCACCACCACCACTACCACCACCACCACTACCACCACCACCATCACCATCACCATCACCACCATCACCACCACCACCACCACCAGCATCACCACCGCCACCACCACCATCACCACCACCGCCACCGCCACCACCATCACCACCACCACCACCATCACCACCAGCACCACCAGCACCACCACCATCACCACCAGCATCACCACCAACACCACCATCACCACCAGCATCAGCACCAACACCACCACCACCACCGTCACCACCACCACCACCAGCAGCATCACCACCAATACCACCACCACCACCAGCATCACCATCAACACCACCATCACCACCAGCATCACCACTAACACCACCATCACCACCACCACCATCACCACCACCACCAAAACCACCATCACCACCACCATCACCACACACTACCACCATCACTACCACCACCATCACCACACACTACCACCATCACCACCACCACCATCATCACCACCATCACCACCACCACCACCACCATCACCATCACCATCACCATCACCACCACCACCACCATCACCATCACCACCACCACCACCACCATCACCATCACCACCACCACCACCACCACTACCACCATCACCACCACCACCACCAAGACCATCACCACCACCACCACCAGCATCACCACCAACACCCCACCACCACCATCACCACCACCACCATCACCACCACCACCGCCACCGCCACCACCGCCACCGCCACCCACCACCACCACCATCACCACCACCACCACCATCACCACCACCACCACCACCACCAGCATCACCACTAACACCACCATCACCACCACCACCATCACCACCACCACCAACACCACCATCACCACCACCATCACCACACACTACCATCACTACCACCACCATCACCATCACCACCATCACCACCACCACCATGATCACCACCATCACCACCACCACCACCATCACCATCACCATCACCACCACCACCACCATCACCATCACCACCACCACCACCACCACCACTACCACCATCACCACCACCACCACCACCATCACCACCACCACCACCAGCATCACCACCAACACCCCACCACCACCACCATCACCACCACAACCACCACCACCACCAGCATCACCACCACCACCACCGCCACCACTGCCACCACCACCGCCAGCATCACCACCATCACCACCACCACCATCACCACCACCACCACCAGCATCACCACCAACACCACCACCACCACCACCAGCATCACCATCAACACCACCAGCACCACCACCACCCATCACCATCAACACCACCACACCACCACCATCACCACCACCACCAGCATCACCATCAACACCACGAGCACCACCACCACCACCAGCATCAACACCAACACCACCATCACCATCACCACCACCATCACCACCACATCACCACCACCACTACCACCACCACCATCACCACCACCACTACCACCACCACCATCACCATCACCATCGCCACCATCACCACCACCACCACCAGCATCACCACCGCCACCACCACCATCACCACCACCGCCACCGCCACCACCATCACCACCAGCACCACCACCATCACCACCAGCATCACCACCAACACCACCATCACCACCAGCATCAGCACCACCACCACCACCACCACCACTACTGTCACCACCACCACCACCACCACCACCACCATCACCACCACCACCAGCAGCATCACCACCAATACCACCACCACCACCACCAGCATCACCATCAACACCACCATCACCACCAGCATCACCACTAACACCACCATCACCACCACCACCATCACCACCACCACCAAAACCACCATCACCACCACCATCACCACACACTACCACCATCACTACCACCATCACCATCACCACCATCACCACCACCACCACCATCACCACCACCATTACCACCATCACCATTACAATCACCATCACCACCACCACCACCACCATCACCATCACCACCACCACCACCACCACCACTACCACCATCACCACCACCACCAAGACCATCACCACCACCACCACCAGCATCACCACCAACACCCCACCACCACCACCATCACCACCACCACCATCACCGCCACCACCGCCACCGCCACCACCGCCACCACCGCCACCGCCACCACCACCACCACCGCCACCGCCACCACTGCCACCACCACCACCAGCATCACCACCATCACCACCACCACCACCAGCATCACCACCGCCACCACCGCCACCACCATCACCTCCATCACCACCATAACCACCACCATCACCATCAACACCACCAGCACCACCACCACCACCAGCATCACCACCAACACCACCATCACCATCACCACCACCATCACCACCACCACCAGCATCACCATCAACACCACCAGCACCACCACCACCACCAGCATCACCACCAACACCACCATCACCATCACCACCACCATCACCACCACCACCACCAGCATCACCACCACCACTACCACCACCATCACCACCACCACTACCACCATCACCATCACCATCACCACCACCATCACCACCATCACCACCACCACCACCAGCATCACCGCCGCCATCACCACCATCACCACCACCGCCACCGCCACCACCATCACCACCACCACCACCACCACCAGCACCACCACCACCACCATCACCACCACCACTACCGTCACCACCACCACCACCAACACCACCACCATCACCACCACCACCACCACCATCACCACCGCCACCACCATAACCACCACCATCACCATCACCAGCACCAGCACCACCACCACCAGCATTACCACCAACACCACCATCACCACCACCATCACCAGCATCACCACCACCACCATCACCACCTTCACCACCACCATCACCACCACTACCATCACCACCACCAACACCACCACCATCACCATCACCACCACCAGCATCACCACCACCACCATCACCACCATCACCACCACCACCATCACCACCACCACCACCATAACCACCACCACCACCATCACCACCACCACCATCACCACCACCATCATCACCAGCACCACCACCACCACCACCACCAGCATCACCACCACCACCACCATCATCACCAGCACCACCACCACCAGCATCACCACCAACACCACCACCAGCATCGCCATCACCACCACCACCATCGCCACTACCACCACCATCACCACCACCACCGTCACCACCACCATCGCCACCACCACCACCACCACTATCACCACCACCATCGCCATCACCATCACCACCACCATCACCACCAACACCGTCACTACCACCACCATCACCACCAACACCACTATCGCCATCACCACCACCATCACCACCAACACCACTATCGCCATCACCACCACCATCACCACGAGCATCACCATCACCATCACCACCACCATCACCATCACCATCACCACCACCACCACCACCACCATCACTACCACCACCACCACCATCACCACCACCAACACCGTCACCACCACCACCACCACCAACACCGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_482:HG2_Ill_breakscan11_3021:HG2_PB_PB10Xdip_85:HG3_PB_assemblyticsfalcon_1049:HG4_PB_assemblyticsfalcon_1041:HG2_PB_SVrefine2PBcRplusDovetail_506:HG2_PB_SVrefine2PB10Xhap12_631:HG2_PB_SVrefine2Falcon1plusDovetail_512;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_631;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0846268;ClusterMaxSizeDiff=0.0846268;ClusterMaxEditDist=0.105677;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=4766;DistBack=10937;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=192;REFWIDENED=1:110663085-110663276;PctSeqSimilarity=0.9885;PctSizeSimilarity=0.9969;PctRecOverlap=0.9817;SizeDiff=15;StartDistance=-79;EndDistance=-79;GTMatch=1;TruScore=98;MatchId=253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:33:0:21:./.:1:8:0:5:./.:0:4:1/1:0:582:.:4958:.
chr1	110852775	HG2_Ill_150bpfermikitraw_844	G	GACACCCCCACAGCTGTTACCCAGCGCCACACACAGAGCAGACGCTGAATCACTGCTTATTGACTGAATCAGCAATGGGGT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_89:HG4_Ill_Cortex_144:HG3_Ill_Cortex_155:HG2_Ill_Cortex_295:HG4_PB_pbsv_764:HG4_PB_HySA_1103:HG3_PB_pbsv_774:HG4_Ill_svaba_873:HG2_PB_pbsv_756:HG2_PB_HySA_1449:HG4_Ill_manta_174:HG4_Ill_Krunchall_973:HG4_Ill_GATKHC_1111:HG4_Ill_GATKHCSBGrefine_503:HG4_Ill_250bpfermikitraw_939:HG4_Ill_150bpfermikitraw_892:HG3_Ill_svaba_901:HG3_Ill_manta_147:HG3_Ill_Spiral_745:HG3_Ill_Krunchall_964:HG3_Ill_GATKHC_1173:HG3_Ill_GATKHCSBGrefine_472:HG3_Ill_250bpfermikitraw_927:HG3_Ill_150bpfermikitraw_877:HG2_Ill_svaba_869:HG2_Ill_manta_194:HG2_Ill_SpiralSDKrefine_658:HG2_Ill_Krunchall_930:HG2_Ill_GATKHC_1120:HG2_Ill_GATKHCSBGrefine_469:HG2_Ill_250bpfermikitraw_937:HG2_Ill_150bpfermikitraw_844;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_844:HG2_Ill_250bpfermikitraw_937:HG2_Ill_GATKHCSBGrefine_469:HG2_Ill_GATKHC_1120:HG2_Ill_Krunchall_930:HG2_Ill_SpiralSDKrefine_658:HG2_Ill_manta_194:HG2_Ill_svaba_869:HG3_Ill_150bpfermikitraw_877:HG3_Ill_250bpfermikitraw_927:HG3_Ill_GATKHCSBGrefine_472:HG3_Ill_GATKHC_1173:HG3_Ill_Krunchall_964:HG3_Ill_Spiral_745:HG3_Ill_manta_147:HG3_Ill_svaba_901:HG4_Ill_150bpfermikitraw_892:HG4_Ill_250bpfermikitraw_939:HG4_Ill_GATKHCSBGrefine_503:HG4_Ill_GATKHC_1111:HG4_Ill_Krunchall_973:HG4_Ill_manta_174:HG4_Ill_svaba_873;NumExactMatchSVs=23;ClusterMaxShiftDist=0.130952;ClusterMaxSizeDiff=0.119048;ClusterMaxEditDist=0.289017;PBcalls=6;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=80;DistBack=34179;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=1:110852776-110852777;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=254.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:1:18:1:17:1/1:0:19:0:29:1/1:0:50:./.:.:.:.:.:.
chr1	111802590	HG4_Ill_MetaSV_215	T	TAAAAAAGTGTAGGGGTGGGTTGCCCCTACACACCTGTGGGTGTTTCTCATAAGGTGGGACGAGAGATTTGGAAAAGAAAAAGACACAGAGACAAAGTATAGAGAAAGAAATAAGGGGACCCGGGGAACCAGCGTTCAGCATATGGAGGATCCCGCCAGCCTCTGAGTTCCCTTAGTATTTATTGATCATCCGTGGGTGTTTCTCAAAGAGGGGGATGTGTCAGGGTCACAAGACAATTGTGGGGAGAGGGTCAGCAGACAAACACGTGAACAAAGGTCTTTGCATCATAGACAATGTAAAGGATTAAGTGCTGTGCTTTAGATATGCATACACATAAACATCTCAATGCTTTACAAAGCAGTATTGCTGCCCGCAGGTCCCACCTCCAGCCCTAAGGCGGTTTTTCCCTATCTCAGTAGATGGAGCATACAATCGGGTTTTATACCGAGACATTCCATTGCCGAGGGACAGGCAGGAGACAGATGCCTTCCTCTTGTCTCAACTGCAAGAGGCATTCCTTCCTCTTTTACTAATCCTCCTCAGCACAGACCCTTTACGGGTGTCGGGCTGGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCGGCCTTCCGCAGTTTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACTCTGAGTTGACACAGCACACATTTCAGAGAGCACGGGGTTGGGGGTAAGGTTATAGATTAACAGAATCTCAAGGCAGAAGAATTTTTCTTAGCACATAACAAAATGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTGCTTTTCCCCAC	20	PASS	ClusterIDs=HG2_PB_HySA_1458:HG2_PB_SVrefine2PB10Xhap12_634:HG4_PB_HySA_1110:HG2_PB_pbsv_760:HG4_PB_pbsv_770:HG2_PB_SVrefine2Falcon1plusDovetail_516:HG4_PB_assemblyticsfalcon_1052:HG3_PB_assemblyticsfalcon_1059:HG3_PB_pbsv_777:HG2_PB_SVrefine2PBcRplusDovetail_509:HG2_Ill_breakscan11_3022:HG4_PB_SVrefine2Falcon1Dovetail_487:HG4_PB_SVrefine2PBcRDovetail_421:HG4_Ill_MetaSV_215:HG4_Ill_GATKHCSBGrefine_507:HG3_Ill_MetaSV_191:HG2_Ill_MetaSV_208:HG3_Ill_GATKHCSBGrefine_476:HG3_PB_SVrefine2Falcon1Dovetail_446:HG4_PB_HySA_1109:HG3_PB_HySA_1136;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_MetaSV_208:HG3_Ill_MetaSV_191:HG4_Ill_GATKHCSBGrefine_507:HG4_Ill_MetaSV_215:HG4_PB_SVrefine2PBcRDovetail_421;NumExactMatchSVs=5;ClusterMaxShiftDist=0.199676;ClusterMaxSizeDiff=0.199676;ClusterMaxEditDist=0.247167;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=973;DistBack=105760;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=1:111802591-111802597;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=255.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:39:./.:31:11:14:26:1|0:0:15:31:0:0/1:31:22:0/1:40:156:.:1043:.
chr1	111896187	HG2_PB_pbsv_762	C	CCCTCTCCCGTCTCCCTCTCCCTCTCCTCTTTTTATTTACCGTCTCCTCTCCCTCTCCCCTCTCCCGTCTCCCTCTCCTTCTCCTTTCCACGGGTCCCTCTAAAGCCGCAAAGCTGGACTGTACTGCTGCCATCTGGCTCGCTGCAGCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCGGAGTTGCCTGCCGATTGCAGGGCGCGCGCCGCCATGCTGGATGGTTTTCGTGTTTTTTGGTGGGGACGCGGAGTTTCGCTGTGTTGCCGGGGACTGGTCTCCAGCTCCCAGCCGCGAGTGATCGCCAGCCTCGGCCTTCCGAGGGTTGCCGGGATTGCAGACCCGGAGTCTCATTCACTCAGTGCTCAATGGTGCCCAGGCTGGGAGTGCAGTGGCGTGATCTCGGCACGCTATGCCTCCACCTCCAGCCGCCTGCTTGGCCCCGCAAAAGTGCGGAGATGCAGCCTCTGCCGGCCGCCCACCCGTCTGGGAAGTGAGGAGTGTCTCTGCCGTGGCTGCCCATCGTCTGTGATTGTGAGGAGCCCCTCTGCTCTGGCTGCCCAGTCTGGAAAGTTGAGAGCGTCTCTGCCCGGGCCGCCATTCCCACTGGAAGCTGAGGAGCGCCTCCTCCGCCGCCAATTCCCAGCTAGGAAGTGAGGAGCGTCTCTGCCCGGGCAGCCCCATCGTCTTTTTTGTTTGTTTATGAGATGTGGGGAGCAGCCTCTGCCCCGCCGCCCCCGTTCTGGGAGGTGAGGAGCGGTTCTCTGCCCGCCCGCCCCGTCTGAGAAGTGAGGAGACCTCCGCCTGGCGCAAACCGCCCCGTCTGAGAAGTGAGGAGCCCTGCCGCCTGGCTGCCACCCCGTCTCTGGGAAGTTGAGGAGCGTCTCGCCCGGCAGCCACCCCGGCCCGCGGAGGGAGTGGGGGTCAGCCCCTCCGCCCGGCCAGCCGCCCCGTCGGGAGGAGGTGCGGGGGGTCAGCCCCCGCCCGGCAGCCGCCCTGCGGGAGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGGCTCCCCCAGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCAGCCAGCCGCCCGTTTCCGGGAGGGAGGGTGGGGCGGCTCGCCCCCGCCCGGCCAAGCCGCCCCGTCAGGGAGTGAGGGCGCCTCTGCCTGGCGCCCCTACTGGAAGTGAAAGGAGCCCCTTCTGCCCGCCAGCCGCCCCGTCCGGGAGGGAGGTCTATGGGGGCTCAAGCCCCCCGCCGGGCCAGCCGCTCCCGTCCGGCGAGGGAGGTGGGGGGGGTCAGCGGCCCCCTCCCGGCCAGCCGCTCCGGTCCTGGGGAGGGAGGTGGGGTGGTCAGCCCCCCGCCTGGCCCAGGCCACCCGCTTCCGGGAGCTAGGGGCGCCTCTGTCCGGGGCCGCCCCCTACTGCGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTTCTGGGAGGTGTACCAAACAAAGCTCATGAGAATGGGCCGTGATGACGAATGGCTCGTTTTCTTGGAATAGAAAAGGGGCAAGCGTGGGCCGAAAAGATTGAAGGAAATCGGATGGTTGCCCGTGTCTGTGTAAAAGAAGTAGACATGGGGAGACTTTTCATTTTGTTCTTACTAAGAAAAGAATTCTTCTGCCTTGGGATCCTGTTGATCTTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATTGTGCTGGTGTCCACTCAGGGTTAAATGGATTTAGGGCGGTGCAAGATGTGCTTTTGTTTAAAACAGATGCCTTTGAAGCAGCATGCTCGTTAGAGTCATCACCACTCCCTAATCTCAAGACCCAGGGACACAAACACTCTGCCTAGGAAACCAGAGACCTTGTTCACTTGTTTGTCTTGCTGACCTTCCCTCACTATTGTCCTATGACCCTCGCCAAAATCCCCCTCTGTGGAAACACCCGAAAGAATGATCAATAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGGCTAGGAAAAACCCAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAAAAA	10	PASS	ClusterIDs=HG4_PB_HySA_1112:HG3_PB_pbsv_779:HG2_PB_pbsv_762:HG2_PB_PB10Xdip_93:HG4_PB_pbsv_772:HG2_PB_SVrefine2Falcon1plusDovetail_517:HG2_PB_SVrefine2PBcRplusDovetail_510:HG3_PB_SVrefine2PBcRDovetail_442:HG2_PB_SVrefine2PB10Xhap12_635:HG3_PB_SVrefine2Falcon1Dovetail_447:HG4_PB_SVrefine2Falcon1Dovetail_488:HG4_PB_SVrefine2PBcRDovetail_422:HG3_PB_HySA_1138;NumClusterSVs=13;ExactMatchIDs=HG2_PB_pbsv_762;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0852143;ClusterMaxSizeDiff=0.0847071;ClusterMaxEditDist=0.213534;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=2054;DistBack=37635;DistForward=1628;DistMin=1628;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:111896188-111896187;PctSeqSimilarity=0.9468;PctSizeSimilarity=0.9606;PctRecOverlap=0.9601;SizeDiff=81;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=95;MatchId=256.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:44:0|1:32:0:0:37:./.:0:4:31:0:0/1:22:6:0/1:66:45:.:1966:.
chr1	112123675	HG3_Ill_GATKHCSBGrefine_481	A	AGGGTTTTGCTATTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_1141:HG2_PB_pbsv_768:HG3_PB_pbsv_784:HG4_PB_assemblyticsfalcon_1061:HG2_Ill_breakscan11_3023:HG2_PB_PB10Xdip_97:HG2_PB_SVrefine2PB10Xhap12_638:HG4_PB_SVrefine2Falcon1Dovetail_492:HG3_Ill_GATKHCSBGrefine_481:HG2_PB_SVrefine2Falcon1plusDovetail_520:HG2_PB_SVrefine2PBcRplusDovetail_513:HG2_PB_SVrefine2PB10Xhap12_637;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_520:HG3_Ill_GATKHCSBGrefine_481:HG4_PB_SVrefine2Falcon1Dovetail_492;NumExactMatchSVs=3;ClusterMaxShiftDist=0.203612;ClusterMaxSizeDiff=0.200328;ClusterMaxEditDist=0.236842;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=320;DistBack=25690;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=1:112123676-112123691;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:38:1|0:9:29:25:7:./.:19:0:0:3:0/1:33:18:0/1:6:28:.:.:.
chr1	112736007	HG2_PB_pbsv_770	A	AACCGGCGGGTGCGGCGGTGGCTCACGCACTGGTATCCCCGCACTTTGGGAGGCCGAGGCGGGCGATCACGAGGTCAAGAGATCGAGAACCAATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATAGCCGGCGTAGTGGCGGCGCCTGTTTAGTCCTCAGTCTACTATTTGGAGGCTGAGGTCAGGAGAATGCGCGTGACCCGGAGGGAGCTTGCAGTGAGCCGAGAATCCCGCCACTGCACTCCAGTCTGGGCGACAGAGCGAGACTGCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAGTAATT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_452:HG3_PB_pbsv_786:HG2_PB_pbsv_770:HG4_PB_assemblyticsfalcon_1067:HG4_PB_SVrefine2Falcon1Dovetail_494:HG3_PB_assemblyticsfalcon_1073:HG2_Ill_breakscan11_3024:HG2_PB_HySA_1469;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_770;NumExactMatchSVs=1;ClusterMaxShiftDist=0.130952;ClusterMaxSizeDiff=0.130952;ClusterMaxEditDist=0.174962;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=342;DistBack=10;DistForward=2954;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=1:112735996-112736009;PctSeqSimilarity=0.942;PctSizeSimilarity=0.9854;PctRecOverlap=0.9534;SizeDiff=5;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=96;MatchId=259.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:27:0|1:44:1:2:31:./.:20:0:5:3:0/1:22:8:0/1:8:15:.:.:.
chr1	112991994	HG2_Ill_GATKHCSBGrefine_478	G	GCCAGACACGTTATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCAGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_523:HG3_PB_assemblyticsfalcon_1075:HG4_PB_pbsv_778:HG4_PB_assemblyticsfalcon_1069:HG2_PB_pbsv_772:HG3_PB_SVrefine2Falcon1Dovetail_454:HG2_10X_SVrefine210Xhap12_601:HG2_Ill_MetaSV_213:HG2_Ill_GATKHCSBGrefine_478:HG4_Ill_MetaSV_220:HG4_Ill_GATKHCSBGrefine_512:HG4_PB_SVrefine2Falcon1Dovetail_496:HG4_PB_HySA_1124:HG2_Ill_breakscan11_3025;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_478:HG2_Ill_MetaSV_213;NumExactMatchSVs=2;ClusterMaxShiftDist=0.127726;ClusterMaxSizeDiff=0.124611;ClusterMaxEditDist=0.17134;PBcalls=8;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=317;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:112991995-112992009;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:22:0|1:29:1:0:22:0|1:22:0:1:11:0/1:33:13:./.:5:43:.:.:.
chr1	113542105	HG3_PB_SVrefine2Falcon1Dovetail_456	A	ACCTGTAATCCCAGGACTTTGGGAGGCTGAGGTGGGCAGATCACCTGAGGTTGGGAGTTCGAGACTAACCCAGGTAACACGGTGAAACCCCGTCTCTACTAAAAGTTCAAAATTAGCTGGGCATGGTGGTGCATGCCTGTTATCCCAGCTACTCGGGAGCCTGAGGCAGAAGAATCACTTGAACCTGGAGGCAGAGGTTGCGGTGAGCCAAGATCGCGCCATTGCACTCCAGCCTGGGCAACAACAGCAAAACTCCGTCTCAAAAAAAAAAAAAAAAGTTTAGGAAGACAGAATGTCTCAGAGGCAAATGCTGTTGGTGTTTATCCAAGTGTTTGTAGGTAAGAGGTTTCACTAGCCTGTTCCATTCTGGAAGTGGCTGCTTTGGAGTTGAATGGGTTTGAATCTATCATGGCCTGTAAATATTTATTAAATAGGCCAGGCACGGTGGCTCATGCCTGTAATCCCAGCATTCTGGAAGCCAAAGTGGGCAGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATAGTGAAACCCCATCTCTATCAAAAGAAAAAAAAACAAAAAATTAGCTGGGTGTGGTGGTGTGCACCTGTAGTCCCATCTATTTGGGAGGCTGAGGCAGGAGAATTGCTCAAACCCTGGAGGTGGAGGCTACAGTGAGCTGAGATTGCACCACTGCACTCTAGCCTGGGTGACACAGTGAGACCCTGTCTCAAAAAAAAAAAAGTTTATTAAATAAAACAGACGCCCTTGTTTACTCTGTAAGCAACCTACTCTTACCATCTGACTTCCCAAGTGCTGCTCACAGGACATGAATGTTTTGACCCTTGGCCATTATATTTTTCTTTTTCTATTCAAAATTTTATGAATAAACTGGTATTCTGGTTTTGAATACCAGCCTCTGGAAGCTTGAGTCTGCTTTGGGAGATAAATCCGTAATCTATGTGTTAGCTGATTGGATTTCTAAGCCTATATGGCTGTGGACCAGAACCTCACCCTGGTGAATCACCAAGGTAAGACTATGCCACAGAGGAACTTTTGGGGTCCACAAAAACTCCCTGACTGGCTGATTGTCTGTATCCTTCCTACTGAGACTTCTAAAGTTATCAGGCCTAGTGAAGATTACATCTGTGTTCGAGGAATAGCAGGATAAAATTATGTTCGGGATTTTGGTTTGGAGTTAGAGAGACTTAGTGTACATCCTTCCATTTTTACCTGAAACAAATTGTCCAATATTTCTGTGCCTTAATCTTCTCATCTGTAAATTGAAGATAACAAGAATGTCTACTTGTTAGAATCATTAGAGAAAAAATGAAACAGCATGTTAAGTACTTCATGTAGTGCCTAACATAAATACATGCTCAATAACCACTAATTTCTCCATGAGTAGAGAAACTCAAACTGTTTTTTCTTCTTCTCTTACACAACAACCAGCACAGAAGAGTTCTGTGACCAATTTGTGGGGGGTTTTCCCCACAAACCCAGCAGGCAAGCGATTCTGCAACAGACACCAGCTGAATGTGGATGTCCTGTAATTTAATTCAATTCTGACACTACCTGGAGATAGCCTCAGATACCACAAGTTGAGGACTGCCTTTCAGATTTAAACCTCAGTTCCTAAGACTGCCCCCGCTTCTGAGGCCAATTGCAAGTTACAGGTTGTTTTACCTCTGCTTCTGACTGATCAGCTATAAATCAGAGACTCCATCACCCCTCCTTGAATTCGATTAATTTACTAGAACAGCTCACAGAACTCAGGGAAACATTTACTTATGCTTACTGGTTTATTATAAAGGATATTATAGTCTGGGCACGGTGGCTGAAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_456:HG2_PB_pbsv_774:HG4_PB_pbsv_780:HG3_PB_pbsv_790:HG3_PB_HySA_1148:HG3_PB_HySA_1147:HG3_PB_SVrefine2PBcRDovetail_448:HG4_PB_SVrefine2PBcRDovetail_427:HG2_PB_SVrefine2Falcon1plusDovetail_525:HG2_PB_SVrefine2PBcRplusDovetail_517:HG3_Ill_SVrefine2DISCOVARDovetail_481:HG4_PB_SVrefine2Falcon1Dovetail_498:HG2_10X_SVrefine210Xhap12_602;NumClusterSVs=13;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_456;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0374833;ClusterMaxSizeDiff=0.0369478;ClusterMaxEditDist=0.165386;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=1832;DistBack=15492;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=275;REFWIDENED=1:113542106-113542380;PctSeqSimilarity=0.989;PctSizeSimilarity=0.9978;PctRecOverlap=0.9069;SizeDiff=-4;StartDistance=-169;EndDistance=-169;GTMatch=0;TruScore=96;MatchId=262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:9:33:./.:4:13:5:8:./.:0:1:14:0:0/1:19:9:0/1:51:129:.:1816:.
chr1	115201392	HG2_PB_SVrefine2Falcon1plusDovetail_533	A	ACAGTTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG3_PB_HySA_1162:HG4_PB_assemblyticsfalcon_1085:HG2_PB_assemblyticsfalcon_1131:HG3_PB_assemblyticsfalcon_1092:HG2_Ill_breakscan11_3027:HG3_PB_pbsv_800:HG4_PB_SVrefine2Falcon1Dovetail_505:HG3_Ill_MetaSV_200:HG3_Ill_GATKHCSBGrefine_491:HG2_PB_SVrefine2Falcon1plusDovetail_533:HG2_Ill_MetaSV_218:HG2_Ill_GATKHCSBGrefine_487:HG3_PB_SVrefine2Falcon1Dovetail_464;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_487:HG2_Ill_MetaSV_218:HG2_PB_SVrefine2Falcon1plusDovetail_533:HG3_Ill_GATKHCSBGrefine_491:HG3_Ill_MetaSV_200;NumExactMatchSVs=5;ClusterMaxShiftDist=0.14658;ClusterMaxSizeDiff=0.143322;ClusterMaxEditDist=0.2208;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=304;DistBack=20008;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=1:115201393-115201401;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:17:./.:18:7:10:3:./.:25:0:0:3:0/1:29:14:0/1:4:28:.:.:.
chr1	115690182	HG2_Ill_GATKHC_1160	T	TATATATATATATACATATATATATATATACGTATATATATATATATATACATATATATATATATATAC	20	PASS	ClusterIDs=HG4_PB_HySA_1144:HG4_Ill_GATKHC_1146:HG2_Ill_GATKHC_1160:HG3_Ill_GATKHC_1218:HG3_Ill_GATKHCSBGrefine_492:HG2_PB_pbsv_785:HG2_Ill_manta_202:HG3_Ill_manta_154:HG2_PB_HySA_1488;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHC_1160:HG4_Ill_GATKHC_1146;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0992908;ClusterMaxSizeDiff=0.0992908;ClusterMaxEditDist=0.20979;PBcalls=3;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=-1;DistForward=65346;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=1:115690145-115690200;PctSeqSimilarity=0.9857;PctSizeSimilarity=0.9714;PctRecOverlap=0.9718;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:19:./.:25:7:5:9:./.:3:11:14:3:0/1:25:17:./.:.:.:.:.:.
chr1	116304105	HG2_PB_pbsv_788	G	GGGGAAGGGCAAGGGAAGGGGAAGGGGGTAAGGGGAGGAGGGGCGAGGGGGAGGGGAGGGGAGGGGTAGAGTGGGAGGGGGAGGGGGAGAGGAAGGAGAGAGGAAGAGGAAGAAGGAGAAGAGAAGGAGAGAAGAAGAAGAAGAAGCAAGAAGAAGAAGAAGAAAAGAAGAAGAAGGAGGAAGGTAGAAGAGAAGGAGAAGGGCGAGAAGAGGAGAAAGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_507:HG3_PB_HySA_1169:HG4_PB_HySA_1150:HG2_PB_HySA_1492:HG2_PB_SVrefine2PB10Xhap12_648:HG2_PB_pbsv_788:HG3_PB_SVrefine2PBcRDovetail_455:HG4_PB_pbsv_788:HG2_PB_SVrefine2Falcon1plusDovetail_535:HG2_PB_SVrefine2PB10Xhap12_647:HG3_PB_pbsv_804:HG3_PB_SVrefine2Falcon1Dovetail_467:HG2_PB_SVrefine2PBcRplusDovetail_523:HG4_PB_SVrefine2PBcRDovetail_433;NumClusterSVs=14;ExactMatchIDs=HG2_PB_pbsv_788;NumExactMatchSVs=1;ClusterMaxShiftDist=0.16408;ClusterMaxSizeDiff=0.16408;ClusterMaxEditDist=0.296984;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=219;DistBack=19;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=1:116304106-116304114;PctSeqSimilarity=0.9024;PctSizeSimilarity=0.9954;PctRecOverlap=0.9498;SizeDiff=1;StartDistance=11;EndDistance=11;GTMatch=1;TruScore=94;MatchId=265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:39:1/1:1:28:4:12:./.:6:0:8:2:0/1:13:3:./.:.:.:.:.:.
chr1	117802090	HG4_Ill_GATKHC_1163	G	GAAGTCTCTAGGAAGTTACAAACTTTCCTACATCTTCTTGTCTTCTGAGCTCTCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3028:HG2_PB_pbsv_793:HG4_PB_HySA_1166:HG2_PB_HySA_1507:HG4_PB_SVrefine2PBcRDovetail_438:HG4_Ill_svaba_914:HG4_Ill_manta_181:HG4_Ill_Krunchall_1018:HG4_Ill_GATKHC_1163:HG4_Ill_GATKHCSBGrefine_521:HG4_Ill_250bpfermikitraw_986:HG4_Ill_150bpfermikitraw_937:HG2_PB_SVrefine2Falcon1plusDovetail_539:HG2_Ill_svaba_910:HG2_Ill_manta_205:HG2_Ill_SpiralSDKrefine_697:HG2_Ill_Krunchall_982:HG2_Ill_GATKHC_1177:HG2_Ill_GATKHCSBGrefine_491:HG2_Ill_250bpfermikitraw_979:HG2_Ill_150bpfermikitraw_884:HG2_10X_SVrefine210Xhap12_617;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_617:HG2_Ill_150bpfermikitraw_884:HG2_Ill_250bpfermikitraw_979:HG2_Ill_GATKHCSBGrefine_491:HG2_Ill_GATKHC_1177:HG2_Ill_Krunchall_982:HG2_Ill_SpiralSDKrefine_697:HG2_Ill_manta_205:HG2_Ill_svaba_910:HG2_PB_SVrefine2Falcon1plusDovetail_539:HG4_Ill_150bpfermikitraw_937:HG4_Ill_250bpfermikitraw_986:HG4_Ill_GATKHCSBGrefine_521:HG4_Ill_GATKHC_1163:HG4_Ill_Krunchall_1018:HG4_Ill_manta_181:HG4_Ill_svaba_914;NumExactMatchSVs=17;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.185185;PBcalls=5;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=54;DistBack=32117;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=45;REFWIDENED=1:117802091-117802135;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:0|1:30:2:0:28:1|0:0:18:16:0:0/1:27:22:./.:.:.:.:.:.
chr1	118931730	HG2_PB_SVrefine2PB10Xhap12_660	A	TCACGTACCATATGTGTGCTTAGGAACTGGGTCTTACAGTGGTATTTTACAAATAAGGAATATTGCTTAATTTCTGTGGACTTATGTTTAATTCTATAAAATCCCTTTATTTAACATTTTTGAAACATTTAGGCTGTGAAAAGCCTTGTGAGTCATAGGTGTGGGAAATATAAAAATTAATTAGTTGAAATAAAGATAATAAAGAGATTATAATCTAGTGAGGGAAATAGATTTGCCAAACAATGCAAAGAAACAACATGGGGTGGGAAAAGGGAATAAAACTAAGTAATGAATTGCAGCATCTGGGGTTCCAACAGGAGCAAAGGCTGATGTTGAGGTATGGTGGGATCTCCTTTTTGATTCTGATTAGGAAGCACAGTGACCATTAATCCTACCCAACTCTAGTGAGACGTGGGCTATACAAAAAAGCCTCTTTTAACATGAAAGCATTGGAGTGGAATAGTGGTTTTACAAACTGGGCTCCATGGAATCTATAGGTATTTTGCTTTGCTGCTGCCACAAACTAGAGAGGCTTTGCTTTTTTTTTTTTTATTTCTTGTTTCAAACTGATTTCCATCAGAAGCTTTAATTTGAATAAAAGTTTTTTATAAGGCTAACAAAATAAGGAAAGGAAAGGAAAGAAGAAAAGGAGGAAGGAAGGAAAGAGGGGAGGGAGAGAAAGAAAATAAAAAAGAACAAAAACCCTCTGGACTAGGTCTCTAATATCCTGTGACTCTGGTTTAAGTAGAATTAGAGAAAAGTTATTATAACTGTGACTCCATCCATGGAATATCTGAATTCTAATAAGAAAAAAATTACTGGAGAAAAATTTATAATAGAATTTTAAATATCAAGATAGAGAAGATGGGGGGAAAACAGAAGTTGTCTATAGCTTCAAATCCCCTCATCAAAACATCCAGTCCTGTTGCCTATGTTTATTTAATCCTGGCACCAATTTTGTGTACTTAGGTTTTAATGTTATTAAGATCTATTGATATGATTAGCTCAGAATAGAACTTTTGTTTTTCTCTTTTCTTTAGAGTCTTGCTCTGTCGCCTGGGCTGGAGTGCAGTGATGTGATCTAGACTCACTGCAATCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCCCCTGAATAGCTAGGATTACAAGCGTGTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTACAGAGGGAGGGTTTGCCACGTTGGCTAGGCTGGTCTCAAACTCCTAGCCTCAAATGATCCACCTACCTTGGCCTCCCAAAGTGCTGGAATTACGGGTGTGAGCCACTGCATCCAGCCAGAATAGAGCTTTGTCTGTTAAATTTTTTAAGTTTCTTAAGTTACCCACTCTGTTTAATGCTTTCAGAAGTTTTGGAAAACAAAAAACACAAATCACTGCCCATTATCACATAAGAACAACCCAGTTTCTGTATCTGGGAATCCTTTAACCTAAGACTCATGGGAAGGAAGAGCGTTCCCAAGATGGCTGCCCATAGCCTTTGGCTTTTACTACTGTGGGCCCCAGTTGTGCTCTAAGCAAGGTGCCCTAGAGCATTCCTCCATCAGAAACTGTAACTGGGAAACTGTATATGTGTGCAGCTCCAGCTTTTTAAGGGCTATCAGGAGATGTGAATGGGGAGCTTTCCCAGATATATACAGTGTATTAATAATTAATTAGTGGGGACAAGACCTCTTGGGGTTTATGAGTGTGAACCCTTACTCCCACAGTGCAAATAGCATTCCAAGTACAGCGACTGCAGGCTGGGTGCTGAATACCAGCTAGTAAGTTCAGGCCTGACCATTTTAGACTGTACCTAGGCTGGCCACCATGCTAAAAACAAACATAGACCAGGTACAGATGCAAGCACAGCCTTCCCGTTGCTCCAACAGGTATTCTAGGCCAAGGAAGGATTTGCCTCAGAGACATTTGTTCCCCTTATTCAAGGGAAACATTCACTCTCTGGCTCCAAGTTCCCTAGAGTCTGTTTAGCCCCATTTTCTTTTACTACATGCCTTTTCTGGGGGAGGATGTATACTTTTTAGCATCGGCTACATTCTGAACCCAGGACAACCAATAGACATTTTCATCTGTATGCCCTACAAGTATGCAGATTCAAATAAATTTAGTATCTGCACCCTCTGCAACCCCAACTGCTTCTCACCCTCATTTAGGGACCAAACATTAGTCTTTAAAGGTAGAAACATCTTTTCCCCTTCCTCAGCCTGTCTATTTTGGCACTTAAGACCTGTGGAATCTACCTCAGAAATGTCTCTGAAATCTCCATCTTTTACTTTATTCATTAATTTGTATTGAGCACTAAAGGACTTGGATGAGATCCAGCCCATTTTTATAATAATCAAGTGAGTACTGGAGTGTGAGACAAATAAATAACCATTAATCCAATGTGAGAGATGGTTTAATAGAGCTTTGCACAGGGTGGCCTGGGAGTGGAAAGGAGGGGCCATCTGTTTGTTTTTCTGATAGCAATATTCAAAAAGTATTTGCTGTGGATGCTCAAAAAATATTTGTAGAAGCAAACTAAACTGAAGTGGTGATGCATATTCTCAGTTTTTGAGAATGAATTTGTAGGTGGACAACTAAAGGGGTGCCATGTAGGCAAAAGAAACTGTATGTACAAACCATAAAGAAGC	20	PASS	ClusterIDs=HG4_PB_HySA_1179:HG4_PB_pbsv_802:HG2_PB_pbsv_800:HG3_PB_pbsv_815:HG2_PB_SVrefine2Falcon1plusDovetail_547:HG3_PB_SVrefine2Falcon1Dovetail_475:HG3_PB_SVrefine2PBcRDovetail_458:HG3_Ill_SVrefine2DISCOVARDovetail_498:HG2_PB_SVrefine2PB10Xhap12_660:HG2_10X_SVrefine210Xhap12_621:HG4_Ill_SVrefine2DISCOVARDovetail_568:HG2_Ill_SVrefine2DISCOVARplusDovetail_632:HG4_PB_SVrefine2Falcon1Dovetail_516:HG2_PB_PB10Xdip_138:HG2_Ill_breakscan11_3029:HG4_PB_SVrefine2PBcRDovetail_442:HG2_PB_SVrefine2PBcRplusDovetail_531:HG2_PB_SVrefine2Falcon1plusDovetail_546;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_660:HG3_Ill_SVrefine2DISCOVARDovetail_498;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0437822;ClusterMaxSizeDiff=0.0434143;ClusterMaxEditDist=0.15443;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=2668;DistBack=1575;DistForward=12241;DistMin=1575;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:118931731-118931729;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9993;PctRecOverlap=0.9993;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=268.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:77:1/1:0:26:0:18:1/1:0:14:0:19:1/1:1:43:1/1:8:241:.:2711:.
chr1	119553353	HG4_PB_pbsv_803	A	AAAAAATTTCCCCATCGATCTAATTAAACTAAAGAGCTATTCTGCACAGCAAAAGAAAACTACCATCAGACGTGAACAGGCAACCTACAACATGGGAGAAAAATTTTTGCAACCTAACTCATCTGACAAAGGGCTCATATCCAGAATTCTACAATGAACTCAAACAAATTTACAGAAAAAAAAACAAACAACCCCATCAAAAAGTGGTGCGAAGGACATGAACAGCACTTCGTCAAAAGAAGACATTTAATGGCCAGCCCAAAAAAATGCGAAGAAGCTCATCATCACTGGCCATCAGAGAAATGCAAAATTCAAAAACCACTATGAGATATCATCTCACACCAGTTAGCAATGGCAATCATTAAAAAGTTTCAAGGAAACAACAGGTGCTGGAGAGGATGCGGAGGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCCATTGTGGAAGTTCAGTGTGGGCGATTCGCTCAAGGGATCTAGAACTAGACAATACCATTTGACCCAGCCATTCCCATTATCTGTATATACCCAAATGACAGTATAAATCATTGCTGCTATAAGACACATGCACACGTATGTTTATGCGGCAACTATTCACAATAGCAAGACTTGGAACCAACCCAAATGCTCCAACAATTATAGGACTGGATTAAGAAAATGTTGCGCACATAATACACCCATGGATCTATGCAGCCATATAAAAAAATGATGAGTTCAATTATCCTTTGTAGGAGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTTCTCACTCATAGCGTGGGGGAATTGAACAATTGAGATCACATGGACACAGGAAGGGAATATTCACACTTCTGGGGGACTGTGGTGGGGTCAGGGGGAGGGGGGAGGGATTCACATTGGGAGATATACCTAATGCTAGATGGACACATTAGTGGGTTTGCAGGCGCCCAGCATGGCACATTATACATATGTTAAGCTAACCTTGCACAATGTGCACATTACCTAAACTGTAGAGTATAATAAAAAAAAAATAAATAAATAAATAAAGTGTTTAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_661:HG2_PB_pbsv_803:HG2_PB_PB10Xdip_139:HG4_PB_pbsv_803:HG4_Ill_MetaSV_229:HG2_Ill_MetaSV_224:HG4_PB_HySA_1182:HG2_PB_HySA_1527:HG2_PB_SVrefine2PBcRplusDovetail_532:HG2_PB_SVrefine2Falcon1plusDovetail_548;NumClusterSVs=10;ExactMatchIDs=HG4_PB_pbsv_803;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0588502;ClusterMaxSizeDiff=0.0481162;ClusterMaxEditDist=0.158363;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=1127;DistBack=-11;DistForward=12;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:119553354-119553366;PctSeqSimilarity=0.9566;PctSizeSimilarity=0.9565;PctRecOverlap=0.9574;SizeDiff=49;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=95;MatchId=269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:37:0|1:27:0:1:33:./.:1:12:32:0:0/1:27:11:0/1:46:28:.:.:.
chr1	146960345	HG3_PB_SVrefine2PBcRDovetail_490	C	CTGTAAAATGGGGCTATCAGTGCCTTTCTCCGTCGGGTTGTTGGAGGATGTGAGGATTAAACATCTTAGTACAGGTAACATGCCTGGTACATATCACTTAATGAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_636:HG2_PB_pbsv_836:HG2_PB_PB10Xdip_458:HG4_PB_pbsv_833:HG2_PB_HySA_1549:HG3_PB_pbsv_844:HG3_PB_HySA_1232:HG4_PB_SVrefine2Falcon1Dovetail_528:HG4_Ill_SVrefine2DISCOVARDovetail_577:HG4_Ill_GATKHCSBGrefine_551:HG3_PB_SVrefine2PBcRDovetail_490:HG3_PB_SVrefine2Falcon1Dovetail_489:HG3_Ill_SVrefine2DISCOVARDovetail_514:HG3_Ill_GATKHCSBGrefine_520:HG2_PB_SVrefine2PBcRplusDovetail_569:HG2_PB_SVrefine2PB10Xhap12_686:HG2_Ill_SVrefine2DISCOVARplusDovetail_644:HG2_Ill_GATKHCSBGrefine_524;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_636:HG4_PB_SVrefine2Falcon1Dovetail_528:HG4_Ill_SVrefine2DISCOVARDovetail_577:HG4_Ill_GATKHCSBGrefine_551:HG3_PB_SVrefine2PBcRDovetail_490:HG3_PB_SVrefine2Falcon1Dovetail_489:HG3_Ill_SVrefine2DISCOVARDovetail_514:HG3_Ill_GATKHCSBGrefine_520:HG2_PB_SVrefine2PBcRplusDovetail_569:HG2_PB_SVrefine2PB10Xhap12_686:HG2_Ill_SVrefine2DISCOVARplusDovetail_644:HG2_Ill_GATKHCSBGrefine_524;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0930233;ClusterMaxSizeDiff=0.0829493;ClusterMaxEditDist=0.258929;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=104;DistBack=21997;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=107;REFWIDENED=1:146960346-146960452;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=270.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:0:10:1:16:./.:0:8:1:12:1/1:1:37:./.:.:.:.:.:.
chr1	152853455	HG3_PB_SVrefine2PBcRDovetail_507	C	CCCTCCTTCCCAGAGAAAGTCTCAGGATTTCTCTGTGGGAAGGAGGCCCCTGGCATATGGCCAAGCCTTCTCAGGCATATGCCAGGGG	20	PASS	ClusterIDs=HG3_PB_HySA_1279:HG4_PB_pbsv_864:HG3_PB_assemblyticsfalcon_1183:HG2_PB_pbsv_860:HG2_Ill_breakscan11_3033:HG3_PB_pbsv_873:HG2_PB_PB10Xdip_615:HG4_PB_SVrefine2PBcRDovetail_486:HG4_PB_SVrefine2Falcon1Dovetail_539:HG4_Ill_svaba_992:HG4_Ill_manta_195:HG4_Ill_SVrefine2DISCOVARDovetail_602:HG4_Ill_Krunchall_1132:HG4_Ill_GATKHCSBGrefine_576:HG4_Ill_250bpfermikitraw_1070:HG4_Ill_150bpfermikitraw_1018:HG3_PB_SVrefine2PBcRDovetail_507:HG3_Ill_svaba_1023:HG3_Ill_manta_171:HG3_Ill_Spiral_856:HG3_Ill_Krunchall_1124:HG3_Ill_GATKHCSBGrefine_539:HG3_Ill_250bpfermikitraw_1069:HG3_Ill_150bpfermikitraw_1008:HG2_PB_SVrefine2PBcRplusDovetail_589:HG2_PB_SVrefine2PB10Xhap12_707:HG2_PB_SVrefine2Falcon2Bionano_148:HG2_PB_SVrefine2Falcon1plusDovetail_588:HG2_Ill_svaba_998:HG2_Ill_manta_226:HG2_Ill_SpiralSDKrefine_795:HG2_Ill_Krunchall_1090:HG2_Ill_GATKHC_1305:HG2_Ill_GATKHCSBGrefine_544:HG2_Ill_250bpfermikitraw_1079:HG2_Ill_150bpfermikitraw_970:HG2_10X_SVrefine210Xhap12_653:HG2_PB_HySA_1606;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_653:HG2_Ill_150bpfermikitraw_970:HG2_Ill_250bpfermikitraw_1079:HG2_Ill_GATKHCSBGrefine_544:HG2_Ill_GATKHC_1305:HG2_Ill_Krunchall_1090:HG2_Ill_SpiralSDKrefine_795:HG2_Ill_manta_226:HG2_Ill_svaba_998:HG2_PB_SVrefine2Falcon1plusDovetail_588:HG2_PB_SVrefine2Falcon2Bionano_148:HG2_PB_SVrefine2PB10Xhap12_707:HG2_PB_SVrefine2PBcRplusDovetail_589:HG3_Ill_150bpfermikitraw_1008:HG3_Ill_250bpfermikitraw_1069:HG3_Ill_GATKHCSBGrefine_539:HG3_Ill_Krunchall_1124:HG3_Ill_Spiral_856:HG3_Ill_manta_171:HG3_Ill_svaba_1023:HG3_PB_SVrefine2PBcRDovetail_507:HG4_Ill_150bpfermikitraw_1018:HG4_Ill_250bpfermikitraw_1070:HG4_Ill_GATKHCSBGrefine_576:HG4_Ill_Krunchall_1132:HG4_Ill_SVrefine2DISCOVARDovetail_602:HG4_Ill_manta_195:HG4_Ill_svaba_992:HG4_PB_SVrefine2Falcon1Dovetail_539:HG4_PB_SVrefine2PBcRDovetail_486;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0681818;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.272727;PBcalls=14;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=87;DistBack=145675;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:152853456-152853470;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=273.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:4:60:./.:0:1:0:0:./.:11:21:2:9:0/1:19:39:./.:.:.:.:.:.
chr1	153229127	HG2_PB_SVrefine2Falcon2Bionano_151	G	GACTATATATAGTCATATATGTATATAAAACTATATATAGTCATATATGTATATAAAACTATATATAGTCATATATGTATATAAAACTATAGTCACATATGTATATAAAACTATATATAGTCACATATGTATATAAAACTATATATAGTCACATATGTATATAAAACTATATATAGTCACATATGTATATAAAACTATATATAGTCACATATGTATATAAAACTATATATAGTCACATATGTATATAAAACTATATATAGTTACATATGTATATAAAACTAAATATAGTCATATATGTATATAAAACTATATATAGTTATATGTATATAAAACTATATATAGTTATATGTATATAAAACTATAGTCATATATGTATATAAAACTATATACAGTCATATATGTATATAAAACTATATACAGTCATATATGTATATAAAACTATATACAGTCATATATGTATATAAAACTATATACAGTCATATATGTATATAAAACTATATACAGTCATATATGTATATAAAACTATACAGTCATATATGTATATAAAACTATATATAGTCATATATGTATATAAAACTATATATAGTCATATATGTATATAAAACTATATATAGTCATATATGTATATAAAACTATATAGTCATATATGTATATAAAACTATATAGTCATATATGTATATAAAACTATATAGTTATATATGTATATAAAACTATAGTTATATATGTATATAAAACTATAGTTATATATGTATATAAACTATAGTTATATATGTATGTAAAACTATAGTTATATATGTATGTAAAACTATAGTTATGTATGTAAAACTATAGTTATATATGTATGTAAAACTATATACAGTTATGTATGTATGTAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_490:HG4_PB_HySA_1247:HG4_PB_pbsv_870:HG2_PB_SVrefine2PB10Xhap12_711:HG3_PB_HySA_1280:HG3_PB_pbsv_876:HG2_PB_SVrefine2PBcRplusDovetail_592:HG3_PB_pbsv_875:HG3_PB_SVrefine2PBcRDovetail_509:HG2_PB_SVrefine2Falcon1plusDovetail_591:HG4_PB_SVrefine2Falcon1Dovetail_543:HG2_PB_SVrefine2Falcon2Bionano_151:HG4_Ill_SVrefine2DISCOVARDovetail_605:HG3_PB_SVrefine2Falcon1Dovetail_507;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_151;NumExactMatchSVs=1;ClusterMaxShiftDist=0.244444;ClusterMaxSizeDiff=0.244444;ClusterMaxEditDist=0.33935;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=875;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=152;REFWIDENED=1:153229107-153229258;PctSeqSimilarity=0.9884;PctSizeSimilarity=0.9966;PctRecOverlap=0.8669;SizeDiff=-3;StartDistance=-115;EndDistance=-115;GTMatch=1;TruScore=95;MatchId=274.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:88:1/1:1:33:1:35:1/1:0:12:1:26:1/1:0:23:./.:8:101:.:851:.
chr1	154686433	HG2_PB_SVrefine2Falcon1plusDovetail_592	C	CATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCTGTGTGTGTGTGGTGTGTGTTCTGTGTGTGGCATGTGTGTGGATTTTGTGTGTGGTTTGTGTGGTGTGTTTTGTGTGTTGCGTGTGTGTGTTGTGTGTGGGGGCGTGTGTGTGGTGTGTGTTGGGGGCATGTGGTGTGTGTGTGGTTTGTGTGTGTGGTGTGTGGGGGGGCCATGTGTGTGTGGGGGTATGTGTGGTGTGTGGTTTGTGTGTGTGGGTATGGTGTTTGTGTGTGTTGTGTGTATGGGGTGTGTGTGTGTGTGTGTGTGTATGGGTGTGTTTGTAGTGTGCGTGGTGTGTGTCATATGTGTGATGTGTGTGTGTGGTGCGTGTAATGTGTGTGGTATGTGTGTGGCGTGTGTGGTATGTGTGGTTTGTGTGTGTGTGACGTGTTTGGTGTGTGGTTTGGGTGTGTGTGGGTGTGTGTGGTTTGTGTGGTGTGGGGGGCATGTGTGTGTGGTGTGTTTGGTGTGTGTATGGGGTGTGTGTGGTGTGTATGTGGTGTGTGTGTGGTGTGTGTGGTGAGTGTGTATTTGTGTTGTGTGTGGGGCCATGTGTGGTGTGTGTTTGGGGCATGTGGTGTGTGTGGTTTGTGTGTGTGGTGTGTGTGGGGGCATGTGGTGTGCATGTGGGTCATGTGGTGTGTGTGGGTTTGTGTGTGTGTGGTATGGTGTGTGTGTGCTGTGTGTGTTGTGTGTGGTGTGTAAGGGTGTGTTTGTGGTGTGTGGTTTGTGTGTCGGTGTGTGTGGTGTGTTTGGTGTGTGTTTGGTGTGTGTGGTGTGTAGGGGGCATGTGTGTTGTGTGTGTGATGTGTAGGGGGTGTGTGTGGTGCGTTTGGTGTGTGTGGGCGTGTAGTGTGTGTGGTATGTGTGTGGGGTTTGTGGTGTGTGTGGTTTGTGTGTGGGTGTATGTGGTTTGTGTGTGTGTGGTGTGTTTGGTGTGTGTGGTGTGTAGGGGGCATGTGTGTTGTGTGTGTGATGTGTAGGGGTGTGTGTGGTGTGTATGGTGTTTTGGTGTGTGGTTTGTGTGTGTGTGGTTTGTGTGGTTTGTGTGGTGTGTGTGCTGTGTGTGTGTGTCTGGTTTTGGGGTGTGTGTGTTGTGTGATGTGTATGTGTGTGGTGTGTGTGTTGTGTTTGTGATGTGTGTCATGTGTGGTGTGTGTGGTGCGTGTAATGTCTGTGGTGTGTATATGTGTGGTGTGTGGGGGTGTGTGGTGTGTGTGTGTAGTGTGTGTGTGATGTGTGATGTGTGGTGTGTGTCTGGTGTGTATGGTGTGTGTGAGGTGTGTGTGGTGTGTGTGTGTGGTTTGTGTGTGGTATGTATGGTGTGTGTGATGTGTGGTGTGTGTGTGGTGTGTGTGTGTGGTATGTGGTGTGCATGGTGTGTGTGGGTGTGTATGGTGTGTGTGATGTGTATGGTATGGTGTGTGTGGTGTGTGTGTGGTGTGTGGTGTGTATGGTGTGTGTGTGGTTTGTGTGAGGTGTGTGTGGGTGTGTGTGTGTGGTGTTTGTGTGTGGTGTGTATGGTGTGTGTATGGTTTGTGTGAGGTGTGTGTGGGGTGTGTGTGTGTGGTGTTTGTGTGTGGTGTGTGGGATGTGTGGTGTGTGGGGTGTGTGTGTGTGGGTTTGTGTGTGGTGTGTATGTTGTGTGTGATGTGTGGTGTGTGCGGGGTGTGTGTGTGTGGTGTTTGTGTGTGGTGTGTATGGTGTGTGTGATGTGGTGTGTGTGGGGTGTGTGTGTGGTGTTTGTGTGGTATGTGGTGTGCATGGTGTGTGTGGGGTGTGTGTGGTGTGGTGTGTATGGTGTGTGTGATGTGTGGTATGTGGTGTGTGGTGTGTCTGGTGTGTGTGTGGTGTGTGGTGTGTATGGTGTGTGTGTGGTTTGTGTGAGGTGTGTGTGGGGTGTGTGTGTGTGTGGTGTTTGTGTGTGGTGTATGGTGTGTGTATGGTTTGTGTGAGGTGTGTGTGGGGGGTGTGTGTGTGGTGTTTGTGTGTGGTGTGTGGTGTGTGTGTGTGTGGTGTTTGTGGTGTGTATGGTGTGTGTGATGTGTGGTGTGTGTGGGGTGTGTGTGTGTGGTGTTTGTGTGTGGTGTGT	10	PASS	ClusterIDs=HG2_PB_HySA_1617:HG3_PB_HySA_1287:HG2_PB_PB10Xdip_622:HG3_PB_SVrefine2Falcon1Dovetail_508:HG2_PB_SVrefine2Falcon2Bionano_152:HG2_PB_SVrefine2PBcRplusDovetail_593:HG3_PB_SVrefine2PBcRDovetail_510:HG2_PB_SVrefine2Falcon1plusDovetail_592:HG2_PB_SVrefine2PB10Xhap12_712:HG4_PB_SVrefine2Falcon1Dovetail_544;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_592;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0919963;ClusterMaxSizeDiff=0.0919963;ClusterMaxEditDist=0.105796;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2132;DistBack=2024;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=690;REFWIDENED=1:154686434-154687123;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9834;PctRecOverlap=0.9834;SizeDiff=-36;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:91:1/1:2:22:3:34:1/1:2:649:6:680:1/1:0:12:1/1:3:267:.:2289:.
chr1	154727964	HG4_Ill_150bpfermikitraw_1029	A	AAAGGAAGAAAGAAAGAAAGAAGAAAGGAAAGGAAGGAAAGGAAGGAAGGAAGG	10	PASS	ClusterIDs=HG2_Ill_svaba_1008:HG4_Ill_svaba_1005:HG3_Ill_GATKHC_1370:HG3_Ill_svaba_1035:HG2_Ill_svaba_1009:HG2_Ill_scalpel_777:HG2_Ill_Krunchall_1096:HG2_Ill_FB_741:HG4_Ill_GATKHC_1291:HG4_Ill_svaba_1004:HG4_Ill_scalpel_745:HG4_Ill_Krunchall_1143:HG4_Ill_250bpfermikitraw_1080:HG4_Ill_150bpfermikitraw_1029:HG3_Ill_svaba_1034;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_svaba_1008:HG4_Ill_svaba_1004:HG4_Ill_scalpel_745:HG4_Ill_Krunchall_1143:HG4_Ill_250bpfermikitraw_1080:HG4_Ill_150bpfermikitraw_1029:HG3_Ill_svaba_1034;NumExactMatchSVs=7;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.25;ClusterMaxEditDist=0.270833;PBcalls=0;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=7;NumTechs=1;NumTechsExact=1;SVLEN=53;DistBack=26854;DistForward=300;DistMin=300;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=134;REFWIDENED=1:154727939-154728072;PctSeqSimilarity=0.9225;PctSizeSimilarity=0.8302;PctRecOverlap=0.6415;SizeDiff=9;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=79;MatchId=276.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:./.:20:16:1:14:./.:2:24:14:4:0/1:8:7:./.:.:.:.:.:.
chr1	155670443	HG2_PB_SVrefine2Falcon2Bionano_155	G	GAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCAACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCAGCCAGCCGCGCCGTCTGGGAGGTGAGGGGTGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_547:HG3_PB_SVrefine2Falcon1Dovetail_511:HG2_PB_PB10Xdip_638:HG3_PB_pbsv_882:HG2_PB_pbsv_868:HG3_PB_SVrefine2PBcRDovetail_513:HG2_PB_SVrefine2PBcRplusDovetail_596:HG2_PB_SVrefine2PB10Xhap12_715:HG2_PB_SVrefine2Falcon2Bionano_155:HG2_PB_SVrefine2Falcon1plusDovetail_595:HG4_PB_SVrefine2PBcRDovetail_492;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_595:HG2_PB_SVrefine2Falcon2Bionano_155:HG2_PB_SVrefine2PB10Xhap12_715:HG2_PB_SVrefine2PBcRplusDovetail_596:HG3_PB_SVrefine2PBcRDovetail_513;NumExactMatchSVs=5;ClusterMaxShiftDist=0.191489;ClusterMaxSizeDiff=0.18845;ClusterMaxEditDist=0.285714;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=354;DistBack=-403;DistForward=-1;DistMin=-403;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=451;REFWIDENED=1:155670444-155670894;PctSeqSimilarity=0.9819;PctSizeSimilarity=0.9915;PctRecOverlap=0.2789;SizeDiff=3;StartDistance=-254;EndDistance=-254;GTMatch=0;TruScore=75;MatchId=277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:3:14:1:34:./.:0:0:0:0:1/1:1:11:./.:2:11:.:.:.
chr1	155974394	HG4_Ill_GATKHCSBGrefine_583	C	CCTCCTGCCTCAGCCTCCTGAGTAGAAGGGAGCATGATTTACCCAAGGTCATACAGCCAGTGAGTGGTGGAGTTGGGGCGGGACCCAGTACTCCTGCCTCTGGCATACGTTGCTTCCCCCACTCTTAGCTGCTCTCTCAAGGGACTAAGCCTTGGTAACTTCTCATCCTTTCACTGAATCGCTCCATTACTTCCAGCTTTGTAGAAATTCTTTTTTTTTTTTTTGAGATGGAGTTTCACTTTTTTATCCAGGCTGGAGTGCAACGGCATGATCTTGGCTCACTGCAACCTCCGCCCACCGGGTTCAAGTGATT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_513:HG4_Ill_Spiral_70:HG3_PB_pbsv_885:HG4_PB_pbsv_878:HG2_PB_pbsv_871:HG2_PB_HySA_1625:HG4_PB_HySA_1259:HG2_PB_PB10Xdip_640:HG4_Ill_manta_197:HG4_Ill_MetaSV_263:HG4_Ill_GATKHCSBGrefine_583:HG3_Ill_MetaSV_228:HG3_Ill_GATKHCSBGrefine_545:HG2_Ill_MetaSV_244:HG2_Ill_GATKHCSBGrefine_551:HG4_PB_SVrefine2PBcRDovetail_493:HG4_Ill_SVrefine2DISCOVARDovetail_620:HG2_PB_SVrefine2Falcon2Bionano_158:HG2_PB_SVrefine2Falcon1plusDovetail_598:HG2_10X_SVrefine210Xhap12_667:HG3_PB_SVrefine2PBcRDovetail_515:HG3_Ill_SVrefine2DISCOVARDovetail_547:HG2_PB_SVrefine2PBcRplusDovetail_599:HG2_PB_SVrefine2PB10Xhap12_717:HG2_Ill_SVrefine2DISCOVARplusDovetail_677:HG4_PB_SVrefine2Falcon1Dovetail_550;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_551:HG2_Ill_MetaSV_244:HG3_Ill_GATKHCSBGrefine_545:HG3_Ill_MetaSV_228:HG4_Ill_GATKHCSBGrefine_583:HG4_Ill_MetaSV_263;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0716511;ClusterMaxSizeDiff=0.0685358;ClusterMaxEditDist=0.195827;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=312;DistBack=-24;DistForward=24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=115;REFWIDENED=1:155974304-155974418;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=279.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:41:1/1:0:20:0:18:1/1:0:7:0:7:1/1:0:21:1/1:2:48:.:.:.
chr1	156297836	HG3_Ill_GATKHCSBGrefine_547	T	TCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCTGGCCTCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGGGGTCAGCCCCCCGCCCGG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_245:HG2_PB_pbsv_872:HG2_PB_assemblyticsPBcR_1228:HG3_PB_pbsv_887:HG2_PB_PB10Xdip_641:HG4_PB_assemblyticsfalcon_1209:HG2_PB_HySA_1627:HG2_PB_SVrefine2Falcon2Bionano_159:HG4_PB_SVrefine2PBcRDovetail_494:HG4_Ill_GATKHCSBGrefine_584:HG3_Ill_MetaSV_229:HG3_Ill_GATKHCSBGrefine_547:HG2_PB_SVrefine2PBcRplusDovetail_600:HG2_PB_SVrefine2PB10Xhap12_718:HG2_Ill_GATKHCSBGrefine_552:HG4_Ill_MetaSV_265:HG4_PB_SVrefine2Falcon1Dovetail_551:HG2_PB_SVrefine2Falcon1plusDovetail_599;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_552:HG2_PB_SVrefine2PB10Xhap12_718:HG2_PB_SVrefine2PBcRplusDovetail_600:HG3_Ill_GATKHCSBGrefine_547:HG3_Ill_MetaSV_229:HG4_Ill_GATKHCSBGrefine_584:HG4_PB_SVrefine2PBcRDovetail_494;NumExactMatchSVs=7;ClusterMaxShiftDist=0.200717;ClusterMaxSizeDiff=0.200717;ClusterMaxEditDist=0.250896;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=142;DistBack=1;DistForward=10;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=308;REFWIDENED=1:156297837-156298144;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:2:36:2:11:./.:0:2:0:7:1/1:0:15:./.:.:.:.:.:.
chr1	156705293	HG4_PB_SVrefine2PBcRDovetail_496	A	ACCAGCCTGGGCTACGTAGAGAGACCCTGTCTGTAAAAAAAAAAAAAAAAAAAAAAATAGGCAGGCATGGTAGCTCATACTTGTAGACCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGAGGTGTTTGAGGCTACAGTGAGCTATGATTGCCCTGCTGCTCTCCAGCCTGGGTGACAGGAAGACCCTGTCTTTAAAAATATATATTTGGGATGCCGAGGCTGGCAGATCACAAGGTCAGGAGATCAAGACCATCCTGGTGAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCTGGGCGTGGTGGCGAGTACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAAACCGGGAGGCGGAGCTTGTAGTGAGCCGAGATTGTGCTACTGCACT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_161:HG3_Ill_MetaSV_231:HG2_PB_HySA_1628:HG2_PB_PB10Xdip_642:HG4_PB_pbsv_881:HG3_Ill_SVrefine2DISCOVARDovetail_549:HG2_PB_pbsv_874:HG2_PB_assemblyticsPBcR_1230:HG4_Ill_SVrefine2DISCOVARDovetail_624:HG2_Ill_SVrefine2DISCOVARplusDovetail_683:HG2_PB_SVrefine2PBcRplusDovetail_602:HG2_PB_SVrefine2PB10Xhap12_721:HG3_PB_SVrefine2PBcRDovetail_517:HG3_PB_HySA_1301:HG3_PB_pbsv_889:HG4_PB_HySA_1264:HG2_PB_SVrefine2Falcon1plusDovetail_601:HG4_PB_SVrefine2PBcRDovetail_496:HG4_PB_SVrefine2Falcon1Dovetail_553:HG3_PB_SVrefine2Falcon1Dovetail_516:HG2_PB_SVrefine2PB10Xhap12_720:HG4_PB_assemblyticsfalcon_1211:HG3_PB_assemblyticsfalcon_1212;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_161:HG4_PB_SVrefine2PBcRDovetail_496:HG4_PB_SVrefine2Falcon1Dovetail_553:HG3_PB_SVrefine2Falcon1Dovetail_516:HG2_PB_SVrefine2PB10Xhap12_720;NumExactMatchSVs=5;ClusterMaxShiftDist=0.394265;ClusterMaxSizeDiff=0.394265;ClusterMaxEditDist=0.394265;PBcalls=19;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=418;DistBack=52844;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=1:156705294-156705349;PctSeqSimilarity=0.9868;PctSizeSimilarity=0.9905;PctRecOverlap=0.9173;SizeDiff=-4;StartDistance=-33;EndDistance=-33;GTMatch=0;TruScore=96;MatchId=281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:1/1:0:20:0:32:1/1:0:7:0:5:./.:0:1:1/1:2:55:.:.:.
chr1	159419782	HG3_Ill_Krunchall_1164	C	CCCGCCTGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGCAGCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAAGTGGGGGGCACCT	20	PASS	ClusterIDs=HG4_PB_pbsv_896:HG2_PB_PB10Xdip_652:HG3_PB_pbsv_900:HG4_Ill_GATKHC_1320:HG4_Ill_GATKHCSBGrefine_597:HG4_Ill_150bpfermikitraw_1055:HG3_Ill_Krunchall_1164:HG3_Ill_GATKHCSBGrefine_560:HG2_Ill_GATKHCSBGrefine_564:HG2_Ill_250bpfermikitraw_1105:HG2_Ill_150bpfermikitraw_1000:HG4_PB_HySA_1276:HG3_PB_HySA_1321:HG2_PB_HySA_1655:HG2_PB_pbsv_886;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1000:HG2_Ill_250bpfermikitraw_1105:HG2_Ill_GATKHCSBGrefine_564:HG3_Ill_GATKHCSBGrefine_560:HG3_Ill_Krunchall_1164:HG4_Ill_150bpfermikitraw_1055:HG4_Ill_GATKHCSBGrefine_597:HG4_Ill_GATKHC_1320;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0752688;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.268817;PBcalls=7;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=91;DistBack=-1;DistForward=4;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=5;REFWIDENED=1:159419781-159419788;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=283.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:62:1/1:3:36:0:10:./.:0:3:1:7:1/1:1:23:./.:.:.:.:.:.
chr1	161005678	HG2_PB_SVrefine2Falcon2Bionano_173	G	GGAAAACAGAAGACTAGAAGACTTAAGACAAAACAAAGAAGGAAATAGGCCCCAGAAGAAACTTCCCAACCTTTCTGAAAACCAAAACGTTTTGGGTATTTGGGGAAAGGGTAACTGACACTATTTGCCAGACTCTCGGTTAGACTCTTTCATGTATTTCAACTTTATCTCCAAATTCAACAATGTCTGGCTAAACTCAGACAGTAATGTGGTAAGATGAGCCCAGGGAGAAAGTGGGATAGCTCTGTGACAGGGAAGCTGGAGAGCCCAGAGGAATAGCAGATTTCATTGTGTATGGAGTGCATACTGTGAGATAAAAGATGTAGGAGGGGCCAGGTGCGGTAGCTCACTCCTGTAATCTCAGTACTTTGGGAGGCAGAAGCAGGCGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAACATGGT	20	PASS	ClusterIDs=HG2_PB_HySA_1667:HG2_PB_pbsv_892:HG3_PB_pbsv_906:HG4_PB_pbsv_903:HG2_PB_PB10Xdip_655:HG4_PB_HySA_1287:HG2_Ill_SVrefine2DISCOVARplusDovetail_705:HG3_Ill_MetaSV_243:HG3_Ill_GATKHCSBGrefine_567:HG4_Ill_MetaSV_278:HG4_Ill_GATKHCSBGrefine_603:HG2_Ill_MetaSV_257:HG2_Ill_GATKHCSBGrefine_572:HG2_PB_assemblyticsfalcon_1283:HG2_PB_assemblyticsPBcR_1256:HG3_PB_assemblyticsfalcon_1237:HG4_PB_assemblyticsfalcon_1236:HG3_Ill_SVrefine2DISCOVARDovetail_567:HG2_PB_SVrefine2PBcRplusDovetail_614:HG2_PB_SVrefine2PB10Xhap12_735:HG2_PB_SVrefine2Falcon2Bionano_173:HG2_PB_SVrefine2Falcon1plusDovetail_614:HG2_10X_SVrefine210Xhap12_685:HG3_PB_SVrefine2Falcon1Dovetail_526:HG3_PB_SVrefine2PBcRDovetail_529:HG4_PB_SVrefine2PBcRDovetail_508:HG4_PB_SVrefine2Falcon1Dovetail_565:HG4_Ill_SVrefine2DISCOVARDovetail_642;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_685:HG2_PB_SVrefine2Falcon1plusDovetail_614:HG2_PB_SVrefine2Falcon2Bionano_173:HG2_PB_SVrefine2PB10Xhap12_735:HG2_PB_SVrefine2PBcRplusDovetail_614:HG3_Ill_SVrefine2DISCOVARDovetail_567;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0791855;ClusterMaxSizeDiff=0.0791855;ClusterMaxEditDist=0.173228;PBcalls=18;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=432;DistBack=6231;DistForward=16145;DistMin=6231;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=1:161005679-161005684;PctSeqSimilarity=0.9989;PctSizeSimilarity=1;PctRecOverlap=0.9885;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=284.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:3:24:0:19:1/1:0:12:0:13:1/1:0:16:./.:4:49:.:.:.
chr1	161031072	HG4_Ill_SVrefine2DISCOVARDovetail_643	C	CAGCCTCCCAAGTAGCTGGAATTACAGACACGCGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACCGGGTTTCACCATGTTGGCCAGGCTGGTCTCGTACTCCTGACCTCAGGTG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_643:HG4_PB_pbsv_905:HG2_PB_HySA_1669:HG4_PB_SVrefine2Falcon1Dovetail_566:HG4_PB_SVrefine2PBcRDovetail_509;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_643:HG4_PB_SVrefine2PBcRDovetail_509;NumExactMatchSVs=2;ClusterMaxShiftDist=0.13278;ClusterMaxSizeDiff=0.107884;ClusterMaxEditDist=0.190871;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=122;DistBack=2180;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=165;REFWIDENED=1:161031073-161031237;PctSeqSimilarity=0.9774;PctSizeSimilarity=1;PctRecOverlap=0.7398;SizeDiff=0;StartDistance=-32;EndDistance=-32;GTMatch=0;TruScore=90;MatchId=285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:19:./.:17:15:3:2:./.:3:0:1:1:0/1:25:20:./.:.:.:.:.:.
chr1	162696889	HG2_PB_SVrefine2PB10Xhap12_739	A	AAAATATAAACATATATTTATATTTTGTAAATATAAACATATATTTATATTTTGTAAATATAAACATATATTTATATTTTGTAAATATAAACATATATTTATATTTTGTAAATATAAACATATATTTATATTTTGTAAATATAAACATATATTTATATTTTGTAAATATAAACATATATTTATATTTTGTAAATATAAACATATATTTATATTTTGTAAATATAAACATATATTTATATTTTGTAAATATAAACATATATTTATATTTTGT	10	PASS	ClusterIDs=HG3_PB_pbsv_910:HG4_PB_HySA_1313:HG2_PB_pbsv_898:HG3_PB_HySA_1344:HG4_PB_pbsv_911:HG2_PB_PB10Xdip_661:HG4_PB_SVrefine2Falcon1Dovetail_571:HG3_PB_SVrefine2Falcon1Dovetail_531:HG2_PB_SVrefine2PBcRplusDovetail_618:HG2_PB_SVrefine2PB10Xhap12_739:HG2_PB_SVrefine2Falcon2Bionano_176:HG2_PB_SVrefine2Falcon1plusDovetail_619;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_176:HG2_PB_SVrefine2PB10Xhap12_739:HG2_PB_SVrefine2PBcRplusDovetail_618:HG3_PB_SVrefine2Falcon1Dovetail_531:HG4_PB_SVrefine2Falcon1Dovetail_571;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0842105;ClusterMaxSizeDiff=0.0751342;ClusterMaxEditDist=0.242531;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=270;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=175;REFWIDENED=1:162696890-162697064;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=287.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:71:1/1:2:7:5:36:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr1	162838401	HG4_Ill_SVrefine2DISCOVARDovetail_651	C	CCCCACTGGAGAAACTGAAGACCTCTTTGTGGGAGAAGTTACCTGGAGTTGAGTCAATTTGGAGAGCCAAGTGAAATACAGGGGTGGAGGAGGCAGTGGAGAGGTCCTGGGGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_696:HG4_PB_assemblyticsfalcon_1252:HG4_PB_SVrefine2Falcon1Dovetail_573:HG2_PB_pbsv_900:HG2_PB_HySA_1699:HG4_PB_pbsv_913:HG4_Ill_250bpfermikitraw_1124:HG4_Ill_150bpfermikitraw_1083:HG4_PB_HySA_1316:HG4_PB_SVrefine2PBcRDovetail_515:HG4_Ill_SVrefine2DISCOVARDovetail_651:HG3_Ill_SVrefine2DISCOVARDovetail_576:HG2_Ill_SVrefine2DISCOVARplusDovetail_715;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_696:HG4_PB_SVrefine2PBcRDovetail_515:HG4_Ill_SVrefine2DISCOVARDovetail_651:HG3_Ill_SVrefine2DISCOVARDovetail_576:HG2_Ill_SVrefine2DISCOVARplusDovetail_715;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0944206;ClusterMaxSizeDiff=0.0944206;ClusterMaxEditDist=0.285714;PBcalls=7;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=112;DistBack=1809;DistForward=3958;DistMin=1809;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=119;REFWIDENED=1:162838402-162838520;PctSeqSimilarity=0.9962;PctSizeSimilarity=1;PctRecOverlap=0.823;SizeDiff=0;StartDistance=-20;EndDistance=-20;GTMatch=0;TruScore=93;MatchId=288.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:28:./.:31:10:9:17:./.:3:16:4:0:0/1:14:18:./.:.:.:.:.:.
chr1	163088849	HG3_PB_SVrefine2Falcon1Dovetail_532	A	AGGAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_621:HG2_PB_pbsv_902:HG3_PB_HySA_1348:HG3_PB_pbsv_913:HG2_PB_HySA_1702:HG3_PB_assemblyticsfalcon_1255:HG4_PB_assemblyticsfalcon_1255:HG2_Ill_MetaSV_260:HG3_PB_SVrefine2Falcon1Dovetail_532:HG4_PB_SVrefine2Falcon1Dovetail_574:HG3_PB_SVrefine2PBcRDovetail_535;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_532;NumExactMatchSVs=1;ClusterMaxShiftDist=0.136434;ClusterMaxSizeDiff=0.136434;ClusterMaxEditDist=0.213953;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=9976;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=1:163088850-163088865;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=289.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:33:0|1:26:2:3:32:0|1:28:0:0:11:0/1:19:11:0/1:8:19:.:.:.
chr1	163314431	HG2_10X_SVrefine210Xhap12_698	T	TAGAAGTGGGTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAACAAAATAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_1704:HG2_PB_pbsv_903:HG2_PB_assemblyticsPBcR_1280:HG3_PB_assemblyticsfalcon_1257:HG4_PB_pbsv_915:HG4_PB_assemblyticsfalcon_1256:HG2_PB_HySA_1705:HG4_PB_HySA_1321:HG2_PB_SVrefine2Falcon1plusDovetail_622:HG2_PB_SVrefine2PBcRplusDovetail_620:HG2_PB_SVrefine2PB10Xhap12_741:HG2_PB_SVrefine2Falcon2Bionano_177:HG2_Ill_GATKHCSBGrefine_578:HG2_10X_SVrefine210Xhap12_698:HG3_PB_SVrefine2PBcRDovetail_536:HG3_Ill_GATKHCSBGrefine_576:HG4_PB_SVrefine2Falcon1Dovetail_575:HG3_PB_HySA_1350:HG2_PB_PB10Xdip_663;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_698:HG2_Ill_GATKHCSBGrefine_578;NumExactMatchSVs=2;ClusterMaxShiftDist=0.152047;ClusterMaxSizeDiff=0.152047;ClusterMaxEditDist=0.192982;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=332;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:163314432-163314443;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=290.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:2:38:1:40:1/1:0:8:0:6:1/1:0:22:1/1:2:75:.:.:.
chr1	163598075	HG2_PB_SVrefine2Falcon2Bionano_178	C	CCCTCCCCCTCCCCCCTCCTCCTCCCCTCCCCCTCCTCTTCCCCTCCCCCTCCTCCTCCCCTCCCCCCTCCTCCCTCCCCCTCCTCTTCCCCCTCCCCTCCTCCTCCCCTCCCCCCTCCTCCCCTCCCCCTCCTCTTCCCCCTCCCCCCTCCTCTTCCCCCTCCCCCTCCTCCCCCTCCCCTCCTCCTCCCCCTCCCT	10	PASS	ClusterIDs=HG3_PB_pbsv_915:HG4_PB_SVrefine2Falcon1Dovetail_577:HG2_PB_PB10Xdip_668:HG4_PB_pbsv_917:HG2_PB_SVrefine2Falcon1plusDovetail_623:HG2_PB_SVrefine2PB10Xhap12_742:HG2_PB_SVrefine2Falcon2Bionano_178:HG2_PB_SVrefine2PBcRplusDovetail_621:HG3_PB_SVrefine2PBcRDovetail_537:HG2_PB_pbsv_904:HG3_PB_SVrefine2Falcon1Dovetail_534;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_178;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0987013;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.24;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=197;DistBack=-71;DistForward=-1;DistMin=-71;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=194;REFWIDENED=1:163598076-163598269;PctSeqSimilarity=0.9781;PctSizeSimilarity=0.961;PctRecOverlap=0.8537;SizeDiff=-8;StartDistance=-26;EndDistance=-26;GTMatch=0;TruScore=93;MatchId=292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:28:./.:0:4:0:2:./.:0:1:0:5:./.:0:2:./.:.:.:.:.:.
chr1	164204715	HG3_Ill_svaba_1092	G	GTAACTGCCTTGGCCTAGACTGTCTCTAACAGTAAGTACAATGATGTATAATTTGCGAGCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_687:HG3_PB_pbsv_919:HG2_PB_HySA_1713:HG4_PB_pbsv_921:HG4_PB_SVrefine2Falcon1Dovetail_580:HG2_PB_pbsv_908:HG4_Ill_svaba_1056:HG4_Ill_manta_210:HG4_Ill_Krunchall_1208:HG4_Ill_GATKHC_1360:HG4_Ill_GATKHCSBGrefine_612:HG4_Ill_250bpfermikitraw_1134:HG4_Ill_150bpfermikitraw_1091:HG3_PB_SVrefine2Falcon1Dovetail_537:HG3_PB_HySA_1357:HG3_Ill_svaba_1092:HG3_Ill_manta_178:HG3_Ill_SVrefine2DISCOVARDovetail_582:HG3_Ill_Krunchall_1199:HG3_Ill_GATKHC_1451:HG3_Ill_GATKHCSBGrefine_579:HG3_Ill_250bpfermikitraw_1143:HG3_Ill_150bpfermikitraw_1078:HG2_PB_SVrefine2PBcRplusDovetail_624:HG2_PB_SVrefine2PB10Xhap12_745:HG2_PB_SVrefine2Falcon2Bionano_181:HG2_PB_SVrefine2Falcon1plusDovetail_626:HG2_Ill_svaba_1060:HG2_Ill_manta_238:HG2_Ill_SVrefine2DISCOVARplusDovetail_722:HG2_Ill_MetaSV_262:HG2_Ill_Krunchall_1163:HG2_Ill_GATKHC_1391:HG2_Ill_GATKHCSBGrefine_581:HG2_Ill_250bpfermikitraw_1145:HG2_Ill_150bpfermikitraw_1039:HG2_10X_SVrefine210Xhap12_702:HG4_PB_HySA_1325;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_702:HG2_Ill_150bpfermikitraw_1039:HG2_Ill_250bpfermikitraw_1145:HG2_Ill_GATKHCSBGrefine_581:HG2_Ill_GATKHC_1391:HG2_Ill_Krunchall_1163:HG2_Ill_MetaSV_262:HG2_Ill_SVrefine2DISCOVARplusDovetail_722:HG2_Ill_manta_238:HG2_Ill_svaba_1060:HG2_PB_SVrefine2Falcon1plusDovetail_626:HG2_PB_SVrefine2Falcon2Bionano_181:HG2_PB_SVrefine2PB10Xhap12_745:HG2_PB_SVrefine2PBcRplusDovetail_624:HG3_Ill_150bpfermikitraw_1078:HG3_Ill_250bpfermikitraw_1143:HG3_Ill_GATKHCSBGrefine_579:HG3_Ill_GATKHC_1451:HG3_Ill_Krunchall_1199:HG3_Ill_SVrefine2DISCOVARDovetail_582:HG3_Ill_manta_178:HG3_Ill_svaba_1092:HG3_PB_HySA_1357:HG3_PB_SVrefine2Falcon1Dovetail_537:HG4_Ill_150bpfermikitraw_1091:HG4_Ill_250bpfermikitraw_1134:HG4_Ill_GATKHCSBGrefine_612:HG4_Ill_GATKHC_1360:HG4_Ill_Krunchall_1208:HG4_Ill_manta_210:HG4_Ill_svaba_1056:HG4_PB_SVrefine2Falcon1Dovetail_580;NumExactMatchSVs=32;ClusterMaxShiftDist=0.112;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.3125;PBcalls=13;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=60;DistBack=-60;DistForward=36502;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=62;REFWIDENED=1:164204716-164204777;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=293.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:1:15:0:10:1/1:0:16:1:16:1/1:0:50:./.:.:.:.:.:.
chr1	164409222	HG2_PB_SVrefine2Falcon1plusDovetail_627	A	AGAGGAGAGGAGGGGAGGGGAGGAGGGAAGGGGAGGAGGGTAGGGGAGGAGGGGAGCAGATGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGAGGGGAGGGGAGGAGGGGAGGGGAGGAGGGGAGGGAGGGGTAGAGGGAGGGGAGGAGGGAGGGGAGGAGGGGAGAGGGAGTGGAGGATGGGAGGGAAGGAGGGGAGGGGAGGAGGGGAGGGGAGGGAGGAGGGGAGGAAAGGAGGGGAGGGAAGAGAGGAGGGGAGGGGAGGAGGGAGGGAGGTGAGAAAGGGAGGGGAGGGGAAAAAGGGAGGGGAGGAGGGGAGGGGAGGAGGGGAGGAGGGGAGGGAGGAGGGGAGGAGGGGAGGGGAGGAGGGGAAGAGGGGAGGGGAGAAGGGGGGAGGAGAGGAGGGGAGGGGAGAAAGGGACGGGAGGAGGGGAGGGGAGGAGGGGAGGGGAGGAGGGATGG	10	PASS	ClusterIDs=HG4_PB_pbsv_922:HG3_PB_HySA_1359:HG2_PB_pbsv_909:HG2_PB_HySA_1716:HG4_PB_HySA_1327:HG2_PB_PB10Xdip_688:HG2_PB_SVrefine2PB10Xhap12_746:HG2_PB_SVrefine2PBcRplusDovetail_625:HG2_PB_SVrefine2Falcon1plusDovetail_627:HG2_PB_SVrefine2Falcon2Bionano_182:HG4_PB_SVrefine2Falcon1Dovetail_581:HG4_PB_SVrefine2PBcRDovetail_517:HG3_PB_pbsv_920:HG3_PB_SVrefine2Falcon1Dovetail_538;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_627;NumExactMatchSVs=1;ClusterMaxShiftDist=0.092925;ClusterMaxSizeDiff=0.0908131;ClusterMaxEditDist=0.264674;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=465;DistBack=-74;DistForward=-1;DistMin=-74;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=1:164409223-164409290;PctSeqSimilarity=0.9865;PctSizeSimilarity=0.9769;PctRecOverlap=0.9644;SizeDiff=-11;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=97;MatchId=294.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:0:33:0:6:./.:0:2:0:6:./.:0:2:0/1:3:15:.:.:.
chr1	165154740	HG2_PB_pbsv_911	A	ACAAGGAAGAAGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGATGGGGAATGAGGAGGGAGGAGGAGGGAGGGGAGGAAGGAAGGAAGGAAGGAAGAAGGGAGGAGGGAGGGAGGGAGGGAGGGGAGTGAGGAAGGAAGGAAGGAAGGGAGAGAGGGAGGGAGGAGGGAGGGAAGGAGGGAGGGAGGGCAGGAAGGAAAGGAAGGAAGGGGAGAGAGGGAGGGAGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGAAGGAAGGCAAGCGGAGAGAGCGAGAGGGAGGGAGGAGAAGGAAGGAGGAAGGAGGCAGGGAGAGAGGGAGGGAGTTGAGGGGAGGGAGGGAGGGGAGGAAGGAAGGAAGGAAGGGGAGAGAGGAGGGGAGGCGAGGGAGGGAGGGAGGAAGAAGGAAGCGAAGGGAAGAGGGGAGAGGGGAGGGAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_540:HG4_PB_SVrefine2Falcon1Dovetail_582:HG2_PB_pbsv_911:HG3_PB_pbsv_922;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_911;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0625724;ClusterMaxSizeDiff=0.0625724;ClusterMaxEditDist=0.215527;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=444;DistBack=3;DistForward=19;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=134;REFWIDENED=1:165154734-165154867;PctSeqSimilarity=0.9445;PctSizeSimilarity=0.9933;PctRecOverlap=0.9485;SizeDiff=-3;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=96;MatchId=295.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:0|1:26:4:1:26:./.:34:0:2:1:0/0:20:0:0/1:7:4:.:.:.
chr1	165505878	HG3_Ill_svaba_1101	A	AATTTGGAATGAGACAAAAGGACCAAGGTGAGAATTAGGTGAGGACTGCGCCTCTGACTCC	20	PASS	ClusterIDs=HG2_PB_HySA_1728:HG4_Ill_Cortex_180:HG3_Ill_Cortex_193:HG2_Ill_Cortex_388:HG2_PB_pbsv_912:HG4_PB_pbsv_924:HG3_PB_pbsv_923:HG2_PB_PB10Xdip_690:HG4_Ill_svaba_1069:HG4_Ill_manta_211:HG4_Ill_Krunchall_1222:HG4_Ill_GATKHC_1377:HG4_Ill_GATKHCSBGrefine_614:HG4_Ill_250bpfermikitraw_1149:HG4_Ill_150bpfermikitraw_1107:HG3_PB_assemblyticsfalcon_1283:HG3_Ill_svaba_1101:HG3_Ill_manta_179:HG3_Ill_Krunchall_1208:HG3_Ill_GATKHC_1464:HG3_Ill_GATKHCSBGrefine_582:HG3_Ill_250bpfermikitraw_1155:HG3_Ill_150bpfermikitraw_1089:HG2_PB_assemblyticsfalcon_1321:HG2_PB_assemblyticsPBcR_1299:HG2_Ill_svaba_1072:HG2_Ill_manta_240:HG2_Ill_SpiralSDKrefine_854:HG2_Ill_Krunchall_1176:HG2_Ill_GATKHC_1405:HG2_Ill_GATKHCSBGrefine_584:HG2_Ill_250bpfermikitraw_1160:HG2_Ill_150bpfermikitraw_1054:HG4_PB_HySA_1336:HG3_PB_HySA_1368;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1054:HG2_Ill_250bpfermikitraw_1160:HG2_Ill_GATKHCSBGrefine_584:HG2_Ill_GATKHC_1405:HG2_Ill_Krunchall_1176:HG2_Ill_SpiralSDKrefine_854:HG2_Ill_manta_240:HG2_Ill_svaba_1072:HG2_PB_assemblyticsPBcR_1299:HG2_PB_assemblyticsfalcon_1321:HG3_Ill_150bpfermikitraw_1089:HG3_Ill_250bpfermikitraw_1155:HG3_Ill_GATKHCSBGrefine_582:HG3_Ill_GATKHC_1464:HG3_Ill_Krunchall_1208:HG3_Ill_manta_179:HG3_Ill_svaba_1101:HG3_PB_assemblyticsfalcon_1283:HG4_Ill_150bpfermikitraw_1107:HG4_Ill_250bpfermikitraw_1149:HG4_Ill_GATKHCSBGrefine_614:HG4_Ill_GATKHC_1377:HG4_Ill_Krunchall_1222:HG4_Ill_manta_211:HG4_Ill_svaba_1069;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0813008;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.144;PBcalls=10;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=60;DistBack=6718;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:165505877-165505880;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:60:./.:0:0:0:1:1/1:0:21:0:15:1/1:0:46:./.:.:.:.:.:.
chr1	165659304	HG2_PB_SVrefine2PB10Xhap12_750	T	TAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_1302:HG3_PB_HySA_1371:HG4_PB_pbsv_926:HG2_PB_SVrefine2Falcon1plusDovetail_630:HG2_PB_assemblyticsfalcon_1324:HG4_Ill_MetaSV_285:HG4_Ill_SVrefine2DISCOVARDovetail_667:HG4_Ill_GATKHCSBGrefine_615:HG2_PB_SVrefine2PBcRplusDovetail_629:HG2_PB_SVrefine2PB10Xhap12_750:HG2_Ill_SVrefine2DISCOVARplusDovetail_730:HG2_Ill_MetaSV_263:HG2_10X_SVrefine210Xhap12_710:HG3_Ill_SVrefine2DISCOVARDovetail_590:HG3_Ill_MetaSV_248:HG3_Ill_GATKHCSBGrefine_583:HG2_PB_SVrefine2Falcon2Bionano_185:HG2_Ill_GATKHCSBGrefine_585:HG4_PB_HySA_1338:HG2_PB_pbsv_913:HG3_PB_pbsv_925:HG2_PB_HySA_1730:HG2_PB_PB10Xdip_691;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_710:HG2_Ill_MetaSV_263:HG2_Ill_SVrefine2DISCOVARplusDovetail_730:HG2_PB_SVrefine2PB10Xhap12_750:HG2_PB_SVrefine2PBcRplusDovetail_629:HG4_Ill_GATKHCSBGrefine_615:HG4_Ill_SVrefine2DISCOVARDovetail_667;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0994671;ClusterMaxSizeDiff=0.0959147;ClusterMaxEditDist=0.223368;PBcalls=13;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=275;DistBack=55314;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=1:165659305-165659306;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=297.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:1/1:1:28:0:21:1/1:0:7:0:12:1/1:0:18:./.:.:.:.:.:.
chr1	165677374	HG2_Ill_SVrefine2DISCOVARplusDovetail_731	C	CCTCTCTCTCTGCCTCTCTCCCCGTCTCTCTCTCTCTGCCTCTCTCCCCGTCTCTCTCTCTCTGCCTCTCTCCCCGTCTCTCTCTCTCTGCCTCTCTCCCCGTCT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_731:HG4_PB_HySA_1339:HG4_PB_pbsv_927:HG2_PB_pbsv_914:HG4_Ill_SVrefine2DISCOVARDovetail_668;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_731:HG4_Ill_SVrefine2DISCOVARDovetail_668;NumExactMatchSVs=2;ClusterMaxShiftDist=0.047619;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.159624;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=104;DistBack=-1;DistForward=13;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=86;REFWIDENED=1:165677375-165677460;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:33:1|0:3:23:32:3:./.:2:17:2:16:1/1:2:30:./.:.:.:.:.:.
chr1	165861383	HG2_PB_SVrefine2Falcon2Bionano_187	T	TCTGAAACATTTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGTTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCGGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAATCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCCTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGATGGTGGCAGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACATCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCCGACATCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTCACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTCACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGATGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCGGGCAGAGGGTCTCCTCACTTCTCAGATGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCAGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGAGGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTAGGCAGCCAGGCAGAGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCAGCCGGGCAGAGGCTGCAATCTTGGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGTTGGCGGATCACTCGCGGTTAGGGGCTGGAGACCGGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAACCAGTCAGGCGTGGCGGCGCGAGCCTGCAATCGCAGGCACTGGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGTTCCGCATGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3037:HG2_PB_pbsv_916:HG3_PB_pbsv_927:HG2_PB_assemblyticsPBcR_1307:HG2_PB_assemblyticsfalcon_1330:HG3_PB_assemblyticsfalcon_1288:HG2_PB_HySA_1735:HG2_PB_SVrefine2PB10Xhap12_752:HG2_PB_SVrefine2PBcRplusDovetail_631:HG2_PB_SVrefine2Falcon2Bionano_187:HG2_PB_SVrefine2Falcon1plusDovetail_632:HG3_PB_SVrefine2Falcon1Dovetail_543:HG2_PB_PB10Xdip_692;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_187;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0592969;ClusterMaxSizeDiff=0.0592969;ClusterMaxEditDist=0.146634;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=2355;DistBack=242;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=1:165861384-165861400;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9983;PctRecOverlap=0.9983;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:48:1|0:0:21:19:4:./.:28:0:0:3:./.:19:2:0/1:70:173:.:3010:.
chr1	166646674	HG2_Ill_GATKHC_1415	G	GTGTATATATATATATATATATACTTATCCATTGTAGATATGGATTTGTATATATA	20	PASS	ClusterIDs=HG3_PB_pbsv_929:HG4_Ill_250bpfermikitraw_1159:HG2_PB_PB10Xdip_694:HG3_PB_assemblyticsfalcon_1296:HG2_PB_assemblyticsfalcon_1337:HG2_PB_assemblyticsPBcR_1313:HG2_Ill_250bpfermikitraw_1171:HG4_PB_HySA_1344:HG3_Ill_250bpfermikitraw_1175:HG3_Ill_150bpfermikitraw_1107:HG2_Ill_GATKHC_1415:HG2_Ill_GATKHCSBGrefine_589:HG2_PB_HySA_1744;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_589:HG2_Ill_GATKHC_1415:HG3_Ill_150bpfermikitraw_1107:HG3_Ill_250bpfermikitraw_1175;NumExactMatchSVs=4;ClusterMaxShiftDist=0.230089;ClusterMaxSizeDiff=0.230089;ClusterMaxEditDist=0.311927;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=130;REFWIDENED=1:166646606-166646735;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:51:1/1:1:16:0:12:./.:2:10:1:25:1/1:0:36:./.:.:.:.:.:.
chr1	167175226	HG2_PB_SVrefine2PB10Xhap12_757	T	TGTGTGTGTGTGTGTGTGTATGTATAAAGGCTTCTACTCTGAAAGTAGGAATAATTCTACAATAATTTATATAAATGGGGAAATATATATCTCTAATTAGTATCTTCTACTTATAGGGACTAGTAGGGAATAGGAACAATGAGAAGAAAGGAAAAACAGAAAATTTAAATCCTCATTAGTCTTTGTTGCTAAAATGTAGAACCCAGCATGAATGTCTTTTACTTTACCAGGGCACCCGAATGCATTTTTGGATATGGAAAGGTGGACCAGAGTTGAGTCTGGGAAGTGTAGAGTGAAATTACTCTAAATATATAATAAAGAGAGGAAATAGGAAAAGAGGTTAACTTCCACTTATGTGGCCTGTGGGTTGTTTAGGTTGTTGTGAAGAAAAGAAGAAGAGGCCGGACGTGGTGGCTCACTCCTGTAATTCCAGCACTTTGGGAGACTGAGCCAGGCAGATCACCTGAGGTTGGGAGTTCGAGACCAGCCTGGCCAACATGGCAAAACCCCGTCACTATTAAAAATACAAAAATTAGCTGGGCATGGTGGTGCACTCTGTGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATTGCACCACTGCACTCTAGCCTAGGTGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAAAGAAAAAGAAAAAGAAAAGAAAAGAAGAAGAGAAGAGGCCCTGGAGTGAAATAAAAGTGAGATCCAGAATGCAGACAGAGTAGGGCTCAGCACCAGAAGTGACCATGAGATCATGAGCTTCCAAGCATTTGCAGCATTATATGAGGGAAGTAGGATAGGTATTAGAATTAGCACAAAATGATGTGGGCTAGGAGACTTGAAGCAATTATATTTAAGTCTCAAAGGACCAAGTAATTTCTGCTGACAAATATAACCATTTATGGTTGTTTAAGCATTGAATCAAGTCTGGAAAGTGTGCACCAAACTATTCCTGGTGATAACTATGACTCATTCCTTGAGATTCTAACTCACTAGATTTCTAATGGGGCCTCTGAGCAAGTTCATTAAAAAATTTATTCAGAAGCACTATCAACCATTGCTGAGAGAAATAAAAACATGAATAGATACAGAGATACAACATGCTCATGAACTGGAAGACTGAGTTTTGTAAAGATGTCAAATATCCCCAAACTAACCTACAGGTATAATGCCACCTCAATCAAAAGGCCAACCAAATTTTTTCCAGAAATTGATAATCCAGTTTTAAAATTTGTATGAAAATGCAAAGGGTCAAGACAGCCAAGGCAGCCTTAAAGAGAAAGAAGTCAGAGGACTTTTATGCTATCAGACATCCAAACTTATTATAACACTAAACAACAACAACAAATACTGTTATAGATGGCATAGAAAGAGACAAATAGATGAATGGAACAACATAAAGAGTACAGAAACAAAGCCCCACAACTGGCTCATGACACTTGATTTATGACAAAGGTGTCCACTGCAAAGCAAGAGAGGAAGGGTGGTCTTTTCGATAGGTAGTGCTGGGTCGGTTGATATCCCTCCATATGGAGAGAAAACGACTGTTGACCTCTACCTACACCACACACAAAAAGTCAATTCCAGATGGACATTTGATGTAAATGTGAAGGTTAAAACAATAAAGCTTCTAGAAGATAACATCGGGAAATGTATTTGTAACATGACAGGAATCCTCCCCCAAAACAACAAGAACTGCCAAGCCTAGGGTAGCCAACGACTTCAATTTACCTGGGACTATCCTTGTTTCAGCATTGACATTGCACGTCCTGGGAAACCCCTTAATTCCTGGCAAACTGGGGTGGTTGGTGACTCTACCTACATACCATAAAGGAAAAGATTGGAAAGTGGACTACGGGTCAGGCACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAACGCCGTCTCTACTAAAAATACAAAAAAAAAAAAAAAAAGTTAGCTGGGTGTGGTGGCGGGCGCCTATAGTCCCAGCTATTTGGGAGGTTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCAGAGCTTGCAGTGAGCCAAGATGGCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTCTCTCACAAAAAAAAAAAAAAAAAAAAGTGGAGTATGTAAAGCAAAAAACTTCTTTTCATTAAAAGACATGGCTGAGAGAGTGAAAAGGCAAACCGCAGATGGGAGGAGATATTTAGAGTACATTAGCTGTATTAGTCCATTTTGTGTTGTTATAAAGGAATACATGAGACTGGGTAATCTATAAAGATAAGTTTATCTGGCTCAGGATTCTACATGGCACCAGAATCCATTCTGCTTCTGGTGAGGGCTCAGGAAGCTTTTACTCATGGCAGAAGGCAAAGGGGGAGCAGATGTGTGACAGAATTGAGAGAGAGAGAGAATTGAGAGAGAGGGAGGTGCAGGCTCTTTTTAACAACTGGATGTTGCATGAATTCATTACCCCGAGGACCAAAACACCCCCCCACTAGGCCCCACCTCCAACACTGGGGAATCACATTTCAACATGAGATTTGGAGGGAACAAATATCTAAACAATATGACTAGCCAACAAAGTATTCATATGTAATGAGCTCCCACAAATCAATAAGAAAATACAATGGTAAAATTAGCAAAAGTCTTAAAAAGGCATTTCACAGGCCAGGCACAGTGGCTTACGCCTGTAATCCCAACACTTGGGAGGCCAAGGTGGGCAGATCACCAAAGGTTGGGAGTTCCAGATCACCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAATTAGCTGGGCGTGGTGGTGCACGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGCGTTGCTTGAACCAGGGAGGCAGAGGTTGCAGTGAGCCAGCGTCGAGCCACTGGGCGACAGAGTGAGAGAAAAAAAAAAAAAGGCATTTCACAAAATAGTCACCAAACATACTGAAAGTTAATGTACTAAGTCATGAGAGGGACGCACATTAGAACCACAATAAGAAACTTCTACATGCTCTCCAGGAGGTTTAAATGTGGGTCTGTGGAACCCTTTGGGAAGTGAGGAGTGCCTCTGCCCTGCTCCCGTCCTGTCTGGGAAGTGAGGAGCACCTCTGCCTGGCCGCTGTGCAACCCTCCAAGTGTGAAGTGGCAGCCTTGTGTGTGATCTTTCTGCCCTCCCCAAGTTTGCATTTTTGACATTAAAGTTTACTTTTAAATTAAAAGTTTTATATTGGGGAATATATATATTATATATAATAGTATATATTATAATATATAATATAATATATAATATTATATATTATATTATATAATATAATATTATATATTATATATTATATAATATATAATATTATATATTATATATTATATAATATATAATATTATATATTATAATATAATATAATATATAATGTATATATAATATACATTATATATACACATACATTATAATATATAATATATTATATATATTAAATATATAATATATATTATATATACATATATATTATATATGTATATATAAAGTGGGTCTGCCGGATGACAAGGAGGATCCAGACAGGATCGAAGTACAGATCCTCCTTTCAGGCACATCAAGAGGCATTCCCAGAGAGGTAAGAAGGGAATCATTTCACAGTAGTTATTGAATGTTATTTTTAATTTTACATTCTATTGTGCCTAAGTTGTTTAGAAAACTATACAGAATTTATGCCATGATGTGAGTTATATTATTCTCAATTAATCCATTTGTCTGTCTTTGTGAAATCAAGAAACAAAACTCAATACAGAGGATTTTAGAAAGAGATTCTGCATAGGGTGGGTTCCCCAAATATACGGAGTGAAGATTCTCATGCCTGCAGTGGGCATGTGGAAGGTTCAGCTCCCCCTACAGAAGGATGCCCAAGTAATCCCTGTTTCTGTGTTGCATGCACTCCTGAACTGGCACTGAATCCTATCAGCTGGAGATAAATGAGGCCTGCCACAGGGAGTGGGAGAGGCCAGAGCCCAAAGGCACACACTTTTAGAGAACACAACACTATGTTTTAAGCTACTCTGTGTGTGTGTGTGTATGTGTGTTTAAATCACTACTCTATATAATGCTGGGATTTAAAAAACAAACAAACAAACAAACAAACAAACTTAAGGCCAGGCACGGTGTCTCACACATTTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACTTGATTCAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_697:HG3_PB_pbsv_932:HG4_PB_pbsv_933:HG2_PB_pbsv_922:HG3_PB_SVrefine2Falcon1Dovetail_546:HG3_PB_assemblyticsfalcon_1301:HG2_PB_SVrefine2Falcon1plusDovetail_635:HG2_PB_assemblyticsfalcon_1342:HG4_Ill_SVrefine2DISCOVARDovetail_677:HG3_Ill_SVrefine2DISCOVARDovetail_598:HG2_PB_SVrefine2PBcRplusDovetail_636:HG2_PB_SVrefine2PB10Xhap12_757:HG2_PB_assemblyticsPBcR_1318:HG2_10X_SVrefine210Xhap12_720:HG2_Ill_SVrefine2DISCOVARplusDovetail_738:HG2_PB_SVrefine2Falcon2Bionano_191:HG4_PB_SVrefine2Falcon1Dovetail_588:HG3_PB_HySA_1392:HG4_PB_HySA_1351:HG2_PB_HySA_1751;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_757:HG2_PB_SVrefine2PBcRplusDovetail_636;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0861663;ClusterMaxSizeDiff=0.0859419;ClusterMaxEditDist=0.197531;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=4369;DistBack=12001;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:167175227-167175227;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9957;PctRecOverlap=0.9959;SizeDiff=19;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=301.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:85:1/1:0:35:0:23:1/1:0:17:0:11:1/1:0:27:1/1:1:538:.:4332:.
chr1	168364733	HG2_PB_SVrefine2PB10Xhap12_760	C	CTTCTGAAGTATCACTATCTTTTGGTTCCTTCCTAGCCCTGCCTTCTTCATGGAATCCTCTTCTTTTGCCCACTTAAACTTCGGTGTTTCTCTTCTTACACCATACCCTAATGGTGAGTGACCTTATTTAAAGCCAATTTCAGCTTCCACAGATGAGTACCAATTATCTCCAGCCTTCCCTCTGGTGTCCCACAGAGCTATCTCTCTACTAGATAGTTCTACTAGGATGCACATAGGCATTTCAAGTTCAGTATGCTAAATTCTTGGCAAAACACACAACTCCTGCTATATTTCTTATTCCCTTAAATGGCATCACAGGTCCCTTATTTGTTCATTTCAAGGATGACTCCTTTCACTCACTTGTGCATCTTCTCTAACTCAACAAACCAGTCACCACCTTCCGTGGCCTCCTTAAACTCTCCCATATCCATTAACATGCCTCCATCCTCACTGATGTTGCCTCGGATTAGTCCTTCATTGCTTCTTGCCTGGGTTACTATATGTAGTTACCATAAAGTAACCCAGGTTAACATTCTTTCTGCCATCAGTATTTTCCACCCTCCAATACATCTTCTATACTGCAGACTGAGTCATTTTTCTCAAATCCAATTTCCAAATTGATATGTCACTCTCCTCCAGTGGATTTTTCTCAATGTGCTCCTTAGTAAAGTGTTTCAAGGTCTAGCTTTTGCTTACCTCTCTAGAATCATTTCTCTTTACTAGGCTACGTACATTATTTGCTCCAATAGTACTACCCAGCCAAGGCCTGAGCTTCTACAAAATTTTTTTGCTTCTTTTTTGTCCTAACTTGCTTTCCTGTCTTTGAGCT	20	PASS	ClusterIDs=HG4_PB_HySA_1359:HG4_PB_pbsv_937:HG3_PB_pbsv_937:HG3_PB_assemblyticsfalcon_1314:HG2_PB_assemblyticsfalcon_1353:HG2_PB_assemblyticsPBcR_1329:HG2_PB_PB10Xdip_699:HG4_PB_SVrefine2Falcon1Dovetail_590:HG4_Ill_MetaSV_287:HG3_PB_SVrefine2Falcon1Dovetail_549:HG3_Ill_SVrefine2DISCOVARDovetail_601:HG3_Ill_MetaSV_251:HG3_Ill_GATKHCSBGrefine_590:HG2_Ill_MetaSV_268:HG2_10X_SVrefine210Xhap12_724:HG4_Ill_SVrefine2DISCOVARDovetail_681:HG4_Ill_GATKHCSBGrefine_623:HG2_PB_SVrefine2PBcRplusDovetail_638:HG2_PB_SVrefine2PB10Xhap12_760:HG2_PB_SVrefine2Falcon2Bionano_193:HG2_PB_SVrefine2Falcon1plusDovetail_637:HG2_Ill_SVrefine2DISCOVARplusDovetail_749:HG2_Ill_GATKHCSBGrefine_591:HG2_PB_pbsv_926;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_591:HG2_Ill_SVrefine2DISCOVARplusDovetail_749:HG2_PB_SVrefine2Falcon1plusDovetail_637:HG2_PB_SVrefine2Falcon2Bionano_193:HG2_PB_SVrefine2PB10Xhap12_760:HG2_PB_SVrefine2PBcRplusDovetail_638:HG4_Ill_GATKHCSBGrefine_623:HG4_Ill_SVrefine2DISCOVARDovetail_681;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0633431;ClusterMaxSizeDiff=0.0633431;ClusterMaxEditDist=0.212349;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=828;DistBack=37923;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=1:168364734-168364736;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=303.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:32:0:27:1/1:0:17:0:10:1/1:0:23:./.:7:85:.:.:.
chr1	168379694	HG3_PB_assemblyticsfalcon_1315	TTGGAGTGGTGG	GGTGGTGGTGGGGGTAGGTGGCAGAGTGAGTGGGTGGTGAGGGTGGGGGCTGATGTGGTGGTGGGAGCTGGTGGTTGGGGGTGTTGGGGGTGGTGATGGTGGTGGTGGTTGGGGGGGAGGTGTGGTGGTGGGGATGAGGGTAGGGAGCTGGAGATGGTGGTGGGGTGGTCGGGGTGGGGGGGTAATGGTGAGGGGTGATGGTGGGGGTGGTGGTGTGAGGGTGGGGTTGGTGGTGGTGGTAGTGGTGGGGGCTGGTGGTAGGGGGTGGGGTGGGTGGTGATGATGGGTGGTGGTGGGGGCTGGTGATGGTGGGGGTTGATGGTGGTGGGGGTAGTGGGGTGGTGATGGTGGTGGTGGGGATTGGTGGGGGTGGTGGGGTGGTGATGGTGGTGATGGGAGGTGGTGGTGGGGGTGGTGGTGGAGGGTGTGGGTGGTGGGGTGGTGGTGGTGGGGAGTGGTGGGTGTGGTGGTGGTGGGGAGTGGTGGGTGTGGTGGTGGTGGGGAGTGGTGGGTGTGGTGGTGTGTGTGGTTGTGGTGGTGGTGGTGGTGGTGGGGGTGATGGTGGTGGTCGTTGGTGGTGGTGGTAGCGGGGTGATGGTGGTGGTGGGTGGTGGTGGGGTGATGGTGGTGGGGGTGGGGTGGTGGTGGGGTGATGGTGGTGGGTGGTGGAGAGTGGTGGGTGTGGTGGTGTGTGTGGTAGTGGTGGTGGGGGGGGTGATGGTGGTGGTCGTCGTTGGGGGTGATGGTGGTGGTCGTCGTTGGGGTGGTGGTGGGGTGATGGTAGTGGTGGGTGGTGGCGGTGGGTGGTGGTGGGGGGTGGTGGGGGGGTGGTGGTGGTGGGAGGTGATGGTGGTGGGGTGGTGGTGGTGGGAGTGGCGGGTGTGGTGGTGTGTGTGGTTGTGGTGGTGGTGGGGGTGAAGGTGGTGGTCGTCATTGGGGGTGGTGGTAGTGGGGTGATGGTGGTGGTGGGTGGTGGTGGTGGGTGGTGGTGGGGTGTGTGGTGGTGGTGAGGAGGTGATGGTGGTGGGGTGGTGGTGGGGAGTGGTGGGTGTGGTGGTGTGTGTGGGTTGTGGTGGTGGTGGGGGGGTGATGGTGGTGGTCGTCGTTGGGAGTGGTGGCAGGGGGGTGATGGTGTGGTGGGTGGGTGTGGTGGTGGGGTGTGGTGATGGTGGGTGGTAGTGGTGGGGTGGTGGT	20	PASS	ClusterIDs=HG3_PB_pbsv_938:HG2_PB_HySA_1761:HG2_PB_pbsv_927:HG3_PB_assemblyticsfalcon_1315:HG2_PB_assemblyticsPBcR_1330:HG2_PB_assemblyticsfalcon_1354:HG4_PB_HySA_1360:HG3_PB_HySA_1403:HG3_PB_SVrefine2Falcon1Dovetail_550:HG4_PB_SVrefine2Falcon1Dovetail_591:HG2_PB_SVrefine2PB10Xhap12_761:HG2_PB_SVrefine2PBcRplusDovetail_639:HG2_PB_SVrefine2Falcon1plusDovetail_638:HG2_PB_SVrefine2Falcon2Bionano_194:HG2_Ill_breakscan11_3039:HG2_PB_PB10Xdip_700;NumClusterSVs=16;ExactMatchIDs=HG3_PB_assemblyticsfalcon_1315;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0919726;ClusterMaxSizeDiff=0.0919726;ClusterMaxEditDist=0.220103;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1182;DistBack=-1;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:168379695-168379693;PctSeqSimilarity=0.9823;PctSizeSimilarity=0.9625;PctRecOverlap=0.9715;SizeDiff=-46;StartDistance=0;EndDistance=11;GTMatch=1;TruScore=97;MatchId=304.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:22:0:17:./.:6:5:9:11:0/1:7:14:0/1:13:67:.:1303:.
chr1	168420928	HG2_PB_SVrefine2PB10Xhap12_762	T	TCACTGGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCTCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGCGTCTGGCCGGGCGGGGGGCTGACCCCCCCACCACCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCTCACCTCCCGGACGGGGCGGCCGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGCTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGGCGCTCCTCACATCCCAGACAGGGTGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGACTGGGAAGAGGCGCTCCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACACTCCTCACTTCCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCATATCCCAGACGATGGGCGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATCGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCGTGGAAGGAGACCGTGGAGAGGGAGAGGGGAGGGAGAGGGAGAGGGACAGGGACAGGGACAGGGACAGGGGAGTTCTTTATTTAAATCAACAAACTCATATTCCTCAAGCCCCAGACCATGGTAGGCAGCCCTCCTTTCTCTGTTCCCTCACCCCTACTCCCTAGCCACAGTGAGGGGAATGGAAAATGAGAAGCCACGAGGGCCTCTGCCAGGGAAGCCTACCCCAGATGTGTGGTGAGCACGGTGCAGCAGTGGCTGGGGTAGCAACCGCCACAAGCCCCTCCCTATAAATTAAGTCCCTGCAGCCACAGCTGTGGGAGAACTAAAAACCGCCTTTGCAAAATTATGACTGAGACAGTGAAAGAGATCTAACTAACTGACTCCATATTGTTCTACTTTAAGCTGTCTTGTTCCTTCCTGGCAAAGCGAACTAACTTTGAGAGGAACTTAGTTTACAGCTTAAAACAAAGATGATAACAGCCCTTTCCCCA	20	PASS	ClusterIDs=HG2_PB_pbsv_928:HG2_PB_PB10Xdip_701:HG3_PB_pbsv_940:HG2_PB_assemblyticsfalcon_1355:HG2_PB_SVrefine2Falcon1plusDovetail_639:HG2_PB_SVrefine2PBcRplusDovetail_640:HG2_PB_SVrefine2PB10Xhap12_762:HG4_PB_SVrefine2Falcon1Dovetail_592:HG3_PB_SVrefine2Falcon1Dovetail_551:HG2_PB_HySA_1762:HG2_Ill_breakscan11_3040;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_762;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0386893;ClusterMaxSizeDiff=0.0386893;ClusterMaxEditDist=0.21609;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=2499;DistBack=7160;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:168420929-168420940;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9893;PctRecOverlap=0.9889;SizeDiff=-27;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:83:0|1:27:3:1:47:0|1:22:0:0:8:0/1:21:8:0/1:79:223:.:4227:.
chr1	169523397	HG2_Ill_GATKHCSBGrefine_604	T	TGACCTCCCTAGCCCTCCCTGAATTTTTAATAGAAAGTACATTCACGTAATTTTTATTACAGAGAAAACTCTCACTTTTCTCTGATAACCCTCAATG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_735:HG3_PB_assemblyticsfalcon_1327:HG2_PB_pbsv_939:HG2_PB_PB10Xdip_710:HG3_PB_SVrefine2Falcon1Dovetail_558:HG4_PB_SVrefine2Falcon1Dovetail_598:HG4_Ill_svaba_1102:HG4_Ill_manta_218:HG4_Ill_Krunchall_1260:HG4_Ill_GATKHC_1417:HG4_Ill_GATKHCSBGrefine_629:HG4_Ill_Cortex_185:HG4_Ill_250bpfermikitraw_1188:HG4_Ill_150bpfermikitraw_1140:HG3_Ill_svaba_1144:HG3_Ill_manta_189:HG3_Ill_Krunchall_1252:HG3_Ill_GATKHC_1513:HG3_Ill_GATKHCSBGrefine_599:HG3_Ill_Cortex_199:HG3_Ill_150bpfermikitraw_1135:HG2_Ill_svaba_1109:HG2_Ill_manta_248:HG2_Ill_Krunchall_1211:HG2_Ill_GATKHC_1445:HG2_Ill_GATKHCSBGrefine_604:HG2_Ill_Cortex_397:HG2_Ill_250bpfermikitraw_1197:HG2_Ill_150bpfermikitraw_1092:HG2_PB_SVrefine2Falcon2Bionano_202:HG2_PB_HySA_1775:HG4_PB_HySA_1374:HG2_Ill_breakscan11_3041:HG3_PB_pbsv_949:HG3_Ill_SVrefine2DISCOVARDovetail_610:HG2_PB_SVrefine2PBcRplusDovetail_648:HG2_PB_SVrefine2PB10Xhap12_770:HG2_PB_SVrefine2Falcon1plusDovetail_646:HG2_Ill_SVrefine2DISCOVARplusDovetail_758;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1092:HG2_Ill_250bpfermikitraw_1197:HG2_Ill_Cortex_397:HG2_Ill_GATKHCSBGrefine_604:HG2_Ill_GATKHC_1445:HG2_Ill_Krunchall_1211:HG2_Ill_manta_248:HG2_Ill_svaba_1109:HG3_Ill_150bpfermikitraw_1135:HG3_Ill_Cortex_199:HG3_Ill_GATKHCSBGrefine_599:HG3_Ill_GATKHC_1513:HG3_Ill_Krunchall_1252:HG3_Ill_manta_189:HG3_Ill_svaba_1144:HG4_Ill_150bpfermikitraw_1140:HG4_Ill_250bpfermikitraw_1188:HG4_Ill_Cortex_185:HG4_Ill_GATKHCSBGrefine_629:HG4_Ill_GATKHC_1417:HG4_Ill_Krunchall_1260:HG4_Ill_manta_218:HG4_Ill_svaba_1102:HG4_PB_SVrefine2Falcon1Dovetail_598;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0729167;ClusterMaxSizeDiff=0.0310881;ClusterMaxEditDist=0.309278;PBcalls=12;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=96;DistBack=28;DistForward=23;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=100;REFWIDENED=1:169523323-169523422;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=306.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:45:1/1:2:25:2:16:1/1:1:33:2:38:1/1:0:50:./.:.:.:.:.:.
chr1	169962742	HG4_Ill_SVrefine2DISCOVARDovetail_689	T	TTCAAGAGGTCTTTCAAGCATCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGATCGCTTGAGGTCAGGAGTTCAAGGCCAGCCTGGCTAACATGGAAACCCTGTCTCTACTAAAAATATAAAAATTAGCTGGATGTGGTGGTGTGCACCTGTAA	20	PASS	ClusterIDs=HG2_PB_pbsv_944:HG3_PB_pbsv_950:HG4_PB_pbsv_954:HG2_PB_PB10Xdip_711:HG3_PB_assemblyticsfalcon_1332:HG2_PB_assemblyticsPBcR_1347:HG4_PB_HySA_1377:HG3_PB_HySA_1409:HG4_PB_SVrefine2Falcon1Dovetail_601:HG4_Ill_SVrefine2DISCOVARDovetail_689:HG3_PB_SVrefine2Falcon1Dovetail_560:HG3_Ill_SVrefine2DISCOVARDovetail_612:HG2_PB_SVrefine2PBcRplusDovetail_652:HG2_PB_SVrefine2PB10Xhap12_774:HG2_PB_SVrefine2Falcon2Bionano_203:HG2_PB_SVrefine2Falcon1plusDovetail_650:HG2_Ill_SVrefine2DISCOVARplusDovetail_762:HG2_Ill_MetaSV_271;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_MetaSV_271:HG2_Ill_SVrefine2DISCOVARplusDovetail_762:HG2_PB_SVrefine2Falcon1plusDovetail_650:HG2_PB_SVrefine2Falcon2Bionano_203:HG2_PB_SVrefine2PB10Xhap12_774:HG2_PB_SVrefine2PBcRplusDovetail_652:HG3_Ill_SVrefine2DISCOVARDovetail_612:HG3_PB_SVrefine2Falcon1Dovetail_560:HG4_Ill_SVrefine2DISCOVARDovetail_689:HG4_PB_SVrefine2Falcon1Dovetail_601;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0658683;ClusterMaxSizeDiff=0.0598802;ClusterMaxEditDist=0.252941;PBcalls=14;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=164;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=266;REFWIDENED=1:169962743-169963008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=307.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:69:1/1:1:27:5:51:1/1:1:13:0:14:1/1:0:19:./.:.:.:.:.:.
chr1	170102061	HG2_Ill_Krunchall_1215	C	CGTCTCTGTTGTCTAGTGCAGTGTCTGGATCATGGGTGATAATAGAAAAACTATTTTTG	20	PASS	ClusterIDs=HG2_PB_HySA_1782:HG4_PB_HySA_1378:HG2_PB_PB10Xdip_712:HG2_Ill_breakscan11_3042:HG4_Ill_svaba_1104:HG4_PB_pbsv_955:HG4_Ill_manta_221:HG4_Ill_Krunchall_1263:HG4_Ill_GATKHC_1422:HG4_Ill_GATKHCSBGrefine_632:HG4_Ill_250bpfermikitraw_1191:HG4_Ill_150bpfermikitraw_1142:HG3_Ill_svaba_1147:HG3_Ill_manta_190:HG3_Ill_Spiral_960:HG3_Ill_Krunchall_1255:HG3_Ill_GATKHC_1518:HG3_Ill_GATKHCSBGrefine_600:HG3_Ill_250bpfermikitraw_1205:HG3_Ill_150bpfermikitraw_1142:HG2_Ill_svaba_1112:HG2_Ill_manta_250:HG2_Ill_SpiralSDKrefine_885:HG2_Ill_Krunchall_1215:HG2_Ill_GATKHC_1454:HG2_Ill_GATKHCSBGrefine_606:HG2_Ill_250bpfermikitraw_1203:HG2_Ill_150bpfermikitraw_1098:HG4_Ill_SVrefine2DISCOVARDovetail_691:HG3_PB_SVrefine2Falcon1Dovetail_561:HG3_Ill_SVrefine2DISCOVARDovetail_615:HG2_PB_SVrefine2PBcRplusDovetail_653:HG2_PB_SVrefine2PB10Xhap12_775:HG2_PB_SVrefine2Falcon2Bionano_204:HG2_PB_SVrefine2Falcon1plusDovetail_651:HG2_Ill_SVrefine2DISCOVARplusDovetail_763:HG2_10X_SVrefine210Xhap12_737:HG2_PB_pbsv_945;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1098:HG2_Ill_250bpfermikitraw_1203:HG2_Ill_GATKHCSBGrefine_606:HG2_Ill_GATKHC_1454:HG2_Ill_Krunchall_1215:HG2_Ill_SpiralSDKrefine_885:HG2_Ill_manta_250:HG2_Ill_svaba_1112:HG3_Ill_150bpfermikitraw_1142:HG3_Ill_250bpfermikitraw_1205:HG3_Ill_GATKHCSBGrefine_600:HG3_Ill_GATKHC_1518:HG3_Ill_Krunchall_1255:HG3_Ill_Spiral_960:HG3_Ill_manta_190:HG3_Ill_svaba_1147:HG4_Ill_150bpfermikitraw_1142:HG4_Ill_250bpfermikitraw_1191:HG4_Ill_GATKHCSBGrefine_632:HG4_Ill_GATKHC_1422:HG4_Ill_Krunchall_1263:HG4_Ill_manta_221:HG4_Ill_svaba_1104;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0991736;ClusterMaxSizeDiff=0.0826446;ClusterMaxEditDist=0.322581;PBcalls=10;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=58;DistBack=-39;DistForward=7;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=1:170102058-170102100;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=308.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:62:./.:0:0:0:0:1/1:0:10:0:16:1/1:0:49:./.:.:.:.:.:.
chr1	170603434	HG2_PB_SVrefine2Falcon1plusDovetail_652	G	GAAAAAAAGTATGAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGGAGCTTGCAGTGAGCGGAGATCGCGCCACTGCACTCCCGCCTGGGCGACAGAACGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_1787:HG4_PB_assemblyticsfalcon_1328:HG2_PB_pbsv_946:HG3_PB_SVrefine2Falcon1Dovetail_562:HG4_PB_SVrefine2Falcon1Dovetail_602:HG4_PB_pbsv_956:HG2_Ill_breakscan11_3043:HG2_PB_SVrefine2Falcon2Bionano_205:HG2_PB_SVrefine2Falcon1plusDovetail_652;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_652:HG2_PB_SVrefine2Falcon2Bionano_205;NumExactMatchSVs=2;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.236337;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=3120;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=1:170603435-170603451;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=309.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:19:1|0:0:14:28:1:1|0:0:5:27:0:0/1:29:10:0/1:6:26:.:.:.
chr1	170612459	HG3_Ill_150bpfermikitraw_1148	T	TAGATCTTTTTATATAGATACTTTTTTTATCTTTTATATAGATAAAAAGTATCTTATATAGATACTTTTTATA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_739:HG2_PB_pbsv_947:HG4_Ill_svaba_1108:HG4_Ill_manta_222:HG4_Ill_Krunchall_1268:HG4_Ill_GATKHC_1427:HG4_Ill_GATKHCSBGrefine_633:HG4_Ill_Cortex_188:HG4_Ill_250bpfermikitraw_1196:HG4_Ill_150bpfermikitraw_1147:HG3_Ill_svaba_1152:HG3_Ill_manta_191:HG3_Ill_Spiral_966:HG3_Ill_Krunchall_1260:HG3_Ill_GATKHC_1524:HG3_Ill_GATKHCSBGrefine_601:HG3_Ill_Cortex_203:HG3_Ill_250bpfermikitraw_1211:HG3_Ill_150bpfermikitraw_1148:HG2_Ill_svaba_1117:HG2_Ill_manta_251:HG2_Ill_SpiralSDKrefine_889:HG2_Ill_Krunchall_1221:HG2_Ill_GATKHC_1460:HG2_Ill_GATKHCSBGrefine_607:HG2_Ill_Cortex_403:HG2_Ill_250bpfermikitraw_1210:HG2_Ill_150bpfermikitraw_1104:HG3_PB_HySA_1413:HG2_Ill_breakscan11_3044:HG3_PB_pbsv_952:HG4_PB_pbsv_957:HG3_PB_SVrefine2Falcon1Dovetail_563:HG3_Ill_SVrefine2DISCOVARDovetail_616:HG2_PB_SVrefine2Falcon1plusDovetail_653;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1104:HG2_Ill_250bpfermikitraw_1210:HG2_Ill_Cortex_403:HG2_Ill_GATKHCSBGrefine_607:HG2_Ill_GATKHC_1460:HG2_Ill_Krunchall_1221:HG2_Ill_SpiralSDKrefine_889:HG2_Ill_manta_251:HG2_Ill_svaba_1117:HG3_Ill_150bpfermikitraw_1148:HG3_Ill_250bpfermikitraw_1211:HG3_Ill_Cortex_203:HG3_Ill_GATKHCSBGrefine_601:HG3_Ill_GATKHC_1524:HG3_Ill_Krunchall_1260:HG3_Ill_Spiral_966:HG3_Ill_manta_191:HG3_Ill_svaba_1152:HG4_Ill_150bpfermikitraw_1147:HG4_Ill_250bpfermikitraw_1196:HG4_Ill_Cortex_188:HG4_Ill_GATKHCSBGrefine_633:HG4_Ill_GATKHC_1427:HG4_Ill_Krunchall_1268:HG4_Ill_manta_222:HG4_Ill_svaba_1108;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0680272;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.241611;PBcalls=6;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=13;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=72;DistBack=-1;DistForward=8;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:170612450-170612464;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=310.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:22:0|1:22:0:1:25:0|1:19:0:0:26:0/1:35:30:./.:.:.:.:.:.
chr1	170651488	HG2_PB_pbsv_948	A	ACCTGCAGTGAGCCGAAGATTCGCGCCACCTGACTCCAGCCCTGGGCGACAGTCGAGACCTCGTCTCAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAGAAAAAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3045:HG3_PB_pbsv_953:HG2_PB_pbsv_948:HG2_PB_HySA_1789:HG2_PB_SVrefine2Falcon1plusDovetail_654:HG3_PB_HySA_1415;NumClusterSVs=6;ExactMatchIDs=HG2_PB_pbsv_948;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0772947;ClusterMaxSizeDiff=0.0676328;ClusterMaxEditDist=0.132701;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=106;DistBack=1;DistForward=3;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:170651489-170651488;PctSeqSimilarity=0.9409;PctSizeSimilarity=0.9811;PctRecOverlap=0.9533;SizeDiff=2;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=95;MatchId=311.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:41:0|1:41:2:0:42:0|1:39:0:0:21:0/1:26:14:./.:.:.:.:.:.
chr1	171785674	HG2_Ill_breakscan11_3046	C	CTCCTTCCCTTCCCTCCCCTCCCCTCCCCTCTCCTCCCCTCCCCTCCCCTCCTGTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCT	20	PASS	ClusterIDs=HG4_PB_pbsv_962:HG4_PB_SVrefine2Falcon1Dovetail_604:HG2_PB_PB10Xdip_728:HG2_PB_HySA_1801:HG2_PB_pbsv_953:HG2_Ill_breakscan11_3046:HG3_PB_SVrefine2Falcon1Dovetail_566:HG2_10X_SVrefine210Xhap12_743:HG3_Ill_GATKHC_1542:HG3_PB_HySA_1430;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_breakscan11_3046;NumExactMatchSVs=1;ClusterMaxShiftDist=0.201058;ClusterMaxSizeDiff=0.201058;ClusterMaxEditDist=0.26455;PBcalls=7;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=84;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=1:171785675-171785716;PctSeqSimilarity=0.9392;PctSizeSimilarity=0.8842;PctRecOverlap=0.8947;SizeDiff=-11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:73:1/1:4:33:0:27:./.:5:18:4:17:./.:2:7:./.:.:.:.:.:.
chr1	171906008	HG4_Ill_svaba_1119	A	AGGTAATGTGGAGACACAAAGTTCAGGCAGCAGGTCTGAGAAGAAAGGCTTGAGAAGGTGG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_1115:HG4_PB_pbsv_963:HG2_PB_pbsv_954:HG3_PB_HySA_1433:HG2_Ill_breakscan11_3047:HG2_PB_HySA_1804:HG4_PB_assemblyticsfalcon_1337:HG4_Ill_svaba_1119:HG4_Ill_manta_223:HG4_Ill_Krunchall_1279:HG4_Ill_GATKHC_1444:HG4_Ill_GATKHCSBGrefine_636:HG4_Ill_Cortex_190:HG4_Ill_250bpfermikitraw_1207:HG4_Ill_150bpfermikitraw_1160:HG3_Ill_svaba_1167:HG3_Ill_manta_194:HG3_Ill_Spiral_980:HG3_Ill_Krunchall_1276:HG3_Ill_GATKHC_1545:HG3_Ill_GATKHCSBGrefine_605:HG3_Ill_Cortex_205:HG3_Ill_250bpfermikitraw_1224:HG2_Ill_svaba_1130:HG2_Ill_manta_254:HG2_Ill_SpiralSDKrefine_900:HG2_Ill_Krunchall_1233:HG2_Ill_GATKHC_1479:HG2_Ill_GATKHCSBGrefine_611:HG2_Ill_Cortex_409:HG2_Ill_250bpfermikitraw_1219;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1115:HG4_PB_assemblyticsfalcon_1337:HG4_Ill_svaba_1119:HG4_Ill_manta_223:HG4_Ill_Krunchall_1279:HG4_Ill_GATKHC_1444:HG4_Ill_GATKHCSBGrefine_636:HG4_Ill_Cortex_190:HG4_Ill_250bpfermikitraw_1207:HG4_Ill_150bpfermikitraw_1160:HG3_Ill_svaba_1167:HG3_Ill_manta_194:HG3_Ill_Spiral_980:HG3_Ill_Krunchall_1276:HG3_Ill_GATKHC_1545:HG3_Ill_GATKHCSBGrefine_605:HG3_Ill_Cortex_205:HG3_Ill_250bpfermikitraw_1224:HG2_Ill_svaba_1130:HG2_Ill_manta_254:HG2_Ill_SpiralSDKrefine_900:HG2_Ill_Krunchall_1233:HG2_Ill_GATKHC_1479:HG2_Ill_GATKHCSBGrefine_611:HG2_Ill_Cortex_409:HG2_Ill_250bpfermikitraw_1219;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0813008;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.227642;PBcalls=5;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=60;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=1:171906007-171906009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=313.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:33:0|1:31:2:0:29:0|1:27:0:0:37:0/1:26:34:./.:.:.:.:.:.
chr1	171952538	HG3_Ill_GATKHCSBGrefine_606	C	CAGTGAGTAATGATGCACCACTCCACTCCAGCCTGGGTGACAGAGTGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAATTATCTATAATCAGCCTCTACTTGGTTTCTTCTCTTCTCT	20	PASS	ClusterIDs=HG2_Ill_manta_255:HG3_PB_pbsv_962:HG2_PB_pbsv_955:HG3_PB_SVrefine2Falcon1Dovetail_567:HG3_PB_HySA_1434:HG3_Ill_Spiral_981:HG3_Ill_GATKHCSBGrefine_606:HG2_Ill_MetaSV_273:HG2_Ill_GATKHCSBGrefine_612;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_612:HG2_Ill_MetaSV_273:HG3_Ill_GATKHCSBGrefine_606:HG3_Ill_Spiral_981;NumExactMatchSVs=4;ClusterMaxShiftDist=0.15444;ClusterMaxSizeDiff=0.146718;ClusterMaxEditDist=0.239382;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=135;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:171952539-171952538;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=314.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:0|1:33:0:2:27:0|1:26:0:0:11:0/1:27:19:./.:.:.:.:.:.
chr1	174333003	HG4_PB_SVrefine2Falcon1Dovetail_609	T	TCAAACCATTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCGCGGACTGCGGACTGCGTGGCGCAATCTCGGCTCACTGCAAGCTCTGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCGCCGGCTGATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCAAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_784:HG2_PB_SVrefine2PBcRplusDovetail_660:HG4_PB_assemblyticsfalcon_1349:HG4_PB_SVrefine2Falcon1Dovetail_609:HG2_PB_pbsv_961:HG2_Ill_breakscan11_3048:HG2_PB_PB10Xdip_738:HG4_PB_HySA_1416;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_609;NumExactMatchSVs=1;ClusterMaxShiftDist=0.1376;ClusterMaxSizeDiff=0.1376;ClusterMaxEditDist=0.2176;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=14056;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:174333004-174333015;PctSeqSimilarity=0.9894;PctSizeSimilarity=0.9969;PctRecOverlap=0.9878;SizeDiff=-1;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=99;MatchId=316.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:43:0|1:30:0:2:39:1|0:0:8:35:0:0/1:25:10:0/1:7:19:.:.:.
chr1	175619853	HG3_PB_SVrefine2Falcon1Dovetail_578	C	CCACCTCACTACTAATCCCTCCTCCCCCACCTCATTATTACCCTTCTCAACCTCATTATTACCCTTCCCCAGATCATTACTACCCCACCCCACCCCACCTCACTAATAACCCCTCTCCCACCTGATTACTAGCCCTCCCATACCTCATTGCTCCTCCTCCCCACCTCATAACTCGTCCTCCCCACCTCCCCCACATCATTACTGCCCCTCCTCGCTTCATTACTACACCTCCCCCACCTCATTACTACCCCTCTCCCACCTCATTACTCCTCCTCCCCACCTCATTACTACCCCATCCCACCTCATTACTCCTCCTTCCCCATCTCATTACTACCTTGCCCCACCTCATTACTACCCCTATCCAACCTCATTACTCCTTCTCCCTCATCTCATTACTACCCCTCCCCCATCCCATTACTACCCCATCCCACCTCATTACTCCTTCTCCTCCATCTCATTA	20	PASS	ClusterIDs=HG2_PB_pbsv_966:HG4_PB_HySA_1440:HG3_PB_pbsv_972:HG2_PB_assemblyticsfalcon_1410:HG2_PB_assemblyticsPBcR_1393:HG4_PB_assemblyticsfalcon_1359:HG2_PB_HySA_1847:HG3_PB_HySA_1449:HG2_PB_SVrefine2Falcon1plusDovetail_662:HG4_Ill_GATKHCSBGrefine_647:HG3_PB_SVrefine2Falcon1Dovetail_578:HG2_PB_SVrefine2PBcRplusDovetail_662:HG2_PB_SVrefine2PB10Xhap12_786:HG2_PB_SVrefine2Falcon2Bionano_212:HG4_PB_SVrefine2Falcon1Dovetail_613:HG3_PB_SVrefine2PBcRDovetail_543:HG2_PB_PB10Xdip_741;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_212:HG2_PB_SVrefine2PB10Xhap12_786:HG2_PB_SVrefine2PBcRplusDovetail_662:HG3_PB_SVrefine2Falcon1Dovetail_578:HG4_Ill_GATKHCSBGrefine_647;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0262009;ClusterMaxSizeDiff=0.0262009;ClusterMaxEditDist=0.172489;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=459;DistBack=26;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:175619854-175619854;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:3:27:2:19:1/1:12:402:18:456:1/1:0:9:1/1:4:72:.:.:.
chr1	178692783	HG2_PB_PB10Xdip_749	AGT	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAGTCTCGCTCTGTCGCCAGGCTGGACTGCAGTGCCAATCTCGCTCACTGCAAGCTCCGCCTCCGTTCACGCCATTCTCCTCCTCAGCCTCCCGAGTGCTACACCCCCCCCCCCGCTAATTTTTGTATTTTAGTAGAGACGGGTTTCACTTGTTAGCCAGGATGTCTCGATTCCTGACTCATGATCACCCCTCGCCTCCAAGTGCTGATTACAGTGAGCCCGCGCCGGCCAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3049:HG2_PB_pbsv_976:HG3_PB_pbsv_981:HG2_PB_assemblyticsfalcon_1427:HG2_PB_SVrefine2Falcon2Bionano_218:HG2_PB_HySA_1873:HG2_PB_SVrefine2Falcon1plusDovetail_668:HG2_PB_SVrefine2PB10Xhap12_792:HG2_PB_PB10Xdip_749:HG4_PB_SVrefine2Falcon1Dovetail_618;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_749:HG2_PB_SVrefine2PB10Xhap12_792;NumExactMatchSVs=2;ClusterMaxShiftDist=0.244582;ClusterMaxSizeDiff=0.241486;ClusterMaxEditDist=0.260062;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=282;DistBack=-15;DistForward=7621;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:178692786-178692782;PctSeqSimilarity=0.8997;PctSizeSimilarity=0.815;PctRecOverlap=0.8213;SizeDiff=-64;StartDistance=2;EndDistance=4;GTMatch=0;TruScore=84;MatchId=319.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:39:0|1:44:2:1:36:./.:24:0:2:4:0/1:30:8:./.:.:.:.:.:.
chr1	179491958	HG2_PB_PB10Xdip_751	A	ATCTAATTGGGGGCGGTGGTCACGCTGTAATCCAGCACTTGGGAGCGAGGCGGTGGATCATGAGGTCAGGAGATCGAGACCATCTGGCTAACAAGTGAAACCGTCTCTACTAAAATACAAAAAATTAGCGGGCGGGTGGCGGGCGCTGTAGTCCAGCTACTGGGAGGCTGAGCAGGAGAATGGCGTGAACCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCACAGTCCGGCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATC	20	PASS	ClusterIDs=HG2_PB_HySA_1879:HG2_PB_SVrefine2PBcRplusDovetail_670:HG2_PB_pbsv_979:HG2_PB_assemblyticsfalcon_1433:HG2_Ill_breakscan11_3051:HG2_PB_PB10Xdip_751:HG2_PB_SVrefine2PB10Xhap12_795:HG2_PB_SVrefine2Falcon1plusDovetail_670:HG2_PB_SVrefine2PBcRplusDovetail_669:HG3_PB_pbsv_983;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_751;NumExactMatchSVs=1;ClusterMaxShiftDist=0.121387;ClusterMaxSizeDiff=0.121387;ClusterMaxEditDist=0.18689;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=324;DistBack=34165;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=1:179491959-179491966;PctSeqSimilarity=0.9531;PctSizeSimilarity=0.9101;PctRecOverlap=0.9104;SizeDiff=-32;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=320.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:23:36:./.:22:12:4:19:./.:34:0:3:2:0/1:38:6:0/1:15:19:.:.:.
chr1	179651096	HG4_PB_SVrefine2Falcon1Dovetail_621	G	GACAGAGTCTCACTCTGTTGCCCAAGCTGGAGTGCAGTGGTGCAATTTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGTGATTCTCCCACCTCAGCCTCCCGAGTAGCTGAGATTACAGGCATGTGCCACTACGTCCAGCTAATTTTTTAAGTTTTTGGTAGAGACAGGGTTTCACCACCTTGGCTAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCTGCCTCCCAGAAGTGCTGGGATTACAGGCGTGAGCCATGGCACCTGGCCCAGTGTGTTTTTCTTCTCTAGAGGTTTGACTTGGGTCTTTTTTATATCTTCCATTTTTTTCCACATTATAGTCAGGTTTTTCTACCTGACTATAAAGAGTGTTTAAAGAGCACTTTATTCAAGAAGGTAGAAAAACCTGACTATAATGTGGAAAAAAATGGAAGATATAAAAAAGACCCAAGTCAAACCTCTAGAGAAGAAAAACACACTGGGCCAGGTGCCATGGCTCACGCCTGTAATCCCAGCACTTTTGGGAGGCAGAGGTGGGCGGATCACCTGAGGTCAGGAGTTCCAGACCAGCCTAGCCAAGGTGGTGAAACCCTGTCTCTACCAAAAATTTAAAAAATTAGCTGGACGTAGTGGCACATGCCTGTAATCTCAGCTACTCGGGAGGCTGAGGTGGGAGAATCGCTTGAACTTGGGAGGCGGAGGTTGCAGTGAGCCGAAATTGCACCACTGCACTCCAGCTTGGGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_672:HG4_PB_pbsv_991:HG3_PB_pbsv_985:HG2_PB_pbsv_981:HG4_PB_assemblyticsfalcon_1382:HG3_PB_assemblyticsfalcon_1399:HG3_Ill_GATKHCSBGrefine_618:HG2_PB_PB10Xdip_771:HG4_PB_SVrefine2PBcRDovetail_528:HG4_PB_SVrefine2Falcon1Dovetail_621:HG2_PB_SVrefine2Falcon2Bionano_219:HG3_PB_SVrefine2Falcon1Dovetail_586:HG3_PB_SVrefine2PBcRDovetail_549:HG2_PB_SVrefine2PB10Xhap12_798:HG4_Ill_GATKHCSBGrefine_653:HG4_Ill_MetaSV_294:HG2_PB_HySA_1880:HG4_PB_HySA_1459:HG2_Ill_MetaSV_277:HG3_Ill_MetaSV_262:HG2_PB_assemblyticsfalcon_1435;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_219:HG4_PB_SVrefine2Falcon1Dovetail_621:HG4_PB_SVrefine2PBcRDovetail_528;NumExactMatchSVs=3;ClusterMaxShiftDist=0.268592;ClusterMaxSizeDiff=0.267148;ClusterMaxEditDist=0.33454;PBcalls=16;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=756;DistBack=8;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=1:179651097-179651113;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:27:0:30:./.:0:1:0:9:./.:0:5:./.:8:77:.:.:.
chr1	180828203	HG4_Ill_manta_232	G	GTAAATTATTACCAGAAGAGAAAGGTTTTAGGTGAAAAGAAAACCATTCCAT	20	PASS	ClusterIDs=HG2_PB_pbsv_985:HG2_PB_PB10Xdip_775:HG2_Ill_breakscan11_3052:HG4_PB_pbsv_996:HG4_Ill_svaba_1170:HG4_Ill_manta_232:HG4_Ill_Krunchall_1348:HG4_Ill_GATKHC_1516:HG4_Ill_GATKHCSBGrefine_658:HG4_Ill_FB_866:HG4_Ill_Cortex_205:HG4_Ill_250bpfermikitraw_1273:HG4_Ill_150bpfermikitraw_1222:HG3_Ill_svaba_1209:HG3_Ill_scalpel_988:HG3_Ill_manta_204:HG3_Ill_Spiral_1023:HG3_Ill_Krunchall_1333:HG3_Ill_GATKHC_1592:HG3_Ill_GATKHCSBGrefine_622:HG3_Ill_FB_889:HG3_Ill_Cortex_222:HG3_Ill_250bpfermikitraw_1280:HG3_Ill_150bpfermikitraw_1210:HG2_PB_assemblyticsfalcon_1440:HG2_Ill_svaba_1176:HG2_Ill_scalpel_913:HG2_Ill_manta_273:HG2_Ill_SpiralSDKrefine_944:HG2_Ill_Krunchall_1291:HG2_Ill_GATKHC_1551:HG2_Ill_GATKHCSBGrefine_629:HG2_Ill_FB_892:HG2_Ill_Cortex_430:HG2_Ill_250bpfermikitraw_1285:HG2_Ill_150bpfermikitraw_1176:HG3_PB_pbsv_989:HG4_PB_HySA_1469;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1176:HG2_Ill_250bpfermikitraw_1285:HG2_Ill_Cortex_430:HG2_Ill_FB_892:HG2_Ill_GATKHCSBGrefine_629:HG2_Ill_GATKHC_1551:HG2_Ill_Krunchall_1291:HG2_Ill_SpiralSDKrefine_944:HG2_Ill_manta_273:HG2_Ill_scalpel_913:HG2_Ill_svaba_1176:HG2_PB_assemblyticsfalcon_1440:HG3_Ill_150bpfermikitraw_1210:HG3_Ill_250bpfermikitraw_1280:HG3_Ill_Cortex_222:HG3_Ill_FB_889:HG3_Ill_GATKHCSBGrefine_622:HG3_Ill_GATKHC_1592:HG3_Ill_Krunchall_1333:HG3_Ill_Spiral_1023:HG3_Ill_manta_204:HG3_Ill_scalpel_988:HG3_Ill_svaba_1209:HG4_Ill_150bpfermikitraw_1222:HG4_Ill_250bpfermikitraw_1273:HG4_Ill_Cortex_205:HG4_Ill_FB_866:HG4_Ill_GATKHCSBGrefine_658:HG4_Ill_GATKHC_1516:HG4_Ill_Krunchall_1348:HG4_Ill_manta_232:HG4_Ill_svaba_1170;NumExactMatchSVs=32;ClusterMaxShiftDist=0.11215;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.27027;PBcalls=6;Illcalls=32;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=31;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=-1;DistForward=29343;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:180828202-180828205;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:66:1/1:2:35:2:22:1/1:0:25:1:29:1/1:0:70:./.:.:.:.:.:.
chr1	180857549	HG2_10X_SVrefine210Xhap12_774	T	TTAAAATTGAGATAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAATAAAATAAAATAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3053:HG2_PB_pbsv_986:HG4_PB_pbsv_997:HG2_PB_assemblyticsfalcon_1441:HG4_PB_SVrefine2PBcRDovetail_532:HG4_Ill_manta_233:HG4_Ill_MetaSV_297:HG4_Ill_GATKHCSBGrefine_659:HG2_PB_SVrefine2Falcon2Bionano_222:HG2_Ill_MetaSV_280:HG2_10X_SVrefine210Xhap12_774:HG2_PB_SVrefine2Falcon1plusDovetail_676:HG4_PB_SVrefine2Falcon1Dovetail_625:HG2_Ill_GATKHCSBGrefine_630;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_774:HG2_Ill_MetaSV_280:HG2_PB_SVrefine2Falcon2Bionano_222:HG4_Ill_GATKHCSBGrefine_659:HG4_Ill_MetaSV_297:HG4_Ill_manta_233;NumExactMatchSVs=6;ClusterMaxShiftDist=0.11838;ClusterMaxSizeDiff=0.11838;ClusterMaxEditDist=0.168224;PBcalls=7;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=321;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:180857550-180857564;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=323.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:./.:24:0:8:22:1|0:0:14:18:0:0/1:32:18:0/1:6:32:.:.:.
chr1	181047410	HG2_Ill_GATKHCSBGrefine_631	T	TAAAAAAAAAAAAAAAAACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_998:HG4_PB_HySA_1470:HG3_PB_pbsv_990:HG4_PB_assemblyticsfalcon_1393:HG2_PB_assemblyticsfalcon_1443:HG3_PB_HySA_1480:HG3_PB_SVrefine2PBcRDovetail_553:HG4_PB_SVrefine2PBcRDovetail_533:HG2_PB_pbsv_987:HG4_PB_SVrefine2Falcon1Dovetail_626:HG3_PB_SVrefine2Falcon1Dovetail_589:HG4_Ill_MetaSV_298:HG4_Ill_GATKHCSBGrefine_661:HG3_Ill_MetaSV_266:HG3_Ill_GATKHCSBGrefine_624:HG2_Ill_MetaSV_281:HG2_Ill_GATKHCSBGrefine_631:HG2_10X_SVrefine210Xhap12_775:HG2_PB_SVrefine2Falcon1plusDovetail_677:HG2_PB_SVrefine2Falcon2Bionano_223:HG2_PB_SVrefine2PB10Xhap12_803:HG2_PB_HySA_1890:HG2_PB_PB10Xdip_777;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_775:HG2_Ill_GATKHCSBGrefine_631:HG2_Ill_MetaSV_281:HG3_Ill_GATKHCSBGrefine_624:HG3_Ill_MetaSV_266:HG4_Ill_GATKHCSBGrefine_661:HG4_Ill_MetaSV_298;NumExactMatchSVs=7;ClusterMaxShiftDist=0.16129;ClusterMaxSizeDiff=0.16129;ClusterMaxEditDist=0.249211;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=317;DistBack=134824;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:181047411-181047425;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:63:1/1:3:32:0:22:1/1:0:10:0:5:1/1:0:17:1/1:2:61:.:.:.
chr1	182038126	HG2_PB_assemblyticsfalcon_1448	AGGAAGGAGAGAGGA	GGAAGGAAGGAAAAGAAAAAGAAAAGAAAAAGAAAGAGAAAGAAAGAGGCAAGACAATACAGAAAAGAAAGAAGGAAGGAAAAGAAAGAGAAAGAGGAAAGAGAGAAGGAAGGAAGGAAAGAAGAAAAGAAGACGAGGGGAGCGGGGAGAGGAGGTGGGAGGGAGGGGGAAGAGGAGGGGAGGGGGAGGAGGGGACGGGAGTGGAAAAGAAGGGGGAGGGGAGAAGGGGAGGGGGGAGGGGAGAGAGAAGGGGAGAGGGAGGGGTGAGGGGAGGCGGGGGGGGAGGGGGAGGCGGGAGGGGAGGGGAGGAGAGGGAGGAG	20	PASS	ClusterIDs=HG3_PB_pbsv_995:HG2_PB_SVrefine2PB10Xhap12_807:HG2_PB_pbsv_990:HG2_PB_assemblyticsfalcon_1448:HG4_PB_assemblyticsfalcon_1397:HG2_PB_PB10Xdip_780:HG2_PB_SVrefine2Falcon1plusDovetail_680:HG3_PB_SVrefine2PBcRDovetail_556:HG4_PB_SVrefine2Falcon1Dovetail_629:HG4_Ill_MetaSV_300:HG4_Ill_SVrefine2DISCOVARDovetail_726:HG2_10X_SVrefine210Xhap12_778:HG3_PB_SVrefine2Falcon1Dovetail_592:HG4_PB_SVrefine2PBcRDovetail_536:HG2_PB_SVrefine2PB10Xhap12_806:HG2_PB_SVrefine2Falcon2Bionano_226:HG3_PB_HySA_1486:HG2_PB_HySA_1894:HG4_PB_HySA_1475;NumClusterSVs=19;ExactMatchIDs=HG2_PB_assemblyticsfalcon_1448;NumExactMatchSVs=1;ClusterMaxShiftDist=0.301824;ClusterMaxSizeDiff=0.301824;ClusterMaxEditDist=0.395189;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=305;DistBack=58718;DistForward=-15;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:182038136-182038133;PctSeqSimilarity=0.9595;PctSizeSimilarity=0.8815;PctRecOverlap=0.9193;SizeDiff=-41;StartDistance=0;EndDistance=14;GTMatch=0;TruScore=92;MatchId=325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:1/1:1:33:0:25:./.:7:19:3:11:0/1:13:12:./.:2:19:.:.:.
chr1	182274306	HG2_PB_HySA_1898	T	TAGATAATGAAAAATGTTTATCCTCTCCCTCTCGCTCCCACCTCCCCTCCCCTACCCCAGCTCCCCTCTCCGTCTCCGTCTCGCTCTCCCTCCTCTGCACGGTCTCCCTGCGTGACTCCAGGAGACAAGCTGGGCTGTACTGCTGCGATCTCGGCTCACTGCAACCTCCCTGCCTGATTTTCTGCCTCAGCCTGGCGAGTGCCTGCGATTACAGGGGCGCGCGCGCCAATCGCTGCTGTGTTTCGTTTTTTTTTGGTGGAGACGGGATTTTGCTGTGTTGGCCGCGCTGGTTTCAGCTCCTAACCGCGAGTGATCCGCAGCCTCGGCTGCCGCAGGTGCCATGATTGCAGACGAGAGTCTGTTCTCAGTGCTCAATGGTGCAGGCTGGAGTGTCATGGCGTGATCTCGGCTCGCTACAACCTCCACTTCCCAGCCGCTGCCTTGAGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCCGGCCTCCACCCCGCTGGGAGTGAGGAGCGTCTCTGCTTGAACCCCATCGTGTTTGCATATGAGGAGACCCCTCTGCCTGGCTGCCCAGTGCTGGAAAGTGAAGGAGCGTCTCTGCTCGGCCGCCAATCCAATTAAGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCAATCTCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGACCGCATCTTGGCTGAGATGTGGGAGCCACCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAAATCCCCCGTTTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTGTCGCGGCCGGCAGCCACCCGTCCGGGAGGGAAGTGGGGGGGTCAGCCCCCCGCCCGGTCAGCCGCCCGTCCGGGTTGAGGGGCTCCTTCTGGTCCAGCCGGCCCTACTGGGAAGTGAGGAGCCCTCTGCCCGGTCAGTTGCCCCGTCCAGGAGGGAGGTGGTGGGGTCAGCCCCCCTGCCAGCCAGCCGCCCCGTCGGAGGGAGGTGAGGGGGATCAGCCCCGCGCTGGCCAGCCACCCCGTCCGGGAGGTGAGGGCGCCTCTGCCCGGCGCCCCTAAGGGAAGTGAGGAGCCCCTCTGCCGGCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGGCCTGCCGGCCGCTCCGTTTGGGAGGTGAGGGGCGCCTCTGGCCGAGGCGCCCTACTGGGAAGTGAGAACCCTCTGCCCGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCAGCCAGCCGCCCAGTCCGGGAGGAGGTGGGGGGTCAGCCCCCGCGCCTGGTCAGCCGCCACGTCCGGGAGTAAGGGGCGCCTCTGCCTCGGCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCAGCCGCGCCCCGTCCGGGAGGGAGCGGGGGGGGTCGGCCAGCCGCTCCGTCGGGTGGGAGAGGGGGGGTCAGCCCCCCGCCCGGCCGGTCGCGCCGTCCGGGAGGTGAGGGACGCCTCTGCCTGGCTGCCCCTACTGGGAAGTGGGACCCTCTGCCCCGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGTCAGCCCCCCGCTCGGCCAGCCGCCCTATCCAGGAGGTGAGGGCGCCTCTGCCCGGCCGCCCCTACTGGCAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCGTCCGGAGGGTGTTGTGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGAAGTGAGGAGCCCCTCTGCCTGCCCACGACCCCGTCTGGGAGGTTGCCCAGCGGCTCATGTGGGATGGGCCATGATGACAATGTGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATGGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTACTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAAGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCCTTAAGAGTCATCACTACTCCCTAATCTCAAGTACCAGGGACACAACACTGCGAAGGCCGCAGGTTTCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACTCTTTCCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAATATAAATAAATAAATAATAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAAACAATAATGCTTCTGAAGCCCTAGCTCATGTCTGAGACAAGTACAGGCTCTCACTGACATCAGCAGTTACAATTAAAAAAAAAAAAAAAAAAAAAGGAAGGCCCTAAGACAACAGGCTTCATGCCTCACATTTATAAAGAATATCAAGTCCTCCAGACAGCTAAGTTGCTAAGTTTGTGATGATACGAAAAATTAGGGAAAGATTTTCCTATTTTCTGATCAATCACTGAGGGAAGCTATGTGGTTAAGTACATAAGGAAAAAAACTAGACTATTTCTAGTTTCTGGAAGCGGCATTATCTGTAACCTTGTTTTGATCGTCTTAATAACAATCCTTTAAAATGTTAATGTGAGAAATGACTAATAAACAATTATTAAAAATGAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_1898:HG3_PB_HySA_1492:HG4_PB_pbsv_1003:HG3_PB_pbsv_997:HG2_PB_pbsv_992:HG2_PB_PB10Xdip_782:HG2_PB_assemblyticsfalcon_1453:HG4_PB_assemblyticsfalcon_1402:HG4_PB_HySA_1481:HG3_PB_SVrefine2Falcon1Dovetail_594:HG2_PB_SVrefine2Falcon1plusDovetail_683:HG2_PB_SVrefine2PB10Xhap12_810:HG4_PB_SVrefine2Falcon1Dovetail_631:HG3_PB_SVrefine2PBcRDovetail_559:HG2_PB_HySA_1899;NumClusterSVs=15;ExactMatchIDs=HG2_PB_HySA_1898;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0597798;ClusterMaxSizeDiff=0.0597798;ClusterMaxEditDist=0.179907;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=2807;DistBack=-11;DistForward=8;DistMin=-11;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:182274307-182274307;PctSeqSimilarity=0.9642;PctSizeSimilarity=0.9894;PctRecOverlap=0.9894;SizeDiff=-30;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=98;MatchId=326.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:52:0|1:20:1:0:38:./.:32:0:7:4:0/1:29:7:0/1:104:102:.:2977:.
chr1	183856340	HG2_Ill_GATKHC_1578	T	TCCTGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTCCCTCCCTCCCTCCCTCTCTTTCTTTGTTTCTCTCTTTCTCTCTC	20	PASS	ClusterIDs=HG3_PB_pbsv_1004:HG2_PB_HySA_1906:HG4_PB_HySA_1489:HG3_PB_SVrefine2Falcon1Dovetail_601:HG2_PB_SVrefine2PB10Xhap12_816:HG3_Ill_SVrefine2DISCOVARDovetail_676:HG2_Ill_SVrefine2DISCOVARplusDovetail_815:HG2_Ill_GATKHC_1578:HG2_Ill_GATKHCSBGrefine_637:HG2_PB_SVrefine2Falcon2Bionano_233:HG4_Ill_SVrefine2DISCOVARDovetail_733:HG4_Ill_GATKHC_1536:HG4_Ill_GATKHCSBGrefine_667:HG3_PB_SVrefine2PBcRDovetail_562:HG4_PB_SVrefine2Falcon1Dovetail_634:HG4_PB_SVrefine2PBcRDovetail_543:HG4_Ill_MetaSV_302:HG2_10X_SVrefine210Xhap12_785:HG2_PB_PB10Xdip_788:HG2_Ill_breakscan11_3055:HG3_PB_HySA_1507:HG4_PB_assemblyticsfalcon_1412:HG2_PB_assemblyticsfalcon_1466:HG2_PB_SVrefine2Falcon1plusDovetail_686;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_637:HG2_Ill_GATKHC_1578:HG2_Ill_SVrefine2DISCOVARplusDovetail_815:HG3_Ill_SVrefine2DISCOVARDovetail_676;NumExactMatchSVs=4;ClusterMaxShiftDist=0.164794;ClusterMaxSizeDiff=0.157303;ClusterMaxEditDist=0.207143;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=134;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:183856341-183856341;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:64:1/1:3:14:3:25:1/1:1:16:0:23:1/1:0:11:./.:.:.:.:.:.
chr1	186743196	HG4_Ill_SVrefine2DISCOVARDovetail_739	C	CTATATATATACTTTATATATACTGTATGTGTATATATAAAGTATATATATAGTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3056:HG4_PB_pbsv_1016:HG2_PB_pbsv_1004:HG3_PB_HySA_1523:HG3_PB_pbsv_1012:HG2_PB_PB10Xdip_789:HG4_PB_HySA_1495:HG4_PB_SVrefine2PBcRDovetail_549:HG4_PB_SVrefine2Falcon1Dovetail_638:HG4_Ill_scalpel_895:HG4_Ill_manta_236:HG4_Ill_SVrefine2DISCOVARDovetail_739:HG4_Ill_Krunchall_1377:HG4_Ill_GATKHC_1548:HG4_Ill_GATKHCSBGrefine_673:HG4_Ill_250bpfermikitraw_1298:HG4_Ill_150bpfermikitraw_1250:HG3_PB_SVrefine2PBcRDovetail_568:HG3_PB_SVrefine2Falcon1Dovetail_605:HG3_Ill_scalpel_1018:HG3_Ill_manta_208:HG3_Ill_Spiral_1061:HG3_Ill_SVrefine2DISCOVARDovetail_687:HG3_Ill_Krunchall_1370:HG3_Ill_GATKHC_1639:HG3_Ill_GATKHCSBGrefine_635:HG3_Ill_250bpfermikitraw_1316:HG3_Ill_150bpfermikitraw_1250:HG2_PB_SVrefine2PBcRplusDovetail_673:HG2_PB_SVrefine2PB10Xhap12_822:HG2_PB_SVrefine2Falcon2Bionano_235:HG2_PB_SVrefine2Falcon1plusDovetail_691:HG2_Ill_scalpel_939:HG2_Ill_manta_278:HG2_Ill_SpiralSDKrefine_970:HG2_Ill_SVrefine2DISCOVARplusDovetail_820:HG2_Ill_Krunchall_1330:HG2_Ill_GATKHC_1593:HG2_Ill_GATKHCSBGrefine_641:HG2_Ill_250bpfermikitraw_1322:HG2_Ill_150bpfermikitraw_1215:HG2_10X_SVrefine210Xhap12_797;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_797:HG2_Ill_150bpfermikitraw_1215:HG2_Ill_250bpfermikitraw_1322:HG2_Ill_GATKHCSBGrefine_641:HG2_Ill_GATKHC_1593:HG2_Ill_Krunchall_1330:HG2_Ill_SVrefine2DISCOVARplusDovetail_820:HG2_Ill_SpiralSDKrefine_970:HG2_Ill_manta_278:HG2_Ill_scalpel_939:HG2_PB_SVrefine2Falcon1plusDovetail_691:HG2_PB_SVrefine2Falcon2Bionano_235:HG2_PB_SVrefine2PB10Xhap12_822:HG2_PB_SVrefine2PBcRplusDovetail_673:HG3_Ill_150bpfermikitraw_1250:HG3_Ill_250bpfermikitraw_1316:HG3_Ill_GATKHCSBGrefine_635:HG3_Ill_GATKHC_1639:HG3_Ill_Krunchall_1370:HG3_Ill_SVrefine2DISCOVARDovetail_687:HG3_Ill_Spiral_1061:HG3_Ill_manta_208:HG3_Ill_scalpel_1018:HG3_PB_SVrefine2Falcon1Dovetail_605:HG3_PB_SVrefine2PBcRDovetail_568:HG4_Ill_150bpfermikitraw_1250:HG4_Ill_250bpfermikitraw_1298:HG4_Ill_GATKHCSBGrefine_673:HG4_Ill_GATKHC_1548:HG4_Ill_Krunchall_1377:HG4_Ill_SVrefine2DISCOVARDovetail_739:HG4_Ill_manta_236:HG4_Ill_scalpel_895:HG4_PB_SVrefine2Falcon1Dovetail_638:HG4_PB_SVrefine2PBcRDovetail_549;NumExactMatchSVs=35;ClusterMaxShiftDist=0.106195;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.258621;PBcalls=14;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=54;DistBack=36148;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=1:186743197-186743204;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:49:1/1:3:14:1:14:1/1:2:24:0:18:./.:5:62:./.:.:.:.:.:.
chr1	188438207	HG2_Ill_MetaSV_288	T	TTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTCAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTCTATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_559:HG3_PB_pbsv_1019:HG4_PB_pbsv_1027:HG2_PB_PB10Xdip_808:HG2_PB_HySA_1948:HG3_PB_HySA_1550:HG4_Ill_MetaSV_309:HG4_Ill_GATKHCSBGrefine_682:HG3_Ill_manta_209:HG3_Ill_MetaSV_278:HG3_Ill_GATKHCSBGrefine_674:HG2_Ill_MetaSV_288:HG2_Ill_GATKHCSBGrefine_647:HG2_PB_pbsv_1011:HG2_Ill_breakscan11_3057:HG4_PB_HySA_1520:HG2_PB_assemblyticsPBcR_1485:HG2_PB_assemblyticsfalcon_1500:HG4_PB_assemblyticsfalcon_1448:HG2_10X_SVrefine210Xhap12_802:HG2_PB_SVrefine2PBcRplusDovetail_677:HG2_PB_SVrefine2PB10Xhap12_827:HG2_PB_SVrefine2Falcon1plusDovetail_698:HG4_PB_SVrefine2Falcon1Dovetail_651:HG3_PB_SVrefine2Falcon1Dovetail_613:HG2_PB_SVrefine2Falcon2Bionano_238;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_647:HG2_Ill_MetaSV_288:HG3_Ill_GATKHCSBGrefine_674:HG3_Ill_MetaSV_278:HG3_Ill_manta_209:HG4_Ill_GATKHCSBGrefine_682:HG4_Ill_MetaSV_309;NumExactMatchSVs=7;ClusterMaxShiftDist=0.148867;ClusterMaxSizeDiff=0.148867;ClusterMaxEditDist=0.190789;PBcalls=17;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=304;DistBack=-6;DistForward=5;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:188438201-188438213;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=330.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:1/1:1:5:1:12:1/1:0:6:0:7:1/1:0:41:1/1:2:52:.:.:.
chr1	189247027	HG4_PB_SVrefine2PBcRDovetail_562	T	TAAAAAATATTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAACTACAAAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_HySA_1535:HG2_PB_assemblyticsfalcon_1510:HG2_PB_pbsv_1015:HG4_PB_assemblyticsfalcon_1460:HG2_PB_HySA_1956:HG3_PB_SVrefine2Falcon1Dovetail_617:HG4_PB_SVrefine2PBcRDovetail_562:HG2_PB_SVrefine2Falcon1plusDovetail_701:HG4_PB_pbsv_1032;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_562;NumExactMatchSVs=1;ClusterMaxShiftDist=0.109718;ClusterMaxSizeDiff=0.109718;ClusterMaxEditDist=0.173252;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=317;DistBack=-2;DistForward=0;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:189247028-189247039;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:25:0|1:38:2:1:22:./.:1:4:19:0:0/1:27:17:0/1:6:28:.:.:.
chr1	190002852	HG2_Ill_GATKHCSBGrefine_654	T	TTTATAAGATGTATGTAGTGGGTTGTATCTCTTTAGCCTATAAAAGAGGGATATTTCTTTCTGTCTTTGCAATCTTTTAGTGGATTGCCTATGATGCACATCACATTCTGTTTTAATGC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_807:HG2_PB_pbsv_1019:HG3_PB_pbsv_1023:HG2_PB_HySA_1966:HG3_PB_HySA_1560:HG3_Ill_svaba_1266:HG3_Ill_manta_212:HG3_Ill_Spiral_1085:HG3_Ill_MetaSV_280:HG3_Ill_GATKHCSBGrefine_677:HG2_Ill_svaba_1241:HG2_Ill_manta_286:HG2_Ill_SpiralSDKrefine_1000:HG2_Ill_MetaSV_291:HG2_Ill_GATKHCSBGrefine_654:HG2_PB_PB10Xdip_810:HG2_PB_assemblyticsfalcon_1514:HG3_PB_SVrefine2PBcRDovetail_577:HG3_Ill_SVrefine2DISCOVARDovetail_699:HG2_PB_SVrefine2PB10Xhap12_831:HG2_PB_SVrefine2Falcon1plusDovetail_702;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_654:HG2_Ill_MetaSV_291:HG2_Ill_SpiralSDKrefine_1000:HG2_Ill_manta_286:HG2_Ill_svaba_1241:HG3_Ill_GATKHCSBGrefine_677:HG3_Ill_MetaSV_280:HG3_Ill_Spiral_1085:HG3_Ill_manta_212:HG3_Ill_svaba_1266;NumExactMatchSVs=10;ClusterMaxShiftDist=0.163793;ClusterMaxSizeDiff=0.163793;ClusterMaxEditDist=0.232759;PBcalls=9;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=118;DistBack=41487;DistForward=13529;DistMin=13529;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=1:190002849-190002856;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=332.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:45:0|1:26:0:2:44:0|1:29:0:0:14:0/1:31:18:./.:.:.:.:.:.
chr1	190874444	HG2_PB_SVrefine2Falcon1plusDovetail_704	G	GCTGAAAACTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_pbsv_1038:HG4_PB_HySA_1546:HG3_PB_pbsv_1026:HG4_PB_assemblyticsfalcon_1471:HG2_PB_assemblyticsfalcon_1521:HG3_PB_HySA_1568:HG4_PB_SVrefine2Falcon1Dovetail_655:HG4_Ill_MetaSV_313:HG4_Ill_GATKHCSBGrefine_693:HG3_PB_SVrefine2PBcRDovetail_580:HG3_PB_SVrefine2Falcon1Dovetail_621:HG3_Ill_MetaSV_282:HG3_Ill_GATKHCSBGrefine_680:HG2_PB_SVrefine2Falcon1plusDovetail_704:HG2_Ill_manta_289:HG2_Ill_MetaSV_293:HG2_Ill_GATKHCSBGrefine_657:HG2_10X_SVrefine210Xhap12_810:HG3_Ill_manta_215:HG4_PB_SVrefine2PBcRDovetail_564:HG2_Ill_breakscan11_3059:HG2_PB_pbsv_1022;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_810:HG2_Ill_GATKHCSBGrefine_657:HG2_Ill_MetaSV_293:HG2_Ill_manta_289:HG2_PB_SVrefine2Falcon1plusDovetail_704:HG3_Ill_GATKHCSBGrefine_680:HG3_Ill_MetaSV_282:HG3_PB_SVrefine2Falcon1Dovetail_621:HG3_PB_SVrefine2PBcRDovetail_580:HG4_Ill_GATKHCSBGrefine_693:HG4_Ill_MetaSV_313;NumExactMatchSVs=11;ClusterMaxShiftDist=0.228374;ClusterMaxSizeDiff=0.221453;ClusterMaxEditDist=0.259516;PBcalls=12;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=305;DistBack=12671;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:190874445-190874457;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=333.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:28:0|1:35:0:2:36:0|1:33:0:0:7:0/1:31:16:0/1:6:35:.:.:.
chr1	191088595	HG2_PB_SVrefine2PBcRplusDovetail_682	A	AGGTACAGTGGCTCATGCCTGTAGCTTCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAACCCGGTTAACATGGTGAAACTTCGTCTCTACTAAAAATACCAAAATTAATTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_838:HG3_PB_HySA_1571:HG4_PB_pbsv_1040:HG2_PB_pbsv_1024:HG3_PB_pbsv_1028:HG3_Ill_250bpfermikitraw_1351:HG4_PB_HySA_1549:HG2_PB_HySA_1974:HG2_PB_PB10Xdip_815:HG4_PB_SVrefine2PBcRDovetail_566:HG4_PB_SVrefine2Falcon1Dovetail_657:HG4_Ill_SVrefine2DISCOVARDovetail_760:HG3_PB_SVrefine2PBcRDovetail_582:HG3_PB_SVrefine2Falcon1Dovetail_623:HG3_Ill_SVrefine2DISCOVARDovetail_706:HG2_PB_SVrefine2PBcRplusDovetail_682:HG2_PB_SVrefine2PB10Xhap12_834:HG2_PB_SVrefine2Falcon2Bionano_241:HG2_PB_SVrefine2Falcon1plusDovetail_706;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_838:HG4_PB_SVrefine2PBcRDovetail_566:HG4_PB_SVrefine2Falcon1Dovetail_657:HG4_Ill_SVrefine2DISCOVARDovetail_760:HG3_PB_SVrefine2PBcRDovetail_582:HG3_PB_SVrefine2Falcon1Dovetail_623:HG3_Ill_SVrefine2DISCOVARDovetail_706:HG2_PB_SVrefine2PBcRplusDovetail_682:HG2_PB_SVrefine2PB10Xhap12_834:HG2_PB_SVrefine2Falcon2Bionano_241:HG2_PB_SVrefine2Falcon1plusDovetail_706;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0782918;ClusterMaxSizeDiff=0.0782918;ClusterMaxEditDist=0.222222;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=135;DistBack=9588;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=342;REFWIDENED=1:191088596-191088937;PctSeqSimilarity=0.9694;PctSizeSimilarity=1;PctRecOverlap=0.6741;SizeDiff=0;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=88;MatchId=334.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:77:1/1:1:47:4:22:./.:2:2:1:1:./.:24:3:./.:.:.:.:.:.
chr1	191580768	HG2_Ill_MetaSV_294	T	TTAAAATAAAAGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAATAAAAAATAAAATAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_684:HG2_PB_pbsv_1027:HG2_PB_HySA_1978:HG4_Ill_manta_249:HG4_Ill_MetaSV_314:HG4_Ill_GATKHCSBGrefine_698:HG3_Ill_MetaSV_284:HG3_Ill_GATKHCSBGrefine_685:HG2_Ill_MetaSV_294:HG2_Ill_GATKHCSBGrefine_662:HG4_PB_HySA_1554:HG3_PB_HySA_1575:HG4_PB_pbsv_1042:HG2_PB_PB10Xdip_816:HG2_Ill_breakscan11_3060:HG4_PB_assemblyticsfalcon_1476:HG2_PB_assemblyticsfalcon_1528:HG2_PB_assemblyticsPBcR_1514:HG2_PB_SVrefine2PB10Xhap12_836:HG4_PB_SVrefine2Falcon1Dovetail_658:HG4_PB_SVrefine2PBcRDovetail_568:HG3_PB_SVrefine2Falcon1Dovetail_624:HG2_PB_SVrefine2Falcon2Bionano_243:HG2_PB_SVrefine2Falcon1plusDovetail_707;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_662:HG2_Ill_MetaSV_294:HG3_Ill_GATKHCSBGrefine_685:HG3_Ill_MetaSV_284:HG4_Ill_GATKHCSBGrefine_698:HG4_Ill_MetaSV_314:HG4_Ill_manta_249;NumExactMatchSVs=7;ClusterMaxShiftDist=0.194969;ClusterMaxSizeDiff=0.194969;ClusterMaxEditDist=0.290221;PBcalls=16;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=-13;DistForward=3;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=1:191580761-191580781;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:34:0|1:23:3:0:37:1|0:0:5:28:0:0/1:33:18:0/1:6:42:.:.:.
chr1	191817425	HG2_Ill_GATKHCSBGrefine_664	T	TATAAAATATCACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAAAATAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3061:HG3_PB_pbsv_1032:HG2_PB_pbsv_1028:HG3_PB_SVrefine2Falcon1Dovetail_625:HG2_PB_HySA_1984:HG3_PB_HySA_1580:HG2_Ill_MetaSV_295:HG2_Ill_GATKHCSBGrefine_664:HG3_Ill_MetaSV_285;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_664:HG2_Ill_MetaSV_295;NumExactMatchSVs=2;ClusterMaxShiftDist=0.140523;ClusterMaxSizeDiff=0.137255;ClusterMaxEditDist=0.190789;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=19708;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:191817426-191817437;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=336.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:0|1:34:4:1:30:0|1:30:0:0:10:0/1:18:13:0/1:13:32:.:.:.
chr1	192525806	HG2_Ill_GATKHC_1660	G	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAAAGAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_1031:HG3_Ill_Krunchall_1417:HG4_Ill_GATKHCSBGrefine_701:HG3_Ill_GATKHCSBGrefine_690:HG2_Ill_GATKHC_1660:HG2_Ill_GATKHCSBGrefine_668:HG3_Ill_250bpfermikitraw_1364:HG2_Ill_250bpfermikitraw_1381:HG4_Ill_Krunchall_1443;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_668:HG2_Ill_GATKHC_1660:HG3_Ill_GATKHCSBGrefine_690:HG4_Ill_GATKHCSBGrefine_701;NumExactMatchSVs=4;ClusterMaxShiftDist=0.16129;ClusterMaxSizeDiff=0.16129;ClusterMaxEditDist=0.258065;PBcalls=1;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=5;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:192525805-192525808;PctSeqSimilarity=0.8429;PctSizeSimilarity=0.7179;PctRecOverlap=0.7215;SizeDiff=-22;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=76;MatchId=337.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:./.:0:12:0:4:1/1:0:14:0:10:0/1:6:34:./.:.:.:.:.:.
chr1	193413286	HG4_PB_pbsv_1052	T	TAAAAATTATAGTAATAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCAAGCCACTTTGGAGGCCGAGGCGGCGGATCACGAGGTCAGGAGATCTTAGACCAATCCCGGCAAAACGGTGAAACCCCGGCTCTACTGAAAATAGCAAAAAAATTAGCCGGGGCGTGAGTGGGCGGGCGCACTGTAGTCCAGCTACCTTGGGAGCTGAGGCAGGGAGAATGGCGTAACCCGGGAGCGGAGCTTTGCAGTGAAAGCCGAGATTCCCCGCCACTGCACTCCAGCCTGGGCGACAGAGGCGAGACTTCGCGTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_572:HG3_PB_pbsv_1041:HG2_PB_pbsv_1038:HG3_PB_HySA_1598:HG4_Ill_MetaSV_318:HG3_Ill_GATKHCSBGrefine_695:HG4_PB_pbsv_1052:HG4_PB_HySA_1577:HG2_Ill_breakscan11_3062:HG2_PB_HySA_2001:HG2_PB_assemblyticsfalcon_1546:HG3_PB_SVrefine2Falcon1Dovetail_631:HG3_PB_SVrefine2PBcRDovetail_587:HG2_PB_SVrefine2Falcon1plusDovetail_712;NumClusterSVs=14;ExactMatchIDs=HG4_PB_pbsv_1052;NumExactMatchSVs=1;ClusterMaxShiftDist=0.167442;ClusterMaxSizeDiff=0.167442;ClusterMaxEditDist=0.234177;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=340;DistBack=-16;DistForward=53611;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=1:193413283-193413303;PctSeqSimilarity=0.9536;PctSizeSimilarity=0.9588;PctRecOverlap=0.9589;SizeDiff=14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=338.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:32:0|1:32:1:2:35:./.:18:0:0:1:0/1:29:10:0/1:4:9:.:.:.
chr1	194068135	HG2_Ill_GATKHCSBGrefine_675	A	AATATTTAAATATATAAAATATATATAAATATATAAAAATATATAAATATAAATATAAATATATAAAAATATATATAAATATATAAATATATATTTATATAATTATATATTTATATAAATATATAAATATATATATAAATATATAAATAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_665:HG4_PB_pbsv_1054:HG2_Ill_SVrefine2DISCOVARplusDovetail_856:HG2_Ill_breakscan11_3063:HG3_PB_pbsv_1045:HG4_Ill_scalpel_961:HG4_Ill_GATKHC_1644:HG4_Ill_GATKHCSBGrefine_708:HG3_Ill_GATKHCSBGrefine_701:HG2_PB_SVrefine2Falcon2Bionano_251:HG2_Ill_GATKHC_1683:HG2_Ill_GATKHCSBGrefine_675:HG3_PB_SVrefine2Falcon1Dovetail_636;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_675:HG2_Ill_GATKHC_1683:HG2_PB_SVrefine2Falcon2Bionano_251:HG3_Ill_GATKHCSBGrefine_701:HG4_Ill_GATKHCSBGrefine_708:HG4_Ill_GATKHC_1644:HG4_Ill_scalpel_961;NumExactMatchSVs=7;ClusterMaxShiftDist=0.112676;ClusterMaxSizeDiff=0.112676;ClusterMaxEditDist=0.306122;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=149;DistBack=-308;DistForward=5;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=491;REFWIDENED=1:194068028-194068518;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:29:./.:22:31:6:1:./.:0:8:1:5:1/1:0:24:./.:.:.:.:.:.
chr1	194445279	HG2_Ill_GATKHCSBGrefine_676	G	GTAAAAATCTTTTAACTTGCTTCCTACTGTGGTGTTGTGTTGAATTTGTACCCTTTATTTAAAGAACAAGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_850:HG2_PB_HySA_2021:HG4_PB_HySA_1596:HG2_PB_PB10Xdip_832:HG4_PB_SVrefine2PBcRDovetail_576:HG4_PB_pbsv_1058:HG4_PB_SVrefine2Falcon1Dovetail_669:HG4_Ill_svaba_1272:HG4_Ill_manta_254:HG4_Ill_SVrefine2DISCOVARDovetail_781:HG4_Ill_MetaSV_321:HG4_Ill_Krunchall_1468:HG4_Ill_GATKHC_1648:HG4_Ill_GATKHCSBGrefine_709:HG4_Ill_250bpfermikitraw_1385:HG4_Ill_150bpfermikitraw_1329:HG3_PB_SVrefine2Falcon1Dovetail_639:HG2_PB_SVrefine2PBcRplusDovetail_695:HG2_PB_SVrefine2Falcon1plusDovetail_718:HG2_Ill_svaba_1280:HG2_Ill_manta_298:HG2_Ill_Krunchall_1407:HG2_Ill_GATKHC_1688:HG2_Ill_GATKHCSBGrefine_676:HG2_Ill_250bpfermikitraw_1405:HG2_10X_SVrefine210Xhap12_818;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_818:HG2_Ill_250bpfermikitraw_1405:HG2_Ill_GATKHCSBGrefine_676:HG2_Ill_GATKHC_1688:HG2_Ill_Krunchall_1407:HG2_Ill_manta_298:HG2_Ill_svaba_1280:HG2_PB_SVrefine2Falcon1plusDovetail_718:HG2_PB_SVrefine2PBcRplusDovetail_695:HG3_PB_SVrefine2Falcon1Dovetail_639:HG4_Ill_150bpfermikitraw_1329:HG4_Ill_250bpfermikitraw_1385:HG4_Ill_GATKHCSBGrefine_709:HG4_Ill_GATKHC_1648:HG4_Ill_Krunchall_1468:HG4_Ill_MetaSV_321:HG4_Ill_SVrefine2DISCOVARDovetail_781:HG4_Ill_manta_254:HG4_Ill_svaba_1272:HG4_PB_SVrefine2Falcon1Dovetail_669:HG4_PB_SVrefine2PBcRDovetail_576;NumExactMatchSVs=21;ClusterMaxShiftDist=0.084507;ClusterMaxSizeDiff=0.084507;ClusterMaxEditDist=0.211268;PBcalls=10;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=70;DistBack=58585;DistForward=50;DistMin=50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=1:194445280-194445348;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=340.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:30:1|0:5:25:21:5:1|0:1:19:6:0:0/1:20:18:./.:.:.:.:.:.
chr1	194595947	HG2_PB_HySA_2023	T	TAAAAGAGACAAAGAACTACTTGGGAGGCTGAGCAGGAGAATGGCGTGAACCGGAGGCGGGCTTGCAGTGAGCGAGATCCCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3064:HG2_PB_pbsv_1050:HG4_PB_pbsv_1061:HG4_PB_HySA_1603:HG2_PB_HySA_2023:HG4_Ill_GATKHCSBGrefine_718:HG4_PB_SVrefine2PBcRDovetail_579:HG2_PB_SVrefine2Falcon1plusDovetail_722:HG2_PB_assemblyticsfalcon_1563;NumClusterSVs=9;ExactMatchIDs=HG2_PB_HySA_2023;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0939597;ClusterMaxSizeDiff=0.0939597;ClusterMaxEditDist=0.156863;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=141;DistBack=17878;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:194595948-194595960;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.9338;PctRecOverlap=0.9338;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=93;MatchId=341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:0|1:28:3:0:26:./.:1:13:25:0:0/1:22:5:./.:.:.:.:.:.
chr1	194638693	HG2_PB_SVrefine2Falcon2Bionano_255	A	ATATATATATATATACACACACACATATATGTGTATATATACACACACACATATGTATATATATACACACACATATATGTATATATACACACATATACATATATGTGTGTGTGTATATATATACATGTGTGTGTATATATACACATATATGTGTGTGTATATATATATATATATGAGAAATTCTTTGGTAATTTGAGAAGATCCATTGTTAGTGAAATATACCTAAGACAGTTGTAGATGAGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_723:HG2_PB_pbsv_1051:HG4_PB_assemblyticsfalcon_1507:HG3_PB_pbsv_1051:HG4_PB_SVrefine2Falcon1Dovetail_673:HG2_PB_HySA_2026:HG4_Ill_MetaSV_323:HG4_PB_pbsv_1062:HG3_PB_SVrefine2PBcRDovetail_597:HG3_Ill_SVrefine2DISCOVARDovetail_727:HG3_PB_SVrefine2Falcon1Dovetail_644:HG2_PB_PB10Xdip_841:HG4_PB_HySA_1604:HG3_Ill_MetaSV_292:HG2_PB_SVrefine2PBcRplusDovetail_699:HG2_PB_SVrefine2Falcon2Bionano_255:HG2_PB_SVrefine2PB10Xhap12_854:HG4_Ill_SVrefine2DISCOVARDovetail_783:HG2_Ill_SVrefine2DISCOVARplusDovetail_860:HG2_10X_SVrefine210Xhap12_820:HG4_PB_SVrefine2PBcRDovetail_580:HG3_PB_HySA_1618;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_255:HG2_PB_SVrefine2PBcRplusDovetail_699:HG3_Ill_MetaSV_292;NumExactMatchSVs=3;ClusterMaxShiftDist=0.167969;ClusterMaxSizeDiff=0.150289;ClusterMaxEditDist=0.303142;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=243;DistBack=11821;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=1:194638694-194638728;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9918;PctRecOverlap=0.9918;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=342.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:106:1/1:2:47:1:23:1/1:1:37:1:32:1/1:0:25:./.:.:.:.:.:.
chr1	194675125	HG2_PB_SVrefine2Falcon2Bionano_256	T	TAAAATTGAGTATATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_1619:HG2_PB_pbsv_1052:HG4_PB_assemblyticsfalcon_1508:HG3_PB_pbsv_1052:HG2_PB_HySA_2029:HG2_PB_assemblyticsfalcon_1565:HG4_PB_SVrefine2Falcon1Dovetail_674:HG2_PB_SVrefine2Falcon2Bionano_256:HG2_PB_SVrefine2Falcon1plusDovetail_724:HG2_Ill_breakscan11_3065;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_256;NumExactMatchSVs=1;ClusterMaxShiftDist=0.117117;ClusterMaxSizeDiff=0.117117;ClusterMaxEditDist=0.183183;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=335;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:194675126-194675140;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.9941;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=343.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:35:1|0:1:31:36:1:0|1:23:0:0:12:0/1:20:7:0/1:7:22:.:.:.
chr1	196153531	HG2_PB_SVrefine2PB10Xhap12_857	A	AATATTTTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCAAGTGATCCACCCGCCTCGGTCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG4_PB_pbsv_1066:HG4_PB_assemblyticsfalcon_1519:HG2_PB_pbsv_1058:HG3_PB_pbsv_1058:HG2_PB_PB10Xdip_845:HG2_PB_HySA_2041:HG4_PB_SVrefine2Falcon1Dovetail_676:HG3_PB_SVrefine2PBcRDovetail_599:HG4_PB_SVrefine2PBcRDovetail_582:HG3_PB_SVrefine2Falcon1Dovetail_647:HG2_PB_SVrefine2PBcRplusDovetail_702:HG2_PB_SVrefine2PB10Xhap12_857:HG2_PB_SVrefine2Falcon2Bionano_259:HG2_PB_SVrefine2Falcon1plusDovetail_727:HG4_PB_HySA_1613:HG3_PB_HySA_1628;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_259:HG2_PB_SVrefine2PB10Xhap12_857:HG2_PB_SVrefine2PBcRplusDovetail_702:HG3_PB_SVrefine2Falcon1Dovetail_647;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0582242;ClusterMaxSizeDiff=0.0494905;ClusterMaxEditDist=0.184173;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=336;DistBack=9026;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=1:196153532-196153547;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=344.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:2:25:0:19:./.:0:7:0:2:1/1:0:11:1/1:2:38:.:.:.
chr1	196406141	HG2_Ill_SVrefine2DISCOVARplusDovetail_866	C	CATATATTTATATACATAAATATATATCATATATAAATATATATTTATATACATAAATATATATCTATATATAAATATATATTTATATACATAAATATATTTATATATAAATATATATTTTTATATATATTTATATATAAATATATATTTTTATATATATTTATGTATATATTTATATATAAATATATATTTATATATTTATATATATTTATATATATACATAAATATATATTTATATATATTTATATATATACATAAATATATATTTATATATAAATATATATTTATATATTTATATATATTTATATACATAAATATATATTTAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_649:HG2_PB_HySA_2046:HG3_PB_pbsv_1060:HG3_PB_SVrefine2PBcRDovetail_601:HG2_PB_PB10Xdip_846:HG2_PB_HySA_2044:HG2_PB_HySA_2045:HG2_Ill_breakscan11_3066:HG4_PB_HySA_1616:HG4_PB_pbsv_1068:HG4_PB_SVrefine2PBcRDovetail_584:HG4_PB_SVrefine2Falcon1Dovetail_678:HG2_PB_SVrefine2Falcon1plusDovetail_729:HG2_PB_pbsv_1060:HG3_Ill_SVrefine2DISCOVARDovetail_732:HG2_PB_SVrefine2PB10Xhap12_859:HG2_PB_SVrefine2PBcRplusDovetail_704:HG4_Ill_SVrefine2DISCOVARDovetail_787:HG2_PB_SVrefine2Falcon2Bionano_261:HG2_Ill_SVrefine2DISCOVARplusDovetail_866;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_866:HG2_PB_SVrefine2Falcon2Bionano_261:HG4_Ill_SVrefine2DISCOVARDovetail_787:HG4_PB_SVrefine2PBcRDovetail_584;NumExactMatchSVs=4;ClusterMaxShiftDist=0.192733;ClusterMaxSizeDiff=0.192733;ClusterMaxEditDist=0.334842;PBcalls=16;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=325;DistBack=25864;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=105;REFWIDENED=1:196406142-196406246;PctSeqSimilarity=0.9776;PctSizeSimilarity=0.9559;PctRecOverlap=0.7742;SizeDiff=-15;StartDistance=-69;EndDistance=-69;GTMatch=1;TruScore=90;MatchId=345.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:73:1/1:2:28:3:34:./.:0:4:0:0:0/1:2:16:1/1:2:30:.:.:.
chr1	197011858	HG2_PB_SVrefine2Falcon2Bionano_263	G	GAAGAATCTCTTGACCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_847:HG4_PB_pbsv_1069:HG2_PB_pbsv_1061:HG2_PB_assemblyticsfalcon_1584:HG2_PB_assemblyticsPBcR_1568:HG2_Ill_breakscan11_3067:HG3_PB_pbsv_1063:HG4_PB_SVrefine2PBcRDovetail_586:HG2_PB_SVrefine2PBcRplusDovetail_707:HG2_PB_SVrefine2PB10Xhap12_861:HG2_PB_SVrefine2Falcon2Bionano_263:HG2_PB_SVrefine2Falcon1plusDovetail_732:HG3_PB_SVrefine2Falcon1Dovetail_651:HG3_Ill_GATKHCSBGrefine_712:HG3_Ill_MetaSV_296:HG3_PB_SVrefine2PBcRDovetail_604:HG4_PB_HySA_1621:HG2_PB_HySA_2051:HG3_PB_HySA_1637;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_732:HG2_PB_SVrefine2Falcon2Bionano_263:HG2_PB_SVrefine2PB10Xhap12_861:HG2_PB_SVrefine2PBcRplusDovetail_707;NumExactMatchSVs=4;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.232558;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=288;DistBack=162;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:197011859-197011871;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9931;PctRecOverlap=0.9931;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:80:1/1:5:29:0:32:./.:0:6:1:7:1/1:0:8:./.:.:.:.:.:.
chr1	198243294	HG3_PB_pbsv_1068	T	TTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGACGGAGTCTCGCTCTGTCCGCCCAGGCTGGAGTGCAAGTGGCGGCGAATCTCGGCTACCTTGCAAGCTCCGCCTCCCGGGTTCACGAGCAATTCTCCTGCGCTCAGCCTCCCCGAGTCTGGGACCTACAGGGCGCCCCGCACCACGGCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACGTGTTACCAGGATGGTCTCGATCTCCTGAACCTCTAGCGTGAATCCGCCCGCCCCTCGGCCTCCAAAGTGTCTAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3068:HG2_PB_pbsv_1066:HG3_PB_pbsv_1068:HG2_PB_assemblyticsfalcon_1595:HG4_PB_assemblyticsfalcon_1536:HG2_PB_SVrefine2Falcon1plusDovetail_736:HG2_PB_SVrefine2Falcon2Bionano_267:HG4_PB_SVrefine2Falcon1Dovetail_684:HG3_PB_SVrefine2Falcon1Dovetail_655:HG2_PB_HySA_2060;NumClusterSVs=10;ExactMatchIDs=HG3_PB_pbsv_1068;NumExactMatchSVs=1;ClusterMaxShiftDist=0.123746;ClusterMaxSizeDiff=0.123746;ClusterMaxEditDist=0.183946;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=-13070;DistForward=6;DistMin=-13070;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:198243295-198243295;PctSeqSimilarity=0.944;PctSizeSimilarity=0.9583;PctRecOverlap=0.9553;SizeDiff=13;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=95;MatchId=347.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:44:0|1:37:1:0:32:1|0:0:7:21:0:0/1:22:10:0/1:7:15:.:.:.
chr1	198366568	HG2_PB_SVrefine2Falcon2Bionano_268	T	TCCTCCCACTCTTCCTCCCTCCCTCCCTTGCTTCCTACCTTCCTTCCCTCCCTCCCTCCCTCCCTCCTTTCCTTCCTACCTTCCTTCTTTCCCTCCCTTCCTTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCTTTCCTTCCTACCTTCCTTCTTTCCTTCCCTTCCTTCCTTCCCTCCCTCTCTCCTTCCCTCCCTCCTTTCCTTCCTTCCTTCTTTCCTTCCTACCTTCCTTCTTTCCCTCCCTCCCTCCCTTCCTATCTACCTTCCCTCTCTCCTTCCCTCCCTCCCTTCCTTCCTACCTTCCTTCTTTTCCTCCCTCCTGCCCTACCTTCCCTCCCTCCTTCCCTCCGTTCTTTCCTTCCTACCTTCCTTCTTTCCCTCCCTACCTTCCTAGCTTCCTTCTTTCCCTCCCTCCCTCCCTTCCTTCATTCCCTCCCTTCCTTCCTTCATTCCCTC	20	PASS	ClusterIDs=HG3_PB_pbsv_1069:HG3_PB_HySA_1648:HG4_PB_pbsv_1075:HG2_10X_SVrefine210Xhap12_832:HG2_PB_HySA_2061:HG3_PB_HySA_1647:HG2_PB_PB10Xdip_856:HG2_Ill_breakscan11_3069:HG2_PB_pbsv_1067:HG4_PB_SVrefine2Falcon1Dovetail_685:HG4_PB_SVrefine2PBcRDovetail_592:HG3_PB_SVrefine2Falcon1Dovetail_656:HG2_PB_SVrefine2PB10Xhap12_868:HG2_PB_SVrefine2Falcon2Bionano_268:HG2_PB_SVrefine2Falcon1plusDovetail_737:HG3_PB_SVrefine2PBcRDovetail_608;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_737:HG2_PB_SVrefine2Falcon2Bionano_268:HG2_PB_SVrefine2PB10Xhap12_868;NumExactMatchSVs=3;ClusterMaxShiftDist=0.194131;ClusterMaxSizeDiff=0.194131;ClusterMaxEditDist=0.301391;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=469;DistBack=2567;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=118;REFWIDENED=1:198366569-198366686;PctSeqSimilarity=0.9883;PctSizeSimilarity=0.9874;PctRecOverlap=0.9116;SizeDiff=-6;StartDistance=-39;EndDistance=-39;GTMatch=0;TruScore=96;MatchId=348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:17:0:20:./.:1:8:0:14:1/1:0:14:0/1:6:33:.:.:.
chr1	198925741	HG2_Ill_250bpfermikitraw_1446	G	GTATATTGAAAATATGCTATTGTGAGCAGTATTCACAATAGCATATTTTCAATATACTATACTATAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_835:HG4_PB_pbsv_1079:HG2_PB_pbsv_1071:HG2_PB_PB10Xdip_860:HG2_Ill_breakscan11_3070:HG4_Ill_svaba_1307:HG2_PB_HySA_2063:HG4_Ill_manta_258:HG4_Ill_Krunchall_1509:HG4_Ill_GATKHC_1693:HG4_Ill_GATKHCSBGrefine_730:HG4_Ill_250bpfermikitraw_1427:HG4_Ill_150bpfermikitraw_1370:HG3_Ill_svaba_1335:HG3_Ill_manta_228:HG3_Ill_Spiral_1148:HG3_Ill_Krunchall_1480:HG3_Ill_GATKHC_1763:HG3_Ill_GATKHCSBGrefine_718:HG3_Ill_250bpfermikitraw_1427:HG3_Ill_150bpfermikitraw_1352:HG2_Ill_svaba_1312:HG2_Ill_manta_303:HG2_Ill_SpiralSDKrefine_1053:HG2_Ill_Krunchall_1450:HG2_Ill_GATKHC_1738:HG2_Ill_GATKHCSBGrefine_694:HG2_Ill_250bpfermikitraw_1446:HG2_Ill_150bpfermikitraw_1333:HG3_PB_pbsv_1071:HG4_PB_SVrefine2PBcRDovetail_594:HG4_Ill_SVrefine2DISCOVARDovetail_802:HG3_PB_SVrefine2PBcRDovetail_609:HG3_Ill_SVrefine2DISCOVARDovetail_750:HG2_PB_SVrefine2PBcRplusDovetail_714:HG2_PB_SVrefine2PB10Xhap12_871:HG2_PB_SVrefine2Falcon2Bionano_272:HG2_PB_SVrefine2Falcon1plusDovetail_741:HG2_Ill_SVrefine2DISCOVARplusDovetail_880;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1333:HG2_Ill_250bpfermikitraw_1446:HG2_Ill_GATKHCSBGrefine_694:HG2_Ill_GATKHC_1738:HG2_Ill_Krunchall_1450:HG2_Ill_SpiralSDKrefine_1053:HG2_Ill_manta_303:HG2_Ill_svaba_1312:HG3_Ill_150bpfermikitraw_1352:HG3_Ill_250bpfermikitraw_1427:HG3_Ill_GATKHCSBGrefine_718:HG3_Ill_GATKHC_1763:HG3_Ill_Krunchall_1480:HG3_Ill_Spiral_1148:HG3_Ill_manta_228:HG3_Ill_svaba_1335:HG4_Ill_150bpfermikitraw_1370:HG4_Ill_250bpfermikitraw_1427:HG4_Ill_GATKHCSBGrefine_730:HG4_Ill_GATKHC_1693:HG4_Ill_Krunchall_1509:HG4_Ill_manta_258:HG4_Ill_svaba_1307;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0875912;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.241135;PBcalls=11;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=66;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=1:198925726-198925746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:1/1:2:49:2:11:1/1:1:27:0:34:1/1:4:61:./.:.:.:.:.:.
chr1	199883640	HG3_PB_SVrefine2Falcon1Dovetail_662	C	CAGGGTGTGTTGAAAAAAAGTGAAAAAAATCTATCAATCGTTTAGGGTGTGTTAAAAAAACTGAAACAATGTATCAATCGTTT	20	PASS	ClusterIDs=HG3_PB_HySA_1658:HG2_PB_PB10Xdip_865:HG4_PB_HySA_1639:HG2_PB_pbsv_1075:HG2_PB_HySA_2074:HG3_PB_pbsv_1076:HG4_Ill_svaba_1313:HG3_Ill_svaba_1341:HG3_Ill_manta_229:HG3_Ill_Spiral_1156:HG3_Ill_Krunchall_1490:HG3_Ill_GATKHC_1772:HG3_Ill_GATKHCSBGrefine_720:HG3_Ill_250bpfermikitraw_1435:HG3_Ill_150bpfermikitraw_1361:HG2_PB_SVrefine2PBcRplusDovetail_717:HG2_Ill_svaba_1319:HG4_Ill_manta_260:HG4_Ill_Krunchall_1515:HG4_Ill_GATKHC_1700:HG4_Ill_GATKHCSBGrefine_738:HG4_Ill_250bpfermikitraw_1432:HG3_PB_SVrefine2Falcon1Dovetail_662:HG2_Ill_manta_304:HG2_Ill_SpiralSDKrefine_1055:HG2_Ill_SVrefine2DISCOVARplusDovetail_883:HG2_Ill_Krunchall_1461:HG2_Ill_GATKHC_1748:HG2_Ill_GATKHCSBGrefine_700:HG2_Ill_250bpfermikitraw_1455:HG2_Ill_150bpfermikitraw_1339:HG2_10X_SVrefine210Xhap12_840:HG2_PB_SVrefine2Falcon2Bionano_276;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_840:HG2_Ill_150bpfermikitraw_1339:HG2_Ill_250bpfermikitraw_1455:HG2_Ill_GATKHCSBGrefine_700:HG2_Ill_GATKHC_1748:HG2_Ill_Krunchall_1461:HG2_Ill_SVrefine2DISCOVARplusDovetail_883:HG2_Ill_SpiralSDKrefine_1055:HG2_Ill_manta_304:HG3_PB_SVrefine2Falcon1Dovetail_662:HG4_Ill_250bpfermikitraw_1432:HG4_Ill_GATKHCSBGrefine_738:HG4_Ill_GATKHC_1700:HG4_Ill_Krunchall_1515:HG4_Ill_manta_260;NumExactMatchSVs=15;ClusterMaxShiftDist=0.177215;ClusterMaxSizeDiff=0.138365;ClusterMaxEditDist=0.265823;PBcalls=9;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=82;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=37;REFWIDENED=1:199883641-199883677;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=351.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:26:0|1:26:0:3:26:0|1:30:0:1:34:0/1:24:29:./.:.:.:.:.:.
chr1	202641907	HG3_PB_pbsv_1088	G	GATAGGGGGAGAGAGAAGGGGTGAGGGAGGCGAGGGGGGAGAGAGGGGAGGGGGAGAAAGAGTAGGGAGTAATGTGAGGACCGAGAGGGGAGGAGGGGGGAGAGAGTGTGGAGAGGGTGAGGGAGGGGGGAGGAGGGGAGAAGAGGGGAGTAGGGGGAGAGAGAGGGAGGGAGTGAGGGGGAGAGAGGAGGGGGAGGGAGGGGGCAGGAGAGGGCGGAGGAGGGGCGTGAAGAGAGGGGGAGGGAGGGGGAGGAGGGGGGGAGAGATTAGGAGTAGCGAGCATGGTGGTGGGAAGAGAGATGAGGGGATGGGTAGAGGTAGGGAGAGAGAGGGGAGGTAGATGGAGGGAGAGACGAGGTGAAGGGGTGGGAGATAGAGAGAGGGGGAGGGAGGGAGGGAGGAGAAAGAAGATGAGACCTAGAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_752:HG2_PB_HySA_2116:HG2_PB_SVrefine2Falcon2Bionano_282:HG2_PB_SVrefine2PBcRplusDovetail_726:HG3_PB_SVrefine2Falcon1Dovetail_669:HG2_PB_HySA_2115:HG3_PB_HySA_1677:HG3_PB_pbsv_1088:HG2_PB_PB10Xdip_889:HG4_PB_HySA_1654:HG3_PB_SVrefine2PBcRDovetail_616:HG4_PB_assemblyticsfalcon_1574:HG2_PB_SVrefine2PBcRplusDovetail_725:HG4_PB_SVrefine2PBcRDovetail_602:HG2_PB_SVrefine2PB10Xhap12_887:HG4_PB_SVrefine2Falcon1Dovetail_699:HG4_PB_pbsv_1097:HG2_PB_assemblyticsfalcon_1633;NumClusterSVs=18;ExactMatchIDs=HG3_PB_pbsv_1088;NumExactMatchSVs=1;ClusterMaxShiftDist=0.356021;ClusterMaxSizeDiff=0.356021;ClusterMaxEditDist=0.371353;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=422;DistBack=12;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:202641908-202641908;PctSeqSimilarity=0.8659;PctSizeSimilarity=0.9814;PctRecOverlap=0.9606;SizeDiff=-8;StartDistance=13;EndDistance=13;GTMatch=1;TruScore=93;MatchId=355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:51:1/1:5:26:4:22:./.:0:2:8:0:0/1:5:3:0/1:2:11:.:.:.
chr1	202758669	HG3_PB_SVrefine2PBcRDovetail_618	G	GGAAAGGCAAAGGGAAAAGGAAAGGAAAAAGGAAAAGGGGAAAGGAAAGGAGGAAAGGGAAGGGGAAAGGGGAAGGGAAGAGAAAGAAAAAGAGAAAGGGAAGGGAAGAGAAATGGGGGAGGTGAGGGGAGGGGAAGGGAAGAGGGGAAGGGGAGGGAAGGCAGGGGAGGGGACGAGAAGGGAAGAGGGGAAGGGGAAAGGGGAAGGGAGAGGGAAGGGAGAAGGGATGGGAGGGGAAGGGGGGAGGGGAGGCGGAAGGTAGAGGAGGAGGAAAGGAAGGCAAGGGAGAGGGTAATGGGAAAGTTAAGGAAAGGGGAAGGGAAGGTGAGAGGGAGGGGAGGGGAAGGGGTAATGAGAAGGTTAGGGGAAGGGAAAGGGAAAGGGAAGGGGAGAGGGAGGGGAGGGGAAGGGGGAGGGTAGGGGAAGGGGAAGGGAAGGGGAGGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_754:HG2_PB_HySA_2118:HG3_PB_HySA_1680:HG4_PB_pbsv_1099:HG2_PB_PB10Xdip_890:HG3_PB_HySA_1679:HG4_Ill_MetaSV_336:HG3_Ill_MetaSV_302:HG2_PB_HySA_2117:HG4_PB_HySA_1655:HG2_PB_pbsv_1092:HG4_PB_SVrefine2PBcRDovetail_604:HG2_Ill_MetaSV_313:HG3_PB_SVrefine2PBcRDovetail_618:HG3_Ill_SVrefine2DISCOVARDovetail_762:HG2_PB_SVrefine2PBcRplusDovetail_728:HG2_PB_SVrefine2PB10Xhap12_889:HG2_PB_SVrefine2Falcon2Bionano_284:HG4_Ill_SVrefine2DISCOVARDovetail_817:HG2_10X_SVrefine210Xhap12_855:HG3_PB_SVrefine2Falcon1Dovetail_671:HG4_PB_SVrefine2Falcon1Dovetail_701;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_284:HG2_PB_SVrefine2PB10Xhap12_889:HG2_PB_SVrefine2PBcRplusDovetail_728:HG3_Ill_SVrefine2DISCOVARDovetail_762:HG3_PB_SVrefine2PBcRDovetail_618:HG4_PB_SVrefine2PBcRDovetail_604;NumExactMatchSVs=6;ClusterMaxShiftDist=0.10197;ClusterMaxSizeDiff=0.0996524;ClusterMaxEditDist=0.267442;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=443;DistBack=49121;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=85;REFWIDENED=1:202758670-202758754;PctSeqSimilarity=0.9821;PctSizeSimilarity=0.9977;PctRecOverlap=0.8652;SizeDiff=-1;StartDistance=-59;EndDistance=-59;GTMatch=0;TruScore=94;MatchId=356.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:./.:0:4:2:13:1/1:0:12:0:7:1/1:0:10:1/1:2:42:.:.:.
chr1	203469009	HG2_PB_SVrefine2Falcon1plusDovetail_755	T	TCACCTCCACCACCCACCTCTACCACCACCCACCTCCACCACCTACCTCCACCACTCACCTCCACCACCACCCACCTCCACCTCTACCACCCACCTCCACCATCACCCACCTCTACCACCACCCACTTCCACACCTACCACCCACCTACCACCGCCACCACCACCACCTACCTCCACCACCACCACCTCCACCTCTACCACCCACCTCCACCTCCAGCACCCACCCCACCCCTACCACCACCCACCACCACCACCACCACCCACCTACACCACCTACCACTACCACCACCACCTACCTCCATCACCTACCAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_605:HG2_PB_PB10Xdip_892:HG2_PB_HySA_2126:HG2_PB_pbsv_1094:HG3_PB_pbsv_1092:HG3_PB_HySA_1684:HG4_PB_pbsv_1101:HG4_PB_SVrefine2Falcon1Dovetail_702:HG3_PB_SVrefine2Falcon1Dovetail_672:HG3_PB_SVrefine2PBcRDovetail_619:HG2_PB_SVrefine2PB10Xhap12_890:HG2_PB_SVrefine2Falcon1plusDovetail_755:HG2_PB_SVrefine2PBcRplusDovetail_729:HG2_PB_SVrefine2Falcon2Bionano_285;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_755:HG2_PB_SVrefine2PB10Xhap12_890:HG3_PB_SVrefine2PBcRDovetail_619;NumExactMatchSVs=3;ClusterMaxShiftDist=0.135177;ClusterMaxSizeDiff=0.132104;ClusterMaxEditDist=0.219136;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=311;DistBack=17299;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=658;REFWIDENED=1:203469010-203469667;PctSeqSimilarity=0.9556;PctSizeSimilarity=0.9041;PctRecOverlap=0.4;SizeDiff=-33;StartDistance=-190;EndDistance=-190;GTMatch=0;TruScore=75;MatchId=357.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:32:1/1:1:16:2:15:1/1:12:324:10:339:./.:0:2:1/1:1:25:.:.:.
chr1	203808943	HG2_Ill_SVrefine2DISCOVARplusDovetail_898	G	GTTTTTTGAGACAGAGTCTCACTCTGTCACCCAGACTGGAGTGCAGTAGCGCTATCTCAGCTCACCCCAACCTCCACCTCCCGGGTTCAAACGATTCTCCTCTCTCAGCCTCCAGAGTAGCTGAGATTACAGGCATGTGCCACCACACCCGGCTAATTTTTGTGTTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTCACCTCAGGTGATCTGCCCGCCTCCGGCCTCCCAAAGTGTTGGGATTATAGGCGTGAGCCACCACCCCTGGCATGTTTTAAGCTTTCCAGAGTACTCTAGGGAATCTATGATTGACATAAATCTGTTCTGTGGAGAAAAAAATTTTAACTTTTTTTTTTTTTTAAATACAGAGTCTCTCTCTGTGGCCCAGGCTGGAGTACAGTGGTGCAATCTTGGCTCACTGAAACCTCTGCCTCCCGGGTTCAAGTAATTCTCCTGCCTCAGCCTCCCTAGTAGCTAGAATTACAAGCACATGCCACCATTCCCGGCTAATTTTTGTATTTTTAGTAGAAACGAGGTTTTACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTTATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGATGTATGCCAACATGCGCAACAAACGTGTATTTAACTTGTAAAAAGTTTCTGTTCAACTTTTGATTTTTTAAAATCTTTCTTTTTAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_893:HG3_PB_pbsv_1095:HG2_PB_pbsv_1097:HG2_PB_HySA_2131:HG2_PB_PB10Xdip_894:HG2_PB_HySA_2130:HG3_PB_HySA_1690:HG4_PB_SVrefine2Falcon1Dovetail_705:HG2_PB_SVrefine2Falcon1plusDovetail_756:HG2_Ill_SVrefine2DISCOVARplusDovetail_898:HG2_PB_SVrefine2PBcRplusDovetail_732;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_898:HG2_PB_SVrefine2Falcon1plusDovetail_756;NumExactMatchSVs=2;ClusterMaxShiftDist=0.121212;ClusterMaxSizeDiff=0.118457;ClusterMaxEditDist=0.212121;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=727;DistBack=4171;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=277;REFWIDENED=1:203808944-203809220;PctSeqSimilarity=0.9821;PctSizeSimilarity=0.9918;PctRecOverlap=0.7735;SizeDiff=-6;StartDistance=-163;EndDistance=-163;GTMatch=0;TruScore=91;MatchId=358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:26:0|1:26:1:1:30:0|1:18:0:0:10:0/1:12:12:0/1:8:53:.:.:.
chr1	203979810	HG4_Ill_GATKHCSBGrefine_748	G	GGAGGTGATTGGATCATGGGGTGGATTTCTCCCTGCCCAAATCTCATATGGAAATGTAATCCCCAATGTTGAAGGTGGGGCCTGGAGT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_900:HG2_PB_pbsv_1102:HG4_PB_HySA_1668:HG4_Ill_Krunchall_1555:HG4_Ill_GATKHC_1743:HG4_Ill_GATKHCSBGrefine_748:HG4_Ill_250bpfermikitraw_1467:HG3_Ill_Krunchall_1523:HG3_Ill_GATKHC_1816:HG3_Ill_GATKHCSBGrefine_730:HG3_Ill_250bpfermikitraw_1467:HG3_Ill_150bpfermikitraw_1392:HG2_Ill_GATKHC_1792:HG2_Ill_GATKHCSBGrefine_711:HG2_Ill_250bpfermikitraw_1491:HG2_10X_SVrefine210Xhap12_860:HG4_PB_pbsv_1105:HG2_PB_HySA_2136:HG3_PB_SVrefine2PBcRDovetail_626:HG3_PB_SVrefine2Falcon1Dovetail_678:HG3_Ill_SVrefine2DISCOVARDovetail_772:HG2_PB_SVrefine2Falcon2Bionano_291;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_860:HG2_Ill_250bpfermikitraw_1491:HG2_Ill_GATKHCSBGrefine_711:HG2_Ill_GATKHC_1792:HG3_Ill_150bpfermikitraw_1392:HG3_Ill_250bpfermikitraw_1467:HG3_Ill_GATKHCSBGrefine_730:HG3_Ill_GATKHC_1816:HG3_Ill_Krunchall_1523:HG4_Ill_250bpfermikitraw_1467:HG4_Ill_GATKHCSBGrefine_748:HG4_Ill_GATKHC_1743:HG4_Ill_Krunchall_1555;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0677966;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.3;PBcalls=7;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=87;DistBack=51;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2202;REFWIDENED=1:203989616-203979840;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:./.:11:18:10:6:./.:13:0:6:29:0/1:16:21:./.:.:.:9488:.:.
chr1	204164262	HG4_Ill_SVrefine2DISCOVARDovetail_825	A	ACACACACACACACCCCCCACACCACACACATACACCACACACACCACACATGCACACACACACCACACACATATATACGCACACACCCATACACACACATCATACACACACACACCACACACATATATACGCACACACCCATACACACACACACCACACACACCACACATGCACACCACACACATATACACACATACACCCATACACACACATCATACACACACACACCACACACATACACCACACACACCACACATGCACACACACCACACACATATATACGCATACACCCATACACACATCATACACACACCACACACACCACACATGCACACCACACACATACACGCATACACCCATACACACACATCATACACACACACACCACACACACCACACACATATACGCATACACCCATACACACACATCATACACACACATACACCACACACAC	20	PASS	ClusterIDs=HG2_PB_pbsv_1103:HG4_PB_SVrefine2PBcRDovetail_608:HG4_Ill_GATKHCSBGrefine_749:HG2_Ill_GATKHCSBGrefine_712:HG4_PB_HySA_1671:HG2_PB_PB10Xdip_903:HG2_PB_HySA_2138:HG4_PB_pbsv_1106:HG4_Ill_SVrefine2DISCOVARDovetail_825:HG2_Ill_MetaSV_318:HG2_PB_SVrefine2PBcRplusDovetail_738:HG2_PB_SVrefine2Falcon2Bionano_292:HG2_PB_SVrefine2Falcon1plusDovetail_760:HG2_PB_SVrefine2PB10Xhap12_899:HG3_PB_SVrefine2PBcRDovetail_627:HG2_Ill_SVrefine2DISCOVARplusDovetail_904:HG3_PB_SVrefine2Falcon1Dovetail_679;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_292:HG2_PB_SVrefine2PBcRplusDovetail_738:HG4_Ill_SVrefine2DISCOVARDovetail_825:HG4_PB_SVrefine2PBcRDovetail_608;NumExactMatchSVs=4;ClusterMaxShiftDist=0.287687;ClusterMaxSizeDiff=0.264672;ClusterMaxEditDist=0.348925;PBcalls=12;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=455;DistBack=11315;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=95;REFWIDENED=1:204164263-204164357;PctSeqSimilarity=0.9799;PctSizeSimilarity=1;PctRecOverlap=0.8022;SizeDiff=0;StartDistance=-90;EndDistance=-90;GTMatch=1;TruScore=92;MatchId=360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:2:29:1:24:./.:81:1839:89:1134:0/1:5:6:./.:7:84:.:.:.
chr1	206697891	HG4_Ill_250bpfermikitraw_1480	A	AATATATTATGTATAATATATAAAATATATATTATATATTATGTATAATATATAAAAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_911:HG2_PB_HySA_2157:HG2_PB_HySA_2156:HG2_PB_pbsv_1110:HG2_PB_PB10Xdip_919:HG4_Ill_GATKHC_1763:HG4_Ill_250bpfermikitraw_1480:HG3_Ill_GATKHC_1835:HG3_Ill_250bpfermikitraw_1487:HG2_Ill_GATKHC_1815:HG2_Ill_250bpfermikitraw_1509:HG2_PB_SVrefine2PBcRplusDovetail_743:HG2_PB_SVrefine2PB10Xhap12_906:HG2_PB_SVrefine2Falcon2Bionano_295;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1509:HG2_Ill_GATKHC_1815:HG3_Ill_250bpfermikitraw_1487:HG3_Ill_GATKHC_1835:HG4_Ill_250bpfermikitraw_1480:HG4_Ill_GATKHC_1763;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0847458;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.205128;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=-154;DistForward=93;DistMin=-154;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=173;REFWIDENED=1:206697873-206698045;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:14:64:1/1:4:35:0:21:./.:2:1:2:2:0/1:5:42:./.:.:.:.:.:.
chr1	207001477	HG4_Ill_svaba_1365	A	ACTCCATCCTGAAGTGAGTAGGCTAGGCACTCACAAGTCACCTATAGGGTTAATGCTTTATGGTCTGAAAATAGC	20	PASS	ClusterIDs=HG4_PB_pbsv_1118:HG2_PB_PB10Xdip_920:HG3_PB_pbsv_1114:HG2_Ill_breakscan11_3073:HG2_PB_pbsv_1113:HG4_PB_assemblyticsfalcon_1607:HG4_Ill_svaba_1365:HG4_Ill_manta_268:HG4_Ill_Krunchall_1576:HG4_Ill_GATKHC_1769:HG4_Ill_GATKHCSBGrefine_756:HG4_Ill_250bpfermikitraw_1485:HG4_Ill_150bpfermikitraw_1438:HG3_PB_assemblyticsfalcon_1649:HG3_Ill_svaba_1402:HG3_Ill_manta_234:HG3_Ill_Spiral_1195:HG3_Ill_Krunchall_1544:HG3_Ill_GATKHC_1838:HG3_Ill_GATKHCSBGrefine_741:HG3_Ill_250bpfermikitraw_1490:HG3_Ill_150bpfermikitraw_1412:HG2_Ill_svaba_1377:HG2_Ill_manta_311:HG2_Ill_SpiralSDKrefine_1096:HG2_Ill_Krunchall_1520:HG2_Ill_GATKHC_1819:HG2_Ill_GATKHCSBGrefine_720:HG2_Ill_250bpfermikitraw_1514:HG2_Ill_150bpfermikitraw_1393;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1393:HG2_Ill_250bpfermikitraw_1514:HG2_Ill_GATKHCSBGrefine_720:HG2_Ill_GATKHC_1819:HG2_Ill_Krunchall_1520:HG2_Ill_SpiralSDKrefine_1096:HG2_Ill_manta_311:HG2_Ill_svaba_1377:HG3_Ill_150bpfermikitraw_1412:HG3_Ill_250bpfermikitraw_1490:HG3_Ill_GATKHCSBGrefine_741:HG3_Ill_GATKHC_1838:HG3_Ill_Krunchall_1544:HG3_Ill_Spiral_1195:HG3_Ill_manta_234:HG3_Ill_svaba_1402:HG3_PB_assemblyticsfalcon_1649:HG4_Ill_150bpfermikitraw_1438:HG4_Ill_250bpfermikitraw_1485:HG4_Ill_GATKHCSBGrefine_756:HG4_Ill_GATKHC_1769:HG4_Ill_Krunchall_1576:HG4_Ill_manta_268:HG4_Ill_svaba_1365:HG4_PB_assemblyticsfalcon_1607;NumExactMatchSVs=25;ClusterMaxShiftDist=0.128205;ClusterMaxSizeDiff=0.0653595;ClusterMaxEditDist=0.307692;PBcalls=6;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=46066;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:207001476-207001479;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:4:27:2:41:1/1:0:32:0:30:1/1:0:48:./.:.:.:.:.:.
chr1	207667454	HG3_Ill_GATKHCSBGrefine_759	A	AAAGAGTTGGATTGGTGGTTAGAGAGTGGGATCATTGAAATAATTGAGGGTTGCAGTGGTAAAAGAG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_1400:HG3_Ill_Spiral_1203:HG2_Ill_SpiralSDKrefine_1102:HG3_PB_pbsv_1119:HG2_PB_HySA_2175:HG2_PB_assemblyticsfalcon_1673:HG3_Ill_svaba_1409:HG2_PB_pbsv_1118:HG3_Ill_Krunchall_1553:HG3_Ill_GATKHC_1848:HG3_Ill_GATKHCSBGrefine_759:HG3_Ill_250bpfermikitraw_1498:HG3_Ill_150bpfermikitraw_1419:HG2_Ill_svaba_1383:HG2_Ill_Krunchall_1530:HG2_Ill_GATKHC_1829:HG2_Ill_GATKHCSBGrefine_741:HG2_Ill_250bpfermikitraw_1520;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1400:HG3_Ill_svaba_1409:HG3_Ill_Krunchall_1553:HG3_Ill_GATKHC_1848:HG3_Ill_GATKHCSBGrefine_759:HG3_Ill_250bpfermikitraw_1498:HG3_Ill_150bpfermikitraw_1419:HG2_Ill_svaba_1383:HG2_Ill_Krunchall_1530:HG2_Ill_GATKHC_1829:HG2_Ill_GATKHCSBGrefine_741:HG2_Ill_250bpfermikitraw_1520;NumExactMatchSVs=12;ClusterMaxShiftDist=0.1875;ClusterMaxSizeDiff=0.1875;ClusterMaxEditDist=0.296875;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=42523;DistForward=4767;DistMin=4767;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=63;REFWIDENED=1:207667445-207667507;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:23:./.:11:10:7:17:0|1:14:0:2:27:0/1:33:14:./.:.:.:.:.:.
chr1	210163903	HG3_Ill_GATKHCSBGrefine_761	T	TATACGTATATATATACGTATATATATGTATATATATACGTATATATATACGTATATATATGTATATATATAC	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_1668:HG4_Ill_Krunchall_1602:HG4_Ill_GATKHC_1799:HG4_Ill_GATKHCSBGrefine_760:HG4_Ill_150bpfermikitraw_1462:HG3_Ill_scalpel_1167:HG3_Ill_manta_237:HG3_Ill_Spiral_1215:HG3_Ill_Krunchall_1568:HG3_Ill_GATKHC_1865:HG3_Ill_GATKHCSBGrefine_761:HG3_Ill_250bpfermikitraw_1511:HG3_Ill_150bpfermikitraw_1435:HG2_Ill_Krunchall_1543:HG2_Ill_GATKHC_1840:HG2_Ill_GATKHCSBGrefine_742:HG2_Ill_250bpfermikitraw_1529:HG2_Ill_150bpfermikitraw_1407:HG2_PB_HySA_2189:HG2_PB_PB10Xdip_934:HG2_PB_pbsv_1124:HG4_PB_assemblyticsfalcon_1630:HG4_PB_SVrefine2Falcon1Dovetail_716:HG4_Ill_SVrefine2DISCOVARDovetail_847:HG3_Ill_SVrefine2DISCOVARDovetail_791:HG4_Ill_250bpfermikitraw_1504:HG3_PB_pbsv_1125;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1407:HG2_Ill_250bpfermikitraw_1529:HG2_Ill_GATKHCSBGrefine_742:HG2_Ill_GATKHC_1840:HG2_Ill_Krunchall_1543:HG3_Ill_150bpfermikitraw_1435:HG3_Ill_250bpfermikitraw_1511:HG3_Ill_GATKHCSBGrefine_761:HG3_Ill_GATKHC_1865:HG3_Ill_Krunchall_1568:HG3_Ill_Spiral_1215:HG3_Ill_manta_237:HG3_Ill_scalpel_1167:HG4_Ill_150bpfermikitraw_1462:HG4_Ill_GATKHCSBGrefine_760:HG4_Ill_GATKHC_1799:HG4_Ill_Krunchall_1602;NumExactMatchSVs=17;ClusterMaxShiftDist=0.289157;ClusterMaxSizeDiff=0.275449;ClusterMaxEditDist=0.325301;PBcalls=7;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=11;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=1:210163873-210163925;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:./.:0:3:0:46:./.:2:11:5:12:1/1:1:58:./.:.:.:.:.:.
chr1	210244609	HG3_Ill_GATKHC_1866	G	GTAAGTAGTATAATTTATATATATATATATATATATATAAGTAGTATAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_1125:HG3_PB_HySA_1732:HG3_PB_pbsv_1126:HG2_Ill_breakscan11_3074:HG2_PB_HySA_2190:HG4_Ill_svaba_1383:HG3_Ill_svaba_1423:HG3_Ill_scalpel_1168:HG3_Ill_Spiral_1216:HG3_Ill_Krunchall_1569:HG3_Ill_GATKHC_1866:HG3_Ill_GATKHCSBGrefine_762:HG3_Ill_FB_1051:HG3_Ill_250bpfermikitraw_1512:HG3_Ill_150bpfermikitraw_1436:HG2_Ill_svaba_1394:HG2_Ill_250bpfermikitraw_1530:HG2_Ill_150bpfermikitraw_1408:HG4_Ill_Krunchall_1603:HG4_Ill_GATKHC_1800:HG4_Ill_GATKHCSBGrefine_761:HG4_Ill_250bpfermikitraw_1505:HG4_Ill_150bpfermikitraw_1463:HG2_Ill_scalpel_1085:HG2_Ill_Krunchall_1544:HG2_Ill_GATKHC_1841:HG2_Ill_GATKHCSBGrefine_743:HG2_Ill_FB_1060;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1408:HG2_Ill_250bpfermikitraw_1530:HG2_Ill_svaba_1394:HG3_Ill_150bpfermikitraw_1436:HG3_Ill_250bpfermikitraw_1512:HG3_Ill_FB_1051:HG3_Ill_GATKHCSBGrefine_762:HG3_Ill_GATKHC_1866:HG3_Ill_Krunchall_1569:HG3_Ill_Spiral_1216:HG3_Ill_scalpel_1168:HG3_Ill_svaba_1423:HG4_Ill_svaba_1383;NumExactMatchSVs=13;ClusterMaxShiftDist=0.134615;ClusterMaxSizeDiff=0.115385;ClusterMaxEditDist=0.224299;PBcalls=4;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=-1;DistForward=18;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=1:210244610-210244629;PctSeqSimilarity=0.98;PctSizeSimilarity=0.96;PctRecOverlap=0.9608;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:./.:3:1:0:3:1/1:0:16:1:14:1/1:0:40:./.:.:.:.:.:.
chr1	210918376	HG2_PB_SVrefine2Falcon1plusDovetail_777	C	CTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGTGCGTGCCTGTAGTCCCAGCTGTTCTGGAGGCTGGAGACACAAGAATCGCTTGAACGTGGGAGGCAGAAGTTGCAGCGAGTGGAGG	10	PASS	ClusterIDs=HG4_PB_pbsv_1137:HG3_PB_HySA_1736:HG3_PB_pbsv_1132:HG4_PB_HySA_1712:HG2_PB_HySA_2195:HG4_PB_SVrefine2PBcRDovetail_621:HG2_PB_pbsv_1130:HG2_PB_SVrefine2Falcon1plusDovetail_777;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_777:HG4_PB_SVrefine2PBcRDovetail_621;NumExactMatchSVs=2;ClusterMaxShiftDist=0.144681;ClusterMaxSizeDiff=0.134454;ClusterMaxEditDist=0.286853;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=122;DistBack=26376;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=124;REFWIDENED=1:210918377-210918500;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=366.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:20:0|1:31:3:0:15:./.:2:0:2:13:0/1:16:13:./.:.:.:.:.:.
chr1	211782441	HG3_Ill_GATKHC_1877	T	TATATGTACATATATATATATATGTACATATATATACGTACATATATATATGTAC	20	PASS	ClusterIDs=HG3_PB_HySA_1740:HG3_PB_pbsv_1136:HG3_Ill_scalpel_1177:HG3_Ill_GATKHC_1877:HG3_Ill_GATKHCSBGrefine_769:HG3_Ill_150bpfermikitraw_1449:HG2_Ill_scalpel_1091:HG2_Ill_GATKHC_1847:HG2_Ill_GATKHCSBGrefine_747:HG4_Ill_GATKHC_1814:HG4_PB_pbsv_1142:HG4_Ill_GATKHCSBGrefine_770:HG2_PB_HySA_2202;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_747:HG2_Ill_GATKHC_1847:HG2_Ill_scalpel_1091:HG3_Ill_150bpfermikitraw_1449:HG3_Ill_GATKHCSBGrefine_769:HG3_Ill_GATKHC_1877:HG3_Ill_scalpel_1177;NumExactMatchSVs=7;ClusterMaxShiftDist=0.235294;ClusterMaxSizeDiff=0.218487;ClusterMaxEditDist=0.386555;PBcalls=4;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=1:211782428-211782453;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:31:./.:11:25:9:5:./.:10:2:1:4:0/1:6:13:./.:.:.:.:.:.
chr1	212359895	HG3_Ill_250bpfermikitraw_1532	G	GAATGTGAGGGAGGGCCAATCACATTAACATTAAATGTGAGGGAGGGCCAATCACATTAACATTA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_940:HG2_PB_pbsv_1134:HG4_PB_HySA_1721:HG3_PB_pbsv_1137:HG2_PB_HySA_2209:HG4_PB_pbsv_1143:HG4_PB_assemblyticsfalcon_1647:HG4_PB_SVrefine2PBcRDovetail_624:HG4_Ill_SVrefine2DISCOVARDovetail_858:HG4_Ill_Krunchall_1622:HG4_Ill_250bpfermikitraw_1521:HG3_PB_SVrefine2Falcon1Dovetail_701:HG3_Ill_SVrefine2DISCOVARDovetail_806:HG3_Ill_Krunchall_1590:HG3_Ill_250bpfermikitraw_1532:HG2_PB_SVrefine2PBcRplusDovetail_760:HG2_PB_SVrefine2PB10Xhap12_924:HG2_PB_SVrefine2Falcon2Bionano_309:HG2_PB_SVrefine2Falcon1plusDovetail_781:HG2_Ill_SVrefine2DISCOVARplusDovetail_933:HG2_Ill_250bpfermikitraw_1541;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1541:HG2_Ill_SVrefine2DISCOVARplusDovetail_933:HG2_PB_SVrefine2Falcon1plusDovetail_781:HG2_PB_SVrefine2Falcon2Bionano_309:HG2_PB_SVrefine2PB10Xhap12_924:HG2_PB_SVrefine2PBcRplusDovetail_760:HG3_Ill_250bpfermikitraw_1532:HG3_Ill_Krunchall_1590:HG3_Ill_SVrefine2DISCOVARDovetail_806:HG3_PB_SVrefine2Falcon1Dovetail_701:HG4_Ill_250bpfermikitraw_1521:HG4_Ill_Krunchall_1622:HG4_Ill_SVrefine2DISCOVARDovetail_858:HG4_PB_SVrefine2PBcRDovetail_624:HG4_PB_assemblyticsfalcon_1647;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0763359;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.257576;PBcalls=13;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=96;REFWIDENED=1:212359896-212359991;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=368.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:./.:1:22:0:1:./.:2:9:0:0:0/1:6:39:./.:.:.:.:.:.
chr1	212898386	HG3_Ill_Krunchall_1599	G	GGGAGGTGGGGGGCAGCCCCCATCCGGCCAGCCGCCCTGTCCGGGAGGTGGGGGGGCAGCCCCCGCCCGGCCAGCCGCCACGCCCA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_1426:HG3_PB_pbsv_1141:HG2_PB_PB10Xdip_942:HG2_PB_HySA_2218:HG4_PB_pbsv_1147:HG4_Ill_Krunchall_1632:HG4_Ill_GATKHC_1826:HG4_Ill_GATKHCSBGrefine_774:HG4_Ill_250bpfermikitraw_1528:HG4_Ill_150bpfermikitraw_1487:HG3_Ill_Spiral_1236:HG3_Ill_Krunchall_1599:HG3_Ill_GATKHC_1895:HG3_Ill_GATKHCSBGrefine_773:HG3_Ill_250bpfermikitraw_1539:HG3_Ill_150bpfermikitraw_1464:HG2_Ill_manta_317:HG2_Ill_Krunchall_1563:HG2_Ill_GATKHC_1859:HG2_Ill_GATKHCSBGrefine_751:HG2_Ill_250bpfermikitraw_1548;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1426:HG4_Ill_Krunchall_1632:HG4_Ill_GATKHC_1826:HG4_Ill_GATKHCSBGrefine_774:HG4_Ill_250bpfermikitraw_1528:HG4_Ill_150bpfermikitraw_1487:HG3_Ill_Spiral_1236:HG3_Ill_Krunchall_1599:HG3_Ill_GATKHC_1895:HG3_Ill_GATKHCSBGrefine_773:HG3_Ill_250bpfermikitraw_1539:HG3_Ill_150bpfermikitraw_1464:HG2_Ill_manta_317:HG2_Ill_Krunchall_1563:HG2_Ill_GATKHC_1859:HG2_Ill_GATKHCSBGrefine_751:HG2_Ill_250bpfermikitraw_1548;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0470588;ClusterMaxSizeDiff=0.0116959;ClusterMaxEditDist=0.258824;PBcalls=4;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=85;DistBack=6;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=270;REFWIDENED=1:212898332-212898601;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:58:./.:9:59:1:1:./.:3:8:0:7:1/1:0:31:./.:.:.:.:.:.
chr1	212980180	HG2_Ill_GATKHCSBGrefine_752	A	ATATATACACATATATACATATATATACACATATATACATATGTATATACACATATATACATATG	20	PASS	ClusterIDs=HG3_PB_pbsv_1142:HG4_Ill_GATKHC_1830:HG2_PB_pbsv_1139:HG2_PB_HySA_2220:HG4_Ill_GATKHCSBGrefine_775:HG3_Ill_GATKHC_1897:HG2_Ill_Krunchall_1566:HG2_Ill_GATKHC_1861:HG2_Ill_GATKHCSBGrefine_752:HG2_Ill_250bpfermikitraw_1550;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1550:HG2_Ill_GATKHCSBGrefine_752:HG2_Ill_GATKHC_1861:HG2_Ill_Krunchall_1566:HG3_Ill_GATKHC_1897:HG4_Ill_GATKHCSBGrefine_775:HG4_Ill_GATKHC_1830;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0152672;ClusterMaxEditDist=0.292308;PBcalls=3;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=-1;DistForward=17;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=181;REFWIDENED=1:212980094-212980274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=370.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:51:1/1:7:27:2:9:./.:1:13:0:0:1/1:0:40:./.:.:.:.:.:.
chr1	219247374	HG3_Ill_MetaSV_326	G	GCAGGGCAAGGGAGGCACTGAAGAAAAACTTGTTAAGTAAGAAAAATTTGAGCATGTGCTTTTCCTCAGTGGGAGATGGGAAGGAATAAAAATAATAGAGTTATCCTCTCTCTCTCTAACTCTATTATTTTTATTCCTTCCCATCTCCCACTGAGGAAAAGCACATGCTCAAATTTTTCTTACTTAACAAGTTTTTCTT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3076:HG3_PB_pbsv_1171:HG4_PB_pbsv_1176:HG3_PB_assemblyticsfalcon_1753:HG2_PB_pbsv_1167:HG4_PB_SVrefine2PBcRDovetail_639:HG4_Ill_manta_282:HG4_Ill_SVrefine2DISCOVARDovetail_879:HG4_Ill_MetaSV_353:HG4_Ill_GATKHCSBGrefine_799:HG4_Ill_250bpfermikitraw_1574:HG4_Ill_150bpfermikitraw_1537:HG3_PB_SVrefine2Falcon1Dovetail_724:HG3_Ill_manta_251:HG3_Ill_SVrefine2DISCOVARDovetail_831:HG3_Ill_MetaSV_326:HG3_Ill_GATKHCSBGrefine_802:HG3_Ill_250bpfermikitraw_1579:HG3_Ill_150bpfermikitraw_1509:HG2_PB_SVrefine2PBcRplusDovetail_777:HG2_PB_SVrefine2PB10Xhap12_947:HG2_PB_SVrefine2Falcon2Bionano_324:HG2_PB_SVrefine2Falcon1plusDovetail_801:HG2_Ill_manta_323:HG2_Ill_SVrefine2DISCOVARplusDovetail_955:HG2_Ill_MetaSV_334:HG2_Ill_GATKHCSBGrefine_772:HG2_Ill_250bpfermikitraw_1588:HG2_Ill_150bpfermikitraw_1464:HG4_PB_SVrefine2Falcon1Dovetail_741:HG2_PB_PB10Xdip_972;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1464:HG2_Ill_250bpfermikitraw_1588:HG2_Ill_GATKHCSBGrefine_772:HG2_Ill_MetaSV_334:HG2_Ill_SVrefine2DISCOVARplusDovetail_955:HG2_Ill_manta_323:HG2_PB_SVrefine2Falcon1plusDovetail_801:HG2_PB_SVrefine2Falcon2Bionano_324:HG2_PB_SVrefine2PB10Xhap12_947:HG2_PB_SVrefine2PBcRplusDovetail_777:HG3_Ill_150bpfermikitraw_1509:HG3_Ill_250bpfermikitraw_1579:HG3_Ill_GATKHCSBGrefine_802:HG3_Ill_MetaSV_326:HG3_Ill_SVrefine2DISCOVARDovetail_831:HG3_Ill_manta_251:HG3_PB_SVrefine2Falcon1Dovetail_724:HG4_Ill_150bpfermikitraw_1537:HG4_Ill_250bpfermikitraw_1574:HG4_Ill_GATKHCSBGrefine_799:HG4_Ill_MetaSV_353:HG4_Ill_SVrefine2DISCOVARDovetail_879:HG4_Ill_manta_282:HG4_PB_SVrefine2PBcRDovetail_639;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0594059;ClusterMaxSizeDiff=0.0594059;ClusterMaxEditDist=0.20438;PBcalls=12;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=198;DistBack=81477;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=1:219247375-219247377;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=374.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:27:0:9:1/1:0:10:0:13:1/1:0:26:./.:.:.:.:.:.
chr1	219574677	HG2_Ill_GATKHCSBGrefine_773	T	TGCCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATATTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGC	20	PASS	ClusterIDs=HG2_PB_pbsv_1168:HG2_PB_HySA_2284:HG2_PB_PB10Xdip_973:HG2_PB_SVrefine2PB10Xhap12_948:HG4_PB_SVrefine2Falcon1Dovetail_742:HG3_PB_pbsv_1172:HG3_PB_HySA_1815:HG3_PB_assemblyticsfalcon_1754:HG3_Ill_MetaSV_327:HG3_Ill_GATKHCSBGrefine_803:HG2_Ill_GATKHCSBGrefine_773:HG2_PB_SVrefine2Falcon1plusDovetail_802:HG2_Ill_MetaSV_335:HG3_PB_SVrefine2Falcon1Dovetail_725:HG2_Ill_breakscan11_3077;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_773:HG3_Ill_GATKHCSBGrefine_803;NumExactMatchSVs=2;ClusterMaxShiftDist=0.21229;ClusterMaxSizeDiff=0.21229;ClusterMaxEditDist=0.268939;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=285;DistBack=25844;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:219574678-219574692;PctSeqSimilarity=0.993;PctSizeSimilarity=0.986;PctRecOverlap=0.986;SizeDiff=4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:38:0|1:30:0:1:40:1|0:0:5:23:0:0/1:33:7:./.:.:.:.:.:.
chr1	220186166	HG2_PB_SVrefine2PB10Xhap12_956	A	GAGGGGGAAGGACCAGAGGGCCTCCAGATCCCCTTCACATACTTCAACCAGAACAGCTATGTTTCTGTTTTATTTATTGGGGTTTAATTCTGGTAGCACTAAGTGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_983:HG2_PB_HySA_2297:HG3_PB_HySA_1827:HG3_PB_pbsv_1177:HG4_PB_SVrefine2PBcRDovetail_645:HG2_PB_pbsv_1176:HG4_PB_SVrefine2Falcon1Dovetail_747:HG4_Ill_SVrefine2DISCOVARDovetail_886:HG3_PB_assemblyticsfalcon_1760:HG3_PB_SVrefine2Falcon1Dovetail_731:HG3_Ill_SVrefine2DISCOVARDovetail_838:HG2_PB_assemblyticsPBcR_1782:HG2_PB_SVrefine2PBcRplusDovetail_782:HG2_PB_SVrefine2PB10Xhap12_956:HG2_PB_SVrefine2Falcon2Bionano_330:HG2_PB_SVrefine2Falcon1plusDovetail_807:HG2_Ill_SVrefine2DISCOVARplusDovetail_961:HG2_10X_SVrefine210Xhap12_914:HG4_PB_pbsv_1184:HG4_PB_HySA_1795:HG4_Ill_GATKHCSBGrefine_806:HG4_Ill_250bpfermikitraw_1584:HG4_Ill_150bpfermikitraw_1545:HG3_Ill_GATKHC_1971:HG2_Ill_GATKHC_1928:HG2_Ill_GATKHCSBGrefine_781:HG2_Ill_250bpfermikitraw_1596:HG2_Ill_150bpfermikitraw_1472;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_914:HG2_Ill_SVrefine2DISCOVARplusDovetail_961:HG2_PB_SVrefine2Falcon1plusDovetail_807:HG2_PB_SVrefine2Falcon2Bionano_330:HG2_PB_SVrefine2PB10Xhap12_956:HG2_PB_SVrefine2PBcRplusDovetail_782:HG2_PB_assemblyticsPBcR_1782:HG3_Ill_SVrefine2DISCOVARDovetail_838:HG3_PB_SVrefine2Falcon1Dovetail_731:HG3_PB_assemblyticsfalcon_1760:HG4_Ill_SVrefine2DISCOVARDovetail_886:HG4_PB_SVrefine2Falcon1Dovetail_747:HG4_PB_SVrefine2PBcRDovetail_645;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0654206;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.3;PBcalls=16;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=105;DistBack=-1;DistForward=7999;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=210;REFWIDENED=1:220186045-220186254;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=0.6095;SizeDiff=0;StartDistance=41;EndDistance=41;GTMatch=0;TruScore=86;MatchId=376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:3:15:0:18:./.:4:13:6:15:./.:2:29:./.:.:.:.:.:.
chr1	220749341	HG2_PB_SVrefine2Falcon2Bionano_332	T	TCTTCTCTCCCTCCCTCCCCCTCCCTCCCTCCCTCCTTCCCCCCTCCCCCCTTTCCCCCTTCCCTCCTTCCCTCCTTCCCACCTCCTTTCCTCCTTCCCTCCTTCCCTCCTCCTTCTCCCCTTCCTGTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCCTCCTCTTTCTCTCCTTTCCTCCTTCCCTCCTACTTCTCTCCTTCCTTCCCTCCTCCTTCTCTCCTTCCTTCCCTCCTTCCCTCTTCCTTCCTTCTTTCCTTCCTTCCTTCCCTCCCTCCTTCCTTTCTTCTTTCCTTCCTTC	20	PASS	ClusterIDs=HG2_PB_HySA_2303:HG2_PB_pbsv_1183:HG2_PB_PB10Xdip_987:HG3_PB_HySA_1835:HG3_Ill_MetaSV_331:HG4_Ill_MetaSV_356:HG4_Ill_GATKHCSBGrefine_808:HG3_Ill_GATKHCSBGrefine_811:HG2_Ill_MetaSV_341:HG2_Ill_GATKHCSBGrefine_785:HG2_PB_assemblyticsPBcR_1788:HG3_PB_assemblyticsfalcon_1770:HG3_PB_SVrefine2Falcon1Dovetail_735:HG4_PB_SVrefine2Falcon1Dovetail_750:HG4_PB_SVrefine2PBcRDovetail_647:HG2_PB_SVrefine2Falcon1plusDovetail_810:HG4_Ill_SVrefine2DISCOVARDovetail_890:HG3_PB_SVrefine2PBcRDovetail_650:HG3_Ill_SVrefine2DISCOVARDovetail_841:HG2_PB_SVrefine2PBcRplusDovetail_785:HG2_PB_SVrefine2PB10Xhap12_960:HG2_PB_SVrefine2Falcon2Bionano_332:HG2_Ill_SVrefine2DISCOVARplusDovetail_965:HG2_10X_SVrefine210Xhap12_918:HG3_PB_pbsv_1183;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_918:HG2_Ill_SVrefine2DISCOVARplusDovetail_965:HG2_PB_SVrefine2Falcon2Bionano_332:HG2_PB_SVrefine2PB10Xhap12_960:HG2_PB_SVrefine2PBcRplusDovetail_785:HG3_Ill_SVrefine2DISCOVARDovetail_841;NumExactMatchSVs=6;ClusterMaxShiftDist=0.234483;ClusterMaxSizeDiff=0.234483;ClusterMaxEditDist=0.268966;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=315;DistBack=9;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=1:220749342-220749359;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9841;SizeDiff=1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=377.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:1:34:0:24:1/1:1:23:0:21:1/1:0:15:0/1:2:17:.:.:.
chr1	221827803	HG2_Ill_GATKHCSBGrefine_787	C	CAACCAATCCAATCTTTTTTTTTTTTTTTTTTCTTTTTTTATTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTGTACATGTGCCATGCTGGTGCTCTGCACCCACTAACGTGTCATCTAGCATTAGATATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGCAGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAGAGGTGGGAGGATAGCTTGAGCCCAGGAGTTCGAGACCTGCCTGGGCAATATAGCGAGACCCCGTTCTCCAGAAAAAGGAAAAAAAAAACAAAACAAAAGACAAAAAAAAAAAAATAAGCGTAACTTCCCTCAAGGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_963:HG2_PB_pbsv_1185:HG3_PB_pbsv_1186:HG4_PB_SVrefine2Falcon1Dovetail_751:HG2_Ill_MetaSV_342:HG3_Ill_GATKHCSBGrefine_812:HG2_Ill_GATKHCSBGrefine_787:HG3_Ill_MetaSV_332:HG2_PB_HySA_2315:HG2_Ill_breakscan11_3078:HG2_PB_assemblyticsPBcR_1795:HG3_PB_assemblyticsfalcon_1775:HG2_PB_SVrefine2Falcon1plusDovetail_811:HG2_PB_SVrefine2Falcon2Bionano_333:HG3_PB_SVrefine2Falcon1Dovetail_736:HG2_PB_SVrefine2PBcRplusDovetail_787;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_787:HG3_Ill_GATKHCSBGrefine_812;NumExactMatchSVs=2;ClusterMaxShiftDist=0.149638;ClusterMaxSizeDiff=0.149638;ClusterMaxEditDist=0.185036;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=628;DistBack=-18;DistForward=-1;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=1:221827797-221827821;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=379.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:20:41:0|1:19:0:0:41:1|0:0:8:17:0:0/1:24:9:./.:8:85:.:.:.
chr1	221969155	HG4_Ill_GATKHCSBGrefine_811	A	AAAGAAATTCATTTTTATTTTTATTTTTTTTTTTTATTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_812:HG4_PB_HySA_1803:HG2_PB_pbsv_1186:HG2_Ill_breakscan11_3079:HG2_Ill_MetaSV_343:HG4_Ill_manta_286:HG4_Ill_MetaSV_357:HG4_Ill_GATKHCSBGrefine_811:HG2_Ill_manta_328:HG2_Ill_GATKHCSBGrefine_788;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_788:HG2_Ill_manta_328:HG4_Ill_GATKHCSBGrefine_811:HG4_Ill_MetaSV_357:HG4_Ill_manta_286;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0387481;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.159057;PBcalls=3;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=332;DistBack=36;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=1:221969156-221969171;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=380.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:22:1|0:0:18:32:4:0|1:18:0:0:7:0/1:24:20:0/1:10:52:.:.:.
chr1	222263518	HG3_Ill_250bpfermikitraw_1602	G	GTCACAGCTGGGATGTGAAAGCAGATTCCACAATCCTCTCTCACGTTTCTTGCAGACATAACATAACAGACAAACTAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_922:HG3_PB_pbsv_1188:HG4_PB_pbsv_1193:HG2_PB_HySA_2321:HG2_PB_assemblyticsPBcR_1798:HG2_PB_PB10Xdip_992:HG2_Ill_breakscan11_3080:HG3_PB_HySA_1845:HG4_Ill_svaba_1462:HG4_Ill_manta_288:HG4_Ill_Krunchall_1712:HG4_Ill_GATKHCSBGrefine_813:HG4_Ill_Cortex_261:HG4_Ill_250bpfermikitraw_1598:HG4_Ill_150bpfermikitraw_1561:HG3_Ill_svaba_1511:HG3_Ill_manta_258:HG3_Ill_Spiral_1289:HG3_Ill_Krunchall_1683:HG3_Ill_GATKHC_1988:HG3_Ill_GATKHCSBGrefine_814:HG3_Ill_Cortex_276:HG3_Ill_250bpfermikitraw_1602:HG3_Ill_150bpfermikitraw_1530:HG2_Ill_svaba_1462:HG2_Ill_manta_330:HG2_Ill_SpiralSDKrefine_1173:HG2_Ill_Krunchall_1644:HG2_Ill_GATKHC_1947:HG2_Ill_GATKHCSBGrefine_790:HG2_Ill_Cortex_556:HG2_Ill_250bpfermikitraw_1612:HG2_Ill_150bpfermikitraw_1485:HG3_PB_assemblyticsfalcon_1778:HG3_PB_SVrefine2PBcRDovetail_653:HG3_PB_SVrefine2Falcon1Dovetail_738:HG3_Ill_SVrefine2DISCOVARDovetail_846:HG2_PB_SVrefine2Falcon2Bionano_335:HG2_PB_SVrefine2Falcon1plusDovetail_814:HG2_Ill_SVrefine2DISCOVARplusDovetail_969;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1485:HG2_Ill_250bpfermikitraw_1612:HG2_Ill_Cortex_556:HG2_Ill_GATKHCSBGrefine_790:HG2_Ill_GATKHC_1947:HG2_Ill_Krunchall_1644:HG2_Ill_SpiralSDKrefine_1173:HG2_Ill_manta_330:HG2_Ill_svaba_1462:HG3_Ill_150bpfermikitraw_1530:HG3_Ill_250bpfermikitraw_1602:HG3_Ill_Cortex_276:HG3_Ill_GATKHCSBGrefine_814:HG3_Ill_GATKHC_1988:HG3_Ill_Krunchall_1683:HG3_Ill_Spiral_1289:HG3_Ill_manta_258:HG3_Ill_svaba_1511:HG4_Ill_150bpfermikitraw_1561:HG4_Ill_250bpfermikitraw_1598:HG4_Ill_Cortex_261:HG4_Ill_GATKHCSBGrefine_813:HG4_Ill_Krunchall_1712:HG4_Ill_manta_288:HG4_Ill_svaba_1462;NumExactMatchSVs=25;ClusterMaxShiftDist=0.225166;ClusterMaxSizeDiff=0.225166;ClusterMaxEditDist=0.251656;PBcalls=11;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=15;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=77;DistBack=-4;DistForward=2;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=1:222263515-222263522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:50:0|1:21:3:0:52:1|0:0:27:20:0:0/1:25:34:./.:.:.:.:.:.
chr1	222296143	HG2_PB_SVrefine2Falcon1plusDovetail_815	T	TTGGACCTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_739:HG4_PB_pbsv_1194:HG2_PB_pbsv_1189:HG4_PB_HySA_1806:HG2_PB_SVrefine2Falcon2Bionano_336:HG2_PB_SVrefine2Falcon1plusDovetail_815:HG4_Ill_MetaSV_359:HG4_PB_SVrefine2Falcon1Dovetail_753:HG2_PB_HySA_2322:HG2_Ill_breakscan11_3081:HG3_PB_assemblyticsfalcon_1779;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_815:HG2_PB_SVrefine2Falcon2Bionano_336;NumExactMatchSVs=2;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.188034;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=290;DistBack=9405;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:222296144-222296156;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:31:6:2:17:0|1:26:0:1:5:0/1:30:8:./.:.:.:.:.:.
chr1	222852615	HG2_PB_SVrefine2PBcRplusDovetail_790	T	TAAAAGAAGAATGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_1191:HG4_PB_assemblyticsfalcon_1741:HG3_PB_HySA_1853:HG3_PB_pbsv_1191:HG3_PB_assemblyticsfalcon_1785:HG2_PB_PB10Xdip_1001:HG4_PB_HySA_1813:HG4_PB_pbsv_1197:HG2_PB_HySA_2330:HG2_Ill_breakscan11_3082:HG4_PB_SVrefine2PBcRDovetail_650:HG2_PB_SVrefine2PBcRplusDovetail_790:HG2_PB_SVrefine2PB10Xhap12_966:HG2_PB_SVrefine2Falcon2Bionano_338:HG3_PB_SVrefine2Falcon1Dovetail_740:HG2_PB_SVrefine2Falcon1plusDovetail_816:HG2_10X_SVrefine210Xhap12_926:HG4_PB_SVrefine2Falcon1Dovetail_755;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_338:HG2_PB_SVrefine2PB10Xhap12_966:HG2_PB_SVrefine2PBcRplusDovetail_790:HG4_PB_SVrefine2PBcRDovetail_650;NumExactMatchSVs=4;ClusterMaxShiftDist=0.14826;ClusterMaxSizeDiff=0.14826;ClusterMaxEditDist=0.290323;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=335;DistBack=61257;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:222852616-222852628;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9911;PctRecOverlap=0.9882;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:./.:0:0:0:0:./.:0:5:0:2:1/1:0:15:1/1:1:81:.:.:.
chr1	223254530	HG2_Ill_SVrefine2DISCOVARplusDovetail_974	T	TGTGTTTTGGCATATGTGTATTGCGTGTGGTGGGTATATATTGCATGGTGTGTGGTATGTAGATATGCGGGTGTGGCGTGAGGTGTTGGTGTGTATGTGGGTGTGTTGTGTGTGGTGGGTAGACACTGTGCAGTGGGTGAGTGTGGTGTGAGGTGTGAGTATGTGGGGTGTGGTGTGCATGTGGCGGGTATGTACTGTGTGGTGTGTGTGTGGGGTATATGTGGTGGGTATATATTGTGTGGTGTGTGGCATGCAGATGTGTAGGTGTGGCATGGGTAGCTGTGTATGTGGGTTGTAGTGTGTGGTCTATGGTGTGTGTGGTGGGTACATATTGTATGATGTGTGGTGTGTAGATGTGTGGGTGTGTATATGGGGTGTGCTGTGTGATGTGTGTGTGGTGTGTAGACGTATGTGTGGTGTGTGTGTGTTGTGATGTATGTGGTGTATATGTGGTGTCTGTAGTGGGTATACTATACTATGTGGTATTGGTGTGTAGACACATGTGTGGTGTATGTGTGGGCTGTGTGTGTGTGGTGTGATGTATGTGGTGTGTATATGGTGTGTGTGGTGGCTATGCATTGTAATGTGGGTGGTGTGTAGATGTGTGGGTGGAGTGTGTGGGTATGTCGTATGCATGTGGGATATGTGTGCTGTGTGTAGTGAGTATATTGTGTGGTATGTGGTGTGTAGATGTGTGTGTATGGTGTGTAGGTGTGTGGGTGTGGTGTGTGTGTAGGCAGTGTGTGTAGTGGTTATACTGTGTGGTATATGGTGTGTAGATGCGTGGCGTGTGTGGTTTGTGTGTATGTGGGGTATGTGTAGTGTGTGTAGTTGGTATAGTGTATGGTATGTGGTGTGTAGACCTGTGTGTGGTGTGTGTGTGGTGGGTATACAGAGTGGTGTGTTTGCTGTATGTGGTGTGTGTGTTGTGTGTGTGTTGTATGGGGTGTGTGCTGGGTATACAGTGTGGTGTGTGGCTGTGTGTGTGGGGTGTACATGGTGTGGCATGTGTGGTGTGTAGACGTGTGTGCTGTGTGTGTGTGGGGGTGTGGTGGGTATATAGTGTGTGTGCTCTGTGTGGTGTGTGTGGTGTGGCTTCTGTGCTGTGTGTGTGTGGTGTGTGTGGTGTGGCGTGCGTACTGTGTGTGTGTGGTGTGTGTGTGGTGGGTATAGAGTGTGTGTGTGGTGTGTGCTCTGTGTGTGTGTGGTGTGGCGTGTGTGCTGTGTGTGTGGCATGTGTGCTGTGTGTGGTGTGTGCTGAGTGTGTGTGGGGTGTGTGTGGTGGGTATACAGTGTGGTGTGTGTGCTGTGTGTGTGGTGTGTATGTGTGTGGTGGGTATATAGTGTGGTGTGTGTGCTGTGTTGTGTGTGCTGTGGCATGTGTGTGATGTGTATGTGTGGTGTGTGCATGTGGTGTGTGGGTGTGGTGGGTATACAGTGTGGTGTGTGCTGTGTGTGTGTGGTGTGTGCTGCGGCGTGTGTGCTGTGGCATGTGTGGGGTGCGTGTGTGGTAGGTATACAGTGTGGTGTGTGTGTTCTGTGTGGTGTGTGTGTGGTGGGTATACAGTGTGGTGTGCTGTGTGTGGTGGGTTTGTGTATGTGCTGTGTGTGGTGGGTATACAGTGTGGTGTGTGTGCTGTGTATGTGTGCTGTGTGTAGTGTGTGTGCTGTGTGCGTGTGTGTGGTGTGTGTGGTGTGTATACAGTGTGGTGTGCATGCTGTGTTTTTGTGGTAGGTATACAGTGTGGTGTGTGTGCTGTGTATGCGTGGTGTGTGTGTTGTGTGCTGTGTGCGTGTGTGTGGTGGGTATACAGTGTGGTGTGTGTATGGTGTGTATGTATGCGTTTGGTGTGTGTGCTGTGACATGTGTGCTGTGGCATGTGTTTGGTGCGTGTGTGGCAGGTATACAGTGTGGTGTGTGTGTTCTGTGTGGTATGTGTGTGGTGGGTATACAGTGTGGTGTGCTATGTGTGGTTGGGTGTGTGGTGTGTGTGTGGTGGGTATACAGTGTGTGTGTGCTGTGTATGTGTGCTGTGTGTGGTGTGTGTGCTGTGTGTGGTAGGTATACAGTGTGCTGTGCATGCTGTGTGCGTGTGTGGTGTGTGTGGTGGGTATACAGTGTGGTGTGCTATGTGTGGTTGGGTGTGTGGTGTGTGTGTGGTGGGTATACAGTGTGTGTGTGCTGTGTATGTGTGCTGTGTGTGGTGTGTGTGCTGTGTGTGGTAGGTATACAGTGTGCTGTGCATGCTGTGTGCGTGTGTGGTGTGTGTGGTGGGTATACAGTGTGGTGTGTGTGCTGTGTATGTGTGGTGTGTATGTTGCGTGCTGTGTGCGTGTGTGTGGTGGGTATACAGTGTGGTGTGTGGTATGGTGCATATGTGTGTGTGTGTGTGGTGGGTATATAGTGTGCTGTGTGTGTGTGGTGTGTGTGCTGTGGCGTGTGTGGGTTGTGTGTAGTGTGTGTAGTTGGTATACTGTACAGTATGTGGTGCGTAGACCTGTGTGTGGTGTGTGTGTGTGGTGTGTGTGTGGTGGGTATACAGTGTGGTGTGTTTGCTGTATGTGGTGTGTGTGTTGTGTGTGTGTTGTATGGGGTGTGTGTGGTGGGTATACAGTGTGGTGTGTGTGCTGTGTGTGTGGGGTGTACATGGTGTGGTGTGTGTGGTGTGTAGACATGTGTGTGTTGTGTGTGTGGGGGGTGTGGTGGGTATATAGTATGGTGTGTGTGCTCTATGTGTGGTGTGTGTGGTGTGGCTTGTGAGCTGTGTGTGCGCTGTGTGTGTGTGGTGGGTATAGTGTGTGTGGTGTGTGTGCTCTGTGTGTGTGGTATGTGTGGTGTGGCGTGTGTGCTGTGTGTGTGGCGTGTGTGCAGTGTGTGCTGGGTGCTTGTGTGGGGTGTGTGTGGTGGGTATACAGTGTGGTGTGTGTGCTGTGTGTGGGGGGTGTGTGTGTGGTGGGTATATAGTGTGGTGTGTGGTCTGTGTTGTGTGTGTCGTGTGTGTGTGGTGTGTGCGTGTGGTGTGTGTGTATGTGGTGGGTATACAGTGTGGTGTGTGTGCTGTGTGTGTGGTGTGTGTGCTGTGGTGTGTGTGCTGTGGCATGTGTGGGGTGCGTGTGTGGTAGGTATACAATGTGGTGTGTGTGTTCTGTGTGGTGTGTGTGTGGTGGGTATACAGTGTGGTGTGCTGTGTTTGGTTGGCTGTGTGTGTAGTGTGTGTGTGGTGGGTATACAGTGGTGTGTGTGCTGTGTATGTGTGCTGTGTGTAGTGTGTGTGCTGTGTGAGTGTGTGTGGTGTGTGTGGTGGGTATACAGTGTGGTGTGCATGCTGTGTGTGTGGTAGGTACACAGTGTGGTGTGTGTGCTGTGTATGTGTGCTGTGTGTGTGGTGTGTGTGCTGTATGCGTGTGTGGTGTGTGTGGTGGGTATACAGTGTGGTGTGTGTGCTGTGTATGTGTGGTGTGTGTGTTATGTGCTCTGTGTGTGTGTGTGGTGGGTATACAGTGTGGTGTGAGCAAAGTGTGTATGTATGCGTTTGTGTGGTGTGTGTGCTGTGGCGTGTGTGGGGTGCGTGTGGTAGGTATACAGTGTGGTGTGTGTGTTCTGTGTGGTATGTGTGTGGTGTGTATACAGTGTGGTGTGCTATGTGTGGTTGGGTGTGTGTATGTGCTGGGTGTGTGTATGTGCTGTGTGTGTGGGGTGTGTGTGCTGTGTATGTGTGCTGTGTGTGCTGTGTATGGTGTGTGTGCTGTGTGTGGTAGGTATACAGTGTGCTGTGTGTGTGCTGTGTGTATGTGGTGTGTGTGCTGTGTGCGTGTGTGGTGTGTGGTGGGTATACAGTGTGGTGTGTGTGCTGTGTATGTGTGGTGTGTGTGTGTGCTGTGTGCGTGTGTGTGGTGGGTATACAGTGTGGTGTGTGTATGGTGTGTATGTGTGAGTGTGTGTGGTGGGTATACAGTATGCTGTGTGTGTGTGCTGTCTGTGTGGGGGGTGTGTGTGGGTCCCCTGAGTGGTGTGGGGGAACAGGGACGGACCGCAGGTGCAGGTGCTGGCGGTGGTTGTGTCACCAGCCAGATGGCTCTATCTATGAAGACTGTTTTTGGGATTTCTGTTGGCGTTTTGTTTGTTGTGTGTTTTGTCAGCTTGCGCCTCACAGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_1002:HG2_PB_pbsv_1193:HG4_PB_pbsv_1200:HG2_PB_SVrefine2Falcon1plusDovetail_819:HG3_PB_SVrefine2Falcon1Dovetail_742:HG4_PB_SVrefine2Falcon1Dovetail_758:HG2_PB_SVrefine2PBcRplusDovetail_793:HG2_PB_SVrefine2PB10Xhap12_969:HG2_PB_SVrefine2Falcon2Bionano_341:HG2_Ill_SVrefine2DISCOVARplusDovetail_974:HG3_PB_SVrefine2PBcRDovetail_656;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_974:HG2_PB_SVrefine2Falcon2Bionano_341;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0512941;ClusterMaxSizeDiff=0.0503529;ClusterMaxEditDist=0.189683;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=4154;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:223254531-223254531;PctSeqSimilarity=0.9999;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=384.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:./.:0:1:0:0:1/1:0:11:0:8:1/1:0:44:1/1:0:290:.:4336:.
chr1	225272513	HG4_Ill_GATKHCSBGrefine_828	G	GAGTATAATAAAAAAAAAAAATTAAAAAATAAATAAATAAATAAATAAAATAAAATAAAATAAAATAAAATTAAATTAAAAAAA	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_1758:HG4_Ill_250bpfermikitraw_1625:HG4_Ill_GATKHC_1963:HG4_Ill_GATKHCSBGrefine_828:HG3_Ill_GATKHC_2024:HG3_Ill_GATKHCSBGrefine_828:HG2_Ill_GATKHCSBGrefine_806:HG3_Ill_Krunchall_1715:HG3_Ill_250bpfermikitraw_1633:HG3_Ill_150bpfermikitraw_1563:HG2_Ill_Krunchall_1677:HG2_Ill_250bpfermikitraw_1642:HG2_PB_pbsv_1207:HG4_Ill_manta_292:HG3_Ill_manta_263:HG3_Ill_Spiral_1316:HG2_Ill_manta_338:HG2_Ill_SpiralSDKrefine_1197:HG3_PB_pbsv_1205:HG4_PB_pbsv_1213:HG2_PB_HySA_2370;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_806:HG3_Ill_GATKHCSBGrefine_828:HG3_Ill_GATKHC_2024:HG4_Ill_GATKHCSBGrefine_828:HG4_Ill_GATKHC_1963;NumExactMatchSVs=5;ClusterMaxShiftDist=0.136646;ClusterMaxSizeDiff=0.136646;ClusterMaxEditDist=0.213836;PBcalls=5;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=83;DistBack=6;DistForward=9844;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:225272512-225272515;PctSeqSimilarity=0.9882;PctSizeSimilarity=0.9765;PctRecOverlap=0.9765;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:43:0|1:27:5:2:40:1|0:0:15:30:0:0/1:37:30:./.:.:.:.:.:.
chr1	225905171	HG2_Ill_GATKHC_1993	C	CAGAGTGAGACTCCGTCTCAAACAAACAAACAAAAAAAGAGTAGCAGAGTGCCAAAAAAGGTTCAAGGACAGGTTCCTCATTGGGAA	20	PASS	ClusterIDs=HG2_PB_pbsv_1211:HG4_Ill_svaba_1501:HG4_PB_pbsv_1217:HG4_Ill_manta_295:HG4_Ill_Krunchall_1756:HG4_Ill_GATKHC_1968:HG4_Ill_GATKHCSBGrefine_833:HG4_Ill_250bpfermikitraw_1632:HG4_Ill_150bpfermikitraw_1595:HG2_Ill_svaba_1502:HG2_Ill_manta_340:HG2_Ill_SpiralSDKrefine_1200:HG2_Ill_Krunchall_1687:HG2_Ill_GATKHC_1993:HG2_Ill_GATKHCSBGrefine_811:HG2_Ill_250bpfermikitraw_1655:HG2_Ill_150bpfermikitraw_1523:HG2_PB_HySA_2381;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1523:HG2_Ill_250bpfermikitraw_1655:HG2_Ill_GATKHCSBGrefine_811:HG2_Ill_GATKHC_1993:HG2_Ill_Krunchall_1687:HG2_Ill_SpiralSDKrefine_1200:HG2_Ill_manta_340:HG2_Ill_svaba_1502:HG4_Ill_150bpfermikitraw_1595:HG4_Ill_250bpfermikitraw_1632:HG4_Ill_GATKHCSBGrefine_833:HG4_Ill_GATKHC_1968:HG4_Ill_Krunchall_1756:HG4_Ill_manta_295:HG4_Ill_svaba_1501;NumExactMatchSVs=15;ClusterMaxShiftDist=0.119565;ClusterMaxSizeDiff=0.108696;ClusterMaxEditDist=0.287234;PBcalls=3;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=24240;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:225905172-225905183;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=386.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:23:0|1:30:1:1:26:1|0:0:15:14:0:0/1:26:26:./.:.:.:.:.:.
chr1	226415472	HG2_Ill_MetaSV_359	T	TTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAGCTCCTGACCTCAGGTCATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCTGGCCTTTACTTTTCAGGGTAGCAAATCCACCA	20	PASS	ClusterIDs=HG2_PB_pbsv_1218:HG4_PB_HySA_1858:HG3_PB_pbsv_1211:HG2_PB_assemblyticsPBcR_1833:HG4_PB_pbsv_1225:HG2_PB_HySA_2394:HG3_PB_HySA_1889:HG4_PB_SVrefine2PBcRDovetail_664:HG4_PB_SVrefine2Falcon1Dovetail_769:HG4_Ill_manta_299:HG4_Ill_SVrefine2DISCOVARDovetail_918:HG4_Ill_MetaSV_370:HG4_Ill_GATKHCSBGrefine_842:HG4_Ill_150bpfermikitraw_1597:HG3_PB_SVrefine2PBcRDovetail_665:HG3_PB_SVrefine2Falcon1Dovetail_757:HG3_Ill_manta_266:HG3_Ill_Spiral_1319:HG3_Ill_SVrefine2DISCOVARDovetail_872:HG3_Ill_MetaSV_343:HG3_Ill_GATKHCSBGrefine_838:HG2_PB_SVrefine2PBcRplusDovetail_806:HG2_PB_SVrefine2PB10Xhap12_986:HG2_PB_SVrefine2Falcon2Bionano_354:HG2_PB_SVrefine2Falcon1plusDovetail_839:HG2_Ill_SVrefine2DISCOVARplusDovetail_993:HG2_Ill_MetaSV_359:HG2_Ill_GATKHCSBGrefine_819:HG2_10X_SVrefine210Xhap12_951:HG2_PB_PB10Xdip_1134:HG2_Ill_breakscan11_3084;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_951:HG2_Ill_GATKHCSBGrefine_819:HG2_Ill_MetaSV_359:HG2_Ill_SVrefine2DISCOVARplusDovetail_993:HG2_PB_SVrefine2Falcon1plusDovetail_839:HG2_PB_SVrefine2Falcon2Bionano_354:HG2_PB_SVrefine2PB10Xhap12_986:HG2_PB_SVrefine2PBcRplusDovetail_806:HG3_Ill_GATKHCSBGrefine_838:HG3_Ill_MetaSV_343:HG3_Ill_SVrefine2DISCOVARDovetail_872:HG3_Ill_Spiral_1319:HG3_Ill_manta_266:HG3_PB_SVrefine2Falcon1Dovetail_757:HG3_PB_SVrefine2PBcRDovetail_665:HG4_Ill_150bpfermikitraw_1597:HG4_Ill_GATKHCSBGrefine_842:HG4_Ill_MetaSV_370:HG4_Ill_SVrefine2DISCOVARDovetail_918:HG4_Ill_manta_299:HG4_PB_SVrefine2Falcon1Dovetail_769:HG4_PB_SVrefine2PBcRDovetail_664;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0716612;ClusterMaxSizeDiff=0.0586319;ClusterMaxEditDist=0.250804;PBcalls=16;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=150;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=1:226415473-226415474;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:0:30:1:20:1/1:0:13:0:13:1/1:0:42:./.:.:.:.:.:.
chr1	227143273	HG2_PB_SVrefine2PB10Xhap12_989	G	GGTTCACACTCTCCCTGGCTCCCACTCTCCCTGGTTCACACTCTCCCTGGCTCCCACTCCCTGGTTCACACTCTCCCTGGCTCTCACTCTCCCT	10	PASS	ClusterIDs=HG2_PB_pbsv_1222:HG2_PB_HySA_2400:HG3_PB_HySA_1897:HG2_PB_PB10Xdip_1138:HG3_PB_SVrefine2PBcRDovetail_667:HG2_PB_SVrefine2PBcRplusDovetail_809:HG2_PB_SVrefine2PB10Xhap12_989:HG2_PB_SVrefine2Falcon2Bionano_357:HG3_PB_pbsv_1215;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_357:HG2_PB_SVrefine2PB10Xhap12_989:HG2_PB_SVrefine2PBcRplusDovetail_809:HG3_PB_SVrefine2PBcRDovetail_667;NumExactMatchSVs=4;ClusterMaxShiftDist=0.042328;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.209424;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=93;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=314;REFWIDENED=1:227143014-227143327;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:38:1/1:2:13:1:22:./.:1:11:3:12:./.:0:0:./.:.:.:.:.:.
chr1	227148092	HG2_PB_HySA_2401	A	AGGTGGTACTTGGTGGTGGTGGTGGTGCTTGGTGGTGGTGGTACTTGGTGGTGGTGGTGGTACTTGGTGGTGATGGTACTTGGTGGTGGTGGTACTTGGTGGTGGCAGTGGTACTTGGTGGTGGTACTTGGTGGTACTTGGTGGTGGTGGTGGTACTTGGTGGTGGCGGTGGTACTTGGTGGTGCTGGTGGTGCTTGGTGGTGGTGGTGGTACTTGGTGGTGGTGATGGTACTTGGTGGTGGTGGTGGTGGTACTTGGTGGTGGTACTTGGTGGTACTTGGTGGTGGTGGCGGTACTTGGTGGTGGTGGCGGTGGCACTTGGTGGTGGTGGTGCTTGGTGGTGGTGATGGTACTTGGTGGTGGTGATGGTACTTGGTGGTGGTGGTGGTGGTACTTGGTGGTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_759:HG2_PB_HySA_2401:HG2_PB_PB10Xdip_1139:HG4_PB_pbsv_1229:HG3_PB_pbsv_1216:HG4_PB_SVrefine2PBcRDovetail_666:HG3_PB_SVrefine2PBcRDovetail_668:HG2_PB_SVrefine2PBcRplusDovetail_810:HG4_PB_SVrefine2Falcon1Dovetail_772:HG2_PB_SVrefine2Falcon2Bionano_358:HG2_PB_SVrefine2PB10Xhap12_990;NumClusterSVs=11;ExactMatchIDs=HG2_PB_HySA_2401;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0959233;ClusterMaxSizeDiff=0.0959233;ClusterMaxEditDist=0.267658;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=402;DistBack=43;DistForward=96;DistMin=43;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=554;REFWIDENED=1:227147701-227148254;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9975;PctRecOverlap=0.995;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:0:17:0:20:./.:138:1189:136:1099:./.:0:0:1/1:0:80:.:.:.
chr1	228097233	HG2_PB_SVrefine2Falcon1plusDovetail_844	A	AGAAGAAAGAAGGGAGAGGAGGGAGTGAGGAGGGGAGGGAGAAGGGAAGAAGGAAGGAGGAGGGGAGGAAGGAGGGAAGGAGGGAGGAGGAGGGAAGGAGGGGAGGGAGGAGGGGAGGGAGTAAGGGAGGAAGGAGGGAAGGAAGGAGGGGAAGAGGTAAGGGAGGAAGGAGGGGAGGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_844:HG3_PB_SVrefine2PBcRDovetail_671:HG2_PB_SVrefine2PB10Xhap12_994:HG2_PB_SVrefine2PBcRplusDovetail_814:HG4_PB_SVrefine2Falcon1Dovetail_777:HG3_PB_SVrefine2Falcon1Dovetail_763:HG2_PB_SVrefine2Falcon2Bionano_361;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_844;NumExactMatchSVs=1;ClusterMaxShiftDist=0.235294;ClusterMaxSizeDiff=0.235294;ClusterMaxEditDist=0.235294;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=180;DistBack=-6;DistForward=-1;DistMin=-6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=444;REFWIDENED=1:228097234-228097677;PctSeqSimilarity=0.9027;PctSizeSimilarity=0.7333;PctRecOverlap=0.0884;SizeDiff=48;StartDistance=-141;EndDistance=-141;GTMatch=1;TruScore=57;MatchId=390.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:35:1/1:3:12:1:12:./.:15:18:7:28:./.:4:0:./.:.:.:.:.:.
chr1	228959918	HG4_Ill_MetaSV_379	T	TCTTTGTATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3085:HG2_PB_pbsv_1233:HG4_PB_SVrefine2Falcon1Dovetail_780:HG3_PB_pbsv_1224:HG4_Ill_MetaSV_379:HG3_PB_SVrefine2PBcRDovetail_674:HG2_PB_SVrefine2Falcon1plusDovetail_849:HG3_PB_SVrefine2Falcon1Dovetail_767:HG3_PB_assemblyticsfalcon_1847:HG3_PB_HySA_1918;NumClusterSVs=10;ExactMatchIDs=HG4_Ill_MetaSV_379;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0843373;ClusterMaxSizeDiff=0.0843373;ClusterMaxEditDist=0.192982;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=345;DistBack=25019;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:228959919-228959933;PctSeqSimilarity=0.9794;PctSizeSimilarity=0.9594;PctRecOverlap=0.9594;SizeDiff=14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=391.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:17:0|1:23:1:0:20:0|1:30:0:0:6:0/1:29:7:0/1:14:47:.:.:.
chr1	228982496	HG3_PB_SVrefine2Falcon1Dovetail_768	T	TATATATATATTTATATTTATATATATTTATATACATTTATATATTTATATATAAATATTATATATATTTATATATAAATATATATATTTATATAAATATTATATAATATTTATATATAAATATTATATATATTTATATATAAATATTATATATATTTATATATAAATATTATATAATATTTATATATAAATATTATATAATTTATATATAAATATTATATAATTTATATATAAATATTATATATATTTATATATAAATATTATATATATTTATATATAAATATTATATATATTTATACATATATTTATATATATTATATATTTTATATATTATATATTTAATATTTATATATTATATATTTTTATATATAATATATAATATGTATTATAAAATAATATATATAATATGTATTATAAAATAATATATAATATATATTATAAAATA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_675:HG3_PB_pbsv_1225:HG4_PB_pbsv_1243:HG2_PB_pbsv_1234:HG3_PB_SVrefine2Falcon1Dovetail_768:HG4_PB_SVrefine2Falcon1Dovetail_781:HG3_Ill_SVrefine2DISCOVARDovetail_881;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_768;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0603352;ClusterMaxSizeDiff=0.0469274;ClusterMaxEditDist=0.199105;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=444;DistBack=17250;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=1:228982497-228982794;PctSeqSimilarity=0.9777;PctSizeSimilarity=0.9978;PctRecOverlap=0.8427;SizeDiff=-1;StartDistance=-70;EndDistance=-70;GTMatch=0;TruScore=93;MatchId=392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:56:0|1:42:5:0:52:./.:4:0:0:2:0/1:18:5:0/1:4:30:.:.:.
chr1	230006661	HG2_10X_SVrefine210Xhap12_962	T	TACATACAACACACACACAACACACAACACACAACATACACATAACAACACACATATATACACAACACACAGAACACATACACATAACACAACATACATATGCATACAATACAGGTAACAATATACATAAACAACACAGAAACATACATATAACACAACACATGTATACATACAATACACATGACATGCAACACACAACACACATGACACACACAGCACACAACACAATACATATGCCTACAACACACACCTGCACACATAACACAGGTGAAACACATGCAAACACATATACACTCAAC	20	PASS	ClusterIDs=HG2_PB_pbsv_1236:HG3_PB_SVrefine2PBcRDovetail_677:HG3_PB_pbsv_1228:HG3_Ill_SVrefine2DISCOVARDovetail_885:HG2_Ill_MetaSV_368:HG2_10X_SVrefine210Xhap12_963:HG2_PB_SVrefine2PBcRplusDovetail_818:HG4_PB_pbsv_1244:HG3_Ill_GATKHCSBGrefine_851:HG4_Ill_MetaSV_380:HG4_Ill_GATKHCSBGrefine_855:HG3_Ill_MetaSV_351:HG2_Ill_breakscan11_3086:HG2_PB_PB10Xdip_1149:HG2_PB_SVrefine2Falcon2Bionano_365:HG2_PB_SVrefine2Falcon1plusDovetail_851:HG4_PB_SVrefine2PBcRDovetail_674:HG4_PB_SVrefine2Falcon1Dovetail_783:HG4_Ill_SVrefine2DISCOVARDovetail_935:HG3_PB_SVrefine2Falcon1Dovetail_771:HG2_PB_SVrefine2PB10Xhap12_1001:HG2_Ill_SVrefine2DISCOVARplusDovetail_1005:HG2_10X_SVrefine210Xhap12_962;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_962:HG2_Ill_SVrefine2DISCOVARplusDovetail_1005:HG2_PB_SVrefine2PB10Xhap12_1001:HG3_PB_SVrefine2Falcon1Dovetail_771:HG4_Ill_SVrefine2DISCOVARDovetail_935:HG4_PB_SVrefine2Falcon1Dovetail_783:HG4_PB_SVrefine2PBcRDovetail_674;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0662252;ClusterMaxSizeDiff=0.0660066;ClusterMaxEditDist=0.250804;PBcalls=12;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=298;DistBack=75251;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=110;REFWIDENED=1:230006662-230006771;PctSeqSimilarity=0.9983;PctSizeSimilarity=1;PctRecOverlap=0.9866;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=393.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:6:0:8:1/1:0:47:1:45:1/1:0:32:./.:.:.:.:.:.
chr1	230107607	HG3_PB_SVrefine2PBcRDovetail_678	A	ACTCATACATGCTAACTCCCCCCACACTGCACACATATACCACACACACATGCATACACACACCTCACAACCCCACATATGCATACACGCACACACCCCACCATGTACATACACACAGCCCACAAACATACACACACCCCATCCACATACATACATCCCACTCACATGTACATACACATGCACTCCACCCACATATATACACCTCACACACATACATCCACACACCATCCTCACATAAATACATCCACACCACACC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_675:HG3_PB_HySA_1932:HG2_PB_pbsv_1237:HG4_PB_pbsv_1245:HG2_PB_HySA_2437:HG4_Ill_manta_302:HG4_Ill_MetaSV_381:HG4_Ill_GATKHCSBGrefine_856:HG3_Ill_manta_271:HG3_Ill_MetaSV_352:HG3_Ill_GATKHCSBGrefine_852:HG2_Ill_manta_349:HG2_Ill_MetaSV_369:HG2_Ill_GATKHCSBGrefine_831:HG2_PB_PB10Xdip_1150:HG2_Ill_breakscan11_3087:HG3_PB_pbsv_1229:HG4_PB_SVrefine2Falcon1Dovetail_784:HG4_Ill_SVrefine2DISCOVARDovetail_936:HG3_PB_SVrefine2PBcRDovetail_678:HG3_PB_SVrefine2Falcon1Dovetail_772:HG3_Ill_SVrefine2DISCOVARDovetail_888:HG2_PB_SVrefine2PBcRplusDovetail_819:HG2_PB_SVrefine2PB10Xhap12_1002:HG2_PB_SVrefine2Falcon2Bionano_366:HG2_PB_SVrefine2Falcon1plusDovetail_852:HG2_Ill_SVrefine2DISCOVARplusDovetail_1007:HG2_10X_SVrefine210Xhap12_965;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_965:HG2_Ill_SVrefine2DISCOVARplusDovetail_1007:HG2_PB_SVrefine2Falcon1plusDovetail_852:HG2_PB_SVrefine2Falcon2Bionano_366:HG2_PB_SVrefine2PB10Xhap12_1002:HG2_PB_SVrefine2PBcRplusDovetail_819:HG3_Ill_SVrefine2DISCOVARDovetail_888:HG3_PB_SVrefine2Falcon1Dovetail_772:HG3_PB_SVrefine2PBcRDovetail_678:HG4_Ill_SVrefine2DISCOVARDovetail_936:HG4_PB_SVrefine2Falcon1Dovetail_784;NumExactMatchSVs=11;ClusterMaxShiftDist=0.077821;ClusterMaxSizeDiff=0.0700389;ClusterMaxEditDist=0.277567;PBcalls=14;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=255;DistBack=18025;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=214;REFWIDENED=1:230107608-230107821;PctSeqSimilarity=0.9661;PctSizeSimilarity=0.9725;PctRecOverlap=0.3569;SizeDiff=7;StartDistance=-161;EndDistance=-161;GTMatch=0;TruScore=76;MatchId=394.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:70:1/1:2:15:1:11:1/1:1:142:1:75:1/1:0:11:./.:.:.:.:.:.
chr1	230467786	HG2_PB_SVrefine2Falcon2Bionano_367	A	ACACACCACACACACACACACCATACCCATAACATAGACATGCACGTGTATACACACCACACAAACATACAGACTACACACACAACACTATGTAAACATACATATACACACACCACACAGACCACACACACACCATGCCCATAACATAGACAAACACGTGTATACACACCACACAACATACAGACCACACACACCATACAAACTTACCACACAACAATACACACACACCACACCCACCATACCACACATACCATACCACATACACACTCCACACCACAGTACACCACACCAATATAGACACACACCACACCCACTATACCACACATACCATACCACATACACACTCCACACCACAGTACACCGCGCCAATATATACACACACCACACCCACCATACCACAAATACATATCACATACACACTCCACACCAAATATATACACACGCACATCACAGAAACATACGTATCACATACTCCACACCGCATACAACACACCAACATAGACACACACACCACACCCACCATACCACACATACCATACCACATACACACTCCACACCACAGTACACACCAATATATACACACACACTGCAGCCACCATACCACAAATACATATCACATCCACACTCCACACCACACACACAAATATATACACACATGTCACAGAAACATACATATCACATACTCCACACCACATACAACACACCAACATACACACACACCACACCCACCATACCACACATACCATACCACATACACACTCCACACCACAGTACACCACACCAATATAGACACACACACCACACCCACCATACTACAAATACATATCACATCCACACTCCACACCACACAAATATATACACACGTCACAGAAACATACATATCACATTCTCCACACCGCATACAACACACCAACATACACACACACACCGCACCCACCATACCACACATACCATACCACATACACACTCCACACCACAGTACACCACACCAATATATACACACACACCACACACACCATGCCACCAAAAATACATATCACATACACACTC	20	PASS	ClusterIDs=HG4_PB_pbsv_1247:HG2_PB_pbsv_1238:HG4_PB_assemblyticsfalcon_1810:HG2_PB_assemblyticsPBcR_1869:HG2_PB_PB10Xdip_1151:HG4_PB_HySA_1896:HG4_PB_SVrefine2Falcon1Dovetail_785:HG2_PB_SVrefine2PB10Xhap12_1003:HG4_PB_SVrefine2PBcRDovetail_676:HG4_Ill_SVrefine2DISCOVARDovetail_937:HG2_PB_SVrefine2Falcon2Bionano_367:HG2_PB_SVrefine2PBcRplusDovetail_820:HG4_Ill_MetaSV_382:HG3_PB_SVrefine2PBcRDovetail_679:HG2_Ill_SVrefine2DISCOVARplusDovetail_1008:HG3_Ill_SVrefine2DISCOVARDovetail_889:HG2_PB_SVrefine2Falcon1plusDovetail_853:HG3_PB_SVrefine2Falcon1Dovetail_773:HG2_PB_HySA_2441;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_367:HG4_Ill_SVrefine2DISCOVARDovetail_937:HG4_PB_SVrefine2PBcRDovetail_676;NumExactMatchSVs=3;ClusterMaxShiftDist=0.126923;ClusterMaxSizeDiff=0.126923;ClusterMaxEditDist=0.193517;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=1049;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=1:230467787-230467799;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9981;PctRecOverlap=0.9981;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=395.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:1:34:0:16:1/1:0:60:0:45:1/1:0:29:1/1:8:172:.:1201:.
chr1	231085150	HG2_Ill_GATKHCSBGrefine_833	T	TAAAAAAAAAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_1240:HG3_PB_pbsv_1234:HG2_PB_SVrefine2Falcon2Bionano_368:HG3_PB_SVrefine2PBcRDovetail_680:HG3_Ill_MetaSV_353:HG2_Ill_GATKHCSBGrefine_833:HG2_10X_SVrefine210Xhap12_969:HG3_PB_SVrefine2Falcon1Dovetail_774:HG2_PB_HySA_2449;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_969:HG2_Ill_GATKHCSBGrefine_833:HG3_Ill_MetaSV_353:HG3_PB_SVrefine2PBcRDovetail_680;NumExactMatchSVs=4;ClusterMaxShiftDist=0.057508;ClusterMaxSizeDiff=0.057508;ClusterMaxEditDist=0.147799;PBcalls=6;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=304;DistBack=53461;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=1:231085151-231085161;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=396.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:25:0|1:27:0:3:33:./.:4:0:0:10:./.:31:3:0/1:7:49:.:.:.
chr1	231146746	HG4_Ill_SVrefine2DISCOVARDovetail_940	T	TAGATTGAGTAATGTTGGCGTACAGTGAGTGATGATGGTGTAGACTGAGTGATAATTGTGCAGATTGAGTGATGATGGCATAGGCTGAGTGACGATGGTGCACATTGAGTGATGATTGTGTAGAATGAGTGATGATGGCATACATTCAGTGATGATAGCACAGATTGAGTGATGATATTGCAGACTGAGTGATGATTGTGTAGACTGAGTGATGATGGTGTACATTGAGTGCTGATAGCACAGACTGAGTTATGATAATGCAGACTGAGTGATGATCATGTAGACTGAGTGATGATGGCATACATTCAGTGATGATAGCACACATTGAGTGATGATAGGGCAGATTGAGTGATGATGGTGTACATTGAGTGATGATGCTGTACATTGAGTAATGATAGCACAGATTGAGTGATGATAGTGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1010:HG4_PB_HySA_1908:HG2_PB_HySA_2450:HG4_Ill_MetaSV_383:HG4_Ill_manta_304:HG2_Ill_MetaSV_370:HG2_Ill_GATKHCSBGrefine_835:HG3_Ill_MetaSV_354:HG3_PB_HySA_1941:HG2_PB_pbsv_1241:HG2_PB_PB10Xdip_1153:HG4_PB_pbsv_1251:HG2_PB_SVrefine2Falcon1plusDovetail_854:HG3_PB_pbsv_1235:HG4_PB_SVrefine2PBcRDovetail_678:HG4_Ill_SVrefine2DISCOVARDovetail_940:HG2_PB_SVrefine2Falcon2Bionano_369:HG2_10X_SVrefine210Xhap12_970:HG4_PB_SVrefine2Falcon1Dovetail_788:HG3_PB_SVrefine2Falcon1Dovetail_775:HG2_PB_SVrefine2PBcRplusDovetail_821:HG2_PB_SVrefine2PB10Xhap12_1004:HG3_PB_SVrefine2PBcRDovetail_681:HG3_Ill_SVrefine2DISCOVARDovetail_890;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_970:HG2_PB_SVrefine2Falcon2Bionano_369:HG4_Ill_SVrefine2DISCOVARDovetail_940:HG4_PB_SVrefine2PBcRDovetail_678;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0607477;ClusterMaxSizeDiff=0.0607477;ClusterMaxEditDist=0.221968;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=420;DistBack=2818;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=637;REFWIDENED=1:231146747-231147383;PctSeqSimilarity=0.9636;PctSizeSimilarity=0.9857;PctRecOverlap=0.4513;SizeDiff=6;StartDistance=-228;EndDistance=-228;GTMatch=0;TruScore=80;MatchId=397.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:83:1/1:5:40:0:37:1/1:2:36:1:31:1/1:0:10:0/1:6:36:.:.:.
chr1	231257546	HG3_Ill_SVrefine2DISCOVARDovetail_892	A	ATTAAATAAATGTAATTTAATTAAATAATAAATTTAATTAAAAATGAATTTAATTAAATAAATTTAATTAAAAATGAATTTAATTAAATAAATTTAATTAAAAATGAATTTAATTAAATAAATTTAATTAAAAATGAATTTAATTAAATAAATTTAATTAAAAATGAATTTAATTAAATAAATTTAATTAAAAATGAATTTAATTAAATGAATTTAATTAAAAATGAATTTAATTAAATGAATTTAATTAAAAATGAATTTAATTAAATGAATTTAATTAAAAATGAATTTAATTAAATGAATTTAATTAAAATGAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1007:HG3_PB_pbsv_1238:HG4_Ill_SVrefine2DISCOVARDovetail_942:HG2_PB_pbsv_1245:HG4_PB_SVrefine2PBcRDovetail_681:HG4_PB_HySA_1910:HG4_PB_pbsv_1255:HG2_PB_SVrefine2Falcon1plusDovetail_857:HG2_PB_SVrefine2PB10Xhap12_1008:HG3_PB_SVrefine2PBcRDovetail_683:HG2_PB_SVrefine2PBcRplusDovetail_824:HG3_PB_SVrefine2Falcon1Dovetail_779:HG4_PB_SVrefine2Falcon1Dovetail_792:HG3_Ill_SVrefine2DISCOVARDovetail_892:HG2_PB_SVrefine2Falcon2Bionano_372:HG2_Ill_SVrefine2DISCOVARplusDovetail_1013;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1013:HG2_PB_SVrefine2Falcon2Bionano_372:HG3_Ill_SVrefine2DISCOVARDovetail_892:HG4_PB_SVrefine2Falcon1Dovetail_792;NumExactMatchSVs=4;ClusterMaxShiftDist=0.229846;ClusterMaxSizeDiff=0.229846;ClusterMaxEditDist=0.384749;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=69324;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=248;REFWIDENED=1:231257547-231257794;PctSeqSimilarity=0.9661;PctSizeSimilarity=0.9845;PctRecOverlap=0.1084;SizeDiff=-5;StartDistance=-285;EndDistance=-285;GTMatch=1;TruScore=68;MatchId=398.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:1/1:1:32:1:36:./.:2:0:0:2:0/1:12:18:./.:1:6:.:.:.
chr1	231526838	HG2_10X_SVrefine210Xhap12_974	T	TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGACAGGGAACTCATTCTGTTGCCCAGGCTGGTCTCAAACTCATGGGCTCACCACGACCGACGCGTGTGTGTGTGTGTGAGAGAGACAGGGAACTCATTCTGTTGTGTG	20	PASS	ClusterIDs=HG4_PB_HySA_1912:HG3_Ill_MetaSV_356:HG4_PB_assemblyticsfalcon_1833:HG2_PB_assemblyticsPBcR_1889:HG3_PB_SVrefine2Falcon1Dovetail_781:HG2_Ill_SVrefine2DISCOVARplusDovetail_1015:HG2_10X_SVrefine210Xhap12_974:HG2_PB_SVrefine2PBcRplusDovetail_826:HG2_PB_SVrefine2PB10Xhap12_1010:HG2_PB_SVrefine2Falcon2Bionano_374:HG4_Ill_SVrefine2DISCOVARDovetail_943:HG4_PB_SVrefine2PBcRDovetail_682:HG2_PB_SVrefine2Falcon1plusDovetail_859:HG4_PB_SVrefine2Falcon1Dovetail_794:HG3_PB_SVrefine2PBcRDovetail_685:HG4_PB_pbsv_1257:HG2_PB_pbsv_1247;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_974:HG2_Ill_SVrefine2DISCOVARplusDovetail_1015;NumExactMatchSVs=2;ClusterMaxShiftDist=0.106667;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.36;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=151;DistBack=6;DistForward=91;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=148;REFWIDENED=1:231526784-231526931;PctSeqSimilarity=0.9274;PctSizeSimilarity=0.9735;PctRecOverlap=0.7947;SizeDiff=4;StartDistance=29;EndDistance=29;GTMatch=0;TruScore=89;MatchId=399.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:./.:0:0:0:38:./.:3:28:1:37:./.:0:5:./.:.:.:.:.:.
chr1	232252192	HG3_PB_SVrefine2PBcRDovetail_686	A	AGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCTATCTTGGCTCACTGCAACCTTTACCTCTTGGGTTCAAGCGATTCTCCTGCCTCAACCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTTTCTATTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCGCCTGGGCCCCTATGTTTAACTTTGAGGCTCCACCAAACTGTTTTCCACAGCAGCTGCACCATTTCACATTCTCACCAGTAACATATGAGGGTTCCAATTGTTTTACATGTTCACTAACACTTTTGGTTAGTTATTTTTTATTTTATTTTATTTACTTATCTTTTGAGATG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_975:HG2_PB_HySA_2471:HG4_PB_pbsv_1262:HG4_Ill_MetaSV_384:HG3_PB_pbsv_1244:HG3_Ill_MetaSV_357:HG2_Ill_MetaSV_371:HG4_PB_HySA_1924:HG2_PB_PB10Xdip_1173:HG2_PB_pbsv_1253:HG3_PB_HySA_1951:HG3_PB_SVrefine2Falcon1Dovetail_782:HG4_PB_SVrefine2PBcRDovetail_684:HG4_PB_SVrefine2Falcon1Dovetail_795:HG4_Ill_SVrefine2DISCOVARDovetail_945:HG3_PB_SVrefine2PBcRDovetail_686:HG3_Ill_SVrefine2DISCOVARDovetail_895:HG2_PB_SVrefine2PBcRplusDovetail_829:HG2_PB_SVrefine2PB10Xhap12_1015:HG2_Ill_SVrefine2DISCOVARplusDovetail_1016;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_975:HG4_PB_SVrefine2PBcRDovetail_684:HG4_PB_SVrefine2Falcon1Dovetail_795:HG4_Ill_SVrefine2DISCOVARDovetail_945:HG3_PB_SVrefine2PBcRDovetail_686:HG3_Ill_SVrefine2DISCOVARDovetail_895:HG2_PB_SVrefine2PBcRplusDovetail_829:HG2_PB_SVrefine2PB10Xhap12_1015:HG2_Ill_SVrefine2DISCOVARplusDovetail_1016;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0559284;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.234907;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=439;DistBack=912;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=256;REFWIDENED=1:232252193-232252448;PctSeqSimilarity=0.9892;PctSizeSimilarity=1;PctRecOverlap=0.8405;SizeDiff=0;StartDistance=-70;EndDistance=-70;GTMatch=0;TruScore=94;MatchId=400.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:0:19:0:14:1/1:1:10:0:8:1/1:0:27:1/1:3:40:.:.:.
chr1	232447858	HG2_Ill_Cortex_571	G	GGACATTATGACAGAATTTGAACCATTATAGGAATTTCTTCAGGTGATTCACATAGTTAAAATTATATTTTGAAAGTATCCTGT	20	PASS	ClusterIDs=HG4_PB_pbsv_1264:HG2_PB_pbsv_1255:HG2_PB_HySA_2475:HG4_PB_assemblyticsfalcon_1838:HG4_Ill_svaba_1570:HG4_Ill_manta_308:HG4_Ill_Krunchall_1819:HG4_Ill_GATKHCSBGrefine_868:HG4_Ill_Cortex_272:HG4_Ill_150bpfermikitraw_1649:HG3_PB_assemblyticsfalcon_1892:HG2_Ill_svaba_1563:HG2_Ill_manta_355:HG2_Ill_SpiralSDKrefine_1245:HG2_Ill_Krunchall_1739:HG2_Ill_GATKHCSBGrefine_842:HG2_Ill_Cortex_571:HG2_Ill_250bpfermikitraw_1708:HG2_Ill_150bpfermikitraw_1571:HG2_Ill_breakscan11_3090;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1571:HG2_Ill_250bpfermikitraw_1708:HG2_Ill_Cortex_571:HG2_Ill_GATKHCSBGrefine_842:HG2_Ill_Krunchall_1739:HG2_Ill_SpiralSDKrefine_1245:HG2_Ill_manta_355:HG2_Ill_svaba_1563:HG3_PB_assemblyticsfalcon_1892:HG4_Ill_150bpfermikitraw_1649:HG4_Ill_Cortex_272:HG4_Ill_GATKHCSBGrefine_868:HG4_Ill_Krunchall_1819:HG4_Ill_manta_308:HG4_Ill_svaba_1570;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0813954;ClusterMaxSizeDiff=0.0697674;ClusterMaxEditDist=0.169492;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=83;DistBack=4;DistForward=2229;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=1:232447859-232447860;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:37:0|1:32:7:2:26:1|0:0:29:25:0:0/1:27:17:./.:.:.:.:.:.
chr1	232504844	HG3_Ill_GATKHC_2107	G	GTCTCTGTCTCTTTCTCTCTCACTCAGCTAGCTTCCCTCTCATTTTTACCTCTTCCTGCCTTCTGTCTGTCCATCCATACATCTCTCTC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_898:HG4_PB_pbsv_1267:HG4_PB_HySA_1928:HG2_PB_pbsv_1258:HG4_PB_assemblyticsfalcon_1842:HG3_PB_assemblyticsfalcon_1894:HG2_PB_assemblyticsPBcR_1902:HG4_PB_SVrefine2Falcon1Dovetail_799:HG2_PB_HySA_2481:HG2_PB_PB10Xdip_1180:HG4_PB_SVrefine2PBcRDovetail_687:HG4_Ill_250bpfermikitraw_1694:HG3_PB_SVrefine2Falcon1Dovetail_786:HG2_PB_SVrefine2Falcon2Bionano_377:HG4_Ill_GATKHC_2045:HG4_Ill_GATKHCSBGrefine_870:HG3_Ill_GATKHC_2107:HG3_Ill_GATKHCSBGrefine_862:HG2_PB_SVrefine2PBcRplusDovetail_833:HG2_PB_SVrefine2PB10Xhap12_1022:HG2_PB_SVrefine2Falcon1plusDovetail_866:HG2_Ill_GATKHC_2066:HG2_Ill_GATKHCSBGrefine_845:HG2_Ill_250bpfermikitraw_1711:HG4_Ill_Krunchall_1823:HG4_Ill_SVrefine2DISCOVARDovetail_948;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1711:HG2_Ill_GATKHCSBGrefine_845:HG2_Ill_GATKHC_2066:HG2_PB_SVrefine2Falcon1plusDovetail_866:HG2_PB_SVrefine2PB10Xhap12_1022:HG2_PB_SVrefine2PBcRplusDovetail_833:HG3_Ill_GATKHCSBGrefine_862:HG3_Ill_GATKHC_2107:HG4_Ill_GATKHCSBGrefine_870:HG4_Ill_GATKHC_2045;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0765027;ClusterMaxEditDist=0.315217;PBcalls=15;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=88;DistBack=495;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=148;REFWIDENED=1:232504788-232504935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=402.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:55:1/1:3:25:3:24:./.:4:17:1:21:1/1:1:26:./.:.:.:.:.:.
chr1	232861200	HG4_PB_SVrefine2Falcon1Dovetail_801	AG	GGAGGGGAGGGGGGAGGGAGGGGGAGGGGGGGAGGGAGAGGGGGGGGGAGGGGAGGGGAGGGGGAGGGGAGGGAGGGGAGGGGAGGGGGGAGGGGAGGGGAGGGGAGGGGAGGGAGGGGAGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_835:HG2_PB_assemblyticsPBcR_1904:HG4_PB_assemblyticsfalcon_1843:HG4_PB_SVrefine2Falcon1Dovetail_801:HG2_PB_SVrefine2Falcon2Bionano_379:HG2_PB_SVrefine2PB10Xhap12_1025:HG4_PB_SVrefine2PBcRDovetail_689:HG4_PB_assemblyticsfalcon_1844:HG4_PB_SVrefine2Falcon1Dovetail_800;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_801:HG4_PB_assemblyticsfalcon_1843;NumExactMatchSVs=2;ClusterMaxShiftDist=0.378378;ClusterMaxSizeDiff=0.378378;ClusterMaxEditDist=0.378378;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=122;DistBack=59;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=203;REFWIDENED=1:232861003-232861205;PctSeqSimilarity=0.8871;PctSizeSimilarity=0.7135;PctRecOverlap=0.4327;SizeDiff=-49;StartDistance=73;EndDistance=74;GTMatch=1;TruScore=67;MatchId=403.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:38:1/1:6:17:2:16:./.:3:0:0:0:./.:4:0:./.:.:.:.:.:.
chr1	232869262	HG4_Ill_MetaSV_389	G	GTAATACCAGCATTTTGGGAGGCCAAGGCAGGTGGACCAGCTGAGGTCAAAAGATCAAGTCCATCCTGGCCAACATGGTGAAGCCTGGTCTCTACTAAAAATACAAAAATCAGCTGGGTGTGGTGGCGTGTGCCCGTGGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGCGACAGAATGAGACTCCATCTCAAAAAAAAAAAAAAAATTCTCTAGAGTTTCTTTTTACCATTAGGATATATCCCACTTGGGACAGTCAGTCAAGTTACTGTATTTTAAATCACTTGAAATACTTTAACCCTTGTGTGGTTAAGTGGCTATTTATTTTTAACCCTCTGAAAAAGAATTGTTTTTGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3091:HG4_PB_pbsv_1271:HG3_PB_pbsv_1248:HG2_PB_pbsv_1261:HG4_PB_assemblyticsfalcon_1845:HG3_PB_assemblyticsfalcon_1895:HG2_PB_assemblyticsPBcR_1905:HG2_PB_PB10Xdip_1181:HG4_PB_HySA_1930:HG3_PB_HySA_1955:HG2_PB_HySA_2484:HG4_PB_SVrefine2Falcon1Dovetail_802:HG4_Ill_manta_311:HG4_Ill_MetaSV_389:HG3_PB_SVrefine2Falcon1Dovetail_787:HG3_Ill_SVrefine2DISCOVARDovetail_899:HG3_Ill_MetaSV_360:HG3_Ill_GATKHCSBGrefine_863:HG2_PB_SVrefine2PBcRplusDovetail_836:HG2_PB_SVrefine2Falcon1plusDovetail_868:HG2_Ill_manta_357:HG2_Ill_MetaSV_375:HG4_PB_SVrefine2PBcRDovetail_690:HG4_Ill_SVrefine2DISCOVARDovetail_952:HG4_Ill_GATKHCSBGrefine_873:HG2_PB_SVrefine2PB10Xhap12_1026:HG2_Ill_SVrefine2DISCOVARplusDovetail_1019:HG2_Ill_GATKHCSBGrefine_847:HG2_10X_SVrefine210Xhap12_983:HG2_PB_SVrefine2Falcon2Bionano_380;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_MetaSV_375:HG2_Ill_manta_357:HG2_PB_SVrefine2Falcon1plusDovetail_868:HG2_PB_SVrefine2PBcRplusDovetail_836:HG3_Ill_GATKHCSBGrefine_863:HG3_Ill_MetaSV_360:HG3_Ill_SVrefine2DISCOVARDovetail_899:HG3_PB_SVrefine2Falcon1Dovetail_787:HG4_Ill_MetaSV_389:HG4_Ill_manta_311:HG4_PB_SVrefine2Falcon1Dovetail_802;NumExactMatchSVs=11;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.160452;PBcalls=17;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=420;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:232869263-232869263;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:78:1/1:4:30:0:25:./.:0:11:0:4:1/1:0:27:1/1:2:46:.:.:.
chr1	234070552	HG2_Ill_GATKHCSBGrefine_853	T	TAAACAATGTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3093:HG4_PB_pbsv_1276:HG4_Ill_MetaSV_392:HG2_PB_pbsv_1267:HG4_PB_assemblyticsfalcon_1851:HG3_PB_assemblyticsfalcon_1901:HG4_PB_SVrefine2Falcon1Dovetail_805:HG4_Ill_GATKHCSBGrefine_879:HG2_Ill_GATKHCSBGrefine_853:HG2_PB_SVrefine2Falcon1plusDovetail_873:HG3_PB_SVrefine2Falcon1Dovetail_789:HG4_PB_HySA_1938:HG4_PB_SVrefine2PBcRDovetail_695;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_853:HG4_Ill_GATKHCSBGrefine_879;NumExactMatchSVs=2;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.193939;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=30366;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=1:234070553-234070564;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=406.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:30:1|0:1:25:38:0:1|0:0:10:27:0:0/1:19:10:0/1:5:40:.:.:.
chr1	234444323	HG2_PB_SVrefine2Falcon2Bionano_386	T	TCCCCAGAGTATCCATCCTCCTCCATTACCGTCCTTCTCCCACAACCCCCACCCCCAGAGTATCCATCCTCCTCCATTACCGTCCTTCTCCCACAACCCCCAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_875:HG3_PB_HySA_1970:HG2_PB_pbsv_1273:HG2_PB_HySA_2502:HG3_PB_pbsv_1257:HG2_PB_PB10Xdip_1193:HG4_PB_HySA_1944:HG4_PB_SVrefine2Falcon1Dovetail_808:HG4_Ill_SVrefine2DISCOVARDovetail_965:HG3_PB_SVrefine2PBcRDovetail_691:HG2_PB_SVrefine2PBcRplusDovetail_842:HG2_PB_SVrefine2PB10Xhap12_1036:HG2_PB_SVrefine2Falcon2Bionano_386:HG3_PB_SVrefine2Falcon1Dovetail_793;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_386:HG2_PB_SVrefine2PB10Xhap12_1036:HG2_PB_SVrefine2PBcRplusDovetail_842:HG3_PB_SVrefine2PBcRDovetail_691:HG4_Ill_SVrefine2DISCOVARDovetail_965:HG4_PB_SVrefine2Falcon1Dovetail_808;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0574163;ClusterMaxSizeDiff=0.0478469;ClusterMaxEditDist=0.202899;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=102;DistBack=33242;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=156;REFWIDENED=1:234444324-234444479;PctSeqSimilarity=0.9967;PctSizeSimilarity=1;PctRecOverlap=0.534;SizeDiff=0;StartDistance=-48;EndDistance=-48;GTMatch=0;TruScore=84;MatchId=407.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:1/1:0:11:0:21:./.:3:1:4:0:./.:2:1:./.:.:.:.:.:.
chr1	234805712	HG2_PB_SVrefine2PB10Xhap12_1039	T	TTGATTATATGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3094:HG4_PB_pbsv_1285:HG4_PB_assemblyticsfalcon_1864:HG2_PB_pbsv_1277:HG2_PB_HySA_2507:HG3_PB_pbsv_1261:HG3_PB_HySA_1974:HG3_PB_assemblyticsfalcon_1915:HG2_PB_assemblyticsPBcR_1925:HG4_PB_HySA_1946:HG4_PB_SVrefine2Falcon1Dovetail_811:HG2_PB_PB10Xdip_1196:HG3_PB_SVrefine2Falcon1Dovetail_796:HG2_PB_SVrefine2PBcRplusDovetail_845:HG2_PB_SVrefine2PB10Xhap12_1039:HG2_PB_SVrefine2Falcon2Bionano_389:HG2_PB_SVrefine2Falcon1plusDovetail_877:HG4_PB_SVrefine2PBcRDovetail_698:HG4_Ill_GATKHCSBGrefine_883:HG2_10X_SVrefine210Xhap12_993;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_877:HG2_PB_SVrefine2Falcon2Bionano_389:HG2_PB_SVrefine2PB10Xhap12_1039:HG2_PB_SVrefine2PBcRplusDovetail_845;NumExactMatchSVs=4;ClusterMaxShiftDist=0.146927;ClusterMaxSizeDiff=0.146927;ClusterMaxEditDist=0.225392;PBcalls=17;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=331;DistBack=6728;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=1:234805713-234805728;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=408.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:9:0:15:1/1:0:7:0:7:1/1:0:27:1/1:2:54:.:.:.
chr1	235573072	HG2_PB_SVrefine2Falcon1plusDovetail_880	C	CGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAAGCCGAGGTGGGCGGATCACTTGAGGTCAGGAGTTCGAGACCAGTCTGTCCAACATGACGAAACCCGTGTCTACTAAAAATGCAAAACTTAGCCGGGCGTGGTGGTGGGCACCCATAATCCCAGCTACTTGGGAGGCTGAAGCACGAGAATCGCTTGAACCCAGGAGACAGAGGTTGCAGTCAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAAAAATAAATAAACAAATAAATAAAAAGTGTAAATTTAGGACAGAAATGCAAACCATGATATTTTCATTTTGCATTGTTTTCTCATTTATCGTTATTATAAATGTATTAGTTGAGCTTTTACACTTTTTCACTGAAATCAAATAATGTTTGAAAAATAAATTTTTCTATTTCTAGTTCCACCACCCCATGTTACTCCTCTAAGGAAAACCGATACTATTTCATAAACTATTTCAGTACGAAATTTAATTTCTAAAATTTCAGATGTCACTATTTCATAAAAAAAAATCTATTTTATTAATGAGACTCTAGAAACAGTTTATTAGATGCAAAACTTATTTGTACACATTTACATAGATTAAGGTACATAAGCAAACAAATACAAATTGTCTGGAGCTATTTTTCTAACACCTAGTAACGTGCCTGAGGATTTATTTCACCTTCTTACACATAAAGTGTTTAACATTAATAATTAATTGATAGTAAACACAAGATCTATTTGTATGGTGCCATATTAGAAAATTAAAGGAGGCCGGGCACAGTGGCTTAAGCCTGTAGTCCCAGTGCTATGGGAGGCCTAGGCGGAAGGACCACTTGGGCCAGGAGTTTGAGACCAGCCTGGTCAACATAGTGAGACCCCATCTCTACCAAAAATGTAAATAAAAAAAGGAGATCACCTAGAAGTGATCTTCGTAATTTCCTTCAGAAAACGCACCTCTGTTTAAACCATAAAATCTTATTTAAAATGTTACAGCTTTCATAAATGTTTTATTTTCAGTAGCACTGCTTTTGCTCTGCTATTTTTTGTTTTTGTAGGTATTTTTATGTAGGATCCTGTTTGATGCCTATGGTAGGACAAAAGTACAGCTGCTTTTTTTTTTTTCACCAAACTCCTACTCATCCTTAAAGACCCAGCTCAGATTCTCCATCTTTTCAGAATATACTCAAGGTCAGGGACTTTTGTTGTGCAATGGATCCTTTTGGCAGGCATAAAATAATACTTTTAAAAGCAGGAAATAAATATATTACAAAGGAAATAGTTACATTGAAATATAGTGATCAGAATATTTTTAAGAATTGATATATACGTGGGAGAATATGCATGGGAAAAATTGATACAGTAATATATGTCTTTATTAAATAACATTAAATGATAAGATCTACCAGTTGGTCTAATAACTACTAAATTTTGAAGCAATCATGAGAGTAAGTGATCTTTTAAAAAATATCTGCCACAAGTGTAAAGTAATAGGAAAATATCTTTGATTTCCATTGGTGACAAAATGCTGTAAATCTTATCCTAGTTTGTTGCCTGAATTTATGAGTAAAGACAATGTTGAATTTTGATAAGAGATTAGTGAAAATAACAATTCACCTTCCTCATCTGTCTCAGTTAGCTATTGCTGCATACCGTACATCTTGGAAGTTTTTGCTCACAAATTTTAAAATAATCATTTGTTTTGTTCCTCCCCACTTTGAAATCTGTGACTTGAAGGAGTTCAGGTGTGGTTGTCTCTGCTGTGCACATGTGGCCTGCGTGAATCCAGATGGCAAGTTCTATGGTGGGGGATGCTAAGATCTTGCTCTTTACCTCACCCAGGCCAGGCCACACTGTCCTTTGAGCCCATGTTAGCATGGGGCAGAGGGTGTCCCTTGCCTTCCCCTGAACTTAAGCCTTGTCCTGTTCATGGAGGTGAAACTGCTGGGCCTGGGTGGCTAGATGGACACATCTAAGCTTGCCCAGTGTGGCATCCGTTTTTTGGTGGGGAGGGGTAGATGTGGTATATTGTCACCAAAGATGGCTGCCAGTAATGCTTCCCATCCTTATTCATGTATGCCGCTTCTCCCATGAAGAGGTGGAGTCTATTTCCTCTTTCTCTGAGTCTAGGCTGGCCCATGACATGCTCTGGTAAATAAGTGCAATGATGTTGTATCAGTAGTTCTGGGATTAGCTTTTAAGAGGCCTTGCAGGTTCTGTTTTCACTCTCTTGGAAGCCAGTCATCACCTGAGAAGTCTAACCCTGTTGGGAACAGGGGTCCAGCCAGACCCTAGCCATTCCAGCTACCTCCACCCAGGTGCCGATAATCTGAGTTGAGCCATCTTGGATGTTTCAGCCTCAGCCAGCTCCCAACTGAATGCAGTCACATGGGTGACCACAGCTGACAACACATGAATCAGAACAACAAAGCTCAGCAAAGCCGACCCACAGAACTGTACCAAGTATCACCTTAATGTTTTAAGCCACTGTGCTTTGGGGAGTTTTTATGCAGCAATAGGTAACTGAAACAGGTAACAACTTTATACTGGAGATTTATGTGACTTTACCTTGCATATATTTGTATTTTCTGCTAGTAAATTGTACATACTTCATATGATGAAATTATGTCATTATAGATGGTATAGATATGGTCAGGAGCTAGTCTGAACAAGTTTGAGAGCCATTGGTTAGGTTTAGAGAGTATGGCATTTGAGTTATCTCAGTATTTCAAAATATGTGGGGTTTTTTGTTTGTTTGTTTGTTTTAGACATAGTTTCGCTTTTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCACTCACCACAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCTTCAGCCTCCCAAGTAACTGGGATTACAGGCATCTGCCACCACGCCCGGCTAATTTTTTGTGTTTTTAGGAGAGACAGGGCTTTACCATGATGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCGGCCTCGCCTCCCAAAGTGCTGGGATTATAGGCATGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCTGAGACAGGGTCCCTGTGTTGCCCAGACTGGAGTGGCATGGTGCAATCCTAGCTCACTGGAGCCGTGAACTCCTAGACTCAAATGATCTTCTTGCCTCAGCCTCCTGAGTAGCTGGGACTATAGGTGCACACCACCATGGCTGACTAATGTTTAAATATTTTGTAGAGATGGGGTCTCGCTGTGTTGCCCAGCTGGTCTCAAACTCCTGGCCTCAAGGGATCCTCCAGCCTTGGCTTCCTGAAGTGAGCTGCCACACCTGGCCAGTTTATTTTTAGTAGTAGTATATCAGATGCAGTAACTGTACGTAAAGGGTAGTTAGTGCTTGTGCCAGGCAATAAAGTAGATGGCTTATTTAATCTTTATAAATAACCTCATTTGAGAGGGCTTTATAGATGAGGTAATTTAGGTTGAGATATAAATTCAGCTGCCTGAAGTCACATAGCTAGTAAGTAATGCAGCCAGGAGTTGAACCCTGGTTTGTGTTTGTATTGCCTCCATCCCTGTTCCCATCCCCACCCCTGGTTTTAAGAACATGTACGTTAACTAGGATTTTTTAGGAGAAAGCAAGTTTATTAAGAAAGTAAAGGGGCCAGGCATAGTGGCTCACACTTTAATTCCAGCACTGTGGGAGGCCAAGGCAGGTAGATACCCTGAGGTCAAGAGTTCGAGACCAGCCAGGCCAACATGGTGAGACCTTTTCTCTAGTAAAAATACAAAAATTAGGCCAGGTACA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_813:HG4_PB_pbsv_1295:HG4_PB_HySA_1954:HG2_PB_HySA_2515:HG2_PB_PB10Xdip_1214:HG2_PB_SVrefine2Falcon1plusDovetail_880:HG3_PB_SVrefine2Falcon1Dovetail_799:HG3_PB_SVrefine2PBcRDovetail_696:HG4_PB_SVrefine2PBcRDovetail_704:HG2_PB_SVrefine2PB10Xhap12_1042:HG2_PB_SVrefine2Falcon2Bionano_391:HG2_PB_SVrefine2PBcRplusDovetail_847:HG2_10X_SVrefine210Xhap12_995;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_880;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0452165;ClusterMaxSizeDiff=0.0447056;ClusterMaxEditDist=0.107812;PBcalls=12;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=3826;DistBack=29575;DistForward=290;DistMin=290;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=295;REFWIDENED=1:235573073-235573367;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9974;PctRecOverlap=0.9812;SizeDiff=-10;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=99;MatchId=409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:./.:1:7:0:3:1/1:0:6:0:5:1/1:0:36:1/1:2:492:.:.:.
chr1	236166378	HG2_Ill_250bpfermikitraw_1739	G	GTAGTAGTTGTCACTCCTAGTGAACGAGTAGTAGTTGTCACTCCTAGTGAACGAC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_1739:HG2_PB_HySA_2521:HG3_PB_pbsv_1270:HG3_Ill_250bpfermikitraw_1733:HG2_Ill_Krunchall_1780;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1739:HG3_Ill_250bpfermikitraw_1733:HG2_Ill_Krunchall_1780;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.144144;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=11;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=1:236166377-236166380;PctSeqSimilarity=0.9823;PctSizeSimilarity=0.9815;PctRecOverlap=0.9455;SizeDiff=1;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=96;MatchId=410.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:16:0|1:22:1:0:17:./.:10:0:3:6:0/1:14:9:./.:.:.:.:.:.
chr1	236538197	HG4_PB_assemblyticsfalcon_1888	AGAGTGATTAT	TTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTCTCAATCTTTTCCCCACCTTTCCCGCCTTTTCTATTCCACAAAGCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGCTGACCCCCCCACCTCCCTCCCGGACGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGTGGCTGCCGGGCGGGAGGCTCCTCACTTCTCAGACGGGCGGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCAGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGCTCCTTGCCCTCGGGCCCCGCGGGGCCCGTCCGCTCCTCCAGCCGCTGCCTCCCGGGCGGCGCTCGCCGGCGCGGCGGCAAAGACTGAGACAGCTCCGCTGCCCGCTGAACTCCATCCTCCCGGCGGTCGGGCGGCGGCGGCTGCGGTCGGTCGCGGCAGCGGCTCCGCTTCATATCTGCAGCTGGGGCCCGCGGGCGTCAGCGCCGCGACTGTCCCGGCTCCGCACTGCCCCGGGCCGCAGCGCAGCCGCGCCAACCTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_1238:HG4_PB_pbsv_1306:HG2_PB_pbsv_1290:HG4_PB_assemblyticsfalcon_1888:HG2_PB_assemblyticsfalcon_1952:HG4_PB_HySA_1971:HG2_PB_HySA_2527:HG4_PB_SVrefine2Falcon1Dovetail_822:HG4_PB_SVrefine2PBcRDovetail_711:HG2_PB_SVrefine2Falcon1plusDovetail_887:HG2_PB_SVrefine2PBcRplusDovetail_854:HG2_PB_SVrefine2PB10Xhap12_1052:HG4_PB_HySA_1970:HG2_Ill_breakscan11_3095;NumClusterSVs=14;ExactMatchIDs=HG4_PB_assemblyticsfalcon_1888;NumExactMatchSVs=1;ClusterMaxShiftDist=0.057656;ClusterMaxSizeDiff=0.057656;ClusterMaxEditDist=0.173833;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=2055;DistBack=-11;DistForward=-1;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:236538208-236538196;PctSeqSimilarity=0.9814;PctSizeSimilarity=0.9767;PctRecOverlap=0.981;SizeDiff=-49;StartDistance=2;EndDistance=12;GTMatch=0;TruScore=97;MatchId=411.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:58:./.:23:11:5:25:./.:6:26:41:0:0/1:37:13:0/1:76:169:.:1813:.
chr1	236661267	HG2_10X_SVrefine210Xhap12_1004	T	TCTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCATAGCTCACTGCAACCTTGACCTCCTGGGTTCAAGAGATCCTCCCACCTCAGCCTCTCGAGTAGCTAGGACTACAGGCTCACACCACCATGCCTAGCTAATATTTGTAGATTTTGTAGAGATGGGGTCTTGCTATGCTGTCCAGGCTGGTCTCAAGCTCCTGGCCTCAAGTGATCCGCCCACCTCAGCCACCCAAAGTTCTGGGATTACAGGTGTGAGCCACCTCACCTGACTTCTTCTTGTCTCCTTTTTGGCCCCTCTTTCTCATTTTTCTTCTTAAAGGTTGGTGGCCCTCAACATTGCATTTTTCCTTCCCCTCCCTTCTCATATTTCATCTCTGTGGCTTAAATTACCACCTAGATGCTGTCCATAAGTGTTTGTTTTTTTTTTAGAGATGAGGTCTTGCTATATTTTTCAGGCTGGTCTCAAATTCCTGGGCTTAAGCCATCCTCCTGCTTCGGCCTCCTAAAGTGCTGGGATTACAGGTGTGAGCCACACTGCACCCAACCAAAAGCAATTTTATTTCCTACCTCTGACAGCCTCTTATGCTGCTCTTAAGAGGTCCCAGATGCTTCAACCACAGTACATCTCAAATGGCAGGACTCATTTTCTCCCCAATATCTCGCTCCCACTAAATTACTATCTCAGTGAAGAGTGCCCACTGACTCCGGTAAGAAACTGGGAATTTCATGTTCGAATTGCCCTCCTCTCCCTGACCACATCCCACTGACCACCCGTCTTGTGGATCCCCTCTCAGCCCCTTCCACCCCGACCAGTCCACGGCCCCATCTTGTCTCAGCTGCACTATGGCCATAATCGTTACTGGTCTCCAGACCTAGCTTCCCACCGCACTGTATCCCCCATCACAGGTCATCTTTCATACATCTGCTAAGAGTGATCCGAAATCAAAGTGAAATCAAGTTATGACCCCACTTAACTTCCTTGATACGTCCCAGTAAATTACACTTTGTGAATTAATTGTCATGTGTGTAATTGTTGCATTTTGGATGTACCTAATTTGATAATTTTTATTTTTATTATTTATTTTTATTTATTTTTGAGATGGAGTCTTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_705:HG2_PB_pbsv_1296:HG4_PB_SVrefine2PBcRDovetail_714:HG4_PB_pbsv_1312:HG2_PB_PB10Xdip_1245:HG3_PB_pbsv_1277:HG4_Ill_Spiral_95:HG2_Ill_Spiral_71:HG2_PB_SVrefine2PB10Xhap12_1057:HG3_PB_HySA_2004:HG4_Ill_SVrefine2DISCOVARDovetail_974:HG2_10X_SVrefine210Xhap12_1004:HG2_PB_SVrefine2Falcon2Bionano_399:HG3_Ill_SVrefine2DISCOVARDovetail_922:HG4_PB_SVrefine2Falcon1Dovetail_825:HG2_PB_SVrefine2Falcon1plusDovetail_891;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1004:HG4_Ill_SVrefine2DISCOVARDovetail_974;NumExactMatchSVs=2;ClusterMaxShiftDist=0.179646;ClusterMaxSizeDiff=0.178761;ClusterMaxEditDist=0.236283;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1107;DistBack=2761;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=258;REFWIDENED=1:236661268-236661525;PctSeqSimilarity=0.9814;PctSizeSimilarity=0.9991;PctRecOverlap=0.7886;SizeDiff=1;StartDistance=-234;EndDistance=-234;GTMatch=0;TruScore=92;MatchId=412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:19:0|1:20:0:0:21:./.:0:4:12:0:0/1:11:11:0/1:35:57:.:1137:.
chr1	237449856	HG2_PB_SVrefine2PBcRplusDovetail_862	C	CTTTATTGACTTTCTGTCTTGATGACCTGTCTGGTGCTGTCAGTGGAGCATTGAAGTCCCCCCGCTATTATTATGTTGCTGTCTGTCTCATTTGTTAGGTCTATTAGTAATTGTTTTATAAATTTGGGAGCTCCAGTGTTAGGTGCATATATGTTTAGGATTGTGATATTTTCCTGTTGCACAAGGCCTTTTACTATCATATACCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3096:HG2_PB_pbsv_1301:HG4_PB_pbsv_1317:HG3_PB_pbsv_1282:HG2_PB_assemblyticsfalcon_1972:HG4_PB_assemblyticsfalcon_1901:HG2_PB_PB10Xdip_1262:HG3_PB_SVrefine2Falcon1Dovetail_810:HG2_PB_SVrefine2Falcon1plusDovetail_896:HG4_PB_SVrefine2PBcRDovetail_717:HG4_PB_SVrefine2Falcon1Dovetail_827:HG4_Ill_manta_319:HG4_Ill_SVrefine2DISCOVARDovetail_979:HG4_Ill_MetaSV_401:HG4_Ill_GATKHCSBGrefine_902:HG2_PB_SVrefine2PBcRplusDovetail_862:HG2_PB_SVrefine2PB10Xhap12_1060:HG2_Ill_MetaSV_387:HG2_10X_SVrefine210Xhap12_1007:HG3_PB_SVrefine2PBcRDovetail_710:HG3_Ill_manta_281:HG3_Ill_SVrefine2DISCOVARDovetail_927:HG3_Ill_MetaSV_371:HG3_Ill_GATKHCSBGrefine_885:HG2_PB_SVrefine2Falcon2Bionano_403:HG2_Ill_manta_366:HG2_Ill_SVrefine2DISCOVARplusDovetail_1038:HG2_Ill_GATKHCSBGrefine_873;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1007:HG2_Ill_MetaSV_387:HG2_PB_SVrefine2PB10Xhap12_1060:HG2_PB_SVrefine2PBcRplusDovetail_862:HG4_Ill_GATKHCSBGrefine_902:HG4_Ill_MetaSV_401:HG4_Ill_SVrefine2DISCOVARDovetail_979:HG4_Ill_manta_319:HG4_PB_SVrefine2Falcon1Dovetail_827:HG4_PB_SVrefine2PBcRDovetail_717;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0861244;ClusterMaxSizeDiff=0.0813397;ClusterMaxEditDist=0.195804;PBcalls=14;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=205;DistBack=1938;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=1:237449857-237449860;PctSeqSimilarity=0.9976;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=413.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:2:33:0:22:1/1:0:14:0:8:1/1:0:30:./.:.:.:.:.:.
chr1	237569194	HG4_PB_SVrefine2Falcon1Dovetail_828	T	TGAAAAAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3097:HG2_PB_HySA_2546:HG3_PB_pbsv_1283:HG2_PB_pbsv_1302:HG4_PB_HySA_1991:HG4_PB_assemblyticsfalcon_1902:HG2_PB_assemblyticsfalcon_1973:HG3_PB_SVrefine2Falcon1Dovetail_811:HG4_PB_SVrefine2PBcRDovetail_719:HG4_PB_SVrefine2Falcon1Dovetail_828:HG4_Ill_GATKHCSBGrefine_903:HG2_PB_SVrefine2Falcon1plusDovetail_897;NumClusterSVs=12;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_903:HG4_PB_SVrefine2Falcon1Dovetail_828:HG4_PB_SVrefine2PBcRDovetail_719;NumExactMatchSVs=3;ClusterMaxShiftDist=0.147692;ClusterMaxSizeDiff=0.147692;ClusterMaxEditDist=0.212308;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=322;DistBack=2989;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=1:237569195-237569208;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=414.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:0|1:23:2:2:25:1|0:0:8:23:0:0/1:25:8:0/1:6:33:.:.:.
chr1	237636742	HG4_Ill_scalpel_1220	T	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_1623:HG3_Ill_manta_282:HG3_Ill_Spiral_1412:HG2_Ill_manta_367:HG4_PB_assemblyticsfalcon_1903:HG4_Ill_scalpel_1220:HG3_Ill_Krunchall_1827:HG3_Ill_GATKHC_2168:HG3_Ill_GATKHCSBGrefine_886:HG3_Ill_250bpfermikitraw_1751:HG3_Ill_150bpfermikitraw_1672:HG2_Ill_Krunchall_1801:HG2_Ill_GATKHC_2127:HG2_Ill_GATKHCSBGrefine_874:HG2_Ill_250bpfermikitraw_1758;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1623:HG4_Ill_scalpel_1220:HG3_Ill_Krunchall_1827:HG3_Ill_GATKHC_2168:HG3_Ill_GATKHCSBGrefine_886:HG3_Ill_250bpfermikitraw_1751:HG3_Ill_150bpfermikitraw_1672:HG2_Ill_Krunchall_1801:HG2_Ill_GATKHC_2127:HG2_Ill_GATKHCSBGrefine_874:HG2_Ill_250bpfermikitraw_1758;NumExactMatchSVs=11;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0980392;PBcalls=1;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=-1;DistForward=833;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=59;REFWIDENED=1:237636720-237636778;PctSeqSimilarity=0.9623;PctSizeSimilarity=0.9259;PctRecOverlap=0.9273;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=93;MatchId=415.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:38:0|1:39:4:1:31:1|0:0:16:24:0:0/1:27:25:./.:.:.:.:.:.
chr1	237679030	HG2_PB_SVrefine2Falcon2Bionano_404	T	TTTCTCCTCCTCGTCCTTCTCCGTCTCCTCCTTCTCCCTCTTCTCCTCCTCCCTCTTCTCCTTCTTCTCCTCCTCCCTCTTCTCCTCATCCCTTTTCTCCTCCTCCCTCTTCTCTTTCTCCCTCTTCTTCTCCCTATTCTCCTTCTCTCTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_829:HG3_PB_HySA_2019:HG2_PB_pbsv_1304:HG2_PB_HySA_2549:HG2_Ill_manta_368:HG2_Ill_MetaSV_388:HG4_Ill_MetaSV_402:HG4_Ill_GATKHCSBGrefine_905:HG3_PB_SVrefine2PBcRDovetail_711:HG3_Ill_manta_283:HG3_Ill_SVrefine2DISCOVARDovetail_930:HG3_Ill_GATKHCSBGrefine_887:HG2_PB_SVrefine2PBcRplusDovetail_863:HG2_PB_SVrefine2PB10Xhap12_1062:HG2_PB_SVrefine2Falcon2Bionano_404:HG2_Ill_GATKHCSBGrefine_875:HG4_PB_HySA_1994:HG2_PB_PB10Xdip_1320:HG4_PB_pbsv_1321:HG3_PB_pbsv_1285:HG2_PB_SVrefine2Falcon1plusDovetail_898:HG3_PB_SVrefine2Falcon1Dovetail_812:HG2_10X_SVrefine210Xhap12_1008:HG4_Ill_SVrefine2DISCOVARDovetail_981:HG2_Ill_SVrefine2DISCOVARplusDovetail_1040:HG4_PB_SVrefine2PBcRDovetail_720;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_875:HG2_PB_SVrefine2Falcon2Bionano_404:HG2_PB_SVrefine2PB10Xhap12_1062:HG2_PB_SVrefine2PBcRplusDovetail_863:HG3_Ill_GATKHCSBGrefine_887:HG3_Ill_SVrefine2DISCOVARDovetail_930:HG3_Ill_manta_283:HG3_PB_SVrefine2PBcRDovetail_711:HG4_Ill_GATKHCSBGrefine_905:HG4_Ill_MetaSV_402;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0863787;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.250804;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=150;DistBack=-327;DistForward=4;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=414;REFWIDENED=1:237678951-237679364;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:45:1/1:0:19:5:27:1/1:3:63:0:42:1/1:0:12:./.:.:.:.:.:.
chr1	238214942	HG2_10X_SVrefine210Xhap12_1012	T	TGTGTGTATGTGGTGTGTGATGTATGTATTTGTGGTGTGATGTGTGCAGTGTATGCGTGTGTTGTATATTTGTGTGGTGAATGTGTGGTATATGTACTGTGTGTGTGTTTTGTGTGTGGATGGTATGTGTGGTGTGTGGAGTGTATGTGAGGTATGTGCATGTAGGTATGTGGTATATGTGTCTGTGGTGTGTGTGGTGTATTTGTGTGGTGTATGTATTTGTGTTATATGTGTTCGTGTGTGTATAGTGTGGTGTGTGTGTGGTGTACATGTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_813:HG4_PB_HySA_1999:HG2_PB_pbsv_1307:HG4_PB_pbsv_1326:HG3_Ill_manta_284:HG3_PB_pbsv_1287:HG3_Ill_MetaSV_372:HG3_Ill_GATKHCSBGrefine_889:HG2_Ill_manta_369:HG2_Ill_MetaSV_389:HG4_Ill_manta_320:HG4_Ill_MetaSV_404:HG4_Ill_GATKHCSBGrefine_909:HG2_Ill_GATKHCSBGrefine_878:HG2_PB_PB10Xdip_1321:HG2_Ill_breakscan11_3098:HG4_PB_SVrefine2PBcRDovetail_721:HG3_PB_SVrefine2PBcRDovetail_713:HG3_Ill_SVrefine2DISCOVARDovetail_934:HG2_PB_SVrefine2Falcon2Bionano_407:HG2_Ill_SVrefine2DISCOVARplusDovetail_1044:HG2_10X_SVrefine210Xhap12_1012:HG4_PB_SVrefine2Falcon1Dovetail_830:HG4_Ill_SVrefine2DISCOVARDovetail_985:HG2_PB_SVrefine2PBcRplusDovetail_865:HG2_PB_SVrefine2PB10Xhap12_1064:HG2_PB_SVrefine2Falcon1plusDovetail_900:HG2_10X_SVrefine210Xhap12_1011;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1012:HG2_Ill_SVrefine2DISCOVARplusDovetail_1044:HG2_PB_SVrefine2Falcon2Bionano_407:HG3_Ill_SVrefine2DISCOVARDovetail_934:HG3_PB_SVrefine2PBcRDovetail_713:HG4_PB_SVrefine2PBcRDovetail_721;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0912281;ClusterMaxSizeDiff=0.0842105;ClusterMaxEditDist=0.256499;PBcalls=13;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=273;DistBack=-154;DistForward=1;DistMin=-154;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=154;REFWIDENED=1:238214943-238215096;PctSeqSimilarity=0.9901;PctSizeSimilarity=1;PctRecOverlap=0.8901;SizeDiff=0;StartDistance=-30;EndDistance=-30;GTMatch=0;TruScore=96;MatchId=417.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:71:1/1:0:42:0:22:./.:10:184:5:91:1/1:0:26:./.:.:.:.:.:.
chr1	239126257	HG3_PB_pbsv_1290	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGGAGTCTCGCTCTGTCGCCCAGGCCTGGAGTGGCAGTGGCGGCGATCTCGCCTCACTTGCAAGCTCGCGCCCCAGGTTCACGCCATCCCTGCCTCAGCCTCCCGAAGCTGCTGGGACTCACAGGCGCCCGCTACCACGCCCGGCCTAATTTTTTGTTTTTTAGTAGAGAACGGGGTTTCACCCGTGTTACGCAGATGGTCTCGATCTCCTGACTCTCCGTGATCCGCCCGCCTCGGCCTCCCAAGTGCTGGATTAACAGGCGTGAGCCACGCGGCGCCGCCTAGATCCTTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_818:HG3_PB_pbsv_1290:HG3_PB_HySA_2038:HG2_PB_pbsv_1310:HG2_PB_assemblyticsPBcR_1977:HG2_PB_assemblyticsfalcon_1996:HG4_PB_assemblyticsfalcon_1916:HG2_PB_PB10Xdip_1332:HG2_PB_SVrefine2Falcon2Bionano_410:HG2_PB_SVrefine2PB10Xhap12_1069:HG2_Ill_GATKHCSBGrefine_880:HG2_PB_SVrefine2PBcRplusDovetail_868:HG2_PB_SVrefine2Falcon1plusDovetail_904:HG2_PB_HySA_2561:HG4_PB_SVrefine2Falcon1Dovetail_832;NumClusterSVs=15;ExactMatchIDs=HG3_PB_pbsv_1290;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147465;ClusterMaxSizeDiff=0.147465;ClusterMaxEditDist=0.205837;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=337;DistBack=2915;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=1:239126258-239126260;PctSeqSimilarity=0.9484;PctSizeSimilarity=0.9941;PctRecOverlap=0.9614;SizeDiff=2;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=96;MatchId=419.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:32:0|1:17:2:6:28:./.:26:0:3:2:0/1:28:8:0/1:12:9:.:.:.
chr1	240675804	HG4_Ill_manta_324	C	CAGTTTCTTAAAGTGAGCTTCCCTGACCAGTAATATAAACATCATCCGAGAACTTGTTAGAAACGCACATTTTGTGCCACCCCCCAGACCTACTAAATGAGAAACCTGTGAAAGAGATGAGGTGCTTTGGAGCCCAGCAATCTGTATTTTAACAAGCTCTCCAGATAATTCTGGTTTT	20	PASS	ClusterIDs=HG2_PB_pbsv_1323:HG2_PB_HySA_2594:HG4_PB_pbsv_1343:HG2_PB_assemblyticsPBcR_2000:HG2_PB_SVrefine2PBcRplusDovetail_877:HG4_PB_SVrefine2PBcRDovetail_731:HG4_PB_assemblyticsfalcon_1933:HG3_PB_assemblyticsfalcon_1988:HG4_Ill_svaba_1665:HG4_Ill_manta_324:HG4_Ill_MetaSV_410:HG4_Ill_GATKHCSBGrefine_921:HG3_Ill_svaba_1680:HG3_Ill_Spiral_1441:HG3_Ill_SVrefine2DISCOVARDovetail_945:HG3_Ill_MetaSV_376:HG3_Ill_GATKHCSBGrefine_895:HG2_Ill_svaba_1644:HG2_Ill_manta_373:HG2_Ill_SpiralSDKrefine_1306:HG2_Ill_MetaSV_393:HG2_Ill_GATKHCSBGrefine_888:HG2_10X_SVrefine210Xhap12_1023:HG2_PB_SVrefine2PBcRplusDovetail_878:HG2_PB_SVrefine2PB10Xhap12_1079:HG4_PB_SVrefine2Falcon1Dovetail_840:HG3_PB_SVrefine2Falcon1Dovetail_826:HG2_Ill_SVrefine2DISCOVARplusDovetail_1059:HG2_PB_PB10Xdip_1359:HG2_Ill_breakscan11_3100:HG3_PB_pbsv_1301;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1023:HG2_Ill_GATKHCSBGrefine_888:HG2_Ill_MetaSV_393:HG2_Ill_SpiralSDKrefine_1306:HG2_Ill_manta_373:HG2_Ill_svaba_1644:HG3_Ill_GATKHCSBGrefine_895:HG3_Ill_MetaSV_376:HG3_Ill_SVrefine2DISCOVARDovetail_945:HG3_Ill_Spiral_1441:HG3_Ill_svaba_1680:HG4_Ill_GATKHCSBGrefine_921:HG4_Ill_MetaSV_410:HG4_Ill_manta_324:HG4_Ill_svaba_1665;NumExactMatchSVs=15;ClusterMaxShiftDist=0.144092;ClusterMaxSizeDiff=0.144092;ClusterMaxEditDist=0.24024;PBcalls=14;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=177;DistBack=44254;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:240675805-240675804;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=420.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:30:./.:16:7:3:22:0|1:27:0:0:25:0/1:33:19:./.:.:.:.:.:.
chr1	240699867	HG3_PB_SVrefine2Falcon1Dovetail_827	G	GGAGTTTAAGACAAAATGGCAGCGGGGGCTGTAGATCTGGAAGCCATCTGTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1080:HG2_PB_HySA_2595:HG2_PB_PB10Xdip_1360:HG3_PB_pbsv_1302:HG3_PB_SVrefine2Falcon1Dovetail_827:HG2_PB_pbsv_1324:HG2_PB_SVrefine2PBcRplusDovetail_879;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1080:HG3_PB_SVrefine2Falcon1Dovetail_827:HG2_PB_SVrefine2PBcRplusDovetail_879;NumExactMatchSVs=3;ClusterMaxShiftDist=0.130841;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.336449;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=51;DistBack=24060;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=205;REFWIDENED=1:240699868-240700072;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:44:0|1:28:1:3:40:./.:5:0:6:0:./.:26:2:./.:.:.:.:.:.
chr1	240941099	HG2_PB_SVrefine2PBcRplusDovetail_881	T	TTCACCTTCATGATCTAATGACCTTCCAAAGGCCCTAACTCCTAATACCATCACCTTCATGATCTAATGACCTTCCAAAGGCCCTGACTCCTAATACCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_913:HG3_PB_assemblyticsfalcon_1994:HG3_PB_SVrefine2Falcon1Dovetail_829:HG2_PB_HySA_2597:HG4_PB_HySA_2037:HG2_PB_HySA_2596:HG4_PB_pbsv_1347:HG4_PB_assemblyticsfalcon_1937:HG2_PB_PB10Xdip_1362:HG3_PB_HySA_2058:HG4_PB_SVrefine2Falcon1Dovetail_842:HG2_PB_pbsv_1327:HG3_PB_SVrefine2PBcRDovetail_718:HG3_PB_pbsv_1304:HG2_PB_SVrefine2PBcRplusDovetail_881:HG2_PB_SVrefine2PB10Xhap12_1082:HG2_PB_SVrefine2Falcon2Bionano_418;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_913:HG3_PB_SVrefine2PBcRDovetail_718:HG2_PB_SVrefine2PBcRplusDovetail_881:HG2_PB_SVrefine2PB10Xhap12_1082:HG2_PB_SVrefine2Falcon2Bionano_418;NumExactMatchSVs=5;ClusterMaxShiftDist=0.128079;ClusterMaxSizeDiff=0.128079;ClusterMaxEditDist=0.23301;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=98;DistBack=6949;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=446;REFWIDENED=1:240941100-240941545;PctSeqSimilarity=0.9946;PctSizeSimilarity=1;PctRecOverlap=0.1313;SizeDiff=0;StartDistance=-86;EndDistance=-86;GTMatch=0;TruScore=70;MatchId=422.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:45:1/1:4:25:0:7:./.:2:0:3:0:0/0:18:0:./.:.:.:.:.:.
chr1	241620083	HG2_PB_SVrefine2Falcon1plusDovetail_917	A	AAAACTTTCGGCCGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTAGTGGCGGGTGCCTGTAGTCCCAGCTACTTGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_722:HG3_PB_HySA_2068:HG2_PB_assemblyticsfalcon_2024:HG2_PB_pbsv_1332:HG2_PB_SVrefine2Falcon1plusDovetail_917:HG3_PB_pbsv_1309:HG2_Ill_breakscan11_3101:HG2_PB_SVrefine2Falcon2Bionano_422;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_917;NumExactMatchSVs=1;ClusterMaxShiftDist=0.171053;ClusterMaxSizeDiff=0.171053;ClusterMaxEditDist=0.269737;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=324;DistBack=33362;DistForward=41910;DistMin=33362;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=1:241620077-241620091;PctSeqSimilarity=0.9925;PctSizeSimilarity=1;PctRecOverlap=0.9785;SizeDiff=0;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=99;MatchId=424.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:./.:13:8:11:21:0|1:20:0:0:8:0/1:25:9:0/1:9:26:.:.:.
chr1	242684919	HG2_10X_SVrefine210Xhap12_1039	A	ATAATTATTAATTTATTTTTTCAACATCATAAAAAAGTGGCCATCCATTTGATT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_741:HG2_PB_HySA_2616:HG3_PB_pbsv_1319:HG3_PB_assemblyticsfalcon_2015:HG4_PB_HySA_2057:HG3_PB_HySA_2088:HG4_PB_SVrefine2Falcon1Dovetail_851:HG4_Ill_svaba_1684:HG4_Ill_manta_332:HG4_Ill_SVrefine2DISCOVARDovetail_1000:HG4_Ill_Krunchall_1949:HG4_Ill_GATKHC_2189:HG4_Ill_GATKHCSBGrefine_930:HG4_Ill_250bpfermikitraw_1801:HG4_Ill_150bpfermikitraw_1758:HG3_Ill_svaba_1702:HG3_Ill_SVrefine2DISCOVARDovetail_956:HG3_Ill_Krunchall_1891:HG3_Ill_GATKHC_2241:HG3_Ill_GATKHCSBGrefine_905:HG3_Ill_250bpfermikitraw_1807:HG3_Ill_150bpfermikitraw_1731:HG2_Ill_svaba_1666:HG2_Ill_SVrefine2DISCOVARplusDovetail_1072:HG2_Ill_Krunchall_1864:HG2_Ill_GATKHC_2195:HG2_Ill_GATKHCSBGrefine_897:HG2_Ill_250bpfermikitraw_1816:HG2_Ill_150bpfermikitraw_1677:HG2_10X_SVrefine210Xhap12_1039:HG2_Ill_breakscan11_3102;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1039:HG2_Ill_150bpfermikitraw_1677:HG2_Ill_250bpfermikitraw_1816:HG2_Ill_GATKHCSBGrefine_897:HG2_Ill_GATKHC_2195:HG2_Ill_Krunchall_1864:HG2_Ill_SVrefine2DISCOVARplusDovetail_1072:HG2_Ill_svaba_1666:HG3_Ill_150bpfermikitraw_1731:HG3_Ill_250bpfermikitraw_1807:HG3_Ill_GATKHCSBGrefine_905:HG3_Ill_GATKHC_2241:HG3_Ill_Krunchall_1891:HG3_Ill_SVrefine2DISCOVARDovetail_956:HG3_Ill_svaba_1702:HG4_Ill_150bpfermikitraw_1758:HG4_Ill_250bpfermikitraw_1801:HG4_Ill_GATKHCSBGrefine_930:HG4_Ill_GATKHC_2189:HG4_Ill_Krunchall_1949:HG4_Ill_SVrefine2DISCOVARDovetail_1000:HG4_Ill_manta_332:HG4_Ill_svaba_1684:HG4_PB_SVrefine2Falcon1Dovetail_851;NumExactMatchSVs=24;ClusterMaxShiftDist=0.126126;ClusterMaxSizeDiff=0.126126;ClusterMaxEditDist=0.2;PBcalls=7;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=53;DistBack=51233;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=1:242684920-242684972;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=426.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:10:0|1:30:4:0:8:0|1:18:0:1:26:0/1:27:32:./.:.:.:.:.:.
chr1	243490561	HG2_PB_assemblyticsfalcon_2046	A	ATAAAATTATAATTTATAATTTTATAGAAATTAAAATTATAATTTATAATTTTATAGAAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_1346:HG2_PB_PB10Xdip_1377:HG4_Ill_GATKHC_2195:HG4_Ill_250bpfermikitraw_1809:HG4_Ill_150bpfermikitraw_1764:HG3_PB_assemblyticsfalcon_2022:HG3_Ill_GATKHC_2248:HG3_Ill_250bpfermikitraw_1814:HG2_PB_assemblyticsfalcon_2046:HG2_PB_assemblyticsPBcR_2033:HG2_Ill_GATKHC_2203:HG2_Ill_250bpfermikitraw_1825:HG2_Ill_150bpfermikitraw_1684;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1684:HG2_Ill_250bpfermikitraw_1825:HG2_Ill_GATKHC_2203:HG2_PB_assemblyticsPBcR_2033:HG2_PB_assemblyticsfalcon_2046:HG3_Ill_250bpfermikitraw_1814:HG3_Ill_GATKHC_2248:HG3_PB_assemblyticsfalcon_2022:HG4_Ill_150bpfermikitraw_1764:HG4_Ill_250bpfermikitraw_1809:HG4_Ill_GATKHC_2195;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0650406;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.130081;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=60;DistBack=32752;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=5674;REFWIDENED=1:243490562-243496184;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=427.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:73:./.:0:6:1:1:./.:1:0:2:0:./.:5:59:./.:.:.:.:.:.
chr1	243643587	HG2_PB_SVrefine2Falcon2Bionano_429	T	TGGATGGGTGGATGGATGAGTGGGATGGATGGATGGGTGGGATGGATGGATGGATAGGTGGGATGGATGGGTGGGTGGGATGGATGGATGGGTGGATGGATGGATGGATAGGTGGGATGGATGGGTGGGTGGGATGGGTGGATGGGTGGATGGGTGGGATGGATGAATGGGGGATGGATGGATGGATGGATGGATGGATGGATGGGTGGGATGGATGGATGGATAGGTGGGATGGGTGGGATGGATGGATGGGTGGATGGATGGATGGATAGGTGGGATGGATGGGTGGGTGGGATGGATGGGTGGATGGGTGGGATGGATGGATGGATGGGTGGATGGATGGATGGGTGGGTGGGATGGATGGGTGGATGGGTGGGATGGATGGATGGATGGGTGGGATGGATGGGGGATGGATGGATGGGTGGGATGGATGGATGGATGGGTGGGATGGATGAATGGGGGATGGATGGATGGATGGGTGGGATGGATGGATGGGTGGGATGGATGGATGGATGGGTGGGATGGATGGATGGATGGGATGGATGGGTGGGATGGATGGATGGGTGGGTGGGATGGATGGGTGGATGGATGGATGGGTGGGATGGATGGATGGGTGGGATGGATGGATGGATGGTTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_737:HG3_PB_pbsv_1328:HG4_PB_pbsv_1368:HG2_PB_PB10Xdip_1378:HG2_PB_pbsv_1349:HG2_PB_SVrefine2Falcon1plusDovetail_924:HG2_PB_SVrefine2PBcRplusDovetail_893:HG2_PB_SVrefine2PB10Xhap12_1099:HG2_PB_SVrefine2Falcon2Bionano_429:HG3_PB_SVrefine2Falcon1Dovetail_843:HG4_PB_SVrefine2Falcon1Dovetail_859:HG4_PB_SVrefine2PBcRDovetail_742;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_429:HG2_PB_SVrefine2PB10Xhap12_1099;NumExactMatchSVs=2;ClusterMaxShiftDist=0.116261;ClusterMaxSizeDiff=0.11469;ClusterMaxEditDist=0.239683;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=636;DistBack=91349;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=632;REFWIDENED=1:243643581-243644212;PctSeqSimilarity=0.9767;PctSizeSimilarity=0.9725;PctRecOverlap=0.4992;SizeDiff=-18;StartDistance=-319;EndDistance=-319;GTMatch=0;TruScore=81;MatchId=428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:37:1/1:0:5:0:7:1/1:6:394:6:415:./.:0:0:./.:2:28:.:.:.
chr1	244008646	HG2_PB_SVrefine2Falcon2Bionano_432	T	TTGTAATCCCAGCACTTTGGGAGGCCAGGGCAGGAGGATCACTTATGTCCAGGAGTTCAAGGCCAGCCTGGGCAACAAAGTGAGACTATGTCCGTACAAAAAGGAAAAAAAAAAAGAAAAATTTACAATTAGCTGGGCATCATGGCATGCACCTGCAGTCCCAGCTGCTTGGGAGGCTGAGGTGGGAGAAATCACTTGAGCCCAGAAGTTTAAAGCTGCGGTGAGCTATGACTGCACCACCACACTCTGGCCTGGGCAACAGAGCAAGACCCTGTCTCTTTTTTAAAAAAAAGGGGGTATTAGAATCTGGATGTATTTTCCCAAAATACATTTGTTTGACAGAATGCTAAATTAGAGAAATTCTAGAAAAAAAATGAAAATAAAAAGAGAAATTCTGTGGGCTAGTTAGTGAGATATTCCACAAATCATACTCTTGAAACGTCACTATTGGCATATTAAAGGTTCTAAAATAAATAAATATGTATAACTTTATCTCAGCAAAGCCTAAATTTATTACTGTCATAGGAAATGGCCACATAATAAGACTCATTTCACCACACATGTTAAAAAAAAAAAAGCCAAAAAACCTTCAATAAAGAATCTAAACATTAAAAAACATTTTAATTTGATGTAACATCCTAAAGAATCCAACATGGCCAACTGCCTACATAATATAGGGCTAGATAACTGAAAGGGTTAACTACTTACACTGCATAAAGAATTATAAGTTAAATACCGGCAGACACTGGTGCATGATATCTCTAGAAGAGCTGCACTGTTGCCCTTCTCTTTGGTAATACTTTGTTGATGTTGAGCAAGGGGCTGAACATCTACTAAGACCATTCTTGGTTTTGTACTAAAAAACTATATAATATGAGTAAAAGACAATTCAGGTCTTACTATTCTTGGAGTAGAAATGGAAGAGAGATCAGGGTAATAATTAGTAATAACAAAAAATAATATATAGCCAATAAACATCTATAAAATACATACTTTTGTATTAAAATGGTTTGTATTACAGTATCTTTTTAAAGAACACTAAAAAAAATTTTCAAAATTGATTCTGTATTTTGAAGTGAACATTTTATTATCAGAATACTAAAGCTGGAGGGACCCTCATTTTATAGCTGAAGAAACAGAGACCAAGACAGAAGAAGTAACTTGCCCAAGATCAAAGAGTCACCAAATGGCCAACCAGGACCAGACAACCAGGCATATGCTCTTTACACTCACATTACTTCTTCAGTTTAAAACAATACACTGAAATATCCAGACCAACCCAAAAATCAATGAATTTTGTTTTATAACAAAACTGTTTCTAAAAACTAGTGCTTTAGATAAATGTTTTTTATCAGTGCTCATATGTGTAAGATTAAACTGTTAAGATGTATGTTAAATCAACAGGACAGAATTTACAATCTTCATCAGAGGCAGTGAACCCAAGCATACATTATAGAGATGGCTTTACCCATTTTCACTTAAAACTATTATCAAATATTACCCATAATTTTCAGCTTTAAAAATTGCTCCTGGGTCTTTACGGGCTAAAATGATACATTCTTTGAAAATAACTTAAAAGATGTCATAGGTACACTACTCTGGAATTATGATCAATAAGTTAGAAATAAACAATTATATTGACTAGTAAGCAGCAAACCATGTTCTTTAATTTTCCTACAGCAGCAATGCTCCTGCACCACAGCATGTACACTGTCCCATTCAGTCTTCCATATTAACTAAAAACACTAATCCACAAGATGAGCTGGAACTTTGTCATCTGTTTCCCAGGGTAGACAAAAGTTCACCTCCTTCTATACTCCTAACTTTTCTACAGATGTGTTCCATCCAACGAACTATAACAAAATTTGGTTTCTCTTTTTAGCTTATTGTATTGAACATTTCATTGCTAATTTAATTCTTCCCATTCTTATAAAGTTTCACACAAAATTCTTGACAGATTCCATTTAGATTTTACACAAAACAATTACACTAAAGGTATCTTCATTCTGAACTGACTGCTTGAGAATTTGATGATAATAGTAATGGCATTTGAAAGTCATTTTATAATTTACAAAACATTTTGCATATTTTACTTCATTCAATCACATAATTTAGTAAAGCAATTTGACAGTGCCTAGCACTTACGCGATGCTGGCAAATATGGAACAAATGAATGAGTGGATGAATGATGAAGATGCAGCCTTAGATAACTAACAAAGAACAGGCTAAGCAAACAAACATAAATCAGCAGAGAGAATGGTCTTAAGCCATCTTAAAAATAAAACTGAATTTAAACATTAAAAAAGCACTTATAGAGAAATTATAATTAAAATTATAATAAATACTCTGCCCTATTCCTTAAGGTATGTTTCCTATAGACCTCCATTAATTACAATGACTAGAACACAATAAATGTTATCTTTTTCACCATTTTTGTTGAGATCAAGTTTCAACTTCAAACAAAACCACCATCAGTACTATAAATATATATCGATATATTGATGATAATATATTGATAATATATATATTTATAGTACTGATGGTGGTTTTGTTTGAAGTTGAAACTTGATCTCAACAAAAATGGTGAAAAAGATACATTTATAATATATCGATATATATTATAGCATTAATCTAACCAAAATTATCAATTATGGGAAGAAAAATGGGAAAGAATGGCATATTTTCTTAATGATACTTTTAAGAATTTGTAAAAGATACGTGTTTGCTTATAGTAACCAGCCATTCAATTTTAAGCAAAAAGTAAACTTCTTCAAACATCTTTTGAAAATTTCTACTCAAAAAATATGTAACATACCTATACTTATTCAGTCAATAAATATGTATTGTCTACTCTGTGACAACGATTATTACAGGGAGGTAAGTAAAACTAAGTGGTTTCTTTAAAAATCTTTCCCAAACTTGTAACTTATCAAAGAGCTTTCACATATATCAATTCATTTGACTCTAAAAAATAAATCTGTGCTGTAGTTATTACAGCCACAATTTTGAACCTGTGACCAATCAATAATAACATCACTTCCCCTAGTTACAATAAGTTACCAACAGGTTAAAAAAAAAAAAAAAGTGACTACCTTCAAGTCTTCTATCAATTTGGTATGCTTTCTACCAAGTAATACAATATGAACTCTCAAAAACATATAATTAACATTTGCAAATAGTTCTGAACATTTTTTCTGTATCAGATTTTTCAAAAGTCCAAAAAGTAAAATGTTTTTAAATAAATTAAAAATATAACTAAGGCATCACAAATGAAATAACAGAAGACTAAAAGTAGGTTAACATAAAGCTAAAAGTCTCCCAACAACTCTCTTTCTTGTGAACAAGGACAAAATTTATAGGTTAATAGTTTCCTGTAAGTTAATTTCTAAGTTAAAAGCCAGAATACAATTCAATAATACAACTTTCTCTAAACTCTTTGTAATTAATACTATGTAGAATGTATTTGCTCCCCACAATTTTTTAATATTCTTTATATATGATAGCCAAAGTGAATTAGTAAAGGACATCTGAAGTTCAAACACAACAGACTGTTGCAACTTTGAAAAACAAATGATGGTCAAGGGTAACCACAATATAGTTCTGTGGCATTTTCTGATTTCAAGAAGTAAGTGAAACTAATATGTACCATAATAAATACATAGGGCTATATCAAACTTTCAGAAGGATATGAGAGACAAGAAACATTCTGAAATGGAAAGGAAATTCAAGGCAATTTGCTCTGTACTTCAAATAATTCCAAGGCAGTCTGTCCCTATTTTCAGAGTTGTTATCCTGCTAAAAAACACATCATATAGAGAAAGTGAGCCACATAAACTATATACTTTGGGTATCTTTCCTCTCTTAAGAGCACTTTGTGGGATTTTCTTAAAGCTCTTTCTATAGATAACTTCACTGAGGTTCAGAATATGGCAAAATACCTGAATAGGCAAAATTCCTAACTTTCAAACAACGTATCAGTTCTTCCAAACTGCCAATTCTGAAAAATCAATTTTATTAACTTTAAAACATTTCTACAAAAACATGAAGCATTTTCCTGGCCGTTTCCCTACTCCTGTTTAGGGCATCTGAGTGCCATTTCAATCAACATGTCCATTATTAAAAATAAAAAAGCAACTTGCACTGTGTGATATACTTAATATTTTAATTTGAAACTAATAGAAAAATGCTTATTAGATTCCTGTTTCACCTAAATCACTGAACAAGCTATTGATAAATTATTCCCTCCATTTCTCATGTAAAGCGTAGGCTGCCTCTATGTGAAGGCACGTATAATACCATGGACAGGTTGGGGACTGCTACTAAAAGAATTTCAGGTGGCCAGGCACAGTGGCACACGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_862:HG4_PB_pbsv_1371:HG3_PB_pbsv_1331:HG2_PB_pbsv_1352:HG2_PB_PB10Xdip_1381:HG2_PB_SVrefine2PB10Xhap12_1102:HG2_Ill_breakscan11_3104:HG3_PB_assemblyticsfalcon_2028:HG2_PB_assemblyticsfalcon_2053:HG2_PB_assemblyticsPBcR_2039:HG3_PB_SVrefine2Falcon1Dovetail_846:HG2_PB_SVrefine2Falcon1plusDovetail_927:HG3_PB_SVrefine2PBcRDovetail_740:HG4_PB_SVrefine2PBcRDovetail_745:HG4_Ill_SVrefine2DISCOVARDovetail_1008:HG3_Ill_SVrefine2DISCOVARDovetail_967:HG2_PB_SVrefine2PBcRplusDovetail_896:HG2_PB_SVrefine2Falcon2Bionano_432:HG2_Ill_SVrefine2DISCOVARplusDovetail_1080:HG2_10X_SVrefine210Xhap12_1048;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1048:HG2_Ill_SVrefine2DISCOVARplusDovetail_1080:HG2_PB_SVrefine2Falcon2Bionano_432:HG2_PB_SVrefine2PBcRplusDovetail_896:HG3_Ill_SVrefine2DISCOVARDovetail_967:HG4_Ill_SVrefine2DISCOVARDovetail_1008:HG4_PB_SVrefine2PBcRDovetail_745;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0758746;ClusterMaxSizeDiff=0.0758746;ClusterMaxEditDist=0.200575;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=4358;DistBack=13209;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=76;REFWIDENED=1:244008647-244008722;PctSeqSimilarity=0.9983;PctSizeSimilarity=1;PctRecOverlap=0.986;SizeDiff=0;StartDistance=-61;EndDistance=-61;GTMatch=0;TruScore=99;MatchId=429.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:75:1/1:0:30:0:24:./.:0:4:0:7:1/1:0:30:1/1:1:329:.:4281:.
chr1	244142828	HG2_PB_SVrefine2PB10Xhap12_1103	T	TGGCCAGGAGTGTGGGGGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGTGGGGGGTGGGACGGAAGGTACCCAGGAGGGTGGCGGGAGGGGCCATCGGCCAGGAGTGTGGGGTGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGTGTGGGGGGGTGGGACGGAAGGTACCAGGAGGGTGGCGGGACGGAAGGTACCAGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGGGGGGGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGGGGGGGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGGGGGGGGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGCCATCGGCCAGGAGTGGGGGGGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGGGGGGGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGGGGGGGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGGGGGGGGGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGGGGGGGTGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATCGGCCAGGAGTGGGGGGGTGGGACGGAAGGTACCACGAGGGTGGCGGGTGGGGCATCGGCCAGGAGTGGGGGGGGGTGGGACGGAAGGTACCCACGAGGGTGGCGGGTGGGGCCATC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_741:HG4_PB_pbsv_1372:HG2_PB_pbsv_1353:HG3_PB_SVrefine2Falcon1Dovetail_847:HG2_PB_HySA_2635:HG3_PB_HySA_2100:HG2_PB_HySA_2634:HG4_PB_SVrefine2Falcon1Dovetail_863:HG3_PB_pbsv_1333:HG2_PB_SVrefine2Falcon1plusDovetail_928:HG2_PB_SVrefine2Falcon2Bionano_433:HG2_PB_SVrefine2PB10Xhap12_1103:HG4_PB_HySA_2065:HG4_PB_SVrefine2PBcRDovetail_746:HG2_PB_SVrefine2PBcRplusDovetail_897;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1103;NumExactMatchSVs=1;ClusterMaxShiftDist=0.28802;ClusterMaxSizeDiff=0.286778;ClusterMaxEditDist=0.336165;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=856;DistBack=7330;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=191;REFWIDENED=1:244142829-244143019;PctSeqSimilarity=0.9415;PctSizeSimilarity=0.8807;PctRecOverlap=0.8273;SizeDiff=-116;StartDistance=-110;EndDistance=-110;GTMatch=1;TruScore=88;MatchId=430.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:38:1/1:0:14:1:18:./.:0:2:0:3:./.:2:0:0/1:11:25:.:.:.
chr1	244162023	HG2_Ill_svaba_1672	C	CACACACATAGACACACACAGACATACACACATCCACACAAAGACTCACAT	20	PASS	ClusterIDs=HG3_PB_HySA_2101:HG2_PB_assemblyticsfalcon_2055:HG3_PB_pbsv_1334:HG2_PB_HySA_2637:HG4_Ill_svaba_1690:HG4_Ill_scalpel_1272:HG4_Ill_Krunchall_1961:HG4_Ill_GATKHC_2200:HG4_Ill_GATKHCSBGrefine_938:HG4_Ill_250bpfermikitraw_1812:HG3_Ill_svaba_1709:HG3_Ill_scalpel_1409:HG3_Ill_Spiral_1466:HG3_Ill_Krunchall_1902:HG3_Ill_GATKHC_2256:HG3_Ill_GATKHCSBGrefine_913:HG3_Ill_FB_1261:HG3_Ill_250bpfermikitraw_1818:HG3_Ill_150bpfermikitraw_1740:HG2_Ill_svaba_1672:HG2_Ill_scalpel_1319:HG2_Ill_SpiralSDKrefine_1327:HG2_Ill_Krunchall_1877:HG2_Ill_GATKHC_2208:HG2_Ill_GATKHCSBGrefine_908:HG2_Ill_250bpfermikitraw_1828:HG2_Ill_150bpfermikitraw_1688:HG4_PB_HySA_2066;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1688:HG2_Ill_250bpfermikitraw_1828:HG2_Ill_GATKHCSBGrefine_908:HG2_Ill_GATKHC_2208:HG2_Ill_Krunchall_1877:HG2_Ill_SpiralSDKrefine_1327:HG2_Ill_scalpel_1319:HG2_Ill_svaba_1672:HG3_Ill_150bpfermikitraw_1740:HG3_Ill_250bpfermikitraw_1818:HG3_Ill_FB_1261:HG3_Ill_GATKHCSBGrefine_913:HG3_Ill_GATKHC_2256:HG3_Ill_Krunchall_1902:HG3_Ill_Spiral_1466:HG3_Ill_scalpel_1409:HG3_Ill_svaba_1709:HG4_Ill_250bpfermikitraw_1812:HG4_Ill_GATKHCSBGrefine_938:HG4_Ill_GATKHC_2200:HG4_Ill_Krunchall_1961:HG4_Ill_scalpel_1272:HG4_Ill_svaba_1690;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0943396;ClusterMaxSizeDiff=0.0754717;ClusterMaxEditDist=0.222222;PBcalls=5;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=19084;DistForward=56;DistMin=56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=69;REFWIDENED=1:244162024-244162092;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:14:0|1:23:4:4:14:./.:30:0:3:49:0/1:19:24:./.:.:.:.:.:.
chr1	244643943	HG3_Ill_250bpfermikitraw_1825	T	TCCCAGCTACAGGCATGAGCCTGTAGCTTTACTGAAGACATGAGCTTCAATAAAACTACAG	20	PASS	ClusterIDs=HG3_PB_HySA_2108:HG3_Ill_manta_296:HG3_Ill_svaba_1717:HG3_Ill_250bpfermikitraw_1825:HG3_Ill_150bpfermikitraw_1746:HG2_Ill_svaba_1681:HG2_Ill_250bpfermikitraw_1838:HG2_Ill_150bpfermikitraw_1695:HG3_Ill_Spiral_1470:HG3_Ill_Cortex_305:HG2_Ill_manta_382:HG2_Ill_SpiralSDKrefine_1331:HG2_Ill_Cortex_630;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1695:HG2_Ill_250bpfermikitraw_1838:HG2_Ill_svaba_1681:HG3_Ill_150bpfermikitraw_1746:HG3_Ill_250bpfermikitraw_1825:HG3_Ill_svaba_1717;NumExactMatchSVs=6;ClusterMaxShiftDist=0.198198;ClusterMaxSizeDiff=0.198198;ClusterMaxEditDist=0.36036;PBcalls=1;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=45087;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=1:244643942-244643944;PctSeqSimilarity=0.9391;PctSizeSimilarity=0.8833;PctRecOverlap=0.8689;SizeDiff=7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=89;MatchId=432.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:17:./.:9:12:23:5:0|1:45:0:2:42:0/1:21:22:./.:.:.:.:.:.
chr1	244881969	HG4_Ill_150bpfermikitraw_1773	T	TATATACACACACACACACACACACACACACATATACACATACACACACACACAC	20	PASS	ClusterIDs=HG2_Ill_Krunchall_1887:HG2_PB_pbsv_1359:HG2_PB_HySA_2653:HG4_Ill_GATKHC_2210:HG4_Ill_GATKHCSBGrefine_942:HG2_Ill_GATKHC_2221:HG2_Ill_GATKHCSBGrefine_915:HG4_PB_pbsv_1379:HG4_Ill_manta_336:HG4_Ill_Krunchall_1972:HG4_Ill_250bpfermikitraw_1823:HG4_Ill_150bpfermikitraw_1773:HG3_PB_assemblyticsfalcon_2040:HG2_Ill_manta_384;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_Krunchall_1887:HG4_Ill_manta_336:HG4_Ill_Krunchall_1972:HG4_Ill_250bpfermikitraw_1823:HG4_Ill_150bpfermikitraw_1773:HG3_PB_assemblyticsfalcon_2040:HG2_Ill_manta_384;NumExactMatchSVs=7;ClusterMaxShiftDist=0.211382;ClusterMaxSizeDiff=0.211382;ClusterMaxEditDist=0.248062;PBcalls=4;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=45;REFWIDENED=1:244881970-244882014;PctSeqSimilarity=0.9167;PctSizeSimilarity=0.8438;PctRecOverlap=0.7385;SizeDiff=-10;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=83;MatchId=433.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:35:0|1:17:2:3:25:1|0:2:50:31:0:0/1:22:13:./.:.:.:.:.:.
chr1	245104717	HG2_10X_SVrefine210Xhap12_1052	C	CGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGTCGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAATTAGCCAGGCGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1052:HG4_PB_pbsv_1382:HG4_PB_HySA_2078:HG3_PB_HySA_2117:HG2_PB_HySA_2658:HG4_Ill_manta_337:HG3_Ill_Spiral_1471:HG3_Ill_GATKHCSBGrefine_919:HG4_Ill_MetaSV_416:HG4_Ill_GATKHCSBGrefine_944:HG2_Ill_MetaSV_405:HG2_Ill_GATKHCSBGrefine_919:HG2_PB_PB10Xdip_1392:HG2_PB_pbsv_1361:HG2_PB_SVrefine2PB10Xhap12_1108:HG4_PB_SVrefine2PBcRDovetail_749:HG3_PB_pbsv_1342:HG4_PB_SVrefine2Falcon1Dovetail_868:HG3_PB_SVrefine2PBcRDovetail_745:HG4_Ill_SVrefine2DISCOVARDovetail_1018:HG2_PB_SVrefine2Falcon2Bionano_438:HG2_Ill_SVrefine2DISCOVARplusDovetail_1086;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1052:HG4_Ill_SVrefine2DISCOVARDovetail_1018:HG2_PB_SVrefine2Falcon2Bionano_438:HG2_Ill_SVrefine2DISCOVARplusDovetail_1086;NumExactMatchSVs=4;ClusterMaxShiftDist=0.152091;ClusterMaxSizeDiff=0.150376;ClusterMaxEditDist=0.302158;PBcalls=12;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=134;DistBack=4168;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=1:245104718-245104753;PctSeqSimilarity=0.9931;PctSizeSimilarity=1;PctRecOverlap=0.9259;SizeDiff=0;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=97;MatchId=434.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:0|1:21:3:3:24:1|0:0:5:27:0:0/1:21:12:./.:.:.:.:.:.
chr1	245362243	HG4_PB_pbsv_1384	A	AGTCGGCCGCGTCGGGGAGGTGGGAGAGTGTGGTTGCTGAGCTGAAGCTGAGCTGAGCTGCAGTCCCAAGCGGGGGTGGGGAGGTGAGGGGGGTGGGGGGTGGGGGGTGGTGGGGATAGGTGGGGGGTGGGTGGGGGGGTGGGGGGGAGTGGGCGGTGG	10	PASS	ClusterIDs=HG4_PB_pbsv_1384:HG2_PB_pbsv_1363:HG2_PB_PB10Xdip_1395:HG3_PB_pbsv_1344:HG2_PB_SVrefine2Falcon1plusDovetail_932:HG2_PB_SVrefine2PB10Xhap12_1111:HG4_PB_SVrefine2PBcRDovetail_751:HG3_PB_HySA_2122:HG4_PB_HySA_2083:HG2_PB_HySA_2663;NumClusterSVs=10;ExactMatchIDs=HG4_PB_pbsv_1384;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0716612;ClusterMaxSizeDiff=0.0716612;ClusterMaxEditDist=0.24359;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=158;DistBack=-1;DistForward=4;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=1:245362244-245362244;PctSeqSimilarity=0.9352;PctSizeSimilarity=0.9747;PctRecOverlap=0.956;SizeDiff=4;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=95;MatchId=436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:0:21:1:19:./.:5:4:7:0:./.:14:1:./.:.:.:.:.:.
chr1	245719650	HG4_Ill_SVrefine2DISCOVARDovetail_1022	T	TCCTCCTCCTCTTCTTCTTCCTCCTCCTTCCTCCCTCCTCCTCCTTCCTCCCTCCTCCTCCTCCTTCTTCTTCTTCCTCCTTCTTCCTCCTTCCTC	20	PASS	ClusterIDs=HG2_PB_pbsv_1368:HG4_PB_SVrefine2PBcRDovetail_752:HG2_PB_PB10Xdip_1396:HG4_Ill_SVrefine2DISCOVARDovetail_1022:HG3_PB_SVrefine2Falcon1Dovetail_855;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_1022:HG4_PB_SVrefine2PBcRDovetail_752;NumExactMatchSVs=2;ClusterMaxShiftDist=0.175824;ClusterMaxSizeDiff=0.175824;ClusterMaxEditDist=0.263736;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=95;DistBack=53;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=182;REFWIDENED=1:245719513-245719694;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.8559;PctRecOverlap=0.3514;SizeDiff=-16;StartDistance=64;EndDistance=64;GTMatch=0;TruScore=71;MatchId=437.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:33:0|1:22:1:1:31:./.:13:31:17:0:0/1:19:7:./.:.:.:.:.:.
chr1	245763343	HG4_PB_SVrefine2PBcRDovetail_753	G	GTTTTGTTTTGTTTTGATACAGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGTAATGGCGTGATCTTGGCTCACCACAACCTCCGCTTCCCGGGTTCAACTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGATTACAGGCATGCGCCACCATGCCTGGCTAATTTTGTATTTTTAGTATAGAGGGGGTTTCTCCATGTTGATCAGGCTGGTCTCGACCTCCCGACCTCAGATGATCTCCCGCCTCGGCCTCCCAAAGTGCTAGGATTATAGGCTATTTTTTTTTTTTTTTT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_753:HG4_PB_pbsv_1389:HG3_PB_pbsv_1350:HG4_PB_HySA_2085:HG2_PB_HySA_2665:HG2_PB_pbsv_1369:HG3_PB_HySA_2125:HG4_PB_SVrefine2Falcon1Dovetail_872;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_753;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0767947;ClusterMaxEditDist=0.186795;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=292;DistBack=22172;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=276;REFWIDENED=1:245763344-245763619;PctSeqSimilarity=0.9597;PctSizeSimilarity=0.9637;PctRecOverlap=0.6997;SizeDiff=-11;StartDistance=-86;EndDistance=-86;GTMatch=0;TruScore=87;MatchId=438.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:30:0|1:45:2:0:18:./.:1:2:11:0:0/1:24:4:./.:.:.:.:.:.
chr1	245823596	HG3_Ill_SVrefine2DISCOVARDovetail_978	G	GGGCATGCATTAGTGCTCTAAGGAGAGGCCTTCGCTGGTTAATGTCCCCAGGTTTGGGTTGGTAGCCTACCATTTGGTATCATACTGAGCTCCCTAATTTTGAGCTACATCTAGAAGACCACGTGCCTGGTGCCAAGAAGGACACTTAGACTATGTGTGGATGGAGCTTCATCAGCTGTTCTAATGAACGTTTTGCAAAAGACCATTGTGAGTGAGATGGGAGTTTCTCTGTTTTCAAGCCCAGGGCCCTGCCTGCTGGTGTGTCCCTCTTCTGAGTCATTCAGCCTTGACCCACTCTAGGGAACCGGAGGAATCCACAGCCCAGAGCTCTCCCATGGTGGCCTGTTTGACAGTCACATTCTGAAAAAGCAAACCTCTTGGCTTGATTTCTTGCTGGAATAATGAAACCCAGCTCGGCCCCTGCTTGATAATTGCCTTTGGGAAAAAGGTAATAGCCACCTTGAAACACCATTCAGTTGGACCTTTCCAAAAGCCACGGGTTTTTCTTCACCAAAGTCCTTCATTTGAGCCTATAATCTGTGAATGGAAAGAAGCGATGATGCCTCTAAAAGCCTTTTGGTTGGAGTCAGAGTCACCCTTTGAGCACTGAGTTCTCTTTCCAGGGACCTCTCCCATGTGGTCTTGGAGCCATGGGTGTTGTACAAAAGCAACAGGCCTAGCAGAGCTACCAGTGTGTGAGCGTTTGCTGTGTGAGCCCAGGCTTTCCACAGGACGAAGATTCTCTCACCAGAGTGTGAGCATTTGCAGTGTGAGCCCAGGCTCTCTACAGGACGAAGATTCTCTTACCAGCATGTGAACATTTGCAGTGTGAGCCCAGGCTCTCTACAGGACGAAGATTCTCTCACCAGAGTGTGAGCATTTGCTAGTGTGAGCCCAGGCTCTCTACAGGACGAAGATTCTCTTACCAGCATGTGAGCATTTGCAGTGTGAGCCCAGGCTCTCCACAGGACAAAGATTCTCTTTTCACCCTCACGTCAACCTCACGTCAAGATGGGAGATAAAGAATAGCAAAATAGGGCTGGGTGTAAGCTCTGGATAGCTTCTTCGGGTATCCAGGGATAGATGCTGTGATTACTCCTATTTTATAGATGAAGAAACAGATGAAAGGAGCCCACGTCCCATGCACGATACTGGCAAGCTAGGATTCAAACACAGTGGGGCTCCAGCACCTTCCCTTTCAGTCCCCACATTAGCCTCTGGCTGAGGTGTGGGGAAAAGCTCACAGATCAGACTGGGGGGACCTGAGTTCCAGCCCCAGCTCCTCGCGGGCTGCCTGTGTGACCTGAGAGCCCCGAGGCTCCATCTGTGAAATGCAGAGGGGGTGGCAGACAGCTCGTCACGAGGAGTGAATGAGATCCTGCAGATGAAGGTATTTGGTATACTGAAGAGCTCTGAGAATGATGAAAATGATGTGCAAGTCTCTTCCAGGACTTTTTGTGTGCCTTTCGTAGTGTAATACAGACCCCGGCACATGGGTGTTCACACTTAGGGTATGACCAGCCTCACAGCTAAGTTGCTTAGCATATGGTACCAGCGAACCCAAGTTTGTAAACCAGAACTTCCCATTGCTTTCTTGATTGTCAAGTTTGACCCTGGCCAGCATCCTCTGATACACTGAAAATACACTCTGTGTGTCCAGAAGCAGCTGAGCTTTTGTCTCAGGCCAACCTCACATTCAACCCACTATCCTCCGTCTTGTTCCTCCACGAGGAAAGGGACGTGAATGCCTATAGGCCATCAGAGATGCAGGTGAAACAAACCTCAGTGCATCATTGCACGGGGCCAGATGGGGGGGCCGGTGTTTCCCTGCGGAATCCGGAGGACAGCTGTGCCAGCCACGTGTCCAGGCCCAGGATCCACAATAGGAAAGGGGTTGCTGATGCATTTCAAACTATCTCTAAAGTTGTGAGTGTATATGGCAAAATCCCATCCTACCAAGCCTTCTTGCTATATACATTTGAGTAGAAAATGACATGAGCCAGAAGCTCCAAAGCCTGAGATCCAGAGCATAAACTCCTGCTGTCATGTTGAGGCTGGGGCAGTCCAGTCGCAAGCAGTGCTCCAAAGGAATGCAGTAGGCTGTTCTCATCTTGCCGTAAAGAAATACCCGAGGCTGGGTAATTTCTAAGGAGAAAGGTTTATTTTTGGCTCACAGTTCCACAGGCTGTACGGGAAGCATGGTGCCGGCATCTGCTTCTGGTGAGGCCTCAGGAAGCTTATAATCAAGATGGAAGGTGAAGGGGGAGCAGGTGTGTTACATGGCAACAGAGGGTGCAAGAGAGAGAGAAGGGGGAGGTCCCAGACTCTTTGAAATAGCTGGATCTCATGTGAACTAATAGAGCGAGAACTCACTCATCAACAGGGGATGGCTCTAAGCCATTCAGGAGGGATCTTCCCCCAGGATCCAGCCACCTCCCGCCAGGCCCCCCCTCCAACACTGGGAATCACATTTCAACCTGAGCTTTGGAGGGTATGAACATCCAAACCATATTGGGCTCTATCGTTTTTGAGATTTTACTCACTGGGCGACAACGTAGAGCACCCACCGCTGGGCTGATATGATTTGTTCCCGTTTCCTGGGCAACCAGGTGCGCAGGGCCACGAGATGAGCCTCTTGTGACAACTAAGCCACCTTGATGATGGCTTTAACTCGGGGCCTGGAAGTCAGACTCCCATGCTTTGAGGATATTTTTTGTGGTGGTGTCATTTGTTATGAGGGTTATTCTTTTTTCTCTTGGTACTTCCCAGCCTCATTACTTCTCTGTGCCAAACTGTGCCAGGAAATCACTGACTTTATCATCATGATCATCATCATCATCACCATCACTCAAACTTTGGTAGTGCAGTGCAGTGCCTGCTAGCGCCAAGCTCTAGACTCGGTTCTTTATATATACTCAGTCATCGCATGTTCATGGCAGTCTCATGGGACCAGCACTACAAATGTGTCTAAGGAGGTTTCCTCGAAATCTCCTTTGTCACAGTGGCCTGGAGCATGCAGAAGCAGGTAACAGAAATACCAGCAGCCACTCCTGACTCATCACTGATAGTGGAACTGGTAAGGGACAAACTTGTAAATGAGCAAAGTTAGATTTCTGGGCCTCCTCACCACCTCCCCACTTAGTGCTGTGTCCCCACCCCACAGGTACCCGGTACCTTTGTGCTCTCCAAGAATGCCCCATACTGCCACTTTCCACCCCCATCCTCCTGCCTGTACCTTGTTGCAAATCCCCAACGCCCTGGGCCTCAGTTGACTCTGTACCTACCCCAAAAGGCATCTTTCCTGCAGGTGCTCCTTCCCACGAAGCCCTGTGGTAAGGTCATGTGCTGTCTTCGGTCAAATCAAAACTCCAGTATCTGATAAGAGTCTAAAGATATATGAGAGTTCCCACTATTCCCAACCTTGTCAATATTTGTATTGTTTGATTTTTAAAGTTTTTGGCCATTAGGTGAATATTTAATGGTATGTCATTGTAATTTTAATTTGCAATTTTCCTGATGACTGCTAAGGTTGAGTATCTTTTCATGTTTATTATTCTCTGTATAGTTCTTGTTCATGTCTTTTGCCTGCTTTTCTGTACAGTTGCTTAGCTTTTTGTTAATTGATTCATAGGAATTCTTTGTAAACTCTGGATACCTTCTGCAGGCACCACTCATTGAGACCCCACTGACCAGGAACGATCTTTCAGTCATTTAAGTGACTCTGTGTGGAGTTGTCTCTGGGTTCTCTAGCCCTGCGCTGTTACCACAGTCTTAATAACATTGCCCTTTGCTAATTTTCTTTAC	20	PASS	ClusterIDs=HG4_Ill_Spiral_101:HG3_PB_pbsv_1354:HG2_PB_assemblyticsfalcon_2080:HG2_PB_assemblyticsPBcR_2062:HG2_PB_SVrefine2Falcon1plusDovetail_936:HG2_10X_SVrefine210Xhap12_1059:HG4_PB_SVrefine2Falcon1Dovetail_875:HG3_PB_SVrefine2Falcon1Dovetail_857:HG3_PB_SVrefine2PBcRDovetail_748:HG3_Ill_SVrefine2DISCOVARDovetail_978:HG4_PB_SVrefine2PBcRDovetail_755:HG2_PB_SVrefine2PBcRplusDovetail_904:HG2_PB_SVrefine2PB10Xhap12_1115:HG2_PB_PB10Xdip_1400;NumClusterSVs=14;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_978:HG3_PB_SVrefine2PBcRDovetail_748;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0752253;ClusterMaxSizeDiff=0.0749641;ClusterMaxEditDist=0.138697;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=3803;DistBack=20133;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=1:245823597-245823602;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:38:0|1:18:0:0:24:1|0:0:7:32:0:0/1:33:27:0/1:128:160:.:3860:.
chr1	245961679	HG2_PB_SVrefine2PB10Xhap12_1118	A	AACACACACACGCACACACACACACACCACACATACACACACACACACATACACACACAAACACACACACATACACACCACACACACATACCCACACACACACATACATACACACACACCACACACCCCCACACACATACACACACACAAAAATACACATACACACAAACACACAAATACACACATACACACAAAAATACACATACACACAAACACACAAATACACACACAGAAATACACATACATACACACACACACCCACATACCCACACACACATACCCACACACCCACAAACACACATACACACACACACACACAAATACACACACATACATAACACACCCACACACATACACACACACAAACACACAAATACACACATACACATACAAAAATACACACATACACACACACAAATACACACATACACACACATACCCACAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_859:HG2_PB_pbsv_1377:HG3_PB_pbsv_1358:HG4_Ill_MetaSV_417:HG4_Ill_manta_340:HG4_PB_HySA_2087:HG2_PB_HySA_2668:HG2_Ill_manta_388:HG3_Ill_MetaSV_387:HG3_PB_HySA_2126:HG2_PB_PB10Xdip_1403:HG4_PB_pbsv_1394:HG4_PB_SVrefine2PBcRDovetail_757:HG4_PB_SVrefine2Falcon1Dovetail_877:HG4_Ill_SVrefine2DISCOVARDovetail_1024:HG2_PB_SVrefine2Falcon2Bionano_444:HG3_PB_SVrefine2PBcRDovetail_752:HG2_Ill_SVrefine2DISCOVARplusDovetail_1091:HG2_PB_SVrefine2Falcon1plusDovetail_937:HG3_Ill_SVrefine2DISCOVARDovetail_980:HG2_PB_SVrefine2PBcRplusDovetail_906:HG2_PB_SVrefine2PB10Xhap12_1118;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1118:HG2_PB_SVrefine2PBcRplusDovetail_906;NumExactMatchSVs=2;ClusterMaxShiftDist=0.154023;ClusterMaxSizeDiff=0.147126;ClusterMaxEditDist=0.224138;PBcalls=15;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=444;DistBack=10110;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=124;REFWIDENED=1:245961680-245961803;PctSeqSimilarity=0.9936;PctSizeSimilarity=1;PctRecOverlap=0.9528;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=98;MatchId=440.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:0:36:0:23:1/1:0:32:3:79:1/1:0:16:1/1:1:132:.:.:.
chr1	245989312	HG3_Ill_MetaSV_388	T	TGCTGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCCTAGCATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_938:HG3_PB_pbsv_1359:HG2_PB_pbsv_1378:HG4_Ill_GATKHCSBGrefine_948:HG3_Ill_MetaSV_388:HG3_Ill_GATKHCSBGrefine_923:HG2_Ill_MetaSV_408:HG2_PB_HySA_2671:HG3_PB_HySA_2128:HG4_PB_HySA_2090:HG4_PB_pbsv_1395:HG2_PB_PB10Xdip_1404:HG4_Ill_MetaSV_418:HG2_PB_assemblyticsPBcR_2069:HG2_PB_assemblyticsfalcon_2086:HG3_PB_SVrefine2PBcRDovetail_753:HG2_10X_SVrefine210Xhap12_1062:HG2_PB_SVrefine2PB10Xhap12_1119:HG2_PB_SVrefine2Falcon2Bionano_445:HG4_PB_SVrefine2Falcon1Dovetail_878:HG4_PB_SVrefine2PBcRDovetail_758:HG2_PB_SVrefine2PBcRplusDovetail_907:HG3_PB_SVrefine2Falcon1Dovetail_860;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_MetaSV_408:HG3_Ill_GATKHCSBGrefine_923:HG3_Ill_MetaSV_388:HG4_Ill_GATKHCSBGrefine_948;NumExactMatchSVs=4;ClusterMaxShiftDist=0.160991;ClusterMaxSizeDiff=0.160991;ClusterMaxEditDist=0.215289;PBcalls=17;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=325;DistBack=-9;DistForward=3050;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=1:245989313-245989312;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:21:0:24:1/1:0:5:0:7:1/1:0:23:1/1:1:34:.:.:.
chr1	246173274	HG2_Ill_SVrefine2DISCOVARplusDovetail_1095	G	GCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTGACCTCATGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACTGTGCCCGGCCAAGATCATGTTTATATAAAGTTTGTTATAAAGTTCTCTTGGTATTATCCCCAATAACAAAAACTTTAAGAAAAAAAAAACAGTATTTTTGGCCGGGCACAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATTTGAACTCAGGAGTTCAAGACCAGCCTAGGCAACATGGTGAAATCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCACACGGCTGTAAT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_1408:HG3_PB_pbsv_1366:HG2_PB_pbsv_1384:HG4_PB_pbsv_1402:HG2_PB_assemblyticsPBcR_2074:HG2_PB_assemblyticsfalcon_2090:HG4_PB_HySA_2105:HG3_PB_HySA_2141:HG3_Ill_SVrefine2DISCOVARDovetail_983:HG3_Ill_MetaSV_391:HG4_PB_SVrefine2PBcRDovetail_763:HG4_PB_SVrefine2Falcon1Dovetail_882:HG4_Ill_SVrefine2DISCOVARDovetail_1028:HG4_Ill_MetaSV_421:HG4_Ill_GATKHCSBGrefine_953:HG3_PB_SVrefine2PBcRDovetail_759:HG3_PB_SVrefine2Falcon1Dovetail_865:HG3_Ill_GATKHCSBGrefine_927:HG2_PB_SVrefine2PBcRplusDovetail_912:HG2_PB_SVrefine2PB10Xhap12_1124:HG2_PB_SVrefine2Falcon2Bionano_450:HG2_Ill_manta_390:HG2_Ill_SVrefine2DISCOVARplusDovetail_1095:HG2_Ill_MetaSV_412:HG2_Ill_GATKHCSBGrefine_925:HG2_10X_SVrefine210Xhap12_1067:HG2_PB_SVrefine2Falcon1plusDovetail_943;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_925:HG2_Ill_MetaSV_412:HG2_Ill_SVrefine2DISCOVARplusDovetail_1095:HG2_Ill_manta_390:HG2_PB_SVrefine2Falcon2Bionano_450:HG2_PB_SVrefine2PB10Xhap12_1124:HG2_PB_SVrefine2PBcRplusDovetail_912:HG3_Ill_GATKHCSBGrefine_927:HG3_PB_SVrefine2Falcon1Dovetail_865:HG3_PB_SVrefine2PBcRDovetail_759:HG4_Ill_GATKHCSBGrefine_953:HG4_Ill_MetaSV_421:HG4_Ill_SVrefine2DISCOVARDovetail_1028:HG4_PB_SVrefine2Falcon1Dovetail_882:HG4_PB_SVrefine2PBcRDovetail_763;NumExactMatchSVs=15;ClusterMaxShiftDist=0.110971;ClusterMaxSizeDiff=0.110971;ClusterMaxEditDist=0.148599;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=389;DistBack=5894;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=1:246173275-246173284;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:./.:0:0:0:15:./.:0:0:0:0:1/1:0:23:1/1:2:70:.:.:.
chr1	246187595	HG2_PB_SVrefine2PBcRplusDovetail_913	G	GGTGGACAGCATCTAGGAAGAGAGATACAGGAAGTGGACAGCATCTAGGAAGGAGATACAGGAAGTGGACAGCATCTAGGAAGGGAGATACAGGAAGTGGACAGCATCTAGGAAGAGAGATACAGCAAGTGGACAGCATCTAGGAAAACAGATACAGCAAGTGGACAGCATCTAGGAAGGGAGATACAGGAAGTGGACAGCATCTAGGAAGACAGATACAGCAAGTGGACAGCATCTAGGAAGGAAGATACAGGAAGTGGACAGCATCTAGGAAGACAGATACAGGAAGTGGACAGCATCTAGGAAGAGAGATACAGCAAGTGGACAGCATCTAGGAAGACAGATACAGCAAGTGGACAGCATCTAGGAAGGGAGATACAGGAAGTGGACAGCATCTAGGAAGACAGATACAGCAAGTGGACAGCATCTAGGAAGGAAGATACAGGAAGTGGACAGCATCTAGGAAGAGAGATACAGGAAGTGGACAGCATCTAGGAAGGGAGATACAGGAAGTGGACAGCATCTAGGAAGACAGATACAGCAAGTGGACAGCATCTAGGAAGAGAGATACAGCAAGTGGACAGCATCTAGGAAGGGAGATACAGCAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_866:HG2_PB_pbsv_1387:HG4_PB_pbsv_1404:HG4_PB_HySA_2106:HG2_PB_pbsv_1386:HG4_PB_pbsv_1403:HG2_PB_HySA_2684:HG2_PB_PB10Xdip_1409:HG4_PB_SVrefine2Falcon1Dovetail_883:HG2_PB_SVrefine2PBcRplusDovetail_913:HG2_PB_SVrefine2PB10Xhap12_1125:HG2_PB_SVrefine2Falcon2Bionano_451:HG2_PB_SVrefine2Falcon1plusDovetail_944:HG4_PB_SVrefine2PBcRDovetail_764;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_944:HG2_PB_SVrefine2Falcon2Bionano_451:HG2_PB_SVrefine2PB10Xhap12_1125:HG2_PB_SVrefine2PBcRplusDovetail_913:HG4_PB_SVrefine2Falcon1Dovetail_883;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0886076;ClusterMaxSizeDiff=0.0746624;ClusterMaxEditDist=0.250993;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=607;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1049;REFWIDENED=1:246187596-246188644;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9984;PctRecOverlap=0.8982;SizeDiff=-1;StartDistance=-61;EndDistance=-61;GTMatch=0;TruScore=96;MatchId=443.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:70:./.:0:0:0:1:./.:0:0:0:0:1/1:0:21:0/1:4:27:.:.:.
chr1	246565669	HG2_PB_SVrefine2Falcon1plusDovetail_950	T	TAACAACGCCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACCACAACCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3106:HG4_PB_pbsv_1410:HG4_PB_HySA_2116:HG3_PB_pbsv_1376:HG2_PB_HySA_2694:HG2_PB_PB10Xdip_1416:HG4_PB_SVrefine2PBcRDovetail_768:HG4_PB_SVrefine2Falcon1Dovetail_889:HG4_Ill_MetaSV_424:HG2_PB_SVrefine2Falcon2Bionano_458:HG2_PB_SVrefine2Falcon1plusDovetail_950:HG2_PB_SVrefine2PBcRplusDovetail_920:HG2_PB_SVrefine2PB10Xhap12_1132:HG2_10X_SVrefine210Xhap12_1076:HG2_PB_pbsv_1393;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_950:HG2_PB_SVrefine2Falcon2Bionano_458;NumExactMatchSVs=2;ClusterMaxShiftDist=0.139785;ClusterMaxSizeDiff=0.129032;ClusterMaxEditDist=0.244032;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=179;DistBack=6682;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=1:246565670-246565683;PctSeqSimilarity=0.9704;PctSizeSimilarity=0.9421;PctRecOverlap=0.9372;SizeDiff=-11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=444.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:53:1/1:0:22:0:5:./.:0:9:0:4:1/1:0:9:./.:.:.:.:.:.
chr1	246739502	HG4_PB_HySA_2125	A	ACCTCCAGCCTGGGTGACAAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTTCAGTGCTCAAGGTTGTATTTCTGTTTATAACTGGTGGGGGGGGGAGTTAAATTAATTTTGCCTTTGGGACAACATCACATCATGTTTTAGAAACAAACATTTCTCGCGCGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCGTGGCTAACACGGTGAAAACCCCGTCTCTACTTAAAAATACAAAAAATTAGCTGGGCGTAGTGGCGGGCGCCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGGAACCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCGCCCACTTGCG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_773:HG2_PB_SVrefine2Falcon2Bionano_462:HG2_PB_pbsv_1401:HG2_PB_PB10Xdip_1419:HG3_PB_pbsv_1386:HG4_PB_pbsv_1418:HG2_Ill_MetaSV_414:HG3_PB_HySA_2158:HG4_PB_HySA_2125:HG4_Ill_MetaSV_426:HG2_PB_HySA_2703:HG4_PB_SVrefine2Falcon1Dovetail_894:HG3_PB_SVrefine2Falcon1Dovetail_875:HG2_10X_SVrefine210Xhap12_1082:HG2_PB_SVrefine2Falcon1plusDovetail_952:HG2_PB_SVrefine2PB10Xhap12_1137:HG3_PB_SVrefine2PBcRDovetail_770:HG2_PB_SVrefine2PBcRplusDovetail_923:HG2_Ill_SVrefine2DISCOVARplusDovetail_1100;NumClusterSVs=19;ExactMatchIDs=HG4_PB_HySA_2125;NumExactMatchSVs=1;ClusterMaxShiftDist=0.07277;ClusterMaxSizeDiff=0.0657277;ClusterMaxEditDist=0.222743;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=423;DistBack=-66;DistForward=51;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=297;REFWIDENED=1:246739273-246739569;PctSeqSimilarity=0.9846;PctSizeSimilarity=0.9929;PctRecOverlap=0.9953;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=445.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:0:18:0:22:./.:2:2:2:1:0/1:2:9:./.:5:47:.:.:.
chr1	246776958	HG2_PB_PB10Xdip_1420	T	CTCTCCCCCCTCTCTCCCTCTCCCTCACCTCCTCTCTCTCTCCCCCTCTCCCTCTCTCCCTCTCTCCCTCTCCTCCTCTCCCTCTCCCTCCCCCTCCCTCTCCCCTCTCCCTCTCCCCTCTCCCTCTCCCCATCCCCCTCCCCCTCTCTCCCTCTCTCCTCCTCCCCCTCTCCCCCCTCCCCCTTCCCCTCTCCCCCTGTCTCCCCCTCTCCTTCTCTCCCTCTCCCTCACATCCTCTCTCTCCCCCTCTCCCCTCTCCCTCTCCCCCCTCCCTCTCTCCCTCACGTCCTCTCTCTCTCCCCCCTCCCCCTCCCTCTCCCCTTCCTCTCCCCCTCTCCCCCTCCTCCTCCCCCTCTCCCTCTCTCCTCTAATCCCTCTCCCTCACGTCCTCTCTCTCTCCCCCTCTCCCCCTTTCTTCCTCTCCCCCTCTCCCTCTCTACCTCTCCCCCTCTCCCTCTCCCCGTCTCCCTCTCTCCCTCGTCCTCTCGTCCTCTCTCTCTCCCCCTCTCCCCCTCTCCCTCTCCTCCTGTCCCTCTCTCCCTCTCCCCCTCCTCCTCTCCCTCTCCCCCTCCCCCTCTTCCCCTCTCCCCCTCTCTCCTCTCTCCCTCTCCCCCCTCTCCCTCTCTCCCTCTCCTCCTCTCCCTCTCTCCCTCTTCCCCTCTCCCCCTCTCCCTCTTCCCTCTCCCCATCTCCCTCTCCCCCCCTTCTCCCTCTCCCACCCTCTTCCTCTCCCTCTCCCTCCCTCTCCCTTCTCTCCCTCTCCTCCTCTCCCTCTCTCCCTCTTCCCCATCTCCCCCTCTTCTCCTCTCCCCCTCTCCCCCCTCCCCCTCTCCTCCTCTCCCTCTCTCCGTCCCCCCTCCTCCTCTCCCTCTCTCCCTCTTCCCCATCTCCCCCCTTCTCCTCTCCCCCTCTCCCCCTCCCTCTCTCCCTCTCTCCCCCTCCCCCTCCCTCTCCCCCTCCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_895:HG3_PB_pbsv_1387:HG4_PB_HySA_2128:HG2_PB_pbsv_1403:HG3_PB_HySA_2160:HG3_PB_SVrefine2Falcon1Dovetail_876:HG4_PB_pbsv_1420:HG3_PB_SVrefine2PBcRDovetail_771:HG2_PB_SVrefine2Falcon2Bionano_463:HG2_PB_SVrefine2Falcon1plusDovetail_953:HG2_PB_SVrefine2PB10Xhap12_1138:HG4_PB_SVrefine2PBcRDovetail_774:HG2_PB_SVrefine2PBcRplusDovetail_924:HG2_PB_HySA_2706:HG2_Ill_breakscan11_3107:HG2_PB_PB10Xdip_1420:HG2_PB_HySA_2705;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_1420;NumExactMatchSVs=1;ClusterMaxShiftDist=0.1083;ClusterMaxSizeDiff=0.107287;ClusterMaxEditDist=0.234476;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=960;DistBack=-58;DistForward=6;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=1:246776959-246777016;PctSeqSimilarity=0.9855;PctSizeSimilarity=0.9928;PctRecOverlap=0.9938;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=446.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:2:16:0:21:1/1:0:10:0:8:1/1:0:8:0/1:17:59:.:1876:.
chr1	246806108	HG4_PB_SVrefine2Falcon1Dovetail_896	G	GTGATATGATGATGGTGATGATGGTGGTGATGGTGGTGGTGATGATGATTGATGATGATGGTGATGATGATGATGATGGTGATGATGATGGTGATGATGGTGATGATGATGATGGTGATGATGAGGATGATGATGATGATGGTGATGATGGTGATGATGATGGTGATGGTGATGATGACGGTGATGATGGTGATGGTGATGATGGTGATGATGAGGATGATGATGGTGATGATGATGATGGTGATGATGAGGATGATGATGGTGATGATGATGGTGATGATGGTGATGGTGATGATGGTGATGATGAGGATGATGATGGTGATGATGATGGTGATGATGATGATGGTGGTGATGATGATGGTGATGGTGATGATGGTGATGATGATGGTGATGATGATGATGGTGGTGATGATGGTGATGATGGTGATGGTGATGATGGTGATGAGGATGATGATGATGGTGATGATGATGGTGGTGATGATGGTGATGGTGATGGTGATGATGGTGATGATGATGATGATGGTGATGATGGTGATGATGATGATGGTGATGATGGTGATGATGGTGATGGTTATGATGGTGATGGTGATGATGGTGATGATGAGGATGATGATGGTGATGGTGATGATAAGGATGATGATGATGAGGAGGATGATGATGGTGATGATGATGGTGATGACGATGATGGTGATGATGATGGTGATGACGATGATGGTGATTGTGATGATGGTGATGATGATGAGGATGGTGATGGTGATGATGGTGATGATGATGGTGAGGATGGTGATGATGATGGTGATGATGAGGATGGTGATGATGGTGATGATGATGGTGATGATGATGGTGATGATGATGATGGTGATGGTGATGATGGTGATGGTGATGATGGTGATGGTGATGATGGTGATGATGATGGTGATTATGATGA	10	PASS	ClusterIDs=HG2_PB_pbsv_1405:HG4_PB_pbsv_1422:HG2_PB_assemblyticsfalcon_2115:HG2_PB_PB10Xdip_1422:HG2_PB_SVrefine2Falcon1plusDovetail_956:HG4_PB_HySA_2131:HG3_PB_SVrefine2PBcRDovetail_772:HG3_PB_pbsv_1390:HG4_PB_SVrefine2Falcon1Dovetail_896:HG2_PB_assemblyticsPBcR_2098:HG4_PB_HySA_2130:HG2_PB_assemblyticsfalcon_2114:HG2_PB_SVrefine2Falcon1plusDovetail_955:HG2_PB_SVrefine2PB10Xhap12_1140:HG2_PB_SVrefine2PBcRplusDovetail_925:HG2_PB_SVrefine2Falcon2Bionano_465:HG4_PB_SVrefine2PBcRDovetail_776:HG3_PB_SVrefine2Falcon1Dovetail_877;NumClusterSVs=18;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_896;NumExactMatchSVs=1;ClusterMaxShiftDist=0.275044;ClusterMaxSizeDiff=0.273859;ClusterMaxEditDist=0.321471;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=927;DistBack=7832;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=62;REFWIDENED=1:246806109-246806170;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9989;PctRecOverlap=0.9666;SizeDiff=1;StartDistance=-31;EndDistance=-31;GTMatch=1;TruScore=98;MatchId=447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:0:32:1:27:./.:2:19:0:16:1/1:0:22:./.:16:164:.:1876:.
chr1	246873719	HG2_Ill_Krunchall_1921	A	AAAGAGGGAGCAGGCACATCACATGGCGAGAAGCTTACCATCATGGCGGAAGGCG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1084:HG4_Ill_svaba_1733:HG2_PB_HySA_2712:HG2_PB_pbsv_1407:HG2_Ill_manta_391:HG4_PB_pbsv_1424:HG4_PB_HySA_2134:HG3_PB_pbsv_1393:HG2_PB_PB10Xdip_1444:HG2_Ill_breakscan11_3110:HG4_Ill_scalpel_1299:HG4_Ill_manta_344:HG4_Ill_Krunchall_2006:HG4_Ill_GATKHC_2246:HG4_Ill_GATKHCSBGrefine_960:HG4_Ill_250bpfermikitraw_1856:HG4_Ill_150bpfermikitraw_1801:HG3_Ill_svaba_1752:HG3_Ill_scalpel_1436:HG3_Ill_manta_302:HG3_Ill_Spiral_1498:HG3_Ill_Krunchall_1939:HG3_Ill_GATKHC_2305:HG3_Ill_GATKHCSBGrefine_937:HG3_Ill_FB_1283:HG3_Ill_250bpfermikitraw_1860:HG3_Ill_150bpfermikitraw_1779:HG2_Ill_svaba_1715:HG2_Ill_scalpel_1349:HG2_Ill_Krunchall_1921:HG2_Ill_GATKHC_2261:HG2_Ill_GATKHCSBGrefine_933:HG2_Ill_250bpfermikitraw_1882:HG2_Ill_150bpfermikitraw_1728:HG3_PB_HySA_2166:HG4_PB_SVrefine2PBcRDovetail_778:HG4_PB_SVrefine2Falcon1Dovetail_898:HG4_Ill_SVrefine2DISCOVARDovetail_1036:HG3_PB_SVrefine2PBcRDovetail_773:HG2_PB_SVrefine2PBcRplusDovetail_927:HG2_PB_SVrefine2PB10Xhap12_1144:HG2_Ill_SVrefine2DISCOVARplusDovetail_1101;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1728:HG2_Ill_250bpfermikitraw_1882:HG2_Ill_GATKHCSBGrefine_933:HG2_Ill_GATKHC_2261:HG2_Ill_Krunchall_1921:HG2_Ill_scalpel_1349:HG2_Ill_svaba_1715:HG3_Ill_150bpfermikitraw_1779:HG3_Ill_250bpfermikitraw_1860:HG3_Ill_FB_1283:HG3_Ill_GATKHCSBGrefine_937:HG3_Ill_GATKHC_2305:HG3_Ill_Krunchall_1939:HG3_Ill_Spiral_1498:HG3_Ill_manta_302:HG3_Ill_scalpel_1436:HG3_Ill_svaba_1752:HG4_Ill_150bpfermikitraw_1801:HG4_Ill_250bpfermikitraw_1856:HG4_Ill_GATKHCSBGrefine_960:HG4_Ill_GATKHC_2246:HG4_Ill_Krunchall_2006:HG4_Ill_manta_344:HG4_Ill_scalpel_1299:HG4_Ill_svaba_1733;NumExactMatchSVs=25;ClusterMaxShiftDist=0.107143;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.357143;PBcalls=12;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=1;SVLEN=54;DistBack=-30;DistForward=29;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=1:246873637-246873749;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=448.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:37:1/1:3:30:1:13:./.:2:26:2:16:1/1:2:42:./.:.:.:.:.:.
chr1	247252115	HG4_Ill_Krunchall_2012	C	CCCCCACCCCCAACTCCACAAGCTGCTGACCTCCATCATAGTGCCATGCCACGTGCCAACA	20	PASS	ClusterIDs=HG2_Ill_svaba_1724:HG2_PB_pbsv_1416:HG4_Ill_manta_347:HG4_PB_pbsv_1431:HG3_Ill_manta_304:HG3_PB_pbsv_1402:HG3_Ill_Spiral_1502:HG2_Ill_manta_393:HG2_Ill_SpiralSDKrefine_1365:HG4_PB_HySA_2143:HG2_PB_assemblyticsfalcon_2126:HG4_Ill_GATKHC_2252:HG4_Ill_GATKHCSBGrefine_963:HG3_Ill_GATKHC_2317:HG3_Ill_GATKHCSBGrefine_941:HG2_Ill_GATKHC_2269:HG2_Ill_GATKHCSBGrefine_937:HG3_PB_assemblyticsfalcon_2113:HG2_PB_HySA_2722:HG4_Ill_svaba_1740:HG4_Ill_Krunchall_2012:HG4_Ill_250bpfermikitraw_1863:HG4_Ill_150bpfermikitraw_1805:HG3_Ill_svaba_1765:HG3_Ill_Krunchall_1949:HG3_Ill_250bpfermikitraw_1869:HG2_Ill_svaba_1725:HG2_Ill_Krunchall_1929:HG2_Ill_250bpfermikitraw_1891:HG2_Ill_150bpfermikitraw_1736:HG4_Ill_svaba_1739:HG3_Ill_svaba_1764;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1736:HG2_Ill_250bpfermikitraw_1891:HG2_Ill_Krunchall_1929:HG2_Ill_svaba_1725:HG3_Ill_250bpfermikitraw_1869:HG3_Ill_Krunchall_1949:HG3_Ill_svaba_1765:HG4_Ill_150bpfermikitraw_1805:HG4_Ill_250bpfermikitraw_1863:HG4_Ill_Krunchall_2012:HG4_Ill_svaba_1740;NumExactMatchSVs=11;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.14876;ClusterMaxEditDist=0.294574;PBcalls=7;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=-25432;DistForward=1;DistMin=-25432;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=1:247252107-247252172;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9833;PctRecOverlap=0.9016;SizeDiff=1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=95;MatchId=449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:30:0|1:23:5:3:22:./.:1:14:12:0:0/1:19:21:./.:.:.:.:.:.
chr1	247286841	HG3_PB_SVrefine2PBcRDovetail_779	G	GTATCGAACACTGGTTTCCTAAATTAGCAAATCGACCATTTCCTCAGGTTATTCCACGTTCTTCCAAGATGCGTCAGAAGCATTCTCTGGAGGCAGTTGTTCCAAATGGTGAAGAGTACTAGATGGATCCCAATCTCACAGGATTCTTGCTTCTATTGCAGAAGAGTTACTTTCCAGGACTTCAAAGGTTTAGAGAAGCTGCTTGATTCGTGTGGCTTGCAGAGGTGCATGGGCTTTGGAGTCACGAAGTTAATCCTGAGTCCCAGCCCAGCCTCTTAGTAGCTGTGAGGCTTTGCACAACTTCCTTGTCTTGGAAAGTTATATAAACCTCATCTGCAAGAAAAGGCATGATACTGATTGCAAAAATGGCAGCAACTCTTCATCCCTTCCTGTATTTATGCCCTTTGTGATGTGCTTTTAGCTGGGACCACAGGCACCCGCCACCACGCCCGGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGTTCACTGTAAGCTGCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAATAGCTGGGACTACAGGTGCACACCACCACGCCCGGCTAATTTTTTATATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATAGTCTCGATCTCCTGACCTCGTGATCAGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAACCACCATGCCCGCTCTATCTATCAGATTTCTAACTTAAAAGACTGATCATGTCAAGTGTTGACAAAAGTGTGGAGGATCTGGAGCCCTCATACACTGTTGGTGGGGGAGCGGACTGATGAGACTGCTTTGGAAAATGGTTTATCAGTTCCTTAAAACGTTAAACATACCTACCATATGATCCAGACTTTCTACCCCTGTGTATTTACCTGGGAGAGGGGGAAGGCATATGTCCACACTGGGGCTCGTGCACGGATGTTCATACCAGCTTGTTTTTTTTTTTTTTTTCTTCTTCAGCTTTTCTGAGGTATAGTTGACAAATATAAATTACAGCAGCTTTTTTTTTTTTTTTTTTTTGAGATAGGGTCATGCCATGTTTCCCAGGCTGGACTTGAACTCCTATGCTCAAGCAATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACATGCTACCCCACCTGGCTTGCAGCCTATTTATTTATGTAGAGGCAGGGTGTCACTCTGTTGTCCGGGCCGGAGTACAGTGGCATGATCATAGTTTACTGCAGCTTCAAACTCCTGGGCTCAAGTGATCCCGCCGCCTCAGTCTCCTGTGTAGCTGGGACCACAAGCACAAGCTTCCAGGCCTGGCTAATTTTTGTATTTTTTTCGTAGAGACAGGGGTCTTGCTATGTTGCAAGGATGGCCTCAAACTCCTGGCCTCAAGTGATCCTCCCACCTTGGCTTCCAAAAGTGCTGGGATGATAGGCGTAAGCACCTTGCCCAGCCTACAGCTTTATTTTTAATGGGCAAGAGCCAGAACCAATCCAATGGCCAATCAACAAGTGAATGGGTGGACAAACTGCTGTGTATTCACACAATGCAATGAACTCAGTACGTGTGCCTTTTTTTTTTTTTTTTGAAACGGAGTCTCGCTCAGTCACCCAGGCTGGAGTGCAGTGGTGCGATCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCCGCCCGCCTGCGATGTGGATCGTAATATCCAGAGGGGAAGAGGGGGGTGATATTACTCAATTACTCCTAGGATCTTTTCTCTACTGCCACACTTGGTTAACACCCTGGGACATTATTTTCCATATTCTAGCAAGATGCCACTACTAAAGTCACAGGGGTATACACCCTGTGATATTATGTGTCATATTATAGGGGAATGTTAATCCTGATGTCACAGGACTCTACACACTGTGATATTATTCCCAATATCCTAGCGGGACATTAATAATAATGTCACATTGTGTGTACAACTTGTGTTGTTATTCTTAATCTCCTAAGTGGAGGTTATTTTTATTGTCAAACGGGGTATGTTCCCTTTGATATTATTAATAATATCCTAGAGGGACGTCATTCCTTATGTCACAGGGTTTGTACACCTTGTCAAATTACTCACATTATCCTTATGTCACTCCTCATATCACAGAGGGTGTACACTCTGTGATATTGTCGTCATATTCTACAGAAATGTTACTTTTAATGTCACAGAGGGTGTACACCTTGTGAAATTATTCCTTATAGTTTTGTGGGATGTTACCCCTAATGTCACACAGGGTGTACGCACAGTGGTATTACGTGCAATATTCTATAGAAATGTTACTCATAAATCACAGGTCCTGTACACCCTTTAATATTCTTCATAATATTCTAGGAAAACGTTACTACTAATGTCACAGGGCGTGTGGGCCCTGTCATAAAATTCGTAATATCCTAGTGGGAGTTCACTACTAATTTCACAATGCGTGTACACTCTTTGATATTATTCGTATTATCCTGAAGAGATGTTACTACTGACGTCCCAATGCAGGTACATTCTCTGATATTATTCGTTACGTCCTTGGGGGATGTGACTTCTAATGTCACACGGGGTGTACTCCCTGTGTTCTATTTCCTAATATCCTAGGGCAATTTTACTGTTAATGACACGGGGGTGTACACATTGTGATATTATTCATGATATTCTAGAAGGATGTTACTCCTAATGTCACAGGGGTGTACACACTGTGATAGTATTCATAATTTCCCAGGGGTCTATACTCCTACTGTCACAGAAGATAACACCCTGTGACATTATTCGTAATATTCTAGCGAGATGATACTCCTGATGTCACAGGGGGTGTATACCCCGTGATGATATTCTTACTATTCTAGGAGGATGCTACTCTTAATGTCACAGGTGTGTTCCTTCTGTGATATTACTGAAAATATGCTAGAAGGACATTACTACTAATGTCACAATGCATGTACACCTTGTGATATTATTAGTAATATTCAGGGGGGATGTTACTCCTAATGTTACACGGGTCTACACCGTGTGATATTGCTCCCAATATTGTAGGGGGATGTTACTCCTAATGTCACAGGGGGTGTACACCCTTCGATATTATTTGTAATCTTATAGATATACATTACTTCATATATCACAGTGGGTGTACACACATGGGTACACCCACTGGGATATTATTTGTAATATCTTCAAGAGATATAACTCCTAATATTACAGTAGGTGTACCCCATGTGTGTACACCCTATGATATTATTTGTAATATCCATGGTAAACATTACTTCTAGTAACCCACAGAGGTTACACCCTGTGATATTTTTCATAATATCATAGGGAGATATTGCTGCTAATAACATAGTGGGTGTACACCATGTGTGTACACTCTGTGATGTGATAGCTTATACCCTAGGGAGATATTCCTTCTAATATCCCAGTGAGTTGACACCCTGTGATATCATTCGTAATATCCTAGAAAGATGCTGCTGCTAATATCACAGAGGGTGTGCCCCCAGTGACATTATTCGTAATATCCTAGGGAGATGTTACTCGAAATGTCACAGACGGTGTACACCCTGTTATATTATTCATAATATTCTAGGGGGTTATTACTTTTAAAGTCACAGGGGTGTACACCCTGTGTTATTATTAGTAATATTCTAGGGGGATTTTACTTTTAAAATCACAGGGGGTGTCAACCCTGGGATCTTATTCGTAATATCCTAGGAAGATATTACTCGTAATGTCGCATGGGTGTACACCCTGGGATATTATTTCGAATATCCTAAAGGGATGTTATCTTGATGTCATAGGGTGTGTACACCCCTTGATATTATTCATAATATCCTAAGGAGATATTACTTTAAAAATCACAGTGGGTGCACACACATGGTGTACACCCTGTGATATTATTCGCAAGATTTGAGGGAGGTATAACTTTTAATATCACAGTGGGCATACACACTGTGATATTATTCGTCATATTGTAGAAGTATATTATTCCTATTGTCACAGGGGTTTAACATCTTGTGAAATTATTTGTAGTAATCCAGGGGGATGATTACCCTAAAGTCGCAGGGTGTGTACACCCTGTGATATTATTCGTAATATTCTAGGGGGATGTTACTCCTAATGTCACAAATGTGTGTATGCTGTGATATTATTCACAATCTACTAGCTGGATATTGTTGCCAATGTCACAATGTGTGTACACCTTGTGATATTATTCGTAATATCCTAAGGGGATGTTACTCCTATCGTCACAGGGGGTGTTTTCTGTGCTACGATTCGTAGTATCCCAGAGGGATGTTACTTCTACCATACAAATTGTGTACAGTTTGTTATATTATTCGTAATATCTTAGAGTGATGTTACTCCTCACGTCATGGGGGTGTACATCCTGTGATGTTAGTCTTCACATTCTAGGAAGATGTTTACTCCTAATATCACAGAGAGTGTACAATCTGTGAAGTTATTCATAATCGTTTCGGGGGGTGTTACTCCTAATGTCACACGTGGTGTACAAACCGTGATATTATTTGTAAAGTTTTTTTGGATATGTTACTCCTAATATCTCAGGGGCTGTACACACAGGTGCTGTGTGTCATACTATTCGTAATATCCTAAAGAAATGTTACCACTAATGTCACAGGCGGTGTACACCATGTGGTATTATTCCCAATATTGTAGGGTGATGTTACTCCTAATGTCACAGAAGGTCTTCACACTCTGATAATATTTGTAATACCCTAAATGGATGTTACTACTGACGTCACAATGCAGGTACACAATCTGATATTATTTCTTATATCCTCGGGCGGTGTTACTTCTAATGTCACAGCGGGTGTACATTTTTCGATATTATTCGTAATATTTTAGAAAGATGTTACTCCTAATGTCACAGAGGGTGTACACCCTGTGAAGTTATTCATAATAGTTTTGGGGGCTGTTACTCCTAATGTCACCCGTGGTGTACAGTGAATATTATTCGTAATATTTTATGGAAATGTTACTCCTAATATCCAGGGGCTGTACACCTTGTAATATGATTCATAATATCCTAACGAAATGTTGCCTCTAATATCACAGGGGGCGTACACCGTATGATATGGTTCCCAATATTGTAGGGGGATGTTACTCCTAATATCACAGGGGGTGTTCACACTGTGATAATATTCGTAATATCCTAAATGGATGTTACTGCTAATGTCACAACACGTGTACATCCTCTGTATTTGTTCATTATATCCTCGGGGGAGGTTACTCCTACTGTCACACGGGGTGTAATCCCTGTGATATTATTCATAATATCCTAGGTGGATGTTACTCCTCCTGTCATAGGGGCTGTGCGTTTTGTGATATTATTCACAATATCCTAGAAAGATGTTACTCCTCAGGTCACAGGGGATGTACACCCGTGATATTATTCGTACTATCAAAGGGAACGTTACTCCAAATGTCACAGAAGGCGTGTACACTCTGTGATGCTACTTGTAATGTGTCAGGGAAACGTAGTCCTAATGTCACAGGGCATGTGCACCATGTGTGCACAGCCCCTGTGATGTTATTTGTAATATTCTCGAGGGATGTTAATCCTAATATTCCATACGCTGTTAACCATGTGTGAACACCTTTGTGGTATTATTCCTAACATACTAGAAGGATGTAACTCCTAACATCACAGGAGATCGAGACCATCCTGGCTAACAGGGTGAAATCCCATCTCTACTAAAAATACAAAAAAAATTAGCCGGGCATGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGGGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATGGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAGAATGGCTTCAAATTGTAGTCAGCTGTTTCGTTAAATTGCAGCAGGAAGAAATTTCTCTCAGCAGGTCTATTTTCATGCCACTTGCTTTCAGAGTAAGAGGTTATTTCAGACACAGTGGTTTGATTTAGTCTTTGTTGAAAATCATAAATAGCCTACAAACAACAAAAAGGGATGAATAGGATTTGCGTTCATGTGGAGTGCGTCATCTGTGCTTTTAAATTTATCCTATGAAAAGAAATAAAAAATATGTAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_783:HG2_PB_assemblyticsfalcon_2130:HG3_PB_assemblyticsfalcon_2115:HG2_PB_assemblyticsPBcR_2110:HG2_PB_PB10Xdip_1459:HG2_PB_HySA_2726:HG2_PB_HySA_2725:HG2_PB_SVrefine2Falcon2Bionano_474:HG2_PB_SVrefine2Falcon1plusDovetail_965:HG3_PB_SVrefine2PBcRDovetail_779:HG2_PB_SVrefine2PBcRplusDovetail_934:HG2_PB_SVrefine2PB10Xhap12_1153:HG4_PB_SVrefine2Falcon1Dovetail_907:HG3_PB_SVrefine2Falcon1Dovetail_884;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_779;NumExactMatchSVs=1;ClusterMaxShiftDist=0.132943;ClusterMaxSizeDiff=0.132943;ClusterMaxEditDist=0.165115;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=6244;DistBack=1072;DistForward=456;DistMin=456;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=462;REFWIDENED=1:247286842-247287303;PctSeqSimilarity=0.9989;PctSizeSimilarity=0.9997;PctRecOverlap=0.9327;SizeDiff=2;StartDistance=-419;EndDistance=-419;GTMatch=0;TruScore=97;MatchId=450.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:39:0|1:20:0:0:31:1|0:0:15:11:0:0/1:10:12:0/1:143:230:.:4905:.
chr1	247362990	HG4_Ill_GATKHCSBGrefine_965	G	GACAGAACCTTTAGAATATTTGGGAAGTATTTTAAATTTGTGAGGCCCTAGCTTCACTACCTAATACCACTGAATCAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_1408:HG2_PB_assemblyticsfalcon_2133:HG3_PB_HySA_2173:HG2_PB_assemblyticsPBcR_2113:HG2_PB_PB10Xdip_1467:HG4_Ill_GATKHC_2258:HG4_Ill_GATKHCSBGrefine_965:HG3_Ill_GATKHC_2322:HG3_Ill_GATKHCSBGrefine_944:HG2_Ill_GATKHC_2274:HG2_Ill_GATKHCSBGrefine_939:HG4_Ill_250bpfermikitraw_1871:HG3_Ill_Krunchall_1955:HG2_Ill_Krunchall_1933:HG2_Ill_250bpfermikitraw_1897:HG2_Ill_150bpfermikitraw_1741:HG4_PB_HySA_2152:HG2_PB_HySA_2734:HG4_PB_pbsv_1438;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_939:HG2_Ill_GATKHC_2274:HG3_Ill_GATKHCSBGrefine_944:HG3_Ill_GATKHC_2322:HG4_Ill_GATKHCSBGrefine_965:HG4_Ill_GATKHC_2258;NumExactMatchSVs=6;ClusterMaxShiftDist=0.120482;ClusterMaxSizeDiff=0.0963855;ClusterMaxEditDist=0.283951;PBcalls=8;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=78;DistBack=76;DistForward=20280;DistMin=76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=164;REFWIDENED=1:247362912-247363075;PctSeqSimilarity=0.9728;PctSizeSimilarity=0.9512;PctRecOverlap=0.8434;SizeDiff=-4;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=92;MatchId=451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:1/1:1:7:1:8:./.:13:3:10:1:0/1:28:28:./.:.:.:.:.:.
chr1	247574178	HG2_10X_SVrefine210Xhap12_1096	AT	CCCGCCACCACACCTGGCTAATTGTTGTATTTTTTGTAGAGACAGGGTTTCACCATATTGCCCAGGCTGGTCTTGAACTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAAGTCATGGGATTACAGGTGTCCAGCTCGGGATTAATTTCTAACATGAATTTTGGAGGGACGCCATTATTCAAGCCATAGCAGCTTGGGTACTAGCCTCCTTCTCCACTGCGTCTGGCACCACATCCTCACCCCAGCGTCAGCCCTCCTCGGATTCCCAGTCATCCCAAAAACTTCTGTTTCTTTCTTGGGACTGAGCCATGCAGCGTTTTGTGAGTATGTCCTGGCCTGCTCACCTGGCACCTGGGTGCCAATTCCTTGTTGTTTTAGAAGCGAGGTTTCTTTCTCTGAGAGGCATACACTTTCTCTGGGCCACGTCGGGACCACGAGGTGTGTTGTCCCCTGCTAGACCTCGTAGGTTCTGTGCCTAATGGTTGCTGGTCTGATCACCTATGGGATCTGCTGTACTCCTGTTAAAATACTATGCTGCCTCACAGGGCAGAGCACGTGCCTAGCCTTAGGCAATTTATGCCCTGACTTTAGGAAGAATTGGCACCTATTGGGGAAGAAGGACATTTTAAAAAGGGAGCATTGCTACATGGAGAACTGGTGTGATGACAGTGGTTGAAGAGGCTGGAGAGACCCACTGTCAGTAGCATCTTATTCCAAGGCCACCAAAATCATACCAACTTGATATCTGCTCTAGGAAACACCTCCTTTTCTCTTTATTTATTTATTTATTTATTTATTTAATTTTATTTTTTTTGAGACAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCCCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCGCCACCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATCTTGGTCAGGCTGGTCTCCAACTCCTGACCTCAGGTGATCCACCCGCCTCTGCTTCCCAAAGTGCTGGGCTTACAGGCGTGAGCCACCCCACCCAGCCTCCTTTTCTCTTTTTTAAATCACAAAGTTATATATGCTTGTTGGAAAAAAAGGCAATCAATACAGAAACGAATAAGGTCTAGAAAATATAAGTCCTCTCTGTTTTCCTATTTCCTGTATCGAGTTTCAAATACAGATCTTCCTGATTCGTCTACACATGTACTAGTCAGTGCAAATATGTGTTTTATTTTATCTTTTCTCTTTTTATTATATTTATTTAAGGTGCACAACATGATGTTTTGGTACACATACGCATAGTGAAATGATTACTACAGTCAGGCAAATTAACATATGCATTGCCTCACAGTTTAGTGGTTTTTTTTTTTTGAGCATAGTAAGAACTCCTAAAATCTCTCTTAGCACATTTGTAATATACAATCCTATGAACTATGGTCCTCATGCTGCACATTGCATCTCTAGTCTCATTCATCCCTCTCATTTCCTCCTTCTGGTTGCTACCATTCTACTTTGTTTCTATGTATTTGACCTTTTAAAGATTGCACATGTAAGCCTGATCACGCAGTATTTGTTTTTCTGTGCCTGGCTTATTTCACTTAGCATAGTGTCCTGCAGGTTCATCATGTGATACATTTTAAAAATCTCTCCCTCTCTATGTGTAGACTTAGCCCGACTTGCCTGATATCTGATAGAACACTATTGTGCCCTTGCAGGCGACAGAGCTGTCAGACCAGGGCTGACAAGCAGAATCCCCTTTGCAGTAGCAGCTCCTCACGTGTGCTTTCTAAGCCCTTAAAATGCTACTGTGTGGGGCAGTGTGGTTTTGAGCAAATGAAAAGCAGCTCCGGCCTCTGCAGCCTAAGAGAATGTCTCCTTCAGGCAAACAATTTGTCTTCTCGTTGCTCACTGAGAAGGGTAACCACCTCCTCCCCAGGCTGACAGTGGAGTGATCAGCACATCATTGGACAGAGAAAGGAGTGGTGAGCAGTGGGAGCTGAGCTGACGGTTATATGCAGGGTTAGCGCTGCCCTGCAGTATTATTACTGCTCTGTTTTTTCTCACTATGTTGCCTGGCCTGGACTCAAACTCCTGGGCTCAAACAATCCTCCTGCCTCAGCTTACTGCTCTGTTTTGGACTTTCCAGGGGAATCTTGACTTACAGTGTTTTAGGTCTTGTTCCCTCACCTATACTTCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTGAGACAGGGTCTCGCTCTGTCACCAAGGCTGGAGTACAGTGGTGCACTCATAGCTCACTACAGCCTTGAACTCCTGGGCTTAAGTGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGAGACTATAGACACACAACACCACACCTGGCTGATTTTGTTTTTATTTTCTCTTTTGTAGAGATGGAGGTCTCACTGTCTTTTCCAGGCTAGTCTTGAACTTCAGGGCTCAAGCAACCCTCCCACCTTGGCCTCCCAAAGTGATGGGATTACACGCATGAGCCATTGTGCCCAGCCCCACACCTATACTTCCATGTCTTGTGTCTGGATTTTGGGTTCAGAAAGCTCCTGTGATATTTCCTAACCTACTTCTACCCATGAAAACAGGGCTTTTCCCAGTCTCCATACAACCGACCCAGCCGTTTCTTTTCCCCTTACCCTCTGGGTCTTACACCAGCTATTAATTCCTCAGTGTGTGTTTACAGTTTTGCTTGTTTGTTTCCTCTGCTGTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_889:HG4_PB_pbsv_1444:HG2_PB_pbsv_1428:HG4_PB_SVrefine2PBcRDovetail_788:HG2_PB_SVrefine2Falcon2Bionano_476:HG2_PB_assemblyticsPBcR_2122:HG2_PB_SVrefine2PBcRplusDovetail_940:HG2_10X_SVrefine210Xhap12_1096:HG2_PB_SVrefine2PB10Xhap12_1159:HG2_PB_PB10Xdip_1478:HG4_PB_assemblyticsfalcon_2060:HG4_PB_SVrefine2Falcon1Dovetail_913:HG2_PB_SVrefine2Falcon1plusDovetail_971:HG2_PB_HySA_2749:HG3_PB_assemblyticsfalcon_2127;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1096:HG2_PB_SVrefine2PBcRplusDovetail_940:HG2_PB_assemblyticsPBcR_2122;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0754976;ClusterMaxSizeDiff=0.0754976;ClusterMaxEditDist=0.182397;PBcalls=14;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=2807;DistBack=4407;DistForward=1165;DistMin=1165;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:247574180-247574177;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9996;PctRecOverlap=0.9993;SizeDiff=-1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=452.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:55:./.:27:12:2:16:0|1:29:0:0:12:0/1:31:21:0/1:98:188:.:2891:.
chr1	247590763	HG4_PB_SVrefine2Falcon1Dovetail_914	C	CACTCTCACTGAAGCCCCGGTAGGAGGCTCAGCACCCATTTCTCTAGATAGCACCTTCCTTCCTCTGAGGACAGATTCTGACTGGAGCCCTGGTAGGGGGCTCAGCACCCATCCCTCTAGATGGCACCTGCCTTACTCTGAGGACAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_972:HG4_PB_pbsv_1445:HG2_PB_HySA_2750:HG3_PB_pbsv_1415:HG2_PB_PB10Xdip_1479:HG2_PB_pbsv_1429:HG4_PB_SVrefine2PBcRDovetail_789:HG4_PB_SVrefine2Falcon1Dovetail_914:HG3_PB_SVrefine2PBcRDovetail_782:HG3_PB_SVrefine2Falcon1Dovetail_891:HG3_Ill_SVrefine2DISCOVARDovetail_1003:HG2_PB_SVrefine2PBcRplusDovetail_941:HG2_PB_SVrefine2PB10Xhap12_1160:HG2_Ill_SVrefine2DISCOVARplusDovetail_1107:HG2_PB_SVrefine2Falcon2Bionano_477;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1107:HG2_PB_SVrefine2PB10Xhap12_1160:HG2_PB_SVrefine2PBcRplusDovetail_941:HG3_Ill_SVrefine2DISCOVARDovetail_1003:HG3_PB_SVrefine2Falcon1Dovetail_891:HG3_PB_SVrefine2PBcRDovetail_782:HG4_PB_SVrefine2Falcon1Dovetail_914:HG4_PB_SVrefine2PBcRDovetail_789;NumExactMatchSVs=8;ClusterMaxShiftDist=0.040678;ClusterMaxSizeDiff=0.020339;ClusterMaxEditDist=0.295302;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=146;DistBack=10783;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=874;REFWIDENED=1:247590764-247591637;PctSeqSimilarity=0.9944;PctSizeSimilarity=1;PctRecOverlap=0.1837;SizeDiff=0;StartDistance=-120;EndDistance=-120;GTMatch=0;TruScore=72;MatchId=453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:1:28:1:26:./.:2:0:2:1:0/1:10:6:./.:.:.:.:.:.
chr1	247812603	HG4_Ill_250bpfermikitraw_1883	C	CAGCTCGCTTTTACACATTTTAGGGAGACAGGTGCCCAGGTAGCTGGGTTAT	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_2125:HG2_PB_PB10Xdip_1483:HG3_PB_pbsv_1421:HG4_PB_assemblyticsfalcon_2067:HG4_Ill_250bpfermikitraw_1883:HG2_PB_assemblyticsfalcon_2147;NumClusterSVs=6;ExactMatchIDs=HG2_PB_assemblyticsPBcR_2125:HG4_PB_assemblyticsfalcon_2067:HG4_Ill_250bpfermikitraw_1883:HG2_PB_assemblyticsfalcon_2147;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.153846;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=55;DistForward=56;DistMin=55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=343;REFWIDENED=1:247812477-247812819;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=454.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:1:29:1:20:./.:0:0:0:0:0/0:8:0:./.:.:.:.:.:.
chr1	248100757	HG2_PB_SVrefine2PB10Xhap12_1168	C	CCTCCTCCCCTCCCATCAGCAGCTCAGGGATGGGGCTGGCTCTGGGGCCTCCTCTTCCATCAACCCCTCAGCTACGGGGCTGGTTCAGGGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_920:HG2_PB_HySA_2761:HG3_PB_pbsv_1427:HG3_PB_HySA_2200:HG2_PB_assemblyticsfalcon_2155:HG2_PB_SVrefine2Falcon1plusDovetail_979:HG2_PB_pbsv_1439:HG2_PB_PB10Xdip_1492:HG4_PB_SVrefine2PBcRDovetail_793:HG3_PB_SVrefine2PBcRDovetail_789:HG3_PB_SVrefine2Falcon1Dovetail_898:HG2_PB_SVrefine2PBcRplusDovetail_947:HG2_PB_SVrefine2PB10Xhap12_1168:HG2_PB_SVrefine2Falcon2Bionano_482;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_482:HG2_PB_SVrefine2PB10Xhap12_1168:HG2_PB_SVrefine2PBcRplusDovetail_947:HG3_PB_SVrefine2Falcon1Dovetail_898:HG3_PB_SVrefine2PBcRDovetail_789:HG4_PB_SVrefine2PBcRDovetail_793;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0874317;ClusterMaxSizeDiff=0.0546448;ClusterMaxEditDist=0.25;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=91;DistBack=387;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=240;REFWIDENED=1:248100758-248100997;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:1/1:2:13:2:19:./.:4:0:3:0:0/1:13:2:./.:.:.:.:.:.
chr1	248567482	HG2_PB_SVrefine2Falcon2Bionano_484	T	TGCTATTACATATACGTGTGTGTGTGTGTGTATAAAATGGGAGTAACCGTGAACAGACAGCAGAGGCTATTACAAATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGCGCTACTACATATACGTGTGTGTGTATAAAATGGGAGTAAGGGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATGTGCGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACATATATGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGTGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACATATATGTGCGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACATATATGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGTGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACATATATGTGCGTGTGTATAAAATGGGACTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACATATATGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACATATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATGTGCGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACATATATGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGTGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATGTGCGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACATATATGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGTGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGGAGAGGCCGCTATTACATATATGTGCGTGTGTATAAAATGGGAGTAAGCATGAACAGAGAGCAGAGGCCGCTATTACATATATGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACCTATACGTGTGTGTATAAAATGGGAGTAAGGATGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGGGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGGGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGTGTGAACAGAGCAGAGGGCGCTATTACATATATATGTTTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACATACAGCAGAGGGCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGGATGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGAGCAGAGGGCGCTATTACATATATATGTTTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGGATGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCTGCTATTACATATAAGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCTGCTATTACATATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCTGCTATTACATATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCTGCTATTACATGTACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGCCCTATTACATATACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGCACTATTACCTATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCACTATTACATACCTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATATGTTTGTGTGTGTGTGTGTGTGTGTATAAAATGGGAGTAAGGGTGAACAGACAGCAGAGGCTATTACATATATGTGTGTGTATAAAATGGGAGTAAGTGTGAACAGAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGCCCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGCACTATTACCTATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCACTATTACATATATATGTTTGTGTGTGTGTGTGTGTATAAAATGGGAGTAAGGGTGAACAGACAGCAGAGGCTATTACATATATGTGTGTGTATAAAATGGGAGTAAGTGTGAACAGAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATATGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATATGTTTGTGTGTGTGTGTGTGTATAAAATGGGAGTAAGGGTGAACAGACAGCAGAGGCTATTACATATATGTGTGTGTATAAAATGGGAGTAAGTGTGAACAGAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACACATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGTGTGAACAGAGCAGAGGGCGCTATTACATATATATGTTTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACATACAGCAGAGGGCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGGATGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGAGCAGAGGGCGCTATTACATATATATGTTTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATGTACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGGATGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGGGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCTGCTATTACATATAAGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCTGCTATTACATATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCTGCTATTACATATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATGTACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCTGCTATTACATGTACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGCCCTATTACATATACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGCACTATTACCTATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCACTATTACATACCTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATATGTTTGTGTGTGTGTGTGTGTGTGTATAAAATGGGAGTAAGGGTGAACAGACAGCAGAGGCTATTACATATATGTGTGTGTATAAAATGGGAGTAAGTGTGAACAGAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGCCCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGCACTATTACCTATACGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCACTATTACATATATATGTTTGTGTGTGTGTGTGTGTATAAAATGGGAGTAAGGGTGAACAGACAGCAGAGGCTATTACATATATGTGTGTGTATAAAATGGGAGTAAGTGTGAACAGAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATATGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATATGTTTGTGTGTGTGTGTGTGTATAAAATGGGAGTAAGGGTGAACAGACAGCAGAGGCTATTACATATATGTGTGTGTATAAAATGGGAGTAAGTGTGAACAGAGCAGAGGCCGCTATTACATATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGCCGCTATTACATATATGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGCCGCTATTACACATACGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGACAGCAGAGGGCGCTATTACATATACGTGTGTGTGTGTATAAAATGGGAGTAAGCGTGAACAGAGAGCAGAGGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_981:HG2_PB_assemblyticsfalcon_2161:HG3_PB_pbsv_1433:HG2_PB_pbsv_1443:HG2_PB_SVrefine2PBcRplusDovetail_950:HG2_PB_SVrefine2Falcon2Bionano_484:HG2_PB_SVrefine2PB10Xhap12_1170;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_484;NumExactMatchSVs=1;ClusterMaxShiftDist=0.135027;ClusterMaxSizeDiff=0.134792;ClusterMaxEditDist=0.198405;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=8512;DistBack=20693;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=64;REFWIDENED=1:248567483-248567546;PctSeqSimilarity=0.9999;PctSizeSimilarity=1;PctRecOverlap=0.9984;SizeDiff=0;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=99;MatchId=456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:74:1/1:0:18:0:6:./.:0:2:0:0:1/1:0:35:1/1:0:185:.:8848:.
chr1	248571354	HG2_PB_SVrefine2PB10Xhap12_1171	A	ATAGATAGTGGCAGATGGTCATGGGAGTTTAGCTTGGGCTAGAGCATTTGACTGTAGATAGTGGCAGATGGTCACGGGAGTTTAGCTTGGGCTAGCGCATTTGACTGTAGATAGTGGCAGATGGTCACGGGAGTTTAGCTTGGGCTAGAGCATTTGACTGTAGATAGTGGCAGATGGTCACGGGAGTTTAGCTTGGGCTAGCGCATTTGACTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_903:HG3_PB_pbsv_1435:HG2_PB_SVrefine2PBcRplusDovetail_951:HG2_PB_pbsv_1444:HG2_PB_SVrefine2PB10Xhap12_1171:HG3_PB_pbsv_1434:HG2_PB_SVrefine2Falcon2Bionano_485:HG4_PB_pbsv_1459:HG2_PB_SVrefine2Falcon1plusDovetail_982:HG4_PB_SVrefine2Falcon1Dovetail_925;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_982:HG2_PB_SVrefine2Falcon2Bionano_485:HG2_PB_SVrefine2PB10Xhap12_1171:HG2_PB_SVrefine2PBcRplusDovetail_951;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0770975;ClusterMaxEditDist=0.334086;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=212;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=465;REFWIDENED=1:248571355-248571819;PctSeqSimilarity=0.9931;PctSizeSimilarity=1;PctRecOverlap=0.6479;SizeDiff=0;StartDistance=-75;EndDistance=-75;GTMatch=1;TruScore=88;MatchId=457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:0:43:0:7:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr1	249069902	HG2_Ill_GATKHC_2311	A	ACCCCAACTCAAGTTAATCAGTCTTATGCAAAGAAGACATTGGCTCCTGCCAGTATCTGACG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1112:HG3_PB_pbsv_1442:HG2_PB_PB10Xdip_1615:HG4_PB_pbsv_1466:HG4_PB_HySA_2173:HG2_PB_pbsv_1452:HG3_PB_HySA_2210:HG2_PB_HySA_2768:HG4_Ill_Krunchall_2041:HG4_Ill_GATKHC_2290:HG4_Ill_GATKHCSBGrefine_977:HG4_Ill_250bpfermikitraw_1898:HG4_Ill_150bpfermikitraw_1831:HG3_Ill_Krunchall_1978:HG3_Ill_GATKHC_2360:HG3_Ill_GATKHCSBGrefine_962:HG3_Ill_250bpfermikitraw_1908:HG2_Ill_Krunchall_1958:HG2_Ill_GATKHC_2311:HG2_Ill_GATKHCSBGrefine_956:HG2_Ill_250bpfermikitraw_1925:HG4_PB_SVrefine2PBcRDovetail_802:HG4_Ill_SVrefine2DISCOVARDovetail_1054:HG3_PB_SVrefine2PBcRDovetail_796:HG3_Ill_SVrefine2DISCOVARDovetail_1014:HG2_PB_SVrefine2PBcRplusDovetail_954:HG2_PB_SVrefine2PB10Xhap12_1176:HG2_Ill_SVrefine2DISCOVARplusDovetail_1118;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1925:HG2_Ill_GATKHCSBGrefine_956:HG2_Ill_GATKHC_2311:HG2_Ill_Krunchall_1958:HG3_Ill_250bpfermikitraw_1908:HG3_Ill_GATKHCSBGrefine_962:HG3_Ill_GATKHC_2360:HG3_Ill_Krunchall_1978:HG4_Ill_150bpfermikitraw_1831:HG4_Ill_250bpfermikitraw_1898:HG4_Ill_GATKHCSBGrefine_977:HG4_Ill_GATKHC_2290:HG4_Ill_Krunchall_2041;NumExactMatchSVs=13;ClusterMaxShiftDist=0.145161;ClusterMaxSizeDiff=0.129032;ClusterMaxEditDist=0.276923;PBcalls=11;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=61;DistBack=5168;DistForward=16267;DistMin=5168;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=122;REFWIDENED=1:249069862-249069983;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:26:1|0:0:27:23:1:./.:8:0:3:9:0/1:27:19:./.:.:.:.:.:.
chr1	249086202	HG2_Ill_GATKHCSBGrefine_957	A	AAGAACACACGGCTTCCTCTCCCCAGTGCTCCCAGTCAGGGGACAACTCAGAAAGATGGAAACTCTACTCTAGAGTGTTACAGCC	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_957:HG2_PB_pbsv_1453;NumClusterSVs=2;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_957;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0581395;ClusterMaxSizeDiff=0.0232558;ClusterMaxEditDist=0.127907;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=84;DistBack=-50;DistForward=66;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=428;REFWIDENED=1:249085990-249086417;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:20:./.:14:13:15:2:./.:3:0:2:6:0/1:7:8:./.:.:.:.:.:.
chr1	249191461	HG2_PB_PB10Xdip_1617	T	AAAAGTTTATCCGTCTATCATTGTTACATTTGGTTGTTCCAGTCTTGCTATTGTGAATAGTGCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATAAATTAAAAAAAAAAAAAAGAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_1617:HG2_PB_pbsv_1455:HG4_PB_SVrefine2Falcon1Dovetail_929:HG2_PB_assemblyticsfalcon_2167:HG2_PB_SVrefine2Falcon1plusDovetail_988:HG2_PB_SVrefine2PB10Xhap12_1180;NumClusterSVs=6;ExactMatchIDs=HG2_PB_PB10Xdip_1617:HG2_PB_SVrefine2PB10Xhap12_1180;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.126877;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1007;DistBack=30157;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=1:249191462-249191460;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9824;PctRecOverlap=0.9824;SizeDiff=-18;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:29:0|1:30:1:0:31:./.:21:0:3:1:./.:48:3:0/1:48:129:.:1042:.
chr2	604708	HG3_PB_SVrefine2PBcRDovetail_812	A	AACACACCACACAGCCACCACACACACCACAAACAACCCCCACACACCACACACACAACACACACACACCACACTAGACATGCACACACCCCACACACACCACACACCAGACACACACACAACACAACACATACACCACACACCACACACACTACACACCACACACAATGAACACACCACACACCAGACACACACACAACACAACACATACACCACACACCACACACACTACACACCACACACAATGAACACACCACACACCAGACACACACAACACAACAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_938:HG4_PB_HySA_2206:HG4_PB_pbsv_1485:HG3_PB_HySA_2236:HG2_PB_pbsv_1476:HG4_PB_SVrefine2PBcRDovetail_816:HG4_Ill_SVrefine2DISCOVARDovetail_1062:HG3_PB_SVrefine2PBcRDovetail_812:HG2_PB_SVrefine2PBcRplusDovetail_5399:HG2_PB_SVrefine2PB10Xhap12_1199:HG2_PB_SVrefine2Falcon2Bionano_496:HG2_PB_SVrefine2Falcon1plusDovetail_5851:HG2_Ill_SVrefine2DISCOVARplusDovetail_6264:HG3_PB_SVrefine2Falcon1Dovetail_927;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6264:HG2_PB_SVrefine2Falcon1plusDovetail_5851:HG2_PB_SVrefine2Falcon2Bionano_496:HG2_PB_SVrefine2PB10Xhap12_1199:HG2_PB_SVrefine2PBcRplusDovetail_5399:HG3_PB_SVrefine2PBcRDovetail_812:HG4_Ill_SVrefine2DISCOVARDovetail_1062:HG4_PB_SVrefine2PBcRDovetail_816;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0659722;ClusterMaxSizeDiff=0.0622837;ClusterMaxEditDist=0.196944;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=281;DistBack=8536;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=711;REFWIDENED=2:604709-605419;PctSeqSimilarity=0.9716;PctSizeSimilarity=0.9825;PctRecOverlap=0.7526;SizeDiff=-5;StartDistance=-68;EndDistance=-68;GTMatch=0;TruScore=90;MatchId=2689.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:65:1/1:3:20:0:19:./.:26:472:3:88:1/1:0:8:./.:.:.:.:.:.
chr2	665622	HG2_Ill_150bpfermikitraw_1772	A	ACCACTCACTCAGAGCAACAACCCCACATACAACAGAACCCAGAGATGCAGATGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17333:HG2_PB_pbsv_1478:HG3_PB_HySA_2243:HG4_PB_HySA_2209:HG2_PB_HySA_2800:HG3_PB_pbsv_1471:HG4_Ill_GATKHC_2315:HG4_Ill_250bpfermikitraw_1916:HG3_Ill_GATKHC_2390:HG3_Ill_GATKHCSBGrefine_973:HG3_Ill_250bpfermikitraw_1930:HG2_Ill_GATKHC_2332:HG2_Ill_GATKHCSBGrefine_962:HG2_Ill_250bpfermikitraw_1943:HG2_Ill_150bpfermikitraw_1772:HG2_PB_PB10Xdip_17334;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1772:HG2_Ill_250bpfermikitraw_1943:HG2_Ill_GATKHCSBGrefine_962:HG2_Ill_GATKHC_2332:HG3_Ill_250bpfermikitraw_1930:HG3_Ill_GATKHCSBGrefine_973:HG3_Ill_GATKHC_2390:HG4_Ill_250bpfermikitraw_1916:HG4_Ill_GATKHC_2315;NumExactMatchSVs=9;ClusterMaxShiftDist=0.12069;ClusterMaxSizeDiff=0.103448;ClusterMaxEditDist=0.288136;PBcalls=7;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=16863;DistForward=65;DistMin=65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=68;REFWIDENED=2:665621-665691;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2690.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:./.:0:0:0:0:./.:5:5:2:4:./.:2:4:./.:.:.:.:.:.
chr2	845231	HG2_PB_SVrefine2Falcon1plusDovetail_5858	G	GAAACACGGGCCACGGGACATTTCCCACGAGTGTTCACAAGGGGAATAAAAACACAGGCTGTGGGGCATTTCCCACGAGTGTTCACAAGGGGAATAAAAACACAGGCTGTGGGGCATTTCCCACGAGTGTTCACAAGGGGAATAAAAACACAGGTTGTGGGGCATTTCCCACGAGTGTCCGCAGGTGCACAGAAACACAGGTCATGGGACATTTCCCTTGAGTGTTCACAGGTGCACAGAAACACGGGCCGTTGGGTGTTTCCCACGAGTGTTCACAGATGCACAGAAACACGGGCTGTGGGACATTTCCCACGAGTGTTCACAAGGGGAATAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_939:HG3_PB_SVrefine2PBcRDovetail_817:HG2_PB_SVrefine2Falcon1plusDovetail_5858:HG2_PB_SVrefine2PB10Xhap12_1204:HG4_PB_SVrefine2Falcon1Dovetail_943;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5858:HG3_PB_SVrefine2PBcRDovetail_817;NumExactMatchSVs=2;ClusterMaxShiftDist=0.171799;ClusterMaxSizeDiff=0.171799;ClusterMaxEditDist=0.182114;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=333;DistBack=-572;DistForward=0;DistMin=-572;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=880;REFWIDENED=2:845232-846111;PctSeqSimilarity=0.9326;PctSizeSimilarity=0.8559;PctRecOverlap=0.5435;SizeDiff=48;StartDistance=-128;EndDistance=-128;GTMatch=0;TruScore=77;MatchId=2691.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:57:./.:14:8:2:35:./.:0:5:1:1:1/1:1:27:1/1:2:39:.:.:.
chr2	961048	HG2_PB_pbsv_1501	T	TACCCCAATCCTGCCTCCTGCCCCCAGTCTCTTCCTTGACCCCCAAGTCTTCTCTCCTGGTCCCCAGTCCTCCTCCTTGGACCCCAATCCTCCTCCTGGTCCCCAGTCTCCTCCTTGGACCCAATTCTCTCCTGGTCCCCAGTCCTCCTCCTGGTCCCCAATCCTCCTCCTGGTCCCCATTCCTCCTCTTGGAACCCCAAATCCTCCCTCCTGGTCCCCAGTCCTCCTCCTTGGACCCCAATCTCTCTCGTCCCCAGTCCTCCTCCTTGGACCCAATCCTCCTCCTTGGTCCCAGTCCTTCCTCCTTGGACCCCCAATCCTCCCTCCTGGTCCCCAGTCCTCCTCCTTGAACCCCAATCCTCCTTCCTTGGTCCCCAGTTCCTCTCCTGCGTCCCAATCACTCTCCTTGGTCCCCAGTTCCTCCTTGGACCCCAATCCTCCTCCTGGGGTCCCATCCTCCTCCTTGGACCACCAAAATCCTCCCTCCTGGTCCCAAGGCTCCTCCTCCTTGGACCCCAATCCTTCCTCCTTGGTCCCCGTCCTCCTCCTGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_951:HG3_PB_pbsv_1493:HG2_PB_pbsv_1501:HG4_PB_HySA_2220:HG4_PB_pbsv_1510:HG2_PB_SVrefine2PBcRplusDovetail_5410:HG2_PB_SVrefine2PB10Xhap12_1213:HG2_PB_SVrefine2Falcon2Bionano_505:HG2_PB_SVrefine2Falcon1plusDovetail_5867;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_1501;NumExactMatchSVs=1;ClusterMaxShiftDist=0.11907;ClusterMaxSizeDiff=0.117209;ClusterMaxEditDist=0.200568;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=550;DistBack=80;DistForward=17558;DistMin=80;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=332;REFWIDENED=2:960759-961090;PctSeqSimilarity=0.9541;PctSizeSimilarity=0.9927;PctRecOverlap=0.7078;SizeDiff=4;StartDistance=159;EndDistance=159;GTMatch=1;TruScore=88;MatchId=2693.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:106:1/1:6:44:0:28:./.:13:0:7:2:0/0:9:0:0/1:9:9:.:.:.
chr2	1146935	HG3_Ill_Cortex_1744	G	GTCCCATCTGTGCCAGCTCTGGGGTCAAGGTGTGCACAGGACCCTGGTGCCGGCGGGCTGTCTCTGGGGGGTGTCTGCGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17709:HG4_PB_HySA_2231:HG2_PB_pbsv_1511:HG4_PB_assemblyticsfalcon_12752:HG4_PB_pbsv_1518:HG3_PB_HySA_2276:HG4_Ill_manta_354:HG4_Ill_Krunchall_2074:HG4_Ill_GATKHC_2341:HG4_Ill_GATKHCSBGrefine_994:HG4_Ill_Cortex_1697:HG4_Ill_250bpfermikitraw_1930:HG4_Ill_150bpfermikitraw_1863:HG3_PB_assemblyticsfalcon_12979:HG3_Ill_manta_311:HG3_Ill_Krunchall_2008:HG3_Ill_GATKHC_2422:HG3_Ill_GATKHCSBGrefine_983:HG3_Ill_Cortex_1744:HG3_Ill_250bpfermikitraw_1950:HG3_Ill_150bpfermikitraw_1848:HG2_Ill_manta_407:HG2_Ill_Krunchall_1980:HG2_Ill_GATKHC_2352:HG2_Ill_GATKHCSBGrefine_967:HG2_Ill_Cortex_4057:HG2_Ill_250bpfermikitraw_1954:HG2_Ill_150bpfermikitraw_1783:HG2_PB_PB10Xdip_17710;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1783:HG2_Ill_250bpfermikitraw_1954:HG2_Ill_Cortex_4057:HG2_Ill_GATKHCSBGrefine_967:HG2_Ill_GATKHC_2352:HG2_Ill_Krunchall_1980:HG2_Ill_manta_407:HG3_Ill_150bpfermikitraw_1848:HG3_Ill_250bpfermikitraw_1950:HG3_Ill_Cortex_1744:HG3_Ill_GATKHCSBGrefine_983:HG3_Ill_GATKHC_2422:HG3_Ill_Krunchall_2008:HG3_Ill_manta_311:HG3_PB_assemblyticsfalcon_12979:HG4_Ill_150bpfermikitraw_1863:HG4_Ill_250bpfermikitraw_1930:HG4_Ill_Cortex_1697:HG4_Ill_GATKHCSBGrefine_994:HG4_Ill_GATKHC_2341:HG4_Ill_Krunchall_2074:HG4_Ill_manta_354:HG4_PB_assemblyticsfalcon_12752;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0736196;ClusterMaxSizeDiff=0.0613497;ClusterMaxEditDist=0.266667;PBcalls=8;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=79;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=80;REFWIDENED=2:1146930-1147009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2694.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:71:1/1:1:22:0:23:./.:2:17:1:21:1/1:0:24:./.:.:.:.:.:.
chr2	1193165	HG2_Ill_250bpfermikitraw_1957	A	ATATATATGTGTATATATATATGTGTATATATATATGTGTATATATATATGTGTATATATATATGTGTATG	20	PASS	ClusterIDs=HG4_PB_pbsv_1519:HG4_Ill_svaba_1812:HG2_PB_HySA_2826:HG2_PB_pbsv_1512:HG4_Ill_GATKHCSBGrefine_995:HG4_Ill_250bpfermikitraw_1933:HG4_Ill_150bpfermikitraw_1866:HG2_Ill_svaba_1797:HG2_Ill_GATKHCSBGrefine_968:HG2_Ill_250bpfermikitraw_1957:HG2_Ill_150bpfermikitraw_1785:HG4_PB_HySA_2234;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1785:HG2_Ill_250bpfermikitraw_1957:HG2_Ill_GATKHCSBGrefine_968:HG2_Ill_svaba_1797:HG4_Ill_150bpfermikitraw_1866:HG4_Ill_250bpfermikitraw_1933:HG4_Ill_GATKHCSBGrefine_995:HG4_Ill_svaba_1812;NumExactMatchSVs=8;ClusterMaxShiftDist=0.14966;ClusterMaxSizeDiff=0.14966;ClusterMaxEditDist=0.231293;PBcalls=4;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=21036;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=2:1193149-1193206;PctSeqSimilarity=0.9682;PctSizeSimilarity=0.9714;PctRecOverlap=0.4225;SizeDiff=2;StartDistance=-40;EndDistance=-40;GTMatch=0;TruScore=78;MatchId=2695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:26:0|1:27:2:1:22:./.:26:0:1:10:0/1:27:26:./.:.:.:.:.:.
chr2	1194852	HG2_Ill_GATKHCSBGrefine_969	T	TAAAAAGGTAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATGGCGTGAACCTGGGAGGCGGAGCGTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGGCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17714:HG2_PB_pbsv_1513:HG3_PB_assemblyticsfalcon_12984:HG4_PB_assemblyticsfalcon_12753:HG2_PB_SVrefine2PB10Xhap12_1220:HG4_PB_pbsv_1520:HG2_PB_SVrefine2Falcon1plusDovetail_5876:HG4_Ill_SVrefine2DISCOVARDovetail_1072:HG4_Ill_MetaSV_2486:HG4_Ill_GATKHCSBGrefine_996:HG2_Ill_MetaSV_2404:HG2_Ill_GATKHCSBGrefine_969:HG4_PB_HySA_2235;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_969:HG2_Ill_MetaSV_2404:HG4_Ill_GATKHCSBGrefine_996:HG4_Ill_MetaSV_2486:HG4_Ill_SVrefine2DISCOVARDovetail_1072;NumExactMatchSVs=5;ClusterMaxShiftDist=0.123577;ClusterMaxSizeDiff=0.123577;ClusterMaxEditDist=0.218597;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=306;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=2:1194853-1194865;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:31:0|1:22:3:2:25:0|1:39:0:0:15:0/1:31:15:./.:4:28:.:.:.
chr2	1471714	HG2_Ill_breakscan11_3111	A	ACCTCTTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_521:HG4_PB_pbsv_1535:HG3_PB_SVrefine2Falcon1Dovetail_962:HG2_Ill_breakscan11_3111:HG2_PB_pbsv_1531:HG4_PB_SVrefine2PBcRDovetail_838;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_breakscan11_3111;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0732064;ClusterMaxSizeDiff=0.0614934;ClusterMaxEditDist=0.249641;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=330;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:1471715-1471731;PctSeqSimilarity=0.994;PctSizeSimilarity=0.988;PctRecOverlap=0.9881;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2697.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:31:0|1:35:0:0:22:./.:2:5:31:0:0/1:29:7:0/1:12:17:.:.:.
chr2	1833022	HG2_PB_SVrefine2PB10Xhap12_1242	A	AACCTTCCCATACACCTGTGAACTGACCCTCCCATACACCTGTGAACTGACCCTCCCATACACCTGTGAACTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1242:HG2_PB_PB10Xdip_16663:HG2_PB_PB10Xdip_16662:HG2_PB_pbsv_1553:HG4_PB_HySA_2282:HG4_PB_pbsv_1560:HG2_PB_HySA_2864:HG3_PB_pbsv_1551:HG2_PB_SVrefine2PBcRplusDovetail_5435;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1242:HG2_PB_SVrefine2PBcRplusDovetail_5435;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0805369;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.268456;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=72;DistBack=6426;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1396;REFWIDENED=2:1833023-1834373;PctSeqSimilarity=0.9935;PctSizeSimilarity=1;PctRecOverlap=0.9452;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=1;TruScore=97;MatchId=2698.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:72:1/1:2:32:4:29:./.:2:0:4:1:./.:7:0:./.:.:.:.:.:.
chr2	1956460	HG2_PB_SVrefine2Falcon2Bionano_529	T	TCCTTCCTTCCTTTCTTCCTTCCCTTCCCTCCTTCCTTCCCTCCCTCCCTCCCCCTTCCTCCCTCTCTCCCTCCCTCCTTCTCTTCCCTCCCTCCCTCCCCCTTCCTCCCTCTCTCCCTCCCTCCTTCTCTTCCCTCCCTCCCTCCCCCTTCCTCCCTCTCTCCCTCCCTCCTTCTCTTCCCTCCCTCCCTCCCCCTTCCTCCCTCTCTCCCTCCCTCCTTCTCTTCCCTCCCTCCCTCCCCCTTCCTCCCTCTCTCCCTCCCTCCTTCTCTTCCCTCCCTCCCTCCCCCTTCCTCCCTCTCTCCCTCCCTCCTTCTCTTCCCTCCCTCCCTCTTCCTCCCTCTCTCCCTCCCTCCTTCTCTTCCCTCCCTCCCTTTCTTTCCTTCCCTCCTTCCTTTCCTTC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_979:HG3_PB_pbsv_1554:HG2_PB_pbsv_1557:HG4_PB_pbsv_1564:HG2_PB_HySA_2870:HG3_PB_HySA_2303:HG2_PB_PB10Xdip_16672:HG2_Ill_breakscan11_3116:HG2_PB_PB10Xdip_16673:HG2_PB_SVrefine2PB10Xhap12_1245:HG2_PB_SVrefine2Falcon1plusDovetail_5897:HG3_PB_SVrefine2PBcRDovetail_843:HG3_PB_SVrefine2Falcon1Dovetail_971:HG2_PB_SVrefine2PBcRplusDovetail_5437:HG2_PB_SVrefine2Falcon2Bionano_529;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_529:HG2_PB_SVrefine2PBcRplusDovetail_5437;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0727729;ClusterMaxSizeDiff=0.0677541;ClusterMaxEditDist=0.181595;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=402;DistBack=18380;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=297;REFWIDENED=2:1956461-1956757;PctSeqSimilarity=0.9919;PctSizeSimilarity=0.9925;PctRecOverlap=0.9231;SizeDiff=3;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=96;MatchId=2700.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:1:20:0:15:./.:4:24:2:22:./.:0:7:0/1:2:18:.:.:.
chr2	2523870	HG3_Ill_GATKHC_2471	G	GACGAGCAATAGCCCAAAAGAAGGTGCCTCCTCGCAACCCAACACGACTCAGA	20	PASS	ClusterIDs=HG2_Ill_svaba_1825:HG4_Ill_svaba_1847:HG3_PB_pbsv_1559:HG3_Ill_svaba_1871:HG2_PB_pbsv_1562:HG3_Ill_manta_319:HG3_Ill_Spiral_1558:HG3_Ill_Krunchall_2030:HG3_Ill_GATKHC_2471:HG3_Ill_GATKHCSBGrefine_1001:HG3_Ill_250bpfermikitraw_1974:HG3_Ill_150bpfermikitraw_1876:HG2_Ill_svaba_1827:HG2_Ill_manta_414:HG2_Ill_Krunchall_2005:HG2_Ill_GATKHC_2397:HG2_Ill_GATKHCSBGrefine_994:HG2_Ill_250bpfermikitraw_1980:HG2_Ill_150bpfermikitraw_1807:HG2_PB_PB10Xdip_16678:HG2_PB_PB10Xdip_16677:HG2_PB_HySA_2874:HG4_PB_HySA_2293:HG3_PB_HySA_2314:HG4_Ill_svaba_1846:HG4_Ill_manta_363:HG4_Ill_Krunchall_2095:HG4_Ill_GATKHCSBGrefine_1027:HG4_Ill_250bpfermikitraw_1958:HG3_Ill_svaba_1870:HG2_Ill_svaba_1826:HG2_Ill_scalpel_1416:HG2_Ill_Krunchall_2004:HG2_Ill_GATKHC_2396:HG2_Ill_GATKHCSBGrefine_993:HG2_Ill_250bpfermikitraw_1979:HG2_Ill_150bpfermikitraw_1806:HG3_PB_assemblyticsfalcon_13022:HG3_Ill_GATKHC_2470:HG3_Ill_GATKHCSBGrefine_1000:HG3_Ill_Spiral_1557:HG4_PB_assemblyticsfalcon_12797:HG4_PB_SVrefine2PBcRDovetail_848:HG2_10X_SVrefine210Xhap12_1189:HG4_Ill_svaba_1845:HG3_Ill_svaba_1869:HG3_Ill_Krunchall_2029:HG3_Ill_250bpfermikitraw_1973:HG3_Ill_150bpfermikitraw_1875;NumClusterSVs=49;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1807:HG2_Ill_250bpfermikitraw_1980:HG2_Ill_GATKHCSBGrefine_994:HG2_Ill_GATKHC_2397:HG2_Ill_Krunchall_2005:HG2_Ill_manta_414:HG2_Ill_svaba_1827:HG3_Ill_150bpfermikitraw_1876:HG3_Ill_250bpfermikitraw_1974:HG3_Ill_GATKHCSBGrefine_1001:HG3_Ill_GATKHC_2471:HG3_Ill_Krunchall_2030:HG3_Ill_Spiral_1558:HG3_Ill_manta_319:HG3_Ill_svaba_1871:HG4_Ill_svaba_1847;NumExactMatchSVs=16;ClusterMaxShiftDist=0.23301;ClusterMaxSizeDiff=0.213592;ClusterMaxEditDist=0.368932;PBcalls=10;Illcalls=38;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=20;HG3count=19;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=52;DistBack=0;DistForward=8;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=2:2523830-2523881;PctSeqSimilarity=0.9795;PctSizeSimilarity=1;PctRecOverlap=0.6226;SizeDiff=0;StartDistance=20;EndDistance=20;GTMatch=0;TruScore=86;MatchId=2701.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:1/1:0:30:2:31:./.:4:13:1:13:./.:5:58:./.:.:.:.:.:.
chr2	2539934	HG2_Ill_MetaSV_2409	T	TTCAGCGGGTATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1248:HG4_PB_pbsv_1571:HG3_PB_assemblyticsfalcon_13023:HG2_PB_pbsv_1563:HG2_PB_PB10Xdip_16680:HG2_PB_PB10Xdip_16679:HG3_PB_pbsv_1560:HG2_PB_HySA_2875:HG2_Ill_breakscan11_3117:HG2_PB_SVrefine2Falcon1plusDovetail_5900:HG3_PB_SVrefine2Falcon1Dovetail_975:HG4_PB_HySA_2294:HG3_Ill_GATKHCSBGrefine_1002:HG2_Ill_MetaSV_2409:HG2_PB_SVrefine2Falcon2Bionano_532:HG2_PB_SVrefine2PBcRplusDovetail_5440:HG2_PB_SVrefine2PB10Xhap12_1249;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_2409:HG3_Ill_GATKHCSBGrefine_1002;NumExactMatchSVs=2;ClusterMaxShiftDist=0.10628;ClusterMaxSizeDiff=0.099839;ClusterMaxEditDist=0.225352;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:2539935-2539950;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2702.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:54:./.:10:26:12:11:0|1:22:0:0:8:0/1:14:11:0/1:4:27:.:.:.
chr2	2654036	HG2_PB_SVrefine2Falcon2Bionano_535	C	CATCTGATTTGCTCGCTGCTGCGTCCCTGAGATCTGATTTGCTTGCTGCTGCGTCCCTGAGATCTGATTTGCTCGCTGCTGCGTCCCTGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_535:HG2_PB_pbsv_1568:HG4_PB_HySA_2298:HG4_PB_pbsv_1574:HG4_PB_SVrefine2Falcon1Dovetail_985;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_535:HG4_PB_SVrefine2Falcon1Dovetail_985;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0648649;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.329787;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=90;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=361;REFWIDENED=2:2654037-2654397;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:33:./.:4:7:14:19:./.:0:2:1:0:0/1:6:4:./.:.:.:.:.:.
chr2	2754165	HG2_PB_PB10Xdip_17269	G	GTGGTGTGTGTATGGTGTGTGTATATATGTGTGGTGTGTGTGAGGTGATGTGTGTATGGTGTGTGTAGATGTGTATGGTGTGTGTGAGGTGATGTGTGTATGGTGTGTGTAGATATGTGTGGTGTGTGAGGTGGTGCATGTATGGCACGTGTAGATATGTGTGGTGTGTGGGGGGTGGTGTATGTATGGTGTGTGTATATATGTGTGTGGTGTGTGTGAGGTGGTGTGTGTATGCTGTGTGTACATATGTGTGTGGTGTGTGTGGGGTGGTGTATGTATGGTGTGTGTATATATGTGTGTGATGTGTGTGAGGTGGTGTGTGTATGGTGTGTGTATATATGTGTGTGATGTATGTGCAATGGTGTGTGTATGGTGTGTGTAGATATGTGTGCGGTGTGTTTGGGGTGATGTGTGTATGGTGTGTGGGGTGGGGTGTGTATAGCGTGGATATATGTGTGTAGGGGGGATGGGGTGTGTATGGTGTGTGTATATATGTGTGGTGTGGGGGGGGTGGTGGGCTATGTATGGTGTATGTATATATGTGTGGTGTGTATATATGTGTGTGTGGTATGGGAGGGTGGCAGTGTGTATGGTGTGTGTAGATATGTGTGGTATGTGTGAGCTGGTGTATGTATATGTGTGTGTGGTGTGTGTGGGGTGGTGTGTGTATGGCATGTGTTTATATGT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6298:HG3_Ill_SVrefine2DISCOVARDovetail_1051:HG3_PB_SVrefine2Falcon1Dovetail_981:HG3_PB_pbsv_1568:HG4_PB_pbsv_1580:HG4_PB_HySA_2304:HG2_PB_PB10Xdip_17270:HG2_PB_PB10Xdip_17269:HG2_Ill_MetaSV_2412:HG3_Ill_GATKHCSBGrefine_1008:HG4_Ill_manta_365:HG4_PB_HySA_2303:HG2_PB_HySA_2887:HG2_PB_pbsv_1575:HG4_PB_SVrefine2Falcon1Dovetail_988:HG2_PB_SVrefine2Falcon2Bionano_538:HG4_PB_SVrefine2PBcRDovetail_853:HG2_PB_SVrefine2PB10Xhap12_1255:HG2_PB_SVrefine2PBcRplusDovetail_5445:HG3_PB_SVrefine2PBcRDovetail_851:HG2_PB_SVrefine2Falcon1plusDovetail_5903;NumClusterSVs=21;ExactMatchIDs=HG2_PB_PB10Xdip_17269:HG2_PB_PB10Xdip_17270;NumExactMatchSVs=2;ClusterMaxShiftDist=0.309773;ClusterMaxSizeDiff=0.301168;ClusterMaxEditDist=0.387454;PBcalls=16;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=686;DistBack=24;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=461;REFWIDENED=2:2754028-2754488;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9985;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2704.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:2:12:1:21:./.:316:1403:397:1899:./.:0:4:1/1:1:153:.:.:.
chr2	3061618	HG2_PB_SVrefine2Falcon2Bionano_544	G	GTGATAATGATGATGAAGACAAGGATTATGATAATGGTGGTGATGGTGATGGCAAAGATGATGGTGGTGGTGATGGTGATGGCGATGATGATGATGAAGACAAGGATTATGATAATGGTAGTGGTGATGGTGATGATGATGGTGGTGGTGGTGGTGGTGGTGATGATGGTGGTGGTGATGATGATGGTGATGATGATGAAGACAAGGATTA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3121:HG2_PB_pbsv_1585:HG3_PB_pbsv_1577:HG2_PB_HySA_2908:HG3_Ill_SVrefine2DISCOVARDovetail_1058:HG4_PB_SVrefine2PBcRDovetail_861:HG3_PB_SVrefine2PBcRDovetail_856:HG3_PB_SVrefine2Falcon1Dovetail_986:HG2_PB_SVrefine2PBcRplusDovetail_5450:HG2_PB_SVrefine2PB10Xhap12_1261:HG2_PB_SVrefine2Falcon2Bionano_544:HG2_PB_SVrefine2Falcon1plusDovetail_5909:HG2_Ill_SVrefine2DISCOVARplusDovetail_6304:HG2_PB_PB10Xdip_17289:HG2_PB_PB10Xdip_17288:HG4_PB_HySA_2319;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6304:HG2_PB_SVrefine2Falcon1plusDovetail_5909:HG2_PB_SVrefine2Falcon2Bionano_544:HG2_PB_SVrefine2PB10Xhap12_1261:HG2_PB_SVrefine2PBcRplusDovetail_5450:HG3_PB_SVrefine2Falcon1Dovetail_986:HG3_PB_SVrefine2PBcRDovetail_856:HG4_PB_SVrefine2PBcRDovetail_861;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0556845;ClusterMaxSizeDiff=0.0510441;ClusterMaxEditDist=0.133028;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=210;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=173;REFWIDENED=2:3061619-3061791;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2705.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:48:1/1:1:13:1:24:./.:4:121:7:121:1/1:0:12:./.:.:.:.:.:.
chr2	3174811	HG4_Ill_250bpfermikitraw_1975	T	TCTGCCACAGCGCACACACATGGGGATCGCCTGCCACGGTGCACACACGGGAACCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17291:HG2_PB_pbsv_1587:HG3_PB_pbsv_1579:HG4_PB_pbsv_1591:HG4_Ill_Krunchall_2111:HG4_Ill_GATKHC_2419:HG4_Ill_GATKHCSBGrefine_1048:HG4_Ill_250bpfermikitraw_1975:HG4_Ill_150bpfermikitraw_1906:HG3_Ill_scalpel_1528:HG3_Ill_Spiral_1576:HG3_Ill_GATKHC_2497:HG3_Ill_GATKHCSBGrefine_1015:HG3_Ill_250bpfermikitraw_1997:HG3_Ill_150bpfermikitraw_1894:HG2_Ill_manta_418:HG2_Ill_SpiralSDKrefine_8137:HG2_Ill_Krunchall_2022:HG2_Ill_GATKHC_2422:HG2_Ill_GATKHCSBGrefine_1011:HG2_Ill_250bpfermikitraw_1999:HG2_Ill_150bpfermikitraw_1826:HG4_PB_HySA_2323:HG3_PB_HySA_2340:HG2_PB_PB10Xdip_17292;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1826:HG2_Ill_250bpfermikitraw_1999:HG2_Ill_GATKHCSBGrefine_1011:HG2_Ill_GATKHC_2422:HG2_Ill_Krunchall_2022:HG2_Ill_SpiralSDKrefine_8137:HG2_Ill_manta_418:HG3_Ill_150bpfermikitraw_1894:HG3_Ill_250bpfermikitraw_1997:HG3_Ill_GATKHCSBGrefine_1015:HG3_Ill_GATKHC_2497:HG3_Ill_Spiral_1576:HG3_Ill_scalpel_1528:HG4_Ill_150bpfermikitraw_1906:HG4_Ill_250bpfermikitraw_1975:HG4_Ill_GATKHCSBGrefine_1048:HG4_Ill_GATKHC_2419:HG4_Ill_Krunchall_2111;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0877193;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.188034;PBcalls=7;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=227;DistForward=9358;DistMin=227;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=38;REFWIDENED=2:3174810-3174850;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2706.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:41:./.:0:0:5:5:./.:0:0:0:0:1/1:0:8:./.:.:.:.:.:.
chr2	3203466	HG2_Ill_GATKHCSBGrefine_1012	A	ACATCTGGGCAGAGGTGACATGGGTGTGTCTGCATCTGGGCACGCATGGGGAGGGGTGTCCACATCTGGGCAGAGGTGACGGGGTGTGTCTG	20	PASS	ClusterIDs=HG2_PB_HySA_2916:HG4_PB_pbsv_1593:HG3_PB_pbsv_1582:HG2_PB_PB10Xdip_17346:HG2_PB_pbsv_1589:HG2_PB_PB10Xdip_17345:HG4_PB_HySA_2327:HG3_PB_HySA_2343:HG4_Ill_GATKHC_2421:HG4_Ill_GATKHCSBGrefine_1050:HG3_Ill_scalpel_1529:HG3_Ill_GATKHC_2498:HG3_Ill_GATKHCSBGrefine_1017:HG3_Ill_150bpfermikitraw_1897:HG2_Ill_scalpel_1432:HG2_Ill_GATKHC_2424:HG2_Ill_GATKHCSBGrefine_1012:HG2_Ill_150bpfermikitraw_1829;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1829:HG2_Ill_GATKHCSBGrefine_1012:HG2_Ill_GATKHC_2424:HG2_Ill_scalpel_1432:HG3_Ill_150bpfermikitraw_1897:HG3_Ill_GATKHCSBGrefine_1017:HG3_Ill_GATKHC_2498:HG3_Ill_scalpel_1529:HG4_Ill_GATKHCSBGrefine_1050:HG4_Ill_GATKHC_2421;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0752688;ClusterMaxSizeDiff=0.0430108;ClusterMaxEditDist=0.222222;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=91;DistBack=634;DistForward=50;DistMin=50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=413;REFWIDENED=2:3203372-3203784;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:2:61:1:7:./.:0:2:1:8:1/1:0:16:./.:.:.:.:.:.
chr2	3318943	HG2_PB_SVrefine2Falcon2Bionano_550	C	GCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCATCCTCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCATCCTCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCTACCACCACCATCACCACCATCCCCATCCCACCACCCCCCATCCACACCCCCACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCACCCATCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATACACACCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATCCACACCCCCTACCACCACCATCACCACCATCCCCATCCACAGCCCCTACCACCACCATCACCACCATCCCCATCCACAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_550:HG2_PB_SVrefine2Falcon1plusDovetail_5916:HG4_PB_pbsv_1601:HG2_PB_pbsv_1596:HG2_PB_SVrefine2PB10Xhap12_1270:HG2_PB_SVrefine2PBcRplusDovetail_5457:HG4_PB_SVrefine2Falcon1Dovetail_1005:HG3_PB_SVrefine2Falcon1Dovetail_997;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_550;NumExactMatchSVs=1;ClusterMaxShiftDist=0.12921;ClusterMaxSizeDiff=0.127835;ClusterMaxEditDist=0.279038;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=680;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1044;REFWIDENED=2:3318944-3319987;PctSeqSimilarity=0.9694;PctSizeSimilarity=0.9431;PctRecOverlap=0.9445;SizeDiff=-41;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=95;MatchId=2708.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:1:20:0:11:./.:1:8:6:23:./.:1:5:1/1:2:25:.:.:.
chr2	3630306	HG2_Ill_MetaSV_2419	G	GAAAAGAAGAAACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3122:HG3_PB_pbsv_1598:HG4_PB_pbsv_1604:HG2_PB_SVrefine2PBcRplusDovetail_5461:HG2_PB_pbsv_1599:HG4_PB_SVrefine2PBcRDovetail_868:HG2_PB_SVrefine2PB10Xhap12_1275:HG2_PB_PB10Xdip_17383:HG2_PB_PB10Xdip_17384:HG3_PB_assemblyticsfalcon_13077:HG2_PB_SVrefine2PB10Xhap12_1274:HG3_PB_SVrefine2PBcRDovetail_865:HG4_Ill_GATKHCSBGrefine_1054:HG3_Ill_GATKHCSBGrefine_1021:HG2_Ill_MetaSV_2419:HG2_PB_SVrefine2Falcon1plusDovetail_5920:HG4_PB_HySA_2344:HG3_PB_SVrefine2Falcon1Dovetail_1003:HG2_PB_HySA_2942:HG3_PB_HySA_2369;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_MetaSV_2419:HG3_Ill_GATKHCSBGrefine_1021;NumExactMatchSVs=2;ClusterMaxShiftDist=0.170772;ClusterMaxSizeDiff=0.167488;ClusterMaxEditDist=0.229199;PBcalls=16;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=30117;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:3630307-3630321;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2710.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:64:0|1:21:4:5:23:1|0:0:7:17:0:0/1:25:8:0/1:7:19:.:.:.
chr2	3695158	HG3_Ill_GATKHC_2532	T	TTCTCCTGATGCCCCTGGGGGTCGCTCACCCGTCCTCTCCTGATGCCCCTGGGGGTCACTCACCCGTCC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_1841:HG2_PB_pbsv_1604:HG3_PB_assemblyticsfalcon_13081:HG4_PB_pbsv_1609:HG2_PB_HySA_2950:HG3_PB_HySA_2373:HG2_PB_PB10Xdip_17389:HG2_PB_PB10Xdip_17388:HG4_Ill_GATKHC_2437:HG3_Ill_GATKHC_2532:HG2_PB_assemblyticsPBcR_12611:HG2_Ill_GATKHC_2440;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1841:HG4_Ill_GATKHC_2437:HG3_Ill_GATKHC_2532:HG2_PB_assemblyticsPBcR_12611:HG2_Ill_GATKHC_2440;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0583942;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.258993;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=68;DistBack=16;DistForward=21;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=361;REFWIDENED=2:3695066-3695426;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2711.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:85:1/1:0:28:1:38:./.:3:1:4:1:0/1:10:4:./.:.:.:.:.:.
chr2	3931634	HG2_PB_SVrefine2Falcon2Bionano_558	T	TTATATTAGTCCATTTTCTTTTTTTTTTTTTTTTCCCTGTTATAAAGCGATTTTATTAAATTGATTTGGACATACTGTAGGTCAAATAATATTTTCTGAAGATAACAATTATGGACTTTAAAGCTCGACATAAAATTAGTAGCTTCAAAAGGGTTAGTCATATTCCCCAGCAACAGCATGATAAAATAATTCAACTATGTAGAAATATAGAACTCTAGGACTAGTGGAAACTCGGAATCATTTAGCCTAATGTTCTCATTTTGAGAGAAAACTAGACTCAAAGATTAAGCGATTTGCCCAAGCTCACATACCTAATAGTAATAAAGCTAGAAATCAAACCAATTTTTCCTAAAACTAAAATTCTATCAATGATATTTCAACTGGCTATCAACTAAAAGTCTAGGCTTTTCTCTAATGCTCCACGCTATTGTGACATGAAAGAGTGATAAGACACTACAGTAAATCGTACTTGTGGAATTCAGGCCTGGAAGGGGCTTTGGCAAATAACTAAGCCAGCCCTCTCTTTGTAAAAGGAGGAAAAGTATCTGAAGTGACTTACCAAAGGCTGTTAGCAGAGATGTCTGGATTAAAATCCAGATATTGACAAATTCACCCCCAAATCCCATCTCTAGTTTCATGGCCCACCACTAAATCATGTGCTCCTTTTAAATCTCCTTTATGCGCTGAGGTTTTAGTTATACAAAAACCCCTTCCAGTCAAACAGAAAAAATTAATTCAAATATGGAAAGAAAAATCAAACTTTCAGTATTTTTCGTGACTATCTTGAGTAGTTCATTTTCCAACCTCTTAGACAGCTGACAGACACCACTAACCTGATCACCTATTTCAGAGCTTCAAAGATCCTTAATTTCCCCAAAGACTTCCTGAGCAAAAGGACTACATGTGGGAAATCAATGAAAACAGGAATGAGAAGAGAAAGTTAAAAATTGGTTGCTTTTGTTCCTGTCATTGGGGACTTTTGGTCTTCTAAACATTCCTTGAGTTCCTCCACATGAGTTTTTAATATCAATCTAGCAAAATTAAAACAAACAAAAAAAGGCCTCTGAAAGTCAGGATACTGACCACCTCGGCATCTCTCCCTTCCCCACTGCTGCGAATGCCAGTGCTGGCCTGTTCCTTAAACGCACCAGCTCATCCCCAGAGCAGCCTGTGTGCTCTGCCAGCGACTGCTACTTCTCCTCCGGCCTCAGCTCAACATCCCACCGCGGAAAGGCCTCCCTGACCACTAGCTAATGTCACCCCACCCCCACCCACCCCACCACTAAAATCATCACCCTAGTTTATTTTCTTCATAGCACTTAATCACTATCTCAAACTACATTATTTATTTGTTTACTTATCATCTGTTCCTCCACCAGAAGTAAACTCCACAAGAGTAGGGACCTTGTCTGTCTCATCAGTGGTATTCCCAGCACCTAGCACAGTGCCTGGCATATAGGAGGTGTTCAATACATATTTGTTGAATGAAGAAAAGAATGATGGATTAATAAAGACGTTCATGCCTAACAAAGAACTGATACACAGTAATCAATGAAGGGGTATCAAGAACTCCTATGCATTATTGCCCAAGATTACAGAAATAGAGATTGAAACATTAGTGACTCCTCCTACCATCCACTTCTCATAAGGTCTCCCTAGCTAGGAAGGAGCTCCGTCTGTTACCAAAGGAGCCCAGAGGGCAATTCTGGATGAAGAAAAGCTCTCACTTTGCTTGCTTCTTCCTCCCTGCTATTTACATTCAGCTATTTCCAAAAAAATTCAAGTGAAAAATATGTGATGCAGCCACTACAAAATAAGTCTAACAGAGACAGTGATGAGCAGAATCCACACAAATAAAAAAGGTTCAAGGACATATATGTCTGCCAATGACTTTTCTGATAGGCTAAGTGAATGGAATTATGAGTCACCTAAAATCTAAAATGAAAGTTAATGCCATCTAGGAAGGGATGGATATTTATGGGGATTTTGAGGACATATATTCAGAAATAATAGGATATATGGAAAGATATGTAGGGGCTAAATCAAGTGTTAACCTCAGAAATACCAGAACGTGATCTTAGTGGGAGCTGTCTGTTTCCAATGCATTGCCAGTATGCTCGAATAAAGAGGAAGAAGGGCATGAGCTCCTCAAGGGGGAGTATCTGGGATAGCTTTTAAGCAAAGTATAGATAGAAGGTGACTCAGGAGCCGGGCAATGATTGTGGCTTTTTGTGTAGTCTTTCAACTATGGAGGCATCGTGCTGGAATCCCAGGAAGCGACGTCTGTGACTGGGACCTGAGAGCCATCCTGCGTGGATGCTCAGAGGTCCACATTCAAAGTCAACTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACATATGCCTCCTCAGAAACAATGTTCTGCTAGGGATTGCGTAAATATTTCTTGGGTCAATGTAGGTATATACAGGGTTTCCTTCCTAGTGGCACTTATGGGTTTTAAGATTTTAAACTCTTAGCAAAACGTTTTATATAACTGATATTTTGAGATGGTTTCTCTCCTTTGTGTGGACTCTCTGGTGGATGCAGAGGCTCGTACTCTGACTGAAGCCTTTCCGCACTCATCACATTTGAAAGGTTTCTCTCCTGTGTGGACTCTCTGGTGGATGCACAGGCTCGAACTCTGACTGAAGGCCTTCCCACATCCACAACATCTATAGGGTTTCTCTCCAGTGTGGACTCTCTGGTGGATGCAGAGGCTCGAACTCTGACTGAACGCCTTCCCACACTCATAACATTTATAGGGTTTCTCTCCTGTGTGGACTCTTTGATGCATGCAGAGGCTGGAGGTGTGCCTGAAGGCCTTCCCACACTCTTCACATTTAAAGGGCCTCTCTCCGGTGTGGACTCTCTGATGCATGCAAAGGTTTGAACTATTACTAAAGCCCCTTCCACACTCACTACAGACATACGGTTTCTCACCTGTATGAACTCTCATATGAATTTGAAGATGGGAGCTCCAATTGAAGGCTTTGCCACACTCGTAACATTTATAGGGCTTCTCCACTGTGTGGATTTTCTTATGTCTATTAAGTTTTGTTGTAGTGCTAAAATCCTTACCACAATCATCACATTTATAGCCCTTCTCTCCTGTATGGTCTCTCCAATGAATATGAAGTTCTGATATATGAAAGAAACCCTTATCACACTTGTCACATTTATGGGGCTTCTCAGCTGTGTGAATTTTCTGATGCATAAAAAGATCTGCTCTCTCAGAGAAAATTCCCTACACATGGGGCACTTGTAGATCATTTTTCCTATTTGGTATCGTGATTTCAAGGAGAAAATTTCCTTATGATTACTACAGTTACAAGACTGTTATTTCATAGAGTCTCTTATTTGGCCATTTTGGCAGTCTATCTCAGGCTTGCTCTATTAGGTAAGTTTAAGGTCAGCCTAAGCTTTTCCCTGCCTGTCTTTCTACGGAAGGTTTCTTCCTGCATAGTGTTCCTCACTCAGTATTATTATCGATTATAAAGTGACATTGACTTCCACGTGAATTCTGTAACTCATTAACACAGAACTTTGTTTTAGATCCTGAGTTGTCAACATTCCAAGGGGCTCTCAAAGTGCAAACCTTTGCGTTTTTGAGCCCCTGGAATCTTCCTCTTGTAGAGTAATCTTGTACGTCTCACTTCTAGAAAAAGGACTGTACAGTATATCCCCTGTATCGAAGGATGAGATACTGCTGGCTGGTCTCGAGCCCCTGCAGTTGCCCCTTGAAGAGTCAGTTTGGCATTCTGCCTCCTGCACATCAGACAGGAAAGCCTTTCCAGCAAGCAGGCTCCTCAGGGTCCAGGTATGGCAAGCCCTGCTTTGGGGAATTCCCTACATGGGTATCATGCCGTCTCCTTTTTGGTCTTGAAGAAGCTCTCTTATCTTCCAAAGATGTGTCTCTTGGATTTGCAGGTCTGGGTGAGAATCCGGCCCTTGTTGTGGTCAAACAATGGAGGCGTCCGGCGGCAGCAGCCTTCTGCGCTGGGTGCGCGAGGGGTTCCTCATCACCTGAGCGGGATGCTCGCCTCCTCTGCCGGACGCAGGGCGCCCTCCCTCTCCTCAGGGACACCTCACAGGTGCGCCTCCGAGCCGCGCGCGCGCGCGCTCCGCACACCCAGACGCCTCCGGGGGACAGCGCGCGTGCGCACGCACGAGGCCGGGGAAGCCCGGGGGAGCGGGGGCCGCACACATGCGCGGCCACCCGGCCCGCGCCCCCACCGCCCGCCTCCGCCCCCGCCCCCCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1015:HG2_PB_PB10Xdip_17396:HG4_PB_SVrefine2PBcRDovetail_874:HG2_PB_SVrefine2Falcon1plusDovetail_5926:HG2_PB_SVrefine2Falcon2Bionano_558:HG2_10X_SVrefine210Xhap12_1214:HG2_PB_SVrefine2PB10Xhap12_1283:HG2_PB_SVrefine2PBcRplusDovetail_5467;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_558;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00442323;ClusterMaxSizeDiff=0.00442117;ClusterMaxEditDist=0.0100268;PBcalls=7;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=4287;DistBack=69;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:3931635-3931651;PctSeqSimilarity=0.9976;PctSizeSimilarity=0.9956;PctRecOverlap=0.9954;SizeDiff=-19;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2713.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:43:./.:23:13:5:6:0|1:21:0:0:11:0/1:22:15:0/1:151:290:.:4335:.
chr2	4256139	HG2_PB_SVrefine2Falcon2Bionano_560	T	TAAAGAAAAGGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAACCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_2366:HG2_PB_pbsv_1612:HG4_PB_pbsv_1620:HG2_Ill_breakscan11_3123:HG2_10X_SVrefine210Xhap12_1218:HG4_PB_SVrefine2Falcon1Dovetail_1017:HG4_PB_SVrefine2PBcRDovetail_876:HG2_PB_SVrefine2Falcon2Bionano_560:HG2_PB_SVrefine2Falcon1plusDovetail_5927;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_560;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0766962;ClusterMaxSizeDiff=0.0648968;ClusterMaxEditDist=0.130246;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=335;DistBack=26119;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=2:4256140-4256152;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.991;PctRecOverlap=0.994;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2714.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:23:./.:29:6:7:15:0|1:36:0:0:7:0/1:29:9:./.:3:27:.:.:.
chr2	4496970	HG2_PB_PB10Xdip_17460	C	ATGTATATATTCCATATATATGTATTCCATGTATATATTCCATATATATGTATTCT	10	PASS	ClusterIDs=HG3_PB_HySA_2384:HG2_PB_HySA_2960:HG2_PB_PB10Xdip_17460:HG2_PB_PB10Xdip_17459:HG2_PB_pbsv_1615:HG2_PB_HySA_2959;NumClusterSVs=6;ExactMatchIDs=HG2_PB_PB10Xdip_17460;NumExactMatchSVs=1;ClusterMaxShiftDist=0.103448;ClusterMaxSizeDiff=0.103448;ClusterMaxEditDist=0.169492;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=55;DistBack=112;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:4496969-4496971;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9821;PctRecOverlap=0.9649;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2715.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:45:0|1:24:3:4:38:0/0:24:0:18:0:0/1:46:11:./.:.:.:.:817:.
chr2	5628683	HG2_PB_SVrefine2PB10Xhap12_1294	G	GAATGCAAAATAGATACTTTGAGAAAGCTCAGTGAAATCCAAGATAACAGAGAGAAAAAATTCTGAATTATATTAGATAACTTTAACAAAGAGATTGAAATATTTTTTTAAAAATCAAGCGGGAATCCTGGAGCTGAAAAATGCAATTTACATACTGAAGAATGCATCAAAATCTCTTAAAAGTACGACTGGTCACGAAGAAGAAAGAATTGGTGAGCTTGAAGACAAGCTATTTGAAAACACACAACAGTCAGAGTAGACAGACAAAAGAATAAAAATGAATAAAAGAAGCCTACAAGATCTAGAAAGTAGCCTCAAAAGAGCAAATCTAAGAGTTATTGGCCTTAAAGAGGGGGCAGAGAGAGAGATTGGGGTAGAAAGTTTATTAAAGAGAAAATATCAAAGAACTTCTTAAATCTAGAGAAATATATCAATACTCAAGTACAAGAAGGTTATAGAATGAACACCAAGCAGATTTAATCTAAAAAAGACTACCTCTAGATATTTCATTAACAAACTCTCAAAGGTCAAGAATAAAGAAAGGGTTCTAAAAGCAGCAAGAGAAAAGAAACAAATAGCATACAAAGGAGCTCTGGTACATCTGGCAACACACTTCTCAGTGGAAACCTCACAGGGCAGGAGAGAGTGGCATGGTATAATTTAAAGTGCTGAAGGAAAAAAAAAACTTTTATCCTGGAATAGTATACCTATCAAAAATATTCTTCAAACATGAAAAGAAACAAAGATATTCCCAGACAAACAAAAGCTGAGGCATTTTATCAATACCAGGCCTCTCCTACCTACAAGAAATGCTGAAGGGAGTTCTTTATTCTGAAAGAGGAGGATGTTAATGAGCAAGAAGCAATCATCCGAAGGTACAAAACTCACTGGTAATAGTAAGCACACAGGAAAACACAGAATAGTGCAGTAGTGCAACTGTGATTTGTAAGCTACTCTTAAGTAGAAGGACTATATGATGAACCTATCAAAGATACTAACTACAACAACTTTTCAACACATAGTACGATAAGATAGAGAAAAACAAAATGTTAAAAAGCAAGGGGATGAAATTAAAATGTAGAGTTTTCATTAGTTTTCTTTTGCATGTTTGTTCATTTATGCAATCAGTTTTTATATTACACCAGTTTAAAATAATGGGTTATAAGACAGTATTTGCAAGCTTAAATCCAAAAATCATACAATAGATATACAAAAATAAAAAGCATAAACTAAATCAAATGACCAGAGAAAATCACCTTCACTAAAAGGCAGAAAGGAAGAAAGGAAAGAAGGAAGAAAAGGCCACAAAACAACCAGAAAACGAATAGCAAAATGGTAGGAGTAAGTATTTGCAAATTAATAGTAACATTGAATGCAAAAGGAGTAAACTCTCCAGTTAAAAGACATAGAGTGGCTGAATGGATGAGAAAACAAGACCTAATAATCTGTTCTCTGCAAGAAACACATAGACTAAAAATAAAGAGATGGAAAAAGATATTCCATGCCAGTGGAAACCAAAAAATGAGCAGGAGTAGCTATACTTATATCAGCCAAAATGATTTCAAGACAAAAACTGTAAGAAGAGACAAAGAAGGTCACTATATAATGATTAAGGAATTAATTCAGCAAGAAGATACGATGATTGTAAATATATACGCACCAAACACTGGAACACCCAGATATATAAAGTAAATATTATTCAAGTTAAAAGAGAGAGATAGACCCCAATATAATAATAGCTGTAGACTTCAACACCCTACTTTCAGCAATGGACAGATCTTCCAGACACAGAATCAACAAATAAATATTGGATTTAACTGCACCATTGACCAAATGGACCTAGTAGATATTTACAGAACGATTCATCCAACGGCTGCAGAATACAGATTATTCTCCTTAGCACACAGATTATTCTCAAGTATACAGCATATGTTAGGGTACAAAACAAATCCTGAATCAATTTAAAAATATTGAAATCATATAAGTATCTTCTCTGATCACAATGACATAAAATTGGAAATCAATAACAACAGGAATTTTGGAAACTATACAAACACCTGGAAATAAACAAGATGCTCCTGAATGACCAGAGGGTCAAGAAGAAATTAAAAAGAGAATTCAAAAATTTTTTGAAATAAATAAAAGTGTAAACAGAACAAACCAAAAATCTATGGGATACAGTGAAAGTACTAAGAGGTAAGTTTATGGATATAAGCATCTATATCAAAAAAGCAGAAAAACTTCAAATAAATGACCTAACTATGCATCTTAAAGAATTTAAAAAGCAAGAGCAAACCAAACCCAGAATTAGTAGAAGAAAAAAATAATAAAGAGAAGAAATAAATGAAATTGAAACTAAAAATGAAAAAGATGAATGACAAGAAAAACTGTTTTTTTTAAAGATGAACAAAATTGACAGGCCTTTAGCATGACTAAGAAAAAGGAGAAAAGATTCAAAGAAATAAACCCAGACATTACAGTCAACAGCACATAAATTTAAAGGATCATTAGAGGCTACTATGAGCAACTACATGCCAATAAATTGGAAAAACCAAGAAGCTGATAAATTCCTAGACACATACAACCTACCAAGATTGGACCATGAAGAAATCCAAAACTTGAACAGACCAGTAACAAGTAATGAGATTGAAACCATAATAATAATAAAAAATCTTTCAGCAAAGAAAAGCCTAGGACCAAAAGGCTTCACTTCTGAATTTTATAAAGCATTTCAATATGAATTCTTACCAATCATACTCAAGCTATTCCAAAAAAATATAGGAAGAGGGAACACTTCCCTACTCATTCTAGAGGGCTGATATGGTTTGGTTCTGTGTCCCCACCCAAATCTCATCTCAAACTGTAATTCCCATAATCCCCATGTGTCAAGGGAGACACATGGTGGGAGGCGATTGGATCCTGGGGGCAGTTTCCCCCATGCTGTTCTTGTGATAGTGAGTGAGTCCTCATGACAGCTGATGGTTTTATAAGTGTTTGACAGTTCCTCCTTCATACATGCTTCTCTCTCTTGCCTGCTGCCACATAAGACATGCCTGCCTCCTCTTCCACCGTGATTCTAAATTTCCTGAGGCCTCCCCAGCCATGCAGAACTGTGAGTCAATTAAACCTCTTTTCTTTATAAATTAGTCAGTCTCAGGTTTTTCTTATAGTAGTGTGAGAACAGACTAATACAGAGGCCAGTATCATCCCGATACCAAAACCTGACAAAGGCACATCAAAAAAAGAAAACCACATGCCAATATACCTGATGAACATTGATGCAAAAATCCTCAACAAAATACTAGCAAAGTAAATTCAACAACACATGTAAAAGATTATTCATCATGACTAAGTGGAATTTATCCCAGAGATGCAAGAGTGGTTCAACATATGCAAATCAATCAACGTGATACATCATATCAACAGAACAAATTACAAAACCCACATGATTATTTCAAATGATGCTGGAATTTAATAAAATTCAACATATCTTGATGATAAAAACCTTCAAAGAAACTGGGTGTAGAAGATACATACTTCAACATAATAAAAGCCATATATGACAGACCCACAGCTAGTATGTACTGAATACAGAAAAAAAGACAGCCTTTCCTTAAGATATAGAATATGAAAAGGATGCCCACTTTCACCACTGTTATTTAAAATAGCACTGGAAGTCCTAGCTATAACAATCAGACAAGAGAGATAAATAAAGGGCATCCAAATTGGAAAGGAAGAAGTCAAATTATCCTTGTTTGCAGATGATATAATTTTATATTTGGAAAAACCTAAAGACCCTCCCAAAAAGCCAGTAGAACTGATAAACAAATTCAGCAAAGTTGCACAATATAAAATCAACATACAAAAATCAGTAGCATTTCTATATTCTAACAGTGAACAATCTGAAAAAAGAGATCCAGAAAGTAATCTCATTTACAATGGCTACAAATAAAATAAAATACCTAGGAATAAACTTAACCAAAGAAGTGAAAGACCTCTAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1018:HG4_PB_HySA_2388:HG2_PB_pbsv_1627:HG4_PB_HySA_2387:HG2_Ill_breakscan11_3124:HG4_PB_pbsv_1632:HG2_PB_PB10Xdip_17508:HG2_PB_assemblyticsfalcon_13057:HG2_PB_assemblyticsPBcR_12636:HG4_PB_SVrefine2PBcRDovetail_883:HG3_PB_SVrefine2PBcRDovetail_878:HG3_Ill_SVrefine2DISCOVARDovetail_1088:HG2_PB_SVrefine2Falcon1plusDovetail_5936:HG4_Ill_SVrefine2DISCOVARDovetail_1117:HG2_PB_SVrefine2PBcRplusDovetail_5477:HG2_PB_SVrefine2PB10Xhap12_1294:HG2_PB_SVrefine2Falcon2Bionano_565:HG2_10X_SVrefine210Xhap12_1227:HG4_PB_SVrefine2Falcon1Dovetail_1025;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_565:HG2_PB_SVrefine2PB10Xhap12_1294:HG2_PB_SVrefine2PBcRplusDovetail_5477;NumExactMatchSVs=3;ClusterMaxShiftDist=0.062219;ClusterMaxSizeDiff=0.062219;ClusterMaxEditDist=0.183005;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=4000;DistBack=13808;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=2:5628684-5628691;PctSeqSimilarity=0.9989;PctSizeSimilarity=0.9998;PctRecOverlap=0.9988;SizeDiff=-1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=2716.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:122:1/1:0:39:0:21:1/1:0:9:1:11:1/1:1:51:1/1:2:554:.:3690:.
chr2	6368698	HG3_Ill_GATKHC_2566	T	TTCCCCTCCCCTCCCCTCCCCTTTCCTCTCACCTCCCCTCCCCTCCCCTTTCCTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6325:HG2_Ill_breakscan11_3125:HG3_Ill_scalpel_1561:HG3_Ill_GATKHC_2567:HG2_Ill_manta_425:HG2_Ill_GATKHC_2476:HG2_Ill_GATKHCSBGrefine_1027:HG2_PB_pbsv_1631:HG3_PB_HySA_2419:HG2_PB_PB10Xdip_17551:HG2_PB_PB10Xdip_17550:HG4_Ill_scalpel_1394:HG4_Ill_manta_376:HG4_Ill_GATKHC_2475:HG4_Ill_GATKHCSBGrefine_1066:HG4_Ill_150bpfermikitraw_1946:HG3_Ill_scalpel_1560:HG3_Ill_GATKHC_2566:HG2_Ill_GATKHC_2475:HG2_Ill_GATKHCSBGrefine_1026:HG3_PB_pbsv_1628:HG2_PB_HySA_2984:HG4_PB_pbsv_1636:HG2_10X_SVrefine210Xhap12_1234:HG4_PB_SVrefine2PBcRDovetail_885:HG4_PB_SVrefine2Falcon1Dovetail_1028:HG3_PB_SVrefine2PBcRDovetail_880:HG3_PB_SVrefine2Falcon1Dovetail_1020:HG3_Ill_SVrefine2DISCOVARDovetail_1090:HG2_PB_SVrefine2PBcRplusDovetail_5479:HG2_PB_SVrefine2PB10Xhap12_1297;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1026:HG2_Ill_GATKHC_2475:HG3_Ill_GATKHC_2566:HG3_Ill_scalpel_1560:HG4_Ill_150bpfermikitraw_1946:HG4_Ill_GATKHCSBGrefine_1066:HG4_Ill_GATKHC_2475:HG4_Ill_manta_376:HG4_Ill_scalpel_1394;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0900901;ClusterMaxSizeDiff=0.0900901;ClusterMaxEditDist=0.212389;PBcalls=13;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=54;DistBack=3;DistForward=8;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=2:6368681-6368713;PctSeqSimilarity=0.9922;PctSizeSimilarity=1;PctRecOverlap=0.8364;SizeDiff=0;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=94;MatchId=2717.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:64:1/1:3:32:1:26:./.:1:13:1:20:1/1:0:15:./.:.:.:.:.:.
chr2	6636076	HG3_Ill_GATKHCSBGrefine_1040	G	GGCTTCGTTAAACTTCACTCGGAAGTGCTTCGTTAAACTTCACTCGGAAGTGCTTCTTTAAACTTCACTCGGAAGT	20	PASS	ClusterIDs=HG4_PB_HySA_2396:HG3_PB_pbsv_1632:HG4_PB_SVrefine2PBcRDovetail_886:HG2_PB_HySA_2991:HG4_Ill_Krunchall_2155:HG2_PB_pbsv_1636:HG4_Ill_GATKHC_2478:HG4_PB_pbsv_1641:HG4_Ill_GATKHCSBGrefine_1068:HG4_Ill_250bpfermikitraw_2018:HG3_PB_SVrefine2PBcRDovetail_882:HG3_Ill_manta_329:HG3_Ill_SVrefine2DISCOVARDovetail_1093:HG3_Ill_Krunchall_2093:HG3_Ill_GATKHC_2571:HG3_Ill_GATKHCSBGrefine_1040:HG3_Ill_250bpfermikitraw_2045:HG3_Ill_150bpfermikitraw_1944:HG2_Ill_SVrefine2DISCOVARplusDovetail_6329:HG2_Ill_Krunchall_2065:HG2_Ill_GATKHC_2479:HG2_Ill_GATKHCSBGrefine_1028:HG2_Ill_250bpfermikitraw_2044:HG2_PB_SVrefine2Falcon1plusDovetail_5940;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2044:HG2_Ill_GATKHCSBGrefine_1028:HG2_Ill_GATKHC_2479:HG2_Ill_Krunchall_2065:HG2_Ill_SVrefine2DISCOVARplusDovetail_6329:HG3_Ill_150bpfermikitraw_1944:HG3_Ill_250bpfermikitraw_2045:HG3_Ill_GATKHCSBGrefine_1040:HG3_Ill_GATKHC_2571:HG3_Ill_Krunchall_2093:HG3_Ill_SVrefine2DISCOVARDovetail_1093:HG3_Ill_manta_329:HG3_PB_SVrefine2PBcRDovetail_882:HG4_Ill_250bpfermikitraw_2018:HG4_Ill_GATKHCSBGrefine_1068:HG4_Ill_GATKHC_2478:HG4_Ill_Krunchall_2155;NumExactMatchSVs=17;ClusterMaxShiftDist=0.145695;ClusterMaxSizeDiff=0.119205;ClusterMaxEditDist=0.307692;PBcalls=8;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=75;DistBack=13995;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=80;REFWIDENED=2:6636077-6636156;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2718.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:33:./.:9:18:20:8:0|1:10:0:0:12:0/1:12:14:./.:.:.:.:.:.
chr2	6798286	HG3_PB_pbsv_1635	T	TTTTTTTTTTTTTTTTTTTATGTGTAAAAGTTTGGTTGGTCTTTTTTTTTTTTTTCTTTTTTTTCTTTTTATTAATACTTTAGTTTTAGGGTAACATGTGGCACACTGTGCAGGTTAGTTTACATATGTATATACATGTGGCCATGCTGGTCGCTGCACCCACTAACTCGTCATCTACTTAAGGTATATTCCCAATGCTATCCTCCCCGCTACCCCACCCCACCACAGTCCGCAGAGTTTGTGATATTTCCCTTCATGTGTCATGTGGATCTCATGTTCAATTGCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTTGTTCTTGGATAGTTTACTGAGAATGATGAATTTCCCATTTCATTCCATGTCCGCTACAAAGGACATGAACCATCATTTTTTTATGGCTGCATAGTAATTCCATGGTGTATATGTGCCCATTTTCTTAATCCAGTCTATCATTGTTGGGAATTTGGGTGGTTGCCAAGTCTTTGCTATGTGAATAATGCCGGGGCAATAAACATATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTGGGGTATATACCCAGGTAATGGGATGGCTCGGTCCAAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCACCAACAAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTTGTTTCCTGACTTTTAATGATTGCCATTCTACTGGTGTGAGATTGAATCTTCATAAGGGTTTGATTTGGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTCAGAAGTGTCTGGTTCATGTCTTTCGCCCCCACTTTTTGATGGGGTTGTTTGTTTTTTCTTGTAAATTGTTTGAGTCATTGTAGAATTCTGGAGATATTAGCCCTTTGTCAAGATGAGTAGGTTTGCGAAAATTTTTCTCGCCGTTGTAGGGTTGCCTGTTCACCTCTGATGTAGTTTCTTTTGCTGTTGCAGAAGCTCTTTTAGTTTAAAATGATCCCATTTGTCAATTTTGGCTTTTGTTGCAATTGCTTTTGGTGTTTTATAGACATGAAGTCCTTGCCCATAGCCATGTCCCTGAATGGTATGCCTAGGTTTTCTTCTAGGGTTTTATTTGGTTTTAGGTCTAACATTTAAATCTTTTAATGCCATCTTGAATTGAATTTTTGTATAGGGTGTTAAGGAAGGGACCCAGTTTCAGCTTTTCTACATATGGCTAGCCAGTTTTCCAGCACCATTTATTAATAGGGAATCCTTTCCCCATTGCTTTGTTTTTCTCAGGTTTGTCAAAAGATCAGATAGTTTGTAGGTATGCGGGCGTTATTTAGGAGGCTCTGTTCTGTTCCATTGATCTGTATCTCTGTTTTGGTACCGCATGTACGCATGCTGGTTTTTGGTACTGTAGCCTTGTAGTATAGTTTTGAAGTCAGGTAGTGTGATGCTGCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCAGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTCCAATTCTGTGAAAGAAAGTCACTCGGTAAGCTTGATGGGGATGGCATTGGAATCTGGTAAATACCTTGGGCAGTATGGCCATTTTTCACCATATTGATTCTTCCTACCCATGAGCAATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTTAATTTCCTTGAGCAGTGGTTTGTAGTTTCTCCTTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCTAGGTATTTTATCTCTTTGAGCAATTGTGAATGGGAGTTCACTCATGATTTGGGCTCTCTGTTTGTAATGTTGCTGTGTATAAGAAATGGCCTTGTGATTTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTTGCTTATCAGTTAAGGAGACTTTGGGCTGGACCGATGGGGTTTCTAGATAAACAATCATGTCGTCTGCAAACCAGGGACAATTTGACTTCCTCTTTTCCTAAGTTGGAATACCCTTTATTTCCTTCTCCTGGCTGAATTGTCCTGGCCAGAACTTCCAAACACTATGTTGAATAGGAGCGGTGAGAGAAGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAGCTTCCAGTTTTTGCCCATTCAGTAATGATATTTGGCTGTGGGTTTTGTCAGA	10	PASS	ClusterIDs=HG3_PB_HySA_2430:HG2_PB_pbsv_1639:HG3_PB_pbsv_1635:HG2_PB_PB10Xdip_17591:HG2_PB_HySA_2994:HG2_PB_SVrefine2PBcRplusDovetail_5482:HG2_PB_SVrefine2Falcon2Bionano_570:HG3_PB_SVrefine2PBcRDovetail_884:HG2_PB_SVrefine2PB10Xhap12_1303:HG3_PB_SVrefine2Falcon1Dovetail_1024;NumClusterSVs=10;ExactMatchIDs=HG3_PB_pbsv_1635;NumExactMatchSVs=1;ClusterMaxShiftDist=0.037949;ClusterMaxSizeDiff=0.0365936;ClusterMaxEditDist=0.133689;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2253;DistBack=-2;DistForward=31227;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:6798287-6798286;PctSeqSimilarity=0.9623;PctSizeSimilarity=0.9818;PctRecOverlap=0.9822;SizeDiff=41;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=97;MatchId=2719.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:1|0:4:25:32:0:0|1:30:0:1:11:0/1:22:7:0/1:61:40:.:2075:.
chr2	7050596	HG2_10X_SVrefine210Xhap12_1239	A	AAATAATAACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATAAT	20	PASS	ClusterIDs=HG3_PB_HySA_2431:HG2_PB_HySA_2996:HG2_Ill_breakscan11_3126:HG3_Ill_manta_332:HG3_Ill_Spiral_1628:HG3_Ill_MetaSV_2574:HG3_Ill_GATKHCSBGrefine_1044:HG2_PB_SVrefine2Falcon2Bionano_571:HG2_Ill_manta_429:HG2_Ill_MetaSV_2428:HG2_Ill_GATKHCSBGrefine_1032:HG2_10X_SVrefine210Xhap12_1239:HG3_PB_SVrefine2PBcRDovetail_885:HG3_PB_pbsv_1637:HG2_PB_pbsv_1640;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1239:HG2_Ill_GATKHCSBGrefine_1032:HG2_Ill_MetaSV_2428:HG2_Ill_manta_429:HG2_PB_SVrefine2Falcon2Bionano_571:HG3_Ill_GATKHCSBGrefine_1044:HG3_Ill_MetaSV_2574:HG3_Ill_Spiral_1628:HG3_Ill_manta_332;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0765957;ClusterMaxSizeDiff=0.0765957;ClusterMaxEditDist=0.174274;PBcalls=6;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=116;DistBack=87491;DistForward=25168;DistMin=25168;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=2:7050597-7050603;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:./.:24:18:2:8:0|1:17:0:1:14:0/1:25:16:./.:.:.:.:.:.
chr2	7291438	HG2_PB_SVrefine2Falcon1plusDovetail_5943	A	ACTGCTGGCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTTTTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCTGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	10	PASS	ClusterIDs=HG2_PB_HySA_2999:HG4_PB_pbsv_1648:HG4_PB_HySA_2402:HG2_PB_assemblyticsPBcR_12655:HG2_PB_pbsv_1646:HG4_PB_SVrefine2PBcRDovetail_888:HG2_PB_SVrefine2Falcon1plusDovetail_5943:HG2_PB_SVrefine2PBcRplusDovetail_5485:HG2_PB_SVrefine2PB10Xhap12_1307:HG4_PB_SVrefine2Falcon1Dovetail_1032;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5943;NumExactMatchSVs=1;ClusterMaxShiftDist=0.150782;ClusterMaxSizeDiff=0.150782;ClusterMaxEditDist=0.182077;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=356;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=2:7291439-7291451;PctSeqSimilarity=0.9944;PctSizeSimilarity=0.9889;PctRecOverlap=0.9889;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2722.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:52:0|1:28:0:3:40:1|0:0:7:26:0:0/1:22:8:./.:6:46:.:.:.
chr2	7628517	HG4_PB_SVrefine2Falcon1Dovetail_1033	A	AGAGGGAGAGAAAGAAAGAGGAGGAAGGAGGGAGGGAGGAAGAAAAAAGGAAGGAAGGAAGGAAGGAGGGAGGGAAGGAAAGAAGAAGGAAGGGAGGAAGGAGGAGGGAAGGAAAGAGAAAAGGAAGGGAGGAAGGAAGGAGGGAAGGAAGGAGGAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGGAGAAAGGAAGGAGGAAGGAGGGAGGAAGGAAAGAGAAAGGAAGGAGGAAGGAGGGAGGAGAAGGAAGGAGAAAGGAAGGGAGGAAGGAAGGGAGGGAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGGAGGAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAAGAAAGGAAGGGGAAGGAGGGAGGGAAGGGAAGGAGAAAGAAGGGAGGAAGGAGGGGAAGGAAAGGAGGAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGGAGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGAGAAAGGAAGGGAGGAAGGAGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGAGAGGGAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGGGGGAAGGAAGAGAAAGGAAGGGAGGAAGGAGGGAGGAAGGAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGAGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAGGAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGGAGAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGGAGGAAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGAAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGAGGGAGGGAAGGAAAGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAGGAGGAAGGAAGGAGAAAGGAAGGGAGGAAGGAGGGAGGGAAGGAAAGAGAAAGGAAAGGGGAAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_573:HG3_PB_SVrefine2Falcon1Dovetail_1026:HG2_PB_SVrefine2PBcRplusDovetail_5486:HG4_PB_SVrefine2Falcon1Dovetail_1033:HG2_PB_SVrefine2PB10Xhap12_1308:HG2_PB_SVrefine2Falcon1plusDovetail_5944;NumClusterSVs=6;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_1033;NumExactMatchSVs=1;ClusterMaxShiftDist=0.090566;ClusterMaxSizeDiff=0.0876633;ClusterMaxEditDist=0.150943;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1672;DistBack=28418;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=777;REFWIDENED=2:7628518-7629294;PctSeqSimilarity=0.8357;PctSizeSimilarity=0.64;PctRecOverlap=0.5266;SizeDiff=602;StartDistance=-491;EndDistance=-491;GTMatch=1;TruScore=66;MatchId=2723.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:44:./.:4:10:0:8:./.:30:8:32:22:0/0:18:0:0/1:19:55:.:1833:.
chr2	8728280	HG2_Ill_Krunchall_2080	G	GCTCAGGCCCCTGTGCCACCAACCCTGGAGAAACCCACCTGGCCTCCTCTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_578:HG3_Ill_Spiral_1639:HG3_Ill_Krunchall_2113:HG3_Ill_GATKHC_2595:HG3_Ill_250bpfermikitraw_2064:HG2_Ill_Krunchall_2080:HG2_Ill_GATKHC_2503:HG2_Ill_250bpfermikitraw_2060:HG2_PB_HySA_3014:HG4_PB_HySA_2415:HG2_PB_pbsv_1654:HG3_PB_HySA_2448:HG4_Ill_Krunchall_2166:HG4_PB_pbsv_1658:HG4_Ill_GATKHCSBGrefine_1076:HG4_Ill_250bpfermikitraw_2033:HG2_PB_assemblyticsPBcR_12668:HG2_PB_SVrefine2PB10Xhap12_1313;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2060:HG2_Ill_GATKHC_2503:HG2_Ill_Krunchall_2080:HG3_Ill_250bpfermikitraw_2064:HG3_Ill_GATKHC_2595:HG3_Ill_Krunchall_2113:HG3_Ill_Spiral_1639;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.317757;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=82675;DistForward=1305;DistMin=1305;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=103;REFWIDENED=2:8728188-8728290;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2724.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:36:0|1:26:5:1:27:./.:11:0:4:9:0/1:16:20:./.:.:.:.:.:.
chr2	9880190	HG4_Ill_svaba_1927	T	TCATCCACTCATCCATCCACCCACTCATCCACTCATCCATCCACCCACCCATCCATCCATCCTACCATC	20	PASS	ClusterIDs=HG4_Ill_svaba_1927:HG3_PB_pbsv_1656:HG2_PB_pbsv_1662;NumClusterSVs=3;ExactMatchIDs=HG4_Ill_svaba_1927;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0704225;ClusterMaxSizeDiff=0.056338;ClusterMaxEditDist=0.236111;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=13;DistForward=22;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=23;REFWIDENED=2:9880189-9880214;PctSeqSimilarity=0.9928;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2726.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:23:0|1:21:2:2:18:./.:7:2:8:21:./.:2:2:./.:.:.:.:.:.
chr2	9888789	HG3_Ill_SVrefine2DISCOVARDovetail_1107	T	TCACGGGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGAACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGTGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_HySA_2423:HG3_PB_assemblyticsfalcon_13147:HG2_PB_SVrefine2PB10Xhap12_1319:HG4_PB_HySA_2424:HG4_PB_pbsv_1663:HG4_PB_SVrefine2PBcRDovetail_895:HG2_PB_PB10Xdip_18003:HG2_PB_SVrefine2PBcRplusDovetail_5494:HG2_PB_assemblyticsPBcR_12682:HG3_PB_pbsv_1657:HG2_PB_pbsv_1663:HG2_Ill_SVrefine2DISCOVARplusDovetail_6342:HG4_Ill_MetaSV_2511:HG3_Ill_SVrefine2DISCOVARDovetail_1107:HG4_Ill_GATKHCSBGrefine_1079:HG3_PB_HySA_2458:HG2_PB_HySA_3039;NumClusterSVs=17;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_1107:HG4_Ill_MetaSV_2511;NumExactMatchSVs=2;ClusterMaxShiftDist=0.332784;ClusterMaxSizeDiff=0.332784;ClusterMaxEditDist=0.365733;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=328;DistBack=1701;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=2:9888790-9888818;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2727.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:46:0|1:25:1:1:38:0|1:21:0:0:10:0/1:27:8:0/1:7:35:.:.:.
chr2	9917078	HG2_PB_PB10Xdip_18005	A	TGGATGGATGGATGCATGGATGGATGCATGGATGGATGGATGGGTGGATGGATGGGTGGATGGATGGGTGGGTGGATGGATGGGTGGATGGATGGGTGGGTGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGCATGGATGGATGGATGGGTGGATGGATGGGTGGATGGATGGGTGGGTGGATGGATGGGTGGGTGGATGGATGGATGGGTGGATCGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGTGTGAATGGGTGGATGGACGGATGGACGGGGGAACAGGTGAACGGGTGGATGGATGGATGGGTGGATGGGTGGGTGGGTGGATGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGGTGGATGGGTGGATGGACGGATGGACGGGGGAACAGGTGAATGGGTGGATGGGTGGATGGATGGATGGGTGGATGGGTGGGTGGGTGGATGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGACGGATGGATGGGTGGGTGGGTGGATGGGTGGGTGGATGGGTGGATGGGTGGATGGATGGATGGATGGATAGATGGATTGATGGGTGGGTGGGTGGATGGATGGATGGATGGATGGATAGATGGATTGATGGGTGGGTGGGTGGGTGGGTGGATGGATGGATGGATGGACGGACGGATGGACGGGTGGGTGGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_894:HG4_PB_SVrefine2PBcRDovetail_897:HG2_PB_PB10Xdip_18004:HG2_PB_PB10Xdip_18005:HG2_PB_pbsv_1664:HG3_PB_pbsv_1658:HG4_PB_pbsv_1664:HG2_PB_SVrefine2Falcon2Bionano_582:HG2_PB_HySA_3041:HG2_PB_SVrefine2PB10Xhap12_1320:HG2_PB_SVrefine2PBcRplusDovetail_5495:HG4_PB_SVrefine2PBcRDovetail_896:HG2_PB_SVrefine2Falcon1plusDovetail_5953:HG4_PB_SVrefine2Falcon1Dovetail_1044;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_18005;NumExactMatchSVs=1;ClusterMaxShiftDist=0.176966;ClusterMaxSizeDiff=0.176966;ClusterMaxEditDist=0.264045;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=723;DistBack=55;DistForward=1411;DistMin=55;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:9917079-9917077;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9986;PctRecOverlap=0.9931;SizeDiff=-1;StartDistance=-4;EndDistance=-4;GTMatch=1;TruScore=99;MatchId=2728.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:78:1/1:4:21:1:34:./.:16:21:5:10:0/1:3:16:0/1:13:43:2695:.:.
chr2	9953259	HG3_Ill_GATKHCSBGrefine_1049	A	AAGCTGAAGAAGCTGGTTGGGAAGAAAGGGAATGCGATTCTATGAGGCTGGAGCCAAGACG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_896:HG2_PB_HySA_3042:HG3_PB_HySA_2459:HG2_PB_pbsv_1666:HG2_PB_PB10Xdip_18007:HG2_PB_PB10Xdip_18006:HG3_PB_pbsv_1660:HG3_Ill_GATKHC_2611:HG3_Ill_GATKHCSBGrefine_1049:HG3_Ill_250bpfermikitraw_2076:HG2_PB_SVrefine2Falcon2Bionano_584:HG2_PB_SVrefine2Falcon1plusDovetail_5955:HG2_Ill_GATKHC_2515:HG2_Ill_GATKHCSBGrefine_1039:HG2_Ill_250bpfermikitraw_2073:HG2_10X_SVrefine210Xhap12_1253:HG2_PB_SVrefine2PBcRplusDovetail_5497:HG2_PB_SVrefine2PB10Xhap12_1322;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1253:HG2_Ill_250bpfermikitraw_2073:HG2_Ill_GATKHCSBGrefine_1039:HG2_Ill_GATKHC_2515:HG2_PB_SVrefine2Falcon1plusDovetail_5955:HG2_PB_SVrefine2Falcon2Bionano_584:HG3_Ill_250bpfermikitraw_2076:HG3_Ill_GATKHCSBGrefine_1049:HG3_Ill_GATKHC_2611;NumExactMatchSVs=9;ClusterMaxShiftDist=0.116667;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.243902;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=60;DistBack=26054;DistForward=122;DistMin=122;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=123;REFWIDENED=2:9953260-9953382;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:24:1|0:4:16:24:7:./.:3:0:4:7:0/1:19:9:./.:.:.:.:.:.
chr2	10138577	HG2_PB_SVrefine2Falcon2Bionano_586	T	TGTATATACACATATATATACGTATATATACACATATATATACGTATATATACACATATATATACGTATATATACACATATATATACGTATATATACACATATATATACGTATATATACACATATATATACGTATATATACACATATATACGTATATATACACATATATATACGTATATATACACATATATATACGTATATATACACATATATATACGTATATATACACATGTATATATGTGTACATATACATGTACATATGTATACATATACATGTACACACATATATATACATATACATGTACACATATATACATATACATGTACAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6346:HG3_PB_pbsv_1662:HG2_PB_SVrefine2PB10Xhap12_1325:HG2_PB_pbsv_1669:HG4_PB_pbsv_1668:HG2_PB_SVrefine2Falcon1plusDovetail_5957:HG4_Ill_SVrefine2DISCOVARDovetail_1137:HG2_PB_SVrefine2PBcRplusDovetail_5499:HG2_PB_SVrefine2Falcon2Bionano_586:HG2_PB_SVrefine2PB10Xhap12_1324:HG3_PB_SVrefine2Falcon1Dovetail_1035:HG3_Ill_SVrefine2DISCOVARDovetail_1111;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_586:HG2_PB_SVrefine2PBcRplusDovetail_5499:HG4_Ill_SVrefine2DISCOVARDovetail_1137;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0855784;ClusterMaxSizeDiff=0.0855784;ClusterMaxEditDist=0.289431;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=328;DistBack=-433;DistForward=-1;DistMin=-433;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=205;REFWIDENED=2:10138578-10138782;PctSeqSimilarity=0.9652;PctSizeSimilarity=0.9695;PctRecOverlap=0.6596;SizeDiff=10;StartDistance=-107;EndDistance=-107;GTMatch=1;TruScore=86;MatchId=2730.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:84:1/1:2:42:2:14:./.:1:20:1:14:1/1:0:23:1/1:2:83:.:.:.
chr2	10418199	HG4_Ill_GATKHCSBGrefine_1087	A	AAGAGGAGGGTGGAGGAGTGCCCCCTGGACTGGGGCCAGAGGAGGGTGGAGGAGTGCCCCCTGGACTGGGGCCGGAGGAGGGAGGAGGAGTGCCCCCTGGACTGGGGTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_589:HG2_PB_pbsv_1672:HG4_Ill_GATKHC_2521:HG4_Ill_GATKHCSBGrefine_1087:HG2_Ill_GATKHC_2528:HG2_PB_HySA_3053:HG4_Ill_SVrefine2DISCOVARDovetail_1139;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_2528:HG4_Ill_GATKHCSBGrefine_1087:HG4_Ill_GATKHC_2521;NumExactMatchSVs=3;ClusterMaxShiftDist=0.183575;ClusterMaxSizeDiff=0.144928;ClusterMaxEditDist=0.280193;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=108;DistBack=6279;DistForward=106;DistMin=106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=281;REFWIDENED=2:10418165-10418445;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2731.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:33:./.:14:20:24:8:./.:1:4:4:0:0/1:11:6:./.:.:.:.:.:.
chr2	10421207	HG2_Ill_250bpfermikitraw_2079	T	TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG2_PB_pbsv_1673:HG3_Ill_Spiral_1650:HG3_Ill_Krunchall_2126:HG3_Ill_GATKHC_2618:HG3_Ill_GATKHCSBGrefine_1057:HG3_Ill_250bpfermikitraw_2081:HG2_Ill_scalpel_1483:HG2_Ill_Krunchall_2101:HG2_Ill_GATKHC_2530:HG2_Ill_GATKHCSBGrefine_1048:HG2_Ill_250bpfermikitraw_2079;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2079:HG2_Ill_GATKHCSBGrefine_1048:HG2_Ill_GATKHC_2530:HG2_Ill_Krunchall_2101:HG2_Ill_scalpel_1483:HG3_Ill_250bpfermikitraw_2081:HG3_Ill_GATKHCSBGrefine_1057:HG3_Ill_GATKHC_2618:HG3_Ill_Krunchall_2126:HG3_Ill_Spiral_1650;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.19403;PBcalls=1;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=19;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=71;REFWIDENED=2:10421162-10421232;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2732.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:35:0|1:32:3:7:25:./.:11:3:1:10:0/1:23:21:./.:.:.:.:.:.
chr2	10676287	HG2_PB_SVrefine2PB10Xhap12_1329	C	CGGGGGATCCTGTGTATTGGGGTGTTTCGGGGATCCTGTGTATTGGGGTGTTTCGGGGGGTCCTGTGTATTGGGGTGTTTCGGGGGATCCTGTGTATTGGGGTGTTTCGGGGATCCTGTGTATTGGGGCGTTTCGGGGATCCTGTGTATTGGGGCGTTTCGGGGGGTCCTGTGTATTGGGGCGTTTCGGGGATCCTGTGTATTGGGGCGTTTCGGGGATCCTGTGTATTGGGGCGTTTCCGTGGGTCCTGTGTATTGGGGCGTTTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1329:HG2_PB_pbsv_1675:HG3_PB_SVrefine2PBcRDovetail_901:HG4_PB_SVrefine2PBcRDovetail_903:HG4_PB_pbsv_1675:HG3_PB_pbsv_1669:HG2_PB_SVrefine2Falcon1plusDovetail_5964:HG2_PB_SVrefine2Falcon2Bionano_591:HG3_PB_SVrefine2Falcon1Dovetail_1041:HG4_PB_SVrefine2Falcon1Dovetail_1050:HG2_PB_SVrefine2PBcRplusDovetail_5504;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1329:HG4_PB_SVrefine2Falcon1Dovetail_1050:HG2_PB_SVrefine2PBcRplusDovetail_5504;NumExactMatchSVs=3;ClusterMaxShiftDist=0.14786;ClusterMaxSizeDiff=0.14786;ClusterMaxEditDist=0.271318;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=265;DistBack=13752;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6690;REFWIDENED=2:10686181-10676880;PctSeqSimilarity=0.9708;PctSizeSimilarity=0.9962;PctRecOverlap=0.5132;SizeDiff=1;StartDistance=-129;EndDistance=-129;GTMatch=0;TruScore=82;MatchId=2733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:75:./.:1:2:0:46:./.:2:59:0:3:1/1:0:9:./.:.:.:.:.:.
chr2	10694544	HG2_Ill_250bpfermikitraw_2086	C	CTAAGTGAAAAAACCAGACACAAAGGGACAGACTCCTCGACAACACTACAT	20	PASS	ClusterIDs=HG3_PB_HySA_2470:HG2_PB_pbsv_1676:HG4_PB_pbsv_1677:HG2_PB_HySA_3063:HG4_PB_assemblyticsfalcon_12944:HG3_PB_assemblyticsfalcon_13172:HG2_PB_assemblyticsPBcR_12704:HG2_Ill_250bpfermikitraw_2086:HG4_PB_HySA_2446:HG2_PB_HySA_3062;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2086:HG2_PB_assemblyticsPBcR_12704:HG3_PB_assemblyticsfalcon_13172:HG4_PB_assemblyticsfalcon_12944;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0961538;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.174757;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=-1;DistForward=22646;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=454;REFWIDENED=2:10694127-10694580;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2734.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:1/1:./.:7:58:0|1:5:1:2:44:./.:1:4:0:0:./.:2:17:./.:.:.:.:.:.
chr2	10946776	HG2_Ill_GATKHCSBGrefine_1050	A	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAAAGAAAAGAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGACAG	20	PASS	ClusterIDs=HG4_PB_pbsv_1680:HG4_Ill_GATKHCSBGrefine_1090:HG2_Ill_GATKHCSBGrefine_1050:HG3_Ill_MetaSV_2581:HG2_PB_HySA_3068:HG4_Ill_MetaSV_2515:HG2_PB_pbsv_1680;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1050:HG4_Ill_GATKHCSBGrefine_1090;NumExactMatchSVs=2;ClusterMaxShiftDist=0.281967;ClusterMaxSizeDiff=0.281967;ClusterMaxEditDist=0.314754;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=170;DistBack=3;DistForward=1771;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=2:10946745-10946777;PctSeqSimilarity=0.9871;PctSizeSimilarity=0.9827;PctRecOverlap=0.8671;SizeDiff=-3;StartDistance=22;EndDistance=22;GTMatch=0;TruScore=94;MatchId=2735.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:19:28:0|1:16:0:0:27:./.:1:10:25:0:0/1:29:4:./.:.:.:.:.:.
chr2	11353691	HG2_10X_SVrefine210Xhap12_1268	T	TAAAATATTTATTACCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3129:HG4_PB_pbsv_1688:HG3_PB_pbsv_1682:HG2_PB_pbsv_1688:HG3_PB_SVrefine2Falcon1Dovetail_1048:HG3_PB_assemblyticsfalcon_13181:HG4_Ill_MetaSV_2517:HG4_Ill_GATKHCSBGrefine_1095:HG3_Ill_GATKHCSBGrefine_1063:HG2_PB_SVrefine2Falcon2Bionano_599:HG2_Ill_MetaSV_2439:HG2_Ill_GATKHCSBGrefine_1054:HG2_10X_SVrefine210Xhap12_1268:HG4_PB_SVrefine2PBcRDovetail_908:HG2_PB_SVrefine2Falcon1plusDovetail_5973;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1268:HG2_Ill_GATKHCSBGrefine_1054:HG2_Ill_MetaSV_2439:HG2_PB_SVrefine2Falcon2Bionano_599:HG3_Ill_GATKHCSBGrefine_1063:HG4_Ill_GATKHCSBGrefine_1095:HG4_Ill_MetaSV_2517;NumExactMatchSVs=7;ClusterMaxShiftDist=0.213376;ClusterMaxSizeDiff=0.213376;ClusterMaxEditDist=0.245223;PBcalls=8;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=312;DistBack=20;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=2:11353692-11353711;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2737.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:0|1:26:8:0:13:0|1:33:0:0:27:0/1:34:18:0/1:10:32:.:.:.
chr2	11426376	HG3_PB_pbsv_1683	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAATCTTCGCTCGTCGCCGCAGGCTTGGAGTGCAGGCGGGATCTCGGCTCACTGCAGCTCCGCCTCCCGTGGTTCATGCCATTCTCCTGCCTCAAGCCTCCCAAGTTAGGCTGCGAGACTTACAGAGCGCCCGGCCACTAGCGCCCGGCCTAATATTTTTGGTATTTTTAGTAGAGACGGGCGTTTCACCGTTTAGTGGGATGGTCTCAGATCTCCTGACCTCGTGATACCGGCCCGCCTCGGCCTCCCAAGTGCTGGGATTTACAGGCGTGAGCCACCGCAGCCCGCCTAAGCAGATGTTTT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3130:HG3_PB_pbsv_1683:HG4_PB_pbsv_1689:HG2_PB_pbsv_1689:HG3_PB_assemblyticsfalcon_13183:HG2_PB_SVrefine2Falcon2Bionano_600:HG3_PB_SVrefine2PBcRDovetail_909:HG4_PB_SVrefine2Falcon1Dovetail_1057:HG2_PB_SVrefine2Falcon1plusDovetail_5974:HG3_PB_SVrefine2Falcon1Dovetail_1049:HG3_PB_HySA_2484:HG2_PB_HySA_3085;NumClusterSVs=12;ExactMatchIDs=HG3_PB_pbsv_1683;NumExactMatchSVs=1;ClusterMaxShiftDist=0.116208;ClusterMaxSizeDiff=0.116208;ClusterMaxEditDist=0.199081;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=339;DistBack=1;DistForward=2403;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:11426377-11426376;PctSeqSimilarity=0.942;PctSizeSimilarity=0.9853;PctRecOverlap=0.9469;SizeDiff=5;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=95;MatchId=2738.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:36:1|0:2:27:22:2:./.:27:0:0:5:0/1:22:6:0/1:9:15:.:.:.
chr2	12607549	HG2_Ill_GATKHCSBGrefine_1068	T	TCTTCCTTCCTTCCATCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTATCTTCCTTC	20	PASS	ClusterIDs=HG3_PB_pbsv_1697:HG3_PB_SVrefine2PBcRDovetail_916:HG3_Ill_svaba_2019:HG2_PB_HySA_3118:HG3_Ill_svaba_2018:HG2_Ill_svaba_1961:HG2_Ill_GATKHCSBGrefine_1068:HG3_PB_HySA_2505;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1068:HG2_Ill_svaba_1961:HG3_Ill_svaba_2018;NumExactMatchSVs=3;ClusterMaxShiftDist=0.19883;ClusterMaxSizeDiff=0.19883;ClusterMaxEditDist=0.210526;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=96;REFWIDENED=2:12607490-12607585;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:32:./.:17:10:2:15:./.:8:12:3:19:0/1:11:9:./.:.:.:.:.:.
chr2	12804411	HG2_PB_SVrefine2Falcon2Bionano_609	C	CTTCCCAAGACACATTCCTCATGTGCTTTTCTCGTGTCACAACGCTGCCACATTTCTCAAAACTACACTTTGGCCCCTAACAACTCCGACCTCATTAGCTCTAATTTCTTTGTTGTCTAGCCCCCAGGAAACCCTGGAGGGTGTTCATCCTAGATTTACCCACTGAGGAGAGTCAGCAACCATCATCTGGGTGTGGCTGTATTAAATTGGAGTCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1278:HG3_PB_pbsv_1699:HG2_PB_HySA_3121:HG2_PB_pbsv_1708:HG2_PB_SVrefine2PB10Xhap12_1348:HG3_PB_SVrefine2Falcon1Dovetail_1059:HG3_PB_HySA_2507:HG3_PB_SVrefine2PBcRDovetail_917:HG2_PB_SVrefine2Falcon2Bionano_609:HG2_PB_SVrefine2Falcon1plusDovetail_5983;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1278:HG3_PB_SVrefine2PBcRDovetail_917:HG2_PB_SVrefine2Falcon2Bionano_609:HG2_PB_SVrefine2Falcon1plusDovetail_5983;NumExactMatchSVs=4;ClusterMaxShiftDist=0.168269;ClusterMaxSizeDiff=0.163462;ClusterMaxEditDist=0.231884;PBcalls=9;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=214;DistBack=101333;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=216;REFWIDENED=2:12804412-12804627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2740.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:45:0|1:30:0:0:33:./.:2:0:0:25:0/1:6:18:./.:.:.:.:.:.
chr2	14414602	HG2_PB_SVrefine2Falcon2Bionano_610	G	GGAGGAACAACACATTTTAAATAAGAAAGTTACTTGTCAAACTTATACTTACACAAAACATAGTGATCTTTCTAAACTGTGAATCTGATCATATTATCTCCTTGTTTGGAATACTCTATGCTGAAGAAAAAAACTCAAAGTTCTTGTAATGGTATGGAAATTCATGATCTAGTCACTCCAGCACCTAGAACAACCTCATTTATGATGGCTGAGGCTACTTACGGTTTCTTTAAAGGATTAAAAGAATAAATCACTTCAAGTGATCAAAAAATATTCACAATAGTTTCTATTGTGGTTAATTTGCCTTGCTGCTCTTGCCTCCAGCCCCTTGAAGATATTATTTATCCCCTCTGCCTGAAATGCCTTGCACCCACTCCATTCCATTCTACCTGCCTAATTCCTGTTTGTCCTTTAAGTCTTAAATTAGACTACTCCAGGATGCTTACACTGAACTCTGAAGAACGTGATGATTGTTTCTTATGAACTTAGTGGGCTGGCCTAACAAACATCCAAGAAAAGTCTGTTAAATGAAAGTATCATAGATACAGATGTGTTTTGAAAATCTTGTCTCTGCAAATTATTTGAAATGTTATCATGTAAAAGTCTCAAATTTTTGGAGCCTTTATTTCTTTACTATCAAATTAGAATAAATAATATCATTAGATTGAAGGCAAGCTATGAACAGTGTCTTGTATGCTTTCAGTATTCAGTTGACCCTTGAACAATGCAAGTTTAAACTGCAGAGGTCCACTTATATGTGGATTTTTTAAAATAAAACTTACACCAAGGGTGCCTGCCTCTCCTGCCTCTCCTTCCACCTCCTCCTTCTCTTCTGGCTCTGCCACTCCTGAGACAGCAAGACCAACCCCTCCTTTTCCTTCTCCTCAGCCTACTCAGTGTGAAGATAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16550:HG3_PB_pbsv_1705:HG2_PB_pbsv_1713:HG4_PB_pbsv_1707:HG4_PB_assemblyticsfalcon_12986:HG3_PB_assemblyticsfalcon_13211:HG4_PB_HySA_2483:HG3_PB_SVrefine2Falcon1Dovetail_1061:HG4_Ill_MetaSV_2523:HG4_Ill_GATKHCSBGrefine_1113:HG3_PB_SVrefine2PBcRDovetail_919:HG3_Ill_SVrefine2DISCOVARDovetail_1130:HG3_Ill_MetaSV_2585:HG3_Ill_GATKHCSBGrefine_1083:HG2_PB_SVrefine2Falcon2Bionano_610:HG2_Ill_MetaSV_2445:HG2_Ill_GATKHCSBGrefine_1072:HG2_10X_SVrefine210Xhap12_1281:HG2_PB_SVrefine2Falcon1plusDovetail_5985:HG2_PB_SVrefine2PB10Xhap12_1351:HG4_PB_SVrefine2PBcRDovetail_919:HG2_Ill_breakscan11_3132;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1281:HG2_Ill_GATKHCSBGrefine_1072:HG2_Ill_MetaSV_2445:HG2_PB_SVrefine2Falcon2Bionano_610:HG3_Ill_GATKHCSBGrefine_1083:HG3_Ill_MetaSV_2585;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0692266;ClusterMaxSizeDiff=0.0681449;ClusterMaxEditDist=0.183467;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=907;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=2:14414603-14414607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:64:0|1:34:5:0:46:0|1:33:0:0:11:./.:27:2:0/1:36:57:.:.:.
chr2	15519539	HG2_Ill_MetaSV_2449	T	TAAGAAGCTGATGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGGGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16603:HG3_PB_pbsv_1710:HG2_PB_pbsv_1719:HG4_PB_pbsv_1712:HG2_PB_HySA_3144:HG3_PB_assemblyticsfalcon_13217:HG4_PB_assemblyticsfalcon_12991:HG2_PB_assemblyticsPBcR_12748:HG3_PB_SVrefine2Falcon1Dovetail_1063:HG4_PB_SVrefine2Falcon1Dovetail_1073:HG4_PB_SVrefine2PBcRDovetail_922:HG4_Ill_manta_392:HG4_Ill_MetaSV_2525:HG4_Ill_GATKHCSBGrefine_1120:HG2_PB_SVrefine2PBcRplusDovetail_5524:HG2_PB_SVrefine2PB10Xhap12_1354:HG2_PB_SVrefine2Falcon2Bionano_614:HG2_Ill_MetaSV_2449:HG2_Ill_GATKHCSBGrefine_1081:HG2_10X_SVrefine210Xhap12_1286:HG3_Ill_MetaSV_2588:HG3_Ill_GATKHCSBGrefine_1087:HG2_PB_SVrefine2Falcon1plusDovetail_5988:HG4_PB_HySA_2491:HG2_Ill_breakscan11_3133:HG2_PB_PB10Xdip_16604;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1286:HG2_Ill_GATKHCSBGrefine_1081:HG2_Ill_MetaSV_2449:HG2_PB_SVrefine2Falcon2Bionano_614:HG2_PB_SVrefine2PB10Xhap12_1354:HG2_PB_SVrefine2PBcRplusDovetail_5524:HG4_Ill_GATKHCSBGrefine_1120:HG4_Ill_MetaSV_2525:HG4_Ill_manta_392:HG4_PB_SVrefine2PBcRDovetail_922;NumExactMatchSVs=10;ClusterMaxShiftDist=0.134185;ClusterMaxSizeDiff=0.134185;ClusterMaxEditDist=0.2048;PBcalls=17;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=312;DistBack=2977;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:15519540-15519553;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2742.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:6:78:./.:4:0:0:36:./.:0:6:0:0:1/1:0:22:1/1:1:60:.:.:.
chr2	16253875	HG2_Ill_SVrefine2DISCOVARplusDovetail_6368	A	AGTGTGTGTGTGTGTTTGTGTGTCTCTATGTGTCTTATGTGAGTGTCTGTATGTCTATGTGTGTCTGTGTCTATGTGTGTCCCTGTCTGTATCTGTGTGTGTATGTGTGTCTGTGTGTCTATGAGT	20	PASS	ClusterIDs=HG2_PB_pbsv_1725:HG4_PB_assemblyticsfalcon_12997:HG4_PB_assemblyticsfalcon_12998:HG4_PB_SVrefine2Falcon1Dovetail_1078:HG3_PB_pbsv_1716:HG3_PB_assemblyticsfalcon_13223:HG3_PB_SVrefine2Falcon1Dovetail_1067:HG2_PB_HySA_3152:HG4_PB_SVrefine2PBcRDovetail_926:HG4_PB_pbsv_1718:HG4_PB_SVrefine2Falcon1Dovetail_1077:HG4_Ill_SVrefine2DISCOVARDovetail_1161:HG4_Ill_150bpfermikitraw_2041:HG3_Ill_SVrefine2DISCOVARDovetail_1136:HG3_Ill_GATKHC_2691:HG3_Ill_GATKHCSBGrefine_1090:HG2_PB_SVrefine2PBcRplusDovetail_5528:HG2_PB_SVrefine2PB10Xhap12_1360:HG2_PB_SVrefine2Falcon2Bionano_618:HG2_PB_SVrefine2Falcon1plusDovetail_5992:HG2_Ill_SVrefine2DISCOVARplusDovetail_6368:HG2_Ill_GATKHC_2606:HG2_Ill_GATKHCSBGrefine_1084:HG2_Ill_250bpfermikitraw_2139:HG2_Ill_150bpfermikitraw_1949:HG2_PB_PB10Xdip_16634:HG2_PB_PB10Xdip_16633:HG4_PB_HySA_2495:HG3_PB_HySA_2535:HG4_Ill_GATKHC_2593:HG4_Ill_GATKHCSBGrefine_1124;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1949:HG2_Ill_250bpfermikitraw_2139:HG2_Ill_GATKHCSBGrefine_1084:HG2_Ill_GATKHC_2606:HG2_Ill_SVrefine2DISCOVARplusDovetail_6368:HG2_PB_SVrefine2Falcon1plusDovetail_5992:HG2_PB_SVrefine2Falcon2Bionano_618:HG2_PB_SVrefine2PB10Xhap12_1360:HG2_PB_SVrefine2PBcRplusDovetail_5528:HG3_Ill_GATKHCSBGrefine_1090:HG3_Ill_GATKHC_2691:HG3_Ill_SVrefine2DISCOVARDovetail_1136:HG4_Ill_150bpfermikitraw_2041:HG4_Ill_SVrefine2DISCOVARDovetail_1161:HG4_PB_SVrefine2Falcon1Dovetail_1077:HG4_PB_SVrefine2PBcRDovetail_926;NumExactMatchSVs=16;ClusterMaxShiftDist=0.124514;ClusterMaxSizeDiff=0.101167;ClusterMaxEditDist=0.360902;PBcalls=19;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=125;DistBack=2441;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=49;REFWIDENED=2:16253874-16253925;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2743.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:41:1/1:2:18:3:10:./.:94:593:63:421:0/1:4:17:./.:.:.:.:.:.
chr2	16406392	HG2_Ill_MetaSV_2453	T	TAGGGAACTGCTGGAAGCCACGGAGATCAGCAGGGACCGCACCATCCCCAGAAGTGTGGATCCACCCGAGGGTCACGTGGATCCTCAAGGAGTGGAGAGTAGACCCTGAGCCACGTGGGCTTCTAGCAGTTCCCTGGGCCTGCTGGCACCAAGATGGGCTCCCTGTCACAGGCCTGACGGGACCTCTGTGAGGGTCCCAGGAGATGAAGCACATGAAGAGGGTTGGTGCACCAAGCAGGCTCACCAAATATTCACTCCCTGACCCCTTTCCCCACGCAAGCTGTGGTGGGGAAGGAGTGTTTCATGGTGGGCAGCCCAGGTGCCAGTCCCCCCCTTCCCCAGTGATGGGGTACCATTACCCCCACGACAGCCCAGCTTGGTGCCAGCAGGCCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16641:HG2_PB_pbsv_1729:HG4_Ill_MetaSV_2530:HG3_PB_pbsv_1718:HG2_Ill_breakscan11_3134:HG4_PB_pbsv_1722:HG4_PB_assemblyticsfalcon_12999:HG3_PB_assemblyticsfalcon_13224:HG2_PB_assemblyticsPBcR_12758:HG2_PB_SVrefine2Falcon1plusDovetail_5994:HG4_PB_SVrefine2PBcRDovetail_928:HG4_PB_SVrefine2Falcon1Dovetail_1080:HG4_Ill_SVrefine2DISCOVARDovetail_1163:HG4_Ill_GATKHCSBGrefine_1125:HG3_PB_SVrefine2PBcRDovetail_926:HG3_PB_SVrefine2Falcon1Dovetail_1068:HG3_Ill_SVrefine2DISCOVARDovetail_1138:HG3_Ill_MetaSV_2591:HG3_Ill_GATKHCSBGrefine_1091:HG2_PB_SVrefine2PBcRplusDovetail_5530:HG2_PB_SVrefine2PB10Xhap12_1362:HG2_PB_SVrefine2Falcon2Bionano_620:HG2_Ill_SVrefine2DISCOVARplusDovetail_6370:HG2_Ill_MetaSV_2453:HG2_Ill_GATKHCSBGrefine_1086:HG2_10X_SVrefine210Xhap12_1289:HG2_PB_PB10Xdip_16642;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1289:HG2_Ill_GATKHCSBGrefine_1086:HG2_Ill_MetaSV_2453:HG2_Ill_SVrefine2DISCOVARplusDovetail_6370:HG2_PB_SVrefine2Falcon2Bionano_620:HG2_PB_SVrefine2PB10Xhap12_1362:HG2_PB_SVrefine2PBcRplusDovetail_5530:HG3_Ill_GATKHCSBGrefine_1091:HG3_Ill_MetaSV_2591:HG3_Ill_SVrefine2DISCOVARDovetail_1138:HG3_PB_SVrefine2Falcon1Dovetail_1068:HG3_PB_SVrefine2PBcRDovetail_926:HG4_Ill_GATKHCSBGrefine_1125:HG4_Ill_SVrefine2DISCOVARDovetail_1163:HG4_PB_SVrefine2Falcon1Dovetail_1080:HG4_PB_SVrefine2PBcRDovetail_928;NumExactMatchSVs=16;ClusterMaxShiftDist=0.127714;ClusterMaxSizeDiff=0.127551;ClusterMaxEditDist=0.217822;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=392;DistBack=18362;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=2:16406393-16406410;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:96:1/1:0:27:0:15:1/1:0:40:0:26:1/1:0:20:1/1:3:63:.:.:.
chr2	18285714	HG2_PB_SVrefine2PBcRplusDovetail_5534	G	GAAGCTGGCTGGCAGATGCCCGTTCTATCTTGTCCTACCACATCTCTGGGACAGTTTCAGGCTCCTGTGCAGAATGACATTGCTTTCAGCCCCGAAGGCCACCAGACGCAACCTTCTC	20	PASS	ClusterIDs=HG2_Ill_Cortex_4154:HG2_PB_pbsv_1735:HG2_PB_PB10Xdip_16739:HG4_PB_assemblyticsfalcon_13012:HG3_PB_pbsv_1723:HG4_PB_SVrefine2PBcRDovetail_932:HG4_Ill_svaba_2009:HG4_Ill_manta_396:HG4_Ill_SVrefine2DISCOVARDovetail_1168:HG4_Ill_MetaSV_2531:HG4_Ill_GATKHCSBGrefine_1127:HG4_Ill_250bpfermikitraw_2129:HG4_Ill_150bpfermikitraw_2053:HG3_Ill_svaba_2061:HG3_Ill_manta_347:HG3_Ill_Spiral_1714:HG3_Ill_SVrefine2DISCOVARDovetail_1144:HG3_Ill_MetaSV_2592:HG3_Ill_GATKHCSBGrefine_1094:HG2_PB_SVrefine2PBcRplusDovetail_5534:HG2_PB_SVrefine2PB10Xhap12_1366:HG2_PB_SVrefine2Falcon2Bionano_625:HG2_PB_SVrefine2Falcon1plusDovetail_5999:HG2_Ill_svaba_1995:HG2_Ill_manta_461:HG2_Ill_SpiralSDKrefine_8247:HG2_Ill_SVrefine2DISCOVARplusDovetail_6379:HG2_Ill_MetaSV_2454:HG2_Ill_GATKHCSBGrefine_1089:HG2_Ill_250bpfermikitraw_2152:HG2_Ill_150bpfermikitraw_1962:HG2_10X_SVrefine210Xhap12_1294:HG3_PB_SVrefine2Falcon1Dovetail_1073:HG4_PB_SVrefine2Falcon1Dovetail_1084:HG3_PB_assemblyticsfalcon_13234:HG4_PB_HySA_2514:HG2_PB_HySA_3170:HG4_PB_pbsv_1726:HG4_Ill_Cortex_1742:HG3_Ill_Cortex_1793;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1294:HG2_Ill_150bpfermikitraw_1962:HG2_Ill_250bpfermikitraw_2152:HG2_Ill_GATKHCSBGrefine_1089:HG2_Ill_MetaSV_2454:HG2_Ill_SVrefine2DISCOVARplusDovetail_6379:HG2_Ill_SpiralSDKrefine_8247:HG2_Ill_manta_461:HG2_Ill_svaba_1995:HG2_PB_SVrefine2Falcon1plusDovetail_5999:HG2_PB_SVrefine2Falcon2Bionano_625:HG2_PB_SVrefine2PB10Xhap12_1366:HG2_PB_SVrefine2PBcRplusDovetail_5534:HG3_Ill_GATKHCSBGrefine_1094:HG3_Ill_MetaSV_2592:HG3_Ill_SVrefine2DISCOVARDovetail_1144:HG3_Ill_Spiral_1714:HG3_Ill_manta_347:HG3_Ill_svaba_2061:HG4_Ill_150bpfermikitraw_2053:HG4_Ill_250bpfermikitraw_2129:HG4_Ill_GATKHCSBGrefine_1127:HG4_Ill_MetaSV_2531:HG4_Ill_SVrefine2DISCOVARDovetail_1168:HG4_Ill_manta_396:HG4_Ill_svaba_2009:HG4_PB_SVrefine2PBcRDovetail_932;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0916667;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.253061;PBcalls=15;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=117;DistBack=7158;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:18285715-18285716;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:2:10:1:12:1/1:0:25:1:20:1/1:0:23:./.:.:.:.:.:.
chr2	18534684	HG2_Ill_150bpfermikitraw_1966	A	ATGTATATATATATACATACATATATATGTATGTATATATACATACATATATATGTATATATATATACATACATACATATATGTATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5536:HG2_PB_PB10Xdip_16750:HG2_PB_HySA_3176:HG2_Ill_breakscan11_3136:HG3_Ill_svaba_2066:HG3_Ill_Spiral_1720:HG3_Ill_Krunchall_2201:HG3_Ill_GATKHC_2713:HG3_Ill_GATKHCSBGrefine_1098:HG3_Ill_250bpfermikitraw_2151:HG3_Ill_150bpfermikitraw_2050:HG2_Ill_svaba_1999:HG2_Ill_SpiralSDKrefine_8252:HG2_Ill_Krunchall_2178:HG2_Ill_GATKHC_2624:HG2_Ill_GATKHCSBGrefine_1092:HG2_Ill_250bpfermikitraw_2156:HG2_Ill_150bpfermikitraw_1966:HG2_PB_pbsv_1740:HG3_PB_pbsv_1728:HG2_PB_SVrefine2PB10Xhap12_1369;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1966:HG2_Ill_250bpfermikitraw_2156:HG2_Ill_GATKHCSBGrefine_1092:HG2_Ill_GATKHC_2624:HG2_Ill_Krunchall_2178:HG2_Ill_SpiralSDKrefine_8252:HG2_Ill_svaba_1999:HG3_Ill_150bpfermikitraw_2050:HG3_Ill_250bpfermikitraw_2151:HG3_Ill_GATKHCSBGrefine_1098:HG3_Ill_GATKHC_2713:HG3_Ill_Krunchall_2201:HG3_Ill_Spiral_1720:HG3_Ill_svaba_2066;NumExactMatchSVs=14;ClusterMaxShiftDist=0.195122;ClusterMaxSizeDiff=0.184049;ClusterMaxEditDist=0.280488;PBcalls=6;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=10;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=2:18534683-18534686;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2746.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:40:0|1:16:1:4:37:1|0:0:16:19:1:0/1:13:23:./.:.:.:.:.:.
chr2	18592343	HG4_PB_pbsv_1732	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTGAAGACGGAGTCCTCGTTCTGTCGCCCCAGGCGGAGTGGCTGTGGCGCGATCCTCCGCTCATGGCAAGCTCCGCCTTCTGGTTCACCCATTCTCCTGCTCAGCCTCCCGAGTAGTCTTGGGACTTACAGGCGCCCGCCACTGGCGCCCCGGCTAATTTTTTTGTATTTTTTAGTAGAGACGGGGTTTCCACCGTGGTCTCGATTCCTCCCTGACCTCGTGGATCCGCCTCGCCTGGCTCGACCAAAAGTGCTGGATTACAGGCGTGAGCGCAGCGCGCCTGACCGGCTTCCGTGATTTGGAG	20	PASS	ClusterIDs=HG2_PB_HySA_3177:HG4_PB_pbsv_1732:HG4_PB_assemblyticsfalcon_13018:HG2_PB_pbsv_1741:HG2_Ill_breakscan11_3137:HG2_Ill_MetaSV_2455:HG2_PB_SVrefine2Falcon1plusDovetail_6001:HG4_PB_HySA_2522;NumClusterSVs=8;ExactMatchIDs=HG4_PB_pbsv_1732;NumExactMatchSVs=1;ClusterMaxShiftDist=0.124814;ClusterMaxSizeDiff=0.124814;ClusterMaxEditDist=0.200581;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=352;DistBack=4;DistForward=20728;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:18592344-18592343;PctSeqSimilarity=0.9403;PctSizeSimilarity=0.9347;PctRecOverlap=0.932;SizeDiff=23;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=93;MatchId=2747.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:59:35:0|1:38:5:3:19:./.:20:1:1:1:0/1:37:5:0/1:18:16:.:.:.
chr2	19803335	HG3_PB_SVrefine2PBcRDovetail_934	G	GAAGGAAGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAGGGAAGGAAGGAGGGAGGGAGGGAGGA	20	PASS	ClusterIDs=HG4_PB_HySA_2535:HG4_PB_SVrefine2PBcRDovetail_939:HG2_PB_SVrefine2Falcon1plusDovetail_6005:HG3_PB_assemblyticsfalcon_13249:HG3_PB_SVrefine2Falcon1Dovetail_1082:HG4_PB_pbsv_1741:HG3_PB_SVrefine2PBcRDovetail_934:HG2_10X_SVrefine210Xhap12_1299:HG2_PB_SVrefine2PBcRplusDovetail_5540:HG2_PB_SVrefine2PB10Xhap12_1372:HG2_PB_SVrefine2Falcon2Bionano_631:HG2_Ill_GATKHC_2640:HG2_PB_PB10Xdip_16794:HG2_PB_PB10Xdip_16793:HG4_PB_HySA_2536:HG2_PB_pbsv_1746:HG3_PB_pbsv_1733;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHC_2640:HG2_PB_SVrefine2Falcon2Bionano_631:HG2_PB_SVrefine2PB10Xhap12_1372:HG2_PB_SVrefine2PBcRplusDovetail_5540:HG3_PB_SVrefine2PBcRDovetail_934:HG4_PB_SVrefine2PBcRDovetail_939;NumExactMatchSVs=6;ClusterMaxShiftDist=0.186916;ClusterMaxSizeDiff=0.186916;ClusterMaxEditDist=0.320755;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=104;DistBack=3668;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=192;REFWIDENED=2:19803226-19803417;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2748.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:1/1:3:45:0:9:./.:3:15:4:20:1/1:1:9:./.:.:.:.:.:.
chr2	21381165	HG2_Ill_GATKHCSBGrefine_1102	T	TAAAAATTACATGTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCATTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_1102:HG4_PB_pbsv_1748:HG2_PB_pbsv_1750:HG4_PB_HySA_2548:HG2_PB_PB10Xdip_16849:HG2_PB_assemblyticsPBcR_12795:HG2_PB_SVrefine2PBcRplusDovetail_5544:HG2_PB_SVrefine2PB10Xhap12_1376:HG2_PB_HySA_3198:HG2_PB_SVrefine2Falcon2Bionano_636:HG4_Ill_MetaSV_2538:HG4_Ill_GATKHCSBGrefine_1144:HG2_Ill_MetaSV_2460;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1102:HG4_Ill_MetaSV_2538:HG4_Ill_GATKHCSBGrefine_1144:HG2_Ill_MetaSV_2460;NumExactMatchSVs=4;ClusterMaxShiftDist=0.200972;ClusterMaxSizeDiff=0.200972;ClusterMaxEditDist=0.230519;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=33389;DistForward=61;DistMin=61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:21381166-21381180;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2749.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:39:0|1:22:6:6:20:1|0:0:14:29:0:0/1:28:12:0/1:6:52:.:.:.
chr2	21413545	HG3_PB_SVrefine2Falcon1Dovetail_1087	C	CAAAAAACCATCTCCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_pbsv_1739:HG2_PB_pbsv_1751:HG3_PB_SVrefine2Falcon1Dovetail_1087:HG2_PB_SVrefine2Falcon1plusDovetail_6010;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1087;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0957747;ClusterMaxSizeDiff=0.0901408;ClusterMaxEditDist=0.195531;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=339;DistBack=5555;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:21413546-21413562;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9941;PctRecOverlap=0.9941;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2750.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:20:./.:6:17:28:2:0|1:15:0:0:5:0/1:29:8:0/1:6:31:.:.:.
chr2	21796810	HG2_Ill_MetaSV_2461	T	TAAAAGAATAGCATTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGGAGCTTGCAGTGAGCGGAGATCGCGCCACAGCACTCCCGCCTGGGCGACAGAACGAGACTCCGTCTCAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16867:HG4_PB_pbsv_1751:HG3_PB_pbsv_1742:HG2_PB_HySA_3203:HG2_PB_pbsv_1752:HG2_PB_HySA_3202:HG2_PB_assemblyticsPBcR_12798:HG4_PB_HySA_2556:HG4_PB_SVrefine2PBcRDovetail_945:HG4_PB_SVrefine2Falcon1Dovetail_1098:HG4_Ill_MetaSV_2540:HG4_Ill_GATKHCSBGrefine_1146:HG3_PB_SVrefine2PBcRDovetail_938:HG3_PB_SVrefine2Falcon1Dovetail_1089:HG3_Ill_MetaSV_2598:HG3_Ill_GATKHCSBGrefine_1109:HG2_PB_SVrefine2PBcRplusDovetail_5545:HG2_PB_SVrefine2PB10Xhap12_1378:HG2_PB_SVrefine2Falcon2Bionano_638:HG2_PB_SVrefine2Falcon1plusDovetail_6011:HG2_Ill_manta_468:HG2_Ill_MetaSV_2461:HG2_Ill_GATKHCSBGrefine_1103:HG2_10X_SVrefine210Xhap12_1312:HG2_PB_HySA_3201:HG3_PB_HySA_2592;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1103:HG2_Ill_MetaSV_2461:HG2_Ill_manta_468:HG2_PB_SVrefine2Falcon1plusDovetail_6011:HG2_PB_SVrefine2Falcon2Bionano_638:HG2_PB_SVrefine2PB10Xhap12_1378:HG2_PB_SVrefine2PBcRplusDovetail_5545:HG3_Ill_GATKHCSBGrefine_1109:HG3_Ill_MetaSV_2598:HG3_PB_SVrefine2Falcon1Dovetail_1089:HG3_PB_SVrefine2PBcRDovetail_938:HG4_Ill_GATKHCSBGrefine_1146:HG4_Ill_MetaSV_2540:HG4_PB_SVrefine2Falcon1Dovetail_1098:HG4_PB_SVrefine2PBcRDovetail_945;NumExactMatchSVs=15;ClusterMaxShiftDist=0.154882;ClusterMaxSizeDiff=0.154882;ClusterMaxEditDist=0.26045;PBcalls=18;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=297;DistBack=3837;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:21796811-21796827;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2751.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:93:1/1:0:8:0:6:1/1:0:6:0:9:1/1:0:22:./.:.:.:.:.:.
chr2	22046509	HG3_Ill_SVrefine2DISCOVARDovetail_1160	G	GACATCACTGGGCAGCATTAGAGCATGGGGACTCTCAGGTGGACAGGTTCTGTGGTCCTCAAGATGTTCTGGGCCTCTGAAGGCCTGCCCAGGCCTGGGCCTCTTGGAGAATCACTGGGGGACTAGATGGGGCCTGTCCTAACCCCTCTTCTGCAGGAAGTGGGACTAGTGTCTTTTCGCTTTCTCTCTCTCTCATTTGCTAAATTTAAATTAAAGCACACACTGAATGCCAGCCCAGATCATCCACCACCTATTTTGAGAACTGTGTACTTACTGTGTTTCTGCTGGTGGGTACGTGTCTTTCATCTGGGATTGTGCCCTCGTTAGATACTAGTGCTACTGCCAAGAGACCTGAATGGCTTTTGGATATTGCATTCCCACTTGCAGTAAACAAGTGGGTACATCTTTCCCAATATGTGATATTGATTTTTTTTGCCTTATAGATATAAAATTGTGTTTTATTATTTTCATGTCCATTTCTTTGTATACTGGTGAGTTTGACAGTTTCTTCTTATACTTATTAGTCATTTTGTCCTCTTCATCTATTACCTGTGAATATCTTTGCTCACATTTCTGTTGGGGCTTCTGACCTTATATACTAGATATTGTCTTAAAACTTTTAAACGTGATACTTATCTTCTCCCTGCTATCATGTTTCACTGTCTTAATTGTGCCAACAATGTCTTTTAATGAACAGAGTTCTTAATTTCTATGTAACCATATCTATTAATATCTCTATATTGTATATGCTTTTGGCATATTGTCAAATACCTATCTCTCCACTCCTGAGTATTACAATTATTTTTTTTCTGTTACATCTTAGATGCTTTTTCATCACATTGTATATTTAATCTGGACCCACCATTATATATGATGTTAATTAGGGTACATGATTTTTCTCCTTATTGTAAGTTTGTTTCCATTATACCATTCTAAACAATATGCTGCTTTCAGTTTCATTATTTGTCAATTAAGCATGCTATTTCTGAGCTATTTTCATACATTGGTTCCTTTGTTGCTGTGCCAATATCAGCCTTTTAAATTACTACGGCCTTATAATAAGTCTTCATAACTGATGGAGTTAGCATTCTCTTTTTATTTTTATTTGATAAAATTGTAATAGCTGTTCATGGGCCTAAATTCTGGCACAAACATTTTTAAAATGAGTTTGACAAGTTTCTCCAAAATTCAACCCAGAAATTTTAATAGAAACCATTTTTATTTGTAGCTTAATTTAAAGACTTTCTATTTTTGTAACAATTTGCATAGAATAGGAATTAACTCCTTCATAGAAATTCAGTGGAGTTTGCCTATAAAAACACTTGGACCTGCAGCTTTGAGGAGGATGGATTTTACCTATTATTTTATATTTCTAAATGTCTATTATCAGGTTAATGTTTCCATTTTTTCTAATGTCATTTATTTTGGAAATGTATTTCATCTACTTTTTTTTACTAATTTATTAATCTATTAAATGTATTTTAATCTGTTTTTGTCATTAGCAATTTTGTCCTTTTCAATATATATTTTTAAAATATGCATCCTTTTTTTCTTGAATTATCATATCAGAAGTGTACAATATTAGTGTTTTCCAAATATCAGTATCGGGTATTAACTTTATTATTTTTCTTAATGCACTGTTTCATTGAAATGTGCCCTTAGATTCCTTTTTTTTTTTCTGATTTGATTTTACTCTGTTGATTGTTTTCTAACTAATTATGTTGTCATCTTAGCTCATTTAAAACATGTATTTACTGACAACTACAGTTAAATTTAGTGCATAAGTTGGGTCTTACAAATTTTCAAATTTATTTATTACCATTCAGTTCTAATTTTTCATGATATGCTTTATGAACATAGGGTTATTTACTAGTTTACCAGCATGATATTTTGTTTGCAGACACATGGAATTTTTAATGCTATCTGTTGTTATTAATTTCTGTTTTTGAAGGGGTCATAGGAAATAGTATGCATGGGGTTGCTTTCTTTTTTAAAATTTTGTTATATCTTTTTCTCCATTTCTCTCTTCCTTTCTACTTATTTATTTTAATAATTTTTGTGGCTTTCTTTCAGTATTGCATGGTCAATTTTCTAAATGTCACGTGTACTCGAATATGTATTGTTTCTTGGGTGCAAAGCTCTAGACTTGTCTCATAGATTA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3140:HG2_PB_pbsv_1753:HG3_PB_pbsv_1743:HG4_PB_SVrefine2PBcRDovetail_946:HG4_Ill_SVrefine2DISCOVARDovetail_1185:HG3_PB_SVrefine2PBcRDovetail_939:HG3_Ill_SVrefine2DISCOVARDovetail_1160:HG2_PB_SVrefine2PBcRplusDovetail_5546:HG2_PB_SVrefine2Falcon2Bionano_639:HG2_Ill_SVrefine2DISCOVARplusDovetail_6399:HG2_10X_SVrefine210Xhap12_1313:HG2_PB_SVrefine2Falcon1plusDovetail_6012:HG3_PB_SVrefine2Falcon1Dovetail_1090:HG4_PB_SVrefine2Falcon1Dovetail_1099:HG4_PB_pbsv_1752:HG4_PB_HySA_2558;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1313:HG2_Ill_SVrefine2DISCOVARplusDovetail_6399:HG2_PB_SVrefine2Falcon2Bionano_639:HG2_PB_SVrefine2PBcRplusDovetail_5546:HG3_Ill_SVrefine2DISCOVARDovetail_1160:HG3_PB_SVrefine2PBcRDovetail_939:HG4_Ill_SVrefine2DISCOVARDovetail_1185:HG4_PB_SVrefine2PBcRDovetail_946;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0408905;ClusterMaxSizeDiff=0.0408905;ClusterMaxEditDist=0.159677;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=2160;DistBack=12591;DistForward=51844;DistMin=12591;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=2:22046510-22046510;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2752.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:117:1/1:0:13:1:13:1/1:0:5:0:6:1/1:0:42:./.:16:245:.:2086:.
chr2	23190999	HG2_PB_SVrefine2Falcon2Bionano_640	T	TGAGACTGGGTAATTTATTTATTTATTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGACTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATTCTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCTGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCTTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATTTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGTGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGGGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCTGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCATAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCATCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3141:HG2_PB_pbsv_1756:HG2_PB_PB10Xdip_16925:HG2_PB_HySA_3212:HG4_PB_SVrefine2Falcon1Dovetail_1101:HG2_PB_assemblyticsPBcR_12804:HG4_PB_SVrefine2PBcRDovetail_948:HG2_PB_SVrefine2Falcon1plusDovetail_6013:HG2_PB_SVrefine2PBcRplusDovetail_5547:HG2_PB_SVrefine2Falcon2Bionano_640:HG2_PB_SVrefine2PB10Xhap12_1379:HG2_PB_HySA_3211;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_640:HG2_PB_SVrefine2PBcRplusDovetail_5547;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0433306;ClusterMaxSizeDiff=0.0433306;ClusterMaxEditDist=0.0937753;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=6074;DistBack=37153;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:23191000-23191016;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9998;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2753.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:100:1/1:3:21:0:18:./.:1:5:1:11:1/1:0:15:1/1:0:1534:.:5984:.
chr2	24478526	HG2_PB_SVrefine2PB10Xhap12_1386	T	TGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGCAGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACGTAGTGAAACCCTGTCTCTACTAAAAATACAAAAATTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1386:HG2_PB_HySA_3228:HG3_PB_HySA_2615:HG2_PB_PB10Xdip_17249:HG2_PB_SVrefine2PBcRplusDovetail_5552:HG4_PB_pbsv_1762:HG4_Ill_SVrefine2DISCOVARDovetail_1198;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1386:HG4_Ill_SVrefine2DISCOVARDovetail_1198;NumExactMatchSVs=2;ClusterMaxShiftDist=0.160338;ClusterMaxSizeDiff=0.160338;ClusterMaxEditDist=0.219178;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=123;DistBack=4073;DistForward=55;DistMin=55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=243;REFWIDENED=2:24478527-24478769;PctSeqSimilarity=0.993;PctSizeSimilarity=1;PctRecOverlap=0.8455;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=94;MatchId=2755.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:35:1|0:8:30:17:0:./.:0:3:3:0:0/1:19:8:./.:.:.:.:.:.
chr2	24487570	HG2_Ill_GATKHCSBGrefine_1113	C	CACACACACACACACACACACACACACACACAAACACACGTAGCATGAATCTATTTACCTACTCTGTTCCACCTGTCGAAAATCTGTTGTTTAT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17250:HG3_PB_pbsv_1752:HG2_PB_SVrefine2Falcon1plusDovetail_6016:HG4_PB_pbsv_1763:HG4_Ill_GATKHCSBGrefine_1151:HG3_Ill_GATKHCSBGrefine_1118:HG2_Ill_GATKHCSBGrefine_1113:HG2_PB_SVrefine2Falcon2Bionano_647:HG2_PB_SVrefine2PBcRplusDovetail_5553:HG2_10X_SVrefine210Xhap12_1326:HG2_PB_SVrefine2PB10Xhap12_1387:HG4_Ill_GATKHCSBGrefine_1150:HG3_Ill_GATKHCSBGrefine_1117:HG2_Ill_manta_471:HG2_Ill_250bpfermikitraw_2202:HG3_PB_HySA_2616:HG4_PB_HySA_2583:HG2_PB_HySA_3229:HG2_PB_PB10Xdip_17251;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1113:HG3_Ill_GATKHCSBGrefine_1118:HG4_Ill_GATKHCSBGrefine_1151;NumExactMatchSVs=3;ClusterMaxShiftDist=0.198895;ClusterMaxSizeDiff=0.173913;ClusterMaxEditDist=0.345178;PBcalls=11;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=93;DistBack=1;DistForward=19;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=88;REFWIDENED=2:24487545-24487632;PctSeqSimilarity=0.9231;PctSizeSimilarity=0.8925;PctRecOverlap=0.8925;SizeDiff=10;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=90;MatchId=2756.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:83:1/1:2:54:1:13:./.:0:33:14:26:0/1:2:17:./.:.:.:.:.:.
chr2	24796756	HG2_PB_SVrefine2Falcon2Bionano_650	T	TAGAAGTAGATTAATATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGTATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGATACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCGGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCTTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAGAATTGTAAAAAAAAAAAAAAATTATAAATAAAACAAAGAAGAATATGTGAGAGGAGCTGAATGTGCCCCATAAAGCCTAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3142:HG3_PB_pbsv_1754:HG2_PB_PB10Xdip_17259:HG2_PB_pbsv_1764:HG2_PB_assemblyticsPBcR_12820:HG2_PB_HySA_3235:HG4_PB_SVrefine2Falcon1Dovetail_1108:HG2_PB_SVrefine2PB10Xhap12_1391:HG3_PB_SVrefine2PBcRDovetail_949:HG2_10X_SVrefine210Xhap12_1327:HG2_PB_SVrefine2Falcon1plusDovetail_6018:HG2_PB_SVrefine2PBcRplusDovetail_5556:HG2_PB_SVrefine2Falcon2Bionano_650:HG3_PB_SVrefine2Falcon1Dovetail_1096;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_650:HG2_PB_SVrefine2PBcRplusDovetail_5556;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0858407;ClusterMaxSizeDiff=0.0855457;ClusterMaxEditDist=0.204844;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=3272;DistBack=56909;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:24796757-24796771;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:97:./.:0:5:0:1:1/1:0:12:0:6:1/1:0:22:1/1:5:867:.:3118:.
chr2	25408714	HG2_Ill_SVrefine2DISCOVARplusDovetail_6419	A	ACTGGGCGCAGAGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCCAAGGCGGGTGGACCACCTGAGGTCAGGAGTTTGAGAACAGCCTGATCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCAGGTGTGGTGGCGCAGGTCTGTAATCTTAGGTACTTGGGAGGCTGAGGCAGGAGAACCGCTTAAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATTACACCACCGCACTCCAGCCTGGGCGACAAAGCAAAACTCCATCTCAAAATAAATAAATAAATAAATAAATAGTTTTAAGCTTTTCCAGTCATGTTCATTGGGAAGGGAGTTCAAGGTACCTTGTCTGCCATACTGAGGGACATAGAAGTTTCACATGGTAACTTTCTGCCCAGGATGCACATTCCTTTTTTCAAATACATTTATTGTTTATTTAGAGGCATTTCTAAACAACTCTTTCTGAGGCTTTTTTTTTTTTTCGGAGACGGAGTCTCACTCTGTTGCCCAGGATGGAGTGCAGTCACGCGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCGTGCCACCACACCGGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCCAGCCAAAGCTTTTATACTTCTGAACTCCATGTAAAAACTACTCGCTTATGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1110:HG2_PB_pbsv_1767:HG2_PB_PB10Xdip_17262:HG3_PB_pbsv_1757:HG2_PB_HySA_3247:HG4_PB_pbsv_1768:HG4_PB_HySA_2599:HG2_PB_SVrefine2Falcon1plusDovetail_6020:HG3_PB_SVrefine2PBcRDovetail_951:HG2_PB_SVrefine2PBcRplusDovetail_5558:HG2_PB_SVrefine2PB10Xhap12_1393:HG2_PB_SVrefine2Falcon2Bionano_652:HG2_Ill_SVrefine2DISCOVARplusDovetail_6419:HG2_10X_SVrefine210Xhap12_1331:HG4_Ill_SVrefine2DISCOVARDovetail_1206:HG3_PB_SVrefine2Falcon1Dovetail_1098;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1331:HG2_Ill_SVrefine2DISCOVARplusDovetail_6419:HG2_PB_SVrefine2Falcon2Bionano_652:HG2_PB_SVrefine2PB10Xhap12_1393:HG2_PB_SVrefine2PBcRplusDovetail_5558;NumExactMatchSVs=5;ClusterMaxShiftDist=0.039807;ClusterMaxSizeDiff=0.0386007;ClusterMaxEditDist=0.167577;PBcalls=13;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=821;DistBack=11562;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=595;REFWIDENED=2:25408379-25408973;PctSeqSimilarity=0.9909;PctSizeSimilarity=0.9976;PctRecOverlap=0.866;SizeDiff=2;StartDistance=-109;EndDistance=-109;GTMatch=0;TruScore=95;MatchId=2758.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:./.:0:2:0:14:./.:0:7:0:0:1/1:0:11:1/1:8:146:.:796:.
chr2	26473934	HG3_Ill_GATKHCSBGrefine_1126	A	ACACTAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_3254:HG4_PB_SVrefine2Falcon1Dovetail_1111:HG2_PB_pbsv_1770:HG4_PB_pbsv_1769:HG3_PB_pbsv_1759:HG3_PB_assemblyticsfalcon_13300:HG2_Ill_breakscan11_3143:HG2_PB_SVrefine2Falcon1plusDovetail_6021:HG3_Ill_MetaSV_2602:HG4_Ill_MetaSV_2545:HG3_PB_SVrefine2PBcRDovetail_953:HG3_Ill_GATKHCSBGrefine_1126:HG3_PB_SVrefine2Falcon1Dovetail_1099:HG3_PB_HySA_2634;NumClusterSVs=14;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_1126:HG3_PB_SVrefine2PBcRDovetail_953:HG4_Ill_MetaSV_2545;NumExactMatchSVs=3;ClusterMaxShiftDist=0.207006;ClusterMaxSizeDiff=0.203175;ClusterMaxEditDist=0.245223;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=331;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=2:26473935-26473946;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2760.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:37:0|1:20:0:0:24:./.:0:3:17:0:0/1:34:13:0/1:12:32:.:.:.
chr2	26556298	HG2_PB_PB10Xdip_17264	T	AGGATTAGTTTGGACCTGTATCTCAGAACTAAAGAATAAATCCCACCAGCCGGGAATGATGGCTCAAGTCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCGCCTGAGCTCAGGAGTTCGTGACCAGCATGGGCAACACCGTGAAACCCTATCTCTACTAAAATACAAAAAATTAGCCAGGCATGGTGGCATGCGCCTTTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATCGCTTGAACCTGGAAGGTGAAAGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCTGTCCCCCGCTGCCGCAAAAAGAAAAGAAAAAAAAGAATAAATCCCACCAAATAGGAGTTTTCAGTCAAATGAATTAAGACACCACACTTGGCTGGCGCGGTGGCTTATGACTGTCATCAAAGCACTTTGGGAGGCCAAGGTGGGTGGATCACTTGAGTCTAAGAGTTTGAGGCCAGCCTGGGCAACATGGAAAAACCACATCTCTACAAATAATAAAAAAAATTAGCCTAGTATGGCGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGGGCCCAGGAGGTCGAGGCTGCAGTGAGCTGTGACCACACCACTGCACTCCAGCCTGGGCAAGAGAGTGAGACCCTGTCTCAAAAAACAAAAAAAGAAAAAGAAAAAAAAAACACCACTCTTTTTGAGCGAAGTAGAATACCTAGGTTAAAAATATAAAAGCAATCCGATAAACTACAAAAACAAACTTTGATTTTAGATTATCAAAGCAATGCAGGCTTGTCAAAAAAATTAAAACGATTGAGACATTTGTCATTTAGAAACCAAAAGTACTTACGGCTCCCTTTCTAATCATGAAATGAACCAAAGTATATACTTTGCCTATCAGTTGTTTACTTAAAAAGTGTTATGTTTCTAGGCTGGGTGCGGTGGCTTACGCCTGTAATCCCAGCATTTTGGGAGGCCGAGGAGGCCGAGGAGGGTGGGTCACCTGAGGTCAGGAGTTTGAGACCAGCCTGACCGACATGGAGAAACCCCGTCTCTACTAAAAATTCAAAATTAGCCGGGTGTGGTGGGGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGGCGGAGGTTGTAGTGAGCTGAGATCGGGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCATCTCAAAAATAAAAAAATGTTATGTTTCTTGTTCTTATTTTTAAAGATCAAATAACCAGAACTATTCATATTGCTCTCACACACACAAAAGAAATATACAAAGATTTTCTTAACCTGAATATCATTCTCTGATTTTTTTTTTCTTGAGAACCTGTGAATTAAAAAAAAAAAAAAATTTAGGCTGAACACAGTAGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATGCAAAAATTAGCTGGGCATGGTGGCACGTCCCTGTAATTCCAGCTACTCAGGAAGCTGAGGCAGGAGAATCGCTTGAACCCACGAGGCGGAGGTTGCAGTGAGCCGAGACTGTGCCACTGCACTCCAGCCTGGGAGACAGAGTGAGACTCCAACTCAAAAAAAAAACAAAATTAAATAAATGTATTAAAGAATGGCTCCAGAAGTGGAAATAACCTGACACTCATCAGTAGTGGAATGGATAAACAAACTGTAGATAGGCATGCAATCTGCTACCATACAGAAACAGAAATGAATGAACTGGGTCTATATGCATCAATCTCAAAACAATGTTGAGTGTCTTTTTTTTTTTTTCAGTTGGAAACATTTTAGATATTTTAAGACAAAAAATGAGCATGGACTTTTTTTTTTTTTTTAAACACACATACACATCTAATGGCCAAAGTGCACTAAGGAAATGAGCTCCTGATCTGTCCTCCGCAGTCCCCATCCTGTGGTTGAAGCTTTTGCAGGCCCTCCCTCTTCCTCTCCAATGCACTAGGAAGAGACAGTGGCTGCTTTACACCACAGCCATAAGGCGTTTTGACAGACGGAGGGCACTGCTGAAGTTGGGAGTCTTTCTGTAAGATGAAGGAGGGAGACTTCTCCCCACCAAGTTTAGGTAGATCAGTGTGTTGAAGTTTAAAACAAAAATAAAAATAATTCACATAATCAGCACTTCAAAAAATACTGAATTTCAGATTTCCCACCAAGACAGCTCAAACAGAGCAGTGACAATCTAGATCTTTCCATTCCTTCTGACAGTAGACTTAGGCCCTAGAAGTATCTGCTGCGACTGCAGCTGCTGCCTTGGCTCCATTTGTGACCTTTCAGGCTCAAAGGCAACAGGAAGAACCAGGGTCGTAAAGGAAGTGGGCCCAACCTGCAAGGCTGTGTTGGAAAACCTGTACATTTTTTGACCTATGAAGACGGAGAGGTTAAAAGTGGCTCTGACCAGGGACCAAACCCTCTCCAGGAACATGTCTGTTAGACCCCACAGTCTCTCCAACAGGGTCTCATCTAGCTCCTGTTGTCAACCTCTTTCAGCTCTTCCTCAGGCTTCTCAGAGGCACCTTTCAGAAGAAAACTTGTGTTCTGGGATAAACTCTTGTTTTCTATACTCACGCAGAACTTCTGGTGACCAAATGTGTGGGGTTTTCCCACACCAAGCAATCCTCCATTACTTGGTGGACACCGCTGGGTGTCCTACAATTTAATTCAATACTGATGCTGTCTAGTCGGAGTGTGAGATCTTACAGGTTAAGGGCTCAGTCTCACAGGACTGCCCCCTTGCCACCCAGTTCAGACACCAATTTGCAAGTCCAGTACGTCACCTGTGCTTCTGATTGGCCAGCTATAAAACCCACGACTCCCTCCTCAGTTTCAGTAATTGGTTAGAACAGCTCATGGAACTCAGAAATAACAGTTTACTTAGTAGATTACTGGTTTGTTATAAAAGGATACAACTCAGGAACAGCCAGACGGGAGGGAGGCACAGGGCAAGGTACTCAGGAAGAGGTGCGGAGCTTCCATGCCTGCTCTGGGCACACCATCCTCCCAGCATCTCCACATGTTCACCAGCCTGTAAGCTGTCTGAACTCCTATACTCTAGGGAGTTGTTTGGAGGCTTCCTCATGCAGGCATGATTGATTATTAACTCAATCTCCAGCTCCTCTCCCCTCCCAGGAGGGTGGGAAGCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17264:HG4_PB_pbsv_1770:HG2_PB_pbsv_1771:HG4_Ill_SVrefine2DISCOVARDovetail_1210:HG2_Ill_SVrefine2DISCOVARplusDovetail_6426:HG2_PB_SVrefine2Falcon2Bionano_653:HG2_10X_SVrefine210Xhap12_1338:HG4_PB_SVrefine2Falcon1Dovetail_1112:HG2_PB_SVrefine2PBcRplusDovetail_5560:HG3_PB_SVrefine2Falcon1Dovetail_1100:HG2_PB_SVrefine2PB10Xhap12_1395:HG2_PB_SVrefine2Falcon1plusDovetail_6022:HG3_Ill_SVrefine2DISCOVARDovetail_1184:HG3_PB_SVrefine2PBcRDovetail_954:HG2_PB_HySA_3255:HG4_PB_HySA_2602:HG2_Ill_breakscan11_3144:HG2_PB_PB10Xdip_17265;NumClusterSVs=18;ExactMatchIDs=HG2_PB_PB10Xdip_17264:HG2_PB_PB10Xdip_17265;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0691075;ClusterMaxSizeDiff=0.0691075;ClusterMaxEditDist=0.183597;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=3298;DistBack=13836;DistForward=2885;DistMin=2885;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:26556299-26556297;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9991;PctRecOverlap=0.9994;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2761.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:102:1/1:0:29:1:28:./.:0:12:0:4:1/1:1:42:1/1:6:543:.:3222:.
chr2	26937336	HG2_10X_SVrefine210Xhap12_1341	T	TGGGGCCCTCCATCTGGAGTGGCTGGGGCATAGACAGGGCACAGTGCCCCTTTGGACCAGAGCAAGTATAGGGGACTTCTGAAAGGAAACAGTGCCACATAGCTAACGTCAAAGGCCAGCAGGCAGAAGCCCAGCCCTCTCCCTCCCGTCCCTCAGGCTGCATTGTTCCTGTCTCTGCCTTGCTCTGCCTTTCTCGGGCTTCTCTTCCCCCGCATGTGGCTTGGGCTTACCCTGGTCCCAGCCAGGACTCACCTCTTTCTAACCCTGCAGCTCAGCCCCTCACAGCTGACCCAGCCCCTCAGCCCATCACAATTCCTGGAAGAGAGAATGTGAATTGCTAAGCCCAGCCAAGTCCTCTCAGCCCAGGTGCCCAACCCTGGTCCAATCTGCTCTGGTGCCAGGATGACATGGTACAAAGGGGCTGCCTAGGTCCTCCCTTGACTAGGGTTGCTGTAGGACAGACAGTTCCAAAAAGGTAGAAGCGGGCAGAGCCCGCAACTATGCCCACCACAGAGAGCCTCCCTGGATCCCTGACCCCTGCACTCCAGCTTCCCCCTCTCACCTCCTGCTCTGTCTGGCTCAGGGCCACACTGACACATCCCTAGGACAGAAAGGACAGGCTACCCAACTTCAGGGTGCATCTACCTGGCAGAAAGCAGGGTGGGGCGAGGCTCAGGAGAGAGGAGCTTTGGCTAGGAAGGCCTCTTCCATCCTCACAGTTTGAGCACCTGCTGTATGCACGGCACCAAGACTGCAAGGCCAGATTCTGCCTAGAGTGGAGTACAATGGTCTTGGGATGTTGGCCTGTTGGACATGCTTTCTATGCGCTTTGACAAAGGGAGTGGTCCTGGGGACATCTGAGGGGGTCAGACAAGGTTGAATCCTACCTTTGCCAATTTTTATCTGTGTGACCTTGGGCCAGCAGTGTCTAACCTTCCTGAACCTTAGTTTCCCCATCAAAAAGGAGCAAATCATGGCCACCTTCAGGTCATGGGGAACATTAGGGATAACAAGTGTGAGGGCATCCAGGTTCCCTGCCACCATTGCCACTGTTCACGGAGGATACCATAGCACAGGCTCCGCTCAGGCGTGTGAATGCCTCCCTTTCTCGCCCTTACTTCCTATGCTCCATCCTCTGCATTCCCACCTGCAGCCCAGACTCAGCTGCACAGAGGGGAGGCCAGCAGGACAGCACCCACGCAGGGGTCCAGGCCTGAGCCCTGACCACCTCCCAAAAGGCTTGTCCAGTGCCCAGCACCCTTCCGTGTGAGCCAGCCCTCATCCCCCGTGCTGTGTAGGCAGACTTGACTAAAAGGAGCTTTGCTCAGAGTCACCGCTGTACATAAGGAGATGGGTAAATAGGCCAGCCAGCGCCTGCCAAGAGAGGCCCACCGAGTGGCAGAGATGGATGTGACGTGGGGAGAGCAGAGGAGGCTCCTGGGGCCACAGCAGGAAGGAGGCTTCCTGGGGGAAGGCAAGGTGCAGGGGGAGGAACAGCAGCTAGCACTGCATCGACGTAGGAGAGGTGCTGACTATTGAGAAAGGAAGGGAGGTCTCTGCACTAACTCTATAAATCTGAAACTGTTCTAAAATTTAAAAGTTGGTTTTAAAACATAGTAAATGGCAAACAAACCAGAAAAGAAAGAAAGAAGGAGGAAAAGAGAGAGTGTAGCCTCAGACATTGACCTTGATCCAATCTGTAGTGACAACCAGGGCCAAGCAGCTCTGCACACCAGCCAGGTGTTCACACTGACTCTGAACAATGTTTCCAGGTGTCCAGGGTCATCTTCCAAGGCTGCAAGACGTGGAAAATGCCATGCTTCCAGCCACAGGAACGCTGGCAAGATGCCTGGGCCTTCTGACTCCCTTTCCAGGTTCCTGGGTCCCGCTTTCACCGAATGGGCCCCTCTGGCACAGATGTATCATATCCTGGGGCAAATCTTTGCTCAGAGCCATTTCCCACCTGCCTGCTGGCAACTGTTTTAGAACAGTTTCAGATTTCTAGAGTTAGTGCAAAGACCTCCCTGCCTTTCTCAACAAGTCTTTGTTCCCAGAGGGCAAGATCCAGCTGGCCTGTCTCTGCATCCTCTCTTCACTTAGCCTAGTGCCTGGCACAGAGTAGTAGGTGCTTAAGAAATGTTTGCTCAATTAATTAATTAAGACAAGCTAAGAGGGAATAAAGCCATTTTCGCCTTGCTGATTTTCCAGATGATATTCTTGAGACCAGGCAAGTGCCGCAGGCTCCCTGGGGACCCTGCTTCCCACTCAGCCTCCCCAGGTGCCACAGCTCCCTCTGCCAGAGGCAGGGTGTCTTCTTCCAGGGCTGGCCATGAGCCCCCAACAGCCTGTGGCCAGCCTCAGCCTGCGGCCTCCTGCCATTTGGCTCAGGCCAGTGGATGGGTCCTCTGTGGAGACCCA	20	PASS	ClusterIDs=HG2_PB_HySA_3263:HG4_PB_HySA_2607:HG3_PB_SVrefine2Falcon1Dovetail_1103:HG4_PB_SVrefine2PBcRDovetail_951:HG2_PB_SVrefine2Falcon1plusDovetail_6025:HG4_Ill_SVrefine2DISCOVARDovetail_1213:HG2_Ill_SVrefine2DISCOVARplusDovetail_6429:HG2_10X_SVrefine210Xhap12_1341:HG3_Ill_SVrefine2DISCOVARDovetail_1188:HG2_PB_SVrefine2PBcRplusDovetail_5563:HG2_PB_SVrefine2PB10Xhap12_1398:HG2_PB_SVrefine2Falcon2Bionano_655:HG3_PB_SVrefine2PBcRDovetail_957:HG4_PB_SVrefine2Falcon1Dovetail_1116:HG2_Ill_breakscan11_3145:HG2_PB_PB10Xdip_17298;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1341:HG2_Ill_SVrefine2DISCOVARplusDovetail_6429:HG4_Ill_SVrefine2DISCOVARDovetail_1213;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0127914;ClusterMaxSizeDiff=0.0127914;ClusterMaxEditDist=0.0333059;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=2417;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=2:26937337-26937337;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2762.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:105:1/1:0:30:0:11:./.:0:3:0:4:1/1:0:41:1/1:8:270:.:2471:.
chr2	29806413	HG2_PB_PB10Xdip_17308	AGTTT	AGTTTCTGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCGCCTCGGCCTCCCAAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCGGCCTTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17308:HG2_PB_pbsv_1788:HG2_PB_SVrefine2Falcon2Bionano_662:HG2_PB_SVrefine2PB10Xhap12_1407:HG2_PB_SVrefine2PBcRplusDovetail_5570:HG2_Ill_breakscan11_3146:HG2_PB_HySA_3298;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_17308:HG2_PB_SVrefine2PB10Xhap12_1407;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0524017;ClusterMaxSizeDiff=0.0494905;ClusterMaxEditDist=0.104803;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=343;DistBack=23807;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=2:29806418-29806427;PctSeqSimilarity=0.9843;PctSizeSimilarity=0.98;PctRecOverlap=0.9886;SizeDiff=-7;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2764.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:40:0|1:20:1:0:26:./.:0:3:15:0:0/1:27:9:0/1:10:35:.:.:.
chr2	29847001	HG4_Ill_manta_414	T	TTATAAACCACGGTCACTGCAGGGCAGGAGGGTCGAGGTAGGAGAGTGTGTGACAGGAAAATAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3147:HG3_PB_pbsv_1775:HG4_PB_pbsv_1786:HG4_PB_assemblyticsfalcon_13114:HG4_Ill_svaba_2113:HG4_Ill_manta_414:HG4_Ill_Krunchall_2359:HG4_Ill_GATKHC_2728:HG4_Ill_GATKHCSBGrefine_1169:HG4_Ill_Cortex_1757:HG4_Ill_250bpfermikitraw_2231:HG4_Ill_150bpfermikitraw_2160:HG3_Ill_svaba_2162:HG3_Ill_manta_362:HG3_Ill_Spiral_1798:HG3_Ill_Krunchall_2289:HG3_Ill_GATKHC_2817:HG3_Ill_GATKHCSBGrefine_1142:HG3_Ill_Cortex_1809:HG3_Ill_250bpfermikitraw_2238:HG3_Ill_150bpfermikitraw_2141:HG2_Ill_svaba_2090:HG2_Ill_manta_478:HG2_Ill_SpiralSDKrefine_8321:HG2_Ill_Krunchall_2267:HG2_Ill_GATKHC_2737:HG2_Ill_GATKHCSBGrefine_1132:HG2_Ill_Cortex_4193:HG2_Ill_250bpfermikitraw_2241:HG2_Ill_150bpfermikitraw_2053:HG4_PB_HySA_2628:HG2_PB_pbsv_1789;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2053:HG2_Ill_250bpfermikitraw_2241:HG2_Ill_Cortex_4193:HG2_Ill_GATKHCSBGrefine_1132:HG2_Ill_GATKHC_2737:HG2_Ill_Krunchall_2267:HG2_Ill_SpiralSDKrefine_8321:HG2_Ill_manta_478:HG2_Ill_svaba_2090:HG3_Ill_150bpfermikitraw_2141:HG3_Ill_250bpfermikitraw_2238:HG3_Ill_Cortex_1809:HG3_Ill_GATKHCSBGrefine_1142:HG3_Ill_GATKHC_2817:HG3_Ill_Krunchall_2289:HG3_Ill_Spiral_1798:HG3_Ill_manta_362:HG3_Ill_svaba_2162:HG4_Ill_150bpfermikitraw_2160:HG4_Ill_250bpfermikitraw_2231:HG4_Ill_Cortex_1757:HG4_Ill_GATKHCSBGrefine_1169:HG4_Ill_GATKHC_2728:HG4_Ill_Krunchall_2359:HG4_Ill_manta_414:HG4_Ill_svaba_2113:HG4_PB_assemblyticsfalcon_13114;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0775194;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.155039;PBcalls=5;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=63;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:29847000-29847002;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2765.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:30:./.:16:7:13:20:0|1:26:0:0:33:0/1:26:27:./.:.:.:.:.:.
chr2	30164672	HG2_PB_SVrefine2PBcRplusDovetail_5571	T	TATCATCACCAACATCATCACCATCATCATCACCATCACCATCGTCCTCACCATCATCACCATCATCATCACAATCATTATCACCACTATCACCATCACCATCATCACCATCATCACCATCATCATCACCATCATCACCATCATCACCAACGTCATCACCAACGTCATCACCATCATCACCAACGTCATCACCATCATCACCATCATCATCACAATCACTATCACCACTATCACCATCACCATCATCACCATCATAACCATCACAATCACTATCACCACTATCACC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_1205:HG4_PB_HySA_2630:HG2_PB_HySA_3305:HG2_PB_HySA_3304:HG2_PB_pbsv_1793:HG4_Ill_manta_416:HG3_Ill_manta_364:HG4_Ill_MetaSV_2551:HG4_Ill_GATKHCSBGrefine_1171:HG2_Ill_manta_480:HG2_Ill_GATKHCSBGrefine_1134:HG3_Ill_GATKHCSBGrefine_1144:HG4_PB_HySA_2629:HG2_PB_PB10Xdip_17338:HG2_Ill_breakscan11_3148:HG3_PB_pbsv_1778:HG4_PB_SVrefine2PBcRDovetail_958:HG4_PB_pbsv_1790:HG4_Ill_SVrefine2DISCOVARDovetail_1227:HG3_PB_SVrefine2PBcRDovetail_965:HG4_PB_SVrefine2Falcon1Dovetail_1126:HG3_PB_SVrefine2Falcon1Dovetail_1112:HG2_PB_SVrefine2PBcRplusDovetail_5571:HG2_PB_SVrefine2PB10Xhap12_1409:HG2_PB_SVrefine2Falcon2Bionano_663:HG2_PB_SVrefine2Falcon1plusDovetail_6037:HG2_Ill_SVrefine2DISCOVARplusDovetail_6444:HG2_10X_SVrefine210Xhap12_1353;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1353:HG2_Ill_SVrefine2DISCOVARplusDovetail_6444:HG2_PB_SVrefine2Falcon1plusDovetail_6037:HG2_PB_SVrefine2Falcon2Bionano_663:HG2_PB_SVrefine2PB10Xhap12_1409:HG2_PB_SVrefine2PBcRplusDovetail_5571:HG3_PB_SVrefine2Falcon1Dovetail_1112:HG4_PB_SVrefine2Falcon1Dovetail_1126;NumExactMatchSVs=8;ClusterMaxShiftDist=0.110184;ClusterMaxSizeDiff=0.110184;ClusterMaxEditDist=0.216561;PBcalls=16;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=285;DistBack=52092;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=160;REFWIDENED=2:30164673-30164832;PctSeqSimilarity=0.9822;PctSizeSimilarity=0.9896;PctRecOverlap=0.8201;SizeDiff=-3;StartDistance=-50;EndDistance=-50;GTMatch=0;TruScore=93;MatchId=2767.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:90:1/1:0:30:2:28:1/1:0:23:0:10:1/1:0:23:./.:.:.:.:.:.
chr2	30642311	HG3_Ill_150bpfermikitraw_2147	A	ATATAATTATTATATATAATAATTATATATATAATTATTATATATAATAATT	20	PASS	ClusterIDs=HG2_PB_pbsv_1795:HG3_Ill_scalpel_1719:HG3_Ill_GATKHC_2826:HG3_Ill_GATKHCSBGrefine_1146:HG2_Ill_SpiralSDKrefine_8327:HG2_Ill_GATKHC_2746:HG2_Ill_GATKHCSBGrefine_1135:HG3_Ill_Krunchall_2295:HG3_Ill_250bpfermikitraw_2245:HG3_Ill_150bpfermikitraw_2147:HG2_Ill_Krunchall_2272:HG2_Ill_250bpfermikitraw_2246:HG2_Ill_150bpfermikitraw_2058:HG3_PB_pbsv_1782;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2058:HG2_Ill_250bpfermikitraw_2246:HG2_Ill_Krunchall_2272:HG3_Ill_150bpfermikitraw_2147:HG3_Ill_250bpfermikitraw_2245:HG3_Ill_Krunchall_2295:HG3_Ill_scalpel_1719;NumExactMatchSVs=7;ClusterMaxShiftDist=0.160714;ClusterMaxSizeDiff=0.126126;ClusterMaxEditDist=0.321429;PBcalls=2;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=3;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=78;REFWIDENED=2:30642274-30642351;PctSeqSimilarity=0.972;PctSizeSimilarity=0.9444;PctRecOverlap=0.9273;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=2769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:26:0|1:23:5:3:18:./.:2:5:8:1:0/1:33:32:./.:.:.:.:.:.
chr2	31559680	HG2_PB_SVrefine2Falcon2Bionano_665	T	TAAAAAGAGGAAGCCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1115:HG4_PB_pbsv_1795:HG2_Ill_breakscan11_3149:HG2_Ill_GATKHCSBGrefine_1138:HG2_PB_pbsv_1798:HG2_Ill_MetaSV_2472:HG3_PB_pbsv_1785:HG4_Ill_MetaSV_2554:HG3_Ill_MetaSV_2611:HG4_PB_assemblyticsfalcon_13130:HG2_PB_SVrefine2PBcRplusDovetail_5572:HG2_PB_SVrefine2PB10Xhap12_1413:HG2_PB_SVrefine2Falcon2Bionano_665:HG2_PB_SVrefine2Falcon1plusDovetail_6039:HG3_PB_SVrefine2PBcRDovetail_969:HG4_PB_SVrefine2PBcRDovetail_961:HG2_10X_SVrefine210Xhap12_1358:HG4_PB_SVrefine2Falcon1Dovetail_1130:HG4_PB_HySA_2641:HG2_PB_HySA_3319:HG3_PB_HySA_2680:HG2_PB_PB10Xdip_17344:HG2_PB_PB10Xdip_17343;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_665:HG2_PB_SVrefine2PB10Xhap12_1413;NumExactMatchSVs=2;ClusterMaxShiftDist=0.155521;ClusterMaxSizeDiff=0.155521;ClusterMaxEditDist=0.201201;PBcalls=17;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=320;DistBack=47783;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:31559681-31559696;PctSeqSimilarity=0.9939;PctSizeSimilarity=1;PctRecOverlap=0.972;SizeDiff=0;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=98;MatchId=2770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:25:0:25:1/1:0:9:0:12:1/1:0:20:1/1:2:74:.:.:.
chr2	31952196	HG2_PB_SVrefine2Falcon2Bionano_666	C	CAAAAAGTAGAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17357:HG4_PB_pbsv_1796:HG2_PB_HySA_3322:HG2_PB_pbsv_1799:HG4_PB_HySA_2645:HG4_PB_assemblyticsfalcon_13135:HG3_PB_HySA_2686:HG2_PB_SVrefine2Falcon1plusDovetail_6040:HG3_PB_SVrefine2PBcRDovetail_970:HG2_10X_SVrefine210Xhap12_1360:HG2_PB_SVrefine2PBcRplusDovetail_5573:HG2_PB_SVrefine2PB10Xhap12_1414:HG2_PB_SVrefine2Falcon2Bionano_666:HG4_PB_SVrefine2PBcRDovetail_962:HG4_PB_SVrefine2Falcon1Dovetail_1131:HG3_PB_SVrefine2Falcon1Dovetail_1116:HG3_PB_pbsv_1786:HG2_Ill_breakscan11_3150:HG2_PB_PB10Xdip_17358;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_666:HG2_PB_SVrefine2PB10Xhap12_1414:HG2_PB_SVrefine2PBcRplusDovetail_5573;NumExactMatchSVs=3;ClusterMaxShiftDist=0.124031;ClusterMaxSizeDiff=0.124031;ClusterMaxEditDist=0.228482;PBcalls=17;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=322;DistBack=12130;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:31952197-31952210;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2771.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:86:1/1:0:33:0:21:1/1:0:8:0:6:1/1:0:28:1/1:1:53:.:.:.
chr2	32046160	HG3_PB_SVrefine2PBcRDovetail_971	C	CCATGATCCAATCAATCCCACCAGGTCCTACCTCCAATACTACGGACTACAATTCAACATGAAATTTGGGCTGGGACACATATCCAAACTATATCACTGTCTTTTCCCTAATCTATGTTCTTGACAACTGTGTCAAAAATGAGTTCATTGTAGGTATATGAATTAGTTTCTGGGTTGTCTTTGCTGTTCCATTGGTCTATGTGTCTATTTTTATGCCAGTACCATGTTGTTTTGGTGACTATAGTTTTAGAATATAATTTGACGTCAGGTAATGTGATTCCTCCAGTTTCATTCATTTTGCTCAGGATAGTTTTGGCTATTGTAGGACTTCTGCAATTCCATGTAAAGGTTAGGATTGTTTATTCTATTTCTGTGAAGAATGTCACTGGGCTTTTGATAGGGAGTGCATTGAGTCTGCAGACTGCTTTGGCTAGTATGGACATTTTAACAATATTGATTCTTCCAATCCATGAACATGGAATATCTTTCCATTTGTCTGTGTCCTCTTCAATTTATTTCATCAGTGTTATATAGTTTTTGTTTTTGTTTTTTGAGATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTAATCTTGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAACCTCCCCAGTAGCTGGGACTACAGGCAGGCACCACCAAGTCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGGTGGTCTCGAACTCCTGACTTCAGGTGATCCACCTGCCTCAACCTCCCAAAGTGCTGTGATTACAGGAATGAGCCACCATGCCTAGCCAGTGTTATATAGTTTTAACTGTAGAGATCTTTCACTTATTTGGTTAAGTTCATTCCTAAGTATTTAACTTTATTCATAGCTATTGTAAATGGGATTAATTTCTTGATTTCTTTTTCAGATTGTTTGCTATTGGCATATAGAAGTGCTACTGAATTTTATATAAATTTATGCTGTATGTTAATTTTGTATCCTGCAACTTTACTGAATTTGTTTATCAGTTCTAATAGGGTTTTTTGGTGGAGTATTTAAGTTTTTCCATATATAAGATTATATCATCTGCAAACAAGGATAATTTGGCTTTTTCCATTCCAATTTGGATACCCTTTATTTCTTTCTCTTGTCTAATTGCTCTGGCTAAGATTTCCAGTACTATGTTGAAGAATAGTGATGAAAGTGGGCAAACTTGTCATGTTCCACATCTAAGAGGAAAGGCTTT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3151:HG2_PB_pbsv_1800:HG3_PB_pbsv_1787:HG4_PB_SVrefine2PBcRDovetail_963:HG4_PB_SVrefine2Falcon1Dovetail_1132:HG4_Ill_SVrefine2DISCOVARDovetail_1237:HG4_Ill_MetaSV_2556:HG4_Ill_GATKHCSBGrefine_1175:HG3_PB_SVrefine2PBcRDovetail_971:HG3_Ill_SVrefine2DISCOVARDovetail_1210:HG3_Ill_MetaSV_2613:HG3_Ill_GATKHCSBGrefine_1149:HG2_PB_SVrefine2PBcRplusDovetail_5574:HG2_PB_SVrefine2PB10Xhap12_1415:HG2_PB_SVrefine2Falcon2Bionano_667:HG2_Ill_SVrefine2DISCOVARplusDovetail_6452:HG2_Ill_MetaSV_2475:HG2_Ill_GATKHCSBGrefine_1139:HG2_10X_SVrefine210Xhap12_1361:HG2_PB_SVrefine2Falcon1plusDovetail_6041:HG3_PB_SVrefine2Falcon1Dovetail_1117:HG4_PB_HySA_2647:HG2_PB_PB10Xdip_17359;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1361:HG2_Ill_GATKHCSBGrefine_1139:HG2_Ill_MetaSV_2475:HG2_Ill_SVrefine2DISCOVARplusDovetail_6452:HG2_PB_SVrefine2Falcon2Bionano_667:HG2_PB_SVrefine2PB10Xhap12_1415:HG2_PB_SVrefine2PBcRplusDovetail_5574:HG3_Ill_GATKHCSBGrefine_1149:HG3_Ill_MetaSV_2613:HG3_Ill_SVrefine2DISCOVARDovetail_1210:HG3_PB_SVrefine2PBcRDovetail_971:HG4_Ill_GATKHCSBGrefine_1175:HG4_Ill_MetaSV_2556:HG4_Ill_SVrefine2DISCOVARDovetail_1237:HG4_PB_SVrefine2Falcon1Dovetail_1132:HG4_PB_SVrefine2PBcRDovetail_963;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0454721;ClusterMaxSizeDiff=0.0439306;ClusterMaxEditDist=0.143957;PBcalls=12;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1269;DistBack=11460;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:32046161-32046162;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2772.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:121:1/1:0:28:0:24:1/1:0:8:0:11:1/1:0:48:1/1:5:199:.:3335:.
chr2	32048478	HG2_PB_SVrefine2Falcon2Bionano_668	C	CATCAGCAGCAAGGCGGGCATTGTCAATCTGCAGAACGATGTGGGCATTATCCACAGTATTTGCGAAGATCTGGGCCCTCAGGTCCTCCATAGTCTTGAAGTAATGGCTCCAGTCTCTGTCCGGGGATCCCTTCTTCTCCAGGTGCTCCCGGATTTTGCTCTCCAGCCTCCAGTTCTCATTCTCCAGCCTCCTCACTCTGTCCAGGTAGGAGGGCAGGCAGTCGTTCAGGCTTTGTATGGTCTCCTTCTCGTTCTGGATGCCTCCCATTCCTGCCAGACCCCCGGCCATCCCCGTGCCCAGGCCCCCGGAACATCATGCCGTCCCGGAAGCTGGTGGAGCAGGACATAGAGATCCGGGAACGAGAGCCCCCGGCACATGCATAGACTCTGGCCGAGCTGCTGACCTGCCAGGTGCCGTAGCTGGGCGCCTGGACAGAGTCTAGGGACCGGTAGTTGGTGGAGAAGGTGGAGCGAGTGATGAAGCTCATGCTGTCTGGGGAACAGAGTGAGAGGACAGGACTCAGGCTTCGCCAACGACCTGCTTCAACTTTTGTTATTTGTTTTCTTCTACTAATTTTGATTTGGTTTGCTCTTGCTTTTCTATTCCTTAAAATGAATCATTAGATTATTTATCTGAAGTTTTTCTTCTTTTTTGATGTGGTCACTTATAGCTATAAGTTTCCCTCTTTGTACTGCTTTCACTGTATCCCAAAGGTTTTGGTATGCTTCCATTATCATTTATTCCAATAAATTTTTCAATTTCCTTCTTAATTTCTTCATTGACCCACTGGTCATTCAGGAGCATATTGCTGAATTTCCATGTGTTTGTATAGTTTTTTTACATATTTTATTGATTTAGGGGCCCAACAAGGCAGCATTTGGTCTTAAGAAAGGCACCTCATTGAAAATAATACATCACAGTGCTGTTGAGTGATCCCAGTCACAAGATTTGAGAACGGAAAGGACAATCTTTGGATGACATAGCTTAGGACAGTTGCTCATTTATTTAAAAGAGTCCCTTCACACACTGCAGATAAAAGAAGGCAAGAGCATAGGGTTGTGGCATGTGCTGGATAGCTGTGAGAGGTTACTCATGAGAGTAGGTAGCCTAGTAAATTAGTGGTAAGTCAGGGGAAGGGAATCAGCCTCCCTTTCCATTTCATTCCCTTCCCCCTCCCCTTGATTTCAGTTTGCTTGATTTGTTGAGCCACCATCCCTATGAATACACCTTACATCTCTTTCAAATGTGGAGATGGTTTTTTGATCTTACAGTATGTGGAACCAGGGTAAGTAATCAAAGCCTCCCTGTTCCAAGCTATAGACAGACAGGACAACAATTCGATTTCCTGTACTCTTGGTCTGGAACCCATGGAGTTCTGAGTTAAAAGCTGAGGTCTCAGAGCACTGGCTTTAAAAAATATTTTCACCAGTCCAGAGTAAATGAAAACCCAATTCCTTAGAAATAATATTGTATCTCTGTATTTCTACCCCCACCCTCCAAGCATGGTGTTTTTTAAAAAATTAATTTTTCCCTTACTTTAAAAACTCCCACCTATGTATAAAAGAAACTGCCACACTACAATAACACTGCTGTTGTTCCAGGTATTCCTCTGAGCCCCTCACCAGCCCTCCCTCACCATCCTCACCCTGACCACCCTTCCCTTCTGCCCAGCACCTAAGAGCAGGGATCACGCGGTGGGGTGATAAGCAGTGGTGCAGTCTCGCCTGGCCTTCTGATACTAGGATGTGGCTTTGGAGAAGGCTGCTAGGGTGCTTGCGAACACGACATCAGGGGTCTGGGATGCATCAATGGCAGAGTGGATCTCCCGTTTCCTGAAGTACTCTATGAGTGGGGTAGTTTGAGTGTCGTAGGCTTGCAGGCGGATTTTCAAGGCGTTTTCATTATCATCTGATCGACGAATCAAGGGTTCCCCGGTGATGTCATCTTTCATGGGCTCTTTTGGAGGGTTGAACTCCTCGTGGTAGGAACGGCCACTCTTGGGGTGAATCAGCCTTCCTGTGATTCTTCGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3152:HG3_PB_pbsv_1788:HG4_PB_assemblyticsfalcon_13136:HG4_PB_SVrefine2Falcon1Dovetail_1133:HG2_PB_pbsv_1801:HG3_PB_SVrefine2PBcRDovetail_972:HG4_PB_SVrefine2PBcRDovetail_964:HG2_PB_SVrefine2PBcRplusDovetail_5575:HG2_PB_SVrefine2PB10Xhap12_1416:HG2_PB_SVrefine2Falcon2Bionano_668:HG4_Ill_SVrefine2DISCOVARDovetail_1238:HG2_Ill_SVrefine2DISCOVARplusDovetail_6453:HG2_10X_SVrefine210Xhap12_1362:HG3_Ill_SVrefine2DISCOVARDovetail_1211:HG3_PB_SVrefine2Falcon1Dovetail_1118:HG2_PB_SVrefine2Falcon1plusDovetail_6042:HG4_PB_HySA_2648:HG2_PB_PB10Xdip_17360;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_668:HG2_PB_SVrefine2PB10Xhap12_1416:HG2_PB_SVrefine2PBcRplusDovetail_5575;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0548145;ClusterMaxSizeDiff=0.0432354;ClusterMaxEditDist=0.229117;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=2030;DistBack=2315;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=2:32048479-32048486;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9995;PctRecOverlap=0.999;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2773.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:88:1/1:0:10:0:5:./.:0:5:0:1:1/1:0:29:1/1:5:346:.:3335:.
chr2	34017652	HG4_Ill_GATKHCSBGrefine_1183	C	CCTCCTGCCATTCTCCAAAAAGCACCTGTGTGGCCACCTCCTCCATTTGTGACTTCCCTTCA	20	PASS	ClusterIDs=HG4_PB_HySA_2657:HG4_PB_pbsv_1805:HG2_PB_HySA_3334:HG4_Ill_GATKHC_2779:HG4_Ill_GATKHCSBGrefine_1183:HG2_Ill_GATKHC_2782:HG2_Ill_GATKHCSBGrefine_1144:HG4_Ill_svaba_2150:HG2_PB_pbsv_1805:HG2_Ill_svaba_2126:HG4_Ill_Krunchall_2402:HG4_Ill_250bpfermikitraw_2269:HG2_Ill_Krunchall_2301:HG2_Ill_250bpfermikitraw_2272;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1144:HG2_Ill_GATKHC_2782:HG4_Ill_GATKHCSBGrefine_1183:HG4_Ill_GATKHC_2779;NumExactMatchSVs=4;ClusterMaxShiftDist=0.164179;ClusterMaxSizeDiff=0.149254;ClusterMaxEditDist=0.302158;PBcalls=4;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=16646;DistForward=7171;DistMin=7171;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:34017651-34017653;PctSeqSimilarity=0.9612;PctSizeSimilarity=0.9531;PctRecOverlap=0.9385;SizeDiff=-3;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=95;MatchId=2774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:0|1:25:2:2:29:./.:16:0:6:20:0/1:26:24:./.:.:.:.:.:.
chr2	35117081	HG2_PB_SVrefine2PB10Xhap12_1423	T	TTATTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCAGCTGGAGTGCAGTGCGGATCTCGCTCACTGCAAGCTCCGCCTCCCGGTTCACGCCATTCTCCGCCTCAGCCTCCCAGTAGCTGGACTACAGGCCCGCCACTACCCCGGCTATCTTTTGTATTTTAGTAGAAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_673:HG2_PB_HySA_3354:HG4_PB_pbsv_1812:HG2_PB_pbsv_1812:HG2_PB_PB10Xdip_17411:HG2_PB_SVrefine2PB10Xhap12_1423:HG2_Ill_MetaSV_2478;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1423;NumExactMatchSVs=1;ClusterMaxShiftDist=0.177986;ClusterMaxSizeDiff=0.173302;ClusterMaxEditDist=0.229508;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=195;DistBack=8081;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:35117082-35117096;PctSeqSimilarity=0.9469;PctSizeSimilarity=0.8986;PctRecOverlap=0.8986;SizeDiff=-22;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=91;MatchId=2775.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:31:./.:12:7:5:9:0|1:14:0:1:6:0/1:25:4:./.:.:.:.:.:.
chr2	36517798	HG2_Ill_GATKHCSBGrefine_1159	A	AGTAATAACTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5590:HG2_PB_pbsv_1822:HG3_PB_pbsv_1801:HG2_PB_PB10Xdip_17421:HG3_PB_assemblyticsfalcon_13395:HG2_PB_assemblyticsPBcR_12921:HG2_Ill_breakscan11_3153:HG2_PB_SVrefine2PB10Xhap12_1430:HG3_Ill_MetaSV_2620:HG3_Ill_GATKHCSBGrefine_1159:HG2_PB_SVrefine2Falcon2Bionano_678:HG2_Ill_manta_488:HG2_Ill_GATKHCSBGrefine_1159:HG3_PB_SVrefine2Falcon1Dovetail_1131:HG2_PB_SVrefine2Falcon1plusDovetail_6052;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1159:HG2_Ill_manta_488:HG2_PB_SVrefine2Falcon2Bionano_678:HG3_Ill_GATKHCSBGrefine_1159:HG3_Ill_MetaSV_2620;NumExactMatchSVs=5;ClusterMaxShiftDist=0.172007;ClusterMaxSizeDiff=0.172007;ClusterMaxEditDist=0.206081;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=308;DistBack=80912;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:36517799-36517812;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:48:1|0:4:27:14:3:1|0:0:11:22:0:0/1:34:16:0/1:7:31:.:.:.
chr2	36570238	HG2_PB_SVrefine2PBcRplusDovetail_5591	A	ATCTTTGCACAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCACCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTACGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCAACTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAAGGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCAATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCACTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGACCGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCAAGAAATAGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6053:HG3_PB_HySA_2722:HG2_PB_PB10Xdip_17422:HG2_Ill_breakscan11_3154:HG2_PB_SVrefine2PB10Xhap12_1431:HG2_PB_SVrefine2PBcRplusDovetail_5591:HG3_PB_SVrefine2Falcon1Dovetail_1132;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5591;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0163747;ClusterMaxSizeDiff=0.0163747;ClusterMaxEditDist=0.036188;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=6073;DistBack=10073;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=2:36570239-36570276;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9997;PctRecOverlap=0.9992;SizeDiff=-2;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=2777.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:52:./.:17:25:5:12:./.:0:3:23:0:0/1:26:5:0/1:222:724:.:.:.
chr2	36831936	HG2_10X_SVrefine210Xhap12_1377	A	ATCTCAGCTACTCGGGAGGCTGAGGCAGGAGAATCCCTTGAACCTGGAAGGCAGAGGTTGCAGTGAGCCAAGATTGCGCCATTGTACTCCAGCCTGGGCGACAGAGCTAGGCTCAGTCCAAAAAAAAAATTTTTTTTTTTTTTGAGACGGAGTCTTGCTGTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCACGCCATTCTCCTG	20	PASS	ClusterIDs=HG4_PB_pbsv_1826:HG3_PB_pbsv_1803:HG2_PB_pbsv_1824:HG3_PB_assemblyticsfalcon_13399:HG2_PB_assemblyticsPBcR_12924:HG2_PB_PB10Xdip_17425:HG2_PB_PB10Xdip_17426:HG4_PB_HySA_2693:HG4_PB_SVrefine2PBcRDovetail_974:HG4_Ill_SVrefine2DISCOVARDovetail_1263:HG4_Ill_MetaSV_2568:HG4_Ill_GATKHCSBGrefine_1196:HG2_PB_SVrefine2Falcon2Bionano_679:HG2_Ill_SVrefine2DISCOVARplusDovetail_6475:HG2_10X_SVrefine210Xhap12_1377:HG2_Ill_GATKHCSBGrefine_1160:HG2_PB_SVrefine2PBcRplusDovetail_5593:HG2_PB_SVrefine2PB10Xhap12_1433:HG4_PB_SVrefine2Falcon1Dovetail_1148:HG3_PB_SVrefine2Falcon1Dovetail_1134:HG2_Ill_MetaSV_2481:HG2_PB_SVrefine2Falcon1plusDovetail_6055:HG3_PB_SVrefine2PBcRDovetail_984:HG3_Ill_SVrefine2DISCOVARDovetail_1238:HG3_Ill_MetaSV_2621:HG3_Ill_GATKHCSBGrefine_1160:HG2_PB_HySA_3369;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1377:HG2_Ill_SVrefine2DISCOVARplusDovetail_6475:HG2_PB_SVrefine2Falcon2Bionano_679:HG4_Ill_GATKHCSBGrefine_1196:HG4_Ill_MetaSV_2568:HG4_Ill_SVrefine2DISCOVARDovetail_1263:HG4_PB_SVrefine2PBcRDovetail_974;NumExactMatchSVs=7;ClusterMaxShiftDist=0.108108;ClusterMaxSizeDiff=0.108108;ClusterMaxEditDist=0.196393;PBcalls=17;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=237;DistBack=64264;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=2:36831937-36831943;PctSeqSimilarity=0.9958;PctSizeSimilarity=0.9958;PctRecOverlap=0.9916;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2778.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:33:0:28:./.:0:4:1:4:1/1:0:37:./.:.:.:.:.:.
chr2	38913400	HG3_Ill_GATKHC_2930	T	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTCTTTCTCTCTTTCTC	20	PASS	ClusterIDs=HG3_PB_pbsv_1816:HG3_Ill_svaba_2252:HG3_Ill_Spiral_1865:HG3_Ill_Krunchall_2377:HG3_Ill_GATKHC_2930:HG3_Ill_GATKHCSBGrefine_1167:HG2_Ill_svaba_2187:HG2_Ill_Krunchall_2361:HG2_Ill_GATKHC_2858:HG2_Ill_GATKHCSBGrefine_1170:HG2_Ill_250bpfermikitraw_2332:HG2_Ill_150bpfermikitraw_2140:HG3_Ill_SVrefine2DISCOVARDovetail_1248:HG2_PB_pbsv_1838:HG2_10X_SVrefine210Xhap12_1383;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2140:HG2_Ill_250bpfermikitraw_2332:HG2_Ill_GATKHCSBGrefine_1170:HG2_Ill_GATKHC_2858:HG2_Ill_Krunchall_2361:HG2_Ill_svaba_2187:HG3_Ill_GATKHCSBGrefine_1167:HG3_Ill_GATKHC_2930:HG3_Ill_Krunchall_2377:HG3_Ill_Spiral_1865:HG3_Ill_svaba_2252;NumExactMatchSVs=11;ClusterMaxShiftDist=0.115702;ClusterMaxSizeDiff=0.115702;ClusterMaxEditDist=0.238095;PBcalls=2;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=56;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=2:38913363-38913420;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2779.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:27:0:1:28:./.:2:20:4:2:0/1:28:13:./.:.:.:.:.:.
chr2	39306295	HG2_Ill_SpiralSDKrefine_8382	A	ACAGTAATGCTTAAAAAGCAAAACTTGTAAACAACCAGAATGTCCATCAACATTAGAATGGAC	20	PASS	ClusterIDs=HG3_PB_pbsv_1819:HG2_PB_PB10Xdip_17436:HG2_PB_pbsv_1841:HG2_Ill_breakscan11_3157:HG4_PB_assemblyticsfalcon_13202:HG4_Ill_svaba_2214:HG4_Ill_Krunchall_2461:HG4_Ill_GATKHC_2855:HG4_Ill_GATKHCSBGrefine_1212:HG4_Ill_Cortex_1777:HG3_Ill_svaba_2253:HG3_Ill_manta_374:HG3_Ill_Spiral_1868:HG3_Ill_Krunchall_2380:HG3_Ill_GATKHC_2933:HG3_Ill_GATKHCSBGrefine_1169:HG3_Ill_Cortex_1825:HG3_Ill_150bpfermikitraw_2226:HG2_Ill_svaba_2188:HG2_Ill_manta_494:HG2_Ill_SpiralSDKrefine_8382:HG2_Ill_Krunchall_2364:HG2_Ill_GATKHC_2860:HG2_Ill_GATKHCSBGrefine_1173:HG2_Ill_Cortex_4242:HG2_Ill_250bpfermikitraw_2333:HG2_Ill_150bpfermikitraw_2141:HG2_PB_HySA_3401:HG4_PB_HySA_2708:HG3_PB_HySA_2751;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2141:HG2_Ill_250bpfermikitraw_2333:HG2_Ill_Cortex_4242:HG2_Ill_GATKHCSBGrefine_1173:HG2_Ill_GATKHC_2860:HG2_Ill_Krunchall_2364:HG2_Ill_SpiralSDKrefine_8382:HG2_Ill_manta_494:HG2_Ill_svaba_2188:HG3_Ill_150bpfermikitraw_2226:HG3_Ill_Cortex_1825:HG3_Ill_GATKHCSBGrefine_1169:HG3_Ill_GATKHC_2933:HG3_Ill_Krunchall_2380:HG3_Ill_Spiral_1868:HG3_Ill_manta_374:HG3_Ill_svaba_2253:HG4_Ill_Cortex_1777:HG4_Ill_GATKHCSBGrefine_1212:HG4_Ill_GATKHC_2855:HG4_Ill_Krunchall_2461:HG4_Ill_svaba_2214:HG4_PB_assemblyticsfalcon_13202;NumExactMatchSVs=23;ClusterMaxShiftDist=0.149254;ClusterMaxSizeDiff=0.149254;ClusterMaxEditDist=0.230216;PBcalls=7;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=50;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:39306296-39306297;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2780.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:42:1/1:1:12:1:11:1/1:0:27:0:18:1/1:0:24:./.:.:.:.:.:.
chr2	39315326	HG3_Ill_GATKHCSBGrefine_1170	T	TTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_2571:HG2_PB_pbsv_1842:HG4_PB_pbsv_1840:HG4_Ill_GATKHCSBGrefine_1213:HG3_PB_pbsv_1820:HG4_PB_assemblyticsfalcon_13203:HG3_Ill_GATKHCSBGrefine_1170:HG2_Ill_GATKHCSBGrefine_1174:HG3_PB_HySA_2752:HG2_PB_SVrefine2Falcon1plusDovetail_6061:HG4_PB_HySA_2709:HG2_PB_HySA_3402:HG4_PB_SVrefine2PBcRDovetail_980:HG3_PB_SVrefine2PBcRDovetail_990:HG2_PB_SVrefine2Falcon2Bionano_687:HG3_PB_SVrefine2Falcon1Dovetail_1140:HG2_PB_SVrefine2PBcRplusDovetail_5599:HG2_PB_SVrefine2PB10Xhap12_1444:HG2_10X_SVrefine210Xhap12_1387:HG2_PB_PB10Xdip_17437:HG3_Ill_MetaSV_2624;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1174:HG3_Ill_GATKHCSBGrefine_1170:HG4_Ill_GATKHCSBGrefine_1213;NumExactMatchSVs=3;ClusterMaxShiftDist=0.125196;ClusterMaxSizeDiff=0.125196;ClusterMaxEditDist=0.219092;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=305;DistBack=9030;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:39315327-39315326;PctSeqSimilarity=0.9794;PctSizeSimilarity=0.9591;PctRecOverlap=0.9561;SizeDiff=-13;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=96;MatchId=2781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:./.:0:4:0:5:./.:1:2:5:4:0/1:5:11:0/1:11:57:.:.:.
chr2	40424955	HG3_Ill_250bpfermikitraw_2334	T	TAGGATCTATTGACAAAGCTCCAGAGTGGTAGTATCTGTGAGGTTCAAGAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1390:HG2_PB_pbsv_1845:HG3_PB_HySA_2763:HG2_PB_HySA_3409:HG3_Ill_svaba_2261:HG3_Ill_Krunchall_2389:HG3_Ill_GATKHC_2944:HG3_Ill_GATKHCSBGrefine_1175:HG3_Ill_250bpfermikitraw_2334:HG3_Ill_150bpfermikitraw_2233:HG2_Ill_svaba_2195:HG2_Ill_Krunchall_2371:HG2_Ill_GATKHC_2870:HG2_Ill_GATKHCSBGrefine_1177:HG2_Ill_250bpfermikitraw_2343:HG2_Ill_150bpfermikitraw_2147:HG3_PB_pbsv_1823:HG3_PB_SVrefine2PBcRDovetail_993:HG3_Ill_SVrefine2DISCOVARDovetail_1258;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2147:HG2_Ill_250bpfermikitraw_2343:HG2_Ill_GATKHCSBGrefine_1177:HG2_Ill_GATKHC_2870:HG2_Ill_Krunchall_2371:HG2_Ill_svaba_2195:HG3_Ill_150bpfermikitraw_2233:HG3_Ill_250bpfermikitraw_2334:HG3_Ill_GATKHCSBGrefine_1175:HG3_Ill_GATKHC_2944:HG3_Ill_Krunchall_2389:HG3_Ill_svaba_2261;NumExactMatchSVs=12;ClusterMaxShiftDist=0.237624;ClusterMaxSizeDiff=0.217822;ClusterMaxEditDist=0.32;PBcalls=5;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=50;DistBack=65956;DistForward=2356;DistMin=2356;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=2:40424927-40425028;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:28:./.:16:19:20:4:./.:4:12:13:0:0/1:21:13:./.:.:.:.:.:.
chr2	40613681	HG2_PB_pbsv_1849	A	AAACGGGGTAATGGCGGGCGCTGTTGGCTCACGCCTGATCCCAGCACTTTTGGGAGCCGAGGCTGGGTGGATCATGAGTCAGGAGATCGAGACCATCCTGGCTTAACAAGGTGAAACCCCGTCCTCTACTAAAAATACAAAAATTAGCGCGGGCGCTACACAGTGGCGGGCGCCTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGCGTGAACCCGGGGAAGCGGAGCTTGCAGTTGAGCCGAGATTGCGCCCCTGCAGTCCGCCAGTCTGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3158:HG3_PB_pbsv_1827:HG4_PB_assemblyticsfalcon_13208:HG2_PB_pbsv_1849:HG4_PB_SVrefine2PBcRDovetail_982:HG3_PB_SVrefine2Falcon1Dovetail_1142:HG4_PB_HySA_2722:HG4_PB_pbsv_1847;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_1849;NumExactMatchSVs=1;ClusterMaxShiftDist=0.145185;ClusterMaxSizeDiff=0.145185;ClusterMaxEditDist=0.200295;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=350;DistBack=6;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:40613682-40613681;PctSeqSimilarity=0.9562;PctSizeSimilarity=0.9714;PctRecOverlap=0.963;SizeDiff=10;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=96;MatchId=2783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:35:0|1:37:1:1:27:./.:45:0:4:2:0/1:29:4:0/1:19:8:.:.:.
chr2	41250940	HG4_Ill_250bpfermikitraw_2347	T	TCATATATATATATATATATATATATATATATATATATATATATATGAACATACGCACA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3159:HG3_PB_HySA_2772:HG4_PB_pbsv_1849:HG2_PB_pbsv_1851:HG2_PB_HySA_3424:HG2_PB_HySA_3423:HG3_Ill_manta_381:HG3_PB_SVrefine2PBcRDovetail_996:HG4_Ill_manta_435:HG4_Ill_GATKHC_2877:HG4_Ill_GATKHCSBGrefine_1220:HG4_Ill_250bpfermikitraw_2347:HG4_Ill_150bpfermikitraw_2271:HG2_PB_SVrefine2Falcon1plusDovetail_6066:HG2_Ill_Krunchall_2380:HG2_Ill_GATKHC_2881:HG2_Ill_GATKHCSBGrefine_1182:HG2_Ill_250bpfermikitraw_2352:HG2_Ill_150bpfermikitraw_2158:HG3_Ill_Spiral_1880:HG3_Ill_SVrefine2DISCOVARDovetail_1267:HG3_Ill_GATKHC_2955:HG3_Ill_GATKHCSBGrefine_1180:HG3_Ill_250bpfermikitraw_2344:HG3_Ill_150bpfermikitraw_2244:HG4_PB_HySA_2728:HG3_PB_pbsv_1830;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2158:HG2_Ill_250bpfermikitraw_2352:HG2_Ill_GATKHCSBGrefine_1182:HG2_Ill_GATKHC_2881:HG2_Ill_Krunchall_2380:HG2_PB_SVrefine2Falcon1plusDovetail_6066:HG4_Ill_150bpfermikitraw_2271:HG4_Ill_250bpfermikitraw_2347:HG4_Ill_GATKHCSBGrefine_1220:HG4_Ill_GATKHC_2877:HG4_Ill_manta_435;NumExactMatchSVs=11;ClusterMaxShiftDist=0.176;ClusterMaxSizeDiff=0.176;ClusterMaxEditDist=0.235294;PBcalls=9;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=4654;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=2:41250941-41250946;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:./.:14:4:10:21:./.:28:0:1:10:0/1:31:21:./.:.:.:.:.:.
chr2	41732844	HG2_10X_SVrefine210Xhap12_1393	G	GCAATTTGCATATCCTTAAGAAAACATTACTGGGATCTCTGTGACAGGAAGCTAAAGGGATTTGAGCCCTTGGTGGCTTAACAACTGAATTATGAATCGGATGGAGGGACTAGTTCATTCACTCTCTTAAAGGACTATAACCTTTGTCTTTTCTATTTAAATAAGTTTATGTCTGAAGACCAATTTATTTATTTCAAAAATATTTAAAACTATGCAAAACATAATAAATCCACATATTAAAGAGAACCAAAGGCTGGAGCCAGACGGCTTCTCTAGGGATTACAAGGAGACCACAGAAATGGCTTTACTACTCCAAGCCTTCTACCCCTACCCACCTCCCCAGTCACTGAGAATGGAGGCTGCAGAAAGGTGAAAACAGAAAGGAGAGGTTACAGTTCTTTTCTCCTATCCCATCCTCAGCCAATATCACAAGCCTTGTAAGAAGGGAAACTGCAAGGGAGTCACTGTAAGGTAGGAGGAGACCATTTTTCCAATCAGTAGCAAGACTGTGACCAAGGAAGGGGATAGTGACCTACCCCTGCACCTATAAGAGGAGAAAAGGGAACTGGGGAATGATGGCAAGCAGTGGGAGAGGGAGGGATGCCCAACAAGCAAACAGTCTTCGTTTCCACCATCTAGTGTGCTCAGGATTGTGAGTTTCCTATAGGTTAAATAGACAGCATGGAAGGTAGCTGGGCTGTAGCCATTTTGCTAGTAACACCCTAAAAAATGCTGCCACTGAGTGGAAACACACACACATGCCCGCACAAGCACACATATATACATATAAACACAGGTGCAAGAAGCCATGGACTGAATGCCAGTGGATACAATTTACAGTGAAAGATTGGGTAGAAGAGACGGAGTTGAAGTCACGTCAGGCAAGGTAGAAAGCTGAGCAGTAAAAAGTCCCCATATCTCCCCACAGCCCTTGTCCCCACCTGAGAACTCACACATGTGCACTATGAAAGGGTCAACATGTGGATACTGGCTATGCAGACGGTGTAGACAACTAGTCCTTGTTAGCCAGAGAAGCAGCAGTGAACAAAATGAAGGAAACTACAATCTTGTAACTGTGGTCTCGTGTACAAAGAAACCCTCTTGCTCCTTCCCATCATAACACTATGGGGAGCTACAGCCTAGCATGGAGGGGAGAGGAGGTGCAGAGCTCTGAATGAGATTTAAATTGGATAAAATATTTAGAAACTGAAAGTGACCAGGAAGTTACATGATATGCCCAAGTTCTATTAAGGAACAGGAAACGGATAGTCAGAAGGTCATAGTTGATATGTGCTACATTTTATGGTGAGCTTGAGTAAATATATTACTTGCAACAAAATCTTTACTCTTTTAAAATCTTAGGACTTGCTTATAAAAAATACAAAATCATTTGTAAAAAAGGAAGAAGAGTCTAGTTGAAGAAAATAGTCATCATCGTTTCATGTTTGTATTGGCAAAACAATGATATTGTTCAATGAATCATTTATCCCACTTTATTCTTAGTTGAACACTTTCATCACAGTGACAATGAAGAACACAATAATAATAAAACAATACTAAAGCCCCTATTACTTTTTTGTGGGTCAGCAGGGGCTCATTTTATACTTAAGTATTCTTGAGGATTACTCTTCAATTTTTCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1155:HG2_PB_pbsv_1852:HG4_PB_pbsv_1850:HG2_PB_PB10Xdip_17440:HG2_PB_PB10Xdip_17439:HG4_PB_SVrefine2PBcRDovetail_983:HG4_Ill_SVrefine2DISCOVARDovetail_1281:HG3_PB_SVrefine2PBcRDovetail_997:HG2_PB_SVrefine2PBcRplusDovetail_5603:HG2_PB_SVrefine2PB10Xhap12_1447:HG2_PB_SVrefine2Falcon2Bionano_691:HG2_Ill_SVrefine2DISCOVARplusDovetail_6493:HG2_10X_SVrefine210Xhap12_1393:HG2_PB_SVrefine2Falcon1plusDovetail_6067:HG3_PB_SVrefine2Falcon1Dovetail_1144;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1393:HG2_Ill_SVrefine2DISCOVARplusDovetail_6493:HG2_PB_SVrefine2Falcon2Bionano_691:HG2_PB_SVrefine2PB10Xhap12_1447:HG2_PB_SVrefine2PBcRplusDovetail_5603:HG3_PB_SVrefine2PBcRDovetail_997:HG4_Ill_SVrefine2DISCOVARDovetail_1281;NumExactMatchSVs=7;ClusterMaxShiftDist=0.057041;ClusterMaxSizeDiff=0.057041;ClusterMaxEditDist=0.178224;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=1639;DistBack=88683;DistForward=228;DistMin=228;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=224;REFWIDENED=2:41732845-41733068;PctSeqSimilarity=0.998;PctSizeSimilarity=0.9994;PctRecOverlap=0.9274;SizeDiff=1;StartDistance=-119;EndDistance=-119;GTMatch=0;TruScore=97;MatchId=2785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:82:./.:7:10:0:11:1/1:0:9:0:13:1/1:0:33:./.:16:192:5348:1654:.
chr2	43024067	HG2_PB_SVrefine2Falcon1plusDovetail_6072	G	GCATTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAACTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6071:HG4_PB_pbsv_1856:HG2_PB_pbsv_1858:HG4_PB_HySA_2736:HG4_PB_assemblyticsfalcon_13224:HG3_PB_assemblyticsfalcon_13458:HG2_PB_SVrefine2PB10Xhap12_1454:HG2_PB_HySA_3437:HG2_PB_PB10Xdip_17449:HG2_PB_PB10Xdip_17448:HG3_PB_SVrefine2Falcon1Dovetail_1146:HG2_PB_SVrefine2Falcon2Bionano_696:HG2_PB_SVrefine2Falcon1plusDovetail_6072:HG2_PB_SVrefine2PB10Xhap12_1453:HG2_Ill_breakscan11_3160;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6072;NumExactMatchSVs=1;ClusterMaxShiftDist=0.185886;ClusterMaxSizeDiff=0.182444;ClusterMaxEditDist=0.227586;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=305;DistBack=62456;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=2:43024068-43024076;PctSeqSimilarity=0.9951;PctSizeSimilarity=0.9903;PctRecOverlap=0.9871;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2786.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:44:0|1:26:0:2:32:0|1:20:0:0:5:0/1:27:12:0/1:4:18:.:.:.
chr2	43410716	HG4_Ill_scalpel_1638	C	CGCGCCATTGCACTCCAGCCCAGGCAACAAGAGCGAAACTCCATCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_1858:HG3_Ill_Spiral_1900:HG2_PB_PB10Xdip_17467:HG2_PB_PB10Xdip_17466:HG4_Ill_GATKHC_2901:HG4_Ill_GATKHCSBGrefine_1227:HG3_Ill_GATKHC_2985:HG3_Ill_GATKHCSBGrefine_1190:HG2_Ill_GATKHC_2907:HG2_Ill_GATKHCSBGrefine_1189:HG2_Ill_manta_501:HG4_Ill_svaba_2247:HG4_Ill_scalpel_1638:HG3_Ill_svaba_2293:HG3_Ill_scalpel_1817:HG3_Ill_150bpfermikitraw_2267:HG2_Ill_svaba_2220:HG2_Ill_scalpel_1696:HG2_Ill_Krunchall_2400:HG2_Ill_250bpfermikitraw_2372:HG4_PB_HySA_2740:HG3_PB_pbsv_1841:HG2_PB_HySA_3441:HG2_PB_pbsv_1859;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2372:HG2_Ill_Krunchall_2400:HG2_Ill_scalpel_1696:HG2_Ill_svaba_2220:HG3_Ill_150bpfermikitraw_2267:HG3_Ill_scalpel_1817:HG3_Ill_svaba_2293:HG4_Ill_scalpel_1638:HG4_Ill_svaba_2247;NumExactMatchSVs=9;ClusterMaxShiftDist=0.233333;ClusterMaxSizeDiff=0.211382;ClusterMaxEditDist=0.366667;PBcalls=7;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:43410715-43410717;PctSeqSimilarity=0.9851;PctSizeSimilarity=1;PctRecOverlap=0.9692;SizeDiff=0;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=98;MatchId=2787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:0:11:1:17:1/1:0:17:0:12:1/1:0:23:./.:.:.:.:.:.
chr2	44825835	HG4_Ill_GATKHCSBGrefine_1232	T	TAAAATCAGAAGTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_3449:HG4_PB_pbsv_1867:HG3_PB_pbsv_1851:HG4_PB_HySA_2749:HG4_PB_assemblyticsfalcon_13243:HG2_PB_pbsv_1867:HG2_Ill_breakscan11_3161:HG3_PB_HySA_2789:HG3_PB_SVrefine2Falcon1Dovetail_1153:HG3_Ill_MetaSV_2633:HG3_Ill_GATKHCSBGrefine_1194:HG4_PB_SVrefine2PBcRDovetail_992:HG4_Ill_MetaSV_2578:HG4_Ill_GATKHCSBGrefine_1232:HG2_Ill_MetaSV_2490:HG2_Ill_GATKHCSBGrefine_1194;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_2490:HG4_Ill_GATKHCSBGrefine_1232:HG4_Ill_MetaSV_2578;NumExactMatchSVs=3;ClusterMaxShiftDist=0.213465;ClusterMaxSizeDiff=0.213465;ClusterMaxEditDist=0.262458;PBcalls=9;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=9672;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:44825836-44825850;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:54:0|1:39:0:0:40:0|1:23:0:0:6:0/1:24:14:0/1:7:35:.:.:.
chr2	45323027	HG4_Ill_GATKHCSBGrefine_1233	G	GGGGCCAGTGTATTCCTAGCTGAGGCTGTGGGTATACACAGCAGGGAATGAAGAGGGCTCAGAATCCATGTTGGTGAAGTGACCATGCCAGCACAGGTAAGTGGGTGGGGACAGTGGTCTACTAGCCTGAGGCTGTGTGGTTT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6518:HG2_10X_SVrefine210Xhap12_1408:HG2_PB_pbsv_1868:HG3_PB_pbsv_1852:HG3_PB_HySA_2790:HG4_PB_pbsv_1868:HG2_PB_HySA_3452:HG4_Ill_GATKHC_2913:HG4_Ill_GATKHCSBGrefine_1233:HG3_Ill_GATKHC_2996:HG3_Ill_GATKHCSBGrefine_1195:HG2_Ill_GATKHC_2918:HG2_Ill_GATKHCSBGrefine_1195:HG4_PB_HySA_2750:HG4_PB_SVrefine2PBcRDovetail_993:HG4_Ill_SVrefine2DISCOVARDovetail_1306:HG3_PB_SVrefine2Falcon1Dovetail_1155:HG2_PB_SVrefine2Falcon2Bionano_699;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1195:HG2_Ill_GATKHC_2918:HG3_Ill_GATKHCSBGrefine_1195:HG3_Ill_GATKHC_2996:HG4_Ill_GATKHCSBGrefine_1233:HG4_Ill_GATKHC_2913;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0945946;ClusterMaxSizeDiff=0.0945946;ClusterMaxEditDist=0.214765;PBcalls=9;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=142;DistBack=53;DistForward=15853;DistMin=53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=141;REFWIDENED=2:45322953-45323093;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:./.:25:7:5:14:./.:6:16:9:0:0/1:32:14:./.:.:.:.:.:.
chr2	45338980	HG2_Ill_150bpfermikitraw_2184	G	GTAGAGAAGGCATTCCAGGTGAGGAGAGTTAAGTGAACAAGAGGCTGAGAGATC	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_13245:HG4_PB_pbsv_1869:HG2_PB_pbsv_1869:HG4_PB_HySA_2751:HG2_Ill_breakscan11_3162:HG4_Ill_svaba_2258:HG4_Ill_manta_440:HG4_Ill_Krunchall_2507:HG4_Ill_GATKHC_2914:HG4_Ill_GATKHCSBGrefine_1234:HG4_Ill_Cortex_1784:HG4_Ill_250bpfermikitraw_2379:HG4_Ill_150bpfermikitraw_2306:HG3_Ill_svaba_2304:HG3_Ill_manta_385:HG3_Ill_Spiral_1907:HG3_Ill_Krunchall_2438:HG3_Ill_GATKHC_2997:HG3_Ill_GATKHCSBGrefine_1196:HG3_Ill_Cortex_1836:HG3_Ill_250bpfermikitraw_2371:HG3_Ill_150bpfermikitraw_2276:HG2_Ill_svaba_2230:HG2_Ill_manta_503:HG2_Ill_SpiralSDKrefine_8415:HG2_Ill_Krunchall_2409:HG2_Ill_GATKHC_2919:HG2_Ill_GATKHCSBGrefine_1196:HG2_Ill_Cortex_4264:HG2_Ill_250bpfermikitraw_2380:HG2_Ill_150bpfermikitraw_2184:HG3_PB_HySA_2791;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2184:HG2_Ill_250bpfermikitraw_2380:HG2_Ill_Cortex_4264:HG2_Ill_GATKHCSBGrefine_1196:HG2_Ill_GATKHC_2919:HG2_Ill_Krunchall_2409:HG2_Ill_SpiralSDKrefine_8415:HG2_Ill_manta_503:HG2_Ill_svaba_2230:HG3_Ill_150bpfermikitraw_2276:HG3_Ill_250bpfermikitraw_2371:HG3_Ill_Cortex_1836:HG3_Ill_GATKHCSBGrefine_1196:HG3_Ill_GATKHC_2997:HG3_Ill_Krunchall_2438:HG3_Ill_Spiral_1907:HG3_Ill_manta_385:HG3_Ill_svaba_2304:HG4_Ill_150bpfermikitraw_2306:HG4_Ill_250bpfermikitraw_2379:HG4_Ill_Cortex_1784:HG4_Ill_GATKHCSBGrefine_1234:HG4_Ill_GATKHC_2914:HG4_Ill_Krunchall_2507:HG4_Ill_manta_440:HG4_Ill_svaba_2258;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0934579;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.165138;PBcalls=5;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=50;DistForward=47138;DistMin=50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:45338979-45338981;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2791.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:31:0|1:18:1:7:28:1|0:1:30:11:0:0/1:27:10:./.:.:.:.:.:.
chr2	45448840	HG4_Ill_150bpfermikitraw_2307	A	AAGAGAACAAGGCAGACAAGGTGACTTGGTGGCAGTGAGAACAACAGGGCAGTGCCAATGGAGACAGAAACCTGGGGAAGATATGGGACC	20	PASS	ClusterIDs=HG2_PB_pbsv_1870:HG4_Ill_SVrefine2DISCOVARDovetail_1308:HG2_PB_SVrefine2Falcon1plusDovetail_6076:HG2_10X_SVrefine210Xhap12_1409:HG4_PB_pbsv_1870:HG4_Ill_GATKHC_2915:HG4_Ill_GATKHCSBGrefine_1235:HG2_Ill_GATKHCSBGrefine_1197:HG4_Ill_Krunchall_2508:HG4_Ill_250bpfermikitraw_2380:HG4_Ill_150bpfermikitraw_2307:HG2_Ill_Krunchall_2410:HG2_Ill_250bpfermikitraw_2382;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2382:HG2_Ill_Krunchall_2410:HG4_Ill_150bpfermikitraw_2307:HG4_Ill_250bpfermikitraw_2380:HG4_Ill_Krunchall_2508;NumExactMatchSVs=5;ClusterMaxShiftDist=0.142077;ClusterMaxSizeDiff=0.142077;ClusterMaxEditDist=0.222222;PBcalls=3;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=89;DistBack=34579;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=2:45448841-45448841;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2792.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:38:./.:16:17:18:12:0|1:22:0:1:40:0/1:28:29:./.:.:.:.:.:.
chr2	46196184	HG3_PB_HySA_2796	T	TAAAAATATTCATTGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_HySA_2796:HG2_PB_HySA_3461:HG2_PB_pbsv_1873:HG3_PB_SVrefine2PBcRDovetail_1005:HG3_PB_pbsv_1854:HG2_PB_SVrefine2Falcon1plusDovetail_6079;NumClusterSVs=6;ExactMatchIDs=HG3_PB_HySA_2796;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0896861;ClusterMaxSizeDiff=0.0892857;ClusterMaxEditDist=0.211731;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=337;DistBack=10227;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:46196185-46196199;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2794.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:39:0|1:35:0:0:35:1|0:1:6:18:0:0/1:22:6:0/1:11:43:.:.:.
chr2	46928954	HG2_PB_pbsv_1877	A	ATTTTTTTTTTTTTTTCTTTTTTGAGAACGGGTCTCGCTGTGCTGTCGCCCAGGCTATGGAGTGCAGTGGCGGGATCATCGGCTCACTGCAAGCCTCCGCCTCCCGGGTTCAACGCCATTCCCCGCCTCAGCGCTCCCAAGAGCTGGGACTGCAGCGCCCGCCACTACGCCCGGCTAAATTTTTTGTATTTTAAGTAAAGAGACGGGGTTTCAACCGTTTTAGCCGGGATGGGTCTCGATCTCCCATGACCTCGTGAATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGATTAAGGGCGTGAGCCTTT	20	PASS	ClusterIDs=HG4_PB_pbsv_1875:HG4_PB_assemblyticsfalcon_13254:HG2_PB_pbsv_1877:HG3_PB_assemblyticsfalcon_13489:HG4_PB_HySA_2759:HG3_PB_SVrefine2Falcon1Dovetail_1161:HG2_Ill_MetaSV_2493:HG4_PB_SVrefine2Falcon1Dovetail_1159:HG4_Ill_MetaSV_2580:HG2_PB_SVrefine2Falcon1plusDovetail_6082;NumClusterSVs=10;ExactMatchIDs=HG2_PB_pbsv_1877;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0855263;ClusterMaxSizeDiff=0.0789474;ClusterMaxEditDist=0.253612;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=306;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=2:46928955-46928955;PctSeqSimilarity=0.9509;PctSizeSimilarity=0.9641;PctRecOverlap=0.9609;SizeDiff=11;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=95;MatchId=2795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:28:./.:23:3:7:13:0|1:13:0:0:5:0/1:40:6:0/1:9:8:.:.:.
chr2	47119859	HG2_Ill_manta_506	G	GCCGTCAATGGCCATGCCCCATCCTGTCCTCTTGGGCTGTACCCTCAGCTGGGGGCAGGGGACCCTCAGCCTGC	20	PASS	ClusterIDs=HG4_PB_pbsv_1879:HG3_PB_pbsv_1860:HG2_PB_pbsv_1881:HG2_PB_HySA_3473:HG3_PB_HySA_2801:HG4_Ill_svaba_2268:HG4_Ill_scalpel_1655:HG4_Ill_manta_443:HG4_Ill_Krunchall_2524:HG4_Ill_GATKHC_2929:HG4_Ill_GATKHCSBGrefine_1244:HG4_Ill_Cortex_1786:HG4_Ill_250bpfermikitraw_2395:HG4_Ill_150bpfermikitraw_2323:HG3_Ill_svaba_2317:HG3_Ill_manta_387:HG3_Ill_Spiral_1914:HG3_Ill_Krunchall_2452:HG3_Ill_GATKHCSBGrefine_1204:HG3_Ill_Cortex_1838:HG3_Ill_250bpfermikitraw_2385:HG3_Ill_150bpfermikitraw_2290:HG2_PB_assemblyticsPBcR_13017:HG2_Ill_svaba_2240:HG2_Ill_manta_506:HG2_Ill_Krunchall_2423:HG2_Ill_GATKHC_2938:HG2_Ill_GATKHCSBGrefine_1208:HG2_Ill_Cortex_4270:HG2_Ill_250bpfermikitraw_2397:HG4_PB_assemblyticsfalcon_13258:HG2_PB_PB10Xdip_17487:HG2_PB_PB10Xdip_17486;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2397:HG2_Ill_Cortex_4270:HG2_Ill_GATKHCSBGrefine_1208:HG2_Ill_GATKHC_2938:HG2_Ill_Krunchall_2423:HG2_Ill_manta_506:HG2_Ill_svaba_2240:HG2_PB_assemblyticsPBcR_13017:HG3_Ill_150bpfermikitraw_2290:HG3_Ill_250bpfermikitraw_2385:HG3_Ill_Cortex_1838:HG3_Ill_GATKHCSBGrefine_1204:HG3_Ill_Krunchall_2452:HG3_Ill_Spiral_1914:HG3_Ill_manta_387:HG3_Ill_svaba_2317:HG4_Ill_150bpfermikitraw_2323:HG4_Ill_250bpfermikitraw_2395:HG4_Ill_Cortex_1786:HG4_Ill_GATKHCSBGrefine_1244:HG4_Ill_GATKHC_2929:HG4_Ill_Krunchall_2524:HG4_Ill_manta_443:HG4_Ill_scalpel_1655:HG4_Ill_svaba_2268;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0533333;ClusterMaxEditDist=0.241611;PBcalls=9;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=73;DistBack=13082;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:47119858-47119860;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2796.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:65:1/1:3:22:2:40:1/1:0:21:1:17:1/1:0:62:./.:.:.:.:.:.
chr2	47319298	HG3_PB_pbsv_1862	T	TTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTGAGACAAAGTCTTTGTGCTCGCGCCAAGGTGGAGTGCAGTGGCGTGACCTCGCTCACTGCAAGCTCCGGCCTCCCGGGGTTCACGCCATTCTCCTGTCTTCAGCCTCCCAAGTAGCTGGACTACAGGCCACTCGCCACCACGCCCCGGCTAAATTTTTTGTATTTTGGTAGAGTGACGAGGTTTCACCGGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATTCCGCCCATCTCGGCCCTCCCAAAGTGCTGGGATTACAGGCGTTGAGCCACCGCGCCCGGAACCGCATGGTTCTAATTTTTCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6083:HG4_PB_pbsv_1881:HG3_PB_pbsv_1862:HG3_PB_HySA_2804:HG2_PB_pbsv_1883:HG2_PB_assemblyticsPBcR_13019:HG4_PB_assemblyticsfalcon_13260:HG3_PB_assemblyticsfalcon_13495:HG2_PB_HySA_3475:HG2_10X_SVrefine210Xhap12_1420:HG2_PB_SVrefine2Falcon2Bionano_704:HG2_PB_SVrefine2PBcRplusDovetail_5614:HG4_PB_SVrefine2PBcRDovetail_999:HG3_PB_SVrefine2Falcon1Dovetail_1162:HG4_PB_HySA_2762;NumClusterSVs=15;ExactMatchIDs=HG3_PB_pbsv_1862;NumExactMatchSVs=1;ClusterMaxShiftDist=0.14881;ClusterMaxSizeDiff=0.14881;ClusterMaxEditDist=0.208333;PBcalls=14;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=346;DistBack=13;DistForward=70011;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:47319299-47319298;PctSeqSimilarity=0.9479;PctSizeSimilarity=1;PctRecOverlap=0.9481;SizeDiff=0;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=96;MatchId=2797.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:66:./.:2:5:1:5:./.:1:4:1:3:0/1:5:8:0/1:3:14:.:.:.
chr2	47809988	HG2_PB_PB10Xdip_17488	T	TACAAAGTGCATTCTTTTTTTTTTTTTTTTTTTTTTTTTAGTTTCAACTGCTGATATTTTATTTTGATAGGTTATTTTTTTCTTTTTTTTTTTTTTTTTTTAATTTATTTATTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACAGAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCACCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGACGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCTGGGCGGGGGGCTGTCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCCGGCCGGAAGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGACCCCCCCCCCCACCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTTCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGACTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCAGGTGGGGGGATGACCCCCCACCTCCCTCCCGGGCGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGTCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGACCCCCCCCCCCGCCTCCCTCCCGGATGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCTGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGTTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGAGCGGCCGGGCAGAGACGCTCCCCACCTCCCAGACAGGGCTGCGGCCCAGCAGAGGTGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTCCTCGCTTCCCAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCATACGGGGTGGCGGCCAGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGCAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGCTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGTGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATCAGAGGGAGACCGTGGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGGGGGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGCAGGTTAATTTTTTTTCAAAACAACCATTGCCTTTTCCCCTTAAGAAATAAGTGGGAAGTGGCCGGGTGCGGTGGCTCACGCCTG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17488:HG2_PB_pbsv_1885:HG2_PB_HySA_3485:HG2_PB_assemblyticsPBcR_13024:HG3_PB_SVrefine2PBcRDovetail_1009:HG2_PB_SVrefine2PB10Xhap12_1468:HG2_PB_SVrefine2PBcRplusDovetail_5615:HG2_PB_SVrefine2Falcon1plusDovetail_6084:HG3_PB_HySA_2808:HG2_Ill_breakscan11_3163;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_17488;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0387367;ClusterMaxSizeDiff=0.0387367;ClusterMaxEditDist=0.123629;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=2883;DistBack=7989;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:47809989-47809988;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9948;PctRecOverlap=0.9945;SizeDiff=-15;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2798.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:38:./.:12:11:9:15:1|0:0:15:37:0:0/1:33:10:0/1:98:257:.:2824:.
chr2	47995845	HG2_PB_SVrefine2PB10Xhap12_1469	G	GTGGCTCACACCTGTAATCCCAGCACTTTGGGAAGCCTAGGTGGGCAGATCACAAGGTCAGGAGTTTGAGACCAGCCTGCACAACATAGCAAAACCCTGTCTCTACTAAAAATACGAAAATTAGCCTGGTGTGTTGGCATGCGCCTGTAGTCCCAGCTACCCGGGAAGCTGAGGCAGAAGAATCATTTGAATCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGATGCCATCTCCAAGAAAAAAAAAAAAAGAAAGAAAAAACAAAACACGAAGGGCAGTACCAGGAGGGAACTCATTATTAAAACCAGCCAGCGTGAGTCCCTTTCTGGGGTGGAAGACTGGTGTGAATTGGGTTGATCATACAGGGTCCACATGTACCCCTTCTGGGACACATTCCTTCCCCAGACTTTCACTGTGCCCCCCTGTGCCCCAGGATATTTCAAATTCTGAAGGTGTGAAGGTTGTGTAGGGGAGAAAAAGTGTATTTGCCTCACCCATCGTGAAGTTCATGCCTATAACAAAAGACATTAACTGGAGAAAAGCATCATAAATTTGTTTTTTTGTTTTTGTTTTTGTTTTTGAGACGGAGTCTCACTCTATCGCCCAGGCTGGAATGCAGTGGCATGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGATACTCCTGCCTCAGCCTCCTGAGTAGCTGGGATCACAGGCATGTGCCACCATGCCCTGCTAAGTTTTGTGTTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCTGCCTCAACCTCCCAAAGTGCTGGGATTACGGGCATAAGCCACCGCGCCTGGCCCATACATTTATTTAACCAAAGTTTTAGTGACATGGAAGCCTTTGGAATGAAGGCCTGAAGCCCAGGGAAGGCCAGGGAAGGCTGGAAGTTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6085:HG4_PB_pbsv_1883:HG3_PB_pbsv_1865:HG2_PB_pbsv_1886:HG2_PB_PB10Xdip_17489:HG3_Ill_MetaSV_2635:HG4_Ill_MetaSV_2581:HG2_Ill_MetaSV_2494:HG2_Ill_GATKHCSBGrefine_1212:HG4_Ill_GATKHCSBGrefine_1246:HG3_Ill_GATKHCSBGrefine_1208:HG4_PB_HySA_2764:HG3_PB_SVrefine2Falcon1Dovetail_1163:HG4_Ill_SVrefine2DISCOVARDovetail_1323:HG3_Ill_SVrefine2DISCOVARDovetail_1298:HG4_PB_SVrefine2PBcRDovetail_1000:HG3_PB_SVrefine2PBcRDovetail_1010:HG2_PB_SVrefine2PBcRplusDovetail_5616:HG2_PB_SVrefine2PB10Xhap12_1469:HG2_PB_SVrefine2Falcon2Bionano_705:HG2_Ill_SVrefine2DISCOVARplusDovetail_6534:HG2_10X_SVrefine210Xhap12_1425;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1425:HG2_Ill_SVrefine2DISCOVARplusDovetail_6534:HG2_PB_SVrefine2Falcon2Bionano_705:HG2_PB_SVrefine2PB10Xhap12_1469:HG2_PB_SVrefine2PBcRplusDovetail_5616;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0446429;ClusterMaxSizeDiff=0.0436508;ClusterMaxEditDist=0.205954;PBcalls=12;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=988;DistBack=10073;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=259;REFWIDENED=2:47995846-47996104;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.996;PctRecOverlap=0.7915;SizeDiff=-4;StartDistance=-205;EndDistance=-205;GTMatch=0;TruScore=92;MatchId=2799.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:1/1:0:21:0:13:./.:0:1:0:4:1/1:0:11:0/1:20:128:.:1410:.
chr2	49061376	HG2_Ill_GATKHCSBGrefine_1218	T	TTTGGAGGGCTCAGAAGAAGACAGGAAAATGTGGAAAAGTTTGGAACTTCCTAGAGAC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_2214:HG3_PB_pbsv_1871:HG3_Ill_manta_391:HG2_Ill_manta_509:HG4_Ill_manta_445:HG3_PB_assemblyticsfalcon_13510:HG4_PB_assemblyticsfalcon_13277:HG2_PB_assemblyticsPBcR_13037:HG2_PB_PB10Xdip_17497:HG3_PB_HySA_2821:HG2_PB_pbsv_1894:HG4_Ill_svaba_2284:HG4_Ill_svaba_2285:HG3_Ill_svaba_2334:HG3_Ill_scalpel_1845:HG3_Ill_Krunchall_2469:HG3_Ill_GATKHC_3029:HG3_Ill_GATKHCSBGrefine_1213:HG3_Ill_250bpfermikitraw_2401:HG3_Ill_150bpfermikitraw_2307:HG2_Ill_svaba_2260:HG2_Ill_GATKHC_2962:HG2_Ill_GATKHCSBGrefine_1219:HG2_Ill_250bpfermikitraw_2417:HG2_Ill_150bpfermikitraw_2215:HG4_PB_pbsv_1890:HG2_PB_HySA_3500:HG4_PB_HySA_2770:HG4_Ill_Krunchall_2539:HG4_Ill_GATKHC_2949:HG4_Ill_GATKHCSBGrefine_1251:HG4_Ill_250bpfermikitraw_2408:HG4_Ill_150bpfermikitraw_2338:HG3_Ill_svaba_2333:HG2_Ill_svaba_2259:HG2_Ill_Krunchall_2442:HG2_Ill_GATKHC_2961:HG2_Ill_GATKHCSBGrefine_1218:HG2_Ill_250bpfermikitraw_2416;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2214:HG4_Ill_svaba_2284:HG4_Ill_Krunchall_2539:HG4_Ill_GATKHC_2949:HG4_Ill_GATKHCSBGrefine_1251:HG4_Ill_250bpfermikitraw_2408:HG4_Ill_150bpfermikitraw_2338:HG3_Ill_svaba_2333:HG2_Ill_svaba_2259:HG2_Ill_Krunchall_2442:HG2_Ill_GATKHC_2961:HG2_Ill_GATKHCSBGrefine_1218:HG2_Ill_250bpfermikitraw_2416;NumExactMatchSVs=13;ClusterMaxShiftDist=0.140351;ClusterMaxSizeDiff=0.140351;ClusterMaxEditDist=0.34188;PBcalls=10;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=70212;DistForward=59;DistMin=59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=112;REFWIDENED=2:49061377-49061488;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2801.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:44:1/1:4:16:4:22:./.:2:14:1:17:1/1:1:47:./.:.:.:.:.:.
chr2	49087916	HG2_PB_SVrefine2Falcon2Bionano_708	TTTGACATTTCCTACTACA	CCTGTGGGCCTTTGCTAAGGCAGGGAGGACGCTTTCATTTTAAATGACAATTTGATACCAAAAATAGGAAGTGAAACAAAGCCTGACAATCAAGCTGGGATTCTAAGCTAGGTGAATGGGAAATCTTCTTGGCTCTGGGTGCTAATTAGTTCTTGTGACCTTGGGCGAATGGTCACCATCTCTGGGCCTCAGTTTCCCAGTATGCACATTTAGAAGAAGGAAATACATGATTTCCAAAGTCTATTCCGAGATTTGTTCTCTATACTGCTCTGCTACCGTGCCTCTTAGACAGATGTTACTTTTCTGGTTGCTAACCACCAGCTGCTCTATTT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2498:HG4_PB_HySA_2771:HG2_PB_PB10Xdip_17498:HG4_PB_assemblyticsfalcon_13278:HG3_PB_assemblyticsfalcon_13511:HG3_PB_SVrefine2PBcRDovetail_1013:HG3_PB_SVrefine2Falcon1Dovetail_1169:HG3_Ill_SVrefine2DISCOVARDovetail_1305:HG2_PB_assemblyticsPBcR_13038:HG2_PB_SVrefine2PBcRplusDovetail_5620:HG2_PB_SVrefine2PB10Xhap12_1473:HG2_PB_SVrefine2Falcon2Bionano_708:HG2_PB_SVrefine2Falcon1plusDovetail_6090:HG4_Ill_SVrefine2DISCOVARDovetail_1333:HG2_Ill_SVrefine2DISCOVARplusDovetail_6540:HG2_10X_SVrefine210Xhap12_1431:HG4_PB_SVrefine2PBcRDovetail_1003:HG2_PB_pbsv_1895:HG3_Ill_Spiral_1929:HG4_PB_pbsv_1891:HG3_PB_pbsv_1872:HG4_Ill_Spiral_139:HG2_Ill_Spiral_114:HG3_Ill_MetaSV_2637:HG4_Ill_MetaSV_2584;NumClusterSVs=25;ExactMatchIDs=HG2_PB_PB10Xdip_17498:HG4_PB_assemblyticsfalcon_13278:HG3_PB_assemblyticsfalcon_13511:HG3_PB_SVrefine2PBcRDovetail_1013:HG3_PB_SVrefine2Falcon1Dovetail_1169:HG3_Ill_SVrefine2DISCOVARDovetail_1305:HG2_PB_assemblyticsPBcR_13038:HG2_PB_SVrefine2PBcRplusDovetail_5620:HG2_PB_SVrefine2PB10Xhap12_1473:HG2_PB_SVrefine2Falcon2Bionano_708:HG2_PB_SVrefine2Falcon1plusDovetail_6090;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0917431;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.214067;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=313;DistBack=0;DistForward=17290;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:49087935-49087915;PctSeqSimilarity=0.9833;PctSizeSimilarity=0.9872;PctRecOverlap=0.9335;SizeDiff=4;StartDistance=-13;EndDistance=5;GTMatch=0;TruScore=96;MatchId=2802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:98:1/1:0:27:1:28:1/1:0:21:0:25:1/1:0:29:1/1:2:53:.:.:.
chr2	49733480	HG2_PB_SVrefine2PB10Xhap12_1476	T	TTTTAATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3164:HG3_PB_HySA_2825:HG4_PB_pbsv_1897:HG3_PB_pbsv_1874:HG2_PB_pbsv_1901:HG2_PB_assemblyticsPBcR_13048:HG4_PB_assemblyticsfalcon_13284:HG3_PB_assemblyticsfalcon_13517:HG2_PB_HySA_3512:HG3_Ill_MetaSV_2639:HG2_PB_SVrefine2PBcRplusDovetail_5623:HG2_PB_SVrefine2PB10Xhap12_1476:HG2_Ill_MetaSV_2500:HG4_Ill_MetaSV_2586:HG2_10X_SVrefine210Xhap12_1436:HG2_PB_SVrefine2Falcon2Bionano_710:HG2_PB_SVrefine2Falcon1plusDovetail_6092:HG2_PB_PB10Xdip_17499;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_MetaSV_2500:HG2_PB_SVrefine2PB10Xhap12_1476:HG2_PB_SVrefine2PBcRplusDovetail_5623;NumExactMatchSVs=3;ClusterMaxShiftDist=0.147465;ClusterMaxSizeDiff=0.147465;ClusterMaxEditDist=0.205837;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=325;DistBack=29153;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:49733481-49733494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2803.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:97:1/1:0:37:0:29:1/1:0:5:0:6:1/1:0:31:1/1:2:94:.:.:.
chr2	50602629	HG2_PB_SVrefine2PBcRplusDovetail_5624	T	TAATTCTGAAGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCCTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_3519:HG2_PB_pbsv_1903:HG4_PB_assemblyticsfalcon_13294:HG3_PB_pbsv_1875:HG3_PB_assemblyticsfalcon_13522:HG2_PB_assemblyticsPBcR_13052:HG3_PB_HySA_2831:HG4_PB_pbsv_1899:HG3_Ill_MetaSV_2640:HG2_Ill_MetaSV_2501:HG2_10X_SVrefine210Xhap12_1437:HG3_PB_SVrefine2PBcRDovetail_1015:HG3_PB_SVrefine2Falcon1Dovetail_1172:HG3_Ill_GATKHCSBGrefine_1215:HG2_PB_SVrefine2PBcRplusDovetail_5624:HG2_PB_SVrefine2Falcon2Bionano_711:HG2_PB_SVrefine2Falcon1plusDovetail_6093:HG2_Ill_GATKHCSBGrefine_1225:HG4_PB_HySA_2787;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1225:HG2_PB_SVrefine2Falcon1plusDovetail_6093:HG2_PB_SVrefine2Falcon2Bionano_711:HG2_PB_SVrefine2PBcRplusDovetail_5624:HG3_Ill_GATKHCSBGrefine_1215;NumExactMatchSVs=5;ClusterMaxShiftDist=0.16;ClusterMaxSizeDiff=0.16;ClusterMaxEditDist=0.249292;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=331;DistBack=1786;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:50602630-50602644;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2805.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:2:26:0:7:./.:0:2:0:9:1/1:0:31:1/1:2:77:.:.:.
chr2	53117391	HG2_Ill_Krunchall_2477	T	TATACATATATACGTATATACGTATATACATATATACGTATATACGTATATACACAC	20	PASS	ClusterIDs=HG4_PB_pbsv_1910:HG4_Ill_Krunchall_2576:HG2_Ill_Krunchall_2477:HG2_PB_HySA_3537:HG4_PB_HySA_2801;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_Krunchall_2477:HG4_Ill_Krunchall_2576;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.168067;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=27;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=2:53117390-53117393;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:26:./.:30:10:8:10:./.:32:5:1:29:0/1:29:26:./.:.:.:.:.:.
chr2	54325043	HG3_PB_SVrefine2Falcon1Dovetail_1176	T	TCCTTTCTTCTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGCTCACTGCAAGCTCCGCCTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTCAGTAGAGACGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1176:HG2_PB_pbsv_1914:HG3_PB_pbsv_1885:HG2_PB_HySA_3545:HG3_PB_assemblyticsfalcon_13541;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1176;NumExactMatchSVs=1;ClusterMaxShiftDist=0.157978;ClusterMaxSizeDiff=0.157978;ClusterMaxEditDist=0.2496;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=317;DistBack=1615;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=2:54325044-54325062;PctSeqSimilarity=0.986;PctSizeSimilarity=0.9724;PctRecOverlap=0.9694;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:33:0|1:27:0:2:28:1|0:1:10:24:0:0/1:17:4:0/1:11:16:.:.:.
chr2	55172217	HG2_PB_SVrefine2PBcRplusDovetail_5633	T	TCCTCCCTCTCTCCCTCCTCTCCCACTCCTCCCTCTCTCCTCCCATCCCATTCCTCCCTCCCTCATCCCTCCCTACCCCTCCTCCCCCTCCCCTCTTTCCCCCTCCCCTCTCTCCCCTCCCCTCTCTCCTCCTCCCTTCTCTCCTCCTCCCTCTATTCCTCCCCTTCCCTCCCTCCCCTACCCCTTCCATTCCTCCCTTCCCCCTTCCATTCCTCCCCTTGCTCCCCTTCCCTCCCCCTCCCCTCCCCTCCTCCTTCCATGCCTCCCCCTGCCCCCTTCCATACTTCCCCCTGCCCCCTTTCATACTTCCACCCTCCCCACTTCCATGCCTCCCCCTCTCCCCTCCCCTTCCCTCCCCTCTCCCCTCCCCCTACCCCTCTCCCCTCCCCTTCCCTTCCCCTCCCCCTTCCCTCCGCCACCTCTTCTCTCCCCTTCCCTCCCCATTCCCTTCCCCTTCCCTTCCCCACCTCTCCCCTCCCCTTCCCTTCCCCACCTCTCCCCTCCCCTTCCCTTCCCCACCTCTCCCCTCCCCCTTCCCTTCCCCACCTCTCCCCCACCTCTCCCCCTCCCCACCTCTCCCCCACCTCTCCCCTCCCCACCTCTCCCCGCCCCTCCCCTCCCCACCTCTCCCCTCCTCCACCTCTCCCCTCCCTCTCCCCTCTCCCACCTCTCCCCTCCCTCTCCCCTCTCCCCTCCCCTCCCTCACCTCTCCCCTCCCCTCCCCCACCTCTCCCCTCCCTCTCCCCTCCCCTCCCCCACCTCTCCCCTCCCTCTCCCCTCCCCTCCCCCACCTCTCCCCTCCCTCTCCCCTCCCCTCCCCCACCTCTCCCCTCCCCTCCCCCACCTCTCCCCTCCCCTCCCCCACCTCTCCCCTCCCTCTCCCCTCCCCTCCCTCACCTCTCCCCTCCCCTCCCCACCTCTCCCCTCCCCTCCCCCACCTCTCCCCTCCCCTCCCCACCTCTCCCTCCCCTCCCCCACCTCTCCCCTCCCCTCCCCCACCTCTCCCTCCCTCTCCCCTCCCTCTTCCCTCCCTCTTCCCCACCTCTCCCTCCCCTCCCCACCTCTCCCCTCCCTCTCCCCTCCCTCTTCCCCACCTCTCCCCTCCCTCTTCCCTCCCCCCACCTCTCCCTTCCCTCTTCCCTCCCCCACCTTCCCCTCCCTATTCCGTCCCTCCCCTTCTCCCCTCCCCTTCTCCCCTCCCCTTTCCCCCTTCCCTTTTTCCCCCTCCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCCTTCTCTGCCCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCCTTCTCCACCCCCTTCTCTTCTCCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCCTTCTCCTCTCCCCTTCTCTCCCCCCTTCTCTCTCCTCTTCTCCCCCCTCTCCCCTCCCCCTCTCTCCCCTCCCCCTTATCCCCCATTCCCTCCCACTTGTCTCCCCTCCCCTTATCCCCTCCCACTTGTCTCCCCTCCCCTTATCCCCTCCCACTTGTCTCCCCCTCCCATTATCCCCTCCCACTTGTCTCCCCCTCCCCCTTATCCCCTCCCACTTGTCTCCCCCTCCCCCTTATCCCCTCCCACTTGTCTCCCCCCTCCCCCTTATCCCCTCCCACTTGTCTCCCCTTCCCCCTTCTACCCCCTCCCCCTTCTCCCCCTCCCCTTCTTCCCCTCCCCCATCTCCCCCCTCCCCCATCTCCCCCCGTCCCCCATCTCCCCCCTCCCCCATCTCCCCCCGTCCCCCATCTCCCCCTCCCCCATCTCCCCCTCCCCCTTCTTCCCCCCTCCTTCTCTTCCCTCCCCCTTCTCCTCCCTCCCCTTCTCCTCCCTCCCCCTTCTCCCCTCCCCCTTCTCCCCTCCCCCTTCTCCCCTCCCCCTTCTCCCCTCCCCCTTCTCTCCCCTCCCCCTTCTCTCCCCTCCCCCTTCTCTCCCCTCCCTCTTCTCTCCCTCTCCCCCTTCCCCCCCCTTCGCCTCCCTTCCCCTCCCTTCGCCTCCCCTTCCCCTCCCCTTCGCCTCCCCTTCCCCTCCCCTTCGCCTTCCCTTCCCCTCCCCTTCGCCTCCCCTTCCCCTCCCCTTCGCCTCCCCTTTCCCTCCCCTTCCCCTCCCCTTTCCCTCCCCTTCCCCTCCCCTTCCCCTCCCCCACCCCTTCCCCTCCCCTCCCCCTCCCCTTCCCCTCCGCTTCCCCTCCCCTTCCCCTCCCCTTCCCCTCTCATTCCCTTCCCCTCCCCTCCCCTTCTCTCCTCTTCTCTCCCCCTCCCCTTCTCTCCCCTTCCCCTTCTCTCCCCCTCCCCTTCTCTCCCCTTCTCTCCCCTTCTCTCCCCCTCCCCTTCTTTCCCCTTTTCTCCCCCTCTCTCCCCCTCTCTCCCCCCTCCCCTTCTCTCCCCCCTCCCCTTCTCTCCCCCCTCCCCTTCTCTCCCCTTCTCTCCCCTTCTCTCCCTTTCTCTCCCCCTCTCTCCCCGTCTCTCCCCCTCTCTCCCCCTCTCTCCCCCTCTCTCCCCCCTCCCCTTCTCTTCCCCTCTCCCTTTTCCCTTCTCTCCCCCTCTCCCTTTTCCCTTCTCTCCCCCTCTCCCTTTTCCCTTCTCTCCCCCTCTCCCTTTTCCCTTCTCTCCCCCCTCCCTTTTCCCTTCTCTCCCCCTCCCTCTTCTCTCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTCTCTCCTCGCCCCCTCCCTCTTCTCTCTCCTCGCCCCCTCCCTCTTCTCTCTCCTCGCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTGTCTCCTCGCCCCCTCCCTCTTCTCTCTCCTCGCCCCCTCCCTCTTCTCTCTCCTCTCGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1179:HG2_PB_pbsv_1917:HG2_PB_HySA_3554:HG3_PB_pbsv_1890:HG2_PB_PB10Xdip_17514:HG2_PB_HySA_3553:HG2_PB_assemblyticsPBcR_13082:HG2_PB_assemblyticsfalcon_13490:HG2_PB_SVrefine2Falcon1plusDovetail_6100:HG4_PB_pbsv_1916:HG2_PB_SVrefine2Falcon2Bionano_719:HG2_PB_SVrefine2PBcRplusDovetail_5633:HG2_PB_SVrefine2PB10Xhap12_1487:HG3_PB_assemblyticsfalcon_13553;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5633;NumExactMatchSVs=1;ClusterMaxShiftDist=0.290301;ClusterMaxSizeDiff=0.290301;ClusterMaxEditDist=0.321014;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=3122;DistBack=20673;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=140;REFWIDENED=2:55172218-55172357;PctSeqSimilarity=0.9867;PctSizeSimilarity=0.979;PctRecOverlap=0.9564;SizeDiff=-67;StartDistance=-106;EndDistance=-106;GTMatch=0;TruScore=97;MatchId=2810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:69:./.:0:6:0:4:./.:0:3:0:6:./.:0:2:1/1:4:87:.:3124:.
chr2	55611659	HG2_PB_SVrefine2Falcon1plusDovetail_6101	A	ATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTGTATATATACATATATACGTATGTATGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6101:HG4_PB_pbsv_1918:HG2_PB_pbsv_1918:HG2_PB_SVrefine2Falcon2Bionano_722;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6101:HG2_PB_SVrefine2Falcon2Bionano_722;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0327485;ClusterMaxSizeDiff=0.0304094;ClusterMaxEditDist=0.169374;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=420;DistBack=-19;DistForward=-1;DistMin=-19;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=134;REFWIDENED=2:55611660-55611793;PctSeqSimilarity=0.9934;PctSizeSimilarity=1;PctRecOverlap=0.9121;SizeDiff=0;StartDistance=-37;EndDistance=-37;GTMatch=0;TruScore=96;MatchId=2811.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:0|1:26:4:0:16:./.:1:4:2:0:0/1:13:12:0/1:8:34:.:.:.
chr2	55711254	HG4_PB_SVrefine2PBcRDovetail_1015	A	ACCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCCTTCCCTTCCCTTCCCTT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_1015:HG2_PB_pbsv_1919:HG4_PB_pbsv_1919:HG2_PB_SVrefine2Falcon2Bionano_723;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_1015;NumExactMatchSVs=1;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.19598;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=180;DistBack=-145;DistForward=-1;DistMin=-145;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:55720965-55711426;PctSeqSimilarity=0.938;PctSizeSimilarity=0.8411;PctRecOverlap=0.5674;SizeDiff=-34;StartDistance=-76;EndDistance=-76;GTMatch=0;TruScore=78;MatchId=2812.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:37:1|0:3:30:35:2:./.:1:2:2:5:./.:0:0:./.:.:.:.:.:.
chr2	58060066	HG2_PB_SVrefine2PBcRplusDovetail_5640	T	TCAGTGCTATCCCCGTCAAGCTACCATTGATTTTCTTCACAGAATTAGAAAAAACTTCTTTAAATTTCATACGGAACCAAAAATGAGCCTGCATAGCTAAGACAATCCTAAACCAAAAGAATAAAGCTGGAAGCATCATGCTACCTGACTTCAAACTATACTACAATGCCACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATACAGACCAACGGAATAGAACAGAGGCCTCAGAAATAATGCCACACATCTACAAGCATCTGATCTTTGACAAACCTGACCAAAACAAGCAATAGGGGAAGGATTCCCTATTTAATAAATGGTGTTGGGAAAACAGGCTAGCCATAGGCAGAAAATTGAAACTTGGCCCCTTCCTTACCCCTTATACAAAAATTAACTCAAGATAGATTAAAGACTTAAATGTGAGACCTAAAACCATAAAAATCCTAGAAGAAAACCTAGACAATACCATTCAGGACATAGGCATGGGCAAAGACTTCATGACTAAAACACCAGAAGCAATGGCAAGGAAAGTCAAAATTGACAAATGGGATCTAATTAAACTCAACAGCTTCTACACAGCAAAAGAAACTATCATCAGAGTGAACAGGCAACCCACAGAATGGGAGAAAATTATTGCAATCTATCCAAAGAGCTAATATCCTGACAAATAGCTAATATCTAATAGCTAATATCTGACAAAGAGCTAATATCCTGAATCTACAAAGAACTTAACAAATTTACAAAAAAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAACAGACACGAAAAAATGCTCACTATCACTGGTCATTAGAGAAATGCAAATCAAAACCATAATGAGGTACCATCTCACACCAGTTAGAATAGAAATAATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGCTGTGGAGAAATTGAAACGCTTTTACACTGTTGGTAGGAGTGTAAATTAGTTGAACCATTGTGGAAGAGAGTGTAGCGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGATCCAGCAATCTCATTACTGGGTATATACCCAAAGGTTTATAAAACATTCTACTATAAAGACACATGCACACGTATGTTTATTGTGGCACGCACACAATAGCAAAGACTTAGAACCAACCCAAATGCCCATCAATGAGAGACTGGATAAAGAAAATGAAGCACATATACACCATGGAATACTATGCAGTCATAAAAATGGATGAGTTAATGTCCTTTTCAGGGACATGGATGAAGCTGGAAATGATCATTTTCAGCAAACTAACACAAGAACAGAAAACCAAACACCGCATGTTCTCACTCATAAGCGGGAGTTGAACAATAAGAACACAGGCACACAGGGAGGGGAACCTCACACACCTGGGCCTGTCAGGGGGCTGGAGGGTAGGCGAGGGATAGCATTAGGAGAAATCTCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACCACCATGGCACATGTATACCTATGTAACAAACATGCACATTCTGCACATGTACTCCAGAACTTAAAGTATAATAAAAAAAATTAAAATAGGACTACCACACTTCTGAATGTATATCCAAAGGAATTAAAATTAGTATCTTGAAAAGATATGTGAACTACCATGTTTATTGCTGCATTATCACTAAAGCCAAGATATAGAATCAACCTATGTCCAGATGAATAAAGAAAATGTGGTATTTATGTATGCAATAGAATTACTCAGCTTTTAAAAAAGAAAATCCTGTCATTTGCAACAATATGGATGAATCTCAAAAACATTACACTAAGTAAATTGAGTCAAGCACAGAAAGAAATATTGCATGATCCTTACTTACATGTGAACTCTGAAAAAAGTTGAACTCACAGATTTACAGAGTAGAACTGTAATTGCCAGAGGCTAAGAAGTGTTGGTCAAAAGGTACAAAGTTTCAGTTAGACAGGATGAATAAGTACAGGATGGTGATATAGTTAACAGCAATGTATTCTGTACTTTCTAGTCATGGTAATAAGGTAAAAAGAACATATAAATATATAAAATTTGGAAAAAAATCATAAAACTGCTATTATTCATTAACAACATGGTTATATATAAAAATCAAAAACTAATTTAAATTTAGCAGTAAACTAATATATCAATTGTTCATAAGTCATTATTAATTATCAGTATTAAATAATCGGTATCAATATTTATTAATTTTAACAATTATTAATTAAAAAATCAGTGATTCATCAAGGGAGCTGAATATAGGATAAATACACAGAAATCTAATGTTTAATATGCTGGCAATGTCAGTTTAAAAATGGAAGTTTTAAAATGATATAAATTAAAATTGCACCAAAACCTACCTAACACATATTAATTATTCTACACTACATTGATGAAAGAATTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTCACCCAGTCTGGAGTGCAGTGGCGCAATCTCGGCTCACTACAAGCTCCGCCTCCCGGGTTCACGACATTCTCCTGCCTCAGCCTCCCCAGTATCTGGGACTACAGGCGCCCGCTACCACACCCGGCTAGTTTTTTTTAATTTTTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACCGACCCGAGCCTGATGAAAGAATTTTTTAGAAGGCCTAAAATAAGTTGGTGATATAATGTTTTGGTAGAAATATAAAGGACCAGAAATGATAAGGCAATGTAGAAGAACAAATATAAAAGCTTGGCACTTCTTGTGAGCAAGATTGATTATAGACATTCAGTAACTAACATGCTGTGGTCTTCCTTCAAGAACATATGTGTGGACTAATAAAAGAAAATACAGAGACCAGAACAAGTCTATAAACATCCCATACACATACAGTTACTTGATTAATGGAAAAGATCATACAGCTTATACACAACAGTATAGCAGAAAGGGATGATCTTTCAATTATTGGTTCTAGGTCAAAAGTGAAAATGTATAAAATATGAGCCTTGATGTATATGCCTACTGCAAAAGATAAAAAAGCCTCTATAAGTTAACACAGTTTAATATGTTTCTTTCTGCAAAGGACACAAAAAGCCCAAGTTACAGTTGGAAAAGATGGATAAATTAAACTGCATCAAAATTAAGAACTTCTTTGTATCAAAAATGTCATTAAAAGAATAAAAATGCAAGCTACACTCTGGAAGAAGAAATCTGAAATACACATACCTAACAAAGGAACTCAATTCAGGATGTATAGGTAACTCCTATATGAAAATTTAAAAAAAGAGAAAAAAATAGAAAAATAGGCAAGTAGCTTCAACAGACACTTCACAAATCAAAAGATCAAGATGACCAATAAACATATGAAAACAACTTCATTATTATAAAATACCACTATACACCGTTTGGAATGGCTGGAATTAGAAAGCACTGATAATTCAAAGTGATGATGAGGATGTGAAACAAGTGGAGCTCTCAAACTCTGCAGATGGTACCGTCTACAGGTAGAACTACTTTGGAAAACTGGTAGCATCACTAAAGTCAGATACATGCACATCACATAACCCAACAGGCTCACTCACTGGTATGTTAGAAATGCATATATATGTTCACTAAAAGGCATGTATTAGAGCATTAATTGCCTATTTGCCAAAAACTGGAAATAGATAAATATCCATCCAGAGTATGTATAGATAAATATACAAGATAATAGTAAAGCAGCTTCAATAATTAACAAAATACTGCTATATATGTATGAATTTCGTTGACACAATTTGAGCAAAATTGGCTAGACATAAAAGAATACCTAATAAATGAATCATTTATATTAAATTCAAATACAAGCATAATCCAGAGGTTTAGAAAAATCTAACAATAATATAGAGTATCATAGCCATAATCTAGAATGTTAGAAGTCACAGGATGGTTACCTTTGGGAGTGAGGTATAATGACAGGGTGTGGAATAGGGGGCTTCTGGGGCTGCAGATAGAGTTCTGTTTCTTAACTATGTAGTGGTTACATAGGGTGTTCCCTTTGTAAAAATTCATTTAGCTATAAGAATTCAGAATCACTAATGATTTGTA	20	PASS	ClusterIDs=HG4_PB_HySA_2842:HG3_PB_pbsv_1907:HG4_PB_pbsv_1932:HG2_PB_HySA_3577:HG2_PB_SVrefine2Falcon1plusDovetail_6106:HG2_PB_SVrefine2PB10Xhap12_1491:HG3_PB_SVrefine2PBcRDovetail_1027:HG4_Ill_SVrefine2DISCOVARDovetail_1374:HG3_Ill_SVrefine2DISCOVARDovetail_1347:HG2_PB_SVrefine2PBcRplusDovetail_5640:HG2_10X_SVrefine210Xhap12_1455:HG3_PB_SVrefine2Falcon1Dovetail_1188:HG2_PB_HySA_3576:HG4_PB_HySA_2843:HG2_PB_PB10Xdip_17534;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1455:HG2_PB_SVrefine2PBcRplusDovetail_5640:HG3_Ill_SVrefine2DISCOVARDovetail_1347:HG4_Ill_SVrefine2DISCOVARDovetail_1374;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0400609;ClusterMaxSizeDiff=0.0395924;ClusterMaxEditDist=0.178035;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=4199;DistBack=50134;DistForward=7009;DistMin=7009;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:58060067-58060068;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2813.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:42:0|1:36:3:0:20:1|0:0:15:30:0:0/1:31:19:0/1:162:276:.:4101:.
chr2	58813087	HG2_Ill_GATKHC_3046	T	TATATATAATATATAATATATTATATAATATATAATATATAATATATTATATA	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_2283:HG3_Ill_scalpel_1896:HG3_Ill_GATKHC_3136:HG3_Ill_GATKHCSBGrefine_1249:HG3_Ill_250bpfermikitraw_2483:HG3_Ill_150bpfermikitraw_2393:HG3_Ill_svaba_2407:HG3_Ill_manta_404:HG3_Ill_Krunchall_2550:HG3_Ill_GATKHC_3135:HG3_Ill_GATKHCSBGrefine_1248:HG3_Ill_250bpfermikitraw_2482:HG2_Ill_svaba_2319:HG2_Ill_scalpel_1774:HG2_Ill_Krunchall_2515:HG2_Ill_GATKHC_3046:HG2_Ill_GATKHCSBGrefine_1251:HG2_Ill_250bpfermikitraw_2481;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2283:HG3_Ill_svaba_2407:HG3_Ill_manta_404:HG3_Ill_Krunchall_2550:HG3_Ill_GATKHC_3135:HG3_Ill_GATKHCSBGrefine_1248:HG3_Ill_250bpfermikitraw_2482:HG2_Ill_svaba_2319:HG2_Ill_scalpel_1774:HG2_Ill_Krunchall_2515:HG2_Ill_GATKHC_3046:HG2_Ill_GATKHCSBGrefine_1251:HG2_Ill_250bpfermikitraw_2481;NumExactMatchSVs=13;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0188679;PBcalls=0;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=11;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=52;DistBack=74;DistForward=52;DistMin=52;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=277;REFWIDENED=2:58812932-58813208;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2814.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:39:./.:15:20:3:11:./.:1:0:0:2:0/1:20:20:./.:.:.:.:.:.
chr2	59769588	HG2_PB_SVrefine2Falcon2Bionano_730	G	GATGGATTAATTGACTGGTTGTCCTTCATATCCTGCACTAACCTCTATTACAGCATGGAGAGGTACTTTTGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1459:HG3_PB_pbsv_1915:HG4_PB_HySA_2851:HG2_PB_pbsv_1930:HG2_PB_PB10Xdip_17539:HG3_PB_HySA_2892:HG2_PB_HySA_3588:HG4_PB_SVrefine2PBcRDovetail_1024:HG4_Ill_svaba_2353:HG4_Ill_scalpel_1720:HG4_Ill_manta_457:HG4_Ill_SVrefine2DISCOVARDovetail_1381:HG4_Ill_Krunchall_2631:HG4_Ill_GATKHC_3052:HG4_Ill_GATKHCSBGrefine_1289:HG4_Ill_250bpfermikitraw_2490:HG4_Ill_150bpfermikitraw_2417:HG3_PB_SVrefine2PBcRDovetail_1032:HG3_PB_SVrefine2Falcon1Dovetail_1193:HG3_Ill_svaba_2416:HG3_Ill_SVrefine2DISCOVARDovetail_1355:HG3_Ill_Krunchall_2559:HG3_Ill_GATKHC_3148:HG3_Ill_GATKHCSBGrefine_1252:HG3_Ill_250bpfermikitraw_2494:HG3_Ill_150bpfermikitraw_2403:HG2_PB_SVrefine2PBcRplusDovetail_5644:HG2_PB_SVrefine2PB10Xhap12_1495:HG2_PB_SVrefine2Falcon2Bionano_730:HG2_PB_SVrefine2Falcon1plusDovetail_6110:HG2_Ill_svaba_2327:HG2_Ill_scalpel_1780:HG2_Ill_manta_518:HG2_Ill_SVrefine2DISCOVARplusDovetail_6580:HG2_Ill_Krunchall_2526:HG2_Ill_GATKHC_3056:HG2_Ill_GATKHCSBGrefine_1254:HG2_Ill_250bpfermikitraw_2489:HG2_Ill_150bpfermikitraw_2292;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1459:HG4_PB_SVrefine2PBcRDovetail_1024:HG4_Ill_svaba_2353:HG4_Ill_scalpel_1720:HG4_Ill_manta_457:HG4_Ill_SVrefine2DISCOVARDovetail_1381:HG4_Ill_Krunchall_2631:HG4_Ill_GATKHC_3052:HG4_Ill_GATKHCSBGrefine_1289:HG4_Ill_250bpfermikitraw_2490:HG4_Ill_150bpfermikitraw_2417:HG3_PB_SVrefine2PBcRDovetail_1032:HG3_PB_SVrefine2Falcon1Dovetail_1193:HG3_Ill_svaba_2416:HG3_Ill_SVrefine2DISCOVARDovetail_1355:HG3_Ill_Krunchall_2559:HG3_Ill_GATKHC_3148:HG3_Ill_GATKHCSBGrefine_1252:HG3_Ill_250bpfermikitraw_2494:HG3_Ill_150bpfermikitraw_2403:HG2_PB_SVrefine2PBcRplusDovetail_5644:HG2_PB_SVrefine2PB10Xhap12_1495:HG2_PB_SVrefine2Falcon2Bionano_730:HG2_PB_SVrefine2Falcon1plusDovetail_6110:HG2_Ill_svaba_2327:HG2_Ill_scalpel_1780:HG2_Ill_manta_518:HG2_Ill_SVrefine2DISCOVARplusDovetail_6580:HG2_Ill_Krunchall_2526:HG2_Ill_GATKHC_3056:HG2_Ill_GATKHCSBGrefine_1254:HG2_Ill_250bpfermikitraw_2489:HG2_Ill_150bpfermikitraw_2292;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0413793;ClusterMaxEditDist=0.310811;PBcalls=13;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=71;DistBack=51113;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=71;REFWIDENED=2:59769589-59769659;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2816.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:1:47:0:6:1/1:1:16:1:24:1/1:0:40:./.:.:.:.:.:.
chr2	62501898	HG2_PB_HySA_3604	T	TAGCTATACATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCATGGCACAATCTCGGCTCACTGCAAGCTCCGCCTCCGGTTCACGCCATTCTCCTGCCTCAGCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCGGCTAATGTTTGTATTTTTAGTAGAGACGGGTTTCACCGTTTTAGCCGGGATGGTCCTGACCTCGTGATCCGCCGCCTCGGCCTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG2_PB_HySA_3604:HG2_PB_assemblyticsfalcon_13527:HG4_PB_pbsv_1943:HG4_PB_assemblyticsfalcon_13361:HG2_PB_pbsv_1938:HG2_PB_SVrefine2Falcon2Bionano_733:HG2_PB_assemblyticsPBcR_13120:HG2_PB_SVrefine2Falcon1plusDovetail_6113:HG2_PB_SVrefine2PBcRplusDovetail_5648;NumClusterSVs=9;ExactMatchIDs=HG2_PB_HySA_3604;NumExactMatchSVs=1;ClusterMaxShiftDist=0.178344;ClusterMaxSizeDiff=0.178344;ClusterMaxEditDist=0.203822;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=308;DistBack=83253;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=2:62501899-62501910;PctSeqSimilarity=0.9825;PctSizeSimilarity=0.9686;PctRecOverlap=0.9687;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2819.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:44:0|1:32:2:0:36:1|0:0:11:33:0:./.:38:4:0/1:10:29:.:.:.
chr2	62957997	HG2_PB_PB10Xdip_17554	G	CAGACAGACAGGCAGAGAAAGAGAGTAAGCCAGAAGGCAGACACACACACACACACAGAGAGAGACAGAGACAGATGGAGAGACAGAGAGAAAGAGACAGAGAGAGGCAGAAACAGACAGAAAGAGAGAGACACAGAGAGAGAGACAGAGACAGAGAGAGAGACAGAGACAGGAGAGAGAGAGACAGAGAGAGACAGACAGACAGGCAGAGAAAGACAGTAAGATAGAAGACAGACACAGAGAGAGAGAGAGACAGACAGACAGGCAGAGAAAGACAGTAAGACAGAAGACAGACCCAGAGAGAGAGAGACAGGTGGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGACAGGCAGAGAGAGAGACAGAGAGACGGACAGAGAGAGAGACAGGCAGAGAGAGAGAGACAGAGAGACAGAGAGAGAGACAGGCAGAGAGAGAGAGAGAAACAGACAGACAGGGAGAGAGAGAGACTGACAGGCAGAGAAAGAGAATAAGACAGAAGACAGACACAGTGAGACAGGGAGAGAGAGAGACAGACAGACAGGGAGAGAGAGAGAGAGACTGACAGACAGACAGACAGGCAGAGAAAGAGAATAAGACAGAAGACAGACACAGTGAGACAGAGAGAGACAGAGACAGAGAGACAGAAAGAGACAGACAAAGACAGAGACGGACAGAGAGAGACAGAGACAGAGAGAGACAGAGAGAGAGAGAGAGAAACACACACACACACACACACACACACACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6115:HG3_PB_pbsv_1924:HG2_PB_pbsv_1940:HG4_PB_pbsv_1945:HG2_Ill_GATKHCSBGrefine_1261:HG3_Ill_GATKHCSBGrefine_1261:HG4_PB_HySA_2864:HG2_Ill_MetaSV_2511:HG4_Ill_MetaSV_2601:HG3_Ill_MetaSV_2654:HG4_Ill_GATKHCSBGrefine_1298:HG2_Ill_breakscan11_3165:HG2_PB_PB10Xdip_17554:HG4_PB_HySA_2863:HG2_PB_SVrefine2PBcRplusDovetail_5650:HG3_PB_SVrefine2Falcon1Dovetail_1198:HG2_Ill_SVrefine2DISCOVARplusDovetail_6599:HG4_PB_SVrefine2PBcRDovetail_1030:HG4_Ill_SVrefine2DISCOVARDovetail_1392:HG3_Ill_SVrefine2DISCOVARDovetail_1366:HG2_PB_SVrefine2Falcon2Bionano_735:HG2_PB_SVrefine2PB10Xhap12_1504;NumClusterSVs=22;ExactMatchIDs=HG2_PB_PB10Xdip_17554;NumExactMatchSVs=1;ClusterMaxShiftDist=0.049576;ClusterMaxSizeDiff=0.0445026;ClusterMaxEditDist=0.195122;PBcalls=12;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=749;DistBack=-9;DistForward=5361;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:62957998-62957996;PctSeqSimilarity=0.9941;PctSizeSimilarity=0.996;PctRecOverlap=0.988;SizeDiff=-3;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=99;MatchId=2820.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:85:1/1:0:23:1:25:./.:3:18:6:34:1/1:1:23:1/1:9:175:.:.:.
chr2	63779221	HG3_Ill_GATKHCSBGrefine_1263	T	TGGCCCTGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3166:HG2_PB_pbsv_1942:HG2_PB_SVrefine2Falcon1plusDovetail_6116:HG4_PB_pbsv_1946:HG2_PB_HySA_3614:HG3_PB_pbsv_1926:HG2_PB_assemblyticsfalcon_13536:HG3_PB_assemblyticsfalcon_13602:HG2_PB_SVrefine2Falcon2Bionano_736:HG3_PB_SVrefine2Falcon1Dovetail_1199:HG4_Ill_MetaSV_2602:HG4_Ill_GATKHCSBGrefine_1299:HG3_Ill_GATKHCSBGrefine_1263;NumClusterSVs=13;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_1263:HG4_Ill_GATKHCSBGrefine_1299:HG4_Ill_MetaSV_2602;NumExactMatchSVs=3;ClusterMaxShiftDist=0.135952;ClusterMaxSizeDiff=0.135952;ClusterMaxEditDist=0.28655;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=14117;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:63779222-63779236;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9849;PctRecOverlap=0.982;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2821.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:34:41:0|1:33:1:0:30:0|1:14:0:0:9:0/1:17:5:0/1:6:37:.:.:.
chr2	63949666	HG2_PB_HySA_3619	G	GCCAGCTACCCAGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCCAGCTCTGCCCGGCCGCCCCTACTGGAAGTGAGGAGCCCTCTCCGCCGGC	10	PASS	ClusterIDs=HG4_PB_pbsv_1949:HG2_PB_PB10Xdip_17557:HG2_PB_SVrefine2PB10Xhap12_1509:HG2_PB_SVrefine2Falcon2Bionano_738:HG2_PB_SVrefine2PB10Xhap12_1508:HG2_PB_HySA_3619:HG2_PB_PB10Xdip_17558:HG2_PB_pbsv_1946;NumClusterSVs=8;ExactMatchIDs=HG2_PB_HySA_3619;NumExactMatchSVs=1;ClusterMaxShiftDist=0.14346;ClusterMaxSizeDiff=0.142259;ClusterMaxEditDist=0.291667;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=127;DistBack=-73;DistForward=-1;DistMin=-73;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=475;REFWIDENED=2:63949268-63949742;PctSeqSimilarity=0.9625;PctSizeSimilarity=0.9921;PctRecOverlap=0.9528;SizeDiff=1;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=96;MatchId=2822.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:28:0|1:14:4:3:19:./.:0:2:4:0:./.:17:1:./.:.:.:.:.:.
chr2	63965512	HG2_Ill_MetaSV_2512	T	TATCAGGGCTACTATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATG	20	PASS	ClusterIDs=HG4_PB_HySA_2870:HG2_PB_pbsv_1947:HG2_Ill_breakscan11_3168:HG4_PB_pbsv_1950:HG2_PB_HySA_3620:HG2_PB_SVrefine2Falcon2Bionano_739:HG2_Ill_SVrefine2DISCOVARplusDovetail_6605:HG2_Ill_MetaSV_2512;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_MetaSV_2512:HG2_Ill_SVrefine2DISCOVARplusDovetail_6605;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.043956;ClusterMaxEditDist=0.206522;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=179;DistBack=15793;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:63965513-63965527;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2823.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:37:./.:37:14:2:15:1|0:0:20:20:0:0/1:25:13:./.:.:.:.:.:.
chr2	65100036	HG3_Ill_GATKHCSBGrefine_1270	A	ACACCTGGCTAATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCCCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_3641:HG3_PB_pbsv_1936:HG4_PB_pbsv_1956:HG3_PB_HySA_2926:HG3_PB_assemblyticsfalcon_13610:HG2_PB_assemblyticsPBcR_13139:HG2_PB_assemblyticsfalcon_13549:HG3_PB_SVrefine2PBcRDovetail_1035:HG2_PB_pbsv_1952:HG3_PB_SVrefine2Falcon1Dovetail_1204:HG4_PB_SVrefine2PBcRDovetail_1035:HG4_Ill_MetaSV_2603:HG4_Ill_GATKHCSBGrefine_1305:HG3_Ill_manta_408:HG3_Ill_GATKHCSBGrefine_1270:HG2_PB_SVrefine2PBcRplusDovetail_5657:HG2_Ill_MetaSV_2513:HG2_Ill_GATKHCSBGrefine_1267:HG2_10X_SVrefine210Xhap12_1473:HG2_PB_SVrefine2Falcon2Bionano_743:HG3_Ill_MetaSV_2656:HG2_PB_SVrefine2PB10Xhap12_1513:HG2_PB_SVrefine2Falcon1plusDovetail_6123:HG2_PB_PB10Xdip_17581:HG2_PB_PB10Xdip_17580:HG4_PB_HySA_2879;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1473:HG2_Ill_GATKHCSBGrefine_1267:HG2_Ill_MetaSV_2513:HG2_PB_SVrefine2PBcRplusDovetail_5657:HG3_Ill_GATKHCSBGrefine_1270:HG3_Ill_manta_408:HG4_Ill_GATKHCSBGrefine_1305:HG4_Ill_MetaSV_2603;NumExactMatchSVs=8;ClusterMaxShiftDist=0.208531;ClusterMaxSizeDiff=0.208531;ClusterMaxEditDist=0.263492;PBcalls=18;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=318;DistBack=28834;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=24;REFWIDENED=2:65100037-65100060;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2824.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:0:25:0:25:./.:1:3:0:12:1/1:0:17:1/1:2:56:.:.:.
chr2	65163767	HG2_PB_SVrefine2PBcRplusDovetail_5658	T	TCCATGGATATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTGTATTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGAACTCCTGACCTCGTGATCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5658:HG3_PB_pbsv_1937:HG2_PB_PB10Xdip_17582:HG2_PB_pbsv_1953:HG2_PB_HySA_3642:HG2_PB_assemblyticsPBcR_13140:HG3_PB_HySA_2927:HG2_Ill_breakscan11_3169:HG2_PB_SVrefine2PB10Xhap12_1514;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5658;NumExactMatchSVs=1;ClusterMaxShiftDist=0.146341;ClusterMaxSizeDiff=0.146341;ClusterMaxEditDist=0.212209;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=14706;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:65163768-65163783;PctSeqSimilarity=0.9879;PctSizeSimilarity=0.976;PctRecOverlap=0.9761;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2825.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:22:41:1|0:5:24:15:3:./.:29:0:1:3:0/1:32:6:0/1:5:29:.:.:.
chr2	65333785	HG4_Ill_GATKHCSBGrefine_1306	C	CAAAAATCTTCTAAACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCAAGGTGAAACCCCGTCTCTACTAAAAATACGAAAAGTTAGCCGGGCGTAGTGGCGGGCGCCTGTTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2658:HG2_PB_pbsv_1954:HG4_PB_pbsv_1958:HG2_PB_HySA_3644:HG2_Ill_breakscan11_3170:HG3_PB_pbsv_1938:HG4_Ill_MetaSV_2604:HG4_Ill_GATKHCSBGrefine_1306:HG3_Ill_GATKHCSBGrefine_1271:HG2_Ill_GATKHCSBGrefine_1268:HG2_PB_assemblyticsPBcR_13142:HG3_PB_assemblyticsfalcon_13611:HG2_PB_assemblyticsfalcon_13551:HG4_PB_SVrefine2PBcRDovetail_1037:HG4_Ill_SVrefine2DISCOVARDovetail_1399:HG2_Ill_SVrefine2DISCOVARplusDovetail_6611:HG2_10X_SVrefine210Xhap12_1475:HG2_PB_SVrefine2PBcRplusDovetail_5659:HG2_PB_SVrefine2Falcon2Bionano_744:HG3_PB_SVrefine2Falcon1Dovetail_1205:HG2_PB_SVrefine2Falcon1plusDovetail_6124;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1268:HG3_Ill_GATKHCSBGrefine_1271:HG4_Ill_GATKHCSBGrefine_1306:HG4_Ill_MetaSV_2604;NumExactMatchSVs=4;ClusterMaxShiftDist=0.194719;ClusterMaxSizeDiff=0.194719;ClusterMaxEditDist=0.25539;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=308;DistBack=-18;DistForward=16;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=22;REFWIDENED=2:65333782-65333803;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2826.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:81:1/1:5:20:2:26:./.:0:7:1:9:1/1:0:30:1/1:3:47:.:.:.
chr2	65393722	HG3_PB_SVrefine2Falcon1Dovetail_1206	T	TGTGCATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTAGCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGGCCGGCTAATTTTTTGTATTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCAGCC	20	PASS	ClusterIDs=HG3_PB_HySA_2929:HG3_PB_pbsv_1939:HG2_PB_pbsv_1955:HG2_PB_assemblyticsfalcon_13552:HG3_PB_assemblyticsfalcon_13612:HG2_PB_SVrefine2Falcon1plusDovetail_6125:HG4_PB_SVrefine2Falcon1Dovetail_1172:HG3_PB_SVrefine2Falcon1Dovetail_1206:HG2_Ill_breakscan11_3171;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1206;NumExactMatchSVs=1;ClusterMaxShiftDist=0.108108;ClusterMaxSizeDiff=0.108108;ClusterMaxEditDist=0.143084;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=3752;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=2:65393723-65393733;PctSeqSimilarity=0.9874;PctSizeSimilarity=0.975;PctRecOverlap=0.9751;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2827.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:36:./.:17:11:5:13:0|1:30:0:0:5:0/1:12:3:./.:3:26:.:.:.
chr2	65569358	HG2_PB_pbsv_1957	A	AGATATATGTTGTATATTTTGTATAACGATATATTATGGTATGTAATTATTTTTTGGTATACGTATATTATGTATGTTATTTGTATACGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_1038:HG2_PB_pbsv_1957:HG2_PB_SVrefine2Falcon2Bionano_745:HG4_PB_pbsv_1960;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_1957;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0914286;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.262857;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=89;DistBack=76;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=75;REFWIDENED=2:65569284-65569358;PctSeqSimilarity=0.9433;PctSizeSimilarity=0.9438;PctRecOverlap=0.573;SizeDiff=5;StartDistance=36;EndDistance=36;GTMatch=0;TruScore=82;MatchId=2828.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:21:5:2:15:0/0:11:0:13:0:0/0:65:0:./.:.:.:.:.:.
chr2	66658980	HG4_PB_HySA_2888	A	AAAAACAAAAGAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5661:HG3_PB_pbsv_1945:HG2_PB_assemblyticsfalcon_13561:HG3_PB_assemblyticsfalcon_13620:HG2_PB_pbsv_1960:HG3_PB_HySA_2934:HG3_PB_SVrefine2Falcon1Dovetail_1211:HG2_PB_SVrefine2PB10Xhap12_1517:HG2_PB_SVrefine2Falcon1plusDovetail_6128:HG2_PB_PB10Xdip_17602:HG4_PB_pbsv_1966:HG2_PB_HySA_3648:HG4_PB_HySA_2888:HG4_PB_SVrefine2Falcon1Dovetail_1176:HG2_PB_assemblyticsPBcR_13152:HG4_PB_SVrefine2PBcRDovetail_1041;NumClusterSVs=16;ExactMatchIDs=HG4_PB_HySA_2888;NumExactMatchSVs=1;ClusterMaxShiftDist=0.106222;ClusterMaxSizeDiff=0.106222;ClusterMaxEditDist=0.259587;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=328;DistBack=138222;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=2:66658981-66658991;PctSeqSimilarity=0.9851;PctSizeSimilarity=0.9762;PctRecOverlap=0.9763;SizeDiff=-8;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=97;MatchId=2830.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:11:26:0|1:11:0:0:22:./.:26:0:1:7:0/1:33:9:0/1:7:23:.:.:.
chr2	67349958	HG2_PB_SVrefine2PBcRplusDovetail_5665	G	GAATTCCTGCTGTGCAGCAAATGTCTTATCTTTATACCTTATCATTTTTAAATTCTTGACACATCCTCCAAGACACTGAGTAATCTTTCTAGCCCTAATTGGAATAACTCAACAGATATTCCTTTAGTGACAATTGTGTGTAAGGTCTTATATGAAGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3172:HG4_PB_pbsv_1971:HG3_PB_pbsv_1951:HG2_PB_PB10Xdip_17608:HG2_PB_pbsv_1965:HG2_PB_assemblyticsPBcR_13160:HG3_PB_assemblyticsfalcon_13626:HG4_PB_SVrefine2PBcRDovetail_1045:HG4_Ill_svaba_2385:HG4_Ill_manta_463:HG4_Ill_SVrefine2DISCOVARDovetail_1408:HG4_Ill_MetaSV_2607:HG4_Ill_GATKHCSBGrefine_1311:HG4_Ill_Cortex_1800:HG4_Ill_250bpfermikitraw_2532:HG3_Ill_svaba_2448:HG3_Ill_manta_411:HG3_Ill_Spiral_2023:HG3_Ill_MetaSV_2659:HG3_Ill_GATKHCSBGrefine_1275:HG3_Ill_Cortex_1853:HG2_PB_SVrefine2PBcRplusDovetail_5665:HG2_PB_SVrefine2PB10Xhap12_1521:HG2_PB_SVrefine2Falcon2Bionano_750:HG2_PB_SVrefine2Falcon1plusDovetail_6131:HG2_Ill_svaba_2357:HG2_Ill_manta_527:HG2_Ill_SpiralSDKrefine_8510:HG2_Ill_SVrefine2DISCOVARplusDovetail_6620:HG2_Ill_MetaSV_2516:HG2_Ill_GATKHCSBGrefine_1273:HG2_Ill_Cortex_4312:HG2_10X_SVrefine210Xhap12_1482:HG3_PB_SVrefine2Falcon1Dovetail_1216;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1482:HG2_Ill_Cortex_4312:HG2_Ill_GATKHCSBGrefine_1273:HG2_Ill_MetaSV_2516:HG2_Ill_SVrefine2DISCOVARplusDovetail_6620:HG2_Ill_SpiralSDKrefine_8510:HG2_Ill_manta_527:HG2_Ill_svaba_2357:HG2_PB_SVrefine2Falcon1plusDovetail_6131:HG2_PB_SVrefine2Falcon2Bionano_750:HG2_PB_SVrefine2PB10Xhap12_1521:HG2_PB_SVrefine2PBcRplusDovetail_5665:HG3_Ill_Cortex_1853:HG3_Ill_GATKHCSBGrefine_1275:HG3_Ill_MetaSV_2659:HG3_Ill_Spiral_2023:HG3_Ill_manta_411:HG3_Ill_svaba_2448:HG4_Ill_250bpfermikitraw_2532:HG4_Ill_Cortex_1800:HG4_Ill_GATKHCSBGrefine_1311:HG4_Ill_MetaSV_2607:HG4_Ill_SVrefine2DISCOVARDovetail_1408:HG4_Ill_manta_463:HG4_Ill_svaba_2385:HG4_PB_SVrefine2PBcRDovetail_1045;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0621118;ClusterMaxSizeDiff=0.0557276;ClusterMaxEditDist=0.176829;PBcalls=12;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=157;DistBack=7610;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=2:67349959-67349961;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2832.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:14:69:1/1:11:42:2:20:1/1:1:48:1:30:1/1:0:35:./.:.:.:.:.:.
chr2	69744657	HG2_PB_SVrefine2Falcon2Bionano_753	G	GCTCCCTGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17619:HG2_PB_pbsv_1973:HG2_PB_HySA_3676:HG3_PB_assemblyticsfalcon_13645:HG2_PB_assemblyticsPBcR_13174:HG2_PB_PB10Xdip_17618:HG2_PB_SVrefine2Falcon2Bionano_753:HG4_PB_pbsv_1982:HG2_PB_SVrefine2Falcon1plusDovetail_6136:HG4_PB_SVrefine2Falcon1Dovetail_1177:HG4_PB_SVrefine2PBcRDovetail_1049:HG3_PB_SVrefine2Falcon1Dovetail_1221:HG2_PB_SVrefine2PBcRplusDovetail_5669:HG2_PB_SVrefine2PB10Xhap12_1528:HG4_PB_HySA_2911:HG2_Ill_breakscan11_3173;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_753;NumExactMatchSVs=1;ClusterMaxShiftDist=0.153125;ClusterMaxSizeDiff=0.153125;ClusterMaxEditDist=0.258268;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=2:69744658-69744669;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2833.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:56:1|0:1:42:35:1:1|0:0:6:28:0:0/1:20:7:0/1:12:35:.:.:.
chr2	70183611	HG4_Ill_GATKHCSBGrefine_1321	A	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	20	PASS	ClusterIDs=HG3_Ill_250bpfermikitraw_2556:HG2_PB_HySA_3678:HG4_Ill_GATKHC_3125:HG4_Ill_GATKHCSBGrefine_1321:HG3_Ill_GATKHC_3222:HG3_Ill_GATKHCSBGrefine_1282:HG2_Ill_GATKHC_3131:HG4_PB_pbsv_1983:HG3_PB_pbsv_1957:HG4_PB_HySA_2913:HG3_PB_HySA_2957:HG2_PB_pbsv_1975:HG4_Ill_150bpfermikitraw_2477;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHC_3131:HG3_Ill_GATKHCSBGrefine_1282:HG3_Ill_GATKHC_3222:HG4_Ill_GATKHCSBGrefine_1321:HG4_Ill_GATKHC_3125;NumExactMatchSVs=5;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.224138;PBcalls=6;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=0;DistForward=16;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=2:70183610-70183615;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=0.9623;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=98;MatchId=2834.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:26:0|1:17:2:1:23:./.:23:2:3:6:0/1:15:8:./.:.:.:.:.:.
chr2	71706294	HG2_Ill_breakscan11_3174	G	ACCCAAATACGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAGCCA	20	PASS	ClusterIDs=HG2_PB_pbsv_1978:HG3_PB_pbsv_1962:HG4_PB_pbsv_1985:HG2_Ill_breakscan11_3174:HG3_PB_SVrefine2Falcon1Dovetail_1226:HG4_Ill_SVrefine2DISCOVARDovetail_1429:HG4_PB_SVrefine2PBcRDovetail_1052;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_breakscan11_3174;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0539084;ClusterMaxSizeDiff=0.0485175;ClusterMaxEditDist=0.169312;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=180;DistBack=-1;DistForward=20;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:71706295-71706293;PctSeqSimilarity=0.9895;PctSizeSimilarity=0.9836;PctRecOverlap=0.9508;SizeDiff=-3;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=97;MatchId=2835.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:35:0|1:42:7:1:23:./.:1:9:18:0:0/1:19:5:./.:.:.:.:.:.
chr2	72244731	HG2_PB_SVrefine2Falcon1plusDovetail_6145	T	TTGTATCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTTACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGCGCGCCACCATGCCCGGCTAATTTTTGTATTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1040:HG4_PB_SVrefine2Falcon1Dovetail_1184:HG2_PB_pbsv_1982:HG4_PB_pbsv_1990:HG2_PB_SVrefine2Falcon2Bionano_757:HG3_PB_pbsv_1969:HG2_PB_SVrefine2Falcon1plusDovetail_6145:HG4_Ill_GATKHCSBGrefine_1329:HG3_Ill_MetaSV_2661:HG3_PB_SVrefine2Falcon1Dovetail_1230;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6145:HG2_PB_SVrefine2Falcon2Bionano_757;NumExactMatchSVs=2;ClusterMaxShiftDist=0.132492;ClusterMaxSizeDiff=0.126183;ClusterMaxEditDist=0.207519;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=324;DistBack=-10;DistForward=-1;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:72244732-72244748;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2837.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:17:0|1:17:0:0:17:./.:13:0:0:0:0/1:21:10:0/1:9:29:.:.:.
chr2	74125479	HG2_PB_PB10Xdip_17642	T	TGCACTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3175:HG2_PB_pbsv_1984:HG4_PB_pbsv_1992:HG4_PB_HySA_2936:HG2_PB_HySA_3706:HG2_PB_assemblyticsPBcR_13202:HG4_PB_assemblyticsfalcon_13444:HG2_PB_assemblyticsfalcon_13610:HG3_PB_assemblyticsfalcon_13675:HG3_PB_pbsv_1971:HG2_PB_PB10Xdip_17643:HG2_PB_PB10Xdip_17642:HG3_PB_HySA_2993:HG2_PB_SVrefine2Falcon2Bionano_760:HG2_PB_SVrefine2PBcRplusDovetail_5681:HG2_PB_SVrefine2PB10Xhap12_1544:HG4_PB_SVrefine2Falcon1Dovetail_1187:HG2_PB_SVrefine2Falcon1plusDovetail_6148:HG3_PB_SVrefine2PBcRDovetail_1043:HG3_PB_SVrefine2Falcon1Dovetail_1233:HG2_10X_SVrefine210Xhap12_1506:HG4_PB_SVrefine2PBcRDovetail_1057;NumClusterSVs=22;ExactMatchIDs=HG2_PB_PB10Xdip_17642:HG2_PB_PB10Xdip_17643;NumExactMatchSVs=2;ClusterMaxShiftDist=0.127854;ClusterMaxSizeDiff=0.127854;ClusterMaxEditDist=0.203193;PBcalls=20;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=327;DistBack=18433;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=2:74125480-74125490;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9849;PctRecOverlap=0.982;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2838.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:19:0:24:1/1:1:5:0:5:./.:2:25:1/1:3:49:.:.:.
chr2	74259591	HG2_Ill_GATKHC_3159	T	TGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGATGGCCCCAGCGGCTGCAAGAGGG	20	PASS	ClusterIDs=HG2_PB_HySA_3708:HG2_10X_SVrefine210Xhap12_1507:HG2_PB_pbsv_1985:HG4_Ill_GATKHC_3155:HG4_Ill_GATKHCSBGrefine_1332:HG2_Ill_GATKHC_3159:HG2_Ill_GATKHCSBGrefine_1291;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1291:HG2_Ill_GATKHC_3159:HG4_Ill_GATKHCSBGrefine_1332:HG4_Ill_GATKHC_3155;NumExactMatchSVs=4;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.214286;ClusterMaxEditDist=0.357143;PBcalls=2;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=55;DistBack=40162;DistForward=28740;DistMin=28740;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=2:74259592-74259610;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2839.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:25:0|1:34:1:0:21:./.:1:35:13:3:0/1:18:12:./.:.:.:.:.:.
chr2	75387901	HG2_PB_SVrefine2Falcon1plusDovetail_6149	C	AGAGGCCGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGACATAACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_762:HG2_Ill_breakscan11_3177:HG2_PB_assemblyticsfalcon_13619:HG2_PB_SVrefine2Falcon1plusDovetail_6149:HG4_PB_pbsv_1996:HG2_Ill_MetaSV_2524:HG3_PB_assemblyticsfalcon_13683:HG3_PB_SVrefine2Falcon1Dovetail_1235:HG4_PB_assemblyticsfalcon_13455:HG2_PB_pbsv_1989:HG4_PB_SVrefine2Falcon1Dovetail_1190:HG4_PB_HySA_2943:HG2_PB_HySA_3715;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6149:HG2_PB_assemblyticsfalcon_13619;NumExactMatchSVs=2;ClusterMaxShiftDist=0.154839;ClusterMaxSizeDiff=0.154839;ClusterMaxEditDist=0.176183;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=-2;DistForward=54663;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9993;REFWIDENED=2:75397695-75387900;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9937;PctRecOverlap=0.9937;SizeDiff=-2;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=2840.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:40:0|1:50:0:0:34:1|0:0:7:32:0:0/1:36:16:0/1:11:41:.:.:.
chr2	76196502	HG3_PB_pbsv_1979	T	TCACAGGGACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAGAGTTCTCGCTCTGTCGCCCAGTTTTCGGACTGCGGGACTGCAAGTCTGGCGCAATCTCGGCTCACTGCAGCTCCGACTTCCCGGTTCAGCCGCCATTCTCCTGCTCAGCCTCCCGAGTAGCTGGGACTAAGGCGCCCGCCCCACCGCGCCCGGCTAATTTTTTGTTATTTTAGTAGAGACGGAGGGTTTCACCTTGTTAGCCAGGATTGGTCTCCGATCGTCCTACCTCATGATCAACCCGCCTCGGCCTCCCAAAGTTGCTGGGATTACAAGGCGTGAGCCACCCGCGCCGCGGGCACA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3178:HG2_PB_PB10Xdip_17756:HG2_PB_pbsv_1995:HG3_PB_HySA_3009:HG3_PB_pbsv_1979:HG2_PB_assemblyticsfalcon_13626:HG3_PB_assemblyticsfalcon_13690:HG2_PB_HySA_3721:HG3_PB_SVrefine2Falcon1Dovetail_1239:HG2_PB_SVrefine2Falcon2Bionano_767:HG2_PB_SVrefine2Falcon1plusDovetail_6153:HG2_PB_SVrefine2PB10Xhap12_1550;NumClusterSVs=12;ExactMatchIDs=HG3_PB_pbsv_1979;NumExactMatchSVs=1;ClusterMaxShiftDist=0.149296;ClusterMaxSizeDiff=0.149296;ClusterMaxEditDist=0.239437;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=371;DistBack=3;DistForward=12229;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:76196498-76196514;PctSeqSimilarity=0.9486;PctSizeSimilarity=0.9623;PctRecOverlap=0.9623;SizeDiff=14;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=95;MatchId=2841.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:29:1|0:0:26:31:1:0|1:31:0:0:7:0/1:34:8:0/1:7:22:.:.:.
chr2	76784102	HG2_Ill_manta_538	G	GCAGGAGTTGGGCTGAGATTAAAACATAAAGTTACTAGATCCACAGTCAATTCATTGACCATGCTCTTCATTTGAGAAAACACTTAATGCTTGTTTCCCACTTTGTTCCTTTAAATTGCTACAATTCCAGGGTTATTTCAGAGAACTCTCTTTTCGCAATAATTATAAGAATT	20	PASS	ClusterIDs=HG3_PB_pbsv_1986:HG4_PB_SVrefine2PBcRDovetail_1062:HG3_PB_SVrefine2Falcon1Dovetail_1244:HG2_PB_SVrefine2PBcRplusDovetail_5690:HG2_PB_SVrefine2Falcon1plusDovetail_6157:HG2_Ill_SVrefine2DISCOVARplusDovetail_6663:HG2_10X_SVrefine210Xhap12_1520:HG2_PB_pbsv_2003:HG4_PB_assemblyticsfalcon_13474:HG4_PB_SVrefine2Falcon1Dovetail_1195:HG4_Ill_svaba_2449:HG4_Ill_manta_469:HG4_Ill_SVrefine2DISCOVARDovetail_1445:HG4_Ill_MetaSV_2614:HG4_Ill_GATKHCSBGrefine_1341:HG4_Ill_Cortex_1816:HG4_Ill_250bpfermikitraw_2609:HG4_Ill_150bpfermikitraw_2523:HG3_PB_assemblyticsfalcon_13702:HG3_Ill_svaba_2503:HG3_Ill_manta_416:HG3_Ill_Spiral_2066:HG3_Ill_MetaSV_2666:HG3_Ill_GATKHCSBGrefine_1300:HG3_Ill_Cortex_1868:HG2_PB_assemblyticsfalcon_13639:HG2_PB_assemblyticsPBcR_13228:HG2_PB_SVrefine2Falcon2Bionano_772:HG2_Ill_svaba_2417:HG2_Ill_manta_538:HG2_Ill_SpiralSDKrefine_8568:HG2_Ill_MetaSV_2528:HG2_Ill_GATKHCSBGrefine_1300:HG2_Ill_Cortex_4343:HG2_Ill_250bpfermikitraw_2604:HG2_Ill_150bpfermikitraw_2399:HG2_Ill_breakscan11_3179:HG4_PB_pbsv_2005;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2399:HG2_Ill_250bpfermikitraw_2604:HG2_Ill_Cortex_4343:HG2_Ill_GATKHCSBGrefine_1300:HG2_Ill_MetaSV_2528:HG2_Ill_SpiralSDKrefine_8568:HG2_Ill_manta_538:HG2_Ill_svaba_2417:HG2_PB_SVrefine2Falcon2Bionano_772:HG2_PB_assemblyticsPBcR_13228:HG2_PB_assemblyticsfalcon_13639:HG3_Ill_Cortex_1868:HG3_Ill_GATKHCSBGrefine_1300:HG3_Ill_MetaSV_2666:HG3_Ill_Spiral_2066:HG3_Ill_manta_416:HG3_Ill_svaba_2503:HG3_PB_assemblyticsfalcon_13702:HG4_Ill_150bpfermikitraw_2523:HG4_Ill_250bpfermikitraw_2609:HG4_Ill_Cortex_1816:HG4_Ill_GATKHCSBGrefine_1341:HG4_Ill_MetaSV_2614:HG4_Ill_SVrefine2DISCOVARDovetail_1445:HG4_Ill_manta_469:HG4_Ill_svaba_2449:HG4_PB_SVrefine2Falcon1Dovetail_1195:HG4_PB_assemblyticsfalcon_13474;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0566572;ClusterMaxSizeDiff=0.0564972;ClusterMaxEditDist=0.216066;PBcalls=13;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=172;DistBack=10513;DistForward=18843;DistMin=10513;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:76784103-76784102;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2842.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:79:./.:0:0:0:1:1/1:0:21:0:17:1/1:0:44:./.:.:.:1830:.:.
chr2	77316365	HG2_Ill_SpiralSDKrefine_8570	T	TCTTGTCTCTACCCCTTCTATGCTTTTCCGGGGACAGGGCAAGTACCCCAACCCCTTCTCTC	20	PASS	ClusterIDs=HG4_PB_HySA_2952:HG2_PB_pbsv_2005:HG2_PB_HySA_3731:HG4_PB_pbsv_2008:HG4_Ill_svaba_2452:HG2_PB_PB10Xdip_17770:HG4_Ill_GATKHC_3178:HG4_Ill_GATKHCSBGrefine_1345:HG4_Ill_250bpfermikitraw_2612:HG4_Ill_150bpfermikitraw_2526:HG2_Ill_svaba_2421:HG2_Ill_SpiralSDKrefine_8570:HG2_Ill_Krunchall_2632:HG2_Ill_GATKHC_3188:HG2_Ill_GATKHCSBGrefine_1302:HG2_Ill_250bpfermikitraw_2607:HG2_Ill_150bpfermikitraw_2402:HG2_Ill_breakscan11_3180;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2402:HG2_Ill_250bpfermikitraw_2607:HG2_Ill_GATKHCSBGrefine_1302:HG2_Ill_GATKHC_3188:HG2_Ill_Krunchall_2632:HG2_Ill_SpiralSDKrefine_8570:HG2_Ill_svaba_2421:HG4_Ill_150bpfermikitraw_2526:HG4_Ill_250bpfermikitraw_2612:HG4_Ill_GATKHCSBGrefine_1345:HG4_Ill_GATKHC_3178:HG4_Ill_svaba_2452;NumExactMatchSVs=12;ClusterMaxShiftDist=0.205128;ClusterMaxSizeDiff=0.188034;ClusterMaxEditDist=0.290598;PBcalls=5;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=0;DistForward=10378;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=162;REFWIDENED=2:77316264-77316425;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2843.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:23:0|1:24:3:2:20:./.:1:10:20:0:0/1:16:9:./.:.:.:.:.:.
chr2	78558068	HG4_Ill_manta_475	T	TGTCTCCCAATGTTTTAGACAAAATGTTGAGCTTAGTGACACTTACTACTGAAAGTAATAGAACTCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3182:HG4_PB_pbsv_2017:HG3_PB_HySA_3027:HG3_PB_pbsv_1991:HG2_PB_assemblyticsfalcon_13651:HG2_PB_assemblyticsPBcR_13247:HG4_PB_assemblyticsfalcon_13485:HG4_PB_SVrefine2PBcRDovetail_1069:HG4_Ill_svaba_2464:HG4_Ill_manta_475:HG4_Ill_SVrefine2DISCOVARDovetail_1453:HG4_Ill_Krunchall_2762:HG4_Ill_GATKHC_3194:HG4_Ill_GATKHCSBGrefine_1350:HG4_Ill_Cortex_1819:HG4_Ill_250bpfermikitraw_2626:HG4_Ill_150bpfermikitraw_2539:HG3_PB_SVrefine2Falcon1Dovetail_1248:HG3_Ill_svaba_2512:HG3_Ill_manta_417:HG3_Ill_Spiral_2074:HG3_Ill_Krunchall_2673:HG3_Ill_GATKHC_3295:HG3_Ill_GATKHCSBGrefine_1305:HG3_Ill_Cortex_1869:HG3_Ill_250bpfermikitraw_2606:HG3_Ill_150bpfermikitraw_2520:HG2_PB_SVrefine2PBcRplusDovetail_5695:HG2_PB_SVrefine2PB10Xhap12_1558:HG2_PB_SVrefine2Falcon2Bionano_776:HG2_PB_SVrefine2Falcon1plusDovetail_6160:HG2_Ill_svaba_2432:HG2_Ill_manta_544:HG2_Ill_SpiralSDKrefine_8577:HG2_Ill_SVrefine2DISCOVARplusDovetail_6669:HG2_Ill_Krunchall_2643:HG2_Ill_GATKHC_3201:HG2_Ill_GATKHCSBGrefine_1306:HG2_Ill_Cortex_4351:HG2_Ill_250bpfermikitraw_2620:HG2_Ill_150bpfermikitraw_2415:HG2_10X_SVrefine210Xhap12_1526:HG2_PB_PB10Xdip_17774:HG2_PB_PB10Xdip_17773;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1526:HG2_Ill_150bpfermikitraw_2415:HG2_Ill_250bpfermikitraw_2620:HG2_Ill_Cortex_4351:HG2_Ill_GATKHCSBGrefine_1306:HG2_Ill_GATKHC_3201:HG2_Ill_Krunchall_2643:HG2_Ill_SVrefine2DISCOVARplusDovetail_6669:HG2_Ill_SpiralSDKrefine_8577:HG2_Ill_manta_544:HG2_Ill_svaba_2432:HG2_PB_SVrefine2Falcon1plusDovetail_6160:HG2_PB_SVrefine2Falcon2Bionano_776:HG2_PB_SVrefine2PB10Xhap12_1558:HG2_PB_SVrefine2PBcRplusDovetail_5695:HG3_Ill_150bpfermikitraw_2520:HG3_Ill_250bpfermikitraw_2606:HG3_Ill_Cortex_1869:HG3_Ill_GATKHCSBGrefine_1305:HG3_Ill_GATKHC_3295:HG3_Ill_Krunchall_2673:HG3_Ill_Spiral_2074:HG3_Ill_manta_417:HG3_Ill_svaba_2512:HG3_PB_SVrefine2Falcon1Dovetail_1248:HG4_Ill_150bpfermikitraw_2539:HG4_Ill_250bpfermikitraw_2626:HG4_Ill_Cortex_1819:HG4_Ill_GATKHCSBGrefine_1350:HG4_Ill_GATKHC_3194:HG4_Ill_Krunchall_2762:HG4_Ill_SVrefine2DISCOVARDovetail_1453:HG4_Ill_manta_475:HG4_Ill_svaba_2464:HG4_PB_SVrefine2PBcRDovetail_1069:HG4_PB_assemblyticsfalcon_13485;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0592593;ClusterMaxSizeDiff=0.0592593;ClusterMaxEditDist=0.188406;PBcalls=14;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=66;DistBack=-1;DistForward=44431;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:78558069-78558070;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2844.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:55:1/1:1:23:3:21:1/1:1:30:0:25:1/1:0:61:./.:.:.:.:.:.
chr2	78965410	HG3_Ill_GATKHCSBGrefine_1307	T	TAAAACAATGTTTTACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3183:HG4_PB_pbsv_2020:HG3_PB_pbsv_1992:HG2_PB_HySA_3750:HG2_PB_assemblyticsfalcon_13657:HG4_PB_assemblyticsfalcon_13491:HG2_PB_HySA_3749:HG2_PB_pbsv_2015:HG3_PB_SVrefine2Falcon1Dovetail_1250:HG4_PB_HySA_2968:HG3_PB_HySA_3029:HG4_Ill_MetaSV_2620:HG4_Ill_GATKHCSBGrefine_1354:HG3_Ill_MetaSV_2668:HG3_Ill_GATKHCSBGrefine_1307:HG2_Ill_MetaSV_2532:HG2_Ill_GATKHCSBGrefine_1310:HG2_PB_SVrefine2Falcon1plusDovetail_6161:HG4_PB_SVrefine2Falcon1Dovetail_1201:HG2_PB_SVrefine2Falcon2Bionano_777;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1310:HG2_Ill_MetaSV_2532:HG3_Ill_GATKHCSBGrefine_1307:HG3_Ill_MetaSV_2668:HG4_Ill_GATKHCSBGrefine_1354:HG4_Ill_MetaSV_2620;NumExactMatchSVs=6;ClusterMaxShiftDist=0.152104;ClusterMaxSizeDiff=0.148867;ClusterMaxEditDist=0.193038;PBcalls=13;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=19121;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:78965411-78965426;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2845.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:39:0|1:39:1:0:25:0|1:23:0:0:10:0/1:26:8:0/1:8:33:.:.:.
chr2	81074662	HG3_Ill_GATKHCSBGrefine_1312	T	TTCCTATATATATATATATATATATTCCTATATATATATATATATATATATATATATATATATATATATATA	20	PASS	ClusterIDs=HG3_PB_pbsv_2000:HG4_PB_HySA_2984:HG3_Ill_GATKHC_3314:HG3_Ill_GATKHCSBGrefine_1312:HG3_Ill_150bpfermikitraw_2537:HG2_Ill_manta_547:HG4_Ill_GATKHC_3218:HG4_Ill_GATKHCSBGrefine_1360:HG2_Ill_GATKHC_3226:HG2_PB_PB10Xdip_17778:HG2_PB_pbsv_2019:HG2_PB_HySA_3765:HG4_PB_SVrefine2Falcon1Dovetail_1205:HG4_PB_pbsv_2026:HG2_PB_SVrefine2PBcRplusDovetail_5700:HG2_PB_SVrefine2PB10Xhap12_1563:HG2_PB_SVrefine2Falcon1plusDovetail_6165:HG3_PB_HySA_3040;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_manta_547:HG3_Ill_150bpfermikitraw_2537:HG3_Ill_GATKHCSBGrefine_1312:HG3_Ill_GATKHC_3314;NumExactMatchSVs=4;ClusterMaxShiftDist=0.112676;ClusterMaxSizeDiff=0.112676;ClusterMaxEditDist=0.267606;PBcalls=11;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=14;DistForward=8889;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:81074661-81074663;PctSeqSimilarity=0.973;PctSizeSimilarity=0.9467;PctRecOverlap=0.9467;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=2846.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:62:1/1:0:6:1:6:./.:1:1:0:2:1/1:0:29:./.:.:.:.:.:.
chr2	81586307	HG2_Ill_150bpfermikitraw_2446	T	TGAATTTTGTTGAAAGCCTTTTGTGCATCTATTGAGATAAGAATGTGGATTTTGTCTTTGGTTCTGTTTATGTGATAGATAGATAGATA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_2446:HG2_PB_assemblyticsfalcon_13676:HG2_PB_HySA_3773:HG3_PB_pbsv_2003:HG2_PB_HySA_3772:HG4_Ill_svaba_2486:HG2_PB_pbsv_2021:HG4_Ill_GATKHCSBGrefine_1362:HG4_PB_pbsv_2028:HG4_Ill_250bpfermikitraw_2663:HG4_Ill_150bpfermikitraw_2573:HG3_Ill_svaba_2530:HG3_Ill_Krunchall_2700:HG3_Ill_GATKHCSBGrefine_1318:HG3_Ill_250bpfermikitraw_2631:HG2_Ill_svaba_2453:HG2_Ill_Krunchall_2680:HG2_Ill_GATKHCSBGrefine_1316:HG2_Ill_250bpfermikitraw_2652;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2446:HG4_Ill_svaba_2486:HG4_Ill_GATKHCSBGrefine_1362:HG4_Ill_250bpfermikitraw_2663:HG4_Ill_150bpfermikitraw_2573:HG3_Ill_svaba_2530:HG3_Ill_Krunchall_2700:HG3_Ill_GATKHCSBGrefine_1318:HG3_Ill_250bpfermikitraw_2631:HG2_Ill_svaba_2453:HG2_Ill_Krunchall_2680:HG2_Ill_GATKHCSBGrefine_1316:HG2_Ill_250bpfermikitraw_2652;NumExactMatchSVs=13;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.385965;PBcalls=6;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=272927;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=80;REFWIDENED=2:81586308-81586387;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2847.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:25:0|1:32:1:2:22:1|0:0:23:9:0:0/1:25:27:./.:.:.:.:.:.
chr2	82098027	HG2_PB_SVrefine2PBcRplusDovetail_5702	A	AAAATAAATTCATATTCGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACACAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGTAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAATAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATTGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAACATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAATAAAATAAAAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3184:HG4_PB_HySA_2999:HG2_PB_pbsv_2022:HG2_PB_HySA_3776:HG2_PB_assemblyticsPBcR_13283:HG2_PB_assemblyticsfalcon_13680:HG4_PB_assemblyticsfalcon_13515:HG2_PB_SVrefine2Falcon1plusDovetail_6168:HG3_PB_SVrefine2Falcon1Dovetail_1255:HG2_PB_SVrefine2Falcon2Bionano_783:HG2_PB_SVrefine2PBcRplusDovetail_5702:HG4_PB_SVrefine2PBcRDovetail_1080:HG4_PB_SVrefine2Falcon1Dovetail_1209:HG3_PB_SVrefine2PBcRDovetail_1059;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5702;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0476886;ClusterMaxSizeDiff=0.0476886;ClusterMaxEditDist=0.122598;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=6055;DistBack=25540;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:82098028-82098043;PctSeqSimilarity=0.9999;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2848.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:14:70:./.:9:19:1:26:1/1:0:6:0:11:1/1:0:31:1/1:0:1401:.:6063:.
chr2	83831719	HG3_PB_SVrefine2PBcRDovetail_1064	T	TCATGACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3185:HG2_PB_pbsv_2032:HG2_PB_assemblyticsfalcon_13695:HG3_PB_pbsv_2019:HG2_PB_assemblyticsPBcR_13297:HG3_PB_HySA_3067:HG3_PB_SVrefine2Falcon1Dovetail_1266:HG3_PB_SVrefine2PBcRDovetail_1064:HG2_PB_SVrefine2PBcRplusDovetail_5710:HG2_PB_HySA_3792:HG2_PB_PB10Xdip_17790;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_1064;NumExactMatchSVs=1;ClusterMaxShiftDist=0.151786;ClusterMaxSizeDiff=0.151786;ClusterMaxEditDist=0.223214;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=337;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:83841435-83831729;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9854;PctRecOverlap=0.9825;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2849.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:21:34:0|1:18:1:1:24:./.:14:0:0:1:0/1:35:4:0/1:8:42:.:.:.
chr2	84590131	HG2_10X_SVrefine210Xhap12_1547	T	TCAATAGACCCATCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_pbsv_2034:HG2_PB_PB10Xdip_17793:HG4_PB_assemblyticsfalcon_13537:HG4_PB_pbsv_2050:HG2_PB_assemblyticsPBcR_13305:HG3_PB_pbsv_2023:HG3_PB_HySA_3076:HG4_PB_assemblyticsfalcon_13536:HG2_PB_assemblyticsfalcon_13704:HG2_Ill_breakscan11_3186:HG4_PB_SVrefine2PBcRDovetail_1087:HG2_PB_SVrefine2PBcRplusDovetail_5711:HG2_10X_SVrefine210Xhap12_1547:HG2_PB_SVrefine2PB10Xhap12_1576:HG3_PB_SVrefine2Falcon1Dovetail_1269:HG2_PB_SVrefine2Falcon2Bionano_790:HG4_PB_SVrefine2Falcon1Dovetail_1218:HG2_PB_SVrefine2Falcon1plusDovetail_6177:HG2_PB_HySA_3800;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1547:HG2_PB_SVrefine2PBcRplusDovetail_5711;NumExactMatchSVs=2;ClusterMaxShiftDist=0.126657;ClusterMaxSizeDiff=0.126657;ClusterMaxEditDist=0.213371;PBcalls=17;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=342;DistBack=25716;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:84590132-84590146;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2850.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:82:./.:0:4:0:6:./.:0:2:0:6:1/1:0:19:1/1:2:49:.:.:.
chr2	84728741	HG2_PB_SVrefine2Falcon2Bionano_791	T	TAAAAGTTTGGTAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1548:HG2_PB_SVrefine2PB10Xhap12_1577:HG2_Ill_breakscan11_3187:HG2_PB_HySA_3802:HG4_Ill_GATKHCSBGrefine_1379:HG3_Ill_GATKHCSBGrefine_1335:HG2_Ill_GATKHCSBGrefine_1331:HG4_Ill_MetaSV_2632:HG2_Ill_MetaSV_2538:HG3_Ill_MetaSV_2678:HG2_PB_PB10Xdip_17794:HG3_PB_pbsv_2024:HG4_PB_SVrefine2PBcRDovetail_1088:HG2_PB_pbsv_2035:HG4_PB_assemblyticsfalcon_13538:HG2_PB_assemblyticsfalcon_13705:HG2_PB_assemblyticsPBcR_13306:HG4_PB_SVrefine2Falcon1Dovetail_1219:HG2_PB_SVrefine2PBcRplusDovetail_5712:HG2_PB_SVrefine2Falcon2Bionano_791:HG2_PB_SVrefine2Falcon1plusDovetail_6178:HG3_PB_SVrefine2Falcon1Dovetail_1270:HG3_PB_HySA_3077:HG2_PB_HySA_3801:HG4_PB_HySA_3022:HG4_PB_pbsv_2051;NumClusterSVs=26;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6178:HG2_PB_SVrefine2Falcon2Bionano_791:HG2_PB_SVrefine2PBcRplusDovetail_5712:HG4_PB_SVrefine2Falcon1Dovetail_1219:HG4_PB_SVrefine2PBcRDovetail_1088;NumExactMatchSVs=5;ClusterMaxShiftDist=0.129338;ClusterMaxSizeDiff=0.129338;ClusterMaxEditDist=0.223565;PBcalls=18;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=316;DistBack=54878;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:84728742-84728755;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9968;PctRecOverlap=0.959;SizeDiff=1;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=98;MatchId=2851.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:82:1/1:0:19:1:7:1/1:0:6:0:8:1/1:0:23:1/1:2:56:.:.:.
chr2	85540306	HG2_PB_HySA_3814	T	TAAACTAAAAATAGCGGGCGGTGGCTCACGCTGTAATCCAGCACTTTGGGAGGCCGAGGCGGGCGATCACGAGTCAGAGATCGAGACATCCGGCTAAAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTAGTGGCGGCGCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCGGGAGGCGGAGTTGCAGTGAGCCGAGATCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_pbsv_2041:HG4_PB_HySA_3029:HG2_PB_assemblyticsfalcon_13714:HG4_PB_pbsv_2057:HG2_PB_HySA_3814:HG2_PB_SVrefine2Falcon1plusDovetail_6183:HG4_PB_SVrefine2PBcRDovetail_1093;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_3814;NumExactMatchSVs=1;ClusterMaxShiftDist=0.127389;ClusterMaxSizeDiff=0.127389;ClusterMaxEditDist=0.214067;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=293;DistBack=4633;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:85540307-85540321;PctSeqSimilarity=0.9629;PctSizeSimilarity=0.9302;PctRecOverlap=0.9302;SizeDiff=-22;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=94;MatchId=2852.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:37:./.:13:5:12:17:1|0:0:5:20:0:0/1:36:6:./.:.:.:.:.:.
chr2	85994703	HG2_PB_PB10Xdip_17797	T	CCTTCCCTCCCCTGCCCTCCCCTCACTTCCTCCCTCCCTCCCCACTCCCCTCCCCTCTCCTTCCCTCCCCTGCCCTCCCCTCACTTCCTCCCTCCCTCCCTCCCCCCTCCCCTCCCCTCCCCTCCCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1274:HG4_PB_HySA_3032:HG4_PB_pbsv_2060:HG2_PB_assemblyticsfalcon_13717:HG2_PB_SVrefine2Falcon1plusDovetail_6185:HG2_PB_HySA_3816:HG2_PB_PB10Xdip_17798:HG2_PB_PB10Xdip_17797:HG3_PB_HySA_3088:HG2_PB_SVrefine2Falcon2Bionano_797:HG4_PB_SVrefine2Falcon1Dovetail_1226:HG2_PB_SVrefine2PB10Xhap12_1582:HG4_PB_SVrefine2PBcRDovetail_1095:HG2_PB_SVrefine2PBcRplusDovetail_5717:HG3_PB_pbsv_2035:HG2_PB_pbsv_2043;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_17797:HG2_PB_PB10Xdip_17798;NumExactMatchSVs=2;ClusterMaxShiftDist=0.163142;ClusterMaxSizeDiff=0.163142;ClusterMaxEditDist=0.252149;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=166;DistBack=-10;DistForward=9293;DistMin=-10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:85994704-85994702;PctSeqSimilarity=0.9709;PctSizeSimilarity=0.9432;PctRecOverlap=0.9435;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=2853.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:1/1:0:31:0:30:./.:3:3:1:10:0/1:2:7:./.:.:.:.:.:.
chr2	89001141	HG3_Ill_250bpfermikitraw_2691	T	TTGCTCCAGTATTTTGAAACTACATGCTTTTCTTGCTGTTTTTAAATTTTTCTGAACTAGGTTGACCCAAAAGGTTAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_2057:HG4_Ill_manta_489:HG4_Ill_Cortex_1834:HG3_Ill_manta_435:HG3_Ill_Spiral_2151:HG3_Ill_Cortex_1884:HG2_Ill_manta_562:HG2_Ill_Cortex_4376:HG2_Ill_breakscan11_3189:HG4_Ill_GATKHC_3313:HG4_Ill_GATKHCSBGrefine_1401:HG3_Ill_GATKHCSBGrefine_1352:HG2_Ill_GATKHC_3309:HG2_Ill_GATKHCSBGrefine_1351:HG4_Ill_svaba_2550:HG4_Ill_Krunchall_2865:HG4_Ill_250bpfermikitraw_2725:HG4_Ill_150bpfermikitraw_2633:HG3_Ill_svaba_2589:HG3_Ill_Krunchall_2762:HG3_Ill_250bpfermikitraw_2691:HG3_Ill_150bpfermikitraw_2606:HG2_Ill_svaba_2499:HG2_Ill_Krunchall_2732:HG2_Ill_250bpfermikitraw_2705:HG2_Ill_150bpfermikitraw_2497:HG3_PB_assemblyticsfalcon_13794:HG2_PB_assemblyticsfalcon_13725:HG4_PB_pbsv_2076:HG3_PB_pbsv_2046;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2497:HG2_Ill_250bpfermikitraw_2705:HG2_Ill_Krunchall_2732:HG2_Ill_svaba_2499:HG3_Ill_150bpfermikitraw_2606:HG3_Ill_250bpfermikitraw_2691:HG3_Ill_Krunchall_2762:HG3_Ill_svaba_2589:HG4_Ill_150bpfermikitraw_2633:HG4_Ill_250bpfermikitraw_2725:HG4_Ill_Krunchall_2865:HG4_Ill_svaba_2550;NumExactMatchSVs=12;ClusterMaxShiftDist=0.225166;ClusterMaxSizeDiff=0.225166;ClusterMaxEditDist=0.27027;PBcalls=5;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=78;DistBack=-1;DistForward=28086;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:89001140-89001142;PctSeqSimilarity=0.9875;PctSizeSimilarity=1;PctRecOverlap=0.9873;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=2855.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:44:1/1:0:22:1:19:1/1:0:49:1:38:1/1:0:54:./.:.:.:.:.:.
chr2	96862858	HG2_10X_SVrefine210Xhap12_1572	A	CTAAACTAAACTAAACTAAACTAAACTAAACTAAACTAAACTAAACTAAAAACTAAACTAAACTAAACTAAACTAAACTAAACTAAACTAAACTAAAC	20	PASS	ClusterIDs=HG2_PB_pbsv_2079:HG2_PB_HySA_3895:HG2_Ill_SVrefine2DISCOVARplusDovetail_6725:HG2_10X_SVrefine210Xhap12_1572:HG2_PB_HySA_3896;NumClusterSVs=5;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1572;NumExactMatchSVs=1;ClusterMaxShiftDist=0.234234;ClusterMaxSizeDiff=0.234234;ClusterMaxEditDist=0.333333;PBcalls=3;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=97;DistBack=13;DistForward=121182;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=2:96862859-96862862;PctSeqSimilarity=0.9066;PctSizeSimilarity=0.822;PctRecOverlap=0.7395;SizeDiff=-21;StartDistance=20;EndDistance=20;GTMatch=0;TruScore=82;MatchId=2856.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:36:0|1:33:2:1:29:1|0:0:9:12:0:0/1:18:13:./.:.:.:.:.:.
chr2	99030398	HG2_Ill_svaba_2523	T	TTTATAATTTCTTACGCCTGTCTTTACTGCAATCTCTGAACATAAATTGTGAAGATTTCATGGACATTTATCATTTCCCCAATCAATACCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1576:HG4_PB_HySA_3132:HG2_PB_pbsv_2088:HG4_PB_pbsv_2106:HG4_Ill_svaba_2576:HG4_Ill_manta_492:HG4_Ill_GATKHCSBGrefine_1417:HG4_Ill_250bpfermikitraw_2767:HG2_Ill_svaba_2523:HG2_Ill_GATKHCSBGrefine_1367:HG2_Ill_250bpfermikitraw_2749:HG2_PB_HySA_3912:HG2_PB_SVrefine2PBcRplusDovetail_5750:HG4_PB_SVrefine2PBcRDovetail_1115:HG4_Ill_SVrefine2DISCOVARDovetail_1511;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2749:HG2_Ill_GATKHCSBGrefine_1367:HG2_Ill_svaba_2523:HG4_Ill_250bpfermikitraw_2767:HG4_Ill_GATKHCSBGrefine_1417:HG4_Ill_manta_492:HG4_Ill_svaba_2576;NumExactMatchSVs=7;ClusterMaxShiftDist=0.076087;ClusterMaxSizeDiff=0.0434783;ClusterMaxEditDist=0.182796;PBcalls=6;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=90;DistBack=-26;DistForward=59120;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=91;REFWIDENED=2:99030344-99030434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2857.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:0|1:26:1:0:27:1|0:0:5:20:0:0/1:19:30:./.:.:.:.:.:.
chr2	99276598	HG2_PB_SVrefine2Falcon1plusDovetail_6235	A	AGCTACCAAAAAAATACTTAGGAAAAAATTTAACCAAGGAAGTGAAAGAACTAGACACCAAAAATTATTTTAATTTCTGTAATTGAAAGTAATTCTAATTTTTTTAAGTCTAACAACTCATGTGTAAGATAGCTTCATGAGATCAAATCCTTCAAAGTCTTAACAAACTGTGGAGACACAATTGGAATATAGCTCAAAACTCTGTCCTTCCTCTATAGAAGCCCAAACATTAGTGATTTCTTTTTAAATAAATTATCATTCACAAATTTGACCAATGAGTATTTAACCACTCATCAATCTACAATTTTGGAGAATATGAACAAGCATGGTTTTTATGAACTTTACTGTGTTTAACAACCTGACATTCAATTTGATAAGCATTTAATATGAAGGACAGTGATTTGTCCACCTAAGGAAACAGGAATACAAAGGTGAGTAAGACCAGTTCCAGGTCCCTGGCCGTCCAAAACGGAACCAAGAAGAATAAGCTTATGTGAACATAGATTTGTTATGTAATGTGTAATCAAATTTACAAAACAAAGTAATCCACGTGTACTACTACACAAAATCCTATGTTGCCTTCTAGTTCATGTATCTAGTAAAAGATTCACTTAAACAACTGTAATTTGTGTCACTTTACATAAATTACAAATTTAACAAAAGCAAGTTCTAGGAGGGAAGAGAACAAATACCAATCCTTCTCAAACTATTTCAAAAATGTGGAAGAGGAGGGAGTGCTTCCAAACTCTTCTTAATGAGGCCAGTGCCAGTCTGACACCAAAGCCATACAAGGCCATTACAAGAAAAGAAAATTACAGGCCAGTATTTGTGATGAACATACATGCAAAAATCCTCAACAAAATACTAGCATTCAACTACATATTAAAAGGATCATTCACCATGATCAAGTGGGACTTATCCCTGGGATCCAAGAATGGTCCAACATATGCAAATCAATGAATGTGATAACTCACATTACAAAATAAAGGACAGAAACCATACGATCATCTCATTAGATGCAAAAAATGCACTGGACAAAATTCAACATGCTTTCATGGTGAAAAAGTTCTCACTAACTCAGGTACAGAAGGAATGCACCTCAACACAAGAAAGCCATATATATGAGAGACCAACAGCTAATGTTACACTGCGTGGTGAAAAATTAAAGCTTTTCCTTGAATATCTGGAACAAGACAGGGAAGCACACTCTCACAACTTCTATTCAACATAATACTAGAAGTCCCTGACACAGTAATTAGCCAAGATAAAGAAATAAAAGGTATCTAAATAGAAAAAGAAGTGAAATTGTCACTGTTTGCTGATGACATGATCTTATCATACAGAAAACCCTAATGATTCCACTAAAAAACTGTTAGAAGTAATAAATACTGTAAAGTTGTGGATACAAAATCAATATACAAACATAGGTAGCATTTCTATATACTAACAATGAACTATCTGAAAAAGAAATCAAGAGAACAATCCCATTTACAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5751:HG2_PB_pbsv_2090:HG4_PB_assemblyticsfalcon_13594:HG2_PB_assemblyticsfalcon_13751:HG4_PB_pbsv_2108:HG2_PB_PB10Xdip_18001:HG4_PB_SVrefine2Falcon1Dovetail_1249:HG2_PB_SVrefine2Falcon1plusDovetail_6235:HG2_10X_SVrefine210Xhap12_1579:HG2_PB_SVrefine2Falcon2Bionano_807:HG2_PB_SVrefine2PB10Xhap12_1623;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6235;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0284016;ClusterMaxSizeDiff=0.0264201;ClusterMaxEditDist=0.157791;PBcalls=10;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=1494;DistBack=-66;DistForward=53049;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=156;REFWIDENED=2:99276510-99276665;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9953;PctRecOverlap=0.996;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2858.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:35:0|1:42:1:0:25:1|0:0:21:14:0:0/1:19:16:0/1:45:77:.:1329:.
chr2	99546737	HG3_PB_SVrefine2Falcon1Dovetail_1299	G	GCTACCACATCTCCGTCCCCACCCTCTGTACCGTGTCCCCTACCCCATCCCCATCCCCACCCTCTGTACCGTGTCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6236:HG4_PB_assemblyticsfalcon_13596:HG2_PB_HySA_3914:HG3_PB_pbsv_2078:HG2_PB_PB10Xdip_18008:HG2_PB_pbsv_2091:HG3_PB_HySA_3171:HG3_PB_SVrefine2Falcon1Dovetail_1299:HG2_PB_SVrefine2PBcRplusDovetail_5752:HG2_PB_SVrefine2PB10Xhap12_1624:HG2_PB_SVrefine2Falcon2Bionano_808;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6236:HG3_PB_SVrefine2Falcon1Dovetail_1299:HG2_PB_SVrefine2PBcRplusDovetail_5752:HG2_PB_SVrefine2PB10Xhap12_1624:HG2_PB_SVrefine2Falcon2Bionano_808;NumExactMatchSVs=5;ClusterMaxShiftDist=0.102564;ClusterMaxSizeDiff=0.102564;ClusterMaxEditDist=0.25;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=76;DistBack=29994;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=81;REFWIDENED=2:99546736-99546819;PctSeqSimilarity=0.9884;PctSizeSimilarity=1;PctRecOverlap=0.3247;SizeDiff=0;StartDistance=-52;EndDistance=-52;GTMatch=0;TruScore=77;MatchId=2859.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:1:13:0:7:./.:2:0:7:0:./.:7:0:./.:.:.:.:.:.
chr2	99737913	HG2_PB_SVrefine2PBcRplusDovetail_5753	T	TGAAGTATCTCTTCATGTGTTTTGCTCATTTTCTAACTGAATTGTTTGCTTTTCACTATTCAACTTTAAGAGTTCTTCATTTGATACAATAGGTATGAGTCCTTTAGCAAATACGTGGCTTGTAGTTAGTCTTTTCAACATCTTAGCAGGTCTTCTGCAAAGTAAAAGACTAACTACAAACCACGTATTTTCTAAAGGACTCATACCTATTGCATCAAATGAAGAACTCTTAAAATTGAATAGTGAAAAGCAAACAATTCAGTTAGAAAATGAGCAAAACACATGAAGAGATACTTCACA	20	PASS	ClusterIDs=HG2_PB_HySA_3915:HG2_PB_pbsv_2092:HG3_Ill_Spiral_2178:HG3_PB_pbsv_2079:HG4_PB_assemblyticsfalcon_13597:HG4_PB_pbsv_2110:HG4_PB_SVrefine2PBcRDovetail_1119:HG2_Ill_SpiralSDKrefine_8684:HG3_PB_assemblyticsfalcon_13820:HG2_PB_assemblyticsPBcR_13350:HG2_PB_assemblyticsfalcon_13753:HG4_Ill_SVrefine2DISCOVARDovetail_1515:HG3_PB_SVrefine2Falcon1Dovetail_1300:HG4_PB_SVrefine2Falcon1Dovetail_1250:HG4_Ill_MetaSV_2659:HG4_Ill_GATKHCSBGrefine_1419:HG3_PB_SVrefine2PBcRDovetail_1085:HG3_Ill_SVrefine2DISCOVARDovetail_1447:HG3_Ill_MetaSV_2707:HG3_Ill_GATKHCSBGrefine_1368:HG2_PB_SVrefine2PBcRplusDovetail_5753:HG2_PB_SVrefine2Falcon2Bionano_809:HG2_PB_SVrefine2Falcon1plusDovetail_6237:HG2_Ill_SVrefine2DISCOVARplusDovetail_6729:HG2_Ill_MetaSV_2561:HG2_Ill_GATKHCSBGrefine_1369;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1369:HG2_Ill_MetaSV_2561:HG2_Ill_SVrefine2DISCOVARplusDovetail_6729:HG2_PB_SVrefine2Falcon1plusDovetail_6237:HG2_PB_SVrefine2Falcon2Bionano_809:HG2_PB_SVrefine2PBcRplusDovetail_5753:HG3_Ill_GATKHCSBGrefine_1368:HG3_Ill_MetaSV_2707:HG3_Ill_SVrefine2DISCOVARDovetail_1447:HG3_PB_SVrefine2PBcRDovetail_1085:HG4_Ill_GATKHCSBGrefine_1419:HG4_Ill_MetaSV_2659:HG4_PB_SVrefine2Falcon1Dovetail_1250;NumExactMatchSVs=13;ClusterMaxShiftDist=0.12601;ClusterMaxSizeDiff=0.12601;ClusterMaxEditDist=0.299517;PBcalls=15;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=299;DistBack=20205;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=2:99737914-99737920;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2860.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:0:5:0:9:1/1:0:9:0:8:1/1:0:26:1/1:2:48:.:.:.
chr2	102928351	HG4_Ill_GATKHCSBGrefine_1432	A	AATATATATTATATAATATAATATATAATATATAATATATATTATATAATATAATATATAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_2102:HG4_Ill_svaba_2601:HG4_Ill_scalpel_1898:HG4_Ill_GATKHC_3388:HG4_Ill_GATKHCSBGrefine_1432:HG4_Ill_150bpfermikitraw_2696:HG2_Ill_svaba_2549:HG2_Ill_scalpel_1955:HG2_Ill_SpiralSDKrefine_8703:HG2_Ill_GATKHC_3382:HG2_Ill_GATKHCSBGrefine_1380:HG2_Ill_150bpfermikitraw_2549:HG4_PB_pbsv_2119;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2549:HG2_Ill_GATKHCSBGrefine_1380:HG2_Ill_GATKHC_3382:HG2_Ill_SpiralSDKrefine_8703:HG2_Ill_scalpel_1955:HG2_Ill_svaba_2549:HG4_Ill_150bpfermikitraw_2696:HG4_Ill_GATKHCSBGrefine_1432:HG4_Ill_GATKHC_3388:HG4_Ill_scalpel_1898:HG4_Ill_svaba_2601;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.238095;PBcalls=2;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=17;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=414;REFWIDENED=2:102928169-102928582;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2861.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:0|1:21:2:1:26:./.:0:1:2:0:0/1:14:15:./.:.:.:.:.:.
chr2	103066666	HG4_Ill_GATKHCSBGrefine_1434	A	ATGAAAATATAGGATATTTTCAAGGTCTCATATACCTCTGTTGACTATATTATTTTACGTATTATACAAATCATTATTTTATAATATAGTCAACAGAGGCATATGAGACCT	20	PASS	ClusterIDs=HG2_PB_pbsv_2104:HG2_PB_assemblyticsfalcon_13784:HG4_PB_pbsv_2121:HG2_PB_PB10Xdip_16306:HG2_Ill_breakscan11_3194:HG3_PB_HySA_3203:HG3_PB_pbsv_2091:HG4_Ill_SVrefine2DISCOVARDovetail_1533:HG2_PB_SVrefine2PBcRplusDovetail_5764:HG2_PB_SVrefine2PB10Xhap12_1635:HG2_PB_SVrefine2Falcon2Bionano_818:HG4_Ill_GATKHC_3389:HG4_PB_SVrefine2PBcRDovetail_1126:HG4_PB_SVrefine2Falcon1Dovetail_1258:HG4_Ill_manta_499:HG4_Ill_MetaSV_2667:HG4_Ill_GATKHCSBGrefine_1434:HG3_PB_SVrefine2Falcon1Dovetail_1309:HG3_Ill_manta_445:HG3_Ill_Spiral_2199:HG3_Ill_SVrefine2DISCOVARDovetail_1462:HG3_Ill_MetaSV_2715:HG3_Ill_GATKHCSBGrefine_1380:HG3_Ill_250bpfermikitraw_2763:HG2_Ill_manta_575:HG2_Ill_SVrefine2DISCOVARplusDovetail_6745:HG2_Ill_MetaSV_2569:HG2_Ill_GATKHCSBGrefine_1381:HG2_10X_SVrefine210Xhap12_1595:HG2_PB_SVrefine2Falcon1plusDovetail_6248:HG2_PB_HySA_3950;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1595:HG2_Ill_GATKHCSBGrefine_1381:HG2_Ill_MetaSV_2569:HG2_Ill_SVrefine2DISCOVARplusDovetail_6745:HG2_Ill_manta_575:HG3_Ill_250bpfermikitraw_2763:HG3_Ill_GATKHCSBGrefine_1380:HG3_Ill_MetaSV_2715:HG3_Ill_SVrefine2DISCOVARDovetail_1462:HG3_Ill_Spiral_2199:HG3_Ill_manta_445:HG3_PB_SVrefine2Falcon1Dovetail_1309:HG4_Ill_GATKHCSBGrefine_1434:HG4_Ill_MetaSV_2667:HG4_Ill_manta_499:HG4_PB_SVrefine2Falcon1Dovetail_1258:HG4_PB_SVrefine2PBcRDovetail_1126;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0977778;ClusterMaxSizeDiff=0.0977778;ClusterMaxEditDist=0.222222;PBcalls=14;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=110;DistBack=16207;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=2:103066667-103066675;PctSeqSimilarity=0.991;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2862.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:26:0:33:./.:4:51:4:66:0/1:11:29:./.:.:.:.:.:.
chr2	105440808	HG3_PB_SVrefine2Falcon1Dovetail_1313	A	AGTGGTGGTGATTGTGGTGGTGGTGCTGGGGGTGTGTGGTGGTATGGTGAGTGGTGGGTGGTGGTGTGGTAGTGATGGTGTGATGTGGTGGTGGTGGTGGTGGATGGTGGTGGTGGTGGTGGTGGTATGTGGTGTGATGGTGGTGTGTGTGTGATGTGGTGGTGGTGATGGTGGTGATGGTGATGGTGTGGTGTGATGGTGGTGGTGGGTGGTGATGGTGGTGATGGTGGTGGTGGTGATGGTGGTGGTGTGTGTAGTGGTGGTGGGTGTACGGTGGTGGTGCTGGTGGTGTGATGATGGTGGTGGCTGGTGGTGGTATGATGGTGTGGTGACGGTGGTGGATGATGGTGGTGGTGATGGTGGTGGTGACGGTTGGTGACATGGTGGTGACAGTGATGATGATAGTGGTGATAATGGTAGTGTGATGATGGTGGTGTGGGATAATGGTGGTGATGTCATGATGGTGACAGTGGTGCGACGCGTGTGGTGTGAAGGTGGCAGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTAGTAGGTGGTGGTGGTGGTGGTGGTGGTAGTGATGGTGGTGATGTGGTGGTGGTGGTGTGATGGTGGTGGTGGTGGTGGGGATGGTGGTGGTGGTGGTGGTGTTGATGGTGGTGATGGTGGTGGTGGTGATGTGGTGGTGGTGATGTGGTGTGGTGTGGTTGTGGTGATGGTGGTGTGATGGTGGTGACGGTGGTAGTGGTGGTGGTGACGTGGGTGGTGGTGATGGTGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTAGTGATGGTGTGATGGTGGTGGTGGTTGGTGGTGGTGATGGGTGTGGTGGTGTGGTGGGTGGTGATGGTGGTAGTGGTGGTGGTGGTGGTGGTAGTGATGGTGGTGATGGTGGTGGTGGTGGTGTGATGGTGGTGGTGGTGGTGGTAGTGATGTGGTGATGTGGTGGTGGTGATGGTGGTGTGGTGATGGTGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTAGTGATGGTGGTGATGGTGGTGGTGGTGTGGTGTGGTGATGGTGGTGGTGGTGGTGGTGTAGTGATGGTGGTGATGGTGGTGGTGGTGATGGTGTGGTGGTGATGGTGGTGGTGGTGGGTGATGGTGGTGGTGGTGGTGGTGATAGGTGGTGATGGTGATGGTGGTGGTGGTGATGGTGGTGGTGGTGGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGACGGTGGTATGTGGTGGTGGTGACGGTGGTGGTGGTGGTGTGTGCTGGTGGTGGTGCTGTGGTGGTGATGGTGGTGATGGTGACGGTGGTGGTGATGATGGTGTGGTGATGGTGGTGGTGACGGTGGTGGTGACAGTGGTGGTGACAGTGATGATGATAGTGGTGATAATGGTAGTGGTGATGATGGTGGTGGTGGGGATAATGGTGGTGATTCATGATGGTGACAGTGGTGGCGACGGTGGTGGTGGTGAAGGTGGCAGTGATGGTGGTGTGATGGTGGTGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTAGTGGTGGTGGTGATGGTGGTTGGTGATGGTGGTGGTGGTGTGGATGGTGGTGATGGTGGTGGTGATGGTGGTGACGGTGGTAGTGGTGGTGGTGACGGTGGTGGTGGTTGGTGGTAGTGGTGGTGGTGGTGGTAGTGATGGTGGTGATGTGGTGGTGGTGGTGGTGATGGTGGTGGTGTGGTTGGTGGTAGTGATGGTGGTGATGGTTGTGGTGATGGTGGTGGTGGTGATGGTGGTAGTGTGGTGGTGGTGTGGTGGTGGTAGTGATGGTGGTGATGGTGGTGGTGGTGGTGGTGTGATGTGGTGTGTGTGGTGTAGTGATGGTGGTGATGGTGTGTGGTGATGGTGGTGGTGGTGATGGTGGTGGTGTGGTGGGATGGTGGTGGGTGTGGTGATGGTGGTGATGGTGATGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGTGATGGTGGTGTGATGGTGGTGACGGTGGTAGTGGTGGTGGTGACGGTGGTGGTGTGGTGGTGATGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGTGGTGATGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGACGGTGGTGGTGGTGTGGTGGTGACGGTGGTGGTGGTGGTGGTGCTGGTGGTGGTGCTGGTGGTGGTGATGGTGGTGATGGTGGTGGTTGGTGATGATGGTGGTGGTGACGGTGGTGGTGATGATGTGGTGTGGTGATGGTGTGGTGACGGTGGTGGTGACAGTGGTGTGACAGTGATGATGATAGTGGTGATAATGGTAGTGGTGATGATGGTGGTGGTGGGGATAATGGTGGTGATGGTCATGATGGTGACAGTGGTGGCGACGGTGGTGGTGGTGAAGGTGGCAGTGATG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1313:HG2_PB_SVrefine2Falcon1plusDovetail_6251:HG2_PB_pbsv_2108:HG2_PB_SVrefine2PBcRplusDovetail_5768:HG4_PB_SVrefine2Falcon1Dovetail_1262:HG2_PB_SVrefine2Falcon2Bionano_821;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1313;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0595778;ClusterMaxSizeDiff=0.0595778;ClusterMaxEditDist=0.206747;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2458;DistBack=27695;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=249;REFWIDENED=2:105440809-105441057;PctSeqSimilarity=0.9632;PctSizeSimilarity=0.9527;PctRecOverlap=0.9155;SizeDiff=-122;StartDistance=-157;EndDistance=-157;GTMatch=0;TruScore=94;MatchId=2863.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:57:./.:0:0:0:0:./.:5:5:11:17:0/0:8:0:./.:17:223:.:2674:.
chr2	105632252	HG2_10X_SVrefine210Xhap12_1600	A	AAAGTTAGTATTGAGATATGAGGTACTATTCCATTAATTGTGCTATTTGTTACCTGTATACCTTGTGGGTTTTTTATTGTATTTTTGTTTTATAGGTCCTGTGAGATTAATGCTTTAAACAGGTTCTGTTTCCAGGATTTGTTTCAAGATTTAGAGCTCCTTTTAGCAGTTCTTGTAGTGCTGGCTTGGTAGTGGTGAGTTCTCTCAGCATTTGTTTATCTGAAAAAGACTGTATCTTTCCTTCACTTATGAAGCTTAGTTTTGCTGGATACAAAATTATTGGCTGATAATTGTTTTGTTTAAGGAGGCTGAAGATAGGGCCCCAATTCCTTCTAGCTTGTGGGGTTTCTGCTGAGAAATCTACTGTTAATCGGATAGGTTTTCTGGTAGTTTTGACTCACAGCTCTTAAGATTCTTTCCTTCATCTTAACTTTAGATAACCTGATGACAATGTGCCTAGGCAATGACTTTTGCAATGAATTTCCCATGTGTTCTTTGAGCTTCTTATATTTGGATGTCTAGGTCTCTAGCAAGGCTGGGTAAGTTTTCCTCAATTAGTCCCCAAAATATGTTTTCCAGTTATTCTTAGGTTTAGTTGTTTAACATAATTCCAGACTTCTTGGAGGCTTTGTTAATTTTCTCTTATTCTTTCTTCTTTGTCTTTGTTGGATTGGGTTAATTCAAAAACCTTGTCTTCAAGCTCTGAACTTCTTCCTTCTACTTGTTCAATTTTATTGCTGAGACTTTCCAGAGCATTTTGCATTTCTCTAAGTGCATCCATTATTTTCTGAAGTTTTGATTGTTTTTTATTTATGTTATCTCTTTCACTGAAGATTTCTCCCTCATTTCTTGTATCATTGTTTTGATTTCCTTAAATTGGACTTCACCTGCAAGCAAGGTACCTCCAAGCAAGGTGCCTTCTTGCTTAGCTTAATAACCGACCTTCTGAATTCTTTTTCAGGTAAATTGGAGATTTCATCTTGGTTTGGATCCATTGCTGGTGAGCTGGTGTGATTCTTTTGGGGGTGTTAAGGAACCTTCTTTTGTCATATTACCAGAATTGTTTTTCTGGTTCCTTCTCATTTGGGTAGGCTCTGTCAGAGGGAAGGTCTGGGGCTCAAGGCTGCTGTTTAGATTCTTTTGTCCCACAGGACAAAATGTAATACTTAACGTAATACTCTCTCCGTTTTCCTAGGGATGTGTTCCTGAGAGCTGAGCTGTAGTGACTGTTATCTCTCTTCTGGATCTAGCCACCCAGCAGGCCTACCAGGCTCTGGGCTTGTACTGGGGGTTGTCTGCACAGTCTTGTGATGTGAACCATTTGCAGATCTCTCGGCCATGGATACCGGCACAGTATTTGGGGTGTCTCCTGTGTCCTGCAGGAGCAATCTGCTTCCTTCAGAGGGTCTGTGAGTTCTCTCAGCTTTCCTGGTTTATTTCTGCAGTAGTTCTGGAGCAAAAGTTCACGATGCAAGTCTCCCCACACTGCTCTGTCCATCTCTGTGGGAGCTGCAATCCAGATATGCACAAACACTTTCAAGAAGCAAGATTTAAAGCAGGCCCTAAGAGATTTAAATAGGTTGGTAAAGAAGGGAATTTCTGGTAGACTGAGCTGGTTGAACAAATGCACAGATTTGGAAATATTTATAGGTGGTCTTGAAAAGCAGTATCCCTTCTTCCAGGTCTCTTAAGTTTTGCTCCATGGATATTCAGATTTGCAGTCATATTTCTAATATCAAGTATAATTATTAAATGTGAGTCTATGTTTGAGTATCTTTATTCTTTGGAGGACACTAGTCTTTTTATAGGTACTGAAATGTTTATGCAACAAACAGTATATGATCTGTTTATTTATCTGTAGGAACCTAGTCCCTCAGGAATTTCCTTTAAACTGAAGATGCTTTCAAGAGGGTTAAGTAGACTAGTGGTTTCCTTGGCTCTGAAGGTACACTTGTAGCTTCCCTCAGGTACTCAAAGAACTCTAATATAAAGTTTACTTTTTCAATTATATAAGAATCACATGTTCAGATAATATATTTACAATATATAGGAAGAAGAAAAAGTCTTTGATATTCATGCCACACTAAGC	20	PASS	ClusterIDs=HG2_PB_HySA_3963:HG2_PB_pbsv_2110:HG3_PB_pbsv_2098:HG2_PB_PB10Xdip_16308:HG2_Ill_breakscan11_3195:HG2_PB_SVrefine2PB10Xhap12_1639:HG2_PB_SVrefine2Falcon1plusDovetail_6252:HG2_PB_SVrefine2PBcRplusDovetail_5770:HG2_PB_SVrefine2Falcon2Bionano_822:HG2_10X_SVrefine210Xhap12_1600;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1600:HG2_PB_SVrefine2Falcon2Bionano_822:HG2_PB_SVrefine2PBcRplusDovetail_5770;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0265152;ClusterMaxSizeDiff=0.0265152;ClusterMaxEditDist=0.148339;PBcalls=8;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=2088;DistBack=6647;DistForward=2504;DistMin=2504;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:105632253-105632254;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2864.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:42:0|1:13:3:1:20:1|0:0:15:40:0:0/1:30:28:0/1:70:162:.:1998:.
chr2	106585610	HG2_Ill_MetaSV_2572	T	TAAATCCTCCTAAATTAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_3976:HG4_PB_pbsv_2133:HG3_PB_assemblyticsfalcon_13869:HG4_PB_assemblyticsfalcon_13641:HG2_Ill_breakscan11_3196:HG3_PB_HySA_3224:HG2_PB_SVrefine2Falcon1plusDovetail_6257:HG2_PB_assemblyticsfalcon_13812:HG2_PB_SVrefine2PBcRplusDovetail_5774:HG3_PB_pbsv_2105:HG2_PB_SVrefine2PB10Xhap12_1641:HG2_PB_SVrefine2Falcon2Bionano_825:HG4_Ill_MetaSV_2671:HG4_Ill_GATKHCSBGrefine_1442:HG2_Ill_MetaSV_2572:HG2_Ill_GATKHCSBGrefine_1390:HG2_10X_SVrefine210Xhap12_1606:HG4_PB_SVrefine2Falcon1Dovetail_1266:HG2_PB_PB10Xdip_16310:HG4_PB_HySA_3171:HG3_PB_SVrefine2Falcon1Dovetail_1319:HG2_PB_pbsv_2116;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1606:HG2_Ill_GATKHCSBGrefine_1390:HG2_Ill_MetaSV_2572:HG4_Ill_GATKHCSBGrefine_1442:HG4_Ill_MetaSV_2671;NumExactMatchSVs=5;ClusterMaxShiftDist=0.17134;ClusterMaxSizeDiff=0.17134;ClusterMaxEditDist=0.302738;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=316;DistBack=11392;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:106585611-106585627;PctSeqSimilarity=0.9784;PctSizeSimilarity=0.9576;PctRecOverlap=0.9577;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=2865.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:76:1/1:1:26:1:18:./.:0:5:0:9:1/1:0:18:1/1:1:58:.:.:.
chr2	109852432	HG4_PB_SVrefine2Falcon1Dovetail_1276	T	CTTACTTTAAGAGGCTGTGGGGTTGGTTTCACCTTGACCTATTATAATATGCATGCTCACTGCCCTTACTTTAAGAGGCTGTGGGGTTGGTTTCACCTTGACCTATTATAATATGCATGCTCACTGCCCTTACTTTAAGAGGCTGTGGGGTTGGTTTCACCTTGACCTATTATAATATGCATGCTCACTGCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_832:HG4_PB_assemblyticsfalcon_13670:HG4_PB_SVrefine2Falcon1Dovetail_1276:HG2_PB_pbsv_2128:HG4_PB_HySA_3201:HG4_PB_pbsv_2149;NumClusterSVs=6;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_1276:HG4_PB_assemblyticsfalcon_13670;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0663265;ClusterMaxSizeDiff=0.0510204;ClusterMaxEditDist=0.22335;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=192;DistBack=36150;DistForward=104;DistMin=104;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=193;REFWIDENED=2:109852358-109852550;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9948;PctRecOverlap=0.9896;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2866.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:32:3:2:22:./.:9:0:3:7:0/1:17:7:./.:.:.:.:.:.
chr2	110873056	HG2_Ill_GATKHC_3446	T	TCTCGGTCCGGTCTGGGTCTCTCTCGGCGCGGTCCGGTCTGGGTCCGAGGCCGGTCTCCCCCCCCCCCTCTCTGCAGGTGGCCCCTGTGCTCGCTCCC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6777:HG2_PB_pbsv_2133:HG2_PB_HySA_4011:HG3_PB_HySA_3264:HG3_PB_pbsv_2118:HG2_PB_PB10Xdip_16334:HG4_PB_HySA_3207:HG4_Ill_GATKHC_3456:HG3_Ill_GATKHC_3553:HG2_Ill_GATKHC_3446:HG4_PB_SVrefine2Falcon1Dovetail_1279:HG4_PB_SVrefine2PBcRDovetail_1138:HG2_PB_SVrefine2PB10Xhap12_1652;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHC_3446:HG3_Ill_GATKHC_3553:HG4_Ill_GATKHC_3456;NumExactMatchSVs=3;ClusterMaxShiftDist=0.104167;ClusterMaxSizeDiff=0.0923077;ClusterMaxEditDist=0.263959;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=97;DistBack=-168;DistForward=31;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=208;REFWIDENED=2:110873035-110873242;PctSeqSimilarity=0.9949;PctSizeSimilarity=0.9898;PctRecOverlap=0.9798;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2868.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:./.:0:1:0:0:./.:0:0:0:0:0/1:2:9:./.:.:.:.:.:.
chr2	112009177	HG4_PB_pbsv_2158	A	AAGACCGCCACCACCGATCACCACCACGCATCACCACCAACACCATCACCACCACCACCGACCATCACCACCACCACCCACACGCATCAACGCACCACCACCACCATCACTGGCAACACACCCATCACCAATCACAAATCACCACCACCACCATCACCGACCATCACCACACCACCACACCAACACCACCACCATCACCACCACACCCCACCACCATCACCACCAACCATGCACTCACCATCAGCCATCTGACCGTCACCATCACAGCCACCACCGTCACCACACCCGACCAACCACTTATCGATGCACCACCACCACCACCATGAGAACCACCACCACCACACCACACCATCAACCCACCACACCATCACCATCATCACAACACCAATCACACCACCAGCATCCTCACCACCACTCATCGACCACATCATCAGCCACCACCACCATCACCATGCATCATGCCAGTCCGACCACCATCACCACCACCAACCACAGTCACTGCCACCACCACCACCATCACGCATCACCACCACCACCACCCACCATCACCGGCGCACCACCACCACCAACACCACACTCCCCCACACCACCACCACCACATCACCTACCGACCTCACCCGACCATGCTACCGCACTACGTCACCATCACCCACACGTACCGTCACACCACCACCACAATCATCAACCACCACCACACCCATGACTGACCACCACACCACCATCCCACAACCGACCATCACAATCAATCACCAGCACCTCACCATCACGCATCATCACTTGGGCCACCACCACCGACCATCCCATCACCACACCATCAACCACCGATCATCACACCACCATCAGTCACCACCACGCATCACCACCACCGCCACCATCAAAAATACCACGCCACCATCACAACGCCGTTCCACGATCACCACACCACCATCACAACACCACATCACGATCACCACCAACCACCCCACCGATCACCCACCATCATCAACCAACACCACCATGCAGCCACACCACGGTCCCCACATCACCACACCACCGTCACCACCACCACCATCATCAACGCACACCACCACCATCACCATCTAACGATGACCCGCACCACCACCGATAACCACCACTCATCTTGCCACCACCACCAATCACCACTCACGCATCACACACCACCACCATCACCACCACATCACCACCGACCGACCATCACACCATCATCACATCACCACATCACCACCACCAGCCAGCATCACCACACACATCAGCCGACCATCACCACACCACCACCATCACCATCACCATCACCCGACACATCATCACCACCACCACCATCACGCATCATCACTGCCACCGACCCACACATCACCATCCACCACCATACCATCCCAACCAGGATCATCACGCCACCACCATCATTTCAACCACCTGACCACACAACCCGATCACCATCACCACCAACCACTCACCACCATTCACCACCTGCCACCATCACCACTCTGCCACCATCACCACACACCATCACCACCACACATCATCACCACCATTCACACGCCACCTGTCACCACCACCACAACCAGATCAAATCACCTACCACCAACACCACCAATCAACACCACGCCCACCATCAGCCACTATCACATCATCCCATAACCACCACCATCACACCACCACCATCACCACCACCGGCCCACCATCACCGCACTGCACCAATCAACCACCCGCCATCAACACTTACTGCCACCATAACCACTGCCACCATCATCCTACCACAACTACCACCGTCCATCACCACGACCACCATGACGACCACCACCACCGACCACCGACCATACCACCATCACCATCATCACCACTATCACCAACCACCAACCACCCCCTTCACTGCAATGACCATCACCAGCACTCACCATCACCTACCTACACCATCACCACCTGCCAACCATCACCACCACACCATACACGGTATCACCAACCGCACATCACACCGCCACCAGACCATCCCCGCTCGCCACATCGCACCGCCACCATACACCAACACCAGCCACGACACACATCGCACCATCAACACCACACCACCAGCACACCACTATCACAACCATCACCACCACCGATCATCACACACCACCTATCGACCACCATCACCACGCACCACCACGCGACCATCAGCCACCATCATCACCATCACACCACGACCATCACCATCACCACACCACCATCACCACATCATCACCACCATACCATCATCACACCCACCACCGACAACCACCACCGCACATCACCACCTCCACATCACATCACCACCACCACGCATCACCATTACACCACCACCATC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1283:HG4_PB_pbsv_2158:HG2_PB_SVrefine2PB10Xhap12_1655:HG2_PB_pbsv_2139:HG2_PB_SVrefine2Falcon1plusDovetail_6268:HG4_PB_SVrefine2PBcRDovetail_1142:HG2_PB_SVrefine2PBcRplusDovetail_5784:HG3_PB_pbsv_2123:HG3_PB_SVrefine2Falcon1Dovetail_1331;NumClusterSVs=9;ExactMatchIDs=HG4_PB_pbsv_2158;NumExactMatchSVs=1;ClusterMaxShiftDist=0.201183;ClusterMaxSizeDiff=0.19645;ClusterMaxEditDist=0.285444;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=2319;DistBack=58;DistForward=32220;DistMin=58;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=2:112009178-112009178;PctSeqSimilarity=0.9263;PctSizeSimilarity=0.9728;PctRecOverlap=0.9521;SizeDiff=63;StartDistance=80;EndDistance=80;GTMatch=1;TruScore=95;MatchId=2869.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:0:20:2:28:./.:5:0:4:0:0/1:15:3:0/1:12:86:.:2149:.
chr2	112447422	HG3_Ill_GATKHCSBGrefine_1403	T	TCCCAAATGATTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGTGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCAGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCATCACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3197:HG3_PB_pbsv_2124:HG2_PB_pbsv_2141:HG4_PB_pbsv_2160:HG2_PB_HySA_4025:HG2_PB_assemblyticsfalcon_13853:HG4_PB_assemblyticsfalcon_13678:HG4_PB_HySA_3225:HG4_Ill_MetaSV_2680:HG3_PB_SVrefine2Falcon1Dovetail_1332:HG2_PB_SVrefine2Falcon1plusDovetail_6271:HG4_Ill_GATKHCSBGrefine_1463:HG3_Ill_MetaSV_2725:HG3_Ill_GATKHCSBGrefine_1403:HG2_PB_SVrefine2PBcRplusDovetail_5788:HG2_PB_SVrefine2Falcon2Bionano_835:HG2_Ill_SVrefine2DISCOVARplusDovetail_6783:HG2_Ill_MetaSV_2582:HG2_Ill_GATKHCSBGrefine_1402:HG4_PB_SVrefine2Falcon1Dovetail_1284:HG2_PB_HySA_4024:HG3_PB_SVrefine2PBcRDovetail_1098;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1402:HG2_Ill_MetaSV_2582:HG2_Ill_SVrefine2DISCOVARplusDovetail_6783:HG2_PB_SVrefine2Falcon2Bionano_835:HG2_PB_SVrefine2PBcRplusDovetail_5788:HG3_Ill_GATKHCSBGrefine_1403:HG3_Ill_MetaSV_2725:HG4_Ill_GATKHCSBGrefine_1463;NumExactMatchSVs=8;ClusterMaxShiftDist=0.125382;ClusterMaxSizeDiff=0.125382;ClusterMaxEditDist=0.190184;PBcalls=14;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=328;DistBack=40956;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:112447423-112447436;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2870.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:./.:0:11:0:2:1/1:0:6:0:7:1/1:0:38:1/1:2:55:.:.:.
chr2	113001592	HG2_PB_SVrefine2Falcon2Bionano_839	T	TAAAGAAAAAAGATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1336:HG2_PB_pbsv_2148:HG3_PB_pbsv_2132:HG4_PB_HySA_3243:HG3_PB_HySA_3287:HG2_PB_assemblyticsfalcon_13863:HG2_PB_assemblyticsPBcR_13446:HG2_PB_HySA_4039:HG2_Ill_breakscan11_3199:HG4_PB_pbsv_2167:HG2_PB_SVrefine2Falcon1plusDovetail_6276:HG2_PB_SVrefine2PBcRplusDovetail_5793:HG2_PB_SVrefine2Falcon2Bionano_839:HG3_PB_SVrefine2PBcRDovetail_1100;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_839:HG2_PB_SVrefine2PBcRplusDovetail_5793;NumExactMatchSVs=2;ClusterMaxShiftDist=0.171875;ClusterMaxSizeDiff=0.171875;ClusterMaxEditDist=0.25;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=5330;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:113001593-113001606;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2871.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:95:./.:0:1:0:0:./.:0:1:0:2:1/1:0:25:1/1:1:55:.:.:.
chr2	113842556	HG3_Ill_SVrefine2DISCOVARDovetail_1496	T	TGTGAAGGTTTCTTGTTTTGGTGTCTATTGGTAGGTGTCTCTACTAATGAGTG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_2618:HG2_PB_pbsv_2152:HG3_PB_HySA_3299:HG3_PB_pbsv_2138:HG4_Ill_svaba_2654:HG4_PB_pbsv_2172:HG3_PB_SVrefine2PBcRDovetail_1104:HG3_Ill_svaba_2703:HG3_Ill_SVrefine2DISCOVARDovetail_1496:HG3_Ill_Krunchall_2903:HG3_Ill_GATKHC_3573:HG3_Ill_GATKHCSBGrefine_1408:HG3_Ill_250bpfermikitraw_2832:HG3_Ill_150bpfermikitraw_2737:HG2_Ill_svaba_2611:HG4_PB_HySA_3257:HG2_PB_HySA_4050:HG4_Ill_Krunchall_3001:HG4_Ill_GATKHC_3477:HG4_Ill_GATKHCSBGrefine_1466:HG4_Ill_250bpfermikitraw_2855:HG2_Ill_Krunchall_2873:HG2_Ill_GATKHC_3461:HG2_Ill_GATKHCSBGrefine_1406:HG2_Ill_250bpfermikitraw_2842;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_svaba_2611:HG3_Ill_150bpfermikitraw_2737:HG3_Ill_250bpfermikitraw_2832:HG3_Ill_GATKHCSBGrefine_1408:HG3_Ill_GATKHC_3573:HG3_Ill_Krunchall_2903:HG3_Ill_SVrefine2DISCOVARDovetail_1496:HG3_Ill_svaba_2703:HG3_PB_SVrefine2PBcRDovetail_1104:HG4_Ill_svaba_2654;NumExactMatchSVs=10;ClusterMaxShiftDist=0.126126;ClusterMaxSizeDiff=0.0900901;ClusterMaxEditDist=0.347826;PBcalls=7;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=0;DistForward=10530;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=55;REFWIDENED=2:113842557-113842611;PctSeqSimilarity=0.9906;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2873.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:27:3:2:26:1|0:1:34:28:0:0/1:20:26:./.:.:.:.:.:.
chr2	114737558	HG3_PB_SVrefine2Falcon1Dovetail_1340	C	CCCTGGCTGCCCCCTGGTGGCCGGAGGCCGTTACTGTCGCGGCTGAGGGGCGTCCCGGTGTATCCGCAGCGCGCCCTGGCTGCCCCTTGGTGGCCGGAGGCCGTTACTGTCGCGGCTGAGGGGCGTCCCGGTGTATCCGCAGCGCG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1112:HG3_PB_assemblyticsfalcon_13930:HG3_PB_SVrefine2Falcon1Dovetail_1340:HG2_PB_SVrefine2Falcon1plusDovetail_6287:HG2_PB_SVrefine2Falcon2Bionano_845:HG3_PB_pbsv_2145;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1340;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0936455;ClusterMaxSizeDiff=0.0735786;ClusterMaxEditDist=0.226667;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=145;DistBack=51;DistForward=14058;DistMin=51;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=381;REFWIDENED=2:114737182-114737562;PctSeqSimilarity=0.9816;PctSizeSimilarity=0.9797;PctRecOverlap=0.3356;SizeDiff=-3;StartDistance=97;EndDistance=97;GTMatch=0;TruScore=76;MatchId=2875.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:0|1:17:3:1:21:./.:9:0:4:1:0/1:22:10:./.:.:.:.:.:.
chr2	115833866	HG2_Ill_MetaSV_2588	T	TGAGATCCTTTTTCTTTCTTTTTTTTTTTTTTCCGAGACGGAGTCTCGCTCTGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCGCTGCAAGCTCTGCCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGCGCTCGCCACCACGCCCGGCTAATTTTTTCTATTTTTTAAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTTCCGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3200:HG3_PB_pbsv_2150:HG3_PB_assemblyticsfalcon_13940:HG2_PB_pbsv_2168:HG3_PB_HySA_3328:HG3_PB_SVrefine2Falcon1Dovetail_1345:HG2_PB_SVrefine2Falcon1plusDovetail_6291:HG3_Ill_GATKHCSBGrefine_1415:HG2_Ill_MetaSV_2588:HG2_Ill_GATKHCSBGrefine_1415:HG2_PB_HySA_4087;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1415:HG2_Ill_MetaSV_2588:HG3_Ill_GATKHCSBGrefine_1415;NumExactMatchSVs=3;ClusterMaxShiftDist=0.129952;ClusterMaxSizeDiff=0.129952;ClusterMaxEditDist=0.218845;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=42417;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:115833867-115833880;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2876.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:41:0|1:33:2:1:30:0|1:28:0:0:15:0/1:29:14:0/1:5:22:.:.:.
chr2	116196886	HG3_PB_SVrefine2Falcon1Dovetail_1347	TG	ATGGAGCACAGTGTGGAATAGTGGCTAAGATGGTCATGGGAAGCACAGTGTGGAATAGTGGCTAAGATGGTCATGGAGCACAGTGTGGAATAGTGGCTAAGATGGTCATGGAGCACAGTGTGGAATAGTGGCTAAGATGGTCATGGAGCACAGTGTGGAATAGTGGCTAAGATGGTCATGGGAGCACAGTGTGGAATAGTGGCTAAGATGTCATGGGGGAGCACAGTGTGGAATAGTGGCTAAGATGGTCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5811:HG2_PB_SVrefine2PB10Xhap12_1674:HG2_PB_HySA_4091:HG3_PB_assemblyticsfalcon_13944:HG3_PB_SVrefine2Falcon1Dovetail_1347:HG4_PB_SVrefine2Falcon1Dovetail_1301:HG2_PB_SVrefine2Falcon1plusDovetail_6292:HG3_PB_pbsv_2153;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1347:HG3_PB_assemblyticsfalcon_13944;NumExactMatchSVs=2;ClusterMaxShiftDist=0.331797;ClusterMaxSizeDiff=0.331797;ClusterMaxEditDist=0.388889;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=249;DistBack=265;DistForward=20607;DistMin=265;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=618;REFWIDENED=2:116196272-116196889;PctSeqSimilarity=0.9476;PctSizeSimilarity=0.8675;PctRecOverlap=0.228;SizeDiff=33;StartDistance=176;EndDistance=177;GTMatch=0;TruScore=68;MatchId=2877.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:66:./.:21:9:0:23:0/0:18:0:7:0:0/0:18:0:./.:.:.:.:.:.
chr2	116695720	HG2_PB_SVrefine2PB10Xhap12_1675	C	CAGCAAGGGTTGCACAATGAGTTTTGACATGCCTGCATTCCAGAGATGTATAGAAATTCTAGTTACTTAGAAATTCTTGGGAAAGAAGCCTGTACTAGATATGGCTTTAAATAATAGGGAAGTTTAATTACCTCTGAATTCTTCAGATAAGGGGTCTTGCCTCAGAGGGTCTGCTTGATGGCCACCAGGTGATATTTTCTCTTCTCAGAAACATCAAGGATAAGGGGTTTCTAGCTAAATTGACTTGACAGAACCATGCTGAAGGCAAAGCAGAGTGATAAGGTATCTAGAGTAATTACATACCAAGCATGGGAGATTCTCCCTAAATTGCCTTACCAAGATTTTTGCTTGAACTGTATTCTATAAGGACAGAAAAGGAAGCCTGAGGTCAGACCTAGTCAAGTAGAGGACTCAGAGGAGCTCAATTAAAGGTTCTATCCAAAGAAGAGAGTCTTTGTAAGCACATATGTAAACTTCCAGTTTCTAGTTGTCATATTAAAAAGAAACAGGTAAATTAATTTTAATAGTATATATACTTAACATATCCAAGCTTTTTTAATTTCAAGATTCAATTAATATAAAAATTATGAGATATTTTACAAATTTTTTGTACAAAGTCTTTGAAAGCTTGTGTGTGAATTATAATTATGTCATGTCTCAATTTGGACTAGTCACATTTCAAGGACTCAAGAGCCAACATGACCAGTGGCTACCATGTTGGACAGCAGGTCTGTGCGACATCTGGACACAAAATTCAAGGATAAAAGTGCTGCTTTTCTCAGACCCAATAAAACACTTATTGCTCAGGTGGCATTTCTATAATACAGTGATGAATATTCTATAATTCTATGATTATAACTCACAGTGGATAATGCCTTTTTCTAAAATGAATTGCTTACGTTTAGGCACTACGTCCACCGCTCGGCACTGCATATCTTGGAATTGTCTCAACTTACTCCTTGGCATCTGTAGAAGGATACAGTGACGTTTATTGCTTGTAGGACATGATTTGTTTGGCACTGAATAGGTAAACAATAACAGAAAGTATGGATGGTATAAATTTTAAGTGATGTTTGCAATATGCATTTGGGAGTTTTTAGAATGGGAGCAAAATTTGCTCTTTTTTTTTTTTCCACATGCTTTAATCTATTTGTTGAGATAGCTTCATGGCTACAAAGAATACTGCAAAAATATTTGGTAGAGCATCCTCTTCTCTTCTACAAATGTTTCTTGATAATCAGTAGCAAAAAAGCAGAGGTGGGGGAACCATGTTTTAATGGTGCCAATTTCTTTGTTGTTTTTCTGGTCAGTGCCTGCTGCAAAGAATATAGAAGTGCATGGGTTCCAGATAGCTGTTCTGGGCATAAAACTATTCTACTCTACATCCTGGGAAGAGACCAGTCTCAATTAATCCTATATAGCCATAAAGCATTAATAAAACATTTGAAACTGGAATGCCAGTTCCTGTAATGCTTACAGAGACCAAAGTTAATCACTAGAAACAACTCTAGATCCTTATCAGCCCAGAGATGGCACCAGAGGAATCTACATAATAAACTTGACTGATTCTTACCATTACTAGTCTCCCCGTGTAGTTGCTTTCCACACTTTGCTGCCCTTAGAAGTGCAAAGTTCTTTCCTTTGTTTTGTCACTTCTCTAAACTTTTATTTTTCTTTTGTTAAGATGCTCTATCAGCCCAAGTTCTACTCCTTTTAGTTGCTCATGCAGAATGCTCCCATGTGTAAGCAGGATGCACAGGTTAATACATTGGTGTTTGGTTGTCTCTTGTTAATCTGTTTTTGTTTTTGTCAGTCTAATTTACAGGGCCTAAGAGAGGGGTACTAGGAGGGAACAGTATTTTTTTCTCTCCTACAGCGCAAAAACGTGGACCTATTTTTACTTATGAAGATTTCTTTGCTCTTTCTTACTGGAGTAATCTAGTACATCTGTTTTACCGTTTGCATTCCTTCTTCATATTTCAAAGGGTTTTGTGCAACAGAACATACTGCAGTATCCTATGTAAGAATGTTCTCACTACTTTAGTTTTAGCAGAGAATATAATTGGGATGTTCTATTTGTCAATATTTACTTTTTAGCTCAGCAAGACCTGCAAGAATCAATCAATGAAACCTCAAATACAGAAAACCATTTTATGGTGACAAATACTCTATATTAAAGTATCTCAGTTTTCCGCAAATTGTATACAATATTCCTTGCTAAGCCCTAAGTCAAATGCCAAGATAACTTTTAATAACTCAAGAAAAAGAAAAATTAAGAAAAAAAAGCTTTTCTCTCTATAAGAACTCTAGGAAAACAGTCAGTTCTATTTATAGCTAAGTTGTGTTACATTTAAAATATTTTCAACTTCAGAACTTTGCTTATTTTACCAATAGACATGGGGCTTTAAGTTAGGTATAAAGCAAATTCAAAAATCTTTCCCAAAACAGTAGATCTCCTTGTCACAAAGTTCTGTAGTATGTGACTCTATTGGAATAATTTCAAATTCAGAATCAACAGAGTCACATCTCCTAGGGATTGTTAGAAACCTAGAAATGTGATACAGGAAAAAGAAATAGTAAGGAATGGTAAAAGCTGATGAGAAGATATTATTGAAAAAATGTGTTAAAATCATTTTTAAAAGCTGGGGAATTGTATAACCAGATCTAGTATTGAACTATTGTTAGTAGGAAGAGAAAAGAGATAACCTGGGCATGGAAATTGTGCTTTTGAGAGTGTCTTAAAACCCAAAAGGCATTAGAAAAAAAATAGCTTTTTAAAATAAAAAAGGAAACTTTACATTTGGATGAAGACTCACTTCCAGAAATATAGCCACTAAATGTCTACATTATATAAAGAAAAAAAGTCTATTTGAAACTGGCAGTGATGAGAAGAATGTATGAATGAAAAACGTAAACTGACCAAAGAATACTGGATCACAAATTGTAAAGTAATTGAAAGTGTACTATATTTATATTTATTGATTTTATTGGTAGGAGAGAGAGAGAGTGTGTGTGTGTGTGTGCGTGTGTGAGTGGGGGGTGGGGTGGGGAGTGGGTTTCAGTAAGTTCATGTGAAATCAGTTTCCCAAACAGCATTTCCTAAAAGATCTTAAACTATTCAGAATAATTTATTTCTACTCTATGGTGTATCATTTACCTCAACGCCTGAGGGTTTTAGGTAAATAAACCCATTACTTAACACATATTTTGCATCATATTTTCCAGTTTTCATTATGAAATAGTCAATACATTTCATTAGAAAAAATAATCTGGCCCCAAGATTTTAAATTCATACAAGAGTTTCAACGTTCCCGCCAATGTATATCTTAGTTTCCCTAATATGGTACATTTAATACTCCCATCTTAATCCTGCCTAGAAGTCAACATTCAGTCTCCCTGATTTTTGCACAAATATTTCAACTATATTCATATTTAAATGCATCTCACAGCTAATTTCTTTGCTTAGAAGTTCTATTCGGCTGTGTAGGACTTGAATGTCTAAACAGCCTCACTTTACACCATTGCTTTTCAGTGATTTCCTTCCAGGATGCTAGTATTCGATTTGGAATTCAAACAGTTTTATGTTTGAGAAAAGAAAAAGAGAGATGCAAATACCTTATAAAGTAGAGGCACTTTTTTCCTAATACAAACATCAACTCTATTCGGAGGATAAAAGTTTAATAATTAATCTATTCTTGAACATAATTGAATAATTATCCAGAGCCTACTATGGACAAGGCTAGTGCGCTGGTGATTATGGTGTAGGAGTGGAGGAGGACATATAAAAATGAGTAAGCTTCTTGATATCTAAGAAAATTAAGCTATTAATGAAGACGAGCTATACATAAATAATTTACAGTGCAAGGAAATAAATAATACATGCCATGGGAATGGAAATGAGTGTTTTGCATTCAGAGAAGACAGAACACACTCAACTGTGATGATTGGAGGAGATTTCAGTCAGTAAGTGACATATTAGACACAAAAGATGAATAAGATTTACACAGCAGGCACAGCAGTCCATGAGAACAACACAAACAGCAGTTCAGACTTGGAAAGGCCTGTGCTGGATTCAGGAAATGATGCTTACCATGAGGAGAGCAGAGGTTCCCTGCAGTAGGGCAATAAATCATCTCATGAAGGGCCTCAAAGGACCCAGGAGTTAGTCCTTGGTGAAGATGGACTATTCACAGTGATTTGAGCAGTGAAATCACATTGCAAAATGGTGTTCTTGGAAGGAAAAGACACTACTATGTGATTATACGGAGAAGATTAGTGGCAGTGCCTTGTTAGAGGGAAATCCTGTGAAGGATATGAAAAGATATTGTGAAAAACAATCAGCCAAGTGGTTGCCACAGAGGAGAGGAAACATGAAATGCCTGCTCTGAGAGGGGGGTGCAGCATTAAAAACAGAGCATGAGGCTGAGGGAGGAGGGGCTTTGTCAGGGAATAGGCAGTCTAACGACAAGCAGAGACTGAACTGTGCATGTGCAGACATCCAATGGGCCGGGAATTAATGAACATTAGAGGACAGGAATGCCCTGGGGCATTAAGATTTATGTCTTTGTGTAAGCAGTAAACTTTGTCGGTAAATATTCACTGATGTGAAGCATTCCTGAGGATTGAAAGAGCAGGCCACAGGAAATATAACAAATACAAGGACAGGAGACATCCAAAGGCAAGAGCCCCAGCAATGGTCTGGCTGGTTTTGTGCATGAAAGAAAACAAGACAAAGGAATGGAATGTGTAAAAAAAAATCTTTGTTTTGAAAGTCACAACAATTATTTTATTTTGAGACAGAGTCTCGCTGTGTTGCCCAGGCTGGAGTGCAGTGGCTCTATCTCCGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCGTTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTGTTTTTTGTGTGTTTTTTTTTTTAGTAGAGAAAGAGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCCGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGGACCTGGCCAAAATTCACAGTAATTTTCATCTACTCGATTTGCACCTAGTTGGGATCCTACAAATGTTTGGTTAATATTGTTCAAAATGTGATGTTATATCACAATAAGAAGCTGTGAATTTAGAGAAAAAGCTGAATATGGTAAGGTGAAATACTCAAGGAGTCAGGTAATTCGAGGTAAAAGGAAGTCATGTGAAGAAGTGAAGGAAGCAGGTCAAAAGAGAAAACGTCAGAATTAATGTGAGACCAATGAAACTCAGAAGTTCACAAAATCTAAAGTGCAGGGTAAGGAGGAGAGAGTCAAAGATGAGGAGAACAGGTATGCACTAAAGAGCGGAGCAAGCCAGCAAGAGGTACCTGGAATGAAGTAGTAGCTTAATGCCTAAGAAGTGTCTAGCTGACATGAATTTAGGCGTGTGTAAACTACTAAAATGTCCCTGTAGAGTTTAATTTATTTGCTTATGTTTTATTCTATTACTGTTGTTTTGTAGCAGTAGGTGAAAGTTCTTACAGAATTTATATATGTCATTGACTCACAACTTTGATTACTCATTTGAATGACCTCAAGAGCTTTACTCATTACTGAGGTCTAGGCTCTTCCCACAAGACTCTGCTTTTATTCTCCTGGGTGCTGTTTGCACATATGGAGTTTGGAAGCTCCCAGGTGATTTTACTAGCCAACACTGAGAAAGCAGACCAAAATGGAGCTGCCCACAGGGGACAGAGTAGAACCTGTTGACCACAGCTCACACTCTGACTCATTCAATCCAGTTTGTGAAGCAAAATCCTAGGAGAGTCCTTGTAAAAATACAAAATCCTCAGTCCTATCTGAAATCCATTAAATATGAATCTAAGTGTTGAATGCGGGACTGAACATAAGTGATTCTGACGCACACCTGTTTAAAATGTACTGTCATGGCTCTCCCTGACCCATACTTTATAAACCACTGCTACAAGTAAAGATTTTGACTTCTGCTGAGTTCATAAGCTTCCTGTGATCTGATTAGGTCATTTGTGATTCAGGATTATTAGTTTCCATTCTTATGTTGAATAACAATTACTCTAATTTCCATTAATTGTCAGCTATGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16375:HG3_PB_pbsv_2154:HG4_PB_pbsv_2194:HG3_PB_assemblyticsfalcon_13947:HG2_Ill_breakscan11_3201:HG4_PB_SVrefine2Falcon1Dovetail_1302:HG2_PB_SVrefine2Falcon2Bionano_850:HG2_PB_SVrefine2PBcRplusDovetail_5812:HG4_PB_SVrefine2PBcRDovetail_1159:HG4_Ill_SVrefine2DISCOVARDovetail_1585:HG2_PB_SVrefine2PB10Xhap12_1675:HG2_Ill_SVrefine2DISCOVARplusDovetail_6805:HG2_10X_SVrefine210Xhap12_1647:HG2_PB_SVrefine2Falcon1plusDovetail_6293:HG3_PB_SVrefine2Falcon1Dovetail_1348:HG3_Ill_SVrefine2DISCOVARDovetail_1510:HG3_PB_SVrefine2PBcRDovetail_1116;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1647:HG2_Ill_SVrefine2DISCOVARplusDovetail_6805:HG2_PB_SVrefine2PB10Xhap12_1675:HG4_Ill_SVrefine2DISCOVARDovetail_1585:HG4_PB_SVrefine2PBcRDovetail_1159;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0370548;ClusterMaxSizeDiff=0.0364159;ClusterMaxEditDist=0.155584;PBcalls=12;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=6160;DistBack=38644;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=2:116695721-116695726;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2878.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:57:0|1:42:2:0:15:1|0:0:21:24:0:0/1:18:14:0/1:201:236:.:6114:.
chr2	116973236	HG3_Ill_GATKHCSBGrefine_1417	T	TAGTTCTTTGTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGTGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6295:HG2_PB_HySA_4097:HG2_PB_HySA_4096:HG3_PB_pbsv_2156:HG3_PB_assemblyticsfalcon_13949:HG2_PB_HySA_4094:HG2_PB_pbsv_2171:HG3_Ill_MetaSV_2729:HG3_Ill_GATKHCSBGrefine_1417:HG2_Ill_MetaSV_2590:HG2_Ill_GATKHCSBGrefine_1417:HG3_PB_HySA_3334:HG2_Ill_breakscan11_3202;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1417:HG2_Ill_MetaSV_2590:HG3_Ill_GATKHCSBGrefine_1417:HG3_Ill_MetaSV_2729;NumExactMatchSVs=4;ClusterMaxShiftDist=0.167488;ClusterMaxSizeDiff=0.167488;ClusterMaxEditDist=0.220033;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=-16;DistForward=10;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=2:116973202-116973252;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2879.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:44:0|1:27:3:2:34:0|1:16:0:0:6:0/1:37:11:0/1:5:33:.:.:.
chr2	117587549	HG3_Ill_SVrefine2DISCOVARDovetail_1517	T	TTATATATTATATATTATATATATATTATATATAATATATTATATATTATATATAATATATATATAATATATAATATATAATATATTATATATAATA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16378:HG2_PB_SVrefine2Falcon1plusDovetail_6299:HG2_PB_assemblyticsfalcon_13900:HG2_PB_assemblyticsPBcR_13487:HG4_Ill_scalpel_1971:HG4_Ill_GATKHC_3520:HG4_Ill_GATKHCSBGrefine_1486:HG3_Ill_scalpel_2164:HG3_Ill_manta_459:HG3_Ill_SVrefine2DISCOVARDovetail_1517:HG3_Ill_GATKHC_3613:HG3_Ill_GATKHCSBGrefine_1422:HG2_PB_SVrefine2PBcRplusDovetail_5816:HG2_PB_SVrefine2PB10Xhap12_1679:HG2_PB_SVrefine2Falcon2Bionano_852:HG2_Ill_scalpel_2034:HG2_Ill_manta_588:HG2_Ill_GATKHC_3498:HG2_Ill_GATKHCSBGrefine_1422;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1422:HG2_Ill_GATKHC_3498:HG2_Ill_manta_588:HG2_Ill_scalpel_2034:HG2_PB_SVrefine2Falcon2Bionano_852:HG2_PB_SVrefine2PB10Xhap12_1679:HG2_PB_SVrefine2PBcRplusDovetail_5816:HG3_Ill_GATKHCSBGrefine_1422:HG3_Ill_GATKHC_3613:HG3_Ill_SVrefine2DISCOVARDovetail_1517:HG3_Ill_manta_459:HG3_Ill_scalpel_2164:HG4_Ill_GATKHCSBGrefine_1486:HG4_Ill_GATKHC_3520:HG4_Ill_scalpel_1971;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0207254;ClusterMaxSizeDiff=0.0207254;ClusterMaxEditDist=0.14433;PBcalls=7;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=96;DistBack=-1;DistForward=20;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=14;REFWIDENED=2:117587548-117587564;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2880.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:63:1/1:4:19:1:24:./.:0:1:0:0:1/1:2:23:./.:.:.:.:.:.
chr2	118325222	HG3_PB_SVrefine2Falcon1Dovetail_1359	A	AAGAATGGCAATCATTAAAATGTCAGGGAACAACAGCTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAAGTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATGCAAACTTATGTTTATTGAGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGAATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTATGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCACAAGGACAAAAAACCAAACACCGCATGTTCTCACTCACATGTGGGAATTGAACAATGAGAACACTTGGACACAGGAGGGGGAACATCACACACCAGGGCCTATTGTGGGGTGGGAGCAGTGGGGAGGGATAGCATTAGGAGATATACCTAATATAAATGATGAGCTAATGGGTGCAGCACACCAACATGGCATATGTATACGTATGTAACAAACCTGCACATTGTGCACATGTACCATAGAACTTAAAGTATAATAAAAATATATATATTAAAAAGAAGACATTTATGCAGCCAACAAACATATGAAAAAAAGCTCATCATCAAGGGTCATTAGAGAAATGAAAATCAAAACCACAATGAGATACTGTCTCATGCCAGTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1662:HG2_PB_PB10Xdip_16384:HG4_PB_pbsv_2212:HG4_PB_SVrefine2Falcon1Dovetail_1312:HG4_PB_SVrefine2PBcRDovetail_1169:HG3_PB_SVrefine2Falcon1Dovetail_1359:HG2_PB_SVrefine2Falcon2Bionano_857:HG2_PB_SVrefine2Falcon1plusDovetail_6303:HG2_PB_SVrefine2PB10Xhap12_1684;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_857:HG3_PB_SVrefine2Falcon1Dovetail_1359:HG4_PB_SVrefine2PBcRDovetail_1169;NumExactMatchSVs=3;ClusterMaxShiftDist=0.03663;ClusterMaxSizeDiff=0.03663;ClusterMaxEditDist=0.160976;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=806;DistBack=3052;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1492;REFWIDENED=2:118325223-118326714;PctSeqSimilarity=0.9823;PctSizeSimilarity=1;PctRecOverlap=0.5291;SizeDiff=0;StartDistance=-380;EndDistance=-380;GTMatch=0;TruScore=83;MatchId=2882.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:43:0|1:36:4:1:23:./.:0:5:1:2:./.:1:7:0/1:11:14:.:.:.
chr2	118629373	HG2_Ill_GATKHCSBGrefine_1437	C	CATGATTTATAATCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCGGAGGAATCGCCACACTGACTTCCACA	20	PASS	ClusterIDs=HG2_PB_HySA_4130:HG2_PB_pbsv_2190:HG4_Ill_GATKHC_3540:HG4_Ill_GATKHCSBGrefine_1500:HG2_Ill_GATKHC_3509:HG2_Ill_GATKHCSBGrefine_1437;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1437:HG2_Ill_GATKHC_3509:HG4_Ill_GATKHCSBGrefine_1500:HG4_Ill_GATKHC_3540;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0576923;ClusterMaxSizeDiff=0.0192308;ClusterMaxEditDist=0.144231;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=102;DistBack=17734;DistForward=106;DistMin=106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=105;REFWIDENED=2:118629374-118629478;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2884.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:19:0|1:22:2:0:17:./.:3:27:13:0:0/1:17:13:./.:.:.:.:.:.
chr2	118799997	HG3_Ill_GATKHC_3627	A	AATTGCGAATTGTGCACCTATAAACATGTGTGTGCAAGTATCTTTTTTGTATAATGACTTCTTTTCCTCTGGGTAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1665:HG2_PB_PB10Xdip_16389:HG3_PB_HySA_3360:HG3_PB_pbsv_2177:HG2_PB_HySA_4133:HG2_PB_SVrefine2PBcRplusDovetail_5826:HG2_PB_SVrefine2PB10Xhap12_1687:HG3_PB_SVrefine2PBcRDovetail_1130:HG3_Ill_svaba_2745:HG3_Ill_scalpel_2172:HG3_Ill_SVrefine2DISCOVARDovetail_1529:HG3_Ill_Krunchall_2946:HG3_Ill_GATKHC_3627:HG3_Ill_GATKHCSBGrefine_1438:HG3_Ill_250bpfermikitraw_2883:HG3_Ill_150bpfermikitraw_2783:HG2_PB_SVrefine2Falcon2Bionano_862:HG2_Ill_svaba_2651:HG2_Ill_SVrefine2DISCOVARplusDovetail_6819:HG2_Ill_Krunchall_2926:HG2_Ill_GATKHC_3514:HG2_Ill_GATKHCSBGrefine_1439:HG2_Ill_250bpfermikitraw_2895;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1665:HG3_PB_SVrefine2PBcRDovetail_1130:HG3_Ill_svaba_2745:HG3_Ill_scalpel_2172:HG3_Ill_SVrefine2DISCOVARDovetail_1529:HG3_Ill_Krunchall_2946:HG3_Ill_GATKHC_3627:HG3_Ill_GATKHCSBGrefine_1438:HG3_Ill_250bpfermikitraw_2883:HG3_Ill_150bpfermikitraw_2783:HG2_PB_SVrefine2Falcon2Bionano_862:HG2_Ill_svaba_2651:HG2_Ill_SVrefine2DISCOVARplusDovetail_6819:HG2_Ill_Krunchall_2926:HG2_Ill_GATKHC_3514:HG2_Ill_GATKHCSBGrefine_1439:HG2_Ill_250bpfermikitraw_2895;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.183007;PBcalls=8;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=75;DistBack=-75;DistForward=60;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=77;REFWIDENED=2:118799998-118800074;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2885.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:40:./.:8:9:6:29:0|1:12:0:1:25:0/1:17:18:./.:.:.:.:.:.
chr2	118893989	HG3_PB_SVrefine2Falcon1Dovetail_1365	C	CTACTATTTCTTGTTCTGTTGCTTTCAACTGCATCTCTTGACCCCCCGTTTTGCAAAATGAAGGTATTTCCTTCCCAACCTGTTTTTCTTCCCTTTTCATCTCCCTGTTTCTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1315:HG2_PB_pbsv_2195:HG2_PB_SVrefine2Falcon2Bionano_864:HG4_PB_pbsv_2219:HG3_PB_HySA_3366:HG3_PB_pbsv_2179:HG4_PB_SVrefine2PBcRDovetail_1171:HG4_Ill_SVrefine2DISCOVARDovetail_1602:HG4_Ill_GATKHCSBGrefine_1501:HG3_PB_SVrefine2PBcRDovetail_1132:HG3_PB_SVrefine2Falcon1Dovetail_1365:HG3_Ill_SVrefine2DISCOVARDovetail_1530:HG3_Ill_GATKHCSBGrefine_1439:HG2_PB_SVrefine2PBcRplusDovetail_5827:HG2_PB_SVrefine2PB10Xhap12_1689:HG2_PB_SVrefine2Falcon1plusDovetail_6307:HG2_Ill_SVrefine2DISCOVARplusDovetail_6820:HG2_Ill_GATKHCSBGrefine_1441:HG2_PB_PB10Xdip_16391:HG4_PB_HySA_3311:HG2_PB_HySA_4136;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1441:HG2_Ill_SVrefine2DISCOVARplusDovetail_6820:HG2_PB_SVrefine2Falcon1plusDovetail_6307:HG2_PB_SVrefine2PB10Xhap12_1689:HG2_PB_SVrefine2PBcRplusDovetail_5827:HG3_Ill_GATKHCSBGrefine_1439:HG3_Ill_SVrefine2DISCOVARDovetail_1530:HG3_PB_SVrefine2Falcon1Dovetail_1365:HG3_PB_SVrefine2PBcRDovetail_1132:HG4_Ill_GATKHCSBGrefine_1501:HG4_Ill_SVrefine2DISCOVARDovetail_1602:HG4_PB_SVrefine2PBcRDovetail_1171;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0789474;ClusterMaxSizeDiff=0.0695652;ClusterMaxEditDist=0.245763;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=112;DistBack=41969;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=2:118893990-118894102;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2887.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:32:1/1:0:14:0:12:./.:1:22:1:14:1/1:1:37:./.:.:.:.:.:.
chr2	119540391	HG3_PB_SVrefine2Falcon1Dovetail_1368	T	TAAATAAATAAAAATAATCGCCGGGCGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAAATACAAAAAAATTAGCCGGGCGTCGTGGCGGGCGCCTGTAGTCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6310:HG3_PB_pbsv_2183:HG2_PB_pbsv_2198:HG4_PB_pbsv_2222:HG2_PB_HySA_4144:HG3_PB_HySA_3371:HG4_PB_HySA_3318:HG3_PB_assemblyticsfalcon_13982:HG4_PB_SVrefine2Falcon1Dovetail_1318:HG3_PB_SVrefine2Falcon1Dovetail_1368:HG4_PB_SVrefine2PBcRDovetail_1174;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1368;NumExactMatchSVs=1;ClusterMaxShiftDist=0.136223;ClusterMaxSizeDiff=0.136223;ClusterMaxEditDist=0.232198;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=326;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=2:119540392-119540409;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.9969;PctRecOverlap=0.9755;SizeDiff=-1;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=98;MatchId=2888.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:48:0|1:35:0:0:35:./.:35:0:0:5:0/1:28:10:0/1:6:21:.:.:.
chr2	119670371	HG3_Ill_150bpfermikitraw_2789	C	CCTTTCTTTCTTCCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1670:HG2_PB_HySA_4148:HG2_PB_pbsv_2199:HG2_PB_PB10Xdip_16396:HG3_PB_HySA_3374:HG3_Ill_Spiral_2315:HG3_Ill_GATKHC_3634:HG3_Ill_GATKHCSBGrefine_1441:HG3_Ill_FB_1933:HG3_Ill_Krunchall_2954:HG3_Ill_250bpfermikitraw_2889:HG3_Ill_150bpfermikitraw_2789:HG2_Ill_Krunchall_2933:HG2_Ill_GATKHC_3521:HG2_Ill_GATKHCSBGrefine_1444:HG2_Ill_FB_1939:HG2_Ill_250bpfermikitraw_2904:HG2_Ill_150bpfermikitraw_2673:HG4_CG_vcfBeta_1414:HG3_CG_vcfBeta_1231:HG2_PB_SVrefine2PBcRplusDovetail_5830:HG3_PB_pbsv_2184:HG2_PB_SVrefine2Falcon1plusDovetail_6311:HG2_PB_SVrefine2Falcon2Bionano_867:HG3_Ill_SVrefine2DISCOVARDovetail_1533:HG2_PB_SVrefine2PB10Xhap12_1693:HG2_Ill_SVrefine2DISCOVARplusDovetail_6826;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2673:HG2_Ill_250bpfermikitraw_2904:HG2_Ill_FB_1939:HG2_Ill_GATKHCSBGrefine_1444:HG2_Ill_GATKHC_3521:HG2_Ill_Krunchall_2933:HG3_Ill_150bpfermikitraw_2789:HG3_Ill_250bpfermikitraw_2889:HG3_Ill_Krunchall_2954;NumExactMatchSVs=9;ClusterMaxShiftDist=0.285714;ClusterMaxSizeDiff=0.285714;ClusterMaxEditDist=0.285714;PBcalls=9;Illcalls=15;TenXcalls=1;CGcalls=2;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=1;NumTechs=4;NumTechsExact=1;SVLEN=52;DistBack=-52;DistForward=-1;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=79;REFWIDENED=2:119670345-119670423;PctSeqSimilarity=0.9636;PctSizeSimilarity=0.9286;PctRecOverlap=0.9298;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=2889.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:./.:0:1:1:5:./.:1:7:0:3:1/1:1:45:./.:.:.:.:.:.
chr2	120029019	HG3_Ill_Spiral_2318	A	ATATGTATACATACATATATATGTATACATACATATATATGTATGTATGTATACATACATATATATGTATGTATGTATACATACATATGTATGTATG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1371:HG3_PB_pbsv_2187:HG3_PB_SVrefine2PBcRDovetail_1136:HG3_Ill_manta_461:HG3_Ill_Spiral_2318:HG3_Ill_SVrefine2DISCOVARDovetail_1535:HG3_Ill_Krunchall_2958:HG3_Ill_GATKHC_3639:HG3_Ill_GATKHCSBGrefine_1442:HG3_Ill_250bpfermikitraw_2895:HG3_Ill_150bpfermikitraw_2794:HG2_PB_SVrefine2Falcon2Bionano_871:HG2_Ill_manta_595:HG2_Ill_SVrefine2DISCOVARplusDovetail_6829:HG2_10X_SVrefine210Xhap12_1673:HG2_PB_pbsv_2203;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1673:HG2_Ill_SVrefine2DISCOVARplusDovetail_6829:HG2_Ill_manta_595:HG2_PB_SVrefine2Falcon2Bionano_871:HG3_Ill_150bpfermikitraw_2794:HG3_Ill_250bpfermikitraw_2895:HG3_Ill_GATKHCSBGrefine_1442:HG3_Ill_GATKHC_3639:HG3_Ill_Krunchall_2958:HG3_Ill_SVrefine2DISCOVARDovetail_1535:HG3_Ill_Spiral_2318:HG3_Ill_manta_461:HG3_PB_SVrefine2PBcRDovetail_1136;NumExactMatchSVs=13;ClusterMaxShiftDist=0.102041;ClusterMaxSizeDiff=0.102041;ClusterMaxEditDist=0.221106;PBcalls=5;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=96;DistBack=-61;DistForward=-1;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=88;REFWIDENED=2:120028993-120029080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2890.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:22:./.:5:9:21:11:./.:2:23:7:7:0/1:14:49:./.:.:.:.:.:.
chr2	120282782	HG2_10X_SVrefine210Xhap12_1676	T	TGGGCTCAAGAGATCCTCTCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGGGCCCAGCACTAGATGGGTCTTGCAAACTCAATTTTCCTTAGTCTGCACTGGTGCCCACTCCCTTCCTTCTTCTCTCTCCTCCTTTCTTGATCTTTCTCCCAGGCACTTTAAGTACATCAGCTCATTTAATTCTCCCTCACACCCCTAGGTGATACGATGTCCATTTGACAGAGGAGGGCATTGGAGGTGGAGGAGGATTCATTACATGTCTGGGTACTGCAACTCAGAGGCTCAGACAGGAAAGCCTGAATCTACCCTTACATGGCTGACCCGACTCTCTGTAACTGGCCCTTACGCA	20	PASS	ClusterIDs=HG2_PB_HySA_4161:HG2_PB_pbsv_2205:HG4_PB_pbsv_2227:HG2_PB_SVrefine2PB10Xhap12_1697:HG2_PB_PB10Xdip_16398:HG4_PB_HySA_3333:HG2_PB_SVrefine2PBcRplusDovetail_5834:HG2_10X_SVrefine210Xhap12_1676:HG2_PB_SVrefine2Falcon1plusDovetail_6315;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1676;NumExactMatchSVs=1;ClusterMaxShiftDist=0.172166;ClusterMaxSizeDiff=0.169297;ClusterMaxEditDist=0.20373;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=362;DistBack=16862;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=363;REFWIDENED=2:120282783-120283145;PctSeqSimilarity=0.9986;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2891.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:66:0|1:33:0:0:35:./.:2:2:0:29:1/1:1:9:0/1:2:11:.:.:.
chr2	120418495	HG3_Ill_Spiral_2320	A	ATTCCCAATCCATCTCCATTCCGCCATCTTGCTGCCCCATGGGTACCCACCCTTCCCACTGTGGGCAACCATCTCTTTAGTTTCTGGTTTATCCTTCTTGTGGGTAATTTTTAAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16399:HG2_PB_assemblyticsPBcR_13529:HG2_PB_SVrefine2PBcRplusDovetail_5836:HG4_PB_SVrefine2Falcon1Dovetail_1323:HG3_PB_SVrefine2PBcRDovetail_1138:HG3_Ill_SVrefine2DISCOVARDovetail_1538:HG2_Ill_SVrefine2DISCOVARplusDovetail_6832:HG3_Ill_manta_462:HG3_Ill_Spiral_2320:HG3_Ill_250bpfermikitraw_2897:HG2_PB_SVrefine2Falcon2Bionano_874:HG2_Ill_manta_596:HG2_PB_HySA_4162:HG2_PB_SVrefine2PB10Xhap12_1699:HG2_PB_pbsv_2207:HG3_PB_pbsv_2189;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_manta_596:HG2_PB_SVrefine2Falcon2Bionano_874:HG3_Ill_250bpfermikitraw_2897:HG3_Ill_Spiral_2320:HG3_Ill_manta_462;NumExactMatchSVs=5;ClusterMaxShiftDist=0.117117;ClusterMaxSizeDiff=0.117117;ClusterMaxEditDist=0.18018;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=114;DistBack=-1;DistForward=17641;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:120418496-120418495;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2892.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:57:./.:14:30:6:10:1|0:1:21:19:0:0/1:22:8:./.:.:.:.:.:.
chr2	120451454	HG2_Ill_SVrefine2DISCOVARplusDovetail_6833	A	ACACAAACATACCACATACACCACACATCACATACACATCACACATGCCACACACATCACACAAGCCACACACACACACGACACACAAACACATACCACATACACATTACACATACCACACACATCACACATACCGTACACAAACACACCACACAACATACCACACACACAGCACACAAACACATACTGCATACACATACCACATAACCACATATGCACAACATATATCACATACACATCACACATACCACACACATCACACATACCATACACACAACACAAACATACCACACACATGCAACATGGCATACACACATAAAACACAAACACCACACATGCAACATACTGTACACACAACACAAACACCACAGAAACACAACATACCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6316:HG3_PB_pbsv_2190:HG2_PB_pbsv_2208:HG2_PB_PB10Xdip_16400:HG2_Ill_breakscan11_3206:HG4_Ill_manta_517:HG4_Ill_MetaSV_2690:HG4_Ill_GATKHCSBGrefine_1507:HG3_Ill_GATKHCSBGrefine_1443:HG2_Ill_manta_597:HG2_Ill_MetaSV_2598:HG2_Ill_GATKHCSBGrefine_1446:HG3_Ill_MetaSV_2733:HG4_PB_pbsv_2228:HG2_PB_HySA_4163:HG4_PB_HySA_3335:HG4_PB_SVrefine2Falcon1Dovetail_1324:HG4_PB_SVrefine2PBcRDovetail_1178:HG4_Ill_SVrefine2DISCOVARDovetail_1610:HG3_PB_SVrefine2PBcRDovetail_1139:HG3_Ill_SVrefine2DISCOVARDovetail_1539:HG2_PB_SVrefine2PBcRplusDovetail_5837:HG2_PB_SVrefine2PB10Xhap12_1700:HG2_PB_SVrefine2Falcon2Bionano_875:HG2_Ill_SVrefine2DISCOVARplusDovetail_6833:HG3_PB_SVrefine2Falcon1Dovetail_1373;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6833:HG2_PB_SVrefine2Falcon2Bionano_875:HG2_PB_SVrefine2PB10Xhap12_1700:HG2_PB_SVrefine2PBcRplusDovetail_5837:HG3_Ill_SVrefine2DISCOVARDovetail_1539:HG3_PB_SVrefine2PBcRDovetail_1139:HG4_Ill_SVrefine2DISCOVARDovetail_1610:HG4_PB_SVrefine2PBcRDovetail_1178;NumExactMatchSVs=8;ClusterMaxShiftDist=0.084788;ClusterMaxSizeDiff=0.084788;ClusterMaxEditDist=0.187952;PBcalls=14;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=385;DistBack=15224;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=145;REFWIDENED=2:120451455-120451599;PctSeqSimilarity=0.9824;PctSizeSimilarity=0.9974;PctRecOverlap=0.8243;SizeDiff=-1;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=93;MatchId=2893.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:74:1/1:0:29:1:30:./.:15:262:14:246:1/1:0:11:1/1:1:72:.:.:.
chr2	122085247	HG4_Ill_GATKHCSBGrefine_1513	A	ACATACACTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGTTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1331:HG2_PB_HySA_4188:HG2_PB_assemblyticsfalcon_13964:HG2_PB_pbsv_2221:HG4_PB_assemblyticsfalcon_13776:HG3_PB_assemblyticsfalcon_14010:HG4_PB_pbsv_2239:HG2_Ill_breakscan11_3207:HG4_PB_HySA_3349:HG2_PB_SVrefine2Falcon1plusDovetail_6324:HG4_Ill_SVrefine2DISCOVARDovetail_1616:HG4_PB_SVrefine2PBcRDovetail_1183:HG4_Ill_MetaSV_2692:HG4_Ill_GATKHCSBGrefine_1513:HG2_Ill_MetaSV_2600:HG3_PB_SVrefine2Falcon1Dovetail_1382;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_2600:HG4_Ill_GATKHCSBGrefine_1513:HG4_Ill_MetaSV_2692;NumExactMatchSVs=3;ClusterMaxShiftDist=0.126348;ClusterMaxSizeDiff=0.126348;ClusterMaxEditDist=0.245199;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=311;DistBack=17582;DistForward=56347;DistMin=17582;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:122085248-122085261;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2894.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:45:23:0|1:41:0:1:19:0|1:21:0:0:5:0/1:36:12:./.:4:27:.:.:.
chr2	122902358	HG2_PB_assemblyticsPBcR_13548	T	TATAAATATAGTATATATAAATATATAGTATATATAAATATAGTATATATAAATATATAGTATATATAA	20	PASS	ClusterIDs=HG2_PB_HySA_4192:HG3_PB_HySA_3417:HG3_Ill_250bpfermikitraw_2914:HG2_PB_assemblyticsPBcR_13548:HG2_PB_assemblyticsfalcon_13967:HG2_PB_PB10Xdip_16412:HG2_PB_pbsv_2225;NumClusterSVs=7;ExactMatchIDs=HG2_PB_assemblyticsPBcR_13548:HG3_Ill_250bpfermikitraw_2914;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0882353;ClusterMaxSizeDiff=0.0437956;ClusterMaxEditDist=0.220588;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=68;DistBack=10;DistForward=129236;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=2:122902357-122902362;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2895.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:63:1/1:4:24:3:26:./.:0:8:1:5:0/1:1:7:./.:.:.:.:.:.
chr2	123983782	HG2_PB_SVrefine2PB10Xhap12_1706	C	CGGATATATATATCCGGATATATATATTTATATATGGATATATATATCCGGATATATATATTTATATATGGATATATATATCCGGATATATATATTTATATATGGATATATATATCCGGATATATATATTTATATATGGATATATATATCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6327:HG3_PB_HySA_3427:HG3_PB_pbsv_2210:HG4_PB_SVrefine2PBcRDovetail_1185:HG3_PB_SVrefine2Falcon1Dovetail_1385:HG2_Ill_SVrefine2DISCOVARplusDovetail_6841:HG3_Ill_SVrefine2DISCOVARDovetail_1550:HG3_PB_SVrefine2PBcRDovetail_1150:HG2_PB_assemblyticsPBcR_13556:HG2_PB_SVrefine2PBcRplusDovetail_5844:HG2_PB_SVrefine2PB10Xhap12_1706:HG2_PB_pbsv_2230:HG2_PB_HySA_4200:HG2_PB_PB10Xdip_16414:HG4_Ill_SVrefine2DISCOVARDovetail_1623:HG2_PB_SVrefine2Falcon2Bionano_881:HG4_PB_SVrefine2Falcon1Dovetail_1338;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1706:HG2_PB_SVrefine2PBcRplusDovetail_5844;NumExactMatchSVs=2;ClusterMaxShiftDist=0.339833;ClusterMaxSizeDiff=0.339833;ClusterMaxEditDist=0.394444;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=150;DistBack=29;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=74;REFWIDENED=2:123983721-123983794;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2898.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:57:1/1:5:25:1:21:./.:3:27:2:18:0/1:5:22:./.:.:.:.:.:.
chr2	126180292	HG2_PB_SVrefine2Falcon2Bionano_888	G	GTCTGGTGGGGATGTGGAGAGTCTTTATGTCTAGCCCAGGGATTGTAAATACACCAATCAGCACCCTGTGTTTAGCTCAAGGTTTGTGAGTGCACCAGTCCACACTCTGTATCTAGCTGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_888:HG4_PB_SVrefine2PBcRDovetail_1192:HG2_PB_PB10Xdip_16427:HG2_PB_HySA_4227:HG4_PB_pbsv_2264:HG2_PB_SVrefine2Falcon1plusDovetail_6335:HG4_PB_SVrefine2Falcon1Dovetail_1346:HG4_Ill_GATKHCSBGrefine_1527:HG4_Ill_250bpfermikitraw_2978:HG2_PB_pbsv_2245:HG2_PB_assemblyticsfalcon_14000:HG2_PB_SVrefine2Falcon1plusDovetail_6334:HG4_PB_assemblyticsfalcon_13816:HG2_PB_SVrefine2PBcRplusDovetail_5853:HG4_Ill_SVrefine2DISCOVARDovetail_1634:HG2_PB_SVrefine2PB10Xhap12_1716;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_888:HG4_Ill_SVrefine2DISCOVARDovetail_1634:HG2_PB_SVrefine2PB10Xhap12_1716;NumExactMatchSVs=3;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.0833333;ClusterMaxEditDist=0.264;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=119;DistBack=68467;DistForward=20;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=469;REFWIDENED=2:126180293-126180761;PctSeqSimilarity=0.9806;PctSizeSimilarity=1;PctRecOverlap=0.7059;SizeDiff=0;StartDistance=-35;EndDistance=-35;GTMatch=0;TruScore=89;MatchId=2900.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:51:0|1:37:3:4:46:./.:7:0:0:1:0/1:26:7:./.:.:.:.:.:.
chr2	126370716	HG2_Ill_SVrefine2DISCOVARplusDovetail_6855	G	GGAAACCTGTTTAATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGTACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16428:HG2_PB_pbsv_2246:HG4_PB_pbsv_2266:HG4_PB_assemblyticsfalcon_13817:HG4_PB_SVrefine2Falcon1Dovetail_1347:HG2_PB_assemblyticsfalcon_14001:HG4_PB_HySA_3381:HG4_PB_SVrefine2PBcRDovetail_1194:HG2_Ill_SVrefine2DISCOVARplusDovetail_6855:HG2_PB_SVrefine2Falcon1plusDovetail_6336:HG2_PB_SVrefine2Falcon2Bionano_889:HG2_PB_SVrefine2PBcRplusDovetail_5854:HG2_PB_SVrefine2PB10Xhap12_1717:HG3_PB_SVrefine2Falcon1Dovetail_1394:HG2_10X_SVrefine210Xhap12_1699:HG3_PB_pbsv_2225:HG3_PB_HySA_3444:HG2_PB_HySA_4228;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6855:HG4_PB_SVrefine2PBcRDovetail_1194;NumExactMatchSVs=2;ClusterMaxShiftDist=0.13764;ClusterMaxSizeDiff=0.13764;ClusterMaxEditDist=0.291013;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=359;DistBack=495;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=2:126370717-126370734;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9972;PctRecOverlap=0.9945;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2901.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:98:./.:0:0:0:5:./.:0:3:0:3:1/1:0:17:1/1:3:67:.:.:.
chr2	128424044	HG2_PB_SVrefine2PB10Xhap12_1726	T	TTGAATAATAATAGCTCGTGGTCCCAGTAAGGAAGTAGCAGAATGGAATATTATGAACAACTGTATGCCAATAAATGAAATAACCTACTGAAATGGAGAGATCCTAGAAGGACACTACTATGCC	20	PASS	ClusterIDs=HG2_PB_HySA_4248:HG3_PB_pbsv_2239:HG3_PB_HySA_3454:HG2_10X_SVrefine210Xhap12_1705:HG3_Ill_SVrefine2DISCOVARDovetail_1575:HG2_PB_PB10Xdip_16443:HG2_PB_SVrefine2PB10Xhap12_1726:HG2_PB_SVrefine2Falcon1plusDovetail_6342:HG2_PB_pbsv_2256;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1726;NumExactMatchSVs=1;ClusterMaxShiftDist=0.205882;ClusterMaxSizeDiff=0.205882;ClusterMaxEditDist=0.274368;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=123;DistBack=-118;DistForward=17;DistMin=-118;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=118;REFWIDENED=2:128424045-128424162;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.8978;PctRecOverlap=0.8321;SizeDiff=-14;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=89;MatchId=2902.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:26:0|1:19:4:0:20:./.:8:6:7:0:0/1:29:17:./.:.:.:.:.:.
chr2	128738971	HG2_PB_SVrefine2Falcon2Bionano_900	C	CCTGACTCAGCTCCCCCACCCCGATCCAGTCCTCCTGCACCCCGACTCAGCTCCCCCACCCCGACCCAGTCCTCCTGCACCCTCGACTCAGCTCCCTCACCCCGACCCAGTCCTCCTGCA	10	PASS	ClusterIDs=HG2_PB_pbsv_2258:HG4_PB_assemblyticsfalcon_13833:HG2_PB_PB10Xdip_16446:HG3_PB_SVrefine2Falcon1Dovetail_1406:HG4_PB_SVrefine2PBcRDovetail_1200:HG4_PB_SVrefine2Falcon1Dovetail_1356:HG3_PB_SVrefine2PBcRDovetail_1166:HG2_PB_SVrefine2PBcRplusDovetail_5862:HG2_PB_SVrefine2PB10Xhap12_1728:HG2_PB_SVrefine2Falcon2Bionano_900:HG4_PB_HySA_3401:HG4_PB_pbsv_2279:HG3_PB_pbsv_2242;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_900:HG2_PB_SVrefine2PB10Xhap12_1728:HG2_PB_SVrefine2PBcRplusDovetail_5862:HG3_PB_SVrefine2PBcRDovetail_1166:HG4_PB_SVrefine2Falcon1Dovetail_1356:HG4_PB_SVrefine2PBcRDovetail_1200;NumExactMatchSVs=6;ClusterMaxShiftDist=0.096;ClusterMaxSizeDiff=0.096;ClusterMaxEditDist=0.244275;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=119;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=603;REFWIDENED=2:128738842-128739444;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2903.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:0:10:0:22:./.:2:12:1:14:./.:0:0:./.:.:.:.:.:.
chr2	128839770	HG2_Ill_SVrefine2DISCOVARplusDovetail_6863	C	CTTTCTTTCTTTTTTTTTTTTGAGATGAAGTCTCTCTCTGTTGCCCAGGCTGGAGAGGCTGAAGTGCAGTGGCACAATCTCTGCTCACGGCAGGCTCCACCTCCTGAATTCAAGCAATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACATGCCACCACGCCTGGCTAGTTTTTTGTGTTTTTAGTAGAGACAGGGTTTCACTATGTTGGCCAAGCTGGTCTTGAACTCCTGACCTCAGGTGATCTACCTGCCTCGGCCTTCCAAAGTTCTGGGATTACAGGCATGAGCCACCATGCCTGGCTTGCTACTATAAGTCTTTTATGTACAGTTGAGATACAGGGTAGTTGTTTTATGCCCAATTTTCCATCTCCAAACCTCCCCATTACCTCCTGAAGCAATCTGGCATATAGGGTAGATCTAAATGATGGTTCAAGGTTCTGTAAAAATGTAACTGAAATCAGCCTAGGAATGAGAGGATGCCTAATTGCTGAACCCATATTGCAAGAACAGTAAAAAATTGTTATGACTTGGATGCCTTATTAAACAAAGAACCTTAGGATATAGGAGTACTTAAAATTAAGACTTGGAAACCAATCTTCCCATTCCAAATTCATAAGTTTTGAGGGGGAGGGGTGATAGTTGAGAATTGTGTGTCCAGTTACCATCTGAAAAAACATCATGTGATGCCATTACTTCCGGTGACCGATGACCTCTGAGTTTGACTGTTGTACATGTTAAAACTGCCCTTGCAAAATTATGACAGTAAGAGAAGTTTGACATAGTTGAGACCATCTTGCTTCTGACCTCCAAGTTGTCCTTGGTCATGTCCTTGGCCAAGCTAACTATAAATTTGGGAGGAATTTATAGTTTTACTTTGAAACAAGAATAAGAATTGTCCCTCCCTAAAACTAACCCCTTTCCTGTTCCAGGGCCGAAATTGCCTTTGTAAGACGAATGACAGACCACAAGATGTAGTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1357:HG4_PB_pbsv_2280:HG2_PB_PB10Xdip_16447:HG2_PB_pbsv_2259:HG4_Ill_GATKHCSBGrefine_1535:HG3_Ill_GATKHCSBGrefine_1472:HG2_Ill_MetaSV_2608:HG2_Ill_GATKHCSBGrefine_1471:HG4_Ill_MetaSV_2702:HG4_PB_HySA_3402:HG3_PB_pbsv_2243:HG2_PB_SVrefine2Falcon1plusDovetail_6345:HG4_Ill_SVrefine2DISCOVARDovetail_1644:HG2_PB_SVrefine2Falcon2Bionano_901:HG3_PB_SVrefine2PBcRDovetail_1167:HG3_Ill_SVrefine2DISCOVARDovetail_1579:HG2_PB_SVrefine2PBcRplusDovetail_5863:HG2_PB_SVrefine2PB10Xhap12_1729:HG2_Ill_SVrefine2DISCOVARplusDovetail_6863:HG2_10X_SVrefine210Xhap12_1709:HG4_PB_SVrefine2PBcRDovetail_1201:HG3_PB_SVrefine2Falcon1Dovetail_1407;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1709:HG2_Ill_SVrefine2DISCOVARplusDovetail_6863:HG2_PB_SVrefine2PB10Xhap12_1729:HG2_PB_SVrefine2PBcRplusDovetail_5863:HG3_Ill_SVrefine2DISCOVARDovetail_1579:HG3_PB_SVrefine2PBcRDovetail_1167;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0548902;ClusterMaxSizeDiff=0.0508728;ClusterMaxEditDist=0.218005;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=987;DistBack=28330;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=2:128839771-128840068;PctSeqSimilarity=0.984;PctSizeSimilarity=0.9899;PctRecOverlap=0.7903;SizeDiff=10;StartDistance=-202;EndDistance=-202;GTMatch=0;TruScore=92;MatchId=2904.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:72:1/1:5:20:0:20:./.:1:10:0:5:1/1:0:28:0/1:22:99:.:1034:.
chr2	128965936	HG2_Ill_GATKHC_3617	C	CGCCTCTGCCTGGCTGCCCACCCTCTGGGAAGTGAGGAGCGCCTCTGCCCAGCTGCCCAACTGTCTGGGAAGTGAGGAGA	20	PASS	ClusterIDs=HG4_PB_HySA_3405:HG4_PB_pbsv_2282:HG2_PB_PB10Xdip_16464:HG2_PB_pbsv_2261:HG2_PB_HySA_4256:HG3_PB_pbsv_2245:HG4_Ill_GATKHC_3647:HG3_Ill_scalpel_2231:HG3_Ill_GATKHC_3719:HG3_Ill_GATKHCSBGrefine_1474:HG2_PB_assemblyticsfalcon_14026:HG2_Ill_GATKHC_3617:HG2_Ill_250bpfermikitraw_2988;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2988:HG2_Ill_GATKHC_3617:HG2_PB_assemblyticsfalcon_14026:HG3_Ill_GATKHCSBGrefine_1474:HG3_Ill_GATKHC_3719:HG3_Ill_scalpel_2231:HG4_Ill_GATKHC_3647;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0853659;ClusterMaxSizeDiff=0.0731707;ClusterMaxEditDist=0.295858;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=79;DistBack=22888;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=285;REFWIDENED=2:128965769-128966053;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2905.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:./.:25:16:2:8:./.:1:4:0:6:./.:0:7:./.:.:.:.:.:.
chr2	129550087	HG4_PB_pbsv_2287	C	CCCTCACAAAGAACTCTCACACACAACACATCCACACACATGCAACGTGTCACACAACATCTCACACACGCACAAAGTTCTCACACATGCACACCAACCCTTTCACACATCACCAGTGTCCTACAACACCACACGATCCACCACAGTCCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1715:HG4_Ill_MetaSV_2706:HG3_PB_pbsv_2250:HG4_PB_pbsv_2287:HG2_PB_pbsv_2266:HG2_PB_SVrefine2Falcon1plusDovetail_6351;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_2287;NumExactMatchSVs=1;ClusterMaxShiftDist=0.139535;ClusterMaxSizeDiff=0.139535;ClusterMaxEditDist=0.325879;PBcalls=4;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=149;DistBack=4;DistForward=184;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:129550088-129550087;PctSeqSimilarity=0.924;PctSizeSimilarity=0.9866;PctRecOverlap=0.5369;SizeDiff=2;StartDistance=68;EndDistance=68;GTMatch=0;TruScore=81;MatchId=2906.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:34:0|1:47:3:0:25:./.:42:0:35:7:0/1:16:2:./.:.:.:.:.:.
chr2	129685172	HG2_Ill_SVrefine2DISCOVARplusDovetail_6869	A	AAATGTTTTACAAAGTATATTTCAGTGGGCTAAGGTCAACGTGTTGGCAGGGCTGCACTCCCTCTGTAATCTAGGGGAAATCAATTTCCTTGTCTTTTCAAGTTTCTCTAGCAACATGCCTGTATTCCTTGGCTCTTGACTCTCCCTTTCTTCATCTTGACTCTTTCCTTCATCTTCAAAGCCAGCAGTGTGCATGTTCAAACCTTTCAATGTTTTGGTCACATCATCTACACTACAGTCAATTCTGCCTCTGTCTTCCCTTTATAAGGACACCTGTAATTACATTTAAAGACCACCCAAGTAATTC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1362:HG2_PB_pbsv_2267:HG2_PB_assemblyticsfalcon_14033:HG4_PB_assemblyticsfalcon_13841:HG2_Ill_breakscan11_3208:HG4_Ill_MetaSV_2707:HG4_Ill_GATKHCSBGrefine_1539:HG2_PB_SVrefine2Falcon2Bionano_906:HG2_PB_SVrefine2Falcon1plusDovetail_6352:HG2_Ill_SVrefine2DISCOVARplusDovetail_6869:HG2_Ill_MetaSV_2615:HG2_Ill_GATKHCSBGrefine_1477;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1477:HG2_Ill_MetaSV_2615:HG2_Ill_SVrefine2DISCOVARplusDovetail_6869:HG2_PB_SVrefine2Falcon1plusDovetail_6352:HG2_PB_SVrefine2Falcon2Bionano_906:HG4_Ill_GATKHCSBGrefine_1539:HG4_Ill_MetaSV_2707;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0517799;ClusterMaxSizeDiff=0.0517799;ClusterMaxEditDist=0.119741;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=306;DistBack=0;DistForward=2;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=2:129685173-129685177;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2907.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:72:./.:15:8:7:12:0|1:26:1:0:53:0/1:24:27:0/1:8:28:.:.:.
chr2	129697650	HG3_Ill_250bpfermikitraw_2967	G	GCACCCTCTACCCCCACATAAATCTATAAAACACGCACCCTCTATCCCCACATAAATCTATACAACACT	20	PASS	ClusterIDs=HG3_PB_pbsv_2252:HG4_Ill_Krunchall_3156:HG2_PB_HySA_4266:HG2_PB_pbsv_2268:HG2_PB_PB10Xdip_16469:HG4_PB_pbsv_2289:HG4_PB_assemblyticsfalcon_13842:HG4_Ill_150bpfermikitraw_2891:HG3_Ill_scalpel_2234:HG3_Ill_Krunchall_3026:HG3_Ill_GATKHC_3729:HG3_Ill_GATKHCSBGrefine_1482:HG3_Ill_250bpfermikitraw_2967:HG3_Ill_150bpfermikitraw_2854:HG2_Ill_150bpfermikitraw_2763:HG2_Ill_Krunchall_3023:HG4_Ill_GATKHC_3659:HG4_Ill_GATKHCSBGrefine_1540:HG4_Ill_250bpfermikitraw_3009:HG2_Ill_GATKHC_3626:HG2_Ill_GATKHCSBGrefine_1478:HG2_Ill_250bpfermikitraw_2994:HG2_PB_assemblyticsfalcon_14034:HG2_PB_assemblyticsPBcR_13613:HG4_PB_HySA_3416:HG3_PB_HySA_3465:HG2_PB_HySA_4265;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2763:HG3_Ill_150bpfermikitraw_2854:HG3_Ill_250bpfermikitraw_2967:HG3_Ill_GATKHCSBGrefine_1482:HG3_Ill_GATKHC_3729:HG3_Ill_Krunchall_3026:HG3_Ill_scalpel_2234:HG4_Ill_150bpfermikitraw_2891:HG4_PB_assemblyticsfalcon_13842;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0724638;ClusterMaxSizeDiff=0.0719424;ClusterMaxEditDist=0.34965;PBcalls=11;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=68;DistBack=12465;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=10;REFWIDENED=2:129697649-129697661;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2908.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:42:1/1:2:19:2:20:./.:7:48:13:32:0/1:2:16:./.:.:.:.:.:.
chr2	129929433	HG2_PB_SVrefine2PBcRplusDovetail_5871	C	GATAAGAGGGCTGTCTGGGTCCCTTTCGCAAGAGCACTAATCCCATCCATGCAGGCTCCATTCTATGAACTAATCACCTCTCAGAGGCCCCACCTCCTAATACCATCAAATTGAGAGTTAGATTTTCAACATGTGAGTTTTGGAAGAACATAAACATTTAGTCCATTGCACAAGTCAAGCCAGCTTTCTTTGGAAAGAAAGACCTTTATCCAAAGATAGCTTTCAAGTTTTTGAGGAAAGTGTGCTTTCTGGAGGCAGGGTTATTCAGTCTTTGCTATTCCTGTTCAAACGCTTTCCCCCATGTGACTCCCTACACACCCCATTTACAGAAAAGTCCCTTTACAGCTCAAAGTCTTAGGAAGCTCAGGCCCATCCTGGGCCAGCTGCTCAGGAAAGGTAGTGGTGGTGTGGGAGCAATGCATACACCAGGGGGCTGCTGCAGATACATGGTGGAAACAGCTGGCTGGGGCGGGGTCCTGGTGACAACAGAGTGGAGTGGAAGAGGCTGAAGTGATGGCAGGGGAGGTTTCCCTTCCTACACCTTTGGTATAGTACAGGCCTTGCCCCATAGTAGATATTCAATTAGTAGGTAAATAAACATAGATCATAAATGAGTCAATGAATAAATATATCTTTATTTTTCTATTTCTCACTTCTTGCCTTCTCTAAACACATTTCATTTTCTCTTTTCCCTGTTTTCAAAGTGGAAAGCTTGGAGTTGTGGGTCTGAGTTTCACGATCCCTCTTGGAGCATCTTCAAGATGCATGCCCTGTAAATTGATCGCTTTGAAACCTGATCCAGCAGAGCTCAATTTTTGAAACTGTATTTGAGAGCCCCATGATATATGATTCTCTGGGAAAAAAAAAAACTCTCAACTTGAAACACATACACTGAGATTTTTTTTCCTCCTATCTTTTTACGTCATTGGAAAGTTAACAACCCACTTGTTAACTTCACCTTACCAAACAGCAGCTTGAGTGTTGATATGCATTTCAGTAGAGACACAGAAGAGCGAAGAGCTGTGAGGACATCCTACCCCAAATGCAAGGCCTGTGAACTTCCTGTGACTGCCCACTGCTTCTTCACTTCTGAGGCACCACCCCATTGATATTTCAGTGGGATATGGTAACCAGGGTTAAAAATCCTTCTCTCAGACTTTTGTTTCCTGTCAACATGGAGTAACTGAAATCAGGTTTGTCTTCCTTCTTGTTTATATACTCCTTTTAGTTGTTATTTTTAGAAACAAGAAAAACAGGGAAGATATGTAGAACGCTTACTCTCAAGACAATGAACAACAAGGCAATGAAAGACAGCAATTCCTGACTGATGGGAAGAAAACCCCTTTCCCCACCATGATTTCGACGTAGGCAGAGTAAACCACCTGGAATTTCACCCCCATTTGGCAGGACCCTGTTAGTGTCCTCCCACCCTCATCAGCTCTCAGGCAGGCCAGTCTTGCTTAAACAGAAGATTTAAATAAAATACAGAATTCATATGATAATATCCCAAAATATACAGAATGTAATTGAAATCACTAATCACCCCAAGAAACAGGAAAATCTCAACTTCAGTGAGAAAAGACAATTAACAGAGGCAAACACCAAGATGACACAGATGTTGGAATTGTCTGGCAAAGATTTTAAAGCAGCCATCATAAAAATGTTTCACTAAGCAGTTATGAAGATGCTTGAAATAGAGTCCTAGAAAATGAATAGAAGATATAAAGAAGGACAAAATGGAAATTTTCTAACTTAAAAATACAATAGTCATAATAAAAAACTCACTGGGTGGGTTCAACAACAGAATAAAAATGACACAGAAAGAATCAGTACGTTTGAAGATAGAAAAATAAAAATTACAATCTAAAAAAAAGGAGAGGAAATAGACTAAAAAAAAAGCCTCAGAGACATGTAGGATTCTAATTTTAAAAATCTAATATTTGTGTCATCACTGTTAGAAAAGAGGAGGAAAAAGAGCACAAGGTTAAGAACATATGGCTAGAAATTTTTCAAATTTGGCCAAAAAATTAATATACATGTTCAAAAAGATGAGTACAACCCAAACAGGATAAACCCAAGGAAATCCATGCCGAGAAACATCTAATGAAGCTCTGGAAACTAAGCACACACACACACGCACGTGCGTGTGCACACACACACACATTATTTAACTAGCAAGAGAAAAAAAAGAATGTCATTTGATTTCTCATTGGAAATCATGGAGACTAGAAGGAAGTAATACAAGTTTTCTCAAATGCTGAAAGAAAAAACTGTTAGCTAAAAATTCTTTTGAGTTCCTGAAATTTCCTTCAAGAATAAAAGGAAAATCAAGAAATTTATAAACAGAAAAAATCAATTATACAAAAGCCTAATTATTTTTAAAAAATAATGAAATTGAAAAAATATCTAATAATATGGAGGTGGGGTCAAGAGAGAGAATACAAATTACTAACTTACCGATATCAAGGATGACATAAGAAAGATCATGACAGACACTGCAGTCGCCAAGAGGATAATAAAAATCACTATGAGTAACTATACACAAATTTACAACATAGACAAAATGGGTTAATTACTCAAAAAGCACAAACTACCCCAATTTACACAAATACAAGCAGATAATTTGAATAGCTCTGTAACTTTATAAAAGTTGAATTTGTAATCTAAAATCAACTGAAAAAGAAGTCTCTAAGTCCAGATAATTTTGCTAGATAATGCTACACAAATAACATCAATTATACACAAACTCTTCGTAAATTTACAAAACAACAAATATGTCCCAATTCATTTTATGAGCCCATATTGCCCTGATACCAAAGACAAAGATAACATATAAATAAAACTACAGACAAATATAATTAATGAATATGGTTGCAAAAATCCTTAAGATAATATTCACACATAGAATTCAGCAATGTGCACTCATAATTATACACCGTAGCCAAGGAGAGTTTATTCTAGGGATCTAAGCCTTGTTCAATATTCTAACATCAACCAATGTATTCTACAATATTAACAGGTAAAAATAAAAATCACATGACCAGCTAAATTCACACACACAATAAAATTCAACACCTATTATAATAAAAATAAAACAACAGAAAATTAAAAATCATGAGAAACATCGTCCACTTGATGAAGTACAACTACAAAATCTTTAAGTTAAATAATCGCACTTAATGGTGATAGACTGAATGCTTTTCCATTAGAATAGGAAGATGGTAAATATGTCTGCACTCCCCGCTACTATTCATCTTAGTACTGGAAATCCTAGGCACCCAAATAAAGCAAGAAAGGGAATAAAAGGCATAGAGATTTGCAAGAAAGATACATAACTGTCCTTACTTCTCAGGTGATGTGATAGTCTATGCAGGATATCTCAAAGAACCTACCAAAACAAACTCTCAAACTGATAAGTGAGTTCAACAAAGTCAAAGTGTTCATAATAAACATACAAAAATAAACCAGAGTTATGTATACTACCAATTAACATACACAGAATGAAATTTTAAAAGTACACCAAAATTTAGAATCACTAAGAAAATAAAATGCTTAGGAAAAAAACTAACAAAGAA	20	PASS	ClusterIDs=HG2_PB_pbsv_2269:HG3_PB_pbsv_2253:HG4_PB_SVrefine2PBcRDovetail_1207:HG2_PB_assemblyticsPBcR_13615:HG2_PB_SVrefine2PBcRplusDovetail_5871:HG2_PB_SVrefine2PB10Xhap12_1737:HG2_PB_SVrefine2Falcon2Bionano_908:HG2_Ill_SVrefine2DISCOVARplusDovetail_6871:HG4_Ill_SVrefine2DISCOVARDovetail_1649:HG3_Ill_SVrefine2DISCOVARDovetail_1585:HG2_10X_SVrefine210Xhap12_1718:HG2_PB_assemblyticsfalcon_14037:HG2_PB_SVrefine2Falcon1plusDovetail_6354:HG3_PB_SVrefine2PBcRDovetail_1172:HG4_PB_assemblyticsfalcon_13844:HG4_PB_SVrefine2Falcon1Dovetail_1363:HG3_PB_SVrefine2Falcon1Dovetail_1413:HG2_PB_HySA_4268:HG4_PB_pbsv_2290;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1737:HG2_PB_SVrefine2PBcRplusDovetail_5871:HG2_PB_assemblyticsPBcR_13615:HG4_PB_SVrefine2PBcRDovetail_1207;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0495958;ClusterMaxSizeDiff=0.0474038;ClusterMaxEditDist=0.183405;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=3574;DistBack=-1;DistForward=2314;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:129929434-129929432;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2909.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:92:1/1:0:17:1:15:1/1:0:12:0:10:1/1:0:42:1/1:4:379:.:.:.
chr2	130046834	HG4_Ill_GATKHC_3664	T	TATATATATATATATATATATATATATATATATATATATATCTTTATATAC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_2765:HG2_PB_pbsv_2270:HG4_Ill_scalpel_2057:HG4_Ill_GATKHC_3664:HG4_Ill_GATKHCSBGrefine_1541:HG4_Ill_FB_1990:HG4_Ill_150bpfermikitraw_2896:HG2_Ill_GATKHC_3630:HG2_Ill_GATKHCSBGrefine_1479;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2765:HG4_Ill_scalpel_2057:HG4_Ill_GATKHC_3664:HG4_Ill_GATKHCSBGrefine_1541:HG4_Ill_FB_1990:HG4_Ill_150bpfermikitraw_2896:HG2_Ill_GATKHC_3630:HG2_Ill_GATKHCSBGrefine_1479;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0761905;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.152381;PBcalls=1;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=3;DistForward=7;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=2:130046831-130046872;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2910.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:35:./.:21:10:0:24:./.:2:5:0:11:0/1:15:32:./.:.:.:.:.:.
chr2	130443475	HG2_10X_SVrefine210Xhap12_1721	T	TATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCCACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCACTTGTTTGTCTGTAAAGGATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGATATCCACTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCACTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTTGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1415:HG2_PB_PB10Xdip_16472:HG2_PB_SVrefine2PBcRplusDovetail_5874:HG2_PB_SVrefine2PB10Xhap12_1740:HG2_PB_pbsv_2273:HG4_PB_assemblyticsfalcon_13850:HG2_PB_assemblyticsfalcon_14042:HG4_PB_SVrefine2Falcon1Dovetail_1365:HG2_PB_SVrefine2PBcRplusDovetail_5873:HG3_PB_SVrefine2PBcRDovetail_1174:HG2_PB_SVrefine2PB10Xhap12_1739:HG2_PB_SVrefine2Falcon2Bionano_910:HG2_PB_SVrefine2Falcon1plusDovetail_6356:HG2_10X_SVrefine210Xhap12_1721:HG4_PB_SVrefine2PBcRDovetail_1209;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1721:HG2_PB_SVrefine2Falcon1plusDovetail_6356:HG2_PB_SVrefine2Falcon2Bionano_910:HG2_PB_SVrefine2PB10Xhap12_1739:HG3_PB_SVrefine2PBcRDovetail_1174;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0410721;ClusterMaxSizeDiff=0.0410721;ClusterMaxEditDist=0.0974591;PBcalls=14;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=1425;DistBack=27719;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=2:130443476-130443482;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9993;PctRecOverlap=0.9958;SizeDiff=1;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=2911.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:18:0:18:./.:0:0:0:0:./.:0:0:1/1:18:338:.:1357:.
chr2	131579738	HG3_Ill_SVrefine2DISCOVARDovetail_1590	C	CTGTTAGCCAAGCGGGGTTACCATCAAGCGCAAGGCTGGTGTCTTCGCCCTCCTTGAGCTGGGGCCTCAAGTCAGCAGGGAAGAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6359:HG4_PB_HySA_3429:HG2_PB_HySA_4289:HG4_PB_SVrefine2Falcon1Dovetail_1367:HG4_PB_pbsv_2299:HG3_Ill_SVrefine2DISCOVARDovetail_1590:HG2_PB_pbsv_2281:HG2_PB_SVrefine2Falcon2Bionano_912;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6359:HG3_Ill_SVrefine2DISCOVARDovetail_1590:HG2_PB_SVrefine2Falcon2Bionano_912;NumExactMatchSVs=3;ClusterMaxShiftDist=0.144578;ClusterMaxSizeDiff=0.144578;ClusterMaxEditDist=0.272727;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=11841;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=336;REFWIDENED=2:131579739-131580074;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2912.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:25:0|1:28:1:0:18:./.:2:0:1:0:0/0:19:0:./.:.:.:.:.:.
chr2	131721478	HG2_PB_assemblyticsfalcon_14047	G	GGCCCGGAGCGGCGGCCGCGCGGCGACGAGGATGGGGCCGAGGACGCCGCGCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16487:HG4_PB_HySA_3430:HG3_PB_pbsv_2265:HG3_PB_HySA_3482:HG2_PB_HySA_4290:HG4_Ill_svaba_2807:HG2_PB_pbsv_2283:HG3_Ill_svaba_2842:HG2_Ill_svaba_2760:HG4_PB_assemblyticsfalcon_13858:HG4_Ill_Krunchall_3168:HG4_Ill_GATKHC_3677:HG4_Ill_GATKHCSBGrefine_1544:HG4_Ill_Cortex_1889:HG4_Ill_250bpfermikitraw_3021:HG4_Ill_150bpfermikitraw_2906:HG3_Ill_manta_478:HG3_Ill_Spiral_2375:HG3_Ill_Krunchall_3034:HG3_Ill_GATKHC_3740:HG3_Ill_GATKHCSBGrefine_1487:HG3_Ill_Cortex_1937:HG3_Ill_250bpfermikitraw_2975:HG3_Ill_150bpfermikitraw_2862:HG2_PB_assemblyticsfalcon_14047:HG2_Ill_manta_615:HG2_Ill_SpiralSDKrefine_8892:HG2_Ill_Krunchall_3031:HG2_Ill_GATKHC_3637:HG2_Ill_GATKHCSBGrefine_1483:HG2_Ill_Cortex_4480:HG2_Ill_250bpfermikitraw_3003:HG2_Ill_150bpfermikitraw_2770:HG4_PB_pbsv_2300;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2770:HG2_Ill_250bpfermikitraw_3003:HG2_Ill_Cortex_4480:HG2_Ill_GATKHCSBGrefine_1483:HG2_Ill_GATKHC_3637:HG2_Ill_Krunchall_3031:HG2_Ill_SpiralSDKrefine_8892:HG2_Ill_manta_615:HG2_PB_assemblyticsfalcon_14047:HG3_Ill_150bpfermikitraw_2862:HG3_Ill_250bpfermikitraw_2975:HG3_Ill_Cortex_1937:HG3_Ill_GATKHCSBGrefine_1487:HG3_Ill_GATKHC_3740:HG3_Ill_Krunchall_3034:HG3_Ill_Spiral_2375:HG3_Ill_manta_478:HG4_Ill_150bpfermikitraw_2906:HG4_Ill_250bpfermikitraw_3021:HG4_Ill_Cortex_1889:HG4_Ill_GATKHCSBGrefine_1544:HG4_Ill_GATKHC_3677:HG4_Ill_Krunchall_3168;NumExactMatchSVs=23;ClusterMaxShiftDist=0.169492;ClusterMaxSizeDiff=0.169492;ClusterMaxEditDist=0.264463;PBcalls=9;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=55;DistBack=37094;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=2:131721479-131721483;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2913.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:70:1/1:1:15:0:13:1/1:0:7:0:7:1/1:0:40:./.:.:.:.:.:.
chr2	131887306	HG2_Ill_SVrefine2DISCOVARplusDovetail_6876	A	ACCTCAGGTGATCCATCCGCCTTGACCTCCCAAAGTGCTGGGATTACAAGCTTGAGCCACCACACCCAGCCCAAGTGTTCTAGCTTTCTAAGGAATGCAGTTAAGTTGCATT	20	PASS	ClusterIDs=HG3_PB_HySA_3483:HG3_PB_pbsv_2266:HG2_PB_pbsv_2284:HG4_PB_SVrefine2Falcon1Dovetail_1369:HG4_Ill_GATKHCSBGrefine_1545:HG3_Ill_GATKHCSBGrefine_1488:HG2_Ill_SVrefine2DISCOVARplusDovetail_6876:HG2_Ill_GATKHCSBGrefine_1484:HG2_10X_SVrefine210Xhap12_1725:HG3_PB_SVrefine2PBcRDovetail_1176;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1725:HG2_Ill_GATKHCSBGrefine_1484:HG2_Ill_SVrefine2DISCOVARplusDovetail_6876:HG3_Ill_GATKHCSBGrefine_1488:HG4_Ill_GATKHCSBGrefine_1545:HG4_PB_SVrefine2Falcon1Dovetail_1369;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0807175;ClusterMaxSizeDiff=0.0627803;ClusterMaxEditDist=0.170404;PBcalls=5;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=111;DistBack=2;DistForward=46;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=2:131887307-131887360;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2914.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:./.:8:16:5:1:1|0:0:22:18:0:0/1:25:17:./.:.:.:.:.:.
chr2	136591011	HG2_PB_SVrefine2PB10Xhap12_1767	C	CTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCCGTCGCCCAGGCTGGAGTGCAGTCGTGCCATCTCGGCTCACTGAAAGCTCCGCCTCCTGGGTTAATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGAATAGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCGCAAAGTGCTGGGTTTACAGGCATAAGCCACTGCGACCGGCCTCTTTTTTTTTTTTTTTTTTTTTTGAAACAGGGTCTTGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTTGGCTCATTGCAGTCTCTGCCTCTCAGGCTCAAAATCCTTCTGCCTCAGCCTCCTGAGTAGCTGGGACTATAGGCATGTGCTTCCATGCCTGGCTAGTTTTTAAATTTTTTGTAGAGATATGGTGTCATTATATTTTCCAGGCTGATCTCAAACTCCCAGGCTCAAGCACTTCTCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCCACTGCACCCATTCCTAAACTTCTTTTTAAAGTCAGGGTGCTCTCAGGAAACTGCTGTTCCCCGATTCTTATTTATGGGAAAACATCAATACAGCCCCTACTGGGCACTGAGGGGAGAAACAAGGAAATATAAGCATGTGTGGCTTGTACCCACTTGCTTTGACATTGGATGACGTAACAGTGGTTCTGAAACTGTTGTGTACATCACCATCACCTACTGAGATTGTTAAAATGCCAATTTCAGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACTTGAGATTAGGAGTTCGAGACCAGCCTGGGTGACATAGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAAGTGTGGTGGAGTGCACCTGTGATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACTCGGGAGACAGAGGTTGCAGTGAGCCTAGACTGCACCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAGAAAAAAAAATGCCGATTTCAGGCCCTGCCCTTAGAGATTCAGAGTGAGCAGAGTAGAGTGGGCCCAGGCACATGCATTTTAACACACTTCTCGGGGGATTCTGATACAGTGGTCCTCAGACCATAATTTGAGAAACACTGTGTGGAGCTGGGATGGCTCAGCCGTTCTGTGTTGCTAGCGATGGATATAAATTTTCAACCCATATTGGATGTTCCTTGAGGAGCAAAACTTAAACATTTATTTAATCCCTCCAAGTATCAAGCTTAGGACTGGGTGGATAGAAAGTGCTCAGACCTGTGATTTGGAAACACGAAACAAAAATTGAATAAAACCGGAGTTTCAGATTTTAACAATAGGACCATATGGCTGTCTTCACTTTCACCCAAATTCTCTACAGAAGGAAGATATATACTCCACCAATGAAACCACCACAAACAACCATTACCAACTACAATAGTGCTTATTTTGATAAGCATAATGAATCTTTGAAATCCTTCTAGCATGGAATATCACTCGGAGATATTTAGTTCTCATTCTGACAAGATAACGTTTCCCAGTTATTTAATGGTTGTGCCCCATGGATCCGTTTCACATTCCACAGATTTCCAGACTTCAGACCATCATTGCTTCTGCAGATTAAACCGCTAATCTACTTCAGCGTCTCTATACATTTGCCTATTCGGGACATTTGTTGTAAATGTAAATTGTAAATGTAAATATGTGGTTGTGACTGGCCGCTTTCACTAGCATGTTTTCAAGGTTCATCTGTGTTGTATCATATATCAGAACTTCTTTCTGGCCAAGCACAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGAGGATCACTCCTCCTTTGGGAGGAGATGGGAGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAAATTAGCCAGGCGGGGTAGCGCATGCCTGTGGTGCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTAATTGAACTCGGGAAGTGGAGGTTGCAGTGAGCCATGATCGTGCCTCTGCACTGCAGCTTGGATGACAGAGCGAGACTCTGTCTAAAAAAAAAATTAATTAATTAATTAAATAAATAAAAGAACTTCTTTCTTTTTATTGCTAAATAATATTCGATTGTATGGATATATTAATATCACATTTTATTTATGCATCAGCTGATGGTCATTAGGTGTTTCCACTTTTGGTTTTTATGAATAACACTGCTATGAATGTTTGCGCACACATTTTTGTTTGGACATTTGTTCATTTCACTTGGATCTATACCTAGAAGAGGAATTGTTAAGCCATATGTTAACTCTAAAGTTTGAGGAAACACTGGGCTGTTTTCCAAAGTGGGTGCACCGTTGTTCATGGCCCCAGCAGTGTACACAGGTTCCATTCACTCCACAGTGTCACCAGCACTGTTATTGTCTGTCTTTTTAATTATAGCCCTCCTCGTAGGTGTGAAGCGGTATTCTGTTCTATTTTAATTGTTGGATTAAGTAGTTGGTTCATTGGCATTTCTTATAGTTTTTTTTTTTTTTTACTTTTAACCAAGTTATGTTATATAACATTTTTTATGTATATTAAATAATACATTTTTAAAAGAGCAATACATCTATAGGATTGGACTTAGAAGGGAAGTGAGAATGAGGGAGAGAGAGGGAAGAAAAACCACTTTTTAAAATAGTAAGGAGACTGAAAAAGAGAACTTATTCTGTGTCTTGCATGATATTGGGGACAGATATTTGGGGAAACACAAAATGAAGGGTAGAAAATAAGCAGAAGAAAAGAAGAAAGATATAAGTTTAAAAAGAGAGTCTTTAGTCACCTGATGGAAAGTAAAAATAAAATATGGAAAACACTTAAATAAACATGTACATATAGTTTTATAATTTAAAGAATTTTGTGGCATCCACCCTCAAAATAAGATTTTTCTTTATTTGAGATTATACTGTCTTTCCTTCTTTTTATTATTTTTCAATCCTGCTTCTTCTGTAGTCTTTCATTTTTTCTTTTCTTTTCTTTCCCCTTTCTTTCTCTTTCTTTCTTTCTTTTCTTCTTTCTTTCTTTCCTTTCTCTCTCTCTCTTCCTTTCTTTTTCTTTCTTTCCTTTTTTTTTTTTTCTCAGGGTCTGGCTTTGTCACCTAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAGCTTCTGCCGCCCGGGTTCCAGCGATTCTCTCACCTCATCCTCCCTTGTAGCTGGGATTACACATGCACACCACCACCCCTGGCTAATTTTTGTGATTTTTTTTTTTTTTTTGGTGGAGATGGGTTTTCGCCATGTTGGCCAGGCTGATCTCCAACTCCTGAGCTCAAACAAGCTGCCCACCTCGGCCTCCCAAAGCGCTGGGGTTACAGATGTGAGCCACTGCACCTGGTCTCATTCTTTCAAAGTTTATTTTACTCAGAGCTTCTTCAGTAGGATTGGAGCCAACACACGTCTTTGTGTTTATTTGCTGACTCGCCCCAAGACAGGCTCTGCAATGAGCGCAGTGGTTCTTCTTCATGGCGCTCCTAGGTTCAGGAAACCGTCTCCATGTCCAGAGCTCCGCTCTCCCTCAGACTGGGCCCCTTTCCTCTTTCTGGAGCCTGCTGTCTCCCTGCATTCCTGACTGCTCAAATGGTGGCCCAGGAACAGCCTTCCTGGCAACTCTGTCTAAAATACCCCCAGCCACTCTCACACTTTCTTCCCTTACCCTGTCTTTAAAAAAAAATCGTAGTAAAATACACATAACAGAAAAAGTACCATCTTAACTATTTTTTTTTTAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6369:HG2_PB_HySA_4342:HG2_PB_PB10Xdip_16536:HG4_PB_pbsv_2323:HG3_PB_SVrefine2PBcRDovetail_1184:HG3_PB_SVrefine2Falcon1Dovetail_1424:HG4_PB_SVrefine2Falcon1Dovetail_1378:HG2_PB_assemblyticsPBcR_13675:HG4_PB_SVrefine2PBcRDovetail_1217:HG4_Ill_SVrefine2DISCOVARDovetail_1678:HG3_Ill_SVrefine2DISCOVARDovetail_1618:HG2_PB_SVrefine2PB10Xhap12_1767:HG2_Ill_SVrefine2DISCOVARplusDovetail_6899:HG2_PB_SVrefine2PBcRplusDovetail_5898:HG2_PB_SVrefine2Falcon2Bionano_920:HG2_10X_SVrefine210Xhap12_1744;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6899:HG2_PB_SVrefine2PB10Xhap12_1767:HG3_Ill_SVrefine2DISCOVARDovetail_1618:HG4_Ill_SVrefine2DISCOVARDovetail_1678;NumExactMatchSVs=4;ClusterMaxShiftDist=0.213776;ClusterMaxSizeDiff=0.213776;ClusterMaxEditDist=0.267857;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=3961;DistBack=25274;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=309;REFWIDENED=2:136591012-136591320;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9997;PctRecOverlap=0.9768;SizeDiff=-1;StartDistance=-91;EndDistance=-91;GTMatch=0;TruScore=99;MatchId=2915.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:120:1/1:1:14:2:10:./.:0:3:1:4:1/1:0:28:1/1:2:488:.:3994:.
chr2	137346767	HG3_Ill_150bpfermikitraw_2890	G	GAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAC	20	PASS	ClusterIDs=HG3_PB_HySA_3521:HG3_Ill_250bpfermikitraw_3010:HG3_Ill_manta_485:HG3_Ill_Spiral_2408:HG2_PB_pbsv_2308:HG3_Ill_150bpfermikitraw_2890:HG2_Ill_250bpfermikitraw_3035:HG2_PB_assemblyticsPBcR_13685:HG2_PB_HySA_4349;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3035:HG3_Ill_150bpfermikitraw_2890:HG3_Ill_250bpfermikitraw_3010;NumExactMatchSVs=3;ClusterMaxShiftDist=0.357895;ClusterMaxSizeDiff=0.357895;ClusterMaxEditDist=0.357895;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=9;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=2:137346739-137346796;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2916.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:48:./.:12:34:12:3:./.:2:22:6:30:0/1:19:28:./.:.:.:.:.:.
chr2	138259792	HG3_Ill_GATKHCSBGrefine_1512	T	TTATCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_3486:HG2_PB_pbsv_2311:HG4_PB_pbsv_2329:HG2_PB_PB10Xdip_16545:HG3_PB_pbsv_2294:HG2_PB_SVrefine2PB10Xhap12_1771:HG2_PB_HySA_4361:HG3_PB_HySA_3532:HG4_PB_SVrefine2PBcRDovetail_1221:HG4_PB_SVrefine2Falcon1Dovetail_1383:HG4_Ill_MetaSV_2724:HG4_Ill_GATKHCSBGrefine_1568:HG3_PB_SVrefine2Falcon1Dovetail_1430:HG3_Ill_MetaSV_2770:HG3_Ill_GATKHCSBGrefine_1512:HG2_PB_SVrefine2Falcon2Bionano_924:HG2_Ill_MetaSV_2630:HG2_Ill_GATKHCSBGrefine_1503:HG2_PB_SVrefine2Falcon1plusDovetail_6373;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1503:HG2_Ill_MetaSV_2630:HG2_PB_SVrefine2Falcon2Bionano_924:HG3_Ill_GATKHCSBGrefine_1512:HG3_Ill_MetaSV_2770:HG3_PB_SVrefine2Falcon1Dovetail_1430:HG4_Ill_GATKHCSBGrefine_1568:HG4_Ill_MetaSV_2724:HG4_PB_SVrefine2Falcon1Dovetail_1383;NumExactMatchSVs=9;ClusterMaxShiftDist=0.107023;ClusterMaxSizeDiff=0.107023;ClusterMaxEditDist=0.175084;PBcalls=13;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=304;DistBack=14159;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=2:138259793-138259798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2917.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:41:./.:16:11:5:17:0|1:32:0:1:6:0/1:39:17:0/1:9:32:.:.:.
chr2	139380778	HG2_PB_SVrefine2Falcon1plusDovetail_6375	C	CAACAGCTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3210:HG2_PB_pbsv_2316:HG3_PB_assemblyticsfalcon_14140:HG4_PB_SVrefine2Falcon1Dovetail_1386:HG3_PB_SVrefine2Falcon1Dovetail_1433:HG2_PB_SVrefine2Falcon2Bionano_927:HG2_PB_SVrefine2Falcon1plusDovetail_6375:HG2_Ill_MetaSV_2633:HG2_PB_HySA_4374:HG3_PB_pbsv_2301;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6375:HG2_PB_SVrefine2Falcon2Bionano_927:HG3_PB_SVrefine2Falcon1Dovetail_1433;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0971787;ClusterMaxSizeDiff=0.0971787;ClusterMaxEditDist=0.207317;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=13177;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=2:139380779-139380788;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9937;PctRecOverlap=0.9937;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2918.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:26:./.:13:19:13:1:0|1:25:0:0:5:0/1:24:11:0/1:6:21:.:.:.
chr2	139634845	HG3_PB_SVrefine2Falcon1Dovetail_1434	T	TAAAAAGGAGAGGCCGGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGAGACCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_pbsv_2319:HG3_PB_SVrefine2Falcon1Dovetail_1434:HG3_PB_pbsv_2303:HG3_PB_assemblyticsfalcon_14143:HG2_PB_HySA_4381;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1434;NumExactMatchSVs=1;ClusterMaxShiftDist=0.123028;ClusterMaxSizeDiff=0.119874;ClusterMaxEditDist=0.217852;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=325;DistBack=4838;DistForward=38;DistMin=38;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=2:139634846-139634856;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9909;PctRecOverlap=0.9878;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2919.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:34:0|1:28:4:3:19:./.:28:0:0:3:./.:22:2:0/1:6:37:.:.:.
chr2	141290516	HG2_Ill_manta_628	T	TCTATATCTATATCTATATATATATATCTATATCTATATCTATATATATATATATATATATACACAC	20	PASS	ClusterIDs=HG2_PB_pbsv_2323:HG2_PB_HySA_4396:HG3_Ill_Spiral_2438:HG3_Ill_GATKHC_3827:HG3_Ill_GATKHCSBGrefine_1524:HG3_Ill_250bpfermikitraw_3052:HG2_Ill_manta_628:HG2_Ill_Krunchall_3099:HG2_Ill_GATKHC_3718:HG2_Ill_GATKHCSBGrefine_1513:HG2_Ill_150bpfermikitraw_2832:HG3_PB_HySA_3560:HG2_Ill_breakscan11_3213:HG2_PB_PB10Xdip_16549;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2832:HG2_Ill_GATKHCSBGrefine_1513:HG2_Ill_GATKHC_3718:HG2_Ill_Krunchall_3099:HG2_Ill_manta_628:HG3_Ill_250bpfermikitraw_3052:HG3_Ill_GATKHCSBGrefine_1524:HG3_Ill_GATKHC_3827:HG3_Ill_Spiral_2438;NumExactMatchSVs=9;ClusterMaxShiftDist=0.108527;ClusterMaxSizeDiff=0.0923077;ClusterMaxEditDist=0.210526;PBcalls=4;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=3;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:141290515-141290517;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2920.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:49:0|1:27:2:3:45:0|1:32:0:1:27:0/1:25:14:./.:.:.:.:.:.
chr2	141534055	HG2_PB_SVrefine2Falcon2Bionano_932	A	ATATAATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_3518:HG3_PB_HySA_3563:HG2_PB_PB10Xdip_16556:HG4_PB_pbsv_2344:HG2_PB_pbsv_2327:HG3_PB_pbsv_2309:HG2_PB_assemblyticsPBcR_13727:HG3_PB_assemblyticsfalcon_14155:HG2_PB_HySA_4408:HG2_10X_SVrefine210Xhap12_1753:HG4_PB_SVrefine2PBcRDovetail_1225:HG4_Ill_GATKHCSBGrefine_1576:HG2_PB_SVrefine2PBcRplusDovetail_5907:HG2_PB_SVrefine2PB10Xhap12_1777:HG2_PB_SVrefine2Falcon2Bionano_932:HG4_PB_SVrefine2Falcon1Dovetail_1387:HG2_PB_SVrefine2Falcon1plusDovetail_6378;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_932:HG2_PB_SVrefine2PB10Xhap12_1777:HG2_PB_SVrefine2PBcRplusDovetail_5907;NumExactMatchSVs=3;ClusterMaxShiftDist=0.202532;ClusterMaxSizeDiff=0.199052;ClusterMaxEditDist=0.243671;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=332;DistBack=9641;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=2:141534056-141534074;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2921.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:83:1/1:2:7:1:5:./.:0:3:0:4:1/1:0:20:1/1:2:55:.:.:.
chr2	141887521	HG3_Ill_SVrefine2DISCOVARDovetail_1636	T	TGGACTAGACGTAATAATTTTAATATTTATTTTAAAGGAATAGTGACAAAGCAAATGGATACAGAATTTAACCATACAAAAAAGCCATTAAAGTACTTCAAAAAATGTAAAAAATAATGTTGGCATGGGAGAGGTTTTATTTTTATTTTAAAACAAGGTAGAGTGGCCATTAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_4415:HG3_PB_assemblyticsfalcon_14159:HG3_PB_HySA_3568:HG2_PB_pbsv_2328:HG2_10X_SVrefine210Xhap12_1756:HG3_PB_SVrefine2Falcon1Dovetail_1436:HG3_Ill_SVrefine2DISCOVARDovetail_1636:HG3_PB_pbsv_2310;NumClusterSVs=8;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_1636;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0720222;ClusterMaxSizeDiff=0.0720222;ClusterMaxEditDist=0.298913;PBcalls=6;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=176;DistBack=26429;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=176;REFWIDENED=2:141887522-141887697;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2922.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:40:1|0:6:25:15:1:./.:1:0:0:24:0/1:8:13:./.:.:.:.:.:.
chr2	145953807	HG2_Ill_svaba_2858	T	TAGAATACTCTACAGCATCATAGTTTTTGTTTTACCTCCTTGTAGCTTTAATCATGTGTATTTACTAGTTATCTATTGGTAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_2338:HG3_PB_pbsv_2320:HG3_PB_assemblyticsfalcon_14190:HG4_Ill_svaba_2924:HG4_Ill_manta_543:HG4_Ill_Krunchall_3301:HG4_Ill_GATKHC_3815:HG4_Ill_GATKHCSBGrefine_1585:HG4_Ill_Cortex_1911:HG4_Ill_250bpfermikitraw_3153:HG4_Ill_150bpfermikitraw_3027:HG3_Ill_svaba_2953:HG3_Ill_manta_492:HG3_Ill_Spiral_2474:HG3_Ill_SVrefine2DISCOVARDovetail_1658:HG3_Ill_Krunchall_3158:HG3_Ill_GATKHC_3876:HG3_Ill_GATKHCSBGrefine_1534:HG3_Ill_Cortex_1957:HG3_Ill_250bpfermikitraw_3096:HG3_Ill_150bpfermikitraw_2974:HG2_PB_assemblyticsfalcon_14165:HG2_PB_assemblyticsPBcR_13764:HG2_Ill_svaba_2858:HG2_Ill_manta_632:HG2_Ill_SpiralSDKrefine_8981:HG2_Ill_Krunchall_3142:HG2_Ill_GATKHC_3768:HG2_Ill_GATKHCSBGrefine_1523:HG2_Ill_Cortex_4517:HG2_Ill_250bpfermikitraw_3117:HG2_Ill_150bpfermikitraw_2880:HG2_PB_PB10Xdip_16561:HG4_PB_pbsv_2355;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2880:HG2_Ill_250bpfermikitraw_3117:HG2_Ill_Cortex_4517:HG2_Ill_GATKHCSBGrefine_1523:HG2_Ill_GATKHC_3768:HG2_Ill_Krunchall_3142:HG2_Ill_SpiralSDKrefine_8981:HG2_Ill_manta_632:HG2_Ill_svaba_2858:HG2_PB_assemblyticsPBcR_13764:HG2_PB_assemblyticsfalcon_14165:HG3_Ill_150bpfermikitraw_2974:HG3_Ill_250bpfermikitraw_3096:HG3_Ill_Cortex_1957:HG3_Ill_GATKHCSBGrefine_1534:HG3_Ill_GATKHC_3876:HG3_Ill_Krunchall_3158:HG3_Ill_SVrefine2DISCOVARDovetail_1658:HG3_Ill_Spiral_2474:HG3_Ill_manta_492:HG3_Ill_svaba_2953:HG4_Ill_150bpfermikitraw_3027:HG4_Ill_250bpfermikitraw_3153:HG4_Ill_Cortex_1911:HG4_Ill_GATKHCSBGrefine_1585:HG4_Ill_GATKHC_3815:HG4_Ill_Krunchall_3301:HG4_Ill_manta_543:HG4_Ill_svaba_2924;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0591716;ClusterMaxSizeDiff=0.0591716;ClusterMaxEditDist=0.2;PBcalls=7;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=27;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=82;DistBack=43068;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:145953808-145953809;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2924.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:1/1:0:25:2:41:1/1:0:31:0:32:1/1:0:51:./.:.:.:.:.:.
chr2	146346966	HG3_Ill_SVrefine2DISCOVARDovetail_1659	T	TTAACACAGTTGAGAAGACTTGAGTTGGCCGGCTGTGATGGCTCACACCTGTAATCCCAGCACTTTGACAGGCTGAGGCAGGTGGATCACTTGAGGTTAGGAGTTCGAGAGCAGCCTGGCCAATATGGCAAAACCCCGTCTCTACTAAAAGTACAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3214:HG3_PB_pbsv_2321:HG4_PB_pbsv_2356:HG2_PB_pbsv_2339:HG2_PB_HySA_4457:HG4_PB_SVrefine2PBcRDovetail_1235:HG4_Ill_manta_544:HG4_Ill_GATKHCSBGrefine_1586:HG3_Ill_manta_493:HG3_Ill_SVrefine2DISCOVARDovetail_1659:HG3_Ill_GATKHCSBGrefine_1535:HG2_Ill_SpiralSDKrefine_8986:HG2_Ill_GATKHCSBGrefine_1524:HG2_10X_SVrefine210Xhap12_1768:HG4_PB_SVrefine2Falcon1Dovetail_1396:HG3_PB_HySA_3610;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1768:HG2_Ill_GATKHCSBGrefine_1524:HG2_Ill_SpiralSDKrefine_8986:HG3_Ill_GATKHCSBGrefine_1535:HG3_Ill_SVrefine2DISCOVARDovetail_1659:HG3_Ill_manta_493:HG4_Ill_GATKHCSBGrefine_1586:HG4_Ill_manta_544:HG4_PB_SVrefine2PBcRDovetail_1235;NumExactMatchSVs=9;ClusterMaxShiftDist=0.102236;ClusterMaxSizeDiff=0.089172;ClusterMaxEditDist=0.179567;PBcalls=7;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=158;DistBack=-1;DistForward=10918;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=2:146346967-146346967;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2925.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:21:0|1:47:0:0:20:0|1:18:0:0:13:0/1:12:5:./.:.:.:.:.:.
chr2	146374992	HG2_Ill_Krunchall_3148	A	AGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAG	20	PASS	ClusterIDs=HG3_PB_pbsv_2323:HG4_Ill_GATKHCSBGrefine_1589:HG2_PB_pbsv_2341:HG2_Ill_manta_633:HG4_PB_HySA_3553:HG2_Ill_Krunchall_3148:HG2_Ill_GATKHCSBGrefine_1525:HG2_Ill_250bpfermikitraw_3123:HG2_Ill_150bpfermikitraw_2887:HG4_PB_pbsv_2358:HG3_Ill_GATKHC_3883:HG3_Ill_GATKHCSBGrefine_1537:HG3_Ill_150bpfermikitraw_2980;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2887:HG2_Ill_250bpfermikitraw_3123:HG2_Ill_GATKHCSBGrefine_1525:HG2_Ill_Krunchall_3148:HG2_Ill_manta_633:HG4_Ill_GATKHCSBGrefine_1589;NumExactMatchSVs=6;ClusterMaxShiftDist=0.218487;ClusterMaxSizeDiff=0.218487;ClusterMaxEditDist=0.283333;PBcalls=4;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=9;DistForward=59;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=264;REFWIDENED=2:146374877-146375140;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2926.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:37:./.:18:6:2:31:./.:13:3:8:13:0/1:13:18:./.:.:.:.:.:.
chr2	147020924	HG2_PB_SVrefine2Falcon2Bionano_946	T	TAGCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGTGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATAACCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAAAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATAAAAAATAAAAATAAAAATAAAAATAAAAAAAAAGAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_2362:HG2_PB_pbsv_2345:HG2_PB_HySA_4467:HG3_PB_pbsv_2328:HG3_Ill_MetaSV_2779:HG2_PB_HySA_4466:HG2_PB_assemblyticsPBcR_13770:HG2_PB_assemblyticsfalcon_14177:HG3_PB_assemblyticsfalcon_14201:HG3_PB_HySA_3621:HG2_PB_HySA_4465:HG2_PB_SVrefine2PB10Xhap12_1787:HG2_PB_SVrefine2Falcon2Bionano_946:HG2_PB_SVrefine2PBcRplusDovetail_5917:HG2_PB_SVrefine2Falcon1plusDovetail_6388:HG4_PB_SVrefine2Falcon1Dovetail_1400:HG3_PB_SVrefine2Falcon1Dovetail_1446:HG4_PB_SVrefine2PBcRDovetail_1241:HG2_10X_SVrefine210Xhap12_1773:HG4_PB_HySA_3560:HG2_Ill_breakscan11_3216:HG2_PB_PB10Xdip_16570;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_946:HG2_PB_SVrefine2PB10Xhap12_1787;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0626999;ClusterMaxSizeDiff=0.0626999;ClusterMaxEditDist=0.20157;PBcalls=19;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=1526;DistBack=11159;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=2:147020925-147020930;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2928.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:111:./.:0:0:0:0:1/1:0:6:0:6:1/1:0:20:1/1:20:369:.:1480:.
chr2	147522924	HG2_10X_SVrefine210Xhap12_1774	A	AGGCACAGTGGCTTACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGGGAATGGATCACCTGAGGTCAGGAGTTTAAGACCAGCCTGGCCAACATGGCGAAACCACATCTCTACTAAAAGAAAACAAAAATTAGCCAGATATGGTAGTGGGCCCTTGTAATACCAACTACTCGGGAGGCTGAGGCAGGGAGAATTGCTTGAACCCAGAAGATGGAGGTTGCAGTGAGCCAAGATTGCACCATTGCACTCCAGCCTGGAAAACAGAGCAAGACTCCATCTTAAAAAAAAAAAAAAAAAAGTTCAACAGACCTCAAGCTAAAGAAACTGGAAGAAAATTACACAAAGGTACGTTCATTATATTTCTCAAAGAACTAAAAATAGAACTACCGTTTGGCCCAGCAATCCCATCACTGGACATACATTAAAAGAAAAATAAGTAGCAGGCTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1447:HG2_Ill_Spiral_143:HG3_PB_pbsv_2329:HG2_PB_pbsv_2346:HG2_PB_HySA_4470:HG3_Ill_MetaSV_2780:HG2_Ill_MetaSV_2640:HG2_PB_SVrefine2Falcon1plusDovetail_6389:HG3_Ill_SVrefine2DISCOVARDovetail_1668:HG2_10X_SVrefine210Xhap12_1774;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1774:HG3_Ill_SVrefine2DISCOVARDovetail_1668;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0418964;ClusterMaxSizeDiff=0.0374862;ClusterMaxEditDist=0.20022;PBcalls=5;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=447;DistBack=31290;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=293;REFWIDENED=2:147522925-147523217;PctSeqSimilarity=0.9598;PctSizeSimilarity=1;PctRecOverlap=0.528;SizeDiff=0;StartDistance=-211;EndDistance=-211;GTMatch=0;TruScore=82;MatchId=2930.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:34:0|1:33:1:3:28:1|0:0:8:16:0:0/1:11:9:0/1:6:15:.:.:.
chr2	148477006	HG3_PB_SVrefine2Falcon1Dovetail_1448	T	TAAAATGAAGAGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6390:HG2_PB_pbsv_2347:HG4_PB_pbsv_2363:HG3_PB_assemblyticsfalcon_14208:HG4_Ill_MetaSV_2735:HG3_PB_pbsv_2330:HG2_PB_HySA_4473:HG4_PB_HySA_3564:HG2_Ill_breakscan11_3217:HG4_PB_SVrefine2Falcon1Dovetail_1401:HG4_Ill_GATKHCSBGrefine_1594:HG3_PB_SVrefine2Falcon1Dovetail_1448;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1448:HG4_Ill_GATKHCSBGrefine_1594;NumExactMatchSVs=2;ClusterMaxShiftDist=0.133956;ClusterMaxSizeDiff=0.133956;ClusterMaxEditDist=0.214605;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=2962;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=2:148477007-148477019;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2931.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:34:0|1:26:0:1:24:1|0:0:8:29:0:0/1:15:8:0/1:7:37:.:.:.
chr2	149591746	HG2_Ill_GATKHCSBGrefine_1530	C	CTTTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_14214:HG3_Ill_GATKHCSBGrefine_1541:HG2_PB_pbsv_2348:HG4_Ill_GATKHC_3851:HG4_Ill_GATKHCSBGrefine_1596:HG2_Ill_manta_636:HG2_Ill_GATKHCSBGrefine_1530;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1530:HG2_Ill_manta_636:HG4_Ill_GATKHCSBGrefine_1596:HG4_Ill_GATKHC_3851;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0793651;ClusterMaxSizeDiff=0.0634921;ClusterMaxEditDist=0.234375;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=27;DistForward=24516;DistMin=27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=2:149591745-149591748;PctSeqSimilarity=0.9606;PctSizeSimilarity=0.9231;PctRecOverlap=0.9385;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=2932.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:22:./.:6:13:15:3:./.:4:9:12:8:0/1:7:16:./.:.:.:.:.:.
chr2	150762719	HG3_Ill_SVrefine2DISCOVARDovetail_1687	A	GAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAAAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1404:HG3_PB_SVrefine2Falcon1Dovetail_1451:HG3_PB_SVrefine2Falcon1Dovetail_1452:HG3_PB_assemblyticsfalcon_14217:HG3_PB_SVrefine2PBcRDovetail_1192:HG3_Ill_SVrefine2DISCOVARDovetail_1687:HG2_PB_SVrefine2Falcon2Bionano_948;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_948:HG3_Ill_SVrefine2DISCOVARDovetail_1687:HG3_PB_SVrefine2PBcRDovetail_1192;NumExactMatchSVs=3;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.215385;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=134;DistBack=0;DistForward=4;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=2:150762680-150762732;PctSeqSimilarity=0.9832;PctSizeSimilarity=0.9781;PctRecOverlap=0.9051;SizeDiff=-3;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=95;MatchId=2933.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:31:0|1:16:5:2:24:./.:2:5:19:8:0/1:26:11:./.:.:.:.:.:.
chr2	151447531	HG2_10X_SVrefine210Xhap12_1786	TCAAATGTTCAT	GGGAGTCATCTCTCTCATCTCTTTGAAAGAAGATGTGTATGTTTAGGAAAGAAAGCAGACTGTAGGATGTTGTCATTGCCCCAGTACAGCTGTATGTACAGCTAACATTCACAAGATATCAAGACCAGGAAAAAAATATTCCAGAAAACTAAATTTTCTCCATAACTTTCTAAAGAAAAGCACTTTATGAAAACATTCTGCTTAGTGGCTGAAGCTTGCTGTACATAATTGTGTTAATCGATGAAAGAAGTTAACTATAGGAAACTTTCTCCATCTCAGGAAGACTTAATAAGCTTCTATGCTATTTTCAATTCTGTTTCATATGTATATATATATATACTTTTTTTTTTTTTTTTTGAAACAGAGTCTTGCTCTGTCACCCAGGTTGGAGTGACATGATCTCAGTGGCATGATCTCAGTTCACTACAACCTCCACCTCTCGGTTTCAAGTGATTCTCCTGCCTCAGCCTGGGGTTACAGGCGCCTGCCACCACGCCCAGCTAATTTTGGTATTTTTAGTAGAGATGGAGTTTCACTGTGTTGGCCAGGCTGGTTTTGAACTCCTGACCTCAAGTAATCTGCCCACCTCGGCCTCCAAAATTGCTGGGATTACAGGCGTGAGCCACCATGCCCAGCCAATGTTTCTTTAATCTTTTTAAAACCCAATAATAAACCCAGATCAGATATTATATTTTGCCCTGATATTAAAAAAATAAAAGTTTACTTGAATTATGTATAAAGTCATTATAAAAGACATGGACTTTAATAAGAATCTCTTTATAGACAGAATTTCATTGATTTTTCTTCCAGAGTTCAGACAACTTTATTTATTATCTGAATTGTTACTGTCTTAGAGTTACAGTTGAACTTAGCTAAAATAGAACTGAAAAACTCTTTAGAATGTTCTGATTCTCA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2642:HG2_PB_pbsv_2356:HG3_PB_SVrefine2PBcRDovetail_1194:HG3_Ill_Spiral_2502:HG3_Ill_SVrefine2DISCOVARDovetail_1690:HG2_Ill_Spiral_145:HG2_Ill_SVrefine2DISCOVARplusDovetail_6949:HG2_10X_SVrefine210Xhap12_1786:HG2_PB_SVrefine2Falcon2Bionano_950:HG2_PB_SVrefine2Falcon1plusDovetail_6391:HG3_PB_assemblyticsfalcon_14221:HG3_PB_SVrefine2Falcon1Dovetail_1455:HG4_PB_assemblyticsfalcon_13997:HG4_PB_SVrefine2Falcon1Dovetail_1405:HG3_PB_pbsv_2340:HG3_Ill_MetaSV_2785;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1786:HG2_Ill_SVrefine2DISCOVARplusDovetail_6949:HG2_Ill_Spiral_145:HG3_Ill_SVrefine2DISCOVARDovetail_1690:HG3_Ill_Spiral_2502:HG3_PB_SVrefine2PBcRDovetail_1194;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0368165;ClusterMaxSizeDiff=0.0368165;ClusterMaxEditDist=0.192849;PBcalls=9;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=903;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:151447543-151447530;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9989;PctRecOverlap=0.9858;SizeDiff=-1;StartDistance=3;EndDistance=14;GTMatch=0;TruScore=99;MatchId=2934.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:38:0|1:25:2:0:29:1|0:0:20:22:0:0/1:29:13:0/1:33:60:.:.:.
chr2	151926091	HG4_Ill_MetaSV_2737	A	AAAAAATTCTCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1788:HG4_PB_assemblyticsfalcon_14003:HG4_PB_pbsv_2370:HG4_PB_SVrefine2Falcon1Dovetail_1407:HG2_PB_pbsv_2359:HG2_Ill_breakscan11_3218:HG2_Ill_MetaSV_2644:HG2_PB_SVrefine2Falcon1plusDovetail_6393:HG4_Ill_MetaSV_2737:HG4_Ill_GATKHCSBGrefine_1600;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1788:HG4_Ill_MetaSV_2737:HG4_Ill_GATKHCSBGrefine_1600;NumExactMatchSVs=3;ClusterMaxShiftDist=0.065625;ClusterMaxSizeDiff=0.0469484;ClusterMaxEditDist=0.164852;PBcalls=5;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=317;DistBack=10262;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:151926092-151926106;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2935.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:37:1|0:3:19:30:6:0|1:27:0:0:9:0/1:30:18:0/1:6:45:.:.:.
chr2	151989912	HG2_10X_SVrefine210Xhap12_1789	G	GAAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAGGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAACGAAGGAAGAAAGAAAGAAAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	20	PASS	ClusterIDs=HG2_PB_pbsv_2360:HG3_Ill_SVrefine2DISCOVARDovetail_1694:HG2_10X_SVrefine210Xhap12_1789:HG4_PB_SVrefine2Falcon1Dovetail_1408:HG3_PB_SVrefine2Falcon1Dovetail_1457:HG4_Ill_SVrefine2DISCOVARDovetail_1742:HG4_PB_pbsv_2371:HG3_PB_pbsv_2343;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1789:HG3_Ill_SVrefine2DISCOVARDovetail_1694;NumExactMatchSVs=2;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.172691;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=247;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=2:151989913-151989913;PctSeqSimilarity=0.9433;PctSizeSimilarity=0.9427;PctRecOverlap=0.7338;SizeDiff=-15;StartDistance=-62;EndDistance=-62;GTMatch=0;TruScore=87;MatchId=2936.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:27:0|1:26:1:2:23:./.:0:7:29:2:0/1:10:8:./.:.:.:.:.:.
chr2	153248265	HG3_PB_assemblyticsfalcon_14240	TTAATAATAATGTTG	GCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCACGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAATAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3219:HG2_PB_PB10Xdip_16596:HG4_PB_pbsv_2381:HG3_PB_pbsv_2351:HG4_PB_HySA_3595:HG2_PB_SVrefine2PB10Xhap12_1803:HG2_PB_HySA_4504:HG4_PB_assemblyticsfalcon_14016:HG3_PB_assemblyticsfalcon_14240:HG4_PB_SVrefine2Falcon1Dovetail_1413:HG2_PB_pbsv_2369:HG3_PB_SVrefine2Falcon1Dovetail_1462:HG4_PB_SVrefine2PBcRDovetail_1245:HG2_PB_SVrefine2Falcon1plusDovetail_6400:HG2_PB_SVrefine2Falcon2Bionano_960;NumClusterSVs=15;ExactMatchIDs=HG3_PB_assemblyticsfalcon_14240:HG4_PB_assemblyticsfalcon_14016;NumExactMatchSVs=2;ClusterMaxShiftDist=0.216216;ClusterMaxSizeDiff=0.216216;ClusterMaxEditDist=0.252941;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=297;DistBack=-1;DistForward=-14;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:153248280-153248264;PctSeqSimilarity=0.9615;PctSizeSimilarity=0.8839;PctRecOverlap=0.9228;SizeDiff=-39;StartDistance=0;EndDistance=14;GTMatch=0;TruScore=92;MatchId=2937.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:31:./.:9:20:18:5:./.:28:0:7:4:./.:28:4:0/1:10:29:.:.:.
chr2	153576548	HG2_Ill_Krunchall_3197	G	GTCAGTCTTAAATGATTGGCTGCCAATGTTTCATTTCTTTATCATTCCCCTCCCCCCTTTTTTACCCTTTTTTGAATGTGCATGGAATGTAAATTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1802:HG4_PB_HySA_3597:HG3_PB_HySA_3663:HG3_PB_pbsv_2352:HG2_PB_pbsv_2370:HG4_Ill_manta_554:HG4_PB_pbsv_2382:HG4_Ill_Krunchall_3357:HG4_Ill_GATKHC_3882:HG4_Ill_GATKHCSBGrefine_1606:HG4_Ill_250bpfermikitraw_3207:HG4_Ill_150bpfermikitraw_3084:HG3_Ill_manta_504:HG3_Ill_Krunchall_3212:HG3_Ill_GATKHC_3938:HG3_Ill_GATKHCSBGrefine_1557:HG3_Ill_250bpfermikitraw_3147:HG3_Ill_150bpfermikitraw_3026:HG2_Ill_manta_643:HG2_Ill_Krunchall_3197:HG2_Ill_GATKHC_3828:HG2_Ill_GATKHCSBGrefine_1543:HG2_Ill_250bpfermikitraw_3171:HG2_Ill_150bpfermikitraw_2929:HG2_PB_HySA_4508:HG2_PB_PB10Xdip_16597:HG2_Ill_breakscan11_3220:HG2_PB_SVrefine2Falcon1plusDovetail_6401:HG4_PB_SVrefine2PBcRDovetail_1246:HG4_PB_SVrefine2Falcon1Dovetail_1414:HG4_Ill_SVrefine2DISCOVARDovetail_1755:HG3_Ill_SVrefine2DISCOVARDovetail_1705:HG2_PB_SVrefine2PBcRplusDovetail_5930:HG2_PB_SVrefine2PB10Xhap12_1804:HG2_PB_SVrefine2Falcon2Bionano_961:HG2_Ill_SVrefine2DISCOVARplusDovetail_6963;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2929:HG2_Ill_250bpfermikitraw_3171:HG2_Ill_GATKHCSBGrefine_1543:HG2_Ill_GATKHC_3828:HG2_Ill_Krunchall_3197:HG2_Ill_manta_643:HG3_Ill_150bpfermikitraw_3026:HG3_Ill_250bpfermikitraw_3147:HG3_Ill_GATKHCSBGrefine_1557:HG3_Ill_GATKHC_3938:HG3_Ill_Krunchall_3212:HG3_Ill_manta_504:HG4_Ill_150bpfermikitraw_3084:HG4_Ill_250bpfermikitraw_3207:HG4_Ill_GATKHCSBGrefine_1606:HG4_Ill_GATKHC_3882:HG4_Ill_Krunchall_3357:HG4_Ill_manta_554;NumExactMatchSVs=18;ClusterMaxShiftDist=0.103627;ClusterMaxSizeDiff=0.0932643;ClusterMaxEditDist=0.231156;PBcalls=13;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=95;DistBack=-67;DistForward=65136;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=93;REFWIDENED=2:153576525-153576617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2938.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:67:1/1:3:26:0:15:1/1:1:34:0:30:1/1:0:52:./.:.:.:.:.:.
chr2	154752581	HG2_Ill_GATKHCSBGrefine_1548	A	AGGATGATTTTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTAATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_3673:HG3_PB_HySA_3674:HG2_PB_pbsv_2376:HG3_PB_assemblyticsfalcon_14248:HG2_PB_assemblyticsPBcR_13820:HG2_Ill_breakscan11_3221:HG4_PB_pbsv_2387:HG2_PB_HySA_4512:HG3_PB_pbsv_2359:HG2_PB_PB10Xdip_16605:HG4_PB_HySA_3602:HG3_PB_SVrefine2Falcon1Dovetail_1466:HG3_PB_SVrefine2PBcRDovetail_1206:HG2_PB_SVrefine2Falcon2Bionano_964:HG2_PB_SVrefine2Falcon1plusDovetail_6405:HG2_PB_SVrefine2PB10Xhap12_1808:HG2_PB_SVrefine2PBcRplusDovetail_5932:HG2_10X_SVrefine210Xhap12_1807:HG4_Ill_MetaSV_2744:HG4_Ill_GATKHCSBGrefine_1610:HG2_Ill_MetaSV_2651:HG2_Ill_GATKHCSBGrefine_1548;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1548:HG2_Ill_MetaSV_2651:HG4_Ill_GATKHCSBGrefine_1610:HG4_Ill_MetaSV_2744;NumExactMatchSVs=4;ClusterMaxShiftDist=0.218891;ClusterMaxSizeDiff=0.218891;ClusterMaxEditDist=0.295031;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=331;DistBack=35575;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:154752582-154752595;PctSeqSimilarity=0.991;PctSizeSimilarity=0.9851;PctRecOverlap=0.9822;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2939.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:81:1/1:0:28:0:34:./.:0:5:0:2:1/1:0:17:1/1:3:75:.:.:.
chr2	158510355	HG3_PB_SVrefine2PBcRDovetail_1211	T	TAAGAAAGTAAGAGAGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCTGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_2399:HG4_PB_HySA_3625:HG4_PB_assemblyticsfalcon_14046:HG3_PB_assemblyticsfalcon_14266:HG2_PB_pbsv_2384:HG4_PB_SVrefine2PBcRDovetail_1251:HG4_Ill_MetaSV_2751:HG3_PB_SVrefine2PBcRDovetail_1211:HG3_Ill_MetaSV_2800:HG3_Ill_GATKHCSBGrefine_1571:HG2_Ill_MetaSV_2660:HG2_Ill_GATKHCSBGrefine_1555:HG2_PB_HySA_4535:HG3_PB_HySA_3694:HG3_PB_pbsv_2371:HG2_Ill_breakscan11_3222:HG4_PB_SVrefine2Falcon1Dovetail_1427:HG3_PB_SVrefine2Falcon1Dovetail_1477;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1555:HG2_Ill_MetaSV_2660:HG3_Ill_GATKHCSBGrefine_1571:HG3_Ill_MetaSV_2800:HG3_PB_SVrefine2PBcRDovetail_1211:HG4_Ill_MetaSV_2751;NumExactMatchSVs=6;ClusterMaxShiftDist=0.173252;ClusterMaxSizeDiff=0.173252;ClusterMaxEditDist=0.27417;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=325;DistBack=46485;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:158510356-158510372;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2940.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:36:./.:15:16:15:7:0|1:33:0:1:10:0/1:22:17:0/1:7:46:.:.:.
chr2	158773839	HG4_PB_SVrefine2Falcon1Dovetail_1429	G	GGTCTCTACTAAAAATACAAAAATTAGCCAGACGTGGTGGCACACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATGGCTTGAACCCGGGGTGGAGGTTGCAGTGAGCGGAGATGCGCCTCTGCACTCCAGCCTGGGCTACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAATTGCCTCATTGAAACCTGAAGAAACAGGACTAGGTTTCCACCCACCAATCCTCCGATTTAATTCATTAATGTTGCTCTTAAAGTATGTGCCCCTAAATGGGCAGATTACTCCAGACAATGTGGTACCATTAACTCCCACCCAGCACAGTGCCTGCCAATGGAATACATGCTAAACAAGTATTTGTTGAACAAATGCAGCTGGAGACTGCACTAACATTTTTAGCAGATGCATAATAATTATATCCAGTTCGGTGAACTAAAAATCCGTAGAAGAGCCGGGCGCGGTGGCTCACGCCAGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCTGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAATATAAAAAATAGCCGGGCGTGGTGGCGGCGCCTGTAGTCCCAGGCTACTCGGGAGGCGGAGCGGAGAACGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAAATCGCGCCACTGCACTCCAGCCTGGGCTACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAATCCGTAGAAGATTGTAATACAATTTTTTTTTTTTTTTTTTTTGAGACGGAGTATCGCTCTGTCGCCCGGACTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGAGTAGCTGGGACTACAGGCCCCTGCCACCACGCCCGGCTAATTTTTCGTGTTTTCCGTAGAGACAGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTTGGCCTCCAAAGTGCTGGGATTACAGGCCTGAGCCACCACGCCTGGCCCTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCTGGGCTCACTGCAACCTCTACGTCCAGGGTTCAAGTGATTCCTCTGCCTCAGCCTCCGAAGTAGTTGGGATTATAGGCACCTGCCACCATGCCCAGCTAATTTTGTATTTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGAGTTCAAGGGATCTGCCTGCCTCGGCATCTCAATGTGCTGGGATTACAGGCATGAGCCACTGTGCCCAGGCACATTTTAATATAAATTGATGCCAACACTGTTGTTCTTCACTCTGTATCTGAGCAATTGCATAGTGTATGAAGTTTTCCTTTAAATTTTTCTTTTAACCTAAATAATTGAGTTTAGGAGACTCTAGCCTAGATTGCACTCAGCCGAGGTGATTTTTTTTTCTACTTTATTTTTTTTTATTTTATTTTTGAGACGAGTTCTTGCTATGTTGCTCAGGCTGATCTCAAAGGCCTGGGCTTAAGTGATCCACCCACCTCCTCCCAAAGTGCTAGGATTGCAAGCATGAGCCACTGCGCCCGGCCAGGTGAGGTGATTTTTAAGTTTCCGTCATTTGTCATGTCAGTTATTCTTCCTATTTTGGTAAGAACCTCAAAAAAGCTATACATTCCTTCTGGGCCTTCATATGCATCAAATAGCAAAATGTTGACTGTAACAGCACAAGCGGAAAGAACTCTAGGTTACCCTATTGTTTGCTAAAAGGAATCACTCTGTTCCCTTCTTTGCATGCCTAACTTGATCCACGAAATAAGACCTTCTGCCCTTGCAGAAATGTCAGGATCGTAACTTCTACTGCTTCTAGTTCACTCCTTCTACCTCCAACCATGCTTGATGGTTGGTCAATTTTGGAGAAGGAACTGAAGCTGCCTCAACAAGCCCTCTCTGAATTCCTTGAAGTTGCCTCTGTGCAGGACACGTGCATTCTCCTCTTCCACCAATCACTGAGCTGCCCCTGAATAGGAGGCCAGAGTGGTTCAGCTGTGCCTGTGACTGGAGGGGATGTTTAACTGTGTCAGGCCTGGAATATTAGCAAGGATTAAGGGCCAGGTTGTGGACACATAACAAGCCACATTCTCTTATCAGTTTAACCAAAAACAGAGGTGAGGTTTGTTTTCCCCATCTGGATGACACCTGTGTTTACTTATTCATCGCTTCAGAACTTAGATGGGTAAGAGCGACTTGTTATTAATGGACTGTTCCCAAAGCTCAATCTTAACACCCAAGATTGATTGTTCAACAGCTTTAAGTCTATCAAAACATATTATTATTGAGGCCTTCAACAAATTCCAGAAAAAGTAAGTCTATCATAGTCCCCTACCCTGACAACTTAATAGTCCAAACTAAAAAAGGAAAGGTAACGTTTGGTTCATTTTAGTTCAAAAGTATGACTTATTTTGAACAAACTGATCATAATATGAAGTGATTATTATGTTCCTTTTAAAACTTTTTTTTTTTTCCTGAGATAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGAAGCTGGGACTACAGGCGCCCACCACCATGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGATGGGATTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACCTGCCTTGGCTTCCCAAAGTCCTGGGATTACAGGCATGAGCCACCGCTCCCAGCCTAAAACTTTAAAAAAATTATAAATTAACTGTTGATTAGTAAAATCTAGATGAGTATTAGAAAGAATTGGGGGCCAGGCACAGTGGCTCGTGCCTGTAATCCCAGCACTTTGGGTAGATCACTTGAACCCAGGGTCTCAAGACCAGACTGAGCAACATGACAAAACCCTGTCTCTACAAAAAATTTAAAATAATTAGCCGGGCATGGTTGCACACCTGTAGTCCCAGTTATTCAGAAGGCTGAGGTGGGAGGATCCCTTGAGCCCAGAAGATTGAGGCTGCAGAGAGCTATGATTGCACAACTGCACTCCAGCCTGGGCGACAGAGTGAGACCCTGTCTCCAAGAAAATAAAAAAAAAAAAAAAAAAAAAGAACTGGCCTCAAACCTCAAACTTTCACATTTGTACTTTCTGTGATTCCCACTTTTTCTCCTTTCTGAAAATCAGACTACTTACCCCTTTCTTGTCTTTGGAAGCCACTCCCATGAGCCACACTTCCTCTGAGATTGCCCATTGTAGTAGTTACATGGTACCTGAATTTCCTTCAGACCCATGGAGTGTAATTCTCAAGGTCTAGACACTTGAACTCATAAAAACCACCAGGTGAAATCTTGTCTCTCTTGGGCAAACTAAAACAAACTATGGCAACTGTCATTCGTAGTTTTCAACTATGAATAGACTGAGAAATACATGGTAGGTAGTAATTTGCTATTTTGCTGAGGCATTGGACTCTGGCCCACTGTCATAATTGTAAGTGACATAAGCTTGCCTAGCTGAGCCCAGCCAACTGCCTAACATGCCGTCTCAACTGTGTGCTTCGTATTCTTATCCTTTTCTCTTCACAGTGATTATGTCTTTTCTGTCTGTATGAAAATGATGATGAACAGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGTCAAGGCAGGTGGATCACCTGAGGTCAGGAGTTTGAGACCCGCCTGGCCAACATGGTGAAACCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1815:HG2_PB_HySA_4540:HG4_PB_pbsv_2401:HG3_PB_pbsv_2373:HG2_PB_pbsv_2386:HG4_PB_HySA_3628:HG3_PB_HySA_3696:HG2_PB_HySA_4539:HG2_Ill_breakscan11_3223:HG2_PB_HySA_4538:HG2_PB_PB10Xdip_16615:HG4_PB_HySA_3627:HG3_PB_assemblyticsfalcon_14269:HG4_PB_assemblyticsfalcon_14049:HG4_PB_SVrefine2Falcon1Dovetail_1429:HG3_PB_SVrefine2Falcon1Dovetail_1479:HG2_PB_SVrefine2Falcon2Bionano_971:HG2_PB_SVrefine2PBcRplusDovetail_5940:HG3_PB_SVrefine2PBcRDovetail_1213:HG2_PB_SVrefine2Falcon1plusDovetail_6414:HG4_PB_SVrefine2PBcRDovetail_1253;NumClusterSVs=21;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_1429;NumExactMatchSVs=1;ClusterMaxShiftDist=0.155076;ClusterMaxSizeDiff=0.155076;ClusterMaxEditDist=0.197462;PBcalls=20;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=3915;DistBack=-6;DistForward=-1;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=190;REFWIDENED=2:158773840-158774029;PctSeqSimilarity=0.9941;PctSizeSimilarity=0.9954;PctRecOverlap=0.9644;SizeDiff=-18;StartDistance=-131;EndDistance=-131;GTMatch=0;TruScore=98;MatchId=2941.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:108:1/1:0:23:0:20:./.:1:0:0:1:./.:1:12:1/1:7:485:.:3878:.
chr2	159188988	HG2_10X_SVrefine210Xhap12_1824	T	TTATGTGTCTTGGAGTTGCTCTTCTCAAGGAGTATCTTTGTGGCATTCTCTGTATTTCCTGAATTTGAATGTGGGCCTGCCTTGCTAGATTGGGGAGGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCCCGTCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGTTCGTTTCTTTTTATTCTTTTGTCTCTTAACTTCTCTTCTCGCTTCATTTCATTCATTTGATCTTCCATCACTGATACCCTTTCTTCCAGTTGATCGAATCAGCTACTGAGGCTTGTGTAGTTCTCATGCCTTGGTTTTCACCTCCATCCGGTTCTTTAAGGCCTTCTCTGCATTGGTTATTCTAGTTAGCCATTCGTCTAATTTTTTTTCAAGGTTTTTAACTTCTTTGCCATGGGTTCGAACTTCCTCCTTTAGCTTGGAGTAGTTTGATTGTCTGAAGCCTTCTTCTCTCAACTCGTCAAAGTCATTCTCTGTCCAGCTTTGTTCCATTGCTGGTGAGGAGCTGTGTTCTTTTGGAGGAGAAGAGGCACTCTGATTTATAGAGTTTCCAGTTTTTCTGCTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACCTTTGGTCTTTGATGATGGTGACATACAGATGGGGTGTTTTGGTGTGCATTTCCTTTCTGTTTGTTAGTTTTCCTTCTAACAGTCAGGACCCTCAGCTGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTATCAGCAGCGGAGCCTGCAGAACAGCAGATATTGGTGAACAGCAAATGTTGCTGCCTGATCGTTCCTCTGGAAGTTTTGTCTCAGAGGAGTACCCGGCCGTGTGAGGTGTCAGTCTTCCCCTACTGGGGGGTGCCTCCCAGTTAGGCTACTCGGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGTCCGTTCTCAGATCTCCAGCTGCATGCTGGGAGAACCACTACACTCTTCAAAGCTGTCTGACAGGGACATTTAAGTCTGCAGAGGATTCTGCTGCCTTTTGTTTGGCTATGCCCTGCCCCCAGAAGTGGAGTCTACGGAGGCAGGCAGGCCTCCTTGAGCTGCGGTGGGCTCCACCCAGTTTGAGCTTCTGGGCTGCTTTACCTACTGAAGCCTTGGCAATGGCGTGCACCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGGTAGCAATGAGGGAGGCTCTGTGGGCGCAGGACCCTCCGAGCCAGGCACGGGATATAATCTCCTGGTGTGCCGTTTGCTAAGACCATTGGAAAAGTGCAGTATTAGGGTGGGAGTGGCCCGATTTTCTAGGTGCCATCTGTCACCCCTTTCTTTGACTAGGAAAGGCAATTCGCTGACCCCTTGTGCTCCCTGGGTGAGGTGATGCCTCGCCCTGCTTCAGCTCAAGCTCGGTGCGCTGCACTCACTGTCCTGCACCCACTTTCTGACACTCCCCAGTGAGATGAACCCAGTACCTCAGTTGGAAATGCAGAAAACACCCGTCTTCTGCATCACTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTATTCAGCCATCTTGGCTCTCCTTTCAAATTATCTTATTTCTTTAGATTTTTTTCCATTGATTGCCATGAGTTTTTCTTGTAAAAACTCACTATCTGCAAATAAGATAATTCTACCTATACTTTATAACTCTAATATCTTTCTCTTGTCTAATTGTGTTGCCTAGTATTTCCAGAATAATATTAAATAATGGTGGTGATTACAGACTTGTTTCTCACTAACAAAAATGCTCTATTGTATTCCCATTAAGTTTTTGGAAGTTAATATATTTTGTTATAGGAAAAATGTATTCATCTATTCCTTTTATATTTTTAAAGAATAAGTGTTAGCTTTTTAATGACATTTCAGTGTTCATGAAGATAAGCCATAATAGATATCTTTACCTTAACTATTTTAAGGTGCTGGAATCATGACAGTGAATATTTTACTTAGAATTTTTGTATTAATAGATATAAGTGAGATTGGGGCATAATTTTTGTATGTGTGCAATTTTTTCAAGATTTTCTATCAATATTATACTTGCTTCATGAACATAACTTAGAAGTTTCCCTCCTTTTTCTATGCTCTGAAACAGTTAAATAGCAATGACATTTTTATTTTTTTCTCTGTGTTTAATAAACTTTATATTCTTAGCACAGTTTTGGAGTCACACCAAATTAAGCAGAAAGTATAGAGAGTTCCCACTTATCCTCAGCCCCCATGCAAAATAAAACCTCTTCCACTGTAAGTATTCCTCGCCAGAGAGTACATTTGTTATCATCAATGAACCTACGATGACATCTCATTATTACCCAAAGTCCATAGTTTATATTAGGATTCATTCTTGGTGTTGCACATCCTATGAGTTTTGACAAACATGTAATGACATTTATCCACCATTGTAGTATTGCACAGAATAGTTTTATTGTCCTAAAACTACACTGTGCTCTGCCTACTCATTTATCCCTCCCTTCTAGCCCCGGCAACACTAATTTTCTTACTGATTCCATAATATTGCCTTTTCCAGAATGCCATACTGTTGCAATAATACACTATGAAGCTTTTTCAGATTGGTCTCTTTCACTTAGTTATATGCATTTAAATTTCCTGCAAGTCTTTTCATGGTTTGCTAGCCCTTTTCTTTTTAGCGTTGAATAAAATTTCATTGTCTGTATGTACCACAGTTTATTTATCCATTCACCTGCTGAAGAACATCTTGGTAATGTCCAAGTTTTAGCAATTATGAATAAAGCTACTATAAACATCCATTTGCAGGTTTTTGCATTCACATATAGTTTTGATTCATTTGGGTAAATACCAAGGAGCATGACTGCTGGATTGTATGGTAAAAGTATATTTAGTTTTGTAAGAAACTGTCAAACTGACTTCCAAAGTGGCCCTACTATTCTGAATTCCCACCAGCAATGAATAAGAGGTCCTGTTGCTCTACATATTTATTTGCCAGCATTTGGTGTTGTCAGTGTTCTGGATTTTGGCCATCCTAATGAGTGTGTAGGGGTATTTTATCTTAATTTGCATTCTCTAGTGGCATATAATGTGCAGCATCTTTTCACGTGCTTATTTGCCATCTGTATATCTTTTTTTGCCGAGGTGTCTTCAGGATTTTGCCCATATTTTAATCAGGTTGTTTCCTTATTGTTAAGTTTTAAAAGTAATTTGTATATTTTGGATAACTGTCTGTTATCAGATGTGTCTTTTGCAAATATTTTCTCTCATTCTGCAGCTTGACTTCTCATTCTCTTGACATTGTCTCTTGCAGAACATAAGTTCGTCATTTTAATGAAGTTCAGCTTATCAATTATTTCTTTCATGGGTCGTGCTTTTGGTCTCAAAAGTCATTGTCATACCCAAGATCATCCAGGTTTTCTCCTGTGTTACCTTCTAAGAGTTTTACAGTTTTGTGTCCGACATTTAGGCCTATGATACATTTTGAGCTAATTTTTGTGAAAGGTGTCTAGATTTCTTTTTTTGAATATGTGTGTCTCGTTGTTCCAGTAACATTTGCTGAAAAGACTATCTTTGCTTCATCGTGTTGCCTCTGCTCCTTTATCAAACATCACATATATGTGGTCTATTTCTAGGTTCTTTTTTTGAATTTTAATTTTTTAAATTATACTTTAAGTTCTGGGGTACAAGTGCAGAATGTGCAAGTTTGTTACATACGTATACAGGTGCCATGGTGGTTTGCTGCACCCATCAACGTGTCGCCTACATAAGGTATTTCTCCTAATGCTATCCCTCCCCTATCCTCTTCCACCCTGCATCAGGCCCTGATGCGTGATGTTCCCCCTTGCTGTGTCCATGTGTTCTCATTGTTCAGCTCCTACTTATGAGTGAGAACACGTGGTGTTTGGTTTTCTGTTCTTGTGTTAGTTTGCTGAGAATGATTGTTTCCAGCTTAATACATGTCCCTGCAAAGGACATAAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTTATCCAGTCTATCATTGATGAGAATTTGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCACAATAAACATATGTGTGCATGTGTCTTTATAGTAGAATGATTTACAATCCTTTGGGTATATACCCAGTAATAGGATTGCTGGGTCAAATGGTATTTCTAGTTCTAAATCCTCGAGGAATCGCCACACTCTCTTCCACAATGGTTGAACTAATTTACACTCCCACCAACAGTGTAAAAGCCTTCCTATTTCTCCACATCCTCTCCAATATCTGTTGTTTCCTGACTTTATAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGACCAGTGATGATGAACATTTTTTCATTTGTTTGTTGGCCGCATAAATGTCTTCTTTTGAGAAGTGTCTGATCATATTCTTTGCCACTTTTTGATGGGGTTGATTTTTTCTTATAAATTTGTTTAAGTTCTTTGTAGATTCTGGATATTAGCCCTTTGTCAGATGGGTAGATTGCAAAAATTTTCTCCCATTCTGTAGGTTGTCTGTTCACTCTGATGATAGTTTCTTTTGCTGTGCAGAAGCTCTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGGCATTGCTTTTGGTGTTTTAGTTATGAAGTCTTTGCCCATGCCTATGTACTGAAGGATATTGCCTAGGTTTTCTTCTAGGGTTGGTATGATTTTAGATCTTATGTTTAAGTCTTTAATCCATCTTGAGTTAATTTTTATATAAGGTATAAGAAAGGGGTCCAGTTTCAGTTTTCTGCATATGGCTAGCCAGTTTTCCCAACACCATTTATTAAGTAGGGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTGAAAGATCAGATGGTTGTAGATGTGTGGTGTTATTTCTGAGGCCTCTGTTCTGTTCCTTTGGTCTATATATCTGTTTTGGTACCAGTATCATGCTATTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAACATGATGCCTCCAGCTTTGTTCTTCTTGCCTAGGATTGTCTTGGCTATGCGGGCTCTTTTTTGGTTCCATATAAAGTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCAATGATAGCTTGATGGAGATAGCATTGAATCTATAAATTACTTTGGGCAGTATGGCCATTTTCACAATATTCATTCTTCCTATCCATGAGCATGGAATGTTTTTCCATTTGTTTGTGTCCTCTCTTATTTCCTTGAACAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAATTGTATTCCTAGGTATTTTATTCTCTTTGTAGCAATTGTGAATGGGTGTTCACTCATGATTTGACTCTCTGTCACTGGTGTATAGGAATGCTTGTGATTTCTGCACATTGATTTTGTATCTTGAGACTTTGCTTAAGTTGTTTATCAGCTTAAGGACATTTTGGGCTGAGACAATGGGGTTTTCTAAATATACAATCATGTCATCTGCAAACAGAGACAATTTGACTTCTTCTCTTCCTATATGAATACCCTTTATTGCCTTCTCTTGCCTGATTGCCTTAGCCAGAACTTCCAATACTATGCTGAATAGGAATGGTGAGAGAAGGCATCCATGTCTTCTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGTTGTGGGTTTGTCATAAATAGCTCTAATTATTTTGAGATATGTTCCATCAATATCTAGTTTATGGAGAGTTTTTAGCATGAAGGGCTGCTGAATTTTTTTGAAGGCCTTTTCTGTATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGTTCTGTTTATGTGATGGATTACGTTTACTGATTTGTGTACACTGAACCAGCCTTGCATCCCAGGGATGAAGCCGACTTGATGGTGGTGGATAAGCTTTTTGATGTGTTGCTGGATTCGGCTTGCCAACATTTTATTGAGGATTTTTGCATCGATTTTCATCAGGGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16618:HG4_PB_SVrefine2PBcRDovetail_1254:HG2_Ill_SVrefine2DISCOVARplusDovetail_6985:HG2_10X_SVrefine210Xhap12_1824:HG3_Ill_SVrefine2DISCOVARDovetail_1731:HG4_PB_SVrefine2Falcon1Dovetail_1431:HG3_PB_SVrefine2Falcon1Dovetail_1481:HG2_PB_SVrefine2PB10Xhap12_1817;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1824:HG2_Ill_SVrefine2DISCOVARplusDovetail_6985;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00633117;ClusterMaxSizeDiff=0.00616883;ClusterMaxEditDist=0.0183442;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=6165;DistBack=24000;DistForward=2016;DistMin=2016;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=2:159188989-159188991;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2942.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:48:0|1:30:2:0:35:./.:22:0:0:2:0/1:39:20:0/1:219:396:.:5980:.
chr2	159191006	HG3_Ill_GATKHCSBGrefine_1573	T	TTTAAAAAATATTTATGCCATTGTATTTATTTAAACTCTTTATGAGTTTCACTGAAAATAATAGTC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_2958:HG3_PB_pbsv_2375:HG4_PB_pbsv_2402:HG2_PB_pbsv_2388:HG4_PB_assemblyticsfalcon_14053:HG3_PB_assemblyticsfalcon_14275:HG2_PB_PB10Xdip_16619:HG3_PB_HySA_3699:HG4_Ill_svaba_3001:HG4_Ill_manta_561:HG4_Ill_Krunchall_3392:HG4_Ill_GATKHC_3928:HG4_Ill_GATKHCSBGrefine_1622:HG4_Ill_250bpfermikitraw_3235:HG4_Ill_150bpfermikitraw_3109:HG3_PB_SVrefine2PBcRDovetail_1215:HG3_PB_SVrefine2Falcon1Dovetail_1482:HG3_Ill_svaba_3037:HG3_Ill_manta_513:HG3_Ill_Spiral_2552:HG3_Ill_Krunchall_3254:HG3_Ill_GATKHC_3989:HG3_Ill_GATKHCSBGrefine_1573:HG3_Ill_250bpfermikitraw_3179:HG3_Ill_150bpfermikitraw_3058:HG2_Ill_svaba_2931:HG2_Ill_manta_650:HG2_Ill_SpiralSDKrefine_9045:HG2_Ill_Krunchall_3231:HG2_Ill_GATKHC_3870:HG2_Ill_GATKHCSBGrefine_1557:HG2_Ill_250bpfermikitraw_3201;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2958:HG4_Ill_svaba_3001:HG4_Ill_manta_561:HG4_Ill_Krunchall_3392:HG4_Ill_GATKHC_3928:HG4_Ill_GATKHCSBGrefine_1622:HG4_Ill_250bpfermikitraw_3235:HG4_Ill_150bpfermikitraw_3109:HG3_PB_SVrefine2PBcRDovetail_1215:HG3_PB_SVrefine2Falcon1Dovetail_1482:HG3_Ill_svaba_3037:HG3_Ill_manta_513:HG3_Ill_Spiral_2552:HG3_Ill_Krunchall_3254:HG3_Ill_GATKHC_3989:HG3_Ill_GATKHCSBGrefine_1573:HG3_Ill_250bpfermikitraw_3179:HG3_Ill_150bpfermikitraw_3058:HG2_Ill_svaba_2931:HG2_Ill_manta_650:HG2_Ill_SpiralSDKrefine_9045:HG2_Ill_Krunchall_3231:HG2_Ill_GATKHC_3870:HG2_Ill_GATKHCSBGrefine_1557:HG2_Ill_250bpfermikitraw_3201;NumExactMatchSVs=25;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.123077;ClusterMaxEditDist=0.246154;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=13;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=65;DistBack=0;DistForward=40171;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:159191007-159191008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2943.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:32:0|1:22:7:0:23:0|1:26:0:1:40:0/1:24:32:./.:.:.:.:.:.
chr2	160094319	HG4_Ill_manta_563	C	CGTACCAAGGAAACCCCAAGAAAACCATACACACACAAAATACAAATAGTGCTGCAATGAATCTTTGCCTTTTACAAATAGTGCT	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_14261:HG2_PB_pbsv_2390:HG2_PB_PB10Xdip_16620:HG3_PB_assemblyticsfalcon_14279:HG3_PB_pbsv_2378:HG4_Ill_svaba_3009:HG4_PB_pbsv_2405:HG4_Ill_manta_563:HG4_Ill_Krunchall_3399:HG4_Ill_GATKHC_3936:HG4_Ill_GATKHCSBGrefine_1624:HG4_Ill_250bpfermikitraw_3241:HG4_Ill_150bpfermikitraw_3116:HG3_Ill_svaba_3041:HG3_Ill_Krunchall_3256:HG3_Ill_GATKHC_3993:HG3_Ill_GATKHCSBGrefine_1574:HG3_Ill_250bpfermikitraw_3181:HG2_Ill_svaba_2936:HG2_Ill_manta_652:HG2_Ill_Krunchall_3236:HG2_Ill_GATKHC_3875:HG2_Ill_GATKHCSBGrefine_1558:HG2_Ill_250bpfermikitraw_3204:HG2_Ill_150bpfermikitraw_2964:HG2_PB_HySA_4547;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2964:HG2_Ill_250bpfermikitraw_3204:HG2_Ill_GATKHCSBGrefine_1558:HG2_Ill_GATKHC_3875:HG2_Ill_Krunchall_3236:HG2_Ill_manta_652:HG2_Ill_svaba_2936:HG3_Ill_250bpfermikitraw_3181:HG3_Ill_GATKHCSBGrefine_1574:HG3_Ill_GATKHC_3993:HG3_Ill_Krunchall_3256:HG3_Ill_svaba_3041:HG4_Ill_150bpfermikitraw_3116:HG4_Ill_250bpfermikitraw_3241:HG4_Ill_GATKHCSBGrefine_1624:HG4_Ill_GATKHC_3936:HG4_Ill_Krunchall_3399:HG4_Ill_manta_563:HG4_Ill_svaba_3009;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0809249;ClusterMaxSizeDiff=0.0578035;ClusterMaxEditDist=0.312139;PBcalls=7;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=84;DistBack=3563;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=91;REFWIDENED=2:160094294-160094384;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2944.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:2:15:0:17:./.:1:14:2:11:./.:3:41:./.:.:.:.:.:.
chr2	160107622	HG2_PB_SVrefine2Falcon2Bionano_973	T	TAAAAATTAGCTGGGCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16621:HG3_PB_HySA_3706:HG4_PB_pbsv_2406:HG2_PB_HySA_4549:HG3_PB_pbsv_2380:HG2_PB_pbsv_2391:HG3_PB_SVrefine2Falcon1Dovetail_1484:HG3_PB_assemblyticsfalcon_14281:HG2_PB_assemblyticsfalcon_14263:HG4_PB_assemblyticsfalcon_14059:HG2_PB_SVrefine2PBcRplusDovetail_5943:HG4_Ill_SVrefine2DISCOVARDovetail_1777:HG4_PB_SVrefine2PBcRDovetail_1256:HG2_PB_SVrefine2Falcon2Bionano_973:HG2_PB_SVrefine2Falcon1plusDovetail_6417:HG4_Ill_GATKHCSBGrefine_1625:HG2_PB_SVrefine2PB10Xhap12_1819:HG2_Ill_SVrefine2DISCOVARplusDovetail_6991:HG4_PB_SVrefine2Falcon1Dovetail_1433:HG4_PB_HySA_3638;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6417:HG2_PB_SVrefine2Falcon2Bionano_973:HG4_PB_SVrefine2PBcRDovetail_1256;NumExactMatchSVs=3;ClusterMaxShiftDist=0.331325;ClusterMaxSizeDiff=0.331325;ClusterMaxEditDist=0.331325;PBcalls=17;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=164;DistBack=3232;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:160107623-160107638;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9939;PctRecOverlap=0.9879;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2945.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:1:35:1:14:./.:1:4:0:4:1/1:0:15:./.:.:.:.:.:.
chr2	160376320	HG4_Ill_GATKHCSBGrefine_1630	A	ACTACAGGCACCCGCCACCACGCCCGGCTAATTTCTTTTTGTCTTTTTAGTAGAGACGGAGCTTCACTGTGTTAGCCAGGATGGTCTCGACCTCCTGACCTCGTGATCCGCCCTCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGC	20	PASS	ClusterIDs=HG3_PB_HySA_3713:HG4_PB_pbsv_2412:HG2_PB_PB10Xdip_16623:HG2_PB_pbsv_2397:HG2_PB_HySA_4555:HG4_PB_SVrefine2Falcon1Dovetail_1437:HG4_Ill_GATKHCSBGrefine_1630:HG3_PB_SVrefine2PBcRDovetail_1220:HG3_PB_SVrefine2Falcon1Dovetail_1487:HG3_Ill_Spiral_2555:HG3_Ill_MetaSV_2804:HG3_Ill_GATKHCSBGrefine_1577:HG3_Ill_250bpfermikitraw_3185:HG3_Ill_150bpfermikitraw_3067:HG2_PB_SVrefine2PB10Xhap12_1824:HG2_Ill_GATKHCSBGrefine_1562:HG4_PB_assemblyticsfalcon_14063:HG3_PB_assemblyticsfalcon_14286:HG4_PB_HySA_3642:HG4_PB_SVrefine2PBcRDovetail_1260;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1562:HG2_PB_SVrefine2PB10Xhap12_1824:HG3_Ill_150bpfermikitraw_3067:HG3_Ill_250bpfermikitraw_3185:HG3_Ill_GATKHCSBGrefine_1577:HG3_Ill_MetaSV_2804:HG3_Ill_Spiral_2555:HG3_PB_SVrefine2Falcon1Dovetail_1487:HG3_PB_SVrefine2PBcRDovetail_1220:HG4_Ill_GATKHCSBGrefine_1630:HG4_PB_SVrefine2Falcon1Dovetail_1437;NumExactMatchSVs=11;ClusterMaxShiftDist=0.243243;ClusterMaxSizeDiff=0.243243;ClusterMaxEditDist=0.278912;PBcalls=13;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=9;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=159;DistBack=-1;DistForward=31656;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:160376321-160376322;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2946.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:26:0|1:29:0:3:22:1|0:1:11:17:0:0/1:23:12:./.:.:.:.:.:.
chr2	160562428	HG2_PB_SVrefine2Falcon2Bionano_978	C	CAAACCAAAAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_978:HG3_PB_pbsv_2386:HG2_PB_pbsv_2398:HG3_PB_HySA_3714:HG2_Ill_breakscan11_3224;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_978;NumExactMatchSVs=1;ClusterMaxShiftDist=0.128743;ClusterMaxSizeDiff=0.125749;ClusterMaxEditDist=0.189928;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=9566;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=2:160562429-160562439;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.988;PctRecOverlap=0.982;SizeDiff=-4;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=2947.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:32:0|1:32:6:1:20:1|0:0:6:40:0:0/1:24:14:0/1:8:24:.:.:.
chr2	161952316	HG3_Ill_SVrefine2DISCOVARDovetail_1748	T	TAAAAAAAAAAAAAAAAAAGGCCTGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAAATCACAAGGTCAGGAGTTCGAGACCAGCCTGGTCAACATAGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGCGGGCGCCTGTAATCCTAACTACTTGGGAGGTTGAGGCAGGAGAATTGCTTGAACCCAGGAGACAGAGGTTGCAGCAAGCCGAGATTGCACCACTGGATACCAGTCCAGGCAACAATGTGAGACTGTCTCAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3226:HG3_PB_pbsv_2393:HG2_PB_PB10Xdip_16656:HG4_PB_assemblyticsfalcon_14077:HG3_PB_assemblyticsfalcon_14302:HG2_PB_assemblyticsPBcR_13875:HG2_PB_HySA_4573:HG2_PB_pbsv_2409:HG4_PB_pbsv_2420:HG4_PB_SVrefine2Falcon1Dovetail_1445:HG3_PB_SVrefine2Falcon1Dovetail_1495:HG2_PB_SVrefine2Falcon1plusDovetail_6427:HG3_PB_SVrefine2PBcRDovetail_1224:HG4_Ill_SVrefine2DISCOVARDovetail_1787:HG4_Ill_MetaSV_2761:HG4_Ill_GATKHCSBGrefine_1639:HG3_Ill_SVrefine2DISCOVARDovetail_1748:HG3_Ill_MetaSV_2807:HG3_Ill_GATKHCSBGrefine_1585:HG2_PB_SVrefine2PBcRplusDovetail_5955:HG2_PB_SVrefine2PB10Xhap12_1836:HG2_PB_SVrefine2Falcon2Bionano_984:HG2_Ill_SVrefine2DISCOVARplusDovetail_7003:HG2_Ill_MetaSV_2667:HG2_Ill_GATKHCSBGrefine_1568:HG2_10X_SVrefine210Xhap12_1836:HG4_PB_SVrefine2PBcRDovetail_1268:HG3_PB_HySA_3735:HG4_PB_HySA_3653;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1836:HG2_Ill_GATKHCSBGrefine_1568:HG2_Ill_MetaSV_2667:HG2_Ill_SVrefine2DISCOVARplusDovetail_7003:HG2_PB_SVrefine2Falcon2Bionano_984:HG2_PB_SVrefine2PB10Xhap12_1836:HG2_PB_SVrefine2PBcRplusDovetail_5955:HG3_Ill_GATKHCSBGrefine_1585:HG3_Ill_MetaSV_2807:HG3_Ill_SVrefine2DISCOVARDovetail_1748:HG4_Ill_GATKHCSBGrefine_1639:HG4_Ill_MetaSV_2761:HG4_Ill_SVrefine2DISCOVARDovetail_1787;NumExactMatchSVs=13;ClusterMaxShiftDist=0.181208;ClusterMaxSizeDiff=0.181208;ClusterMaxEditDist=0.228188;PBcalls=18;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=300;DistBack=26124;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=2:161952317-161952337;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2948.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:85:./.:0:1:0:2:./.:0:8:0:4:./.:0:7:1/1:2:47:.:.:.
chr2	162923547	HG3_Ill_manta_520	C	CACTTGACATGCAGTAAGCATTCAATAGCCATATCCCCCCACTCCCATATCTTCAGTAAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1840:HG4_PB_HySA_3657:HG4_PB_pbsv_2423:HG2_PB_PB10Xdip_16658:HG2_PB_pbsv_2412:HG4_Ill_svaba_3019:HG4_Ill_manta_568:HG4_Ill_Krunchall_3425:HG4_Ill_GATKHC_3963:HG4_Ill_GATKHCSBGrefine_1642:HG4_Ill_Cortex_1923:HG4_Ill_250bpfermikitraw_3264:HG4_Ill_150bpfermikitraw_3139:HG3_Ill_svaba_3055:HG3_Ill_manta_520:HG3_Ill_Spiral_2568:HG3_Ill_Krunchall_3279:HG3_Ill_GATKHC_4018:HG3_Ill_GATKHCSBGrefine_1588:HG3_Ill_Cortex_1970:HG3_Ill_250bpfermikitraw_3200:HG3_Ill_150bpfermikitraw_3082:HG2_Ill_svaba_2948:HG2_Ill_manta_660:HG2_Ill_SpiralSDKrefine_9063:HG2_Ill_Krunchall_3256:HG2_Ill_GATKHC_3900:HG2_Ill_GATKHCSBGrefine_1571:HG2_Ill_Cortex_4556:HG2_Ill_250bpfermikitraw_3222:HG2_Ill_150bpfermikitraw_2981:HG2_PB_HySA_4580:HG2_Ill_breakscan11_3227:HG4_PB_SVrefine2PBcRDovetail_1270:HG4_Ill_SVrefine2DISCOVARDovetail_1792:HG3_Ill_SVrefine2DISCOVARDovetail_1753:HG2_PB_SVrefine2PBcRplusDovetail_5959:HG2_PB_SVrefine2PB10Xhap12_1839:HG2_PB_SVrefine2Falcon2Bionano_987:HG2_PB_SVrefine2Falcon1plusDovetail_6430:HG2_Ill_SVrefine2DISCOVARplusDovetail_7009;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2981:HG2_Ill_250bpfermikitraw_3222:HG2_Ill_Cortex_4556:HG2_Ill_GATKHCSBGrefine_1571:HG2_Ill_GATKHC_3900:HG2_Ill_Krunchall_3256:HG2_Ill_SpiralSDKrefine_9063:HG2_Ill_manta_660:HG2_Ill_svaba_2948:HG3_Ill_150bpfermikitraw_3082:HG3_Ill_250bpfermikitraw_3200:HG3_Ill_Cortex_1970:HG3_Ill_GATKHCSBGrefine_1588:HG3_Ill_GATKHC_4018:HG3_Ill_Krunchall_3279:HG3_Ill_Spiral_2568:HG3_Ill_manta_520:HG3_Ill_svaba_3055:HG4_Ill_150bpfermikitraw_3139:HG4_Ill_250bpfermikitraw_3264:HG4_Ill_Cortex_1923:HG4_Ill_GATKHCSBGrefine_1642:HG4_Ill_GATKHC_3963:HG4_Ill_Krunchall_3425:HG4_Ill_manta_568:HG4_Ill_svaba_3019;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0826446;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.241935;PBcalls=10;Illcalls=30;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=59;DistBack=-26;DistForward=21773;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=2:162923531-162923573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2949.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:78:1/1:1:40:1:26:./.:1:31:2:30:1/1:0:50:./.:.:.:.:.:.
chr2	163678617	HG4_Ill_GATKHCSBGrefine_1644	A	AAAATTTTACTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1500:HG4_PB_pbsv_2427:HG2_PB_pbsv_2415:HG4_PB_assemblyticsfalcon_14086:HG3_PB_assemblyticsfalcon_14311:HG4_PB_HySA_3659:HG2_PB_SVrefine2Falcon2Bionano_990:HG4_PB_SVrefine2Falcon1Dovetail_1450:HG4_PB_SVrefine2PBcRDovetail_1273:HG4_Ill_MetaSV_2764:HG4_Ill_GATKHCSBGrefine_1644:HG2_Ill_MetaSV_2670:HG2_Ill_GATKHCSBGrefine_1573;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1573:HG2_Ill_MetaSV_2670:HG4_Ill_GATKHCSBGrefine_1644:HG4_Ill_MetaSV_2764:HG4_PB_SVrefine2PBcRDovetail_1273;NumExactMatchSVs=5;ClusterMaxShiftDist=0.141707;ClusterMaxSizeDiff=0.141707;ClusterMaxEditDist=0.190016;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=311;DistBack=11891;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:163678618-163678631;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2950.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:42:0|1:31:2:0:30:./.:1:2:31:0:0/1:38:9:0/1:5:30:.:.:.
chr2	166787242	HG2_PB_SVrefine2Falcon2Bionano_993	G	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAATATATGTATGGGGGTGT	20	PASS	ClusterIDs=HG3_PB_HySA_3754:HG2_PB_HySA_4601:HG2_PB_SVrefine2Falcon2Bionano_993:HG3_Ill_GATKHC_4044:HG3_PB_pbsv_2403:HG2_PB_assemblyticsPBcR_13898:HG2_PB_pbsv_2418:HG4_PB_HySA_3683;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_993;NumExactMatchSVs=1;ClusterMaxShiftDist=0.291139;ClusterMaxSizeDiff=0.278481;ClusterMaxEditDist=0.316456;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=87;DistBack=-1;DistForward=21634;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=2:166787235-166787276;PctSeqSimilarity=0.9944;PctSizeSimilarity=0.9885;PctRecOverlap=0.9885;SizeDiff=1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=2951.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:49:0|1:30:8:4:37:./.:19:6:1:23:0/1:22:8:./.:.:.:.:.:.
chr2	167169518	HG4_Ill_GATKHC_3996	T	TTAAATAATATAGTTATTTAATTTTCTGAATTAAATAATATAGTTATTTAATTTTCTG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16688:HG2_PB_pbsv_2424:HG4_Ill_svaba_3042:HG3_PB_pbsv_2409:HG4_Ill_Krunchall_3450:HG4_Ill_GATKHC_3996:HG4_Ill_GATKHCSBGrefine_1659:HG4_Ill_250bpfermikitraw_3288:HG4_Ill_150bpfermikitraw_3169:HG3_Ill_svaba_3079:HG3_Ill_Spiral_2593:HG3_Ill_Krunchall_3309:HG3_Ill_GATKHC_4056:HG3_Ill_GATKHCSBGrefine_1599:HG3_Ill_250bpfermikitraw_3225:HG3_Ill_150bpfermikitraw_3110:HG2_Ill_svaba_2970:HG2_Ill_SpiralSDKrefine_9083:HG2_Ill_Krunchall_3293:HG2_Ill_GATKHC_3938:HG2_Ill_GATKHCSBGrefine_1585:HG2_Ill_250bpfermikitraw_3246:HG2_Ill_150bpfermikitraw_3010:HG4_PB_HySA_3691:HG3_PB_HySA_3762:HG2_PB_HySA_4608;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3010:HG2_Ill_250bpfermikitraw_3246:HG2_Ill_GATKHCSBGrefine_1585:HG2_Ill_GATKHC_3938:HG2_Ill_Krunchall_3293:HG2_Ill_SpiralSDKrefine_9083:HG2_Ill_svaba_2970:HG3_Ill_150bpfermikitraw_3110:HG3_Ill_250bpfermikitraw_3225:HG3_Ill_GATKHCSBGrefine_1599:HG3_Ill_GATKHC_4056:HG3_Ill_Krunchall_3309:HG3_Ill_Spiral_2593:HG3_Ill_svaba_3079:HG4_Ill_150bpfermikitraw_3169:HG4_Ill_250bpfermikitraw_3288:HG4_Ill_GATKHCSBGrefine_1659:HG4_Ill_GATKHC_3996:HG4_Ill_Krunchall_3450:HG4_Ill_svaba_3042;NumExactMatchSVs=20;ClusterMaxShiftDist=0.102564;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.231405;PBcalls=6;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=18;DistForward=149;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=186;REFWIDENED=2:167169472-167169631;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2952.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:0:12:2:13:./.:0:18:2:20:1/1:0:60:./.:.:.:.:.:.
chr2	167746388	HG4_PB_SVrefine2Falcon1Dovetail_1459	T	TCTTCTTCCATGGCCTTCTGCTTCTCAGCCTGGAGCTGTGTGTCGACCTCCTAAGGGCTGCTTTACTTCCTGGCCTGGCTTTTGTGGCCTCCCGTTTCCCTCCTCTTAGGCATTGCAGCTCTGGTGACTGCAGCAGCACCACCTGGATCTAACCTAATGTATCATTTCCCCAAGAGACTACAACAGTTGCCTTATCCTGAGCAGCTTTGTGACATCCACCAGGGATTGTAGATTGTCAGTCTTCATTATCCAAATCAGTGTCCCAAAATAGGACCCAGAATGTTTGACGTCACCCTCAGGCCAGGGTCCTGAACATGTAAAGGTAAAGAAGTGGAAGTTTAGCAAAGCCAGACTGTTTCATACTTTCTACTATTGCCATTACACTTAGAGAATAAACTGGGACATATATATGTTTTTTTTCTTTTTAAAAAACTGTATTAGTCCACTTTTACACTGCTGTAAAGAATACTTGAGACTGGGAAATTTTATAAAGAAAGAGGTAATTGATGCACAATTACACATGGCTGGGAGGCTAAGAAACTTACAATCATGGCAGAAGGTGAAGGGGAAACAAGGCACATCTTACATGGTGGCAGGCGAGAGCAAGAGCACAGGGGGAACTGCACTCTAAAACCACCAGATCTCATGAGAACTCACTCACTCAGCAGGAGAACAGCATGAAGGAAGCCCACCCCAGTGATCCAATCACCTCCCACCAGGTCCTCCCTGACACATGGGAATTACAATGTGAGATGAGATTTGACTGGGGACACAGAGCCAAACCATATCAGAGGCAGTCTCACCCTGTTCCCAGTCTGGAGTGCAGTGGCAGGATAATAGCTCACTGCAGCCTCAAACTCCTGGACTCAAGGGTTTTTCCTGTCTCTCCCTCCCATGTAACTGGGACTACAGGTACACAATACCATGTTCAGCTATTTTTTTAAATTTTTTTGTAGAGATGGGTCTTGCTGTGCTGCCCAGGCTTGTATGGAAAACCTGGCCTCAAGCAGTCCTCCTGCCTTGACCTCCCAAAGCACTGGGATTATAGGCATGAGCCCCTATACCCAAAACTATTTTAACCTGAAACACCATAAATGACCACCTGATTTATATATGTGTAAAGAAACTAAGACCCTGAGAGAACAAGGGAACTGACCTTAGTATCAAGAACACGTTTCCACTCTGGACAGCTGGCCCTCATCTGAGCATTTCTGGAGTTTTCAAAGAGCATAAAATGAACCATTTTATTCCATTTTAATGGTCTTAGGCTAACTCTATTCTGAAAATCAAATCTACCCTTAATAGATAATTTGTCTGCATAAATATTTAAAATTCAATTTGTAAATTTAAAAATGAATTTACAACCTTACAGGAAAATTTTAAATATGTTTTGATTAGTATTACCATAGTGTTCAATTAGTGTATTTCAAAAGAAACCCACAAGTCTCTATTGAACCATTTCTAGTACTGCATAAATAAATTATTCTGATATTTTGCAACACTTTTCAAAGTTCATGTATTCCCTCTAATTCCAGGTCAGGAAAGGCATTATGAGTCCCATTTTATCCTGAGGGAAAACAAAGCTCAAGAACCATATGGTGCTAAATAGAAAATCTTCAACAAACAGTCTTGGTGTGGTAAGCCCTGCTTCTGTAGTTTTTGCTGCTACACTATAAGATGCACATCCATATTTTCACATCATCCAACTGCACCCCTCTCAGTCTCAATGTCATGTATTTATTGAATAAGGATGTAATTTTAATTTTATTTTTGTTGTTATTGTTGTTCATTGCTCAAAGAAAAATCTTATAAATGGTTTTCTCATTACTGAGAAAATTTTAGCAATATCTGATTCTATCTACTGTCATGTCTCAGATGAGCTGATATTTGTGTTATATAACAAATTGCCAACTTGCAATTTCCCTTTAATTTGTGTGTGTTGGAGGATGGAGAGGAGAGGCACCAGAGGTTGGATCCCTTTGCATTCAACATGCACAAAAATTATCTTCATTAGGAAGCCTATTTTATTTTATCATAACAGACATTTACCAGTGTACGTTCTACACGTCCTGATCACCGTTTTCATGATTTTTAATGACATGTTTTGTCAGTTGTTTTCTTGTGGTAAATATAAATAACATGGAATTTACAATTTTAAACATATTTAAGTATACACTTTCCCCAACTTACTGGTTTGATTGAATGACTTTTCAACTTTATGATGGTGTAAAAGTGACATGCATTTAGTAGAAACTGTACTTCAAATTTGAATTTGTACCCATACAACCATTCTGTGTTACACTTTCAGTAGAGTATTCAATAAATTACATGATGTATTCTACACTGCATTTTAAGATAGGCTTAGCTGATTTTGCCTTCTGTAGGCTAATGTAAGTATACTGAACACGTTTAAGGTGGCTAGGCTAAACTGTAATGATCTGTGGGCGAGGCATATTAAATGCATTTTTAATTTATGATATTTTCAATTTACAATGGGTTTATTAGTACAGAGTCTCATAAATTGAGGAGCGTCTGTGTACCACTCAGGGACATTAAGTACTTTCACACTGGTACAGTCATCACCACAATCCATCTCCAGAACTCTTTCAGCCTCCCAAACTGAAACTATGTACTCATTAATAAAAAAATAATTCCCATTTCTCTCTCCTCTCAGTCCCCAGTAACCACTATTTGACATTCTGTCTTCATGAATTTGACTATTCTATGTACCACGTAGTAGTGGGATCACATAATATTTTATTATTTGTAACTGACTTCAGTTAATATATCTTTAAGTTTCATCCACATTGCATTATATGCCAAAATTTCCTCTTTTTAAGGCTAAATATTCCATTGTATAATATACACCACGTTTTGTTTTATCCATTTGCTATACAGGGGCATTTGGGTTGTTTCCAATTTTTGCTATTGTGAATAATGTTGCTGTGGACATTGCTGTGCTAGTATTTGTTTGAGTTTCTACTTTCAAAGCTTTTAGCTACATATCTATACATAGAAATTGCTGGGTCATAAGGTAGTTGTATGTTGCATTTTTTAAGAAACCACCATAGTGTCTTCAGAAAAGCTGCATCATTTACATTGCCTACAGCAATGCACAGTGGTTCAAATTTCTACACACCCTTGTCAACATTTGTGATTTTCTGTTGTATATGTTGTTTTATGAAGGCTTCATGAGTACTTAGCACAGCAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16696:HG4_PB_SVrefine2Falcon1Dovetail_1459:HG2_PB_SVrefine2Falcon1plusDovetail_6442:HG2_10X_SVrefine210Xhap12_1854:HG4_PB_SVrefine2PBcRDovetail_1280:HG3_PB_SVrefine2Falcon1Dovetail_1510:HG2_PB_SVrefine2PB10Xhap12_1845:HG4_PB_HySA_3701:HG4_PB_pbsv_2445;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_1459;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0437209;ClusterMaxSizeDiff=0.0434109;ClusterMaxEditDist=0.11907;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=3210;DistBack=30487;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=2:167746389-167746397;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.996;PctRecOverlap=0.9963;SizeDiff=-13;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2953.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:32:0|1:33:1:0:23:1|0:0:9:29:0:0/1:19:14:0/1:103:187:.:3210:.
chr2	169144310	HG2_PB_SVrefine2Falcon1plusDovetail_6445	G	GAAAATAAAAGCAACAGAACACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_4623:HG3_PB_pbsv_2418:HG3_PB_assemblyticsfalcon_14345:HG3_PB_HySA_3775:HG4_PB_SVrefine2Falcon1Dovetail_1463:HG3_PB_SVrefine2Falcon1Dovetail_1512:HG2_PB_pbsv_2433:HG3_PB_SVrefine2PBcRDovetail_1239:HG2_PB_SVrefine2Falcon1plusDovetail_6445;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6445:HG3_PB_SVrefine2PBcRDovetail_1239;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0509338;ClusterMaxSizeDiff=0.0509338;ClusterMaxEditDist=0.180301;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=290;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=2:169144311-169144328;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9966;PctRecOverlap=0.9828;SizeDiff=-1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=2955.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:48:0|1:26:1:0:37:./.:22:0:1:7:0/1:30:9:./.:.:.:.:.:.
chr2	171905140	HG2_Ill_Krunchall_3346	C	CTCTCTAATATCACAAGGACATTATTGTGATATCACAATAATCACACAATAATCAAACAAGAGTTTGATATCT	20	PASS	ClusterIDs=HG2_PB_pbsv_2452:HG3_PB_pbsv_2437:HG4_Ill_svaba_3100:HG4_Ill_Krunchall_3507:HG4_Ill_250bpfermikitraw_3333:HG4_Ill_150bpfermikitraw_3214:HG3_Ill_svaba_3128:HG3_Ill_Krunchall_3359:HG3_Ill_250bpfermikitraw_3273:HG3_Ill_150bpfermikitraw_3157:HG2_Ill_svaba_3012:HG2_Ill_Krunchall_3346:HG2_Ill_250bpfermikitraw_3299:HG2_Ill_150bpfermikitraw_3052:HG4_Ill_manta_585:HG4_Ill_Cortex_1938:HG3_Ill_manta_537:HG3_Ill_Spiral_2635:HG3_Ill_Cortex_1987:HG2_Ill_manta_675:HG2_Ill_SpiralSDKrefine_9117:HG2_Ill_Cortex_4584;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3052:HG2_Ill_250bpfermikitraw_3299:HG2_Ill_Krunchall_3346:HG2_Ill_svaba_3012:HG3_Ill_150bpfermikitraw_3157:HG3_Ill_250bpfermikitraw_3273:HG3_Ill_Krunchall_3359:HG3_Ill_svaba_3128:HG4_Ill_150bpfermikitraw_3214:HG4_Ill_250bpfermikitraw_3333:HG4_Ill_Krunchall_3507:HG4_Ill_svaba_3100;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0675676;ClusterMaxSizeDiff=0.027027;ClusterMaxEditDist=0.187919;PBcalls=2;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:171905139-171905141;PctSeqSimilarity=0.9864;PctSizeSimilarity=0.9861;PctRecOverlap=0.9726;SizeDiff=1;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=2956.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:40:0|1:29:9:1:25:0|1:28:0:0:64:0/1:39:35:./.:.:.:.:.:.
chr2	172392024	HG3_Ill_250bpfermikitraw_3276	G	GAAAGAGTAAGAAGTCTTCACTGGGAACACGGTTGTCTTTGAATTTTTGGCTTTATTTATTTATTTTTGAGACAGA	20	PASS	ClusterIDs=HG2_PB_HySA_4666:HG2_PB_pbsv_2453:HG4_PB_HySA_3735:HG4_PB_pbsv_2469:HG4_PB_SVrefine2PBcRDovetail_1293:HG3_PB_pbsv_2438:HG4_Ill_SVrefine2DISCOVARDovetail_1829:HG3_PB_SVrefine2PBcRDovetail_1251:HG3_PB_HySA_3817:HG3_Ill_SVrefine2DISCOVARDovetail_1796:HG3_Ill_250bpfermikitraw_3276:HG2_PB_SVrefine2Falcon1plusDovetail_6458;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6458:HG3_Ill_250bpfermikitraw_3276:HG3_Ill_SVrefine2DISCOVARDovetail_1796:HG3_PB_HySA_3817:HG3_PB_SVrefine2PBcRDovetail_1251:HG4_Ill_SVrefine2DISCOVARDovetail_1829:HG4_PB_SVrefine2PBcRDovetail_1293;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0779221;ClusterMaxSizeDiff=0.0519481;ClusterMaxEditDist=0.305732;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=75;DistBack=43048;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=150;REFWIDENED=2:172392025-172392174;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2957.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:32:0|1:14:2:0:25:./.:7:0:4:4:0/1:31:20:./.:.:.:.:.:.
chr2	172723109	HG2_PB_SVrefine2Falcon1plusDovetail_6461	A	ACCTCCCTCCCGGACGGGGCGGCTGGCCGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGCGGCTGGCCGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGAGGGGCGGCTGGCCGGGGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCGGACGGGGCGGCTGGCCGGCCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCC	10	PASS	ClusterIDs=HG4_PB_pbsv_2470:HG2_PB_HySA_4668:HG2_PB_SVrefine2Falcon1plusDovetail_6461:HG4_PB_SVrefine2PBcRDovetail_1295:HG3_PB_SVrefine2Falcon1Dovetail_1522:HG2_PB_SVrefine2PBcRplusDovetail_5985:HG2_PB_SVrefine2Falcon2Bionano_1009:HG3_PB_SVrefine2PBcRDovetail_1252:HG4_PB_SVrefine2Falcon1Dovetail_1472;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6461;NumExactMatchSVs=1;ClusterMaxShiftDist=0.170274;ClusterMaxSizeDiff=0.170274;ClusterMaxEditDist=0.244477;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=358;DistBack=33;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=75;REFWIDENED=2:172723110-172723184;PctSeqSimilarity=0.971;PctSizeSimilarity=0.9471;PctRecOverlap=0.9024;SizeDiff=-20;StartDistance=-27;EndDistance=-27;GTMatch=1;TruScore=94;MatchId=2958.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:51:1/1:1:14:1:16:./.:4:1:1:0:0/1:12:5:0/1:4:12:.:.:.
chr2	173663363	HG3_Ill_GATKHC_4141	T	TTGGAGGCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3229:HG2_PB_HySA_4684:HG4_PB_HySA_3743:HG4_PB_pbsv_2475:HG3_PB_pbsv_2448:HG3_PB_SVrefine2PBcRDovetail_1257:HG4_PB_SVrefine2Falcon1Dovetail_1476:HG2_PB_pbsv_2463:HG4_PB_SVrefine2PBcRDovetail_1298:HG4_Ill_SVrefine2DISCOVARDovetail_1835:HG4_Ill_GATKHC_4076:HG4_Ill_GATKHCSBGrefine_1705:HG3_Ill_GATKHC_4141:HG2_PB_SVrefine2Falcon2Bionano_1012:HG2_Ill_SVrefine2DISCOVARplusDovetail_7056:HG2_Ill_GATKHC_4021:HG2_Ill_GATKHCSBGrefine_1617:HG3_PB_SVrefine2Falcon1Dovetail_1527;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1617:HG2_Ill_GATKHC_4021:HG2_Ill_SVrefine2DISCOVARplusDovetail_7056:HG2_PB_SVrefine2Falcon2Bionano_1012:HG3_Ill_GATKHC_4141:HG4_Ill_GATKHCSBGrefine_1705:HG4_Ill_GATKHC_4076:HG4_Ill_SVrefine2DISCOVARDovetail_1835:HG4_PB_SVrefine2PBcRDovetail_1298;NumExactMatchSVs=9;ClusterMaxShiftDist=0.225;ClusterMaxSizeDiff=0.225;ClusterMaxEditDist=0.35;PBcalls=10;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=83;DistBack=44;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=2:173663364-173663376;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2960.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:40:1|0:1:38:24:0:1|0:0:14:23:0:0/1:37:8:./.:.:.:.:.:.
chr2	175735932	HG2_10X_SVrefine210Xhap12_1880	T	TAAAGAGGAGCATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_4705:HG2_PB_pbsv_2469:HG4_PB_pbsv_2481:HG3_PB_pbsv_2458:HG2_PB_assemblyticsfalcon_14395:HG2_PB_SVrefine2Falcon1plusDovetail_6469:HG2_PB_assemblyticsPBcR_14002:HG2_PB_HySA_4706:HG3_Ill_MetaSV_2828:HG4_PB_SVrefine2PBcRDovetail_1302:HG3_PB_SVrefine2Falcon1Dovetail_1531:HG2_PB_SVrefine2PBcRplusDovetail_6003:HG4_PB_SVrefine2Falcon1Dovetail_1481:HG2_PB_SVrefine2Falcon2Bionano_1016:HG4_Ill_GATKHCSBGrefine_1712:HG2_Ill_MetaSV_2684:HG2_Ill_GATKHCSBGrefine_1623:HG2_10X_SVrefine210Xhap12_1880:HG4_Ill_MetaSV_2781:HG4_PB_HySA_3758;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1880:HG2_Ill_GATKHCSBGrefine_1623:HG2_Ill_MetaSV_2684:HG4_Ill_GATKHCSBGrefine_1712;NumExactMatchSVs=4;ClusterMaxShiftDist=0.118211;ClusterMaxSizeDiff=0.118211;ClusterMaxEditDist=0.216478;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=308;DistBack=102988;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=2:175735933-175735945;PctSeqSimilarity=0.9794;PctSizeSimilarity=0.9595;PctRecOverlap=0.9626;SizeDiff=-13;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=2961.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:96:./.:0:2:0:1:1/1:0:15:0:13:1/1:0:15:1/1:1:60:.:.:.
chr2	176728298	HG2_PB_SVrefine2Falcon2Bionano_1019	AAAG	GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATAGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGATCCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCTGTCAAGCTCTTTTCAGGTGAGGATTT	20	PASS	ClusterIDs=HG2_PB_pbsv_2472:HG3_Ill_GATKHCSBGrefine_1640:HG2_Ill_GATKHCSBGrefine_1627:HG2_PB_assemblyticsfalcon_14401:HG2_PB_SVrefine2PB10Xhap12_1866:HG2_PB_SVrefine2Falcon2Bionano_1019:HG2_PB_SVrefine2Falcon1plusDovetail_6472:HG3_PB_SVrefine2Falcon1Dovetail_1534:HG2_PB_assemblyticsPBcR_14011:HG2_PB_SVrefine2PBcRplusDovetail_6006:HG3_Ill_MetaSV_2829:HG2_Ill_MetaSV_2685:HG3_PB_pbsv_2463:HG2_PB_HySA_4713;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6472:HG2_PB_SVrefine2Falcon2Bionano_1019:HG2_PB_assemblyticsfalcon_14401;NumExactMatchSVs=3;ClusterMaxShiftDist=0.248649;ClusterMaxSizeDiff=0.245045;ClusterMaxEditDist=0.266667;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=291;DistBack=0;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:176728302-176728297;PctSeqSimilarity=1;PctSizeSimilarity=0.9898;PctRecOverlap=0.9932;SizeDiff=-3;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2962.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:57:0|1:22:0:0:45:./.:14:0:1:11:0/1:26:11:./.:.:.:.:.:.
chr2	178318418	HG2_PB_SVrefine2Falcon2Bionano_1024	A	TTTTTTTTTTTTTTTTTTTTTTTGGAGACAGAGTCTTACTCTGTCGCTCAGCAGGCTGGAGTGCAGTGGTTCACCACAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTACCTCAGCCTCCCAAGTAGCTGGGATTACAAGCTTGAGCCACCATGCCCGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGATCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACTGTGCCCAGCCCCCTCTGGCTACTTTTTTTTTTTTTTTTTTTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6476:HG2_PB_HySA_4723:HG2_PB_pbsv_2476:HG4_PB_pbsv_2486:HG3_PB_pbsv_2467:HG2_PB_PB10Xdip_16726:HG3_PB_HySA_3872:HG4_PB_HySA_3773:HG2_Ill_breakscan11_3231:HG3_PB_SVrefine2PBcRDovetail_1271:HG3_PB_SVrefine2Falcon1Dovetail_1538:HG2_PB_SVrefine2PB10Xhap12_1869:HG2_PB_SVrefine2Falcon2Bionano_1024:HG2_PB_SVrefine2PBcRplusDovetail_6012:HG4_PB_SVrefine2PBcRDovetail_1307:HG4_PB_SVrefine2Falcon1Dovetail_1486;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1024:HG2_PB_SVrefine2PB10Xhap12_1869;NumExactMatchSVs=2;ClusterMaxShiftDist=0.104956;ClusterMaxSizeDiff=0.0991254;ClusterMaxEditDist=0.305233;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=330;DistBack=2716;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=312;REFWIDENED=2:178318419-178318730;PctSeqSimilarity=0.9509;PctSizeSimilarity=0.9677;PctRecOverlap=0.1202;SizeDiff=-11;StartDistance=-295;EndDistance=-295;GTMatch=0;TruScore=67;MatchId=2963.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:5:52:1/1:4:38:0:9:./.:1:6:0:2:./.:3:1:0/1:7:8:.:.:.
chr2	178351454	HG2_PB_SVrefine2PB10Xhap12_1870	G	GCTATATGTATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCTCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3232:HG4_PB_pbsv_2487:HG2_PB_HySA_4724:HG3_PB_HySA_3873:HG2_PB_PB10Xdip_16727:HG3_PB_pbsv_2468:HG2_PB_pbsv_2477:HG2_PB_assemblyticsfalcon_14411:HG2_PB_assemblyticsPBcR_14023:HG2_PB_SVrefine2Falcon1plusDovetail_6477:HG4_Ill_SVrefine2DISCOVARDovetail_1851:HG3_Ill_GATKHCSBGrefine_1646:HG4_PB_SVrefine2PBcRDovetail_1308:HG4_Ill_GATKHCSBGrefine_1717:HG2_PB_SVrefine2PBcRplusDovetail_6013:HG2_PB_SVrefine2PB10Xhap12_1870:HG2_PB_SVrefine2Falcon2Bionano_1025:HG4_PB_SVrefine2Falcon1Dovetail_1487:HG3_PB_SVrefine2Falcon1Dovetail_1539:HG3_PB_SVrefine2PBcRDovetail_1272:HG2_10X_SVrefine210Xhap12_1888:HG4_PB_HySA_3774;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1870:HG2_PB_SVrefine2PBcRplusDovetail_6013:HG4_Ill_GATKHCSBGrefine_1717;NumExactMatchSVs=3;ClusterMaxShiftDist=0.217143;ClusterMaxSizeDiff=0.217143;ClusterMaxEditDist=0.25072;PBcalls=17;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=343;DistBack=32628;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=2:178351455-178351466;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2964.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:75:1/1:0:8:2:26:./.:0:0:0:4:1/1:0:24:1/1:4:76:.:.:.
chr2	179037070	HG2_Ill_MetaSV_2689	C	CGTTTCTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGATTCG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16730:HG2_PB_HySA_4728:HG4_PB_pbsv_2491:HG2_Ill_breakscan11_3233:HG3_PB_pbsv_2476:HG4_PB_HySA_3779:HG2_PB_pbsv_2482:HG4_Ill_MetaSV_2784:HG3_Ill_MetaSV_2834:HG2_Ill_MetaSV_2689:HG2_PB_assemblyticsfalcon_14417:HG2_PB_assemblyticsPBcR_14030:HG2_PB_SVrefine2PBcRplusDovetail_6016:HG4_PB_SVrefine2PBcRDovetail_1312:HG3_PB_SVrefine2Falcon1Dovetail_1545:HG4_PB_SVrefine2Falcon1Dovetail_1492:HG2_PB_SVrefine2Falcon1plusDovetail_6480:HG2_PB_SVrefine2Falcon2Bionano_1028:HG2_PB_SVrefine2PB10Xhap12_1873;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_MetaSV_2689:HG3_Ill_MetaSV_2834;NumExactMatchSVs=2;ClusterMaxShiftDist=0.219313;ClusterMaxSizeDiff=0.219313;ClusterMaxEditDist=0.286656;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=-11;DistForward=22;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:179037066-179037081;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9841;SizeDiff=1;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=99;MatchId=2965.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:48:0|1:33:2:0:39:./.:1:3:22:0:0/1:34:9:0/1:9:49:.:.:.
chr2	179621867	HG2_Ill_SVrefine2DISCOVARplusDovetail_7078	C	CACTGTATGCTTTAAGTACAGTAAGTAATACTGTACTTGCTTTAAGTACAGTAAGTAATACTGTACTTGCTTTAAGTACAGTAAGTAACACTGTACTTGCTTTAAGTACAGTAAGTAATACTGTACTTGCTTTAAGTACAGTAAGTAATACTGTACTTGCTTTAAGTACAGTAAGTAATACTGTACTTGCTTTAAGTACAGTAAGTAATACTGTACTTGCTTTAAGTACAGTAAGTAAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1275:HG2_PB_SVrefine2PB10Xhap12_1874:HG4_PB_pbsv_2493:HG2_PB_pbsv_2484:HG4_PB_HySA_3782:HG2_PB_HySA_4732:HG2_PB_PB10Xdip_16731:HG3_PB_HySA_3885:HG2_Ill_MetaSV_2691:HG3_PB_pbsv_2478:HG3_Ill_SVrefine2DISCOVARDovetail_1822:HG4_PB_SVrefine2PBcRDovetail_1313:HG4_PB_SVrefine2Falcon1Dovetail_1493:HG4_Ill_SVrefine2DISCOVARDovetail_1856:HG3_PB_SVrefine2Falcon1Dovetail_1546:HG2_PB_SVrefine2PBcRplusDovetail_6017:HG2_PB_SVrefine2Falcon2Bionano_1030:HG2_PB_SVrefine2Falcon1plusDovetail_6482:HG2_Ill_SVrefine2DISCOVARplusDovetail_7078;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7078:HG2_PB_SVrefine2Falcon1plusDovetail_6482:HG2_PB_SVrefine2Falcon2Bionano_1030:HG2_PB_SVrefine2PBcRplusDovetail_6017:HG3_PB_SVrefine2Falcon1Dovetail_1546:HG4_Ill_SVrefine2DISCOVARDovetail_1856:HG4_PB_SVrefine2Falcon1Dovetail_1493:HG4_PB_SVrefine2PBcRDovetail_1313;NumExactMatchSVs=8;ClusterMaxShiftDist=0.251046;ClusterMaxSizeDiff=0.251046;ClusterMaxEditDist=0.251046;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=238;DistBack=10052;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=89;REFWIDENED=2:179621868-179621956;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9917;PctRecOverlap=0.971;SizeDiff=-2;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=98;MatchId=2966.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:124:1/1:0:19:2:16:1/1:0:9:0:7:1/1:1:34:./.:.:.:.:.:.
chr2	181000555	HG2_PB_SVrefine2Falcon1plusDovetail_6484	C	CAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGAGTTCACCCATGATTTGGCTCTTTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAAAAAAAACAAAAACCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAGAAAATATAGGTCTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1876:HG2_PB_SVrefine2PBcRplusDovetail_6019:HG2_PB_HySA_4745:HG3_PB_pbsv_2482:HG3_PB_SVrefine2Falcon1Dovetail_1549:HG2_PB_pbsv_2490:HG2_PB_assemblyticsfalcon_14432:HG2_PB_SVrefine2Falcon1plusDovetail_6484:HG2_Ill_breakscan11_3235:HG2_PB_PB10Xdip_16734;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6484:HG2_PB_assemblyticsfalcon_14432;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0464182;ClusterMaxSizeDiff=0.0459719;ClusterMaxEditDist=0.226164;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=2216;DistBack=22;DistForward=12472;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:181000556-181000555;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9964;PctRecOverlap=0.9964;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2967.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:42:0|1:25:0:0:29:./.:32:0:2:12:0/1:33:13:0/1:82:277:.:.:.
chr2	181546925	HG4_Ill_GATKHC_4135	A	ATGTATGTGTAATAAATACACAGGCATACTGTATGTGTAATAAATACACAGGCATAC	20	PASS	ClusterIDs=HG4_PB_HySA_3791:HG3_PB_HySA_3899:HG2_PB_HySA_4747:HG2_PB_PB10Xdip_16735:HG3_PB_pbsv_2483:HG4_PB_SVrefine2PBcRDovetail_1317:HG4_PB_SVrefine2Falcon1Dovetail_1496:HG4_Ill_SVrefine2DISCOVARDovetail_1861:HG4_Ill_Krunchall_3577:HG4_Ill_GATKHC_4135:HG4_Ill_GATKHCSBGrefine_1725:HG4_Ill_250bpfermikitraw_3399:HG4_Ill_150bpfermikitraw_3278:HG3_PB_SVrefine2PBcRDovetail_1277:HG3_PB_SVrefine2Falcon1Dovetail_1550:HG3_Ill_SVrefine2DISCOVARDovetail_1828:HG3_Ill_Krunchall_3444:HG3_Ill_GATKHC_4205:HG3_Ill_GATKHCSBGrefine_1656:HG3_Ill_250bpfermikitraw_3348:HG2_PB_SVrefine2PBcRplusDovetail_6020:HG2_PB_SVrefine2Falcon2Bionano_1032:HG2_PB_SVrefine2Falcon1plusDovetail_6485:HG2_Ill_SVrefine2DISCOVARplusDovetail_7083:HG2_Ill_Krunchall_3421:HG2_Ill_GATKHC_4078:HG2_Ill_GATKHCSBGrefine_1639:HG2_Ill_250bpfermikitraw_3369;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3369:HG2_Ill_GATKHCSBGrefine_1639:HG2_Ill_GATKHC_4078:HG2_Ill_Krunchall_3421:HG2_Ill_SVrefine2DISCOVARplusDovetail_7083:HG2_PB_SVrefine2Falcon1plusDovetail_6485:HG2_PB_SVrefine2Falcon2Bionano_1032:HG2_PB_SVrefine2PBcRplusDovetail_6020:HG3_Ill_250bpfermikitraw_3348:HG3_Ill_GATKHCSBGrefine_1656:HG3_Ill_GATKHC_4205:HG3_Ill_Krunchall_3444:HG3_Ill_SVrefine2DISCOVARDovetail_1828:HG3_PB_SVrefine2Falcon1Dovetail_1550:HG3_PB_SVrefine2PBcRDovetail_1277:HG4_Ill_150bpfermikitraw_3278:HG4_Ill_250bpfermikitraw_3399:HG4_Ill_GATKHCSBGrefine_1725:HG4_Ill_GATKHC_4135:HG4_Ill_Krunchall_3577:HG4_Ill_SVrefine2DISCOVARDovetail_1861:HG4_PB_SVrefine2Falcon1Dovetail_1496:HG4_PB_SVrefine2PBcRDovetail_1317;NumExactMatchSVs=23;ClusterMaxShiftDist=0.134454;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.229508;PBcalls=12;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=94;REFWIDENED=2:181546926-181547019;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2968.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:1/1:0:16:2:19:./.:3:19:4:22:0/1:5:45:./.:.:.:.:.:.
chr2	181738260	HG2_PB_assemblyticsPBcR_14047	C	CGGCCGGCCGGGGTGGGGGACGAGCGCCGGGTTCCGTCCAAGCCCTGTTGAAGCAG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3127:HG4_PB_pbsv_2502:HG2_PB_HySA_4751:HG3_PB_pbsv_2485:HG4_Ill_svaba_3154:HG4_Ill_Krunchall_3580:HG4_Ill_GATKHCSBGrefine_1726:HG4_Ill_250bpfermikitraw_3402:HG4_Ill_150bpfermikitraw_3281:HG3_Ill_svaba_3187:HG3_Ill_Spiral_2693:HG3_Ill_Krunchall_3447:HG3_Ill_GATKHCSBGrefine_1658:HG3_Ill_250bpfermikitraw_3350:HG3_Ill_150bpfermikitraw_3232:HG2_PB_assemblyticsfalcon_14437:HG2_PB_assemblyticsPBcR_14047:HG2_Ill_svaba_3068:HG2_Ill_manta_691:HG2_Ill_SpiralSDKrefine_9171:HG2_Ill_Krunchall_3424:HG2_Ill_GATKHCSBGrefine_1641:HG2_Ill_250bpfermikitraw_3372;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3127:HG4_Ill_svaba_3154:HG4_Ill_Krunchall_3580:HG4_Ill_GATKHCSBGrefine_1726:HG4_Ill_250bpfermikitraw_3402:HG4_Ill_150bpfermikitraw_3281:HG3_Ill_svaba_3187:HG3_Ill_Spiral_2693:HG3_Ill_Krunchall_3447:HG3_Ill_GATKHCSBGrefine_1658:HG3_Ill_250bpfermikitraw_3350:HG3_Ill_150bpfermikitraw_3232:HG2_PB_assemblyticsfalcon_14437:HG2_PB_assemblyticsPBcR_14047:HG2_Ill_svaba_3068:HG2_Ill_manta_691:HG2_Ill_SpiralSDKrefine_9171:HG2_Ill_Krunchall_3424:HG2_Ill_GATKHCSBGrefine_1641:HG2_Ill_250bpfermikitraw_3372;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.105263;PBcalls=5;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=55;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=2:181738259-181738262;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2969.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:68:./.:0:0:0:0:./.:1:5:1:4:1/1:0:30:./.:.:.:.:.:.
chr2	182153306	HG2_PB_SVrefine2Falcon2Bionano_1035	A	AATATAAATATTAATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTTATATAAATATTATATTTATATTATTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6488:HG2_PB_PB10Xdip_16738:HG2_PB_SVrefine2PB10Xhap12_1879:HG2_PB_SVrefine2PBcRplusDovetail_6023:HG2_PB_SVrefine2Falcon2Bionano_1035;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1035:HG2_PB_SVrefine2PBcRplusDovetail_6023;NumExactMatchSVs=2;ClusterMaxShiftDist=0.17737;ClusterMaxSizeDiff=0.17737;ClusterMaxEditDist=0.17737;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=337;DistBack=12763;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=639;REFWIDENED=2:182153307-182153945;PctSeqSimilarity=0.9629;PctSizeSimilarity=0.9258;PctRecOverlap=0.9233;SizeDiff=-27;StartDistance=-12;EndDistance=-12;GTMatch=1;TruScore=93;MatchId=2970.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:10:97:1/1:1:19:2:19:./.:0:0:0:0:./.:0:0:./.:3:6:.:.:.
chr2	182239351	HG2_Ill_SVrefine2DISCOVARplusDovetail_7086	G	ATATATATGTGTATATATATATATATATGTATATATATATATGTATATATATATATGTGTATATATATATATGTATATATATATATACACATATATATGTATATATATATGTGTATATATATATATGTATATATATATATATATA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2696:HG2_PB_SVrefine2PBcRplusDovetail_6024:HG2_Ill_GATKHCSBGrefine_1644:HG2_PB_SVrefine2Falcon2Bionano_1036:HG2_PB_assemblyticsPBcR_14054:HG2_PB_SVrefine2Falcon1plusDovetail_6489:HG2_PB_assemblyticsfalcon_14445:HG2_Ill_SVrefine2DISCOVARplusDovetail_7086:HG2_PB_pbsv_2497:HG4_PB_pbsv_2506:HG4_PB_HySA_3796:HG2_PB_HySA_4757:HG3_Ill_MetaSV_2840:HG2_PB_PB10Xdip_16740;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7086;NumExactMatchSVs=1;ClusterMaxShiftDist=0.26616;ClusterMaxSizeDiff=0.26616;ClusterMaxEditDist=0.27668;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=144;DistBack=17;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:182239352-182239350;PctSeqSimilarity=0.9783;PctSizeSimilarity=0.9792;PctRecOverlap=0.8621;SizeDiff=3;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=93;MatchId=2971.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:./.:0:2:0:2:./.:0:0:0:4:1/1:1:11:./.:.:.:.:.:.
chr2	183762243	HG2_Ill_SVrefine2DISCOVARplusDovetail_7096	T	TTTTTCCCCATAACTCTCATCACCTTCTACATAATTCGTGTATGTATTTTATTGTCTACTTTCTTCCCCTTTTCCCCATAACTCTCATCACCTTCTACATAATTCGTGTATGTATTTTATTGTCTACTTTCTTCCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1886:HG4_PB_pbsv_2515:HG4_PB_HySA_3804:HG2_PB_PB10Xdip_16746:HG4_Ill_SVrefine2DISCOVARDovetail_1873:HG2_PB_SVrefine2Falcon2Bionano_1042:HG2_Ill_SVrefine2DISCOVARplusDovetail_7096:HG2_PB_HySA_4769:HG2_PB_SVrefine2Falcon1plusDovetail_6495:HG2_PB_pbsv_2505;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7096:HG2_PB_SVrefine2Falcon2Bionano_1042:HG4_Ill_SVrefine2DISCOVARDovetail_1873;NumExactMatchSVs=3;ClusterMaxShiftDist=0.14652;ClusterMaxSizeDiff=0.139194;ClusterMaxEditDist=0.175182;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=136;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=2:183762244-183762312;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2973.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:0|1:33:0:1:28:1|0:1:43:10:0:0/1:17:19:./.:.:.:.:.:.
chr2	184288964	HG2_Ill_MetaSV_2703	A	ATGTTAAGAATTATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6498:HG2_PB_assemblyticsfalcon_14462:HG2_PB_pbsv_2508:HG3_PB_HySA_3919:HG3_PB_pbsv_2501:HG4_PB_SVrefine2Falcon1Dovetail_1509:HG2_PB_SVrefine2Falcon2Bionano_1045:HG2_Ill_MetaSV_2703:HG2_Ill_GATKHCSBGrefine_1650:HG2_10X_SVrefine210Xhap12_1910:HG3_PB_SVrefine2PBcRDovetail_1287:HG3_PB_SVrefine2Falcon1Dovetail_1563;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1910:HG2_Ill_GATKHCSBGrefine_1650:HG2_Ill_MetaSV_2703:HG2_PB_SVrefine2Falcon2Bionano_1045;NumExactMatchSVs=4;ClusterMaxShiftDist=0.107595;ClusterMaxSizeDiff=0.107595;ClusterMaxEditDist=0.241221;PBcalls=9;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=313;DistBack=23261;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:184288965-184288978;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2974.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:29:./.:26:3:6:17:0|1:36:0:1:10:0/1:30:9:./.:3:27:.:.:.
chr2	185312915	HG2_PB_SVrefine2Falcon2Bionano_1046	G	GTATATATATATTTTATATATATAAAAATATATTTATATATTTATATATATAAAAATATATTTATATATTTATATATATAAAAATATATTTATATATTTATATATATAAAAATATATTTATATATTTATATATATAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_2511:HG2_PB_SVrefine2Falcon1plusDovetail_6500:HG3_PB_pbsv_2506:HG3_PB_SVrefine2PBcRDovetail_1289:HG3_Ill_SVrefine2DISCOVARDovetail_1850:HG2_PB_SVrefine2Falcon2Bionano_1046;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1046:HG3_Ill_SVrefine2DISCOVARDovetail_1850;NumExactMatchSVs=2;ClusterMaxShiftDist=0.113208;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.246269;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=139;DistBack=31002;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=163;REFWIDENED=2:185312916-185313078;PctSeqSimilarity=0.9637;PctSizeSimilarity=0.9137;PctRecOverlap=0.2374;SizeDiff=12;StartDistance=-100;EndDistance=-100;GTMatch=0;TruScore=70;MatchId=2975.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:./.:24:11:6:11:./.:1:2:0:5:0/1:7:22:./.:.:.:.:.:.
chr2	187102460	HG3_Ill_GATKHC_4260	T	TATATATATTATATATAAGGAGAATATATATATTTTATATATATAATTATATATA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7116:HG4_Ill_Krunchall_3633:HG2_PB_HySA_4797:HG4_Ill_GATKHC_4183:HG4_Ill_250bpfermikitraw_3437:HG3_Ill_Spiral_2727:HG3_Ill_GATKHC_4260:HG3_Ill_250bpfermikitraw_3389:HG2_Ill_GATKHC_4128:HG2_Ill_250bpfermikitraw_3410:HG4_PB_pbsv_2526:HG4_Ill_SVrefine2DISCOVARDovetail_1886:HG2_PB_SVrefine2Falcon2Bionano_1047;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3410:HG2_Ill_GATKHC_4128:HG3_Ill_250bpfermikitraw_3389:HG3_Ill_GATKHC_4260:HG3_Ill_Spiral_2727:HG4_Ill_250bpfermikitraw_3437:HG4_Ill_GATKHC_4183:HG4_Ill_Krunchall_3633;NumExactMatchSVs=8;ClusterMaxShiftDist=0.190476;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.380952;PBcalls=3;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=25;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=190;REFWIDENED=2:187102402-187102591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2976.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:0|1:26:8:1:14:./.:18:1:0:15:0/1:19:25:./.:.:.:.:.:.
chr2	187470457	HG2_PB_SVrefine2Falcon1plusDovetail_6504	T	TTGTAGATGTGTATATATATATATATATTTATATGTATAATACATATATTCTTATGTATATGTATAATATATTCTTATGTATATGTATAATACATATATTCTTATGTATATGTATAATACATATATTCTTATGTATATGTATAATACATATATTCTTATGTATATGTATAATACATATATTCTTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6504:HG3_PB_HySA_3944:HG2_PB_HySA_4799:HG4_PB_pbsv_2530:HG4_PB_SVrefine2Falcon1Dovetail_1513:HG3_PB_pbsv_2511:HG3_PB_SVrefine2PBcRDovetail_1292:HG3_PB_SVrefine2Falcon1Dovetail_1567:HG2_PB_SVrefine2PBcRplusDovetail_6034:HG2_PB_SVrefine2Falcon2Bionano_1049;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6504:HG4_PB_SVrefine2Falcon1Dovetail_1513:HG3_PB_SVrefine2PBcRDovetail_1292:HG3_PB_SVrefine2Falcon1Dovetail_1567:HG2_PB_SVrefine2PBcRplusDovetail_6034:HG2_PB_SVrefine2Falcon2Bionano_1049;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0899471;ClusterMaxSizeDiff=0.0846561;ClusterMaxEditDist=0.296296;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=184;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=172;REFWIDENED=2:187470458-187470629;PctSeqSimilarity=0.9725;PctSizeSimilarity=0.9735;PctRecOverlap=0.6349;SizeDiff=-5;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=86;MatchId=2977.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:73:./.:0:0:0:0:./.:0:22:2:26:1/1:2:47:./.:.:.:.:.:.
chr2	187663836	HG2_Ill_GATKHC_4130	A	ATATATATAATAATATATATATAATTATTATATATATTATTATATATAATAAATATATATAATTATATATATATTTATTATATATAATAATATATAATTATTATATATATTATATATAATATATAATAATTATATTTAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1568:HG3_PB_pbsv_2512:HG2_PB_pbsv_2519:HG2_Ill_breakscan11_3236:HG3_Ill_MetaSV_2848:HG3_Ill_GATKHC_4263:HG3_Ill_GATKHCSBGrefine_1681:HG4_Ill_manta_610:HG4_Ill_GATKHC_4185:HG4_Ill_GATKHCSBGrefine_1747:HG2_Ill_manta_702:HG2_Ill_MetaSV_2705:HG2_Ill_GATKHC_4130:HG2_Ill_GATKHCSBGrefine_1661:HG3_Ill_manta_564:HG2_PB_PB10Xdip_16757:HG3_PB_SVrefine2PBcRDovetail_1293:HG3_Ill_SVrefine2DISCOVARDovetail_1865:HG4_Ill_SVrefine2DISCOVARDovetail_1890:HG2_PB_SVrefine2Falcon1plusDovetail_6505:HG2_PB_SVrefine2PBcRplusDovetail_6035:HG2_PB_SVrefine2PB10Xhap12_1891:HG2_PB_SVrefine2Falcon2Bionano_1050:HG2_Ill_SVrefine2DISCOVARplusDovetail_7120;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1661:HG2_Ill_GATKHC_4130:HG2_Ill_MetaSV_2705:HG2_Ill_manta_702:HG4_Ill_GATKHCSBGrefine_1747:HG4_Ill_GATKHC_4185:HG4_Ill_manta_610;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0569395;ClusterMaxSizeDiff=0.0498221;ClusterMaxEditDist=0.190141;PBcalls=9;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=138;DistBack=-1;DistForward=37;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=130;REFWIDENED=2:187663829-187663958;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9928;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2978.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:65:1/1:2:16:1:14:./.:0:5:0:1:1/1:0:27:./.:.:.:.:.:.
chr2	187824235	HG2_PB_SVrefine2Falcon2Bionano_1051	T	TTGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCC	20	PASS	ClusterIDs=HG2_PB_pbsv_2520:HG2_PB_assemblyticsfalcon_14490:HG3_PB_pbsv_2513:HG2_PB_SVrefine2Falcon1plusDovetail_6507:HG2_PB_HySA_4803:HG2_PB_SVrefine2PB10Xhap12_1892:HG2_PB_SVrefine2Falcon2Bionano_1051:HG2_PB_SVrefine2Falcon1plusDovetail_6506:HG2_PB_PB10Xdip_16758:HG2_PB_HySA_4802:HG3_PB_HySA_3947:HG2_Ill_breakscan11_3237;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1051:HG2_PB_SVrefine2PB10Xhap12_1892;NumExactMatchSVs=2;ClusterMaxShiftDist=0.119632;ClusterMaxSizeDiff=0.119632;ClusterMaxEditDist=0.213018;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=-8;DistForward=-1;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=2:187824236-187824248;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2979.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:34:./.:6:13:3:8:./.:22:0:0:4:0/1:25:6:0/1:12:20:.:.:.
chr2	189575833	HG4_PB_SVrefine2PBcRDovetail_1334	A	AGAACATAAATTGTGAAGATTTCATGGACATTTATTAGTTCCCCAAATTAATACTTTTATAATTTCTTATGCCTGTCTTTACTGCAATCTCT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_3429:HG2_PB_pbsv_2529:HG4_PB_HySA_3843:HG4_PB_pbsv_2540:HG2_PB_HySA_4818:HG2_10X_SVrefine210Xhap12_1924:HG2_PB_PB10Xdip_16763:HG4_PB_SVrefine2PBcRDovetail_1334:HG4_Ill_SVrefine2DISCOVARDovetail_1897:HG4_Ill_Krunchall_3647:HG4_Ill_250bpfermikitraw_3452:HG3_Ill_SVrefine2DISCOVARDovetail_1873:HG3_Ill_250bpfermikitraw_3409:HG2_PB_SVrefine2PBcRplusDovetail_6042:HG2_PB_SVrefine2PB10Xhap12_1898:HG2_PB_SVrefine2Falcon2Bionano_1053:HG2_PB_SVrefine2Falcon1plusDovetail_6513:HG2_Ill_SVrefine2DISCOVARplusDovetail_7128;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3429:HG4_PB_SVrefine2PBcRDovetail_1334:HG4_Ill_SVrefine2DISCOVARDovetail_1897:HG4_Ill_Krunchall_3647:HG4_Ill_250bpfermikitraw_3452:HG3_Ill_SVrefine2DISCOVARDovetail_1873:HG3_Ill_250bpfermikitraw_3409:HG2_PB_SVrefine2PBcRplusDovetail_6042:HG2_PB_SVrefine2PB10Xhap12_1898:HG2_PB_SVrefine2Falcon2Bionano_1053:HG2_PB_SVrefine2Falcon1plusDovetail_6513:HG2_Ill_SVrefine2DISCOVARplusDovetail_7128;NumExactMatchSVs=12;ClusterMaxShiftDist=0.11399;ClusterMaxSizeDiff=0.11399;ClusterMaxEditDist=0.235897;PBcalls=10;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=91;DistBack=35761;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=171;REFWIDENED=2:189575834-189576004;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2980.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:50:1/1:4:25:2:10:./.:3:3:7:6:1/1:3:53:./.:.:.:.:.:.
chr2	190706549	HG4_Ill_Krunchall_3659	A	AATTTTATTACTCAGTTTCCTTAGCTTGGTTCACTGAAAACCTTTTTTCAGTGAACCAAGCTAATGAAACTGAGTAATAAAATTCTGCT	20	PASS	ClusterIDs=HG4_PB_HySA_3854:HG2_PB_PB10Xdip_16765:HG3_PB_pbsv_2528:HG4_PB_pbsv_2548:HG2_PB_SVrefine2Falcon1plusDovetail_6517:HG2_PB_assemblyticsfalcon_14515:HG2_PB_HySA_4831:HG2_PB_pbsv_2534:HG4_PB_assemblyticsfalcon_14286:HG2_PB_assemblyticsPBcR_14114:HG2_Ill_breakscan11_3239:HG4_PB_SVrefine2PBcRDovetail_1337:HG4_PB_SVrefine2Falcon1Dovetail_1523:HG4_Ill_manta_616:HG4_Ill_SVrefine2DISCOVARDovetail_1903:HG4_Ill_Krunchall_3659:HG4_Ill_GATKHC_4208:HG4_Ill_GATKHCSBGrefine_1759:HG4_Ill_250bpfermikitraw_3460:HG4_Ill_150bpfermikitraw_3340:HG3_PB_SVrefine2Falcon1Dovetail_1576:HG2_PB_SVrefine2PBcRplusDovetail_6046:HG2_PB_SVrefine2PB10Xhap12_1902:HG2_PB_SVrefine2Falcon2Bionano_1057:HG2_Ill_manta_710:HG2_Ill_SpiralSDKrefine_9216:HG2_Ill_SVrefine2DISCOVARplusDovetail_7134:HG2_Ill_Krunchall_3500:HG2_Ill_GATKHC_4154:HG2_Ill_GATKHCSBGrefine_1674:HG2_Ill_250bpfermikitraw_3439:HG2_Ill_150bpfermikitraw_3193:HG2_10X_SVrefine210Xhap12_1929:HG4_Ill_svaba_3206:HG3_PB_SVrefine2PBcRDovetail_1302:HG3_Ill_svaba_3239:HG3_Ill_manta_570:HG3_Ill_Spiral_2746:HG3_Ill_SVrefine2DISCOVARDovetail_1878:HG3_Ill_Krunchall_3530:HG3_Ill_GATKHC_4294:HG3_Ill_GATKHCSBGrefine_1696:HG3_Ill_250bpfermikitraw_3420:HG2_Ill_svaba_3118;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1929:HG2_Ill_150bpfermikitraw_3193:HG2_Ill_250bpfermikitraw_3439:HG2_Ill_GATKHCSBGrefine_1674:HG2_Ill_GATKHC_4154:HG2_Ill_Krunchall_3500:HG2_Ill_SVrefine2DISCOVARplusDovetail_7134:HG2_Ill_SpiralSDKrefine_9216:HG2_Ill_manta_710:HG2_PB_SVrefine2Falcon2Bionano_1057:HG2_PB_SVrefine2PB10Xhap12_1902:HG2_PB_SVrefine2PBcRplusDovetail_6046:HG3_PB_SVrefine2Falcon1Dovetail_1576:HG4_Ill_150bpfermikitraw_3340:HG4_Ill_250bpfermikitraw_3460:HG4_Ill_GATKHCSBGrefine_1759:HG4_Ill_GATKHC_4208:HG4_Ill_Krunchall_3659:HG4_Ill_SVrefine2DISCOVARDovetail_1903:HG4_Ill_manta_616:HG4_PB_SVrefine2Falcon1Dovetail_1523:HG4_PB_SVrefine2PBcRDovetail_1337;NumExactMatchSVs=22;ClusterMaxShiftDist=0.262295;ClusterMaxSizeDiff=0.262295;ClusterMaxEditDist=0.273224;PBcalls=17;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=88;DistBack=0;DistForward=18976;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=2:190706550-190706556;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2981.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:./.:0:3:0:2:1/1:0:17:0:19:1/1:0:43:./.:.:.:.:.:.
chr2	191002598	HG2_Ill_250bpfermikitraw_3440	C	CTAAGGCAGTACTAAATATTTTGCTTTTTAGTGATTATTTGGATTATTTGGATTCCAGTTGTAAGGTACAGTTTTTCTTAGCAACTCT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7137:HG3_Ill_SVrefine2DISCOVARDovetail_1880:HG3_Ill_Krunchall_3533:HG3_Ill_GATKHCSBGrefine_1698:HG3_Ill_250bpfermikitraw_3422:HG2_PB_assemblyticsfalcon_14516:HG2_PB_SVrefine2Falcon1plusDovetail_6518:HG2_Ill_Krunchall_3503:HG2_Ill_GATKHCSBGrefine_1675:HG2_Ill_250bpfermikitraw_3441:HG2_10X_SVrefine210Xhap12_1931:HG2_PB_SVrefine2Falcon1plusDovetail_6519:HG3_PB_pbsv_2529:HG2_PB_PB10Xdip_16766:HG4_PB_pbsv_2549:HG4_PB_SVrefine2PBcRDovetail_1338:HG2_PB_pbsv_2535:HG4_Ill_manta_617:HG4_Ill_Krunchall_3662:HG4_Ill_GATKHC_4211:HG4_Ill_GATKHCSBGrefine_1760:HG3_Ill_Krunchall_3532:HG3_Ill_GATKHCSBGrefine_1697:HG3_Ill_250bpfermikitraw_3421:HG2_PB_SVrefine2Falcon2Bionano_1058:HG2_Ill_manta_711:HG2_Ill_Krunchall_3502:HG2_Ill_250bpfermikitraw_3440:HG2_PB_assemblyticsPBcR_14115:HG4_PB_HySA_3856:HG2_PB_HySA_4832:HG2_PB_SVrefine2PB10Xhap12_1903;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3440:HG2_Ill_Krunchall_3502:HG2_Ill_manta_711:HG2_PB_SVrefine2Falcon2Bionano_1058:HG3_Ill_250bpfermikitraw_3421:HG3_Ill_GATKHCSBGrefine_1697:HG3_Ill_Krunchall_3532:HG4_Ill_GATKHCSBGrefine_1760:HG4_Ill_GATKHC_4211:HG4_Ill_Krunchall_3662:HG4_Ill_manta_617:HG4_PB_SVrefine2PBcRDovetail_1338;NumExactMatchSVs=12;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.0674157;ClusterMaxEditDist=0.266667;PBcalls=13;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=87;DistBack=8;DistForward=34;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=86;REFWIDENED=2:191002548-191002633;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2982.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:1:23:0:16:./.:6:31:4:32:1/1:1:57:./.:.:.:.:.:.
chr2	192840044	HG4_PB_HySA_3871	T	TTTTTATTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGATGACCATCCTGGCTAACAAGGTGAAACCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGAGCTGAGCAGGAGATGGCTTGAACCCAGAGGCGGAGCTTGCAGTGAGCCGAGATTTCCGCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGAA	20	PASS	ClusterIDs=HG2_PB_HySA_4861:HG3_PB_pbsv_2543:HG4_PB_pbsv_2560:HG2_PB_pbsv_2549:HG4_PB_HySA_3871:HG4_PB_assemblyticsfalcon_14312:HG2_PB_assemblyticsPBcR_14134:HG2_PB_assemblyticsfalcon_14534:HG2_Ill_breakscan11_3240:HG3_PB_SVrefine2Falcon1Dovetail_1586:HG4_PB_SVrefine2Falcon1Dovetail_1532:HG2_PB_SVrefine2PBcRplusDovetail_6058:HG2_PB_SVrefine2Falcon1plusDovetail_6531:HG2_PB_SVrefine2Falcon2Bionano_1069:HG2_10X_SVrefine210Xhap12_1942:HG3_PB_HySA_3982;NumClusterSVs=16;ExactMatchIDs=HG4_PB_HySA_3871;NumExactMatchSVs=1;ClusterMaxShiftDist=0.130624;ClusterMaxSizeDiff=0.130624;ClusterMaxEditDist=0.200565;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=338;DistBack=-9;DistForward=61950;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=2:192840045-192840053;PctSeqSimilarity=0.9784;PctSizeSimilarity=0.9797;PctRecOverlap=0.9768;SizeDiff=-7;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=97;MatchId=2986.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:./.:0:1:0:6:./.:1:8:0:5:1/1:0:8:0/1:5:29:.:.:.
chr2	192901995	HG4_Ill_GATKHCSBGrefine_1771	A	AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG2_PB_HySA_4862:HG4_Ill_Krunchall_3684:HG2_PB_pbsv_2550:HG4_Ill_GATKHCSBGrefine_1771:HG4_PB_pbsv_2561:HG4_Ill_250bpfermikitraw_3481:HG2_Ill_GATKHCSBGrefine_1688:HG4_Ill_GATKHC_4232:HG2_PB_assemblyticsfalcon_14535;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1688:HG4_Ill_250bpfermikitraw_3481:HG4_Ill_GATKHCSBGrefine_1771:HG4_Ill_Krunchall_3684;NumExactMatchSVs=4;ClusterMaxShiftDist=0.266667;ClusterMaxSizeDiff=0.266667;ClusterMaxEditDist=0.35;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=86;REFWIDENED=2:192901996-192902081;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2987.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:38:./.:28:10:4:11:1|0:0:9:11:0:0/1:24:11:./.:.:.:.:.:.
chr2	193720005	HG2_Ill_GATKHC_4181	T	TATATATATATATATAATATATATATATATAATATATATATATATAATATATATATATATA	20	PASS	ClusterIDs=HG3_PB_pbsv_2547:HG3_Ill_Krunchall_3558:HG2_PB_HySA_4871:HG2_Ill_GATKHC_4181:HG2_PB_assemblyticsfalcon_14544:HG2_Ill_GATKHCSBGrefine_1692:HG2_PB_pbsv_2554:HG2_Ill_150bpfermikitraw_3222;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3222:HG2_Ill_GATKHCSBGrefine_1692:HG2_Ill_GATKHC_4181:HG3_Ill_Krunchall_3558;NumExactMatchSVs=4;ClusterMaxShiftDist=0.266667;ClusterMaxSizeDiff=0.266667;ClusterMaxEditDist=0.3;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=57;REFWIDENED=2:193719994-193720050;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2989.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:./.:11:25:11:0:./.:9:3:1:2:0/1:27:5:./.:.:.:.:.:.
chr2	194545027	HG4_PB_SVrefine2PBcRDovetail_1351	T	TGGATCTCGCAAATTTTATTTTTTTTTTATTTTTATTTTTTTTTTTTTTTAGTATTGATGATTTATTGATTTCTGAGAAGCTCACAGCTGTTCTTTGTGCCATGAAATCATTGTACTGCATTTAGAAAGCTATTCTTTTGTTTTTTATGATTGGAAACCTTTTATATTCCATTTTGTGTAATACAGAACATTTTAAAATACATTTCACAATTTCTAAATTTCAATATAATTATTAAAAAATGATTACTTCAGACTAGTCTCTTACAAATGTTACTAAACACAAATATTATACATAAAAGGCCATCTTCATTAAATAGATTAGAATGAATTACTCCTTCAGCTACATTCCCACTGTAAGAGAATACATTCTTGGGGAATATATTCTGTGTATATGTATTATGTCTTATTTTATGTTTTTATCATTTATATATATTTTTCATTTTTAATCTTTTTTTTTTTTTTTTTAAGTTGAAAATTTTTTTTTTTTTATTTATTTTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCAGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCCGGCCGGGCGGGGGGCTGACCCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCTCCCGGACGGGACGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACTGGGCGGCAGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGATGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGCTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACAGGGTTGCGGCCCAGGAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGATGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTCCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGAGGCTCCTCGTATCCCAGACGATGGGGGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCGGGGCAGAGGCTGCAATCTCGGCACTTTGGGGGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCGAGCCGAGATCACACCACTGCACTCCAGCCTGGGCAACATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTCAGGAGCTGGAGACCAGCCCGGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGTGCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCGTGGAAGGAGACCGTGGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_16780:HG2_PB_pbsv_2557:HG4_PB_pbsv_2566:HG4_PB_assemblyticsfalcon_14328:HG2_PB_SVrefine2PB10Xhap12_1916:HG4_PB_SVrefine2Falcon1Dovetail_1536:HG4_PB_SVrefine2PBcRDovetail_1351:HG2_PB_SVrefine2Falcon2Bionano_1074:HG3_PB_SVrefine2Falcon1Dovetail_1590:HG2_PB_HySA_4880;NumClusterSVs=10;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_1351;NumExactMatchSVs=1;ClusterMaxShiftDist=0.102245;ClusterMaxSizeDiff=0.10223;ClusterMaxEditDist=0.194545;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=3369;DistBack=87159;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:194545028-194545044;PctSeqSimilarity=0.9962;PctSizeSimilarity=0.9932;PctRecOverlap=0.9929;SizeDiff=-23;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2990.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:50:./.:26:9:3:18:./.:0:3:16:0:0/1:23:6:0/1:125:241:.:3187:.
chr2	194923101	HG3_Ill_SVrefine2DISCOVARDovetail_1903	T	TAAATAGAGAAGCATGCCTATTCATGGATTGGAATGCCTGATATAAGAAAGAGCTAATTCTCCCAAATGTATCTATAGGTTTATTGTAATTAATTTCTTTCAAGCTCCCTGAAAGTCTCTTATGTAAATAGATAGTAAATACATAAATTTACTCTAAAATGTACGTGGAAGGACAAAGGTCCTAGAATAGCTGAACATTGACATAACTCACATTTTATGCAAAAATAGATTCACAATCAACCATGGAGTTTAATGTGAAATGTTAATGTATAAAATTTAGAAAAACATATGAGAAAAGCTTCAGGAAAAAGGGCTAAGCAAATGGTTCTTAGATTTGACACCAAATTCATTACTGATAAAAGGCAAAATAAGTTGGAGTTCAGGAAAATTAAAAACATTTGCTTAGCAGAAGCTCATGTGAAGATAAAAAGATAAGTTACATACTCTGAGAAAATATTTTCAAACCACATATCTGACAAACAATTAAAATCAAGAATGTGAAAAGAACTCTCAAAACGTAACCATAAAACAACATAAAACCCAATTGTAAAATAGGAAACAAACATGAACAGAAATTTTGCTGAAAAGAAAGTATAAATGATAATACAAACATAAAAAGATGTTTAACTTCAGTAGTCATTATTTAAGTGTAATTTAAAAACAATCATAAGAGATCACTATAGACATAACAGAATTTGTAAATTAAAACAAAACAACAAGTAGAGCACCAAAAATAGCAAATACATAAAAATTGAATCACTCATGCATTAATGAGGGAAAATTGTTTGACAATTCTTTATAAAATAAAACATTTAATTAGCAATGACCCAGAAACCCTTGGACATTTATCCCAGAGAAATAAAACTTGCATTCACAACAAACAAACAAAACATCTGTACAATAATATTCACACTATCTTTATTTGTCATAGCTGAAACCTGGAAACAGCTCAGATGTCCTTAAGCAGGTGAATAGTTAAACAAAGGGTGTTAATACATTCCACTAGATATAACACGACAATAATAAAAAGAAACCAAGCATTAGTACACTTAACAACTTAGATGAATCTCCAGGAAATTATGCTTAGTAAAGAAAGTCAAATCCAAGAGGTTATATACCATATGATTTGCTTTATATAATATTTTTGAAATGGTAACATCTTAGAATGTTACCATTTCAAACCATAAATGGAGAACAGATTTATGGTTGCCGTGGACTATTAGGGATGGATTTGTAGGTTCTTGTGGTGGTAGCAGTGGTAGAGTGAGGCAAGAGTGAGGTGGGTGTGTCTATAAAAAAGCACCAGAATAAATCCAGAGGAATCCTTGTAGTACTGACACTATCCACTATCTCCACTGTGTTGGTGGATACTCAAACCTACACAGGTGATAAAATTGCTAAGAACTTACAGTAGATAAACACACACACACACACACAAACACACACACACACAAATGAGTACAAGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3241:HG3_PB_pbsv_2553:HG4_PB_pbsv_2571:HG4_PB_SVrefine2PBcRDovetail_1355:HG4_Ill_SVrefine2DISCOVARDovetail_1925:HG3_Ill_SVrefine2DISCOVARDovetail_1903:HG2_PB_SVrefine2PBcRplusDovetail_6064:HG2_PB_SVrefine2Falcon2Bionano_1077:HG2_PB_SVrefine2Falcon1plusDovetail_6537:HG2_Ill_SVrefine2DISCOVARplusDovetail_7158:HG2_10X_SVrefine210Xhap12_1953:HG4_PB_SVrefine2Falcon1Dovetail_1538:HG3_PB_SVrefine2Falcon1Dovetail_1592:HG4_PB_HySA_3885;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1953:HG2_Ill_SVrefine2DISCOVARplusDovetail_7158:HG2_PB_SVrefine2Falcon1plusDovetail_6537:HG2_PB_SVrefine2Falcon2Bionano_1077:HG2_PB_SVrefine2PBcRplusDovetail_6064:HG3_Ill_SVrefine2DISCOVARDovetail_1903:HG4_Ill_SVrefine2DISCOVARDovetail_1925:HG4_PB_SVrefine2PBcRDovetail_1355;NumExactMatchSVs=8;ClusterMaxShiftDist=0.033557;ClusterMaxSizeDiff=0.033557;ClusterMaxEditDist=0.148344;PBcalls=9;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1465;DistBack=8498;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=2:194923102-194923104;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2991.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:110:./.:0:5:0:0:./.:0:5:0:9:1/1:0:45:./.:20:183:.:1240:.
chr2	195218661	HG3_Ill_svaba_3275	G	GTGCGGAAGAACAACAAGTAGGTACTAGGGCCTTGGATTTTGGATAGGATTTCTAGACTTACTCTGGGCCATAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1955:HG2_PB_HySA_4892:HG2_PB_pbsv_2565:HG2_PB_HySA_4891:HG4_PB_pbsv_2576:HG4_Ill_svaba_3243:HG3_PB_pbsv_2557:HG3_PB_HySA_4005:HG2_PB_HySA_4890:HG4_Ill_Krunchall_3712:HG4_Ill_GATKHC_4264:HG4_Ill_250bpfermikitraw_3511:HG4_Ill_150bpfermikitraw_3387:HG3_Ill_svaba_3275:HG3_Ill_Krunchall_3574:HG3_Ill_GATKHC_4336:HG3_Ill_250bpfermikitraw_3463:HG3_Ill_150bpfermikitraw_3341:HG2_Ill_svaba_3154:HG2_Ill_Krunchall_3547:HG2_Ill_GATKHC_4198:HG2_Ill_250bpfermikitraw_3495:HG2_Ill_150bpfermikitraw_3244:HG4_PB_SVrefine2PBcRDovetail_1357:HG4_PB_SVrefine2Falcon1Dovetail_1539:HG4_Ill_SVrefine2DISCOVARDovetail_1927:HG3_PB_SVrefine2Falcon1Dovetail_1593:HG3_Ill_SVrefine2DISCOVARDovetail_1904:HG2_PB_SVrefine2PBcRplusDovetail_6065:HG2_PB_SVrefine2Falcon2Bionano_1078:HG2_PB_SVrefine2Falcon1plusDovetail_6538:HG2_Ill_SVrefine2DISCOVARplusDovetail_7159;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3244:HG2_Ill_250bpfermikitraw_3495:HG2_Ill_GATKHC_4198:HG2_Ill_Krunchall_3547:HG2_Ill_svaba_3154:HG3_Ill_150bpfermikitraw_3341:HG3_Ill_250bpfermikitraw_3463:HG3_Ill_GATKHC_4336:HG3_Ill_Krunchall_3574:HG3_Ill_svaba_3275:HG4_Ill_150bpfermikitraw_3387:HG4_Ill_250bpfermikitraw_3511:HG4_Ill_GATKHC_4264:HG4_Ill_Krunchall_3712:HG4_Ill_svaba_3243;NumExactMatchSVs=15;ClusterMaxShiftDist=0.115385;ClusterMaxSizeDiff=0.102564;ClusterMaxEditDist=0.301887;PBcalls=13;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=73;DistBack=21696;DistForward=70;DistMin=70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=80;REFWIDENED=2:195218654-195218733;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2992.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:56:./.:1:3:1:1:./.:1:9:1:15:1/1:1:47:./.:.:.:.:.:.
chr2	195227030	HG2_Ill_150bpfermikitraw_3245	G	GTGTCTCTTTTGAATTATAGCTCTTCTTTCCTCATATTTTCCATATTGTCTTATATTTATCATCATCTACTATACTACACTTCTTTATTTATATACTTTAAGTTCTGGGGTACATGTGGAGAGTGTGCAGGTTTGTTACATAGGTATACATGTGCCATGGTGGTTTGCTGCACCCATCAACC	20	PASS	ClusterIDs=HG2_PB_pbsv_2566:HG4_PB_pbsv_2577:HG2_PB_HySA_4893:HG3_PB_SVrefine2Falcon1Dovetail_1594:HG4_PB_SVrefine2PBcRDovetail_1358:HG4_PB_SVrefine2Falcon1Dovetail_1540:HG4_Ill_svaba_3244:HG4_Ill_manta_629:HG4_Ill_SVrefine2DISCOVARDovetail_1928:HG4_Ill_MetaSV_2804:HG4_Ill_GATKHCSBGrefine_1784:HG4_Ill_250bpfermikitraw_3512:HG4_Ill_150bpfermikitraw_3388:HG3_Ill_svaba_3276:HG3_Ill_manta_582:HG3_Ill_Spiral_2776:HG3_Ill_SVrefine2DISCOVARDovetail_1905:HG3_Ill_MetaSV_2856:HG3_Ill_GATKHCSBGrefine_1720:HG3_Ill_250bpfermikitraw_3464:HG3_Ill_150bpfermikitraw_3342:HG2_PB_SVrefine2PBcRplusDovetail_6066:HG2_PB_SVrefine2Falcon2Bionano_1079:HG2_PB_SVrefine2Falcon1plusDovetail_6539:HG2_Ill_svaba_3155:HG2_Ill_manta_728:HG2_Ill_SVrefine2DISCOVARplusDovetail_7160:HG2_Ill_MetaSV_2718:HG2_Ill_GATKHCSBGrefine_1701:HG2_Ill_250bpfermikitraw_3496:HG2_Ill_150bpfermikitraw_3245:HG2_10X_SVrefine210Xhap12_1956:HG3_PB_pbsv_2558;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1956:HG2_Ill_150bpfermikitraw_3245:HG2_Ill_250bpfermikitraw_3496:HG2_Ill_GATKHCSBGrefine_1701:HG2_Ill_MetaSV_2718:HG2_Ill_SVrefine2DISCOVARplusDovetail_7160:HG2_Ill_manta_728:HG2_Ill_svaba_3155:HG2_PB_SVrefine2Falcon1plusDovetail_6539:HG2_PB_SVrefine2Falcon2Bionano_1079:HG2_PB_SVrefine2PBcRplusDovetail_6066:HG3_Ill_150bpfermikitraw_3342:HG3_Ill_250bpfermikitraw_3464:HG3_Ill_GATKHCSBGrefine_1720:HG3_Ill_MetaSV_2856:HG3_Ill_SVrefine2DISCOVARDovetail_1905:HG3_Ill_Spiral_2776:HG3_Ill_manta_582:HG3_Ill_svaba_3276:HG4_Ill_150bpfermikitraw_3388:HG4_Ill_250bpfermikitraw_3512:HG4_Ill_GATKHCSBGrefine_1784:HG4_Ill_MetaSV_2804:HG4_Ill_SVrefine2DISCOVARDovetail_1928:HG4_Ill_manta_629:HG4_Ill_svaba_3244:HG4_PB_SVrefine2Falcon1Dovetail_1540:HG4_PB_SVrefine2PBcRDovetail_1358;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0536193;ClusterMaxSizeDiff=0.0482574;ClusterMaxEditDist=0.16;PBcalls=10;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=181;DistBack=-1;DistForward=4;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=2:195227031-195227034;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2993.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:./.:0:37:0:3:./.:1:16:0:13:1/1:0:31:./.:.:.:.:.:.
chr2	195578279	HG2_Ill_GATKHCSBGrefine_1706	T	TAATAACACAGAGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16791:HG2_PB_HySA_4901:HG3_PB_pbsv_2563:HG4_PB_pbsv_2582:HG2_PB_pbsv_2573:HG2_PB_HySA_4900:HG3_PB_HySA_4012:HG3_PB_SVrefine2Falcon1Dovetail_1599:HG4_PB_SVrefine2Falcon1Dovetail_1545:HG3_Ill_MetaSV_2858:HG3_Ill_GATKHCSBGrefine_1724:HG2_Ill_GATKHCSBGrefine_1706:HG2_PB_SVrefine2PBcRplusDovetail_6071:HG2_PB_SVrefine2PB10Xhap12_1924:HG2_PB_SVrefine2Falcon2Bionano_1084:HG4_Ill_MetaSV_2806:HG2_Ill_MetaSV_2721:HG2_10X_SVrefine210Xhap12_1960:HG2_PB_SVrefine2Falcon1plusDovetail_6545:HG4_PB_HySA_3896:HG2_Ill_breakscan11_3243;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1706:HG3_Ill_GATKHCSBGrefine_1724:HG3_Ill_MetaSV_2858:HG4_PB_SVrefine2Falcon1Dovetail_1545;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0557276;ClusterMaxEditDist=0.19542;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=317;DistBack=9551;DistForward=26184;DistMin=9551;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:195578280-195578293;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2994.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:79:1/1:1:7:1:16:./.:0:11:0:2:1/1:0:33:1/1:2:67:.:.:.
chr2	195779849	HG2_Ill_GATKHC_4208	G	GAATAGTTTGAATATTTATGTTAGGTTTATCACTGATCTCCTTTCGTTTTCTAGTTTTGCAATCATCTCATCTGAAAATAGAGTTT	20	PASS	ClusterIDs=HG2_PB_HySA_4902:HG2_10X_SVrefine210Xhap12_1962:HG4_PB_HySA_3897:HG4_PB_pbsv_2583:HG4_Ill_svaba_3251:HG2_PB_pbsv_2574:HG4_Ill_Krunchall_3717:HG4_Ill_GATKHCSBGrefine_1788:HG4_Ill_250bpfermikitraw_3516:HG2_Ill_svaba_3163:HG2_Ill_Krunchall_3553:HG2_Ill_GATKHC_4208:HG2_Ill_GATKHCSBGrefine_1707:HG2_Ill_250bpfermikitraw_3501:HG2_Ill_150bpfermikitraw_3250;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3250:HG2_Ill_250bpfermikitraw_3501:HG2_Ill_GATKHCSBGrefine_1707:HG2_Ill_GATKHC_4208:HG2_Ill_Krunchall_3553:HG2_Ill_svaba_3163:HG4_Ill_250bpfermikitraw_3516:HG4_Ill_GATKHCSBGrefine_1788:HG4_Ill_Krunchall_3717:HG4_Ill_svaba_3251;NumExactMatchSVs=10;ClusterMaxShiftDist=0.130435;ClusterMaxSizeDiff=0.130435;ClusterMaxEditDist=0.274725;PBcalls=4;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=85;DistBack=91932;DistForward=24444;DistMin=24444;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=85;REFWIDENED=2:195779850-195779934;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2995.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:24:3:4:22:1|0:2:34:6:0:0/1:19:35:./.:.:.:.:.:.
chr2	195810914	HG2_Ill_FB_2336	T	TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_14343:HG4_PB_pbsv_2584:HG3_PB_pbsv_2564:HG2_PB_HySA_4903:HG2_PB_pbsv_2575:HG3_PB_HySA_4013:HG2_PB_SVrefine2PB10Xhap12_1925:HG2_PB_SVrefine2Falcon2Bionano_1085:HG4_PB_SVrefine2PBcRDovetail_1361:HG3_Ill_250bpfermikitraw_3468:HG2_PB_SVrefine2PBcRplusDovetail_6072:HG2_Ill_SVrefine2DISCOVARplusDovetail_7165:HG2_Ill_Krunchall_3554:HG2_Ill_GATKHC_4209:HG2_Ill_GATKHCSBGrefine_1708:HG2_Ill_FB_2336:HG2_Ill_250bpfermikitraw_3502:HG4_Ill_SVrefine2DISCOVARDovetail_1931:HG4_Ill_Krunchall_3718:HG4_Ill_GATKHC_4269:HG4_Ill_GATKHCSBGrefine_1789:HG4_Ill_FB_2348:HG4_Ill_250bpfermikitraw_3517:HG4_PB_HySA_3898:HG3_PB_SVrefine2Falcon1Dovetail_1600:HG2_PB_SVrefine2Falcon1plusDovetail_6546:HG2_Ill_breakscan11_3244:HG2_PB_PB10Xdip_16792;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3502:HG2_Ill_FB_2336:HG2_Ill_GATKHCSBGrefine_1708:HG2_Ill_GATKHC_4209:HG2_Ill_Krunchall_3554:HG2_Ill_SVrefine2DISCOVARplusDovetail_7165:HG2_PB_SVrefine2PBcRplusDovetail_6072:HG3_Ill_250bpfermikitraw_3468:HG4_PB_SVrefine2PBcRDovetail_1361;NumExactMatchSVs=9;ClusterMaxShiftDist=0.185185;ClusterMaxSizeDiff=0.185185;ClusterMaxEditDist=0.216216;PBcalls=14;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=4;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=2:195810915-195810952;PctSeqSimilarity=0.972;PctSizeSimilarity=0.9444;PctRecOverlap=0.9273;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=2996.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:69:1/1:6:41:0:13:1/1:1:20:1:19:1/1:0:59:./.:.:.:.:.:.
chr2	196017573	HG2_Ill_GATKHCSBGrefine_1711	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1547:HG2_PB_pbsv_2577:HG4_PB_assemblyticsfalcon_14345:HG4_PB_pbsv_2586:HG2_PB_assemblyticsfalcon_14571:HG4_Ill_GATKHCSBGrefine_1791:HG2_Ill_GATKHCSBGrefine_1711:HG2_PB_SVrefine2Falcon2Bionano_1086:HG2_Ill_MetaSV_2722:HG3_PB_SVrefine2Falcon1Dovetail_1601:HG2_PB_SVrefine2Falcon1plusDovetail_6548:HG2_PB_HySA_4905;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1711:HG4_Ill_GATKHCSBGrefine_1791;NumExactMatchSVs=2;ClusterMaxShiftDist=0.141538;ClusterMaxSizeDiff=0.141538;ClusterMaxEditDist=0.198425;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=84377;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:196017574-196017573;PctSeqSimilarity=0.9781;PctSizeSimilarity=0.9571;PctRecOverlap=0.9572;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=2997.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:36:./.:32:12:12:15:./.:4:6:23:0:0/1:35:11:0/1:10:27:.:.:.
chr2	196073114	HG2_PB_SVrefine2Falcon2Bionano_1089	T	TCTCACTACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3245:HG2_PB_pbsv_2580:HG4_PB_SVrefine2Falcon1Dovetail_1550:HG4_PB_assemblyticsfalcon_14348:HG2_PB_assemblyticsfalcon_14574:HG2_PB_SVrefine2Falcon2Bionano_1089:HG2_PB_SVrefine2Falcon1plusDovetail_6551;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1089;NumExactMatchSVs=1;ClusterMaxShiftDist=0.128936;ClusterMaxSizeDiff=0.128936;ClusterMaxEditDist=0.212894;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=336;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:196073115-196073128;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2998.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:33:./.:24:3:11:19:1|0:0:10:17:0:0/1:24:13:0/1:10:28:.:.:.
chr2	198763448	HG3_Ill_GATKHCSBGrefine_1736	T	TTTCCTAGTTTCTTTCTTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCATTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTAC	20	PASS	ClusterIDs=HG2_PB_HySA_4934:HG3_PB_pbsv_2573:HG2_PB_pbsv_2588:HG2_PB_assemblyticsfalcon_14596:HG4_PB_assemblyticsfalcon_14362:HG4_PB_HySA_3922:HG4_PB_pbsv_2595:HG2_PB_SVrefine2Falcon2Bionano_1093:HG3_PB_HySA_4035:HG2_PB_SVrefine2PB10Xhap12_1936:HG2_PB_SVrefine2Falcon1plusDovetail_6557:HG4_Ill_MetaSV_2814:HG4_PB_SVrefine2PBcRDovetail_1369:HG4_Ill_SVrefine2DISCOVARDovetail_1940:HG4_Ill_GATKHCSBGrefine_1800:HG3_Ill_GATKHCSBGrefine_1736:HG2_Ill_MetaSV_2728:HG4_PB_SVrefine2Falcon1Dovetail_1556:HG2_PB_HySA_4935:HG2_Ill_breakscan11_3246:HG3_PB_SVrefine2Falcon1Dovetail_1607;NumClusterSVs=21;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_1736:HG4_Ill_GATKHCSBGrefine_1800:HG4_Ill_SVrefine2DISCOVARDovetail_1940:HG4_PB_SVrefine2PBcRDovetail_1369;NumExactMatchSVs=4;ClusterMaxShiftDist=0.174757;ClusterMaxSizeDiff=0.174757;ClusterMaxEditDist=0.269841;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=314;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:198763449-198763462;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2999.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:47:0|1:17:2:2:25:1|0:0:5:29:0:0/1:38:16:0/1:9:36:.:.:.
chr2	198787679	HG2_PB_SVrefine2Falcon1plusDovetail_6558	GAC	CCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCAGATGGGGCAGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACCGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCGGGCAGAGGGCTGACCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1094:HG3_PB_SVrefine2Falcon1Dovetail_1608:HG2_PB_assemblyticsfalcon_14597:HG2_PB_SVrefine2Falcon1plusDovetail_6558:HG4_PB_SVrefine2Falcon1Dovetail_1557;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6558:HG2_PB_assemblyticsfalcon_14597;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.107563;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=295;DistBack=-3;DistForward=1163;DistMin=-3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=270;REFWIDENED=2:198787409-198787678;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9768;PctRecOverlap=0.9043;SizeDiff=-7;StartDistance=25;EndDistance=27;GTMatch=0;TruScore=95;MatchId=3000.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:22:0|1:39:3:2:19:./.:7:0:0:0:0/0:24:1:./.:.:.:.:.:.
chr2	201194937	HG4_Ill_SVrefine2DISCOVARDovetail_1949	C	TGTTATTGTTAATCAGTATTGGTATTTGAATAGGGATATCCAAAGTATTTGCTGAACAGAAAGCATGTTGTTTTAGGTCCATATTTTCCCTGAAAGTATTTTTATTATTATCATTTTTAAAATTTTTCCCTCCAATGGTCTTATTTAAATTAATTTACTTAACAAGCCGTATATTCCTTGTGG	20	PASS	ClusterIDs=HG4_PB_pbsv_2602:HG4_Ill_manta_638:HG2_PB_SVrefine2PB10Xhap12_1940:HG2_PB_assemblyticsPBcR_14211:HG2_PB_SVrefine2PBcRplusDovetail_6085:HG4_PB_SVrefine2PBcRDovetail_1373:HG4_Ill_SVrefine2DISCOVARDovetail_1949:HG4_Ill_Cortex_1971:HG3_Ill_manta_591:HG3_Ill_Spiral_2809:HG3_Ill_SVrefine2DISCOVARDovetail_1933:HG3_Ill_Cortex_2015:HG2_Ill_SpiralSDKrefine_9286:HG2_Ill_Cortex_4664:HG2_10X_SVrefine210Xhap12_1984:HG2_Ill_breakscan11_3247:HG2_PB_pbsv_2596:HG3_PB_pbsv_2583:HG4_Ill_GATKHCSBGrefine_1805:HG3_Ill_GATKHCSBGrefine_1747:HG2_Ill_GATKHCSBGrefine_1729:HG2_PB_PB10Xdip_16811:HG4_Ill_MetaSV_2817:HG3_Ill_MetaSV_2866:HG2_Ill_MetaSV_2733:HG4_Ill_svaba_3288:HG3_Ill_svaba_3317:HG2_Ill_svaba_3197;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1984:HG2_Ill_Cortex_4664:HG2_Ill_SpiralSDKrefine_9286:HG3_Ill_Cortex_2015:HG3_Ill_SVrefine2DISCOVARDovetail_1933:HG3_Ill_Spiral_2809:HG3_Ill_manta_591:HG4_Ill_Cortex_1971:HG4_Ill_SVrefine2DISCOVARDovetail_1949:HG4_Ill_manta_638;NumExactMatchSVs=10;ClusterMaxShiftDist=0.192513;ClusterMaxSizeDiff=0.192513;ClusterMaxEditDist=0.24;PBcalls=8;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=182;DistBack=65922;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:201194938-201194936;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9945;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3002.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:48:0|1:20:4:2:35:1|0:0:26:17:0:0/1:26:14:./.:.:.:.:.:.
chr2	202279657	HG3_PB_SVrefine2Falcon1Dovetail_1616	G	TATTAATATTAATATTTATTATTTAATTTTATAATTAAATAATTATAATTATATAATTAAATTTTATAATTAATATAATTATATAATTAAATTTTATAATTAATATAATTTAATAT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2735:HG4_PB_assemblyticsfalcon_14388:HG4_PB_SVrefine2Falcon1Dovetail_1563:HG4_PB_SVrefine2PBcRDovetail_1375:HG4_Ill_manta_639:HG4_Ill_SVrefine2DISCOVARDovetail_1953:HG3_PB_SVrefine2Falcon1Dovetail_1616:HG3_Ill_manta_593:HG3_Ill_Spiral_2818:HG3_Ill_SVrefine2DISCOVARDovetail_1938:HG2_PB_assemblyticsPBcR_14221:HG2_PB_SVrefine2PBcRplusDovetail_6088:HG2_PB_SVrefine2Falcon2Bionano_1100:HG2_Ill_manta_745:HG2_Ill_SpiralSDKrefine_9293:HG2_Ill_SVrefine2DISCOVARplusDovetail_7190:HG2_10X_SVrefine210Xhap12_1988:HG4_PB_HySA_3938:HG2_PB_assemblyticsfalcon_14625:HG2_PB_SVrefine2Falcon1plusDovetail_6566:HG4_PB_pbsv_2605:HG2_PB_pbsv_2599:HG4_Ill_svaba_3296:HG4_Ill_GATKHCSBGrefine_1808:HG4_Ill_250bpfermikitraw_3563:HG4_Ill_150bpfermikitraw_3441:HG3_Ill_svaba_3325:HG3_Ill_GATKHCSBGrefine_1750:HG3_Ill_250bpfermikitraw_3512:HG3_Ill_150bpfermikitraw_3393:HG2_Ill_svaba_3206:HG2_Ill_GATKHCSBGrefine_1732:HG2_Ill_250bpfermikitraw_3550:HG2_Ill_150bpfermikitraw_3296:HG3_PB_pbsv_2586:HG4_Ill_MetaSV_2819:HG3_Ill_MetaSV_2868;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1988:HG2_Ill_SVrefine2DISCOVARplusDovetail_7190:HG2_Ill_SpiralSDKrefine_9293:HG2_Ill_manta_745:HG2_PB_SVrefine2Falcon2Bionano_1100:HG2_PB_SVrefine2PBcRplusDovetail_6088:HG2_PB_assemblyticsPBcR_14221:HG3_Ill_SVrefine2DISCOVARDovetail_1938:HG3_Ill_Spiral_2818:HG3_Ill_manta_593:HG3_PB_SVrefine2Falcon1Dovetail_1616:HG4_Ill_SVrefine2DISCOVARDovetail_1953:HG4_Ill_manta_639:HG4_PB_SVrefine2PBcRDovetail_1375;NumExactMatchSVs=14;ClusterMaxShiftDist=0.079646;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.204444;PBcalls=13;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=115;DistBack=-1;DistForward=2117;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:202279658-202279656;PctSeqSimilarity=0.9958;PctSizeSimilarity=0.9914;PctRecOverlap=0.9658;SizeDiff=-1;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=98;MatchId=3004.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:74:./.:0:21:2:5:1/1:0:18:0:17:1/1:0:48:./.:.:.:.:.:.
chr2	202631445	HG4_Ill_GATKHCSBGrefine_1810	G	GAAAATGTGGCACATAGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_2606:HG2_PB_pbsv_2601:HG2_PB_assemblyticsfalcon_14629:HG4_PB_assemblyticsfalcon_14393:HG2_PB_HySA_4969:HG4_PB_HySA_3941:HG2_PB_SVrefine2Falcon1plusDovetail_6568:HG4_Ill_MetaSV_2820:HG4_PB_SVrefine2PBcRDovetail_1377:HG4_Ill_GATKHCSBGrefine_1810:HG3_PB_SVrefine2Falcon1Dovetail_1617:HG4_PB_SVrefine2Falcon1Dovetail_1565;NumClusterSVs=12;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_1810:HG4_PB_SVrefine2PBcRDovetail_1377;NumExactMatchSVs=2;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.187982;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=321;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:202631446-202631460;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3005.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:39:1|0:6:34:30:0:./.:0:3:23:0:0/1:20:14:0/1:9:35:.:.:.
chr2	203409930	HG2_PB_SVrefine2Falcon2Bionano_1103	T	TCCCCCTCCCCTCCCCCTCCACCTCCCCCTCTGCCTCCCCCTCCCCTCCGCTTCCCCCCACCTCTTCCCCCTTCCCTCTGCTTCCCTCTCTCCCCTCCTCCCCACTTCCCCTCCTTCCCCCCTTCCCCTCCTTC	20	PASS	ClusterIDs=HG4_PB_pbsv_2608:HG3_PB_SVrefine2Falcon1Dovetail_1619:HG2_PB_PB10Xdip_16813:HG4_PB_assemblyticsfalcon_14399:HG2_PB_assemblyticsfalcon_14636:HG2_PB_SVrefine2Falcon1plusDovetail_6570:HG3_PB_HySA_4063:HG2_PB_HySA_4979:HG4_PB_SVrefine2Falcon1Dovetail_1566:HG2_Ill_manta_748:HG4_PB_SVrefine2PBcRDovetail_1378:HG3_Ill_SVrefine2DISCOVARDovetail_1949:HG2_PB_SVrefine2PBcRplusDovetail_6092:HG2_PB_SVrefine2PB10Xhap12_1945:HG2_PB_SVrefine2Falcon2Bionano_1103:HG2_10X_SVrefine210Xhap12_1994:HG4_PB_HySA_3947:HG2_PB_pbsv_2604:HG3_PB_pbsv_2590;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1994:HG2_PB_SVrefine2Falcon2Bionano_1103:HG2_PB_SVrefine2PB10Xhap12_1945:HG2_PB_SVrefine2PBcRplusDovetail_6092:HG3_Ill_SVrefine2DISCOVARDovetail_1949;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0988593;ClusterMaxSizeDiff=0.0988593;ClusterMaxEditDist=0.26616;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=133;DistBack=-15;DistForward=-1;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:203409931-203409945;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9925;PctRecOverlap=0.9556;SizeDiff=-1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=98;MatchId=3007.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:31:1/1:1:16:1:7:1/1:0:13:0:11:1/1:0:8:./.:.:.:.:.:.
chr2	203442284	HG4_PB_SVrefine2Falcon1Dovetail_1567	T	CCCTCCCCTCCCCTCCCCCCTCCCCTCCTCTCCCCTCCCCCTCCCCTCCCTCCCCCCTCCCCTCCCCTTCCCTTCCCCCTCCCCTCCCTTCCCTCCTCTCCCTTCCCCTCCCTTCCCTCCCCTCCCTCTCTC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_1379:HG4_PB_assemblyticsfalcon_14400:HG4_PB_SVrefine2Falcon1Dovetail_1567:HG2_PB_PB10Xdip_16814:HG2_PB_pbsv_2605:HG4_PB_HySA_3948:HG3_PB_HySA_4064:HG2_PB_HySA_4980:HG3_PB_pbsv_2591:HG2_PB_SVrefine2Falcon1plusDovetail_6571:HG4_PB_pbsv_2609:HG3_PB_SVrefine2Falcon1Dovetail_1620:HG2_PB_SVrefine2PBcRplusDovetail_6093:HG2_PB_SVrefine2Falcon2Bionano_1104:HG2_PB_SVrefine2PB10Xhap12_1946;NumClusterSVs=15;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_1567:HG4_PB_assemblyticsfalcon_14400;NumExactMatchSVs=2;ClusterMaxShiftDist=0.204082;ClusterMaxSizeDiff=0.204082;ClusterMaxEditDist=0.265372;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=131;DistBack=22;DistForward=13571;DistMin=22;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:203442285-203442283;PctSeqSimilarity=0.9477;PctSizeSimilarity=0.8973;PctRecOverlap=0.7891;SizeDiff=-15;StartDistance=23;EndDistance=23;GTMatch=0;TruScore=87;MatchId=3008.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:0:21:2:15:./.:4:6:3:6:0/1:5:4:./.:.:.:.:.:.
chr2	205138864	HG4_Ill_SVrefine2DISCOVARDovetail_1972	C	CTTCCTTAGGTAAGGAATAAAACAGGAAATAACTTGCAAATCAAGATAGTGCTTAAAAGCCTGCTGATTTTTCCAAGAATTCTGCCCTGTATCAGAGAGAGGCAAGCACTTATGAATGGCATGAGGTACACAGGGAGACAAATACTTTGGCTTGCACCTTCTTACCTTCCTTAAGCAAAGCCCTTTATTCTGGTGCAGGCCAAAGTATTTGTCTCCCTGTGTACCTCATGCCATTCATAAGTGCTTGCCTCTGTCTGATACAGAGCAGAATTCTTGGAAAAATCAGCAGGCTTTTAAGCACTATCTTGATTTGCAAGTTATTTCCTGTTTTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1998:HG3_PB_pbsv_2596:HG4_PB_pbsv_2613:HG2_PB_PB10Xdip_16819:HG2_Ill_breakscan11_3248:HG4_Ill_MetaSV_2822:HG4_Ill_GATKHCSBGrefine_1812:HG3_Ill_MetaSV_2871:HG3_Ill_GATKHCSBGrefine_1755:HG2_Ill_MetaSV_2738:HG2_Ill_GATKHCSBGrefine_1737:HG4_PB_HySA_3959:HG4_PB_assemblyticsfalcon_14412:HG3_PB_assemblyticsfalcon_14648:HG2_PB_assemblyticsfalcon_14652:HG2_PB_assemblyticsPBcR_14251:HG4_PB_SVrefine2PBcRDovetail_1383:HG4_PB_SVrefine2Falcon1Dovetail_1571:HG4_Ill_SVrefine2DISCOVARDovetail_1972:HG3_PB_SVrefine2Falcon1Dovetail_1624:HG3_Ill_SVrefine2DISCOVARDovetail_1957:HG2_PB_SVrefine2PBcRplusDovetail_6097:HG2_PB_SVrefine2PB10Xhap12_1950:HG2_PB_SVrefine2Falcon2Bionano_1107:HG2_PB_SVrefine2Falcon1plusDovetail_6574:HG2_Ill_SVrefine2DISCOVARplusDovetail_7203;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1998:HG4_PB_SVrefine2PBcRDovetail_1383:HG4_PB_SVrefine2Falcon1Dovetail_1571:HG4_Ill_SVrefine2DISCOVARDovetail_1972:HG3_PB_SVrefine2Falcon1Dovetail_1624:HG3_Ill_SVrefine2DISCOVARDovetail_1957:HG2_PB_SVrefine2PBcRplusDovetail_6097:HG2_PB_SVrefine2PB10Xhap12_1950:HG2_PB_SVrefine2Falcon2Bionano_1107:HG2_PB_SVrefine2Falcon1plusDovetail_6574:HG2_Ill_SVrefine2DISCOVARplusDovetail_7203;NumExactMatchSVs=11;ClusterMaxShiftDist=0.127854;ClusterMaxSizeDiff=0.127854;ClusterMaxEditDist=0.268293;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=331;DistBack=56909;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:205138865-205138881;PctSeqSimilarity=0.9971;PctSizeSimilarity=1;PctRecOverlap=0.9728;SizeDiff=0;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=98;MatchId=3009.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:1/1:0:21:1:19:1/1:0:17:0:16:1/1:1:31:1/1:1:38:.:.:.
chr2	205651909	HG3_Ill_MetaSV_2872	T	TAAGAGATCACTTCACCGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16820:HG2_PB_SVrefine2PB10Xhap12_1951:HG2_PB_SVrefine2PBcRplusDovetail_6098:HG4_PB_pbsv_2616:HG3_PB_pbsv_2597:HG2_PB_assemblyticsfalcon_14654:HG2_PB_HySA_4998:HG2_PB_pbsv_2611:HG4_Ill_MetaSV_2823:HG4_Ill_GATKHCSBGrefine_1814:HG3_Ill_MetaSV_2872:HG3_Ill_GATKHCSBGrefine_1756:HG2_PB_SVrefine2Falcon1plusDovetail_6575:HG2_Ill_GATKHCSBGrefine_1738:HG4_PB_SVrefine2Falcon1Dovetail_1572:HG2_Ill_breakscan11_3249:HG4_PB_HySA_3963;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1738:HG2_PB_SVrefine2Falcon1plusDovetail_6575:HG3_Ill_GATKHCSBGrefine_1756:HG3_Ill_MetaSV_2872:HG4_Ill_GATKHCSBGrefine_1814:HG4_Ill_MetaSV_2823;NumExactMatchSVs=6;ClusterMaxShiftDist=0.255613;ClusterMaxSizeDiff=0.252159;ClusterMaxEditDist=0.331606;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=314;DistBack=4774;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:205651910-205651925;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3011.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:37:./.:13:11:7:11:1|0:0:14:20:0:0/1:24:14:0/1:10:19:.:.:.
chr2	207090461	HG2_PB_SVrefine2PBcRplusDovetail_6104	GGTGC	CTGGGCCATTAGAAGGACGAGTTTTTTAATCTGAGTTGCTCTTGCACTGCCTGGCTAGATGACTTTAAGCATGTTTCTGAAATTATTCAAGCCCTGGTTTTTTAATCTGGTGAATGGGGATAATGATATTACCTATATCATAGTGTTGTTGTGAGGTTTCACTGAGACGGTATGTGTAAAGCACATAAAGAATAAAGTTTCAATAAATGCTTGTGTTATTATTATTACTTGCTATGAATTGCCCTAGATACTTTCTGGTTTTACTTTCTTTCTTTCTTTTTTTGTTTTTTGAGACAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCCACCTCCCTGGTTCAAGTGATTCTCCTGCTTCAGCCTCTCAAGTAGCTGGGATTACAGGTGCATGCCACTATGCCTGGCTAATTTTGTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCAGGTCTTGAACTCCTGACCTCAAGTGATCCACCTGCCTCAGCCTCCCAAAATGCTGGGATTACAGGTGTGAGCCACCATGCCCAGCCTTATACTTTCTTTTGAGACAGGGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCATGATCTGCAGCCTCGACCTCCTGGACTCAAGTGATCCTCCCATCTCAGCCTCCAAAGTAACTGGGACTCTAGGCATGTGCCCCCACCATGCCCAGCTAATTTTTTTTTCCTGTAGAGTTGGGGTCTCACTATAAATAGGTGAATCCCCAAACTGGGGTCGGTCCAGTAGAGTTCTTGACTTCACACAGGAAAGAATTCAAGAGTGAGCCAACAGAATAAAGTGAAAGCAATGGAAGCTTATTACAGGAATAGAGTATAGGAAAACGGCTGCTCCATAGACAGAGCAGGGCTACCCCACAGGCAGAGAGGAGCACATACGGATTGCCGTCTAGCTAGATCTATAGCCATTCCTTAATTATATGCTACATAAGGGGTGGGTCATTCACAGATTTTCTAGAAAAGGGGTGGAGAGGTTCCAGAACCAAGAGTTCCTCCCATTTTAAACCATATAAGGTAACTTTTGGGCGTTGCCATGGCATTCGTAAACTCATGGTGCTGGTGGGAGTGTCTTAGCATGCTAATGCATTATAATTGGCTTATAATGAGCAGTAAGGGCAATTAGAAGTCCCTTTCATCACCATCTTGGTGTAGCTGGTTTTGGCCAGTTTCTTTACACCATCCTGTTTTAATCATATTCTATTTTGATCAGCAGGATCATAACGGGTGCTCAGAAAACAAGTGCTGATGATCAACAACCTCAGCTACATTGCCCAGGTTGGTTTCTAACTCCTGGGCTCAAGTGATCCTCCTGCGTTGGCCTTCCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGCCCAGACTGGTTATACTTTCTATTGGTAAGGTGCTATGCCACCTCTTTACCCTGTGCCAGGGACCACAATTACCACCTAAAAATCCATTCCCTCCTTTCTTATCATCAGAACCACAGTTTTACTTAGGACAGCAGTATACTCAGACAAAACACTACAATTCCCAGCTTCCAGTGAAACTGAGCATGGCCACTAAGATTTCGGTAGAAAACACTGGCTGGGGCTTCAAGGAAAGCTGGCTCAGATTTCGAGGTATGACTTGGAAGGTCAACAAGATTCAGTAACTCTTTTGAACTACAAGGGCAAGACAAGTATAGGGGAGAAGTTATCAAAGCTCTCTCCGTTTAGAAATTCTTGAGGCACTGAAGTAATGCTAGCAACCTTTTATTTCCAGACTTTTTGTCTCTTGAGAGATACAAGCTCTTATGTGTTTAGGTCACCATTACTTTGAGTTTGTTATGATATGTTGCCAAACCAAGCTGTGACTCACGTACATCACACCGTGTTAAATTCCTTGAAAAATAAGGACAGCTTTCATCATTCAAGGTATCATTACAATAACGTCTCATTGTGTGAGGTAATCTGGGTAACTTTGTGTTCGAAACAAATAAATGAAAAACTTAACTGACTGCAAACTCTCCCTCACAGAATTTTTGTAAAGATGGAATGAAAAGAAAACACATAAGGTTACCTGTTTAGCACATTCCCTGACACATAGTGGTTACTTGGTTCATAGTGGCTAACATTATAGGGCTACCACAAAGGGAAACAAACTAGAAAAAAATCCTGTTTATCCTTGGAGTAAAAAGCAGGGATAATCATTTTTATAGCTTAGCCGTTGGCAATCTGTATTGTTATTTTCCTAACCTCTTTTTGTCTGACAATTCATTATTCAGGAGGATTTCAGCTCAAAAATAACTGAGAAGGCAAGGCCTTAAGGAAAGGCAATGGATTTCATGAGACTGGAATTACAAAAGGAGTGCCCTTCTACTTGAAGAGAGTGCCAGATAACAATTTGTAATCTCTGGATGTTATGTCTCTGGGATATGACCGCACCCTGTACCCAACATTTGAAGGGATTATGTCACTGTTGAGTGCTGGGGTAGGATGTAGATTCAGGAAAAGGCAGCTGTGCCTGCTGCTCAGAGTATTAGTTGGGCATGGGCTGTTTGTTGCCTCTTCATTCTTCTTCATAGGTCGCACATGCAAATTCAGGTGGAGTTGGTATGTAACATGTGGTGGAAATTTGGGCTGTGATGTCGAAAGGTGTTGGGTAAGCAGGTCTATTCTGAGCTGACTCTAGTCAGCCATATTGGTTCCAGCCAGTTTCAGCCTGTCACCCAATTTTGTTGCGAAGGGAAGGGATTGTAACAAACTGTTCCCATATCTGCTGCCCTGCAAGACAAGCTGGAGAATTTGTTGTTAGTTACCAAATTCTCTAACCCTGTGGGGCACAGTTTCCAGAGGTTGGCTTACTCTTTCCTGATTCTCTACTCCTATTTGCCAGCAGTATAGTCAGTAACACAACATGGAGGAGGAAGGGACTCAGTGGCTCTTTGTGAAGTTTTTATTTTATTTTATTTTTTGAGAGAGTCTCACTCTGTTGCCTAGGCTGGAGTACAGTGGCATGATCTCGGCTCACTACAACCTCTGCCTCCCAGATTCAAGAGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTACCATCATGCTCAGCTAATTTTTTTTGTATTTTTAGTGGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGCCTCAAGTGATCTGCCTGCCTCGGCTTCCCAAAGTGCTGGGATCACAGGCGTGAGCCACCGCACCCGGCCTGTGTGAAGTTTTTAAATGGTAAAAACATCTGTAAGGACCTTCCCCGCAACCTGTGATGGTCAGTGTGACAAATGACTAATAATTAACTTTGAAACTTTCATATGGACATCATTCCCAGAATGGAACCTGAGTGAGGTCACTATTCACATGCCAGGGATTTTTTTTTTTTTTTTTTTTTAAGACAGAATCTCACTCTTGTCGCCCAGGTTGGAGTTCAGTGGCGCAATCTCAGCTCACTGCAACTTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTGTACTTTTAGTAGAGACGGGGTTTCGCCATATTGGCCAGGCTGGTCTCAAACCCCTGACCTCAGGTGATCCACCCACCTCGGTCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACGGCACTCGGCCGCCAAGGATTTTTTTAAATTACCCTAGTCTGTTTTAGCATTGTGCTATTTTTAGTTAAGCTGTGAAAGAGTGAAAAAATGGAAGAGACAGCTCCTAGACACTGTGTATCTCATCTTAAATTTATTCTCACTGGTCTTAGGAGGAAGGCTTCTCTGAAAATTGTTGACAATGTCATGAGAGTCTTGGTGCACAAACATCTTATTGTAAAGCCAGTGTCCTAGATGATGTGTAAAACACACAAAAGGTAAGATTACTGCTTTCCCCGAATTCTGCACTGCTTATCCAAACTATGACCTAATTTAAGCGGAAGGAAACATTTTGTACAACAATCATTCATAGATATGTTTTATAGTATCGAATTGGTAACCACATTCTAAAATTATAAATCTTTTTTTGTGACCTGTAATCCCAACACTTTGGGAGGCCAAGGCAGGCAGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGACAACATGGTGAAACCCTGTCTCTAGTAAAAATACAAAAATTAACCAGGTGTAGTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTAATCCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATTGTGCCACTGCATTCCAGCCTGGGTGACAGAGCAAGACTGTGTCTCAAAAAGAAATCTTTTTATGACAGTGAAAAACAGGCTAATTCAGCTCTACATTATATATAAGAGACACACATAAATCAAAGAGATTATGGTATATCTATACAATGGAGTCTTTTGCAGGTGACAGAGAAATAAAGAAAATCTTTGCGTACTGATATAGAGTGATCACCAAGATATATTTTAGCAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_Spiral_176:HG4_PB_pbsv_2621:HG3_PB_pbsv_2604:HG2_PB_pbsv_2618:HG4_PB_HySA_3979:HG2_PB_HySA_5022:HG4_PB_SVrefine2PBcRDovetail_1387:HG3_PB_SVrefine2PBcRDovetail_1314:HG4_Ill_SVrefine2DISCOVARDovetail_1979:HG2_PB_SVrefine2PBcRplusDovetail_6104:HG2_Ill_SVrefine2DISCOVARplusDovetail_7212:HG2_10X_SVrefine210Xhap12_2009:HG2_PB_SVrefine2Falcon2Bionano_1113:HG3_PB_SVrefine2Falcon1Dovetail_1631:HG2_PB_SVrefine2Falcon1plusDovetail_6582:HG4_PB_SVrefine2Falcon1Dovetail_1578;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2009:HG2_Ill_SVrefine2DISCOVARplusDovetail_7212:HG2_PB_SVrefine2PBcRplusDovetail_6104:HG4_Ill_SVrefine2DISCOVARDovetail_1979;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0800335;ClusterMaxSizeDiff=0.0796145;ClusterMaxEditDist=0.221881;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=4602;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:207090466-207090460;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.9998;PctRecOverlap=0.9987;SizeDiff=1;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3012.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:106:1/1:1:10:0:7:1/1:0:8:0:10:1/1:0:53:1/1:0:576:.:4547:.
chr2	207114590	HG3_PB_pbsv_2605	T	TTGCTTTTCTTTTCTTTTTCTCTTTTCTTTTCTTTTCTTTCTTTTCTTTTCTTTCTTTTCTTTTCTTTTTCTTTTTTCTTTCTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTTCTTCTTTCTTTCTTTTCTTTCTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTAATTTTCTTTTCTTTCTTTCTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTCC	10	PASS	ClusterIDs=HG3_PB_pbsv_2605:HG2_PB_assemblyticsfalcon_14667:HG2_PB_pbsv_2619:HG2_PB_SVrefine2Falcon1plusDovetail_6583:HG2_PB_HySA_5023;NumClusterSVs=5;ExactMatchIDs=HG3_PB_pbsv_2605;NumExactMatchSVs=1;ClusterMaxShiftDist=0.120521;ClusterMaxSizeDiff=0.117264;ClusterMaxEditDist=0.149837;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=302;DistBack=1;DistForward=4313;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1235;REFWIDENED=2:207114591-207104774;PctSeqSimilarity=0.9467;PctSizeSimilarity=0.9152;PctRecOverlap=0.9154;SizeDiff=-28;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=92;MatchId=3013.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:20:./.:9:6:3:10:./.:2:4:14:0:0/1:19:5:0/1:10:11:.:.:.
chr2	207322951	HG2_PB_assemblyticsfalcon_14672	C	CACATGGACATAATAATAGTGCCCATCCCAGAGACTGTGGCTGGCCTACATGGCATCCCCCATGTAAAGTGGTTT	20	PASS	ClusterIDs=HG2_PB_pbsv_2621:HG4_PB_pbsv_2622:HG2_PB_HySA_5027:HG4_Ill_svaba_3344:HG4_Ill_manta_645:HG4_Ill_Krunchall_3822:HG4_Ill_GATKHCSBGrefine_1825:HG4_Ill_Cortex_1979:HG4_Ill_250bpfermikitraw_3612:HG4_Ill_150bpfermikitraw_3491:HG2_PB_assemblyticsfalcon_14672:HG2_Ill_svaba_3253:HG2_Ill_manta_753:HG2_Ill_SpiralSDKrefine_9321:HG2_Ill_Krunchall_3654:HG2_Ill_GATKHC_4325:HG2_Ill_GATKHCSBGrefine_1752:HG2_Ill_Cortex_4683:HG2_Ill_250bpfermikitraw_3597:HG2_Ill_150bpfermikitraw_3340;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3340:HG2_Ill_250bpfermikitraw_3597:HG2_Ill_Cortex_4683:HG2_Ill_GATKHCSBGrefine_1752:HG2_Ill_GATKHC_4325:HG2_Ill_Krunchall_3654:HG2_Ill_SpiralSDKrefine_9321:HG2_Ill_manta_753:HG2_Ill_svaba_3253:HG2_PB_assemblyticsfalcon_14672:HG4_Ill_150bpfermikitraw_3491:HG4_Ill_250bpfermikitraw_3612:HG4_Ill_Cortex_1979:HG4_Ill_GATKHCSBGrefine_1825:HG4_Ill_Krunchall_3822:HG4_Ill_manta_645:HG4_Ill_svaba_3344;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0784314;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.219355;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:207322950-207322952;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3015.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:32:./.:20:7:5:22:0|1:32:0:1:39:0/1:26:28:./.:.:.:.:.:.
chr2	207976888	HG2_PB_SVrefine2Falcon2Bionano_1114	T	TGGGCAAATGCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3251:HG2_PB_assemblyticsfalcon_14675:HG3_PB_pbsv_2609:HG4_PB_pbsv_2625:HG2_PB_pbsv_2623:HG4_PB_SVrefine2PBcRDovetail_1389:HG2_Ill_MetaSV_2742:HG2_PB_SVrefine2Falcon1plusDovetail_6584:HG4_Ill_MetaSV_2827:HG3_Ill_MetaSV_2876:HG2_PB_SVrefine2Falcon2Bionano_1114:HG2_PB_SVrefine2PB10Xhap12_1961:HG2_PB_SVrefine2PBcRplusDovetail_6106:HG4_PB_HySA_3987:HG2_PB_HySA_5035:HG2_PB_PB10Xdip_16841;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1114:HG3_Ill_MetaSV_2876:HG4_Ill_MetaSV_2827;NumExactMatchSVs=3;ClusterMaxShiftDist=0.108865;ClusterMaxSizeDiff=0.108865;ClusterMaxEditDist=0.177294;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=323;DistBack=12591;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:207976889-207976902;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3016.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:47:0|1:25:1:0:38:1|0:0:8:15:0:0/1:27:13:0/1:8:59:.:.:.
chr2	208472401	HG2_PB_SVrefine2PBcRplusDovetail_6107	T	TATCATACATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAATGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16842:HG3_PB_pbsv_2611:HG2_PB_pbsv_2625:HG2_PB_HySA_5042:HG4_PB_pbsv_2626:HG2_Ill_breakscan11_3252:HG4_PB_SVrefine2PBcRDovetail_1390:HG4_Ill_GATKHCSBGrefine_1827:HG2_PB_SVrefine2PBcRplusDovetail_6107:HG2_PB_SVrefine2PB10Xhap12_1962:HG3_Ill_MetaSV_2877:HG2_PB_SVrefine2Falcon2Bionano_1115:HG2_PB_SVrefine2Falcon1plusDovetail_6585:HG4_PB_SVrefine2Falcon1Dovetail_1581:HG3_PB_SVrefine2Falcon1Dovetail_1633:HG4_PB_HySA_3992:HG3_PB_HySA_4105;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1962:HG2_PB_SVrefine2PBcRplusDovetail_6107:HG4_Ill_GATKHCSBGrefine_1827;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0705882;ClusterMaxSizeDiff=0.0705882;ClusterMaxEditDist=0.20029;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=329;DistBack=-2;DistForward=16;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:208472402-208472417;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3017.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:0:16:1:8:./.:1:0:0:11:1/1:0:14:./.:5:37:2191:.:.
chr2	208532591	HG3_Ill_GATKHCSBGrefine_1773	A	AGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCACGCCCGGCCCTCTATTTGCTTTATATTTATCTTTCCAAACTCTCTCTCCCACCCTTCTTTTAAAATTTTGTTTCAAATTCATGATTTTGTTTTAGATAAGCTTCTTTTATTATTATTATTATTTTTCTTTTTTTTTTTTTATTTTGAGACAGAGTCTCCCTCTCTTCCCAGGCTGTGGTGTGATCTCAGCTCACTGCAACCTCTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAAATCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTATAGGCATGCGCCACCATGCCCAGCTAATTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCGACCTCAGGTGATCCACCCGCCTTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6587:HG4_PB_HySA_3993:HG4_PB_pbsv_2628:HG2_PB_pbsv_2627:HG2_PB_HySA_5043:HG2_PB_PB10Xdip_16843:HG4_Ill_MetaSV_2829:HG4_Ill_GATKHCSBGrefine_1829:HG3_Ill_MetaSV_2880:HG3_Ill_GATKHCSBGrefine_1773:HG2_PB_SVrefine2PB10Xhap12_1965:HG2_Ill_GATKHCSBGrefine_1756:HG4_PB_SVrefine2Falcon1Dovetail_1583:HG4_PB_SVrefine2PBcRDovetail_1392:HG4_Ill_SVrefine2DISCOVARDovetail_1985:HG3_Ill_SVrefine2DISCOVARDovetail_1968:HG2_PB_SVrefine2PBcRplusDovetail_6109:HG2_PB_SVrefine2PB10Xhap12_1964:HG2_PB_SVrefine2Falcon2Bionano_1117:HG2_10X_SVrefine210Xhap12_2016:HG3_PB_SVrefine2Falcon1Dovetail_1635;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1756:HG2_PB_SVrefine2PB10Xhap12_1965:HG3_Ill_GATKHCSBGrefine_1773:HG3_Ill_MetaSV_2880:HG4_Ill_GATKHCSBGrefine_1829:HG4_Ill_MetaSV_2829;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0705882;ClusterMaxSizeDiff=0.0658824;ClusterMaxEditDist=0.227219;PBcalls=13;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=423;DistBack=-47;DistForward=36;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=305;REFWIDENED=2:208532334-208532638;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3018.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:55:1/1:1:30:0:20:1/1:1:11:0:10:1/1:0:9:1/1:4:83:.:.:.
chr2	208963321	HG4_Ill_SVrefine2DISCOVARDovetail_1989	G	GTGGGTGGCTCCTCTCTGCCGGCAGATCATCCTGATGAGTGTTCAGCTCTCAGCAGAGAGGAGGCCCTGGAGAGGGTGGCTCCTTTCTGCAGGTGGTCATCCTGACATCTTCTCTGCTCTGGCAGAATGGTACAATCTTGGGTTTTATGCACTTCAGTGGGGAAGTGCATACTGATTGGTGCACGGGCAGCCATGGGCTGGCCCAGGCAAAAGCACCATGAGCTCTCCCTCCAGTCTGCAGGACTGGCAGCCTGCCCTCCAGGCTTCAGCCCTTCTTTGGACTGAAGGTGGGGCATCACTCAGGACCCATTCCCTTCCTCCCAGGAGCCTGTCTGCCTCCCGCCGCCATTCATGGAGTGTAGGCTGTTTGTGCCGAGTGCCTGCAGGCCAGTGCTGAGCTGCCCTCAGCCCCTCCTCAGCTTCCCTCCTATGCTAATCGGTGCCCAAAGCCCGGAGGGGGCCAAGGTGGCAGGGAACTGGCATGTCAGCATTGCCCGGAGTGTGTGCCCACCCTGCTGGGCTGCGACAGCACCCAGGCTCAGCTTCAATCTTGCTCCATGATCGGAGCAGGTGTTGGGAGTGGGGAGAGGCCAGACAGTGGGAACAGGCACTTCCAAGCCTGTAGGGGGTAGAGGGGCCTTCCTGGGGCCCCAAAAGCACAGAGACACTGGGGTCTACAGTCACAGCAGGGCAACTGCAGTGGCACCTGGGGAGGACAGGGCTTCCGCCTGTTCTGTGGAGTGGGAGGCCCAGGTCCATCTCCCTGTTGCAGCCAGAGTCTTGGCAGCGGCCACTCTAGATGGGCTGCTACTACCATCAGTGGCATGTGCCTGTGGTCCCAGCTACTTGGGAGGCTGACGTGGAAGGATCGCTTGAGCCCAGGGGGTCGAGGCTGCAGTGAGCCATGATCATGCTTCTGCAGTCTTCCAGCCTGGACAACAGAGCAAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAGAATTTCAGTATTTTCCTGTGGAATAAAACCTCAGAGGAGAGTCATCTGAACATTCCATTAGATTTTATCTCTAAAATTATAGTGATGTGTATTATAGCTCATGGAGAATGTTTTGTTTGTTTGAGCTAATAGAGGTATTAAAATTGATAGCCTCAACAATGAGGAAGGGAGTAGAAAAGTGACCCCTTCCTACTGTGTCACCATTTTTTAAAAGCTTCCTGGAGAGTAGCAGTTACAATGAATCCTCACCAGCCCTGGACAAGCTGAGATATGGCAGTTTAAATAGTTTGAGTGTCTGTCATTAAGAACACCACTGGGTTGGTGCCTGTATCTGCTGTACCTACCTCCTAGTTTTTTTTTTTTTAAGCTTTTATTTTTGAGATGGAGTCTCACTCTGTTGCCCAGGGTGTAGTGCAGTGGTACAATCTCAGCTCACTGCAACCTCTGATTTTCTGGCTCAAGCAGTTCTCCTGCCTCAGCCTCTAGGTAGCTGGGATTACAGGCACCCACCACAGTGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACATGTTGGCAAGGCTGGTCATGAACTCCCGACCTCAGGTGATTCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCACAGCCCCTTTTTAAGCATTTTCTTACTTCCTGGAACCACAAGATATTCCAGACTCATCCTGTAGTTCCTCTGCCCCAGCCCTGGAATTAAATGCTTCTGCTAGAAGCTCTAGTTCCTCTTATTGCAGACCAAGATCTGAGTACTAGGTGTGTACTTATTTCCTAAAATGTCGTTACTTCTAGGCCTTCTCAGCAGACGGAGCTACAAAATATATGTATGTCTAACTCATACTGCTCCTTGTGGAGCAGGACTACCCTACAGTTAGTACAGGGTACTATCTATCTGTCTGTCTGTCTGACTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCATCTATCAATCATCTATCTATCTATCAATCATCTATCTATCTATCTATCTGATATGGTTTGGCTGTGTCCCCACACAAATCTCATCTTGAATTGTAGCTCCCCTAACTCCCATGTGTCATGGGAAGGACCCAGTGAGAAGGGAAGTAATTGGATCACAGGGCGGGTCTTTCCCGTGATGTCCTCATGATAGTGAATAAGTCTCACAAGATCTGATGGTTTTATAAAGGGGAGTTCCTCTGCATAAGCTGTCTTGCCTGCCACCATGTAAGACGTGCCTTTCTCCCCCTCTGCCTTCCTCCATGGCCTTGTAGCCATGTGGAACTGTGAGTCAGTTAAACCCCTTTCCTTTATAAAATACCCAGTCTTGGGTATGTTGGGTATGTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCACCCAGACTGGAGTGCAGTGGCATGATCTCATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTTAAGCAATTCTCTGCCTCAACCTCCCAAGTAGCCAGGCTTACAGGTGCATGCCACCACACCAGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGTTTATAGGCGTGAGCCACTGAACCCAGCTGGGTATGTCTTTATTAGCAGCATGAGAACAAATGAATACTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTAAAATGGGTTTTATATGGATAACTCTGATTTTGGTCTAGTACTGCAGGGTTCATTTAGCTTTCCTTCTTTTCATATATGTATATATTCCTGTTCATATTTACAGATGGACAATACATTACAGAAGAATGGCTTTATTTGAGTAACCCCGAGAACTTGGAAGCATTGTTGTTCTCATCTGCCTGTTCAGGAATCCTCTTATAGCAGATATCTATTACCTTTTTTGGCCCAATGTCTCTTCTATCTGAGAGCAGCTCCTCCACAGGTGGTTCTAGCAATCACAAGACCCACTCTCCCCAACACAGGTGGGCATGTGACTGAGGCTGGCCAGTGAGAGTACACCATCCTCAAAATTCAAGGTGGCAGCTCACCCCGGCAAGACAAACAGAAGTCCCTGGAGACCTGATTCAGTTGTTCAGGGAGAGAGACAGAGAGTTTGAACACTAGTGAGCCAGTTGTTCTCGGGTTTCTGTGGACTATCTCGTTGGGGAAGCCTGTTTAAGAATGAAGCCCACATAGAGGAAGGCATGTCATTGAACCCTGGAATCCATTTCTGCATGACAACAGCTGTGACTTCCTAGTTCTGTAAGTCAGTTAATCCTTTTTCAGTTTAAAATTTTTCTTTTTTTTCTAGACAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCAGCCCACTGCAACCTCCACCTCCCAGGCTCAATCAAGCCAATCCTTCCACCTCAGCCTCCCAAGCAGCTGGGACCACAGGTGTGTGCCACCACACCCAGCTAATTTTTTGTATTTCTTGTAGAGACAGGGTTTTGCTATGCTGGCCAGGCTGGTCTTGAACGCCTGAGCTCAAGTGATCTGATTGCCTCGGCTTCCAGAAGTGCTGGGATTACAAGCTTGAGTCACCATGCCTGGTCCAGTTTAAACTTTTTTGATCGAGCATCTGTCACTTGCAATCAAATGAATCAAATACATCTCCTTAGAATCATATAAACAAACCCCGTGAATAAGAAGAGACCTCATAGTTAAGCTCAGCCCACATCCATACAGAAATCCTCTTTATTGTTCGTGAATGACTAAGCACCTCATTGAATAGGAAGTTCGCTACTGGGTAAGGCAGCCCATTACATTGCTGGATACTTCCAGCTGCCTTAAAGCCTTTTAAAATGCTGAGCCCCATATCAGACTCCCACGAATTACACCCATTGGTATTAATTCTGTATTGCGCTCACACAGAAAATTAGTCCAGGCTCTTTTTCACATGGTAGCCTTTTAAATATATAAAAATACTAACTTTTTCTTTTCCAGTCTCAATGGACTTAGTTTCTTCAACTGCTCTTAGGAGAGAGTTTTTAGATTCTTTACAATCCTAGTGTCCTTTTTAGAAGATAAGACATTTTAGTAATGATCCCTTTACAATGTATTGCCTAGGATTGAGTAATTTGTTTAACTAGTTTGGAGCACAGTAGACTTATTTTTTGTATTCTAGTTACTATAGGTTTATAAATATACTTATTTTTTATTTTTGAGATGGAGTTTTGCTCTCGTTGCCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACCACAAACTCCGCCTCCCATGTTCAAGTGATTCTCCTACCTCAGCCTCCCAAGTAGCTGGGATTACAGGCAGGCACCACCACACCCAGCTAATTTTGTATTTTTAGAAGAGGCAGGGTTTCTCCACGTTGGTCAGGCTGATCTCGAACTCCCGACCTCAGGTGATCTGCCCACCTTGGCCTCCCAAAGTACTGGCATTACAGACGTGAGCCACAGCGTCCAGCCAGGTTTATAAATATAATTATATTATGTTTAGGCAAGCTGCCTCATACCTAAGACACCCTTCTTTAAGCTTTGCACCTCATGATAATTTTTTAAAAGCCCCAAGTACAAAATGCAACTCTTAGGACATTAAAAAGATAATACAATGTAACAATAACAGTTAATATGTATGTGTGTATTTATTTTTATTTTTTAGAGACCAGGTCTCACTATGTTGCCCAGGCTGGTTGTGAACTCCTGGGCTCAAGTGATCCTCCTGCTTCAGCCTCCTGAGTAGCTGGGCCTGCAGGTGCAGACCACTGCACCCGGCTAACAGCTAACATTTAGTGAGTTACTATATGCCAAGCATTTTATAGCATTATATATTATATACTATTGTTTACATCTCACAAAACCCTGTAAAGTGGGTTCTATTACTATCCCCATTAGATGAAAAAACTGCAGCTTAGAGAGGTTAAGTAGCTTCTCTGATTTTTCACAAGATCCTGGAAAGCTAGGATCCAAGTTTGACTTCAGACTGGGTTGTTTATTCATTAAAGTCTTGAGAATGCAGAGGCAATGCCTTCAACAGAAAATCAGCTAGATGATTATAGTAAACAGTAACTGTGACAACAGAAGTATTTAACACATTTTAATGATCATTTATGGGAAATTGTTGCTGCTGCTGCTTCTTTTTTATTTTTTATTATTTTATTTTATTTTATTTTTTGAGATGGAGTCTCACTCTGTCGCCCAGGTTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGTTCCGCCTCTTGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGACTAGAGGCGCCTGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACTGTGTTAGCCAAGATGGTCTTGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCTGCTGCTGCTTCTTAAGTGCAAAATAGTGTATTTTGAATCCTATAATGAAGGATGAGGGAAGAGTTAAAAATTTTTAAATAGAGCCTGATTAGATACATATTAAAGAGGAAGAGTTGTGAAGAACACAAGAGCATTATGCCAGGCGTGGTGGCTCACAACTGTAATCCAAGCACTTTGGGAGGTCGAGGCGGGTGGATCACAAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATAGTGAAACCCCATCTCTAGTAAAAATACAAAAATTAATGGTGGGGGGTGCCTATAATCCCAGCACTTTGGGAAGTCGAGGTGGGCGGATCACAAGGTCAAGAGACCAGCCAGGCCAATATAGTGAAACTCTATCTCCACTAGAAATACAAAAATTAGCTGAGCGTGGTGGTGGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATGGTGCCACTGCACTCCAGTCTGGGTGACAGAGTGAGACTCCATCTCAACAACAACAACAACAAAAAAAAAGCATTACAAAGTAGGTGGAAAAGTTAACTGCAGGACATAAAAATCATGAAGAAAAATCTGAAACATGGGGAACGGAGTGGTCTCTGTGGAGAGCCTGATGATGAGACTTAGCTGAGAATAGATGAGTTTAATTTTATGGAAAGAAAAAATAATAAGGTAAGATAAGGTTTATCTTATTTTCCAAGCCAGAACCCTGAAAGGGTGAGGTAGGTGGCCACAAAGTCAGAGTGAGTAGGAGAGGGTAGGTTTTTTTTTAAATTTTAATTTTTAAAATTTTTTGGGTACATAGTAGGTATATATATTTAA	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_1971:HG3_PB_pbsv_2616:HG2_PB_pbsv_2630:HG4_PB_pbsv_2631:HG2_PB_SVrefine2Falcon2Bionano_1120:HG2_Ill_breakscan11_3253:HG2_PB_PB10Xdip_16845:HG4_PB_SVrefine2PBcRDovetail_1394:HG2_PB_SVrefine2Falcon1plusDovetail_6590:HG3_PB_SVrefine2Falcon1Dovetail_1638:HG4_PB_SVrefine2Falcon1Dovetail_1586:HG2_Ill_SVrefine2DISCOVARplusDovetail_7219:HG4_Ill_SVrefine2DISCOVARDovetail_1989:HG2_PB_SVrefine2PB10Xhap12_1968:HG2_10X_SVrefine210Xhap12_2019:HG2_PB_SVrefine2PBcRplusDovetail_6112;NumClusterSVs=16;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_1989;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0395859;ClusterMaxSizeDiff=0.0392814;ClusterMaxEditDist=0.191298;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=6465;DistBack=4197;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=2:208963322-208963326;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9971;PctRecOverlap=0.9972;SizeDiff=19;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3019.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:89:1/1:0:19:0:24:1/1:0:8:0:10:1/1:0:43:1/1:0:736:.:6162:.
chr2	210260739	HG2_Ill_GATKHCSBGrefine_1764	T	TAAAACATTATAACTAGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCAATCCGGCCTAGGCTAAAGAGCGGGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_5060:HG3_PB_assemblyticsfalcon_14697:HG2_PB_assemblyticsfalcon_14699:HG2_PB_pbsv_2636:HG3_PB_SVrefine2Falcon1Dovetail_1646:HG3_PB_pbsv_2623:HG4_PB_SVrefine2Falcon1Dovetail_1593:HG2_Ill_MetaSV_2750:HG2_Ill_GATKHCSBGrefine_1764:HG2_PB_SVrefine2Falcon1plusDovetail_6595:HG3_Ill_MetaSV_2887;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1764:HG2_Ill_MetaSV_2750;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0650155;ClusterMaxSizeDiff=0.0619195;ClusterMaxEditDist=0.223565;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=12897;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:210260740-210260754;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3020.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:47:0|1:52:0:1:36:./.:0:3:23:0:0/1:29:6:0/1:9:33:.:.:.
chr2	210300722	HG2_Ill_Krunchall_3689	T	TAATATATACAGTATATATTATATATAATATATACAGTATATATTATATATA	20	PASS	ClusterIDs=HG2_PB_HySA_5061:HG2_PB_HySA_5062:HG4_PB_pbsv_2638:HG4_Ill_GATKHC_4418:HG4_Ill_GATKHCSBGrefine_1841:HG4_Ill_250bpfermikitraw_3644:HG2_Ill_Krunchall_3689:HG2_Ill_GATKHC_4356:HG2_Ill_GATKHCSBGrefine_1765:HG2_Ill_250bpfermikitraw_3623:HG2_Ill_150bpfermikitraw_3365:HG2_PB_pbsv_2637;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3365:HG2_Ill_250bpfermikitraw_3623:HG2_Ill_GATKHCSBGrefine_1765:HG2_Ill_GATKHC_4356:HG2_Ill_Krunchall_3689:HG4_Ill_250bpfermikitraw_3644:HG4_Ill_GATKHCSBGrefine_1841:HG4_Ill_GATKHC_4418;NumExactMatchSVs=8;ClusterMaxShiftDist=0.110092;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.242991;PBcalls=4;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=-18;DistForward=30453;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=2:210300721-210300724;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3021.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:29:1|0:5:23:40:3:./.:13:2:4:10:0/1:19:26:./.:.:.:.:.:.
chr2	210821029	HG3_Ill_svaba_3395	A	AATTCCCTAATTTCTAATTTCTCCACATTCCTAGTTTCTTTATCTTATGACAAAAGAAATTTAACAATTATATAAGTAGTATTACATAAATATATCACAAGTGCATTAGTTTTAACTGTTGTATAACACATTACTACAAACTTAGAGCCTTTAAACAAAACCCATTTATTATCTCACAGTTGTGTAGGCCAGGAGTCCAGGTAGGCTCAGCTGG	20	PASS	ClusterIDs=HG4_PB_pbsv_2642:HG2_PB_PB10Xdip_16851:HG2_PB_pbsv_2640:HG3_PB_assemblyticsfalcon_14703:HG2_PB_assemblyticsfalcon_14705:HG2_Ill_breakscan11_3254:HG4_PB_HySA_4014:HG2_PB_HySA_5069:HG4_PB_SVrefine2PBcRDovetail_1401:HG4_PB_SVrefine2Falcon1Dovetail_1596:HG4_Ill_svaba_3373:HG4_Ill_manta_653:HG4_Ill_SVrefine2DISCOVARDovetail_1997:HG4_Ill_MetaSV_2835:HG4_Ill_GATKHCSBGrefine_1843:HG4_Ill_Cortex_1987:HG3_PB_SVrefine2PBcRDovetail_1318:HG3_PB_SVrefine2Falcon1Dovetail_1648:HG3_Ill_svaba_3395:HG3_Ill_manta_605:HG3_Ill_SVrefine2DISCOVARDovetail_1977:HG3_Ill_MetaSV_2888:HG3_Ill_GATKHCSBGrefine_1784:HG3_Ill_Cortex_2029:HG2_PB_SVrefine2PBcRplusDovetail_6117:HG2_PB_SVrefine2PB10Xhap12_1976:HG2_PB_SVrefine2Falcon2Bionano_1125:HG2_PB_SVrefine2Falcon1plusDovetail_6598:HG2_Ill_svaba_3281:HG2_Ill_manta_761:HG2_Ill_SVrefine2DISCOVARplusDovetail_7228:HG2_Ill_MetaSV_2751:HG2_Ill_GATKHCSBGrefine_1767:HG2_Ill_Cortex_4697:HG2_10X_SVrefine210Xhap12_2024:HG3_PB_pbsv_2627;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2024:HG2_Ill_Cortex_4697:HG2_Ill_GATKHCSBGrefine_1767:HG2_Ill_MetaSV_2751:HG2_Ill_SVrefine2DISCOVARplusDovetail_7228:HG2_Ill_manta_761:HG2_Ill_svaba_3281:HG2_PB_SVrefine2Falcon1plusDovetail_6598:HG2_PB_SVrefine2Falcon2Bionano_1125:HG2_PB_SVrefine2PB10Xhap12_1976:HG2_PB_SVrefine2PBcRplusDovetail_6117:HG3_Ill_Cortex_2029:HG3_Ill_GATKHCSBGrefine_1784:HG3_Ill_MetaSV_2888:HG3_Ill_SVrefine2DISCOVARDovetail_1977:HG3_Ill_manta_605:HG3_Ill_svaba_3395:HG3_PB_SVrefine2Falcon1Dovetail_1648:HG3_PB_SVrefine2PBcRDovetail_1318:HG4_Ill_Cortex_1987:HG4_Ill_GATKHCSBGrefine_1843:HG4_Ill_MetaSV_2835:HG4_Ill_SVrefine2DISCOVARDovetail_1997:HG4_Ill_manta_653:HG4_Ill_svaba_3373:HG4_PB_SVrefine2Falcon1Dovetail_1596:HG4_PB_SVrefine2PBcRDovetail_1401;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0691244;ClusterMaxSizeDiff=0.0691244;ClusterMaxEditDist=0.211712;PBcalls=16;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=213;DistBack=552;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=2:210821030-210821033;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3022.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:62:1/1:3:38:0:17:1/1:0:33:1:23:1/1:0:28:./.:.:.:.:.:.
chr2	211917116	HG3_Ill_GATKHCSBGrefine_1790	C	CTTATGTATAATTATATATACTGATATATAATTATACATAATTATATATATCAATTATATATAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16852:HG3_PB_pbsv_2632:HG2_PB_HySA_5086:HG4_Ill_GATKHCSBGrefine_1850:HG2_PB_pbsv_2646:HG4_Ill_250bpfermikitraw_3664:HG3_Ill_GATKHC_4511:HG3_Ill_GATKHCSBGrefine_1790:HG3_Ill_250bpfermikitraw_3584:HG2_Ill_GATKHC_4370:HG2_Ill_GATKHCSBGrefine_1774;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1774:HG2_Ill_GATKHC_4370:HG3_Ill_250bpfermikitraw_3584:HG3_Ill_GATKHCSBGrefine_1790:HG3_Ill_GATKHC_4511:HG4_Ill_250bpfermikitraw_3664:HG4_Ill_GATKHCSBGrefine_1850;NumExactMatchSVs=7;ClusterMaxShiftDist=0.124031;ClusterMaxSizeDiff=0.0923077;ClusterMaxEditDist=0.266667;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=63;DistBack=-98;DistForward=11;DistMin=-98;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=83;REFWIDENED=2:211917115-211917200;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3023.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:35:./.:19:8:15:19:./.:2:6:7:1:./.:14:1:./.:.:.:.:.:.
chr2	212082195	HG2_PB_SVrefine2PBcRplusDovetail_6121	C	CTGCATAATGAAAGCAAGACTATGCAAAAAGAACAATTTGGAGGCATCACGTTACCTAAAACTAAAAACTATACTATAAGGCCATAGTCACCAAAACAGCATGGTACTGGTATAAAAATAGGCACATAGACCAATGGAACAGAATAGGGAACCAAGGAATAAAGCCAAATACTTACAGTCAACTGATCTTTGACAAAGCAAACAAAAACATAAAGTGGGGAAAGGACACCCTATTCAACAAATGGTGCTGAGATAATTGGCAAGCAACATGTAGGAGAATGAAGCTGGATCCTCACCTCTCAACCTATACAAAAATCAACTCAAGATGGAAAAAAGACATAAATTTAATACCTGAAACCATAAAAATTCTAGAAGATACTATTGCAAAACCCTTCCAAATATTGGCTTAGGCAAAGACTTCATGACCAAAAACCTAAAAGCAAATGCAATGAAAACAAAGATAAATAGATGGGACTTAATTAAACTAAAAAGCTTCTGCTTAGCAAAAGAAACAATCAGCAGAGTAAACAGACGACCTATGAGTGAGAGAAAATTTTTGTAATCTATACATCTGATAAAGGACTAATATCTAGAATCTACAAGGAACTCAAACATATCAGCAAAATAAAAACAATCCCATCGAACAGTGGGCTAAGGACATGTATAGACAATTTTCAAACATAGATATACAAATGGCCAACAAACATATGAAAAAAATGCTCAACATCACTAATGATCAAGGAAATGCAAATAAAACCACGATGTGATACCATCTTACTCCTGCAAGAATGGCCATTATCAAAAAATCAAAAAATAATAGATGTTGGCAGGGATGTGTTGAAAAGGGAACACTTTTACACTGTTGGTGGGAATGTAAACTAGTAAAACCACTATGGAAACAGTGTGGAGATTCCTTAAAGAACTAAATGTTGAACTACCATTTGATCCAGCAATCTCACTACTAGGTTTCTACCCAGAGGAAAACAAGTCATTATACGAAAAAGACACTTGCACACCCATGTTTAATCAGCACAATTAGCAACTGCAAAAACATGTAACCAGCCCAAATGCGCATCAATCAATGCGTGGATAAAGAATTTGTGTGTGTGTGTGTGTGTGTATATATATATA	20	PASS	ClusterIDs=HG2_PB_HySA_5090:HG4_PB_pbsv_2649:HG2_PB_pbsv_2649:HG4_Ill_MetaSV_2836:HG2_Ill_MetaSV_2752:HG3_Ill_MetaSV_2889:HG4_PB_HySA_4033:HG4_PB_HySA_4032:HG2_PB_HySA_5091:HG3_PB_SVrefine2Falcon1Dovetail_1651:HG2_10X_SVrefine210Xhap12_2029:HG4_PB_SVrefine2PBcRDovetail_1405:HG2_PB_SVrefine2PBcRplusDovetail_6121:HG2_PB_SVrefine2Falcon2Bionano_1129:HG2_PB_SVrefine2Falcon1plusDovetail_6602:HG4_PB_SVrefine2Falcon1Dovetail_1601;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6602:HG2_PB_SVrefine2Falcon2Bionano_1129:HG2_PB_SVrefine2PBcRplusDovetail_6121:HG4_PB_SVrefine2PBcRDovetail_1405;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0525636;ClusterMaxSizeDiff=0.0525636;ClusterMaxEditDist=0.123259;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=1130;DistBack=76514;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=361;REFWIDENED=2:212082196-212082556;PctSeqSimilarity=0.996;PctSizeSimilarity=0.9895;PctRecOverlap=0.6815;SizeDiff=-12;StartDistance=-358;EndDistance=-358;GTMatch=0;TruScore=88;MatchId=3024.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:98:./.:0:5:0:3:1/1:0:12:0:10:1/1:0:13:0/1:22:120:.:1177:.
chr2	212925312	HG3_PB_SVrefine2Falcon1Dovetail_1655	T	TAAGAGTATGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_HySA_4148:HG3_PB_pbsv_2638:HG2_PB_HySA_5098:HG2_PB_assemblyticsfalcon_14722:HG2_PB_HySA_5097:HG2_PB_SVrefine2Falcon2Bionano_1131:HG3_PB_SVrefine2PBcRDovetail_1324:HG2_PB_SVrefine2Falcon1plusDovetail_6604:HG3_PB_SVrefine2Falcon1Dovetail_1655:HG4_PB_SVrefine2Falcon1Dovetail_1604:HG2_PB_pbsv_2651;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1655;NumExactMatchSVs=1;ClusterMaxShiftDist=0.109204;ClusterMaxSizeDiff=0.109204;ClusterMaxEditDist=0.184087;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=327;DistBack=51528;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=2:212925313-212925324;PctSeqSimilarity=0.9894;PctSizeSimilarity=0.979;PctRecOverlap=0.9761;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3025.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:43:0|1:28:0:1:38:./.:0:4:19:1:0/1:25:12:0/1:8:35:.:.:.
chr2	213195782	HG2_Ill_GATKHC_4388	G	GTATATATATATATATATATATATACACATATATATATATATATATACACGTATATATATATATATATATATATATACACGTATATATATATATATA	20	PASS	ClusterIDs=HG2_PB_HySA_5101:HG3_PB_pbsv_2639:HG2_PB_pbsv_2652:HG4_PB_pbsv_2653:HG4_PB_HySA_4045:HG2_Ill_breakscan11_3255:HG4_Ill_SVrefine2DISCOVARDovetail_2001:HG4_Ill_GATKHC_4454:HG4_Ill_GATKHCSBGrefine_1859:HG4_Ill_150bpfermikitraw_3553:HG3_Ill_Spiral_2893:HG4_PB_SVrefine2Falcon1Dovetail_1605:HG3_PB_SVrefine2Falcon1Dovetail_1656:HG3_PB_SVrefine2PBcRDovetail_1325:HG3_Ill_SVrefine2DISCOVARDovetail_1987:HG3_Ill_GATKHCSBGrefine_1800:HG2_PB_SVrefine2Falcon2Bionano_1132:HG2_Ill_SVrefine2DISCOVARplusDovetail_7240:HG2_Ill_GATKHC_4388:HG2_Ill_GATKHCSBGrefine_1782:HG3_PB_HySA_4153;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1782:HG2_Ill_GATKHC_4388:HG2_Ill_SVrefine2DISCOVARplusDovetail_7240:HG2_PB_SVrefine2Falcon2Bionano_1132:HG3_Ill_GATKHCSBGrefine_1800:HG3_Ill_SVrefine2DISCOVARDovetail_1987:HG3_PB_SVrefine2PBcRDovetail_1325;NumExactMatchSVs=7;ClusterMaxShiftDist=0.165854;ClusterMaxSizeDiff=0.165854;ClusterMaxEditDist=0.206897;PBcalls=10;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=96;DistBack=10542;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=24;REFWIDENED=2:213195783-213195806;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3026.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:45:0|1:44:3:1:35:./.:1:8:23:2:0/1:28:10:./.:.:.:.:.:.
chr2	213977066	HG3_Ill_GATKHCSBGrefine_1803	T	TAAAAAATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCACCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGTCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_4157:HG2_PB_SVrefine2PB10Xhap12_1982:HG2_PB_PB10Xdip_16854:HG2_PB_assemblyticsfalcon_14730:HG2_PB_pbsv_2657:HG2_Ill_MetaSV_2755:HG3_PB_pbsv_2643:HG3_Ill_MetaSV_2892:HG3_Ill_GATKHCSBGrefine_1803:HG2_PB_SVrefine2Falcon2Bionano_1135:HG2_PB_HySA_5107:HG2_Ill_breakscan11_3256;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1135:HG3_Ill_GATKHCSBGrefine_1803:HG3_Ill_MetaSV_2892;NumExactMatchSVs=3;ClusterMaxShiftDist=0.298742;ClusterMaxSizeDiff=0.291994;ClusterMaxEditDist=0.376766;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=344;DistBack=32143;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=2:213977067-213977077;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9942;PctRecOverlap=0.9942;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3027.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:39:1|0:8:26:20:5:1|0:0:6:31:0:0/1:22:17:0/1:12:32:.:.:.
chr2	214171088	HG2_Ill_SVrefine2DISCOVARplusDovetail_7243	T	TATATTTATTAGGTTTTGTTTACTCTTACTTTGCTAGTTCTTTAAAATGACTCAGTAGGTAATTTATTTAAAGTTTTTCTTTATTATTGGTGTAGGCACTTGAAGAGAGCCGGCAAAGGGATCATGACCAACTCAACATTCCAATGGAGGGTATATGATCAAACAGCAAACTGTTTATCATGAATGCAGGATGTGGGCAAACTTATGACTGCGCCTGCCACCAGAAGGTTTGCTGAAGGCAATCACTCCCTGGTGCCGTGCTCGTTGAGGTTATCTACTGGGACGTCTATAGCCTATTGTTTGAAGAATGCAATCTTGCAAGCCTGCTGTAAATCAAACTGCCGACTGATAGTCACCCAACGATCACCTCCTCTTCTTGCTATCTCTTTTACCGAATAAATATGGAGGACTGAAGAAGCTTAGGGCCCTTGTTAACTTGAAGCAAGGAGTCCCCTGACCCTTCTTCCAAATATACTCTTTTGTCTTTGTCTTTATTCCCATGTTTGTCATCCTTTGTTCAGTCCCCCAAGGTCCGTGCAGGTGGCAAAGTGGTGCCCAAACAGGGACTTGAGGACATCGGCAGGCACTTACAGCTAAAAAATTCACCTGTTAGTACGGCTTTCACTGTATTTCGTAGGTTTTGGTATGTTGTGTTTCCATCATCGTTCGTTCCAAGAATTTTTTCAATTTCCTCTTTGCTTTTCTCATTCAGGAGCATATTGTTTAATTTCCATGTGTTTGTATAGTTTCCAAAATTCCTCCTGTTAAACTGATTTTTAATTTTATTGTAGTCAGGGAACATACATGACTCAATTTCAGGGTTTTTTTATTTTTTAAGATTTGTTTTGTGGCCCAATATGCCAGGCCATGTATATCCCAAGGATAGAGATAGTCTGTTCTTGAGAATGATGCATGTGATAAGGAGAAGAATGTGTATTCTGCAGTCATTAGAAGAAATGCTCTGTGAAATAGCTATTTGGTTCTTTTAGTCTGTAGTGCAGATTAAGTCTGATGTGTCTTTGATGATTTTCTGTCCTGATGATATGTCCAGTGCTGAAAGTGGGGTCTTCAAGTTTCCATCTATTATTGTATTGAGGTCCATCTCTCTCTTTAGCTCTAATAATATTTGCTTTATATATCTGGATGCTCCACAGTTGGGTGCGTATATATTTACAACTATTATAACTTCTTGCTGAATTGACCTCTTTATCATTATATAACGACTTTCTTGTCTCTTTTTACAGTTTTTGTCTGAAATCTCTTTTGTCCAATATAAGTATAGCTACTCCTGCCCCTTTTTGGTTTTCATTTGTGTGGAATATCTTTTCCATTCCTTTATTTTCAGTTCTTTATTTTCAGTTTTAGAGGTGCAGTGTGTTTCTTGTAGACAACAGATCATTAGCTCTTAATTTTTCATCCATTCAGTCACTCTATGTCTTTTTATTGGAGGTGGTTTTAGTCCATTTATATTCAGTGTTATTATTGATAAGTAAGGAGGAAGCCCTTGCCATTTTGTTATTTGTTTTCTGGTTGTTTTGTGGTCTTCTCTTCTTAATTCCTGTCTTCCATTTAGTGAAGGTTATTGGTGGTATGATTCAGTTTCTTGCTTTTTATTTTTTGTGTATCTGTTGCATGTTTTTTGATTTGAGGTTACCATGAGGCTTGCAAATACTATTTGATAACTCATTATTTTAAGTTGATGACAACTTAACATTGATTACATAAACAAAAAAAGCAAAGAGAAAACTACTGAAAACTCTCCACTTTAACTTAATCCTTCTACTTTTTAAAGTTTTATTATTTCTATTTATATCTTATTGCACTGTCTATATTTTGACATTGTTGTACTTATTGTTTTTGATCAGTTCATCTTTTAGTCTTTCTATCAAGGTATGAGTAGTTTACATACCACCATTATAATGTTATAATGTTCTGTGTTTGTGTACTTACTATTACCAGTGAGTTCTGTACCTTCAGATGCTTTTTTCTTGTTCATTAACATCCTTTTCTTACAAACTGAAGAACTCCCTTTAGTATTTCTTGTAGGACAGGTCTGGTGTTGATGAAATCCCTTTCCTTTTGTTTGCCTGGGAGAATCTTTATTTTTCCTTCATGGATATTTGAGGTTTGATGGATAATTTCATTGGATATACTATTTTAGGATACAAGTTTTTTTTTTCCGTCATAACTTTAAACATGCCATACCATTGTCTCTTATCCTGTAAGGTTTCCACTGAAAAGTCTGCTGCCAGATATATTGGAGCTATATATGTTGTTTCTTTTCTCTTGCTGCTTTTAAGATCCTTTCTTTATTAGTGACTTTTGGGAATTTGATTATTAAATGCTTTGAGGGAGTCTAATTTGGGTTAAAACTGCTTGGTGTTCTCTAATCTTTTTGCACTTGAATACTGATATTTTTTCTAGGTTTGGTATGTTCTCTGATATTATCCCTTTGAATAAACTTTCTACCCCTATGTCTTTCTCTACCTCCTGTTTGCCTCCTGTTTACCTTCCTCCCTCTTACTCCATCCATGCCTCTACCTCCTCTTTAAGGCCAATAACTCTTAGATTTGCCCTTTTGAGGCTATTTTTTTAGATCTCATAGGCATGCTTCATTCTGTTTTACTCTTTTTTTCTTTCTCTGACTGTATTTTCAAATAGCCCGTCTTCAGGCTCACTAATACTTTCTTCTGCTTGATCAATTCTGTTGGCAGGAGGCTCTTATGCATTCTTCAGTTTGTCAGTTGAATTTTCAACTCCAGAATTTCCGCTTGATTCTTTTTAACTTTTTTCAGTCTGTTCATTAAATTTTTCTGGTAGGATTCTTAATTCCTTCTCTGTGTTATCTTGAATTTCTTTGAGTTTCCACAAAACAACTGTTTTGAATTATCTGTCTGAAAGGTTGCACATTTCTCTTTGGTGAGGTCATGTTGTCCTGGATGGAAATGCTGTGGATGCTTGGATGCTTGTGGATGTTCATCATTGTCTAGGTATTGAACAGTTAGGTATTTTATTGTAATCTTCACGTTCTGGGCTACCCATCCTTCTTGGGAAGGCATTCCAGGTATTTGAGGGGACTTGGGTGTTATGATCTAAGTTCTTGGTCACTGCAGCTGTATCTTCATTAGGGGGCACTCCAATCTCAATAATGTTGTGGCTTTTGTAGTCTTATAGAGGTACTGGCTAAGTTGTCTTGGATAAGATTAGGAAGAATTCTCTAGATTACCAGGTACAGACTTTTCCTTTACTTCCCCCCAAACCATGAGTGTTTCCCTCTCTGTGTAGAGCTGCCTGGAGCTGGAGCAGGGTTGATAGAAGCCACCCCTGTGGTCACTACCACTGAGACTGTGCTGGGTCTGACCTGAAGCCAGCACAGCACAGAGTCTTTCCCAAGGCCCATTCACTGTAAATCACTGCCTGGGTAACACCTATGTTCACTCAAGGCCCTAAGGCTCTACAATCAGCAGGTGGCCAGGCTTGTGTTCTTTCCTTCAGAGTGGCAAATTTCCCCTAGCCTAGGTGCATTCAGAGATGCTGTCTAGGAGCCAGGGCCTGGATTTGGAAATCTTAAGAATCTACCTGGTGCTCTATTCTACTACAGCTGAGCTAGCTCGCACCCCTGAAGACAAAGTCCTTCCTACTCTCCCCTTTCCACAATCAGGGAAGTCTACCACCAGCCTAGGCCCATTGCAAATACAGCCTGGCTACCACCAATGTTCACTCAAGGGCCAAGGACTCCTCAGTCAGCTTGAGGTTGATGCTGCCAAACCTGGAACTCTCCCTTCGGGGCAGTAGTCTGCCCTCTGGCCCAGGGCAGGTCCAGAAATTCCATTTGAGTGCAAAGGCCTGGATTCAAGGACCTCAATGGGCCTGACTGGTGTTCTACCCAACTAGGGCCAAGCTGCTACTTAATCTGCAAAAGCAAGTCTCCTTTACTCTTTCATTTCTTTTTCTCAAGCAGAAAGAATCTCTTCCCATAGCCACCACACCTCTCTGTATGTGCTAGGTCACACCTGAAGCCGGCATGTCTCTGAGTCTCATTCAGGACCCACAGCAAGTAGTGCCTGGCTACTGATGCTGATTATTTAGGACCCAAGGGCTCTTTAGTCAGCAGGTCATAAATCCTGCCAGGACTGGGTTCTTCCTTTGAAGGCAGTGGGTTCTCTTTTGGCTCAGGGAGTTTCTAGAAATGTTGTCTGGGAGCTAGGGCCTAGAATGGGGGCCTCAGGACTCTGCCCAGTGCCCTACCCTACTGTTGCTGAGCTGGTATCCAAATTGCAAGACAAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3257:HG2_PB_pbsv_2658:HG4_PB_pbsv_2658:HG3_PB_pbsv_2644:HG4_PB_HySA_4053:HG3_PB_SVrefine2Falcon1Dovetail_1659:HG2_PB_SVrefine2Falcon1plusDovetail_6607:HG4_PB_SVrefine2PBcRDovetail_1409:HG3_Ill_SVrefine2DISCOVARDovetail_1992:HG2_PB_SVrefine2Falcon2Bionano_1136:HG2_Ill_SVrefine2DISCOVARplusDovetail_7243:HG2_10X_SVrefine210Xhap12_2033:HG4_PB_SVrefine2Falcon1Dovetail_1608:HG2_PB_SVrefine2Falcon1plusDovetail_6608:HG3_PB_SVrefine2PBcRDovetail_1328:HG4_Ill_SVrefine2DISCOVARDovetail_2004:HG2_PB_SVrefine2PBcRplusDovetail_6127:HG2_PB_SVrefine2PB10Xhap12_1983:HG2_PB_PB10Xdip_16855;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2033:HG2_Ill_SVrefine2DISCOVARplusDovetail_7243:HG2_PB_SVrefine2Falcon2Bionano_1136:HG3_Ill_SVrefine2DISCOVARDovetail_1992:HG4_PB_SVrefine2PBcRDovetail_1409;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0915775;ClusterMaxSizeDiff=0.0913547;ClusterMaxEditDist=0.189435;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=4287;DistBack=-1;DistForward=3954;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=2:214171089-214171088;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3028.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:141:1/1:0:25:0:16:1/1:0:9:0:7:1/1:0:56:1/1:1:640:.:4092:.
chr2	215201631	HG2_PB_SVrefine2Falcon2Bionano_1139	T	TAAAGACTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAGTACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_2665:HG3_PB_assemblyticsfalcon_14742:HG3_PB_pbsv_2649:HG2_PB_assemblyticsPBcR_14344:HG2_PB_assemblyticsfalcon_14745:HG4_PB_HySA_4065:HG2_PB_pbsv_2665:HG2_Ill_breakscan11_3258:HG2_PB_PB10Xdip_16860:HG4_PB_SVrefine2Falcon1Dovetail_1615:HG3_Ill_SVrefine2DISCOVARDovetail_1998:HG3_PB_SVrefine2PBcRDovetail_1330:HG3_PB_SVrefine2Falcon1Dovetail_1664:HG2_PB_SVrefine2PBcRplusDovetail_6131:HG2_PB_SVrefine2PB10Xhap12_1987:HG2_PB_SVrefine2Falcon2Bionano_1139:HG2_Ill_GATKHCSBGrefine_1793:HG4_Ill_GATKHCSBGrefine_1867:HG4_PB_SVrefine2PBcRDovetail_1415:HG2_PB_SVrefine2Falcon1plusDovetail_6614:HG2_10X_SVrefine210Xhap12_2040:HG2_PB_HySA_5122:HG3_PB_HySA_4172;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1793:HG2_PB_SVrefine2Falcon2Bionano_1139:HG2_PB_SVrefine2PB10Xhap12_1987;NumExactMatchSVs=3;ClusterMaxShiftDist=0.116766;ClusterMaxSizeDiff=0.116766;ClusterMaxEditDist=0.244541;PBcalls=18;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=330;DistBack=17683;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=2:215201632-215201641;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3029.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:83:1/1:1:24:0:28:1/1:0:5:0:7:1/1:0:32:1/1:1:63:.:.:.
chr2	215700055	HG2_PB_SVrefine2PBcRplusDovetail_6133	A	ACCTCCCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGGCGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGCACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCCGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1665:HG4_PB_pbsv_2666:HG3_PB_SVrefine2PBcRDovetail_1332:HG2_PB_pbsv_2667:HG2_PB_SVrefine2PBcRplusDovetail_6133:HG3_PB_pbsv_2651:HG2_PB_SVrefine2PB10Xhap12_1990:HG2_PB_SVrefine2Falcon2Bionano_1141:HG4_PB_SVrefine2Falcon1Dovetail_1617:HG2_PB_SVrefine2Falcon1plusDovetail_6615:HG4_PB_SVrefine2PBcRDovetail_1416;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1141:HG2_PB_SVrefine2PB10Xhap12_1990:HG2_PB_SVrefine2PBcRplusDovetail_6133:HG3_PB_SVrefine2PBcRDovetail_1332;NumExactMatchSVs=4;ClusterMaxShiftDist=0.091442;ClusterMaxSizeDiff=0.0790698;ClusterMaxEditDist=0.22577;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=427;DistBack=67041;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=171;REFWIDENED=2:215700056-215700226;PctSeqSimilarity=0.9935;PctSizeSimilarity=0.993;PctRecOverlap=0.9234;SizeDiff=-3;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=96;MatchId=3030.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:1:33:1:18:./.:0:1:0:0:./.:0:1:1/1:2:38:.:.:.
chr2	217091288	HG2_PB_SVrefine2PB10Xhap12_1994	AC	GGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGTTGACCCCCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGCCGGGGCGGCTGGCCAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1335:HG3_PB_SVrefine2Falcon1Dovetail_1669:HG3_PB_assemblyticsfalcon_14764:HG2_PB_assemblyticsfalcon_14767:HG2_PB_SVrefine2Falcon1plusDovetail_6619:HG2_PB_assemblyticsPBcR_14363:HG2_PB_SVrefine2PBcRplusDovetail_6136:HG2_PB_SVrefine2PB10Xhap12_1994:HG2_PB_SVrefine2Falcon2Bionano_1146:HG4_PB_SVrefine2Falcon1Dovetail_1620:HG2_PB_pbsv_2674:HG3_PB_pbsv_2656:HG4_PB_pbsv_2675:HG2_PB_HySA_5149;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1994:HG2_PB_SVrefine2PBcRplusDovetail_6136:HG2_PB_assemblyticsPBcR_14363;NumExactMatchSVs=3;ClusterMaxShiftDist=0.100295;ClusterMaxSizeDiff=0.100295;ClusterMaxEditDist=0.264368;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=174;DistBack=0;DistForward=5;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=480;REFWIDENED=2:217090808-217091287;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9943;PctRecOverlap=0.9034;SizeDiff=-1;StartDistance=16;EndDistance=17;GTMatch=0;TruScore=96;MatchId=3032.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:8:40:1/1:3:20:3:10:./.:1:0:0:1:./.:0:0:./.:.:.:.:.:.
chr2	217676940	HG4_PB_pbsv_2681	A	ACTATATATAATATATAATATTAATTATATATATATATATATATAGTATATATATAAT	20	PASS	ClusterIDs=HG4_PB_HySA_4100:HG2_PB_HySA_5153:HG2_Ill_Krunchall_3765:HG4_PB_pbsv_2681:HG2_PB_SVrefine2Falcon2Bionano_1148:HG2_PB_pbsv_2677;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_2681;NumExactMatchSVs=1;ClusterMaxShiftDist=0.343434;ClusterMaxSizeDiff=0.343434;ClusterMaxEditDist=0.343434;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=3028;DistForward=9472;DistMin=3028;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:217676939-217676941;PctSeqSimilarity=0.9296;PctSizeSimilarity=0.9298;PctRecOverlap=0.7018;SizeDiff=4;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=85;MatchId=3033.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:30:./.:14:19:18:6:./.:10:2:3:0:0/1:21:10:./.:.:.:.:.:.
chr2	218180757	HG2_10X_SVrefine210Xhap12_2050	T	TAAAAGAAAGAGCCTTTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16872:HG3_PB_pbsv_2659:HG3_PB_HySA_4200:HG4_PB_pbsv_2684:HG2_PB_SVrefine2Falcon1plusDovetail_6622:HG2_PB_assemblyticsPBcR_14370:HG3_PB_assemblyticsfalcon_14770:HG4_PB_assemblyticsfalcon_14536:HG4_PB_SVrefine2PBcRDovetail_1421:HG2_PB_SVrefine2PBcRplusDovetail_6139:HG2_PB_SVrefine2PB10Xhap12_1997:HG2_PB_SVrefine2Falcon2Bionano_1150:HG3_PB_SVrefine2PBcRDovetail_1338:HG3_Ill_MetaSV_2898:HG3_Ill_GATKHCSBGrefine_1817:HG2_Ill_MetaSV_2762:HG2_Ill_GATKHCSBGrefine_1804:HG2_10X_SVrefine210Xhap12_2050:HG3_PB_SVrefine2Falcon1Dovetail_1672:HG4_PB_SVrefine2Falcon1Dovetail_1624:HG2_Ill_breakscan11_3260:HG2_PB_pbsv_2679:HG2_PB_HySA_5157:HG4_PB_HySA_4102;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2050:HG2_Ill_GATKHCSBGrefine_1804:HG2_Ill_MetaSV_2762:HG3_Ill_GATKHCSBGrefine_1817:HG3_Ill_MetaSV_2898:HG3_PB_SVrefine2PBcRDovetail_1338;NumExactMatchSVs=6;ClusterMaxShiftDist=0.176282;ClusterMaxSizeDiff=0.176282;ClusterMaxEditDist=0.276074;PBcalls=18;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=306;DistBack=4879;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:218180758-218180772;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3034.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:./.:0:0:0:0:./.:0:5:0:3:1/1:0:32:1/1:2:77:.:.:.
chr2	218513337	HG3_Ill_Krunchall_3796	A	AAGCAGAGTCTTTAAGAAGTGTTTGGCCCGGGCACGGTGGCTCACGCCTGTAATCCTAAC	20	PASS	ClusterIDs=HG3_PB_HySA_4204:HG2_PB_PB10Xdip_16873:HG4_PB_assemblyticsfalcon_14540:HG2_PB_pbsv_2680:HG2_PB_HySA_5162:HG4_Ill_GATKHC_4521:HG4_Ill_GATKHCSBGrefine_1882:HG3_Ill_GATKHC_4583:HG3_Ill_GATKHCSBGrefine_1818:HG2_Ill_GATKHC_4444:HG2_Ill_GATKHCSBGrefine_1805:HG4_Ill_svaba_3444:HG3_PB_assemblyticsfalcon_14774:HG2_PB_assemblyticsPBcR_14375:HG4_Ill_Krunchall_3952:HG4_PB_pbsv_2686:HG4_Ill_250bpfermikitraw_3734:HG3_Ill_svaba_3455:HG3_Ill_Krunchall_3796:HG3_Ill_250bpfermikitraw_3647:HG3_Ill_150bpfermikitraw_3532:HG2_Ill_svaba_3347:HG2_Ill_Krunchall_3775:HG2_Ill_250bpfermikitraw_3702:HG4_PB_HySA_4107;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3702:HG2_Ill_Krunchall_3775:HG2_Ill_svaba_3347:HG3_Ill_150bpfermikitraw_3532:HG3_Ill_250bpfermikitraw_3647:HG3_Ill_Krunchall_3796:HG3_Ill_svaba_3455:HG4_Ill_250bpfermikitraw_3734:HG4_Ill_Krunchall_3952:HG4_Ill_svaba_3444;NumExactMatchSVs=10;ClusterMaxShiftDist=0.232143;ClusterMaxSizeDiff=0.230089;ClusterMaxEditDist=0.392857;PBcalls=9;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=87350;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=2:218513338-218513397;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3035.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:0:21:2:20:1/1:1:18:1:38:1/1:0:43:./.:.:.:.:.:.
chr2	218947678	HG4_Ill_GATKHCSBGrefine_1884	C	CTGTGTGTTGTGTATATGTTGTGTTGCGTTTTGTGTTGTATTGCATGTGTGTTGTGTTGTGTATGTGTTGTGTGTGTATTGTGAGTGCATGTTATGCATGTGCATTGTGTTGTATGATTGTGATTGTGTGTGGTGTGTACGATGTGTTGTTATGTGTGCGTTATGAATGTAGGTAGTGTTGCGCTGTCTCTGTGTATGTTGTGTTGTATGTGTTGTACTGTGTGTTTTGTGTTGTGCACATATGTTGTGTTTTTGTGCTGTGTTATGTGTATGGGTTACATGTGTGTTGTGTATATATTGAGTTGTGTGTATGTGTTATGCTGTGTGTTGTGTATGTGTTGCGTTGTCTATATGTGTTGTGTGTGTGCCGTGTGTTGTATTGTGTGCGTTATAATATGTAGGGGGTGTTGTGTGCTGTGTGTTCTATTGTGTGTGTTATAATACGTAGGGGTTTTTGTGTTGTGTGTATTGTCTTGTGTGTATATGTTGTATGTGTTGTGTATATGTGTTCTGCTGGGTGTTGTATCTGTTGTTATGTGTTGTATTGTGTGAGTGCATTGTGTGTGTTGTATTGTGTTTTGTGTTGTGTGTATGTGTTGTGTTTTGTGTGAATGTTGTTATGTGTATGGGTTACATTTGTGTTGTGTTGTGTATATGTTGAGTTGTGTATGTGTTATATTGTGTGTGGTGTATGTGTTGTGTTGTGTGTATGTGTTGTGTGTAGTATTGTGTGTGTTACAATGTGTGGGGAGTTGTGTGTGTTGTGTGTATTGTATATATATGTTCTGTTGGGTGTTATGTCTGTTGTGTTATATTGTATTATGTGTATGCATTTTGTGTGTGGTGTGGTGTGTGTTGTAG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7259:HG4_PB_pbsv_2689:HG2_PB_PB10Xdip_16878:HG2_PB_pbsv_2682:HG2_PB_assemblyticsPBcR_14380:HG2_PB_SVrefine2Falcon1plusDovetail_6625:HG2_PB_SVrefine2PBcRplusDovetail_6141:HG4_PB_SVrefine2PBcRDovetail_1424:HG4_Ill_SVrefine2DISCOVARDovetail_2019:HG4_Ill_MetaSV_2848:HG4_Ill_GATKHCSBGrefine_1884:HG2_PB_SVrefine2Falcon2Bionano_1152:HG2_10X_SVrefine210Xhap12_2054:HG2_PB_HySA_5169:HG3_Ill_MetaSV_2899:HG3_Ill_GATKHCSBGrefine_1819:HG2_PB_SVrefine2PB10Xhap12_1999:HG2_Ill_MetaSV_2763:HG4_PB_assemblyticsfalcon_14546:HG4_PB_SVrefine2Falcon1Dovetail_1626:HG3_PB_pbsv_2663:HG3_PB_SVrefine2Falcon1Dovetail_1676:HG3_PB_assemblyticsfalcon_14779:HG2_10X_SVrefine210Xhap12_2053:HG3_PB_SVrefine2PBcRDovetail_1340:HG3_Ill_SVrefine2DISCOVARDovetail_2012;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2054:HG2_PB_SVrefine2Falcon2Bionano_1152:HG4_Ill_GATKHCSBGrefine_1884:HG4_Ill_MetaSV_2848:HG4_Ill_SVrefine2DISCOVARDovetail_2019:HG4_PB_SVrefine2PBcRDovetail_1424;NumExactMatchSVs=6;ClusterMaxShiftDist=0.180969;ClusterMaxSizeDiff=0.180969;ClusterMaxEditDist=0.267367;PBcalls=16;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=860;DistBack=11202;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=2:218947679-218947703;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3036.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:84:1/1:1:27:1:30:./.:10:107:7:122:./.:2:27:1/1:7:208:.:.:.
chr2	219198694	HG2_PB_SVrefine2PBcRplusDovetail_6142	C	TGGTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAATTAGCT	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_14781:HG2_PB_PB10Xdip_16879:HG2_PB_assemblyticsPBcR_14381:HG2_PB_SVrefine2PBcRplusDovetail_6142:HG2_PB_SVrefine2Falcon1plusDovetail_6626:HG3_PB_pbsv_2664:HG3_Ill_GATKHCSBGrefine_1821:HG3_Ill_MetaSV_2900:HG2_PB_pbsv_2683:HG2_PB_HySA_5173:HG3_PB_SVrefine2Falcon1Dovetail_1677:HG2_PB_SVrefine2PB10Xhap12_2000;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6142:HG2_PB_assemblyticsPBcR_14381;NumExactMatchSVs=2;ClusterMaxShiftDist=0.135647;ClusterMaxSizeDiff=0.113565;ClusterMaxEditDist=0.242902;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=-1;DistForward=12;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:219198695-219198693;PctSeqSimilarity=0.9954;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3037.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:40:0|1:25:1:0:33:./.:2:3:18:0:0/1:31:13:0/1:5:16:.:.:.
chr2	219422391	HG3_Ill_GATKHCSBGrefine_1822	G	GCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACAAGGTCAAGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGGATGGTATGAACCCAGGAGGCAGGGTTTGCAGTAAGCCGAGATCACACCACCGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAACAAAACAAAAAGCAAAAAAACCCCATATATATATATATATGATCTTAAAGTGCAGAAAAACATAAAACATTATGTTCTTAACTTCAACTCATATCAAGATGAGTAACTTGGTTGCATAAGAGAAGCAATAAAGAAGTGAAAACAGGCTGGGCGCAGTGGCTCACAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1627:HG2_PB_SVrefine2Falcon1plusDovetail_6627:HG3_PB_HySA_4211:HG3_PB_pbsv_2665:HG4_Ill_manta_662:HG2_PB_pbsv_2684:HG4_PB_pbsv_2690:HG4_Ill_GATKHCSBGrefine_1886:HG3_Ill_GATKHCSBGrefine_1822:HG2_Ill_manta_776:HG2_Ill_GATKHCSBGrefine_1808:HG4_PB_HySA_4110:HG2_PB_HySA_5177:HG2_PB_HySA_5176:HG2_PB_SVrefine2Falcon2Bionano_1153:HG4_PB_SVrefine2PBcRDovetail_1426:HG2_10X_SVrefine210Xhap12_2057:HG3_PB_SVrefine2Falcon1Dovetail_1678;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1808:HG2_Ill_manta_776:HG3_Ill_GATKHCSBGrefine_1822:HG4_Ill_GATKHCSBGrefine_1886:HG4_Ill_manta_662;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0793651;ClusterMaxSizeDiff=0.0770975;ClusterMaxEditDist=0.249448;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=431;DistBack=-278;DistForward=7;DistMin=-278;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=301;REFWIDENED=2:219422370-219422670;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3038.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:36:0|1:29:7:1:18:0|1:26:0:0:11:0/1:23:9:0/1:11:36:.:.:.
chr2	219576610	HG3_PB_SVrefine2Falcon1Dovetail_1679	AACTGCA	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGATGGTTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGGCCCGGCCTAATCACCTATTCTTTAACT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3261:HG3_PB_assemblyticsfalcon_14787:HG3_PB_SVrefine2Falcon1Dovetail_1679:HG3_PB_pbsv_2666:HG2_PB_SVrefine2Falcon1plusDovetail_6628:HG2_PB_pbsv_2685:HG2_PB_HySA_5181;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1679:HG3_PB_assemblyticsfalcon_14787;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0524781;ClusterMaxSizeDiff=0.0524781;ClusterMaxEditDist=0.224138;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=330;DistBack=1;DistForward=52725;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:219576595-219576609;PctSeqSimilarity=0.9805;PctSizeSimilarity=0.9706;PctRecOverlap=0.9355;SizeDiff=-10;StartDistance=17;EndDistance=23;GTMatch=0;TruScore=96;MatchId=3039.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:0|1:26:4:0:16:./.:1:4:37:0:0/1:37:17:0/1:16:15:.:.:.
chr2	219711482	HG3_PB_pbsv_2668	G	GGAGGTGCATTCTCGCCCGGCAGACCACCCCGTCCAGGGGAGGGGGTGGGGGTTCGCCCCCCGCACCGACCATGCCGCCCCAATCTGGGAGGGACGGTGGGGGTTCAGGCCCCCCGCCTGGCCAGCCGTGGCCGTCCGGAGGAGGTGGGGGGTCAGCCCGCTGCGCCGGCCAGCCGCCCCGTCGGGAAAAGGTGAGGGCGCCTTCTGCCCGGCCGCCCCCTACTGGAATGTGAGGAGCCCTCAGCCGGCCAGCCACCCCGTCTGGAGGAGATGGCGTGGGATCAGCCCCCCCACCCGCCAGCCGCCCCTCCGGGGGGGACGGTGGGGGGGTCAGCCCCGCATTGGCAGCCGACCCCATCCGGGAGGGAGGTGGGGGGGTCACCCTCCGCCCTCCGCCCCCGTCTGGGGTGAGGGGCGCTCTGCCGGCTGCCTCTGCGGAAGTGAGGGCCGCCTCTGCCCGGCAGCCCCCCCCGTCCGGGAGGAGTGGGGGTCAGCCCCGCCCGGCCAGCCGCCCTGTCCGGAGGGAGCAGTGGGGGGTCAGCCCTCCGCCCGGCATCCGCCCGTCTGGGAGGTGAGGGCGCCTCTGCCCGCCCCCCTACTGGGAAGTGAAGAGCCCTCTGCCGGCCAGCCGACCCATCCGGAGGAGGTAGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCGCCGGGAGGAGTGGGGGTCAGCCCCCGCTTGGGAGGAGGTGGGGGGTCAGCCCCGCCCGGCCAGCCGCCCCATCCGGAGGGGGTGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGATAGGTGAGGGGCGCCTTGCCCGCCCCTACGGGAAGTTGAGGAGCCCTGCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCCCCGCTCCGGCAGCCGCCCCGTCGGGAGGGAGTGGGTGTCGGCCCCGCTCCGGCCCATCCCCGCCCCGTCGGGAGGGAGGTGCGGGGGTCGGCCCCCACGCCGGCCAGCCGCCCCATCGGAGGGAGGTGGGGTGTCGGCCCCCGCCGGCAGCCGCCCCCTCCGGGAGGGGTGGGGGGCGGCCCGCTCCGGCCAGCCGCCCGCGGGAGGGAGGTGAGGGGGGGCTCTGCCCGGCCGCCCCTATGGGAAGTGAGGAGCCCCTCAGCCCGGTAAGCCACCCGATCGGAGAGGAGAGGGGGGGTCAGCCCCCCCACCCGGCCGAGCCGCCCATTCGGAGAGTGGGGGGTCAGCCCCCGCATGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCTCCGTCCCGGCAGCCGCCCCGTCTGGGAGGTGAGGGTGGCCTCTTGCCCGGCCGCCGCCTACTGGGGGAAGTGAGGAGCCCTCTGCCCGGCCAAGCCCGCGCCCATCCGGGAGGAGGTAGGGGGTCGGCCCCCCCCGGCCAGCCGCCCGTCCGGAGGGAGGTGGAGGGTTCAGCCCCCGCCCGGCAGCCGCCCCGTCCGGAGGAAGTGGGGGTCAGCCCCTCCGCCGCGCCAGCCGCCCCGTCCGGGAGGAGTGCCGGGGAGTCAGCCCCCTCCCGGGCCAGCCGCCCCGTCCGGACGGTTGAGGGGCCCTCTTTGCCCGGCCGCCCTAATGGAAGTGAGGAGCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGTGGGCGGGTAAGCCCCCCGCCGCCAGCCGGCCCCGTCCGGGAGC	10	PASS	ClusterIDs=HG3_PB_pbsv_2668:HG4_PB_SVrefine2Falcon1Dovetail_1628:HG3_PB_SVrefine2Falcon1Dovetail_1680:HG2_PB_SVrefine2Falcon1plusDovetail_6629:HG2_PB_SVrefine2PBcRplusDovetail_6144:HG2_PB_SVrefine2Falcon2Bionano_1154:HG2_PB_SVrefine2PB10Xhap12_2002;NumClusterSVs=7;ExactMatchIDs=HG3_PB_pbsv_2668;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0641892;ClusterMaxSizeDiff=0.0641892;ClusterMaxEditDist=0.152484;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1718;DistBack=91;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=185;REFWIDENED=2:219711483-219711667;PctSeqSimilarity=0.9272;PctSizeSimilarity=0.9368;PctRecOverlap=0.9368;SizeDiff=-116;StartDistance=-49;EndDistance=-49;GTMatch=0;TruScore=93;MatchId=3040.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:3:21:2:25:./.:0:0:0:0:./.:1:0:0/1:18:51:.:1927:.
chr2	220936379	HG3_Ill_GATKHCSBGrefine_1826	C	CCCAAGGCCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1683:HG2_PB_pbsv_2689:HG3_PB_assemblyticsfalcon_14797:HG2_PB_HySA_5194:HG2_PB_SVrefine2Falcon1plusDovetail_6630:HG4_PB_pbsv_2696:HG3_PB_pbsv_2672:HG4_PB_HySA_4123:HG4_Ill_SVrefine2DISCOVARDovetail_2032:HG4_Ill_GATKHCSBGrefine_1892:HG3_Ill_GATKHCSBGrefine_1826:HG4_PB_SVrefine2PBcRDovetail_1428:HG4_PB_SVrefine2Falcon1Dovetail_1632:HG2_PB_SVrefine2Falcon2Bionano_1155:HG3_PB_HySA_4227;NumClusterSVs=15;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_1826:HG4_Ill_GATKHCSBGrefine_1892;NumExactMatchSVs=2;ClusterMaxShiftDist=0.315789;ClusterMaxSizeDiff=0.315789;ClusterMaxEditDist=0.333333;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=120;DistBack=21714;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:220936380-220936395;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9833;PctRecOverlap=0.9835;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3041.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:16:0|1:22:3:1:12:1|0:0:8:13:0:0/1:19:6:./.:.:.:.:.:.
chr2	220937913	HG2_PB_SVrefine2Falcon2Bionano_1156	T	TAAATTACATCCTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_5195:HG2_PB_pbsv_2690:HG4_PB_pbsv_2697:HG3_PB_pbsv_2673:HG2_PB_SVrefine2Falcon1plusDovetail_6631:HG3_PB_assemblyticsfalcon_14798:HG4_PB_SVrefine2PBcRDovetail_1429:HG4_PB_SVrefine2Falcon1Dovetail_1633:HG2_PB_SVrefine2Falcon2Bionano_1156:HG3_PB_SVrefine2Falcon1Dovetail_1684:HG2_Ill_MetaSV_2765:HG4_PB_HySA_4124;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1156:HG4_PB_SVrefine2Falcon1Dovetail_1633;NumExactMatchSVs=2;ClusterMaxShiftDist=0.148936;ClusterMaxSizeDiff=0.148936;ClusterMaxEditDist=0.215805;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:220937914-220937928;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3042.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:31:0|1:26:2:0:21:./.:0:4:12:0:0/1:12:7:0/1:4:35:.:.:.
chr2	221388437	HG2_Ill_250bpfermikitraw_3731	C	CTACTTGGATAGATATATAGATATATAAAATAGATAGATATAGTGCCTATAAAATAGTTACTATATAGTTATCTATGTACCACTATATAGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2066:HG4_PB_HySA_4130:HG2_PB_pbsv_2692:HG2_PB_PB10Xdip_16886:HG4_PB_pbsv_2701:HG3_PB_HySA_4232:HG3_PB_pbsv_2675:HG4_Ill_Krunchall_3985:HG4_Ill_GATKHC_4550:HG4_Ill_GATKHCSBGrefine_1895:HG4_Ill_250bpfermikitraw_3763:HG4_Ill_150bpfermikitraw_3637:HG3_Ill_Krunchall_3824:HG3_Ill_GATKHCSBGrefine_1828:HG3_Ill_250bpfermikitraw_3673:HG3_Ill_150bpfermikitraw_3566:HG2_Ill_Krunchall_3803:HG2_Ill_GATKHCSBGrefine_1813:HG2_Ill_250bpfermikitraw_3731:HG2_Ill_150bpfermikitraw_3475:HG2_PB_HySA_5201:HG4_PB_SVrefine2PBcRDovetail_1431:HG4_PB_SVrefine2Falcon1Dovetail_1635:HG4_Ill_SVrefine2DISCOVARDovetail_2036:HG3_PB_SVrefine2PBcRDovetail_1342:HG3_PB_SVrefine2Falcon1Dovetail_1686:HG3_Ill_SVrefine2DISCOVARDovetail_2021:HG2_PB_SVrefine2PBcRplusDovetail_6146:HG2_PB_SVrefine2PB10Xhap12_2005:HG2_PB_SVrefine2Falcon2Bionano_1157:HG2_PB_SVrefine2Falcon1plusDovetail_6633:HG2_Ill_SVrefine2DISCOVARplusDovetail_7267;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3475:HG2_Ill_250bpfermikitraw_3731:HG2_Ill_GATKHCSBGrefine_1813:HG2_Ill_Krunchall_3803:HG3_Ill_150bpfermikitraw_3566:HG3_Ill_250bpfermikitraw_3673:HG3_Ill_GATKHCSBGrefine_1828:HG3_Ill_Krunchall_3824:HG4_Ill_150bpfermikitraw_3637:HG4_Ill_250bpfermikitraw_3763:HG4_Ill_GATKHCSBGrefine_1895:HG4_Ill_GATKHC_4550:HG4_Ill_Krunchall_3985;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0752688;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.232804;PBcalls=15;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=90;DistBack=-82;DistForward=13139;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=99;REFWIDENED=2:221388431-221388529;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3043.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:69:1/1:4:22:0:13:./.:1:28:1:17:1/1:1:56:./.:.:.:.:.:.
chr2	222207761	HG4_PB_SVrefine2Falcon1Dovetail_1639	A	ATATAACTATTTAACTATATATATATAGTTTATAACTTTATAACTATATAACTATATATGTATATAGTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6637:HG4_PB_SVrefine2PBcRDovetail_1433:HG2_Ill_250bpfermikitraw_3745:HG4_PB_HySA_4139:HG2_PB_pbsv_2701:HG2_PB_HySA_5217:HG4_PB_pbsv_2707:HG4_PB_SVrefine2Falcon1Dovetail_1639:HG4_Ill_SVrefine2DISCOVARDovetail_2040:HG2_PB_SVrefine2PB10Xhap12_2008;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6637:HG4_PB_SVrefine2Falcon1Dovetail_1639:HG4_Ill_SVrefine2DISCOVARDovetail_2040:HG2_PB_SVrefine2PB10Xhap12_2008;NumExactMatchSVs=4;ClusterMaxShiftDist=0.211268;ClusterMaxSizeDiff=0.197183;ClusterMaxEditDist=0.295775;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=68;DistBack=5319;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=78;REFWIDENED=2:222207760-222207840;PctSeqSimilarity=0.9385;PctSizeSimilarity=0.9444;PctRecOverlap=0.1644;SizeDiff=-4;StartDistance=-59;EndDistance=-59;GTMatch=0;TruScore=68;MatchId=3044.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:28:0|1:19:2:7:24:0/0:8:0:9:0:0/0:47:2:./.:.:.:.:.:.
chr2	223882868	HG2_PB_SVrefine2Falcon1plusDovetail_6646	T	TAAGAGTTCCTCAGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGGAGCTTGCAGTGAGCGGAGATCGCGCCACAGCACTCCCGCCTGGGCGACAGAACGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16903:HG2_PB_pbsv_2713:HG3_PB_pbsv_2694:HG4_PB_HySA_4154:HG4_PB_pbsv_2718:HG2_PB_assemblyticsPBcR_14437:HG2_PB_SVrefine2PB10Xhap12_2018:HG2_PB_SVrefine2PBcRplusDovetail_6158:HG2_PB_SVrefine2Falcon2Bionano_1167:HG4_Ill_MetaSV_2860:HG4_Ill_GATKHCSBGrefine_1908:HG3_Ill_GATKHCSBGrefine_1838:HG2_PB_SVrefine2Falcon1plusDovetail_6646:HG2_Ill_GATKHCSBGrefine_1823:HG4_PB_SVrefine2Falcon1Dovetail_1645:HG2_PB_HySA_5245;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1823:HG2_PB_SVrefine2Falcon1plusDovetail_6646:HG3_Ill_GATKHCSBGrefine_1838:HG4_Ill_GATKHCSBGrefine_1908:HG4_Ill_MetaSV_2860;NumExactMatchSVs=5;ClusterMaxShiftDist=0.132013;ClusterMaxSizeDiff=0.132013;ClusterMaxEditDist=0.187192;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=306;DistBack=5561;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=2:223882869-223882884;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3045.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:19:35:1|0:0:24:18:1:1|0:0:11:19:0:0/1:30:6:./.:4:44:.:.:.
chr2	224039701	HG2_10X_SVrefine210Xhap12_2082	AACT	GTGTGGAAAAAATGTTCTCCATCCATCTTGTTCTACAATAGATGGAGAATGTTCTCCAGGATCACTGCTCTTCTCAGGCTTCTAAACAGGTAAAACAGCTAAATATTGCATTAGATGCAATGGCATCAGTCAAAATGAATGATAAGCAACACTTAACTCTCGTATTTTTAAAATTTAAAATTTTAAAATTTAAAATATAAAG	20	PASS	ClusterIDs=HG3_PB_pbsv_2695:HG3_PB_SVrefine2Falcon1Dovetail_1696:HG2_PB_SVrefine2Falcon2Bionano_1169:HG2_10X_SVrefine210Xhap12_2082:HG2_PB_SVrefine2Falcon1plusDovetail_6648:HG3_Ill_MetaSV_2908:HG2_PB_pbsv_2714;NumClusterSVs=7;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2082:HG2_PB_SVrefine2Falcon2Bionano_1169;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0583942;ClusterMaxSizeDiff=0.0583942;ClusterMaxEditDist=0.191847;PBcalls=5;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=198;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:224039705-224039700;PctSeqSimilarity=0.9951;PctSizeSimilarity=1;PctRecOverlap=0.9752;SizeDiff=0;StartDistance=2;EndDistance=5;GTMatch=0;TruScore=99;MatchId=3046.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:0|1:25:0:5:32:0|1:25:0:0:19:0/1:36:13:./.:.:.:.:.:.
chr2	224588001	HG3_Ill_150bpfermikitraw_3598	T	TATGAAATCATAATTTCAATATGAAATTCATATTGAAATTCAATATGAAATTTTCAATATGAAATTCATATGAAATTCATAATTTCAAATATGAAATTCATAATTTCATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1170:HG3_PB_pbsv_2697:HG2_PB_pbsv_2716:HG3_PB_SVrefine2PBcRDovetail_1355:HG3_Ill_svaba_3504:HG3_Ill_manta_619:HG3_Ill_Spiral_2978:HG3_Ill_SVrefine2DISCOVARDovetail_2032:HG3_Ill_MetaSV_2910:HG3_Ill_GATKHCSBGrefine_1841:HG3_Ill_Cortex_2047:HG3_Ill_150bpfermikitraw_3598:HG2_Ill_svaba_3397:HG2_Ill_manta_782:HG2_Ill_SpiralSDKrefine_9431:HG2_Ill_SVrefine2DISCOVARplusDovetail_7277:HG2_Ill_GATKHCSBGrefine_1825:HG2_Ill_Cortex_4738:HG2_10X_SVrefine210Xhap12_2083:HG2_PB_HySA_5252:HG2_Ill_breakscan11_3262:HG3_PB_HySA_4269;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2083:HG2_Ill_Cortex_4738:HG2_Ill_GATKHCSBGrefine_1825:HG2_Ill_SVrefine2DISCOVARplusDovetail_7277:HG2_Ill_SpiralSDKrefine_9431:HG2_Ill_manta_782:HG2_Ill_svaba_3397:HG3_Ill_150bpfermikitraw_3598:HG3_Ill_Cortex_2047:HG3_Ill_GATKHCSBGrefine_1841:HG3_Ill_MetaSV_2910:HG3_Ill_SVrefine2DISCOVARDovetail_2032:HG3_Ill_Spiral_2978:HG3_Ill_manta_619:HG3_Ill_svaba_3504:HG3_PB_SVrefine2PBcRDovetail_1355;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0625;ClusterMaxSizeDiff=0.0535714;ClusterMaxEditDist=0.140351;PBcalls=6;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=109;DistBack=7;DistForward=23666;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=2:224588002-224588002;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3047.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:43:0|1:34:1:3:39:0|1:16:0:0:27:0/1:26:11:./.:.:.:.:.:.
chr2	225774509	HG2_PB_SVrefine2Falcon1plusDovetail_6649	T	TAACATGCAGTGTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3263:HG4_PB_pbsv_2724:HG2_PB_pbsv_2720:HG3_PB_pbsv_2700:HG3_PB_SVrefine2Falcon1Dovetail_1699:HG4_PB_SVrefine2PBcRDovetail_1443:HG2_PB_SVrefine2Falcon2Bionano_1171:HG4_Ill_scalpel_2604:HG4_Ill_manta_671:HG4_Ill_SVrefine2DISCOVARDovetail_2061:HG4_Ill_Krunchall_4028:HG4_Ill_GATKHC_4600:HG4_Ill_GATKHCSBGrefine_1911:HG4_Ill_250bpfermikitraw_3803:HG4_Ill_150bpfermikitraw_3673:HG3_Ill_Spiral_2986:HG3_Ill_SVrefine2DISCOVARDovetail_2038:HG3_Ill_Krunchall_3867:HG3_Ill_GATKHC_4659:HG3_Ill_GATKHCSBGrefine_1854:HG2_PB_SVrefine2PBcRplusDovetail_6160:HG2_PB_SVrefine2PB10Xhap12_2022:HG2_PB_SVrefine2Falcon1plusDovetail_6649:HG2_Ill_manta_784:HG2_Ill_SVrefine2DISCOVARplusDovetail_7280:HG2_Ill_Krunchall_3851:HG2_Ill_GATKHC_4520:HG2_Ill_GATKHCSBGrefine_1827:HG2_Ill_250bpfermikitraw_3774:HG2_Ill_150bpfermikitraw_3516:HG2_10X_SVrefine210Xhap12_2089:HG2_PB_HySA_5262:HG2_PB_PB10Xdip_16908;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2089:HG2_Ill_150bpfermikitraw_3516:HG2_Ill_250bpfermikitraw_3774:HG2_Ill_GATKHCSBGrefine_1827:HG2_Ill_GATKHC_4520:HG2_Ill_Krunchall_3851:HG2_Ill_SVrefine2DISCOVARplusDovetail_7280:HG2_Ill_manta_784:HG2_PB_SVrefine2Falcon1plusDovetail_6649:HG2_PB_SVrefine2PB10Xhap12_2022:HG2_PB_SVrefine2PBcRplusDovetail_6160:HG3_Ill_GATKHCSBGrefine_1854:HG3_Ill_GATKHC_4659:HG3_Ill_Krunchall_3867:HG3_Ill_SVrefine2DISCOVARDovetail_2038:HG3_Ill_Spiral_2986:HG4_Ill_150bpfermikitraw_3673:HG4_Ill_250bpfermikitraw_3803:HG4_Ill_GATKHCSBGrefine_1911:HG4_Ill_GATKHC_4600:HG4_Ill_Krunchall_4028:HG4_Ill_SVrefine2DISCOVARDovetail_2061:HG4_Ill_manta_671:HG4_Ill_scalpel_2604;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0873786;ClusterMaxSizeDiff=0.0776699;ClusterMaxEditDist=0.180095;PBcalls=11;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=99;DistBack=17364;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:225774510-225774524;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3048.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:57:1/1:2:30:2:22:./.:0:21:2:15:1/1:0:20:./.:.:.:.:.:.
chr2	227350684	HG4_Ill_FB_2560	G	GTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATA	20	PASS	ClusterIDs=HG2_PB_HySA_5289:HG2_Ill_GATKHC_4542:HG4_PB_HySA_4183:HG2_Ill_GATKHCSBGrefine_1834:HG4_Ill_GATKHC_4622:HG4_Ill_GATKHCSBGrefine_1921:HG4_Ill_manta_676:HG2_PB_assemblyticsPBcR_14475:HG2_PB_PB10Xdip_16912:HG2_PB_HySA_5290:HG4_Ill_Krunchall_4049:HG4_Ill_FB_2560:HG4_Ill_250bpfermikitraw_3822:HG2_Ill_150bpfermikitraw_3534:HG4_Ill_150bpfermikitraw_3692:HG4_PB_pbsv_2736:HG2_PB_pbsv_2729;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3534:HG4_Ill_250bpfermikitraw_3822:HG4_Ill_FB_2560:HG4_Ill_Krunchall_4049;NumExactMatchSVs=4;ClusterMaxShiftDist=0.178571;ClusterMaxSizeDiff=0.178571;ClusterMaxEditDist=0.34188;PBcalls=7;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=6422;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=2:227350683-227350686;PctSeqSimilarity=0.9913;PctSizeSimilarity=0.9821;PctRecOverlap=0.9649;SizeDiff=1;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=97;MatchId=3049.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:35:0|1:20:3:3:30:./.:1:5:18:0:0/1:33:20:./.:.:.:.:.:.
chr2	227521141	HG3_Ill_150bpfermikitraw_3623	G	GATTTTGATTGCCCCAGTCTTTAAGTACTCAGAAAAGACACTTTACTGTTTGTGCGCACAGGGAAATTATTGTGGTT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3535:HG2_PB_PB10Xdip_16913:HG2_PB_HySA_5293:HG4_PB_pbsv_2737:HG3_PB_HySA_4307:HG2_PB_pbsv_2730:HG4_PB_SVrefine2PBcRDovetail_1449:HG3_PB_pbsv_2714:HG4_PB_SVrefine2Falcon1Dovetail_1655:HG4_Ill_SVrefine2DISCOVARDovetail_2067:HG4_Ill_Krunchall_4050:HG4_Ill_GATKHC_4623:HG4_Ill_GATKHCSBGrefine_1922:HG4_Ill_250bpfermikitraw_3823:HG4_Ill_150bpfermikitraw_3693:HG3_PB_assemblyticsfalcon_14856:HG3_PB_SVrefine2PBcRDovetail_1365:HG3_Ill_SVrefine2DISCOVARDovetail_2052:HG3_Ill_Krunchall_3892:HG3_Ill_GATKHC_4681:HG3_Ill_GATKHCSBGrefine_1865:HG3_Ill_250bpfermikitraw_3734:HG3_Ill_150bpfermikitraw_3623:HG2_PB_SVrefine2PBcRplusDovetail_6166:HG2_PB_SVrefine2PB10Xhap12_2028:HG2_PB_SVrefine2Falcon2Bionano_1176:HG2_PB_SVrefine2Falcon1plusDovetail_6655:HG2_Ill_SVrefine2DISCOVARplusDovetail_7290:HG2_Ill_Krunchall_3871:HG2_Ill_GATKHC_4543:HG2_Ill_GATKHCSBGrefine_1835:HG2_Ill_250bpfermikitraw_3794;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3535:HG4_PB_SVrefine2PBcRDovetail_1449:HG4_PB_SVrefine2Falcon1Dovetail_1655:HG4_Ill_SVrefine2DISCOVARDovetail_2067:HG4_Ill_Krunchall_4050:HG4_Ill_GATKHC_4623:HG4_Ill_GATKHCSBGrefine_1922:HG4_Ill_250bpfermikitraw_3823:HG4_Ill_150bpfermikitraw_3693:HG3_PB_assemblyticsfalcon_14856:HG3_PB_SVrefine2PBcRDovetail_1365:HG3_Ill_SVrefine2DISCOVARDovetail_2052:HG3_Ill_Krunchall_3892:HG3_Ill_GATKHC_4681:HG3_Ill_GATKHCSBGrefine_1865:HG3_Ill_250bpfermikitraw_3734:HG3_Ill_150bpfermikitraw_3623:HG2_PB_SVrefine2PBcRplusDovetail_6166:HG2_PB_SVrefine2PB10Xhap12_2028:HG2_PB_SVrefine2Falcon2Bionano_1176:HG2_PB_SVrefine2Falcon1plusDovetail_6655:HG2_Ill_SVrefine2DISCOVARplusDovetail_7290:HG2_Ill_Krunchall_3871:HG2_Ill_GATKHC_4543:HG2_Ill_GATKHCSBGrefine_1835:HG2_Ill_250bpfermikitraw_3794;NumExactMatchSVs=26;ClusterMaxShiftDist=0.1125;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.315152;PBcalls=14;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=76;DistBack=2026;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=77;REFWIDENED=2:227521142-227521218;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3050.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:1:10:1:17:1/1:0:38:1:17:1/1:2:64:./.:.:.:.:.:.
chr2	227580158	HG2_PB_SVrefine2Falcon2Bionano_1177	C	CTGTGTGTGTGTGTGTGTGTGTGCGTGTGGTGGGGTGTGTGTGTGTGTGTGTCTATGTGTGTGTGTGTGTGTCTGTGTGGTGGGGTGTGTGTAGTGTGTGTGTATGTGGTGGAGTGTGTGTGTGGTGGTGTGAGTATGTGGGGTGTGTGTGTGGTGTGTATGGTATGTGTGGGTATGGGAGGAGTGGGTTGTGTGTGTGTGGTGGTGTGTGTGTGTAGGTGGGGTGTGTGTGGTGTGTGGTGTGTGTATGTGGTGTGTGTGTGCGTGTGGTGGGGTGTGTGTGTATGTGGTGGAGTGTGTGTGTCTGTGGTGTGTGGTGTGTATTTGTGGGGTGTGTGTGGTGGTGTGTGTGGTGTGTGTGGGCATGGGAGGAGTGGGTTGTGTGTGTGGTGTGTGTGTGTGGTGGTGTGTGGTGTGTGTATGTGGGGTGTGTGTGGTATGTGGTGGTGTGAGTGTGGTGTGTGTGGTTGTAGGAGGAGTGGGTTGTGGGTGTGTGTGGTGGTGTGTGTGTGGTGGTGTGTGGGTGGGGGGGTGGGTTGCGTGTGTGGTGGTATGTGTATGTGGGGTGTGTGTGTGTGGGTGTGGGTGTGGTGTGTATGGGTGTGGGAGGGTGGGTTATGGGAGTGTGTATGTGGTGGTGTGTGTAGTATGTGTGTGATGTGTGTATATGGCATGTGTGTGCATATGTGGTGTGTGTATGTGGGAGTGTGTGTGTGGTGTGTGGTGTGTGTATGTGGTGTGTGCGTGTGTGGTGGGGTGTGTGTGGTGTGTGTGTATGTGGCAGAGTGTGTGTGTGTATGTGGGGTGTGTGTGGTTTGTGTTTGGTGGTGTGTGTGGTGTGTGTGCGTATGGGAGGAGTGGGTTGTGTGTGTGTTGTGTGTGTGGTGGTGTGTGGTGTATGTGGGGTGTGTGTGTGGTATGTGGTGGTATGAGTGTGGTGTGTGCGGTTGTAGGAAGAGTGGGTTGTGGGTGTGTGTGGTGGTGTGTATGTGGGGTGTGTGTGTGTTGTGTGTGGTGGTGTGTGTGGTTGTAGGAGGAGTGGGTTGTGGGTGTGTGTGGTGGTGTGTGTGTGGTGTTTGTGTGTGGTGGTGTTTGTGGTGGTGCATGGTGTGTATGCGGGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1706:HG3_PB_pbsv_2715:HG4_PB_pbsv_2738:HG2_PB_pbsv_2731:HG3_PB_HySA_4310:HG3_PB_HySA_4309:HG4_PB_HySA_4186:HG2_PB_HySA_5296:HG2_PB_HySA_5295:HG2_Ill_breakscan11_3264:HG2_PB_PB10Xdip_16914:HG2_Ill_SVrefine2DISCOVARplusDovetail_7291:HG4_PB_SVrefine2Falcon1Dovetail_1656:HG4_PB_SVrefine2PBcRDovetail_1450:HG2_PB_SVrefine2PBcRplusDovetail_6167:HG2_PB_SVrefine2PB10Xhap12_2029:HG2_PB_SVrefine2Falcon2Bionano_1177:HG3_PB_SVrefine2PBcRDovetail_1366:HG2_PB_SVrefine2Falcon1plusDovetail_6656;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1177:HG2_PB_SVrefine2PB10Xhap12_2029:HG2_PB_SVrefine2PBcRplusDovetail_6167:HG4_PB_SVrefine2PBcRDovetail_1450;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0527704;ClusterMaxSizeDiff=0.0510114;ClusterMaxEditDist=0.200355;PBcalls=17;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1120;DistBack=-423;DistForward=0;DistMin=-423;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=423;REFWIDENED=2:227580159-227580581;PctSeqSimilarity=0.9707;PctSizeSimilarity=0.9938;PctRecOverlap=0.7098;SizeDiff=-7;StartDistance=-324;EndDistance=-324;GTMatch=0;TruScore=89;MatchId=3051.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:92:1/1:0:7:0:8:./.:0:17:1:14:./.:0:2:1/1:5:196:.:1162:.
chr2	228113946	HG3_PB_HySA_4321	A	ATTATATATATATATATATATTATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_14484:HG2_PB_PB10Xdip_16919:HG3_PB_HySA_4321:HG2_PB_HySA_5307;NumClusterSVs=4;ExactMatchIDs=HG3_PB_HySA_4321;NumExactMatchSVs=1;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.117647;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=62;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:228113947-228113948;PctSeqSimilarity=0.9841;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3052.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:43:./.:8:27:5:6:./.:2:7:0:4:./.:2:13:./.:.:.:.:.:.
chr2	228258174	HG2_PB_SVrefine2Falcon2Bionano_1180	C	CAAAGACAAAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_5308:HG2_PB_assemblyticsfalcon_14885:HG3_PB_assemblyticsfalcon_14864:HG2_PB_HySA_5309:HG3_PB_pbsv_2721:HG2_PB_SVrefine2Falcon2Bionano_1180:HG2_PB_pbsv_2736:HG2_PB_SVrefine2Falcon1plusDovetail_6658:HG3_PB_SVrefine2Falcon1Dovetail_1710;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1180;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0633484;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.26215;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=326;DistBack=3564;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=2:228258175-228258186;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3053.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:36:./.:17:12:8:14:./.:26:0:0:4:0/1:27:15:0/1:8:29:.:.:.
chr2	231364227	HG3_Ill_SVrefine2DISCOVARDovetail_2064	A	ATATATATAGATAGATATATATTTTTATATATATATTTATATATATAAATATATATAGATAGATATATATCTATCTATATATATTTATATATATAAATATATATATTTATTTTTTTATATATAAAATATATATATTTATATATATATTTTATATATATAGATATATATATCTATATATTTATTTCCTTTGGCTATGAATTCCCCCACTAGAATGGCAGAAGCAG	20	PASS	ClusterIDs=HG3_PB_pbsv_2730:HG2_PB_assemblyticsfalcon_14923:HG3_PB_HySA_4354:HG4_PB_HySA_4216:HG2_PB_SVrefine2Falcon1plusDovetail_6666:HG3_PB_SVrefine2PBcRDovetail_1373:HG3_Ill_SVrefine2DISCOVARDovetail_2064:HG2_Ill_MetaSV_2783:HG4_Ill_SVrefine2DISCOVARDovetail_2083:HG4_Ill_MetaSV_2874:HG2_PB_SVrefine2Falcon2Bionano_1187:HG2_PB_SVrefine2PBcRplusDovetail_6177:HG4_PB_pbsv_2752:HG3_Ill_MetaSV_2926:HG2_PB_pbsv_2746:HG2_PB_assemblyticsPBcR_14521;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_2783:HG3_Ill_SVrefine2DISCOVARDovetail_2064:HG3_PB_SVrefine2PBcRDovetail_1373;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0683371;ClusterMaxEditDist=0.18427;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=223;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=2:231364228-231364232;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3055.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:39:0|1:18:2:1:34:0|1:11:0:0:16:0/1:21:9:./.:.:.:.:.:.
chr2	231797873	HG2_Ill_svaba_3465	A	AGCTCCCATCTCTCACTGGCTGCCCACTGACTTTTTGGAACCTGGAAGGCCTGCCGCCTTGCAG	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_14525:HG3_PB_pbsv_2732:HG2_PB_PB10Xdip_16930:HG4_PB_pbsv_2754:HG2_Ill_breakscan11_3266:HG3_PB_HySA_4360:HG2_PB_pbsv_2748:HG4_PB_SVrefine2PBcRDovetail_1456:HG4_Ill_svaba_3550:HG4_Ill_manta_686:HG4_Ill_Krunchall_4097:HG4_Ill_GATKHC_4674:HG4_Ill_GATKHCSBGrefine_1936:HG4_Ill_250bpfermikitraw_3860:HG4_Ill_150bpfermikitraw_3733:HG3_Ill_svaba_3573:HG3_Ill_manta_634:HG3_Ill_Spiral_3030:HG3_Ill_Krunchall_3943:HG3_Ill_GATKHC_4737:HG3_Ill_GATKHCSBGrefine_1877:HG3_Ill_250bpfermikitraw_3781:HG2_PB_SVrefine2PBcRplusDovetail_6178:HG2_PB_SVrefine2PB10Xhap12_2041:HG2_PB_SVrefine2Falcon2Bionano_1188:HG2_PB_SVrefine2Falcon1plusDovetail_6667:HG2_Ill_svaba_3465:HG2_Ill_manta_798:HG2_Ill_SpiralSDKrefine_9478:HG2_Ill_SVrefine2DISCOVARplusDovetail_7303:HG2_Ill_Krunchall_3922:HG2_Ill_GATKHC_4600:HG2_Ill_GATKHCSBGrefine_1847:HG2_Ill_250bpfermikitraw_3844:HG2_Ill_150bpfermikitraw_3581:HG2_10X_SVrefine210Xhap12_2108:HG2_PB_assemblyticsfalcon_14927;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2108:HG2_Ill_150bpfermikitraw_3581:HG2_Ill_250bpfermikitraw_3844:HG2_Ill_GATKHCSBGrefine_1847:HG2_Ill_GATKHC_4600:HG2_Ill_Krunchall_3922:HG2_Ill_SVrefine2DISCOVARplusDovetail_7303:HG2_Ill_SpiralSDKrefine_9478:HG2_Ill_manta_798:HG2_Ill_svaba_3465:HG2_PB_SVrefine2Falcon1plusDovetail_6667:HG2_PB_SVrefine2Falcon2Bionano_1188:HG2_PB_SVrefine2PB10Xhap12_2041:HG2_PB_SVrefine2PBcRplusDovetail_6178:HG3_Ill_250bpfermikitraw_3781:HG3_Ill_GATKHCSBGrefine_1877:HG3_Ill_GATKHC_4737:HG3_Ill_Krunchall_3943:HG3_Ill_Spiral_3030:HG3_Ill_manta_634:HG3_Ill_svaba_3573:HG4_Ill_150bpfermikitraw_3733:HG4_Ill_250bpfermikitraw_3860:HG4_Ill_GATKHCSBGrefine_1936:HG4_Ill_GATKHC_4674:HG4_Ill_Krunchall_4097:HG4_Ill_manta_686:HG4_Ill_svaba_3550:HG4_PB_SVrefine2PBcRDovetail_1456;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0930233;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.255639;PBcalls=12;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=63;DistBack=64674;DistForward=4279;DistMin=4279;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:231797874-231797875;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3057.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:59:1/1:8:34:1:17:./.:2:15:0:23:1/1:0:35:./.:.:.:.:.:.
chr2	231802158	HG2_10X_SVrefine210Xhap12_2109	C	CTGTTCTTTGTTTCTTAAGACCATCTTCCTTGTACTTCCTTGTCTCCTAGCTACCTGTTCTGTAAACAACCCTCCCCGCCTTTGCCGCACCCAGACAACTCCAGGCACACCTTCCCGCCCAGTAACGGGAAGCCTCTACCTTCCCGCCTAATTGACCCTATTCAATTTTAAACCTTAGCCAATTGGGCTAGCTTAGATTATGCAGTCCAACCCCAGCCAA	20	PASS	ClusterIDs=HG4_PB_pbsv_2755:HG2_PB_pbsv_2749:HG2_PB_assemblyticsfalcon_14928:HG2_PB_assemblyticsPBcR_14526:HG2_PB_PB10Xdip_16931:HG2_Ill_breakscan11_3267:HG4_PB_SVrefine2Falcon1Dovetail_1666:HG4_Ill_SVrefine2DISCOVARDovetail_2087:HG4_Ill_MetaSV_2875:HG3_Ill_MetaSV_2927:HG3_Ill_GATKHCSBGrefine_1878:HG2_PB_SVrefine2PBcRplusDovetail_6179:HG2_PB_SVrefine2PB10Xhap12_2042:HG2_PB_SVrefine2Falcon2Bionano_1189:HG2_PB_SVrefine2Falcon1plusDovetail_6668:HG2_Ill_SVrefine2DISCOVARplusDovetail_7304:HG2_Ill_MetaSV_2784:HG2_Ill_GATKHCSBGrefine_1848:HG2_10X_SVrefine210Xhap12_2109:HG4_PB_SVrefine2PBcRDovetail_1457:HG4_Ill_GATKHCSBGrefine_1937:HG3_PB_pbsv_2733;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2109:HG2_Ill_GATKHCSBGrefine_1848:HG2_Ill_MetaSV_2784:HG2_Ill_SVrefine2DISCOVARplusDovetail_7304:HG2_PB_SVrefine2Falcon1plusDovetail_6668:HG2_PB_SVrefine2Falcon2Bionano_1189:HG2_PB_SVrefine2PB10Xhap12_2042:HG2_PB_SVrefine2PBcRplusDovetail_6179:HG3_Ill_GATKHCSBGrefine_1878:HG3_Ill_MetaSV_2927:HG4_Ill_MetaSV_2875:HG4_Ill_SVrefine2DISCOVARDovetail_2087:HG4_PB_SVrefine2Falcon1Dovetail_1666;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0547945;ClusterMaxSizeDiff=0.0315315;ClusterMaxEditDist=0.226244;PBcalls=12;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=219;DistBack=4;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=2:231802159-231802160;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3058.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:61:./.:8:24:0:22:1/1:0:26:0:12:1/1:0:40:./.:.:.:.:.:.
chr2	232279799	HG2_10X_SVrefine210Xhap12_2112	T	TAAAAGCAGAGAGCTTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCGGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16936:HG2_PB_pbsv_2753:HG4_PB_pbsv_2758:HG4_PB_HySA_4222:HG2_PB_assemblyticsPBcR_14532:HG2_PB_assemblyticsfalcon_14933:HG2_PB_HySA_5366:HG2_Ill_breakscan11_3268:HG3_PB_HySA_4364:HG4_PB_SVrefine2PBcRDovetail_1459:HG3_PB_SVrefine2PBcRDovetail_1377:HG2_PB_SVrefine2Falcon2Bionano_1192:HG2_Ill_GATKHCSBGrefine_1850:HG2_10X_SVrefine210Xhap12_2112:HG3_PB_SVrefine2Falcon1Dovetail_1719:HG3_Ill_SVrefine2DISCOVARDovetail_2069:HG2_PB_SVrefine2PBcRplusDovetail_6183:HG2_PB_SVrefine2PB10Xhap12_2048:HG2_PB_SVrefine2Falcon1plusDovetail_6671:HG4_PB_SVrefine2Falcon1Dovetail_1670;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2112:HG2_Ill_GATKHCSBGrefine_1850:HG2_PB_SVrefine2Falcon2Bionano_1192:HG3_PB_SVrefine2PBcRDovetail_1377;NumExactMatchSVs=4;ClusterMaxShiftDist=0.14534;ClusterMaxSizeDiff=0.14534;ClusterMaxEditDist=0.183254;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=316;DistBack=34004;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:232279800-232279814;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3060.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:84:1/1:0:17:0:21:./.:0:2:0:4:./.:0:8:1/1:2:55:.:.:.
chr2	232499198	HG4_PB_SVrefine2Falcon1Dovetail_1672	G	GGGGAGGGAGGAGGGGAGGGAGGGGAGGGGAGGGAGGGGGAGGGAGGGAGGGGAGGGGAGGAGGGGGAGGGGAGGGAGGGGAGGGAGGGGAGGGAGGGGA	10	PASS	ClusterIDs=HG4_PB_pbsv_2760:HG4_PB_SVrefine2PBcRDovetail_1461:HG3_PB_SVrefine2Falcon1Dovetail_1721:HG4_PB_assemblyticsfalcon_14676:HG4_PB_SVrefine2Falcon1Dovetail_1672:HG3_PB_SVrefine2PBcRDovetail_1379:HG2_PB_assemblyticsfalcon_14938:HG2_PB_SVrefine2Falcon1plusDovetail_6673:HG2_PB_SVrefine2PBcRplusDovetail_6186;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_1672;NumExactMatchSVs=1;ClusterMaxShiftDist=0.129353;ClusterMaxSizeDiff=0.129353;ClusterMaxEditDist=0.252427;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=99;DistBack=-8;DistForward=0;DistMin=-8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=30;REFWIDENED=2:232499178-232499207;PctSeqSimilarity=0.9312;PctSizeSimilarity=0.9429;PctRecOverlap=0.9143;SizeDiff=-6;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=92;MatchId=3061.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:36:1/1:2:18:2:11:./.:0:1:0:1:./.:1:2:./.:.:.:.:.:.
chr2	232734665	HG3_PB_pbsv_2749	C	CTCCCTCCTTCCCTCCTCTTCCCTTCCTCCTTCCCTCCTCTCTCCCTCCCTCCCTCCCTCTCCCTCCAATCTTCCCTTCCTCTCTCCTCCCTCCTTCCTCCTTCTCTCCCTCCATCTTCCCGGCCCTCCTTCTCCTCCCTCCTTCCTCCTCTTCCCTCCATCCTTCCTCCTCTCTCCTCCATCCTTCCTCCTCTCTCCTCCTCTTCCTCCTTCTCCCCTCCCTCCTTCCTTCCTCCTTCCCTCCATCCTTCCTCCTCCTCTCTCCCTCGCTCCTTCCTCTCTCCCCTCCCTCCTTCCCTCCTCTCTCCCTCCCTCCTTCCCCTCTCTCCCTCACCTCCTTCCCATCCTCTCTCTCCCTCCTTCTCTCTCTCCTCCTCCTTCCTCCCTCTCCCTCCATCCTTCCCTCCTCTCTCCTCCATCTCCATCCTCTCTGCTCCCTCCTTCCCCCTCTCTCCTCCCTCCTTCCTCCCTCTCTCCCTCCCTCCTTTCCCTCTCTCTCTTCCCTCATCCTTCCTCCTCCTCCTCCATCCTTCCCTCCTCTTCTCCTCCCTCCTTCCTCCTCTCTCCCTCCCTCCTTCCTCCTTCTCCTCCCTTCCTTACCCTCTTCTCTCCTCTCATCTCCTCTTCTCCCTCCATTCCTTCCCCCTCTCTCCTCCATCCTTCTCTCTCTCCCTCCATCCTTCCTCCTCCTCTCCTCCATCCTTCCTCTCTCTCCCTCCTCCTTCCCTCGCTCTCTCCCTCCCTCATGTGACCTTCCCGTCCTCTCTCCCTCCTCCTGCCCGTCCCTTCTCCTTCCTCCTCCCTCCTCTCTCGCTCCTCCCTCCCTCCTCTCTCCTCCTCCCCCTCTCTCTCCCTCCTCCTCCTCCTGCTCTACCCTCGCCTCGCTCCCTCCTCTCTCCTCCTCCCTCCTCTCTCCCCCTCCCTCCCTCGCCTTCCTCCTCCCTCCTCCCTCCTCCTCCTCCATCCCCCCTCCTCTCTCCCTCCACCTCCCTCTCCTCTCTCCTCCCTCCCCTCCCTCCTCTCTCCTCCTCCTCCCTCCTGCTCTCCTCCCCTCCCTCCTCCTCCTCTTCCCTCCTCCTCCTCCTCTCTCCCTCCCTCCTCCTCCTCTCTCCCTCCTCCTCCCTCCTCTCTCCCTCCTCCTCCTCTCTCTCCCTCCCTCCCTCCCTCCTCTCTCCCCTCCTCCCTCCTCCTCCTCCCTCCCTCCCTCCCTCCTCTCTCCCTCCATCCCTCCTCCTTCTCCATCCATCCTCCCTTTCTCTCCTCCTCCCTCCCTCCTCTTCCCTCCCTCCCTCTTCCCTCTCGCCTCTCTCCCTCCTCCTCTCTCTCCTCTCCTCCCTCCTCCTCTCTCTCCCTCCTCCTCCTCTCTCCTCCCTCCTCCTCCCTCTCTCCTCCTCCTCCTCCTCTCTTCCTCTCCTCCTTCCTCTCTCCTCCCTCCCTCCTCCATCTCTCCCTCCTCCCTCCCATCCTCTCTCCTCCCTCCTCCCTCCTCTCTCCCTCCTCCTCCTCCTGCTCTCTCCTCCTCCCTCCTTCTCCTCCCTCCCTCCCTCACTCTCTCCCTCCCTCCTCCTCCCTCTCCCTCCTCCTCCCCCTCTCTCCCGTCCTCCCATCCTCCTCTCTCCTCAACTCCTCCCTCCTCTCTCCCTCCTCCTTCCTCTCTCTCCCCTCCTCCCTCCTCTCTCCTCCAGTGCTTCCTCCTCTCTCCTCCTCCTTCCCTTCTCTCTCTGCCTCTTCCTCCTCTCTCAGCCTCCATTCCTTCCTCCTCTCTCCTCCCTCCCTCCTCTCTCCCTCCATCCTTCCCTCTCTCTCCCTCCCTCACTCCCTCCTCTCTCCTCCATCCTTCCTCCTCTCTCCCTCCTCCTTCCTCCTTTCTTTCCACCCCTTCCTGCTTCCTTCCTT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_1465:HG4_PB_pbsv_2767:HG4_PB_HySA_4236:HG4_PB_HySA_4235:HG3_PB_pbsv_2749:HG3_PB_SVrefine2Falcon1Dovetail_1724:HG2_PB_assemblyticsfalcon_14941:HG3_PB_assemblyticsfalcon_14912:HG4_PB_assemblyticsfalcon_14678:HG4_PB_SVrefine2Falcon1Dovetail_1676:HG2_PB_SVrefine2Falcon1plusDovetail_6676;NumClusterSVs=11;ExactMatchIDs=HG3_PB_pbsv_2749;NumExactMatchSVs=1;ClusterMaxShiftDist=0.202571;ClusterMaxSizeDiff=0.202571;ClusterMaxEditDist=0.233933;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=6;NumTechs=1;NumTechsExact=1;SVLEN=1895;DistBack=15;DistForward=23;DistMin=15;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=97;REFWIDENED=2:232734666-232734762;PctSeqSimilarity=0.9165;PctSizeSimilarity=0.9372;PctRecOverlap=0.9367;SizeDiff=-127;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=93;MatchId=3062.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:9:23:./.:3:1:1:6:./.:2:3:1:9:1/1:0:11:1/1:6:289:5304:.:.
chr2	233111619	HG2_PB_SVrefine2Falcon2Bionano_1198	A	TGCTTGCAGTTGACAGAGAAGTTGCAAGGGTAGTAAAGAGTGGTCCCATACCCGGTTCCTCCATGTTAACATCTTACGTGACTACGCTTCATGTGTCCTAACTCAGAAACTGACATTGGAATATTACTAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3586:HG4_PB_assemblyticsfalcon_14681:HG4_PB_SVrefine2PBcRDovetail_1466:HG4_PB_SVrefine2Falcon1Dovetail_1677:HG4_Ill_manta_689:HG3_PB_assemblyticsfalcon_14914:HG3_PB_SVrefine2PBcRDovetail_1382:HG3_PB_SVrefine2Falcon1Dovetail_1725:HG3_Ill_manta_637:HG3_Ill_Spiral_3041:HG3_Ill_SVrefine2DISCOVARDovetail_2077:HG2_PB_assemblyticsfalcon_14943:HG2_PB_SVrefine2PBcRplusDovetail_6190:HG2_PB_SVrefine2PB10Xhap12_2054:HG2_PB_SVrefine2Falcon2Bionano_1198:HG2_PB_SVrefine2Falcon1plusDovetail_6677:HG2_Ill_manta_801:HG2_Ill_SpiralSDKrefine_9487:HG2_Ill_SVrefine2DISCOVARplusDovetail_7312:HG2_10X_SVrefine210Xhap12_2116:HG2_Ill_breakscan11_3269:HG2_PB_pbsv_2763:HG2_PB_HySA_5372:HG3_PB_pbsv_2751:HG4_Ill_GATKHCSBGrefine_1941:HG4_PB_pbsv_2769:HG3_Ill_GATKHCSBGrefine_1883:HG2_Ill_GATKHCSBGrefine_1853:HG2_PB_PB10Xdip_16958:HG4_Ill_MetaSV_2880:HG3_Ill_MetaSV_2930:HG2_Ill_MetaSV_2788:HG3_Ill_250bpfermikitraw_3790:HG3_Ill_150bpfermikitraw_3683:HG2_Ill_250bpfermikitraw_3850;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2116:HG2_Ill_SVrefine2DISCOVARplusDovetail_7312:HG2_Ill_SpiralSDKrefine_9487:HG2_Ill_manta_801:HG2_PB_SVrefine2Falcon1plusDovetail_6677:HG2_PB_SVrefine2Falcon2Bionano_1198:HG2_PB_SVrefine2PB10Xhap12_2054:HG2_PB_SVrefine2PBcRplusDovetail_6190:HG2_PB_assemblyticsfalcon_14943:HG3_Ill_SVrefine2DISCOVARDovetail_2077:HG3_Ill_Spiral_3041:HG3_Ill_manta_637:HG3_PB_SVrefine2Falcon1Dovetail_1725:HG3_PB_SVrefine2PBcRDovetail_1382:HG3_PB_assemblyticsfalcon_14914:HG4_Ill_manta_689:HG4_PB_SVrefine2Falcon1Dovetail_1677:HG4_PB_SVrefine2PBcRDovetail_1466:HG4_PB_assemblyticsfalcon_14681;NumExactMatchSVs=19;ClusterMaxShiftDist=0.108527;ClusterMaxSizeDiff=0.0930233;ClusterMaxEditDist=0.203774;PBcalls=16;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=11;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=129;DistBack=0;DistForward=74649;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:233111620-233111618;PctSeqSimilarity=0.9962;PctSizeSimilarity=0.9922;PctRecOverlap=0.9922;SizeDiff=1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3063.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:0:7:0:10:1/1:0:25:0:25:1/1:0:24:./.:.:.:.:.:.
chr2	233750851	HG2_Ill_GATKHC_4626	C	CTGTGTATGCATGTGCGGTGTGTACGGTGTGATGTATGTGCCATGTTTGTGCATGTGTGCTGTGTATACACGTGTGCAGTGTTGTGTGCCGTGCATATGTGCAGAGTGCTGTGTGTGTGTGTGCTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2121:HG2_PB_pbsv_2768:HG2_Ill_breakscan11_3270:HG3_PB_pbsv_2755:HG3_Ill_GATKHC_4759:HG3_Ill_GATKHCSBGrefine_1889:HG2_Ill_GATKHC_4626:HG2_Ill_GATKHCSBGrefine_1860:HG2_PB_HySA_5379;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1860:HG2_Ill_GATKHC_4626:HG3_Ill_GATKHCSBGrefine_1889:HG3_Ill_GATKHC_4759;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0926641;ClusterMaxSizeDiff=0.0849421;ClusterMaxEditDist=0.208955;PBcalls=3;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=125;DistBack=5351;DistForward=53;DistMin=53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=79;REFWIDENED=2:233750844-233750922;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3065.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:0|1:19:4:2:19:./.:1:42:3:11:0/1:12:18:./.:.:.:.:.:.
chr2	233845876	HG2_Ill_GATKHCSBGrefine_1865	C	CAAAAAGTATAACTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_5383:HG2_PB_pbsv_2773:HG3_PB_pbsv_2760:HG3_Ill_MetaSV_2934:HG2_PB_assemblyticsfalcon_14953:HG2_Ill_MetaSV_2794:HG2_Ill_GATKHCSBGrefine_1865:HG3_PB_SVrefine2Falcon1Dovetail_1732:HG2_PB_SVrefine2Falcon2Bionano_1202:HG2_PB_SVrefine2Falcon1plusDovetail_6683:HG3_PB_HySA_4382:HG2_Ill_breakscan11_3271;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1865:HG2_Ill_MetaSV_2794:HG3_Ill_MetaSV_2934;NumExactMatchSVs=3;ClusterMaxShiftDist=0.136808;ClusterMaxSizeDiff=0.136808;ClusterMaxEditDist=0.210351;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=310;DistBack=19600;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=2:233845877-233845893;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3066.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:22:./.:21:8:8:9:1|0:0:13:22:0:0/1:19:11:0/1:4:33:.:.:.
chr2	233857865	HG4_Ill_GATKHCSBGrefine_1950	A	ATATATATATATATTATATATATAAATAAATATATATATTTATTTATATATATAATATATATAAATAAATAAATATATTTATTTATATATATATCATATATATAAATAAATATATATATTTATT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_1866:HG4_PB_pbsv_2780:HG4_PB_assemblyticsfalcon_14692:HG3_PB_assemblyticsfalcon_14925:HG4_Ill_GATKHCSBGrefine_1951:HG3_PB_SVrefine2Falcon1Dovetail_1733:HG4_PB_SVrefine2Falcon1Dovetail_1683:HG4_PB_SVrefine2PBcRDovetail_1474:HG2_PB_pbsv_2774:HG2_PB_HySA_5384:HG4_Ill_SVrefine2DISCOVARDovetail_2100:HG4_Ill_GATKHC_4705:HG4_Ill_GATKHCSBGrefine_1950:HG2_Ill_GATKHC_4635;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1866:HG4_Ill_SVrefine2DISCOVARDovetail_2100:HG4_Ill_GATKHC_4705:HG4_Ill_GATKHCSBGrefine_1950:HG2_Ill_GATKHC_4635;NumExactMatchSVs=5;ClusterMaxShiftDist=0.121457;ClusterMaxSizeDiff=0.097166;ClusterMaxEditDist=0.235294;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=123;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=118;REFWIDENED=2:233857799-233857916;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3067.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:24:./.:14:20:11:3:./.:8:0:2:4:0/1:19:9:./.:.:.:.:.:.
chr2	234084961	HG2_PB_SVrefine2Falcon2Bionano_1204	C	CGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGAATAGGCGAATGGATAGGTGGGTGGGTGGGTGGATGGATGGATGGATAGATAGATGGATGTGTGGGTGGGTGAATGGATGGATGGATGGATGGGTGGATAGGTGGATGGATGGGTGGATAGGTGGGTGAATGGGTGAATAGATGGATGGAGGGACGGATGGATGAATGGGTAGGTGGGTGGGCGGATGGGTGAATGGGTAGGTGGGTGGGCGGATGGATGGATGGATGAGTAGATGGATGGATGAACAGGAGAATGGGTGGATGGATGGATGGATGGATGAATGGATGAACAGATGGTTGGATGGATGAATAGGCGAATGGATAGGTGGGTGGGTGGATGGATGGATAGATGGATGGATGTGTGGGTGGGTGAATGGATGGATGGATGGGTGGATAGGTGGATGAATGGATGAATAGATGGAAGGATGGATAGATGGATGGATAGGTGAATGGGTAGGTGGGTGGGCAGATGGATGGATGGATGGATGGACGGATGGATGGATGGATGAGTAGATGAATGGATGAATAGGAGAATGGGTAGATGGGTGGGTGGATGGATGGATGTGTGGGTGGGTGGAGGGATGGATGGATGGATAAATG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1685:HG2_PB_SVrefine2PB10Xhap12_2061:HG3_PB_pbsv_2764:HG4_PB_assemblyticsfalcon_14697:HG2_PB_pbsv_2779:HG4_PB_HySA_4247:HG2_PB_SVrefine2Falcon1plusDovetail_6686:HG2_PB_SVrefine2PBcRplusDovetail_6196:HG2_PB_SVrefine2Falcon2Bionano_1204:HG4_PB_SVrefine2PBcRDovetail_1475:HG3_PB_SVrefine2PBcRDovetail_1387:HG3_Ill_SVrefine2DISCOVARDovetail_2082:HG3_PB_SVrefine2Falcon1Dovetail_1736;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1204:HG2_PB_SVrefine2PBcRplusDovetail_6196;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0466563;ClusterMaxSizeDiff=0.0462342;ClusterMaxEditDist=0.250584;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=652;DistBack=3275;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=183;REFWIDENED=2:234084963-234085145;PctSeqSimilarity=0.9686;PctSizeSimilarity=0.9923;PctRecOverlap=0.7243;SizeDiff=5;StartDistance=-177;EndDistance=-177;GTMatch=0;TruScore=89;MatchId=3068.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:67:1/1:4:25:1:25:./.:19:158:12:226:1/1:0:23:1/1:4:97:.:.:.
chr2	235423225	HG2_PB_SVrefine2Falcon2Bionano_1210	G	GTGTGTGTGGTGTAGTGTGTGTGGTGTGTGTGTAGTGTGGTGTGTGTGTGGTAGGTTGTGTACCGTGGTGTGTGCATGTGGTGTGTGTGGTGTGGTGTATGTGTCTGTGATGTGGTGTGTATGTTTGTGATGTGTGTGTGGTGTAGTGTGTGTGGTGTGTGTGTAGTGTGGTGTGTGTGTGGTAGGTAGTGTGTGTGGTGTGTGTGTGGTGTGGTGTGTGTGTGGGGGGTGTGGTGTGTGTGTGTAGTGTGGTGTGTATTCAACCAATTCATAAGGATGGTTGAATTCCAGGAAACAGTAATGTAATGCCATGCTCAGTGGTGTGTTTGTGTGTGTGGGGGTGGTGGTGTGCGTGTGTGTGTGGCGTAGTGTGTATGTGTGTGTGGTAGGTTATGTGTGTGCATGTGGTGTATGCATGTGGTGAGTGTGCCATGCTCAGTGGTGTGTTTGTGTGAGTGTGGAGTGTGGTGTGTATGTGTGGTGCAGTGTATGTGGTGTGGTATGTACGTGTGTGTGGGGTATGTATGTGTGTGGGGGGTGTGTGTGTGTTGTGTGTGTGTAAGTTTGTGGTGTAGTGTATATGTGAGGGGGTGTGGTGTATGTGTGTGGTGTGTATGTGTGTGATGGGTGGTGTGTGTGGTGTGGTCTGTTTGTGTGTGTGGTAGGTAGTGTGTATGGTGTGCATGTGGTGTGTGTGTGTGTGATGTGGTGTGTTTGTGTGTGTGGTAGGTGATGTGTGTGGTGTGTGTATGGTGTGGTGTCCGTGTGTGTGTGGTGTGGTGCAGTGTGTGCATGTGGCATGTGTGTGTGTGGTGTGGTGTGTATATGTGTGGTAGGTGGTGTGGGTGGTGTGTGTGTTTGTGGTGTGGTGTGTGGTGTGGTCTGTGTGGTGTAGTGTGTATGCATGTGGTAGGTGGTGTAGGTGGTGTGTGTGTGGTGTGGTATGTGGTGTGGTGTGTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1692:HG4_PB_HySA_4271:HG3_PB_pbsv_2772:HG2_Ill_breakscan11_3272:HG4_PB_pbsv_2793:HG4_PB_HySA_4269:HG2_PB_pbsv_2787:HG2_PB_HySA_5415:HG2_PB_SVrefine2Falcon1plusDovetail_6694:HG3_PB_SVrefine2Falcon1Dovetail_1744:HG4_PB_SVrefine2PBcRDovetail_1481:HG4_Ill_SVrefine2DISCOVARDovetail_2110:HG2_PB_SVrefine2PBcRplusDovetail_6203:HG2_PB_SVrefine2Falcon2Bionano_1210:HG2_Ill_SVrefine2DISCOVARplusDovetail_7324:HG3_PB_SVrefine2PBcRDovetail_1395;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7324:HG2_PB_SVrefine2Falcon2Bionano_1210:HG2_PB_SVrefine2PBcRplusDovetail_6203:HG4_Ill_SVrefine2DISCOVARDovetail_2110;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0878788;ClusterMaxSizeDiff=0.0848485;ClusterMaxEditDist=0.265193;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=959;DistBack=-258;DistForward=-1;DistMin=-258;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=259;REFWIDENED=2:235423226-235423484;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9958;PctRecOverlap=0.8269;SizeDiff=4;StartDistance=-164;EndDistance=-164;GTMatch=0;TruScore=93;MatchId=3070.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:2:21:1:8:./.:247:350:247:296:./.:0:0:1/1:5:142:.:1000:.
chr2	236098960	HG2_PB_SVrefine2Falcon1plusDovetail_6702	A	ACCAGTGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_5439:HG3_PB_pbsv_2783:HG2_PB_PB10Xdip_16985:HG2_PB_pbsv_2798:HG2_PB_assemblyticsfalcon_14982:HG2_PB_SVrefine2PBcRplusDovetail_6211:HG2_PB_SVrefine2Falcon1plusDovetail_6702:HG2_PB_SVrefine2Falcon2Bionano_1217:HG2_PB_SVrefine2PB10Xhap12_2077:HG2_Ill_breakscan11_3275;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6702;NumExactMatchSVs=1;ClusterMaxShiftDist=0.175;ClusterMaxSizeDiff=0.175;ClusterMaxEditDist=0.227074;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=-3;DistForward=76148;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=2:236098961-236098973;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3071.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:47:37:0|1:40:5:2:24:./.:0:4:17:0:0/1:33:8:./.:6:50:.:.:.
chr2	236506335	HG2_Ill_SVrefine2DISCOVARplusDovetail_7335	C	CTGTGTGGAGCGTGCACGCGCTCCCGTGTTTCCTGTGTGTGGAGCGTGCACGCGCTCCCGTGTTTCCTTTGTGTGGAGCGTGCACGCGCTCCCGTGTTTCCTTTGTGTGGAGCGTGCACGCGCTCCCGTGTTTCCTGTGTGTGGAGCGTGCACGCGCTCCCGTGTTTCCTTTGTGTGGAGCGTGCACGCGCTCCCGTGTTTCCTTTGTGTGGAGCGTGCACGCGCTCCCGTGTTTCCTT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7335:HG4_PB_pbsv_2807:HG2_PB_pbsv_2801:HG4_PB_HySA_4295:HG3_PB_pbsv_2787:HG4_PB_SVrefine2Falcon1Dovetail_1704:HG3_PB_SVrefine2Falcon1Dovetail_1755:HG2_PB_SVrefine2Falcon1plusDovetail_6705:HG2_PB_SVrefine2Falcon2Bionano_1219;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7335:HG2_PB_SVrefine2Falcon2Bionano_1219;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0627615;ClusterMaxSizeDiff=0.0585774;ClusterMaxEditDist=0.274841;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=238;DistBack=24629;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=435;REFWIDENED=2:236506336-236506770;PctSeqSimilarity=0.9973;PctSizeSimilarity=1;PctRecOverlap=0.4686;SizeDiff=0;StartDistance=-127;EndDistance=-127;GTMatch=0;TruScore=82;MatchId=3074.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:41:0|1:29:8:1:18:./.:2:0:0:0:0/1:8:5:./.:.:.:.:.:.
chr2	236711272	HG4_PB_SVrefine2PBcRDovetail_1491	A	ATGGTGGTGATGATGGTTGTGGTGATGATGATGGTTGTGGTTGTGGTGATGATGGTTGTGGTGGTGATGATGGTTGTGATAATGATGGTTGTGGTTGTGATGGTGATGGTTGTGATGGTGGTGGTGATGGTTGTGGTTGTGATGATGGTTGTGGTTGTGATGGTGATGATGGTTGTGATGGTGGTGGTGGTGGAGATGGTTGTGGTTGTGATGATGGTTATGGTTGTGATGATGGTTGTGATGGTGATGATGCTGCTTGTGGTTGTGATGGTGATGATGGTTGTGATGGTGTGATGGTTGTGGTTGTGGTTATGATGGTTGTAATGGTGGTGATGATGGTTGTGATGATGGTTGTGGTTGTGATGGTTGTGATGGTGGTGATGGTTGTGGTTGTGATGGTGATGGTGATGGCTGTGGTGATGATGGTTGTGATGGTGGTGATGATGGTCGTGGTGATGGTTGTGATGGTGGTGATGATTGTGGTTGTGATGGTGATGATGGTTGTGGTTGTGGTGGTGATGATTGTGATGGTGATGATGCTGGTTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2082:HG2_PB_HySA_5451:HG2_PB_pbsv_2805:HG4_PB_HySA_4302:HG4_PB_HySA_4303:HG2_PB_PB10Xdip_16990:HG4_PB_pbsv_2812:HG4_PB_SVrefine2Falcon1Dovetail_1707:HG3_PB_SVrefine2PBcRDovetail_1405:HG3_Ill_SVrefine2DISCOVARDovetail_2097:HG2_PB_SVrefine2Falcon2Bionano_1221:HG2_PB_SVrefine2Falcon1plusDovetail_6706:HG3_PB_SVrefine2Falcon1Dovetail_1757:HG4_PB_SVrefine2PBcRDovetail_1491:HG2_PB_SVrefine2PBcRplusDovetail_6215;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2082:HG4_PB_SVrefine2PBcRDovetail_1491:HG2_PB_SVrefine2PBcRplusDovetail_6215;NumExactMatchSVs=3;ClusterMaxShiftDist=0.27566;ClusterMaxSizeDiff=0.27566;ClusterMaxEditDist=0.316617;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=545;DistBack=11356;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=594;REFWIDENED=2:236711273-236711866;PctSeqSimilarity=0.9555;PctSizeSimilarity=0.982;PctRecOverlap=0.3243;SizeDiff=-10;StartDistance=-370;EndDistance=-370;GTMatch=0;TruScore=75;MatchId=3075.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:78:1/1:3:22:2:20:1/1:15:948:9:605:./.:1:5:./.:3:53:.:.:.
chr2	237757878	HG3_Ill_MetaSV_2941	T	TTCTATTATTTATTTTATTTTATTTTATTTTATTTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCTCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCC	20	PASS	ClusterIDs=HG2_PB_pbsv_2813:HG3_PB_assemblyticsfalcon_14979:HG4_PB_pbsv_2819:HG4_PB_HySA_4313:HG2_PB_assemblyticsfalcon_14997:HG2_PB_assemblyticsPBcR_14602:HG2_PB_SVrefine2Falcon1plusDovetail_6709:HG3_PB_HySA_4431:HG2_PB_HySA_5459:HG4_PB_SVrefine2PBcRDovetail_1495:HG4_Ill_MetaSV_2892:HG4_Ill_GATKHCSBGrefine_1975:HG3_PB_SVrefine2PBcRDovetail_1407:HG3_PB_SVrefine2Falcon1Dovetail_1762:HG3_Ill_Spiral_3088:HG3_Ill_SVrefine2DISCOVARDovetail_2105:HG3_Ill_MetaSV_2941:HG3_Ill_GATKHCSBGrefine_1907:HG2_PB_SVrefine2PBcRplusDovetail_6218:HG2_PB_SVrefine2PB10Xhap12_2084:HG2_PB_SVrefine2Falcon2Bionano_1223:HG2_Ill_GATKHCSBGrefine_1887:HG4_Ill_SVrefine2DISCOVARDovetail_2129:HG2_Ill_SVrefine2DISCOVARplusDovetail_7340:HG2_Ill_MetaSV_2802:HG2_10X_SVrefine210Xhap12_2144:HG4_PB_SVrefine2Falcon1Dovetail_1711:HG2_PB_PB10Xdip_16994:HG3_PB_pbsv_2795;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1887:HG2_PB_SVrefine2Falcon2Bionano_1223:HG2_PB_SVrefine2PB10Xhap12_2084:HG2_PB_SVrefine2PBcRplusDovetail_6218:HG3_Ill_GATKHCSBGrefine_1907:HG3_Ill_MetaSV_2941:HG3_Ill_SVrefine2DISCOVARDovetail_2105:HG3_Ill_Spiral_3088:HG3_PB_SVrefine2Falcon1Dovetail_1762:HG3_PB_SVrefine2PBcRDovetail_1407:HG4_Ill_GATKHCSBGrefine_1975:HG4_Ill_MetaSV_2892:HG4_PB_SVrefine2PBcRDovetail_1495;NumExactMatchSVs=13;ClusterMaxShiftDist=0.236559;ClusterMaxSizeDiff=0.236559;ClusterMaxEditDist=0.315412;PBcalls=18;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=144;DistBack=1112;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:237757879-237757893;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3076.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:1/1:0:25:0:34:1/1:0:10:0:15:1/1:0:17:./.:.:.:.:.:.
chr2	237796238	HG3_Ill_MetaSV_2942	T	TGCTTATTTTTTTCGGGACATATTTCTAGGGGTGAGGCTGCGTGGATCAAGGAATATTGGCTTTTTTTCTGGGATCTTAACACATAGTGCTAAAAATATGTCTATAGAGTGCCCAACCAATGTGCTAATTTACCAGGAAAAATAATCAGACTCATTGTGTAGACCTCCAGATTCCAGTTGTTTGATTTACGTTTCTTTAAAACTTTTGAACAAATGTTGGCTTGAAATAGACAAGAAGTGAAATAAAAAGTTCTGCCACAGATATATACAAGATTCACTCTTTCTTACACTTTCTATTTTATGAGGTAACATTTTTCAATTTGCCAAACTGCATAATGCTAGATTGCACTGCATGAAAATGATTTAAAAGAGCTTCAGACTCCTAAGTACTTAGGCAAGTCTCTTCCGAGTGTATGGGCGACACAGACATCTGGACAGCATGCCACTTCTGAAGGCCTTGGCCATAAAACAGCCTCAGATTTGGTTTCCAGCGTTAGGCATACAAAGGTTCATTCAAATTGCAATGGATAAAATAATTTGTGCGTTTATATTATGTTAACCCGAGGTTATCGCTGACTGCAGGGCTGTGATTTTTCCCTTTGGTCAAGTCTTCCAGATAAATCAGACTGTGCCATCAGCGATGATCTTGTTAGCTTCCACTGAATAGGTTTTCTCTTTCGGTCTTGACATTCCTACGTCTTTATGTAACTTCCTGTTAACTAAGACAAAAATAAATACATGCATTCCCCATGCGAGGAAAGAGAGAAAGACTAGTAGAGAAAGTGACGTTTATACTTGCAGAGAAAACTCCTGATTAAAGATAGAAAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_2814:HG3_PB_pbsv_2796:HG4_PB_pbsv_2820:HG2_PB_assemblyticsfalcon_15000:HG3_PB_assemblyticsfalcon_14982:HG2_PB_assemblyticsPBcR_14605:HG4_PB_HySA_4315:HG3_PB_HySA_4433:HG2_PB_SVrefine2Falcon1plusDovetail_6710:HG3_PB_SVrefine2Falcon1Dovetail_1763:HG4_PB_SVrefine2Falcon1Dovetail_1712:HG4_Ill_MetaSV_2893:HG3_PB_SVrefine2PBcRDovetail_1408:HG3_Ill_SVrefine2DISCOVARDovetail_2106:HG3_Ill_MetaSV_2942:HG3_Ill_GATKHCSBGrefine_1908:HG2_Ill_SVrefine2DISCOVARplusDovetail_7341:HG2_Ill_MetaSV_2803:HG2_10X_SVrefine210Xhap12_2145:HG4_PB_SVrefine2PBcRDovetail_1496:HG4_Ill_GATKHCSBGrefine_1976:HG2_PB_SVrefine2PBcRplusDovetail_6219:HG2_PB_SVrefine2PB10Xhap12_2085:HG4_Ill_SVrefine2DISCOVARDovetail_2130:HG2_PB_SVrefine2Falcon2Bionano_1224:HG2_PB_HySA_5462:HG2_Ill_breakscan11_3276:HG2_PB_PB10Xdip_16995;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2145:HG2_Ill_MetaSV_2803:HG2_Ill_SVrefine2DISCOVARplusDovetail_7341:HG3_Ill_GATKHCSBGrefine_1908:HG3_Ill_MetaSV_2942:HG3_Ill_SVrefine2DISCOVARDovetail_2106:HG3_PB_SVrefine2PBcRDovetail_1408:HG4_Ill_MetaSV_2893;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0781065;ClusterMaxSizeDiff=0.0757396;ClusterMaxEditDist=0.210526;PBcalls=18;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=828;DistBack=4130;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=2:237796239-237796241;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9988;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3077.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:1/1:0:24:0:22:1/1:0:19:0:18:1/1:0:31:1/1:5:78:.:854:.
chr2	238213970	HG3_PB_SVrefine2Falcon1Dovetail_1766	A	GCCTGTAATCCCAGCAACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGAGGCTGAGCGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCACTGCAACTCCAGCCTGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAACTAT	10	PASS	ClusterIDs=HG3_PB_HySA_4437:HG3_PB_assemblyticsfalcon_14987:HG3_PB_SVrefine2Falcon1Dovetail_1766:HG3_PB_pbsv_2799:HG2_PB_assemblyticsfalcon_15003:HG2_PB_pbsv_2818:HG2_PB_HySA_5465:HG2_PB_SVrefine2Falcon1plusDovetail_6711;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1766:HG3_PB_assemblyticsfalcon_14987;NumExactMatchSVs=2;ClusterMaxShiftDist=0.216124;ClusterMaxSizeDiff=0.216124;ClusterMaxEditDist=0.243568;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=301;DistBack=55;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=2:238213971-238213969;PctSeqSimilarity=0.98;PctSizeSimilarity=0.971;PctRecOverlap=0.926;SizeDiff=-9;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=95;MatchId=3078.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:39:1|0:3:31:29:1:./.:0:4:21:0:0/1:25:12:0/1:11:32:.:.:.
chr2	238336033	HG2_Ill_GATKHC_4706	A	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG3_PB_pbsv_2800:HG2_Ill_manta_816:HG3_Ill_GATKHC_4822:HG3_Ill_GATKHCSBGrefine_1910:HG2_Ill_GATKHC_4706:HG2_Ill_GATKHCSBGrefine_1893:HG2_Ill_Krunchall_4008;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1893:HG2_Ill_GATKHC_4706:HG3_Ill_GATKHCSBGrefine_1910:HG3_Ill_GATKHC_4822;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0900901;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.216216;PBcalls=1;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=62574;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=153;REFWIDENED=2:238335997-238336149;PctSeqSimilarity=0.9655;PctSizeSimilarity=0.9464;PctRecOverlap=0.6667;SizeDiff=-3;StartDistance=17;EndDistance=17;GTMatch=0;TruScore=85;MatchId=3079.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:31:0|1:29:2:2:28:./.:3:2:6:10:0/1:13:19:./.:.:.:.:.:.
chr2	238366373	HG2_Ill_GATKHC_4707	A	ATGGATGGGTGGATGAGTGAATGGGTGAATGAGTGGGTGGGTGGATGGGTGGCTGGGTGGT	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_14989:HG3_PB_pbsv_2801:HG2_PB_HySA_5468:HG2_PB_PB10Xdip_16998:HG3_Ill_svaba_3635:HG3_Ill_GATKHC_4823:HG2_Ill_svaba_3545:HG2_Ill_GATKHC_4707;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_4707:HG2_Ill_svaba_3545:HG3_Ill_GATKHC_4823:HG3_Ill_svaba_3635;NumExactMatchSVs=4;ClusterMaxShiftDist=0.214286;ClusterMaxSizeDiff=0.178571;ClusterMaxEditDist=0.285714;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=4156;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=42;REFWIDENED=2:238366372-238366416;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3080.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:37:0|1:28:4:1:32:./.:6:30:28:0:0/1:8:9:./.:.:.:.:.:.
chr2	238519560	HG3_PB_SVrefine2Falcon1Dovetail_1769	T	TCACGCTTGATTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAGCTCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1717:HG3_PB_pbsv_2806:HG2_PB_HySA_5472:HG2_PB_SVrefine2PBcRplusDovetail_6221:HG2_PB_assemblyticsPBcR_14614:HG2_PB_SVrefine2Falcon2Bionano_1227:HG2_PB_SVrefine2Falcon1plusDovetail_6714:HG2_PB_pbsv_2825:HG3_PB_SVrefine2Falcon1Dovetail_1769:HG3_PB_assemblyticsfalcon_14995;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1769;NumExactMatchSVs=1;ClusterMaxShiftDist=0.296774;ClusterMaxSizeDiff=0.296774;ClusterMaxEditDist=0.348387;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=331;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:238519561-238519575;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.9851;PctRecOverlap=0.9822;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3081.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:33:0|1:15:1:0:29:0|1:19:0:0:6:0/1:23:7:0/1:6:26:.:.:.
chr2	239484598	HG2_Ill_GATKHC_4717	G	GGCATTCTCCCGTGTCCCTTTAGCCGCTGCCCCATTCCCCTGCATCCTTCAGCCGCTGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_2832:HG4_Ill_svaba_3644:HG4_Ill_GATKHC_4788:HG4_Ill_GATKHCSBGrefine_1989:HG4_Ill_250bpfermikitraw_3958:HG3_Ill_svaba_3646:HG3_Ill_GATKHCSBGrefine_1915:HG3_Ill_250bpfermikitraw_3851:HG2_Ill_svaba_3554:HG2_Ill_manta_821:HG2_Ill_SpiralSDKrefine_9551:HG2_Ill_Krunchall_4016:HG2_Ill_GATKHC_4717:HG2_Ill_GATKHCSBGrefine_1898:HG2_Ill_250bpfermikitraw_3928:HG2_Ill_150bpfermikitraw_3662:HG2_PB_HySA_5485:HG2_PB_PB10Xdip_17028;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3662:HG2_Ill_250bpfermikitraw_3928:HG2_Ill_GATKHCSBGrefine_1898:HG2_Ill_GATKHC_4717:HG2_Ill_Krunchall_4016:HG2_Ill_SpiralSDKrefine_9551:HG2_Ill_manta_821:HG2_Ill_svaba_3554:HG3_Ill_250bpfermikitraw_3851:HG3_Ill_GATKHCSBGrefine_1915:HG3_Ill_svaba_3646:HG4_Ill_250bpfermikitraw_3958:HG4_Ill_GATKHCSBGrefine_1989:HG4_Ill_GATKHC_4788:HG4_Ill_svaba_3644;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.119658;PBcalls=3;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=7;DistForward=22;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=165;REFWIDENED=2:239484576-239484740;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3082.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:46:./.:0:0:0:2:./.:0:0:0:6:1/1:0:24:./.:.:.:.:.:.
chr2	239883393	HG2_PB_SVrefine2PB10Xhap12_2098	T	TGAAAAAGGACTAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2161:HG3_PB_pbsv_2824:HG4_PB_assemblyticsfalcon_14772:HG2_PB_pbsv_2838:HG2_PB_assemblyticsPBcR_14630:HG2_PB_PB10Xdip_17045:HG4_PB_SVrefine2Falcon1Dovetail_1729:HG2_PB_SVrefine2PBcRplusDovetail_6230:HG2_PB_SVrefine2PB10Xhap12_2098:HG2_PB_SVrefine2Falcon2Bionano_1234:HG2_PB_SVrefine2Falcon1plusDovetail_6723:HG2_Ill_breakscan11_3278:HG2_PB_HySA_5501;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2098:HG2_PB_SVrefine2PBcRplusDovetail_6230;NumExactMatchSVs=2;ClusterMaxShiftDist=0.13273;ClusterMaxSizeDiff=0.13273;ClusterMaxEditDist=0.206395;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=330;DistBack=17601;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=2:239883394-239883408;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3085.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:1:27:0:10:./.:0:4:1:10:1/1:0:32:1/1:2:67:.:.:.
chr2	240046197	HG3_Ill_SVrefine2DISCOVARDovetail_2123	G	GCCACGTTATATGACATTCCGGCGTGCCGGCGTGTGGCCGTGCGTCATTCCACGTTATATGACATTCCAGTGTGCCGGCATGTGGCCGCACGTCATTCCACGTTATATGACATTCCGGCGTGCCGGCATGTGGCCGCACATCATTCCACGTTATATGACATTCCGGTGTGCCGGCGTGTGGCCGCGTTATATGACATTCCATGTTATGTGACATTCCGGTGTGCTGGCGTGTGGCTGCGTTATATGACATTCCATGTTATGTGACATTCCGGTGTGCCGGCGTGTGGCCGCGTTATATGACATTCCAGTGTGCCGGCGTGTGGCCGCGTTATATGACATTCCGGTGTGCCAGCGTGTGGCCGTGTTATATGACATTCCATGTTATGTGACATTCTGGTGTGCTGGCGTGTGGCTACGTTATATGACATT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6725:HG4_PB_HySA_4349:HG2_PB_pbsv_2842:HG4_PB_pbsv_2850:HG3_PB_pbsv_2828:HG3_PB_HySA_4466:HG4_PB_SVrefine2Falcon1Dovetail_1731:HG3_PB_SVrefine2PBcRDovetail_1422:HG3_PB_SVrefine2Falcon1Dovetail_1781:HG3_Ill_SVrefine2DISCOVARDovetail_2123:HG2_PB_SVrefine2Falcon2Bionano_1237;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6725:HG4_PB_SVrefine2Falcon1Dovetail_1731:HG3_PB_SVrefine2PBcRDovetail_1422:HG3_PB_SVrefine2Falcon1Dovetail_1781:HG3_Ill_SVrefine2DISCOVARDovetail_2123:HG2_PB_SVrefine2Falcon2Bionano_1237;NumExactMatchSVs=6;ClusterMaxShiftDist=0.120941;ClusterMaxSizeDiff=0.114222;ClusterMaxEditDist=0.250832;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=428;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=538;REFWIDENED=2:240046198-240046735;PctSeqSimilarity=0.9677;PctSizeSimilarity=0.9953;PctRecOverlap=0.4056;SizeDiff=2;StartDistance=-254;EndDistance=-254;GTMatch=0;TruScore=78;MatchId=3086.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:44:0|1:34:1:1:23:./.:0:18:3:3:./.:6:2:0/1:2:13:.:.:.
chr2	240072219	HG2_PB_SVrefine2PBcRplusDovetail_6232	G	GATACAGCAGCAGGAAGTCTCACCACGCTGCACCTCCTCAAGTATATACCACACCTTTAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7355:HG4_PB_assemblyticsfalcon_14777:HG2_PB_pbsv_2843:HG4_Ill_GATKHC_4802:HG3_PB_assemblyticsfalcon_15018:HG3_Ill_GATKHC_4846:HG3_Ill_GATKHCSBGrefine_1923:HG3_Ill_250bpfermikitraw_3863:HG2_Ill_GATKHC_4730:HG2_Ill_GATKHCSBGrefine_1902:HG3_PB_HySA_4467:HG2_PB_HySA_5505:HG2_PB_PB10Xdip_17052:HG4_PB_SVrefine2PBcRDovetail_1504:HG4_Ill_SVrefine2DISCOVARDovetail_2145:HG3_PB_SVrefine2PBcRDovetail_1423:HG3_Ill_SVrefine2DISCOVARDovetail_2124:HG2_PB_SVrefine2PBcRplusDovetail_6232:HG2_PB_SVrefine2PB10Xhap12_2103:HG2_PB_SVrefine2Falcon2Bionano_1238:HG2_PB_SVrefine2Falcon1plusDovetail_6726;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7355:HG4_PB_SVrefine2PBcRDovetail_1504:HG4_Ill_SVrefine2DISCOVARDovetail_2145:HG3_PB_SVrefine2PBcRDovetail_1423:HG3_Ill_SVrefine2DISCOVARDovetail_2124:HG2_PB_SVrefine2PBcRplusDovetail_6232:HG2_PB_SVrefine2PB10Xhap12_2103:HG2_PB_SVrefine2Falcon2Bionano_1238:HG2_PB_SVrefine2Falcon1plusDovetail_6726;NumExactMatchSVs=9;ClusterMaxShiftDist=0.129032;ClusterMaxSizeDiff=0.0967742;ClusterMaxEditDist=0.208;PBcalls=12;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=59;DistBack=19973;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=452;REFWIDENED=2:240072220-240072671;PctSeqSimilarity=0.9905;PctSizeSimilarity=1;PctRecOverlap=0.2373;SizeDiff=0;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=74;MatchId=3087.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:64:1/1:2:27:1:22:./.:10:0:7:1:./.:18:1:./.:.:.:.:.:.
chr2	240449062	HG2_PB_SVrefine2PB10Xhap12_2107	T	TGGTGCACCATCACGAAGGCATGCCATCACGAGGGTGCACCGTCACGAGAGTGCACTGTCACGAGGGTGCACCATCACGAAGGCGTGCCATCACGAGGGTGCACCGTCACGAGAGTGCACTGTCACGAGGGTGCACCATCACGAAGGCGTGCCATCACGAGGGTGCACCGTCACGAGAGTGCACTGTCACGAGGGTGCACCATCACGAAGGCGTGCCATCACGAGGGTGCACCGTCACGAGAGTGCACTGTCACGAGGGTGCACCATCACGAAGGCGTGCCATCACGAGGGTGCACCGTCACGAGAGTGCACTGTCACGAG	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_17055:HG3_PB_pbsv_2837:HG3_PB_assemblyticsfalcon_15023:HG2_PB_SVrefine2Falcon1plusDovetail_6731:HG2_PB_pbsv_2852:HG3_PB_SVrefine2Falcon1Dovetail_1784:HG4_PB_pbsv_2857:HG2_PB_pbsv_2851:HG3_PB_SVrefine2PBcRDovetail_1427:HG2_PB_SVrefine2Falcon2Bionano_1241:HG2_PB_SVrefine2PBcRplusDovetail_6236:HG2_PB_SVrefine2PB10Xhap12_2107:HG4_PB_SVrefine2Falcon1Dovetail_1734;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2107:HG2_PB_SVrefine2PBcRplusDovetail_6236;NumExactMatchSVs=2;ClusterMaxShiftDist=0.189112;ClusterMaxSizeDiff=0.189112;ClusterMaxEditDist=0.285714;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=320;DistBack=17596;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=731;REFWIDENED=2:240449063-240449793;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3088.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:106:1/1:1:17:0:15:./.:0:1:0:1:./.:0:4:./.:1:6:.:.:.
chr2	240524519	HG4_Ill_GATKHCSBGrefine_1999	G	GTCCAGCACCCTCCCTGGGACGAGGCCTTCCTGTTAGACACAGCAGCGAGGGGCTCCCTCAGCCTCTGT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3677:HG3_PB_pbsv_2839:HG2_PB_pbsv_2854:HG4_PB_pbsv_2861:HG3_PB_HySA_4474:HG4_Ill_scalpel_2749:HG4_Ill_GATKHC_4815:HG4_Ill_GATKHCSBGrefine_1999:HG4_Ill_250bpfermikitraw_3979:HG3_Ill_svaba_3674:HG3_Ill_scalpel_2931:HG3_Ill_GATKHC_4856:HG3_Ill_GATKHCSBGrefine_1929:HG3_Ill_250bpfermikitraw_3872:HG2_Ill_svaba_3580:HG2_Ill_scalpel_2819:HG2_Ill_GATKHC_4742:HG2_Ill_GATKHCSBGrefine_1906:HG2_Ill_250bpfermikitraw_3951;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3677:HG4_Ill_scalpel_2749:HG4_Ill_GATKHC_4815:HG4_Ill_GATKHCSBGrefine_1999:HG4_Ill_250bpfermikitraw_3979:HG3_Ill_svaba_3674:HG3_Ill_scalpel_2931:HG3_Ill_GATKHC_4856:HG3_Ill_GATKHCSBGrefine_1929:HG3_Ill_250bpfermikitraw_3872:HG2_Ill_svaba_3580:HG2_Ill_scalpel_2819:HG2_Ill_GATKHC_4742:HG2_Ill_GATKHCSBGrefine_1906:HG2_Ill_250bpfermikitraw_3951;NumExactMatchSVs=15;ClusterMaxShiftDist=0.057554;ClusterMaxSizeDiff=0.0431655;ClusterMaxEditDist=0.228571;PBcalls=4;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=16;DistForward=126;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=273;REFWIDENED=2:240524374-240524646;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3089.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:0|1:28:1:2:27:./.:7:0:3:5:0/1:22:7:./.:.:.:.:.:.
chr2	241047588	HG2_PB_SVrefine2Falcon2Bionano_1254	T	TCCTGCACAGGGAGTGCTCCACGCCTGCACAGGAGCTGCATCAACAGGAGGGAACGTCCCTGCACAGGGAGTGCTCCACACCTGCATGGGAGCTGCATCAACAGGAGGGAACGTCCCTGCACAGGGAGTGCTCCACACCTGCATGGGAGCTGCATCAACAGGAGGGAACGTCCCTGCACAGGGAGTGCTCCACGCCTGCATGGGAGCTGCATCAACAGGAGGGAACGTCCCTGCACAGGGAGTGCTCCACGCCTGCATGGGAGCTGCATCAACAGGAGGGAATGTCCTCACGCAAGGAGTGCTCGACACCTGTGTGGGGGCTGCATCAAAAGGAGGAAACATTCCCCACATAGGGAGTGCTCCACGCCTGCACAGGAGCTGCATCAACAGGAGGGAACGTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2118:HG2_PB_HySA_5522:HG4_PB_pbsv_2881:HG4_PB_HySA_4383:HG4_PB_SVrefine2PBcRDovetail_1521:HG2_PB_SVrefine2Falcon2Bionano_1254:HG4_PB_SVrefine2Falcon1Dovetail_1743:HG3_PB_SVrefine2Falcon1Dovetail_1794:HG2_PB_SVrefine2Falcon1plusDovetail_6740;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1254:HG4_PB_SVrefine2PBcRDovetail_1521;NumExactMatchSVs=2;ClusterMaxShiftDist=0.167116;ClusterMaxSizeDiff=0.167116;ClusterMaxEditDist=0.28129;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=400;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=745;REFWIDENED=2:241047589-241048333;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=0.9252;SizeDiff=0;StartDistance=-30;EndDistance=-30;GTMatch=0;TruScore=97;MatchId=3091.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:58:./.:10:18:25:15:./.:1:0:0:3:./.:2:3:./.:1:4:.:.:.
chr2	241130090	HG3_Ill_GATKHC_4868	A	ACCCTTCCTGTGGGTCTCCCGCTTTCCTCGGAGGCTGCAGTCCCGCGGGACGGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3279:HG2_PB_pbsv_2873:HG2_PB_HySA_5524:HG3_PB_pbsv_2855:HG3_Ill_svaba_3681:HG2_PB_SVrefine2PB10Xhap12_2120:HG3_Ill_manta_654:HG3_Ill_Krunchall_4029:HG3_Ill_GATKHC_4868:HG3_Ill_GATKHCSBGrefine_1936:HG3_Ill_Cortex_2070:HG3_Ill_250bpfermikitraw_3882:HG2_Ill_svaba_3588:HG2_Ill_manta_828:HG2_Ill_SpiralSDKrefine_9578:HG2_Ill_SVrefine2DISCOVARplusDovetail_7368:HG2_Ill_Krunchall_4038:HG2_Ill_GATKHC_4757:HG2_Ill_GATKHCSBGrefine_1914:HG2_Ill_Cortex_4788:HG2_Ill_250bpfermikitraw_3961:HG2_Ill_150bpfermikitraw_3684:HG2_10X_SVrefine210Xhap12_2194:HG2_PB_SVrefine2PBcRplusDovetail_6248;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2194:HG2_Ill_150bpfermikitraw_3684:HG2_Ill_250bpfermikitraw_3961:HG2_Ill_Cortex_4788:HG2_Ill_GATKHCSBGrefine_1914:HG2_Ill_GATKHC_4757:HG2_Ill_Krunchall_4038:HG2_Ill_SVrefine2DISCOVARplusDovetail_7368:HG2_Ill_SpiralSDKrefine_9578:HG2_Ill_manta_828:HG2_Ill_svaba_3588:HG3_Ill_250bpfermikitraw_3882:HG3_Ill_Cortex_2070:HG3_Ill_GATKHCSBGrefine_1936:HG3_Ill_GATKHC_4868:HG3_Ill_Krunchall_4029:HG3_Ill_manta_654:HG3_Ill_svaba_3681;NumExactMatchSVs=18;ClusterMaxShiftDist=0.18018;ClusterMaxSizeDiff=0.162162;ClusterMaxEditDist=0.258621;PBcalls=5;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=53;DistBack=9098;DistForward=3785;DistMin=3785;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=2:241130091-241130126;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3093.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:47:0|1:27:2:7:42:1|0:1:27:11:0:0/1:16:23:./.:.:.:.:.:.
chr2	241257962	HG2_PB_SVrefine2Falcon2Bionano_1260	T	TGCACTTGACTGACTACTGGGGAGTGGGGAACTTGGTGGAGAGAGAAACTCGGGGAAGTACTGAGCACTGACCGAGTACTGGGGAGTGGGGCACTTGGTGGAGAGAGAAACTTGGGGAAGTACTGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1260:HG2_PB_pbsv_2879:HG4_PB_HySA_4394:HG4_PB_SVrefine2Falcon1Dovetail_1748:HG2_PB_HySA_5531:HG3_PB_HySA_4495:HG4_PB_pbsv_2888:HG3_PB_SVrefine2Falcon1Dovetail_1799:HG3_PB_pbsv_2860;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1260:HG3_PB_SVrefine2Falcon1Dovetail_1799;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.0629921;ClusterMaxEditDist=0.29249;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=125;DistBack=-1;DistForward=28280;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=318;REFWIDENED=2:241257963-241258280;PctSeqSimilarity=0.9895;PctSizeSimilarity=0.992;PctRecOverlap=0.104;SizeDiff=1;StartDistance=-112;EndDistance=-112;GTMatch=0;TruScore=69;MatchId=3094.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:33:0|1:24:0:0:27:./.:2:1:4:0:0/0:24:0:./.:.:.:.:.:.
chr2	241352657	HG4_Ill_150bpfermikitraw_3852	T	TCAAGTCCGGAGGAGGCTGAGCTGCAGTACCCCCCAAGTCCGGAGTAGGCTGAGCTGCAGTACCCCC	20	PASS	ClusterIDs=HG2_PB_HySA_5532:HG2_PB_pbsv_2884:HG4_PB_HySA_4398:HG4_Ill_manta_714:HG4_Ill_GATKHC_4836:HG4_Ill_GATKHCSBGrefine_2012:HG4_Ill_150bpfermikitraw_3852:HG2_Ill_manta_831:HG2_Ill_Krunchall_4044:HG2_Ill_GATKHC_4768:HG2_Ill_GATKHCSBGrefine_1918:HG2_Ill_250bpfermikitraw_3966:HG2_Ill_150bpfermikitraw_3690:HG4_Ill_svaba_3684:HG2_Ill_svaba_3594;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3690:HG2_Ill_250bpfermikitraw_3966:HG2_Ill_GATKHCSBGrefine_1918:HG2_Ill_GATKHC_4768:HG2_Ill_Krunchall_4044:HG2_Ill_manta_831:HG4_Ill_150bpfermikitraw_3852:HG4_Ill_GATKHCSBGrefine_2012:HG4_Ill_GATKHC_4836:HG4_Ill_manta_714;NumExactMatchSVs=10;ClusterMaxShiftDist=0.103704;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.148148;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=1;DistForward=11;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=2:241352645-241352710;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3095.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:24:0|1:43:4:0:17:./.:6:0:1:17:0/1:15:21:./.:.:.:.:.:.
chr2	241565037	HG3_PB_SVrefine2Falcon1Dovetail_1804	G	GGGGGTCTCAGAGTGGGGCGAGGCTGTGATGGGGTCTCAGAGCAGGGTGAGGCTATGATGGGGTCTCAGAGTGGGGTGAGGCTGTGACGGGGGTTCTCAGAGCGAGGTGAGGCTGTGACGGGGTCTCAGAGCGGGGTGAGGCTGTGATGGGGGTCTCAGAGCAGGGTGAGGCTGTGATGGGGTCTCAGAGTGGGGTGAGGCTGTGATGGGTGTCTCAGAGTGGGGTGAGGCTGTGATGGGTGTCTCAGAGTGGGGTGAGGCTGTGATGGGGGTCTCAGAGTGGGGTGAGGCTCTGATGGGGTCTCAGAGTGGGGTGAGGCTGTGATGGGTTCTCAGAGCAGGGTGAGGCTGTGATGGGGTCTCAGAGCGGGGTGAGGCTGTGATGGGGTCTCAGAGTGGGGTGAGGCTGTGATGGGGGTCTCAGAGTGGGGTGAGGCTGTGACGGGGGTTCTCAGAGCGAGGTGAGGCTGTGACGGGGTCTCAGAGCGAGGTGAGGCTGTGATGGGGGTCTCAGAGTGGGTGAAGCTCTGATGGGGTCTCAGAGCGGGGTGAGGCTGTGATGGGGTCTCAGAGTGGGGTGAGGCTGTGACGGGGTTCTCAGAGCGAGGTGAGGCTGTGACGGGGTCTCAGAGCGAGGTGAGGCTGTGATGGGGGTCTCAGAGTGGGGTGAAGCTCTGATGGGGTCTCAGAGCGGGTGAGGCTGTGATGGGGTCTCAGAGTGGGGTGAGGCTGTGACGGGGGTTCTCAGAGCGAGGTGAGGCTGTGACGGGGTCTCAGAGCGAGGTGAGGCTGTGATGGGGTCTCAGAGTGGGGTGAGGCTGTGATGGGGTCTCAGAGCGGGGTGAGGCTGTGATGGGGTCTCAGAGTGGGGTGAGGCTGTGATGGGGGTTCTCAGAGGTGAAGCGATGGGGTTCAGAGGGGGCTGTGATGGGTTCTCAGAGCGAGGTGAGGCTTGATGGGGTCTCAGAGTGGGGTGAGGCTGTGATGGGGGTCTCAGAGCGGGGTGAGGCTGTGATGGGGTCTCAGAGCAGGGTGAGGCTCTGATGGGGTCTCAGAGCGGGGTGAGGCTCTGACGGGGTCTCAGAGCGGGGTGAGGCTGTGACGGGGTTCTCAGAGTGGGGCGGCTGTGATGGGGTCTCAGAGTGGGGTGAGGCTGTGATGGGGTCTCAGAGTGGGGTGAGGCTCTGATGGGGTCTCAGAGTGGGGTGAGGCTCTGACGGGGGTCTCAGAGCGAGGTGAGGCTGTGACGGGGTCTCAGAGTGGGGCGAGGCTGTGACGGGGTCTCAGAGTGGGGTGAGGCTGTGAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1441:HG3_PB_pbsv_2866:HG2_PB_SVrefine2PBcRplusDovetail_6257:HG2_PB_pbsv_2889:HG2_PB_SVrefine2Falcon2Bionano_1264:HG2_PB_HySA_5543:HG3_PB_SVrefine2Falcon1Dovetail_1804:HG2_PB_SVrefine2Falcon1plusDovetail_6749:HG2_PB_SVrefine2PB10Xhap12_2132;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1804;NumExactMatchSVs=1;ClusterMaxShiftDist=0.117225;ClusterMaxSizeDiff=0.116427;ClusterMaxEditDist=0.267088;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1305;DistBack=2138;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=893;REFWIDENED=2:241565038-241565930;PctSeqSimilarity=0.9711;PctSizeSimilarity=0.9812;PctRecOverlap=0.6807;SizeDiff=-25;StartDistance=-412;EndDistance=-412;GTMatch=1;TruScore=87;MatchId=3097.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:53:1/1:3:19:0:12:./.:0:3:0:2:1/1:0:9:0/1:8:43:.:4063:.
chr2	241751857	HG2_PB_SVrefine2PB10Xhap12_2137	C	CCCTTCACCTCTGGGTCTGCCTTCACCTCAGGGGCCCGCCTTTACCTCGGGATCTGCCTTCACCTTGGGGATCCACCTTCACCTGGGGATCCACCTTCACCTCAGACATCTGCCTTCACCTCGGGATCCACATTCACCTCAGGGATCTGCCTTCACCTCAGGATCTGCCTTCACCTCGGGATCTGCCTTCACCTCTGGGTCCGCCTTCACCTCAAGATCCACCTTCACCTCAGGGATCAGCCTTCACCTCGAGATCCACCTTCACCTCAGGCAGGGATCAGCCTTCACCTCAGGGATCCGCCTTCACCTCGGGGATCCACCTTCACCTTGGGATCTGCCTTCACCTCTGGGTCCGCCTTCACCTCAAGATCCACCTTCACCTCAGGGATCAGCCTTCACCTCGGGGATCTGCCTTCACCTCGGGGATCAGCCTTCACTCGGGGATCCGCCTTCACCTCGGGGATCCGCCTTCACCTCGGGGATCCGCCTTCACCTCGGGGATCAGCCTTCACCTCGGGGATCCGCCTTCACCTCGGGGATCCGCCTTCACCTCGGGGATCTGCCTTCACCTCGGGGATCCGCCTTCACCTCGGGGATCCGCCTTCACCTCGGGGATCTGCCTTCACCTCAAGGATCCGCCTTCACCTCAAGGATCCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1754:HG3_PB_HySA_4518:HG3_PB_pbsv_2872:HG4_PB_pbsv_2902:HG2_PB_pbsv_2894:HG3_PB_SVrefine2PBcRDovetail_1442:HG4_PB_SVrefine2PBcRDovetail_1528:HG2_PB_SVrefine2Falcon2Bionano_1267:HG2_PB_SVrefine2PBcRplusDovetail_6261:HG2_PB_SVrefine2PB10Xhap12_2137:HG2_PB_SVrefine2Falcon1plusDovetail_6752;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2137:HG2_PB_SVrefine2PBcRplusDovetail_6261;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0987654;ClusterMaxSizeDiff=0.095679;ClusterMaxEditDist=0.260346;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=656;DistBack=7360;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=598;REFWIDENED=2:241751858-241752455;PctSeqSimilarity=0.9696;PctSizeSimilarity=0.988;PctRecOverlap=0.3323;SizeDiff=-8;StartDistance=-440;EndDistance=-440;GTMatch=1;TruScore=76;MatchId=3100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:88:1/1:0:19:1:26:./.:0:4:0:1:./.:0:0:./.:2:24:.:.:.
chr2	241975494	HG2_PB_HySA_5558	G	GGTGGAGGTGCGTCACGGGGTGGGGGCGCGTCACAGGGTGGGGGGTGGGGGGT	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_17157:HG2_PB_HySA_5558:HG4_PB_pbsv_2914:HG3_PB_HySA_4541:HG2_PB_assemblyticsfalcon_15098:HG4_PB_HySA_4428:HG2_PB_pbsv_2908;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_5558;NumExactMatchSVs=1;ClusterMaxShiftDist=0.132075;ClusterMaxSizeDiff=0.130841;ClusterMaxEditDist=0.247788;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=52;DistBack=16;DistForward=11828;DistMin=16;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=7;REFWIDENED=2:241975493-241975502;PctSeqSimilarity=0.9737;PctSizeSimilarity=0.9615;PctRecOverlap=0.5283;SizeDiff=2;StartDistance=24;EndDistance=24;GTMatch=0;TruScore=82;MatchId=3101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:50:1/1:3:24:2:23:./.:6:13:5:4:./.:0:0:./.:.:.:.:.:.
chr2	242118038	HG2_PB_SVrefine2Falcon2Bionano_1276	A	AATTTTTTTTTTTTTTTTTAGACGGAGTCTGGCTCTGTCCCCCAGGCTGGAGTGCAGTGGCGCAATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCATCCGCCACCATGCCCAGCTAGTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCTCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTCCTTCCAATCTTTTCTCTGGTGTCTACATGCACTGAGTTTAAGAATAGCTAGATCTCGGCCGGGTGCGGTCAGGAGATCGAGACCATCCTGGCTAACACCATCGCTACTAAAACTACAAAAATATTAGCCGGGCGTGGTGGCAGGCGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACTCGGGAGGCAGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTTCAGCCTGGGCGACAGTGCGAGACTCCATCTCAAAAAAATAAAAAAAGAAAAGACATTGGGAGGAAATATGCCAAATGAGAAGCCCTTGTGGGTAGTTGGTTTCTTTTTTCCTTTATACTCTATAGTTCTCCTGAATTTTCTGTAATGAGCATGTATTTCTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1276:HG2_PB_HySA_5560:HG2_PB_pbsv_2915:HG3_PB_pbsv_2889:HG4_PB_pbsv_2921:HG4_PB_HySA_4433:HG3_Ill_MetaSV_2960:HG4_Ill_MetaSV_2907:HG2_Ill_MetaSV_2816:HG2_Ill_GATKHCSBGrefine_1936:HG3_Ill_GATKHCSBGrefine_1955:HG2_PB_PB10Xdip_17160:HG3_PB_SVrefine2PBcRDovetail_1451:HG2_Ill_SVrefine2DISCOVARplusDovetail_7382:HG2_PB_SVrefine2PB10Xhap12_2151:HG4_PB_SVrefine2PBcRDovetail_1535:HG3_PB_SVrefine2Falcon1Dovetail_1815:HG4_Ill_SVrefine2DISCOVARDovetail_2169:HG3_Ill_SVrefine2DISCOVARDovetail_2153:HG2_PB_SVrefine2PBcRplusDovetail_6272:HG2_PB_SVrefine2Falcon1plusDovetail_6763:HG4_PB_SVrefine2Falcon1Dovetail_1762;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1276;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115841;ClusterMaxSizeDiff=0.110258;ClusterMaxEditDist=0.20284;PBcalls=14;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=703;DistBack=12535;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=132;REFWIDENED=2:242118039-242118170;PctSeqSimilarity=0.991;PctSizeSimilarity=0.9943;PctRecOverlap=0.8996;SizeDiff=-4;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=96;MatchId=3103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:80:1/1:0:31:0:31:./.:1:3:1:2:./.:0:0:./.:6:105:.:.:.
chr2	242535944	HG2_PB_SVrefine2PB10Xhap12_2159	G	GGGCGCGGTGGCTCATGCCTGTAATCCCAACACTTTGGGGAGGCTGAGGTGGGCAGATCACTTGAGGTCAGGAGTTGGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGACATGGTGTCGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAAGCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCATGCCATTGTATGCCAGCCTGGGCGACAGACCGAGACTCCGTCTCAAAAAAAGGCAGCTTGGAAGGAATACAGGTATGGTGGAGGAAGAAGAAAACCAAAGTCTACCATTAATGTCCTTGGGGAGGTAGAGAAATTGTTGTGTCCATGAATGAAATGAGAACAGGACGCCAAGAACGAGGTGCATGGAAGACAAAGGGGGATCAGGGAGTATGAGTTCAACAGCAAAACAAAATCTTCCATACAACTACTTGACATCAACAACGAGGAAACCTCCCAGAAAACAGAGCAAGAGATGGGAAGAAAAAGTAAGGGAGATTAGAAAACACAAGGCCACTTCAGGAGTTCCAAGAGAAGGGGGGTAGTGGGGAGGGAGTCTCAGGATGGCAGCTCTACTCCTTGGTCTTAACAGAGCAGATCAAGCAGCTCTGAGAGTTCCGCAGGTGGAATTCAGGTATCACATCTGAGTACCCAAGCTGAGTTTTAGATACCGGCAGAACGCATGGTGCTGACTCAGGGATAAGCATGTAAACATTAAGCAAACCAAAAAAAAATAACATTTTTAACTCAAAAAAGGTACACGGAAAAGGAACAGCCATCGTGGAGCCCGTGATCTGGCTGTGAGCGTGGGGACTCGGCTGTAACAGTGGCAACCCAGTAAAATCAGGACACACACTCTCCGGGAAGGCGGGAGTAGGACATGCATGGGAACCGAGTTGGGGTCTTGGGTACGGGAGCAGAATCTTCTTCATCCACGGTGAGCAGACGCTCGGTCAGTAAGGCGTAGTCAGCAATGTTAAGAGGAAGCAATCAACACACCTCATGGCTAAATATGGAGCTAAAAACTAAATGAATCAGTTCAAAGAGTTGAGACCGTTTACCTCTAACGAACAAGAAATAAGGGTCAGTTGAGTGGGAACACTACGTAGCAGAACTCACAAACTGACAGATGAAGAAGAAAAAAGGGCCAAAGAGAATTTCAATCACGATTAGGAAGTCTCATTTAAAGACAAATAGCCACGGGTTGCTTAAGGACAGATACATTCTGAGAAATGTGCCATTCAGTGATGTCATCATTGTGCAAACATCACAGCGTGCACCTACACAAACCTAGATGGAATGGCCTCCTCCACACTTCGGCTCTCTGGGACAGCCCATGACTCCTTAGCTAGAAAAACCTGCACAGCATATAGTTACGTGTATATGTATACGTACGGTAGACAGACTGTCCTATATACTATAGGCAACTGTAATACAATGCAAAGTCTTTGTGCATCTAAACATAGGAAAGCTGCAGTAAAAATTCAGTATAAAAGATTTTTAGGCCAGGCGTGATGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGCTGAGGTGGGCGGATCATGAAGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAACCCCGTCTCCACTAAAAATACAAAAATTAGCCTGGCGTGGTGGCGCGGGCCTATAATCCCAGCTACTCAGGAGTCTGAGGCAGGAGAATTGCTTGAACCCCAGAGGCGGAGGTTGCAGTGAGCTGAGATTGTGCCACTGCACTCCAGCCTGGGTGACACAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAAATCTAAATTGTTGCCTTCAAAACATTTGCGGAAAAAACAAAAAAGATAAAAAGGTCCACCTGTCGCCCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17167:HG3_PB_pbsv_2901:HG2_PB_HySA_5574:HG2_PB_pbsv_2927:HG3_PB_SVrefine2Falcon1Dovetail_1824:HG2_PB_SVrefine2Falcon2Bionano_1283:HG4_PB_SVrefine2Falcon1Dovetail_1769:HG3_PB_SVrefine2PBcRDovetail_1455:HG4_PB_SVrefine2PBcRDovetail_1544:HG4_Ill_SVrefine2DISCOVARDovetail_2176:HG3_Ill_SVrefine2DISCOVARDovetail_2158:HG2_PB_SVrefine2PBcRplusDovetail_6280:HG2_PB_SVrefine2PB10Xhap12_2159:HG2_PB_SVrefine2Falcon1plusDovetail_6772:HG2_Ill_SVrefine2DISCOVARplusDovetail_7391:HG2_10X_SVrefine210Xhap12_2231;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2159:HG2_PB_SVrefine2PBcRplusDovetail_6280;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0701052;ClusterMaxSizeDiff=0.0701052;ClusterMaxEditDist=0.215729;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=1938;DistBack=2;DistForward=46;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=281;REFWIDENED=2:242535945-242536225;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9995;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3105.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:./.:0:0:0:0:./.:0:4:0:2:1/1:0:22:./.:14:252:.:4302:.
chr2	242634165	HG2_PB_SVrefine2PBcRplusDovetail_6282	T	TGGCTCACACTGTAATTCTAGCACTTTGGGAGGCCGAGGCGAGTGGATGATGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATAGTGAAAACCGGTCTCTACTAAAAATACAAAAAAAATTGGTAGGGCTTGGTGGCGGGCGCCTGTAGTCCCACCTACTCAGGAGGGTGAGGCAGGAGAATCACTTGAATCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCACCACTGCACTCCAGCCTGGGCAACACAGTGAGACAATGTCTCAAAAAAAAAAAAAAAAAAAAAAGTGCAGTACTCTCTGAGCCTGCAGTACCATTTCTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTAATGAGACAGAGCCTCGCTCCGTCGCCCAGGCTGATCAATGGCGTGATCTCGGCTCACTGTAACCTCCGCCTCCTGGGTTCAGCGATTCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACGTACCACCATGCCCGGCTAATTTATTGTATTTTTAGTAGAGACGGGGTTTTACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCGCCCTCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCGGCCCTACCAGTTCTTTAGAATAAATTATTAGAAATGGTACTGCAGGCCGGGCGAGAC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_2161:HG3_PB_HySA_4554:HG3_PB_pbsv_2904:HG4_PB_HySA_4457:HG2_PB_pbsv_2930:HG4_PB_pbsv_2940:HG4_Ill_MetaSV_2910:HG3_Ill_MetaSV_2962:HG3_PB_SVrefine2PBcRDovetail_1457:HG2_PB_SVrefine2Falcon1plusDovetail_6774:HG2_PB_SVrefine2Falcon2Bionano_1285:HG3_PB_SVrefine2Falcon1Dovetail_1827:HG4_PB_SVrefine2Falcon1Dovetail_1770:HG4_PB_SVrefine2PBcRDovetail_1547:HG2_PB_SVrefine2PBcRplusDovetail_6282;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6282:HG4_PB_SVrefine2PBcRDovetail_1547;NumExactMatchSVs=2;ClusterMaxShiftDist=0.042796;ClusterMaxSizeDiff=0.0399429;ClusterMaxEditDist=0.228772;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=692;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=277;REFWIDENED=2:242634166-242634442;PctSeqSimilarity=0.9826;PctSizeSimilarity=1;PctRecOverlap=0.7951;SizeDiff=0;StartDistance=-142;EndDistance=-142;GTMatch=0;TruScore=92;MatchId=3106.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:1/1:0:16:0:19:./.:0:4:0:2:1/1:0:13:1/1:5:94:.:.:.
chr2	242970727	HG2_PB_SVrefine2Falcon1plusDovetail_6787	C	CGGAGAAAGGTATGACAGGAGGAGCAGACCAAGAAGACGGGAACAGCACGGGGCCTGGGAGCTGCAAATGCCCACGATACGTGAGAGAT	10	PASS	ClusterIDs=HG2_PB_pbsv_2958:HG2_PB_SVrefine2Falcon1plusDovetail_6787:HG2_PB_assemblyticsfalcon_15139:HG4_PB_SVrefine2Falcon1Dovetail_1787:HG3_PB_pbsv_2925;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6787;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0994475;ClusterMaxSizeDiff=0.0994475;ClusterMaxEditDist=0.244444;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=88;DistBack=4237;DistForward=101;DistMin=101;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=360;REFWIDENED=2:242970471-242970830;PctSeqSimilarity=0.9889;PctSizeSimilarity=0.9778;PctRecOverlap=0.978;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:55:0|1:27:4:3:49:./.:11:1:13:1:0/0:22:0:./.:.:.:.:.:.
chr3	1032228	HG2_PB_SVrefine2Falcon2Bionano_1306	A	AAATGGGTGCATGCATGGATGGATGAATGGATGCACGAATGAATGGATGGATGGATGGATGGATGGATGGATGGATGAATGGATGGATGCACAAATGGATGAACGAATGCATGGATGGATGAATGGATGAATGAATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGGTTCATGGATGCATGAATGAATGGATAGATGCATGAATGAATAGATGGATGCATGGATGGATGGATGCACAAATGGATGAATGAATGCATGGATGGGTGGATGGGTGGATGAATGGATGGATGGATGGTTGGATGGATG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1306:HG2_PB_HySA_5615:HG4_PB_pbsv_2986:HG3_PB_pbsv_2938:HG2_PB_pbsv_2971:HG3_PB_HySA_4577:HG2_PB_PB10Xdip_20881:HG2_PB_PB10Xdip_20882:HG4_PB_HySA_4486:HG2_PB_SVrefine2PB10Xhap12_2192:HG3_PB_SVrefine2Falcon1Dovetail_1852:HG4_PB_SVrefine2PBcRDovetail_1566:HG4_PB_SVrefine2Falcon1Dovetail_1793:HG2_PB_SVrefine2Falcon1plusDovetail_7778:HG3_PB_SVrefine2PBcRDovetail_1475:HG2_PB_SVrefine2PBcRplusDovetail_7210;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1306:HG2_PB_SVrefine2PBcRplusDovetail_7210;NumExactMatchSVs=2;ClusterMaxShiftDist=0.141104;ClusterMaxSizeDiff=0.134969;ClusterMaxEditDist=0.271186;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=320;DistBack=6708;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=512;REFWIDENED=3:1032229-1032740;PctSeqSimilarity=0.9466;PctSizeSimilarity=0.9875;PctRecOverlap=0.5296;SizeDiff=4;StartDistance=-149;EndDistance=-149;GTMatch=1;TruScore=82;MatchId=3535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:121:1/1:0:39:1:32:./.:0:0:0:0:0/1:23:11:0/1:4:14:.:.:.
chr3	1069601	HG2_10X_SVrefine210Xhap12_2249	T	TTCTTTCTTCTTTCTTTAACAATATAGCAGAGAAAGTCTCCAATCTGAGTAAAAAAGAAACGATCCAGCTCTGGAGCCTACGTAACACTAAAATAATGTGTCACAACAGCACCACAACAGCAAAAGTAATTAATCACTTACTTTAAGAACCCTAGGAAACCTAAGACAGTAATTTCAAATGGAGTTCACTGCAAAAGCAGCCAAAATGCTGCCATAAAACGTTTTAATATTCAAATTAAACTTGAAATATTTTTTACCAGACTGAAACAAATGTAATTAAACACCACACAAGCACACACACAACACACACACACACACACTTGAAGACAGAATTTCTGATAAGATTCAAATGCTGATTTATATAGCACCAAATAACTTTAGAGTGTCCAGGTGTTAATTTTAACTACAAAGAATATTATAGAAGTAACACATTGCTTCCCAAGAGTATATAAACAAAAATTTTTCTGTTCTTTATTTTTTAATATAGCACCATAGATTCATTGTCAGTTTGCAACAGCATCTTAAAGGTTCATTTAGTCAAAAGTATGACCAAAGGTCCTAAAAAAGCTGTTTAAAATATTATCAAAGATGGGGGGAATGGAGTTGTTTATTATATGTGGCTATTTGTAATCCAACATGAATTAAGATACCAGTAAAATCCTGCCTGGAAAATGTTGTATTTTCTATCAAAACTCTAATTTGTAGTTTACCACATCATATTACTTTTAGCTGTATTGAAAAGTAGTCTTTAAATCAATAGACTAGAAAATTATCGCCTGCAAACTTGCAACAATGGAAATAATGAAAAATACAGTCAGGGATCATCTAAATGTTGTAAGCTATGGGAAAAAAGTTCAACAAAAATGAATAGAATTTAGTGTCTTTTTGAGAAACCCCTACATAAAAGCAAGATTTGTTAACAAAACTGATATTTTAGGTCTTAGCTTACAAAATAAATATTAGGAGAATAGAAGCATTCAATCAACTTCGTTTCAAGTCTCATTTTCCGTTGCCTAAATAAATAGCCTCTTTAGGGGTAC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_2171:HG2_PB_assemblyticsfalcon_17102:HG2_PB_assemblyticsPBcR_16536:HG2_PB_SVrefine2Falcon1plusDovetail_7779:HG2_PB_HySA_5617:HG2_PB_SVrefine2PB10Xhap12_2193:HG3_PB_SVrefine2Falcon1Dovetail_1853:HG2_PB_SVrefine2PBcRplusDovetail_7211:HG2_PB_SVrefine2Falcon2Bionano_1307:HG2_10X_SVrefine210Xhap12_2249:HG2_Ill_SVrefine2DISCOVARplusDovetail_8257:HG4_PB_SVrefine2Falcon1Dovetail_1794:HG4_Ill_MetaSV_3260:HG4_PB_SVrefine2PBcRDovetail_1567:HG4_PB_HySA_4489:HG4_Ill_SVrefine2DISCOVARDovetail_2188:HG2_PB_PB10Xdip_20884:HG2_PB_PB10Xdip_20883:HG3_PB_SVrefine2PBcRDovetail_1476;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2249:HG2_PB_SVrefine2Falcon2Bionano_1307:HG2_PB_SVrefine2PBcRplusDovetail_7211;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0842773;ClusterMaxSizeDiff=0.0842773;ClusterMaxEditDist=0.0888083;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1039;DistBack=37;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:1069602-1069603;PctSeqSimilarity=0.9914;PctSizeSimilarity=0.9867;PctRecOverlap=0.9867;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3536.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:104:1/1:0:17:0:38:./.:0:0:0:0:1/1:1:40:0/1:25:120:.:978:.
chr3	2029084	HG2_PB_SVrefine2Falcon2Bionano_1315	C	CGGCCGGGCGCGGTGGCTCACGCCTGTCATCCCAGCACTTCGGGAGGCCGAGGCGGGCGGATCACGAGCTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCGGGAACCCGGGGGGCGGAGCTTGCCGTGAGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAATAAATAAATACATAAATAAGAAATAGACATGCATTAAAATAATAGGTAGGCTATATAATACACAGAAAACATTTATACAAAATTAATGTCCA	20	PASS	ClusterIDs=HG3_PB_HySA_4596:HG4_PB_HySA_4506:HG4_PB_pbsv_2998:HG2_PB_PB10Xdip_20157:HG2_PB_pbsv_2984:HG2_PB_PB10Xdip_20156:HG3_PB_pbsv_2949:HG2_PB_HySA_5630:HG2_PB_SVrefine2Falcon1plusDovetail_7786:HG2_10X_SVrefine210Xhap12_2257:HG2_PB_SVrefine2PBcRplusDovetail_7219:HG2_PB_SVrefine2PB10Xhap12_2202:HG2_PB_SVrefine2Falcon2Bionano_1315:HG2_Ill_SVrefine2DISCOVARplusDovetail_8264:HG4_PB_SVrefine2PBcRDovetail_1574;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8264:HG2_PB_SVrefine2Falcon2Bionano_1315:HG2_PB_SVrefine2PB10Xhap12_2202:HG2_PB_SVrefine2PBcRplusDovetail_7219;NumExactMatchSVs=4;ClusterMaxShiftDist=0.131274;ClusterMaxSizeDiff=0.131274;ClusterMaxEditDist=0.249691;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=378;DistBack=74668;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=304;REFWIDENED=3:2029085-2029388;PctSeqSimilarity=0.9891;PctSizeSimilarity=0.9974;PctRecOverlap=0.7889;SizeDiff=1;StartDistance=-79;EndDistance=-79;GTMatch=0;TruScore=92;MatchId=3538.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:69:1/1:3:32:2:27:./.:0:0:0:0:1/1:0:44:1/1:1:57:.:.:.
chr3	2125778	HG2_PB_SVrefine2PBcRplusDovetail_7220	G	GTCTGGTGGGGATGTGGAGAACCTTTATGTCTAGCTCAGGGATTGTAAATACACCAATCGGCACTCTGCATCTAGCTCAAGGAAGGTTTGTAAACCACCAATCAGCACCCTGTGTCTGCTCAGGGTTTGTGAATGCACCAATGGACACTGTATCTAGCTAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7787:HG3_PB_pbsv_2950:HG4_PB_pbsv_2999:HG3_Ill_SVrefine2DISCOVARDovetail_2180:HG2_PB_SVrefine2Falcon2Bionano_1316:HG2_Ill_SVrefine2DISCOVARplusDovetail_8265:HG2_PB_HySA_5632:HG2_PB_PB10Xdip_20159:HG2_PB_PB10Xdip_20158:HG2_PB_HySA_5631:HG2_PB_pbsv_2985:HG4_PB_SVrefine2PBcRDovetail_1575:HG4_PB_SVrefine2Falcon1Dovetail_1802:HG4_Ill_SVrefine2DISCOVARDovetail_2197:HG3_PB_SVrefine2Falcon1Dovetail_1858:HG2_PB_SVrefine2PBcRplusDovetail_7220:HG2_PB_SVrefine2PB10Xhap12_2203;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7787:HG4_PB_SVrefine2PBcRDovetail_1575:HG4_PB_SVrefine2Falcon1Dovetail_1802:HG4_Ill_SVrefine2DISCOVARDovetail_2197:HG3_PB_SVrefine2Falcon1Dovetail_1858:HG2_PB_SVrefine2PBcRplusDovetail_7220:HG2_PB_SVrefine2PB10Xhap12_2203;NumExactMatchSVs=7;ClusterMaxShiftDist=0.10241;ClusterMaxSizeDiff=0.0780781;ClusterMaxEditDist=0.259587;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=160;DistBack=57875;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=517;REFWIDENED=3:2125779-2126295;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9193;SizeDiff=0;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=97;MatchId=3539.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:1/1:1:26:0:16:./.:0:0:0:0:1/1:0:35:./.:.:.:.:.:.
chr3	2747116	HG2_PB_SVrefine2Falcon2Bionano_1319	T	TATATATATTTATATCTATATATATAAATATATAGATATAAATATATAAATATGTATATAATATATAAATATATATAATATATAAATATATATATAATTTTATATAAATATATATAAATATATATAATTTTATATAAATATATAAATATATAAAATTTTATATATTTATATATAAACATATATAACTTTATATATAAATATATATAATTTTATATATAAATATATATAATTTTATATATTTATATATAAATATAATTTTATGTATAAATATATATAATTATATATATATTTATATATAATTTTATATATAAATATATATAATTATATATATTTATGTATAAATATAATTTTATATATAAATATATATAATTTTATATATATAATTTTATATATAAATATATATAATTATATATTTATATATAAATATATATAATTTTATATATAATATATATAATTTTATATATTATATATAAATATATATATAATTTATATATAAATATATAAAATTATATATAAATATATATAATTTATATATAAATATATATAATTTATATATATAAATAGATATAATTTTATATATTTATTTATATAAATTTTATATATTTATATAAATAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1861:HG2_PB_HySA_5642:HG3_Ill_GATKHCSBGrefine_1984:HG4_Ill_GATKHCSBGrefine_2054:HG3_Ill_GATKHCSBGrefine_1983:HG3_PB_HySA_4607:HG4_PB_pbsv_3002:HG2_PB_PB10Xdip_20631:HG2_PB_PB10Xdip_20630:HG4_PB_HySA_4515:HG2_PB_pbsv_2988:HG3_PB_pbsv_2953:HG4_PB_SVrefine2PBcRDovetail_1577:HG4_PB_SVrefine2Falcon1Dovetail_1805:HG3_PB_SVrefine2PBcRDovetail_1485:HG2_PB_SVrefine2PBcRplusDovetail_7222:HG2_PB_SVrefine2PB10Xhap12_2206:HG2_PB_SVrefine2Falcon2Bionano_1319:HG2_PB_SVrefine2Falcon1plusDovetail_7789;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1319:HG2_PB_SVrefine2PB10Xhap12_2206:HG2_PB_SVrefine2PBcRplusDovetail_7222:HG3_PB_SVrefine2PBcRDovetail_1485;NumExactMatchSVs=4;ClusterMaxShiftDist=0.116317;ClusterMaxSizeDiff=0.116317;ClusterMaxEditDist=0.192099;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=614;DistBack=18183;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=602;REFWIDENED=3:2747117-2747718;PctSeqSimilarity=0.9872;PctSizeSimilarity=0.984;PctRecOverlap=0.8592;SizeDiff=-10;StartDistance=-83;EndDistance=-83;GTMatch=0;TruScore=94;MatchId=3540.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:85:1/1:2:30:1:36:./.:0:0:0:0:./.:0:5:./.:4:53:.:.:.
chr3	2787778	HG2_Ill_Krunchall_4113	C	CACACACCCACACACACATTTTAAATAGAATGTGTATAAGCGAGCAATTGAACAAATTTT	20	PASS	ClusterIDs=HG2_PB_HySA_5645:HG4_PB_HySA_4516:HG3_PB_HySA_4610:HG3_PB_pbsv_2954:HG2_PB_PB10Xdip_20633:HG4_PB_pbsv_3003:HG2_PB_PB10Xdip_20632:HG4_Ill_scalpel_2803:HG2_PB_pbsv_2989:HG4_Ill_manta_726:HG4_Ill_Krunchall_4297:HG4_Ill_GATKHC_4940:HG4_Ill_GATKHCSBGrefine_2055:HG4_Ill_250bpfermikitraw_4080:HG4_Ill_150bpfermikitraw_3926:HG3_Ill_scalpel_2985:HG3_Ill_manta_662:HG3_Ill_Spiral_3180:HG3_Ill_Krunchall_4091:HG3_Ill_GATKHC_4977:HG3_Ill_GATKHCSBGrefine_1985:HG3_Ill_250bpfermikitraw_3962:HG3_Ill_150bpfermikitraw_3836:HG2_PB_assemblyticsfalcon_17129:HG2_PB_assemblyticsPBcR_16566:HG2_Ill_scalpel_2879:HG2_Ill_manta_843:HG2_Ill_Krunchall_4113:HG2_Ill_GATKHC_4869:HG2_Ill_GATKHCSBGrefine_1975:HG2_Ill_250bpfermikitraw_4045:HG2_Ill_150bpfermikitraw_3751;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3751:HG2_Ill_250bpfermikitraw_4045:HG2_Ill_GATKHCSBGrefine_1975:HG2_Ill_GATKHC_4869:HG2_Ill_Krunchall_4113:HG2_Ill_manta_843:HG2_Ill_scalpel_2879:HG2_PB_assemblyticsPBcR_16566:HG2_PB_assemblyticsfalcon_17129:HG3_Ill_150bpfermikitraw_3836:HG3_Ill_250bpfermikitraw_3962:HG3_Ill_GATKHCSBGrefine_1985:HG3_Ill_GATKHC_4977:HG3_Ill_Krunchall_4091:HG3_Ill_Spiral_3180:HG3_Ill_manta_662:HG3_Ill_scalpel_2985:HG4_Ill_150bpfermikitraw_3926:HG4_Ill_250bpfermikitraw_4080:HG4_Ill_GATKHCSBGrefine_2055:HG4_Ill_GATKHC_4940:HG4_Ill_Krunchall_4297:HG4_Ill_manta_726:HG4_Ill_scalpel_2803;NumExactMatchSVs=24;ClusterMaxShiftDist=0.114754;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.349206;PBcalls=10;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=59;DistBack=3513;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=137;REFWIDENED=3:2787692-2787828;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:0:12:1:13:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr3	2961994	HG2_Ill_GATKHCSBGrefine_1976	G	GAGGCTGGATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAATCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACCGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_2990:HG3_PB_SVrefine2Falcon1Dovetail_1862:HG3_PB_pbsv_2955:HG2_PB_HySA_5648:HG3_Ill_GATKHCSBGrefine_1986:HG2_Ill_GATKHCSBGrefine_1976:HG3_Ill_MetaSV_3303;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1976:HG3_Ill_GATKHCSBGrefine_1986;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0434783;ClusterMaxEditDist=0.267081;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:2961995-2961994;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:34:0|1:30:2:1:29:./.:0:0:0:0:0/1:28:14:0/1:8:37:.:.:.
chr3	3232242	HG3_Ill_SVrefine2DISCOVARDovetail_2184	A	AGTGGCTCACATCTGCAATCCCAGCACTTCCAGCAATTCGGGAGACCAAGGCAGGAAAATCGCTTGAGTTTGGGGGTTTGGGACCAGCTTAGGCAACACAGTGAGACTTTGTCTCTATTAAAAATAAATTAGCCAGATATGGTGGCATGCACCCGTAGTACCAGCTACTTGGGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAGGTTGAGGTTGCAGTGAGCCATGATTGCACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAGAAAAAAAAAAGGATGCAGGAGGGTCAGAGACAGAGATGTGACAGCAGAAGCAGAGGTCCAGTGATGTGGGACCACCATGAGCCAAGGAATGCACCAGCCTCCAGAAGCAGAGAAAGGCAAGGCAAGGATTCTCTCAAGAGCCTCCAGAAGGGCTGCAGCCTTGCCAACACCTTGATTTTTGCTGACTGAGACTAAATTTAGACTTCTGATCTCCAGAACTATAAAGACAAATTTGTTTTGTATTAAGCCACCAAGCTTGTGGTTGTTATAGTGGCACAAGAAAACGAATGCAGGGAAGAATGTGACTATACAGAGATCTCGAAGGGCAGAAAATGTTTTTGCAGCCAGAGTTTGTTTTGGGGTGAGGATGGAATAGGGTGAGCACCAGGGCATTGTTCTTCAAAGTGGGCCCAGGACATCTGAATGCCTGTTCACATGCAGATAGACCCCTGGGCCCTACCTTAGAACTTTCCAATCAGACTGCTCCTACAGTGACCCTCATGACTGTGTGTGCACTGCTGTGACGACAGTGATGAAGTTATAGCCTCTCCAGATAGACAAATAAATCAAAAGCTGACATCAGAATATTGATTTGCACTGGCCCTTTTTGATAGAAAAATTTAGACCAGACCTTGAACAGATGGGCTGCTCACTTCTCCCTACCAGCTGTGATCATGGAGATGTAACGTAAGTTAATTTACCCTTCATCGCATCTTTTTCAAACGGTTGCCATATTGAAGTACAGCGTTAGGTATGGAGGACAGACAATGGTGAACAAAACAGATGTGCCCCACCCTCTCCCAGAACCTACAGTTCTAATGGGGAAAGCAGACATTGATTACATAAACGTGCCAGTATATAACATAAATGATCAATGTTCTAAAGAGGAAGTCCATGGTGCTATGAGCCTCTAATTGGAGGACCTGACCTGTCTGGGGAAGAAAGGCACAGGACCTTCCCTTGGGAAGTAATGTCTGAAACATCAGTAAGAGGTAACTAGGGAAGAGGGTGTGGATCCGGGAGGGAGAGCATAGCAGGAACGGCATATGCAAGAACCCTAAGGCTGGAGACACTCGTTGAGGCCAGAGCTCAGGGAGAAAAGGTGAAAGTGGCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2265:HG3_PB_pbsv_2958:HG4_PB_pbsv_3006:HG2_PB_HySA_5650:HG2_PB_PB10Xdip_20652:HG2_PB_PB10Xdip_20651:HG3_Ill_MetaSV_3304:HG3_PB_HySA_4615:HG4_PB_HySA_4522:HG2_PB_SVrefine2Falcon1plusDovetail_7791:HG3_PB_SVrefine2PBcRDovetail_1486:HG4_PB_SVrefine2PBcRDovetail_1579:HG4_PB_SVrefine2Falcon1Dovetail_1806:HG4_Ill_SVrefine2DISCOVARDovetail_2201:HG3_PB_SVrefine2Falcon1Dovetail_1863:HG3_Ill_SVrefine2DISCOVARDovetail_2184:HG2_PB_SVrefine2PBcRplusDovetail_7226:HG2_PB_SVrefine2PB10Xhap12_2207:HG2_PB_SVrefine2Falcon2Bionano_1322:HG2_Ill_SVrefine2DISCOVARplusDovetail_8268;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2265:HG4_PB_SVrefine2Falcon1Dovetail_1806:HG4_Ill_SVrefine2DISCOVARDovetail_2201:HG3_PB_SVrefine2Falcon1Dovetail_1863:HG3_Ill_SVrefine2DISCOVARDovetail_2184:HG2_PB_SVrefine2PBcRplusDovetail_7226:HG2_PB_SVrefine2PB10Xhap12_2207:HG2_PB_SVrefine2Falcon2Bionano_1322:HG2_Ill_SVrefine2DISCOVARplusDovetail_8268;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0460014;ClusterMaxSizeDiff=0.0452937;ClusterMaxEditDist=0.161898;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1392;DistBack=32941;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=220;REFWIDENED=3:3232243-3232462;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9928;PctRecOverlap=0.8988;SizeDiff=10;StartDistance=-136;EndDistance=-136;GTMatch=0;TruScore=96;MatchId=3543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:118:./.:0:4:0:3:./.:0:0:0:0:1/1:0:31:0/1:20:165:.:1462:.
chr3	4315416	HG2_PB_PB10Xdip_20714	A	AGGGAGGATACGGGGGGGAGGATACGGGAGGGAGGATACGGGAGGGAGGATACGGGAG	10	PASS	ClusterIDs=HG3_PB_pbsv_2966:HG2_PB_HySA_5675:HG2_PB_PB10Xdip_20715:HG2_PB_PB10Xdip_20714;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_20714:HG2_PB_PB10Xdip_20715;NumExactMatchSVs=2;ClusterMaxShiftDist=0.217054;ClusterMaxSizeDiff=0.20155;ClusterMaxEditDist=0.27907;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=57;DistBack=36;DistForward=29;DistMin=29;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=13;REFWIDENED=3:4315415-4315430;PctSeqSimilarity=0.9057;PctSizeSimilarity=0.7917;PctRecOverlap=0.6986;SizeDiff=-15;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=79;MatchId=3544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:36:./.:2:27:14:9:./.:0:0:0:0:./.:4:2:./.:.:.:.:.:.
chr3	5121239	HG2_Ill_SVrefine2DISCOVARplusDovetail_8280	A	ATATATATATATATATATGTATATGTATATACACACACACACATATATATATACACACACACACATATATATACACACACATATATGTACGTGTATATATATGTGTGTGTATGTGTATATATATGTGTGTGTGTGTGTGTG	20	PASS	ClusterIDs=HG2_PB_pbsv_3009:HG3_Ill_Spiral_3201:HG3_PB_assemblyticsfalcon_17095:HG2_Ill_GATKHCSBGrefine_1989:HG4_Ill_GATKHCSBGrefine_2069:HG4_Ill_SVrefine2DISCOVARDovetail_2210:HG2_PB_SVrefine2Falcon2Bionano_1331:HG2_Ill_SVrefine2DISCOVARplusDovetail_8280:HG2_10X_SVrefine210Xhap12_2278:HG2_PB_HySA_5686:HG3_Ill_Spiral_3202:HG3_Ill_GATKHCSBGrefine_1997:HG2_PB_SVrefine2PBcRplusDovetail_7237:HG4_Ill_MetaSV_3269:HG3_Ill_MetaSV_3308:HG3_PB_SVrefine2Falcon1Dovetail_1869:HG2_PB_PB10Xdip_20784:HG2_PB_PB10Xdip_20783:HG4_PB_SVrefine2PBcRDovetail_1588:HG4_PB_SVrefine2Falcon1Dovetail_1813:HG2_PB_SVrefine2PB10Xhap12_2217:HG2_PB_SVrefine2Falcon1plusDovetail_7799:HG4_PB_HySA_4554:HG3_PB_HySA_4639:HG3_PB_SVrefine2PBcRDovetail_1493:HG4_Ill_GATKHCSBGrefine_2068:HG2_10X_SVrefine210Xhap12_2277:HG3_Ill_SVrefine2DISCOVARDovetail_2191:HG2_PB_HySA_5685:HG3_PB_pbsv_2972;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2278:HG2_Ill_SVrefine2DISCOVARplusDovetail_8280:HG2_PB_SVrefine2Falcon2Bionano_1331:HG4_Ill_SVrefine2DISCOVARDovetail_2210;NumExactMatchSVs=4;ClusterMaxShiftDist=0.327759;ClusterMaxSizeDiff=0.327759;ClusterMaxEditDist=0.366782;PBcalls=17;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=140;DistBack=21;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=3:5121240-5121256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3545.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:1:28:0:22:./.:0:0:0:0:1/1:1:22:./.:.:.:.:.:.
chr3	5273935	HG2_PB_HySA_5688	C	CCAAATTTTAAATACAACAGATATACTATATACTTGCTTATGTACGTATATGTATATCCGCGTTTAATACAGAAAAATAATTGTTTCTTTTTTTTTTTGTCTCCAAGAACCATTTTTGTCCTTTGGTGATATCACCCCATTAAGGATACATGATTTAGTGCTTACTCTGCATGCAACAGTCAGTCCTCTGAGTGCTTACTTATAACAACTCATTTAATACTCACATGACCCATCAGATTTCCCATTTCAACGTTGGGGCATTGACGTACAGAGAAATGACTTGTCAAAGTCACAGACAGAGCTAGTAAATAGTTGCCTGGAGTTAACAAAACGCAAAGATCGAGGAAAGTTTCTACAAAAGACTACTTCTGACACAAAATACAAGGAATTTCAGCCAACTACAAGTCAGAGGGAGAAATCTCCCAAATTCACCCTCGGTTTGATAACTTGCTAGAGGCATCATGGAACTCATTGAAAGCTAGTGTGCCTCATGATTACAAGCTAATACCCAGAAACAGATAAAGATTAATTAGGCAAAGCAGGAGAAGCATGGAACAGAGTCTGGAAGAGTTGCAAACGCAAAAATTATATTGTTTTCTTCTATTTTGCCCTCCTGGCATTGATGTGTGATTGCAACAAAGAGATCCTCACCTAAGCTTTGGTGACTAGAGTTTTTTATCAGGGCACAATTATGTAAGCATATTGATTGATTGATTGATTGCCTACATTAAACAGTCCCAACCTTTTTGGCACAGGAATCAGTTTCATGGAAGACAATTTTTTCACAGATGGGTTGGGGGGAATGGTTTCAGGAATGAAACTGTTGACCTCAGATATCATCAGCATTAGGTTTTCATAAGCAGCATGCAACCTAGATCCCTCGCATGCACAGTTCACAATAGGGTTTGATCTCCTGTGGGAATCTAATGCACTGCTGATCTGACAGCAGGTGGAGCTCAGGTGGTAATGCTCACTCACCAAGGCTCACCTCTGCTGTGTGGCCAGTCCTAACAGGCACAAACTGGTACTGGTCTGTGGTCAGGGGTTGGGGGACTCCTGGCCTGCGTTGGTTGAACTCAGACTTCAGGTCAATTGATACAGCTTGGCCAAACGCCCCACCCTAATCACAGGGTTGGTCCTTCTGGTGTGGCCAGCCCCCACACATAAATGTCAGTATAGCTACCCCCACCTAAAGATCTGTGGTGGTCCGCACTCACTTAAACAAAGAATTCTTTTCAAGTCTTCTGAAGGAACCAGCCTGCCGACACCTTGACTTGAACCTGATCTACCTGTTTCTGCCCTTCTGGCCTTCAGACTGTAAGAGAATACATGTGTGTTTGTTTTAAAGCTACAAATTTTATGGTAATTGTTACAGACTTCGGGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGCAATTTGAGAAAAAGCCTGGGCAAACATGGCAAGCACTGTCTCTATAAAAAAATACAAAAATAGTTTGGTGTGGTGATGCACACCTATAGTCCCAGCTACTGAGAGCTGAGGTGGGAGGACCACTGAGCCAGGAAGTGGAGGTTGCAGTGAGCCAAGATTGTGCCACTGTGCTCCAGCTGGGCAACAGAGCAAGGCCCTGTCTCAAAAATAAAGTTCTAGTAATTTATTACAGCAGCCGTAGAAGAGTAGGAAACGAATACAGGAGACACAGAGAAGTTTAAATATTTGCCTGAGGCCCTAGGGGCTAGGAAGTAGTTGTTCTAGAATTTTAACATAGACCTCCAGACTCCAAAGCCTAGTTTTCCCATCTACAGTCCAGAGATGGTTGTTGAAGCCTGCGCTTGGCACTTCACTCCTGCACTGAGGTTAACTATTGCTAAATTGATCCTGTTTTTGAGATTGGAGTTTCACTTTGTCGCCCAGTCTTGGAGTGCAATGTGAATCTCGGCTCACCGATCCTCTGCCCTCCCAGGTTCAAGAGATTCTCCTGCCCCAGCCTCCTGAGTAGATGAGATTACAGGTGCCCACCACCATGCCTGGCTAATTTTTGTATTTTTTAATAGAGATGGGGTTTCACCATGTTGGCCAGTCTGATCTCAAACTCCTGACCTCAGGTGATCCACCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCTGATCCTGCTGTTTCTTTCTTTTTTAACTGATTCGTGAAGATGAGGGTCAGAATCCTTGTTGACATGATCCTTTTGGCAGCCACTAGCTGTAACCCCTCAAGGATGGCCTGGGATCAAATCTACCACCTTGAGACCTCATAAGAAGAAAAGCAGCACTATTCTTGGAGCAGCTCTCTTCCGTTGTTTCTCTCTCCTGAGTTTGTAATGCCAGTTCACTTAACAATAACAAAATACTCCTTATAGGCCGCTCTTGCACTTCCGACACTGACCTCTGTTACAGTGGCCTTTACCAACTATGATTATCAAATATCCTAGCTCTTGGCATACATCCTGGAGGACCAGCTCTTTCAATACTGCCTGGCATTCTTCTATCTTTATCACTACCTTAGTTCAGTTTCCTAGAGACAGAGCTGGAGACAGAGGGACTTGCGATGTATGTGATTTCTGGCGGGGAGAAAAGCCTGTGAAAGAGTGAGGGGAGCAGGATAGTTAAGGGCAGGGAGCTATGCAAATGACGCGGATGTGGGTGGTCTCACCTTGAACTACAGCCACCAT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20785:HG2_PB_HySA_5688:HG2_PB_pbsv_3010:HG2_PB_SVrefine2Falcon1plusDovetail_7800:HG2_10X_SVrefine210Xhap12_2279:HG2_PB_SVrefine2PBcRplusDovetail_7238:HG2_PB_SVrefine2PB10Xhap12_2218;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_5688;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0302038;ClusterMaxSizeDiff=0.0291121;ClusterMaxEditDist=0.112445;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=2707;DistBack=-6928;DistForward=31;DistMin=-6928;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:5273936-5273936;PctSeqSimilarity=0.9762;PctSizeSimilarity=0.9905;PctRecOverlap=0.9905;SizeDiff=-26;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=98;MatchId=3546.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:47:0|1:29:9:1:25:./.:0:0:0:0:0/1:26:16:0/1:105:185:.:2786:.
chr3	5606877	HG2_PB_SVrefine2PB10Xhap12_2223	T	TCAGAATGAAACATTCTGACGCCCAGGCTAAAGGAGCAGCAGCTCCTAGAGGAAGCTCTTCTCACACAGTGGTGGAAGGACAGAATGAAACATTCTGACGCCCAGGCTAAAGGAGCAGCAGCTCCTAGAGGAAGCTCTTCTCACACAGTGGTGGAAGGACAGAATGAAACATTCTGAGGCCCAGGCTAAAGGAGCAGCAGCTCCTAGAGGAAGCTCTTCTCACACAGTGGTGGAAGGACAGAATGAAACATTCTGACGCCCAGGCTAAAGGAGCAGCAGCTCCTAGAGGAAGCTCTTCTCACACAGTGGTGGAAGGACAGAATGAAACATTCTGAGGCCCAGGCTAAAGGAGCAGCAGCTCCTAGAGGAAGCTCTTCTCACACAGTGGTGGAAGGACAGAATGAAACATTCTGACGCCCAGGCTAAAGGAGCAGCAGCTCCTAGAGGAAGCTCTTCTCACACAGTGGTGGAAGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1817:HG3_PB_HySA_4649:HG2_PB_assemblyticsfalcon_17168:HG4_PB_pbsv_3026:HG2_PB_SVrefine2Falcon1plusDovetail_7805:HG2_PB_SVrefine2PB10Xhap12_2224:HG2_PB_PB10Xdip_20810:HG2_PB_PB10Xdip_20809:HG3_PB_assemblyticsfalcon_17102:HG4_PB_HySA_4561:HG2_PB_HySA_5695:HG3_PB_SVrefine2Falcon1Dovetail_1872:HG3_PB_pbsv_2979:HG4_PB_SVrefine2PBcRDovetail_1592:HG2_PB_SVrefine2PBcRplusDovetail_7243:HG2_PB_SVrefine2PB10Xhap12_2223:HG2_PB_SVrefine2Falcon2Bionano_1335:HG3_PB_SVrefine2PBcRDovetail_1499;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1335:HG2_PB_SVrefine2PB10Xhap12_2223:HG2_PB_SVrefine2PBcRplusDovetail_7243;NumExactMatchSVs=3;ClusterMaxShiftDist=0.287783;ClusterMaxSizeDiff=0.284163;ClusterMaxEditDist=0.334539;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=474;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=81;REFWIDENED=3:5606878-5606958;PctSeqSimilarity=0.9973;PctSizeSimilarity=1;PctRecOverlap=0.8442;SizeDiff=0;StartDistance=-74;EndDistance=-74;GTMatch=1;TruScore=94;MatchId=3547.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:95:1/1:0:23:0:16:./.:0:0:0:0:1/1:0:24:0/1:3:16:.:.:.
chr3	5830677	HG3_PB_pbsv_2981	T	TTTGCACAGGAATTAATGCAATGAATAAATGGCACAGGAATTAAATGCACAGGAAATAAATGCACAGGAATAAATGCACAAAGGAAAAATGCCAACAGGAATTAAATTTGCACAGGGAATAAATGGCACAGGAATAAACTGACAGGAATAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7806:HG2_PB_HySA_5696:HG3_PB_pbsv_2981:HG2_PB_pbsv_3015;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_2981;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0887372;ClusterMaxSizeDiff=0.0750853;ClusterMaxEditDist=0.220736;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=151;DistBack=2;DistForward=4569;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=158;REFWIDENED=3:5830605-5830762;PctSeqSimilarity=0.9522;PctSizeSimilarity=0.9272;PctRecOverlap=0.4834;SizeDiff=11;StartDistance=73;EndDistance=73;GTMatch=0;TruScore=78;MatchId=3548.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:42:./.:1:0:1:0:./.:0:0:0:0:0/0:44:0:./.:.:.:.:.:.
chr3	6009253	HG2_Ill_GATKHCSBGrefine_1991	T	TCCTTCTTCCCTCCCTTCCTCCCTTGATCCTTCCTTCCCTTCTTTCTTTCCTTCCTTCCTTCCTTCCTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8291:HG4_Ill_GATKHC_4980:HG4_Ill_GATKHCSBGrefine_2073:HG2_Ill_GATKHC_4914:HG2_Ill_GATKHCSBGrefine_1991:HG2_PB_PB10Xdip_20819:HG4_Ill_GATKHCSBGrefine_2072:HG4_PB_pbsv_3027:HG4_Ill_SVrefine2DISCOVARDovetail_2216:HG4_PB_HySA_4563:HG2_PB_pbsv_3016:HG2_PB_SVrefine2Falcon2Bionano_1336:HG4_Ill_GATKHC_4979;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1991:HG2_Ill_GATKHC_4914:HG4_Ill_GATKHCSBGrefine_2073:HG4_Ill_GATKHC_4980;NumExactMatchSVs=4;ClusterMaxShiftDist=0.289474;ClusterMaxSizeDiff=0.289474;ClusterMaxEditDist=0.348993;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=6;DistForward=8;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=179;REFWIDENED=3:6009167-6009345;PctSeqSimilarity=0.9526;PctSizeSimilarity=0.8718;PctRecOverlap=0.4051;SizeDiff=-10;StartDistance=42;EndDistance=42;GTMatch=0;TruScore=74;MatchId=3549.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:31:./.:11:15:6:14:./.:0:0:0:0:0/1:15:7:./.:.:.:.:.:.
chr3	6353058	HG2_Ill_GATKHCSBGrefine_1993	T	TCTCCTTATCCCGAAACCCATTAAAACCTGAAATCCCGAATAGAGATGGAATCACAGCATTCGTTTTGGAGTCAGGAACCTCAGTAAGTTTGAGTTCTTTAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1337:HG4_PB_HySA_4565:HG4_Ill_GATKHC_4985:HG4_Ill_GATKHCSBGrefine_2076:HG4_Ill_250bpfermikitraw_4124:HG2_Ill_GATKHCSBGrefine_1993:HG4_PB_SVrefine2Falcon1Dovetail_1818:HG4_PB_SVrefine2PBcRDovetail_1593:HG4_Ill_SVrefine2DISCOVARDovetail_2218;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1993:HG4_Ill_250bpfermikitraw_4124:HG4_Ill_GATKHCSBGrefine_2076:HG4_Ill_GATKHC_4985;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0196078;ClusterMaxSizeDiff=0.0196078;ClusterMaxEditDist=0.0487805;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=101;DistBack=61112;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=306;REFWIDENED=3:6353029-6353334;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3550.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:21:0|1:36:2:0:17:./.:0:0:0:0:0/1:20:10:./.:.:.:.:.:.
chr3	6430197	HG2_PB_SVrefine2Falcon2Bionano_1338	G	GGCAGGAAGGCTGCTGTCCATGCACCACAGCACGCTCACCGGCTCATGTTGCTTTCAGGATCACCCTGAATGAGCAGGAAGGCTGCTGTCCATGCACCACAGCATGCTCACCGGCTCATGTTGCTTTCAGGATCACCCTGAATGAGCAGGAAGGCTGCTGTCCATGCACCACAGCACGCTCACCGGCTCATGTTGCTTTCAGGATCACCCTGAATGAGCAGGAAGGCTGCTGTCCATGCACCACAGCACGCTCACCGGCTCATGTTGCTTTCAGGATCACCCTGAATGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2225:HG2_PB_pbsv_3018:HG2_PB_SVrefine2PBcRplusDovetail_7244:HG2_PB_SVrefine2Falcon2Bionano_1338:HG2_PB_SVrefine2Falcon1plusDovetail_7807;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7807:HG2_PB_SVrefine2Falcon2Bionano_1338:HG2_PB_SVrefine2PBcRplusDovetail_7244;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0644068;ClusterMaxSizeDiff=0.061017;ClusterMaxEditDist=0.162712;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=288;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=503;REFWIDENED=3:6430198-6430700;PctSeqSimilarity=0.9933;PctSizeSimilarity=1;PctRecOverlap=0.1799;SizeDiff=0;StartDistance=-237;EndDistance=-237;GTMatch=0;TruScore=72;MatchId=3551.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:49:./.:9:21:18:8:./.:0:0:0:0:0/1:5:4:./.:.:.:.:.:.
chr3	6525397	HG2_PB_SVrefine2Falcon2Bionano_1339	T	TTGGCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_4566:HG2_PB_pbsv_3020:HG2_PB_HySA_5705:HG3_PB_assemblyticsfalcon_17106:HG2_PB_assemblyticsfalcon_17175:HG4_PB_pbsv_3031:HG4_Ill_GATKHCSBGrefine_2077:HG4_PB_SVrefine2PBcRDovetail_1595:HG2_PB_SVrefine2Falcon2Bionano_1339:HG4_Ill_MetaSV_3272:HG4_PB_SVrefine2Falcon1Dovetail_1819:HG3_PB_SVrefine2Falcon1Dovetail_1873:HG2_PB_SVrefine2Falcon1plusDovetail_7808;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1339:HG4_PB_SVrefine2PBcRDovetail_1595;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0479705;ClusterMaxSizeDiff=0.0442804;ClusterMaxEditDist=0.130199;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=270;DistBack=0;DistForward=1;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:6525398-6525411;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:27:0|1:24:2:0:16:./.:0:0:0:0:0/1:35:9:./.:.:.:.:.:.
chr3	7130370	HG3_Ill_MetaSV_3313	T	TCACTGATTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAACTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_pbsv_3027:HG2_PB_assemblyticsfalcon_17180:HG4_PB_pbsv_3037:HG4_PB_HySA_4572:HG3_PB_pbsv_2987:HG4_Ill_MetaSV_3275:HG4_PB_SVrefine2Falcon1Dovetail_1824:HG3_PB_SVrefine2PBcRDovetail_1502:HG2_PB_SVrefine2Falcon1plusDovetail_7813:HG4_Ill_GATKHCSBGrefine_2094:HG3_Ill_MetaSV_3313:HG3_Ill_GATKHCSBGrefine_2004:HG2_Ill_MetaSV_3155:HG2_Ill_GATKHCSBGrefine_2008:HG3_PB_HySA_4658:HG2_PB_HySA_5714;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2008:HG2_Ill_MetaSV_3155:HG3_Ill_GATKHCSBGrefine_2004:HG3_Ill_MetaSV_3313:HG4_Ill_GATKHCSBGrefine_2094:HG4_Ill_MetaSV_3275;NumExactMatchSVs=6;ClusterMaxShiftDist=0.145286;ClusterMaxSizeDiff=0.145286;ClusterMaxEditDist=0.274627;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=13164;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=3:7130371-7130382;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3553.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:21:29:0|1:21:1:0:21:./.:0:0:0:0:0/1:33:11:./.:4:49:.:.:.
chr3	7133388	HG2_PB_HySA_5715	T	TAAATAACTTAATTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_4573:HG2_PB_pbsv_3028:HG4_PB_pbsv_3038:HG3_PB_pbsv_2988:HG2_PB_assemblyticsfalcon_17181:HG3_PB_assemblyticsfalcon_17110:HG3_PB_HySA_4659:HG2_PB_HySA_5715:HG3_PB_SVrefine2PBcRDovetail_1503:HG2_PB_SVrefine2Falcon1plusDovetail_7814:HG3_Ill_GATKHCSBGrefine_2005:HG4_PB_SVrefine2Falcon1Dovetail_1825:HG2_PB_SVrefine2PBcRplusDovetail_7247:HG3_PB_SVrefine2Falcon1Dovetail_1876;NumClusterSVs=14;ExactMatchIDs=HG2_PB_HySA_5715;NumExactMatchSVs=1;ClusterMaxShiftDist=0.172684;ClusterMaxSizeDiff=0.166405;ClusterMaxEditDist=0.220395;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=335;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=3:7133389-7133401;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.9911;PctRecOverlap=0.9882;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3554.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:49:0|1:29:1:0:33:./.:0:0:0:0:0/1:28:12:0/1:10:36:.:.:.
chr3	7318472	HG2_Ill_250bpfermikitraw_4101	T	TCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCTTCCCTTCCTTCCTTCCCTCCCTCCCTCCCTCCTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20900:HG2_PB_assemblyticsfalcon_17185:HG3_PB_assemblyticsfalcon_17114:HG4_PB_HySA_4577:HG3_PB_HySA_4661:HG2_PB_pbsv_3029:HG4_Ill_GATKHCSBGrefine_2095:HG4_Ill_250bpfermikitraw_4135:HG4_Ill_150bpfermikitraw_3972:HG3_Ill_Krunchall_4137:HG3_Ill_GATKHC_5024:HG3_Ill_GATKHCSBGrefine_2006:HG3_Ill_250bpfermikitraw_4014:HG2_Ill_SpiralSDKrefine_10755:HG2_Ill_Krunchall_4168:HG2_Ill_GATKHC_4929:HG2_Ill_GATKHCSBGrefine_2009:HG2_Ill_250bpfermikitraw_4101:HG2_PB_HySA_5720:HG2_PB_PB10Xdip_20901;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4101:HG2_Ill_GATKHCSBGrefine_2009:HG2_Ill_GATKHC_4929:HG2_Ill_Krunchall_4168:HG2_Ill_SpiralSDKrefine_10755:HG3_Ill_250bpfermikitraw_4014:HG3_Ill_GATKHCSBGrefine_2006:HG3_Ill_GATKHC_5024:HG3_Ill_Krunchall_4137:HG4_Ill_150bpfermikitraw_3972:HG4_Ill_250bpfermikitraw_4135:HG4_Ill_GATKHCSBGrefine_2095;NumExactMatchSVs=12;ClusterMaxShiftDist=0.137405;ClusterMaxSizeDiff=0.137405;ClusterMaxEditDist=0.191176;PBcalls=8;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=41;REFWIDENED=3:7318451-7318491;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:82:1/1:1:8:0:21:./.:0:0:0:0:1/1:1:19:./.:.:.:.:.:.
chr3	8115708	HG3_PB_SVrefine2Falcon1Dovetail_1881	A	AATATAGTTATATATACATACTATATGTAAATGTATATATACATATTATATGTACACATGTATATATGTATATATACATATTATATGTACACATGTATATATGTATATATACATATATATATGTACACATGTATATGTATATATACATATTATATGTACACATGTATATATGTAATATACATATTATATGTACACATGT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1881:HG2_PB_HySA_5734:HG2_PB_pbsv_3038:HG2_PB_SVrefine2Falcon2Bionano_1345;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1881;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0589681;ClusterMaxSizeDiff=0.044226;ClusterMaxEditDist=0.158654;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=198;DistBack=216;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=284;REFWIDENED=3:8115709-8115992;PctSeqSimilarity=0.9735;PctSizeSimilarity=0.9706;PctRecOverlap=0.7756;SizeDiff=-6;StartDistance=-43;EndDistance=-43;GTMatch=0;TruScore=90;MatchId=3556.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:36:0|1:44:5:5:24:./.:0:0:0:0:0/1:35:23:./.:.:.:.:.:.
chr3	9128410	HG2_Ill_GATKHCSBGrefine_2023	A	AATATGTATTTTATATGTATATATGTATTACATATACATATAATATGTATTTTATATGTATATATGTATTACATATACAT	20	PASS	ClusterIDs=HG2_PB_HySA_5750:HG4_PB_pbsv_3056:HG2_PB_pbsv_3049:HG4_Ill_svaba_3825:HG4_Ill_scalpel_2849:HG4_Ill_Krunchall_4372:HG4_Ill_GATKHC_5018:HG4_Ill_GATKHCSBGrefine_2108:HG4_Ill_250bpfermikitraw_4152:HG4_Ill_150bpfermikitraw_3985:HG2_Ill_svaba_3744:HG2_Ill_Krunchall_4189:HG2_Ill_GATKHC_4954:HG2_Ill_GATKHCSBGrefine_2023:HG2_Ill_250bpfermikitraw_4123:HG4_PB_HySA_4591;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4123:HG2_Ill_GATKHCSBGrefine_2023:HG2_Ill_GATKHC_4954:HG2_Ill_Krunchall_4189:HG2_Ill_svaba_3744:HG4_Ill_150bpfermikitraw_3985:HG4_Ill_250bpfermikitraw_4152:HG4_Ill_GATKHCSBGrefine_2108:HG4_Ill_GATKHC_5018:HG4_Ill_Krunchall_4372:HG4_Ill_scalpel_2849:HG4_Ill_svaba_3825;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0843373;ClusterMaxSizeDiff=0.0722892;ClusterMaxEditDist=0.191617;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=79;DistBack=-29;DistForward=8;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=95;REFWIDENED=3:9128398-9128492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3557.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:29:0|1:40:3:0:25:./.:0:0:0:0:0/1:19:23:./.:.:.:.:.:.
chr3	9341836	HG2_PB_SVrefine2Falcon2Bionano_1353	A	ACCACCACCATCATCATCTTCATCATCACCACCACCACCATCATCACTACTGCCACCATCATCTTCATCATCACCACCACCATCATCTTCATCACCACCACCACCATCATCTTCATCACCACCACCATCATCACTACTGCCACCATCATCATCATAACCACCATCATCACTACCACCACCACCACCTCCACCATTATTATCACCACCACCACCACAACCACTATCACCACCACTACCATCATCATCATTACCATCATCATCACTACCATCACCACCACCACCACCATCATCACCACCACTACCATCATCATCATTACCAACATCATCACCACCATCACCACCTCCACCATCACCATCACCACCACCACCATCATTACCAACATCACCACCATCACCACCACCACCACCTCCACCATCATCACCACCACCACCATCATCACCACCACCACCATCACCATCACCACCACCACCATCATCACCACCACCACCATCACCATCACCACCACCACCATCACCACCACCACCACCTCCATCACCACCTCCATCACCATCACCACCACCTCCACCATCATCACCACCACCACCATCATCACCACCACCACCATCACCACCACCATCATCACCACCACCACCACCACCACCATCACCACCACCACCACCATCATCATCACCACCACCATCATCATCATCACCACCACTACCC	20	PASS	ClusterIDs=HG4_PB_pbsv_3058:HG3_PB_pbsv_3008:HG3_PB_HySA_4681:HG4_PB_HySA_4593:HG2_PB_HySA_5752:HG2_PB_PB10Xdip_21140:HG2_Ill_breakscan11_3281:HG2_Ill_MetaSV_3161:HG2_PB_pbsv_3050:HG2_PB_assemblyticsfalcon_17210:HG3_PB_assemblyticsfalcon_17138:HG2_PB_SVrefine2Falcon1plusDovetail_7827:HG2_PB_SVrefine2PBcRplusDovetail_7259:HG2_PB_SVrefine2PB10Xhap12_2241:HG2_PB_SVrefine2Falcon2Bionano_1353:HG4_PB_SVrefine2Falcon1Dovetail_1835:HG3_PB_SVrefine2PBcRDovetail_1511:HG3_PB_SVrefine2Falcon1Dovetail_1886:HG4_PB_SVrefine2PBcRDovetail_1609;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1353:HG2_PB_SVrefine2PB10Xhap12_2241:HG2_PB_SVrefine2PBcRplusDovetail_7259;NumExactMatchSVs=3;ClusterMaxShiftDist=0.149188;ClusterMaxSizeDiff=0.141802;ClusterMaxEditDist=0.222883;PBcalls=17;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=702;DistBack=37617;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=3:9341837-9341869;PctSeqSimilarity=0.9966;PctSizeSimilarity=1;PctRecOverlap=0.9687;SizeDiff=0;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=98;MatchId=3558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:1:11:1:27:./.:0:0:0:0:1/1:0:19:1/1:1:163:.:.:.
chr3	10175818	HG2_Ill_GATKHCSBGrefine_2025	T	TGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCATGTCACTGCACTCCTCTTGGGCAACAAGAGTGAAACTCCGTCTCAAAAAAAAAAAAAAGAAAGAAAAAGAAAAAAAGAAGATAAATACTGCATGTTCTCACTTATATGTGGAATTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTATCACCCAGGCTGAAGTGCAGTGGCGTGATCTCAGCTCACCGCCACCTCTGCTGCCTGGGTTCAAGCGATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCACAGCGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTCCACCATCTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCCGGCCGGAATCTTTAAAATAAACTGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATTACCTCAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGAAGAAACCCTGTCTCTAATAAAAATACAAAATTAGCCAGGCGTGGTGGCGCATGACTATAATCCTAGCTACTCG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2301:HG2_PB_pbsv_3052:HG2_PB_HySA_5756:HG3_Ill_MetaSV_3320:HG4_PB_pbsv_3062:HG2_PB_HySA_5755:HG3_PB_HySA_4684:HG3_PB_pbsv_3010:HG4_Ill_MetaSV_3284:HG3_Ill_GATKHCSBGrefine_2018:HG2_Ill_MetaSV_3162:HG2_Ill_GATKHCSBGrefine_2025:HG4_PB_HySA_4599:HG2_Ill_breakscan11_3283:HG2_PB_PB10Xdip_19800:HG3_PB_SVrefine2Falcon1Dovetail_1888:HG4_PB_SVrefine2Falcon1Dovetail_1837:HG2_PB_SVrefine2Falcon1plusDovetail_7829:HG2_PB_SVrefine2Falcon2Bionano_1355:HG3_PB_SVrefine2PBcRDovetail_1513:HG2_PB_SVrefine2PBcRplusDovetail_7261:HG2_PB_SVrefine2PB10Xhap12_2243:HG4_PB_SVrefine2PBcRDovetail_1611;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2025:HG2_Ill_MetaSV_3162:HG3_Ill_GATKHCSBGrefine_2018:HG4_Ill_MetaSV_3284;NumExactMatchSVs=4;ClusterMaxShiftDist=0.035503;ClusterMaxSizeDiff=0.035503;ClusterMaxEditDist=0.268026;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=668;DistBack=-109;DistForward=41776;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=280;REFWIDENED=3:10175648-10175927;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3559.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:79:1/1:0:12:0:10:./.:0:0:0:0:1/1:0:39:1/1:6:124:.:768:.
chr3	10266412	HG2_PB_SVrefine2Falcon2Bionano_1356	C	CCATCCATCCATCCACCCACCCACCCACCCATCCATCCACCCACCCACCTGTCCACCCATCCATCCACCCACCCACCCACCCATCCATCCACCCACCCACCCACCCATCCATCCACCCACCCACCCACCCATCCATCCACCCACCCACCCACCCATCCATCCACCCACCCACCCACCCATCCATCCACCCACCCACCTGTCCACCCATGTACCCACCCTCCCACCAACCCACCCACCCATCCATTTATCCACCTACCCACA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7830:HG3_PB_assemblyticsfalcon_17144:HG2_PB_pbsv_3053:HG2_PB_HySA_5758:HG4_PB_HySA_4601:HG2_PB_PB10Xdip_19801:HG3_PB_SVrefine2Falcon1Dovetail_1889:HG4_PB_HySA_4600:HG3_PB_SVrefine2PBcRDovetail_1514:HG3_PB_pbsv_3011:HG2_PB_SVrefine2Falcon2Bionano_1356:HG4_PB_SVrefine2PBcRDovetail_1612:HG4_PB_pbsv_3063:HG4_PB_SVrefine2Falcon1Dovetail_1838:HG2_PB_HySA_5757:HG2_PB_SVrefine2PBcRplusDovetail_7262:HG2_PB_SVrefine2PB10Xhap12_2244;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1356:HG3_PB_SVrefine2PBcRDovetail_1514;NumExactMatchSVs=2;ClusterMaxShiftDist=0.217659;ClusterMaxSizeDiff=0.217659;ClusterMaxEditDist=0.349206;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=260;DistBack=-69;DistForward=-1;DistMin=-69;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=3:10266413-10266481;PctSeqSimilarity=0.9775;PctSizeSimilarity=0.9846;PctRecOverlap=0.9617;SizeDiff=4;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=97;MatchId=3560.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:1:18:2:15:./.:0:0:0:0:1/1:0:15:./.:.:.:.:.:.
chr3	10282976	HG3_PB_SVrefine2Falcon1Dovetail_1890	A	ACTCACGCCTGTAATCCCAGCACTTTGGGAGCCCCAGGCGGGTGGATCACTTGAGGTCAGGAGTTCGAGACTAGCCTGGCCAATGTCGTGAAACCCTGTCTCTACTAAAAATACAGAAAAAAAAAAAAAAAAAGGCCAGGCCTGGTGG	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3286:HG3_PB_assemblyticsfalcon_17145:HG4_PB_SVrefine2Falcon1Dovetail_1839:HG2_PB_HySA_5759:HG4_Ill_SVrefine2DISCOVARDovetail_2238:HG3_PB_SVrefine2Falcon1Dovetail_1890:HG4_PB_SVrefine2PBcRDovetail_1613:HG4_PB_HySA_4602:HG4_PB_pbsv_3064:HG2_PB_pbsv_3054;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1890:HG4_Ill_SVrefine2DISCOVARDovetail_2238;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0927152;ClusterMaxSizeDiff=0.0927152;ClusterMaxEditDist=0.238411;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=147;DistBack=16556;DistForward=116;DistMin=116;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=131;REFWIDENED=3:10282963-10283093;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:16:0|1:31:2:2:14:./.:0:0:0:0:0/1:25:12:./.:.:.:.:.:.
chr3	10407504	HG2_PB_SVrefine2PBcRplusDovetail_7263	G	GTGTGTGTTGTATGTGCACAGTAGGTGGTGTACACGTGTTGTGTGTTTGATGTGTGTGATATGCGGTGTATATGTGTTGTGCAGTGTGTGTGATGAGTGGTGTGTATGGTGTATGTTGTATGTGTGTGGTGAGTGTTGTGTTTGTGTGTGATGAGTGGTGTGTGTGGTGTGTGTTGTATGTGCATGACATGTGTGGTCTGTGTGTTGTATGTGTGGTGAGTGGTATGTGTGATGTGTTTGTGACGTGTATTGTGTGTGGTGAGTGGTGTGTGTATGCTGTGTGTGGAGTGTTGTGTGTGGTGTTTTTTTGTGTGGTAATGTGGTATATGTGTGTTGTGTGTGATGAGTGGTGTATGTATTTTGTGTATGTAGTGTGTGTTGTTATGTGCATGGTAGGTGCTGTATGTGTGTTATGTGTGTGATAAGTGATGTGTGTCATGAGTGGTGTATGTGTGCTGCCATGTGTTGTATGTGTGGTGTGTGTGATGTGTTGTCTGTTTTGTGAGTGTTGTGTGTGTGTTGTTATACGTGTGCTGTATGTGGTGTGTGTAGTGAGTGGTATGCGTGGTGTATGTTGTATGTGCATGGTAGGTGGTGTATGTGTGTGGTGTGTTGTATGTGTTATATGTGTGGTAAGTGTTGTGTGTGTGTTGTATGTGTGTGGTAGGTGGTAGGTGGTATATGTGTGTTGTGTGTTTGTGTGATGTGTGTGTTGTGTGTGTGGTAGGTGGTATGTGTGCTGTGTGTTTGCATGATGGGTGTGGTGAGTGGTGTGTTGTGTTGTGTGTGCATGATGGGTGGTGTATGTGTGGTCTGTGTGATGAGTGGTGTGTTTTGTGTATGTGGTGTGTGTTGTATGTGTGTCGTAGGTGTTGTGTGTGTGTTGTGTGTTGTATGTGTGTGGTAAGTGGTATATGTGTGTTGTGTGTTTGTGTGATGTGTGTGTTGTGTGTTGTGTGTGTGGTAGGTGGTGTATGTGTGTTGTGTGTTTGCGTGATGTGTGTGGTGAGTGGTGTGTAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7831:HG2_PB_pbsv_3055:HG3_PB_pbsv_3012:HG4_PB_HySA_4604:HG4_PB_pbsv_3065:HG2_Ill_MetaSV_3163:HG4_Ill_MetaSV_3287:HG4_Ill_GATKHCSBGrefine_2111:HG3_Ill_MetaSV_3321:HG3_Ill_GATKHCSBGrefine_2019:HG2_Ill_GATKHCSBGrefine_2027:HG4_PB_HySA_4603:HG2_PB_PB10Xdip_19802:HG2_Ill_breakscan11_3284:HG3_PB_assemblyticsfalcon_17146:HG2_PB_assemblyticsfalcon_17218:HG3_PB_SVrefine2Falcon1Dovetail_1891:HG4_PB_SVrefine2PBcRDovetail_1614:HG4_Ill_SVrefine2DISCOVARDovetail_2239:HG3_PB_SVrefine2PBcRDovetail_1515:HG3_Ill_SVrefine2DISCOVARDovetail_2219:HG2_PB_SVrefine2PBcRplusDovetail_7263:HG2_PB_SVrefine2PB10Xhap12_2245:HG2_PB_SVrefine2Falcon2Bionano_1357:HG2_Ill_SVrefine2DISCOVARplusDovetail_8310:HG4_PB_SVrefine2Falcon1Dovetail_1840;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8310:HG2_PB_SVrefine2Falcon2Bionano_1357:HG2_PB_SVrefine2PB10Xhap12_2245:HG2_PB_SVrefine2PBcRplusDovetail_7263:HG3_Ill_SVrefine2DISCOVARDovetail_2219:HG3_PB_SVrefine2PBcRDovetail_1515:HG4_Ill_SVrefine2DISCOVARDovetail_2239:HG4_PB_SVrefine2PBcRDovetail_1614;NumExactMatchSVs=8;ClusterMaxShiftDist=0.150272;ClusterMaxSizeDiff=0.150272;ClusterMaxEditDist=0.220465;PBcalls=16;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=1019;DistBack=42237;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=3:10407505-10407557;PctSeqSimilarity=0.999;PctSizeSimilarity=1;PctRecOverlap=0.9902;SizeDiff=0;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=99;MatchId=3562.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:81:./.:1:2:0:3:./.:0:0:0:0:1/1:0:28:1/1:10:204:.:1069:.
chr3	11204173	HG2_PB_PB10Xdip_19836	G	CTACTGTCGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCGGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAC	20	PASS	ClusterIDs=HG2_PB_HySA_5763:HG4_PB_HySA_4608:HG3_PB_pbsv_3016:HG2_PB_pbsv_3059:HG4_PB_pbsv_3068:HG4_Ill_MetaSV_3288:HG3_Ill_GATKHCSBGrefine_2022:HG3_PB_HySA_4688:HG2_PB_PB10Xdip_19837:HG2_PB_PB10Xdip_19836:HG3_Ill_MetaSV_3323:HG2_Ill_MetaSV_3165:HG2_PB_assemblyticsfalcon_17222:HG4_PB_assemblyticsfalcon_16851:HG3_PB_assemblyticsfalcon_17148:HG2_PB_SVrefine2Falcon2Bionano_1359:HG2_PB_SVrefine2Falcon1plusDovetail_7834:HG2_PB_SVrefine2PBcRplusDovetail_7266:HG2_PB_SVrefine2PB10Xhap12_2249:HG4_PB_SVrefine2Falcon1Dovetail_1842:HG4_PB_SVrefine2PBcRDovetail_1616:HG2_10X_SVrefine210Xhap12_2309:HG3_PB_SVrefine2PBcRDovetail_1519:HG3_PB_SVrefine2Falcon1Dovetail_1893:HG4_PB_HySA_4607;NumClusterSVs=25;ExactMatchIDs=HG2_PB_PB10Xdip_19836:HG2_PB_PB10Xdip_19837;NumExactMatchSVs=2;ClusterMaxShiftDist=0.141732;ClusterMaxSizeDiff=0.141732;ClusterMaxEditDist=0.190476;PBcalls=20;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=318;DistBack=-7;DistForward=4013;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:11204166-11204180;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=0.9749;SizeDiff=0;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=99;MatchId=3563.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:94:1/1:0:32:0:30:./.:0:0:0:0:1/1:1:27:1/1:3:91:.:.:.
chr3	11641061	HG2_PB_SVrefine2Falcon2Bionano_1361	C	CGGCTCACTGCAAGCTCCGACTCCCGCATTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCTTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCCTTCTTTTTTTTTTTTTTTTTTTAAGACAGAGTCGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGCCTCCACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAGTCTCAGCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1844:HG2_PB_pbsv_3064:HG4_PB_HySA_4612:HG3_PB_pbsv_3020:HG2_PB_PB10Xdip_19854:HG2_PB_PB10Xdip_19855:HG4_PB_pbsv_3072:HG3_PB_SVrefine2Falcon1Dovetail_1896:HG4_PB_SVrefine2PBcRDovetail_1618:HG2_PB_SVrefine2PB10Xhap12_2251:HG3_PB_SVrefine2PBcRDovetail_1522:HG2_PB_SVrefine2PBcRplusDovetail_7268:HG2_PB_SVrefine2Falcon2Bionano_1361:HG2_PB_SVrefine2Falcon1plusDovetail_7836;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1361:HG2_PB_SVrefine2PBcRplusDovetail_7268:HG3_PB_SVrefine2PBcRDovetail_1522;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0548885;ClusterMaxSizeDiff=0.0548885;ClusterMaxEditDist=0.271416;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=572;DistBack=26270;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=234;REFWIDENED=3:11641062-11641295;PctSeqSimilarity=0.9991;PctSizeSimilarity=1;PctRecOverlap=0.9773;SizeDiff=0;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=99;MatchId=3564.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:0:24:0:18:./.:0:0:0:0:1/1:0:23:1/1:5:89:.:.:.
chr3	11700106	HG3_Ill_MetaSV_3324	T	TCCTGGATCTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGGGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATATTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7838:HG2_PB_HySA_5768:HG3_PB_HySA_4694:HG2_PB_pbsv_3067:HG2_PB_HySA_5767:HG3_PB_assemblyticsfalcon_17158:HG2_PB_assemblyticsfalcon_17230:HG3_PB_pbsv_3022:HG3_Ill_SVrefine2DISCOVARDovetail_2226:HG3_Ill_MetaSV_3324:HG3_Ill_GATKHCSBGrefine_2025:HG3_PB_SVrefine2PBcRDovetail_1524:HG4_PB_SVrefine2Falcon1Dovetail_1845:HG3_PB_SVrefine2Falcon1Dovetail_1897;NumClusterSVs=14;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_2025:HG3_Ill_MetaSV_3324:HG3_Ill_SVrefine2DISCOVARDovetail_2226;NumExactMatchSVs=3;ClusterMaxShiftDist=0.152846;ClusterMaxSizeDiff=0.152846;ClusterMaxEditDist=0.221519;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=8679;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=3:11700107-11700123;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:32:./.:9:14:27:6:./.:0:0:0:0:0/1:31:13:0/1:5:22:.:.:.
chr3	12136782	HG2_PB_SVrefine2PB10Xhap12_2256	A	AGCCCGTAATCCTAGCACATTGGGAGGCCGAGGCAGGTGGATCACAAGGTCAGGAGATCATCGAGACCATCCTGGCTAACACAGTGAAACCTCGTCTCTACTAAAAAATACAAAAAATTAGCTGGGCATGGTGGCGGGCACCTGTAGTCCTAGCTACTCGGGAGACTGAGGGGCAGGAGAATGGTGTGAACCCGGGAGTCAGAGCTTTCAGTGAGCTGAGATGGCGCCACTGCACTCCAGCCTGGGCGACAAAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATTGGCCGGGCACGGTGGCTTAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1527:HG3_PB_pbsv_3026:HG2_PB_PB10Xdip_19865:HG2_PB_PB10Xdip_19864:HG2_PB_HySA_5772:HG3_PB_HySA_4696:HG4_PB_HySA_4614:HG4_PB_pbsv_3079:HG4_PB_SVrefine2Falcon1Dovetail_1848:HG2_PB_SVrefine2Falcon1plusDovetail_7842:HG3_PB_SVrefine2Falcon1Dovetail_1900:HG2_PB_SVrefine2PBcRplusDovetail_7273:HG2_PB_SVrefine2PB10Xhap12_2256:HG4_PB_SVrefine2PBcRDovetail_1623:HG2_PB_SVrefine2Falcon2Bionano_1366;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2256:HG2_PB_SVrefine2PBcRplusDovetail_7273:HG3_PB_SVrefine2Falcon1Dovetail_1900;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0269865;ClusterMaxSizeDiff=0.0238806;ClusterMaxEditDist=0.206897;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=333;DistBack=43854;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=291;REFWIDENED=3:12136783-12137073;PctSeqSimilarity=0.9601;PctSizeSimilarity=0.9881;PctRecOverlap=0.2433;SizeDiff=-4;StartDistance=-253;EndDistance=-253;GTMatch=0;TruScore=73;MatchId=3566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:81:./.:0:6:0:2:./.:0:0:0:0:1/1:0:20:1/1:2:39:.:.:.
chr3	12604987	HG4_Ill_SVrefine2DISCOVARDovetail_2254	T	TTTTTTTTTTTTTTTTTCCTGAGACGGAGTCTCACTCTGTCGCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAGCCTCCGCCTCCTGAGTTCAAGCGATTCTCATGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGCACCTGCCACCATGCCCGGCTACTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCTACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACGGGTGTGAGCCACCATGCCCTGCTGGGCCCCAGATTTTTAAAGTACATGTATGTATATATTTATAATCTTTTACCAAAATGAGATCATACTGTATATACTGGTTTAAAAAATTTTATGTGGGCTGGGCGCAGTAGCTCACTTCTGTAATCCCAGCACTCTGGGAGGCCAAGGTGGGCAGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCATCTTTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGGGTGCTTGTAATCCCAGCTACTTCGGAGGCTGAGGCAGGTGAACGCTTGAACTTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCATGTCACTACACTCCAGCCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAATCATTGTAAAATTTCCATAAAATTTACCATCTTAACCATTTTTAAGTTATAGTTCTGTCACGTGCATTCACATTGTTGTGTAACCAATCTCCAGAGCTCTTTATCTTGCATAACTGAAACTCTGTACTACCCATTAAAAAACTTCCATTTCTCCCATCCCCAGCCTCTGACACCTGGCATTCGACTGTCTGTCCCTATGAATTTGACTACTCTAGGGACCTCACAGAAGTGGAGTCGTGACTGGTTTATTTTACTTAGCGTCATGTCCTCAAGGTTCATGCATGTTGCAGCGTGTGTCAGAATCACC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2319:HG4_PB_pbsv_3081:HG3_PB_pbsv_3029:HG2_PB_PB10Xdip_19878:HG2_PB_pbsv_3075:HG2_PB_PB10Xdip_19879:HG4_Ill_GATKHCSBGrefine_2116:HG3_Ill_GATKHCSBGrefine_2028:HG2_Ill_GATKHCSBGrefine_2038:HG4_Ill_MetaSV_3291:HG2_Ill_MetaSV_3167:HG2_PB_HySA_5778:HG4_PB_SVrefine2PBcRDovetail_1626:HG3_PB_SVrefine2Falcon1Dovetail_1902:HG2_PB_SVrefine2PBcRplusDovetail_7276:HG2_PB_SVrefine2PB10Xhap12_2259:HG4_PB_SVrefine2Falcon1Dovetail_1850:HG2_PB_SVrefine2Falcon2Bionano_1368:HG2_PB_SVrefine2Falcon1plusDovetail_7844:HG3_PB_SVrefine2PBcRDovetail_1530:HG4_Ill_SVrefine2DISCOVARDovetail_2254:HG3_Ill_SVrefine2DISCOVARDovetail_2234:HG2_Ill_SVrefine2DISCOVARplusDovetail_8324;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2319:HG4_Ill_SVrefine2DISCOVARDovetail_2254:HG3_Ill_SVrefine2DISCOVARDovetail_2234:HG2_Ill_SVrefine2DISCOVARplusDovetail_8324;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0521141;ClusterMaxSizeDiff=0.0491642;ClusterMaxEditDist=0.207029;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=996;DistBack=9935;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=290;REFWIDENED=3:12604988-12605277;PctSeqSimilarity=0.9845;PctSizeSimilarity=0.998;PctRecOverlap=0.7748;SizeDiff=-2;StartDistance=-224;EndDistance=-224;GTMatch=0;TruScore=91;MatchId=3567.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:84:1/1:0:17:0:21:./.:0:0:0:0:./.:0:6:0/1:20:135:.:1185:.
chr3	12818452	HG3_Ill_MetaSV_3326	A	AGGGGCTATTGTTTATTTATTTATTTATTTATTTATTTTTTTATTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGTCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGGCACCGCGCCCGGCT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_2039:HG2_PB_HySA_5780:HG2_PB_pbsv_3076:HG3_PB_pbsv_3031:HG4_PB_pbsv_3082:HG2_PB_assemblyticsfalcon_17243:HG4_PB_HySA_4619:HG2_PB_HySA_5779:HG4_Ill_MetaSV_3292:HG4_Ill_GATKHCSBGrefine_2117:HG3_Ill_manta_676:HG3_Ill_MetaSV_3326:HG3_Ill_GATKHCSBGrefine_2029:HG2_PB_SVrefine2Falcon1plusDovetail_7845:HG2_Ill_MetaSV_3168;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2039:HG4_Ill_MetaSV_3292:HG4_Ill_GATKHCSBGrefine_2117:HG3_Ill_manta_676:HG3_Ill_MetaSV_3326:HG3_Ill_GATKHCSBGrefine_2029:HG2_PB_SVrefine2Falcon1plusDovetail_7845:HG2_Ill_MetaSV_3168;NumExactMatchSVs=8;ClusterMaxShiftDist=0.135294;ClusterMaxSizeDiff=0.135294;ClusterMaxEditDist=0.168889;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=339;DistBack=2;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:12818453-12818468;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:49:54:0|1:47:3:0:36:./.:0:0:0:0:0/1:27:16:0/1:5:34:.:.:.
chr3	13195960	HG3_Ill_GATKHC_5068	T	TATATATATATATATATATATACACACATACATATATATATATACACACAC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3840:HG4_PB_pbsv_3083:HG3_PB_assemblyticsfalcon_17170:HG2_PB_assemblyticsfalcon_17245:HG2_PB_HySA_5784:HG4_Ill_GATKHC_5041:HG4_Ill_GATKHCSBGrefine_2118:HG4_Ill_250bpfermikitraw_4177:HG4_Ill_150bpfermikitraw_4008:HG3_Ill_Krunchall_4174:HG3_Ill_GATKHC_5068:HG3_Ill_GATKHCSBGrefine_2030:HG3_Ill_150bpfermikitraw_3922:HG2_Ill_GATKHC_4975:HG2_Ill_GATKHCSBGrefine_2040;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3840:HG3_Ill_Krunchall_4174:HG3_Ill_GATKHC_5068:HG3_Ill_GATKHCSBGrefine_2030:HG3_Ill_150bpfermikitraw_3922:HG2_Ill_GATKHC_4975:HG2_Ill_GATKHCSBGrefine_2040;NumExactMatchSVs=7;ClusterMaxShiftDist=0.234234;ClusterMaxSizeDiff=0.234234;ClusterMaxEditDist=0.252252;PBcalls=4;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=22;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=3:13195941-13195976;PctSeqSimilarity=0.9273;PctSizeSimilarity=0.8621;PctRecOverlap=0.8644;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=88;MatchId=3569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:./.:13:11:7:18:./.:0:0:0:0:0/1:24:15:./.:.:.:.:.:.
chr3	13491543	HG3_PB_SVrefine2Falcon1Dovetail_1903	T	AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAGAAAAGAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAGAAAAGAAAAGAGAAAAGAAAGAAAAGAAAAGAAGAAAAGAAAAGAAAAAG	10	PASS	ClusterIDs=HG4_PB_pbsv_3084:HG2_PB_SVrefine2Falcon2Bionano_1369:HG3_PB_assemblyticsfalcon_17173:HG3_PB_SVrefine2Falcon1Dovetail_1903:HG2_PB_assemblyticsfalcon_17249:HG2_PB_SVrefine2Falcon1plusDovetail_7846:HG2_PB_pbsv_3078;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1903:HG3_PB_assemblyticsfalcon_17173;NumExactMatchSVs=2;ClusterMaxShiftDist=0.108216;ClusterMaxSizeDiff=0.108216;ClusterMaxEditDist=0.271457;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=235;DistBack=24;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=3:13491544-13491547;PctSeqSimilarity=0.9473;PctSizeSimilarity=0.9631;PctRecOverlap=0.8776;SizeDiff=-9;StartDistance=25;EndDistance=25;GTMatch=0;TruScore=92;MatchId=3570.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:27:0|1:39:2:2:24:./.:0:0:0:0:0/1:34:12:./.:.:.:.:.:.
chr3	13753249	HG3_Ill_GATKHC_5081	G	GGAGGGAACTGAGGGGACCCCCATGTGAAGAGTCTGATCTACCACTGTGATGGGAGCATGT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_19937:HG2_PB_pbsv_3080:HG2_PB_HySA_5794:HG4_PB_pbsv_3086:HG4_Ill_Krunchall_4401:HG3_PB_pbsv_3035:HG4_Ill_GATKHC_5054:HG4_Ill_GATKHCSBGrefine_2123:HG4_Ill_250bpfermikitraw_4186:HG4_Ill_150bpfermikitraw_4016:HG3_Ill_Krunchall_4185:HG3_Ill_GATKHC_5081:HG3_Ill_GATKHCSBGrefine_2034:HG2_Ill_GATKHC_4987:HG2_Ill_GATKHCSBGrefine_2044:HG2_Ill_250bpfermikitraw_4157:HG2_Ill_150bpfermikitraw_3847:HG2_PB_assemblyticsfalcon_17252:HG2_PB_PB10Xdip_19938;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3847:HG2_Ill_250bpfermikitraw_4157:HG2_Ill_GATKHCSBGrefine_2044:HG2_Ill_GATKHC_4987:HG3_Ill_GATKHCSBGrefine_2034:HG3_Ill_GATKHC_5081:HG3_Ill_Krunchall_4185:HG4_Ill_150bpfermikitraw_4016:HG4_Ill_250bpfermikitraw_4186:HG4_Ill_GATKHCSBGrefine_2123:HG4_Ill_GATKHC_5054:HG4_Ill_Krunchall_4401;NumExactMatchSVs=12;ClusterMaxShiftDist=0.162602;ClusterMaxSizeDiff=0.146341;ClusterMaxEditDist=0.27907;PBcalls=7;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=195;REFWIDENED=3:13753246-13753440;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:36:1/1:2:22:2:10:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr3	13997553	HG2_PB_SVrefine2PB10Xhap12_2262	T	TCTCCCTCCCTTCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCTTCCTGCCCTTCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCCCCTCCTCCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCTGCCCTTCCTCCCTCCTCCCTGCCCTTCCTCCCTCCCTCCTGCCCTTCCTCCCTCCCTCCCTGCCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCTGCCCTCCCTCCCTGCCCTTCCTCCATCCCTCCCTGCCCTTCCTCCCTCCCTCCCTGACCTTCCTCCCTCCCTCCCACCCTGCCCTTCGTCCCTCCCTCCCTCCCTGACTCCCACCCTGCCCTTCCTCCCTTCCCTCCCACCCTGCCCTTCCTCCCTTCCTCCCACCCTGCCCTTCCTCCCTTCCTCCCACCCTGCCCTTCCTCCCTTCCTCCCACCCTGCCCTTCCTCCCTTCCTCCCACCCTGCCCTTCCTCCCTTCCTCCCACCCTGCCCTTCCTCCCTTCCTCCCACCCTGCCCTTCCTCCCTTCCTCCCACCCTGCCCTTCCTCCCTTCCTCCCACCCTGCCTTTCCTCCCTTCCTCCCTTCCTCCCTCCCTGCCTTCCTCCCTCCCTCCCTGCCTTCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCTCCCTGCCCTTCCTCCCTCCCTCCCACCCTGCCCTTCCTCCCTCCCTCCCTGCCCTGCCCTTCCTCCCTCCCTCCCTGCCCTCCCTCCCTCTCTCCCTCCCTTCCTCCCTGCCCTTCCTCCCTCCCTCCCTGCCCTCCATCCCTCCCTCCCTCCCACCCTGCCCTCCATGCCTCTCTCCCTCCCACCCTGCCCTCCGTCCCTCTCTCCCTCCCACCCTGCCCTCCGTCCCTCTCTCCCTCCCCTCCCACTCTGCCCTCCCTCCCTCCCACCCCTCCTTCACTCCCTCCCTCCCACCCCTCCTTCCCTCCCTCCCTCCCACCCTCCTTCCCTCCCTCCCTCCCACCCTCCTTCCCTCCCTCCCTCCCACCCCTCCTTCCCTCCCTCCCTCCCACCCCTCCTTCCCTCC	10	PASS	ClusterIDs=HG2_PB_pbsv_3081:HG2_PB_PB10Xdip_19963:HG4_PB_HySA_4633:HG2_PB_HySA_5797:HG3_PB_pbsv_3037:HG2_PB_SVrefine2Falcon2Bionano_1371:HG3_PB_assemblyticsfalcon_17179:HG2_PB_assemblyticsfalcon_17256:HG2_PB_SVrefine2Falcon1plusDovetail_7848:HG3_PB_SVrefine2Falcon1Dovetail_1905:HG4_PB_SVrefine2Falcon1Dovetail_1852:HG3_PB_SVrefine2PBcRDovetail_1531:HG2_PB_SVrefine2PB10Xhap12_2262:HG2_PB_SVrefine2PBcRplusDovetail_7278:HG4_PB_pbsv_3087;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2262;NumExactMatchSVs=1;ClusterMaxShiftDist=0.200419;ClusterMaxSizeDiff=0.200419;ClusterMaxEditDist=0.277568;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1203;DistBack=48105;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=3:13997554-13997596;PctSeqSimilarity=0.9806;PctSizeSimilarity=0.9639;PctRecOverlap=0.9632;SizeDiff=-45;StartDistance=-10;EndDistance=-10;GTMatch=1;TruScore=96;MatchId=3572.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:1:27:0:25:./.:0:0:0:0:./.:0:6:0/1:19:34:.:1135:.
chr3	14644917	HG2_Ill_Krunchall_4221	A	AATAAGTGAGTGAATGAATGAATCAGCGCATAAGTGAGTGAATACACAGGTATATGGATGAGTGC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2324:HG4_PB_HySA_4638:HG2_PB_HySA_5806:HG2_PB_pbsv_3084:HG4_Ill_svaba_3861:HG4_PB_pbsv_3090:HG4_Ill_Krunchall_4409:HG4_Ill_GATKHC_5064:HG4_Ill_GATKHCSBGrefine_2128:HG4_Ill_250bpfermikitraw_4196:HG3_Ill_svaba_3877:HG2_Ill_svaba_3775:HG2_Ill_Krunchall_4221:HG2_Ill_GATKHC_4996:HG2_Ill_GATKHCSBGrefine_2047:HG2_Ill_250bpfermikitraw_4165:HG4_PB_SVrefine2PBcRDovetail_1630:HG2_Ill_SVrefine2DISCOVARplusDovetail_8328;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4165:HG2_Ill_GATKHCSBGrefine_2047:HG2_Ill_GATKHC_4996:HG2_Ill_Krunchall_4221:HG2_Ill_svaba_3775:HG3_Ill_svaba_3877:HG4_Ill_250bpfermikitraw_4196:HG4_Ill_GATKHCSBGrefine_2128:HG4_Ill_GATKHC_5064:HG4_Ill_Krunchall_4409:HG4_Ill_svaba_3861;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0895522;ClusterMaxSizeDiff=0.0597015;ClusterMaxEditDist=0.205882;PBcalls=5;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=64;DistBack=-1;DistForward=74558;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=83;REFWIDENED=3:14644914-14644996;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3573.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:31:./.:10:27:28:2:./.:0:0:0:0:0/1:30:23:./.:.:.:.:.:.
chr3	15779029	HG2_Ill_svaba_3780	G	GAAGAAATACTGACAACTATTATTCAAAAACATTCATTTCTTATATCTTATTTTTCTAGGTAACAAGATACAATTTATACTTTGAATAAATAGTTTTTTGGTTTTGTTTTTTGGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2265:HG2_PB_SVrefine2Falcon1plusDovetail_7851:HG3_PB_pbsv_3046:HG4_PB_HySA_4647:HG2_PB_pbsv_3087:HG4_PB_SVrefine2PBcRDovetail_1634:HG2_PB_SVrefine2Falcon2Bionano_1374:HG4_Ill_svaba_3868:HG4_Ill_manta_741:HG4_Ill_MetaSV_3296:HG4_Ill_GATKHCSBGrefine_2131:HG3_Ill_svaba_3883:HG3_Ill_manta_679:HG3_Ill_Spiral_3274:HG3_Ill_MetaSV_3328:HG3_Ill_GATKHCSBGrefine_2040:HG2_Ill_svaba_3780:HG2_Ill_manta_865:HG2_Ill_SpiralSDKrefine_10797:HG2_Ill_SVrefine2DISCOVARplusDovetail_8330:HG2_Ill_MetaSV_3170:HG2_Ill_GATKHCSBGrefine_2049:HG2_10X_SVrefine210Xhap12_2327:HG2_PB_HySA_5810:HG2_Ill_breakscan11_3285:HG4_PB_pbsv_3093:HG2_PB_PB10Xdip_20022;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2327:HG2_Ill_GATKHCSBGrefine_2049:HG2_Ill_MetaSV_3170:HG2_Ill_SVrefine2DISCOVARplusDovetail_8330:HG2_Ill_SpiralSDKrefine_10797:HG2_Ill_manta_865:HG2_Ill_svaba_3780:HG3_Ill_GATKHCSBGrefine_2040:HG3_Ill_MetaSV_3328:HG3_Ill_Spiral_3274:HG3_Ill_manta_679:HG3_Ill_svaba_3883:HG4_Ill_GATKHCSBGrefine_2131:HG4_Ill_MetaSV_3296:HG4_Ill_manta_741:HG4_Ill_svaba_3868;NumExactMatchSVs=16;ClusterMaxShiftDist=0.307692;ClusterMaxSizeDiff=0.300366;ClusterMaxEditDist=0.32967;PBcalls=10;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=144;DistBack=6;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:15779030-15779030;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3575.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:0|1:19:2:1:24:./.:0:0:0:0:0/1:29:15:./.:.:.:.:.:.
chr3	15784113	HG3_PB_pbsv_3047	G	GGGGGTCAGCCCCCGCCCAGGCCAGCGCCCCGTCCGGAGGAGGTGGGATTCACCCCTGCCCAGGGCCAAGGCCGCACCCGTCCGGGGAGGGAGTGGCGGGCCGTCAGCCCCCCGCCCGGCCAGCCGCACCGTCTGGGAGGGAGTTGGGGGCGTGTCAGTCTCCCCCCGGCCAGCCGCCCCGTCCGCGGAGGTGGAGCGGCACCTCTGCCCGGCCGCCCCTACTGTGAAGTGAGGATCCCCTCTGCCGGCCCAGCCGCCCCATCCCGGAAGGAGGTGGGGGATCATGCCCCCCGCCCGGCCAGCCGCCCCATCTGGGAGGAGGTGGGGAGGCGTGAGGTGTCAGCCCCCCGCCCGGCCAGCCGCGCCGCCGTCCCAGGAGGGAGGGGTCAGGCCCCCCGCCCCGGCCAGCCGCCCCGTCTGGTGAGGTGAGGGGGCACCTCTGCCCGGCCGCCCCTACTGGAAGTGAGGAGCCCCTCTGCACCGGCCAGCCGCCCCGTACCGGGAGGTGAGGGGCGCCTCTGCCCGCGCCTCCCCTTACTGGAATGAGGAAAGGCCCTCTGCCAGGCTAGCGCCCCGTTCTGGTAGGGAGGTGGGGGGTCAGCCCCCCGCCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGCGCCTCCTGCCCTTGCCGCCCCTTACTGGGAACTGAGAGCCCTCTGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCCGGCCAAGCCGCCCCGTTCCGGGGAGGAGGTGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1856:HG3_PB_HySA_4723:HG2_PB_pbsv_3088:HG2_PB_PB10Xdip_20024:HG2_PB_PB10Xdip_20023:HG3_PB_HySA_4722:HG4_PB_pbsv_3094:HG3_PB_pbsv_3047:HG4_PB_SVrefine2PBcRDovetail_1635:HG2_PB_SVrefine2PB10Xhap12_2266:HG3_PB_SVrefine2PBcRDovetail_1533:HG2_PB_SVrefine2Falcon1plusDovetail_7852:HG2_PB_SVrefine2Falcon2Bionano_1375:HG2_PB_SVrefine2PBcRplusDovetail_7280:HG3_PB_SVrefine2Falcon1Dovetail_1908;NumClusterSVs=15;ExactMatchIDs=HG3_PB_pbsv_3047;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0796759;ClusterMaxSizeDiff=0.0739744;ClusterMaxEditDist=0.241729;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=770;DistBack=-264;DistForward=19583;DistMin=-264;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=268;REFWIDENED=3:15784089-15784356;PctSeqSimilarity=0.9408;PctSizeSimilarity=0.9766;PctRecOverlap=0.882;SizeDiff=18;StartDistance=-82;EndDistance=-82;GTMatch=0;TruScore=93;MatchId=3576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:61:1/1:1:27:2:26:./.:0:0:0:0:./.:6:1:0/1:9:23:.:.:.
chr3	17545680	HG3_Ill_SVrefine2DISCOVARDovetail_2254	T	TCAAACTGATAAAACAACACAGTTTGCTCGTTCATCATTTACTGAGCAGTGCCCATGTGCCAAGTACTAGGTATACATACATTTCCAACACAATTCCTGCCCTCATAAAGCTCACATTTGAGACCAGGAGACAAAAAATAAACAAGGAAACAAATTAATATAGATTATATATTGAGAACATCTTAATATATATATATAGAGACAATATAATCTATATTAATTTGTTTCCTTGTTTATTTTTTGTCTCCTGGTCTCAGATGTGAGCTTTATGAGGGCAGGAATTGTGTTGGAAATGTATGTATACCTAGTACTTGGCACATGGGCACTGCTCAGTAAATGATGAACGAG	20	PASS	ClusterIDs=HG4_Ill_manta_744:HG2_PB_pbsv_3099:HG4_PB_pbsv_3104:HG3_PB_pbsv_3056:HG4_PB_assemblyticsfalcon_16914:HG3_PB_assemblyticsfalcon_17206:HG2_PB_assemblyticsfalcon_17285:HG2_PB_assemblyticsPBcR_16707:HG2_PB_HySA_5820:HG2_PB_PB10Xdip_20178:HG2_PB_PB10Xdip_20177:HG4_PB_HySA_4663:HG3_PB_HySA_4730:HG4_PB_SVrefine2PBcRDovetail_1642:HG4_PB_SVrefine2Falcon1Dovetail_1862:HG4_Ill_SVrefine2DISCOVARDovetail_2272:HG3_PB_SVrefine2PBcRDovetail_1540:HG3_PB_SVrefine2Falcon1Dovetail_1915:HG3_Ill_SVrefine2DISCOVARDovetail_2254:HG3_Ill_MetaSV_3331:HG3_Ill_GATKHCSBGrefine_2052:HG2_PB_SVrefine2PBcRplusDovetail_7286:HG2_PB_SVrefine2PB10Xhap12_2279:HG2_PB_SVrefine2Falcon2Bionano_1383:HG2_PB_SVrefine2Falcon1plusDovetail_7863:HG2_Ill_SVrefine2DISCOVARplusDovetail_8337:HG2_Ill_MetaSV_3172:HG4_Ill_MetaSV_3299:HG4_Ill_GATKHCSBGrefine_2141:HG2_Ill_GATKHCSBGrefine_2058;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_MetaSV_3172:HG2_Ill_SVrefine2DISCOVARplusDovetail_8337:HG2_PB_SVrefine2Falcon1plusDovetail_7863:HG2_PB_SVrefine2Falcon2Bionano_1383:HG2_PB_SVrefine2PB10Xhap12_2279:HG2_PB_SVrefine2PBcRplusDovetail_7286:HG3_Ill_GATKHCSBGrefine_2052:HG3_Ill_MetaSV_3331:HG3_Ill_SVrefine2DISCOVARDovetail_2254:HG3_PB_SVrefine2Falcon1Dovetail_1915:HG3_PB_SVrefine2PBcRDovetail_1540:HG4_Ill_SVrefine2DISCOVARDovetail_2272:HG4_PB_SVrefine2Falcon1Dovetail_1862:HG4_PB_SVrefine2PBcRDovetail_1642;NumExactMatchSVs=14;ClusterMaxShiftDist=0.120172;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.251788;PBcalls=20;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=347;DistBack=32517;DistForward=57517;DistMin=32517;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=3:17545681-17545687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3577.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:85:1/1:1:22:0:18:./.:0:0:0:0:1/1:0:29:1/1:3:50:.:.:.
chr3	18821509	HG4_PB_SVrefine2Falcon1Dovetail_1866	A	ATATATATATATGTAATATATATACATAAAGTATACATATATGTAATATATATACATAAAGTATACATATATGTAATATATATACATAAAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2336:HG2_Ill_SpiralSDKrefine_10815:HG4_PB_SVrefine2PBcRDovetail_1647:HG4_PB_HySA_4666:HG3_PB_pbsv_3063:HG3_PB_SVrefine2Falcon1Dovetail_1918:HG3_Ill_Spiral_3294:HG4_PB_SVrefine2Falcon1Dovetail_1866:HG4_Ill_svaba_3893:HG4_Ill_manta_747:HG4_Ill_Krunchall_4440:HG4_Ill_250bpfermikitraw_4225:HG4_Ill_150bpfermikitraw_4049:HG3_PB_SVrefine2PBcRDovetail_1543:HG3_Ill_svaba_3913:HG3_Ill_manta_684:HG3_Ill_SVrefine2DISCOVARDovetail_2261:HG3_Ill_Krunchall_4221:HG3_Ill_250bpfermikitraw_4106:HG3_Ill_150bpfermikitraw_3966:HG2_Ill_svaba_3799:HG2_Ill_manta_871:HG2_Ill_Krunchall_4245:HG2_Ill_250bpfermikitraw_4186:HG2_Ill_150bpfermikitraw_3873;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2336:HG4_PB_SVrefine2PBcRDovetail_1647:HG4_PB_SVrefine2Falcon1Dovetail_1866:HG4_Ill_svaba_3893:HG4_Ill_manta_747:HG4_Ill_Krunchall_4440:HG4_Ill_250bpfermikitraw_4225:HG4_Ill_150bpfermikitraw_4049:HG3_PB_SVrefine2PBcRDovetail_1543:HG3_Ill_svaba_3913:HG3_Ill_manta_684:HG3_Ill_SVrefine2DISCOVARDovetail_2261:HG3_Ill_Krunchall_4221:HG3_Ill_250bpfermikitraw_4106:HG3_Ill_150bpfermikitraw_3966:HG2_Ill_svaba_3799:HG2_Ill_manta_871:HG2_Ill_Krunchall_4245:HG2_Ill_250bpfermikitraw_4186:HG2_Ill_150bpfermikitraw_3873;NumExactMatchSVs=20;ClusterMaxShiftDist=0.211765;ClusterMaxSizeDiff=0.211765;ClusterMaxEditDist=0.315789;PBcalls=6;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=90;DistBack=8;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=3:18821510-18821552;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3578.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:32:0|1:20:3:3:27:./.:0:0:0:0:0/1:22:21:./.:.:.:.:.:.
chr3	19035438	HG3_PB_assemblyticsfalcon_17220	TAAAACCAAGGTC	ATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3287:HG3_PB_pbsv_3066:HG2_PB_pbsv_3108:HG2_PB_HySA_5834:HG2_PB_assemblyticsfalcon_17297:HG4_PB_assemblyticsfalcon_16930:HG3_PB_assemblyticsfalcon_17220:HG4_PB_HySA_4668:HG4_PB_pbsv_3112:HG2_PB_SVrefine2Falcon1plusDovetail_7867:HG4_PB_SVrefine2PBcRDovetail_1648:HG4_PB_SVrefine2Falcon1Dovetail_1869:HG3_PB_SVrefine2Falcon1Dovetail_1922:HG3_Ill_GATKHCSBGrefine_2059:HG3_PB_HySA_4745;NumClusterSVs=15;ExactMatchIDs=HG3_PB_assemblyticsfalcon_17220:HG4_PB_assemblyticsfalcon_16930;NumExactMatchSVs=2;ClusterMaxShiftDist=0.169492;ClusterMaxSizeDiff=0.163328;ClusterMaxEditDist=0.234206;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=148448;DistForward=10758;DistMin=10758;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:19035451-19035437;PctSeqSimilarity=0.9772;PctSizeSimilarity=0.9224;PctRecOverlap=0.9582;SizeDiff=-26;StartDistance=0;EndDistance=12;GTMatch=0;TruScore=95;MatchId=3579.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:0|1:23:2:1:23:./.:0:0:0:0:0/1:29:6:0/1:12:23:.:.:.
chr3	20484405	HG3_Ill_svaba_3931	T	TTTCAATTGCTGCTGAAAGAGCATTTTATCAATTTTAGCATCCCCTATCATAAAGGGATGCTAAAATTGATAAAATGCTCTTTCAGCAGCA	20	PASS	ClusterIDs=HG2_PB_HySA_5844:HG3_PB_pbsv_3075:HG4_PB_pbsv_3118:HG2_PB_pbsv_3113:HG2_PB_assemblyticsfalcon_17307:HG4_PB_assemblyticsfalcon_16942:HG3_PB_assemblyticsfalcon_17237:HG2_PB_assemblyticsPBcR_16724:HG4_PB_SVrefine2PBcRDovetail_1651:HG4_PB_SVrefine2Falcon1Dovetail_1875:HG4_Ill_SVrefine2DISCOVARDovetail_2286:HG3_PB_SVrefine2PBcRDovetail_1550:HG3_PB_SVrefine2Falcon1Dovetail_1928:HG3_Ill_SVrefine2DISCOVARDovetail_2272:HG2_PB_SVrefine2PBcRplusDovetail_7292:HG2_PB_SVrefine2PB10Xhap12_2290:HG2_PB_SVrefine2Falcon2Bionano_1389:HG2_Ill_SVrefine2DISCOVARplusDovetail_8348:HG2_PB_SVrefine2Falcon1plusDovetail_7873:HG3_Ill_Spiral_3311:HG2_Ill_SpiralSDKrefine_10826:HG4_Ill_svaba_3910:HG4_Ill_manta_749:HG4_Ill_Krunchall_4452:HG4_Ill_GATKHCSBGrefine_2151:HG3_Ill_svaba_3931:HG3_Ill_manta_686:HG3_Ill_GATKHC_5145:HG3_Ill_GATKHCSBGrefine_2062:HG2_Ill_svaba_3815:HG2_Ill_manta_873:HG2_Ill_Krunchall_4257:HG2_Ill_GATKHCSBGrefine_2067:HG2_PB_PB10Xdip_20600:HG2_PB_PB10Xdip_20599:HG3_PB_HySA_4759;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2067:HG2_Ill_Krunchall_4257:HG2_Ill_manta_873:HG2_Ill_svaba_3815:HG3_Ill_GATKHCSBGrefine_2062:HG3_Ill_GATKHC_5145:HG3_Ill_manta_686:HG3_Ill_svaba_3931:HG4_Ill_GATKHCSBGrefine_2151:HG4_Ill_Krunchall_4452:HG4_Ill_manta_749:HG4_Ill_svaba_3910;NumExactMatchSVs=12;ClusterMaxShiftDist=0.119565;ClusterMaxSizeDiff=0.0972973;ClusterMaxEditDist=0.265957;PBcalls=19;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=90;DistBack=3128;DistForward=1103;DistMin=1103;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:20484406-20484405;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3581.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:1/1:1:22:1:21:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr3	25278448	HG2_PB_HySA_5874	T	TATCCTGTTTCTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGCTCACTGCAAGCTCCGCCTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCGCCACTACGCCGGCTAATTTTTGTATTTTCAGTAGAGACGGGTTTCACCGTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCGCCCGACTCGGCCTCCAAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3289:HG4_PB_pbsv_3134:HG2_PB_pbsv_3125:HG2_PB_HySA_5874:HG2_PB_SVrefine2Falcon2Bionano_1398:HG2_PB_SVrefine2Falcon1plusDovetail_7880;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_5874;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0763359;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.165436;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=-11;DistForward=3104;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:25278449-25278448;PctSeqSimilarity=0.9767;PctSizeSimilarity=0.9662;PctRecOverlap=0.9692;SizeDiff=-11;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=97;MatchId=3582.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:36:./.:10:17:15:8:./.:0:0:0:0:0/1:33:14:0/1:6:15:.:.:.
chr3	25291341	HG3_Ill_Krunchall_4269	A	AGCAGGCTGTGTGTTCCTGTTTTGGGGCCCCAGGGCGGCATATGCTTGCAGCAGTATTGCCAGGTCCAGTTGG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3919:HG3_PB_pbsv_3089:HG3_PB_HySA_4789:HG2_PB_pbsv_3126:HG2_PB_PB10Xdip_20629:HG4_PB_pbsv_3135:HG2_PB_PB10Xdip_20628:HG4_PB_HySA_4700:HG2_PB_HySA_5875:HG4_PB_SVrefine2Falcon1Dovetail_1882:HG4_Ill_svaba_3940:HG4_Ill_GATKHC_5147:HG4_Ill_GATKHCSBGrefine_2166:HG4_Ill_250bpfermikitraw_4269:HG4_Ill_150bpfermikitraw_4089:HG3_PB_SVrefine2Falcon1Dovetail_1941:HG3_Ill_svaba_3963:HG3_Ill_Krunchall_4269:HG3_Ill_GATKHC_5178:HG3_Ill_GATKHCSBGrefine_2076:HG3_Ill_250bpfermikitraw_4146:HG2_PB_SVrefine2PBcRplusDovetail_7300:HG2_PB_SVrefine2PB10Xhap12_2301:HG2_PB_SVrefine2Falcon2Bionano_1399:HG2_PB_SVrefine2Falcon1plusDovetail_7881:HG2_Ill_svaba_3843:HG2_Ill_manta_880:HG2_Ill_SVrefine2DISCOVARplusDovetail_8359:HG2_Ill_Krunchall_4290:HG2_Ill_GATKHC_5072:HG2_Ill_GATKHCSBGrefine_2080:HG2_Ill_250bpfermikitraw_4228;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3919:HG4_PB_SVrefine2Falcon1Dovetail_1882:HG4_Ill_svaba_3940:HG4_Ill_GATKHC_5147:HG4_Ill_GATKHCSBGrefine_2166:HG4_Ill_250bpfermikitraw_4269:HG4_Ill_150bpfermikitraw_4089:HG3_PB_SVrefine2Falcon1Dovetail_1941:HG3_Ill_svaba_3963:HG3_Ill_Krunchall_4269:HG3_Ill_GATKHC_5178:HG3_Ill_GATKHCSBGrefine_2076:HG3_Ill_250bpfermikitraw_4146:HG2_PB_SVrefine2PBcRplusDovetail_7300:HG2_PB_SVrefine2PB10Xhap12_2301:HG2_PB_SVrefine2Falcon2Bionano_1399:HG2_PB_SVrefine2Falcon1plusDovetail_7881:HG2_Ill_svaba_3843:HG2_Ill_manta_880:HG2_Ill_SVrefine2DISCOVARplusDovetail_8359:HG2_Ill_Krunchall_4290:HG2_Ill_GATKHC_5072:HG2_Ill_GATKHCSBGrefine_2080:HG2_Ill_250bpfermikitraw_4228;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0933333;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.261438;PBcalls=14;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=72;DistBack=-72;DistForward=43746;DistMin=-72;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=74;REFWIDENED=3:25291342-25291415;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3583.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:49:./.:7:20:2:13:./.:0:0:0:0:1/1:0:21:./.:.:.:.:.:.
chr3	26248696	HG2_PB_HySA_5883	T	TAAGTATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCCGATCTCCGCTCACTGCAAGCTCCGCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCACCGAGTAGCTGGACTACAGGCGCGCCCGCCACTGCGCCGGCTAATTTTTTGTATTTTTTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACTCGTGATCCGCCCGCCTCGGCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTAGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3290:HG2_PB_HySA_5884:HG2_PB_assemblyticsfalcon_17345:HG4_PB_HySA_4706:HG4_PB_SVrefine2PBcRDovetail_1660:HG2_PB_pbsv_3128:HG2_PB_HySA_5883:HG4_PB_pbsv_3137:HG4_PB_assemblyticsfalcon_16976:HG2_PB_SVrefine2Falcon2Bionano_1401:HG2_PB_SVrefine2Falcon1plusDovetail_7882:HG2_Ill_MetaSV_3183:HG4_PB_SVrefine2Falcon1Dovetail_1885:HG2_PB_HySA_5882;NumClusterSVs=14;ExactMatchIDs=HG2_PB_HySA_5883;NumExactMatchSVs=1;ClusterMaxShiftDist=0.263514;ClusterMaxSizeDiff=0.263514;ClusterMaxEditDist=0.273649;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=71366;DistForward=29591;DistMin=29591;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=3:26248692-26248703;PctSeqSimilarity=0.9814;PctSizeSimilarity=1;PctRecOverlap=0.9842;SizeDiff=0;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=98;MatchId=3584.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:29:0|1:27:2:0:19:./.:0:0:0:0:0/1:30:13:0/1:5:16:.:.:.
chr3	27530567	HG4_Ill_SVrefine2DISCOVARDovetail_2315	C	CTGAGTCCTAGGAATCTCAATGAAAGAAATGGAATGAATTCCACTGAGGGTGGGAGGGGATAAGGCTGCCCTCTGTGGGAGAAAGGTGAATATGAAGATGTTTGGAAAAGCCACAGAGAAATGTAGTAGATTTAAACTGATTCATGATGGTATACGTGGTATAATATAAAACATATTTGGTTTTTGTCCTAGATTCCTATTATAGCACTCCTAAAACCTTTAGAATTTCCTGAGTGATAGCAATGTCTTTTGTTATTCAAAACAAGACACTTTCATAACTTCTGAGTCTATGCTAACTAAGTGGTTACCTACAATGGGACCACTAGATAGTCCAGTCACCAGAAATGGGGTCACTCACCAGAAACACCAATTGATTAGAGGATTAGAGGCTTGGAATTTTCAGCCCAGCTACCAACCTTTGGGAAGGAAGAGGGAGACGGGATTAAATGCTATAAAAACTCTTGAATAACAAGATTTGATGAACTTTCTGGTTACTGAACATGTGAAGGTGGCTGGAGAGGGCAGGAGAGCTCCGCATGCCCCCATAACTTGCCTTTTCCATCACCTCATCTAGCTGTACATCTCTATCTTTTGTAATATTCTTTCTAGTAAAACAGTAAATGTGTTTCTCTGAGTTATGTGAGGCATCTCCACAAATTATTGATGAGAACTCTGGTTTGTAGCTGGTCAGTCAGAAGTACAGGTGACAACCTACTACTTGTGATTGGCATCTGAAGTCGGGGTTATCTTGTGGGCCTGAGCCCTCAACAAATGGGATCTGACACTATCTCCTGGTAGGAAGCATCAGAATTGAAGTTAATTATAGGACACCCAGTTGGTATCCACCGGAGATTGCTTGGTGTGTGAGAGTAGAAAGAAAAAATTGTTTTTCCAACCAGGTGTGGTAGCTCACGCCTGTCATCCAGTGCTTTGGGAAGCTGAGGCAGGAGGATCACTTGAGTTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCACCTATAGTCCCAGCTATTCAGGAGGCTGAGACAAGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGCATGGGAGAGGGAGTGAGACTCTATCTCAAAAAAAGAAAAAAAAATTTTTTTCCTTTTATAGTATTACATCATCAAATAAATGAGGGGGAGTGGGAGAAGGGCATTACAGATAGCGGTAACAGCAACAGAAAGATCAGCAACATTGATCTGAATCAGGGTTGCTCAGTGGTGAAGCCTGCCTGCTCTTGGGGCAGACTACCCCGGCCGATTCTCCTTGTGTTAGTTGTGTCTTTAGGCAAGTTACCTCATCTTGTCAGCCTCTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCGACTCACTGCAACTTTTGACACCCAGGTTCAAGCGATTCTCGTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGTGCACCACCATGCCCAGCTAATTTGTATTTTTAGTATAAACAGGGTTTCACCATTATGGCCAGGCAGGTCTCCAACTCCTAATAAGTTATCCACCTGCTTCAGCCTCCCAAAGTGCTGGGATTACACACTGAGGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7884:HG4_PB_pbsv_3142:HG2_PB_pbsv_3132:HG2_Ill_breakscan11_3291:HG3_PB_HySA_4802:HG4_PB_HySA_4714:HG2_PB_PB10Xdip_20639:HG2_PB_SVrefine2PB10Xhap12_2305:HG4_PB_assemblyticsfalcon_16984:HG2_PB_assemblyticsfalcon_17349:HG3_PB_SVrefine2PBcRDovetail_1560:HG2_10X_SVrefine210Xhap12_2360:HG4_PB_SVrefine2PBcRDovetail_1663:HG4_Ill_SVrefine2DISCOVARDovetail_2315:HG2_Ill_SVrefine2DISCOVARplusDovetail_8368:HG4_PB_SVrefine2Falcon1Dovetail_1890:HG2_PB_SVrefine2Falcon2Bionano_1404;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8368:HG4_Ill_SVrefine2DISCOVARDovetail_2315:HG4_PB_SVrefine2PBcRDovetail_1663;NumExactMatchSVs=3;ClusterMaxShiftDist=0.184946;ClusterMaxSizeDiff=0.184946;ClusterMaxEditDist=0.232258;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=1682;DistBack=100162;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=3:27530568-27530574;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=0.9964;SizeDiff=1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=3585.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:34:0|1:34:2:1:26:./.:0:0:0:0:0/1:13:12:0/1:47:122:.:.:.
chr3	27899259	HG3_Ill_GATKHCSBGrefine_2082	C	CAAGATGGATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGGCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7303:HG3_PB_pbsv_3099:HG2_PB_SVrefine2PB10Xhap12_2306:HG2_PB_PB10Xdip_20640:HG2_PB_pbsv_3133:HG4_PB_HySA_4716:HG4_PB_pbsv_3143:HG2_PB_assemblyticsfalcon_17351:HG3_PB_assemblyticsfalcon_17293:HG4_PB_assemblyticsfalcon_16985:HG2_PB_assemblyticsPBcR_16763:HG2_PB_HySA_5889:HG4_PB_HySA_4715:HG4_PB_SVrefine2PBcRDovetail_1664:HG4_Ill_MetaSV_3315:HG4_Ill_GATKHCSBGrefine_2170:HG3_Ill_MetaSV_3344:HG3_Ill_GATKHCSBGrefine_2082:HG2_Ill_MetaSV_3185:HG2_Ill_GATKHCSBGrefine_2084:HG2_PB_SVrefine2Falcon1plusDovetail_7885:HG3_PB_SVrefine2Falcon1Dovetail_1949:HG4_PB_SVrefine2Falcon1Dovetail_1891;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2084:HG2_Ill_MetaSV_3185:HG3_Ill_GATKHCSBGrefine_2082:HG3_Ill_MetaSV_3344:HG4_Ill_GATKHCSBGrefine_2170:HG4_Ill_MetaSV_3315;NumExactMatchSVs=6;ClusterMaxShiftDist=0.185124;ClusterMaxSizeDiff=0.185124;ClusterMaxEditDist=0.234114;PBcalls=17;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=11286;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=3:27899260-27899269;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3586.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:0|1:28:0:0:26:./.:0:0:0:0:0/1:27:12:0/1:13:26:.:.:.
chr3	28280421	HG2_Ill_scalpel_3031	C	CTTTTATATATTTTATATATAAAAATATAATAAAATATAATATAATATTTTATTATAT	20	PASS	ClusterIDs=HG2_Ill_svaba_3867:HG3_PB_pbsv_3101:HG2_PB_pbsv_3136:HG3_PB_HySA_4809:HG2_PB_PB10Xdip_20642:HG2_Ill_breakscan11_3292:HG4_PB_pbsv_3145:HG2_PB_HySA_5894:HG4_PB_SVrefine2PBcRDovetail_1666:HG4_PB_SVrefine2Falcon1Dovetail_1894:HG4_Ill_svaba_3966:HG4_Ill_scalpel_2947:HG4_Ill_manta_759:HG4_Ill_SVrefine2DISCOVARDovetail_2318:HG4_Ill_Krunchall_4509:HG4_Ill_GATKHC_5168:HG4_Ill_GATKHCSBGrefine_2172:HG4_Ill_Cortex_2314:HG4_Ill_250bpfermikitraw_4290:HG4_Ill_150bpfermikitraw_4110:HG3_PB_SVrefine2PBcRDovetail_1561:HG3_PB_SVrefine2Falcon1Dovetail_1950:HG3_Ill_svaba_3991:HG3_Ill_scalpel_3159:HG3_Ill_manta_696:HG3_Ill_Spiral_3356:HG3_Ill_SVrefine2DISCOVARDovetail_2314:HG3_Ill_Krunchall_4291:HG3_Ill_GATKHC_5198:HG3_Ill_GATKHCSBGrefine_2083:HG3_Ill_Cortex_2350:HG3_Ill_250bpfermikitraw_4169:HG3_Ill_150bpfermikitraw_4034:HG2_PB_SVrefine2PBcRplusDovetail_7305:HG2_PB_SVrefine2PB10Xhap12_2308:HG2_PB_SVrefine2Falcon2Bionano_1407:HG2_PB_SVrefine2Falcon1plusDovetail_7887:HG2_Ill_svaba_3868:HG2_Ill_scalpel_3031:HG2_Ill_manta_884:HG2_Ill_SpiralSDKrefine_10865:HG2_Ill_SVrefine2DISCOVARplusDovetail_8374:HG2_Ill_Krunchall_4312:HG2_Ill_GATKHC_5091:HG2_Ill_GATKHCSBGrefine_2086:HG2_Ill_Cortex_5494:HG2_Ill_250bpfermikitraw_4247:HG2_Ill_150bpfermikitraw_3935:HG2_10X_SVrefine210Xhap12_2363:HG4_Ill_svaba_3965:HG3_Ill_svaba_3990;NumClusterSVs=51;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2363:HG2_Ill_150bpfermikitraw_3935:HG2_Ill_250bpfermikitraw_4247:HG2_Ill_Cortex_5494:HG2_Ill_GATKHCSBGrefine_2086:HG2_Ill_GATKHC_5091:HG2_Ill_Krunchall_4312:HG2_Ill_SVrefine2DISCOVARplusDovetail_8374:HG2_Ill_SpiralSDKrefine_10865:HG2_Ill_manta_884:HG2_Ill_scalpel_3031:HG2_Ill_svaba_3868:HG2_PB_SVrefine2Falcon1plusDovetail_7887:HG2_PB_SVrefine2Falcon2Bionano_1407:HG2_PB_SVrefine2PB10Xhap12_2308:HG2_PB_SVrefine2PBcRplusDovetail_7305:HG3_Ill_150bpfermikitraw_4034:HG3_Ill_250bpfermikitraw_4169:HG3_Ill_Cortex_2350:HG3_Ill_GATKHCSBGrefine_2083:HG3_Ill_GATKHC_5198:HG3_Ill_Krunchall_4291:HG3_Ill_SVrefine2DISCOVARDovetail_2314:HG3_Ill_Spiral_3356:HG3_Ill_manta_696:HG3_Ill_scalpel_3159:HG3_Ill_svaba_3991:HG3_PB_SVrefine2Falcon1Dovetail_1950:HG3_PB_SVrefine2PBcRDovetail_1561:HG4_Ill_150bpfermikitraw_4110:HG4_Ill_250bpfermikitraw_4290:HG4_Ill_Cortex_2314:HG4_Ill_GATKHCSBGrefine_2172:HG4_Ill_GATKHC_5168:HG4_Ill_Krunchall_4509:HG4_Ill_SVrefine2DISCOVARDovetail_2318:HG4_Ill_manta_759:HG4_Ill_scalpel_2947:HG4_Ill_svaba_3966:HG4_PB_SVrefine2Falcon1Dovetail_1894:HG4_PB_SVrefine2PBcRDovetail_1666;NumExactMatchSVs=41;ClusterMaxShiftDist=0.101695;ClusterMaxSizeDiff=0.0840336;ClusterMaxEditDist=0.218487;PBcalls=14;Illcalls=36;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=32;TenXexactcalls=1;CGexactcalls=0;HG2count=21;HG3count=16;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=57;DistBack=112662;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=3:28280422-28280431;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:64:1/1:2:20:2:36:./.:0:0:0:0:0/1:8:51:./.:.:.:.:.:.
chr3	28707044	HG2_PB_SVrefine2Falcon2Bionano_1408	T	TAAAAGCCCCAGAGACGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_GATKHCSBGrefine_2084:HG2_PB_pbsv_3137:HG2_PB_HySA_5897:HG3_PB_pbsv_3102:HG4_PB_pbsv_3146:HG2_PB_assemblyticsfalcon_17358:HG4_PB_assemblyticsfalcon_16992:HG3_PB_assemblyticsfalcon_17298:HG4_PB_HySA_4721:HG3_Ill_SVrefine2DISCOVARDovetail_2315:HG3_Ill_MetaSV_3346:HG3_PB_SVrefine2PBcRDovetail_1562:HG2_PB_SVrefine2Falcon2Bionano_1408:HG2_PB_SVrefine2Falcon1plusDovetail_7888:HG3_PB_SVrefine2Falcon1Dovetail_1951;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7888:HG2_PB_SVrefine2Falcon2Bionano_1408:HG3_PB_SVrefine2PBcRDovetail_1562;NumExactMatchSVs=3;ClusterMaxShiftDist=0.294807;ClusterMaxSizeDiff=0.294807;ClusterMaxEditDist=0.394184;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=275;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:28707045-28707058;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3588.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:48:44:./.:13:24:30:4:./.:0:0:0:0:0/1:36:5:./.:.:.:.:.:.
chr3	29222188	HG2_PB_pbsv_3139	A	AGGCCGGCCGCGGTGCTCACCCTGGAATCCCAGCACTTTGGGAGGCGAGGCGGCGGAATACACGAGGTCAGGAATCGAGACATCCCGGCTAAAACGTGGGGGGGGGGGGGGGAAAAAAAACCCCCGTCTCTAAACTAAAAGATACAAAAAATTAGCCGGGCGTATGGCGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGGCAGGATATGGCGTGACCGGGTAGGCGTGGAGCTAGGTGAGCCCAGTCCCGCCACTGCACTCGCCTGGGCGACAAGCGAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACAGCAACC	20	PASS	ClusterIDs=HG4_PB_pbsv_3149:HG3_PB_assemblyticsfalcon_17301:HG4_PB_assemblyticsfalcon_16993:HG2_PB_HySA_5900:HG2_PB_pbsv_3139:HG2_PB_assemblyticsfalcon_17359:HG2_PB_SVrefine2Falcon1plusDovetail_7889:HG2_PB_assemblyticsPBcR_16771:HG2_PB_SVrefine2PBcRplusDovetail_7306:HG2_Ill_breakscan11_3293:HG2_PB_SVrefine2PB10Xhap12_2310:HG3_PB_SVrefine2Falcon1Dovetail_1955:HG4_PB_SVrefine2Falcon1Dovetail_1895:HG2_PB_SVrefine2Falcon2Bionano_1409;NumClusterSVs=14;ExactMatchIDs=HG2_PB_pbsv_3139;NumExactMatchSVs=1;ClusterMaxShiftDist=0.197143;ClusterMaxSizeDiff=0.197143;ClusterMaxEditDist=0.279133;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=356;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:29222189-29222188;PctSeqSimilarity=0.9162;PctSizeSimilarity=0.9888;PctRecOverlap=0.9524;SizeDiff=4;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=95;MatchId=3589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:41:./.:13:12:16:17:./.:0:0:0:0:0/1:21:5:0/1:12:10:.:.:.
chr3	29755665	HG2_Ill_MetaSV_3188	C	CAAATATCCTATACTTCTGAAGCTTGTCCCTTCATGAGGAAGAAAGTCAACAAAATAAGAAAATTATATAGTAAGCCATATAGTACCACATTATTCTGGAGAAAGTTAAAGCATGTCAAGGGGGTAAGATAAAGGTGTATGTGTACAAAAGTGGTGAGGGGTGCCCTCTTTGAGAAGGTAATGTTTTTCAAAGATTTTTTTCAATGATCTGAGCAAGAGAGCTATGTGGTTTCCTGGAGAAATATGACTCTAAGCAGAGGGAACATCAGATGCAGAAACCCTGAGGCAGAAACAGGCCTGGGGTGTTTGACGAACAGTAAGGAAACCTCAGTGGCTGGAGTAAAATAAGCCAGGGGAAATTAATAGGAGATGAGGTCAAGGAGGAAGCAGAGTAGGGCAGAGTCTTGCAAATTATTTTACGGACTTCTGTTTTCATTCTGAGTGAGGTGGAAAGGCACTGTAGATTTTATGCAAAACAGTGATAGGATAAAATTTACAGTTTCAAAAGAATTATTCAATTTGCTGTGCTGAGACGGCACCATCAGTGGGCAAAGGTGGAAGCAGGGAGACCAGTCAGGAGGCTATGGT	20	PASS	ClusterIDs=HG3_PB_pbsv_3109:HG2_PB_pbsv_3142:HG2_PB_PB10Xdip_20649:HG2_PB_SVrefine2PB10Xhap12_2313:HG4_PB_assemblyticsfalcon_16995:HG4_PB_pbsv_3150:HG3_PB_assemblyticsfalcon_17304:HG2_PB_assemblyticsPBcR_16774:HG2_PB_assemblyticsfalcon_17361:HG3_PB_HySA_4818:HG4_PB_HySA_4725:HG3_PB_SVrefine2Falcon1Dovetail_1957:HG2_PB_SVrefine2PBcRplusDovetail_7308:HG4_PB_SVrefine2Falcon1Dovetail_1896:HG4_Ill_MetaSV_3318:HG4_Ill_GATKHCSBGrefine_2174:HG4_Ill_Cortex_2318:HG3_Ill_MetaSV_3350:HG3_Ill_GATKHCSBGrefine_2087:HG3_Ill_Cortex_2353:HG2_PB_SVrefine2Falcon1plusDovetail_7891:HG2_Ill_SVrefine2DISCOVARplusDovetail_8381:HG2_Ill_MetaSV_3188:HG2_Ill_GATKHCSBGrefine_2087:HG2_Ill_Cortex_5498:HG2_10X_SVrefine210Xhap12_2366:HG2_Ill_breakscan11_3294;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2366:HG2_Ill_Cortex_5498:HG2_Ill_GATKHCSBGrefine_2087:HG2_Ill_MetaSV_3188:HG2_Ill_SVrefine2DISCOVARplusDovetail_8381:HG2_PB_SVrefine2Falcon1plusDovetail_7891:HG3_Ill_Cortex_2353:HG3_Ill_GATKHCSBGrefine_2087:HG3_Ill_MetaSV_3350:HG4_Ill_Cortex_2318:HG4_Ill_GATKHCSBGrefine_2174:HG4_Ill_MetaSV_3318;NumExactMatchSVs=12;ClusterMaxShiftDist=0.156863;ClusterMaxSizeDiff=0.156863;ClusterMaxEditDist=0.228474;PBcalls=15;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=587;DistBack=22226;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:29755666-29755667;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3590.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:62:0|1:38:3:1:44:./.:0:0:0:0:0/1:31:9:0/1:12:39:.:.:.
chr3	31400672	HG2_PB_pbsv_3143	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGAGTCTCCGCTCTGTCGCCCGAGCTGGAGTGCGTGGCGGGATGCTCGGCTCACTGCAAGCTCGCCTCCCGGGTTCACGCCATTCTCCTGCTCAGCCTCCCAAGTAGCTAGGACTTACAGGCGGCCCGCCACTACGCCCGGCTATTTTTTGTAGTTTTTTAGTAAGAGACGGGGTTTCAACCGTTTTAGCCGGGATGGTCCGATCTCTGATCCTTGGATCCGCCCGCCTCGGCCTGCCAAAGTGGTGGGATTACGGCGTGACACACTGCGCCCGCCTGTAATTAATTTTT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3295:HG2_PB_pbsv_3143:HG4_PB_pbsv_3153:HG2_PB_assemblyticsfalcon_17374:HG4_PB_HySA_4738:HG2_PB_SVrefine2Falcon2Bionano_1410:HG2_PB_SVrefine2Falcon1plusDovetail_7892:HG2_PB_HySA_5915;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_3143;NumExactMatchSVs=1;ClusterMaxShiftDist=0.130106;ClusterMaxSizeDiff=0.130106;ClusterMaxEditDist=0.176991;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=331;DistBack=46871;DistForward=61;DistMin=61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:31400673-31400672;PctSeqSimilarity=0.9613;PctSizeSimilarity=0.994;PctRecOverlap=0.9489;SizeDiff=-2;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=96;MatchId=3591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:50:40:0|1:46:2:2:30:./.:0:0:0:0:0/1:31:5:0/1:7:14:.:.:.
chr3	31881382	HG2_Ill_MetaSV_3189	T	TAGAAGAATGGGTTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_4833:HG3_PB_pbsv_3113:HG2_PB_HySA_5921:HG2_PB_pbsv_3146:HG4_Ill_MetaSV_3320:HG3_PB_assemblyticsfalcon_17318:HG4_PB_assemblyticsfalcon_17008:HG2_PB_assemblyticsfalcon_17380:HG4_PB_HySA_4742:HG2_Ill_breakscan11_3296:HG3_Ill_MetaSV_3351:HG3_PB_SVrefine2Falcon1Dovetail_1958:HG3_Ill_GATKHCSBGrefine_2093:HG2_Ill_MetaSV_3189:HG4_PB_SVrefine2Falcon1Dovetail_1898:HG4_Ill_GATKHCSBGrefine_2181:HG2_PB_SVrefine2Falcon1plusDovetail_7893;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_3189:HG3_Ill_GATKHCSBGrefine_2093;NumExactMatchSVs=2;ClusterMaxShiftDist=0.169184;ClusterMaxSizeDiff=0.166163;ClusterMaxEditDist=0.236152;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=328;DistBack=2511;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:31881383-31881398;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:27:0|1:32:1:0:20:./.:0:0:0:0:0/1:19:8:0/1:5:39:.:.:.
chr3	31899281	HG3_PB_SVrefine2Falcon1Dovetail_1959	G	GAGAGACAAGGAGGTGGGGGAGAGGGGGGAGAGACGAGGAGGTGGGGGAGGGGGGGGAGGGGGGGAGAGGGAGGAAGGGGTTAGGGGAAGAGGGAGAGGAGAGAGAGGGAGTAAAGGGGAGGGGGAGAGAGAGACGGGGGGAGAGAGAGGGAGAAAAGGAGAGGGGGAGAGAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7309:HG2_PB_pbsv_3147:HG2_PB_HySA_5923:HG4_PB_assemblyticsfalcon_17009:HG2_PB_SVrefine2PB10Xhap12_2314:HG2_PB_HySA_5922:HG2_PB_SVrefine2Falcon1plusDovetail_7894:HG2_10X_SVrefine210Xhap12_2369:HG4_PB_SVrefine2Falcon1Dovetail_1899:HG4_PB_HySA_4743:HG3_PB_assemblyticsfalcon_17319:HG3_PB_SVrefine2Falcon1Dovetail_1959:HG2_PB_PB10Xdip_20650:HG3_PB_HySA_4834:HG4_PB_pbsv_3157:HG2_PB_SVrefine2Falcon2Bionano_1411:HG3_PB_pbsv_3114:HG2_10X_SVrefine210Xhap12_2368:HG2_PB_assemblyticsPBcR_16793;NumClusterSVs=19;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1959:HG3_PB_assemblyticsfalcon_17319;NumExactMatchSVs=2;ClusterMaxShiftDist=0.258258;ClusterMaxSizeDiff=0.258258;ClusterMaxEditDist=0.344411;PBcalls=17;Illcalls=0;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=173;DistBack=-420;DistForward=13597;DistMin=-420;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:31899282-31899281;PctSeqSimilarity=0.9858;PctSizeSimilarity=0.9719;PctRecOverlap=0.9665;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3593.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:2:23:0:30:./.:0:0:0:0:1/1:0:12:./.:.:.:.:.:.
chr3	32438789	HG4_PB_assemblyticsfalcon_17015	CCTATGTGATTAT	TATTATTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCGCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3297:HG2_PB_pbsv_3154:HG4_PB_assemblyticsfalcon_17015:HG4_PB_HySA_4746:HG2_PB_SVrefine2Falcon2Bionano_1418:HG4_PB_pbsv_3164:HG4_PB_SVrefine2Falcon1Dovetail_1905:HG2_Ill_GATKHCSBGrefine_2097;NumClusterSVs=8;ExactMatchIDs=HG4_PB_assemblyticsfalcon_17015;NumExactMatchSVs=1;ClusterMaxShiftDist=0.156863;ClusterMaxSizeDiff=0.156863;ClusterMaxEditDist=0.172549;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=228;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:32438802-32438788;PctSeqSimilarity=0.9472;PctSizeSimilarity=0.8941;PctRecOverlap=0.9451;SizeDiff=-27;StartDistance=1;EndDistance=13;GTMatch=0;TruScore=92;MatchId=3595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:17:./.:22:1:5:11:./.:0:0:0:0:0/1:34:11:./.:.:.:.:.:.
chr3	32716396	HG4_PB_pbsv_3167	C	CTTGAACTGTGAGAAGAAGGAAAGAAGGTTGCAGTGAGCGAGATTGGGCCACTCACTCAGCCTTAGGCGACAGAGCAAGATTTCCGTCGCAAAAAAAAAAAAAAAAGTAAAGGGATTGGGAGAAGTGCTCACGCCCTAATCCCAGCACTTTGGGAAGCTGAAGTGGGCGGGATCACCTGAGGTAGGAAGTCAAGACCAGCCTGGGAAGCATTGCAAACCTCGTCTGCACAAAAAAAATTTAAAAATAAGGGCTGGACATGGTGGGCACATTGCATGTAATCCCAGGCTACTCAGGGCTGAGGTGGGAGGATGCTGGCCTGGGAGATCGAGGCTGCAGTGAAGCATGACCACGCCACCTGACCGCATCTTAAGTGGCAGAGAGAGATCCTGTCTCAAAAAAAAAACAAAAAAAAAAGGAGTTACAGACTGATTAAGTCACACCTGATTAATAGGTGTGAGCCACCGCACCCTGGACTAACCTGCATATTTGATCAATAAAAAATATCCCGAGTAAATGTGGCAAGCATGAAGCTTTTGTTCAGATCTGGGTGGTAAATAGGACTTGTCATATATATTCTGTACTTTTCAGTGTTTTGAAAAATCTCATTAATGATGATGATGAGGAAAAACATTTATTCCTCAATTTCCCCCATACTTATAGTTGAAATAATTTATTGGATTATGTTTCAAGAATAATAAAAAGTATATCTAAAATATATATTTTTGTACAAAAGTGAAATTAAAATGGTCCACAGGAGATGGCACCAATTAGATCATTGAAAAACACTCTTCATTTGTAATTTGACACCAGAATTACAAAATAACAGATTACAATAGTGAAAATCCCATGTATACTATTAATAACTTCTATTAACAATATATATATTTTTTGAGGACGGAGGTCTCGCCTCAGGTTTACCCAGGCTGGCAAGTGGCAATGGCGCGATCTCAGCTCACTGCAAACCTCTGCCTTCCCGAGTTCAAGCGATCTCCTGCCTCAGTTCCCGAGTAGCTAGGATCACAGCACCTGCCACCAACACCTGCCTAATTTTTGTATTTTTGTAGAGATGGGGTTTCACCATCCTGGCCAGGCTCGGTCTCGAACTCCGACCTCAGGTGATCTGCCCAGCCATCAGCCTCCAAAACTGCTGGCGATTTACAGGTGTTGAGCCACCGCGCCCTGCCTTTTTTTGTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCCTGCAGCCTCACCTCCTGGGTTCAAGCAATTCTCCTGGCCTCAAAACCTCCAGAGTGCTGGATTACAGGCAGCCGCCAACCACGCCCGGCTAATTTTTGTTATTTTTAGTAGAGACGGGGTTTCACCATGTGAGGCCAGGCTGGTCCGAACTTCTGACTGTGATCCGCCGCCGCGGCCTTCCAAAAGTGCTGGGAGGCCGTGCGGCGGTTGGACTCGTCACGCCTGTAATCCCCAGCACATTTGGGGGGCCGAGGCGCGAGCGGATCAACAAGAAGGTGTCATAGAAGATCGGAACCATCCCGGCATAAAACGGTGATTGAAAACCCCGTCTCTACTAAAAATACAAAAAAATTGCCGGGCGTAGTGGCGGGCGCCTGTAAGTCCCAGCTACTTGGGAGGCTGAGCGCAGGGAGAATGGCGTTGAACCCGGGGAGGGCGGAGCTTGCAGTGAGCCGAGATCCGCCACTGCCACTCCAGCCTGGGCGGGACAGAGCGAGACTCCGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAGTGCTGGGATTACAGGCGGTGAGCCACCATTCCCAGCCTACAACAATATTTTGATATCTGTTAGAGATACCAAAATATAGGTGCTGTGACTCCACACCTGTAATTCCATACCTTTTGGGAGGCCAAGGGCAGGCTGATAGCTTGAGCTCAGGAAGTTTGAGATCAGCCTGGGCAACATAGTGAAACCCCACCTCTACCAAAAATGAAAAAAAAAAAAAAAAAAAGGTCAGGTGTGAGGCTGAAGTGGAGATCACATTGAGCCTGGAAGTCAAGGCCTGCAATGAGCCGAGATGGAGCCACTGCACTTCAGTCCTGAGGCGGACAGACCGAAAGGACCCTGTTTCAAAAAAAAAAAAAAAAAAAGAGGGGGAGGGGCGGGGAAAGGCGAGGCAACAACAAGAAAAGGAAAAGAAAATGATAAAACCACCAAAGCACCAAACATTGTTTAAGACATCTCTACAAGAAATAAGCAAGCTTCTGTCAGGAAGCCTGTGGATGAAAGAGGGAGGAGGCGTAAGCTGTTTAATTTGTTTTTTCTAAGTCCTTTTGCCAAAGAAAGTTATAATCCAGTGAGGATCTAGCAGGAAAAAACAGAAACCACTGTTGTAAGCATTTAAAAAACACTTCAATACTTTTTTTTTTTATATTAAAAAAAAAAAAAGAAGGAATTGAGCCGGCATGCAGTGGCTCACGCCTGTAATCCCAGGCCAACTATTGGGAGCCAAGGCAGGTGAAATCACAATGAGTCAGCGAGTTTCAAAGACCAGCCTGCCAAGATGGTTGAAAACCCCGTCCTCTACTAAAAATACAAAAAAATTTAGCGGGTTGTGGTGGTGGGTGCCTGTAACCTTAGCTTACTCAGGAGGCTGAGCAGAAATTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7316:HG4_PB_pbsv_3167:HG2_PB_PB10Xdip_20658:HG2_PB_HySA_5935:HG2_PB_HySA_5934:HG4_PB_SVrefine2Falcon1Dovetail_1907:HG3_PB_SVrefine2Falcon1Dovetail_1965:HG2_PB_SVrefine2Falcon2Bionano_1420:HG2_PB_SVrefine2PB10Xhap12_2323;NumClusterSVs=9;ExactMatchIDs=HG4_PB_pbsv_3167;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0498668;ClusterMaxSizeDiff=0.0487248;ClusterMaxEditDist=0.112863;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=2690;DistBack=1;DistForward=2;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=221;REFWIDENED=3:32716270-32716490;PctSeqSimilarity=0.9506;PctSizeSimilarity=0.9532;PctRecOverlap=0.9532;SizeDiff=126;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=95;MatchId=3596.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:75:1/1:1:26:2:22:./.:0:0:0:0:./.:1:17:./.:14:224:.:2521:.
chr3	32987103	HG2_PB_SVrefine2PB10Xhap12_2327	G	GTCACCCAGGATGGAGTGCAGTGGCATGATCATGGCTCACTGCAGCCTCAACCTCCTGGGCTCAAGCAGTCCTCCCCTCTCAGCCCCCGAACTAGCTGGGACTGCAGGTGAACACTACAACGTCTGGCTAATTTTTTTGTATTTTTTGTAGAAACGGGGTTTGGCCATGTTGCCGATGTTGGTCTCAAACTCCTGAGCTCGAGCGATCCGCCCTCCTTGGCCTGCCTTGGCCTCCCAAAGTGCTGGGAGTACAGGTGTGAGCCACCGTGCTCAGCTGATTAAATTTTTTAAATGGTCAGCCAGGCGCAGTGGCTTACACCTGTACTCCCAGCACTTTGGGAGGCGGAGGCGGGCAGATCACCTGAGGTCGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCCGTCTCTACTAAAAATACAAAATTAGCCAGGCATGGTGGTGCATACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACTCGGGAGGGCAGAGGTTGCAGTGAGCCAAGATCACGCCATTGCACTCCAGCCTTGGCAAACAGAGCGAAACTCCATCTCAAGAAAAAAAAAAAAGGTTAAAGTCAGGTTTTATATTTATACATATATTTATATAAATTTATATATATATAAATTTATATATTTATATAAATTTTTATATATTTATATAAATATATATATTTATATATATATAAATATATATATTTATATATTTATATATATTTATGTAAATATATATATTTATATCAATTTATATAAATTGATATAAATTGGTATATATTTATATAAATTGATATATATTTTTATATATTTATATAAATTGATATATTTTATATATTTATATAAATTGATATATATTTATATAAATTTATATATATTTATATATTTACTTATATTTATATATGTATATACATTTCCATATATATTTATATACGTATCTATTTATATATATTTACATAGATTTATGTTTATATATATTTATCTACATTTACATATGTTTATCTATAGCTATATTTATATATTTATCTATATTTATATTTATCTATATATATTTATATTTATATTTAACTATATTTATATATATTTATATTTCTATATATTTCTATATATTTATATATTTCTATATATTTATATATTTCTATATATTTCTATATATTTTTATATATTTTCATATATATTTATATATATTTATATATCTTTATATATTTACATATTTTTATATATTTATATATATTTATATATTTACATATATTTTTATATATATTTATATTTTATATATATTTATATATTTTTTATATATTTATATATATTTTTATATATTTTTATATATATATTTTTTTATCTATATTTATATATATTTATATCTATATTTATGTATATTTATATATTTATATCTATATTTATGTATATTTATATATAGCTATATTTATGTATATTTATATATTTATAGCTATATTTATCTATATTTATATATTTATATCTATATTTTTCTATATATATCTATATTTTTCTATATTTATATATTTATCTATATTTATATATATTTTATATATTTATATATTTATATACATTTATATACATATATATTTATATACATTTATTTATATATATTTATATACATATATTTATATACATTTATATGTATATATTTATATACGTATACACATATACGTATATACGTGTATATACGTATATACGTGTATATACGTATATATACGTATATACGTGTATATACGTATATATACGTATATACGTATATATACGTATATATACACGTATATACGTATATACCTATATATACGTATCTATATACATAGATACGTATATACGTATATATAGGTATATACATAGATACGTATATACATATATACATATGTATATACGTATATATATACACGTATATACATGTATATATAGGTATATACATAGATACGTATATACATATGTATATACGTATCTATGTATATACATATATACATATTTACATAGGTATACATATATATTTATATAGGTATACATATTTATATACATACATATAAATATGTATTTATATATAAATATATGTAAAAATATAGATAAATATATATACAAATATATATTTATATATAAATATATATACAAATATATATAATTTTTATATATTATATATGTTTATTTATATTATTTATTATATATTACATACAACATATTACATAATATATATTATACATTATATAATATATTATACATTATATAATACATCATATATTATATGTTATATAATGTATATTGTTATATATTATATATTATATATTATACATTATATAATATATGTAATATATGTAATATACTATATATAATATAATGTAATATATGTAATATATATGTAATATAATATATAATATATCATATATAATATATACTATATTATATAGTACATAATATACACTATATTATATGGTACATACTATATAATATATTACATAGTACATAATATAAATATATATTAATATATTCATATTATAATATAATATGATATAATAATAAACAATAATATTTATTATAAATAATAATAAATAAAATAATTATAAATAATAATATTTAATAATATAATATATAATATATATTATACAATATATAATATATATTATATACAATATATAATATATGATATATAATTATATATAATATATAATTATATGTAATATATGATATATAATTATATATAATATATAATTATATGTAATATATGATATATAATTATATATAATATATATAATTATATATAATATACTATAATATATATAATTATATATAATATAATATATTACATATAATATAATATACATATAATTATATATAATATATTACATATAATTATATATAATTACATATAATATAATATATTACATATATATAATTATATATAATATAATATATTACATATAATATATAGTTGTATATAACAATATATTATATATAATGTAATATATGTCATAATATATAATATAATATATTATATATAATATATAACAATATATTATAATATAATATATAACATAATACATTATATATAATATAATATATAACATAATATATTATATATATAATATATAACATAATATATTATATATATAATATAATTATATATAACATAATATATTATATATATAATATAATTATATATAACATAATATATTATATATATAATATAATTATATATAACATAATATATTATATATAATATATAATTATATATAACGTAATATATTATATATAATATATAATTATATATAACGTAATATATTATATATAATATATAATTATATATAACGTAATATATTATATATAATATACTATATATAATATATATAATTATATATAATATATATAATTATATATAATATATATAATTATATATAATATATATTATATATAATATAATATATATTATATATTATAAAATAATTATATAATTAATTATATATTAAATATGTATTTTATATAATATAATAAAATATAATATATATTGTATATAATTAATATATATAATATATAAATGATATTAATGATATTTATATATATTAATTATATTATATATTTATATTTATATATATTTTATGTATAAATATATATATAATATATATATTTATAGATATTTGAGCAAATTTTGCTAGGATATATTTTTCTAGGAATGTATCCATTTTATTTGTTTTAAAATGCATTGTAATAAAGTAGTACATGACATTCCTCTACTCTCTAGTTTTTGTTTTGTGTTTTGAGAGAGAGTTTGCTCTTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2327:HG2_PB_HySA_5940:HG4_PB_pbsv_3171:HG2_PB_pbsv_3160:HG2_PB_PB10Xdip_20659:HG4_PB_HySA_4753:HG4_PB_assemblyticsfalcon_17021:HG2_PB_assemblyticsfalcon_17392:HG3_PB_assemblyticsfalcon_17329:HG2_PB_assemblyticsPBcR_16805:HG4_PB_SVrefine2Falcon1Dovetail_1911:HG2_PB_SVrefine2Falcon1plusDovetail_7904:HG3_PB_SVrefine2Falcon1Dovetail_1969:HG2_PB_SVrefine2Falcon2Bionano_1424:HG2_PB_SVrefine2PBcRplusDovetail_7320;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2327:HG2_PB_SVrefine2PBcRplusDovetail_7320;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0814883;ClusterMaxSizeDiff=0.0814883;ClusterMaxEditDist=0.165943;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=3797;DistBack=20;DistForward=24;DistMin=20;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=3:32987104-32987169;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9997;PctRecOverlap=0.9971;SizeDiff=-1;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=99;MatchId=3597.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:77:./.:0:1:0:1:./.:0:0:0:0:1/1:0:27:1/1:1:501:.:3863:.
chr3	33085263	HG2_PB_SVrefine2Falcon2Bionano_1425	G	GAAAGATACCTCAGAAAAATACCAAGCAAAAGATACCTCAGAAAAATACCAAGCAAAAGATACCTCAGAAAAATACCAAGCAAAAGATACCTCAGAAAAATACCAAGCAAAAGATACCTCAGAAAAATACCAAGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7905:HG2_PB_assemblyticsfalcon_17393:HG2_Ill_breakscan11_3298:HG2_PB_pbsv_3162:HG3_PB_pbsv_3127:HG2_PB_SVrefine2Falcon2Bionano_1425:HG3_PB_HySA_4848:HG3_Ill_Spiral_3388;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1425;NumExactMatchSVs=1;ClusterMaxShiftDist=0.264;ClusterMaxSizeDiff=0.256;ClusterMaxEditDist=0.296;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=135;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=31;REFWIDENED=3:33085264-33085294;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3598.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:27:0|1:19:4:1:20:./.:0:0:0:0:0/1:16:6:./.:.:.:.:.:.
chr3	34859777	HG3_Ill_manta_703	A	AATGATAAACATAGATATAAAACTTATCAGTGAGATACTAGCAAATCAAATTTACAGCACATTATAAGAATCATGCATCAGGATGAAATGAAATTTATCCTGAAG	20	PASS	ClusterIDs=HG2_PB_HySA_5957:HG3_PB_pbsv_3132:HG2_PB_pbsv_3166:HG4_PB_pbsv_3182:HG4_Ill_svaba_4026:HG4_Ill_manta_770:HG4_Ill_MetaSV_3330:HG4_Ill_GATKHCSBGrefine_2199:HG4_Ill_Cortex_2328:HG3_Ill_svaba_4046:HG3_Ill_manta_703:HG3_Ill_Spiral_3399:HG3_Ill_MetaSV_3360:HG3_Ill_GATKHCSBGrefine_2106:HG3_Ill_Cortex_2364:HG2_PB_SVrefine2Falcon2Bionano_1431:HG2_Ill_svaba_3917:HG2_Ill_manta_889:HG2_Ill_SpiralSDKrefine_10906:HG2_Ill_SVrefine2DISCOVARplusDovetail_8408:HG2_Ill_MetaSV_3198:HG2_Ill_GATKHCSBGrefine_2106:HG2_Ill_Cortex_5513:HG2_10X_SVrefine210Xhap12_2383;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2383:HG2_Ill_Cortex_5513:HG2_Ill_GATKHCSBGrefine_2106:HG2_Ill_MetaSV_3198:HG2_Ill_SVrefine2DISCOVARplusDovetail_8408:HG2_Ill_SpiralSDKrefine_10906:HG2_Ill_manta_889:HG2_Ill_svaba_3917:HG2_PB_SVrefine2Falcon2Bionano_1431:HG3_Ill_Cortex_2364:HG3_Ill_GATKHCSBGrefine_2106:HG3_Ill_MetaSV_3360:HG3_Ill_Spiral_3399:HG3_Ill_manta_703:HG3_Ill_svaba_4046:HG4_Ill_Cortex_2328:HG4_Ill_GATKHCSBGrefine_2199:HG4_Ill_MetaSV_3330:HG4_Ill_manta_770:HG4_Ill_svaba_4026;NumExactMatchSVs=20;ClusterMaxShiftDist=0.046729;ClusterMaxSizeDiff=0.0373832;ClusterMaxEditDist=0.113744;PBcalls=5;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=104;DistBack=8070;DistForward=32190;DistMin=8070;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:34859778-34859780;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3599.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:41:0|1:43:3:2:36:./.:0:0:0:0:0/1:31:25:./.:.:.:.:.:.
chr3	35346621	HG2_Ill_MetaSV_3200	T	TAGAAAAGTAAAATAGAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATATAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_5962:HG3_PB_pbsv_3135:HG2_PB_pbsv_3171:HG3_PB_assemblyticsfalcon_17349:HG2_PB_assemblyticsPBcR_16822:HG2_PB_SVrefine2PBcRplusDovetail_7327:HG2_PB_SVrefine2PB10Xhap12_2334:HG2_PB_assemblyticsfalcon_17409:HG3_Ill_MetaSV_3362:HG3_Ill_GATKHCSBGrefine_2110:HG2_Ill_MetaSV_3200:HG2_PB_SVrefine2Falcon1plusDovetail_7912:HG3_PB_HySA_4868:HG2_PB_PB10Xdip_20661;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_3200:HG3_Ill_GATKHCSBGrefine_2110;NumExactMatchSVs=2;ClusterMaxShiftDist=0.284281;ClusterMaxSizeDiff=0.284281;ClusterMaxEditDist=0.307692;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=1228;DistForward=3561;DistMin=1228;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:35346622-35346637;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3600.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:51:0|1:24:0:0:39:./.:0:0:0:0:0/1:23:15:0/1:7:22:.:.:.
chr3	35409265	HG2_Ill_MetaSV_3201	G	GCTTCCTGGAGAGCAGGAAGTCAAGCATTTTAGACTCACCCTGATCCCATAGGATCTTAAAGACCTTTAAGATCTTTAATCTTAAAGGTCTTTAAGATCCTATGGGATCAGGGTGAGTCTAAAATGCTTGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3300:HG2_PB_pbsv_3172:HG4_PB_SVrefine2PBcRDovetail_1674:HG4_PB_pbsv_3186:HG3_PB_pbsv_3136:HG4_PB_SVrefine2Falcon1Dovetail_1918:HG4_PB_assemblyticsfalcon_17042:HG3_PB_assemblyticsfalcon_17350:HG2_PB_assemblyticsfalcon_17412:HG2_PB_assemblyticsPBcR_16823:HG4_Ill_svaba_4030:HG4_Ill_manta_773:HG4_Ill_SVrefine2DISCOVARDovetail_2352:HG4_Ill_MetaSV_3332:HG4_Ill_GATKHCSBGrefine_2204:HG4_Ill_250bpfermikitraw_4360:HG4_Ill_150bpfermikitraw_4176:HG3_PB_SVrefine2Falcon1Dovetail_1978:HG3_Ill_svaba_4053:HG3_Ill_manta_704:HG3_Ill_Spiral_3405:HG3_Ill_SVrefine2DISCOVARDovetail_2353:HG3_Ill_MetaSV_3363:HG3_Ill_GATKHCSBGrefine_2111:HG3_Ill_250bpfermikitraw_4231:HG3_Ill_150bpfermikitraw_4098:HG2_PB_SVrefine2PBcRplusDovetail_7328:HG2_PB_SVrefine2PB10Xhap12_2335:HG2_PB_SVrefine2Falcon2Bionano_1435:HG2_PB_SVrefine2Falcon1plusDovetail_7913:HG2_Ill_svaba_3927:HG2_Ill_manta_892:HG2_Ill_SpiralSDKrefine_10914:HG2_Ill_SVrefine2DISCOVARplusDovetail_8414:HG2_Ill_MetaSV_3201:HG2_Ill_GATKHCSBGrefine_2112:HG2_10X_SVrefine210Xhap12_2387:HG2_PB_HySA_5963:HG2_PB_PB10Xdip_20662;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2387:HG2_Ill_GATKHCSBGrefine_2112:HG2_Ill_MetaSV_3201:HG2_Ill_SVrefine2DISCOVARplusDovetail_8414:HG2_Ill_SpiralSDKrefine_10914:HG2_Ill_manta_892:HG2_Ill_svaba_3927:HG2_PB_SVrefine2Falcon1plusDovetail_7913:HG2_PB_SVrefine2Falcon2Bionano_1435:HG2_PB_SVrefine2PB10Xhap12_2335:HG2_PB_SVrefine2PBcRplusDovetail_7328:HG3_Ill_150bpfermikitraw_4098:HG3_Ill_250bpfermikitraw_4231:HG3_Ill_GATKHCSBGrefine_2111:HG3_Ill_MetaSV_3363:HG3_Ill_SVrefine2DISCOVARDovetail_2353:HG3_Ill_Spiral_3405:HG3_Ill_manta_704:HG3_Ill_svaba_4053:HG3_PB_SVrefine2Falcon1Dovetail_1978:HG4_Ill_150bpfermikitraw_4176:HG4_Ill_250bpfermikitraw_4360:HG4_Ill_GATKHCSBGrefine_2204:HG4_Ill_MetaSV_3332:HG4_Ill_SVrefine2DISCOVARDovetail_2352:HG4_Ill_manta_773:HG4_Ill_svaba_4030:HG4_PB_SVrefine2Falcon1Dovetail_1918:HG4_PB_SVrefine2PBcRDovetail_1674;NumExactMatchSVs=29;ClusterMaxShiftDist=0.144487;ClusterMaxSizeDiff=0.144487;ClusterMaxEditDist=0.259259;PBcalls=16;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=130;DistBack=25368;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=3:35409266-35409272;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:70:1/1:2:38:3:28:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr3	35510595	HG2_PB_assemblyticsfalcon_17413	G	GAGTGCTAATTGGTCCATTCTTACAGAGTGCTGATTGGTGCATTTACAAACCTTTAGCTAGACACAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20663:HG4_PB_pbsv_3187:HG3_PB_pbsv_3137:HG2_PB_HySA_5964:HG4_Ill_svaba_4031:HG4_Ill_scalpel_3002:HG4_Ill_manta_774:HG4_Ill_Krunchall_4585:HG4_Ill_GATKHC_5247:HG4_Ill_GATKHCSBGrefine_2205:HG4_Ill_250bpfermikitraw_4361:HG4_Ill_150bpfermikitraw_4177:HG3_PB_assemblyticsfalcon_17352:HG3_Ill_svaba_4054:HG3_Ill_scalpel_3202:HG3_Ill_manta_705:HG3_Ill_Krunchall_4362:HG3_Ill_GATKHC_5265:HG3_Ill_GATKHCSBGrefine_2112:HG3_Ill_250bpfermikitraw_4232:HG3_Ill_150bpfermikitraw_4099:HG2_PB_assemblyticsfalcon_17413:HG2_PB_assemblyticsPBcR_16824:HG2_Ill_svaba_3928:HG2_Ill_scalpel_3080:HG2_Ill_manta_893:HG2_Ill_Krunchall_4376:HG2_Ill_GATKHC_5163:HG2_Ill_GATKHCSBGrefine_2113:HG2_Ill_250bpfermikitraw_4310:HG3_PB_HySA_4870:HG2_PB_PB10Xdip_20664;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4310:HG2_Ill_GATKHCSBGrefine_2113:HG2_Ill_GATKHC_5163:HG2_Ill_Krunchall_4376:HG2_Ill_manta_893:HG2_Ill_scalpel_3080:HG2_Ill_svaba_3928:HG2_PB_assemblyticsPBcR_16824:HG2_PB_assemblyticsfalcon_17413:HG3_Ill_150bpfermikitraw_4099:HG3_Ill_250bpfermikitraw_4232:HG3_Ill_GATKHCSBGrefine_2112:HG3_Ill_GATKHC_5265:HG3_Ill_Krunchall_4362:HG3_Ill_manta_705:HG3_Ill_scalpel_3202:HG3_Ill_svaba_4054:HG3_PB_assemblyticsfalcon_17352:HG4_Ill_150bpfermikitraw_4177:HG4_Ill_250bpfermikitraw_4361:HG4_Ill_GATKHCSBGrefine_2205:HG4_Ill_GATKHC_5247:HG4_Ill_Krunchall_4585:HG4_Ill_manta_774:HG4_Ill_scalpel_3002:HG4_Ill_svaba_4031;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0735294;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.170213;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=-9744;DistForward=-1;DistMin=-9744;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=203;REFWIDENED=3:35510592-35510794;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3602.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:64:1/1:4:22:3:20:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr3	36460130	HG2_PB_SVrefine2PB10Xhap12_2341	T	TCAATTGTTCATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20671:HG2_PB_pbsv_3180:HG2_PB_assemblyticsPBcR_16835:HG3_PB_pbsv_3145:HG3_PB_HySA_4888:HG2_PB_HySA_5984:HG2_PB_SVrefine2PB10Xhap12_2341:HG2_PB_SVrefine2PBcRplusDovetail_7333:HG2_Ill_breakscan11_3301;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2341;NumExactMatchSVs=1;ClusterMaxShiftDist=0.149254;ClusterMaxSizeDiff=0.149254;ClusterMaxEditDist=0.19403;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=20078;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:36460131-36460145;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9761;PctRecOverlap=0.9761;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:46:0|1:13:3:1:29:./.:0:0:0:0:0/1:24:12:0/1:10:15:.:.:.
chr3	36839145	HG2_PB_SVrefine2PB10Xhap12_2342	T	TGAAATCAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCGGGAGTGCCGTGGCGCGATCTCCGCTCACTGCAAGCTCCCCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3302:HG4_PB_HySA_4786:HG2_PB_pbsv_3182:HG4_PB_pbsv_3196:HG3_PB_pbsv_3147:HG3_PB_assemblyticsfalcon_17364:HG2_PB_assemblyticsPBcR_16839:HG2_PB_assemblyticsfalcon_17423:HG2_10X_SVrefine210Xhap12_2393:HG3_Ill_MetaSV_3365:HG2_PB_HySA_5987:HG4_PB_SVrefine2PBcRDovetail_1681:HG4_PB_SVrefine2Falcon1Dovetail_1922:HG3_PB_SVrefine2Falcon1Dovetail_1982:HG3_Ill_GATKHCSBGrefine_2123:HG2_PB_SVrefine2PBcRplusDovetail_7334:HG2_PB_SVrefine2PB10Xhap12_2342:HG2_PB_SVrefine2Falcon2Bionano_1439:HG2_PB_SVrefine2Falcon1plusDovetail_7918:HG2_PB_PB10Xdip_20673:HG2_PB_PB10Xdip_20672:HG3_PB_HySA_4893;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1439:HG2_PB_SVrefine2PB10Xhap12_2342:HG2_PB_SVrefine2PBcRplusDovetail_7334:HG3_Ill_GATKHCSBGrefine_2123:HG3_PB_SVrefine2Falcon1Dovetail_1982:HG4_PB_SVrefine2Falcon1Dovetail_1922;NumExactMatchSVs=6;ClusterMaxShiftDist=0.127243;ClusterMaxSizeDiff=0.127243;ClusterMaxEditDist=0.210361;PBcalls=18;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=308;DistBack=16805;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:36839146-36839159;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3604.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:1/1:0:25:0:19:./.:0:0:0:0:1/1:0:33:1/1:2:55:.:.:.
chr3	38399697	HG2_PB_SVrefine2Falcon1plusDovetail_7921	T	TAAAGGTTTGGTCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTTAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGACCGACCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2398:HG4_PB_pbsv_3207:HG3_PB_pbsv_3152:HG2_PB_assemblyticsPBcR_16850:HG2_PB_SVrefine2PBcRplusDovetail_7338:HG2_PB_SVrefine2PB10Xhap12_2349:HG3_PB_HySA_4909:HG4_PB_HySA_4806:HG2_PB_HySA_6007:HG2_PB_PB10Xdip_20692:HG2_PB_PB10Xdip_20691:HG2_Ill_GATKHCSBGrefine_2128:HG3_Ill_GATKHCSBGrefine_2128:HG4_Ill_GATKHCSBGrefine_2221:HG4_Ill_MetaSV_3341:HG3_Ill_MetaSV_3368:HG2_Ill_MetaSV_3205:HG2_PB_assemblyticsfalcon_17433:HG2_PB_SVrefine2PBcRplusDovetail_7337:HG2_PB_SVrefine2PB10Xhap12_2348:HG2_PB_SVrefine2Falcon2Bionano_1443:HG2_PB_SVrefine2Falcon1plusDovetail_7921:HG4_PB_SVrefine2PBcRDovetail_1685:HG4_PB_SVrefine2Falcon1Dovetail_1927:HG3_PB_SVrefine2Falcon1Dovetail_1986;NumClusterSVs=25;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7921:HG2_PB_SVrefine2Falcon2Bionano_1443:HG2_PB_SVrefine2PB10Xhap12_2348:HG2_PB_SVrefine2PBcRplusDovetail_7337;NumExactMatchSVs=4;ClusterMaxShiftDist=0.105622;ClusterMaxSizeDiff=0.105622;ClusterMaxEditDist=0.194399;PBcalls=18;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=292;DistBack=7;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=3:38399698-38399708;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9966;PctRecOverlap=0.9932;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3605.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:80:./.:0:2:0:2:./.:0:0:0:0:1/1:0:12:./.:.:.:.:.:.
chr3	38626083	HG2_PB_pbsv_3189	A	AGAGGGGAGGAGCCAATGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAGACGGTGAATTCTGCAATTTCCATCTGAGGTAACCGGGTTTATCTCCTCTCACTAAGGGAGTGCCAACAGTGGGGCGAGGCCAGTGTGTGTGCGCATTACTCGTTGGCGCGAGGAGCCCGAAGCAAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTTCCTTTCCGAGTCAAAGAAACGGGTGACGGACCGCACCTGGAAAATCGGGTCACTCCCAGCCTCGAATATTGCGTTTTCAGAACGCGGCTTAAGAAACGGCGCACTCACGAGACTATATCCCAACCACTGGCTCGGAGGGTCCTACGCGCCTACGGAATCTCGCTGATTGCTAGCAGCAGCAGTCTGAGATCAAACTGCAAGGCGGCAAACGAGCTGGGGGAGGGGCGCCCGCATTTGCCCAGGCTTGCTAGGTAAACAAAGGCAGCCGGGATAAGGACCTCGAACTGGGTGGGAGCCGCCACACGCTCAAGGAGGCGCTGCATGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAGACAGCAAGTAACCTCTTGCAGACTTAAGTGTCCTGTCCGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCCACGCAGCTGGAGATCTGAGAACGGCAAGACGTGCCTCTCATAGTGGGTCCCTGATCCTGACCCCCGAGCAGCCTAGACGGGAGGCAACCCCCCAGCAGGGGCACGACTGACACTCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCTGTCTGTTAGAAGGAAAACTAACAACGCAGAAAGGACATCTACACCGAAAACCCTCTGTACATCACCATCATCAAAGACCAAAAGTAGATAACAACAACCACAAAGATGGGGAAAAAACAGAACAGAAAACTGGAAACTCTAAAACGCAGAGCGCACTCTCACATCACCAAAGGAACGGCAGTTCCTCACCAGCCAACAGAACAAACGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTCAGACGAATCAAATACTCTGAGCTACGGGAAGGACATCAAAACCAAAGGCAACCAGAAAGTTGAAACTTGGAAAAATTTAGAAGAAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAAACAGGTCGAGAACTACGTGAAGAATGCCAGAAGCCTCAGGGCCGACTGCTGATCAACTGGAAAGAAAAGGGTATAAGCAATGGAAGATGAAAATGAATGAAATCAAGCGAGAAGGGAAGTTTAGAGAAAAAGAATAAAAGAAATGAGCAAGCTCCAAGAAAATATGGAACTATGTGAAAAAGACAAATCTACGTCTGATTGGTGTACCTGAAAAGTGGAAATGTGGGAGAATGATAACCAGTTGGCAAAACTCTGCAGGATATTATCCGGAGAACTTCCACAATCTAGCAAGGCAGGCCCAACGTTAGATTCAGGAAATAAGAGAAACGCCACATAAGATACATCCTCGAGAAGAGCAACGTCCAAGACACAAGACATAATTGTCAGATTCCCACCAAAGTTGAAATGAGGAAAAAATGTTAAGGGCAGCCAGAGAAGAAAGGTCGGGTTTACCCTCAAAGGAAAGCCCATCAGACTTAACAGCGGATCTCTCGGCCGAGAAACCCTACAAGCCAGAAGAGAAGTGGGGGGCCAATATTCCACATTTCTAAAGAAAAGGAATTTTCCACCCAGAATTTATACAATCCAGCCCACTAAGCTTCATAAGTGAAAAAAAGGGGGGAAAAAGAAACTAAAATACTTTATAGACAAGCAAATGTTTGAGAAGATTTTCGTCACCACGCAGGCCTGCCCTAAAAAAGAGCCTCCTGAAGGAAGCGCTAAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCACATGCCAAAATGTAAAGACACATCGAGAGCTAGGAAAGAAACTGCATCAACAGTAATGACGCAAAATCACCAGCTAAACATCATAATGACAGGATCAAATTCACACAAACAAATATTAACTTAAATACTAATGGACTAAATTCGCAATTAAAAGACCACAGAAAACTGGCAAGTTGGAATAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGGTGCAGAGACACACCAAGGCTCAAAGATAAAAGGATGGAGGAAGATCTAACCAAGCCTAATGGAAAACAAAAAAAAAGGCAGGGGTTGGCAATTTCCTAGTCTCTGATAAAACAAGACTTTAACAACAAAGATCAAAAGAGAAAAGAAGGCATTACATAATGGTCAAGGGCTCAATTCAACAGAGGAGCTAACTATCCTAAATATTCATGCACGCATACAGGAGCACCAATTCCATAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCACACATTAATAATGGAGACTTTACACCCCACTGTCAACATTAGACAGATAACGAGACAGAAAAGTCACAACAAGGATACCCCAGGAATTGAACTCAGGCTTTCTGCACTGCAAGGCAGAAACTAATAGAACATCTACAGAACTCTCCAGCCCCAAATCAACAGAATTATAGCATTTTTTTCAGCACCAACCACACTATCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAGAACAGAAATTTAACAATATCTGCTCAGACCACAGTGCATCAATACTAGAAACTCAGGATAAAGAATCTCACTCAAGCGCTCAACTACATTGAAACTGAACATGACCTGCTCCTTGAATGACTACTGGGTACACATAACGAAATGAAGGCAGAAATAAGATGTTCTTTGAAACCAACGAGAAAAGAACCAACATACCCAGATCTCTGGGACGCACTCAAGAGATGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAGAGAAAGCAGGAAAGATCCAAAATTGACACCCGCTAACATCACAAATTAAAAGAACTTAGAAAAGCAAGAGCAAAACAACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTACAATCAGAGCAGAACTGAAGGAAATAGGAACAGAAAACCTTTCAAAAAATCAAAATGAAATCCAGGAGCTTGGTTTTTTGAAAGGATCAACAAATTGATAGACCGCTAGCCAAGACTACATAAGAAAAAAAGAGAGAAGAAATCAAATAGACACAATAAAAAATGATAAGGGATATCACCACGGTCCCGTACAGAATCAAAACTACATGCAGAGAATACTACAACACGCCTGCTATCGCAATAACTAGAAAAATCTAGAAGAAAATGGATACATTCTCGACCATACACTCTCAGCAAGAACCTAAACCAGGAAGAAGTTGGAATCTCTTGTTTAATCGACCAATAACAGGCTCTGAAATTGTGCAATAATCAATAGTTTACCAAGCCAAAAAGAGTTCCAGGACGCAGATGGAATTTCACAGCCGAATTCTAAAACGCACGAGGTTACAAGGAGGAAACTGGTACCATTCTTCTGAAACTATTCCAATCAAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTTGAGGCCAGAATCATACTGATACCAAAGCCGGGGCAGAGACACAAACCAAAAGAAGAATTTTAGAACCAATTACCTTGATGAACATTGATCAAAAATCCCTCAGTAAAATACTGGCAAAGTTCCGATCAGCAGCACATCAAAAATAAGCTTATCCCCAATGATCAAGTGGGCTTCATCCCTGGGATGCAAGCTGGTTCAATACACGCAAATCAAATAAATGTAATGCAGCATTAAACCAGAGCCAAAGACAACAAACTACATGATTAATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCATACAACCTTCATGCTAAAACTCTCAAATAAATTTAAAGGTAATTGGATGGGACGTATTTCAAACATGAATAAAGAGGTATCTATGACAAACCCACAGCCAATTTCATACTGAATGGGCAAAACTGAAAGCAGACTTCTTGAAAACGGCTACAAAGACAGGGAATGCCTCGATCTTCACCACCTCTATTCAACATAGTGTTGGAAGTTTTCTGGCAGGGCAGATCAGGCAGGAGAAGGAATAAAGGGTATTCATTAAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGACAACCCATCGTCTCAGCCCAAATATCCTTAAGCTGATAAGCAACTTCAGCAAAAGTCTCCAGGATACAAATCAATGTACAAAAATCCACAAGCATTCCCCTTATACACCAACAACAGACAAACAGAGAGCTCAAATCATGGTGAACTCCCATTCAGTCATTGCTTCAAAAGAATAAATAACCTAGGAATCCAACTTACAAGAGTGTGAAGGACCTCTTCAAGGAGAACTACAGAACCACTGCTCAAGGAATAAACGAGGAGACAAACAAAATGGAAGAACATTCCATGCTCCATGGGTAGGAAGATATCAATATCGTGAAAATGGCTCATACTGGCCCAAGGTATTTACAGATTTCAATGGCCATCCCCCAAATCAAGCTACAATGACTTTCTTCACAGCAATTGGAAAAAAACTACTTTAAAAGTTCATATGGAACGCAAAAAAAAGAGCCCGCATTGCCAAGTCAATCCTACAGCCTAAAAGAACAAAGCTGGAGCATCAACAGATACCTGACTTCAAACTATACGTACAAGGCTACAGTAAAGCCAAAACCAGCCAATGGTAGTGGTCCAAAACAGAGATATAGATCATGGACACAGAACAGAGCCTAGAAATAATGCCGCATATCTACAAACTATTCTGATTTCTTTGACAAACTGAGAAAAAACAAGCAATGGGAAAGGAATTCCATATTTAATAAAATGGCTGCTGGGAAAACTGGCTAGCCATATGTAGAAAAGCCTGAAACTGGATCCCTTCCTTACACTTATACAAAAATCCAATTGCAAGAATGGATTAAAGATTTTAAACGTTAAACCTAAAACCATAAAAACGCCTAGAGAGAAACCTAGGCATTACCATTCAGGACATAGCGGCGTGGGCAACGGACTTCATGTCCAGAACACAAAAAAGCAATGGCAACAAAAAGACAAAATTGACATGGGACTTAATTTCAACTAAGAGCTTCTGCCACAGTCAAAGAACACCATCAGAGTGACAGGCAACCTACAACATGGAGAAAATTTCTTTGCACCCTACTCATCTGACAAAAGGCTAATATCCGAGAATCTACAAATGAACTCAACCAAATTACAAGAAAAAACAAACACCATCAAAAAGTGGCGAAGGACATTGAACCAACCACTTCCAAAGAAGACATTTATGCAGCCAAAAACACATGAGAAATGCTCATCATCACTGGCTCATCAGAGAAATGCAAATCAAAGCCACCTATGAGAATATCATCTCACACCAGTTAGAATGGCCAATCATTTAAAATCAGGAAACAACAGGTGCTGGAGAGATGGCCGGAGAATAAACACTTTTAACACTGTTGGTGGGACTAGTAAACTAGTTTTAACCATTGTGGTAAGTCAGTGTGGCGATCCCTCAGGGATCTTGAACTAGAAATACATTTGACCTCAGCATCCCCATTACTGGGTAATATACCAAATGAGTAATAAATCATCGCCTGCTGATAAAGACACATGCACACGTATGTTTATTTGCCGGCACTATTCACAATAGCAGAAGACTTGGAACCAACCCAAATGCCCAACCATGATAGACTGATTAAGAAAATGTGGCACATAAATACTACCATGATATCTATGCAGCGCATAAAAAATGATAGTTGCATATCCTTTGTAGGGACATGATGAATGGCAACCATCATTCTCAGTAAACTATCGCAAAGAACAAAAAACGTCAAACACCGCATATTCTCACCATAGGTGGTAATTGAACATGAGATCACATGGACACGGAAGGGGAGATTATCACAACTCTGGGGGACTGTGGTGGGGTCGGGAGGGGAAGGGGATAGCATTGGGAGATATACCTAAATGCTAGACTACACATTAGTGGGTGCAGTGCACAGCATGGCACCTGTATACATCTGTAAACTAACCTGCACAAATGTGCAACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAGAAATTGTAAAAAAAAAATTTTATAAATAAAACAAGAAGAATATGAAAAAAAAAAAAAAAAAAGAATGAGTAAATAATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7339:HG2_PB_pbsv_3189:HG2_Ill_breakscan11_3304:HG2_PB_HySA_6010;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_3189;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0334917;ClusterMaxSizeDiff=0.0330086;ClusterMaxEditDist=0.105356;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=6312;DistBack=29432;DistForward=1069;DistMin=1069;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=3:38626061-38626083;PctSeqSimilarity=0.95;PctSizeSimilarity=0.9688;PctRecOverlap=0.9686;SizeDiff=197;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=96;MatchId=3606.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:58:1|0:8:35:19:5:./.:0:0:0:0:0/1:36:12:0/1:191:29:.:6179:.
chr3	39215977	HG3_Ill_SVrefine2DISCOVARDovetail_2364	G	GGGCCGGGCGCGGTGGCTCACGCCTGTAATCCTAGCAATTTGGGAGGCCGAGATGGGCGGATCACGAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTTTCTACTAAAAATACAAAAAATTAGCCGGGCGTGTTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCATGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAACCTGGGAGACACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGTGGATCTGCTTTTTTATTTTTATTTTTTGAAATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTACAATGGTTCGATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGGGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGATGCCTGCCACCAGGCTAGGCTAATTTTTGTATTTTTTAGTAAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAACTCCTGACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAATGCTGGGATTACAGGCATGAGCCACCGTGCCCCGCCTGGATCTGCTTTTTCTATAAAATTATATCTTTCTTGAGGTGGCAGAGCCTTTTTAAAAAGTCCTATTTTCTTTCCTTTGATAAAATTCATACATATACATGATTAAAAATATCAAAAATGGAAGAAAATGAAAAGTTAGGTCTCATTTCTTCTGTTTACCCTTAGATGTCTCCACTAGAGCCACCATTAAGAGTTTTTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1928:HG4_PB_pbsv_3208:HG4_PB_SVrefine2PBcRDovetail_1687:HG4_PB_HySA_4811:HG2_PB_HySA_6014:HG4_PB_HySA_4810:HG3_PB_HySA_4916:HG2_PB_PB10Xdip_20693:HG3_Ill_MetaSV_3369:HG3_PB_SVrefine2PBcRDovetail_1567:HG3_PB_SVrefine2Falcon1Dovetail_1987:HG3_Ill_SVrefine2DISCOVARDovetail_2364:HG2_PB_SVrefine2PBcRplusDovetail_7340:HG2_10X_SVrefine210Xhap12_2400:HG2_PB_SVrefine2PB10Xhap12_2350:HG2_PB_SVrefine2Falcon2Bionano_1444:HG4_PB_SVrefine2PBcRDovetail_1686:HG2_PB_SVrefine2Falcon1plusDovetail_7922;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2400:HG2_PB_SVrefine2PBcRplusDovetail_7340:HG3_Ill_SVrefine2DISCOVARDovetail_2364:HG3_PB_SVrefine2Falcon1Dovetail_1987:HG3_PB_SVrefine2PBcRDovetail_1567;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0786182;ClusterMaxSizeDiff=0.0454002;ClusterMaxEditDist=0.229899;PBcalls=15;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=822;DistBack=25667;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=302;REFWIDENED=3:39215978-39216279;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.9988;PctRecOverlap=0.949;SizeDiff=-1;StartDistance=-42;EndDistance=-42;GTMatch=0;TruScore=98;MatchId=3607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:97:1/1:0:32:0:21:./.:0:0:0:0:1/1:0:37:./.:9:102:.:1568:.
chr3	39288961	HG2_Ill_svaba_3959	A	AAGACTTGGGGGAATGACTTATGTTTATTGTCAACCCATGAATAGTCATGGGTTGACAAACTATAGTCCATGAGCCAAATCTGGCCCTCCACCTACTTTTGTAAATAAAATTTTATTGGAACCCAGCTAGATCCTTTCATTTACTTATTGTCTATGGCTGCTTTCATACTGCAATGGCAGAGTTGAGTAGAAG	20	PASS	ClusterIDs=HG4_PB_HySA_4814:HG2_PB_pbsv_3193:HG4_PB_pbsv_3210:HG2_Ill_Spiral_221:HG2_PB_assemblyticsPBcR_16859:HG2_Ill_breakscan11_3305:HG4_Ill_svaba_4066:HG4_Ill_manta_779:HG4_Ill_SVrefine2DISCOVARDovetail_2364:HG4_Ill_MetaSV_3342:HG4_Ill_GATKHCSBGrefine_2223:HG2_PB_SVrefine2Falcon2Bionano_1446:HG2_Ill_svaba_3959:HG2_Ill_manta_896:HG2_Ill_SpiralSDKrefine_10934:HG2_Ill_SVrefine2DISCOVARplusDovetail_8429:HG2_Ill_MetaSV_3207:HG2_Ill_GATKHCSBGrefine_2130:HG2_10X_SVrefine210Xhap12_2402:HG2_PB_SVrefine2PBcRplusDovetail_7342;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2402:HG2_Ill_GATKHCSBGrefine_2130:HG2_Ill_MetaSV_3207:HG2_Ill_SVrefine2DISCOVARplusDovetail_8429:HG2_Ill_SpiralSDKrefine_10934:HG2_Ill_manta_896:HG2_Ill_svaba_3959:HG2_PB_SVrefine2Falcon2Bionano_1446:HG4_Ill_GATKHCSBGrefine_2223:HG4_Ill_MetaSV_3342:HG4_Ill_SVrefine2DISCOVARDovetail_2364:HG4_Ill_manta_779:HG4_Ill_svaba_4066;NumExactMatchSVs=13;ClusterMaxShiftDist=0.138298;ClusterMaxSizeDiff=0.138298;ClusterMaxEditDist=0.153034;PBcalls=6;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=192;DistBack=11;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=3:39288962-39288965;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3608.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:33:0|1:39:1:0:29:./.:0:0:0:0:0/1:20:13:./.:.:.:.:.:.
chr3	40241617	HG2_PB_pbsv_3201	C	CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACCCGGAGTCTCGCTACCCTGTTCGCAGGCCTGGAGTGCAGTGGCGGGAATCTTCGGCTCACTCAAGCTCCGCCCTTCCCCGGCGTTTCACGCCATTCTCCTGCCTCAGCCGTTCCCGAGTATTGGCTGGGACTACAGGGCGCCCCCACCGACCCCGGCTAATTTTTGTATTTCTCAGTAATGAGACGGGGCTTCACCGTTTTAGCCGGTATAGGTCTCGATCTCCTGAACTCGTGCATCGCCCGCCTCGGCTCCCAAAGTGCTGCGGATTACAGCGCGTGAGCACCACGGGCCGCCTTACAT	10	PASS	ClusterIDs=HG2_PB_HySA_6029:HG4_PB_pbsv_3216:HG2_PB_PB10Xdip_20701:HG2_PB_assemblyticsPBcR_16870:HG2_PB_assemblyticsfalcon_17450:HG3_PB_SVrefine2Falcon1Dovetail_1991:HG2_PB_pbsv_3201:HG4_PB_SVrefine2Falcon1Dovetail_1932:HG2_PB_SVrefine2PBcRplusDovetail_7346:HG2_PB_SVrefine2PB10Xhap12_2356:HG2_PB_SVrefine2Falcon1plusDovetail_7926:HG4_PB_HySA_4823;NumClusterSVs=12;ExactMatchIDs=HG2_PB_pbsv_3201;NumExactMatchSVs=1;ClusterMaxShiftDist=0.1952;ClusterMaxSizeDiff=0.1824;ClusterMaxEditDist=0.239617;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=340;DistBack=-1;DistForward=3517;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=3:40241618-40241622;PctSeqSimilarity=0.9217;PctSizeSimilarity=0.9706;PctRecOverlap=0.9589;SizeDiff=10;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=95;MatchId=3609.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:45:1|0:4:33:17:5:./.:0:0:0:0:./.:37:4:0/1:6:17:.:1386:.
chr3	43565780	HG2_PB_SVrefine2PBcRplusDovetail_7355	G	GCACAGATCATGTTTATTCTTCCTCCCATGCTTTTGTTCCAGTAGTTCTCACACAGATAATGATGAAATTTCAAGTTTCTATAAAGGTGGTGTAAACATGTTTCTAATTAAGAGTATTTTTTCTACCCAGTTTTAAAGACCCAGGTT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3307:HG4_PB_pbsv_3229:HG3_PB_pbsv_3172:HG2_PB_pbsv_3212:HG2_PB_assemblyticsfalcon_17478:HG2_PB_assemblyticsPBcR_16901:HG4_PB_SVrefine2PBcRDovetail_1698:HG4_PB_SVrefine2Falcon1Dovetail_1943:HG4_Ill_svaba_4089:HG4_Ill_manta_782:HG4_Ill_SVrefine2DISCOVARDovetail_2384:HG4_Ill_MetaSV_3348:HG4_Ill_GATKHCSBGrefine_2239:HG4_Ill_Cortex_2341:HG3_PB_SVrefine2PBcRDovetail_1578:HG3_PB_SVrefine2Falcon1Dovetail_2002:HG3_Ill_svaba_4112:HG3_Ill_manta_715:HG3_Ill_Spiral_3470:HG3_Ill_SVrefine2DISCOVARDovetail_2387:HG3_Ill_MetaSV_3375:HG3_Ill_GATKHCSBGrefine_2146:HG3_Ill_Cortex_2374:HG3_Ill_250bpfermikitraw_4308:HG3_Ill_150bpfermikitraw_4178:HG2_PB_SVrefine2PBcRplusDovetail_7355:HG2_PB_SVrefine2PB10Xhap12_2367:HG2_PB_SVrefine2Falcon2Bionano_1458:HG2_PB_SVrefine2Falcon1plusDovetail_7936:HG2_Ill_svaba_3988:HG2_Ill_manta_901:HG2_Ill_SpiralSDKrefine_10957:HG2_Ill_SVrefine2DISCOVARplusDovetail_8451:HG2_Ill_MetaSV_3212:HG2_Ill_GATKHCSBGrefine_2147:HG2_Ill_Cortex_5539:HG2_10X_SVrefine210Xhap12_2415:HG2_PB_PB10Xdip_20721;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2415:HG2_Ill_Cortex_5539:HG2_Ill_GATKHCSBGrefine_2147:HG2_Ill_MetaSV_3212:HG2_Ill_SVrefine2DISCOVARplusDovetail_8451:HG2_Ill_SpiralSDKrefine_10957:HG2_Ill_manta_901:HG2_Ill_svaba_3988:HG2_PB_SVrefine2Falcon1plusDovetail_7936:HG2_PB_SVrefine2Falcon2Bionano_1458:HG2_PB_SVrefine2PB10Xhap12_2367:HG2_PB_SVrefine2PBcRplusDovetail_7355:HG3_Ill_150bpfermikitraw_4178:HG3_Ill_250bpfermikitraw_4308:HG3_Ill_Cortex_2374:HG3_Ill_GATKHCSBGrefine_2146:HG3_Ill_MetaSV_3375:HG3_Ill_SVrefine2DISCOVARDovetail_2387:HG3_Ill_Spiral_3470:HG3_Ill_manta_715:HG3_Ill_svaba_4112:HG3_PB_SVrefine2Falcon1Dovetail_2002:HG3_PB_SVrefine2PBcRDovetail_1578:HG4_Ill_Cortex_2341:HG4_Ill_GATKHCSBGrefine_2239:HG4_Ill_MetaSV_3348:HG4_Ill_SVrefine2DISCOVARDovetail_2384:HG4_Ill_manta_782:HG4_Ill_svaba_4089:HG4_PB_SVrefine2Falcon1Dovetail_1943:HG4_PB_SVrefine2PBcRDovetail_1698;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0602007;ClusterMaxSizeDiff=0.0533333;ClusterMaxEditDist=0.197368;PBcalls=14;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=146;DistBack=29081;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:43565781-43565781;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3611.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:73:1/1:1:27:0:27:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr3	45542652	HG2_Ill_GATKHCSBGrefine_2154	A	ATGGAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCATGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_4975:HG2_PB_pbsv_3220:HG4_PB_pbsv_3237:HG2_PB_assemblyticsfalcon_17500:HG3_PB_pbsv_3178:HG2_PB_HySA_6080:HG2_Ill_MetaSV_3216:HG4_Ill_MetaSV_3351:HG4_Ill_GATKHCSBGrefine_2247:HG3_Ill_GATKHCSBGrefine_2153:HG2_Ill_GATKHCSBGrefine_2154:HG4_PB_HySA_4855;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2154:HG3_Ill_GATKHCSBGrefine_2153:HG4_Ill_GATKHCSBGrefine_2247:HG4_Ill_MetaSV_3351;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0864198;ClusterMaxSizeDiff=0.0802469;ClusterMaxEditDist=0.189911;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=-10;DistForward=-1;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=3:45542653-45542662;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3612.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:26:0|1:25:1:0:21:./.:0:0:0:0:0/1:25:11:0/1:12:54:.:.:.
chr3	46536559	HG2_PB_SVrefine2Falcon1plusDovetail_7945	C	CCCCCTGCCGGCCAGCCGCCCGTCCGGGAGGGAGGTGGGGGGGTCACCCCCCCGCGGCCAGCTGCCCCGTCCGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGAGGTGGGGGGGTCAGCCCCCGCCCGACCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGAGTCAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2009:HG2_PB_assemblyticsfalcon_17514:HG2_PB_SVrefine2Falcon1plusDovetail_7945:HG2_PB_PB10Xdip_20731:HG4_PB_pbsv_3245:HG4_PB_SVrefine2Falcon1Dovetail_1949:HG2_PB_pbsv_3226:HG2_PB_SVrefine2Falcon2Bionano_1465:HG3_PB_pbsv_3183:HG2_PB_SVrefine2PB10Xhap12_2376:HG3_PB_SVrefine2PBcRDovetail_1581;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7945;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0670926;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.241002;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=310;DistBack=20;DistForward=611;DistMin=20;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=326;REFWIDENED=3:46536255-46536580;PctSeqSimilarity=0.9761;PctSizeSimilarity=0.9538;PctRecOverlap=0.6062;SizeDiff=-15;StartDistance=121;EndDistance=121;GTMatch=0;TruScore=84;MatchId=3613.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:49:0|1:22:3:5:44:./.:0:0:0:0:0/0:52:1:0/1:6:4:.:.:.
chr3	46661845	HG3_PB_SVrefine2Falcon1Dovetail_2010	A	AAAGAAGCTATTGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCGGCTAAAACGTGAAACCCCGTCTCTACTGAAAATACAAAAATAGGGGTAGTGGCGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAG	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_20732:HG3_PB_SVrefine2Falcon1Dovetail_2010:HG4_PB_pbsv_3246:HG2_PB_HySA_6090:HG2_PB_SVrefine2PBcRplusDovetail_7363:HG2_PB_assemblyticsPBcR_16926:HG2_PB_SVrefine2PB10Xhap12_2378:HG4_PB_HySA_4863:HG4_PB_SVrefine2Falcon1Dovetail_1950:HG4_PB_SVrefine2PBcRDovetail_1704;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2010;NumExactMatchSVs=1;ClusterMaxShiftDist=0.320138;ClusterMaxSizeDiff=0.316695;ClusterMaxEditDist=0.347676;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=310;DistBack=-14;DistForward=9;DistMin=-14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:46661846-46661859;PctSeqSimilarity=0.9782;PctSizeSimilarity=0.9568;PctRecOverlap=0.9569;SizeDiff=-14;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=96;MatchId=3614.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:32:0|1:34:1:0:22:./.:0:0:0:0:0/1:14:7:0/1:11:22:.:.:.
chr3	46782487	HG4_Ill_SVrefine2DISCOVARDovetail_2398	C	CTATATATATCTAGCTTATATATCTAGATATATGTATCTATATATATATATCTCTAGAGATATATGTAGATATATATATCTCTAGACATATATGTAGATATATATCTCTAGAGATATATGTAGATATATATATGTCTAGAGATATGTAGATATATATATCTCTAGAGATATATGTAGATATATATATCTCTAGAGATATATGTAGATATATATATATATCTCTAGAGATATATGTAGATATATATATATCTAGAGATATATGTAGATATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1467:HG4_Ill_SVrefine2DISCOVARDovetail_2398:HG3_PB_SVrefine2PBcRDovetail_1582;NumClusterSVs=3;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1467:HG4_Ill_SVrefine2DISCOVARDovetail_2398:HG3_PB_SVrefine2PBcRDovetail_1582;NumExactMatchSVs=3;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=269;DistBack=-1;DistForward=12;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=301;REFWIDENED=3:46782488-46782788;PctSeqSimilarity=0.9248;PctSizeSimilarity=0.989;PctRecOverlap=0.0623;SizeDiff=-3;StartDistance=-254;EndDistance=-254;GTMatch=0;TruScore=65;MatchId=3615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:43:0|1:29:2:0:32:./.:0:0:0:0:0/1:37:16:./.:.:.:.:.:.
chr3	46881771	HG2_Ill_SVrefine2DISCOVARplusDovetail_8472	A	AAGGAAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAAGAAAGGAAAGAAAGAAAGACAGACGGATGGACGGAAGGAAGGAAAGAAAGAAAGGGAAAGAGAAGAAGGGAAGGAAGGGAGGGAGGAAGGAAGAAAGGAAGGAAGGGAGGGAGGGAGGAGGAGGGAGGGAGGAAGGAAGAAAAGAGGGAGGCAGGAAGGAAGGAAGGAAGGGAAAGAAAGGGAAAGGGAAAGGAAAGAAAGGAAAGGAAAAGAGGAAATCCAGCCAATCAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_3232:HG2_PB_HySA_6093:HG2_PB_SVrefine2Falcon1plusDovetail_7947:HG3_Ill_MetaSV_3380:HG4_Ill_MetaSV_3357:HG2_Ill_GATKHCSBGrefine_2161:HG2_Ill_MetaSV_3220:HG2_PB_PB10Xdip_20737:HG2_PB_PB10Xdip_20736:HG4_PB_HySA_4869:HG2_PB_SVrefine2PBcRplusDovetail_7365:HG3_PB_SVrefine2Falcon1Dovetail_2012:HG2_PB_SVrefine2Falcon2Bionano_1469:HG4_PB_SVrefine2Falcon1Dovetail_1952:HG2_PB_SVrefine2PB10Xhap12_2380:HG4_PB_SVrefine2PBcRDovetail_1705:HG3_PB_SVrefine2PBcRDovetail_1584:HG4_Ill_SVrefine2DISCOVARDovetail_2399:HG3_Ill_SVrefine2DISCOVARDovetail_2402:HG2_Ill_SVrefine2DISCOVARplusDovetail_8472:HG2_10X_SVrefine210Xhap12_2424:HG3_PB_HySA_4987:HG3_PB_pbsv_3186:HG4_PB_pbsv_3250;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2424:HG2_Ill_SVrefine2DISCOVARplusDovetail_8472:HG3_Ill_SVrefine2DISCOVARDovetail_2402;NumExactMatchSVs=3;ClusterMaxShiftDist=0.110935;ClusterMaxSizeDiff=0.110935;ClusterMaxEditDist=0.228663;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=303;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=67;REFWIDENED=3:46881772-46881838;PctSeqSimilarity=0.9984;PctSizeSimilarity=1;PctRecOverlap=0.9868;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=1;TruScore=99;MatchId=3616.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:1:34:1:25:./.:0:0:0:0:1/1:0:15:1/1:2:35:.:.:.
chr3	47472757	HG2_Ill_SVrefine2DISCOVARplusDovetail_8475	T	TACTTAATATTCAAGAGAGAAACGGACATGGAAACACTGGTATCTTGAGTGGGTGATGGAGGAAGTAAGGGCCAGTGGGGTCCAGATGCCCCTAGGCAAAAGACTCCTAACTAGAGAGAGGCTGTGGTAGGCAGCCTTCTAACACGGTCCCCAACAGTCCACACCTCCTGGTGCTCATGCCCTTGTGTAATCCCATCCCCTTAACAGTGGGCTGGACCTAATGATTTGCTTCTGACAAATAAATACAGCCAAAGCAATAAGAAATCACTTTTCCAATTAGGTTACAAAAGACTATGACTCCTTCTCCCACCCTGGCCCCCTTCTTTTGGGAGCCACCGCTCTGATGAAACCAGCCACCACATTGTGAGCTGCTCAGGGAAGGCCTATGTGGCAAGGAATTGAGGGAGGCCTTCAGCCAATGCACAGTGAGGAACTGAGATCCTCAGCCCAACAGCCTGTAAGGAACCTACCTTTAAGTGAGCTTGGAAGGGGATCCTCCCCCAGTTGACCTTTGAGATGGCAGCAGCCTTGGCTGACAGCTCTACTGTAGTCTTGTGAGAGACCCTGAGCTAAAGGGCCCAGATAAGAAAACCATGGCTCAGAGAGATAAAATGAAGTGTCCGAGGTCACACAATTGATAGGCAACAGAGCCAGGATTGAAACCCAGGGCTGGGTAGCTCTGAACAATATGAGTCTTATGGAGAACAAGACACAGAAGGAAAGGCCTAGCACAAGCGGCGTGGGAGAGGAGCTGAGGTCCTGGGAGCCCTGGAGTCTCCAGCCACCACAGTTCAGAGCATGAGGCTCCCACCCAGAGCTTCCTGGAAACCCTGTGTCCACGCTCACGCAGCCACCACAAACACTGCAATGTTGGCCGTGGAAGTCCAGCATGGAACAAACCCAGCCACCTCTGTGGACCTGCCAGCTAGGCCTTCGTGTGAGGCTCAGGTTTTCACAAATGAGCTAGTCTTGGGGACCCAGGCAGTGCTGGAGACCTCAGGTTTTTGAAAAATGGAATCCTTCCTTTCTATTTAGATACAGCAACCTAGAGCTCCAGGTATTTTACCTTTACACCAGTGTACCCGTGGGCTCCCTCAGAACAGGATGTGGAGGACTCCTGCCACTCAGCTCTTCCTAGAGAAAAGGCCTCCTGATCCTTGCCCTCCAACCCTGGTGGGCAAGGGCTGTGGTGGGAAGAGCAGGCTCAGGAGACCTGCCTGAGTTCAAATCCCAGTGCCACCACTCCCTGGCTGTGTCCCTTGGATGATGGTCTCTATACTCTCCAAGCCTTGTCTCTTACTGAGGGAAATGAGAATAAAACCTCAGCCCTCACCAGAGCACCATGAGGACCAAACAAAACAACTCCTGTGAACCATCCAGATCTAGCAAAGTGTCTGAAAATATATTAGTTATATCATTTATATTATCCCTTAAAACTATGAAAACGAGTTGGTGTCCCATGCACAATCATCTCAGTCTACAGGTTTCTCCAAGTTCAATACGATGGGTCTTCTTATCACCACTGTCGTCGAGTCATTGCCTCTAAGGGAATGGCTTCCCAATGCCTATGGAATTAAAAGTTTAAACTTCACAGATCAGGAGATTCAACTTGGTTCCACCTAACATGCTCCAGGAAAAACTGCAGACTCACTGTCTCCTAAATAAGCCATACTGTTTCTTTATTCAACAAGAAACCTTTCTTGAGCATCTACTGTGTGTAAAACATTGGAGTGTATAAACTTGAATGAAACATGACTCCAATGGGGTCGTCATGTAGAACACAGAGAAGAAGCAGAGGACATATTGTAAGGGAGCTGGGGAAGGCTTCCTGGAGGAAGTGACTCTGAGCTGAGGTTGATAAAGCCTCAGGAGTGTACTTCTGGTGCACACCACAGGGCAGTCCAAGCACATGAATCTTCATTCTCCCCTCTGCTTGACCAGCCAGACTTGATCAATGACAATGATGACAATGGCAACAGCCACAATCATTTGTTGAATGCAAGTGATGAGCCAGGCACTGTACTAAACCCTTGCACTGTTTCACTTAATCATAAGAATGACAATGTATAATGTAGGTATAATTATCCCACTTTATGGATGTGGAAACTAAAGCACAAGGTGACAGTAACTTGCCCAAGGTCACAGTGCTGGAAAACGTAAAGTCTCTACTGTTTCTGCTTCGTTCTTCTCTTCCTCTGGTAAAAACATCCCTCTGCCCAGAGAGAAATGCCCTTCCCCAAGAGTGGCCACAGAGGCCAATGGTCACAGTGACAACACAGGGTGAGCCGAACTCAGAGCACAAAGACATGGCAGAACTGACTGGAGTCCTTTCTGGAGGACACATAAAGGTTTAACTGTAGGGTGCAGCCATCAATCCCATTGTGGAGAAGCATCTAGCAAAAGGGGAGGAGGAGGGCTACATAAAAAGAGAGCCATCTCCAGCATAGAGAAAGATCCACAATTTAACAAAAAGAAGTCAAACAACTCAAAATGGGGTCATCTGAACACACACATCACAAAGGAAGACAGGCAAATACAATAAGCACTTGAAAAAGTGACTAAGGTCATTAGTCATCTGGGAAATGAAAATTCAAATCACAATCACAATGACATGTCCCTATATTAGAATACGGCTTTTTAAAAAATCCAAACAACTGAAGATACCAAGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20738:HG2_PB_pbsv_3234:HG3_PB_HySA_4997:HG3_PB_pbsv_3189:HG4_PB_pbsv_3253:HG3_PB_SVrefine2PBcRDovetail_1586:HG2_10X_SVrefine210Xhap12_2427:HG2_PB_SVrefine2Falcon1plusDovetail_7949:HG3_PB_SVrefine2Falcon1Dovetail_2014:HG4_PB_SVrefine2Falcon1Dovetail_1954:HG4_Ill_SVrefine2DISCOVARDovetail_2405:HG3_Ill_SVrefine2DISCOVARDovetail_2407:HG2_Ill_SVrefine2DISCOVARplusDovetail_8475:HG2_PB_SVrefine2Falcon2Bionano_1470:HG2_PB_SVrefine2PBcRplusDovetail_7366:HG2_PB_SVrefine2PB10Xhap12_2381:HG4_PB_HySA_4873:HG2_PB_PB10Xdip_20739;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8475:HG3_Ill_SVrefine2DISCOVARDovetail_2407:HG4_Ill_SVrefine2DISCOVARDovetail_2405;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0601336;ClusterMaxSizeDiff=0.0601336;ClusterMaxEditDist=0.262435;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=2668;DistBack=13372;DistForward=17909;DistMin=13372;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=3:47472758-47472761;PctSeqSimilarity=0.9996;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:109:1/1:0:31:0:20:./.:0:0:0:0:1/1:0:49:1/1:6:312:.:2764:.
chr3	47782859	HG4_Ill_GATKHCSBGrefine_2258	T	TAAAAATTATTGCTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3309:HG3_PB_pbsv_3191:HG2_PB_pbsv_3236:HG4_PB_assemblyticsfalcon_17158:HG2_PB_assemblyticsfalcon_17530:HG2_PB_assemblyticsPBcR_16942:HG2_PB_SVrefine2PB10Xhap12_2384:HG4_PB_pbsv_3256:HG4_PB_SVrefine2Falcon1Dovetail_1956:HG2_PB_SVrefine2PBcRplusDovetail_7368:HG4_Ill_manta_789:HG4_Ill_GATKHCSBGrefine_2258:HG3_Ill_MetaSV_3383:HG3_Ill_GATKHCSBGrefine_2160:HG2_Ill_GATKHCSBGrefine_2165:HG2_PB_SVrefine2Falcon1plusDovetail_7951:HG3_PB_SVrefine2Falcon1Dovetail_2016:HG2_PB_HySA_6106:HG4_PB_HySA_4876;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2165:HG3_Ill_GATKHCSBGrefine_2160:HG3_Ill_MetaSV_3383:HG4_Ill_GATKHCSBGrefine_2258:HG4_Ill_manta_789;NumExactMatchSVs=5;ClusterMaxShiftDist=0.235484;ClusterMaxSizeDiff=0.235484;ClusterMaxEditDist=0.287097;PBcalls=13;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=4;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:47782860-47782873;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:51:0|1:19:2:0:35:./.:0:0:0:0:0/1:36:13:0/1:10:36:.:.:.
chr3	47791136	HG2_PB_HySA_6108	G	GACAAAGTGAGACCCTCTAAATTAAACACACACACACACACACACAACACACACACACACACAC	10	PASS	ClusterIDs=HG2_PB_HySA_6108:HG3_PB_pbsv_3192:HG2_PB_pbsv_3237:HG2_PB_assemblyticsfalcon_17532:HG3_PB_HySA_5001;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_6108;NumExactMatchSVs=1;ClusterMaxShiftDist=0.25641;ClusterMaxSizeDiff=0.25641;ClusterMaxEditDist=0.273504;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=63;DistBack=2192;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=46;REFWIDENED=3:47791135-47791183;PctSeqSimilarity=0.9486;PctSizeSimilarity=0.9841;PctRecOverlap=0.619;SizeDiff=1;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=85;MatchId=3620.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:26:./.:3:18:16:8:./.:0:0:0:0:0/1:4:12:./.:.:.:.:.:.
chr3	49342273	HG2_Ill_SVrefine2DISCOVARplusDovetail_8492	T	TGCACCCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCATCCTGAGTAGCTGGAATTACAGGTGCGCACCACCACGCCTGGCTAATTTTTGTATTTTTGGTAGAGACGGGGTTTCACTATGTTGGTCAGGCTGATCTCGAACTCCTGACCTCGTGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGAATGAGCCACCACGCCTGGACTTTTTTGTTGTTGTTGTTGTTTTTTCTTTGAGACAGAGTCTCGTTCTGTCACCCAGGCTGGAGTGCAGAGGCGCAATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTTCCCCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCATCACACCTAGCTAATTTTTTTTTTATGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCCAACTTTTTTGTTGTTTTTAAAGAAACAGAGATTTGGTTGGGCACAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCTAAGGCAGGCAGATCACCTGAGATCAGGAGTTTGAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTACTAAAAATACTAAAATTAGCCAGGCATGGTGGCGCACACCTGTAGTCTTAGCTACTCAGGAGGCTGAGGCATGAGAATCGCCTGCACCCGGGAGGTGTAGGCTGCAGTGAGCCAAGATCATGCCACTGCACTCCAAACTGGGCAAGAGAGTGAGACTCTGTCTCAAACAAAACAAAACAAAAACAGAGTCTCACTATGTTTTCCAGGCTGGTCTCAAACTCCTGGGCTCAAGGGATCCTCCCACCTCGGCCTTCCAAGAAACTGAATTTTTGTAGTCCGGCTTAGGAAACTGACCATTTATTTAAATACTGCCACCACAGAATACAGCATTCTGAGGAGGCAGCTTACAAATAACTTCTGGGACATCCCCAACCCAGAGGTGGGCACTGAGGACACTTAGGGGTGTGCTAAATGACTGAATGACAGAAAAAAGGGCTTGACAATGTGGTGCTTTTAGTCTCAGAAACCATCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCGCAGGCTGGAATGCAGTGGCGCGATCTTGGCTCACTGCAACCTCCATCTCCGGGGTTTAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7964:HG3_PB_assemblyticsfalcon_17473:HG3_PB_SVrefine2Falcon1Dovetail_2026:HG2_PB_PB10Xdip_20770:HG2_PB_PB10Xdip_20771:HG2_PB_HySA_6118:HG3_PB_HySA_5006:HG2_PB_SVrefine2PB10Xhap12_2397:HG2_10X_SVrefine210Xhap12_2438:HG3_Ill_SVrefine2DISCOVARDovetail_2420:HG2_Ill_SVrefine2DISCOVARplusDovetail_8492:HG2_PB_SVrefine2Falcon2Bionano_1480;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8492:HG3_Ill_SVrefine2DISCOVARDovetail_2420;NumExactMatchSVs=2;ClusterMaxShiftDist=0.188679;ClusterMaxSizeDiff=0.176521;ClusterMaxEditDist=0.395165;PBcalls=9;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=1269;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=537;REFWIDENED=3:49342274-49342810;PctSeqSimilarity=0.9739;PctSizeSimilarity=0.9921;PctRecOverlap=0.617;SizeDiff=10;StartDistance=-481;EndDistance=-481;GTMatch=0;TruScore=86;MatchId=3623.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:55:0|1:20:0:0:30:./.:0:0:0:0:./.:0:0:0/1:44:65:.:.:.
chr3	49441527	HG2_Ill_SVrefine2DISCOVARplusDovetail_8493	G	GTACATGTGCACAATGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGCTGTACTGCACCCATTAGCTCGTCATTTAGCATTAGGTATATCTCCTAATGCTATCCCTCCCCCCTCCCCCCACCCCACAACAGTCTCCAGAGTGTGATGTTCCCCTTCCTGTGCCATGTGTTCTGGAAACGGGATTTCCTCATATAATGTTACACAGAAGAATTCTCAGTAACTTATTTGTGGTGTGTGTATTCAACTCACAGAGTTGAACCTTCCTTCAGAAAGAGCAGATTTGAAACACTCTTTTTGTGGAGTTTCCATGAGAATAACTGAAACAATAAGCCTTTCCTATGTAAATATTTGGACACGACTACACTGGCAGAGATAATGCTGTTGGATGGCTGCCCCTCCCTGTAGGCCCACCATGAATGTGACCGCTGCAGGTACAGCCAGACTCAAGTATGTTGCATTGGTGCTGCAATCAGTCTCTAAGAAAATGAATGAAAAGAGCAAGAAGTCGGATCAAAAATACAAGCCAATAACGACTTTACAAGATAAAACAAGTAATTTTCAAAATTGTTGGACTGAAATGATAATAATATATACATAAACAACTCTAGATATGGTCTCTCTTCCTTTTGTCCCTAAATGCTACTTTTAAATTTTCTTT	20	PASS	ClusterIDs=HG2_PB_pbsv_3250:HG2_PB_PB10Xdip_20774:HG4_PB_HySA_4882:HG2_PB_HySA_6119:HG2_PB_SVrefine2PB10Xhap12_2398:HG4_Ill_SVrefine2DISCOVARDovetail_2423:HG4_Ill_MetaSV_3363:HG4_Ill_GATKHCSBGrefine_2264:HG2_Ill_SVrefine2DISCOVARplusDovetail_8493:HG2_Ill_GATKHCSBGrefine_2173:HG2_10X_SVrefine210Xhap12_2440:HG2_PB_SVrefine2Falcon1plusDovetail_7965:HG2_PB_assemblyticsfalcon_17549:HG3_PB_SVrefine2Falcon1Dovetail_2027:HG3_PB_assemblyticsfalcon_17474:HG4_PB_SVrefine2Falcon1Dovetail_1967:HG4_PB_assemblyticsfalcon_17171:HG4_PB_pbsv_3264;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2440:HG2_Ill_GATKHCSBGrefine_2173:HG2_Ill_SVrefine2DISCOVARplusDovetail_8493:HG4_Ill_GATKHCSBGrefine_2264:HG4_Ill_MetaSV_3363:HG4_Ill_SVrefine2DISCOVARDovetail_2423;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0895522;ClusterMaxSizeDiff=0.0895522;ClusterMaxEditDist=0.163676;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=663;DistBack=91;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:49441528-49441528;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3624.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:32:1|0:3:19:16:3:./.:0:0:0:0:0/1:32:16:0/1:12:76:.:.:.
chr3	49783822	HG3_Ill_SVrefine2DISCOVARDovetail_2424	G	GGGCCAGGCACGGTGGCTCACGCTTGTAATCCTAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTAATAAAAATACAAAAAAATTAGCCAGACGTGGTGGTGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAATCCAGGAGGCAGAGCTTGCAGTGAGCCAAGATCGCACCACTGCACTCCAGCCTGGGCGACAGAGCTAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTGTTGTTTTTTTTTTTTTTTGAGACAGTCTCACTCTGTTGCCCAGGCTACAGTGCAGTGGCACAATCTTGGCTCACCGTAACCTCCACCTCCTGGGTTCAAGAGATTCTCCTGCCTCAGCCTTCCAAGTACCTGGGATTACAGGCATGCACCATCACACCCGGCTAATTTTTGTAGTTTTAGTAGAGACAGGGTTTCACCAAATTGGCCAGGCTGGTCTCGAACCCCGGACCTCAAGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTAGGACT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2030:HG2_PB_pbsv_3254:HG3_PB_pbsv_3208:HG3_PB_HySA_5014:HG4_PB_pbsv_3269:HG4_PB_HySA_4886:HG2_PB_PB10Xdip_20777:HG2_PB_PB10Xdip_20776:HG3_Ill_MetaSV_3388:HG4_Ill_MetaSV_3366:HG2_PB_SVrefine2Falcon1plusDovetail_7969:HG2_10X_SVrefine210Xhap12_2445:HG4_PB_SVrefine2Falcon1Dovetail_1971:HG4_Ill_SVrefine2DISCOVARDovetail_2427:HG3_Ill_SVrefine2DISCOVARDovetail_2424:HG2_Ill_SVrefine2DISCOVARplusDovetail_8497:HG2_PB_SVrefine2PBcRplusDovetail_7382:HG2_PB_SVrefine2PB10Xhap12_2401:HG2_PB_SVrefine2Falcon2Bionano_1483;NumClusterSVs=19;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_2424:HG4_Ill_SVrefine2DISCOVARDovetail_2427:HG4_PB_SVrefine2Falcon1Dovetail_1971;NumExactMatchSVs=3;ClusterMaxShiftDist=0.129246;ClusterMaxSizeDiff=0.0580913;ClusterMaxEditDist=0.275229;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=586;DistBack=14501;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=295;REFWIDENED=3:49783823-49784117;PctSeqSimilarity=0.9913;PctSizeSimilarity=0.9949;PctRecOverlap=0.9253;SizeDiff=-3;StartDistance=-43;EndDistance=-43;GTMatch=0;TruScore=97;MatchId=3626.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:24:0:23:./.:0:0:0:0:1/1:0:28:1/1:4:107:.:696:.
chr3	49951073	HG2_PB_SVrefine2PBcRplusDovetail_7383	T	TTAGTGTATTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAGTCTCGCTCTGTCGCCCAGGCTGAGTGCAGTGCGGATCTCGGCTCACTGCAGCTCCGCCTCCGGTTCACGCATTCTCCTGCTCAGCCTCCAAGTAGCTGGACTACAGGCGCCATACGCCGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCTTGTTGCCAGGATGGTTCGATCTCTGACTCGTGATCCCCGCTCGCTCCAAGTGCTGGATTACAGCTGACCCCGCCCGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3311:HG2_Ill_MetaSV_3228:HG2_PB_HySA_6128:HG2_PB_SVrefine2PB10Xhap12_2402:HG2_PB_pbsv_3255:HG2_PB_PB10Xdip_20778:HG2_PB_SVrefine2PBcRplusDovetail_7383:HG2_PB_SVrefine2Falcon1plusDovetail_7970:HG4_PB_HySA_4887;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7383;NumExactMatchSVs=1;ClusterMaxShiftDist=0.161812;ClusterMaxSizeDiff=0.161812;ClusterMaxEditDist=0.190789;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=280;DistBack=2418;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=240;REFWIDENED=3:49951074-49951313;PctSeqSimilarity=0.9289;PctSizeSimilarity=0.8669;PctRecOverlap=0.87;SizeDiff=-43;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=88;MatchId=3627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:32:0|1:19:1:3:22:./.:0:0:0:0:0/1:19:6:./.:.:.:.:.:.
chr3	50063025	HG3_Ill_GATKHCSBGrefine_2173	T	TTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGAGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG	20	PASS	ClusterIDs=HG2_PB_pbsv_3257:HG3_PB_pbsv_3210:HG3_PB_assemblyticsfalcon_17482:HG4_PB_assemblyticsfalcon_17178:HG2_PB_HySA_6130:HG4_PB_SVrefine2Falcon1Dovetail_1972:HG3_PB_HySA_5017:HG3_Ill_MetaSV_3390:HG4_Ill_MetaSV_3367:HG3_Ill_GATKHCSBGrefine_2173:HG4_PB_HySA_4888:HG3_PB_SVrefine2Falcon1Dovetail_2031:HG2_Ill_MetaSV_3229:HG4_PB_pbsv_3270;NumClusterSVs=14;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_2173:HG4_Ill_MetaSV_3367;NumExactMatchSVs=2;ClusterMaxShiftDist=0.295327;ClusterMaxSizeDiff=0.295327;ClusterMaxEditDist=0.306542;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=270;DistBack=3851;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:50072868-50063039;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9963;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3628.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:31:0|1:17:0:4:20:./.:0:0:0:0:0/1:18:6:./.:.:.:.:.:.
chr3	50518301	HG2_PB_SVrefine2PB10Xhap12_2405	A	AGGGAGGAACGGGAGGAAAGGGGAGGAAGGGGGAGGAAAGGGGAGGAAGGGGGAGGAAGGGGGAGGAAGGGGAGGAAGGGGGAGGAAGTGGGAGGAAGGGGGAGGAAATGGGAGGAAGGGGGGGAAGCGGGAGGAAGGGGAGGAAGGGGGGAAGCGGGAGGAAGGGGGGGAAGGGGGAGGAAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7973:HG2_PB_HySA_6132:HG4_PB_pbsv_3273:HG2_PB_PB10Xdip_20788:HG4_PB_SVrefine2PBcRDovetail_1707:HG2_PB_PB10Xdip_20787:HG2_PB_SVrefine2PBcRplusDovetail_7387:HG2_PB_SVrefine2PB10Xhap12_2405:HG3_PB_SVrefine2Falcon1Dovetail_2034:HG4_PB_SVrefine2Falcon1Dovetail_1974:HG2_PB_SVrefine2Falcon2Bionano_1485:HG3_PB_pbsv_3214;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2405:HG2_PB_SVrefine2PBcRplusDovetail_7387;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0773481;ClusterMaxSizeDiff=0.0501393;ClusterMaxEditDist=0.332394;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=183;DistBack=23618;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=80;REFWIDENED=3:50518302-50518381;PctSeqSimilarity=0.9719;PctSizeSimilarity=1;PctRecOverlap=0.6448;SizeDiff=0;StartDistance=-65;EndDistance=-65;GTMatch=1;TruScore=87;MatchId=3629.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:0:16:1:18:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr3	50652760	HG4_Ill_SVrefine2DISCOVARDovetail_2429	G	GTGCATGTGTATCTGTGTGCATGTGTGTTATATGCATGTGTGTTTATACGTGTTATATGCATGTGTGTGCACATGTGTAAAGGTGTGAC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_4431:HG4_PB_pbsv_3274:HG4_PB_assemblyticsfalcon_17181:HG4_PB_HySA_4891:HG2_PB_pbsv_3261:HG2_PB_HySA_6133:HG4_PB_SVrefine2PBcRDovetail_1708:HG4_Ill_SVrefine2DISCOVARDovetail_2429:HG4_Ill_Krunchall_4711:HG4_Ill_GATKHC_5387:HG4_Ill_GATKHCSBGrefine_2270:HG4_Ill_250bpfermikitraw_4488:HG2_PB_SVrefine2Falcon1plusDovetail_7974:HG2_Ill_Krunchall_4503:HG2_Ill_GATKHC_5309:HG2_Ill_GATKHCSBGrefine_2178;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4431:HG4_PB_SVrefine2PBcRDovetail_1708:HG4_Ill_SVrefine2DISCOVARDovetail_2429:HG4_Ill_Krunchall_4711:HG4_Ill_GATKHC_5387:HG4_Ill_GATKHCSBGrefine_2270:HG4_Ill_250bpfermikitraw_4488:HG2_PB_SVrefine2Falcon1plusDovetail_7974:HG2_Ill_Krunchall_4503:HG2_Ill_GATKHC_5309:HG2_Ill_GATKHCSBGrefine_2178;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0879121;ClusterMaxSizeDiff=0.0879121;ClusterMaxEditDist=0.252632;PBcalls=7;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=88;DistBack=38601;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=106;REFWIDENED=3:50652761-50652866;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3630.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:32:./.:8:24:17:3:./.:0:0:0:0:0/1:26:24:./.:.:.:.:.:.
chr3	50879168	HG4_PB_pbsv_3276	C	CCTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCACAGGCCGGACTGCGGACCTGCGTGGCGGCAAATCTCGGCTCAGCTGCAAGCTCCGCTTCCCGGTTCGACGCCATTCTCCCCTGCCTCAAGCTCCCAAGTAGCTGGACTACAAGGCGGCCCGCACCGGGCCCAGGCTAAATTTTTTTGTATCTTTTATGTAGAGACGGGGTTTCACCTTGTTTTACCAGGATGGTTCTCGATCTCCTGAACCTCATGATCCACCCGCCTCGGGCTCCAAGTGCTGGATTACAGGCGTGAGGCCACCGCGCCGGGCCTATTGTTTA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3312:HG3_PB_pbsv_3215:HG2_PB_pbsv_3262:HG4_PB_pbsv_3276:HG3_PB_assemblyticsfalcon_17487:HG3_PB_SVrefine2Falcon1Dovetail_2035:HG2_PB_assemblyticsfalcon_17565:HG4_PB_assemblyticsfalcon_17183:HG4_PB_SVrefine2Falcon1Dovetail_1975:HG3_PB_HySA_5021:HG2_PB_SVrefine2Falcon1plusDovetail_7975:HG3_Ill_MetaSV_3391:HG4_PB_SVrefine2PBcRDovetail_1709;NumClusterSVs=13;ExactMatchIDs=HG4_PB_pbsv_3276;NumExactMatchSVs=1;ClusterMaxShiftDist=0.141667;ClusterMaxSizeDiff=0.138889;ClusterMaxEditDist=0.188889;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=370;DistBack=3;DistForward=7605;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=3:50879160-50879172;PctSeqSimilarity=0.9505;PctSizeSimilarity=0.9649;PctRecOverlap=0.9569;SizeDiff=13;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=95;MatchId=3631.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:1|0:2:26:27:0:./.:0:0:0:0:0/1:33:7:0/1:9:12:.:.:.
chr3	51287116	HG3_Ill_GATKHCSBGrefine_2179	G	GTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCTGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1488:HG3_PB_pbsv_3216:HG4_PB_assemblyticsfalcon_17187:HG4_PB_SVrefine2Falcon1Dovetail_1977:HG3_PB_assemblyticsfalcon_17491:HG3_PB_SVrefine2Falcon1Dovetail_2037:HG4_Ill_GATKHCSBGrefine_2271:HG3_Ill_GATKHCSBGrefine_2179:HG2_Ill_GATKHCSBGrefine_2179:HG2_PB_pbsv_3265:HG3_PB_HySA_5023:HG4_PB_pbsv_3278:HG2_PB_SVrefine2Falcon1plusDovetail_7977;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2179:HG3_Ill_GATKHCSBGrefine_2179:HG4_Ill_GATKHCSBGrefine_2271;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0708661;ClusterMaxSizeDiff=0.0314961;ClusterMaxEditDist=0.244094;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=127;DistBack=-81;DistForward=150113;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=163;REFWIDENED=3:51287040-51287202;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3632.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:36:0|1:21:2:0:33:./.:0:0:0:0:0/1:17:8:./.:.:.:.:.:.
chr3	51469528	HG4_PB_SVrefine2PBcRDovetail_1710	C	CTGGCCAACGTGCTGAAACTCTGTCTTTACTACAAATACAAAAATTAGCTGGGCACAGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATTGCTTGAACCTGGGAGTTGGAGGCTGCAGTGAGCCAAGATGGCACCACTGCACTCCAACCTGGGAGACAGAGCAAGATTCTGTAAAAAAAAAAAAAAAAAAAAAAAGTATAAAAAGTAGCCAGGCATGGTGGCACAAGCCTGTAGTCCTAGCTACCTGGCAGGCTGAGCACTTGGGCAATAGGGCAAGACCCTGTCTCTAAAAATACACAAACATATACACCCCTATATACGATATAAACGTGTGTGTGAATGAATCAGTGAGAGACTAGGTCTGTTGTGTGTTTTTTTTTTTTTAAACGGAGTCTTGCTCTGTAGCCCAGGCTGGAATGCAATGCCACAGTCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTATCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTACACCATGTTGGCCAGGCTGATCTTGAACTCCTGACCTCAGGTGATCCACCCACCTCGACCTCCCAAAGTGCTGTGATTACAGGCGTGAGCCACTGCGCCCGGCCTGTTGTTTTTACAATAACTCATAAATGTCATTGCACTAAGACATCGGAAAAGTGCCTGAAGGCTAATCTTAATGCCACAGAAATGGCAAAAACTAAATAAAGCTCCCAGACTCCAATCCACCCAGCATTTTCCCAGAAGAGTCAGAAAAAAATAGAACCATTTCTAAACAATTTTACATTTTTAGAATGCTTTATAAAGACTAGACTTTCATGTTCCTTGTTTCATTAAAATTTATTCCTTCAACTACTGTTTTTTTCTTATCCAAAAGTCATTCTGCGAATGTGATCTTTTAAAGAGGTTATCCCCAACCTAATCTCATCCCCACAAACCTGTATAGATGACTTACTCTTTCCATGGCATCCTGATTGTAGGATAGGTAATACAAACACATAGACACACCGGTTGCAGCCATAGAAGGACGAGGTATTTCCAGTAATTTCTGTACTCCACCATGCGCAACAAATTCTGTGGCAAATTTGTTATGGAGCAGGAGAGATGCTAGGTGCTAAAAAATGAGGACACAAATTACCACAAAATAATCTAGAAAATTAACAAAATCTCTTGACCTAATATTCAGTTAAGCTGTTAAATACAAAAGCCCTCTAAGGAGACAACCAACCCCTCACAAAAGAAAACCCAGTATTATTTAAAGTAAATAAAAAGACTAAGATTCCTTAACATTCCTCTTTTCTTTCCTAACACCAGGAAATTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCAGTCTTGGCTCACTGCAACCTCCGCCTCCCAGGTGCAATCGATTCTCCTGCCTCAGCCTCCCAAGCAGCTAGGATTACAGATACCCGCCACCACGTCCAGCTAATTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCACCTGTGCCTCCTAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAGCCTGATTTTTTTATGAAGGTGAAAGATATTGCTGTAAGGGCTGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTAGGCAGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCGAAATCCCGTCTCTACTAAAAATACAAAAAATTTGCCAGACGTGGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCGCCTGAACCCGGGAGACGGAGGTTGCAGTGCACCAAGATTGCACCACTGCACTGCAGCCTGGGCGACGGAAGGAGACCCTGTCTCAAAAAAAAAAAAAAAAATTTACTATAAGTAATGATATTGGTCAGGCAGGGTGTCTCACTCCTGCAATTCTAGTACTTTGAGAGGCCAAGGTGAAAAGACTGCTTGAAGCCAGGAGTTCAGGGCCAGCCTGGACAACATAGCACAACCCCATCTCCACAAAAAATTTAAAAATTAACCAAATGCAGTGGCGCATGCCTGTAGTCCCAGTTACTCAGGACGGTGAGGTAAGAGGATCGCTTGAGCCGGGGAGTTCAAGGCTGTAGTGAGCTAGGATCAATTGCACCACTGCACTCCAGCCTGGGTGACAAAGTAAGACCCTGTCAGTCAATCAGACAATCAGTAACCCTACAACCATTTTACTATTACATATTTAGGTTGGTGAAAAACTGCAGTTTTTGCCTTTGAAAGCAATAGCAAAAACCGCAATTACTTTTGCACCAACTTAATAGCTTCCCTAATGGACTTTTGCTAACTTTCCCATTTTAATCCTTTTAATATAAATAGCTCTATATCCTAGCTTTTGCTCAGTGAGTCATCAACTAATGAATTCCCAAAATCTGCCTTCCTTTAAATTGATCAATATATCCCCAAAAGAAGAATCTTGAGCAAAGTATCTAAACAAGTATATTTTTAGAACTAACCACGTGCATTTTAAATAGATGTCTTAAAGTTTTTTTATTTTTTAAGGTTTTTTAACTGCCTGTTCAAGTCCCACTAGCCTCTCTGGGTGGAGATCTCCTGCACAATGTTATGGGCAAAGAGTATAATCCAAGCAGCAGGCTGCTTGATGACTCTGAACCTAGGCCAACATAGACAGGGCCTTGGGAAAGCTAGAGCTCCCCCTACTGTTTCCCATGCCAAGGTGTCTTCCAGGTACCAACAACATAGATTTGTAATTACATGATATGATATCTGCACAAATCTCACCAAGGTCAATGGAAAAAACAGGGATGTGCCCTCTTCAAAAGTTCTCTCAATAACCAGGCTCAGGCTAACCCTTATATATAATTCAAATCCCTTCTATCATTAACCTACTTTTTGTTTGTTACACAACACTCTACCACACTTCCACCCACTCCTTCTCCCAAGATGCAGCTAAACTGTGTGACACCCATTATAATTCTCCACACAAAAACCTTTAAAAATAGCAACTGCCCAATCCCTTCTTCCACTGCACCTTGTTCAGGACCAGAAATTGCAACTGAAAGCAATATCCTTGGGCCACTGGAGACAACTTTGACCTCCAGCTTCATCCCACTGTGCAAAGTATAACCATGAGCTTACACACTTTATATATACACACACACCAAATCCCACATGTAGAGACACGTTACTCTAATTACATCTGACCTCCTCCAAACTTGAAATTTCTGAAAGTTGAAAGGCAAATTTCCTCATTTCTATTCCATTTCAAAATACTTTGGAACTGTACTACTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1489:HG2_PB_pbsv_3266:HG3_PB_pbsv_3217:HG2_PB_PB10Xdip_20795:HG2_PB_PB10Xdip_20794:HG4_PB_assemblyticsfalcon_17188:HG2_PB_assemblyticsfalcon_17570:HG2_PB_assemblyticsPBcR_16972:HG3_PB_assemblyticsfalcon_17492:HG3_PB_SVrefine2Falcon1Dovetail_2038:HG2_10X_SVrefine210Xhap12_2453:HG4_PB_SVrefine2Falcon1Dovetail_1978:HG4_Ill_SVrefine2DISCOVARDovetail_2433:HG3_Ill_SVrefine2DISCOVARDovetail_2431:HG2_Ill_SVrefine2DISCOVARplusDovetail_8503:HG2_PB_SVrefine2Falcon1plusDovetail_7978:HG4_PB_SVrefine2PBcRDovetail_1710:HG2_PB_SVrefine2PBcRplusDovetail_7389:HG2_PB_SVrefine2PB10Xhap12_2408;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1489:HG4_PB_SVrefine2PBcRDovetail_1710:HG2_PB_SVrefine2PBcRplusDovetail_7389:HG2_PB_SVrefine2PB10Xhap12_2408;NumExactMatchSVs=4;ClusterMaxShiftDist=0.166447;ClusterMaxSizeDiff=0.166447;ClusterMaxEditDist=0.221332;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=3442;DistBack=32297;DistForward=69;DistMin=69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=210;REFWIDENED=3:51469529-51469738;PctSeqSimilarity=0.9973;PctSizeSimilarity=1;PctRecOverlap=0.9797;SizeDiff=0;StartDistance=-70;EndDistance=-70;GTMatch=0;TruScore=99;MatchId=3633.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:108:1/1:0:21:0:14:./.:0:0:0:0:1/1:0:13:1/1:3:539:.:3516:.
chr3	51622376	HG2_PB_HySA_6145	C	CCCCGTCTCTGCTAAAAATACAAAAATTAAGCTGGGTGTGGTGGTGCACACCTGTAGTTCCAGCTACTCGGGAGGCTGAGGCGGAGATCACCTGAGGTCAGGAGTTAGAAAACAGCCTGGCCAACATGGTAAAA	10	PASS	ClusterIDs=HG3_PB_pbsv_3218:HG2_PB_HySA_6145:HG2_PB_pbsv_3267:HG3_PB_HySA_5024;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_6145;NumExactMatchSVs=1;ClusterMaxShiftDist=0.156863;ClusterMaxSizeDiff=0.14902;ClusterMaxEditDist=0.32636;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=133;DistBack=-1;DistForward=3693;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=182;REFWIDENED=3:51622290-51622471;PctSeqSimilarity=0.9901;PctSizeSimilarity=0.9852;PctRecOverlap=0.4889;SizeDiff=-2;StartDistance=68;EndDistance=68;GTMatch=0;TruScore=82;MatchId=3634.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:19:./.:17:6:2:8:./.:0:0:0:0:0/1:15:3:./.:.:.:.:1169:.
chr3	51629957	HG2_Ill_SVrefine2DISCOVARplusDovetail_8508	T	TTTTTTTTTTGAGACAGGGTCTCACCCAGGATCACCCAGGCTGGAGTGCAGTGGCGTGATCACGACTCACTGCAGCACCCCAGGGTCAGGTGGTCCTCCCACCTTAGCCTCCCAGGTAGCTGAGACTACAGGTGTGCGTCACCATGCCCAGCTAATTTTTAAAATTTTTTAAAAATTATTATTTTATTTTATTTTATTTTGAGATGGAGTCTCACTCTGTTGCCTGGGCTGGAGTACAGTGGAGCTATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCTCCTGAGTAGTTGGGATTACAGGCATGTGCCACTATGCCTGGCTAATTTTTGTGTGTATGTGTTTTTTTTTAGTAGAGCCGGGGTTTCACCATGTTGGCTAGGCTGGTCTCGAACTTCTGACCTCAAATGATCCACCCACCTCAGCCTCCCAAACTGCTGGGATTACAGCCTTTTAAATTTTTTTTTAAAAAATAGACACAGGGTCTCTCTATGTTGCCAGGCTGCTCTTGAACTCCTGGCCTTAAGCAGTCCTCCTACCTTAGCCTCCCAACGTGCTAGGATTACAGGCATGAGCCACTGCGCCCGGTCTAGCAAATTTTTTTTTTTTTTTTTTTTTGTGTAGAGACAGGGTTTTGCCATGTTGCCCAGGCTGGTCTGGAACTTCTGGGCTCAAGCAATCTGCCTGCCTCAGTCTCCCAAAGTGCTGGGATAACAAGCGTGAGCCACCACACTTGGCCTGGTAATGGTTTTGGGGCTCCATATTTTCTTCTAGCTTAGGTTCAGGTCCAGTCTATTCCCCCACATGAGGTACTTTGGAATATTTAGATGAAGGGAACTCCTGGAATAATCCAGCCTTTATTTTAAAAAGTTTATTTCCAGTTGCTGCTTAATGTATGTTCCAGTGGATGTGAAAGTGTGGAATGGTTGGATACATGTCGCAGGTAGAGTCCTATGTTTTCATGGTTTTGTAAAGGGATTTTCCAGTGTATTGCTGGTTCATTGGCACATTTATTTCCTTGATGTCACTTCACTGTTTTTGTTTTTTGGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7979:HG3_PB_HySA_5025:HG4_PB_pbsv_3280:HG2_PB_HySA_6146:HG3_PB_pbsv_3219:HG2_PB_PB10Xdip_20798:HG2_PB_pbsv_3268:HG2_PB_PB10Xdip_20797:HG4_PB_HySA_4898:HG3_Ill_MetaSV_3392:HG4_Ill_MetaSV_3368:HG4_Ill_GATKHCSBGrefine_2272:HG2_Ill_MetaSV_3230:HG2_Ill_GATKHCSBGrefine_2180:HG4_PB_assemblyticsfalcon_17189:HG3_PB_assemblyticsfalcon_17493:HG4_PB_SVrefine2Falcon1Dovetail_1979:HG4_PB_SVrefine2PBcRDovetail_1711:HG3_PB_SVrefine2Falcon1Dovetail_2039:HG2_PB_SVrefine2PBcRplusDovetail_7390:HG2_10X_SVrefine210Xhap12_2454:HG4_Ill_SVrefine2DISCOVARDovetail_2436:HG3_Ill_SVrefine2DISCOVARDovetail_2432:HG2_PB_SVrefine2PB10Xhap12_2409:HG2_PB_SVrefine2Falcon2Bionano_1490:HG2_Ill_SVrefine2DISCOVARplusDovetail_8508;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8508:HG2_PB_SVrefine2Falcon2Bionano_1490:HG2_PB_SVrefine2PB10Xhap12_2409:HG3_Ill_SVrefine2DISCOVARDovetail_2432:HG4_Ill_SVrefine2DISCOVARDovetail_2436;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0931932;ClusterMaxSizeDiff=0.0931932;ClusterMaxEditDist=0.216385;PBcalls=17;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=1072;DistBack=1050;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=159;REFWIDENED=3:51629958-51630116;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.9972;PctRecOverlap=0.8642;SizeDiff=-3;StartDistance=-145;EndDistance=-145;GTMatch=0;TruScore=94;MatchId=3635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:1/1:0:18:0:16:./.:0:0:0:0:1/1:0:19:0/1:20:157:.:1169:.
chr3	51763929	HG4_PB_SVrefine2PBcRDovetail_1712	C	CCTTTGGTGGTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCAGGTTCACGCCATTCTCCTGCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACGCGCCCGGCCT	20	PASS	ClusterIDs=HG2_PB_HySA_6147:HG2_PB_HySA_6149:HG2_PB_HySA_6148:HG2_PB_pbsv_3270:HG2_Ill_breakscan11_3313:HG4_PB_pbsv_3282:HG4_PB_SVrefine2Falcon1Dovetail_1981:HG4_PB_SVrefine2PBcRDovetail_1712:HG2_PB_SVrefine2Falcon2Bionano_1492;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_1712;NumExactMatchSVs=1;ClusterMaxShiftDist=0.118949;ClusterMaxSizeDiff=0.113416;ClusterMaxEditDist=0.225503;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=341;DistBack=5611;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=3:51763930-51763948;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9855;PctRecOverlap=0.9827;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:0|1:18:3:4:17:./.:0:0:0:0:0/1:26:8:0/1:7:22:.:.:.
chr3	52381084	HG2_PB_SVrefine2Falcon1plusDovetail_7981	A	ATGGGAAAGACAGGCAGCAAGCAGATAAATACATACACACAGTCATTGCCGGTTTTGGCAGGGGCCATGATAGACACTGGGGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1983:HG4_PB_pbsv_3286:HG4_PB_HySA_4901:HG2_PB_pbsv_3273:HG4_PB_SVrefine2PBcRDovetail_1713:HG2_PB_HySA_6156:HG2_PB_SVrefine2PBcRplusDovetail_7392:HG4_Ill_SVrefine2DISCOVARDovetail_2439:HG4_Ill_Krunchall_4722:HG4_Ill_GATKHC_5399:HG4_Ill_GATKHCSBGrefine_2275:HG4_Ill_250bpfermikitraw_4500:HG2_PB_SVrefine2Falcon1plusDovetail_7981:HG2_Ill_SVrefine2DISCOVARplusDovetail_8512:HG2_Ill_Krunchall_4514:HG2_Ill_GATKHC_5319:HG2_Ill_GATKHCSBGrefine_2183:HG2_Ill_250bpfermikitraw_4443;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4443:HG2_Ill_GATKHCSBGrefine_2183:HG2_Ill_GATKHC_5319:HG2_Ill_Krunchall_4514:HG2_Ill_SVrefine2DISCOVARplusDovetail_8512:HG2_PB_SVrefine2Falcon1plusDovetail_7981:HG4_Ill_250bpfermikitraw_4500:HG4_Ill_GATKHCSBGrefine_2275:HG4_Ill_GATKHC_5399:HG4_Ill_Krunchall_4722:HG4_Ill_SVrefine2DISCOVARDovetail_2439;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0609756;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.191617;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=82;DistBack=-82;DistForward=58423;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=86;REFWIDENED=3:52381085-52381170;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3637.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:25:./.:4:0:0:6:./.:0:0:0:0:0/1:17:20:./.:.:.:.:.:.
chr3	52730946	HG2_Ill_SpiralSDKrefine_11010	A	AACCCTCTAAATACACTGGTGAAGAAAAGGAGTCAAAGTGACGGTACCAACAGAGTAATCTCTTATCTACAGACTGACTTCTTAATTC	20	PASS	ClusterIDs=HG3_PB_pbsv_3225:HG4_PB_assemblyticsfalcon_17200:HG2_PB_pbsv_3276:HG2_PB_assemblyticsfalcon_17582:HG2_Ill_breakscan11_3314:HG2_PB_HySA_6160:HG2_PB_SVrefine2Falcon1plusDovetail_7983:HG4_PB_SVrefine2PBcRDovetail_1714:HG4_PB_SVrefine2Falcon1Dovetail_1984:HG4_Ill_svaba_4147:HG4_Ill_manta_792:HG4_Ill_SVrefine2DISCOVARDovetail_2444:HG4_Ill_Krunchall_4725:HG4_Ill_GATKHCSBGrefine_2278:HG4_Ill_Cortex_2349:HG4_Ill_250bpfermikitraw_4502:HG4_Ill_150bpfermikitraw_4299:HG3_Ill_svaba_4172:HG3_Ill_manta_728:HG3_Ill_Spiral_3518:HG3_Ill_Krunchall_4503:HG3_Ill_GATKHCSBGrefine_2182:HG3_Ill_Cortex_2383:HG3_Ill_250bpfermikitraw_4369:HG3_Ill_150bpfermikitraw_4234:HG2_Ill_svaba_4053:HG2_Ill_manta_915:HG2_Ill_SpiralSDKrefine_11010:HG2_Ill_Krunchall_4518:HG2_Ill_GATKHC_5325:HG2_Ill_GATKHCSBGrefine_2186:HG2_Ill_Cortex_5552:HG2_Ill_250bpfermikitraw_4446:HG2_Ill_150bpfermikitraw_4123:HG2_10X_SVrefine210Xhap12_2462:HG4_PB_pbsv_3289;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2462:HG2_Ill_150bpfermikitraw_4123:HG2_Ill_250bpfermikitraw_4446:HG2_Ill_Cortex_5552:HG2_Ill_GATKHCSBGrefine_2186:HG2_Ill_GATKHC_5325:HG2_Ill_Krunchall_4518:HG2_Ill_SpiralSDKrefine_11010:HG2_Ill_manta_915:HG2_Ill_svaba_4053:HG3_Ill_150bpfermikitraw_4234:HG3_Ill_250bpfermikitraw_4369:HG3_Ill_Cortex_2383:HG3_Ill_GATKHCSBGrefine_2182:HG3_Ill_Krunchall_4503:HG3_Ill_Spiral_3518:HG3_Ill_manta_728:HG3_Ill_svaba_4172:HG4_Ill_150bpfermikitraw_4299:HG4_Ill_250bpfermikitraw_4502:HG4_Ill_Cortex_2349:HG4_Ill_GATKHCSBGrefine_2278:HG4_Ill_Krunchall_4725:HG4_Ill_SVrefine2DISCOVARDovetail_2444:HG4_Ill_manta_792:HG4_Ill_svaba_4147:HG4_PB_SVrefine2Falcon1Dovetail_1984;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0898876;ClusterMaxEditDist=0.26087;PBcalls=9;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=87;DistBack=11;DistForward=27301;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:52730947-52730948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3638.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:27:0|1:41:2:0:22:./.:0:0:0:0:0/1:42:26:./.:.:.:.:.:.
chr3	53254647	HG2_Ill_250bpfermikitraw_4450	T	TACAAAGAATACAAAAATTAGCTGGGTGTGGTGGTGCACACCTGTAGACTGAGCTTACTCGGGGTGACCCTGTGTAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7986:HG2_PB_pbsv_3280:HG2_PB_PB10Xdip_20805:HG2_PB_PB10Xdip_20804:HG2_PB_HySA_6166:HG4_Ill_Krunchall_4731:HG4_Ill_GATKHC_5407:HG4_Ill_GATKHCSBGrefine_2279:HG4_Ill_250bpfermikitraw_4507:HG3_Ill_Krunchall_4506:HG3_Ill_GATKHC_5425:HG3_Ill_GATKHCSBGrefine_2183:HG3_Ill_250bpfermikitraw_4371:HG3_Ill_150bpfermikitraw_4236:HG2_Ill_GATKHC_5329:HG2_Ill_GATKHCSBGrefine_2188:HG2_Ill_250bpfermikitraw_4450:HG3_PB_pbsv_3228:HG3_PB_HySA_5033:HG4_PB_HySA_4909:HG4_Ill_SVrefine2DISCOVARDovetail_2450:HG3_Ill_SVrefine2DISCOVARDovetail_2442:HG2_PB_SVrefine2PBcRplusDovetail_7397:HG2_PB_SVrefine2PB10Xhap12_2415:HG2_PB_SVrefine2Falcon2Bionano_1495;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4450:HG2_Ill_GATKHCSBGrefine_2188:HG2_Ill_GATKHC_5329:HG3_Ill_150bpfermikitraw_4236:HG3_Ill_250bpfermikitraw_4371:HG3_Ill_GATKHCSBGrefine_2183:HG3_Ill_GATKHC_5425:HG3_Ill_Krunchall_4506:HG4_Ill_250bpfermikitraw_4507:HG4_Ill_GATKHCSBGrefine_2279:HG4_Ill_GATKHC_5407:HG4_Ill_Krunchall_4731;NumExactMatchSVs=12;ClusterMaxShiftDist=0.103226;ClusterMaxSizeDiff=0.0903226;ClusterMaxEditDist=0.261438;PBcalls=11;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=-51;DistForward=42;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=156;REFWIDENED=3:53254555-53254710;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:1|0:4:28:24:1:./.:0:0:0:0:0/1:21:21:./.:.:.:.:.:.
chr3	53269957	HG3_Ill_150bpfermikitraw_4238	G	GGGCCCCTGGGGAGGGTGGGCGAGGGGGTGAGGCTAGAGGAAGGGAGACCAGTTCAGGGACTCTGAGCCCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3315:HG2_PB_HySA_6168:HG3_PB_pbsv_3229:HG2_PB_assemblyticsfalcon_17589:HG4_Ill_svaba_4152:HG4_Ill_manta_793:HG4_Ill_Krunchall_4733:HG4_Ill_GATKHC_5409:HG4_Ill_GATKHCSBGrefine_2280:HG4_Ill_Cortex_2351:HG4_Ill_250bpfermikitraw_4509:HG4_Ill_150bpfermikitraw_4304:HG3_PB_assemblyticsfalcon_17506:HG3_Ill_svaba_4177:HG3_Ill_manta_729:HG3_Ill_Spiral_3521:HG3_Ill_Krunchall_4508:HG3_Ill_GATKHC_5427:HG3_Ill_GATKHCSBGrefine_2184:HG3_Ill_Cortex_2385:HG3_Ill_250bpfermikitraw_4373:HG3_Ill_150bpfermikitraw_4238:HG2_PB_assemblyticsPBcR_16992:HG2_Ill_svaba_4059:HG2_Ill_manta_916:HG2_Ill_SpiralSDKrefine_11016:HG2_Ill_Krunchall_4523:HG2_Ill_GATKHC_5331:HG2_Ill_GATKHCSBGrefine_2189:HG2_Ill_Cortex_5555:HG2_Ill_250bpfermikitraw_4452:HG2_Ill_150bpfermikitraw_4127:HG4_PB_assemblyticsfalcon_17207:HG2_PB_PB10Xdip_20807:HG2_PB_PB10Xdip_20806;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4127:HG2_Ill_250bpfermikitraw_4452:HG2_Ill_Cortex_5555:HG2_Ill_GATKHCSBGrefine_2189:HG2_Ill_GATKHC_5331:HG2_Ill_Krunchall_4523:HG2_Ill_SpiralSDKrefine_11016:HG2_Ill_manta_916:HG2_Ill_svaba_4059:HG2_PB_assemblyticsPBcR_16992:HG3_Ill_150bpfermikitraw_4238:HG3_Ill_250bpfermikitraw_4373:HG3_Ill_Cortex_2385:HG3_Ill_GATKHCSBGrefine_2184:HG3_Ill_GATKHC_5427:HG3_Ill_Krunchall_4508:HG3_Ill_Spiral_3521:HG3_Ill_manta_729:HG3_Ill_svaba_4177:HG3_PB_assemblyticsfalcon_17506:HG4_Ill_150bpfermikitraw_4304:HG4_Ill_250bpfermikitraw_4509:HG4_Ill_Cortex_2351:HG4_Ill_GATKHCSBGrefine_2280:HG4_Ill_GATKHC_5409:HG4_Ill_Krunchall_4733:HG4_Ill_manta_793:HG4_Ill_svaba_4152;NumExactMatchSVs=28;ClusterMaxShiftDist=0.057554;ClusterMaxSizeDiff=0.0431655;ClusterMaxEditDist=0.18705;PBcalls=8;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=8646;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=3:53269956-53269959;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3640.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:5:31:1:23:./.:0:0:0:0:1/1:0:30:./.:.:.:.:.:.
chr3	53499998	HG2_PB_SVrefine2Falcon2Bionano_1496	T	TCAGTTTAGCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGAGTAGCTGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3316:HG3_PB_pbsv_3231:HG2_PB_PB10Xdip_20808:HG3_PB_assemblyticsfalcon_17509:HG2_PB_pbsv_3283:HG4_PB_assemblyticsfalcon_17208:HG2_PB_assemblyticsfalcon_17591:HG3_PB_HySA_5035:HG4_PB_pbsv_3296:HG3_PB_SVrefine2Falcon1Dovetail_2044:HG4_PB_SVrefine2Falcon1Dovetail_1988:HG2_PB_SVrefine2Falcon1plusDovetail_7987:HG2_PB_SVrefine2PB10Xhap12_2416:HG2_PB_SVrefine2Falcon2Bionano_1496:HG2_PB_HySA_6171;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1496;NumExactMatchSVs=1;ClusterMaxShiftDist=0.168142;ClusterMaxSizeDiff=0.168142;ClusterMaxEditDist=0.262537;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=332;DistBack=1762;DistForward=12117;DistMin=1762;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=3:53499999-53500015;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.9852;PctRecOverlap=0.9881;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:38:1|0:0:22:25:1:./.:0:0:0:0:0/1:35:8:0/1:7:26:.:.:.
chr3	54512688	HG3_Ill_150bpfermikitraw_4252	T	TGTATATATATATATATATATATTGCTATATATATATATATATATTGCTATATATATATATATATTG	20	PASS	ClusterIDs=HG2_PB_HySA_6181:HG3_Ill_Spiral_3533:HG3_PB_pbsv_3232:HG2_Ill_manta_917:HG3_PB_HySA_5045:HG4_PB_HySA_4916:HG4_Ill_GATKHC_5419:HG4_Ill_GATKHCSBGrefine_2282:HG3_Ill_GATKHC_5443:HG3_Ill_GATKHCSBGrefine_2186:HG2_Ill_GATKHC_5342:HG2_Ill_GATKHCSBGrefine_2191:HG4_PB_pbsv_3299:HG2_PB_pbsv_3285:HG4_Ill_svaba_4159:HG3_Ill_svaba_4188:HG3_Ill_Krunchall_4519:HG3_Ill_250bpfermikitraw_4386:HG3_Ill_150bpfermikitraw_4252:HG2_Ill_svaba_4067:HG2_Ill_Krunchall_4532:HG2_Ill_250bpfermikitraw_4462:HG2_Ill_150bpfermikitraw_4136:HG4_PB_assemblyticsfalcon_17215:HG2_PB_assemblyticsfalcon_17600:HG3_PB_assemblyticsfalcon_17516;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4136:HG2_Ill_250bpfermikitraw_4462:HG2_Ill_Krunchall_4532:HG2_Ill_svaba_4067:HG3_Ill_150bpfermikitraw_4252:HG3_Ill_250bpfermikitraw_4386:HG3_Ill_Krunchall_4519:HG3_Ill_svaba_4188:HG4_Ill_svaba_4159;NumExactMatchSVs=9;ClusterMaxShiftDist=0.251852;ClusterMaxSizeDiff=0.251852;ClusterMaxEditDist=0.283465;PBcalls=9;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=0;DistForward=40358;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=3:54512668-54512710;PctSeqSimilarity=0.9853;PctSizeSimilarity=1;PctRecOverlap=0.9851;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=3642.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:69:1/1:4:25:3:24:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr3	54553047	HG3_Ill_GATKHCSBGrefine_2187	G	GTGCCACCTGCACACAGAAGGCATGGTGACGAACATGCTCTGTGCATGTCTGCCTGCAGGGAGGGGCCTCTAGGTGCCAACTGTCA	20	PASS	ClusterIDs=HG3_PB_pbsv_3233:HG4_PB_pbsv_3300:HG4_PB_HySA_4917:HG2_PB_HySA_6182:HG4_Ill_Krunchall_4744:HG4_Ill_GATKHC_5420:HG4_Ill_GATKHCSBGrefine_2283:HG4_Ill_250bpfermikitraw_4520:HG4_PB_SVrefine2Falcon1Dovetail_1991:HG3_PB_SVrefine2Falcon1Dovetail_2046:HG3_PB_HySA_5046:HG3_Ill_SVrefine2DISCOVARDovetail_2447:HG3_Ill_Krunchall_4520:HG3_Ill_GATKHC_5444:HG3_Ill_GATKHCSBGrefine_2187:HG3_Ill_250bpfermikitraw_4387:HG2_Ill_SVrefine2DISCOVARplusDovetail_8526:HG2_Ill_Krunchall_4533:HG2_Ill_GATKHC_5343:HG2_Ill_GATKHCSBGrefine_2192:HG2_Ill_250bpfermikitraw_4463:HG2_PB_pbsv_3286;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4463:HG2_Ill_GATKHCSBGrefine_2192:HG2_Ill_GATKHC_5343:HG2_Ill_Krunchall_4533:HG2_Ill_SVrefine2DISCOVARplusDovetail_8526:HG3_Ill_250bpfermikitraw_4387:HG3_Ill_GATKHCSBGrefine_2187:HG3_Ill_GATKHC_5444:HG3_Ill_Krunchall_4520:HG3_Ill_SVrefine2DISCOVARDovetail_2447;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0681818;ClusterMaxSizeDiff=0.0681818;ClusterMaxEditDist=0.214689;PBcalls=8;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=85;DistBack=40358;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=84;REFWIDENED=3:54553048-54553131;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3643.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:24:1|0:0:16:10:1:./.:0:0:0:0:0/1:25:24:./.:.:.:.:.:.
chr3	55004494	HG2_PB_PB10Xdip_20812	G	GTTCCTCACCCCTCTCCTCCCTTCCCCTCCCCTCCCCTCCTTCCTCTCCTTTCTTCTCCTCTCCTCCCCTCCCTTCCTCACCCCTCTCCTCCCTTCCCCTCCCCTCCCCTCCTCTCCTCTCCTTTCTTCTCTCCTCCCCTCCCTTCCTCACCCCTCTCCTCCCTTCCTCACCCCTCTCCTCCCTTCCCCTCCCCTTCCCTCCCCTCCTCTCCCCTCCTCTCTTCCCCTCCCTTCTTCACCCCTCTCCTCCCTTCCTGTCCCCTCCTCTCCCCCGCCTCCCCTCCTCTCCTTTCTTCTCCTCTCCTCCCCTCCCTTCCTCACCCCTCTCCTCCCTTCCCCTCCCCTCCCCTCCTCTCCCCTCCCCTCCTCTCCTATCCTTTCTTCTCCTCTCCTCCCCTCCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2048:HG2_PB_HySA_6189:HG2_PB_PB10Xdip_20813:HG2_PB_PB10Xdip_20812:HG2_PB_SVrefine2Falcon1plusDovetail_7988:HG2_PB_SVrefine2PBcRplusDovetail_7399:HG2_PB_SVrefine2PB10Xhap12_2418:HG4_PB_SVrefine2PBcRDovetail_1719:HG2_PB_pbsv_3288:HG2_PB_SVrefine2Falcon2Bionano_1497:HG3_PB_pbsv_3235:HG4_PB_SVrefine2Falcon1Dovetail_1992:HG4_PB_pbsv_3301;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_20812:HG2_PB_PB10Xdip_20813;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.063857;ClusterMaxEditDist=0.251244;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=400;DistBack=10;DistForward=41;DistMin=10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=159;REFWIDENED=3:55004477-55004635;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9975;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3644.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:1:26:1:23:./.:0:0:0:0:./.:0:2:1/1:2:28:.:.:.
chr3	55788567	HG2_PB_SVrefine2Falcon1plusDovetail_7990	T	TAAATATGAATTTAGGAAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCTGACCCCGAGCAGCCTAACTGGGAGGCACCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCGAATTCTACCAGAGGTACAAGGAGGAACTGGTAACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATAATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAATAAATAAATAAATAAATAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20816:HG2_PB_pbsv_3292:HG2_PB_assemblyticsfalcon_17611:HG3_PB_assemblyticsfalcon_17526:HG2_Ill_breakscan11_3317:HG3_PB_SVrefine2Falcon1Dovetail_2049:HG2_PB_SVrefine2Falcon2Bionano_1500:HG2_PB_SVrefine2PB10Xhap12_2420:HG2_PB_SVrefine2Falcon1plusDovetail_7990:HG2_PB_HySA_6193;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7990;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0412673;ClusterMaxSizeDiff=0.0367181;ClusterMaxEditDist=0.100569;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=6060;DistBack=6090;DistForward=21639;DistMin=6090;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=3:55788568-55788580;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9972;PctRecOverlap=0.9974;SizeDiff=-17;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3645.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:54:0|1:33:0:0:42:./.:0:0:0:0:0/1:31:11:0/1:216:766:.:5909:.
chr3	55885216	HG2_Ill_MetaSV_3232	T	TTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTAGATAATGATTTTTTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1502:HG4_PB_assemblyticsfalcon_17227:HG4_PB_SVrefine2Falcon1Dovetail_1994:HG2_PB_pbsv_3293:HG3_PB_SVrefine2Falcon1Dovetail_2050:HG3_Ill_MetaSV_3394:HG3_PB_assemblyticsfalcon_17531:HG3_Ill_GATKHCSBGrefine_2193:HG2_Ill_MetaSV_3232:HG2_PB_assemblyticsfalcon_17615:HG2_PB_SVrefine2Falcon1plusDovetail_7992:HG3_PB_pbsv_3240;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_MetaSV_3232:HG3_Ill_GATKHCSBGrefine_2193;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0875;ClusterMaxSizeDiff=0.0875;ClusterMaxEditDist=0.239032;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=13;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:55885217-55885216;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:24:0|1:37:0:0:19:./.:0:0:0:0:0/1:37:6:0/1:7:32:.:.:.
chr3	56074608	HG2_Ill_SpiralSDKrefine_11034	C	CATATACATATACATGTATATGTATACATATACATATACATGTATATGTAT	20	PASS	ClusterIDs=HG3_PB_pbsv_3241:HG4_Ill_svaba_4185:HG2_PB_pbsv_3294:HG2_PB_HySA_6201:HG4_Ill_scalpel_3104:HG4_Ill_Krunchall_4761:HG4_Ill_GATKHC_5441:HG4_Ill_GATKHCSBGrefine_2290:HG4_Ill_FB_2999:HG4_Ill_250bpfermikitraw_4540:HG3_Ill_svaba_4208:HG2_Ill_svaba_4097:HG4_Ill_svaba_4184:HG4_Ill_GATKHC_5440:HG4_Ill_GATKHCSBGrefine_2289:HG4_Ill_FB_2998:HG4_Ill_250bpfermikitraw_4539:HG4_Ill_150bpfermikitraw_4335:HG3_Ill_svaba_4207:HG3_Ill_scalpel_3312:HG3_Ill_Spiral_3548:HG3_Ill_Krunchall_4538:HG3_Ill_GATKHC_5463:HG3_Ill_GATKHCSBGrefine_2194:HG3_Ill_FB_2971:HG3_Ill_250bpfermikitraw_4403:HG3_Ill_150bpfermikitraw_4271:HG2_PB_assemblyticsfalcon_17618:HG2_Ill_svaba_4096:HG2_Ill_scalpel_3187:HG2_Ill_SpiralSDKrefine_11034:HG2_Ill_Krunchall_4557:HG2_Ill_GATKHC_5368:HG2_Ill_GATKHCSBGrefine_2197:HG2_Ill_FB_2954:HG2_Ill_250bpfermikitraw_4487:HG2_Ill_150bpfermikitraw_4158:HG2_PB_PB10Xdip_20818:HG4_PB_pbsv_3307;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4158:HG2_Ill_250bpfermikitraw_4487:HG2_Ill_FB_2954:HG2_Ill_GATKHCSBGrefine_2197:HG2_Ill_GATKHC_5368:HG2_Ill_Krunchall_4557:HG2_Ill_SpiralSDKrefine_11034:HG2_Ill_scalpel_3187:HG2_Ill_svaba_4096:HG2_PB_assemblyticsfalcon_17618:HG3_Ill_150bpfermikitraw_4271:HG3_Ill_250bpfermikitraw_4403:HG3_Ill_FB_2971:HG3_Ill_GATKHCSBGrefine_2194:HG3_Ill_GATKHC_5463:HG3_Ill_Krunchall_4538:HG3_Ill_Spiral_3548:HG3_Ill_scalpel_3312:HG3_Ill_svaba_4207:HG4_Ill_150bpfermikitraw_4335:HG4_Ill_250bpfermikitraw_4539:HG4_Ill_FB_2998:HG4_Ill_GATKHCSBGrefine_2289:HG4_Ill_GATKHC_5440:HG4_Ill_svaba_4184;NumExactMatchSVs=25;ClusterMaxShiftDist=0.116505;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.259259;PBcalls=6;Illcalls=33;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=14;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=-109;DistForward=5;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=11;REFWIDENED=3:56074607-56074620;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:0:8:0:6:./.:0:0:0:0:1/1:1:46:./.:.:.:.:.:.
chr3	56765620	HG3_Ill_GATKHCSBGrefine_2197	C	CCGGGTTTTAAGTTTTCTTTTTTTTTTTTTTTTTTTTGGTGAAAGTTGCCATTAATTGTTTATTATCATTAAAAATAAATACATATGTTTCACTTCACATGTGTTACACAGGTGCTTAATATTTTATTAATATAAATGCATAATTCATTTGCTCTTCACAACCACAAAAACTAGATACATGATTATTCCCATTTTGCAGATAAGGAAACTAACACCCAAGTGAAATACTTTACCAAAGGTCACATAGGTAGTAAGTAACAACTGTGTGATCAGAGGAGAGCATTATCTCCAAACTTCGTGAGAGACACATATAAGCAATTAGTCCCTTACAGACTAAGAAATTTTGATACAGACAATTTGTTGCAGATTCATAAGATAGTACAGCCAGTTCTGTGAATCACAGTGTTATATTTATTTCCACATATTCTATGTTAATAATATAATTTTTAATTCCATGTATTTTAAGTTTTCATTCAATAACTGCTATAAGTATATGCAGCTCTGAGAACAAGGGGGAAGAGAATAATTTCAGCCATTTAAAAATAGCTTTTATATTTAGATTTAAATATTTCAGTTGCTTTTTTTTTTTTTTTTTTTTTTACTTT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3234:HG2_PB_pbsv_3298:HG3_PB_pbsv_3246:HG3_PB_assemblyticsfalcon_17539:HG4_PB_assemblyticsfalcon_17237:HG3_PB_HySA_5072:HG3_Ill_MetaSV_3396:HG3_Ill_GATKHCSBGrefine_2197:HG2_10X_SVrefine210Xhap12_2477:HG2_PB_SVrefine2Falcon2Bionano_1505:HG2_PB_SVrefine2Falcon1plusDovetail_7995:HG3_PB_SVrefine2Falcon1Dovetail_2053:HG4_PB_SVrefine2Falcon1Dovetail_1998;NumClusterSVs=13;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_2197:HG3_Ill_MetaSV_3396;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0946058;ClusterMaxSizeDiff=0.0946058;ClusterMaxEditDist=0.192531;PBcalls=9;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=604;DistBack=-1;DistForward=17;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=3:56765621-56765638;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:52:0|1:24:1:0:28:./.:0:0:0:0:0/1:40:9:0/1:10:46:.:.:.
chr3	57524050	HG2_Ill_250bpfermikitraw_4510	A	AGTGAGATTATAAACAGGCCGGGTACAGTGGCTCCCAGCACTTTGGGAGGCCAAGGCAGGTAGATCACTATAATCACCTG	20	PASS	ClusterIDs=HG4_PB_pbsv_3311:HG4_Ill_Krunchall_4780:HG4_Ill_svaba_4202:HG3_Ill_svaba_4230:HG2_Ill_svaba_4119:HG3_PB_HySA_5079:HG2_PB_HySA_6221:HG4_Ill_250bpfermikitraw_4557:HG4_Ill_150bpfermikitraw_4351:HG3_Ill_250bpfermikitraw_4428:HG3_Ill_150bpfermikitraw_4289:HG2_Ill_250bpfermikitraw_4510:HG2_Ill_150bpfermikitraw_4177:HG4_Ill_manta_795:HG2_PB_PB10Xdip_20829:HG2_PB_PB10Xdip_20828:HG2_Ill_manta_921:HG3_Ill_Krunchall_4558:HG2_Ill_Krunchall_4578:HG3_Ill_Spiral_3565:HG2_Ill_SpiralSDKrefine_11050:HG2_PB_pbsv_3300:HG3_PB_pbsv_3248;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4177:HG2_Ill_250bpfermikitraw_4510:HG3_Ill_150bpfermikitraw_4289:HG3_Ill_250bpfermikitraw_4428:HG4_Ill_150bpfermikitraw_4351:HG4_Ill_250bpfermikitraw_4557;NumExactMatchSVs=6;ClusterMaxShiftDist=0.197531;ClusterMaxSizeDiff=0.197531;ClusterMaxEditDist=0.366013;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=79;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:57524049-57524051;PctSeqSimilarity=0.9878;PctSizeSimilarity=0.9753;PctRecOverlap=0.9753;SizeDiff=-2;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=97;MatchId=3651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:41:./.:4:4:0:7:./.:0:0:0:0:1/1:0:45:./.:.:.:.:.:.
chr3	57984306	HG2_PB_SVrefine2PBcRplusDovetail_7403	G	GAAAGAAAGAAGAAAAGCAAAAGTTGGCCGGGCGGGTGGCTCACGCCTGTAATCCAGCACTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCGGCTAAAACGGTGAAACCGTCTCTACTAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCACTGCACTCCAGCCTGGGCGACAGAGCGAGACCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_1726:HG2_PB_pbsv_3303:HG3_PB_assemblyticsfalcon_17553:HG3_PB_SVrefine2Falcon1Dovetail_2058:HG2_Ill_breakscan11_3318:HG2_PB_HySA_6222:HG2_PB_SVrefine2PB10Xhap12_2426:HG2_PB_SVrefine2PBcRplusDovetail_7403:HG2_PB_assemblyticsfalcon_17636:HG4_PB_assemblyticsfalcon_17245:HG2_PB_SVrefine2Falcon2Bionano_1507:HG2_PB_SVrefine2Falcon1plusDovetail_7997:HG4_PB_SVrefine2Falcon1Dovetail_2001;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7403;NumExactMatchSVs=1;ClusterMaxShiftDist=0.170807;ClusterMaxSizeDiff=0.170807;ClusterMaxEditDist=0.271812;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=54017;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=3:57984307-57984332;PctSeqSimilarity=0.9731;PctSizeSimilarity=0.952;PctRecOverlap=0.952;SizeDiff=-16;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=95;MatchId=3652.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:38:0|1:20:5:3:23:./.:0:0:0:0:./.:43:4:0/1:10:10:.:.:.
chr3	59514810	HG2_Ill_SVrefine2DISCOVARplusDovetail_8540	G	GTCTCTGTCGTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCCCACTCCCCCCCTCCCCTTCTCTCCCCCTCCCCCTCTCCCCCCTCCCCCTCCCTCCCTCTCCATGTACAAGGGTAGCTGTTTACAAGCCAGGAAGAGAGGCACTCTTACTTGCTCACACTCTTGCTTGCTCGCTCTCTCTCCCTCTCTTTCCCTCTCTCTCTCCCTTCCTCTCTCTCCCTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8540:HG3_PB_assemblyticsfalcon_17559:HG2_PB_HySA_6227:HG2_PB_pbsv_3305:HG3_PB_HySA_5086:HG2_PB_PB10Xdip_20833:HG2_PB_PB10Xdip_20832:HG4_PB_pbsv_3317:HG2_Ill_MetaSV_3235:HG3_PB_pbsv_3252:HG4_PB_HySA_4945:HG3_PB_HySA_5085:HG2_PB_HySA_6226:HG2_10X_SVrefine210Xhap12_2488:HG2_PB_SVrefine2Falcon1plusDovetail_7999:HG4_PB_SVrefine2PBcRDovetail_1727:HG4_PB_SVrefine2Falcon1Dovetail_2002:HG3_PB_SVrefine2Falcon1Dovetail_2059:HG3_Ill_SVrefine2DISCOVARDovetail_2467:HG2_PB_SVrefine2PBcRplusDovetail_7405:HG2_PB_SVrefine2PB10Xhap12_2428:HG4_Ill_SVrefine2DISCOVARDovetail_2480:HG2_PB_SVrefine2Falcon2Bionano_1509;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8540:HG4_Ill_SVrefine2DISCOVARDovetail_2480:HG2_PB_SVrefine2Falcon2Bionano_1509;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0956341;ClusterMaxSizeDiff=0.0790021;ClusterMaxEditDist=0.265306;PBcalls=18;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=236;DistBack=21628;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=3:59514811-59514879;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.9915;PctRecOverlap=0.7679;SizeDiff=2;StartDistance=-54;EndDistance=-54;GTMatch=0;TruScore=91;MatchId=3653.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:1/1:1:32:1:21:./.:0:0:0:0:1/1:0:10:./.:.:.:.:.:.
chr3	59852889	HG2_Ill_MetaSV_3236	T	TAATCAGCAGAACCAAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3319:HG2_PB_pbsv_3308:HG4_PB_assemblyticsfalcon_17254:HG4_PB_pbsv_3320:HG3_PB_assemblyticsfalcon_17563:HG2_PB_HySA_6235:HG3_PB_pbsv_3255:HG3_PB_SVrefine2Falcon1Dovetail_2061:HG3_Ill_MetaSV_3397:HG2_Ill_MetaSV_3236:HG4_Ill_MetaSV_3374:HG2_PB_SVrefine2Falcon1plusDovetail_8001:HG3_PB_HySA_5095:HG2_PB_HySA_6234:HG4_PB_SVrefine2Falcon1Dovetail_2004;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_MetaSV_3236:HG3_Ill_MetaSV_3397;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0770416;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.22907;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=951;DistBack=60453;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:59852890-59852903;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3654.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:39:0|1:49:0:0:28:./.:0:0:0:0:0/1:22:19:0/1:32:100:.:.:.
chr3	59894561	HG2_Ill_GATKHCSBGrefine_2210	G	GAACATTTCATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3320:HG2_PB_pbsv_3309:HG3_PB_pbsv_3256:HG3_Ill_GATKHCSBGrefine_2204:HG2_PB_SVrefine2Falcon2Bionano_1511:HG2_Ill_MetaSV_3237:HG2_Ill_GATKHCSBGrefine_2210:HG2_PB_HySA_6236;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2210:HG2_Ill_MetaSV_3237:HG2_PB_SVrefine2Falcon2Bionano_1511:HG3_Ill_GATKHCSBGrefine_2204;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0595745;ClusterMaxSizeDiff=0.0508475;ClusterMaxEditDist=0.174274;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=115;DistBack=0;DistForward=41744;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:59894562-59894576;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3655.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:24:./.:8:15:19:3:./.:0:0:0:0:0/1:27:5:./.:.:.:.:.:.
chr3	60537216	HG2_PB_SVrefine2Falcon2Bionano_1513	T	TAGGGGAGAGGGGAGGGGGAAGAGGTGAGATGGGAGGGGGGAGGAGGGGAGATGGGAGGGGGGAGGAGGGGAGGGGAGGGGAGGAGGGGAGGGGAGGGGAGGAGGGGAGGGGAGGGGAAGAAGGGGAGGGGAGGAGGGGAGGGGAGGGGAAGAAGGGGAGGGGAGGAGGGGAGGGGAGGGGAAGAAGGGGAGGGGAGGAGGGGAGGGGAGGGGAAGAAGGGGAGGGGAGGAGGGGAGGGGAGGGGAAGAAGGGGAGGGGAGGAGGGGAGGGGAGGGGAAGAAGGGGAGGGGAGGAGGGGAGGGGAGGGGAAGAAGGGGAGGGGAGGAGGGGAGGGGAAGGGGAGGGGAGAGGAGGGGGAGGGGAAGAGGGGAGGAGAGGGGAGGGGAGGAGGGGAGGGGGAGGGGGGAGGAGGGGAGGGAGGGGAGGGGGAGGGGGGAGGAGGGGAGGAGGGGGGAGGGGGAGGGGGAGGGGAGGGGGAGGGGAGGGGGGGAGGGGAGGGGGAGGAGGGGAGGGGGAGGGGGAGGGAGGGGAGGGGGAGGAGGGAGGGAGGGAGGGGAGGGGGAGGAGGGGAGGAGGGGGAGGGGAGGGGAGGGGAGGGGGAGGGAGGGGGAGGAGGGGAGGGGAGGGGAGGAGGGGGGAGGAGGGGAGGGAGGGGAGGGGAGGGGGGAGGAGGGGAGGGGGAGGAGGGGGAGGGGAGGAGGGGGAGGAGGGGGGAGGAGGGGAGGAGGGGGAGGAGGGGGGGAGGGGGAGGAGGGGGGGAGGAGGGGGAGGAGGGGAGGGGAGGGGGAGGAGGGGAGGGGAGGGGGGAGGAGGGGAGGAGGGGGGAGGAGGGGAGGAGGGGGAGGAGGGGAGGAGGGGGGAGGGGAGGAGGGAGGGAGGGGGAGGGAGGAGGAGGAGGAGGGGAGGGAGGGGAGGGGGAGGAGGGAGGGGAGGGGAGGAGGGGAGGGGAGGAGGGGAGGGGAGGGAGGAGGAGGGGAGGGGGAGGAGGGGGAGGAGGGGAGGGGGAGGAGGAGAGGGAGGGGGAGGGAGGGGAGGGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2433:HG3_PB_SVrefine2Falcon1Dovetail_2063:HG2_PB_SVrefine2Falcon2Bionano_1513:HG4_PB_SVrefine2Falcon1Dovetail_2006:HG2_PB_SVrefine2Falcon1plusDovetail_8004:HG2_PB_SVrefine2PB10Xhap12_2434:HG2_PB_SVrefine2PBcRplusDovetail_7409:HG2_PB_pbsv_3313;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1513;NumExactMatchSVs=1;ClusterMaxShiftDist=0.200393;ClusterMaxSizeDiff=0.200393;ClusterMaxEditDist=0.274297;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1039;DistBack=-118;DistForward=-1;DistMin=-118;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=112;REFWIDENED=3:60537217-60537328;PctSeqSimilarity=0.9218;PctSizeSimilarity=0.9293;PctRecOverlap=0.8838;SizeDiff=-79;StartDistance=-90;EndDistance=-90;GTMatch=1;TruScore=91;MatchId=3656.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:53:1/1:3:25:2:11:./.:0:0:0:0:./.:0:0:0/1:18:35:.:1129:.
chr3	60941286	HG3_Ill_250bpfermikitraw_4451	A	ATATACATATATATATATACGTATATATATATATATACATATATATATACATG	20	PASS	ClusterIDs=HG2_Ill_manta_927:HG3_PB_assemblyticsfalcon_17572:HG3_Ill_svaba_4246:HG3_Ill_250bpfermikitraw_4451:HG3_Ill_150bpfermikitraw_4312:HG4_PB_assemblyticsfalcon_17263:HG3_Ill_Spiral_3588;NumClusterSVs=7;ExactMatchIDs=HG3_Ill_150bpfermikitraw_4312:HG3_Ill_250bpfermikitraw_4451:HG3_Ill_svaba_4246;NumExactMatchSVs=3;ClusterMaxShiftDist=0.130841;ClusterMaxSizeDiff=0.130841;ClusterMaxEditDist=0.130841;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=45;REFWIDENED=3:60941260-60941304;PctSeqSimilarity=0.8833;PctSizeSimilarity=0.7879;PctRecOverlap=0.791;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=82;MatchId=3657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:34:./.:25:11:1:19:./.:0:0:0:0:0/1:28:11:./.:.:.:.:.:.
chr3	61657416	HG2_PB_SVrefine2PB10Xhap12_2438	G	GGACGGGGCGGCTGGCTGGGTGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCTGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2066:HG2_PB_SVrefine2Falcon1plusDovetail_8007:HG3_PB_pbsv_3265:HG2_PB_SVrefine2PBcRplusDovetail_7412:HG2_PB_pbsv_3319:HG2_PB_SVrefine2PB10Xhap12_2438:HG2_PB_SVrefine2Falcon2Bionano_1515:HG2_Ill_GATKHCSBGrefine_2216:HG2_PB_PB10Xdip_20846:HG2_PB_PB10Xdip_20845:HG4_PB_SVrefine2PBcRDovetail_1733:HG4_PB_SVrefine2Falcon1Dovetail_2008:HG4_PB_pbsv_3327;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2216:HG2_PB_SVrefine2Falcon2Bionano_1515:HG2_PB_SVrefine2PB10Xhap12_2438:HG2_PB_SVrefine2PBcRplusDovetail_7412;NumExactMatchSVs=4;ClusterMaxShiftDist=0.11413;ClusterMaxSizeDiff=0.108696;ClusterMaxEditDist=0.297872;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=178;DistBack=0;DistForward=64;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=160;REFWIDENED=3:61657333-61657492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3658.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:0:25:0:18:./.:0:0:0:0:1/1:1:19:./.:.:.:.:.:.
chr3	61871354	HG2_PB_PB10Xdip_20849	T	TCCTCTCCTCTCCTCTCCTCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCTCTCCTCTCCTCTCCTCTGCTCCCCTCTCCTCCCCCCCCCTCCCCTCCCCTCCTGTCCCCCTCCCCTCTCCCCTCCCCCTCCCCCTCCCCTCCCCTCCCCTCCCCCTCCCCTCCCCCTCCCTCCTCCCTCCTCCCCTCC	10	PASS	ClusterIDs=HG2_PB_pbsv_3321:HG2_PB_HySA_6256:HG3_PB_HySA_5119:HG2_PB_HySA_6255:HG3_PB_SVrefine2Falcon1Dovetail_2069:HG2_PB_PB10Xdip_20850:HG2_PB_PB10Xdip_20849:HG2_PB_SVrefine2Falcon2Bionano_1516:HG4_PB_SVrefine2PBcRDovetail_1735:HG2_PB_SVrefine2PB10Xhap12_2440:HG2_PB_SVrefine2Falcon1plusDovetail_8008:HG2_PB_SVrefine2PBcRplusDovetail_7413:HG2_PB_SVrefine2PB10Xhap12_2439:HG4_PB_SVrefine2Falcon1Dovetail_2009;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_20849;NumExactMatchSVs=1;ClusterMaxShiftDist=0.258065;ClusterMaxSizeDiff=0.258065;ClusterMaxEditDist=0.271889;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=188;DistBack=-21;DistForward=9;DistMin=-21;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=3:61871338-61871373;PctSeqSimilarity=0.9216;PctSizeSimilarity=0.8624;PctRecOverlap=0.863;SizeDiff=-30;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=88;MatchId=3659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:4:37:1:21:./.:0:0:0:0:./.:2:1:./.:.:.:.:.:.
chr3	63225049	HG2_Ill_GATKHCSBGrefine_2221	T	TGTCAAGTGTGTTATGCACCTACCCTACCATTGTCACCAATCCTACCATTGCCCAGTGTGTCACACACACACACCTTACCATGAGTGCATGGTGGGATAGGTGCATGACACACCTGACAATGGTGGAATGAGTGACAATGGTAGGATATCTGCACCATCCTACCATTGTCACCCATCCTACCATTGTCAGGTGTGTCATGCACCCATCCTACCATTGTCACCCATCCTATCATC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8010:HG3_Ill_GATKHCSBGrefine_2212:HG3_PB_pbsv_3270:HG2_Ill_GATKHCSBGrefine_2221:HG3_PB_HySA_5125:HG2_PB_pbsv_3324:HG3_Ill_SVrefine2DISCOVARDovetail_2477:HG2_PB_SVrefine2Falcon2Bionano_1518:HG3_PB_SVrefine2Falcon1Dovetail_2071;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2221:HG3_Ill_GATKHCSBGrefine_2212;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0901639;ClusterMaxEditDist=0.254545;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=233;DistBack=-122;DistForward=-1;DistMin=-122;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=364;REFWIDENED=3:63224965-63225328;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3661.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:22:0|1:26:2:2:17:./.:0:0:0:0:0/1:23:13:./.:.:.:.:.:.
chr3	63540965	HG2_PB_pbsv_3328	T	TTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACGGAGGTCTCGCTCTTGTCAGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAAAATCTCGGCTCACTGCAAGCTCCCTTTCCGGGTTCAACGCCTTCTCCCTGCCTCACCTCCGCAGTAGCTGGACACAGGCGCCCGCCACCGCGGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCGACCTCCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGAATTACAGGCTGTGAGCCACGCGCCCGGCCAGAAAAAAACACTTACC	10	PASS	ClusterIDs=HG4_PB_HySA_4977:HG2_PB_pbsv_3328:HG2_PB_HySA_6274:HG4_PB_assemblyticsfalcon_17277:HG4_PB_pbsv_3336:HG2_PB_SVrefine2Falcon1plusDovetail_8013:HG4_PB_SVrefine2Falcon1Dovetail_2012:HG2_PB_SVrefine2Falcon2Bionano_1521;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_3328;NumExactMatchSVs=1;ClusterMaxShiftDist=0.136827;ClusterMaxSizeDiff=0.136827;ClusterMaxEditDist=0.183406;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=349;DistBack=0;DistForward=26109;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:63540966-63540965;PctSeqSimilarity=0.9574;PctSizeSimilarity=0.9914;PctRecOverlap=0.9542;SizeDiff=3;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=96;MatchId=3662.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:58:36:0|1:54:1:2:31:./.:0:0:0:0:0/1:28:10:0/1:13:14:.:.:.
chr3	63725720	HG2_Ill_Krunchall_4618	A	AAGAGGGAAACTTGACAGATACATAAAGGGAAAAGAGTTATGAAGGGGGAGACTGAGATT	20	PASS	ClusterIDs=HG3_PB_HySA_5127:HG4_PB_pbsv_3338:HG2_PB_pbsv_3329:HG3_PB_pbsv_3273:HG2_PB_HySA_6275:HG2_PB_PB10Xdip_20857:HG2_PB_PB10Xdip_20856:HG4_PB_assemblyticsfalcon_17279:HG4_Ill_Krunchall_4821:HG4_Ill_GATKHC_5513:HG4_Ill_GATKHCSBGrefine_2307:HG4_Ill_250bpfermikitraw_4603:HG4_Ill_150bpfermikitraw_4392:HG3_Ill_manta_740:HG3_Ill_Krunchall_4595:HG3_Ill_GATKHC_5530:HG3_Ill_GATKHCSBGrefine_2215:HG3_Ill_250bpfermikitraw_4465:HG3_Ill_150bpfermikitraw_4325:HG2_Ill_manta_932:HG2_Ill_Krunchall_4618:HG2_Ill_GATKHC_5438:HG2_Ill_GATKHCSBGrefine_2224:HG2_Ill_250bpfermikitraw_4553:HG2_Ill_150bpfermikitraw_4220:HG4_PB_HySA_4978;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4220:HG2_Ill_250bpfermikitraw_4553:HG2_Ill_GATKHCSBGrefine_2224:HG2_Ill_GATKHC_5438:HG2_Ill_Krunchall_4618:HG2_Ill_manta_932:HG3_Ill_150bpfermikitraw_4325:HG3_Ill_250bpfermikitraw_4465:HG3_Ill_GATKHCSBGrefine_2215:HG3_Ill_GATKHC_5530:HG3_Ill_Krunchall_4595:HG3_Ill_manta_740:HG4_Ill_150bpfermikitraw_4392:HG4_Ill_250bpfermikitraw_4603:HG4_Ill_GATKHCSBGrefine_2307:HG4_Ill_GATKHC_5513:HG4_Ill_Krunchall_4821;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.16129;PBcalls=9;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=0;DistForward=16637;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=3:63725721-63725786;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:53:1/1:3:16:1:17:./.:0:0:0:0:1/1:1:51:./.:.:.:.:.:.
chr3	65255107	HG4_Ill_scalpel_3155	A	AGATGATACTCAGAGCAGTGAGACACAGTCAAAGGACTAGCAAGTTAAAAG	20	PASS	ClusterIDs=HG2_PB_HySA_6291:HG4_PB_pbsv_3344:HG3_PB_pbsv_3276:HG3_PB_HySA_5136:HG2_Ill_breakscan11_3321:HG4_PB_assemblyticsfalcon_17284:HG4_Ill_svaba_4248:HG4_Ill_scalpel_3155:HG4_Ill_Krunchall_4833:HG4_Ill_GATKHC_5528:HG4_Ill_GATKHCSBGrefine_2310:HG4_Ill_FB_3040:HG4_Ill_Cortex_2365:HG4_Ill_250bpfermikitraw_4613:HG4_Ill_150bpfermikitraw_4402:HG3_Ill_svaba_4266:HG3_Ill_Spiral_3606:HG3_Ill_Krunchall_4609:HG3_Ill_GATKHC_5544:HG3_Ill_GATKHCSBGrefine_2219:HG3_Ill_Cortex_2401:HG3_Ill_250bpfermikitraw_4478:HG3_Ill_150bpfermikitraw_4334:HG2_Ill_svaba_4160:HG2_Ill_SpiralSDKrefine_11086:HG2_Ill_Krunchall_4630:HG2_Ill_GATKHC_5453:HG2_Ill_GATKHCSBGrefine_2228:HG2_Ill_Cortex_5585:HG2_Ill_250bpfermikitraw_4565:HG2_Ill_150bpfermikitraw_4231:HG4_PB_HySA_4985;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4231:HG2_Ill_250bpfermikitraw_4565:HG2_Ill_Cortex_5585:HG2_Ill_GATKHCSBGrefine_2228:HG2_Ill_GATKHC_5453:HG2_Ill_Krunchall_4630:HG2_Ill_SpiralSDKrefine_11086:HG2_Ill_svaba_4160:HG3_Ill_150bpfermikitraw_4334:HG3_Ill_250bpfermikitraw_4478:HG3_Ill_Cortex_2401:HG3_Ill_GATKHCSBGrefine_2219:HG3_Ill_GATKHC_5544:HG3_Ill_Krunchall_4609:HG3_Ill_Spiral_3606:HG3_Ill_svaba_4266:HG4_Ill_150bpfermikitraw_4402:HG4_Ill_250bpfermikitraw_4613:HG4_Ill_Cortex_2365:HG4_Ill_FB_3040:HG4_Ill_GATKHCSBGrefine_2310:HG4_Ill_GATKHC_5528:HG4_Ill_Krunchall_4833:HG4_Ill_scalpel_3155:HG4_Ill_svaba_4248:HG4_PB_assemblyticsfalcon_17284;NumExactMatchSVs=26;ClusterMaxShiftDist=0.114286;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.166667;PBcalls=6;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=0;DistForward=4678;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:65255106-65255108;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3665.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:27:0|1:24:3:2:21:./.:0:0:0:0:0/1:21:30:./.:.:.:.:.:.
chr3	65595659	HG3_Ill_GATKHCSBGrefine_2221	A	AATAGACCATTCTGAGGTAGAAGGAAAGGAAGGAAAGAGAGAAGGGGAAGGAACTGGGAGAAGAGAAGGGGAGAGGGAGAGAGGAAGGGAAAGAG	20	PASS	ClusterIDs=HG4_PB_HySA_4988:HG3_PB_HySA_5140:HG3_PB_pbsv_3278:HG2_Ill_breakscan11_3322:HG2_PB_PB10Xdip_20860:HG2_PB_PB10Xdip_20861:HG4_Ill_svaba_4252:HG4_Ill_manta_801:HG4_Ill_Krunchall_4839:HG4_Ill_GATKHCSBGrefine_2311:HG4_Ill_Cortex_2366:HG4_Ill_250bpfermikitraw_4617:HG4_Ill_150bpfermikitraw_4407:HG3_Ill_svaba_4269:HG3_Ill_manta_742:HG3_Ill_Spiral_3610:HG3_Ill_SVrefine2DISCOVARDovetail_2487:HG3_Ill_Krunchall_4614:HG3_Ill_GATKHCSBGrefine_2221:HG3_Ill_Cortex_2403:HG3_Ill_250bpfermikitraw_4484:HG3_Ill_150bpfermikitraw_4338:HG2_Ill_svaba_4163:HG2_Ill_manta_935:HG2_Ill_SpiralSDKrefine_11090:HG2_Ill_Krunchall_4636:HG2_Ill_GATKHCSBGrefine_2230:HG2_Ill_Cortex_5587:HG2_Ill_250bpfermikitraw_4571:HG2_10X_SVrefine210Xhap12_2506:HG2_PB_SVrefine2Falcon1plusDovetail_8016:HG2_PB_HySA_6296:HG2_PB_pbsv_3334:HG4_PB_pbsv_3346;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2506:HG2_Ill_250bpfermikitraw_4571:HG2_Ill_Cortex_5587:HG2_Ill_GATKHCSBGrefine_2230:HG2_Ill_Krunchall_4636:HG2_Ill_SpiralSDKrefine_11090:HG2_Ill_manta_935:HG2_Ill_svaba_4163:HG3_Ill_150bpfermikitraw_4338:HG3_Ill_250bpfermikitraw_4484:HG3_Ill_Cortex_2403:HG3_Ill_GATKHCSBGrefine_2221:HG3_Ill_Krunchall_4614:HG3_Ill_SVrefine2DISCOVARDovetail_2487:HG3_Ill_Spiral_3610:HG3_Ill_manta_742:HG3_Ill_svaba_4269:HG4_Ill_150bpfermikitraw_4407:HG4_Ill_250bpfermikitraw_4617:HG4_Ill_Cortex_2366:HG4_Ill_GATKHCSBGrefine_2311:HG4_Ill_Krunchall_4839:HG4_Ill_manta_801:HG4_Ill_svaba_4252;NumExactMatchSVs=24;ClusterMaxShiftDist=0.25731;ClusterMaxSizeDiff=0.255814;ClusterMaxEditDist=0.313953;PBcalls=9;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=94;DistBack=6;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:65595660-65595660;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3667.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:17:54:0|1:16:5:0:44:./.:0:0:0:0:0/1:25:15:./.:.:.:.:.:.
chr3	65841314	HG4_PB_SVrefine2Falcon1Dovetail_2015	AGA	GGAGGAGAGAGGGGAGGGGACAGGGAGGGGAAAGGGGAGGGTAGAGGGCAGGAGAGAGTGAAGGGGAGGGAGGGGAAGAGGGGAGGGGAGAGGGGAGGGGAGAAGGGGAGGGGAGAGGGGGGAGAGGGGAGGGGACAGGGGAGGAGGGGAGGGAGGGAGGGGGGGGAAGGGAGAGGGGAGGGGAGAGGGAGGGGAGAGGGGAGGGGAGAGGGGAGGAGAAGGGAGGGAGAGGGAGGGGAGAGGGGAGGGGAGAGGGAGAGGGGAGAGGAAGGGAGAGGGAGAGAGGGAGGAGAGGAGGGGAGAGGGGAGGGGAGAGGGGAGGAGAGGGGGAGGGAGAGGGGAGGGGAGAGGGGGAAGGGGGAAAGGGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7419:HG4_PB_assemblyticsfalcon_17289:HG4_PB_SVrefine2Falcon1Dovetail_2015:HG2_PB_HySA_6300:HG4_PB_pbsv_3347:HG2_PB_HySA_6299:HG2_PB_PB10Xdip_20863:HG2_PB_PB10Xdip_20862:HG3_PB_pbsv_3280:HG2_PB_SVrefine2Falcon2Bionano_1525:HG2_PB_SVrefine2PB10Xhap12_2450:HG2_PB_SVrefine2Falcon1plusDovetail_8017:HG3_PB_SVrefine2Falcon1Dovetail_2075:HG3_PB_assemblyticsfalcon_17595:HG2_PB_pbsv_3336;NumClusterSVs=15;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_2015:HG4_PB_assemblyticsfalcon_17289;NumExactMatchSVs=2;ClusterMaxShiftDist=0.357473;ClusterMaxSizeDiff=0.357473;ClusterMaxEditDist=0.380805;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=366;DistBack=18;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:65841317-65841313;PctSeqSimilarity=0.952;PctSizeSimilarity=0.9606;PctRecOverlap=0.9318;SizeDiff=-15;StartDistance=19;EndDistance=21;GTMatch=1;TruScore=94;MatchId=3668.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:54:1/1:2:22:3:22:./.:0:0:0:0:0/1:5:11:0/1:6:11:.:.:.
chr3	66965903	HG3_Ill_250bpfermikitraw_4500	C	CTTATCAGTAATTATACTAATTACTAAGTATAATTATCAGTAATTATACTAATTACTAAGTATAA	20	PASS	ClusterIDs=HG2_PB_HySA_6321:HG4_PB_pbsv_3357:HG2_PB_HySA_6322:HG3_PB_pbsv_3292:HG4_Ill_svaba_4262:HG2_PB_pbsv_3346:HG4_Ill_Krunchall_4852:HG4_Ill_250bpfermikitraw_4631:HG4_Ill_150bpfermikitraw_4419:HG3_PB_SVrefine2Falcon1Dovetail_2083:HG3_Ill_svaba_4286:HG3_Ill_Krunchall_4627:HG3_Ill_250bpfermikitraw_4500:HG3_Ill_150bpfermikitraw_4356:HG2_PB_SVrefine2Falcon1plusDovetail_8023:HG2_Ill_svaba_4176:HG2_Ill_SVrefine2DISCOVARplusDovetail_8571:HG2_Ill_Krunchall_4650:HG2_Ill_250bpfermikitraw_4585:HG2_Ill_150bpfermikitraw_4247;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4247:HG2_Ill_250bpfermikitraw_4585:HG2_Ill_Krunchall_4650:HG2_Ill_SVrefine2DISCOVARplusDovetail_8571:HG2_Ill_svaba_4176:HG2_PB_SVrefine2Falcon1plusDovetail_8023:HG3_Ill_150bpfermikitraw_4356:HG3_Ill_250bpfermikitraw_4500:HG3_Ill_Krunchall_4627:HG3_Ill_svaba_4286:HG3_PB_SVrefine2Falcon1Dovetail_2083:HG4_Ill_150bpfermikitraw_4419:HG4_Ill_250bpfermikitraw_4631:HG4_Ill_Krunchall_4852:HG4_Ill_svaba_4262;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0888889;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.277372;PBcalls=7;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=5498;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=64;REFWIDENED=3:66965904-66965967;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:0|1:25:1:2:31:./.:0:0:0:0:0/1:22:27:./.:.:.:.:.:.
chr3	66967560	HG2_PB_PB10Xdip_20868	G	TAGAAAATGTGGAAGAAATGGATAAATTCTTTGACACATACACCAAAATGATAACGGGATATCACCACTGATCCACAGAAATAAAAACTACCATGAGAGAATAGTATAAACACCTCTACGCAAATAAACT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8024:HG2_Ill_SVrefine2DISCOVARplusDovetail_8572:HG2_PB_SVrefine2PBcRplusDovetail_7421:HG3_PB_SVrefine2Falcon1Dovetail_2084:HG2_PB_SVrefine2PB10Xhap12_2457:HG2_PB_PB10Xdip_20869:HG2_PB_PB10Xdip_20868:HG3_PB_HySA_5168:HG2_PB_pbsv_3347:HG4_PB_pbsv_3358:HG3_PB_pbsv_3293;NumClusterSVs=11;ExactMatchIDs=HG2_PB_PB10Xdip_20868:HG2_PB_PB10Xdip_20869:HG2_PB_SVrefine2PB10Xhap12_2457;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0875912;ClusterMaxSizeDiff=0.0597015;ClusterMaxEditDist=0.237037;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=129;DistBack=87;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=131;REFWIDENED=3:66967473-66967603;PctSeqSimilarity=0.9909;PctSizeSimilarity=0.9773;PctRecOverlap=0.3233;SizeDiff=-3;StartDistance=88;EndDistance=88;GTMatch=0;TruScore=76;MatchId=3670.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:41:0|1:20:3:1:30:./.:0:0:0:0:0/1:26:11:./.:.:.:.:.:.
chr3	66992107	HG3_Ill_GATKHC_5571	G	GATATCATATCTAGATATCTAGATATGATATCTAGATATCTAGATATGATATCTAGATATCTATATCATATCTAGATATCTAGATATCTAGATATCTAGATAACT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2511:HG2_PB_pbsv_3348:HG4_Ill_GATKHC_5548:HG4_PB_pbsv_3359:HG4_Ill_GATKHCSBGrefine_2317:HG3_Ill_manta_747:HG3_Ill_GATKHC_5571:HG3_Ill_GATKHCSBGrefine_2226:HG2_Ill_Krunchall_4651:HG2_Ill_GATKHC_5475:HG2_Ill_GATKHCSBGrefine_2235:HG3_PB_pbsv_3294:HG4_PB_SVrefine2PBcRDovetail_1744:HG4_Ill_SVrefine2DISCOVARDovetail_2510:HG2_PB_SVrefine2Falcon2Bionano_1529:HG2_Ill_SVrefine2DISCOVARplusDovetail_8573;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2235:HG2_Ill_GATKHC_5475:HG2_Ill_Krunchall_4651:HG3_Ill_GATKHCSBGrefine_2226:HG3_Ill_GATKHC_5571:HG3_Ill_manta_747:HG4_Ill_GATKHCSBGrefine_2317:HG4_Ill_GATKHC_5548;NumExactMatchSVs=8;ClusterMaxShiftDist=0.109091;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.316742;PBcalls=5;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=104;DistBack=0;DistForward=17;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=25;REFWIDENED=3:66992106-66992133;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3671.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:1|0:0:21:28:1:./.:0:0:0:0:0/1:11:30:./.:.:.:.:.:.
chr3	68009565	HG2_PB_SVrefine2PBcRplusDovetail_7423	A	ACAATCAGAAAAAGAAATCAAGAAAGTAATCCCATTTACAATAGCTACAAGTACAAGTAAATACTTAGGAATTAATTTAACCAAGAAAGATCTCTACAATGAAAACTGTAAAACATTGATGTCAGAAATTAAAGACACAAGAAATGAAAAGTATTCCATGTTCATGGACTGGAAGAATCAATATTGTTAAAATGTCTATACTACTCAAAGTGATGTACAGACTTAGTGCAAAGACCCAGAATAGCCAAAGCTATCCTAAGTTTTGGCTACAATGAATAAAACTGGAAGAATTACATTACGTGATTTCAAATCATAGTACGGATCTATAGTAACCAAAGCATCATTGTACTGACATAGAAACACACACATAGACCAATGTAAAAGAATACAGAACCCATAAATAAATCCATACAGTGTACTCATTTTTTACAAAGGTGCCAAGAACATACCTTGGGGGAAAGAATAATTTCTACAACAAATGGTGCTGAAAAACTGGATATCCAGATTCAGAAGAATAAAACTAGACTACTATCTCTCACCATACACAAAAGTAAAATAAAAATGAATTAAAGACTTAAATCTAAGACCTCACTATGAAACTACTACACAAACAGTGGGGACATTGGACTGGGCAAAGACTTCTTGAGAAATGCCCTATAAGAAAAGGCAACCAAAGCAAAAATGGACATATGGGATTACATCAAGTTAAAAAGCTTCTGAACAGCAAAGGATGCAATCAACAAAGTGAAGATCAACCAACAGAATCAGAGAAAATATTTGCAAACTACCTATTTGACCAGAGACTAATAACCAGAATATATAAGGAGCTCAAACAACTCTATAGGAAAAACAATTAATGTTCTGATTTAAAAATGGGCAAATAATCTGACTAGACATTTCTCAAAAGAAGACATACAAATGACAAACAGGCATATGAAAAGGTGCTCAACATCATTGATCATAAGGAAATGCAAATTAAAACTACGATGGGATATTATCTCACCCCAGTTAAAATGGCTTATATCCAAAAGACAGAAAATAACAAATGCTGGTGAAGATGTGGAGAAAAGGCAGCCCTTGTACACTGTTGGAAGGAATGTAAATTAGTGCAACATCTATGGAGGACAGCTTGGAGGTTCCTCAAAAAACTAAAAAATACAGCAACTATATGATCTAGCAATCCCACTGCTAGGTGTACACCCAAAAGAAAGGAAATCATTATATTGAAAAGACACCTTTACTTTCATTTGTTTTTGCAGTATTATTCACAATAGC	20	PASS	ClusterIDs=HG3_Ill_GATKHCSBGrefine_2228:HG4_PB_pbsv_3361:HG2_PB_pbsv_3350:HG2_PB_PB10Xdip_20890:HG2_PB_PB10Xdip_20889:HG2_Ill_breakscan11_3323:HG3_PB_pbsv_3296:HG4_PB_SVrefine2PBcRDovetail_1746:HG4_Ill_SVrefine2DISCOVARDovetail_2512:HG4_Ill_MetaSV_3381:HG4_Ill_GATKHCSBGrefine_2319:HG3_PB_SVrefine2Falcon1Dovetail_2086:HG2_PB_SVrefine2PBcRplusDovetail_7423:HG2_PB_SVrefine2PB10Xhap12_2459:HG2_PB_SVrefine2Falcon2Bionano_1531:HG2_PB_SVrefine2Falcon1plusDovetail_8026:HG2_Ill_SVrefine2DISCOVARplusDovetail_8576:HG2_Ill_GATKHCSBGrefine_2237:HG2_10X_SVrefine210Xhap12_2513:HG4_PB_SVrefine2Falcon1Dovetail_2023:HG3_Ill_SVrefine2DISCOVARDovetail_2500;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2513:HG2_Ill_GATKHCSBGrefine_2237:HG2_Ill_SVrefine2DISCOVARplusDovetail_8576:HG2_PB_SVrefine2Falcon1plusDovetail_8026:HG2_PB_SVrefine2Falcon2Bionano_1531:HG2_PB_SVrefine2PB10Xhap12_2459:HG2_PB_SVrefine2PBcRplusDovetail_7423:HG3_PB_SVrefine2Falcon1Dovetail_2086:HG4_Ill_GATKHCSBGrefine_2319:HG4_Ill_MetaSV_3381:HG4_Ill_SVrefine2DISCOVARDovetail_2512:HG4_PB_SVrefine2PBcRDovetail_1746;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0564886;ClusterMaxSizeDiff=0.0549618;ClusterMaxEditDist=0.184627;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1274;DistBack=12025;DistForward=9161;DistMin=9161;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:68009566-68009568;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3672.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:107:./.:1:3:1:13:./.:0:0:0:0:1/1:0:45:./.:18:226:.:.:.
chr3	69842644	HG2_Ill_SVrefine2DISCOVARplusDovetail_8588	G	GATGCTCATAGCATGCACCCTCTCCCAATGCTCATAGCATGCACCCTCTCCCA	20	PASS	ClusterIDs=HG2_PB_pbsv_3358:HG4_PB_HySA_5027:HG4_PB_pbsv_3368:HG4_Ill_svaba_4276:HG4_Ill_scalpel_3174:HG4_Ill_SVrefine2DISCOVARDovetail_2524:HG4_Ill_Krunchall_4873:HG4_Ill_GATKHC_5566:HG4_Ill_GATKHCSBGrefine_2326:HG4_Ill_250bpfermikitraw_4650:HG4_Ill_150bpfermikitraw_4433:HG2_PB_SVrefine2Falcon2Bionano_1539:HG2_Ill_svaba_4190:HG2_Ill_SVrefine2DISCOVARplusDovetail_8588:HG2_Ill_Krunchall_4671:HG2_Ill_GATKHC_5498:HG2_Ill_GATKHCSBGrefine_2243:HG2_Ill_250bpfermikitraw_4605:HG2_PB_HySA_6355:HG4_PB_SVrefine2PBcRDovetail_1754:HG4_PB_SVrefine2Falcon1Dovetail_2029:HG3_PB_SVrefine2Falcon1Dovetail_2093;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4605:HG2_Ill_GATKHCSBGrefine_2243:HG2_Ill_GATKHC_5498:HG2_Ill_Krunchall_4671:HG2_Ill_SVrefine2DISCOVARplusDovetail_8588:HG2_Ill_svaba_4190:HG2_PB_SVrefine2Falcon2Bionano_1539:HG4_Ill_150bpfermikitraw_4433:HG4_Ill_250bpfermikitraw_4650:HG4_Ill_GATKHCSBGrefine_2326:HG4_Ill_GATKHC_5566:HG4_Ill_Krunchall_4873:HG4_Ill_SVrefine2DISCOVARDovetail_2524:HG4_Ill_scalpel_3174:HG4_Ill_svaba_4276:HG4_PB_HySA_5027;NumExactMatchSVs=16;ClusterMaxShiftDist=0.12963;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.210526;PBcalls=8;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=-52;DistForward=40169;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=59;REFWIDENED=3:69842645-69842703;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:27:0|1:31:3:2:23:./.:0:0:0:0:0/1:17:23:./.:.:.:.:.:.
chr3	71376466	HG3_Ill_MetaSV_3418	G	GAAGCAGCCTTCTTGGCTGCAACAGAAACGTCACTTGCAAGAGAACTGCATTGTGTATAAATATGTACCCACAAATTATGAAATCTGACCACCAATCAATTTCTTAACTTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGACAGTCTCCTTCCATTGTCCAGGCTGGAATGCAGTGGCACGATCTCCACTCACTGCAACCTCCGCCTCCTGGGTTC	20	PASS	ClusterIDs=HG3_PB_pbsv_3308:HG2_PB_pbsv_3365:HG4_PB_pbsv_3373:HG2_PB_assemblyticsPBcR_17144:HG2_PB_assemblyticsfalcon_17742:HG4_PB_assemblyticsfalcon_17337:HG3_PB_assemblyticsfalcon_17643:HG2_PB_HySA_6370:HG4_Ill_MetaSV_3389:HG4_PB_SVrefine2Falcon1Dovetail_2034:HG4_Ill_SVrefine2DISCOVARDovetail_2534:HG4_Ill_GATKHCSBGrefine_2331:HG2_Ill_SVrefine2DISCOVARplusDovetail_8595:HG2_Ill_MetaSV_3250:HG4_PB_SVrefine2PBcRDovetail_1758:HG3_PB_SVrefine2Falcon1Dovetail_2098:HG3_Ill_SVrefine2DISCOVARDovetail_2516:HG3_Ill_MetaSV_3418:HG3_Ill_GATKHCSBGrefine_2241:HG2_PB_SVrefine2PBcRplusDovetail_7433:HG2_PB_SVrefine2PB10Xhap12_2470:HG2_Ill_GATKHCSBGrefine_2251:HG2_PB_SVrefine2Falcon1plusDovetail_8037:HG2_PB_SVrefine2Falcon2Bionano_1544:HG4_PB_HySA_5035:HG2_PB_PB10Xdip_20905:HG2_PB_PB10Xdip_20906;NumClusterSVs=27;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_2241:HG3_Ill_MetaSV_3418:HG3_Ill_SVrefine2DISCOVARDovetail_2516:HG3_PB_SVrefine2Falcon1Dovetail_2098:HG4_PB_SVrefine2PBcRDovetail_1758;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0914513;ClusterMaxSizeDiff=0.0914513;ClusterMaxEditDist=0.210938;PBcalls=18;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=243;DistBack=12235;DistForward=8694;DistMin=8694;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:71376467-71376469;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3674.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:1/1:1:35:0:29:./.:0:0:0:0:1/1:0:15:./.:.:.:.:.:.
chr3	71484295	HG2_PB_SVrefine2PB10Xhap12_2471	A	AGGAGGAGAGGAAGGAGAAGGAGGGAAAGGGGACGGTAGAAAGGGATGGAAGGAAGAAGGGAAGGAAGGGAAGCAGGAAAGAAGGAAGGAAGAAGGGAGGAAGGAAGAGAGGGAGGGAGGGAGGGAGGGAAGAAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGTAGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAAGGAGGGATGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGGAAGAAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGGGAGGAAGGAGGGACGGAGGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGGAGGGAAGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAGGGAGGGAGGGACGGAGGGAGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGGGACGGGAGGGAGGGAGAGGAGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGAGGGAGGGAGGGGGGGAGGGGGAGGAGGGAGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGGAGGGAGGAGGGAGGGAGGAAGGGACGGAGGGAGGGGAAGGGAAGGAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAGGAGGGACGGAGGAGGGAAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAAGGAAGGGAGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGAGAAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAAGGAAGGGGACGGAGGGAGGGAAGGAGGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGAGGGAGGAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGAGGGAGGAAGGGACGGAGGGAGGGAAAGGGACGGGAGGGAGGGACGGAGGGAGGGAGGGAGGGAGGAGGGACGGAGGGAAAGGGAGGAGGGAGGGAGGAGGGAGGGAGGGAAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAAGGAGGGACGGAGGGAGGGAGGAGGCGGAGGGAGGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGGGACGGAGGGAGGGAGGAGGACGGAGGGAGGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGAGGGAGGAGGGAGGGGAGGGAAGGGACGGAGGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGGAAGGGACGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGGAGGAGGGAGGAGGGAGGGAGGAGGGAGGGAGGAGGGAGGGAGGAAGGGACGGAGGAGGGAAGGGACGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGGGAAGGGAGGAGAGGGACGGAGGGAGGGAGGAGGGAGGGAGGAGGGACGGAGGGAGGGAAGGAGGGAGGGAGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGAAGGGACGGAGGGAGGGGAAGGAGGGACGGAGGGAGGGAGGGAGGAGGGACGGAGGGAGGGAGGGAGGGAGAGGGACGGGAGGGAGGGAGGGAGGGAGGGAGGGACGGAGGGAGGGAGAAGGGACGGAGGGAGGGAAGGAAGGGACGGAGGGAGGGAGGGAGGAGGAGGGAGGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAGGAAGGGACGGAGGGAGGGAAGAGGGACGGAGGGAGGGAGGAGGGACGGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2471:HG2_PB_SVrefine2Falcon1plusDovetail_8039;NumClusterSVs=2;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2471;NumExactMatchSVs=1;ClusterMaxShiftDist=0.139119;ClusterMaxSizeDiff=0.139119;ClusterMaxEditDist=0.168794;PBcalls=2;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=3351;DistBack=21895;DistForward=84;DistMin=84;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=814;REFWIDENED=3:71484296-71485109;PctSeqSimilarity=0.9024;PctSizeSimilarity=0.8332;PctRecOverlap=0.8335;SizeDiff=559;StartDistance=-222;EndDistance=-222;GTMatch=1;TruScore=85;MatchId=3675.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:1/1:0:21:5:19:./.:0:2:1:2:./.:0:1:./.:6:56:.:3165:.
chr3	71588253	HG4_PB_SVrefine2Falcon1Dovetail_2036	T	TTTTTTTGTTTTTATTTTTTTTTTGTTTGAGATGGGGTCTCGCTCTGTCGCCCAGGCTGGGGTGCAGTGGCGCAATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTATTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTATAGACTGTTTTCGGTTTTTAAATTGGGAGGTGTGAGTCCTCCAACTCCG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2101:HG2_PB_pbsv_3368:HG4_PB_HySA_5039:HG4_PB_pbsv_3375:HG4_Ill_MetaSV_3390:HG2_Ill_GATKHCSBGrefine_2254:HG4_Ill_GATKHCSBGrefine_2332:HG3_Ill_GATKHCSBGrefine_2242:HG3_Ill_MetaSV_3419:HG2_PB_HySA_6374:HG3_PB_HySA_5204:HG2_PB_SVrefine2Falcon1plusDovetail_8040:HG2_PB_SVrefine2Falcon2Bionano_1546:HG4_PB_SVrefine2PBcRDovetail_1760:HG4_PB_SVrefine2Falcon1Dovetail_2036:HG4_Ill_SVrefine2DISCOVARDovetail_2538:HG3_Ill_SVrefine2DISCOVARDovetail_2517;NumClusterSVs=17;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_2538:HG4_PB_SVrefine2Falcon1Dovetail_2036:HG4_PB_SVrefine2PBcRDovetail_1760;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0717489;ClusterMaxSizeDiff=0.0687593;ClusterMaxEditDist=0.208999;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=332;DistBack=56309;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=293;REFWIDENED=3:71588254-71588546;PctSeqSimilarity=0.9806;PctSizeSimilarity=0.994;PctRecOverlap=0.7568;SizeDiff=2;StartDistance=-80;EndDistance=-80;GTMatch=0;TruScore=91;MatchId=3676.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:39:./.:18:8:7:25:./.:0:0:0:0:0/1:8:7:./.:2:23:.:.:.
chr3	72086669	HG2_PB_PB10Xdip_20917	C	CCCTCCCTCCTCCCTCCCTCCTTCCCTCCCTTCCTTCCTTCCTTCCTCCTCCCTCCCTTCCTCCCCCCTCCCTCTCCTCCTCCTTCCCTCTCCTCCCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCATTCCCTTCCTCCTTCCTTCCTCCCTCCCTCCCTCCTCCCTTTCTCCCTCTTTCTCTCCTTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCATTCCCTTCCTCCTTCCTTCCTCCCTCCCTCCCTCCTCCCTTCCTCCCTTTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCTCCCTTCCTCCCTCTTTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCTCCCTTCCTCCCTCTTTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCCTCCCTCCCTCCTTCCCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCTTCCCTTCCTTCCTCCTCCCTCCCTCCTCCCTCCCTCTTTTCCTTCCTCCCTCT	10	PASS	ClusterIDs=HG3_PB_pbsv_3311:HG4_PB_HySA_5042:HG4_PB_pbsv_3376:HG3_PB_SVrefine2Falcon1Dovetail_2102:HG2_PB_SVrefine2Falcon1plusDovetail_8041:HG2_PB_assemblyticsfalcon_17751:HG4_PB_assemblyticsfalcon_17344:HG2_PB_PB10Xdip_20918:HG2_PB_HySA_6378:HG2_PB_PB10Xdip_20917:HG2_PB_SVrefine2PBcRplusDovetail_7434:HG4_PB_HySA_5041:HG2_PB_SVrefine2Falcon2Bionano_1547:HG2_PB_SVrefine2PB10Xhap12_2473:HG2_PB_pbsv_3369:HG4_PB_SVrefine2PBcRDovetail_1761:HG4_PB_SVrefine2Falcon1Dovetail_2037;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_20917:HG2_PB_PB10Xdip_20918;NumExactMatchSVs=2;ClusterMaxShiftDist=0.3173;ClusterMaxSizeDiff=0.3173;ClusterMaxEditDist=0.327586;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=6;NumTechs=1;NumTechsExact=1;SVLEN=631;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=3:72086670-72086712;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.989;PctRecOverlap=0.9875;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3677.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:37:./.:0:8:0:4:./.:0:0:0:0:./.:1:10:0/1:5:19:.:.:.
chr3	72260464	HG2_Ill_GATKHCSBGrefine_2257	A	ACACACACACACACACACAAAACTTCAACACACATACACTCCTCTAACACACACACCCCTCTGATACACACACACATCCCTAACACACACATACACAACCTCTAACACACACACGTACTCCTAACACACGCCCCTAACACACACACCTCTAACACACACACCCCTAACACACACACACCTCTAACACATACACACTCCTAACACACACACCCCTAAGAAACACTCACCTCTAACACACACACACCTCTAACATACAGACACATCCCTAACACACATACACACCTCTAACACACACTCATCCTTAACACACACCTCTAACACACACATACTGCTAACACACACACACAACTCTAACACACACACATCCCTAACACATACCTCTAACACACACACATACTAACACACATCCCAACACACACACACCTCTAACACACACACGTACTCCTAACACACACATACACACACACACCCTAATGCATACACACCTAATATACACACACACCTCCAACATACACATACACACACCTAATACACATACCTAATACACACACGTAACACACACATACACCTCT	20	PASS	ClusterIDs=HG4_PB_pbsv_3379:HG2_PB_pbsv_3373:HG3_PB_pbsv_3314:HG2_PB_PB10Xdip_20920:HG2_PB_PB10Xdip_20921:HG3_PB_HySA_5211:HG4_Ill_MetaSV_3392:HG3_Ill_MetaSV_3421:HG3_Ill_GATKHCSBGrefine_2245:HG2_Ill_GATKHCSBGrefine_2257:HG2_Ill_MetaSV_3252:HG4_PB_HySA_5046:HG2_PB_assemblyticsfalcon_17755:HG4_PB_assemblyticsfalcon_17347:HG4_PB_SVrefine2PBcRDovetail_1763:HG4_Ill_SVrefine2DISCOVARDovetail_2543:HG2_Ill_SVrefine2DISCOVARplusDovetail_8599:HG2_PB_SVrefine2Falcon2Bionano_1550:HG2_PB_SVrefine2Falcon1plusDovetail_8043:HG3_Ill_SVrefine2DISCOVARDovetail_2522:HG4_PB_SVrefine2Falcon1Dovetail_2039:HG2_PB_SVrefine2PB10Xhap12_2475:HG2_PB_SVrefine2PBcRplusDovetail_7437:HG3_PB_SVrefine2Falcon1Dovetail_2104;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2257:HG3_Ill_GATKHCSBGrefine_2245;NumExactMatchSVs=2;ClusterMaxShiftDist=0.1988;ClusterMaxSizeDiff=0.1988;ClusterMaxEditDist=0.256098;PBcalls=16;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=571;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=3:72260448-72260476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3678.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:1/1:1:28:1:23:./.:0:0:0:0:1/1:0:20:1/1:2:141:.:.:.
chr3	72386652	HG2_PB_SVrefine2Falcon2Bionano_1551	T	TTGTGTATGTGTGGTGTGTGTGCATGTGTGTGAGCGGATGTGTGTGGGCCTGTGTATGTGTTGGCATATGTGGTGTGTGTAGTGGGGTTGTTTGTGATTGTGTGGTGTGTGTGTGTATAGTGTGTTTGGGGGATGTTTGTGATTTGTGGTGTGTGTGTGTGGTGGCTATGGTGGGGGTGTTTGTGATTGTGTGGTGTGTGTGGGTGTGTATGTGTGTGGTGTCTGTGGTGGTGTTTGTGTGGTGTGTGTATGTGCGTGGCAGGGGTATTTGTGATTGTGTGATGTGTGTGTGGTGGGTGTGGTGGGGGTGTTTGTGATTGTGTGGTGTGATGTGTGGGTGTGTATGTGTGTGGTGGGTGTGGTGGTGTTTGGACTGTGGTGTGTGTGTGGGTATGTGTGGTGTGTGGGTGTGTATGTGTGGTGTGTGTGATGTGTGTGGGTGTGTATGGTGTGTGTGATGTGTGTGGGTGTGTATGTGTGGTGTGTGTGGTGTGTGGGTGTGGTGGGGGTGTGTGTGATTGTGTGGGGTTGTGTGTGGGTGTGTGTGTGTGGGGGTGTGTATGTGTGTGGTGTATGATATGTGGGGGTATGTGTGGTGTGTGAGTGTGTATGTGTGGTGTGTGTGGGTGTGTATGTGTGAGGTATGTGTGGGTGTATATGTGTGTGGTGTGTGGTATGTGGGGGTATGTGTGGTGTGTGTGGGTGTGTATATGTGTATGTGTGGTGTGTGGGTGTGTGTGGTGTGTGTGGGTGTGTATATATGTGTATATGTGTATGTGTGTTGTGGGTGTGGGTCTGTATGTGTGTGATGTGTGTGGGTGTGTATGTGTGGTGTGCATGGTGTGTGTGTGGGTGTGGTGGGGTGTTCGTGATTGTGTGGTGTTGTGTGTGGGTGTGTATGTGGGTGGTGTGTGATGTGTGTGGGTGTGTATGTGTGTGGTATGTGTGGGTGTGCATGTGTGTGGTGTGTGGTATGTGGGGGTGTATATGTGTGGTGTATGTGGGTGTGTGGTGTGCGTGGGTGTGTATATATGTATGTGTGGTGTGTATATGTGTATGTGTGGTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2040:HG2_PB_pbsv_3375:HG2_PB_HySA_6391:HG3_PB_pbsv_3315:HG2_Ill_breakscan11_3325:HG4_PB_pbsv_3380:HG2_PB_PB10Xdip_20923:HG2_PB_PB10Xdip_20922:HG3_Ill_MetaSV_3422:HG2_PB_assemblyticsfalcon_17756:HG4_PB_assemblyticsfalcon_17348:HG2_PB_HySA_6390:HG2_PB_SVrefine2Falcon1plusDovetail_8044:HG4_Ill_SVrefine2DISCOVARDovetail_2544:HG2_PB_SVrefine2PBcRplusDovetail_7438:HG2_PB_SVrefine2Falcon2Bionano_1551:HG2_PB_SVrefine2PB10Xhap12_2476:HG2_Ill_SVrefine2DISCOVARplusDovetail_8600:HG3_Ill_SVrefine2DISCOVARDovetail_2523:HG3_PB_SVrefine2Falcon1Dovetail_2105;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1551:HG2_PB_SVrefine2PBcRplusDovetail_7438;NumExactMatchSVs=2;ClusterMaxShiftDist=0.151099;ClusterMaxSizeDiff=0.151099;ClusterMaxEditDist=0.213754;PBcalls=15;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1065;DistBack=14330;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=3:72386653-72386681;PctSeqSimilarity=0.9991;PctSizeSimilarity=1;PctRecOverlap=0.9887;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=99;MatchId=3679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:70:1/1:1:29:1:12:./.:0:0:0:0:1/1:0:20:1/1:5:234:.:1191:.
chr3	72496242	HG2_PB_SVrefine2PB10Xhap12_2478	CATCA	TCCCTTTGTCTGGGAGGAGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGGCGGCTGAGGAGGAGCCGCCATGGCTGCGGCGCGCACGGCCGCCGGCCCCGAGCGGGAGCGACACCGCCTCCCGCCGCCGCCGCCACCGCCACCGCCCGCCGCCTCCCCCCGCCCCCGGATCTCCATCTTAGCAGCGCCTCCCCCCGCCCCGGGTGGCTCCGGGGCCTAGTCGTCGCCGGCCCCCGCCCGCCCCCAGCCCTCCCTCCCCTTCCGCCCCCTCCGCTCGGAGCAGGTACCTGGTCGGGCTCTTCTTGTCGCCCATGGTCATGGATGGGCTGTACCCCGCCCCCCCCAAGCCGAAACCGGCGCCGCTCGGAGGAGAAACGCCGTCCGGGGAGTCGTCGCGGACCGGCCCCCCTCCCTCCCCCGCGCCCGCCCGCCCGCCCTCAGCCGCTGGGGCTCGAGCTCCGGCCGCCGCCGCCGCCGCCGCCGC	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3253:HG4_PB_pbsv_3382:HG4_PB_HySA_5050:HG3_PB_SVrefine2Falcon1Dovetail_2107:HG4_Ill_SVrefine2DISCOVARDovetail_2546:HG3_Ill_SVrefine2DISCOVARDovetail_2525:HG2_Ill_SVrefine2DISCOVARplusDovetail_8602:HG2_PB_SVrefine2PBcRplusDovetail_7440:HG2_PB_SVrefine2PB10Xhap12_2478:HG2_PB_SVrefine2Falcon2Bionano_1553:HG2_PB_PB10Xdip_20925:HG2_PB_PB10Xdip_20924:HG2_PB_assemblyticsfalcon_17758:HG2_PB_SVrefine2Falcon1plusDovetail_8046:HG4_PB_assemblyticsfalcon_17350:HG4_PB_SVrefine2Falcon1Dovetail_2042:HG4_PB_SVrefine2PBcRDovetail_1765:HG3_PB_pbsv_3317:HG4_Ill_MetaSV_3393:HG3_Ill_MetaSV_3423;NumClusterSVs=20;ExactMatchIDs=HG2_PB_PB10Xdip_20924:HG2_PB_PB10Xdip_20925:HG2_PB_SVrefine2Falcon2Bionano_1553:HG2_PB_SVrefine2PB10Xhap12_2478:HG2_PB_SVrefine2PBcRplusDovetail_7440;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0538922;ClusterMaxSizeDiff=0.0518962;ClusterMaxEditDist=0.188605;PBcalls=14;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=490;DistBack=-4;DistForward=1;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:72496247-72496241;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9939;PctRecOverlap=0.996;SizeDiff=-3;StartDistance=-2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=3680.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:44:1/1:1:8:0:19:./.:0:0:0:0:1/1:0:14:0/1:4:22:.:.:.
chr3	76014610	HG2_Ill_SVrefine2DISCOVARplusDovetail_8610	A	ATGTACACGTGCGCAGGGATCTTTGTCCTTTGTGATTAGTGTAATTGTGCATACCCATCTTGTTTGTGAGTCTCTTGGTCATTCCAAACTAAGCTAATGATCCTGTACTTTATCTTCATGCAACAGTTCGAATTGTTTGATTTGTTTATCTTCATGCAATTGTTTGAATTGTTTATCTTCATGCAACAGTCTGAATTGTTAAATGTGCAGTCAATATTGTATATGAACTATTCAGATATGTGTGATGTACATGTGCACGGGGATCTTTGTCCTTTGTGATTGGTATAATTGTGCATACCCATCTTGTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2109:HG4_PB_pbsv_3394:HG2_PB_HySA_6413:HG2_PB_pbsv_3388:HG4_PB_assemblyticsfalcon_17367:HG3_PB_pbsv_3327:HG4_PB_SVrefine2Falcon1Dovetail_2047:HG2_PB_PB10Xdip_20953:HG2_PB_PB10Xdip_20952:HG3_Ill_MetaSV_3426:HG2_Ill_MetaSV_3256:HG4_Ill_MetaSV_3397:HG4_PB_SVrefine2PBcRDovetail_1772:HG4_Ill_SVrefine2DISCOVARDovetail_2558:HG3_Ill_SVrefine2DISCOVARDovetail_2539:HG2_PB_SVrefine2PBcRplusDovetail_7447:HG2_PB_SVrefine2PB10Xhap12_2490:HG2_PB_SVrefine2Falcon2Bionano_1559:HG2_PB_SVrefine2Falcon1plusDovetail_8052:HG2_Ill_SVrefine2DISCOVARplusDovetail_8610:HG2_10X_SVrefine210Xhap12_2522;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2522:HG2_Ill_SVrefine2DISCOVARplusDovetail_8610:HG2_PB_SVrefine2Falcon1plusDovetail_8052:HG2_PB_SVrefine2Falcon2Bionano_1559:HG2_PB_SVrefine2PB10Xhap12_2490:HG2_PB_SVrefine2PBcRplusDovetail_7447:HG3_Ill_SVrefine2DISCOVARDovetail_2539:HG4_Ill_SVrefine2DISCOVARDovetail_2558;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0695103;ClusterMaxSizeDiff=0.0663507;ClusterMaxEditDist=0.248834;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=307;DistBack=28862;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=127;REFWIDENED=3:76014611-76014737;PctSeqSimilarity=0.9969;PctSizeSimilarity=1;PctRecOverlap=0.9609;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=98;MatchId=3681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:100:1/1:2:23:0:28:./.:0:0:0:0:1/1:0:32:1/1:1:46:.:.:.
chr3	76123057	HG4_Ill_SVrefine2DISCOVARDovetail_2561	C	CAATATGGTGTCTCTGTGGGGCCCGTGTGGAAATGTGAAGCTGAGGCTCCAGGTCCATGAAGGTCATTTCTCACTCTTCAGTTTCATCAGAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1561:HG4_PB_assemblyticsfalcon_17374:HG4_PB_SVrefine2Falcon1Dovetail_2051:HG2_PB_PB10Xdip_20959:HG2_PB_PB10Xdip_20958:HG4_Ill_250bpfermikitraw_4693:HG4_PB_HySA_5073:HG4_PB_SVrefine2PBcRDovetail_1773:HG4_Ill_SVrefine2DISCOVARDovetail_2561:HG2_PB_SVrefine2PB10Xhap12_2492;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1561:HG4_PB_SVrefine2PBcRDovetail_1773:HG4_Ill_SVrefine2DISCOVARDovetail_2561:HG2_PB_SVrefine2PB10Xhap12_2492;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0659341;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=91;DistBack=638;DistForward=52;DistMin=52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=372;REFWIDENED=3:76123058-76123429;PctSeqSimilarity=0.9826;PctSizeSimilarity=1;PctRecOverlap=0.7473;SizeDiff=0;StartDistance=-23;EndDistance=-23;GTMatch=0;TruScore=90;MatchId=3684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:0|1:29:2:1:27:./.:0:0:0:0:0/0:42:0:./.:.:.:.:.:.
chr3	76246453	HG4_PB_HySA_5076	G	GGGGAATGATAATCCACTGAGCTAATCAATCTCTCTATAGATTTGGATCTGGCCTGCCTTTCTCCTTTT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_1774:HG4_PB_pbsv_3401:HG4_PB_HySA_5076:HG2_PB_pbsv_3394;NumClusterSVs=4;ExactMatchIDs=HG4_PB_HySA_5076;NumExactMatchSVs=1;ClusterMaxShiftDist=0.137931;ClusterMaxSizeDiff=0.0965517;ClusterMaxEditDist=0.231293;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=68;DistBack=2929;DistForward=6023;DistMin=2929;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=488;REFWIDENED=3:76246231-76246718;PctSeqSimilarity=0.98;PctSizeSimilarity=0.9714;PctRecOverlap=0.9155;SizeDiff=-2;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=95;MatchId=3685.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:32:./.:12:11:9:9:./.:0:0:0:0:0/0:15:0:./.:.:.:.:.:.
chr3	76252736	HG2_Ill_250bpfermikitraw_4644	C	CTCGGCTTCCCCCGTCAACAGATCACAGGTCATGGTTCTAGTAACCTGAGTGAGATTGCCTCAGGCTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2527:HG3_PB_pbsv_3332:HG3_PB_HySA_5237:HG4_PB_pbsv_3402:HG2_PB_PB10Xdip_20962:HG2_PB_PB10Xdip_20961:HG4_PB_HySA_5077:HG4_Ill_GATKHC_5624:HG2_PB_pbsv_3395:HG4_Ill_GATKHCSBGrefine_2350:HG4_Ill_250bpfermikitraw_4698:HG3_Ill_Spiral_3670:HG3_Ill_GATKHC_5639:HG3_Ill_250bpfermikitraw_4562:HG3_Ill_150bpfermikitraw_4414:HG2_Ill_SpiralSDKrefine_11156:HG2_Ill_GATKHC_5551:HG2_Ill_250bpfermikitraw_4644:HG4_Ill_Krunchall_4921:HG2_Ill_breakscan11_3328:HG4_PB_SVrefine2Falcon1Dovetail_2052:HG4_Ill_SVrefine2DISCOVARDovetail_2562:HG3_Ill_SVrefine2DISCOVARDovetail_2544:HG2_PB_SVrefine2PBcRplusDovetail_7449:HG2_PB_SVrefine2PB10Xhap12_2494:HG2_PB_SVrefine2Falcon1plusDovetail_8055:HG2_Ill_SVrefine2DISCOVARplusDovetail_8612;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4644:HG2_Ill_GATKHC_5551:HG2_Ill_SpiralSDKrefine_11156:HG3_Ill_150bpfermikitraw_4414:HG3_Ill_250bpfermikitraw_4562:HG3_Ill_GATKHC_5639:HG3_Ill_Spiral_3670:HG4_Ill_250bpfermikitraw_4698;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0735294;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.277372;PBcalls=11;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=67;DistBack=-141;DistForward=7;DistMin=-141;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=160;REFWIDENED=3:76252719-76252878;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:0:21:3:17:./.:0:0:0:0:1/1:1:15:./.:.:.:.:.:.
chr3	76255615	HG3_Ill_SVrefine2DISCOVARDovetail_2545	A	AATTTCCCTTATCAAGTGCTCTGGGTCCAACGTGCATATAGACACTCACATGTGTTAAAAGTTCAGAGTGCCTCCTTCACCACTGCTTGAGTG	20	PASS	ClusterIDs=HG3_PB_HySA_5238:HG2_PB_pbsv_3396:HG4_PB_SVrefine2Falcon1Dovetail_2053:HG3_PB_pbsv_3333:HG3_PB_SVrefine2Falcon1Dovetail_2115:HG2_10X_SVrefine210Xhap12_2528:HG3_Ill_SVrefine2DISCOVARDovetail_2545:HG3_Ill_250bpfermikitraw_4563:HG2_PB_SVrefine2Falcon1plusDovetail_8056;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8056:HG3_Ill_250bpfermikitraw_4563:HG3_Ill_SVrefine2DISCOVARDovetail_2545:HG3_PB_SVrefine2Falcon1Dovetail_2115:HG4_PB_SVrefine2Falcon1Dovetail_2053;NumExactMatchSVs=5;ClusterMaxShiftDist=0.102041;ClusterMaxSizeDiff=0.102041;ClusterMaxEditDist=0.232323;PBcalls=6;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=92;DistBack=-1;DistForward=14761;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=184;REFWIDENED=3:76255616-76255799;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3687.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:20:./.:15:9:10:6:./.:0:0:0:0:0/1:18:9:./.:.:.:.:.:.
chr3	76747252	HG2_Ill_150bpfermikitraw_4315	C	CAGAAGCTCTTCTATTCTATTCATTGGTTGGAAGAATTGGATGTAGAATGCCTGT	20	PASS	ClusterIDs=HG4_PB_HySA_5083:HG3_PB_pbsv_3336:HG2_PB_assemblyticsfalcon_17788:HG2_PB_HySA_6427:HG2_PB_pbsv_3398:HG4_Ill_GATKHC_5631:HG4_Ill_GATKHCSBGrefine_2352:HG4_Ill_150bpfermikitraw_4481:HG3_Ill_Krunchall_4697:HG3_Ill_GATKHC_5649:HG3_Ill_GATKHCSBGrefine_2262:HG2_Ill_GATKHC_5560:HG2_Ill_GATKHCSBGrefine_2274:HG2_Ill_250bpfermikitraw_4651:HG2_Ill_150bpfermikitraw_4315:HG2_PB_PB10Xdip_20965:HG2_PB_PB10Xdip_20964;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4315:HG2_Ill_250bpfermikitraw_4651:HG2_Ill_GATKHCSBGrefine_2274:HG2_Ill_GATKHC_5560:HG3_Ill_GATKHCSBGrefine_2262:HG3_Ill_GATKHC_5649:HG3_Ill_Krunchall_4697:HG4_Ill_150bpfermikitraw_4481:HG4_Ill_GATKHCSBGrefine_2352:HG4_Ill_GATKHC_5631;NumExactMatchSVs=10;ClusterMaxShiftDist=0.107143;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.247788;PBcalls=7;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=7;DistForward=24;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=218;REFWIDENED=3:76747063-76747280;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3688.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:75:./.:4:8:0:40:./.:0:0:0:0:0/1:5:26:./.:.:.:.:.:.
chr3	76985870	HG2_Ill_SVrefine2DISCOVARplusDovetail_8613	T	TAAGAATTCATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCTGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAGAAAAGAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_6432:HG3_PB_pbsv_3340:HG2_PB_PB10Xdip_20969:HG4_PB_pbsv_3408:HG2_PB_pbsv_3403:HG4_PB_assemblyticsfalcon_17385:HG4_PB_HySA_5087:HG2_PB_SVrefine2PB10Xhap12_2498:HG3_PB_HySA_5245:HG3_Ill_manta_760:HG3_Ill_MetaSV_3429:HG3_Ill_GATKHCSBGrefine_2263:HG3_PB_SVrefine2Falcon1Dovetail_2118:HG4_PB_SVrefine2Falcon1Dovetail_2055:HG4_Ill_MetaSV_3400:HG4_Ill_GATKHCSBGrefine_2353:HG2_Ill_SVrefine2DISCOVARplusDovetail_8613:HG2_Ill_MetaSV_3258:HG2_Ill_GATKHCSBGrefine_2275:HG2_10X_SVrefine210Xhap12_2533:HG2_Ill_manta_955;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2533:HG2_Ill_GATKHCSBGrefine_2275:HG2_Ill_MetaSV_3258:HG2_Ill_SVrefine2DISCOVARplusDovetail_8613:HG4_Ill_GATKHCSBGrefine_2353:HG4_Ill_MetaSV_3400;NumExactMatchSVs=6;ClusterMaxShiftDist=0.211726;ClusterMaxSizeDiff=0.208469;ClusterMaxEditDist=0.272727;PBcalls=11;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=320;DistBack=11770;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=3:76985871-76985883;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3690.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:48:0|1:20:0:0:37:./.:0:0:0:0:0/1:22:8:0/1:11:32:.:.:.
chr3	78359918	HG4_Ill_GATKHCSBGrefine_2358	G	GAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAGAAAGA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8619:HG2_Ill_manta_958:HG4_Ill_GATKHC_5647:HG4_Ill_GATKHCSBGrefine_2358:HG4_Ill_250bpfermikitraw_4719:HG2_Ill_GATKHC_5576:HG2_Ill_GATKHCSBGrefine_2279:HG4_PB_pbsv_3418:HG2_PB_SVrefine2Falcon2Bionano_1564;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2279:HG2_Ill_GATKHC_5576:HG4_Ill_250bpfermikitraw_4719:HG4_Ill_GATKHCSBGrefine_2358:HG4_Ill_GATKHC_5647;NumExactMatchSVs=5;ClusterMaxShiftDist=0.212121;ClusterMaxSizeDiff=0.212121;ClusterMaxEditDist=0.232558;PBcalls=2;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=57;DistForward=40382;DistMin=57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=121;REFWIDENED=3:78359853-78359973;PctSeqSimilarity=0.9726;PctSizeSimilarity=0.9459;PctRecOverlap=0.9467;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=3691.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:0|1:22:7:4:16:./.:0:0:0:0:0/1:9:10:./.:.:.:.:.:.
chr3	79576979	HG2_PB_SVrefine2Falcon2Bionano_1568	T	TAGAATTTGTGGGTTTGTTTTGCATCCAGTTGAAGTTCAGCAGGAAGGTCAGTGATGGGCTGGAATGGAGATGTAGCAGATATTGACACTTCCGTATGAAAAAAATAATCGGGCCCCTCTACAAGGTGTGTGTGAATACTGACTCTCAGACCTTGGTAATTCCAAAGATATTGTAATTATCTCCTTTTGTCATTGAAATAATCAATACCTCCTTGAAATACAAATGAATTAAGTGTGTAAATGTTCAAGTCCAATTGTCCTTTTTAAAAACATTTAGACTAGGAGAGAGTGGTTACTCTACCGCTCAGCAAGAAAATACTCTTGAAAATAGCCTTGGGTTTTTGATGGGAGGAATTGTTACCTTTATTTTCTTCACTAGATCAGGGGACAAACCTGGAGAAGTAAGGTCAAAATAATCTATCTAGTGTAAAGAGAAGACACCAACTTTTAGCTAGGACCAAGAAAAAAGAAAGAGAATGTAATGTTGGGGATGGAAATGAAAATGCAACCTCTTTTCTGTCCCTGGGATTTTGTTGTTAACAAGAGGGAGAGGGAGGAGCAAAATAAACAACCAGACATGATTACATAGTTTATCTCATTCAAGACAACCTTAGAGTAAACAGAGATGCATAAAATCATCGGAAAGAAATTTGGTTGTGTATTATAAAGTTGTAGAACAGGCACTTTAACCCAAGACATTTTCAGGTAAAGGAGGAGCCCTAAGTTTAACTTTCCTAGCTGTCCTCAATCTCTCTTGACATGAACACTGAGTTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2539:HG3_PB_pbsv_3357:HG2_PB_pbsv_3418:HG2_PB_SVrefine2PBcRplusDovetail_7459:HG3_Ill_SVrefine2DISCOVARDovetail_2557:HG3_Ill_MetaSV_3433:HG2_PB_SVrefine2Falcon2Bionano_1568:HG2_Ill_SVrefine2DISCOVARplusDovetail_8625:HG2_Ill_MetaSV_3260:HG2_PB_SVrefine2Falcon1plusDovetail_8062:HG3_PB_SVrefine2Falcon1Dovetail_2125:HG3_PB_HySA_5270;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_MetaSV_3260:HG2_Ill_SVrefine2DISCOVARplusDovetail_8625:HG2_PB_SVrefine2Falcon2Bionano_1568:HG3_Ill_MetaSV_3433:HG3_Ill_SVrefine2DISCOVARDovetail_2557;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0950546;ClusterMaxSizeDiff=0.0937701;ClusterMaxEditDist=0.172778;PBcalls=7;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=773;DistBack=25094;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=148;REFWIDENED=3:79576980-79577127;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3693.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:66:0|1:27:0:1:37:./.:0:0:0:0:0/1:15:15:0/1:10:32:.:.:.
chr3	79662022	HG2_PB_SVrefine2Falcon2Bionano_1569	G	GCAAGTACTAGAGGAGGACTTGATATATAAATTGTAAATCACATGAAGGTGAAATAGCAACACAGCATTCTGTGGCAGTGACTTCTGCAGTGTTTGTAAAAGATAATAGTCTGTTCTGCGAAGGACATGAACAGACTATTATCTTTTACAAACACTGCAGAAGTCACTGCCACAGAATGCTGTGTTGGTATTTCGCCTTCATGTGATTTACAATTTATATAT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_21032:HG4_PB_HySA_5100:HG3_PB_pbsv_3359:HG4_PB_assemblyticsfalcon_17406:HG2_PB_pbsv_3419:HG2_PB_assemblyticsfalcon_17814:HG2_PB_HySA_6467:HG4_PB_SVrefine2PBcRDovetail_1780:HG3_PB_assemblyticsfalcon_17716:HG2_PB_assemblyticsPBcR_17216:HG4_PB_SVrefine2Falcon1Dovetail_2062:HG3_PB_SVrefine2Falcon1Dovetail_2126:HG2_PB_SVrefine2PBcRplusDovetail_7460:HG2_PB_SVrefine2PB10Xhap12_2506:HG2_PB_SVrefine2Falcon2Bionano_1569:HG2_PB_SVrefine2Falcon1plusDovetail_8063:HG2_10X_SVrefine210Xhap12_2540:HG2_Ill_MetaSV_3261:HG2_Ill_manta_960:HG3_Ill_MetaSV_3435:HG4_Ill_MetaSV_3403:HG2_Ill_GATKHCSBGrefine_2282:HG4_Ill_GATKHCSBGrefine_2362:HG3_Ill_GATKHCSBGrefine_2269:HG3_Ill_manta_761:HG4_Ill_manta_819:HG4_PB_pbsv_3423;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2540:HG2_PB_SVrefine2Falcon1plusDovetail_8063:HG2_PB_SVrefine2Falcon2Bionano_1569:HG2_PB_SVrefine2PB10Xhap12_2506:HG2_PB_SVrefine2PBcRplusDovetail_7460:HG3_PB_SVrefine2Falcon1Dovetail_2126:HG4_PB_SVrefine2Falcon1Dovetail_2062:HG4_PB_SVrefine2PBcRDovetail_1780;NumExactMatchSVs=8;ClusterMaxShiftDist=0.142222;ClusterMaxSizeDiff=0.0886918;ClusterMaxEditDist=0.30735;PBcalls=17;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=221;DistBack=37381;DistForward=4947;DistMin=4947;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=3:79662023-79662027;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:28:0:25:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr3	79668251	HG3_Ill_scalpel_3447	T	TGCAGGGACGCCTGCCCTGATCATTCACCCACATTCCACTGGTGTCTGATCATC	20	PASS	ClusterIDs=HG3_PB_HySA_5272:HG3_PB_pbsv_3360:HG4_Ill_Krunchall_4945:HG4_PB_pbsv_3424:HG4_Ill_250bpfermikitraw_4729:HG2_PB_pbsv_3420:HG4_Ill_150bpfermikitraw_4499:HG2_Ill_scalpel_3316:HG2_Ill_SpiralSDKrefine_11175:HG2_Ill_Krunchall_4748:HG2_Ill_GATKHC_5594:HG2_Ill_GATKHCSBGrefine_2283:HG2_Ill_250bpfermikitraw_4673:HG4_PB_assemblyticsfalcon_17407:HG2_PB_HySA_6468:HG4_PB_HySA_5101:HG4_Ill_svaba_4340:HG4_Ill_GATKHC_5659:HG4_Ill_GATKHCSBGrefine_2363:HG3_Ill_svaba_4367:HG3_Ill_scalpel_3447:HG3_Ill_Spiral_3698:HG3_Ill_Krunchall_4721:HG3_Ill_GATKHC_5689:HG3_Ill_GATKHCSBGrefine_2270:HG3_Ill_250bpfermikitraw_4600:HG3_Ill_150bpfermikitraw_4446:HG2_Ill_svaba_4255;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_svaba_4255:HG3_Ill_150bpfermikitraw_4446:HG3_Ill_250bpfermikitraw_4600:HG3_Ill_GATKHCSBGrefine_2270:HG3_Ill_GATKHC_5689:HG3_Ill_Krunchall_4721:HG3_Ill_Spiral_3698:HG3_Ill_scalpel_3447:HG3_Ill_svaba_4367:HG4_Ill_GATKHCSBGrefine_2363:HG4_Ill_GATKHC_5659:HG4_Ill_svaba_4340;NumExactMatchSVs=12;ClusterMaxShiftDist=0.126126;ClusterMaxSizeDiff=0.107143;ClusterMaxEditDist=0.307692;PBcalls=7;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=1280;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=223;REFWIDENED=3:79668125-79668347;PctSeqSimilarity=0.9815;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:25:0|1:30:1:0:21:./.:0:0:0:0:0/1:20:18:./.:.:.:.:.:.
chr3	80815247	HG4_Ill_Cortex_2387	AACTTC	CAGGTCAGGTAAATTTTCATAATACCAGATTCAAATGCATTTCAGAGGCCATTTTTTAAATAAACTAAACTAAA	20	PASS	ClusterIDs=HG3_PB_HySA_5284:HG4_PB_HySA_5110:HG4_Ill_Krunchall_4956:HG3_Ill_Krunchall_4735:HG2_Ill_Krunchall_4758:HG2_PB_HySA_6480:HG4_Ill_manta_822:HG4_Ill_Cortex_2387:HG3_Ill_manta_764:HG3_Ill_Spiral_3709:HG3_Ill_Cortex_2421:HG2_Ill_manta_962:HG2_Ill_SpiralSDKrefine_11185:HG2_Ill_Cortex_5646:HG3_PB_pbsv_3365:HG2_PB_pbsv_3425:HG4_Ill_250bpfermikitraw_4741:HG3_Ill_250bpfermikitraw_4610:HG3_Ill_150bpfermikitraw_4458:HG2_Ill_250bpfermikitraw_4682:HG2_Ill_150bpfermikitraw_4347:HG4_PB_pbsv_3430;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_Cortex_5646:HG2_Ill_SpiralSDKrefine_11185:HG2_Ill_manta_962:HG3_Ill_Cortex_2421:HG3_Ill_Spiral_3709:HG3_Ill_manta_764:HG4_Ill_Cortex_2387:HG4_Ill_manta_822;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0985916;ClusterMaxSizeDiff=0.0833333;ClusterMaxEditDist=0.248276;PBcalls=6;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:80815246-80815253;PctSeqSimilarity=0.9799;PctSizeSimilarity=0.9853;PctRecOverlap=0.9054;SizeDiff=1;StartDistance=1;EndDistance=6;GTMatch=0;TruScore=95;MatchId=3698.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:38:./.:21:9:3:24:./.:0:0:0:0:0/1:29:30:./.:.:.:.:.:.
chr3	80964875	HG2_Ill_GATKHCSBGrefine_2288	T	TAAAATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_3368:HG4_Ill_MetaSV_3406:HG4_PB_HySA_5113:HG2_PB_pbsv_3428:HG4_PB_assemblyticsfalcon_17422:HG4_Ill_GATKHCSBGrefine_2370:HG3_Ill_MetaSV_3438:HG3_Ill_GATKHCSBGrefine_2300:HG2_Ill_MetaSV_3264:HG2_Ill_GATKHCSBGrefine_2288:HG4_PB_SVrefine2PBcRDovetail_1783:HG4_PB_SVrefine2Falcon1Dovetail_2066:HG3_PB_SVrefine2Falcon1Dovetail_2129:HG4_PB_pbsv_3432:HG2_Ill_manta_963;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2288:HG2_Ill_MetaSV_3264:HG3_Ill_GATKHCSBGrefine_2300:HG3_Ill_MetaSV_3438;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0981013;ClusterMaxSizeDiff=0.0981013;ClusterMaxEditDist=0.265625;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=3:80964876-80964882;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3699.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:45:./.:9:27:16:5:./.:0:0:0:0:0/1:26:12:0/1:9:37:.:.:.
chr3	81189952	HG3_Ill_GATKHC_5710	A	AAGGAAGGAAGGAAGGAAGGGAGGGAGAATGAGGAAGGAAGGAAGGAAGAAAGGAAGGAAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGGAGGGAGGG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_2581:HG3_PB_pbsv_3370:HG2_PB_pbsv_3430:HG4_PB_assemblyticsfalcon_17424:HG4_PB_SVrefine2Falcon1Dovetail_2067:HG3_Ill_SVrefine2DISCOVARDovetail_2568:HG3_PB_HySA_5289:HG3_Ill_GATKHC_5710:HG4_PB_pbsv_3434:HG2_PB_SVrefine2Falcon2Bionano_1572:HG2_PB_HySA_6486;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1572:HG3_Ill_GATKHC_5710:HG3_Ill_SVrefine2DISCOVARDovetail_2568;NumExactMatchSVs=3;ClusterMaxShiftDist=0.14433;ClusterMaxSizeDiff=0.14433;ClusterMaxEditDist=0.324607;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=98;DistBack=79022;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=154;REFWIDENED=3:81189953-81190106;PctSeqSimilarity=0.9802;PctSizeSimilarity=0.9608;PctRecOverlap=0.9612;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=3700.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:41:./.:24:17:4:14:./.:0:0:0:0:0/1:9:24:./.:.:.:.:.:.
chr3	82056134	HG2_Ill_breakscan11_3331	T	ATGAATATCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3331:HG2_PB_pbsv_3434:HG4_PB_pbsv_3437:HG4_PB_assemblyticsfalcon_17430:HG2_PB_assemblyticsfalcon_17834:HG2_PB_HySA_6493:HG2_PB_PB10Xdip_21035:HG2_PB_SVrefine2PB10Xhap12_2510:HG4_PB_SVrefine2Falcon1Dovetail_2069:HG2_Ill_MetaSV_3267:HG2_PB_SVrefine2Falcon1plusDovetail_8069:HG4_Ill_MetaSV_3410:HG4_PB_HySA_5118;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_breakscan11_3331;NumExactMatchSVs=1;ClusterMaxShiftDist=0.279461;ClusterMaxSizeDiff=0.279461;ClusterMaxEditDist=0.313131;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=90377;DistForward=10694;DistMin=10694;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:82056135-82056133;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3701.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:49:0|1:35:0:1:39:./.:0:0:0:0:0/1:21:11:0/1:6:16:.:.:.
chr3	82710120	HG2_PB_SVrefine2Falcon2Bionano_1578	A	AATACGCTTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTAATTATTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGATATATCTCCCAATGCTATCCCTCCCCACTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTGCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGTGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCGGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTGGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8072:HG2_PB_pbsv_3439:HG2_PB_HySA_6499:HG3_PB_pbsv_3377:HG2_PB_HySA_6498:HG2_PB_PB10Xdip_21044:HG2_Ill_breakscan11_3332:HG2_PB_SVrefine2PB10Xhap12_2513:HG3_PB_SVrefine2Falcon1Dovetail_2134:HG2_PB_SVrefine2Falcon2Bionano_1578:HG4_PB_SVrefine2Falcon1Dovetail_2073:HG3_PB_HySA_5302;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1578;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0821918;ClusterMaxEditDist=0.216199;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=1550;DistBack=57531;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=3:82710121-82710137;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:45:49:1|0:4:32:37:1:./.:0:0:0:0:0/1:31:11:0/1:49:234:.:1550:.
chr3	83102401	HG2_Ill_FB_3111	A	ATATATATTATATATATATATATTATATATATATATTATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_2579:HG4_PB_HySA_5130:HG3_PB_HySA_5316:HG4_Ill_scalpel_3245:HG3_PB_assemblyticsfalcon_17750:HG4_Ill_Krunchall_4982:HG4_Ill_GATKHC_5698:HG4_Ill_GATKHCSBGrefine_2388:HG4_Ill_FB_3131:HG4_Ill_250bpfermikitraw_4766:HG4_Ill_150bpfermikitraw_4533:HG2_Ill_150bpfermikitraw_4367:HG3_Ill_scalpel_3471:HG3_Ill_Spiral_3721:HG3_Ill_GATKHC_5727:HG3_Ill_GATKHCSBGrefine_2314:HG3_Ill_FB_3111:HG2_Ill_scalpel_3343:HG2_Ill_manta_971:HG2_Ill_Krunchall_4781:HG2_Ill_GATKHC_5634:HG2_Ill_GATKHCSBGrefine_2305:HG2_Ill_FB_3111:HG3_Ill_Krunchall_4756:HG2_PB_PB10Xdip_21054:HG2_PB_PB10Xdip_21053:HG2_PB_HySA_6505:HG4_PB_pbsv_3449:HG4_PB_SVrefine2PBcRDovetail_1788:HG3_PB_pbsv_3381:HG2_PB_SVrefine2Falcon1plusDovetail_8074:HG2_PB_pbsv_3446:HG4_Ill_SVrefine2DISCOVARDovetail_2590:HG2_Ill_SVrefine2DISCOVARplusDovetail_8641:HG4_PB_SVrefine2Falcon1Dovetail_2077:HG2_PB_SVrefine2PBcRplusDovetail_7469:HG2_PB_SVrefine2PB10Xhap12_2517:HG2_PB_SVrefine2Falcon2Bionano_1581;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_FB_3111:HG2_Ill_GATKHCSBGrefine_2305:HG2_Ill_GATKHC_5634:HG2_Ill_Krunchall_4781:HG2_Ill_manta_971:HG2_Ill_scalpel_3343:HG3_Ill_FB_3111:HG3_Ill_GATKHCSBGrefine_2314:HG3_Ill_GATKHC_5727:HG3_Ill_Spiral_3721:HG3_Ill_scalpel_3471;NumExactMatchSVs=11;ClusterMaxShiftDist=0.243902;ClusterMaxSizeDiff=0.243902;ClusterMaxEditDist=0.260163;PBcalls=15;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=-16;DistForward=30525;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=7;REFWIDENED=3:83102400-83102409;PctSeqSimilarity=0.9748;PctSizeSimilarity=0.95;PctRecOverlap=0.9344;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=3704.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:55:1/1:3:11:2:15:./.:0:0:0:0:1/1:1:28:./.:.:.:.:.:.
chr3	83304065	HG2_Ill_SVrefine2DISCOVARplusDovetail_8642	T	TAACACGGTGAAACCCCCGTCTCTACTAAAAAAAATACAAAAAATTAGCCGGACTTGGTGACGAGCACCTGTAGTCCCAGCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTTCAGTGAGCCG	20	PASS	ClusterIDs=HG3_PB_pbsv_3382:HG4_PB_assemblyticsfalcon_17442:HG2_PB_pbsv_3447:HG3_PB_assemblyticsfalcon_17752:HG2_PB_assemblyticsfalcon_17848:HG4_PB_pbsv_3450:HG3_PB_HySA_5318:HG2_PB_HySA_6507:HG4_PB_SVrefine2PBcRDovetail_1789:HG4_PB_SVrefine2Falcon1Dovetail_2078:HG4_Ill_SVrefine2DISCOVARDovetail_2592:HG4_Ill_MetaSV_3413:HG4_Ill_GATKHCSBGrefine_2389:HG3_PB_SVrefine2Falcon1Dovetail_2137:HG3_Ill_Spiral_3723:HG3_Ill_SVrefine2DISCOVARDovetail_2581:HG3_Ill_MetaSV_3444:HG3_Ill_GATKHCSBGrefine_2315:HG2_PB_SVrefine2PBcRplusDovetail_7470:HG2_PB_SVrefine2PB10Xhap12_2518:HG2_PB_SVrefine2Falcon2Bionano_1582:HG2_PB_SVrefine2Falcon1plusDovetail_8075:HG2_Ill_manta_972:HG2_Ill_SVrefine2DISCOVARplusDovetail_8642:HG2_Ill_MetaSV_3269:HG2_Ill_GATKHCSBGrefine_2306:HG2_10X_SVrefine210Xhap12_2553:HG4_PB_HySA_5132:HG2_PB_PB10Xdip_21056:HG2_PB_PB10Xdip_21055;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2553:HG2_Ill_GATKHCSBGrefine_2306:HG2_Ill_MetaSV_3269:HG2_Ill_SVrefine2DISCOVARplusDovetail_8642:HG2_Ill_manta_972:HG2_PB_SVrefine2Falcon1plusDovetail_8075:HG2_PB_SVrefine2Falcon2Bionano_1582:HG2_PB_SVrefine2PB10Xhap12_2518:HG2_PB_SVrefine2PBcRplusDovetail_7470:HG3_Ill_GATKHCSBGrefine_2315:HG3_Ill_MetaSV_3444:HG3_Ill_SVrefine2DISCOVARDovetail_2581:HG3_Ill_Spiral_3723:HG3_PB_SVrefine2Falcon1Dovetail_2137:HG4_Ill_GATKHCSBGrefine_2389:HG4_Ill_MetaSV_3413:HG4_Ill_SVrefine2DISCOVARDovetail_2592:HG4_PB_SVrefine2Falcon1Dovetail_2078:HG4_PB_SVrefine2PBcRDovetail_1789;NumExactMatchSVs=19;ClusterMaxShiftDist=0.064982;ClusterMaxSizeDiff=0.0567376;ClusterMaxEditDist=0.303887;PBcalls=18;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=137;DistBack=58928;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:83304066-83304066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3706.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:64:1/1:1:16:0:16:./.:0:0:0:0:1/1:0:25:./.:.:.:.:.:.
chr3	83756660	HG2_PB_SVrefine2Falcon2Bionano_1583	C	CCAGTCTATCCTTGATGGGCATTTAGGTTGGTTCCATGTCTCTGCTATTGTAAATAATGCTGCAATAAACATATGTGTGCATGTATCTTTATAGTAGAATGATTTATTTTCATTTGGGTATATACCTAGCAAGGGGATTGCTGGGTCAAATGGTATTTCTCTTTCTAGATCCTTGCGGAATCGCCATACTATCTTCCACAATGGTTGAACTAATTTACATTCCCACCAACAGTGTAAAGGCCTTCCTATTTCTTCA	20	PASS	ClusterIDs=HG3_PB_pbsv_3384:HG4_PB_SVrefine2PBcRDovetail_1790:HG4_PB_pbsv_3452:HG4_PB_SVrefine2Falcon1Dovetail_2079:HG4_Ill_svaba_4373:HG4_Ill_SVrefine2DISCOVARDovetail_2595:HG4_Ill_MetaSV_3414:HG4_Ill_GATKHCSBGrefine_2393:HG3_PB_SVrefine2Falcon1Dovetail_2138:HG3_Ill_svaba_4397:HG3_Ill_manta_771:HG3_Ill_SVrefine2DISCOVARDovetail_2586:HG3_Ill_MetaSV_3445:HG3_Ill_GATKHCSBGrefine_2319:HG2_PB_SVrefine2PBcRplusDovetail_7471:HG2_PB_SVrefine2PB10Xhap12_2519:HG2_PB_SVrefine2Falcon2Bionano_1583:HG2_PB_SVrefine2Falcon1plusDovetail_8076:HG2_Ill_svaba_4286:HG2_Ill_SVrefine2DISCOVARplusDovetail_8644:HG2_Ill_MetaSV_3270:HG2_Ill_GATKHCSBGrefine_2310:HG2_10X_SVrefine210Xhap12_2555:HG4_PB_HySA_5139:HG2_PB_pbsv_3449:HG2_PB_PB10Xdip_21060:HG2_PB_PB10Xdip_21059:HG2_Ill_breakscan11_3334:HG4_PB_assemblyticsfalcon_17447:HG3_PB_assemblyticsfalcon_17757:HG2_PB_assemblyticsfalcon_17854;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2555:HG2_Ill_GATKHCSBGrefine_2310:HG2_Ill_MetaSV_3270:HG2_Ill_SVrefine2DISCOVARplusDovetail_8644:HG2_Ill_svaba_4286:HG2_PB_SVrefine2Falcon1plusDovetail_8076:HG2_PB_SVrefine2Falcon2Bionano_1583:HG2_PB_SVrefine2PB10Xhap12_2519:HG2_PB_SVrefine2PBcRplusDovetail_7471:HG3_Ill_GATKHCSBGrefine_2319:HG3_Ill_MetaSV_3445:HG3_Ill_SVrefine2DISCOVARDovetail_2586:HG3_Ill_manta_771:HG3_Ill_svaba_4397:HG3_PB_SVrefine2Falcon1Dovetail_2138:HG4_Ill_GATKHCSBGrefine_2393:HG4_Ill_MetaSV_3414:HG4_Ill_SVrefine2DISCOVARDovetail_2595:HG4_Ill_svaba_4373:HG4_PB_SVrefine2Falcon1Dovetail_2079:HG4_PB_SVrefine2PBcRDovetail_1790;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0726577;ClusterMaxSizeDiff=0.0726577;ClusterMaxEditDist=0.223062;PBcalls=16;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=255;DistBack=13954;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:83756661-83756663;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:88:1/1:1:32:0:27:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr3	84593273	HG2_PB_SVrefine2PBcRplusDovetail_7474	G	GAAGTATGGCCATTTTTTTTTTTTTTTTTTTTTTTTTATTGTTTGCCATCTTAATTTCTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGACTCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAAATGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTCCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3335:HG4_PB_pbsv_3457:HG2_PB_pbsv_3454:HG2_PB_PB10Xdip_21066:HG2_PB_assemblyticsfalcon_17863:HG4_PB_assemblyticsfalcon_17455:HG4_PB_SVrefine2Falcon1Dovetail_2082:HG2_PB_SVrefine2Falcon2Bionano_1586:HG4_PB_SVrefine2PBcRDovetail_1793:HG2_PB_SVrefine2PBcRplusDovetail_7474:HG2_PB_SVrefine2PB10Xhap12_2524:HG2_PB_SVrefine2Falcon1plusDovetail_8080:HG4_PB_HySA_5147:HG2_PB_HySA_6522;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7474;NumExactMatchSVs=1;ClusterMaxShiftDist=0.247387;ClusterMaxSizeDiff=0.247387;ClusterMaxEditDist=0.27439;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1159;DistBack=26817;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:84593274-84593288;PctSeqSimilarity=0.9987;PctSizeSimilarity=0.9974;PctRecOverlap=0.9966;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3708.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:41:./.:5:19:18:9:./.:0:0:0:0:0/1:27:13:0/1:46:159:.:.:.
chr3	85261974	HG2_Ill_250bpfermikitraw_4723	T	TTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	20	PASS	ClusterIDs=HG3_Ill_GATKHCSBGrefine_2322:HG4_PB_assemblyticsfalcon_17462:HG4_PB_SVrefine2Falcon1Dovetail_2084:HG3_PB_pbsv_3389:HG3_PB_assemblyticsfalcon_17772:HG3_PB_SVrefine2Falcon1Dovetail_2142:HG2_PB_HySA_6532:HG3_PB_HySA_5337:HG2_PB_assemblyticsfalcon_17871:HG2_PB_SVrefine2Falcon1plusDovetail_8083:HG2_PB_SVrefine2PB10Xhap12_2529:HG2_PB_PB10Xdip_21070:HG2_PB_PB10Xdip_21069:HG2_PB_SVrefine2PB10Xhap12_2528:HG2_PB_SVrefine2Falcon2Bionano_1588:HG4_PB_SVrefine2PBcRDovetail_1796:HG4_Ill_SVrefine2DISCOVARDovetail_2603:HG3_Ill_GATKHC_5752:HG3_Ill_GATKHCSBGrefine_2323:HG3_Ill_250bpfermikitraw_4644:HG3_Ill_150bpfermikitraw_4492:HG2_Ill_250bpfermikitraw_4723:HG4_PB_pbsv_3460:HG3_Ill_GATKHC_5751;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4723:HG3_Ill_150bpfermikitraw_4492:HG3_Ill_250bpfermikitraw_4644;NumExactMatchSVs=3;ClusterMaxShiftDist=0.349206;ClusterMaxSizeDiff=0.349206;ClusterMaxEditDist=0.349206;PBcalls=16;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=78;DistBack=0;DistForward=10;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=87;REFWIDENED=3:85261961-85262047;PctSeqSimilarity=0.9753;PctSizeSimilarity=0.9512;PctRecOverlap=0.9518;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=95;MatchId=3709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:1:20:2:13:./.:0:0:0:0:0/1:3:25:./.:.:.:.:.:.
chr3	86264938	HG2_PB_SVrefine2PBcRplusDovetail_7481	T	TTCTTATATTTTTTTTTTTTTTTTTTTTTTTTCGTATTCTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGTGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACCTTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTACAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAATAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGCTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_21071:HG2_PB_pbsv_3462:HG2_PB_SVrefine2Falcon2Bionano_1591:HG2_PB_SVrefine2PBcRplusDovetail_7481:HG2_PB_HySA_6539:HG2_PB_SVrefine2PB10Xhap12_2534;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7481;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0378676;ClusterMaxSizeDiff=0.0378676;ClusterMaxEditDist=0.102186;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=3653;DistBack=9013;DistForward=32474;DistMin=9013;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=3:86264939-86264950;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9986;PctRecOverlap=0.9984;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3711.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:41:./.:14:16:20:7:./.:0:0:0:0:0/1:22:9:0/1:149:470:.:3702:.
chr3	87365215	HG4_Ill_150bpfermikitraw_4576	T	TTACATGTATGATTACATGTATGATTACATGTATGAATACATGTATGATTACATGTATGATTACATGTATGAA	20	PASS	ClusterIDs=HG4_PB_HySA_5166:HG4_PB_pbsv_3465:HG4_Ill_svaba_4410:HG4_Ill_Krunchall_5029:HG4_Ill_GATKHCSBGrefine_2401:HG4_Ill_250bpfermikitraw_4815:HG4_Ill_150bpfermikitraw_4576:HG2_Ill_svaba_4327:HG2_Ill_Krunchall_4834:HG2_Ill_GATKHCSBGrefine_2317:HG2_Ill_250bpfermikitraw_4752:HG2_Ill_150bpfermikitraw_4414;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4414:HG2_Ill_250bpfermikitraw_4752:HG2_Ill_GATKHCSBGrefine_2317:HG2_Ill_Krunchall_4834:HG2_Ill_svaba_4327:HG4_Ill_150bpfermikitraw_4576:HG4_Ill_250bpfermikitraw_4815:HG4_Ill_GATKHCSBGrefine_2401:HG4_Ill_Krunchall_5029:HG4_Ill_svaba_4410;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.027027;ClusterMaxEditDist=0.175676;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=29589;DistForward=39;DistMin=39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=63;REFWIDENED=3:87365210-87365272;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3712.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:22:1|0:2:13:35:0:./.:0:0:0:0:0/1:21:24:./.:.:.:.:.:.
chr3	87520468	HG2_PB_SVrefine2Falcon1plusDovetail_8089	T	TAAGAGATAAAGTTGGTTGGGAAGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_6549:HG3_PB_pbsv_3401:HG2_PB_pbsv_3468:HG2_PB_assemblyticsfalcon_17893:HG3_PB_assemblyticsfalcon_17794:HG3_PB_HySA_5357:HG2_PB_SVrefine2Falcon2Bionano_1593:HG2_PB_SVrefine2Falcon1plusDovetail_8089:HG2_Ill_MetaSV_3276:HG3_PB_SVrefine2Falcon1Dovetail_2148;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8089:HG2_PB_SVrefine2Falcon2Bionano_1593;NumExactMatchSVs=2;ClusterMaxShiftDist=0.138544;ClusterMaxSizeDiff=0.138544;ClusterMaxEditDist=0.191829;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=282;DistBack=71625;DistForward=23355;DistMin=23355;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:87520469-87520483;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9965;PctRecOverlap=0.9929;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3713.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:47:0|1:38:0:0:34:./.:0:0:0:0:0/1:26:4:./.:.:.:.:.:.
chr3	88478154	HG2_PB_pbsv_3471	A	AAATTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACGGCATCCCGGCTAAACGGTGAAACCCCGTCTCTACTAAATACAAAAAATTAGCGCGGGCGTCCGTGGCGGGCGCCTGTAGTCCCCAGGCTACTTGGGAGGCTGAGGCAGGAGACTGGCGTGAACCCGGGAGGCGGAGCTTGAGTGAGCCGAGATCGGCGCCACACTGGCACTCCAGCCTGGCGACAGAGCGAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3336:HG3_PB_pbsv_3405:HG3_PB_HySA_5367:HG2_PB_pbsv_3471:HG2_PB_HySA_6561:HG4_PB_pbsv_3469:HG4_PB_HySA_5178:HG4_PB_assemblyticsfalcon_17494:HG3_PB_SVrefine2Falcon1Dovetail_2151:HG2_Ill_GATKHCSBGrefine_2327:HG3_Ill_GATKHCSBGrefine_2343:HG4_PB_SVrefine2Falcon1Dovetail_2093:HG2_PB_SVrefine2Falcon1plusDovetail_8091;NumClusterSVs=13;ExactMatchIDs=HG2_PB_pbsv_3471;NumExactMatchSVs=1;ClusterMaxShiftDist=0.171527;ClusterMaxSizeDiff=0.171527;ClusterMaxEditDist=0.263699;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=294;DistBack=-63;DistForward=2;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=3:88478143-88478162;PctSeqSimilarity=0.9515;PctSizeSimilarity=0.9866;PctRecOverlap=0.9532;SizeDiff=-4;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=96;MatchId=3714.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:22:29:./.:6:10:14:11:./.:0:0:0:0:0/1:29:4:./.:.:.:.:.:.
chr3	88694844	HG3_Ill_GATKHC_5795	T	TATATATAAATATATATATTTAAATATATAACTATATATATTTATATATAACTATATATATTTATATATAA	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_4434:HG3_Ill_svaba_4457:HG3_Ill_GATKHC_5795:HG3_Ill_GATKHCSBGrefine_2345:HG3_Ill_250bpfermikitraw_4683:HG2_Ill_svaba_4346:HG2_Ill_GATKHC_5704:HG2_Ill_GATKHCSBGrefine_2329:HG2_Ill_250bpfermikitraw_4770;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4434:HG3_Ill_svaba_4457:HG3_Ill_GATKHC_5795:HG3_Ill_GATKHCSBGrefine_2345:HG3_Ill_250bpfermikitraw_4683:HG2_Ill_svaba_4346:HG2_Ill_GATKHC_5704:HG2_Ill_GATKHCSBGrefine_2329:HG2_Ill_250bpfermikitraw_4770;NumExactMatchSVs=9;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=70;DistBack=39;DistForward=88;DistMin=39;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=234;REFWIDENED=3:88694717-88694950;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3715.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:27:0|1:26:1:2:26:./.:0:0:0:0:0/1:17:17:./.:.:.:.:.:.
chr3	89022330	HG3_PB_SVrefine2Falcon1Dovetail_2153	T	TAGAAGTGGCATGTTTATTTTTTTTTTCTTTTTTTTTCTTTCTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATAGGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCTCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATCAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAAGCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGAGACTTTAACACCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAAAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCTATTCCAAAATTGACCACATACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTTCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACAAGAACAAAGACACCACATACCAGAATCTCTGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGATCTGGTTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAAGAGAAGAATCAAATAGACACAATAAAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAGGAGGAACTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGACACCAAAGCCGGCAGAGACACAACCAAAAAAGGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCACACAACCCTTCATGCTAAAAACTCATAAATTAGGTATTGATGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGAAGCATTCCCTTTGAAAAGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAATCACAAGCATTCTTATACAACCAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAAGGACCTCTCA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_21114:HG4_PB_pbsv_3471:HG4_PB_assemblyticsfalcon_17501:HG3_PB_assemblyticsfalcon_17805:HG4_PB_SVrefine2PBcRDovetail_1801:HG2_PB_SVrefine2PB10Xhap12_2540:HG2_PB_SVrefine2PBcRplusDovetail_7486:HG4_PB_SVrefine2Falcon1Dovetail_2094:HG3_PB_SVrefine2Falcon1Dovetail_2153:HG2_PB_SVrefine2Falcon1plusDovetail_8092:HG4_PB_HySA_5182;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2153;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0667145;ClusterMaxSizeDiff=0.0667145;ClusterMaxEditDist=0.137494;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=4065;DistBack=74040;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:89022331-89022346;PctSeqSimilarity=0.9947;PctSizeSimilarity=0.9941;PctRecOverlap=0.9941;SizeDiff=-24;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3716.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:56:./.:26:13:9:24:./.:0:0:0:0:0/1:28:14:0/1:142:387:.:3956:.
chr3	93762378	HG3_PB_SVrefine2PBcRDovetail_1591	G	GCCCTCCCCCTCCTCCCCCTCCCCCTCCCCCCTCCTCCCCCTTCCCCTCCCTCCCCCTCCCTCCCCCTCCCCCTCCCCCTCCCTCCCCCTTCCCCTCCCCCTCCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCTCCCCCTCCCCCTCCCCCTCCCCCCCCTCCCCCCTCCCCCTCCCTCCCCCTCC	10	PASS	ClusterIDs=HG2_PB_pbsv_3479:HG2_PB_SVrefine2PBcRplusDovetail_7490:HG2_PB_PB10Xdip_21142:HG2_PB_SVrefine2Falcon2Bionano_1597:HG2_PB_HySA_6576:HG3_PB_HySA_5382:HG4_PB_pbsv_3480:HG4_PB_SVrefine2Falcon1Dovetail_2100:HG3_PB_SVrefine2Falcon1Dovetail_2158:HG4_PB_SVrefine2PBcRDovetail_1803:HG3_PB_SVrefine2PBcRDovetail_1591:HG2_PB_SVrefine2PB10Xhap12_2544:HG3_PB_pbsv_3412;NumClusterSVs=13;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_1591;NumExactMatchSVs=1;ClusterMaxShiftDist=0.240896;ClusterMaxSizeDiff=0.240896;ClusterMaxEditDist=0.276423;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=192;DistBack=5018;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=125;REFWIDENED=3:93762379-93762503;PctSeqSimilarity=0.9902;PctSizeSimilarity=0.9897;PctRecOverlap=0.9385;SizeDiff=-2;StartDistance=-11;EndDistance=-11;GTMatch=1;TruScore=97;MatchId=3717.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:34:1/1:2:21:0:5:./.:0:0:0:0:./.:0:6:./.:.:.:.:.:.
chr3	94179224	HG3_Ill_250bpfermikitraw_4694	T	TTTATTAGTAGTCACTAGTAATTTTATTAGTAATTTTATTATTTAACTAGTAATTTTATTAGTAGTCACTAGTAAC	20	PASS	ClusterIDs=HG4_PB_pbsv_3481:HG4_Ill_manta_833:HG4_Ill_svaba_4434:HG4_Ill_Krunchall_5062:HG4_Ill_GATKHC_5796:HG4_Ill_GATKHCSBGrefine_2418:HG4_Ill_250bpfermikitraw_4851:HG4_Ill_150bpfermikitraw_4611:HG3_Ill_svaba_4461:HG3_Ill_Spiral_3780:HG3_Ill_Krunchall_4828:HG3_Ill_GATKHC_5804:HG3_Ill_GATKHCSBGrefine_2351:HG3_Ill_250bpfermikitraw_4694:HG3_Ill_150bpfermikitraw_4540:HG2_Ill_svaba_4353:HG2_Ill_SpiralSDKrefine_11245:HG2_Ill_Krunchall_4865:HG2_Ill_GATKHC_5719:HG2_Ill_GATKHCSBGrefine_2332:HG2_Ill_250bpfermikitraw_4784:HG2_Ill_150bpfermikitraw_4445:HG2_PB_PB10Xdip_21143:HG3_Ill_manta_777:HG3_PB_pbsv_3413:HG2_PB_pbsv_3480:HG2_Ill_manta_975;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4445:HG2_Ill_250bpfermikitraw_4784:HG2_Ill_GATKHCSBGrefine_2332:HG2_Ill_GATKHC_5719:HG2_Ill_Krunchall_4865:HG2_Ill_SpiralSDKrefine_11245:HG2_Ill_svaba_4353:HG3_Ill_150bpfermikitraw_4540:HG3_Ill_250bpfermikitraw_4694:HG3_Ill_GATKHCSBGrefine_2351:HG3_Ill_GATKHC_5804:HG3_Ill_Krunchall_4828:HG3_Ill_Spiral_3780:HG3_Ill_svaba_4461:HG4_Ill_150bpfermikitraw_4611:HG4_Ill_250bpfermikitraw_4851:HG4_Ill_GATKHCSBGrefine_2418:HG4_Ill_GATKHC_5796:HG4_Ill_Krunchall_5062:HG4_Ill_svaba_4434;NumExactMatchSVs=20;ClusterMaxShiftDist=0.163522;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.27673;PBcalls=4;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=75;DistBack=-1;DistForward=74569;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=3:94179201-94179229;PctSeqSimilarity=0.9567;PctSizeSimilarity=0.9259;PctRecOverlap=0.6543;SizeDiff=-6;StartDistance=25;EndDistance=25;GTMatch=0;TruScore=84;MatchId=3718.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:57:1/1:1:7:2:15:./.:0:0:0:0:1/1:1:57:./.:.:.:.:.:.
chr3	95502782	HG2_PB_SVrefine2Falcon1plusDovetail_8100	T	TATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATACAACATATAAATATACGTATATTTATAACATCATATAAATATACGTATATTTATAACATCATATAAATATACGTATATTTATAACATCATATAAATATACGTATATTAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATATAAATATACGTATATTTATAACATAAATATACGTATATTTATAAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2103:HG2_PB_SVrefine2Falcon1plusDovetail_8100:HG2_PB_SVrefine2Falcon2Bionano_1599:HG2_PB_SVrefine2PB10Xhap12_2548:HG2_PB_SVrefine2PBcRplusDovetail_7494:HG3_PB_SVrefine2PBcRDovetail_1593:HG3_PB_SVrefine2Falcon1Dovetail_2161;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8100;NumExactMatchSVs=1;ClusterMaxShiftDist=0.286678;ClusterMaxSizeDiff=0.286678;ClusterMaxEditDist=0.286678;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=597;DistBack=-541;DistForward=0;DistMin=-541;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=383;REFWIDENED=3:95502782-95503164;PctSeqSimilarity=0.9801;PctSizeSimilarity=0.9819;PctRecOverlap=0.7833;SizeDiff=-11;StartDistance=-126;EndDistance=-126;GTMatch=1;TruScore=91;MatchId=3719.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:111:1/1:0:29:0:24:./.:0:0:0:0:1/1:0:49:./.:3:23:.:.:.
chr3	95874508	HG2_Ill_MetaSV_3279	C	CAAGAAATGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGACAAGGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3338:HG2_PB_HySA_6600:HG3_PB_pbsv_3421:HG2_PB_HySA_6599:HG2_PB_SVrefine2PB10Xhap12_2550:HG2_PB_PB10Xdip_21155:HG2_PB_pbsv_3486:HG2_PB_SVrefine2Falcon2Bionano_1601:HG2_PB_SVrefine2Falcon1plusDovetail_8102:HG2_Ill_MetaSV_3279:HG3_PB_SVrefine2Falcon1Dovetail_2163;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_MetaSV_3279;NumExactMatchSVs=1;ClusterMaxShiftDist=0.152824;ClusterMaxSizeDiff=0.152824;ClusterMaxEditDist=0.215947;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=311;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=3:95874509-95874517;PctSeqSimilarity=0.9968;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:37:./.:11:21:17:1:./.:0:0:0:0:0/1:25:14:0/1:10:21:.:.:.
chr3	95958729	HG3_Ill_250bpfermikitraw_4708	G	GCTATATATAGCTATACATAACTATATATATAGCTATATATAGCTATACATAA	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_4454:HG3_Ill_Spiral_3789:HG4_Ill_svaba_4448:HG4_Ill_250bpfermikitraw_4869:HG4_Ill_150bpfermikitraw_4628:HG3_Ill_svaba_4475:HG3_Ill_250bpfermikitraw_4708:HG3_Ill_150bpfermikitraw_4553:HG2_Ill_svaba_4361:HG2_Ill_250bpfermikitraw_4796;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4454:HG4_Ill_svaba_4448:HG4_Ill_250bpfermikitraw_4869:HG4_Ill_150bpfermikitraw_4628:HG3_Ill_svaba_4475:HG3_Ill_250bpfermikitraw_4708:HG3_Ill_150bpfermikitraw_4553:HG2_Ill_svaba_4361:HG2_Ill_250bpfermikitraw_4796;NumExactMatchSVs=9;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0188679;PBcalls=0;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=52;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:95958728-95958730;PctSeqSimilarity=0.9178;PctSizeSimilarity=0.8387;PctRecOverlap=0.6825;SizeDiff=-10;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=81;MatchId=3721.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:42:0|1:40:5:3:32:./.:0:0:0:0:0/1:28:15:./.:.:.:.:.:.
chr3	97968395	HG2_Ill_svaba_4375	G	GGTACTTTGTAACATCCTCCCCACCCTTCTGACAATACACCCTCCTTGTCCTTGTGAAT	20	PASS	ClusterIDs=HG2_PB_HySA_6616:HG2_PB_PB10Xdip_21162:HG4_PB_pbsv_3501:HG4_PB_HySA_5224:HG4_Ill_svaba_4463:HG2_PB_pbsv_3494:HG4_Ill_GATKHC_5831:HG4_Ill_GATKHCSBGrefine_2429:HG4_Ill_250bpfermikitraw_4885:HG2_Ill_svaba_4375:HG2_Ill_manta_977:HG2_Ill_Krunchall_4891:HG2_Ill_GATKHC_5750:HG2_Ill_GATKHCSBGrefine_2341:HG2_Ill_250bpfermikitraw_4811;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4811:HG2_Ill_GATKHCSBGrefine_2341:HG2_Ill_GATKHC_5750:HG2_Ill_Krunchall_4891:HG2_Ill_manta_977:HG2_Ill_svaba_4375:HG4_Ill_250bpfermikitraw_4885:HG4_Ill_GATKHCSBGrefine_2429:HG4_Ill_GATKHC_5831:HG4_Ill_svaba_4463;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.208696;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=2429;DistForward=17815;DistMin=2429;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=144;REFWIDENED=3:97968337-97968480;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3722.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:./.:16:5:13:18:./.:0:0:0:0:0/1:18:14:./.:.:.:.:.:.
chr3	98726764	HG2_Ill_GATKHCSBGrefine_2344	A	ACTCACAGAGATGGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATAAAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGACTGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAACAAAAAACAAAAAACAAAAAAAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1601:HG3_PB_HySA_5415:HG4_PB_pbsv_3508:HG2_PB_pbsv_3500:HG3_PB_pbsv_3434:HG2_Ill_breakscan11_3340:HG3_PB_HySA_5414:HG4_PB_HySA_5230:HG2_PB_HySA_6622:HG2_PB_SVrefine2Falcon2Bionano_1608:HG2_PB_SVrefine2Falcon1plusDovetail_8110:HG3_Ill_MetaSV_3459:HG3_Ill_GATKHCSBGrefine_2361:HG4_Ill_MetaSV_3428:HG4_Ill_GATKHCSBGrefine_2432:HG2_Ill_MetaSV_3284:HG2_Ill_GATKHCSBGrefine_2344:HG4_PB_SVrefine2Falcon1Dovetail_2110:HG3_PB_SVrefine2Falcon1Dovetail_2172:HG4_PB_SVrefine2PBcRDovetail_1813;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2344:HG2_Ill_MetaSV_3284:HG4_Ill_GATKHCSBGrefine_2432:HG4_Ill_MetaSV_3428;NumExactMatchSVs=4;ClusterMaxShiftDist=0.129952;ClusterMaxSizeDiff=0.129952;ClusterMaxEditDist=0.178737;PBcalls=13;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=3;DistForward=11;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:98726761-98726776;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3723.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:38:0|1:27:0:1:31:./.:0:0:0:0:0/1:19:10:0/1:8:22:.:.:.
chr3	98966282	HG2_Ill_250bpfermikitraw_4819	T	TAAAAGCTAACAAGAAAACAAACAGTCCCATGGAAAACTAATGAATGACTTAGAGAAATAATTAATTA	20	PASS	ClusterIDs=HG2_PB_pbsv_3502:HG2_PB_HySA_6626:HG4_PB_pbsv_3511:HG2_PB_SVrefine2PBcRplusDovetail_7503:HG4_PB_HySA_5231:HG4_Ill_svaba_4472:HG4_Ill_manta_839:HG4_Ill_SVrefine2DISCOVARDovetail_2648:HG4_Ill_Krunchall_5102:HG4_Ill_GATKHC_5840:HG4_Ill_GATKHCSBGrefine_2435:HG4_Ill_250bpfermikitraw_4893:HG2_Ill_svaba_4384:HG2_Ill_SVrefine2DISCOVARplusDovetail_8697:HG2_Ill_Krunchall_4901:HG2_Ill_GATKHC_5758:HG2_Ill_GATKHCSBGrefine_2346:HG2_Ill_250bpfermikitraw_4819;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4819:HG2_Ill_GATKHCSBGrefine_2346:HG2_Ill_GATKHC_5758:HG2_Ill_Krunchall_4901:HG2_Ill_SVrefine2DISCOVARplusDovetail_8697:HG2_Ill_svaba_4384:HG4_Ill_250bpfermikitraw_4893:HG4_Ill_GATKHCSBGrefine_2435:HG4_Ill_GATKHC_5840:HG4_Ill_Krunchall_5102:HG4_Ill_SVrefine2DISCOVARDovetail_2648:HG4_Ill_manta_839:HG4_Ill_svaba_4472;NumExactMatchSVs=13;ClusterMaxShiftDist=0.138462;ClusterMaxSizeDiff=0.123077;ClusterMaxEditDist=0.248175;PBcalls=5;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=1695;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=72;REFWIDENED=3:98966283-98966354;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3724.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:39:./.:18:22:21:3:./.:0:0:0:0:0/1:27:32:./.:.:.:.:.:.
chr3	99655331	HG3_PB_SVrefine2PBcRDovetail_1604	T	TGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCACCACCACACCCAGCTAATTTTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2177:HG2_PB_pbsv_3507:HG4_PB_pbsv_3516:HG2_PB_HySA_6636:HG2_PB_SVrefine2PBcRplusDovetail_7507:HG3_PB_HySA_5424:HG3_PB_pbsv_3438:HG4_PB_SVrefine2Falcon1Dovetail_2115:HG3_PB_SVrefine2PBcRDovetail_1604:HG2_PB_SVrefine2Falcon1plusDovetail_8116;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_1604:HG4_PB_SVrefine2Falcon1Dovetail_2115;NumExactMatchSVs=2;ClusterMaxShiftDist=0.213166;ClusterMaxSizeDiff=0.206897;ClusterMaxEditDist=0.247649;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=330;DistBack=-54;DistForward=-1;DistMin=-54;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=3:99655332-99655399;PctSeqSimilarity=0.9857;PctSizeSimilarity=1;PctRecOverlap=0.8399;SizeDiff=0;StartDistance=-53;EndDistance=-53;GTMatch=0;TruScore=94;MatchId=3725.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:51:0|1:20:3:0:37:./.:0:0:0:0:0/1:18:7:0/1:3:22:.:.:.
chr3	100170600	HG2_Ill_svaba_4394	A	ATCCTAGAAGGCATTCTCATGAGGACCAGGAATTCCGATGCCGATCGTCTGACCGTCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2604:HG4_Ill_svaba_4479:HG4_PB_pbsv_3518:HG4_Ill_manta_845:HG4_Ill_Krunchall_5115:HG4_Ill_GATKHC_5850:HG4_Ill_GATKHCSBGrefine_2442:HG4_Ill_Cortex_2415:HG4_Ill_250bpfermikitraw_4904:HG4_Ill_150bpfermikitraw_4660:HG2_Ill_svaba_4394:HG2_Ill_manta_982:HG2_Ill_Krunchall_4914:HG2_Ill_GATKHC_5772:HG2_Ill_GATKHCSBGrefine_2355:HG2_Ill_Cortex_5709:HG2_Ill_250bpfermikitraw_4831:HG2_Ill_150bpfermikitraw_4489:HG2_PB_HySA_6639:HG2_Ill_breakscan11_3341:HG4_Ill_SVrefine2DISCOVARDovetail_2659:HG2_PB_SVrefine2PB10Xhap12_2565:HG2_PB_SVrefine2Falcon2Bionano_1613:HG2_PB_SVrefine2Falcon1plusDovetail_8117;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4489:HG2_Ill_250bpfermikitraw_4831:HG2_Ill_Cortex_5709:HG2_Ill_GATKHCSBGrefine_2355:HG2_Ill_GATKHC_5772:HG2_Ill_Krunchall_4914:HG2_Ill_manta_982:HG2_Ill_svaba_4394:HG4_Ill_150bpfermikitraw_4660:HG4_Ill_250bpfermikitraw_4904:HG4_Ill_Cortex_2415:HG4_Ill_GATKHCSBGrefine_2442:HG4_Ill_GATKHC_5850:HG4_Ill_Krunchall_5115:HG4_Ill_manta_845:HG4_Ill_svaba_4479;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0695652;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.206897;PBcalls=5;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=57;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=57;REFWIDENED=3:100170586-100170642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3726.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:0|1:31:1:1:22:./.:0:0:0:0:0/1:31:30:./.:.:.:.:.:.
chr3	100177251	HG2_PB_HySA_6640	T	TAAAAAACCCCCAAAACAGGCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGCGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGAGGCGGAGCTTGCAGTGAGCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_6640:HG4_PB_HySA_5236:HG2_PB_pbsv_3510:HG4_PB_pbsv_3519:HG3_PB_SVrefine2Falcon1Dovetail_2178:HG2_PB_SVrefine2Falcon2Bionano_1614:HG2_Ill_MetaSV_3289:HG4_Ill_MetaSV_3433:HG2_PB_SVrefine2Falcon1plusDovetail_8118:HG4_PB_SVrefine2Falcon1Dovetail_2116;NumClusterSVs=10;ExactMatchIDs=HG2_PB_HySA_6640;NumExactMatchSVs=1;ClusterMaxShiftDist=0.142149;ClusterMaxSizeDiff=0.138158;ClusterMaxEditDist=0.210526;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=310;DistBack=6622;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:100177252-100177266;PctSeqSimilarity=0.9856;PctSizeSimilarity=0.9904;PctRecOverlap=0.9936;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3727.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:29:0|1:30:0:1:21:./.:0:0:0:0:0/1:35:12:0/1:8:22:.:.:.
chr3	101399557	HG2_Ill_manta_984	T	TCAGGCTGGTCTTGAACTCCTGAGCTCAAGTGATCACCTGGCTTTGGTCTTACAAATGCTGGGATTA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_4843:HG4_PB_HySA_5244:HG4_Ill_svaba_4492:HG4_PB_pbsv_3524:HG2_Ill_svaba_4404:HG2_PB_HySA_6649:HG2_PB_SVrefine2Falcon2Bionano_1616:HG2_PB_pbsv_3515:HG4_Ill_Krunchall_5131:HG4_Ill_GATKHC_5864:HG4_Ill_GATKHCSBGrefine_2445:HG4_Ill_250bpfermikitraw_4918:HG2_Ill_manta_984:HG2_Ill_SVrefine2DISCOVARplusDovetail_8708:HG2_Ill_Krunchall_4926:HG2_Ill_GATKHC_5784:HG2_Ill_GATKHCSBGrefine_2359;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4843:HG4_Ill_Krunchall_5131:HG4_Ill_GATKHC_5864:HG4_Ill_GATKHCSBGrefine_2445:HG4_Ill_250bpfermikitraw_4918:HG2_Ill_manta_984:HG2_Ill_SVrefine2DISCOVARplusDovetail_8708:HG2_Ill_Krunchall_4926:HG2_Ill_GATKHC_5784:HG2_Ill_GATKHCSBGrefine_2359;NumExactMatchSVs=10;ClusterMaxShiftDist=0.115108;ClusterMaxSizeDiff=0.100719;ClusterMaxEditDist=0.335664;PBcalls=5;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=22035;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=71;REFWIDENED=3:101399558-101399628;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3728.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:32:./.:18:7:7:6:./.:0:0:0:0:0/1:20:25:./.:.:.:.:.:.
chr3	102524958	HG2_Ill_FB_3201	T	TTATATATATATATATATATCTATATATATATCTATATATATATATATATCTATATATATATCTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2608:HG4_PB_pbsv_3529:HG4_PB_HySA_5256:HG2_PB_HySA_6661:HG2_PB_pbsv_3518:HG4_Ill_250bpfermikitraw_4929:HG4_Ill_150bpfermikitraw_4681:HG2_Ill_manta_985:HG2_Ill_Krunchall_4934:HG2_Ill_GATKHC_5794:HG2_Ill_FB_3201:HG2_Ill_150bpfermikitraw_4507:HG2_Ill_breakscan11_3342:HG2_PB_PB10Xdip_19808:HG4_PB_SVrefine2PBcRDovetail_1825:HG4_Ill_SVrefine2DISCOVARDovetail_2668:HG2_PB_SVrefine2PBcRplusDovetail_7514:HG2_PB_SVrefine2PB10Xhap12_2576:HG2_PB_SVrefine2Falcon2Bionano_1618;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4507:HG2_Ill_FB_3201:HG2_Ill_GATKHC_5794:HG2_Ill_Krunchall_4934:HG2_Ill_manta_985:HG4_Ill_150bpfermikitraw_4681:HG4_Ill_250bpfermikitraw_4929;NumExactMatchSVs=7;ClusterMaxShiftDist=0.141732;ClusterMaxSizeDiff=0.141732;ClusterMaxEditDist=0.23622;PBcalls=9;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=64;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=44;REFWIDENED=3:102524934-102524977;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:47:0|1:18:0:2:42:./.:0:0:0:0:0/1:34:21:./.:.:.:.:.:.
chr3	102856806	HG4_PB_SVrefine2PBcRDovetail_1828	C	CAAATGAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAATAAAATA	10	PASS	ClusterIDs=HG4_PB_pbsv_3534:HG4_PB_SVrefine2PBcRDovetail_1828:HG2_PB_pbsv_3523:HG4_PB_HySA_5263;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_1828;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.229358;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=104;DistBack=8601;DistForward=31948;DistMin=8601;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=92;REFWIDENED=3:102856807-102856898;PctSeqSimilarity=0.9502;PctSizeSimilarity=0.9043;PctRecOverlap=0.913;SizeDiff=-11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=3730.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:34:./.:17:21:24:9:./.:0:0:0:0:0/1:22:19:./.:.:.:.:.:.
chr3	102983847	HG2_Ill_svaba_4410	T	TAAGAATCAATCCCAAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3343:HG2_PB_pbsv_3524:HG3_PB_pbsv_3450:HG2_PB_SVrefine2Falcon2Bionano_1622:HG3_Ill_svaba_4509:HG2_Ill_svaba_4410;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_svaba_4410:HG3_Ill_svaba_4509;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.111111;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=89;DistBack=30914;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=3:102983848-102983858;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3731.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:33:0|1:39:3:4:25:./.:0:0:0:0:0/1:20:7:./.:.:.:.:.:.
chr3	103120898	HG4_PB_SVrefine2PBcRDovetail_1829	A	TGACTTCTTTTCAGTGCATCATATATTTCCTTAGATGTTTTGTGCTTCAGGATGTCCTTCAGTTTCTCTATTTTCTCATACTTTTGAAAGCAAAAGATTTGTAATATCCTCAGTATTGTGCCTCTAGACCTGGTAGACAGATTAAGTCCTGTGAAAAGTTTCTCTATTCTTGACATAACTAGGAGTAAAGGCTTTGTACATAAAATAAAAGAATATATAGAGATTTAAAATAGAAGATAAAATGTAGATCACCAAATACATGAATATTCACAAATCTTTATTTTGTTCATTTACTCTGTCATTTTATTTTTTGAGCTTGTAGCATGTGCCAATGGTCAGCTGAAAATCTAACACAGTCTCTTTTACAGAGAACTCATAGGCTGGATGACAGACTCAAAACCAGCAAGCTATGAGAGTGCAAAGACCTATAGCTGAAAGGGCTGTTCAAGTTCAAGGAAAAGAGTAACTGGATGAAAACATTAGGTTGTTTCTAAAAATTAAATCAAAATTTTAGTTAAGAATACTGTGATTATTTCTTGTTGCATAATTTTCTTAAAGGCTCTGAAAGAAACAAAAAAATACATTTTTTATAGAGACATTTAATGCTAAATTTAGTCCAATTGCTGTTGTTTAACTGTTCAATTCACATCCTATAAAAGTGTCAAATACTTTATAGACAATACTGAAAATATAATATTTAAGTACATACTTTTTCTTTCAATGCATTTTTCACACTTTAAAATGAAGAATCTAGAAATTGTAATTTGAGTTATCTTGTTACTTTATGCCTAGCATAACTCAAGAACTAATGTGTAAAAATTAATAATGTGTATAATCAAGTCTCAATGTTTTAATATTTAACATTCAAATTAGAATAGATAAAAGTAAAAAAAAAATCTTCTCTAATATTTATATTTACTCACTCTTCTCATAGCTCAAGTGTGCACAAACACACATATTTTACTCTATCCAGTTTACCTTACCTCACAGGTAACATTTCAGTTAAGCATGCTGAGATTAACCTTGTTTTTTTTTTTTTTTCAGACTTCCACGATGACACTTTTGCTTCCAGTCTTTTGCATGTTTTCTTAAGGAAAACAAAAACTGTGTCTGGTGTCTTATGCCTAGAAATGGAGTGTTACATGCAGTAGCAAGCTGAATTCAGATTTCTGAACAAAAGATTTGTGATTAGACTTGCTTCTCCTTTATGGACTCTACCTTGGTTTGAGTGCTCTGTTCAATTTGGGATTATAAAAGCCTGAAAGTACTCACAAGGTGAATTTCAATCAATTGAATTTATGATATGTGCGAAGGATAATTTGCTGACAGTTTTAAATTGCAAGCACTTCTTTCCATTGTAAATATAGCCAAATTGCCTTGTTTTCCTCATAAGAGATTTAGCATCTTGAAACAAAGATTTGCTATCAAACACGCTCTCCAGCAAACATCTGCTTCCTGTCTCTAAAGCCCTGATACAGGTGAAATAGAACTTTGGTTATATAAGCTTTGTTTTAAAGCTTTGGTAATGGAGAGGAACTTATTCATTACATTTGTATCAGTAAAAGAATTAACATGCTTCTTAAAAAGTAAAAAATAAAAATATAAAAAGTAAAAACATCAGACTTGTTTTTAAATATATATGTCTATTTGGAGTACAGAATCTGGCCCAATATTAATCTGATACTACATAAATCTAAACAACATGGTAATAAAATATAAGTTGCTCTCATTTTCAAGCTGCTTGAATATTTCTGTTTAGAGCTTCGAGAGAGTCACTAGGTATATATGCATAAAAATATGACCACATATTATCAAAGTTACAGATGTATAGATAATCTCTTCTCTGCAGGGCTCTGTGAGCTATGAATATTCATTTGTCAATATTTATAGAATTATGGAATATTTATTGAAAATACTATGCCAAAAACAGCATATAAACTAACAAACCTGACAACGTACACAAAGTCACCAGTAACCTGGTAAATGCCTTGACATACCATTGGATTAAAAAACATTCAAAATGTGAAAATATTAACTTTAGGAAAGGATGTGGAGCAAATTGGAAGTTTTATGAATTGCTAGTGAGAGTATAAATTGTTACAACCACTTTAGAAAACCACTTGACATTTTCTAGTGAAGATGAAGCTACATGTATAGCTATCGACCCCTAATCATATACCTCAGAGTAACTCTGTCAAATAGGAATATAATTCAATCCTCATATGTGCATTTAAATTTCCTGATAACTACAATTTAAATTTACTATAGCCTCATTTAAAAAATAGATGATACGGGCTGGACGCAGTGGCTCACATCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGAATCACAAGATCAGGAGTTCAAGACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTGCTGGGCTTGGTGGCTGGTGCCTGTAATCCCAGCTACTGGGGAGGCTGAGGCAGAAAACTCCTTGTACTCGGGAGGCGGAGGTTGCAGTGAGCCAAGATAGCGTCACTGAACTCCAGCCTGGGCGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGATACAAAGTTTAATAATATATTTGATTTAACTCATATCTAAAATATTTCAACCTGTAATCATTATGACAGTGTTTATATTACATTATTTTCTGTACTGTCTTCAAAATCCAGTGTGTATTTTATGCTTAGAACACATGTCAATTGGAACAACAATATCCAGGTGTCTGCTGCACTGGACATGCAGCCTTGGAAATTCTTTCATTTGTGAATCAGGAAGCATGCACAAGAATGTTCACAGTGACATTGCTTTTAATAGTCTATATGGGTCTAAGCTGAATTAGTGTAACAGTGCCCTTACCAGTAGCCCTGTAGAGAGAATTTGAAAGAGAAAGCTACATACAATAGTATTAGAAGTGTTGAAAGCCCTCCAAAACAAATGAGAACAATGATTCAACTGAGAGATAAGCAAGAGCAGTAAACAGATACGTCTCTTGGAGCTCGTGGAATAAAAGAAGAATATGGTACTCTTTATGATGAAATCCAAGCTTCTTAGGATTACCTATAGAACTTTTAATGATCTGGCCTCCATATGTCTTTTCATTTTCAAGTCCAAAATATTCCTTACGTCCTCCATATGTCCCAATCATATCAACATACACGCAATTCCCAGAATATGTTCTTTTGGGCTTTTATTTCACACCTGTGTGTCATTGCATATATAGTACAGTTGCTTGAAGTGATCTCTACACACCTCCTGATCACATTCTGCTTTCTCGTACTTCAGGCAGATATAAAATTTTTCAATAAGAAAACTTCCTATCTTCTCCTCACCTCCCACTTGTGTTGGATTACCCACACTTCTATACAACCATAGCACCCCTAAGCATACTCTAATTTATACACTTCTTATGTCTCTTTGTTACATTGGTCTTAATTGTCAGCTTTTCCTTCACTGTAACATGTTTGAGAGGAGGTATTTCTGTAATTGCTCTATCACCAGTTACTGGTACATAGTAGCTACTTAGGAATTAACAACTGAGATGTTAAAAAAAATATTGTAACACAAACATACTTTGAATTAAAATGATTTGGATTACATATGCTTTCCAAAATTATTTTAGTTTTAACTATTGGGACTGTTTGTAATGCCAGATTAGCCAAAACAGAGACAAAGTATAGTGATAATTACATCTAAAAATGAACCCTCCCCACTCATTTAGAAAAATATGGTTTTTAATTTTTACATACATGTATTTATTTATTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAGACTAGTGTGCAATAGCGCAATCTCAGCTCAATGCAACCTCCTCTTCCCAGGTTCAAGCGATTCTCTTGCCTCAGCCTCCCGAGTAGCTGGGGTTACAGGCATGCACCACCACGCCTGGCTAATTTTGTATTTTTAGTAGACACGGGGTTTCTCCATGTTGGTCAGACTGGTCTCGAACTCCCAACCTCAGGTGATTCACCTGCCTCAGCCTCCCAAAATGCTGGGATTACAAGCATAAGCCACCACACCCGGCCATCTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8125:HG3_PB_SVrefine2PBcRDovetail_1614:HG4_Ill_SVrefine2DISCOVARDovetail_2674:HG2_10X_SVrefine210Xhap12_2610:HG4_PB_SVrefine2Falcon1Dovetail_2128:HG2_PB_SVrefine2PBcRplusDovetail_7517:HG2_PB_SVrefine2PB10Xhap12_2579:HG4_PB_SVrefine2PBcRDovetail_1829:HG2_PB_PB10Xdip_19813:HG2_Ill_breakscan11_3344:HG2_PB_HySA_6670:HG2_PB_pbsv_3525:HG4_PB_HySA_5264:HG2_Ill_SVrefine2DISCOVARplusDovetail_8718:HG2_PB_SVrefine2PBcRplusDovetail_7516;NumClusterSVs=15;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_1829;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0764268;ClusterMaxSizeDiff=0.0764268;ClusterMaxEditDist=0.197519;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=4089;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:103120899-103120897;PctSeqSimilarity=0.9972;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3732.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:62:0|1:38:0:3:39:./.:0:0:0:0:0/1:38:13:0/1:147:203:.:3793:.
chr3	103882301	HG3_PB_SVrefine2PBcRDovetail_1617	G	GTGACCAGAAAGAATATATGCAAAATATTTCTATGAACATGAATGTTTGGAGCCATTCAAGGTACTAATACAACTATTTTAAACACACAAAAAGGTTTAGTCAACTTACAAAGATT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2612:HG2_PB_pbsv_3529:HG4_PB_pbsv_3541:HG2_PB_PB10Xdip_19816:HG2_Ill_breakscan11_3347:HG2_PB_HySA_6680:HG4_PB_SVrefine2PBcRDovetail_1832:HG4_PB_SVrefine2Falcon1Dovetail_2133:HG4_Ill_manta_847:HG4_Ill_SVrefine2DISCOVARDovetail_2676:HG4_Ill_MetaSV_3440:HG4_Ill_GATKHCSBGrefine_2454:HG3_PB_SVrefine2PBcRDovetail_1617:HG3_PB_SVrefine2Falcon1Dovetail_2190:HG3_Ill_manta_781:HG3_Ill_Spiral_3836:HG3_Ill_SVrefine2DISCOVARDovetail_2668:HG3_Ill_MetaSV_3470:HG3_Ill_GATKHCSBGrefine_2375:HG3_Ill_250bpfermikitraw_4758:HG3_Ill_150bpfermikitraw_4599:HG2_PB_SVrefine2PBcRplusDovetail_7520:HG2_PB_SVrefine2PB10Xhap12_2582:HG2_PB_SVrefine2Falcon2Bionano_1625:HG2_PB_SVrefine2Falcon1plusDovetail_8128:HG2_Ill_manta_988:HG2_Ill_SVrefine2DISCOVARplusDovetail_8721:HG2_Ill_MetaSV_3297:HG2_Ill_GATKHCSBGrefine_2364;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2612:HG4_PB_SVrefine2PBcRDovetail_1832:HG4_PB_SVrefine2Falcon1Dovetail_2133:HG4_Ill_manta_847:HG4_Ill_SVrefine2DISCOVARDovetail_2676:HG4_Ill_MetaSV_3440:HG4_Ill_GATKHCSBGrefine_2454:HG3_PB_SVrefine2PBcRDovetail_1617:HG3_PB_SVrefine2Falcon1Dovetail_2190:HG3_Ill_manta_781:HG3_Ill_Spiral_3836:HG3_Ill_SVrefine2DISCOVARDovetail_2668:HG3_Ill_MetaSV_3470:HG3_Ill_GATKHCSBGrefine_2375:HG3_Ill_250bpfermikitraw_4758:HG3_Ill_150bpfermikitraw_4599:HG2_PB_SVrefine2PBcRplusDovetail_7520:HG2_PB_SVrefine2PB10Xhap12_2582:HG2_PB_SVrefine2Falcon2Bionano_1625:HG2_PB_SVrefine2Falcon1plusDovetail_8128:HG2_Ill_manta_988:HG2_Ill_SVrefine2DISCOVARplusDovetail_8721:HG2_Ill_MetaSV_3297:HG2_Ill_GATKHCSBGrefine_2364;NumExactMatchSVs=24;ClusterMaxShiftDist=0.042735;ClusterMaxSizeDiff=0.034188;ClusterMaxEditDist=0.126582;PBcalls=12;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=115;DistBack=15;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:103882302-103882304;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:1:32:1:22:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr3	104770940	HG2_PB_SVrefine2PB10Xhap12_2585	A	AGGGAGGGAGGGAGAAAGGAAGGGAGGGAGGGAGAAAGGAAGAGAGGGAGGGAGGGAGAAAGAAGGGAGGGAGGGAGGGAGGAGGGGGAGGGGAGGGGAGGAGGAAGGAGGGAGGGGGGAGGGAGGAGGGGGGAGGAGGAAGGAGGGAGAGGGGAGGGGGGAAGGAAAGATGGAGGGGGGAGGGAGAGGGGGGAGGGAGGGGGCATGGGGAGGGGAGGGAGGGGGAGGGAGGAGGGGGAGGGAGGGGGAGGGAGGGGGGAGGGAGGTGGAGGGAGGGGGAGGGGGAGGGAGGGGGAGGTAGGGGGACAGGGAGGGAGGGGGGAGGGAGGTGGAGGGAGGGAGGGGAGGGGGAGGGAGGGGGGAGGGAGGGGGAGGGAGGGGGAGGGAGGTGGAAGGAGGGGAGGGGGAGGGAGGTGGAGGGAGGGGGACGGAGGGGACGGGGAGGGAGGGGGGAGGGAGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1627:HG4_PB_HySA_5277:HG2_PB_HySA_6683:HG4_PB_pbsv_3544:HG2_PB_SVrefine2Falcon1plusDovetail_8131:HG4_PB_HySA_5276:HG2_PB_PB10Xdip_19819:HG3_PB_SVrefine2Falcon1Dovetail_2194:HG2_PB_SVrefine2PB10Xhap12_2585:HG4_PB_SVrefine2PBcRDovetail_1835:HG2_PB_SVrefine2PBcRplusDovetail_7523:HG2_PB_HySA_6682:HG2_PB_pbsv_3532:HG2_PB_SVrefine2Falcon1plusDovetail_8130:HG4_PB_SVrefine2Falcon1Dovetail_2136:HG3_PB_SVrefine2Falcon1Dovetail_2193;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2585;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0993521;ClusterMaxSizeDiff=0.0993521;ClusterMaxEditDist=0.228509;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=460;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:104770941-104770956;PctSeqSimilarity=0.9893;PctSizeSimilarity=0.9787;PctRecOverlap=0.9788;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=98;MatchId=3734.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:29:1/1:0:10:0:14:./.:0:0:0:0:1/1:0:12:0/1:4:10:.:.:.
chr3	104978428	HG4_PB_pbsv_3545	T	TTTATATATATATATATACACCCATATATATATATATATATATATTATATATACACACCATATATATATA	20	PASS	ClusterIDs=HG2_Ill_manta_991:HG4_PB_pbsv_3545:HG2_PB_HySA_6684;NumClusterSVs=3;ExactMatchIDs=HG4_PB_pbsv_3545;NumExactMatchSVs=1;ClusterMaxShiftDist=0.137405;ClusterMaxSizeDiff=0.137405;ClusterMaxEditDist=0.274809;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=5;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=223;REFWIDENED=3:104978274-104978496;PctSeqSimilarity=0.9664;PctSizeSimilarity=0.9565;PctRecOverlap=0.8986;SizeDiff=3;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=94;MatchId=3735.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:33:./.:14:14:10:11:./.:0:0:0:0:0/1:6:26:./.:.:.:.:.:.
chr3	106034442	HG4_Ill_manta_852	T	TGTACTTATGCATAAACATGCTTAAACACATACATATACACACACAAACAAATATTTTATAGCTTTCATTTTAGAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3349:HG3_PB_pbsv_3462:HG2_PB_HySA_6692:HG2_PB_pbsv_3538:HG4_PB_pbsv_3550:HG4_Ill_svaba_4525:HG4_Ill_manta_852:HG4_Ill_GATKHC_5910:HG4_Ill_150bpfermikitraw_4708:HG3_PB_SVrefine2PBcRDovetail_1622:HG3_Ill_svaba_4531:HG3_Ill_manta_785:HG3_Ill_Spiral_3851:HG3_Ill_SVrefine2DISCOVARDovetail_2679:HG3_Ill_Krunchall_4909:HG2_PB_SVrefine2PBcRplusDovetail_7526:HG2_PB_SVrefine2PB10Xhap12_2588:HG2_PB_SVrefine2Falcon2Bionano_1631:HG2_PB_SVrefine2Falcon1plusDovetail_8135:HG2_Ill_svaba_4433:HG2_Ill_manta_993:HG2_Ill_SpiralSDKrefine_11299:HG2_Ill_SVrefine2DISCOVARplusDovetail_8727:HG2_Ill_Krunchall_4961:HG2_Ill_GATKHC_5819:HG2_Ill_GATKHCSBGrefine_2370:HG2_Ill_250bpfermikitraw_4878:HG2_Ill_150bpfermikitraw_4529:HG2_10X_SVrefine210Xhap12_2618:HG4_PB_assemblyticsfalcon_17599:HG4_Ill_Krunchall_5172:HG4_Ill_GATKHCSBGrefine_2461:HG4_Ill_250bpfermikitraw_4962:HG3_Ill_GATKHC_5897:HG3_Ill_GATKHCSBGrefine_2384:HG3_Ill_250bpfermikitraw_4773:HG2_PB_PB10Xdip_19822;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2618:HG2_Ill_150bpfermikitraw_4529:HG2_Ill_250bpfermikitraw_4878:HG2_Ill_GATKHCSBGrefine_2370:HG2_Ill_GATKHC_5819:HG2_Ill_Krunchall_4961:HG2_Ill_SVrefine2DISCOVARplusDovetail_8727:HG2_Ill_SpiralSDKrefine_11299:HG2_Ill_manta_993:HG2_Ill_svaba_4433:HG2_PB_SVrefine2Falcon1plusDovetail_8135:HG2_PB_SVrefine2Falcon2Bionano_1631:HG2_PB_SVrefine2PB10Xhap12_2588:HG2_PB_SVrefine2PBcRplusDovetail_7526:HG3_Ill_Krunchall_4909:HG3_Ill_SVrefine2DISCOVARDovetail_2679:HG3_Ill_Spiral_3851:HG3_Ill_manta_785:HG3_Ill_svaba_4531:HG3_PB_SVrefine2PBcRDovetail_1622:HG4_Ill_150bpfermikitraw_4708:HG4_Ill_GATKHC_5910:HG4_Ill_manta_852:HG4_Ill_svaba_4525;NumExactMatchSVs=24;ClusterMaxShiftDist=0.101911;ClusterMaxSizeDiff=0.089172;ClusterMaxEditDist=0.226415;PBcalls=11;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=75;DistBack=13197;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:106034443-106034444;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3736.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:0:9:0:12:./.:0:0:0:0:1/1:0:67:./.:.:.:.:.:.
chr3	106589779	HG2_Ill_Krunchall_4967	A	AAAGGGTATGTGCTAATGGTACTAAATAGCGAGACACTTAGGGAGGTCACAAATGAAATAAGTCACAAATGAAATAAT	20	PASS	ClusterIDs=HG2_Ill_manta_994:HG2_PB_pbsv_3541:HG4_PB_pbsv_3554:HG3_PB_HySA_5471:HG3_PB_pbsv_3465:HG4_PB_assemblyticsfalcon_17606:HG2_PB_PB10Xdip_19827:HG4_Ill_svaba_4538:HG4_Ill_scalpel_3370:HG4_Ill_Krunchall_5182:HG4_Ill_GATKHC_5922:HG4_Ill_GATKHCSBGrefine_2464:HG4_Ill_250bpfermikitraw_4975:HG4_Ill_150bpfermikitraw_4719:HG3_Ill_svaba_4543:HG3_Ill_Krunchall_4917:HG3_Ill_GATKHC_5906:HG3_Ill_GATKHCSBGrefine_2387:HG3_Ill_250bpfermikitraw_4782:HG2_PB_HySA_6700:HG2_Ill_svaba_4445:HG2_Ill_Krunchall_4967:HG2_Ill_GATKHC_5826:HG2_Ill_GATKHCSBGrefine_2373:HG2_Ill_250bpfermikitraw_4889;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4889:HG2_Ill_GATKHCSBGrefine_2373:HG2_Ill_GATKHC_5826:HG2_Ill_Krunchall_4967:HG2_Ill_svaba_4445:HG2_PB_HySA_6700:HG3_Ill_250bpfermikitraw_4782:HG3_Ill_GATKHCSBGrefine_2387:HG3_Ill_GATKHC_5906:HG3_Ill_Krunchall_4917:HG3_Ill_svaba_4543:HG4_Ill_150bpfermikitraw_4719:HG4_Ill_250bpfermikitraw_4975:HG4_Ill_GATKHCSBGrefine_2464:HG4_Ill_GATKHC_5922:HG4_Ill_Krunchall_5182:HG4_Ill_scalpel_3370:HG4_Ill_svaba_4538:HG4_PB_assemblyticsfalcon_17606;NumExactMatchSVs=19;ClusterMaxShiftDist=0.204082;ClusterMaxSizeDiff=0.176871;ClusterMaxEditDist=0.272109;PBcalls=7;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=77;DistBack=1485;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=60;REFWIDENED=3:106589780-106589839;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3738.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:37:0|1:34:5:1:23:./.:0:0:0:0:0/1:19:21:./.:.:.:.:.:.
chr3	107720209	HG4_Ill_SVrefine2DISCOVARDovetail_2692	A	AGCTGATGGGACTCTGCATTCCTGCTGCCTGCTTAGCTGCTTCAGAAGCCAGCCATCATCAGCCACGGCCTGGAGAATCACACTGCTGCCACCACCCCCTCTGCAGGAGCTGGCATTAGACTGTCGCTGCCCAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2593:HG2_PB_PB10Xdip_19830:HG2_PB_PB10Xdip_19829:HG2_PB_pbsv_3544:HG4_PB_HySA_5307:HG4_PB_pbsv_3558:HG4_PB_assemblyticsfalcon_17614:HG3_PB_pbsv_3468:HG2_PB_HySA_6708:HG3_PB_HySA_5479:HG4_PB_SVrefine2Falcon1Dovetail_2142:HG4_Ill_svaba_4545:HG4_Ill_manta_857:HG4_Ill_SVrefine2DISCOVARDovetail_2692:HG4_Ill_MetaSV_3446:HG4_Ill_GATKHCSBGrefine_2469:HG4_Ill_Cortex_2427:HG4_Ill_250bpfermikitraw_4984:HG4_Ill_150bpfermikitraw_4727:HG3_Ill_svaba_4547:HG3_Ill_Spiral_3866:HG3_Ill_SVrefine2DISCOVARDovetail_2685:HG3_Ill_MetaSV_3475:HG3_Ill_GATKHCSBGrefine_2391:HG3_Ill_Cortex_2451:HG2_PB_SVrefine2Falcon1plusDovetail_8138:HG2_Ill_svaba_4447:HG2_Ill_manta_997:HG2_Ill_SVrefine2DISCOVARplusDovetail_8730:HG2_Ill_MetaSV_3301:HG2_Ill_GATKHCSBGrefine_2376:HG2_Ill_Cortex_5732:HG2_10X_SVrefine210Xhap12_2622:HG2_PB_SVrefine2PB10Xhap12_2594:HG2_PB_SVrefine2PBcRplusDovetail_7529;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2622:HG2_Ill_Cortex_5732:HG2_Ill_GATKHCSBGrefine_2376:HG2_Ill_MetaSV_3301:HG2_Ill_SVrefine2DISCOVARplusDovetail_8730:HG2_Ill_manta_997:HG2_Ill_svaba_4447:HG2_PB_SVrefine2Falcon1plusDovetail_8138:HG3_Ill_Cortex_2451:HG3_Ill_GATKHCSBGrefine_2391:HG3_Ill_MetaSV_3475:HG3_Ill_SVrefine2DISCOVARDovetail_2685:HG3_Ill_Spiral_3866:HG3_Ill_svaba_4547:HG4_Ill_150bpfermikitraw_4727:HG4_Ill_250bpfermikitraw_4984:HG4_Ill_Cortex_2427:HG4_Ill_GATKHCSBGrefine_2469:HG4_Ill_MetaSV_3446:HG4_Ill_SVrefine2DISCOVARDovetail_2692:HG4_Ill_manta_857:HG4_Ill_svaba_4545:HG4_PB_SVrefine2Falcon1Dovetail_2142;NumExactMatchSVs=23;ClusterMaxShiftDist=0.330645;ClusterMaxSizeDiff=0.322581;ClusterMaxEditDist=0.395161;PBcalls=14;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=133;DistBack=0;DistForward=3;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=3:107720210-107720213;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:32:0|1:27:3:0:29:./.:0:0:0:0:0/1:30:11:./.:.:.:.:.:.
chr3	110271029	HG2_PB_pbsv_3551	A	AAGGCCGGGCGCAGGCGTGGCTCACGCCTGTAACCCAGCACTTGGCGAGGCCAGGCGGGCGTATCACGAGGTCAGGAGATCGAGGACCATTCCCCGGCTAAAACGGTGAAACCCCGTCTCTTACTAAAAATACCATAAAAATTAGCCGGGCTAGTGCGCGGGGCCTGGTAGTCCCAGTACTTGGGAGGCTGAGGAGGAGAATGGGTGTGAACCCGGGCAGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGCGACCAGTAGCGAGACTCCGTCTCTAAAAAAAAAAAAAAAAAAAAAACTAAAAAAAAAAAAAAAAAAAAAATAATTATTT	10	PASS	ClusterIDs=HG2_PB_HySA_6733:HG4_PB_HySA_5330:HG2_PB_pbsv_3551:HG4_PB_pbsv_3571:HG4_PB_assemblyticsfalcon_17635:HG2_PB_HySA_6734:HG4_PB_SVrefine2Falcon1Dovetail_2148:HG2_PB_SVrefine2Falcon2Bionano_1639:HG2_PB_SVrefine2PBcRplusDovetail_7532;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_3551;NumExactMatchSVs=1;ClusterMaxShiftDist=0.210361;ClusterMaxSizeDiff=0.210361;ClusterMaxEditDist=0.248038;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=345;DistBack=8;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:110271030-110271030;PctSeqSimilarity=0.9503;PctSizeSimilarity=0.971;PctRecOverlap=0.9536;SizeDiff=10;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=95;MatchId=3740.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:43:0|1:32:1:1:38:./.:0:0:0:0:0/1:32:9:0/1:9:12:.:.:.
chr3	111226362	HG3_PB_pbsv_3477	C	CAAAAAAATTAAAATCAGGCCTTGGGCAGGTGCTCACGCTGTAATCCCAGCACTTTTGGAGGCCGAAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGAGGTTGGCCTGGGCGCCTGTCAGTCCCAGCTACTGGGAGGCCTGGCAGGAGGGTAAATGGCGTTGAACCGGGAAGCGAGCTTGCAGTTGAGCCGAGATTGCGCATGCAGTCCGCAGTCCAGCCTGCGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_3477:HG2_PB_assemblyticsfalcon_18045:HG4_PB_pbsv_3575:HG2_PB_pbsv_3553:HG3_PB_HySA_5510:HG4_PB_assemblyticsfalcon_17642:HG3_PB_SVrefine2PBcRDovetail_1629:HG2_Ill_breakscan11_3353:HG2_PB_SVrefine2Falcon2Bionano_1640:HG2_PB_SVrefine2Falcon1plusDovetail_8142:HG2_10X_SVrefine210Xhap12_2635:HG4_PB_SVrefine2Falcon1Dovetail_2150:HG4_PB_HySA_5336;NumClusterSVs=13;ExactMatchIDs=HG3_PB_pbsv_3477;NumExactMatchSVs=1;ClusterMaxShiftDist=0.126939;ClusterMaxSizeDiff=0.126939;ClusterMaxEditDist=0.228336;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=356;DistBack=63243;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=3:111226363-111226375;PctSeqSimilarity=0.9344;PctSizeSimilarity=0.9916;PctRecOverlap=0.9944;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:34:./.:13:8:26:15:./.:0:0:0:0:0/1:27:9:0/1:10:17:.:.:.
chr3	111691422	HG2_Ill_250bpfermikitraw_4929	A	ATGTTTTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCAC	20	PASS	ClusterIDs=HG4_PB_pbsv_3576:HG2_PB_pbsv_3554:HG3_PB_pbsv_3478:HG4_PB_assemblyticsfalcon_17644:HG4_Ill_svaba_4583:HG4_Ill_manta_865:HG4_Ill_Krunchall_5230:HG4_Ill_GATKHCSBGrefine_2477:HG4_Ill_250bpfermikitraw_5015:HG4_Ill_150bpfermikitraw_4756:HG3_PB_assemblyticsfalcon_17937:HG3_Ill_svaba_4575:HG3_Ill_manta_795:HG3_Ill_Spiral_3892:HG3_Ill_Krunchall_4960:HG3_Ill_GATKHCSBGrefine_2397:HG3_Ill_250bpfermikitraw_4819:HG3_Ill_150bpfermikitraw_4653:HG2_PB_assemblyticsfalcon_18048:HG2_Ill_svaba_4480:HG2_Ill_SpiralSDKrefine_11330:HG2_Ill_Krunchall_5010:HG2_Ill_GATKHCSBGrefine_2386:HG2_Ill_250bpfermikitraw_4929:HG2_Ill_150bpfermikitraw_4573:HG3_PB_HySA_5515:HG2_PB_PB10Xdip_19842;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4573:HG2_Ill_250bpfermikitraw_4929:HG2_Ill_GATKHCSBGrefine_2386:HG2_Ill_Krunchall_5010:HG2_Ill_SpiralSDKrefine_11330:HG2_Ill_svaba_4480:HG2_PB_assemblyticsfalcon_18048:HG3_Ill_150bpfermikitraw_4653:HG3_Ill_250bpfermikitraw_4819:HG3_Ill_GATKHCSBGrefine_2397:HG3_Ill_Krunchall_4960:HG3_Ill_Spiral_3892:HG3_Ill_manta_795:HG3_Ill_svaba_4575:HG3_PB_assemblyticsfalcon_17937:HG4_Ill_150bpfermikitraw_4756:HG4_Ill_250bpfermikitraw_5015:HG4_Ill_GATKHCSBGrefine_2477:HG4_Ill_Krunchall_5230:HG4_Ill_manta_865:HG4_Ill_svaba_4583:HG4_PB_assemblyticsfalcon_17644;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0923077;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.244275;PBcalls=8;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=106560;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=3:111691421-111691424;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3742.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:61:./.:0:0:0:0:./.:0:0:0:0:1/1:0:59:./.:.:.:.:.:.
chr3	111924471	HG2_Ill_GATKHCSBGrefine_2387	G	GAAACATCACGCTACATGACTTCAAACTATACTACAAGGCTACAGTAACCA	20	PASS	ClusterIDs=HG3_PB_pbsv_3479:HG4_PB_assemblyticsfalcon_17647:HG2_PB_pbsv_3555:HG4_PB_pbsv_3577:HG4_Ill_GATKHCSBGrefine_2478:HG4_Ill_250bpfermikitraw_5018:HG3_PB_assemblyticsfalcon_17940:HG3_Ill_GATKHCSBGrefine_2398:HG3_Ill_250bpfermikitraw_4821:HG2_PB_assemblyticsfalcon_18051:HG2_Ill_GATKHCSBGrefine_2387:HG2_Ill_250bpfermikitraw_4931:HG2_PB_HySA_6745;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4931:HG2_Ill_GATKHCSBGrefine_2387:HG2_PB_assemblyticsfalcon_18051:HG3_Ill_250bpfermikitraw_4821:HG3_Ill_GATKHCSBGrefine_2398:HG3_PB_assemblyticsfalcon_17940:HG4_Ill_250bpfermikitraw_5018:HG4_Ill_GATKHCSBGrefine_2478:HG4_PB_assemblyticsfalcon_17647;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0943396;ClusterMaxSizeDiff=0.0754717;ClusterMaxEditDist=0.220183;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=21531;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=3:111924472-111924476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:74:./.:0:1:0:4:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr3	112453492	HG2_PB_SVrefine2PB10Xhap12_2605	T	TAAGATAATAAAGAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_19846:HG3_PB_pbsv_3480:HG4_PB_pbsv_3578:HG2_PB_pbsv_3556:HG3_PB_assemblyticsfalcon_17941:HG4_PB_assemblyticsfalcon_17648:HG2_PB_assemblyticsfalcon_18052:HG2_PB_HySA_6749:HG3_PB_SVrefine2Falcon1Dovetail_2211:HG2_10X_SVrefine210Xhap12_2638:HG4_Ill_MetaSV_3450:HG2_PB_SVrefine2PBcRplusDovetail_7536:HG2_PB_SVrefine2PB10Xhap12_2605:HG4_PB_SVrefine2Falcon1Dovetail_2152:HG2_PB_SVrefine2Falcon2Bionano_1643:HG2_PB_SVrefine2Falcon1plusDovetail_8144:HG3_PB_HySA_5519:HG2_Ill_breakscan11_3354;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2605:HG2_PB_SVrefine2PBcRplusDovetail_7536:HG4_Ill_MetaSV_3450;NumExactMatchSVs=3;ClusterMaxShiftDist=0.146819;ClusterMaxSizeDiff=0.146819;ClusterMaxEditDist=0.195041;PBcalls=15;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=303;DistBack=138762;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=3:112453493-112453505;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=0.9934;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:87:1/1:3:13:3:23:./.:0:0:0:0:1/1:0:18:1/1:2:54:.:.:.
chr3	113047152	HG3_PB_pbsv_3485	T	TTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGACGAGTCTCGCTACTGTCGCTCCATGGCCGCGACTGCGGACTGCAGTGCGCGCAATCTCGCGCTCACTGCAACTGCCCGCTTCCCGGCGTTCACCGCCATTCTCCTTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGGCGCCGGCCTAATTTTTTGATATTTTTAGTTAGGCAGACGGGTTCACCTTGTTAGCCAGTATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTTGCTGGGATTACAGGGCGTGAACTTACCGCCGCCCGGCCATTCTC	10	PASS	ClusterIDs=HG2_PB_HySA_6755:HG2_PB_pbsv_3561:HG2_PB_SVrefine2PB10Xhap12_2608:HG3_PB_pbsv_3485:HG3_PB_assemblyticsfalcon_17946:HG2_PB_assemblyticsfalcon_18057:HG2_PB_PB10Xdip_19848:HG2_PB_SVrefine2PBcRplusDovetail_7539:HG2_PB_SVrefine2Falcon1plusDovetail_8147:HG3_PB_SVrefine2Falcon1Dovetail_2215;NumClusterSVs=10;ExactMatchIDs=HG3_PB_pbsv_3485;NumExactMatchSVs=1;ClusterMaxShiftDist=0.109353;ClusterMaxSizeDiff=0.106475;ClusterMaxEditDist=0.211901;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=365;DistBack=-2;DistForward=1012;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:113047153-113047153;PctSeqSimilarity=0.9544;PctSizeSimilarity=0.9479;PctRecOverlap=0.9507;SizeDiff=19;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=95;MatchId=3746.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:50:0|1:22:0:1:36:./.:0:0:0:0:0/1:24:7:0/1:8:6:.:.:.
chr3	113630543	HG2_Ill_250bpfermikitraw_4941	T	TTTCCTTCCTTCCTTCCTTCTTTCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	20	PASS	ClusterIDs=HG3_Ill_Spiral_3898:HG3_Ill_GATKHC_5957:HG4_Ill_GATKHC_5990:HG2_Ill_GATKHC_5880:HG4_Ill_Krunchall_5245:HG4_PB_pbsv_3583:HG4_Ill_FB_3297:HG2_PB_pbsv_3562:HG4_Ill_250bpfermikitraw_5032:HG2_Ill_Krunchall_5022:HG2_Ill_250bpfermikitraw_4941:HG2_Ill_150bpfermikitraw_4583:HG3_Ill_Krunchall_4972:HG3_Ill_250bpfermikitraw_4827:HG3_Ill_150bpfermikitraw_4662;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4583:HG2_Ill_250bpfermikitraw_4941:HG2_Ill_Krunchall_5022:HG4_Ill_250bpfermikitraw_5032:HG4_Ill_FB_3297:HG4_Ill_Krunchall_5245;NumExactMatchSVs=6;ClusterMaxShiftDist=0.217822;ClusterMaxSizeDiff=0.217822;ClusterMaxEditDist=0.277228;PBcalls=2;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=19;REFWIDENED=3:113630542-113630563;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3747.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:34:./.:8:22:19:8:./.:0:0:0:0:0/1:12:23:./.:.:.:.:.:.
chr3	113852468	HG4_Ill_250bpfermikitraw_5034	A	AGAAAAGAAATAGGGAAAAATGGGTTTGGGATGAGTAGCCTCTGAGAATGGAAAACT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2643:HG2_PB_PB10Xdip_19849:HG2_PB_pbsv_3563:HG2_PB_HySA_6764:HG4_PB_pbsv_3584:HG4_PB_HySA_5350:HG3_PB_pbsv_3486:HG4_Ill_scalpel_3412:HG4_Ill_manta_868:HG4_Ill_Krunchall_5247:HG4_Ill_GATKHC_5992:HG4_Ill_GATKHCSBGrefine_2482:HG4_Ill_250bpfermikitraw_5034:HG4_Ill_150bpfermikitraw_4772:HG3_PB_HySA_5524:HG3_Ill_scalpel_3611:HG3_Ill_manta_797:HG3_Ill_Krunchall_4973:HG3_Ill_GATKHC_5958:HG3_Ill_GATKHCSBGrefine_2400:HG3_Ill_250bpfermikitraw_4828:HG3_Ill_150bpfermikitraw_4663:HG2_Ill_scalpel_3500:HG2_Ill_Krunchall_5024:HG2_Ill_GATKHC_5882:HG2_Ill_GATKHCSBGrefine_2389:HG2_Ill_250bpfermikitraw_4943:HG2_Ill_150bpfermikitraw_4585:HG4_PB_SVrefine2Falcon1Dovetail_2156:HG4_Ill_SVrefine2DISCOVARDovetail_2707:HG3_PB_SVrefine2PBcRDovetail_1633:HG3_PB_SVrefine2Falcon1Dovetail_2217:HG3_Ill_SVrefine2DISCOVARDovetail_2706:HG2_PB_SVrefine2PBcRplusDovetail_7540:HG2_PB_SVrefine2PB10Xhap12_2609:HG2_PB_SVrefine2Falcon2Bionano_1646:HG2_PB_SVrefine2Falcon1plusDovetail_8148:HG2_Ill_SVrefine2DISCOVARplusDovetail_8747;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4585:HG2_Ill_250bpfermikitraw_4943:HG2_Ill_GATKHCSBGrefine_2389:HG2_Ill_GATKHC_5882:HG2_Ill_Krunchall_5024:HG2_Ill_scalpel_3500:HG3_Ill_150bpfermikitraw_4663:HG3_Ill_250bpfermikitraw_4828:HG3_Ill_GATKHCSBGrefine_2400:HG3_Ill_GATKHC_5958:HG3_Ill_Krunchall_4973:HG3_Ill_manta_797:HG3_Ill_scalpel_3611:HG3_PB_HySA_5524:HG4_Ill_150bpfermikitraw_4772:HG4_Ill_250bpfermikitraw_5034:HG4_Ill_GATKHCSBGrefine_2482:HG4_Ill_GATKHC_5992:HG4_Ill_Krunchall_5247:HG4_Ill_manta_868:HG4_Ill_scalpel_3412;NumExactMatchSVs=21;ClusterMaxShiftDist=0.101695;ClusterMaxSizeDiff=0.101695;ClusterMaxEditDist=0.241379;PBcalls=14;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=56;DistBack=73104;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=3:113852463-113852528;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3748.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:51:./.:3:4:0:2:./.:0:0:0:0:1/1:1:40:./.:.:.:.:.:.
chr3	114915084	HG2_Ill_GATKHCSBGrefine_2395	T	TAAGAATTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_5530:HG3_PB_assemblyticsfalcon_17955:HG2_PB_pbsv_3567:HG3_PB_pbsv_3491:HG2_Ill_MetaSV_3310:HG2_Ill_breakscan11_3355:HG2_PB_HySA_6771:HG2_PB_SVrefine2Falcon1plusDovetail_8151:HG3_PB_SVrefine2Falcon1Dovetail_2221:HG2_PB_SVrefine2Falcon2Bionano_1651:HG2_Ill_GATKHCSBGrefine_2395:HG3_PB_SVrefine2PBcRDovetail_1637:HG4_PB_SVrefine2Falcon1Dovetail_2159;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2395:HG2_PB_SVrefine2Falcon2Bionano_1651;NumExactMatchSVs=2;ClusterMaxShiftDist=0.209302;ClusterMaxSizeDiff=0.20598;ClusterMaxEditDist=0.229236;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=3:114915085-114915094;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3749.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:49:0|1:27:1:1:29:./.:0:0:0:0:0/1:25:11:./.:4:39:.:.:.
chr3	116742618	HG2_Ill_GATKHC_5905	T	TCTCCCTTCCTTCCCCCCTCCCTCTTTCCTTGCTTCCTTCCTTTCCTGCTTTCTCCCTTCCTTCCCCCCCCCTTCCTTGCTTCCTTCCTTTCCTGCTTC	20	PASS	ClusterIDs=HG2_Ill_GATKHC_5905:HG3_PB_pbsv_3496:HG3_PB_HySA_5543:HG2_PB_HySA_6789:HG2_PB_pbsv_3572:HG3_Ill_GATKHC_5983:HG3_Ill_GATKHCSBGrefine_2411;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_5905:HG3_Ill_GATKHC_5983:HG3_Ill_GATKHCSBGrefine_2411;NumExactMatchSVs=3;ClusterMaxShiftDist=0.050505;ClusterMaxSizeDiff=0.040404;ClusterMaxEditDist=0.13;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=98;DistBack=9684;DistForward=23;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=3:116742614-116742681;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3751.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:./.:14:7:7:17:./.:0:0:0:0:0/1:23:4:./.:.:.:.:.:.
chr3	118172068	HG4_PB_SVrefine2Falcon1Dovetail_2165	T	TCATCTGATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3356:HG2_PB_pbsv_3574:HG3_PB_assemblyticsfalcon_17980:HG4_PB_pbsv_3595:HG4_PB_SVrefine2PBcRDovetail_1844:HG3_PB_pbsv_3500:HG4_PB_SVrefine2Falcon1Dovetail_2165:HG3_PB_SVrefine2Falcon1Dovetail_2226:HG2_PB_SVrefine2Falcon1plusDovetail_8155:HG4_Ill_GATKHCSBGrefine_2504:HG3_PB_SVrefine2PBcRDovetail_1640:HG3_Ill_GATKHCSBGrefine_2417:HG4_PB_HySA_5382:HG3_PB_HySA_5553:HG2_PB_HySA_6803;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8155:HG3_PB_SVrefine2Falcon1Dovetail_2226:HG4_PB_SVrefine2Falcon1Dovetail_2165:HG4_PB_SVrefine2PBcRDovetail_1844;NumExactMatchSVs=4;ClusterMaxShiftDist=0.126506;ClusterMaxSizeDiff=0.126506;ClusterMaxEditDist=0.24058;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=330;DistBack=37323;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:118172069-118172082;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3752.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:50:./.:21:8:4:29:./.:0:0:0:0:0/1:22:10:./.:4:39:.:.:.
chr3	119930817	HG2_Ill_250bpfermikitraw_4990	T	TCTCCTCCTCCTCTTTTTCCTCCTCCTCCTTCTTCTTTCTCCTCCTCCTTCTCTCCTTCTCCTCCTCTTCCTTCTTCTTCTTCTTCCTCCTCCCTCCTCCTCCCCCCTCCTCCCTC	20	PASS	ClusterIDs=HG2_PB_pbsv_3578:HG3_PB_HySA_5564:HG4_Ill_svaba_4639:HG3_Ill_svaba_4610:HG3_Ill_GATKHC_6007:HG3_Ill_GATKHCSBGrefine_2423:HG3_Ill_250bpfermikitraw_4866:HG2_Ill_svaba_4530:HG4_Ill_manta_877:HG4_Ill_GATKHC_6048:HG4_Ill_GATKHCSBGrefine_2511:HG3_Ill_Spiral_3923:HG3_Ill_MetaSV_3486:HG2_Ill_SpiralSDKrefine_11368:HG2_Ill_MetaSV_3316:HG2_Ill_GATKHC_5935:HG2_Ill_GATKHCSBGrefine_2418:HG2_Ill_250bpfermikitraw_4990:HG2_Ill_150bpfermikitraw_4628:HG4_PB_SVrefine2Falcon1Dovetail_2168:HG2_PB_PB10Xdip_19870:HG4_PB_HySA_5394:HG3_PB_HySA_5563:HG2_PB_HySA_6817:HG2_Ill_breakscan11_3357:HG3_PB_pbsv_3504:HG4_PB_pbsv_3599:HG3_PB_SVrefine2PBcRDovetail_1644:HG2_PB_SVrefine2Falcon1plusDovetail_8158:HG4_Ill_SVrefine2DISCOVARDovetail_2725:HG3_Ill_SVrefine2DISCOVARDovetail_2730:HG2_PB_SVrefine2PB10Xhap12_2620:HG2_PB_SVrefine2Falcon2Bionano_1656:HG2_Ill_SVrefine2DISCOVARplusDovetail_8771:HG2_10X_SVrefine210Xhap12_2662:HG2_PB_SVrefine2PBcRplusDovetail_7553:HG4_PB_SVrefine2PBcRDovetail_1848:HG3_PB_SVrefine2Falcon1Dovetail_2230;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4628:HG2_Ill_250bpfermikitraw_4990:HG2_Ill_GATKHCSBGrefine_2418:HG2_Ill_GATKHC_5935:HG2_Ill_MetaSV_3316:HG2_Ill_SpiralSDKrefine_11368:HG3_Ill_MetaSV_3486:HG3_Ill_Spiral_3923:HG4_Ill_GATKHCSBGrefine_2511:HG4_Ill_GATKHC_6048:HG4_Ill_manta_877;NumExactMatchSVs=11;ClusterMaxShiftDist=0.131004;ClusterMaxSizeDiff=0.131004;ClusterMaxEditDist=0.161702;PBcalls=16;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=115;DistBack=-34;DistForward=-1;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=3:119930814-119930851;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3753.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:70:./.:0:0:0:1:./.:0:0:0:0:1/1:1:25:./.:.:.:.:.:.
chr3	119941801	HG2_PB_SVrefine2PBcRplusDovetail_7554	C	CAAGGCAGGCAGTCAGGAGGGAAAATCAAGAGATTAGAGCATGCTCACACCCCTGTGAAGAGACTGAAACCCATGTCAGTTATTGTTGCCTCTGATCTAGGTAATGAGTATATCCTGCAGAAGCTGTGGCCCTTT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_19871:HG2_10X_SVrefine210Xhap12_2663:HG3_PB_HySA_5565:HG4_PB_pbsv_3600:HG4_PB_HySA_5396:HG3_PB_pbsv_3505:HG3_PB_assemblyticsfalcon_17995:HG2_PB_SVrefine2Falcon1plusDovetail_8159:HG4_PB_SVrefine2PBcRDovetail_1849:HG4_PB_SVrefine2Falcon1Dovetail_2169:HG4_Ill_SVrefine2DISCOVARDovetail_2726:HG4_Ill_MetaSV_3458:HG3_PB_SVrefine2PBcRDovetail_1645:HG3_PB_SVrefine2Falcon1Dovetail_2231:HG3_Ill_SVrefine2DISCOVARDovetail_2731:HG2_PB_SVrefine2PBcRplusDovetail_7554:HG2_PB_SVrefine2PB10Xhap12_2621:HG2_PB_SVrefine2Falcon2Bionano_1657:HG2_Ill_SVrefine2DISCOVARplusDovetail_8772:HG2_Ill_250bpfermikitraw_4991:HG2_PB_HySA_6819;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4991:HG2_Ill_SVrefine2DISCOVARplusDovetail_8772:HG2_PB_SVrefine2Falcon2Bionano_1657:HG2_PB_SVrefine2PB10Xhap12_2621:HG2_PB_SVrefine2PBcRplusDovetail_7554:HG3_Ill_SVrefine2DISCOVARDovetail_2731:HG3_PB_SVrefine2Falcon1Dovetail_2231:HG3_PB_SVrefine2PBcRDovetail_1645:HG4_Ill_MetaSV_3458:HG4_Ill_SVrefine2DISCOVARDovetail_2726:HG4_PB_SVrefine2Falcon1Dovetail_2169:HG4_PB_SVrefine2PBcRDovetail_1849;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0925267;ClusterMaxSizeDiff=0.0925267;ClusterMaxEditDist=0.262411;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=134;DistBack=-132;DistForward=134;DistMin=-132;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=134;REFWIDENED=3:119941802-119941935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3754.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:79:./.:0:0:0:0:./.:0:0:0:0:1/1:1:35:./.:.:.:.:.:.
chr3	122466585	HG2_Ill_GATKHCSBGrefine_2426	G	GCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCACCCCGTCCGGGAGGTGAGGGGCGTCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCA	20	PASS	ClusterIDs=HG3_PB_pbsv_3512:HG3_PB_assemblyticsfalcon_18011:HG3_PB_SVrefine2Falcon1Dovetail_2236:HG2_PB_pbsv_3585:HG3_Ill_GATKHCSBGrefine_2430:HG2_Ill_GATKHCSBGrefine_2426;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2426:HG3_Ill_GATKHCSBGrefine_2430;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0457143;ClusterMaxEditDist=0.207283;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=176;DistBack=355;DistForward=32359;DistMin=355;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=336;REFWIDENED=3:122466390-122466725;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:33:0|1:29:3:0:28:./.:0:0:0:0:0/1:25:5:./.:.:.:.:.:.
chr3	122652872	HG3_Ill_MetaSV_3488	G	GGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACCACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCCTGCCCAGCCAATTTTTTTTTAAATTATTTCTCTCATTGTTTCTGTTTCTGACAGTATTTCTCATTTCATTTTCTTGTTTTGGCCTTCTCTTTCACTTTAGAGGTTTTCCTCAAATGTCTAGTGATTTCTGTCTATTTGTTCAAACCTAAAAATAAATTACTAACCTCTTCCCCCTGAAAAGAACCAGGGCTTCTTGGAGAAATGGCTGATTCCAGATCTGGGGCAGCAAATGCACAAGATAAGCTGGAACTTTCTGTCACATCAGACAGCAAGGACGTAATCAAAGACGACTGGGGTGGGTCTAAAGGACCTGGGAGCCAACATGAAGAGGTCCCCGCTGGTGAAAGATGGGGTAGTCATGAAAGATAACTGCAGTGGATTGAAAGACATCAACAATGTTTATATCCACAAGTCTGTGGTGAACATAATAATGAAAGACAAATTAATTGATCACCATTGAAAGATACTAGCAAACCAGCTCATTATTTGAAAACTGGTAAATAAAGATGGAATATCAAATATTTATCCTGCCTTTCCTATATGACTACATCATTGGGTCATCATGTAGTAGATGAGGAAAAGGTGTTTTTTCTTTTTTTCTTTTGTTTTTTGAGACGGAGTTTCACTCTTGTCGCCCAGGCTGGAGTGGCAATGGTATGATTTCAGCTCGCTGAAACCTCCGCCTCCCAGTGATTCTCCTGCCTCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2629:HG4_PB_pbsv_3611:HG2_PB_pbsv_3587:HG4_Ill_GATKHCSBGrefine_2521:HG3_Ill_MetaSV_3488:HG3_Ill_GATKHCSBGrefine_2431:HG2_Ill_GATKHCSBGrefine_2427:HG4_PB_HySA_5408:HG2_PB_PB10Xdip_19882:HG3_PB_pbsv_3513:HG3_Ill_Spiral_3945:HG2_Ill_Spiral_251:HG4_PB_SVrefine2Falcon1Dovetail_2172:HG3_PB_SVrefine2Falcon1Dovetail_2237:HG4_Ill_SVrefine2DISCOVARDovetail_2743:HG3_Ill_SVrefine2DISCOVARDovetail_2740:HG2_10X_SVrefine210Xhap12_2668:HG3_PB_SVrefine2PBcRDovetail_1651:HG2_PB_SVrefine2Falcon1plusDovetail_8161;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2427:HG3_Ill_GATKHCSBGrefine_2431:HG3_Ill_MetaSV_3488:HG4_Ill_GATKHCSBGrefine_2521;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0791408;ClusterMaxSizeDiff=0.0780102;ClusterMaxEditDist=0.173817;PBcalls=10;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=880;DistBack=-181;DistForward=20838;DistMin=-181;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=138;REFWIDENED=3:122652761-122652898;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3758.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:44:./.:5:19:22:13:./.:0:0:0:0:0/1:38:23:0/1:31:61:.:.:.
chr3	123114884	HG3_PB_pbsv_3516	G	GTGGGAGGGAGGGACGAGAGGGAGGGATGGAGAGAGAGAGGGATGGGAGAGAGGGAGGGAGGAGAGAGGGAGGGAGGAGAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1663:HG4_PB_assemblyticsfalcon_17721:HG2_PB_HySA_6846:HG2_PB_PB10Xdip_19883:HG3_PB_pbsv_3516:HG4_PB_pbsv_3613;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_3516;NumExactMatchSVs=1;ClusterMaxShiftDist=0.122699;ClusterMaxSizeDiff=0.0613497;ClusterMaxEditDist=0.243902;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=81;DistBack=7;DistForward=12;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:123114883-123114885;PctSeqSimilarity=0.9418;PctSizeSimilarity=0.9877;PctRecOverlap=0.8395;SizeDiff=1;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=92;MatchId=3759.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:43:1/1:5:23:1:15:./.:0:0:0:0:0/1:7:3:./.:.:.:.:.:.
chr3	123126612	HG4_Ill_GATKHCSBGrefine_2522	C	CAAAAAAAAAAAAGTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_5414:HG2_PB_pbsv_3589:HG4_PB_assemblyticsfalcon_17722:HG2_PB_SVrefine2PBcRplusDovetail_7566:HG4_PB_SVrefine2PBcRDovetail_1854:HG4_Ill_MetaSV_3462:HG4_Ill_GATKHCSBGrefine_2522:HG2_Ill_GATKHCSBGrefine_2428:HG2_PB_SVrefine2Falcon1plusDovetail_8162:HG4_PB_SVrefine2Falcon1Dovetail_2173:HG4_PB_pbsv_3614:HG2_PB_HySA_6847;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2428:HG4_Ill_GATKHCSBGrefine_2522:HG4_Ill_MetaSV_3462:HG4_PB_SVrefine2PBcRDovetail_1854;NumExactMatchSVs=4;ClusterMaxShiftDist=0.151369;ClusterMaxSizeDiff=0.151369;ClusterMaxEditDist=0.179153;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=311;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=3:123126613-123126629;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3760.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:49:0|1:29:2:1:37:./.:0:0:0:0:0/1:21:4:0/1:8:30:.:.:.
chr3	123209265	HG2_Ill_MetaSV_3320	G	GAAAAAGCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3358:HG3_PB_pbsv_3518:HG4_PB_pbsv_3617:HG4_PB_assemblyticsfalcon_17724:HG3_PB_assemblyticsfalcon_18018:HG2_PB_HySA_6850:HG2_PB_pbsv_3591:HG4_PB_SVrefine2Falcon1Dovetail_2175:HG2_PB_SVrefine2PB10Xhap12_2632:HG2_PB_SVrefine2Falcon2Bionano_1665:HG4_Ill_MetaSV_3464:HG4_Ill_GATKHCSBGrefine_2523:HG3_PB_SVrefine2PBcRDovetail_1654:HG3_Ill_MetaSV_3490:HG3_Ill_GATKHCSBGrefine_2432:HG2_PB_SVrefine2PBcRplusDovetail_7568:HG2_PB_SVrefine2Falcon1plusDovetail_8164:HG2_Ill_MetaSV_3320:HG2_Ill_GATKHCSBGrefine_2429:HG2_10X_SVrefine210Xhap12_2672:HG3_PB_SVrefine2Falcon1Dovetail_2239:HG3_PB_HySA_5588:HG2_PB_PB10Xdip_19887;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2672:HG2_Ill_GATKHCSBGrefine_2429:HG2_Ill_MetaSV_3320:HG2_PB_SVrefine2Falcon1plusDovetail_8164:HG2_PB_SVrefine2PBcRplusDovetail_7568:HG3_Ill_GATKHCSBGrefine_2432:HG3_Ill_MetaSV_3490:HG3_PB_SVrefine2PBcRDovetail_1654:HG4_Ill_GATKHCSBGrefine_2523:HG4_Ill_MetaSV_3464;NumExactMatchSVs=10;ClusterMaxShiftDist=0.116883;ClusterMaxSizeDiff=0.116883;ClusterMaxEditDist=0.243021;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=303;DistBack=11480;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=3:123209266-123209274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3761.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:85:1/1:0:8:0:25:./.:0:0:0:0:1/1:0:31:1/1:2:59:.:.:.
chr3	123272981	HG2_Ill_MetaSV_3322	A	AAAGAATAATATATATTATTCTTCTGCCCTATGCCAACCTTTGTTTTAGTCTTAAGACCACATTTAAATATATTAAATGTTCACTGTCTGTAAATATATTTAAATGTGGTCTTAAGACTAAAACAAAGGTTGGGATAGGGAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3359:HG2_PB_HySA_6852:HG2_PB_pbsv_3593:HG2_PB_PB10Xdip_19888:HG4_PB_pbsv_3619:HG4_PB_SVrefine2PBcRDovetail_1857:HG3_PB_pbsv_3520:HG4_PB_SVrefine2Falcon1Dovetail_2177:HG4_PB_assemblyticsfalcon_17726:HG3_PB_assemblyticsfalcon_18020:HG4_Ill_manta_879:HG4_Ill_SVrefine2DISCOVARDovetail_2746:HG4_Ill_MetaSV_3467:HG4_Ill_GATKHCSBGrefine_2525:HG3_PB_SVrefine2PBcRDovetail_1656:HG3_PB_SVrefine2Falcon1Dovetail_2241:HG3_Ill_manta_809:HG3_Ill_Spiral_3949:HG3_Ill_SVrefine2DISCOVARDovetail_2745:HG3_Ill_MetaSV_3492:HG3_Ill_GATKHCSBGrefine_2434:HG2_PB_SVrefine2PBcRplusDovetail_7570:HG2_PB_SVrefine2PB10Xhap12_2634:HG2_PB_SVrefine2Falcon2Bionano_1667:HG2_Ill_manta_1020:HG2_Ill_SpiralSDKrefine_11387:HG2_Ill_SVrefine2DISCOVARplusDovetail_8786:HG2_Ill_MetaSV_3322:HG2_Ill_GATKHCSBGrefine_2431:HG2_Ill_250bpfermikitraw_5016:HG2_Ill_150bpfermikitraw_4650:HG2_10X_SVrefine210Xhap12_2674;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2674:HG2_Ill_150bpfermikitraw_4650:HG2_Ill_250bpfermikitraw_5016:HG2_Ill_GATKHCSBGrefine_2431:HG2_Ill_MetaSV_3322:HG2_Ill_SVrefine2DISCOVARplusDovetail_8786:HG2_Ill_SpiralSDKrefine_11387:HG2_Ill_manta_1020:HG2_PB_SVrefine2Falcon2Bionano_1667:HG2_PB_SVrefine2PB10Xhap12_2634:HG2_PB_SVrefine2PBcRplusDovetail_7570:HG3_Ill_GATKHCSBGrefine_2434:HG3_Ill_MetaSV_3492:HG3_Ill_SVrefine2DISCOVARDovetail_2745:HG3_Ill_Spiral_3949:HG3_Ill_manta_809:HG3_PB_SVrefine2Falcon1Dovetail_2241:HG3_PB_SVrefine2PBcRDovetail_1656:HG4_Ill_GATKHCSBGrefine_2525:HG4_Ill_MetaSV_3467:HG4_Ill_SVrefine2DISCOVARDovetail_2746:HG4_Ill_manta_879:HG4_PB_SVrefine2Falcon1Dovetail_2177:HG4_PB_SVrefine2PBcRDovetail_1857;NumExactMatchSVs=24;ClusterMaxShiftDist=0.223022;ClusterMaxSizeDiff=0.223022;ClusterMaxEditDist=0.33213;PBcalls=14;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=142;DistBack=5748;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:123272982-123272995;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3762.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:0:8:0:6:./.:0:0:0:0:1/1:1:25:./.:.:.:.:.:.
chr3	123590712	HG2_PB_HySA_6857	T	TGAATATAGACACAAAGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCGCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACTCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACGGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGAACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGTGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGGAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAAATAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCGGACCTAATAAGACATCTACAGAACTCTCCCCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTTATAGCACTAAATGCTACAAGAGAAAGCAGGAAAGATCCAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAAGAGAGACACAAAAACCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAATGATAAAGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGAAAAGAGGAAGTCAAATTGTCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGAACAAACAGAGAGCCAAATCATGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATTGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGGAGATATAGATCAAAGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGAAAGGATTCCCTATTTATAAATGGTGCTGGGAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATATCAAAAATCAATTCAAGATGGATTAAAGATTTAAACTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGCACTATTCACAATAGCAAAGACTTGGAAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGTCGGGGGAGGGGGGGATAGCATTTGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATATAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_6857:HG2_PB_PB10Xdip_19889:HG2_PB_SVrefine2PB10Xhap12_2635:HG2_PB_SVrefine2PBcRplusDovetail_7572:HG2_PB_SVrefine2Falcon2Bionano_1668;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_6857;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00231635;ClusterMaxSizeDiff=0.00231635;ClusterMaxEditDist=0.00993131;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6036;DistBack=4976;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:123590713-123590727;PctSeqSimilarity=0.9958;PctSizeSimilarity=0.9972;PctRecOverlap=0.9974;SizeDiff=-17;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3763.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:45:./.:14:4:12:6:./.:0:0:0:0:0/1:34:10:0/1:251:642:.:6007:.
chr3	124641547	HG3_Ill_Spiral_3959	G	GCTCAAGGGATCCTCCTGCCTCAGCCTCCTGAGTAGTTGAGACTACAGGTATATGCCACCACAGCCAAGCAATTTTTTAACTTTTGTAGAAATGGGGGTCTCAGTATGTTGGCTAGGCTAGTCTCAAATTCCTGGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2182:HG2_PB_pbsv_3599:HG3_PB_pbsv_3526:HG4_Ill_manta_880:HG4_PB_pbsv_3627:HG4_Ill_MetaSV_3469:HG4_Ill_GATKHCSBGrefine_2526:HG3_Ill_manta_811:HG3_Ill_Spiral_3959:HG3_Ill_MetaSV_3495:HG3_Ill_GATKHCSBGrefine_2435:HG3_Ill_250bpfermikitraw_4903:HG3_Ill_150bpfermikitraw_4732:HG2_Ill_manta_1021:HG2_Ill_SpiralSDKrefine_11391:HG2_Ill_MetaSV_3323:HG2_Ill_GATKHCSBGrefine_2433:HG2_PB_HySA_6864:HG2_PB_PB10Xdip_19897:HG3_PB_HySA_5598:HG3_PB_SVrefine2Falcon1Dovetail_2246:HG4_PB_SVrefine2PBcRDovetail_1861:HG4_Ill_SVrefine2DISCOVARDovetail_2754:HG3_PB_SVrefine2PBcRDovetail_1659:HG3_Ill_SVrefine2DISCOVARDovetail_2749:HG2_PB_SVrefine2PBcRplusDovetail_7579:HG2_PB_SVrefine2PB10Xhap12_2641:HG2_PB_SVrefine2Falcon2Bionano_1672:HG2_PB_SVrefine2Falcon1plusDovetail_8170:HG2_Ill_SVrefine2DISCOVARplusDovetail_8789:HG2_10X_SVrefine210Xhap12_2679;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2433:HG2_Ill_MetaSV_3323:HG2_Ill_SpiralSDKrefine_11391:HG2_Ill_manta_1021:HG3_Ill_150bpfermikitraw_4732:HG3_Ill_250bpfermikitraw_4903:HG3_Ill_GATKHCSBGrefine_2435:HG3_Ill_MetaSV_3495:HG3_Ill_Spiral_3959:HG3_Ill_manta_811:HG4_Ill_GATKHCSBGrefine_2526:HG4_Ill_MetaSV_3469:HG4_Ill_manta_880;NumExactMatchSVs=13;ClusterMaxShiftDist=0.105634;ClusterMaxSizeDiff=0.0985916;ClusterMaxEditDist=0.256055;PBcalls=14;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=135;DistBack=-28;DistForward=24292;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=3:124641541-124641575;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3765.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:19:0:26:./.:0:0:0:0:1/1:1:24:./.:.:.:.:.:.
chr3	124753036	HG3_Ill_GATKHCSBGrefine_2436	T	TTGATAACATTCTAAGGAATAAGAAACCACAGTCAAAAATCACAAAATACA	20	PASS	ClusterIDs=HG2_Ill_Cortex_5766:HG3_PB_pbsv_3527:HG3_PB_HySA_5601:HG2_PB_HySA_6868:HG4_PB_assemblyticsfalcon_17740:HG4_Ill_svaba_4666:HG4_Ill_scalpel_3473:HG4_Ill_Krunchall_5340:HG4_Ill_GATKHC_6086:HG4_Ill_GATKHCSBGrefine_2527:HG4_Ill_250bpfermikitraw_5105:HG4_Ill_150bpfermikitraw_4846:HG3_Ill_svaba_4646:HG3_Ill_Spiral_3961:HG3_Ill_Krunchall_5057:HG3_Ill_GATKHC_6047:HG3_Ill_GATKHCSBGrefine_2436:HG3_Ill_250bpfermikitraw_4905:HG3_Ill_150bpfermikitraw_4734:HG2_Ill_svaba_4563:HG2_Ill_SpiralSDKrefine_11393:HG2_Ill_Krunchall_5118:HG2_Ill_GATKHC_5972:HG2_Ill_GATKHCSBGrefine_2434:HG2_Ill_250bpfermikitraw_5022:HG2_Ill_150bpfermikitraw_4657:HG4_PB_HySA_5428:HG4_PB_pbsv_3629:HG4_Ill_Cortex_2441:HG3_Ill_Cortex_2461;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4657:HG2_Ill_250bpfermikitraw_5022:HG2_Ill_GATKHCSBGrefine_2434:HG2_Ill_GATKHC_5972:HG2_Ill_Krunchall_5118:HG2_Ill_SpiralSDKrefine_11393:HG2_Ill_svaba_4563:HG3_Ill_150bpfermikitraw_4734:HG3_Ill_250bpfermikitraw_4905:HG3_Ill_GATKHCSBGrefine_2436:HG3_Ill_GATKHC_6047:HG3_Ill_Krunchall_5057:HG3_Ill_Spiral_3961:HG3_Ill_svaba_4646:HG4_Ill_150bpfermikitraw_4846:HG4_Ill_250bpfermikitraw_5105:HG4_Ill_GATKHCSBGrefine_2527:HG4_Ill_GATKHC_6086:HG4_Ill_Krunchall_5340:HG4_Ill_scalpel_3473:HG4_Ill_svaba_4666:HG4_PB_assemblyticsfalcon_17740;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0761905;ClusterMaxSizeDiff=0.0754717;ClusterMaxEditDist=0.238532;PBcalls=6;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=1;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:124753037-124753039;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3767.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:23:0|1:33:1:0:18:./.:0:0:0:0:0/1:30:34:./.:.:.:.:.:.
chr3	124808629	HG2_Ill_SVrefine2DISCOVARplusDovetail_8791	C	CTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCCAACATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTGGTCAGGCTGGTCTTGAACTCCTGACCTCGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCTCACCCGGCAAACTTTTTTTTTTTTTTTTTTTTTAGTTTGCCTAAATAGTTATGGGCTATTTGATTTAGTTAGTAGTTGTAACAAGTTGCTTTATTTTAAATTGGAGCATCATAGGATTTTGCTGAAAAGGGCTCTCTAATGTATTTTTAAACAGCTTTATTATTAAGGAATAATTGATATGCAATAAACTGTGTATTGACTGTATTTTCTTGTTTTCTATATTCTGGATGCCCTGGCATTTTGGATCTTGATCCTGGAGGGTCTAGCTAATTCCTAGATACTGAATAGCAAACAATTCTCCAGTGGGTGGGCTTTTGATATAAAACCAACCAATCCAGGTTCTTCCCCTTAATGTAGTTCTTTATCAAACTCTCCCACACCAAGCCAATATTACCCCTGCCCTAAATCACACGAGGACGAGACAACTATAGTTCATCCCTGTAGCCCAGAGTCTGCTAAAATTACTCGAATTATTCAATCCTAGCCTTACGCAGTGTACCTACCCTGCCTTGCTCATTCCTTTCCACAAAAACCCAGAAGAGGCTCTAGGCCATGATCTCCCCTCTTCCTCTTCTGCCCCATGACTAACCCTGGTCCATCCCCACATGGCCCTGCATGGCATACCAAGCCTCCTGTTTCTAACGATCTTCCTCCTTCATGACAGTCATTTCCAGGTCTGTGTGTTTTACCACACCTGACTAAAACAAATCCTGGGTACATCTGCAGAACAAACTGCATGTAAAGACAGTCCATGACTTACAATTATTCTTTACAATTGGTTTATCAGGACATAATCCCATCATTAAATCAAGGAGTGTCTGTATTTAAAGTATACAATTTGGTCTGTGTGTGTGTGTGTGTATATATGTGTATATATATATATATATATATATATATTTCACAGTGTACACATGGTTAGATGTGTGTGTGTATATATATATATATACACACAAGCAAGATAATGAACACGTCTAGCATCACAAGCAAGATAATGAACATGTCTAGCACCTCCAAAAGTTTCCTCAAGCCACTTCATAAGATCTCTCTCCCATGTATCCTTACTCCATTCCCATTCGAAAGTATCCACTGATCTGCTGTCACTATAAATTAAACCCAGCCTTAAAAGTATTTTTTGAAGGTCAGAAGTCCTTAATTTTGATAAAGTCCAATTTATAAATATTTTCATGCTTTTGTTTTATCTAAGAAATCTTTGCTAACTCACAGTCGCAAAGATTTTTCTCTTACATTTCCTTCTAGAAATTTTATAGGTTTAAGTTTCACATTTAGTTCTAATATCCATTTTGAGTTATATTTTTATATGGTATGATATATAGGTGGAAGTCTACTTTCTGCATATGGCTTTCTGGTTGTTTCAGTGCCATTTGTTGAAAGACTATTCTTTCCTCCCACTGAATTACCTTTGAATCTTTTTCAAAAATCAGTTGACCATATATGTGTGGGTCAGTTTCCAAATCCTCTACTCTGTCCATTGATTCACTTGTCTAGCTCTTCCACATCACACTGTCTTGATGACTTTAGCTTTAAAATCAGTCTTGAAATCAGAAAGTGCAAGTCTTACAACCTTGTTCTTCTTTTACAAAATTGGTTGGGCTATTAGGTCCTTTGCATTTCCATATAAATATTTTAGAATCTGATTGACAATTTCTATAAAAAGGCAGCGGAGATTTTTGACTGGGATTATGTTAAATGTATATAAAAATTGAGGGATAATTAAACTTTTAAGAATATTAAGTCTTCCAATTCATGAACATAGTATATCTCTTCATTTATTTCTTTAATTTACTCTTTAATTTTTTTTCAGGAATGCTTTGTAGTTTTCCTTTTCTCATCTGTAAATATGGTGAATTACATTGATTAACTTCAAATGCTAAATGAACCTTGCATTCCTGGAAGAAACCCACTTGATCATGGTGTATTATTCTTTTCACATATTATTGCATTCAATTTGTTAAAATTTTGTTAAGAATTTTTGCATCTATATTCATGAGATATGTTAGTCTATAGTTTTCCAAAGAGTTTGTATAGAATTAGTATTTTTTCTTCTTTAAATGTTTGGTTGAATTTATTAGTAAAGCTGTCTGGGCATAGGCTTTTCTCTCTGGTAAGGTTTTTAATGACCAGTTTAATTTCTTTAATAGATGACCTGAATAGCCCCATATCTATTTCTTCTTGAGTGAGCTTTGAAAGTTTGTATCTTTCAAGGAATTTGTCCAATTCATCTAAGCTGTCAATTTATCAAGAGAAAGTTGTTTATATTATTTCTTTATTTCACTTTTAATATCTATAGGATTTCTAATGATGTCATCTCACTCATTCCTGGTATTGGTAATTTGTGCTTCTTCTTTTATTCTGATCAGTCTGGCTAGAGGTTTATCAATTTTACTGATCTTCTCACATAATCAGTTTTTTGCTTCATTTGCATTCTCTATTTTTTTCTGTTTTACATTTTATTAATTTCTACTCTGATCTATTCTGATTTATTATTTCCTTTTTTCT	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_17741:HG4_PB_pbsv_3630:HG4_PB_SVrefine2Falcon1Dovetail_2183:HG2_PB_pbsv_3601:HG3_PB_pbsv_3528:HG3_PB_SVrefine2PBcRDovetail_1660:HG2_10X_SVrefine210Xhap12_2681:HG4_PB_SVrefine2PBcRDovetail_1862:HG2_PB_SVrefine2Falcon1plusDovetail_8171:HG2_PB_SVrefine2PBcRplusDovetail_7581:HG2_Ill_SVrefine2DISCOVARplusDovetail_8791:HG2_PB_SVrefine2PB10Xhap12_2642:HG2_PB_PB10Xdip_19898;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8791:HG2_PB_SVrefine2PBcRplusDovetail_7581;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0851978;ClusterMaxSizeDiff=0.069089;ClusterMaxEditDist=0.222613;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=2709;DistBack=55590;DistForward=7742;DistMin=7742;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:124808630-124808631;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9996;PctRecOverlap=0.9993;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3768.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:50:0|1:28:5:4:27:./.:0:0:0:0:0/1:28:11:0/1:128:205:.:2707:.
chr3	125778106	HG2_Ill_Krunchall_5132	G	GAAAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA	20	PASS	ClusterIDs=HG4_PB_pbsv_3638:HG3_PB_HySA_5617:HG4_PB_HySA_5435:HG2_PB_PB10Xdip_19900:HG2_Ill_Krunchall_5132:HG2_PB_assemblyticsPBcR_17561:HG3_PB_pbsv_3535:HG2_PB_HySA_6879;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_Krunchall_5132;NumExactMatchSVs=1;ClusterMaxShiftDist=0.155844;ClusterMaxSizeDiff=0.155844;ClusterMaxEditDist=0.217949;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=78;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=96;REFWIDENED=3:125778062-125778157;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:0:17:1:18:./.:0:0:0:0:./.:3:44:./.:.:.:.:.:.
chr3	125979265	HG2_PB_HySA_6881	A	ACCTAACCTTAACCAAACCCTCCTTGTCCTCCTCTCCCTCCTCCTAACCCTAATCCAAGCCTAACCTTAACCCAAACCCTCCTTGTCCTCCTCTCCCTCCTCCTAACCCTAATCCAAGC	20	PASS	ClusterIDs=HG2_PB_HySA_6881:HG3_PB_HySA_5619:HG3_PB_pbsv_3536:HG3_PB_SVrefine2PBcRDovetail_1663:HG2_PB_SVrefine2Falcon1plusDovetail_8175:HG4_PB_pbsv_3639:HG2_Ill_250bpfermikitraw_5034;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_6881;NumExactMatchSVs=1;ClusterMaxShiftDist=0.112554;ClusterMaxSizeDiff=0.112554;ClusterMaxEditDist=0.27234;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=118;DistBack=14258;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=144;REFWIDENED=3:125979224-125979367;PctSeqSimilarity=0.9916;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:21:./.:9:12:20:8:./.:0:0:0:0:./.:5:2:./.:.:.:.:.:.
chr3	126090187	HG2_PB_HySA_6885	G	GAAGAAGGAGCTGTCTTCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCTACTGGGAAGTGAGGAGCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGTCAGCCCCCACCCGGCCAGCCGCCCCGTCCGGTAGGGAGGTAGGGGGTCAGCCCCCCGCCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCGCCGGCCAGCTGCCCTGTCCGGGAGGGAGGTGGGGGGGTTCAGCACTCCGCCCGGCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCGGCCAGCCGCCCCATCCGGGAGGAGGTGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGAGAGGTGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCATCCCGGAGGGAGGTGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCCGTCCGGGAGGTGAGGGGCGGCCTCTGCCCGGCCGCCCCTACTGGAAGTGAGGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGTGTCGGCCCCCCGCCCGGCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTGTCGGCCCCCTGCCCGGCCAGCCCGCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCTACTGGAAGTGAGGAGCCCTCTCTGCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCCGCCCAGCAGCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCGCCCCTACTGGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCACATTGAGAACGGGCCAGGATGAACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAGATTGAGAATCGTATAGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCAACCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAAGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCATGACCCTGCCAAATTCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAATAAATTTAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2187:HG2_PB_pbsv_3611:HG2_PB_assemblyticsPBcR_17567:HG4_PB_pbsv_3641:HG2_PB_HySA_6885:HG3_PB_pbsv_3538:HG2_Ill_breakscan11_3361:HG2_PB_SVrefine2Falcon1plusDovetail_8176:HG2_PB_SVrefine2PBcRplusDovetail_7584:HG2_PB_SVrefine2Falcon2Bionano_1676:HG2_PB_SVrefine2PB10Xhap12_2647;NumClusterSVs=11;ExactMatchIDs=HG2_PB_HySA_6885;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0386688;ClusterMaxSizeDiff=0.0386688;ClusterMaxEditDist=0.223267;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1562;DistBack=136;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:126090188-126090188;PctSeqSimilarity=0.9841;PctSizeSimilarity=0.9842;PctRecOverlap=0.9849;SizeDiff=-25;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3771.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:23:34:0|1:21:0:1:25:./.:0:0:0:0:0/1:27:3:0/1:52:100:.:1773:.
chr3	126775069	HG2_PB_SVrefine2PB10Xhap12_2653	G	GGGGCTGCAGGTGGAGCTGCCTGCCAGTCCCGTGCTGTGCCCCTGCACTCCTCAGCCCTTGGGCGGTCGCCGTGGAGCAGGGGACGGCACTTGTCAGGGAGGCTCTGGAGGCGCAGGAGCCCGTGGCGGGGGCAGGGGAGGGGTGGGGGGCCAAGGGAGGGGGGCAGGGGGTGGGGGGGATGGGGGACGGGGTGGTAAGGGGAGGGGGCAGGGGGGCGAGGGGAGGGGGGCAGGGGCAGCAAGGGGGGGCGAGGGGAGGGGGGGCAGGTATGCTGGGGGGTGGTGAGGGGAGGGGGGCGGGGGCCGGGGGGGGCAGGGGGAGGCAGGAGGCCCAGGCATGTT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_19903:HG4_PB_pbsv_3649:HG3_PB_HySA_5636:HG4_PB_HySA_5447:HG3_PB_pbsv_3547:HG4_PB_HySA_5446:HG3_PB_assemblyticsfalcon_18053:HG2_PB_assemblyticsPBcR_17577:HG2_PB_HySA_6899:HG2_PB_pbsv_3619:HG3_PB_SVrefine2Falcon1Dovetail_2256:HG3_Ill_MetaSV_3501:HG3_PB_SVrefine2PBcRDovetail_1669:HG4_PB_SVrefine2PBcRDovetail_1871:HG2_PB_SVrefine2PBcRplusDovetail_7590:HG2_PB_SVrefine2PB10Xhap12_2653:HG2_PB_SVrefine2Falcon2Bionano_1681:HG4_PB_SVrefine2Falcon1Dovetail_2193:HG3_PB_HySA_5635:HG2_PB_SVrefine2Falcon1plusDovetail_8180;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2653:HG2_PB_SVrefine2PBcRplusDovetail_7590:HG4_PB_SVrefine2PBcRDovetail_1871;NumExactMatchSVs=3;ClusterMaxShiftDist=0.171254;ClusterMaxSizeDiff=0.171254;ClusterMaxEditDist=0.272868;PBcalls=19;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=341;DistBack=6532;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=3:126775070-126775080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3773.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:76:1/1:0:28:0:32:./.:0:0:0:0:1/1:0:20:./.:3:28:.:.:.
chr3	127015533	HG2_Ill_MetaSV_3328	A	AAAAATTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_6902:HG4_PB_pbsv_3651:HG4_PB_SVrefine2Falcon1Dovetail_2195:HG2_PB_pbsv_3621:HG2_Ill_breakscan11_3362:HG3_PB_assemblyticsfalcon_18057:HG2_PB_assemblyticsPBcR_17580:HG4_Ill_MetaSV_3474:HG3_Ill_MetaSV_3502:HG3_PB_SVrefine2Falcon1Dovetail_2258:HG4_PB_SVrefine2PBcRDovetail_1873:HG2_Ill_MetaSV_3328:HG2_PB_SVrefine2Falcon2Bionano_1683:HG2_PB_SVrefine2Falcon1plusDovetail_8182:HG2_PB_SVrefine2PBcRplusDovetail_7592:HG2_PB_HySA_6903:HG3_PB_pbsv_3549;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_3328:HG4_PB_SVrefine2PBcRDovetail_1873;NumExactMatchSVs=2;ClusterMaxShiftDist=0.285271;ClusterMaxSizeDiff=0.285271;ClusterMaxEditDist=0.368992;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=331;DistBack=-19;DistForward=-1;DistMin=-19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:127015534-127015547;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:42:0|1:24:4:3:24:./.:0:0:0:0:0/1:24:12:0/1:4:26:.:2080:.
chr3	127859142	HG2_PB_SVrefine2PB10Xhap12_2658	G	GCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTTTCCTGCCTCAGCCTCCCAAGTAGGTGGGATTACAGGCACCCACCACCATGCCTGGCTAATTTTTTTATTTTTAGTAGGGACGGGGTTTCACCATGTTTGCCAGGCTGGTCTCAAACTCCTGACATCAGGTGATCTGCCACCTAGGCTTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCAGTTTCAAACGATACAAACTTCTTTATGAAAAACCCACAGCTAACATCATAATGGTAAGAGACCGGGTCCTTTCCACACTGAGACCCTTCTCTCTATACAGAGAGTGCTATTTCTCTTTCTTTTCTCTTCTGCCTATTAAATCTCTGCTCCTAAATTCCTTGTGTGTGTCCATGTCCTAAATTTTCCTGGCATGAGATAACGAATCCCAGGGTACATACCCTAGACAATGTAGCCGCTTCATATTGGGGACCTTGTCTGGGATACCAAGGTACAACATTCATCGAAACAGTGAGTAGAGGAGCAGACTCCAACTCTGTCCTTTCATTTCAAGGCTCTCAGCCTCCATTTTAGAACTAAATCAAACCAAATACTGGGCCCCCTTCAGCCATTTAAAAACGATTAGCATGGCTGCCAGCGTTACAAGACTTGGGGGACAGGCTTGCTGGGGAGAACATGGAGAATCCCCCAGTACCCATGGGTTGCTGGGCATATTGGCTATGTTTGAATCAGCTTCATTTCATGGAGGACTTAGCCGTGGCATGGGGCTGGAGGAGGTTTTGGAGCAACTGAGGATTTCTGGCTGGGCTACTCCACAGTGTTATCCAAAGGCTTTTGGACTGACCCCAGCCTCTGACCACCATGGAGTGTCGGCAACAGGATCTCCAACTTTCCTATGGTAATTTCCCCTTTCCTGTCCGCGACCGCCATATCTCTTATCCTCTTTGGGTATGACAGTGCCCCGTATAAATCAGACACACCTCCTCAAACCTGACTATAAAATCCTGTGCATCCACCACCCACTGGTTCTTTCCACTTGGAGACCCCTCTCTGCAAAGAGAGTTGTTTCTTATTTATTTATTTTTTTTTTTTGAGACATGAGCCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCCATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGCGCCCGCCACCACACCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTTCTGACCTTGTGATCTGCCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCTGTTTCTCTTTTTCTTCTCTTCTGCCTAGTAAACCTCTGCTCAAAACAAACAAACAAAAAAACTAAAATTTCCCCCTATCGAGAACAAGCAAGGATGTCCACTTTTACCACTTCTACTCAATATACTACTGGAAGTTCTACACAGAGCAATTAGGCAAAATGAATTAAAGGGCATCCAAATTGGAAAGGAAGAGGTAAAACTACTTCTGTCTTAAATGACAATCCTGTATGTAGAAAACCCTGAAGAATCCATCCAAAAAACACTGTTAGAGGCCAAGAGCAGTGATTCACATCTGCAATCTCAGAGCTTTAGGAGGCCAAGGCAGGAGAATCACCTGAGCCCAGGAGTTCAAGGCTGAAGTGAGCTATGATTTTGCCACTGCACTCCAGCCTAGGCAAGAGGGTGATACTCTGTCTCTAAAACAAACAAACAAACAAACAAACAATAACAACAAAAAAAACCCTTTTAGAACTAATAAACAAACTGAGCAAAGTTGCAGGATGAAAAATTGACAAATCAATCGTATTTCTATGCACTAGCAAAAAACACTAAAAAAAGAAATTTAAAAAATTCCATTTACAACAGTATCAAAAAGAAAAAAATACTTAGTAAATTTAACTAAGGAGGTGCAAGACTTGTACATCAAAGGAGGTGGAAGCAAATAACTGTTGAAGGAATTTACAGAAAGCTTAAATAAATAGACATTCTGGATTCACGGATTAGAAGACTTAATATTGTTAAGATGACAATACTATCCAAAGTAGTCTGCAGAATCAACACATTCCTATCAGAATCCAAACGGTATGCTTTTGCAAAAACAGAAAAACTCATCCTAAAATTCATATGAAATTTCAAGGAACCCCAAATAGCCAAAATAATCCTGAAAAAGAACAAAGGTGGGGTATTCATAATTTGTGATTTCAAAACTTAATATAAGCAATATTAATCAAAACAGTGTGGAACTGGCATAAAGATGGACATGTAGACCAGTGAATAGAATTGAGAGTCCAGAAACAAACCCTCACATATATGACCAACAGATTTCTGACAAGGGTGTCAGGACCATTCAATGAGGAAAGCAGAGTCTCTTCAACAAATGCTGGCAGAAAAATTGGATATCTGGATGCAAAGGAATGAAGTTGGAGCCTTATGTTACACAATGTATAAAAGTTAACTGAGAATGGATTTTTTAAAGCCCTAAATTTAAGAGCTTAAAATACAAAACTCTTAGATGACAACAAAGGAGCAAATCTTCGTGAACTTGTGTCATGGCAATGGTTTCTTAACTATGGCACCAAAGGCACATATAACGAAAGAAAAACTAAATATGTTGGACTTCATCAAATGTAAAATTTTGTGTATCAAAGGACACCGTCAAAAGAGTAAAAAGACAACTCACAGAATGGGAGAAAATATTTGCAAATCATATATCCCATGAGGGTTTAATATTTAGAATATATAAAGAACTCCCACAATTCAAAACAAAAACAAACAAACAATCCAATTAAAAAATGGATAAAGGATGTGATAGACAATTTCCCAGAGAAGACACACAAATGGCTAGTAAACATATGTAACGATGTTTAACATCATTAGTTATCAGGGAAATGGAAATACTAACCACGGTCAGATACTATTTCATACCCCCCAAGATGGCTATAATTTAAAAATGGAAAATAACAAGTGTTGGTAAGAATATGGGGAAATTGGAACCCTTGTGCAGTGCTGGTGGGAATGTAAAATGGTGCAGCTGCTGTGGAAAATTTATTGATTCCTCAAAAAGTTAATCATAGACTTACCATATGACCCAACAATTCCTCTCCTATTTCAATATTTAAAAGAATTGAAAACAGGGACTCAAACAGATTCTTCTGTACCCATGTTCATATCAGCAATATTCACAATTGCCAAAGGGTGGAAACAACCCACATGTTCATCAATGGGTGAATGACAAACAAAATGTGGCCTACACATGCAGTGGAATATTATTCATCCATAAAAAGGATGACATTCTTAGGCCTGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGCGAGTGGATCACGAAGTCAGGAGTTCGAGACCAGCCTTGCCAGCATGGTGAAACCCCGTCTCTACTAAAAATACTGTGAACAACAATATGTCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGGGGCAGAGGTTGCAGTGAGCTGAGATCGCGTCACTGCACTCCAGCCTGGCCGACAAAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGATGAGGTTCTTTTGGCACATGTTACAATACAGATGAACATTGAAAACATTATGATAAGTGAAATAAGCCAGACACAAAAGGACATATATGTATGAACAAATATGTATGATTCTACTTATATGAAATATCTATAATAGGCATATTCATAGAGACAGAAAGTAGAATAGAGGTTAACAGGAGATGGGAGCAGTGATAAGTTATTATCAATGAGTATTTTGTTTTTGAGATAAAAAAAGTTATGAAAATAGTGATGATGGTTTCACAACATCTTGGATGTACTTAATACCATTGAATTGTACATTTAACCACAGCTTAAAAGATTTTATGTTATGTATATTTTACCAAAAAATTTTAAAAAAGAAAAAAAGGTAAAATTGACTTCTCAAGAGCCAAATCCTCCAGACATCTTCCAAGCTTATAGGATTTCTCTGCAACATTTAACACCACTGACCACCAACCCTATCTGGAAACTCTCAACTCACCTAGGGTGTCAGTTAGGAATGCTTTTGACTTCAAGCAACAAAAAACAAGACACACAGTAGCTTCAGCAATTAGGGGATTGTGTCTGATGCTCCTTCGCCCTTAGCATACAGCTTTGGTTCTCATGATTCAAGGATGGCTGCTGCACCTCCAGGCTTCACTTCCACATCCCAGGCAGGAAAAATAAGGACAGAGAAAGAGCCATTGGCTAAATGCTGAAGATCCTGGCCAGCAAAGACTGTCCTCTCTAAGGGGCTTTCTAGGAAACCCAATCAGTGATGCCCACTTACATCTCACTGTCCAGAACCGGGTCACATACTCCTCTCTAATGGCAAAGCAGGATGGGAGTGTGAAAAGGCTTTTACCTGAGCATACCTCTTCCCAAAATCTAAATAGAGCTCTGTCAGAAAGGAAGAAAGAAGAGTGGAGAATGAGGAGGCCACTGGCAAAACCTGCCCCCTGGCTTCAGGGGTGCCCCTGGCCCCTGATTCTGGCTTCTCCAGCTCTCTCACTACTGTTTCCTCTGGCTCACCCTTGACCATTCAGCATTTCCCCACATTCTGACTTCGGCTCACTTCCTTTTTCATTCCAGGTTCTTTCCCTGAGCCCATGCACCTCCCAGCCCCTGCTTTCAGCTATCACCCCTCATCAGGGAATCCCAAACACACACATAACTTCTACCTGACCCAACGCCTGAGCTATAGACACATTCGTCCATTCATTCAAAAATGTTTATGAAGTGCTTTCTATGAGCTGGACACTCCTCTAGGCCTTGAGGATACAGCAGGAAGCAACAGCCCTCACAGAGTTTACCTTCAAGTGAGGGAGAGGGTTTATTAACATGTAAGCAACTAAGTAGGTTGTTCCAACTGGTGGCACCAGAAGACTCCACAGCAGGATGCTGTGACAGAGGAGAGCGGGGATGGAAGGCTACTTCCAATAGGATAACCTCGAAGAGCTCTCCAAAGAGGTAACAAGAATAGTTGGTTTCCAGCCTGGGAAATAGGGTGATACCCGTCTCTACAGTTTTTTTTTTTTCTTAATTAGGCAGGTGTGGTGGTATGCATCTGTGGTCTCAGCTGTTCAGGAAGCTGAGGTGGGAGACTGGCTTGAGCACAGGAGGTGGAGGCTACAGCAAGCCATGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACCCTGTCTCAAAACGCAAAACAAAACAAAACAAAACAAAACAAAATAGTTGGTGCTAGCAAGGAGTGATTTTAAAATTTCCACCTGAGGGGGCTAGATACTGTAACAAGAGCAACTGACATTTTGCAGATTCGATATGGAGTCATGTGTGGAAACCTAAGTGGCACCACCTTCCCATGTGATTCTAGAACATTTTGAAACCTACAGGGCCCAGTGCCCCAGTCAATGGCTTGGCCCCCATCCCTTGATCAGGCCTCAGCATTTTTCACCCGATAATTATTATATAATCACTCCTCACTTTCTTCAGGATTCTCTCTAGGGGAGACTTGCCCGGGCCACATTTGCAATTGAAACTTCTCCCTTACCCTAACCAGCTCTTCCCCTTCCCCACAGTTGTCCCCACAGCATTCATCACCACATAGCATACACTATACATCTATTGCTTATTTGTTTATTGCCTGCCTTCCCTACCATAACTGGGTGTGTACCAAGGTAGGGATTCTTGTTTGTTCTTTTCACCGTGGAACCCCCAGGCTCCAGGCCTGTGTCGGGCACATATAAGACGCTCAGAAAATATTTGTTCAATGAGTAAATGGTCTGCTCGCTTGGAGGCTCCACCCTATCTCTCACCCTCCTCCTTCCTGGCTACCAGAGAGACCAGTCCACTAGATCATTCCCCTGCTTAGCAACTTTCAACAACACCCTGTGCTTTCAGAAGAGAGTGCAAATTCTCAACCCAGCACTGGGGATGGCCTGGCTCTCTGTCACTCCAGCCTCATCTCCCACTCCTTTGACACCCTGCACTGTAGCCTCATCACCCCATTCATAGGTCCTTGCCTATGTCTATTTTATTTTTCTCTTTCTTCCGGATCTCAGGTGCAGAGAGTTGAGTTCATCTTCCCTTCGGTTTCATGAGTCACTATCATTTCGGGTAAGTGGGAGGTCAGTGGTAAGCCCCCATTTTTTTTTTTTTTTTTTTTGAGAAGGAGTCTCGCTCTGTCACCCAGGCTGTAGTGCAGTGGCGTGATCTCAGCTCACCACAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAACCTCCCGAGTAGCTGGGATTATGGGCACGCACCACCACACCTGGCTAATGTTTTTGTATTTTTAGTAGAGATGGGGTTTTACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGAGATCTGCCCGCCTCGGCCTCCCAAAGTGTTGGGATTACAGGCCTGAGCCACTGTGCCCAGCCAGTAAGCTCTCTTGATTTATTTTATTTTAAATATTTCCCCTCTCCATCCCTAATCTCCACTCTGATTTCATTTCCCCATGGAGGTGCCCACTCTAATGCATTTGGTCCAGGTCCTGGCTGGCTTTCTATCCCTGGCAAATATGTGGCATTCATTTATATAAGCAAGTACATACATGCCCTTGTACTACAGATCTCATTCTGTTTGTTACCTTTTCCACCCAACACCGAGGGTGTGATGTATGTGTATGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAATCTCTCCATTTCTCATTGCTCCCCACCAGATTGGTAATCCCTGCTGTTGTCCAAGTCCCACCCTAAGCATCCACCACATCTTATTCTCCTCCCAGTGTTAGACCTTCCACTGCCTCTAACTCCCAACAATTACAACAGAGTTGCAATTAACATC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3363:HG2_PB_PB10Xdip_19913:HG2_PB_SVrefine2PBcRplusDovetail_7594:HG4_Ill_SVrefine2DISCOVARDovetail_2779:HG2_PB_SVrefine2PB10Xhap12_2658:HG2_10X_SVrefine210Xhap12_2693:HG2_PB_SVrefine2Falcon2Bionano_1684:HG2_PB_SVrefine2Falcon1plusDovetail_8183:HG2_PB_pbsv_3625;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2658:HG4_Ill_SVrefine2DISCOVARDovetail_2779;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0364322;ClusterMaxSizeDiff=0.0354551;ClusterMaxEditDist=0.0938023;PBcalls=6;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=7043;DistBack=146636;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=3:127859143-127859146;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:45:./.:12:12:13:6:./.:0:0:0:0:0/1:21:13:0/1:235:353:.:7126:.
chr3	128376185	HG4_PB_SVrefine2Falcon1Dovetail_2198	T	TCTGCCTCAGCATCCTGAGTAACTGGGATTACAGGCGCACACCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTTACCATGTTGGTCAGGCTGGTCTGGAACTTCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGGGCAGCCACCACCCCGGCCCCTTTTCTTTTCTTTTCTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGAGATTTCTACTCACTGCAACCTCTGCCTCCCCGGTTTAAGTGATTCTCCTGCCTCAGCCTCCCAAGTACCTGGGATTACAGGTGCCTACCACCACACCCGGCTATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCTAGGCTGGTCTCGACTCCTGACCTTAGGTGATCCACCCGCTGCAGCCTCCCAAAATGCTGGGATTACAGGCATGAGCCACTGCGCCTTCCTCTTTTTTTTTTTTTTTTTTTTTTTATTATTATTAAGACAGAGTCTTGCTTCATTGCCGAGGCTGGAGTACAGTGGCATGATCTCGGCTCACTGCAACATTTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGAGACTAAAGGCACCCGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTTACTACATTGTCAGGCTGGTTTTGAATTCCTGATTTCAAGTGATCCGCTCACCTTAGCCTCCCAAAGTGCTGGGATTACAGATGTAAGCCACTGTGCCAGGCCCATTTTTCTTTCTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCCCAGCCTCCCGAGTAGCTGGAACTACAGGCACCCGCCACCATGCCCGGCTATTTTTCTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCTGCCTAGGCCTCCCAAAGTGCTGGATTACAGGCATGAACCACGGCGCCCAGCCCGTTTTTTCGTTTAAAACTTTTCTGGGCTGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAGTACAAAAATTAGCTGGGCATGGTGGCACGTGCCTGTAATCCAGCCACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGATTGCAGTTGCCGAGATCACGCCACAGCACTCCAGCCTGGTGACATAGCGAGACTCCATCTCAAAAAATAAAAATAAAAAAATAAAAAATAAAAAATAAATTAAAAAAACTTTTCTGGGAGGCTGAATCAGGAGGATTGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGGCAACATGGTGAAAACAAGTCTCTACAAAAAAATTTTTTAAAGTGAAAAATTATCTGGCTCACACCTGTAGTCTCAGCTACTGGGGAGGCTGAAGCAGGAGTAACACTTGAGCCCGGGAAGTTGGGTTCCTGGCTGCACAGACCTATGATTGTGCATACTGCCCTCTAGCCTGGGCGACAAAGCAAGACCCTGTCTCTAAAAAACAATTAAAGTTGCTTTTCTTCGTTTTACCTTCTATTTGTCTTAAAGCATTATTGTTTGTTGTTATTCACTCTAATCCATCTAGCTTAGCCTTAATTCCTAAAATACTTCTTTTATTTCTAAATTTATTCCTGATTTCTATCTTTTTTCTGAATTTTTCTAATTATTGTTTACATTGTTCTTGCATGACTTGTGTCATTTTCTTAATACGTTTAGCTTGTTTTGGAATAGCAGGAGCAGTCTCCTGGTTCGTTTTTATGGGCCTCTTGCTGGCATGTTTTCATTTTCTTATAGAGTTGTTCTCTTTTTCATCCCATTTTCTGATACAACTTATTCTAACAGTGAGGGATACCCTTACTCTTTTGTGTTGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGAGCTTTGCTCTTGTTTCCAGGCTGGAGTGCAATGTCATGATCTTGGCTCACTGTAACCACTGCTTCCGGGTTCCAGCGATTCTCCTACCTCAGCCTCCCAAGTAGCTGGGATTACAGCCCTGTGCCACCATCCCCGGCTAATTTTTGTAGTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCTGC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2198:HG2_PB_pbsv_3630:HG4_PB_pbsv_3656:HG2_PB_HySA_6915:HG3_PB_pbsv_3554:HG2_PB_PB10Xdip_19914:HG4_PB_HySA_5457:HG2_PB_HySA_6914:HG3_PB_SVrefine2Falcon1Dovetail_2262:HG3_PB_HySA_5650:HG2_PB_HySA_6913:HG2_PB_assemblyticsPBcR_17589:HG3_PB_SVrefine2Falcon1Dovetail_2261:HG2_PB_SVrefine2Falcon1plusDovetail_8185:HG2_PB_SVrefine2PBcRplusDovetail_7596:HG2_PB_SVrefine2PB10Xhap12_2660:HG3_PB_SVrefine2PBcRDovetail_1673:HG4_PB_SVrefine2PBcRDovetail_1874:HG2_PB_SVrefine2Falcon2Bionano_1687;NumClusterSVs=19;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_2198;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0891318;ClusterMaxSizeDiff=0.0891318;ClusterMaxEditDist=0.19906;PBcalls=19;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=2338;DistBack=6291;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=3:128376186-128376239;PctSeqSimilarity=0.9944;PctSizeSimilarity=0.9945;PctRecOverlap=0.977;SizeDiff=-13;StartDistance=-48;EndDistance=-48;GTMatch=0;TruScore=98;MatchId=3777.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:82:1/1:0:26:1:24:./.:0:0:0:0:1/1:0:10:1/1:13:337:.:.:.
chr3	128395208	HG4_Ill_MetaSV_3475	T	TAATAAAGGACTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_2447:HG3_PB_pbsv_3555:HG2_PB_pbsv_3631:HG3_Ill_MetaSV_3503:HG4_PB_pbsv_3657:HG3_Ill_GATKHCSBGrefine_2448:HG2_PB_SVrefine2Falcon1plusDovetail_8186:HG3_PB_SVrefine2Falcon1Dovetail_2263:HG4_Ill_MetaSV_3475:HG4_Ill_GATKHCSBGrefine_2540:HG2_Ill_MetaSV_3329;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2447:HG4_Ill_MetaSV_3475:HG4_Ill_GATKHCSBGrefine_2540:HG2_Ill_MetaSV_3329;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0534591;ClusterMaxSizeDiff=0.0503145;ClusterMaxEditDist=0.20743;PBcalls=5;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=310;DistBack=150;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:128395209-128385713;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3778.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:25:0|1:26:3:2:17:./.:0:0:0:0:0/1:18:12:./.:4:32:.:.:.
chr3	129938424	HG4_PB_pbsv_3670	T	TTTCAGGGGCCGGAGCGGTGCTCACGCTGTATCCCAGCACTTTTGGAGGCGAGGCGGCGGATCACGACGGTCAGAGACGAGAACCATCCTGGCTAACACTGGTAAACCCCGCTCTCTACTAAAAATACAAAAAATTAGTCGCCGGGCGACGGTGCGCCGGCGGCGCCTGTAGTCCAAGCTACCTCGGGAGCGTGAGGCAGGAGGCAGAATGGCCGTGAAACCCCAGAGGGGCGGAGCCTGCCAGTGAGCCGAGATCTGCGCCACTGCACTCCCAGCCTTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAC	10	PASS	ClusterIDs=HG2_PB_pbsv_3640:HG2_PB_assemblyticsfalcon_18189:HG3_PB_pbsv_3566:HG2_PB_PB10Xdip_19918:HG4_PB_pbsv_3670:HG3_PB_HySA_5660:HG3_PB_SVrefine2PBcRDovetail_1680:HG4_PB_SVrefine2PBcRDovetail_1877:HG2_PB_SVrefine2Falcon1plusDovetail_8190:HG4_PB_SVrefine2Falcon1Dovetail_2208:HG3_PB_SVrefine2Falcon1Dovetail_2268:HG2_PB_HySA_6936:HG4_PB_HySA_5482:HG2_PB_assemblyticsPBcR_17598:HG2_PB_SVrefine2PB10Xhap12_2667:HG2_PB_SVrefine2PBcRplusDovetail_7601:HG2_PB_SVrefine2Falcon2Bionano_1691;NumClusterSVs=17;ExactMatchIDs=HG4_PB_pbsv_3670;NumExactMatchSVs=1;ClusterMaxShiftDist=0.152648;ClusterMaxSizeDiff=0.152648;ClusterMaxEditDist=0.224299;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=336;DistBack=10156;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:129938425-129938424;PctSeqSimilarity=0.9316;PctSizeSimilarity=0.9554;PctRecOverlap=0.9525;SizeDiff=15;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=94;MatchId=3779.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:3:87:1/1:0:24:3:37:./.:0:0:0:0:0/1:14:8:0/1:12:24:.:.:.
chr3	131511452	HG2_PB_SVrefine2PBcRplusDovetail_7604	T	TGTGTGTATATGTATATATATATACACACGTGTATATATGTATATATATACACACGTGTATATATATACATATATACACACGTGTATATATATACATATATACACACGTGTATATATATACATATATACACAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7604:HG3_PB_HySA_5671:HG2_PB_SVrefine2PB10Xhap12_2671:HG2_PB_SVrefine2Falcon1plusDovetail_8194:HG3_PB_HySA_5672:HG3_Ill_250bpfermikitraw_4947:HG2_PB_pbsv_3645:HG3_PB_pbsv_3574:HG4_Ill_SVrefine2DISCOVARDovetail_2785:HG3_Ill_SVrefine2DISCOVARDovetail_2787;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7604:HG4_Ill_SVrefine2DISCOVARDovetail_2785:HG3_Ill_SVrefine2DISCOVARDovetail_2787;NumExactMatchSVs=3;ClusterMaxShiftDist=0.238095;ClusterMaxSizeDiff=0.231293;ClusterMaxEditDist=0.335616;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=132;DistBack=30;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=189;REFWIDENED=3:131511453-131511641;PctSeqSimilarity=0.9204;PctSizeSimilarity=0.8354;PctRecOverlap=0.5723;SizeDiff=-26;StartDistance=-55;EndDistance=-55;GTMatch=0;TruScore=77;MatchId=3782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:29:./.:20:19:2:8:./.:0:0:0:0:0/1:28:11:./.:.:.:.:.:.
chr3	131891768	HG2_Ill_GATKHCSBGrefine_2456	A	AGGCAAGAGGACAACTTGAGACCAGGAATTTGAGACCAGCCTGGGCAACATAGCAATACCCTCATCTGTAATATATATATATATATATATATATATATATATATATATATATATATAAACTTAGCTG	20	PASS	ClusterIDs=HG4_PB_pbsv_3681:HG3_PB_HySA_5674:HG3_PB_assemblyticsfalcon_18091:HG2_PB_assemblyticsfalcon_18204:HG2_PB_assemblyticsPBcR_17610:HG3_PB_pbsv_3578:HG2_Ill_breakscan11_3364:HG2_PB_pbsv_3649:HG2_PB_PB10Xdip_19930:HG4_PB_HySA_5494:HG3_PB_SVrefine2Falcon1Dovetail_2272:HG3_PB_SVrefine2PBcRDovetail_1690:HG2_PB_SVrefine2Falcon1plusDovetail_8198:HG3_Ill_Spiral_3992:HG2_PB_SVrefine2Falcon2Bionano_1696:HG2_PB_SVrefine2PBcRplusDovetail_7608:HG2_PB_SVrefine2PB10Xhap12_2676:HG4_Ill_GATKHCSBGrefine_2555:HG2_Ill_manta_1032:HG2_Ill_SVrefine2DISCOVARplusDovetail_8827:HG2_Ill_GATKHCSBGrefine_2456:HG4_PB_SVrefine2PBcRDovetail_1883:HG3_Ill_manta_827:HG3_Ill_GATKHCSBGrefine_2472:HG2_PB_HySA_6946;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2456:HG2_Ill_SVrefine2DISCOVARplusDovetail_8827:HG2_Ill_manta_1032:HG4_Ill_GATKHCSBGrefine_2555;NumExactMatchSVs=4;ClusterMaxShiftDist=0.16092;ClusterMaxSizeDiff=0.16092;ClusterMaxEditDist=0.234375;PBcalls=17;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=126;DistBack=102276;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=3:131891764-131891772;PctSeqSimilarity=0.9961;PctSizeSimilarity=0.9921;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:1:32:1:18:./.:0:0:0:0:1/1:0:21:./.:.:.:.:.:.
chr3	131934115	HG2_Ill_SVrefine2DISCOVARplusDovetail_8828	A	ATATATAATACAGATATAATATATACCTGGTATATATTATATAATACAGATATAATATATACCTGGTATATATTATATAATACAGATATAATATATACCTGGTATATATTATATAATACAGATATAATATATACCTGGTATATATTATATAATACAGATATAATATATTCCTTGTATATAT	20	PASS	ClusterIDs=HG2_PB_pbsv_3650:HG2_PB_SVrefine2PB10Xhap12_2677:HG4_PB_pbsv_3683:HG2_PB_SVrefine2Falcon2Bionano_1697:HG2_PB_SVrefine2PBcRplusDovetail_7609:HG3_PB_pbsv_3579:HG2_Ill_SVrefine2DISCOVARplusDovetail_8828:HG2_PB_SVrefine2Falcon1plusDovetail_8199:HG4_PB_SVrefine2Falcon1Dovetail_2216;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8828:HG2_PB_SVrefine2PBcRplusDovetail_7609;NumExactMatchSVs=2;ClusterMaxShiftDist=0.220551;ClusterMaxSizeDiff=0.195489;ClusterMaxEditDist=0.365432;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=180;DistBack=14808;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=875;REFWIDENED=3:131934116-131934990;PctSeqSimilarity=0.942;PctSizeSimilarity=0.8333;PctRecOverlap=0.1244;SizeDiff=-36;StartDistance=-172;EndDistance=-172;GTMatch=0;TruScore=63;MatchId=3784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:69:1/1:3:11:1:7:./.:0:0:0:0:0/1:3:16:./.:.:.:.:.:.
chr3	131936139	HG2_PB_SVrefine2Falcon2Bionano_1698	A	ATAGGACTCGGGCCTTATTGGACCTCTGTAATTACTGGAGCAGCTTGGTGTCAGGATGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2678:HG2_PB_pbsv_3651:HG3_PB_pbsv_3580:HG2_PB_HySA_6950:HG2_PB_SVrefine2PBcRplusDovetail_7610:HG4_PB_SVrefine2Falcon1Dovetail_2217:HG3_Ill_svaba_4693:HG3_Ill_manta_828:HG3_Ill_SVrefine2DISCOVARDovetail_2792:HG3_Ill_Krunchall_5107:HG3_Ill_GATKHC_6115:HG3_Ill_GATKHCSBGrefine_2473:HG3_Ill_250bpfermikitraw_4950:HG3_Ill_150bpfermikitraw_4783:HG2_PB_SVrefine2Falcon2Bionano_1698:HG2_Ill_svaba_4613:HG2_Ill_manta_1033:HG2_Ill_Krunchall_5172:HG2_Ill_GATKHC_6044:HG2_Ill_GATKHCSBGrefine_2457:HG2_Ill_250bpfermikitraw_5076:HG2_Ill_150bpfermikitraw_4709:HG2_10X_SVrefine210Xhap12_2714;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2714:HG2_Ill_150bpfermikitraw_4709:HG2_Ill_250bpfermikitraw_5076:HG2_Ill_GATKHCSBGrefine_2457:HG2_Ill_GATKHC_6044:HG2_Ill_Krunchall_5172:HG2_Ill_manta_1033:HG2_Ill_svaba_4613:HG2_PB_SVrefine2Falcon2Bionano_1698:HG3_Ill_150bpfermikitraw_4783:HG3_Ill_250bpfermikitraw_4950:HG3_Ill_GATKHCSBGrefine_2473:HG3_Ill_GATKHC_6115:HG3_Ill_Krunchall_5107:HG3_Ill_SVrefine2DISCOVARDovetail_2792:HG3_Ill_manta_828:HG3_Ill_svaba_4693;NumExactMatchSVs=17;ClusterMaxShiftDist=0.134454;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.192;PBcalls=7;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=58;DistBack=-1;DistForward=57;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=3:131936140-131936197;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:39:./.:3:15:10:5:./.:0:0:0:0:0/1:21:20:./.:.:.:.:.:.
chr3	132848793	HG4_Ill_MetaSV_3484	T	TTGTTAACAAAATTTACTCAATTACCGTATCCACCTTTCATTTTAGGCCGTAATTTATGTTGGTGCTGACAGAGTGATATCAGGTGTCCTCAAATCCAGTGGAAACAAAATGAAATCACCGGGCTCTACATATTATCTGCTATTGACTATTAGTGGAAAGTAATCAGATTTTAGACAATAGCAGATAATATGTAGAGCCCGGTGATTTCATTTTGTTTCCACTGGATTTGAGGACACCTGATATCACTCTGTCAGCACCAACATAAATTACGGCCTAAAATGAAAGGTGGATACGGTAATTGAGTAAATTTTGTTAACAAGCAGAGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_19941:HG4_PB_pbsv_3684:HG3_PB_pbsv_3581:HG2_PB_pbsv_3652:HG3_PB_assemblyticsfalcon_18101:HG2_PB_assemblyticsfalcon_18215:HG2_PB_assemblyticsPBcR_17619:HG4_PB_assemblyticsfalcon_17807:HG3_Ill_manta_829:HG2_Ill_manta_1034:HG3_PB_SVrefine2Falcon1Dovetail_2274:HG4_PB_SVrefine2PBcRDovetail_1884:HG4_Ill_SVrefine2DISCOVARDovetail_2787:HG4_Ill_MetaSV_3484:HG4_Ill_GATKHCSBGrefine_2556:HG3_Ill_MetaSV_3510:HG2_PB_SVrefine2PBcRplusDovetail_7611:HG2_PB_SVrefine2PB10Xhap12_2680:HG2_PB_SVrefine2Falcon1plusDovetail_8200:HG2_Ill_SVrefine2DISCOVARplusDovetail_8829:HG2_Ill_MetaSV_3339:HG4_PB_SVrefine2Falcon1Dovetail_2218:HG3_PB_SVrefine2PBcRDovetail_1691:HG3_Ill_SVrefine2DISCOVARDovetail_2794:HG3_Ill_GATKHCSBGrefine_2474:HG2_PB_SVrefine2Falcon2Bionano_1699:HG2_Ill_GATKHCSBGrefine_2458;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_MetaSV_3339:HG2_Ill_SVrefine2DISCOVARplusDovetail_8829:HG2_PB_SVrefine2Falcon1plusDovetail_8200:HG2_PB_SVrefine2PB10Xhap12_2680:HG2_PB_SVrefine2PBcRplusDovetail_7611:HG3_Ill_MetaSV_3510:HG4_Ill_GATKHCSBGrefine_2556:HG4_Ill_MetaSV_3484:HG4_Ill_SVrefine2DISCOVARDovetail_2787:HG4_PB_SVrefine2PBcRDovetail_1884;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0874811;ClusterMaxSizeDiff=0.0874811;ClusterMaxEditDist=0.206186;PBcalls=16;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=327;DistBack=46778;DistForward=13971;DistMin=13971;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=3:132848794-132848800;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3786.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:91:1/1:0:40:1:26:./.:0:0:0:0:1/1:0:32:1/1:2:48:.:.:.
chr3	133279612	HG4_Ill_Krunchall_5396	G	GCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGTTTCGTTGTTGTTGTTGCCAGACTGGTCTCAAACTCCTGGACTCAAGCAATTCACCCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2715:HG2_PB_pbsv_3655:HG4_PB_HySA_5505:HG2_PB_HySA_6972:HG4_PB_pbsv_3687:HG4_Ill_manta_888:HG4_Ill_Krunchall_5396:HG4_Ill_GATKHC_6162:HG4_Ill_GATKHCSBGrefine_2559:HG4_Ill_250bpfermikitraw_5164:HG2_Ill_manta_1035:HG2_Ill_Krunchall_5188:HG2_Ill_GATKHC_6066:HG2_Ill_GATKHCSBGrefine_2461:HG2_Ill_250bpfermikitraw_5093:HG2_PB_SVrefine2Falcon1plusDovetail_8202;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5093:HG2_Ill_GATKHCSBGrefine_2461:HG2_Ill_GATKHC_6066:HG2_Ill_Krunchall_5188:HG2_Ill_manta_1035:HG4_Ill_250bpfermikitraw_5164:HG4_Ill_GATKHCSBGrefine_2559:HG4_Ill_GATKHC_6162:HG4_Ill_Krunchall_5396:HG4_Ill_manta_888;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0864865;ClusterMaxSizeDiff=0.0748663;ClusterMaxEditDist=0.21164;PBcalls=5;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=93;DistBack=-26;DistForward=5;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=61;REFWIDENED=3:133279578-133279638;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:21:0|1:40:1:2:18:./.:0:0:0:0:0/1:23:18:./.:.:.:.:.:.
chr3	133777300	HG2_Ill_Krunchall_5195	C	CAGCTTCACTGCTGACATCAAGCCACAGGGGTGCTGCTGTGACTTGATGTCAGCAGTGA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8835:HG4_PB_pbsv_3689:HG2_PB_pbsv_3657:HG2_PB_PB10Xdip_19945:HG2_PB_assemblyticsfalcon_18226:HG4_PB_assemblyticsfalcon_17817:HG4_Ill_svaba_4726:HG4_Ill_manta_889:HG4_Ill_Krunchall_5400:HG4_Ill_GATKHC_6166:HG4_Ill_GATKHCSBGrefine_2560:HG4_Ill_Cortex_2461:HG4_Ill_250bpfermikitraw_5167:HG4_Ill_150bpfermikitraw_4907:HG3_PB_assemblyticsfalcon_18112:HG3_Ill_svaba_4710:HG3_Ill_manta_830:HG3_Ill_Spiral_4011:HG3_Ill_Krunchall_5130:HG3_Ill_GATKHC_6141:HG3_Ill_GATKHCSBGrefine_2476:HG3_Ill_Cortex_2480:HG3_Ill_250bpfermikitraw_4969:HG3_Ill_150bpfermikitraw_4805:HG2_PB_assemblyticsPBcR_17630:HG2_Ill_svaba_4632:HG2_Ill_manta_1036:HG2_Ill_SpiralSDKrefine_11439:HG2_Ill_Krunchall_5195:HG2_Ill_GATKHC_6073:HG2_Ill_GATKHCSBGrefine_2462:HG2_Ill_Cortex_5803:HG2_Ill_250bpfermikitraw_5099:HG2_Ill_150bpfermikitraw_4732:HG2_PB_HySA_6975:HG2_Ill_breakscan11_3365:HG3_PB_pbsv_3584:HG4_PB_SVrefine2PBcRDovetail_1887:HG4_Ill_SVrefine2DISCOVARDovetail_2793;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4732:HG2_Ill_250bpfermikitraw_5099:HG2_Ill_Cortex_5803:HG2_Ill_GATKHCSBGrefine_2462:HG2_Ill_GATKHC_6073:HG2_Ill_Krunchall_5195:HG2_Ill_SpiralSDKrefine_11439:HG2_Ill_manta_1036:HG2_Ill_svaba_4632:HG2_PB_assemblyticsPBcR_17630:HG3_Ill_150bpfermikitraw_4805:HG3_Ill_250bpfermikitraw_4969:HG3_Ill_Cortex_2480:HG3_Ill_GATKHCSBGrefine_2476:HG3_Ill_GATKHC_6141:HG3_Ill_Krunchall_5130:HG3_Ill_Spiral_4011:HG3_Ill_manta_830:HG3_Ill_svaba_4710:HG3_PB_assemblyticsfalcon_18112:HG4_Ill_150bpfermikitraw_4907:HG4_Ill_250bpfermikitraw_5167:HG4_Ill_Cortex_2461:HG4_Ill_GATKHCSBGrefine_2560:HG4_Ill_GATKHC_6166:HG4_Ill_Krunchall_5400:HG4_Ill_manta_889:HG4_Ill_svaba_4726:HG4_PB_assemblyticsfalcon_17817;NumExactMatchSVs=29;ClusterMaxShiftDist=0.114754;ClusterMaxSizeDiff=0.0983607;ClusterMaxEditDist=0.241935;PBcalls=10;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=2679;DistForward=5434;DistMin=2679;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=24;REFWIDENED=3:133777290-133777313;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3788.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:34:1/1:0:16:1:14:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr3	134294124	HG4_Ill_SVrefine2DISCOVARDovetail_2797	C	CTCCCTTCCTCCCTTTCTTCCTTTCTTTCCTTTTTTCTTTCTTTCTTTGGAGACAGGGTCTCACTCTATGGCCCTCTTTCTCCCTCCCTCCCTCCCTCCCTTTTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1694:HG4_PB_HySA_5510:HG4_PB_pbsv_3691:HG2_PB_PB10Xdip_19947:HG4_Ill_GATKHC_6171:HG3_Ill_GATKHC_6146:HG2_Ill_GATKHC_6079:HG3_PB_pbsv_3586:HG2_PB_HySA_6982:HG2_PB_HySA_6981:HG2_PB_pbsv_3659:HG2_PB_HySA_6980:HG4_PB_SVrefine2PBcRDovetail_1888:HG2_PB_SVrefine2Falcon1plusDovetail_8204:HG3_PB_SVrefine2Falcon1Dovetail_2276:HG4_Ill_SVrefine2DISCOVARDovetail_2797:HG3_Ill_SVrefine2DISCOVARDovetail_2800:HG2_PB_SVrefine2PBcRplusDovetail_7614:HG2_PB_SVrefine2PB10Xhap12_2684:HG2_PB_SVrefine2Falcon2Bionano_1702:HG2_Ill_SVrefine2DISCOVARplusDovetail_8838:HG4_PB_SVrefine2Falcon1Dovetail_2221;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8838:HG2_PB_SVrefine2Falcon2Bionano_1702:HG2_PB_SVrefine2PB10Xhap12_2684:HG2_PB_SVrefine2PBcRplusDovetail_7614:HG3_Ill_SVrefine2DISCOVARDovetail_2800:HG4_Ill_SVrefine2DISCOVARDovetail_2797:HG4_PB_SVrefine2PBcRDovetail_1888;NumExactMatchSVs=7;ClusterMaxShiftDist=0.219895;ClusterMaxSizeDiff=0.219895;ClusterMaxEditDist=0.319149;PBcalls=16;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=104;DistBack=27667;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=343;REFWIDENED=3:134294125-134294467;PctSeqSimilarity=0.9572;PctSizeSimilarity=0.9231;PctRecOverlap=0.1429;SizeDiff=8;StartDistance=-86;EndDistance=-86;GTMatch=0;TruScore=67;MatchId=3789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:8:35:1/1:4:19:2:8:./.:0:0:0:0:./.:1:2:./.:.:.:.:.:.
chr3	135140334	HG4_Ill_250bpfermikitraw_5182	A	ATATATATACATGTATATATACATATACATGTATATATATGTATATACATATACATATATATACATGTATATG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8845:HG4_PB_HySA_5522:HG4_PB_pbsv_3696:HG2_PB_HySA_6993:HG3_PB_pbsv_3593:HG2_PB_PB10Xdip_19957:HG4_Ill_svaba_4739:HG4_Ill_manta_891:HG4_Ill_Krunchall_5415:HG4_Ill_GATKHC_6182:HG4_Ill_GATKHCSBGrefine_2564:HG4_Ill_250bpfermikitraw_5182:HG4_Ill_150bpfermikitraw_4922:HG3_Ill_svaba_4722:HG3_Ill_manta_832:HG3_Ill_Spiral_4023:HG3_Ill_GATKHC_6158:HG3_Ill_GATKHCSBGrefine_2482:HG3_Ill_250bpfermikitraw_4982:HG3_Ill_150bpfermikitraw_4820:HG2_Ill_svaba_4645:HG2_Ill_manta_1038:HG2_Ill_SpiralSDKrefine_11451:HG2_Ill_Krunchall_5212:HG2_Ill_GATKHC_6089:HG2_Ill_GATKHCSBGrefine_2466:HG2_Ill_250bpfermikitraw_5114:HG2_Ill_150bpfermikitraw_4747:HG2_PB_pbsv_3663:HG2_10X_SVrefine210Xhap12_2724:HG4_PB_SVrefine2PBcRDovetail_1892:HG4_PB_SVrefine2Falcon1Dovetail_2225:HG4_Ill_SVrefine2DISCOVARDovetail_2800:HG3_PB_SVrefine2PBcRDovetail_1698:HG3_PB_SVrefine2Falcon1Dovetail_2279:HG3_Ill_SVrefine2DISCOVARDovetail_2807:HG2_PB_SVrefine2PBcRplusDovetail_7619:HG2_PB_SVrefine2PB10Xhap12_2691:HG2_PB_SVrefine2Falcon2Bionano_1707:HG2_PB_SVrefine2Falcon1plusDovetail_8209;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4747:HG2_Ill_250bpfermikitraw_5114:HG2_Ill_GATKHCSBGrefine_2466:HG2_Ill_GATKHC_6089:HG2_Ill_Krunchall_5212:HG2_Ill_SpiralSDKrefine_11451:HG2_Ill_manta_1038:HG2_Ill_svaba_4645:HG3_Ill_150bpfermikitraw_4820:HG3_Ill_250bpfermikitraw_4982:HG3_Ill_GATKHCSBGrefine_2482:HG3_Ill_GATKHC_6158:HG3_Ill_Spiral_4023:HG3_Ill_manta_832:HG3_Ill_svaba_4722:HG4_Ill_150bpfermikitraw_4922:HG4_Ill_250bpfermikitraw_5182:HG4_Ill_GATKHCSBGrefine_2564:HG4_Ill_GATKHC_6182:HG4_Ill_Krunchall_5415:HG4_Ill_manta_891:HG4_Ill_svaba_4739;NumExactMatchSVs=22;ClusterMaxShiftDist=0.119205;ClusterMaxSizeDiff=0.119205;ClusterMaxEditDist=0.18543;PBcalls=14;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=72;DistBack=-37;DistForward=11;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=3:135140318-135140371;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:95:1/1:1:18:0:11:./.:0:0:0:0:0/1:14:29:./.:.:.:.:.:.
chr3	136612038	HG2_Ill_GATKHCSBGrefine_2467	A	ACACACACACACACACACACCATATTTTCTTTACCCATTCGTTAATTGATGGACATTTGGGCTGGTTCCATATTTTTGCAGTTGTGAATTGTGCTGCTGTAAACATG	20	PASS	ClusterIDs=HG2_PB_HySA_6998:HG4_PB_HySA_5528:HG4_PB_pbsv_3699:HG4_PB_assemblyticsfalcon_17840:HG4_PB_SVrefine2PBcRDovetail_1894:HG4_PB_SVrefine2Falcon1Dovetail_2227:HG4_Ill_manta_892:HG4_Ill_SVrefine2DISCOVARDovetail_2809:HG4_Ill_GATKHCSBGrefine_2565:HG2_Ill_GATKHCSBGrefine_2467:HG2_10X_SVrefine210Xhap12_2731:HG2_PB_pbsv_3666;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2731:HG2_Ill_GATKHCSBGrefine_2467:HG4_Ill_GATKHCSBGrefine_2565:HG4_Ill_SVrefine2DISCOVARDovetail_2809:HG4_Ill_manta_892:HG4_PB_SVrefine2Falcon1Dovetail_2227:HG4_PB_SVrefine2PBcRDovetail_1894;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0900901;ClusterMaxSizeDiff=0.0900901;ClusterMaxEditDist=0.213333;PBcalls=7;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=106;DistBack=16;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:136612039-136612040;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3791.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:15:0|1:30:1:0:14:./.:0:0:0:0:0/1:28:14:./.:.:.:.:.:.
chr3	137003255	HG2_Ill_150bpfermikitraw_4752	C	CATGATGAAATGAAATACAGCATCTTATGTCTCTCTCAAATTGGATCTAAGTACTCCAGTCCAAATATTATCAGCAATATTATCAGTCAACAAATAATATACTCAACAAAAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3366:HG3_PB_pbsv_3596:HG4_PB_HySA_5530:HG4_PB_pbsv_3700:HG2_PB_pbsv_3667:HG2_PB_HySA_7000:HG4_PB_assemblyticsfalcon_17841:HG3_PB_assemblyticsfalcon_18132:HG2_PB_assemblyticsfalcon_18242:HG2_PB_assemblyticsPBcR_17649:HG4_PB_SVrefine2PBcRDovetail_1895:HG4_PB_SVrefine2Falcon1Dovetail_2228:HG4_Ill_svaba_4751:HG4_Ill_manta_893:HG4_Ill_SVrefine2DISCOVARDovetail_2812:HG4_Ill_MetaSV_3488:HG4_Ill_GATKHCSBGrefine_2566:HG4_Ill_Cortex_2466:HG3_PB_SVrefine2PBcRDovetail_1700:HG3_PB_SVrefine2Falcon1Dovetail_2281:HG3_Ill_svaba_4729:HG3_Ill_manta_833:HG3_Ill_Spiral_4026:HG3_Ill_SVrefine2DISCOVARDovetail_2816:HG3_Ill_MetaSV_3513:HG3_Ill_GATKHCSBGrefine_2483:HG3_Ill_Cortex_2484:HG2_PB_SVrefine2PBcRplusDovetail_7621:HG2_PB_SVrefine2PB10Xhap12_2693:HG2_PB_SVrefine2Falcon2Bionano_1709:HG2_PB_SVrefine2Falcon1plusDovetail_8211:HG2_Ill_svaba_4652:HG2_Ill_manta_1040:HG2_Ill_SpiralSDKrefine_11457:HG2_Ill_SVrefine2DISCOVARplusDovetail_8851:HG2_Ill_MetaSV_3342:HG2_Ill_GATKHCSBGrefine_2468:HG2_Ill_Cortex_5813:HG2_Ill_250bpfermikitraw_5119:HG2_Ill_150bpfermikitraw_4752:HG2_10X_SVrefine210Xhap12_2733:HG2_PB_PB10Xdip_19959:HG3_PB_HySA_5715;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2733:HG2_Ill_150bpfermikitraw_4752:HG2_Ill_250bpfermikitraw_5119:HG2_Ill_Cortex_5813:HG2_Ill_GATKHCSBGrefine_2468:HG2_Ill_MetaSV_3342:HG2_Ill_SVrefine2DISCOVARplusDovetail_8851:HG2_Ill_SpiralSDKrefine_11457:HG2_Ill_manta_1040:HG2_Ill_svaba_4652:HG2_PB_SVrefine2Falcon1plusDovetail_8211:HG2_PB_SVrefine2Falcon2Bionano_1709:HG2_PB_SVrefine2PB10Xhap12_2693:HG2_PB_SVrefine2PBcRplusDovetail_7621:HG3_Ill_Cortex_2484:HG3_Ill_GATKHCSBGrefine_2483:HG3_Ill_MetaSV_3513:HG3_Ill_SVrefine2DISCOVARDovetail_2816:HG3_Ill_Spiral_4026:HG3_Ill_manta_833:HG3_Ill_svaba_4729:HG3_PB_SVrefine2Falcon1Dovetail_2281:HG3_PB_SVrefine2PBcRDovetail_1700:HG4_Ill_Cortex_2466:HG4_Ill_GATKHCSBGrefine_2566:HG4_Ill_MetaSV_3488:HG4_Ill_SVrefine2DISCOVARDovetail_2812:HG4_Ill_manta_893:HG4_Ill_svaba_4751:HG4_PB_SVrefine2Falcon1Dovetail_2228:HG4_PB_SVrefine2PBcRDovetail_1895;NumExactMatchSVs=31;ClusterMaxShiftDist=0.121739;ClusterMaxSizeDiff=0.121739;ClusterMaxEditDist=0.240664;PBcalls=19;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=111;DistBack=929;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:137003256-137003258;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3792.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:73:./.:0:20:0:0:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr3	137845369	HG2_PB_HySA_7004	T	TATAAAAATTGTCACATTGTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCCCCCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCCACGGTCTCCCTCTGATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCACCGCCACGCCTGACTGGTTTTCGTTTTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAGCCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAGGTGAGGAGCGTCTCTGCCTGGCCGCCATCCCATCTGGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAACCACCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGCGGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGACGCCCCGTCCAGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGTTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCGGGAGGGAGGTGGGGGGGTCATCCCCCACCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGTCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGAAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGGGGGGGGTCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGTCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGACAGCCCCCCCGCCCAGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGTCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTCTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAATTAATTAATTAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_19960:HG3_PB_pbsv_3598:HG2_PB_pbsv_3669:HG4_PB_assemblyticsfalcon_17846:HG3_PB_assemblyticsfalcon_18139:HG2_PB_assemblyticsPBcR_17654:HG2_PB_assemblyticsfalcon_18247:HG2_PB_HySA_7004:HG4_PB_HySA_5531:HG3_PB_SVrefine2Falcon1Dovetail_2284:HG2_PB_SVrefine2Falcon2Bionano_1710:HG3_PB_SVrefine2PBcRDovetail_1702:HG2_PB_SVrefine2PBcRplusDovetail_7622:HG2_PB_SVrefine2PB10Xhap12_2694:HG2_PB_SVrefine2Falcon1plusDovetail_8212:HG4_PB_SVrefine2Falcon1Dovetail_2230:HG2_Ill_breakscan11_3367;NumClusterSVs=17;ExactMatchIDs=HG2_PB_HySA_7004;NumExactMatchSVs=1;ClusterMaxShiftDist=0.068373;ClusterMaxSizeDiff=0.068373;ClusterMaxEditDist=0.198641;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=2750;DistBack=20403;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:137845370-137845370;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9917;PctRecOverlap=0.9921;SizeDiff=-23;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3793.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:101:1/1:0:14:0:13:./.:0:0:0:0:0/1:3:15:1/1:8:429:.:2756:.
chr3	138328389	HG4_Ill_GATKHCSBGrefine_2568	T	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTCTCTCCCTCTCTCTCTCCCTCCCTCTC	20	PASS	ClusterIDs=HG2_PB_HySA_7005:HG4_Ill_SVrefine2DISCOVARDovetail_2820:HG3_PB_HySA_5717:HG4_PB_HySA_5532:HG4_PB_assemblyticsfalcon_17847:HG4_Ill_GATKHC_6203:HG4_Ill_GATKHCSBGrefine_2569:HG4_Ill_GATKHC_6202:HG4_Ill_GATKHCSBGrefine_2568:HG2_Ill_GATKHC_6106:HG2_Ill_GATKHCSBGrefine_2470:HG2_PB_PB10Xdip_19961:HG4_PB_pbsv_3703:HG2_PB_SVrefine2Falcon1plusDovetail_8213:HG3_PB_SVrefine2Falcon1Dovetail_2285:HG2_Ill_GATKHC_6105:HG2_PB_pbsv_3670:HG2_PB_SVrefine2PB10Xhap12_2696:HG2_PB_assemblyticsfalcon_18248:HG3_PB_assemblyticsfalcon_18140:HG2_PB_SVrefine2PB10Xhap12_2695:HG2_PB_SVrefine2PBcRplusDovetail_7623:HG2_PB_SVrefine2Falcon2Bionano_1711:HG3_PB_SVrefine2PBcRDovetail_1703:HG2_Ill_SVrefine2DISCOVARplusDovetail_8856:HG3_PB_pbsv_3599;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2470:HG2_Ill_GATKHC_6106:HG4_Ill_GATKHCSBGrefine_2568:HG4_Ill_GATKHC_6202;NumExactMatchSVs=4;ClusterMaxShiftDist=0.391753;ClusterMaxSizeDiff=0.391753;ClusterMaxEditDist=0.391753;PBcalls=17;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=77;DistBack=-88;DistForward=27832;DistMin=-88;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=112;REFWIDENED=3:138328376-138328487;PctSeqSimilarity=0.9873;PctSizeSimilarity=0.9747;PctRecOverlap=0.9747;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=97;MatchId=3794.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:1:25:2:17:./.:0:0:0:0:1/1:1:11:./.:.:.:.:.:.
chr3	139234504	HG3_Ill_250bpfermikitraw_4995	C	CAACCTCAGGGACAGAGACCAGGGCCACAACGGTGCAGGGGTCTACAGAATATTATGCAATTTTGAGTTTTCA	20	PASS	ClusterIDs=HG2_PB_pbsv_3673:HG2_PB_HySA_7013:HG3_PB_HySA_5724:HG3_Ill_GATKHCSBGrefine_2488:HG3_PB_pbsv_3601:HG2_Ill_GATKHC_6110:HG2_Ill_GATKHCSBGrefine_2472:HG4_PB_assemblyticsfalcon_17852:HG3_Ill_svaba_4740:HG3_Ill_250bpfermikitraw_4995:HG2_Ill_svaba_4661:HG2_Ill_250bpfermikitraw_5131;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5131:HG2_Ill_svaba_4661:HG3_Ill_250bpfermikitraw_4995:HG3_Ill_svaba_4740;NumExactMatchSVs=4;ClusterMaxShiftDist=0.173913;ClusterMaxSizeDiff=0.169014;ClusterMaxEditDist=0.32;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=3878;DistForward=69;DistMin=69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=84;REFWIDENED=3:139234493-139234576;PctSeqSimilarity=0.9879;PctSizeSimilarity=0.9861;PctRecOverlap=0.8493;SizeDiff=1;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=94;MatchId=3795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:33:0|1:25:3:1:24:./.:0:0:0:0:0/1:21:33:./.:.:.:.:.:.
chr3	139302333	HG4_Ill_SVrefine2DISCOVARDovetail_2827	G	GATCTTCTGAAGCTATGGAAGTAGTTTGTGACTGTTTTGTTTCCACAAAGTTTGAATTATTTTCTTCACTTCATTTGAGAAATATAGGTGGATTGAGAGACATTCTTCATTCAAACAAAAGTTTAACAGCTATTTCTAAAACACAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8216:HG4_PB_pbsv_3709:HG2_PB_pbsv_3674:HG4_Ill_SVrefine2DISCOVARDovetail_2827:HG2_PB_SVrefine2PB10Xhap12_2699:HG2_PB_SVrefine2Falcon2Bionano_1714;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8216:HG4_Ill_SVrefine2DISCOVARDovetail_2827:HG2_PB_SVrefine2PB10Xhap12_2699:HG2_PB_SVrefine2Falcon2Bionano_1714;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0730897;ClusterMaxSizeDiff=0.0598007;ClusterMaxEditDist=0.151316;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=145;DistBack=-145;DistForward=207;DistMin=-145;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=295;REFWIDENED=3:139302334-139302628;PctSeqSimilarity=0.9967;PctSizeSimilarity=1;PctRecOverlap=0.9724;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=3796.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:48:./.:16:15:9:17:./.:0:0:0:0:0/1:20:14:./.:.:.:.:.:.
chr3	139674454	HG3_Ill_SVrefine2DISCOVARDovetail_2827	C	CTACTGACAAGGTCCTGTACATGGTCTCCACATGGCATTCAGCTTCCTGACTGGATCATGGTAGGGACAAAAATAACATCATTTAATGTTTGTAGTCCAGTGGATTGGGCTCCACCAAACTGGCTAGAGTATTTATTATGGTCAATGCTGATGTGTCAGAGATAAAATGACTTCAGGATGGTTATGCTTCTTACCTAGTGGATCAGG	20	PASS	ClusterIDs=HG2_Ill_Cortex_5816:HG4_PB_pbsv_3711:HG3_PB_pbsv_3602:HG2_PB_pbsv_3676:HG2_PB_HySA_7017:HG4_Ill_Spiral_307:HG3_Ill_Spiral_4034:HG2_PB_PB10Xdip_19971:HG2_Ill_breakscan11_3368:HG2_Ill_Spiral_256:HG4_PB_SVrefine2PBcRDovetail_1898:HG4_PB_SVrefine2Falcon1Dovetail_2232:HG4_Ill_SVrefine2DISCOVARDovetail_2829:HG3_PB_SVrefine2PBcRDovetail_1705:HG3_PB_SVrefine2Falcon1Dovetail_2286:HG2_PB_SVrefine2PBcRplusDovetail_7625:HG2_PB_SVrefine2PB10Xhap12_2700:HG2_PB_SVrefine2Falcon2Bionano_1715:HG2_PB_SVrefine2Falcon1plusDovetail_8218:HG2_10X_SVrefine210Xhap12_2739:HG4_PB_assemblyticsfalcon_17854:HG4_Ill_MetaSV_3492:HG4_Ill_GATKHCSBGrefine_2574:HG4_Ill_Cortex_2468:HG3_PB_assemblyticsfalcon_18149:HG3_Ill_SVrefine2DISCOVARDovetail_2827:HG3_Ill_MetaSV_3515:HG3_Ill_GATKHCSBGrefine_2489:HG3_Ill_Cortex_2486:HG2_PB_assemblyticsfalcon_18255:HG2_PB_assemblyticsPBcR_17663:HG2_PB_SVrefine2PBcRplusDovetail_7624:HG2_PB_SVrefine2Falcon1plusDovetail_8217:HG2_Ill_SVrefine2DISCOVARplusDovetail_8862:HG2_Ill_MetaSV_3343:HG2_Ill_GATKHCSBGrefine_2474;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_Cortex_5816:HG4_PB_assemblyticsfalcon_17854:HG4_Ill_MetaSV_3492:HG4_Ill_GATKHCSBGrefine_2574:HG4_Ill_Cortex_2468:HG3_PB_assemblyticsfalcon_18149:HG3_Ill_SVrefine2DISCOVARDovetail_2827:HG3_Ill_MetaSV_3515:HG3_Ill_GATKHCSBGrefine_2489:HG3_Ill_Cortex_2486:HG2_PB_assemblyticsfalcon_18255:HG2_PB_assemblyticsPBcR_17663:HG2_PB_SVrefine2PBcRplusDovetail_7624:HG2_PB_SVrefine2Falcon1plusDovetail_8217:HG2_Ill_SVrefine2DISCOVARplusDovetail_8862:HG2_Ill_MetaSV_3343:HG2_Ill_GATKHCSBGrefine_2474;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0521327;ClusterMaxSizeDiff=0.0473934;ClusterMaxEditDist=0.168224;PBcalls=19;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=206;DistBack=-1;DistForward=42723;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:139674455-139674454;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3797.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:92:1/1:1:38:0:25:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr3	140878318	HG4_Ill_250bpfermikitraw_5211	G	GACAAAATAGTTGGTATATAAAAGAAACTAACAGGTCCAACAGAGCTGAAGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2745:HG2_PB_pbsv_3680:HG2_PB_PB10Xdip_19972:HG4_PB_pbsv_3716:HG4_Ill_svaba_4772:HG3_PB_pbsv_3611:HG4_Ill_manta_896:HG4_Ill_Krunchall_5450:HG4_Ill_GATKHC_6220:HG4_Ill_GATKHCSBGrefine_2581:HG4_Ill_250bpfermikitraw_5211:HG4_Ill_150bpfermikitraw_4953:HG3_Ill_svaba_4752:HG3_Ill_Krunchall_5172:HG3_Ill_GATKHC_6184:HG3_Ill_GATKHCSBGrefine_2497:HG3_Ill_250bpfermikitraw_5009:HG3_Ill_150bpfermikitraw_4849:HG2_Ill_svaba_4668:HG2_Ill_manta_1043:HG2_Ill_Krunchall_5235:HG2_Ill_GATKHC_6119:HG2_Ill_GATKHCSBGrefine_2481:HG2_Ill_250bpfermikitraw_5141:HG2_Ill_150bpfermikitraw_4771:HG3_PB_HySA_5735:HG4_PB_SVrefine2PBcRDovetail_1900:HG4_PB_SVrefine2Falcon1Dovetail_2235:HG4_Ill_SVrefine2DISCOVARDovetail_2834:HG3_PB_SVrefine2Falcon1Dovetail_2292:HG2_PB_SVrefine2PBcRplusDovetail_7628:HG2_PB_SVrefine2PB10Xhap12_2702:HG2_PB_SVrefine2Falcon2Bionano_1717:HG2_PB_SVrefine2Falcon1plusDovetail_8221:HG2_Ill_SVrefine2DISCOVARplusDovetail_8868;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4771:HG2_Ill_250bpfermikitraw_5141:HG2_Ill_GATKHCSBGrefine_2481:HG2_Ill_GATKHC_6119:HG2_Ill_Krunchall_5235:HG2_Ill_manta_1043:HG2_Ill_svaba_4668:HG3_Ill_150bpfermikitraw_4849:HG3_Ill_250bpfermikitraw_5009:HG3_Ill_GATKHCSBGrefine_2497:HG3_Ill_GATKHC_6184:HG3_Ill_Krunchall_5172:HG3_Ill_svaba_4752:HG4_Ill_150bpfermikitraw_4953:HG4_Ill_250bpfermikitraw_5211:HG4_Ill_GATKHCSBGrefine_2581:HG4_Ill_GATKHC_6220:HG4_Ill_Krunchall_5450:HG4_Ill_manta_896:HG4_Ill_svaba_4772;NumExactMatchSVs=20;ClusterMaxShiftDist=0.12963;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.330275;PBcalls=12;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=51;DistBack=-41;DistForward=29899;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=3:140878309-140878366;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3798.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:15:84:1/1:10:33:4:31:./.:0:0:0:0:1/1:1:57:./.:.:.:.:.:.
chr3	141318593	HG2_PB_SVrefine2Falcon2Bionano_1718	T	TGGCAAGTGCGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2703:HG2_PB_assemblyticsfalcon_18266:HG4_PB_pbsv_3718:HG2_PB_pbsv_3681:HG2_PB_SVrefine2Falcon2Bionano_1718:HG2_PB_SVrefine2Falcon1plusDovetail_8222:HG2_Ill_GATKHCSBGrefine_2482:HG2_PB_HySA_7030:HG2_Ill_breakscan11_3369;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1718;NumExactMatchSVs=1;ClusterMaxShiftDist=0.179941;ClusterMaxSizeDiff=0.174041;ClusterMaxEditDist=0.20944;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=346;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:141318594-141318608;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9913;PctRecOverlap=0.9885;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3799.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:28:0|1:41:0:0:22:./.:0:0:0:0:0/1:24:11:0/1:10:46:.:.:.
chr3	141529211	HG2_Ill_GATKHC_6128	C	CCCTCCTTCCCTTCCTCTCTCTCCCTCTCTCTCTCTCGCCTCTTTTCTCTCTCTCTCTCCCCATT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2749:HG4_Ill_scalpel_3562:HG2_PB_pbsv_3684:HG4_PB_pbsv_3721:HG4_Ill_manta_897:HG4_Ill_GATKHC_6230:HG4_Ill_GATKHCSBGrefine_2587:HG4_Ill_250bpfermikitraw_5222:HG4_Ill_150bpfermikitraw_4963:HG2_Ill_GATKHC_6128:HG2_Ill_GATKHCSBGrefine_2484:HG2_Ill_250bpfermikitraw_5151:HG2_PB_HySA_7037:HG4_PB_assemblyticsfalcon_17867:HG4_PB_SVrefine2PBcRDovetail_1903:HG4_Ill_SVrefine2DISCOVARDovetail_2841:HG2_Ill_SVrefine2DISCOVARplusDovetail_8873;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5151:HG2_Ill_GATKHCSBGrefine_2484:HG2_Ill_GATKHC_6128:HG4_Ill_150bpfermikitraw_4963:HG4_Ill_250bpfermikitraw_5222:HG4_Ill_GATKHCSBGrefine_2587:HG4_Ill_GATKHC_6230:HG4_Ill_manta_897:HG4_Ill_scalpel_3562;NumExactMatchSVs=9;ClusterMaxShiftDist=0.193548;ClusterMaxSizeDiff=0.16129;ClusterMaxEditDist=0.292308;PBcalls=5;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=64;DistBack=9988;DistForward=13070;DistMin=9988;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=149;REFWIDENED=3:141529097-141529245;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3800.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:17:0|1:31:0:3:15:./.:0:0:0:0:0/1:24:18:./.:.:.:.:.:.
chr3	142804976	HG2_PB_SVrefine2PB10Xhap12_2706	A	ACCTCCCAGACGGGGTGGTGGCCGGGTAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCGCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCGGTGGGCTGACCCCCCCCACCTCCCTCCCTGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGAGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGGCCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGAGTGGGGGGCTGACCCCCCCACCTCCCTCCTGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8226:HG4_PB_assemblyticsfalcon_17875:HG3_PB_assemblyticsfalcon_18172:HG4_PB_SVrefine2Falcon1Dovetail_2240:HG3_PB_SVrefine2Falcon1Dovetail_2297:HG2_PB_PB10Xdip_19976:HG3_PB_pbsv_3617:HG2_PB_pbsv_3687:HG2_PB_HySA_7044:HG2_PB_SVrefine2Falcon2Bionano_1722:HG2_PB_SVrefine2PBcRplusDovetail_7633:HG2_PB_SVrefine2PB10Xhap12_2706;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2706:HG2_PB_SVrefine2PBcRplusDovetail_7633;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0405063;ClusterMaxSizeDiff=0.0379267;ClusterMaxEditDist=0.193138;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=401;DistBack=9526;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=821;REFWIDENED=3:142804977-142805797;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9975;PctRecOverlap=0.5881;SizeDiff=-1;StartDistance=-165;EndDistance=-165;GTMatch=0;TruScore=85;MatchId=3801.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:3:26:0:17:./.:0:0:0:0:0/1:3:16:./.:2:34:.:.:.
chr3	143121758	HG4_PB_SVrefine2Falcon1Dovetail_2242	T	TTTTTTGTTATTTTCTTTTTTTTTTTTTTTTTTTTTAATCCTACAAACCAAACTTTATTTTTTTTTATTTTATTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCACCGTCCCCAGAGTGTGATATTCCCCTTCCTGTGACCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTATAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCATTGCTTGTTTTTCTCAGGTTTGTCAAATATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGTCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCACATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAAACTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGCTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTCTTTATTAGTCTTGCTAGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCTCCCAGAGATTCTGGTATGTGTGTCTTTGTTCTCATTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCATAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAGGATAGTTAGCTCTTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGGGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTATTTTGCTCATTAGTTGATGCAGTTTCTTCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGAGCTCTTTTAGGGCAGGCCTGTGGTGACAAAATCTCTCAGCATTTGCTGTCTGTAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCCTTTGGGTAACCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTTATGTGTCTTGGAGTTGCTCTCTCTCGAGGAGTATTACTTTGTGGCGTTCTCTGTATTTCCTGAATCTGATGATTTGACGTTGGCCTGCTTGCTAGATTTGGGAAGTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAGTCACCCGTCTTATGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCCTCAACC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3370:HG4_PB_pbsv_3724:HG4_PB_assemblyticsfalcon_17877:HG3_PB_assemblyticsfalcon_18174:HG4_PB_SVrefine2Falcon1Dovetail_2242:HG2_PB_HySA_7047:HG2_PB_SVrefine2Falcon2Bionano_1724:HG2_PB_SVrefine2Falcon1plusDovetail_8228:HG3_PB_SVrefine2Falcon1Dovetail_2299:HG2_PB_SVrefine2PBcRplusDovetail_7635;NumClusterSVs=10;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_2242;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0773507;ClusterMaxSizeDiff=0.0773507;ClusterMaxEditDist=0.128653;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=6076;DistBack=20;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6006;REFWIDENED=3:143121759-143115443;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9972;PctRecOverlap=0.9974;SizeDiff=-17;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:51:0|1:32:0:0:34:./.:0:0:0:0:0/1:33:14:0/1:217:585:.:6029:.
chr3	143262617	HG2_PB_PB10Xdip_19985	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCGGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAACCACATTTTCT	20	PASS	ClusterIDs=HG2_PB_HySA_7048:HG2_PB_PB10Xdip_19985:HG4_PB_pbsv_3726:HG2_PB_pbsv_3690:HG4_Ill_GATKHCSBGrefine_2592:HG2_PB_SVrefine2PB10Xhap12_2709:HG2_PB_SVrefine2Falcon1plusDovetail_8231:HG2_PB_assemblyticsfalcon_18281:HG4_PB_HySA_5564;NumClusterSVs=9;ExactMatchIDs=HG2_PB_PB10Xdip_19985:HG2_PB_SVrefine2Falcon1plusDovetail_8231;NumExactMatchSVs=2;ClusterMaxShiftDist=0.133929;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.188034;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=111;DistBack=58417;DistForward=161227;DistMin=58417;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:143262606-143262619;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9823;PctRecOverlap=0.885;SizeDiff=-2;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=95;MatchId=3803.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:53:1|0:3:45:26:3:./.:0:0:0:0:0/1:26:4:./.:.:.:.:.:.
chr3	144430064	HG2_Ill_Cortex_5832	G	GTGAAATAAACTAAGACTCATTTAGAGATTTACCTACAAGCTAAAATGAGTCTTAGTTTATTTCACAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2756:HG4_PB_pbsv_3731:HG2_PB_pbsv_3694:HG3_PB_HySA_5760:HG3_PB_pbsv_3621:HG4_PB_HySA_5571:HG2_PB_PB10Xdip_19986:HG2_Ill_breakscan11_3371:HG4_PB_SVrefine2Falcon1Dovetail_2246:HG4_PB_SVrefine2PBcRDovetail_1910:HG4_Ill_svaba_4800:HG4_Ill_manta_902:HG4_Ill_SVrefine2DISCOVARDovetail_2854:HG4_Ill_Krunchall_5481:HG4_Ill_GATKHC_6253:HG4_Ill_GATKHCSBGrefine_2596:HG4_Ill_Cortex_2477:HG4_Ill_250bpfermikitraw_5244:HG4_Ill_150bpfermikitraw_4988:HG3_PB_SVrefine2PBcRDovetail_1718:HG3_PB_SVrefine2Falcon1Dovetail_2303:HG3_Ill_svaba_4772:HG3_Ill_manta_837:HG3_Ill_Spiral_4064:HG3_Ill_Krunchall_5191:HG3_Ill_GATKHC_6211:HG3_Ill_GATKHCSBGrefine_2506:HG3_Ill_Cortex_2492:HG3_Ill_250bpfermikitraw_5030:HG3_Ill_150bpfermikitraw_4871:HG2_PB_SVrefine2PBcRplusDovetail_7638:HG2_PB_SVrefine2PB10Xhap12_2711:HG2_PB_SVrefine2Falcon2Bionano_1727:HG2_PB_SVrefine2Falcon1plusDovetail_8234:HG2_Ill_svaba_4696:HG2_Ill_manta_1046:HG2_Ill_SpiralSDKrefine_11491:HG2_Ill_Krunchall_5263:HG2_Ill_GATKHC_6154:HG2_Ill_GATKHCSBGrefine_2492:HG2_Ill_Cortex_5832:HG2_Ill_250bpfermikitraw_5173:HG2_Ill_150bpfermikitraw_4796;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2756:HG4_PB_SVrefine2PBcRDovetail_1910:HG4_Ill_svaba_4800:HG4_Ill_manta_902:HG4_Ill_SVrefine2DISCOVARDovetail_2854:HG4_Ill_Krunchall_5481:HG4_Ill_GATKHC_6253:HG4_Ill_GATKHCSBGrefine_2596:HG4_Ill_Cortex_2477:HG4_Ill_250bpfermikitraw_5244:HG4_Ill_150bpfermikitraw_4988:HG3_PB_SVrefine2PBcRDovetail_1718:HG3_PB_SVrefine2Falcon1Dovetail_2303:HG3_Ill_svaba_4772:HG3_Ill_manta_837:HG3_Ill_Spiral_4064:HG3_Ill_Krunchall_5191:HG3_Ill_GATKHC_6211:HG3_Ill_GATKHCSBGrefine_2506:HG3_Ill_Cortex_2492:HG3_Ill_250bpfermikitraw_5030:HG3_Ill_150bpfermikitraw_4871:HG2_PB_SVrefine2PBcRplusDovetail_7638:HG2_PB_SVrefine2PB10Xhap12_2711:HG2_PB_SVrefine2Falcon2Bionano_1727:HG2_PB_SVrefine2Falcon1plusDovetail_8234:HG2_Ill_svaba_4696:HG2_Ill_manta_1046:HG2_Ill_SpiralSDKrefine_11491:HG2_Ill_Krunchall_5263:HG2_Ill_GATKHC_6154:HG2_Ill_GATKHCSBGrefine_2492:HG2_Ill_Cortex_5832:HG2_Ill_250bpfermikitraw_5173:HG2_Ill_150bpfermikitraw_4796;NumExactMatchSVs=35;ClusterMaxShiftDist=0.101449;ClusterMaxSizeDiff=0.0857143;ClusterMaxEditDist=0.214286;PBcalls=14;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=67;DistBack=36361;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=3:144430065-144430073;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3804.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:5:59:1/1:1:14:4:43:./.:0:0:0:0:0/1:18:38:./.:.:.:.:.:.
chr3	144755141	HG2_Ill_150bpfermikitraw_4799	A	ATATATAGCCTACATCTATATATATATAGCCTATATATATATATATATATATATATAGGATATATATATATATATATATAGGC	20	PASS	ClusterIDs=HG4_PB_HySA_5572:HG4_Ill_GATKHCSBGrefine_2601:HG4_Ill_GATKHC_6255:HG4_Ill_150bpfermikitraw_4989:HG2_Ill_manta_1048:HG2_Ill_150bpfermikitraw_4799:HG2_PB_HySA_7058;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4799:HG2_Ill_manta_1048:HG4_Ill_150bpfermikitraw_4989:HG4_Ill_GATKHC_6255;NumExactMatchSVs=4;ClusterMaxShiftDist=0.251656;ClusterMaxSizeDiff=0.251656;ClusterMaxEditDist=0.251656;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=82;DistBack=-4;DistForward=-1;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=3:144755082-144755147;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3805.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:30:0|1:33:1:1:26:./.:0:0:0:0:0/1:27:6:./.:.:.:.:.:.
chr3	144790781	HG4_Ill_GATKHCSBGrefine_2602	G	GTAATTTGAAGTAGTGGTGCAATCCACAAATGATGAGCTCATAAACTCAGGTTCATTTGCCTATGAGGGGATAATATATGAAAAATCAATAGAAGATGAAGATTTATCAGGTGGATTTCTTTATATGGTAAAATGAGTAAGGAGTAGGGATGATTGATTTTTCTTTTACTTTTCCCTTCTTGCACTACATATTTCTTAAACACTCACAGGGCATTGGAAATAGAATGCATTTTAAATAAGGTGTATTTGATGTTCATGCTTTCAGCTATTAATTTTCAATATTTAACACTTACCCATGGAAATATTCTTCCCAGATAAATGGAGAAAGAAACAAAATCCGTCTAGAGTATATAAGACACTTATATTCTTCATTTCACTTTGTGTTTTCATGCCGCTGACAAAGACATACCCGACACTGGGAGGAAAAAGAGGTTTAATTGGACTTACAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAGGCGAAAGGCACTTCTTACATGGCAGCAGAGAAAATGAGGAAGAAGCAAAAGCAGAAACCCCTGATAAACTCATCAGATCTTGTGAGACTTATTCACTATCATAAGAATAGCATAAGAAATGCCTGCCCCCATGATTCAATGACCTCCCCCGGGTCCCTCCCACAAGATGTGGGAATTTTGGGAGATACAATTCAAGTTGAGATTTGGGTGAGAATACAGCCAAAACATATCATTCTGCCCCTGGCCCCTCCATGTCCTCACATTTCAAAACTAATCATGCCTTCCCAACAGTCCCCCAAAGTTTTAATTCATTTCATCATTAACCCAAAAGTCCACAGTCCAAAGTCTCATCTGAGACAAGTCAAGTCCCTTCCACCTATGAGCCTGTAAAATCAAAGGCAAGCTAGTTACTTTCTAGATACAATGGGGGTACAAGTATTGGGTAAATATAGCTGTCCCAAATGGGATAAATTGGCCAAAACAAAGGGCTTACAGGGCCTATGCAAGTCCAAAATCCAGCAGGGCAGTCAAATTTTAAAGCTCCAAAAGGATCTCCTTTGACTCCAGGTCTCACATCCAGGTCATGTAGATGCAAGAGGTGGGTTCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8236:HG3_PB_pbsv_3625:HG2_PB_pbsv_3697:HG2_Ill_breakscan11_3372:HG4_PB_SVrefine2PBcRDovetail_1912:HG4_PB_SVrefine2Falcon1Dovetail_2249:HG4_Ill_SVrefine2DISCOVARDovetail_2857:HG4_Ill_MetaSV_3499:HG4_Ill_GATKHCSBGrefine_2602:HG3_PB_SVrefine2PBcRDovetail_1721:HG3_PB_SVrefine2Falcon1Dovetail_2306:HG3_Ill_SVrefine2DISCOVARDovetail_2846:HG3_Ill_GATKHCSBGrefine_2511:HG2_Ill_MetaSV_3347:HG2_Ill_GATKHCSBGrefine_2496:HG2_10X_SVrefine210Xhap12_2757;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2757:HG2_Ill_GATKHCSBGrefine_2496:HG2_Ill_MetaSV_3347:HG3_Ill_GATKHCSBGrefine_2511:HG3_Ill_SVrefine2DISCOVARDovetail_2846:HG3_PB_SVrefine2Falcon1Dovetail_2306:HG3_PB_SVrefine2PBcRDovetail_1721:HG4_Ill_GATKHCSBGrefine_2602:HG4_Ill_MetaSV_3499:HG4_Ill_SVrefine2DISCOVARDovetail_2857:HG4_PB_SVrefine2Falcon1Dovetail_2249:HG4_PB_SVrefine2PBcRDovetail_1912;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0674656;ClusterMaxSizeDiff=0.0648025;ClusterMaxEditDist=0.172232;PBcalls=7;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1094;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:144790782-144790782;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3806.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:65:./.:26:9:0:27:./.:0:0:0:0:0/1:39:12:0/1:49:79:.:.:.
chr3	145266478	HG4_Ill_GATKHCSBGrefine_2607	G	GACAAGAGAAATCTGATTGAAAAAAAGAAAAAAAGGAAAACTAAGAACTTTACATTTTAACCCAATCCTTCCCACATTTTGACTTTTTATTGTCTCAATT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2759:HG3_PB_pbsv_3632:HG4_PB_pbsv_3740:HG4_PB_assemblyticsfalcon_17900:HG2_PB_assemblyticsfalcon_18302:HG2_PB_PB10Xdip_19991:HG3_PB_SVrefine2Falcon1Dovetail_2310:HG2_PB_pbsv_3703:HG4_PB_SVrefine2Falcon1Dovetail_2254:HG4_Ill_svaba_4813:HG4_Ill_manta_905:HG4_Ill_Krunchall_5493:HG4_Ill_GATKHCSBGrefine_2607:HG4_Ill_Cortex_2483:HG4_Ill_250bpfermikitraw_5255:HG4_Ill_150bpfermikitraw_4998:HG3_PB_SVrefine2PBcRDovetail_1724:HG3_Ill_svaba_4787:HG3_Ill_manta_840:HG3_Ill_Spiral_4077:HG3_Ill_SVrefine2DISCOVARDovetail_2848:HG3_Ill_Krunchall_5203:HG3_Ill_GATKHCSBGrefine_2516:HG3_Ill_Cortex_2499:HG3_Ill_250bpfermikitraw_5043:HG3_Ill_150bpfermikitraw_4885:HG2_PB_SVrefine2PB10Xhap12_2717:HG2_PB_SVrefine2Falcon1plusDovetail_8239:HG2_Ill_svaba_4711:HG2_Ill_manta_1051:HG2_Ill_SpiralSDKrefine_11498:HG2_Ill_Krunchall_5277:HG2_Ill_GATKHCSBGrefine_2503:HG2_Ill_Cortex_5844:HG2_Ill_250bpfermikitraw_5188:HG2_Ill_150bpfermikitraw_4810;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2759:HG4_PB_SVrefine2Falcon1Dovetail_2254:HG4_Ill_svaba_4813:HG4_Ill_manta_905:HG4_Ill_Krunchall_5493:HG4_Ill_GATKHCSBGrefine_2607:HG4_Ill_Cortex_2483:HG4_Ill_250bpfermikitraw_5255:HG4_Ill_150bpfermikitraw_4998:HG3_PB_SVrefine2PBcRDovetail_1724:HG3_Ill_svaba_4787:HG3_Ill_manta_840:HG3_Ill_Spiral_4077:HG3_Ill_SVrefine2DISCOVARDovetail_2848:HG3_Ill_Krunchall_5203:HG3_Ill_GATKHCSBGrefine_2516:HG3_Ill_Cortex_2499:HG3_Ill_250bpfermikitraw_5043:HG3_Ill_150bpfermikitraw_4885:HG2_PB_SVrefine2PB10Xhap12_2717:HG2_PB_SVrefine2Falcon1plusDovetail_8239:HG2_Ill_svaba_4711:HG2_Ill_manta_1051:HG2_Ill_SpiralSDKrefine_11498:HG2_Ill_Krunchall_5277:HG2_Ill_GATKHCSBGrefine_2503:HG2_Ill_Cortex_5844:HG2_Ill_250bpfermikitraw_5188:HG2_Ill_150bpfermikitraw_4810;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0788177;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.258373;PBcalls=11;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=99;DistBack=29;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:145266479-145266480;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:29:0|1:20:3:2:23:./.:0:0:0:0:0/1:25:12:./.:.:.:.:.:.
chr3	149142375	HG2_Ill_MetaSV_3357	T	TAAGATAATTTTGCTGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGAGCGGTGGCGGGCTCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCCAGACGCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3373:HG3_PB_pbsv_3651:HG2_PB_pbsv_3720:HG2_PB_assemblyticsfalcon_18331:HG2_PB_SVrefine2PB10Xhap12_2735:HG3_Ill_MetaSV_3532:HG3_Ill_GATKHCSBGrefine_2530:HG2_Ill_MetaSV_3357:HG2_Ill_GATKHCSBGrefine_2517:HG3_PB_SVrefine2Falcon1Dovetail_2327:HG3_PB_HySA_5807:HG2_PB_SVrefine2Falcon1plusDovetail_8253:HG2_PB_PB10Xdip_20015;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2517:HG2_Ill_MetaSV_3357:HG3_Ill_GATKHCSBGrefine_2530:HG3_Ill_MetaSV_3532;NumExactMatchSVs=4;ClusterMaxShiftDist=0.247078;ClusterMaxSizeDiff=0.24374;ClusterMaxEditDist=0.260434;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=43962;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:149142376-149142389;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3808.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:38:0|1:27:0:0:32:./.:0:0:0:0:0/1:25:13:0/1:6:41:.:.:.
chr3	149424209	HG2_PB_pbsv_3721	G	GGGATTCTCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGACTTGGGAGGGGCCGAGGTGGCTGGATCACGAGGTCAGGAGATCGCAGCCATCCCTGGCATAAAACGGTGAAACCCGTTCTACTTTAAAAATACAAAAATTAGCCGGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTAGGCAGGAGAATGGCGTGAAACCGGAGCGGAGCTCGCAGTGAGCCGAGATCCCGCACTGCACTCCAGCCTGGGCCGGACCAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8254:HG2_PB_pbsv_3721:HG4_PB_pbsv_3757:HG2_PB_assemblyticsfalcon_18335;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_3721;NumExactMatchSVs=1;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.211161;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=329;DistBack=4;DistForward=58119;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:149424210-149424209;PctSeqSimilarity=0.9567;PctSizeSimilarity=0.997;PctRecOverlap=0.9848;SizeDiff=1;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=97;MatchId=3809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:17:0|1:36:3:1:11:./.:0:0:0:0:0/1:29:11:0/1:11:11:.:.:.
chr3	149593684	HG4_Ill_SVrefine2DISCOVARDovetail_2881	A	AAAATATAATTGTTTGGAAATGTTAGTTTTTGGTGAGCATTTGAGATTAAAAAACATTGTTGGCACTTTAGAAATAAATTAAGGCTGTATTAAATCTTTTAATTAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1744:HG4_PB_assemblyticsfalcon_17940:HG2_PB_pbsv_3723:HG2_Ill_breakscan11_3374:HG4_PB_pbsv_3759:HG3_PB_pbsv_3654:HG4_Ill_svaba_4849:HG3_Ill_svaba_4825:HG3_Ill_manta_846:HG3_Ill_SVrefine2DISCOVARDovetail_2870:HG2_Ill_svaba_4737:HG3_PB_SVrefine2PBcRDovetail_1737:HG4_PB_SVrefine2Falcon1Dovetail_2267:HG4_Ill_manta_911:HG4_Ill_SVrefine2DISCOVARDovetail_2881:HG4_Ill_MetaSV_3506:HG4_Ill_GATKHCSBGrefine_2623:HG3_PB_SVrefine2Falcon1Dovetail_2328:HG3_Ill_Spiral_4116:HG3_Ill_MetaSV_3534:HG3_Ill_GATKHCSBGrefine_2532:HG2_Ill_manta_1056:HG2_Ill_SpiralSDKrefine_11523:HG2_Ill_SVrefine2DISCOVARplusDovetail_8909:HG2_Ill_MetaSV_3359:HG2_Ill_GATKHCSBGrefine_2519:HG2_10X_SVrefine210Xhap12_2774:HG2_PB_HySA_7108:HG2_PB_assemblyticsPBcR_17735:HG2_PB_SVrefine2PBcRplusDovetail_7655;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2774:HG2_Ill_GATKHCSBGrefine_2519:HG2_Ill_MetaSV_3359:HG2_Ill_SVrefine2DISCOVARplusDovetail_8909:HG2_Ill_SpiralSDKrefine_11523:HG2_Ill_manta_1056:HG3_Ill_GATKHCSBGrefine_2532:HG3_Ill_MetaSV_3534:HG3_Ill_Spiral_4116:HG3_PB_SVrefine2Falcon1Dovetail_2328:HG4_Ill_GATKHCSBGrefine_2623:HG4_Ill_MetaSV_3506:HG4_Ill_SVrefine2DISCOVARDovetail_2881:HG4_Ill_manta_911:HG4_PB_SVrefine2Falcon1Dovetail_2267;NumExactMatchSVs=15;ClusterMaxShiftDist=0.258706;ClusterMaxSizeDiff=0.258706;ClusterMaxEditDist=0.318408;PBcalls=11;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=105;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:149593685-149593687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:0|1:24:1:2:22:./.:0:0:0:0:0/1:26:31:./.:.:.:.:.:.
chr3	149853189	HG2_Ill_GATKHCSBGrefine_2520	A	ATTCCCAAAAGGCTCATAAACACATCTTAGTTGCTACATGAGGCATGTTGGATATCCAGAAAATAAAGTCTTAATTT	20	PASS	ClusterIDs=HG2_PB_HySA_7109:HG2_PB_pbsv_3724:HG4_PB_pbsv_3760:HG2_Ill_breakscan11_3375:HG3_PB_pbsv_3655:HG4_PB_assemblyticsfalcon_17942:HG4_Ill_manta_912:HG4_Ill_Krunchall_5539:HG4_Ill_GATKHC_6314:HG4_Ill_GATKHCSBGrefine_2624:HG4_Ill_250bpfermikitraw_5293:HG3_Ill_manta_847:HG3_Ill_Krunchall_5258:HG3_Ill_GATKHC_6276:HG3_Ill_GATKHCSBGrefine_2533:HG3_Ill_250bpfermikitraw_5084:HG3_Ill_150bpfermikitraw_4929:HG2_Ill_manta_1057:HG2_Ill_SpiralSDKrefine_11524:HG2_Ill_Krunchall_5324:HG2_Ill_GATKHC_6209:HG2_Ill_GATKHCSBGrefine_2520:HG2_Ill_250bpfermikitraw_5226:HG2_Ill_150bpfermikitraw_4843;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4843:HG2_Ill_250bpfermikitraw_5226:HG2_Ill_GATKHCSBGrefine_2520:HG2_Ill_GATKHC_6209:HG2_Ill_Krunchall_5324:HG2_Ill_SpiralSDKrefine_11524:HG2_Ill_manta_1057:HG3_Ill_150bpfermikitraw_4929:HG3_Ill_250bpfermikitraw_5084:HG3_Ill_GATKHCSBGrefine_2533:HG3_Ill_GATKHC_6276:HG3_Ill_Krunchall_5258:HG3_Ill_manta_847:HG4_Ill_250bpfermikitraw_5293:HG4_Ill_GATKHCSBGrefine_2624:HG4_Ill_GATKHC_6314:HG4_Ill_Krunchall_5539:HG4_Ill_manta_912:HG4_PB_assemblyticsfalcon_17942;NumExactMatchSVs=19;ClusterMaxShiftDist=0.103896;ClusterMaxSizeDiff=0.0903226;ClusterMaxEditDist=0.248447;PBcalls=5;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=76;DistBack=1;DistForward=24792;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:149853188-149853190;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3811.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:20:0|1:40:1:1:18:./.:0:0:0:0:0/1:22:27:./.:.:.:.:.:.
chr3	149962934	HG2_PB_SVrefine2Falcon2Bionano_1747	TTTTGTGCCAACATCT	CTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTG	20	PASS	ClusterIDs=HG2_PB_pbsv_3729:HG2_PB_PB10Xdip_20020:HG4_PB_HySA_5617:HG3_PB_HySA_5813:HG2_PB_HySA_7114:HG4_PB_assemblyticsfalcon_17947:HG4_PB_SVrefine2Falcon1Dovetail_2270:HG2_Ill_SVrefine2DISCOVARplusDovetail_8912:HG3_PB_SVrefine2PBcRDovetail_1738:HG2_PB_assemblyticsPBcR_17738:HG2_PB_SVrefine2PBcRplusDovetail_7658:HG2_PB_SVrefine2PB10Xhap12_2740:HG3_PB_SVrefine2Falcon1Dovetail_2332:HG2_PB_assemblyticsfalcon_18343:HG2_PB_SVrefine2Falcon2Bionano_1747:HG2_PB_SVrefine2Falcon1plusDovetail_8258:HG3_PB_pbsv_3659:HG4_PB_pbsv_3764;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8258:HG2_PB_SVrefine2Falcon2Bionano_1747:HG2_PB_assemblyticsfalcon_18343:HG3_PB_SVrefine2Falcon1Dovetail_2332;NumExactMatchSVs=4;ClusterMaxShiftDist=0.152284;ClusterMaxSizeDiff=0.132701;ClusterMaxEditDist=0.293478;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=102;DistBack=-16;DistForward=-12;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:149962950-149962933;PctSeqSimilarity=0.9383;PctSizeSimilarity=0.9118;PctRecOverlap=0.7881;SizeDiff=9;StartDistance=-4;EndDistance=11;GTMatch=0;TruScore=87;MatchId=3812.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:61:1/1:2:10:0:12:./.:0:0:0:0:1/1:0:21:./.:.:.:.:.:.
chr3	151148556	HG4_PB_pbsv_3767	C	CTTTTTTTTTTTTTTTTTTTTTTCTTTTTTAAATTATTTATTATTATTATACTTTAAGTTTTAGGGTACATTGCACATTGTGAGGTTATTTACATATGTATACATGTTGCCATGCTGTGCGCTGCACCCACTAACGTTGTCATCTAGCATAGGTATAATCTCCCAATGCATCCCTCCCCCACTCCCCGACCCCACACAGTCCCCAGGGAGTGTGATATTCCCCTTCCTGTGTCCATGTGACTCCATTGTTTCAATTCCCACCTATGAGTGAAGAATATGCGGTGTTTGGTTTTTTTTTGTTCTTGCATAGTTTAACTTGGAATGATGTTTCCAAGTTCATCCATTCCCTACAAAGGACATGAACTCATCATCTTTTTATGCTGCATAGTATTCCATGGTGTAATTTGCCGCAACATTTTCTGAACCAGTCTTATCATGTTGGAACATTTGCGTTGGTTCCAAGTCTTGGCTATAGTGAATAATGCCGCAAATAAAACATACGTGTGCATGTGTCTTATCAGCAGCATGATTTATAGTCATTTGGGTATTATTACCCAGTAATGCGGATGGCTGGTCAAATGGTATTTCTAGCTTCTAGATCCTGAGGAATCGCCACACTGACTGTCCACAATGGTGAACTAGTTTACAGGTCCCACCAACAGTGTAAAAGTGTTCCTATTTTCTCCACATTCCTCTCCAGCAACCTGTGTTTCTGACTTTTTAATGATTGCCATTCTTAACTGGTGTGAGATGATACTCATAGTGGTTTATTTGCATTTTCTCTGATGGCCAAGTGATTGGATGAGCCATTTCTTTCATGTGTTTTTGGCTGCTAAATGTTTTTTTGAGAATGTCTGTTCATGTCCTTTCGCCCCACTTTTGAGGGGTGTTGTTTTTTCTTGTTAAATTTGTTTGAGTTCATTGTAGATTCTGTGATAATTAAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCCTCCCATGTTGTTAGGTTGCCTGTTCACTCTTATTGGTAGTTTCTTTTGCCTACTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCCAATTTTGCGTTTTTGTTCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGGCCCACGCCTATGTCCTGACATGGTAATGCCTAGGTTTTCTTTCTATGGGGTTTTTTAGGGTCTAACGGTTTAAATCTAATCCATCTGAATATTTTTATAAGGTGTAAGGAAGGGGATCCAGTTTTCAGCTTTCTAACATTATGGCAGCAGGTGTCCCAGCACCATTTATTAAATAGGGGAATTCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTTGTCAAATATCAGTTAGTTTGGATATGCTGCATTATTTCTGAGGCTCTGGTTCTGTCCCATTGATCTATATCTTGTTTTGGTACCAGTACCATGCTTGTTTTGGTTTTACTGTAGCCTTGATAGTATAGTTTTGAAGTCAGGCTAGTGTGATGCCTCCAGCTTTGTTCTTTTGTGGGCTTCATTGATATTTAACTGCGAGAACCGGGGCTCTGTTTCCATATAAACTTTAAAAGTAGGTTTTTCCCAATTCTGTGAAGAAAGTCATTTGGTAGCTTGATGGGGATGTGCATTGAATCTGTAAAATTACCTTGGGGCCAGTAGCCATTTTCACGGATATTCTTTCCTACCCATGAGCATGGAATATTCTTCCATTTTGTTGTTGTCCTCTGTTTTTTCCTTGAGCCAGTTGTGTAGTAGTTCTCCTTGAAGAGGTCCTTCACATCCGTTGTAAGTTGGATTCCTAGGGTATTTTATTCTCTTTTGAAGCAATGTGTGAATGGGAGTTCACTTCATGATGTTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTGTACATATGATTGTTATCCTGAGGACTGTTGTCTGAATCGTATCCAGGCTTTAAGGAGTTTTGGGCTGCAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTTCCTCTTTTTCCTAAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCACTGGGCCGAACTCCAACACTATGTTAATTAGGAGCGGTGAGAGAGGGCATCCTGTCTTGTGCCAAAGTTTTCAAAGGAATGGCTTCCAAGTTTTTGCCCATTCAAGTATGATATCTGGCTTGGGTTTGTCATAGAAGCTCTTATTATTTTGAAATACGTCCCATCAATTACCTAATTTAATGGAGAGTTTTGAGCTTGAAGGGTTGTTGAATTTTGTTCAAAAGGCTTTTTCCTCATCTATTTGAGATAATCATGGTGGTTTTTGTCTTTGCGCTCTGTTTATATTGCTGGATTACATGTTATTATTTGCGTATATTGGAACCAGCCTTGCATCCAGGATAAATGGAATTGCCCACTTGTCATGGTGGATAAGCTTTTGATGTGCTGCTGGATTCGGATTTCCAGTATTTATTGAGGATTTTCTGCATCAATGTTCATCCAAGGATATTGGTATAAAAATGTTCTCTTTTTGGTTGTGGTTCTCTAGCCCAGGCTTTGGTATCAGAAATGCTGGCCCTGAGAAAATGAGTTTAGGAGGATTCCCTCTTTTTCTATTGATTGAAATAGTCTTTCAGAAGGAAGTACCAGTTCCTCCTTTACTCTGGTAGAGAGGAATTCGGCTGTGTGAATCCATCTGCGTCCTGGACTCTTTTTGGTTGGTTAAACTATGATATTGCCACAATTTCAGAGCCTGTTATTGTCGATTCAGAGATTCGTAAACCCCTGTTAGTCGGAGAGTTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGGAGGGTGTTTGTAGTATTCTCTGATTGGTAGTTTGTATTTCTGTGGAATCGGTGGTTGATTATCCACCTTTATCATTTTTATTGTGTCTATTTGATTCTTTCTCTCTTTTTTTTCTTTATTATTCTTGCTTAGCGGTCTATCAATTTTGTTGATCCTTGTGCAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATGTTAGTTATTTCTTGCCTTCTGCTAGCTTTTAATGTTTTGCTCTTGCTTTTCTAGTTTTCTTTTAGATTAGGTCAGTGTGGGTGATCAATTTTGGATCTTTCCTGCTTTCTCTTGTTAGGGCATTAGTGTTATAAATTTCCCTCTTACACACGCTTGAATGCGTCCCAGAGATTCTGGGTATGTTGGGGTCTTTGTTCTCGTGTGTCAGAAAACTACTAGTTGCCGCTACGTTATGTACCCAGTAGTCATCAGCGAGGCAGGTTGTTCAGTTTCCATGTGTTTGAGCGTCTTGAGTTGAGATTCTTAATCCCTGCAGTTCTAGTTTGATTTGCACTGTGGTCTGAGAGATAGTTGTGTTTTAATTTTCTTTCTGTTACATTGCTGAGAAGCTTACCCTTCCAAACTATGTGCAATTTGGAATAGGGATGGCTCAAGAAATGGTATATCTGTGATTGTGGTGGAGAGTTCTGTAGATGTCTTATTAGGTCCGGTGGTGCATGAGGCTGAGTTCAATTCCTGGTCATCCTTGTTGAACTTTCTGGTCTCACTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTGTCCCATTTATTTAAGTGTGTGGGAGTCTAAGTCTCTGTTGTAGGTCACTCAGGACTTCTGCTTTATGAATTCTGGGGTGCTCCTTGTTATTGGGGCATAAAGATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATTCCCTTTACCATTATGTAAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTGATTGCAACCCTGCCTTTTTTGTTTTCCATTGGCTGCGTTAGGAATTCTTCCTCCATCCTTTTATTGTTGAGCCTATGTGTGTCTCGTGCACGTTGAGATTGGGTTTTCCTGAATACAAGCACACTTGATGGGTCTTGACTCTTTATCCAAATCGTTGCCAGTCTGTGTCGTTTAATTAGCAGAATTTAGTCCATTTATATTTTAAAGTTAATATTGTTATGTGTGGAATTTGATCCTGTCATTATTGATGTTAGCTGGGTGATTTTGCTTCGTTAGTTGATGTCAGTCTTCCTAGTCTCGAGGGTCTTTACATTTTGGCATGATTTTGCCAGCGGCTGGTACCGGTTGGTTCCTTTTCCATGTTTAGCACTTCCTTCAGGAGCTCTTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTTGCTTGTCTATAAAGTATTTATTCTCCTTCACTTATGAAGCTTAGTTTGCTGGATATGAAATTCTGGAACCAAAGAATTGAATATTGCCCCCACTCTCTTCTTGCTTGTAGGGTTTCTGCCGAGAGGATCGCTGTTAGTTCTGATGGGCTTTCTTGCAGGTAACCCGACCTTTCTCTCTGGGCTGCCCTGAATATTTTTTTCCTTCATTTCAAATTTTGGTGGAAATCTGACCAATTATGTGTCTTGAGTTCTCTTCTGAGAGAATCTTTGTGGGTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGAAGTTCTCCTGGATAATTATCCTGCAGAGTGTTTTTCAACTTGGTTCCATTCTCCACATCCACTTTCAGGACACCAGTTTAACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCGATGCCTCAGTGTTCTTTATTCTTTTTTCGGCTAACTCCCTTCTCGCTTCATTTCATTCTTTCATCTCCATGATACCCTTTCTTCGCAGTGATCGGCATCGGGCTCCTGAGGCTTCTGCATTCTTCACGAGTTCTCGAGCCTTTGTTTTCAGGCTCCATCATCTCCTTTAAGCACTTCTCCTGTATTGGTTTTCTAGTTATACATTCTTTCTAAATTTTTTCAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTTCCTCCCGTAGTCTCAGAGTAATTTGATCGTCTGAAGGCCTCTGTCTCTCAGCTCTGTCAAAATCATTTCTCCATCCAGCTTTGGTTTCCGTTGCTGGTGAGAAAACTGCGTTCCTTTGGAGGAGGAGAGCGCTCTGCGTTTTAGAGTTTCCAGTTTTCTGGTCTGTTTTTTCCCCATCTTGTGGTTTTATATGCGCGTGTGGTGATGTGTACAGAGGGTTTTTCGGTTTGTATGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGAACAGGACCCTCAGCTGCAGGTCTGGGAATACCCTGCCGTTCTGTGAGGTCGTCAGTGTGCCCGTGCTGGGGGGGTGGCCTCCCAGTTTAGGCTGCTCTGGGGTCATGTCAGGACCACTTGAGGAGGCGTTCTGCCCGTTTCTCATATCTCCAGCTGCGTGCGTGGGAACCACTGCTCTCTTTCAAAGCTGTCAGACAGGGACATTAAGTCTGCAAGTAGCGCCTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGGCCTACAGAGGCAGGGCAGGCCTCCTTGAGCGGGTGGCCTCCCACCCGTTTCGGAGGCTTCCCGGCTGCTGTGTTTACCTAAGCAGCTGTGCAATGGCAAGCGCCCCTCCCCCAGCCTCGTTGCGCCTTGCAGTTTTGGATCTCAGGACTGCTGCTAGCAATCAGCGAGATTCCGTGGCGTAGGACCCTCATGAGCCAGGCTGTGGTGATATTAGTCTCGTGGGCGCCGTTGTTAAGCCGGATCTGAAAAGCCGCAATTATTCGGGTGGGAGTTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTTGACTCGAAAGTGAACTTCCCTGACCCCTTCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCCCTCGCGCCACGGTGCGCGCACACACTGGCCTGCGCCACTGTCTGGCTACTCCCTATAGATGGACCCGACCTCAGATGAAATGGAGAAATCACCGGTCTTCTGCGTCCGCTCACGCTGGGAGCTGTGACTGGAAGCTTTTCTCCTATTCGGCCATCTTGGCTCCTCAATCCCCTAAGAATCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2335:HG4_PB_pbsv_3767:HG2_PB_assemblyticsPBcR_17746:HG2_PB_pbsv_3732:HG4_PB_assemblyticsfalcon_17955:HG3_PB_pbsv_3663:HG2_PB_SVrefine2Falcon1plusDovetail_8259:HG2_PB_PB10Xdip_20025:HG3_PB_HySA_5820:HG2_PB_SVrefine2Falcon2Bionano_1750:HG2_PB_SVrefine2PBcRplusDovetail_7660:HG3_PB_SVrefine2PBcRDovetail_1740:HG2_PB_SVrefine2PB10Xhap12_2743:HG4_PB_SVrefine2PBcRDovetail_1926:HG4_PB_SVrefine2Falcon1Dovetail_2272:HG4_PB_HySA_5622:HG2_Ill_breakscan11_3376;NumClusterSVs=17;ExactMatchIDs=HG4_PB_pbsv_3767;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0574823;ClusterMaxSizeDiff=0.0574823;ClusterMaxEditDist=0.222878;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=6129;DistBack=1;DistForward=48629;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:151148557-151148556;PctSeqSimilarity=0.9429;PctSizeSimilarity=0.9918;PctRecOverlap=0.9918;SizeDiff=50;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=97;MatchId=3813.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:99:1/1:0:8:0:15:./.:0:0:0:0:./.:3:27:./.:5:69:.:6111:.
chr3	151275815	HG3_Ill_Spiral_4124	A	ATTATATATATATATTATATATATTATATATATATAATATATATAATATATATATAATATATATATTATATATATAATATATATATTATATATATATATAATATATATATATAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8915:HG3_PB_HySA_5822:HG3_Ill_manta_849:HG3_Ill_Spiral_4124:HG3_Ill_GATKHCSBGrefine_2538:HG2_PB_pbsv_3733:HG2_PB_SVrefine2Falcon2Bionano_1751:HG3_PB_SVrefine2Falcon1Dovetail_2336:HG3_PB_assemblyticsfalcon_18247:HG3_Ill_MetaSV_3536;NumClusterSVs=10;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_2538:HG3_Ill_Spiral_4124:HG3_Ill_manta_849;NumExactMatchSVs=3;ClusterMaxShiftDist=0.235294;ClusterMaxSizeDiff=0.235294;ClusterMaxEditDist=0.245098;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=113;DistBack=-1;DistForward=49884;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=3:151275778-151275817;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3814.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:40:1|0:0:34:19:3:./.:0:0:0:0:0/1:16:33:./.:.:.:.:.:.
chr3	151538485	HG2_PB_SVrefine2Falcon1plusDovetail_8261	CG	TTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTA	20	PASS	ClusterIDs=HG4_PB_pbsv_3771:HG3_PB_SVrefine2PBcRDovetail_1742:HG3_PB_SVrefine2Falcon1Dovetail_2338:HG4_PB_SVrefine2Falcon1Dovetail_2275:HG2_PB_SVrefine2Falcon1plusDovetail_8261:HG4_PB_SVrefine2PBcRDovetail_1928:HG3_Ill_MetaSV_3537:HG2_Ill_MetaSV_3361:HG4_Ill_MetaSV_3509:HG4_PB_HySA_5624:HG3_PB_HySA_5824:HG2_PB_HySA_7122:HG2_PB_pbsv_3735;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8261:HG3_PB_SVrefine2PBcRDovetail_1742;NumExactMatchSVs=2;ClusterMaxShiftDist=0.109005;ClusterMaxSizeDiff=0.109005;ClusterMaxEditDist=0.291169;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=172;DistBack=-80;DistForward=-2;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:151538487-151538484;PctSeqSimilarity=0.9917;PctSizeSimilarity=1;PctRecOverlap=0.954;SizeDiff=0;StartDistance=7;EndDistance=8;GTMatch=0;TruScore=98;MatchId=3815.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:57:0|1:37:0:3:54:./.:0:0:0:0:0/1:17:2:./.:.:.:.:.:.
chr3	152053958	HG2_Ill_GATKHCSBGrefine_2526	C	CAAAAATGTAATCTGGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3377:HG2_PB_pbsv_3736:HG4_PB_assemblyticsfalcon_17959:HG4_PB_HySA_5626:HG4_Ill_MetaSV_3510:HG4_Ill_GATKHCSBGrefine_2632:HG2_Ill_MetaSV_3362:HG2_Ill_GATKHCSBGrefine_2526:HG4_PB_SVrefine2Falcon1Dovetail_2276:HG4_PB_pbsv_3772;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2526:HG2_Ill_MetaSV_3362:HG4_Ill_GATKHCSBGrefine_2632:HG4_Ill_MetaSV_3510;NumExactMatchSVs=4;ClusterMaxShiftDist=0.146237;ClusterMaxSizeDiff=0.146237;ClusterMaxEditDist=0.189247;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=235;DistBack=49684;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:152053959-152053972;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9958;PctRecOverlap=0.9916;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3816.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:27:0|1:36:2:1:18:./.:0:0:0:0:0/1:26:9:./.:.:.:.:.:.
chr3	152611311	HG2_PB_SVrefine2PBcRplusDovetail_7664	G	GTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGGGCACCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATGGCATGAACCCCGGAGGTGGAGCTTGCAGTGAGCTGAGATCATGCCACTGCACTCCAGCCTGGACAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAAAAGAAATACTTGAGACTGGGTAATTTGTAAAGAAAAGAAGTTTAATTGGCTCATGTTTCCACAGGCCATACAAGCACGGCACCAGCATTTATTTTCTGTTAGGCCATTCTTGCATTAGTATAAAGAAATATCTGATTCTGGGTGATTTACAAAGAAAAGAGGTTTAATTGGCTCACAGTTCTGCAGGCTGTCCAAGCATGGCACCAGCATCTGCTTGGCTTCTGGGGAGACTTCAGAGAGCTTTTGCTCATGGCAGAAGGTGAAGTAGGACCAGGTATGTTACATGGCAAGAGCAGGAACAAGGGGAGGGGGAAGTGCCACACACTTTCAAACAACCAGACCTCACGAGAATTCACTATCACAAAGACAGCACCAAGTCCTGAGGGATCTGCCATCATGACCCAAACACCTCTCATCAGGCCCACCTTCAACACTGGGAATTACATTTCAACATGGGATTTGTGTGTGACAAATATCCAAACCATATCAGTAGGCAAATAAAAAAATCACCATCTAGGGTTTTGTTTGCAAATCAAAGAGGGAAGTGGAGGATTACTACTGACAGTACCAATAGACACTAGAGTTCTCAGTGAGGCCATGGAGAGTGAGCATCCAAAGTCCTGGCCTTGAAGGTCATACAAATCTGAGCAAAGTCAAACCACTCACCCTCTAATGGCACATCAGGCTTGGGCTGGACATTGAATATCTCACAGGCAAATATGATGAACTGAAGTCTACAGGTTCGTCCTCAGATTTCTTCTATGGATATCAGCCTTCTTAGATCCTTATCCAAACCTAAAGTGGGTAGAGTAAGAATAGTCTCCTGATAATTGATACTAGGTTTCTCATTCCTCAAGAAGAACTCAAAGTCAGATTTAGCATGATTTTTAAAAATAATAATATTAAAGGAAGAGAAAAAATTTTGGAACCAGTAAGGTAAGACAAATTCACACCATGCTACACATATTGTATATAAACATGTAAAGAGAGTGTTCAGATGCTACTCAGGGCAGGAGCTCCAGACTCCCACTAGGAGTTTCAGAATTTGGGAAGAAAACTATAAAGCAGTGTTTCTCAATTCAGCTGTGGCTGCACAGTAGAATTCCCTTAAGAACCTTTATACTTTCAATGCCCAGCCATATCTCAGACTAATTAAATCAGAATCTTTGGGCATGGGACCCAGGCTTCAGTATTGTTTTATTTTTAAGGCTCTCTAGGCACTGTGCAGCCAAAACAAGATCCACTGACTTAGA	20	PASS	ClusterIDs=HG2_PB_HySA_7131:HG2_PB_pbsv_3738:HG2_PB_PB10Xdip_20034:HG2_Ill_Spiral_263:HG4_PB_assemblyticsfalcon_17965:HG4_PB_SVrefine2PBcRDovetail_1930:HG4_Ill_GATKHCSBGrefine_2634:HG3_Ill_SVrefine2DISCOVARDovetail_2888:HG3_Ill_GATKHCSBGrefine_2542:HG2_PB_assemblyticsfalcon_18360:HG2_PB_assemblyticsPBcR_17758:HG2_PB_SVrefine2PBcRplusDovetail_7664:HG2_PB_SVrefine2Falcon1plusDovetail_8264:HG2_Ill_SVrefine2DISCOVARplusDovetail_8923:HG2_Ill_GATKHCSBGrefine_2529:HG3_PB_HySA_5828:HG4_PB_HySA_5630:HG4_PB_SVrefine2Falcon1Dovetail_2279:HG3_PB_SVrefine2PBcRDovetail_1745:HG3_PB_SVrefine2Falcon1Dovetail_2342:HG4_Ill_SVrefine2DISCOVARDovetail_2896:HG2_PB_SVrefine2PBcRplusDovetail_7665:HG2_PB_SVrefine2PB10Xhap12_2748:HG2_PB_SVrefine2Falcon1plusDovetail_8265:HG2_10X_SVrefine210Xhap12_2785:HG2_PB_SVrefine2Falcon2Bionano_1756;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2529:HG2_Ill_SVrefine2DISCOVARplusDovetail_8923:HG2_PB_SVrefine2Falcon1plusDovetail_8264:HG2_PB_SVrefine2PBcRplusDovetail_7664:HG2_PB_assemblyticsPBcR_17758:HG2_PB_assemblyticsfalcon_18360:HG3_Ill_GATKHCSBGrefine_2542:HG3_Ill_SVrefine2DISCOVARDovetail_2888:HG4_Ill_GATKHCSBGrefine_2634:HG4_PB_SVrefine2PBcRDovetail_1930;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0411606;ClusterMaxSizeDiff=0.0391363;ClusterMaxEditDist=0.0836707;PBcalls=18;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=1454;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:152611312-152611311;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3817.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:116:1/1:0:33:0:36:./.:0:0:0:0:1/1:0:46:./.:15:202:.:1490:.
chr3	152773680	HG2_PB_SVrefine2Falcon1plusDovetail_8267	G	GGGAGGGGGGGGGGGGAGGTGGAGGGAGAGGGAGGGGAGGGGAGGGAGGGGAGGGGAGGGGAGGGGGGGGAGGGAGGGGAGGGGAGGGGGGGAGGGGAAGGGGAAGGAGGGGGGGAAGGGAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2282:HG2_PB_SVrefine2Falcon2Bionano_1758:HG2_PB_assemblyticsfalcon_18364:HG2_PB_SVrefine2Falcon1plusDovetail_8267:HG4_PB_SVrefine2PBcRDovetail_1933:HG3_PB_SVrefine2Falcon1Dovetail_2344:HG2_PB_PB10Xdip_20037:HG2_PB_pbsv_3741:HG2_PB_SVrefine2PBcRplusDovetail_7667:HG2_PB_SVrefine2PB10Xhap12_2752:HG3_PB_SVrefine2PBcRDovetail_1747;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8267;NumExactMatchSVs=1;ClusterMaxShiftDist=0.207407;ClusterMaxSizeDiff=0.207407;ClusterMaxEditDist=0.266667;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=121;DistBack=5;DistForward=8445;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=3:152773645-152773683;PctSeqSimilarity=0.9228;PctSizeSimilarity=0.8897;PctRecOverlap=0.7518;SizeDiff=-15;StartDistance=26;EndDistance=26;GTMatch=0;TruScore=85;MatchId=3818.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:0:26:2:12:./.:0:0:0:0:./.:5:1:./.:.:.:.:.:.
chr3	153162699	HG2_10X_SVrefine210Xhap12_2789	T	TGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCATGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAAAAAAAAAAAAAAAAAAATTAGTCAGGCAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1760:HG4_PB_pbsv_3780:HG2_PB_PB10Xdip_20038:HG2_Ill_MetaSV_3366:HG2_Ill_GATKHCSBGrefine_2537:HG4_Ill_MetaSV_3512:HG4_Ill_GATKHCSBGrefine_2642:HG3_PB_pbsv_3674:HG2_PB_HySA_7140:HG4_PB_HySA_5637:HG3_PB_HySA_5836:HG2_PB_pbsv_3743:HG2_PB_SVrefine2Falcon1plusDovetail_8268:HG4_Ill_SVrefine2DISCOVARDovetail_2900:HG4_PB_SVrefine2PBcRDovetail_1935:HG4_PB_SVrefine2Falcon1Dovetail_2283:HG3_PB_SVrefine2PBcRDovetail_1748:HG3_PB_SVrefine2Falcon1Dovetail_2345:HG3_Ill_SVrefine2DISCOVARDovetail_2891:HG2_PB_SVrefine2PBcRplusDovetail_7668:HG2_PB_SVrefine2PB10Xhap12_2753:HG2_Ill_SVrefine2DISCOVARplusDovetail_8927:HG2_10X_SVrefine210Xhap12_2789;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2789:HG2_Ill_SVrefine2DISCOVARplusDovetail_8927:HG2_PB_SVrefine2PB10Xhap12_2753:HG2_PB_SVrefine2PBcRplusDovetail_7668:HG3_Ill_SVrefine2DISCOVARDovetail_2891:HG3_PB_SVrefine2Falcon1Dovetail_2345:HG3_PB_SVrefine2PBcRDovetail_1748:HG4_PB_SVrefine2Falcon1Dovetail_2283:HG4_PB_SVrefine2PBcRDovetail_1935;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0580645;ClusterMaxSizeDiff=0.0516129;ClusterMaxEditDist=0.216561;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=151;DistBack=2987;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=123;REFWIDENED=3:153162700-153162822;PctSeqSimilarity=0.9939;PctSizeSimilarity=1;PctRecOverlap=0.9272;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=97;MatchId=3819.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:./.:0:0:0:0:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr3	153898408	HG2_PB_SVrefine2Falcon2Bionano_1762	A	CTACATTTTTAAAAAGTTGATGAGAAAGTGTTTACCTGTGATTCTGAGCAGATCTGGTGTATGGCAGGATTATGTTACACCTGCCCACCCAGACTTAATGGAAATACAGTATAGAATGAGGCTTGCTGTCCTTGAACTGCATGAACTAGAAAATGAAGAAAGCCTGCTGGCATTATTTAAAAGACTTGTGAATTCTATGAATTCATATAGGAGGAAAAGGCATTTTATTGCACTTTAAATGACAATTAATGTTAATGAGCGTGTACCATGTGCCAGATCATGTTCTAAGCACTTAACATGTTTTAGCTCATTTAGTCAGCATGAGAACCTAATGAGATCATACCATTAGATTCCCATTTTGCAAATAAGGAAATAAAGGCATGATATGGGGACATAAAATTGCCTAAGGGTATATGGCTAATAAAAGAGGGAGCTGGGGTTTGAATCCAGGTGGTTTGGCTCCAGAGCTTGCATTTGTAACCAGTACCCTGCTAACATTTCCCAAAGAGGTGATGTGCATGGTACATGATTAGCCTTGCTAGTGCTACAGTATGTACAGTGTGGCAATCTGTGAAATGGACTTTGTCTGGAAGTGTATTCACTTACAGATATTATAGAGTTTACTCATGAGGTAACAGATCCCATCTCACCAATATCGAAGGAAAATGAAAACATAAAGATTGGGAAAAAGAGGGTGGAAAGTCTGGTCTTTGGTGTCGAGGAGGTGATTTGGAAACCTAATAAGCACACTTTCCCTCTTTTCATTGTTTTATTCTATCTTTGATTTACAAGACCTTTTCTTCCTGGCATGCTTCCTTTTTCTCTTGGTTGCCAGTGGTCTTTCTTGGGCTGATTATTGTCTGTAGCAGGACTGAAGGTTGGCCCTGTGTTCTCCACTCGTTTGTTTTGTTTCAATAGATGAATAAATGGAAATTTATCATTTCCAAATCTACTTAAAATCAGGGCAAGGACTTATTTACCCCATACTTCTTATTCTTCTGATGCTTTGCTAATCCATGCTAATAATATTTAAAAAGAAAGTATTTTAAAGCCTTTGATTAAAGTTGAAGGGGAGGGTTTTGTGAAAGGGGTAAACTGGAATCAGCTGCTTCATATGAGCTGGAGCAGGATTGGAAAATATCAGAAAGGAAGTGAAATCCTATTTCCCTCACATAGACAAGCATCATTTTCCTTAGGATATTATGGCTTAGGAAATTGACCTCTAGAGTTTTTCAAAATTCTGTGCCCTGGTTCCATTTTTTTGTGTGTTTGTTTTGTTTTAATGAAACTGATGGAAGCCACAGAAAGCATTTCTTTTTTTTTTTTTGGAAGACAGCTTTCGGGGGGCATATTTAATAAAGCCTGAGATACAAGGATTTGGGGCTCACTTTAAATGTTATTTTTACCATTGGCTGAATTTGGATTTGAATTATCATGGGTGCTCCCTGAAAAAGAATTGGAAATAGTGCCCAAAGAGAAATGCGTTCTTTCCTGTACTGATTTTTATCCCAGAATGACCAGTCCACAATAGGAAAGGGGGCTTTGGCATGCAAAAGCTTTTTTGTTTTACTTGACTTCATTCCAGTATTCTGTAAATTCATTCTTGGTGCAGTTTCCAAGCAGCAACTAAGAATCCACATTCTCCCAGTTTGTTTATAATTTATTATTTATACCCCAACTGCATCCATAAAAGGCTCAAGGAAACTTACAATAAAATACATGTACTCAATGAGACTGTTTAAGTGGGAAACAAAACAAGGCAAACAAGGCAGGGTTGAAGAGAGCAAGCATGCCTAGCCACTTCTGTAAGAGGTACTATGAGTGAGGATTAAACAGCACTTCCCTTCTGAGCAGCCAAAATGGAAAGGTCACATAATTGGTTTTATAGCAATCGTATCCTAAAAGCAAATGTTCCTTAGAAGTTAGAAACCTTTCCTAGGGTTGAGTTTTCAAGAATTTTTGCCAGGCAATGGATTAGCAAAACTGTTCTTGAAGATACAAGCCTGGCATGGAGGCTGCTGTGTAAGGAGTATAAACTTCCACACGTTATATTTGCCAACCTGATTCTGACAGCTGGGAAAGCCGGCCTCTCAGCAGAGCTCACCCCCATCAGAAGTGATAATTAATGTGGTTATTAAATCATGCCTGGTAGACACTTGCTTTGTATTTTTTCTCATTCTTCTTGGAAGAATGCACTTTAATAGTGGGGCAAGGAAGAATAATAGGTACCTAGTATTGATTCATTCAGCACATCTGTTGAGTGTTTACTCTTTGTTAGGCACTGGAGATCCCGGGGTGAACAGGCATACTTGTCTGTGTCTTCATGATCATATATAAAATTAGGGGTCAGTTTTCATTAGATGGAAATTAATAGTTATATCCACATTTTAAAAACGTAATTATAAATTGAAAAGCTCTCTGTAATAACCCAGAGCATCTCAGGCCCAAGCATTCACAGACCGTTTTCTCTTCTAAGGATGTTATGATAAGAGTGCTGGCATATGTTTTCTGTCATTCATTATCCCTATTTCTGAGGAGTGTTATCCTCATTTCTGGGACAAATTAAAATATGGGTGAATGCATTTGAGTAGCACTGAAACAAAAGAATCAAGCGTGCAGGTTACCATGGAAACAAGTTCCTTTTTCTCCACTTTGTTTCTGTGAGGCAAGTTCAGATGATAAATACTTTAAATGGTCATTTTTAGGCAAAAACTCAGTCTTAATAGTATTAGAATTTCAAGGTCTTTTTTATACTGTTTTCCTATATTTGTATGGTCTTGTATATATTCCTTCTAGCAAATACATTATCAATAAGAGGAAGGGCTAAGTAAGTTGGAGCCTTAACTGATACGGAAGAGTTGAGGGACACTTGGTTTTGTAGTCTCTCTTTGCCTCTCCCTCCCCTGGCCCCCAGTACCCCTCTCCTTTTTTGGGATTTGCCAGGTGCCTTGAACTGAAGGTGTCTGTGCAGAGCTGGATTTAAATCTAAGCAGGCTCTGTGTTGTGTGGTATTAAGGCTAAGAAAACCCTTTGATTCAAAGACCAGAAAATACCCTTAGCTTATATACCCTTAGAAAATACCTCAGTCTCTGCCATATATCCAGGCTGATCTCAAAGGTTTAACAGGATGATAAGAATTGTTTAACAAAAATTATCCTAGAGATTTTAAGGACC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_2893:HG4_PB_pbsv_3785:HG2_PB_pbsv_3748:HG3_PB_pbsv_3679:HG2_Ill_Spiral_265:HG4_Ill_Spiral_313:HG2_10X_SVrefine210Xhap12_2792:HG4_Ill_SVrefine2DISCOVARDovetail_2902:HG2_PB_SVrefine2Falcon2Bionano_1762:HG2_PB_SVrefine2PBcRplusDovetail_7670:HG2_PB_SVrefine2Falcon1plusDovetail_8271:HG3_PB_SVrefine2PBcRDovetail_1750:HG2_PB_SVrefine2PB10Xhap12_2755:HG3_PB_SVrefine2Falcon1Dovetail_2349:HG4_PB_SVrefine2Falcon1Dovetail_2285:HG2_Ill_breakscan11_3378:HG2_PB_PB10Xdip_20040:HG2_PB_SVrefine2PBcRplusDovetail_7669:HG4_PB_SVrefine2PBcRDovetail_1937:HG2_PB_SVrefine2Falcon1plusDovetail_8270:HG2_Ill_SVrefine2DISCOVARplusDovetail_8931;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1762:HG4_Ill_SVrefine2DISCOVARDovetail_2902;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0421771;ClusterMaxSizeDiff=0.041867;ClusterMaxEditDist=0.148755;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=3173;DistBack=44339;DistForward=58671;DistMin=44339;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:153898409-153898407;PctSeqSimilarity=0.9994;PctSizeSimilarity=0.9997;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3820.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:154:1/1:0:36:1:42:./.:0:0:0:0:1/1:0:40:1/1:5:294:.:3217:.
chr3	155025177	HG3_Ill_svaba_4856	A	ATCATATATACGTATGTATATATAATACATGTGTATATATACATATATATACACATATAT	20	PASS	ClusterIDs=HG2_PB_pbsv_3750:HG4_Ill_svaba_4882:HG4_PB_HySA_5648:HG4_Ill_scalpel_3631:HG4_Ill_Krunchall_5583:HG3_Ill_svaba_4856:HG2_Ill_svaba_4772:HG2_Ill_scalpel_3709:HG2_Ill_Krunchall_5364:HG2_PB_HySA_7152;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_Krunchall_5364:HG2_Ill_scalpel_3709:HG2_Ill_svaba_4772:HG3_Ill_svaba_4856:HG4_Ill_Krunchall_5583:HG4_Ill_scalpel_3631:HG4_Ill_svaba_4882;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0661157;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.214876;PBcalls=3;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=17;DistForward=2035;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:155025176-155025178;PctSeqSimilarity=0.9856;PctSizeSimilarity=0.9833;PctRecOverlap=0.8361;SizeDiff=-1;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=93;MatchId=3821.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:20:./.:2:3:11:2:./.:0:0:0:0:0/1:20:32:./.:.:.:.:3606:.
chr3	155027215	HG2_10X_SVrefine210Xhap12_2795	TTGT	CAAGCAAGATCTCTGAATCCAAATAGAGCTAGGATACCTGCCAAGTTATGGCTGATTCCAAGGCCTATGCTGTTCCCAAACTGCATCACTAGAACCATGGAAGAAAACAAAATATGAATTATATACCATGTATAGAAAATAGATACAGCACACAGTACCACAAATAGGCAATGCTTTAGCATGTTTGAGATGCATAGTGAGAAATGTAGATATGTTATTTCACATTTCATAAAAGCACAAGGCTTTTGTAGGTTTCAAATACAGAGAATATACCAGGAAAATCATCATTCTGCTCTTAACATTCTTTCAGATTTCCAGGTATTTCTCTAAGAGCTTTCTTTCAATATTTCACTCTCACCATCAGGAAATTATTCTTCATATTTAACCTATTACTTCATGCTGAGGTTTAGCCATCTCTTTGGGATTCTTTAGAGATAGAGAACAGCTGGTCCCTATTTTCTACATAATAATCCCTCATAAACTTGAAGCCTTCCATAGTAATTTTGTCTCTGGGATACATAATCTTAATTCCTAAGTCCTATCTTTTTTTTCAAATATTTTCTTTAAATGTGGTTATTTTTATGCCTGGAGAGAAAGATCATATTTATATTGCCCACATCCTTTTTAAATTGTATTGAGTGTTAAGGGGCTATTGCAGAGTGAGATGGTAAAAGTTGCAGTATGACTGATGTATGGTGCCTATGAGTCTGTTCATGTCTCCCAAGGCCTTTTCACCTAGGTAGTAAGGCTCTGGGCATTTGCTGTCCATATCTCACACTCAGGGTGCTGAGGAAAATCAAAACTGCCCATGTCCAAGAAAATTATGAGAAAAGCATGTAAATAGAGAAATTCGAGGGGTGAGCAGTGTTTTTGTATGAAGTGCATGTATCCTTACTAAAAAAATTTTTTTAACTTATTAGTTAGCATACAAAAGAAATAAAATGAATACCTAGGATCTATAATAGCAGAGTATGTGTTTTTATAAAGACAGGAAAAGAAAGATAGGTCATCAAAAGCTTTTCGCATTTCAGAACTCTAGAATGATTTCTGAGTGATGGGCATTTCTAGAGATCATGATAATGGCAGAAATCTAATAAGATAATAATGGAAGAACAAAAAGAGGTGTTTATAGGGACTGAGTTACTGTACGAATGAATCACAATTATGAAAGTGAGTTATAAAAAGGATAAAACCATCAATGCTAAGGGAATTACTTGAAAGAATAAATTAATTCTGTATTGCATCACAAACAAATATTAATAAGAGATAACAATAATCAAGAGCTTTACTAGATGCCAGGTGTTGTTTTAGGCACATAACATACATTAACTAATCTAATTCTCACAACATCCTACCACATAAGGTTCTTAACCCAATTTTACAGATAAGAAAACTGAGACAAAAGAGGTTAAATTATCGGACAAAAGTCACAATGGAGGTACAAGAAAGATTTGGAATTCTAACACAGGTAGTCTGGCCCAAGGGTCTTTGGTCTCTCGATGTCAGAAGATGATTTTAGCAAGGACTGAGCTATTGAATCTACCAATTCATCAAAACTAACCATTCTCAAAGGTTCAGATAAATGGATTTTAATTTCAATGTTCTCTTGTACTATAGTCATAGGTATGATTAAGAGAGACCATGCCCATAGGTGAATTTTTTTTCACTGTTTAAGGAATTTTTATTAAAGCTAGAATTTTGTAATCCAAGTTACATTTCCTTGCTTAGTTATCAATTCTGTTACTTAGAACTGACATTTTGAGCTATTCCACAGTAAAGAATTACAAAGCATTCCTCTAGTGCTTTAAATTTTTGTACTTGCTGAAAATTCTTTTTCCCAGGGTCTATAAAACATTAAATTTTTTTTAATATTTTACTATTTTTTGTGGGGTTTTTGTTTTTAAATCAGTAAGTAATTTAGGACTAGCATTATGTTTGCTAGACCTGGCATTTTCTCTGTACATAAGGTTCAAAGTTTCCTCTTCTTTTTTTATTTATTTTATATTTTGCAATTTTTTTTCCATAATATTTAAGTTTTTCGATGTTAAGATATTTTTCTTTGGTGAAGCCCAAGTTTCTTTTCGTGGTCTCTGATCAATTTTAAACAGTTGGAACACCAGTGGCGCTGTTAACTGCTTTCTGGGAAGCCTCTTTAACTTGATGGACTTGTAGTATAGCTACAGCTTCATCAACTTTATAACGGAGTAACTCTGGAGACTCGGGCATATGAAGAACTTCTGAATTATCAATCTCCAACAATATGCCAGTGATTTTACTAGCAAGAGTAGGGTGCAAGGCTTGAATAAAAGGAAACAGCCATTCACCCGACATTTGCTTTTCCTCTTGAGGAGGGGCAGATGCCAACATGGAAGCAGTCAAAGGTTCCTGACCTTGTACATGAACAGCAGGCTGTTGCATTGTAACTTGTGGCTGTGCATTAAGATGTTGCTGAGGATTGCGAAGTCCTGCAGCATATTTATACTGTGGAACGGTGCAGATAGCAGGAGTAGCTGCAGCAGCTGCAGCTGCAGGACATGGACCCATTGTCTGTGTTGATGTGTTAGCAACACACTGTGTTGACATGACTTGTGGAACCTGTGAAGAAGCTGGTCTCATAGTACTAAATGGTGGTCTAGGAGCAGCTGGGCGGGTAGCACCGGGCATATTTTGGAATGGATGAGGTCTGGCACCCTGAGCAGTCCAGCGAGGACTTGGTCTTAGCTGAGCAATTTGGCTAGGAGGAGGGTATGCAGCACAGTTCTGAGACTGTGAGATAGCTGCCATTAAGAAACCTGAAGGAGGTGCTAGCTGGTAGGGGTTGATTACAGGGTTGGGCACAGCTCGTACACTTGCCATTCTCTGCATATACTGGTTAGTGAGGTGAGCCTGGCACTCTCCTTTGCGCTGAGCTAAAGCTAAATACAATGGCTTTGTGGCCACAATTCTACCATTCATTTCTGTAACTGCTTTAGTGGCTTATTCTGGGGAGGAGAAACATACAAAACCAAACCCTTGCTGCGACCACCCTCCAACCTTTGCACTAGTGATTATACCAAATGGAGAAAACATCTCCGGAGACGTTCATCATCAATACCATCATCAAGATTTTTCACATAAAGATTAACACCCTAGTACCTGGTAATCCCATCTTGCTTCATCTGTTCAAATTTGCACTTATGTTCCACCTTTTTCTGAGCTCGACCAACATAAATTTGTTTTCCATTGAGCTCCATTTCCATTAATCTCATCCACAGCTTTCTGTGCATCCTCATGCCTTTCAAAGCTTACAAATCCAAATCCTTCGGATTTTCCACCTTCATCAGTCATTACTTTCACACTTACGGCAGGGCCAAACTTGCCAAAGAGATCCTTAAAGTGCTCATCATCCATGTCTTCTCCAAAATTCTTGACGTAAACATTGGTGAACTCTTTTGCCCTAGCTCCAAGTTCAGTTTCCCGTTTTTTACGAGACTTAAATCGTCCAACAAATACTTTGCGACCATTTAGGAGCATTCCATTCATTTTTCTCAATACCTCTTTCAGCTGCTTCCTGCATCTCAAAGCGTACAAATCCATAGCCCTTGGAACCATTTTCATCACCAACCACTTTACATGA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_1939:HG3_PB_pbsv_3681:HG4_PB_pbsv_3789:HG4_PB_SVrefine2Falcon1Dovetail_2287:HG2_PB_SVrefine2Falcon2Bionano_1764:HG3_PB_SVrefine2Falcon1Dovetail_2351:HG4_Ill_SVrefine2DISCOVARDovetail_2906:HG3_Ill_SVrefine2DISCOVARDovetail_2902:HG2_Ill_SVrefine2DISCOVARplusDovetail_8938:HG2_10X_SVrefine210Xhap12_2795:HG2_PB_SVrefine2PBcRplusDovetail_7672:HG2_PB_SVrefine2PB10Xhap12_2757:HG2_PB_PB10Xdip_20042:HG3_PB_SVrefine2PBcRDovetail_1752:HG2_PB_assemblyticsfalcon_18374:HG2_PB_SVrefine2Falcon1plusDovetail_8273;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2795:HG2_Ill_SVrefine2DISCOVARplusDovetail_8938:HG3_Ill_SVrefine2DISCOVARDovetail_2902:HG4_Ill_SVrefine2DISCOVARDovetail_2906;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0463918;ClusterMaxSizeDiff=0.0458492;ClusterMaxEditDist=0.135371;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=3612;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:155027219-155027214;PctSeqSimilarity=0.9993;PctSizeSimilarity=1;PctRecOverlap=0.9992;SizeDiff=0;StartDistance=0;EndDistance=3;GTMatch=0;TruScore=99;MatchId=3822.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:121:1/1:0:33:0:27:./.:0:0:0:0:1/1:0:33:1/1:1:458:.:3606:.
chr3	155040660	HG4_Ill_MetaSV_3514	T	TGAAAAGCAAATTCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3379:HG2_PB_pbsv_3752:HG3_PB_pbsv_3682:HG4_PB_pbsv_3790:HG4_PB_HySA_5649:HG2_PB_HySA_7153:HG4_PB_SVrefine2PBcRDovetail_1940:HG2_PB_SVrefine2Falcon2Bionano_1765:HG4_PB_SVrefine2Falcon1Dovetail_2288:HG4_Ill_manta_917:HG4_Ill_MetaSV_3514:HG4_Ill_GATKHCSBGrefine_2648:HG3_PB_SVrefine2PBcRDovetail_1753:HG3_PB_SVrefine2Falcon1Dovetail_2352:HG3_Ill_manta_854:HG3_Ill_SVrefine2DISCOVARDovetail_2903:HG3_Ill_MetaSV_3542:HG3_Ill_GATKHCSBGrefine_2549:HG3_Ill_250bpfermikitraw_5113:HG2_Ill_manta_1064:HG2_Ill_MetaSV_3369:HG2_Ill_GATKHCSBGrefine_2542:HG3_PB_HySA_5845;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2542:HG2_Ill_MetaSV_3369:HG2_Ill_manta_1064:HG3_Ill_250bpfermikitraw_5113:HG3_Ill_GATKHCSBGrefine_2549:HG3_Ill_MetaSV_3542:HG3_Ill_SVrefine2DISCOVARDovetail_2903:HG3_Ill_manta_854:HG3_PB_SVrefine2Falcon1Dovetail_2352:HG3_PB_SVrefine2PBcRDovetail_1753:HG4_Ill_GATKHCSBGrefine_2648:HG4_Ill_MetaSV_3514:HG4_Ill_manta_917:HG4_PB_SVrefine2Falcon1Dovetail_2288;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0979827;ClusterMaxSizeDiff=0.0979827;ClusterMaxEditDist=0.175439;PBcalls=11;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=173;DistBack=25;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:155040661-155040675;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3823.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:39:./.:18:26:11:9:./.:0:0:0:0:0/1:33:10:./.:.:.:.:.:.
chr3	156239873	HG4_PB_SVrefine2Falcon1Dovetail_2293	T	TACAAGATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_7159:HG2_PB_pbsv_3755:HG3_PB_HySA_5854:HG3_PB_pbsv_3686:HG2_PB_assemblyticsfalcon_18382:HG4_PB_pbsv_3795:HG3_Ill_manta_855:HG3_PB_SVrefine2PBcRDovetail_1755:HG2_PB_SVrefine2Falcon2Bionano_1768:HG4_PB_SVrefine2PBcRDovetail_1944:HG4_PB_SVrefine2Falcon1Dovetail_2293:HG4_Ill_MetaSV_3518:HG4_Ill_GATKHCSBGrefine_2651:HG3_PB_SVrefine2Falcon1Dovetail_2356:HG3_Ill_MetaSV_3543:HG3_Ill_GATKHCSBGrefine_2553:HG2_PB_SVrefine2PBcRplusDovetail_7675:HG2_PB_SVrefine2PB10Xhap12_2763:HG2_PB_SVrefine2Falcon1plusDovetail_8276:HG2_Ill_GATKHCSBGrefine_2547:HG2_10X_SVrefine210Xhap12_2800:HG2_PB_PB10Xdip_20048:HG2_Ill_MetaSV_3372:HG4_PB_HySA_5657;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2800:HG2_Ill_GATKHCSBGrefine_2547:HG2_PB_SVrefine2Falcon1plusDovetail_8276:HG2_PB_SVrefine2PB10Xhap12_2763:HG2_PB_SVrefine2PBcRplusDovetail_7675:HG3_Ill_GATKHCSBGrefine_2553:HG3_Ill_MetaSV_3543:HG3_PB_SVrefine2Falcon1Dovetail_2356:HG4_Ill_GATKHCSBGrefine_2651:HG4_Ill_MetaSV_3518:HG4_PB_SVrefine2Falcon1Dovetail_2293:HG4_PB_SVrefine2PBcRDovetail_1944;NumExactMatchSVs=12;ClusterMaxShiftDist=0.108108;ClusterMaxSizeDiff=0.108108;ClusterMaxEditDist=0.232919;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=309;DistBack=126517;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=3:156239874-156239882;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3824.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:79:./.:0:4:0:7:./.:0:0:0:0:1/1:0:19:1/1:2:75:.:.:.
chr3	156917568	HG2_PB_SVrefine2Falcon2Bionano_1770	A	AGAGGCTTTCCTATATAGGAAAGTTGGAGGCTTTCCTATATAGGAAAGTTG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_5275:HG2_PB_pbsv_3758:HG4_PB_SVrefine2PBcRDovetail_1947:HG2_PB_PB10Xdip_20049:HG4_Ill_SVrefine2DISCOVARDovetail_2916:HG2_PB_SVrefine2PB10Xhap12_2765:HG2_PB_SVrefine2Falcon2Bionano_1770:HG2_PB_HySA_7163:HG2_Ill_SVrefine2DISCOVARplusDovetail_8944;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5275:HG4_PB_SVrefine2PBcRDovetail_1947:HG4_Ill_SVrefine2DISCOVARDovetail_2916:HG2_PB_SVrefine2PB10Xhap12_2765:HG2_PB_SVrefine2Falcon2Bionano_1770:HG2_PB_HySA_7163:HG2_Ill_SVrefine2DISCOVARplusDovetail_8944;NumExactMatchSVs=7;ClusterMaxShiftDist=0.116505;ClusterMaxSizeDiff=0.0582524;ClusterMaxEditDist=0.213592;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=139;REFWIDENED=3:156917569-156917707;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3825.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:30:0|1:18:3:0:26:./.:0:0:0:0:0/1:32:23:./.:.:.:.:.:.
chr3	157241464	HG4_Ill_Krunchall_5602	A	ATATATTATACATAATCTAGATTATGTATAATACATAATCTAGATTATGTATAATATACATAATCTATATTATG	20	PASS	ClusterIDs=HG3_PB_pbsv_3689:HG2_Ill_breakscan11_3380:HG2_PB_pbsv_3759:HG4_Ill_manta_920:HG3_Ill_manta_857:HG2_Ill_manta_1066:HG2_Ill_SpiralSDKrefine_11561:HG4_Ill_GATKHCSBGrefine_2655:HG3_Ill_GATKHC_6328:HG3_Ill_GATKHCSBGrefine_2557:HG2_Ill_GATKHC_6259:HG2_Ill_GATKHCSBGrefine_2550:HG2_PB_assemblyticsfalcon_18390:HG4_PB_pbsv_3800:HG4_Ill_GATKHCSBGrefine_2654:HG3_PB_SVrefine2PBcRDovetail_1758:HG3_Ill_Spiral_4149:HG3_Ill_SVrefine2DISCOVARDovetail_2914:HG3_Ill_Krunchall_5296:HG3_Ill_GATKHC_6327:HG3_Ill_GATKHCSBGrefine_2556:HG4_Ill_svaba_4898:HG4_Ill_Krunchall_5602:HG4_Ill_250bpfermikitraw_5352:HG4_Ill_150bpfermikitraw_5094:HG3_Ill_svaba_4868:HG3_Ill_250bpfermikitraw_5128:HG3_Ill_150bpfermikitraw_4971:HG2_Ill_svaba_4781:HG2_Ill_Krunchall_5376:HG2_Ill_250bpfermikitraw_5277:HG2_Ill_150bpfermikitraw_4893:HG3_PB_HySA_5859;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4893:HG2_Ill_250bpfermikitraw_5277:HG2_Ill_Krunchall_5376:HG2_Ill_svaba_4781:HG3_Ill_150bpfermikitraw_4971:HG3_Ill_250bpfermikitraw_5128:HG3_Ill_svaba_4868:HG4_Ill_150bpfermikitraw_5094:HG4_Ill_250bpfermikitraw_5352:HG4_Ill_Krunchall_5602:HG4_Ill_svaba_4898;NumExactMatchSVs=11;ClusterMaxShiftDist=0.107383;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.328947;PBcalls=6;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=14;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=-1;DistForward=12;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=3:157241465-157241502;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3826.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:55:1/1:4:28:2:15:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr3	158947489	HG4_PB_SVrefine2Falcon1Dovetail_2300	T	TCCTCCTCCTCCTCCACCCACCCTCCCCTCTCCTCCCCAACTACCCTGTCCTCCTCCCCCACCCCCTCCCCCTCCTCCCTCCCCCTCCTCCCCCACCTCCATCCTCTCCCCCTCTCCCATCCTCCTCCACCTCTCCTCCTCCCCCCCTCCCGTCCTCCTCCACCCCCCTCCTCCTCCCCTCCCCACCTCCTCCTCCTCCCCCTCCTCGTCCTCCTCCTCCCCTCCTCCTCTCCCCCCTCCTCTCCCCCCCTCCTCCCCTCCTCCTCCTCCTGCTCTCCCCTCCTCCTCCCCATTCTGCTCTCCTCCTCCCCTCCTCCTCCCCCCTCCCCCCTCCCCCCTCCCCCCTCCTCCCCCTCCCCCCCCCTCCTCCTCCCCCTCCCCCTCCTCCCCCTCCTCCTCCCTCCCCCTCCTCCTCCCCCTCCCCCTCCTCCCCCTCCTCCTCCCCCCTCCCCCCTCCTCCCTGTCTTCCTCCCCACCTCCCCCCTCCCCCTCCTCCCTGTCTTCCTCCCCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2771:HG2_PB_pbsv_3763:HG2_PB_SVrefine2Falcon1plusDovetail_8282:HG3_PB_SVrefine2PBcRDovetail_1760:HG4_PB_SVrefine2Falcon1Dovetail_2300:HG3_PB_pbsv_3693:HG2_PB_SVrefine2Falcon2Bionano_1774:HG2_PB_SVrefine2PBcRplusDovetail_7680;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_2300;NumExactMatchSVs=1;ClusterMaxShiftDist=0.095057;ClusterMaxSizeDiff=0.095057;ClusterMaxEditDist=0.183556;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=511;DistBack=-152;DistForward=-1;DistMin=-152;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=152;REFWIDENED=3:158947490-158947641;PctSeqSimilarity=0.9507;PctSizeSimilarity=0.9376;PctRecOverlap=0.9376;SizeDiff=-34;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=94;MatchId=3827.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:./.:0:0:0:0:./.:0:0:0:0:./.:0:6:0/1:3:10:.:.:.
chr3	159681266	HG3_PB_SVrefine2PBcRDovetail_1761	G	GTAGCTAGGACTGTGCCTGGCTAATTTTTTATTTTTTGTAGAGACAGAGTCTCACTATGTTGCCCAGGCTGGCATAGTGAGACTCTGTCTCCACAAAAAATAAAAAAT	20	PASS	ClusterIDs=HG3_PB_HySA_5878:HG2_PB_assemblyticsfalcon_18406:HG2_PB_pbsv_3768:HG3_PB_pbsv_3697:HG3_PB_assemblyticsfalcon_18313:HG2_Ill_breakscan11_3381:HG2_PB_PB10Xdip_20059:HG4_PB_pbsv_3811:HG4_PB_SVrefine2Falcon1Dovetail_2303:HG4_PB_SVrefine2PBcRDovetail_1956:HG4_Ill_manta_924:HG4_Ill_SVrefine2DISCOVARDovetail_2929:HG4_Ill_MetaSV_3523:HG4_Ill_GATKHCSBGrefine_2663:HG3_PB_SVrefine2PBcRDovetail_1761:HG3_PB_SVrefine2Falcon1Dovetail_2363:HG3_Ill_manta_860:HG3_Ill_Spiral_4162:HG3_Ill_SVrefine2DISCOVARDovetail_2926:HG3_Ill_MetaSV_3546:HG3_Ill_GATKHCSBGrefine_2565:HG2_PB_SVrefine2PBcRplusDovetail_7684:HG2_PB_SVrefine2PB10Xhap12_2777:HG2_PB_SVrefine2Falcon2Bionano_1779:HG2_PB_SVrefine2Falcon1plusDovetail_8286:HG2_Ill_manta_1070:HG2_Ill_SVrefine2DISCOVARplusDovetail_8958:HG2_Ill_MetaSV_3378:HG2_Ill_GATKHC_6280:HG2_Ill_GATKHCSBGrefine_2559:HG2_10X_SVrefine210Xhap12_2812:HG4_PB_HySA_5687;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2812:HG2_Ill_GATKHCSBGrefine_2559:HG2_Ill_GATKHC_6280:HG2_Ill_MetaSV_3378:HG2_Ill_SVrefine2DISCOVARplusDovetail_8958:HG2_Ill_manta_1070:HG2_PB_SVrefine2Falcon1plusDovetail_8286:HG2_PB_SVrefine2Falcon2Bionano_1779:HG2_PB_SVrefine2PB10Xhap12_2777:HG2_PB_SVrefine2PBcRplusDovetail_7684:HG3_Ill_GATKHCSBGrefine_2565:HG3_Ill_MetaSV_3546:HG3_Ill_SVrefine2DISCOVARDovetail_2926:HG3_Ill_Spiral_4162:HG3_Ill_manta_860:HG3_PB_SVrefine2Falcon1Dovetail_2363:HG3_PB_SVrefine2PBcRDovetail_1761:HG4_Ill_GATKHCSBGrefine_2663:HG4_Ill_MetaSV_3523:HG4_Ill_SVrefine2DISCOVARDovetail_2929:HG4_Ill_manta_924:HG4_PB_SVrefine2PBcRDovetail_1956;NumExactMatchSVs=22;ClusterMaxShiftDist=0.203704;ClusterMaxSizeDiff=0.203704;ClusterMaxEditDist=0.277778;PBcalls=16;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=107;DistBack=85282;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=3:159681267-159681274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3829.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:42:1/1:2:23:1:14:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr3	162750533	HG4_Ill_GATKHCSBGrefine_2674	G	GTATTGGTAATATTCGATCAAATTATGGGGAATATTCTGGTGAAATGGGGAATATTCTGGCTTTCAATA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2826:HG3_PB_pbsv_3711:HG4_PB_pbsv_3819:HG2_PB_HySA_7215:HG2_PB_pbsv_3787:HG3_PB_HySA_5914:HG4_Ill_svaba_4938:HG4_Ill_manta_929:HG4_Ill_Krunchall_5650:HG4_Ill_GATKHC_6427:HG4_Ill_GATKHCSBGrefine_2674:HG4_Ill_Cortex_2504:HG4_Ill_250bpfermikitraw_5396:HG4_Ill_150bpfermikitraw_5137:HG3_Ill_svaba_4915:HG3_Ill_manta_864:HG3_Ill_Spiral_4188:HG3_Ill_Krunchall_5348:HG3_Ill_GATKHC_6383:HG3_Ill_GATKHCSBGrefine_2579:HG3_Ill_Cortex_2517:HG3_Ill_250bpfermikitraw_5173:HG3_Ill_150bpfermikitraw_5013:HG2_Ill_svaba_4825:HG2_Ill_manta_1078:HG2_Ill_Krunchall_5429:HG2_Ill_GATKHC_6315:HG2_Ill_GATKHCSBGrefine_2575:HG2_Ill_Cortex_5892:HG2_Ill_250bpfermikitraw_5324:HG3_PB_assemblyticsfalcon_18337:HG4_PB_HySA_5719:HG2_PB_PB10Xdip_20140:HG2_PB_assemblyticsfalcon_18436:HG4_PB_SVrefine2Falcon1Dovetail_2309:HG4_Ill_SVrefine2DISCOVARDovetail_2942:HG2_PB_SVrefine2PBcRplusDovetail_7692:HG2_PB_SVrefine2PB10Xhap12_2790:HG2_PB_SVrefine2Falcon2Bionano_1790:HG2_PB_SVrefine2Falcon1plusDovetail_8295;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5324:HG2_Ill_Cortex_5892:HG2_Ill_GATKHCSBGrefine_2575:HG2_Ill_GATKHC_6315:HG2_Ill_Krunchall_5429:HG2_Ill_manta_1078:HG2_Ill_svaba_4825:HG3_Ill_150bpfermikitraw_5013:HG3_Ill_250bpfermikitraw_5173:HG3_Ill_Cortex_2517:HG3_Ill_GATKHCSBGrefine_2579:HG3_Ill_GATKHC_6383:HG3_Ill_Krunchall_5348:HG3_Ill_Spiral_4188:HG3_Ill_manta_864:HG3_Ill_svaba_4915:HG4_Ill_150bpfermikitraw_5137:HG4_Ill_250bpfermikitraw_5396:HG4_Ill_Cortex_2504:HG4_Ill_GATKHCSBGrefine_2674:HG4_Ill_GATKHC_6427:HG4_Ill_Krunchall_5650:HG4_Ill_manta_929:HG4_Ill_svaba_4938;NumExactMatchSVs=24;ClusterMaxShiftDist=0.253731;ClusterMaxSizeDiff=0.253731;ClusterMaxEditDist=0.300752;PBcalls=14;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=68;DistBack=-4;DistForward=9604;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=3:162750530-162750537;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3831.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:54:1/1:4:29:2:24:./.:0:0:0:0:1/1:0:52:./.:.:.:10586:.:.
chr3	163104167	HG2_PB_SVrefine2PB10Xhap12_2792	T	TATGAACCAAGACCATAAGTTTCCAGAGTCAGTTCCCCAGATAATCACACAAATTTGTTCTTAGAGTGAAGAGTTCATAATATTAGAACATTTACTTACTGTATGATATGGTAACATCTAACATGAATATAAAGTTTCAGAGTTAACGTTAAAACATTTTAAATTTATATTCAGCTGTATTCCCAGAGAAAACTAATAGTAACATTTATTTTAGCCTTCTTATTAGTAATGCTAACACTGGCTGAGCATGTATATTAAAGCCACTTGCCAGGAAACTTTACATATACTATCTTACCACATTTAACATACATGCTTACCTTATTATTACAGACTCCTTGGGATGTTGCTTTGCCAGCCTGAATCCTCTGTGACCAGTGGCATCTTTGCCCAAGTTTTCTAGGGCCCGCTGAGCTGATTTTGTCCACTCAGCCTGGCAGGGTACACTCAGCGCACATTACTGGCCTGGATCCCACACAGGCCAAGGATGAGCCAGGTGCAGAGTGGCGAGGGACATGTGAGTGGACATGGGGTCCAGCCACGGGCTCATCAAGGTACACTGGCTGCAATGAGGCAGGTAGCTCCAGGTGCTGGCCTGGGCACTGGCTCCCTGTGCAGCTGTGACTGTGAGAGGTGACAGCGTGCTGGCAGTCCTCACAGCCCTCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAGGAGAACTTCAGCCCACCGCTGCACTGTGGGAGCCCCTTTCTGGGCTGGCCAAGGCCGGAGCCGGCTCCCTCAGCTTGCAGGGAGGTGTGGAGGGAGAGGCGGGAGCGGGAACCGAGGCCACGCCCCGCGCTTGCCGGCCAGCTGGAGTTCGGGTGGGCTTGGGCTTGGCGGGCCGCGCACTCGGAGCAGCTGGCCGGCCCTGCCGGCCCCGGGCAATGAGGGGCTTAGCACCCAGGCCAGCGGCTGCGGAGGGTGTACTGGGTCCCCCCAGCAGTGCCAGCCCATCGGCGCTGCGCTCGATTTCTCGCCAGGCCTTAGCTGCCTTCCCGTGAGGCAGGGCTCAGGACTTGCAGCCTGCCATGCCTGAGCCTCCCACCCTCTCCGTGGGCTCCTGAGCGGCCGAGACTGCTGGATGAGCGCAGCCCCCTGCTCCACCGGCCCAGTCCCATCGACTACCCAAGGGCTGAGGAGTGCCGGCGCAGGGCGCGGGATTGGCAGGCAGCTTCACCTGCAGCCCCAGTGCGGAATCCACTGGGTGAAGCCAGCTGGGCTCCTGAGTCTGGTGGGGATGTGGAGAACCTTTACCTCTAGCTCAGGAATTGTAAAGGCACCAATCAGCGCCCTGTCAAAACAGACCACTGGGCTCTACCAATCAGCAGGATGTGGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCCCAGCCAGCAGTGGCAACACCCGTGGGTCCCGGTCCCCTTCTACACTGTGGAAGCTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTGCTGCTCACTCTTTGGGTCTGCACTGCCTTTATGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTCACTCCTGAGCTGGCAAGACCAGGAACCCCACCAGAAGGAAGAAACTCCGAACACATCCAAACATCAGAAGGAACAAACTCCGGACATGCCACCTTTAAGAACTGTAACACTCACTGCGAGGGTCCACAGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCCGGACACAACTGGACCAGGCGTACTGCAAGCAGCTTCCACTGTTGACATCGAGGAATACAGTGGCACCTGGAATCTCAGAGATGCCAGGAACTGCAGAGGCACAAAGAAGGTGTCACAGCCCTAGCCTGGGGAGCTCCTAGGTCTGGGCTCCCGGCAGGGCTTAGGTCTTCTCTCCCTCTCTCTTCTATCTTTCTTGTTGCCTGCAATGTGGTGAGTAAGGGATGTGTTTTAACCCTGTTTGTGTTACAGCTCCTTTAACCCCACCATTTGGCAGGTCCCAAGTTCTTGTCCTGCATCCAGGAAGAATGAGGTATGCAGACCAGTGGAGTGTGAGCAAGGTAAAGAGGAGCTTTACTGAGTGACAAAACGGCTCAGAGGAGACCCTCACTGGGTAGCTCCTCTCTACATGCAGGGTCTCCCAATTGTTCCAGCTCTCTGCAAAGAGGAGACCTTTGAGTGGGTAGCTTCTCTCCACAGGCAGGTCATCCCGTTGGGCATTCAGCTCTCATCAGAGAGGAGACCATGGAGTGGGTAGCTCCTCTCTGCAGCTGGTCACCACATCCTCTCTTTGGTTCTCAGCAGAAAGGTGGTCCTGGGATAGATAGCTTCTCTCTGCAGCTGATTTTCTCATCATCTCCTCAAGTCTGTGTGAGTCCACGGCTTTTATGGGCCTCAGAGGGGAGGAAGTGCACACTGATTGGTCCATGGGTGGCCATGGGCAGGACTGGAAAAAGCACCACAAGTATCTACTCTCGTCTGTGGGATTGGCTGCCTGGCCCCTAGGCTTCAGGCCCTCCCTGGCTTGAAGGTGAGGCTTCACCAGAGATCTGCCCCTCCCACCCAGGAACCTGTCTGCCTCCTGCTGTCAGTTCATAGCGTCCAGGCTGTTTGTGACATGGGGTGCATGCAGACCTGTCCTGAGCTGCCTTCAACACCTCCTGGGCCTCTCTCCTGTGTTTGTCAGTACCCAAAGTCCTGAGAGGGCTGCAGCAGCAGGGGGCTGGCATGTCAGTACTGCCTCAAGTGTACATACACCTGGCTAGACTGCTACAGTGCCTGGGCTTGGCGCCAAACTTGCTTTGAGATTGGAGTGGGCACTGGGAGTGGGGAGATGTCAGGCAGTGGGAGCAGATACCTCCCAGCCTGTGGAGACAGGACCCTGAGAGTGCAGAGGTGCCTGGGTCCACAGCCACAGCTTGGTCAGCTGCAGGTGCACCCAGGAAGGTGGGGCTTCTACCTGTTCTTGGCTCCTGTTGGCCCTGTGGAGCATGCAGCCCAGTTCTTTGTACTTCCTGTATTTGGATATCTAAATCTCTAGCAAGGCCAGGGATGTTTTCCTCAATTATTCCCTCAAATGAGTTTTCCAAAATTTTACATTGTCTTCTCCCTCAGGAACATGAGTTATTTTTAGGTTTGGTCATTTTACATAATCCCATGTTTCTTGGAAACTCTGTTTATTTCTTTGTTTCTCTTTTCTTTACTTTTGTCTTTCTGGGTTAATTCAAAAGCCTTGTCTTCAATCTCTGAAAATCTTCCTTCTACTTTTTCTAGTTTATTGTTAAAAATTTCTACTGCACTTTTGAATTCCCTAAGTGTGTCATTCATTTCCAGAAGTTTGATTATTTTTTCTTTAAAATATCTCTTTAGAAAATGTTTATTTATTTCCTATTTTTTTAAAATTTATTTATGTTGATTTTCACCTTTCTTTGGTATATCCTTGAGTATCCTAATAACCTTATGAATTTTTTGTATGGTATTTTAAAAAATTTATCACTCTTTGGATTCATTTCTGAAGAGCTAGTGTGATTTTTTGCTGTGGGGGGTGTTACAGAACTCTGTTTTGTCCTATTACTAGAATTATGTTTCTGGTCCTTCTCATTTGGGTAGACTATTTCTCCTAATTATTCTTGAGTTTATTTTTAATTTGGATTTTTTTAAATCTATGTTTTCCCTTTAGAATGTGACTTTAATGTATATATTTTACTGTAGCCTATTTTGGCTCTTAATTGTTTCAGGGGTGAAGACTCTGTTTGAGTTCCTTGGTTATGGACAGACTGTATTAGTCAGAGTTCTCTAGAAGGACAGAACTAATAGGATAGATGTATATATGAAAGGGATTTTATTAAGGATTATTGACTCACAATCACAAGGTGAAGTCCCACAATAGGCCATCTGCAAGCTGAGGGGCAGAAAGTCAGTGGGAATCCCAAAAACTCAAAAGTAGGGAAGCAGAGAATGCTATATAGTTTTTATTATAGACATCATTCAATTCTTTCATTACGTTAACTTCAAGGTATTTTATTATATTCATAGTACTGTATATGGAATTAGTATTTTGATTACATTTTCAGCCTCTTTGCTATTGGTATATTAAACTGTTAATGTTGGTTGCATGCTAGATTTTGTATCTTGCAAAATTACTACATTTGTTTATTGGTTCTAGTAGTTTTTAGTGTTTAGGTTTTTTCTTTGGTTTTTTTATTATAATGTTTAGGGTACATGTGCACAACGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCTTCATTTAACATGAGGTATATCTCCTAATGCTATCCCTCCCCCCTCCCCCCACCCCACAACAGGCCCCGGTGTGTGATGTTCCCCTTCTTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGGTTTTTTGTCCTTGCGATAGTTTCCTGAGAATGATGGTTTCTAGCTTCATCTATGTCCCTAATAGAAGATCATACTATCCACATACACATACAAAAATAATGATTTGATTTATTTCTTTCCAATCTGGATGCCCTTTATTTCTTTTTTTTCTGATTACTCCATTTAGGACTTTCAATGCTATGTTGAATTATAGTCATGAAACTGGACATTCTTGTTGTGTTCCATACCTTAAAGGAAAGGCTGGAGTTTTTTTTTTTACTCAATTAGTGTGATACTAGCTGTTGGTCTGTCACATATGGTTTTTATTGTGTAGAGGTATTTTCCTTCTATACTCAAGCTTTTGAGGGTTCGTATCAAGAAGAGATGTTGAATTTTACCAAATGCTTTTTTAGCCTCAATTGAAATTATCATGTGGATTTTGTCCCTCATTTTCTTTACATAATGTGTCACATTTATTGATTTGCATATGTTTAAACATCCTGCATCCCTGGGGAAAAATCCCAATTTGTCATAATGAATGACTTTTTTAATGTGTTGGTGATTTGGTTTGCTATTATTTTTTGAGAATTTTTACATCAATGTTCATAAAAAATATTGGCCTGTAGTTTTCATTTTCGATGTGTCTTCATCTAGTTTTGGAATCAGCATAATATTGGATTCATACAATATAGTTTTTTATTTAAAATGTTTCTACTTATTTGATGTAGGTGATTTTGATTGTAAACTTTCTCATTAGTACAGCTTTTGCTGTATCTCATAGGTTTTCATGTGTGGTGTTTCCATTATCATTTGTTTCAGGAAGTTTTTAAATCTCCTTTTCAATTTACTTATTAATTCACTGGTCATTCAGGAGCATGTGGTTCAATTTCTATGTATTTGTATAGTTTCTAAAATTTCTCTTGTTATTGATTTCTAGTTTTATTTCACTGTTTTCAGAGAAGCTACTTGATATAATTTCAGTGATTTTTAATTTTTCAAGATTTGTTTTGTGGATAACATATGGTATATAATGTAGCCTTGAGAATGATCCATGTGCTGAGAAGAAGAATGTGTATGCTGCAGCTTTTGGATAAAATGTTCTGTAAATATCCATTATGTTCATTTGGTCTGGAGTATAGATTAAATCTATAGTTTCTTTTTGGATTTTCTGTGTCCGTAATCTCACCAAAGTTGAAAGTGAAGTGCTGAAGTCTCCAGCTATTATTGTATTGGGGTCTCTCTCTTTGTCTTTGTTAATATTTGCTTTTTAAATCAGGTATTCTAATGTTGGGTGCATATATATTTGCAATTTTTTATCCTGTTCAATGGATGTGTTTATCATTATATAATGACCTTCTTCGTATCTTTCTGAAATTTCTGTCTTGAAATCTATTTAATCTAAGTATGGCCATTGCTACTTTTTTAAAAAAATCCATTTGCATGTAATATTTTTTTCCATCCGTTTATTTTCAGTTTGTGTTTGTCTTTATAGGTGAATTGTGTTTCTTGTAGGCAACAGATTTTTGGATTTTTTAAAAACCTTCATTCACTCTATTTGTTTTCACTGAGGATTTAGTTGATTAACATTTATTGTTATTGTTAAAAAGTATGGACTTACACGTCATTTTGCAGTTTTCTTTTATTGTTTTGTGGTCTTGTGTTCCTCCTTTTCTTTCTTTCTTTCTGTGTTCCTTTTAGTAAAGGAAAGGTGATTTTCTCTTTTCCTGCTTTTTGATTTTATGTATCTGTCGTATGTTTTTGATTTGAGGTTACCATGTGGCTTTCAAATAAAATATAGTAACCCATTATTTTAAGCTGATGACTATTTAGCACTGATTGGATAAACAAACAAGCAAAGAGAAAATTGATACATTATTTATACTTTAACTTTTCCACCCCAATTTTTAACTTTTTGTTGTCTGTACTTATATCTTACTATAGGGTCCATGTCTTGAAAAGTTGTTGTAGTTATTACTTTGATAGGCTAATTTATTAGTCTTTTTACTCACGATATGGGTAGTTTATGGACCACAATTACGGTGTTATACTATTCTGTGTTTTTCTTTGTTCTTACTATTATCAGAGAGTTGTGTACCTTCAGATGACTTTCTACTGTTCATTGATGTCCTTTTCTTTCAGACTGAAGAATTTTCTTTAGCATTTCTTGTAGGTCAAGTCCTCTGGTGAAAACATCTTTCAGCTTTTGCTAGTCTGGGAAAGTCTTTACTACTCTTTCTTGTTTGAAGGATATTTTTGCTGGATGTACTATTCTAGGATGAAAGTTATTTTCTCCTTCTGTACTTTAAATATGTCATGCCATTCTCTCCTGGCCTCTAAGGCTTCCACTGAGAATTCTACTACCAGATACATTGGATCTCCATTACATGTCATTTCTTTCTTTTCTCCTGCTGCCTTTAGGATTATGTCTTCATCCTTGCCTTTTTGGAGTTTTATTATTAAATGTCTTGAGGTCTTGAGGGGGTTATATTGGCTTAGTGCATTCTTTAGTATGTCAATTCACTTTTCAGTTCCAGAATTTCTGCTTGATTCTTTAAATTATATTAATCTCACTGTTAAATTTATCTTTCAGGCTTCTGAATTCCTTCTCTGTATTATCTTGAATTTTTTTGAATTTCCTCAAAACAGCTATTTTTGAATTTTCTGTCTGAAAGTTCATATACCTCTGTTTCTCCATGTCCATGATTGGTCCTTCATGCTTTATTTAGGGTTTTTTTAATTTTTTTTTTTTTTATTGGTGAGAGCATGCTATTCTGGATGGTCTTGATCCTTTTGGATGTTTTTTGGTATCGAGGAATTGAAGAGTTAGGTATTCATTTTAGTCTTCACATTCTGGACTTTTTAGACCTGTCTTTCTTAGGAAGACTTTCCAGATATTCATAGGGACTTGAGGGTTGTGATCTAAGTTTTTGGTCACTGCAGTCATACCTACATTAGGGACATCCCAATCTCTGCAATGCTGTGATTCTTGCAGACTAACAGAGGTATTGCCTTGGAAGTCTTTGGTAAAATCCAGATGAATTCTCTGGATTATCAGGTAGAAGCTCTTGTTTTCTTCTTTTTTTCCCCCCTAAACAAGCAGTCACTCTCTCTATGCTGAACTGCCTAGAGCTGGGCAAGGGATGACACAAGCACCCTTATGGCAATTACCACATAGGCTGTGCTAGATCAGACCTGACACCAATACAGCAGTTGTGTTCTTCCCTTCATGGTGGCAAATTCTCCCTGGTCTTTGGTAGATCCAGAGATGTCATTTGAGAGCCAGGTTCTGAATTTGGAAATGATAGGAATCTACCTGGTGCTCTGTTCTACTGCTGCTGAGCAGGCACCCAAGCCACAAGCAGAATTGTTTTGTTTTTTTTTTTCCATTCTTATATTCCCTTTTCATTAGCAGAGTAGTCTCTCCCCATGGCCACCACCAACCCGGGCTCATCATGAGTACTGCTTGGTACTACAAGTGTTCATTTAAAAACCAAGGGTTCTTCTTTAGCCAGGTTATCATGAATACCTCCAAGCCTGGGACTGTCCCTTCAGGCCAGTGGGATCTTCTCTGGCACAGGGCAGGTGTAGAAATGCTTGAATGGGAGCATTCAAGAACCCATGCCTTCAATGGGGGTCCCCAAGAGCCTGCTTGGTTTTCTACCCCACTTTGTCCAGGCTGCTACTTATGGTGCAGTACAAAGTCTTCTTCAATTTTCTGTTTGTATTTGTTAAATGGAAGGAATTTTTCACTGTAGCCACCACAGCTTGGAATGTGCTGGGTCATGCCTAAAGCCAGCAAGTCTTAGAGTCTCACCCAAAGCCTATAGCGAGTAATACATGAGTACCAATGCTGATTATTCAGAGCACAAAGCTGTTAGTTGGTAGGTGTTGAATCCTGCCTAGACTGACTCCTTTCCTTAAAGGCAGTGGATGGATACCCTTCTGGACCAGGGTGTGTCATTTGGGAGCTAGGTCCTGGCATGGGGGCGTCAAAATTCTGCCTATGAGCTCTATCGTACTGTGAGTGAGTTGGTATCAGAGTTGTAAGCAAAGTTATCTTTCCTCTTCCCTCTCCTGTCCTCAAAGGAAAGGAAGGATTCTCTCAGAGGTATGAGCTCTGCTGCCTGCAGATGGTGGAAGGGTGATGCAAGCATTCTTTGGCTGCCTGGACTGGTGTCTCACTAATTTGCATGCCCCCAAGCCTGCTGGCTTCAAGCCTTGCCCAGCACTAGGAATTGCCCGTGTATTTCAGTCCTTGTGGCCTGTGTATTTATTTTGTATCATGCACTTTTACTCAATTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20141:HG3_PB_assemblyticsfalcon_18341:HG2_PB_assemblyticsfalcon_18438:HG2_PB_SVrefine2PBcRplusDovetail_7694:HG2_PB_SVrefine2PB10Xhap12_2792:HG3_Ill_SVrefine2DISCOVARDovetail_2948:HG2_10X_SVrefine210Xhap12_2828:HG2_PB_SVrefine2Falcon2Bionano_1792:HG3_PB_SVrefine2Falcon1Dovetail_2372:HG4_PB_SVrefine2PBcRDovetail_1963:HG3_PB_SVrefine2PBcRDovetail_1774:HG4_PB_SVrefine2Falcon1Dovetail_2310:HG2_PB_SVrefine2Falcon1plusDovetail_8297:HG2_PB_HySA_7218;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2792:HG2_PB_SVrefine2PBcRplusDovetail_7694;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00824176;ClusterMaxSizeDiff=0.00572574;ClusterMaxEditDist=0.0831234;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=8738;DistBack=38613;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:163104168-163104170;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=0.9998;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3832.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:76:./.:17:6:5:28:./.:0:0:0:0:0/1:29:18:0/1:200:410:.:8434:.
chr3	166362304	HG2_Ill_MetaSV_3389	T	TAAAAAGGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAATTAAAATTAAAAAAATAAATAAATAAAAAATAAATAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_3795:HG3_PB_HySA_5941:HG3_PB_pbsv_3721:HG3_PB_HySA_5940:HG3_PB_assemblyticsfalcon_18365:HG2_PB_assemblyticsfalcon_18458:HG3_PB_SVrefine2Falcon1Dovetail_2379:HG2_PB_SVrefine2Falcon1plusDovetail_8305:HG3_PB_SVrefine2PBcRDovetail_1781:HG3_Ill_MetaSV_3556:HG2_Ill_manta_1083:HG2_Ill_MetaSV_3389:HG3_Ill_GATKHCSBGrefine_2593:HG3_PB_HySA_5939;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_3389:HG2_Ill_manta_1083:HG3_Ill_MetaSV_3556;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0467836;ClusterMaxEditDist=0.180775;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=342;DistBack=34479;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=3:166362305-166362314;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3833.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:53:0|1:36:2:0:43:./.:0:0:0:0:0/1:26:22:0/1:7:28:.:.:.
chr3	166390222	HG3_Ill_GATKHCSBGrefine_2594	T	TAGAATCAGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_3722:HG2_PB_HySA_7240:HG2_PB_pbsv_3796:HG3_PB_HySA_5942:HG3_PB_assemblyticsfalcon_18366:HG2_PB_SVrefine2PB10Xhap12_2800:HG3_PB_SVrefine2PBcRDovetail_1782:HG3_PB_SVrefine2Falcon1Dovetail_2380:HG3_Ill_SVrefine2DISCOVARDovetail_2965:HG3_Ill_GATKHCSBGrefine_2594:HG2_Ill_GATKHCSBGrefine_2589;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2589:HG3_Ill_GATKHCSBGrefine_2594:HG3_Ill_SVrefine2DISCOVARDovetail_2965;NumExactMatchSVs=3;ClusterMaxShiftDist=0.121113;ClusterMaxSizeDiff=0.121113;ClusterMaxEditDist=0.23493;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=27907;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=3:166390223-166390230;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3834.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:44:0|1:20:0:0:32:./.:0:0:0:0:0/1:24:15:0/1:6:26:.:.:.
chr3	169486995	HG2_PB_SVrefine2PB10Xhap12_2806	C	CCCCCACCCCCAGCCACCCCAGCCCCACCCCCCAACCTCCCCAGCCCCACCCCCCCACAACACCCCCAGCCCCGCCGCCCCCAGCCACCCCAGCCCCACCCCTCCAACCTCCGCAGTCCCACGCCCCGCCAACCTCCCCAGCCCCACCCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8309:HG3_PB_HySA_5966:HG2_PB_pbsv_3802:HG2_PB_SVrefine2Falcon2Bionano_1802:HG3_PB_SVrefine2PBcRDovetail_1787:HG2_PB_PB10Xdip_20166:HG3_PB_pbsv_3731:HG2_PB_SVrefine2PBcRplusDovetail_7702:HG2_PB_SVrefine2PB10Xhap12_2806:HG3_PB_SVrefine2Falcon1Dovetail_2387:HG4_PB_SVrefine2Falcon1Dovetail_2322;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2806:HG2_PB_SVrefine2PBcRplusDovetail_7702;NumExactMatchSVs=2;ClusterMaxShiftDist=0.127208;ClusterMaxSizeDiff=0.126761;ClusterMaxEditDist=0.241379;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=150;DistBack=8;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=59;REFWIDENED=3:169486996-169487054;PctSeqSimilarity=0.9767;PctSizeSimilarity=0.9933;PctRecOverlap=0.7086;SizeDiff=1;StartDistance=-43;EndDistance=-43;GTMatch=0;TruScore=89;MatchId=3835.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:40:1/1:3:17:0:12:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr3	169707076	HG4_Ill_manta_935	C	CCCAGGCTGGTCTGAAACTCCTGACTTCAAGTGATCCTCCAGCATTGGCCCCCCAAAGTGCTGGAATTATAAGATTGTCACCACACCCAGCCATGTTTCATAGTTAAAAAGCAATATAGAGCTGGGCACAGTGGCTCACGCCTGTAACTCCAGCAATTTGGGAGGCCGAGGTGGGTGGATGACAAGGTCAGGAGATCGAGGCCATCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGTTTCGTGGCGTGCGCCTGTAATCCCAGCTACTTCGGAGGCTAAGGCAGGAGAATGGCTTGAACCCGGGAGGCAGAGATTGCAGTGAGCTGAGATACCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8311:HG3_PB_pbsv_3732:HG2_PB_pbsv_3805:HG2_PB_PB10Xdip_20168:HG4_PB_SVrefine2Falcon1Dovetail_2324:HG4_PB_pbsv_3837:HG4_PB_HySA_5752:HG4_PB_SVrefine2PBcRDovetail_1975:HG4_Ill_manta_935:HG4_Ill_SVrefine2DISCOVARDovetail_2973:HG4_Ill_MetaSV_3533:HG4_Ill_GATKHCSBGrefine_2691:HG3_PB_SVrefine2PBcRDovetail_1788:HG3_Ill_manta_871:HG3_Ill_SVrefine2DISCOVARDovetail_2984:HG3_Ill_MetaSV_3559:HG3_Ill_GATKHCSBGrefine_2600:HG2_PB_SVrefine2PBcRplusDovetail_7704:HG2_PB_SVrefine2PB10Xhap12_2808:HG2_PB_SVrefine2Falcon2Bionano_1803:HG2_Ill_manta_1085:HG2_Ill_SVrefine2DISCOVARplusDovetail_9001:HG2_Ill_MetaSV_3390:HG2_Ill_GATKHCSBGrefine_2593:HG2_10X_SVrefine210Xhap12_2846:HG3_PB_SVrefine2Falcon1Dovetail_2389;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2846:HG2_Ill_GATKHCSBGrefine_2593:HG2_Ill_MetaSV_3390:HG2_Ill_SVrefine2DISCOVARplusDovetail_9001:HG2_Ill_manta_1085:HG2_PB_SVrefine2Falcon2Bionano_1803:HG2_PB_SVrefine2PB10Xhap12_2808:HG2_PB_SVrefine2PBcRplusDovetail_7704:HG3_Ill_GATKHCSBGrefine_2600:HG3_Ill_MetaSV_3559:HG3_Ill_SVrefine2DISCOVARDovetail_2984:HG3_Ill_manta_871:HG3_PB_SVrefine2PBcRDovetail_1788:HG4_Ill_GATKHCSBGrefine_2691:HG4_Ill_MetaSV_3533:HG4_Ill_SVrefine2DISCOVARDovetail_2973:HG4_Ill_manta_935:HG4_PB_SVrefine2PBcRDovetail_1975;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0454545;ClusterMaxSizeDiff=0.0430622;ClusterMaxEditDist=0.251174;PBcalls=13;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=410;DistBack=94548;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=3:169707077-169707144;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3836.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:91:1/1:0:26:0:27:./.:0:0:0:0:1/1:0:32:1/1:3:80:.:.:.
chr3	169951008	HG2_Ill_GATKHCSBGrefine_2594	T	TTTGGGGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3382:HG2_PB_pbsv_3806:HG3_PB_pbsv_3733:HG4_PB_HySA_5754:HG2_PB_HySA_7270:HG4_PB_SVrefine2PBcRDovetail_1976:HG4_PB_pbsv_3838:HG2_PB_assemblyticsfalcon_18473:HG3_PB_assemblyticsfalcon_18383:HG4_PB_SVrefine2Falcon1Dovetail_2325:HG3_PB_SVrefine2Falcon1Dovetail_2390:HG2_PB_HySA_7269:HG3_PB_HySA_5971:HG2_PB_SVrefine2PBcRplusDovetail_7705:HG2_PB_SVrefine2Falcon1plusDovetail_8312:HG2_Ill_GATKHCSBGrefine_2594;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2594:HG2_PB_SVrefine2Falcon1plusDovetail_8312:HG2_PB_SVrefine2PBcRplusDovetail_7705;NumExactMatchSVs=3;ClusterMaxShiftDist=0.220779;ClusterMaxSizeDiff=0.220779;ClusterMaxEditDist=0.266234;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=328;DistBack=21228;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:169951009-169951024;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3837.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:59:0|1:18:4:1:34:./.:0:0:0:0:0/1:31:8:0/1:3:23:.:.:.
chr3	170037435	HG2_Ill_MetaSV_3391	T	TGGCTTTTTTGTATTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCCGGCTAATTTTTGTATTTTTTTTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8313:HG2_PB_pbsv_3807:HG4_PB_pbsv_3839:HG2_PB_HySA_7271:HG4_Ill_MetaSV_3534:HG2_Ill_MetaSV_3391;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_MetaSV_3391:HG4_Ill_MetaSV_3534;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0866966;ClusterMaxSizeDiff=0.0866966;ClusterMaxEditDist=0.157664;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=-16;DistForward=11;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=64;REFWIDENED=3:170037389-170037452;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3838.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:28:0|1:35:4:4:22:./.:0:0:0:0:0/1:20:9:0/1:7:24:.:.:.
chr3	171304447	HG4_PB_SVrefine2Falcon1Dovetail_2328	G	GTCTGAAATGGGCTGGGCAAGCCATCAGAAACAACAGGCATTAGGAACTCTCTGGCATGAGCTGAAGCTTCTATCTGAAGGCAGAATTTCTTTTCTTCAGGGCAGCCTCAGGTCTGCTCTTAAAGCCTTTCAACTGACTCTATCAGGCCCACTCAGAGTATCTAGGATAACTTCCCTTACTGAAAGTCAACTGATTATGAACTTTAATCACATCTACAAAATATCTTCACAGTGACACCCAGATGAATGTTTGATTGAATAACTAGAAACAACGGCCTAGCCATGTTATGCATAAAACTGACAATTACC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2853:HG2_PB_pbsv_3811:HG4_PB_pbsv_3843:HG2_PB_HySA_7281:HG3_PB_pbsv_3739:HG4_Ill_MetaSV_3537:HG4_Ill_GATKHCSBGrefine_2695:HG3_Ill_MetaSV_3561:HG3_Ill_GATKHCSBGrefine_2603:HG2_Ill_MetaSV_3394:HG2_Ill_GATKHCSBGrefine_2597:HG4_PB_HySA_5768:HG4_PB_SVrefine2Falcon1Dovetail_2328:HG4_Ill_SVrefine2DISCOVARDovetail_2983:HG3_PB_SVrefine2PBcRDovetail_1791:HG3_PB_SVrefine2Falcon1Dovetail_2394:HG3_Ill_SVrefine2DISCOVARDovetail_2990:HG2_PB_SVrefine2Falcon1plusDovetail_8316:HG2_Ill_SVrefine2DISCOVARplusDovetail_9010;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2853:HG4_PB_SVrefine2Falcon1Dovetail_2328:HG4_Ill_SVrefine2DISCOVARDovetail_2983:HG3_PB_SVrefine2PBcRDovetail_1791:HG3_PB_SVrefine2Falcon1Dovetail_2394:HG3_Ill_SVrefine2DISCOVARDovetail_2990:HG2_PB_SVrefine2Falcon1plusDovetail_8316:HG2_Ill_SVrefine2DISCOVARplusDovetail_9010;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0602219;ClusterMaxSizeDiff=0.0602219;ClusterMaxEditDist=0.210526;PBcalls=9;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=308;DistBack=23912;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=118;REFWIDENED=3:171304448-171304565;PctSeqSimilarity=0.9969;PctSizeSimilarity=1;PctRecOverlap=0.9417;SizeDiff=0;StartDistance=-18;EndDistance=-18;GTMatch=0;TruScore=97;MatchId=3839.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:64:0|1:28:0:0:40:./.:0:0:0:0:0/1:21:12:1/1:2:25:.:.:.
chr3	171626373	HG2_Ill_MetaSV_3395	T	TTCCTGTTAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3383:HG3_PB_pbsv_3740:HG2_PB_pbsv_3812:HG2_PB_assemblyticsfalcon_18485:HG4_PB_HySA_5770:HG2_PB_SVrefine2PB10Xhap12_2811:HG2_PB_SVrefine2Falcon2Bionano_1806:HG2_PB_SVrefine2Falcon1plusDovetail_8317:HG2_Ill_MetaSV_3395:HG4_PB_SVrefine2PBcRDovetail_1979:HG3_PB_SVrefine2PBcRDovetail_1792:HG4_PB_SVrefine2Falcon1Dovetail_2329:HG3_PB_SVrefine2Falcon1Dovetail_2395:HG3_Ill_SVrefine2DISCOVARDovetail_2992:HG3_Ill_MetaSV_3562:HG3_Ill_GATKHCSBGrefine_2604:HG3_Ill_manta_873:HG3_PB_HySA_5987:HG2_PB_HySA_7283:HG2_PB_PB10Xdip_20169;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_MetaSV_3395:HG2_PB_SVrefine2Falcon1plusDovetail_8317;NumExactMatchSVs=2;ClusterMaxShiftDist=0.13141;ClusterMaxSizeDiff=0.128205;ClusterMaxEditDist=0.240385;PBcalls=14;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=-3;DistForward=-1;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:171626374-171626388;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3840.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:53:0|1:27:1:1:42:./.:0:0:0:0:0/1:27:13:0/1:9:35:.:.:.
chr3	172322936	HG2_Ill_MetaSV_3396	T	TTGAGTTTAACTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3384:HG3_PB_HySA_5989:HG2_PB_pbsv_3815:HG3_Ill_MetaSV_3564:HG2_PB_assemblyticsfalcon_18490:HG2_Ill_MetaSV_3396:HG3_PB_pbsv_3743:HG2_10X_SVrefine210Xhap12_2862:HG2_PB_SVrefine2Falcon2Bionano_1808:HG2_PB_SVrefine2Falcon1plusDovetail_8318:HG2_PB_HySA_7289;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2862:HG2_Ill_MetaSV_3396:HG3_Ill_MetaSV_3564;NumExactMatchSVs=3;ClusterMaxShiftDist=0.256228;ClusterMaxSizeDiff=0.256228;ClusterMaxEditDist=0.308244;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=143;DistBack=0;DistForward=6217;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:172322937-172322950;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3841.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:34:./.:16:8:6:24:./.:0:0:0:0:0/1:27:14:./.:.:.:.:.:.
chr3	172409230	HG3_Ill_MetaSV_3565	T	TGACTTTCGGTCACTCATCAATCTATTCACTCACTCAGCAAATATGTGAGTGTTTACTTTGTGCCAGGTACTTTTAGGAGTTGTGCACACAGTGGGGAAGTCCACAGACAAGCCCCTCCCCTCCAGAGCTTTCAGCCAGGCAGTGGAGATGGAATTACTTAGGAGTAATTAAACAAATCCAGTGACAGGAAGAACTGGCAAATGAGGGTAAAGAAAGAACAGGGTGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTGGGGAGGCTGAGGCAGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACTCCATCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCAGCACCTGTAGTCTCATCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGCAATATGAATGAATGTATTGCTGTTTATGTTTCCTTTCATTGTTGCTAAGTTCATGCCTTCTGAAGAAGCAGGCAGCTTACCCCTTACCATTTTCCTGCTTAGACTCTTCATGGAAAGGAAACAGGAATCCAGGGCAAGCACAAGTACTTTTTTTTCTTTTTTTTTTTTGGAGACAGGGTCTTGCTTTGTCACCCAGGCTGGAGTGCAATGGCGCAATCTTGGCTTACTGCAATCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCGTGCCACAGCGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGGTTTCACCATGTTGCCAGGGCTGGTCTCGAACTCCTGGCCTCCAGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATCGCACCTGGCTGCAAGCATATTTTGTTGGTCAATTCCACTGAGGCTGCCTTATTTGAGAAACGGGATGCACAGAGACTACTTCCTGTCAGGGTGTTATCACCAATACCCTCTCTACTGTAGAAGCTGTCCAGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2864:HG4_PB_pbsv_3847:HG2_PB_pbsv_3816:HG3_PB_pbsv_3744:HG2_PB_HySA_7291:HG3_PB_HySA_5990:HG4_Ill_MetaSV_3538:HG3_PB_SVrefine2PBcRDovetail_1795:HG3_Ill_MetaSV_3565:HG2_PB_SVrefine2PBcRplusDovetail_7711:HG2_PB_SVrefine2PB10Xhap12_2814:HG2_PB_SVrefine2Falcon2Bionano_1809:HG2_Ill_MetaSV_3397:HG4_PB_SVrefine2Falcon1Dovetail_2332:HG4_PB_SVrefine2PBcRDovetail_1981:HG2_PB_SVrefine2Falcon1plusDovetail_8319:HG2_PB_PB10Xdip_20170:HG3_PB_SVrefine2Falcon1Dovetail_2397;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_MetaSV_3397:HG2_PB_SVrefine2Falcon2Bionano_1809:HG2_PB_SVrefine2PB10Xhap12_2814:HG2_PB_SVrefine2PBcRplusDovetail_7711:HG3_Ill_MetaSV_3565:HG3_PB_SVrefine2PBcRDovetail_1795:HG4_Ill_MetaSV_3538;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0515513;ClusterMaxSizeDiff=0.0505967;ClusterMaxEditDist=0.210576;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=1021;DistBack=1806;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=448;REFWIDENED=3:172409231-172409678;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3842.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:136:1/1:0:30:0:14:./.:0:0:0:0:1/1:0:12:0/1:21:148:.:1001:.
chr3	172678665	HG2_Ill_FB_3556	C	CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	20	PASS	ClusterIDs=HG2_PB_pbsv_3817:HG4_Ill_FB_3620:HG4_PB_HySA_5774:HG2_Ill_FB_3556;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_FB_3556:HG4_Ill_FB_3620;NumExactMatchSVs=2;ClusterMaxShiftDist=0.269231;ClusterMaxSizeDiff=0.269231;ClusterMaxEditDist=0.326923;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=0;DistForward=1377;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=11;REFWIDENED=3:172678664-172678677;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3843.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:26:./.:26:10:4:9:./.:0:0:0:0:0/1:24:18:./.:.:.:.:.:.
chr3	173489428	HG3_Ill_svaba_4971	G	GAGCTTTATTCATTCATCTATTCTTTTTTTTAAAAAAATTTATTGAACCTTTATC	20	PASS	ClusterIDs=HG2_PB_HySA_7298:HG4_PB_pbsv_3850:HG4_Ill_Cortex_2510:HG3_Ill_Cortex_2522:HG2_Ill_Cortex_5914:HG2_PB_pbsv_3820:HG3_PB_pbsv_3747:HG3_PB_HySA_5995:HG4_Ill_svaba_4994:HG4_Ill_manta_938:HG4_Ill_Krunchall_5715:HG4_Ill_GATKHC_6507:HG4_Ill_GATKHCSBGrefine_2699:HG4_Ill_250bpfermikitraw_5469:HG4_Ill_150bpfermikitraw_5200:HG3_Ill_svaba_4971:HG3_Ill_scalpel_3903:HG3_Ill_manta_875:HG3_Ill_Spiral_4242:HG3_Ill_Krunchall_5415:HG3_Ill_GATKHC_6459:HG3_Ill_GATKHCSBGrefine_2608:HG3_Ill_250bpfermikitraw_5240:HG3_Ill_150bpfermikitraw_5075:HG2_PB_assemblyticsfalcon_18497:HG2_Ill_svaba_4872:HG2_Ill_manta_1088:HG2_Ill_SpiralSDKrefine_11635:HG2_Ill_Krunchall_5492:HG2_Ill_GATKHC_6394:HG2_Ill_GATKHCSBGrefine_2601:HG2_Ill_250bpfermikitraw_5389:HG2_Ill_150bpfermikitraw_4995;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4995:HG2_Ill_250bpfermikitraw_5389:HG2_Ill_GATKHCSBGrefine_2601:HG2_Ill_GATKHC_6394:HG2_Ill_Krunchall_5492:HG2_Ill_SpiralSDKrefine_11635:HG2_Ill_manta_1088:HG2_Ill_svaba_4872:HG2_PB_assemblyticsfalcon_18497:HG3_Ill_150bpfermikitraw_5075:HG3_Ill_250bpfermikitraw_5240:HG3_Ill_GATKHCSBGrefine_2608:HG3_Ill_GATKHC_6459:HG3_Ill_Krunchall_5415:HG3_Ill_Spiral_4242:HG3_Ill_manta_875:HG3_Ill_scalpel_3903:HG3_Ill_svaba_4971:HG4_Ill_150bpfermikitraw_5200:HG4_Ill_250bpfermikitraw_5469:HG4_Ill_GATKHCSBGrefine_2699:HG4_Ill_GATKHC_6507:HG4_Ill_Krunchall_5715:HG4_Ill_manta_938:HG4_Ill_svaba_4994;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0720721;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.19469;PBcalls=6;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=37256;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:173489429-173489430;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3844.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:31:0|1:35:3:7:25:./.:0:0:0:0:0/1:31:33:./.:.:.:.:.:.
chr3	174225443	HG2_PB_HySA_7302	A	AGGCAGATAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGTCGACTGCGACTGCAGTGGCGCAATCTCGCTCACTGCAAGCTCGCTTCCGGTTCAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCGCCCGCCACGCGCCCGCTAATTTTTGTATTTTAGTAGACGGGTTTCCCTTGTTAGCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCGCCTCGGCTCAAGTGCTGGATTACAGCGTGAGCCACCGCGCCGGC	20	PASS	ClusterIDs=HG3_PB_pbsv_3749:HG2_PB_assemblyticsfalcon_18501:HG2_PB_pbsv_3822:HG2_Ill_breakscan11_3385:HG2_PB_HySA_7302:HG3_PB_HySA_6002:HG2_PB_SVrefine2Falcon1plusDovetail_8322:HG2_PB_SVrefine2PB10Xhap12_2818:HG2_PB_PB10Xdip_20173:HG3_PB_SVrefine2PBcRDovetail_1797:HG3_PB_SVrefine2Falcon1Dovetail_2401:HG4_PB_SVrefine2Falcon1Dovetail_2336;NumClusterSVs=12;ExactMatchIDs=HG2_PB_HySA_7302;NumExactMatchSVs=1;ClusterMaxShiftDist=0.13373;ClusterMaxSizeDiff=0.13373;ClusterMaxEditDist=0.267409;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=3:174225444-174225444;PctSeqSimilarity=0.9485;PctSizeSimilarity=0.9072;PctRecOverlap=0.9072;SizeDiff=-32;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=3845.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:15:35:./.:2:23:9:4:./.:0:0:0:0:0/0:26:1:0/1:5:16:.:.:.
chr3	174410736	HG3_Ill_GATKHCSBGrefine_2609	A	AACTCATACCTTTCTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2820:HG2_PB_HySA_7305:HG2_PB_pbsv_3823:HG4_PB_HySA_5787:HG3_PB_pbsv_3750:HG2_PB_HySA_7304:HG4_PB_pbsv_3855:HG2_Ill_breakscan11_3386:HG2_PB_assemblyticsfalcon_18502:HG4_PB_SVrefine2Falcon1Dovetail_2338:HG3_PB_HySA_6003:HG2_PB_SVrefine2Falcon1plusDovetail_8323:HG4_Ill_MetaSV_3540:HG4_Ill_GATKHCSBGrefine_2701:HG3_Ill_MetaSV_3567:HG3_Ill_GATKHCSBGrefine_2609:HG2_Ill_MetaSV_3398:HG2_Ill_GATKHCSBGrefine_2604:HG3_PB_SVrefine2PBcRDovetail_1798:HG3_PB_SVrefine2Falcon1Dovetail_2402:HG2_PB_SVrefine2PBcRplusDovetail_7715;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2604:HG2_Ill_MetaSV_3398:HG3_Ill_GATKHCSBGrefine_2609:HG3_Ill_MetaSV_3567:HG4_Ill_GATKHCSBGrefine_2701;NumExactMatchSVs=5;ClusterMaxShiftDist=0.202985;ClusterMaxSizeDiff=0.202985;ClusterMaxEditDist=0.253602;PBcalls=14;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:174410737-174410750;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3846.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:./.:12:54:0|1:9:1:1:40:./.:0:0:0:0:0/1:23:14:0/1:5:37:.:.:.
chr3	174479954	HG2_Ill_SVrefine2DISCOVARplusDovetail_9026	C	CTTTTTTTTCTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCCATCTCAGCTCACTGCAAGCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGCAACTAGGACTACAGGCACCCGCCACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACTGCGCCTGGCTTCTATACATTTTCTTATAATTTATTTGGGACCATTTCATATACACGGTTGAAAAATTTTAAATGACTCCAAGGTCACTTATTTCAGAAAAAGCATTTATCATAAAAAAAAAAAAAAACCTGACATTTAGCCTGTAGTAATTAGGAAATAAATCTTCTATAATGATATTTAGAAAGAAAAACTACTGGGACTGGGACATATTTTTGAAAGAAAATAATTTGTAATTTTTTTTTTTTTTGAGATGGGGTCTGGCTCTATTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGGGTAGCTGGGACTGCAGGCACCCACCACCGCGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTAGCCAGGATGGTCTCAATCTCCTGACCTCGTCCCATGTTGGCCTCCCAAAGTGCTGGGTTTACAGGCATGAGCTACTGTGCCCAGCCAATAATTTGTAATTCTTAATGTTGTCAAAAAAATCCTCATGCTTTCTTTTTTCTTTTTTTTTCTGTTTTATGGGAGGTGGTAAATGAAGAAGAGAAAGGCAAATTGGGAAGAGAGTGGGGGAAGAGTCACATAGTTGAAAAATTCTTAAATTCAATCCATTTGAAATAGAAAGCTCTGCTAAAAAAGGTTAGGAGTTAAGTCAAATAACGCTTCATATTTGCTTAGTATTTAAATGCTGAGGGATATTATTGTTATGCAATTGTAATATAATCAGGTTACAGGGTCATTTTTCTTTCATTCAAATCTTGAAGTGATTATTTGGGCTTCTGTAATTGCATGGATAGATAGTTGCCACTTTTCTTTGTTGGCTAGATGATATGACAAAGTTCAGCTTAAGCTTTTGATATTTGCAAAAATATGACATTTGGCTTGCGTATTTCTTTTTTGTAAAACATGGAAAGTGCTAGGCAGAAAATGGACAGTTTGAAGATATTTTGAAATCTTTACTGCAGATAGTATATCACAACAATAATTTATTTATGCTTTATTCATTTATTATTGTTAAACAAGGCGTGATATGACCTTAGTTTGTCTTCCTGAACTTTTGAGCCAAATTTCTAAAGCTTGGCATGACAAGTATACTTAAAATAAACATCACTTACATGTGCAAATCAGTTAATTGCTTACACAGCTACCTACCAATTAGTCACTTATTAATGCAATTAGCTAGATGTACAGCTAATTTGGGGTAAAGAAAAAAATGTCTCAGTTCAGAATGACAGTCTAAAATCTAACTTAGTGGTTAGATTAAGTTAGGGTAAGAAAGTCTCATGCTCAGGCAAATATGGTCGGCGCTTCTCGTCAGTGGGTTCCATGGATATCCATGGATTCAACCAACTTCAGGTTGAAAACATTTTTAAAAAATTGCACTCTCTACTGATTATGTGCAGACTTATTTTTCTTATTTTACCCTCGACCATATGTTATAAGAACTATTTACATAACATTTACATTGTATTCTGTATTATAAGTAACCCAGAGATGATTTAAAATATATGGGAGGATGTGTATAGGTTATGTGCAAATACTACACCATTTTATACAAAAACTTGAGCATCCTCAGATTTTGTTATCCTCAGGAGATCCTGGAACCAATCCCACATGGATACCAAGGGATGCCTGTACACAAGTTTGGGCATAATTTTAGGGACCGAGGGTAGTATATAAACATATGGTCATTTGTTCTTGTGCTATCATCATTTATCTTCTTGGCTCCCACCTTGGAAAGCCATTATTGCCTTGAGGAAATCTGGATAATTTTTATGCTGCCTTTACGTCTTAAAAATCACATAAACATTTCAATGTTAAATTTCCTTATTTGTAGAACAAAGGCTTACGAGGTAATTGTAAGAATTAAATAACAAATCAAAGCATAAAACAATCATATTAATTGCTAGCATCTATTGACCTGTTTACTGAGTACTAGGTACACCACTAAATAATTCAGATACATTACATCATTTTCATCTTCTCCACAACCCTTTTAAAAGATAATCTTTTGTTCCCATTTTTCAGATTAGGAGACTGAAGTTTATAGTTTACCTGATTTGCCCATGATCACATAATGGTAGAAGTTGCATTCTAACTTAAGTTTCACCAACTCCAGAGGTCAGCATTCTTT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9026:HG3_PB_pbsv_3751:HG2_PB_pbsv_3824:HG3_Ill_GATKHCSBGrefine_2610:HG2_PB_PB10Xdip_20176:HG2_PB_HySA_7307:HG4_Ill_GATKHCSBGrefine_2702:HG2_PB_HySA_7306:HG3_Ill_Spiral_4246:HG4_PB_HySA_5788:HG3_Ill_SVrefine2DISCOVARDovetail_3008:HG3_PB_SVrefine2PBcRDovetail_1799:HG4_PB_SVrefine2Falcon1Dovetail_2339:HG3_PB_SVrefine2Falcon1Dovetail_2403:HG4_PB_SVrefine2PBcRDovetail_1985:HG2_PB_SVrefine2Falcon1plusDovetail_8324:HG2_PB_SVrefine2PBcRplusDovetail_7716:HG2_PB_SVrefine2PB10Xhap12_2821;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9026:HG2_PB_SVrefine2PBcRplusDovetail_7716:HG2_PB_SVrefine2PB10Xhap12_2821;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0682527;ClusterMaxSizeDiff=0.0678627;ClusterMaxEditDist=0.17656;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=2482;DistBack=14542;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=283;REFWIDENED=3:174479955-174480237;PctSeqSimilarity=0.9954;PctSizeSimilarity=0.998;PctRecOverlap=0.9144;SizeDiff=-5;StartDistance=-211;EndDistance=-211;GTMatch=0;TruScore=96;MatchId=3847.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:45:0|1:25:2:0:26:./.:0:0:0:0:0/1:14:21:0/1:68:129:.:2019:.
chr3	175013881	HG2_Ill_manta_1089	C	CCTTCCACATTGTCTCATAAAAATCTGAGTCGTATATTCATCAATGCTTTGACTATGATATTAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_3860:HG2_PB_pbsv_3829:HG2_PB_HySA_7315:HG4_PB_HySA_5794:HG3_PB_HySA_6008:HG4_Ill_manta_940:HG4_Ill_Krunchall_5728:HG4_Ill_GATKHC_6524:HG4_Ill_GATKHCSBGrefine_2706:HG4_Ill_250bpfermikitraw_5481:HG4_Ill_svaba_5005:HG3_Ill_svaba_4977:HG3_Ill_manta_877:HG3_Ill_Spiral_4251:HG3_Ill_Krunchall_5423:HG3_Ill_GATKHC_6471:HG3_Ill_GATKHCSBGrefine_2613:HG3_Ill_250bpfermikitraw_5248:HG3_Ill_150bpfermikitraw_5086:HG2_PB_assemblyticsfalcon_18512:HG2_Ill_svaba_4878:HG2_Ill_manta_1089:HG2_Ill_SpiralSDKrefine_11644:HG2_Ill_Krunchall_5503:HG2_Ill_GATKHC_6408:HG2_Ill_GATKHCSBGrefine_2606:HG2_Ill_250bpfermikitraw_5400:HG2_Ill_150bpfermikitraw_5004;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5004:HG2_Ill_250bpfermikitraw_5400:HG2_Ill_GATKHCSBGrefine_2606:HG2_Ill_GATKHC_6408:HG2_Ill_Krunchall_5503:HG2_Ill_SpiralSDKrefine_11644:HG2_Ill_manta_1089:HG2_Ill_svaba_4878:HG2_PB_assemblyticsfalcon_18512:HG3_Ill_150bpfermikitraw_5086:HG3_Ill_250bpfermikitraw_5248:HG3_Ill_GATKHCSBGrefine_2613:HG3_Ill_GATKHC_6471:HG3_Ill_Krunchall_5423:HG3_Ill_Spiral_4251:HG3_Ill_manta_877:HG3_Ill_svaba_4977:HG4_Ill_svaba_5005;NumExactMatchSVs=18;ClusterMaxShiftDist=0.208;ClusterMaxSizeDiff=0.208;ClusterMaxEditDist=0.24;PBcalls=6;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=9;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:175013880-175013882;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3848.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:25:0|1:36:4:2:17:./.:0:0:0:0:0/1:14:24:./.:.:.:.:.:.
chr3	175062932	HG3_Ill_150bpfermikitraw_5087	T	TAAATAAATATAAGTAAGCTAGTCAGTTATATATTATTGTCACCATTTTGAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2825:HG2_PB_pbsv_3830:HG2_PB_HySA_7316:HG3_PB_pbsv_3755:HG4_Ill_svaba_5006:HG3_PB_HySA_6009:HG4_Ill_scalpel_3722:HG4_PB_HySA_5795:HG4_Ill_manta_941:HG4_Ill_Krunchall_5729:HG4_Ill_GATKHC_6525:HG4_Ill_GATKHCSBGrefine_2707:HG4_Ill_250bpfermikitraw_5482:HG3_Ill_svaba_4978:HG3_Ill_manta_878:HG3_Ill_SVrefine2DISCOVARDovetail_3016:HG3_Ill_Krunchall_5424:HG3_Ill_GATKHC_6472:HG3_Ill_GATKHCSBGrefine_2614:HG3_Ill_FB_3557:HG3_Ill_250bpfermikitraw_5249:HG3_Ill_150bpfermikitraw_5087:HG2_PB_SVrefine2Falcon2Bionano_1815:HG2_PB_SVrefine2Falcon1plusDovetail_8329:HG2_Ill_svaba_4879:HG2_Ill_scalpel_3791:HG2_Ill_manta_1090:HG2_Ill_SVrefine2DISCOVARplusDovetail_9032:HG2_Ill_Krunchall_5504:HG2_Ill_GATKHC_6409:HG2_Ill_GATKHCSBGrefine_2607:HG2_Ill_250bpfermikitraw_5401:HG2_Ill_150bpfermikitraw_5005:HG2_10X_SVrefine210Xhap12_2876:HG2_PB_SVrefine2PBcRplusDovetail_7720;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2876:HG2_Ill_150bpfermikitraw_5005:HG2_Ill_250bpfermikitraw_5401:HG2_Ill_GATKHCSBGrefine_2607:HG2_Ill_GATKHC_6409:HG2_Ill_Krunchall_5504:HG2_Ill_SVrefine2DISCOVARplusDovetail_9032:HG2_Ill_manta_1090:HG2_Ill_scalpel_3791:HG2_Ill_svaba_4879:HG2_PB_SVrefine2Falcon1plusDovetail_8329:HG2_PB_SVrefine2Falcon2Bionano_1815:HG3_Ill_150bpfermikitraw_5087:HG3_Ill_250bpfermikitraw_5249:HG3_Ill_FB_3557:HG3_Ill_GATKHCSBGrefine_2614:HG3_Ill_GATKHC_6472:HG3_Ill_Krunchall_5424:HG3_Ill_SVrefine2DISCOVARDovetail_3016:HG3_Ill_manta_878:HG3_Ill_svaba_4978:HG4_Ill_250bpfermikitraw_5482:HG4_Ill_GATKHCSBGrefine_2707:HG4_Ill_GATKHC_6525:HG4_Ill_Krunchall_5729:HG4_Ill_manta_941:HG4_Ill_scalpel_3722:HG4_Ill_svaba_5006;NumExactMatchSVs=28;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.288462;PBcalls=9;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=53;DistBack=49050;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=61;REFWIDENED=3:175062933-175062993;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3849.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:41:./.:21:13:18:22:./.:0:0:0:0:0/1:18:30:./.:.:.:.:.:.
chr3	175100375	HG2_10X_SVrefine210Xhap12_2877	G	GATTTTAAAAGTTATATTTTAAGGCTAGCAGTCTGAAGTGAATAGAACAATAATTAATTTACTCTTAGCATTTAATGTATAACTTAATGTGGATTCTCAGAGCAGATTTAAATTTCTTTTTTTAGTTTAGAATATATTCCCACCGTCTGAAACAAATCTTGGCAAAATATGGCCCATCGCTTGTTTTATAAAACAAATTGTATCAGAACAAAACCATGCCTACTCACTTACTTATTGTCTATGCCTGATTTCATGATACAACTGAGTCAACAGTTGTGACAGAGACTGCATGTCTCACAAAACTTTTTACTATCTGGCCCTTTAAAGAAAAAGTTTGCTGACTTCTGTCTAAACCATAAAACTACATCCAATGAGGTCAAATGTATTCTATTCTAAGGAGAGTGAGTATTGTAAAAAATTTATGTTCAATAGGCTTTACTTATAAATTTTGCAATTGCATAAGCAGTGTTACCCAATACAGTTTTGTGGAAAATTTGTGGTGTGTTTAAAAAAACAAAAACGAAAAACAAAAACAAGATTCTGTAGCTGAATGGAAACTAGATATTCTTTGTTTCTTTATCTCACAATCAGTAAAATGTCAGAATAATAAAGATCTGAGAATTCATTCAATAAATTAACCATATTAGTTTTGTTTAAAGCATTTTAAACTTATTTGACCTCTCCTTCTCCAACCATGAAATATTTTTTAATATTTTTGCAGTATACTACTGTTTTCCGGAAGAGAATATTAGAAGTGGCCATCAGCTGAGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGACCGAGGCAGCCGAATCACTTGAGGTCAGGGCTTGGAGACCAGCCTACCTAACATGGCAAAACACTGTCTCTACTAAAAATACAAAAATTAGCCAGGCGTGGTGGTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGACATGGAGGCTACAGTGAGCCTAGATCATGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCATCTCAAAAAAACAAAAACAAAACAAAAGTGGCTGTCCTAAAAAATATGTAAATTGGAAATGTGACGACATGTAGGTCAAAGTAGCTTGCTGAATGGAATTCGTAGAATCATGGATTATAGATTTAAAGGAGCCCCACAGGTTGTTATTTAATGTAATTTCCAAACTTAACAGAAGATTCCTGAAAAATAAATTTAATAATTCAAATATGCCATTTTTTTACTGTATGAGAGATAGCTAATTATAAGCACCTTAAAGTTTAACAAAATGCATTTAATGGATTATGTATGAATATTGGTTTCACTTTCTGGAGATGAAAGACATTATCATTATGCTGTGATAAATGCTGAAACAACTGTGGATTTTTATTGGTTGGTGCTATAATTAATTTTAATAGGATATTTATGAGTTTCAACTACCTCTAGATTACTTTAAAACTAAGCACTGAGAACACCATCCACATGTTTTGTTATTTTACAGGTGATATAAGTTTAATTGGGCAGATAATCCAAGTAGATTTTTATTTTGCCTCCAGAATATTACTTTCACTTTAATGGTTTGAATGCTTCTTATCACTATTTTTGAATAGAATTAATTGAATTAATTTTTTTTTGATACTGTATGATGGAATAAATTTAGTAAAAGTGTTGGCATGTAACGTATTGGCCAAAAATATTGTTGAATTTGATAAACCCCAATGAGTATAAATTCAAAAAGATGAACTTTTAACTTCCTTTTAATATTTGATTTTAAATATAGCCACTTTTACATTTTCTTTTGTTCGTTTGTTTGGTAGAGATTAGATATCACTGTCTTGCCCAGGCTGGTCTCGAACTCCTAGGCTCGAGTGATCCTCCTGCTTCCACCTCCGAAAGTCTTGGGAATTATAAGCATGAGCCACCATGCCCAGCCTAGCCTATTTTATGGATTGACAATTGACTCTGCAATTTTATTTTCATATTCATTCATCTATTAAACGATTCCTTACACCATATACAAAAGTCACCTCAAGATGGACTAAAGACTTAAATATAAAACCTAAAACTATAAAAACCCTGGAAGATAACCTAGGAAATACCATTATGGAAATAAGACTAGACAAAGATTTCATGATGCACATGCCAAAAGCAATTGCAACAAAAACAAAAATTGACAAATGGGGCCTAATTAAACTAACACAGCAAAAGAAACTATCAACAGAGTAAAAGACAACCTAGAGAATAGAAGAAAATGTTGGCAAACTATACATCTGACAAACGTCTCATATCCAGAATTTATAAGGAAATTAAACGAATTTACAAGCAGAAAACAACTCCATTAAAAAGTTGGCAAAGGACATGAAGAGATACTTTTGAAAAGAAGACATACAAGTGACCAACAAGCATATGAAAAAGTGTTCAATGTCACTAACCAAAATGCAAATAAAAACCACAATGAGATGCCATTCTCACACCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAATAACAGATGCTGGTAAGATAGCAAAGAAAAGGGAACACTTATACACTGCTGGTGGGAATGTAAATTAGTTCAGCCAGTGTGGAAAGCAGTTTGGCGAGTTTTGAAAGCCTTTAAAACAGAGATCTTACTATGTGTTGCACTGGAATGTATTCAATCCCGTAACACAGAGGTCTTGTTTTGTATATTGCTGTGTCCCAATTGCCATGCACGCAGTAGCCACTCAAACTATCTGTTGAATAAAGGAATGATTCTAAGAGTGGAGAATCAGCAACAAAACACCACGTAGTCCCCATTCTGAATTGCTTAGAGATTAATAGGCTTTTGTAGCACTATGTAGAACATATACAATGAAGGTGAGCACAGGAATTGTAAGACCGATGCAAGGACAGACAAGCCTCAAATGGGATGGTTCTTGGTTTTGCCCAGGAAAGATTTCAAAGGTGAGCTGGTGGTGTTAAACAGCAACTTTTATTGAAGTGGCAGTGTACAGCAGCAGCAGAGGTATTGTCCTTGCTGAGCAGTGCTACCCCATAGGCGTGTGCCCAGAATAGCAGCTAAGAGGCAGTTCTGCACTCATATTAATACTCACTTCTAATTGCATGCAAATTAAGAGGCGGCTTATGCAGGAGTTTCTAGATGAGGGTGGTAACTTCTCGGTCATCAGGTCATTGCCATAGAAAGGGGCAGTAACTTTGGGCTGTTTCCATGGCAATGGTAAAATGACATGGCACACTTTTGGGCATGTCTTATGGAAAGTTGCTTCTGCCCTGGACCTGTTTTAGCTAGTCCTCACTTTGGTCTTGCCTCCAGAGTCAAGTCCCACCTACTATGTTTGAATCACTTAGGAAGAACCTAACCCACATTTTAGAAAGGGACCAGGGATGGCTTCCTTGCAAGAGGCAAACTTTGGCTTATGCCTAAAGGATGAGTAGGTTTTTTGTTGAAAGGAAGGATTTAACTTTTTTCAAAGAAGGGGGAATAACATGTACAAAAACCCAAAAGGTGAGAGTAGTAAATATTTGGGTTGTTTCCAATTTGGAGTATTTACAAATAAAGCTGTTATAATATGCATGTACAAGACTTAGTGTGGACATGTATCTACATTTTTCTTGGGGAATTCATGTGGTGGAATTTCTGGGTTTGGTATATGTGTGTTTAATTTTATAATAAACTCCCAGTTTTTCAATATAGCTGTCCAATTTTACATTCTGACCAGCCTGTTATACATCACATATCATTTCCCAAACTAGATATTATCATCATTTTTACTTTTGGCTTTTCTAAAGAATTTGTAGTAGTATCTCATTGTGTTAATAGATTGCATTTCCTTAATAATAAGCATATGTTGATGAAATTATTAACCTTTCAAATATTTTTGGAAGGTATCTTTTCTAATCTCTGGCCTAATTTTTGAAATTGGATAGTTTGTATTTTTATTATTGAGTTATAAAGTTCGTTCTATATTCTAAATACAAGACTTTCGTTGAACAGTGTCTCCCATTTTGTGGCATACCTTTTTGTTTTCATAAAGATGATTTTTAAATTTTAAATATCGATTTTTCTAATTTATCCGTTTTTTTTCTTTTGTAGTTTATACTCTTCAGGTCTTAACCTAAGAAATTATTTTGTCTGTCTAAAGTTGCCAACATTTTCTTATGTGTTTTCTTTGAGAAGGTTTATAGTTTTAGCTTTTACATTTAAGTCTATGATCCATTTCAAGTCAGTTTTTTGAGATGGTATTTAATTTTAATAAGTAATTGTAATATTGATCTAAACATTGCTTCTCTTTATTTTTCATTTGTGATGAATGTAGGAGAAAAGTTAAGTAGTGTAACCAAGATCACATCTAGTATAATAGAGTCAGAGTTGGAAACAGATGTAGCTTACTTCAAAATAAATATTTTGTACTATCTAACATAAACCGTAATTTACAAAAGGGAAACTGAGCTAATGACAGAAGTTATAGATGATAATTTAAATAGGTAAACCAAATAATTGTTAACCAACATCCAACTTAAATATAAAAATGACCTCCAAATTGGAAAATTTTGAATTCTCTATAGGGTAATCTAAATTTTTAGGTAGGAATTTTTTTCAGGGTTTCAACTATCAAGATTTTACACTCAAGGTAAATTGTCAATTGCTCCTAGTTAATCATTATTTGGAAATTTGGATCTAGCAGACAGAAATACAATTTCTAATTTGCTAATTTAAAAACATCATCATGGAAACACATTGCATTTTTAAATTCTCATTTTTAACTCTTTTATTTATTCAATAATTAATCAAATACCTAGTATTCTCTGTAAAAGGTTAATAAACATACAGAGATAAATATCACCTTATTGAAATTAAATTATTAATAAAATATTACATTTTACACAATATTTGACAATTCAAAGATAAAGTAAGATTTTTTTAATCAGCATCCAAGAAAAATTTTATGACTGTAATACAGAAAATATGTTGAAGTCCATTCATATTTGAGAAGTATAGTGAATTTTTTTATTAATTCAAGAAGATTAATTGTGTGTTTTGTATTTGTGAAATATAAGCATTTTATTCTTACAAGGTTAAGCATCCTTAACATCTTAACTTCTTAACGTCTTAATTTCTGTGGTCTGGAGTATACCTTTTCCTTTGATTTTAACATCTTTTCTCTTTCTTTGCTCATCATACCTTTCAAGATTCTATTCTATGTAAACCATTTTTCACTGATTACTCGCTCCTTTGTATTTTTGAGACACTTACTGTCTAATAATTATTTTGTGTTTACGTCTTACCATATATAAAGAAAAATCAGAGCATATTTGCAGGTGCTTATGCTGATGTTGTCCTGGTTCCTTGGCAGATCCTTTCCAGTGACACCTGTCCATCACTGAAGGCTTACCCTGTCATTAAAAGAAAGAAAAAAGTTAACTCTTGTATTAGTCTGTTCTTGCCTTGCTATAAAGTAACACCTGAGAATGGGTAATTTATAAAGAAAAGAGGTTTCATTGGCTAACAGTTCTGCAGGCTATACAGCTGAGCATTGGCTCAGCTTCTGGGGAGGCCTTGGGAAACTTCCAGTCATGGCAGGAGGTGAAGGGGAAGCAGGCACATCTTACATGGCCAGAGCAGGAGCCAGAGGTGGGGAGAGGGGCTACACACTTTTAGACAACCAGATCTCATGAGAGTTCCATCGGGAGAACAGCACTGGAGGATGGTGCTAAACCATTCATGAGAAACCGCCCTCAGGAGCCAATCACTTTGCATCAGGCCCCACCTCCAACGCTAGGGATTGCAATCCAACATGAGATTTCAGGGGGAACACAGATCCAAACTATATCGGCTATTATAAGGTTAATTTTTTAAACACCTTTATCCACATATCATAAAATTCACCTTTTAAAAATGTACAATTGCGGTTTAGTATATTCACGTAGTTGTTCAGCTCTCATCACTATCTAACTTTAGAACATTTTGTTTTCTCTTCTTTATTTTTAGAGACAGAGTCCCACTCTGTTGTCCAGCATGATCTCAGCACACTGCAACCTCTGCCTCCCAGGTTCGAGTGATTCTCATGACTCAGCCTCCCGAGTACCTAGGATTACAGGCATGCACCACCACGCCCAGCTAATTTTTTTTGTATTTTTAGTAGAGACAGGGTTTTGCCACGTTGGCCAGGCTACTCTCGAACCCCTGGCCTCAAGTGATCTGCCTGCCTTAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGCCCAGTCTAATTTTAGAACATTTTCTTCACCCCAATAGGAAACCCCATACTTCTAAAAGTCACTCTTTATTCTTCCTTCCCCCTAGGCCCTGGCGATCACTGATCTACTTTTTCATTATATAGATTTATTTATTATGGGCATTTCATACAAGTTGCATAATACAATAGGCCATCTTCTGTGACTGTCTTCTTTTACTTAGCGTAATGTTTTCAGTGTTCATTCATGTAGTACCATGCATTGGGACTTCATTCTCTTTATGGCCAATAATTTTTACGGCCAAATAATTTTCCATTATGTGAATATCCCATATTTGATTTGTCCCTTCCTTAATTAACAGCATTTTGGTTTTTTCCACTTTTGGCTCTTATGACTAACGCTGACATGAACATTTATTTACATCTTTTTCTGTGGATATATGTTTTTGATTTTCTTGTTTGTATAACTAAGCATGGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20180:HG4_PB_SVrefine2Falcon1Dovetail_2344:HG3_PB_SVrefine2PBcRDovetail_1802:HG4_PB_SVrefine2PBcRDovetail_1989:HG3_Ill_SVrefine2DISCOVARDovetail_3017:HG2_PB_SVrefine2PB10Xhap12_2826:HG2_Ill_SVrefine2DISCOVARplusDovetail_9033:HG2_10X_SVrefine210Xhap12_2877:HG2_PB_SVrefine2PBcRplusDovetail_7721:HG2_PB_SVrefine2Falcon2Bionano_1816:HG3_PB_SVrefine2Falcon1Dovetail_2407;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2877:HG2_Ill_SVrefine2DISCOVARplusDovetail_9033:HG2_PB_SVrefine2PB10Xhap12_2826:HG3_Ill_SVrefine2DISCOVARDovetail_3017;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00327259;ClusterMaxSizeDiff=0.00312384;ClusterMaxEditDist=0.00921728;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=6725;DistBack=37391;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=3:175100376-175100378;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3850.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:43:0|1:22:2:0:22:./.:0:0:0:0:0/1:40:21:0/1:200:341:.:6517:.
chr3	175951535	HG2_10X_SVrefine210Xhap12_2879	G	GATGAGAAATAGCGTTTGATAATAGCAATCTATGAAAATATAAAAACTATATTGCAAATATACCTAATAGTAAAACATTGAAACTGTTCTCTTTGCGATTGGGCACAAGACAATGGTAATTTTTGCTTCCACTTCTATTTAACAATTTACTGATTTTCTAGTCAGTACACTAAGTGGAGAGAAAAATAATATGTTTGAGGACTGAAAAAAAGAAACAAAACTTAACTTTCTATAGATTATATGTAAGGAGAAAATGCAAATAAATCTACCCATAAAAATTAGGGTGAATGAGTTAGCAAGTTTGCATGATACAATGATAATATATATTAATATTATCAATTGTTTCACTGTATAATAGCAATCAAAAGAAAATTTCTTTTAAATGATACCATCTATAATAGTGTAAGATATTAAATATCCTGGAATGAACCCTACAAAAGGTATACAGGGCTTCTCAACAGAAAATCAGAAACTTATATGAAGAGAAAATAAGGAATACCTAAATATAGCATGTTTACGATTAGGAAGAAACAATATTGTAAGGGTATCAATATTTTCTAAATTGATTTACAGGGTATGTGCAATCTCAATTTTAAAACCTTAAGAGTCTATATTTGTGGGTGTGTGCAAGTATATATGGCTTATCAAACTTAGTCTGATATTACTATGGCTATGCACACGATCAAGAACAGATGAGACACCCTGAGAAAAGAACGAAATTGGACTATATGTTCTACCAAATATCAAGATCACAGTAAAGCTACAGTAATTAACATTGTATCATATTGGTGCAAAACATAGAACTATTTCAATCAAAGTTTTCAGGAACTGACTCATGGATACTTGAATCATGATAGAGATCTTTGTAGAGTTGTGCTCTCTGAAGCAATAAAGTAATAATATTATTAATAATCAAAGTTTTAAATAATACTAGTAATATACATGCATTATCTCCAATTTATTATTAAAATTGTCCTCATTTTATAGTGGGGAAACTGAATAGGTTAATCGATTTGCTCACAGTCAAACAGAACGGAACAGTGGAGCCAAAATGTGCACTGGGCTATTCTGAGTCTAAAACATATGTATATTTTGTGCTTCCTATGCCAGACACTGTACTAGAAAATTTTGTGTATGTTACGGCACTACTAATAAAGAATTATTCTTAGAAATGTTTCATGTATGAAACATTTGGCTTATTGTGATGAAGCAGAAGTTTTTCTTGTCTATGTTTATGAACTTTAAAAAATGACAATTATAGTATTGATGACTTTTTATTGAGAAACAATTTTCCAGAGCAAACATCAATACACTAATCATTTAACTAGATTCTATACAGAAAACATAAATCCTAATTTTTTGTTCTTATTACTTTATGAGAAATTTTACAATAATTTGGTATGTGTTAATTTTACCCATCACAACTTCTGTTGTGAGTTTATTCATGACTACTATTTCTCTCATGTCTATTTTTTTCTCAGGTCAGATTTTTCTGATCTAATTTTATAAAGAAAATTAAAATTTTCAATAAATTTTCATTGCCTTCTGCATTTTAAGCTCCTGTTTTGTTTTGAGCTTATTTGTTCTATGAAATCTAATTTTACCCAGATCAATTTTGTTAGGTTTCTGTCATGCCAATAAGACATATTTTCTTCATTTTGTTTTGCATTCATAATAAATTATACTCAGATTCATTCACATTGTCATCAGAGTTAAAGTGGTTGGATCCAAATTTCCTGCTGTATAGCTATTTGTATTCTAGTTTTTGTTCAGATAGTGCAGTTGAGGCTCACACAGTAACTGCCATGACATACATTTGAAAACAGGTCTGTCTGACAACCAGGTTTCCAGTTTTTCTTCTGTATGCTAATGTCTCTGACATCAATTATCTCAAATTTAATTCTGACTTTGGGGATAATTTCGCCTTGCCTTCCTTACAGCTTGTTGTCTGGATAAAATGTGGAAATTTTGTAATCTGTATATAATATGCAAGTTTAGACATAATTTATCTATGTAAGTATCCTTTATTATTATTACTATGATCCAAATGTTTGTGTGCCTTCGCCAGATTCAGAATCATTCAGGGCCTTCATCCTGGAATTCCCAGATCCCAGAACTGTGAGAAATAAATTCTTGTTGTTTATAAGCCACCCAGTTTATAGTAAAGCCACCTGAATGAACTGAGACAATTATTAACATTTATTCTATTTGAATGTATTAGATAAACCTGTCTTTTTGCAGCTCAATAAATTTCCTTGGCCTGCTTCTAAGTTGGATAACCATTAAAGATATATCTGATTCTGGCCGGGTGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCAGGACCAGCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAAACACAAAAAAATTAGCCAGGCGAAGTGGCGGATGCCTGTAATCCCACCTACTTGGGAGACTGACGCAGGAGAATTGCTTGAACTGGGGATGTGGAGGCTTCAGTGAGCCAAGATCATACCATTGCACTCCAGCCTGAGCGACAAGAGTGAAACAAAACAAAACAAAAAAAGGCTCTGATTCTGAAAGGTGAAGCAGCCAGCTGGACTTCCTGGGTCGACTGAGGACTTGGAGAACTTTTCTGTCTTACAAGAGGATTGTAAAATGCACCAGTGCTCCATAAAAATGCACCAATCAGCGCTCTGTAGCAAGCTAGAGGTTTGTAAAATAGGCCAGTCAGCACTCCGTAAAATGGACCAATCAGCACACTGTAAAATGGGCCAATCAGCACTCTGTAAAATGGACCAATTAGCAGGACATAAACGGGGACAAATAAGGGAATAAAAGCTGGCCACCCCCAGCCAGCAGCGGCAACCCACTCAGGTCCCCTTCCACGTTGTGGAAGCTTTGTTCTTTCGCTCTTCACAATAAATCTTGCTGCTGCTCACTCTTTGGGTCCCTGCCATCTTTAAGAGCTATAACACTCACCGTGGAGGTTTGCAGCTCCATTCTTGAAGTCAGCGAGACCGTGAACCCACCAGAAGGAACGAACTCCGGACACAATTCTATATATTAATCTTATTTATTTTTTAGTATTAATCCTTGATATGTATTAGGTAAGAGATCTTTTATGTTTATTATACTTGTTAACTCATGAGTCTTCCCATTCTTTTGAGCAATGAATATGAACATTTTCTCATCTGGTAATTTCTTACTCTAAGTTTGCATTTGGCCATGTTTGAGTTATGAATACACAGGGAAAGTACCATTGCTAAATAATTTTTACAATTACCCTTTTCCTTTTTTTCTTCTATAAAGTATTTGATGAGGTTTAGAAAAGAAAGCAAGAGTTTAATTAAAATCATGTAAACGAGCAGATTTTCACGTCTGAACATGTTAAACAGAAATTGGATACAGCCTCATGCTGTAAACATTTGAAAACTGAACAAAATGTATGAAGTCACTTTTCAGACATTATACAAAAGCCAGCACAGAACCATGACACCCAAGAGTAAAGTAAACATAATGGTGGAGCCTGGTTTCCCAGACTTTCATTCTAGCAAGGGTGGGAACAGAATGCCAAGAAAAATGAGGCTGCCTTACTGAAGTGAAGAGCCAGAGATCAGAGATCAGGAACATTGAGAGAGTTACAAGTAGTGGGACAGGGTTTCAGTGAGCCGGAGGTTATATAGCAAAAAACAAAAACAAACAAAGAAAAAAAAAAACAGCTCCAAACATCTTCATAAGGATTCTCTTGAGTCTTTGCTGAACATGAACTTTAAGTTATGCATAGATATGATAAAACTTCAATGACTTCTGAGCTGAATATTGAACAATTCCTAAAGTGTCAAACATTCCAGGAGGACATTTAAACTCTGACAAGCCAGAGCAAGACCTTGTTGATTACTCAAGCAATCTGTTGAGAACCAAAGATGGACCTGATAGTAATACATAGCACCTCACCTCTAGATTAAAGAATAATTAAGGACTGCTTTTTAAAATGTGTCTCAAAGATTCAAGCTAATCTGTTGCTTGACAGAAACAAGAGCCAACGAATTTAAAGGAATAAAATAATATTCAGCCACTCAATGGTAAAGCACTTGCAGTGTTCAGAATCTGGCCAAGTGCAGGAAATTGAAATGCATAATCAGGAAAAACTAGTCAATATAAATGAACCCAGAAATGAGAGAAATTTTGGAATTATCAGACAAGAACTTTAAAATAGCTAATGTAAATATGCCAAAATGCTCAAAGGAAAACAAAAACATAAAGAGAAGAGAAATTAAGATATGAAAATAGCAATGTAGAACTTATAGAATTGAAAAATATAATAGCTTAAGAAAAAAACTAGATATGATTAATCGCAGATGAGAAACTGCAGAAGAAAAGATCAGTGAATATGACTCTATTATTAATAGAAATGGTCAAAATTGAAGTAAATAAAAACAAAAGACCTAAGAAAATGAGCAGTATAAAATGGGACAGTATCAAATAATCGAACACATGGGTATTTGGATTTCCTTAAAATGGGGAGAAAAAAATTGGAAAAATGATGAATAAAAATTTTTCCAATGTTGATAAAAATCATGAACTAGTAAATTCAAGAAAAATATAAAACAACAAGTAGGCTAAAAAAACCAACAAACAAAACAAAAGCACATGGAGGCATATAATCCAACTACACAAAAACAGTTATGAAATTATAAAATCACCCAGACAAAAAGACACATTATGGATACAGGAACAAAGATATGAATGACTCCAGGCTTCTCAACAGGAACTTTACAGGCAATGGAACATTATTTTTAAAGTGCTAAAAGAGAAAAGAAAAAAAATCTATATCCAGCAAAAATACTTTCACAAATGAAAGTGAATGAAGATTTTTTTTTTTCAGACAGACAAAAGCTGAGAGGATGTGTTTTCAACAGACCCACAGTATAAAAAATATCTTCAGGCTGAAGGAAAACAATGCCAGATGAAAACTTGGATTTATAAAAAGAAATGAACAGCTCCAGAAATGGTCATTCTGTGAGCAAATATGCAATAGTTTTCTGTCCGTTTAAAAAATTTTTTTTGAAAGAAAAATACTTAAAATGAAAATAACAATGTACTGTAAAGTTTACAACATGTCTAGAAGGGAGAATGCCTGACATCAATAGCACAAAATATAAGGAGCACACTATTGTAATTATACTGTGTGATGTTCAGTTATACATAAAGAAGCAAAATATTATTTGAATATAGACTTTATTAATTTAAAGATTCATTTAAAAAACCATACACTAGCCTTTAAAAAGTAAAACAAAGAGGTATTGCAAATAAGCCAATAATGGAGATAAAATGTAATATTAGAGAGTAAAAATAATTCAAAAAAAGAAAGAATGGAAAAATATGTAAAAAAGCAAGATTGTAGTTAAACTCAACCATGAAAATAATTACAATAAATTTGAATTAATCTATACTTTATTTGAATTGAATTACTTTAAATATGTACTTTTTGATATGGTAGCCACTAGCTACATGTGGCTATTTAGCATTTGGAGTGTGGCTAACATACATCAAGAACTAAATTTTTAACTTTATTAAATGTTTAATTAAAGCTTAAATTGGAAAACAAACAGTTCAGTTATTCTGAGACTTTTCAGTATTTTTGGAACCCTGCATGTATGTGAATCAACATTTTTAACTGTAAATTTTAAGAAACCTAAAGATAAGATATTTGCAATGAAAATTTTATGTTAAACTTGAAATAT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20188:HG3_PB_pbsv_3761:HG4_PB_SVrefine2Falcon1Dovetail_2348:HG2_PB_assemblyticsfalcon_18523:HG2_PB_SVrefine2Falcon1plusDovetail_8333:HG2_PB_SVrefine2PBcRplusDovetail_7725:HG2_PB_SVrefine2PB10Xhap12_2830:HG2_10X_SVrefine210Xhap12_2879:HG3_PB_SVrefine2PBcRDovetail_1806:HG3_Ill_SVrefine2DISCOVARDovetail_3022:HG3_PB_SVrefine2Falcon1Dovetail_2411;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2879:HG2_PB_SVrefine2PB10Xhap12_2830:HG2_PB_SVrefine2PBcRplusDovetail_7725;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0756811;ClusterMaxSizeDiff=0.0750084;ClusterMaxEditDist=0.144299;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=5775;DistBack=10078;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:175951536-175951537;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3851.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:71:0|1:44:2:1:28:./.:0:0:0:0:0/1:26:20:0/1:188:295:.:6527:.
chr3	176091317	HG4_Ill_GATKHCSBGrefine_2712	T	TAAAAACTACCAATAGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_3869:HG2_PB_PB10Xdip_20189:HG3_PB_pbsv_3764:HG4_PB_HySA_5805:HG2_Ill_breakscan11_3389:HG2_PB_assemblyticsfalcon_18527:HG4_PB_SVrefine2Falcon1Dovetail_2349:HG3_PB_HySA_6021:HG3_PB_SVrefine2Falcon1Dovetail_2412:HG2_PB_HySA_7334:HG4_PB_SVrefine2PBcRDovetail_1994:HG2_Ill_MetaSV_3400:HG2_PB_SVrefine2PBcRplusDovetail_7726:HG2_PB_SVrefine2PB10Xhap12_2831:HG2_PB_SVrefine2Falcon2Bionano_1820:HG2_10X_SVrefine210Xhap12_2880:HG4_Ill_GATKHCSBGrefine_2712:HG3_PB_SVrefine2PBcRDovetail_1807:HG3_Ill_MetaSV_3569:HG3_Ill_GATKHCSBGrefine_2619:HG2_PB_SVrefine2Falcon1plusDovetail_8334:HG2_PB_pbsv_3838;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8334:HG3_Ill_GATKHCSBGrefine_2619:HG3_Ill_MetaSV_3569:HG3_PB_SVrefine2PBcRDovetail_1807:HG4_Ill_GATKHCSBGrefine_2712:HG4_PB_SVrefine2Falcon1Dovetail_2349;NumExactMatchSVs=6;ClusterMaxShiftDist=0.257235;ClusterMaxSizeDiff=0.257235;ClusterMaxEditDist=0.308682;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=157;DistBack=11748;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:176091318-176091333;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9874;PctRecOverlap=0.9874;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3852.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:89:1/1:3:34:1:35:./.:0:0:0:0:1/1:0:19:./.:.:.:.:.:.
chr3	176143018	HG2_10X_SVrefine210Xhap12_2881	T	TAAAAAAAAAAGAAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTTTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20190:HG2_PB_pbsv_3839:HG3_PB_HySA_6023:HG2_PB_assemblyticsfalcon_18529:HG4_PB_HySA_5806:HG3_PB_pbsv_3765:HG3_PB_SVrefine2Falcon1Dovetail_2413:HG3_Ill_MetaSV_3570:HG3_PB_SVrefine2PBcRDovetail_1808:HG2_PB_SVrefine2Falcon2Bionano_1821:HG2_PB_SVrefine2Falcon1plusDovetail_8335:HG2_Ill_SVrefine2DISCOVARplusDovetail_9035:HG2_Ill_MetaSV_3401:HG2_10X_SVrefine210Xhap12_2881:HG4_PB_SVrefine2PBcRDovetail_1995:HG4_PB_SVrefine2Falcon1Dovetail_2350:HG4_Ill_SVrefine2DISCOVARDovetail_3006:HG4_Ill_MetaSV_3543:HG4_Ill_GATKHCSBGrefine_2713:HG3_Ill_GATKHCSBGrefine_2620:HG2_PB_SVrefine2PBcRplusDovetail_7727:HG2_Ill_GATKHCSBGrefine_2613:HG3_Ill_SVrefine2DISCOVARDovetail_3024:HG2_PB_SVrefine2PB10Xhap12_2832:HG4_PB_pbsv_3870:HG3_PB_HySA_6022:HG2_Ill_breakscan11_3390;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2881:HG2_Ill_MetaSV_3401:HG2_Ill_SVrefine2DISCOVARplusDovetail_9035:HG2_PB_SVrefine2Falcon1plusDovetail_8335:HG2_PB_SVrefine2Falcon2Bionano_1821:HG3_PB_SVrefine2PBcRDovetail_1808;NumExactMatchSVs=6;ClusterMaxShiftDist=0.147783;ClusterMaxSizeDiff=0.147783;ClusterMaxEditDist=0.233169;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=304;DistBack=411;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:176143019-176143034;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3853.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:84:1/1:0:27:1:29:./.:0:0:0:0:1/1:0:19:1/1:2:48:.:.:.
chr3	176575679	HG3_Ill_GATKHC_6494	C	CCACGATTACATCCTCCAGCAATGAAGAAGGAAAGACAATTATGAAGAAAAATGCCTTATAAGGATTT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20196:HG3_PB_pbsv_3769:HG4_Ill_svaba_5020:HG2_PB_pbsv_3843:HG4_Ill_manta_945:HG4_Ill_Krunchall_5746:HG4_Ill_GATKHC_6542:HG4_Ill_GATKHCSBGrefine_2716:HG4_Ill_Cortex_2516:HG4_Ill_250bpfermikitraw_5496:HG4_Ill_150bpfermikitraw_5227:HG3_Ill_svaba_4995:HG3_Ill_manta_881:HG3_Ill_Spiral_4266:HG3_Ill_Krunchall_5446:HG3_Ill_GATKHC_6494:HG3_Ill_GATKHCSBGrefine_2623:HG3_Ill_Cortex_2526:HG3_Ill_250bpfermikitraw_5269:HG2_PB_assemblyticsfalcon_18536:HG2_Ill_svaba_4903:HG2_Ill_manta_1091:HG2_Ill_SpiralSDKrefine_11658:HG2_Ill_Krunchall_5530:HG2_Ill_GATKHC_6434:HG2_Ill_GATKHCSBGrefine_2616:HG2_Ill_Cortex_5924:HG2_Ill_250bpfermikitraw_5421:HG2_Ill_150bpfermikitraw_5022:HG2_PB_HySA_7347;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5022:HG2_Ill_250bpfermikitraw_5421:HG2_Ill_Cortex_5924:HG2_Ill_GATKHCSBGrefine_2616:HG2_Ill_GATKHC_6434:HG2_Ill_Krunchall_5530:HG2_Ill_SpiralSDKrefine_11658:HG2_Ill_manta_1091:HG2_Ill_svaba_4903:HG2_PB_assemblyticsfalcon_18536:HG3_Ill_250bpfermikitraw_5269:HG3_Ill_Cortex_2526:HG3_Ill_GATKHCSBGrefine_2623:HG3_Ill_GATKHC_6494:HG3_Ill_Krunchall_5446:HG3_Ill_Spiral_4266:HG3_Ill_manta_881:HG3_Ill_svaba_4995:HG4_Ill_150bpfermikitraw_5227:HG4_Ill_250bpfermikitraw_5496:HG4_Ill_Cortex_2516:HG4_Ill_GATKHCSBGrefine_2716:HG4_Ill_GATKHC_6542:HG4_Ill_Krunchall_5746:HG4_Ill_manta_945:HG4_Ill_svaba_5020;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0583942;ClusterMaxSizeDiff=0.0437956;ClusterMaxEditDist=0.26087;PBcalls=5;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=67;DistBack=13585;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:176575680-176575681;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3854.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:0:34:1:13:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr3	176683776	HG2_10X_SVrefine210Xhap12_2885	T	TTCCAAAAATTCACATGTTAAAAATCAGGACCACCCAAAAAAGATAAAAATCATACATCCTGTCATTCACCAATTGGAATAGGAGCTAAAATTGGCATTGAATGGTATAGCTTATTAAATGGCTTGATTACATTATCTGGGATATTCTACCCTTACCAGAACTGGGAGGGAATTAGAATAATTCAACCATATAGACAAGAATCTGAGGCTTAAAGAGGTAGAGTAGTTTTCTCCACATGAACAAGATAATAATTTGTAGAGCCAGGCTCAAACACAAGTCTTCTTATCCTAGCACGTGAGCAGGGACTTTGTTTGATTCACTCATCTGTGTCTAGATCCTAGAACATGGCCTGGCACACAGTAGGCTCTCAATAAATATTTGTCAAGTGAATGGATTATAAGCCCTATGTGCTTTGCTCTGAGTCACACTGCCTTTGTAGGAAATACATAATTCTGCTACTTTGAATGATGTTCACCCTCTGGCTTCCCGTATTCTCTTTCCCACAGCCCA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3404:HG4_PB_pbsv_3874:HG2_PB_assemblyticsfalcon_18539:HG4_PB_SVrefine2PBcRDovetail_1996:HG4_Ill_SVrefine2DISCOVARDovetail_3008:HG2_PB_SVrefine2PBcRplusDovetail_7729:HG2_PB_SVrefine2Falcon1plusDovetail_8338:HG2_Ill_SVrefine2DISCOVARplusDovetail_9037:HG2_10X_SVrefine210Xhap12_2885:HG4_PB_SVrefine2Falcon1Dovetail_2352:HG4_Ill_Cortex_2517:HG3_PB_SVrefine2Falcon1Dovetail_2416:HG2_Ill_Cortex_5926:HG2_PB_pbsv_3845:HG4_PB_HySA_5812:HG4_Ill_Spiral_321:HG2_Ill_Spiral_273:HG4_Ill_MetaSV_3544;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2885:HG2_Ill_SVrefine2DISCOVARplusDovetail_9037:HG2_PB_SVrefine2Falcon1plusDovetail_8338:HG2_PB_SVrefine2PBcRplusDovetail_7729:HG4_Ill_SVrefine2DISCOVARDovetail_3008:HG4_PB_SVrefine2PBcRDovetail_1996;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0522244;ClusterMaxSizeDiff=0.0522244;ClusterMaxEditDist=0.146388;PBcalls=9;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=510;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=3:176683777-176683781;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3855.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:47:./.:5:25:19:8:./.:0:0:0:0:0/1:23:14:0/1:10:35:.:.:.
chr3	177175149	HG2_Ill_250bpfermikitraw_5430	A	ATCACCTGCTCTGTCCTCAGTCATCCTTAGTCACCTGCTCTGTCCTCAGTCATCCTTAGTCACCTGCTCTGTCCTCAGTCATCCTTAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7730:HG2_PB_HySA_7352:HG2_PB_pbsv_3846:HG4_PB_HySA_5816:HG3_PB_HySA_6038:HG4_PB_pbsv_3878:HG4_PB_SVrefine2Falcon1Dovetail_2355:HG4_Ill_SVrefine2DISCOVARDovetail_3010:HG4_Ill_Krunchall_5757:HG4_Ill_250bpfermikitraw_5504:HG3_PB_SVrefine2Falcon1Dovetail_2419:HG3_Ill_Krunchall_5451:HG3_Ill_250bpfermikitraw_5275:HG2_PB_SVrefine2Falcon1plusDovetail_8339:HG2_Ill_SVrefine2DISCOVARplusDovetail_9039:HG2_Ill_Krunchall_5536:HG2_Ill_250bpfermikitraw_5430;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5430:HG2_Ill_Krunchall_5536:HG2_Ill_SVrefine2DISCOVARplusDovetail_9039:HG2_PB_SVrefine2Falcon1plusDovetail_8339:HG3_Ill_250bpfermikitraw_5275:HG3_Ill_Krunchall_5451:HG3_PB_SVrefine2Falcon1Dovetail_2419:HG4_Ill_250bpfermikitraw_5504:HG4_Ill_Krunchall_5757:HG4_Ill_SVrefine2DISCOVARDovetail_3010:HG4_PB_SVrefine2Falcon1Dovetail_2355;NumExactMatchSVs=11;ClusterMaxShiftDist=0.239521;ClusterMaxSizeDiff=0.227545;ClusterMaxEditDist=0.263473;PBcalls=9;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=87;DistBack=-51;DistForward=-1;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=71;REFWIDENED=3:177175150-177175220;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3856.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:25:0|1:15:3:3:19:./.:0:0:0:0:0/1:22:14:./.:.:.:.:.:.
chr3	178111036	HG3_Ill_GATKHCSBGrefine_2625	T	TAAAAATGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAATAAAAAAATAAAAAAATAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_3777:HG4_PB_pbsv_3885:HG2_PB_assemblyticsfalcon_18552:HG2_PB_HySA_7363:HG4_PB_HySA_5824:HG4_Ill_MetaSV_3547:HG4_Ill_GATKHCSBGrefine_2724:HG3_Ill_MetaSV_3573:HG3_Ill_GATKHCSBGrefine_2625:HG2_Ill_GATKHCSBGrefine_2623:HG2_Ill_manta_1093:HG2_Ill_MetaSV_3407:HG2_PB_SVrefine2Falcon1plusDovetail_8344:HG2_PB_pbsv_3853;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2623:HG3_Ill_GATKHCSBGrefine_2625:HG3_Ill_MetaSV_3573:HG4_Ill_GATKHCSBGrefine_2724:HG4_Ill_MetaSV_3547;NumExactMatchSVs=5;ClusterMaxShiftDist=0.184087;ClusterMaxSizeDiff=0.184087;ClusterMaxEditDist=0.2304;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=331;DistBack=4425;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=3:178111037-178111045;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3857.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:28:1|0:0:26:36:1:./.:0:0:0:0:0/1:35:19:0/1:11:50:.:.:.
chr3	178732981	HG4_Ill_150bpfermikitraw_5248	A	AATTTTAATATTTTATAGTTTAATTTTTATGTCAGCAAGATTTCAATGTTTGGTAAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7737:HG2_PB_pbsv_3859:HG2_PB_assemblyticsfalcon_18557:HG4_PB_pbsv_3889:HG4_Ill_svaba_5040:HG2_PB_PB10Xdip_20213:HG4_Ill_manta_949:HG4_Ill_Krunchall_5771:HG4_Ill_GATKHC_6567:HG4_Ill_GATKHCSBGrefine_2726:HG4_Ill_250bpfermikitraw_5518:HG4_Ill_150bpfermikitraw_5248:HG2_Ill_svaba_4926:HG2_Ill_Krunchall_5554:HG2_Ill_GATKHC_6462:HG2_Ill_GATKHCSBGrefine_2625:HG2_Ill_250bpfermikitraw_5443:HG2_Ill_150bpfermikitraw_5044:HG2_PB_HySA_7371:HG4_PB_HySA_5833:HG4_Ill_SVrefine2DISCOVARDovetail_3015:HG2_PB_SVrefine2PB10Xhap12_2844:HG2_Ill_SVrefine2DISCOVARplusDovetail_9043:HG2_10X_SVrefine210Xhap12_2894;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5044:HG2_Ill_250bpfermikitraw_5443:HG2_Ill_GATKHCSBGrefine_2625:HG2_Ill_GATKHC_6462:HG2_Ill_Krunchall_5554:HG2_Ill_svaba_4926:HG4_Ill_150bpfermikitraw_5248:HG4_Ill_250bpfermikitraw_5518:HG4_Ill_GATKHCSBGrefine_2726:HG4_Ill_GATKHC_6567:HG4_Ill_Krunchall_5771:HG4_Ill_manta_949:HG4_Ill_svaba_5040;NumExactMatchSVs=13;ClusterMaxShiftDist=0.140351;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.254237;PBcalls=8;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=56;DistBack=-52;DistForward=21;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=72;REFWIDENED=3:178732970-178733041;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3858.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:38:./.:6:20:16:7:./.:0:0:0:0:0/1:31:36:./.:.:.:.:.:.
chr3	180484096	HG2_Ill_GATKHCSBGrefine_2629	T	TGTGAGTACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3391:HG4_PB_assemblyticsfalcon_18156:HG4_PB_SVrefine2Falcon1Dovetail_2364:HG2_PB_assemblyticsfalcon_18563:HG2_PB_pbsv_3866:HG4_PB_pbsv_3898:HG4_PB_HySA_5840:HG4_Ill_MetaSV_3555:HG4_Ill_GATKHCSBGrefine_2736:HG2_Ill_MetaSV_3411:HG2_Ill_GATKHCSBGrefine_2629:HG2_PB_SVrefine2Falcon1plusDovetail_8350:HG3_PB_SVrefine2Falcon1Dovetail_2432;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2629:HG2_Ill_MetaSV_3411:HG4_Ill_GATKHCSBGrefine_2736:HG4_Ill_MetaSV_3555;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0483384;ClusterMaxSizeDiff=0.0455235;ClusterMaxEditDist=0.241113;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=8274;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=3:180484097-180484110;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3860.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:0|1:31:1:0:23:./.:0:0:0:0:0/1:25:10:0/1:8:21:.:.:.
chr3	181870921	HG3_Ill_250bpfermikitraw_5297	T	TCAGGGATATTGGCCTGAAGTTTTCTTTTGTTGTTGTGTCTCTGCCAGGTTTTGTTATGAGGATGATGCTGGCCTCATAAAATGAGTTAGGGAGGAGTCCCTCTCTTTCTACTGTTTGGAATAGTTTCAGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2904:HG3_PB_HySA_6066:HG3_PB_pbsv_3796:HG2_PB_HySA_7392:HG4_PB_HySA_5850:HG4_PB_pbsv_3905:HG4_PB_HySA_5849:HG2_PB_PB10Xdip_20217:HG2_PB_pbsv_3869:HG3_PB_HySA_6065:HG4_PB_SVrefine2PBcRDovetail_2013:HG4_PB_SVrefine2Falcon1Dovetail_2370:HG4_Ill_SVrefine2DISCOVARDovetail_3027:HG3_PB_SVrefine2PBcRDovetail_1822:HG3_PB_SVrefine2Falcon1Dovetail_2436:HG3_Ill_SVrefine2DISCOVARDovetail_3048:HG3_Ill_250bpfermikitraw_5297:HG2_PB_assemblyticsPBcR_17968:HG2_PB_SVrefine2PBcRplusDovetail_7742:HG2_PB_SVrefine2PB10Xhap12_2849:HG2_PB_SVrefine2Falcon2Bionano_1834:HG2_PB_SVrefine2Falcon1plusDovetail_8353:HG2_Ill_SVrefine2DISCOVARplusDovetail_9058:HG2_Ill_250bpfermikitraw_5458;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5458:HG2_Ill_SVrefine2DISCOVARplusDovetail_9058:HG2_PB_SVrefine2Falcon1plusDovetail_8353:HG2_PB_SVrefine2Falcon2Bionano_1834:HG2_PB_SVrefine2PB10Xhap12_2849:HG2_PB_SVrefine2PBcRplusDovetail_7742:HG2_PB_assemblyticsPBcR_17968:HG3_Ill_250bpfermikitraw_5297:HG3_Ill_SVrefine2DISCOVARDovetail_3048:HG3_PB_SVrefine2Falcon1Dovetail_2436:HG3_PB_SVrefine2PBcRDovetail_1822:HG4_Ill_SVrefine2DISCOVARDovetail_3027:HG4_PB_SVrefine2Falcon1Dovetail_2370:HG4_PB_SVrefine2PBcRDovetail_2013;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0945455;ClusterMaxSizeDiff=0.0888889;ClusterMaxEditDist=0.19697;PBcalls=18;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=130;DistBack=22167;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=130;REFWIDENED=3:181870922-181871051;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3861.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:2:29:1:19:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr3	182298994	HG2_Ill_GATKHCSBGrefine_2631	T	TGGAAATATATAACTATGTAGAGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTTAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_2631:HG2_PB_pbsv_3870:HG4_PB_HySA_5854:HG4_PB_pbsv_3906:HG2_Ill_breakscan11_3392:HG2_PB_PB10Xdip_20218:HG2_PB_SVrefine2PB10Xhap12_2850:HG2_PB_HySA_7396:HG4_Ill_MetaSV_3556:HG2_PB_assemblyticsfalcon_18576:HG4_Ill_GATKHCSBGrefine_2739;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2631:HG4_Ill_GATKHCSBGrefine_2739;NumExactMatchSVs=2;ClusterMaxShiftDist=0.198718;ClusterMaxSizeDiff=0.198718;ClusterMaxEditDist=0.269231;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=324;DistBack=27508;DistForward=72222;DistMin=27508;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=3:182298995-182299013;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3862.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:50:37:0|1:48:0:1:30:./.:0:0:0:0:0/1:34:8:./.:4:36:.:.:.
chr3	183032750	HG2_Ill_GATKHCSBGrefine_2633	A	ATTTCACTCTTGTTGCCCAGGCTGGAGTACAATGGTACGATCTCAGCTCATTGCAACCTCCGCCTCCCAGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGTCCGGGTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCGTGTTGGTCAGGCTGGTCTCAAACTCCCGACTTCAGGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGTATTACAGGTGTGAGCCACTGCACCTGGCCAGTATCTCTTTTTTTCTAATATAAACCATTTCTCTCTTTAAGCCATTTTTGGATGAGAAAGAGGAAATATATAACTCTAGTTTAATGATTTTGGTATTCTTGCTTCTAAGCTACAAGATAACGAACAAAGAAATCAGATTTGAATTAGGACAATAATCAGTAATCACAAAAAGGCCTTAAGAAATTCTCTGTATTTTTTTGGTTTGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTTTCGAGATGGAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2018:HG3_Ill_GATKHCSBGrefine_2636:HG4_PB_pbsv_3913:HG2_Ill_GATKHCSBGrefine_2633:HG2_PB_PB10Xdip_20229:HG3_PB_pbsv_3803:HG4_PB_HySA_5877:HG2_PB_pbsv_3877:HG4_Ill_MetaSV_3557:HG2_PB_SVrefine2PB10Xhap12_2857:HG2_PB_SVrefine2PBcRplusDovetail_7747:HG2_10X_SVrefine210Xhap12_2909:HG4_PB_SVrefine2Falcon1Dovetail_2377:HG3_Ill_SVrefine2DISCOVARDovetail_3052:HG2_Ill_SVrefine2DISCOVARplusDovetail_9063:HG3_PB_SVrefine2PBcRDovetail_1825:HG3_PB_SVrefine2Falcon1Dovetail_2443:HG2_PB_SVrefine2Falcon1plusDovetail_8359:HG4_Ill_SVrefine2DISCOVARDovetail_3035:HG2_10X_SVrefine210Xhap12_2908:HG2_PB_SVrefine2Falcon2Bionano_1839;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2633:HG3_Ill_GATKHCSBGrefine_2636;NumExactMatchSVs=2;ClusterMaxShiftDist=0.145059;ClusterMaxSizeDiff=0.143246;ClusterMaxEditDist=0.312329;PBcalls=13;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=525;DistBack=-1;DistForward=27707;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=303;REFWIDENED=3:183032701-183033003;PctSeqSimilarity=0.9879;PctSizeSimilarity=0.981;PctRecOverlap=0.9581;SizeDiff=10;StartDistance=17;EndDistance=17;GTMatch=0;TruScore=97;MatchId=3863.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:34:0:22:./.:0:0:0:0:1/1:0:26:./.:4:58:.:.:.
chr3	183190822	HG2_Ill_GATKHCSBGrefine_2634	T	TTGTTGCCCAGACTGGAGTGCAGTGGCGCGATCTCGGCTCACCGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGAGTGCATCACCATGCCCAGCTAATTTTTTGTATTATTAGCAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCGGCCTCGGCCTCCCAAAGTGTTGGGATTACAGGTGTGAGCCACTGTACTCGGCCTCTTCTTCTCATTTTCTTTGTAATGTAACCTTTTCCTAGCCCTCCATCTTCATGTTTCTAAATAGCACTGCTTTGCTAGAAAAAGAGTGAACCACCCTCTTTTGTGTACCTACAGATTTCCCCCAGAAGGAAAGTTAAAGGACGAGGGGAAGGGACCTGAGGTGGCAATTGCTGCTATCAGCCATTTGATTCTTTTACACTAGGAAACAAGATCCAGGCAGTGGTACTGATTTAGGCTGCATTTGTTAAAGAGGCTGCTTTATGGAACTGAACATTTAAGGATGGTTAGAGACGTGGAAAACAATGATAGAACACTGGCCTAACTCAGAAGGCAGAACACTTTTTCGTAAAGGGCCAGATAGTAAACACTTTAGCCTCTAGGGGTCATAGAGTCTCATCACAATGACTCAGTTCTGCTCTTTTTTGTTTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTGAGGCAGAGTCTTGCTC	20	PASS	ClusterIDs=HG2_Ill_Spiral_277:HG3_PB_pbsv_3804:HG3_PB_assemblyticsfalcon_18494:HG2_PB_pbsv_3878:HG2_PB_HySA_7420:HG2_PB_PB10Xdip_20230:HG2_PB_SVrefine2PB10Xhap12_2858:HG3_PB_SVrefine2Falcon1Dovetail_2445:HG4_Ill_MetaSV_3558:HG4_Ill_GATKHCSBGrefine_2748:HG3_Ill_MetaSV_3578:HG3_Ill_GATKHCSBGrefine_2637:HG2_Ill_MetaSV_3414:HG2_Ill_GATKHCSBGrefine_2634:HG3_PB_SVrefine2PBcRDovetail_1826:HG4_PB_SVrefine2Falcon1Dovetail_2378:HG3_Ill_SVrefine2DISCOVARDovetail_3053:HG2_PB_SVrefine2PBcRplusDovetail_7748:HG2_10X_SVrefine210Xhap12_2910:HG3_PB_SVrefine2Falcon1Dovetail_2444:HG4_Ill_Spiral_326:HG3_Ill_Spiral_4297;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2634:HG2_Ill_MetaSV_3414:HG3_Ill_GATKHCSBGrefine_2637:HG3_Ill_MetaSV_3578:HG4_Ill_GATKHCSBGrefine_2748:HG4_Ill_MetaSV_3558;NumExactMatchSVs=6;ClusterMaxShiftDist=0.217609;ClusterMaxSizeDiff=0.216178;ClusterMaxEditDist=0.284677;PBcalls=11;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=741;DistBack=-227;DistForward=41638;DistMin=-227;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=262;REFWIDENED=3:183190788-183191049;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3864.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:46:38:0|1:41:5:3:28:./.:0:0:0:0:0/1:30:10:0/1:14:62:.:.:.
chr3	183378856	HG2_Ill_SVrefine2DISCOVARplusDovetail_9065	A	AAAAAAAAAAAATTAAAAAAAGCCCTAAGGCTTATGGCTGGTATAAGTGTCTAATGGGGTCATTTATATTGGTGAATTCACCATGATCCAGTGATTCCTCTAGGCTCAGGAACTTTTTCTTTTTATACAGTAAGAATAGATCAGACTATTAGAGGCAGATTTAACATTAAGTATGACAGACCAATTAACTCATCTCCTAGTCTGTATATATCTGTTTGCAATAAGAAATGGAATTATCAAGGAGGCTACCTATTTTAAGTCAACCTGCCCAGTAACATTCTCTAACTATGGACAAGTCACTACATGGGAAGCCAAAGTTTTCAAAGGTCATTTGGCAAGCAAGGAATTCAAACAGAGTTAGTAGACCTTTAGAACTGAAGTCCTCTCAGCTAGTATAGCTTGAGGAAGTCTCACCCACCATCAAAATATTCTTGCCAAAAAACCAATACTATTCAAGGTAGCTTAGCTTAGATTGTCTCTCCCTTAGATAATAATCTGAATGGGCACAGCAAATGTTTGCCTCGGTGATTATCATCTCTTTGATTCATTTCTTTATTCATTTACTTACGGCTTCTACAGCTGACCCATCCCCTTTTTTGATACATAGTTTCTTTTAGATAAATTAGTACATTGAGTTTGGTAACTGTCATATCTTACAGACTAGAGAACCATTCTGTCTCTTTAAGGCTTAAAGTCTCATATCTCTATTTTAGTTCATTATTTTGATTTGATGGTTTGATTTTCAGGTATTTCTGGGTTTTAGAATGGTGAACAGACTATATCACTAGTATCTCTCCCTTCTCCTTCCCAATTTCATACTACATGGAAACATTTCCTTTCCTATTGTATATATTTTAAAAATATATATTCAGATATTCTTATTAGCCAGGATCACTTTTCAACCCTTTTCTTTTGGGCACTCCCCATGTCTAGCATATTTGGCATTAATTACAAGTAGGTCAGTTATTTCAGCCAGCAATTCCTCTATTTCACCTTTCAAGATATTTAAACTGAATCCAATAATTATTTATTACATTTTAAATTGTGGTTTAGAATATCCTGTGGATTTTTTTTTTTTCCCCTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGCACCTTCCACCTCCCGGGTTCAAGCACTTCTGCCTCAGCCTCCAGAGTAGCTGGGATAACAGGTGCCCACCACCACACCTGGCTAATTTTTGTATTCTTAGTAGAGACGGGGGTTTCACCGTGTTGGCCAGGCTGGTCTTGAACTCTTGACCTCATGATCTGCCCGCCTGGGCCTCCCAAAGTACTGGGATTACAGGTGTGAGCCACCACGCCCGGCCCTATCCTGTGGATTTATGATTGTTTTATCTTTCACGTAAATCAAAGAACATGAACTTTTAATTTGATATTTTCTCAAATTAATGATAAAAGAAGATTTTTTTTTAGATGTATTACCATTGTAAAAAGGATAATTTGGTCATCACACTTTCTTAAAAGCAAGTGGAGAGAATTAATCCTAAAGTAACAAATATTTGTTATTGCATCATAGCAAAAAATCAGATTTCTTTCTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCAGGCTGGAGTGCAGTGGCACGATCTCGACTCACTGCAACCTCCTCCTCCTGGGTTCAAGAAATCCTCTTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCACGCCACCACACTCAGCTAATTTTTGTATTTTTAGTAGAAATGGGGTTTCACCAGGTTGGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCGCCCACCTTGGCCTCCCAAAGTGCCGGGATTACAGGTATGAGCCACTGCGCCCGGCCTGGATTTTTTACTTTAAAGAATTAATGAAGCTGGGCATGGTGACTCATTCGGTAATCTTCGCGCTTTGGGAGTCCAAGGCAGGAGAATGGCTTGAGTGCATGAGCTTGAGACCAGCCTGGGCAACATTGTGACCCTGTCTCTAC	20	PASS	ClusterIDs=HG2_Ill_Spiral_278:HG2_PB_pbsv_3881:HG2_PB_PB10Xdip_20233:HG2_PB_SVrefine2PB10Xhap12_2860:HG3_PB_HySA_6083:HG2_PB_HySA_7424:HG3_PB_pbsv_3805:HG2_PB_assemblyticsfalcon_18592:HG2_PB_assemblyticsPBcR_17987:HG2_PB_SVrefine2Falcon2Bionano_1840:HG3_Ill_SVrefine2DISCOVARDovetail_3054:HG3_PB_SVrefine2PBcRDovetail_1827:HG2_PB_SVrefine2PBcRplusDovetail_7750:HG2_Ill_SVrefine2DISCOVARplusDovetail_9065:HG2_10X_SVrefine210Xhap12_2913:HG2_PB_SVrefine2Falcon1plusDovetail_8361:HG2_10X_SVrefine210Xhap12_2912:HG3_Ill_Spiral_4298;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2913:HG2_Ill_SVrefine2DISCOVARplusDovetail_9065:HG2_PB_SVrefine2PBcRplusDovetail_7750;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0466945;ClusterMaxSizeDiff=0.0466945;ClusterMaxEditDist=0.142132;PBcalls=12;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=2015;DistBack=65;DistForward=23744;DistMin=65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=3:183378857-183378875;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.999;PctRecOverlap=0.9916;SizeDiff=2;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=99;MatchId=3865.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:59:0|1:26:0:0:36:./.:0:0:0:0:0/1:16:12:0/1:74:147:.:3563:.
chr3	183402601	HG2_Ill_SVrefine2DISCOVARplusDovetail_9066	T	TTTTTTTCTTTTTTTGAGACGGAGTCTCACTCTGTCACCCAGGCTGGAGAGCAGTGGTGCAGTCTTGGCTTACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCGTGCTTCAGCCTCCTGAGTACCTGGGACTACAGGTGCATGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCATCATGTTGGTCAGGTTGGTCTCAAACTCCTGACCTTGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCCCCGCGCCTGGCCTAAAAATTTGTTTAATTAACACAAGGTAACCTATAACATTTGCAAACTAACGTTCTTTTGATTTGGTTCTCACATTGACGGGACTTAATTTATTTCAAAGAAAATTTTTTAAAAAGCATAGAGTTATCTTTTTTTTTTTTTTGAGACAGGGTCTCACTGTGTCATCCATGGGCTGGAGTGCGGTGGCACCATCATTGCTAACTGTAGCCTGAACTCTTGGGGTCCCAAGTAGCTGGAATTGCAGGTGTGTGCCACCACGCCTGGCTAATTATTTTTTGTAGAGACAAGCTTATATTGCCCAGGCTGGTCTCCAACTCCTGGCCTTAAGTGATGCTTCTGCCTCCCAAAGCACTGGGATTACAGACATGAGACCCCACATCCAGCCTAGGGTTATTATTTACTGGAGAGGCAATGTCTGAATTTGCATTGGCAAAAGTATATTTTTGAAAATACATAAAAACATTATAGAAGCACATAATATGCTTAGATTTTATGCTTAGAGTTTTGCCATCAAAATAAAATGGCAATTAGGGTTTTCATCTTGTTGTTATTATTTTTGAGACAAGGTCTCACTCCTGTCACCCAGGCTGGAGTGCCGTGGTACAATCATGGCTCACTGCAGCCTCAACTTGCCAGGCTCAAGCAATCCTCCCACCTCAGCCACACAAGTACTTGGGACTACAGGTGAGCGCCGCCACACCTGGCCTTTATTTTTATTTATTTATTCTTTTTGTAGAGATGGGGTCTCGCCATGTTGTCCAGGCTGGTCTCAAACTCCCGGGCTCCAGTGATCTGCCCGCTTCAGCCTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACTGTGCCCAGCCCTTAGAGTGGTTTTTAATGTTACAGGTATTTTCATTTGACTTAATGCCTCTGTAGACATCTGTAAAATGCACGGGCTTCATCAGACCTGATTCCAACCAGTTCTCCGCTGTAGAGCCATTTACCTCTCTCAGTCTCACTCTTTTGGTTCTAGGAAATGTAACCATAATACTTACCTTACAGGCTTCTTGTAAGGAGATGAGATTATGCAGTGTATACTGAAGGGTGAATATAGTTCTCACACACAAGAGCAGCACATAACTTCATGCAGCTGGCCCAGGACAAAAATGCAAAGTGCAAAGGCAGGGAAGGAATTGAAAGAATTAAAAGTATTCATTGGATCATATTTGAGAAACCTTGGACAATGGATAAATAGGAGCCTCTTGGTTTTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7751:HG2_PB_pbsv_3882:HG2_PB_HySA_7425:HG2_PB_PB10Xdip_20234:HG2_PB_SVrefine2Falcon1plusDovetail_8362:HG3_PB_SVrefine2PBcRDovetail_1828:HG2_PB_SVrefine2PB10Xhap12_2861:HG3_Ill_SVrefine2DISCOVARDovetail_3055:HG2_Ill_SVrefine2DISCOVARplusDovetail_9066:HG2_10X_SVrefine210Xhap12_2914:HG2_PB_SVrefine2Falcon2Bionano_1841;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2914:HG2_Ill_SVrefine2DISCOVARplusDovetail_9066:HG3_Ill_SVrefine2DISCOVARDovetail_3055;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0731392;ClusterMaxSizeDiff=0.0724919;ClusterMaxEditDist=0.154889;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=1535;DistBack=23744;DistForward=288;DistMin=288;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=288;REFWIDENED=3:183402602-183402889;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9993;PctRecOverlap=0.9037;SizeDiff=-1;StartDistance=-147;EndDistance=-147;GTMatch=0;TruScore=96;MatchId=3866.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:38:0|1:25:0:0:21:./.:0:0:0:0:0/1:16:24:0/1:55:123:.:3563:.
chr3	183587783	HG2_Ill_SVrefine2DISCOVARplusDovetail_9070	G	GGGCCGGGCACAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGGCCAATATGGTGAAACCTCGTCTCCACTAAAAATACAAAAATTAGCCAGGTGTGGTGGTGCACACCTGTAGAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCGCGTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGACTGTGCCACTGCATTCCAGCCTGGGAGACAAAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAGTCTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2381:HG2_PB_PB10Xdip_20236:HG2_PB_pbsv_3884:HG4_PB_pbsv_3916:HG3_PB_pbsv_3808:HG4_Ill_MetaSV_3560:HG4_Ill_GATKHCSBGrefine_2752:HG3_Ill_GATKHCSBGrefine_2642:HG2_Ill_MetaSV_3417:HG2_Ill_GATKHCSBGrefine_2638:HG3_Ill_MetaSV_3579:HG2_PB_HySA_7429:HG4_PB_HySA_5881:HG3_Ill_SVrefine2DISCOVARDovetail_3057:HG3_PB_SVrefine2PBcRDovetail_1830:HG4_Ill_SVrefine2DISCOVARDovetail_3040:HG2_PB_SVrefine2PBcRplusDovetail_7753:HG2_PB_SVrefine2PB10Xhap12_2864:HG2_PB_SVrefine2Falcon2Bionano_1843:HG2_PB_SVrefine2Falcon1plusDovetail_8363:HG2_Ill_SVrefine2DISCOVARplusDovetail_9070:HG2_10X_SVrefine210Xhap12_2916:HG3_PB_SVrefine2Falcon1Dovetail_2447;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2916:HG2_Ill_SVrefine2DISCOVARplusDovetail_9070:HG2_PB_SVrefine2Falcon1plusDovetail_8363:HG2_PB_SVrefine2Falcon2Bionano_1843:HG2_PB_SVrefine2PB10Xhap12_2864:HG2_PB_SVrefine2PBcRplusDovetail_7753:HG4_Ill_SVrefine2DISCOVARDovetail_3040;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0794913;ClusterMaxSizeDiff=0.073132;ClusterMaxEditDist=0.244444;PBcalls=13;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=303;DistBack=11086;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=295;REFWIDENED=3:183587784-183588078;PctSeqSimilarity=0.9595;PctSizeSimilarity=1;PctRecOverlap=0.2904;SizeDiff=0;StartDistance=-215;EndDistance=-215;GTMatch=0;TruScore=74;MatchId=3867.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:./.:0:0:0:0:./.:0:0:0:0:1/1:0:15:1/1:2:31:.:.:.
chr3	183953456	HG4_PB_HySA_5884	T	TCCCACACAACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACAACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTCCCCACACACAGCCATGTGTACCTCCAGAGTCCCCACACACAGCCATGTGTACCTCCAGAGTCCCACACACAGCCATGTGTACCTCCAGAGTC	10	PASS	ClusterIDs=HG2_PB_HySA_7431:HG4_PB_pbsv_3919:HG4_PB_HySA_5884:HG4_PB_pbsv_3918:HG4_PB_SVrefine2Falcon1Dovetail_2383:HG2_PB_pbsv_3885:HG3_PB_SVrefine2Falcon1Dovetail_2448:HG4_PB_SVrefine2PBcRDovetail_2022;NumClusterSVs=8;ExactMatchIDs=HG4_PB_HySA_5884;NumExactMatchSVs=1;ClusterMaxShiftDist=0.217606;ClusterMaxSizeDiff=0.215628;ClusterMaxEditDist=0.277778;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=517;DistBack=-103;DistForward=16;DistMin=-103;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=352;REFWIDENED=3:183953409-183953760;PctSeqSimilarity=0.9731;PctSizeSimilarity=0.9574;PctRecOverlap=0.7893;SizeDiff=-23;StartDistance=-102;EndDistance=-102;GTMatch=0;TruScore=90;MatchId=3868.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:43:0|1:35:1:1:29:./.:0:0:0:0:0/0:22:0:0/1:10:5:.:.:.
chr3	184430797	HG2_PB_SVrefine2PBcRplusDovetail_7760	T	CTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCC	20	PASS	ClusterIDs=HG3_PB_pbsv_3814:HG2_PB_SVrefine2Falcon1plusDovetail_8370:HG2_PB_assemblyticsfalcon_18603:HG4_PB_assemblyticsfalcon_18201:HG4_PB_SVrefine2Falcon1Dovetail_2390:HG4_PB_SVrefine2PBcRDovetail_2026:HG2_PB_SVrefine2PB10Xhap12_2872:HG2_PB_SVrefine2Falcon2Bionano_1848:HG3_PB_SVrefine2Falcon1Dovetail_2454:HG3_PB_SVrefine2PBcRDovetail_1836:HG2_PB_assemblyticsPBcR_18003:HG2_PB_SVrefine2PBcRplusDovetail_7760:HG2_Ill_SVrefine2DISCOVARplusDovetail_9079:HG4_Ill_SVrefine2DISCOVARDovetail_3050:HG4_PB_pbsv_3925:HG2_PB_pbsv_3892:HG2_PB_PB10Xdip_20242;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7760:HG2_PB_assemblyticsPBcR_18003:HG3_PB_SVrefine2PBcRDovetail_1836;NumExactMatchSVs=3;ClusterMaxShiftDist=0.149068;ClusterMaxSizeDiff=0.149068;ClusterMaxEditDist=0.171975;PBcalls=15;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=172;DistBack=-1;DistForward=8910;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=156;REFWIDENED=3:184430714-184430869;PctSeqSimilarity=0.9913;PctSizeSimilarity=0.9942;PctRecOverlap=0.9884;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3869.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:70:./.:0:4:1:4:./.:0:0:0:0:1/1:1:15:./.:.:.:.:.:.
chr3	185595591	HG4_Ill_250bpfermikitraw_5569	G	GCTCTGCCTCCCAGGCTGGAGTGCAATGGTGCCATCTCAGCTCACTGCAAC	20	PASS	ClusterIDs=HG2_PB_HySA_7456:HG4_Ill_FB_3688:HG2_Ill_FB_3625:HG4_Ill_svaba_5098:HG3_Ill_svaba_5075:HG2_Ill_svaba_4983:HG2_PB_PB10Xdip_20257:HG2_PB_pbsv_3902:HG3_PB_HySA_6110:HG3_PB_pbsv_3822:HG4_PB_assemblyticsfalcon_18211:HG4_Ill_scalpel_3792:HG4_Ill_SVrefine2DISCOVARDovetail_3057:HG4_Ill_Krunchall_5822:HG4_Ill_GATKHC_6639:HG4_Ill_GATKHCSBGrefine_2761:HG4_Ill_250bpfermikitraw_5569:HG4_Ill_150bpfermikitraw_5303:HG4_CG_vcfBeta_2671:HG3_PB_assemblyticsfalcon_18522:HG3_Ill_scalpel_3968:HG3_Ill_GATKHC_6579:HG3_Ill_GATKHCSBGrefine_2655:HG3_CG_vcfBeta_2287:HG2_PB_assemblyticsfalcon_18614:HG2_PB_SVrefine2PBcRplusDovetail_7766:HG2_PB_SVrefine2PB10Xhap12_2879:HG2_Ill_scalpel_3865:HG2_Ill_SVrefine2DISCOVARplusDovetail_9087:HG2_Ill_Krunchall_5604:HG2_Ill_GATKHC_6527:HG2_Ill_GATKHCSBGrefine_2649:HG2_Ill_150bpfermikitraw_5092:HG2_CG_vcfBeta_2368:HG2_10X_SVrefine210Xhap12_2930:HG3_PB_SVrefine2PBcRDovetail_1844:HG4_PB_HySA_5911;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2930:HG2_CG_vcfBeta_2368:HG2_Ill_150bpfermikitraw_5092:HG2_Ill_GATKHCSBGrefine_2649:HG2_Ill_GATKHC_6527:HG2_Ill_Krunchall_5604:HG2_Ill_SVrefine2DISCOVARplusDovetail_9087:HG2_Ill_scalpel_3865:HG2_PB_SVrefine2PB10Xhap12_2879:HG2_PB_SVrefine2PBcRplusDovetail_7766:HG2_PB_assemblyticsfalcon_18614:HG3_CG_vcfBeta_2287:HG3_Ill_GATKHCSBGrefine_2655:HG3_Ill_GATKHC_6579:HG3_Ill_scalpel_3968:HG3_PB_assemblyticsfalcon_18522:HG4_CG_vcfBeta_2671:HG4_Ill_150bpfermikitraw_5303:HG4_Ill_250bpfermikitraw_5569:HG2_Ill_FB_3625:HG4_Ill_FB_3688:HG4_PB_assemblyticsfalcon_18211:HG4_Ill_scalpel_3792:HG4_Ill_SVrefine2DISCOVARDovetail_3057:HG4_Ill_Krunchall_5822:HG4_Ill_GATKHC_6639:HG4_Ill_GATKHCSBGrefine_2761;NumExactMatchSVs=27;ClusterMaxShiftDist=0.173077;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.272727;PBcalls=12;Illcalls=21;TenXcalls=1;CGcalls=3;PBexactcalls=5;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=3;HG2count=16;HG3count=9;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=50;DistBack=38248;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=63;REFWIDENED=3:185595592-185595654;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3871.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:39:1/1:4:13:1:12:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr3	186072992	HG2_Ill_GATKHCSBGrefine_2655	C	CCAACACCACTATCGTCAACTCCCCACACAACTACCATCACCGCTACCACCACCAACACCACTATCGTCAACTCCCCACACAACTACCATCACCGCTACCACCAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2397:HG2_PB_PB10Xdip_20258:HG3_PB_HySA_6114:HG2_PB_pbsv_3907:HG4_PB_HySA_5914:HG3_PB_assemblyticsfalcon_18527:HG2_PB_HySA_7463:HG4_Ill_GATKHCSBGrefine_2767:HG4_PB_pbsv_3939:HG3_Ill_GATKHCSBGrefine_2659:HG2_PB_SVrefine2PB10Xhap12_2880:HG2_PB_SVrefine2Falcon2Bionano_1855:HG2_Ill_GATKHCSBGrefine_2655:HG4_Ill_SVrefine2DISCOVARDovetail_3058:HG2_PB_SVrefine2Falcon1plusDovetail_8379:HG2_Ill_SVrefine2DISCOVARplusDovetail_9089;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2655:HG2_PB_SVrefine2Falcon2Bionano_1855:HG2_PB_SVrefine2PB10Xhap12_2880:HG3_Ill_GATKHCSBGrefine_2659:HG4_Ill_GATKHCSBGrefine_2767;NumExactMatchSVs=5;ClusterMaxShiftDist=0.138249;ClusterMaxSizeDiff=0.119816;ClusterMaxEditDist=0.242152;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=104;DistBack=-1;DistForward=19;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=75;REFWIDENED=3:186072984-186073058;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3872.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:40:1|0:7:35:14:2:./.:0:0:0:0:0/1:16:11:./.:.:.:.:.:.
chr3	186123508	HG3_PB_HySA_6115	T	TTTATTTATTTAGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCCGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_pbsv_3827:HG2_PB_pbsv_3908:HG2_PB_HySA_7465:HG2_PB_assemblyticsPBcR_18021:HG3_PB_HySA_6115:HG3_Ill_GATKHCSBGrefine_2660:HG3_Ill_MetaSV_3586:HG2_PB_SVrefine2PB10Xhap12_2881:HG2_PB_SVrefine2Falcon2Bionano_1856:HG2_PB_SVrefine2PBcRplusDovetail_7768:HG2_PB_PB10Xdip_20259;NumClusterSVs=11;ExactMatchIDs=HG3_PB_HySA_6115;NumExactMatchSVs=1;ClusterMaxShiftDist=0.181518;ClusterMaxSizeDiff=0.181518;ClusterMaxEditDist=0.196339;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=-1;DistForward=9579;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:186123509-186123524;PctSeqSimilarity=0.9921;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3873.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:46:./.:9:25:14:11:./.:0:0:0:0:0/1:26:8:0/1:7:18:.:.:.
chr3	186473956	HG4_PB_HySA_5916	T	TCCTTTGCTGATCCTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCGCCCGCGCCACCGCGCCCGGCTAATTTTTGTGTATTTTTAGTAAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACTCGCCTCGGCCCTCCCAAAGTGCTGGGATTTACAGGCGTGAGCCACCCGCGCCCGG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3424:HG2_PB_pbsv_3910:HG2_PB_assemblyticsfalcon_18625:HG4_PB_pbsv_3941:HG2_Ill_GATKHCSBGrefine_2656:HG4_PB_assemblyticsfalcon_18221:HG4_PB_SVrefine2PBcRDovetail_2036:HG2_PB_SVrefine2Falcon2Bionano_1858:HG4_PB_SVrefine2Falcon1Dovetail_2400:HG2_PB_SVrefine2Falcon1plusDovetail_8381:HG4_PB_HySA_5916:HG2_PB_HySA_7471;NumClusterSVs=12;ExactMatchIDs=HG4_PB_HySA_5916;NumExactMatchSVs=1;ClusterMaxShiftDist=0.158126;ClusterMaxSizeDiff=0.158126;ClusterMaxEditDist=0.234637;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=348;DistBack=4791;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=3:186473957-186473968;PctSeqSimilarity=0.9826;PctSizeSimilarity=0.9713;PctRecOverlap=0.9713;SizeDiff=10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3875.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:1|0:3:21:22:3:./.:0:0:0:0:0/1:29:9:0/1:8:32:.:.:.
chr3	186700640	HG2_PB_PB10Xdip_20275	T	TATATATTTTTTTTTTTTTTTTTTATTTTTATTGATCATTCTTGGTGTTTCTCGCAGAGGGGATTTGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGCGTTTGTGTCCCTGGGTACTTAAGATTAGGAGTGGTGATGACTCTCAACGAGCATGCTGCCCTCAAGCATCTGTTCAACAAAGCACATCTTGCACCGCCCTTAATCCATCTAACCCTGAGTGGACACAGCACATGTCTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCAGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCCGGCAGAAGTGCCCCTCACCTCCCAGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCGCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGCTGTTCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACGTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCCCCGGACGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGGGCGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGTTGACCCCCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGTTGCCAGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGAGCGGCCGGGCAGAGACACTCCTCACCTCCCAGACAGGGTTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGTGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTTCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCACACTGGGCAGCCAGGCAGAGGGGCTCCTCATATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCAGCTAATAAATTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7772:HG2_PB_pbsv_3913:HG2_PB_assemblyticsPBcR_18028:HG2_PB_HySA_7474:HG2_PB_PB10Xdip_20275:HG2_PB_SVrefine2PB10Xhap12_2884:HG4_PB_pbsv_3943;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_20275;NumExactMatchSVs=1;ClusterMaxShiftDist=0.251682;ClusterMaxSizeDiff=0.251682;ClusterMaxEditDist=0.324624;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2208;DistBack=2;DistForward=1887;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:186700634-186700649;PctSeqSimilarity=0.9082;PctSizeSimilarity=0.8316;PctRecOverlap=0.832;SizeDiff=-447;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=85;MatchId=3876.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:42:0|1:43:2:2:23:./.:0:0:0:0:0/1:39:14:0/1:73:217:.:2704:.
chr3	187101501	HG2_PB_SVrefine2Falcon2Bionano_1861	A	AACATTTGAGAAGCTAGGTCTATACAAGCAATTTAATAGCTTGGTGTGTAATAAGCTATATAAAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20276:HG2_PB_HySA_7478:HG3_PB_pbsv_3834:HG4_PB_HySA_5921:HG4_PB_pbsv_3947:HG3_PB_HySA_6125:HG4_PB_SVrefine2PBcRDovetail_2039:HG4_Ill_svaba_5114:HG4_Ill_manta_964:HG4_Ill_SVrefine2DISCOVARDovetail_3064:HG4_Ill_Krunchall_5842:HG4_Ill_GATKHC_6656:HG4_Ill_GATKHCSBGrefine_2771:HG4_Ill_250bpfermikitraw_5586:HG4_Ill_150bpfermikitraw_5319:HG3_Ill_svaba_5093:HG3_Ill_Krunchall_5537:HG3_Ill_GATKHC_6603:HG3_Ill_GATKHCSBGrefine_2665:HG3_Ill_250bpfermikitraw_5345:HG2_PB_SVrefine2PBcRplusDovetail_7774:HG2_PB_SVrefine2PB10Xhap12_2886:HG2_PB_SVrefine2Falcon2Bionano_1861:HG2_PB_SVrefine2Falcon1plusDovetail_8385:HG2_Ill_svaba_4999:HG2_Ill_manta_1111:HG2_Ill_SVrefine2DISCOVARplusDovetail_9097:HG2_Ill_Krunchall_5627:HG2_Ill_GATKHC_6548:HG2_Ill_GATKHCSBGrefine_2661:HG2_Ill_250bpfermikitraw_5506:HG2_Ill_150bpfermikitraw_5106:HG2_10X_SVrefine210Xhap12_2940;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2940:HG2_Ill_150bpfermikitraw_5106:HG2_Ill_250bpfermikitraw_5506:HG2_Ill_GATKHCSBGrefine_2661:HG2_Ill_GATKHC_6548:HG2_Ill_Krunchall_5627:HG2_Ill_SVrefine2DISCOVARplusDovetail_9097:HG2_Ill_manta_1111:HG2_Ill_svaba_4999:HG2_PB_SVrefine2Falcon1plusDovetail_8385:HG2_PB_SVrefine2Falcon2Bionano_1861:HG2_PB_SVrefine2PB10Xhap12_2886:HG2_PB_SVrefine2PBcRplusDovetail_7774:HG3_Ill_250bpfermikitraw_5345:HG3_Ill_GATKHCSBGrefine_2665:HG3_Ill_GATKHC_6603:HG3_Ill_Krunchall_5537:HG3_Ill_svaba_5093:HG4_Ill_150bpfermikitraw_5319:HG4_Ill_250bpfermikitraw_5586:HG4_Ill_GATKHCSBGrefine_2771:HG4_Ill_GATKHC_6656:HG4_Ill_Krunchall_5842:HG4_Ill_SVrefine2DISCOVARDovetail_3064:HG4_Ill_manta_964:HG4_Ill_svaba_5114:HG4_PB_SVrefine2PBcRDovetail_2039;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0757576;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.212121;PBcalls=11;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=64;DistBack=-64;DistForward=-1;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=3:187101502-187101567;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3877.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:55:./.:1:3:2:16:./.:0:0:0:0:1/1:1:63:./.:.:.:.:.:.
chr3	187435823	HG2_Ill_250bpfermikitraw_5512	A	AACTCCCCAGAAGCATGGCTATCTGTGAAGCGTAAGGGTCCTTCTAATGGCAG	20	PASS	ClusterIDs=HG4_PB_HySA_5922:HG3_PB_HySA_6128:HG3_PB_pbsv_3837:HG2_PB_HySA_7480:HG2_PB_PB10Xdip_20314:HG2_PB_assemblyticsfalcon_18637:HG2_PB_assemblyticsPBcR_18040:HG4_Ill_Krunchall_5846:HG4_Ill_250bpfermikitraw_5590:HG3_Ill_250bpfermikitraw_5349:HG2_Ill_250bpfermikitraw_5512;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5512:HG3_Ill_250bpfermikitraw_5349:HG4_Ill_250bpfermikitraw_5590:HG4_Ill_Krunchall_5846;NumExactMatchSVs=4;ClusterMaxShiftDist=0.11215;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.224299;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=3692;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=157;REFWIDENED=3:187435797-187435953;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3878.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:0:12:1:12:./.:0:0:0:0:0/1:14:26:./.:.:.:.:.:.
chr3	188354722	HG3_PB_SVrefine2Falcon1Dovetail_2466	AC	TAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAAAGCAGAGCCTCTCCTCCTCCAAAGGAACGCAGTCCTCACCAGCAACGGAACAAAGCTGGAGGAGAATGACTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAACCGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAAACTTCCCCAATCTAGCAAGGCAGGCCAATGTTCAGATTCAGGAAATACAGAGAACACCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAGCCCATCAGACTACAGCGGATCTCTCGGCAGAAACCCTACAAGCAGAAGAAGTGGGGGCCAATATTCAACATTCTTAAAGAAAGAATTTTCAACCCAGAATTCATATCCAGCCAAACTAAGCTTCAAAGTGAAGGAGAATAAAATACCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCAGAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAAGCGCAAATGGAAAGGAACAACTGGTACCAGCCGCTGCAAATATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAAATGAGCAAAATAACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACACATATTAACTTTAATGTAAATGGACTAAATGCTCCAATTAAAAGACACAGACTGGCAAATCTGGATAAAGAGTCAAGATCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTAAAACAAAATCCAACAATTCAAAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCTGAGTGACTACAAAGAGACTTAGACTCCCACACATTAATAAGGGAGACTTTAACACCCACTGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2891:HG2_PB_pbsv_3921:HG2_PB_HySA_7493:HG2_PB_SVrefine2PBcRplusDovetail_7778:HG2_PB_SVrefine2Falcon1plusDovetail_8388:HG3_PB_SVrefine2Falcon1Dovetail_2466:HG4_PB_SVrefine2Falcon1Dovetail_2407;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2466;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0421804;ClusterMaxEditDist=0.139806;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1515;DistBack=23629;DistForward=20322;DistMin=20322;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:188354724-188354721;PctSeqSimilarity=0.9797;PctSizeSimilarity=0.9889;PctRecOverlap=0.9889;SizeDiff=-17;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=3879.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:27:1:0:26:./.:0:0:0:0:0/1:21:4:0/1:55:99:.:1595:.
chr3	188883211	HG4_Ill_manta_966	T	TGGTTCTCAAACTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_5943:HG4_PB_pbsv_3956:HG2_PB_pbsv_3924:HG2_PB_HySA_7510:HG4_PB_SVrefine2PBcRDovetail_2041:HG4_Ill_manta_966:HG4_Ill_MetaSV_3575:HG4_Ill_GATKHCSBGrefine_2774:HG2_Ill_MetaSV_3432:HG2_Ill_GATKHCSBGrefine_2665:HG4_PB_SVrefine2Falcon1Dovetail_2410:HG3_PB_SVrefine2Falcon1Dovetail_2467:HG2_PB_SVrefine2Falcon2Bionano_1865:HG2_PB_SVrefine2PB10Xhap12_2894:HG2_PB_HySA_7509:HG2_Ill_breakscan11_3393;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2665:HG2_Ill_MetaSV_3432:HG4_Ill_GATKHCSBGrefine_2774:HG4_Ill_MetaSV_3575:HG4_Ill_manta_966:HG4_PB_SVrefine2PBcRDovetail_2041;NumExactMatchSVs=6;ClusterMaxShiftDist=0.111455;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.192878;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=322;DistBack=-12;DistForward=-1;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=3:188883212-188883226;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3880.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:37:1|0:5:27:24:3:./.:0:0:0:0:0/1:27:8:./.:6:51:.:.:.
chr3	189746459	HG2_PB_SVrefine2PB10Xhap12_2899	G	GATGGAGACACTCTATGTTTTACAATGATTTTATTATTTTAATAATTGTTTGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_20321:HG4_PB_pbsv_3962:HG4_Ill_250bpfermikitraw_5621:HG3_PB_HySA_6160:HG2_PB_HySA_7519:HG2_PB_pbsv_3930:HG3_PB_assemblyticsfalcon_18576:HG4_PB_HySA_5956:HG3_Ill_SVrefine2DISCOVARDovetail_3095:HG3_Ill_250bpfermikitraw_5381:HG2_PB_SVrefine2PBcRplusDovetail_7786:HG2_PB_SVrefine2PB10Xhap12_2899:HG2_PB_SVrefine2Falcon2Bionano_1869:HG2_PB_SVrefine2Falcon1plusDovetail_8393:HG2_Ill_SVrefine2DISCOVARplusDovetail_9107:HG2_Ill_250bpfermikitraw_5548;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5548:HG2_Ill_SVrefine2DISCOVARplusDovetail_9107:HG2_PB_SVrefine2Falcon1plusDovetail_8393:HG2_PB_SVrefine2Falcon2Bionano_1869:HG2_PB_SVrefine2PB10Xhap12_2899:HG2_PB_SVrefine2PBcRplusDovetail_7786:HG3_Ill_250bpfermikitraw_5381:HG3_Ill_SVrefine2DISCOVARDovetail_3095:HG3_PB_assemblyticsfalcon_18576:HG4_Ill_250bpfermikitraw_5621;NumExactMatchSVs=10;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.285714;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=-52;DistForward=51;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=158;REFWIDENED=3:189746460-189746617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3881.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:52:1/1:1:22:5:25:./.:0:0:0:0:0/1:11:36:./.:.:.:.:.:.
chr3	189959380	HG2_PB_SVrefine2PBcRplusDovetail_7787	CCTTTACAACAGCTGCA	AGAAACAATGGACTTAAACTATACCCTACAAAAAATAGACTTAACAGATATTTACAGAACATTGTACCCAACAACTGCAGAATATACATTCTATTCATCAGCACATGGGACATTCTCTAAGACAGACAATATAGGCCACAAAACCACTCTCAATAAATTTAAGAAGATCAAAGTTACATCAAGTATTCTCTCAGAACCTAGTAGAATAAAATTGGAACTTAACTCCAAATGGAACCCTCAAAACTATACAAATACATGGAAATAAAATAATCTGCTCCTGAATGATCTCTGGGTCAACAATGAAATCAGGAAGGAAATTTGAAAATTATTTGAAATGAATGATAATAGTGACAGACCCTATCAAAACCTCTAGGATACAGCAAAAGTGGTGCTAAGAGGAAAATTTATGGCACTAAATGCCTACATCAAAAAGTCTGAAAGAGCATAAATAGACAATCTAAGCTCACACCTCAAGGAACTAGATAAACAAGAAACAAACCCAAACCCAGCAGAAGAAAATGAATAACAAAGATCAGAGCAGAACTAAGTGAAATTGAAACCAAAAAGATATATGAAACAAAAAGGTGGTTCTTTGCAAAGATGAGTAAAATCAATAGACCATTAGTGAGGTTAACCAAGAAAAGAAGAAAGAAGATCCAAATAAGTCCAATTAGAAACAAAATGGGAGATATTACTACTGATAATGCAGAAAAAGATCATTCAAAGCTACTATGAATACCCTTATGTGCACAAACTAGAAAACCTAGAGGAGATTTATAAATTCCTGCAAGTATACAACCCTCCTAGATTCAACCAGGAAGAAACAGAAACTCTGAACAGACCAATAACAAGCAACAAGATTGAAACAGTAATAAAGAAAATTGCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATTGCCAGCAAAAAAAGTCCAAGACCAGATGGATTCACAGCTGAATTCTATTGGACATTCAAAGAAAAATTGATACCAATTCCACTGAAACTATTCCAAAAGATAGAGAAAGAGGGAATCTTCCCTAAATCATTCTATGAAGCCAGCATTACCCTAACAACAAAACCAGGAAAGGCTATAACAAAAAAAGAAAACTACAAATCAATGTCCCTGATTAACAGAGATGCAAAAATCTTCAACAAAATACTAGCTAGCTGAATCCAGCAGCATATCAAAAATATAACACTCCATGATCAAGTGGGCTTAATACCAGGGATACAGGGTTGGTTTAACATATGAAAGTCAAAAAAGTGATACACTACATAAACAGAATTAAAAACAAAAATGATATGATCATCTCAATAGATGCAGAAAAGGCATCTGACAAAATCCAGCATCACTTTATGATTACAACCCTCAGCAAAATTGGCATAAAAGAGACATAACTTAGAGTAATAAAAGCCACCTATGACAAACCCACAGTCAACATTATACTGAATGGGGAAAAGTTGAAAACATTCCCCCTGAGAACTGGAACAAGACAAGGATGCCCACTTTCACCTCTTCTAGTCAACATAGTACTGGAAGCCCTAGCCAGAGCAATCAAACAAAAGAAAGAAATAAAGGGCCTTCAAATCAGTGAGGAAGAAGTTGTTGTCCACCAATGATATGATTGTATACTTAAAACACCCTAAAGACTCACGTAAAAAGCTCCTGGATCTGATAAATGAATTCAGTAGTTTCAGAATACAAAATCAATGTACATAAGTCAGTAGCCCTGCTATACACCAACAGTGACCAACCTGAAAATCAAATCAAGAACTCAACCCCCTTTACAACAGCTGCAAATACAATACAATGCAATACAATACAATAC	20	PASS	ClusterIDs=HG3_PB_pbsv_3849:HG2_PB_pbsv_3932:HG2_10X_SVrefine210Xhap12_2948:HG2_PB_SVrefine2Falcon2Bionano_1870:HG2_PB_assemblyticsPBcR_18072:HG2_PB_SVrefine2PBcRplusDovetail_7787:HG3_PB_SVrefine2PBcRDovetail_1855:HG3_PB_SVrefine2Falcon1Dovetail_2474:HG2_PB_SVrefine2PB10Xhap12_2900:HG2_PB_PB10Xdip_20323;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7787:HG2_PB_assemblyticsPBcR_18072;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0767601;ClusterMaxSizeDiff=0.0767601;ClusterMaxEditDist=0.199311;PBcalls=9;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=2111;DistBack=3670;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=3:189959397-189959379;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9967;PctRecOverlap=0.9934;SizeDiff=-7;StartDistance=2;EndDistance=18;GTMatch=0;TruScore=99;MatchId=3883.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:39:0|1:36:1:1:31:./.:0:0:0:0:0/1:31:16:0/1:82:218:.:1990:.
chr3	190191319	HG4_Ill_GATKHCSBGrefine_2782	A	AGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCTGGCCGCCCCTACTGGGAAGT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_5556:HG4_PB_pbsv_3967:HG2_PB_HySA_7527:HG2_PB_pbsv_3937:HG4_Ill_GATKHC_6708:HG4_Ill_GATKHCSBGrefine_2782:HG2_Ill_GATKHC_6606:HG2_Ill_GATKHCSBGrefine_2672;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5556:HG4_Ill_GATKHC_6708:HG4_Ill_GATKHCSBGrefine_2782:HG2_Ill_GATKHC_6606:HG2_Ill_GATKHCSBGrefine_2672;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0387097;ClusterMaxSizeDiff=0.0387097;ClusterMaxEditDist=0.219355;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=78;DistBack=23;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=117;REFWIDENED=3:190191247-190191363;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3885.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:24:3:3:25:./.:0:0:0:0:0/1:14:17:./.:.:.:.:.:.
chr3	190833572	HG3_PB_SVrefine2Falcon1Dovetail_2481	C	CTGCTAAATCATCACCTGGCACACAATTGTGGGATGTAGAAGCATAAATACTCAGCACTCCATACCCTCCTGAACCTTGCTTTCTTGTATTTCCATTGGTCAATTCAATAAGAAGCAGAGGTCAAGGAAGCCGCAGGAGACATAGTTGGTTGATGTCAGCTTCTGAGGGCATATGGCAGGACCAAGAAAAGTAGAGAATGGATTTGGAATAACACATCCTTTTATGAAAACTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATACATACATATATATAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2049:HG2_PB_pbsv_3945:HG3_PB_assemblyticsfalcon_18589:HG3_PB_SVrefine2Falcon1Dovetail_2481:HG4_PB_assemblyticsfalcon_18268:HG4_PB_SVrefine2Falcon1Dovetail_2419:HG2_Ill_GATKHCSBGrefine_2679:HG2_PB_HySA_7534:HG4_PB_HySA_5965:HG2_PB_SVrefine2Falcon2Bionano_1877:HG2_PB_SVrefine2Falcon1plusDovetail_8399:HG4_Ill_SVrefine2DISCOVARDovetail_3084;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2481:HG3_PB_assemblyticsfalcon_18589;NumExactMatchSVs=2;ClusterMaxShiftDist=0.185606;ClusterMaxSizeDiff=0.185255;ClusterMaxEditDist=0.257576;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=287;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=3:190833573-190833572;PctSeqSimilarity=0.9757;PctSizeSimilarity=0.9965;PctRecOverlap=0.9931;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3886.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:73:1|0:6:30:29:4:./.:0:0:0:0:0/1:27:14:./.:.:.:.:.:.
chr3	191108200	HG4_Ill_GATKHC_6718	C	CTTGGATCTTGTGTAAGAAAGAATTCTAGGGAAATCCATAGAGTAAAGTGGTAGAAGCAAGTTTATTAAGAAAGTAAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_3947:HG2_PB_PB10Xdip_20330:HG2_Ill_breakscan11_3395:HG4_PB_assemblyticsfalcon_18271:HG4_Ill_svaba_5158:HG4_Ill_Krunchall_5897:HG4_Ill_GATKHC_6718:HG4_Ill_GATKHCSBGrefine_2789:HG4_Ill_250bpfermikitraw_5638:HG4_Ill_150bpfermikitraw_5366:HG3_PB_assemblyticsfalcon_18592:HG3_Ill_svaba_5136:HG3_Ill_Spiral_4375:HG3_Ill_Krunchall_5586:HG3_Ill_250bpfermikitraw_5390:HG2_PB_assemblyticsfalcon_18678:HG2_PB_assemblyticsPBcR_18088:HG2_Ill_svaba_5045:HG2_Ill_manta_1121:HG2_Ill_SpiralSDKrefine_11767:HG2_Ill_Krunchall_5680:HG2_Ill_GATKHC_6614:HG2_Ill_GATKHCSBGrefine_2680:HG2_Ill_250bpfermikitraw_5565:HG2_Ill_150bpfermikitraw_5150:HG3_Ill_manta_904:HG3_Ill_GATKHC_6658:HG3_Ill_GATKHCSBGrefine_2678:HG2_PB_HySA_7538:HG3_PB_HySA_6168;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5150:HG2_Ill_250bpfermikitraw_5565:HG2_Ill_GATKHCSBGrefine_2680:HG2_Ill_GATKHC_6614:HG2_Ill_Krunchall_5680:HG2_Ill_SpiralSDKrefine_11767:HG2_Ill_manta_1121:HG2_Ill_svaba_5045:HG2_PB_assemblyticsPBcR_18088:HG2_PB_assemblyticsfalcon_18678:HG3_Ill_250bpfermikitraw_5390:HG3_Ill_Krunchall_5586:HG3_Ill_Spiral_4375:HG3_Ill_svaba_5136:HG3_PB_assemblyticsfalcon_18592:HG4_Ill_150bpfermikitraw_5366:HG4_Ill_250bpfermikitraw_5638:HG4_Ill_GATKHCSBGrefine_2789:HG4_Ill_GATKHC_6718:HG4_Ill_Krunchall_5897:HG4_Ill_svaba_5158:HG4_PB_assemblyticsfalcon_18271;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0506329;ClusterMaxSizeDiff=0.05;ClusterMaxEditDist=0.17284;PBcalls=8;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=78;DistBack=0;DistForward=72678;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:191108199-191108201;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3887.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:94:./.:0:1:0:2:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr3	193229449	HG2_PB_SVrefine2Falcon2Bionano_1885	C	CCCTTCATTCTCACACTAGCCCCATTTTACAAGTGGTGAAATTGAGGTCCTAAAAAGTTAGGTAACAAACCTAAAGTACTAGGACAAGAAATCAAAACGTTTGACT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1885:HG3_PB_HySA_6179:HG2_PB_PB10Xdip_20339:HG2_PB_pbsv_3957:HG2_PB_HySA_7549:HG2_PB_SVrefine2PB10Xhap12_2919;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1885:HG2_PB_SVrefine2PB10Xhap12_2919;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0651163;ClusterMaxSizeDiff=0.0651163;ClusterMaxEditDist=0.193548;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=105;DistBack=7639;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=211;REFWIDENED=3:193229450-193229660;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9905;PctRecOverlap=0.8095;SizeDiff=1;StartDistance=-20;EndDistance=-20;GTMatch=0;TruScore=93;MatchId=3888.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:43:1|0:2:38:24:0:./.:0:0:0:0:0/1:34:12:./.:.:.:.:.:.
chr3	194096163	HG2_PB_SVrefine2PBcRplusDovetail_7805	A	AAGAGGAGAAGAAAGGAGAGAGGAGGGGAGGGGAGGGGTTAGGGGAGGCCGGAGGGGAGGGGGGGGTGAGGGGAGGCTGCAGGGGAGGGGAGGGGAGGGAAGGAGAGGGTAAGGGGAGGGAGGAGAGGGGAGGGGAGGAGAGGGGAGGGGAGGAGAGGGGAGGAGAGGGGAAGAGAGGGGAGGAGAGGGGAGGAGAGGGGAGGAGAGGGGAGAAGGGGGGAGGGGAGGGGAGGGGAAGAGAGGGGAGGAGAGGGGAGGAGAGGGGAGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7805:HG2_PB_HySA_7561:HG3_PB_HySA_6189:HG3_PB_pbsv_3871:HG2_Ill_breakscan11_3396:HG4_PB_HySA_5999:HG2_PB_SVrefine2Falcon2Bionano_1888:HG4_PB_pbsv_3996:HG3_PB_SVrefine2Falcon1Dovetail_2491:HG2_PB_pbsv_3963:HG2_PB_SVrefine2PB10Xhap12_2922:HG2_PB_SVrefine2Falcon1plusDovetail_8412:HG4_PB_SVrefine2Falcon1Dovetail_2430:HG4_PB_SVrefine2PBcRDovetail_2058:HG3_PB_SVrefine2PBcRDovetail_1869;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7805:HG3_PB_SVrefine2PBcRDovetail_1869;NumExactMatchSVs=2;ClusterMaxShiftDist=0.152753;ClusterMaxSizeDiff=0.152753;ClusterMaxEditDist=0.286713;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=267;DistBack=23010;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=57;REFWIDENED=3:194096164-194096220;PctSeqSimilarity=0.9896;PctSizeSimilarity=1;PctRecOverlap=0.9213;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=1;TruScore=97;MatchId=3890.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:1/1:0:30:0:19:./.:0:0:0:0:./.:0:5:./.:.:.:.:.:.
chr3	194141847	HG2_PB_SVrefine2Falcon2Bionano_1890	A	ATATATATATATATATATAGTATATATATATATATAGTTTATATATATATAGTTTATATATATAAACTATATATATATAAAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2494:HG4_PB_HySA_6000:HG3_PB_pbsv_3873:HG3_PB_HySA_6191:HG2_PB_HySA_7562:HG3_Ill_manta_909:HG2_Ill_manta_1127:HG3_Ill_GATKHC_6679:HG3_Ill_GATKHCSBGrefine_2685:HG4_Ill_GATKHC_6744:HG2_Ill_GATKHC_6641:HG4_PB_pbsv_3998:HG4_PB_SVrefine2PBcRDovetail_2060:HG2_PB_SVrefine2PB10Xhap12_2926:HG2_PB_SVrefine2Falcon2Bionano_1890:HG2_Ill_SVrefine2DISCOVARplusDovetail_9124:HG3_Ill_SVrefine2DISCOVARDovetail_3116:HG2_PB_SVrefine2PBcRplusDovetail_7808:HG2_PB_pbsv_3966;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9124:HG2_PB_SVrefine2Falcon2Bionano_1890:HG2_PB_SVrefine2PB10Xhap12_2926:HG4_PB_SVrefine2PBcRDovetail_2060;NumExactMatchSVs=4;ClusterMaxShiftDist=0.227545;ClusterMaxSizeDiff=0.203593;ClusterMaxEditDist=0.275449;PBcalls=11;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=81;DistBack=-30;DistForward=3;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=3:194141848-194141902;PctSeqSimilarity=0.9757;PctSizeSimilarity=0.9529;PctRecOverlap=0.7529;SizeDiff=-4;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=89;MatchId=3891.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:63:1/1:2:27:1:18:./.:0:0:0:0:0/1:7:17:./.:.:.:.:.:.
chr3	194543292	HG3_PB_pbsv_3877	G	GTGGCTGATATGGTTGACCAATGGCCTCTGGGAGAAGGCTATGGGCAGCAGGACCACTGTCCCGGCTTGTTGGGACGGGAAGCAAGGAGGTCCAATCTGTCTCCCTTCAACACTGGCCGTCCTGGGGGGACAAGGAAGATGCCCAGAGTGGTGGCAGGC	20	PASS	ClusterIDs=HG3_PB_pbsv_3877:HG2_10X_SVrefine210Xhap12_2975;NumClusterSVs=2;ExactMatchIDs=HG3_PB_pbsv_3877;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0365854;ClusterMaxSizeDiff=0.0243902;ClusterMaxEditDist=0.164634;PBcalls=1;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=158;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=3:194543293-194543294;PctSeqSimilarity=0.9157;PctSizeSimilarity=0.9875;PctRecOverlap=0.9565;SizeDiff=-2;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=95;MatchId=3892.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:47:0|1:39:5:0:28:./.:0:0:0:0:0/1:17:4:./.:.:.:.:.:.
chr3	194768517	HG2_PB_SVrefine2PB10Xhap12_2934	T	TGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCTCCCGGCC	20	PASS	ClusterIDs=HG4_PB_pbsv_4009:HG2_PB_pbsv_3975:HG4_PB_assemblyticsfalcon_18311:HG4_PB_SVrefine2Falcon1Dovetail_2440:HG2_PB_HySA_7582:HG3_PB_SVrefine2Falcon1Dovetail_2504:HG3_PB_pbsv_3880:HG2_PB_SVrefine2PBcRplusDovetail_7814:HG2_PB_SVrefine2PB10Xhap12_2934:HG2_PB_SVrefine2Falcon2Bionano_1897:HG2_PB_SVrefine2Falcon1plusDovetail_8421:HG4_PB_SVrefine2PBcRDovetail_2068:HG2_10X_SVrefine210Xhap12_2977:HG4_PB_HySA_6016:HG2_PB_PB10Xdip_20353;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2934:HG2_PB_SVrefine2PBcRplusDovetail_7814;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0848485;ClusterMaxSizeDiff=0.0848485;ClusterMaxEditDist=0.204978;PBcalls=14;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=3:194768518-194768524;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3893.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:0:15:0:21:./.:0:0:0:0:1/1:0:13:1/1:3:54:.:.:.
chr3	195472395	HG2_PB_SVrefine2Falcon1plusDovetail_8440	T	TATATATATATATATTCTTTATATATATATATATATATATTCTTTATATATATATATATATATATATATATTCTTTATATATATATATATATTATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_4028:HG2_PB_assemblyticsfalcon_18729:HG2_PB_SVrefine2Falcon1plusDovetail_8440:HG3_Ill_GATKHC_6711:HG2_Ill_GATKHC_6686:HG3_PB_pbsv_3898:HG2_PB_pbsv_3990;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8440:HG2_PB_assemblyticsfalcon_18729;NumExactMatchSVs=2;ClusterMaxShiftDist=0.173077;ClusterMaxSizeDiff=0.173077;ClusterMaxEditDist=0.221154;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=97;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=3:195472358-195472395;PctSeqSimilarity=0.9949;PctSizeSimilarity=0.9898;PctRecOverlap=0.9798;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3895.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:28:./.:20:26:15:0:./.:0:0:0:0:0/1:39:8:./.:.:.:.:.:.
chr3	195487317	HG2_PB_SVrefine2Falcon1plusDovetail_8441	C	CTGGAGTGCAGGGAGCTGGGAAGGCGTCCAGCGCTAGGATGGAGTGGAGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGAGTGGAGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGATGGAGGGGCTGGGAAGGGGTCCAGCGCTAGGATGGATGGAGGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGATGGAGGGGGCTTGGAAGGCGTCCAGCGCTAGGATGGAGTGGAGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGAGTGGAGGGCTGGGAAGGGTCCAGCACTAGGATGGAGTGGAGGGGCTGGGAAGGGGTCCAGCACTAGGATGGAGTGGAGGGGCTGGGAAGGCGTCCAGCACTAGGATGGAGTGGAGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGAGTGGAGGGGGCTGGGAAGGCGTCCAGCACTAGGATGGATGGAGGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGATGGAGGGGGCTGGGAAGGGGTCCAGCACTAGGATGGAGTGGAGGGGGCTGGGAAGGCTTCCAGCGCTAGGATGGAGTGGAGGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGATGGAGGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGATGGAGGGGGCTGGGAAGGCGTCCAGCGCTAGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8441:HG4_PB_pbsv_4029:HG2_PB_pbsv_3991:HG2_PB_SVrefine2PBcRplusDovetail_7826:HG3_PB_SVrefine2Falcon1Dovetail_2529:HG4_PB_SVrefine2Falcon1Dovetail_2457;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8441;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0325203;ClusterMaxSizeDiff=0.0251293;ClusterMaxEditDist=0.168745;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=667;DistBack=527;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=226;REFWIDENED=3:195487318-195487543;PctSeqSimilarity=0.9929;PctSizeSimilarity=0.9926;PctRecOverlap=0.948;SizeDiff=-5;StartDistance=-32;EndDistance=-32;GTMatch=0;TruScore=97;MatchId=3896.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:37:0|1:30:1:0:19:./.:0:0:0:0:0/1:18:8:0/1:6:26:.:8830:.
chr3	195823763	HG4_Ill_Cortex_2548	A	ACTCCCCTGAACTCCTGGGAAGACCCAGCCCAACAGCCAGTCCACACGAACC	20	PASS	ClusterIDs=HG2_Ill_svaba_5115:HG3_PB_pbsv_3918:HG2_PB_SVrefine2PBcRplusDovetail_7839:HG2_PB_pbsv_4015:HG4_PB_HySA_6044:HG2_Ill_breakscan11_3398:HG3_PB_SVrefine2PBcRDovetail_1889:HG2_PB_PB10Xdip_20492:HG4_PB_SVrefine2Falcon1Dovetail_2463:HG4_Ill_manta_990:HG4_Ill_SVrefine2DISCOVARDovetail_3114:HG4_Ill_Krunchall_5967:HG4_Ill_GATKHC_6817:HG4_Ill_Cortex_2548:HG4_Ill_250bpfermikitraw_5708:HG4_Ill_150bpfermikitraw_5433:HG3_PB_SVrefine2Falcon1Dovetail_2536:HG3_Ill_manta_914:HG3_Ill_Spiral_4430:HG3_Ill_SVrefine2DISCOVARDovetail_3128:HG3_Ill_Krunchall_5648:HG3_Ill_GATKHC_6732:HG3_Ill_Cortex_2557:HG3_Ill_250bpfermikitraw_5454:HG3_Ill_150bpfermikitraw_5281:HG2_PB_SVrefine2PBcRplusDovetail_7838:HG2_PB_SVrefine2PB10Xhap12_2965:HG2_PB_SVrefine2Falcon2Bionano_1918:HG2_PB_SVrefine2Falcon1plusDovetail_8456:HG2_Ill_manta_1136:HG2_Ill_SpiralSDKrefine_11817:HG2_Ill_SVrefine2DISCOVARplusDovetail_9140:HG2_Ill_Krunchall_5746:HG2_Ill_GATKHC_6697:HG2_Ill_Cortex_6000:HG2_Ill_250bpfermikitraw_5633:HG2_Ill_150bpfermikitraw_5212:HG2_10X_SVrefine210Xhap12_2988:HG2_PB_HySA_7605:HG4_Ill_svaba_5233:HG3_Ill_svaba_5204;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2988:HG2_Ill_150bpfermikitraw_5212:HG2_Ill_250bpfermikitraw_5633:HG2_Ill_Cortex_6000:HG2_Ill_GATKHC_6697:HG2_Ill_Krunchall_5746:HG2_Ill_SVrefine2DISCOVARplusDovetail_9140:HG2_Ill_SpiralSDKrefine_11817:HG2_Ill_manta_1136:HG2_PB_SVrefine2Falcon1plusDovetail_8456:HG2_PB_SVrefine2Falcon2Bionano_1918:HG2_PB_SVrefine2PB10Xhap12_2965:HG2_PB_SVrefine2PBcRplusDovetail_7838:HG3_Ill_150bpfermikitraw_5281:HG3_Ill_250bpfermikitraw_5454:HG3_Ill_Cortex_2557:HG3_Ill_GATKHC_6732:HG3_Ill_Krunchall_5648:HG3_Ill_SVrefine2DISCOVARDovetail_3128:HG3_Ill_Spiral_4430:HG3_Ill_manta_914:HG3_PB_SVrefine2Falcon1Dovetail_2536:HG4_Ill_150bpfermikitraw_5433:HG4_Ill_250bpfermikitraw_5708:HG4_Ill_Cortex_2548:HG4_Ill_GATKHC_6817:HG4_Ill_Krunchall_5967:HG4_Ill_SVrefine2DISCOVARDovetail_3114:HG4_Ill_manta_990:HG4_PB_SVrefine2Falcon1Dovetail_2463;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.277778;PBcalls=13;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=51;DistBack=52700;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=61;REFWIDENED=3:195823764-195823824;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3897.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:37:1/1:0:16:2:15:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr3	195840135	HG2_Ill_GATKHC_6702	T	TATATATATATATATATATATATATATATATATATATATATATATATATATATATTGA	20	PASS	ClusterIDs=HG2_PB_pbsv_4019:HG2_Ill_GATKHC_6702:HG4_PB_HySA_6047;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_GATKHC_6702;NumExactMatchSVs=1;ClusterMaxShiftDist=0.123894;ClusterMaxSizeDiff=0.123894;ClusterMaxEditDist=0.247788;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=0;DistForward=16319;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=3:195840120-195840135;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3898.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:19:0|1:21:1:4:17:./.:0:0:0:0:0/1:33:5:./.:.:.:.:.:.
chr3	195891812	HG4_PB_SVrefine2PBcRDovetail_2082	A	ATGTGTATGGGGTGGTTGTGGTGTGTGTCTGTTGTTTGGTGTGTGTGTGTGTGTGTGTGTGTCTGGGGGGTTGTGTGCTATATGATGTGGGGAATGAACGTTGACTCAGTGTGTGTGGTGTGTGTCTGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8459:HG2_PB_HySA_7610:HG2_PB_pbsv_4021:HG3_Ill_250bpfermikitraw_5457:HG3_PB_pbsv_3920:HG3_Ill_150bpfermikitraw_5284:HG2_Ill_250bpfermikitraw_5634:HG2_Ill_150bpfermikitraw_5214:HG2_PB_PB10Xdip_20498:HG3_PB_SVrefine2PBcRDovetail_1890:HG3_PB_SVrefine2Falcon1Dovetail_2538:HG4_PB_SVrefine2PBcRDovetail_2082:HG4_PB_SVrefine2Falcon1Dovetail_2467:HG3_Ill_SVrefine2DISCOVARDovetail_3129:HG2_PB_SVrefine2PBcRplusDovetail_7842:HG2_PB_SVrefine2PB10Xhap12_2970:HG2_PB_SVrefine2Falcon2Bionano_1922;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8459:HG4_PB_SVrefine2PBcRDovetail_2082:HG4_PB_SVrefine2Falcon1Dovetail_2467:HG3_Ill_SVrefine2DISCOVARDovetail_3129:HG2_PB_SVrefine2PBcRplusDovetail_7842:HG2_PB_SVrefine2PB10Xhap12_2970:HG2_PB_SVrefine2Falcon2Bionano_1922;NumExactMatchSVs=7;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.269091;PBcalls=12;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=128;DistBack=19368;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=271;REFWIDENED=3:195891813-195892083;PctSeqSimilarity=0.9693;PctSizeSimilarity=0.9844;PctRecOverlap=0.5969;SizeDiff=2;StartDistance=-51;EndDistance=-51;GTMatch=0;TruScore=85;MatchId=3899.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:1/1:1:26:0:8:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr3	196538064	HG3_PB_SVrefine2Falcon1Dovetail_2542	T	TCCTTCCTCCCTTCCCTCCCTTCCTTCCCTTCCCTACCCCCTCCTTCCCTCCTTCCTTCCCTTCCTACCCTCCCTTCCCTCCTTCCTTCCTCCTTCCTTCCTCCCTTCCTTCCTCCCTTCCTTCCTTCCTTCTTCCTCCTTCCTCCCTTCCTTCCTTCCCTACCCTCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTCCCTTCCTTCTTCCTTCCCTACCCTCCCTTCCCTTCCTTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCTTCCCTACCCTCCCTTCCCTCCCTCCCTTCCCTCCCTTCCTTCCCTCCTTCCTTCCTCCCTTCCTTCCTCCCTCCTCCCTTCCCTCCTTCCTTCCCTCCCTTCCTTCCCTTCCTCCTCTTCCCTCCTTCCTTCCCTTCCTTCCTTCCCTACCCTCCTTCCCTCCTTCCTTCCTTCCTCCCTCCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCCTCCCTTCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCCTTCCTTCCCTACCCTCCCTTCCTCCCTTCCTTCCCTTCCCTCCCTCCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCTTCCTTCCCTTCCCTCCCTCCCTTCCTCCCTTCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCTTCCTCCCTCCTTCCCTCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCTCCCTTCTTTTCCCTTCCTTCCCTACCCTCCTTCCTTCCTTCTTCCCTTCCTCCCTCTCCTTCCCTCCCTTCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCCTCCCTCCCTTCCCTCCCTTCCTTCCCTCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCCTCCTCCCTTCCCTCCCTTCCTTCCCTCCCTTTTCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCTTCCTTCCCTACCTCCCTTCCTCCCTTCCTTCCCTTCCCTCCCTCCTTCCTCCCTTCTTCCCTCCCTTCCTTCCTTCCCTCCCTCCTTCCCTCCCTTCCTTCCCCTCCCTTCCTTCCCTCCCTTCCTTCCTCTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCTCTTCCTTCCCTTCCTCCTTCCCTACCTCCCTTCCCTCCCTTCTTCCCTTCCTCCCTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCCTTCCTCCTCCCTTCCCTCCTTCCTTCCCTTCCTCCTTCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCTTCCTTCCCTTCCCTTCCTTCCTACCCCTCCCTTCCCTCCCTTCCTTCCCTTCCCTCCCTCCCTTCCCTCCCTTCCTTCCCTCCCTCCTTCCCTCCCTTCCTTCCCTCCCTCCCTCCCTTCCCTCCCCTTCCTTCCCTCCCTCCTTCCCTCCCTTCCTTCCCTCCTTCTTCCTTCCTCCCTCCCTTCCCTCCCTTCCTTCCCTCCCTCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCTACCCTCCCTTCCTTCCTTCCTTCCCTTCCCTCCCTCCTTCCCTCCCTTCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCTTCCCTCCTCCTTCCCTCCCTTCCTTCCTCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCTTCCCTCCCTCCCTTCCCTCCTTCCTTCCCTCCCTTCCTTCCCTCCCTCCTTCTCTCCTTCCTTCCCTTCCTTCCTACCCTCCTTTCCCTCCTTCCTTCCCTTCCTTCCTTCCTTCCCTCCCTTCCTTCCCTCCTTCCTTCCCTCCCTTTCCCTTCCCCCTTCCTTCCCTTCCCTCCTCCTTCCCTCCCTTCCTTCCCTTCCCTTCCTTCCCTACCCTCCCTTCCCTCCCTTCCTTCGCTTCCCTTCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCTTCCCTTCCTTCCCTACCCTCCTTCTCCCTTCCTTCCCTTCCCTTCCTTCCTTCCCTCCCTTCCTTCCTCTCCTTCTTCCCTCCCTTCCTCTCCCTTCCTTCCCTTCCCTCCCTCCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCTTCGCCCTCCCTCCCTTCCCTCCCTTCCTTCCCTTCCCTTCCTTCCCTACCCTCCCTTCCCTCCCTTCTTCCCTTCCCTTCCTTCCTTCCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCCTCCTTCCTTCCCTTCCCTCCCTCCCTTCCTCCCTCCCTTCCCTCCCTTCCTTCCTCCCTTCCTTCCCTCCTTCCTTCCCTTCCCTTCCCTCCCTTCCCTCCCTTCCTTCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCCTTCCTTCCTTCCCTCCTTTCCTTCCCTCCCTTCCTTCCCTCCTTCCTTCCCTCCCTTCCTTCCTCCCTTCCTTCCTTCCCTCCCTCCCTTCCTCCCTTCCTTCCTTCCCTTCCTTCCCTACCTCCTTCCCTCCCTTCCTTCCCTCCTCCCTCCCTTCCTCCCTTCCTTCCCTTCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCCTCCCTCCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCTCCCTCCCTTCCCTCCCTTCCTTCCCTTCCCTTCCTTCCCTACCCTCCTTCCCTCCCTTCCTTCCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCTTCCTCCTTCTTCCCTCCCTTCCTTCCTTCCCTCCCTTCCTTCCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCTCCTTCCTTCCTTCCCTCCCTCCCTTCCTACCCTCCCTTCCTCCTCTTCCTTCCCTCCTTCTTCCTCCCTTCCTTCCCTCCCTCCTTCCTCCCTTCCTTCCCTCCTTCCTTCCCTCCTTCCTTCCCTTCCCTCCCTTCCTTCCCTTCCCTTCCCTTCCTTCCTCCCTCTGTTACCTCCCTTCCCTCCCTCTTCCCTTCCCTCCCTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTTCCCTCCTCCCTTCCCTCCTTCCCTTCCCTCCCTTCCTTCCCTTCCCTCCCTCCCTTCCTCCTTCCTTCCCTTCCCTTCCTTCCTACCCTCCCTTCCCTCCCTTCCTTCCCTTCCCTCCCTTCCTTCCCTCCCTTCCTTCCCTCCTTCCTTCCCTTCCCTCCCTCCTTCCTTCCCTTTCCTCCCTCCCCTTTCCCTCTCCTCCCTCCCTCCCTTCCTTC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2542:HG3_PB_pbsv_3927:HG2_PB_SVrefine2PB10Xhap12_2978:HG2_PB_assemblyticsPBcR_18169:HG2_PB_SVrefine2PBcRplusDovetail_7848:HG2_PB_SVrefine2Falcon1plusDovetail_8464:HG2_PB_SVrefine2PB10Xhap12_2977;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2542;NumExactMatchSVs=1;ClusterMaxShiftDist=0.216842;ClusterMaxSizeDiff=0.216842;ClusterMaxEditDist=0.239341;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=3479;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=80;REFWIDENED=3:196538063-196538142;PctSeqSimilarity=0.8469;PctSizeSimilarity=0.7459;PctRecOverlap=0.7459;SizeDiff=884;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=77;MatchId=3901.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:20:0:17:./.:0:0:0:0:0/1:2:13:0/1:22:107:.:3492:.
chr3	197454846	HG4_PB_SVrefine2Falcon1Dovetail_2484	C	CGCTGGGCACAGCGGTACATGCCTGTAGTCCCAGCTCCTCAGGAGGCTGAAGCAGGAGGACTGCCTGACCTAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1940:HG4_PB_pbsv_4076:HG3_PB_HySA_6260:HG2_PB_HySA_7652:HG4_PB_SVrefine2Falcon1Dovetail_2484:HG3_Ill_SVrefine2DISCOVARDovetail_3143;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1940:HG4_PB_SVrefine2Falcon1Dovetail_2484:HG3_Ill_SVrefine2DISCOVARDovetail_3143;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0547945;ClusterMaxSizeDiff=0.0547945;ClusterMaxEditDist=0.0972222;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=72;DistBack=20156;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=212;REFWIDENED=3:197454847-197455058;PctSeqSimilarity=0.9886;PctSizeSimilarity=1;PctRecOverlap=0.7945;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=92;MatchId=3902.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:20:1|0:1:17:38:3:./.:0:0:0:0:./.:47:5:./.:.:.:.:.:.
chr3	197574549	HG4_Ill_GATKHC_6855	G	GTGCAAAAGTAATTGCAGTTTCTCCCATCACTTTCAATGGCAGAAACTGCAATTACTTT	20	PASS	ClusterIDs=HG3_PB_pbsv_3950:HG4_PB_HySA_6085:HG4_PB_pbsv_4078:HG4_PB_SVrefine2PBcRDovetail_2092:HG2_PB_pbsv_4053:HG2_Ill_breakscan11_3401:HG4_PB_assemblyticsfalcon_18400:HG2_PB_assemblyticsPBcR_18190:HG3_PB_assemblyticsfalcon_18709:HG2_PB_PB10Xdip_20557:HG4_PB_SVrefine2Falcon1Dovetail_2485:HG4_Ill_svaba_5261:HG4_Ill_manta_997:HG4_Ill_SVrefine2DISCOVARDovetail_3134:HG4_Ill_Krunchall_5991:HG4_Ill_GATKHC_6855:HG4_Ill_GATKHCSBGrefine_2838:HG4_Ill_250bpfermikitraw_5730:HG4_Ill_150bpfermikitraw_5457:HG3_Ill_svaba_5233:HG3_Ill_manta_919:HG3_Ill_Spiral_4454:HG3_Ill_SVrefine2DISCOVARDovetail_3145:HG3_Ill_Krunchall_5675:HG3_Ill_GATKHC_6766:HG3_Ill_GATKHCSBGrefine_2716:HG3_Ill_250bpfermikitraw_5482:HG3_Ill_150bpfermikitraw_5308:HG2_PB_SVrefine2PBcRplusDovetail_7862:HG2_PB_SVrefine2PB10Xhap12_2990:HG2_Ill_svaba_5147:HG2_Ill_SpiralSDKrefine_11839:HG2_Ill_SVrefine2DISCOVARplusDovetail_9162:HG2_Ill_Krunchall_5778:HG2_Ill_GATKHC_6747:HG2_Ill_GATKHCSBGrefine_2725:HG2_Ill_FB_3724:HG2_Ill_250bpfermikitraw_5661:HG2_Ill_150bpfermikitraw_5237:HG2_10X_SVrefine210Xhap12_3014:HG2_PB_assemblyticsfalcon_18802:HG2_PB_SVrefine2Falcon2Bionano_1941;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3014:HG2_Ill_150bpfermikitraw_5237:HG2_Ill_250bpfermikitraw_5661:HG2_Ill_FB_3724:HG2_Ill_GATKHCSBGrefine_2725:HG2_Ill_GATKHC_6747:HG2_Ill_Krunchall_5778:HG2_Ill_SVrefine2DISCOVARplusDovetail_9162:HG2_Ill_SpiralSDKrefine_11839:HG2_Ill_svaba_5147:HG2_PB_SVrefine2PB10Xhap12_2990:HG2_PB_SVrefine2PBcRplusDovetail_7862:HG3_Ill_150bpfermikitraw_5308:HG3_Ill_250bpfermikitraw_5482:HG3_Ill_GATKHCSBGrefine_2716:HG3_Ill_GATKHC_6766:HG3_Ill_Krunchall_5675:HG3_Ill_SVrefine2DISCOVARDovetail_3145:HG3_Ill_Spiral_4454:HG3_Ill_manta_919:HG3_Ill_svaba_5233:HG4_Ill_150bpfermikitraw_5457:HG4_Ill_250bpfermikitraw_5730:HG4_Ill_GATKHCSBGrefine_2838:HG4_Ill_GATKHC_6855:HG4_Ill_Krunchall_5991:HG4_Ill_SVrefine2DISCOVARDovetail_3134:HG4_Ill_manta_997:HG4_Ill_svaba_5261:HG4_PB_SVrefine2Falcon1Dovetail_2485:HG4_PB_SVrefine2PBcRDovetail_2092;NumExactMatchSVs=31;ClusterMaxShiftDist=0.168067;ClusterMaxSizeDiff=0.168067;ClusterMaxEditDist=0.369748;PBcalls=14;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=58;DistBack=20243;DistForward=9302;DistMin=9302;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=3:197574550-197574553;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3903.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:0:19:0:9:./.:0:0:0:0:1/1:0:66:./.:.:.:.:.:.
chr4	560472	HG2_PB_PB10Xdip_22391	T	CCCACCCCCTACATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTTCATGCCACCCCTTCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTTCATGCCACCCCTTCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTTCATCCCACGCCTGCATCCCACCCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTGCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCTGCATCCGACCCCTTCATCCCACCCCCTGCATCCCACCCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCCGCATCCCACCCCCTACATCCCACCCCCGCATCCCACCCCCTTCATCCCACCCCCGCATCCCACCCCCTACATCCCACCCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCCTGCATCCCACCCCCTGCATCCCCCCCCTACATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATTCCACCCCCTACATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCTGTATCCCACCCCTGCATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCCTTCATGCCACCCCTTCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCTACATCCCACCCCCTGCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTGCCTCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTGCATCCCACCCTCTTCATCCCACCCCTGCATCCCACCCCCTTCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGAATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCCTTCATGCCACCTCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCCTGCATCCCACCCCCTGCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCCTGCATGCCACCCCCTACATCCCACCCCTACATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCCTTCATGCCACCCCTGCATCCCACCCCTGCATCCCACCCCCTGCATCCCACCCCCTACATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCTGCATCCCACCCCTTCATCCCACCCCCTGCATCCCACCCCCTGCATCCCACCCCTGCATCCCACCCCCTACATCCCACCCCCTGCATGCCACCCCCTACATCCCACCCCTGCAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3000:HG3_PB_pbsv_3964:HG2_PB_PB10Xdip_22391:HG4_PB_pbsv_4089:HG3_PB_SVrefine2Falcon1Dovetail_2561:HG2_PB_assemblyticsPBcR_18199:HG3_PB_assemblyticsfalcon_18718:HG2_PB_SVrefine2PBcRplusDovetail_7871:HG2_PB_SVrefine2Falcon1plusDovetail_8477:HG2_PB_SVrefine2Falcon2Bionano_1947:HG4_PB_SVrefine2Falcon1Dovetail_2491;NumClusterSVs=11;ExactMatchIDs=HG2_PB_PB10Xdip_22391;NumExactMatchSVs=1;ClusterMaxShiftDist=0.213667;ClusterMaxSizeDiff=0.212384;ClusterMaxEditDist=0.306705;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=3246;DistBack=21;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=346;REFWIDENED=4:560413-560758;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9997;PctRecOverlap=0.9951;SizeDiff=-1;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=99;MatchId=3905.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:127:./.:2:3:0:3:./.:0:0:0:0:0/1:2:6:1/1:2:43:.:7503:.
chr4	654728	HG4_PB_SVrefine2Falcon1Dovetail_2492	A	AATGAATGGATGGGTGGATGCCAATGGTAGTTGGATAGTTGGATAAATGGATGGATGGGTGGGTGGGCCAATGGTAGTTGGATAGTTGGATAAATGGATGGATGGGTGGGTGGGCCATGGTAGTTGGATGGTTGGATAAATTGATGGATGGGTGGGTGGGCGGGCCAATGGTAGTTGGATGGTTGGATAAATGGATGGATGGGTGGGTGGGCCAATGGTAGTTGGATGGTTGGATAAATGGATGGATGGGTGGGTGGGCCAATGGTAGTTGGATGGTTGGATAAATTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1948:HG2_PB_assemblyticsPBcR_18202:HG4_PB_pbsv_4090:HG2_PB_PB10Xdip_22423:HG3_PB_pbsv_3965:HG2_PB_PB10Xdip_22422:HG2_PB_HySA_7667:HG3_PB_HySA_6274:HG2_PB_pbsv_4064:HG3_PB_SVrefine2Falcon1Dovetail_2562:HG4_Ill_MetaSV_3611:HG2_Ill_MetaSV_3464:HG4_PB_SVrefine2PBcRDovetail_2099:HG4_PB_SVrefine2Falcon1Dovetail_2492:HG3_PB_SVrefine2PBcRDovetail_1907:HG2_PB_SVrefine2PBcRplusDovetail_7872:HG2_PB_SVrefine2PB10Xhap12_3001;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1948:HG4_PB_SVrefine2PBcRDovetail_2099:HG4_PB_SVrefine2Falcon1Dovetail_2492:HG3_PB_SVrefine2PBcRDovetail_1907:HG2_PB_SVrefine2PBcRplusDovetail_7872:HG2_PB_SVrefine2PB10Xhap12_3001;NumExactMatchSVs=6;ClusterMaxShiftDist=0.154839;ClusterMaxSizeDiff=0.154839;ClusterMaxEditDist=0.296063;PBcalls=15;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=287;DistBack=1176;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=155;REFWIDENED=4:654729-654883;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9931;PctRecOverlap=0.872;SizeDiff=-2;StartDistance=-36;EndDistance=-36;GTMatch=0;TruScore=95;MatchId=3906.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:1:14:0:9:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr4	821448	HG4_Ill_SVrefine2DISCOVARDovetail_3148	C	CATCCCCAGACCCCTTCTTGCCAGCCACCCCTGGGTCCCTGGTGGCCCGTCAGGTCACCACCTCCCCTCGTGGGAGGCCTCAGTCCTCACGCACCTCCAGCTGGATATGCTGTGGAGTGGACGGTCTGTTTCCCG	20	PASS	ClusterIDs=HG4_PB_HySA_6114:HG2_PB_HySA_7676:HG2_PB_pbsv_4076:HG4_PB_pbsv_4105:HG2_PB_SVrefine2Falcon2Bionano_1954:HG4_PB_SVrefine2PBcRDovetail_2103:HG4_Ill_manta_999:HG4_Ill_SVrefine2DISCOVARDovetail_3148:HG4_Ill_MetaSV_3614:HG4_Ill_GATKHCSBGrefine_2850:HG2_Ill_manta_1145:HG2_Ill_SpiralSDKrefine_11849:HG2_Ill_MetaSV_3465:HG2_10X_SVrefine210Xhap12_3029:HG4_PB_SVrefine2Falcon1Dovetail_2498;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3029:HG2_Ill_MetaSV_3465:HG2_Ill_SpiralSDKrefine_11849:HG2_Ill_manta_1145:HG4_Ill_GATKHCSBGrefine_2850:HG4_Ill_MetaSV_3614:HG4_Ill_SVrefine2DISCOVARDovetail_3148:HG4_Ill_manta_999:HG4_PB_SVrefine2PBcRDovetail_2103;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0729927;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.211679;PBcalls=7;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=134;DistBack=1192;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:821449-821450;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3908.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:15:0|1:22:1:0:14:./.:0:0:0:0:0/1:38:17:./.:.:.:.:.:.
chr4	961947	HG4_PB_SVrefine2PBcRDovetail_2106	G	GAGCACCCACCTGGAACCCGCGCCTCTCCTGCCCCGCCCCGCCAACTCCTCCACCTCCCAGCACCCACCCAACCCCGCACCTCTCCTGCCCCACCCCCACCCCCTCCACCTCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3008:HG3_PB_assemblyticsfalcon_18747:HG3_PB_SVrefine2Falcon1Dovetail_2573:HG4_PB_pbsv_4114:HG4_PB_SVrefine2Falcon1Dovetail_2502:HG3_PB_HySA_6286:HG4_PB_HySA_6122:HG3_PB_pbsv_3980:HG2_10X_SVrefine210Xhap12_3033:HG2_PB_HySA_7686:HG2_PB_PB10Xdip_22700:HG2_PB_PB10Xdip_22699:HG3_PB_SVrefine2PBcRDovetail_1911:HG2_PB_SVrefine2Falcon2Bionano_1958:HG2_PB_SVrefine2Falcon1plusDovetail_8486:HG4_PB_SVrefine2PBcRDovetail_2106:HG2_PB_SVrefine2PBcRplusDovetail_7878;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3008:HG4_PB_SVrefine2PBcRDovetail_2106:HG2_PB_SVrefine2PBcRplusDovetail_7878;NumExactMatchSVs=3;ClusterMaxShiftDist=0.124481;ClusterMaxSizeDiff=0.110638;ClusterMaxEditDist=0.257511;PBcalls=16;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=113;DistBack=6857;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=140;REFWIDENED=4:961948-962087;PctSeqSimilarity=0.9838;PctSizeSimilarity=1;PctRecOverlap=0.646;SizeDiff=0;StartDistance=-40;EndDistance=-40;GTMatch=0;TruScore=87;MatchId=3909.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:39:1/1:2:20:1:14:./.:0:0:0:0:./.:1:2:./.:.:.:.:.:.
chr4	1019870	HG3_PB_SVrefine2PBcRDovetail_1913	C	CGCAGATATGCTGCCTGGACACACACACAGATAATGCTGCCTCAACACTCACACACGTGCAGATATTGCCTGGACACACACATGTGCACAGATATGCTGTCTGGACATGCACACACGTGCAGATATGCTGTCCGGATACACACGCACGCACACATGCAGATATGCTGCCTGGGCACACACTTCCGGACACACATGCACACACAGGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3010:HG3_PB_pbsv_3982:HG3_PB_HySA_6289:HG4_PB_HySA_6125:HG4_PB_pbsv_4116:HG2_PB_SVrefine2Falcon2Bionano_1960:HG2_PB_HySA_7691:HG2_PB_PB10Xdip_22702:HG2_PB_PB10Xdip_22701:HG3_PB_SVrefine2Falcon1Dovetail_2575:HG2_PB_SVrefine2Falcon1plusDovetail_8488:HG4_PB_SVrefine2PBcRDovetail_2108:HG4_PB_SVrefine2Falcon1Dovetail_2504:HG3_PB_SVrefine2PBcRDovetail_1913:HG2_PB_SVrefine2PBcRplusDovetail_7880;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3010:HG4_PB_SVrefine2PBcRDovetail_2108:HG4_PB_SVrefine2Falcon1Dovetail_2504:HG3_PB_SVrefine2PBcRDovetail_1913:HG2_PB_SVrefine2PBcRplusDovetail_7880;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0610329;ClusterMaxSizeDiff=0.0382775;ClusterMaxEditDist=0.271429;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=205;DistBack=-205;DistForward=3951;DistMin=-205;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=228;REFWIDENED=4:1019871-1020098;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3910.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:1:12:0:16:./.:0:0:0:0:0/1:4:9:./.:.:.:.:.:.
chr4	1040123	HG2_PB_HySA_7693	C	CTTTCCCAGCCCTCCCCGAGCCCTTCCCGAGCCTTTCCCGAGCCCTCCCGAGCCCTTCCCGAGCCCTTCCCGAGCCTTCCCGAGCCTTCCGAGCTTCCCGAGCCCTTCCCGAGCCTTTCCCCAGCCCTCCCCGAGCCCTTCCCGAGCCCTTCCAGAGCCCTCCCGAGCCCTTCCCGAGCCCTCCCCGAGCCCTCCCCGAGCCCTTCCAGAGCCCTTCCGAGCCTTTCCCCAGCCCTTCCCGAGCCTTTCCCCAGCCCTCCCCGAGCCCTTCCCGAGCCTTTCCCCAGCCCTCCCCGAGCCCTTCTCGAGCCTTCCCCAGCCCTTTCCCGAGCCCTTCCCGAGCCTTTCCGCAGCCCTCCCCGAGCCTTCCCGAGCCCTTCCCGAGCCTTCCGGCCCTCCCCGAGCCTTTCCCCAGCCCTCCCCGAGCCCTTCCCGAGCCCTTCCCCAGCCATCCCCGAGCCCTTCCCGAGCCCTCCCCGAGCCCTTCCCGAGCCCTCCCGAGCCCTTCCCGAGCCCTCCCCGAGCCCTTCCCCAGCCCCCCCCGAGCCCTTCCCCAGCCCTCCCGAGCCTTTCCGCAGCCCTTCCCGAGCCCTTCCAGAGCCCTCCCCGAGCCCTTCCCGAGCCCTCCCCGAGCCCTTCCCCAGCCCTCCCCGAGCCCTTCCCCAGCCCTCCCCGAGCCTTTCCGCAGCCCTTCCCGAGCCCTTCCAGAGCCCTTCCCGAGCCCTTCCCAAGACTTTCCCCAGCCCTCCCTGAGCCCTTCCCGAGCCTTTCCCCAGCCCTCCCCGAGCCCTTCCGAGCCCTTCCCGAGCCCTTCCCGAGCCCTTCCCCGAGCCCTTCCCCGCAGCCCTTCCCGAGCCCTTCCCGCAGCCCTCCCCGAGCTTCCCCGAGCCGTCCCCGAGCCCTTCCAGAGCCCTTCCCGAGCCTTCCCCAGCCCTCCCGAGCCCTTCCCGAGCCCTTCCCCAGCCGTCCCCGAGCCCTTCCAGAGCCCTTCCCGAGCCTTTCCCCAGCCCTCCCGAGCCCTTCCCGAGCCTTTCCCCGAGCCCTCCCCGAGCCCTCCCGAGCCTTCCGAGCCTTTCCCCAGCCCTCCCCGCGCCCTTGCCGAGCCTTTCCCGAGCCTTTCCCCAGCCCTCCACGAGCCCTTCCCGAGCCCTTCCCGAGCCTTCCCGAGCCCTTCCCGAGCCTTCCCCGAGCCCTTCCCGAGCCATCCCCGAGCCCTTCCCCAGCCCTCCCCGAGCCCTTCCCGAGCCCTTCCCGAGCCATTCCCGAGCCCTTCCAGAGCCCTTCCCGAGCCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3012:HG2_PB_HySA_7693:HG4_PB_SVrefine2Falcon1Dovetail_2506:HG4_PB_SVrefine2Falcon1Dovetail_2505:HG3_PB_SVrefine2Falcon1Dovetail_2576:HG2_PB_SVrefine2Falcon2Bionano_1962:HG2_PB_SVrefine2Falcon1plusDovetail_8489:HG3_PB_SVrefine2PBcRDovetail_1914:HG2_PB_SVrefine2PBcRplusDovetail_7881;NumClusterSVs=9;ExactMatchIDs=HG2_PB_HySA_7693;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0999594;ClusterMaxSizeDiff=0.0999594;ClusterMaxEditDist=0.195855;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1291;DistBack=4;DistForward=8;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=454;REFWIDENED=4:1039757-1040210;PctSeqSimilarity=0.9697;PctSizeSimilarity=0.957;PctRecOverlap=0.9051;SizeDiff=-58;StartDistance=-99;EndDistance=-99;GTMatch=1;TruScore=94;MatchId=3911.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:60:1/1:2:14:1:5:./.:0:0:0:0:./.:0:0:0/1:14:52:.:.:.
chr4	1230306	HG4_PB_SVrefine2PBcRDovetail_2114	C	CCACAGGGCAAACCCGGTGTCCACCTCCTGATGGGGCTCAGGACAAACCGAGTGTCCACCTCCTGATGGGGCTCAGGACAAACCCCGTGTCCACCTCCTGATGGGGCTCAGGGCAAACCCGGTGTCCACCTCCTGATGGGGCTCAGGGCAAACCCGGTGTCCACCTCCTGATGGGGCACAGGGCAAACCAAGTGTCCACCTCCTGATGGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1967:HG3_PB_SVrefine2PBcRDovetail_1919:HG4_PB_pbsv_4126:HG2_PB_pbsv_4097:HG2_PB_PB10Xdip_21306:HG3_PB_pbsv_3989:HG2_PB_PB10Xdip_21305:HG3_PB_HySA_6307:HG2_PB_HySA_7709:HG4_PB_HySA_6138:HG2_PB_SVrefine2Falcon1plusDovetail_8493:HG3_PB_SVrefine2Falcon1Dovetail_2581:HG4_PB_SVrefine2PBcRDovetail_2114:HG4_PB_SVrefine2Falcon1Dovetail_2511:HG2_PB_SVrefine2PBcRplusDovetail_7886:HG2_PB_SVrefine2PB10Xhap12_3018;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1967:HG4_PB_SVrefine2PBcRDovetail_2114:HG4_PB_SVrefine2Falcon1Dovetail_2511:HG2_PB_SVrefine2PBcRplusDovetail_7886:HG2_PB_SVrefine2PB10Xhap12_3018;NumExactMatchSVs=5;ClusterMaxShiftDist=0.121065;ClusterMaxSizeDiff=0.121065;ClusterMaxEditDist=0.228972;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=210;DistBack=25736;DistForward=176;DistMin=176;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=742;REFWIDENED=4:1230307-1231048;PctSeqSimilarity=0.9832;PctSizeSimilarity=1;PctRecOverlap=0.1611;SizeDiff=0;StartDistance=-177;EndDistance=-177;GTMatch=0;TruScore=71;MatchId=3912.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:66:./.:0:4:0:4:./.:0:0:0:0:./.:5:0:./.:.:.:.:.:.
chr4	1301816	HG2_PB_SVrefine2PBcRplusDovetail_7891	G	GAAAAACTCTCAGAAATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3404:HG3_PB_HySA_6313:HG4_PB_pbsv_4130:HG2_PB_pbsv_4101:HG3_PB_pbsv_3993:HG2_10X_SVrefine210Xhap12_3045:HG2_PB_assemblyticsfalcon_18851:HG3_PB_assemblyticsfalcon_18767:HG3_Ill_MetaSV_3626:HG2_PB_HySA_7714:HG4_PB_HySA_6143:HG2_PB_PB10Xdip_21358:HG2_PB_PB10Xdip_21357:HG3_PB_HySA_6312:HG4_PB_SVrefine2Falcon1Dovetail_2516:HG3_PB_SVrefine2PBcRDovetail_1924:HG2_PB_SVrefine2PBcRplusDovetail_7891:HG2_PB_SVrefine2PB10Xhap12_3023:HG2_PB_SVrefine2Falcon2Bionano_1972:HG4_PB_SVrefine2PBcRDovetail_2119:HG4_Ill_MetaSV_3619:HG4_Ill_GATKHCSBGrefine_2864:HG3_Ill_GATKHCSBGrefine_2736:HG2_Ill_MetaSV_3469:HG2_PB_SVrefine2Falcon1plusDovetail_8498:HG3_PB_SVrefine2Falcon1Dovetail_2586;NumClusterSVs=26;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1972:HG2_PB_SVrefine2PB10Xhap12_3023:HG2_PB_SVrefine2PBcRplusDovetail_7891:HG3_PB_SVrefine2PBcRDovetail_1924:HG4_PB_SVrefine2Falcon1Dovetail_2516;NumExactMatchSVs=5;ClusterMaxShiftDist=0.1625;ClusterMaxSizeDiff=0.1625;ClusterMaxEditDist=0.234375;PBcalls=19;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=320;DistBack=2249;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=4:1301817-1301833;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3913.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:14:0:5:./.:0:0:0:0:1/1:0:23:1/1:1:61:.:.:.
chr4	1313435	HG4_Ill_manta_1003	C	CATCACTTGAGCCCAGGAGTTCAAGACCAGCCTGGGCAATGTGGCAAGACCCTATTTGTGTAAAAATAAAAAATTAACTGGGCATGGTGGTGTGCGCCTACAGTCCCAGCTACTCAGGAGGCTGAGGTGGGATG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2588:HG3_PB_HySA_6315:HG2_PB_assemblyticsfalcon_18853:HG4_PB_pbsv_4132:HG2_PB_SVrefine2Falcon2Bionano_1974:HG3_PB_pbsv_3996:HG4_PB_SVrefine2Falcon1Dovetail_2518:HG4_Ill_manta_1003:HG4_Ill_SVrefine2DISCOVARDovetail_3158:HG4_Ill_GATKHCSBGrefine_2865:HG3_Ill_Spiral_4472:HG3_Ill_GATKHCSBGrefine_2737:HG3_Ill_250bpfermikitraw_5504:HG3_Ill_150bpfermikitraw_5331:HG2_PB_SVrefine2PBcRplusDovetail_7893:HG2_PB_SVrefine2PB10Xhap12_3025:HG2_PB_SVrefine2Falcon1plusDovetail_8500:HG2_Ill_SVrefine2DISCOVARplusDovetail_9179:HG2_Ill_MetaSV_3470:HG2_Ill_GATKHCSBGrefine_2741:HG2_Ill_250bpfermikitraw_5690:HG2_Ill_150bpfermikitraw_5268:HG2_PB_HySA_7716:HG2_PB_PB10Xdip_21387:HG2_PB_pbsv_4104:HG3_PB_SVrefine2PBcRDovetail_1926;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5268:HG2_Ill_250bpfermikitraw_5690:HG2_Ill_GATKHCSBGrefine_2741:HG2_Ill_MetaSV_3470:HG2_Ill_SVrefine2DISCOVARplusDovetail_9179:HG2_PB_SVrefine2Falcon1plusDovetail_8500:HG2_PB_SVrefine2PB10Xhap12_3025:HG2_PB_SVrefine2PBcRplusDovetail_7893:HG3_Ill_150bpfermikitraw_5331:HG3_Ill_250bpfermikitraw_5504:HG3_Ill_GATKHCSBGrefine_2737:HG3_Ill_Spiral_4472:HG4_Ill_GATKHCSBGrefine_2865:HG4_Ill_SVrefine2DISCOVARDovetail_3158:HG4_Ill_manta_1003:HG4_PB_SVrefine2Falcon1Dovetail_2518;NumExactMatchSVs=16;ClusterMaxShiftDist=0.137184;ClusterMaxSizeDiff=0.0938628;ClusterMaxEditDist=0.281588;PBcalls=14;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=133;DistBack=-1;DistForward=15;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=4:1313427-1313452;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3914.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:./.:1:5:0:1:./.:0:0:0:0:1/1:0:24:./.:.:.:.:1673:.
chr4	1350766	HG2_PB_SVrefine2PB10Xhap12_3027	T	TCAGCTGGCTTATTGGTGAGGGTCCACAGAGCAGAGCGGGGCTGATGGGTGGCATGGTCTGGTCTCATCAGGCCTGGGCCCCTCCAGCTGGTTATTGGTGAGGGTCCATAGAGCAGAGCGGGGCTGATGGGTGGCATGGTCTGGTCTCATCAGGCCTGGGCCCCTCCAGCTGGTTATTGGTGAGGGTCCATAGAGCAGAGGGGGGCTGATGGGTGGCATGGTCTGGTCTCATCAGGCCTGGGCCCCTCCAGCTGGTTATTGGTGAGGGTCCATAGAGCAGAGCGGGGCTGATGGGTGGCATGGTCTGGTCTCATCAGGCCTGGGCCCCTCCAGCTGGTTATTGGTGAGGGTCCATAGAGCAGAGCGGGGCTGATGGGTGGCATGGTCTGGTCTCATCAGGCCTGGGCCCCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8502:HG2_PB_pbsv_4108:HG3_PB_pbsv_4001:HG2_PB_HySA_7721:HG2_PB_PB10Xdip_21424:HG2_PB_PB10Xdip_21423:HG3_PB_SVrefine2PBcRDovetail_1929:HG3_PB_SVrefine2Falcon1Dovetail_2590:HG4_PB_SVrefine2Falcon1Dovetail_2520:HG2_PB_SVrefine2PBcRplusDovetail_7895:HG2_PB_SVrefine2PB10Xhap12_3027:HG2_PB_SVrefine2Falcon2Bionano_1976;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1976:HG2_PB_SVrefine2PB10Xhap12_3027:HG2_PB_SVrefine2PBcRplusDovetail_7895:HG4_PB_SVrefine2Falcon1Dovetail_2520;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0430622;ClusterMaxSizeDiff=0.0382775;ClusterMaxEditDist=0.124413;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=411;DistBack=7884;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=336;REFWIDENED=4:1350767-1351102;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9976;PctRecOverlap=0.9124;SizeDiff=1;StartDistance=-36;EndDistance=-36;GTMatch=0;TruScore=96;MatchId=3916.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:99:1/1:0:21:0:14:./.:0:0:0:0:./.:0:2:./.:2:6:.:.:.
chr4	1498769	HG2_Ill_GATKHCSBGrefine_2746	T	TGGATGGATAATGGGTGGATGGAGAGATAAATGAACGGACAGATGTATGGATGGATGTGTAGATGATGGATGGATGGATGGATGGAGAGATAAATGAATGGACAGATGTATGGATGGATGTGTAAATGATGGGTGGATGGATGGATGGAAGAAATGGGTGTATGGATAGATGAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3053:HG4_PB_pbsv_4143:HG2_PB_PB10Xdip_21536:HG3_PB_pbsv_4008:HG4_Ill_GATKHC_6906:HG2_PB_pbsv_4115:HG4_Ill_GATKHCSBGrefine_2870:HG4_Ill_250bpfermikitraw_5759:HG4_Ill_150bpfermikitraw_5484:HG3_Ill_GATKHC_6812:HG3_Ill_GATKHCSBGrefine_2742:HG2_Ill_GATKHC_6797:HG2_Ill_GATKHCSBGrefine_2746:HG2_PB_HySA_7730:HG2_PB_SVrefine2PB10Xhap12_3032:HG4_PB_SVrefine2PBcRDovetail_2128:HG4_PB_SVrefine2Falcon1Dovetail_2525:HG4_Ill_SVrefine2DISCOVARDovetail_3161:HG2_PB_SVrefine2Falcon2Bionano_1981:HG2_Ill_SVrefine2DISCOVARplusDovetail_9184;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2746:HG2_Ill_GATKHC_6797:HG3_Ill_GATKHCSBGrefine_2742:HG3_Ill_GATKHC_6812:HG4_Ill_150bpfermikitraw_5484:HG4_Ill_250bpfermikitraw_5759:HG4_Ill_GATKHCSBGrefine_2870:HG4_Ill_GATKHC_6906;NumExactMatchSVs=8;ClusterMaxShiftDist=0.126437;ClusterMaxSizeDiff=0.114943;ClusterMaxEditDist=0.289855;PBcalls=9;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=173;DistBack=-601;DistForward=15996;DistMin=-601;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=606;REFWIDENED=4:1498645-1499250;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3917.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:0|1:25:2:1:15:./.:0:0:0:0:0/1:13:13:./.:.:.:.:.:.
chr4	1616058	HG2_PB_SVrefine2Falcon2Bionano_1984	G	GGTGAGGGGGATACAGAGAAGTGAGGGGGATGCAGAGACGTGAGGGGGATGCAGAGAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8511:HG2_PB_HySA_7752:HG3_PB_pbsv_4015:HG3_PB_HySA_6333:HG2_PB_pbsv_4125:HG3_PB_SVrefine2PBcRDovetail_1937:HG2_PB_SVrefine2Falcon2Bionano_1984;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1984:HG3_PB_SVrefine2PBcRDovetail_1937;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0862069;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.302521;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=57;DistBack=12282;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=210;REFWIDENED=4:1616059-1616268;PctSeqSimilarity=0.9805;PctSizeSimilarity=1;PctRecOverlap=0.6667;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=88;MatchId=3918.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:1|0:2:26:21:2:./.:0:0:0:0:0/0:9:0:./.:.:.:.:.:.
chr4	1758508	HG2_PB_SVrefine2PB10Xhap12_3046	A	AAGCCCGGCCCCCAGGGCCAGTGTGGGAGCACCGGGGTGCCCCAGGTCCTGGCCAGGCTGTAGCCCGGCCCCCAAGGCCAGTGTGGGAGCACCGGGGTGCCCCAGGTCCTGGCCAGGCTGTAGCCCGGCCCCCATGGCCAGTGTGGGAGCACCGGGGTGCCCCAGGTCCTGACCAGGCTGTAGCCCGGCCCCCAAGGCCAGTGTGGGAGCACCGGGGTGCCCCAGGTCCTGGCCAGGCTGTAGCCCGGCCCCCATGGCCAGTGTGGGAGCACCGGGGTGCCCCAGGTCCTGGCCAGGCTGT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_21563:HG3_PB_pbsv_4020:HG4_Ill_SVrefine2DISCOVARDovetail_3166:HG4_PB_pbsv_4163:HG2_PB_HySA_7770:HG2_PB_pbsv_4132:HG4_PB_SVrefine2Falcon1Dovetail_2535:HG2_PB_SVrefine2PBcRplusDovetail_7908:HG2_PB_SVrefine2PB10Xhap12_3046:HG2_PB_SVrefine2Falcon2Bionano_1986:HG2_PB_SVrefine2Falcon1plusDovetail_8515:HG2_Ill_SVrefine2DISCOVARplusDovetail_9189:HG4_PB_SVrefine2PBcRDovetail_2134:HG3_PB_SVrefine2Falcon1Dovetail_2606:HG2_PB_PB10Xdip_21564;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9189:HG2_PB_SVrefine2Falcon1plusDovetail_8515:HG2_PB_SVrefine2Falcon2Bionano_1986:HG2_PB_SVrefine2PB10Xhap12_3046:HG2_PB_SVrefine2PBcRplusDovetail_7908:HG4_Ill_SVrefine2DISCOVARDovetail_3166;NumExactMatchSVs=6;ClusterMaxShiftDist=0.092257;ClusterMaxSizeDiff=0.0889621;ClusterMaxEditDist=0.295455;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=300;DistBack=7513;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=240;REFWIDENED=4:1758509-1758748;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3921.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:65:1/1:7:29:2:14:./.:0:0:0:0:1/1:0:39:1/1:0:11:.:.:.
chr4	2338692	HG4_Ill_GATKHCSBGrefine_2875	T	TGGTGAGGAGTGAGGAGGTGAGGAGTTAGGAGGTGGGGAAGTGAGGAGGTGAGGAGTGAGGGGGTGAGGAGTTAGGA	20	PASS	ClusterIDs=HG2_PB_HySA_7775:HG3_PB_HySA_6346:HG4_PB_assemblyticsfalcon_18507:HG3_PB_pbsv_4025:HG4_PB_pbsv_4168:HG4_Ill_GATKHC_6927:HG4_Ill_GATKHCSBGrefine_2875:HG3_Ill_GATKHC_6832:HG2_Ill_GATKHC_6814:HG2_PB_PB10Xdip_21937:HG2_PB_PB10Xdip_21936;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHC_6814:HG3_Ill_GATKHC_6832:HG4_Ill_GATKHCSBGrefine_2875:HG4_Ill_GATKHC_6927;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.2375;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=8;DistForward=14;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=4:2338691-2338753;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3922.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:1:6:0:7:./.:0:0:0:0:./.:2:5:./.:.:.:.:.:.
chr4	2467357	HG2_PB_assemblyticsfalcon_18896	G	GAGGGCCCCTGCCTCCCCTCCCTGCACAGGCAGCTAAGGGGCACACCCTTAAGAGCCCAGGGCCTTCACACT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_5716:HG4_PB_HySA_6193:HG2_PB_PB10Xdip_21941:HG2_PB_PB10Xdip_21940:HG4_PB_assemblyticsfalcon_18512:HG3_PB_assemblyticsfalcon_18816:HG2_PB_assemblyticsfalcon_18896:HG2_PB_assemblyticsPBcR_18275:HG2_PB_pbsv_4144:HG3_PB_HySA_6356:HG2_PB_HySA_7785:HG4_Ill_250bpfermikitraw_5785:HG4_PB_pbsv_4176;NumClusterSVs=13;ExactMatchIDs=HG2_PB_assemblyticsPBcR_18275:HG2_PB_assemblyticsfalcon_18896:HG3_PB_assemblyticsfalcon_18816:HG4_PB_assemblyticsfalcon_18512;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0680272;ClusterMaxEditDist=0.22069;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=70;DistForward=1016;DistMin=70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=217;REFWIDENED=4:2467243-2467459;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3923.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:37:1/1:0:9:1:8:./.:0:0:0:0:1/1:1:24:./.:.:.:.:.:.
chr4	2763143	HG2_Ill_SVrefine2DISCOVARplusDovetail_9198	G	GCCCATGAAAAACACCAAGTTCTCTCCTGCCTCAGGACTTTGTACCTGCTGCTTCAGTGCCTGGAATACTGACTCCTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2613:HG2_PB_HySA_7788:HG4_PB_HySA_6195:HG2_PB_pbsv_4145:HG3_PB_pbsv_4034:HG4_PB_SVrefine2PBcRDovetail_2138:HG4_PB_pbsv_4177:HG4_PB_SVrefine2Falcon1Dovetail_2541:HG3_Ill_SVrefine2DISCOVARDovetail_3183:HG2_Ill_SVrefine2DISCOVARplusDovetail_9198;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9198:HG3_Ill_SVrefine2DISCOVARDovetail_3183:HG4_PB_SVrefine2Falcon1Dovetail_2541;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0875;ClusterMaxSizeDiff=0.075;ClusterMaxEditDist=0.242038;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=77;DistBack=40055;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=233;REFWIDENED=4:2763144-2763376;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3924.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:./.:9:10:9:9:./.:0:0:0:0:0/1:20:4:./.:.:.:.:.:.
chr4	3295694	HG2_PB_SVrefine2Falcon2Bionano_1995	G	GAGTGTAGACAGTGGAGTGTGGACAGAGAAGGGGCCCATCGCCGTGGAGTGTGGACTGTGGAGTGTAGACAGAGCCATGGAGTGTAGACAGATAGGGGGCCCCGAGCCATGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3066:HG3_PB_assemblyticsfalcon_18826:HG2_PB_PB10Xdip_22134:HG2_PB_pbsv_4151:HG3_PB_SVrefine2Falcon1Dovetail_2618:HG4_PB_pbsv_4182:HG4_Ill_manta_1009:HG4_Ill_GATKHC_6940:HG4_Ill_Cortex_2561:HG3_PB_SVrefine2PBcRDovetail_1949:HG3_Ill_manta_923:HG3_Ill_GATKHCSBGrefine_2747:HG3_Ill_Cortex_2573:HG2_PB_SVrefine2PBcRplusDovetail_7919:HG2_PB_SVrefine2PB10Xhap12_3061:HG2_PB_SVrefine2Falcon2Bionano_1995:HG2_Ill_manta_1154:HG2_Ill_SVrefine2DISCOVARplusDovetail_9202:HG2_Ill_MetaSV_3474:HG2_Ill_GATKHC_6832:HG2_Ill_GATKHCSBGrefine_2757:HG2_Ill_Cortex_6023:HG2_10X_SVrefine210Xhap12_3067:HG4_Ill_svaba_5338:HG3_Ill_svaba_5302:HG2_Ill_svaba_5223:HG2_Ill_breakscan11_3407:HG2_PB_assemblyticsPBcR_18284:HG4_PB_HySA_6207:HG2_PB_HySA_7792:HG3_PB_pbsv_4040:HG4_Ill_SVrefine2DISCOVARDovetail_3179:HG3_Ill_SVrefine2DISCOVARDovetail_3185:HG2_PB_SVrefine2Falcon1plusDovetail_8524;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3067:HG2_Ill_Cortex_6023:HG2_Ill_GATKHCSBGrefine_2757:HG2_Ill_GATKHC_6832:HG2_Ill_MetaSV_3474:HG2_Ill_SVrefine2DISCOVARplusDovetail_9202:HG2_Ill_manta_1154:HG2_PB_SVrefine2Falcon2Bionano_1995:HG2_PB_SVrefine2PB10Xhap12_3061:HG2_PB_SVrefine2PBcRplusDovetail_7919:HG3_Ill_Cortex_2573:HG3_Ill_GATKHCSBGrefine_2747:HG3_Ill_manta_923:HG3_PB_SVrefine2PBcRDovetail_1949:HG4_Ill_Cortex_2561:HG4_Ill_GATKHC_6940:HG4_Ill_manta_1009;NumExactMatchSVs=17;ClusterMaxShiftDist=0.119658;ClusterMaxSizeDiff=0.119658;ClusterMaxEditDist=0.228814;PBcalls=14;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=111;DistBack=40;DistForward=54;DistMin=40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=115;REFWIDENED=4:3295635-3295749;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3925.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:64:1/1:5:35:0:24:./.:0:0:0:0:1/1:0:10:./.:.:.:.:.:.
chr4	3478051	HG2_PB_SVrefine2Falcon1plusDovetail_8528	T	CACCCCACCCGCCCGTGATGCCCTCTCACCTCACCCGCCCATGATGCCCTCTCACCCCACCCGCCCGTGATGCCCTCTCACCTCACCCGCCCATGATGCCTCTCACCCCACCCGCCCGTGATGACCTCTC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2549:HG3_PB_HySA_6369:HG3_PB_assemblyticsfalcon_18834:HG3_PB_SVrefine2Falcon1Dovetail_2624:HG2_PB_assemblyticsfalcon_18911:HG2_PB_SVrefine2Falcon1plusDovetail_8528:HG3_PB_SVrefine2PBcRDovetail_1952;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8528:HG2_PB_assemblyticsfalcon_18911:HG3_PB_SVrefine2Falcon1Dovetail_2624;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.249027;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=129;DistBack=-1;DistForward=6;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=195;REFWIDENED=4:3477856-3478050;PctSeqSimilarity=0.9615;PctSizeSimilarity=0.9923;PctRecOverlap=0.3053;SizeDiff=-1;StartDistance=90;EndDistance=90;GTMatch=0;TruScore=75;MatchId=3926.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:0|1:18:0:3:18:./.:0:0:0:0:0/1:11:2:./.:.:.:.:.:.
chr4	3727923	HG2_PB_SVrefine2PBcRplusDovetail_7929	A	GAAGGGAGGGAGGGAGAGAGGACAGAGGGAGAGGAGAGAGAGAGGTAGGTAGAGAGGGAGAGGAGAGAAGAGAGAAAGCGAGGGAGAGGAGAGAGAGG	20	PASS	ClusterIDs=HG3_PB_pbsv_4067:HG4_PB_SVrefine2PBcRDovetail_2147:HG2_PB_pbsv_4172:HG3_PB_SVrefine2PBcRDovetail_1958:HG3_PB_HySA_6389:HG2_PB_SVrefine2PBcRplusDovetail_7929:HG2_PB_SVrefine2Falcon2Bionano_2005:HG3_Ill_GATKHC_6874:HG2_PB_HySA_7825;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2005:HG2_PB_SVrefine2PBcRplusDovetail_7929:HG3_PB_SVrefine2PBcRDovetail_1958:HG4_PB_SVrefine2PBcRDovetail_2147;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0696517;ClusterMaxSizeDiff=0.0696517;ClusterMaxEditDist=0.305419;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=97;DistBack=-1;DistForward=97;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=310;REFWIDENED=4:3727708-3728017;PctSeqSimilarity=0.9949;PctSizeSimilarity=0.9897;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3928.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:5:32:1/1:2:16:2:5:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr4	4359537	HG3_Ill_SVrefine2DISCOVARDovetail_3196	T	TTCCAAATTCATCCCTGTTGGCGCATGTGTCAGAATGTCCTTCCTTTTTAAGGCTGGACAATACTTTACTGTACGGACAGACCACATTTTATTTATCCATCCTTCCATGGATGGACACCTGGGTTGCTTCCACC	20	PASS	ClusterIDs=HG2_PB_HySA_7850:HG2_10X_SVrefine210Xhap12_3083:HG2_PB_pbsv_4182:HG4_PB_pbsv_4213:HG4_PB_HySA_6251:HG4_PB_SVrefine2PBcRDovetail_2151:HG4_PB_SVrefine2Falcon1Dovetail_2557:HG4_Ill_SVrefine2DISCOVARDovetail_3185:HG4_Ill_250bpfermikitraw_5823:HG3_Ill_SVrefine2DISCOVARDovetail_3196:HG2_PB_SVrefine2Falcon1plusDovetail_8549;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8549:HG3_Ill_SVrefine2DISCOVARDovetail_3196:HG4_Ill_250bpfermikitraw_5823:HG4_Ill_SVrefine2DISCOVARDovetail_3185:HG4_PB_SVrefine2Falcon1Dovetail_2557:HG4_PB_SVrefine2PBcRDovetail_2151;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0857143;ClusterMaxSizeDiff=0.0857143;ClusterMaxEditDist=0.196364;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=133;DistBack=-132;DistForward=16;DistMin=-132;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=135;REFWIDENED=4:4359538-4359672;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3929.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:36:./.:12:16:15:9:./.:0:0:0:0:0/1:18:16:./.:.:.:.:.:.
chr4	5175094	HG3_PB_SVrefine2PBcRDovetail_1963	G	GCTTCTCTAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGCATTCGCTTGTCGTCAGGCGGACTGCGGACTGCATGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCGGTTCACGCCTCTCCTCCTCAGCCTCCCGAGTAGCTGGACTACGGCCCCCCACCGCCCCGGCTAATTTTTGTATTTTAGTGAGACGGGTTCACCTTGTTAGCAGGATGGTCTCGATCTCCTGACTCATGATCCCCGCTCGGCCTCCCAGTGCTGGTTACAGCGTGAGCCACCGCGCCCGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1963:HG2_PB_pbsv_4185:HG3_PB_pbsv_4079:HG2_PB_assemblyticsfalcon_18951:HG2_PB_SVrefine2Falcon1plusDovetail_8552;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_1963;NumExactMatchSVs=1;ClusterMaxShiftDist=0.144509;ClusterMaxSizeDiff=0.144509;ClusterMaxEditDist=0.177979;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=320;DistBack=13680;DistForward=31090;DistMin=13680;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:5175095-5175110;PctSeqSimilarity=0.9413;PctSizeSimilarity=0.8889;PctRecOverlap=0.8892;SizeDiff=-40;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=3931.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:33:./.:1:3:0:3:./.:0:0:0:0:./.:19:2:0/1:7:9:.:.:.
chr4	7183569	HG2_PB_SVrefine2Falcon2Bionano_2020	T	TCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACCCACCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACCCACCCACCCATCCATCCATCTATGCATCCATCCACGTATTCATCCATCCATCCATCCATCCATCCACCCACCCATCCATTCATCCATCCATCCATCCATACATCCACCCACCCATC	20	PASS	ClusterIDs=HG3_PB_pbsv_4101:HG4_PB_SVrefine2PBcRDovetail_2157:HG2_PB_HySA_7892:HG3_PB_HySA_6435:HG4_Ill_SVrefine2DISCOVARDovetail_3194:HG2_PB_pbsv_4201:HG3_PB_SVrefine2PBcRDovetail_1973:HG2_PB_SVrefine2PBcRplusDovetail_7948:HG3_Ill_SVrefine2DISCOVARDovetail_3211:HG2_PB_SVrefine2PB10Xhap12_3092:HG2_PB_SVrefine2Falcon2Bionano_2020:HG3_PB_SVrefine2Falcon1Dovetail_2649:HG4_PB_SVrefine2Falcon1Dovetail_2575:HG2_PB_SVrefine2Falcon1plusDovetail_8565:HG4_PB_pbsv_4235;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2020:HG2_PB_SVrefine2PB10Xhap12_3092:HG3_Ill_SVrefine2DISCOVARDovetail_3211;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.251781;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=204;DistBack=1170;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=157;REFWIDENED=4:7183573-7183729;PctSeqSimilarity=0.9623;PctSizeSimilarity=0.9808;PctRecOverlap=0.5215;SizeDiff=-4;StartDistance=-98;EndDistance=-98;GTMatch=0;TruScore=82;MatchId=3933.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:0:19:0:30:./.:0:0:0:0:0/1:6:5:./.:.:.:.:.:.
chr4	7754687	HG3_Ill_GATKHCSBGrefine_2794	T	TTACATGTTTATTAGCAAGGCCACTGGCTTCACATCCAACTCCATCCCCAGCTGGCTTTCCCCAGCTACCCCGGCCAGGCAGGGATGACTGCTCTGTTTCCCATGGTGTCTCCAGCACCTCAGTCTTGGTAGGTGTTCAATGAATATTTCCCGGATTAATAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_4221:HG2_PB_HySA_7920:HG2_PB_assemblyticsPBcR_18388:HG2_PB_HySA_7919:HG4_PB_SVrefine2PBcRDovetail_2164:HG4_PB_SVrefine2Falcon1Dovetail_2587:HG4_Ill_svaba_5434:HG4_Ill_manta_1023:HG4_Ill_SVrefine2DISCOVARDovetail_3200:HG4_Ill_MetaSV_3639:HG4_Ill_GATKHCSBGrefine_2932:HG4_Ill_Cortex_2580:HG4_Ill_250bpfermikitraw_5869:HG3_Ill_svaba_5406:HG3_Ill_manta_940:HG3_Ill_Spiral_4550:HG3_Ill_SVrefine2DISCOVARDovetail_3219:HG3_Ill_MetaSV_3646:HG3_Ill_GATKHCSBGrefine_2794:HG3_Ill_Cortex_2597:HG2_PB_SVrefine2PBcRplusDovetail_7956:HG2_PB_SVrefine2PB10Xhap12_3105:HG2_PB_SVrefine2Falcon2Bionano_2026:HG2_Ill_svaba_5319:HG2_Ill_manta_1170:HG2_Ill_SpiralSDKrefine_11956:HG2_Ill_SVrefine2DISCOVARplusDovetail_9231:HG2_Ill_MetaSV_3485:HG2_Ill_GATKHCSBGrefine_2795:HG2_Ill_Cortex_6072:HG2_Ill_250bpfermikitraw_5792:HG2_Ill_150bpfermikitraw_5365:HG2_10X_SVrefine210Xhap12_3114:HG2_PB_SVrefine2Falcon1plusDovetail_8577:HG2_PB_PB10Xdip_22608:HG2_PB_PB10Xdip_22607:HG2_Ill_breakscan11_3412:HG3_PB_pbsv_4121;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3114:HG2_Ill_150bpfermikitraw_5365:HG2_Ill_250bpfermikitraw_5792:HG2_Ill_Cortex_6072:HG2_Ill_GATKHCSBGrefine_2795:HG2_Ill_MetaSV_3485:HG2_Ill_SVrefine2DISCOVARplusDovetail_9231:HG2_Ill_SpiralSDKrefine_11956:HG2_Ill_manta_1170:HG2_Ill_svaba_5319:HG2_PB_SVrefine2Falcon2Bionano_2026:HG2_PB_SVrefine2PB10Xhap12_3105:HG2_PB_SVrefine2PBcRplusDovetail_7956:HG3_Ill_Cortex_2597:HG3_Ill_GATKHCSBGrefine_2794:HG3_Ill_MetaSV_3646:HG3_Ill_SVrefine2DISCOVARDovetail_3219:HG3_Ill_Spiral_4550:HG3_Ill_manta_940:HG3_Ill_svaba_5406:HG4_Ill_250bpfermikitraw_5869:HG4_Ill_Cortex_2580:HG4_Ill_GATKHCSBGrefine_2932:HG4_Ill_MetaSV_3639:HG4_Ill_SVrefine2DISCOVARDovetail_3200:HG4_Ill_manta_1023:HG4_Ill_svaba_5434:HG4_PB_SVrefine2Falcon1Dovetail_2587:HG4_PB_SVrefine2PBcRDovetail_2164;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0731707;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.200608;PBcalls=13;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=21;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=162;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:7754688-7754688;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3935.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:61:1/1:5:20:3:33:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr4	8296330	HG2_PB_SVrefine2PB10Xhap12_3112	T	TCCATCCATCCATCCACCCACCCACCCACCCACCCACCTATCCGCCCATCCATTCACCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATACATCTGTCCATCCATCCATCCACCCACCCACCTATCCACCCATCCATTCACCCATCCATTCATCCATCCGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACTTATCCACCCATCCACCCACCCATCCATCTATCCATTCACCCATCCATTCACTCATTCATCCGTCCATCCATCCACCCACCCACCCATCCACCCACCTATCCATCCATCTATCCATTCACCCACCCATCCATCCATCCATCCACCCATCCATCCAATCATCCATTCACCCACCCACTCATCCATCCATCCATCCATCCATCCATCCACCATCCATCCACCCACACCTTTCTATCCATCCATCCACCCACCCCCACCCATCTTTCCACCCACCCATTTACCATCCATCCATCCATCCACCTATCCACCCACCCATCCATCCATCCATCCACCCATCCATCCAATCATCCATTCACCCACCCACTCATCCATCCATCCATCCATCCATCCACCATCCATCCACCCACACCTTTCTATCCATCCATCTACCCACCCCCACCCATCTTTCCACCCACCCATATACCATCCATCCATCCATCCATCCATCCATCCACTTATCCACCCATCCACCCACCCATCTATCCATCCATTCACCCATCCATTCACTCATTCATCCATCCATCCATCTGCCCACCCAGCCACCCATCCATCCACCCACCCACCCATCCACCCACACACCCATCCATCCACCCACCCATTTACCATCCATCCATCCATCCATCCATCCACTTATCCACCCATCCACCCACCCATCCATCTATCCATCCATTGACCCATCCATTCACTCATTCATCCGTCCATACATCCGCCCACCCAGCCACCCATCCATCCACCCACCCATCCACCCACACACCCATCCATCCACCCACCTATCCATCCATCTATCCATTCACCCACCCACCCATCCATCCATCCATCCACCCATCCATCCAATCATCCATTCATCCATCCACTCATCCATCCATCCATCCATCCATCCATCCATCCACCATCCATCCACCCACACCTTTCTAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3111:HG2_PB_pbsv_4231:HG3_PB_pbsv_4126:HG4_PB_HySA_6306:HG2_PB_HySA_7939:HG2_PB_PB10Xdip_22648:HG2_PB_PB10Xdip_22647:HG3_PB_SVrefine2Falcon1Dovetail_2666:HG2_PB_SVrefine2PB10Xhap12_3112:HG2_PB_SVrefine2PBcRplusDovetail_7959:HG2_PB_SVrefine2Falcon2Bionano_2032:HG4_PB_SVrefine2Falcon1Dovetail_2593:HG2_PB_SVrefine2Falcon1plusDovetail_8583:HG3_PB_SVrefine2PBcRDovetail_1984:HG3_Ill_SVrefine2DISCOVARDovetail_3222;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3112;NumExactMatchSVs=1;ClusterMaxShiftDist=0.208996;ClusterMaxSizeDiff=0.208087;ClusterMaxEditDist=0.285325;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1168;DistBack=43;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=442;REFWIDENED=4:8296331-8296772;PctSeqSimilarity=0.9866;PctSizeSimilarity=0.9974;PctRecOverlap=0.9445;SizeDiff=-3;StartDistance=-64;EndDistance=-64;GTMatch=0;TruScore=97;MatchId=3938.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:67:1/1:0:18:3:24:./.:0:0:0:0:./.:1:12:0/1:15:96:.:1192:.
chr4	8554126	HG2_Ill_GATKHC_6946	C	CCTGCAACTTTCCTGGAGTTCTCTCCCTGCCAAGGGCATCCCCATCCTCCTGACTGTCCAACTCAAACCCTCAGAAGCATCTGTGGCTTCTGTTGCTCCGTCCATGACTTAAGTCCCTCTCATGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3125:HG2_PB_pbsv_4233:HG2_PB_HySA_7944:HG4_PB_pbsv_4262:HG4_Ill_GATKHC_7055:HG4_Ill_GATKHCSBGrefine_2940:HG2_Ill_GATKHC_6946:HG2_Ill_GATKHCSBGrefine_2803:HG2_Ill_SVrefine2DISCOVARplusDovetail_9235;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2803:HG2_Ill_GATKHC_6946:HG4_Ill_GATKHCSBGrefine_2940:HG4_Ill_GATKHC_7055;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0622568;ClusterMaxSizeDiff=0.0620155;ClusterMaxEditDist=0.241509;PBcalls=3;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=124;DistBack=6;DistForward=13076;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=126;REFWIDENED=4:8554103-8554228;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3939.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:34:./.:16:15:25:17:./.:0:0:0:0:0/1:19:16:./.:.:.:.:.:.
chr4	10632678	HG2_PB_PB10Xdip_21201	A	CGGAATCAGCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAACAGGGAATCCTTTCCCCATTGCTGGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTGAAGGGTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTGTGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCGCTTGGTGCAGAGCTGAGTTCAATTCCTGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAATATTTAGGATAGTTAGCTCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGTGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCAGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCCCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2674:HG2_PB_PB10Xdip_21201:HG2_PB_SVrefine2PB10Xhap12_3136:HG2_PB_SVrefine2Falcon1plusDovetail_8596;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_21201;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00297079;ClusterMaxSizeDiff=0.0026407;ClusterMaxEditDist=0.00991408;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6050;DistBack=1297;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:10632679-10632694;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9957;PctRecOverlap=0.9957;SizeDiff=-26;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3942.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:39:0|1:25:4:7:22:./.:0:0:0:0:0/1:28:9:0/1:193:634:.:.:.
chr4	10722278	HG4_PB_SVrefine2Falcon1Dovetail_2605	T	TAAAGAACTGAACAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1998:HG4_PB_pbsv_4286:HG2_PB_pbsv_4258:HG2_PB_SVrefine2PBcRplusDovetail_7980:HG3_PB_HySA_6500:HG3_PB_pbsv_4150:HG2_PB_SVrefine2Falcon1plusDovetail_8599:HG4_PB_HySA_6342:HG3_PB_SVrefine2Falcon1Dovetail_2676:HG4_PB_SVrefine2Falcon1Dovetail_2605:HG2_PB_SVrefine2PBcRplusDovetail_7979;NumClusterSVs=11;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_2605;NumExactMatchSVs=1;ClusterMaxShiftDist=0.140969;ClusterMaxSizeDiff=0.140969;ClusterMaxEditDist=0.197002;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=221;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=4:10722274-10722293;PctSeqSimilarity=0.9886;PctSizeSimilarity=0.9774;PctRecOverlap=0.9819;SizeDiff=5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3943.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:36:0|1:31:3:5:27:./.:0:0:0:0:0/1:23:9:./.:.:.:.:.:.
chr4	10725521	HG2_Ill_GATKHC_6978	A	AGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGATCGAGGGAGAGAGAGAAGAGAAAGAGAGATC	20	PASS	ClusterIDs=HG3_PB_pbsv_4151:HG2_Ill_breakscan11_3414:HG4_Ill_Krunchall_6151:HG4_Ill_GATKHC_7084:HG4_Ill_GATKHCSBGrefine_2964:HG4_Ill_250bpfermikitraw_5912:HG3_Ill_Spiral_4583:HG3_Ill_GATKHC_7013:HG3_Ill_GATKHCSBGrefine_2822:HG3_Ill_250bpfermikitraw_5657:HG2_Ill_SpiralSDKrefine_11980:HG2_Ill_Krunchall_5942:HG2_Ill_GATKHC_6978:HG2_Ill_GATKHCSBGrefine_2825:HG2_Ill_250bpfermikitraw_5835:HG3_Ill_svaba_5457:HG2_Ill_svaba_5367:HG2_PB_pbsv_4259:HG4_PB_pbsv_4287:HG4_PB_HySA_6343;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5835:HG2_Ill_GATKHCSBGrefine_2825:HG2_Ill_GATKHC_6978:HG2_Ill_Krunchall_5942:HG2_Ill_SpiralSDKrefine_11980:HG3_Ill_250bpfermikitraw_5657:HG3_Ill_GATKHCSBGrefine_2822:HG3_Ill_GATKHC_7013;NumExactMatchSVs=8;ClusterMaxShiftDist=0.213333;ClusterMaxSizeDiff=0.213333;ClusterMaxEditDist=0.278146;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=2708;DistForward=20;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=37;REFWIDENED=4:10725507-10725543;PctSeqSimilarity=0.9855;PctSizeSimilarity=0.971;PctRecOverlap=0.971;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3944.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:38:0|1:38:2:0:32:./.:0:0:0:0:0/1:22:17:./.:.:.:.:.:.
chr4	10965573	HG2_Ill_Cortex_6095	T	TGCACACACTTGTATACACGTGAACACAGGTGCATGCACACAAACACACAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3415:HG2_PB_pbsv_4260:HG4_PB_pbsv_4288:HG4_Ill_svaba_5484:HG4_Ill_Krunchall_6153:HG4_Ill_GATKHC_7087:HG4_Ill_GATKHCSBGrefine_2965:HG4_Ill_Cortex_2590:HG4_Ill_250bpfermikitraw_5915:HG4_Ill_150bpfermikitraw_5625:HG2_Ill_svaba_5369:HG2_Ill_SpiralSDKrefine_11983:HG2_Ill_Krunchall_5946:HG2_Ill_GATKHC_6983:HG2_Ill_GATKHCSBGrefine_2826:HG2_Ill_Cortex_6095:HG2_Ill_250bpfermikitraw_5841:HG2_Ill_150bpfermikitraw_5412;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5412:HG2_Ill_250bpfermikitraw_5841:HG2_Ill_Cortex_6095:HG2_Ill_GATKHCSBGrefine_2826:HG2_Ill_GATKHC_6983:HG2_Ill_Krunchall_5946:HG2_Ill_SpiralSDKrefine_11983:HG2_Ill_svaba_5369:HG4_Ill_150bpfermikitraw_5625:HG4_Ill_250bpfermikitraw_5915:HG4_Ill_Cortex_2590:HG4_Ill_GATKHCSBGrefine_2965:HG4_Ill_GATKHC_7087:HG4_Ill_Krunchall_6153:HG4_Ill_svaba_5484;NumExactMatchSVs=15;ClusterMaxShiftDist=0.114286;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.18018;PBcalls=2;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=10816;DistForward=14340;DistMin=10816;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=9;REFWIDENED=4:10965572-10965583;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3945.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:34:0|1:33:4:2:27:./.:0:0:0:0:0/1:23:11:./.:.:.:.:.:.
chr4	11456664	HG2_Ill_SVrefine2DISCOVARplusDovetail_9255	A	AGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGAAGAAGAAGAAGAAGGAGAAGAAGAGGAAG	20	PASS	ClusterIDs=HG3_PB_HySA_6506:HG2_PB_HySA_7998:HG2_PB_PB10Xdip_21247:HG2_PB_SVrefine2Falcon2Bionano_2047:HG3_PB_SVrefine2Falcon1Dovetail_2679:HG2_Ill_SVrefine2DISCOVARplusDovetail_9255:HG4_Ill_SVrefine2DISCOVARDovetail_3228:HG2_PB_SVrefine2PBcRplusDovetail_7984:HG4_Ill_GATKHC_7090:HG4_PB_SVrefine2PBcRDovetail_2181:HG2_PB_HySA_7999:HG2_PB_SVrefine2Falcon1plusDovetail_8601:HG2_PB_SVrefine2PB10Xhap12_3140:HG3_PB_pbsv_4155:HG2_PB_pbsv_4264:HG2_10X_SVrefine210Xhap12_3145;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9255:HG2_PB_SVrefine2Falcon2Bionano_2047;NumExactMatchSVs=2;ClusterMaxShiftDist=0.176471;ClusterMaxSizeDiff=0.176471;ClusterMaxEditDist=0.345178;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=108;DistBack=41;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=209;REFWIDENED=4:11456491-11456699;PctSeqSimilarity=0.9638;PctSizeSimilarity=0.973;PctRecOverlap=0.982;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=97;MatchId=3947.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:0:21:2:23:./.:0:0:0:0:0/1:8:38:./.:.:.:.:.:.
chr4	12408976	HG2_PB_PB10Xdip_21319	C	AGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_21319:HG4_PB_pbsv_4298:HG4_PB_HySA_6363:HG3_PB_HySA_6521:HG2_PB_HySA_8023;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_21319;NumExactMatchSVs=1;ClusterMaxShiftDist=0.138614;ClusterMaxSizeDiff=0.138614;ClusterMaxEditDist=0.226804;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=51;DistBack=21082;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:12408975-12408977;PctSeqSimilarity=0.9455;PctSizeSimilarity=0.8947;PctRecOverlap=0.8947;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=91;MatchId=3948.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:0|1:33:1:0:26:./.:0:0:0:0:0/1:24:3:./.:.:.:.:.:.
chr4	13228194	HG2_10X_SVrefine210Xhap12_3151	A	AGCTGTGCAGATTCTTGGTGGCCACTCAGCTGGAGGCTGCCTAAGACTACTGATTTCCTGAGGGAGGGGCGGCTGCCATCACTGCCGCTGTCTGCTACCTAAGGTAACTGAGCTCCCCAGGGAAGTCAGCGGCCATCACCATGGCTCCCTTCAGCCTAAGACAACTGAGCTCCCAGAGGGGAGGGGCAGCAGTCATTAAGGCAGTTCCAGGCTGCTGACTTTCCCCTGCCAGTGCCAGGGAGACTCAACGGTTTGGAGTCAGGAGGAATACCCCAAGCGCACCACAACAGCTGTGGCAGATCGTGGCCAGACTGCCTCTTTAGGCTGGACCCTGACCTATCCCTTTTCACCAGGCTGGGCCTCCCTGCAGGATTTTCAGCAACTCTAGCCAGGGGTTTAGGGACAGAATTCTGATCTCCCTGGGACTGAGCCCCTGGGGAGAGGGGCAGCCGTGGTATCCACAGATCAGCAAACTTAGTCTTTCCTCCTGCTGGCTCTGAGGACTCCAGGCAGTCCAGACAAGTGGGATTCCCACCAGCGCAGCACACCTGCTCTGCCAGGAGGTAGCTGGAATGCTTCGTTAAGCAGGTCCCAGATCCCGTGCCTCCTGACTGGGTGAGACCCCTCAACAGGGGTCACCAAACACCTTATACAGTAGAGTTCCTGCTGGCATTAGTTGGTGCCTGTGATGGTTGATACTGAGTGTCAACTTGATTGGATTGAAGGATGCAAAGTATTGATCCTGAGTGTGTTTGTGAGGGCCTTGCCAAAGGAGATTAACATTTGAGTCAGTGGGCTGGGGAAGGCAGACCCACCCTTAATCCTGTGGGCACCATCTAATCAGCTGCCAGCAAATATAAAGCAGGCAGAAAAAATGTGAAAAGGCGAGACTGGCCAAGCCTCCCAGCCTACATCTTTCTCCCATGCTGGATGCTCCCTGACCTCGAACATCAGACTCCAAGTTCTTCAGTTTTGAGACTCAGACTGGCTCCCCTTTCTCCTCAGGCTTGCAGACAGCCTATTGTGGGACTTTGTGATTGTGTAAGTAAATACTTAATAAGCTCCTGTCTATCTATCTATTTATCTATACACACACAATACATATAGATAGATAGATATAGATATATATCCTATTAGTTCTGTCTCTTAGAGAACGCTGACTAATACAGATTTTGCTACCAGGAGTAGGGTGTTTGTTGCTTGATATGATTAGACCCCGAAATGCTAAGGACTCTACTTCTAATAGTATGGAGAACACTGGTAGTCCTTGTTGTGAACTGTTTAGAGAGTTATGCAAAATAAATTAATTTGACATTCTTGATTCACTGCTCATGAGAGGCAGAGTTTAGTGACTCTATACATAACACCTTTGGCCATATGTGGAGAACCAAGGAACATAATGAAGCTGGTTGGTTGCTCCTAAGTTCAGTGGACAAAACAATGAAAGAAAATGAAGAACTCACAGATTCTGTCTCCCGGCTTCAGAAGCAGATACTGAGCCTCAAATCTGCTAAGATTGCCCTGAGTGAGAGTCTTATCTCCTATAGGCAAAGAGCTGAAATTGTGGAAAAACAGACACAAGCTCTTATCATGCAAGTGGCTGACCTGCAATGAAAGATGCATGCACAGCCTCACCACGTGTATATTATTAAAGTGAGGGCACTGGTTGCAAAAGAATGGGACCCTGCAACTTGGAATGGGGACATGTGCGAGGACCCTGATGAAGCTGGGGTCACTGAGTTTGTAAACTCTGATGAATCTTTTTTGCCAGAAGGAGCAGCCCAATCCAGGCAGGACTACAAATGGTCCAGACCCCTCAGGAATGGATGTTTGGGTCACTCCACCAGGAAAAAAACCACAACCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8612:HG2_PB_PB10Xdip_21384:HG4_PB_pbsv_4304:HG2_PB_pbsv_4278:HG2_PB_HySA_8039:HG3_PB_assemblyticsfalcon_18992:HG4_PB_assemblyticsfalcon_18687:HG2_PB_SVrefine2Falcon2Bionano_2052:HG4_Ill_SVrefine2DISCOVARDovetail_3235:HG2_PB_SVrefine2PBcRplusDovetail_7993:HG2_Ill_SVrefine2DISCOVARplusDovetail_9263:HG2_10X_SVrefine210Xhap12_3151:HG2_PB_SVrefine2PB10Xhap12_3150:HG3_PB_SVrefine2Falcon1Dovetail_2691:HG4_PB_SVrefine2Falcon1Dovetail_2621;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3151:HG2_Ill_SVrefine2DISCOVARplusDovetail_9263:HG2_PB_SVrefine2PBcRplusDovetail_7993:HG4_Ill_SVrefine2DISCOVARDovetail_3235;NumExactMatchSVs=4;ClusterMaxShiftDist=0.062206;ClusterMaxSizeDiff=0.0616832;ClusterMaxEditDist=0.161715;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=1863;DistBack=11855;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=4:13228195-13228206;PctSeqSimilarity=0.9992;PctSizeSimilarity=1;PctRecOverlap=0.9946;SizeDiff=0;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=99;MatchId=3950.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:29:0|1:20:0:0:21:./.:0:0:0:0:0/1:18:12:0/1:54:151:.:1843:.
chr4	13762843	HG2_Ill_GATKHCSBGrefine_2839	G	GGGGGGCTGACCCCCCCACCTCCCTCCCAGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCTGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGCCCTGGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7994:HG2_PB_SVrefine2Falcon1plusDovetail_8613:HG3_PB_pbsv_4171:HG4_PB_assemblyticsfalcon_18689:HG4_PB_SVrefine2PBcRDovetail_2187:HG4_Ill_GATKHCSBGrefine_2976:HG3_Ill_Spiral_4603:HG3_Ill_GATKHCSBGrefine_2844:HG2_Ill_GATKHCSBGrefine_2839:HG4_PB_SVrefine2Falcon1Dovetail_2622:HG2_PB_PB10Xdip_21463:HG2_PB_PB10Xdip_21462:HG2_PB_pbsv_4279:HG2_PB_SVrefine2PB10Xhap12_3151:HG4_PB_pbsv_4306:HG2_PB_SVrefine2Falcon2Bionano_2053:HG2_Ill_SVrefine2DISCOVARplusDovetail_9264:HG3_PB_SVrefine2Falcon1Dovetail_2692;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2839:HG3_Ill_GATKHCSBGrefine_2844:HG3_Ill_Spiral_4603:HG4_Ill_GATKHCSBGrefine_2976;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0899654;ClusterMaxSizeDiff=0.0761246;ClusterMaxEditDist=0.273038;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=146;DistBack=-47;DistForward=8;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6518;REFWIDENED=4:13771182-13762890;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3951.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:1:25:1:25:./.:0:0:0:0:1/1:0:22:./.:.:.:.:.:.
chr4	14727912	HG4_Ill_Krunchall_6194	T	TTTACATTAATTTTACATTTACATTTACATTACATTTAATTAACAATTTACATTACATTACATTACATTTAATTAACAATTAAATTTACATTTACA	20	PASS	ClusterIDs=HG4_PB_pbsv_4309:HG4_PB_HySA_6392:HG2_PB_pbsv_4283:HG4_PB_assemblyticsfalcon_18696:HG3_PB_assemblyticsfalcon_19002:HG2_PB_assemblyticsPBcR_18469:HG3_PB_HySA_6551:HG4_PB_SVrefine2PBcRDovetail_2188:HG4_PB_SVrefine2Falcon1Dovetail_2623:HG4_Ill_svaba_5526:HG4_Ill_manta_1039:HG4_Ill_SVrefine2DISCOVARDovetail_3240:HG4_Ill_Krunchall_6194:HG4_Ill_GATKHCSBGrefine_2978:HG4_Ill_Cortex_2594:HG4_Ill_250bpfermikitraw_5951:HG4_Ill_150bpfermikitraw_5666:HG3_PB_SVrefine2Falcon1Dovetail_2693:HG3_Ill_svaba_5504:HG3_Ill_manta_956:HG3_Ill_Spiral_4615:HG3_Ill_SVrefine2DISCOVARDovetail_3248:HG3_Ill_Krunchall_5871:HG3_Ill_GATKHCSBGrefine_2846:HG3_Ill_Cortex_2609:HG3_Ill_250bpfermikitraw_5688:HG3_Ill_150bpfermikitraw_5505:HG2_PB_SVrefine2PBcRplusDovetail_7995:HG2_PB_SVrefine2PB10Xhap12_3152:HG2_PB_SVrefine2Falcon2Bionano_2054:HG2_PB_SVrefine2Falcon1plusDovetail_8614:HG2_Ill_svaba_5411:HG2_Ill_manta_1183:HG2_Ill_SpiralSDKrefine_12008:HG2_Ill_SVrefine2DISCOVARplusDovetail_9270:HG2_Ill_Krunchall_5986:HG2_Ill_GATKHCSBGrefine_2842:HG2_Ill_Cortex_6111:HG2_Ill_250bpfermikitraw_5879:HG2_Ill_150bpfermikitraw_5456:HG2_10X_SVrefine210Xhap12_3153:HG2_PB_PB10Xdip_21485:HG2_PB_PB10Xdip_21484:HG2_Ill_breakscan11_3417:HG2_PB_HySA_8054:HG3_PB_pbsv_4173;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3153:HG2_Ill_150bpfermikitraw_5456:HG2_Ill_250bpfermikitraw_5879:HG2_Ill_Cortex_6111:HG2_Ill_GATKHCSBGrefine_2842:HG2_Ill_Krunchall_5986:HG2_Ill_SVrefine2DISCOVARplusDovetail_9270:HG2_Ill_SpiralSDKrefine_12008:HG2_Ill_manta_1183:HG2_Ill_svaba_5411:HG2_PB_SVrefine2Falcon1plusDovetail_8614:HG2_PB_SVrefine2Falcon2Bionano_2054:HG2_PB_SVrefine2PB10Xhap12_3152:HG2_PB_SVrefine2PBcRplusDovetail_7995:HG3_Ill_150bpfermikitraw_5505:HG3_Ill_250bpfermikitraw_5688:HG3_Ill_Cortex_2609:HG3_Ill_GATKHCSBGrefine_2846:HG3_Ill_Krunchall_5871:HG3_Ill_SVrefine2DISCOVARDovetail_3248:HG3_Ill_Spiral_4615:HG3_Ill_manta_956:HG3_Ill_svaba_5504:HG3_PB_SVrefine2Falcon1Dovetail_2693:HG4_Ill_150bpfermikitraw_5666:HG4_Ill_250bpfermikitraw_5951:HG4_Ill_Cortex_2594:HG4_Ill_GATKHCSBGrefine_2978:HG4_Ill_Krunchall_6194:HG4_Ill_SVrefine2DISCOVARDovetail_3240:HG4_Ill_manta_1039:HG4_Ill_svaba_5526:HG4_PB_SVrefine2Falcon1Dovetail_2623:HG4_PB_SVrefine2PBcRDovetail_2188;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0515464;ClusterMaxSizeDiff=0.0412371;ClusterMaxEditDist=0.229167;PBcalls=18;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=95;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=4:14727902-14727915;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3952.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:69:./.:0:1:0:1:./.:0:0:0:0:1/1:0:40:./.:.:.:.:.:.
chr4	14798389	HG2_PB_pbsv_4285	C	CGCACCACACACACGTATATATTATATATATATATATATATATATATCATATATATATA	20	PASS	ClusterIDs=HG2_PB_pbsv_4285:HG2_Ill_manta_1184;NumClusterSVs=2;ExactMatchIDs=HG2_PB_pbsv_4285;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.155172;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=576;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:14798388-14798390;PctSeqSimilarity=0.925;PctSizeSimilarity=0.9655;PctRecOverlap=0.9492;SizeDiff=2;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=94;MatchId=3953.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:./.:23:6:9:18:./.:0:0:0:0:0/1:21:5:./.:.:.:.:.:.
chr4	14916084	HG2_PB_SVrefine2Falcon2Bionano_2056	C	CTATATATATAGCTATATATATATACTATATATTGAGAGCTATATATATAGCTATATATATACTATATATTGAGAGCTATATATACGCTATATAGCTATATATATAGCATACATATAGTATATATACATATATATGTATATATACTATATGTATATATGTATATATACATATATATGTATATATACATATATATGTATATATACTATATGTATATATGTATATATACATATATATGTATATATACATATATACATATAGTATATATACATATATATGTATATATACTATATGTATATATGTATATATACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8615:HG2_PB_HySA_8061:HG2_PB_pbsv_4286:HG2_PB_PB10Xdip_21488:HG2_PB_PB10Xdip_21487:HG4_Ill_GATKHCSBGrefine_2982:HG2_PB_SVrefine2PBcRplusDovetail_7996:HG2_PB_SVrefine2PB10Xhap12_3153:HG2_PB_SVrefine2Falcon2Bionano_2056:HG3_PB_SVrefine2Falcon1Dovetail_2694:HG3_PB_pbsv_4176:HG2_Ill_SVrefine2DISCOVARplusDovetail_9271:HG4_PB_SVrefine2Falcon1Dovetail_2624;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2056:HG2_PB_SVrefine2PB10Xhap12_3153:HG2_PB_SVrefine2PBcRplusDovetail_7996;NumExactMatchSVs=3;ClusterMaxShiftDist=0.213333;ClusterMaxSizeDiff=0.21037;ClusterMaxEditDist=0.293447;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=69334;DistForward=106;DistMin=106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=501;REFWIDENED=4:14916085-14916585;PctSeqSimilarity=0.9637;PctSizeSimilarity=0.9773;PctRecOverlap=0.5566;SizeDiff=7;StartDistance=-134;EndDistance=-134;GTMatch=1;TruScore=83;MatchId=3954.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:90:1/1:3:31:1:9:./.:0:0:0:0:./.:1:16:1/1:1:48:.:.:.
chr4	15617071	HG4_Ill_SVrefine2DISCOVARDovetail_3243	G	GTGTTTAGCTCAAGGTTTGTGAGTGCACCAATCGACACTCTGTATCTAGCTGCTCTGGTGGGGCCTTGGAGAACCTTTATGTCTAGCTCAGGGATTGTAAATACACCAATCGGCACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAGGGTTTGTGAGTGCACCAATCAACACTCTGTATCTAACTACTCTGGTGGGGCCTTGGAGAACATTTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2627:HG2_PB_pbsv_4289:HG2_PB_HySA_8068:HG4_PB_pbsv_4314:HG3_PB_HySA_6567:HG3_Ill_MetaSV_3661:HG2_Ill_MetaSV_3499:HG2_PB_PB10Xdip_21622:HG2_PB_PB10Xdip_21621:HG2_10X_SVrefine210Xhap12_3158:HG4_PB_SVrefine2PBcRDovetail_2191:HG4_Ill_SVrefine2DISCOVARDovetail_3243:HG3_PB_SVrefine2Falcon1Dovetail_2699:HG3_Ill_SVrefine2DISCOVARDovetail_3249:HG2_PB_SVrefine2PBcRplusDovetail_7998:HG2_PB_SVrefine2PB10Xhap12_3157:HG2_PB_SVrefine2Falcon2Bionano_2059:HG2_PB_SVrefine2Falcon1plusDovetail_8618:HG2_Ill_SVrefine2DISCOVARplusDovetail_9273;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9273:HG2_PB_SVrefine2Falcon1plusDovetail_8618:HG2_PB_SVrefine2Falcon2Bionano_2059:HG2_PB_SVrefine2PB10Xhap12_3157:HG2_PB_SVrefine2PBcRplusDovetail_7998:HG3_Ill_SVrefine2DISCOVARDovetail_3249:HG3_PB_SVrefine2Falcon1Dovetail_2699:HG4_Ill_SVrefine2DISCOVARDovetail_3243:HG4_PB_SVrefine2PBcRDovetail_2191;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0691057;ClusterMaxSizeDiff=0.0650406;ClusterMaxEditDist=0.238569;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=238;DistBack=69729;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=233;REFWIDENED=4:15617072-15617304;PctSeqSimilarity=0.9962;PctSizeSimilarity=1;PctRecOverlap=0.8954;SizeDiff=0;StartDistance=-25;EndDistance=-25;GTMatch=0;TruScore=96;MatchId=3955.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:78:1/1:1:17:1:16:./.:0:0:0:0:1/1:0:19:./.:.:.:.:.:.
chr4	16741212	HG2_PB_SVrefine2Falcon2Bionano_2061	A	TATATATATATATATATATATATATATGTATATATATATGTATATATATGTGTATATAT	20	PASS	ClusterIDs=HG2_PB_pbsv_4296:HG4_Ill_SVrefine2DISCOVARDovetail_3252:HG2_PB_SVrefine2Falcon2Bionano_2061:HG2_Ill_SVrefine2DISCOVARplusDovetail_9279:HG4_PB_SVrefine2PBcRDovetail_2194:HG4_PB_pbsv_4318;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9279:HG2_PB_SVrefine2Falcon2Bionano_2061:HG4_Ill_SVrefine2DISCOVARDovetail_3252;NumExactMatchSVs=3;ClusterMaxShiftDist=0.145161;ClusterMaxSizeDiff=0.126984;ClusterMaxEditDist=0.232558;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=0;DistForward=40;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:16741211-16741213;PctSeqSimilarity=0.9662;PctSizeSimilarity=0.9667;PctRecOverlap=0.7541;SizeDiff=-2;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=89;MatchId=3956.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:30:0|1:35:6:2:23:./.:0:0:0:0:0/1:16:11:./.:.:.:.:.:.
chr4	17415779	HG3_Ill_SVrefine2DISCOVARDovetail_3258	A	AGTGCTGACTGGTGCATTTACAATCCTCCAGCTAGACATAAAAGTTCTCTAAGTCCCCACTGGATTAGCTAGACACAGAACACTGATTGGTGTGCTTACAAACCTTGAGCTAGACACAGG	20	PASS	ClusterIDs=HG2_PB_HySA_8080:HG3_PB_assemblyticsfalcon_19033:HG4_PB_assemblyticsfalcon_18725:HG2_PB_SVrefine2Falcon1plusDovetail_8622:HG2_PB_HySA_8081:HG2_PB_pbsv_4301:HG3_PB_HySA_6583:HG3_PB_SVrefine2Falcon1Dovetail_2705:HG4_PB_SVrefine2Falcon1Dovetail_2633:HG4_Ill_GATKHC_7169:HG4_Ill_GATKHCSBGrefine_2993:HG3_Ill_SVrefine2DISCOVARDovetail_3258:HG3_Ill_GATKHC_7102:HG3_Ill_GATKHCSBGrefine_2861:HG2_Ill_GATKHC_7064:HG2_Ill_GATKHCSBGrefine_2854:HG2_10X_SVrefine210Xhap12_3167;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3167:HG2_Ill_GATKHCSBGrefine_2854:HG2_Ill_GATKHC_7064:HG3_Ill_GATKHCSBGrefine_2861:HG3_Ill_GATKHC_7102:HG3_Ill_SVrefine2DISCOVARDovetail_3258:HG4_Ill_GATKHCSBGrefine_2993:HG4_Ill_GATKHC_7169;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0421941;ClusterMaxSizeDiff=0.0414938;ClusterMaxEditDist=0.182573;PBcalls=9;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=119;DistBack=18957;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=343;REFWIDENED=4:17415493-17415835;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3957.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:24:0|1:33:5:2:17:./.:0:0:0:0:0/1:25:23:./.:.:.:.:.:.
chr4	17581801	HG2_Ill_MetaSV_3502	A	ATATATATGTGTATATATATATATATATATATATATATATATATATATACACATATACATATATATATATATATACACACACATATACATATATATATATATATACATACACATATATATATATATATATATATATATATATATATATATG	20	PASS	ClusterIDs=HG2_PB_HySA_8083:HG3_PB_SVrefine2Falcon1Dovetail_2708:HG4_PB_HySA_6415:HG2_PB_SVrefine2Falcon1plusDovetail_8625:HG4_Ill_MetaSV_3662:HG2_Ill_MetaSV_3502:HG2_PB_pbsv_4305:HG3_PB_pbsv_4197:HG3_PB_assemblyticsfalcon_19037:HG4_PB_pbsv_4328;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_MetaSV_3502;NumExactMatchSVs=1;ClusterMaxShiftDist=0.237037;ClusterMaxSizeDiff=0.237037;ClusterMaxEditDist=0.284644;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=150;DistBack=12;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=4:17581789-17581808;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9733;PctRecOverlap=0.9007;SizeDiff=4;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=95;MatchId=3958.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:25:0|1:32:2:1:22:./.:0:0:0:0:0/1:22:9:./.:.:.:.:.:.
chr4	17655546	HG2_Ill_svaba_5441	A	AGGGGGAGAGAGAGAGAGAGGGAGAGGGAGGGAGGGGGGAGGGGGGGGGGGGGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2198:HG3_PB_pbsv_4198:HG2_PB_pbsv_4306:HG4_Ill_svaba_5559:HG3_Ill_svaba_5544:HG2_Ill_svaba_5441:HG2_PB_PB10Xdip_21706:HG2_PB_PB10Xdip_21707:HG3_PB_HySA_6589:HG4_Ill_GATKHC_7174:HG4_Ill_SVrefine2DISCOVARDovetail_3260:HG4_Ill_GATKHCSBGrefine_2995:HG3_Ill_GATKHC_7109:HG3_CG_vcfBeta_2462:HG2_Ill_GATKHC_7068:HG2_PB_HySA_8087:HG4_PB_HySA_6417:HG2_PB_SVrefine2PBcRplusDovetail_8005:HG2_PB_SVrefine2Falcon2Bionano_2064:HG4_PB_SVrefine2Falcon1Dovetail_2634:HG2_PB_SVrefine2PB10Xhap12_3163:HG3_PB_SVrefine2Falcon1Dovetail_2709:HG2_10X_SVrefine210Xhap12_3168;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_svaba_5441:HG3_Ill_svaba_5544:HG4_Ill_svaba_5559;NumExactMatchSVs=3;ClusterMaxShiftDist=0.264151;ClusterMaxSizeDiff=0.264151;ClusterMaxEditDist=0.30303;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=1;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=4;NumTechsExact=1;SVLEN=53;DistBack=-1;DistForward=5;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=4:17655543-17655553;PctSeqSimilarity=0.9421;PctSizeSimilarity=0.9138;PctRecOverlap=0.8814;SizeDiff=-5;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=91;MatchId=3959.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:1:43:0:17:./.:0:0:0:0:./.:0:3:./.:.:.:.:.:.
chr4	18162679	HG2_PB_SVrefine2Falcon1plusDovetail_8626	A	AAAGGCTTTTCTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGAGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAAAGTAATCCAGCATATAAATAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAACTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGG	10	PASS	ClusterIDs=HG3_PB_HySA_6591:HG3_PB_pbsv_4199:HG2_PB_HySA_8090:HG2_PB_pbsv_4307:HG4_PB_pbsv_4330:HG3_PB_HySA_6592:HG3_PB_assemblyticsfalcon_19039:HG4_PB_assemblyticsfalcon_18729:HG3_PB_SVrefine2Falcon1Dovetail_2710:HG4_PB_SVrefine2Falcon1Dovetail_2635:HG2_PB_SVrefine2PB10Xhap12_3164:HG2_PB_SVrefine2Falcon1plusDovetail_8626:HG2_PB_HySA_8089;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8626;NumExactMatchSVs=1;ClusterMaxShiftDist=0.08468;ClusterMaxSizeDiff=0.08468;ClusterMaxEditDist=0.183153;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1498;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=4:18162680-18162689;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9993;PctRecOverlap=0.9987;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3960.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:55:0|1:23:0:0:40:./.:0:0:0:0:0/1:34:8:0/1:47:137:.:1486:.
chr4	19010041	HG4_Ill_GATKHCSBGrefine_2996	T	TAAGAAAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2638:HG2_PB_pbsv_4309:HG3_PB_assemblyticsfalcon_19046:HG2_PB_assemblyticsPBcR_18502:HG4_PB_assemblyticsfalcon_18734:HG2_PB_HySA_8096:HG4_PB_pbsv_4333:HG2_PB_SVrefine2PB10Xhap12_3169:HG3_PB_SVrefine2Falcon1Dovetail_2714:HG2_PB_SVrefine2Falcon1plusDovetail_8628:HG4_Ill_GATKHCSBGrefine_2996:HG2_PB_SVrefine2PBcRplusDovetail_8008;NumClusterSVs=12;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_2996;NumExactMatchSVs=1;ClusterMaxShiftDist=0.182371;ClusterMaxSizeDiff=0.182371;ClusterMaxEditDist=0.231003;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=298;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=4:19010042-19010050;PctSeqSimilarity=0.9344;PctSizeSimilarity=0.8765;PctRecOverlap=0.8768;SizeDiff=-42;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=89;MatchId=3961.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:36:0|1:36:2:0:34:./.:0:0:0:0:0/1:16:8:./.:.:.:.:.:.
chr4	19366144	HG4_PB_assemblyticsfalcon_18737	AAACACTGTACT	GAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGCGAGGCCGAGGCGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAGAGAATGGCCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2641:HG3_PB_HySA_6604:HG2_PB_pbsv_4312:HG4_PB_assemblyticsfalcon_18737:HG3_PB_assemblyticsfalcon_19054:HG2_Ill_breakscan11_3419:HG3_PB_pbsv_4206:HG3_PB_SVrefine2Falcon1Dovetail_2719:HG2_PB_SVrefine2Falcon1plusDovetail_8630;NumClusterSVs=9;ExactMatchIDs=HG4_PB_assemblyticsfalcon_18737;NumExactMatchSVs=1;ClusterMaxShiftDist=0.1625;ClusterMaxSizeDiff=0.1625;ClusterMaxEditDist=0.277017;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=305;DistBack=8507;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:19366156-19366143;PctSeqSimilarity=0.9574;PctSizeSimilarity=0.9327;PctRecOverlap=0.9633;SizeDiff=-22;StartDistance=1;EndDistance=12;GTMatch=0;TruScore=95;MatchId=3962.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:44:52:0|1:39:1:3:36:./.:0:0:0:0:0/0:41:2:0/1:11:17:.:.:.
chr4	21265799	HG4_Ill_Krunchall_6252	A	AAGGTTAAGGGGGCTTCTATACTTTCTATGCCTCAAGATTAATGGCAAAGACTCAGATTATGGATGAAAAGTATGGCAGAGTGGGATTTTGAG	20	PASS	ClusterIDs=HG2_PB_HySA_8127:HG4_PB_pbsv_4348:HG2_PB_assemblyticsPBcR_18524:HG2_PB_pbsv_4323:HG3_PB_assemblyticsfalcon_19074:HG3_PB_pbsv_4216:HG2_PB_PB10Xdip_22077:HG2_PB_PB10Xdip_22076:HG2_Ill_breakscan11_3420:HG4_PB_SVrefine2Falcon1Dovetail_2647:HG4_Ill_svaba_5591:HG4_Ill_manta_1052:HG4_Ill_SVrefine2DISCOVARDovetail_3274:HG4_Ill_Krunchall_6252:HG4_Ill_GATKHCSBGrefine_3009:HG4_Ill_Cortex_2599:HG4_Ill_250bpfermikitraw_6007:HG4_Ill_150bpfermikitraw_5720:HG3_Ill_svaba_5572:HG3_Ill_manta_967:HG3_Ill_Spiral_4667:HG3_Ill_SVrefine2DISCOVARDovetail_3285:HG3_Ill_Krunchall_5935:HG3_Ill_GATKHC_7145:HG3_Ill_GATKHCSBGrefine_2873:HG3_Ill_Cortex_2615:HG3_Ill_250bpfermikitraw_5755:HG3_Ill_150bpfermikitraw_5574:HG2_PB_SVrefine2PBcRplusDovetail_8015:HG2_PB_SVrefine2PB10Xhap12_3178:HG2_PB_SVrefine2Falcon2Bionano_2076:HG2_PB_SVrefine2Falcon1plusDovetail_8637:HG2_Ill_svaba_5473:HG2_Ill_manta_1192:HG2_Ill_SpiralSDKrefine_12048:HG2_Ill_SVrefine2DISCOVARplusDovetail_9300:HG2_Ill_Krunchall_6044:HG2_Ill_GATKHC_7102:HG2_Ill_GATKHCSBGrefine_2867:HG2_Ill_Cortex_6127:HG2_Ill_250bpfermikitraw_5946:HG2_Ill_150bpfermikitraw_5517:HG2_10X_SVrefine210Xhap12_3178;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3178:HG2_Ill_150bpfermikitraw_5517:HG2_Ill_250bpfermikitraw_5946:HG2_Ill_Cortex_6127:HG2_Ill_GATKHCSBGrefine_2867:HG2_Ill_GATKHC_7102:HG2_Ill_Krunchall_6044:HG2_Ill_SVrefine2DISCOVARplusDovetail_9300:HG2_Ill_SpiralSDKrefine_12048:HG2_Ill_manta_1192:HG2_Ill_svaba_5473:HG2_PB_SVrefine2Falcon1plusDovetail_8637:HG2_PB_SVrefine2Falcon2Bionano_2076:HG2_PB_SVrefine2PB10Xhap12_3178:HG2_PB_SVrefine2PBcRplusDovetail_8015:HG3_Ill_150bpfermikitraw_5574:HG3_Ill_250bpfermikitraw_5755:HG3_Ill_Cortex_2615:HG3_Ill_GATKHCSBGrefine_2873:HG3_Ill_GATKHC_7145:HG3_Ill_Krunchall_5935:HG3_Ill_SVrefine2DISCOVARDovetail_3285:HG3_Ill_Spiral_4667:HG3_Ill_manta_967:HG3_Ill_svaba_5572:HG4_Ill_150bpfermikitraw_5720:HG4_Ill_250bpfermikitraw_6007:HG4_Ill_Cortex_2599:HG4_Ill_GATKHCSBGrefine_3009:HG4_Ill_Krunchall_6252:HG4_Ill_SVrefine2DISCOVARDovetail_3274:HG4_Ill_manta_1052:HG4_Ill_svaba_5591:HG4_PB_SVrefine2Falcon1Dovetail_2647;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0842105;ClusterMaxSizeDiff=0.0842105;ClusterMaxEditDist=0.192893;PBcalls=13;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=21;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=92;DistBack=12578;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:21265800-21265800;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3964.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:0:12:0:31:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr4	21323342	HG3_Ill_250bpfermikitraw_5756	C	CAGGAGGGAGGCAGTGGGAGAAGTGGGGAAGGAGGGAAGGAAGGAAAGAAGGGAGGGAGGGAGAGAGGAAGGA	20	PASS	ClusterIDs=HG4_PB_HySA_6436:HG2_PB_pbsv_4324:HG4_PB_pbsv_4349:HG2_PB_HySA_8129:HG3_PB_assemblyticsfalcon_19075:HG4_Ill_GATKHC_7206:HG3_Ill_GATKHC_7147:HG3_Ill_250bpfermikitraw_5756:HG2_PB_assemblyticsPBcR_18526:HG2_Ill_GATKHC_7104:HG2_PB_PB10Xdip_22079:HG2_PB_PB10Xdip_22078;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHC_7104:HG2_PB_assemblyticsPBcR_18526:HG3_Ill_250bpfermikitraw_5756:HG3_Ill_GATKHC_7147:HG4_Ill_GATKHC_7206;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0413793;ClusterMaxEditDist=0.193103;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=72;DistBack=41;DistForward=38;DistMin=38;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=82;REFWIDENED=4:21323341-21323425;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3965.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:9:41:1/1:4:15:3:17:./.:0:0:0:0:0/1:3:14:./.:.:.:.:.:.
chr4	21347764	HG2_PB_SVrefine2PB10Xhap12_3179	G	GTATATATATAATATATAATATATAGAAATCTGTAATATATATTATATATATAGAATTATATATATAATATATATTATATATATAATTCTATATATATAATATATATTATATATATAATTCTATATATATAATATATATTATATATATAATTCTATATATATATATATATATATATATTCTATATATATATATATATATATATATAATTCTATATATATATATATTATATATATATATATATAATATATATTATATATATAATTCTATATATATAATATATATTATATATATATTCTATATATAATATATATTATATATATAATTCTATATATATAATATATATTATATATATAATTTATATATATAATATATATTATATATATAATTC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2648:HG3_PB_pbsv_4218:HG2_PB_HySA_8131:HG3_PB_HySA_6630:HG3_Ill_SVrefine2DISCOVARDovetail_3286:HG2_PB_PB10Xdip_22081:HG2_PB_PB10Xdip_22080:HG2_PB_SVrefine2Falcon1plusDovetail_8638:HG2_PB_SVrefine2PB10Xhap12_3179:HG4_PB_pbsv_4350:HG2_PB_SVrefine2Falcon2Bionano_2077:HG4_PB_SVrefine2PBcRDovetail_2211:HG2_PB_SVrefine2PBcRplusDovetail_8016:HG2_PB_pbsv_4325;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3179;NumExactMatchSVs=1;ClusterMaxShiftDist=0.29404;ClusterMaxSizeDiff=0.29404;ClusterMaxEditDist=0.32053;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=388;DistBack=14469;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=167;REFWIDENED=4:21347765-21347931;PctSeqSimilarity=0.9685;PctSizeSimilarity=0.9372;PctRecOverlap=0.7904;SizeDiff=-26;StartDistance=-74;EndDistance=-74;GTMatch=1;TruScore=89;MatchId=3966.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:83:1/1:0:21:3:36:./.:0:0:0:0:./.:1:15:1/1:2:49:.:.:.
chr4	23511008	HG2_PB_SVrefine2Falcon1plusDovetail_8642	T	TAGAAAAGCCTGAACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGCGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3421:HG4_PB_pbsv_4359:HG3_PB_assemblyticsfalcon_19098:HG2_PB_pbsv_4332:HG4_PB_SVrefine2Falcon1Dovetail_2657:HG3_PB_SVrefine2Falcon1Dovetail_2727:HG4_Ill_MetaSV_3670:HG4_Ill_GATKHCSBGrefine_3014:HG2_PB_SVrefine2Falcon1plusDovetail_8642:HG2_Ill_MetaSV_3507;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_MetaSV_3507:HG2_PB_SVrefine2Falcon1plusDovetail_8642:HG4_Ill_GATKHCSBGrefine_3014:HG4_Ill_MetaSV_3670;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0418535;ClusterMaxSizeDiff=0.038864;ClusterMaxEditDist=0.136095;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=330;DistBack=11731;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:23511009-23511024;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3967.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:46:43:0|1:42:1:0:30:./.:0:0:0:0:0/1:25:10:./.:5:37:.:.:.
chr4	24775162	HG3_PB_HySA_6655	T	TACAACATACATATATGTATACATGTATATATGTACATACACATACATATATGTATACATGTATATATGTACATACACATACATATATGTATACATGTATATATGTACACACACATACATATATGTATACATGTATATATGTACACACACATACATATATGTATACATGTATATATGTACAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2081:HG2_PB_pbsv_4336:HG3_PB_HySA_6655:HG2_PB_HySA_8165:HG3_PB_pbsv_4227;NumClusterSVs=5;ExactMatchIDs=HG3_PB_HySA_6655;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0491803;ClusterMaxSizeDiff=0.0437158;ClusterMaxEditDist=0.225201;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=181;DistBack=31;DistForward=22638;DistMin=31;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=257;REFWIDENED=4:24775035-24775291;PctSeqSimilarity=0.9972;PctSizeSimilarity=0.9945;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3968.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:35:0|1:32:1:4:30:./.:0:0:0:0:0/1:21:14:./.:.:.:.:.:.
chr4	25810458	HG4_Ill_GATKHC_7247	G	GAGGCGGGCAGATCACGAGGTCAGGAAATCGAGACCATCCTGGCTAACACGGTGAAACCCCCGTCTCTACTAAAAAATAGAAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTAATCCCAGCACTTTGGGAGGCCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3192:HG4_PB_assemblyticsfalcon_18787:HG4_PB_SVrefine2Falcon1Dovetail_2660:HG3_PB_SVrefine2PBcRDovetail_2005:HG3_PB_HySA_6665:HG3_PB_pbsv_4232:HG2_PB_pbsv_4340:HG4_PB_HySA_6470:HG2_PB_PB10Xdip_22098:HG2_PB_PB10Xdip_22097:HG4_Ill_MetaSV_3673:HG4_Ill_GATKHC_7247:HG4_Ill_GATKHCSBGrefine_3020:HG4_Ill_250bpfermikitraw_6041:HG3_Ill_manta_973:HG3_Ill_MetaSV_3672:HG3_Ill_GATKHC_7195:HG3_Ill_GATKHCSBGrefine_2884:HG2_Ill_manta_1200:HG2_Ill_MetaSV_3511:HG2_Ill_GATKHC_7147:HG2_Ill_GATKHCSBGrefine_2877:HG2_PB_HySA_8176:HG4_PB_SVrefine2PBcRDovetail_2217:HG4_Ill_SVrefine2DISCOVARDovetail_3290:HG3_Ill_SVrefine2DISCOVARDovetail_3310:HG2_PB_SVrefine2PBcRplusDovetail_8022:HG2_PB_SVrefine2PB10Xhap12_3188:HG2_PB_SVrefine2Falcon2Bionano_2083:HG2_PB_SVrefine2Falcon1plusDovetail_8646:HG2_Ill_SVrefine2DISCOVARplusDovetail_9314;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2877:HG2_Ill_GATKHC_7147:HG2_Ill_MetaSV_3511:HG2_Ill_manta_1200:HG3_Ill_GATKHCSBGrefine_2884:HG3_Ill_GATKHC_7195:HG3_Ill_MetaSV_3672:HG3_Ill_manta_973:HG4_Ill_250bpfermikitraw_6041:HG4_Ill_GATKHCSBGrefine_3020:HG4_Ill_GATKHC_7247:HG4_Ill_MetaSV_3673;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0501792;ClusterMaxEditDist=0.229391;PBcalls=15;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=136;DistBack=-128;DistForward=19020;DistMin=-128;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=173;REFWIDENED=4:25810421-25810593;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3969.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:71:1/1:0:31:0:35:./.:0:0:0:0:1/1:1:33:./.:.:.:.:.:.
chr4	27071285	HG2_Ill_SVrefine2DISCOVARplusDovetail_9325	C	TAAAGACTTTGCTTTGCTTACTGTGCAAATGAAAAGGTGAGGGATGCTCTTAATGGGTTAAACAGTAAAGAAGCCAGAGTGGTGGAGACTTGCTGGAAGAGGCTGAATGGGAACAGGGGTGCCTCCACATTCTAGTCTGTGCT	20	PASS	ClusterIDs=HG4_Ill_250bpfermikitraw_6052:HG2_PB_assemblyticsfalcon_19213:HG4_PB_SVrefine2PBcRDovetail_2222:HG2_PB_SVrefine2Falcon2Bionano_2088:HG2_Ill_SVrefine2DISCOVARplusDovetail_9325:HG2_PB_SVrefine2Falcon1plusDovetail_8651:HG2_PB_pbsv_4350:HG4_PB_HySA_6481:HG4_PB_pbsv_4379;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9325:HG2_PB_SVrefine2Falcon2Bionano_2088:HG4_PB_SVrefine2PBcRDovetail_2222;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0684932;ClusterMaxSizeDiff=0.0684932;ClusterMaxEditDist=0.22;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=142;DistBack=132;DistForward=106105;DistMin=132;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=131;REFWIDENED=4:27071154-27071284;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.993;PctRecOverlap=0.986;SizeDiff=1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3971.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:15:1|0:3:10:35:1:./.:0:0:0:0:0/1:23:11:./.:.:.:.:.:.
chr4	27208003	HG3_Ill_SVrefine2DISCOVARDovetail_3316	A	AATGTTTTTAAAATATTTCTGGAAAACTGAGGCTGATAGGAAAGTCTGCTCACATAAAGGTCCAGCTTTTAGTTATGCAGAAACTTTGTCTAACATAAGAATTCATTTGGGAGGATTCCGGGAAACTGAGGCTTTCCTGGAAGCCTGGTTACTATGGTTTCTTGGGCATCCTTAGATGTCCTCTGGTTACT	20	PASS	ClusterIDs=HG2_PB_HySA_8190:HG4_PB_assemblyticsfalcon_18800:HG3_PB_HySA_6681:HG3_PB_pbsv_4241:HG2_PB_pbsv_4351:HG4_PB_HySA_6483:HG2_PB_PB10Xdip_22111:HG2_PB_PB10Xdip_22110:HG4_PB_SVrefine2Falcon1Dovetail_2666:HG4_Ill_250bpfermikitraw_6055:HG2_10X_SVrefine210Xhap12_3197:HG4_PB_SVrefine2PBcRDovetail_2223:HG4_Ill_SVrefine2DISCOVARDovetail_3297:HG3_Ill_SVrefine2DISCOVARDovetail_3316:HG2_PB_SVrefine2PBcRplusDovetail_8027:HG2_PB_SVrefine2PB10Xhap12_3195:HG2_PB_SVrefine2Falcon2Bionano_2089:HG2_PB_SVrefine2Falcon1plusDovetail_8652:HG2_Ill_SVrefine2DISCOVARplusDovetail_9326:HG4_PB_pbsv_4380;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9326:HG2_PB_SVrefine2Falcon1plusDovetail_8652:HG2_PB_SVrefine2Falcon2Bionano_2089:HG2_PB_SVrefine2PB10Xhap12_3195:HG2_PB_SVrefine2PBcRplusDovetail_8027:HG3_Ill_SVrefine2DISCOVARDovetail_3316:HG4_Ill_SVrefine2DISCOVARDovetail_3297:HG4_PB_SVrefine2PBcRDovetail_2223;NumExactMatchSVs=8;ClusterMaxShiftDist=0.117048;ClusterMaxSizeDiff=0.117048;ClusterMaxEditDist=0.264059;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=190;DistBack=30583;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=184;REFWIDENED=4:27208004-27208187;PctSeqSimilarity=0.9979;PctSizeSimilarity=1;PctRecOverlap=0.7801;SizeDiff=0;StartDistance=-42;EndDistance=-42;GTMatch=0;TruScore=92;MatchId=3972.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:1/1:3:31:1:20:./.:0:0:0:0:1/1:1:27:./.:.:.:.:.:.
chr4	27949761	HG3_Ill_150bpfermikitraw_5626	A	AAAGAAAGTTAAGCCTATGTAATCTACATCATTTTTATGTAAGAAAATGTCCTAAGTCTATCTAGAAAATCTACATTGAATACAGAAGTCATGACAATCTCG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2667:HG4_PB_HySA_6487:HG2_PB_PB10Xdip_22113:HG2_PB_pbsv_4354:HG3_PB_HySA_6688:HG4_PB_pbsv_4382:HG2_PB_PB10Xdip_22112:HG2_PB_HySA_8196:HG3_Ill_GATKHC_7214:HG3_Ill_GATKHCSBGrefine_2894:HG3_Ill_250bpfermikitraw_5812:HG3_Ill_150bpfermikitraw_5626:HG2_Ill_GATKHCSBGrefine_2891:HG3_Ill_SVrefine2DISCOVARDovetail_3319:HG2_PB_SVrefine2Falcon2Bionano_2090:HG2_Ill_SVrefine2DISCOVARplusDovetail_9329:HG4_Ill_SVrefine2DISCOVARDovetail_3301:HG2_PB_SVrefine2PBcRplusDovetail_8028:HG2_PB_SVrefine2PB10Xhap12_3196:HG2_PB_SVrefine2Falcon1plusDovetail_8653;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2891:HG3_Ill_150bpfermikitraw_5626:HG3_Ill_250bpfermikitraw_5812:HG3_Ill_GATKHCSBGrefine_2894:HG3_Ill_GATKHC_7214;NumExactMatchSVs=5;ClusterMaxShiftDist=0.164948;ClusterMaxSizeDiff=0.164948;ClusterMaxEditDist=0.310881;PBcalls=12;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=101;DistBack=2;DistForward=16226;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=199;REFWIDENED=4:27949691-27949889;PctSeqSimilarity=0.9902;PctSizeSimilarity=0.9902;PctRecOverlap=0.9806;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3973.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:90:1/1:1:40:1:44:./.:0:0:0:0:0/1:13:35:./.:.:.:.:.:.
chr4	28107827	HG3_Ill_Krunchall_5992	A	AAGGGAGGAAGGGAAGGGAGGGAGGGAGGAAGGAAGGAAGGAAAGAAGGAAGGG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_5565:HG2_PB_HySA_8199:HG4_PB_pbsv_4383:HG4_PB_assemblyticsfalcon_18808:HG3_PB_assemblyticsfalcon_19137:HG2_PB_assemblyticsfalcon_19223:HG3_PB_pbsv_4245:HG2_PB_PB10Xdip_22115:HG2_PB_PB10Xdip_22114:HG3_PB_HySA_6691:HG4_Ill_Krunchall_6304:HG4_Ill_GATKHC_7271:HG4_Ill_GATKHCSBGrefine_3032:HG4_Ill_250bpfermikitraw_6061:HG3_Ill_Krunchall_5992:HG3_Ill_GATKHC_7218:HG3_Ill_250bpfermikitraw_5815:HG3_Ill_150bpfermikitraw_5630:HG2_Ill_Krunchall_6106:HG2_Ill_GATKHC_7181:HG2_Ill_GATKHCSBGrefine_2892:HG2_Ill_250bpfermikitraw_6005;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5565:HG4_Ill_Krunchall_6304:HG4_Ill_GATKHC_7271:HG4_Ill_GATKHCSBGrefine_3032:HG4_Ill_250bpfermikitraw_6061:HG3_Ill_Krunchall_5992:HG3_Ill_GATKHC_7218:HG3_Ill_250bpfermikitraw_5815:HG3_Ill_150bpfermikitraw_5630:HG2_Ill_Krunchall_6106:HG2_Ill_GATKHC_7181:HG2_Ill_GATKHCSBGrefine_2892:HG2_Ill_250bpfermikitraw_6005;NumExactMatchSVs=13;ClusterMaxShiftDist=0.126126;ClusterMaxSizeDiff=0.0900901;ClusterMaxEditDist=0.26087;PBcalls=9;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=-94;DistForward=48;DistMin=-94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=160;REFWIDENED=4:28107762-28107921;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3974.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:./.:0:1:0:2:./.:0:0:0:0:0/1:7:20:./.:.:.:.:.:.
chr4	28126252	HG2_Ill_GATKHCSBGrefine_2893	T	TATATATGAATATATATATATATGAATATATATATATGAATATATATATATATGAATATATATATATGAATATATATATATGAATATATATATATATATATATAA	20	PASS	ClusterIDs=HG3_PB_pbsv_4246:HG4_Ill_MetaSV_3676:HG2_PB_HySA_8201:HG2_PB_PB10Xdip_22117:HG2_PB_PB10Xdip_22116:HG3_PB_assemblyticsfalcon_19138:HG3_Ill_Spiral_4712:HG3_Ill_SVrefine2DISCOVARDovetail_3321:HG4_PB_SVrefine2Falcon1Dovetail_2668:HG4_PB_assemblyticsfalcon_18809:HG4_PB_SVrefine2PBcRDovetail_2224:HG2_PB_SVrefine2PBcRplusDovetail_8030:HG4_Ill_SVrefine2DISCOVARDovetail_3303:HG3_Ill_GATKHCSBGrefine_2895:HG2_Ill_manta_1203:HG2_10X_SVrefine210Xhap12_3199:HG4_Ill_manta_1060:HG4_Ill_GATKHCSBGrefine_3033:HG2_PB_SVrefine2PB10Xhap12_3198:HG2_PB_SVrefine2Falcon2Bionano_2092:HG2_Ill_SVrefine2DISCOVARplusDovetail_9331:HG2_Ill_GATKHCSBGrefine_2893:HG2_PB_SVrefine2Falcon1plusDovetail_8654:HG3_PB_HySA_6692:HG2_PB_HySA_8200:HG4_PB_HySA_6490:HG2_PB_assemblyticsPBcR_18580:HG2_PB_assemblyticsfalcon_19224:HG2_PB_pbsv_4356:HG4_PB_pbsv_4384;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2893:HG2_Ill_SVrefine2DISCOVARplusDovetail_9331:HG2_PB_SVrefine2Falcon2Bionano_2092:HG2_PB_SVrefine2PB10Xhap12_3198:HG4_Ill_GATKHCSBGrefine_3033:HG4_Ill_manta_1060;NumExactMatchSVs=6;ClusterMaxShiftDist=0.112676;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.301887;PBcalls=19;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=104;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:28126253-28126253;PctSeqSimilarity=0.9906;PctSizeSimilarity=0.9811;PctRecOverlap=0.9813;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3975.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:49:./.:0:1:0:0:./.:0:0:0:0:1/1:2:33:./.:.:.:.:.:.
chr4	29733154	HG2_10X_SVrefine210Xhap12_3207	C	CTTAGAAATGTTCAACTTGGCCAGGGAGGTGGCTTACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCCGTCTCTACTAAAAACACAAAAAATTAGCGGGGCGTGGTAGCGGGTGCCTGTAGTCCCAGCTACTCCGGAGGCTAAGGCAGGAAAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCCTGCCACTGCACTCCAGACTGGGCAACAGAGCAAGACTTCGTCTCAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAATGTTCAACTTGCTGAGCTATAGGCCATATCTTTGTAAAACGGGAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2229:HG3_PB_HySA_6713:HG2_PB_HySA_8225:HG4_PB_HySA_6513:HG2_PB_pbsv_4364:HG2_Ill_MetaSV_3520:HG3_Ill_MetaSV_3681:HG4_Ill_MetaSV_3681:HG4_PB_pbsv_4395:HG2_PB_PB10Xdip_22129:HG2_PB_PB10Xdip_22130:HG3_PB_pbsv_4256:HG2_10X_SVrefine210Xhap12_3207:HG4_PB_SVrefine2Falcon1Dovetail_2678:HG2_PB_SVrefine2PB10Xhap12_3205:HG2_PB_SVrefine2PBcRplusDovetail_8035:HG2_PB_SVrefine2Falcon2Bionano_2098:HG2_Ill_SVrefine2DISCOVARplusDovetail_9343:HG2_PB_SVrefine2Falcon1plusDovetail_8659:HG4_Ill_SVrefine2DISCOVARDovetail_3314;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3207;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0785805;ClusterMaxSizeDiff=0.0785805;ClusterMaxEditDist=0.253102;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=378;DistBack=17792;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=315;REFWIDENED=4:29733155-29733469;PctSeqSimilarity=0.9723;PctSizeSimilarity=0.957;PctRecOverlap=0.8177;SizeDiff=-17;StartDistance=-64;EndDistance=-64;GTMatch=0;TruScore=91;MatchId=3976.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:0:24:0:23:./.:0:0:0:0:1/1:0:30:1/1:2:58:.:.:.
chr4	30542414	HG2_10X_SVrefine210Xhap12_3211	T	TCTTTTGGAAATTAGTTGTGTTTGGTGTGAACTATGATTTGAAGTTAGTCTTATTTCATGTGTGTTTAGCCAATGTATCAAGCACCATTTGTTGAAAAGACTATTCTTTCATTCGTAACCTCAGTGACTTTGTAAAAAATCAACTGAATCGTATATATGCAGTTCTATTTCTGGAATTTCTACTCAGATGTCTATCTTTAATCAAATACCACTTTTTCTTGATAATGTAGCTTTATTACGAGCCTTAAAATAGGTAGTATAAGTCCTCAAAATACATTCTTTTAACATAAAGTGGCTAGGCTATTCTAGATCTTTGCATTTCCATATGTATTTTTAAATGAATTTGTTCATTTTTACAAAAAAAAGTTTCTGGTATTTTGATTGGACTTTTTAATCTATAGATCAACGTGAGGAAAATAGACATCTTGACAGTATTGGGCCATGCAATGTGTGTATCCACTTAGATAGGCTTGCTTTAATTTGGGCAATAGCTTGTATTTTTGTAGTGCGGAAGTTTTCGATGCTGTTGCAAATTGTACCGTTTGTTTAAATTTATTTTTCCAATTGTTTCTTACTATCATAAAAATAAAATAGAATTGCGTATATTGACTTTGCATCCTGCAGTCTTGCTAAATTCACTTATTAGATCTAGCAATTTAGTTCTAGTATTATAGGAGATTACTTACAATTTTCTATGGAGACACATATCAACTACAAATAAAAACAACTTTTTTTTTCTCTTTTCATATTGTACTGACCGTGTCATCCAATCTGATGTTAAACAAAAGTGTAAGAATTAATATGCTGCCTCTTTTTCTGATTTTAGGGAGAATACATTCAATACATCACCATTTAGTATATAAGGTTATCTGCAGACTTTCATTGATGTTATATTAGTCAGCTTGGGCTGCGTTAACAAAACACCACAGGCTGAGTGGCTAAAAAAACAGGCATTTGTTTTCTCATAGTTCTGGAGGTTTGAAGTGCCAAATCAAGGTGCCATCAGAATTGGTTTCTGGTAAAGTCTCTTCCTGGCTTGCAGATGGCCATCTTCTCTTTGTATCCTCACATGGCTTTTTCTCTGTGTGTATACAGAGAATGAGATAGAGTTTGCTGGTGTCTGTTCTTATTCTTATAAGGACACCAGTCCTATTAGATTAGGGTCCAATCCTTACAACATCATTTAACATTAATTATATCCTTAAAATTCCTGTTTCCAAAATATAACACATTGGGGGGTAGGGTTTCAACACATGAATTTGTGGGGGGTGGGAGGTTCACAGCTCAGTCCACAACAGATGCCCTTTAATAGATTCAGAAATTTCCCATCAATTTTTATTTAGCTGAGATATTTTATCATGAAAGGCTGTTGAATGCTGTCAAATAATTTGTCGGCCTCTACTGACATAAAATTATACTCAGGTGGTAAATCACATTATTTTACTTATAAATATTTAGTTAACTTCCTTTGTAGGATGAACCCCACTTGCTCATGATATATTTATTCTTTTATATTTGATTGAGCACTTTTGCATTTATGTTGCTGAAGAATAATTTCTTGTAATGTCATCGGGTTTTGGTATCATTATATAGGCTTTCTAAGATTAATTGGAAAAAGTTCCTTTCTCCTAAATTTTTTGAGAGGCTTTTTCAAAATTGGTATTACTTGTTCCTTAAACTTTTGATAGAGTTTATCTGTGAAACCATCATGGCCTAGAGTTTTCTTTGTAAGAAGGTTTTGTTTGCAATTTCAACTCTATATGTAGCTTTAGATATAGATATCAGATATATTCAGATTTCGTGTTTTTTCTTGAATAAGCTTTAATAAAGCTAGATACTACAAACAAAAAACTCAGAAAAAGTATACTCACAAGAATATTCAAATAGAATAGCTTAAAACAGTACTGCAGGCAAAAGACTATAAAGAAGCTGGTAAAACTATGTTAGTATCAGTAAGTTAGAATTAAAAAAGAAGCTATTACGGAAGATAAAAATGTTTAATTTATTAGGAAATGTAGTAATTTTAAAATTATATGAAGCTAATGATGAAACAGCAAAATGTATAAAACAAATATCAACAGAACTACAAGGAGAAATTGACACATTTATCACAGTAAATTTTTGGCACGTCTCTCTCAGAAGTTGATACATTAATTAAACGAACAAACAGGCAATAAACAAACTAGAAAGAATTTGAACAACTAAGTTAACAAGCTTAACTAATGCATACATACAGAATGCAATTCCAAAATACAATAATAGAAAATGAACTTTATCATGCTTTTATATATTCTTCAAAGCCTTGCTTCTATATTCAGATTCTAAAATAATAAAATATAGTTATATTGTACATTACCCATAATATGAAAGTTATCAACAGTCACTATTTTATGTTTCATAATTCTTAAGAAGCAATAAAAACACTACTATTAAGAACTGTATACAAGTTCAACAGCATATTTATAAGCATAAATTGAACATTAATAGAGTGAAAGAGTACGCAGACATTAAAATTTCATAGTTCATCTAGATTTTGATGACGTTGTTACCATTAAAATATATTTCTTTAAAAAGCAAATGAAATTCTAGTGTAGCTCTACAGCAGCATGTAAAAATAAGACAGGAGCAAAGTATATGCTGTGGCA	20	PASS	ClusterIDs=HG4_Ill_Spiral_350:HG3_PB_pbsv_4257:HG2_PB_SVrefine2PB10Xhap12_3206:HG4_PB_SVrefine2Falcon1Dovetail_2680:HG3_Ill_SVrefine2DISCOVARDovetail_3334:HG2_PB_SVrefine2PBcRplusDovetail_8036:HG2_10X_SVrefine210Xhap12_3211:HG4_PB_SVrefine2PBcRDovetail_2231:HG2_PB_HySA_8231:HG2_PB_PB10Xdip_22131:HG3_Ill_Spiral_4728;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3211:HG2_PB_SVrefine2PBcRplusDovetail_8036;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0300469;ClusterMaxSizeDiff=0.0296714;ClusterMaxEditDist=0.0938669;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=2644;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:30542415-30542416;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3977.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:46:0|1:32:2:0:26:./.:0:0:0:0:0/1:33:12:0/1:97:134:.:2622:.
chr4	32316862	HG3_Ill_Krunchall_6032	C	CAGCCTTGACTGGCTTTCTAGACTTTCTTGCTCTCAACACCACTCAAAATAATATTTCTTTCTTCATTATCATATGACA	20	PASS	ClusterIDs=HG3_PB_pbsv_4266:HG4_Ill_svaba_5690:HG4_Ill_manta_1068:HG4_Ill_Krunchall_6354:HG4_Ill_GATKHC_7338:HG4_Ill_GATKHCSBGrefine_3055:HG4_Ill_Cortex_2614:HG4_Ill_250bpfermikitraw_6109:HG4_Ill_150bpfermikitraw_5818:HG3_PB_assemblyticsfalcon_19185:HG3_Ill_svaba_5668:HG3_Ill_manta_984:HG3_Ill_Spiral_4746:HG3_Ill_Krunchall_6032:HG3_Ill_GATKHC_7263:HG3_Ill_GATKHCSBGrefine_2919:HG3_Ill_Cortex_2628:HG3_Ill_250bpfermikitraw_5855:HG3_Ill_150bpfermikitraw_5667:HG2_Ill_svaba_5572:HG2_Ill_manta_1214:HG2_Ill_SpiralSDKrefine_12121:HG2_Ill_Krunchall_6156:HG2_Ill_GATKHCSBGrefine_2916:HG2_Ill_Cortex_6168:HG2_Ill_250bpfermikitraw_6046:HG2_Ill_150bpfermikitraw_5603:HG2_PB_HySA_8257:HG2_Ill_breakscan11_3422:HG2_PB_pbsv_4380;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5603:HG2_Ill_250bpfermikitraw_6046:HG2_Ill_Cortex_6168:HG2_Ill_GATKHCSBGrefine_2916:HG2_Ill_Krunchall_6156:HG2_Ill_SpiralSDKrefine_12121:HG2_Ill_manta_1214:HG2_Ill_svaba_5572:HG3_Ill_150bpfermikitraw_5667:HG3_Ill_250bpfermikitraw_5855:HG3_Ill_Cortex_2628:HG3_Ill_GATKHCSBGrefine_2919:HG3_Ill_GATKHC_7263:HG3_Ill_Krunchall_6032:HG3_Ill_Spiral_4746:HG3_Ill_manta_984:HG3_Ill_svaba_5668:HG3_PB_assemblyticsfalcon_19185:HG4_Ill_150bpfermikitraw_5818:HG4_Ill_250bpfermikitraw_6109:HG4_Ill_Cortex_2614:HG4_Ill_GATKHCSBGrefine_3055:HG4_Ill_GATKHC_7338:HG4_Ill_Krunchall_6354:HG4_Ill_manta_1068:HG4_Ill_svaba_5690;NumExactMatchSVs=26;ClusterMaxShiftDist=0.111801;ClusterMaxSizeDiff=0.0621118;ClusterMaxEditDist=0.195122;PBcalls=4;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=78;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=4:32316861-32316864;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3979.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:40:0|1:35:1:1:36:./.:0:0:0:0:0/1:32:19:./.:.:.:.:.:.
chr4	32887937	HG2_Ill_SVrefine2DISCOVARplusDovetail_9359	C	TATATTTATATATAAATATGTATTTATATATAATTACATATTTATATATAATTATATATTTATATATAAATATGTATTTATATATAATTATATATTTATATATAAATATGTATTTATATATAATTACATATTTATATATAATTAT	20	PASS	ClusterIDs=HG2_PB_HySA_8263:HG4_PB_HySA_6553:HG2_PB_assemblyticsfalcon_19271:HG2_PB_SVrefine2Falcon1plusDovetail_8667:HG2_PB_SVrefine2Falcon2Bionano_2105:HG2_Ill_SVrefine2DISCOVARplusDovetail_9359:HG4_PB_pbsv_4418:HG2_PB_pbsv_4383;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9359:HG2_PB_SVrefine2Falcon2Bionano_2105;NumExactMatchSVs=2;ClusterMaxShiftDist=0.161074;ClusterMaxSizeDiff=0.0939597;ClusterMaxEditDist=0.33557;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=144;DistBack=-1;DistForward=12;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=144;REFWIDENED=4:32887862-32888005;PctSeqSimilarity=0.9969;PctSizeSimilarity=1;PctRecOverlap=0.8828;SizeDiff=0;StartDistance=17;EndDistance=17;GTMatch=0;TruScore=95;MatchId=3982.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:45:0|1:36:9:1:28:./.:0:0:0:0:0/1:22:19:./.:.:.:.:.:.
chr4	36045448	HG2_Ill_GATKHC_7282	A	AAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGCAAGGGAACGGAAGGGAAGGGGAGGGG	20	PASS	ClusterIDs=HG2_PB_HySA_8284:HG2_PB_PB10Xdip_22199:HG4_Ill_svaba_5714:HG4_Ill_GATKHC_7375:HG3_Ill_svaba_5687:HG2_Ill_svaba_5595:HG2_Ill_GATKHC_7282:HG2_Ill_GATKHCSBGrefine_2930;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2930:HG2_Ill_GATKHC_7282:HG2_Ill_svaba_5595:HG3_Ill_svaba_5687:HG4_Ill_GATKHC_7375:HG4_Ill_svaba_5714;NumExactMatchSVs=6;ClusterMaxShiftDist=0.030303;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.030303;PBcalls=2;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=2;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=93;REFWIDENED=4:36045407-36045499;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3983.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:1:9:0:12:./.:0:0:0:0:./.:1:4:./.:.:.:.:.:.
chr4	37510906	HG2_PB_PB10Xdip_22209	A	AGGCGGTGGTGGGGCGGAGGCACCCCCCACCTCCCAGACGGGGCAGCTGGCTGGGCGGGGGCTGCCCCCCACCTCCCTCCCGGACG	10	PASS	ClusterIDs=HG2_PB_HySA_8295:HG2_PB_pbsv_4405:HG2_PB_HySA_8296:HG3_PB_pbsv_4288:HG2_PB_PB10Xdip_22210:HG2_PB_PB10Xdip_22209;NumClusterSVs=6;ExactMatchIDs=HG2_PB_PB10Xdip_22209:HG2_PB_PB10Xdip_22210;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0578035;ClusterMaxSizeDiff=0.0578035;ClusterMaxEditDist=0.219653;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=85;DistBack=12;DistForward=42;DistMin=12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=4:37510896-37510950;PctSeqSimilarity=0.9744;PctSizeSimilarity=0.9884;PctRecOverlap=0.8621;SizeDiff=-1;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=94;MatchId=3985.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:78:1/1:3:16:1:33:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr4	37534567	HG3_Ill_GATKHCSBGrefine_2937	G	GACTTTGGGAACTTGGGGGGACTTTGGGAGGGGGGCGAGGGATAAAAGACTACAAATGTGGTGCAATGTATACTGCTTTGATGATGGGTGCACCAAAAATCTCACAAATCATC	20	PASS	ClusterIDs=HG3_Ill_GATKHCSBGrefine_2937:HG3_PB_HySA_6771:HG3_PB_assemblyticsfalcon_19228:HG2_PB_HySA_8297:HG3_PB_pbsv_4289:HG2_Ill_GATKHC_7297:HG2_PB_pbsv_4406:HG2_Ill_GATKHCSBGrefine_2939:HG3_Ill_SVrefine2DISCOVARDovetail_3363;NumClusterSVs=9;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_2937:HG3_Ill_SVrefine2DISCOVARDovetail_3363;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0683761;ClusterMaxSizeDiff=0.0611354;ClusterMaxEditDist=0.230769;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=112;DistBack=22978;DistForward=112;DistMin=112;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=113;REFWIDENED=4:37534568-37534680;PctSeqSimilarity=0.978;PctSizeSimilarity=0.9912;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3986.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:34:41:./.:12:8:7:27:./.:0:0:0:0:0/1:45:9:./.:.:.:.:.:.
chr4	37903308	HG2_PB_SVrefine2PB10Xhap12_3235	C	CTGATCTGGTTCAGTAGACTATAGTGATGGATAGCAGCTATTTCTTCCCATAAGAGTTATTTCTTGGGGGAGTCACTTACACTGAATTTGACTATCTTTTAAAAATTTATTGAAATATATGTTAAATAATACAA	20	PASS	ClusterIDs=HG4_PB_pbsv_4436:HG4_PB_HySA_6589:HG3_PB_pbsv_4294:HG2_PB_assemblyticsfalcon_19313:HG2_PB_PB10Xdip_22219:HG2_PB_PB10Xdip_22218:HG2_Ill_breakscan11_3424:HG4_Ill_svaba_5732:HG4_Ill_manta_1078:HG4_Ill_MetaSV_3696:HG4_Ill_GATKHCSBGrefine_3073:HG4_Ill_Cortex_2622:HG3_Ill_svaba_5711:HG3_Ill_manta_993:HG3_Ill_Spiral_4781:HG3_Ill_MetaSV_3696:HG3_Ill_GATKHCSBGrefine_2942:HG3_Ill_Cortex_2635:HG2_PB_SVrefine2PBcRplusDovetail_8059:HG2_PB_SVrefine2PB10Xhap12_3235:HG2_PB_SVrefine2Falcon2Bionano_2116:HG2_PB_SVrefine2Falcon1plusDovetail_8681:HG2_Ill_svaba_5615:HG2_Ill_manta_1226:HG2_Ill_SpiralSDKrefine_12155:HG2_Ill_SVrefine2DISCOVARplusDovetail_9377:HG2_Ill_MetaSV_3533:HG2_Ill_GATKHCSBGrefine_2941:HG2_Ill_Cortex_6192:HG2_10X_SVrefine210Xhap12_3242:HG4_PB_SVrefine2PBcRDovetail_2247;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3242:HG2_Ill_Cortex_6192:HG2_Ill_GATKHCSBGrefine_2941:HG2_Ill_MetaSV_3533:HG2_Ill_SVrefine2DISCOVARplusDovetail_9377:HG2_Ill_SpiralSDKrefine_12155:HG2_Ill_manta_1226:HG2_Ill_svaba_5615:HG2_PB_SVrefine2Falcon1plusDovetail_8681:HG2_PB_SVrefine2Falcon2Bionano_2116:HG2_PB_SVrefine2PB10Xhap12_3235:HG2_PB_SVrefine2PBcRplusDovetail_8059:HG3_Ill_Cortex_2635:HG3_Ill_GATKHCSBGrefine_2942:HG3_Ill_MetaSV_3696:HG3_Ill_Spiral_4781:HG3_Ill_manta_993:HG3_Ill_svaba_5711:HG4_Ill_Cortex_2622:HG4_Ill_GATKHCSBGrefine_3073:HG4_Ill_MetaSV_3696:HG4_Ill_manta_1078:HG4_Ill_svaba_5732;NumExactMatchSVs=23;ClusterMaxShiftDist=0.164794;ClusterMaxSizeDiff=0.142322;ClusterMaxEditDist=0.217228;PBcalls=11;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=133;DistBack=4;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=4:37903309-37903311;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3987.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:69:1/1:4:20:0:34:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr4	37952113	HG3_PB_assemblyticsfalcon_19234	T	TTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCTCCCCCCCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTACTGAGAATGATGGTTTCCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACAATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGGTCTTTATAGCAGCATGATTTTATACTCATTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTTTCCTATTTCTCTGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGTTGTTTGTTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTCATTAATCCCATTAATTAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGAGAGTTGTAGATATGCGGCATTATTTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAATCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGATGATTGAATCTGTAAATAACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTTCCATTTGTTTGTCTCCTCTTTTTTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTACTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATCTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTATTTTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTAGTTTATTTGCGTAGAGGTGTTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTTATGTGTCTATTTGATTCTTCTCTCTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAACCAGCTCCTGGATTCATTGATTTTTGAAGGTTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTGTTGCTCTTGCTTTTCTAGTTCTTTTAATTTGTGATTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCAGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGGTGTGGTGCTGAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2700:HG2_PB_assemblyticsfalcon_19314:HG3_PB_assemblyticsfalcon_19234:HG3_PB_pbsv_4295:HG2_PB_SVrefine2Falcon1plusDovetail_8682:HG4_PB_HySA_6590:HG4_PB_SVrefine2PBcRDovetail_2248:HG2_PB_SVrefine2PB10Xhap12_3236:HG2_PB_PB10Xdip_22220:HG2_PB_HySA_8303;NumClusterSVs=10;ExactMatchIDs=HG3_PB_assemblyticsfalcon_19234;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0995162;ClusterMaxSizeDiff=0.0995162;ClusterMaxEditDist=0.193658;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=4124;DistBack=0;DistForward=19281;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:37952114-37944155;PctSeqSimilarity=0.993;PctSizeSimilarity=0.9935;PctRecOverlap=0.9937;SizeDiff=-27;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3988.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:./.:10:6:15:14:./.:0:0:0:0:0/1:19:4:0/1:153:410:.:4132:.
chr4	38735796	HG2_PB_PB10Xdip_22221	C	TGGTGGTGGTGATTTTGGTGCTGGTGGTGGTGATGGTTGTGCTGGTGGTGGTGGTGCTGCTGGTGGTGGTGTTCATGGTGGTGGTGGTGGTGATCGTGGTTGTGGTGGTGGTAATGGTGGTGGAAGCAGTGGTGGTGGTGATAGTGATGGTGGTGGTGGTGATAGTGTTGGTGATGGTGGTGGTGGTGATGCTGGTGATGGTGACGGTGGTGGTCGTCATGGTGATGGTAGTGGTGATGGTGGTGGTGACGGTGGTGGTTGTGGTGGTTGTGGTGATGGTGGTGGTACTGGTGGTGGTGGTGATGGTGGTTGAGCTAGTGGTGATGGTGGTAGTGGCAGTGGTGGCAGTGATGGTAGAGGTAGCAGTGGTGGTGGTACTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGATGGTAGAGGTGGGGGTGGTGTTGGTGATGGTGATGATTGTGGTACTGG	10	PASS	ClusterIDs=HG3_PB_pbsv_4297:HG4_PB_pbsv_4438:HG2_PB_PB10Xdip_22222:HG2_PB_PB10Xdip_22221:HG4_PB_HySA_6592:HG3_PB_HySA_6779:HG2_PB_HySA_8306:HG2_PB_pbsv_4412;NumClusterSVs=8;ExactMatchIDs=HG2_PB_PB10Xdip_22221:HG2_PB_PB10Xdip_22222;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0382979;ClusterMaxSizeDiff=0.0340426;ClusterMaxEditDist=0.170526;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=461;DistBack=-203;DistForward=20191;DistMin=-203;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:38735797-38735795;PctSeqSimilarity=0.9989;PctSizeSimilarity=0.9978;PctRecOverlap=0.9957;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3989.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:3:12:0:12:./.:0:0:0:0:./.:1:4:1/1:0:127:.:.:.
chr4	38755998	HG2_PB_PB10Xdip_22223	T	ACACACACTCCACACACACACCCCATACACACATCCATACACATACACACACTCTACACGCACACACCCAAACATACACATACACACACTCCACACACACACCCCAAACATACACACACCCACACACATGCACACACACTCCACACACTATAAACACACGCTCCATGCACACACTACACACACACCCATACACACGCACACACACACCTAAATATACACATACACACACGCTCTACACACACACTGCACACACTATACACACACTACACACACCCAAACATACACACACCCAACATACACACATGCACACAGAAACTCCACACACACTTTACACACACACCCCAAACACACACATGCACACACACTCCACACACACTTCACACACACCCCAAACACACACATGCACACACACACTCCACACACACCCCAAACACACACATGCACATGCACACTCCACACACACACTTTACACACACACTCCACACACACATCCCAACATACACACACTCCACACACACACATATTCCACATACACACTCCATATACACATACACATAAATATACACACACACCAAATATATGCACACTCTCCATACACATACTCTAC	20	PASS	ClusterIDs=HG3_PB_pbsv_4298:HG3_Ill_SVrefine2DISCOVARDovetail_3368:HG4_PB_HySA_6593:HG2_PB_HySA_8307:HG3_Ill_GATKHCSBGrefine_2944:HG4_Ill_GATKHCSBGrefine_3074:HG2_Ill_GATKHCSBGrefine_2942:HG4_Ill_manta_1079:HG4_PB_pbsv_4439:HG2_PB_PB10Xdip_22224:HG3_Ill_manta_994:HG2_PB_PB10Xdip_22223:HG2_Ill_breakscan11_3425:HG4_PB_SVrefine2PBcRDovetail_2251:HG4_Ill_SVrefine2DISCOVARDovetail_3355:HG2_PB_SVrefine2PBcRplusDovetail_8061:HG2_PB_SVrefine2PB10Xhap12_3238:HG2_PB_SVrefine2Falcon1plusDovetail_8684:HG2_PB_SVrefine2Falcon2Bionano_2118:HG3_PB_assemblyticsfalcon_19238:HG2_PB_assemblyticsfalcon_19316:HG4_PB_SVrefine2Falcon1Dovetail_2703:HG2_Ill_SVrefine2DISCOVARplusDovetail_9379:HG3_PB_SVrefine2PBcRDovetail_2015:HG2_PB_pbsv_4413;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_breakscan11_3425:HG2_PB_PB10Xdip_22223:HG2_PB_PB10Xdip_22224;NumExactMatchSVs=3;ClusterMaxShiftDist=0.350877;ClusterMaxSizeDiff=0.350877;ClusterMaxEditDist=0.385965;PBcalls=16;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=606;DistBack=-50;DistForward=16309;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=60;REFWIDENED=4:38755989-38756048;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9984;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=3990.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:67:1/1:2:37:3:16:./.:0:0:0:0:0/1:2:13:1/1:4:135:.:1179:.
chr4	39410545	HG3_Ill_GATKHCSBGrefine_2949	C	CAAAAGCTAAATATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2706:HG2_PB_pbsv_4419:HG2_PB_assemblyticsfalcon_19323:HG3_PB_assemblyticsfalcon_19246:HG2_PB_SVrefine2Falcon1plusDovetail_8687:HG3_PB_HySA_6790:HG2_Ill_MetaSV_3535:HG3_Ill_MetaSV_3699:HG3_Ill_GATKHCSBGrefine_2949:HG2_PB_HySA_8318:HG3_PB_SVrefine2PBcRDovetail_2018:HG3_PB_pbsv_4304;NumClusterSVs=12;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_2949:HG3_Ill_MetaSV_3699;NumExactMatchSVs=2;ClusterMaxShiftDist=0.136858;ClusterMaxSizeDiff=0.136858;ClusterMaxEditDist=0.221875;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=-14;DistForward=7;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=4:39410546-39410559;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3991.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:42:0|1:31:2:1:30:./.:0:0:0:0:0/1:37:13:0/1:6:45:.:.:.
chr4	39564430	HG2_Ill_GATKHCSBGrefine_2946	A	ATTTTTGTATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2121:HG4_PB_pbsv_4447:HG4_PB_HySA_6599:HG2_Ill_MetaSV_3536:HG2_Ill_GATKHCSBGrefine_2946:HG2_PB_HySA_8319:HG2_PB_pbsv_4420;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2946:HG2_Ill_MetaSV_3536;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0758808;ClusterMaxSizeDiff=0.0704607;ClusterMaxEditDist=0.179894;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=178;DistBack=6;DistForward=4324;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=4:39564427-39564443;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3992.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:28:1:0:27:./.:0:0:0:0:0/1:26:6:./.:.:.:.:.:.
chr4	40754838	HG2_Ill_250bpfermikitraw_6118	A	ATAATGTAGCTTAACTCTGAAGCCAGCAATTTGTCATGGAGAAAAATTTGTATGATGTGAAATAAC	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_18696:HG4_Ill_manta_1082:HG4_Ill_Cortex_2626:HG3_Ill_manta_1000:HG3_Ill_Spiral_4797:HG3_Ill_Cortex_2640:HG2_PB_PB10Xdip_22252:HG2_PB_PB10Xdip_22251:HG2_Ill_manta_1229:HG2_Ill_Cortex_6207:HG3_PB_pbsv_4314:HG4_Ill_GATKHC_7424:HG4_Ill_GATKHCSBGrefine_3090:HG3_Ill_GATKHC_7340:HG3_Ill_GATKHCSBGrefine_2958:HG2_Ill_GATKHC_7330:HG2_Ill_GATKHCSBGrefine_2953:HG4_PB_pbsv_4455:HG2_PB_HySA_8343:HG4_PB_HySA_6633:HG2_PB_pbsv_4427:HG2_Ill_breakscan11_3427:HG4_Ill_svaba_5751:HG4_Ill_Krunchall_6429:HG4_Ill_250bpfermikitraw_6175:HG4_Ill_150bpfermikitraw_5890:HG3_Ill_svaba_5730:HG3_Ill_Krunchall_6104:HG3_Ill_250bpfermikitraw_5920:HG3_Ill_150bpfermikitraw_5737:HG2_Ill_svaba_5633:HG2_Ill_Krunchall_6231:HG2_Ill_250bpfermikitraw_6118:HG2_Ill_150bpfermikitraw_5676:HG3_PB_assemblyticsfalcon_19259:HG2_PB_assemblyticsfalcon_19337;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5676:HG2_Ill_250bpfermikitraw_6118:HG2_Ill_Krunchall_6231:HG2_Ill_svaba_5633:HG3_Ill_150bpfermikitraw_5737:HG3_Ill_250bpfermikitraw_5920:HG3_Ill_Krunchall_6104:HG3_Ill_svaba_5730:HG4_Ill_150bpfermikitraw_5890:HG4_Ill_250bpfermikitraw_6175:HG4_Ill_Krunchall_6429:HG4_Ill_svaba_5751;NumExactMatchSVs=12;ClusterMaxShiftDist=0.1875;ClusterMaxSizeDiff=0.1875;ClusterMaxEditDist=0.206349;PBcalls=10;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=0;DistForward=106793;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:40754837-40754839;PctSeqSimilarity=0.9851;PctSizeSimilarity=1;PctRecOverlap=0.9846;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=3993.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:1/1:0:33:2:13:./.:0:0:0:0:1/1:0:58:./.:.:.:.:.:.
chr4	41051380	HG2_Ill_GATKHCSBGrefine_2955	C	CGTCTCCGCCCGGCAGCCGCCCCGTCCGGGAGGTGGGGGGGCAGCCCCCTCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCTGCCCAGCCAGCCCCCGCGTCCGGGA	20	PASS	ClusterIDs=HG4_PB_pbsv_4457:HG2_Ill_SVrefine2DISCOVARplusDovetail_9391:HG4_PB_SVrefine2PBcRDovetail_2260:HG2_PB_PB10Xdip_22253:HG2_PB_PB10Xdip_22254:HG4_Ill_GATKHCSBGrefine_3092:HG2_Ill_GATKHCSBGrefine_2955:HG4_Ill_MetaSV_3701:HG2_Ill_MetaSV_3538:HG4_PB_HySA_6635:HG2_PB_SVrefine2PB10Xhap12_3250:HG2_PB_pbsv_4429:HG2_PB_SVrefine2PBcRplusDovetail_8069;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2955:HG4_Ill_GATKHCSBGrefine_3092;NumExactMatchSVs=2;ClusterMaxShiftDist=0.213439;ClusterMaxSizeDiff=0.213439;ClusterMaxEditDist=0.32;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=120;DistBack=-191;DistForward=14623;DistMin=-191;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:41051381-41051381;PctSeqSimilarity=0.9416;PctSizeSimilarity=0.8889;PctRecOverlap=0.8963;SizeDiff=-15;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=3994.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:./.:17:10:9:11:./.:0:0:0:0:0/1:22:6:./.:.:.:.:.:.
chr4	42088040	HG4_Ill_GATKHCSBGrefine_3097	T	TAAAAAGAAACAAGATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_8348:HG4_Ill_MetaSV_3704:HG2_PB_pbsv_4432:HG4_PB_HySA_6641:HG3_PB_assemblyticsfalcon_19266:HG2_PB_assemblyticsfalcon_19343:HG2_Ill_breakscan11_3428:HG4_PB_SVrefine2Falcon1Dovetail_2716:HG4_PB_SVrefine2PBcRDovetail_2264:HG4_Ill_GATKHCSBGrefine_3097:HG2_PB_SVrefine2Falcon2Bionano_2130:HG2_PB_SVrefine2Falcon1plusDovetail_8695;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2130:HG4_Ill_GATKHCSBGrefine_3097:HG4_PB_SVrefine2PBcRDovetail_2264;NumExactMatchSVs=3;ClusterMaxShiftDist=0.19281;ClusterMaxSizeDiff=0.189542;ClusterMaxEditDist=0.22549;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=10953;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:42088041-42088056;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3995.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:29:0|1:23:0:0:24:./.:0:0:0:0:0/1:40:10:0/1:8:25:.:.:.
chr4	42302196	HG2_Ill_250bpfermikitraw_6124	T	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCC	20	PASS	ClusterIDs=HG3_PB_pbsv_4318:HG2_PB_HySA_8351:HG2_PB_assemblyticsfalcon_19345:HG3_PB_assemblyticsfalcon_19269:HG2_PB_assemblyticsPBcR_18703:HG3_Ill_GATKHC_7350:HG2_Ill_GATKHC_7338:HG3_Ill_Spiral_4804:HG3_Ill_Krunchall_6115:HG3_Ill_250bpfermikitraw_5931:HG2_Ill_manta_1230:HG2_Ill_SpiralSDKrefine_12177:HG2_Ill_250bpfermikitraw_6124:HG2_PB_pbsv_4433:HG3_Ill_svaba_5742;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6124:HG2_Ill_SpiralSDKrefine_12177:HG2_Ill_manta_1230:HG3_Ill_250bpfermikitraw_5931:HG3_Ill_Krunchall_6115:HG3_Ill_Spiral_4804;NumExactMatchSVs=6;ClusterMaxShiftDist=0.300885;ClusterMaxSizeDiff=0.300885;ClusterMaxEditDist=0.355932;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=28222;DistForward=11896;DistMin=11896;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:42302195-42302197;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3996.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:34:0|1:21:1:3:31:./.:0:0:0:0:0/1:15:4:./.:.:.:.:.:.
chr4	43345693	HG2_Ill_GATKHCSBGrefine_2960	T	TCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCC	20	PASS	ClusterIDs=HG2_PB_HySA_8356:HG2_PB_assemblyticsfalcon_19352:HG3_Ill_GATKHC_7362:HG2_PB_pbsv_4435:HG2_Ill_GATKHC_7349:HG2_Ill_GATKHCSBGrefine_2960:HG2_PB_assemblyticsPBcR_18710:HG2_PB_PB10Xdip_22266:HG2_PB_PB10Xdip_22265;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2960:HG2_Ill_GATKHC_7349:HG3_Ill_GATKHC_7362;NumExactMatchSVs=3;ClusterMaxShiftDist=0.231884;ClusterMaxSizeDiff=0.231884;ClusterMaxEditDist=0.289855;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=75;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:43345692-43345694;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3997.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:1/1:1:28:0:18:./.:0:0:0:0:0/1:3:17:./.:.:.:.:.:.
chr4	43399973	HG2_PB_SVrefine2Falcon2Bionano_2132	T	TGAAATTTAAGCTACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_6806:HG4_PB_SVrefine2Falcon1Dovetail_2718:HG2_PB_PB10Xdip_22270:HG2_PB_PB10Xdip_22269:HG3_PB_pbsv_4323:HG4_PB_pbsv_4465:HG2_PB_assemblyticsPBcR_18712:HG2_PB_pbsv_4437:HG2_PB_assemblyticsfalcon_19354:HG4_PB_HySA_6648:HG2_10X_SVrefine210Xhap12_3265:HG3_PB_SVrefine2PBcRDovetail_2024:HG2_PB_SVrefine2PBcRplusDovetail_8071:HG2_PB_SVrefine2PB10Xhap12_3256:HG2_PB_SVrefine2Falcon2Bionano_2132:HG2_PB_SVrefine2Falcon1plusDovetail_8697:HG2_PB_HySA_8359;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2132:HG2_PB_SVrefine2PB10Xhap12_3256:HG2_PB_SVrefine2PBcRplusDovetail_8071:HG3_PB_SVrefine2PBcRDovetail_2024;NumExactMatchSVs=4;ClusterMaxShiftDist=0.141044;ClusterMaxSizeDiff=0.141044;ClusterMaxEditDist=0.208505;PBcalls=16;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=348;DistBack=13030;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=4:43399974-43399986;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9971;PctRecOverlap=0.9599;SizeDiff=1;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=98;MatchId=3998.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:./.:1:2:1:11:./.:0:0:0:0:1/1:0:17:1/1:2:51:.:.:.
chr4	43527670	HG2_Ill_FB_4019	A	AAAAATAAAATCATAATCTATAAATGCCGTTGGCAAAAAGGAATATAAAACTTTT	20	PASS	ClusterIDs=HG2_PB_pbsv_4439:HG4_Ill_Cortex_2630:HG3_Ill_Cortex_2644:HG2_Ill_Cortex_6216:HG3_PB_HySA_6808:HG2_PB_PB10Xdip_22272:HG2_PB_PB10Xdip_22271:HG4_Ill_svaba_5770:HG4_Ill_manta_1086:HG4_Ill_Krunchall_6452:HG4_Ill_GATKHC_7450:HG4_Ill_GATKHCSBGrefine_3102:HG4_Ill_FB_4108:HG4_Ill_250bpfermikitraw_6197:HG4_Ill_150bpfermikitraw_5915:HG3_Ill_svaba_5754:HG3_Ill_manta_1004:HG3_Ill_Spiral_4811:HG3_Ill_Krunchall_6128:HG3_Ill_GATKHC_7366:HG3_Ill_GATKHCSBGrefine_2966:HG3_Ill_FB_4008:HG3_Ill_250bpfermikitraw_5944:HG3_Ill_150bpfermikitraw_5761:HG2_Ill_svaba_5648:HG2_Ill_manta_1235:HG2_Ill_SpiralSDKrefine_12185:HG2_Ill_Krunchall_6250:HG2_Ill_GATKHC_7353:HG2_Ill_GATKHCSBGrefine_2963:HG2_Ill_FB_4019:HG2_Ill_250bpfermikitraw_6136:HG2_Ill_150bpfermikitraw_5693:HG2_PB_HySA_8362:HG3_PB_pbsv_4325:HG4_PB_pbsv_4467;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5693:HG2_Ill_250bpfermikitraw_6136:HG2_Ill_FB_4019:HG2_Ill_GATKHCSBGrefine_2963:HG2_Ill_GATKHC_7353:HG2_Ill_Krunchall_6250:HG2_Ill_SpiralSDKrefine_12185:HG2_Ill_manta_1235:HG2_Ill_svaba_5648:HG3_Ill_150bpfermikitraw_5761:HG3_Ill_250bpfermikitraw_5944:HG3_Ill_FB_4008:HG3_Ill_GATKHCSBGrefine_2966:HG3_Ill_GATKHC_7366:HG3_Ill_Krunchall_6128:HG3_Ill_Spiral_4811:HG3_Ill_manta_1004:HG3_Ill_svaba_5754:HG4_Ill_150bpfermikitraw_5915:HG4_Ill_250bpfermikitraw_6197:HG4_Ill_FB_4108:HG4_Ill_GATKHCSBGrefine_3102:HG4_Ill_GATKHC_7450:HG4_Ill_Krunchall_6452:HG4_Ill_manta_1086:HG4_Ill_svaba_5770;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.216216;PBcalls=7;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=73194;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=4:43527669-43527672;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3999.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:71:1/1:1:35:2:22:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr4	43947484	HG2_Ill_scalpel_4343	A	ATTCAGTGTATATTCATGGAAACAGAATGCTTTCACTAGTCCGAAATTCTCCC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_5698:HG2_PB_pbsv_4444:HG2_PB_HySA_8372:HG4_PB_pbsv_4471:HG2_PB_PB10Xdip_22276:HG2_PB_PB10Xdip_22275:HG3_PB_HySA_6814:HG4_PB_assemblyticsfalcon_18948:HG3_PB_pbsv_4329:HG4_Ill_svaba_5777:HG4_Ill_Krunchall_6459:HG4_Ill_GATKHC_7457:HG4_Ill_GATKHCSBGrefine_3110:HG4_Ill_250bpfermikitraw_6203:HG4_Ill_150bpfermikitraw_5921:HG3_Ill_svaba_5760:HG3_Ill_Krunchall_6133:HG3_Ill_GATKHC_7371:HG3_Ill_GATKHCSBGrefine_2969:HG3_Ill_250bpfermikitraw_5949:HG3_Ill_150bpfermikitraw_5767:HG2_PB_assemblyticsfalcon_19362:HG2_PB_assemblyticsPBcR_18722:HG2_Ill_svaba_5655:HG2_Ill_scalpel_4343:HG2_Ill_manta_1239:HG2_Ill_Krunchall_6257:HG2_Ill_GATKHC_7358:HG2_Ill_GATKHCSBGrefine_2971:HG2_Ill_250bpfermikitraw_6142;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5698:HG4_PB_assemblyticsfalcon_18948:HG4_Ill_svaba_5777:HG4_Ill_Krunchall_6459:HG4_Ill_GATKHC_7457:HG4_Ill_GATKHCSBGrefine_3110:HG4_Ill_250bpfermikitraw_6203:HG4_Ill_150bpfermikitraw_5921:HG3_Ill_svaba_5760:HG3_Ill_Krunchall_6133:HG3_Ill_GATKHC_7371:HG3_Ill_GATKHCSBGrefine_2969:HG3_Ill_250bpfermikitraw_5949:HG3_Ill_150bpfermikitraw_5767:HG2_PB_assemblyticsfalcon_19362:HG2_PB_assemblyticsPBcR_18722:HG2_Ill_svaba_5655:HG2_Ill_scalpel_4343:HG2_Ill_manta_1239:HG2_Ill_Krunchall_6257:HG2_Ill_GATKHC_7358:HG2_Ill_GATKHCSBGrefine_2971:HG2_Ill_250bpfermikitraw_6142;NumExactMatchSVs=23;ClusterMaxShiftDist=0.176991;ClusterMaxSizeDiff=0.159292;ClusterMaxEditDist=0.338983;PBcalls=10;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=15987;DistForward=52;DistMin=52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=54;REFWIDENED=4:43947485-43947538;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4000.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:1:11:0:6:./.:0:0:0:0:1/1:1:55:./.:.:.:.:.:.
chr4	43950001	HG2_Ill_GATKHC_7359	C	CATATATATATACATATATATATATATATATATATATATATGTATATATATATATATGTATAT	20	PASS	ClusterIDs=HG4_PB_pbsv_4472:HG2_PB_PB10Xdip_22277:HG2_PB_pbsv_4445:HG2_PB_HySA_8373:HG4_PB_SVrefine2Falcon1Dovetail_2721:HG4_Ill_svaba_5778:HG3_PB_pbsv_4330:HG4_Ill_scalpel_4249:HG4_Ill_GATKHC_7458:HG4_Ill_GATKHCSBGrefine_3111:HG4_Ill_FB_4112:HG4_Ill_150bpfermikitraw_5922:HG4_PB_SVrefine2PBcRDovetail_2269:HG4_Ill_SVrefine2DISCOVARDovetail_3384:HG3_Ill_manta_1007:HG3_Ill_Spiral_4814:HG3_Ill_GATKHC_7372:HG3_Ill_GATKHCSBGrefine_2970:HG3_Ill_250bpfermikitraw_5950:HG3_Ill_150bpfermikitraw_5768:HG2_PB_SVrefine2PBcRplusDovetail_8075:HG2_PB_SVrefine2PB10Xhap12_3260:HG2_PB_SVrefine2Falcon2Bionano_2136:HG2_PB_SVrefine2Falcon1plusDovetail_8700:HG2_Ill_scalpel_4344:HG2_Ill_manta_1240:HG2_Ill_SpiralSDKrefine_12189:HG2_Ill_SVrefine2DISCOVARplusDovetail_9403:HG2_Ill_GATKHC_7359:HG2_Ill_GATKHCSBGrefine_2972:HG2_Ill_FB_4023:HG2_Ill_250bpfermikitraw_6143:HG2_Ill_150bpfermikitraw_5699:HG2_10X_SVrefine210Xhap12_3270:HG4_PB_HySA_6662:HG2_Ill_breakscan11_3429;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3270:HG2_Ill_150bpfermikitraw_5699:HG2_Ill_250bpfermikitraw_6143:HG2_Ill_FB_4023:HG2_Ill_GATKHCSBGrefine_2972:HG2_Ill_GATKHC_7359:HG2_Ill_SVrefine2DISCOVARplusDovetail_9403:HG2_Ill_SpiralSDKrefine_12189:HG2_Ill_manta_1240:HG2_Ill_scalpel_4344:HG2_PB_SVrefine2Falcon1plusDovetail_8700:HG2_PB_SVrefine2Falcon2Bionano_2136:HG2_PB_SVrefine2PB10Xhap12_3260:HG2_PB_SVrefine2PBcRplusDovetail_8075:HG3_Ill_150bpfermikitraw_5768:HG3_Ill_250bpfermikitraw_5950:HG3_Ill_GATKHCSBGrefine_2970:HG3_Ill_GATKHC_7372:HG3_Ill_Spiral_4814:HG3_Ill_manta_1007:HG4_Ill_SVrefine2DISCOVARDovetail_3384:HG4_PB_SVrefine2PBcRDovetail_2269;NumExactMatchSVs=22;ClusterMaxShiftDist=0.176;ClusterMaxSizeDiff=0.176;ClusterMaxEditDist=0.296875;PBcalls=12;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=62;DistBack=2463;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=4:43950002-43950012;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4001.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:0:19:0:11:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr4	44419631	HG2_Ill_GATKHCSBGrefine_2973	A	AAAATAAACCAGAAACAAGCCTCCTTGCTTGCAAGAATCTGGTGGCATTAGCCGACTATATCTACTGGACCTATTATCCTGAACAAGCTGCCCTAACACCTGTATGTCATTTTCCAATATAAGAGACTACACATTGGAATAAGGAGGAACACCATAAAATATATTTAAGTTTCCTGGGAAAAGTCTTTTTTTAACAAAATGTTTTTATTTGTGCATCTATTTCTATTTTAAAGCAGAGATAAATTTGTTCTGCAGTATCTCAAATGAGGAAAAACAAATTATGTTTGGATTGTCCAAAGGCCCATAACTTCTGCCCTGAAAGGACCAAAGATCTCTCTCCTTAAAACAGGAGCCCCTCTTCAATACTTGTCTGTATGGTAAGACACCCTCATTTGTCAATGCCAGTAATTAAGACCATAATGCTAATTTGGGGTCCAAACTCACTGAGACAACTAAAATATATGACCTTTAGGCAGAGGACCAGAAAGAGTTCGGTTAACTTCCAAATATTGTTTAGCATTGTATTTGATCTGAAAATAAATGAATAGCAAAACAATTTGTCTAATCTATGTCTCTTGATGTCCTAAAATTTCTGTCTCATTGCGGTTTCAAAAATCAAAGTAGAGTCTTATCCAAAAAGGTCCATTACCACCAATTTGGACAAATTTTAGACCCATCTAGAGATGACATTCACTAGCTTTCACTACATATTTGATTTGTTAAATTGGTGCATGAATAAATAACTTATGGGAATATAAGTTGCTGTCATTAATGAAGCATGTGAGGTTGGAGAAAAAAGAAAAAAATCTATCTAAATTTGGCTTTATAAATGTGATGTTTAATTTCTCTTTAAAATTCAATTTGTTTAAATGAATATAAACCATTAGACCCAAGAATAGGAAAAGCTGATTACAAATGTTAATTTAAAATATTTAATTTTGTTGGGCAAGAGGAGCTACATGGAAAGAATATTATTCACACTCAGGTAATTCTCAGAGAACTGCCATATAAAATAAAAGGTTAATTTTGTG	20	PASS	ClusterIDs=HG4_PB_HySA_6663:HG4_PB_pbsv_4473:HG3_PB_pbsv_4332:HG2_PB_SVrefine2PB10Xhap12_3261:HG2_PB_PB10Xdip_22279:HG2_PB_pbsv_4446:HG2_PB_assemblyticsfalcon_19365:HG4_PB_assemblyticsfalcon_18951:HG2_Ill_breakscan11_3430:HG4_Ill_Spiral_355:HG3_Ill_Spiral_4816:HG2_PB_SVrefine2Falcon1plusDovetail_8701:HG4_PB_SVrefine2PBcRDovetail_2270:HG4_PB_SVrefine2Falcon1Dovetail_2722:HG4_Ill_SVrefine2DISCOVARDovetail_3387:HG4_Ill_MetaSV_3707:HG4_Ill_GATKHCSBGrefine_3112:HG4_Ill_Cortex_2631:HG3_PB_SVrefine2PBcRDovetail_2030:HG3_Ill_MetaSV_3706:HG3_Ill_GATKHCSBGrefine_2973:HG3_Ill_Cortex_2645:HG2_Ill_MetaSV_3540:HG2_Ill_GATKHCSBGrefine_2973:HG2_Ill_Cortex_6217:HG2_10X_SVrefine210Xhap12_3271;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3271:HG2_Ill_Cortex_6217:HG2_Ill_GATKHCSBGrefine_2973:HG2_Ill_MetaSV_3540:HG3_Ill_Cortex_2645:HG3_Ill_GATKHCSBGrefine_2973:HG3_Ill_MetaSV_3706:HG3_PB_SVrefine2PBcRDovetail_2030:HG4_Ill_Cortex_2631:HG4_Ill_GATKHCSBGrefine_3112:HG4_Ill_MetaSV_3707:HG4_Ill_SVrefine2DISCOVARDovetail_3387:HG4_PB_SVrefine2Falcon1Dovetail_2722:HG4_PB_SVrefine2PBcRDovetail_2270;NumExactMatchSVs=14;ClusterMaxShiftDist=0.137864;ClusterMaxSizeDiff=0.137864;ClusterMaxEditDist=0.17767;PBcalls=12;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=1030;DistBack=10200;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:44419632-44419632;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4002.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:53:0|1:17:0:0:35:./.:0:0:0:0:0/1:25:19:0/1:43:68:.:1193:.
chr4	45123431	HG4_Ill_GATKHCSBGrefine_3117	A	AAATTTAATTAAATGGATGTTACATAAATTTAATTAAATTTAATTAAATGGATGTTACATAAATTTAATTAAATTTAATTAAATGGATGTTACATAAATTTAATTT	20	PASS	ClusterIDs=HG2_PB_pbsv_4453:HG4_PB_assemblyticsfalcon_18965:HG3_PB_assemblyticsfalcon_19305:HG4_PB_pbsv_4479:HG2_PB_HySA_8383:HG4_PB_SVrefine2PBcRDovetail_2274:HG4_PB_SVrefine2Falcon1Dovetail_2728:HG4_Ill_SVrefine2DISCOVARDovetail_3393:HG4_Ill_GATKHCSBGrefine_3117:HG4_Ill_250bpfermikitraw_6216:HG4_Ill_150bpfermikitraw_5932:HG3_PB_SVrefine2Falcon1Dovetail_2748:HG2_PB_SVrefine2Falcon2Bionano_2140:HG2_Ill_SVrefine2DISCOVARplusDovetail_9409:HG2_Ill_GATKHCSBGrefine_2979:HG2_PB_SVrefine2PBcRplusDovetail_8081;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2979:HG2_Ill_SVrefine2DISCOVARplusDovetail_9409:HG2_PB_SVrefine2Falcon2Bionano_2140:HG3_PB_SVrefine2Falcon1Dovetail_2748:HG4_Ill_150bpfermikitraw_5932:HG4_Ill_250bpfermikitraw_6216:HG4_Ill_GATKHCSBGrefine_3117:HG4_Ill_SVrefine2DISCOVARDovetail_3393:HG4_PB_SVrefine2Falcon1Dovetail_2728:HG4_PB_SVrefine2PBcRDovetail_2274;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0657277;ClusterMaxSizeDiff=0.0469484;ClusterMaxEditDist=0.184332;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=105;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=31;REFWIDENED=4:45123407-45123437;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4003.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:56:0|1:32:7:10:41:./.:0:0:0:0:0/1:24:22:./.:.:.:.:.:.
chr4	45600736	HG4_PB_SVrefine2Falcon1Dovetail_2731	A	AACATATTCTATATGTATGTATAGAATACATATTCTATATGTATGTATAGAAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_5714:HG4_PB_pbsv_4482:HG2_PB_PB10Xdip_22291:HG2_PB_pbsv_4457:HG2_PB_PB10Xdip_22290:HG2_Ill_breakscan11_3431:HG2_PB_HySA_8386:HG4_PB_SVrefine2PBcRDovetail_2276:HG4_PB_SVrefine2Falcon1Dovetail_2731:HG4_Ill_svaba_5790:HG4_Ill_manta_1093:HG4_Ill_SVrefine2DISCOVARDovetail_3395:HG4_Ill_Krunchall_6471:HG4_Ill_GATKHC_7475:HG4_Ill_GATKHCSBGrefine_3119:HG4_Ill_FB_4119:HG4_Ill_250bpfermikitraw_6219:HG4_Ill_150bpfermikitraw_5935:HG3_PB_SVrefine2PBcRDovetail_2036:HG3_PB_SVrefine2Falcon1Dovetail_2749:HG3_Ill_svaba_5780:HG3_Ill_manta_1014:HG3_Ill_SVrefine2DISCOVARDovetail_3405:HG3_Ill_Krunchall_6157:HG3_Ill_GATKHC_7386:HG3_Ill_GATKHCSBGrefine_2981:HG3_Ill_250bpfermikitraw_5969:HG2_PB_SVrefine2PBcRplusDovetail_8083:HG2_PB_SVrefine2PB10Xhap12_3269:HG2_PB_SVrefine2Falcon2Bionano_2141:HG2_PB_SVrefine2Falcon1plusDovetail_8708:HG2_Ill_svaba_5673:HG2_Ill_manta_1244:HG2_Ill_SVrefine2DISCOVARplusDovetail_9411:HG2_Ill_Krunchall_6277:HG2_Ill_GATKHC_7378:HG2_Ill_GATKHCSBGrefine_2981:HG2_Ill_FB_4029:HG2_Ill_250bpfermikitraw_6159;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5714:HG4_PB_SVrefine2PBcRDovetail_2276:HG4_PB_SVrefine2Falcon1Dovetail_2731:HG4_Ill_svaba_5790:HG4_Ill_manta_1093:HG4_Ill_SVrefine2DISCOVARDovetail_3395:HG4_Ill_Krunchall_6471:HG4_Ill_GATKHC_7475:HG4_Ill_GATKHCSBGrefine_3119:HG4_Ill_FB_4119:HG4_Ill_250bpfermikitraw_6219:HG4_Ill_150bpfermikitraw_5935:HG3_PB_SVrefine2PBcRDovetail_2036:HG3_PB_SVrefine2Falcon1Dovetail_2749:HG3_Ill_svaba_5780:HG3_Ill_manta_1014:HG3_Ill_SVrefine2DISCOVARDovetail_3405:HG3_Ill_Krunchall_6157:HG3_Ill_GATKHC_7386:HG3_Ill_GATKHCSBGrefine_2981:HG3_Ill_250bpfermikitraw_5969:HG2_PB_SVrefine2PBcRplusDovetail_8083:HG2_PB_SVrefine2PB10Xhap12_3269:HG2_PB_SVrefine2Falcon2Bionano_2141:HG2_PB_SVrefine2Falcon1plusDovetail_8708:HG2_Ill_svaba_5673:HG2_Ill_manta_1244:HG2_Ill_SVrefine2DISCOVARplusDovetail_9411:HG2_Ill_Krunchall_6277:HG2_Ill_GATKHC_7378:HG2_Ill_GATKHCSBGrefine_2981:HG2_Ill_FB_4029:HG2_Ill_250bpfermikitraw_6159;NumExactMatchSVs=33;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.25;PBcalls=13;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=13904;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=47;REFWIDENED=4:45600735-45600784;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4004.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:76:./.:0:7:4:7:./.:0:0:0:0:1/1:0:67:./.:.:.:.:.:.
chr4	46233052	HG3_Ill_manta_1015	G	GTATGAAATTGATATGCAAAAATCCAGAATACCATAACACTAATCTATAGTAATCAAAA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9416:HG2_PB_pbsv_4459:HG3_PB_HySA_6827:HG3_PB_pbsv_4348:HG2_PB_HySA_8388:HG4_PB_HySA_6681:HG2_PB_PB10Xdip_22293:HG2_PB_PB10Xdip_22292:HG4_Ill_svaba_5793:HG4_Ill_manta_1095:HG4_Ill_Krunchall_6476:HG4_Ill_GATKHC_7479:HG4_Ill_GATKHCSBGrefine_3122:HG4_Ill_250bpfermikitraw_6222:HG4_Ill_150bpfermikitraw_5939:HG3_Ill_svaba_5782:HG3_Ill_manta_1015:HG3_Ill_Krunchall_6163:HG3_Ill_GATKHC_7389:HG3_Ill_GATKHCSBGrefine_2984:HG3_Ill_250bpfermikitraw_5973:HG3_Ill_150bpfermikitraw_5784:HG2_PB_assemblyticsfalcon_19388:HG2_Ill_svaba_5676:HG2_Ill_manta_1246:HG2_Ill_Krunchall_6283:HG2_Ill_GATKHC_7381:HG2_Ill_GATKHCSBGrefine_2984:HG2_Ill_250bpfermikitraw_6162:HG2_Ill_150bpfermikitraw_5717:HG4_PB_pbsv_4484:HG4_PB_SVrefine2PBcRDovetail_2278:HG4_PB_SVrefine2Falcon1Dovetail_2733:HG4_Ill_SVrefine2DISCOVARDovetail_3400:HG3_PB_SVrefine2PBcRDovetail_2038:HG3_Ill_SVrefine2DISCOVARDovetail_3412:HG2_PB_SVrefine2PBcRplusDovetail_8085:HG2_PB_SVrefine2PB10Xhap12_3271:HG2_PB_SVrefine2Falcon2Bionano_2143;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5717:HG2_Ill_250bpfermikitraw_6162:HG2_Ill_GATKHCSBGrefine_2984:HG2_Ill_GATKHC_7381:HG2_Ill_Krunchall_6283:HG2_Ill_manta_1246:HG2_Ill_svaba_5676:HG2_PB_assemblyticsfalcon_19388:HG3_Ill_150bpfermikitraw_5784:HG3_Ill_250bpfermikitraw_5973:HG3_Ill_GATKHCSBGrefine_2984:HG3_Ill_GATKHC_7389:HG3_Ill_Krunchall_6163:HG3_Ill_manta_1015:HG3_Ill_svaba_5782:HG4_Ill_150bpfermikitraw_5939:HG4_Ill_250bpfermikitraw_6222:HG4_Ill_GATKHCSBGrefine_3122:HG4_Ill_GATKHC_7479:HG4_Ill_Krunchall_6476:HG4_Ill_manta_1095:HG4_Ill_svaba_5793;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0991736;ClusterMaxSizeDiff=0.0983607;ClusterMaxEditDist=0.24;PBcalls=15;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=-53;DistForward=52;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=69;REFWIDENED=4:46233040-46233108;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4005.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:50:1/1:2:16:5:17:./.:0:0:0:0:1/1:1:36:./.:.:.:.:.:.
chr4	46379984	HG2_PB_PB10Xdip_22294	C	CCCATCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCATCAGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCTGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCTAGCCGCCCCGTCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2144:HG4_PB_pbsv_4485:HG2_PB_PB10Xdip_22295:HG2_PB_PB10Xdip_22294:HG2_PB_pbsv_4460:HG3_PB_pbsv_4349:HG2_PB_SVrefine2Falcon1plusDovetail_8710:HG2_PB_SVrefine2PBcRplusDovetail_8086:HG2_PB_SVrefine2PB10Xhap12_3272:HG3_PB_SVrefine2Falcon1Dovetail_2751:HG4_PB_SVrefine2Falcon1Dovetail_2734:HG3_PB_SVrefine2PBcRDovetail_2039:HG4_PB_SVrefine2PBcRDovetail_2279;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_22294:HG2_PB_PB10Xdip_22295;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0357724;ClusterMaxEditDist=0.222581;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=302;DistBack=-183;DistForward=186;DistMin=-183;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=467;REFWIDENED=4:46379706-46380172;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4006.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:0:17:1:11:./.:0:0:0:0:0/1:9:23:0/1:4:12:.:.:.
chr4	46764228	HG2_Ill_GATKHC_7387	T	TTAATATGTATATTATTTATATATTAAATATATTATATATTTAATATATAATATATTTAATATATAAA	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_19391:HG2_PB_pbsv_4461:HG2_PB_HySA_8392:HG4_PB_pbsv_4486:HG4_Ill_svaba_5795:HG4_Ill_Krunchall_6480:HG4_Ill_GATKHC_7484:HG4_Ill_GATKHCSBGrefine_3123:HG4_Ill_250bpfermikitraw_6228:HG4_Ill_150bpfermikitraw_5944:HG2_Ill_svaba_5678:HG2_Ill_Krunchall_6288:HG2_Ill_GATKHC_7387:HG2_Ill_GATKHCSBGrefine_2985:HG2_Ill_250bpfermikitraw_6168:HG2_Ill_150bpfermikitraw_5723;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5723:HG2_Ill_250bpfermikitraw_6168:HG2_Ill_GATKHCSBGrefine_2985:HG2_Ill_GATKHC_7387:HG2_Ill_Krunchall_6288:HG2_Ill_svaba_5678:HG4_Ill_150bpfermikitraw_5944:HG4_Ill_250bpfermikitraw_6228:HG4_Ill_GATKHCSBGrefine_3123:HG4_Ill_GATKHC_7484:HG4_Ill_Krunchall_6480:HG4_Ill_svaba_5795;NumExactMatchSVs=12;ClusterMaxShiftDist=0.075188;ClusterMaxSizeDiff=0.0597015;ClusterMaxEditDist=0.195489;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=0;DistForward=82;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=65;REFWIDENED=4:46764227-46764294;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4007.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:34:0|1:33:5:3:29:./.:0:0:0:0:0/1:16:19:./.:.:.:.:.:.
chr4	47007786	HG2_PB_SVrefine2PB10Xhap12_3273	ACCT	TTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAATATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGG	20	PASS	ClusterIDs=HG2_PB_pbsv_4462:HG4_PB_HySA_6687:HG2_PB_HySA_8395:HG3_PB_SVrefine2PBcRDovetail_2041:HG2_PB_SVrefine2PBcRplusDovetail_8087:HG2_PB_SVrefine2PB10Xhap12_3273:HG2_PB_SVrefine2Falcon2Bionano_2146:HG2_PB_PB10Xdip_22304:HG2_PB_PB10Xdip_22303:HG2_10X_SVrefine210Xhap12_3280:HG2_PB_assemblyticsfalcon_19394:HG2_PB_SVrefine2Falcon1plusDovetail_8712:HG4_PB_assemblyticsfalcon_18978:HG4_PB_SVrefine2PBcRDovetail_2281:HG4_PB_SVrefine2Falcon1Dovetail_2735:HG3_PB_SVrefine2Falcon1Dovetail_2753:HG2_Ill_MetaSV_3548:HG3_Ill_MetaSV_3714:HG3_PB_pbsv_4351;NumClusterSVs=19;ExactMatchIDs=HG2_PB_PB10Xdip_22303:HG2_PB_PB10Xdip_22304:HG2_PB_SVrefine2Falcon2Bionano_2146:HG2_PB_SVrefine2PB10Xhap12_3273:HG2_PB_SVrefine2PBcRplusDovetail_8087:HG3_PB_SVrefine2PBcRDovetail_2041;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0852974;ClusterMaxSizeDiff=0.0763187;ClusterMaxEditDist=0.214602;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=428;DistBack=-4;DistForward=2102;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:47007790-47007785;PctSeqSimilarity=1;PctSizeSimilarity=0.993;PctRecOverlap=0.9954;SizeDiff=-3;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4008.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:87:1/1:0:23:0:19:./.:0:0:0:0:1/1:0:19:1/1:3:124:.:.:.
chr4	47496517	HG2_PB_SVrefine2Falcon1plusDovetail_8715	T	ATAAGTTAGATTATCACGCCTGTAGTCCCAGCACTTTGGGAGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGAGCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGCGCGGTGGCGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8715:HG3_PB_pbsv_4353:HG2_PB_assemblyticsfalcon_19400:HG2_Ill_breakscan11_3432:HG2_PB_HySA_8402;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8715;NumExactMatchSVs=1;ClusterMaxShiftDist=0.135177;ClusterMaxSizeDiff=0.135177;ClusterMaxEditDist=0.187404;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=4;DistForward=33957;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:47496518-47496516;PctSeqSimilarity=0.9816;PctSizeSimilarity=0.9697;PctRecOverlap=0.9698;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4009.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:33:0|1:26:2:1:20:./.:0:0:0:0:0/1:24:10:0/1:6:27:.:.:.
chr4	48162876	HG3_Ill_GATKHC_7415	G	GAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	20	PASS	ClusterIDs=HG3_PB_HySA_6844:HG3_Ill_svaba_5798:HG3_Ill_GATKHC_7415:HG3_Ill_GATKHCSBGrefine_2992:HG3_Ill_150bpfermikitraw_5806:HG2_Ill_svaba_5695:HG2_Ill_scalpel_4370:HG2_Ill_GATKHC_7407:HG2_Ill_GATKHCSBGrefine_3000:HG2_Ill_FB_4045:HG2_Ill_150bpfermikitraw_5745:HG2_PB_HySA_8411;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5745:HG2_Ill_FB_4045:HG2_Ill_GATKHCSBGrefine_3000:HG2_Ill_GATKHC_7407:HG2_Ill_scalpel_4370:HG2_Ill_svaba_5695:HG3_Ill_150bpfermikitraw_5806:HG3_Ill_GATKHCSBGrefine_2992:HG3_Ill_GATKHC_7415:HG3_Ill_svaba_5798;NumExactMatchSVs=10;ClusterMaxShiftDist=0.171429;ClusterMaxSizeDiff=0.171429;ClusterMaxEditDist=0.228571;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=1;DistForward=17326;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=4:48162861-48162885;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4010.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:25:0|1:41:7:3:14:./.:0:0:0:0:0/1:16:9:./.:.:.:.:.:.
chr4	52948111	HG2_PB_SVrefine2PB10Xhap12_3281	G	GGTTTCTGTCGATCCATTAATTACCCCTCTTTGGATATGATCATTTAATTAGTTTCCAATCCACCTACTTAAGTTAATCATCCTCCTATATTTCTTTTATTTTGTCCACAAAGACAGCATGAAAAATTCTATGGGAAGCCTGATGGGAA	20	PASS	ClusterIDs=HG3_PB_HySA_6889:HG2_10X_SVrefine210Xhap12_3295:HG4_PB_HySA_6735:HG4_PB_pbsv_4513:HG2_PB_HySA_8443:HG3_PB_pbsv_4385:HG2_PB_PB10Xdip_22335:HG2_PB_pbsv_4493:HG2_PB_PB10Xdip_22334:HG4_PB_SVrefine2Falcon1Dovetail_2744:HG3_PB_SVrefine2PBcRDovetail_2046:HG3_PB_SVrefine2Falcon1Dovetail_2763:HG3_Ill_SVrefine2DISCOVARDovetail_3427:HG3_Ill_MetaSV_3721:HG3_Ill_250bpfermikitraw_6033:HG2_PB_SVrefine2PBcRplusDovetail_8101:HG2_PB_SVrefine2PB10Xhap12_3281:HG2_PB_SVrefine2Falcon2Bionano_2158:HG2_PB_SVrefine2Falcon1plusDovetail_8727:HG4_PB_SVrefine2PBcRDovetail_2292:HG4_Ill_SVrefine2DISCOVARDovetail_3413:HG2_Ill_SVrefine2DISCOVARplusDovetail_9427;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8727:HG2_PB_SVrefine2Falcon2Bionano_2158:HG2_PB_SVrefine2PB10Xhap12_3281:HG2_PB_SVrefine2PBcRplusDovetail_8101:HG3_Ill_250bpfermikitraw_6033:HG3_Ill_MetaSV_3721:HG3_Ill_SVrefine2DISCOVARDovetail_3427:HG3_PB_SVrefine2Falcon1Dovetail_2763:HG3_PB_SVrefine2PBcRDovetail_2046:HG4_PB_SVrefine2Falcon1Dovetail_2744;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0846906;ClusterMaxSizeDiff=0.0841424;ClusterMaxEditDist=0.240506;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=148;DistBack=47592;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=147;REFWIDENED=4:52948112-52948258;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4011.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:1:25:2:13:./.:0:0:0:0:1/1:1:41:./.:.:.:.:.:.
chr4	52996325	HG2_PB_SVrefine2Falcon2Bionano_2159	G	GCCTGTAAGCCCCTGACTGCATTTAAGCTGATTCTCCCTCTCCTTTGGTTTCCTTCCACATGAGAAGTCAGGCCTTCCCCAAGGGCACAAATTTTATAAGCCAAATAAAGAAGAAGCAGATTCATTTTAAAGGACACTGGGCTGACACTGGTGTTCTCAAATCTGAATGAGAAAAGCCTAATTTGTAATTTCAACATGTTGTCCTTCATGTACCCATATAAGAAAGCCAAAGGACCTGAGAATCATTGATACAGTTAAAAACAAATCTTTGTGTAACTATGCTGAGTTTATAGGTGCTTTTACATAAGCCATCTTATTTGTCTCTTCAACAAATCAATAAGATAGGAGTAACAGATAGTACTATTATTTATATTTTATGCCTAGGGAAAACAGCTCAAAGTGTGTCTGTCTGTGAATACGTAGCTAATCGACCTAGCAGAACAAGAACACAAACTCAGGTCTTTTGACTACAGAGCTTATTATGCTATCCTGCTCACTTACAAATAAAAATTACAAGGTTTTGGATGAACCACTTGTGTCATAATTTCCACATAGATATAATAACCATGTATTATAAAATCCTCGAATTGTAATGAGTACATGACACAATATTAGCACTACTCCCCACTCTGACTTGTTCAGTGCCTCTCACATCACCATGCACATTTTCATTGCATCCACTATGGTTACTATTTTACACCATTTTATGGTGTAAATGGTGTTTTGGGTTTTTTTTTCTTTGTTTTGTTTTGTTTTGAGACGGAGTCTCGCTCTGTCACACAGGCTGGAGTACAGTGGTGTGATCTTGGCTCACTGACAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAATAGCTGGGGCTAGAGGTACCTGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTGGCCAGGAAGATCTCGATCTTCTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTAGGATTACAAGCGTGAGCCACCACGCCCAGCCATAAATGGTGTTTTTAAGCAATTTTATGGTGCTAATTAAGCAATAGATTAATGTGCTTCTCTTGCACTAGACTTTAAGCTCCATGAGGGGAGGGAGAATATCTGATTTTGCTCATGTTGAATTCCCAGTAGCGTTCTTGACATGTAGTAAGTGCTTAATAAATATTTGTTGAAGGAATGAATAAAAAACCAAGGTGCAGTAGCTAGTGCTTTGATTTGGGGCTCTGTTCTCAACTAGAAGTTAAGGAAGGCTGTCAGAAGCTGAAGGCCAAGGGAAAATATTCATAAATGTGTTTAAGGCCGTTATTGGACAACAGAGTTAATCAGGAGAGAAAGCTAGGCATCCTTT	20	PASS	ClusterIDs=HG3_PB_pbsv_4386:HG2_PB_SVrefine2Falcon1plusDovetail_8728:HG2_PB_pbsv_4494:HG3_Ill_SVrefine2DISCOVARDovetail_3428:HG2_PB_SVrefine2Falcon2Bionano_2159:HG2_10X_SVrefine210Xhap12_3296:HG3_PB_SVrefine2PBcRDovetail_2047:HG2_Ill_breakscan11_3433;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3296:HG2_PB_SVrefine2Falcon2Bionano_2159:HG3_Ill_SVrefine2DISCOVARDovetail_3428;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0327752;ClusterMaxSizeDiff=0.0306377;ClusterMaxEditDist=0.22982;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=1384;DistBack=48067;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:52996326-52996327;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4012.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:44:0|1:32:2:0:29:./.:0:0:0:0:0/1:23:17:0/1:37:92:.:.:.
chr4	53066097	HG2_PB_HySA_8444	G	GGTGGTGGTGTGTGGGGTGTGTGTATGCTGTGTGGGGTGTATGTGTGGTGTGTGGGATGTGTGTGTGTGGTATGTGTGGTGGTGTGTCTGTGGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGGGTGTGTGGGGGGTGTATGTGTGTGTGTAGTGTATGTGTTTGGTGTGTGGTGTGTGTGGTGGTGTGTGGGGAGTGTGTGGGGTGTGTGGGGTGTGTGTGGTGTGTGGGGGTGTGTGTGTGCTGTGTGGGTGTGTGTGTGTGTGTGTGTGGCATGTGGTGTGTGTGTGTTGTGTGTTGGTGTGTGTGTGTGTGTGTGTGGATGTGTGTGTGTGGTGTGTGTGAGGGGTGTGTGGAGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGGGGTGCATGTGGGGTGTGGTGTGTGGGGCGTGTGGGGTGTGCGTGTGGTGTGTGGGGTGTGTGTGGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGTGTATGGTGTGGTGTGTGTGGGTGTGTGAGGGGTGTGGGGGGTGTTTGGGTGCATGTGGTGTGTGTGTGGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGGTGTGTGGAGTATGTGGGGGGTGTGTGTGTGGTGTGTGGTGTGTGTGTGTGGT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2764:HG2_PB_PB10Xdip_22337:HG3_PB_pbsv_4387:HG2_PB_HySA_8445:HG4_PB_pbsv_4514:HG2_PB_HySA_8444:HG2_PB_PB10Xdip_22338:HG4_PB_HySA_6736:HG2_PB_pbsv_4495:HG2_PB_SVrefine2Falcon2Bionano_2160:HG3_PB_SVrefine2PBcRDovetail_2048:HG2_PB_SVrefine2PB10Xhap12_3283:HG2_PB_SVrefine2PBcRplusDovetail_8102:HG2_PB_SVrefine2Falcon1plusDovetail_8729:HG4_PB_SVrefine2PBcRDovetail_2293:HG4_PB_SVrefine2Falcon1Dovetail_2745;NumClusterSVs=16;ExactMatchIDs=HG2_PB_HySA_8444;NumExactMatchSVs=1;ClusterMaxShiftDist=0.154613;ClusterMaxSizeDiff=0.154613;ClusterMaxEditDist=0.262987;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=647;DistBack=-99;DistForward=4;DistMin=-99;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=524;REFWIDENED=4:53065645-53066168;PctSeqSimilarity=0.966;PctSizeSimilarity=0.9428;PctRecOverlap=0.9444;SizeDiff=37;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=95;MatchId=4013.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:0:26:0:14:./.:0:0:0:0:./.:1:3:0/1:17:111:.:.:.
chr4	53155149	HG2_Ill_GATKHCSBGrefine_3019	C	CGGAGCAATTACCAGGACTATTTAGGAACTGTTCATTTGCTCATCCAGCAACTTAAAGAGCACCCAGAATACACTAGACAATAAAGAA	20	PASS	ClusterIDs=HG4_Ill_GATKHCSBGrefine_3149:HG4_PB_pbsv_4515:HG2_PB_PB10Xdip_22340:HG3_PB_pbsv_4388:HG2_PB_PB10Xdip_22339:HG4_Ill_Krunchall_6594:HG4_Ill_GATKHC_7569:HG4_Ill_GATKHCSBGrefine_3150:HG3_Ill_250bpfermikitraw_6038:HG2_Ill_250bpfermikitraw_6242:HG2_10X_SVrefine210Xhap12_3297:HG3_Ill_manta_1021:HG3_Ill_Krunchall_6255:HG3_Ill_GATKHC_7486:HG3_Ill_GATKHCSBGrefine_3009:HG2_Ill_Krunchall_6362:HG2_Ill_GATKHC_7475:HG2_Ill_GATKHCSBGrefine_3019:HG3_PB_HySA_6894:HG2_PB_HySA_8448:HG2_PB_pbsv_4496:HG4_Ill_GATKHC_7568;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3019:HG2_Ill_GATKHC_7475:HG2_Ill_Krunchall_6362:HG3_Ill_GATKHCSBGrefine_3009:HG3_Ill_GATKHC_7486:HG3_Ill_Krunchall_6255:HG3_Ill_manta_1021;NumExactMatchSVs=7;ClusterMaxShiftDist=0.118919;ClusterMaxSizeDiff=0.118919;ClusterMaxEditDist=0.309392;PBcalls=7;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=87;DistBack=240;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=88;REFWIDENED=4:53155079-53155166;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4014.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:0:32:3:34:./.:0:0:0:0:1/1:2:40:./.:.:.:.:.:.
chr4	53851835	HG4_Ill_GATKHCSBGrefine_3151	T	TAAAAAATTAGTCCAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCATTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3434:HG4_PB_pbsv_4517:HG3_PB_pbsv_4392:HG3_PB_HySA_6898:HG4_Ill_manta_1100:HG4_Ill_GATKHCSBGrefine_3151:HG3_Ill_GATKHCSBGrefine_3010:HG2_Ill_GATKHCSBGrefine_3020:HG2_PB_SVrefine2Falcon1plusDovetail_8731:HG3_PB_SVrefine2Falcon1Dovetail_2765:HG4_PB_SVrefine2Falcon1Dovetail_2747:HG4_PB_HySA_6740:HG2_PB_pbsv_4501;NumClusterSVs=13;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_3151:HG4_Ill_manta_1100;NumExactMatchSVs=2;ClusterMaxShiftDist=0.12966;ClusterMaxSizeDiff=0.119935;ClusterMaxEditDist=0.162075;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=37699;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=4:53851836-53851852;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4015.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:39:1|0:7:26:34:2:./.:0:0:0:0:0/1:32:8:0/1:7:36:.:.:.
chr4	54789961	HG2_10X_SVrefine210Xhap12_3300	CATGGTGGC	TGTGATGGTACACGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCTGAGATTGGCCACTGCACCCCAGCCTGGTGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAGTTTAAAGTTAAAACTAATTTTTAATGGTAAAGTAAAAAGAAAGCCAGCCAACGGAAACAAAGACAGGGGTCAATTCACAAACGTTCCTTATGAACTCCGTGTCTACCCGTGCCGGGGGAATATTGGAGCCTGCTTGGATCCTTAGGGTCTGTACATACCAGAATGTGTAGAGAGGAAAAGAGAGATAATTTAAACAAACTCCCAGAAATTAAGTCCAGTTGAGCACAGGCTGCCCACTGACCTCTCAGAAAGCCTTCGCCTCTCCCAAAGGTGCCGCTATTGTTCAAATCTACAGAGAATCCACTATGGGACCACAAAGCGCACAGCACTAAGGCAGGCCAAGTGCTTCAGAGACACAGCTGTTGCTCCCACCCCTCTTCCATTAGGCTTAGCTGCTCCAGAGAAATCCAGAGAAGCTTTTCAGCTGCCCCACAAGGAGACACAAACAGGCTGGAAGCTTTTAGACAGGACATCCTAGGAAATGATTAAAGGTGAAATTCTGCCTTCCTGGCCCAGACTAATCATTCCAATGGCACCAGGATAGCCAAGGAGAGTACTCCTACATCCATGTCAGCCAGGAAGGTGGCAAGGAAGTCAGGTACAAAGCTGTGATCCAGGAACCCTTAGGACTCTGCCTCCAGGGACTGAGATGGGTTCAGGACAGGCCTGAACATTTTTCTTCAGCTCTGCAGCTGTGGCATCATGGGTTAGAGTCCTGGGTTAAGTCACTCTGGGCAAGTCACACAACCTGCAGAGCCTCATATTTCTCTTTGGTAAAATAAAGATGGTAATACCTACTTCCTAGAGTTCATGTGGAGAATTAAATATGCCATTATATGCAAAACACTTACAATCGTACTTTACATAAAAGTTAGCTATGTGTATGTTAGCTATAATTTTACTATTATTAAAATATTTAGTGCAGTGCCTGGCACATCACAGGCACTTGAGAAATAGGAACTAGTGTGACTTAGGGTTAGGTTAGACCTGAAATCTTAGGCGATCTTGAGATGCTGAGATTCATCCAAAATCTGCATATAACCTTCAGAAAGAAAGAGACAGAGGAAAAAACAAAAGTTCATGTTTTCAAAATAAGCAAAAAACAAATATTTATTAGACACCTGCTATTTGCCAGGCATTTTGCAAGGCACTGGAAATGCAATGGTGAGTTAGAGAAAGTTCCCTCCTGATGCTAGGCCATTTTAGGAAAATTTGACTGATTGTTTTGAACCTTCTTTTTTTTTTCCTTTTGGTTTAGCATTTCTTTTCTTTTTTTTTTTTTTAATTACT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2296:HG4_PB_pbsv_4521:HG3_PB_HySA_6905:HG2_PB_pbsv_4503:HG2_PB_HySA_8462:HG3_PB_pbsv_4395:HG4_PB_HySA_6744:HG2_PB_SVrefine2Falcon1plusDovetail_8733:HG2_PB_SVrefine2PBcRplusDovetail_8104:HG3_Ill_SVrefine2DISCOVARDovetail_3432:HG2_Ill_SVrefine2DISCOVARplusDovetail_9433:HG2_10X_SVrefine210Xhap12_3300:HG2_PB_SVrefine2Falcon2Bionano_2162:HG3_PB_SVrefine2Falcon1Dovetail_2767:HG4_PB_SVrefine2Falcon1Dovetail_2749:HG2_PB_PB10Xdip_22379:HG2_PB_SVrefine2PB10Xhap12_3285;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3300:HG2_Ill_SVrefine2DISCOVARplusDovetail_9433:HG3_Ill_SVrefine2DISCOVARDovetail_3432;NumExactMatchSVs=3;ClusterMaxShiftDist=0.227904;ClusterMaxSizeDiff=0.227904;ClusterMaxEditDist=0.284226;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=1432;DistBack=2057;DistForward=4377;DistMin=2057;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:54789970-54789960;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9993;PctRecOverlap=0.9931;SizeDiff=1;StartDistance=-7;EndDistance=1;GTMatch=0;TruScore=99;MatchId=4016.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:68:0|1:35:0:0:38:./.:0:0:0:0:0/1:28:11:0/1:51:81:.:1475:.
chr4	55021049	HG4_Ill_SVrefine2DISCOVARDovetail_3417	T	CCTGAGCTAGACATAAAGGTTCTCCAAGGCGCCACCAGAGCAGCTAGATACAGAGTGTCGATTGGTGCACTCACAAACCCTGAGCTAAACACAGGGTGCTGATTGGTGTGTTTACAAACCTTGAGCTAGATACAGAGTGCCAATTGGTGTATTTACAATCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3301:HG4_PB_pbsv_4522:HG2_PB_SVrefine2Falcon1plusDovetail_8734:HG3_PB_pbsv_4396:HG3_PB_SVrefine2Falcon1Dovetail_2768:HG4_PB_SVrefine2Falcon1Dovetail_2750:HG4_PB_SVrefine2PBcRDovetail_2297:HG4_Ill_SVrefine2DISCOVARDovetail_3417:HG3_Ill_SVrefine2DISCOVARDovetail_3435:HG2_Ill_SVrefine2DISCOVARplusDovetail_9436:HG2_PB_PB10Xdip_22380:HG2_PB_SVrefine2PBcRplusDovetail_8105:HG2_PB_SVrefine2PB10Xhap12_3286:HG2_PB_SVrefine2Falcon2Bionano_2163;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9436:HG3_Ill_SVrefine2DISCOVARDovetail_3435:HG4_Ill_SVrefine2DISCOVARDovetail_3417:HG4_PB_SVrefine2PBcRDovetail_2297;NumExactMatchSVs=4;ClusterMaxShiftDist=0.097561;ClusterMaxSizeDiff=0.0785498;ClusterMaxEditDist=0.228739;PBcalls=10;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=160;DistBack=-2297;DistForward=108;DistMin=-2297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=281;REFWIDENED=4:55020898-55021178;PctSeqSimilarity=0.9979;PctSizeSimilarity=1;PctRecOverlap=0.4969;SizeDiff=0;StartDistance=81;EndDistance=81;GTMatch=0;TruScore=83;MatchId=4017.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:1:29:0:18:./.:0:0:0:0:0/1:5:13:./.:.:.:.:.:.
chr4	55860104	HG2_Ill_SVrefine2DISCOVARplusDovetail_9444	G	GTCTGGTGGGGACTTGGAGAAGCTTTATGTCTAGCTAAGGGATTGTAAATACACCAATCGGCACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAGGGTTTGTGAATGCACCAATCAACACTCTGTATCTAGCTAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9444:HG4_PB_pbsv_4529:HG3_PB_HySA_6911:HG2_PB_pbsv_4511:HG2_PB_HySA_8472:HG3_PB_pbsv_4402:HG2_PB_PB10Xdip_22388:HG2_PB_PB10Xdip_22387:HG4_Ill_GATKHCSBGrefine_3167:HG4_Ill_250bpfermikitraw_6301:HG3_Ill_GATKHCSBGrefine_3021:HG3_Ill_250bpfermikitraw_6053:HG2_Ill_MetaSV_3558:HG2_Ill_GATKHCSBGrefine_3031:HG2_Ill_250bpfermikitraw_6255:HG3_PB_HySA_6910:HG4_PB_SVrefine2PBcRDovetail_2302:HG4_PB_SVrefine2Falcon1Dovetail_2756:HG4_Ill_SVrefine2DISCOVARDovetail_3424:HG3_PB_SVrefine2Falcon1Dovetail_2773:HG3_Ill_SVrefine2DISCOVARDovetail_3440:HG2_PB_SVrefine2PBcRplusDovetail_8111:HG2_PB_SVrefine2PB10Xhap12_3289:HG2_PB_SVrefine2Falcon2Bionano_2170:HG2_PB_SVrefine2Falcon1plusDovetail_8740;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9444:HG4_PB_SVrefine2PBcRDovetail_2302:HG4_PB_SVrefine2Falcon1Dovetail_2756:HG4_Ill_SVrefine2DISCOVARDovetail_3424:HG3_PB_SVrefine2Falcon1Dovetail_2773:HG3_Ill_SVrefine2DISCOVARDovetail_3440:HG2_PB_SVrefine2PBcRplusDovetail_8111:HG2_PB_SVrefine2PB10Xhap12_3289:HG2_PB_SVrefine2Falcon2Bionano_2170:HG2_PB_SVrefine2Falcon1plusDovetail_8740;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0668693;ClusterMaxSizeDiff=0.0547112;ClusterMaxEditDist=0.278107;PBcalls=15;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=160;DistBack=51418;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=180;REFWIDENED=4:55860105-55860284;PctSeqSimilarity=0.9973;PctSizeSimilarity=1;PctRecOverlap=0.8696;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=95;MatchId=4018.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:1/1:0:23:4:18:./.:0:0:0:0:0/1:3:19:./.:.:.:.:.:.
chr4	56612219	HG2_PB_SVrefine2PB10Xhap12_3290	G	GGATGTTTTTTCCTTGCGTTTTCCTTGTTTCAACTCTAGTTATTGACATTAGCATTTACATTTTACAACAGAACATTAATTTCCAAAAACATCCTAAGACTTCCGGGGCTTAGGTGTGTATCAGTCGGGGTAGGCTAGGTTACCCTGCAGTATCGAACAACCTGAAAAGTCTCAGCAGCTTAAAACAATACTTATTTCTCCCCAGGTGCACATCTATTATGGGTCAGCAATGAGCTTTGCTTGCTCATGGAAATCACCAGGAAATTCAAGCCAGAGGCTCCATCCTGACAAACCCAGAGGCAGAACATAACTAACCACGCGGGGGCTCTTGAAGCTTCTGCCCAGAAATGACACACATCATTTCCACTCATATGGGGTTTTGTATTTTTTGTTTTGTTCTTAAATTTTCATTTATTTTAATAGACAAAACATGTTTTGAAATATGTATGTATTTTTGAAATATGTATGCATTTAGAATTGTGAAATGGCCCTGCTTACATATCACTGGCCAAAACAAGTCACATTACCAGGCCTGCCATCAACGAGGGGGCGGATGAATAACTCTTCCCCAGGGAGAGTTACCGAAGGTTTATAAGTGATAGAGTCTTCCACAAGCTTTAGGATTACCTTACAGCTGGGACTATAGTTTACCAAATAGGCTCATCCACATCATCTCACTGGATCTTGATAACATCCATATGATGCCAAGGGCAGGAAGGGTGCGGGCCGGTAGCAACAGCAGGCACTGCAGAATATTTAAGCAGAACTAATCAGTGTTACCTGCTTCTGCTATTCCTGGTCTTCCACATCAGCCAGTCAGGGAGCAAAGAATAGGACAAAGCCAGACCAATAGTAGAAGGAAAATCACAGCTGCTTCCAAATTGCCCTCACATTTACCAATTTCATCCACCCTGGGTCCTGCCTTTGGAGTGCTCCCCATTCCTCCTGCTCTCTGACATCCCCAGGAATGGAGAGGGAGGCACCAGAGGGGAGATGACTGACAGGACAGGGCCACAGTGAGACATATTGAGACCCACCAGGGGTCATCTGCTCTGAGGTCACAGAGCTATGCTGCAGTGCAGCTGCATCCCTGGATAGTAATAGAAATATTATATAAGAACACAGGGCACCTGCTCCAAGTCAACCCTTGTTGAATAAATAATAATAACACTGTGTAACAGGTAATTGTGAGCATGTGCTTCTTCTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTGAGGGGGAGTCTCGCTCTGTTGCCCAGGCTGAAGTGCAGTGGTGCAATCTCGGCTCACTGAAACCTCCGCCTCCCGGGTTCAAGCGATTCTCTTGCCTCAGCCTCCTGAGTAGCAGGGATTACAGGCGCGCACCACCAGGCCTGGCTAATTTTGTATTTTTAGTAGTGATGGAATTTCATCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCCAGAGCATGTGCTTCTTAGTTGATAAAACTTAGCCAGGTTCAAGTGTGCTGGGCCTTTTGATCTCCAACAGGGGCCCAACATTACGATGGCTCACCTATTGTTCCCAACCCAGCTGTCAACCCAGCTCTCTGTTTCTGCCACAGTGGTGGGTAAATTCCCCTCGCCATAGTCATCACAGTCACAGCATCCTTCCCTCCTAGAAGAGTCGAAATGCAGACAGTAGTAGTTTGTCAGCTGAGTCTCTCTGTTCCTTCCTGGATGACTGCCGCCATCCTGAAGCTCCAGGTACTGTTCTGCACTCCCTAAGGGTGTAGTAAAAGGAGTCCACAGCACTAGAGTGGGTCCCAGAGCCTCTTACCCGGACCCTCCACCTGTCTGCTCTAGGCAGTGGAGCACAGTGAGTAAGCACACAGGTGCTTACTCAGACAGACCTCAGCTCAAACCTGACTCCATCACTTGCCAGTTGCCTGTCTTTCAACAACTGTTTGCTCTTGCATTAACTCCTTTTTAAAGTGGAAATGAGAATAATAGTAGTTACTGCCCAGGCTTATTGTAAGGTTTAAATGAGTTCTGATGGTAAAGCATTTACCCGCCACTGTGGCAGAAACAGACAGCTGGGTTGGGAACAATAGGTGAGCCATCGTAACCTTGGGCCCCTGTTGGAGACCAAAGGGCCCAATACCTCGAAAGCCCTTTTGTCATCTCTGCTTCCTCCCGGGGGGAGTGAAAGCTAGTGTCTCATGATGCCTGACCTGCAGAAATCACCCAATTATGCTGACTGTCACTATGTTAGTTGTCATGACAATTATAATGTGCTTCTCAGCTGCGTAGAAGACAATACACCTCCCCCTCCTGCCTTGGGCCAGGGCTTCCAGGACCCTACTGTAAAGCTGTTATAGGAAACTGGCTCTTGCACTCTCCCCCTAACCCAGCAGAACAAGGAAGCCACATGCCTTCCCTCCAAGGCCCCAGAAGTCTCTTGTTTTGTTCTCTCAGAAGCAAAAAGTACAATGACTTGAATTCTCCCCACCAGTCCCTTCCATTCCCGAACTTGGGGCTGAAGTGTCTCCTGAACGAAACCCCTACCCCACACTTGTACTTTCTATTTGTCCTTCCATCTTTGCAAACCTTGCTCCTCCAGGGTCACCAAACACTAAACGAGATGCCTGCCATGCACTACAAAAATTAACACTCATTAATCACAGACTATGTTGTAATGTGAATAAAGAAAAACAAAATTAGCTTTAAAATGCTTAGAAAATGACATCCATTAAATTTAGAGGCTCACAAAGTCCAAGGCATCTCAACTCCTAAATTCTTAAGTCCCATTACATTGTTTCTTCCTCATGGTGTTCTGCCTACTGCCCACGATTCCTATTGAGCAAATGTAGAGCAAATTAATTTGTTTTTCATCTTTTGACAGGTTTCATGGTATTTAGAGGAAAATAAAAGTGTTTTATTGATTCGACAGTGAATCTGAAAGGCTTTCACATCTATCCTCAAGTCAATGAGTGCTCTAAGGGTATAGATCATCAAAAATAAAATCAAGGGCTTAAAATATAAAGAAAGAAAAGGAATAGCTGTCATATCACTGGAGTCCTCTGGAAAGCAAACTTTAATGCTAAAACTGTCAATAAATTGATTGCATAGCATAAAGTTGTGCAAACAGCCCTAGGGTGGGAAGGCATTTGCTGTGTGCAAGGAACAGAAGGAAGGCCCCACACAATCTAGAGCATGGTGGGTGAAGACGTAACAGGTGTGAGATGTCAGAGAATGATGTGGTACATTAAGTTATTAGCCTCACTCTGCCACACACACACACACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGTCCTTTGACATGTAACTTTGCAGTGCACCCATGAAAGAGAGAGTATATTTCCCACCCCTGGACTTTGGGTTTGCCATGAAATTTTCTTTGGTCAATGAGATATTAGTGGATGTGACACAAGAAGTGTGCTCAAATACATAGGTACACCTCTTGTGCTCTGCCGTTGCCTATTGGTGTCTGGTCCCAAGAGGTGAATGAGAGACAAAGGGCAGAATGTCCCCACACCACCCTGCCACATGAAGCCAAGCTGCCCAGTCCACAGAGCCTGCATCAGCCAGTCCCCACCCAACCTGCAGGCATGTGAACAAACCAGCTTCAATTGGCAGAACTGCCCTGGCTGCCTGGCAGCCCCATGAGAAAAAGAGCTGTTTTATACCTGAGTTTTCAGTGCATTTTGTTACTCAGTATTATTGTGCCAATATCTAACCATTACCAATGGTGACACTTTAGATTTTTGACTTGCATCGGATTACGGTGAAATTACTGAAATTAAGAAGTTCCAGCAGAGAAGCAGTTTGGGGAGAACACTAGAGTTCTCTTTTGGCTGTGTTGACTATGAGGTGCTAATCTAACAGACAGTTGGGGGGAATATTCTCTTGTTATCTTGGAATTGCCAGCAAGACTTGTACTGAAAAGAAAAGGTCCTCAGGACCCCACATTCTAAAGATAGCCACCAATGAACCACCAGCATTGTGACCCAAGATGATCCCCACAGGGCTCACTAAGAGAAGCCAGAACTCATCCACCACCTTCCAACTCCCTTCCTCCTACCTGAAGTCATAAGAGAATGACTAGAGGGACTGGGAGGTTGGCCCTGTGGACAGAGCAGTGATGGTGGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3437:HG4_PB_pbsv_4531:HG3_PB_pbsv_4404:HG2_PB_pbsv_4512:HG4_Ill_SVrefine2DISCOVARDovetail_3432:HG2_10X_SVrefine210Xhap12_3312:HG2_PB_SVrefine2PBcRplusDovetail_8112:HG2_PB_SVrefine2PB10Xhap12_3290:HG4_PB_SVrefine2PBcRDovetail_2303:HG2_PB_SVrefine2Falcon1plusDovetail_8741:HG3_Ill_SVrefine2DISCOVARDovetail_3446:HG2_Ill_SVrefine2DISCOVARplusDovetail_9450:HG4_PB_SVrefine2Falcon1Dovetail_2757:HG3_PB_SVrefine2Falcon1Dovetail_2774:HG2_PB_PB10Xdip_22394:HG2_PB_PB10Xdip_22393;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3290:HG2_PB_SVrefine2PBcRplusDovetail_8112;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0467106;ClusterMaxSizeDiff=0.0460169;ClusterMaxEditDist=0.159708;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=4228;DistBack=17742;DistForward=5062;DistMin=5062;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:56612220-56612221;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9986;PctRecOverlap=0.9986;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4019.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:97:1/1:2:19:1:15:./.:0:0:0:0:1/1:0:45:1/1:1:360:.:4112:.
chr4	58917514	HG2_PB_SVrefine2PB10Xhap12_3294	T	TTGCTGCTTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3438:HG4_PB_pbsv_4541:HG2_PB_pbsv_4518:HG3_PB_HySA_6935:HG2_PB_assemblyticsPBcR_18824:HG2_PB_HySA_8497:HG3_PB_pbsv_4419:HG4_PB_SVrefine2Falcon1Dovetail_2764:HG2_PB_SVrefine2Falcon1plusDovetail_8744:HG2_PB_SVrefine2PBcRplusDovetail_8115:HG2_PB_SVrefine2PB10Xhap12_3294:HG2_PB_SVrefine2Falcon2Bionano_2172:HG3_PB_SVrefine2Falcon1Dovetail_2782:HG2_PB_PB10Xdip_22399:HG2_PB_PB10Xdip_22398;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2172:HG2_PB_SVrefine2PB10Xhap12_3294:HG2_PB_SVrefine2PBcRplusDovetail_8115;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0830728;ClusterMaxSizeDiff=0.0830728;ClusterMaxEditDist=0.166075;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1094;DistBack=24062;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:58917515-58917529;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4020.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:87:1/1:5:17:0:21:./.:0:0:0:0:1/1:0:13:./.:23:286:.:1100:.
chr4	58976319	HG2_PB_SVrefine2Falcon1plusDovetail_8745	C	CATATGTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCA	20	PASS	ClusterIDs=HG3_PB_HySA_6937:HG2_PB_pbsv_4519:HG3_PB_pbsv_4420:HG3_Ill_SVrefine2DISCOVARDovetail_3459:HG2_PB_SVrefine2Falcon1plusDovetail_8745:HG3_PB_SVrefine2PBcRDovetail_2051:HG2_PB_HySA_8498;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8745;NumExactMatchSVs=1;ClusterMaxShiftDist=0.265487;ClusterMaxSizeDiff=0.265487;ClusterMaxEditDist=0.265487;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=108;DistBack=1;DistForward=8;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=4:58976320-58976330;PctSeqSimilarity=0.9864;PctSizeSimilarity=0.973;PctRecOverlap=0.982;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4021.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:46:0|1:34:0:1:43:./.:0:0:0:0:./.:35:2:./.:.:.:.:.:.
chr4	59060347	HG4_Ill_GATKHCSBGrefine_3179	A	ATGTGTGTATATATGTGTATATATACACACACGTGTGTGTATATATACATACATGTGTGTGTGTATCTGTGTGTATATATACACACACG	20	PASS	ClusterIDs=HG3_PB_pbsv_4421:HG2_PB_HySA_8502:HG4_PB_pbsv_4542:HG2_Ill_breakscan11_3439:HG2_PB_pbsv_4520:HG4_Ill_manta_1106:HG4_Ill_Krunchall_6634:HG4_Ill_GATKHC_7615:HG4_Ill_GATKHCSBGrefine_3179:HG4_Ill_250bpfermikitraw_6321:HG4_Ill_150bpfermikitraw_6040:HG2_Ill_manta_1258:HG2_Ill_GATKHCSBGrefine_3040:HG2_PB_PB10Xdip_22402:HG2_PB_PB10Xdip_22401;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3040:HG2_Ill_manta_1258:HG4_Ill_150bpfermikitraw_6040:HG4_Ill_250bpfermikitraw_6321:HG4_Ill_GATKHCSBGrefine_3179:HG4_Ill_GATKHC_7615:HG4_Ill_Krunchall_6634:HG4_Ill_manta_1106;NumExactMatchSVs=8;ClusterMaxShiftDist=0.120879;ClusterMaxSizeDiff=0.10989;ClusterMaxEditDist=0.239583;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=570;REFWIDENED=4:59060068-59060637;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4022.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:44:1|0:2:38:20:4:./.:0:0:0:0:0/1:6:38:./.:.:.:.:.:.
chr4	59622451	HG3_PB_pbsv_4426	G	GTGAAGAAATCTCATCATCACTGGCCATACAGAGAAATGCAGAAATCAAAAGCACTATGAGATATCATCTCAGCACCAGTTTTAGAATGGCAATCTTAAAAAGTCAGGACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTTACAAGACTGTTGGTGGGACTGTCAACCTAGTTCAAACCATTGTGGAAAGTCAGTGTGGCGATTCCTCAAGGATGCTATGAACTAGAAATACCATTTGACCCAGCTATCCCATTACTGGGTATATACCCAAATGATATAAAATTCATGCCTGCTATAAAGAACACATGCATCACGTATGTTTATGGCGGCACTAATCACAAATAGAAGCAAAGACTTGGAAACCAACCGCAAAATGCCCCCAACAATGATAGACTGGATTAAGAAATGTGGGCAGCCATATACAACCATTGAATACTTGCAAGCCATAAAAATGATGAAGTTCATATCCTTTGGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGGGCACGAGAACAAAAAACCAAACACCAGCATATTCTCACTCATAGGTGGTAATTGAACAATGAACGATCCACATGGACAACAGGAAGGGAATATCACACTCTGGGACTGTGGTGGGGTCGGGGAGGGGGGTAGGGGATAGCATTGGGAAGATATACCTAATGCTAAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACCAATATGTAACTAACTCACAATGTGCCATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATAACA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2786:HG2_PB_PB10Xdip_22407:HG2_PB_pbsv_4525:HG3_PB_pbsv_4426:HG2_PB_SVrefine2PB10Xhap12_3300:HG2_PB_HySA_8506:HG3_PB_HySA_6945:HG2_PB_SVrefine2Falcon2Bionano_2173;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_4426;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0941029;ClusterMaxSizeDiff=0.093985;ClusterMaxEditDist=0.165759;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=833;DistBack=-1;DistForward=5845;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=4:59622452-59622451;PctSeqSimilarity=0.9527;PctSizeSimilarity=0.9508;PctRecOverlap=0.952;SizeDiff=41;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=95;MatchId=4023.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:41:1|0:1:33:21:0:./.:0:0:0:0:0/1:29:13:0/1:31:25:.:.:.
chr4	60376073	HG2_Ill_150bpfermikitraw_5838	A	AAGATTTTTATTGTGAGATAAAAGCAAGAAATGTATATCATCTGGATATCACAGCTCTGATACAATTACTGTC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_5838:HG3_PB_pbsv_4430:HG4_PB_pbsv_4548:HG2_PB_PB10Xdip_22415:HG2_PB_PB10Xdip_22414:HG4_Ill_svaba_5866:HG4_Ill_manta_1111:HG4_Ill_Krunchall_6644:HG4_Ill_GATKHCSBGrefine_3184:HG4_Ill_Cortex_2643:HG4_Ill_250bpfermikitraw_6330:HG4_Ill_150bpfermikitraw_6048:HG3_Ill_svaba_5871:HG3_Ill_manta_1031:HG3_Ill_Spiral_4920:HG3_Ill_GATKHC_7551:HG3_Ill_GATKHCSBGrefine_3037:HG3_Ill_Cortex_2660:HG3_Ill_250bpfermikitraw_6088:HG3_Ill_150bpfermikitraw_5908:HG2_Ill_svaba_5752:HG2_Ill_manta_1263:HG2_Ill_SpiralSDKrefine_12272:HG2_Ill_GATKHC_7537:HG2_Ill_GATKHCSBGrefine_3046:HG2_Ill_Cortex_6261:HG2_Ill_250bpfermikitraw_6285;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5838:HG4_Ill_svaba_5866:HG4_Ill_manta_1111:HG4_Ill_Krunchall_6644:HG4_Ill_GATKHCSBGrefine_3184:HG4_Ill_Cortex_2643:HG4_Ill_250bpfermikitraw_6330:HG4_Ill_150bpfermikitraw_6048:HG3_Ill_svaba_5871:HG3_Ill_manta_1031:HG3_Ill_Spiral_4920:HG3_Ill_GATKHC_7551:HG3_Ill_GATKHCSBGrefine_3037:HG3_Ill_Cortex_2660:HG3_Ill_250bpfermikitraw_6088:HG3_Ill_150bpfermikitraw_5908:HG2_Ill_svaba_5752:HG2_Ill_manta_1263:HG2_Ill_SpiralSDKrefine_12272:HG2_Ill_GATKHC_7537:HG2_Ill_GATKHCSBGrefine_3046:HG2_Ill_Cortex_6261:HG2_Ill_250bpfermikitraw_6285;NumExactMatchSVs=23;ClusterMaxShiftDist=0.106667;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.167742;PBcalls=4;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=4:60376072-60376075;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4024.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:1/1:0:9:0:11:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr4	61825095	HG2_Ill_MetaSV_3569	T	TAAAATTTATATATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_4439:HG2_PB_pbsv_4541:HG2_PB_assemblyticsPBcR_18854:HG4_PB_pbsv_4560:HG2_PB_SVrefine2PBcRplusDovetail_8128:HG4_PB_HySA_6803:HG3_PB_HySA_6972:HG4_Ill_MetaSV_3743:HG3_Ill_MetaSV_3739:HG2_Ill_MetaSV_3569:HG4_PB_SVrefine2PBcRDovetail_2320:HG3_Ill_GATKHCSBGrefine_3040:HG2_Ill_GATKHCSBGrefine_3050:HG4_PB_SVrefine2Falcon1Dovetail_2776:HG3_PB_SVrefine2Falcon1Dovetail_2799:HG2_PB_SVrefine2Falcon1plusDovetail_8751:HG2_Ill_breakscan11_3442:HG2_PB_HySA_8536;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_MetaSV_3569:HG3_Ill_MetaSV_3739:HG4_Ill_MetaSV_3743;NumExactMatchSVs=3;ClusterMaxShiftDist=0.133739;ClusterMaxSizeDiff=0.133739;ClusterMaxEditDist=0.206304;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=6332;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=4:61825096-61825109;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4026.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:40:0|1:35:1:0:32:./.:0:0:0:0:0/1:25:9:0/1:7:41:.:.:.
chr4	62983289	HG2_PB_assemblyticsfalcon_19501	TAGAAAGTTATGTGG	GTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2778:HG3_PB_pbsv_4444:HG2_PB_pbsv_4546:HG2_PB_HySA_8554:HG3_PB_HySA_6987:HG2_PB_assemblyticsfalcon_19501:HG4_PB_assemblyticsfalcon_19071:HG2_Ill_breakscan11_3443:HG3_PB_SVrefine2Falcon1Dovetail_2801:HG2_PB_HySA_8553:HG2_PB_SVrefine2Falcon1plusDovetail_8755;NumClusterSVs=11;ExactMatchIDs=HG2_PB_assemblyticsfalcon_19501;NumExactMatchSVs=1;ClusterMaxShiftDist=0.14771;ClusterMaxSizeDiff=0.144756;ClusterMaxEditDist=0.20373;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=-15;DistForward=80645;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:62983304-62983288;PctSeqSimilarity=0.9681;PctSizeSimilarity=0.8986;PctRecOverlap=0.938;SizeDiff=-36;StartDistance=0;EndDistance=14;GTMatch=0;TruScore=93;MatchId=4027.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:45:51:./.:14:16:5:4:./.:0:0:0:0:./.:33:3:0/1:24:29:.:.:.
chr4	63195290	HG4_Ill_FB_4214	G	GCACCTCAGCCTCCTGAGCAATAGCAGCTGGCTGGGACTACAGGTATGTGC	20	PASS	ClusterIDs=HG3_PB_HySA_6990:HG3_PB_pbsv_4446:HG4_Ill_svaba_5893:HG4_Ill_scalpel_4343:HG4_Ill_SVrefine2DISCOVARDovetail_3469:HG4_Ill_Krunchall_6677:HG4_Ill_GATKHC_7656:HG4_Ill_GATKHCSBGrefine_3191:HG4_Ill_FB_4214:HG4_Ill_250bpfermikitraw_6364:HG4_Ill_150bpfermikitraw_6075:HG4_CG_vcfBeta_3010:HG3_PB_SVrefine2Falcon1Dovetail_2802:HG3_Ill_svaba_5902:HG3_Ill_scalpel_4524:HG3_Ill_Spiral_4947:HG3_Ill_SVrefine2DISCOVARDovetail_3483:HG3_Ill_Krunchall_6336:HG3_Ill_GATKHC_7587:HG3_Ill_GATKHCSBGrefine_3046:HG3_Ill_FB_4132:HG3_Ill_250bpfermikitraw_6120:HG3_Ill_150bpfermikitraw_5937:HG3_CG_vcfBeta_2597:HG2_Ill_svaba_5785:HG2_Ill_SpiralSDKrefine_12292:HG2_Ill_SVrefine2DISCOVARplusDovetail_9480:HG2_Ill_Krunchall_6438:HG2_Ill_GATKHC_7578:HG2_Ill_GATKHCSBGrefine_3052:HG2_Ill_FB_4132:HG2_Ill_250bpfermikitraw_6316:HG2_Ill_150bpfermikitraw_5870:HG2_CG_vcfBeta_2688:HG2_10X_SVrefine210Xhap12_3335:HG2_PB_HySA_8558:HG2_Ill_breakscan11_3444;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3335:HG2_CG_vcfBeta_2688:HG2_Ill_150bpfermikitraw_5870:HG2_Ill_250bpfermikitraw_6316:HG2_Ill_FB_4132:HG2_Ill_GATKHCSBGrefine_3052:HG2_Ill_GATKHC_7578:HG2_Ill_Krunchall_6438:HG2_Ill_SVrefine2DISCOVARplusDovetail_9480:HG2_Ill_SpiralSDKrefine_12292:HG2_Ill_svaba_5785:HG3_CG_vcfBeta_2597:HG3_Ill_150bpfermikitraw_5937:HG3_Ill_250bpfermikitraw_6120:HG3_Ill_FB_4132:HG3_Ill_GATKHCSBGrefine_3046:HG3_Ill_GATKHC_7587:HG3_Ill_Krunchall_6336:HG3_Ill_SVrefine2DISCOVARDovetail_3483:HG3_Ill_Spiral_4947:HG3_Ill_scalpel_4524:HG3_Ill_svaba_5902:HG3_PB_SVrefine2Falcon1Dovetail_2802:HG4_CG_vcfBeta_3010:HG4_Ill_150bpfermikitraw_6075:HG4_Ill_250bpfermikitraw_6364:HG4_Ill_FB_4214:HG4_Ill_GATKHCSBGrefine_3191:HG4_Ill_GATKHC_7656:HG4_Ill_Krunchall_6677:HG4_Ill_SVrefine2DISCOVARDovetail_3469:HG4_Ill_scalpel_4343:HG4_Ill_svaba_5893;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0961538;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.150943;PBcalls=4;Illcalls=29;TenXcalls=1;CGcalls=3;PBexactcalls=1;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=3;HG2count=13;HG3count=14;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=50;DistBack=4385;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=4:63195291-63195294;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4028.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:22:0|1:15:2:3:15:./.:0:0:0:0:0/1:21:30:./.:.:.:.:.:.
chr4	63927786	HG2_Ill_SpiralSDKrefine_12296	C	CCAGCAGCAGCAACCTGCTCGGGTCGCCTTCCATGCTGTGGAAGCTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTGCTACTCACTCTTTGGGTCTGCACTACCTTTATGAGCTGTAACACTCACCATGAAGGTCTACAGCTTCCCTCCTGAAGCCAGTGAGACTACAAACTCACTGGGAGGAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_22468:HG4_PB_pbsv_4569:HG4_PB_HySA_6819:HG3_PB_pbsv_4447:HG2_PB_pbsv_4550:HG4_PB_assemblyticsfalcon_19078:HG2_PB_assemblyticsfalcon_19513:HG2_PB_assemblyticsPBcR_18870:HG3_PB_HySA_6995:HG2_PB_HySA_8563:HG4_PB_SVrefine2Falcon1Dovetail_2779:HG4_PB_SVrefine2PBcRDovetail_2325:HG4_Ill_SVrefine2DISCOVARDovetail_3474:HG4_Ill_MetaSV_3747:HG4_Ill_GATKHCSBGrefine_3194:HG3_PB_SVrefine2Falcon1Dovetail_2803:HG3_Ill_Spiral_4952:HG3_Ill_SVrefine2DISCOVARDovetail_3487:HG3_Ill_MetaSV_3742:HG3_Ill_GATKHCSBGrefine_3048:HG3_Ill_250bpfermikitraw_6129:HG2_PB_SVrefine2PBcRplusDovetail_8133:HG2_PB_SVrefine2PB10Xhap12_3313:HG2_PB_SVrefine2Falcon2Bionano_2183:HG2_PB_SVrefine2Falcon1plusDovetail_8758:HG2_Ill_SpiralSDKrefine_12296:HG2_Ill_SVrefine2DISCOVARplusDovetail_9482:HG2_Ill_MetaSV_3573:HG2_Ill_GATKHCSBGrefine_3055:HG2_Ill_250bpfermikitraw_6326:HG2_Ill_150bpfermikitraw_5880:HG2_10X_SVrefine210Xhap12_3337:HG2_PB_PB10Xdip_22469;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3337:HG2_Ill_150bpfermikitraw_5880:HG2_Ill_250bpfermikitraw_6326:HG2_Ill_GATKHCSBGrefine_3055:HG2_Ill_MetaSV_3573:HG2_Ill_SVrefine2DISCOVARplusDovetail_9482:HG2_Ill_SpiralSDKrefine_12296:HG2_PB_SVrefine2Falcon1plusDovetail_8758:HG2_PB_SVrefine2Falcon2Bionano_2183:HG2_PB_SVrefine2PB10Xhap12_3313:HG2_PB_SVrefine2PBcRplusDovetail_8133:HG3_Ill_250bpfermikitraw_6129:HG3_Ill_GATKHCSBGrefine_3048:HG3_Ill_MetaSV_3742:HG3_Ill_SVrefine2DISCOVARDovetail_3487:HG3_Ill_Spiral_4952:HG3_PB_SVrefine2Falcon1Dovetail_2803:HG4_Ill_GATKHCSBGrefine_3194:HG4_Ill_MetaSV_3747;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.0529101;ClusterMaxEditDist=0.189974;PBcalls=18;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=185;DistBack=61523;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:63927787-63927788;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4030.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:1/1:0:39:0:13:./.:0:0:0:0:1/1:0:30:./.:.:.:.:.:.
chr4	65216746	HG2_Ill_GATKHCSBGrefine_3063	G	GGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_7017:HG4_Ill_MetaSV_3753:HG2_PB_SVrefine2PB10Xhap12_3319:HG2_PB_SVrefine2Falcon1plusDovetail_8764:HG3_PB_SVrefine2Falcon1Dovetail_2812:HG4_PB_SVrefine2Falcon1Dovetail_2786:HG3_PB_pbsv_4460:HG4_Ill_GATKHCSBGrefine_3208:HG3_Ill_MetaSV_3749:HG3_Ill_GATKHCSBGrefine_3056:HG2_PB_assemblyticsfalcon_19531:HG2_PB_assemblyticsPBcR_18890:HG2_PB_SVrefine2PBcRplusDovetail_8140:HG2_PB_SVrefine2Falcon2Bionano_2187:HG2_Ill_MetaSV_3576:HG2_Ill_GATKHCSBGrefine_3063:HG2_10X_SVrefine210Xhap12_3342:HG4_PB_assemblyticsfalcon_19095:HG4_PB_SVrefine2PBcRDovetail_2330:HG2_PB_pbsv_4559:HG2_PB_PB10Xdip_22487:HG2_PB_PB10Xdip_22486:HG3_PB_HySA_7018:HG2_PB_HySA_8584:HG4_PB_pbsv_4581:HG4_PB_HySA_6836;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3342:HG2_Ill_GATKHCSBGrefine_3063:HG2_Ill_MetaSV_3576:HG2_PB_SVrefine2Falcon2Bionano_2187:HG2_PB_SVrefine2PBcRplusDovetail_8140:HG2_PB_assemblyticsPBcR_18890:HG2_PB_assemblyticsfalcon_19531:HG3_Ill_GATKHCSBGrefine_3056:HG3_Ill_MetaSV_3749:HG4_Ill_GATKHCSBGrefine_3208:HG4_Ill_MetaSV_3753;NumExactMatchSVs=11;ClusterMaxShiftDist=0.130809;ClusterMaxSizeDiff=0.120482;ClusterMaxEditDist=0.268503;PBcalls=19;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=291;DistBack=831;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=4:65216747-65216746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4031.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:67:./.:0:1:0:0:./.:0:0:0:0:1/1:0:14:./.:.:.:.:.:.
chr4	65855612	HG4_Ill_Krunchall_6716	T	TGTATATATACAATATATAGTTGTGTATATATATATATACACACAACTATATATATATATATATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_4586:HG3_Ill_GATKHC_7620:HG3_Ill_manta_1036:HG4_PB_assemblyticsfalcon_19101:HG3_PB_assemblyticsfalcon_19481:HG3_Ill_Spiral_4970:HG2_Ill_manta_1272:HG2_Ill_SpiralSDKrefine_12310:HG3_Ill_GATKHCSBGrefine_3057:HG2_Ill_GATKHC_7616:HG2_Ill_GATKHCSBGrefine_3069:HG4_Ill_GATKHC_7691:HG4_Ill_GATKHCSBGrefine_3217:HG3_PB_HySA_7027:HG4_PB_HySA_6846:HG3_Ill_150bpfermikitraw_5959:HG2_Ill_Krunchall_6471:HG2_Ill_250bpfermikitraw_6350:HG2_Ill_150bpfermikitraw_5899:HG4_Ill_svaba_5928:HG4_Ill_Krunchall_6716:HG4_Ill_250bpfermikitraw_6404:HG4_Ill_150bpfermikitraw_6111:HG3_Ill_svaba_5925:HG2_Ill_svaba_5818:HG2_PB_pbsv_4562:HG2_PB_HySA_8591;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_svaba_5818:HG3_Ill_svaba_5925:HG4_Ill_150bpfermikitraw_6111:HG4_Ill_250bpfermikitraw_6404:HG4_Ill_Krunchall_6716:HG4_Ill_svaba_5928;NumExactMatchSVs=6;ClusterMaxShiftDist=0.179104;ClusterMaxSizeDiff=0.179104;ClusterMaxEditDist=0.3125;PBcalls=7;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=0;DistForward=3;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:65855611-65855613;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9851;PctRecOverlap=0.9851;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=98;MatchId=4032.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:35:0|1:28:2:0:32:./.:0:0:0:0:0/1:23:22:./.:.:.:.:.:.
chr4	66104448	HG2_PB_HySA_8594	T	TTATTATACACACATATATACATATATGTGTATATATACACACATATATACATATATGTGTATATACACACATATATACATATA	20	PASS	ClusterIDs=HG2_PB_HySA_8594:HG2_PB_pbsv_4563:HG4_Ill_250bpfermikitraw_6406:HG4_PB_pbsv_4587;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_8594;NumExactMatchSVs=1;ClusterMaxShiftDist=0.102857;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.201117;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=83;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=4:66104449-66104561;PctSeqSimilarity=0.9818;PctSizeSimilarity=0.9639;PctRecOverlap=0.9759;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4033.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:22:./.:22:13:1:0:./.:0:0:0:0:1/1:0:56:./.:.:.:.:.:.
chr4	66413930	HG2_PB_PB10Xdip_22499	T	TAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAGAAACATCAGATAAGAAAATGAGAAAATTACATAGACATTTCATCAAAAAGGATATACAGATGACAAATAAGCACATAAAAATATTTTCACATCAGTAGCCATTAAGGAAATGAAAAATTAACACCACACTGAGATATCTCTATACACGTATCAGAATGCCTAAAATAAAAAACTGTGACAACACCTATCTGGGTGTGGTGGCTCACGCCTCTAATCCCAGCACTTTGGGAAGCCAAGGCAGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGGCAACATAGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGTCAGGTGTGGTGATTCATGCCTGTAGTCACAGCTACTCAGAAGGCTGAGGTATAAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAGTGGGCAAAGATCATGCCACTATACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAATAGTGAAAACACCAAATGCTGGCAATGTTATGAAGGAACTAGATCAAGGTTATGAAGAAACCTTCAAGGTTATGAAGAAACCGGATCACTCATACATTGTTGGTGAGAATATAAAATGAGTACAAGCCACTCTGGAATACAGTTCCTCTAAAAACTAAACGTACAACTACCTTGTGACCCAGCAATTGCATTACCAGGCATTTATCCCAGAGAAATGAAGAGCTGTGTTCACACAAGAATCCATATATGACTGTTTATAGCAGCTTTATTTGTTATAACCCGGAACTGAAAACAACCTAGATGTCCTTCAATGAGTGAATAGCGAAACAACTTTCAAATATTCATACCATGGAATACTACTCAGCAATAATATTGATACATACAACAACTTCGATGAATTTCAAAAAAAAAATGAACTGAGTAAAAAAAAAAAAGCCAATCTCAAAAGATTGCACATTAACCTTTTATAAAACATTCTTGAAAGGACAAAATTATAGTAATGGAGAACAGATCAATTGTTGCCACGTATTAAGGAGGGAGGAGAGAAGGGAAGTGGGTGTGGCTAAAAAAAGGCAGCAGGAAGGATCGTTGTAGTGATGGAAATGTACTGTATCTTGACTGTGTCAATGTCAGTATCTTGGTTGCGATATTATACTCTAGTTTTGCAAGATGTTACTATTGGAGGAAACTGAGTAAAAAGTGCATGGACCGCTCAGTATTAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8768:HG4_PB_pbsv_4590:HG2_PB_pbsv_4565:HG4_PB_HySA_6852:HG4_PB_SVrefine2PBcRDovetail_2333:HG2_PB_HySA_8597:HG3_PB_pbsv_4466:HG2_PB_PB10Xdip_22500:HG2_PB_PB10Xdip_22499:HG2_10X_SVrefine210Xhap12_3347:HG2_PB_SVrefine2Falcon2Bionano_2190:HG2_PB_SVrefine2PB10Xhap12_3324:HG3_PB_SVrefine2PBcRDovetail_2070:HG2_PB_SVrefine2PBcRplusDovetail_8143:HG3_PB_SVrefine2Falcon1Dovetail_2816:HG4_PB_SVrefine2Falcon1Dovetail_2789;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_22499:HG2_PB_PB10Xdip_22500;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0490838;ClusterMaxSizeDiff=0.0471204;ClusterMaxEditDist=0.192021;PBcalls=15;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1497;DistBack=18794;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:66413931-66413932;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.996;PctRecOverlap=0.996;SizeDiff=6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4034.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:158:./.:0:0:0:0:./.:0:0:0:0:1/1:0:16:./.:15:227:.:1401:.
chr4	66440349	HG2_Ill_150bpfermikitraw_5907	T	TATATATATACATATATATATATATACATATATATATATACACATATATATATACATATATATATATACAC	20	PASS	ClusterIDs=HG4_PB_pbsv_4591:HG4_Ill_GATKHC_7695:HG4_Ill_250bpfermikitraw_6410:HG4_Ill_150bpfermikitraw_6117:HG2_Ill_GATKHC_7621:HG2_Ill_150bpfermikitraw_5907;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5907:HG2_Ill_GATKHC_7621:HG4_Ill_150bpfermikitraw_6117:HG4_Ill_250bpfermikitraw_6410:HG4_Ill_GATKHC_7695;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0547945;ClusterMaxSizeDiff=0.0547945;ClusterMaxEditDist=0.109589;PBcalls=1;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=-1;DistForward=91;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=11;REFWIDENED=4:66440348-66440361;PctSeqSimilarity=0.9221;PctSizeSimilarity=0.8537;PctRecOverlap=0.8554;SizeDiff=-12;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=87;MatchId=4035.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:28:./.:21:13:2:3:./.:0:0:0:0:0/1:27:23:./.:.:.:.:.:.
chr4	66469801	HG4_Ill_GATKHCSBGrefine_3219	T	TAAAAATGTTACCTCATTTCTGTTTCAAATATTTGTTTTATGATAATCTTCCAATAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3445:HG3_PB_pbsv_4467:HG2_PB_pbsv_4567:HG2_PB_PB10Xdip_22502:HG4_PB_pbsv_4592:HG2_PB_PB10Xdip_22501:HG2_PB_HySA_8598:HG4_PB_assemblyticsfalcon_19105:HG4_Ill_svaba_5933:HG4_Ill_scalpel_4367:HG4_Ill_manta_1125:HG4_Ill_Krunchall_6722:HG4_Ill_GATKHC_7696:HG4_Ill_GATKHCSBGrefine_3219:HG4_Ill_Cortex_2652:HG4_Ill_250bpfermikitraw_6412:HG4_Ill_150bpfermikitraw_6119:HG3_PB_assemblyticsfalcon_19484:HG3_Ill_svaba_5931:HG3_Ill_manta_1040:HG3_Ill_Spiral_4974:HG3_Ill_Krunchall_6369:HG3_Ill_GATKHC_7626:HG3_Ill_GATKHCSBGrefine_3060:HG3_Ill_Cortex_2668:HG3_Ill_250bpfermikitraw_6155:HG3_Ill_150bpfermikitraw_5965:HG2_PB_assemblyticsfalcon_19543:HG2_PB_assemblyticsPBcR_18904:HG2_Ill_svaba_5823:HG2_Ill_scalpel_4452:HG2_Ill_manta_1274:HG2_Ill_SpiralSDKrefine_12314:HG2_Ill_Krunchall_6479:HG2_Ill_GATKHC_7622:HG2_Ill_GATKHCSBGrefine_3072:HG2_Ill_Cortex_6290:HG2_Ill_250bpfermikitraw_6359:HG2_Ill_150bpfermikitraw_5908;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5908:HG2_Ill_250bpfermikitraw_6359:HG2_Ill_Cortex_6290:HG2_Ill_GATKHCSBGrefine_3072:HG2_Ill_GATKHC_7622:HG2_Ill_Krunchall_6479:HG2_Ill_SpiralSDKrefine_12314:HG2_Ill_manta_1274:HG2_Ill_scalpel_4452:HG2_Ill_svaba_5823:HG2_PB_assemblyticsPBcR_18904:HG2_PB_assemblyticsfalcon_19543:HG3_Ill_150bpfermikitraw_5965:HG3_Ill_250bpfermikitraw_6155:HG3_Ill_Cortex_2668:HG3_Ill_GATKHCSBGrefine_3060:HG3_Ill_GATKHC_7626:HG3_Ill_Krunchall_6369:HG3_Ill_Spiral_4974:HG3_Ill_manta_1040:HG3_Ill_svaba_5931:HG3_PB_assemblyticsfalcon_19484:HG4_Ill_150bpfermikitraw_6119:HG4_Ill_250bpfermikitraw_6412:HG4_Ill_Cortex_2652:HG4_Ill_GATKHCSBGrefine_3219:HG4_Ill_GATKHC_7696:HG4_Ill_Krunchall_6722:HG4_Ill_manta_1125:HG4_Ill_scalpel_4367:HG4_Ill_svaba_5933:HG4_PB_assemblyticsfalcon_19105;NumExactMatchSVs=32;ClusterMaxShiftDist=0.12069;ClusterMaxSizeDiff=0.101695;ClusterMaxEditDist=0.273504;PBcalls=10;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=28;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=29339;DistForward=5327;DistMin=5327;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=4:66469802-66469805;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4036.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:./.:0:1:0:0:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr4	67106598	HG2_10X_SVrefine210Xhap12_3349	T	TAGAAAGATTAAGATTTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_22503:HG3_PB_assemblyticsfalcon_19489:HG4_PB_assemblyticsfalcon_19111:HG3_PB_pbsv_4470:HG4_PB_HySA_6858:HG2_PB_HySA_8605:HG4_PB_pbsv_4597:HG2_PB_pbsv_4569:HG2_PB_assemblyticsPBcR_18910:HG2_PB_assemblyticsfalcon_19550:HG2_PB_HySA_8604:HG3_PB_HySA_7042:HG4_PB_SVrefine2PBcRDovetail_2338:HG4_Ill_MetaSV_3758:HG4_Ill_GATKHCSBGrefine_3223:HG3_PB_SVrefine2PBcRDovetail_2072:HG3_PB_SVrefine2Falcon1Dovetail_2820:HG3_Ill_MetaSV_3752:HG3_Ill_GATKHCSBGrefine_3063:HG2_PB_SVrefine2PBcRplusDovetail_8145:HG2_PB_SVrefine2PB10Xhap12_3326:HG2_Ill_GATKHCSBGrefine_3074:HG2_10X_SVrefine210Xhap12_3349:HG2_PB_SVrefine2Falcon2Bionano_2192:HG2_PB_SVrefine2Falcon1plusDovetail_8770:HG4_PB_SVrefine2Falcon1Dovetail_2794:HG2_Ill_MetaSV_3579:HG2_PB_PB10Xdip_22504;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3349:HG2_Ill_GATKHCSBGrefine_3074:HG2_PB_SVrefine2PB10Xhap12_3326:HG2_PB_SVrefine2PBcRplusDovetail_8145:HG3_Ill_GATKHCSBGrefine_3063:HG3_Ill_MetaSV_3752:HG3_PB_SVrefine2Falcon1Dovetail_2820:HG3_PB_SVrefine2PBcRDovetail_2072:HG4_Ill_GATKHCSBGrefine_3223:HG4_Ill_MetaSV_3758:HG4_PB_SVrefine2PBcRDovetail_2338;NumExactMatchSVs=11;ClusterMaxShiftDist=0.151659;ClusterMaxSizeDiff=0.151659;ClusterMaxEditDist=0.274322;PBcalls=21;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=318;DistBack=12598;DistForward=10224;DistMin=10224;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=4:67106599-67106616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4037.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:84:1/1:1:31:0:31:./.:0:0:0:0:1/1:0:26:1/1:3:90:1383:.:.
chr4	67963878	HG2_PB_SVrefine2PBcRplusDovetail_8148	T	TTCCTTACAACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTTGGCTCACTGCTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_22509:HG2_PB_HySA_8610:HG3_PB_pbsv_4471:HG2_PB_HySA_8609:HG4_PB_pbsv_4602:HG4_PB_assemblyticsfalcon_19117:HG3_PB_assemblyticsfalcon_19495:HG2_PB_assemblyticsPBcR_18914:HG2_PB_assemblyticsfalcon_19552:HG2_10X_SVrefine210Xhap12_3352:HG4_PB_SVrefine2PBcRDovetail_2341:HG2_PB_SVrefine2Falcon2Bionano_2193:HG4_PB_SVrefine2Falcon1Dovetail_2798:HG2_PB_SVrefine2Falcon1plusDovetail_8773:HG2_PB_pbsv_4572:HG3_Ill_SVrefine2DISCOVARDovetail_3512:HG2_PB_SVrefine2PB10Xhap12_3330:HG3_PB_SVrefine2Falcon1Dovetail_2824:HG3_PB_SVrefine2PBcRDovetail_2073:HG2_PB_SVrefine2PBcRplusDovetail_8148:HG3_PB_HySA_7047:HG4_PB_HySA_6863:HG2_PB_HySA_8608:HG2_PB_PB10Xdip_22510;NumClusterSVs=24;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_8148:HG3_PB_SVrefine2PBcRDovetail_2073;NumExactMatchSVs=2;ClusterMaxShiftDist=0.179289;ClusterMaxSizeDiff=0.179289;ClusterMaxEditDist=0.262561;PBcalls=22;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=316;DistBack=84773;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=4:67963879-67963892;PctSeqSimilarity=0.986;PctSizeSimilarity=0.9753;PctRecOverlap=0.9754;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4038.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:1:24:0:19:./.:0:0:0:0:1/1:0:17:1/1:2:52:.:.:.
chr4	68944769	HG3_PB_HySA_7058	T	TAAAAAAATGGCGGGCCGGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAGAATACAAAAAATTAGCCGGGCGCGCGTGGCGGGCGCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_HySA_7058:HG2_PB_pbsv_4576:HG3_PB_pbsv_4475:HG3_PB_assemblyticsfalcon_19504:HG4_PB_assemblyticsfalcon_19123:HG2_PB_assemblyticsfalcon_19559:HG3_PB_SVrefine2PBcRDovetail_2074:HG3_PB_SVrefine2Falcon1Dovetail_2825:HG4_PB_SVrefine2Falcon1Dovetail_2799:HG2_PB_SVrefine2Falcon2Bionano_2194:HG2_PB_SVrefine2Falcon1plusDovetail_8774:HG2_PB_HySA_8621;NumClusterSVs=12;ExactMatchIDs=HG3_PB_HySA_7058;NumExactMatchSVs=1;ClusterMaxShiftDist=0.10104;ClusterMaxSizeDiff=0.10104;ClusterMaxEditDist=0.166667;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=336;DistBack=6826;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=4:68944770-68944779;PctSeqSimilarity=0.994;PctSizeSimilarity=0.994;PctRecOverlap=0.9941;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4039.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:41:0|1:33:5:1:21:./.:0:0:0:0:0/1:31:8:0/1:8:27:.:.:.
chr4	69127148	HG3_Ill_250bpfermikitraw_6181	C	CACTATGGTTAAAAGTCAGCTTAATTAAAAGTGGATAGATCCCTCTCAAAATGTAATG	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_19563:HG3_Ill_GATKHC_7648:HG3_Ill_GATKHCSBGrefine_3066:HG2_Ill_GATKHC_7647:HG2_Ill_GATKHCSBGrefine_3080:HG3_PB_pbsv_4477:HG2_PB_HySA_8624:HG2_PB_pbsv_4578:HG2_Ill_breakscan11_3446:HG3_Ill_manta_1043:HG3_Ill_Spiral_4997:HG2_Ill_manta_1278:HG2_Ill_SpiralSDKrefine_12330:HG3_Ill_svaba_5955:HG3_Ill_Krunchall_6396:HG3_Ill_250bpfermikitraw_6181:HG3_Ill_150bpfermikitraw_5989:HG2_Ill_svaba_5846:HG2_Ill_Krunchall_6504:HG2_Ill_250bpfermikitraw_6384:HG2_Ill_150bpfermikitraw_5935;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5935:HG2_Ill_250bpfermikitraw_6384:HG2_Ill_Krunchall_6504:HG2_Ill_svaba_5846:HG3_Ill_150bpfermikitraw_5989:HG3_Ill_250bpfermikitraw_6181:HG3_Ill_Krunchall_6396:HG3_Ill_svaba_5955;NumExactMatchSVs=8;ClusterMaxShiftDist=0.102564;ClusterMaxSizeDiff=0.0854701;ClusterMaxEditDist=0.188034;PBcalls=4;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=0;DistForward=13859;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:69127147-69127149;PctSeqSimilarity=0.9831;PctSizeSimilarity=1;PctRecOverlap=0.9825;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=4040.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:36:0|1:36:8:4:25:./.:0:0:0:0:0/1:40:29:./.:.:.:.:.:.
chr4	69141008	HG2_Ill_SVrefine2DISCOVARplusDovetail_9497	T	TTTTTTTTTTTTGAGATGGAGTCTCACTTTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGACTCAGCCTCCTGAGTAGCTGGGATTACAGGCACATGCCACCATGCCCACTTAATTTTTTGTTATTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAAGATCATCTCGATCTCCTGACCACCCTCGATCATGTCTCAATCCACCTGCCTCGACCTCCCAATATTTTATTTTTTGTAGAGACAGGGTCTCACTATGTTGCCCAAGCTGGTCTGAAACTCCCGGCCTCAAGCGATTCTCCTGCCTCAGCCTCTCAAAAGGCTAGGATTGGCCAGGCGCGCTGGCTCATGCCTTAATCCTAGCACTTTGGGAGGCCAAGGCGGGCGGATCACGAGGGCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTTAAAAAAACAAACAAAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGCATCTGTAGTCCCAGCCACTCGGGAGGCTGAAGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCGAAAAAAAAAAAAAAAAAAGAGCTAGGATTGCAGGTGTGAGCCATCACACCCACCCATACACTATTTCTTTTTCTTTCTTTC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2802:HG2_PB_pbsv_4579:HG3_PB_pbsv_4478:HG2_PB_HySA_8626:HG4_PB_HySA_6871:HG2_PB_PB10Xdip_22545:HG2_PB_PB10Xdip_22544:HG3_Ill_MetaSV_3754:HG3_Ill_GATKHCSBGrefine_3067:HG4_Ill_MetaSV_3763:HG2_Ill_GATKHCSBGrefine_3081:HG4_Ill_GATKHCSBGrefine_3228:HG4_PB_pbsv_4608:HG2_PB_HySA_8625:HG3_PB_HySA_7062:HG2_PB_SVrefine2Falcon1plusDovetail_8777:HG4_Ill_SVrefine2DISCOVARDovetail_3492:HG2_PB_SVrefine2PB10Xhap12_3334:HG2_PB_SVrefine2Falcon2Bionano_2197:HG2_Ill_SVrefine2DISCOVARplusDovetail_9497:HG2_PB_SVrefine2PBcRplusDovetail_8153:HG2_10X_SVrefine210Xhap12_3354:HG3_PB_SVrefine2PBcRDovetail_2077:HG4_PB_SVrefine2PBcRDovetail_2344;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9497:HG2_PB_SVrefine2Falcon2Bionano_2197:HG2_PB_SVrefine2PB10Xhap12_3334:HG4_Ill_SVrefine2DISCOVARDovetail_3492;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0535948;ClusterMaxSizeDiff=0.0522876;ClusterMaxEditDist=0.180529;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=750;DistBack=13859;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=228;REFWIDENED=4:69141009-69141236;PctSeqSimilarity=0.9864;PctSizeSimilarity=0.9973;PctRecOverlap=0.8695;SizeDiff=2;StartDistance=-97;EndDistance=-97;GTMatch=0;TruScore=95;MatchId=4041.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:83:1/1:0:36:0:21:./.:0:0:0:0:1/1:0:8:1/1:6:152:.:.:.
chr4	70413667	HG2_Ill_breakscan11_3447	C	AATTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2807:HG2_PB_HySA_8643:HG2_PB_pbsv_4586:HG4_PB_pbsv_4617:HG2_PB_SVrefine2Falcon1plusDovetail_8782:HG4_PB_HySA_6879:HG2_Ill_breakscan11_3447:HG4_PB_SVrefine2PBcRDovetail_2351;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_breakscan11_3447;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0983607;ClusterMaxEditDist=0.264706;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=8744;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:70413668-70413666;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4042.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:38:0|1:41:4:0:26:./.:0:0:0:0:0/1:34:7:0/1:5:21:.:.:.
chr4	70477005	HG3_PB_SVrefine2Falcon1Dovetail_2831	GT	TTCCAGCTATTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCGCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3771:HG4_PB_pbsv_4619:HG2_PB_pbsv_4588:HG2_PB_HySA_8645:HG4_Ill_GATKHCSBGrefine_3242:HG4_PB_SVrefine2Falcon1Dovetail_2809:HG4_Ill_SVrefine2DISCOVARDovetail_3502:HG4_PB_SVrefine2PBcRDovetail_2353:HG2_PB_SVrefine2PBcRplusDovetail_8159:HG2_PB_SVrefine2PB10Xhap12_3340:HG4_PB_HySA_6880:HG3_PB_SVrefine2Falcon1Dovetail_2831:HG2_PB_PB10Xdip_22556:HG2_Ill_MetaSV_3589;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2831;NumExactMatchSVs=1;ClusterMaxShiftDist=0.190317;ClusterMaxSizeDiff=0.183639;ClusterMaxEditDist=0.260434;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=311;DistBack=-2;DistForward=-1;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:70477007-70477004;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.9968;PctRecOverlap=0.9968;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4043.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:36:0|1:36:1:2:26:./.:0:0:0:0:0/1:27:9:0/1:5:20:5012:.:.
chr4	70874791	HG2_Ill_Krunchall_6520	A	ATATTTGGTCAAGACAAAGCAAAGAGTAAGAAATGGGTAGTTATGAATACTTAATCAATCACTCAGGAATATGTCTGGAAAGAAGCCAGAATAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9507:HG4_PB_HySA_6881:HG2_PB_HySA_8646:HG4_PB_pbsv_4621:HG2_PB_pbsv_4590:HG4_Ill_GATKHC_7736:HG4_Ill_GATKHCSBGrefine_3243:HG4_Ill_250bpfermikitraw_6449:HG2_Ill_Krunchall_6520:HG2_Ill_GATKHC_7671:HG2_Ill_GATKHCSBGrefine_3087:HG4_PB_SVrefine2PBcRDovetail_2354:HG2_PB_SVrefine2PBcRplusDovetail_8160:HG2_PB_SVrefine2Falcon2Bionano_2204;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3087:HG2_Ill_GATKHC_7671:HG2_Ill_Krunchall_6520:HG4_Ill_250bpfermikitraw_6449:HG4_Ill_GATKHCSBGrefine_3243:HG4_Ill_GATKHC_7736;NumExactMatchSVs=6;ClusterMaxShiftDist=0.120879;ClusterMaxSizeDiff=0.10989;ClusterMaxEditDist=0.157895;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=93;DistBack=-81;DistForward=33603;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=99;REFWIDENED=4:70874774-70874872;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4044.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:87:./.:32:18:1:30:./.:0:0:0:0:0/1:16:23:./.:.:.:.:.:.
chr4	70958641	HG3_PB_SVrefine2PBcRDovetail_2080	C	CAGGTCACTGTGAACACCATTAATTCATTCCTTTTTATGGCTGAGTAGTATTCCAGTGTGTGTGTATATATATATATACACATACACAATAGAATATATATCAATATATAGAGATATAGATATAGATATAGATAGATATAGATATAGATACACACATACACACACACACCAGTTTCTTTATCCACTCCTTGATTGATGGACATTTGGGTTTGTTCCACATTTTTGCATTTGCGAATTGTCCTGCTATAAACATGCGTGTGCAAGTACGTTTTTGTATAATGACTTATTTTCCTCTAGGTAGATACCCAGTAGTGGGATTGCTGGATTGAATGGTAGTTCTATTTTTAGTTCTTTATGAAATCTCCGGCCTGGCGCAGTGGCTCATGCCTGTAATCTCAGCACTTTGGGAGGCCGAGGCGGGCAGATTATGAGGTCAGGAGATCAAGCCCATCCTGGCTAATATGGTGAAACCCCATCTCTACTAAAAGTACAAAAAATTAGCTGGGCGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAAGTGGGAGAATAGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAATAAATAAATAAATAAAAGAAAAAAAGAAAGAAATCTCCACACTGTTTCTCATAGTGGTTGTACTAGTTTACATTCCCGCCAACAGTGTAGAAGTGTTCCCTGTTCACTGCATCCATGCCAACATCTATTATTTTTGGATTTTTTTATTATGGCCATTCTTGCAGGAGTAAGGTGATATCACATTGCAGTTTTGATTTGCATTTCCCTGACCATTAGTAATGTTGAGGACTTTTTCCTACGTTTGTTGGCCATTTGTGTATTTTCTTTTGAGAATTGTCTATTCATGTCCTTAGCCTTTTTTTAAAAAATTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACAATGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTTTGCTGCACCCATTAACTCGTCATTTAGCTTTAGGTATATCTCCTAAGGCTATCCCTCCCCCCTCCCCCCACCCCACAACAGTCCCGGAAGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTCATGTCCTTTGTAGGGACATGGATGAGACTGGAAACCATCATTCTCAGCAAACTATCACAAGGACAAAAGCCTACTTTTTGATGGGATTGTTTTTTGTTTTTTTTTTTTCTTTCTGGTTTGTTTGAGTTCGTTGTAGATTCTGGATATTAGTGCTTTGTGCTTTGTCAGATGTATGGATTGTGAAGATTTTCTCCTACTATATGGGATGTCTGTTTACTCTGCTGAATCTTCCTTTTGCGGTGCAAAAGCTCTTTAGTTTAATTAATTCCCGCCTATTTATCTTTGTTTTTATTGCATTTGCTTTTGGGTTATTGGTCATAAATGGTTTGCCTAAGCCATTATCTAGAAGGGTTTTTCCAATGTCATCTTCTAGAATTTTTATAGTTTCACGTCTTAGATGTAAGTACATCTAAAGTTGATTTTTTTTTATAAGATGAGAGATGAGGATCCAGTTTCATTCTCCTACATGTGCCACAGAGATCTTTCAAAAAATCTTATTTTAAAATTATATATGTTGTCTAAAACTCATCTAAGACTCTCCTTGTCTTCTGTAATGAGGGCTTAATTTTTTTTAACTTGTGTGTATTTTATAATCAGAGGGTACATGTGCAGGTTTGTTACAAAGCTATATTGCATGATGCTGAAGTTTAGAGTACAAATGAATTCATCACCCAGGTAGTGAGCATAGTATCCAATAAAAAGCTTTTCAGTCCTTGCACCCCCCCCATCTTCTATTCTCTAGTGTCTGTTGTTCCCATTTTTGTGTCCATGTGTAACTAATGTTTAGCTCCCATTTGTAAGTGAGAATTTGTGATATTTGTTTTTCTGTTTCTGTGTTAATTTGCTTAGGATAATGGATTTCAGCTTCATCCATGTTGCTACAAAGAACATGATTTTATTCTTTTTTATGGCTGCATAGTATTTCATTTTATATATACAAATTTATATTTTCATGTTTTATATCTTTGCTATTGTGAATAGTACTGTGATGAACATACAGGTGCATGTGTCTTTTTGTAGAATGATTTATTTTCTTTTTGGCATATACCCAGTAATGGGATTGCTGGGTCCAATGGTAGTTCAACTCTTAGTTCCTTGAGAAGTCGCCAAAATGTTCTCCGTAGTGATTGAACTAATTTACATTCCCACCACCAGCAGTGTATGTGTCTCCTTTTCTCCACAGCCTCACCAACATCTGGTATTTTTTTACTTCTTAGTAAAAGTCACTCTACCTAGTATGGGATGGTTTCTCGTTGTTTTGGTCTACATTTCTCTGATTATTAGGGATGATGAGCATTTTGTCGTATGTTTGTTGGCTGCTTGTATCAGCCTTGGCAAAGAATTTGTGGCTAAGTCCTCAAAATCAATTGCAACAAGATAAAAATTAACAAGTGAGACCTAATTAAACTAAAGAGAATCTGTACAGCAAGAGAAACTATAAAGGGAGTAAACAGACAACCTACAGAATGGGAGAAAATATTTACAAACTATGCATCCAATAAAGGAATAATATCTAGAACCTATGACGAACTTTAAAAAAATCAACAAACAAAAAACAAATAACCCCATCAAAAATCGGTTAGAGCACATGAACAGACACTTCTCAAAAGAAGTTCTTAAATCTTTAGCATCACACAGAAAGCTCTGAAGAGTCTATCCTGTTGACCCCTGTACTCCCAGCTCTTGACTTCTTTACTGGCATCGATTCCTATGGCACACTGAGCTTTGCACCCTTTCAAAATCTTAGGTTTCTTTATTATTTTTGGGGCTTCCAAGCCCCCAACAGCTTTCTTTTCTCTACTCCCTTATCTCTGTAACTCTACTGAAGCTGTAGGATCCAATTTAATATATATCCCTTTCTTTAAAAAAATATTGGTTTTGGTTGCAAATTGACAAATTTGACAAATTCTATATATTTATGGGGTACAAAGTGATGTTATAATTTATAAATAAAATGTGTAATAATTAATGAAGCTCATTAACATATACATGACCTCAAATACCATCTTTTGAGATGAGAATTTTGAAATTTATTTTGAAATGTACAGTAAATTATTTATTGTAGTAGTAATTGTATCTAACTAGTTATAGCAGAGAGCTAAAGCTGATTGAAAACTTCAGAGCCAAGCCATTGTTAACGAAGTGATCTTAATCACTGATTAGAGAAATCAATTAAGAATCATTACACTAAAACGTTCATTATTAGAGCACAAACTCTGTGTTAACAATGATAACAATGACACACTACTAAAGATATGTGTTACTATAATTCCCCTCTTTTCTCAGGCTAAGTAATTTTTGGTTATTACAGTATTTTATAAGTATCTCTATAAGAGCACTTTTGGGATGTATTCATTTGTATCAACTCTATTGGACAATAATCTTTTTGAAGTCAGAGAAATAGCCTTTTTTCTTTGAGAATCTAGTACATAACACAGGGCTTTAGTACATAGGATAGTCATCATGTTTGACAAATAAATGAAATAAAGAGTTACTGTTTCATCATATATTCTTTATCAGGACTCAAACAATTTCTAATCTTTATCTTTATTATTGCCCTGTTGTTGCAATGTCTGTAAGTATATGAAAAAACTGAAAAAATAAATTCTTACTGGTTTCCTGAATAGTCTCTAATACTTTATGTGCTCTGAATGTTAATAGATTTGCATTTATCTATACAATGTGTGTTAAATTATACTACTTTTATGTAAATATTTTCTTCAAATTATATTACAAAATGTTCATAAGGCAATAGGATTTCACCTATATCTACTCATCTATAATAATTTTTGAAGTTTTATTACATTAATTGAACATATAAAAATGATGCCATGTCAGTTTCCTATTATGGAAATATGTGGAAGAAAAACATTAGAAATAACTTGTTATAGAAATAACTCCAACATGGTATTATAAGTTTCCATCTGAAAGCTGCTAGAACAAAAACTCCTAAGTCTTTTGTGTATTTTAAATACATGAAAACTATATGCACTTTAGTCATTCATAATATAGATTTAGTGCAGGGACCAATGCTGATTCTGAAAATAAGGTCAATAGCAAGAGAAGAGGGTATGTTTAGAAAATATAACTTTCATGTATTTATAATACATGACAGGTTTTTAACCAATTAAGCAGGATTTTTAGATATTAAATTTTTATTACAAGAGGATATAACTGAATAGATAGAACTCGAAAACATCAAAACATAAAGTTATTCAGAAAAGTTTAACACATAGTTTACTTTCAAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2833:HG3_PB_pbsv_4484:HG2_PB_pbsv_4591:HG4_PB_SVrefine2PBcRDovetail_2355:HG4_PB_pbsv_4623:HG2_Ill_SVrefine2DISCOVARplusDovetail_9508:HG2_PB_SVrefine2PB10Xhap12_3342:HG2_PB_SVrefine2PBcRplusDovetail_8161:HG2_PB_SVrefine2Falcon2Bionano_2205:HG2_10X_SVrefine210Xhap12_3363:HG4_Ill_SVrefine2DISCOVARDovetail_3504:HG3_PB_SVrefine2PBcRDovetail_2080:HG3_Ill_SVrefine2DISCOVARDovetail_3521:HG2_PB_SVrefine2Falcon1plusDovetail_8784:HG2_PB_PB10Xdip_22558:HG2_PB_PB10Xdip_22559:HG2_Ill_breakscan11_3448:HG4_PB_SVrefine2Falcon1Dovetail_2811;NumClusterSVs=18;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_3521:HG3_PB_SVrefine2PBcRDovetail_2080:HG4_Ill_SVrefine2DISCOVARDovetail_3504;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0461285;ClusterMaxSizeDiff=0.0459088;ClusterMaxEditDist=0.234609;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=4456;DistBack=758;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:70958642-70958643;PctSeqSimilarity=0.9981;PctSizeSimilarity=0.9991;PctRecOverlap=0.9991;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4045.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:133:1/1:1:40:0:35:./.:0:0:0:0:1/1:0:31:1/1:0:689:.:4427:.
chr4	71093300	HG4_Ill_GATKHCSBGrefine_3244	T	TAAAAAGCTTTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_6886:HG2_PB_pbsv_4592:HG2_PB_HySA_8652:HG2_PB_PB10Xdip_22560:HG2_PB_SVrefine2PBcRplusDovetail_8162:HG4_PB_SVrefine2Falcon1Dovetail_2812:HG4_Ill_MetaSV_3772:HG4_Ill_GATKHCSBGrefine_3244:HG2_Ill_MetaSV_3590:HG2_Ill_GATKHCSBGrefine_3088:HG4_Ill_manta_1138:HG2_PB_SVrefine2Falcon1plusDovetail_8785:HG2_PB_SVrefine2PB10Xhap12_3343:HG2_Ill_breakscan11_3449:HG4_PB_pbsv_4624;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3088:HG2_Ill_MetaSV_3590:HG4_Ill_GATKHCSBGrefine_3244:HG4_Ill_MetaSV_3772;NumExactMatchSVs=4;ClusterMaxShiftDist=0.17256;ClusterMaxSizeDiff=0.166902;ClusterMaxEditDist=0.21398;PBcalls=9;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=364;DistBack=10180;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=4:71093301-71093312;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4046.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:48:0|1:38:0:0:39:./.:0:0:0:0:0/1:30:10:0/1:12:54:.:.:.
chr4	71202404	HG2_PB_SVrefine2Falcon1plusDovetail_8787	G	GCAATTTTTTCATTAGTATTTCATCAGTGATTCTCTTCTATTTAAAAAATTTTTAATCCTCATATAAGAATTAAGACAATTCAGTAATTGTTTAGCACCCACATGTAAGATACATAAGATTTATGATAGGGTTCTTGGCACATGTTAGATACAAACTAAAGCAAAATGATATTTTACAAATATGCATATTTGTCAGAAAAATGTTCTGTAAACATATACAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8787:HG3_PB_pbsv_4485:HG2_PB_HySA_8654:HG2_PB_pbsv_4594:HG3_PB_HySA_7072:HG2_PB_SVrefine2PBcRplusDovetail_8164;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8787:HG2_PB_SVrefine2PBcRplusDovetail_8164;NumExactMatchSVs=2;ClusterMaxShiftDist=0.135135;ClusterMaxSizeDiff=0.135135;ClusterMaxEditDist=0.203024;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=220;DistBack=2328;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=226;REFWIDENED=4:71202405-71202630;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4047.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:30:./.:18:11:18:13:./.:0:0:0:0:0/1:5:18:./.:.:.:.:.:.
chr4	72714688	HG2_Ill_breakscan11_3450	T	GCAGGTCTACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3450:HG2_PB_pbsv_4602:HG2_PB_PB10Xdip_22579:HG2_PB_assemblyticsPBcR_18962:HG4_PB_HySA_6895:HG2_PB_HySA_8664:HG2_PB_SVrefine2PB10Xhap12_3354:HG2_PB_SVrefine2Falcon1plusDovetail_8793:HG2_PB_SVrefine2PBcRplusDovetail_8170:HG4_PB_pbsv_4632;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_breakscan11_3450;NumExactMatchSVs=1;ClusterMaxShiftDist=0.138439;ClusterMaxSizeDiff=0.138439;ClusterMaxEditDist=0.193452;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=338;DistBack=40077;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:72714689-72714687;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9971;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4049.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:44:1|0:5:29:22:6:./.:0:0:0:0:0/1:37:12:0/1:10:32:.:.:.
chr4	72719804	HG4_Ill_GATKHCSBGrefine_3252	A	AAATAATACTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2840:HG2_PB_pbsv_4603:HG3_PB_assemblyticsfalcon_19548:HG4_PB_pbsv_4633:HG2_Ill_breakscan11_3451:HG4_PB_HySA_6896:HG4_Ill_MetaSV_3777:HG4_Ill_GATKHCSBGrefine_3252:HG2_Ill_MetaSV_3593:HG2_Ill_GATKHCSBGrefine_3097:HG2_10X_SVrefine210Xhap12_3373:HG4_PB_SVrefine2Falcon1Dovetail_2818:HG2_PB_SVrefine2Falcon1plusDovetail_8794;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3373:HG2_Ill_GATKHCSBGrefine_3097:HG2_Ill_MetaSV_3593:HG4_Ill_GATKHCSBGrefine_3252:HG4_Ill_MetaSV_3777;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0851735;ClusterMaxSizeDiff=0.0694006;ClusterMaxEditDist=0.209375;PBcalls=7;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=310;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=4:72719805-72719816;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4050.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:35:1|0:1:27:34:1:./.:0:0:0:0:0/1:35:19:0/1:7:27:.:.:.
chr4	72729215	HG3_Ill_150bpfermikitraw_6012	G	GTTTTACCCATTAAAATGGATAAAAACGCTTGGAGCTCTGTGATTTCAATGGTGATTGTGCTTTGAATCTCTGTTGTTTGTCTTTGTATAGTCTGCAGATGTGGATCCTGACTCCTGTGAGAAGTAGCTCACTGTGACAAAGCTGCCT	20	PASS	ClusterIDs=HG2_PB_pbsv_4604:HG4_PB_pbsv_4634:HG4_PB_HySA_6898:HG2_PB_SVrefine2Falcon1plusDovetail_8795:HG4_Ill_svaba_5988:HG4_Ill_SVrefine2DISCOVARDovetail_3512:HG4_Ill_MetaSV_3778:HG3_PB_SVrefine2PBcRDovetail_2085:HG3_Ill_svaba_5977:HG3_Ill_manta_1048:HG3_Ill_Spiral_5017:HG3_Ill_SVrefine2DISCOVARDovetail_3529:HG3_Ill_MetaSV_3760:HG3_Ill_GATKHCSBGrefine_3077:HG3_Ill_250bpfermikitraw_6205:HG3_Ill_150bpfermikitraw_6012:HG2_PB_SVrefine2Falcon2Bionano_2211:HG2_Ill_svaba_5873:HG2_10X_SVrefine210Xhap12_3374:HG4_PB_SVrefine2PBcRDovetail_2361:HG3_PB_pbsv_4492:HG2_PB_SVrefine2PB10Xhap12_3355:HG2_PB_assemblyticsPBcR_18964:HG2_PB_SVrefine2PBcRplusDovetail_8172;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3374:HG2_Ill_svaba_5873:HG2_PB_SVrefine2Falcon2Bionano_2211:HG3_Ill_150bpfermikitraw_6012:HG3_Ill_250bpfermikitraw_6205:HG3_Ill_GATKHCSBGrefine_3077:HG3_Ill_MetaSV_3760:HG3_Ill_SVrefine2DISCOVARDovetail_3529:HG3_Ill_Spiral_5017:HG3_Ill_manta_1048:HG3_Ill_svaba_5977:HG3_PB_SVrefine2PBcRDovetail_2085:HG4_Ill_MetaSV_3778:HG4_Ill_SVrefine2DISCOVARDovetail_3512:HG4_Ill_svaba_5988;NumExactMatchSVs=15;ClusterMaxShiftDist=0.259928;ClusterMaxSizeDiff=0.258993;ClusterMaxEditDist=0.310469;PBcalls=11;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=147;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:72729216-72729217;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4051.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:56:0|1:37:2:0:50:./.:0:0:0:0:0/1:26:14:./.:.:.:.:.:.
chr4	72970711	HG2_PB_SVrefine2Falcon2Bionano_2215	T	TAAAAATGTAGGAAGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3452:HG3_PB_pbsv_4495:HG2_PB_pbsv_4607:HG3_PB_HySA_7091:HG3_PB_assemblyticsfalcon_19556:HG2_PB_HySA_8675:HG3_Ill_MetaSV_3763:HG4_PB_SVrefine2Falcon1Dovetail_2824:HG2_PB_SVrefine2Falcon2Bionano_2215:HG2_Ill_MetaSV_3596:HG2_Ill_GATKHCSBGrefine_3102:HG3_PB_SVrefine2Falcon1Dovetail_2844;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3102:HG2_Ill_MetaSV_3596:HG2_PB_SVrefine2Falcon2Bionano_2215:HG4_PB_SVrefine2Falcon1Dovetail_2824;NumExactMatchSVs=4;ClusterMaxShiftDist=0.13522;ClusterMaxSizeDiff=0.13522;ClusterMaxEditDist=0.201258;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=321;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:72970712-72970727;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4052.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:52:1|0:7:24:21:6:./.:0:0:0:0:0/1:32:9:0/1:8:28:.:.:.
chr4	73395753	HG3_Ill_GATKHC_7694	A	AATATATTATATTTATATATAATATGTTATATATTATATTTATATATAATATGTT	20	PASS	ClusterIDs=HG3_Ill_GATKHC_7694:HG2_PB_HySA_8686:HG4_Ill_GATKHC_7765:HG3_PB_HySA_7104;NumClusterSVs=4;ExactMatchIDs=HG3_Ill_GATKHC_7694;NumExactMatchSVs=1;ClusterMaxShiftDist=0.121739;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.26087;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=-28;DistForward=35;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=33;REFWIDENED=4:73395752-73395787;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4053.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:68:1/1:4:27:0:5:./.:0:0:0:0:./.:1:0:./.:.:.:.:.:.
chr4	73889663	HG3_PB_SVrefine2PBcRDovetail_2093	C	CAGAAAAGGAGTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_7109:HG2_PB_pbsv_4611:HG3_PB_pbsv_4501:HG4_PB_pbsv_4646:HG3_PB_assemblyticsfalcon_19564:HG2_PB_assemblyticsPBcR_18973:HG2_Ill_breakscan11_3453:HG3_PB_SVrefine2Falcon1Dovetail_2847:HG3_Ill_MetaSV_3764:HG2_PB_SVrefine2PBcRplusDovetail_8179:HG2_PB_SVrefine2PB10Xhap12_3362:HG2_PB_SVrefine2Falcon2Bionano_2217:HG3_PB_SVrefine2PBcRDovetail_2093:HG2_PB_SVrefine2Falcon1plusDovetail_8802:HG4_PB_SVrefine2Falcon1Dovetail_2828:HG2_PB_PB10Xdip_22593:HG2_PB_PB10Xdip_22592:HG2_PB_HySA_8687;NumClusterSVs=18;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_2093;NumExactMatchSVs=1;ClusterMaxShiftDist=0.138929;ClusterMaxSizeDiff=0.138929;ClusterMaxEditDist=0.189152;PBcalls=16;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=343;DistBack=8807;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=4:73889664-73889677;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9971;PctRecOverlap=0.9942;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4054.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:1/1:0:18:0:12:./.:0:0:0:0:1/1:0:19:1/1:2:75:.:.:.
chr4	76090148	HG4_PB_SVrefine2Falcon1Dovetail_2834	A	ACAGTAGAATGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTTACGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2834:HG3_PB_assemblyticsfalcon_19577:HG2_PB_pbsv_4620:HG3_PB_pbsv_4508:HG2_PB_SVrefine2Falcon2Bionano_2220:HG3_PB_SVrefine2Falcon1Dovetail_2854:HG2_PB_HySA_8707;NumClusterSVs=7;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_2834;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0417288;ClusterMaxSizeDiff=0.0387481;ClusterMaxEditDist=0.146628;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=337;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=4:76090149-76090165;PctSeqSimilarity=0.9941;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4056.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:43:1|0:1:34:27:4:./.:0:0:0:0:0/1:24:5:0/1:9:31:.:.:.
chr4	76589056	HG3_Ill_manta_1055	T	TAAAAAAAAAGAATATAATCCCCAGAACAGTCAAAATTACAACATTAGAAATTGGAGATTAGGAGGAGAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3455:HG3_PB_pbsv_4513:HG3_PB_HySA_7127:HG2_PB_pbsv_4623:HG3_PB_SVrefine2Falcon1Dovetail_2856:HG4_Ill_svaba_6027:HG4_Ill_manta_1146:HG4_Ill_SVrefine2DISCOVARDovetail_3529:HG4_Ill_Krunchall_6825:HG4_Ill_GATKHC_7795:HG4_Ill_GATKHCSBGrefine_3270:HG4_Ill_250bpfermikitraw_6505:HG4_Ill_150bpfermikitraw_6207:HG3_PB_SVrefine2PBcRDovetail_2099:HG3_Ill_svaba_6022:HG3_Ill_manta_1055:HG3_Ill_Spiral_5052:HG3_Ill_SVrefine2DISCOVARDovetail_3549:HG3_Ill_Krunchall_6456:HG3_Ill_GATKHC_7731:HG3_Ill_GATKHCSBGrefine_3095:HG3_Ill_250bpfermikitraw_6246:HG3_Ill_150bpfermikitraw_6056:HG2_PB_SVrefine2Falcon1plusDovetail_8810:HG2_Ill_svaba_5907:HG2_Ill_manta_1292:HG2_Ill_Krunchall_6569:HG2_Ill_GATKHC_7723:HG2_Ill_GATKHCSBGrefine_3112:HG2_Ill_250bpfermikitraw_6449:HG2_Ill_150bpfermikitraw_5993:HG4_PB_pbsv_4655:HG2_PB_PB10Xdip_22601;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5993:HG2_Ill_250bpfermikitraw_6449:HG2_Ill_GATKHCSBGrefine_3112:HG2_Ill_GATKHC_7723:HG2_Ill_Krunchall_6569:HG2_Ill_manta_1292:HG2_Ill_svaba_5907:HG2_PB_SVrefine2Falcon1plusDovetail_8810:HG3_Ill_150bpfermikitraw_6056:HG3_Ill_250bpfermikitraw_6246:HG3_Ill_GATKHCSBGrefine_3095:HG3_Ill_GATKHC_7731:HG3_Ill_Krunchall_6456:HG3_Ill_SVrefine2DISCOVARDovetail_3549:HG3_Ill_Spiral_5052:HG3_Ill_manta_1055:HG3_Ill_svaba_6022:HG3_PB_SVrefine2PBcRDovetail_2099:HG4_Ill_150bpfermikitraw_6207:HG4_Ill_250bpfermikitraw_6505:HG4_Ill_GATKHCSBGrefine_3270:HG4_Ill_GATKHC_7795:HG4_Ill_Krunchall_6825:HG4_Ill_SVrefine2DISCOVARDovetail_3529:HG4_Ill_manta_1146:HG4_Ill_svaba_6027;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0863309;ClusterMaxSizeDiff=0.070922;ClusterMaxEditDist=0.171429;PBcalls=8;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=13;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=20576;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=4:76589057-76589061;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4057.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:1:27:1:17:./.:0:0:0:0:1/1:1:49:./.:.:.:.:.:.
chr4	76625598	HG2_PB_SVrefine2PBcRplusDovetail_8186	A	AATTTCTTTCTTTCTTTTTTTTTTTGAGACGAAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTACAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCCACCATGCCTAGCTAATTTTTTGTATTTTTTAACAGCGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTAACCTCGTGATCCGCCCGCCTCAGCCTCCTAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACTCAGCCTAACATAATTTCTTTTATCTTCTGTAAAGTAGAAATAATACTAGCACTTCATTGGATTGTTGTCAGAATTAAGTTAGATAATGTATGGAAGGCATATAGTATATTAAATGGCAAATAACTGACCTGTAAGCAGTTACAACAGATTATCTCCTCAACACTTTATTTTTTAAATTCAGCCCTTTCCAGCTCAGGTCAAAGTTCTCTAACCTGGCACTGCTCTTCTACAAACTTTTGTTATTCTTTCAATTTCTAGATTCAAATTAGATTAGTTATTCTGTCAACCCAACAGATACCAGTGAAATTTATTCCCATGTCCTCTCTCTCACAAAGATGAATGTTGCTGAATTATTTTGTGGGTACTGAATGTCTCTCTTATGGGCCTAAATATTTTCTCCAGTTTCAGTTGCAATTTGCCAACTCTAATCTTTCAGGAGTTAGGGCTGCTCTGCTTACACCACTGGTTTTTAACCTTTCTCTTTTGATAGCTACAGCATCAGTTTTTGTTCACTTCTCCCTTGGGGTACTTTGGTAGCAAGGTTTCCATATTTTTAACACAGTACTTAGTTTCCCTGTCCATCTTTGACATATCACAGAATCAGGTTTAACATAAAACTTCCAAATACAATAGCGCCTGGTACAAGAAATATTTGTTGAATGAATGAGACC	20	PASS	ClusterIDs=HG3_Ill_Spiral_5053:HG2_PB_pbsv_4624:HG2_Ill_MetaSV_3599:HG4_PB_pbsv_4656:HG4_Ill_GATKHCSBGrefine_3272:HG2_PB_HySA_8711:HG2_PB_PB10Xdip_22602:HG3_PB_pbsv_4514:HG4_Ill_MetaSV_3782:HG3_Ill_MetaSV_3769:HG3_Ill_GATKHCSBGrefine_3096:HG4_Ill_GATKHCSBGrefine_3271:HG3_PB_HySA_7128:HG4_PB_SVrefine2Falcon1Dovetail_2835:HG2_PB_SVrefine2Falcon1plusDovetail_8811:HG3_PB_SVrefine2PBcRDovetail_2100:HG3_Ill_SVrefine2DISCOVARDovetail_3550:HG4_PB_SVrefine2PBcRDovetail_2373:HG4_Ill_SVrefine2DISCOVARDovetail_3530:HG2_PB_SVrefine2PBcRplusDovetail_8186:HG2_PB_SVrefine2PB10Xhap12_3370:HG2_Ill_SVrefine2DISCOVARplusDovetail_9534:HG2_10X_SVrefine210Xhap12_3390:HG3_PB_SVrefine2Falcon1Dovetail_2857:HG2_PB_SVrefine2Falcon2Bionano_2221;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3390:HG2_Ill_SVrefine2DISCOVARplusDovetail_9534:HG2_PB_SVrefine2PB10Xhap12_3370:HG2_PB_SVrefine2PBcRplusDovetail_8186:HG4_Ill_SVrefine2DISCOVARDovetail_3530:HG4_PB_SVrefine2PBcRDovetail_2373;NumExactMatchSVs=6;ClusterMaxShiftDist=0.061;ClusterMaxSizeDiff=0.06;ClusterMaxEditDist=0.238559;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=972;DistBack=36538;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=303;REFWIDENED=4:76625599-76625901;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9979;PctRecOverlap=0.9385;SizeDiff=-2;StartDistance=-59;EndDistance=-59;GTMatch=0;TruScore=97;MatchId=4058.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:26:1:16:./.:0:0:0:0:1/1:0:18:0/1:20:161:.:1039:.
chr4	76674935	HG4_Ill_SVrefine2DISCOVARDovetail_3531	C	CTTTTTTTTTTTTTTCTCCCGAGACGGAGTCTTGCACTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAAGCTCCGCCTCTAGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACCCGTCACCAGGCCCAGCTAATTTTTATTGCATTTTTAGTAGAGACAGGGTTTCATCATGTTAGCCAGCATGGTCTCGATCTCCTGACCTCGTGATCCACCCACCTCAGCCTCCCAAAGTGCTAGGATTATAGGCGTGAGCCACCACGCCCGGCCTAAACTATGTTCTTCATCAGATGTTTTCCAAATATTTTCACCCAGTCTGTGGTTTACCTTTTCAGTCTCTTCATAGTGTCTTTCGAACAGCAGAAGTGGGGTTGGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAACGTGGGAGAATCACTTGAGCCCAGGAGTTTGAGAGCAGACTGAGCAATATAGTTAGACCCTGTCTCTAAAAATTACAAGAAAATTAGCCAGATGTAGTTGTGGTTGTGTGCCTGTGGGCCCAGCTACTCGAGAGGCTGAGGTGGGAGGATTGCTTGAGGACAGGAGGTTGTGGCTACAGGGAGCCATGATTGCACCACTGCACTTCAACCTAGGAGATAGAGCAAGACCCCGTCTAAAAAAAAAAGTGATGAAATCTAATTTATTACATTTTTCTTTTTTTAATTTTTATTTATTTATTTTTGAGACAGGGTCTCGCTCTGTCAACAGGCTGGAGTGTAGTGGTGCGATCTTAGCTCGCTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGATTCCCGAGTAGCTGGGGACTATAGGTGCGCACCACCTCACCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCCCAAAGTGCTGAGATTACAGGTGTGAGCCACCGTGCCCATTCTACATTTTTCTTTTATGAATGTGGCATCTGAGAAGTCTTCGCCTAAACAGAGGTCACGAGGATTTTCTCGTATGCTTTCTTCTAGAAGTTTTACAGTTTTAGGTTTCCAAATTATTTTTTAATGTAATTTTATATGCACAGTCTGATACTTTTGCTTTACTGAATCCGTAGTTTAAATTTAGTTTTATAACTTGCTTTTTTTCATCTCATTATTATACCATGGTATTTTCATATCAGTAGTTAATTCTTTTGAATACCTACATGGCGTTCCATCAAAGAATGTATTACAATTGTTTAGCTTTCTTCTCATATTGGATAGTTAAGTTGTTATCTGTTTTTTCCTATTATTAATAATGTTCCAAGATTTGTTTTAAAATTCAGTTGAAAGTTTGGTTTCTATAAATTATTTTATTTTATTTTATTTTATTTTTATTTATTTATTTATTTGAAACGGAACCTCACTCTGTCACTCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCCGCCTGCCAGGTTCAAGCAATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGACACGTGCCACCATGCCCGGCTAATTTTAGTATTTTTAGTAGAGACAGGGTTTCACCATATTGGCCAAGCTCATCTAGAGCTCCTGACTTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGAGCCCGGCCAAGATTCGTTTTAAAATTCAGTTTAAATTTTGGTTTTGGCCGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTGAAGTCAGGAGCTCTAGATGAGCTTGGCCAATATGGTGAAACCCTGTCTCTACTAAAAATACTAAAATTAGCCAGGCATGGTGGCAGGTGCCTGTAATCCCATCTTTTCAGGGGGGCCGAGGCAGTAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCGCATTGTCGCACTCCAGCCTGGGGGACAAGAGCGAGACTTCGTCTCAAAAAAAAAAATTTTTTTTTTGGTTTCTATAAATTATTTTATAATGAAGCGTTTCATCCTTGTATATTTTGAGGCACACTTAAAAGTTTTGATATAAAGTTTTGACTTCTTCTTGTTCAGATATATGATGAAAATGTTAGGAAAAAGATGATGTAAACAATTACTATTTTAAAAATTTTAAATAACTTTCTGTCTTCTATCATAACCATATTGGATTATGCTCCCCTCCTGGTTCAAACAGTCATAATAGGCCTAATTAGAAAGCTCTGATTTTACCAATTATTTCTTTTAATTCCTCAATTTATATGATTTATTTTGACTTCTCTTTCAGCCCCTCCCACTTTTTAAGTCTCTGCAAAACTATTTGATCTCTGTAATGAGATTATAATACTACCTAAATGCATAGTTAGATTTCTGAAAGACCATTTCTGTTACATCCCATGTGCTGATTTTTTTTTTAATTACATGGCATAAATTTAGGGGACAAAAATTTCACGGTTTTTTTTATTCTTTTAATGCCATTTTATTTTTTCATGACAGATTCAAAAGCTTTGTGACAGAGTAGCTTCATCTACTTTATTGGATGATCGAAGAAATGCTGTTCGTGCTCTCAAATCATTATCTAAGGTTTGTAACTTTGTAAATGTTTTAAGTTTCTTAAGTTGGATATTAGTTACTTTAGTAACATTTTTATTTTTTATGTGCAGAAATACCGCTTGGAAGTGGGTATACAAGCTATGGAACATCTTATTCATGTTTTACAAACAGATCGGTAAGTCTCTGTTTAATGATTTTTTTCCCTAATTTTTCTTGAACTTTTGTTTTAGAGTCAGCATCACTATTCCAAAAGATTGCTTTTTTTTTGGTATTTTTTGGTAGAGATGGGGTTTGCCATGTTGCCCACGCTGGTCTCGAACTCCTGGGCTCAGGCGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTGCAGGTGTGAGCCACTGCGCCTGGCCCTAAAAGTTGTTGACATACTAAAGCTGTTAAGTTTTTACTTCAGATGTCATTTCGATAAAGATTTATTGGACAGAGTGCGAGCCACTGTGTTAAGCATAAAACAGACATATAAAAATGGGATAAAGCAACTCTTTAATGCCTTGAGATTTTGAGTTTGAATTGGGCAAGTGGTATTCATTTACACTGGGCAAGTAGATATTCATTTACATATAATATACATATTTTGGTATTCAGACTTGCTTTTTTAAGAGAAATAAACTGCAGTAATAAGAGTTAAGTGTTAAATATGAGCCTGTCATAAGAGAAAGATTGCCAGATATGGTGGCTCAAGCTTGTAATTCCAGCACCTTGGAAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTCGATACTAGCCTGGGCAACATAAAAAATAAAAATTAGGCCAGGCATGGTGTCTCATGCCTGTAATCCCAGCACTTTGGGAAGCCGAGGCAGGTGGATTACTTGAGGTCAGGAGTTCGAGACCAGCCTGGTCAAATGGTGAAACCCGGTCTCTACTAAAAATAACAAAAATTAGCCAGGCCTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGTCTGAGGCGGGAGAAATCACTTGAACCCAGGAGATGGAGATTACAGTTAACCAAGATCGTCCAACTGCACTTCAGCCTGGGCAACAGAGCAAGACTCTGTCTCAAAAAAACAAAAAAGATAAATAATAAAATAAAAATTAGCTGGGTGTGTTGTCACATACCTGTGGTCCCAGCTTCTCGGGAGGCTGAGGTGGGAGGATCACTCGAGCCCAGGAAGTCAAGGCTGCAGTGAGCCGTGATCATACCACTGTATTCCAACCTGGGCAGCAGAGTGAGACCTTGTCTTGACAAAATAAATATAAATTTAAAGAAAAAGAAGCATCATTTAGCCCATTTTTAGCTCTTTCAATT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2858:HG3_PB_pbsv_4515:HG2_PB_PB10Xdip_22603:HG3_PB_assemblyticsfalcon_19588:HG2_PB_SVrefine2Falcon2Bionano_2222:HG4_PB_SVrefine2PBcRDovetail_2374:HG2_PB_SVrefine2Falcon1plusDovetail_8812:HG4_PB_SVrefine2Falcon1Dovetail_2836:HG2_PB_SVrefine2PBcRplusDovetail_8187:HG3_Ill_SVrefine2DISCOVARDovetail_3552:HG3_PB_SVrefine2PBcRDovetail_2101:HG2_PB_SVrefine2PB10Xhap12_3371:HG4_Ill_SVrefine2DISCOVARDovetail_3531:HG2_Ill_SVrefine2DISCOVARplusDovetail_9535;NumClusterSVs=14;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_3531;NumExactMatchSVs=1;ClusterMaxShiftDist=0.215926;ClusterMaxSizeDiff=0.215926;ClusterMaxEditDist=0.263355;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=4002;DistBack=10233;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=304;REFWIDENED=4:76674936-76675239;PctSeqSimilarity=0.9976;PctSizeSimilarity=0.9995;PctRecOverlap=0.975;SizeDiff=-2;StartDistance=-99;EndDistance=-99;GTMatch=0;TruScore=99;MatchId=4059.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:97:1/1:1:34:0:15:./.:0:0:0:0:1/1:0:12:1/1:3:524:.:.:.
chr4	76940679	HG4_Ill_GATKHCSBGrefine_3274	C	CCACTGCACTCCAGCCTGGGCAACAGAGCGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAGCAATGCTGCTATCACATTATTATTATTATTATTATTTTTGAGACAGAATCTTGCTCTGTCGCCCAGGCAGGAGTGCAGTGGCGCAATCTCGGCT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_22604:HG3_PB_pbsv_4519:HG2_PB_pbsv_4627:HG2_PB_HySA_8715:HG4_PB_pbsv_4659:HG4_PB_SVrefine2PBcRDovetail_2377:HG2_10X_SVrefine210Xhap12_3392:HG4_PB_SVrefine2Falcon1Dovetail_2838:HG4_Ill_MetaSV_3784:HG4_Ill_GATKHCSBGrefine_3274:HG2_PB_SVrefine2Falcon2Bionano_2224:HG2_Ill_GATKHCSBGrefine_3114:HG4_Ill_SVrefine2DISCOVARDovetail_3533:HG2_PB_SVrefine2Falcon1plusDovetail_8814:HG3_Ill_manta_1056:HG3_Ill_MetaSV_3770:HG3_Ill_GATKHCSBGrefine_3098:HG2_PB_SVrefine2PBcRplusDovetail_8189:HG3_PB_SVrefine2PBcRDovetail_2103:HG3_Ill_SVrefine2DISCOVARDovetail_3556:HG2_PB_SVrefine2PB10Xhap12_3373:HG2_Ill_SVrefine2DISCOVARplusDovetail_9537:HG3_PB_SVrefine2Falcon1Dovetail_2861:HG4_PB_HySA_6941:HG2_Ill_breakscan11_3456;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3114:HG2_PB_SVrefine2Falcon2Bionano_2224:HG4_Ill_GATKHCSBGrefine_3274:HG4_Ill_MetaSV_3784:HG4_PB_SVrefine2Falcon1Dovetail_2838:HG4_PB_SVrefine2PBcRDovetail_2377;NumExactMatchSVs=6;ClusterMaxShiftDist=0.135048;ClusterMaxSizeDiff=0.122186;ClusterMaxEditDist=0.292683;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=156;DistBack=34747;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=4:76940680-76940686;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9811;PctRecOverlap=0.9874;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4060.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:4:34:0:20:./.:0:0:0:0:1/1:1:25:./.:.:.:.:.:.
chr4	76993809	HG4_Ill_MetaSV_3786	T	TAAAACCTGTGATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAACGAGACTCCGTCTCAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2863:HG2_PB_SVrefine2Falcon1plusDovetail_8816:HG2_PB_pbsv_4629:HG4_PB_HySA_6944:HG4_PB_pbsv_4661:HG4_Ill_manta_1147:HG4_Ill_MetaSV_3786:HG4_Ill_GATKHCSBGrefine_3277:HG2_PB_SVrefine2Falcon2Bionano_2226:HG2_Ill_MetaSV_3601:HG2_Ill_GATKHCSBGrefine_3116;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3116:HG2_Ill_MetaSV_3601:HG2_PB_SVrefine2Falcon2Bionano_2226:HG4_Ill_GATKHCSBGrefine_3277:HG4_Ill_MetaSV_3786:HG4_Ill_manta_1147;NumExactMatchSVs=6;ClusterMaxShiftDist=0.139605;ClusterMaxSizeDiff=0.130501;ClusterMaxEditDist=0.29742;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=315;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=302;REFWIDENED=4:76993810-76984012;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4061.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:38:0|1:26:0:2:29:./.:0:0:0:0:0/1:18:11:0/1:6:40:.:.:.
chr4	77348383	HG2_Ill_GATKHCSBGrefine_3117	T	TAAAAATAAAAATTTAAGGTTTTGCAGACGCCACCGCCGAGGAAAACCGTGTACTATTAGCCATGGTCAACCCCACCGTGTTCTTCGACATTGCCGTCGACGGCGAGCCCTTGGGCCGCGTCTCCTTTGAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGAAAATTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGGGAGAAATTTGAAGATGAGAACTTCATCCTAAAGCATACGGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGGATGGCAAGCATGTGGTGTTTGGCAAAGTGAAAGAAGGCATGAATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGACTGTGGACAACTCGAATAAGTTTGACTTGTGTTTTATCTTAACCACCAGATCATTCCTTCTGTAGCTCAGGAGAGCACCCCTCCACCCCATTTGCTCGCAGTATCCTAGAATCTTTGTGCTCTCGCTGCAGTTCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTCCCATGCCTAGCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACAATTGTCAAAAAAAAAAAAAAAATAAA	20	PASS	ClusterIDs=HG2_PB_HySA_8718:HG3_PB_pbsv_4520:HG2_PB_PB10Xdip_22606:HG2_PB_pbsv_4630:HG3_PB_assemblyticsfalcon_19597:HG4_PB_SVrefine2Falcon1Dovetail_2840:HG2_PB_SVrefine2PB10Xhap12_3375:HG2_PB_SVrefine2Falcon1plusDovetail_8817:HG3_Ill_MetaSV_3771:HG3_Ill_GATKHCSBGrefine_3099:HG2_Ill_MetaSV_3602:HG2_Ill_GATKHCSBGrefine_3117:HG3_PB_SVrefine2PBcRDovetail_2104:HG2_Ill_breakscan11_3457:HG3_PB_HySA_7130;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3117:HG2_Ill_MetaSV_3602:HG3_Ill_GATKHCSBGrefine_3099:HG3_Ill_MetaSV_3771;NumExactMatchSVs=4;ClusterMaxShiftDist=0.130192;ClusterMaxSizeDiff=0.130192;ClusterMaxEditDist=0.227273;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=790;DistBack=107748;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:77348384-77348399;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4062.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:44:1|0:2:27:18:5:./.:0:0:0:0:0/1:23:19:0/1:14:60:.:.:.
chr4	77798847	HG2_Ill_150bpfermikitraw_6002	G	GTATATATATATATATATATATATATATATATACATATATATATATATATATATACATA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6002:HG3_Ill_GATKHC_7739:HG3_Ill_GATKHCSBGrefine_3100:HG2_PB_HySA_8722:HG2_PB_pbsv_4631:HG3_PB_pbsv_4522:HG3_PB_assemblyticsfalcon_19601:HG3_Ill_Spiral_5060:HG2_Ill_manta_1293:HG4_PB_pbsv_4663:HG4_Ill_GATKHCSBGrefine_3278:HG3_Ill_150bpfermikitraw_6062:HG2_PB_HySA_8721:HG2_Ill_GATKHC_7732:HG2_Ill_GATKHCSBGrefine_3118;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6002:HG4_Ill_GATKHCSBGrefine_3278:HG2_Ill_GATKHC_7732:HG2_Ill_GATKHCSBGrefine_3118;NumExactMatchSVs=4;ClusterMaxShiftDist=0.245614;ClusterMaxSizeDiff=0.245614;ClusterMaxEditDist=0.285714;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=-1;DistForward=6;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=4:77798848-77798886;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4063.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:38:1|0:3:33:35:3:./.:0:0:0:0:0/1:27:12:./.:.:.:.:.:.
chr4	79159505	HG2_Ill_GATKHCSBGrefine_3119	T	TTAAAAAAGCTAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTCGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAAATAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_6954:HG2_PB_pbsv_4635:HG4_PB_SVrefine2Falcon1Dovetail_2842:HG3_PB_pbsv_4528:HG3_PB_assemblyticsfalcon_19605:HG3_PB_SVrefine2Falcon1Dovetail_2865:HG4_PB_pbsv_4667:HG2_Ill_MetaSV_3603:HG2_PB_SVrefine2PB10Xhap12_3377:HG2_PB_PB10Xdip_22637:HG2_PB_assemblyticsPBcR_19011:HG2_PB_SVrefine2PBcRplusDovetail_8192:HG3_Ill_GATKHCSBGrefine_3103:HG3_Ill_MetaSV_3774:HG4_PB_SVrefine2PBcRDovetail_2379:HG4_Ill_manta_1148:HG4_Ill_MetaSV_3787:HG4_Ill_GATKHCSBGrefine_3279:HG2_PB_SVrefine2Falcon2Bionano_2228:HG2_Ill_GATKHCSBGrefine_3119;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3119:HG2_PB_SVrefine2Falcon2Bionano_2228:HG4_Ill_GATKHCSBGrefine_3279:HG4_Ill_MetaSV_3787:HG4_Ill_manta_1148;NumExactMatchSVs=5;ClusterMaxShiftDist=0.179811;ClusterMaxSizeDiff=0.176656;ClusterMaxEditDist=0.29652;PBcalls=13;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=76608;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=4:79159506-79159515;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4065.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:46:1|0:1:35:29:1:./.:0:0:0:0:0/1:28:10:0/1:11:24:.:.:.
chr4	79322966	HG2_10X_SVrefine210Xhap12_3397	T	TAAGAAACCTGAAGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_22638:HG2_PB_pbsv_4637:HG3_PB_pbsv_4530:HG3_PB_assemblyticsfalcon_19608:HG4_PB_pbsv_4671:HG4_PB_SVrefine2Falcon1Dovetail_2845:HG2_PB_assemblyticsPBcR_19013:HG3_PB_SVrefine2Falcon1Dovetail_2867:HG3_PB_SVrefine2PBcRDovetail_2107:HG3_Ill_MetaSV_3776:HG2_Ill_MetaSV_3605:HG2_10X_SVrefine210Xhap12_3397:HG2_PB_SVrefine2PBcRplusDovetail_8194:HG2_PB_SVrefine2PB10Xhap12_3379:HG2_PB_SVrefine2Falcon1plusDovetail_8821:HG2_PB_HySA_8731:HG3_PB_HySA_7141;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3397:HG2_Ill_MetaSV_3605:HG3_Ill_MetaSV_3776;NumExactMatchSVs=3;ClusterMaxShiftDist=0.185629;ClusterMaxSizeDiff=0.185629;ClusterMaxEditDist=0.259475;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=326;DistBack=33517;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:79322967-79322982;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4066.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:./.:0:0:0:0:./.:0:0:0:0:1/1:0:18:1/1:2:56:.:.:.
chr4	80704744	HG2_PB_SVrefine2PBcRplusDovetail_8196	A	CAGTGAGCAGAGATCGCACCACTGAACTCCAGCCAGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAGGTAATAATGTATCAGGAAGTAAATCAACCATTACAACACAGAATAAAAAGTGCTATACTCTGAGTGTTATGAGAAAGCTTAGGGATGCTTAGGGAAACCCATTAAGAAATGAAGTTTGCTATGAGGCTTCAAGAATAAGTAGAGGTTACCTAAAAACAGCAGAGTCAAGAAGGAGAGCATTTCAGGTACAGAATTGGAAGTGCTCACCCCACTACATACAATTTTGATATGTAATAGGTACATAAATAGATACAAAAATTAATAGAAATGGGAAGCAATCATGTCCCCTCCTCCTCCCAAAAACATCTAGGAAATTCTTATCTTTACATTGTGTCTTCAAAACTGTCTTCTTCCAGGTAGAACTATTCATCATATTATTTGCATGGTGATACTCTACCTTTTCTTTTCAGAAGATTGGATATGTTTTCTTTTGTCATATAATGAGAAATGTACTCCTATTTTGATTCGACAATCAGGAAGCCCAGAGCTATATTTAAATCTAAATTGAAGTGTCTTGTCATATGTTCCTGTTATAATTTTTTCAACAACCATATTTTGTTGAACAATATGTGTTTGGACCTCTCTCTTTAACTTTCTTTATAACTTGCCTGCAACTCTTGTGTTAAGTCACCTCAGACCATTTTTTAGAAGACTATGTGCATTATGAACAGTTATTTCTATAGTAATTTCT	20	PASS	ClusterIDs=HG4_PB_pbsv_4676:HG3_PB_assemblyticsfalcon_19620:HG2_PB_assemblyticsPBcR_19023:HG2_PB_pbsv_4640:HG4_PB_SVrefine2Falcon1Dovetail_2848:HG4_PB_SVrefine2PBcRDovetail_2384:HG3_PB_SVrefine2Falcon1Dovetail_2871:HG4_Ill_SVrefine2DISCOVARDovetail_3544:HG3_PB_SVrefine2PBcRDovetail_2109:HG3_Ill_SVrefine2DISCOVARDovetail_3568:HG2_PB_SVrefine2PBcRplusDovetail_8196:HG2_PB_SVrefine2PB10Xhap12_3382:HG2_PB_SVrefine2Falcon1plusDovetail_8823:HG2_Ill_SVrefine2DISCOVARplusDovetail_9549:HG2_10X_SVrefine210Xhap12_3403:HG4_PB_HySA_6964:HG3_Ill_GATKHCSBGrefine_3108:HG2_Ill_GATKHCSBGrefine_3123:HG2_PB_PB10Xdip_22644:HG2_Ill_manta_1295:HG2_Ill_SVrefine2DISCOVARplusDovetail_9548:HG3_PB_pbsv_4534:HG3_Ill_Spiral_5079:HG2_Ill_Spiral_322:HG3_Ill_MetaSV_3778:HG2_Ill_MetaSV_3607:HG4_Ill_MetaSV_3793;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3403:HG2_Ill_SVrefine2DISCOVARplusDovetail_9549:HG2_PB_SVrefine2Falcon1plusDovetail_8823:HG2_PB_SVrefine2PB10Xhap12_3382:HG2_PB_SVrefine2PBcRplusDovetail_8196:HG3_Ill_SVrefine2DISCOVARDovetail_3568;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0735484;ClusterMaxSizeDiff=0.0722581;ClusterMaxEditDist=0.155486;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=766;DistBack=4493;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:80704745-80704743;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9987;PctRecOverlap=0.9974;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4067.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:91:1/1:1:25:0:27:./.:0:0:0:0:1/1:0:28:./.:7:110:.:.:.
chr4	82630137	HG2_PB_SVrefine2Falcon1plusDovetail_8826	T	TATCAGACTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCTGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2851:HG2_PB_pbsv_4644:HG3_PB_assemblyticsfalcon_19633:HG4_PB_HySA_6980:HG4_PB_pbsv_4683:HG3_PB_SVrefine2Falcon1Dovetail_2875:HG2_PB_SVrefine2Falcon1plusDovetail_8826:HG4_Ill_MetaSV_3796:HG4_PB_SVrefine2PBcRDovetail_2386:HG2_PB_SVrefine2Falcon2Bionano_2230;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8826;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0617284;ClusterMaxSizeDiff=0.0617284;ClusterMaxEditDist=0.259427;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=-10;DistForward=11;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=4:82630138-82630148;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4068.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:36:1|0:4:26:19:5:./.:0:0:0:0:0/1:23:10:0/1:12:47:.:.:.
chr4	83322560	HG4_Ill_MetaSV_3798	T	TTGTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGG	20	PASS	ClusterIDs=HG2_PB_pbsv_4650:HG2_PB_SVrefine2Falcon2Bionano_2235:HG4_PB_HySA_6984:HG4_Ill_MetaSV_3798:HG2_Ill_GATKHCSBGrefine_3131:HG2_PB_HySA_8755;NumClusterSVs=6;ExactMatchIDs=HG4_Ill_MetaSV_3798;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0988235;ClusterMaxSizeDiff=0.0988235;ClusterMaxEditDist=0.145882;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=215;DistBack=6801;DistForward=9062;DistMin=6801;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=4:83322561-83322573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4069.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:36:./.:23:10:9:22:./.:0:0:0:0:0/1:29:7:./.:.:.:.:.:.
chr4	83340700	HG3_PB_HySA_7172	C	CTGCGGTGGCTCACGGCTGTAATCCCAGCCTTTGGGAGGCCGAGGGCGGGCGGATCACGAGGTCAGGAGAATCGAGACCATCCCGGCTAAAACGGTGTGAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGGCCTGTAGTCCCAGCTACTTGGAGGCTGAGGCAGGAAGAATGGCGGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCAGCTCCAGCCTGGGCGAAGAGCGAGACTCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTACTTGACCAGTCTT	20	PASS	ClusterIDs=HG2_PB_HySA_8756:HG3_PB_HySA_7172:HG3_PB_pbsv_4544:HG3_PB_assemblyticsfalcon_19644:HG4_PB_pbsv_4688:HG2_PB_assemblyticsPBcR_19053:HG2_PB_pbsv_4651:HG2_Ill_breakscan11_3459:HG3_PB_HySA_7171:HG3_PB_SVrefine2Falcon1Dovetail_2880:HG3_PB_SVrefine2PBcRDovetail_2114:HG2_PB_SVrefine2PBcRplusDovetail_8202:HG4_PB_SVrefine2Falcon1Dovetail_2854;NumClusterSVs=13;ExactMatchIDs=HG3_PB_HySA_7172;NumExactMatchSVs=1;ClusterMaxShiftDist=0.119581;ClusterMaxSizeDiff=0.119581;ClusterMaxEditDist=0.227338;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=341;DistBack=3;DistForward=249;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:83340701-83340701;PctSeqSimilarity=0.9623;PctSizeSimilarity=0.9912;PctRecOverlap=0.9443;SizeDiff=3;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=96;MatchId=4070.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:52:./.:13:18:6:10:./.:0:0:0:0:./.:21:2:0/1:7:11:.:.:.
chr4	83633449	HG2_PB_assemblyticsfalcon_19695	ATT	TATATATATATATATGTATATATATATATATATATATATATACGTATATATATATATATATGTATATATATATACGTATATATATATATATATGTATATATA	20	PASS	ClusterIDs=HG3_PB_pbsv_4547:HG2_PB_SVrefine2Falcon1plusDovetail_8832:HG2_PB_assemblyticsfalcon_19695:HG3_Ill_MetaSV_3786:HG2_PB_pbsv_4653;NumClusterSVs=5;ExactMatchIDs=HG2_PB_assemblyticsfalcon_19695;NumExactMatchSVs=1;ClusterMaxShiftDist=0.05;ClusterMaxSizeDiff=0.0497512;ClusterMaxEditDist=0.21;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=99;DistBack=52;DistForward=3743;DistMin=52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=4:83633444-83633448;PctSeqSimilarity=0.9454;PctSizeSimilarity=0.9519;PctRecOverlap=0.5714;SizeDiff=-5;StartDistance=42;EndDistance=44;GTMatch=0;TruScore=82;MatchId=4071.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:25:0|1:27:1:2:23:./.:0:0:0:0:0/1:20:5:./.:.:.:.:.:.
chr4	83809550	HG2_Ill_scalpel_4575	T	TATGCGTATATATACGCATATATATATATACGCGTATATATATACGCGTATATATATAC	20	PASS	ClusterIDs=HG4_PB_HySA_6990:HG3_Ill_scalpel_4656:HG3_Ill_GATKHC_7799:HG3_Ill_GATKHCSBGrefine_3121:HG4_Ill_scalpel_4487:HG4_PB_pbsv_4690:HG4_Ill_manta_1156:HG4_Ill_GATKHC_7859:HG4_Ill_GATKHCSBGrefine_3292:HG4_Ill_FB_4334:HG4_Ill_150bpfermikitraw_6260:HG2_Ill_scalpel_4575:HG2_Ill_GATKHC_7789:HG2_Ill_GATKHCSBGrefine_3135:HG2_PB_pbsv_4654;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3135:HG2_Ill_GATKHC_7789:HG2_Ill_scalpel_4575:HG4_Ill_150bpfermikitraw_6260:HG4_Ill_FB_4334:HG4_Ill_GATKHCSBGrefine_3292:HG4_Ill_GATKHC_7859:HG4_Ill_manta_1156:HG4_Ill_scalpel_4487;NumExactMatchSVs=9;ClusterMaxShiftDist=0.113821;ClusterMaxSizeDiff=0.0813008;ClusterMaxEditDist=0.31746;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=-1;DistForward=56178;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=4:83809549-83809552;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4072.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:1|0:4:26:26:3:./.:0:0:0:0:0/1:5:9:./.:.:.:.:.:.
chr4	84483325	HG2_Ill_svaba_5961	T	TTATATATTATATATATATATATATATAATATATATATATTATATATATATATATATATAATATA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6050:HG2_PB_pbsv_4661:HG3_PB_HySA_7185:HG3_PB_pbsv_4559:HG3_Ill_svaba_6077:HG3_Ill_GATKHC_7805:HG3_Ill_GATKHCSBGrefine_3124:HG3_Ill_250bpfermikitraw_6300:HG3_Ill_150bpfermikitraw_6118:HG2_Ill_svaba_5961:HG2_Ill_GATKHC_7796:HG2_Ill_GATKHCSBGrefine_3137;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6050:HG3_Ill_svaba_6077:HG3_Ill_GATKHC_7805:HG3_Ill_GATKHCSBGrefine_3124:HG3_Ill_250bpfermikitraw_6300:HG3_Ill_150bpfermikitraw_6118:HG2_Ill_svaba_5961:HG2_Ill_GATKHC_7796:HG2_Ill_GATKHCSBGrefine_3137;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.246154;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=41061;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=53;REFWIDENED=4:84483324-84483379;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4073.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:35:./.:10:7:8:15:./.:0:0:0:0:0/1:10:27:./.:.:.:.:.:.
chr4	86470370	HG3_Ill_GATKHCSBGrefine_3128	T	TAAGAAATTGCCAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTAGTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3460:HG3_PB_HySA_7204:HG2_PB_pbsv_4669:HG3_PB_pbsv_4565:HG3_PB_assemblyticsfalcon_19664:HG3_PB_SVrefine2Falcon1Dovetail_2886:HG4_PB_SVrefine2Falcon1Dovetail_2860:HG3_PB_SVrefine2PBcRDovetail_2120:HG3_Ill_MetaSV_3790:HG3_Ill_GATKHCSBGrefine_3128:HG2_PB_HySA_8789;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_3128:HG3_Ill_MetaSV_3790;NumExactMatchSVs=2;ClusterMaxShiftDist=0.134831;ClusterMaxSizeDiff=0.131621;ClusterMaxEditDist=0.179878;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=27811;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=4:86470371-86470382;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4074.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:./.:9:17:11:3:./.:0:0:0:0:0/1:32:8:0/1:8:29:.:.:.
chr4	86505078	HG3_Ill_svaba_6091	T	TATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAACAAACAAACAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_4703:HG2_PB_PB10Xdip_22660:HG3_PB_pbsv_4566:HG4_Ill_svaba_6094:HG4_Ill_manta_1159:HG4_Ill_Krunchall_6903:HG4_Ill_GATKHC_7875:HG4_Ill_GATKHCSBGrefine_3296:HG4_Ill_250bpfermikitraw_6575:HG4_Ill_150bpfermikitraw_6281:HG3_Ill_svaba_6091:HG3_Ill_Spiral_5112:HG3_Ill_Krunchall_6529:HG3_Ill_GATKHC_7817:HG3_Ill_GATKHCSBGrefine_3129:HG3_Ill_250bpfermikitraw_6312:HG3_Ill_150bpfermikitraw_6132:HG2_PB_assemblyticsPBcR_19079:HG2_Ill_svaba_5974:HG2_Ill_manta_1303:HG2_Ill_Krunchall_6648:HG2_Ill_GATKHC_7809:HG2_Ill_GATKHCSBGrefine_3141:HG2_Ill_250bpfermikitraw_6521:HG2_Ill_150bpfermikitraw_6064:HG3_PB_assemblyticsfalcon_19666:HG3_PB_HySA_7206:HG2_PB_HySA_8791:HG2_PB_pbsv_4670:HG4_PB_HySA_7000;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6064:HG2_Ill_250bpfermikitraw_6521:HG2_Ill_GATKHCSBGrefine_3141:HG2_Ill_GATKHC_7809:HG2_Ill_Krunchall_6648:HG2_Ill_manta_1303:HG2_Ill_svaba_5974:HG2_PB_assemblyticsPBcR_19079:HG3_Ill_150bpfermikitraw_6132:HG3_Ill_250bpfermikitraw_6312:HG3_Ill_GATKHCSBGrefine_3129:HG3_Ill_GATKHC_7817:HG3_Ill_Krunchall_6529:HG3_Ill_Spiral_5112:HG3_Ill_svaba_6091:HG4_Ill_150bpfermikitraw_6281:HG4_Ill_250bpfermikitraw_6575:HG4_Ill_GATKHCSBGrefine_3296:HG4_Ill_GATKHC_7875:HG4_Ill_Krunchall_6903:HG4_Ill_manta_1159:HG4_Ill_svaba_6094;NumExactMatchSVs=22;ClusterMaxShiftDist=0.156028;ClusterMaxSizeDiff=0.156028;ClusterMaxEditDist=0.269504;PBcalls=9;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=73;DistBack=-1;DistForward=7628;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=4:86505077-86505080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4075.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:59:1/1:4:24:0:17:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr4	86607949	HG2_Ill_GATKHCSBGrefine_3143	T	TAAAAAATATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_19670:HG2_PB_pbsv_4672:HG2_PB_HySA_8795:HG3_PB_SVrefine2Falcon1Dovetail_2888:HG3_PB_pbsv_4569:HG3_Ill_GATKHCSBGrefine_3131:HG2_Ill_MetaSV_3618:HG2_Ill_GATKHCSBGrefine_3143:HG4_PB_SVrefine2Falcon1Dovetail_2862;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3143:HG2_Ill_MetaSV_3618:HG3_Ill_GATKHCSBGrefine_3131;NumExactMatchSVs=3;ClusterMaxShiftDist=0.12932;ClusterMaxSizeDiff=0.129176;ClusterMaxEditDist=0.25167;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=460;DistBack=17123;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=4:86607950-86607956;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4076.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:40:./.:21:12:2:17:./.:0:0:0:0:0/1:23:8:0/1:11:62:.:.:.
chr4	88229651	HG2_10X_SVrefine210Xhap12_3431	A	AAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAATCCGGCCTGGGCTAAACAGCGGGACTCCGTCTC	20	PASS	ClusterIDs=HG2_PB_pbsv_4679:HG2_PB_assemblyticsPBcR_19094:HG3_PB_pbsv_4577:HG2_10X_SVrefine210Xhap12_3431:HG2_PB_SVrefine2PBcRplusDovetail_8214:HG3_PB_HySA_7223:HG4_PB_pbsv_4712:HG2_PB_SVrefine2Falcon1plusDovetail_8845;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3431;NumExactMatchSVs=1;ClusterMaxShiftDist=0.190813;ClusterMaxSizeDiff=0.190813;ClusterMaxEditDist=0.268551;PBcalls=7;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=151;DistBack=2;DistForward=5911;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:88229652-88229653;PctSeqSimilarity=0.9934;PctSizeSimilarity=0.9868;PctRecOverlap=0.9868;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4077.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:29:./.:9:15:7:10:./.:0:0:0:0:0/1:3:7:./.:.:.:.:.:.
chr4	88790569	HG4_Ill_MetaSV_3812	C	CTTGTAAAGGGAAAGGATAATGTAAAATAGGTTGAGGAGTAGAAAAAGGGGAAATTATTTGTGACTGAATTAATATCTCCAACACTAGTCAAAATTTGTCTTAGAAGAGGACTTGATTTTATGACTACACTATGGATTTTCCCCAAAGAGTAACTTAAAATAAATATGAGAACCCAAATCATAGGATCATGGTGTTTTTGAAAGTGCCACTTAGAGTGAAAATGTCTTATGAAAACAAGCACTCTTGACTTGCTCTGCTTTTATAAATCAGGAATCAGTATTCCAAACTGATGTAGGAAAACAGCGAAAAAGTTTCTTTAGATCACAAAACTTACG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_2132:HG3_PB_pbsv_4583:HG4_Ill_Cortex_2679:HG3_Ill_Cortex_2702:HG2_Ill_Cortex_6382:HG4_Ill_Spiral_385:HG3_Ill_Spiral_5127:HG2_Ill_Spiral_328:HG3_PB_assemblyticsfalcon_19686:HG4_PB_pbsv_4719:HG2_PB_assemblyticsPBcR_19102:HG2_PB_PB10Xdip_22670:HG2_PB_PB10Xdip_22669:HG4_PB_HySA_7019:HG2_PB_pbsv_4686:HG4_PB_SVrefine2Falcon1Dovetail_2872:HG4_Ill_MetaSV_3812:HG4_Ill_GATKHCSBGrefine_3309:HG3_PB_SVrefine2Falcon1Dovetail_2899:HG3_Ill_GATKHCSBGrefine_3146:HG2_PB_SVrefine2PBcRplusDovetail_8219:HG2_PB_SVrefine2PB10Xhap12_3406:HG2_PB_SVrefine2Falcon2Bionano_2252:HG2_PB_SVrefine2Falcon1plusDovetail_8851:HG2_Ill_SVrefine2DISCOVARplusDovetail_9589:HG2_Ill_MetaSV_3630:HG2_Ill_GATKHCSBGrefine_3158:HG2_10X_SVrefine210Xhap12_3437;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3437:HG2_Ill_GATKHCSBGrefine_3158:HG2_Ill_MetaSV_3630:HG2_Ill_SVrefine2DISCOVARplusDovetail_9589:HG2_PB_SVrefine2Falcon1plusDovetail_8851:HG2_PB_SVrefine2Falcon2Bionano_2252:HG2_PB_SVrefine2PB10Xhap12_3406:HG2_PB_SVrefine2PBcRplusDovetail_8219:HG3_Ill_GATKHCSBGrefine_3146:HG3_PB_SVrefine2Falcon1Dovetail_2899:HG4_Ill_GATKHCSBGrefine_3309:HG4_Ill_MetaSV_3812:HG4_PB_SVrefine2Falcon1Dovetail_2872;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0884956;ClusterMaxSizeDiff=0.0825959;ClusterMaxEditDist=0.14245;PBcalls=15;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=335;DistBack=8023;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=4:88790570-88790573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4078.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:84:1/1:0:31:0:19:./.:0:0:0:0:1/1:0:20:1/1:2:46:.:.:.
chr4	89092659	HG4_PB_HySA_7022	A	ATAAATCTTGGGGTTTCACAAACGGAAATTACGAGGTATAGGAAAGCGTGTCTTACATCTCAGGATATTTCCATATATTGCCTAGTTCAGTGCCTTGAACACAAGGATATACTCAGTAAATATTTGTTGTCTGAATAATAAAAGTGAGCTTATCTTATGTAATTCAGGAACCTATCTACCCTCACCTGAATCTGCCTTGCTGTGAAAATGGAGAAGAGTTTCATGAAAGACTGACCTTTCATATGATCCATTTCTGACTACTATAAAACATTTTATTGCCTATAGAGAAGATTTTATATTTATGGGAGCAATTAAAATTAAAGCTCAATCAGCATTAAATAAAGTTATGATTCATTATACAGTGACTTGGAATTTTTTCACATCTGGTTGGCATACTTAATATATGATGTCAACATCTCACCTAAAACTACATTTTAGTCTTCCCTCTGTCATCATAATATTAGACCAAGAAACATTATACTGTGTGTGACAAAGCCATCAGCCCAATCTATTTTCTTTAATTCTTAATTTTAATTTTTTGTGGGTACATAGTTAGGTACATATATTTATGTATACATGAGATGTTTTGATACAGGCATGCAATGTATAATAATCACATCATGGCAAATGGGGTATTCATCTCCTCAAGATTTTATCCTTTGTGTTACAAACAATCCAGTTATACTCATTTCATTATTATAAAATGTTATAATTAAATTATTATTGGCTGGGTGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCTGGTGGATCACCTGAGGTCAGGAGTGCAAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTGCTAAAAATACAAAACAATTAGCCGGGCGTGGTGGCAGATGCCTGTAATCTCAGCTACTCAGGAAACTGAGGCATGAAGAATTGCTTGAACCTGGAAGGCGGAGGTTGTAGTGAACCAAGATGGTGCCACTGCACTCCAGCCTGGGGGATAGAGGGAGACTCTGTCTCCAAAAAAAAAAATTATTATTATTGACTATGGTAACCCTATTGTGCTATCAAATACTAGGTCTTATTCATTCTATATTTTTGTAGCCGTTAACTATCCCCACCTCCTTCTTACCCCAATACCCTTCCCAGTCTCTGATAACCATCCTCCTACTCCCTATCTCCATTTCAATTGTTTTGATTTTTAGATCTCACAAATGACTGAGAATATGCAATGTTTGCCTTTCTGTGCTTGGCTTATTTCACATAGCATCATGACTTCCAGTTCCATCTATGTTGTGGCAAATAACAGGATCTCATTCTTATATATATGGCTATATAGTACTCCATTATGTATATGTACCACATTTTTATTTATCCCTTCATCTGTTGACAAACACTTAGGTTGCTTCCTAATTTTGGCTATTGTGAACCGTGCTGCAACAAAAATGGGAGTGCAGATATCCGTTTGATATAATGATTTCCTTTCTTTGGGGTATATACCAAAGCAGTGGGATTGCAGGCTTATATTGTACCTCTATTTTTAGTTTGTTGAGGAGCCTCCAAAATGTTCTCCATAGTGATTGCACTAATTTACATCCTCACCAACAGTGTACAAGGGTTCACTTTTCGCCACATCCTTGCCAGCATTTGTTTATTATCTGTCTTTTGGATAAAAGCCATTTTAACTGAGGTGAGAGGATATCTCATTGTAGTTTTGATTTGCACTTCTCCCATAATCAATAATGTTGAGCACCTCTTCATATGCCTGTTTGCCATTTGTGTGTTGTCTTTTGAGAAATGGCTATTCAAATCTTTGGTCCATTTTAAAATCAGATCATCAGATTTTTTTTCCTATAGAGTTGTTTGAGCTCCATATATACTCTGGATACTAATCCCTTGTTAGCTAGGTAGTTTGCAAATATTTTCTCCCTCTGTGTGGGTTGTCCCTTCACACTGTTGTTTCGTTTGCTGTGCAGAAGCTTTTTTTACTTCATATGATCCTATTTGTCCATTTTTGCTTGGTTGCCACTGCTCGTGGGGTATCACTCAGGAATTTTTGCTGAGTCCAATCTCATAGAGAGTTTCCCCAGTGTTTTCTTAGTTTGAGGTCTTAGATTTAACTCTTTAATCTGTTTTGATTTGAACTTTGTATATGGCAAGAGATAGGGGTCTAGTTTCATTTTTCTGCATATGGACACCCAGTTTTCCCAGCACCATTTTTTGAAGAGGTGGTCTTTTCCCCAGTGTATGTTCTTGGCACCTTTGTCAAAAGTGAGTTCACTGTAGGTGTGTGGATTTGCTTCTGGGTTCTCTATTCTGTTCCATTTGTCTATGTCTATTTTTATGCCAGTATGATTCTATTTGTTACTTATATCTCTGTGGTAAAATCAGAAGTCACGGTAATGTTATGTCCTCCAGTTTTGCTCTTTTTGCTGAGGATAGCTTTGGCTATTCTGGGTCTTTTGTGGTTCCATATAAATTTTAGGAGTGTTTTTTCTATTCTAATGAAGAATGTCATTGATATTTTGATAGAGATTGAACTGAATATGTAGATTATTTGGGGGTACTATGAACACTTTAATAATATTGATTTTTCCAATCTATGAACATGAAATATCTTTCCATTTTTTTGGTGTCCTCTTCAATTTCTTTCATCAGGGTTATATAGTTTTCATTGTAGAGATCTTTTACTTCTTTAAGTTAATTCCTGGGTATTTAATTTATTTGTCACTACTGTAAGTGGGATTTCATTTTCAGATTGTTCACTGTTGGTACATAGAAGTACTACTGATTTTTGTATGTTGATTTTGTATCCTGCAACTTTATTGAATTTGTTTATCAGTTCTAATAATTATTTTTGTGGAGTCCTTAGGTTTTTCCAATATATAAGATCATCACATCTGCAAACAAGGATAATTTGACTTCTTTCCAATTTGGATGACCTTTATTTCTTGTCTTGACTGATTGCTCTAGCTAGGACTTCCAGGTACTATGTTGAATAACAGTGGTGAAAGTGGACATCTTTGTTGTGTTCCAGGTCTTAGAGAAAAGGCTTTCAGTTTCTCCCCATTCAGTATGTTACTAGCTGCGGGTCTGTCATAAATGACTTTCATTATATTGAGATATGTTCCTTCTATACCCAGTTTTCTAAAAAGGTTTTTGTCATGAAGGGATGTTGAAAGTGATCAAAATGCTTTTCCAGCATCAGTTGAAATAATCATACGGTTTTTGTCCTTCATTCTGTTAACATGATATATCGCAAATGATTGATTTGCATATGTTGAACCATCCTTGCATCCCTAGAATAAATTCCACTTGGTGATAATGAATGATCTTTTTTAACGTATTGTGAATTCAGCTTGCTAATATTTTGTTGAGGATTTTGCATCAAATATTTATCAGAGATATTTCCCTGTAGTTTCATTTTTTTGATGTGTCTTTGATTTTGGTATCAGGGTAACACTGGCCTCACAGAATGAGTTTGGAAGTATTCCCTATTTTTTGAAATAATTTGAGTAGGATTGGGTATTAGTTCTTTCTTTAAATGTTTGATAGAATTCAGCAATGAAGTCATCGGGTCTAGGCTTTTCTTTAGTGGAGTCTAGTGCACCCAGATACATAAAGCAAATATTATTAAAGCTAAAGAGCTAGGCCCCAATACAATAATAGCTGGAGACTGCAATACCCCCAAGATCATTGGGTCTTGCTTTTTTTTTGAGACAGAGTTTCACTCTTGTTGACCAGGCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTTAGCCTCCGGAGTAGCTAGGATTACAAGTGTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCGTCATGTTGGCCAGGGTGGTCTTGAACTCTCGACCTCATGTGATTCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATCAGCCACCACACCTGGCCAGGTTTGCTTTTTTTTTTTAATCCATTCAGCCATTCTATGTCTTTTGATTGGAGAATTTGGTCCATTTACATGCAATGTTATTATTGCTAAGTAAGGACTTAGTCCTGCCATTTTATTTATTTTCTTGGTTTTTTTTTTTTTGTTTGTTTCTTTTTTTTTTTTTTTTGTGGTCTTCTTTCCTTCCTTACTGTCTTCCTTCTAGTGAAGGTGATTTTCTCTGGTGATATGATTTAATTTGTTGCTTTATTTTTCTTGTATTTGTTGCATGTTTTAGGGTTTGGGGTTACTATGAGGCTTGCAAATACTATCTTATAACCCATTATTTTAAGCCAATAAGATTTTTAGATCCACAAATGAGTGGGATGAACCTTCCAGGTCACTAATTCTTTATACAGTTGTATTAACCTCCTGTTTAATCTTCTATCCATTTGAATTCTTAATTTCAATTATCAGGGTTTTAATTTCTATTATTTTTGTTTTTAATTTTAGAGATAGGGTCACTCTCTGTTGCCAGGCTGAAGTGCAGTGGCACAATTCATAGCTCACTGCAGCTTCAAACTCCTGGATTCAGGAAGCCTCCCATCTCAGACTCCAGAGCAGCTGGGACTACAAGCACGTGCCAACATGCCCTGCTAATTTTTTTTTTTTTACAACTTTTTTGGAGACAAGGTCTCACCACACATTGCCCAGGCTGTTCTCACACTCCTGGCCTCAAGCCATCCTCCTGCCTCAGCCTCCAGAGCAGCTGGGACTACAGGCAGACACCACCACACCTGGCTAGGGTTTTTATTCTAAAAGTACTAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8853:HG2_PB_pbsv_4688:HG2_10X_SVrefine210Xhap12_3439:HG2_PB_SVrefine2PB10Xhap12_3408:HG2_PB_SVrefine2PBcRplusDovetail_8221:HG4_PB_SVrefine2Falcon1Dovetail_2874:HG4_PB_pbsv_4721:HG4_PB_HySA_7022:HG2_PB_PB10Xdip_22671:HG2_Ill_breakscan11_3461:HG2_PB_assemblyticsfalcon_19750:HG4_Ill_SVrefine2DISCOVARDovetail_3586:HG4_PB_SVrefine2PBcRDovetail_2403:HG3_PB_SVrefine2Falcon1Dovetail_2901;NumClusterSVs=14;ExactMatchIDs=HG4_PB_HySA_7022;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0458839;ClusterMaxSizeDiff=0.0458839;ClusterMaxEditDist=0.160155;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=4779;DistBack=-1;DistForward=373;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:89092660-89092660;PctSeqSimilarity=0.9954;PctSizeSimilarity=0.9956;PctRecOverlap=0.9958;SizeDiff=21;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4079.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:49:./.:22:13:0:18:./.:0:0:0:0:0/1:20:9:0/1:162:331:.:4815:.
chr4	89963252	HG2_PB_SVrefine2PB10Xhap12_3411	C	CAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_7028:HG4_PB_pbsv_4727:HG2_Ill_MetaSV_3633:HG3_PB_pbsv_4589:HG4_PB_SVrefine2PBcRDovetail_2406:HG2_PB_SVrefine2Falcon2Bionano_2256:HG3_PB_SVrefine2Falcon1Dovetail_2903:HG2_PB_SVrefine2PBcRplusDovetail_8224:HG2_PB_SVrefine2PB10Xhap12_3411:HG2_PB_SVrefine2Falcon1plusDovetail_8856:HG4_PB_SVrefine2Falcon1Dovetail_2877:HG4_Ill_GATKHCSBGrefine_3315:HG2_Ill_GATKHCSBGrefine_3162:HG2_10X_SVrefine210Xhap12_3444:HG3_PB_HySA_7236:HG2_PB_HySA_8830:HG2_PB_assemblyticsPBcR_19112:HG2_PB_PB10Xdip_22674:HG2_PB_pbsv_4692;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8856:HG2_PB_SVrefine2PB10Xhap12_3411:HG2_PB_SVrefine2PBcRplusDovetail_8224:HG3_PB_SVrefine2Falcon1Dovetail_2903;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0979955;ClusterMaxSizeDiff=0.0935412;ClusterMaxEditDist=0.215385;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=217;DistBack=65394;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=4:89963253-89963255;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9954;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4081.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:0:6:0:20:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr4	90278578	HG3_Ill_Cortex_2704	T	TCCTCATGGCTGCACTAAGTCCCCTGGGGCACAGTCCTGCTTCTCTATTCCCAATGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_22675:HG2_PB_pbsv_4694:HG4_Ill_svaba_6127:HG4_PB_pbsv_4730:HG4_Ill_scalpel_4527:HG4_Ill_manta_1168:HG4_Ill_Krunchall_6947:HG4_Ill_GATKHC_7919:HG4_Ill_GATKHCSBGrefine_3316:HG4_Ill_Cortex_2682:HG4_Ill_250bpfermikitraw_6606:HG4_Ill_150bpfermikitraw_6313:HG3_PB_assemblyticsfalcon_19696:HG3_Ill_svaba_6120:HG3_Ill_scalpel_4694:HG3_Ill_manta_1082:HG3_Ill_Spiral_5134:HG3_Ill_GATKHC_7853:HG3_Ill_GATKHCSBGrefine_3150:HG3_Ill_Cortex_2704:HG3_Ill_250bpfermikitraw_6332:HG3_Ill_150bpfermikitraw_6156:HG2_PB_assemblyticsPBcR_19114:HG2_Ill_svaba_6001:HG2_Ill_scalpel_4610:HG2_Ill_manta_1314:HG2_Ill_SpiralSDKrefine_12453:HG2_Ill_Krunchall_6683:HG2_Ill_GATKHC_7845:HG2_Ill_GATKHCSBGrefine_3163:HG2_Ill_Cortex_6384:HG2_Ill_250bpfermikitraw_6549:HG2_Ill_150bpfermikitraw_6095:HG2_Ill_breakscan11_3462:HG4_PB_HySA_7030:HG3_PB_HySA_7239:HG2_PB_HySA_8833:HG2_PB_PB10Xdip_22676;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6095:HG2_Ill_250bpfermikitraw_6549:HG2_Ill_Cortex_6384:HG2_Ill_GATKHCSBGrefine_3163:HG2_Ill_GATKHC_7845:HG2_Ill_Krunchall_6683:HG2_Ill_SpiralSDKrefine_12453:HG2_Ill_manta_1314:HG2_Ill_scalpel_4610:HG2_Ill_svaba_6001:HG2_PB_assemblyticsPBcR_19114:HG3_Ill_150bpfermikitraw_6156:HG3_Ill_250bpfermikitraw_6332:HG3_Ill_Cortex_2704:HG3_Ill_GATKHCSBGrefine_3150:HG3_Ill_GATKHC_7853:HG3_Ill_Spiral_5134:HG3_Ill_manta_1082:HG3_Ill_scalpel_4694:HG3_Ill_svaba_6120:HG3_PB_assemblyticsfalcon_19696:HG4_Ill_150bpfermikitraw_6313:HG4_Ill_250bpfermikitraw_6606:HG4_Ill_Cortex_2682:HG4_Ill_GATKHCSBGrefine_3316:HG4_Ill_GATKHC_7919:HG4_Ill_Krunchall_6947:HG4_Ill_manta_1168:HG4_Ill_scalpel_4527:HG4_Ill_svaba_6127;NumExactMatchSVs=30;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.273504;PBcalls=9;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=28;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=-1;DistForward=24;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=221;REFWIDENED=4:90278575-90278795;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4082.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:./.:0:0:0:0:./.:0:0:0:0:1/1:0:53:./.:.:.:.:.:.
chr4	91294079	HG2_PB_HySA_8837	T	TATAAAGAAATAAAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCAGCTACTGGGAGGCTGAGACAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3413:HG2_PB_pbsv_4696:HG3_PB_assemblyticsfalcon_19699:HG2_PB_assemblyticsPBcR_19118:HG2_PB_HySA_8837:HG2_PB_SVrefine2PB10Xhap12_3414:HG2_Ill_breakscan11_3463:HG4_PB_pbsv_4731:HG2_PB_SVrefine2PBcRplusDovetail_8226:HG4_PB_HySA_7033;NumClusterSVs=10;ExactMatchIDs=HG2_PB_HySA_8837;NumExactMatchSVs=1;ClusterMaxShiftDist=0.248086;ClusterMaxSizeDiff=0.248086;ClusterMaxEditDist=0.324655;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=344;DistBack=101065;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:91294080-91294080;PctSeqSimilarity=0.9871;PctSizeSimilarity=0.9857;PctRecOverlap=0.9885;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4083.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:53:0|1:17:0:1:44:./.:0:0:0:0:0/1:36:13:0/1:19:49:.:.:.
chr4	91966952	HG2_PB_SVrefine2Falcon2Bionano_2259	C	CGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAGCAATAAAGCTTTTTAATCACCTGGGTGCAGGCGGGCTGAGTCAGAAAAGAGAGTCAGCGAAGGGAGATAGGGGTGGGGCTGTTTTACAGGATTTGGGTAGATAATGGAAAATTACAGTCAAAGGGGGTTCTCTGGCGGGCAGGGGCAGGGGTCACAAGGTGCTCAATGGGGGAGCTTCTGAGCCAGGAGAAGGAATTTCACAAGGTAATGTCATCAGTTAAGGCAGGAACCGGCCATTTTCACTTCTTTTGTGATTCTTCACTTGCTTCAGGCCATCTGGATGTATATATGCAGGCTTGGGCTCAGAGGCCTGACATTCCTGTCTTCTTATATTAATAAGAAAAATAAAATAGTGTTGAAGTGTTGGGGGTGGTATGGAGAGATAATGGGCGATGTTTCTCAGGGCTGGTTCCAGCGGGATTAGGGGTGGTGTGGGAACCTAGAGTGGGAGAGATTAAGCTGAAGGAAGATTTTGTGGTAAGGGGTGATATTGTGGGGTTGTTAGAAGAAACACTTGTTGTGTAGAATGATTGGTGATGGCCTGGATGCAGTTTTGTATGAATTGAAAAACTAAATGGAAGACACAAGGTCCGAATAAGAGAAGGAGAAAAACAGGTATTAAAGGACTAAGAATTGGGAGGACCCAGGACATCCAATTAGAGAGTGCCCAAGGAGGTTCAGCATAGCCCTGCCAGCAAAGATTATTTACTTTAAGAGGGAGTTAAGAGTGGCAGTCTGGGGTTAGCACCAGGAGATCTCAGCTGTGATGGCTTGGAGAAACAGTGTAAACCAGCAGTGTAAACCAGCAGTGTAAACAAGAGCAGGGCATTTATGAGTAATTGAGAACGGTGAATGGGAGTATGACTAGACAGAAGATAGTAGGGATGACAGGTTTTTGGGGCACTGTCCAAGTTGGGCTGGTGTCTGGAATGAGGCTGGGGCCTAGTAAAAAGGAGTGTCCATACAGGAGCTCAAATGGGCTGTAGCCTGTAGCATTCTGAGGACAGGCCCGAATTCTGAGAAGGGAAAGTGGTAAAAGTATTGTCCAGTCCTTTTTAAGTTTGTGGCTGAGCTTGGTGAGGTGTGTTTTTAAAAGACCATTTGTCTGTTCTACCTTTTTTGAAGATTGAGGACAGTAAGGGGTATGAAGGTTTCATTGAATATCAAGAGCCTGAGAAACTGCTTGGGTGATTTGAATAGTAAAGGCCGGTCTGTTATTAGACTGTATAGAGGTGGGAATTATGTCTGACAGAAGGGAATAAATGATCGCAGTGGCCTTCTCAGACCCTGCAGGAAAGGTCTCTACCCATCCAGTGAAAGTGTCTACCCAGACCAAGAGGTATTTTAGTTTCCTGACTCGGGGCATGTGAGTAAAGTCAATTTGCCAGTCCTGGGCAGAAGCAAATCCCCAAGCTTGATGTGTAGGGAAGGGAGGGGGGCCTGAGAAATTCCTGAGGAGTAGTAGAATAGCAGATGGAATACTGAGAAGTGATTTCCTTAAGGATAGATTTCCACGATGGAAAGGAAATGAGAGGTTCTAAGAGATGGGCTAGTGGCTTGTAACTTACATGGAAGAGTTTATGAAATGACGACACAATGCAATAGGCCTGTGAGGCCGGAAGGAGATATTTTCCTTGGTCCAAGAACCATTTGCCTTGTGTGGGAAGAGATTGATAGGTGGCAGTTTCAGCTGGGGAGTAGGTGAGAGTGAACGATGGATGAGAAGAAGAAAAACTGGCCGTGAGGGACAGAAGTTGGAATGTTAGCTGCTTCTTTAGCTACGTTATCAGCATAAGCACTGCCTAGAGCAATGGGATATGACGCCTTTTGATGGCCCTTGCAGTGAATGACTCCAGCTTCCTTTGGAAGCAAAGAGGCCTTGAGAAGAGTTTTTATTAAAGAGGCATTAATGATGGAGGACCTTTTGTGTAGTAAGGAAACCTCTTTCTGCCCATGTAACAGCATGGTGGTGCAGGATATGGAAGGCATATTTAGAGTCAGTATAAGTATTGATGTGTAGTCCCTTTGCAAGAGTGAGGTCCCGAGTTAAGGCAATGAGTTCAGCTTGCTGAGAGGTAGTGGAGCGGGGCAGAGCAGTAGCCTCAATTATAGATGTGGAAGATACTATATAGCATAGCCTGCCTTTGCTGGTGAGTGGTGATTAGGCCTGGTGGAACTGCCATCAGTAAACCAAATGTAATCAGGGTGAGGAACAGGAAAGAAGGAAATATGGGGAAATGGGGCAAATGTCAGGTGGATCAGAGAGATACAGTCTTGGGGGTCAGGTGTGGTATCCGGAATAATGTCGGAGGCCGGATTGAAGTCCGGCCAATGATACCTGTGGGAGACTCAACAAAGAGTGAGTATAGCTGAAGGAGCCAGGGAGCAGAAAGTATATGTGTCAGATGTGAGGAAGAAAATAAATTTTGGAAGTTATGAGAGCTGTAGAGAGTGAGTTGAGCATAGTTTGTGAGTTTGAGGGCCTCTCAAAGTATTAGGATGGCGGCAGCCGCTGCACGGATACATGATGGCCAGCCTAAAACAGTAAGGTCAAGTTGTTTGGACAAAAAGGCTACAGGGTGCAGTCCCAGTCCTTGTGTAAGAATTCTGACTGCACAGTCCTGTACTTTGGCTGTGTGTAATGAAAAGGGTTGGGATGAGTCAGGGAGAGATAGTGTGGGGGCAGTCTCTAAAGCTGTCTTCAAGGAACAGAAAAAGGAGTGGGAAAGGATTTAGGATCTATGGGGTCAGCTAGGTTTCCTTTTGTGAGTTTATATAATGGTTTTGTTAGGATGGTAAAACTAGGTATCCAAAGGTGGAAGTACCTAACCATGACTAGGAAGGAAAGAGTTGTTGTTTTGTAGAAGGTATTGGGGTTTGAGATATCAGTCAGACACGATCAGGAGGCAGAGCACATGTGTTTTCATGAAGAATTATGCCAAGATAGGTAATGGATGAGGAAGAAATTTGAGCTTGACTGAAGTAATGGGGGCTGTCCGTGAAGCCTTGTGGCAGTACAGCCCAGGTAATTTGCTGAGGCTGATGGGTATCAGGGTCAGTCCAAGTGAAAGTGAAGACAGGCTGGGATGAAGGCTGCAAAGGAATAGTAAAGAAAGCATGTTTGAGATCCAGAACAGAATAATGGGTTGTGGAGGTGTTGTCGGGGGAGGTATCGAGGATAGGAGAGTATATGGGTTTGGCACCATGGGGTGGATAGGCAAAACAATTTGGTTGATAAGGTGCAGATCCTGAACTAACCTGTAAGACTTGTCTCGTTTTTGGACAGGTAAAATGGGGGAATGTAAGGAGAGTTTATAGGCTTTAAAAGGCCATGCTGTAACAGGCAAGTGATAACAGGCTTTATTCCTTTTACAGCCTGCTGTGGGATGGGATATTGGCGTTGAGTGGGGTAAGGGTGATTAGGTTTTAATGGGATGGTAAGGGGTGCATGATTGGTCGCCAAGGATGGAGTAGAGATGTCCTATACTTGTGGATTAAGGTGGGGAGATACAAGGGGAGGATGTGAAGGAGGCTTTGAACTGGGGAAATGGGTGGCAATGAGGTGTGGCTGTAGCCTAGGAATGGTCAGGGAAGCAGATAATTTAGTTAAAATATCTTGGCCTAATAAGGGAACTGGGCAGGTGGGGATAACTAAAAAGGAGTGCATAAAAGAATACTGTCCAAGTTGGCACCAGAGTTGGGGAGTTTGAAGAGGTTTAGAAGCCTGGCCATCAATACGCACAACAGTTATGGAGGCAAGGGAAACAGGCCCTTGAAAAGAAGGTAATGTGGAGTGGGTAGCCTCTGTATTGATTAAGAAGGGGATGGACTTACCCTCCACTGTAAGAGTTACCCAAAGCATCTGTGATGGTCCAGGAGGCTTCCAAGGCAAACAGGCAGCGCCAGTCTTCAGCCACTAAGCTGAGAAGATCTGGGAAGAAGTAAGTCAGAGCCTTGGGCTAGTTGGACAGTTGAATTTCCAGTGGGGACCCACACAGCTGGGACACAGCTTAGGAGGAATCCCAGGCTGCAGGCATTCCTTGGCCTGGTGGCCAGATTTCCGGCACTTGAAGCAAGATCCTGGGGGAGGAGGTCCTGAAGGAATGCCTCACCACTGTGGCTTAGGCATTTTGAAGTTCTTGTGTGCTGGAGATGTGGCTGGGGTTTCTCTCACAGTGGAGGCAAGGAACTGCAACTCAGAAATACCTTGCTACTTGGCTGCCTCTACTCTACTATTATACAACTTGAAGTTGAGGTTAATTAAGTCCTATTGTGGGGTTTGAGGGTGGGAATTTAATTTTTGGAATTTTATTTAATGTTGGGAGTAGATTGGGTAATAAAATGTATATTGAGAATAAGATGGCCTTTTGACCTTTTAGGGCCTAGGGCCGTAAAGCGTCTCAGGGTTGCTGCCAAATGAGCCATGAACTGGGCTGGGTTTTTATATTTGATGAAAAAGAGCCTACATGCTAACTGATTTGGGAGAGGTTGGTTAAAGAAAAAGGAGCAGTAACCTTGACTATGCCTTTAGCTCCAGCCACCTTTTAAAGAGGAAATTGCTGGGCAGGTGGGGGAGGGCTAGTTGCAGAACAAAACTGTAAGCTGGACTGGATGGGAAGAGGGGAGGTGATAAAAGGATTATAGGGCGGGGGAGCGGAGGCTGAGGAAGAATTGGGACCTGGCTCAGGGCGGGGAGCAGCCTGGGGAAGAGGGGAGAGGTCAGATGGGTCTGTAAAAAAGGAATATTGGAAAGACTCAGCAACACTTGGGGTTGGGACTGAGGGGACAGGCAGAGGGGAAAGAAGGAAGATTTGGGATGAGTTGTATTGGGAACGACGACTAGGGAGGGACCAATGTGTAAAAGAATGCCTGGACGTCAGGCACCTCAGACCATTTGCACATTTTACAACAAGAATTATCTAGATCTTGTAGGATGGATAAATCAAAAGTGCCATTTTCTGGCTATTTGGAACCATTGTCAAGTTTGTATTGGGGTTAAGCAGCATTGCAGAAGAAAATAAAGCATTTAGGTTTTAAGTTAGGTGTGAGTTGAAGAGGTTTTAAGTTCTTGAGAACACAGGCTAAGGGAGAAGGAAGAATGGAGGGTGGAAGTTTGCCTATAGCGAAGGAGGCAAGCCCAGAGAAAAGAGAGGGTAGAGACACAGAAGGGGTGGGAGGTGCTTGTCCCCCCAGGAAAGTGGAGAGAAAAGAGAGGGTAAAGACACAGAGAGAAGGGGTGGGGGGTGCTTGCCCCCCAGGAAAGTGGAGAGAAAAGAGAGGGTAGAGACACAGAGTAGGGGTGGGGAGTGCTTGTCCCCCAGGAAAGTGGAGAGAACAGAGAGAGTAGAGACATGGAGAGAAGGGGTAGGTGGCGTTTGCCCCCCAAAAAATGGTGCTTGCCACTAAGGGTGAAGGACCAAGGCAGGCATCCCCATGGTGATCAGACACCTCTGAAACGTGGGTGAATAATCAAGCAGTCATCCCCACAGTGATTAAACACCAAGGGAAGACTGTCTTCCCTAGTTCATGACTGGTGCCGGAGTTTTGGGTTCACAGATAAAACACGTCTGTTCTGTCTCTACCAGAAAAGGAAAGGAACTGAAATTAAGAGAAGGGAGAGATTGAAAGATCGTGCCAAGATTGAAAGGAGAAAGATGTTGAGGGATACTGAGAGAGGTTGGAGAAGAGAGTAAAAAGAGGCCGCTTACCCGATTTAAAATTGGTGAAATGTTCCTTGGGCTGGTTGGTCTGAGGACCTGAGGTCATAGGTGGATCTTTCTCACCGAGCAAACAGCAGGAGGACAGGGGATTGATCTCCCAAGGAGGTCCCCCGATCTGAGTCATGGCATCAAATTTCGTGAGCTTCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8860:HG4_PB_pbsv_4738:HG3_PB_pbsv_4594:HG2_PB_PB10Xdip_22690:HG2_PB_PB10Xdip_22689:HG2_PB_HySA_8840:HG2_PB_assemblyticsPBcR_19123:HG3_PB_assemblyticsfalcon_19705:HG4_PB_SVrefine2Falcon1Dovetail_2881:HG2_10X_SVrefine210Xhap12_3450:HG2_PB_SVrefine2PB10Xhap12_3416:HG2_Ill_SVrefine2DISCOVARplusDovetail_9602:HG3_Ill_SVrefine2DISCOVARDovetail_3623:HG2_PB_SVrefine2Falcon2Bionano_2259:HG2_PB_SVrefine2PBcRplusDovetail_8228:HG4_PB_SVrefine2PBcRDovetail_2409:HG4_Ill_SVrefine2DISCOVARDovetail_3598:HG3_PB_SVrefine2Falcon1Dovetail_2907:HG3_PB_SVrefine2PBcRDovetail_2140;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2259:HG3_Ill_SVrefine2DISCOVARDovetail_3623;NumExactMatchSVs=2;ClusterMaxShiftDist=0.201702;ClusterMaxSizeDiff=0.201702;ClusterMaxEditDist=0.251748;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=5901;DistBack=8545;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=350;REFWIDENED=4:91966953-91967302;PctSeqSimilarity=0.9975;PctSizeSimilarity=1;PctRecOverlap=0.9514;SizeDiff=0;StartDistance=-287;EndDistance=-287;GTMatch=0;TruScore=98;MatchId=4084.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:128:1/1:0:37:0:34:./.:0:0:0:0:1/1:0:42:1/1:0:952:.:5702:.
chr4	92123916	HG2_Ill_scalpel_4616	T	TCATATATATGTGTGCATATATATGTGTGTGTGTATAGATATACACACTCA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6103:HG2_PB_HySA_8841:HG4_PB_HySA_7036:HG3_PB_HySA_7245:HG4_Ill_svaba_6131:HG4_PB_pbsv_4739:HG4_Ill_scalpel_4528:HG4_Ill_Krunchall_6955:HG4_Ill_GATKHC_7924:HG4_Ill_GATKHCSBGrefine_3319:HG4_Ill_FB_4366:HG4_Ill_250bpfermikitraw_6610:HG4_Ill_150bpfermikitraw_6318:HG2_PB_assemblyticsPBcR_19124:HG2_Ill_svaba_6006:HG2_Ill_scalpel_4616:HG2_Ill_GATKHC_7855:HG2_Ill_GATKHCSBGrefine_3168:HG2_Ill_FB_4285:HG2_Ill_250bpfermikitraw_6558:HG2_Ill_150bpfermikitraw_6104:HG2_PB_PB10Xdip_22692:HG2_PB_PB10Xdip_22691:HG3_PB_assemblyticsfalcon_19706:HG3_Ill_svaba_6126:HG3_Ill_scalpel_4699:HG3_Ill_Krunchall_6562:HG3_Ill_GATKHC_7859:HG3_Ill_250bpfermikitraw_6337:HG3_Ill_150bpfermikitraw_6161:HG2_Ill_svaba_6005:HG2_Ill_scalpel_4615:HG2_Ill_Krunchall_6690:HG2_Ill_GATKHC_7854:HG2_Ill_250bpfermikitraw_6557;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6104:HG2_Ill_250bpfermikitraw_6558:HG2_Ill_FB_4285:HG2_Ill_GATKHCSBGrefine_3168:HG2_Ill_GATKHC_7855:HG2_Ill_scalpel_4616:HG2_Ill_svaba_6006:HG2_PB_assemblyticsPBcR_19124:HG4_Ill_150bpfermikitraw_6318:HG4_Ill_250bpfermikitraw_6610:HG4_Ill_FB_4366:HG4_Ill_GATKHCSBGrefine_3319:HG4_Ill_GATKHC_7924:HG4_Ill_Krunchall_6955:HG4_Ill_scalpel_4528:HG4_Ill_svaba_6131;NumExactMatchSVs=16;ClusterMaxShiftDist=0.152381;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.252252;PBcalls=8;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=0;DistForward=24;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=59;REFWIDENED=4:92123906-92123964;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4085.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:65:1/1:6:28:1:23:./.:0:0:0:0:1/1:0:53:./.:.:.:.:.:.
chr4	92885118	HG4_PB_pbsv_4742	C	CATGTATTATATATAATTAATATAATATATAATATATAATATATAATTATATATAAAATATATAATAATATATTATTAAATATAATAATAATATATAATTATATATATAATATATATATATATATATATATAATATATATTAATATATATAATTATATATATTAATTCAGTATAATATGATATATATATAGTAATAAGTATATATTATATATATGTAATATATAATATATATATAATATATATAAATTATATATTATATATATATATATATTATATATT	20	PASS	ClusterIDs=HG2_PB_pbsv_4705:HG2_PB_SVrefine2Falcon2Bionano_2261:HG4_PB_assemblyticsfalcon_19332:HG4_PB_assemblyticsfalcon_19335:HG4_PB_assemblyticsfalcon_19333:HG4_PB_assemblyticsfalcon_19334:HG3_Ill_SVrefine2DISCOVARDovetail_3627:HG3_PB_pbsv_4601:HG2_PB_SVrefine2Falcon1plusDovetail_8862:HG2_PB_SVrefine2PB10Xhap12_3419:HG4_PB_pbsv_4742:HG2_PB_SVrefine2PB10Xhap12_3418:HG2_PB_SVrefine2PBcRplusDovetail_8230:HG3_PB_SVrefine2PBcRDovetail_2142;NumClusterSVs=14;ExactMatchIDs=HG4_PB_pbsv_4742;NumExactMatchSVs=1;ClusterMaxShiftDist=0.32282;ClusterMaxSizeDiff=0.32282;ClusterMaxEditDist=0.335968;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=278;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=272;REFWIDENED=4:92885121-92885392;PctSeqSimilarity=0.9222;PctSizeSimilarity=0.936;PctRecOverlap=0.404;SizeDiff=-19;StartDistance=-168;EndDistance=-168;GTMatch=1;TruScore=75;MatchId=4086.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:53:./.:2:25:0:4:./.:0:0:0:0:0/1:16:3:./.:.:.:.:.:.
chr4	97423310	HG2_PB_SVrefine2Falcon2Bionano_2271	T	TACAGCTAAGATTCCACAAGCACAGGCAACAAAACTGAAAAACGAAAATTGGGTCCATATTAACCTGAAAAACTTCTACCCAGAAAAGGAAACAATCAACAGAGTGAAGTGACAGCCTGTAGAATAGGAGTAAATATTTGCAAATTATTTATCCAACAAGGAGCAAATATGCAGAATATGCAAATAACGCAAACAACTCAACAGGAAAAATAAATAATTCTATTAGATAGTGGGCAAAGAAACCGAATCGACATTCTTCAAAAGAAAATATGTAGGCTGCGCACAATGGCTCATGCCTGTAATCTCAGCACTTTGGGAGGCTGAAGCAGGAGGATCTCTCCAGCCCAGGACTTCAAAACTAGGCTGGGCAACACAGTGAAACCTTGTCTCTACAAAAAATAAAAAAAATGTAGCCAGATGTGGTGGTGTACACCTGTGGTCCCAGCTACTCAGGAGCTTGAGGTAGGAAGATCGCTTGAACTTTGGAGATCAAGGCTGCAGTGAGCTATGATCATCCCACTGCACTCCAGCCTGGGCAACAGAGCAGGACCATGTCTCAAAAAAAGCTATAGAATGGCCAATAAATATATGAAAAAAATAGTGCAACATCATTAATCATCAGGAAAATGCAGATCAAAATCACATGAGATACCATCTCACCCCAGATAGAGTGGCTATTATCAAAAAGACAAAGAATAACAAATGTTGGCTATCATGTGGAAAAAAGAAAACTTTTATACACAGTTGTTGGGAATGTAAATTAGTACAGCATTCATGGAATACAGCATGGAGTTTTCTCAAAAAAACAAAAAATGTAAAAGCTAAGAAAATGTGGTATATATAAACAATGGAATACTATTCGGCCATAAAAAAGAATGGAATCCTGTCATTTGTGGCAACAAGGGTGAGCTTGGAGTCATTACGTTAAGGACAGTAAGTGAGGCACAGAAATATAAATACTGCTTCTTCTCACTCATATGTGGAAGCTAAAAAAATTAATTTGAGTTCATGGAAGTAGGGAGTAGATTTGTGGGTATTAAAGGTAGGGAATGGGAGAAGAGAGGAATATGAAACAAAGTTGCTTTATGAATACAAAATTGCTGCTAGATAGGAGGAATGAATTTTGGTGTTCTGAAGCAATGTAGAGTGAATATGATTAGCTATAATTTATTGTATATTTTCAAAAGGCTGGAGGAGAGGATTTAAAACATTCACAACACAAAGAAATGATAAATATTTGAGGTGATGTATGTGCTAGTTACCCAGACTTGATCGTTATACGTTGTATAAATGCATACAAAATTTCTCACTGTATCCCATATTTATATAAAATTATTACGTGTCATCTAAAATAAAAGAGTAAAAAGAATGTAGAGAGAGGTAGATAAGAAGAAAAATAAAAATCTATAGAATCTGCTTAAATTAAGGCACCAGGACATGAGGCATGACATGTAAATAGAAGAAGCTGTAACGAATTGATAAACAGAAGGTCTGGACAATATAAGGCCAGGAAAGCCAAGGAAGACTATTTCAAAGAGGAGCTAAAAGCCAATAATGTTAAATGGTACAGAGACTTCAAGGTACATAGAATCTGGAAAGGGCACTTTAGTGATTAGAAAGCGTTTAGTAATCTTCAACTTTTACTGAGGTGATTGAAGTGGCATGAAAAACACCAAGTAACTTTATTACTTGAGAATGAGGAAATGGAGATGCAAGAGATGTTGATAAATTTTACTTCTGAATTTTGGCAAGTTATAATTTAAGATAAGGACAGTAACACTAAGGTACTAAAAAGTTTATTGTTATAATTAGATGGGAAATGGATAAAAATGAGAGAAAAAAAGAGTTAAAGATCTTGAGTTTTTGCATTAAAAAAATGTCACAGTTGATAAATACTAATGCTTTGCTTTGCTAGTGAGTGACATTCTTAGCACAATGGCATTTTAAAACAATAGGCTGTTTTGCAAAAACCTTGGGTTTCTTTGTTCAAAATGTCAAGGGCCTTTTCAACTCTTTCGAAAAATCTCTGGAAGTTATAAGATTTAGGAGTCTATGATAGCCTTAACAGGGTAATAACATTTTTTTCTTTTAGTGTTCTTGCTGTTTATACATACATGTATAGTTTTTTGATTTTTTTTAGTTTTTGAAGAGTACATTTAAATAGGTTTGTAATTATGAGAGGAAGAGTTTGAAGATCTCAGTGTAAAGAAATAAGTACATGAAATTTCTGAAAGGACAAGAAAGCATAGAATAAAAGAAGGATTCATTTTGGAAATTTAAAAGAAAGTGGCAGCATTCTTCTACCCAGAAAAAATAAAAAATAAAACTTCTTCCCAGTACTCCCCTAGATTCTTTTTTCATGTTGCTTCTTATCTTTTTGCCACCTCTTATCACCACTTTTAAAATAACTCAATACTCTGATTAAGACAGCCAGGTGGGAGAAGGTCCCTGGAAAAACTCTAATGGGCCTGTGCACTGGGAAGAGTGCACACTGGGGTGGAACTTCAGTTCATGTCCTTTGCATTGAGGAGGAGTCTGGCCTCTCCTCTTCCTGTGTGGAACCTGGAACTCAAGCAGCGGGAGGGAAGTGCTCTAGCAAGGACTCTGGCCTTGCGGAGGATCCCCTTTACCTCCGACCTTTTTTCCCCTTTTCACCCAATAAAACCCTGGTTTACTCACCCTTCAAACTCTCTGCGAGCTAGAATTTCCATGGCCCTGAGATGGCCAAGGACCCCGTCTTTAGCTGAACTAAGGAATAGCCCTGCAACAAAATCATGGTCCATATCACACCTTTTTTCCTACTACTCAGCACAGATATCCATATCCCTTATTTCTTACAGAACTGTATGGCAAAACCACAATTACTTTTACACCAACCTAAGTAAGTTTCCCTGCCTGTCTTTGTGAGCTATTGCTGCATAATGAAACACCCCCAAAACACAGTGGCAGGCAGCAATATTCAATTATTCCCATGCACACATGTCTGTAGGTCAGCTATAGCTATTCTAAAGACTCATTAGAAAGGCTGCTTATGTATGGATCAGCTGGGGCTGCTCTGTGCCATATGTCACATTCAAGAATCTAGGCTGGAGATGCAGAAGTTACCTGAGCCATGGTTTTCTCATCATAGAGATCAGAATCTACAAGGGGAGCCTGCAGAAATGTGATGGCTCTTAAGGTATGCATTTGGATTTTGCATTCTATTATTTCCATTGCCAGTTCAATTGACCAAAGCAGGCCTTAGGGCCAAATCCATAATCAATGAGCTTAGAAGTATACTTTACCCATAGTAGGAGGTAGAGAGTGAATATTTGCTGAACAATCATCTAACAATCGAAATCTACTCTTTTCTTCACAGATATTTCATATATCCTCCTGCATGCTACATGCACGTAGTCCTATTCCAAGTCCACTAATACATTTATCTATTACAGCAGCATCACACTTTAAGACAAAAATATCATGGGCATGTTATCCAGGTGCAGATCCTCTTGATATGGAGGTTTATGAACTATAAAAAGACAAATAATCTCTCCACATTGCCAATGTCCAATAGAGAAACAAGGAAAGAATCTATAGTAAACATTTTCATTTCGTAACAAGGATAGGAGGTAGAAGAAGTTGATAGTCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_22768:HG2_PB_pbsv_4724:HG4_PB_pbsv_4757:HG2_PB_assemblyticsfalcon_19811:HG3_PB_pbsv_4618:HG4_PB_assemblyticsfalcon_19371:HG2_PB_assemblyticsPBcR_19167:HG4_PB_SVrefine2PBcRDovetail_2417:HG2_PB_SVrefine2Falcon1plusDovetail_8875:HG4_PB_SVrefine2Falcon1Dovetail_2894:HG4_Ill_SVrefine2DISCOVARDovetail_3621:HG3_PB_SVrefine2PBcRDovetail_2154:HG3_Ill_SVrefine2DISCOVARDovetail_3648:HG2_PB_SVrefine2PBcRplusDovetail_8243:HG2_PB_SVrefine2PB10Xhap12_3433:HG2_PB_SVrefine2Falcon2Bionano_2271:HG2_Ill_SVrefine2DISCOVARplusDovetail_9621:HG2_10X_SVrefine210Xhap12_3471:HG3_PB_SVrefine2Falcon1Dovetail_2922:HG2_Ill_breakscan11_3464:HG2_PB_PB10Xdip_22769;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2271:HG2_PB_SVrefine2PB10Xhap12_3433:HG2_PB_SVrefine2PBcRplusDovetail_8243:HG3_Ill_SVrefine2DISCOVARDovetail_3648:HG3_PB_SVrefine2PBcRDovetail_2154:HG4_Ill_SVrefine2DISCOVARDovetail_3621;NumExactMatchSVs=6;ClusterMaxShiftDist=0.040855;ClusterMaxSizeDiff=0.040855;ClusterMaxEditDist=0.225153;PBcalls=16;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=3630;DistBack=127425;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=4:97423311-97423313;PctSeqSimilarity=0.9999;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4087.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:97:./.:0:1:0:1:./.:0:0:0:0:1/1:0:21:1/1:2:455:.:3662:.
chr4	97727782	HG2_Ill_SVrefine2DISCOVARplusDovetail_9623	AAATATTATA	GGCATATTTTAATTGGTGTTGTCTAGCTCAGAATGTTTTAACCTTAGCCACCAGAATTTTTCCCCTTTAAGGGCACACCAAAGCAAAGAGCCTCCCTTTCTGGGCCCACAAAGACATGCACAATCAGGTTGGTGGCAGAAGTGGGGCAGCTTTCCCAGATACCTGAGTATTTGAAAAATAAATGATGCTTCAGGAATGACATTGTGCTGGGTGTCTCCTTCTGGGTATTTAACAGGGATATGAGTATCTGCCTTTTGGGTGGTAGTAGAAAGGACTGCTTCACCGCGGCAATACACACTTCTAACAGAGGAAGTCCTTTCAAAGGGACACTACACAGCTGCAATCCCCAAATATCTTTCGTGGAATAGCAGTTGCATAAGATGTTTTATTCTTTAAGTATATCTGGATCCCTTACATATGTCAGGAGCTACATAAATTAACTGTGTTACTTAAGAAGAGGATTCAGATGGAAACTGTTATAGTTCTGAATCTTATTTCAGAAACTCTAGTGTAAAAGAAGGATTATATTAAATTACTTTAAATATCAACCCAATTGAATTTGGAGCTACACATTGTGCTAGTTTAGCAGGAAATTCAACATTAGCCTTATCAGTGTTTCTCTGCTGCTTGCTTATAAACTCAGGTTGCAGAAGAACACTAGAGACTAAGATGAGTGCTGGGATATGTGTGGGGAGTATTGCTCATAGACAGTCCATCATGGCAACTCCTGGCCTCTTCACTGTCTCAGCTCACAAGGCTCCCAGTGGCAGGCTGCCCCGTGGCTTTTGTGCCAACCTTGGGCCACATGAGTTTTAATTTTTCTAATGATTAAAGCCCTAGGACTTAGGCTCCCCACATGCAGCCTCTACCCTCTGGATTTTGTCATCTGTCGAGGGTAAAGTCAGCAATTGAGATATGTATTCCTATCAAAACCAAGAACTGCTGATTTCAGGTCTGATTCTCAGTCTAGAAAAATGTCTCATTTATATCTGTTCCAAACTCTTTCTTGTACCTTTAGGACACTTACCATCTTTCTTTCAATAACCTTATGCTTTCACAAAGAGAAAAATAGAGAAAGCGATCATATGAAGCATCTTCTGCTTTGAGCCAAGAAACCAAGAAAAAAGAAATGAGAAAAGATCTGGATACTTGCCTGAATGATATGAAGAAGACACAGCAGTAAATTAAAAATGAGATTAAAACCACAATAAATTATTCTGTCATCAAAATCAAATACATTCTTTTTGTAGTATTCCTTAGAGTTTAGCCTATGCCTGTGTATCATTAATCCAAGCAAGGGATATAATATATAGTGTTTCCCAAGCATCTTTGTCCATAAACACTGTCTTTTTGTTCTCTGAAGAGTGTCTTTCAAGAACTACTTTGAAAAATGCTTCTCTTAGGAAACATTCTTACTGTTAAAACTTCTAAGATTCTTAACATTTGGGTTTCCTAAACTTCGTAGCTTTCCCACCTGCTTCCTCTCCCAGGAAGTATAAAGGAGAATGGCTTGTTACGTGATGCCTTGAAAGGCTTATTTCTATATTCTTTTATATTTAAAAAGGAGATGGAGGCCAGGCACAGTGGCTCATGTGTGTAATCCCAGCGCTCTGGGAGGTCAAGGTGGGAGGATCCCTTGAGCCCTGGAGGTAGATGCTGCAGTGAGCCGTGATGGTGCCACTGAACTCCATCCTGGGCGGCGGAGTGAGACCTTGACTCAAAAAAAGAAAAAGAAAAAAAAAAGG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2924:HG4_PB_assemblyticsfalcon_19374:HG2_PB_assemblyticsfalcon_19815:HG3_PB_pbsv_4620:HG2_PB_pbsv_4726:HG4_PB_SVrefine2Falcon1Dovetail_2896:HG2_PB_SVrefine2Falcon1plusDovetail_8877:HG4_Ill_SVrefine2DISCOVARDovetail_3623:HG2_PB_assemblyticsPBcR_19171:HG2_PB_SVrefine2PBcRplusDovetail_8245:HG2_PB_SVrefine2Falcon2Bionano_2273:HG2_Ill_SVrefine2DISCOVARplusDovetail_9623:HG2_10X_SVrefine210Xhap12_3473:HG4_Ill_Spiral_389:HG2_PB_SVrefine2PB10Xhap12_3435:HG2_PB_PB10Xdip_22770;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3473:HG2_Ill_SVrefine2DISCOVARplusDovetail_9623:HG2_PB_SVrefine2Falcon2Bionano_2273:HG2_PB_SVrefine2PBcRplusDovetail_8245:HG2_PB_assemblyticsPBcR_19171;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0641863;ClusterMaxSizeDiff=0.0636183;ClusterMaxEditDist=0.190371;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=1735;DistBack=-1;DistForward=6;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:97727792-97727781;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9994;PctRecOverlap=0.9948;SizeDiff=1;StartDistance=-9;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4088.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:43:0|1:28:0:1:33:./.:0:0:0:0:0/1:35:18:0/1:68:101:.:1604:.
chr4	98470164	HG2_Ill_GATKHCSBGrefine_3191	A	ATGAGATACTAGTATGGTACACAACTTCTATTATCAGATTCTGAGAAACCTCTGTCTCTATTAAAAACAGAATTCAATAAAGAGAGTCAGGTAGATGAATAAGCATGTGAAATGAGCCTGTGGCAAGAGGTGCATGATGTGCTCAAAGGAACTGAAAGAGACTTTAGAGTACAGAAAACAGGAGGATAGATGAAGGGAAAGTGAGCTAGGAACCACTAGAAGACATTACGTTTGTCCACAGTCAGTTGCCTCTGTGGACAAATTGACTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3481:HG4_PB_pbsv_4766:HG4_PB_assemblyticsfalcon_19377:HG2_PB_pbsv_4733:HG3_PB_pbsv_4624:HG2_PB_assemblyticsfalcon_19823:HG2_PB_assemblyticsPBcR_19183:HG2_Ill_breakscan11_3465:HG2_PB_PB10Xdip_22781:HG2_PB_PB10Xdip_22780:HG4_PB_HySA_7083:HG3_PB_HySA_7292:HG2_PB_SVrefine2Falcon1plusDovetail_8883:HG4_PB_SVrefine2PBcRDovetail_2424:HG4_PB_SVrefine2Falcon1Dovetail_2901:HG4_Ill_svaba_6176:HG4_Ill_SVrefine2DISCOVARDovetail_3627:HG4_Ill_MetaSV_3831:HG4_Ill_GATKHCSBGrefine_3337:HG4_Ill_Cortex_2693:HG3_PB_SVrefine2PBcRDovetail_2158:HG3_PB_SVrefine2Falcon1Dovetail_2930:HG3_Ill_svaba_6177:HG3_Ill_SVrefine2DISCOVARDovetail_3655:HG3_Ill_MetaSV_3821:HG3_Ill_GATKHCSBGrefine_3171:HG3_Ill_Cortex_2709:HG2_PB_SVrefine2PBcRplusDovetail_8252:HG2_PB_SVrefine2PB10Xhap12_3444:HG2_PB_SVrefine2Falcon2Bionano_2279:HG2_Ill_svaba_6054:HG2_Ill_manta_1327:HG2_Ill_SVrefine2DISCOVARplusDovetail_9626:HG2_Ill_MetaSV_3650:HG2_Ill_GATKHCSBGrefine_3191:HG2_Ill_Cortex_6410;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3481:HG4_PB_SVrefine2PBcRDovetail_2424:HG4_PB_SVrefine2Falcon1Dovetail_2901:HG4_Ill_svaba_6176:HG4_Ill_SVrefine2DISCOVARDovetail_3627:HG4_Ill_MetaSV_3831:HG4_Ill_GATKHCSBGrefine_3337:HG4_Ill_Cortex_2693:HG3_PB_SVrefine2PBcRDovetail_2158:HG3_PB_SVrefine2Falcon1Dovetail_2930:HG3_Ill_svaba_6177:HG3_Ill_SVrefine2DISCOVARDovetail_3655:HG3_Ill_MetaSV_3821:HG3_Ill_GATKHCSBGrefine_3171:HG3_Ill_Cortex_2709:HG2_PB_SVrefine2PBcRplusDovetail_8252:HG2_PB_SVrefine2PB10Xhap12_3444:HG2_PB_SVrefine2Falcon2Bionano_2279:HG2_Ill_svaba_6054:HG2_Ill_manta_1327:HG2_Ill_SVrefine2DISCOVARplusDovetail_9626:HG2_Ill_MetaSV_3650:HG2_Ill_GATKHCSBGrefine_3191:HG2_Ill_Cortex_6410;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0915751;ClusterMaxSizeDiff=0.0879121;ClusterMaxEditDist=0.231729;PBcalls=18;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=268;DistBack=42993;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=4:98470165-98470169;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4089.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:90:1/1:1:30:0:18:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr4	98960559	HG2_Ill_manta_1329	A	ATCCAGTAAAAATGTACAAGGTGTGCTGGAAGATATATCCTAAATTTTTTTATTTGTATAATTTTAAGGGGTACAAGAGCAGTTTTGTTACATGGATATATTGCACAGTGGTGAAGACGGGGTTTTTAGTGTAACCGTCACCCAAATGTACATTGTACCCATTAGTAATTTCTCATTCCTTACCCCTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3483:HG2_PB_pbsv_4735:HG4_PB_pbsv_4768:HG2_PB_assemblyticsfalcon_19828:HG2_Ill_breakscan11_3466:HG2_PB_SVrefine2Falcon1plusDovetail_8885:HG4_Ill_manta_1180:HG4_Ill_MetaSV_3833:HG4_Ill_GATKHCSBGrefine_3339:HG2_PB_SVrefine2Falcon2Bionano_2281:HG2_Ill_manta_1329:HG2_Ill_SpiralSDKrefine_12506:HG2_Ill_SVrefine2DISCOVARplusDovetail_9628:HG2_Ill_MetaSV_3652:HG2_Ill_GATKHCSBGrefine_3193;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3483:HG4_Ill_manta_1180:HG4_Ill_MetaSV_3833:HG4_Ill_GATKHCSBGrefine_3339:HG2_PB_SVrefine2Falcon2Bionano_2281:HG2_Ill_manta_1329:HG2_Ill_SpiralSDKrefine_12506:HG2_Ill_SVrefine2DISCOVARplusDovetail_9628:HG2_Ill_MetaSV_3652:HG2_Ill_GATKHCSBGrefine_3193;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0531915;ClusterMaxSizeDiff=0.0474934;ClusterMaxEditDist=0.181818;PBcalls=5;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=187;DistBack=30874;DistForward=6581;DistMin=6581;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=4:98960560-98960562;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4090.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:46:14:0|1:45:0:0:14:./.:0:0:0:0:0/1:24:12:./.:.:.:.:.:.
chr4	98967141	HG2_Ill_Krunchall_6751	A	ATATTGTTCTGCTGAGTAGTATCCATAAGTCCCTTAAGTGATCTTCATAGTTTTTT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6159:HG2_Ill_MetaSV_3653:HG4_Ill_manta_1181:HG4_PB_pbsv_4769:HG4_Ill_GATKHC_7986:HG2_PB_pbsv_4736:HG4_Ill_GATKHCSBGrefine_3340:HG4_Ill_250bpfermikitraw_6668:HG4_Ill_150bpfermikitraw_6373:HG2_PB_assemblyticsfalcon_19829:HG2_Ill_SpiralSDKrefine_12507:HG2_Ill_Krunchall_6751:HG2_Ill_GATKHC_7921:HG2_Ill_GATKHCSBGrefine_3194;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6159:HG4_Ill_manta_1181:HG4_Ill_GATKHC_7986:HG4_Ill_GATKHCSBGrefine_3340:HG4_Ill_250bpfermikitraw_6668:HG4_Ill_150bpfermikitraw_6373:HG2_PB_assemblyticsfalcon_19829:HG2_Ill_SpiralSDKrefine_12507:HG2_Ill_Krunchall_6751:HG2_Ill_GATKHC_7921:HG2_Ill_GATKHCSBGrefine_3194;NumExactMatchSVs=11;ClusterMaxShiftDist=0.103448;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.344828;PBcalls=3;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=55;DistBack=6581;DistForward=26580;DistMin=6581;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=59;REFWIDENED=4:98967142-98967200;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4091.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:24:0|1:46:5:2:17:./.:0:0:0:0:0/1:15:10:./.:.:.:.:.:.
chr4	100100714	HG4_Ill_manta_1184	A	ATGTTCCTTGATGTGGTAAACTTCTCCTTCCTCTAGGAGTAGAAGTCCCTGTGAATGCTGTTGCTCCAAT	20	PASS	ClusterIDs=HG4_PB_pbsv_4774:HG4_Ill_Cortex_2694:HG3_Ill_Cortex_2710:HG2_Ill_Cortex_6415:HG3_PB_pbsv_4629:HG2_PB_pbsv_4739:HG2_PB_PB10Xdip_21171:HG4_PB_assemblyticsfalcon_19390:HG4_Ill_svaba_6188:HG4_Ill_manta_1184:HG4_Ill_Krunchall_7027:HG4_Ill_GATKHC_7994:HG4_Ill_GATKHCSBGrefine_3343:HG4_Ill_250bpfermikitraw_6673:HG4_Ill_150bpfermikitraw_6378:HG3_Ill_svaba_6187:HG3_Ill_manta_1096:HG3_Ill_Spiral_5182:HG3_Ill_Krunchall_6631:HG3_Ill_GATKHC_7935:HG3_Ill_GATKHCSBGrefine_3175:HG3_Ill_250bpfermikitraw_6399:HG3_Ill_150bpfermikitraw_6227:HG2_PB_assemblyticsfalcon_19836:HG2_Ill_svaba_6065:HG2_Ill_manta_1332:HG2_Ill_SpiralSDKrefine_12512:HG2_Ill_Krunchall_6758:HG2_Ill_GATKHC_7930:HG2_Ill_GATKHCSBGrefine_3198:HG2_Ill_250bpfermikitraw_6623:HG2_Ill_150bpfermikitraw_6165;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6165:HG2_Ill_250bpfermikitraw_6623:HG2_Ill_GATKHCSBGrefine_3198:HG2_Ill_GATKHC_7930:HG2_Ill_Krunchall_6758:HG2_Ill_SpiralSDKrefine_12512:HG2_Ill_manta_1332:HG2_Ill_svaba_6065:HG2_PB_assemblyticsfalcon_19836:HG3_Ill_150bpfermikitraw_6227:HG3_Ill_250bpfermikitraw_6399:HG3_Ill_GATKHCSBGrefine_3175:HG3_Ill_GATKHC_7935:HG3_Ill_Krunchall_6631:HG3_Ill_Spiral_5182:HG3_Ill_manta_1096:HG3_Ill_svaba_6187:HG4_Ill_150bpfermikitraw_6378:HG4_Ill_250bpfermikitraw_6673:HG4_Ill_GATKHCSBGrefine_3343:HG4_Ill_GATKHC_7994:HG4_Ill_Krunchall_7027:HG4_Ill_manta_1184:HG4_Ill_svaba_6188:HG4_PB_assemblyticsfalcon_19390;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.265734;PBcalls=6;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=22731;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:100100713-100100715;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4093.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:./.:0:4:0:5:./.:0:0:0:0:1/1:0:62:./.:.:.:.:.:.
chr4	100509861	HG2_PB_SVrefine2Falcon1plusDovetail_8888	T	TATATATATATTTCATATATATACACACATATATATATGTTCATATATATACACACATATATATATGTTCATATATATACACACATATATATATGTTCATATATATACACACATATATATATGTTCATATATATACACACATATATATATGTTCATATATATACACACATATATATGTTCATATATATACACACATATATATGTTCATATATATACACACATATATATGTTCATATATATACACACATATATATATGTTCATATATTCATATACACAATATATGTTCATATATATACATCATATATATGTTCATATATATATTCATATATATGTTCATATATATTCATATATATGTTCATATATATATTCATATATATGTTCATATATATATTCATATATATATGTTCATATATATATTCATATATATATGTTCATATATATATTCATATATATATGTTCATATATATATTCATATATATATGTTCATATATATATTCATATATATGTTCATATATATATTCATATATATATGTTCATATATATATTC	20	PASS	ClusterIDs=HG4_PB_pbsv_4776:HG2_PB_SVrefine2PBcRplusDovetail_8257:HG2_PB_HySA_8904:HG2_PB_SVrefine2PB10Xhap12_3450:HG3_PB_SVrefine2PBcRDovetail_2166:HG2_PB_pbsv_4740:HG3_Ill_SVrefine2DISCOVARDovetail_3663:HG4_PB_SVrefine2Falcon1Dovetail_2907:HG3_PB_SVrefine2Falcon1Dovetail_2936:HG2_PB_SVrefine2Falcon1plusDovetail_8888:HG2_PB_SVrefine2Falcon2Bionano_2285:HG4_PB_SVrefine2PBcRDovetail_2430;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8888;NumExactMatchSVs=1;ClusterMaxShiftDist=0.198165;ClusterMaxSizeDiff=0.198165;ClusterMaxEditDist=0.353448;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=547;DistBack=-183;DistForward=-1;DistMin=-183;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=364;REFWIDENED=4:100509862-100510225;PctSeqSimilarity=0.9399;PctSizeSimilarity=0.9464;PctRecOverlap=0.494;SizeDiff=-31;StartDistance=-277;EndDistance=-277;GTMatch=1;TruScore=79;MatchId=4094.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:113:1/1:5:33:0:43:./.:0:0:0:0:0/1:14:11:0/1:13:64:.:.:.
chr4	102085248	HG2_10X_SVrefine210Xhap12_3496	T	TCGCACCTCAGCCTCCTGACCAGCTGGGATTACAGACATTCACCACAGAGCCTGGCTAATTTTTTTGTAGAGACAGGGTCTTACTTTGTTGCCCAGGCTGGTCTCAAACTCCTAGCTTCAAGCGATCTGCCTGCCCTAGCCTCTCAAAGTGCTGGGATTACAAGTGTGAGCTACTGTGCCTGGCCACATGACAGAGTTCTAGTATCTGTAATTTCACATCCAGGCCTTCATTCTCTCCACCTATAAACGTCCACTGGAACACAATTGGAAGAAAATATTGGTAAAAACGTTGTTCCTTTCATGAGCAGCATAAGCAGTATGTTATATAATTTAATCTAATTCAGCGTTAATAAATACTCAAGTTTAAATTTTACCAAAACAAACCCATTAATTACAAATGAAGTAACCCAAGGTTTATAGGATGACAGACTCTTAGCAATACTATGAAAGAAACCACAATAAGGTATACTGCCTTCAGCCTGCTCACTCTGAGTCACACTTGCCTCCTTGATGTTGTAATATTTCTTTCTGGGAGCCAAGCTCCAGCTGTTCACA	20	PASS	ClusterIDs=HG2_PB_pbsv_4748:HG3_PB_pbsv_4641:HG2_PB_assemblyticsfalcon_19848:HG4_Ill_MetaSV_3839:HG4_Ill_GATKHCSBGrefine_3350:HG3_PB_SVrefine2Falcon1Dovetail_2942:HG3_Ill_SVrefine2DISCOVARDovetail_3673:HG3_Ill_MetaSV_3828:HG3_Ill_GATKHCSBGrefine_3189:HG2_PB_SVrefine2PBcRplusDovetail_8262:HG2_PB_SVrefine2PB10Xhap12_3455:HG2_PB_SVrefine2Falcon2Bionano_2289:HG2_PB_SVrefine2Falcon1plusDovetail_8892:HG2_Ill_SVrefine2DISCOVARplusDovetail_9641:HG2_Ill_MetaSV_3658:HG2_Ill_GATKHCSBGrefine_3208:HG2_10X_SVrefine210Xhap12_3496:HG2_PB_PB10Xdip_21186:HG2_Ill_breakscan11_3469:HG4_PB_pbsv_4783:HG4_PB_HySA_7115;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3496:HG2_Ill_GATKHCSBGrefine_3208:HG2_Ill_MetaSV_3658:HG2_Ill_SVrefine2DISCOVARplusDovetail_9641:HG2_PB_SVrefine2Falcon1plusDovetail_8892:HG2_PB_SVrefine2Falcon2Bionano_2289:HG2_PB_SVrefine2PB10Xhap12_3455:HG2_PB_SVrefine2PBcRplusDovetail_8262:HG3_Ill_GATKHCSBGrefine_3189:HG3_Ill_MetaSV_3828:HG3_Ill_SVrefine2DISCOVARDovetail_3673:HG3_PB_SVrefine2Falcon1Dovetail_2942:HG4_Ill_GATKHCSBGrefine_3350:HG4_Ill_MetaSV_3839;NumExactMatchSVs=14;ClusterMaxShiftDist=0.125217;ClusterMaxSizeDiff=0.125217;ClusterMaxEditDist=0.251477;PBcalls=11;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=554;DistBack=-1;DistForward=112886;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:102085249-102085249;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4095.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:89:1/1:3:26:0:24:./.:0:0:0:0:1/1:0:18:1/1:3:76:.:.:.
chr4	103118574	HG2_PB_PB10Xdip_21193	TGATCCAAA	TGATCCAGGCCGGGTGGCTACGCTGTAATCCAGCACTTGGGAGGCGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATGATCCAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2913:HG2_PB_HySA_8938:HG2_PB_pbsv_4754:HG2_PB_PB10Xdip_21193:HG2_PB_HySA_8937:HG3_PB_pbsv_4644:HG2_Ill_breakscan11_3470:HG2_PB_SVrefine2PB10Xhap12_3461:HG2_PB_SVrefine2PBcRplusDovetail_8266:HG3_PB_SVrefine2Falcon1Dovetail_2946:HG2_PB_SVrefine2Falcon1plusDovetail_8894:HG3_PB_HySA_7324;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_21193:HG2_PB_SVrefine2PB10Xhap12_3461;NumExactMatchSVs=2;ClusterMaxShiftDist=0.178988;ClusterMaxSizeDiff=0.132296;ClusterMaxEditDist=0.225681;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=119;DistBack=6;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=4:103118568-103118580;PctSeqSimilarity=0.9441;PctSizeSimilarity=0.8815;PctRecOverlap=0.8889;SizeDiff=-16;StartDistance=7;EndDistance=15;GTMatch=0;TruScore=90;MatchId=4096.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:39:0|1:15:3:1:35:./.:0:0:0:0:0/1:16:9:./.:.:.:.:.:.
chr4	103133339	HG2_Ill_MetaSV_3661	C	CAAAGGTCCTACAAGATGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAATAAAATAAAATAAAAT	20	PASS	ClusterIDs=HG2_PB_HySA_8939:HG2_PB_pbsv_4755:HG2_PB_PB10Xdip_21194:HG2_PB_SVrefine2PB10Xhap12_3462:HG3_PB_HySA_7325:HG3_PB_pbsv_4645:HG2_Ill_breakscan11_3471:HG3_PB_SVrefine2Falcon1Dovetail_2947:HG2_PB_SVrefine2Falcon1plusDovetail_8895:HG3_Ill_MetaSV_3829:HG3_Ill_GATKHCSBGrefine_3190:HG2_Ill_MetaSV_3661:HG2_Ill_GATKHCSBGrefine_3211:HG3_PB_SVrefine2PBcRDovetail_2173;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3211:HG2_Ill_MetaSV_3661:HG3_Ill_GATKHCSBGrefine_3190:HG3_Ill_MetaSV_3829;NumExactMatchSVs=4;ClusterMaxShiftDist=0.141066;ClusterMaxSizeDiff=0.137931;ClusterMaxEditDist=0.206897;PBcalls=9;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=-1;DistForward=17;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=4:103133340-103133356;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4097.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:42:0|1:16:2:0:32:./.:0:0:0:0:0/1:36:10:0/1:5:26:.:.:.
chr4	103343745	HG4_PB_SVrefine2PBcRDovetail_2437	T	TACAAGATCAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTATAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAGAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAGAATACTATGTATCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_21200:HG4_PB_assemblyticsfalcon_19414:HG4_PB_pbsv_4791:HG4_PB_HySA_7124:HG2_PB_pbsv_4759:HG2_PB_HySA_8950:HG4_PB_SVrefine2Falcon1Dovetail_2915:HG4_PB_SVrefine2PBcRDovetail_2437:HG2_PB_SVrefine2PB10Xhap12_3466:HG2_PB_SVrefine2PBcRplusDovetail_8270:HG2_PB_SVrefine2Falcon2Bionano_2293:HG2_Ill_breakscan11_3472;NumClusterSVs=12;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_2437;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0385016;ClusterMaxSizeDiff=0.0385016;ClusterMaxEditDist=0.217267;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1898;DistBack=8816;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=4:103343746-103343756;PctSeqSimilarity=0.9995;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4098.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:53:./.:4:17:12:4:./.:0:0:0:0:0/1:23:11:0/1:66:276:.:.:.
chr4	103785525	HG4_Ill_GATKHCSBGrefine_3353	T	TAAAAATTTATTGGCTGATGAAATCTAAAAGCCTGGAAATCATCAATTTATAGGGCCAGTAAAGAACAAAAAAAATTAAAATTTGAGAAGTAACTGATGGAGCAAGGTCTTAAAGGGATTCAGCTCTAGAATACAGGGAGCAGTTAGATTTGGAGAACAGAACAAAAGCTAAATATAGAAGGGATTATGACCAAGTAGAGATGATGGTGAGAAAAGCTTCTCTAGTAACTAAAAATCAAGGTCATCTGAGCTCAAAATAAGCCTGGTAATGTTAATAGAAGACATAATTATTAATATAAAATAGTGAAGATTTGAACAACTTTTGTCAGGAATGAGAAAAATAAATAA	20	PASS	ClusterIDs=HG2_PB_pbsv_4760:HG4_Ill_Spiral_393:HG2_Ill_Spiral_336:HG2_PB_HySA_8954:HG4_PB_HySA_7127:HG4_PB_pbsv_4793:HG4_Ill_SVrefine2DISCOVARDovetail_3650:HG4_Ill_MetaSV_3842:HG4_Ill_GATKHCSBGrefine_3353:HG4_Ill_Cortex_2701:HG2_Ill_SVrefine2DISCOVARplusDovetail_9649:HG2_Ill_MetaSV_3663:HG2_Ill_GATKHCSBGrefine_3212:HG2_Ill_Cortex_6428:HG2_10X_SVrefine210Xhap12_3504:HG2_PB_SVrefine2Falcon1plusDovetail_8897:HG2_PB_assemblyticsfalcon_19858:HG4_PB_SVrefine2PBcRDovetail_2438;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3504:HG2_Ill_Cortex_6428:HG2_Ill_GATKHCSBGrefine_3212:HG2_Ill_MetaSV_3663:HG2_Ill_SVrefine2DISCOVARplusDovetail_9649:HG4_Ill_Cortex_2701:HG4_Ill_GATKHCSBGrefine_3353:HG4_Ill_MetaSV_3842:HG4_Ill_SVrefine2DISCOVARDovetail_3650;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0508475;ClusterMaxSizeDiff=0.0508475;ClusterMaxEditDist=0.136111;PBcalls=7;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=347;DistBack=21423;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:103785526-103785526;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4099.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:0|1:21:0:0:21:./.:0:0:0:0:0/1:32:17:0/1:11:17:.:.:.
chr4	104094707	HG2_PB_SVrefine2Falcon2Bionano_2295	C	CAATATTTGCAAAATATTTGCAATATTTGCAGAAATATTTGCAAAATATTTGCAATATTTGCAGA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_6656:HG4_PB_pbsv_4797:HG4_PB_HySA_7129:HG2_PB_pbsv_4764:HG4_Ill_SVrefine2DISCOVARDovetail_3656:HG4_Ill_Krunchall_7060:HG4_Ill_250bpfermikitraw_6706:HG2_PB_SVrefine2Falcon2Bionano_2295:HG2_Ill_SVrefine2DISCOVARplusDovetail_9654:HG2_Ill_Krunchall_6787;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6656:HG4_Ill_SVrefine2DISCOVARDovetail_3656:HG4_Ill_Krunchall_7060:HG4_Ill_250bpfermikitraw_6706:HG2_PB_SVrefine2Falcon2Bionano_2295:HG2_Ill_SVrefine2DISCOVARplusDovetail_9654:HG2_Ill_Krunchall_6787;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0916031;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.175182;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=34388;DistForward=83815;DistMin=34388;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=80;REFWIDENED=4:104094708-104094787;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:19:0|1:23:3:0:15:./.:0:0:0:0:0/1:22:27:./.:.:.:.:.:.
chr4	104358717	HG2_Ill_Krunchall_6788	G	GTATATATATATGAGTATATATATGAGTATATATATGAGAATATATATGAGTA	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_19800:HG3_Ill_svaba_6215:HG2_PB_pbsv_4765:HG3_PB_HySA_7334:HG4_PB_HySA_7131:HG4_Ill_scalpel_4592:HG4_PB_pbsv_4798:HG4_Ill_manta_1190:HG4_Ill_Krunchall_7062:HG4_Ill_GATKHC_8028:HG4_Ill_GATKHCSBGrefine_3359:HG4_Ill_250bpfermikitraw_6708:HG4_Ill_150bpfermikitraw_6405:HG2_Ill_scalpel_4685:HG2_Ill_manta_1340:HG2_Ill_Krunchall_6788:HG2_Ill_GATKHC_7965:HG2_Ill_GATKHCSBGrefine_3216:HG2_Ill_250bpfermikitraw_6657:HG2_Ill_150bpfermikitraw_6192:HG3_PB_pbsv_4649:HG3_Ill_scalpel_4768:HG3_Ill_Spiral_5209:HG3_Ill_Krunchall_6663:HG3_Ill_GATKHC_7968:HG3_Ill_GATKHCSBGrefine_3195:HG3_Ill_250bpfermikitraw_6437:HG3_Ill_150bpfermikitraw_6256;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6192:HG2_Ill_250bpfermikitraw_6657:HG2_Ill_GATKHCSBGrefine_3216:HG2_Ill_GATKHC_7965:HG2_Ill_Krunchall_6788:HG2_Ill_manta_1340:HG2_Ill_scalpel_4685:HG4_Ill_150bpfermikitraw_6405:HG4_Ill_250bpfermikitraw_6708:HG4_Ill_GATKHCSBGrefine_3359:HG4_Ill_GATKHC_8028:HG4_Ill_Krunchall_7062:HG4_Ill_manta_1190:HG4_Ill_scalpel_4592;NumExactMatchSVs=14;ClusterMaxShiftDist=0.271845;ClusterMaxSizeDiff=0.252427;ClusterMaxEditDist=0.368932;PBcalls=6;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=-83;DistForward=49;DistMin=-83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=198;REFWIDENED=4:104358600-104358797;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:43:0|1:31:7:3:30:./.:0:0:0:0:0/1:30:18:./.:.:.:.:.:.
chr4	104403622	HG2_Ill_Krunchall_6789	C	CTGAGACTGGGGAAATACTCAGAATAAGCAAAAGGGAAAATGTGGAGGATGTGCCATGCCAGGTCCAAA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9656:HG2_PB_pbsv_4766:HG2_PB_HySA_8955:HG4_Ill_svaba_6218:HG4_Ill_Krunchall_7064:HG4_Ill_GATKHC_8030:HG4_Ill_GATKHCSBGrefine_3361:HG4_Ill_250bpfermikitraw_6710:HG2_PB_assemblyticsfalcon_19862:HG2_Ill_svaba_6097:HG2_Ill_manta_1341:HG2_Ill_Krunchall_6789:HG2_Ill_GATKHC_7966:HG2_Ill_GATKHCSBGrefine_3217:HG2_Ill_250bpfermikitraw_6658:HG4_Ill_SVrefine2DISCOVARDovetail_3659;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6658:HG2_Ill_GATKHCSBGrefine_3217:HG2_Ill_GATKHC_7966:HG2_Ill_Krunchall_6789:HG2_Ill_manta_1341:HG2_Ill_svaba_6097:HG2_PB_assemblyticsfalcon_19862:HG4_Ill_250bpfermikitraw_6710:HG4_Ill_GATKHCSBGrefine_3361:HG4_Ill_GATKHC_8030:HG4_Ill_Krunchall_7064:HG4_Ill_svaba_6218;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.157143;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=68;DistBack=1483;DistForward=15962;DistMin=1483;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=72;REFWIDENED=4:104403619-104403690;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4102.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:42:./.:19:13:18:22:./.:0:0:0:0:0/1:19:27:./.:.:.:.:.:.
chr4	104744609	HG3_Ill_GATKHCSBGrefine_3197	T	TTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTAGGTGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_2176:HG2_PB_pbsv_4769:HG2_PB_HySA_8960:HG2_PB_HySA_8959:HG3_PB_HySA_7339:HG2_PB_HySA_8958:HG4_Ill_GATKHCSBGrefine_3363:HG3_Ill_GATKHCSBGrefine_3197:HG2_Ill_GATKHCSBGrefine_3220:HG2_PB_PB10Xdip_21209:HG2_Ill_breakscan11_3473:HG4_PB_pbsv_4801:HG2_PB_assemblyticsfalcon_19866:HG2_PB_assemblyticsPBcR_19229:HG3_PB_assemblyticsfalcon_19804:HG2_PB_SVrefine2Falcon2Bionano_2298:HG3_PB_pbsv_4651:HG2_PB_SVrefine2Falcon1plusDovetail_8900:HG2_PB_SVrefine2PBcRplusDovetail_8274:HG2_PB_SVrefine2PB10Xhap12_3470:HG2_10X_SVrefine210Xhap12_3509:HG3_PB_SVrefine2Falcon1Dovetail_2950;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3220:HG3_Ill_GATKHCSBGrefine_3197:HG4_Ill_GATKHCSBGrefine_3363;NumExactMatchSVs=3;ClusterMaxShiftDist=0.13267;ClusterMaxSizeDiff=0.13267;ClusterMaxEditDist=0.235489;PBcalls=17;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=303;DistBack=-14000;DistForward=-1;DistMin=-14000;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:104744602-104744617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:97:1/1:1:27:2:25:./.:0:0:0:0:1/1:0:31:1/1:1:63:.:.:.
chr4	109330947	HG2_PB_SVrefine2PB10Xhap12_3485	T	CGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGGGGGGGGGTCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGACGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAATGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGTGGGGGGGGGGTC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2965:HG4_PB_SVrefine2Falcon1Dovetail_2933:HG2_PB_SVrefine2Falcon1plusDovetail_8913:HG4_PB_SVrefine2PBcRDovetail_2449:HG2_PB_SVrefine2Falcon2Bionano_2306:HG2_PB_SVrefine2PBcRplusDovetail_8285:HG2_PB_SVrefine2PB10Xhap12_3485;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3485:HG2_PB_SVrefine2PBcRplusDovetail_8285;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0609756;ClusterMaxSizeDiff=0.0609756;ClusterMaxEditDist=0.0967239;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=337;DistBack=46;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=4:109330948-109330982;PctSeqSimilarity=0.9957;PctSizeSimilarity=0.997;PctRecOverlap=0.9587;SizeDiff=-1;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=98;MatchId=4105.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:45:1/1:3:14:1:10:./.:0:0:0:0:1/1:0:11:0/1:2:13:.:.:.
chr4	110248315	HG2_PB_SVrefine2Falcon1plusDovetail_8916	A	AAAGGTACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATGTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTACGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAAGGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATGTTATGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACGTTTTGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCACTGTTAGTCTGATGGGCTTTTTTGAGGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGTTTTCGTGTAGATGTCCTTTCGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGTCAGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGCTCCTCCCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3488:HG4_PB_pbsv_4823:HG2_PB_assemblyticsfalcon_19906:HG2_PB_PB10Xdip_21231:HG2_PB_SVrefine2Falcon1plusDovetail_8916:HG4_PB_SVrefine2PBcRDovetail_2452:HG4_PB_SVrefine2Falcon1Dovetail_2935;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8916;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0474103;ClusterMaxSizeDiff=0.0474103;ClusterMaxEditDist=0.102939;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=6036;DistBack=12207;DistForward=38925;DistMin=12207;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=4:110248316-110248332;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9923;PctRecOverlap=0.9924;SizeDiff=-47;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4106.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:30:0|1:38:0:0:23:./.:0:0:0:0:0/1:35:10:0/1:264:615:.:5959:.
chr4	110518669	HG3_PB_SVrefine2Falcon1Dovetail_2969	C	CCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2937:HG3_PB_assemblyticsfalcon_19845:HG2_PB_pbsv_4791:HG3_PB_SVrefine2Falcon1Dovetail_2969:HG4_PB_pbsv_4825:HG4_PB_SVrefine2PBcRDovetail_2454;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2969;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0603015;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.263959;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=95;DistBack=100;DistForward=58840;DistMin=100;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5149;REFWIDENED=4:110528398-110518706;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9694;PctRecOverlap=0.3737;SizeDiff=-3;StartDistance=60;EndDistance=60;GTMatch=0;TruScore=77;MatchId=4107.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:25:1|0:0:23:21:1:./.:0:0:0:0:./.:38:4:./.:.:.:.:.:.
chr4	110704968	HG3_Ill_GATKHC_8012	G	GATATATATATATATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8292:HG3_Ill_Spiral_5241:HG2_PB_pbsv_4793:HG3_Ill_GATKHC_8012:HG3_PB_pbsv_4680:HG3_Ill_GATKHCSBGrefine_3215:HG2_PB_SVrefine2Falcon2Bionano_2309:HG2_PB_SVrefine2PB10Xhap12_3492;NumClusterSVs=8;ExactMatchIDs=HG3_Ill_GATKHC_8012;NumExactMatchSVs=1;ClusterMaxShiftDist=0.326531;ClusterMaxSizeDiff=0.326531;ClusterMaxEditDist=0.326531;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=12097;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=22;REFWIDENED=4:110704969-110704990;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:40:0|1:5:0:1:5:./.:0:0:0:0:0/1:15:12:./.:.:.:.:.:.
chr4	111188110	HG2_Ill_GATKHCSBGrefine_3241	G	GTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACCTGAGGTCAGGAGTTCAAGACCACCCTGGTCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGGGCCAGTCGTGGTGCCTCACA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2940:HG2_PB_pbsv_4797:HG4_PB_pbsv_4832:HG4_Ill_GATKHC_8093:HG4_Ill_GATKHCSBGrefine_3385:HG2_Ill_GATKHC_8020:HG2_Ill_GATKHCSBGrefine_3241:HG4_PB_HySA_7174:HG2_PB_HySA_9012:HG4_PB_SVrefine2PBcRDovetail_2455:HG4_Ill_SVrefine2DISCOVARDovetail_3688:HG4_Ill_MetaSV_3856;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3241:HG2_Ill_GATKHC_8020:HG4_Ill_GATKHCSBGrefine_3385:HG4_Ill_GATKHC_8093;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0860215;ClusterMaxSizeDiff=0.078853;ClusterMaxEditDist=0.186207;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=133;DistBack=-280;DistForward=280;DistMin=-280;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=301;REFWIDENED=4:111188090-111188390;PctSeqSimilarity=0.9853;PctSizeSimilarity=0.9708;PctRecOverlap=0.9708;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:15:1|0:3:13:17:1:./.:0:0:0:0:0/1:36:11:./.:.:.:.:.:.
chr4	111260223	HG2_Ill_GATKHC_8021	C	CCTTCCTTCCTTCCTTCCTTCCCCTTCCTTCCTTTTCCTTCCTCCCTTCCT	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_6697:HG3_Ill_svaba_6266:HG3_Ill_scalpel_4794:HG3_Ill_Spiral_5246:HG3_Ill_Krunchall_6705:HG3_Ill_GATKHC_8018:HG3_Ill_GATKHCSBGrefine_3219:HG3_Ill_FB_4375:HG3_Ill_250bpfermikitraw_6472:HG3_Ill_150bpfermikitraw_6294:HG2_Ill_svaba_6152:HG2_Ill_SpiralSDKrefine_12575:HG2_Ill_Krunchall_6834:HG2_Ill_GATKHC_8021:HG2_Ill_GATKHCSBGrefine_3242;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6697:HG3_Ill_svaba_6266:HG3_Ill_scalpel_4794:HG3_Ill_Spiral_5246:HG3_Ill_Krunchall_6705:HG3_Ill_GATKHC_8018:HG3_Ill_GATKHCSBGrefine_3219:HG3_Ill_FB_4375:HG3_Ill_250bpfermikitraw_6472:HG3_Ill_150bpfermikitraw_6294:HG2_Ill_svaba_6152:HG2_Ill_SpiralSDKrefine_12575:HG2_Ill_Krunchall_6834:HG2_Ill_GATKHC_8021:HG2_Ill_GATKHCSBGrefine_3242;NumExactMatchSVs=15;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=9;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=50;DistBack=-1;DistForward=8209;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=4:111260222-111260225;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4110.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:22:5:4:23:./.:0:0:0:0:0/1:23:19:./.:.:.:.:.:.
chr4	112583780	HG2_PB_pbsv_4802	G	GGCGAGGGGGAGGAGGGAGGATGGGGAGAGGGGGAGGAGGGGGAGGCAGGAGCGGGAGAGGGGGGAGGGGGAGGAAGGGGGCAGGGGGAGAGGGGGAATATAGGAGGGGCAGGGGAGAAGGTAGGGGAGGGGGAGGGGGGGAGGGGGGGCAGGGGGAGGAAGGGGCAGGTGGGGAGGGGGGCAGGGGGAGGAGGGGGGAGGGGAAGGGAGGGGGCAGGGGAGGAGGGCAGGGGGAAGGGAGTGGGGGAGGGGAAGGCCAGAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8924:HG2_PB_HySA_9027:HG3_PB_HySA_7387:HG2_PB_PB10Xdip_21239:HG3_PB_SVrefine2PBcRDovetail_2178:HG3_PB_pbsv_4688:HG4_PB_SVrefine2PBcRDovetail_2459:HG2_PB_pbsv_4802:HG2_PB_SVrefine2PB10Xhap12_3499:HG2_PB_SVrefine2PBcRplusDovetail_8299:HG3_PB_SVrefine2Falcon1Dovetail_2976:HG4_PB_SVrefine2Falcon1Dovetail_2944:HG2_PB_SVrefine2Falcon2Bionano_2315;NumClusterSVs=13;ExactMatchIDs=HG2_PB_pbsv_4802;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0948767;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.258687;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=261;DistBack=-49;DistForward=13;DistMin=-49;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=4:112583781-112583832;PctSeqSimilarity=0.9088;PctSizeSimilarity=0.9739;PctRecOverlap=0.8513;SizeDiff=-7;StartDistance=-36;EndDistance=-36;GTMatch=1;TruScore=91;MatchId=4111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:3:27:1:7:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr4	112619627	HG2_10X_SVrefine210Xhap12_3538	GG	AGGGGGGACGTGGGGAAGGGGGGAAGTGGGGAAGGGGGACGTGGGGAAGGGGAGAAGTGGGGAAGGGGGGAAGTGGGGAAGGGGGGAGGGA	20	PASS	ClusterIDs=HG4_PB_pbsv_4838:HG3_PB_HySA_7388:HG4_PB_HySA_7183:HG2_PB_SVrefine2Falcon2Bionano_2316:HG2_10X_SVrefine210Xhap12_3538:HG3_Ill_SVrefine2DISCOVARDovetail_3716:HG2_PB_SVrefine2PB10Xhap12_3500:HG2_PB_assemblyticsPBcR_19285:HG2_PB_SVrefine2PBcRplusDovetail_8300:HG2_PB_assemblyticsPBcR_19284:HG2_PB_HySA_9028:HG2_PB_PB10Xdip_21240:HG3_PB_pbsv_4689:HG2_PB_pbsv_4803;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3538:HG2_PB_SVrefine2Falcon2Bionano_2316;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0685714;ClusterMaxSizeDiff=0.0685714;ClusterMaxEditDist=0.219653;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=89;DistBack=13;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:112619629-112619626;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9888;PctRecOverlap=0.9667;SizeDiff=1;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=98;MatchId=4112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:55:1/1:3:20:1:21:./.:0:0:0:0:./.:0:6:./.:.:.:.:.:.
chr4	112628974	HG3_PB_pbsv_4690	A	AGAGCCAAGATGGCCGAATAGGAACAGCTCGGTCTACACTCCCAGCGTGGCGGACCGCCAGGAAGACGGTGATTTCTGCATTTCCATCTTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACGTGGCGCAGGCCAGTGTTTGTGCGCACCGTGCCGGAGCCGAAGCAGGCGAGGCTGATTGCCTCACCTGGGAAGCCGCAAGGGGTCAGGGAGGTTCCCTTTCCGAGTCAAAGAAAGGGTGACGGACGCACTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGAACCGGCTTAAGAAACGGCCGCACCATGAGACTATATCCCCAACCTGCTCGGAGAGCGTCCTACGCCCACGGAAATCTCCGCTGATTGCTAGGCACAGCAGTCTGAGATCAAAACTGTCAAGGCGGCAACGAGGCTGGTGGAGGGGGCGCCGCCATTGCCCAGGCTTGCTTAGGGTTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGCTCCACCTTCTGGGGCAGCGGCACAGACAAACAAAAAAAGACAGCCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAAGCTTTGAAGAGAGCAGTGGTTTCTCCCAGGGAGCAGCTGGAGATCTGAGAACGCGCCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCCAACTGAGGCACCCCCCAGCAGGCGCACACTGACACCTCACACGGCAGGGTATTCCAAAGACTCTGCAGTGAGGGTCCTGTCTGTTAGAATGGAAAACTAACAAAACCAGAAAGGACATTCTACACCGAAAACCCATCTTGTACATCCACCATCATCAAAAGACAAAGTAGATAAAAACACAAAGATGGGGAAAAAAAACAGACAGAAAAAAACTGGAAACTCTAAAACGCCAGAGCGCCTCTCCTCCTCCAAAGAACGCAGTTCCTCACCAGCAAAGAACAAACTGGATGAGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGAACATTCAAACCAAGGCAAAAAGTTGAAACTTAAAAAAATTTAGAGGAAATGTATAACTAGAAAACCAATACAGATAAGTGGCTTAAAGGAGCTGATGGAGCTGTAAAACCAAGGCTCGAGAACTACGTGAAGAATTGCAGAAGCCTCAGGAGCGATGCGATTCAACTGGAGAAAGGGTATCAGCAAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAGAATAAAAAGAAATGAGCAAAAGCCTCCAAGAAAATATGTGGACTATTGAAAAGACCAAATCTAGTCTGATTGTGTGTACCTGAAATGATGTGGAGAATGAACCAAGTTGCGAAAAACACTCTGCAGGATATTATCAGGAGAACTTCCCCAATCTAGCAGGCAGCGCCAACGTTTCAGATTTCAGAAGTACAGAGAAGCGCCACCAAAAGATACTCGCTCGAGAAAGGCAACTCCAAGACACTAATGTCAGATTCACCAAAGGTTGAAATGGGGAAGGCAAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCCAAAGGGAAAAAGCCATCTAGAACTAACAGCGGATCTCTCGAAAGAAAACCCTACAAGCCAGAAGAGAGTGGCGGGGCCAATATTCAACATCTTAAAGAAAAGAATTTTCAAACCCTAGGAATTTCATATCCAGCCAAACTAAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAATTGTTGAGAGATTTGTACCACCAGGCCTTGCCCTTAAAGAGTCCTGAAGGAAGCGCTAAACATGGGAAAGGAACAACCGGTACCAGCCGCCTGCAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACGCCATCAACTAATGAGCAAAATCACCAGCTAAACATCATAATGACAGGATCAAAATTCAACATAACAATATTAACTTTAAATATAAATGGACTAGATTTCTGCAATTAAAAGACACAGGATGGCAAGTTGGGAATAAAAGAGTCAAAGACCCCATCAGAGTGCTGTATTCAGAAACCCCATCTCACGTGCAGAGACAACACATAGGCTCAAAATAAAAGGATGGAGGAGCATTACCAAGCCCAATGGAAAACAAAAAAAGGGCAGTGGGTTGCAATCCTTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTTCAAAAGAGGAAAGCTAACTAATCCTAAATATTTATGGCACCCAATACAGGAAGCACCCAAGATGCATAAAAGCAAGTCCTCAGTGACCTACAAAAGAGACTTAGACTCCCACACATTAATAATGGAGACTTTAACAACCCCACTGTCAAACATAGACAGATCAACGAGACAAGAAAGTCAACAAGGATTAACCCAGGAATTTGAACTCAGCTCTGCAACCAAGCAGACCTAATAGACAGTCTACAGAAACTCTTCCACCCCAAATCAAACAGAATATACATTTTTTCAGCACCCACACCACAGCCTATTCCAAAAATTGACCAACATAGTCGGAAAGTAAAGCTCTCCTCAGCAAATGTAAAGAAACCAGAAATTATAACAACTATCTCTCAGAACCACAGTGCATTCACAACTAGAACTCAGGATTAAGAATCTCACTCAATAGCCGCTCAACTACATGGAACTGAACAACCTGCTCCTGAATTGACTACTGGGTACATAACGAATGAAGGCGAAAGAAAATAAGATGTTCTTTGAAAACCAACGAGAAACAAGACACACATACCAGAATCCTGGGACGCATTCAAAAGCAGTGTGTAGAGGCGAAATTTATGCACTAAATGCCTTACAAGAGAAAGCCAAGGAAAAGATCCAAAATTTGACACCCTAACAATCACAATTAAAAGAACTAGAAAAGCAAGAGGAAACACATTCAAAAAGCTAGCAGAAGCAAGAAAAATAACTAAAATCAGAGCAGAACTGAAGGAAAATAGAGACACAAAAAAACCTTCAAAAATCAATCGAATCCAGGAGCTGGTTTTTTGAAAGGTATCAACAAAATTGATAGACCGCTTAGCAAGACTAATAAAGAAAAAGAGAGAGAAGAATCATAGACACAATAAAAAAATGATTAAAGGGATATCACCACCCGATCCCACAGGAAATACAGAACTACCATCAGAGAAATACTACCAAACACCTCTACGCAAATAAAACTAGAAAATCTAGAAGAAATGGATACATCCTCGACACATACACTCTCCCAAGACAAAACCAGGAAGAAGTTGAATCTCTGAATTAGACCAATAACAGGCTCCTAAAAATGTGGCAATAATCAAGTAGTTTACCAACCAAAAAGAGGTTTCCAGGAACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACCATGGCAGGAACTTACCATTTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATACCTCCCTAATACTCAATTTATGAGGCCCAGCTCATTCTGATACCAAAGCCGGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGTATGAACATTGATGCAAAAATCCTCAATAAATACTGGGCAAACCGAATCCAGCGCACATCAAAAAGCTTATCCACATGATCAAGTTGGGCTTCATCCTGGATGCAAGGCTGGTCAATATACGCAAATCAATTAAATGTAATCCAGCATATAAACAGAGCCCCAAAAAAAAAAAGGACAAAACCACATGATTATCTCATAGATGCAGAAAAAGCCTTTGACAAAAAATTCAACACCCTTTCATGCTAAAAACTCTCAATTAATTAGGTATTGATGGACGTATTTCAAAATAATAGAGCTATCTATGACAACCCACAGCCAATATCATTACTGAATGGGCAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGAAATGCCCTCTCTCACCGCTCCTATTAACATAGTGTGTGGAAGTCTGGCCAGAGGGCAATCAGCAGGAGAAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAATGGGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTTTATCTAGAAACCCCATCGTCTCAGCCCAAAATTCCTTAAGCTGATAAGGCACTTTCAGCAAAATTCTCAGGATACAAATCAATGTACCAAAAATCACCAGATTCTTATACACCAAAACAGACAAAACAGAGAGCCAGATTCGATGGGTGAACTCCCATTCACAATTGGTCAAGAGAATAAAATACTAGGAATCCACTTACAAGGGATTGAGGACCTTCTTCAAGGAGAACTACAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGCAAGAAATTCCATGTCATGGTAGGGAAGAATTTCAATATCGTGAAAAAATGCCATACTGCCCAAGGTAATAATTTACAGATTCAATGCCATCCCATCAAGCTACCAATGACTTTCACAGAATGGAAAAAAACTACTTTAAAGTTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTTCAATGCCTAAGCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACCTATACTAACAGGCTACAGTAACCAAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAAATATGCCGGCTATCTACAACTATCTGATCTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAAATGGTGCTGGAAAACTGGTAGCCATATGTAGAAAGCTTGAAACTGGATCCCTCCTTTACACCTTATACAAAATCAATCAAGATGGATTAAGTTTAAACGTTAAACCTAAAAACCATAAAAACCTAGAAGAAAACTAAGGCATAACCATTCAGGACCATAGGCGTCTTGGGCAAGACTTCATGTCCAAAACACCAAAAAGGCAATGGCAACAAAAGACAAAATTGAACAAAAATGGATCTAATTAAACTAAAGAGCTTCTCCAGCAAAAGAAACTACCATCAGACGTGAAACAGGCAACCTACAACATAGGGAGAAAATTTTTGCAACCTTACTCATCTGACAAAGGCTAATATCCAATCTACAAATGAACTTCAAACAAATTTTACAAGAAAAAACAAAACAACCCCATCAAAAAGTGCGGCGAAGGACATGAAACAGACATGCTCAAAGAAGAATTTATGCAGCCCAAACATCATTGAAGAAATGCTCATCATCACTGGCCATCAGAAAATGCAAAGCAAAAAACCACTATGAGATTCATCTCACACCAGTTAGAATGGCCAATCATTAAAAAAGTCCCAAAGAACAACAAGGTGCTGGAGAGGATGCGGAGAAAATAGGAAACACTTTTACACTGTTGTGGGGACTGTAAACTAGTTCAACCATTGTGAAGTCAGTGTGGGCGTTCCTTTCAGGATCTAGAACTAGAACTACCATTTTGACCCAGCCATCCCGATGTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACAATTGCACACGTATGATTTATGCGGCACTATTCCACAATAGCAAAAGACTGGGGGAACCAACCCAAAGCCTCCAAACAATGATAGACTGGATTAAGAAAAATGTGGCACAATACACCATGGGAATACTATTGCAGCCATTAAAAGAATGATGAGTTATATCCTTTGTAGGGACATGGATGAAAATTGGAAACCATCATTCGTCAGTAAAAACTATCGCACAAGAAACCAAAAAAACCAAACACCGCATATTCTCACTCATAGGGTGGAATTGAACATGAGATCACATGACACTGGGAAGGGGAATAATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGAGGAAATAGCATTGGGAGAGTTATAACCAATGCTAGATGACAACAAATTAAAGTGCGTGCAAGCGCACCAGCATGGCACATGATAACATATGTAATAACCTGCACAATGGTGCACATCTTGTACCCTAAAACTTAGAGTATAATATTAAAAAAAAAAAAAAAAAAAAATGAAAAAAAAAAAAATAAAGTTATCTCAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2945:HG3_PB_pbsv_4690:HG4_PB_pbsv_4839:HG3_PB_assemblyticsfalcon_19861:HG3_PB_SVrefine2PBcRDovetail_2179:HG3_PB_SVrefine2Falcon1Dovetail_2977;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_4690;NumExactMatchSVs=1;ClusterMaxShiftDist=0.058762;ClusterMaxSizeDiff=0.058762;ClusterMaxEditDist=0.183058;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=0;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=6219;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:112628960-112628974;PctSeqSimilarity=0.9566;PctSizeSimilarity=0.9735;PctRecOverlap=0.9736;SizeDiff=165;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=96;MatchId=4113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:47:46:./.:28:8:6:13:./.:0:0:0:0:0/1:28:12:0/1:196:36:.:6052:.
chr4	112698424	HG3_PB_SVrefine2Falcon1Dovetail_2978	T	TAAAAGATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_7184:HG3_PB_pbsv_4691:HG2_PB_assemblyticsfalcon_19927:HG2_PB_pbsv_4804:HG4_PB_SVrefine2Falcon1Dovetail_2946:HG3_PB_assemblyticsfalcon_19862:HG3_PB_SVrefine2PBcRDovetail_2180:HG3_PB_SVrefine2Falcon1Dovetail_2978:HG2_PB_SVrefine2Falcon1plusDovetail_8925:HG2_Ill_breakscan11_3475:HG3_PB_HySA_7389;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2978:HG3_PB_SVrefine2PBcRDovetail_2180;NumExactMatchSVs=2;ClusterMaxShiftDist=0.114035;ClusterMaxSizeDiff=0.114035;ClusterMaxEditDist=0.225146;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=340;DistBack=12069;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=4:112698425-112698437;PctSeqSimilarity=0.9884;PctSizeSimilarity=0.977;PctRecOverlap=0.9771;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4114.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:61:33:0|1:50:1:5:22:./.:0:0:0:0:0/1:27:13:0/1:8:36:.:.:.
chr4	112730126	HG2_Ill_SVrefine2DISCOVARplusDovetail_9694	A	GATGTATGGAAAGCAAAGAGAAGCTCTGGGGTTAATGACTGTTGGGCCACCAATTTCTGCACAAGAGCCAGAACAGGGGAAGGAAGCAATGTTGATGTTTAAGGGCAAAGCCAGTGTG	20	PASS	ClusterIDs=HG2_PB_HySA_9029:HG2_PB_assemblyticsfalcon_19928:HG2_PB_SVrefine2Falcon1plusDovetail_8926:HG3_PB_SVrefine2PBcRDovetail_2181:HG2_PB_SVrefine2Falcon2Bionano_2317:HG2_Ill_SVrefine2DISCOVARplusDovetail_9694:HG2_10X_SVrefine210Xhap12_3539:HG3_PB_HySA_7390:HG2_PB_pbsv_4805;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9694:HG2_PB_SVrefine2Falcon2Bionano_2317;NumExactMatchSVs=2;ClusterMaxShiftDist=0.102564;ClusterMaxSizeDiff=0.102564;ClusterMaxEditDist=0.188034;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=117;DistBack=18;DistForward=20661;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=117;REFWIDENED=4:112730084-112730200;PctSeqSimilarity=0.9957;PctSizeSimilarity=0.9915;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:35:0|1:22:2:3:28:./.:0:0:0:0:0/1:28:21:./.:.:.:.:.:.
chr4	114018249	HG3_Ill_GATKHCSBGrefine_3228	T	TCACTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAACCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3476:HG2_PB_HySA_9037:HG3_PB_assemblyticsfalcon_19869:HG2_PB_assemblyticsPBcR_19291:HG2_PB_assemblyticsfalcon_19937:HG4_PB_pbsv_4845:HG2_PB_pbsv_4810:HG3_PB_pbsv_4695:HG3_PB_HySA_7398:HG2_PB_SVrefine2Falcon2Bionano_2319:HG3_PB_SVrefine2Falcon1Dovetail_2981:HG3_Ill_MetaSV_3856:HG3_Ill_GATKHCSBGrefine_3228:HG2_PB_SVrefine2PBcRplusDovetail_8302:HG2_PB_SVrefine2PB10Xhap12_3503:HG2_Ill_MetaSV_3682:HG4_PB_SVrefine2Falcon1Dovetail_2950:HG4_Ill_MetaSV_3861:HG4_Ill_GATKHCSBGrefine_3394:HG2_Ill_GATKHCSBGrefine_3252:HG2_PB_SVrefine2Falcon1plusDovetail_8929:HG2_PB_HySA_9036:HG4_PB_HySA_7197:HG2_PB_PB10Xdip_21250;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_MetaSV_3682:HG2_PB_SVrefine2PB10Xhap12_3503:HG2_PB_SVrefine2PBcRplusDovetail_8302:HG3_Ill_GATKHCSBGrefine_3228:HG3_Ill_MetaSV_3856;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0505529;ClusterMaxSizeDiff=0.044164;ClusterMaxEditDist=0.188563;PBcalls=17;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=315;DistBack=31945;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:114018250-114018264;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:62:1/1:0:16:0:26:./.:0:0:0:0:1/1:0:26:1/1:2:55:.:.:.
chr4	114716263	HG2_PB_SVrefine2Falcon1plusDovetail_8930	A	AAAGCATTTTGTAAAATTGGACATTTCTTTAGGAAAAAACCCCATACAATCTGGATAGAAAGGAAACATACCTTAAATT	20	PASS	ClusterIDs=HG4_PB_HySA_7198:HG2_PB_pbsv_4811:HG2_PB_HySA_9039:HG2_PB_PB10Xdip_21251:HG4_Ill_scalpel_4644:HG4_Ill_GATKHC_8118:HG4_Ill_GATKHCSBGrefine_3395:HG2_PB_SVrefine2PB10Xhap12_3504:HG2_PB_SVrefine2Falcon2Bionano_2320:HG2_PB_SVrefine2Falcon1plusDovetail_8930:HG2_Ill_scalpel_4738:HG2_Ill_GATKHC_8051:HG2_Ill_GATKHCSBGrefine_3253;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3253:HG2_Ill_GATKHC_8051:HG2_Ill_scalpel_4738:HG2_PB_SVrefine2Falcon1plusDovetail_8930:HG2_PB_SVrefine2Falcon2Bionano_2320:HG2_PB_SVrefine2PB10Xhap12_3504:HG4_Ill_GATKHCSBGrefine_3395:HG4_Ill_GATKHC_8118:HG4_Ill_scalpel_4644;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.157576;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=78;DistBack=-78;DistForward=-1;DistMin=-78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=80;REFWIDENED=4:114716264-114716343;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:37:./.:21:8:3:25:./.:0:0:0:0:0/1:4:11:./.:.:.:.:.:.
chr4	115012948	HG2_Ill_MetaSV_3683	C	CAAAGAAGGAAGTTCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3505:HG4_PB_HySA_7202:HG3_PB_assemblyticsfalcon_19871:HG4_PB_assemblyticsfalcon_19494:HG4_PB_pbsv_4848:HG2_PB_pbsv_4812:HG2_PB_PB10Xdip_21252:HG2_PB_assemblyticsfalcon_19941:HG3_PB_SVrefine2Falcon1Dovetail_2982:HG4_PB_SVrefine2Falcon1Dovetail_2952:HG4_Ill_MetaSV_3864:HG4_Ill_GATKHCSBGrefine_3397:HG2_Ill_SVrefine2DISCOVARplusDovetail_9703:HG2_Ill_MetaSV_3683:HG2_PB_SVrefine2Falcon1plusDovetail_8931;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_MetaSV_3683:HG2_Ill_SVrefine2DISCOVARplusDovetail_9703:HG4_Ill_GATKHCSBGrefine_3397:HG4_Ill_MetaSV_3864;NumExactMatchSVs=4;ClusterMaxShiftDist=0.199336;ClusterMaxSizeDiff=0.199336;ClusterMaxEditDist=0.269551;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=50675;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:115012949-115012964;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:58:0|1:36:5:1:39:./.:0:0:0:0:0/1:22:12:0/1:11:26:.:.:.
chr4	115152141	HG2_Ill_MetaSV_3684	G	GGGGGGAGGGGAGAGGGAGAGAGAGAGGGAGAGGGAGAAAGAGAAGGTGCTACGTACTTTTAAACAACCAGGTCTTGTGAGAACTCACTCATGAGAACAGCACCAAGGGAACAGTGCTAAATTATTCATGAGAAACTGCCCATATGATCCAATCGCCTCTTACCACACCCCACCTCCAATATTGGGGATCACAATTCCACATGAGATTTGGGTGGGAACATAGATCCAAACCATATCACTTGTGTTGTTGTTTTAATTTAACTAAGATGTAACTTAAAAAAATGTTCTTGGAGGAAGGAGGAAAATGGTGAAAAGGAAGCAGGAATAGGAACATCACACTCTGGGGACTGTTGTGGGGTT	20	PASS	ClusterIDs=HG2_PB_HySA_9041:HG4_PB_HySA_7203:HG2_PB_pbsv_4813:HG3_PB_pbsv_4697:HG4_PB_pbsv_4849:HG2_PB_assemblyticsfalcon_19942:HG2_PB_SVrefine2Falcon1plusDovetail_8932:HG4_Ill_MetaSV_3865:HG4_Ill_GATKHCSBGrefine_3398:HG3_Ill_MetaSV_3857:HG2_Ill_MetaSV_3684:HG3_Ill_GATKHCSBGrefine_3230:HG2_Ill_GATKHCSBGrefine_3254:HG2_Ill_breakscan11_3477:HG2_PB_PB10Xdip_21253:HG4_PB_assemblyticsfalcon_19495:HG2_PB_assemblyticsPBcR_19296:HG3_PB_assemblyticsfalcon_19874:HG4_PB_SVrefine2Falcon1Dovetail_2953:HG4_Ill_SVrefine2DISCOVARDovetail_3699:HG3_PB_SVrefine2PBcRDovetail_2184:HG3_Ill_SVrefine2DISCOVARDovetail_3726:HG2_Ill_SVrefine2DISCOVARplusDovetail_9704:HG3_PB_SVrefine2Falcon1Dovetail_2984:HG2_PB_SVrefine2PBcRplusDovetail_8304:HG2_PB_SVrefine2PB10Xhap12_3506:HG2_PB_SVrefine2Falcon2Bionano_2321:HG3_PB_HySA_7403;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_MetaSV_3684:HG3_Ill_MetaSV_3857:HG4_Ill_GATKHCSBGrefine_3398:HG4_Ill_MetaSV_3865;NumExactMatchSVs=4;ClusterMaxShiftDist=0.19774;ClusterMaxSizeDiff=0.19774;ClusterMaxEditDist=0.225392;PBcalls=18;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=359;DistBack=19450;DistForward=4478;DistMin=4478;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=4:115152137-115152161;PctSeqSimilarity=0.9986;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:1:24:0:38:./.:0:0:0:0:1/1:0:9:1/1:2:80:.:.:.
chr4	116381174	HG2_Ill_manta_1361	CAC	TATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATATATATATGTATATGTGTATATATATATGTATATATATAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6272:HG2_PB_pbsv_4819:HG2_PB_SVrefine2Falcon2Bionano_2325:HG2_Ill_manta_1361:HG2_Ill_SVrefine2DISCOVARplusDovetail_9713:HG2_PB_HySA_9051:HG2_PB_assemblyticsfalcon_19952:HG4_PB_HySA_7214:HG4_PB_assemblyticsfalcon_19504:HG4_Ill_GATKHC_8138:HG2_Ill_GATKHC_8071:HG2_Ill_GATKHCSBGrefine_3260;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9713:HG2_Ill_manta_1361:HG2_PB_SVrefine2Falcon2Bionano_2325;NumExactMatchSVs=3;ClusterMaxShiftDist=0.128655;ClusterMaxSizeDiff=0.128655;ClusterMaxEditDist=0.228916;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=86;DistBack=2;DistForward=10797;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:116381173-116381177;PctSeqSimilarity=0.9898;PctSizeSimilarity=1;PctRecOverlap=0.8764;SizeDiff=0;StartDistance=9;EndDistance=11;GTMatch=0;TruScore=95;MatchId=4122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:0|1:29:4:0:31:./.:0:0:0:0:0/1:22:10:./.:.:.:.:.:.
chr4	116843584	HG3_Ill_Krunchall_6760	A	ATATATATACATATATATACATATATATACATGTATACATGTATATATATG	20	PASS	ClusterIDs=HG2_PB_HySA_9055:HG2_PB_HySA_9058:HG2_PB_HySA_9057:HG4_PB_HySA_7218:HG4_Ill_svaba_6310:HG3_Ill_svaba_6306:HG2_Ill_svaba_6190:HG3_PB_HySA_7421:HG4_Ill_manta_1211:HG4_Ill_GATKHC_8141:HG4_Ill_scalpel_4655:HG4_Ill_Krunchall_7163:HG4_Ill_GATKHC_8142:HG4_Ill_250bpfermikitraw_6795:HG4_Ill_150bpfermikitraw_6493:HG2_Ill_scalpel_4751:HG2_Ill_GATKHC_8075:HG2_Ill_250bpfermikitraw_6740:HG2_Ill_150bpfermikitraw_6278:HG3_Ill_GATKHC_8069:HG2_Ill_GATKHC_8074:HG3_Ill_manta_1118:HG3_Ill_Spiral_5289:HG2_PB_HySA_9056:HG4_Ill_svaba_6309:HG3_PB_pbsv_4709:HG4_Ill_Krunchall_7162:HG4_Ill_150bpfermikitraw_6492:HG3_Ill_svaba_6305:HG3_Ill_scalpel_4831:HG3_Ill_Krunchall_6760:HG3_Ill_FB_4412:HG3_Ill_250bpfermikitraw_6518:HG3_Ill_150bpfermikitraw_6349:HG2_Ill_svaba_6189:HG2_Ill_FB_4416:HG2_Ill_150bpfermikitraw_6277;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6277:HG2_Ill_FB_4416:HG2_Ill_svaba_6189:HG3_Ill_150bpfermikitraw_6349:HG3_Ill_250bpfermikitraw_6518:HG3_Ill_FB_4412:HG3_Ill_Krunchall_6760:HG3_Ill_scalpel_4831:HG3_Ill_svaba_6305:HG4_Ill_150bpfermikitraw_6492:HG4_Ill_Krunchall_7162:HG4_Ill_svaba_6309;NumExactMatchSVs=12;ClusterMaxShiftDist=0.313726;ClusterMaxSizeDiff=0.313726;ClusterMaxEditDist=0.392157;PBcalls=7;Illcalls=30;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=2;DistForward=5;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=74;REFWIDENED=4:116843571-116843644;PctSeqSimilarity=0.9683;PctSizeSimilarity=0.9615;PctRecOverlap=0.7736;SizeDiff=-2;StartDistance=-11;EndDistance=-11;GTMatch=1;TruScore=90;MatchId=4123.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:50:1/1:4:30:3:10:./.:0:0:0:0:1/1:1:37:./.:.:.:.:.:.
chr4	118119725	HG2_PB_assemblyticsfalcon_19967	T	TATAATATATAAATATAATATATATAATATAATATATATAATATAATATTAATATAATATAATAAATATATATTAATATAATATATATAATATAATATATTATATATAATATATATAATATAATATATTATATATAATATATATAAAATATATATATAATAATATATATATATATAATATATATATATAATATATATAATATAATATATTATATATAATATATATAATATAATATAATAAATATATATTATATATAATAATATATAATTAATATATTATATATAATATATATAATATAATATAAATATATTATATATAATATAATATATATATATAATATATATAATATAATATATTATATATAATATATATAATATATTATATTATAAATATATAATATAATATATTATATATAATAATAATATAATTATATATATAATATTAATAATATATTAAATATATATATATATAATATATTATATATAATATATATAATATAATATATTATA	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_2194:HG2_PB_assemblyticsfalcon_19968:HG2_PB_SVrefine2Falcon1plusDovetail_8943:HG2_PB_SVrefine2Falcon1plusDovetail_8942:HG2_PB_assemblyticsfalcon_19967:HG2_PB_pbsv_4831:HG4_PB_pbsv_4864:HG2_PB_SVrefine2Falcon1plusDovetail_8944:HG2_PB_assemblyticsfalcon_19970:HG2_PB_SVrefine2Falcon1plusDovetail_8945:HG2_PB_assemblyticsfalcon_19969:HG4_PB_SVrefine2Falcon1Dovetail_2966:HG3_PB_SVrefine2Falcon1Dovetail_2993;NumClusterSVs=13;ExactMatchIDs=HG2_PB_assemblyticsfalcon_19967;NumExactMatchSVs=1;ClusterMaxShiftDist=0.330472;ClusterMaxSizeDiff=0.330472;ClusterMaxEditDist=0.332618;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=508;DistBack=52;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=179;REFWIDENED=4:118119598-118119776;PctSeqSimilarity=0.9638;PctSizeSimilarity=0.9425;PctRecOverlap=0.9443;SizeDiff=-31;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:52:1|0:1:43:31:2:./.:0:0:0:0:0/1:20:5:0/1:12:20:.:.:.
chr4	120717529	HG2_PB_SVrefine2PB10Xhap12_3526	T	TTGTAACACTCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTACAGTAATTTCATTTTTATTTATTTTTATTTTTTTTTTTAATTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_21313:HG3_PB_pbsv_4723:HG2_PB_HySA_9091:HG4_PB_pbsv_4871:HG3_PB_HySA_7452:HG2_PB_pbsv_4837:HG2_PB_assemblyticsPBcR_19336:HG3_Ill_MetaSV_3868:HG2_PB_SVrefine2PBcRplusDovetail_8322:HG2_PB_SVrefine2PB10Xhap12_3526:HG2_PB_SVrefine2Falcon2Bionano_2333:HG3_PB_SVrefine2PBcRDovetail_2200:HG2_PB_SVrefine2Falcon1plusDovetail_8950:HG4_Ill_GATKHCSBGrefine_3416:HG2_10X_SVrefine210Xhap12_3541:HG4_PB_SVrefine2Falcon1Dovetail_2969:HG2_PB_HySA_9090;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2333:HG2_PB_SVrefine2PB10Xhap12_3526:HG2_PB_SVrefine2PBcRplusDovetail_8322;NumExactMatchSVs=3;ClusterMaxShiftDist=0.128224;ClusterMaxSizeDiff=0.128224;ClusterMaxEditDist=0.171512;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=655;DistBack=-1;DistForward=13;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:120717530-120717544;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9985;PctRecOverlap=0.997;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:0:8:0:15:./.:0:0:0:0:1/1:0:26:1/1:5:186:.:.:.
chr4	120914790	HG3_Ill_manta_1122	A	AATGTTATCTGAAACAAAATACTGAGTAATGTCAGGCCTCCGAGCCCAAGCCAAGCCATCGC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_6771:HG3_PB_pbsv_4724:HG2_PB_pbsv_4838:HG3_PB_HySA_7453:HG2_PB_HySA_9092:HG2_PB_PB10Xdip_21314:HG4_PB_SVrefine2PBcRDovetail_2464:HG4_PB_SVrefine2Falcon1Dovetail_2970:HG4_Ill_svaba_6340:HG4_Ill_manta_1216:HG4_Ill_Krunchall_7201:HG4_Ill_GATKHC_8174:HG4_Ill_GATKHCSBGrefine_3417:HG4_Ill_250bpfermikitraw_6824:HG4_Ill_150bpfermikitraw_6524:HG3_PB_SVrefine2PBcRDovetail_2201:HG3_PB_SVrefine2Falcon1Dovetail_2999:HG3_Ill_svaba_6332:HG3_Ill_manta_1122:HG3_Ill_Krunchall_6794:HG3_Ill_GATKHC_8103:HG3_Ill_GATKHCSBGrefine_3255:HG3_Ill_250bpfermikitraw_6551:HG3_Ill_150bpfermikitraw_6382:HG2_PB_SVrefine2PBcRplusDovetail_8323:HG2_PB_SVrefine2PB10Xhap12_3527:HG2_PB_SVrefine2Falcon2Bionano_2334:HG2_PB_SVrefine2Falcon1plusDovetail_8951:HG2_Ill_svaba_6216:HG2_Ill_scalpel_4775:HG2_Ill_manta_1367:HG2_Ill_Krunchall_6922:HG2_Ill_GATKHC_8110:HG2_Ill_GATKHCSBGrefine_3273;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6771:HG4_PB_SVrefine2PBcRDovetail_2464:HG4_PB_SVrefine2Falcon1Dovetail_2970:HG4_Ill_svaba_6340:HG4_Ill_manta_1216:HG4_Ill_Krunchall_7201:HG4_Ill_GATKHC_8174:HG4_Ill_GATKHCSBGrefine_3417:HG4_Ill_250bpfermikitraw_6824:HG4_Ill_150bpfermikitraw_6524:HG3_PB_SVrefine2PBcRDovetail_2201:HG3_PB_SVrefine2Falcon1Dovetail_2999:HG3_Ill_svaba_6332:HG3_Ill_manta_1122:HG3_Ill_Krunchall_6794:HG3_Ill_GATKHC_8103:HG3_Ill_GATKHCSBGrefine_3255:HG3_Ill_250bpfermikitraw_6551:HG3_Ill_150bpfermikitraw_6382:HG2_PB_SVrefine2PBcRplusDovetail_8323:HG2_PB_SVrefine2PB10Xhap12_3527:HG2_PB_SVrefine2Falcon2Bionano_2334:HG2_PB_SVrefine2Falcon1plusDovetail_8951:HG2_Ill_svaba_6216:HG2_Ill_scalpel_4775:HG2_Ill_manta_1367:HG2_Ill_Krunchall_6922:HG2_Ill_GATKHC_8110:HG2_Ill_GATKHCSBGrefine_3273;NumExactMatchSVs=29;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.0787402;ClusterMaxEditDist=0.184615;PBcalls=13;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=61;DistBack=-60;DistForward=-1;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=63;REFWIDENED=4:120914791-120914853;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4127.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:67:1/1:1:16:3:13:./.:0:0:0:0:1/1:1:56:./.:.:.:.:.:.
chr4	121137438	HG2_PB_SVrefine2Falcon2Bionano_2336	TAA	AGTCATTTGTTTTAAATTTTTAAATTTTCTTTTTAAGAAAATTTCTTCAAGATGCTTAGTCATAATTTTATTTAATAAAGCTAAAAGTAAAAATGAATCTAATATCCTGTATAAACAAGCATGCTTTCCAGATAGAGTTTATTTTAAATCTTGAGTGATTGAGGCAATTATAAGGCTTATTCTCAAATTTAATTACAGTATTATTTGGGTAAATAATAGTTTATATAGATATTTAATATATTCTTTATCTCCTTCTGCATGTATTTCCTTCTTCAATTTTGAACTATTACCTTTAAAAATATAGAAATATGTAATCTAGATTCTGTTTATCAATAGTAATTCTCTAAAGAATAACTTATAATTAACAATGTCCCAATTTTATTTCCTTCTCTGGATATTAGAAAATAATTAAAATTTCATTCTTTATATTTAGCTGTGTGTCTCATATAGAGTAATTATAAAAATGGACTGTACGTCACATACAAGATGGTGCTTAACCTGTTTTCATTTTTCTTTTTATTTTGCTCCAAATAAAAGATAACATCTCAATATTATAGCCTAACTCCATATAGAAATTATCTGCCTTGACATTATTAATCAATTTCTTTAAGTTTTCATCATATAACTAATAGTTGTTTTAATTAATTACTTTAAAGGACATTCCTATTTTTCTTAGGTTTTGTTATCTACTTACTGTTCCTTTTAGGACTAGCTTGAGGTAGTTATTTCAGTTATTTCCAGTAGGTACTAATGAGGTCATAAGTTCAAACTGCATATGGGCATATAAAAGTTATGGCGTGCAAACCTGGCCACCTGCTTTGTGAATATTTCATGTTAATTCCAGTGGCAATAGGGTTAAGGGTAGGAATAGGGCAGCAAAATGTACTCCACTACTGGAAAAACTCACATATATTCCCTACAGCATGAGACATAAATAGACATGAACAGTGGTTCAGAATGATAGACACTGAAGAGGATCACCTCATTCCTTCTTAACCCATTGTGTATGTCTTAGTTAATTTTGGGCTGCTATAGCAGAACACCTGAGCCTAGGTAATTTATAATGAAAAGAACGTATTGATTTATAGTTCTGGAGGTTGGGAAGTCCAATATCAAGGTACTGGCATCTTGCAAGGACCTTCTTGTAGCATCATTACGTGGCAGAAGGCATCACATGACAAGGCAAACATAGGGAGGGAGGAAGAGAGAGAGATAGAGAGAAAGATAACAGGGTCAAACTCACCCTTTTACAAGGAATCTACTCCTGCAATAATAGCATTATTTACTCATGAAGGTGGAGCCCTCATGCCCTAATCCTCTCTGAAACAGGTCCCTCTTAGTACTATTACAATGGCAATTAAATTTCTACAAGAAATTTGGAGGAGACAAACATTCAAACCATAGCAATATGTGATAGCTCATTAATCAGATGATTAAAGGAATTGATAATGCCAACTTTTAAAAATCTTTATTTTATTTTAATTTGTAACATATATAAGGAGTAAAAACATAAATGTGTGAATTAGTGAATACTTAAAATGTGAACTCTCATGCAATTCCTTCCATTTTCTTCAGCAGTTAAGAACTAGAATACGACTAGCACCCCAGAAGCCATAGGATCATTGATCATAATAACCTGCCTCTGGAAGTAACTTCTATCCTTATGTAATAATTGTTCCCCTGCCTTTCTTCATAATTTTGCCACATACTTGTTTGCCATAAATAATGTGGTTTAGTTTTACTACAATTGTAAACCATATAAATAGAATCATACTGTATGCCTGAATTATGGTTTATTTGGCTCAACATTATATTTATGAGAGTCACACTTGTGTGTAGCTATATCCTATATACATTCAATTTACTTTCATTGCTTTGCGAATATGCTTCATTTAAAAAAATCCATTCTATTACCGGTGGAGCTATTACGAATAATGCTGCTATGAACATTCTTATAGATATATCCAGAAGCACATGTGCATTACAATATAAAGAAATGGAATTTTAGAGTCATGGAATATGTTCATATAGCTGGTAAATGGCCCCTTCAGATTTGCTACCATATTTATTAGATTCCCCTACTACCCAATTCTACCCTACCCTAATTATACATGAGTATATATAAAAATAAACTGTAAATACTGTCCTACAATCTGTGTATTTTTACTTGATAATAGTTAAATACATTCTTAATAATAAAAATAATATACAATATTTATTGTATCCATGCATGGATCCAATAAATGTTATTTGGCAATTATCTACTGTGTATTTCGGGCTTTAAAAAATGATTTTCTATTATAAGTGTTAAATATAAGTAAAATGTTTTCTCCATATTAAAAAAAAATTCCTCAGTGTAAAATTGATGGGTTAAAGATAAAACATTTTTAAAGTATTCAGAAAAATTAGCATAGTTTATTCAACAATAATTTATAAAATTACCTATTTTCTAGAAAAGGTCACCTATTTTAGTATTAAATATAAATATTTTATGCTTATCAAATTTATAATAGAAAAGTATTCTATTCAGCATTTATCTAGTAATAATGAGACTAAATAATTTTTTGAAAATGTATTTTTTCAGTGTGTCATTATCTTTCAATGGTTAATATTTTTTGTGGTTTTTAAAAATTATCTAGTGGTTTAAAATTTATGTAGAAAGCCATTTATTTTCCTTCATGATCTTTGCTTTTGGCATGTAATCCCTAAGATTATATGGCTATTTACCCATACATTTTTTAAGCAATTTTGAAATCTCTTATTCCCAGGCTGCTACATTACAAAACTTAATAGAGCTTGATCTCATAATACCATATTCATTGCTTTCAATTATTACTCTGTCTGGAAACTATATTAACGTATGGTGAGTATTTTGCTATTTAATTTTTTCAAGTGGTTAAAACTTGTCTAAATACCAATAATTAAATAGTTATTTTCACTATTGTTATTATATGATCTTATATACTAAGTTTGTCTCTGAATATTTTATTTTTTTCATTGATTTATTTATTCCTGAGTCAGGAATATATATATTAACCTCTAGTTGGAAAAGTTTCCTTAATTTTATTCTTTTTCAGCATTTCTTTTTATTAGTCGTTCTTTAACATAAATTTTATAGTCAATTGTCAAGCTCCAAAATATTATCTCATGGTATTTCAGTTGGTAATACATTAAATTTGCAGGTACACTTTAAAAAATTTACAGATTTACAGTGTTGAATTTTCTCAACCAGGAACATTATTAGTCTTTTTGGTTATTCAAGTCTCATAATTCTTGACACTGAATATTTTATTTAAAGTATCAGTAAGATTTAGAAAACATACTTAAGTCTTTAAGTATATTCTGAATAAAAATGAAGCTAACCATATACTGTCTTTTATTTTGATTTGGAATAAACAAAATGATGAGAGGAGAAATCTCAAACCAAATGTATTAAATATATTTTATTCCTGCGGGTGTGTTTTTCAGCAAAATGCTATTACAAAGTAAGCTTTTATAGATAATCCTTAAAATATTGTTTGGTAAAGCCACATAGAACAAAACATTAAGAAACAAATTTGCTCTACCAAATCACTGATAAATAAATGATTGCTCTAATTGCAAACACTACAATAAAGGAAAATAGACAGATACATGGGACTCACTCTAATTTCCTAAAGATTAAAGATTAGAAACCACTAAAGAGACAAGATCAGCCAATGCTCCATTATATCCAGCTGGTTTGCCTTCATGTGTAATGTCAAAATAGGGTAATGAGTGATATACAAATATACCCAAACACACAAAAAAACAGCAAGCCTCAGCAGAAGCACAGATATCAGGAAAAGACTGCCAAGATTTCAAATATTGAAATGATTAAGTTAGAGTATAGAACAACTATGTTAACATGTTTAAAGAAGGAAAAAACAGATAATAAGAAACATTCACCTAGGGCATTAAAAAAACAGGAATATGAAGGGCAAAAATATTAACAACCCAAATTAAAGAGAAGTCAATGGAAGTATAGCATTCAGACGGAAATGTGCAGAGCTTCATTTTGGACATGAAAACACATGAAGATGTCTATTATACATCCAGGTATAGATGTCAAGTAGTCTGTGACTGAATATGGAGTTCACCTGAGAGGTCCAAACTACAGATGCTAATTTGGGAGTCAATGTGGCGGTCTGTTTCTCTTCATATACAATTAGGGTCTCAGTGCATAGTAGTGGGAAGGAAGAGATTTGTTTCCTCTGTGTCTTGTGTTTTCCAGACAGTTAACTTAGAAAGAAAGAAAGGCTTGGGTATTTGGGAGTATAAGGAAAAGAATGATGAGTATAACCTGGTGAATTAGTAGAACTGTGGAAAGTCCTGTGCCTTTTCTTCAAATATGCTGTGAAGACTTGATGCCTGGAGCTGCAGCCATCTTGAGACAACAAGGAGAAAACCAGAGAATTGGGAAATCCATCCTTGTATTTTTGAACAGTGGAATTAATAACAACAGGTGCTAACTTTTAGCATTCTTGTTTTGTGAGAAAAAGTGTCCCTTAATTTGAAAGTCAAGTTGGTTTAATTTCTGATTACTTGCGATCTAAGAAAATCCTAACTACAAAAGACATGAAGGATGGAGCATAAAAAATATGGCAGCTCTTACACCAAAACTAATCCTCACATTAATGGTAACCTTAGCTGTAGCCATAACTAATTTAATTGCAATGTTCATATGAAAATAAAATTACAAAAAATAGTTTCCATAAAAAATCTTTTTAAAAATTGGGGCATCTAGCCATACCAGATATATATTAAAAAGTTAAGGATCTTTTAAAATTCATACTGTGTGGTATTGTCATACAAATAGAAAGTTTGGTCAATGGTACAGAAAGAAACTCCAGAAGTCATCTCAACTTTGTACGGAAATTTAGTTTTTTGTGAAATTAACATCTTCAATCAGAGAAAAAGTGTTACCGTTTAATAAATGATGTTGGGACAATTGGATGGCTAATTATTAATACAAAGAGTCGAAACTGGATCTGTACCAGGCTGGATAAACTCAAGATAAATGGAAAACCTAAATATAAAAAGAGGAACCATTAATAAAAAACTCAAGTAAAACATAGGTGCAATCTTTTTTCTGATAATAAGGAAAACTTTCCTAACTATTGACTTAAAATTGAGAAGTAATGAAAGATTGATAAATATGTTTAGACAAAAATGAAAATTAGTAAACAAACCAATACTTAAAAACATAAAAATTGAAAACAAACTGAAATAAATGAAACTGTGTATCAAATTGCTGACATAAGAAAATGGAGAAAAAGATTATTTCAAGTAACTTTACAATGAAGAATTTTTCCTATACTTCCATGATATCTTTAATTTCTTAGCAAGACATCAAAGTAACATAAATATAAACATCAAAATATAAACATCAAAATAACATAAAGTGAATAAGTAAAGTTTTTAACTACAAGGCATTTTGTACCTGTCTACCAACCTATCCCAACTGAGTCCTAAGAACATAGTTAAACCCCTTGTTTAACATCAAATATAACATCAAAATAACATAAAATGAATAAGTAAAGTTTTTAACTACAAGGCATTTTGTACCTGTCTACCAACCTATCCCAACTATGAGTCCTAAGAACATAGTTAAACCCCTTGTTTTTATGAATAACAAACTTTATGCTCTTATGCAGGCTACTTAGCATGTCTGCACTTTAATTTTCTTGACTACAAAATATGAATTAGGTACTAAGATAAAGCAATTTATGGCTTTGAAGTAAATAATTCTTTAGGAACTTTCCGTTTCTAGAAAGTACATAAGTCTTAATTTGATCTCATAATCATTGGTTCTTTTTTAAAATAATTTCAACTTTTATTTTAGATTCAAGGGATACATGTGCAGGTTTGTTACATGGGTAACATGGGAATATCACGTGATGCCGAGGTTTTGGGTATGATTGATTCCATCAACCAGGTAGTGAGCATAGTACCCAAGAATTTTTCCACCTTTGCCCCCTTGCATTCCTCCCCACCCTTAGTAGTCCTCAGTTTCTATGAGTAGTCAGTGTTTAGCTGCCAGTTAGAAATAAGAACATGTGGTATTTGTTTTTCTGTTCCTATGGTTCCCTTAAGATAACGGCCT	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_3717:HG2_PB_pbsv_4841:HG4_PB_pbsv_4874:HG3_PB_pbsv_4726:HG2_PB_SVrefine2Falcon1plusDovetail_8953:HG3_PB_SVrefine2Falcon1Dovetail_3001:HG2_10X_SVrefine210Xhap12_3543:HG2_PB_SVrefine2PBcRplusDovetail_8325:HG2_PB_SVrefine2PB10Xhap12_3529:HG2_PB_SVrefine2Falcon2Bionano_2336:HG2_PB_PB10Xdip_21315:HG2_Ill_SVrefine2DISCOVARplusDovetail_9732:HG4_PB_SVrefine2PBcRDovetail_2466:HG4_PB_SVrefine2Falcon1Dovetail_2972:HG3_PB_SVrefine2PBcRDovetail_2203:HG3_Ill_SVrefine2DISCOVARDovetail_3754;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9732:HG2_PB_PB10Xdip_21315:HG2_PB_SVrefine2Falcon2Bionano_2336:HG2_PB_SVrefine2PB10Xhap12_3529:HG2_PB_SVrefine2PBcRplusDovetail_8325;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0473722;ClusterMaxSizeDiff=0.0470532;ClusterMaxEditDist=0.203011;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=6121;DistBack=-3;DistForward=8345;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:121137441-121137437;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9997;PctRecOverlap=0.9995;SizeDiff=-2;StartDistance=2;EndDistance=4;GTMatch=0;TruScore=99;MatchId=4128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:133:1/1:0:22:1:35:./.:0:0:0:0:1/1:0:32:1/1:0:442:.:.:.
chr4	121582256	HG4_PB_pbsv_4875	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGGGCCCAGGCGGACTGCGGATGCAGTGGCGCAATCTGCGCTTACTGCAAGCCTCCGCTTCCCGGGTTCACGCCATTCCTCTCGCCCAGCCTCCCGAGTTAGCTGGGACTACAGGCCCCCGCGCACCCCCGCGCCCGGGCTAATTTTTTGTAATTTTTAGTAGAGAACGGGGTTTTCACCTTGTTAGCCAGGATGGTCTCGATCCTCCTGACTCTCATGATCCACGTCGCCCTCGGCCCTCCCAAAGTGCGGGATTAAGGCGGTGATGCCACGCGCCCGTCCTACTGCTTTGTC	20	PASS	ClusterIDs=HG2_PB_HySA_9100:HG2_PB_pbsv_4843:HG4_PB_pbsv_4875:HG2_Ill_breakscan11_3478:HG2_PB_SVrefine2Falcon2Bionano_2337:HG4_PB_SVrefine2Falcon1Dovetail_2973:HG2_PB_SVrefine2Falcon1plusDovetail_8954:HG4_PB_HySA_7247;NumClusterSVs=8;ExactMatchIDs=HG4_PB_pbsv_4875;NumExactMatchSVs=1;ClusterMaxShiftDist=0.133127;ClusterMaxSizeDiff=0.130031;ClusterMaxEditDist=0.204334;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=343;DistBack=9601;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:121582257-121582257;PctSeqSimilarity=0.9499;PctSizeSimilarity=0.9592;PctRecOverlap=0.9446;SizeDiff=14;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=95;MatchId=4129.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:./.:17:6:4:9:./.:0:0:0:0:0/1:21:5:0/1:5:12:.:.:.
chr4	121924615	HG2_Ill_GATKHCSBGrefine_3279	G	GCAAGACAGACTTTACAAAAAATAAAAAATGAGTCAGGTGTGGTGGTGCACAGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3545:HG2_PB_pbsv_4845:HG3_PB_HySA_7457:HG4_PB_pbsv_4877:HG4_Ill_manta_1219:HG4_PB_HySA_7249:HG2_PB_PB10Xdip_21316:HG4_Ill_Krunchall_7208:HG4_Ill_GATKHC_8180:HG4_Ill_GATKHCSBGrefine_3421:HG4_Ill_250bpfermikitraw_6829:HG4_Ill_150bpfermikitraw_6530:HG3_Ill_manta_1125:HG3_Ill_Krunchall_6802:HG3_Ill_GATKHC_8111:HG3_Ill_GATKHCSBGrefine_3262:HG3_Ill_250bpfermikitraw_6558:HG3_Ill_150bpfermikitraw_6389:HG2_Ill_Krunchall_6933:HG2_Ill_GATKHC_8121:HG2_Ill_GATKHCSBGrefine_3279:HG2_Ill_250bpfermikitraw_6779:HG2_Ill_150bpfermikitraw_6319:HG2_PB_HySA_9103:HG4_PB_SVrefine2PBcRDovetail_2468:HG4_Ill_SVrefine2DISCOVARDovetail_3722:HG3_PB_SVrefine2PBcRDovetail_2205:HG3_Ill_SVrefine2DISCOVARDovetail_3758:HG2_PB_SVrefine2PBcRplusDovetail_8327:HG2_PB_SVrefine2PB10Xhap12_3531:HG2_PB_SVrefine2Falcon1plusDovetail_8956:HG2_Ill_SVrefine2DISCOVARplusDovetail_9735;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6319:HG2_Ill_250bpfermikitraw_6779:HG2_Ill_GATKHCSBGrefine_3279:HG2_Ill_GATKHC_8121:HG2_Ill_Krunchall_6933:HG3_Ill_150bpfermikitraw_6389:HG3_Ill_250bpfermikitraw_6558:HG3_Ill_GATKHCSBGrefine_3262:HG3_Ill_GATKHC_8111:HG3_Ill_Krunchall_6802:HG3_Ill_manta_1125:HG4_Ill_150bpfermikitraw_6530:HG4_Ill_250bpfermikitraw_6829:HG4_Ill_GATKHCSBGrefine_3421:HG4_Ill_GATKHC_8180:HG4_Ill_Krunchall_7208:HG4_Ill_manta_1219;NumExactMatchSVs=17;ClusterMaxShiftDist=0.110092;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.283186;PBcalls=11;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=53;DistBack=-50;DistForward=30;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=106;REFWIDENED=4:121924561-121924666;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:1:19:0:27:./.:0:0:0:0:0/1:6:35:./.:.:.:.:.:.
chr4	124830004	HG2_10X_SVrefine210Xhap12_3557	T	TAGTTAATGCCACTGAACTGTATACATAAAATGATTAAAAAGTAAATTTTATGTTATATATATTTTACCACAATAAAAAGGTTTTTTAAAAAGAAGAAAATATAATTGAATTACTTTTAGTTAAGTTTAAATAATGGGCATTAGAGCCATAGCTTGGATTTCTGAATGTAATAAAATTCTAAATGAAAAATAATAATTAGATCTTGTTATTGCATTTCCATTTGGCAAGTAATTTTTGTGTTCCTTTTTCCAGTGGCAATTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3557:HG2_PB_pbsv_4852:HG4_PB_HySA_7265:HG3_PB_pbsv_4734:HG3_PB_HySA_7469:HG2_PB_HySA_9126:HG4_PB_pbsv_4885:HG2_PB_PB10Xdip_21344:HG4_PB_SVrefine2PBcRDovetail_2473:HG4_PB_SVrefine2Falcon1Dovetail_2979:HG3_PB_SVrefine2Falcon1Dovetail_3006:HG2_PB_SVrefine2PBcRplusDovetail_8333:HG2_PB_SVrefine2PB10Xhap12_3536:HG2_PB_SVrefine2Falcon2Bionano_2343:HG2_PB_SVrefine2Falcon1plusDovetail_8962:HG2_Ill_SVrefine2DISCOVARplusDovetail_9742;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3557:HG4_PB_SVrefine2PBcRDovetail_2473:HG4_PB_SVrefine2Falcon1Dovetail_2979:HG3_PB_SVrefine2Falcon1Dovetail_3006:HG2_PB_SVrefine2PBcRplusDovetail_8333:HG2_PB_SVrefine2PB10Xhap12_3536:HG2_PB_SVrefine2Falcon2Bionano_2343:HG2_PB_SVrefine2Falcon1plusDovetail_8962:HG2_Ill_SVrefine2DISCOVARplusDovetail_9742;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0855019;ClusterMaxSizeDiff=0.0594796;ClusterMaxEditDist=0.292419;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=261;DistBack=132313;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=253;REFWIDENED=4:124830005-124830257;PctSeqSimilarity=0.9982;PctSizeSimilarity=1;PctRecOverlap=0.9349;SizeDiff=0;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=97;MatchId=4131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:141:1/1:2:32:0:28:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr4	127482422	HG4_Ill_scalpel_4713	C	CTATATATATATGTTTAATATATATTTTTATATATATTAAATATATATATAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6357:HG4_PB_HySA_7277:HG2_PB_HySA_9149:HG4_PB_pbsv_4895:HG4_Ill_scalpel_4713:HG2_PB_pbsv_4863:HG4_Ill_SVrefine2DISCOVARDovetail_3735:HG2_Ill_scalpel_4813:HG2_Ill_SVrefine2DISCOVARplusDovetail_9750:HG2_Ill_Krunchall_6981:HG2_Ill_GATKHC_8172:HG2_Ill_GATKHCSBGrefine_3295:HG2_Ill_250bpfermikitraw_6818;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6357:HG4_Ill_scalpel_4713:HG4_Ill_SVrefine2DISCOVARDovetail_3735:HG2_Ill_scalpel_4813:HG2_Ill_SVrefine2DISCOVARplusDovetail_9750:HG2_Ill_Krunchall_6981:HG2_Ill_GATKHC_8172:HG2_Ill_GATKHCSBGrefine_3295:HG2_Ill_250bpfermikitraw_6818;NumExactMatchSVs=9;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.261682;PBcalls=4;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=40180;DistForward=34;DistMin=34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=4:127482423-127482482;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:0|1:27:3:0:16:./.:0:0:0:0:0/1:15:19:./.:.:.:.:.:.
chr4	127514851	HG2_PB_SVrefine2Falcon1plusDovetail_8970	T	TAAAACTTCACACAGAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_4897:HG4_Ill_MetaSV_3888:HG2_PB_pbsv_4865:HG4_Ill_GATKHCSBGrefine_3435:HG2_PB_SVrefine2PB10Xhap12_3547:HG2_PB_SVrefine2Falcon1plusDovetail_8970:HG2_Ill_MetaSV_3707:HG2_Ill_GATKHCSBGrefine_3297:HG4_PB_HySA_7280:HG2_PB_PB10Xdip_21362;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3297:HG2_Ill_MetaSV_3707:HG2_PB_SVrefine2Falcon1plusDovetail_8970:HG2_PB_SVrefine2PB10Xhap12_3547:HG4_Ill_GATKHCSBGrefine_3435:HG4_Ill_MetaSV_3888;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0775194;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.221374;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=124;DistBack=7494;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:127514852-127514866;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4134.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:35:0|1:35:5:4:22:./.:0:0:0:0:0/1:33:9:./.:.:.:.:.:.
chr4	128847470	HG4_Ill_GATKHCSBGrefine_3437	A	ATCCAGGCCAACATGGTGAAACCTTGTCTCTACTAAAAATACAAAAATTAGCTGGGTGGGGTGGCACACATCTGTAATCCCAGCTACTCAGACTCGGGAAGTTGAGGCAGGAGAATGGCTTGAACCTGGGAGGTGGAGGTTGCGGTGAGCCAAGATCGCGCCATGGCACTCCACCCTGGGCAACAAGATGAAACTCCATAAAAAAAAAAAAAAAAGTATAATAATAAAAAAAAAAGAAAAATATAGCAGAAAGGAAAATGTCTTCAAAACACCAGTGATGCAATCACTAAGATCCAAAATGTGGGAAACTATAGTTCAAAAATCCTGGTTTCTTCAATTTGTAAGAGGAAAAGAGAAAAAAAAAACAGAGATGGAGAAGAAACTTATTGATTAAAAGAGACTTAAGAAACTTAAGAGCCTGAGTCTAGTGAACATACTGAAAAACAAATACAACAAAACAAAGCCAAAAAACACTTGAGACAGTGGAGAAAATGTGAATGCTACCTGAATATGTGATGATATTAATAAGTCACTTTTTTGGATGAGATAATATCATTAACTTTAGAGACACATACTGAAATATTTATGGAAGATATGAAATGATGCCTAGGATCAGCTTCAAAATAATCCAGGTACAGGGGAAAGAGAGTGTGGAATAGCTAGAGGTAGAGATGGAACAGGATTGTCTAGGTGCTTATAATTGTTGAAGCTGGGTAATGGATATTGGAGATTCAGTACATGATGCTCTCTAGACTTTGGTATATGTTGGAAATTCTGCATAACAGTAAAACATAAAAACAAAACCAATGTCTTCCAAAATACATGCATAAAAACCAAACAACCAAACAACCAACAAAAACCCAATGACTTCCATTGCCCTCGGAATACCAACAGGCTTCACATCTTTCTAACCTAATTTATCATTTGCCTTTTCCCTCACTCTGCTCTTGTCAAATCAGCCTTTCTGCTTGTTCCTTAAACACACAAAGCTCAGCCTTCCCGAGGAAGAGAGT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3013:HG2_PB_pbsv_4868:HG4_PB_pbsv_4901:HG2_Ill_breakscan11_3480:HG2_PB_HySA_9158:HG4_PB_SVrefine2Falcon1Dovetail_2984:HG2_PB_SVrefine2Falcon1plusDovetail_8972:HG4_PB_SVrefine2PBcRDovetail_2479:HG4_Ill_SVrefine2DISCOVARDovetail_3739:HG4_Ill_MetaSV_3889:HG4_Ill_GATKHCSBGrefine_3437:HG2_Ill_MetaSV_3708:HG2_10X_SVrefine210Xhap12_3571:HG2_Ill_GATKHCSBGrefine_3299;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3571:HG2_Ill_MetaSV_3708:HG4_Ill_GATKHCSBGrefine_3437:HG4_Ill_MetaSV_3889:HG4_Ill_SVrefine2DISCOVARDovetail_3739:HG4_PB_SVrefine2PBcRDovetail_2479;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0907745;ClusterMaxSizeDiff=0.0897879;ClusterMaxEditDist=0.17678;PBcalls=7;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1012;DistBack=-13;DistForward=1;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=4:128847471-128847479;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:37:./.:17:8:1:8:./.:0:0:0:0:0/1:21:16:0/1:37:54:.:1044:.
chr4	131437998	HG2_10X_SVrefine210Xhap12_3581	T	TTAATTATTTATAATAATTAAATAATTATTTAATTATTATAAATAATTAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3481:HG2_PB_pbsv_4878:HG4_PB_pbsv_4913:HG2_PB_HySA_9183:HG4_PB_HySA_7317:HG4_PB_SVrefine2PBcRDovetail_2487:HG4_Ill_svaba_6404:HG4_Ill_scalpel_4734:HG4_Ill_SVrefine2DISCOVARDovetail_3749:HG4_Ill_Krunchall_7285:HG4_Ill_GATKHC_8258:HG4_Ill_GATKHCSBGrefine_3447:HG4_Ill_FB_4570:HG4_Ill_250bpfermikitraw_6900:HG4_Ill_150bpfermikitraw_6600:HG2_PB_SVrefine2Falcon2Bionano_2350:HG2_Ill_svaba_6284:HG2_Ill_SpiralSDKrefine_12693:HG2_Ill_SVrefine2DISCOVARplusDovetail_9765:HG2_Ill_Krunchall_7017:HG2_Ill_GATKHC_8204:HG2_Ill_GATKHCSBGrefine_3309:HG2_Ill_FB_4499:HG2_Ill_250bpfermikitraw_6855:HG2_Ill_150bpfermikitraw_6389:HG2_10X_SVrefine210Xhap12_3581;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3581:HG2_Ill_150bpfermikitraw_6389:HG2_Ill_250bpfermikitraw_6855:HG2_Ill_FB_4499:HG2_Ill_GATKHCSBGrefine_3309:HG2_Ill_GATKHC_8204:HG2_Ill_Krunchall_7017:HG2_Ill_SVrefine2DISCOVARplusDovetail_9765:HG2_Ill_SpiralSDKrefine_12693:HG2_Ill_svaba_6284:HG2_PB_SVrefine2Falcon2Bionano_2350:HG4_Ill_150bpfermikitraw_6600:HG4_Ill_250bpfermikitraw_6900:HG4_Ill_FB_4570:HG4_Ill_GATKHCSBGrefine_3447:HG4_Ill_GATKHC_8258:HG4_Ill_Krunchall_7285:HG4_Ill_SVrefine2DISCOVARDovetail_3749:HG4_Ill_scalpel_4734:HG4_Ill_svaba_6404:HG4_PB_SVrefine2PBcRDovetail_2487;NumExactMatchSVs=21;ClusterMaxShiftDist=0.134615;ClusterMaxSizeDiff=0.115385;ClusterMaxEditDist=0.169811;PBcalls=6;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=50;DistBack=32041;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=4:131437999-131438008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4136.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:26:0|1:43:3:5:23:./.:0:0:0:0:0/1:26:32:./.:.:.:.:.:.
chr4	131699881	HG2_10X_SVrefine210Xhap12_3584	G	GGGAAGGAGGAAGGGAGGGAGGAAGGAAAGAAGGAAGGAAGCAAGGCAGGAAGGAAGGCAGGAAGGCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3584:HG2_PB_HySA_9192:HG4_PB_pbsv_4917:HG2_PB_SVrefine2Falcon2Bionano_2352;NumClusterSVs=4;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3584:HG2_PB_SVrefine2Falcon2Bionano_2352;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0431655;ClusterMaxEditDist=0.172662;PBcalls=3;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=67;DistBack=4822;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=64;REFWIDENED=4:131699882-131699945;PctSeqSimilarity=0.968;PctSizeSimilarity=0.9853;PctRecOverlap=0.3913;SizeDiff=-1;StartDistance=-41;EndDistance=-41;GTMatch=0;TruScore=78;MatchId=4137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:27:1|0:6:19:26:6:./.:0:0:0:0:0/1:17:14:./.:.:.:.:.:.
chr4	132181647	HG4_PB_SVrefine2PBcRDovetail_2492	T	TGGGATGGGCATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATGCTTTTGGTGTTTTGGACATGAAGTCCTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCATTGCTTGTTTTTCTCAGGTTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCATATGAACTTTAAAGTAGTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTTGCCAGTATTTTATTGAGGATTTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTGGTTGTGTCTCTGCCTGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAGAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATCTCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCATCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCAGAGGTGGAGCCTACAGAGGCAGTCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGTTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3482:HG2_PB_PB10Xdip_21402:HG3_PB_SVrefine2Falcon1Dovetail_3023:HG2_PB_SVrefine2PB10Xhap12_3566:HG4_PB_SVrefine2PBcRDovetail_2492:HG4_PB_SVrefine2Falcon1Dovetail_2995;NumClusterSVs=6;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_2492;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0141208;ClusterMaxSizeDiff=0.0141208;ClusterMaxEditDist=0.0181078;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=6058;DistBack=1;DistForward=28244;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:132181648-132181662;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9984;PctRecOverlap=0.9984;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:28:./.:23:9:2:13:./.:0:0:0:0:0/1:18:7:0/1:192:634:.:6006:.
chr4	133117829	HG2_PB_SVrefine2PB10Xhap12_3571	T	TAATAGCACTTAAGACGGATAAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTATAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3000:HG2_PB_HySA_9204:HG2_PB_pbsv_4890:HG3_PB_pbsv_4758:HG3_PB_assemblyticsfalcon_19990:HG4_PB_assemblyticsfalcon_19610:HG3_PB_HySA_7529:HG2_Ill_MetaSV_3715:HG2_PB_SVrefine2Falcon2Bionano_2357:HG2_PB_SVrefine2PB10Xhap12_3571:HG2_PB_PB10Xdip_21415:HG2_PB_SVrefine2Falcon1plusDovetail_8985:HG3_Ill_MetaSV_3886:HG2_PB_SVrefine2PBcRplusDovetail_8355:HG3_PB_SVrefine2Falcon1Dovetail_3026;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3571;NumExactMatchSVs=1;ClusterMaxShiftDist=0.262895;ClusterMaxSizeDiff=0.25624;ClusterMaxEditDist=0.32282;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=262;DistBack=3470;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:133117830-133117831;PctSeqSimilarity=0.8991;PctSizeSimilarity=0.8162;PctRecOverlap=0.8193;SizeDiff=-59;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=84;MatchId=4140.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:43:0|1:35:0:1:28:./.:0:0:0:0:./.:41:4:./.:.:.:.:.:.
chr4	133537879	HG2_Ill_SVrefine2DISCOVARplusDovetail_9772	G	GCAAAGACTTGGAACCAACACAAATGTCCATCAATGATAGACTGGATAAAGAAAATGTGGCACATATACCCCATGGAATACTATGCAGCCATAAAAAAGGATCAGTTCATGTTCTTTGCAGGGGCATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTAACACAAGAACAGAAAACCAAACACTGCATGTTCCCACTCATAAGTGGGAGTTGAACAATGAGAACACATGGACACAGGGAGGAGAACATCACACACTGGGGCCTGTCGGGGGTTGGGGGGTAGGGAAGGGATAGCATTAGGAGAAATACCTAATGTAGATGACAGGTTGATGGGGGCAGCAAACCACCATGGCATGTGTATACCTATGTAACAAACCTGCATGTTCTGCACATGTACCCCAGAACTTAAAGTATAATAATAATAATAAACAAGGCTGAAGGACATCAACAATCAACCTTTGGAGAAAATAAAAATAATAATGGAGAATGAAAAATAAAAGTTAAGATGAAAATGGCACTGATACAGTTCCATTAATGCATTTGGACAGATTGAAATTTATTTTTAATGAAGAGGATAAACAAGAGAACAGGGATCTAAGCTTTTAAATTGTATTTGATAAGTTGATAGATATATCAAACAGTAAGGTAAAGATACCTGTAAAAAAGTATAAATAGACAAGAAATCAGAAAAAAAACTGGATACTTTTCTTTGAATGTGACTAAATATCACTATGGCCTGATAACTGCAGAGAAAACTATGCTAAAAACACAGTTATAAATGTTAGAGAAATGGATATCAGAAGTAATATGTTTAAGCAAAGAGCAAATCTTTAAAGAAAGGCTAAGTATAAAAGAATAGAAAACAAAGTTACCCAAAAGAGTTTCCCAGAGTATTTATGTTACTGTGATGCCATTAACCTATTCAAACATGTACCAAAAAAAGAGACAAATTATGGGCTATCCAAGTCTAGACAATCAAAATTGTATGCTGTTACAGCTGTGCACTATACACTAGCTAATTGTCCACCAACACACAGTCACTAGATCCATTTTTGCTGACATCTTAATTTGTTGCTATAGCTTTAGGAATTTCTCACTGATGCACATTCACTGGGCTTATGACCTACAGTAGGATGTTTTATTTAGTTAAATTTATTATTTTCTACGAGTTTCTTATCTGAAAACCAAAGGCAACACTTTCCACTCTTTTTATATCTCCACATAGTTCTTAATACACCTTCATTTTACACTTTCATAATTTACCATAATACACATCTGTGTTAACTTCTAAACCCATCTTTATTTGTAAGATAGATTGAACTAGATAAGTCTATATTTTATGTTTCTTTGTTTGAAATTCAAATGAGTTTTAAGTCCTTAAGATATATCTGTATATATTTGTATATACAAACACATGTTCATTTGTTTTTATGTAGAAATTGAAAAGTAATTTTTCGGGTACAGCTAACAGCACCACCTCTAACATGAAAGTTGATAACTAATTCACTGATCTCATAACTCTGCAATTTCCTAAACACAGGATAACTTCATCAGAATAATATTTTCCTACCTTCCTTATTATCTATATCATAGACAACATCATCTACAAAAACCGGTCCAATAAAGATGATTTTCACTTTAGAGTGTATGATCTTTCCAACTC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_3794:HG2_PB_pbsv_4893:HG4_PB_pbsv_4926:HG3_PB_HySA_7534:HG2_PB_PB10Xdip_21417:HG2_PB_SVrefine2PBcRplusDovetail_8356:HG3_PB_HySA_7533:HG4_PB_HySA_7332:HG4_PB_SVrefine2PBcRDovetail_2496:HG2_Ill_SVrefine2DISCOVARplusDovetail_9772:HG2_PB_SVrefine2PB10Xhap12_3572:HG2_PB_SVrefine2Falcon1plusDovetail_8986:HG4_PB_SVrefine2Falcon1Dovetail_3001:HG3_PB_SVrefine2Falcon1Dovetail_3027;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9772:HG4_PB_SVrefine2PBcRDovetail_2496;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0581884;ClusterMaxSizeDiff=0.0575885;ClusterMaxEditDist=0.158451;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=1664;DistBack=32120;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=439;REFWIDENED=4:133537880-133538318;PctSeqSimilarity=0.9947;PctSizeSimilarity=1;PctRecOverlap=0.8048;SizeDiff=0;StartDistance=-325;EndDistance=-325;GTMatch=0;TruScore=93;MatchId=4141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:57:0|1:30:0:3:41:./.:0:0:0:0:0/1:18:15:0/1:52:86:.:1537:.
chr4	133823804	HG2_Ill_scalpel_4857	C	CAAAGTGTAGTAACTCATTTTAGTATATATATATATATATATATATATATATA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_21421:HG3_PB_HySA_7539:HG2_PB_HySA_9211:HG4_Ill_250bpfermikitraw_6924:HG4_PB_pbsv_4929:HG3_Ill_scalpel_4930:HG3_Ill_manta_1143:HG3_Ill_Spiral_5406:HG3_Ill_GATKHCSBGrefine_3303:HG3_Ill_GATKHC_8219:HG3_Ill_250bpfermikitraw_6644:HG3_Ill_150bpfermikitraw_6476:HG4_Ill_svaba_6423:HG2_PB_pbsv_4896:HG4_Ill_scalpel_4753:HG4_Ill_manta_1233:HG4_Ill_Krunchall_7315:HG4_Ill_GATKHC_8289:HG4_Ill_GATKHCSBGrefine_3458:HG4_Ill_150bpfermikitraw_6618:HG3_Ill_svaba_6419:HG2_Ill_svaba_6305:HG2_Ill_scalpel_4857:HG2_Ill_manta_1386:HG2_Ill_Krunchall_7045:HG2_Ill_GATKHC_8236:HG2_Ill_GATKHCSBGrefine_3323:HG2_Ill_250bpfermikitraw_6879:HG2_Ill_150bpfermikitraw_6410:HG2_PB_HySA_9210:HG4_PB_HySA_7334:HG3_PB_pbsv_4764;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6410:HG2_Ill_250bpfermikitraw_6879:HG2_Ill_GATKHCSBGrefine_3323:HG2_Ill_GATKHC_8236:HG2_Ill_Krunchall_7045:HG2_Ill_manta_1386:HG2_Ill_scalpel_4857:HG2_Ill_svaba_6305:HG3_Ill_svaba_6419:HG4_Ill_150bpfermikitraw_6618:HG4_Ill_GATKHCSBGrefine_3458:HG4_Ill_GATKHC_8289:HG4_Ill_Krunchall_7315:HG4_Ill_manta_1233:HG4_Ill_scalpel_4753:HG4_Ill_svaba_6423;NumExactMatchSVs=16;ClusterMaxShiftDist=0.233333;ClusterMaxSizeDiff=0.233333;ClusterMaxEditDist=0.33871;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:133823805-133823806;PctSeqSimilarity=0.9138;PctSizeSimilarity=0.8387;PctRecOverlap=0.8413;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=86;MatchId=4142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:71:1/1:6:33:4:30:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr4	134596422	HG2_Ill_manta_1388	T	TACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGTGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_9220:HG4_PB_pbsv_4935:HG4_PB_HySA_7342:HG3_Ill_GATKHCSBGrefine_3312:HG3_PB_SVrefine2Falcon1Dovetail_3036:HG3_PB_assemblyticsfalcon_20008:HG4_PB_SVrefine2PBcRDovetail_2502:HG3_Ill_MetaSV_3896:HG2_PB_SVrefine2PBcRplusDovetail_8361:HG2_PB_SVrefine2PB10Xhap12_3578:HG2_PB_SVrefine2Falcon2Bionano_2361:HG2_Ill_manta_1388:HG2_Ill_MetaSV_3719:HG2_10X_SVrefine210Xhap12_3594:HG4_Ill_MetaSV_3901:HG4_PB_SVrefine2Falcon1Dovetail_3010:HG4_PB_assemblyticsfalcon_19623:HG2_PB_SVrefine2Falcon1plusDovetail_8991:HG2_PB_pbsv_4901:HG3_PB_HySA_7548:HG2_PB_HySA_9221:HG2_PB_PB10Xdip_21448:HG2_Ill_breakscan11_3483:HG3_PB_pbsv_4771;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3594:HG2_Ill_MetaSV_3719:HG2_Ill_manta_1388:HG2_PB_SVrefine2Falcon2Bionano_2361:HG2_PB_SVrefine2PB10Xhap12_3578:HG2_PB_SVrefine2PBcRplusDovetail_8361:HG3_Ill_MetaSV_3896;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0723454;ClusterMaxSizeDiff=0.0723454;ClusterMaxEditDist=0.228833;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=418;DistBack=25714;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:134596423-134596423;PctSeqSimilarity=0.9988;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:2:20:1:21:./.:0:0:0:0:1/1:0:31:1/1:3:164:.:.:.
chr4	135130266	HG4_PB_pbsv_4938	G	GAAGGAATGCAAGAAGCCGCCGGGCGCGGCTGGGCTCACGCCATGTAATCCCAGCACTTTGGGAGCCGAGCGGGCGGATCCTGATCAGAAGATCAGAGACACATCCCATGGCTTAACACCCGTGAAAACCCCGTCTCTACTAAAAATACCAATAAATTACCGGCGGAGAGGGTGGCGGAGCGCCCTGTATCCCAGCTAACTCGCGTGCTGACCAGGAGAATGCGAGTGAAACCCCAGGGGCGAGCGCACGTGAGCCGAGATTGCGCCACTCACTCCAGCCTGGCGACACGGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8993:HG2_PB_pbsv_4904:HG4_PB_assemblyticsfalcon_19627:HG4_PB_pbsv_4938:HG4_PB_SVrefine2Falcon1Dovetail_3011:HG4_PB_SVrefine2PBcRDovetail_2503;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_4938;NumExactMatchSVs=1;ClusterMaxShiftDist=0.174051;ClusterMaxSizeDiff=0.164557;ClusterMaxEditDist=0.223201;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=338;DistBack=16;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:135130267-135130281;PctSeqSimilarity=0.9215;PctSizeSimilarity=0.9911;PctRecOverlap=0.9882;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=4144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:1|0:0:21:23:1:./.:0:0:0:0:0/1:24:4:0/1:11:12:.:.:.
chr4	135135338	HG4_PB_SVrefine2Falcon1Dovetail_3012	TCTTTCAGAATCA	GACTGGCTGGTGTGCTCTCCAAGGAATAGACTGGCCAATACAGACTCAAAGGATTTAAATTCTATTGTAATTCAACCACCTGGATACTCTTCTTAGATTGGCATATTCCTGTGTCATAACAATAATGACCATTTGTTCAATATATTACTCCCTCAGTCCCTGTATTGTTGCCCACCCCGACCAAAATAGCAGACATATGGATGTAGTTTTGTCTCTTATGTCCCTGGCCCTTATGGATTAAAGTTATGGTTCAAGTAGAGTATGATTGGGGAAAGGTGAATTTTTAGCTCCAGAATCGATACACAGCAATTCCATAGCAAAGGAAAGAGAAGAGCAAACTCAGTACCCGGGAATTATCTCAGAATTCAGAAATTATGGTGAAGAAAGGAAGATCAATGATAATTGTCTTTCAGAATCACCCTGAAGAGACTGC	20	PASS	ClusterIDs=HG2_PB_pbsv_4905:HG4_PB_assemblyticsfalcon_19628:HG4_PB_SVrefine2Falcon1Dovetail_3012:HG3_Ill_SVrefine2DISCOVARDovetail_3802:HG2_PB_SVrefine2Falcon2Bionano_2362:HG3_PB_assemblyticsfalcon_20011:HG3_PB_SVrefine2Falcon1Dovetail_3037:HG4_Ill_Spiral_410:HG3_Ill_Spiral_5416:HG2_PB_SVrefine2PBcRplusDovetail_8362:HG3_PB_pbsv_4773:HG4_PB_pbsv_4939:HG4_PB_HySA_7345:HG4_Ill_GATKHCSBGrefine_3468:HG3_Ill_GATKHCSBGrefine_3314:HG2_Ill_GATKHCSBGrefine_3330;NumClusterSVs=16;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_3012:HG4_PB_assemblyticsfalcon_19628;NumExactMatchSVs=2;ClusterMaxShiftDist=0.115802;ClusterMaxSizeDiff=0.111772;ClusterMaxEditDist=0.169611;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=420;DistBack=-13;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:135135351-135135337;PctSeqSimilarity=0.9802;PctSizeSimilarity=0.9667;PctRecOverlap=0.94;SizeDiff=14;StartDistance=3;EndDistance=15;GTMatch=0;TruScore=96;MatchId=4145.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:40:./.:19:10:3:23:./.:0:0:0:0:0/1:23:14:0/1:10:30:.:.:.
chr4	136507535	HG4_Ill_SVrefine2DISCOVARDovetail_3770	C	CTTGCTTCCCCTTCGCCTTCTGCCATGATTGTAAGTTTCCTGAGGCCTCACCAGCCATGTTCATCTGTGAGTCAATTAAACCTACTTCCTTTATAAATTACCCAGGCTCGGGCATTTCTTTATAGCTGTATAAACCATACTAATGCATACATTTAAGGAAAATATTTAGGTGAATTAAAGTATCTGGGGGTAAATAAGGTTTTTTAAATTAAACT	20	PASS	ClusterIDs=HG4_PB_HySA_7360:HG3_PB_assemblyticsfalcon_20026:HG2_PB_pbsv_4914:HG4_PB_pbsv_4949:HG2_Ill_breakscan11_3484:HG2_PB_HySA_9242:HG3_PB_SVrefine2Falcon1Dovetail_3044:HG4_PB_SVrefine2PBcRDovetail_2509:HG4_Ill_manta_1238:HG4_Ill_SVrefine2DISCOVARDovetail_3770:HG4_Ill_MetaSV_3903:HG4_Ill_GATKHCSBGrefine_3510:HG2_PB_SVrefine2Falcon2Bionano_2368:HG2_Ill_MetaSV_3722:HG2_Ill_GATKHCSBGrefine_3368:HG2_10X_SVrefine210Xhap12_3602;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3602:HG2_Ill_GATKHCSBGrefine_3368:HG2_Ill_MetaSV_3722:HG2_PB_SVrefine2Falcon2Bionano_2368:HG4_Ill_GATKHCSBGrefine_3510:HG4_Ill_MetaSV_3903:HG4_Ill_SVrefine2DISCOVARDovetail_3770:HG4_Ill_manta_1238:HG4_PB_SVrefine2PBcRDovetail_2509;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0613208;ClusterMaxSizeDiff=0.0566038;ClusterMaxEditDist=0.1513;PBcalls=8;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=214;DistBack=47263;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=4:136507536-136507542;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:31:0|1:45:2:0:29:./.:0:0:0:0:0/1:20:4:./.:.:.:.:.:.
chr4	136727572	HG4_PB_SVrefine2PBcRDovetail_2510	T	TAGACAAGGACATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3485:HG4_PB_pbsv_4950:HG4_PB_HySA_7361:HG2_PB_pbsv_4915:HG4_PB_SVrefine2PBcRDovetail_2510:HG4_PB_assemblyticsfalcon_19640:HG3_PB_assemblyticsfalcon_20028:HG4_PB_SVrefine2Falcon1Dovetail_3017:HG3_PB_SVrefine2Falcon1Dovetail_3045;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_2510;NumExactMatchSVs=1;ClusterMaxShiftDist=0.190909;ClusterMaxSizeDiff=0.187879;ClusterMaxEditDist=0.263636;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=44009;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:136727573-136727588;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:20:./.:26:4:9:9:./.:0:0:0:0:0/1:21:16:0/1:8:36:.:.:.
chr4	137235397	HG4_Ill_svaba_6454	C	CAAAGACACAGAATTCTACACAGCTTTGAGGTAGAAAATAACATACTGAGAAAACTGGGTTTCCCAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3486:HG2_PB_pbsv_4917:HG3_PB_pbsv_4785:HG2_PB_HySA_9248:HG4_PB_pbsv_4952:HG4_PB_assemblyticsfalcon_19645:HG4_Ill_svaba_6454:HG4_Ill_scalpel_4787:HG4_Ill_manta_1239:HG4_Ill_Krunchall_7344:HG4_Ill_GATKHC_8328:HG4_Ill_GATKHCSBGrefine_3511:HG4_Ill_Cortex_2750:HG4_Ill_250bpfermikitraw_6952:HG4_Ill_150bpfermikitraw_6648:HG3_PB_assemblyticsfalcon_20033:HG3_Ill_svaba_6449:HG3_Ill_scalpel_4956:HG3_Ill_manta_1148:HG3_Ill_Spiral_5429:HG3_Ill_Krunchall_6939:HG3_Ill_GATKHC_8252:HG3_Ill_GATKHCSBGrefine_3344:HG3_Ill_Cortex_2762:HG3_Ill_250bpfermikitraw_6667:HG3_Ill_150bpfermikitraw_6504:HG2_Ill_svaba_6338:HG2_Ill_scalpel_4884:HG2_Ill_manta_1393:HG2_Ill_SpiralSDKrefine_12741:HG2_Ill_Krunchall_7082:HG2_Ill_GATKHC_8271:HG2_Ill_GATKHCSBGrefine_3370:HG2_Ill_Cortex_6549:HG2_Ill_250bpfermikitraw_6910:HG2_Ill_150bpfermikitraw_6440:HG2_PB_PB10Xdip_21464;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6440:HG2_Ill_250bpfermikitraw_6910:HG2_Ill_Cortex_6549:HG2_Ill_GATKHCSBGrefine_3370:HG2_Ill_GATKHC_8271:HG2_Ill_Krunchall_7082:HG2_Ill_SpiralSDKrefine_12741:HG2_Ill_manta_1393:HG2_Ill_scalpel_4884:HG2_Ill_svaba_6338:HG3_Ill_150bpfermikitraw_6504:HG3_Ill_250bpfermikitraw_6667:HG3_Ill_Cortex_2762:HG3_Ill_GATKHCSBGrefine_3344:HG3_Ill_GATKHC_8252:HG3_Ill_Krunchall_6939:HG3_Ill_Spiral_5429:HG3_Ill_manta_1148:HG3_Ill_scalpel_4956:HG3_Ill_svaba_6449:HG3_PB_assemblyticsfalcon_20033:HG4_Ill_150bpfermikitraw_6648:HG4_Ill_250bpfermikitraw_6952:HG4_Ill_Cortex_2750:HG4_Ill_GATKHCSBGrefine_3511:HG4_Ill_GATKHC_8328:HG4_Ill_Krunchall_7344:HG4_Ill_manta_1239:HG4_Ill_scalpel_4787:HG4_Ill_svaba_6454:HG4_PB_assemblyticsfalcon_19645;NumExactMatchSVs=31;ClusterMaxShiftDist=0.115108;ClusterMaxSizeDiff=0.0719424;ClusterMaxEditDist=0.222222;PBcalls=7;Illcalls=30;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=29;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=67;DistBack=49800;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:137235396-137235398;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4148.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:66:1/1:0:23:2:14:./.:0:0:0:0:1/1:0:60:./.:.:.:.:.:.
chr4	138177324	HG3_PB_SVrefine2Falcon1Dovetail_3048	C	CAAGAAAGCTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTGTCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAACAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATAGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACATCAGTTAGAATGGCAATCATTAAAAAGTCAGGGAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_21468:HG4_PB_pbsv_4958:HG3_PB_pbsv_4789:HG2_PB_pbsv_4921:HG3_PB_assemblyticsfalcon_20040:HG4_PB_assemblyticsfalcon_19655:HG2_PB_HySA_9255:HG4_PB_HySA_7378:HG2_10X_SVrefine210Xhap12_3606:HG3_PB_SVrefine2PBcRDovetail_2244:HG2_PB_SVrefine2Falcon2Bionano_2372:HG2_PB_SVrefine2Falcon1plusDovetail_9001:HG3_PB_SVrefine2Falcon1Dovetail_3048:HG2_PB_SVrefine2PB10Xhap12_3588:HG4_PB_SVrefine2PBcRDovetail_2513:HG3_PB_HySA_7578:HG2_Ill_breakscan11_3487;NumClusterSVs=17;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_3048;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0571979;ClusterMaxSizeDiff=0.0571979;ClusterMaxEditDist=0.193776;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=1525;DistBack=-11;DistForward=-1;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=4:138177325-138177334;PctSeqSimilarity=0.999;PctSizeSimilarity=0.998;PctRecOverlap=0.9974;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4149.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:125:1/1:1:26:0:49:./.:0:0:0:0:1/1:0:25:1/1:17:431:.:1319:.
chr4	138211638	HG3_Ill_GATKHCSBGrefine_3349	A	ATATATATATATATATACACACATACACACACATATATAGTGTGTGTATAAATATATGTATATAT	20	PASS	ClusterIDs=HG3_PB_HySA_7579:HG4_PB_pbsv_4959:HG3_Ill_scalpel_4964:HG4_PB_HySA_7379:HG3_Ill_GATKHC_8262:HG3_Ill_GATKHCSBGrefine_3349:HG3_Ill_150bpfermikitraw_6512:HG2_Ill_manta_1397:HG2_Ill_GATKHC_8284:HG2_Ill_GATKHCSBGrefine_3375:HG2_Ill_250bpfermikitraw_6923:HG2_Ill_150bpfermikitraw_6452:HG4_Ill_manta_1242:HG2_PB_pbsv_4922:HG4_Ill_GATKHC_8343:HG4_Ill_GATKHCSBGrefine_3518:HG4_Ill_150bpfermikitraw_6661:HG3_PB_pbsv_4790;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6452:HG2_Ill_250bpfermikitraw_6923:HG2_Ill_GATKHCSBGrefine_3375:HG2_Ill_GATKHC_8284:HG2_Ill_manta_1397:HG3_Ill_150bpfermikitraw_6512:HG3_Ill_GATKHCSBGrefine_3349:HG3_Ill_GATKHC_8262:HG3_Ill_scalpel_4964;NumExactMatchSVs=9;ClusterMaxShiftDist=0.10687;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.294574;PBcalls=5;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=34299;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=80;REFWIDENED=4:138211631-138211710;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:29:1|0:6:29:35:0:./.:0:0:0:0:0/1:11:13:./.:.:.:.:.:.
chr4	138243865	HG2_PB_pbsv_4923	A	AGAAAAGAAGAAAAGAAGAAGAAATGAAGAAGAAAAGAAGAAAGAAGAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAGAAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGGAAG	20	PASS	ClusterIDs=HG4_PB_pbsv_4960:HG2_Ill_GATKHCSBGrefine_3376:HG4_PB_assemblyticsfalcon_19657:HG4_PB_HySA_7381:HG2_PB_pbsv_4923:HG4_Ill_GATKHCSBGrefine_3519:HG4_PB_SVrefine2Falcon1Dovetail_3018:HG2_10X_SVrefine210Xhap12_3607:HG4_Ill_SVrefine2DISCOVARDovetail_3780:HG4_Ill_MetaSV_3906:HG3_PB_pbsv_4791;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_4923;NumExactMatchSVs=1;ClusterMaxShiftDist=0.176991;ClusterMaxSizeDiff=0.176991;ClusterMaxEditDist=0.251121;PBcalls=6;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=116;DistBack=0;DistForward=7;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=4:138243866-138243865;PctSeqSimilarity=0.9364;PctSizeSimilarity=1;PctRecOverlap=0.9915;SizeDiff=0;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=97;MatchId=4151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:22:./.:36:0:10:22:./.:0:0:0:0:0/1:29:12:./.:.:.:.:.:.
chr4	138298989	HG2_Ill_MetaSV_3723	C	CAAGAATAATGTTACCAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATGGCGTGAACCCCAGGGGGCGGAGCTTGCAGTGAGCTGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3590:HG3_PB_HySA_7582:HG2_PB_pbsv_4924:HG2_PB_HySA_9260:HG3_PB_pbsv_4792:HG4_PB_HySA_7382:HG4_PB_pbsv_4961:HG2_Ill_breakscan11_3488:HG4_PB_assemblyticsfalcon_19658:HG3_PB_assemblyticsfalcon_20044:HG4_Ill_MetaSV_3907:HG3_PB_SVrefine2PBcRDovetail_2245:HG4_Ill_GATKHCSBGrefine_3520:HG3_Ill_SVrefine2DISCOVARDovetail_3816:HG3_Ill_MetaSV_3899:HG3_Ill_GATKHCSBGrefine_3350:HG2_Ill_SVrefine2DISCOVARplusDovetail_9792:HG2_Ill_MetaSV_3723:HG2_Ill_GATKHCSBGrefine_3377:HG3_PB_SVrefine2Falcon1Dovetail_3049:HG2_PB_SVrefine2Falcon1plusDovetail_9002:HG4_PB_SVrefine2PBcRDovetail_2514:HG2_PB_SVrefine2PBcRplusDovetail_8369:HG2_PB_HySA_9258;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3377:HG2_Ill_MetaSV_3723:HG2_Ill_SVrefine2DISCOVARplusDovetail_9792:HG3_Ill_GATKHCSBGrefine_3350:HG3_Ill_MetaSV_3899:HG3_Ill_SVrefine2DISCOVARDovetail_3816:HG4_Ill_GATKHCSBGrefine_3520:HG4_Ill_MetaSV_3907;NumExactMatchSVs=8;ClusterMaxShiftDist=0.234528;ClusterMaxSizeDiff=0.228013;ClusterMaxEditDist=0.263844;PBcalls=15;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:138298990-138299005;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:43:0|1:26:0:0:32:./.:0:0:0:0:0/1:19:12:./.:3:36:.:.:.
chr4	139225199	HG3_Ill_GATKHCSBGrefine_3353	A	AAGATGTTTAAAAACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGTGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCCT	20	PASS	ClusterIDs=HG4_PB_HySA_7385:HG4_PB_pbsv_4963:HG2_PB_assemblyticsPBcR_19481:HG2_PB_pbsv_4928:HG2_Ill_GATKHCSBGrefine_3380:HG3_PB_pbsv_4796:HG2_PB_SVrefine2Falcon2Bionano_2375:HG4_PB_assemblyticsfalcon_19666:HG3_PB_assemblyticsfalcon_20053:HG2_PB_SVrefine2PB10Xhap12_3593:HG2_PB_PB10Xdip_21473:HG2_PB_SVrefine2PBcRplusDovetail_8370:HG3_PB_HySA_7592:HG4_PB_SVrefine2PBcRDovetail_2516:HG3_PB_SVrefine2Falcon1Dovetail_3052:HG2_PB_SVrefine2Falcon1plusDovetail_9004:HG3_PB_SVrefine2PBcRDovetail_2248:HG3_Ill_MetaSV_3901:HG3_Ill_GATKHCSBGrefine_3353:HG2_Ill_MetaSV_3725:HG2_10X_SVrefine210Xhap12_3613:HG2_PB_HySA_9270;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_MetaSV_3725:HG3_Ill_GATKHCSBGrefine_3353:HG3_Ill_MetaSV_3901:HG3_PB_SVrefine2PBcRDovetail_2248;NumExactMatchSVs=4;ClusterMaxShiftDist=0.155963;ClusterMaxSizeDiff=0.155963;ClusterMaxEditDist=0.273425;PBcalls=17;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=326;DistBack=4310;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=4:139225200-139225217;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=4153.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:89:1/1:0:18:0:34:./.:0:0:0:0:1/1:0:12:1/1:2:83:.:.:.
chr4	140236152	HG4_Ill_GATKHCSBGrefine_3525	C	CAGTTCAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6465:HG2_Ill_SpiralSDKrefine_12763:HG4_Ill_svaba_6473:HG2_PB_pbsv_4932:HG4_Ill_Krunchall_7371:HG4_Ill_GATKHC_8357:HG4_Ill_GATKHCSBGrefine_3525:HG4_Ill_250bpfermikitraw_6973:HG4_Ill_150bpfermikitraw_6673:HG2_Ill_svaba_6357:HG2_Ill_Krunchall_7108:HG2_Ill_GATKHC_8301:HG2_Ill_250bpfermikitraw_6938;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6465:HG4_Ill_svaba_6473:HG4_Ill_Krunchall_7371:HG4_Ill_GATKHC_8357:HG4_Ill_GATKHCSBGrefine_3525:HG4_Ill_250bpfermikitraw_6973:HG4_Ill_150bpfermikitraw_6673:HG2_Ill_svaba_6357:HG2_Ill_Krunchall_7108:HG2_Ill_GATKHC_8301:HG2_Ill_250bpfermikitraw_6938;NumExactMatchSVs=11;ClusterMaxShiftDist=0.162162;ClusterMaxSizeDiff=0.162162;ClusterMaxEditDist=0.216216;PBcalls=1;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=7;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=4;REFWIDENED=4:140236151-140236157;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:23:0|1:27:1:0:18:./.:0:0:0:0:0/1:28:33:./.:.:.:.:.:.
chr4	140493342	HG2_PB_pbsv_4933	C	CATCTTATCTTCTTTCTTCTTCTTCTTCTTCTTTTCTTCTTCTTCTCTTCTTCTCTTCTTCTTCTTTTCTTTCTTCTCTTCTTCTTCTTCTTCTTCTTCCCTATCTTCTTTTTCTTTCTTTCTTCTTCTTCTTCTCTTCTTCTTCTTTTCTTCTTCTTATCTTCTTCTT	10	PASS	ClusterIDs=HG2_PB_pbsv_4933:HG3_PB_SVrefine2PBcRDovetail_2253:HG3_PB_pbsv_4800:HG4_PB_pbsv_4968:HG2_PB_SVrefine2Falcon2Bionano_2380;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_4933;NumExactMatchSVs=1;ClusterMaxShiftDist=0.125786;ClusterMaxSizeDiff=0.125786;ClusterMaxEditDist=0.201258;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=168;DistBack=27897;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=4:140493343-140493374;PctSeqSimilarity=0.94;PctSizeSimilarity=1;PctRecOverlap=0.9645;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=96;MatchId=4155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:23:0|1:30:2:2:19:./.:0:0:0:0:0/1:18:7:./.:.:.:.:.:.
chr4	140775820	HG2_PB_HySA_9280	A	ACCACAGTCCCCAGTCCAGGAGACCTCTGGTCCTAAGGGCAGTCTCACTCCGTGCCCAAGATCACTTACAGGGCTGAGTGCTAGTGCAGGAGGAAGGCCTGCTCTTTGTTGCAGAACACGGTGGTGGGGACTCGCTCTC	20	PASS	ClusterIDs=HG2_PB_HySA_9280:HG3_PB_HySA_7605:HG3_PB_pbsv_4801:HG2_Ill_SVrefine2DISCOVARplusDovetail_9805;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_9280;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0430108;ClusterMaxSizeDiff=0.0215054;ClusterMaxEditDist=0.135714;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=138;DistBack=-1;DistForward=7;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=131;REFWIDENED=4:140775821-140775951;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9928;PctRecOverlap=0.9856;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:./.:23:11:1:13:./.:0:0:0:0:0/1:27:18:./.:.:.:.:.:.
chr4	140938920	HG3_Ill_MetaSV_3904	T	TAAGAAAGGGGGATAGCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3490:HG4_PB_pbsv_4969:HG3_PB_HySA_7607:HG3_PB_pbsv_4802:HG4_PB_HySA_7398:HG2_PB_HySA_9282:HG2_PB_assemblyticsPBcR_19494:HG4_PB_assemblyticsfalcon_19677:HG3_PB_assemblyticsfalcon_20062:HG4_PB_SVrefine2PBcRDovetail_2521:HG2_PB_SVrefine2Falcon1plusDovetail_9009:HG4_Ill_manta_1244:HG4_Ill_SVrefine2DISCOVARDovetail_3787:HG4_Ill_MetaSV_3912:HG4_Ill_GATKHCSBGrefine_3526:HG3_Ill_SVrefine2DISCOVARDovetail_3833:HG3_Ill_MetaSV_3904:HG3_Ill_GATKHCSBGrefine_3357:HG2_PB_SVrefine2PBcRplusDovetail_8375:HG2_PB_SVrefine2PB10Xhap12_3600:HG2_PB_SVrefine2Falcon2Bionano_2381:HG2_Ill_SVrefine2DISCOVARplusDovetail_9806:HG2_Ill_MetaSV_3729:HG2_Ill_GATKHCSBGrefine_3384:HG2_10X_SVrefine210Xhap12_3620:HG3_PB_SVrefine2Falcon1Dovetail_3056:HG2_PB_PB10Xdip_21505;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3620:HG2_Ill_GATKHCSBGrefine_3384:HG2_Ill_MetaSV_3729:HG2_Ill_SVrefine2DISCOVARplusDovetail_9806:HG2_PB_SVrefine2Falcon2Bionano_2381:HG2_PB_SVrefine2PB10Xhap12_3600:HG2_PB_SVrefine2PBcRplusDovetail_8375:HG3_Ill_GATKHCSBGrefine_3357:HG3_Ill_MetaSV_3904:HG3_Ill_SVrefine2DISCOVARDovetail_3833:HG4_Ill_GATKHCSBGrefine_3526:HG4_Ill_MetaSV_3912:HG4_Ill_SVrefine2DISCOVARDovetail_3787:HG4_Ill_manta_1244;NumExactMatchSVs=14;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.25;ClusterMaxEditDist=0.277027;PBcalls=15;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=151;DistBack=2;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:140938921-140938935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:15:77:./.:4:28:6:16:./.:0:0:0:0:1/1:0:27:./.:.:.:.:.:.
chr4	141283431	HG3_PB_SVrefine2Falcon1Dovetail_3058	A	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTTCTTCTTTCTTCTTCTTCTTCTTCTTTTCTTCTTCTCCTTCTCCTTCTCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCCCTTCTCCTTCTCCTTTCCCTTCTCCCTTCTTCTTCTTCTTCTTCTTCTT	10	PASS	ClusterIDs=HG2_PB_pbsv_4938:HG2_PB_HySA_9287:HG2_PB_HySA_9286:HG3_PB_SVrefine2Falcon1Dovetail_3058:HG4_PB_assemblyticsfalcon_19679:HG3_PB_assemblyticsfalcon_20066:HG2_PB_SVrefine2PB10Xhap12_3601:HG2_PB_SVrefine2Falcon2Bionano_2383:HG2_PB_SVrefine2Falcon1plusDovetail_9010:HG4_PB_pbsv_4971:HG2_PB_PB10Xdip_21507;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_3058;NumExactMatchSVs=1;ClusterMaxShiftDist=0.359202;ClusterMaxSizeDiff=0.359202;ClusterMaxEditDist=0.368071;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=253;DistBack=2;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=24;REFWIDENED=4:141283432-141283455;PctSeqSimilarity=0.975;PctSizeSimilarity=0.9731;PctRecOverlap=0.9004;SizeDiff=-7;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=94;MatchId=4158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:20:28:./.:0:0:0:0:./.:0:0:0:0:1/1:1:15:./.:.:.:.:.:.
chr4	142443042	HG2_Ill_SVrefine2DISCOVARplusDovetail_9810	T	TCTTTGAACCTGTCATGGTGCTTAATTTCCTATTTAGTGTTAATCTCTCAGGACAGGGATACCCATTGGGAGAAGATGCTCACAGGTGTCCCATTGGCTTGAGCACAGCCCACTGGCTTCCAGGTTTCAAGCCACCACTCCACAGCA	20	PASS	ClusterIDs=HG3_PB_HySA_7618:HG2_10X_SVrefine210Xhap12_3629:HG4_PB_pbsv_4978:HG3_PB_pbsv_4809:HG4_PB_HySA_7411:HG2_PB_pbsv_4943:HG2_PB_HySA_9294:HG3_PB_SVrefine2Falcon1Dovetail_3061:HG3_Ill_SVrefine2DISCOVARDovetail_3838:HG2_Ill_SVrefine2DISCOVARplusDovetail_9810:HG2_10X_SVrefine210Xhap12_3628;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3628:HG2_Ill_SVrefine2DISCOVARplusDovetail_9810:HG3_Ill_SVrefine2DISCOVARDovetail_3838:HG3_PB_SVrefine2Falcon1Dovetail_3061;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0852459;ClusterMaxSizeDiff=0.0852459;ClusterMaxEditDist=0.254181;PBcalls=7;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=146;DistBack=-145;DistForward=73;DistMin=-145;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=147;REFWIDENED=4:142443043-142443189;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4159.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:29:0|1:23:1:4:27:./.:0:0:0:0:0/1:14:13:./.:.:.:.:.:.
chr4	143206584	HG2_Ill_250bpfermikitraw_6962	C	CTCATGACCTCAGATATACCATGAAGGGAGGTGACATCTCTAGGTGACCTAAGGATTGAGGT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9816:HG4_PB_pbsv_4985:HG3_PB_HySA_7627:HG2_PB_pbsv_4948:HG2_PB_PB10Xdip_21512:HG3_PB_pbsv_4812:HG4_Ill_svaba_6501:HG4_Ill_Krunchall_7401:HG4_Ill_GATKHC_8393:HG4_Ill_GATKHCSBGrefine_3536:HG4_Ill_250bpfermikitraw_7004:HG4_Ill_150bpfermikitraw_6707:HG3_Ill_svaba_6487:HG3_Ill_Krunchall_6996:HG3_Ill_GATKHC_8316:HG3_Ill_GATKHCSBGrefine_3363:HG3_Ill_250bpfermikitraw_6719:HG3_Ill_150bpfermikitraw_6557:HG2_Ill_svaba_6379:HG2_Ill_scalpel_4914:HG2_Ill_Krunchall_7135:HG2_Ill_GATKHC_8328:HG2_Ill_GATKHCSBGrefine_3391:HG2_Ill_250bpfermikitraw_6962:HG2_Ill_150bpfermikitraw_6491:HG4_PB_HySA_7419:HG2_PB_HySA_9306:HG4_PB_SVrefine2PBcRDovetail_2526:HG2_PB_SVrefine2PBcRplusDovetail_8379:HG2_PB_SVrefine2PB10Xhap12_3606:HG2_PB_SVrefine2Falcon2Bionano_2387:HG2_PB_SVrefine2Falcon1plusDovetail_9014;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6491:HG2_Ill_250bpfermikitraw_6962:HG2_Ill_GATKHCSBGrefine_3391:HG2_Ill_GATKHC_8328:HG2_Ill_Krunchall_7135:HG2_Ill_scalpel_4914:HG2_Ill_svaba_6379:HG3_Ill_150bpfermikitraw_6557:HG3_Ill_250bpfermikitraw_6719:HG3_Ill_GATKHCSBGrefine_3363:HG3_Ill_GATKHC_8316:HG3_Ill_Krunchall_6996:HG3_Ill_svaba_6487:HG4_Ill_150bpfermikitraw_6707:HG4_Ill_250bpfermikitraw_7004:HG4_Ill_GATKHCSBGrefine_3536:HG4_Ill_GATKHC_8393:HG4_Ill_Krunchall_7401:HG4_Ill_svaba_6501;NumExactMatchSVs=19;ClusterMaxShiftDist=0.140625;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.272727;PBcalls=12;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=-75;DistForward=21;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=93;REFWIDENED=4:143206575-143206667;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:0:21:0:18:./.:0:0:0:0:./.:2:38:./.:.:.:.:.:.
chr4	143258300	HG2_Ill_GATKHCSBGrefine_3392	A	AAAGTACATTTATTTTCTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAATGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_pbsv_4813:HG4_PB_assemblyticsfalcon_19696:HG2_PB_pbsv_4949:HG3_PB_assemblyticsfalcon_20087:HG2_Ill_breakscan11_3491:HG4_PB_SVrefine2Falcon1Dovetail_3020:HG2_Ill_MetaSV_3731:HG2_Ill_GATKHCSBGrefine_3392:HG2_10X_SVrefine210Xhap12_3634:HG3_Ill_MetaSV_3908:HG2_PB_SVrefine2Falcon2Bionano_2388:HG3_PB_SVrefine2Falcon1Dovetail_3064:HG2_PB_SVrefine2Falcon1plusDovetail_9015:HG3_PB_HySA_7628;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3634:HG2_Ill_GATKHCSBGrefine_3392:HG2_Ill_MetaSV_3731;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0705128;ClusterMaxEditDist=0.211509;PBcalls=9;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=313;DistBack=42317;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:143258301-143258316;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:38:0|1:37:0:3:27:./.:0:0:0:0:0/1:28:9:0/1:6:22:.:.:.
chr4	145395291	HG2_PB_SVrefine2PB10Xhap12_3609	T	TAAAAACACATTACCATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCGAGGCGGCGGATCACGAGGTCAGAGATCGAGACCATCCGGCTAAAACGGTGAAACCCGTCTCTACTAAAAATACAAAAAATTAGCCGGCTAGTGGCGGCGCCTGTATCCAGCTACTCGGAGGCTGAGGCAGGAGAATGCGTGAACCGGAGGCGGAGTTGCAGTGAGCCGAGATCCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_pbsv_4819:HG2_PB_assemblyticsfalcon_20168:HG3_PB_assemblyticsfalcon_20095:HG2_PB_pbsv_4956:HG2_PB_HySA_9332:HG2_PB_SVrefine2Falcon2Bionano_2391:HG2_PB_SVrefine2Falcon1plusDovetail_9018:HG2_PB_SVrefine2PB10Xhap12_3609:HG3_PB_SVrefine2Falcon1Dovetail_3069;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3609;NumExactMatchSVs=1;ClusterMaxShiftDist=0.104634;ClusterMaxSizeDiff=0.0986547;ClusterMaxEditDist=0.211288;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=317;DistBack=15328;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=4:145395292-145395308;PctSeqSimilarity=0.9709;PctSizeSimilarity=0.9491;PctRecOverlap=0.9463;SizeDiff=-17;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:32:0|1:18:3:4:23:./.:0:0:0:0:0/1:25:7:0/1:9:17:.:.:.
chr4	146714480	HG4_Ill_manta_1248	C	CTTATATATATTATATATATTAAATATATATCTTATATATTTAATATATATAATATATATA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3646:HG4_Ill_svaba_6515:HG4_PB_pbsv_4996:HG3_PB_pbsv_4824:HG2_PB_pbsv_4961:HG2_Ill_breakscan11_3492:HG2_PB_HySA_9339:HG4_Ill_scalpel_4829:HG4_Ill_manta_1248:HG4_Ill_Krunchall_7418:HG4_Ill_GATKHC_8406:HG4_Ill_GATKHCSBGrefine_3540:HG4_Ill_FB_4649:HG4_Ill_250bpfermikitraw_7019:HG4_Ill_150bpfermikitraw_6723:HG3_Ill_svaba_6504:HG3_Ill_scalpel_5009:HG3_Ill_Spiral_5484:HG3_Ill_GATKHC_8334:HG3_Ill_GATKHCSBGrefine_3368:HG3_Ill_250bpfermikitraw_6737:HG2_PB_assemblyticsfalcon_20172:HG2_Ill_svaba_6395:HG2_Ill_scalpel_4923:HG2_Ill_manta_1406:HG2_Ill_Krunchall_7152:HG2_Ill_GATKHC_8345:HG2_Ill_GATKHCSBGrefine_3396:HG2_Ill_FB_4587:HG2_Ill_250bpfermikitraw_6979:HG2_Ill_150bpfermikitraw_6505:HG2_PB_PB10Xdip_21525:HG4_Ill_svaba_6514:HG3_PB_HySA_7655:HG3_Ill_svaba_6503:HG3_Ill_Krunchall_7016:HG3_Ill_GATKHC_8333:HG3_Ill_GATKHCSBGrefine_3367:HG3_Ill_250bpfermikitraw_6736:HG2_Ill_svaba_6394:HG4_Ill_SVrefine2DISCOVARDovetail_3807:HG3_Ill_SVrefine2DISCOVARDovetail_3850:HG2_Ill_SVrefine2DISCOVARplusDovetail_9826;NumClusterSVs=43;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6505:HG2_Ill_250bpfermikitraw_6979:HG2_Ill_FB_4587:HG2_Ill_GATKHCSBGrefine_3396:HG2_Ill_GATKHC_8345:HG2_Ill_Krunchall_7152:HG2_Ill_manta_1406:HG2_Ill_scalpel_4923:HG2_Ill_svaba_6395:HG2_PB_assemblyticsfalcon_20172:HG3_Ill_250bpfermikitraw_6737:HG3_Ill_GATKHCSBGrefine_3368:HG3_Ill_GATKHC_8334:HG3_Ill_Spiral_5484:HG3_Ill_scalpel_5009:HG3_Ill_svaba_6504:HG4_Ill_150bpfermikitraw_6723:HG4_Ill_250bpfermikitraw_7019:HG4_Ill_FB_4649:HG4_Ill_GATKHCSBGrefine_3540:HG4_Ill_GATKHC_8406:HG4_Ill_Krunchall_7418:HG4_Ill_manta_1248:HG4_Ill_scalpel_4829:HG4_Ill_svaba_6515;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0813008;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.241935;PBcalls=7;Illcalls=35;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=60;DistBack=16;DistForward=10575;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=89;REFWIDENED=4:146714402-146714490;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:0:22:2:14:./.:0:0:0:0:./.:4:46:./.:.:.:.:.:.
chr4	147208027	HG2_PB_SVrefine2PBcRplusDovetail_8388	G	GGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACCGAGTTTGGAGTGGTGAGAAGGACCGTGTTTGGAGTGGTGAGAAGGACCGTGTTTGGAGTGGTGAGAAGGATCATGTTTGGAGTGGTGAGAAGGACCGTGTTTGGAGTGGTGAGAAGGACTGTGTCTGGAGTGGTGAGGAGGACTGTGTCTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGGGCTTGTGTTTGGAGTGGTGAGAAGGACTGTTTGGAGTGATGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAATGGTGAGAAGGACTGCGTTTGGAGTGGTGAGAAGGACTGAACTTGGAGAGTTGAGAAAGACTGAACTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTCTGGAGTGGTGAGAAGGACTGTGTCTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAGCTTGTGTTTGGAGTGGTGAGAAGGACCGTGTTTGCAGTGGTGAGAAGGACTGTTTGGAGTGATGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTCTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGATTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGATGGAGTTTGGAGTGGTGAGAAGGACCGTGTTTGGAGTGGTGAGAAGGACCGTGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGAGTTGGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTAGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGGGCTTGTGTTTGGAGTGGTGAGAAGGACCATATTTGCAGTGGTGAGAAGGACTGTTTGAAGTGATGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGATTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGATGGAGTTTGGAGTGGTGAGAAGGACCATGTTTGGAGTGGTGAGAAGGACTGAGTTTTGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGCGTTTGGAGTGGTGAGAAGGACTCTGGAGTGGTGAGAGGGACTGAGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGGGCTTGTGTTTGGAGTGGTGAGAAGGACCATATTTGCAGTGGTGAGAAGGACTGTTTGAAGTGATGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGCGTTTGGAGTGGTGAGAAGGACTGAACTGGGAGAATTGAGAAAGACTGAACTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTAGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTCGAGTGGTGAGAAGGACCGAGTCTGGAGTGGTGAGAAGGACCGTGTCTGGAGTGGTGAGAAGGACCGTGTCTGGAGTGGTGAGAAGGACCGTGTCTGGAGTGGTGAGAAGGACTGTGTCTGGAGTGGTGAGGAGGACTGTGTCTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGGGCTTGTGTTTGCAGTGGTGAGAAGGACTGTTTGGAGTGATGAGAAGGACTGTGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAATGGTGAGAAGGACTGCGTTTGGAGTGGTGAGAAGGACTGAACTTGGAGAGTTGAGAAAGACTGAACTTGGAGTGGTGAGAAGGACTGAGTTTGGAGTGGTGAGAAGGACTGTGTTTGGAGTGGTGAGAACGACTGTGTTTGGAATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3614:HG2_PB_pbsv_4962:HG2_PB_SVrefine2PBcRplusDovetail_8388:HG4_PB_pbsv_4998:HG4_PB_SVrefine2Falcon1Dovetail_3024;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_8388;NumExactMatchSVs=1;ClusterMaxShiftDist=0.153024;ClusterMaxSizeDiff=0.152261;ClusterMaxEditDist=0.304578;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=2420;DistBack=78;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1500;REFWIDENED=4:147206903-147208402;PctSeqSimilarity=0.9657;PctSizeSimilarity=0.9376;PctRecOverlap=0.7984;SizeDiff=151;StartDistance=412;EndDistance=412;GTMatch=0;TruScore=90;MatchId=4164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:29:87:0|1:25:1:2:40:./.:0:0:0:0:0/1:7:4:0/1:55:74:.:2244:.
chr4	148053938	HG4_Ill_SVrefine2DISCOVARDovetail_3812	T	TAAGAGTAAAGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_21572:HG2_PB_pbsv_4966:HG2_PB_HySA_9344:HG2_PB_assemblyticsPBcR_19533:HG4_PB_assemblyticsfalcon_19718:HG2_PB_assemblyticsfalcon_20177:HG3_PB_assemblyticsfalcon_20108:HG2_PB_HySA_9343:HG4_PB_HySA_7450:HG4_PB_pbsv_5004:HG2_Ill_breakscan11_3493:HG3_PB_pbsv_4828:HG3_PB_HySA_7665:HG3_PB_SVrefine2PBcRDovetail_2266:HG3_Ill_GATKHCSBGrefine_3370:HG4_PB_SVrefine2PBcRDovetail_2531:HG2_PB_SVrefine2PBcRplusDovetail_8390:HG2_PB_SVrefine2PB10Xhap12_3616:HG2_PB_SVrefine2Falcon2Bionano_2396:HG4_PB_SVrefine2Falcon1Dovetail_3029:HG4_Ill_SVrefine2DISCOVARDovetail_3812:HG4_Ill_MetaSV_3920:HG4_Ill_GATKHCSBGrefine_3545:HG3_Ill_SVrefine2DISCOVARDovetail_3856:HG2_PB_SVrefine2Falcon1plusDovetail_9023:HG2_Ill_SVrefine2DISCOVARplusDovetail_9832:HG2_Ill_GATKHCSBGrefine_3397:HG3_PB_SVrefine2Falcon1Dovetail_3073:HG2_10X_SVrefine210Xhap12_3651:HG3_Ill_MetaSV_3914:HG2_Ill_MetaSV_3737;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3397:HG2_Ill_SVrefine2DISCOVARplusDovetail_9832:HG2_PB_SVrefine2Falcon1plusDovetail_9023:HG3_Ill_SVrefine2DISCOVARDovetail_3856:HG4_Ill_GATKHCSBGrefine_3545:HG4_Ill_MetaSV_3920:HG4_Ill_SVrefine2DISCOVARDovetail_3812:HG4_PB_SVrefine2Falcon1Dovetail_3029;NumExactMatchSVs=8;ClusterMaxShiftDist=0.110599;ClusterMaxSizeDiff=0.110599;ClusterMaxEditDist=0.205663;PBcalls=20;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=324;DistBack=28202;DistForward=26981;DistMin=26981;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=4:148053939-148053950;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:97:./.:0:1:0:1:./.:0:0:0:0:1/1:0:29:1/1:2:70:.:.:.
chr4	151172000	HG2_PB_SVrefine2Falcon1plusDovetail_9031	A	ACCCACATCCCCACACCCCCAACATCCCCCACACTCCCCACACCCCCACACCCCCACATCCCCACACACCACAAATCCTCCACACCCCCACACCACACATCCCCCACACCCCCCACACCCCACACACCCCCACACCACACATCCCCCACACCCCCCACACCCCACACACCCCCACACCACACATCCCCCACACCCCCCACACCCCCACACACCCCCCACACCACACATCCCTCACACCACACATCCCCCACACCCCCACACCCCCACACACCCCCCACACCACACATCCCTCACACCCCCCAACACCCCACACACCCCCCACACCACACATCCCTCACACCACACATCCCTCACACCCCCCAACACCCCCACACCCTCACACACCCCACACCACACCCCCACACCACACATCCCCACACCCCCAACACCCCCACACCCCCACACACCCCCCACACCACACACCCCACACCCCCCACACCCCACACACCCCCCACACCACACATCCCCCACACCCCCAAATCCCCACACCCCCCACATCCCCACACCCCCATCCCCCACACTCCCCACACCCCCCACACCCCCACACCACACATCCCCCACACCCCACACCCCCACCACCCCACACCACACATCCCCACACCCCCCACACCCCCCACACCCCCCACACCACACATCCCCCACATCCCCACACCCCCCACACCCCCACACACATCCCCCACTCCCCACACCCCCCACACCCCCCACACCACACATCCCCCACACCCCCCACACCCCCACACACCCCCACACCACACATCCCCCACACCCCCACACCCCCACACACCCCCACACCACACATCCCCCACACCCCAAATCCCCCACACCCCCCACATCCCCCATACCCCTCACATCCCCCACATCCCCCACACCCCCCACATCCCCCATACCCCTCACATCCCCCACACCCCCCAAATCCCCCACACCTCCCCACATCCCCCATACCCCTCACATCCCCCACACCTCCCCCATCCCCCACACCCCCCACACCCCCCACATCCCCCCACACCACAAATCCTCCACACCCCCCAACACCCCCACACCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9031:HG3_PB_SVrefine2Falcon1Dovetail_3083:HG2_PB_SVrefine2PB10Xhap12_3625:HG2_PB_SVrefine2PBcRplusDovetail_8399:HG4_PB_SVrefine2Falcon1Dovetail_3036;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9031;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0507246;ClusterMaxSizeDiff=0.0507246;ClusterMaxEditDist=0.107834;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1080;DistBack=-794;DistForward=1;DistMin=-794;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=302;REFWIDENED=4:151172001-151172302;PctSeqSimilarity=0.9614;PctSizeSimilarity=0.9566;PctRecOverlap=0.7768;SizeDiff=-49;StartDistance=-228;EndDistance=-228;GTMatch=1;TruScore=89;MatchId=4167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:87:1/1:1:15:1:13:./.:0:0:0:0:./.:7:0:0/1:3:12:.:2874:.
chr4	151293915	HG2_PB_pbsv_4982	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTATCCCGCTGTTTTAGCCCAGGCCGGTATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCGCCTCCCAGCGTTCACGCACCATTTCTCCTGCTCAGGCCTCCGCAGTAGCTGGACTAAGCGCCCGCCACCGGCGCCCTGGCTAATTTTTGTATTTTTAGTAGAGCGGGCGGTTTTCACCGTGTTAGCCCCAAGATCGTCTCCGATGACTCCTGACCTTGTGATCCGCCCGCCTCTGACCTCCCAAATGCATGGGGATTACAGGCGTGAGCCACCGCGCCCAGCCAGTAAGTTCTT	20	PASS	ClusterIDs=HG2_PB_HySA_9393:HG2_PB_pbsv_4982:HG2_PB_assemblyticsfalcon_20212:HG3_PB_pbsv_4845:HG3_PB_SVrefine2Falcon1Dovetail_3084:HG4_PB_pbsv_5016:HG4_PB_SVrefine2PBcRDovetail_2540:HG2_PB_assemblyticsPBcR_19558:HG4_PB_assemblyticsfalcon_19746:HG2_PB_SVrefine2PBcRplusDovetail_8400:HG2_PB_SVrefine2Falcon1plusDovetail_9032:HG4_PB_SVrefine2Falcon1Dovetail_3037:HG4_PB_HySA_7489:HG2_Ill_breakscan11_3496;NumClusterSVs=14;ExactMatchIDs=HG2_PB_pbsv_4982;NumExactMatchSVs=1;ClusterMaxShiftDist=0.204651;ClusterMaxSizeDiff=0.204651;ClusterMaxEditDist=0.275862;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=342;DistBack=5;DistForward=8990;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=4:151293916-151293915;PctSeqSimilarity=0.9378;PctSizeSimilarity=0.9854;PctRecOverlap=0.9534;SizeDiff=5;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=95;MatchId=4168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:40:./.:0:21:13:5:./.:0:0:0:0:0/1:23:5:0/1:6:14:.:.:.
chr4	151875120	HG4_Ill_150bpfermikitraw_6769	C	CCCGCCACCCCGTCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGCGACTCCGTCTGGGAACTGAGGAGTGTCTCTGCCCCG	20	PASS	ClusterIDs=HG2_PB_HySA_9400:HG4_PB_pbsv_5020:HG3_PB_HySA_7709:HG3_PB_pbsv_4848:HG2_PB_pbsv_4986:HG2_PB_assemblyticsfalcon_20222:HG2_PB_PB10Xdip_21593:HG4_Ill_GATKHCSBGrefine_3557:HG4_Ill_150bpfermikitraw_6769:HG3_Ill_Spiral_5528:HG3_Ill_GATKHC_8395:HG3_Ill_GATKHCSBGrefine_3384:HG3_Ill_150bpfermikitraw_6620:HG2_PB_assemblyticsPBcR_19566:HG2_Ill_manta_1418:HG2_Ill_GATKHC_8401:HG2_Ill_GATKHCSBGrefine_3407:HG2_Ill_150bpfermikitraw_6552;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6552:HG2_Ill_GATKHCSBGrefine_3407:HG2_Ill_GATKHC_8401:HG2_Ill_manta_1418:HG2_PB_assemblyticsPBcR_19566:HG3_Ill_150bpfermikitraw_6620:HG3_Ill_GATKHCSBGrefine_3384:HG3_Ill_GATKHC_8395:HG3_Ill_Spiral_5528:HG4_Ill_150bpfermikitraw_6769:HG4_Ill_GATKHCSBGrefine_3557;NumExactMatchSVs=11;ClusterMaxShiftDist=0.106509;ClusterMaxSizeDiff=0.106509;ClusterMaxEditDist=0.208092;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=80;DistBack=6;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=18;REFWIDENED=4:151875119-151875139;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:15:1:23:./.:0:0:0:0:1/1:0:13:./.:.:.:.:.:.
chr4	152135947	HG2_PB_SVrefine2PBcRplusDovetail_8404	C	CCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCAGCTGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCAGACGGGGCGG	20	PASS	ClusterIDs=HG2_PB_pbsv_4987:HG2_PB_assemblyticsPBcR_19569:HG4_PB_SVrefine2Falcon1Dovetail_3039:HG2_PB_assemblyticsfalcon_20225:HG3_PB_assemblyticsfalcon_20155:HG4_PB_assemblyticsfalcon_19758:HG2_PB_SVrefine2Falcon1plusDovetail_9036:HG2_PB_PB10Xdip_21594:HG4_PB_pbsv_5021:HG4_Ill_GATKHCSBGrefine_3558:HG3_PB_SVrefine2PBcRDovetail_2276:HG3_Ill_GATKHCSBGrefine_3385:HG2_PB_SVrefine2PBcRplusDovetail_8404:HG2_PB_SVrefine2PB10Xhap12_3632:HG2_PB_SVrefine2Falcon2Bionano_2409:HG2_Ill_GATKHCSBGrefine_3408:HG3_PB_SVrefine2Falcon1Dovetail_3087:HG3_PB_HySA_7713:HG3_PB_pbsv_4849;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3408:HG2_PB_SVrefine2Falcon2Bionano_2409:HG2_PB_SVrefine2PB10Xhap12_3632:HG2_PB_SVrefine2PBcRplusDovetail_8404:HG3_Ill_GATKHCSBGrefine_3385:HG3_PB_SVrefine2PBcRDovetail_2276:HG4_Ill_GATKHCSBGrefine_3558;NumExactMatchSVs=7;ClusterMaxShiftDist=0.123077;ClusterMaxSizeDiff=0.123077;ClusterMaxEditDist=0.353846;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=127;DistBack=37;DistForward=7871;DistMin=37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=494;REFWIDENED=4:152135558-152136051;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:49:1/1:2:10:3:27:./.:0:0:0:0:1/1:0:15:./.:.:.:.:.:.
chr4	152283565	HG2_Ill_svaba_6439	C	CGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGATGTGAACCCTGGAGGCGGAGCTGGCAGT	20	PASS	ClusterIDs=HG2_PB_HySA_9403:HG4_PB_pbsv_5022:HG2_PB_pbsv_4988:HG4_PB_HySA_7495:HG2_Ill_breakscan11_3497:HG2_PB_PB10Xdip_21595:HG4_Ill_svaba_6558:HG4_Ill_Krunchall_7464:HG4_Ill_GATKHC_8463:HG4_Ill_GATKHCSBGrefine_3559:HG4_Ill_250bpfermikitraw_7067:HG4_Ill_150bpfermikitraw_6773:HG2_PB_assemblyticsfalcon_20226:HG2_PB_assemblyticsPBcR_19570:HG2_Ill_svaba_6439:HG2_Ill_manta_1419:HG2_Ill_SpiralSDKrefine_12825:HG2_Ill_Krunchall_7200:HG2_Ill_GATKHC_8406:HG2_Ill_GATKHCSBGrefine_3409:HG2_Ill_250bpfermikitraw_7029:HG2_Ill_150bpfermikitraw_6557;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6557:HG2_Ill_250bpfermikitraw_7029:HG2_Ill_GATKHCSBGrefine_3409:HG2_Ill_GATKHC_8406:HG2_Ill_Krunchall_7200:HG2_Ill_SpiralSDKrefine_12825:HG2_Ill_manta_1419:HG2_Ill_svaba_6439:HG2_PB_assemblyticsPBcR_19570:HG2_PB_assemblyticsfalcon_20226:HG4_Ill_150bpfermikitraw_6773:HG4_Ill_250bpfermikitraw_7067:HG4_Ill_GATKHCSBGrefine_3559:HG4_Ill_GATKHC_8463:HG4_Ill_Krunchall_7464:HG4_Ill_svaba_6558;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0848485;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.181818;PBcalls=7;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=83;DistBack=24130;DistForward=27620;DistMin=24130;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=4:152283564-152283567;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:0|1:22:2:2:26:./.:0:0:0:0:0/1:22:33:./.:.:.:.:.:.
chr4	152599772	HG2_PB_assemblyticsfalcon_20230	AAACAGAGCTTT	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTCTTTAGCCCAGGCCGGATTGCAGTGGCACAATCTTGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	10	PASS	ClusterIDs=HG2_PB_HySA_9409:HG2_PB_HySA_9410:HG3_PB_pbsv_4852:HG2_PB_assemblyticsfalcon_20230:HG2_PB_pbsv_4993:HG2_PB_SVrefine2Falcon1plusDovetail_9038;NumClusterSVs=6;ExactMatchIDs=HG2_PB_assemblyticsfalcon_20230;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0914127;ClusterMaxSizeDiff=0.0914127;ClusterMaxEditDist=0.206989;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=338;DistBack=-6;DistForward=1;DistMin=-6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:152599784-152599771;PctSeqSimilarity=0.9818;PctSizeSimilarity=0.9337;PctRecOverlap=0.9642;SizeDiff=-24;StartDistance=0;EndDistance=11;GTMatch=0;TruScore=95;MatchId=4174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:34:0|1:28:0:2:24:./.:0:0:0:0:./.:49:5:0/1:16:49:.:.:.
chr4	154095267	HG2_Ill_SVrefine2DISCOVARplusDovetail_9861	G	GATGACAGCCCTTGGATGCTAGACCTCAGACCTTTGCTGCTGGGTGGTGACCCAGCAGCAAAGGTCTGAGGTCTAGCATCCAAGGGCTGTCATCTTA	20	PASS	ClusterIDs=HG4_PB_pbsv_5030:HG4_Ill_svaba_6572:HG2_PB_pbsv_4998:HG4_Ill_Krunchall_7485:HG4_Ill_GATKHCSBGrefine_3563:HG4_Ill_250bpfermikitraw_7083:HG2_PB_SVrefine2Falcon2Bionano_2415:HG2_Ill_svaba_6452:HG2_Ill_manta_1423:HG2_Ill_SpiralSDKrefine_12841:HG2_Ill_SVrefine2DISCOVARplusDovetail_9861:HG2_Ill_GATKHC_8426:HG2_Ill_GATKHCSBGrefine_3413:HG2_Ill_250bpfermikitraw_7045:HG4_PB_HySA_7504:HG2_PB_HySA_9421:HG2_Ill_breakscan11_3498;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7045:HG2_Ill_GATKHCSBGrefine_3413:HG2_Ill_GATKHC_8426:HG2_Ill_SVrefine2DISCOVARplusDovetail_9861:HG2_Ill_SpiralSDKrefine_12841:HG2_Ill_manta_1423:HG2_Ill_svaba_6452:HG2_PB_SVrefine2Falcon2Bionano_2415:HG4_Ill_250bpfermikitraw_7083:HG4_Ill_GATKHCSBGrefine_3563:HG4_Ill_Krunchall_7485:HG4_Ill_svaba_6572;NumExactMatchSVs=12;ClusterMaxShiftDist=0.102041;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.26;PBcalls=5;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=96;DistBack=-3593;DistForward=47544;DistMin=-3593;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=4:154095268-154095275;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:36:0|1:45:1:1:34:./.:0:0:0:0:0/1:38:16:./.:.:.:.:.:.
chr4	154302843	HG3_PB_SVrefine2Falcon1Dovetail_3089	TATTTTTTTTTTTTTTT	ATATAATATATATATATTATATATAATATAATATATATATATAATATATATAATATATATATTTATATTATATATATTATATATATATATTTATTATATATATTATATATATATTATATATATATATAATATATATATATATATATATATA	20	PASS	ClusterIDs=HG3_PB_pbsv_4859:HG4_PB_HySA_7507:HG3_PB_assemblyticsfalcon_20162:HG4_PB_SVrefine2PBcRDovetail_2545:HG3_Ill_SVrefine2DISCOVARDovetail_3883:HG2_Ill_SVrefine2DISCOVARplusDovetail_9862:HG4_Ill_SVrefine2DISCOVARDovetail_3837:HG4_PB_assemblyticsfalcon_19766:HG4_PB_SVrefine2Falcon1Dovetail_3043:HG3_PB_SVrefine2Falcon1Dovetail_3089:HG2_PB_pbsv_5000:HG3_Ill_MetaSV_3922:HG2_Ill_MetaSV_3748:HG4_Ill_MetaSV_3926;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_3089:HG3_PB_assemblyticsfalcon_20162;NumExactMatchSVs=2;ClusterMaxShiftDist=0.351438;ClusterMaxSizeDiff=0.351438;ClusterMaxEditDist=0.351438;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=134;DistBack=0;DistForward=-16;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=47;REFWIDENED=4:154302796-154302842;PctSeqSimilarity=0.9541;PctSizeSimilarity=0.964;PctRecOverlap=0.8411;SizeDiff=-5;StartDistance=10;EndDistance=26;GTMatch=0;TruScore=91;MatchId=4177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:20:0|1:33:1:0:19:./.:0:0:0:0:0/1:13:11:./.:.:.:.:.:.
chr4	154584239	HG3_Ill_GATKHC_8422	T	TGGAGTTGGTGGTGGTGATGGTGGAGTTGATGGTGATGATGGAGGTGGTGGTGATGGTG	20	PASS	ClusterIDs=HG2_PB_pbsv_5001:HG4_Ill_GATKHC_8488:HG3_Ill_GATKHC_8422;NumClusterSVs=3;ExactMatchIDs=HG3_Ill_GATKHC_8422:HG4_Ill_GATKHC_8488;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.180328;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=-1;DistForward=33268;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=4:154584238-154584241;PctSeqSimilarity=0.9574;PctSizeSimilarity=0.931;PctRecOverlap=0.339;SizeDiff=4;StartDistance=37;EndDistance=37;GTMatch=0;TruScore=74;MatchId=4178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:63:1/1:6:36:3:16:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr4	155078195	HG3_Ill_SVrefine2DISCOVARDovetail_3888	A	AACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAACACCTGTTGTTTACTGACTTTTTAATGATCGCCATTCTAACTGGTGATACTGCCTTCTATGAGTAAAAATTTCTGTACATTGTTATCATTGTCTCTAATAGGGCATGATTTTAGATTATTCACTAGGGTTACATAACGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAGATATATATGCACCCAATACATATAGTTCTGTAGATGTCTATTAGGTCAGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGCATCCTTGTTAACTTTCTGTCTCATTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTATTGTGTGGGAGTCTAAATCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATACATATTTAGGATAGTTAGCTCTTCTTGTTGAATGGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCGACCCCTGCCTTTTTTTGGTTTCCATTTGCTTGGTAGATCTTCCTCCATCCCTTTACTTTGTGCCTATATGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTAACTCTTTATCCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTAGCCCATTTACATTTAAGGTTAGTATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTATTTTGCTCGTTAATTGATGCAGTTTCTTCCTAGCATCGATGGTGTTTACAATTTGGCACGTTTTTGCAGTGGCTGGTACTGGTTGTTCCTTTCCATGTTTAGTGTTTCCTTCAGGAGCTCTTATAAGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGCTGAAATTTCCTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGAGTTTCTGCCGAGAGATCCACTGTTAGTCTGATGGGCTTCCCTTTGTGGGTAACCTGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAAATAAGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGTATGTGAATGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCCCATCACTTTCAGGTACACCAATCAGACATAGATTTGGTCTTTTCACATAGTCCCATTTTCCGGAGGCTTTGTTCATTTCTTTTTACTCTTTTTTCTCTAAACTTCTCACTTCATTTTATTCATTTGATCTTCCATCACTGATACCCTTTCTTCCAGTTGATCGAATCGGCTACTGAAGCTTGTGCATGCGTCACATAGTTCTTGTGCCATGGTTTTCAGCTCCACAAGGTCATTAAAGGTCTTCTCTATGCTGTTTCTTCTAGTTAGCCATTCGTCCAATCTTTTTTCAAGGTTTTTAGCTTCTTTGCAATGGGTTCGAACATCCTCCTTTAGCTTGGAGAAGTTTGTTATTACTAATCTTCTGAAGCCTTCTTCTCTGAACTTGTCAAAGTCATTCTCTGTCCAGCTTTGTTCCGTTGCTGGCAAGGAGTTGCTTTCCTTTGGAGGCGAAGAGGCGCTCTGATTTTTAGAATTTTCAGCTTTTCTGCTCTGGTTTCTCCCCATCTTTGTGGTTTTTATCTACCTTTGATCTTTGATGATGGTGACGTACAGATGTGGTTTTGGTGTGGATGTCCTTTCTGTTTGTTAGTTTTCCTCCTAACAGTCAGGACCCTCAGCTGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACGCCAGACCCTGTTTGCCTGGGTATCGTCAGCAGAGGCTGCAGAACCGCAAATATTGCAGAACGATAAATGTTGCTGCCTGATCGTTCCTCTGGAAGCTTATTCTCAGTGGGGCACCCGGCCGTATGAGGTGTCAGTTGGCCCCTACTGGGAGGTGCCTCCCAGTTAGGCTACTTAGGGGTCAGGGACCCACTAGAGGAGGCAGTCTGTCCGTTCTCAGATCTCAAATTCTGTGCTGGGAGAAGCGCTACTCTCTTCAAAGCTGTCAGACAGGGACGCTTAAGTCTGCAGAAGTTTCTGCTGCCTTTTGTTCAGCTACGCCCTGCCCCCAGAGGTGGCGTCTACAGAGGCAGGCAGGTCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCCGCTTTGTTTACCTACTCAAGCCTCAGCAATGGTGGGCACCCCTCCCCCAGCCTCACTGCGGCATTGCAGTTCGATCTCAGACTGCTGTGCTAGCAGTGAGCAAGGCTCCGTGGGTGTGGGACCCTCTGAGCCAGGCACAGGATATAATCTGGTGTGCCGTTTGCTAAGACTGTTGGAAAAGTGCAGTATTAGGGTGGGAGTAACCCGATTTTCCCGGTGCCATCTGTCATGGCCTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCGCTTCCCGGGTGAGGTGATGCCTCACCCTGCTTCAGCTCACAGTCTTTGGGCTGTACCCACTGTCCTGCCCCCACTGTCCGACAAGCCCCAGTGAGATGAACCCAGTACCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTGTGTTGCTCATGCTGGGAGCTGTAGACTGGAGCTGTTCCTATTCAGCCATCTTAGAACCTCCCCACTATGGAGTTTTGAGTCATTTATATGTTCTAGATACCAGTCCTATATCAGATATGTGTTTTGCAAATATTTTCTGCAAGTTTATGTTTTATGTTTTTAACATTATTCTTTGAAGAAGAAAAGTTTTTAATTTTAATGAAGTCCAATTAACCAATTTTAAAAATAATTTGTGCTTTTTGTGTCCTGTGTAAGAATCTCTGTCTGACTTAAAATGGCAAAGATTATCTCCTGAATTTTCTGGTAGTAATTTTATACTTGTATATTTTAAATTTATAGGTATGATCCATTTTGATTTAATATTTGCATATGGTACAGGGTAGATAGAGGTCAAGCTTTATTTACTTGTATATAGATATCAAATTGTTCCATCACCATATATGGAAAATAATATCATTTCTGCATTAAATTTACTTAGTACCTATGGCAAAAAGCAATTAAGTATATATGTGAGAATCTATTTCTAAAATCTTTATTCTGTTCCACTGATATACGTGCCTATCCTTTTGTCAATATCATATTACCTTAATTATTATAGATTTGTAGTAAGTTTGAAACCAGATAGTGTTAGTCTTCCAACTTAATTATTTTTTTCAAAATCATTTTGACCAGTCCCTGCTTTTCTGGTTATTCATTTCTTTATCTTAATAATTTGATACTCAGCTTGTCAATTTCTACAAAAATAGCCTACCAGAATCTTGCCTGGTGTGCTGTGAATCTATATATTGATTCAAAGGAGAATTAACTTACTAAGAAATTGAGTCTTCCTTGTGTTGATTTATTTTGATCTTCTTTGATTTCTCTCATCAATGTGTTTTAGTTTTCGATACAAACACTCCACATATTTTGTTATATATAATAATTTTATATTTTGTGTATTATGGTAAATCATACTGTTTTCCTGACTTCAATTTTCAATTCTGTATGTTAGCTATATAGAGAAGTACAATTAATTTTTGAATATTAACATTCCTAAATTCATGTATTAGTTCTAGTTGCTTTTTAATAAATTCTTAGGGTTTTTCTATGTAGACAATCATACAATCTATGAAAAAAGGCAGTTTTAATTCTTTCTTTTAAATCTATATGTCCTTTTTTTCTCTTGTCTTATGAGACTGGCTAGGTCTTCCAGGTAATACTGAATAGGAGCCATAAAAGAATATATTCTTGCTTTGCTACTGATATTAAGGTGGAAAGCTTTCAGGATTTCACTCTGAATTAAGGTATTAACTGTAAATTTTTCAAAGATGCCTTTTATCAAGAATTAAATTCCTTTTAATTTCTCATTTGCTTAGAGGCTTTTTAAAAATCATGAATGGATTTTGAATTTTGTCAATTTTTTTTTGGCATCTATTGAGATGGTTTTTTTTATCCTTTAGCCTATTGATATGATGAATTATATTGATTTTCAAATATTAAATCAACTTTATGTTTTTGTGGTAAACCCTCTCTTAGTCATAATGTCTTATCTTCTTTATAAATTGCTGAATTTGACTTATTAATAATTGGTGAAGATTTTTAGGAGTGTTTTTATGAAGAGTAGGTTTTTCTCTTACAATATCTTTGTCAGTGTTCCATTTTGGTTGCTTTCTATTGAACTGTCTCTAAGTTCACTGGCTCATCCCTCAGATCAAGTTTAGTCATAACCACATTGATGACATTCTTCATCTCTTATATATTCATCTCTATGCCACATTTGTTATATATAGCATTTCTAGTTAAGTCCTTCTTTTAGTTTTTATCACTTTGCTGAAGTTTCCCATCTATTTGTACATGTGGTAAATCTTTTCCACTAGATCCACTAGAAGTTTTACATATTAGTAAAACTTATTAGTCATAGTTATTTTATCATTTCTTTCTGATAGTTTCACATCCACGTCATCTCTGGCTCTGGTTAAGCTGATTGCTTTGTCTCTTAATAACGTTCTCACCCTGTATGTGTATGTGTCTCATGATTTTTTACTAAATATTAAACATTTTGTGTAAAACAGGAGACTGATGTAAATAGCATGTATACCTGGAAGTAGGCATACCTCCTTTCAGACAGCTACAGCAGAAAATTGAGTCAATTTAGTCAGTATCTGAGCTAGGTTTGAGTTTTTTGTTGCTTTGATTAAATTTCCTCTAGTGATGTCTTATGCTTAAAACTCAGATGCAAGTGATGGAGACTCTGTCTCAATATTTTGCTTCCTTCTCAGTTTTCAGACATCTCTATCCACTTGTACAACAGAGAGGATCTTTCTCTGTGGTCTCACCCCTTCCACAATGACAGACTGCTCTTTCTTGTTAATCAGTTCTTGCTAGTCTGGGGTTGGGGGTTAGGGGAGTTCTCCCTTGTCCTGAAACAGCCTCAGTCTTAGATAGAGCTTATACGTGTGGGCCTCAGGGGTGAAGTTTTCTGCCCTTCCTTCCCAAGGCAGGCAGTCAAACACCACCTTTTATCTATAGCAGGTCTTAGCTAGGAGAGTTTCCTTCCTCTCCTCCAGGAGTAGTATAATAGTGTTGATATGGAATCCTGGGTTCAGGACTCTTTCTTACCCCTTTGCCAGGACTAGAGGGTTCTCTCCCTTTCTCCTTTTCCCAGCAACAAGGTGTTTCTACCTGTGCTCTGAGTCCATAGGGTTTACTGCCTCTCCCTAGAAGCTTAGGGCTTTGGAGAGAAGAATCCAAGCAGAGGAGGGGCTTTGTGACATTCCCACAGTGGTGGCTGATCCACACCAGGGTTTTCCTGGCAATTGTATGTTTTTGTTTGCCTAAGAAGAACTTCAGAATCAACCTATGAAGCTGGAGGTGAAAAAAAATCTGTGGTATATTTATCACTATATATTCACACTTTACTTGGTGAGAAGTGGTATTATTAATATGCTCAGTTCTAGCCAAGAACAAAGTATATCTTTTTTATTTGTTCAAATCTACTTTTATATCTTTCAGGCATATTTTAAAGTTTTCTTCACAAACTTTTTTTTGTTAGTTTACCTTAAAGTACTATATATATTTTTTTCATCTCTTATATATTTGTATATACATTCATCTCTATGCTATATATATAAATATATATATACACACACACACAGTGGCTCTTATGACTCTTATAAATGATGGGGGTTTTTCTGATGCCCCCAAATCCCAAATCCGGGTCAGAATAGACTCTCAAGGCAGATTTACACGTTGGTTTTCCAATTCTGTAGTCAGTCTTGTGATCCAAGACTAGAATATCTTTCTCTCAAGGCTTTAATGATGATATTTTTTAAAGTCCTTATTAAGGAAAATCTTACCAGTAGAGATTAGAAGCCCCTGAGTTCTTCCTGTTCTTTTGGTTGGCTCATTTCACGGGTCCAACTGAGCAGAGGTGGGCCATGAAACACAGCTAAAGTGCTTCATAGCACTTTAGCTACGGGGGATATCCTTGTTTTCTGGCTGGTCAAGAATCCTAATGATGGCAGGCAGTGGGGGATAACAGTGCTATAATCCAGATAGGCTGGCCTTCAGGGGATGGAAACTGGGTAACGTGTTCTCTGAGTTAATCCCATTTCTTGCTATTCAGCACCATCAAATTCAACACACATAGACACTGGCAAAACATGTTTAGTTTAGTTTAATTACAGCTGAGTCCCCCCTTTCTCAGTGACTCTACGGGACCCCTGGTAAATGATACTTCCCTGAACTGTTATGGTGCATGGGATATAGACAAAATTAAAAGATCATTAGAGTGTTTCAGAAAACCAGGAGGCACTTTGGCACCAGGTGCTGGCCTAGCAGTTTTGGTTAAGGAGGTGATTTGCACATAGATGTACCACCAGGAAGAGGCCAAGGCATGGTCAAGAACGGCATGGGGGAGGCGTGGAGGACTGATGCTAAGGGGAGAAGCCAGATGACTGACTCCAAAGAGCTCCACAGTGTAGCCTCTTTACCCTGCAGATTTTGTGTGTGGCTGAGTTTGGCCTTTAACCTTACAGGCTCTGACACAGGACTGCAGGGCTCCATCTCTCAAGACAGACTGGTATTCACTGAAGCACAACACTGATTATATCATCAGAATAAACAGGTGCTATGGCAGCGATCTTCATTGGCATTATCAGGAGAGCTTGTTACAATGCAGATTGGGGGCTCAGCTCCAGAGTTTCTCATTCAGTAGATCCAGGTTGGACATCAGAATCTGTATGTTTAACCATCTCTCAGGTCCTGTTGGTGCTGCTGGCATTGGACATCCAGTATTTACAACTTGAATT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9042:HG2_PB_pbsv_5004:HG2_PB_PB10Xdip_21614:HG4_PB_pbsv_5037:HG4_PB_SVrefine2Falcon1Dovetail_3045:HG3_PB_SVrefine2Falcon1Dovetail_3090:HG4_PB_SVrefine2PBcRDovetail_2546:HG2_PB_SVrefine2PB10Xhap12_3640:HG4_Ill_SVrefine2DISCOVARDovetail_3840:HG3_PB_SVrefine2PBcRDovetail_2280:HG3_Ill_SVrefine2DISCOVARDovetail_3888:HG2_PB_SVrefine2PBcRplusDovetail_8411:HG2_PB_SVrefine2Falcon2Bionano_2418:HG2_Ill_SVrefine2DISCOVARplusDovetail_9865:HG2_10X_SVrefine210Xhap12_3677;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3677:HG2_Ill_SVrefine2DISCOVARplusDovetail_9865:HG2_PB_SVrefine2Falcon2Bionano_2418:HG2_PB_SVrefine2PBcRplusDovetail_8411:HG3_Ill_SVrefine2DISCOVARDovetail_3888:HG3_PB_SVrefine2PBcRDovetail_2280:HG4_Ill_SVrefine2DISCOVARDovetail_3840;NumExactMatchSVs=7;ClusterMaxShiftDist=0.067525;ClusterMaxSizeDiff=0.067388;ClusterMaxEditDist=0.202403;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=7123;DistBack=33682;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=4:155078196-155078199;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4179.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:115:1/1:0:6:1:9:./.:0:0:0:0:1/1:0:32:1/1:0:706:.:7039:.
chr4	155110633	HG4_Ill_manta_1261	G	GCTGAAACCAACTCATCCCCACTCTGGTCTCATTTCCTCTCCTTGGATAACAGTCACAGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3678:HG4_PB_pbsv_5038:HG2_PB_PB10Xdip_21615:HG3_PB_pbsv_4863:HG3_PB_HySA_7736:HG4_PB_SVrefine2PBcRDovetail_2547:HG2_PB_pbsv_5005:HG4_PB_SVrefine2Falcon1Dovetail_3046:HG4_Ill_svaba_6577:HG4_Ill_manta_1261:HG4_Ill_SVrefine2DISCOVARDovetail_3841:HG4_Ill_Krunchall_7490:HG4_Ill_GATKHC_8495:HG4_Ill_GATKHCSBGrefine_3568:HG4_Ill_250bpfermikitraw_7089:HG4_Ill_150bpfermikitraw_6791:HG3_PB_SVrefine2Falcon1Dovetail_3091:HG3_Ill_svaba_6567:HG3_Ill_manta_1167:HG3_Ill_SVrefine2DISCOVARDovetail_3889:HG3_Ill_Krunchall_7086:HG3_Ill_GATKHC_8429:HG3_Ill_GATKHCSBGrefine_3392:HG3_Ill_250bpfermikitraw_6810:HG3_Ill_150bpfermikitraw_6643:HG2_PB_SVrefine2PBcRplusDovetail_8412:HG2_PB_SVrefine2PB10Xhap12_3641:HG2_PB_SVrefine2Falcon2Bionano_2419:HG2_PB_SVrefine2Falcon1plusDovetail_9043:HG2_PB_HySA_9435:HG2_Ill_svaba_6456:HG2_Ill_scalpel_4970:HG2_Ill_manta_1425:HG2_Ill_SVrefine2DISCOVARplusDovetail_9866:HG2_Ill_Krunchall_7221:HG2_Ill_GATKHC_8433:HG2_Ill_GATKHCSBGrefine_3417:HG2_Ill_250bpfermikitraw_7050:HG2_Ill_150bpfermikitraw_6576;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3678:HG4_PB_SVrefine2PBcRDovetail_2547:HG4_PB_SVrefine2Falcon1Dovetail_3046:HG4_Ill_svaba_6577:HG4_Ill_manta_1261:HG4_Ill_SVrefine2DISCOVARDovetail_3841:HG4_Ill_Krunchall_7490:HG4_Ill_GATKHC_8495:HG4_Ill_GATKHCSBGrefine_3568:HG4_Ill_250bpfermikitraw_7089:HG4_Ill_150bpfermikitraw_6791:HG3_PB_SVrefine2Falcon1Dovetail_3091:HG3_Ill_svaba_6567:HG3_Ill_manta_1167:HG3_Ill_SVrefine2DISCOVARDovetail_3889:HG3_Ill_Krunchall_7086:HG3_Ill_GATKHC_8429:HG3_Ill_GATKHCSBGrefine_3392:HG3_Ill_250bpfermikitraw_6810:HG3_Ill_150bpfermikitraw_6643:HG2_PB_SVrefine2PBcRplusDovetail_8412:HG2_PB_SVrefine2PB10Xhap12_3641:HG2_PB_SVrefine2Falcon2Bionano_2419:HG2_PB_SVrefine2Falcon1plusDovetail_9043:HG2_PB_HySA_9435:HG2_Ill_svaba_6456:HG2_Ill_scalpel_4970:HG2_Ill_manta_1425:HG2_Ill_SVrefine2DISCOVARplusDovetail_9866:HG2_Ill_Krunchall_7221:HG2_Ill_GATKHC_8433:HG2_Ill_GATKHCSBGrefine_3417:HG2_Ill_250bpfermikitraw_7050:HG2_Ill_150bpfermikitraw_6576;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.285714;PBcalls=13;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=59;DistBack=32434;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=59;REFWIDENED=4:155110634-155110692;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:96:1/1:2:18:0:23:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr4	155567476	HG3_Ill_Cortex_2785	A	AACCAATATTGGTTTTAACTGTCTGCATTAAAAAAAAAAACACAATAGCTTTTTTATTTGTATAAAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_5007:HG4_PB_assemblyticsfalcon_19773:HG2_PB_PB10Xdip_21616:HG2_Ill_breakscan11_3500:HG4_Ill_svaba_6581:HG3_Ill_svaba_6572:HG2_Ill_svaba_6459:HG4_Ill_scalpel_4876:HG4_Ill_manta_1262:HG4_Ill_Krunchall_7495:HG4_Ill_GATKHC_8501:HG4_Ill_GATKHCSBGrefine_3571:HG4_Ill_Cortex_2778:HG4_Ill_250bpfermikitraw_7094:HG4_Ill_150bpfermikitraw_6795:HG3_PB_assemblyticsfalcon_20169:HG3_Ill_scalpel_5056:HG3_Ill_manta_1168:HG3_Ill_Spiral_5550:HG3_Ill_Krunchall_7091:HG3_Ill_GATKHC_8435:HG3_Ill_GATKHCSBGrefine_3394:HG3_Ill_Cortex_2785:HG3_Ill_250bpfermikitraw_6815:HG3_Ill_150bpfermikitraw_6648:HG2_PB_assemblyticsfalcon_20248:HG2_PB_assemblyticsPBcR_19598:HG2_Ill_scalpel_4972:HG2_Ill_manta_1427:HG2_Ill_SpiralSDKrefine_12848:HG2_Ill_Krunchall_7225:HG2_Ill_GATKHC_8438:HG2_Ill_GATKHCSBGrefine_3420:HG2_Ill_Cortex_6608:HG2_Ill_250bpfermikitraw_7055:HG2_Ill_150bpfermikitraw_6581:HG4_PB_pbsv_5040;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6581:HG2_Ill_250bpfermikitraw_7055:HG2_Ill_Cortex_6608:HG2_Ill_GATKHCSBGrefine_3420:HG2_Ill_GATKHC_8438:HG2_Ill_Krunchall_7225:HG2_Ill_SpiralSDKrefine_12848:HG2_Ill_manta_1427:HG2_Ill_scalpel_4972:HG2_PB_assemblyticsPBcR_19598:HG2_PB_assemblyticsfalcon_20248:HG3_Ill_150bpfermikitraw_6648:HG3_Ill_250bpfermikitraw_6815:HG3_Ill_Cortex_2785:HG3_Ill_GATKHCSBGrefine_3394:HG3_Ill_GATKHC_8435:HG3_Ill_Krunchall_7091:HG3_Ill_Spiral_5550:HG3_Ill_manta_1168:HG3_Ill_scalpel_5056:HG3_PB_assemblyticsfalcon_20169:HG4_Ill_150bpfermikitraw_6795:HG4_Ill_250bpfermikitraw_7094:HG4_Ill_Cortex_2778:HG4_Ill_GATKHCSBGrefine_3571:HG4_Ill_GATKHC_8501:HG4_Ill_Krunchall_7495:HG4_Ill_manta_1262:HG4_Ill_scalpel_4876:HG4_PB_assemblyticsfalcon_19773;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0882353;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.218978;PBcalls=7;Illcalls=30;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=67;DistBack=3;DistForward=66564;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:155567475-155567477;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:65:./.:0:1:0:0:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr4	155639328	HG2_PB_SVrefine2Falcon1plusDovetail_9044	G	GACTTTTTATCTGCATAATAAGACAATCTGTATTCATCACACATTTCCTCCCCTCACCCTCCTGCAACCTCTCTCTACCATCCACTAGAAGCACCATGCCCCTATTCCTTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3679:HG2_PB_pbsv_5008:HG2_PB_HySA_9437:HG2_PB_PB10Xdip_21617:HG4_PB_HySA_7517:HG2_PB_SVrefine2Falcon2Bionano_2420:HG4_PB_SVrefine2PBcRDovetail_2548:HG2_PB_SVrefine2PBcRplusDovetail_8414:HG2_PB_SVrefine2PB10Xhap12_3642:HG4_Ill_GATKHCSBGrefine_3572:HG2_PB_SVrefine2Falcon1plusDovetail_9044:HG2_Ill_SVrefine2DISCOVARplusDovetail_9868:HG2_Ill_GATKHCSBGrefine_3421;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3679:HG4_Ill_GATKHCSBGrefine_3572:HG2_PB_SVrefine2Falcon1plusDovetail_9044:HG2_Ill_SVrefine2DISCOVARplusDovetail_9868:HG2_Ill_GATKHCSBGrefine_3421;NumExactMatchSVs=5;ClusterMaxShiftDist=0.263415;ClusterMaxSizeDiff=0.243902;ClusterMaxEditDist=0.302439;PBcalls=9;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=110;DistBack=-110;DistForward=47;DistMin=-110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=4:155639329-155639441;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:44:./.:1:0:0:0:./.:0:0:0:0:0/1:16:20:./.:.:.:.:.:.
chr4	156270399	HG2_Ill_SVrefine2DISCOVARplusDovetail_9869	C	CATTGTGACTAAGGCTTGGCAGAAGGCAGGAGACAAGAAACGGAAGAGGGGCACCAGGTGAGAAAAAAATGCATGAGGACTAAGATTATATGGGGCTTGGCAGGCCATGTTAACATGCAGAACTCAGGTAAAAGAATTCAACGAATGACACAGAAGCCAGGCAGAGAAGTGAGGGGAACACCAGGGAAGCATGACAGCCAAAGGAGGTGACAGCTGCAGGATGAGGAAATCAACACTGTAGAATGCTGAGATACTCTGAAATGGGACAGAAACACACAATAGACCGTCTAGATGCAAACCTGTAACTTTCAAAGTGTGATTTTGGTGTAGTGATGAGGACAAAGACAAAACTGAAGTGGGAAGTGAATGAAAAGGATATAAGGAACTAAGGAAGTATAAGTAAAACTTTCTAGATGTTTCACTATAAAGAAAAGCAGACAAAAGTAGGCCCACAGACAGAGAGAAATGCAGAGTTCAGAGAGTGTATTTTTATGGAAGATTATGTATCCTGGAACATGATGGGAACAATTCAGAACAGTAGAAATAATGATGATTCACAGAAGTGGAATGGTAAATTTATATTTTATTGCTTGATAGGGATAGTCCTACTTCATATTATTCTCATATTATATCCCATATTTTTATTCCACAGATGAATTTGAGAATCATTTCATTTCCCTTCATGTCCTCCCGTCAAAGAAATAACTAAGTATCTGCGCCTAATACGCAGTCTAATACGTCCAATACGCAGATACTTAGTTATTTCTTTGACGGGAGGACATGAAGGGAAATGAAATGATTCTCAAATTCATCTGTGGAATAAAAATATGGGATATAATATTTTATAGTATAATAATACTTGAAATATTAGTAGGATCTGGTCTTTCCATCTTACAACTTGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3048:HG4_PB_pbsv_5044:HG4_PB_HySA_7525:HG2_PB_HySA_9441:HG3_Ill_Spiral_5557:HG4_Ill_Spiral_414:HG2_Ill_Spiral_367:HG2_PB_pbsv_5012:HG3_PB_pbsv_4869:HG3_PB_HySA_7740:HG2_PB_assemblyticsPBcR_19602:HG2_PB_PB10Xdip_21620:HG3_Ill_MetaSV_3925:HG2_PB_SVrefine2PBcRplusDovetail_8415:HG2_PB_SVrefine2Falcon2Bionano_2422:HG2_PB_SVrefine2PB10Xhap12_3644:HG4_Ill_SVrefine2DISCOVARDovetail_3844:HG4_Ill_GATKHCSBGrefine_3577:HG4_PB_SVrefine2PBcRDovetail_2549:HG2_Ill_MetaSV_3751:HG2_PB_assemblyticsfalcon_20253:HG4_PB_assemblyticsfalcon_19779:HG3_PB_assemblyticsfalcon_20174:HG3_Ill_SVrefine2DISCOVARDovetail_3891:HG3_PB_SVrefine2PBcRDovetail_2282:HG2_PB_SVrefine2Falcon1plusDovetail_9046:HG4_Ill_MetaSV_3928:HG4_Ill_GATKHCSBGrefine_3576:HG2_Ill_SVrefine2DISCOVARplusDovetail_9869:HG3_PB_SVrefine2Falcon1Dovetail_3093;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9869:HG4_Ill_GATKHCSBGrefine_3576:HG4_Ill_MetaSV_3928;NumExactMatchSVs=3;ClusterMaxShiftDist=0.178151;ClusterMaxSizeDiff=0.178151;ClusterMaxEditDist=0.22699;PBcalls=19;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=901;DistBack=20723;DistForward=57;DistMin=57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=59;REFWIDENED=4:156270400-156270458;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4183.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:103:1/1:1:37:0:40:./.:0:0:0:0:1/1:0:27:0/1:17:89:.:878:.
chr4	156493549	HG4_Ill_SVrefine2DISCOVARDovetail_3847	A	ACTCAGAAACAAAAGGAGAATTTAAGAGTCATGCTGAGAGAAACACAAACACTGCAAGGGACAGGCTCTGCGGGACCTGGGAGAGAAACTGTGAGAGAAGTTGAT	20	PASS	ClusterIDs=HG4_PB_pbsv_5046:HG4_PB_assemblyticsfalcon_19780:HG2_PB_pbsv_5015:HG3_PB_assemblyticsfalcon_20177:HG2_PB_assemblyticsfalcon_20256:HG2_PB_assemblyticsPBcR_19606:HG2_Ill_breakscan11_3501:HG2_PB_HySA_9444:HG3_PB_pbsv_4872:HG2_PB_SVrefine2Falcon2Bionano_2423:HG4_PB_SVrefine2PBcRDovetail_2550:HG4_PB_SVrefine2Falcon1Dovetail_3049:HG4_Ill_svaba_6587:HG4_Ill_manta_1265:HG4_Ill_SVrefine2DISCOVARDovetail_3847:HG4_Ill_MetaSV_3929:HG4_Ill_GATKHC_8514:HG4_Ill_GATKHCSBGrefine_3579:HG4_Ill_Cortex_2781:HG4_Ill_250bpfermikitraw_7103:HG4_Ill_150bpfermikitraw_6805:HG3_PB_SVrefine2PBcRDovetail_2283:HG3_PB_SVrefine2Falcon1Dovetail_3094:HG3_Ill_svaba_6577:HG3_Ill_manta_1172:HG3_Ill_Spiral_5560:HG3_Ill_SVrefine2DISCOVARDovetail_3893:HG3_Ill_MetaSV_3926:HG3_Ill_GATKHC_8445:HG3_Ill_GATKHCSBGrefine_3401:HG3_Ill_Cortex_2788:HG2_PB_SVrefine2PBcRplusDovetail_8416:HG2_PB_SVrefine2PB10Xhap12_3645:HG2_PB_SVrefine2Falcon1plusDovetail_9047:HG2_Ill_svaba_6466:HG2_Ill_manta_1432:HG2_Ill_SpiralSDKrefine_12858:HG2_Ill_SVrefine2DISCOVARplusDovetail_9871:HG2_Ill_MetaSV_3752:HG2_Ill_GATKHCSBGrefine_3428:HG2_Ill_Cortex_6611:HG2_10X_SVrefine210Xhap12_3682:HG2_PB_PB10Xdip_21624;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3682:HG2_Ill_Cortex_6611:HG2_Ill_GATKHCSBGrefine_3428:HG2_Ill_MetaSV_3752:HG2_Ill_SVrefine2DISCOVARplusDovetail_9871:HG2_Ill_SpiralSDKrefine_12858:HG2_Ill_manta_1432:HG2_Ill_svaba_6466:HG2_PB_SVrefine2Falcon1plusDovetail_9047:HG2_PB_SVrefine2PB10Xhap12_3645:HG2_PB_SVrefine2PBcRplusDovetail_8416:HG3_Ill_Cortex_2788:HG3_Ill_GATKHCSBGrefine_3401:HG3_Ill_GATKHC_8445:HG3_Ill_MetaSV_3926:HG3_Ill_SVrefine2DISCOVARDovetail_3893:HG3_Ill_Spiral_5560:HG3_Ill_manta_1172:HG3_Ill_svaba_6577:HG3_PB_SVrefine2Falcon1Dovetail_3094:HG3_PB_SVrefine2PBcRDovetail_2283:HG4_Ill_150bpfermikitraw_6805:HG4_Ill_250bpfermikitraw_7103:HG4_Ill_Cortex_2781:HG4_Ill_GATKHCSBGrefine_3579:HG4_Ill_GATKHC_8514:HG4_Ill_MetaSV_3929:HG4_Ill_SVrefine2DISCOVARDovetail_3847:HG4_Ill_manta_1265:HG4_Ill_svaba_6587:HG4_PB_SVrefine2Falcon1Dovetail_3049:HG4_PB_SVrefine2PBcRDovetail_2550;NumExactMatchSVs=32;ClusterMaxShiftDist=0.102804;ClusterMaxSizeDiff=0.102804;ClusterMaxEditDist=0.252252;PBcalls=17;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=104;DistBack=2430;DistForward=69613;DistMin=2430;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=4:156493550-156493552;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:87:1/1:0:51:0:29:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr4	156878445	HG3_PB_SVrefine2PBcRDovetail_2284	T	TCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCATTGCAGCCTCAGCCTCCCAGGTAGCTGGGATTACAGGCAAGTGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGAAGTTTCACCATGTTGGCAAGGCTGGTCTCAAACAACTGACCTCAGGTGATCTGCCCGCCTCAGCCTCCCAAAGTGTTAGGATTACAGGTGTGAGCCACCGCACCCAGCCTTGTTTTTATTTTTACTTGAAACACAACACATTAATGTGTTTATTATGATTTACCACTGTGCTAAACATTTTGCAGATATTAACCTTAATTCCCCCTTGCAGAAGGTAGTATTATCATCGTTTCTGTTTTATAGATGAGAAAACTTAGGCAGAGAAAAGTTAAGTACTAATTGCATGAGATATTGCAAACCTCATATAATCAGCTAGAGATTATTAAATAATTTGAAACATAAACTGAGAAAAATGCTAGGGTTAATCTGGGGAAAATATTGGAATGAATACTAATTGTATAAGAGATTAGGTATTTAGTGAGTTTTTCACGATATGAAGAATTTTGCATCCCCACAACCTCATGATTGCAGGGTTTCAGATATTTAATACACTGATAAGAAGGAACCATGTCTATTACTGCTAATCCTTACAACAACCCAGCAAGGTAGAAATTATTGTTCTCACTTTACACATGAGGGAACTGACATGTATAGCGATTAGGGACTTATTCAAGATCCTAAGTAGTAAGTGGCCATGGTGAGATGTAAATTGAGCTGTCAGACTTCAGAGCTCATGCCTGTGTTTTCTTCTGCACCAGCCTGCTCTCGGGAAGTCCAAGGCCTATCTTGCTATTTGTCATTACTATTTCTATTTTATATTGGCTCTTCTTTATTAACATACCTTTGGTAGTACACTGTGAGCTTTTTATGTTCTAGTTTAACTTACAGGCAAGCGTGGCATTCGGTAATGGACGTGAGTCATTGTAGTCCCTCTGAGTTGAATTGTTCAGGCTTTTTTTCCCCCTTTTTAATTTTTTTTTCTATATTATGGGAAGGGACATTATTTCTCCAGGAAACTAATTGGCTTGTGTGTGAGTTGAAAAAGTTGATTATCTTTAATCTTAGATTTTACACCAGAATATTTTCCTAATGCCAGGAAATCCTCTTTTTTATTGTGGTTGTTAATTATGTTCATAGTCATTGCTTTGTTCTTAACTTCTTATAATGGTGACATTCCATAGGGATAATGTAAATCTTGAATAAGAAAATGAGTTACATAAATTTCTAGGTAAGAGATGTTCAAACTTCCTTTCTGGCTGAAATTGAAGAAATGCTGTCTGAACAGCCACTGCTAACAGGCAGGATTTGTCAGGTCGTAGAAATTGCTCATTCCCGTTTCTCAGCTGGAGGGGAAAGGTTGTAAGAGGGGTTGGCAAAAATGCCATAAAACAAAGGAAGACGTGGTAACTCCACCAGCCAACTCCTAACGACAAAGTAAATAGCATAAATGAAAAGCCATGATGTATACCTCTTTCTCCAAACAGTTAATGGAACAAAAAGCCCCAAGAAACACCTGAACTCAAGAGCAGTTTCTATGGAAACCTCAATCCATTTCTATTCTGCTGACATTTGAATAAATGTGAGCCGACGCGTGCTTTAGCTCAGTCCCATTACACACACTGTGGAGACAGCGCTAATGGGTTTATCTTAGAACCATTATTAACTACTCAGAGCAAAATCGCATCAGTTCTCCCCTCATAGACTTAAACTATTCCACAGTCTTAAGTACTTCTGAAAAATCTGGGATCAGTAGGCAAAACAACACTTTTGACATGACTACTATTTTGTAGGCTCCAAAAACTCGCTCTCCTACTCATGTAAAAATGTTAAAGAGCCAAAATTTGTCATTTTCATGCTCTAAGAAAATAACTCCGGTATCTTTAATGTGTCATTAACACTAATGCATGTCATTAATGCTAATGCTCCATTCTGCTTTAACAGCCCTCCATTTCCCTCAAGTTAGATGGAGACTGCAAGAATTACACACCTTTTGACTTCTATTGCCTGAGCAAAAATCACATTATCCCAAAGGAAGGATGCAAGAGAACGCAAGACTCACAGGGAAGACATACACCTAGAGAAAACTGTCTTTAGATAGAATTCATATAAAATAAGGTGACTCGTCCTAATTGTAAATCCTGCCTTCCAACTAACAATTATAGAAAACCCTGTAGCTCAGGCAGCATATGAGAAAGACAGCCAAAGAGGCAGTTAGCTCTAAAAAAATTTTGTTTCGGGCATAGTGGTGCACACCTCTAGTTCCAGCTACTCCGGAGGCTGAGGTGGAAGCAACTCTTGAGCCCAGGAGATCAAGGCTGCAGAAAGCCAAGATTGCACCCCTGCACTCCAGCCTGGGCAACAGAGTGAGACCTTGTCAAAAAAAAAAAAAAAAAAAAGACAAATTTTGTTTCATTGCTTTGAAGAACTATTTGGTTTAAATGATTTTTATTTGATCTTCATTTTAAATATCATATTGGTCCCCCTCATGGTCTCTAAGGTAATCTTCCAGCTAAGACCCCAGGTAATGTCAAATGACATAATATAGTAGATACAACACATTCTTGAATTCCAATTAACACGGATTCTTCTTCTTGTTTGTTTACTGGCTTTTGTGACCTTAGGAATGTTAGTTATCCTTCTTTAGCTTCTATTTCATTACCTGTAAATTGGAAATGATAATTTCTAGTTCTGGTGGTGTTCTGAAGGTCAGAGACAATGAATACAGAATGCTTGGATCATAGGTGTTCATTCATAATGGCAGTTATAATTGGCGATAAAGTTTCCTTTTGTGGTAAGATTTAGGATCAACATTATTAGACTTTACTCTCTTCATTGATAAGTCCTTGGACAAAAATAATTTTATATTTGAGGATCATCGCCCTTTCCTGTCTATTCTGCTTCTTAATGATTTTCTTTGCTAACATCAACATTGCATTAATAATTATATCATATTAGAAGTAGCTATCATTAATACTGGAGGAATATGGCAATTTTTTAATGACTTTACTTGTTTAGGTTTTATAAATACAGTAATTCCTCCCTAGCCATAATCTCTTTTTAGATATCTCGCTGATCCAGAAAACTTAGAGAATTTTTGTCTAAGGTGATGTTTCTAAGGTTGGAGATGTTTCGGGAAATAAGGTTTGGGGGTTTGGAATGGAAAAGAGAGGTAATATAGATAGCAGAGAGGGAAGTGTGATTTCTGCCATGGAATTTGGGGAGAGAAAATAGTAACTGGAGTGGAATTGCTAGCTTCCTGTATCTGCGCAGTGCTTTAAGAAGAGGCTCTAATGGCACGTGCTCTGGCATTCGGTTATAACGCGCAGAGATAAGACCATTAACTTCAACTCTTACAGAGGTAGTTAAGAAATAGGAAAGTCTAGATGTCTAGATACTTAACTTTCCTATTTCTTAACTACCTCTGTAAGAGTTGAAGTTAATGGTCTTATCTCTGCGCGTTATAACCGAATGCCAGAGCACGTGCCATTAGAGCCTCTTCTTAAAGCACTGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAAACATTAAAAAAAAAAAAAGAAATAGGAAAGTAAGTTAAACAAAGCCTAACCAAGCACAAGTCCTCCTCCCATGGGGGCTTTCTGAGGCTTAATCCACACAGCCAGGGAGTGACTGTGGTATAATTCAACAAAGCAGCCCAAGGAAAGAAAGTGGCTCAGAACCTAAGACTTTTAGGATTACTAGAAAAATGGAATGTGGAGGCTAGCAGAGCATGTCCAAATCCTGTAGCCCGCCTCTTTAATTTGCAGATGAGAAGTTTCCTAGTAAGATGAACATGCTCCTAAAATCACAGAGCTGGCACTTGGAGAGCCAGGGGTTGACACGGTGTCCTGCCTCCTACCATCCACCTCCTTCTGATATTTTAGGGTGCCTTGTTGAGTGGATAAGCCCCTCTCACTTTTAAAACTAGACTTACTACATTTATTTTCCTTTATGGAATTTAAAACACAGCCATTGTTCATCCGTCCCAGGAAGTCATACATAAAGTTATAAACTTGAAAAAGTTTTCCTGAATTACAAAACTTCAGACAGACCTATTCACCCTCACAAGTGATAAAGTTAGAACTGCCTAGAAAACTGGTACTCATTTGTTATGGCTACATGTTTTATCTCTTTATTCATGCCATGATTAAGAGTGAATATAGGGCTGGGTGCGGTGGCTCATGCCTGTAATCCTAACACTTTGAGAGGCTGCGGCGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGACCAACGAGGTGAATATTAATTATTAAATGAATGAGTATCGTACATTATTAAAAAACACGTGAACATTCTGTGAGCTAATTCTGTATCAGACGTTATGTTAATGCAGTTTTCACATATGTTACCTCATCACATTTCAAGCTTTCTATGTGCATTTCCTTGTGAATGTGTCCAGGAACGAGCTCTTATAAATATAAAATGGTTGAGTGGGAAGCTAGTGATGAAAGAGTTTGGGCTATGGAGTCACACAACTTGAGTTTGATGATGGCCTTACCATTTTATTTATTGTGGTGTCTTCGCCCATTCCCCAAAAGTGGTTTAATTTCTTCATCTGACAAATTATAGATAAAAAAAACCTATCTTAGAAAAATCAAATGAGATAAGATATGTAAAATATTTATGGTGCCTAGCACATGGTAGTGCTCATTACAATTAACTAATATTGGTATTCATGTTTGTAATATTATTTCTACATCAAAATTTTACATCACTATGAGTGAGTTAATGCTTGGCACTTTTGTAAATAGATGATTCAAATTGATTTGAGTATTGACTGTTTGTGAATTTTAAGCTCAAATGTAGGATTTCATTCATTATTCATTAAAACAAAATTTAAAAATGCACTTACCAGTTTTAGTAATCGTTTATGTGTTATTTCAAGTCTGACCACATGAGGGCAGCATGGTACCTTTTAAGACAAAGCATAGCCTAAGTGGAGGGAAAAAAAAATCTAGTATTAAAGCTATTAAAAATCATGGGTACAAAATTAAAACTAGAAGTCTCCATAATGATCTTCTTATCCAAACTTGAATTTTACAACTGAAAGAACTGAGGTCTAAGGAGGACAATTAGCAAGTCCAATCACACAACTGATATCTTTTGAAGGTAGAGCAAAGAACCATTCAACAGCATTAATAGTAGCAATAATAATTGCATTATTGGAGCACCTAGTTACTTTAAGAGACTTTTTATTAAGCACTAATATCTTGTGTGACAATACTTTAGAGGCAATCGAATGTTTCTGATAATGAATTAGCAAGAGGAATGTTCCTTTCTGAAGAAAGAGAAAATAAACAGAATCTTATTTCTAAAAGGACTTAAGTATGTTCTTGAAGGCAGAAGACTTAACTGCGTGATTTTTCAAGGTTGTTATTAATATTTTGCTCACAACCGTGTGTTTGTGAGCTGCCTTGACAGTGCAGCACTGTCTCCAAGAAGCCGCAGCAAACAAGAGAAGGGTTCTTATTGGTTTTGGCTAGAAATCTTCTAGCTTTCTTTCACCTACTTTTTCTCGTCATTCCCACCCCAGTTCCATAGTCAAACAAATCCATACACATATAAAGCCAGAATCATGCAAACAAATCCATACTCTCCCTTGGCAACACCACAGTGGGAGTGCTTTGGAGGGAGGGATGCTTTAACTTTGCAACTACAGTTGTTCTCGTACATATCCCTTCTCAAACTTCAAATAAACAGATGATCTGGATACATAGAATATGTTTACTCTACAATGCCACTCTCTCCATTTCTCTCTACCTCCTTAATATCTTTTCATTCTTTGCAGATCTTTCCTTTCTACTGCCATCGTTATCACTCATCTGTATTATTTCATCAGCCTCAGAAATCGGACACTGTGAGTGGTAGTTTATGTGTCAACTTGACCGGGCCATCGGATGCTTAGAGAGTTGATTACACATTATTCTAGGTGTTTCTGTGAGGGTGGTTTTTTGAATTCAAGATGATAGCCCTGTATGATATGGGCAGCCTCATGACCTTCCCTGAATGAGAGAGAAGTCTTCCCCTCTGACTGCCTTCTAAACTGGGACACAGGCTTTCTTCCTGCTTTCACACTCCAACTGATACATCAGTTCTTTCCGAGTCTCTAGTCTGCTGGCCTTTGGACTAGAGCTTTACCATAGACTCTCCTGGTTCTCAGGCCTTCTGACTGAGATTGGAACTAAACCATCAGCTCACCTGGGCCTCCAGCTTGCTGACCTGCCCTCGAGTTCTTCATAATTCCATGAGGTAATTCCTTTTAATCTCCCTCTATATATACATGTATATATCTTATTAGTCCTGTTTCTCTGGAGAACCTAATACAGACCATTATACTGTTTTCAATATATTTTCATTTGAAACTAGAGAGCCATTTGTACAATAATTTATGAATTAGGATTATATACTAATTCAACAAATAATGTATTAAATATAGAACCCCTACATCATGCTAAGCAGTAACCTTTAGTCCTCAATGGTCATCATTGTGTTTGGTGTTTAGCAGGCATTTAATAAATATGTGTTGAATGGGTGAATACATAAATTCCATCAGTTGTTTTGTGAAAGAATTTTTGCTTCTACTAGAGTGCCGGCGTTTTTTCTTCCATCTATATTAAGGTGATTAGTTTCTTGCAAAGAAAGTGCTAATCATTTTGTTGCTAGGAAACCACTTTGTCCAGCTGCAAAGGTATGTATATTATAGTTTTAGGACAAACGACAGAACAAGTTCCGAGTATGATTAACATAAAATAAAGAGGCTTAATATAGGTTAGTTTTCAGTCAATATGTTAGATCTTGAGATTTTTGATTAAATAAATCTATTAAAATCTGTATTGGTACTATGACTGTAAAGATTCCCATTTTTTACAGGTTATAACAATGAGAACCAAAGAGTGGTTTACTTCTGGTATGTATAGTTACTGAACGGTGGGGGAGTGATTTTTAGAAACCCAGTATTTGCTGTTTCTTCATGGGCACACTGCTCTGGAAGTCACCATCATCTATGTCAAAACTCCCTCAGGGACCCGGCCTCTGCCCACTCCCCTGAACCCCCAAGTACCATGCTCACCCTTGCTCCGTGGGTGTCAGGCAAGAGTCTTTTTTCCCCATGTCTCTTGAACACCACAGGCTCATTCACACATGACAGCCTCTTTCCTCTTTTCTGCAGAGCCTAGAAATCTCTTTTCGCAGTATCACACATTGCTGGCTTCTTCTCTTATTTTTCCTTTAGATTTCACCCAGATGTCTTCCTTGACCTCCCTATGTCAAGCGGTGCACATCTTGCGAGTCATTTTCTATCCTGTTTCCAAGTTTATATTCTTCATAAAACTTTATCCAAAAATATATTTTCTTTTCTTTTTTGAGACAGGGTCTCACTCTGTCGCCCAGGATGGAGAGCAGTGGTGTGATTAAGGCTCACTGCAGCTTCCACCTCCCTGGACTCAGGTTATCCTCCCACCTCAGCCTCCTGGGTTGCTAAGACTATAGGCATGTGCCACCACCCTCAGCTAATTTTTGTACTTGTGGATCTTGGGTTTTGCCATGTTGCCCAGGCTGGTCTCCGGCTCTTGGGCTCAAGTAATCGACCCATCTCAGCCTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACTGCACCCAGCCTTTCTTTTTAATTTGGTTTGCTCTTTCTGTCGATATCACTGGCAGACAGTATCTGTAAACTATATTGTCCATGATGACTGAAGCTGTCTCTACTGCTGGCCTTTACATTTTGAGTACTCAATGCCTAATATATACTAGATGTTCAATAAGTGTTCTCTGAAATGACTGACCTTTGATTCAATGAACAAATCATATGAAAATATAATCATGAGAATAAGACTTCTTTGAGATGCTAATCTGAAAAAGATTCAAGATTAAATTAAAAAGTACAACTTTAACTAAATGTTCTTTAAATCAGATAGTGCCATTATTTAAATTTATTGGCTAAATTTTTATGGAATTTCTGTACTTTCAAATTAGAAGAGTTTTTATGTATATGTTACTGGGATTCTTTATGAATAAAATATATATATGTGTTTAATGTAAAAAGATAACTTCGAGAAGTTCGAGACCAGCCTGGCCAACATGACGAAAACCTGTCTCTACTAAATATACAAAAACTAGCTGGGCATGTTGGCAAACACCTGTAATTCCAGCTACTCTGGAGGCTGAGGTTGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGTAGTGAGCCTAGATCGTGCCATCGCACTCCAGCCTGGGTGACAATAATGAAATTCCATCTCAAAAAAAAAAAGATAATTTCATAATGTCTCAAATACTTAATATCAGTTGAATAGGACTATACAAAACCCTTAAAGCTCATATTTGCCATCATTTGAGTGAGGTTACCAAGGTATCAAATATAGGGATGTATGTCATGTGAAAAGTAATTGTAAATCTTAGTGACAAAGGCTACAATAAAACATAAACTATCTTATTCTACTATATTTCATGACTTATTTGGTATTTAGGAAGCTCAACAGCTTATACTCATTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGTTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCTATCTCTGCTCACTGCAAGCTCGGCCTCCCAGGTTCACGGCGCGATCTCTGCTCACTGCAAGCTCTGCCTCCTGGGTTCATGCCGTTCTCCTGCCAGCCTTCCATGTAGCTGGGACTACAGGTGTCTGCCACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCTTGCTAGCCAGGATGGTCTTGATCTCCTGACCCCGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACACGCATGAGGCACCGCGCCAGGCCACTCACTCTTTGTTTTAAATAAAAATGTAGTATTTAAAATCAGATCATATATTTTTAAGTATATTGCTTAAGTAGTCTAGATTAATAACATTTTTGCTGATTTATGACTTTCCTATTTTGAGAATAAGCACTATCCTCCATAAGAAACTGGATAATTTAAAGGCAGGAAACACTCTGTAGTCATGGTTGTCAGGTTCTCGGTGCCAGATGCTTATGGTGAGAGCTTGACTATTGGGAGCACCTGACCCAGGTTAAGTGAGTAAAAATAAAGGGTTTGGTAAAAGTCAATATGTGAGGGAGAGCTGGAGCTAAACCCAGAAGAAAAGCTGCTGTTTGGTAAAACATTGCCAGAATACTAAACCAAATGAAGGCCAGGAGGGTGTGCTATGTAACTGAGTCATGGAAGCGTCCCTATCAGTGCCTGAAAGAAATAACTGAACAGTCATGGGGCTTCCCTGGCCTGGATCAGATGAGCCTGAGTCATCCTTATTAACCAGTTTAAATTTCCACATCCTGACCTCTTTTGCAATCATGATTTTCTTAGCATAGTGTTTATAAGTTATTATGAGATACTAGGTTTTATTCTCTCTCTCTTTACTTACATACATGGGGTAGATTGTATTATGAGTCCCTAATTTTCCCTTCTCTCCCCTACCTTCCATAGCTTCCCTGTGGGTGTAGTCTGTTTCCTTACCCCATTGACTTAGGGCTTGGCCAAGTGATAATTCCTCTGGCTAACGAAATAGTGACCAGAAATGATTATGTGCTTGTACCAAACTGATGCCTTGAGAGACACGTAAAGTTACCCCCAGTGCTCCTGGGATATCTGCCCTTTGCCACAAGTGGAGCCAGTCTCAGGAAATTATTGTTTTCTCAGCCTGGGTGCTGAAATGAAAACCCAAACGCATCTGAGGCCTGTGATCCACGCTAGGGCTGAAAGCCTAGGCAAGCCCAGTTGAGATAAGCCCAGTGGCAGATCCCCCACTAACATAGGAGTGTGGCAAAAGGATTGTTTTTATAACCCATGGGCATTACCTGATGTAATCTCTGGAAAAATCTAATTACAGAAGAAACCTGATTAATTCAGAAGAAACCTAATTAATTCACCAACTGATAAAGTACCATGAATAACATAGTGAATTTATTGAAGAAAAGATAAAATGATTAATAGAAAGAGTGCTTATAGGAATTAATATTGAATATTATTGACAAAAATGATATAATGACTATGCATTTATTTAAATAACCTGCTAGAGCTCTATAGGATGACTCTAAGAATTTACTGGTGACAATATCTAAAAACAACCAGGTTGGATGGGGCAACGCTGGTCTTTGAGCCACTGTATTTTTTTTTTAATGCCATAAAGCAATTCTGTGGCAAGATTCTATTTTAGGAAAGGGTAGATAAGTAAAATTTACCAGGACGCTGGTACCTGAACATTGTGATCATAGAATTTGATTTTTCCAGCGAGCTCTTTAGAATAGTACATGTCCCATGTACAAAGTTATGTATGAAACTGTTGATTCTTCTAATGTGGAAAGCCTCTCATTATTCCTCTGTATTGTAATAGATCAATCCTATGATTTTTTTTGTACTACATTCTTCTTTATTAGACTCTATCTCTTCCAAACAGGTAAAGAATTAGAGCAATATTCTTATCTTTGAAAGCATGTGTGCTGGCCGGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTCGGGAGTCTGAGGCGGGCTGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAAAATGGCATAACCCCATCTCTGCTAAAAATACAAAAATTAGCTGGGCTTGGTGGCAGGTGCCTGTAATCCCAGCTACTCAGGAGGCTAAGGCAGAAGAATCGCTAGAACCCGGGAGGCAGAGGTTGCAGTGAGTAGAGATCGTGCCACTGCATTCCAGCCTGGGTGACATAGTGGGACTCCATCTCAAAAAAAAAAGGAGCATGTGTGCCACAAATAAAGGCCATGTTGGCTGCATTTGTCTATGTTTCCAAATTGCTGGCATTTTATTCATGTGTGTTGATGCTTTTCTTTAGGTTTCCTATTTAATTTTCGATACGGTGAAGGCAGAGACTGTTGCTCTCTTTAAAGTTACCCATGGGACATGCTAGAAAGGTTTGTGGAAAGTGAGTATTAAGTCATTGTTGCTGATTGCCTCTCTTCTACACCTTGCTATTACAGACCTGGCCAAAGACTTTGTTTAAATGAATCCTGTCTTTTTTTTCCAGCTAAGCTAATAATCACCCTTCTGGAAGAGGTTAATTTTGGTCTTAAAAACAAGCAGTAAGTATGCATCACACATTGAAGGAAAGCTGTAGTTAGTAAACACATTAAAACAATGTAAACTAAAGGCCAGATTATTTTACTCCTCTGAAAATTCAGACAATCTGGAGTTTCAAAAACGTTTTTATTTCATCATCTTGATCTATATGATCATTTCACACATCAGTAAGTGATGCTTTCATTTTTTTTAAAGTAGCATAACTATCCCAAACCTGGAAAATTTCAGTAACACTAAAAATAAACCAGTTAAATAAACATAGGGACATTTTCAAAGATAGTTTGGGACATAAATACTTTAAAAATCTGCCCCACCTGCAACTGTGAAGTATTGATTCTGAGGCTTTTCAAAGTTATGCACTATACAGTTCATACTGTAATATGAATTAAAGGGGCTAGGAGAATAATGGCACTAGTTTTTTTATAAGCTGATTTTTATGATATTAATATAATTTCTTAAAAAACCTTCAACTCAACTGCGTAAGTTCCTGACATTAAATGCAATTTTTTTCAACTATCAAATTACAGACCATGTATTTGTAAAATCTAAAAAGGAATAAACTTTTGTGTGTTATGGTGGGATATTTAGTTTCTGTAGTGATTGAAATTACTTTTAAGTGTCACTTTTATTCTCTGTATAGTAGATTTCCATAATATACACCTATTAGAGACACCTTTCAAGACAATGCTAACACAATTGCCAGCTTTAAAGATATTGAAAACTTAAAAAAATCATTTCTCTGTTTTAATGAGGGCAATACTGTCATATTGTAGTAAGATTTTTGTTCATATTAAATTGAAGCAACATCTGCACAGCAAGATAAATAATCAGAAGGGTAAACAGACAACCAATAGAGTGGGAGAAAATATTTGCAAATTATGCATCCGACACAGAACTAATATCCAGAATCTACAGGAAACTCAAACAAATCAGCAAGAAAAAAAAAAAAAACAAATAATTCCATCAAAAAGTGGTCAAAGGACGTGAATAAACAATTCTCAGAAGAAGATATATAAACAGCCAACAAACATATAAAAAAATGCTCAACCTTACAAATTATCAGGGAAATGCAAATTAAAACCAATGCCATACCACCTCACTCCTGCAAGAATGGTCATTATTAAAAAGTCAAAGAACAGTAGATGTTGGTATGGATGTGATGAGAAGGGAATATTTTACAGTGCTGGTGAGAATGTAAGCTAGTACAACCACTATGAAAAACTGGAGATTCCTTTTTCTTTTTTTTTTTTTTTTTCTTTTCTTCGAGACAGTATCTCGCCCTGTCAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_21625:HG2_PB_SVrefine2PB10Xhap12_3646:HG2_PB_SVrefine2PBcRplusDovetail_8417:HG3_PB_SVrefine2PBcRDovetail_2284:HG2_PB_SVrefine2Falcon2Bionano_2425:HG4_PB_SVrefine2PBcRDovetail_2552:HG3_PB_SVrefine2Falcon1Dovetail_3095:HG2_PB_SVrefine2Falcon1plusDovetail_9048:HG4_Ill_SVrefine2DISCOVARDovetail_3851:HG4_PB_SVrefine2Falcon1Dovetail_3051;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_2284;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00308361;ClusterMaxSizeDiff=0.00308361;ClusterMaxEditDist=0.00498122;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=12657;DistBack=40844;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=4:156878446-156878500;PctSeqSimilarity=0.9992;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:96:1/1:1:26:1:28:./.:0:0:0:0:1/1:0:23:1/1:0:517:.:12681:.
chr4	156956820	HG2_Ill_svaba_6473	A	AATGTATGCATACATAAATATGTATACATAAAAAATGTATGCATACATAAATATGTATACATAAAAAATTTATGCATACATAAATATGTATACATAAAAC	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6600:HG4_Ill_svaba_6594:HG4_Ill_250bpfermikitraw_7111:HG4_Ill_150bpfermikitraw_6813:HG2_Ill_svaba_6473:HG2_Ill_250bpfermikitraw_7072;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6600:HG4_Ill_svaba_6594:HG4_Ill_250bpfermikitraw_7111:HG4_Ill_150bpfermikitraw_6813:HG2_Ill_svaba_6473:HG2_Ill_250bpfermikitraw_7072;NumExactMatchSVs=6;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=99;DistBack=32;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=4:156956789-156956839;PctSeqSimilarity=0.8819;PctSizeSimilarity=0.7273;PctRecOverlap=0.5455;SizeDiff=27;StartDistance=32;EndDistance=32;GTMatch=0;TruScore=71;MatchId=4186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:33:0|1:27:8:5:22:./.:0:0:0:0:0/1:26:18:./.:.:.:.:.:.
chr4	157447967	HG2_PB_SVrefine2Falcon1plusDovetail_9054	CTT	TAGGTGGTTTGAAAAGTTACTACCATTTCATAAAGAACTTAAAAAACAGGAATGGGAACATCACACACCGGGGCCTGTTGTGGGGTGGGGGGAGGGGGAGGGAATAGCATTAGGAGATATACCTAATGTTAAATGACGAATTAATGGGTGCAGCACACCAACATGGCACATTATACATATGTAACTAACCTGCACGTTGTGCACATGTACCCTAAAACTTATAAAGTATAATAAAAAAATCATAATATTTCTTAGAAGAAAGTTTTGATAGATTTCCCCATTAGAGAGGTTTTCTAAAAGGTATAATGGTGACTGATATTTTA	20	PASS	ClusterIDs=HG3_PB_pbsv_4878:HG3_Ill_SVrefine2DISCOVARDovetail_3904:HG3_Ill_GATKHCSBGrefine_3411:HG2_Ill_GATKHCSBGrefine_3437:HG2_PB_SVrefine2Falcon2Bionano_2431:HG2_PB_assemblyticsfalcon_20271:HG2_PB_SVrefine2Falcon1plusDovetail_9054:HG2_PB_HySA_9464:HG2_PB_pbsv_5022:HG3_Ill_MetaSV_3929:HG2_Ill_MetaSV_3756;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9054:HG2_PB_assemblyticsfalcon_20271;NumExactMatchSVs=2;ClusterMaxShiftDist=0.180354;ClusterMaxSizeDiff=0.15781;ClusterMaxEditDist=0.302738;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=-1;DistForward=124015;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:157447970-157447966;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=2;GTMatch=0;TruScore=99;MatchId=4187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:38:0|1:33:1:0:33:./.:0:0:0:0:0/1:31:13:0/1:7:22:.:.:.
chr4	157571985	HG2_PB_pbsv_5023	A	AACCGGCGGGCGCGGTGGCTCAACGCCTGTAATCCGCAGCACTTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGCGAGATCGTAGACCATCCTGGCTAACAGGTGAAACCCCGTCTCTAACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTTAGTCCCAGCTACTCGGGAGCCTGAGCAAGGAGAAATGGCGTGAAACCCGCAGGAAAAGCGGAGCCTTGCAGTGAGCGAGATTCCGCATTTGCAGTCCGCAGTACGGCCTGGGCGACAGAGGCGAGACTTGCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3060:HG3_PB_pbsv_4879:HG2_PB_pbsv_5023:HG2_Ill_breakscan11_3502:HG2_PB_HySA_9465;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_5023;NumExactMatchSVs=1;ClusterMaxShiftDist=0.083958;ClusterMaxSizeDiff=0.0809595;ClusterMaxEditDist=0.176301;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=344;DistBack=124015;DistForward=9712;DistMin=9712;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=4:157571975-157571988;PctSeqSimilarity=0.9545;PctSizeSimilarity=0.9738;PctRecOverlap=0.9536;SizeDiff=9;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=96;MatchId=4188.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:19:0|1:45:0:0:19:./.:0:0:0:0:0/1:23:3:0/1:7:24:.:.:.
chr4	157581699	HG2_Ill_SVrefine2DISCOVARplusDovetail_9879	G	GTCATCCAAACAAGAAGACTTACATATATCCCCAGAAGAGGACTGTGACTCTAGTAGCAATTACAGGCCTGCATTTTTCTGAAGCTCTGTCTTTGGAAGAGTCACTCCTGGCCAAGACAAAACAGTTGGTGACAACAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9055:HG3_PB_pbsv_4880:HG4_PB_HySA_7533:HG4_PB_pbsv_5056:HG2_PB_HySA_9466:HG2_PB_pbsv_5024:HG3_PB_HySA_7753:HG2_10X_SVrefine210Xhap12_3688:HG4_PB_SVrefine2PBcRDovetail_2559:HG4_PB_SVrefine2Falcon1Dovetail_3061:HG4_Ill_SVrefine2DISCOVARDovetail_3860:HG4_Ill_250bpfermikitraw_7118:HG3_PB_SVrefine2PBcRDovetail_2290:HG3_PB_SVrefine2Falcon1Dovetail_3100:HG3_Ill_SVrefine2DISCOVARDovetail_3905:HG2_PB_SVrefine2PBcRplusDovetail_8421:HG2_PB_SVrefine2PB10Xhap12_3653:HG2_PB_SVrefine2Falcon2Bionano_2432:HG2_Ill_SVrefine2DISCOVARplusDovetail_9879:HG2_PB_PB10Xdip_21631;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9879:HG2_PB_SVrefine2Falcon2Bionano_2432:HG2_PB_SVrefine2PB10Xhap12_3653:HG2_PB_SVrefine2PBcRplusDovetail_8421:HG3_Ill_SVrefine2DISCOVARDovetail_3905:HG3_PB_SVrefine2Falcon1Dovetail_3100:HG3_PB_SVrefine2PBcRDovetail_2290:HG4_Ill_250bpfermikitraw_7118:HG4_Ill_SVrefine2DISCOVARDovetail_3860:HG4_PB_SVrefine2Falcon1Dovetail_3061:HG4_PB_SVrefine2PBcRDovetail_2559;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0640569;ClusterMaxSizeDiff=0.0498221;ClusterMaxEditDist=0.289753;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=137;DistBack=-137;DistForward=12486;DistMin=-137;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=139;REFWIDENED=4:157581700-157581838;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:62:1/1:0:33:0:25:./.:0:0:0:0:1/1:1:22:./.:.:.:.:.:.
chr4	160813093	HG3_Ill_GATKHC_8495	C	CCTCCCTCCCCCCTCTCCCCACCCCCTTCTTCCATTCCCCCTTCCCACCTTCCCCCTTCCTTCATTCCCTCCTTTCCCCCTTCCCTCG	20	PASS	ClusterIDs=HG2_PB_pbsv_5040:HG2_PB_SVrefine2Falcon2Bionano_2443:HG2_PB_PB10Xdip_21650:HG4_PB_HySA_7574:HG3_PB_HySA_7808:HG4_Ill_svaba_6627:HG3_Ill_svaba_6618:HG2_Ill_svaba_6505:HG4_Ill_manta_1273:HG2_PB_assemblyticsPBcR_19649:HG2_PB_assemblyticsfalcon_20303:HG4_Ill_GATKHC_8566:HG4_Ill_GATKHCSBGrefine_3604:HG4_Ill_150bpfermikitraw_6849:HG3_Ill_GATKHC_8495:HG3_Ill_GATKHCSBGrefine_3427:HG2_Ill_GATKHC_8495:HG2_Ill_GATKHCSBGrefine_3451:HG2_Ill_250bpfermikitraw_7106:HG2_PB_HySA_9505:HG4_PB_pbsv_5071:HG4_PB_SVrefine2PBcRDovetail_2572:HG3_PB_SVrefine2PBcRDovetail_2307:HG3_Ill_SVrefine2DISCOVARDovetail_3920:HG2_Ill_SVrefine2DISCOVARplusDovetail_9892:HG2_10X_SVrefine210Xhap12_3704:HG3_PB_SVrefine2Falcon1Dovetail_3115;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7106:HG2_Ill_GATKHCSBGrefine_3451:HG2_Ill_GATKHC_8495:HG3_Ill_GATKHCSBGrefine_3427:HG3_Ill_GATKHC_8495:HG4_Ill_150bpfermikitraw_6849:HG4_Ill_GATKHCSBGrefine_3604:HG4_Ill_GATKHC_8566:HG4_Ill_manta_1273;NumExactMatchSVs=9;ClusterMaxShiftDist=0.225;ClusterMaxSizeDiff=0.225;ClusterMaxEditDist=0.320513;PBcalls=12;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=87;DistBack=-48;DistForward=4;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=77;REFWIDENED=4:160813087-160813163;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:24:75:1/1:1:22:1:13:./.:0:0:0:0:1/1:1:14:./.:.:.:.:.:.
chr4	161277324	HG2_Ill_SVrefine2DISCOVARplusDovetail_9894	C	CATATATATATTTTACATATATATAATATATTATATATAATATATATTATATAATATATATAATATATAATATATTATATATATTATATATAATTATATATATATTATATTATATATATAATATATTATATATATTATATATAATT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9894:HG2_Ill_manta_1443:HG2_PB_pbsv_5044:HG2_PB_SVrefine2Falcon2Bionano_2445;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9894:HG2_PB_SVrefine2Falcon2Bionano_2445;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0428571;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.171429;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=145;DistBack=1099;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=163;REFWIDENED=4:161277325-161277487;PctSeqSimilarity=0.9652;PctSizeSimilarity=0.9724;PctRecOverlap=0.3931;SizeDiff=4;StartDistance=-86;EndDistance=-86;GTMatch=0;TruScore=77;MatchId=4191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:31:./.:26:10:8:12:./.:0:0:0:0:0/1:8:3:./.:.:.:.:.:.
chr4	162704827	HG3_Ill_svaba_6634	T	TTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCTCTCTC	10	PASS	ClusterIDs=HG2_Ill_svaba_6515:HG4_Ill_svaba_6643:HG3_Ill_svaba_6634:HG3_Ill_GATKHCSBGrefine_3438;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_svaba_6515:HG4_Ill_svaba_6643:HG3_Ill_svaba_6634:HG3_Ill_GATKHCSBGrefine_3438;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=56;DistBack=3883;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=4:162704826-162704830;PctSeqSimilarity=0.8906;PctSizeSimilarity=0.8;PctRecOverlap=0.8028;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=83;MatchId=4194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:53:./.:21:18:6:22:./.:0:0:0:0:1/1:2:28:./.:.:.:.:.:.
chr4	163066110	HG2_PB_SVrefine2Falcon2Bionano_2451	A	AATTCATTATACAATGAATACAATATATATTCATTGTATGTATATTCATATACAATGAATACAATATATATTCATTGTATGTATATTCATATACAATGAATACAATATATATTCATTGTATGTATATTCATATACAATGAATACAATATATATTCATTGTATGTATATTCATATACAATGAATACAATATATATTCATTGTATGTAT	10	PASS	ClusterIDs=HG3_PB_pbsv_4915:HG2_PB_HySA_9524:HG2_PB_pbsv_5053:HG4_PB_SVrefine2Falcon1Dovetail_3083:HG4_PB_pbsv_5084:HG2_PB_PB10Xdip_21659:HG3_PB_SVrefine2Falcon1Dovetail_3122:HG2_PB_SVrefine2PBcRplusDovetail_8441:HG2_PB_SVrefine2PB10Xhap12_3674:HG2_PB_SVrefine2Falcon2Bionano_2451:HG2_PB_SVrefine2Falcon1plusDovetail_9075;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9075:HG2_PB_SVrefine2Falcon2Bionano_2451:HG2_PB_SVrefine2PB10Xhap12_3674:HG2_PB_SVrefine2PBcRplusDovetail_8441;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.047619;ClusterMaxEditDist=0.245863;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=206;DistBack=3061;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=108;REFWIDENED=4:163066111-163066218;PctSeqSimilarity=0.9976;PctSizeSimilarity=0.9951;PctRecOverlap=0.9662;SizeDiff=1;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=98;MatchId=4195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:59:1/1:6:18:2:17:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr4	164401510	HG2_Ill_scalpel_5026	A	ATATATTCTATATATATATTCTATATATATATATATATTCTATATATATTC	20	PASS	ClusterIDs=HG4_PB_pbsv_5097:HG4_Ill_manta_1277:HG2_Ill_manta_1447:HG4_PB_HySA_7603:HG2_PB_pbsv_5062:HG2_PB_HySA_9551:HG4_Ill_scalpel_4941:HG4_Ill_GATKHC_8607:HG4_Ill_GATKHCSBGrefine_3626:HG4_Ill_FB_4754:HG4_Ill_250bpfermikitraw_7189:HG2_Ill_scalpel_5026:HG2_Ill_GATKHC_8531:HG2_Ill_250bpfermikitraw_7138:HG2_Ill_150bpfermikitraw_6662:HG4_Ill_svaba_6665:HG4_Ill_Krunchall_7596:HG4_Ill_GATKHC_8606:HG4_Ill_GATKHCSBGrefine_3625;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6662:HG2_Ill_250bpfermikitraw_7138:HG2_Ill_GATKHC_8531:HG2_Ill_scalpel_5026:HG4_Ill_250bpfermikitraw_7189:HG4_Ill_FB_4754:HG4_Ill_GATKHCSBGrefine_3626:HG4_Ill_GATKHC_8607:HG4_Ill_scalpel_4941;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0934579;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.198198;PBcalls=4;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=108786;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=4:164401504-164401542;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:30:./.:13:16:7:10:./.:0:0:0:0:0/1:10:22:./.:.:.:.:.:.
chr4	164757746	HG2_Ill_MetaSV_3771	T	TAAAAGATGCCTCCTAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGAAGGCGGAGCTTGCAGTGAGCGGAGATCGCGCCACAGCACTCCAGCCTGGGCGACAAAACGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_9554:HG2_PB_pbsv_5067:HG4_PB_pbsv_5102:HG3_PB_pbsv_4932:HG4_Ill_MetaSV_3942:HG2_PB_assemblyticsfalcon_20343:HG2_PB_assemblyticsPBcR_19684:HG3_PB_HySA_7840:HG4_PB_SVrefine2Falcon1Dovetail_3093:HG2_PB_SVrefine2Falcon2Bionano_2457:HG2_PB_SVrefine2Falcon1plusDovetail_9081:HG2_PB_SVrefine2PBcRplusDovetail_8448:HG2_PB_SVrefine2PB10Xhap12_3681:HG3_PB_SVrefine2PBcRDovetail_2319:HG3_Ill_GATKHCSBGrefine_3455:HG2_Ill_MetaSV_3771:HG4_PB_SVrefine2PBcRDovetail_2583:HG4_Ill_GATKHCSBGrefine_3630:HG2_10X_SVrefine210Xhap12_3722:HG2_PB_PB10Xdip_21664;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_MetaSV_3771:HG3_Ill_GATKHCSBGrefine_3455:HG3_PB_SVrefine2PBcRDovetail_2319;NumExactMatchSVs=3;ClusterMaxShiftDist=0.161074;ClusterMaxSizeDiff=0.161074;ClusterMaxEditDist=0.274678;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=226;DistBack=19265;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:164757747-164757761;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:82:1/1:1:37:0:32:./.:0:0:0:0:1/1:0:10:./.:.:.:.:.:.
chr4	165455438	HG4_Ill_250bpfermikitraw_7202	A	ACCCAGCTTCTTTCCTTTTCAATAAACTAAGCCTTCTCTTTCTAACCAATGTGAATATTTTTGCTATTTAGATGTTTAGCTCTG	20	PASS	ClusterIDs=HG4_PB_pbsv_5107:HG2_PB_PB10Xdip_21667:HG3_PB_pbsv_4936:HG2_PB_pbsv_5071:HG2_Ill_breakscan11_3504:HG2_PB_HySA_9565:HG4_Ill_svaba_6675:HG4_Ill_manta_1282:HG4_Ill_Krunchall_7610:HG4_Ill_GATKHCSBGrefine_3635:HG4_Ill_Cortex_2794:HG4_Ill_250bpfermikitraw_7202:HG4_Ill_150bpfermikitraw_6899:HG3_PB_assemblyticsfalcon_20274:HG3_Ill_svaba_6664:HG3_Ill_manta_1191:HG3_Ill_Spiral_5637:HG3_Ill_Krunchall_7198:HG3_Ill_GATKHC_8558:HG3_Ill_GATKHCSBGrefine_3458:HG3_Ill_Cortex_2801:HG3_Ill_250bpfermikitraw_6922:HG3_Ill_150bpfermikitraw_6752:HG2_Ill_svaba_6544:HG2_Ill_manta_1452:HG2_Ill_SpiralSDKrefine_12925:HG2_Ill_Krunchall_7324:HG2_Ill_GATKHC_8546:HG2_Ill_GATKHCSBGrefine_3478:HG2_Ill_Cortex_6650:HG2_Ill_250bpfermikitraw_7148:HG2_Ill_150bpfermikitraw_6673;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6673:HG2_Ill_250bpfermikitraw_7148:HG2_Ill_Cortex_6650:HG2_Ill_GATKHCSBGrefine_3478:HG2_Ill_GATKHC_8546:HG2_Ill_Krunchall_7324:HG2_Ill_SpiralSDKrefine_12925:HG2_Ill_manta_1452:HG2_Ill_svaba_6544:HG3_Ill_150bpfermikitraw_6752:HG3_Ill_250bpfermikitraw_6922:HG3_Ill_Cortex_2801:HG3_Ill_GATKHCSBGrefine_3458:HG3_Ill_GATKHC_8558:HG3_Ill_Krunchall_7198:HG3_Ill_Spiral_5637:HG3_Ill_manta_1191:HG3_Ill_svaba_6664:HG3_PB_assemblyticsfalcon_20274:HG4_Ill_150bpfermikitraw_6899:HG4_Ill_250bpfermikitraw_7202:HG4_Ill_Cortex_2794:HG4_Ill_GATKHCSBGrefine_3635:HG4_Ill_Krunchall_7610:HG4_Ill_manta_1282:HG4_Ill_svaba_6675;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0809249;ClusterMaxSizeDiff=0.0809249;ClusterMaxEditDist=0.229885;PBcalls=6;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=83;DistBack=0;DistForward=10376;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:165455437-165455439;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:56:./.:7:17:2:18:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr4	166037482	HG4_Ill_MetaSV_3945	T	TTATGCAAGTAGTTCAGCATTTTTTTTTTTCTTTTGAGACTCAGTCTTGCTTTGTGGTCCAGGCTGGAGTGCAGTGGCATGGTCTCAGCTCACTGCTACCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTGGAGTAGCTGGGATTACAGGCACCCGCCACCACACCTGGCTAATTTTTGTATTTTTAGTAAAGGCGACGTTCCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCTGCCCACCTCTACTTTCAAAAGTGCTGGGATTACAGGCATGAGCCACCACTCCTGGCCAGCAATTTTTTTCTTCTGCAGTTTGAAAATTTTCAAAATAAAGTCAAAAGGGAAAAGATAGGCTAAAGAGCTTGCTTACACTTTAGGGTAGGAATAATCTGTGATTGCCTGGTATAAGCCAGAAGAAAGAAATGGTATCAGGAAATAGAATTCTGAACTTTACAAGGTTTAATAGAAGGAGATTGGTGGAGCTGGAGAGTGAGGTTGTCAGACGGAGAGGTGCAATTCAGTAGGAGACCTTGACCACTGGGAAAAATGATGAGTGGGAGAAAAGGATGTTCTCTGAAAAATCATGGGTGACTCTACAGAAGGAAGAAGGGGAACAAGATCCACTTTGTCTCACCATTTGGTTTAGACCTTGTCTTGCAAGAATAGGTGCTATTTCATGTTTAGTGTGTTCAGGTGAAAAGTTAAAGGAAAGTATATAATTGCCACTAAAAGTCATCCATATTCTTTCTCAGGGAATATATGCAGAAACAATGGGTTAGGTGCAGGAATAGGATTCTGTGGAACTCTGTCCAAAATGTACCCCTCCTCGCAATATATTTGTTTAGTACTTCAGGCATAGATAATATACAGGAATTAAAACTTAGTCCACACAGGGAAATAGTATTTAAA	20	PASS	ClusterIDs=HG3_PB_HySA_7856:HG2_PB_HySA_9571:HG2_PB_pbsv_5075:HG2_PB_assemblyticsPBcR_19698:HG4_PB_pbsv_5112:HG2_PB_HySA_9570:HG4_Ill_SVrefine2DISCOVARDovetail_3895:HG4_Ill_MetaSV_3945:HG4_Ill_GATKHCSBGrefine_3639:HG2_Ill_SVrefine2DISCOVARplusDovetail_9909:HG2_Ill_GATKHCSBGrefine_3481:HG2_10X_SVrefine210Xhap12_3730:HG4_PB_SVrefine2PBcRDovetail_2589:HG2_Ill_MetaSV_3774:HG2_PB_SVrefine2Falcon1plusDovetail_9086:HG2_PB_SVrefine2PBcRplusDovetail_8454:HG4_Ill_Spiral_423:HG2_Ill_Spiral_373:HG3_PB_pbsv_4940:HG3_PB_SVrefine2Falcon1Dovetail_3139:HG3_Ill_SVrefine2DISCOVARDovetail_3943:HG3_Ill_Spiral_5645:HG3_Ill_MetaSV_3948:HG3_PB_SVrefine2PBcRDovetail_2325:HG4_PB_SVrefine2Falcon1Dovetail_3099;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3730:HG2_Ill_GATKHCSBGrefine_3481:HG2_Ill_SVrefine2DISCOVARplusDovetail_9909:HG4_Ill_GATKHCSBGrefine_3639:HG4_Ill_MetaSV_3945:HG4_Ill_SVrefine2DISCOVARDovetail_3895;NumExactMatchSVs=6;ClusterMaxShiftDist=0.124072;ClusterMaxSizeDiff=0.124072;ClusterMaxEditDist=0.273834;PBcalls=13;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=934;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:166037483-166037483;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:33:0|1:35:1:0:26:./.:0:0:0:0:0/1:25:7:0/1:40:68:.:.:.
chr4	166303245	HG2_PB_SVrefine2Falcon2Bionano_2461	A	AAAAAGACAGTAGGGTCAGCAGGTCAGGGAGACTGGATTATTGAAGAATTGATGAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2461:HG4_PB_pbsv_5113:HG2_PB_PB10Xdip_21671:HG4_Ill_250bpfermikitraw_7210:HG2_Ill_250bpfermikitraw_7152:HG2_PB_HySA_9576:HG4_Ill_SVrefine2DISCOVARDovetail_3897;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2461:HG4_Ill_SVrefine2DISCOVARDovetail_3897;NumExactMatchSVs=2;ClusterMaxShiftDist=0.108108;ClusterMaxSizeDiff=0.0900901;ClusterMaxEditDist=0.18018;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=55;DistBack=24184;DistForward=26;DistMin=26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=172;REFWIDENED=4:166303246-166303417;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.9818;PctRecOverlap=0.8;SizeDiff=1;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=92;MatchId=4200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:42:0|1:33:3:10:38:./.:0:0:0:0:0/1:29:8:./.:.:.:.:.:.
chr4	166987134	HG2_Ill_MetaSV_3775	T	TTACCATTTGACATAGGTTTAGTAATATTTTACTTAAAATTAGGATATTAAATAATAGGGACCCTGATGAAATGTTGCCTCCAAACAATTAGATCTTATATAAAATTTAGTCAAATATTATAAAGGCTTG	20	PASS	ClusterIDs=HG3_PB_pbsv_4943:HG3_PB_SVrefine2PBcRDovetail_2329:HG2_PB_pbsv_5079:HG3_Ill_manta_1193:HG3_Ill_Spiral_5648:HG3_Ill_SVrefine2DISCOVARDovetail_3947:HG3_PB_SVrefine2Falcon1Dovetail_3142:HG3_Ill_MetaSV_3949:HG3_Ill_GATKHCSBGrefine_3465:HG2_PB_SVrefine2Falcon1plusDovetail_9089:HG2_Ill_manta_1454:HG2_Ill_SpiralSDKrefine_12931:HG2_Ill_MetaSV_3775:HG2_Ill_GATKHCSBGrefine_3483:HG2_10X_SVrefine210Xhap12_3731:HG2_PB_HySA_9583;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3731:HG2_Ill_GATKHCSBGrefine_3483:HG2_Ill_MetaSV_3775:HG2_Ill_SpiralSDKrefine_12931:HG2_Ill_manta_1454:HG2_PB_SVrefine2Falcon1plusDovetail_9089:HG3_Ill_GATKHCSBGrefine_3465:HG3_Ill_MetaSV_3949:HG3_PB_SVrefine2Falcon1Dovetail_3142;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0669145;ClusterMaxSizeDiff=0.0669145;ClusterMaxEditDist=0.208178;PBcalls=6;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=129;DistBack=13016;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=4:166987135-166987137;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4202.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:35:0|1:33:2:0:33:./.:0:0:0:0:0/1:42:17:./.:.:.:.:.:.
chr4	167338783	HG2_PB_SVrefine2Falcon1plusDovetail_9092	T	TTCTACTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_5083:HG2_PB_HySA_9592:HG3_PB_pbsv_4946:HG2_PB_SVrefine2Falcon1plusDovetail_9092:HG2_Ill_breakscan11_3506;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9092;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0911765;ClusterMaxSizeDiff=0.0823529;ClusterMaxEditDist=0.215743;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=41365;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=4:167338784-167338794;PctSeqSimilarity=0.9909;PctSizeSimilarity=0.9819;PctRecOverlap=0.9819;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4203.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:32:0|1:50:1:2:28:./.:0:0:0:0:0/1:19:10:0/1:8:29:.:.:.
chr4	168030072	HG2_PB_SVrefine2PBcRplusDovetail_8460	C	CAAATATATATATTTTATATTTATATTATAAATATTATATATATAAATATATAAATATTATAAATATATATATTATATATATATATAAATATATACTTATATAAAATATATATAAATATATACTTATATAAAAATATATATAAATATATACTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAAAAATATATATAAATATATATTTATATAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9095:HG2_PB_PB10Xdip_21676:HG4_PB_pbsv_5124:HG3_PB_SVrefine2Falcon1Dovetail_3146:HG2_PB_SVrefine2PB10Xhap12_3695:HG2_PB_pbsv_5086:HG2_PB_SVrefine2Falcon2Bionano_2467:HG4_PB_SVrefine2PBcRDovetail_2596:HG4_PB_SVrefine2Falcon1Dovetail_3105:HG2_PB_SVrefine2PBcRplusDovetail_8460:HG3_PB_pbsv_4950;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_8460;NumExactMatchSVs=1;ClusterMaxShiftDist=0.379058;ClusterMaxSizeDiff=0.379058;ClusterMaxEditDist=0.396226;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=466;DistBack=62491;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=675;REFWIDENED=4:168030073-168030747;PctSeqSimilarity=0.9612;PctSizeSimilarity=0.9246;PctRecOverlap=0.7248;SizeDiff=-38;StartDistance=-120;EndDistance=-120;GTMatch=1;TruScore=87;MatchId=4205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:1/1:2:35:0:6:./.:0:0:0:0:0/1:11:8:0/1:6:11:.:.:.
chr4	169034414	HG2_Ill_SVrefine2DISCOVARplusDovetail_9922	C	CTCTCACTTGGTCTGGTGAGGGCCCAGTCTCTGCTTTCATCTCACTTGGTCTGGTGAGAGCCCAGTCTCTGCTTTCA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9922:HG2_PB_pbsv_5096:HG2_PB_SVrefine2Falcon2Bionano_2471:HG4_PB_pbsv_5131;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9922:HG2_PB_SVrefine2Falcon2Bionano_2471;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0880503;ClusterMaxSizeDiff=0.0628931;ClusterMaxEditDist=0.289308;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=76;DistBack=-1;DistForward=14553;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=219;REFWIDENED=4:169034415-169034633;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:37:0|1:21:3:2:30:./.:0:0:0:0:0/1:14:4:./.:.:.:.:.:.
chr4	169659579	HG2_PB_SVrefine2PBcRplusDovetail_8464	A	ATTTTTTATTTTTATTTTTTTGAGATGTAATCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGAGATCTTGACTCACTGCAACCTCCGTCTCCCAGGTTCAAGCAATTCTCCTGCCTCCGCCTCCCAAATAGCTGGGATTATAGGCGTGTACTACCATGCCCGGCTAAGTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGCCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAATGCTGGGATTACAGGTGTGAGCCACCGTGCCCAACCAGTGTTCTCTCTACTTTTCTTTTCTTACTGCTACCACCCTGTTGTAGGCCTGGACATCTCACTTCTAAGTGCTCCACAACATCTAAACTGATCTTTCTCCCTTCAGTGTCTCCCCATGTTAATCCTTCTTAAACTCTTTTTTTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3111:HG4_PB_HySA_7661:HG4_PB_pbsv_5133:HG3_PB_pbsv_4960:HG2_PB_PB10Xdip_21683:HG3_PB_HySA_7898:HG4_Ill_MetaSV_3952:HG3_Ill_MetaSV_3954:HG2_Ill_GATKHCSBGrefine_3503:HG2_PB_pbsv_5097:HG2_PB_SVrefine2Falcon1plusDovetail_9100:HG2_PB_SVrefine2Falcon2Bionano_2472:HG2_10X_SVrefine210Xhap12_3739:HG4_Ill_SVrefine2DISCOVARDovetail_3911:HG3_Ill_SVrefine2DISCOVARDovetail_3966:HG2_PB_SVrefine2PBcRplusDovetail_8464:HG2_PB_SVrefine2PB10Xhap12_3700:HG2_Ill_SVrefine2DISCOVARplusDovetail_9925:HG3_PB_SVrefine2PBcRDovetail_2337;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9925:HG2_PB_SVrefine2PB10Xhap12_3700:HG2_PB_SVrefine2PBcRplusDovetail_8464:HG3_Ill_SVrefine2DISCOVARDovetail_3966:HG4_Ill_SVrefine2DISCOVARDovetail_3911;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0733333;ClusterMaxSizeDiff=0.0620843;ClusterMaxEditDist=0.218994;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=446;DistBack=28794;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=305;REFWIDENED=4:169659580-169659884;PctSeqSimilarity=0.9672;PctSizeSimilarity=0.9955;PctRecOverlap=0.4677;SizeDiff=-2;StartDistance=-238;EndDistance=-238;GTMatch=0;TruScore=81;MatchId=4209.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:73:1/1:2:20:0:12:./.:0:0:0:0:1/1:0:22:1/1:2:42:.:.:.
chr4	169756802	HG2_PB_pbsv_5099	G	GGGAGATTAGGGATCGGGGGCCGGTGCGCTGGTTGGCTCACGCCTTAATCCCAGCACTTGGTACGAGGCCGAGTGGCGGATCATGAGGGTCAGGAGATCAGACCATCCGGCCTAAACGGTTGAAACCCCTCTCTACAAAATACAAAAAAAAAAAAAAAAAAAAAAACAAAAAA	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_3967:HG3_PB_pbsv_4963:HG3_PB_HySA_7902:HG2_PB_pbsv_5099:HG3_PB_SVrefine2PBcRDovetail_2339;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_5099;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0635838;ClusterMaxSizeDiff=0.0578035;ClusterMaxEditDist=0.222222;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=172;DistBack=21764;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=4:169756803-169756802;PctSeqSimilarity=0.9255;PctSizeSimilarity=0.9709;PctRecOverlap=0.9595;SizeDiff=5;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=95;MatchId=4210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:24:./.:16:9:8:12:./.:0:0:0:0:0/1:31:8:./.:.:.:.:.:.
chr4	169989126	HG2_PB_SVrefine2Falcon2Bionano_2474	C	CAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGGGCCACGGCACTCCAGCCTGGGCGACAGAGTAAGACTCCGTCTCAAAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3740:HG4_PB_assemblyticsfalcon_19933:HG2_PB_pbsv_5100:HG2_PB_HySA_9629:HG2_PB_PB10Xdip_21686:HG4_PB_SVrefine2PBcRDovetail_2601:HG4_Ill_SVrefine2DISCOVARDovetail_3913:HG4_Ill_MetaSV_3953:HG4_PB_SVrefine2Falcon1Dovetail_3113:HG4_Ill_GATKHC_8675:HG4_Ill_GATKHCSBGrefine_3664:HG3_Ill_MetaSV_3955:HG3_Ill_GATKHCSBGrefine_3480:HG2_Ill_GATKHC_8603:HG2_Ill_GATKHCSBGrefine_3505:HG2_Ill_150bpfermikitraw_6721:HG4_PB_HySA_7666:HG4_PB_pbsv_5136:HG3_PB_HySA_7906:HG3_PB_SVrefine2PBcRDovetail_2340:HG3_PB_SVrefine2Falcon1Dovetail_3150:HG3_Ill_SVrefine2DISCOVARDovetail_3969:HG2_PB_SVrefine2PBcRplusDovetail_8466:HG2_PB_SVrefine2PB10Xhap12_3702:HG2_PB_SVrefine2Falcon2Bionano_2474:HG2_PB_SVrefine2Falcon1plusDovetail_9102:HG2_Ill_SVrefine2DISCOVARplusDovetail_9928;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3740:HG3_PB_SVrefine2PBcRDovetail_2340:HG3_PB_SVrefine2Falcon1Dovetail_3150:HG3_Ill_SVrefine2DISCOVARDovetail_3969:HG2_PB_SVrefine2PBcRplusDovetail_8466:HG2_PB_SVrefine2PB10Xhap12_3702:HG2_PB_SVrefine2Falcon2Bionano_2474:HG2_PB_SVrefine2Falcon1plusDovetail_9102:HG2_Ill_SVrefine2DISCOVARplusDovetail_9928;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0595238;ClusterMaxEditDist=0.227405;PBcalls=15;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=163;DistBack=36372;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=168;REFWIDENED=4:169989127-169989294;PctSeqSimilarity=0.9871;PctSizeSimilarity=1;PctRecOverlap=0.5767;SizeDiff=0;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=85;MatchId=4211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:46:1/1:0:18:0:24:./.:0:0:0:0:1/1:0:21:./.:.:.:.:.:.
chr4	170416346	HG3_PB_HySA_7911	G	GTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGCGGAGTCTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGGATCTCGGCTCACTGCAAGCTCCGCCTCCGGTTCACGCCATCTCCTGCCTCAGCTCCCAATGTAGCTGGGACTACAGGCCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTGCCGGGATGGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCGCCGCCTAGGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9105:HG4_PB_assemblyticsfalcon_19938:HG2_PB_HySA_9633:HG2_PB_pbsv_5103:HG3_PB_HySA_7911:HG3_PB_pbsv_4967:HG3_PB_SVrefine2Falcon1Dovetail_3152;NumClusterSVs=7;ExactMatchIDs=HG3_PB_HySA_7911;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0673499;ClusterMaxSizeDiff=0.0556369;ClusterMaxEditDist=0.198561;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=333;DistBack=-344;DistForward=1;DistMin=-344;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=344;REFWIDENED=4:170416340-170416683;PctSeqSimilarity=0.9694;PctSizeSimilarity=0.9852;PctRecOverlap=0.9705;SizeDiff=-5;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=97;MatchId=4212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:26:0|1:21:0:0:24:./.:0:0:0:0:./.:15:1:0/1:8:12:.:.:.
chr4	170834591	HG4_Ill_GATKHCSBGrefine_3669	A	ATTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAT	20	PASS	ClusterIDs=HG3_PB_pbsv_4970:HG2_PB_PB10Xdip_21689:HG2_Ill_breakscan11_3507:HG2_PB_HySA_9638:HG4_Ill_MetaSV_3958:HG4_Ill_GATKHCSBGrefine_3669:HG3_Ill_MetaSV_3958:HG3_Ill_GATKHCSBGrefine_3485:HG2_Ill_manta_1462:HG2_Ill_MetaSV_3782:HG2_Ill_GATKHCSBGrefine_3509:HG3_Ill_manta_1202:HG3_PB_HySA_7916:HG4_PB_HySA_7676:HG4_PB_assemblyticsfalcon_19943:HG2_PB_assemblyticsPBcR_19752:HG2_PB_pbsv_5107:HG4_PB_pbsv_5144:HG4_PB_SVrefine2PBcRDovetail_2606:HG4_PB_SVrefine2Falcon1Dovetail_3118:HG3_PB_SVrefine2PBcRDovetail_2345:HG2_PB_SVrefine2PBcRplusDovetail_8470:HG2_PB_SVrefine2PB10Xhap12_3708:HG2_PB_SVrefine2Falcon2Bionano_2479:HG2_10X_SVrefine210Xhap12_3749:HG3_PB_SVrefine2Falcon1Dovetail_3155:HG2_PB_SVrefine2Falcon1plusDovetail_9108;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3509:HG2_Ill_MetaSV_3782:HG2_Ill_manta_1462:HG3_Ill_GATKHCSBGrefine_3485:HG3_Ill_MetaSV_3958:HG4_Ill_GATKHCSBGrefine_3669:HG4_Ill_MetaSV_3958;NumExactMatchSVs=7;ClusterMaxShiftDist=0.137255;ClusterMaxSizeDiff=0.137255;ClusterMaxEditDist=0.187898;PBcalls=17;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=300;DistBack=-5;DistForward=4405;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=4:170834587-170834597;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4213.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:90:1/1:2:39:0:25:./.:0:0:0:0:1/1:0:28:1/1:1:71:.:.:.
chr4	171428784	HG2_Ill_MetaSV_3783	A	AGGAATGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAGAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_2347:HG3_Ill_MetaSV_3959:HG3_PB_pbsv_4973:HG2_PB_pbsv_5110:HG2_PB_HySA_9646:HG3_Ill_GATKHCSBGrefine_3488:HG2_Ill_MetaSV_3783:HG2_Ill_GATKHCSBGrefine_3512:HG2_PB_HySA_9645;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3512:HG2_Ill_MetaSV_3783:HG3_Ill_GATKHCSBGrefine_3488:HG3_Ill_MetaSV_3959;NumExactMatchSVs=4;ClusterMaxShiftDist=0.242833;ClusterMaxSizeDiff=0.23946;ClusterMaxEditDist=0.271647;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=2;DistForward=7;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=4:171428781-171428792;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:34:0|1:31:2:1:30:./.:0:0:0:0:0/1:22:12:1/1:3:46:.:.:.
chr4	172121737	HG4_Ill_250bpfermikitraw_7275	C	CATATATATATATATATATATATATATATATATATATATATATATGCCATATATATATGCCATATATATATATATATATGGCAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9936:HG2_PB_pbsv_5112:HG2_PB_HySA_9652:HG4_PB_HySA_7685:HG4_PB_pbsv_5149:HG4_Ill_manta_1295:HG4_Ill_GATKHC_8689:HG4_Ill_GATKHCSBGrefine_3673:HG4_Ill_250bpfermikitraw_7275:HG4_Ill_150bpfermikitraw_6962:HG2_Ill_SpiralSDKrefine_12965:HG2_Ill_GATKHC_8621:HG2_Ill_GATKHCSBGrefine_3514:HG2_Ill_150bpfermikitraw_6739:HG2_Ill_breakscan11_3508:HG2_PB_SVrefine2Falcon2Bionano_2481;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6739:HG2_Ill_GATKHCSBGrefine_3514:HG2_Ill_GATKHC_8621:HG2_Ill_SpiralSDKrefine_12965:HG4_Ill_150bpfermikitraw_6962:HG4_Ill_250bpfermikitraw_7275:HG4_Ill_GATKHCSBGrefine_3673:HG4_Ill_GATKHC_8689:HG4_Ill_manta_1295;NumExactMatchSVs=9;ClusterMaxShiftDist=0.121951;ClusterMaxSizeDiff=0.121951;ClusterMaxEditDist=0.209877;PBcalls=5;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=83;DistBack=5;DistForward=10895;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=4:172121730-172121764;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4215.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:22:./.:36:8:12:14:./.:0:0:0:0:0/1:19:6:./.:.:.:.:.:.
chr4	172288841	HG2_PB_SVrefine2Falcon1plusDovetail_9111	A	AAACAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_7687:HG2_PB_pbsv_5114:HG3_PB_pbsv_4976:HG3_PB_HySA_7930:HG4_PB_pbsv_5151:HG2_Ill_breakscan11_3509:HG2_PB_SVrefine2Falcon1plusDovetail_9111:HG4_Ill_MetaSV_3961:HG3_Ill_MetaSV_3960:HG3_PB_SVrefine2Falcon1Dovetail_3157:HG4_PB_SVrefine2PBcRDovetail_2608:HG3_PB_SVrefine2PBcRDovetail_2349:HG2_PB_HySA_9656:HG4_PB_SVrefine2Falcon1Dovetail_3121;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9111;NumExactMatchSVs=1;ClusterMaxShiftDist=0.127451;ClusterMaxSizeDiff=0.124183;ClusterMaxEditDist=0.214953;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=15524;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=4:172288842-172288851;PctSeqSimilarity=0.9937;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:57:0|1:33:1:0:39:./.:0:0:0:0:0/1:29:6:0/1:6:29:.:.:.
chr4	174044214	HG2_Ill_SVrefine2DISCOVARplusDovetail_9944	T	TTATTACTGCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGCGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTAGGACTACAGGCGCCCACCATCACGCCCGGCTAATTTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3510:HG2_PB_PB10Xdip_21698:HG2_PB_pbsv_5123:HG4_PB_HySA_7704:HG3_PB_pbsv_4987:HG4_PB_pbsv_5161:HG2_PB_assemblyticsPBcR_19779:HG3_PB_assemblyticsfalcon_20372:HG3_PB_SVrefine2Falcon1Dovetail_3165:HG2_PB_SVrefine2PBcRplusDovetail_8476:HG2_PB_SVrefine2PB10Xhap12_3714:HG2_PB_SVrefine2Falcon2Bionano_2486:HG2_PB_SVrefine2Falcon1plusDovetail_9115:HG2_Ill_SVrefine2DISCOVARplusDovetail_9944:HG2_10X_SVrefine210Xhap12_3763:HG3_PB_SVrefine2PBcRDovetail_2355:HG4_PB_SVrefine2PBcRDovetail_2615:HG3_PB_HySA_7945:HG2_PB_HySA_9676;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3763:HG2_Ill_SVrefine2DISCOVARplusDovetail_9944:HG2_PB_SVrefine2Falcon1plusDovetail_9115:HG2_PB_SVrefine2Falcon2Bionano_2486:HG2_PB_SVrefine2PB10Xhap12_3714:HG2_PB_SVrefine2PBcRplusDovetail_8476;NumExactMatchSVs=6;ClusterMaxShiftDist=0.197044;ClusterMaxSizeDiff=0.187192;ClusterMaxEditDist=0.275862;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=321;DistBack=1947;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=4:174044215-174044228;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4217.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:79:./.:0:2:0:3:./.:0:0:0:0:1/1:0:26:1/1:1:71:.:.:.
chr4	174149440	HG2_PB_SVrefine2Falcon1plusDovetail_9116	T	TCTTCTAGTCATTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_7706:HG3_PB_HySA_7946:HG2_PB_HySA_9677:HG2_PB_pbsv_5124:HG4_PB_pbsv_5162:HG3_PB_assemblyticsfalcon_20373:HG3_PB_pbsv_4988:HG4_PB_SVrefine2Falcon1Dovetail_3126:HG4_PB_SVrefine2PBcRDovetail_2616:HG2_PB_SVrefine2Falcon1plusDovetail_9116:HG3_PB_SVrefine2Falcon1Dovetail_3166:HG4_Ill_SVrefine2DISCOVARDovetail_3929:HG4_Ill_GATKHCSBGrefine_3686;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9116:HG4_PB_SVrefine2PBcRDovetail_2616;NumExactMatchSVs=2;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.208333;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:174149441-174149455;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:51:1|0:4:22:31:7:./.:0:0:0:0:0/1:28:11:0/1:8:32:.:.:.
chr4	174320678	HG2_PB_SVrefine2Falcon2Bionano_2487	A	AAGAGGAAAGTGGGGAATGGCTAGCTGCGCACCTCTTCCCCTTTCACAGTTTTCCTAGCCATCTAGATCTGTTACAAAATCCTGGTAGAAGATACGTTCCAATTCACCTTCCATTTCTCACCCAAAGACTCATTAGTAGTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3764:HG3_PB_pbsv_4989:HG3_PB_HySA_7947:HG3_Ill_250bpfermikitraw_7017:HG2_PB_pbsv_5125:HG3_PB_SVrefine2PBcRDovetail_2356:HG3_Ill_SVrefine2DISCOVARDovetail_3999:HG2_PB_SVrefine2Falcon2Bionano_2487:HG2_Ill_SVrefine2DISCOVARplusDovetail_9946;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3764:HG3_PB_SVrefine2PBcRDovetail_2356:HG3_Ill_SVrefine2DISCOVARDovetail_3999:HG2_PB_SVrefine2Falcon2Bionano_2487:HG2_Ill_SVrefine2DISCOVARplusDovetail_9946;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0756014;ClusterMaxSizeDiff=0.0684932;ClusterMaxEditDist=0.27907;PBcalls=5;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=140;DistBack=2821;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=149;REFWIDENED=4:174320679-174320827;PctSeqSimilarity=0.9969;PctSizeSimilarity=1;PctRecOverlap=0.8652;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=95;MatchId=4219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:30:./.:10:20:27:4:./.:0:0:0:0:0/1:9:11:./.:.:.:.:.:.
chr4	175211579	HG4_Ill_GATKHCSBGrefine_3689	T	TAAATTTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCTGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3129:HG2_PB_SVrefine2Falcon1plusDovetail_9120:HG4_PB_pbsv_5167:HG2_PB_HySA_9694:HG2_PB_assemblyticsPBcR_19794:HG4_PB_SVrefine2PBcRDovetail_2619:HG2_PB_pbsv_5132:HG4_Ill_MetaSV_3966:HG4_Ill_GATKHCSBGrefine_3689:HG2_Ill_MetaSV_3788:HG2_Ill_GATKHCSBGrefine_3529:HG2_PB_SVrefine2PB10Xhap12_3720:HG2_PB_SVrefine2PBcRplusDovetail_8480:HG2_Ill_breakscan11_3511:HG4_PB_HySA_7714:HG2_PB_PB10Xdip_21710;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3529:HG2_Ill_MetaSV_3788:HG4_Ill_GATKHCSBGrefine_3689:HG4_Ill_MetaSV_3966:HG4_PB_SVrefine2PBcRDovetail_2619;NumExactMatchSVs=5;ClusterMaxShiftDist=0.234506;ClusterMaxSizeDiff=0.234506;ClusterMaxEditDist=0.343949;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=313;DistBack=-9;DistForward=0;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=4:175211580-175211588;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9937;PctRecOverlap=0.9937;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4220.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:./.:9:20:11:5:./.:0:0:0:0:0/1:11:9:0/1:17:30:.:.:.
chr4	175241665	HG2_Ill_SVrefine2DISCOVARplusDovetail_9953	A	AAGGATATAAAGAAGGTGAAGTAGAGGTAGTGTGAAACATTAAACTACAAAATTAAAGCTTTAATTGTTGTGTCTCTTGAGTTTTAATGTTCCTAGTGAAAATGACAGGTTTCTTATCCCACTCAGAGAAGAAAACTGGAAAGTCAGTACAGCACTGACAGCAGTAGCACATTCAGAACATGCAAATTTATTTTTGAAGAGGAAATTTTTAAAAATTCATATTAATTTTATTATGACTTATGTTTGTTCCTAATACTTGTGGGAATTAGGAGTATATATATATATGGTTTGGTTTTTTTTTTTTTTCTCAGTGAAGTCCACTAAATCACTAGTAAAAATTTAATTTGATTTTGCTTTTTAGTCATTTAAATGTAAAATATTAAACATAGGACTTATTCAGTAAGTATCCCAAATGTATAAATTATTTTAATTTTATGTTAGAGGGATGGGTGGTAAGAAGAAAAGTAGAGAATCACAGGAAAGTTGAACAGTCAGGGAATTAGAGTGATGAGAAGGCTGAATATTTTGGAATAGTTCCTAATTCGTTTCAGTCCTTTAGTTCACTTAAGTTGTTATGTACTTGGAGTGCAAATCAACTTATTAAATCATGAGATGTAGCTCTTAAATATTTGTTGTTGAAACCCTGAGAGGCACCTGGGACAATGCAACAGAATTCTGTACGTGTTTCTTATGTCTCTTGGCCGTCCCTATAGATTTACTTTTGCAGTTTCCCAGTAATGTTTGCCCCAGGCAGATCTCCTTTCCAGGCTCCCCATCAACAGTATTTCTGTGTTGGTTATCTTGTCTCTGAAACTTCTGAGCTTTTCGAAGACTGTATCTCTGTTAGGATATTTATGAAAAAAAGGTTTTAAAATAAGCTATGGAATAGTTATTTGTAATTACAGTTATAAAACTCTATTAGTTTGAATTATAGTAAAGATTGATCATTTTTAGACCCATGACTGGCTCACCTTTTTTTTTTTTTTTTTTCATTTTTCCCATTCCCCACTTTGATGAGAAAGCATTACCTTCTGTAAGTCCTCGTAAGGTGGAGGACGTTTGTTTGCATGCCCTTTGCTATTGTATGGGAGGCAAAACTTTACCATCTTAGGGTCTCTGGCTAGGCCTGAGAATTGAATTGACATAAGATAAATTAGCAGGAGACAAACGGATTTTCCCATGTACATGGGAGCCCCCATAGGAAAATGAACATCCAAAGAAGTGGCAAAACCTAAATGCTTGTATAGTAGGTTGAATGAAGAGCAGCAATTGTGGAAAAGTAACTAAAATGTATGAAGAGGCTAAAGAAAGGTAAGTTATTTTAACAGGGACTGTTTGTACGGGTTTTTCTCCACCTCCACTCATCTCTGGTAGCAAGAATGCCCTTGTACCAGGAGGGCATCTTTCACATGGAAGTTTTCTCCCTTCGGTGATACTTCTTTTTTCCTGGTGCCGGGAGGGCAGTGTCTCTTTTGCATCTGCTGATTTTCAAGTGCCTTTAGCTCAAAATAATCTTATGCCAAAATGGCATATTCTGCCACACTTCACTATCAAAAATAGTACATAGACTGTCACTCAAAGATTACTACTACTACTGCTACTACTACTACTGCTACTAGTCCATCCCCTGTCTAAGCCCTGTTATTTATACTGTACAATCCTTTATATTATTTCATACATTCCCATTACCACTGTATTCAAGGTTTCTCATTCTTTGCTTGCACTGTTCACTGATCTTGCCTCCTTGAGTATATCCACACCAATACGAAAGTGTATTTTTTTAAAAATTGATTATGACATGTTGCTGCTAAAAATGTATCTTTGTGTTTCTCCTATTACTAATGAGTAGAGCCCAGCTTTTTATGCTGGACAGCAAAGGCCTTTTTCTTTGAAGTCTTTATTTCCAGTGCCCGCTACAATTCTATAGAGAATATAAATACACAGAACTCTCTTAAAAGTGTGCTTTCAAACACCATTTCTTTTGTCTAGAATGACTTTTCCTTTCATCTGGCAAGTTTCTGCTTATCCTCAAAGACCGAATACCTTTCTCGGAAAAGCTTTTCTCAACTGTAGAGGCCAAATTATCAACTTCTGTCTCTTTGCTGCTTTAGTGCCCTTTTTATACTTTTGATTTTTATACCCACTTTATAGCTATTATTTATTTGTATGACTTTAATCCTCATTAGTCTTCCAGCTTTCAGTCTTTTTTCTAATGTTTGTTTCACCTACTGCCTACCATTTATTTATTCATTACAGACTAAATGGTACTAATAATTAGTTGTTGACTAAATGAACATCAAATACATTAGAATGAAGGTTTCCAGATAAGCAAGGTTTTATTAAGGTAAAGCTAGGGCCTGGTCAATCATACTATATTCTTTTCTATGGGAAATGTATTGACAGAAGGAAGATGTAATCATGAATTCTAGAAAAGAGTCAGCCAAAGATGAATACCTCATTGATAGATTAATAAATACATTTAGAATGAAAGTTGATTGAAGTGTCTACTAGTGCCAGGCACTGGATATAGGCAGAGCTAACGATATAGACATGGTTCCTGTTCTTACCGAGCTAACAGCTAAGCAGCAAAGACAGTTAAATACACAATAGCAATGTGTAGTACTGTGATAAGGCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3170:HG4_PB_pbsv_5168:HG2_PB_pbsv_5133:HG2_PB_PB10Xdip_21711:HG3_PB_pbsv_4997:HG2_Ill_breakscan11_3512:HG4_PB_HySA_7715:HG2_PB_SVrefine2PBcRplusDovetail_8481:HG2_PB_SVrefine2PB10Xhap12_3721:HG3_PB_SVrefine2PBcRDovetail_2362:HG4_PB_SVrefine2PBcRDovetail_2620:HG4_Ill_SVrefine2DISCOVARDovetail_3934:HG2_PB_SVrefine2Falcon1plusDovetail_9121:HG2_PB_SVrefine2Falcon2Bionano_2492:HG2_Ill_SVrefine2DISCOVARplusDovetail_9953:HG2_10X_SVrefine210Xhap12_3768:HG4_PB_SVrefine2Falcon1Dovetail_3130;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3768:HG2_Ill_SVrefine2DISCOVARplusDovetail_9953:HG2_PB_SVrefine2Falcon2Bionano_2492;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0605833;ClusterMaxSizeDiff=0.0605833;ClusterMaxEditDist=0.208843;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=2634;DistBack=28756;DistForward=21854;DistMin=21854;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=4:175241666-175241668;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9996;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:101:1/1:4:28:0:30:./.:0:0:0:0:1/1:0:47:1/1:8:268:.:2590:.
chr4	175534291	HG2_10X_SVrefine210Xhap12_3769	A	AAGGAGTTTCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTTTTTTTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3513:HG2_PB_pbsv_5135:HG3_PB_HySA_7962:HG3_PB_pbsv_5000:HG4_PB_pbsv_5170:HG2_PB_assemblyticsPBcR_19798:HG3_PB_assemblyticsfalcon_20386:HG2_PB_PB10Xdip_21712:HG4_PB_SVrefine2PBcRDovetail_2622:HG3_PB_SVrefine2PBcRDovetail_2363:HG4_PB_SVrefine2Falcon1Dovetail_3131:HG2_Ill_MetaSV_3789:HG2_PB_SVrefine2PBcRplusDovetail_8483:HG2_Ill_SVrefine2DISCOVARplusDovetail_9956:HG3_PB_SVrefine2Falcon1Dovetail_3172:HG4_Ill_GATKHCSBGrefine_3691:HG3_Ill_MetaSV_3969:HG3_Ill_GATKHCSBGrefine_3502:HG2_PB_SVrefine2PB10Xhap12_3723:HG2_PB_SVrefine2Falcon1plusDovetail_9123:HG2_Ill_GATKHCSBGrefine_3531:HG2_10X_SVrefine210Xhap12_3769:HG2_PB_SVrefine2Falcon2Bionano_2494;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3769:HG2_Ill_GATKHCSBGrefine_3531:HG2_PB_SVrefine2Falcon1plusDovetail_9123:HG2_PB_SVrefine2PB10Xhap12_3723:HG3_Ill_GATKHCSBGrefine_3502:HG3_Ill_MetaSV_3969:HG4_Ill_GATKHCSBGrefine_3691;NumExactMatchSVs=7;ClusterMaxShiftDist=0.159509;ClusterMaxSizeDiff=0.159509;ClusterMaxEditDist=0.217707;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=329;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=4:175534292-175534305;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:22:0:12:./.:0:0:0:0:1/1:0:17:1/1:2:93:.:.:.
chr4	175970138	HG2_Ill_svaba_6634	G	GAGTATGGAGAATCCATGGCTTAACACCATCCAACTTGAAATGGAGCCTGTTGTTCATTCAAATTGGCTTCAGTTCAAGTTGGGTGGTGTTAAGCCATGGATTCTCCATACTCAGTAGT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3514:HG2_PB_pbsv_5136:HG4_PB_pbsv_5172:HG3_PB_pbsv_5002:HG3_PB_assemblyticsfalcon_20390:HG2_PB_assemblyticsPBcR_19801:HG2_PB_HySA_9699:HG4_PB_SVrefine2PBcRDovetail_2623:HG4_PB_SVrefine2Falcon1Dovetail_3133:HG4_Ill_svaba_6767:HG4_Ill_manta_1297:HG4_Ill_SVrefine2DISCOVARDovetail_3938:HG4_Ill_MetaSV_3968:HG4_Ill_GATKHCSBGrefine_3692:HG3_PB_SVrefine2PBcRDovetail_2364:HG3_PB_SVrefine2Falcon1Dovetail_3173:HG3_Ill_svaba_6767:HG3_Ill_manta_1207:HG3_Ill_Spiral_5731:HG3_Ill_SVrefine2DISCOVARDovetail_4010:HG3_Ill_MetaSV_3970:HG3_Ill_GATKHCSBGrefine_3503:HG2_PB_SVrefine2PBcRplusDovetail_8484:HG2_PB_SVrefine2PB10Xhap12_3724:HG2_PB_SVrefine2Falcon2Bionano_2495:HG2_PB_SVrefine2Falcon1plusDovetail_9124:HG2_Ill_svaba_6634:HG2_Ill_manta_1468:HG2_Ill_SpiralSDKrefine_12987:HG2_Ill_SVrefine2DISCOVARplusDovetail_9957:HG2_Ill_MetaSV_3790:HG2_Ill_GATKHCSBGrefine_3532:HG2_PB_PB10Xdip_21713;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3532:HG2_Ill_MetaSV_3790:HG2_Ill_SVrefine2DISCOVARplusDovetail_9957:HG2_Ill_SpiralSDKrefine_12987:HG2_Ill_manta_1468:HG2_Ill_svaba_6634:HG2_PB_SVrefine2Falcon1plusDovetail_9124:HG2_PB_SVrefine2Falcon2Bionano_2495:HG2_PB_SVrefine2PB10Xhap12_3724:HG2_PB_SVrefine2PBcRplusDovetail_8484:HG3_Ill_GATKHCSBGrefine_3503:HG3_Ill_MetaSV_3970:HG3_Ill_SVrefine2DISCOVARDovetail_4010:HG3_Ill_Spiral_5731:HG3_Ill_manta_1207:HG3_Ill_svaba_6767:HG3_PB_SVrefine2Falcon1Dovetail_3173:HG3_PB_SVrefine2PBcRDovetail_2364:HG4_Ill_GATKHCSBGrefine_3692:HG4_Ill_MetaSV_3968:HG4_Ill_SVrefine2DISCOVARDovetail_3938:HG4_Ill_manta_1297:HG4_Ill_svaba_6767:HG4_PB_SVrefine2Falcon1Dovetail_3133:HG4_PB_SVrefine2PBcRDovetail_2623;NumExactMatchSVs=25;ClusterMaxShiftDist=0.15;ClusterMaxSizeDiff=0.15;ClusterMaxEditDist=0.186441;PBcalls=15;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=118;DistBack=14018;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=4:175970139-175970144;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:88:1/1:1:42:1:44:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr4	176102161	HG3_Ill_GATKHC_8694	T	TTTCCTTCAATACCTAGTTTATTGAGAGTTTTTAACATGAAGGGATGTTGAATATTATCGTATG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9960:HG3_PB_HySA_7967:HG3_PB_assemblyticsfalcon_20394:HG3_PB_pbsv_5004:HG2_PB_HySA_9701:HG4_PB_HySA_7725:HG4_PB_pbsv_5175:HG4_Ill_Krunchall_7720:HG4_Ill_GATKHC_8736:HG4_Ill_GATKHCSBGrefine_3694:HG4_Ill_250bpfermikitraw_7314:HG4_Ill_150bpfermikitraw_7001:HG3_Ill_Krunchall_7321:HG3_Ill_GATKHC_8694:HG3_Ill_GATKHCSBGrefine_3505:HG3_Ill_250bpfermikitraw_7036:HG3_Ill_150bpfermikitraw_6872:HG2_Ill_Krunchall_7433:HG2_Ill_GATKHCSBGrefine_3534:HG2_Ill_250bpfermikitraw_7258:HG2_Ill_150bpfermikitraw_6777:HG2_PB_PB10Xdip_21714:HG2_10X_SVrefine210Xhap12_3773:HG4_PB_SVrefine2PBcRDovetail_2626:HG4_PB_SVrefine2Falcon1Dovetail_3135:HG4_Ill_SVrefine2DISCOVARDovetail_3941:HG3_PB_SVrefine2PBcRDovetail_2366:HG3_Ill_SVrefine2DISCOVARDovetail_4013:HG2_PB_SVrefine2PBcRplusDovetail_8487:HG2_PB_SVrefine2PB10Xhap12_3727:HG2_PB_SVrefine2Falcon2Bionano_2499;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6777:HG2_Ill_250bpfermikitraw_7258:HG2_Ill_GATKHCSBGrefine_3534:HG2_Ill_Krunchall_7433:HG3_Ill_150bpfermikitraw_6872:HG3_Ill_250bpfermikitraw_7036:HG3_Ill_GATKHCSBGrefine_3505:HG3_Ill_GATKHC_8694:HG3_Ill_Krunchall_7321:HG4_Ill_150bpfermikitraw_7001:HG4_Ill_250bpfermikitraw_7314:HG4_Ill_GATKHCSBGrefine_3694:HG4_Ill_GATKHC_8736:HG4_Ill_Krunchall_7720;NumExactMatchSVs=14;ClusterMaxShiftDist=0.160584;ClusterMaxSizeDiff=0.160584;ClusterMaxEditDist=0.314286;PBcalls=13;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=63;DistBack=-121;DistForward=60;DistMin=-121;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=126;REFWIDENED=4:176102157-176102282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4224.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:55:./.:2:6:0:18:./.:0:0:0:0:./.:3:37:./.:.:.:.:.:.
chr4	176120550	HG4_Ill_MetaSV_3969	T	TGCTATTATTGCCAGAAGCAACAGTCAAAACAACAGAAATGTGGATTCTGACTTATTTCTGCATTCCACATCATACAGGAGGGCATCTGATTGGTAGGATCTAATTTACATAAAAACTCTAGCAGTAATGTAGTATAGAAAATAGAATGCTTTTAGTCTCTGAAGTTTGGGAATCAATGCAAACTTAATAAATTGATCATATGTACAGTGATTAAGGCATAGTTATAAAGTGCTTGATATAGTACTATATTTATTTATAAAAATTATTATTCTCATTCATACTCATACCACATATCCATTATGTTGCTTGCTTCACTGTATTTTAGCAAATATGTGCTACCTTGAAAAAGAAATGTGGCATTATATTCTTTTAATACATTTTTTTAACTA	20	PASS	ClusterIDs=HG3_PB_pbsv_5005:HG2_PB_pbsv_5141:HG3_PB_assemblyticsfalcon_20395:HG2_PB_assemblyticsPBcR_19805:HG4_PB_pbsv_5176:HG4_PB_HySA_7726:HG2_PB_HySA_9702:HG2_PB_SVrefine2Falcon2Bionano_2500:HG4_PB_SVrefine2PBcRDovetail_2627:HG4_PB_SVrefine2Falcon1Dovetail_3136:HG4_Ill_MetaSV_3969:HG4_Ill_GATKHCSBGrefine_3695:HG3_PB_SVrefine2Falcon1Dovetail_3175:HG3_Ill_MetaSV_3971:HG2_PB_SVrefine2PBcRplusDovetail_8488:HG2_PB_SVrefine2PB10Xhap12_3728:HG2_PB_SVrefine2Falcon1plusDovetail_9126:HG2_10X_SVrefine210Xhap12_3774:HG3_PB_SVrefine2PBcRDovetail_2367:HG3_Ill_SVrefine2DISCOVARDovetail_4014:HG3_Ill_GATKHCSBGrefine_3506:HG2_Ill_MetaSV_3791:HG2_Ill_GATKHCSBGrefine_3535:HG2_PB_PB10Xdip_21715:HG2_Ill_breakscan11_3515;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3774:HG2_PB_SVrefine2Falcon1plusDovetail_9126:HG2_PB_SVrefine2PB10Xhap12_3728:HG2_PB_SVrefine2PBcRplusDovetail_8488:HG3_Ill_MetaSV_3971:HG3_PB_SVrefine2Falcon1Dovetail_3175:HG4_Ill_GATKHCSBGrefine_3695:HG4_Ill_MetaSV_3969:HG4_PB_SVrefine2Falcon1Dovetail_3136:HG4_PB_SVrefine2PBcRDovetail_2627;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0503145;ClusterMaxSizeDiff=0.0427673;ClusterMaxEditDist=0.167488;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=389;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=4:176120551-176120551;PctSeqSimilarity=0.9987;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:26:0:20:./.:0:0:0:0:1/1:0:30:./.:2:25:.:.:.
chr4	177172431	HG3_Ill_SVrefine2DISCOVARDovetail_4017	A	GCACAGAAAGTCAGGAGTCCCAGATGTGCCAGTCTCAACTCCAGTTTTACATGCCAAGGTGGCATCCTGTCCATGCTGGCAGGACAGCGGGTGTCCTGCAGATACTGTGCCTTTGTCCAACTATCTCCAAACAGGAGACCTCGCTCACTATGGGAGCTGCTTCCTTCTCTTTCCCTTGCTTTACAGTGACTGCAGGAAAATAGATTTCCCATCGCTGGAGACAGATCATCCCTCCCATCGGAATCTTCTAGCAGCCTATGTATGAATAAGCCAGTTGTGTGCATGCGCAAAAGTAAGATTTCTATTTCTTGTTTGTTTAATCATTCTTACCTTTGTTAACTAAAACAGATACAAAAGGATTTAGGACACAAGCATCAATGCAGAGTACCTGGAAGGGTGAAGATCTAAAGTCCAGAGTGGCTGTTTTTAGCAGGTACCGATTTTCAGTTTTATATCAACCGTAGCCCTTCCTGTGACACCATCTAACACTTGATAATTTTCAGGTCTGCTTGAGAGAAAAAAGCGAGTAATCTCCTTGTCAGTTATAGTTCCCATACCTGGTGTCTGTGATGTTTTCTCTTTGCCACACACACTTTGAAGTACCATATTGAGCATTCAATCTTAAATACACAAACAATGTTTAATAATGTTCC	20	PASS	ClusterIDs=HG3_PB_pbsv_5008:HG2_PB_HySA_9711:HG2_PB_SVrefine2PB10Xhap12_3732:HG2_PB_PB10Xdip_21719:HG2_PB_pbsv_5144:HG3_PB_SVrefine2PBcRDovetail_2370:HG3_Ill_SVrefine2DISCOVARDovetail_4017:HG2_PB_SVrefine2Falcon2Bionano_2503:HG3_PB_SVrefine2Falcon1Dovetail_3178:HG3_Ill_MetaSV_3973:HG2_PB_SVrefine2Falcon1plusDovetail_9129:HG2_10X_SVrefine210Xhap12_3776:HG3_PB_assemblyticsfalcon_20404:HG3_PB_HySA_7979;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2503:HG3_Ill_SVrefine2DISCOVARDovetail_4017:HG3_PB_SVrefine2PBcRDovetail_2370;NumExactMatchSVs=3;ClusterMaxShiftDist=0.177116;ClusterMaxSizeDiff=0.177116;ClusterMaxEditDist=0.258621;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=652;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=4:177172432-177172430;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9969;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:42:0|1:26:4:1:31:./.:0:0:0:0:0/1:21:3:0/1:12:37:.:.:.
chr4	177221409	HG2_Ill_manta_1472	A	ATCATCAGTTAAGGCAGGAACAGGCCATTTTCACTTCTTTTGTGGTGGAATG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_7271:HG3_PB_pbsv_5009:HG2_PB_pbsv_5145:HG4_PB_HySA_7748:HG2_PB_HySA_9712:HG4_Ill_svaba_6778:HG4_Ill_Krunchall_7730:HG4_Ill_GATKHC_8751:HG4_Ill_GATKHCSBGrefine_3698:HG4_Ill_250bpfermikitraw_7328:HG3_PB_assemblyticsfalcon_20405:HG3_Ill_svaba_6780:HG3_Ill_Spiral_5744:HG3_Ill_Krunchall_7333:HG3_Ill_GATKHC_8708:HG3_Ill_GATKHCSBGrefine_3509:HG3_Ill_250bpfermikitraw_7049:HG2_Ill_svaba_6647:HG2_Ill_manta_1472:HG2_Ill_Krunchall_7446:HG2_Ill_GATKHC_8678:HG2_Ill_GATKHCSBGrefine_3539;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7271:HG4_Ill_svaba_6778:HG4_Ill_Krunchall_7730:HG4_Ill_GATKHC_8751:HG4_Ill_GATKHCSBGrefine_3698:HG4_Ill_250bpfermikitraw_7328:HG3_PB_assemblyticsfalcon_20405:HG3_Ill_svaba_6780:HG3_Ill_Spiral_5744:HG3_Ill_Krunchall_7333:HG3_Ill_GATKHC_8708:HG3_Ill_GATKHCSBGrefine_3509:HG3_Ill_250bpfermikitraw_7049:HG2_Ill_svaba_6647:HG2_Ill_manta_1472:HG2_Ill_Krunchall_7446:HG2_Ill_GATKHC_8678:HG2_Ill_GATKHCSBGrefine_3539;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0925926;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.18018;PBcalls=5;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=0;DistForward=19;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=31;REFWIDENED=4:177221406-177221436;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:24:0|1:35:4:1:20:./.:0:0:0:0:0/1:27:24:./.:.:.:.:.:.
chr4	177288438	HG2_Ill_breakscan11_3516	T	TTTGAAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3516:HG2_PB_PB10Xdip_21720:HG2_PB_pbsv_5146:HG3_PB_assemblyticsfalcon_20406:HG3_PB_pbsv_5010:HG3_PB_HySA_7980:HG2_PB_HySA_9713:HG4_PB_SVrefine2PBcRDovetail_2630:HG3_PB_SVrefine2Falcon1Dovetail_3179:HG2_PB_SVrefine2Falcon1plusDovetail_9130:HG2_PB_SVrefine2PB10Xhap12_3733:HG4_PB_SVrefine2Falcon1Dovetail_3139:HG3_PB_SVrefine2PBcRDovetail_2371;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_breakscan11_3516:HG2_PB_PB10Xdip_21720;NumExactMatchSVs=2;ClusterMaxShiftDist=0.141141;ClusterMaxSizeDiff=0.138554;ClusterMaxEditDist=0.192635;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=336;DistBack=67008;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=4:177288439-177288446;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9941;PctRecOverlap=0.9941;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:46:0|1:24:1:2:37:./.:0:0:0:0:0/1:28:8:0/1:10:23:.:.:.
chr4	177444916	HG3_Ill_Krunchall_7335	C	CTATCTGATTATATTTATCAGAAAAAGGACGTTTGCAGCTTAATTTGAATTTTCTAT	20	PASS	ClusterIDs=HG2_PB_HySA_9715:HG4_PB_pbsv_5181:HG4_PB_HySA_7749:HG2_PB_pbsv_5147:HG2_PB_PB10Xdip_21721:HG3_PB_HySA_7981:HG3_PB_pbsv_5011:HG4_PB_SVrefine2PBcRDovetail_2631:HG4_Ill_svaba_6780:HG4_Ill_manta_1298:HG4_Ill_SVrefine2DISCOVARDovetail_3945:HG4_Ill_Krunchall_7732:HG4_Ill_GATKHC_8753:HG4_Ill_GATKHCSBGrefine_3699:HG4_Ill_250bpfermikitraw_7330:HG4_Ill_150bpfermikitraw_7016:HG3_Ill_svaba_6782:HG3_Ill_Krunchall_7335:HG3_Ill_GATKHC_8710:HG3_Ill_GATKHCSBGrefine_3510:HG3_Ill_250bpfermikitraw_7051:HG3_Ill_150bpfermikitraw_6886:HG2_PB_SVrefine2PBcRplusDovetail_8492:HG2_PB_SVrefine2PB10Xhap12_3734:HG2_PB_SVrefine2Falcon2Bionano_2504:HG2_PB_SVrefine2Falcon1plusDovetail_9131:HG2_Ill_svaba_6649:HG2_Ill_manta_1473:HG2_Ill_SVrefine2DISCOVARplusDovetail_9967:HG2_Ill_Krunchall_7448:HG2_Ill_GATKHC_8680:HG2_Ill_GATKHCSBGrefine_3540:HG2_Ill_250bpfermikitraw_7273:HG2_Ill_150bpfermikitraw_6790:HG2_10X_SVrefine210Xhap12_3778:HG4_PB_SVrefine2Falcon1Dovetail_3140:HG3_PB_SVrefine2PBcRDovetail_2372:HG3_PB_SVrefine2Falcon1Dovetail_3180;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3778:HG2_Ill_150bpfermikitraw_6790:HG2_Ill_250bpfermikitraw_7273:HG2_Ill_GATKHCSBGrefine_3540:HG2_Ill_GATKHC_8680:HG2_Ill_Krunchall_7448:HG2_Ill_SVrefine2DISCOVARplusDovetail_9967:HG2_Ill_manta_1473:HG2_Ill_svaba_6649:HG2_PB_SVrefine2Falcon1plusDovetail_9131:HG2_PB_SVrefine2Falcon2Bionano_2504:HG2_PB_SVrefine2PB10Xhap12_3734:HG2_PB_SVrefine2PBcRplusDovetail_8492:HG3_Ill_150bpfermikitraw_6886:HG3_Ill_250bpfermikitraw_7051:HG3_Ill_GATKHCSBGrefine_3510:HG3_Ill_GATKHC_8710:HG3_Ill_Krunchall_7335:HG3_Ill_svaba_6782:HG4_Ill_150bpfermikitraw_7016:HG4_Ill_250bpfermikitraw_7330:HG4_Ill_GATKHCSBGrefine_3699:HG4_Ill_GATKHC_8753:HG4_Ill_Krunchall_7732:HG4_Ill_SVrefine2DISCOVARDovetail_3945:HG4_Ill_manta_1298:HG4_Ill_svaba_6780:HG4_PB_SVrefine2PBcRDovetail_2631;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0854701;ClusterMaxEditDist=0.285714;PBcalls=15;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=56;DistBack=-54;DistForward=-1;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=4:177444917-177444972;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:69:./.:0:2:0:1:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr4	179198311	HG2_Ill_GATKHCSBGrefine_3555	T	TCATGGTCATCCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGAGTTTCACCATTTTAGCCGGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_8009:HG4_PB_pbsv_5195:HG3_PB_pbsv_5027:HG4_Ill_MetaSV_3976:HG2_PB_pbsv_5161:HG3_PB_SVrefine2PBcRDovetail_2383:HG3_Ill_MetaSV_3978:HG3_Ill_GATKHCSBGrefine_3523:HG2_Ill_GATKHCSBGrefine_3555:HG2_PB_SVrefine2Falcon1plusDovetail_9140:HG4_PB_HySA_7774;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3555:HG3_Ill_GATKHCSBGrefine_3523:HG3_Ill_MetaSV_3978:HG3_PB_SVrefine2PBcRDovetail_2383;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0484115;ClusterMaxSizeDiff=0.0306748;ClusterMaxEditDist=0.202723;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=321;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=4:179198312-179198329;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:43:0|1:32:0:1:35:./.:0:0:0:0:0/1:22:11:0/1:10:39:.:.:.
chr4	179444719	HG2_Ill_GATKHCSBGrefine_3556	T	TCTGATTCTCAATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGTGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCAGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTTACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_HySA_7775:HG4_PB_pbsv_5196:HG2_PB_pbsv_5162:HG2_PB_HySA_9748:HG2_PB_assemblyticsPBcR_19845:HG4_Ill_MetaSV_3977:HG4_Ill_GATKHCSBGrefine_3713:HG2_Ill_GATKHCSBGrefine_3556:HG2_Ill_MetaSV_3799:HG4_PB_SVrefine2Falcon1Dovetail_3151:HG2_PB_SVrefine2Falcon1plusDovetail_9141:HG2_PB_SVrefine2PBcRplusDovetail_8501;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3556:HG4_Ill_GATKHCSBGrefine_3713:HG4_Ill_MetaSV_3977;NumExactMatchSVs=3;ClusterMaxShiftDist=0.231511;ClusterMaxSizeDiff=0.231511;ClusterMaxEditDist=0.244373;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=0;DistForward=11;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=4:179444720-179444735;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4235.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:38:0|1:33:1:1:30:./.:0:0:0:0:0/1:30:9:0/1:5:34:.:.:.
chr4	180256954	HG2_PB_SVrefine2Falcon1plusDovetail_9148	T	TTAAATCAAATTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGTGGGAGTGCAGTGGCGCAATCTAGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCAGCC	20	PASS	ClusterIDs=HG4_PB_HySA_7782:HG2_PB_pbsv_5168:HG4_PB_pbsv_5199:HG3_PB_SVrefine2Falcon1Dovetail_3195:HG3_PB_pbsv_5033:HG4_PB_SVrefine2Falcon1Dovetail_3155:HG4_PB_SVrefine2PBcRDovetail_2644:HG4_Ill_MetaSV_3979:HG4_Ill_GATKHCSBGrefine_3715:HG3_Ill_MetaSV_3982:HG3_Ill_GATKHCSBGrefine_3527:HG2_PB_SVrefine2Falcon2Bionano_2518:HG2_PB_SVrefine2Falcon1plusDovetail_9148:HG2_Ill_MetaSV_3803:HG2_Ill_GATKHCSBGrefine_3560:HG2_PB_HySA_9763;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3560:HG2_Ill_MetaSV_3803:HG2_PB_SVrefine2Falcon1plusDovetail_9148:HG2_PB_SVrefine2Falcon2Bionano_2518:HG3_Ill_GATKHCSBGrefine_3527:HG3_Ill_MetaSV_3982:HG4_Ill_GATKHCSBGrefine_3715:HG4_Ill_MetaSV_3979;NumExactMatchSVs=8;ClusterMaxShiftDist=0.223684;ClusterMaxSizeDiff=0.210526;ClusterMaxEditDist=0.289474;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=316;DistBack=7666;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:180256955-180256969;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4236.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:36:./.:28:10:5:21:./.:0:0:0:0:0/1:37:13:0/1:6:43:.:.:.
chr4	180353145	HG2_Ill_GATKHCSBGrefine_3561	G	GAAATCTGAAATAGTTCAGACGTTGACATACTCTTGGTTGCGTTGTAGGTAGTGAGTTAATCATCCAACATTACACTAAAACCCAATCATAGCCATAATTCCTTAAAAGTACCATTGTGTTTGCCTTGGAAATCTATCAGTTCCATTCAATTAGAGATCCTAAAGATCTATTTTCTTTACTCCTGAAATAATGGACAATAATGAATCATGTGAATCTTTTTAGTTTATAAGAAACTCCTGCTTTCTAAATTACCATTTTCCCCTGAGGAGCAAGACTTCTAATTAAGACAAGTTCCCAAATGTGTTTTATGTTCTTGTAATTATTTTAAAACATAACAGCAATAAAAAGTTATGCCTCTTCAGTGTGTTTTTATGTATTCTTGTCACCATACAGGTTCAAGAGGCATTTGCCATTTGAAATTATATTTTTTTTATTTTTACAAACCTGATTATTATCCAATAAGGCAAATATAGGTTTGACACCAAATATGCTCATATTTCATTTCCTAAGTATGCTCAGTTTACTTAATATTCAAATTATTTATATTTTATTTTAAATGTTAATTGCTGAATTTATTACTCATTTGTCTGAAACTGCCAAATCAATTGTTCAAATTGCAAATGGAAAATTAACAAGTTAACTTAATTCAGTTCTTAATGCATAAGGTTTATTATAATGAATATAGTGGTTAGCACATGTTACCTAGAGGAATTTTAATTAGTCCACAAAGAAATTTTTGTATCTCTGCAGAGAAATCCATTTAAAGATATGACTCCCAAAGCATGAGTGTGTTAGGGACCCAACCCATAACATGTTGAAACTTTAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3517:HG3_PB_pbsv_5034:HG4_PB_pbsv_5200:HG2_PB_PB10Xdip_21743:HG4_PB_HySA_7783:HG3_PB_SVrefine2PBcRDovetail_2387:HG3_Ill_SVrefine2DISCOVARDovetail_4036:HG3_Ill_MetaSV_3983:HG3_Ill_GATKHCSBGrefine_3528:HG2_Ill_MetaSV_3804:HG2_PB_SVrefine2PB10Xhap12_3751:HG4_Ill_GATKHCSBGrefine_3716:HG2_PB_SVrefine2PBcRplusDovetail_8506:HG2_PB_SVrefine2Falcon2Bionano_2519:HG2_PB_SVrefine2Falcon1plusDovetail_9149:HG2_Ill_SVrefine2DISCOVARplusDovetail_9982:HG2_Ill_GATKHCSBGrefine_3561:HG2_10X_SVrefine210Xhap12_3792:HG3_PB_SVrefine2Falcon1Dovetail_3196:HG2_PB_pbsv_5169:HG2_PB_assemblyticsPBcR_19853;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3792:HG2_Ill_GATKHCSBGrefine_3561:HG2_Ill_SVrefine2DISCOVARplusDovetail_9982:HG2_PB_SVrefine2Falcon1plusDovetail_9149:HG2_PB_SVrefine2Falcon2Bionano_2519:HG2_PB_SVrefine2PBcRplusDovetail_8506:HG4_Ill_GATKHCSBGrefine_3716;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0463734;ClusterMaxSizeDiff=0.0451843;ClusterMaxEditDist=0.194866;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=827;DistBack=15158;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=4:180353146-180353149;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:94:1/1:2:28:0:33:./.:0:0:0:0:1/1:0:15:0/1:9:71:.:.:.
chr4	180778573	HG2_Ill_GATKHCSBGrefine_3563	A	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGT	20	PASS	ClusterIDs=HG4_PB_HySA_7791:HG3_Ill_GATKHC_8753:HG3_Ill_GATKHCSBGrefine_3531:HG2_Ill_GATKHC_8721:HG2_Ill_GATKHCSBGrefine_3563:HG3_PB_pbsv_5038:HG2_PB_PB10Xdip_21744:HG4_PB_pbsv_5203:HG4_Ill_Krunchall_7764:HG2_Ill_scalpel_5141:HG2_Ill_Krunchall_7480:HG3_Ill_Spiral_5780:HG2_PB_assemblyticsPBcR_19859:HG2_Ill_FB_4796:HG3_Ill_scalpel_5255:HG3_Ill_GATKHC_8752:HG3_Ill_FB_4791:HG3_Ill_250bpfermikitraw_7088:HG3_PB_HySA_8019:HG2_PB_HySA_9768:HG2_PB_pbsv_5172;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3563:HG2_Ill_GATKHC_8721:HG3_Ill_GATKHCSBGrefine_3531:HG3_Ill_GATKHC_8753;NumExactMatchSVs=4;ClusterMaxShiftDist=0.290909;ClusterMaxSizeDiff=0.290909;ClusterMaxEditDist=0.290909;PBcalls=8;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=0;DistForward=19133;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=4:180778572-180778576;PctSeqSimilarity=0.9876;PctSizeSimilarity=0.9828;PctRecOverlap=0.6102;SizeDiff=-1;StartDistance=22;EndDistance=22;GTMatch=0;TruScore=86;MatchId=4238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:79:1/1:1:31:0:38:./.:0:0:0:0:./.:2:34:./.:.:.:.:.:.
chr4	181322219	HG2_PB_pbsv_5176	T	TCGCCCGGCTAATTTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGCATCTCCTTGATCTGTGATCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAAGCGCGGCCCCCAGCCA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3809:HG2_PB_pbsv_5176:HG2_PB_PB10Xdip_21746:HG3_PB_pbsv_5043:HG2_PB_SVrefine2PBcRplusDovetail_8510:HG2_PB_HySA_9777:HG2_PB_SVrefine2PB10Xhap12_3756;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_5176;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147287;ClusterMaxSizeDiff=0.139535;ClusterMaxEditDist=0.193798;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=137;DistBack=4764;DistForward=355;DistMin=355;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=4:181322220-181322219;PctSeqSimilarity=0.9664;PctSizeSimilarity=0.9781;PctRecOverlap=0.7956;SizeDiff=3;StartDistance=27;EndDistance=27;GTMatch=0;TruScore=91;MatchId=4240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:22:0|1:21:0:4:22:./.:0:0:0:0:0/1:31:6:./.:.:.:.:.:.
chr4	181503034	HG2_PB_pbsv_5177	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGCGAGTCTCGCTCTGCGCCAGGCTGGGAGTGCAAGTGGCGGGGATCTCGGCTCACTGCAAGCATCCGCCTCCGGGGTTCACCCATTCTACCTGCCTCAGCCTCCAAGAGCTGGGGACTTAACAGTCGCCCGCCACTACGCCCGGCAATTTTCTGCTTATTTTCAGTAAGAGACGGGAGGTTTCACCGTTTTTAGCCGGGATGGTTCGATTCTCTTGACCTCAGTGATCCGGCCCGCCTCAAGGCCTCCCAAGTAATGCTGGGATTACAGGCGTGAGCCACCGCGCAAGCCCGAGCCAAAGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3158:HG3_PB_SVrefine2Falcon1Dovetail_3199:HG4_PB_pbsv_5208:HG2_Ill_breakscan11_3518:HG2_PB_pbsv_5177:HG4_PB_HySA_7798:HG2_PB_SVrefine2Falcon2Bionano_2523:HG2_PB_SVrefine2Falcon1plusDovetail_9153:HG2_PB_HySA_9778;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_5177;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0870871;ClusterMaxSizeDiff=0.0780781;ClusterMaxEditDist=0.280967;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=337;DistBack=-5;DistForward=2208;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=4:181503035-181503039;PctSeqSimilarity=0.9292;PctSizeSimilarity=0.9585;PctRecOverlap=0.9555;SizeDiff=14;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=94;MatchId=4241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:33:0|1:30:1:1:24:./.:0:0:0:0:0/1:37:7:0/1:5:13:.:.:.
chr4	182086432	HG3_Ill_GATKHCSBGrefine_3543	A	ATATATATACGTGTATATATATATATATACGTGTATATATATAGATACACGTGTATATATATATATATACGTGTATATATATATATATATACACGTGTACATGTATATATATATATACACGTGTACGTGTATATATATATATATATATATATACACGTG	20	PASS	ClusterIDs=HG2_PB_pbsv_5186:HG2_PB_HySA_9793:HG3_PB_HySA_8037:HG2_PB_assemblyticsPBcR_19879:HG2_PB_HySA_9794:HG4_Ill_MetaSV_3984:HG4_Ill_manta_1310:HG3_Ill_MetaSV_3989:HG2_Ill_MetaSV_3813:HG4_PB_SVrefine2PBcRDovetail_2652:HG4_Ill_SVrefine2DISCOVARDovetail_3968:HG4_Ill_GATKHCSBGrefine_3728:HG3_Ill_GATKHCSBGrefine_3543:HG2_PB_SVrefine2PBcRplusDovetail_8515:HG2_PB_SVrefine2PB10Xhap12_3761:HG2_PB_SVrefine2Falcon2Bionano_2529:HG2_Ill_SVrefine2DISCOVARplusDovetail_9995:HG2_Ill_GATKHCSBGrefine_3573:HG2_10X_SVrefine210Xhap12_3804:HG3_PB_SVrefine2Falcon1Dovetail_3204:HG4_PB_SVrefine2Falcon1Dovetail_3164:HG2_PB_SVrefine2Falcon1plusDovetail_9158:HG4_Ill_150bpfermikitraw_7067:HG4_PB_pbsv_5216:HG2_Ill_250bpfermikitraw_7322:HG2_Ill_150bpfermikitraw_6833;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3804:HG2_Ill_GATKHCSBGrefine_3573:HG2_Ill_SVrefine2DISCOVARplusDovetail_9995:HG2_PB_SVrefine2Falcon2Bionano_2529:HG2_PB_SVrefine2PB10Xhap12_3761:HG2_PB_SVrefine2PBcRplusDovetail_8515:HG3_Ill_GATKHCSBGrefine_3543:HG4_Ill_GATKHCSBGrefine_3728:HG4_Ill_SVrefine2DISCOVARDovetail_3968:HG4_PB_SVrefine2PBcRDovetail_2652;NumExactMatchSVs=10;ClusterMaxShiftDist=0.1375;ClusterMaxSizeDiff=0.111801;ClusterMaxEditDist=0.312684;PBcalls=13;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=4;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=158;DistBack=13;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=4:182086406-182086456;PctSeqSimilarity=0.9876;PctSizeSimilarity=0.9753;PctRecOverlap=0.9755;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:2:16:0:22:./.:0:0:0:0:1/1:0:22:./.:.:.:.:.:.
chr4	182725240	HG4_Ill_GATKHC_8823	G	GGAAGGGAGGGAGGAAGGAAGGAGAAGGAGGGAGGGAAAGGGAGGGAGGGAGGGAGGAACCAAGGAAGGAAGGAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_5219:HG2_PB_HySA_9801:HG4_Ill_scalpel_5072:HG4_Ill_GATKHC_8823:HG2_Ill_GATKHC_8754;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_GATKHC_8754:HG4_Ill_GATKHC_8823:HG4_Ill_scalpel_5072;NumExactMatchSVs=3;ClusterMaxShiftDist=0.025974;ClusterMaxSizeDiff=0.025974;ClusterMaxEditDist=0.12987;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=75;DistBack=113;DistForward=82;DistMin=82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=214;REFWIDENED=4:182725127-182725340;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4243.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:20:./.:35:2:7:17:./.:0:0:0:0:0/1:9:11:./.:.:.:.:.:.
chr4	184543813	HG4_Ill_MetaSV_3988	C	CATGAGGTCAGGAGATCAAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3817:HG4_PB_pbsv_5236:HG3_PB_SVrefine2PBcRDovetail_2411:HG3_PB_pbsv_5070:HG2_PB_SVrefine2Falcon1plusDovetail_9172:HG2_PB_pbsv_5205:HG2_Ill_SVrefine2DISCOVARplusDovetail_10013:HG4_Ill_GATKHCSBGrefine_3736:HG3_Ill_GATKHCSBGrefine_3554:HG2_Ill_GATKHCSBGrefine_3583:HG2_PB_SVrefine2Falcon2Bionano_2544:HG3_PB_SVrefine2Falcon1Dovetail_3220:HG3_PB_HySA_8079:HG2_PB_HySA_9836:HG4_Ill_MetaSV_3988:HG3_Ill_MetaSV_3996;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_3817:HG4_Ill_MetaSV_3988:HG3_Ill_MetaSV_3996;NumExactMatchSVs=3;ClusterMaxShiftDist=0.246014;ClusterMaxSizeDiff=0.241458;ClusterMaxEditDist=0.311213;PBcalls=9;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=235;DistBack=10;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=238;REFWIDENED=4:184543814-184544051;PctSeqSimilarity=0.9753;PctSizeSimilarity=0.9702;PctRecOverlap=0.9447;SizeDiff=7;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=96;MatchId=4245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:22:0|1:35:0:0:21:./.:0:0:0:0:0/1:24:8:./.:.:.:.:.:.
chr4	184546488	HG3_Ill_250bpfermikitraw_7136	A	ATATATATATGTATGTATATATATATGTGTATATATATATGTATATATATATGTATGTGTATATATATATATGTATGTGTGTGTG	20	PASS	ClusterIDs=HG2_PB_HySA_9837:HG4_Ill_GATKHC_8846:HG3_Ill_GATKHC_8805:HG3_Ill_GATKHCSBGrefine_3555:HG2_Ill_GATKHC_8778:HG2_Ill_GATKHCSBGrefine_3584:HG4_Ill_GATKHCSBGrefine_3737:HG3_PB_HySA_8080:HG2_Ill_manta_1497:HG4_Ill_manta_1316:HG3_PB_pbsv_5071:HG3_Ill_Krunchall_7430:HG2_PB_pbsv_5206:HG3_Ill_250bpfermikitraw_7136:HG3_Ill_150bpfermikitraw_6970:HG2_Ill_250bpfermikitraw_7354:HG2_Ill_150bpfermikitraw_6869:HG4_Ill_Krunchall_7819:HG4_Ill_250bpfermikitraw_7409:HG4_Ill_150bpfermikitraw_7103;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6869:HG2_Ill_250bpfermikitraw_7354:HG3_Ill_150bpfermikitraw_6970:HG3_Ill_250bpfermikitraw_7136:HG3_Ill_Krunchall_7430;NumExactMatchSVs=5;ClusterMaxShiftDist=0.236025;ClusterMaxSizeDiff=0.236025;ClusterMaxEditDist=0.282051;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=84;DistBack=23;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=4:184546467-184546520;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4246.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:0|1:30:9:3:18:./.:0:0:0:0:0/1:13:19:./.:.:.:.:.:.
chr4	184644436	HG4_Ill_SVrefine2DISCOVARDovetail_3987	G	GCACCTGGCCTCTCTGCTGCATCTGGCCTGTCTGCTGCACCTGGCCTCTCTGCCCCACCTGGCCTCTCTGCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9173:HG4_PB_pbsv_5238:HG2_PB_HySA_9838:HG4_PB_HySA_7845:HG4_PB_SVrefine2PBcRDovetail_2663:HG4_Ill_SVrefine2DISCOVARDovetail_3987:HG4_Ill_GATKHC_8847:HG4_Ill_250bpfermikitraw_7410:HG4_Ill_150bpfermikitraw_7104;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9173:HG4_PB_SVrefine2PBcRDovetail_2663:HG4_Ill_SVrefine2DISCOVARDovetail_3987:HG4_Ill_GATKHC_8847:HG4_Ill_250bpfermikitraw_7410:HG4_Ill_150bpfermikitraw_7104;NumExactMatchSVs=6;ClusterMaxShiftDist=0.027027;ClusterMaxSizeDiff=0.027027;ClusterMaxEditDist=0.189189;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=72;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=181;REFWIDENED=4:184644437-184644617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:22:./.:7:8:10:9:./.:0:0:0:0:0/1:24:5:./.:.:.:.:.:.
chr4	184778573	HG2_Ill_manta_1499	C	CAGGACTGGTTATCCTGCAGGACTGGTTATCCCACAGGACTCGTTGCCTCGT	20	PASS	ClusterIDs=HG3_Ill_Spiral_5819:HG4_PB_pbsv_5245:HG4_Ill_svaba_6853:HG2_PB_pbsv_5213:HG2_PB_PB10Xdip_21774:HG2_Ill_breakscan11_3519:HG4_Ill_manta_1317:HG4_Ill_Krunchall_7820:HG4_Ill_GATKHC_8848:HG4_Ill_GATKHCSBGrefine_3738:HG4_Ill_250bpfermikitraw_7412:HG4_Ill_150bpfermikitraw_7106:HG3_Ill_svaba_6871:HG3_Ill_manta_1232:HG3_Ill_Krunchall_7435:HG3_Ill_GATKHCSBGrefine_3557:HG3_Ill_250bpfermikitraw_7140:HG3_Ill_150bpfermikitraw_6973:HG2_PB_assemblyticsPBcR_19919:HG2_Ill_svaba_6731:HG2_Ill_manta_1499:HG2_Ill_SpiralSDKrefine_13048:HG2_Ill_Krunchall_7540:HG2_Ill_GATKHC_8781:HG2_Ill_GATKHCSBGrefine_3587:HG2_Ill_250bpfermikitraw_7357:HG2_Ill_150bpfermikitraw_6873:HG3_PB_pbsv_5078;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6873:HG2_Ill_250bpfermikitraw_7357:HG2_Ill_GATKHCSBGrefine_3587:HG2_Ill_GATKHC_8781:HG2_Ill_Krunchall_7540:HG2_Ill_SpiralSDKrefine_13048:HG2_Ill_manta_1499:HG2_Ill_svaba_6731:HG2_PB_assemblyticsPBcR_19919:HG3_Ill_150bpfermikitraw_6973:HG3_Ill_250bpfermikitraw_7140:HG3_Ill_GATKHCSBGrefine_3557:HG3_Ill_Krunchall_7435:HG3_Ill_Spiral_5819:HG4_Ill_svaba_6853:HG4_Ill_manta_1317:HG4_Ill_Krunchall_7820:HG4_Ill_GATKHC_8848:HG4_Ill_GATKHCSBGrefine_3738:HG4_Ill_250bpfermikitraw_7412:HG4_Ill_150bpfermikitraw_7106:HG3_Ill_svaba_6871:HG3_Ill_manta_1232;NumExactMatchSVs=23;ClusterMaxShiftDist=0.132075;ClusterMaxSizeDiff=0.0754717;ClusterMaxEditDist=0.293578;PBcalls=5;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=9;REFWIDENED=4:184778572-184778583;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:51:1/1:2:13:0:14:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr4	185779936	HG2_PB_HySA_9862	C	CGGGGTCCCAAAGGTCCCAGCTGGTCCTCTGAAGACCTGGGATCACAACTCCACATCGTCACCTT	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_21783:HG4_PB_HySA_7866:HG2_PB_HySA_9862:HG2_PB_pbsv_5224;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_9862;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0967742;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.186047;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=64;DistBack=26;DistForward=131;DistMin=26;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=705;REFWIDENED=4:185779365-185780069;PctSeqSimilarity=0.9923;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=4249.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:1/1:1:26:1:38:./.:0:0:0:0:./.:7:0:./.:.:.:.:.:.
chr4	185875941	HG4_PB_SVrefine2Falcon1Dovetail_3187	T	TAAAAGGCCTGTCTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAACGGTGAAACCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3187:HG2_PB_pbsv_5225:HG3_PB_pbsv_5089:HG3_PB_HySA_8105:HG2_Ill_breakscan11_3520:HG2_PB_HySA_9863:HG3_PB_SVrefine2Falcon1Dovetail_3231:HG3_PB_SVrefine2PBcRDovetail_2425;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_3187;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0853659;ClusterMaxSizeDiff=0.0792683;ClusterMaxEditDist=0.161585;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=2770;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=4:185875942-185875956;PctSeqSimilarity=0.9863;PctSizeSimilarity=0.9728;PctRecOverlap=0.9758;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:41:1|0:7:26:17:3:./.:0:0:0:0:0/1:25:9:0/1:6:16:.:.:.
chr4	185984889	HG2_PB_SVrefine2Falcon2Bionano_2555	GCTAA	TATTTAGTAGAGACAGGGTTTCACCATATTAGTCAGGCTGGTCTCGAACTCCTGATCTCAAGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACTGCACCTGGCCGGAAGTGAGGTTATACAGCAGCATGTATTTAGTAGAGACAGGG	20	PASS	ClusterIDs=HG2_PB_pbsv_5227:HG3_Ill_SVrefine2DISCOVARDovetail_4082:HG2_PB_SVrefine2Falcon2Bionano_2555;NumClusterSVs=3;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2555:HG3_Ill_SVrefine2DISCOVARDovetail_4082;NumExactMatchSVs=2;ClusterMaxShiftDist=0.041543;ClusterMaxSizeDiff=0.0296736;ClusterMaxEditDist=0.0712166;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=163;DistBack=4986;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=159;REFWIDENED=4:185984894-185985052;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9819;PctRecOverlap=0.988;SizeDiff=-3;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:28:1|0:5:24:35:1:./.:0:0:0:0:0/1:20:25:./.:.:.:.:.:.
chr4	186361912	HG2_PB_SVrefine2PB10Xhap12_3789	T	TAAAGAAATACTGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACTGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_21787:HG4_PB_pbsv_5260:HG3_PB_pbsv_5098:HG2_PB_pbsv_5231:HG2_PB_assemblyticsPBcR_19941:HG4_PB_HySA_7871:HG4_PB_SVrefine2Falcon1Dovetail_3191:HG3_PB_SVrefine2Falcon1Dovetail_3235:HG2_Ill_manta_1505:HG4_PB_SVrefine2PBcRDovetail_2671:HG4_Ill_manta_1320:HG4_Ill_SVrefine2DISCOVARDovetail_3996:HG4_Ill_GATKHCSBGrefine_3751:HG3_PB_SVrefine2PBcRDovetail_2429:HG3_Ill_manta_1237:HG3_Ill_SVrefine2DISCOVARDovetail_4083:HG3_Ill_MetaSV_4004:HG3_Ill_GATKHCSBGrefine_3571:HG2_PB_SVrefine2PBcRplusDovetail_8544:HG2_PB_SVrefine2PB10Xhap12_3789:HG2_PB_SVrefine2Falcon1plusDovetail_9185:HG2_Ill_SVrefine2DISCOVARplusDovetail_10024:HG2_Ill_GATKHCSBGrefine_3601:HG2_10X_SVrefine210Xhap12_3832:HG2_PB_SVrefine2Falcon2Bionano_2558:HG2_PB_HySA_9878;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3832:HG2_Ill_GATKHCSBGrefine_3601:HG2_Ill_SVrefine2DISCOVARplusDovetail_10024:HG2_PB_SVrefine2Falcon1plusDovetail_9185:HG2_PB_SVrefine2PB10Xhap12_3789:HG2_PB_SVrefine2PBcRplusDovetail_8544:HG3_Ill_GATKHCSBGrefine_3571:HG3_Ill_MetaSV_4004:HG3_Ill_SVrefine2DISCOVARDovetail_4083:HG3_Ill_manta_1237:HG3_PB_SVrefine2PBcRDovetail_2429:HG4_Ill_GATKHCSBGrefine_3751:HG4_Ill_SVrefine2DISCOVARDovetail_3996:HG4_Ill_manta_1320:HG4_PB_SVrefine2PBcRDovetail_2671;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0857143;ClusterMaxSizeDiff=0.0761905;ClusterMaxEditDist=0.190031;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=303;DistBack=22711;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=4:186361913-186361924;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:85:1/1:0:15:1:20:./.:0:0:0:0:1/1:0:43:1/1:1:69:.:.:.
chr4	186382146	HG2_Ill_GATKHCSBGrefine_3602	T	TGGTAGTCACGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGCGCTATCCCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3192:HG3_PB_pbsv_5099:HG2_PB_pbsv_5232:HG3_PB_SVrefine2Falcon1Dovetail_3236:HG3_Ill_MetaSV_4005:HG3_Ill_GATKHCSBGrefine_3572:HG2_PB_SVrefine2Falcon1plusDovetail_9186:HG2_Ill_MetaSV_3825:HG2_Ill_GATKHCSBGrefine_3602;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3602:HG2_Ill_MetaSV_3825:HG2_PB_SVrefine2Falcon1plusDovetail_9186:HG3_Ill_GATKHCSBGrefine_3572:HG3_Ill_MetaSV_4005;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.156463;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=289;DistBack=8523;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=4:186382147-186382160;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:44:./.:18:9:8:24:./.:0:0:0:0:0/1:27:7:./.:.:.:.:.:.
chr4	187386635	HG3_Ill_svaba_6906	T	TGAAACAAGAAAATTTTAAATTAAATATATATTATATATATTTAGTACACATATATTTAAAATCA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6905:HG4_PB_pbsv_5281:HG2_PB_PB10Xdip_21806:HG3_PB_pbsv_5114:HG2_PB_SVrefine2Falcon2Bionano_2567:HG2_PB_pbsv_5252:HG2_PB_SVrefine2Falcon1plusDovetail_9200:HG4_PB_SVrefine2PBcRDovetail_2683:HG4_PB_SVrefine2Falcon1Dovetail_3204:HG4_Ill_svaba_6889:HG4_Ill_manta_1322:HG4_Ill_SVrefine2DISCOVARDovetail_4000:HG4_Ill_GATKHC_8890:HG4_Ill_GATKHCSBGrefine_3758:HG4_Ill_250bpfermikitraw_7445:HG4_Ill_150bpfermikitraw_7136:HG3_PB_SVrefine2PBcRDovetail_2434:HG3_Ill_svaba_6906:HG3_Ill_manta_1240:HG3_Ill_SVrefine2DISCOVARDovetail_4090:HG3_Ill_MetaSV_4012:HG3_Ill_Krunchall_7467:HG3_Ill_GATKHC_8844:HG3_Ill_GATKHCSBGrefine_3579:HG3_Ill_250bpfermikitraw_7172:HG3_Ill_150bpfermikitraw_6997:HG2_PB_SVrefine2PBcRplusDovetail_8555:HG2_PB_SVrefine2PB10Xhap12_3800:HG2_Ill_svaba_6772:HG2_Ill_manta_1508:HG2_Ill_SVrefine2DISCOVARplusDovetail_10034:HG2_Ill_GATKHC_8819:HG2_Ill_GATKHCSBGrefine_3610:HG2_Ill_250bpfermikitraw_7391;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6905:HG4_PB_SVrefine2PBcRDovetail_2683:HG4_PB_SVrefine2Falcon1Dovetail_3204:HG4_Ill_svaba_6889:HG4_Ill_manta_1322:HG4_Ill_SVrefine2DISCOVARDovetail_4000:HG4_Ill_GATKHC_8890:HG4_Ill_GATKHCSBGrefine_3758:HG4_Ill_250bpfermikitraw_7445:HG4_Ill_150bpfermikitraw_7136:HG3_PB_SVrefine2PBcRDovetail_2434:HG3_Ill_svaba_6906:HG3_Ill_manta_1240:HG3_Ill_SVrefine2DISCOVARDovetail_4090:HG3_Ill_MetaSV_4012:HG3_Ill_Krunchall_7467:HG3_Ill_GATKHC_8844:HG3_Ill_GATKHCSBGrefine_3579:HG3_Ill_250bpfermikitraw_7172:HG3_Ill_150bpfermikitraw_6997:HG2_PB_SVrefine2PBcRplusDovetail_8555:HG2_PB_SVrefine2PB10Xhap12_3800:HG2_Ill_svaba_6772:HG2_Ill_manta_1508:HG2_Ill_SVrefine2DISCOVARplusDovetail_10034:HG2_Ill_GATKHC_8819:HG2_Ill_GATKHCSBGrefine_3610:HG2_Ill_250bpfermikitraw_7391;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0930233;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.240602;PBcalls=11;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=6277;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=64;REFWIDENED=4:187386636-187386699;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4257.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:2:11:0:23:./.:0:0:0:0:1/1:0:66:./.:.:.:4665:.:.
chr4	187633979	HG2_Ill_GATKHC_8828	C	CGAGACATTGCCAAACACCCTCTAGGGCAGAAAGTCACACCCCGCAGAGAAGCACTAGATTAGGGAAGCCAAAA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_7399:HG4_PB_pbsv_5288:HG2_PB_PB10Xdip_21810:HG2_PB_HySA_9909:HG2_PB_SVrefine2PB10Xhap12_3806:HG4_PB_SVrefine2PBcRDovetail_2685:HG2_PB_pbsv_5258:HG4_Ill_svaba_6895:HG4_Ill_SVrefine2DISCOVARDovetail_4003:HG4_Ill_Krunchall_7864:HG4_Ill_GATKHC_8898:HG4_Ill_GATKHCSBGrefine_3762:HG2_PB_SVrefine2Falcon1plusDovetail_9204:HG2_Ill_svaba_6778:HG2_Ill_SVrefine2DISCOVARplusDovetail_10035:HG2_Ill_Krunchall_7578:HG2_Ill_GATKHC_8828:HG2_Ill_GATKHCSBGrefine_3613;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7399:HG4_Ill_svaba_6895:HG4_Ill_SVrefine2DISCOVARDovetail_4003:HG4_Ill_Krunchall_7864:HG4_Ill_GATKHC_8898:HG4_Ill_GATKHCSBGrefine_3762:HG2_PB_SVrefine2Falcon1plusDovetail_9204:HG2_Ill_svaba_6778:HG2_Ill_SVrefine2DISCOVARplusDovetail_10035:HG2_Ill_Krunchall_7578:HG2_Ill_GATKHC_8828:HG2_Ill_GATKHCSBGrefine_3613;NumExactMatchSVs=12;ClusterMaxShiftDist=0.141844;ClusterMaxSizeDiff=0.140845;ClusterMaxEditDist=0.239437;PBcalls=7;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=73;DistBack=10806;DistForward=23451;DistMin=10806;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=79;REFWIDENED=4:187633980-187634058;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:./.:20:16:5:14:./.:0:0:0:0:0/1:17:25:./.:.:.:.:.:.
chr4	187879298	HG2_Ill_svaba_6782	A	ATGAACTCATCCTGAAACCACAGAGCCCAGATTCTCCCTTTGTTTGAACTCATCCTGAAACCACAGAGCCCAGATTCTCCCTTTGTT	20	PASS	ClusterIDs=HG2_PB_pbsv_5263:HG4_Ill_svaba_6900:HG4_Ill_Krunchall_7869:HG2_Ill_svaba_6782:HG2_Ill_Krunchall_7582:HG2_Ill_250bpfermikitraw_7403:HG4_PB_pbsv_5292;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7403:HG2_Ill_Krunchall_7582:HG2_Ill_svaba_6782:HG4_Ill_Krunchall_7869:HG4_Ill_svaba_6900;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0561798;ClusterMaxSizeDiff=0.0449438;ClusterMaxEditDist=0.255556;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=30;DistForward=1164;DistMin=30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=4:187879268-187879319;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4259.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:14:0|1:15:2:2:10:./.:0:0:0:0:0/1:28:16:./.:.:.:.:.:.
chr4	188353544	HG2_PB_SVrefine2Falcon2Bionano_2578	G	GGGAGCACTTACCTACTGCGAAGCTGCTCCCCACTTCCCACCTCTTCTGTTATCCCTACACTCCAGCAGGAGCATTTACCTACTGGGAAGCTGCTCCCCACCTCCCACCTCTTCTTCTGTTATCCCTACACTCCAGCAGGAGCACTTGCCTACTGGGAAGCTGCTCCCCACCTCCCACCTCTTCTTCTGTCTCCCTACACTCCAGCAGGAGCACTTGCCTACTGGAAAGTTGCTCCCCACCTCCCACCTCTTCTTCTGTATCTCTACACTCCAGCAGGAGCACTTACCTACTGGGAAATTGCTCCCCACCTTCCACCTCCCACCTCTTCTTCTGTATCCCTACACTCCAGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9212:HG4_PB_pbsv_5298:HG2_PB_pbsv_5270:HG3_PB_SVrefine2Falcon1Dovetail_3256:HG4_Ill_GATKHC_8907:HG4_PB_HySA_7914:HG4_Ill_Spiral_433:HG2_PB_HySA_9920:HG2_Ill_SVrefine2DISCOVARplusDovetail_10041:HG4_PB_SVrefine2PBcRDovetail_2691:HG4_Ill_SVrefine2DISCOVARDovetail_4008:HG2_PB_SVrefine2Falcon2Bionano_2578:HG4_PB_SVrefine2Falcon1Dovetail_3212;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2578:HG4_Ill_SVrefine2DISCOVARDovetail_4008:HG4_PB_SVrefine2PBcRDovetail_2691;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0536723;ClusterMaxSizeDiff=0.0508475;ClusterMaxEditDist=0.177778;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=351;DistBack=95774;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=205;REFWIDENED=4:188353545-188353749;PctSeqSimilarity=0.9891;PctSizeSimilarity=0.9943;PctRecOverlap=0.6997;SizeDiff=-2;StartDistance=-105;EndDistance=-105;GTMatch=0;TruScore=89;MatchId=4260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:28:0:1:22:./.:0:0:0:0:0/1:11:10:./.:3:20:.:.:.
chr4	188373797	HG3_Ill_SVrefine2DISCOVARDovetail_4099	C	CCTCATCTGCACCTTATCTTTTTTCTTATAGTACTTATCACCTTCTAGCATACTATAAAAATTGTGTCTTTACCAACAAGAAGTTAGGACAAATACCTTCCCCAGAATATAAAACAGTTTCAGGGCACATAGTAGGTGCTTCGTAATTGTTAATTGAATGAACCCATTTTTCCAAACACCTAACATCTTCTTTCTCCAGAATTTACTTCTTCCAGGACAGCGACTAAGTAGCCTTTCACTTAACAAACCCAAAGGCCAGGAAGGCCTGCCCGGACTGCTCGGCTCTTTCCTACGACTCCGCCTACTCTGAATCCACCCACAAAACGCAGAGATCTGACCTTATCCTGTGAACAGGCTAAGATGTAACGCTGCCGTTATAAGAACAATTGCCAGCTACTTGAAAATTCACCTTTTAAATGCCTTAAAAATGTAATAGTAACTTTTCATTAAAGTTACTTTTCTGCTTAGTTTGACAGGTTCAGTTTATTTTTTAATATCATTACAAAATGTCAACCTATTCTTTTCCTCATATCGTTCTATGCATAGCGCAGTTACACACACACACACACACACACACACACATACACACACACACACACACACAGGTTCGCCTGTTCATGAGACAGTGTCTGTTAGAACCAAGAGCAGCCTGTCCTGAAGTCAAGTCGTAGCTCAGCTGCACAAGCATGGGCAACTTTGACTAACTTCTCCGCATTCACTTGAATCAT	20	PASS	ClusterIDs=HG3_PB_pbsv_5129:HG2_PB_pbsv_5271:HG2_PB_PB10Xdip_21880:HG2_PB_assemblyticsPBcR_19985:HG2_Ill_breakscan11_3521:HG4_PB_SVrefine2Falcon1Dovetail_3213:HG3_PB_SVrefine2Falcon1Dovetail_3257:HG2_PB_SVrefine2PBcRplusDovetail_8565:HG3_PB_SVrefine2PBcRDovetail_2444:HG3_Ill_SVrefine2DISCOVARDovetail_4099:HG3_Ill_MetaSV_4016:HG3_Ill_GATKHCSBGrefine_3583:HG2_Ill_MetaSV_3832:HG2_Ill_GATKHCSBGrefine_3617:HG2_10X_SVrefine210Xhap12_3854:HG2_PB_SVrefine2PB10Xhap12_3817;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3854:HG2_Ill_GATKHCSBGrefine_3617:HG2_Ill_MetaSV_3832:HG3_Ill_GATKHCSBGrefine_3583:HG3_Ill_MetaSV_4016:HG3_Ill_SVrefine2DISCOVARDovetail_4099:HG3_PB_SVrefine2PBcRDovetail_2444;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0926431;ClusterMaxSizeDiff=0.0926431;ClusterMaxEditDist=0.164706;PBcalls=9;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=727;DistBack=20086;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=4:188373798-188373799;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:61:./.:18:24:12:14:./.:0:0:0:0:0/1:29:13:0/1:15:59:.:.:.
chr4	188525100	HG3_PB_pbsv_5130	C	CTCCTCTCCGTCCCTCGCCCTCTCCTCTCCTCCGCCTCCGCCTCTCCTCTCGCTCGCGCCTCTTCCTCTCCTCCCTCCCCTCTCCTCTCCTCCTCTCCTCTCGTCTCCTCCCTCTCCTTCCTCCCTCCCCTCTCCTCTCCTCCCTCCCCTTCCTTCCTCCTCTCCTCATCCTCCCCTCCCTCTTCCGTCCGGCCCTCCGCCCTCCTTGCTCACTCTCCTCCCCTCCCTCTCCTCTCGCTCTCTCGGTCCTCGTCGCCTCTCCCTCTCCTTCCTCTCCCTCCCCTCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2579:HG3_PB_pbsv_5130:HG3_PB_SVrefine2PBcRDovetail_2446:HG2_PB_SVrefine2Falcon1plusDovetail_9214:HG3_PB_SVrefine2Falcon1Dovetail_3258:HG2_PB_SVrefine2PB10Xhap12_3819:HG4_PB_SVrefine2Falcon1Dovetail_3214:HG2_PB_SVrefine2PBcRplusDovetail_8566:HG4_PB_pbsv_5299;NumClusterSVs=9;ExactMatchIDs=HG3_PB_pbsv_5130;NumExactMatchSVs=1;ClusterMaxShiftDist=0.2976;ClusterMaxSizeDiff=0.2976;ClusterMaxEditDist=0.356589;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=285;DistBack=17;DistForward=30;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=222;REFWIDENED=4:188525030-188525251;PctSeqSimilarity=0.8949;PctSizeSimilarity=0.9468;PctRecOverlap=0.5116;SizeDiff=-16;StartDistance=-139;EndDistance=-139;GTMatch=1;TruScore=78;MatchId=4262.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:42:1/1:1:7:1:13:./.:0:0:0:0:./.:7:0:./.:.:.:.:.:.
chr4	188989360	HG2_10X_SVrefine210Xhap12_3859	A	GCCTCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCACCTCTGCCCGGCCACCG	20	PASS	ClusterIDs=HG2_PB_pbsv_5277:HG3_PB_SVrefine2PBcRDovetail_2450:HG2_PB_SVrefine2Falcon2Bionano_2583:HG2_10X_SVrefine210Xhap12_3859:HG2_PB_SVrefine2Falcon1plusDovetail_9216:HG3_PB_HySA_8183:HG3_PB_pbsv_5138;NumClusterSVs=7;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3859:HG2_PB_SVrefine2Falcon2Bionano_2583;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0707396;ClusterMaxSizeDiff=0.0707396;ClusterMaxEditDist=0.228571;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=155;DistBack=16;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=86;REFWIDENED=4:188989274-188989359;PctSeqSimilarity=0.9885;PctSizeSimilarity=0.9936;PctRecOverlap=0.8854;SizeDiff=-1;StartDistance=17;EndDistance=17;GTMatch=0;TruScore=95;MatchId=4263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:24:0|1:32:2:2:21:./.:0:0:0:0:0/1:19:7:./.:.:.:.:.:.
chr4	189081046	HG3_PB_pbsv_5139	T	TTCCTTCCGGTCTGAACAGTGAACTCCTCCGCATGGACTCACGGTTCACCTCCTTCCGGTCTGAACAGTGGAACTCCTCCGCATCAAACTCACCCATTCACCCCTTCCGGTCTAAACAGTGAAACGCCCTCCGATGGACTCACAGAGTTCACCTTCCTTCCGGTCTAAACAGTGAACGCCTCCGCAATCGACTCACGGGTTCACCTCCTTCCCGGTCTGAAAACAGTGAACTGCCTCCGCATGGACTCACGGGTTTCACCTCCTTCCGGTCTGAAAAGTGAACGCCTCCGCATCGACTCACGGGTTTCACCTCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3262:HG4_PB_pbsv_5308:HG4_PB_HySA_7925:HG3_PB_pbsv_5139:HG4_PB_SVrefine2PBcRDovetail_2696:HG2_PB_pbsv_5278;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_5139;NumExactMatchSVs=1;ClusterMaxShiftDist=0.132203;ClusterMaxSizeDiff=0.128814;ClusterMaxEditDist=0.308197;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=313;DistBack=179;DistForward=10484;DistMin=179;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=416;REFWIDENED=4:189080760-189081175;PctSeqSimilarity=0.9708;PctSizeSimilarity=0.9553;PctRecOverlap=0.754;SizeDiff=14;StartDistance=-70;EndDistance=-70;GTMatch=0;TruScore=89;MatchId=4264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:17:./.:17:3:4:6:./.:0:0:0:0:0/0:15:0:./.:2:2:.:.:.
chr4	189790611	HG2_PB_SVrefine2PBcRplusDovetail_8581	T	TTCATTTAATATCATATACATATGTACTGAGGGCCTACTGCATGTCTATAGTTATAGTAGTGACACACATCACATATGAGCTCCCACTTCCATC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3868:HG3_PB_pbsv_5158:HG2_PB_HySA_9957:HG2_PB_pbsv_5297:HG3_PB_HySA_8200:HG4_PB_HySA_7935:HG4_PB_SVrefine2Falcon1Dovetail_3225:HG4_PB_pbsv_5322:HG4_Ill_Krunchall_7895:HG3_Ill_Krunchall_7496:HG3_Ill_GATKHC_8889:HG3_Ill_250bpfermikitraw_7206:HG2_Ill_Krunchall_7612:HG2_Ill_250bpfermikitraw_7432:HG2_Ill_150bpfermikitraw_6943:HG2_PB_PB10Xdip_21950:HG4_PB_SVrefine2Falcon1Dovetail_3224:HG3_PB_SVrefine2PBcRDovetail_2460:HG3_PB_SVrefine2Falcon1Dovetail_3273:HG4_PB_SVrefine2PBcRDovetail_2703:HG4_Ill_SVrefine2DISCOVARDovetail_4020:HG3_Ill_SVrefine2DISCOVARDovetail_4113:HG2_PB_SVrefine2PBcRplusDovetail_8581:HG2_PB_SVrefine2PB10Xhap12_3830:HG2_PB_SVrefine2Falcon2Bionano_2593:HG2_PB_SVrefine2Falcon1plusDovetail_9229:HG2_Ill_SVrefine2DISCOVARplusDovetail_10049;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3868:HG4_PB_SVrefine2PBcRDovetail_2703:HG4_Ill_SVrefine2DISCOVARDovetail_4020:HG3_Ill_SVrefine2DISCOVARDovetail_4113:HG2_PB_SVrefine2PBcRplusDovetail_8581:HG2_PB_SVrefine2PB10Xhap12_3830:HG2_PB_SVrefine2Falcon2Bionano_2593:HG2_PB_SVrefine2Falcon1plusDovetail_9229:HG2_Ill_SVrefine2DISCOVARplusDovetail_10049;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0631579;ClusterMaxSizeDiff=0.052356;ClusterMaxEditDist=0.329897;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=93;DistBack=636;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=100;REFWIDENED=4:189790612-189790711;PctSeqSimilarity=0.9949;PctSizeSimilarity=1;PctRecOverlap=0.957;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=4266.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:13:78:1/1:7:28:4:31:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr4	189804184	HG2_PB_SVrefine2Falcon2Bionano_2597	A	GAGGCGGGCAGATCAGTAGAGATCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTGTCTACTAAAAAATAGAAAAAAAATTAGCCGGGCACGGTGGCTTATGCCTGTAATCCCAGCACTTTGGGAGGCCG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3869:HG4_PB_SVrefine2PBcRDovetail_2707:HG4_Ill_SVrefine2DISCOVARDovetail_4023:HG2_PB_SVrefine2Falcon2Bionano_2597:HG2_10X_SVrefine210Xhap12_3870:HG4_PB_SVrefine2Falcon1Dovetail_3229:HG4_Ill_GATKHCSBGrefine_3777:HG2_Ill_GATKHCSBGrefine_3633:HG2_PB_HySA_9961:HG4_PB_HySA_7940:HG4_Ill_MetaSV_4014:HG2_PB_pbsv_5302:HG2_PB_SVrefine2Falcon1plusDovetail_9234:HG4_PB_pbsv_5327;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3870:HG2_PB_SVrefine2Falcon2Bionano_2597:HG4_Ill_SVrefine2DISCOVARDovetail_4023:HG4_PB_SVrefine2PBcRDovetail_2707;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0569395;ClusterMaxSizeDiff=0.0283688;ClusterMaxEditDist=0.203509;PBcalls=8;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=139;DistBack=8555;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=4:189804146-189804183;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9928;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:25:0|1:32:1:5:24:./.:0:0:0:0:0/0:20:0:./.:.:.:.:.:.
chr4	189877453	HG4_PB_SVrefine2PBcRDovetail_2709	C	CTTCCAAGTTTCCGTCTTGAGACAATGGGGAGATGTCTAGCTATTAACCTAAATTAGAGACAGTCAATAGTGAAACATATTGAAGGGGATTTTGAATTCAAGTTATCCAATGGGATAGGTCCAATGGGTGTTATGAATTTCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2599:HG4_PB_pbsv_5331:HG2_PB_assemblyticsfalcon_20697:HG4_Ill_250bpfermikitraw_7488:HG2_PB_SVrefine2Falcon1plusDovetail_9236:HG4_PB_HySA_7945:HG4_PB_SVrefine2PBcRDovetail_2709:HG4_Ill_SVrefine2DISCOVARDovetail_4024:HG3_PB_SVrefine2Falcon1Dovetail_3277;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2599:HG4_PB_SVrefine2PBcRDovetail_2709:HG4_Ill_SVrefine2DISCOVARDovetail_4024:HG3_PB_SVrefine2Falcon1Dovetail_3277;NumExactMatchSVs=4;ClusterMaxShiftDist=0.103806;ClusterMaxSizeDiff=0.0761246;ClusterMaxEditDist=0.19863;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=141;DistBack=18000;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=280;REFWIDENED=4:189877454-189877733;PctSeqSimilarity=0.9826;PctSizeSimilarity=1;PctRecOverlap=0.1702;SizeDiff=0;StartDistance=-117;EndDistance=-117;GTMatch=0;TruScore=71;MatchId=4268.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:34:0|1:35:2:1:26:./.:0:0:0:0:0/1:18:11:./.:.:.:.:.:.
chr4	189883268	HG4_PB_HySA_7946	C	CAATATGATTCCAGCCTCTTTCCAGTTAAGCCCCTTCTTCGGTGCTCAGCATTATTTTGCGGGGTCGATGGTAT	20	PASS	ClusterIDs=HG4_PB_HySA_7946:HG2_PB_pbsv_5304:HG2_PB_assemblyticsfalcon_20698:HG2_Ill_250bpfermikitraw_7436;NumClusterSVs=4;ExactMatchIDs=HG4_PB_HySA_7946;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0402685;ClusterMaxSizeDiff=0.0134228;ClusterMaxEditDist=0.187919;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=5600;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=337;REFWIDENED=4:189883269-189883605;PctSeqSimilarity=0.9891;PctSizeSimilarity=0.9863;PctRecOverlap=0.1233;SizeDiff=1;StartDistance=-64;EndDistance=-64;GTMatch=0;TruScore=69;MatchId=4269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:41:0|1:39:8:0:31:./.:0:0:0:0:0/0:27:1:./.:.:.:.:.:.
chr4	190076958	HG2_PB_SVrefine2Falcon2Bionano_2607	C	CCCACCAGGTGAGGCAAGGCTGCAGGGACGGGGAGGTGCACCCACCACGTGAGGCAAGGCTGCAGGGAGGGGAGGCGCACCCACCACGTGAGGCAAGGCTGCAGGGATGGGGAGGTGCACCCACCAGGTGAGGCAAGGCTGCAGGGAGGGGAGGCGCA	10	PASS	ClusterIDs=HG4_PB_HySA_7972:HG2_PB_assemblyticsfalcon_20711:HG2_PB_SVrefine2Falcon2Bionano_2607:HG2_PB_SVrefine2Falcon1plusDovetail_9249:HG3_PB_SVrefine2Falcon1Dovetail_3288:HG4_PB_SVrefine2Falcon1Dovetail_3240;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2607;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0444444;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.16875;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=157;DistBack=31;DistForward=53;DistMin=31;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=600;REFWIDENED=4:190076414-190077013;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9874;PctRecOverlap=0.673;SizeDiff=-2;StartDistance=51;EndDistance=51;GTMatch=0;TruScore=88;MatchId=4270.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:48:./.:9:13:8:9:./.:0:0:0:0:./.:0:7:./.:.:.:8104:.:.
chr4	190093612	HG2_Ill_svaba_6826	T	TGAGAGGAAAGAAAAATCAGGGGCTGGAGTTTCCCGAAGAGATTGAGGTTGGAGCTTCCACAAGTGTCTTGGTGCTATCACCACTGCTATGTGACATTTTCTAAGAGGAAACAAGAACCTGGAGACCCAGGAGTTGACCCCATTTTTAAACTGGGCAAGTCTTGGCAGTGGAAAGTCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3522:HG2_PB_assemblyticsfalcon_20712:HG3_PB_pbsv_5176:HG3_Ill_svaba_6955:HG3_Ill_manta_1248:HG3_Ill_SVrefine2DISCOVARDovetail_4123:HG3_Ill_MetaSV_4033:HG3_Ill_GATKHCSBGrefine_3601:HG3_Ill_Cortex_2847:HG2_PB_SVrefine2Falcon2Bionano_2608:HG2_PB_SVrefine2Falcon1plusDovetail_9250:HG2_Ill_svaba_6826:HG2_Ill_manta_1518:HG2_Ill_SpiralSDKrefine_13105:HG2_Ill_SVrefine2DISCOVARplusDovetail_10061:HG2_Ill_MetaSV_3846:HG2_Ill_GATKHCSBGrefine_3641:HG2_Ill_Cortex_6785:HG2_10X_SVrefine210Xhap12_3880:HG2_PB_HySA_9985;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3880:HG2_Ill_Cortex_6785:HG2_Ill_GATKHCSBGrefine_3641:HG2_Ill_MetaSV_3846:HG2_Ill_SVrefine2DISCOVARplusDovetail_10061:HG2_Ill_SpiralSDKrefine_13105:HG2_Ill_manta_1518:HG2_Ill_svaba_6826:HG2_PB_SVrefine2Falcon1plusDovetail_9250:HG2_PB_SVrefine2Falcon2Bionano_2608:HG3_Ill_Cortex_2847:HG3_Ill_GATKHCSBGrefine_3601:HG3_Ill_MetaSV_4033:HG3_Ill_SVrefine2DISCOVARDovetail_4123:HG3_Ill_manta_1248:HG3_Ill_svaba_6955;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0762943;ClusterMaxSizeDiff=0.0708447;ClusterMaxEditDist=0.0980926;PBcalls=5;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=177;DistBack=20;DistForward=2052;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=4:190093613-190093616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4271.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:32:0|1:34:0:4:27:./.:0:0:0:0:0/1:14:9:./.:.:.:8104:.:.
chr4	190326146	HG2_Ill_svaba_6834	C	CAAAATAAATTATTTTGGAGCTTTAAGATTTAATGACTTCCCTGCTTGATTTCGGACTTTCGTGGGGCCTGTA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_22007:HG4_PB_pbsv_5359:HG3_PB_pbsv_5189:HG2_PB_pbsv_5336:HG2_PB_HySA_9996:HG2_Ill_breakscan11_3524:HG4_Ill_svaba_6953:HG4_Ill_scalpel_5152:HG4_Ill_Krunchall_7911:HG4_Ill_GATKHC_8958:HG4_Ill_GATKHCSBGrefine_3797:HG4_Ill_250bpfermikitraw_7501:HG4_Ill_150bpfermikitraw_7197:HG3_Ill_svaba_6961:HG3_Ill_Spiral_5886:HG3_Ill_Krunchall_7516:HG3_Ill_GATKHC_8907:HG3_Ill_GATKHCSBGrefine_3609:HG3_Ill_250bpfermikitraw_7221:HG3_Ill_150bpfermikitraw_7043:HG2_Ill_svaba_6834:HG2_Ill_manta_1522:HG2_Ill_SpiralSDKrefine_13112:HG2_Ill_Krunchall_7634:HG2_Ill_GATKHC_8893:HG2_Ill_GATKHCSBGrefine_3651:HG2_Ill_250bpfermikitraw_7453:HG2_Ill_150bpfermikitraw_6964;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6964:HG2_Ill_250bpfermikitraw_7453:HG2_Ill_GATKHCSBGrefine_3651:HG2_Ill_GATKHC_8893:HG2_Ill_Krunchall_7634:HG2_Ill_SpiralSDKrefine_13112:HG2_Ill_manta_1522:HG2_Ill_svaba_6834:HG3_Ill_150bpfermikitraw_7043:HG3_Ill_250bpfermikitraw_7221:HG3_Ill_GATKHCSBGrefine_3609:HG3_Ill_GATKHC_8907:HG3_Ill_Krunchall_7516:HG3_Ill_Spiral_5886:HG3_Ill_svaba_6961:HG4_Ill_150bpfermikitraw_7197:HG4_Ill_250bpfermikitraw_7501:HG4_Ill_GATKHCSBGrefine_3797:HG4_Ill_GATKHC_8958:HG4_Ill_Krunchall_7911:HG4_Ill_scalpel_5152:HG4_Ill_svaba_6953;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0810811;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.175676;PBcalls=5;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=-3339;DistForward=-1;DistMin=-3339;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:190326145-190326147;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4273.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:68:1/1:3:23:0:26:./.:0:0:0:0:1/1:0:65:./.:.:.:.:.:.
chr4	190690477	HG2_Ill_GATKHCSBGrefine_3670	C	CTGATCTGGACTGGGCTCATTTGTGCAATTTGAGCTGGCTTCATTGGGGCAGGCCTGATCTTCTGGGCCGGACTCAGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3888:HG2_PB_pbsv_5358:HG3_Ill_GATKHC_8933:HG3_PB_pbsv_5210:HG3_Ill_GATKHCSBGrefine_3623:HG2_Ill_Krunchall_7645:HG2_Ill_GATKHC_8913:HG2_Ill_GATKHCSBGrefine_3670:HG2_Ill_250bpfermikitraw_7463:HG2_PB_SVrefine2Falcon1plusDovetail_9267;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7463:HG2_Ill_GATKHCSBGrefine_3670:HG2_Ill_GATKHC_8913:HG2_Ill_Krunchall_7645:HG3_Ill_GATKHCSBGrefine_3623:HG3_Ill_GATKHC_8933;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0779221;ClusterMaxEditDist=0.25974;PBcalls=3;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=77;DistBack=5997;DistForward=95;DistMin=95;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=151;REFWIDENED=4:190690424-190690574;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:23:./.:40:11:4:8:./.:0:0:0:0:0/1:21:11:./.:.:.:.:.:.
chr5	92415	HG2_PB_SVrefine2Falcon1plusDovetail_9280	G	GGCGGGTGGGGGCGCGAGCGGACGCGGGAGTAGGGGCGGGTGGGGGCGCGGGGTAGGGGCGGGGTGGGGCGCCGGGGTAGGGGCGGGGTGGGGGCGCCGGGGTAGGGGCGGGGTGGGGGCGCCGGGGTAGGGGCGGGGTGGGGGCGCCGGGGTAGGGCGGGGTGGGGGCGCGGGGGTAGGGGCGGGGTGGGGGCGCGGGGTAGGGGCGGTGGGGGGGGGGCCGGAGTAGGGCGGGTGGGGGCGCGGGGTAGGGGTGGGGTGGGGCGCGGGGGTAGGGCGGGTGGGGGGGGGGGTGGGGTGGGGGGGGGGTAGGGGCGGGGGGCGGGGGTAGGGGTGGGTGGGGGGGCGCCGGAGTAGGGGCGGGTGGGGGGCGCGGGGTAGGGTGGGGTGGGGGC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3266:HG3_PB_SVrefine2Falcon1Dovetail_3317:HG2_PB_SVrefine2Falcon1plusDovetail_9281:HG2_PB_pbsv_5377:HG4_PB_SVrefine2Falcon1Dovetail_3267:HG4_PB_pbsv_5399:HG3_PB_SVrefine2Falcon1Dovetail_3316:HG2_PB_SVrefine2Falcon1plusDovetail_9280:HG4_PB_SVrefine2PBcRDovetail_2739:HG2_PB_SVrefine2PBcRplusDovetail_8628:HG2_PB_SVrefine2PB10Xhap12_3872:HG3_PB_SVrefine2PBcRDovetail_2485:HG2_PB_SVrefine2Falcon2Bionano_2630;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9280;NumExactMatchSVs=1;ClusterMaxShiftDist=0.157823;ClusterMaxSizeDiff=0.14966;ClusterMaxEditDist=0.269542;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=394;DistBack=-207;DistForward=0;DistMin=-207;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=210;REFWIDENED=5:92416-92625;PctSeqSimilarity=0.93;PctSizeSimilarity=0.9289;PctRecOverlap=0.7899;SizeDiff=28;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=88;MatchId=4279.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:42:1/1:1:19:1:6:./.:0:0:0:0:./.:0:0:./.:2:6:.:.:.
chr5	141219	HG2_PB_PB10Xdip_22946	C	CCCCTGCACACCCCACAACCTCCCCTGCACACCCCCACCCCCTCCCCGCACACCCCACAACCTCCCCCTGCACACCCCACCCCCTCCCCTGCACACCCCACAACCTCCCCCTGCACACCCCACCCCCTCCCCTGCACACCCCACAACCTCCCCCTGCATACCCCACAACCTCCCCTGCACACCCCCACCCCCTCCCCTGCACACCCCCCTCTCCCCTGCACACCCCCACCCACTCCCCTGCACACCCCACAACCTCCCCCTGCACACCCCACCCCCTCCCCTGCACACCCCACAACCTCCCCCTGCACACCCCACCCCCTCCCCTGCACACCCCACAACCTCCCCCTGCATACCCACAACCTCCCCTGCACACCCCCACCCCTCCCCTGCACACCCCCCCTCTCCCCTGCACACCCCCACCCACTCCCCTGCACACCCCACCCCCTCCCCTGCACACCCCCACCCCCTCCCCGCACACGCACACCCCACCCCCTCCCCACACACTCCCACCCCCTCCCCGCACACCCCCATCCCCTCCCCTGCACACCCCACCCCCTCCCCTGCACACCCCCACCCCCTCCCCGCACACCCCCATCTCCTCCCCTGCACACCCCACAACCTCCCCTGCACACCCCCACCCCCTCCCCGCACACCCCCACCCCTCCCCTGCACACCCCCACCCCTCCCCGCACACCCCCATCTCCTCCCCTGCACACCCCACAACCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2740:HG2_PB_HySA_10016:HG4_PB_pbsv_5401:HG2_PB_PB10Xdip_22946:HG3_PB_pbsv_5224:HG2_PB_HySA_10015:HG2_PB_SVrefine2Falcon2Bionano_2631:HG2_PB_pbsv_5379:HG2_PB_SVrefine2PB10Xhap12_3873:HG2_PB_SVrefine2PBcRplusDovetail_8630:HG3_PB_SVrefine2Falcon1Dovetail_3319:HG4_PB_SVrefine2Falcon1Dovetail_3269:HG3_PB_SVrefine2PBcRDovetail_2486;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_22946;NumExactMatchSVs=1;ClusterMaxShiftDist=0.168129;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.280059;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=725;DistBack=-138;DistForward=17399;DistMin=-138;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=515;REFWIDENED=5:140842-141356;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9918;PctRecOverlap=0.9918;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:36:./.:0:1:0:1:./.:0:0:0:0:./.:0:0:1/1:1:10:.:695:.
chr5	194261	HG2_Ill_GATKHC_8929	A	ACTGTCCTGTGGTCTCACTGCCCCCCGCCGTCTGCTTTCTGAGCTGACATTCTGTCCTGTGGTCTCACTGCCCCCCGCCGTCTGCTTTCTGAGCTGACATT	20	PASS	ClusterIDs=HG2_Ill_GATKHC_8929:HG2_PB_SVrefine2PBcRplusDovetail_8632:HG4_PB_HySA_8014:HG4_PB_pbsv_5405:HG2_PB_HySA_10020:HG2_PB_pbsv_5383:HG2_PB_SVrefine2Falcon2Bionano_2634:HG2_PB_SVrefine2Falcon1plusDovetail_9284;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_8929:HG2_PB_SVrefine2Falcon1plusDovetail_9284;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0886699;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.238095;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=100;DistBack=-1;DistForward=123;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=152;REFWIDENED=5:194262-194413;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:37:0|1:24:5:1:29:./.:0:0:0:0:0/1:23:4:./.:.:.:.:.:.
chr5	317898	HG4_PB_SVrefine2PBcRDovetail_2750	T	TCTCCCCCCACAACCCTACACCTCCCGGACAACCCTGCACCTCCCCCACAGCCACCCTGCACCTCCCCGCCACAACCCTGCACCTCCCCCAACAACCCTTCAACTCCCCTCTCACCTTGCACCTGCCCCTCACCCTGCACCTCCCCCCATCCTGTACCTCCCCCTTCACCCTCCACCTACTCCCAACCCTGCATCTCCCCCCAACCCTGCACCTCCCCACATCCTTCACCTCCCTCCTCACCTGGCACCTCCCCCCATCCTTTCCCTCCCCCCTCACCCTGCACCTCCCTTGCCTGCACCTCCTCCCTCCCTCTCCCCCTCACCCTGCACCTCCCCCCTCCACTCCCCTCACCTCCCCCCCACTTTCCACCTCCCCCTCCACCTCCCCCTCACCTCCTCCCCAGCCTCCACCTCCCCCCTCACCTCCCCCCTCACCCACCACCTCCCGCCCTCACCCTCCACCTCCCCCCGCACCCTGCACCTCCCACCCTTACCCTGCACCTCCCCCCATCTTTTACCTCCCCCTCACCCTGCACCTCCCTCTCGCCCTGCACCTCCTCCCTCCCTCTCCCCCTCATCCTGCACCTCCCCCCTCCACGCCCCCTCACCTCCCCCCACCTTCCACCTCCCCCTCCACCTCCCCCCTCACTTCCCCCCCAGCCTCCACCTCCCCCCTCACCCTCCACCTCCCTTCCGCACCCTGCACCTCCCACCCTTACCCTGCACCTCCCCCATCTTTTACCTCCCTCCCACCCTGCATCTCCCCCAACCCTGCACCTCCCCCATCCTTCACCTCCCCTCTCACCCTCCACCTCCCCCACTCACCCTCCAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2642:HG4_PB_assemblyticsfalcon_20280:HG3_PB_SVrefine2Falcon1Dovetail_3331:HG4_PB_SVrefine2Falcon1Dovetail_3277:HG2_PB_SVrefine2Falcon1plusDovetail_9289:HG3_PB_SVrefine2PBcRDovetail_2489:HG4_PB_SVrefine2PBcRDovetail_2750:HG2_PB_SVrefine2PBcRplusDovetail_8648:HG2_PB_SVrefine2PB10Xhap12_3888;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_2750;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0854907;ClusterMaxSizeDiff=0.0842866;ClusterMaxEditDist=0.187765;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=831;DistBack=4927;DistForward=263;DistMin=263;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=274;REFWIDENED=5:317899-318172;PctSeqSimilarity=0.9502;PctSizeSimilarity=0.94;PctRecOverlap=0.6689;SizeDiff=-53;StartDistance=-266;EndDistance=-266;GTMatch=1;TruScore=85;MatchId=4282.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:79:1/1:2:26:0:23:./.:0:0:0:0:0/0:12:0:0/1:8:33:.:5459:.
chr5	495492	HG2_PB_SVrefine2PB10Xhap12_3906	G	GCTCCCCGCGCCATCGCCGACCCTCCCCACGCTCCACTCCCCGCACCATCACCGACCCTCCCCACGCTCCACTCCCCGCGCCATCGCCAACCCTCCCCACGCTCCACTCCCCACGCCATCGCCGACCCTCCCCACGCTCCACTCCCCACGCCATCGCCGACCCTCCCCACGCTCCACTCCCCACGCCATCGCCGACCCTCCCCACGCTCCACTCCCCGCGCCATCGCCGACCCTCCCCACGCTCCACTCCCCGCGCCATCGCCGACCCTCCCCACGCTCCACTCCCCGCGCCATCGCCGACCCTCCCCACGCTCCA	10	PASS	ClusterIDs=HG2_PB_HySA_10059:HG3_PB_SVrefine2Falcon1Dovetail_3351:HG3_PB_pbsv_5265:HG2_PB_pbsv_5425:HG2_PB_PB10Xdip_23792:HG2_PB_HySA_10060:HG2_PB_PB10Xdip_23793:HG2_PB_SVrefine2Falcon1plusDovetail_9304:HG2_PB_SVrefine2Falcon2Bionano_2658:HG2_PB_SVrefine2PB10Xhap12_3906:HG2_PB_SVrefine2PBcRplusDovetail_8662:HG4_PB_pbsv_5442;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3906;NumExactMatchSVs=1;ClusterMaxShiftDist=0.345238;ClusterMaxSizeDiff=0.345238;ClusterMaxEditDist=0.363095;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=315;DistBack=2987;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=595;REFWIDENED=5:495493-496087;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4284.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:1:23:1:16:./.:0:0:0:0:./.:0:7:./.:0:7:.:.:.
chr5	548890	HG2_PB_SVrefine2Falcon2Bionano_2664	T	TTTCCCTTAATCCATCTTCACATTCTGGTACCAATCTACCTGAAACTCTACTCGCTGAAATGGTCGATTATGCTCTTCCCTTGATCCGTCTTCACATTCTGGTACCAATCTACCTGAAACTCTACTGGCTGAAATGGTCGATTATGCTCTTCCCTCGATCCGTTTTCACAGTCTGGTACCAATCTACCTGAAACTCTACTGGCTGAAATGGTCGATTATGCTCTTCCCTTGATCCGTTTTCACATTCTGGTACCAATCTACCTGAAACTCTACTGGCTGAAATGGTCGATTATGCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2664:HG4_PB_pbsv_5450:HG3_PB_pbsv_5274:HG2_PB_SVrefine2Falcon1plusDovetail_9309:HG3_PB_SVrefine2Falcon1Dovetail_3355:HG4_PB_SVrefine2Falcon1Dovetail_3297;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2664:HG4_PB_SVrefine2Falcon1Dovetail_3297;NumExactMatchSVs=2;ClusterMaxShiftDist=0.099839;ClusterMaxSizeDiff=0.099839;ClusterMaxEditDist=0.215434;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=296;DistBack=3640;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=516;REFWIDENED=5:548891-549406;PctSeqSimilarity=0.9796;PctSizeSimilarity=0.9966;PctRecOverlap=0.4276;SizeDiff=1;StartDistance=-169;EndDistance=-169;GTMatch=0;TruScore=80;MatchId=4285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:22:0|1:33:1:0:16:./.:0:0:0:0:0/1:10:13:./.:.:.:.:.:.
chr5	682380	HG2_PB_SVrefine2PBcRplusDovetail_8677	A	AGGGGTCTCGCACTTGGGCCAGGGGGTTCTCACTAGGACCAGGGGCCTGTCAGTCACTAGGGCCGGGGCCTGTCCCTTGGGCCTGGAGCCTGTTACTAGGGCCTGGGGTCTGCCCCTTGGGCCTGGAGCCTGTTACTAGGACCTGGGGTCTGTCACTACAGCCAGGGGTCTGCCCCTTGAGCCTGGAGCCTGTAACTACGGCCTGGGGTCTGCCCCTTGGGCCTGGAGCCTGTTACTAGGACCTGGGGTCTGTCACTACAGCCAGGGGTCTGCCCCTTGAGCCTGGAGCCTGTAACTACGGCCT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10087:HG3_PB_pbsv_5287:HG3_PB_HySA_8287:HG2_PB_SVrefine2Falcon2Bionano_2673:HG2_PB_PB10Xdip_23867:HG4_PB_pbsv_5466:HG2_PB_PB10Xdip_23866:HG2_PB_pbsv_5443:HG2_PB_SVrefine2Falcon1plusDovetail_9319:HG3_PB_SVrefine2Falcon1Dovetail_3366:HG4_PB_SVrefine2PBcRDovetail_2768:HG4_PB_SVrefine2Falcon1Dovetail_3310:HG3_PB_SVrefine2PBcRDovetail_2509:HG3_Ill_SVrefine2DISCOVARDovetail_4157:HG2_PB_SVrefine2PBcRplusDovetail_8677:HG2_PB_SVrefine2PB10Xhap12_3927;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10087:HG4_PB_SVrefine2PBcRDovetail_2768:HG4_PB_SVrefine2Falcon1Dovetail_3310:HG3_PB_SVrefine2PBcRDovetail_2509:HG3_Ill_SVrefine2DISCOVARDovetail_4157:HG2_PB_SVrefine2PBcRplusDovetail_8677:HG2_PB_SVrefine2PB10Xhap12_3927;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0431177;ClusterMaxEditDist=0.272578;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=303;DistBack=2867;DistForward=157;DistMin=157;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=232;REFWIDENED=5:682381-682612;PctSeqSimilarity=0.9734;PctSizeSimilarity=0.9868;PctRecOverlap=0.6865;SizeDiff=4;StartDistance=-93;EndDistance=-93;GTMatch=0;TruScore=88;MatchId=4287.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:1:16:1:15:./.:0:0:0:0:1/1:0:15:1/1:1:14:.:5988:.
chr5	1223670	HG2_PB_SVrefine2Falcon1plusDovetail_9343	C	CTTCCACGGACAGGTCACCTCCGCTTTGCACGGAAGAATCTGGATGCTTACATTAAACTGGTGTTCTGAGAGTTCCTACGGACAGGTCACCTCCGCTTTGCACGGAAGAATCTGGATGCTTACATTAAACTGGTGTTCTGAGAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9343:HG4_PB_pbsv_5493:HG4_Ill_SVrefine2DISCOVARDovetail_4068:HG2_PB_pbsv_5468:HG2_PB_SVrefine2Falcon2Bionano_2687;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9343:HG4_Ill_SVrefine2DISCOVARDovetail_4068:HG2_PB_SVrefine2Falcon2Bionano_2687;NumExactMatchSVs=3;ClusterMaxShiftDist=0.12987;ClusterMaxSizeDiff=0.12987;ClusterMaxEditDist=0.268371;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=143;DistBack=4255;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=229;REFWIDENED=5:1223671-1223899;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9931;PctRecOverlap=0.9655;SizeDiff=-1;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=4290.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:35:0|1:36:3:2:30:./.:0:0:0:0:0/1:14:13:./.:.:.:.:.:.
chr5	1329507	HG2_PB_SVrefine2PBcRplusDovetail_8697	A	ACTCTGTTTGGTGGACAGGGCCTCAGGCCTCTGCTTGGTGGACAGGGCCTCAGGACTCACCACTGCTTGGTGGACAGGGCCTCAGGACTCTCTGCTTGGTGGACAGAGCCTCAGGACTCTCTGCTTGGTGGACAGAGCCTCAGGACTCTCTGCTTGGTGGACAGGGCCTCAGGACTCTCTGCTTGGTGGACAGGGCCTCAGGACT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9352:HG2_PB_pbsv_5479:HG3_PB_SVrefine2Falcon1Dovetail_3393:HG2_PB_SVrefine2PBcRplusDovetail_8697:HG2_PB_SVrefine2PB10Xhap12_3957:HG2_PB_SVrefine2Falcon2Bionano_2692;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9352:HG2_PB_SVrefine2PBcRplusDovetail_8697:HG2_PB_SVrefine2PB10Xhap12_3957:HG2_PB_SVrefine2Falcon2Bionano_2692;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0242131;ClusterMaxEditDist=0.154964;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=204;DistBack=-3506;DistForward=261;DistMin=-3506;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=669;REFWIDENED=5:1329508-1330176;PctSeqSimilarity=0.9819;PctSizeSimilarity=0.9951;PctRecOverlap=0.1073;SizeDiff=1;StartDistance=-182;EndDistance=-182;GTMatch=0;TruScore=69;MatchId=4292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:30:0|1:14:4:3:17:./.:0:0:0:0:./.:2:0:./.:.:.:.:9546:.
chr5	1435947	HG2_PB_PB10Xdip_23089	G	GGGTGAGGAACAGCCTTGAACGGTGGTGGCCAGTCCCCTCCTGGATGCTTCCCTGGGCACCTC	10	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_20367:HG2_PB_PB10Xdip_23090:HG2_PB_PB10Xdip_23089:HG4_PB_pbsv_5507:HG2_PB_assemblyticsPBcR_20140;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_23089;NumExactMatchSVs=1;ClusterMaxShiftDist=0.124031;ClusterMaxSizeDiff=0.108527;ClusterMaxEditDist=0.170543;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=62;DistBack=33;DistForward=20457;DistMin=33;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=449;REFWIDENED=5:1435795-1436243;PctSeqSimilarity=0.9868;PctSizeSimilarity=0.9841;PctRecOverlap=0.2063;SizeDiff=-1;StartDistance=50;EndDistance=50;GTMatch=0;TruScore=72;MatchId=4293.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:0|1:20:3:3:26:./.:0:0:0:0:0/1:7:2:./.:.:.:.:.:.
chr5	1645774	HG4_PB_SVrefine2Falcon1Dovetail_3346	T	CATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTACTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATACAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTGGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAGAAGTATAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23132:HG2_PB_HySA_10131:HG2_PB_pbsv_5492:HG4_PB_pbsv_5516:HG4_PB_HySA_8137:HG3_PB_HySA_8355:HG3_PB_pbsv_5341:HG2_PB_SVrefine2Falcon1plusDovetail_9363:HG3_PB_SVrefine2Falcon1Dovetail_3407:HG2_PB_SVrefine2PBcRplusDovetail_8706:HG3_PB_SVrefine2PBcRDovetail_2534:HG4_PB_assemblyticsfalcon_20382:HG4_PB_SVrefine2Falcon1Dovetail_3346:HG2_PB_SVrefine2PB10Xhap12_3969:HG2_Ill_breakscan11_3534;NumClusterSVs=15;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_3346:HG4_PB_assemblyticsfalcon_20382;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0850816;ClusterMaxSizeDiff=0.0850816;ClusterMaxEditDist=0.19909;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=852;DistBack=760;DistForward=5914;DistMin=760;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:1645775-1645773;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9953;PctRecOverlap=0.9953;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4294.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:33:./.:3:22:19:8:./.:0:0:0:0:0/1:29:11:0/1:26:87:.:.:.
chr5	1667436	HG2_PB_PB10Xdip_23137	C	CCTCCTCCCTCCTCCCCTCCTCCCCTCCTCCCCTCCTCCCCTCCTCCCCTCCTCCCCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8708:HG2_PB_SVrefine2PB10Xhap12_3971:HG2_PB_PB10Xdip_23137:HG3_PB_assemblyticsfalcon_20794:HG3_PB_assemblyticsfalcon_20795:HG4_PB_assemblyticsfalcon_20385:HG2_PB_PB10Xdip_23138:HG2_PB_pbsv_5496;NumClusterSVs=8;ExactMatchIDs=HG2_PB_PB10Xdip_23137;NumExactMatchSVs=1;ClusterMaxShiftDist=0.277778;ClusterMaxSizeDiff=0.259259;ClusterMaxEditDist=0.37037;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=57;DistBack=18;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=69;REFWIDENED=5:1667394-1667462;PctSeqSimilarity=0.9455;PctSizeSimilarity=0.8947;PctRecOverlap=0.8947;SizeDiff=6;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=91;MatchId=4295.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:53:1/1:10:34:0:19:./.:0:0:0:0:./.:2:1:./.:.:.:.:.:.
chr5	1812640	HG2_PB_SVrefine2Falcon2Bionano_2703	T	TGACTCCTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACGACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_8362:HG2_PB_HySA_10141:HG3_PB_pbsv_5352:HG2_PB_pbsv_5501:HG4_PB_SVrefine2PBcRDovetail_2790:HG2_PB_SVrefine2Falcon2Bionano_2703:HG4_PB_SVrefine2Falcon1Dovetail_3350:HG3_PB_SVrefine2Falcon1Dovetail_3411:HG4_Ill_MetaSV_4046:HG4_Ill_GATKHCSBGrefine_3879:HG2_Ill_breakscan11_3535:HG4_PB_HySA_8143;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2703:HG4_PB_SVrefine2PBcRDovetail_2790;NumExactMatchSVs=2;ClusterMaxShiftDist=0.242634;ClusterMaxSizeDiff=0.239168;ClusterMaxEditDist=0.280763;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=5415;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=5:1812641-1812652;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:44:0|1:36:0:3:30:./.:0:0:0:0:0/1:29:6:0/1:6:32:.:.:.
chr5	1939362	HG2_Ill_SVrefine2DISCOVARplusDovetail_10115	T	TGGGTCCCTACATAACTCTCACCTCCACCCGGGTCCCCTCATCACTCTCACCTTCCCCTAGGTCCCCACATCACTCTCACCTCCCCCC	20	PASS	ClusterIDs=HG3_PB_HySA_8381:HG2_PB_HySA_10155:HG2_Ill_SpiralSDKrefine_13206:HG2_PB_pbsv_5508:HG2_Ill_SVrefine2DISCOVARplusDovetail_10115:HG3_PB_pbsv_5361:HG2_Ill_GATKHCSBGrefine_3722;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3722:HG2_Ill_SVrefine2DISCOVARplusDovetail_10115:HG2_Ill_SpiralSDKrefine_13206;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0697674;ClusterMaxSizeDiff=0.0697674;ClusterMaxEditDist=0.272189;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=87;DistBack=8844;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=152;REFWIDENED=5:1939329-1939480;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4297.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:27:0|1:26:2:2:23:./.:0:0:0:0:./.:17:1:./.:.:.:.:.:.
chr5	2099123	HG3_PB_SVrefine2Falcon1Dovetail_3425	C	CCGCACCTGGGTGTGACCCCGAGACCCCAACACACCTGGGTATATCCCTGAGACCCCGACATACCTAGGTATGTCCCTGAGACCCCAACACACGTGGGTATATCCCTGAGACCCCGACACACCTAGGTATGTCCCTGAGACCCCGACACACCTAGGTATGTCCCTGAGACCCCAACACACCTGGGTATGTCCCTGAGACCCCGACACACCTAGGTATGTCCCTGAGACCCCAACACACATGGGTATATCCCTGAGACCCCAACACACCTGGATATATCCCTGAGACCCCGACATACCTAGGTATGTCCCTGAGACCCCGACATACCTAGGTATGTCCCTGAGACCCCAACACACATGGGTATATCTCTGAGACCCCAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3970:HG4_Ill_Spiral_448:HG3_PB_pbsv_5366:HG2_PB_PB10Xdip_23161:HG2_PB_PB10Xdip_23160:HG2_PB_HySA_10160:HG3_Ill_GATKHC_9058:HG2_Ill_GATKHCSBGrefine_3726:HG4_PB_pbsv_5537:HG3_PB_HySA_8385:HG2_PB_pbsv_5513:HG2_PB_SVrefine2Falcon1plusDovetail_9377:HG2_PB_SVrefine2Falcon2Bionano_2711:HG4_PB_SVrefine2Falcon1Dovetail_3359:HG3_PB_SVrefine2Falcon1Dovetail_3425:HG2_PB_SVrefine2PBcRplusDovetail_8722:HG2_PB_SVrefine2PB10Xhap12_3989:HG2_Ill_SVrefine2DISCOVARplusDovetail_10121;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3970:HG4_PB_SVrefine2Falcon1Dovetail_3359:HG3_PB_SVrefine2Falcon1Dovetail_3425:HG2_PB_SVrefine2PBcRplusDovetail_8722:HG2_PB_SVrefine2PB10Xhap12_3989:HG2_Ill_SVrefine2DISCOVARplusDovetail_10121;NumExactMatchSVs=6;ClusterMaxShiftDist=0.103038;ClusterMaxSizeDiff=0.103038;ClusterMaxEditDist=0.26528;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=377;DistBack=-377;DistForward=205;DistMin=-377;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=520;REFWIDENED=5:2099143-2099662;PctSeqSimilarity=0.9842;PctSizeSimilarity=1;PctRecOverlap=0.2361;SizeDiff=0;StartDistance=-288;EndDistance=-288;GTMatch=0;TruScore=74;MatchId=4298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:10:99:1/1:7:41:2:22:./.:0:0:0:0:1/1:0:8:./.:2:15:.:.:.
chr5	2650995	HG4_Ill_150bpfermikitraw_7314	A	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGATAGATGATAGAGATAGAT	20	PASS	ClusterIDs=HG2_PB_pbsv_5523:HG2_PB_HySA_10182:HG4_Ill_250bpfermikitraw_7632:HG4_Ill_150bpfermikitraw_7314:HG2_Ill_250bpfermikitraw_7587:HG2_Ill_150bpfermikitraw_7076:HG4_PB_pbsv_5545:HG4_Ill_scalpel_5226;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7076:HG2_Ill_250bpfermikitraw_7587:HG4_Ill_150bpfermikitraw_7314:HG4_Ill_250bpfermikitraw_7632;NumExactMatchSVs=4;ClusterMaxShiftDist=0.206897;ClusterMaxSizeDiff=0.206897;ClusterMaxEditDist=0.227642;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=63;DistBack=56447;DistForward=54;DistMin=54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=147;REFWIDENED=5:2650953-2651099;PctSeqSimilarity=0.9626;PctSizeSimilarity=0.9841;PctRecOverlap=0.5238;SizeDiff=1;StartDistance=30;EndDistance=30;GTMatch=0;TruScore=82;MatchId=4299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:46:0|1:27:6:2:38:./.:0:0:0:0:0/1:30:22:./.:.:.:.:.:.
chr5	3392194	HG2_PB_SVrefine2Falcon1plusDovetail_9390	T	TGGGGTGGCTGGGGAGGCTGGGGTGGCTGGGAAGATGAGTGGCTGGGGAGACTGGGGTGGCCAGAGAGGCTGGGAGGCTGGGGTGGCTGGAGAGGCTGGAGAGGCCAGGGTGACTGACTGGGGTGGCTGGGAGGCCGGGGAGGCTGGGGTGGCTGGAGAGGCTAGAGAGGCCAGGGTGACTGACTGGGGTGGCTGGGGAGACCGGGAGGCTGGGGAGGCTGGAGATGCCAGGGTGACTAGGGTGGCTGGGGAGGCTGGGGAGGCGGGGGAGGCTGGGGTAGCTAGGGTGGCTGGGAAGGCTGGGTGACGGGGGTGGCTGGGGAGGCCGGGGAGGCTGGGGTGGCTGGGGAGGCCAGGGTGACTGGGGTGGCTGGGGAGGCCAGGGTGACTGGGGTGGCTGGGGAGGCCAGGGAGGCTGGGGTGACTGGGAGGCCGGGGAGGCTGGGGGCTGGGGAGGCCGGGGTGACTGGGGTGGCTGGGGAGGCCAGGGAGGCTGGGGTGACTGGGGAGGCCGAAGAGGCTGGGGTGGCTGGGGAGGCCGGGGTGACTGGGGTGGCTGGGGAGGCCAGGGTGACTGGGGTGGCTGGGAGGCCAGGGAGGCTGGGTGGCTGGGAGGCCGGGTGACTGGGTGGCTGGGAGGCCGGGGTGACTGGGGTGGCTGGGAGGCCGGGGTGACTGGGGTGGCTGGGGAGGCCGGGGTGACTGGGGTGGCTGGGGAGGCCGGGGTGAATGGGGTGGCTGGGGAGGCCGGGGTGAATGGGTGGCTGGAGAGGCCGGGGTGACTGGGTGGCTGGGGAGGCCGGGGAGGCTGGGGTGACTGGGGAGGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9390:HG3_PB_SVrefine2Falcon1Dovetail_3436;NumClusterSVs=2;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9390;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00962117;ClusterMaxSizeDiff=0.00841852;ClusterMaxEditDist=0.0240529;PBcalls=2;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=827;DistBack=3224;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=551;REFWIDENED=5:3392195-3392745;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.9857;PctRecOverlap=0.447;SizeDiff=-12;StartDistance=-458;EndDistance=-458;GTMatch=0;TruScore=79;MatchId=4301.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:./.:9:24:17:2:./.:7:0:6:2:./.:6:0:0/1:13:14:.:963:.
chr5	3728193	HG3_Ill_Krunchall_7627	A	ACTCATATGCCCAAACACACACTCATATGCTCACACACAAACACACTTATACTCTAGCACACACACT	20	PASS	ClusterIDs=HG3_PB_pbsv_5392:HG4_Ill_scalpel_5248:HG2_PB_PB10Xdip_23998:HG2_PB_PB10Xdip_23997:HG4_Ill_GATKHC_9188:HG4_Ill_GATKHCSBGrefine_3906:HG3_Ill_scalpel_5441:HG3_Ill_manta_1276:HG3_Ill_Krunchall_7627:HG3_Ill_GATKHC_9105:HG3_Ill_GATKHCSBGrefine_3687:HG2_Ill_scalpel_5347:HG2_Ill_Krunchall_7767:HG2_Ill_GATKHC_9099:HG2_Ill_GATKHCSBGrefine_3749:HG3_PB_HySA_8446:HG4_PB_HySA_8213:HG2_PB_HySA_10227:HG2_PB_pbsv_5546;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3749:HG2_Ill_GATKHC_9099:HG2_Ill_Krunchall_7767:HG2_Ill_scalpel_5347:HG3_Ill_GATKHCSBGrefine_3687:HG3_Ill_GATKHC_9105:HG3_Ill_Krunchall_7627:HG3_Ill_manta_1276:HG3_Ill_scalpel_5441:HG4_Ill_GATKHCSBGrefine_3906:HG4_Ill_GATKHC_9188:HG4_Ill_scalpel_5248;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0882353;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.228571;PBcalls=7;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=130;REFWIDENED=5:3728145-3728274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4302.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:66:1/1:2:34:3:31:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr5	3995182	HG2_10X_SVrefine210Xhap12_3986	T	TAGAAAACGACAGAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGCCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3537:HG4_PB_HySA_8215:HG2_PB_pbsv_5548:HG4_PB_pbsv_5573:HG3_PB_pbsv_5394:HG2_PB_PB10Xdip_24029:HG4_PB_assemblyticsfalcon_20450:HG3_PB_assemblyticsfalcon_20857:HG2_PB_PB10Xdip_24030:HG3_PB_HySA_8448:HG4_PB_SVrefine2Falcon1Dovetail_3375:HG2_PB_SVrefine2PB10Xhap12_4017:HG2_PB_SVrefine2Falcon2Bionano_2727:HG4_Ill_MetaSV_4058:HG4_Ill_GATKHCSBGrefine_3907:HG3_PB_SVrefine2PBcRDovetail_2555:HG3_PB_SVrefine2Falcon1Dovetail_3444:HG3_Ill_SVrefine2DISCOVARDovetail_4195:HG3_Ill_MetaSV_4068:HG3_Ill_GATKHCSBGrefine_3688:HG2_PB_SVrefine2PBcRplusDovetail_8743:HG2_PB_SVrefine2Falcon1plusDovetail_9397:HG2_Ill_SVrefine2DISCOVARplusDovetail_10136:HG2_10X_SVrefine210Xhap12_3986:HG4_PB_SVrefine2PBcRDovetail_2813:HG2_PB_HySA_10229;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3986:HG2_Ill_SVrefine2DISCOVARplusDovetail_10136:HG2_PB_SVrefine2Falcon1plusDovetail_9397:HG2_PB_SVrefine2PBcRplusDovetail_8743:HG3_Ill_GATKHCSBGrefine_3688:HG3_Ill_MetaSV_4068:HG3_Ill_SVrefine2DISCOVARDovetail_4195:HG3_PB_SVrefine2Falcon1Dovetail_3444:HG3_PB_SVrefine2PBcRDovetail_2555:HG4_Ill_GATKHCSBGrefine_3907:HG4_Ill_MetaSV_4058;NumExactMatchSVs=11;ClusterMaxShiftDist=0.142195;ClusterMaxSizeDiff=0.142195;ClusterMaxEditDist=0.241113;PBcalls=18;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=324;DistBack=19591;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=5:3995183-3995199;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4303.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:29:0:16:./.:0:0:0:0:1/1:0:19:1/1:2:70:.:.:.
chr5	4015225	HG4_Ill_150bpfermikitraw_7338	C	CATATATATATATATATATATATATATATATATATATATATATATCTCATATATATCTCATAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7103:HG4_PB_pbsv_5574:HG4_Ill_manta_1354:HG4_Ill_Krunchall_8045:HG4_Ill_GATKHCSBGrefine_3908:HG4_Ill_250bpfermikitraw_7659:HG4_Ill_150bpfermikitraw_7338:HG3_Ill_manta_1277:HG3_Ill_Spiral_5993:HG3_Ill_GATKHCSBGrefine_3689:HG3_Ill_150bpfermikitraw_7165:HG2_Ill_manta_1553:HG2_Ill_GATKHCSBGrefine_3750;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7103:HG4_Ill_manta_1354:HG4_Ill_Krunchall_8045:HG4_Ill_GATKHCSBGrefine_3908:HG4_Ill_250bpfermikitraw_7659:HG4_Ill_150bpfermikitraw_7338:HG3_Ill_manta_1277:HG3_Ill_Spiral_5993:HG3_Ill_GATKHCSBGrefine_3689:HG3_Ill_150bpfermikitraw_7165:HG2_Ill_manta_1553:HG2_Ill_GATKHCSBGrefine_3750;NumExactMatchSVs=12;ClusterMaxShiftDist=0.106061;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.121212;PBcalls=1;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=5702;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=10;REFWIDENED=5:4015224-4015236;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4304.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:31:./.:20:14:10:15:./.:0:0:0:0:0/1:23:11:./.:.:.:.:.:.
chr5	5132429	HG2_Ill_150bpfermikitraw_7116	A	ATCCATACACACACATTTGCATTACACAACTGCTTTACATTACAGATAGACG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3993:HG3_PB_pbsv_5397:HG4_Ill_svaba_7161:HG4_PB_pbsv_5581:HG4_PB_HySA_8225:HG2_PB_HySA_10241:HG4_Ill_scalpel_5256:HG4_Ill_manta_1356:HG4_Ill_Krunchall_8056:HG4_Ill_GATKHC_9202:HG4_Ill_GATKHCSBGrefine_3910:HG4_Ill_250bpfermikitraw_7678:HG4_Ill_150bpfermikitraw_7352:HG3_Ill_svaba_7138:HG3_Ill_manta_1279:HG3_Ill_Spiral_6000:HG3_Ill_Krunchall_7634:HG3_Ill_GATKHC_9114:HG3_Ill_GATKHCSBGrefine_3691:HG3_Ill_250bpfermikitraw_7356:HG3_Ill_150bpfermikitraw_7175:HG2_Ill_svaba_7032:HG2_Ill_manta_1557:HG2_Ill_SpiralSDKrefine_13251:HG2_Ill_Krunchall_7780:HG2_Ill_GATKHC_9113:HG2_Ill_GATKHCSBGrefine_3752:HG2_Ill_250bpfermikitraw_7630:HG2_Ill_150bpfermikitraw_7116:HG2_Ill_breakscan11_3538:HG4_PB_SVrefine2PBcRDovetail_2817:HG4_Ill_SVrefine2DISCOVARDovetail_4107:HG3_PB_SVrefine2PBcRDovetail_2557:HG2_Ill_SVrefine2DISCOVARplusDovetail_10141;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7116:HG2_Ill_250bpfermikitraw_7630:HG2_Ill_GATKHCSBGrefine_3752:HG2_Ill_GATKHC_9113:HG2_Ill_Krunchall_7780:HG2_Ill_SpiralSDKrefine_13251:HG2_Ill_manta_1557:HG2_Ill_svaba_7032:HG3_Ill_150bpfermikitraw_7175:HG3_Ill_250bpfermikitraw_7356:HG3_Ill_GATKHCSBGrefine_3691:HG3_Ill_GATKHC_9114:HG3_Ill_Krunchall_7634:HG3_Ill_Spiral_6000:HG3_Ill_manta_1279:HG3_Ill_svaba_7138:HG4_Ill_150bpfermikitraw_7352:HG4_Ill_250bpfermikitraw_7678:HG4_Ill_GATKHCSBGrefine_3910:HG4_Ill_GATKHC_9202:HG4_Ill_Krunchall_8056:HG4_Ill_manta_1356:HG4_Ill_scalpel_5256:HG4_Ill_svaba_7161;NumExactMatchSVs=24;ClusterMaxShiftDist=0.146789;ClusterMaxSizeDiff=0.12844;ClusterMaxEditDist=0.280702;PBcalls=6;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=51;DistBack=42415;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=151;REFWIDENED=5:5132406-5132556;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:27:./.:24:11:6:9:./.:0:0:0:0:0/1:25:22:./.:.:.:.:.:.
chr5	5279793	HG3_PB_assemblyticsfalcon_20868	T	TTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTCTCGCTGTCGCCCACGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGCCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTATCTTGGAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3539:HG4_PB_pbsv_5582:HG2_PB_pbsv_5552:HG3_PB_assemblyticsfalcon_20868:HG2_PB_SVrefine2Falcon1plusDovetail_9400:HG4_PB_assemblyticsfalcon_20462:HG3_PB_SVrefine2Falcon1Dovetail_3447:HG4_PB_SVrefine2Falcon1Dovetail_3379:HG2_PB_SVrefine2Falcon2Bionano_2730;NumClusterSVs=9;ExactMatchIDs=HG3_PB_assemblyticsfalcon_20868;NumExactMatchSVs=1;ClusterMaxShiftDist=0.137821;ClusterMaxSizeDiff=0.137821;ClusterMaxEditDist=0.217886;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=9;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=5:5279782-5279799;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9937;PctRecOverlap=0.959;SizeDiff=-2;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=98;MatchId=4306.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:34:1|0:5:20:33:8:./.:0:0:0:0:0/1:25:15:0/1:6:38:.:.:.
chr5	5595240	HG3_Ill_GATKHCSBGrefine_3692	A	AGACTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGCGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_pbsv_5398:HG3_Ill_MetaSV_4069:HG2_PB_pbsv_5553:HG4_PB_assemblyticsfalcon_20463:HG3_PB_assemblyticsfalcon_20869:HG2_Ill_breakscan11_3540:HG2_PB_PB10Xdip_24106:HG4_Ill_MetaSV_4059:HG4_PB_pbsv_5583:HG2_Ill_MetaSV_3886:HG2_PB_SVrefine2Falcon2Bionano_2731:HG2_Ill_GATKHCSBGrefine_3753:HG2_PB_SVrefine2Falcon1plusDovetail_9401:HG2_PB_SVrefine2PB10Xhap12_4022:HG2_PB_SVrefine2PBcRplusDovetail_8746:HG2_PB_HySA_10243:HG4_PB_SVrefine2Falcon1Dovetail_3380:HG3_PB_SVrefine2Falcon1Dovetail_3448:HG3_Ill_GATKHCSBGrefine_3692:HG4_PB_HySA_8227;NumClusterSVs=20;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_3692:HG3_Ill_MetaSV_4069;NumExactMatchSVs=2;ClusterMaxShiftDist=0.170284;ClusterMaxSizeDiff=0.170284;ClusterMaxEditDist=0.370943;PBcalls=14;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=299;DistBack=33973;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=5:5595241-5595248;PctSeqSimilarity=0.9692;PctSizeSimilarity=0.9462;PctRecOverlap=0.9432;SizeDiff=-17;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4307.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:54:0|1:39:3:1:45:./.:0:0:0:0:0/1:30:7:0/1:6:23:.:.:.
chr5	5810659	HG3_Ill_manta_1280	T	TTTCCCTTAGTTCTGTCTCTTTAGAGAACCCTAATACAGACCTTGTGATCGTTTGAGTTAATACTGAATAAACTCCCCATATATATATATATATATATATATATATATATATATATATATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2733:HG2_PB_pbsv_5556:HG2_Ill_breakscan11_3541:HG2_PB_PB10Xdip_24126:HG4_PB_pbsv_5586:HG2_PB_PB10Xdip_24125:HG3_PB_pbsv_5401:HG4_Ill_manta_1357:HG3_Ill_manta_1280:HG3_Ill_Spiral_6002:HG3_Ill_MetaSV_4070:HG3_Ill_GATKHCSBGrefine_3693:HG2_Ill_GATKHCSBGrefine_3755:HG4_Ill_MetaSV_4060:HG4_Ill_GATKHC_9205:HG4_Ill_GATKHCSBGrefine_3912:HG4_PB_HySA_8229:HG4_PB_SVrefine2PBcRDovetail_2818:HG4_PB_SVrefine2Falcon1Dovetail_3382:HG4_Ill_SVrefine2DISCOVARDovetail_4110:HG3_Ill_SVrefine2DISCOVARDovetail_4202:HG2_Ill_SVrefine2DISCOVARplusDovetail_10143:HG2_10X_SVrefine210Xhap12_3996:HG3_PB_SVrefine2Falcon1Dovetail_3450:HG2_PB_SVrefine2PBcRplusDovetail_8748:HG2_PB_SVrefine2PB10Xhap12_4024:HG3_PB_SVrefine2PBcRDovetail_2560:HG2_PB_SVrefine2Falcon1plusDovetail_9403;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3755:HG3_Ill_GATKHCSBGrefine_3693:HG3_Ill_MetaSV_4070:HG3_Ill_Spiral_6002:HG3_Ill_manta_1280:HG4_Ill_manta_1357;NumExactMatchSVs=6;ClusterMaxShiftDist=0.15748;ClusterMaxSizeDiff=0.141732;ClusterMaxEditDist=0.293233;PBcalls=14;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=120;DistBack=-31;DistForward=3929;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=75;REFWIDENED=5:5810616-5810690;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4308.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:1:27:1:27:./.:0:0:0:0:1/1:0:19:./.:.:.:.:.:.
chr5	5931014	HG2_Ill_SVrefine2DISCOVARplusDovetail_10145	T	TACATGTGTATCACCACAAGTCTGTATAATACATGCCTGAATGTGTGCATGGATACACATTGAATATATGCATAACATATGTGTCATCGCAAGTCTGCATAATGCATGCCTGAATGTGTGCATGGATACACGCCTGCATATATGCATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9404:HG3_PB_HySA_8458:HG4_PB_pbsv_5587:HG2_10X_SVrefine210Xhap12_3997:HG2_PB_pbsv_5557:HG2_PB_PB10Xdip_24128:HG2_PB_PB10Xdip_24127:HG2_Ill_150bpfermikitraw_7123:HG3_PB_pbsv_5403:HG2_PB_HySA_10250:HG4_PB_HySA_8233:HG4_PB_SVrefine2PBcRDovetail_2819:HG4_PB_SVrefine2Falcon1Dovetail_3383:HG4_Ill_SVrefine2DISCOVARDovetail_4112:HG3_PB_SVrefine2Falcon1Dovetail_3451:HG2_PB_SVrefine2PBcRplusDovetail_8749:HG2_PB_SVrefine2PB10Xhap12_4025:HG2_PB_SVrefine2Falcon2Bionano_2734:HG2_Ill_SVrefine2DISCOVARplusDovetail_10145;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10145:HG2_PB_SVrefine2Falcon2Bionano_2734:HG2_PB_SVrefine2PB10Xhap12_4025:HG2_PB_SVrefine2PBcRplusDovetail_8749:HG3_PB_SVrefine2Falcon1Dovetail_3451:HG4_Ill_SVrefine2DISCOVARDovetail_4112:HG4_PB_SVrefine2Falcon1Dovetail_3383:HG4_PB_SVrefine2PBcRDovetail_2819;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0993377;ClusterMaxSizeDiff=0.0990099;ClusterMaxEditDist=0.298013;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=147;DistBack=5860;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=297;REFWIDENED=5:5931015-5931311;PctSeqSimilarity=0.9735;PctSizeSimilarity=0.9932;PctRecOverlap=0.3423;SizeDiff=-1;StartDistance=-97;EndDistance=-97;GTMatch=0;TruScore=76;MatchId=4309.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:76:1/1:3:33:3:21:./.:0:0:0:0:./.:27:3:./.:.:.:.:.:.
chr5	6284519	HG2_PB_SVrefine2PB10Xhap12_4028	T	TGTATTCAAACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGTCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3542:HG2_PB_pbsv_5562:HG4_PB_pbsv_5593:HG4_PB_assemblyticsfalcon_20475:HG3_PB_assemblyticsfalcon_20879:HG3_PB_HySA_8470:HG3_PB_pbsv_5407:HG2_PB_SVrefine2Falcon2Bionano_2737:HG3_PB_SVrefine2PBcRDovetail_2561:HG4_PB_SVrefine2Falcon1Dovetail_3387:HG2_PB_SVrefine2PBcRplusDovetail_8753:HG2_PB_SVrefine2PB10Xhap12_4028:HG2_PB_SVrefine2Falcon1plusDovetail_9408:HG3_PB_SVrefine2Falcon1Dovetail_3454:HG2_10X_SVrefine210Xhap12_3998:HG2_PB_HySA_10261:HG4_PB_HySA_8238:HG2_PB_PB10Xdip_24135:HG2_PB_PB10Xdip_24134;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4028:HG2_PB_SVrefine2PBcRplusDovetail_8753:HG4_PB_SVrefine2Falcon1Dovetail_3387;NumExactMatchSVs=3;ClusterMaxShiftDist=0.213376;ClusterMaxSizeDiff=0.210191;ClusterMaxEditDist=0.245223;PBcalls=17;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=329;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:6284520-6284535;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.991;PctRecOverlap=0.988;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4310.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:83:1/1:0:17:0:30:./.:0:0:0:0:1/1:0:18:1/1:3:63:.:.:.
chr5	6322320	HG3_Ill_GATKHC_9123	A	AGCACTATTTCACAGTAGGAGCACAGTCTTGCAGTGGGAGCACTATTTGACAGTTGGAGCACAGTCTCACAGTGGGAGCACTATTTCACAGTAGGAACACAGTCTTGCAGTGGGAGCACTATTTGACAGTTGGAGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3388:HG4_Ill_SVrefine2DISCOVARDovetail_4113:HG2_Ill_SVrefine2DISCOVARplusDovetail_10146:HG3_PB_SVrefine2Falcon1Dovetail_3456:HG4_PB_SVrefine2PBcRDovetail_2823:HG4_Ill_GATKHC_9214:HG3_Ill_GATKHC_9123:HG3_Ill_GATKHCSBGrefine_3700:HG2_PB_SVrefine2Falcon1plusDovetail_9409:HG4_PB_HySA_8240:HG4_PB_pbsv_5595;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_3700:HG3_Ill_GATKHC_9123:HG4_Ill_GATKHC_9214;NumExactMatchSVs=3;ClusterMaxShiftDist=0.156028;ClusterMaxSizeDiff=0.156028;ClusterMaxEditDist=0.270833;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=135;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=686;REFWIDENED=5:6322218-6322903;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4311.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:34:0|1:33:10:0:19:./.:0:0:0:0:0/1:18:15:./.:.:.:.:.:.
chr5	6448735	HG2_PB_SVrefine2PBcRplusDovetail_8754	G	TGCAGAGCAGGATGCTTCCTGCAAACATGGAAGCTTCGCGGTTCCCAGTCCTTCCAGCTCCTGGGGATCTAAACTTGGTTTTTGCTTGAAATTTCGCCAGATTAAAAAAAGAGGAAGAGAGAGTTTAATGGGTTCAAGGAAGAAAGGGAGGCGCGGATGCGAGCATCCCAGTGGAAGGCAGACCGATCCCGTGCCGGGGGCACTCCGGGGTCCGCAGAGGGGGTGCCCTGTCCCTGAGCCCCGACAGCCCGCGCTGGGCGCGCTTTTCCGCAGCCTTCAGAAAGGAGTCACCAGGCAGCGCTCCGCGGGCCCCTCCTCCCGGGACCCCTCTTGGGAACCCGGAGGCCCTCGGCGCGGCAGGCGCAAGGGGAGCGGGGTCGGCGAGGAGGGGTGAACTGGCGAAACAAAGTCGTGACTCAGGGGGCTTCTCTTCGGGGATCGCGGCGGGCACGCTCCGGGCATCCCACTCCCCGGCCCCGATTCTTGGATCGGTCCTCAAGAAAGCGGCCCCCGCGGGCCCCGAGCTGTGCGGAAAGGCCAGGCTCCTTCCGACCCGAAGGCATCTATAGGCTGCCTCCCAACCTTACCCAGATCGCGCTAACGGGGTTAAGTGGGGTCTGAGGCTCGGGCTGGGGGCCGCGGCGACCTGAGATCAGGGCAGGAGGGCCCCGTGCCTGAGACCCCCGGCGAGAGCGCCAGGCTCACCCCCAGCGCCCCGCCCCCGCCCGGCTTCCCCGGCCTGGCCTGCGCCCCCAGCAGCCCCCAGCCCGGCCGGCCCGGCGCGCACCGCGGTCTCCCCCAAGCGGCCGCGCGCGTGTCGCCGCGGGAGCGGGCGGCGGGGGCGGCTCGGCGCAGGCAAGCCGGCGGCTCCGCCCCGCGCCCCCCCTCCCGGCCAGCAGGGCCGCCCCCTACGCGCCTAGCTCGGCTCAGACGGAGCAGCCGCCTCTGCAATGTCAGCAGCCGCAGCGGCGGCGGCGACGCGAGCGGCAGCAGCCCGGGCCCCGCGGTAGCCGCCAGCGCGGCACGGCCAGCAGGAGCGCCAGGCGCGAGCCCGCGGCCACTCGCTGCCTCCGGGGCACTGCGAGAGGCTTTGCGCTCCCCAGCGCGGCGTTCGGACTCGGGGCCAGCGCGGCCACGGCCGCGCACAAAGGACAGCAGACGCCGGGACTCGGGGGCTGTGCCCAGGGACCGGCCCGGGGACCCCCGCCCGCGCCGCGTCCCCTCCACGCCTCCCCTCCCCGGGCGGCCGGAGCGCGAGCCGGAGCGGGCCCCGTCATATGACAGCGGCGACGCCGCAGCCGGCGAGCGCGCGTGCTGCCTGCTCCGCTGCGCCACGGCCGCCGGCGCCTGGGGTGGCCCTTGCCTCGCCCCGCTGAGCGGTCGCCCGTCGCCGCCGCCCCGCGCCCCCCGCGCCCGGGCTTGCGGGCTCCGGGGGAGGAGCCGAGGGGAGCCCCCAGCCGGCGCCGAGCCTAAAATGGCCACTCTGCTGCGGAAGATCGGGCTCATCCGCCTGCATAACCGGGACACCGAGGACCCCAAGCACCACCACAACCACCGCGGCGGCGGCCAGCAGAGCGCGTCTCTGCGCGGCAAGGGCGGCGCCAAGAGCGGCGGCCACAAGCAACAGCAGCAGCTGCA	20	PASS	ClusterIDs=HG4_PB_pbsv_5596:HG2_PB_pbsv_5565:HG4_PB_assemblyticsfalcon_20478:HG3_PB_pbsv_5409:HG3_PB_assemblyticsfalcon_20881:HG3_PB_SVrefine2PBcRDovetail_2563:HG2_PB_SVrefine2Falcon1plusDovetail_9410:HG4_Ill_SVrefine2DISCOVARDovetail_4115:HG2_PB_SVrefine2PBcRplusDovetail_8754:HG2_PB_SVrefine2PB10Xhap12_4029:HG2_Ill_SVrefine2DISCOVARplusDovetail_10147:HG3_Ill_SVrefine2DISCOVARDovetail_4207:HG4_PB_SVrefine2PBcRDovetail_2824:HG4_PB_SVrefine2Falcon1Dovetail_3389:HG3_PB_SVrefine2Falcon1Dovetail_3457:HG2_PB_SVrefine2Falcon2Bionano_2738:HG4_PB_HySA_8242:HG2_Ill_breakscan11_3543:HG2_PB_PB10Xdip_24137:HG2_PB_PB10Xdip_24136;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10147:HG2_PB_SVrefine2PB10Xhap12_4029:HG2_PB_SVrefine2PBcRplusDovetail_8754:HG4_Ill_SVrefine2DISCOVARDovetail_4115;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0712112;ClusterMaxSizeDiff=0.0529358;ClusterMaxEditDist=0.26902;PBcalls=16;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=1637;DistBack=1111;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:6448736-6448734;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:111:1/1:0:17:0:12:./.:0:0:0:0:1/1:1:9:./.:14:128:.:1499:.
chr5	6868849	HG2_10X_SVrefine210Xhap12_4003	T	TGGCTGCTTTTATTTCCACAGGGTTATTCCCGTCAAGCCCTGATCCTGGTTGTGGTGCCACAGCCTTGCAGGCATTGATGAGGGGGCTCTGCCCTGGGGCTGGCTGAAGAGGACCCCTGAGACTGACCCAGCACCGAGCCTCTTGTGTTTCAGTGGGGGCTGCCAGGAGAGCTGGCCCAGGGTCCAGAGGGGCTCCTGGTACTCTCAGGACCCTCAGCCAGGGTATAGGGATCCCTGGCTTTGCAGAGGTCACCCGTCTGACAGACTTTCTCATTTTCCAGGGCTGGGAGAAACCTTTGGCCTATCAGTGTTTTAGTTCCTTCCAATGAGTTTATGTTGCATCTTATTTATAGCACGTTTTGAAAATTTTTTTTTGATGAACAGTTTTAAGGAAAAAAACCAAAGGAAGTTAGAGGGCTCCATTGTGCCTTAAGTATTTTGGACATTTGTGGTCTACAATAGACTCAAGTGGAGAAGTTTTGCTTTCCCCACCATGACCATTAACTTCATACCTAATGTAGAGTGTTTGCTGTCTTTTACCTTAAATTATGCCACAGAATATCATTTTTTAAAGAGCTAAACAGTATGTGTACCTCAACTGGAATAATCAACAGGATTGTATAGGACAGTCTGGATTGAGGCTTCAAATGCCTGATTTGGGGAAACAGACCAGTTCTCCTTGTCGCATCACTTCTGCGAGGAGAACTGCCTGACATGGCAGGAGCTGTAATTCCTGGGCCTCCATTTAAACCTCATGAAATGGCTCTTGTGCTTCCAGTGCCCCTTTCGGTGGGTCCCCAATGTACTAGCAGACTTACCTGGGCAGGGTCTTTGACGGAGACATGGCCCCAGAAGAGGTAGTAAGCCCTGACTGCAGGAGGTAGGCACGGCACCTGTGATGAGAGAGACTGGGCTTCCTGTGCGGAAACCACTGTCTACAAAGAACTGCATGCACAAAAGTCAGAGCAGACAGGTGCAGAAGTCACATTGTTCAGAGATAACTGGAGCACGTGGCAGTCTCTCACTGTGTTCTGAGGTAGTTTCTTATGCTAAAAAATGTGGAGTCTTTATGGGGTCCTAGCTTTTCTTCCCCCACACCTAGGTTGCCATGAACATATTCTCTTTTCAGAATCCCCTGGAATTGTCTTTATGCAAAAGGGCTTATCCTTCCCTCCCTCCCCCTCTCCCTCTTTCTTTCTTCCTCACTGTTAAAATCATGGCACTCCTCTTGTAGGAAATCTTACTCCTTTCTAAACTGCGCCTTAATTAAAACTAAGCTTTTCAGCCACACTCTTTAAGGCTGTTCATTAATCACACACTGCATACATAGTTCAAGGGTTTTGCTGACTCATCCCCTGCCATG	20	PASS	ClusterIDs=HG3_Ill_Spiral_6011:HG3_PB_pbsv_5413:HG4_Ill_Spiral_454:HG4_PB_HySA_8245:HG3_PB_SVrefine2PBcRDovetail_2566:HG3_PB_SVrefine2Falcon1Dovetail_3462:HG4_PB_SVrefine2PBcRDovetail_2825:HG4_Ill_SVrefine2DISCOVARDovetail_4118:HG4_Ill_GATKHCSBGrefine_3919:HG2_PB_SVrefine2PBcRplusDovetail_8759:HG2_PB_SVrefine2PB10Xhap12_4037:HG2_10X_SVrefine210Xhap12_4003:HG4_PB_SVrefine2Falcon1Dovetail_3395:HG3_Ill_SVrefine2DISCOVARDovetail_4210:HG2_PB_SVrefine2Falcon2Bionano_2743:HG2_Ill_SVrefine2DISCOVARplusDovetail_10149:HG2_PB_SVrefine2Falcon1plusDovetail_9416:HG2_PB_pbsv_5571:HG2_PB_PB10Xdip_24239:HG2_PB_PB10Xdip_24238;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4003:HG2_PB_SVrefine2PB10Xhap12_4037:HG2_PB_SVrefine2PBcRplusDovetail_8759:HG4_Ill_GATKHCSBGrefine_3919:HG4_Ill_SVrefine2DISCOVARDovetail_4118:HG4_PB_SVrefine2PBcRDovetail_2825;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0367965;ClusterMaxSizeDiff=0.036075;ClusterMaxEditDist=0.171265;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1362;DistBack=27519;DistForward=58;DistMin=58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=5:6868850-6868853;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4313.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:144:1/1:0:40:0:32:./.:0:0:0:0:1/1:0:40:./.:12:118:.:1421:.
chr5	7262699	HG2_PB_HySA_10285	T	TAATTTTCCTTTATCTCACTCAAATCCTATAAAAATGGCCCCGCCCCATCTCCCTTCACTGACTCTGTTTTTCAGACTCAGCCCACCTGCACCCAGGTGATTAAAAGCTTTTATTGCTCACACAAAGCCTGTTTGATGGCCTCTCCACAGGGAGGTGCATGAAATTTGGTGCCATGACTCGGATCGGGGGACCTCCCTTGGGAGATGAATCCCCTGTCCTCCTGCTCTTTGCTCCATGAGAAAGGTCCACCTACGACCTCAAGTCCTCAGACCGACCAGCCCAAGAAACATCTCACCAATTTCAAATCCGGTAAGAGGCCTCTTTTTAGTCTCTTATCCAGCCTCCCTCATTATCCCTCAACCTCTTTTCTCCTTTCAATCTTGGCACCACACTTCAATCTCTCCCTTCTCTTAATTTCAATTCCTTTCATTTTCTGGGTAGAGATAAAGGAGACACATTTTATCCGTGGACCCAAAACTCCGGCGCTGGTTACGGACTAGGGAAGGCAGCCTTCCCTTGGTGTTTAATCATTGCAGGGACACCTCTCTGATTATTCACCCAGGTTTCAGAGGTGTCAGACCATGCAGGGATGCCTGCCTTGGTCTTTCACCCTCAGCGGCAAGTTCCCGCTTTTTCTTGGGGAGGGGCAAGTACCCCAACCCCTTCTCTCTGTGTCTCTACCCCTTCTCCGCCTTTCTGGGGGGCAAGAAACCCCCAACCCCTTCTCCTTCACACTTAGTGGCAAGTCCCGCTTTTCTGGGGGAGGGGCAAGTACCCCAACCTCGTATCTCTGTGCCCCAATCCCTTATTTCTGCGTTCCGACCTCTTATGTCTCTGTGCCCCGATCCCTTATTTCCACGTCCCAACCTCTTATATCTCTGCACCCTGATCCCTTATTTCCATGCCATGACCTCGTATCTCTGTGCCCCGACCCCTTTCCCACTTTTTCTGGAGGGTAAGAACCCCCGAACCGCTTCCCTCCGTGTCTCTGCTGTCCCTTTTTCTTTAAACTTGCCTCCTTCACTATAGGCAAACTTCCACCCTCCATTCCTCCTTATTCTCCCTTGCCTGTGTTCTTAAGAACATAAAACCTCTTCAACTCTCACCTGACCTAAAACCTAAATGCCTTATTTTCTTCTACAATGCCGCGTGACCCAATACAAACTCGACAGTGGTTCTATAAACGGCCAGAAAGTGGCACTTTCCATTTCTCCATCCTACAAGACCTAAATAATTTTTGTCAAAAAAATAGGTAAATGGTCTGAGGTGCCTGACGTCCAGGCATTCTTTTACACATCAGTCCTCCCTAGTCTCTGTGCCCAGTGCAACTCATCCCAAATCTTCCTTCTTTCCCTCCCGCCTGTCCCCTCAGTCCCAACCCCAAGCGTTGCTGAGTCTTTCTTATCTTCCTTTTCTACAGACCCATCTGACCTCTCCCCTCCTCCCCAGGCTGCTCCTCGCCAGGCTGAGCTAGGACCCAATTCTTCCTCGGCCTCCGCTCCTCTACCCTATAATCTTTTTATCACCTCCCCTCCTCACACCCGGTCTGGTTTACAGTTTCATTCCGTGAGTAGCCCTCCTCCATCTGCCCAGCAATTTCCTCTTAAAAAGGTGGCTGGGAGCCACAGGCGTAGTCAAGGTTAATGCTCCTTTTCCTTTATCCCAAATCAGATAGCGTTTTAGGCTCTTTTTCATCAAATATGAAAAACCCCACCCCAGTTCATGGCTCGTTCGGCAGCAACCCTGAGACGCTTTACAGCCCTAGACCCTAAAAGGTCAAAAGGTCGTCTTTATTCTCAATATACATTTTATTACCCAATCTGCTCCCAACATTAAATAAAACTCCAAAAATTAAATTCTGGCCCTCAAACCCCACAACAGGACTTAATTAACCTCACCTTCAAGGTGTACAATTAATAGAGTAGAGGCAGCCAAGTAGCAACATATTTCTGAGTTGCGATTTCTTTGCCTCTACTGTGAGACAAACCCCAGCTACATCTCCAGCACACAAGAACTTCCAAACGCCTGAACCGCAGCTGCCAGGGGTTTCTCCAGAACCTCCTCCCCCAGGAGCTTGCTACAAGTGCTGGAAATCTGGCCACTGGGCCAAGGAATGCCCACAGCCCAAGATTCTTCCTAAGCCATGTCCCATCTGTGTGGGACCCCACTGAAAATTGGACTGTTCAACTCACCTGGCAGCCACTTCCAGAGGCCCTGGAACTCTGGCCCAAGGCTCTCTGACTGACTTCTCTCCCAGATCTTCTTGGCTTAACAGCTGAAGACTGACACTGCCCGATTGCCTCAGAAGCCTACAGGACCATCACAGACGCTCTAGGAAACTCTCACAGTGGAAGGTAAGTCCGTCCCCTTCTTAATACAGAGGCTACTCACTCACTCCACATTACCTTATTTTCAAGGGCCTGTCTCCCTTGCTTCCATAATTGTTGTGCATATTGACGGCCAGGCTTCTAAACCTCTTTAAACTCCCCAACTCTGGTGCCAACTTAGACAATACTCTTTTAAGCACTCCTTTTTAATTATCCCCACCTGCCCAGTTCCCTTATTAGGCCGAGACACTTTAAATTATCTGCTTCCCTGACTGTTCCTAGGCTACAGCCACACCTCATTGCCACCTTTTCCCGCCAGTTCAAAGCTTCCTTCACTTCCTCCCCTTGTATCTCCCCACCTTAACCCACAAGTATAAGACACCTCTACTCCCCCCTTAGTGACCAATCATGCACCCCTTACCATCCCATTAAAACCTAATCACTCTTACCCCGCTCAATGCCAATATCCCACCCCACAGCATGCTTTGAAAGGATTAAAGCCTGTTATCGCTCACCTGTTACAGTATGGCCTTTTAAAGCCTATAAACTCTTCTTACCATTCCCATTTTACCTGTCCTAAAACCAGACAAGGCTTACAGGTTAGTTCAGAATCTACGCCTTATCAACCAAATTGTTTTGCCTATCCACCCCGTGTTGCCAAAACCATATACTCTCTTATCCTCAATACCTCCCTCTACAACCCATTATTCTGTTCTGGATCTCAAACATGCTTTCTTTATTGCACCCTTCATCCCAGCCTCTCTTCCTTTCACTTAGACTGACCCTGACACCCATCAGGCTCAGCAAATTACCTGGGCTGTATTGCCGCAAGGCTTTGCAGATAGCCCCCATTACTTCAGTCAAGCCCAAATTTTCATCCTCATCTGTTACCTATCTCGGCATAATTCTCATAAAAACACACGTGCTCTCCCTGCTGATCGTGTCCATTTCATCTCCCAAACCTCAATCCCTTACAAAACAACAACTCCTTTCCTTCCTAGGCATGGTCAGTGTGGTCAGAATTCTTACACAAGAGCCAGGGCCGTACCCTGTAGCCTTTCTGTCCAAACAACTTGACCTTACTTTTTTAGCCTAGCCCTCATGTCTGCAAGTAGCAGCTGCCGCTGCTTTAATACTTTTAGAGGCCCTAAAAATCACAAACTACGCTCAACTCAATCTACATTTCTCATAACTTCCAAAATCCATTTTCTTCCTCATACCTGATGCATATACTTTCTGCTCCCCGGCTCCTTCAGCTGTAATCACTCTTTCTTAAGTCCCACAATTACCATTGTTCCTGGCCCAGACTTCAATCCGGCCTCCCTACATTATTCTGGATACCAACACCTGACCCCTCATGACTGTCTCTCTCTGATCCACCTGACATTCACCCCATTTCCCATATTTCCTTCTTTCCTGTTCCTCACCCTGATCACACTTGATTTATTGATGTCAGTTCCACTAGGCCTAATCGCCACACACACCAGCAAAGGCAGGCTATGCTATAGTACAAGCCACTAGCCCGCCTCTTAGAACCTCTTATTTCCTTTCCATCGTGGAAATCTAACCTCAAGGAAGTAACTCTCTCAGTGTTCCATCTGCTATTCTACTACTCCTCAGGGATTATTCAGGCCCCCTCCCTTCCATAACACATCAAGCTTGAAGATTTGCCCCCACCCAGGACTGGCAAATTAGCTTTACTCAACATGCCCTGAGTCAGATAGCTAAAATACCTCTTAGTCTAGGTAGACACTTCCACTGGATAGGTACAGGGTCTGAGAAGGCCACCACAGTCATTTCTTCCCTTCTGTCAGACATAATTCCTCAGTTTAGCCTTCCCACCTCTATACAGTCTGATAACAGACCAGCCTTCATTAGTCAAATCAGCCAAGCAGTTTTTCAGGCTCTTAGTATTCAGTGAAACCTTTATATCCCTTACGGTCCTCCGTCTTCAGGAAAAGTAGAACGGACTAAAGGTCTTTTAAAAAACACACCTCCCCAAGCTCAGCCACCAACTTAAAAAGGACTGGACAATACTTTTACCACTTTCCCTTCTCAGAAGTCAGACCTGCCCTCAGAATGCTACAGGATACAGCCCATTTGAGCTCCTGTATAGATGCTCCTTTTTATTAGGCCCCAGTCTCATTCCAGACACCACGAGACAACTTAGACTGTGCCCCAAAAAAATTGTCATCCCTACTATCTTCTGTCTAGTCATACTCCTATTCACCATTCTCAACTACTCATACATGCCCTGCTCTTGTTTACACTGCCGGTTTACACTGTTTTTCCAAGCCATCACAGCTGATATCTCCTGGTGCTATCCCCAAACTGCCACTCTTAACTCTTGAAGTAAATAAATAATCTTTGCTGAAAGGACTATGCTGAATCTCCTTAGGCACTCTCTAATTAGATGTCCTGGGTCCCTCCCAAATCTTAGACCTTTTATACCTGTTTTTCTCCTTCTGTTATTCCATTTAGTTTTTCAATTCATGCAAAACCATATCCAGCCATCACCAATCATTCTAAATGACAAATGTCTCTTCTAACAGTCCCACAATATCACCCCTTACACAAAATCTTCCTTCAGCTTAATCTCTCCCACTCTAGGTTCCCATGCCACCCCTAATCCCGCTCAAAGCAGCCTTGAGAAACATTGCTCATTATCTCTCCATACCACCCCCAAAAAATTTTCACCATCCCACACTTCACGCACTATTTCATTTTTCTTATTAATATAAGAAGACAGGAATATCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGTGACCTGCACGTACACATCCAGATGGCCGGTTCCTGCCTTAACTGATGATCATTCCACCACAAAAGAAGTGAAAATGGCCTGTTCCTGCCTTAACTGATGACATTGTCTTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAGCTCGCCTACTGAGCACCTTGTGACCCCCACTCTGCCTGCCAGAGAACAACCCCTTTGACTATA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3464:HG3_PB_HySA_8490:HG2_PB_HySA_10286:HG2_PB_HySA_10285:HG2_PB_HySA_10284:HG4_PB_HySA_8249:HG4_PB_HySA_8248:HG2_PB_PB10Xdip_24242:HG4_PB_SVrefine2PBcRDovetail_2826:HG2_10X_SVrefine210Xhap12_4007:HG3_PB_SVrefine2PBcRDovetail_2568:HG2_PB_SVrefine2Falcon2Bionano_2744:HG2_PB_SVrefine2PBcRplusDovetail_8761:HG2_PB_SVrefine2PB10Xhap12_4039:HG4_PB_SVrefine2Falcon1Dovetail_3397:HG2_PB_HySA_10283:HG3_PB_assemblyticsfalcon_20892;NumClusterSVs=17;ExactMatchIDs=HG2_PB_HySA_10285;NumExactMatchSVs=1;ClusterMaxShiftDist=0.187076;ClusterMaxSizeDiff=0.187076;ClusterMaxEditDist=0.21796;PBcalls=16;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=5330;DistBack=-156;DistForward=63;DistMin=-156;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=406;REFWIDENED=5:7262452-7262857;PctSeqSimilarity=0.9944;PctSizeSimilarity=0.9934;PctRecOverlap=0.9501;SizeDiff=35;StartDistance=248;EndDistance=248;GTMatch=0;TruScore=97;MatchId=4314.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:2:57:1/1:0:32:2:8:./.:0:0:0:0:0/1:34:14:1/1:22:563:.:5281:.
chr5	7846039	HG4_Ill_SVrefine2DISCOVARDovetail_4122	T	TGACACTCACATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGAGGTTTCACAGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_24316:HG4_PB_pbsv_5607:HG3_PB_assemblyticsfalcon_20899:HG2_PB_pbsv_5576:HG3_PB_SVrefine2Falcon1Dovetail_3467:HG2_PB_assemblyticsPBcR_20262:HG4_PB_SVrefine2PBcRDovetail_2828:HG4_Ill_SVrefine2DISCOVARDovetail_4122:HG4_Ill_MetaSV_4065:HG4_Ill_GATKHCSBGrefine_3922:HG2_Ill_MetaSV_3893:HG2_Ill_GATKHCSBGrefine_3764:HG2_10X_SVrefine210Xhap12_4010:HG2_PB_SVrefine2PB10Xhap12_4046:HG2_PB_SVrefine2PBcRplusDovetail_8765:HG4_PB_HySA_8257:HG2_PB_HySA_10296:HG2_PB_PB10Xdip_24317;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4010:HG2_Ill_GATKHCSBGrefine_3764:HG2_Ill_MetaSV_3893:HG4_Ill_GATKHCSBGrefine_3922:HG4_Ill_MetaSV_4065:HG4_Ill_SVrefine2DISCOVARDovetail_4122:HG4_PB_SVrefine2PBcRDovetail_2828;NumExactMatchSVs=7;ClusterMaxShiftDist=0.18241;ClusterMaxSizeDiff=0.18241;ClusterMaxEditDist=0.237785;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=313;DistBack=19358;DistForward=1530;DistMin=1530;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:7846040-7846053;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4315.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:50:./.:22:13:2:24:./.:0:0:0:0:0/1:21:13:0/1:7:18:.:.:.
chr5	9970850	HG2_PB_SVrefine2PB10Xhap12_4058	A	ACACAATAGAGTACTATTCAGCCCTGGAAAAGGATGAGATCCAGTCATTTGCAACAACGTGGATGGAACTGGAGATCATTACGTTAAGTGAAATAAGCCAGGCACAGGAAGATAAACATCCCATGTTCTCACTTACTTGTGGGATCTAAAAATTAAAGCATGAACTCATGGACACAGACTACAAGGACGGTTACCAGAGGCAAACTCCTTGAACACCAAGAGCAAGAGGGTTGCAGCAGCTGCAGTAAACAGGTGGGCTTGAGAGCCCTCGCTCCTGCCTCTGGGCGGTTGTGCCTGATCCCACAGCTCGCTCCCAGCAGAGGATGACTGCAGGAACCCACAGATGAGAGAAGAAAAGAACCAAGGGAATAAAACCTTCACCCTGATCCAGGGCCACATTTGCCCTTGTAATAGAATATTCAGAGGCAATCCGTGCCCAAACCCTTTACGGATATTTTTTAGAAAGTCAGGGATATAGACATCTCAAAGTTTATCAAAAATAAGACATACACCTCAGGGTAGGTCCTATGTTAATCACATGACTCATTCTGGAAAAGTGAGCTTGTCTCCAGGGGATATTTGAGGGTAACCCCAAATTCAACACAGACGATGAAGCACTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGAAAAATCCCATCTCTAATAAAAAATACAAAAATTAGCCAGGCACGGTGGCAAGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGGAAAACTGCTCAAACTCGGGAGGCGAAGGTTACAGTGAGCCGAGATCAGGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCATCTCAAAAAAAAATAAAAAAGGATGAAGCAGAGGTGAGTTTAAGTTAACAAGCACAAGCACAAGAGGCCAGCATCTCCGAGGCCAGCATCCTTGGGGGCTAGTTCCAACCATTCTAGGTACTTTGCAGGCACAGGGAAGAATAGCAAAAAAGGAAAGCAGAGTTTCTGGAGAAAATCTAATACTAAAGACTATTCTTAATGATGAATCACATAAGCAGAGACTGTAAAGCTCTGCAGTTAGTCAAGAGGGCCTTAAAAACAGAGGGAGCAGATCTCAGCCCAGAGGATGTGGAACACGGAAGAGGGTGAGCAGAACCTGGGTCAAGTGCAATCCAGTGTGGGTCACACCCACGGCCAGGCCTGAGGAGGAACAGAACCAGAGAGCACAACCGCTTGCATTGTGTATCTCAATAAATAAGTGCATGTAATCCTATACATCATATGCAACACAGGTGTATCAATATAGAGACGTATATGATACAGATGTATAGATGTATATGATATAGATGTATTAATATTACATTGTACTATATATTGTATTAATGCAATGTATAACATCAATCTGTATGCATAATACATATTACATATATACATAACTATATATTATCTGTATACATATTCATATATTACACATATTATTACATTATATGTTTGGATATAAATATCTATAGATCTCATTCCAGAATTCAGATCTAGTTGACTTCAACACATCCTTTGGGCACCTTCCAAAAGTGTTGGATGGAGACCCTGTTTGACTAGTGCAGAATGAAATAATGAGTGAGCCTGGCATAGGCCACGTGGCAAGGCTTCTGTCAGCCTGTGTCTGTGAGGTGACCCCCTGCTCTGTAGGTGGAAACAGGGGAAAGCCTTCATGGCTTCACTGGCCATTTGAGTTTGAAGCACTTAGTTTCCTTCAGCAGCATCCACAACAGCCAGTTTGCTGTCTGTAGAGTCCTGCCCACTTTGTGCATTTTCCAGGTGGGTTTCTCCAACCCTTCATCACACCAGACTTTTCTCTCTCGTTCCACTGAAGCCACGCCCCAGGAGTCAGATGAGATAGTGATGCCCTGACAAGACTTTGTCTTCCTGATGCTTCTGCTTACAGACGGCATGGTGCACACAGGATAAAGCCACACCAAGGTGGACATGGTCAGAGCAAATAAACTGCTGCCTGCTTTCACCCCAGGGAACATCTGACTTCCTACTGCTGACCCCCAGCTCACACCAACCAGAACTTGTAAGCCCCCTTGCAGCTACTGGGTCGAAACCAATCTCCAATGAATCTAAACCCCCATCCAATGACATGGGGAGAATGAGATGAAAGATCACTGTAGCAATACAAACTATACCTAGTTCAAAACTCTAAGAAGTGAAGAATTAAAAATATAGAAACTTCAAGAGAATGATTTTCCCCATCTTTACAATTTTCTACTAGTTGTTTTCCCGGAGCATAATTTTTCCACATAATTAAAAATGATGGCACAGCATATAGCCTGTAATCTCAGTAATGGAAAGGGTGTTATGTGTCTCTTGTTTAATAAATGCTATCAGATTTTTCCGGCACTGAAGAAACTCATTTTACTAAAACCAGCAGAAACCGCTTATATGATAAAGCTACTGGAACAGTTTCCCTTGGAAACATTTGTAATCTGCTGTATCAGGGATGGAGAGTTCCTATTAAAAATATATCAACACCCTCATAAAGACCATTTTCCCTGTGCAATTTATTCTGAGAAATAACATCCAAAATACAAATTTGTTGACAATCAATTTTTGCTTCTCCGTGCAATACAGTAGAAGAGTATCTGTTTCTTAATAGAATGGTTCACATACAAAATAACATTCAATTACCAGGTGCCATGACACTGCAAACTCTCCAGTGTCTCCTCTTGTGTGGTGACATATCTACATATCTGTCATTAGCTCTAAACCCTGGCCACAACAAGGACAGATTGTCTTGTGTGCATTAGAATTCCTCAATAGATTTCATTGACTTCAGTCGTGGATACTATAAATATTGAACCTCATCTCCATTGCGAAAAATGTCTCCTGTGTCTAGATGTGTAAAAAAGTCCCTTAGATGCTAATGAGGGGCACCCTTTTGATGTTTTTCATCAGAGAAAATATTGAAAGGTGAGTCTAGCAGCTTGCATAAACAAACTCAATGATTCAGATACCTGAGGCTATCTTGCTTTTAGTTCTGTAAGACTGCTAAGGTGGACAATTGTAATTATAGTTTTTTTTATCTTCCCACACTTTCCCTTTCCCCCATTACTTCCTGTAACAGAATCCCTTACAGGAAACGTCTTCCAATGGATGTGTTTAAGGCTGACCTCTTCCCCAGCCCTAGGGGAGGGGACATGACTCAGGTTTGATCAATCTGAGAAACACATACGCATGGTCAGAGTGATTACTTCAGGGACAGACACC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2835:HG2_Ill_breakscan11_3545:HG2_PB_HySA_10323:HG2_PB_pbsv_5585:HG2_PB_SVrefine2PBcRplusDovetail_8772:HG2_PB_SVrefine2PB10Xhap12_4058:HG2_PB_SVrefine2Falcon2Bionano_2756:HG2_Ill_SVrefine2DISCOVARplusDovetail_10161:HG2_10X_SVrefine210Xhap12_4024;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4024:HG2_Ill_SVrefine2DISCOVARplusDovetail_10161:HG2_PB_SVrefine2Falcon2Bionano_2756:HG2_PB_SVrefine2PB10Xhap12_4058:HG2_PB_SVrefine2PBcRplusDovetail_8772;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0545803;ClusterMaxSizeDiff=0.0504499;ClusterMaxEditDist=0.152161;PBcalls=6;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=3304;DistBack=8;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=5:9970851-9970853;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4317.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:60:0|1:52:5:1:25:./.:0:0:0:0:0/1:30:17:0/1:140:195:.:3290:.
chr5	10455894	HG3_Ill_250bpfermikitraw_7411	T	TAGAGGCTTTTAAAAACCAGTGCTGGGTCAGAGGCTTTTAAAAACCAGTGCTGGGTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4030:HG2_PB_PB10Xdip_22861:HG3_PB_pbsv_5431:HG4_Ill_manta_1374:HG2_PB_HySA_10335:HG4_Ill_Krunchall_8108:HG4_Ill_GATKHC_9266:HG4_Ill_GATKHCSBGrefine_3930:HG4_Ill_250bpfermikitraw_7735:HG4_Ill_150bpfermikitraw_7406:HG3_PB_assemblyticsfalcon_20932:HG3_Ill_Krunchall_7690:HG3_Ill_GATKHC_9171:HG3_Ill_GATKHCSBGrefine_3714:HG3_Ill_250bpfermikitraw_7411:HG3_Ill_150bpfermikitraw_7230:HG2_Ill_Krunchall_7842:HG2_Ill_GATKHC_9177:HG2_Ill_GATKHCSBGrefine_3830:HG2_Ill_250bpfermikitraw_7691:HG2_Ill_150bpfermikitraw_7178:HG3_PB_HySA_8526:HG2_PB_SVrefine2Falcon1plusDovetail_9428:HG3_PB_SVrefine2PBcRDovetail_2579:HG3_Ill_SVrefine2DISCOVARDovetail_4225:HG2_PB_SVrefine2PBcRplusDovetail_8776:HG2_PB_SVrefine2Falcon2Bionano_2759:HG2_Ill_SVrefine2DISCOVARplusDovetail_10165;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7178:HG2_Ill_250bpfermikitraw_7691:HG2_Ill_GATKHCSBGrefine_3830:HG2_Ill_GATKHC_9177:HG2_Ill_Krunchall_7842:HG3_Ill_150bpfermikitraw_7230:HG3_Ill_250bpfermikitraw_7411:HG3_Ill_GATKHCSBGrefine_3714:HG3_Ill_GATKHC_9171:HG3_Ill_Krunchall_7690:HG3_PB_assemblyticsfalcon_20932:HG4_Ill_150bpfermikitraw_7406:HG4_Ill_250bpfermikitraw_7735:HG4_Ill_GATKHCSBGrefine_3930:HG4_Ill_GATKHC_9266:HG4_Ill_Krunchall_8108:HG4_Ill_manta_1374;NumExactMatchSVs=17;ClusterMaxShiftDist=0.102564;ClusterMaxSizeDiff=0.0854701;ClusterMaxEditDist=0.254237;PBcalls=9;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=56;DistBack=11;DistForward=21;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=115;REFWIDENED=5:10455870-10455984;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:1:7:0:18:./.:0:0:0:0:./.:4:41:./.:.:.:.:.:.
chr5	10634980	HG3_Ill_GATKHCSBGrefine_3717	T	TAAAGAAGAAAGGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCCGAGGCGGGTGGATCAGGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_Ill_MetaSV_4071:HG4_PB_pbsv_5624:HG2_PB_HySA_10338:HG3_PB_pbsv_5433:HG3_PB_HySA_8530:HG2_PB_HySA_10337:HG2_Ill_MetaSV_3903:HG2_PB_pbsv_5593:HG4_Ill_GATKHCSBGrefine_3934:HG4_PB_SVrefine2Falcon1Dovetail_3413:HG3_Ill_MetaSV_4086:HG3_Ill_GATKHCSBGrefine_3717:HG2_PB_SVrefine2Falcon2Bionano_2760:HG2_Ill_GATKHCSBGrefine_3834;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3834:HG2_PB_SVrefine2Falcon2Bionano_2760:HG3_Ill_GATKHCSBGrefine_3717:HG3_Ill_MetaSV_4086:HG4_Ill_GATKHCSBGrefine_3934;NumExactMatchSVs=5;ClusterMaxShiftDist=0.152411;ClusterMaxSizeDiff=0.152411;ClusterMaxEditDist=0.260479;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=321;DistBack=41634;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:10634981-10634994;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4320.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:23:0|1:29:1:0:21:./.:0:0:0:0:0/1:27:8:0/1:11:29:.:.:.
chr5	10984648	HG2_Ill_manta_1577	T	TTTGTGGCTTCTGAGCCTAGGATGTTAATACTGGAAGTTCTTTCCCCTCACTCGTTTAA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_7694:HG3_PB_pbsv_5437:HG2_PB_HySA_10345:HG3_Ill_svaba_7197:HG2_PB_pbsv_5597:HG3_Ill_GATKHC_9178:HG3_Ill_GATKHCSBGrefine_3718:HG3_Ill_250bpfermikitraw_7414:HG2_Ill_svaba_7098:HG2_Ill_scalpel_5407:HG2_Ill_manta_1577:HG2_Ill_Krunchall_7846:HG2_Ill_GATKHC_9181:HG2_Ill_GATKHCSBGrefine_3838;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7694:HG3_Ill_svaba_7197:HG3_Ill_GATKHC_9178:HG3_Ill_GATKHCSBGrefine_3718:HG3_Ill_250bpfermikitraw_7414:HG2_Ill_svaba_7098:HG2_Ill_scalpel_5407:HG2_Ill_manta_1577:HG2_Ill_Krunchall_7846:HG2_Ill_GATKHC_9181:HG2_Ill_GATKHCSBGrefine_3838;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.333333;PBcalls=3;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=50088;DistForward=9695;DistMin=9695;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=5:10984649-10984706;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:40:0|1:20:5:8:34:./.:0:0:0:0:0/1:25:30:./.:.:.:.:.:.
chr5	11285981	HG2_PB_SVrefine2Falcon2Bionano_2765	G	GTTAAATCCAAAGTGATTTTTAAATACATTAACAATACACAGTGTAATATAAGTGTTAATAAGAGAGCATAGGTTAATAAGAGAGCAC	20	PASS	ClusterIDs=HG2_PB_HySA_10350:HG2_PB_pbsv_5601:HG4_PB_pbsv_5633:HG4_PB_HySA_8283:HG3_PB_pbsv_5442:HG3_PB_HySA_8546:HG4_Ill_svaba_7224:HG4_Ill_Krunchall_8118:HG4_Ill_GATKHC_9288:HG4_Ill_GATKHCSBGrefine_3944:HG4_Ill_250bpfermikitraw_7745:HG3_Ill_svaba_7202:HG3_Ill_SVrefine2DISCOVARDovetail_4232:HG3_Ill_Krunchall_7695:HG3_Ill_GATKHC_9182:HG3_Ill_GATKHCSBGrefine_3724:HG3_Ill_250bpfermikitraw_7417:HG2_PB_SVrefine2Falcon2Bionano_2765:HG2_PB_SVrefine2Falcon1plusDovetail_9432:HG2_Ill_svaba_7101:HG2_Ill_SVrefine2DISCOVARplusDovetail_10171:HG2_Ill_Krunchall_7848:HG2_Ill_GATKHC_9187:HG2_Ill_GATKHCSBGrefine_3845:HG2_Ill_250bpfermikitraw_7696:HG2_10X_SVrefine210Xhap12_4035;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4035:HG2_Ill_250bpfermikitraw_7696:HG2_Ill_GATKHCSBGrefine_3845:HG2_Ill_GATKHC_9187:HG2_Ill_Krunchall_7848:HG2_Ill_SVrefine2DISCOVARplusDovetail_10171:HG2_Ill_svaba_7101:HG2_PB_SVrefine2Falcon1plusDovetail_9432:HG2_PB_SVrefine2Falcon2Bionano_2765:HG3_Ill_250bpfermikitraw_7417:HG3_Ill_GATKHCSBGrefine_3724:HG3_Ill_GATKHC_9182:HG3_Ill_Krunchall_7695:HG3_Ill_SVrefine2DISCOVARDovetail_4232:HG3_Ill_svaba_7202:HG4_Ill_250bpfermikitraw_7745:HG4_Ill_GATKHCSBGrefine_3944:HG4_Ill_GATKHC_9288:HG4_Ill_Krunchall_8118:HG4_Ill_svaba_7224;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0893855;ClusterMaxSizeDiff=0.0558659;ClusterMaxEditDist=0.209945;PBcalls=8;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=87;DistBack=2163;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=73;REFWIDENED=5:11285982-11286054;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4323.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:47:0|1:37:4:1:40:./.:0:0:0:0:0/1:32:35:./.:.:.:.:.:.
chr5	11391277	HG2_PB_pbsv_5605	C	CATTCTCACTCATAGGTGGGAATTGGAACATGAGATCACATGGACACAGGAAGGGGAATATCACACTGGGGACTGTGGTGGGGTCGGGGAAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATAGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATTGTATACATATGTTAAACTAACGCTGACAATTGTGCACATGTACCCTAAAACTTAAGTATAATAATAAAAAAAAAAAAAAAATTAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGGCAGGAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3548:HG4_PB_pbsv_5637:HG2_PB_pbsv_5605:HG3_PB_assemblyticsfalcon_20948:HG2_PB_HySA_10356:HG4_PB_SVrefine2PBcRDovetail_2845:HG4_PB_SVrefine2Falcon1Dovetail_3421:HG2_PB_SVrefine2PBcRplusDovetail_8783:HG2_PB_SVrefine2PB10Xhap12_4069:HG4_PB_HySA_8289;NumClusterSVs=10;ExactMatchIDs=HG2_PB_pbsv_5605;NumExactMatchSVs=1;ClusterMaxShiftDist=0.214669;ClusterMaxSizeDiff=0.211091;ClusterMaxEditDist=0.221825;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=300;DistBack=0;DistForward=3;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:11391278-11391278;PctSeqSimilarity=0.973;PctSizeSimilarity=0.99;PctRecOverlap=0.9435;SizeDiff=3;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=96;MatchId=4324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:40:0|1:14:3:1:19:./.:0:0:0:0:0/1:31:10:0/1:7:9:.:.:.
chr5	12685942	HG2_Ill_SVrefine2DISCOVARplusDovetail_10178	G	GACATTAGAATTTAAAGCAGTAGACTGAGTAAAGAAGATAACCCCAACCAATGTAAGCAGGAATCATCCAATCTCTCGAGAGCCTGGTAGAACATAAAAGGGAGAAGGTGAATTCTCTCTCCTTGAGCCTGGGACATCCATCTTCTCCTTCCCTTGGACATCAGAGCTCCTAGTTCTCACACCTTTGGACGCCAGCGCTTAGCTGTGTGACTCCCAGGTTCTCAGACTTCCAGCCTCAAACTGGGACTTAGATCATTGACTCTCCTGGTTCTCAGGCCTTTGAAGTTAAACTGAATTACAGCACTGGCTTACCTGCTTCTCCAGCTTGCAGGAAGCAAATCATGGCACTTCTCAGCCTTCATAATTGTTGAGTCAATTTGCATAATAAATCTCTCTATATATATCCTATTCTATTTCTTTAAAGAACCTTAATACATATTGCGAAGCAATTGACAAAGATAAATAACCTATAATTATATTTGTTTTTGGTGATGGTTTTGATGTGCCATTAATTTGGAAATCTCTTCTATTGAATCTTACCTCTTTCATATGAAAAATTGCCATAGGACATCTATGTTTGTTGTTTGTGAACAGGAAAATGTCAGTTCCTAAGGTGTTGGTGAACAAACTGACTAGACTTGTTCTCCAATACATTTTTAAGTGTCTGAATTAAATATGTTTCTTTTAAATTTATTTTTCTTTTATCTTTAGAGACATGGTCTCCCTCTGCCACCCAGGCTAGAGTGCAATGGCATGACCATAGCTCACTGCTACCTCAAACACCTGGGCTCAAGTGATCCCCCTGCCTCAGCCTCTCAAGTGGCTAGAACCACAGGCTTATGCCACCATGCCTGGATAATTTTTAAAATCAATTATCTGTAGAGATGTGGTCTCGCTATGTTGCTCAGGCTGATCTCCAACTTCTGGCCTCAAGCAATCCTCCTGCCTCAGCCTTCCAAAACACTGGGATTACAGACCTGAGCCACTATGCCTGGCCTAAATATGTTTTAATGAAATAATTATTTCCAAGCCCTTTTTATTTTACTATGTTCCCTTTATCTAAAGGTATATTACCAGGTATCATAAAATTATCATCTGGTATAAAAGTTATACTTGATGAATAGATTATCTCCATGGCTTTGTAACTGTAGATTAGTAGATGACCGTTTTTACAGCTTGTAAATCTCAAAAACTTCCATGAAGCCAATCTCTGTGGTAAGTGCTGCCTTTGCATGGTGTCTTTTAATCTTCATACCACCCTATGCCATCTGCATTACTCTTTTACCCATTTACTTAAACTCATAGAGGTTAAGTGATTATCTAACACCTACAGCTCACAGGTGGCAAAGCCCTCACCTGTGTCACGGATCACAGCCAGTCAGGCTGCAAAGCTAAGCACATATGGAAGAAACCCTGCTGTGGCCACACAGCATCCCTCACCATCCCACAAAATGGTAATGACTGAACAGTAATCACTGTTGGGATCATGTTGCTAAATATACTCTTTTGCTACAGAAATAAAACTGAAGCTTTTGAAATGAAAAAGGTAATTTTGTTACTAGTTAAAACATAGAATTTTCAACAACTCTTGTTTCTTTTTGGGCAGTGATTAACAACTGAATATTCAAGAGTTTCTAAGTCATTGAAAGAGTCTATAAGTATAATATAAAAATATTGTTTAAAATATAATATTCATATGTAACCATATCATTAGAGATAAACTTTTCAGAAACCTGTTTTTGAAAAATGACTCCCTCAGACAATGAAATAGAAATTTTTGCACATTAAAAAAATTTGATTAAAGTGAGAATAATTTTCAGTACTCATTAGAAGAAAGAATAAGTGTAGGCAGAGAGAAAAATATCTCATGTTGAAGAAGTGATAAAACGTGATCACATAAAAAGCTATTTGTTATTGCTTTTACTAAGTTATGAATTAATTTCTGTTTATATATTAATATATTTTATTTAAATTAAGTTTAAGTATTTGTTAATTTTGCTACAATATGTTAGGTAAGGGAATGAAGGAAGAAAGTTAACTTCCATCATAAAGAGAGAAGTATGCAAGGATAATGTGATATAATGTGATATACAATGTATAAAAGCGAAGAATCACTCTGTAGGTATTTGAATGATGTATATATGTTCAAAAAAAAAAACTGGGTAGGCTGAAAAGTTAGTGCCTGTAGTGACTGATAGACAGGATCATTGAAAAACGAGTCAGTAAACATTGAAGGCAGCCGTGATCATTTCAGCATTTATGTTACTTTGATAAATAAGATCCTTTCTCAGTTGCTAATTTTTTCTTGCAAATTATTAAAATACCAATTTATAAAGTCTATAGTTACCACCAAAGTTCATTCAAACATATTTTTATAGACCATAATTTGTCAAAGTATAACCCAAGGAACTTTGTTCTGCCATATAATTTTAAAAATAAAAGCAAAACAAAAACCAAATATCTAGAATCATGTATATTTGAAAATGAAAAATATGTCTTTTATGGAATGTTATAAATTTCTTTAGCATAGTACCAATTAAAAAAGTTCTTCAGTAGTAAAATTCTTCCAAGCTTGTTAGAAAACTCATAAAGGAATGCAGAACATTTCTTTCCTCAGACTAGTGGAAAAAGAATACAGTATTCTGGAAATGAGCTTTCATATCTGCTTCCATTTCCCACTTGCAGATTCTCCATTTTGAATACACAGTTAAAATTCAGTTGCTTGTTTCAGTTTTGTTTTTCTCTATATCTTTAAAATGTGGAATCCGCTTCCTTCCTTCCTTCTTTCCAGACAAGGTCTTGCTATGTCACCCATACTGGTGTGCAGTGGTGAGGTCATAGTTCACTGCAGCCTTGAAATTCTGGCCTGAAGCAATCCCCCCATCTCAGCCTCCTGAGTAGCTGGGACCACAGAAGTGTGCCACCATGTCTGGCTAATTTTTAAAAATTTTTCTGTAGAGATAGTATCTCTTTATGTTGCCCAGGCTGGTTTCAAGTTCCTGGGCTCAAATGATTCTCCCACTTTGGCTTCCCAAAGTGCTAGGATTACCGTTGTGAGCTCCCGCACCTGGCCAAATGCAGAATTTTCTAACAAATAAGGCTATACCCTATTGTAAACATTGGCTTGACCACATGACAAATATATTTTATATATCAAGTTTTCGTTGTCATTAATTTCTACAAACTCCAATCACTACAAGACTTTACAGCACCTATCTCCTATTCCAATAAAAAAGTATTTATTCTTAGTGTTTGGAGAATACGTCTTTAGACATAGAAGGAAGGGAGGGAGAAAGGGAGGGAGGGAGGAAGGAGGGAAGGAAGAAAGGAAGGAAAAGGATTCCACATATTAAAGATATAGAGAAAAACAAAACTGAAACAAGCAACTAAATAACATGAAAAGTTATAAATTCCATGTCTAGAATTTAATGTACTAAAAATGTATTGTCAGAGATATCATTCTAGATCACATAATCTTCACTGAGCTGTGTGTTTTTAAAATCTTCATGATCATATAGTTATAGACTTGGGTTTCTTTCCAGTGAATGCCATACCATAAGAATGATCCATGCTGCTTTACATGTTCTCCTAGTTTTCGTCATTATTTTTTAAAACTTATTATTTTTGAAATGGGGTTTCACTGTGTTGCCAGGCTGGACTTAGGCTCTTGGGCTCAAGCCATCATCCTGTCTCAGCCTCCCTAGCAGCTGGGACTACAGATGTGCTTGGTCTCATATTGAATCCAACTGATGGCTAGACAGACACTAAGGGGATTTTTTTTGTGTGTGCACAGGATGATGGCTCTGTGTGACCATTCTGGAAAATGATACAGGTTCAGAAGTAAAATTACTTTGTCATAACACACACACACACACACACACACACACACACACACTATATATATATATATATATATATATAAAATCTCCATTAACATAAAATTAGATCCCTAAATCCTAACATCTACATCAACACTTTGTTCTATCTGGCTTTGATTTTTATTTTTCCAATCTGTTAGTAGCAAACAATCTCATTTTGTTTTGTTACAGTCTCATTTAACTAGAAATAAGTCTAAAGCCTCTCCTACACATGTAGTTTTTCCAGTTGTTTCTCTGTTTAGTCCCTTCTATATTTTGCACATTTTTCCCTTAAATTCCATCATTTTTCTTATTGATTTGTTTAAATTTCTCAACTACATTATTCATTAAGCCCTTCTCAGTTTTTGATTTTACAAATTTCTGCTTTACGTATATAATTTTTCTAGTAATTTGAAAGAATTTTACTTGGTGTCATTTCTTTGCTTATAATCTTGGCCCTGTAACGGCATTACTTAAATAAGTCATTATCATCAATAGGCCACAGTATATTTTTCCTACTTTTTTCCCCCTATTGGCTATTTATTTATTTATTTATTTTTGAGACAAAGTCTCGCTCTCTGTCGCCCAGGCTGGAGTACAGTGGCATGTTCTTGGCTCATTGCAACCTCTACCTTCTGGGTTCAAGCGATTCTCCTGCCTTAGCCTCTCGAGCAGCTGGGACCACAGGTGCATGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGAGGGTGGTTTCACTAAGTTGACCAGGCTGGTCTCAAACTCCTGACCTTGTGATCCACCCCCCTCAGACTCCCAAAGTGCTGGATTACAGGTGTGAGCCGCTGTGCCAGGCCAACTTTGTCGTTTTATCTTAAAGAAGCTTTGAATTCATCTGGCAGCCTCCCTGACATCCTCCTGGCCACCTAATAATGGAAATATCTACATTGAGTTTTCTCCATATTCAGGGCCACTTTTTAAAAACCTAATTTATTTAGCAAAGAGCCTTCTGGTCACTGATTTGTAAAGTCATTTCTATCATAGACACATGAATCTATTTCTGAGCTTTCTATTTTTCTCTACTGTGTCATTTTTGTCTTCCCACTAAAGGATTGTATTTTAATACCTACAAGAGTACATTTTCTTAATTCATTCATCTTTTCATATACAACTTAGCTATTTGAGGCTCTTTACCCTTTCATACATTCTTGCTTTAGTAGAAAATTTCAAGTACATTTAAATTTGGATTGTATCTAATTTATAGATGAATTTGGGGTCAGAATATGAAGTAGTTCCAGAATTGACTATAGTATAGCTCTGCGTATTTCAGATCTTATCATTTTGATTCTTTTATAGTTCCTACGTAGAAGATCATGTTATTTAAAAGCATTTGCGTATCTTTCCTTCGAGTTCCAACATATCTTATTGGTTTTTTGAACATAATATTTTATATGTTTCTAACTATCTGACCATTTTCATTAGTTTTCTGAGCTCCTTAAACTGATTTATTATTATTTAGTTCTAAATCTTAATGTATTGCTTTTGTTATATACTTTATTTGTTTTTCTCTCTCTCTCTCTTTCTCCCTTCCTTCTCAATGTTAGCATAACTTCACGGAACTTCATCTTTTAAAAGAATGAGGTTTTCAAAAAACGTGTAGTACAACAGTCAACCAAAACACTGACCTTTAATGCAGTGGACATAGGATCTATTACATCCAAGTATCTCAAAATTCTGCTGATAGTCCCATCTCCTGTGTTGTAATGTGTTTAATGGAATACAACCCTGACTCTATAGCAAAAGGCCCACCTGGAAAATAAATGGCCATTTGTGGCTCAAGTGTCTAGTTATAGAATAAGAGTTTGTAATTAATTTACATAATACCAAAGATTCTTGCTCTTATCCTTGTTTGACTGCTTTTTTTTTTTTTTTTTTTTTGAGGCAGGGTCTTACTCTGTCACCTAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGTAACCTCTGCCTCCTGGGCTCAAGTGATCCTCCCACCTCAACCTCCCAGAGTAGCTGGGACTACAGATGTGTGCCACCACATTTGGCTAATTTTTTTGTATTTTTAGTGGAGAGGAGGTCTTGCCTTGGTGCCCAGGCTGGTCTCAAACTCCTGAGCTCAAGCTATCTGCCCACCTTGGCCTCCTAAAGTGCTGGGATTAGAGACGTGAGCTACCATGTACAGCTGACTTTACTCTTAGCACATCTAATATATAGTGGTATAGTATATTGTTTGCCATGGACCCCTGTAGTGATAAAGAAACGCTCTTATAGGAAACGTATGATGCTTAATTTGTAACATTATGTACCAAAGTGTTGCTGATACTTTGGTGAATGTTATTCTTTAAACTTAAAAACTGTAGGCAACATGGATCTTTAAATCAATGTAGAGATTAATATATGAAATAGTTTAGCTACAGTTGATAAATTTAAACATAGATTTTCCAGACGTATTTTTTAAAAATGTACTCAGCTTGTCCAGTAATATTATATGCCCTAAGAATTTCTAAATTTGTCTATATTGGCTTTCATCCTCGTCTGCTAAAGGTTGTGAAAGATATAGAAAGGCAATATTATTTTTCAGTTGTCTTCTACAGATTTTCTACTGTGGCTGGTCCTTTTCTGTGAGGTAGTTTTTTTTTGCGTTCAAATTTAGTGTATTATATTTTTATGTTCTCTTTGTTTTCATATTTGCTGCTCCTGCTGCTTTTGTGTTTCTGTGTTCTATGTGTACATATTCACCACTCTGCTTGGATAATTTTTTCCTTCTCGAGCGTATTTGTTACTTAAACTCCACTTTCTCCTGGTAGCCACGATCTCACTTTGGTTGGCAGCTGGGCTGTGCCTGGAGGTTATGTGCTCTGGACCTCGGTGCCCATCTCTCCAGGGCGGCTCTGCTTCTGTGATTTCCCCTCTGGTTTACATCCGGCTTGGCTGCTACAGAATTCTGCCTTCTGCTTGTTTGTTTTTAGGCTCACTGGATTTTACCCATAAATGTGATTTGTTTTTCTTTTCAAAGGGAATTTATCCTTTTTTTGTGTATTGTTACTGGGTCTGTACCTGTAGACAATCATTTTATAACTCCTGATGCTGTTTTATAAAGGATTTCAATACTATACAGCTGACTCTGAGCCTCTGTAAAAATTTCAGTTTTATATCATTTTATATTTTATTTCACTCCTTTTACGAACTTTATTATATTGATAATACTTCAATAGACTGAAAATCAGTATAAGAAATAGAGGATAAAAAAAGTGGCAAAATTATCATTGCCAAATTGATATTTATAAAGAGGTGAGCATTATTTCATGTAAAACCTTACAGTTTTAATTATTCATACAATTTTCCTTTACAAAAATTTAAATTGTTTTTATTCAACATTGTTTTTATCATGATCATTTTATTCATAGTTAAAAATCAAGTAATTCTATAAATTTACCATTAAAACTGTACTCTCTATCCCCCATCATTCAAATTATCAGAGGCTATGGTATTAAATATATATGTGTATGTACATAAATAAAATAAAGTATATAAATATTTAAACAAACATGTATAATATAAAATAAGTATACTTTAAACAATATGAATATTTCTACAGAAAACTTCGAATTTATACAATGTATATTGGATAAAAACCATTAGGATTTAGATCTTATACAGAAATCTCTTTCATATAATCTGTTTTATCAAGCTGATTATATACTATACAATTCTCTTTTTTAATAGGTAGATAGCTGGACAGAGATACAGATTACAGTTAGCTATATAATTATTAAATATTTGAAAGATTAGAATTATATAAACTATATTGTCATTTAAACCATGCAATATTTATATTTCTTTTTCATTACAACTTTTTGGTCTTTTTCTGCATTTAATTATTGTCTCAATTATTTTATTTTGTTTAATATATGGCTTTCACCATTTCACAGCCAACATCTCTAACTGAAATCTAAAATCCCTTACACTATTGCCTTACACCTCTATTAATCTAATGCAATTGTCTGTAAATTTTTCCAAATTTATAGCATCATTGGCCTTTTTAGCATAGTAATAGATGTCATTGGATATACATTTTCATTGAATGGGGTATTGGCTACTTTTTGAAGATGTTTACCTATATTTGAAGAATCAATTATTATTTAAACATGAAGATTATTGTTTTAAAAAGTGGAAATCATTTTGGTTGAATCATCTAGTCACCCTTAACTAGAAATTATGACTTATTTGCAGGTTTACCTACTTTGTTATTTCTAGATCCAAAAATAAAGATCAAAACTTGATACCATCTATTCTTTAGGACAGATACATTGGGCAAATGTCACATCTGAACATTGTTTCATAAGCAAAATGCAAAGCCAAAACTTTTCTAATTTTAGAACATCCAAAATGTTTTTGTCATCTTAATTTGTCCTGAAATATCCTAGGCTTCCAATCAATAGAGAGGAGAGTAATTTTTTGATAAATTTTATGTGACAGAATTTTATGTAATTTAAATACAGGAGAATTTTTTTTAGGTAATCATATTTTAGCAAATGAAAAACTCCAAGAAATATTAGTATGAACATGCTTTTTCAAGTTATGATTTTAAATATTTTTATTGATTTATCTCCATGTTTTTAAATACATTTATATCAAATTATTCAGGAACAAATTTCAGGTTCTAAAACCTTCTATTTGTCTCAATTATAAATGTAGAAATAAAGATATCTGAAACAAGAAATGGACATATGAAGGTACATTGGTTATAAAGATTTTTTGATTTAAGTTTTTAAGCAAGTTCGGAATGATGAAGATGCAATATAGAAATATGGTAGGCATGTATTCACAAGCTAACTTTAACCTCTCCTTATTGACTTCACTAGCAACTATATTAAGTGTAGATATTTTCATAAAATGGTGAAATTTCCAGATTTTACAGAGCACAACATACTTCTAAATTCTGAACAGATGAATATTATTCTACACTGTGCTTGTTTTCTAAAAATATATTCTTTATTCTCCTTATTATTCATTGATATCCTGTTAATTAATTGATTATAATTTGTTAACTGGCTAACCCTCAATATATAACTCCAGGTTCTAAGTTTTGGCCATGAGAACTCTAGGAATCAATCAATGGGTACTGAACAATTTTTGATTTCCTAAAACAATGAAATATTTCGTATATTTATGAGTAGAATCAGGGCTTTCGTCAGATTTTTGTAGGTGTCTCTACGTGAAATGGTAAAAAGTTGTGTAAAGGAGAGAGGAAGAGGGAGACAGTAAGACAAAAAGAGAAGGATCACTATATATTTTTCATATTGCTAAATAAATTCTTTGCTGCATAATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCCTCTGTCGCCCAAACTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCCACCTCCTGGTTTCAAGCAATTCTCCTGCCTCAGCCTCACGAGTAGCTGGGATTACAGGCACGCACCACCATGCCTGGCTAATTTTTTGTATTTTTAATAGAGATGGGGTTTCATCATGCTGGCCAGGCTGGTCTCAAACTCCTGACCTTGTGATCCACCCACCCTGGCATCCCAAAGTGCTGGGATTACAGGTGTAAACCACCATGCTGGGCCAAAATTAAGTATATGTATATTTTTAAGTATTTTATTCACACTAATGCCTCATTAATTTGCGAGTAAGAAAAAGCTGCTTCTAGCAACCTCCATATTTACACTTTGACGGTAATCTGGGGAAACGTTTTTTGTTTTCAGCTGCTAATGCATTTGCTTTCTGGACAAAACCACTCAATAAAGAAAGTGTCAGGAGTAGAAAATTCACTGTGGAGTCCAGCTCACTGCAGTCTGCACTGGTCTGGACTGGAATATGTAATTCAGCATTGTATTTAGAAGATTGTAGAAGTATTTCGTTTGGCCAACTTTGTGTCTTTTAAGACTTGGTACTTGTGTAAATGACATATAACATAGACATAGTGAAACATGACAAATCCACATGAATAGTTTTTCCCAAAGTTTTAAATCTGTGTTATAGTTACACATAAAGGACATTGGGAAAATAGAGAGTCTGAGAAATGAAACCTTTCAAAATTTGAAAAGTTTACCTTTCTTAATGAAGAAAGTGGTTTTACTTCCATTAATTTATGAGCCTGTCTTCAGCTTCCCCTTTTTGAAGTATTTGAAATGGGCAAGAATTATACATTTCTCATTTAACAGTTTCCATTTTGTAAAGTGAGTCACTGCATTAATGGATGTACAACATTAATGGATGAATCTTTATTTGTAGTAAATTTTGTTCTTATAAAATCTTCCCTGGATATTTGACATCTTGGTAATATTAAAACCTTAACTTAATGAAATATGCTGTCAATAGGCATAACATACATGGAAAAGTGAATAAAAATGCTAACTTAAATATGCTGTTTTAAAAAAACAAAAAAAATGCTGTTTTGTACTGATCTCAAGATTAGCAATCCCATTTAGGACTGATGTGGAACAATCTATGCACAATTTGTCTTTACTTACAAAAGTCTTTGTAGTTTTCAAAAATGATTTACTATGTTATTTTTATTTTATGGTCCTGAAATACCTAGAAATGCTGGAATTGAGCATTCTTATATCTACAAATATCTGTGTTTATTGAAGATGTTTTATATTCTTTGATAACAGTAATTTTTGTATTTATATGGTCCCTTATATATTGCTGAGCAAATAATTGATTCATAATGTTTTTAATTTTTATGATTTCCAATTTATTTAAAATAACTTGCTTGTGAAAAAAAGAAAGTATATGAGAAAATAATAAAAAGTTGGGGAAAAATAAGCTTTTTGCTTTATCCAAATGAGAAAAATACTTATTTTTGTCATGGAATGGGAATAAATGAGGAAAATTAACATTTACATTAAAATATCTGAAGCATTGTTATTTAAGAATTGCCCACCCCCCTTTTGTTCCCTAGGAAGTAACATCAGTTGGGCATTAAAAAAAAAACTAGAATGACTATCATCAGTTGTGTTGTGTGGTTGTTGGTTAGTTCTATATAAAGAAAAATAAATGTGCACAGAAGGATTGGGAACAATTTTTAACAGGGTGGTTAGGGAAGGCCATACTAAGATGATTTTTAAAGAAAACAAGGAAACATCTTTAGGAAGATCATCATTCTAGCCAGTGCTATCTTTTGAGGATGGAGAATATGTGATAATATTAAGGAATACTAAGGAATCAGAAGTAATTAAAACGAAATGAATAGAAGCAATAGTAGGATACTAGATCCAAGTAGATACAATTATTTTTGTCCTATAGGTTATTGTAATGCTATTAGCTTTTGCTCTGATAAAGAGGAAAAGCCATTTGTGGTTTTGGGTTAACAGCTGTGATTATGATCTGCTTTTTGTTTTAGCAAGGTAGCATTAGTTTCACTGGCAAGGACAGATACAGGGAAACCAGTTGGGAGGCTATTGTGATAAGTTGGTTAGAGAGACATTGGTGTTATTTTCTAGAATGGTAGTACTAGAGGTGGTGAAATAATCAGATTATAGACTAAAAATATGTTTTGATGCTACAACCGAGACAATTTACTGATTATTTGGATATAGGGTAATTCCGAAAATTTTATCCTAAGCAACCATGATGATGAAGTTGATACTAACTGAGATGATGAAGACTATGGAAAGCAGAGGCCTGGGTAGTGGGCACATGGAAGGAACAGTAAGATTTTGATTTTAGCCATGTTACGTATGAAATACATATATATTCATGTGGGGATGTCACTTAAGCAGTTGGGTAAACTCATCTGGACTTGATGAAAGGCACCAGATATTTTCATTTAAGAGTTCTCAGCAATGATTTGAATGAGTTTGCCAAGGGAATAACCAAAGATACAGTTTACAAAGAGGGACAAGAATGAGCCACAACATTGTCCATTGTTAACATCCCAGAAAGAGGAAGAGAACCTTAGAAATAATCAGAGGAGAAATGAGTTGTGAGATACGGGGTAAGCCAGGTGAGGATAGCATCCTAGAAAGCAAATGAAGTTTTTTCAAGGATCAGGGAATAATCAGCTTTATTAAATACTGCTCAGTGGTCAAACAATGTAAGGATTGATAATTGATTATTGGATTAGCAAAGTGGATGTCATTAGTGACTTTGAAAAAGGTAGTTTCAGAGTAGTGATTTGGAAAGAAGCTAGCCTGAAATGAGTTTAAGAGAAGAGAAAGGGAAACAGTGAATACAACAAATATAAACAACATTGATAGGACTTTTGCTATAAAAAAGGGGGGCTAATAAACCTAGTGGGGAATGTGGTGTGGGGAAGAAAGAGGGAGAGTTTTGTAGCGTTTGTTTTTGATCAAACAAACAAAACCATGTTGTGTGCTGATAGAAATTATTCAATAGACAAGGGGGTGGGAGATGATCAAGCGAGAAAGTACAATTCCCAGAGCAATATACTCTCAGCACCAGAAGAGAGGAGTTACAGAGTAAATGTGGAGAAATTGGCTATTTTTGGAATTCTGGACAGTCTAGCTACAGAAAGAAGGGGAGTATATAGCACAGGTGCAGGTAGGTGAGTATATTAAATGAGATAACTTTGTAGAAGTTTTCTTCTGATTTCTCTTGTTTTCTCAATGAAATAGGCAAGATCTCTAGTTGATAATGAAGATGGGAGAAGAGGTTTTGAAAATGTAAACGTGATTAGATCAGGGAAATGTATCTGTGAAGCATCCAGGGCTCACTTAAGGGTGGTGGTAATGAATCCAAACTTTATCTTTAACTGAATGTTTTTCTGAGACTGAGTCTATGACAGGCCATGGAAGTTAATTTGTTAATAGACAGGGAGATATGCAGTAATTTGGACTGTGAAAAATTGGTAGATTAATAAGATTCTTGATTCTGGAGTAAAGTTGCCAGATAAAATATGAGATGCCTAGTTAAATCTGAATTTCAGATAAACAATGGCATTTAAAATAAATATGCCCCAAATATTGCATGGGGTATACTTATACTAAAAATATCTGATGTCTATTTGAAATTCAAATTTACCTGGTGGTTTTGTTTTTGGTTTTGTTGTTGTTTTATTTTTTCTGCATCTGACAATTCCATTCCAGAGAAGTTAAATGATTTTGGAATATGGGATGCATGACATGAAACATAAGAAGTGATAGCTTGTGTAATAATTAATATTGAGTCAATAGAGCAGTTATAGTTATCTGTAGTGAGACCAATTGATTGTGATTGGCCAGTGGAATATGGAAAACAGATTTATCACAGGAGAAACAGTCAAGGACTTGAGATTACTTACTATTTGAAGGATTATTAACAAAGTTGTTCAAATCACCAGAAATTAAGATGGAGGTGAAGACACATGTTAAGAATACTAAAGAAATTTTAGCAAAACCTTAATGAGCCTTAGAGAAGGCAAATGGACCAAGAGACAAAAGTAAAAGTCTATGATGATAAAACTGGAAAGAAAAGAAGGGTTGAAATTAGAAAAGGCATAAAACATACTAGGACTAATCAAGCAGAGGTAATTACTGCCAGTAGTTCACCACCTATGGTAGAAATATAAAGTCAAAACTGTGACTGTCGTCATGAGTTGGATATTTTTCTCACAGTTATACATTATTTATATTAAAAGTTAATATTTCTTTTATAATAAAATGCACAATTATAAACAAAGAATTTTAATTGAATATTTTTACCATTTTTTTATGATTAGTAATTGACAAGTACATTTTCCTTCTATAAAAGTCTGATATGTGACATCAAGCAATATAGTTAAGAATTAAAGCAAGTTTTATTTTTACAGTGAAATATATGAATATATGCAATGCCTATGTTTACATTAAAATTGTAAATATTTCTAAAATAGTATATTTTATGACTAAAATCTTGTTTGTAAGAAATCATACATGTGTGTTTTGTTTGTATGTGTGTGTATGGATATACCATAAAATTGAGTGCATGGTGTTTTTGAACCAGGGAAATGGATGTTGCTATAGTACCCTAAAGTGGGAGACCCCATAATGCTAGGTTAGTATATAGTATCAATACTCCATTTATATTTTTCCTCAGTATCAAGGCTCACAAATGATATTCCCAATCTTGAGCTTCTAAATAGCTGTAGATTTCTCTGGTTAGATTTTTCTGAGTAAAGATAATATAAAACATATAAAAAGGAAAATAAGTATAAAGTTTATACTTAGTGTATTGACCTAACGTTATTCTAGAACAAATGAATGTGTTTTATAAACAGCTGAAAAGGAGTCTTGGAAACATACACTAAATTACTGCAATTAGAGAGAGTGGTTGTTACTTGTGGTGAGACTGAAGTACACACACCTTCCATGTAAGATTGTTAATTGCAGGTAATTTGTTGTAAACAATAACGAGAGCACTAAACTTTGAATCTGGAGGCTGGATTTAATTGTGTTTTGCTACTAATTAGCTGTATATTTTGGGGAAAGTTTTGTATCTTTTCTGGATGCATGTGACCTGATATTAAAAATGAGTTGAAGGGCTAAGAGTCATTTTTAATTTTAAAAGGCTTAGCTTATATAGAAGTATTTATGTAAAAAGAATTGTTTATACTTCCATTTTCAGCTCCAACATGTAAATAGCTTGGAAGTCATAACTTCCATTCTTACAAAAAAAGCTGTACAAATGAAAAATCAGTGACTGTTTTTGGATCCATTAGGTGAAAAACAGGGTAAAGTAAAACGCCACATTGGTATGTAGAAATTGGTAGTTAGTGGGACAGTTGTATTTTAAAAGTGTTGATGGTGGATGATATGGTTTGGCTGTGTCCCCACCTAAATCTCAACTTGAATTGTATCTCCCAGCATTCCCATGTGTTGTGGGAGGAACCTAGGGGGAGGTAATTGAATCATGGGAGCCAGTCTTTTCCGTGCTATTCTTGTGACGTGAAAAAGTCTCACGAGATCTGATGGGTTTATCAGGGGTTTATGCTTTTGCTTCTTGGGATGACTCTTTAAAAAATAATGTGATGCTTTGTATAATGCTTCCTGGTACTCAGACCTGAGAGAATTTGCTCTTATTTGTCATAATAAAACAAATATTGAGTAATATAGATAACTTGATCATCTATTTTATCTCTTGAGTAATTAAAAATACATATGGTTGTTCTTAAGATCATAGTGTTTAGGTGGAAAGATAACGCCTGGATGTTTTCAGTAAAAGCACTTTCTCAGCCAAAATACAAAAATTTGCTTGGTAGTCTAGTATAACTCAAGAACAATTTTTAGAAAGTAAAGATTTATGGATATTAGACATTCTATATACATATTTTATTTGAATGAAGCTTTTGGAGTAAGGACATTATATGAAAATTTTTGGTAAATCCAGACCCTCATATTTCACAAATAGCCTGTTGGTGGGAGGTGGTGGTTGCAGGTAGAATGAACAGACTCATAGGAAAATTGGGCAGGCTAATGACTGCATATTACTAGCAAGAAGTTTATAATAAGCCACACTATTTTTATTCCCAATTGTCTCAATGTAGAAGTCTCATCTTCCAATTAAATGATAGATTGGGTAAGAAAATGGTATTAATGAAATGTAGTATATATACAATGTAGGTATATATACTTTAATAGAGTATATATAAAATAAAGTATATATGTACATACTTTATTACCATATATATAGTAAAAAAAAAAAAAAGGCATTAATACAATGATCTCTCTTCCTCCCTTTCTTCTGTCCTTCCTACCTCCTCTTTCACCTCCCTCCCTTACATCTTCCTTTCTGGCTTTCCTTCCTCTCTCTCTTCCTGAACAATGTTTCTGCCTGCTACATATGAAGCATTGCTTTTGGAACTTGGTCTGCTTCTAAGAAACTGTGATTGTTTCTCTATTTGTTAGAAAAGTCTGAACGATGAGAAATAAATTATATAAATATTTTAATTCCCCTTCACAGGCATTTATAAATATTTGTCAGCACTTTGAAGCAATTATTCTTTTAATTTAAAAAATAATTTTAGAAATTTACAGAAAAAATCACAAAGATGGTACATTGAGTTATCATGCCCCTTATGCCCATTTTCTCTTATTATTAACATCTTACATTAAGATGGTACATTTGTTACAAGTCATGAACTTTCATTGTCACATTGCTTTAAAATATAGTCTGTACTTTATGAAGATTTGTTTAGTTTTTACCTAATGTCCTCCTTCTGTCCCGGGATTCCATCCAAGATACCACATTACATTTAATTGTCATGTCTCATGAGGCTGCTCTATAGAGTGACAGTTTCTTAGACATTCATATTTTTGATGCCATTGACATTTTTGTGAAGTGATGGTCATATATTTTATAGAGTATCTCTCTTTTGGAATTCATCTGGTGTTTTTCTCATAATTAGATTGAGGTTATGGGTTTTTGAGAGGTAAAAGTGGTAAAGTTTCATTTTTATCATATCATAGGAGTATTTATTATCAACATGCATTATGGTTGTTCATGTTGACCTTGATTAATAACTGAGACAGTGTTTGTAAGTTTCTCCACTGTCAGGTTATTCTATTTTTCTCTTTTGTATGTTATACTTTTGGAAGAAAGTCACTATGTACAACCCACTTTTAAGGAGATGGTGGTTATGCTTCATCTTTCTGAGGGTGGAATGTGTGCATATATTAGTTGAAATTCTTACACATGGGAGATTTGTTAGCTATCTGTCTATGCGTCATCTATCTACTTATTCATTCATGAATTTGTCCATTCATTCATTCATCTTATCATTATAAGCTCATGGATATTTAGCTTATAGTTTTGGTTACAATGTGCCACAAACCGAACCTTTGTGTCCTCTCAAAATTCATACACTGAAACCCTAATCTCCCACGTGTGAAGGTATTAGAAAGTGGGGCCTTGGAAAATGATGAGGTCATGAGGCTGGAGCCCACCTAATGGAATTAATGCCCTCATAGAAGAGGCCCTAAGAGAGTTGCCTTATCCCCTTCTTTTATGTGAGGTTAAGGCTAGAACTCTCTGTACAATGTTAAATAGTAATAAGAGAGGACATGCAGGCTTTGGTCTTGATCTTAGAGGAAAAGATTCCCATTTCTCATGATTAAATATTATGTAGGTTAGGGTTTTCTTTATCAAGGTAATAAAATTTCCCCAACAAAGTATTTATAGGTTTTTTTATTTACCATAAATAACTCTGGGATTTTTTCAAATGTTTTTCTTCTGCATTAATAATGTTTGTTAATTATTATTATTATTAATAAGAGGTGGATCTGACTCACTATGTTGCCCAGGCTGGTCTCCAACACCTGCACTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTATAAGCACATGCCACCATGCCCAGCAATGATTAAAGTAAAATGATTATAAGATTTATTTTCTTTTTACTCAGTTGACAAGGTAGATTGTATTTATTGATTTTCAAATGTTGAATCTGCCTTGTAGGCCTGGAAAAGTGCCCACTTGGTTGTAATATATAATCATTTAATGCACTGTTACATGTGATTCGCTAATGTTATCAGTCTGTAGTTTTCCTGTGATGTCTTTTCTGTATTTTGGAGGGTTTTGTAAAGAATTTGTATTAATTATTCTTCAGTAGTTTAGTAGAATTCATCAGGGAAACCATTTGGTTTGGGATTTTCTTTGTGTAACGTTTTTGATTATTAATTCAACCTCATTACTTGTTAAAGCTCTACTCTGATTTTCAGTTTCTTGTTGAGTCAGTTTGAGTAGTTTGTGCCTTTTAGGAATTTGTCCATTTCATCAAACTTATATAACTTGTTGGCATGCAGTTATTTGTAGTATTACATTACAATTCTTTTTATATTTACATAAGCTCTGCAGTAATATATTTACTTTCTTTCCTGACTTTGATAATTTGGTTATTTCTTACTTATTGAGTAGTTCAGCTAAGTTTTTTTCTGAATTTTATTGAGTTTTTCAAAGAATTGACCGACTTTTGGCTTTGTTGATTTTTGTAGTTTGTTCCTGATCTCTCTGTTATTGATTCCCACTGTAATCCTCTTAATTCTTTCTCTTCTGCTTACTTTGGGTTTAATTTTCATATATAGATTGTGTTTGTTTTGGTGTCACTATCAAGAAATACCTGTCTTTAAGAAATCTGCCTAATATTTGAGCCTAAGTTTTCACAAGAGTAAGTAAAGATTCTTCAGTTTTCCTTCAAAGCTATTTTTTGTTTTGTTTTGATTTTAAATGGAAAGCTGAGCTATGAATAGGCACCTAGAAAAAATGCTAACAGTCAGGTGGACTTTATGGTTAATAGTAAGTTTTTAATGAATAATTATGTAATGAATGAATGCAATAATATATTACTTCCAGCTAAAATCTAGAAAAAAGTCCCTGAGGTTCAGCGAGGTTCTCTGATATTCATATAGCTTTCCAATATGCAATCAAGTTTTCTTATTATACATGAATGTACTTCTCATTACCTTACCTTCGTGGTAGCAGTGACTTGAGGCCTTAATAGATGAAAGCAAACAGTTTGATATACTTCAACAATCTCTAACTCTGAAGCCATTATTATTAATACTAAAATATTATTTCACATCTATGAAGTTTATTTATGAAGATCATTTAAATTTACAATGTTTGCTTTATAAAAAAGCAAAGATTCATAATAAAAATTTAAGATTCTCATTAGCTATCTGATAAACAGAAAATATAATCGGGAAGTATCCCTTAGCACTTTTGATGGCTAATTTTTTGTTAATAATTTGTCAACCTGTGATTAAATAAAAAATGATAGCTCTTCAAAACATACACAGATAATAGACATTTACAAACTAAAATTTCAGTCCCTAAATTTTATAAGTTCTTATTTTTGTATAAAATCAGAGAAAAATGCACAAATTCTAATTGTACAGCTCAATTAATTACCATAAGAAAACACACACTTGACCGGGTGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGTGGGCGCCTGTAGTCCTAGCTATTAGGGACGCTGAGGCAGGAGAATGGCTGAACCTGGGAGATGGAACTTGCAGTGAGCTGAGATCGTGCCACTGCATTCCAGCCTCGGTGACAGAGTGAGACTCTTTCCCAAAAAAAAAAGAAAACACACACTTGGGGTGGGCACTCTTGTTAAGATGTAGGATAGGAAAAGCTCATAATGCCTGGTTCCTCCAAACCATAACAGGCTCCCCTTCCCAGAAGTAACAACAATACTGAGTTCCAACCTTACAGATTTTTTTCCTAAGTTTTTAACATAATACAAATAGAACCATACTAAATGTCTTATTTTCATTCTGGCTTTTTTGTACAACATAATTATGAGATTGGTGCATGAGATATATATATATATATGGGTAATATTTAGAAAGATTGGTGCATGAAATACATATATATAATATGATATGCACCAATCTCTCTCTAAATATATATATGTATATTCTAAATATATATACACACATAATGGCATATATATATCTTATTTCAATATTTTAAAATGTCATTGGTATGCCTATTAGTTGGGGTTCTGCAGAGATTTTATATATGTGTATATGTAGAGAGATATATACACACATACATATATATATACTCTGTGTGCATACTCTGTGTGTCTTTATGTGTGTGTGTATATATACATATATTTTAAAAGGGATTTGTTATAAGGAGTTGGCTTACACAATAATTATGGAGGCTAGAAAATCCTGAGATATACAGGTTGAGTGGGTAAACTGAAGAGCCAATGGTGTAATTTCAGTGAAAGGCCACATAGTTCAAGATCCAGGAGGAGCGAATGTTTAAATTTGGGTCCGAAGGCAAAGAAAATTAATGCTTCAAAAGGGCATCAGGCAGAAAACAGTCTCTCTATTTGGGGGAGAGTCAGGCCTTTGTTCTATTCTGATGTACAAATGATTGGATGTGGCCTACTCATATTAGGAAGGGCAATCTGCTTTACTTAATCCATTTTATAATTTAAATGTGAATCTCAAACAAAGTACCCTCACAGAAACACCCAGAATAATCTTTGACCAAATATCTGGGCATCTGGTGGTTCAGTAAAGTTAATATATAATACTAACCATCACAGTATGTATTATTACTGTGATGTATTATAGTTATC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23197:HG2_10X_SVrefine210Xhap12_4041:HG2_PB_SVrefine2PB10Xhap12_4075:HG3_Ill_SVrefine2DISCOVARDovetail_4240:HG2_Ill_SVrefine2DISCOVARplusDovetail_10178:HG2_PB_SVrefine2PBcRplusDovetail_8787:HG3_PB_SVrefine2PBcRDovetail_2590:HG3_PB_SVrefine2Falcon1Dovetail_3489;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10178:HG3_Ill_SVrefine2DISCOVARDovetail_4240;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0044315;ClusterMaxSizeDiff=0.0044315;ClusterMaxEditDist=0.00781775;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=20125;DistBack=23207;DistForward=4215;DistMin=4215;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=5:12685943-12685944;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:61:0|1:34:0:1:24:./.:0:0:0:0:0/1:28:14:0/1:203:276:.:19769:.
chr5	14015709	HG2_Ill_MetaSV_3909	C	CCTGAGAAATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3550:HG2_PB_assemblyticsfalcon_21033:HG4_PB_pbsv_5655:HG2_PB_pbsv_5623:HG2_PB_SVrefine2Falcon2Bionano_2776:HG4_PB_SVrefine2PBcRDovetail_2853:HG2_PB_SVrefine2Falcon1plusDovetail_9443:HG4_Ill_SVrefine2DISCOVARDovetail_4150:HG4_Ill_MetaSV_4078:HG2_Ill_MetaSV_3909:HG2_Ill_GATKHCSBGrefine_3864:HG4_PB_SVrefine2Falcon1Dovetail_3430:HG4_PB_HySA_8314;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3864:HG2_Ill_MetaSV_3909:HG4_Ill_MetaSV_4078:HG4_Ill_SVrefine2DISCOVARDovetail_4150;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0803213;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.123552;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=123;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=5:14015710-14015722;PctSeqSimilarity=0.996;PctSizeSimilarity=0.9919;PctRecOverlap=0.984;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4326.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:27:./.:34:8:8:18:./.:0:0:0:0:0/1:35:6:./.:.:.:.:.:.
chr5	14303130	HG2_PB_assemblyticsfalcon_21036	G	GTTGGGATGGCTGCCGCAGGACCGTTGATGATCCTGGAGATGGGGGGTGTCAGTGGAGGAGATTGAGCCGGGA	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_21036:HG4_PB_HySA_8317:HG2_PB_HySA_10390:HG2_PB_pbsv_5624;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsfalcon_21036;NumExactMatchSVs=1;ClusterMaxShiftDist=0.241135;ClusterMaxSizeDiff=0.241135;ClusterMaxEditDist=0.326241;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=72;DistBack=-95;DistForward=93;DistMin=-95;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=773;REFWIDENED=5:14303081-14303853;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:27:./.:7:11:24:4:./.:0:0:0:0:0/0:10:0:./.:.:.:.:.:.
chr5	16391776	HG3_PB_assemblyticsfalcon_20991	GAAAACAAAAATTCTT	TGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3499:HG2_PB_pbsv_5629:HG4_PB_pbsv_5661:HG2_Ill_breakscan11_3551:HG3_PB_pbsv_5463:HG4_PB_HySA_8334:HG3_PB_HySA_8599:HG2_PB_HySA_10409:HG2_PB_assemblyticsfalcon_21050:HG3_PB_assemblyticsfalcon_20991:HG2_PB_SVrefine2Falcon1plusDovetail_9450:HG4_PB_SVrefine2Falcon1Dovetail_3434:HG4_PB_SVrefine2PBcRDovetail_2857;NumClusterSVs=13;ExactMatchIDs=HG3_PB_assemblyticsfalcon_20991;NumExactMatchSVs=1;ClusterMaxShiftDist=0.193548;ClusterMaxSizeDiff=0.182986;ClusterMaxEditDist=0.292467;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=294;DistBack=-1;DistForward=-16;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:16391792-16391775;PctSeqSimilarity=0.9495;PctSizeSimilarity=0.8991;PctRecOverlap=0.948;SizeDiff=-33;StartDistance=-5;EndDistance=10;GTMatch=0;TruScore=93;MatchId=4328.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:36:0|1:25:2:1:24:./.:0:0:0:0:0/1:45:6:0/1:14:33:.:.:.
chr5	16716613	HG3_Ill_GATKHCSBGrefine_3746	T	TAAGAAGTATGACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACAAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3552:HG3_PB_HySA_8604:HG3_PB_assemblyticsfalcon_20996:HG4_PB_pbsv_5663:HG3_PB_SVrefine2Falcon1Dovetail_3500:HG3_PB_pbsv_5467:HG4_Ill_SVrefine2DISCOVARDovetail_4166:HG2_PB_assemblyticsfalcon_21054:HG2_PB_assemblyticsPBcR_20355:HG4_Ill_MetaSV_4082:HG4_Ill_GATKHCSBGrefine_3967:HG3_Ill_GATKHCSBGrefine_3746:HG2_PB_SVrefine2PBcRplusDovetail_8797:HG2_PB_SVrefine2PB10Xhap12_4081:HG2_PB_SVrefine2Falcon2Bionano_2782:HG2_PB_SVrefine2Falcon1plusDovetail_9451:HG2_Ill_SVrefine2DISCOVARplusDovetail_10201:HG2_Ill_MetaSV_3911:HG2_Ill_GATKHCSBGrefine_3877:HG2_10X_SVrefine210Xhap12_4063:HG4_PB_SVrefine2Falcon1Dovetail_3435:HG2_PB_HySA_10414:HG2_PB_PB10Xdip_23396;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4063:HG2_Ill_GATKHCSBGrefine_3877:HG2_Ill_MetaSV_3911:HG2_Ill_SVrefine2DISCOVARplusDovetail_10201:HG2_PB_SVrefine2Falcon1plusDovetail_9451:HG2_PB_SVrefine2Falcon2Bionano_2782:HG2_PB_SVrefine2PB10Xhap12_4081:HG2_PB_SVrefine2PBcRplusDovetail_8797:HG3_Ill_GATKHCSBGrefine_3746:HG4_Ill_GATKHCSBGrefine_3967:HG4_Ill_MetaSV_4082:HG4_Ill_SVrefine2DISCOVARDovetail_4166;NumExactMatchSVs=12;ClusterMaxShiftDist=0.146667;ClusterMaxSizeDiff=0.146667;ClusterMaxEditDist=0.241436;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=310;DistBack=12;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:16716614-16716627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:64:./.:0:0:0:0:./.:0:0:0:0:1/1:0:15:1/1:1:55:.:.:.
chr5	17712605	HG2_PB_SVrefine2PB10Xhap12_4084	T	TAGAAAAATATACACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3553:HG4_PB_pbsv_5667:HG3_PB_pbsv_5472:HG2_PB_pbsv_5636:HG2_PB_HySA_10435:HG3_PB_assemblyticsfalcon_21010:HG3_PB_SVrefine2Falcon1Dovetail_3504:HG4_Ill_MetaSV_4084:HG2_PB_assemblyticsfalcon_21070:HG2_PB_assemblyticsPBcR_20373:HG2_PB_HySA_10434:HG2_PB_PB10Xdip_23441:HG2_PB_PB10Xdip_23440:HG3_PB_HySA_8618:HG2_PB_SVrefine2Falcon1plusDovetail_9455:HG2_10X_SVrefine210Xhap12_4067:HG2_PB_SVrefine2PBcRplusDovetail_8802:HG2_PB_SVrefine2PB10Xhap12_4084:HG3_PB_SVrefine2PBcRDovetail_2599:HG2_PB_SVrefine2Falcon2Bionano_2785:HG4_PB_SVrefine2Falcon1Dovetail_3439:HG4_PB_HySA_8351;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4084:HG2_PB_SVrefine2PBcRplusDovetail_8802;NumExactMatchSVs=2;ClusterMaxShiftDist=0.151111;ClusterMaxSizeDiff=0.151111;ClusterMaxEditDist=0.183704;PBcalls=19;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=336;DistBack=449;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=5:17712606-17712622;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9941;PctRecOverlap=0.9941;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:73:./.:7:13:0:16:./.:0:0:0:0:1/1:0:31:./.:3:38:.:.:.
chr5	17812188	HG2_PB_SVrefine2PB10Xhap12_4085	T	TATATATATAAATATATATAAATACATATATAAATATATATAAATACATATATAAATACATATATAAATACATATATAAATACATATATAAATACATATATAAATACATATATAAATACATATATAAATATATATAAATATATATATAAATATATATAAATATATATATAAATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATAAATATATATATAAATATATATATAAATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATATAAATATATATATAAATATATATATATAAATATATATATAAATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAATATATAAATATATATATAAATATATATATAAATATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATAATATATATATAAATATATAAATATAAATATATATATAAATATATATATAAATATATATATAAATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATAAATATATATATATAAATATATATATAAATATATATATATAA	10	PASS	ClusterIDs=HG4_PB_pbsv_5668:HG2_PB_pbsv_5637:HG3_PB_SVrefine2Falcon1Dovetail_3507:HG2_PB_SVrefine2PBcRplusDovetail_8803:HG4_PB_SVrefine2PBcRDovetail_2861:HG3_PB_SVrefine2Falcon1Dovetail_3506:HG2_PB_SVrefine2Falcon1plusDovetail_9456:HG4_PB_SVrefine2Falcon1Dovetail_3441:HG2_PB_SVrefine2Falcon2Bionano_2786:HG2_PB_SVrefine2PB10Xhap12_4085:HG3_PB_pbsv_5473:HG3_PB_SVrefine2PBcRDovetail_2601;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4085;NumExactMatchSVs=1;ClusterMaxShiftDist=0.284153;ClusterMaxSizeDiff=0.284153;ClusterMaxEditDist=0.285519;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=788;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=329;REFWIDENED=5:17812189-17812517;PctSeqSimilarity=0.9457;PctSizeSimilarity=0.9213;PctRecOverlap=0.9214;SizeDiff=62;StartDistance=-24;EndDistance=-24;GTMatch=1;TruScore=92;MatchId=4332.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:1:44:1:9:./.:0:0:0:0:0/1:10:14:0/1:7:39:.:.:.
chr5	17884024	HG2_Ill_GATKHC_9263	T	TTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG4_PB_pbsv_5669:HG4_Ill_manta_1387:HG4_Ill_GATKHC_9365:HG4_Ill_GATKHCSBGrefine_3974:HG4_Ill_150bpfermikitraw_7477:HG2_Ill_GATKHC_9263:HG2_Ill_GATKHCSBGrefine_3885:HG3_Ill_GATKHC_9244:HG3_Ill_GATKHCSBGrefine_3750:HG3_PB_pbsv_5474;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3885:HG2_Ill_GATKHC_9263:HG4_Ill_150bpfermikitraw_7477:HG4_Ill_GATKHCSBGrefine_3974:HG4_Ill_GATKHC_9365:HG4_Ill_manta_1387;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.229508;PBcalls=2;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=45;DistForward=16590;DistMin=45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=5:17884023-17884026;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4333.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:0|1:19:5:4:18:./.:0:0:0:0:0/1:9:12:./.:.:.:.:.:.
chr5	18570155	HG4_Ill_GATKHCSBGrefine_3979	T	TGAAACTATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_10444:HG2_PB_pbsv_5644:HG3_PB_pbsv_5478:HG3_PB_assemblyticsfalcon_21020:HG4_PB_pbsv_5676:HG3_PB_SVrefine2Falcon1Dovetail_3508:HG2_PB_assemblyticsfalcon_21083:HG2_PB_SVrefine2Falcon1plusDovetail_9457:HG3_Ill_manta_1301:HG4_Ill_MetaSV_4085:HG4_Ill_GATKHCSBGrefine_3979:HG3_Ill_MetaSV_4102:HG3_Ill_GATKHCSBGrefine_3754:HG2_Ill_MetaSV_3914:HG2_Ill_GATKHCSBGrefine_3890:HG2_10X_SVrefine210Xhap12_4071:HG4_PB_SVrefine2Falcon1Dovetail_3442:HG3_PB_SVrefine2PBcRDovetail_2603:HG4_PB_HySA_8361:HG2_PB_HySA_10445:HG2_Ill_breakscan11_3554;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4071:HG2_Ill_GATKHCSBGrefine_3890:HG2_Ill_MetaSV_3914:HG3_Ill_GATKHCSBGrefine_3754:HG3_Ill_MetaSV_4102:HG4_Ill_GATKHCSBGrefine_3979:HG4_Ill_MetaSV_4085;NumExactMatchSVs=7;ClusterMaxShiftDist=0.141509;ClusterMaxSizeDiff=0.138365;ClusterMaxEditDist=0.229167;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=315;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=5:18570156-18570164;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4334.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:36:0|1:24:4:0:21:./.:0:0:0:0:0/1:21:12:0/1:6:32:.:.:.
chr5	18606934	HG2_Ill_svaba_7175	G	GTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7252:HG3_Ill_manta_1302:HG2_PB_HySA_10446:HG3_Ill_Spiral_6100:HG2_Ill_manta_1592:HG2_Ill_SpiralSDKrefine_13364:HG2_PB_PB10Xdip_23528:HG2_PB_PB10Xdip_23527:HG3_Ill_Krunchall_7753:HG2_Ill_Krunchall_7922:HG2_PB_assemblyticsPBcR_20384:HG3_Ill_svaba_7258:HG3_Ill_250bpfermikitraw_7489:HG3_Ill_150bpfermikitraw_7292:HG2_Ill_svaba_7175:HG2_Ill_250bpfermikitraw_7777;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7252:HG3_Ill_svaba_7258:HG3_Ill_250bpfermikitraw_7489:HG3_Ill_150bpfermikitraw_7292:HG2_Ill_svaba_7175:HG2_Ill_250bpfermikitraw_7777;NumExactMatchSVs=6;ClusterMaxShiftDist=0.309278;ClusterMaxSizeDiff=0.309278;ClusterMaxEditDist=0.32967;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=36747;DistForward=38644;DistMin=36747;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=5:18606933-18606936;PctSeqSimilarity=0.925;PctSizeSimilarity=0.9273;PctRecOverlap=0.8545;SizeDiff=4;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=90;MatchId=4335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:56:./.:16:28:17:15:./.:0:0:0:0:0/1:25:13:./.:.:.:.:.:.
chr5	18673692	HG2_PB_PB10Xdip_23529	T	GAAGGAGAAGGGGTTGAGGGGTACTTTCCCCTGCCCCAGGAAAGCGGGACTTGCTGCTAAGGGC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_23529:HG3_PB_assemblyticsfalcon_21021:HG3_PB_HySA_8629:HG4_PB_pbsv_5677:HG2_PB_HySA_10448:HG2_PB_pbsv_5645:HG2_PB_PB10Xdip_23530;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_23529:HG2_PB_PB10Xdip_23530;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0620155;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.27907;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=63;DistBack=26955;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=5:18673691-18673693;PctSeqSimilarity=0.9922;PctSizeSimilarity=0.9844;PctRecOverlap=0.9692;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4336.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:31:1/1:2:9:1:17:./.:0:0:0:0:1/1:1:9:./.:.:.:.:.:.
chr5	18762564	HG2_PB_SVrefine2PB10Xhap12_4089	T	TATATATATTTAAGTATATATATTTAATATAAATATGTATTAAATATATATTTAATATAAATATATATTTAATATATATTAAATATACATTTAATATAAATATATATTTAATATATATTAAATATACATTTAATATAAATATATATTTAATATATATTAAATATACATTTAATATAAATATATATTAAATATATATTAAATATACATTTAATATAAATATATATTAAATATACATTTAATATAAATATATATTAAATATATATTAAATATACATTTAATATAAATATATATTAAATATATATTAAATATATATTAAATATACATTTAATATAAATATATATTAAATATATATTAAATATACATTTAATATAAATATATATTAAATATATATTAAATATATATTAAATATACATTTAATATAAATATATATTAAATATATATTAAATATACATTTAATATAAATATATATTAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2862:HG2_PB_assemblyticsfalcon_21086:HG4_PB_SVrefine2Falcon1Dovetail_3444:HG2_PB_SVrefine2Falcon1plusDovetail_9458:HG3_PB_HySA_8630:HG2_PB_HySA_10450:HG2_PB_pbsv_5646:HG2_PB_SVrefine2PBcRplusDovetail_8805:HG4_PB_pbsv_5678:HG2_PB_SVrefine2PB10Xhap12_4089:HG2_PB_SVrefine2Falcon2Bionano_2789:HG3_PB_SVrefine2PBcRDovetail_2604:HG3_PB_pbsv_5480:HG3_PB_SVrefine2Falcon1Dovetail_3509;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2789:HG2_PB_SVrefine2PB10Xhap12_4089:HG2_PB_SVrefine2PBcRplusDovetail_8805;NumExactMatchSVs=3;ClusterMaxShiftDist=0.216336;ClusterMaxSizeDiff=0.216336;ClusterMaxEditDist=0.315325;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=471;DistBack=3520;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=519;REFWIDENED=5:18762565-18763083;PctSeqSimilarity=0.9868;PctSizeSimilarity=0.9936;PctRecOverlap=0.7134;SizeDiff=3;StartDistance=-134;EndDistance=-134;GTMatch=1;TruScore=89;MatchId=4337.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:156:1/1:1:13:0:19:./.:0:0:0:0:1/1:0:30:0/1:3:26:.:.:.
chr5	20472088	HG4_Ill_MetaSV_4088	T	TATTATCAAGATTTAATCCCTTATCTCCTTCAAGTCTTCACTCAAACATCACCTTCAGGGGGCCTCTCCTGACCAATCTGTTTAGAATTACACCTCTCTCCCAGGACTCACAACCAGCTACCCTGCTTTATCTTCTCAGCAATTCTCACCTTCCCACATGCTGCATTGCACCCATCAACTCTCTTCACTTCTAGAATGTAAGTTCAGTAAGGTCAGGGAGATTTATCTATGCTATTTGTTGCTATATCTTCTCAGGTCCTTAGAACAGTGCTAAGCACATAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23665:HG4_Ill_Spiral_459:HG3_Ill_Spiral_6113:HG2_Ill_Spiral_411:HG3_PB_assemblyticsfalcon_21038:HG2_PB_assemblyticsfalcon_21101:HG2_PB_assemblyticsPBcR_20401:HG3_PB_pbsv_5487:HG2_PB_pbsv_5653:HG4_Ill_SVrefine2DISCOVARDovetail_4176:HG4_Ill_MetaSV_4088:HG4_Ill_GATKHCSBGrefine_3988:HG4_Ill_Cortex_2890:HG3_PB_SVrefine2PBcRDovetail_2607:HG3_PB_SVrefine2Falcon1Dovetail_3513:HG3_Ill_manta_1303:HG3_Ill_SVrefine2DISCOVARDovetail_4281:HG3_Ill_MetaSV_4105:HG3_Ill_GATKHCSBGrefine_3762:HG3_Ill_Cortex_2903:HG2_PB_SVrefine2PBcRplusDovetail_8809:HG2_PB_SVrefine2PB10Xhap12_4094:HG2_PB_SVrefine2Falcon2Bionano_2791:HG2_PB_SVrefine2Falcon1plusDovetail_9462:HG2_Ill_SVrefine2DISCOVARplusDovetail_10216:HG2_Ill_MetaSV_3918:HG2_Ill_GATKHCSBGrefine_3899:HG2_Ill_Cortex_6924:HG2_10X_SVrefine210Xhap12_4074:HG4_PB_SVrefine2Falcon1Dovetail_3448:HG4_PB_pbsv_5685:HG2_PB_HySA_10472:HG4_PB_HySA_8376:HG2_PB_PB10Xdip_23666;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4074:HG2_Ill_Cortex_6924:HG2_Ill_GATKHCSBGrefine_3899:HG2_Ill_MetaSV_3918:HG2_Ill_SVrefine2DISCOVARplusDovetail_10216:HG2_PB_SVrefine2Falcon1plusDovetail_9462:HG2_PB_SVrefine2Falcon2Bionano_2791:HG2_PB_SVrefine2PB10Xhap12_4094:HG2_PB_SVrefine2PBcRplusDovetail_8809:HG3_Ill_Cortex_2903:HG3_Ill_GATKHCSBGrefine_3762:HG3_Ill_MetaSV_4105:HG3_Ill_SVrefine2DISCOVARDovetail_4281:HG3_Ill_manta_1303:HG3_PB_SVrefine2Falcon1Dovetail_3513:HG3_PB_SVrefine2PBcRDovetail_2607:HG4_Ill_Cortex_2890:HG4_Ill_GATKHCSBGrefine_3988:HG4_Ill_MetaSV_4088:HG4_Ill_SVrefine2DISCOVARDovetail_4176;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0875657;ClusterMaxSizeDiff=0.0875657;ClusterMaxEditDist=0.182741;PBcalls=17;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=281;DistBack=47233;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:20472089-20472089;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4338.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:94:1/1:1:29:0:21:./.:0:0:0:0:1/1:0:11:./.:.:.:.:.:.
chr5	21875701	HG3_Ill_MetaSV_4109	G	GTATGTAGTCTGAACTTTGAGATTAATAGCCATCTCCTTTTTTCATTCTAAAATTTAACCACCCTGCTTCTGTAAACTTCTTCTGTAGGGAATGTCTTTTGCTCTCTGTCCAAAAAAAGTCAGAGCTCTGCCACTTAATTTTTGGGTAACAATTTTGAGCCTCTTATCTAAGAATTGGAAATTTGTAACTGAATTTCACAAACAGGTTAACAAAGATTAAATTTAACAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_5659:HG2_PB_PB10Xdip_23675:HG4_PB_pbsv_5692:HG4_Ill_Spiral_461:HG3_Ill_Spiral_6128:HG2_Ill_Spiral_412:HG4_Ill_MetaSV_4094:HG2_Ill_MetaSV_3922:HG2_PB_assemblyticsPBcR_20414:HG2_PB_SVrefine2PBcRplusDovetail_8814:HG4_Ill_GATKHCSBGrefine_4000:HG3_Ill_SVrefine2DISCOVARDovetail_4287:HG3_Ill_MetaSV_4109:HG3_Ill_GATKHCSBGrefine_3768:HG2_Ill_GATKHCSBGrefine_3909:HG2_PB_HySA_10496:HG3_PB_pbsv_5495:HG2_Ill_SVrefine2DISCOVARplusDovetail_10219:HG2_PB_SVrefine2PBcRplusDovetail_8815:HG2_PB_SVrefine2PB10Xhap12_4101:HG4_Ill_SVrefine2DISCOVARDovetail_4185:HG2_10X_SVrefine210Xhap12_4079;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3909:HG3_Ill_GATKHCSBGrefine_3768:HG3_Ill_MetaSV_4109:HG3_Ill_SVrefine2DISCOVARDovetail_4287:HG4_Ill_GATKHCSBGrefine_4000;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0685225;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.242171;PBcalls=9;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=229;DistBack=-1;DistForward=4942;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=5:21875702-21875701;PctSeqSimilarity=0.9978;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:1/1:0:36:0:5:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr5	22529137	HG4_Ill_250bpfermikitraw_7862	C	CATATATGCATATATATGCATATACATGTGTATATATGTATATATGCATATATATGCATATACATGTGTATATATGTATATATGCATATATATGCATATACATGTGTATATATGT	20	PASS	ClusterIDs=HG4_Ill_250bpfermikitraw_7862:HG2_PB_HySA_10502:HG2_PB_PB10Xdip_23702:HG2_PB_pbsv_5661;NumClusterSVs=4;ExactMatchIDs=HG4_Ill_250bpfermikitraw_7862;NumExactMatchSVs=1;ClusterMaxShiftDist=0.093617;ClusterMaxSizeDiff=0.0595745;ClusterMaxEditDist=0.168776;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=114;DistBack=39971;DistForward=55;DistMin=55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=157;REFWIDENED=5:22529125-22529281;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4340.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:46:0|1:26:2:4:42:./.:0:0:0:0:0/1:19:16:./.:.:.:.:.:.
chr5	22873807	HG2_PB_SVrefine2PB10Xhap12_4104	A	ATGACTCACTCTGGCCAATGGGATGTCAGCACACTTGACTCAAGTGAAGGCTGAGTCAAGGTGTAACAGAGATTTTTCTTTTATGTTTCTACACTTTCTTGAGAAAATCATGTTTTGGGTATTAACAAGGACTCTTGTTGCGCCCTGGCGAAGATTCCCTGCTTATCCAAAGTTTGTTCAGACCAGTTGAGCCGTCATTTTGTCTAAGCCTCCTCTTCGTGTCCATGCGTGACTTAAAGATTCCAGTTTCAGAAAAGAATCCTGCTAAAGCAGCTGATTAAGAATCTTCCCATCCTTGATACCCAGTTAAGCTTCTCTTCCTCCACCCTTGATATCTAATCATGTTCCTTACCTCCTTCACTCTTGCTATCTGACCAAGTTTCTCTTAATAATTTTCCCTTTGCTGAGTCCTTATGTGTCTGTGGACTATAAATTCCCAGTTGTTCCTTTTGTATTCGGAGTTGAATTCTATTTTTCTCCACTATGGCAATAGTCTTGAAGAAAGACTTGTTTGCCTATTTAACTAGTCAGGTGCATTGTTTTTTTGTAGTTGCCCACCGATCATAAGTAACTCACACACTAGAGCTATCTCACTGAAGCCACAGAACTCTAGCTTGAAACTGAAAAGAAAAAAAAAAATGGTATTTCCAGGCCGGGTGCAATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGAGGGCGGATCACGAGGTCAGGAGATCGAGACCAACCTGGCTAACACGGAGAAACCCCGTCTCTACTAAAACTACAAAAAAAAAATTAGCCGGGCATGGTGGCGGGCTCCAGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCAGAGATAGCAACACAGCACTGCAATCTGGGTGACAGAGTGAGATTCCATCTCAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAATGCTATTTCCATGCTACTGAGTTTTAGAGCGTTTACTGACCAATAGTAGCTTCGCAGTTATAAACGTTTTAGACAATATTCAGGATATTAACAAAAATTTGTTTTTCTCCTGATCAGAATGAAATTTAAAAAAGAAATAGAATTGTATATTTTCCAAGGAGAATATATTACAAGGAATATTCATTATGGTTACATTAAGATGTCAACAATAAATTACATTTCTGAATAATGTTTACTTAGTAATAACATTTATACCTGAGGGATTTGTTTCAAATCCTTAATTCTAGAAAATTTTGAGTGTTTCAATAGCTAGTTCATGACATGGGGTTTTATGGGGGCATCACGATTTGGGGTGTTTGGATAGGTATTCGAAAAAGAAGTAATTATTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3452:HG3_PB_pbsv_5497:HG2_PB_pbsv_5664:HG4_PB_pbsv_5698:HG2_Ill_breakscan11_3556:HG2_PB_PB10Xdip_23705:HG2_PB_HySA_10504:HG4_PB_HySA_8398:HG3_PB_SVrefine2PBcRDovetail_2612:HG3_PB_SVrefine2Falcon1Dovetail_3516:HG2_PB_SVrefine2PBcRplusDovetail_8819:HG2_PB_SVrefine2PB10Xhap12_4104:HG2_PB_SVrefine2Falcon2Bionano_2794:HG2_10X_SVrefine210Xhap12_4085;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4085:HG2_PB_SVrefine2Falcon2Bionano_2794:HG2_PB_SVrefine2PB10Xhap12_4104:HG2_PB_SVrefine2PBcRplusDovetail_8819;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0847397;ClusterMaxSizeDiff=0.0840215;ClusterMaxEditDist=0.186715;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=1367;DistBack=72031;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=5:22873808-22873810;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:133:1/1:0:31:0:33:./.:0:0:0:0:1/1:0:50:./.:19:169:.:1311:.
chr5	24278064	HG4_Ill_150bpfermikitraw_7545	A	AGTTTCTATCTAGTTTCATTTCCTTATTCAAATAGTTTTGCTTACATCCACTTCCATTGTGCTTACATCCACAATGAATATATAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23708:HG3_PB_HySA_8687:HG4_Ill_svaba_7339:HG4_Ill_250bpfermikitraw_7880:HG4_Ill_150bpfermikitraw_7545:HG3_Ill_svaba_7301:HG3_Ill_250bpfermikitraw_7533:HG3_Ill_150bpfermikitraw_7347:HG2_Ill_svaba_7225:HG2_Ill_250bpfermikitraw_7832:HG2_Ill_150bpfermikitraw_7313:HG4_Ill_manta_1397:HG3_Ill_manta_1309:HG2_Ill_manta_1604:HG2_PB_HySA_10518;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7313:HG2_Ill_250bpfermikitraw_7832:HG2_Ill_svaba_7225:HG3_Ill_150bpfermikitraw_7347:HG3_Ill_250bpfermikitraw_7533:HG3_Ill_svaba_7301:HG4_Ill_150bpfermikitraw_7545:HG4_Ill_250bpfermikitraw_7880:HG4_Ill_svaba_7339;NumExactMatchSVs=9;ClusterMaxShiftDist=0.192308;ClusterMaxSizeDiff=0.179487;ClusterMaxEditDist=0.205128;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=84;DistBack=-1;DistForward=42689;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=5:24278063-24278065;PctSeqSimilarity=0.8931;PctSizeSimilarity=0.8214;PctRecOverlap=0.8118;SizeDiff=15;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=84;MatchId=4342.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:1:38:0:20:./.:0:0:0:0:1/1:1:49:./.:.:.:.:.:.
chr5	26161946	HG3_Ill_GATKHC_9322	T	TATATATATATATATATATATATATATATATATATGTATATATATATATATAC	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_21091:HG3_PB_HySA_8701:HG3_Ill_manta_1314:HG3_Ill_Spiral_6154:HG3_Ill_Krunchall_7821:HG3_Ill_GATKHC_9322:HG3_Ill_GATKHCSBGrefine_3782:HG3_Ill_250bpfermikitraw_7544:HG3_Ill_150bpfermikitraw_7359:HG4_PB_assemblyticsfalcon_20669:HG4_Ill_GATKHC_9466:HG4_Ill_GATKHCSBGrefine_4013:HG4_Ill_150bpfermikitraw_7558:HG2_Ill_GATKHC_9349:HG2_Ill_GATKHCSBGrefine_3924:HG2_Ill_150bpfermikitraw_7326:HG3_PB_pbsv_5511:HG2_PB_pbsv_5678;NumClusterSVs=18;ExactMatchIDs=HG3_Ill_150bpfermikitraw_7359:HG3_Ill_250bpfermikitraw_7544:HG3_Ill_GATKHCSBGrefine_3782:HG3_Ill_GATKHC_9322:HG3_Ill_Krunchall_7821:HG3_Ill_Spiral_6154:HG3_Ill_manta_1314;NumExactMatchSVs=7;ClusterMaxShiftDist=0.127273;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.224138;PBcalls=5;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=10;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=25;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=5:26161945-26161948;PctSeqSimilarity=0.9636;PctSizeSimilarity=0.9286;PctRecOverlap=0.9298;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=4343.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:31:0|1:41:3:3:26:./.:0:0:0:0:0/1:26:6:./.:.:.:.:.:.
chr5	26204303	HG2_PB_assemblyticsPBcR_20447	A	ATATATACATATATATATATATATATATATACATATATATATACACATATATATACATATATATACATATATATATACATATATATATACATATATATACACATATATATACACACACACACACACACAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23711:HG2_PB_assemblyticsfalcon_21148:HG2_PB_assemblyticsPBcR_20447:HG3_PB_assemblyticsfalcon_21092:HG4_Ill_MetaSV_4105:HG2_PB_SVrefine2Falcon2Bionano_2802:HG2_PB_SVrefine2PBcRplusDovetail_8828:HG2_Ill_manta_1611:HG2_Ill_GATKHCSBGrefine_3926:HG3_PB_SVrefine2PBcRDovetail_2621:HG3_PB_SVrefine2Falcon1Dovetail_3526:HG2_PB_SVrefine2PB10Xhap12_4112:HG4_PB_SVrefine2Falcon1Dovetail_3463:HG2_PB_HySA_10538:HG4_PB_HySA_8428:HG3_PB_HySA_8703:HG2_10X_SVrefine210Xhap12_4099:HG4_PB_assemblyticsfalcon_20670;NumClusterSVs=18;ExactMatchIDs=HG2_PB_assemblyticsPBcR_20447:HG2_PB_assemblyticsfalcon_21148;NumExactMatchSVs=2;ClusterMaxShiftDist=0.316602;ClusterMaxSizeDiff=0.316602;ClusterMaxEditDist=0.324324;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=129;DistBack=0;DistForward=151;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=5:26204304-26204303;PctSeqSimilarity=0.9668;PctSizeSimilarity=0.9348;PctRecOverlap=0.9281;SizeDiff=-9;StartDistance=1;EndDistance=1;GTMatch=1;TruScore=94;MatchId=4344.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:1:33:0:8:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr5	26236091	HG3_PB_SVrefine2PBcRDovetail_2623	G	GTGTGGTGGTGGGTGGGTGTTATGGTGGGCAGGTGTTGTGGTGGACGGGTGTTGTGGTAGGCAGGTGTGGTGGGCAGGTGTTGTGGTGGGCAGGT	20	PASS	ClusterIDs=HG4_PB_pbsv_5718:HG2_PB_PB10Xdip_23712:HG3_PB_pbsv_5516:HG2_PB_pbsv_5683:HG4_PB_SVrefine2Falcon1Dovetail_3464:HG3_PB_SVrefine2PBcRDovetail_2623:HG2_PB_SVrefine2PBcRplusDovetail_8830:HG2_PB_SVrefine2PB10Xhap12_4114:HG2_PB_SVrefine2Falcon2Bionano_2804:HG4_PB_assemblyticsfalcon_20672:HG3_PB_assemblyticsfalcon_21094:HG3_PB_SVrefine2Falcon1Dovetail_3527:HG2_PB_assemblyticsPBcR_20450:HG2_Ill_GATKHCSBGrefine_3930:HG3_PB_HySA_8705:HG2_PB_HySA_10540:HG4_PB_HySA_8429;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2804:HG2_PB_SVrefine2PB10Xhap12_4114:HG2_PB_SVrefine2PBcRplusDovetail_8830:HG3_PB_SVrefine2PBcRDovetail_2623:HG4_PB_SVrefine2Falcon1Dovetail_3464;NumExactMatchSVs=5;ClusterMaxShiftDist=0.21229;ClusterMaxSizeDiff=0.21229;ClusterMaxEditDist=0.335196;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=94;DistBack=-1;DistForward=26;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=5:26236092-26236091;PctSeqSimilarity=0.9894;PctSizeSimilarity=0.9787;PctRecOverlap=0.9789;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4345.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:74:1/1:4:19:3:27:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr5	26335661	HG3_PB_assemblyticsfalcon_21095	AAGAGTACCATAGAT	CGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATAACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3557:HG2_PB_pbsv_5684:HG3_PB_assemblyticsfalcon_21095:HG3_PB_SVrefine2Falcon1Dovetail_3528:HG3_PB_pbsv_5517:HG2_PB_SVrefine2Falcon2Bionano_2805;NumClusterSVs=6;ExactMatchIDs=HG3_PB_assemblyticsfalcon_21095;NumExactMatchSVs=1;ClusterMaxShiftDist=0.139104;ClusterMaxSizeDiff=0.139104;ClusterMaxEditDist=0.244698;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=293;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:26335676-26335660;PctSeqSimilarity=0.9477;PctSizeSimilarity=0.9015;PctRecOverlap=0.9446;SizeDiff=-32;StartDistance=1;EndDistance=15;GTMatch=0;TruScore=93;MatchId=4346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:37:./.:18:7:14:8:./.:0:0:0:0:./.:45:4:0/1:10:12:.:.:.
chr5	27571994	HG2_Ill_GATKHCSBGrefine_3940	G	GGTGAAACCCCATCTTTACTAAGAAAGCAAAAATTAGCAGGATGTGGTGGCACGCATCTGTAGTCCCAGCTACTTGGGAGGCTAAGGTGGGAGGATCGCCTGAGCCCAGGAGGTAAAGACTGCA	20	PASS	ClusterIDs=HG4_PB_HySA_8440:HG2_PB_assemblyticsfalcon_21165:HG4_PB_pbsv_5723:HG2_Ill_breakscan11_3558:HG3_PB_pbsv_5526:HG3_PB_HySA_8719:HG2_PB_HySA_10557:HG4_Ill_MetaSV_4106:HG4_Ill_GATKHCSBGrefine_4021:HG3_Ill_GATKHCSBGrefine_3799:HG2_PB_SVrefine2Falcon2Bionano_2807:HG2_Ill_SpiralSDKrefine_13437:HG2_Ill_MetaSV_3933:HG2_Ill_GATKHCSBGrefine_3940:HG2_10X_SVrefine210Xhap12_4102:HG2_PB_pbsv_5693;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4102:HG2_Ill_GATKHCSBGrefine_3940:HG2_Ill_MetaSV_3933:HG2_Ill_SpiralSDKrefine_13437:HG2_PB_SVrefine2Falcon2Bionano_2807:HG3_Ill_GATKHCSBGrefine_3799:HG4_Ill_GATKHCSBGrefine_4021:HG4_Ill_MetaSV_4106;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.047619;ClusterMaxEditDist=0.210938;PBcalls=8;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=123;DistBack=51619;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=5:27571995-27571998;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:34:0|1:34:5:2:27:./.:0:0:0:0:0/1:12:7:./.:.:.:.:.:.
chr5	28818501	HG2_Ill_GATKHC_9388	A	AAGGAGGGGGAGGAAGAGGAAGAGGAAGAAGGAGGAGGCGGAGGAGGAGGAGAAGG	20	PASS	ClusterIDs=HG3_PB_pbsv_5529:HG2_PB_assemblyticsfalcon_21175:HG4_Ill_svaba_7373:HG3_PB_HySA_8733:HG3_Ill_svaba_7338:HG2_Ill_svaba_7264:HG2_PB_pbsv_5697:HG4_PB_HySA_8450:HG4_PB_assemblyticsfalcon_20694:HG4_PB_pbsv_5727:HG4_Ill_svaba_7372:HG4_Ill_GATKHC_9496:HG4_Ill_GATKHCSBGrefine_4027:HG4_Ill_150bpfermikitraw_7586:HG3_Ill_svaba_7337:HG3_Ill_GATKHC_9361:HG3_Ill_GATKHCSBGrefine_3802:HG2_Ill_svaba_7263:HG2_Ill_GATKHC_9388:HG2_Ill_GATKHCSBGrefine_3946:HG2_PB_HySA_10565;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3946:HG2_Ill_GATKHC_9388:HG2_Ill_svaba_7263:HG3_Ill_GATKHCSBGrefine_3802:HG3_Ill_GATKHC_9361:HG3_Ill_svaba_7337:HG4_Ill_150bpfermikitraw_7586:HG4_Ill_GATKHCSBGrefine_4027:HG4_Ill_GATKHC_9496:HG4_Ill_svaba_7372;NumExactMatchSVs=10;ClusterMaxShiftDist=0.165138;ClusterMaxSizeDiff=0.165138;ClusterMaxEditDist=0.25;PBcalls=8;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=19;DistForward=111122;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=46;REFWIDENED=5:28818500-28818548;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4349.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:25:./.:33:7:12:12:./.:0:0:0:0:./.:16:2:./.:.:.:.:.:.
chr5	31906276	HG2_Ill_GATKHCSBGrefine_3956	T	TGCCACCACGCCTGGCTAATTTTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGAATGGGCTCAATCTCCATTGATTACAGGGATTACAGGCATAAGCCACCACGCCCAGCCTTATTTTATTTTTTTGAGATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGGAGTGGTGTGTTCTTGGCTCACTGCAACTTCTGCCTCCCAGGTTCAAGCTATTCTCCAGCCTCAGACTCCCAAGTAGCCGGGATTACAGGTACATGCCACCACGCCCAGTTAATTTTTGTATTTTTAGTAGAGATGGGGTTTTACTATGTTGGCCAAGTTGGTCCAAACTCCTGAACTCAAGTGACAACCCGCCTTGGGCTCCCAAAGTGCTGGGATTACAGGCATGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4115:HG3_PB_assemblyticsfalcon_21133:HG4_Ill_Spiral_469:HG2_PB_pbsv_5708:HG3_PB_pbsv_5541:HG3_PB_HySA_8759:HG4_PB_HySA_8471:HG4_Ill_manta_1408:HG4_Ill_MetaSV_4112:HG4_Ill_GATKHCSBGrefine_4036:HG3_Ill_MetaSV_4124:HG3_Ill_GATKHCSBGrefine_3815:HG2_Ill_MetaSV_3942:HG2_Ill_GATKHCSBGrefine_3956:HG2_PB_assemblyticsfalcon_21204:HG4_PB_SVrefine2Falcon1Dovetail_3474:HG3_PB_SVrefine2Falcon1Dovetail_3540;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3956:HG2_Ill_MetaSV_3942:HG3_Ill_GATKHCSBGrefine_3815:HG3_Ill_MetaSV_4124:HG4_Ill_GATKHCSBGrefine_4036:HG4_Ill_MetaSV_4112:HG4_Ill_manta_1408;NumExactMatchSVs=7;ClusterMaxShiftDist=0.20025;ClusterMaxSizeDiff=0.20025;ClusterMaxEditDist=0.260325;PBcalls=8;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=407;DistBack=-15;DistForward=8;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=5:31906237-31906291;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:0|1:25:1:1:27:./.:0:0:0:0:0/1:29:16:0/1:10:46:.:.:.
chr5	32338583	HG2_Ill_MetaSV_3943	G	GCATGATGAAACTTCGGCTCACTCCTTGGCGCCTGCCTGATCCTCCAAATCACCACAGGACTATTCCTAGCCATGCACTACTCACCAGACGCCTCAACCGCCTTTTCATCAATCGCCCACATCACTCGAGACGTAAATTATGGCTGAGATACGGTTGTATAGGATTGCTTGAATGGCTGCTGTGTTGGCGTCTGCTCGGGCGTATCATCAACTGATGAGCAAGAAGGATATAATTCCTACGCCCTCTCAGCCGATGAACAGTTGGAATAGGTTGTTAGCGGTAACTAAGATT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23883:HG4_PB_pbsv_5742:HG2_PB_SVrefine2PB10Xhap12_4122:HG2_PB_pbsv_5709:HG2_10X_SVrefine210Xhap12_4120:HG3_PB_SVrefine2Falcon1Dovetail_3542:HG4_Ill_MetaSV_4113:HG4_Ill_GATKHCSBGrefine_4037:HG2_Ill_MetaSV_3943:HG2_Ill_GATKHCSBGrefine_3957:HG2_PB_assemblyticsfalcon_21208:HG3_PB_assemblyticsfalcon_21139:HG4_PB_SVrefine2Falcon1Dovetail_3477:HG4_PB_HySA_8476:HG2_PB_HySA_10596;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3957:HG2_Ill_MetaSV_3943:HG4_Ill_GATKHCSBGrefine_4037:HG4_Ill_MetaSV_4113;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0813559;ClusterMaxSizeDiff=0.0813559;ClusterMaxEditDist=0.233937;PBcalls=10;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=291;DistBack=-1;DistForward=31851;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=5:32338584-32338583;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4352.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:40:./.:18:10:9:16:./.:0:0:0:0:0/1:33:11:./.:.:.:.:.:.
chr5	33633334	HG2_PB_PB10Xdip_23945	G	GAAAAGTCTTCTTTTTTTTTTTTCTTTTTTTTATTTATTTATTTATTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGATTGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAGAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCGCCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTCCATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACAAAATGAAGGCAGAAATAAAGATCTTCTTTGAAACCAACGAGAATAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAGGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAATTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAAGAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTGTCTGTTTGCAGACGACATGATTGTTTATCTAGAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCTAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTGCAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAAT	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_23945:HG3_PB_pbsv_5551:HG4_PB_pbsv_5749:HG2_PB_HySA_10612:HG2_PB_pbsv_5714:HG4_PB_assemblyticsfalcon_20733:HG2_PB_assemblyticsfalcon_21220:HG3_PB_assemblyticsfalcon_21154:HG4_PB_HySA_8485:HG2_PB_HySA_10611:HG4_PB_SVrefine2Falcon1Dovetail_3483:HG2_PB_SVrefine2PB10Xhap12_4127:HG2_PB_SVrefine2Falcon2Bionano_2817:HG3_PB_SVrefine2Falcon1Dovetail_3550:HG3_PB_HySA_8776:HG2_PB_PB10Xdip_23946;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_23945:HG2_PB_PB10Xdip_23946;NumExactMatchSVs=2;ClusterMaxShiftDist=0.057004;ClusterMaxSizeDiff=0.057004;ClusterMaxEditDist=0.204097;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=5231;DistBack=820;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:33633335-33633348;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=0.9996;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4353.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:112:./.:0:4:0:9:./.:0:0:0:0:1/1:1:39:1/1:0:1300:.:5266:.
chr5	33827274	HG2_PB_SVrefine2Falcon1plusDovetail_9473	AAA	CTGAGACCACAACCTTGACCTCTATCAACTAGGATCAAGTCTTTTAGGAAGGTAGGAGTCAAGGAGGGTCAGTCTTATTTACATTGAAGAAATAGATTAGAAGTTACAGCAGGAACATTATACTTGTAGCTCAGGAAGATTGTGTTTTCTTTTCATCCACAGTACTAAAATATAAGACCCAAATATTTTTCCACTGCATATTTTTCTTTAGCGGTAATCAGGAAAACAGCTCAAGAAATAATAGCTGAGTTCAGGAGTTATACTGAAAAAGCCAGTCTTAGCTTTTCTAGACTTTAGTTTCTTCATCTGTAAAATGGCTAAATAATAATAGTTTCTACCTATAGGGCTCTTACAAAGATTAAATAGTGGAATCCAATGTTAGCAAACTATGGTCCATGGGCCAAACCTGGCCCATCTGTAAATAAAGTTCTATGAGAACGGAGTCATGGCCATTTGTTTACGCATTGTCTATGCTGTTTCACCCTGTAGCAGGAGAGTTGGGTAATTGTGAGAGAGACCACATGGGCCCATAAAGCCTGAAATATTTACTATCTGGCTTTTTACAAAAAAAAAACTCTCCCACCCCTGATACAATCCACATACATTATTTTGTACAAGTCCTAGTATGTAAACACTTAGCTATTGTTTTCTATTTAGAGTTTTGTATTTTGTGACTTGCGAAAATAAATGTGTGAATTGTAAGGCAATGTAAAGCTGAACAATTGACAATGAAAACTAGATTCTGGCATCAGGTTCTCAGAATATTTGATTTCAAGGAAAAGTTACCCAGACATATAAAATCATTAAGAACAGAGCTACTTTGACTGGAGCCATGGTGGGGGACCTGGAAAAATACTATATCAAACATACACAATTACGTAGGTGCTCCTTAAAACCTAAAGAAATTAATTGAAAACATAAAATCTAAAGCCTGAATGCCAGAGGGCTTTTTCTTTGTATTTCATGTAACTTTATACTCTCACCTATAAGCCACAAGAGCAAATAATGGCAATAGCATAAGGTAAGTAATTACTAATATCACACCTTTATACACTTATTATATAACCACAAAATTTTTTTCTTAAATAATATCATTTCTTGAATAAGGGAAGTAAACAGATGGATTCTCAAGTCACTCTGTTTTCATGAAGCTTTCCCCTTACCTGATATTTTATACTGCATGCATTTCCAAAAGGAATACTTTGCAGAAAAGAAATATAGCACTTGTTTGGCAACTCTTGAGAATTGACTCAGAAGGCAACCTTGACATCTCAGGCAAGATCTTTCTTCTTTACAGCAAGATGACGACATTTCTGATCCCAAGCCAAGGTCAGTGCTAGCAGGAGATGATGCAGAAAAAGGCTGGGCATACACAGGGGCAGAAAAACAGCCCCAGGCTAGGAGGACCTGGAAAATGTAACTGAAAAACTATTCTTCAAAGCCAGTTGTGAACAGCAGCAACCCCATCCAGGAAGACTACATGGTTACACTTGGCAGGCTGTGCGGAACAGATGAGGCAGTGTGACACAGTCAAGTCACCCACAAGAACGTGGCATTTTGTGGTGTTTGAAACATTTCAGCTAGATAAGCCTAAATTGGCTTCCTTTATAGCAAAACTACCTGCCACTCATTATATTCATGCCAATATCAGGTTCCTCATGGGGCATGCTATGACATATTTACCCCCAGACCAACTCAGGATTTAAAAGGAAGATGAGATATTTATAGGCTAGGAATTCTCTAATGGACACGCTAATGAACAAATAAATGTGAAACCATCTCCTAAAGATCAAGGATACCAGAAAAAAAAAAAAAACTGATCCCTAGGTCAGTGTGATATGCCGACTTCCAAGATGGCTCCCAAGATTCCAAGCCCTGGAGTAGGCACGACTCCCAGTCATTCAAAGGAACACTAATCTACATGCTGTGTGAAGGGACTGTGCTGATGTAAGTAGGGTTCCAAAACAGTCGACCTTAAAATACGGAGATTATCAGGGTGACCATGGCCTAATCACAGAGCTCTTT	20	PASS	ClusterIDs=HG4_Ill_Spiral_471:HG4_PB_pbsv_5750:HG2_PB_HySA_10613:HG3_PB_pbsv_5552:HG2_PB_SVrefine2Falcon1plusDovetail_9473:HG2_PB_SVrefine2PB10Xhap12_4128:HG3_PB_SVrefine2Falcon1Dovetail_3551;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9473;NumExactMatchSVs=1;ClusterMaxShiftDist=0.171143;ClusterMaxSizeDiff=0.171143;ClusterMaxEditDist=0.255397;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=2022;DistBack=0;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:33827277-33827273;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9975;PctRecOverlap=0.9985;SizeDiff=-5;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=99;MatchId=4354.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:80:./.:30:20:10:15:./.:0:0:0:0:0/1:25:25:0/1:68:102:.:2015:.
chr5	34459552	HG2_Ill_SVrefine2DISCOVARplusDovetail_10232	T	TAAGATTTAACAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCCAGACCATCCTGGCTAACATGGTGAAACCCTGTCTCCACTAAAAATACAAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATTGAGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23952:HG2_PB_pbsv_5718:HG4_PB_pbsv_5754:HG3_PB_HySA_8787:HG2_PB_assemblyticsPBcR_20516:HG2_PB_HySA_10625:HG3_PB_pbsv_5555:HG2_Ill_breakscan11_3560:HG4_PB_HySA_8496:HG3_PB_HySA_8786:HG3_PB_SVrefine2Falcon1Dovetail_3552:HG4_PB_SVrefine2PBcRDovetail_2870:HG3_PB_SVrefine2PBcRDovetail_2630:HG2_PB_SVrefine2PB10Xhap12_4129:HG2_PB_SVrefine2Falcon2Bionano_2819:HG2_Ill_MetaSV_3947:HG4_Ill_SVrefine2DISCOVARDovetail_4190:HG4_Ill_MetaSV_4119:HG4_Ill_GATKHCSBGrefine_4046:HG2_Ill_SVrefine2DISCOVARplusDovetail_10232:HG2_Ill_GATKHCSBGrefine_3965:HG2_10X_SVrefine210Xhap12_4127:HG2_PB_SVrefine2Falcon1plusDovetail_9474;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4127:HG2_Ill_GATKHCSBGrefine_3965:HG2_Ill_SVrefine2DISCOVARplusDovetail_10232:HG4_Ill_GATKHCSBGrefine_4046:HG4_Ill_MetaSV_4119:HG4_Ill_SVrefine2DISCOVARDovetail_4190;NumExactMatchSVs=6;ClusterMaxShiftDist=0.117284;ClusterMaxSizeDiff=0.117284;ClusterMaxEditDist=0.19403;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=321;DistBack=26869;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=5:34459553-34459565;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:./.:0:0:0:0:./.:0:0:0:0:1/1:0:18:1/1:2:45:.:.:.
chr5	35583985	HG2_Ill_150bpfermikitraw_7421	T	TGGAATGGAGGAATGAAGTATGTTGAATTGAGAAACATCCAGAGGGACGATTATGGTA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7421:HG2_PB_pbsv_5723:HG4_PB_HySA_8504:HG2_PB_HySA_10633:HG4_PB_pbsv_5758:HG4_PB_SVrefine2PBcRDovetail_2873:HG3_PB_pbsv_5564:HG4_Ill_svaba_7429:HG4_Ill_SVrefine2DISCOVARDovetail_4193:HG4_Ill_Krunchall_8371:HG4_Ill_GATKHC_9574:HG4_Ill_GATKHCSBGrefine_4051:HG4_Ill_250bpfermikitraw_7985:HG4_Ill_150bpfermikitraw_7655:HG3_PB_SVrefine2PBcRDovetail_2632:HG3_PB_SVrefine2Falcon1Dovetail_3557:HG3_Ill_svaba_7397:HG3_Ill_Krunchall_7912:HG3_Ill_GATKHC_9437:HG3_Ill_GATKHCSBGrefine_3829:HG3_Ill_250bpfermikitraw_7630:HG3_Ill_150bpfermikitraw_7459:HG2_PB_SVrefine2Falcon2Bionano_2822:HG2_Ill_svaba_7319:HG2_Ill_SVrefine2DISCOVARplusDovetail_10235:HG2_Ill_Krunchall_8100:HG2_Ill_GATKHC_9456:HG2_Ill_GATKHCSBGrefine_3971:HG2_Ill_250bpfermikitraw_7933;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7421:HG4_PB_SVrefine2PBcRDovetail_2873:HG4_Ill_svaba_7429:HG4_Ill_SVrefine2DISCOVARDovetail_4193:HG4_Ill_Krunchall_8371:HG4_Ill_GATKHC_9574:HG4_Ill_GATKHCSBGrefine_4051:HG4_Ill_250bpfermikitraw_7985:HG4_Ill_150bpfermikitraw_7655:HG3_PB_SVrefine2PBcRDovetail_2632:HG3_PB_SVrefine2Falcon1Dovetail_3557:HG3_Ill_svaba_7397:HG3_Ill_Krunchall_7912:HG3_Ill_GATKHC_9437:HG3_Ill_GATKHCSBGrefine_3829:HG3_Ill_250bpfermikitraw_7630:HG3_Ill_150bpfermikitraw_7459:HG2_PB_SVrefine2Falcon2Bionano_2822:HG2_Ill_svaba_7319:HG2_Ill_SVrefine2DISCOVARplusDovetail_10235:HG2_Ill_Krunchall_8100:HG2_Ill_GATKHC_9456:HG2_Ill_GATKHCSBGrefine_3971:HG2_Ill_250bpfermikitraw_7933;NumExactMatchSVs=24;ClusterMaxShiftDist=0.116667;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.311475;PBcalls=9;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=57;DistBack=5394;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=5:35583986-35584051;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4357.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:33:0|1:35:2:5:26:./.:0:0:0:0:0/1:17:37:./.:.:.:.:.:.
chr5	35752764	HG4_Ill_MetaSV_4123	G	GATATCTTATTAAACAATAAATATTTCATTGCAATGAATAAGATTATAATAATAGTTTTCATTAATTGAGGAATTATTGCATGTGCTTTATATGCACCAGCTAATTATTTCTACATAACATATCCAAAAGGTAAGTAGTATTATGTCCGTTTTACAGATAAAGTA	20	PASS	ClusterIDs=HG2_PB_pbsv_5729:HG2_PB_PB10Xdip_23981:HG3_PB_pbsv_5570:HG4_PB_SVrefine2PBcRDovetail_2876:HG4_PB_SVrefine2Falcon1Dovetail_3490:HG4_Ill_manta_1417:HG4_Ill_SVrefine2DISCOVARDovetail_4199:HG4_Ill_MetaSV_4123:HG4_Ill_GATKHCSBGrefine_4058:HG4_Ill_Cortex_2909:HG3_PB_SVrefine2Falcon1Dovetail_3562:HG3_Ill_manta_1333:HG3_Ill_Spiral_6215:HG3_Ill_GATKHCSBGrefine_3832:HG3_Ill_Cortex_2922:HG3_Ill_250bpfermikitraw_7634:HG3_Ill_150bpfermikitraw_7463:HG2_PB_SVrefine2PBcRplusDovetail_8843:HG2_PB_SVrefine2PB10Xhap12_4138:HG2_PB_SVrefine2Falcon2Bionano_2826:HG2_PB_SVrefine2Falcon1plusDovetail_9483:HG2_Ill_manta_1632:HG2_Ill_SpiralSDKrefine_13487:HG2_Ill_SVrefine2DISCOVARplusDovetail_10238:HG2_Ill_MetaSV_3952:HG2_Ill_GATKHCSBGrefine_3978:HG2_Ill_Cortex_7016:HG2_10X_SVrefine210Xhap12_4138:HG2_PB_assemblyticsPBcR_20532:HG4_PB_pbsv_5764:HG2_Ill_breakscan11_3561;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4138:HG2_Ill_Cortex_7016:HG2_Ill_GATKHCSBGrefine_3978:HG2_Ill_MetaSV_3952:HG2_Ill_SVrefine2DISCOVARplusDovetail_10238:HG2_Ill_SpiralSDKrefine_13487:HG2_Ill_manta_1632:HG2_PB_SVrefine2Falcon1plusDovetail_9483:HG2_PB_SVrefine2Falcon2Bionano_2826:HG2_PB_SVrefine2PB10Xhap12_4138:HG2_PB_SVrefine2PBcRplusDovetail_8843:HG3_Ill_150bpfermikitraw_7463:HG3_Ill_250bpfermikitraw_7634:HG3_Ill_Cortex_2922:HG3_Ill_GATKHCSBGrefine_3832:HG3_Ill_Spiral_6215:HG3_Ill_manta_1333:HG3_PB_SVrefine2Falcon1Dovetail_3562:HG4_Ill_Cortex_2909:HG4_Ill_GATKHCSBGrefine_4058:HG4_Ill_MetaSV_4123:HG4_Ill_SVrefine2DISCOVARDovetail_4199:HG4_Ill_manta_1417:HG4_PB_SVrefine2Falcon1Dovetail_3490:HG4_PB_SVrefine2PBcRDovetail_2876;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0654762;ClusterMaxSizeDiff=0.0534125;ClusterMaxEditDist=0.22807;PBcalls=12;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=164;DistBack=1565;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:35752765-35752765;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:91:1/1:0:54:0:22:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr5	36562456	HG2_PB_SVrefine2PBcRplusDovetail_8845	A	ATTTGAGACCGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCTATCTCAGCTCACTGCAACCTCTGCCTCCCAGATTCAAGTGATTCTCCTGCCTCAGCCTCCCTGGTAGCTGGGATTACAGGCATGTGCCACCACGCCCAGCTAATTTTCTGTTTTTAGTAGAGACGGGATTTCACCGTGTTGGTCAGGCTGGTTTCTAACTCCTGACCTCAGGTGATCCGCCTACCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGCGAGCCACCACACTCAGCCCATAATACTATCTTTTAAAGCAATTTATTTTCCCAAAATTGTAAAAGTACTACTATATCATTGTAAAAATATTAATTGCAGGAAACATAAAGAAAAAGTAGAAATCAAAGTTATTTACATTTTAACCTCCAATAATTACTATTAATTTTTTTTTGGAGCGGGGAGGGATGGAATCTCCCACTGTCTCCCAGGCTGGAATGCAGGGGTGCTATCTCAGCTTACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGGTGTGCACCACCATGCCCAGCTAATGTTTGTATTTTTAGTAGAGAGGAGGTTTCACCGTGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTTATCGGCCTGCCTGGGCCTCCCAAAGTGCTAGGATTCTTTAAATATTTTGATGTACTTCTTTTCATGTTTTCTTTCTTTCTTTTATAACAGATATTTTGCTTACTTTTCTTTCCTCTTAATGTCACAAAATGAGCATTTCTTCTGCTGTTATCACTTTTTAAATAAAATATTTTTTTAAATCACTGGTTATAAAGCAAGTTGCACTGCCAAGTTTTTCTTAGGAGAATATGTAAAAATTCTCTTTTCCATTTTTTTTGTGTTTTCAATCAAGTAACATGGTATGTAGTTAGGCTTAGAAAATATGATTTATGAAGATTATATAATATTCTGTAAAATGGATATTCCACAATTTCATCAATCCACCTTTTTCTTTAAAACTGATTCATTCAACAATTTTTTACTAACACTATGTGACAGGCACTGTTCTAGGTTTTGGAATGAGGAAGTCCCTGCCTTAATGGAGATTACATCTTAATGGGGTTGTCAGTTAATTTTTGAAAAATTATCGAATTGTAATGTTGAGTGTTTTCTTCAGCAATCAAAGCTGAGCATAAAGGAGTGTGAGTGACGGGGGCGGCAGGAGTGGACCGACATAGATGTGGGAGGTCACAGAAGTCACTCTGAGCAAGTGAAGGATGTGGAGGAGAGGGTTCCACGCAGACCTGGGGAAGCGCATTCCAGGCTGAGGGAACAGCAAGTGTAAGGCCTGAGACAGGAACAACCGTGGTAAGGAGGCTCCTTTGGCGATGCACAGAGCGGCGGGGAAAGTGGTAGGTGGTGTAGTCATGGAGGCAGGCAGGGCCATCGTGCAGGGCCTTGCAGACCACAGGAAGGAGCAGGAGTTCATTTTCTGTGTGATGGAAAGCCCAGAGGAGGAGCACTATGATCAAATTTACTTTCTCTTTTTTTTTTCTTTTTTTCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2828:HG2_PB_pbsv_5731:HG3_PB_SVrefine2Falcon1Dovetail_3564:HG4_PB_pbsv_5767:HG4_PB_SVrefine2PBcRDovetail_2878:HG4_Ill_SVrefine2DISCOVARDovetail_4202:HG2_PB_SVrefine2PBcRplusDovetail_8845:HG2_10X_SVrefine210Xhap12_4143:HG2_PB_SVrefine2Falcon1plusDovetail_9485:HG4_PB_SVrefine2Falcon1Dovetail_3492:HG4_PB_HySA_8516:HG2_PB_HySA_10663:HG3_PB_SVrefine2PBcRDovetail_2637;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4143:HG2_PB_SVrefine2PBcRplusDovetail_8845:HG4_Ill_SVrefine2DISCOVARDovetail_4202:HG4_PB_SVrefine2PBcRDovetail_2878;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0582584;ClusterMaxSizeDiff=0.0556931;ClusterMaxEditDist=0.246005;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1592;DistBack=38865;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=286;REFWIDENED=5:36562457-36552684;PctSeqSimilarity=0.9991;PctSizeSimilarity=1;PctRecOverlap=0.9849;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=99;MatchId=4359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:57:0|1:37:1:0:35:./.:0:0:0:0:0/1:22:25:0/1:45:121:.:1507:.
chr5	36792604	HG2_PB_HySA_10665	T	TAGAAATCAGTTCACTGGGCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAATCCCAGCTACTCGGAGGCTGAGGCAGGAGAATGGCATGAACCCAAGAGGCGGAGCTTGCAGTGAGCGGGATAGCGCCACTGCAGTCCAGCTTGGGCGAAAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_10665:HG2_PB_pbsv_5732:HG2_PB_SVrefine2Falcon2Bionano_2829:HG4_PB_pbsv_5768:HG2_PB_SVrefine2Falcon1plusDovetail_9486;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_10665;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0439239;ClusterMaxSizeDiff=0.0380673;ClusterMaxEditDist=0.222865;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=336;DistBack=113056;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:36792605-36792620;PctSeqSimilarity=0.9911;PctSizeSimilarity=0.9941;PctRecOverlap=0.9941;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:48:0|1:37:1:0:41:./.:0:0:0:0:0/1:34:6:0/1:7:24:.:.:.
chr5	38194322	HG4_Ill_250bpfermikitraw_8003	C	CTTACAATCATGGCAGGAGGTGAAGGGGAAGCAAGTCACATCTTACTTGGCGGCAGGAGAGGGAGACAGAGAGAGGAAAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4153:HG2_PB_pbsv_5743:HG4_Ill_GATKHC_9603:HG4_PB_pbsv_5779:HG4_Ill_GATKHCSBGrefine_4068:HG4_Ill_250bpfermikitraw_8003:HG2_Ill_Krunchall_8116:HG2_Ill_GATKHC_9476:HG2_PB_HySA_10677:HG4_PB_SVrefine2PBcRDovetail_2884:HG4_PB_HySA_8527:HG2_PB_SVrefine2Falcon2Bionano_2836;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHC_9476:HG2_Ill_Krunchall_8116:HG4_Ill_250bpfermikitraw_8003:HG4_Ill_GATKHCSBGrefine_4068:HG4_Ill_GATKHC_9603;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0617284;ClusterMaxSizeDiff=0.0368098;ClusterMaxEditDist=0.230303;PBcalls=6;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=79;DistBack=31179;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=148;REFWIDENED=5:38194316-38194463;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:22:0|1:36:0:1:20:./.:0:0:0:0:0/1:19:7:./.:.:.:.:.:.
chr5	39423436	HG2_Ill_GATKHCSBGrefine_3988	A	ACTCTCCTTGTTGTCTTAAGTGTGGCATTATTTCCACAAGTCCAGCACTCCACCAAAAAGGTCCTTTTCCAAAGATTTCAAAGGGCTCAAGC	20	PASS	ClusterIDs=HG2_PB_pbsv_5749:HG4_PB_pbsv_5788:HG3_PB_pbsv_5584:HG2_PB_assemblyticsfalcon_21266:HG2_Ill_breakscan11_3563:HG2_PB_PB10Xdip_24026:HG2_PB_PB10Xdip_24025:HG4_PB_SVrefine2PBcRDovetail_2886:HG4_Ill_svaba_7456:HG4_Ill_manta_1420:HG4_Ill_SVrefine2DISCOVARDovetail_4216:HG4_Ill_Krunchall_8409:HG4_Ill_GATKHC_9617:HG4_Ill_GATKHCSBGrefine_4071:HG4_Ill_Cortex_2911:HG4_Ill_250bpfermikitraw_8017:HG4_Ill_150bpfermikitraw_7691:HG3_PB_SVrefine2PBcRDovetail_2645:HG3_Ill_svaba_7428:HG3_Ill_manta_1337:HG3_Ill_Spiral_6228:HG3_Ill_Krunchall_7939:HG3_Ill_GATKHC_9470:HG3_Ill_GATKHCSBGrefine_3846:HG3_Ill_Cortex_2923:HG3_Ill_250bpfermikitraw_7664:HG3_Ill_150bpfermikitraw_7486:HG2_PB_SVrefine2PBcRplusDovetail_8854:HG2_PB_SVrefine2PB10Xhap12_4151:HG2_PB_SVrefine2Falcon2Bionano_2839:HG2_PB_SVrefine2Falcon1plusDovetail_9497:HG2_Ill_svaba_7343:HG2_Ill_manta_1635:HG2_Ill_SpiralSDKrefine_13502:HG2_Ill_SVrefine2DISCOVARplusDovetail_10252:HG2_Ill_Krunchall_8128:HG2_Ill_GATKHC_9487:HG2_Ill_GATKHCSBGrefine_3988:HG2_Ill_Cortex_7025:HG2_Ill_250bpfermikitraw_7966:HG2_Ill_150bpfermikitraw_7446:HG2_10X_SVrefine210Xhap12_4156:HG4_PB_HySA_8541:HG2_PB_HySA_10690;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4156:HG2_Ill_150bpfermikitraw_7446:HG2_Ill_250bpfermikitraw_7966:HG2_Ill_Cortex_7025:HG2_Ill_GATKHCSBGrefine_3988:HG2_Ill_GATKHC_9487:HG2_Ill_Krunchall_8128:HG2_Ill_SVrefine2DISCOVARplusDovetail_10252:HG2_Ill_SpiralSDKrefine_13502:HG2_Ill_manta_1635:HG2_Ill_svaba_7343:HG2_PB_SVrefine2Falcon1plusDovetail_9497:HG2_PB_SVrefine2Falcon2Bionano_2839:HG2_PB_SVrefine2PB10Xhap12_4151:HG2_PB_SVrefine2PBcRplusDovetail_8854:HG3_Ill_150bpfermikitraw_7486:HG3_Ill_250bpfermikitraw_7664:HG3_Ill_Cortex_2923:HG3_Ill_GATKHCSBGrefine_3846:HG3_Ill_GATKHC_9470:HG3_Ill_Krunchall_7939:HG3_Ill_Spiral_6228:HG3_Ill_manta_1337:HG3_Ill_svaba_7428:HG3_PB_SVrefine2PBcRDovetail_2645:HG4_Ill_150bpfermikitraw_7691:HG4_Ill_250bpfermikitraw_8017:HG4_Ill_Cortex_2911:HG4_Ill_GATKHCSBGrefine_4071:HG4_Ill_GATKHC_9617:HG4_Ill_Krunchall_8409:HG4_Ill_SVrefine2DISCOVARDovetail_4216:HG4_Ill_manta_1420:HG4_Ill_svaba_7456:HG4_PB_SVrefine2PBcRDovetail_2886;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0855615;ClusterMaxSizeDiff=0.0534759;ClusterMaxEditDist=0.212766;PBcalls=14;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=21;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=91;DistBack=64231;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=5:39423437-39423439;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:0:26:0:10:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr5	39445188	HG3_PB_SVrefine2Falcon1Dovetail_3568	C	TGTATGTGTATATACACATATATGTGTATATATACATATACACATATATGTGTACATATATACACATATGTGTGTATATATACATATACACATATATGTGTACATATATACACATATGTGTATATATACATATACACATATATGTGTACATATATACACATATGTGTATATATACATATACACATATATGTGTACATATATACACATATATGTGTATATATACATATACACATATATGTGTACATATATACACATATATGTGTATATATACATATACACATATATGTGTACATATATACACATATATGTGTATATATACATATACACATATATGTGTACATATATACACATATATGTGTATTATACATATACACATATATGTGTACATATATACACATATATGTGTATATATACATATACACATATATGTGTACATATATACACATATATGTGTATATATACATATACATATATGTGTACATATATACACATATATGTGTATATATACATATAACATATATGTGTATATATACACATATATGTGTATATATACATATATACACATATATGTGTATATATCATATTACATATATGTGTATATATACATATA	10	PASS	ClusterIDs=HG4_PB_pbsv_5789:HG3_PB_SVrefine2Falcon1Dovetail_3568:HG3_PB_SVrefine2Falcon1Dovetail_3569:HG3_PB_assemblyticsfalcon_21205:HG3_PB_assemblyticsfalcon_21204:HG4_PB_HySA_8545:HG2_PB_pbsv_5750;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_3568;NumExactMatchSVs=1;ClusterMaxShiftDist=0.222603;ClusterMaxSizeDiff=0.222603;ClusterMaxEditDist=0.339496;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=609;DistBack=-1;DistForward=20;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=288;REFWIDENED=5:39444943-39445230;PctSeqSimilarity=0.9428;PctSizeSimilarity=0.8966;PctRecOverlap=0.8982;SizeDiff=63;StartDistance=25;EndDistance=25;GTMatch=0;TruScore=91;MatchId=4363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:25:1:2:25:./.:0:0:0:0:0/0:34:1:0/1:33:60:.:.:.
chr5	39499670	HG2_Ill_GATKHC_9490	T	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTTTCCTTCCTTCCTTCCGTCCTTTCCCTCCCTCCCTCCC	20	PASS	ClusterIDs=HG4_PB_pbsv_5790:HG2_PB_SVrefine2Falcon2Bionano_2840:HG2_PB_assemblyticsfalcon_21267:HG2_PB_SVrefine2Falcon1plusDovetail_9498:HG4_PB_SVrefine2PBcRDovetail_2887:HG2_PB_HySA_10692:HG2_PB_HySA_10691:HG2_PB_pbsv_5751:HG3_PB_pbsv_5586:HG3_Ill_GATKHC_9473:HG3_PB_SVrefine2PBcRDovetail_2646:HG3_Ill_manta_1338:HG3_Ill_GATKHC_9474:HG3_Ill_GATKHCSBGrefine_3847:HG2_PB_SVrefine2PBcRplusDovetail_8855:HG2_Ill_GATKHC_9491:HG2_10X_SVrefine210Xhap12_4157:HG4_Ill_GATKHC_9621:HG4_Ill_GATKHC_9620:HG4_Ill_SVrefine2DISCOVARDovetail_4217:HG4_Ill_250bpfermikitraw_8018:HG2_PB_SVrefine2PB10Xhap12_4153:HG2_Ill_SVrefine2DISCOVARplusDovetail_10253:HG2_Ill_GATKHC_9490:HG2_PB_PB10Xdip_24027:HG2_PB_PB10Xdip_24028;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHC_9490:HG2_Ill_SVrefine2DISCOVARplusDovetail_10253:HG2_PB_SVrefine2PB10Xhap12_4153:HG4_Ill_250bpfermikitraw_8018:HG4_Ill_SVrefine2DISCOVARDovetail_4217;NumExactMatchSVs=5;ClusterMaxShiftDist=0.396476;ClusterMaxSizeDiff=0.396476;ClusterMaxEditDist=0.396476;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=115;DistBack=-1;DistForward=7;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=172;REFWIDENED=5:39499650-39499821;PctSeqSimilarity=0.9748;PctSizeSimilarity=0.9652;PctRecOverlap=0.9391;SizeDiff=4;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=95;MatchId=4364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:1:16:1:31:./.:0:0:0:0:1/1:1:24:./.:.:.:.:.:.
chr5	40181649	HG4_Ill_MetaSV_4128	G	GAACACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_8556:HG2_PB_pbsv_5754:HG4_PB_assemblyticsfalcon_20790:HG3_PB_pbsv_5589:HG2_PB_assemblyticsfalcon_21275:HG4_PB_SVrefine2PBcRDovetail_2888:HG4_PB_pbsv_5793:HG4_Ill_MetaSV_4128:HG3_PB_SVrefine2PBcRDovetail_2647:HG3_Ill_MetaSV_4139:HG3_Ill_GATKHCSBGrefine_3848:HG2_Ill_GATKHCSBGrefine_3989:HG2_PB_SVrefine2PBcRplusDovetail_8856:HG2_PB_SVrefine2PB10Xhap12_4154:HG2_PB_SVrefine2Falcon2Bionano_2841:HG2_PB_SVrefine2Falcon1plusDovetail_9499:HG2_Ill_MetaSV_3955:HG2_10X_SVrefine210Xhap12_4161:HG2_PB_PB10Xdip_24032:HG2_PB_PB10Xdip_24031;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3989:HG3_Ill_GATKHCSBGrefine_3848:HG3_Ill_MetaSV_4139:HG3_PB_SVrefine2PBcRDovetail_2647:HG4_Ill_MetaSV_4128:HG4_PB_SVrefine2PBcRDovetail_2888;NumExactMatchSVs=6;ClusterMaxShiftDist=0.108626;ClusterMaxSizeDiff=0.108626;ClusterMaxEditDist=0.245283;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=308;DistBack=13413;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=5:40181650-40181658;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:19:0:32:./.:0:0:0:0:1/1:0:20:1/1:1:61:.:.:.
chr5	40953957	HG4_Ill_manta_1422	A	AACATAAACCATGTACCATTATTGTGTATAAATAAAAAATAAAAAAACAAAAACATGTACCAT	20	PASS	ClusterIDs=HG4_PB_pbsv_5797:HG2_PB_PB10Xdip_24034:HG2_PB_assemblyticsfalcon_21282:HG2_PB_PB10Xdip_24033:HG2_Ill_breakscan11_3564:HG4_PB_assemblyticsfalcon_20798:HG4_Ill_svaba_7467:HG4_Ill_manta_1422:HG4_Ill_Krunchall_8426:HG4_Ill_GATKHC_9639:HG4_Ill_GATKHCSBGrefine_4074:HG4_Ill_250bpfermikitraw_8034:HG4_Ill_150bpfermikitraw_7707:HG3_Ill_svaba_7436:HG3_Ill_manta_1342:HG3_Ill_Spiral_6242:HG3_Ill_Krunchall_7955:HG3_Ill_GATKHC_9489:HG3_Ill_GATKHCSBGrefine_3854:HG3_Ill_250bpfermikitraw_7680:HG3_Ill_150bpfermikitraw_7502:HG2_Ill_svaba_7351:HG2_Ill_manta_1640:HG2_Ill_SpiralSDKrefine_13512:HG2_Ill_Krunchall_8143:HG2_Ill_GATKHC_9510:HG2_Ill_GATKHCSBGrefine_3994:HG2_Ill_250bpfermikitraw_7982:HG2_Ill_150bpfermikitraw_7463:HG2_PB_pbsv_5761:HG3_PB_HySA_8833:HG2_PB_HySA_10705;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7463:HG2_Ill_250bpfermikitraw_7982:HG2_Ill_GATKHCSBGrefine_3994:HG2_Ill_GATKHC_9510:HG2_Ill_Krunchall_8143:HG2_Ill_SpiralSDKrefine_13512:HG2_Ill_manta_1640:HG2_Ill_svaba_7351:HG3_Ill_150bpfermikitraw_7502:HG3_Ill_250bpfermikitraw_7680:HG3_Ill_GATKHCSBGrefine_3854:HG3_Ill_GATKHC_9489:HG3_Ill_Krunchall_7955:HG3_Ill_Spiral_6242:HG3_Ill_manta_1342:HG3_Ill_svaba_7436:HG4_Ill_150bpfermikitraw_7707:HG4_Ill_250bpfermikitraw_8034:HG4_Ill_GATKHCSBGrefine_4074:HG4_Ill_GATKHC_9639:HG4_Ill_Krunchall_8426:HG4_Ill_manta_1422:HG4_Ill_svaba_7467:HG4_PB_assemblyticsfalcon_20798;NumExactMatchSVs=24;ClusterMaxShiftDist=0.196721;ClusterMaxSizeDiff=0.196721;ClusterMaxEditDist=0.245902;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=5:40953956-40953959;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4366.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:1:26:0:12:./.:0:0:0:0:1/1:0:51:./.:.:.:.:.:.
chr5	42089635	HG2_PB_assemblyticsfalcon_21290	C	AACAAACAAACAAACAAACAAACAAATTAGCTGGGTGTGGTGGCACGTGCCTGTAATTCCAGCTATTAGAGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATGGCACCATTGCACTCAGACTGGGTGAAAGGGCAAGACTTTGTCTCAAAAAAAAAAAAAAGTTACTGAAAGAAAAGGTACTATTGTGCAAGGAACAGGTCTGAGGATTATTTGTCCTGGTTGACAGAAAAAAAATGTATGTTGGCTTTGTTACTCCAGTACTTTGGTTTTAAGCATCTATTTAAAAAATTATAGAAGTTAAATAAATATTTGGAAGGATCTTGCTTTTTTCTTATTATTTTAATTGTTTATAACTATAAACTTAGAAGCATTTTAATCACAGTGTTTCTACATGTACTATTTGTAATATTTGTAGTACTGCTTACTATTTCAATTTATTTCAGATTGTGAGACTAACTTGGCAGTATGTAAAATAAAAATCACTCTTTTACTGAAACCTAAACCTACCAATTGAATTTGTTGTTGTCGTTTTTTTTAAAGAATAAAAAGGGGGTAACAATGTCGAACTTTATCTGAGCCCTGTGCTTCCACTATATTCTGTTCTAAGAAATGGCAAACCTAAAAAGGCCACTCTATTGCCCTTACATAATCCAAGATAAGAGTCACCTGTACCCTTCCTCAATGACTCAGATGAAACAAACCTACACTTCCTCAGGGACTCATAGGGCATATTTCCATCCTTTGTCAGTGACTCAGATGGTACCCATCTCCATCATTTGCAGGAGCTCAGATAGAACTCATCTCTACCCTT	20	PASS	ClusterIDs=HG2_Ill_Spiral_422:HG4_PB_HySA_8567:HG3_PB_HySA_8841:HG2_PB_HySA_10714:HG4_Ill_GATKHCSBGrefine_4076:HG3_Ill_GATKHCSBGrefine_3857:HG2_Ill_GATKHCSBGrefine_3997:HG4_PB_assemblyticsfalcon_20803:HG4_PB_SVrefine2PBcRDovetail_2891:HG4_Ill_SVrefine2DISCOVARDovetail_4230:HG3_PB_assemblyticsfalcon_21224:HG3_PB_SVrefine2PBcRDovetail_2653:HG3_PB_SVrefine2Falcon1Dovetail_3572:HG2_PB_assemblyticsfalcon_21290:HG2_PB_SVrefine2PBcRplusDovetail_8861:HG2_PB_SVrefine2PB10Xhap12_4162:HG2_PB_SVrefine2Falcon2Bionano_2846:HG2_PB_SVrefine2Falcon1plusDovetail_9506:HG2_Ill_SVrefine2DISCOVARplusDovetail_10259:HG2_10X_SVrefine210Xhap12_4167:HG4_Ill_MetaSV_4130:HG3_Ill_MetaSV_4142:HG2_Ill_MetaSV_3957:HG4_PB_pbsv_5799:HG2_PB_pbsv_5763:HG3_PB_pbsv_5598:HG4_Ill_Spiral_473:HG3_Ill_Spiral_6249;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4167:HG2_Ill_SVrefine2DISCOVARplusDovetail_10259:HG2_PB_SVrefine2Falcon1plusDovetail_9506:HG2_PB_SVrefine2Falcon2Bionano_2846:HG2_PB_SVrefine2PB10Xhap12_4162:HG2_PB_SVrefine2PBcRplusDovetail_8861:HG2_PB_assemblyticsfalcon_21290:HG3_PB_SVrefine2Falcon1Dovetail_3572:HG3_PB_SVrefine2PBcRDovetail_2653:HG3_PB_assemblyticsfalcon_21224:HG4_Ill_SVrefine2DISCOVARDovetail_4230:HG4_PB_SVrefine2PBcRDovetail_2891;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.048951;ClusterMaxEditDist=0.185755;PBcalls=16;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=838;DistBack=0;DistForward=46872;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:42089636-42089634;PctSeqSimilarity=0.9994;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:84:1/1:0:25:0:19:./.:0:0:0:0:1/1:0:24:./.:9:79:.:.:.
chr5	43044180	HG3_Ill_250bpfermikitraw_7694	A	AAAATATATATTATATATGAAATATATATTATATATGAAATATATATTTTATATG	20	PASS	ClusterIDs=HG2_PB_pbsv_5767:HG4_PB_pbsv_5804:HG2_PB_PB10Xdip_24065:HG2_PB_HySA_10718:HG4_Ill_svaba_7474:HG3_Ill_svaba_7442:HG3_Ill_manta_1344:HG3_Ill_Spiral_6254:HG3_Ill_Krunchall_7967:HG3_Ill_GATKHC_9508:HG3_Ill_GATKHCSBGrefine_3861:HG3_Ill_250bpfermikitraw_7694:HG3_Ill_150bpfermikitraw_7516:HG2_Ill_svaba_7357:HG2_Ill_250bpfermikitraw_7993:HG4_Ill_GATKHC_9655:HG4_Ill_GATKHCSBGrefine_4079:HG2_Ill_Krunchall_8156:HG2_Ill_GATKHC_9525:HG2_Ill_GATKHCSBGrefine_4001:HG2_Ill_150bpfermikitraw_7474:HG3_PB_HySA_8847;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7993:HG2_Ill_svaba_7357:HG3_Ill_150bpfermikitraw_7516:HG3_Ill_250bpfermikitraw_7694:HG3_Ill_GATKHCSBGrefine_3861:HG3_Ill_GATKHC_9508:HG3_Ill_Krunchall_7967:HG3_Ill_Spiral_6254:HG3_Ill_manta_1344:HG3_Ill_svaba_7442:HG4_Ill_svaba_7474;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0925926;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.162162;PBcalls=5;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=1;DistForward=45;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=17;REFWIDENED=5:43044179-43044198;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4368.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:16:59:1/1:7:23:8:30:./.:0:0:0:0:0/1:5:29:./.:.:.:.:.:.
chr5	44514220	HG4_Ill_GATKHC_9661	G	GCAGGATGTTCCTTAGTTTGATGCTTCTTACTGGAGAATACTTCTAACAGCAGCACGTTTCTAACATTTTTA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3566:HG4_PB_pbsv_5811:HG4_Ill_svaba_7479:HG2_PB_pbsv_5774:HG4_Ill_manta_1425:HG4_Ill_SVrefine2DISCOVARDovetail_4239:HG4_Ill_Krunchall_8445:HG4_Ill_GATKHC_9661:HG4_Ill_GATKHCSBGrefine_4083:HG4_Ill_250bpfermikitraw_8051:HG4_Ill_150bpfermikitraw_7721:HG2_PB_assemblyticsfalcon_21304:HG2_PB_SVrefine2Falcon2Bionano_2854:HG2_PB_SVrefine2Falcon1plusDovetail_9513:HG2_Ill_svaba_7362:HG2_Ill_manta_1645:HG2_Ill_SVrefine2DISCOVARplusDovetail_10273:HG2_Ill_Krunchall_8166:HG2_Ill_GATKHC_9532:HG2_Ill_GATKHCSBGrefine_4005:HG2_Ill_250bpfermikitraw_8001:HG2_Ill_150bpfermikitraw_7481:HG2_10X_SVrefine210Xhap12_4178;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4178:HG2_Ill_150bpfermikitraw_7481:HG2_Ill_250bpfermikitraw_8001:HG2_Ill_GATKHCSBGrefine_4005:HG2_Ill_GATKHC_9532:HG2_Ill_Krunchall_8166:HG2_Ill_SVrefine2DISCOVARplusDovetail_10273:HG2_Ill_manta_1645:HG2_Ill_svaba_7362:HG2_PB_SVrefine2Falcon1plusDovetail_9513:HG2_PB_SVrefine2Falcon2Bionano_2854:HG2_PB_assemblyticsfalcon_21304:HG4_Ill_150bpfermikitraw_7721:HG4_Ill_250bpfermikitraw_8051:HG4_Ill_GATKHCSBGrefine_4083:HG4_Ill_GATKHC_9661:HG4_Ill_Krunchall_8445:HG4_Ill_SVrefine2DISCOVARDovetail_4239:HG4_Ill_manta_1425:HG4_Ill_svaba_7479;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0547945;ClusterMaxEditDist=0.22973;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=71;DistBack=74636;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=5:44514221-44514230;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:31:0|1:27:3:4:28:./.:0:0:0:0:0/1:35:23:./.:.:.:.:.:.
chr5	45376353	HG2_Ill_manta_1646	A	AGAATATAGAATATATATTCTATATAGAATATAGAATATATATTCTATATTCCATATAGAATATAGAATATATATTCTATATAGAATATATATTCTATATAATATATG	20	PASS	ClusterIDs=HG3_PB_HySA_8858:HG3_PB_assemblyticsfalcon_21247:HG3_PB_pbsv_5610:HG4_PB_HySA_8583:HG2_PB_pbsv_5778:HG3_PB_HySA_8859:HG3_PB_SVrefine2Falcon1Dovetail_3583:HG2_PB_PB10Xdip_24078:HG2_PB_SVrefine2PBcRplusDovetail_8869:HG2_PB_SVrefine2PB10Xhap12_4169:HG2_PB_SVrefine2Falcon2Bionano_2856:HG2_Ill_SVrefine2DISCOVARplusDovetail_10275:HG2_PB_assemblyticsfalcon_21311:HG2_PB_SVrefine2Falcon1plusDovetail_9515:HG4_Ill_GATKHC_9673:HG2_PB_PB10Xdip_24077:HG4_PB_pbsv_5817:HG2_PB_HySA_10723:HG4_PB_HySA_8582:HG4_PB_assemblyticsfalcon_20822:HG4_Ill_GATKHCSBGrefine_4086:HG3_Ill_scalpel_5704:HG3_Ill_GATKHC_9519:HG3_Ill_GATKHCSBGrefine_3865:HG2_Ill_manta_1646:HG2_Ill_GATKHC_9540:HG2_Ill_GATKHCSBGrefine_4007:HG2_Ill_250bpfermikitraw_8006:HG2_Ill_150bpfermikitraw_7485;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7485:HG2_Ill_250bpfermikitraw_8006:HG2_Ill_GATKHCSBGrefine_4007:HG2_Ill_GATKHC_9540:HG2_Ill_manta_1646:HG3_Ill_GATKHCSBGrefine_3865:HG3_Ill_GATKHC_9519:HG3_Ill_scalpel_5704:HG4_Ill_GATKHCSBGrefine_4086:HG4_Ill_GATKHC_9673;NumExactMatchSVs=10;ClusterMaxShiftDist=0.111628;ClusterMaxSizeDiff=0.102326;ClusterMaxEditDist=0.297674;PBcalls=18;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=107;DistBack=-73;DistForward=97;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=132;REFWIDENED=5:45376321-45376452;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4370.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:68:1/1:3:19:3:20:./.:0:0:0:0:1/1:1:12:./.:.:.:.:.:.
chr5	45919875	HG2_Ill_SVrefine2DISCOVARplusDovetail_10278	C	CCCAAACAGCTGAATAAATAAAAGGTTTAACTCTGTGAGATGAATGCAAACATTACAAAGCAGCTTCTCAGAAAGTTTCTTTCTAGTTTATATCTGAAGATATCTTACTTTTCACCATAGGCCTAAATGCAATCCCAAATATCCCTTCACAGTTTCTACAAAAACAGGGATT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10278:HG2_10X_SVrefine210Xhap12_4181:HG2_PB_pbsv_5779:HG2_PB_PB10Xdip_24079:HG4_PB_pbsv_5819:HG2_PB_HySA_10724:HG2_PB_SVrefine2PBcRplusDovetail_8870:HG2_PB_SVrefine2PB10Xhap12_4170:HG2_PB_SVrefine2Falcon1plusDovetail_9516;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10278:HG2_PB_SVrefine2PBcRplusDovetail_8870:HG2_PB_SVrefine2PB10Xhap12_4170:HG2_PB_SVrefine2Falcon1plusDovetail_9516;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0896359;ClusterMaxSizeDiff=0.0840336;ClusterMaxEditDist=0.271003;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=171;DistBack=21267;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=401;REFWIDENED=5:45919876-45920276;PctSeqSimilarity=0.9714;PctSizeSimilarity=0.9942;PctRecOverlap=0.3757;SizeDiff=-1;StartDistance=-107;EndDistance=-107;GTMatch=0;TruScore=78;MatchId=4371.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:31:./.:6:13:13:6:./.:0:0:0:0:0/0:19:0:./.:.:.:.:.:.
chr5	50785670	HG2_Ill_MetaSV_3972	T	TAATAGTTAGGAATAGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGCAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3589:HG3_PB_assemblyticsfalcon_21260:HG2_PB_pbsv_5785:HG2_PB_HySA_10743:HG2_Ill_breakscan11_3567:HG3_Ill_GATKHCSBGrefine_3869:HG2_PB_SVrefine2Falcon2Bionano_2861:HG2_Ill_MetaSV_3972:HG2_PB_SVrefine2Falcon1plusDovetail_9521;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_MetaSV_3972:HG2_PB_SVrefine2Falcon2Bionano_2861:HG3_Ill_GATKHCSBGrefine_3869;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0335878;ClusterMaxSizeDiff=0.021374;ClusterMaxEditDist=0.121581;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=325;DistBack=73766;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:50785671-50785686;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4373.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:39:0|1:29:0:0:28:./.:0:0:0:0:0/1:31:12:0/1:7:50:.:.:.
chr5	51221435	HG2_PB_SVrefine2Falcon2Bionano_2862	TATCAGGCAC	GGAGTATGTGCCTATAACAGTAGCTGAGTCTTGGGCAATCCCAGCAGCCATACTTCAACCACTCACACAGTGCTGAGTGTTCAAACTGTGTTCACATAAGGCAAATGCCAACCTGTAACCAATCCAGCTGTTTCGCTGTTTCTGTACTTCACTTCCAATTTCTATATGTCACTTTACTCTTTTTAACTATAAATTTGGTCTGACCATGAGGCACCCTTGGAGTCTCTCTGAATCTGCTGTGATTCTGGGGGCTGCCTGATTTGCAAATCATTCATTGCTCAATTAAACTCCTTTAAATTTAATTGGGCTGAAGTTTTTCTTTTAACAGATGGTGTCAGAAGTGGGATCTGAAGTACAGCTTCTAATGACCCCCAGGAGCTCTGAGTGAACAAGCAAGGTAACTGCTGGATTCACTTGTGTCTTTTGATCTCTCAGAGTGGCTGGGGGTCATGGTAACTTTTTTCTCAGATTTCAGAGCTCCACGGATTTGTGTTTTGAGCCCTCCAAGATTCTTTTAGAAAATTTCTGTTCCAAACTGTGTTTGGAAGTCACAAAAGAAAATAGACCAACTGAGTCCAGGATTAGATTTGATCCAGCAATTAACTGGCTTGGATCCAGTTAGAGGTCTCTTACATCTGACTGGGTCAGAAAGAAACTGTTAGTAAGTGGTAATATTGCAGGAGTTGTAAAATTTGGCTTTTGAAAATTCACAGGGATTCTTATGTTCTACCTCTTTGTTGCATTTTCCTTGTGTGCTTAAGTAGGAAAAAAAATCCTTGGCTAAGTTAATCAAGGGAAACTGAAAGTAAAACTGATATTTTAAGTAAAAATGAGATCCTTAATTTCTGGAAAACTGCCTTCCTTTCAGCTTATACATTAGGCCCAGAGGTCGTAAAGTCTTACAGAAATCGCAAAATGTTACTAAAGATGATTTATAGTGGAACATTCCAAATGAACAACAACACATTAAAGTGCACTTAACAAAAAATTAGGGCTCCCAAATTAGTCTCATCTAGGGATGCCAGCTGATATGCAGAAGGTTCTAAAAAGATGCCAATATTTTTATTTAAAACACATACTTTGCTCTGGCTGGAATGGAAAATATTAGAATTTAGGTACTCCCATGCAGCTGGTGGGGTGGCAACTTGCAAAACTGAGACGATTTTGCCTGTGGTTCCATGATTTTCCTTTGTGTTGTAGCTTGGCCCCCAGGGCAATGGTGTGGGAAGCCAGGTCCCTAGGGTTGCTCAGGGAAAGAGAACCCAGAAGCCTGCCATGCCAGCAAAAAGGTAAGAATTTCTTACCAGTCAGACTTCTGGCCAGTCTCTCTCTGTGCAAACCAGTTGAATGAATGATAAAAATCACTGTTAATATCCTCTGTAAAGTTTTGATTCATGGGAAAAAAGATTTGTTAGGCTAATCTTAAGCTGTAGTGAATCTGGTATGCTTTGAGTGTCTTTCTGTATTGTTCTGTCATAAACAGGGGTACCTTAGGATAGAACATGGGCTTAGAACCCCATAAGCCCACTGTTCAAGATGGCCCAGCAAACTGGTCTGTTATGTCCTTGGGAGCTTGACCTTGTAACCACGTGGCAGCACTTTCTTTTGGTCTCCATCATCACAATTGCAGCCCAGGTTCAGAGTTCAATTCCCTGCTTAAGGAATGAGTACTTTCTTGTTTGATATCTGCATGACTTTTGTTGATTTTCTTCCACTTCATGAACCATCTTGAATTTTCCTTTCTCTGAGCATTTGTGAGGTTACCTTTGGTAATGTTCAAAAGCCAGTAATATTGGCTGTTTGGTCTGGCTAAATTCAGGTAAAAGATATTTAAAAGGACTTCTAAAGTGCTATGGTTAAAAGTCAGCTTAATTAAAAGTGGATATCCAAGCTATAGGTATATTTAAAACGCCTTTGTGTTTACTTCTTGGATCTTGTTTTTCTGGAAAAAGGGTTTTGCTTCTCAGTCAACTGTATTATTTCTCTCCATTTTATCTTGCCACTCTTAATGCACACAAGAGGCCCTAACCTGGTATTCCTCGGGGAAAACAGAGGAGGCACCACAGACCCTATTTGGGGAAAAACCTTTGTTTTCCTCATGAAACCCCAGGAACTGAAAGTGAATAGACCCCTCTCAAAGTCTAAGGTTCTGTTCTGTTTTGCATTGTGTTATCTGACATTTTTGACTTTGGGGAGTATCAGAGATTGATCTGCATTATGAGAGGGCTTTAGTGTGCAGTAACAAGGTAGGAAATATACTTTTAGAGATGGGCCAATTCCAAAATGAGCTGATTGGCTTTGGGTTGCCATGCAATAAAATGCCCAGTAAAAGCGTTGCACTGTCTTCTCCCATAGCATCTCTTTCTTTTGGGGGATCCCAGATGTATCTAAAAATGGGACCCTTAATTTTGGAGATCTGTTTTTGTCTT	20	PASS	ClusterIDs=HG2_PB_HySA_10754:HG3_PB_pbsv_5619:HG3_PB_HySA_8879:HG4_PB_pbsv_5831:HG2_PB_pbsv_5789:HG4_PB_HySA_8597:HG2_10X_SVrefine210Xhap12_4191:HG4_PB_SVrefine2PBcRDovetail_2906:HG3_PB_SVrefine2PBcRDovetail_2666:HG3_Ill_SVrefine2DISCOVARDovetail_4305:HG2_PB_SVrefine2PBcRplusDovetail_8880:HG2_PB_SVrefine2PB10Xhap12_4180:HG2_PB_SVrefine2Falcon2Bionano_2862:HG2_PB_PB10Xdip_24092:HG2_PB_PB10Xdip_24091:HG2_Ill_SVrefine2DISCOVARplusDovetail_10285:HG2_PB_SVrefine2Falcon1plusDovetail_9523:HG3_PB_SVrefine2Falcon1Dovetail_3591:HG4_PB_SVrefine2Falcon1Dovetail_3504:HG4_PB_HySA_8596;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10285:HG2_PB_PB10Xdip_24091:HG2_PB_PB10Xdip_24092:HG2_PB_SVrefine2Falcon2Bionano_2862:HG2_PB_SVrefine2PB10Xhap12_4180:HG2_PB_SVrefine2PBcRplusDovetail_8880:HG3_Ill_SVrefine2DISCOVARDovetail_4305:HG3_PB_SVrefine2PBcRDovetail_2666:HG4_PB_SVrefine2PBcRDovetail_2906;NumExactMatchSVs=9;ClusterMaxShiftDist=0.118572;ClusterMaxSizeDiff=0.117497;ClusterMaxEditDist=0.190799;PBcalls=17;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=2419;DistBack=3004;DistForward=58977;DistMin=3004;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:51221445-51221434;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9988;PctRecOverlap=0.9967;SizeDiff=-3;StartDistance=1;EndDistance=10;GTMatch=0;TruScore=99;MatchId=4374.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:124:1/1:0:9:0:24:./.:0:0:0:0:1/1:0:48:1/1:14:386:.:2322:.
chr5	51401920	HG2_Ill_SVrefine2DISCOVARplusDovetail_10287	A	AATTATAAGACTCTTCACTTCTCAAAAGTTCTCTGAAATGAATTTGTAAAATCAATACATCTATTTGTGTTTGAATTCTTCATCGTACATCATGATTCATGACCGTATTTTTCATATAGATTCAAGAAACTCCTCTCAAAATGCTTTAGATCTATGTGCAGATCAAATAAGCCTAACCTCAACATTGTCAGTATTCTTCTATACAGAGAACAGAGTTAATGTACTTTACAGAAAACACATAGCACTAAAGCTGCAGAGAAGAAGGAAACAGGCAGTATAAAGTAGAAAATGCAAATAAAGTTATGTGCTAAGGATGTTGCACTGAGTACAAAGCAATTTGGTAAAGGAGTGGGTTCAAACAAGTAATAAAGAGAGCTACACACAACAGATAAAGATTTTAAATTTTGGTTTTGAGAAAAGAAACTTGGCTGTGAAAAGACTGTAGAGACAGGATTCATCCTGAAAGACAGAAACTCTGTGTTAGCAGGTATAATTACCATATATCCAAAATAATCAAAATTATTCACTGATTTATCTCTCCATGTGGAAATATCACATCCAGAAACAGAACAAAATAGAAAATTAGGAAATTTAAAATAAATTTGCATTCTGTTTTTGCCATATTGGAGGTGAAGTAGAGATCAGACTATGAAGTTTAAGGTATCTTGTAGTAGAAAAAATAGGATTAAACAGAGAGGACTCATAAATGGTGGTAAAACTTATTTGGGGGTAATCTGAGAATAAGAGTGATAATACTGGACAACACATTAAAATGAGTAGGAAGGCTCTAATGGAAAACATCTGGGGACATCTGGTAAATAAGTGAAGTAGTACAGGTTTCCTATGTTGCTTGACATGTTAAATGCATAGACATACTTGGCAGAATATAATGATGAGACTGAACATATTCAATAGAAAGAAAGGGAATACTCCAGAAACCAGAAAAAAAAGAAAGAAATTGAATTTGATGTAAGTATTGAAATTAACGCTAAACAATTCATAATACATTGTGCTTGAGAGCTCTGGGAACTGGAATTTTAAAGCCCAAGTAAAAATTGAGATGAGGGCTAAACCTTTGAGAGATTGGGGACTTGGAACTTTGCTACATGCATAAATCCAAGAGCTAAAAGATTTGTCGAACCAAAAAAACAAAAACAAAAACAAACAAGCAAAGCAACATTGACTAGAAAACCTCGATTTCTCAGTTTAGAGACAATCTAGAAAGTCTACCTGGACCAGGAGATGAAAATCAGAAACCTAACTGTGTGTCATCACTGGTATAACCTTAAAATTCATACTAGTTATGAAGAAAAAAAAAAACCCAAATCAGTAGCTCATTATAATACTGTTCCTGAACCAGAAACATCTGTGGAGCCTCAGAAGCAGCAAAGATACTAATCTCCCAATAGGAAAATGGTGAAAAAAAATATATATATATATATACATATATATATATAAACCAAGTGTAAAGTTTAAAGAAAGTCAAGAAAAATCTGAATTAAAATTAATAGTGGAGAATGGTGTTAAAGATGAAGGATTCATTAGAGTGGTAGGATTCAATTTTCCATGGAAAAAGAGCCCTCAAAGGAAACAGCCTTTGATGAAAATGAACTCACAGTAAACATTTTTTAAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATAAACAATGAAGCAGTGAAAGAATAGCAGCAACAAAACCAAAATGTATTTATAAAGAACTCAAGATAGTGAAATTATTTGAAAAAAATTTGCAAAAAATCATGGAAAATATTTAGAGACCAGAAAAAGTATGATATACTACAGTCAGCCCTCAGTAACAGCAGGTTCTGCATATAGGGATTCAACCAACCATGGCTCAAAAATATTTGAAAATAAAACAAAAAAAAATCAATACAATAAGAAATAGGCTGGGTGCTGTGGCCCATGCCTATAATCCCAGCACATTGGTAGGCTGGGATAGGAGAGTCACTTGGGCTCAGGTGTTCAAGACCAGCCTGGGGAGACCCACTCTCTACAAAAATAAATTTAAAAACTCAGCCAGGCGTGATGGTGCACACCTATGGTCCCAGCTGCTTGAGAGGCTGAGGTGGGAGGATCACTTGGGCCTAGAAGGTCACAGCTGCAGTGAGCTTTGTTTGTACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACCCTCTCTCAAAAATAAATATAATAAATATAATACGAATTTTAAAATATAGTCTAACAATTATTTATGTAGCATTTATACTGCATTAGGTATTATAAATAATCTAGAGATGATTTAAAGTATGCAAGAGGATGTGCATAGTTTATGTGAAATTATTATGCTATTTTCCATAAGTGACCTGAGTATTCGCAGATTTTGTTGTCTGTGGAGGTTCTGGGACCAATCCCCCTTGCAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3506:HG2_PB_pbsv_5792:HG3_PB_pbsv_5621:HG4_PB_pbsv_5835:HG2_PB_PB10Xdip_24100:HG2_PB_PB10Xdip_24099:HG2_Ill_breakscan11_3568:HG2_PB_SVrefine2Falcon1plusDovetail_9525:HG3_PB_SVrefine2Falcon1Dovetail_3593:HG2_PB_SVrefine2PB10Xhap12_4182:HG3_Ill_SVrefine2DISCOVARDovetail_4309:HG2_Ill_SVrefine2DISCOVARplusDovetail_10287:HG2_PB_SVrefine2PBcRplusDovetail_8882:HG2_PB_SVrefine2Falcon2Bionano_2864:HG2_10X_SVrefine210Xhap12_4192;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10287:HG3_Ill_SVrefine2DISCOVARDovetail_4309;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0451886;ClusterMaxSizeDiff=0.0447852;ClusterMaxEditDist=0.180127;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=2430;DistBack=47923;DistForward=2237;DistMin=2237;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=5:51401921-51401930;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9984;PctRecOverlap=0.9984;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:137:1/1:0:41:0:40:./.:0:0:0:0:1/1:0:53:1/1:10:249:.:2403:.
chr5	51418510	HG3_PB_SVrefine2Falcon1Dovetail_3594	A	AGAGCATGTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3594:HG2_PB_pbsv_5794:HG3_PB_pbsv_5623:HG4_PB_assemblyticsfalcon_20837:HG3_PB_assemblyticsfalcon_21267:HG2_PB_HySA_10760:HG2_PB_SVrefine2Falcon1plusDovetail_9527:HG4_PB_SVrefine2Falcon1Dovetail_3507;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_3594:HG4_PB_SVrefine2Falcon1Dovetail_3507;NumExactMatchSVs=2;ClusterMaxShiftDist=0.139394;ClusterMaxSizeDiff=0.139394;ClusterMaxEditDist=0.175758;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=330;DistBack=9950;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=5:51418511-51418527;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:34:0|1:21:6:4:20:./.:0:0:0:0:0/1:21:10:./.:4:45:.:.:.
chr5	51826921	HG2_PB_SVrefine2PB10Xhap12_4183	T	TGCTGCCAATAAAGACATACCCAAGACTAGGTAATTTATAAAGAAAAAGTGGTGTAATGGACTCAGTTTCACATGCCCGGGGAGTGCTCATAATCATGGCAGAAGGTGAAAGGCACATCTCACATGGTGGCAGGCAAGCAGAGAATAAGAGCCAAGTGAAAGGGGTTTCCCATTGTAAAACCATGAGATCTCATGAGACCTCATGAGACTTATTCACTACCACGAGAACAGTGTGGGGAAAACCACCCCCATGATTCAATTATCTTTCACCCAGTCCCTCCCACAACACAAGGGAATTATGGAAGCTACAATTCAAGAAGAGATTTAGGTGGTGACACAGCCAAACCGTATCATTCCACCTCAGGCTCATCCCCAATCTCAAGTCCTCACATTTCCAAACCAATCATTCCTTCCCAACAGTCCCCCAAAGTCTTAACTCATTTCAGCATTAACCCAAAGCCCACAGTCCAAAGTCATATCTGAGACATGGCAAGTCCCTTCTGCCTATGAACCTGTAAAATCAAAAGCAAGTTAGTTACTTCCTAGATACAGCAGAAGTACATTGAATAAATACATGGCTCCAAATGGGAGAAATGGGCCAAAACAAAGAAGCTAAAGGCCTCATGCAAGTCTGAAATCCAGCAGGGCAGTCAAATCTTAAAGCTCCAAAATAATCTCCTTTTACTCTATGTCTCATATACAGGTCACACTGATATGTTGTGGGAAATCAGGGACCCCAAATGGAGGGATCGGCTGGAGCTGCAGCAGAGGAACATAAATTGTGAAGATTTAATGGACTTTTATCAGTTCCCAAATAATACTTTTATAATTTCTTATGCTTCTCTTTACTTTAATCCCTTAATCCTGTTATCTTCATAAGCTGAAGATATATGCCACCTCAGGACCACTATGATAATTGTGTTAACTGTACAAATTGATTGCAAAACATGTGTGTTTGAACAATATGAAATCAGTGCACCTTGAAAAAGAACAGAATAACAGCGATTTTTAGGGAACAAGGGAAGACAACCATAAGGTCTGACTCCCTGAAGGGTTGGGCAAAAAGAGCCATATTTTTCTTCTTGCAGAGAGCCTGTAAAAGGATGTGCAAGTAGGAGAGATATCACTACATTCTTTTCCTAGCAAGGAATATTAATATTAATACCCTGGGGAAGGAATGCATCCCTGGGGGGAGGTCTATAAATGGCGTCTCTGGGAATGTCTGTTTTACGCAGTTGAGATAAGGACTGAGATACACCCTGGTCTCCTGCAGTACCCTCAGGCTTACTAGGGTGGAGAAAAACTCCACCCTGGTAAATTTGTGGTCAGACCGGTTCTCTGCTCTCGAACCCTGTTTTCTATTGTTTAAGATGTTTATCAAGACAATATGTGCACTGCTGAACATAGACCCTTATCAGTGGTTCTGCTTTTTCCCTTTGTCCTGTTCCCTCAGAAGCATGTGATCTTTGTTAAATCCTTATTAGCAGTTCTGCTTTTTGCCCTTTGAAGCATGTGATCTTTGTACCTACTCCCTGTTCTTACAACCCCTCCCCTTTTGAAACCCTTAATGAAAACTTACTGGTCTGAGACTCAGGCGGGCATCATGGTCCCACCGATATGTGATGTCACCCCTGGCTGCCCAGCTGTAAAATTCCTCTCTTTGTACTGTCTCTCTTTATTTCTCAGCCAGCCAACACTTATGGAAAATAGAAAGAACCTACATTGAAATACTGGGGGCAGTTTCCCCCAATATCTGGTGCACCAACATGGTTTTCTTTTTCCTAAGTGCATGTGGGAACCCGATTCCCCTTGGTAGGTGCATAGAAATGTTCTTCAGTCCGGTTCACAAAAACGCTTGTTCGGCTCCCTGATGATTGGTGAGTTGTCTGTGTCTTGTCCAGTGTAACTATGGGTCATGTAGAGTCTAAATGTTGTGCTTATATCTGCTATATTAAACTGCTGTTAAACAGGGGGGAGTTCAGGTACCCATGAAAAATATGATCACCCTATTCAGGGCGATGGAAGAACACTGTCCTTTGTTTCCTGAAAAGGGAACGTGAGATGTGGAACTATGGGATTGTGTTGATGCAAAATTCCAGGAACTGTTCCCAACAAGAAATTATGTTCCCATCACTGTTTGGGGTGATTGGGCCTTGGTACGTGCTGTCCTAATGACATACCAATCCTGTGGCCCCCTGAAGTTACCACAGTTTTCTGAATCTGGTGACCCTCTACCTCTTCCTCAGCTTTCCTATCCTGCTTGGCCTTTGTTATCTGCTCAGCCTCCCCCTTCGCCTACTCTTCCCCACCTGATGATACTGAGGATTCAATATCTAACTCCGGTGACTTTGGCTTAACATCACCCCTGATGATCTTATTTCTTTTCATGAAGAGCCACTACTTGCAACTCCCACGGCCCCGACTCGGACAGCCCAGGACCATATCTATGCTAACTCTTCCCTCTTCAAACCTTTGCAGCCTTTGCCTCTGGAGCCATCTAATGGCTCTGGGACCAAACTACAATTTACCTGTAATTCTGCAGGCCCTCCCCCAATGCCCCTTTCTCATGCTCTCATACCGGTCCTACCCCCTCAACCTCAGTTTCCCTTATCTAAACATACTTTTCCTGTCACTTCTATGCTGACTCCGTCTCATGTGCCTGTTCTTGAAACTTCCATGCAATGCTCATTATGCCAGAACAAAGAAACAAGTGGATTAGAGGTGTGGGCTTATCCGGCCAACACTTATGGAAAATAGAAAGAACCTACATTGAAATATTGGGGCAGGTTCCCCCAATACTGATACAAGAGGTGGGTTCCCATGATCTTGGGCAGCTTTGCTCTTGTGGATTTGCAGGGTATAGCCTCCCTCCCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_24101:HG3_PB_pbsv_5625:HG2_PB_pbsv_5795:HG4_PB_pbsv_5836:HG2_Ill_breakscan11_3569:HG4_PB_HySA_8603:HG2_PB_SVrefine2Falcon1plusDovetail_9528:HG4_Ill_SVrefine2DISCOVARDovetail_4255:HG2_Ill_SVrefine2DISCOVARplusDovetail_10288:HG2_PB_SVrefine2PBcRplusDovetail_8883:HG2_PB_SVrefine2PB10Xhap12_4183:HG2_PB_SVrefine2Falcon2Bionano_2865:HG2_10X_SVrefine210Xhap12_4193:HG3_PB_SVrefine2PBcRDovetail_2668:HG4_PB_SVrefine2Falcon1Dovetail_3509:HG3_PB_SVrefine2Falcon1Dovetail_3596:HG2_PB_PB10Xdip_24102;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4183:HG2_PB_SVrefine2PBcRplusDovetail_8883;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0676756;ClusterMaxSizeDiff=0.0669954;ClusterMaxEditDist=0.211306;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=2873;DistBack=30033;DistForward=9055;DistMin=9055;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=5:51826922-51826926;PctSeqSimilarity=0.9995;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4377.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:110:1/1:3:31:0:29:./.:0:0:0:0:1/1:0:38:1/1:4:410:.:2774:.
chr5	52432966	HG3_Ill_Krunchall_8005	C	CATATATGTGTGTATATATACACACACATATATATGTGTGTATATATACACACACAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3570:HG3_PB_HySA_8900:HG2_PB_HySA_10772:HG3_Ill_svaba_7477:HG3_Ill_manta_1349:HG3_Ill_Spiral_6284:HG3_Ill_Krunchall_8005:HG3_Ill_GATKHC_9553:HG3_Ill_GATKHCSBGrefine_3878:HG3_Ill_FB_5146:HG3_Ill_250bpfermikitraw_7734:HG3_Ill_150bpfermikitraw_7551:HG2_Ill_svaba_7395:HG2_Ill_SpiralSDKrefine_13544:HG2_Ill_SVrefine2DISCOVARplusDovetail_10292:HG2_Ill_Krunchall_8201:HG2_Ill_GATKHC_9577:HG2_Ill_GATKHCSBGrefine_4025:HG2_Ill_FB_5182:HG2_Ill_250bpfermikitraw_8037:HG2_Ill_150bpfermikitraw_7518:HG2_10X_SVrefine210Xhap12_4197:HG2_PB_SVrefine2PBcRplusDovetail_8885;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4197:HG2_Ill_150bpfermikitraw_7518:HG2_Ill_250bpfermikitraw_8037:HG2_Ill_FB_5182:HG2_Ill_GATKHCSBGrefine_4025:HG2_Ill_GATKHC_9577:HG2_Ill_Krunchall_8201:HG2_Ill_SVrefine2DISCOVARplusDovetail_10292:HG2_Ill_SpiralSDKrefine_13544:HG2_Ill_svaba_7395:HG3_Ill_150bpfermikitraw_7551:HG3_Ill_250bpfermikitraw_7734:HG3_Ill_FB_5146:HG3_Ill_GATKHCSBGrefine_3878:HG3_Ill_GATKHC_9553:HG3_Ill_Krunchall_8005:HG3_Ill_Spiral_6284:HG3_Ill_manta_1349:HG3_Ill_svaba_7477;NumExactMatchSVs=19;ClusterMaxShiftDist=0.188034;ClusterMaxSizeDiff=0.188034;ClusterMaxEditDist=0.188034;PBcalls=3;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=56;DistBack=21684;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=5:52432967-52433002;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4378.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:0|1:24:1:5:30:./.:0:0:0:0:0/1:21:21:./.:.:.:.:.:.
chr5	53383591	HG3_Ill_150bpfermikitraw_7559	A	AGACAGAGTCTTGCTTTCTTGCCCAGGCTGGAGTGCAGTGGCACGATCCTGAGTCACTGGAAACTCC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7526:HG4_PB_pbsv_5844:HG3_PB_pbsv_5633:HG2_PB_PB10Xdip_24109:HG2_Ill_breakscan11_3571:HG4_PB_HySA_8611:HG2_PB_pbsv_5804:HG3_PB_HySA_8908:HG4_PB_assemblyticsfalcon_20851:HG4_Ill_svaba_7522:HG4_Ill_manta_1434:HG4_Ill_Krunchall_8505:HG4_Ill_GATKHC_9722:HG4_Ill_GATKHCSBGrefine_4106:HG4_Ill_250bpfermikitraw_8099:HG4_Ill_150bpfermikitraw_7767:HG3_PB_assemblyticsfalcon_21282:HG3_Ill_svaba_7483:HG3_Ill_manta_1351:HG3_Ill_Spiral_6292:HG3_Ill_Krunchall_8012:HG3_Ill_GATKHC_9561:HG3_Ill_GATKHCSBGrefine_3881:HG3_Ill_250bpfermikitraw_7741:HG3_Ill_150bpfermikitraw_7559:HG2_Ill_svaba_7400:HG2_Ill_SpiralSDKrefine_13549:HG2_Ill_Krunchall_8209:HG2_Ill_GATKHC_9587:HG2_Ill_GATKHCSBGrefine_4027:HG2_Ill_250bpfermikitraw_8044;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7526:HG4_PB_assemblyticsfalcon_20851:HG4_Ill_svaba_7522:HG4_Ill_manta_1434:HG4_Ill_Krunchall_8505:HG4_Ill_GATKHC_9722:HG4_Ill_GATKHCSBGrefine_4106:HG4_Ill_250bpfermikitraw_8099:HG4_Ill_150bpfermikitraw_7767:HG3_PB_assemblyticsfalcon_21282:HG3_Ill_svaba_7483:HG3_Ill_manta_1351:HG3_Ill_Spiral_6292:HG3_Ill_Krunchall_8012:HG3_Ill_GATKHC_9561:HG3_Ill_GATKHCSBGrefine_3881:HG3_Ill_250bpfermikitraw_7741:HG3_Ill_150bpfermikitraw_7559:HG2_Ill_svaba_7400:HG2_Ill_SpiralSDKrefine_13549:HG2_Ill_Krunchall_8209:HG2_Ill_GATKHC_9587:HG2_Ill_GATKHCSBGrefine_4027:HG2_Ill_250bpfermikitraw_8044;NumExactMatchSVs=24;ClusterMaxShiftDist=0.102941;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.242857;PBcalls=8;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=5:53383590-53383593;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4379.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:./.:2:2:0:0:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr5	54729288	HG3_PB_HySA_8923	T	TTTCAGTAAAGTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCGGGACTGAGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACGCGCACGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCGCCTCGCCTCCAAAGTGCTGGATTACAGGCCTGAGCCACCGCGCCCGGCCAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3572:HG4_PB_pbsv_5850:HG3_PB_HySA_8923:HG3_PB_pbsv_5641:HG2_PB_HySA_10787:HG4_PB_SVrefine2Falcon1Dovetail_3517:HG3_PB_SVrefine2Falcon1Dovetail_3605:HG2_PB_SVrefine2Falcon1plusDovetail_9537:HG4_PB_HySA_8627;NumClusterSVs=9;ExactMatchIDs=HG3_PB_HySA_8923;NumExactMatchSVs=1;ClusterMaxShiftDist=0.141274;ClusterMaxSizeDiff=0.138504;ClusterMaxEditDist=0.217687;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=335;DistBack=172932;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:54729289-54729289;PctSeqSimilarity=0.9881;PctSizeSimilarity=0.9911;PctRecOverlap=0.9882;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4380.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:27:0|1:32:0:0:23:./.:0:0:0:0:0/1:14:6:0/1:7:27:.:.:.
chr5	54865790	HG2_Ill_MetaSV_3978	T	TATTAACTTGCAGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATATAAAAAAAAAATTAGCTGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGACTGGCGTGAACCCCGGAGGCGGAGCTTGCAGCGAGCCAAGATTGCGCCACTGCATTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_2676:HG3_PB_pbsv_5643:HG2_PB_pbsv_5813:HG2_Ill_breakscan11_3573:HG3_Ill_MetaSV_4156:HG3_Ill_GATKHCSBGrefine_3890:HG2_Ill_MetaSV_3978:HG2_Ill_GATKHCSBGrefine_4041:HG3_PB_HySA_8924:HG2_PB_HySA_10788:HG4_PB_assemblyticsfalcon_20866:HG4_PB_SVrefine2Falcon1Dovetail_3518:HG2_PB_SVrefine2PBcRplusDovetail_8891:HG2_PB_SVrefine2Falcon2Bionano_2872:HG3_PB_SVrefine2Falcon1Dovetail_3606;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4041:HG2_Ill_MetaSV_3978:HG3_Ill_GATKHCSBGrefine_3890:HG3_Ill_MetaSV_4156;NumExactMatchSVs=4;ClusterMaxShiftDist=0.122835;ClusterMaxSizeDiff=0.122835;ClusterMaxEditDist=0.211024;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=-10;DistForward=25202;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=5:54865784-54855954;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:46:0|1:20:2:0:37:./.:0:0:0:0:0/1:24:8:0/1:8:26:.:.:.
chr5	55447994	HG3_Ill_SVrefine2DISCOVARDovetail_4326	T	TAAAAACTTTTGTTTGTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAACAACAAAAACAAAAACAAAAACAAAAAAATAAATGAATAAAATAAAACAAGTACAAATTTAAACTAGAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_10795:HG2_PB_pbsv_5818:HG2_PB_PB10Xdip_24117:HG3_PB_pbsv_5648:HG2_PB_PB10Xdip_24116:HG4_PB_assemblyticsfalcon_20875:HG3_PB_HySA_8929:HG2_PB_SVrefine2PBcRplusDovetail_8894:HG4_Ill_MetaSV_4147:HG3_PB_SVrefine2PBcRDovetail_2678:HG3_PB_SVrefine2Falcon1Dovetail_3610:HG3_Ill_manta_1355:HG3_Ill_SVrefine2DISCOVARDovetail_4326:HG3_Ill_MetaSV_4158:HG3_Ill_GATKHCSBGrefine_3891:HG2_Ill_SVrefine2DISCOVARplusDovetail_10304:HG2_10X_SVrefine210Xhap12_4207:HG4_Ill_SVrefine2DISCOVARDovetail_4271:HG4_Ill_GATKHCSBGrefine_4118:HG2_PB_SVrefine2PB10Xhap12_4194:HG2_PB_SVrefine2Falcon2Bionano_2874:HG2_PB_SVrefine2Falcon1plusDovetail_9540:HG2_Ill_MetaSV_3980:HG2_Ill_GATKHCSBGrefine_4043:HG4_PB_SVrefine2Falcon1Dovetail_3522:HG4_PB_HySA_8629;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4207:HG2_Ill_SVrefine2DISCOVARplusDovetail_10304:HG3_Ill_GATKHCSBGrefine_3891:HG3_Ill_MetaSV_4158:HG3_Ill_SVrefine2DISCOVARDovetail_4326:HG3_Ill_manta_1355:HG3_PB_SVrefine2Falcon1Dovetail_3610:HG3_PB_SVrefine2PBcRDovetail_2678:HG4_Ill_MetaSV_4147;NumExactMatchSVs=9;ClusterMaxShiftDist=0.157895;ClusterMaxSizeDiff=0.157895;ClusterMaxEditDist=0.252546;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=255;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:55447995-55448010;PctSeqSimilarity=0.9921;PctSizeSimilarity=0.9843;PctRecOverlap=0.9843;SizeDiff=4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:0:18:2:14:./.:0:0:0:0:1/1:0:20:./.:.:.:.:.:.
chr5	55927966	HG2_PB_SVrefine2Falcon2Bionano_2875	T	TAAAAGATACAGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGTCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_8932:HG2_PB_pbsv_5819:HG2_PB_SVrefine2PBcRplusDovetail_8895:HG2_PB_SVrefine2Falcon1plusDovetail_9541:HG2_PB_SVrefine2PB10Xhap12_4195:HG3_Ill_GATKHCSBGrefine_3893:HG2_PB_SVrefine2Falcon2Bionano_2875:HG2_Ill_MetaSV_3981:HG2_Ill_GATKHCSBGrefine_4044:HG3_PB_pbsv_5650:HG2_Ill_breakscan11_3574;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4044:HG2_Ill_MetaSV_3981:HG2_PB_SVrefine2Falcon2Bionano_2875:HG3_Ill_GATKHCSBGrefine_3893;NumExactMatchSVs=4;ClusterMaxShiftDist=0.191126;ClusterMaxSizeDiff=0.191126;ClusterMaxEditDist=0.242321;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=309;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:55927967-55927980;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:43:0|1:33:2:0:33:./.:0:0:0:0:0/1:21:17:0/1:11:47:.:.:.
chr5	56104377	HG3_PB_SVrefine2PBcRDovetail_2679	ATATGGG	GTCTTCCCTCACATAACAGAAACGCAATGGATTCCTGAATAACATGTCACGTCCTGGTTGTCTGAGAGTCCATGTTCTTGTTTCCCTTTGTGTTCCATTTCATGGATCCCTAACTACT	20	PASS	ClusterIDs=HG3_PB_pbsv_5651:HG4_Ill_svaba_7548:HG3_Ill_svaba_7510:HG3_Ill_250bpfermikitraw_7764:HG3_Ill_150bpfermikitraw_7588:HG2_Ill_svaba_7429:HG4_PB_assemblyticsfalcon_20881:HG4_PB_SVrefine2Falcon1Dovetail_3524:HG4_Ill_manta_1439:HG4_Ill_SVrefine2DISCOVARDovetail_4273:HG4_Ill_Cortex_2924:HG3_PB_assemblyticsfalcon_21317:HG3_PB_SVrefine2PBcRDovetail_2679:HG3_PB_SVrefine2Falcon1Dovetail_3612:HG3_Ill_manta_1356:HG3_Ill_Spiral_6311:HG3_Ill_SVrefine2DISCOVARDovetail_4327:HG3_Ill_Cortex_2933:HG2_Ill_manta_1654:HG2_Ill_SpiralSDKrefine_13563:HG2_Ill_SVrefine2DISCOVARplusDovetail_10305:HG2_Ill_Cortex_7058:HG2_10X_SVrefine210Xhap12_4208:HG4_Ill_MetaSV_4148:HG3_Ill_MetaSV_4160:HG2_Ill_MetaSV_3982:HG2_PB_pbsv_5820:HG4_PB_pbsv_5856;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4208:HG2_Ill_Cortex_7058:HG2_Ill_SVrefine2DISCOVARplusDovetail_10305:HG2_Ill_SpiralSDKrefine_13563:HG2_Ill_manta_1654:HG3_Ill_Cortex_2933:HG3_Ill_SVrefine2DISCOVARDovetail_4327:HG3_Ill_Spiral_6311:HG3_Ill_manta_1356:HG3_PB_SVrefine2Falcon1Dovetail_3612:HG3_PB_SVrefine2PBcRDovetail_2679:HG3_PB_assemblyticsfalcon_21317:HG4_Ill_Cortex_2924:HG4_Ill_SVrefine2DISCOVARDovetail_4273:HG4_Ill_manta_1439:HG4_PB_SVrefine2Falcon1Dovetail_3524:HG4_PB_assemblyticsfalcon_20881;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0756303;ClusterMaxSizeDiff=0.0672269;ClusterMaxEditDist=0.188841;PBcalls=8;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=111;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:56104384-56104376;PctSeqSimilarity=0.9791;PctSizeSimilarity=0.9911;PctRecOverlap=0.9487;SizeDiff=-1;StartDistance=1;EndDistance=7;GTMatch=0;TruScore=97;MatchId=4384.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:28:0|1:41:3:1:25:./.:0:0:0:0:0/1:26:18:./.:.:.:.:.:.
chr5	56545666	HG2_PB_PB10Xdip_24123	T	CCCGTCCTTCCCCCTCCCCTCCTTCCCCCTCCCCTCCTTCCCCCTCCCCTCCTTCCCCCTCCCCTCCTTCCCCCTCCTCTCCTTCCCCCTCCCCTCCTTCCCCCTCCCCTCCTTTCCCCTCCCCTCCTTGCACCTCCCCTTCCCCCCACCTCCTTCCGCCTCCCCCTACCCTTCCCCCTCACCTTCCCCTCCTTCCCCCCTCCCCTTCCCCTCCTTCCCCTTCCCCATCCTCCTCCTTCCCCATCCTCTTCCTTCCCCCTCCCCCTTCCCCACCTTCCCCCTCCCCCTTCCCCTCCTTCCCCCTCCCCTCCTTCCCCTTTCCCCCTCCCCTCCTTCCCCTTTCCCCCTTCCCCCTCCCCTCCTTCCCCCTTCCCCCTTCCTCCTTCCCCTTCCCCCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4197:HG2_PB_SVrefine2PB10Xhap12_4198:HG2_PB_pbsv_5822:HG2_PB_PB10Xdip_24124:HG2_PB_PB10Xdip_24123:HG3_PB_SVrefine2PBcRDovetail_2682:HG3_PB_pbsv_5655:HG3_PB_SVrefine2Falcon1Dovetail_3616:HG4_PB_SVrefine2Falcon1Dovetail_3527:HG2_PB_SVrefine2Falcon2Bionano_2876:HG2_PB_SVrefine2Falcon1plusDovetail_9542:HG2_PB_SVrefine2PBcRplusDovetail_8897;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_24123;NumExactMatchSVs=1;ClusterMaxShiftDist=0.205462;ClusterMaxSizeDiff=0.205462;ClusterMaxEditDist=0.306173;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=397;DistBack=37;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=189;REFWIDENED=5:56545547-56545735;PctSeqSimilarity=0.9962;PctSizeSimilarity=0.9925;PctRecOverlap=0.99;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:1/1:0:17:1:16:./.:0:0:0:0:./.:0:2:0/1:2:6:.:.:.
chr5	57717742	HG2_Ill_SVrefine2DISCOVARplusDovetail_10311	T	TTTTTATACCATACTGGTATATGGCATTTTATACCATACTGGTATATGGCGTTTTATACCATACTGGTATATGGCGTTTTATACCATACTGGTATATGGCG	20	PASS	ClusterIDs=HG3_PB_HySA_8945:HG2_PB_SVrefine2Falcon1plusDovetail_9544:HG2_PB_SVrefine2PB10Xhap12_4203:HG3_PB_pbsv_5659:HG2_Ill_SVrefine2DISCOVARplusDovetail_10311:HG2_PB_SVrefine2PBcRplusDovetail_8900;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10311:HG2_PB_SVrefine2PB10Xhap12_4203;NumExactMatchSVs=2;ClusterMaxShiftDist=0.311111;ClusterMaxSizeDiff=0.311111;ClusterMaxEditDist=0.372881;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=100;DistBack=37740;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=124;REFWIDENED=5:57717741-57717867;PctSeqSimilarity=0.996;PctSizeSimilarity=1;PctRecOverlap=0.7525;SizeDiff=0;StartDistance=-25;EndDistance=-25;GTMatch=1;TruScore=91;MatchId=4387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:10:36:1/1:4:14:5:16:./.:0:0:0:0:0/0:21:0:./.:.:.:.:.:.
chr5	58109532	HG2_Ill_Krunchall_8239	A	AAGATATTATTTAACTCTGGACTTAAAGAAGGGACCAGTAAGATGTTGCATAGGCTCAAGGGGATATTCAGTG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7557:HG3_Ill_GATKHC_9599:HG3_Ill_GATKHCSBGrefine_3898:HG2_Ill_GATKHC_9632:HG2_Ill_GATKHCSBGrefine_4050:HG3_Ill_manta_1358:HG2_PB_pbsv_5831:HG3_PB_pbsv_5662:HG3_Ill_svaba_7520:HG3_Ill_Krunchall_8048:HG2_Ill_svaba_7436:HG2_Ill_Krunchall_8239:HG2_Ill_250bpfermikitraw_8076;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7557:HG3_Ill_svaba_7520:HG3_Ill_Krunchall_8048:HG2_Ill_svaba_7436:HG2_Ill_Krunchall_8239:HG2_Ill_250bpfermikitraw_8076;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0671141;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.174497;PBcalls=2;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=69;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=73;REFWIDENED=5:58109533-58109605;PctSeqSimilarity=0.9884;PctSizeSimilarity=0.9861;PctRecOverlap=0.7945;SizeDiff=1;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=92;MatchId=4388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:23:./.:20:10:17:10:./.:0:0:0:0:0/1:14:25:./.:.:.:.:.:.
chr5	61039107	HG2_10X_SVrefine210Xhap12_4226	T	TATAATTAATAGTTATATTAATTATTTTGATGCTTAAATCAAAATCCTTCTTCCTATTTAAGGATATCCTGATTGTCAGTAGGATAAAGGATTTTGATTTAAGCATCAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4226:HG4_PB_assemblyticsfalcon_20918:HG4_PB_SVrefine2Falcon1Dovetail_3538:HG2_PB_pbsv_5842:HG2_PB_assemblyticsfalcon_21419:HG3_PB_pbsv_5672:HG4_PB_pbsv_5875:HG2_PB_PB10Xdip_24181:HG2_PB_PB10Xdip_24180:HG4_Ill_manta_1442:HG4_Ill_MetaSV_4153:HG4_Ill_GATKHCSBGrefine_4134:HG3_Ill_GATKHCSBGrefine_3906:HG2_PB_SVrefine2Falcon1plusDovetail_9555:HG2_Ill_manta_1659:HG2_Ill_GATKHCSBGrefine_4058:HG2_Ill_breakscan11_3575:HG2_Ill_MetaSV_3988:HG4_Ill_SVrefine2DISCOVARDovetail_4293:HG3_PB_SVrefine2PBcRDovetail_2688:HG3_PB_SVrefine2Falcon1Dovetail_3628:HG3_Ill_SVrefine2DISCOVARDovetail_4348:HG2_PB_SVrefine2PBcRplusDovetail_8910:HG2_PB_SVrefine2PB10Xhap12_4216:HG2_PB_SVrefine2Falcon2Bionano_2890:HG2_Ill_SVrefine2DISCOVARplusDovetail_10325;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4226:HG4_Ill_SVrefine2DISCOVARDovetail_4293:HG3_PB_SVrefine2PBcRDovetail_2688:HG3_PB_SVrefine2Falcon1Dovetail_3628:HG3_Ill_SVrefine2DISCOVARDovetail_4348:HG2_PB_SVrefine2PBcRplusDovetail_8910:HG2_PB_SVrefine2PB10Xhap12_4216:HG2_PB_SVrefine2Falcon2Bionano_2890:HG2_Ill_SVrefine2DISCOVARplusDovetail_10325;NumExactMatchSVs=9;ClusterMaxShiftDist=0.115044;ClusterMaxSizeDiff=0.102564;ClusterMaxEditDist=0.226244;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=109;DistBack=19980;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=24;REFWIDENED=5:61039108-61039131;PctSeqSimilarity=0.984;PctSizeSimilarity=1;PctRecOverlap=0.8624;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=94;MatchId=4389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:87:1/1:4:49:1:27:./.:0:0:0:0:0/1:18:29:./.:.:.:.:.:.
chr5	61635350	HG2_Ill_manta_1661	T	TCTGTATTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_24189:HG3_PB_pbsv_5675:HG2_PB_assemblyticsPBcR_20708:HG4_PB_pbsv_5878:HG2_PB_assemblyticsfalcon_21426:HG2_Ill_MetaSV_3991:HG2_PB_pbsv_5846:HG2_PB_SVrefine2PBcRplusDovetail_8913:HG2_PB_SVrefine2PB10Xhap12_4221:HG2_PB_SVrefine2Falcon1plusDovetail_9558:HG2_PB_SVrefine2Falcon2Bionano_2893:HG2_10X_SVrefine210Xhap12_4230:HG4_Ill_GATKHCSBGrefine_4139:HG2_Ill_manta_1661:HG2_Ill_GATKHCSBGrefine_4063:HG3_PB_SVrefine2Falcon1Dovetail_3631:HG3_Ill_MetaSV_4168:HG2_Ill_breakscan11_3576:HG2_PB_HySA_10845:HG2_PB_PB10Xdip_24188;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4063:HG2_Ill_manta_1661:HG4_Ill_GATKHCSBGrefine_4139;NumExactMatchSVs=3;ClusterMaxShiftDist=0.202247;ClusterMaxSizeDiff=0.202247;ClusterMaxEditDist=0.311396;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=3;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=308;DistBack=229;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=5:61635351-61635361;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4390.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:94:1/1:4:41:0:30:./.:0:0:0:0:1/1:0:20:1/1:1:49:.:.:.
chr5	64405470	HG2_PB_SVrefine2Falcon2Bionano_2898	T	TCCTTGACAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTC	20	PASS	ClusterIDs=HG4_PB_pbsv_5889:HG2_PB_pbsv_5860:HG4_Ill_GATKHC_9831:HG4_Ill_GATKHCSBGrefine_4152:HG2_PB_SVrefine2Falcon2Bionano_2898:HG2_Ill_GATKHC_9692:HG4_PB_SVrefine2Falcon1Dovetail_3544:HG2_Ill_breakscan11_3577:HG4_PB_HySA_8689:HG3_PB_SVrefine2Falcon1Dovetail_3639;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHC_9692:HG2_PB_SVrefine2Falcon2Bionano_2898:HG4_Ill_GATKHCSBGrefine_4152:HG4_Ill_GATKHC_9831;NumExactMatchSVs=4;ClusterMaxShiftDist=0.146341;ClusterMaxSizeDiff=0.129032;ClusterMaxEditDist=0.214876;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=5:64405471-64405485;PctSeqSimilarity=0.9844;PctSizeSimilarity=0.9688;PctRecOverlap=0.9692;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4391.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:1|0:1:28:29:0:./.:0:0:0:0:0/1:36:7:./.:.:.:.:.:.
chr5	64467967	HG2_PB_SVrefine2PB10Xhap12_4230	C	CGCGGTGGCTCACACACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAATAATACAAAAAAATTAGCTGGGCGTAGTGGTGGGCGCCTGCAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGAAGCTTGCAGTGAGCTGAGACTGCGCCACTGCACTCCAGCCTGGGTGACACAGCAAGACTCTGTCTCAAAAAAAAAAAAAAGGAAGTTTTCATACAGAATGACAAATAAATGTACTATAAAATATATTAAAGCATCTTTGAAAATGTATTTTCACTGGTTATTTTGAATTTTAGTAAACTGAGTTGAAATTGTAAATGGGAAGAAAAGGACTTAACAACATTTAAAAGAATAATCTCAAATTGACAATGGTAAATTCAGCAAAATTACTAAAACACAAAAACTTCCAACTGACTTTTATACAGTAGACTGCAACAAAGAATATAGAGAAGGAAATGCCTGCCTGGTTTAAAATAAAAATCATGTAGCATGTCTGCTCTGATTCTTTAATAGCATCATATCAATCATGTGTTGTGAAGCCGTCACACTTCTATAGTGAAACATAATTTGACACTTAACTGTATACAGTGCTTAACATTGTCATGTGTATTCTACTTGAGCATTTTGTAAATCAAACTAAACACTGCTATAGAGATGCCAAGCATTACTTATTTTATGATTATATTTCTTTTGTCTCCTCAAAGTGCTGAGCACAGAGCAAGTATACTTAATTACCTTCATGGGTACTGAAAATCTTTGCCCTCTCCTAAATGAAACAAAAGAAGTGTCTAGATGTTACTGTACTCTGGCAATATTGAATTTTGGCCAGAGCTTTGGCAACTACTTATATGAAATGCCATTTTTAATAAGTAAAGGCAGACCCAGCACACAAACAAAATCATGCTGGCCTAAATCACAATATGCCATTATGATTTATTTGAGTCTCAAATATTAGAAAATGACTTGCTACAGGTCAGTTATGAAACTACAGGATAAGGGCATTGATTATGGTTAGATATTTACTTTCTGGGGCATTATTTTTTAATGTAACCTAATAGATTTCCTCTTTGACATTTAGAAGAACAGTACTTAATTTTCCTTCTATCTAAATATACCAACTTGGTCTTTTTTATTAAGAATTTTTTTAATTGGCAAATAAAATTGTCTGTTTATCATGTATGACATGATGTTTTGAAGTATATACCCACTGTGGAGTGACTAAATCTAGCTAGTTAACATATTGCTTCACAAAATTTTAATATTGTGCTGAGAACCGACTTGTTTTTATAGAATTTAAGGTGGCCTACAGAAAGATAACACAATTTAAAAGCAGATAAGACAGAAAAAAGAAAAAATAAGAATTGGAACTTAAGTGGAAATGAGTCTAATATAAAAATACATACCAAATTCCTATATACTTGTTTCCCAATTCATAGCGTCCATCAGATAAAAACAAATCAATTCATGAATAAGTATTAATAATATTTCAAGGATTGTCAATCACATCATCAAACTAATTAAAAACCCCACAACTTTTTTGTGAGTTTTAGAGTAATTATCTCAGCTGGGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3545:HG3_PB_HySA_8998:HG3_PB_pbsv_5690:HG2_PB_PB10Xdip_24212:HG2_PB_pbsv_5861:HG2_PB_PB10Xdip_24213:HG4_PB_HySA_8690:HG4_PB_pbsv_5890:HG2_PB_SVrefine2Falcon2Bionano_2899:HG3_PB_SVrefine2Falcon1Dovetail_3640:HG2_PB_SVrefine2PB10Xhap12_4230:HG2_PB_SVrefine2Falcon1plusDovetail_9566:HG3_PB_SVrefine2PBcRDovetail_2701:HG2_PB_SVrefine2PBcRplusDovetail_8919:HG2_10X_SVrefine210Xhap12_4245;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4230:HG3_PB_SVrefine2Falcon1Dovetail_3640;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0477735;ClusterMaxSizeDiff=0.0454143;ClusterMaxEditDist=0.205203;PBcalls=14;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=1659;DistBack=25514;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=288;REFWIDENED=5:64467968-64468255;PctSeqSimilarity=0.9994;PctSizeSimilarity=0.9994;PctRecOverlap=0.9916;SizeDiff=-1;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=99;MatchId=4392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:0:16:1:35:./.:0:0:0:0:1/1:0:49:0/1:16:132:.:1620:.
chr5	65569622	HG3_PB_assemblyticsfalcon_21392	TAAGAAATCCACCAGATGC	CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_10877:HG2_PB_pbsv_5865:HG2_Ill_breakscan11_3578:HG3_PB_pbsv_5694:HG3_PB_SVrefine2Falcon1Dovetail_3643:HG3_PB_assemblyticsfalcon_21392:HG2_PB_SVrefine2Falcon1plusDovetail_9568;NumClusterSVs=7;ExactMatchIDs=HG3_PB_assemblyticsfalcon_21392;NumExactMatchSVs=1;ClusterMaxShiftDist=0.154312;ClusterMaxSizeDiff=0.154312;ClusterMaxEditDist=0.244275;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=295;DistBack=10444;DistForward=-18;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:65569641-65569621;PctSeqSimilarity=0.9706;PctSizeSimilarity=0.8886;PctRecOverlap=0.9399;SizeDiff=-37;StartDistance=0;EndDistance=18;GTMatch=0;TruScore=93;MatchId=4395.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:33:0|1:34:0:1:25:./.:0:0:0:0:0/0:42:2:0/1:12:18:.:.:.
chr5	68111357	HG2_Ill_GATKHC_9722	A	ATATATATATATATATATATATATATATATATATATATATATATATATATATATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8926:HG4_PB_assemblyticsfalcon_20960:HG2_PB_HySA_10891:HG2_PB_pbsv_5873:HG2_Ill_breakscan11_3579:HG4_Ill_GATKHC_9867:HG4_Ill_GATKHCSBGrefine_4165:HG4_Ill_150bpfermikitraw_7867:HG2_Ill_scalpel_5723:HG2_Ill_GATKHC_9722:HG2_Ill_150bpfermikitraw_7633:HG4_PB_HySA_8720:HG4_PB_pbsv_5901:HG2_PB_SVrefine2PB10Xhap12_4238;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7633:HG2_Ill_GATKHC_9722:HG2_Ill_scalpel_5723:HG4_Ill_150bpfermikitraw_7867:HG4_Ill_GATKHCSBGrefine_4165:HG4_Ill_GATKHC_9867;NumExactMatchSVs=6;ClusterMaxShiftDist=0.252427;ClusterMaxSizeDiff=0.252427;ClusterMaxEditDist=0.31068;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=-9;DistForward=49217;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=5:68111356-68111361;PctSeqSimilarity=0.9815;PctSizeSimilarity=0.963;PctRecOverlap=0.9636;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=4396.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:31:0|1:30:3:1:28:./.:0:0:0:0:0/1:34:13:./.:.:.:.:.:.
chr5	68160585	HG4_Ill_Krunchall_8622	G	GTTCATAACATTCTTATAACACATATATTCTTATAACATATATTTTTATAACTAATAACATATATTCTATATAACATATATTCTTATAACAAAGC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4255:HG2_PB_pbsv_5874:HG3_PB_pbsv_5701:HG4_PB_assemblyticsfalcon_20961:HG2_PB_assemblyticsPBcR_20749:HG4_PB_pbsv_5902:HG4_PB_SVrefine2Falcon1Dovetail_3552:HG4_Ill_svaba_7616:HG4_Ill_manta_1453:HG4_Ill_SVrefine2DISCOVARDovetail_4319:HG4_Ill_Krunchall_8622:HG4_Ill_GATKHC_9868:HG4_Ill_GATKHCSBGrefine_4166:HG4_Ill_Cortex_2937:HG4_Ill_250bpfermikitraw_8211:HG4_Ill_150bpfermikitraw_7868:HG3_PB_SVrefine2PBcRDovetail_2706:HG3_PB_SVrefine2Falcon1Dovetail_3646:HG3_Ill_svaba_7585:HG3_Ill_manta_1369:HG3_Ill_Spiral_6377:HG3_Ill_SVrefine2DISCOVARDovetail_4379:HG3_Ill_Krunchall_8112:HG3_Ill_GATKHC_9682:HG3_Ill_GATKHCSBGrefine_3929:HG3_Ill_Cortex_2945:HG3_Ill_250bpfermikitraw_7842:HG3_Ill_150bpfermikitraw_7666:HG2_PB_SVrefine2PBcRplusDovetail_8927:HG2_PB_SVrefine2PB10Xhap12_4239:HG2_PB_SVrefine2Falcon2Bionano_2905:HG2_PB_SVrefine2Falcon1plusDovetail_9573:HG2_Ill_svaba_7502:HG2_Ill_manta_1669:HG2_Ill_SpiralSDKrefine_13614:HG2_Ill_SVrefine2DISCOVARplusDovetail_10357:HG2_Ill_Krunchall_8307:HG2_Ill_GATKHC_9723:HG2_Ill_GATKHCSBGrefine_4078:HG2_Ill_Cortex_7089:HG2_Ill_250bpfermikitraw_8146:HG2_Ill_150bpfermikitraw_7634;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4255:HG4_PB_SVrefine2Falcon1Dovetail_3552:HG4_Ill_svaba_7616:HG4_Ill_manta_1453:HG4_Ill_SVrefine2DISCOVARDovetail_4319:HG4_Ill_Krunchall_8622:HG4_Ill_GATKHC_9868:HG4_Ill_GATKHCSBGrefine_4166:HG4_Ill_Cortex_2937:HG4_Ill_250bpfermikitraw_8211:HG4_Ill_150bpfermikitraw_7868:HG3_PB_SVrefine2PBcRDovetail_2706:HG3_PB_SVrefine2Falcon1Dovetail_3646:HG3_Ill_svaba_7585:HG3_Ill_manta_1369:HG3_Ill_Spiral_6377:HG3_Ill_SVrefine2DISCOVARDovetail_4379:HG3_Ill_Krunchall_8112:HG3_Ill_GATKHC_9682:HG3_Ill_GATKHCSBGrefine_3929:HG3_Ill_Cortex_2945:HG3_Ill_250bpfermikitraw_7842:HG3_Ill_150bpfermikitraw_7666:HG2_PB_SVrefine2PBcRplusDovetail_8927:HG2_PB_SVrefine2PB10Xhap12_4239:HG2_PB_SVrefine2Falcon2Bionano_2905:HG2_PB_SVrefine2Falcon1plusDovetail_9573:HG2_Ill_svaba_7502:HG2_Ill_manta_1669:HG2_Ill_SpiralSDKrefine_13614:HG2_Ill_SVrefine2DISCOVARplusDovetail_10357:HG2_Ill_Krunchall_8307:HG2_Ill_GATKHC_9723:HG2_Ill_GATKHCSBGrefine_4078:HG2_Ill_Cortex_7089:HG2_Ill_250bpfermikitraw_8146:HG2_Ill_150bpfermikitraw_7634;NumExactMatchSVs=37;ClusterMaxShiftDist=0.052356;ClusterMaxSizeDiff=0.0416667;ClusterMaxEditDist=0.185567;PBcalls=12;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=29;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=94;DistBack=-1;DistForward=7;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=5:68160576-68160594;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4397.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:0:14:0:16:./.:0:0:0:0:1/1:0:54:./.:.:.:.:.:.
chr5	68517835	HG4_Ill_SVrefine2DISCOVARDovetail_4322	A	AGTACAAAAATTAGCTGGGCGTGGTGGCAGGTGCCTATAATCCCAGCTACAGGAGGTCGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAGAAAAGAAAAGAAAACAGAAGAACTCAACAATAAGAAAATAAATAAAAATAAATGACTGAATTTTAAAATGGGCAAAACAGCTGAACAGACACCTCATCAAAGAAAATACATTTTGGGAGGCTGAAGTAGGTGGATTGCTGGAGCCCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACAAAAAATACAAAAGTTAACTGGGTGTGGTGGTGCACCCCTGTAGTCCCAGCTACTTGGGAGGCTGAAGTGGGAGGATCGCTTTAAGTGGGAGGATTGCTTGAGCCTGGGAGGTTGAGGTTGCAGTGAGCTGAGATCATACCACTGTACTCCAGTCTGGGCAACAGAGTGTAACCCTGTCTCAAAAAAAAAAAAATGATATATTTAGATGACATATAAAATATGTGTCATGAGTGACACCTAGGTCTAATGAAAAGATACTCAGCCAGGCATGGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCCGAGATAGACGGTTCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACGTGGCAAAACCCCATCTCTACTAAAAGTACAAAAATTAGCCAGGTGTGGTGGTGTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCATGCCATTGCACTCTAGCCTGGGCGACAGAATGAGACTCCGTCTCAAAAAAAAAAAAAAAAAATGTTAGATGGATAGTTTGACCTTTTCTAGAATGTCGTATGGTTGCAGTCATACAGTGGGAGCCTTTTCAGATTGGCTTCTTAGTTATCCAGCTAATATACAGTTGGAGTTATTTTTTGTCATATTTGTATTTAGAATCTAAAAAGACAATTGAGAAGGGGAAATTTTTGTTTTGTTTTGTTTGAGACAGGGTCTCACTTTATCACACATACTGGAGTGTAGTGGCATGATCATGGCTCACTGCAGCCTTGACCTCCCAAGGTTCAAGTGATCCTCCTGCCTCAGCCCCCCAAATAGCTGGGACTGAAGGTGTGCAGCACCACTCGCAGCTAAGTTTTTGGTATTTTTTGTAGAGACAGAGTTTCGCCATGTTGCCCAGGCTGGTTTCAAACTCCTGAGCTCAAGAAATCCACCTGCCTCAGACTCCCAAATTGCTGAGATTACAGGTGTGAGTCACCACACCCAATCAAGAAGGGGAAATGTGAGCATAAGCTAAATATCAGATGATAGTAGGAATTATTGTTAGTTAAGTGTGGCAAAAGTATTGGGGCTCACCTGAACAAAAACTAGGATGAACTAAGGTGTCTACCATGATTATATTTGGAATCTTGTTAGTTAATAAAGTGACTTTTTTTTTTTGAGATAAGATCTTGCTGTTTTCCAGGCTGCAGTGCAGTAGCATGATCTTGGCTGATTTACTATAGCCTCAACCTCTCGGGCTCAAGTGATCTTCCCACCTAAGCGTTCCAAGTAGCTGGGACTACAGGCCCACGCCACCATGCCTGGCTAACTTTTTAAATTTTTAGTAGACACAGGGTCTCACTATATTGCCCAGGCTGGTCTTGAACTCCTGGGCTCAAGTGATCCTCCTGCCTCAGCCTCTCAAAGTGCTGGGATTACATGCATGAGCCACTGAGCCTGGCTTCACTGCTTTCAAATTGGAAAAAAAAAAAGTATTGGAGTTATGATTTAACAAAAATTCTGTTTGTCAGAATGTGTGGAAGATATTAACAGATGAGATGGGATTAAATGTATGGGATTTGTTTAATCGGGGAAGGGATGATGAAATAAGATTGACTATATTATTGTTGAAGTTGTGTGATGAATATATCAGGGTTTATTGTATTTGTTTATTTATTATTAATTTTTTTTTTAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCCATCTTGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCGCCACCACGCCCGGCTACTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTCAAACTCCTGACCTCATGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTATATCAGGGTTTATTTTATACCGTTCTACTTTTTTGCATTTAAAACACTTTCTAGGGCTGGGTGCAGTGGCTCATGCCTGTAATCCCTGTACTTTGGGCGGCCAAGGCAGGAGGATTGCTTAAGCCCAAGAGTTCAAGACCCACCTAAGGAACATAGGGAGATCCCATCTCCACAAAAAATTTTAAAAATTAGCCAGGCGTGGTGGTGCACACTTGTAGTCCCATTACTTTCGAGGCTAAGGTGGGAGGATCCCTTGAGCCTGGGAGGTTGAGGCTGTAATGAGCTGTGATCATACCACTGCACTAGGTGACAAGAGCAAGACCCTATCTCAAAATAAAAATTTTTTTTGTTAAAAAGTAGGGATACCAAACAGTGGGAATTTAATTTATAGGACCATATTATTATTATTATTGGTTGTTTTTTGTTTTTGTTTTTTTTTTTTAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTACAGTCTTGGCTCACTGCAACCTCCGCCTCCTGAGTTCAAGTGATTTCTCATGCCCCAGCCTCCTGAGTAGCTGGGATCACAGGCGTGCGCCACCACACGCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGACCAGGTTGGTCTTGAACTCCTGACCTCAAGTGATCTGTCCACTTCAGCCTTCCAAAGTGCTGGGATTACAGGTGTTAGACACTGTGCCCAGCCTATAAGGCCATATTAAATCATGTTTTTAAGTATATAAAAGCAATGTTGCAAATGATTTCCTTCTCTGCAGTGTAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3553:HG2_PB_pbsv_5875:HG2_Ill_breakscan11_3580:HG3_PB_pbsv_5704:HG2_PB_HySA_10895:HG2_PB_PB10Xdip_24259:HG3_PB_HySA_9032:HG2_PB_SVrefine2PB10Xhap12_4240:HG3_PB_SVrefine2Falcon1Dovetail_3647:HG2_Ill_SVrefine2DISCOVARplusDovetail_10360:HG2_10X_SVrefine210Xhap12_4256:HG4_Ill_SVrefine2DISCOVARDovetail_4322:HG3_Ill_SVrefine2DISCOVARDovetail_4384:HG3_PB_SVrefine2PBcRDovetail_2707;NumClusterSVs=14;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_4322;NumExactMatchSVs=1;ClusterMaxShiftDist=0.124484;ClusterMaxSizeDiff=0.124484;ClusterMaxEditDist=0.262494;PBcalls=9;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=3145;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=5:68517836-68517840;PctSeqSimilarity=0.9987;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4399.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:23:69:./.:22:12:0:31:./.:0:0:0:0:0/1:25:12:0/1:83:240:.:3177:.
chr5	68632991	HG2_Ill_GATKHC_9731	A	AATATATACATAATATATAATATATACATAATATATAATATAATATACCATAATATACATAATATATAATATATAATGTATATATT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4258:HG4_PB_assemblyticsfalcon_20966:HG4_PB_SVrefine2Falcon1Dovetail_3554:HG3_PB_assemblyticsfalcon_21412:HG4_PB_pbsv_5903:HG2_Ill_breakscan11_3581:HG4_Ill_Krunchall_8626:HG4_Ill_GATKHC_9876:HG4_Ill_GATKHCSBGrefine_4167:HG4_Ill_250bpfermikitraw_8214:HG4_Ill_150bpfermikitraw_7874:HG3_PB_SVrefine2Falcon1Dovetail_3648:HG3_Ill_Spiral_6380:HG3_Ill_Krunchall_8119:HG3_Ill_GATKHC_9689:HG3_Ill_GATKHCSBGrefine_3930:HG3_Ill_250bpfermikitraw_7846:HG3_Ill_150bpfermikitraw_7670:HG2_Ill_SpiralSDKrefine_13615:HG2_Ill_Krunchall_8312:HG2_Ill_GATKHC_9731:HG2_Ill_GATKHCSBGrefine_4079:HG2_Ill_250bpfermikitraw_8152:HG2_Ill_150bpfermikitraw_7640:HG2_PB_PB10Xdip_24261:HG2_PB_PB10Xdip_24260:HG3_PB_pbsv_5705:HG2_PB_SVrefine2Falcon1plusDovetail_9574:HG4_Ill_SVrefine2DISCOVARDovetail_4323:HG3_PB_SVrefine2PBcRDovetail_2708:HG3_Ill_SVrefine2DISCOVARDovetail_4385:HG2_PB_SVrefine2PBcRplusDovetail_8928:HG2_PB_SVrefine2PB10Xhap12_4241:HG2_PB_SVrefine2Falcon2Bionano_2906:HG2_Ill_SVrefine2DISCOVARplusDovetail_10361;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7640:HG2_Ill_250bpfermikitraw_8152:HG2_Ill_GATKHCSBGrefine_4079:HG2_Ill_GATKHC_9731:HG2_Ill_Krunchall_8312:HG2_Ill_SpiralSDKrefine_13615:HG3_Ill_150bpfermikitraw_7670:HG3_Ill_250bpfermikitraw_7846:HG3_Ill_GATKHCSBGrefine_3930:HG3_Ill_GATKHC_9689:HG3_Ill_Krunchall_8119:HG3_Ill_Spiral_6380:HG3_PB_SVrefine2Falcon1Dovetail_3648:HG4_Ill_150bpfermikitraw_7874:HG4_Ill_250bpfermikitraw_8214:HG4_Ill_GATKHCSBGrefine_4167:HG4_Ill_GATKHC_9876:HG4_Ill_Krunchall_8626;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0930233;ClusterMaxSizeDiff=0.0578035;ClusterMaxEditDist=0.187135;PBcalls=13;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=85;DistBack=7;DistForward=40270;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1472;REFWIDENED=5:68632957-68623224;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:3:29:0:24:./.:0:0:0:0:1/1:1:43:./.:.:.:.:.:.
chr5	73499704	HG3_Ill_250bpfermikitraw_7873	A	ATAATATATAATATATAATATATATATATATAATATATAATATATAATATATATATATT	20	PASS	ClusterIDs=HG3_PB_pbsv_5720:HG3_Ill_Spiral_6403:HG3_Ill_GATKHC_9726:HG3_Ill_GATKHCSBGrefine_3940:HG2_Ill_GATKHC_9772:HG2_Ill_GATKHCSBGrefine_4089:HG4_Ill_GATKHC_9911:HG4_Ill_GATKHCSBGrefine_4178:HG3_Ill_scalpel_5829:HG3_Ill_250bpfermikitraw_7873:HG3_Ill_150bpfermikitraw_7700:HG2_Ill_scalpel_5749:HG2_Ill_Krunchall_8343:HG2_Ill_250bpfermikitraw_8180:HG2_Ill_150bpfermikitraw_7672:HG4_Ill_250bpfermikitraw_8241:HG4_Ill_150bpfermikitraw_7905:HG3_Ill_Krunchall_8148;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7672:HG2_Ill_250bpfermikitraw_8180:HG2_Ill_Krunchall_8343:HG2_Ill_scalpel_5749:HG3_Ill_150bpfermikitraw_7700:HG3_Ill_250bpfermikitraw_7873:HG3_Ill_scalpel_5829;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0884956;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.183486;PBcalls=1;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=8;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=14;DistForward=29;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=81;REFWIDENED=5:73499675-73499755;PctSeqSimilarity=0.9739;PctSizeSimilarity=0.9483;PctRecOverlap=0.9322;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4402.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:17:./.:17:11:17:5:./.:0:0:0:0:0/1:25:12:./.:.:.:.:.:.
chr5	75462367	HG3_Ill_GATKHC_9743	G	GCTACCTTTGTAGATGTCATCATTTGGTATTATGGTGAGCAGTCCCACAAATATCTAGGAGCTAGGAATTAAAATAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_8761:HG4_PB_assemblyticsfalcon_21003:HG4_PB_pbsv_5921:HG4_Ill_Krunchall_8667:HG4_Ill_GATKHC_9922:HG4_Ill_GATKHCSBGrefine_4182:HG3_Ill_Krunchall_8163:HG3_Ill_GATKHC_9743:HG3_Ill_GATKHCSBGrefine_3946:HG3_Ill_250bpfermikitraw_7886:HG2_Ill_Krunchall_8353:HG2_Ill_GATKHC_9787:HG2_Ill_GATKHCSBGrefine_4094:HG2_Ill_250bpfermikitraw_8192:HG2_PB_HySA_10943:HG2_PB_pbsv_5894:HG3_PB_HySA_9074:HG3_PB_pbsv_5726;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8192:HG2_Ill_GATKHCSBGrefine_4094:HG2_Ill_GATKHC_9787:HG2_Ill_Krunchall_8353:HG3_Ill_250bpfermikitraw_7886:HG3_Ill_GATKHCSBGrefine_3946:HG3_Ill_GATKHC_9743:HG3_Ill_Krunchall_8163:HG4_Ill_GATKHCSBGrefine_4182:HG4_Ill_GATKHC_9922:HG4_Ill_Krunchall_8667:HG4_PB_assemblyticsfalcon_21003;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0621118;ClusterMaxSizeDiff=0.0372671;ClusterMaxEditDist=0.275;PBcalls=7;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=78;DistBack=19752;DistForward=63;DistMin=63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=157;REFWIDENED=5:75462276-75462432;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4403.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:40:0|1:29:3:1:35:./.:0:0:0:0:0/1:17:20:./.:.:.:.:.:.
chr5	76690953	HG2_PB_SVrefine2Falcon2Bionano_2918	C	CTTTTTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCACACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCGCCACCACACCCGGCTACTTTTTGTATTTTTAGTAGAGAGGGGGTTTCACTGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGTGCCCGGCCAATTCAATTTATTTTTTATTTATTTAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3666:HG3_PB_pbsv_5732:HG2_PB_pbsv_5899:HG4_PB_pbsv_5931:HG3_PB_HySA_9084:HG4_Ill_MetaSV_4172:HG4_Ill_GATKHC_9931:HG4_Ill_GATKHCSBGrefine_4185:HG2_Ill_GATKHC_9799:HG2_Ill_GATKHCSBGrefine_4097:HG2_Ill_MetaSV_4009:HG3_Ill_GATKHC_9756:HG3_Ill_MetaSV_4184:HG2_PB_HySA_10951:HG4_PB_HySA_8766:HG2_PB_PB10Xdip_24341:HG2_PB_PB10Xdip_24340:HG4_PB_SVrefine2Falcon1Dovetail_3570:HG3_PB_SVrefine2PBcRDovetail_2731:HG2_PB_SVrefine2PBcRplusDovetail_8945:HG2_PB_SVrefine2PB10Xhap12_4268:HG2_PB_SVrefine2Falcon2Bionano_2918:HG2_PB_SVrefine2Falcon1plusDovetail_9593:HG2_Ill_SVrefine2DISCOVARplusDovetail_10391:HG2_10X_SVrefine210Xhap12_4286:HG3_Ill_SVrefine2DISCOVARDovetail_4413;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4286:HG2_Ill_SVrefine2DISCOVARplusDovetail_10391:HG2_PB_SVrefine2Falcon1plusDovetail_9593:HG2_PB_SVrefine2Falcon2Bionano_2918:HG2_PB_SVrefine2PB10Xhap12_4268:HG2_PB_SVrefine2PBcRplusDovetail_8945:HG3_PB_SVrefine2PBcRDovetail_2731:HG4_PB_SVrefine2Falcon1Dovetail_3570;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0739599;ClusterMaxSizeDiff=0.0647149;ClusterMaxEditDist=0.219436;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=313;DistBack=23;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=283;REFWIDENED=5:76690954-76691236;PctSeqSimilarity=0.9766;PctSizeSimilarity=0.9968;PctRecOverlap=0.1651;SizeDiff=-1;StartDistance=-262;EndDistance=-262;GTMatch=0;TruScore=71;MatchId=4404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:2:18:2:20:./.:0:0:0:0:1/1:0:16:1/1:1:40:.:.:.
chr5	76716195	HG2_Ill_GATKHCSBGrefine_4098	T	TAAAACCTACTCATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3582:HG2_PB_pbsv_5900:HG2_PB_assemblyticsfalcon_21521:HG3_PB_HySA_9086:HG3_PB_pbsv_5733:HG2_PB_SVrefine2Falcon2Bionano_2919:HG2_Ill_MetaSV_4010:HG2_Ill_GATKHCSBGrefine_4098:HG3_PB_SVrefine2Falcon1Dovetail_3667:HG2_PB_SVrefine2Falcon1plusDovetail_9594;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4098:HG2_Ill_MetaSV_4010;NumExactMatchSVs=2;ClusterMaxShiftDist=0.112853;ClusterMaxSizeDiff=0.112853;ClusterMaxEditDist=0.197269;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=23343;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:76716196-76716209;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4405.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:49:1|0:6:30:43:2:./.:0:0:0:0:0/1:41:9:0/1:7:35:.:.:.
chr5	76882546	HG2_10X_SVrefine210Xhap12_4288	C	CTTTTTTTTTTTTTTTTGAGACAGAGTCTCCCTCTGTTACCAGGCTGGAGAGCAGTGGTAGGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGCCAGTACGCCTGGCTAATTTTTTGTATTTTTAATAGAGATGGGGTTTCACCATCTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCCATGCCTGGCCTATTACCTAAACTTTTTAAATCTAATGTTTTGGTTGAAGTATCACTTACATACAGAAAAGTGCACAAATCTGAATTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2921:HG3_PB_SVrefine2Falcon1Dovetail_3668:HG2_PB_HySA_10952:HG4_PB_HySA_8767:HG2_PB_pbsv_5901:HG4_PB_pbsv_5932:HG4_Ill_manta_1462:HG4_Ill_MetaSV_4173:HG4_Ill_GATKHCSBGrefine_4186:HG2_Ill_MetaSV_4011:HG2_Ill_GATKHCSBGrefine_4099:HG4_PB_SVrefine2PBcRDovetail_2933:HG4_PB_SVrefine2Falcon1Dovetail_3571:HG4_Ill_SVrefine2DISCOVARDovetail_4351:HG2_Ill_SVrefine2DISCOVARplusDovetail_10393:HG2_10X_SVrefine210Xhap12_4288;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4288:HG2_Ill_SVrefine2DISCOVARplusDovetail_10393:HG4_Ill_SVrefine2DISCOVARDovetail_4351:HG4_PB_SVrefine2Falcon1Dovetail_3571:HG4_PB_SVrefine2PBcRDovetail_2933;NumExactMatchSVs=5;ClusterMaxShiftDist=0.065189;ClusterMaxSizeDiff=0.0628272;ClusterMaxEditDist=0.209699;PBcalls=8;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=373;DistBack=34705;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=296;REFWIDENED=5:76882547-76882842;PctSeqSimilarity=0.968;PctSizeSimilarity=0.992;PctRecOverlap=0.2918;SizeDiff=-3;StartDistance=-265;EndDistance=-265;GTMatch=0;TruScore=75;MatchId=4406.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:28:./.:41:20:1:5:./.:0:0:0:0:0/1:4:6:0/1:3:10:.:.:.
chr5	77090772	HG4_PB_pbsv_5936	C	CCCCCACCTACCCTCCCGGACGGGGCGGGCTGGCCGGGGCAGAGGGCTCCTCACTTTCCCAGTAGGGGCGGCGGGCAGAGGCGCCCTCACCTCCCGGACGGGCGCGGGCTGCCGGGCGTGGGCTGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2922:HG3_PB_pbsv_5736:HG2_PB_pbsv_5904:HG4_PB_pbsv_5936:HG3_PB_SVrefine2PBcRDovetail_2734:HG3_PB_SVrefine2Falcon1Dovetail_3671;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_5936;NumExactMatchSVs=1;ClusterMaxShiftDist=0.063745;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.207171;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=125;DistBack=2;DistForward=14445;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=155;REFWIDENED=5:77090654-77090808;PctSeqSimilarity=0.9451;PctSizeSimilarity=0.992;PctRecOverlap=0.984;SizeDiff=1;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=97;MatchId=4407.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:33:0|1:24:5:1:22:./.:0:0:0:0:0/0:14:0:./.:.:.:.:.:.
chr5	77290513	HG2_PB_SVrefine2Falcon2Bionano_2924	G	GCCCCATCCAGCAAGCCCTCCTCTGCCTCCTGACCCCATCCAGCAAGCCCTCCTCTGCCTCCTGACCCCATCCAGCAAGCCCTCCTCTGCCTCCTGA	10	PASS	ClusterIDs=HG2_PB_HySA_10958:HG3_PB_pbsv_5738:HG2_PB_SVrefine2PBcRplusDovetail_8949:HG2_PB_pbsv_5907:HG2_PB_SVrefine2Falcon2Bionano_2924:HG2_PB_SVrefine2Falcon1plusDovetail_9598;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_10958:HG2_PB_SVrefine2PBcRplusDovetail_8949:HG2_PB_SVrefine2Falcon2Bionano_2924:HG2_PB_SVrefine2Falcon1plusDovetail_9598;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0603015;ClusterMaxSizeDiff=0.0502513;ClusterMaxEditDist=0.278607;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=96;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=162;REFWIDENED=5:77290514-77290675;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4408.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:44:./.:19:9:2:30:./.:0:0:0:0:0/0:8:0:./.:.:.:.:.:.
chr5	77654169	HG2_Ill_manta_1683	T	TAAAAAATAAAAAATGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAAAAATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8951:HG2_PB_pbsv_5911:HG3_PB_HySA_9094:HG4_PB_pbsv_5942:HG4_PB_assemblyticsfalcon_21026:HG2_PB_assemblyticsfalcon_21536:HG3_PB_SVrefine2Falcon1Dovetail_3674:HG2_Ill_breakscan11_3583:HG4_PB_HySA_8776:HG3_PB_SVrefine2PBcRDovetail_2737:HG2_PB_SVrefine2Falcon2Bionano_2925:HG4_PB_SVrefine2Falcon1Dovetail_3576:HG4_Ill_MetaSV_4178:HG4_Ill_GATKHCSBGrefine_4192:HG3_Ill_GATKHCSBGrefine_3953:HG2_Ill_manta_1683:HG2_Ill_GATKHCSBGrefine_4106:HG2_10X_SVrefine210Xhap12_4297:HG2_PB_SVrefine2Falcon1plusDovetail_9600:HG4_PB_SVrefine2PBcRDovetail_2939:HG2_PB_SVrefine2PB10Xhap12_4275;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4297:HG2_Ill_GATKHCSBGrefine_4106:HG2_Ill_manta_1683:HG3_Ill_GATKHCSBGrefine_3953:HG4_Ill_GATKHCSBGrefine_4192:HG4_Ill_MetaSV_4178:HG4_PB_SVrefine2Falcon1Dovetail_3576;NumExactMatchSVs=7;ClusterMaxShiftDist=0.15873;ClusterMaxSizeDiff=0.15873;ClusterMaxEditDist=0.24;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=319;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=5:77654170-77654187;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:44:./.:17:10:5:21:./.:0:0:0:0:0/1:32:15:./.:5:39:.:.:.
chr5	77743925	HG2_PB_PB10Xdip_24351	A	CCTCTCCCCCTCCCCCTTCCCCTCTTCCACTCCTCCCTCCTCCCCGCTCCTCTCCCCTCCTCCTCCTTCCTCCTCCTTCCTCCCCTTTCCTCCCCCCC	20	PASS	ClusterIDs=HG3_PB_HySA_9099:HG4_PB_assemblyticsfalcon_21032:HG3_PB_SVrefine2PBcRDovetail_2739:HG2_PB_SVrefine2PBcRplusDovetail_8953:HG2_PB_SVrefine2PB10Xhap12_4279:HG2_PB_SVrefine2Falcon2Bionano_2927:HG2_PB_PB10Xdip_24351:HG2_PB_PB10Xdip_24350:HG2_10X_SVrefine210Xhap12_4300:HG4_PB_SVrefine2PBcRDovetail_2941:HG4_PB_SVrefine2Falcon1Dovetail_3578:HG2_PB_pbsv_5914:HG2_PB_HySA_10966:HG4_PB_pbsv_5945:HG3_PB_SVrefine2Falcon1Dovetail_3677:HG2_PB_assemblyticsfalcon_21543:HG2_PB_SVrefine2Falcon1plusDovetail_9603;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4300:HG2_PB_PB10Xdip_24350:HG2_PB_PB10Xdip_24351:HG2_PB_SVrefine2Falcon2Bionano_2927:HG2_PB_SVrefine2PB10Xhap12_4279:HG2_PB_SVrefine2PBcRplusDovetail_8953:HG3_PB_SVrefine2PBcRDovetail_2739;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0641711;ClusterMaxSizeDiff=0.0631579;ClusterMaxEditDist=0.224599;PBcalls=16;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=97;DistBack=0;DistForward=4225;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9331;REFWIDENED=5:77743926-77736283;PctSeqSimilarity=0.9949;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4410.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:1/1:3:20:0:21:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr5	78035992	HG2_Ill_manta_1685	A	AACGCGCTGGAGGTGTCACTGACCCATTTACAATGAACACAGCTGAGGCCCATGCTCCAGGT	20	PASS	ClusterIDs=HG2_PB_pbsv_5916:HG4_Ill_Cortex_2947:HG3_Ill_Cortex_2957:HG2_Ill_Cortex_7117:HG4_PB_pbsv_5949:HG2_PB_HySA_10972:HG4_Ill_svaba_7675:HG4_Ill_manta_1467:HG4_Ill_Krunchall_8694:HG4_Ill_GATKHC_9946:HG4_Ill_GATKHCSBGrefine_4198:HG4_Ill_250bpfermikitraw_8271:HG4_Ill_150bpfermikitraw_7933:HG3_Ill_svaba_7652:HG3_Ill_manta_1384:HG3_Ill_Spiral_6431:HG3_Ill_Krunchall_8192:HG3_Ill_GATKHCSBGrefine_3956:HG3_Ill_250bpfermikitraw_7908:HG3_Ill_150bpfermikitraw_7728:HG2_Ill_svaba_7567:HG2_Ill_manta_1685:HG2_Ill_SpiralSDKrefine_13673:HG2_Ill_Krunchall_8378:HG2_Ill_GATKHC_9815:HG2_Ill_GATKHCSBGrefine_4111:HG2_Ill_250bpfermikitraw_8212:HG3_PB_pbsv_5748;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8212:HG2_Ill_GATKHCSBGrefine_4111:HG2_Ill_GATKHC_9815:HG2_Ill_Krunchall_8378:HG2_Ill_SpiralSDKrefine_13673:HG2_Ill_manta_1685:HG2_Ill_svaba_7567:HG3_Ill_150bpfermikitraw_7728:HG3_Ill_250bpfermikitraw_7908:HG3_Ill_GATKHCSBGrefine_3956:HG3_Ill_Krunchall_8192:HG3_Ill_Spiral_6431:HG3_Ill_manta_1384:HG3_Ill_svaba_7652:HG4_Ill_150bpfermikitraw_7933:HG4_Ill_250bpfermikitraw_8271:HG4_Ill_GATKHCSBGrefine_4198:HG4_Ill_GATKHC_9946:HG4_Ill_Krunchall_8694:HG4_Ill_manta_1467:HG4_Ill_svaba_7675;NumExactMatchSVs=21;ClusterMaxShiftDist=0.047619;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.188976;PBcalls=4;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=35245;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=5:78035991-78035993;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4411.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:52:0|1:23:0:2:43:./.:0:0:0:0:0/1:25:26:./.:.:.:.:.:.
chr5	78045516	HG3_Ill_GATKHCSBGrefine_3957	C	CATATATATATATATATATACATATATATATATATATATACACATATATATATATATGTAT	20	PASS	ClusterIDs=HG4_PB_HySA_8786:HG3_Ill_manta_1385:HG3_Ill_Spiral_6432:HG2_Ill_manta_1686:HG2_PB_pbsv_5917:HG2_PB_PB10Xdip_24353:HG2_PB_PB10Xdip_24352:HG2_PB_HySA_10973:HG4_Ill_150bpfermikitraw_7934:HG2_Ill_Krunchall_8379:HG3_Ill_Krunchall_8193:HG3_Ill_GATKHC_9771:HG3_Ill_GATKHCSBGrefine_3957:HG3_Ill_250bpfermikitraw_7909:HG3_Ill_150bpfermikitraw_7729:HG2_Ill_GATKHC_9816:HG2_Ill_GATKHCSBGrefine_4112:HG2_Ill_250bpfermikitraw_8213:HG2_Ill_150bpfermikitraw_7700:HG4_Ill_GATKHC_9947:HG4_Ill_GATKHCSBGrefine_4199:HG4_Ill_250bpfermikitraw_8272;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7700:HG2_Ill_250bpfermikitraw_8213:HG2_Ill_GATKHCSBGrefine_4112:HG2_Ill_GATKHC_9816:HG3_Ill_150bpfermikitraw_7729:HG3_Ill_250bpfermikitraw_7909:HG3_Ill_GATKHCSBGrefine_3957:HG3_Ill_GATKHC_9771:HG3_Ill_Krunchall_8193;NumExactMatchSVs=9;ClusterMaxShiftDist=0.165414;ClusterMaxSizeDiff=0.165414;ClusterMaxEditDist=0.192593;PBcalls=5;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:78045517-78045532;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:1:14:0:15:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr5	78113991	HG3_PB_SVrefine2PBcRDovetail_2741	A	AAGATCTCTGATATACAATTAAGATCTCTGTGGATCTCTGATATACAGCTAAGATCTCTGTAGATCTCTGATACACAACTAAGATCTCTGTAGATCTCTGATACACAACTAAGATCTCTGTAGATCTCTGATATACAACTAAGATCTCTGTAGATCTCTGATACACAACTAAGATCTCTGT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10404:HG4_PB_pbsv_5951:HG4_Ill_250bpfermikitraw_8273:HG2_PB_PB10Xdip_24355:HG2_PB_PB10Xdip_24354:HG2_PB_HySA_10974:HG3_PB_pbsv_5750:HG2_PB_pbsv_5918:HG4_PB_HySA_8787:HG3_PB_HySA_9104:HG4_PB_SVrefine2PBcRDovetail_2944:HG4_PB_SVrefine2Falcon1Dovetail_3579:HG3_PB_SVrefine2PBcRDovetail_2741:HG3_PB_SVrefine2Falcon1Dovetail_3679:HG3_Ill_SVrefine2DISCOVARDovetail_4421:HG2_PB_SVrefine2PBcRplusDovetail_8955:HG2_PB_SVrefine2PB10Xhap12_4281:HG2_PB_SVrefine2Falcon2Bionano_2929:HG2_PB_SVrefine2Falcon1plusDovetail_9605;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10404:HG4_PB_SVrefine2PBcRDovetail_2944:HG4_PB_SVrefine2Falcon1Dovetail_3579:HG3_PB_SVrefine2PBcRDovetail_2741:HG3_PB_SVrefine2Falcon1Dovetail_3679:HG3_Ill_SVrefine2DISCOVARDovetail_4421:HG2_PB_SVrefine2PBcRplusDovetail_8955:HG2_PB_SVrefine2PB10Xhap12_4281:HG2_PB_SVrefine2Falcon2Bionano_2929:HG2_PB_SVrefine2Falcon1plusDovetail_9605;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0901857;ClusterMaxSizeDiff=0.0901857;ClusterMaxEditDist=0.233766;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=180;DistBack=48088;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=172;REFWIDENED=5:78113992-78114163;PctSeqSimilarity=0.9912;PctSizeSimilarity=1;PctRecOverlap=0.4309;SizeDiff=0;StartDistance=-103;EndDistance=-103;GTMatch=0;TruScore=80;MatchId=4413.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:2:24:1:13:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr5	78280723	HG2_Ill_GATKHCSBGrefine_4115	G	GGGCGGGGGCGGCGCGGGCGGCGGGGGCGGCGCGGGCGGCGGGGGCGGCGCGGGCGGCGGGGGCGGCGCGGGCGGCGGGGGCGGCGCGGGCGGCGGGGGCGGCGCGGGC	20	PASS	ClusterIDs=HG3_PB_pbsv_5752:HG3_PB_SVrefine2Falcon1Dovetail_3681:HG2_PB_SVrefine2Falcon1plusDovetail_9606:HG2_PB_pbsv_5921:HG2_PB_HySA_10978:HG3_PB_HySA_9106:HG3_Ill_Spiral_6437:HG2_PB_SVrefine2Falcon2Bionano_2931:HG2_Ill_Krunchall_8384:HG2_Ill_GATKHCSBGrefine_4115:HG2_Ill_breakscan11_3584;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4115:HG2_Ill_Krunchall_8384:HG2_PB_SVrefine2Falcon2Bionano_2931:HG3_Ill_Spiral_6437;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.230415;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=108;DistBack=4;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=5:78280724-78280756;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4414.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:32:./.:13:26:12:4:./.:0:0:0:0:0/1:21:14:./.:.:.:.:.:.
chr5	78426566	HG2_PB_SVrefine2PB10Xhap12_4282	C	CCGCTCTCCTCTCCCTCCCTCTCCCTCCCTCCTCCTCCCCTCCCCCTCCCCTCCCCTCTCCCTCACGGTCTCCCTCTGATGCGAGCAAGGTGGACGGTACTGCTGCATCTCGGTCATGCAACTCCTGCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCACCGCCACGCCTGACTGGTTTTCGTTTTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAGCCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTGCAACCACCTGCCAGCCGCCTGCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTGGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCAGCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAACCACCCCGTCTGGGAAATGAGGAGCGTCTCCGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGATCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAAACGCCCCATCCGGGAGGGAGGCGGGGGGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCAGCCAGACGCCCCGTCCAGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCGGGAGGGAGGTGGGGGGTCATCCCCCCACCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTTCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGACAGCCCCCGCCCAGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGTTCTGTGACCTTATCCCAACCTGTCTCTGAAACATGGCTGTGTCACTCAGGTTAAATGGATTAAGGCGGTGCAAGATGTGCTTTGTTAAACATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCTAATCTTAAGTACCAGGACACAAACACTGCGAAGGCAAGCGCAGGTCTTGCTAGAAACAGAGACCTTTGTTCACTTTTTATCTGCTGACTTCCTACTATTGTCTATGACCCTGCAATCCTCTGCAAAACACCAAGAATGATCAATAAAAAAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAAAAGAATCATGGAA	10	PASS	ClusterIDs=HG3_PB_HySA_9107:HG2_PB_PB10Xdip_24372:HG3_PB_pbsv_5753:HG4_PB_HySA_8789:HG2_PB_pbsv_5922:HG2_PB_SVrefine2PB10Xhap12_4282:HG4_PB_pbsv_5955:HG2_PB_assemblyticsfalcon_21554:HG4_PB_assemblyticsfalcon_21039:HG2_PB_HySA_10979:HG3_PB_SVrefine2Falcon1Dovetail_3682:HG2_PB_SVrefine2Falcon1plusDovetail_9607:HG4_PB_SVrefine2Falcon1Dovetail_3581:HG2_PB_SVrefine2PBcRplusDovetail_8958:HG2_PB_SVrefine2Falcon2Bionano_2932:HG4_PB_SVrefine2PBcRDovetail_2945:HG3_PB_SVrefine2PBcRDovetail_2743;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4282;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0630666;ClusterMaxSizeDiff=0.0630666;ClusterMaxEditDist=0.231951;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=2450;DistBack=2;DistForward=6245;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:78426567-78426567;PctSeqSimilarity=0.9844;PctSizeSimilarity=0.9691;PctRecOverlap=0.9692;SizeDiff=-78;StartDistance=17;EndDistance=17;GTMatch=0;TruScore=97;MatchId=4415.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:46:0|1:24:0:0:29:./.:0:0:0:0:0/1:35:5:0/1:79:192:.:2608:.
chr5	78475071	HG4_Ill_GATKHCSBGrefine_4202	T	TTAGTATATATACTAAGTATATATACTAGTATATATACTAAGTATATATAC	20	PASS	ClusterIDs=HG3_Ill_150bpfermikitraw_7738:HG4_Ill_scalpel_5685:HG2_PB_HySA_10980:HG4_Ill_Krunchall_8701:HG4_Ill_GATKHCSBGrefine_4202:HG4_Ill_250bpfermikitraw_8280:HG4_Ill_150bpfermikitraw_7941:HG3_Ill_scalpel_5868:HG3_Ill_GATKHC_9783:HG3_Ill_GATKHCSBGrefine_3960:HG3_Ill_250bpfermikitraw_7921:HG3_Ill_150bpfermikitraw_7739:HG2_Ill_scalpel_5779:HG2_Ill_Krunchall_8386:HG2_Ill_GATKHC_9822:HG2_Ill_GATKHCSBGrefine_4116:HG2_Ill_250bpfermikitraw_8217:HG2_Ill_150bpfermikitraw_7702:HG2_PB_PB10Xdip_24373:HG4_Ill_svaba_7679:HG4_Ill_150bpfermikitraw_7940:HG2_PB_pbsv_5923:HG3_Ill_250bpfermikitraw_7920;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7702:HG2_Ill_250bpfermikitraw_8217:HG2_Ill_GATKHCSBGrefine_4116:HG2_Ill_GATKHC_9822:HG2_Ill_Krunchall_8386:HG2_Ill_scalpel_5779:HG3_Ill_150bpfermikitraw_7739:HG3_Ill_250bpfermikitraw_7921:HG3_Ill_GATKHCSBGrefine_3960:HG3_Ill_GATKHC_9783:HG3_Ill_scalpel_5868:HG4_Ill_150bpfermikitraw_7941:HG4_Ill_250bpfermikitraw_8280:HG4_Ill_GATKHCSBGrefine_4202:HG4_Ill_Krunchall_8701:HG4_Ill_scalpel_5685;NumExactMatchSVs=16;ClusterMaxShiftDist=0.196078;ClusterMaxSizeDiff=0.196078;ClusterMaxEditDist=0.32;PBcalls=3;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=11;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=52;REFWIDENED=5:78475070-78475124;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:4:27:1/1:2:10:0:6:./.:0:0:0:0:1/1:3:49:./.:.:.:.:.:.
chr5	78476455	HG4_PB_SVrefine2Falcon1Dovetail_3584	A	GGAAGGGAGGAAGGGAAGGGAAAGGGAAGGGGAAGGAAGGGAAGGGAAGGAAGGGAAGGAAGGGAAGGGAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGAAGGGAAGGGAAGGGAAGGGAAGGAAGGGAAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGAAGGGAAGAAGGAAGGAAGGGAGGGAAGGGAAGGGAAGGAAGGGAAGGAAGGGAAGGGAAGGGAAGGAAGGGAAGGGAAGGGAGGGAAGGGAAGGGAAGGGAAGGAAGGGAAGGGAAGGAAGGAAGGGAAGGGGGAAGGGAAGGAAGGGAAGGAAGGAAGGGAAGGGAGGGAAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAGGGAAGGGAAGGGGAAGGGAAGGAAGGGAAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGGAAGGGAAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4283:HG4_PB_assemblyticsfalcon_21043:HG4_PB_SVrefine2Falcon1Dovetail_3584:HG3_PB_pbsv_5756:HG2_PB_pbsv_5924:HG4_PB_pbsv_5959:HG2_PB_SVrefine2Falcon1plusDovetail_9608:HG2_PB_SVrefine2PBcRplusDovetail_8959:HG2_PB_SVrefine2Falcon2Bionano_2933;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_3584:HG4_PB_assemblyticsfalcon_21043;NumExactMatchSVs=2;ClusterMaxShiftDist=0.102564;ClusterMaxSizeDiff=0.102564;ClusterMaxEditDist=0.207487;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=454;DistBack=28;DistForward=34452;DistMin=28;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=261;REFWIDENED=5:78476191-78476451;PctSeqSimilarity=0.9281;PctSizeSimilarity=0.8648;PctRecOverlap=0.8667;SizeDiff=-71;StartDistance=3;EndDistance=3;GTMatch=1;TruScore=88;MatchId=4417.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:32:1/1:2:13:0:7:./.:0:0:0:0:0/0:9:0:0/1:8:8:.:.:.
chr5	80372213	HG2_PB_SVrefine2Falcon1plusDovetail_9613	T	TGGCAGGGAAGGAATAGTACATGGACACTTCTGTAGTTAGGAGGCAAGGACATCCGCTGATGGGGCAGATGGGAGGGAAGTGTCGGAGTTGGAGAAGAGAGAAAGAGGTGTGGAATAGTGATAACTAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9613:HG3_PB_pbsv_5762:HG2_PB_PB10Xdip_24387:HG2_PB_pbsv_5932:HG2_PB_SVrefine2PB10Xhap12_4291;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9613:HG2_PB_SVrefine2PB10Xhap12_4291;NumExactMatchSVs=2;ClusterMaxShiftDist=0.104478;ClusterMaxSizeDiff=0.104478;ClusterMaxEditDist=0.250923;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=127;DistBack=48037;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=388;REFWIDENED=5:80372214-80372601;PctSeqSimilarity=0.9937;PctSizeSimilarity=1;PctRecOverlap=0.7559;SizeDiff=0;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=91;MatchId=4419.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:46:0|1:28:8:4:27:./.:0:0:0:0:0/0:8:0:./.:.:.:.:.:.
chr5	84467281	HG3_PB_SVrefine2Falcon1Dovetail_3704	C	CAATTTCAAAGAGAAATTTCACACATTAATGGAGATCTCTTTTCAGCATTAGGAGGCATTAAATAAAATTTAAAAATAATAAAATATCCCTATATCATATATGATATCATATTTTATTATTTTTAAATTTTATTTAATGCCTCCTAATGCTGAAAAGAGATCTCCATTAATGTGTGA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_8269:HG2_PB_pbsv_5948:HG3_PB_HySA_9160:HG4_PB_pbsv_5982:HG2_PB_assemblyticsfalcon_21600:HG4_PB_assemblyticsfalcon_21085:HG3_PB_assemblyticsfalcon_21531:HG2_PB_assemblyticsPBcR_20866:HG2_PB_PB10Xdip_24410:HG2_PB_PB10Xdip_24409:HG3_PB_pbsv_5783:HG2_10X_SVrefine210Xhap12_4326:HG4_PB_SVrefine2PBcRDovetail_2963:HG4_PB_SVrefine2Falcon1Dovetail_3608:HG4_Ill_manta_1478:HG4_Ill_SVrefine2DISCOVARDovetail_4382:HG4_Ill_MetaSV_4194:HG4_Ill_GATKHCSBGrefine_4222:HG4_Ill_250bpfermikitraw_8335:HG3_PB_SVrefine2PBcRDovetail_2762:HG3_PB_SVrefine2Falcon1Dovetail_3704:HG3_Ill_manta_1395:HG3_Ill_Spiral_6495:HG3_Ill_SVrefine2DISCOVARDovetail_4444:HG3_Ill_MetaSV_4207:HG3_Ill_GATKHCSBGrefine_3982:HG2_PB_SVrefine2PBcRplusDovetail_8975:HG2_PB_SVrefine2PB10Xhap12_4306:HG2_PB_SVrefine2Falcon2Bionano_2948:HG2_PB_SVrefine2Falcon1plusDovetail_9624:HG2_Ill_manta_1698:HG2_Ill_SVrefine2DISCOVARplusDovetail_10427:HG2_Ill_MetaSV_4028:HG2_Ill_GATKHCSBGrefine_4136;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8269:HG4_PB_SVrefine2PBcRDovetail_2963:HG4_PB_SVrefine2Falcon1Dovetail_3608:HG4_Ill_manta_1478:HG4_Ill_SVrefine2DISCOVARDovetail_4382:HG4_Ill_MetaSV_4194:HG4_Ill_GATKHCSBGrefine_4222:HG4_Ill_250bpfermikitraw_8335:HG3_PB_SVrefine2PBcRDovetail_2762:HG3_PB_SVrefine2Falcon1Dovetail_3704:HG3_Ill_manta_1395:HG3_Ill_Spiral_6495:HG3_Ill_SVrefine2DISCOVARDovetail_4444:HG3_Ill_MetaSV_4207:HG3_Ill_GATKHCSBGrefine_3982:HG2_PB_SVrefine2PBcRplusDovetail_8975:HG2_PB_SVrefine2PB10Xhap12_4306:HG2_PB_SVrefine2Falcon2Bionano_2948:HG2_PB_SVrefine2Falcon1plusDovetail_9624:HG2_Ill_manta_1698:HG2_Ill_SVrefine2DISCOVARplusDovetail_10427:HG2_Ill_MetaSV_4028:HG2_Ill_GATKHCSBGrefine_4136;NumExactMatchSVs=23;ClusterMaxShiftDist=0.167131;ClusterMaxSizeDiff=0.128134;ClusterMaxEditDist=0.278552;PBcalls=18;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=176;DistBack=16812;DistForward=669;DistMin=669;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=5:84467282-84467287;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4420.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:75:./.:0:0:0:0:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr5	84489744	HG2_PB_SVrefine2PBcRplusDovetail_8976	A	ATATATGTATATACGCGTGTATATACATATATGTATGTGTATATACGCGTGTATATACATATATGTATGTGTATATACGCGTGTATATACATATATGTATGTGTATATACGCGTGTATATACATATATGTATGTGTATATACGCGTGTATATACATATATGTATGTGTATCTACGCGTGTATATACATATATG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10428:HG4_PB_SVrefine2Falcon1Dovetail_3609:HG4_PB_SVrefine2PBcRDovetail_2964:HG2_PB_assemblyticsfalcon_21601:HG2_PB_pbsv_5949:HG2_PB_PB10Xdip_24412:HG3_PB_pbsv_5784:HG2_PB_PB10Xdip_24411:HG2_PB_SVrefine2Falcon1plusDovetail_9625:HG2_Ill_250bpfermikitraw_8270:HG2_Ill_breakscan11_3585:HG4_Ill_SVrefine2DISCOVARDovetail_4383:HG3_Ill_SVrefine2DISCOVARDovetail_4445:HG2_PB_SVrefine2PBcRplusDovetail_8976:HG2_PB_SVrefine2PB10Xhap12_4307:HG2_PB_SVrefine2Falcon2Bionano_2949;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10428:HG4_Ill_SVrefine2DISCOVARDovetail_4383:HG3_Ill_SVrefine2DISCOVARDovetail_4445:HG2_PB_SVrefine2PBcRplusDovetail_8976:HG2_PB_SVrefine2PB10Xhap12_4307:HG2_PB_SVrefine2Falcon2Bionano_2949;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0895522;ClusterMaxSizeDiff=0.0895522;ClusterMaxEditDist=0.241814;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=192;DistBack=36;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=83;REFWIDENED=5:84489697-84489779;PctSeqSimilarity=0.9975;PctSizeSimilarity=1;PctRecOverlap=0.9793;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=4421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:./.:0:0:0:0:./.:0:0:0:0:1/1:0:20:./.:.:.:.:.:.
chr5	84509805	HG2_Ill_150bpfermikitraw_7753	G	GTATATATATATATCTATATCTATATATCTATATCTATCTATCTATCTATCTATATATATATATATATATATA	20	PASS	ClusterIDs=HG2_PB_HySA_11030:HG2_Ill_manta_1699:HG3_Ill_Spiral_6497:HG3_Ill_manta_1397:HG2_PB_pbsv_5950:HG2_PB_HySA_11031:HG3_PB_pbsv_5786:HG3_PB_HySA_9161:HG3_Ill_Krunchall_8268:HG2_Ill_GATKHC_9879:HG2_Ill_GATKHCSBGrefine_4137:HG2_Ill_150bpfermikitraw_7753:HG3_Ill_GATKHC_9856:HG3_Ill_GATKHCSBGrefine_3986:HG3_Ill_250bpfermikitraw_7982;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7753:HG2_Ill_GATKHCSBGrefine_4137:HG2_Ill_GATKHC_9879:HG3_Ill_Krunchall_8268;NumExactMatchSVs=4;ClusterMaxShiftDist=0.206897;ClusterMaxSizeDiff=0.206897;ClusterMaxEditDist=0.214765;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=1355;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=5:84509806-84509818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4422.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:38:0|1:32:3:1:34:./.:0:0:0:0:0/1:26:5:./.:.:.:.:.:.
chr5	84544389	HG2_PB_SVrefine2Falcon1plusDovetail_9626	A	ATGATATTGTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_11033:HG4_PB_pbsv_5984:HG2_PB_pbsv_5951:HG4_Ill_MetaSV_4195:HG4_PB_HySA_8831:HG2_PB_assemblyticsfalcon_21602:HG4_PB_SVrefine2Falcon1Dovetail_3610:HG2_PB_SVrefine2PBcRplusDovetail_8977:HG2_PB_SVrefine2PB10Xhap12_4309:HG3_PB_SVrefine2Falcon1Dovetail_3706:HG2_PB_SVrefine2Falcon1plusDovetail_9626:HG4_PB_SVrefine2PBcRDovetail_2965:HG2_PB_SVrefine2Falcon2Bionano_2950;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9626;NumExactMatchSVs=1;ClusterMaxShiftDist=0.109756;ClusterMaxSizeDiff=0.109756;ClusterMaxEditDist=0.177642;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=5:84544390-84544402;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9909;PctRecOverlap=0.9879;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4423.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:62:0|1:32:2:1:45:./.:0:0:0:0:0/1:18:5:0/1:8:38:.:.:.
chr5	85006275	HG3_Ill_Krunchall_8274	A	ATCGCGATCTCGGCTCACTGCACCCTCTGTCTCCCGGGTTCAAGCGATTCTCCTACC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4328:HG3_PB_pbsv_5788:HG3_PB_HySA_9165:HG4_PB_HySA_8835:HG4_PB_pbsv_5986:HG2_PB_PB10Xdip_24418:HG2_PB_pbsv_5952:HG2_PB_PB10Xdip_24417:HG2_PB_HySA_11037:HG4_PB_SVrefine2PBcRDovetail_2966:HG4_PB_SVrefine2Falcon1Dovetail_3611:HG4_Ill_scalpel_5729:HG4_Ill_manta_1481:HG4_Ill_SVrefine2DISCOVARDovetail_4385:HG4_Ill_Krunchall_8770:HG4_Ill_GATKHC_10014:HG4_Ill_GATKHCSBGrefine_4224:HG4_Ill_250bpfermikitraw_8342:HG3_PB_SVrefine2Falcon1Dovetail_3707:HG3_Ill_manta_1399:HG3_Ill_Krunchall_8274:HG3_Ill_GATKHC_9863:HG3_Ill_GATKHCSBGrefine_3988:HG3_Ill_250bpfermikitraw_7988:HG3_Ill_150bpfermikitraw_7809:HG2_PB_SVrefine2PBcRplusDovetail_8978:HG2_PB_SVrefine2PB10Xhap12_4310:HG2_PB_SVrefine2Falcon2Bionano_2951:HG2_PB_SVrefine2Falcon1plusDovetail_9627:HG2_Ill_manta_1700:HG2_Ill_SVrefine2DISCOVARplusDovetail_10433:HG2_Ill_Krunchall_8446:HG2_Ill_GATKHC_9886:HG2_Ill_GATKHCSBGrefine_4138:HG2_Ill_250bpfermikitraw_8277:HG2_Ill_150bpfermikitraw_7761;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4328:HG4_PB_SVrefine2PBcRDovetail_2966:HG4_PB_SVrefine2Falcon1Dovetail_3611:HG4_Ill_scalpel_5729:HG4_Ill_manta_1481:HG4_Ill_SVrefine2DISCOVARDovetail_4385:HG4_Ill_Krunchall_8770:HG4_Ill_GATKHC_10014:HG4_Ill_GATKHCSBGrefine_4224:HG4_Ill_250bpfermikitraw_8342:HG3_PB_SVrefine2Falcon1Dovetail_3707:HG3_Ill_manta_1399:HG3_Ill_Krunchall_8274:HG3_Ill_GATKHC_9863:HG3_Ill_GATKHCSBGrefine_3988:HG3_Ill_250bpfermikitraw_7988:HG3_Ill_150bpfermikitraw_7809:HG2_PB_SVrefine2PBcRplusDovetail_8978:HG2_PB_SVrefine2PB10Xhap12_4310:HG2_PB_SVrefine2Falcon2Bionano_2951:HG2_PB_SVrefine2Falcon1plusDovetail_9627:HG2_Ill_manta_1700:HG2_Ill_SVrefine2DISCOVARplusDovetail_10433:HG2_Ill_Krunchall_8446:HG2_Ill_GATKHC_9886:HG2_Ill_GATKHCSBGrefine_4138:HG2_Ill_250bpfermikitraw_8277:HG2_Ill_150bpfermikitraw_7761;NumExactMatchSVs=28;ClusterMaxShiftDist=0.118644;ClusterMaxSizeDiff=0.101695;ClusterMaxEditDist=0.311475;PBcalls=15;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=56;DistBack=58091;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=5:85006276-85006333;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4424.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:50:./.:3:5:0:1:./.:0:0:0:0:1/1:1:49:./.:.:.:.:.:.
chr5	85764949	HG3_Ill_SVrefine2DISCOVARDovetail_4453	T	TCATAAACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3586:HG2_PB_pbsv_5956:HG3_PB_pbsv_5795:HG3_PB_SVrefine2PBcRDovetail_2768:HG3_Ill_SVrefine2DISCOVARDovetail_4453:HG3_Ill_GATKHCSBGrefine_3997:HG2_Ill_MetaSV_4031:HG2_Ill_GATKHCSBGrefine_4146:HG3_PB_HySA_9170:HG2_PB_HySA_11046;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4146:HG2_Ill_MetaSV_4031:HG3_Ill_GATKHCSBGrefine_3997:HG3_Ill_SVrefine2DISCOVARDovetail_4453:HG3_PB_SVrefine2PBcRDovetail_2768;NumExactMatchSVs=5;ClusterMaxShiftDist=0.116071;ClusterMaxSizeDiff=0.107143;ClusterMaxEditDist=0.136364;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=114;DistBack=38401;DistForward=106315;DistMin=38401;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=5:85764950-85764960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4425.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:24:0|1:32:1:1:22:./.:0:0:0:0:0/1:18:7:./.:.:.:.:.:.
chr5	86372682	HG2_PB_SVrefine2Falcon1plusDovetail_9630	T	TAAAGAAAATATTTCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAGAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8981:HG2_PB_PB10Xdip_24438:HG2_PB_SVrefine2PBcRplusDovetail_8982:HG2_PB_assemblyticsfalcon_21627:HG2_PB_pbsv_5957:HG4_PB_HySA_8853:HG4_PB_pbsv_5992:HG3_PB_assemblyticsfalcon_21558:HG4_PB_assemblyticsfalcon_21108:HG2_PB_HySA_11057:HG2_PB_SVrefine2PB10Xhap12_4315:HG2_Ill_MetaSV_4032:HG2_PB_SVrefine2Falcon2Bionano_2954:HG2_PB_SVrefine2Falcon1plusDovetail_9630:HG4_PB_SVrefine2PBcRDovetail_2970:HG4_Ill_MetaSV_4199:HG4_PB_SVrefine2Falcon1Dovetail_3614:HG3_PB_SVrefine2Falcon1Dovetail_3710;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9630:HG2_PB_SVrefine2Falcon2Bionano_2954;NumExactMatchSVs=2;ClusterMaxShiftDist=0.28169;ClusterMaxSizeDiff=0.28169;ClusterMaxEditDist=0.309859;PBcalls=16;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=300;DistBack=10127;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=5:86372683-86372695;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9933;PctRecOverlap=0.9934;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4426.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:0|1:31:0:0:27:./.:0:0:0:0:0/1:30:11:0/1:6:14:.:.:.
chr5	88860555	HG2_Ill_SpiralSDKrefine_13740	C	CAAAATACAGCAGGAGGTGCTTCTTGTGAGATAATAATTAGAGCATGTTACTACAAACAACTTAAGCACACAAATAGACAAACTAAATTTTTAACTTTT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3588:HG2_PB_pbsv_5965:HG4_PB_pbsv_6000:HG2_PB_assemblyticsfalcon_21640:HG4_PB_assemblyticsfalcon_21121:HG2_PB_SVrefine2PBcRplusDovetail_8990:HG2_PB_PB10Xdip_24445:HG2_PB_PB10Xdip_24444:HG4_PB_SVrefine2PBcRDovetail_2978:HG4_Ill_svaba_7767:HG4_Ill_manta_1487:HG4_Ill_SVrefine2DISCOVARDovetail_4397:HG4_Ill_Krunchall_8810:HG4_Ill_GATKHCSBGrefine_4245:HG4_Ill_Cortex_2961:HG4_Ill_250bpfermikitraw_8379:HG4_Ill_150bpfermikitraw_8032:HG2_PB_SVrefine2Falcon2Bionano_2961:HG2_PB_SVrefine2Falcon1plusDovetail_9636:HG2_Ill_svaba_7648:HG2_Ill_manta_1708:HG2_Ill_SpiralSDKrefine_13740:HG2_Ill_SVrefine2DISCOVARplusDovetail_10453:HG2_Ill_Krunchall_8482:HG2_Ill_GATKHCSBGrefine_4152:HG2_Ill_Cortex_7156:HG2_Ill_250bpfermikitraw_8312:HG2_Ill_150bpfermikitraw_7792:HG2_10X_SVrefine210Xhap12_4343:HG2_PB_SVrefine2PB10Xhap12_4324:HG4_PB_SVrefine2Falcon1Dovetail_3620;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4343:HG2_Ill_150bpfermikitraw_7792:HG2_Ill_250bpfermikitraw_8312:HG2_Ill_Cortex_7156:HG2_Ill_GATKHCSBGrefine_4152:HG2_Ill_Krunchall_8482:HG2_Ill_SVrefine2DISCOVARplusDovetail_10453:HG2_Ill_SpiralSDKrefine_13740:HG2_Ill_manta_1708:HG2_Ill_svaba_7648:HG2_PB_SVrefine2Falcon1plusDovetail_9636:HG2_PB_SVrefine2Falcon2Bionano_2961:HG4_Ill_150bpfermikitraw_8032:HG4_Ill_250bpfermikitraw_8379:HG4_Ill_Cortex_2961:HG4_Ill_GATKHCSBGrefine_4245:HG4_Ill_Krunchall_8810:HG4_Ill_SVrefine2DISCOVARDovetail_4397:HG4_Ill_manta_1487:HG4_Ill_svaba_7767:HG4_PB_SVrefine2PBcRDovetail_2978;NumExactMatchSVs=21;ClusterMaxShiftDist=0.169312;ClusterMaxSizeDiff=0.168421;ClusterMaxEditDist=0.21164;PBcalls=12;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=98;DistBack=14893;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=5:88860556-88860559;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4427.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:41:0|1:26:4:2:32:./.:0:0:0:0:0/1:32:19:./.:.:.:.:.:.
chr5	89450768	HG2_PB_PB10Xdip_24446	T	GAAAGATGCTTACGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCAGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGAGGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACGGCAAGGCCAAGGGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCTGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGTCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCAGCAGGGGCACACTGACACCTCACACAGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCGATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAAGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAGTATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTCCATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGATGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACTCTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGTAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGTAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCACATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGACTGTGGTGGGGTTGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAAACTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAATAATAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_24446:HG3_PB_pbsv_5806:HG2_PB_pbsv_5967:HG4_PB_pbsv_6001:HG2_PB_HySA_11079:HG4_PB_assemblyticsfalcon_21122:HG2_PB_assemblyticsfalcon_21643:HG3_PB_HySA_9186:HG2_PB_HySA_11078:HG3_PB_SVrefine2Falcon1Dovetail_3718:HG2_PB_SVrefine2Falcon2Bionano_2963:HG4_PB_SVrefine2Falcon1Dovetail_3621:HG4_PB_SVrefine2PBcRDovetail_2979:HG2_PB_SVrefine2Falcon1plusDovetail_9638:HG2_PB_SVrefine2PB10Xhap12_4326:HG2_Ill_breakscan11_3589:HG2_PB_PB10Xdip_24447;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_24446;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0742216;ClusterMaxSizeDiff=0.0742216;ClusterMaxEditDist=0.182874;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=6077;DistBack=3688;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=5:89450769-89450781;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.998;PctRecOverlap=0.998;SizeDiff=-12;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:83:1/1:0:24:0:22:./.:0:0:0:0:./.:1:14:1/1:1:1143:.:6614:.
chr5	89891149	HG2_PB_SVrefine2PB10Xhap12_4328	CG	GGGGGCTGACCCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCTTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCAGGAGGGGCGGCCGGGCAGAGGCGCCCTCACTCCCGGACGGGGCGGCTGGCCGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9640:HG2_PB_pbsv_5969:HG2_PB_SVrefine2PB10Xhap12_4328:HG3_PB_pbsv_5808:HG2_PB_SVrefine2Falcon2Bionano_2965;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4328;NumExactMatchSVs=1;ClusterMaxShiftDist=0.057971;ClusterMaxSizeDiff=0.0463768;ClusterMaxEditDist=0.245714;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=167;DistBack=-101;DistForward=2;DistMin=-101;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=787;REFWIDENED=5:89890943-89891729;PctSeqSimilarity=0.9745;PctSizeSimilarity=0.9489;PctRecOverlap=0.9492;SizeDiff=-9;StartDistance=3;EndDistance=4;GTMatch=0;TruScore=95;MatchId=4429.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:33:0|1:23:2:1:26:./.:0:0:0:0:0/0:20:0:./.:.:.:.:.:.
chr5	91417211	HG2_PB_SVrefine2Falcon1plusDovetail_9643	T	TTATATGATTATATATCAAATCATATATGACATATAATCATACATATGATTATATATCAATCATATATGATTATATATGATTATGATTATATATGATATATATGATTATATATCATATATGATTATAATCATATATATGATTATATATCATATATGATTGATAATCATATATGATTATATATCATATATATGATATATATCATAATCATATATATGATTATATAATCATATATGATTGATAATCATATATATGATTGATATATCAATCATATATATGATTATATATCTCATATATGATTGATATATCAATCATATATATGATTATATAATCATATATATGATTGATATATAATCATA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3723:HG2_PB_pbsv_5972:HG4_PB_pbsv_6006:HG4_PB_HySA_8876:HG3_PB_pbsv_5813:HG2_Ill_GATKHCSBGrefine_4156:HG2_Ill_MetaSV_4039:HG2_Ill_manta_1710:HG3_Ill_MetaSV_4220:HG3_Ill_GATKHCSBGrefine_4007:HG4_Ill_MetaSV_4208:HG4_Ill_GATKHCSBGrefine_4249:HG2_PB_PB10Xdip_24451:HG2_PB_PB10Xdip_24450:HG4_PB_SVrefine2Falcon1Dovetail_3626:HG4_PB_SVrefine2PBcRDovetail_2983:HG2_PB_SVrefine2PB10Xhap12_4331:HG2_10X_SVrefine210Xhap12_4349:HG3_Ill_SVrefine2DISCOVARDovetail_4474:HG2_PB_SVrefine2Falcon2Bionano_2968:HG2_PB_SVrefine2Falcon1plusDovetail_9643:HG2_Ill_SVrefine2DISCOVARplusDovetail_10464:HG4_Ill_SVrefine2DISCOVARDovetail_4410;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10464:HG2_PB_SVrefine2Falcon1plusDovetail_9643:HG2_PB_SVrefine2Falcon2Bionano_2968:HG3_Ill_SVrefine2DISCOVARDovetail_4474;NumExactMatchSVs=4;ClusterMaxShiftDist=0.246617;ClusterMaxSizeDiff=0.243609;ClusterMaxEditDist=0.281392;PBcalls=12;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=356;DistBack=30789;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=67;REFWIDENED=5:91417212-91417278;PctSeqSimilarity=0.9875;PctSizeSimilarity=0.9972;PctRecOverlap=0.8824;SizeDiff=-1;StartDistance=-42;EndDistance=-42;GTMatch=0;TruScore=95;MatchId=4430.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:10:91:1/1:0:7:3:12:./.:0:0:0:0:1/1:0:26:./.:3:46:.:.:.
chr5	91699536	HG3_Ill_manta_1406	T	TTTAACAGACTCCTGAAGAAATGGGGGCCTAAATAGGAAATTTTAGATGGGGATTTTTGAAAGAAACGTGTCCTTCAAAAGGCTAGACAGAGAGA	20	PASS	ClusterIDs=HG4_PB_pbsv_6008:HG2_PB_pbsv_5974:HG3_PB_pbsv_5815:HG2_PB_assemblyticsfalcon_21656:HG4_PB_assemblyticsfalcon_21138:HG4_PB_SVrefine2PBcRDovetail_2986:HG4_Ill_svaba_7774:HG4_Ill_manta_1490:HG4_Ill_SVrefine2DISCOVARDovetail_4415:HG4_Ill_Krunchall_8821:HG4_Ill_GATKHC_10073:HG4_Ill_GATKHCSBGrefine_4251:HG4_Ill_Cortex_2962:HG4_Ill_250bpfermikitraw_8389:HG4_Ill_150bpfermikitraw_8042:HG3_PB_SVrefine2Falcon1Dovetail_3725:HG3_Ill_svaba_7746:HG3_Ill_manta_1406:HG3_Ill_Spiral_6536:HG3_Ill_SVrefine2DISCOVARDovetail_4478:HG3_Ill_Krunchall_8316:HG3_Ill_GATKHC_9909:HG3_Ill_GATKHCSBGrefine_4009:HG3_Ill_Cortex_2976:HG3_Ill_250bpfermikitraw_8024:HG3_Ill_150bpfermikitraw_7845:HG2_PB_SVrefine2PBcRplusDovetail_8995:HG2_PB_SVrefine2PB10Xhap12_4333:HG2_PB_SVrefine2Falcon2Bionano_2970:HG2_PB_SVrefine2Falcon1plusDovetail_9645:HG2_Ill_svaba_7659:HG2_Ill_manta_1711:HG2_Ill_SpiralSDKrefine_13755:HG2_Ill_SVrefine2DISCOVARplusDovetail_10469:HG2_Ill_Krunchall_8500:HG2_Ill_GATKHCSBGrefine_4159:HG2_Ill_Cortex_7163:HG2_Ill_250bpfermikitraw_8327:HG2_Ill_150bpfermikitraw_7807:HG2_10X_SVrefine210Xhap12_4352:HG4_PB_SVrefine2Falcon1Dovetail_3628:HG2_PB_PB10Xdip_24453:HG2_PB_PB10Xdip_24452:HG2_Ill_breakscan11_3590;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4352:HG2_Ill_150bpfermikitraw_7807:HG2_Ill_250bpfermikitraw_8327:HG2_Ill_Cortex_7163:HG2_Ill_GATKHCSBGrefine_4159:HG2_Ill_Krunchall_8500:HG2_Ill_SVrefine2DISCOVARplusDovetail_10469:HG2_Ill_SpiralSDKrefine_13755:HG2_Ill_manta_1711:HG2_Ill_svaba_7659:HG2_PB_SVrefine2Falcon1plusDovetail_9645:HG2_PB_SVrefine2Falcon2Bionano_2970:HG2_PB_SVrefine2PB10Xhap12_4333:HG2_PB_SVrefine2PBcRplusDovetail_8995:HG3_Ill_150bpfermikitraw_7845:HG3_Ill_250bpfermikitraw_8024:HG3_Ill_Cortex_2976:HG3_Ill_GATKHCSBGrefine_4009:HG3_Ill_GATKHC_9909:HG3_Ill_Krunchall_8316:HG3_Ill_SVrefine2DISCOVARDovetail_4478:HG3_Ill_Spiral_6536:HG3_Ill_manta_1406:HG3_Ill_svaba_7746:HG3_PB_SVrefine2Falcon1Dovetail_3725:HG4_Ill_150bpfermikitraw_8042:HG4_Ill_250bpfermikitraw_8389:HG4_Ill_Cortex_2962:HG4_Ill_GATKHCSBGrefine_4251:HG4_Ill_GATKHC_10073:HG4_Ill_Krunchall_8821:HG4_Ill_SVrefine2DISCOVARDovetail_4415:HG4_Ill_manta_1490:HG4_Ill_svaba_7774:HG4_PB_SVrefine2PBcRDovetail_2986;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0942408;ClusterMaxSizeDiff=0.0732984;ClusterMaxEditDist=0.22449;PBcalls=14;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=94;DistBack=0;DistForward=34428;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=5:91699537-91699538;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:80:1/1:0:26:3:40:./.:0:0:0:0:1/1:0:57:./.:.:.:.:.:.
chr5	94994209	HG2_PB_SVrefine2Falcon2Bionano_2974	T	TCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCATGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTTTTTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_pbsv_6012:HG4_PB_SVrefine2PBcRDovetail_2993:HG2_PB_SVrefine2PBcRplusDovetail_9000:HG2_PB_assemblyticsfalcon_21669:HG4_PB_assemblyticsfalcon_21152:HG4_Ill_MetaSV_4212:HG2_PB_SVrefine2Falcon2Bionano_2974:HG2_Ill_MetaSV_4043:HG2_PB_HySA_11113:HG4_PB_SVrefine2Falcon1Dovetail_3633:HG4_PB_HySA_8897:HG2_PB_SVrefine2Falcon1plusDovetail_9650:HG2_Ill_breakscan11_3591:HG2_PB_pbsv_5979;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_4043:HG2_PB_SVrefine2Falcon2Bionano_2974:HG4_Ill_MetaSV_4212;NumExactMatchSVs=3;ClusterMaxShiftDist=0.203554;ClusterMaxSizeDiff=0.203554;ClusterMaxEditDist=0.2816;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=326;DistBack=46795;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=5:94994210-94994220;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4433.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:0|1:27:0:0:29:./.:0:0:0:0:0/1:26:9:0/1:10:28:.:.:.
chr5	95394250	HG3_PB_HySA_9216	T	TATAAGAAAGCTGATTTTGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATAGCACCACTGCGCTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3732:HG3_PB_pbsv_5822:HG2_PB_pbsv_5982:HG3_PB_HySA_9216:HG2_Ill_breakscan11_3592:HG3_Ill_SVrefine2DISCOVARDovetail_4498:HG2_Ill_manta_1714;NumClusterSVs=7;ExactMatchIDs=HG3_PB_HySA_9216;NumExactMatchSVs=1;ClusterMaxShiftDist=0.121739;ClusterMaxSizeDiff=0.121739;ClusterMaxEditDist=0.190476;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=276;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:95394251-95394251;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9964;PctRecOverlap=0.9928;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4434.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:65:./.:16:20:13:5:./.:0:0:0:0:0/1:29:18:./.:.:.:.:.:.
chr5	95703006	HG3_Ill_SVrefine2DISCOVARDovetail_4500	T	TCTCAGATCTCAAACTCTGTGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGA	20	PASS	ClusterIDs=HG2_PB_HySA_11118:HG2_PB_pbsv_5983:HG3_PB_HySA_9219:HG2_PB_PB10Xdip_24457:HG2_PB_SVrefine2PB10Xhap12_4340:HG3_Ill_svaba_7760:HG3_PB_pbsv_5823:HG3_Ill_scalpel_5963:HG3_Ill_manta_1407:HG3_Ill_SVrefine2DISCOVARDovetail_4500:HG3_Ill_Krunchall_8328:HG3_Ill_GATKHC_9924:HG3_Ill_GATKHCSBGrefine_4013:HG3_Ill_250bpfermikitraw_8038:HG3_Ill_150bpfermikitraw_7861:HG2_PB_SVrefine2Falcon1plusDovetail_9652:HG2_Ill_svaba_7677:HG2_Ill_SVrefine2DISCOVARplusDovetail_10484:HG2_Ill_Krunchall_8517:HG2_Ill_GATKHC_9958:HG2_Ill_GATKHCSBGrefine_4165:HG2_Ill_250bpfermikitraw_8348:HG2_Ill_150bpfermikitraw_7824:HG2_10X_SVrefine210Xhap12_4367;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4367:HG2_Ill_150bpfermikitraw_7824:HG2_Ill_250bpfermikitraw_8348:HG2_Ill_GATKHCSBGrefine_4165:HG2_Ill_GATKHC_9958:HG2_Ill_Krunchall_8517:HG2_Ill_SVrefine2DISCOVARplusDovetail_10484:HG2_Ill_svaba_7677:HG2_PB_SVrefine2Falcon1plusDovetail_9652:HG3_Ill_150bpfermikitraw_7861:HG3_Ill_250bpfermikitraw_8038:HG3_Ill_GATKHCSBGrefine_4013:HG3_Ill_GATKHC_9924:HG3_Ill_Krunchall_8328:HG3_Ill_SVrefine2DISCOVARDovetail_4500:HG3_Ill_manta_1407:HG3_Ill_scalpel_5963:HG3_Ill_svaba_7760;NumExactMatchSVs=18;ClusterMaxShiftDist=0.20339;ClusterMaxSizeDiff=0.184874;ClusterMaxEditDist=0.285714;PBcalls=7;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=61;DistBack=-61;DistForward=33;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=62;REFWIDENED=5:95703007-95703068;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4435.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:30:0|1:19:3:3:22:./.:0:0:0:0:0/1:24:21:./.:.:.:.:.:.
chr5	96232568	HG3_Ill_Krunchall_8334	G	GTAAGTCATATGTTGGGTAACGATAGACTGTTATTTAATCTAGAAAGTAACAGAATAATTGTGAATGTTTATAAATAGCTATATATTGTCAGTCAACCATA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4372:HG2_PB_pbsv_5987:HG3_PB_pbsv_5827:HG4_PB_assemblyticsfalcon_21162:HG2_PB_assemblyticsfalcon_21684:HG3_PB_HySA_9226:HG2_PB_HySA_11121:HG4_PB_SVrefine2Falcon1Dovetail_3638:HG3_PB_SVrefine2Falcon1Dovetail_3736:HG3_Ill_SVrefine2DISCOVARDovetail_4506:HG3_Ill_Krunchall_8334:HG3_Ill_GATKHC_9930:HG3_Ill_GATKHCSBGrefine_4017:HG3_Ill_250bpfermikitraw_8044:HG3_Ill_150bpfermikitraw_7868:HG2_PB_SVrefine2Falcon2Bionano_2979:HG2_PB_SVrefine2Falcon1plusDovetail_9656:HG2_Ill_SVrefine2DISCOVARplusDovetail_10488:HG2_Ill_Krunchall_8523:HG2_Ill_GATKHCSBGrefine_4169:HG2_Ill_250bpfermikitraw_8355;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8355:HG2_Ill_GATKHCSBGrefine_4169:HG2_Ill_Krunchall_8523:HG2_Ill_SVrefine2DISCOVARplusDovetail_10488:HG2_PB_SVrefine2Falcon1plusDovetail_9656:HG2_PB_SVrefine2Falcon2Bionano_2979:HG3_Ill_150bpfermikitraw_7868:HG3_Ill_250bpfermikitraw_8044:HG3_Ill_GATKHCSBGrefine_4017:HG3_Ill_GATKHC_9930:HG3_Ill_Krunchall_8334:HG3_Ill_SVrefine2DISCOVARDovetail_4506:HG3_PB_SVrefine2Falcon1Dovetail_3736:HG4_PB_SVrefine2Falcon1Dovetail_3638;NumExactMatchSVs=14;ClusterMaxShiftDist=0.104265;ClusterMaxSizeDiff=0.104265;ClusterMaxEditDist=0.219178;PBcalls=10;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=100;DistBack=317;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=101;REFWIDENED=5:96232569-96232669;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:45:0|1:30:4:2:40:./.:0:0:0:0:0/1:19:18:./.:.:.:.:.:.
chr5	96568150	HG4_PB_SVrefine2PBcRDovetail_2998	T	TGAGCTTGGAAGTAGACCCCAAGCTCTCAGTGGTAATGTAGCCCAGACAACACATTCATTTTAGCTTTGTGACACCCAAAGTAGAGGGCTCAGTTAAGCCATACTGGTGGTAATGAATGTGAAAAAAGCTAAAATGAATGTGTTGTCTGGGCTACATTACCACTGA	20	PASS	ClusterIDs=HG2_Ill_manta_1717:HG3_PB_pbsv_5830:HG2_PB_HySA_11127:HG2_PB_pbsv_5990:HG4_PB_pbsv_6019:HG4_PB_HySA_8906:HG2_PB_PB10Xdip_24462:HG4_PB_assemblyticsfalcon_21167:HG2_PB_assemblyticsfalcon_21689:HG4_Ill_SVrefine2DISCOVARDovetail_4433:HG2_Ill_SVrefine2DISCOVARplusDovetail_10493:HG4_PB_SVrefine2Falcon1Dovetail_3640:HG4_Ill_MetaSV_4217:HG3_Ill_Spiral_6551:HG3_Ill_MetaSV_4229:HG2_Ill_MetaSV_4049:HG2_PB_SVrefine2PB10Xhap12_4344:HG2_PB_SVrefine2Falcon1plusDovetail_9659:HG2_PB_SVrefine2PBcRplusDovetail_9006:HG2_10X_SVrefine210Xhap12_4375:HG4_PB_SVrefine2PBcRDovetail_2998:HG3_PB_SVrefine2Falcon1Dovetail_3738:HG3_Ill_manta_1410:HG3_Ill_SVrefine2DISCOVARDovetail_4509:HG3_Ill_GATKHCSBGrefine_4022:HG2_PB_SVrefine2Falcon2Bionano_2983;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_manta_1717:HG4_PB_SVrefine2PBcRDovetail_2998:HG3_PB_SVrefine2Falcon1Dovetail_3738:HG3_Ill_manta_1410:HG3_Ill_SVrefine2DISCOVARDovetail_4509:HG3_Ill_GATKHCSBGrefine_4022:HG2_PB_SVrefine2Falcon2Bionano_2983;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0535714;ClusterMaxSizeDiff=0.047619;ClusterMaxEditDist=0.189349;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=165;DistBack=522;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=5:96568151-96568158;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4437.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:75:1/1:1:35:1:31:./.:0:0:0:0:./.:2:26:./.:.:.:.:.:.
chr5	98972994	HG2_PB_HySA_11149	T	TAAAAATAAGTGAGATTTACGGGGTGCTCACGCTGTATCCAGCACTTTGGAGCGAGCGCGATCACGAGGTCAGGAGATCGAGACCATCCGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGGCGTGTGGCGGGCCTGTATCCAGCTACTTGGAGGCTGAGGCAGGAATGGCGTGAACCGGGAGCGAGTTGCAGTGAGCGAGATGCCACTGCACTCAGCCTGGCGACAGAGCGACACTCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3743:HG2_PB_assemblyticsfalcon_21706:HG3_PB_assemblyticsfalcon_21637:HG2_PB_pbsv_5999:HG2_PB_SVrefine2Falcon1plusDovetail_9664:HG2_PB_HySA_11149:HG2_Ill_breakscan11_3594;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_11149;NumExactMatchSVs=1;ClusterMaxShiftDist=0.192371;ClusterMaxSizeDiff=0.189055;ClusterMaxEditDist=0.228856;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=272;DistBack=-1;DistForward=8;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=5:98972995-98973011;PctSeqSimilarity=0.9205;PctSizeSimilarity=0.858;PctRecOverlap=0.8612;SizeDiff=-45;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=87;MatchId=4439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:36:./.:29:19:16:6:./.:0:0:0:0:./.:21:2:./.:.:.:.:.:.
chr5	99200013	HG2_PB_PB10Xdip_24490	A	GATTTTCACCAATGTTATAAATTGATAATTTAACAAAAATAGTTTTTTGAGTAGGTGTATAGAAGAATTAAATTCTGGTTTTAATAGTAAACCTCTAATAAAGACCATGTAGTAGGACTCAACTACCTAATTTTTAATTTTAGTATAAAACTAGAGTAATAATAATAAAGCAGTATTGTACGGTTAGATAAACATCAATAGATTAGAACAGAGCATCTAAAATTAAACTCTCACGTATATAGACAGTTTTCTTTTTTTTGAAGGAGAAGAAGACAGATTTGTTATTTATTTCTTTATTTCTTTATTTTTTAATTATACTTTAAGTTCTAGGGTACATGTGCACAACTGCAGGTTTGTTACATATGTATACATGTGCCGCATTGGTTTGCTGCATCCCTTAACTCGTCATTTACATTAGGTATTTCTCCTAATGCTATCCCTCCCTCATCCCCCCACCCCATGACAGGCCCCGGTGTGTGATGTTCCCCGCCTGTGTCCAAGTGTTCTCATTGTTCAATTCCCGCCTATTAGTGAGAATATGTGGTGTTTGGTTTTCTGTCCTTGCAATAGTTTGCTCAGAATGATGGTTTCCAGCTTCATCCATGTCCCCACAGAGGACATGAACTCATCCGTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATTCATTCTATCATTGATGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTCTCTTTATAGTAGCATGACTTATAATCCTTTGGGTTTAATCCCAGTAATGAGATTGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCTTGAGGAATAGCCACACTGTCTTTCACAATGGTTGAACTAGTTTACACTCCCACCAACAGTGTAAAAGCATTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTGTCTCATTGTGGTTTTGATTCGCATTTCTCTGATGACCAGTGATGATAAGCATTTTTTCATGTGTCTGTTGGCTGCACAAATGTCTTATTTTGAAAAGTGTCTGTTCATATCCTTTGCCCACTTTTTGATGAGATTGTTTGATTTTTTCTTGTAAATTTGTTTAAGTTCTTTGTAGATTCTGGATATTAGCGCTTTGGCAGATGGGTAGATTGCAAAAATTTTCTCTCATTCTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTCCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTTGCCATTGCTTTTGGGATTTCAGTCATGAAGTCTTTGTTCATGCCAATGCCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACATTTAAGTCTGTAATCAATGTTGAATTATTTTTTGTATAAGGTGTAAGGAAGGGATCCATTTTCAGCTTTCTACATATGACTAGCCAGTTTTCCCAGCACCATTATTAAATAGGGAATCCTTTCCCTATTTCTTGTTTTTGTCAGATTTGTCAAAGATCTGATGGTTGCAGATGTGTGGTGTTATTTCTGAGGCCTCTGTTCTGTTCTATTGGCCTATATCTCTGTTTTGGAACCAGGAAATGAACAACCAGTACCAGCCACTGCAAAAACATGCCAGATTGTGAATACCATCGATGCTAAGAAGAAACTGCATCAACTAACGGGCAAAAAAAAAACAGCTAACACCATAATGACAGGATCAATTTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCCCCTGTTAAAAGACACAGACTGGCAAATTGGATAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAGACCTATCTCATGTGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGCTCTACCAAGCAACTGCAAAGCAAAAAAAAAAGCAGGGGTTGCAATCATAGTCTCTAATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAAGCCATTACATAATGGTAAAGGGATCAGTTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAACACAGGAGCATCCAGATTCATAAAACAAGTCCTGAGAGACTTAAAAGAGACTTAGACTCCCAGACAATAGTAATGGGAGACTTTAGCACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAGGTTAACAAGGACATCCAGGACTTGAACTCAGCTCTGCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAAAAGAATATACATTCTTCTCAGCACCACATTGCCCTTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTTAAAGAACAGAAATCATAACAAACTGTCTCTCAGACCACAGTGCAATCCAATTAGAAGTCAGGATTAAGAAACTCACTCAAAACCACACAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTAAATAACGAAATGAAGGCAGAAATAAAGATGTTCTTCGAAACCAATGAGAACAAAGCCACAATGTACCAGAATCTCTAGGACACATTTAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAGGAAAAAGCAGGAAAGATCTAAAATAGACACCCTAACATCACAATTGAAAGAACTAGAGAAGCAAGAGCAAACAAATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAGATAGAGACACACACACAAAAAAAACCCTTCAAAAAATCAATGACTCCTGGAGCTGGTTTTTTGAAAAGATCAACAAAATTGATAGACTGCTAGCAAGACTAATAAAGCAGAAAAGAGAGAAGAATCAAATAGATGCAATAAAAATGATAAAGGGGATGTCACTACTGATCCCACAGAACTAGAAACAACCATTGGAGAATACTATAAATACCTCTACGCAAATAAACTAGAAAATCTAGAATAAATTACTAAATTCCTGGACACATACACCCTCCCAAGACTAAGCCAGGAAGAAGTGGAATCTCTAAATAAACCAATAACAGGCTCTGAAATTGAGGCAATAATTAATAGCCTACCAACCAAAACAAGTCCAGGACCAGATGGATTCACACCTGAATTCTACCAGAGGTACAAAGAGGAGCTGGTATCATTCTTTCTGAAACTATTCCAATCGATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACACACACAAAAAAGAGAATTTTAGACCAATTACCCTGATGAACATCGATGTGAAAATCCTCAGTAAAATACTGGCAAACTGAATCCAGCAGCACATCAAAAAGCTTATCCACCAAGATCAAGTTGGCTTTATCCCTGGGATGCAAGTCTGGTTCAACATACGCAAATCAATAAATGTAATACATCACATAAACAGAACCAAAGACAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACGCTTCATGCTAAAAACTCTCAATAAACTAAGTATTTATGGAATGTATCTCAAAATAATAAGAGCTATTTATGACAGACCGACAGCCAGTATCATACTGAATGGGCAAAAACTGGAAGCATTCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACTACTCCTATTCAACATAGTGTTGGAAGTTCGGGCCAGGGCAATCAGCCAGGGGAAAGAAATGAAGCGTATTCAATTAGGAAAAGGGGAAGTCAAATTGCCCCTGTCTGCAGGTGACATGACTGTATATTTAGAAAACTCAGCCCAAAATTTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAGACAAATGGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCTAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAACAAAAGAAGACACAACAAATGGAAGAACATTCCATGCTCATGGATAGGAATAATCAATATCGTGAAAATGGCCATACTGCCTAAGGGAATTTATAGATTCAATGCCATGCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAGCTACTTTAAAGTTCATATGGAACCAAAGAAGAGCCCGCATTGCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCATGCTACCTGACTTCAAACTATACCACAAGGCTACAATAACCAAAAATACATAGACAATTTTCAAAGAATACGTAAATGAAACACAATGCAGGAAACATCATCTATTCAACACATAATGCTGAAATATTTGAGCATGCATATGCAAACAAATGAACCTTCACTACTACATCAGTTTATATAAAACATTAACTCAAGATAGATCATAGACTACAATGTAAGAACTAAATTTAAAATATTTTAGAGGAAACATAAAAAAAAATTTGTGACCTTGACTTAAGCAAAGCTTTCTAAGACACATTGCAGAAATTATAAATTTAAGTTGTATTTGAATGACACTGGTAAGAAGATTAAAATATAGGAGACACACTGAGAGAACATATTTGCAGAACACAATAGACAATGAGCTTGACTTCAAAATACATAGAAGTTTCTTTCAATTCAATAACAAAATGATAACCAAATATAAAAAATAGGAACTTTTTAGGTCTAAAAATGAACAAAAACTTCAATAAGGTGTATATAGGCATGGTAAATAAGCCCATGAAAAAATGCTCAACATTAAAGAGTTATAAAGGAAATAAAAATTTGACCATAATGGATACACAATATGCCTGCTAAATTGGCTTGAATTAGAAAGACTGACACTACCAAGTGCTTGAGAAGGGAAACTGGGACTTTCAAGTAACAGAGGGGGTAAGCAAATAGATGGTCAAATGCAAAATTGTTTAGCAATTCTGGAAAATAGTTTGATAGGTTTTTAATGAACTCAAACATACACTTACTGTAAGACTCAGTAATCTCAGAGCTAGGAATTTACCTAAGAGAAATGAGAGTAAATATCCATACAAAGACCTGTAGGCAAATGCATACAGGGGCTATAATAATAACACTCCCATCCAACAAAGAAACAAATTTCATCAACTACGATTAAATAAACAAATGTTGATACACTTACACAGCAATAAAAAGAAGCCGACTATACTACTGTTACTTTCATCTACAAATACTATATGAAAGAAAAGTGACTAACAGCCCTCATAATTCTGCTCATATTGCCTTCTGGAATAGAGCATTGTAATAAAGAAAACAGATCAATGCTTACGCAGGGATGAACAGGTGAAGCGTTGAGTGGAACAGAACATGAGAGAACTGTTTGGAGTAAAGGAAACTTTCTATATGTTGATTGAAGTAGGGATTACACAACTGTATACATTTATTAAAATCCTGAAAGTATACACTTAAAATGATTTTGTTATACATAAGTTAACTCCAGTAAACCTAACTTTGAAAAAATTTGACTTTCAATTTTTGTAATTTTTTTCTACTCTTGCTTCACTTTTTCACCTAGGGTGTAACCCTGCAGACATCTCTACTGAACGCTTTAGGGTTTGCCAGGGCCTTTCTCTGTTGGTTAATTCCCCTCAGCAATGAAACTGATGAAGTTTTTCTATAAACTTAGGATGTCGCACTCAAATCAGTGTGTTCCCCTTATCTCTAGGACCAAGGTCCCTCTTCAGCTTGCCTCTACTTTCAAACAAATGATTTTATAAAATATTTTAGCTCTTATTGTTACTCTTTTATAAATGTTGATCTAATACAAGATAATTCAATGTGGCTGTAAGCAAAAAGCCTTTAGTCTGTCTAGAGGGCTATTTTGAAATTATAATATATACTGGGAAAGCCTAGCGGCATATTAAGTAACCTGTGTATAAATGAGGACTTCACAATGCTTTGTACAGAATAACATATGTGAAGATATCCAAGAAAGTTAAAATTCTCTATGCTAAACTAACATGAGATGTATCATATTTTGAACTGATCTAAATAAGTCCAGGGAATTCTCTATGGTGGAACCGATCAGCTTGCCTAGTATCTCTCACATTCGTTCAAGGGTAGAAATTGATCATTATGAGATTACCCCATGTTGCTGACAAACAATCAGAGGATTATAATAATAAACAGTAGGATCATATCCAACTCATATCCTTTACAAAATACTTATGTTTGGGATTAATGGGGGTCTTACATTTAACATTCATTGTTGAAGATAACTTGATAATTTCACTGTTTTCTGTGTCAGAGATCCCAAGATTATAAAAGTTATTCTACTCTAATGAAGCAGTTGGAGAAAGGAAGACAAAGTACACCACATTTTTTTTATTTTGTCAATGCTCCATCTTTAAGTACTTTGATGGCAAGTAGCTTAATTTGCTTCTTATGACACAATAAGTTTTAGATTGTTTTGTTTGTTTTAATTAGTGTCAGTGGGGTATTAAGAGCCTAATTTGGCTCCTCATTTCATCTATTCCACTTTCTTTTTCATCTACTTCTGATTATGCATGTATGTTACATCTTTTGAAATCATCTCACAGTGTTTGAAGGTTATATTCTTCTAGAGAAAATATTTTTTGTCTTTCTGCATTTCAGTTTGGGAATTTTTCAGTGACCTATCTTCTGGCTCACGGTTCTTTCCTCAACCATGTTCAGTCTATTGCTAAGCCCATCACCAGTGTTCTTCATTTATGTTGCAGTGTTTAAAACATGGAACATTTTTTTTCAATCCTTTCTTACATTGGATTCTCTGGTTTTTTTACTCATCTGTTTTTGCATGTTGTCCACCTTTTCTTAGAGTCATAAACATATTAATCATGCATTTTTTAAAATTATTTGTCTAACAATTCCAAAATCTGTATTGCTTCGAAGTCTAGTTCTGATGTTAGCATCTTTTTTTGTTTGTTTGTTTGTTTGTTTTTGAGATGGAGTCTTGCTCGTGTCGCCCAGGCTGGAGTGCAATGCCGCATCTTGGCTCACTGCAAGCTCTGCCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTTCCCCCCACCACGCCTGGCTAATTTTTTGTTTGTTTGTTTTTTGTATTTTCAGTAGAAACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTACTGACTTTGTGATCTGCCAGCCTCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9667:HG2_PB_pbsv_6003:HG2_PB_PB10Xdip_24490:HG2_PB_PB10Xdip_24489:HG2_Ill_breakscan11_3595:HG2_PB_HySA_11153:HG3_PB_SVrefine2Falcon1Dovetail_3744:HG2_10X_SVrefine210Xhap12_4384:HG2_Ill_SVrefine2DISCOVARplusDovetail_10506:HG4_Ill_SVrefine2DISCOVARDovetail_4445:HG2_PB_SVrefine2PB10Xhap12_4359:HG2_PB_SVrefine2PBcRplusDovetail_9016;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_24490;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00907798;ClusterMaxSizeDiff=0.00311505;ClusterMaxEditDist=0.119775;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=7379;DistBack=2364;DistForward=5721;DistMin=2364;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:99200014-99200012;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9988;PctRecOverlap=0.9986;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4440.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:146:1/1:2:45:0:21:./.:0:0:0:0:1/1:0:63:1/1:0:612:.:7329:.
chr5	99299920	HG4_PB_pbsv_6032	C	CTTTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACGGAAGTCTCGCTACGTCGCCCAGGGCTGGAGTGCGGTGGCGGGATCTCGTCATCTGCAAGCCTCCGCTCGCCGGGTTAGCCATTCTCCTGCTAGCCTCCCAAGTAGCTGGGACTTTAAGGCGCCCGCCACTAACCGGCTAAATTTTTTGTATTTTTAGATAGAGACGGGGTTCACCGTTTTAAGCCGGGATGGTCTCGATCTCCTGACCTGTGATCCGCCCGGCCTTCGGCCTCCGCAAAGTGCTGGATTACACGGCGTGAGCCACCGCGCCCCACGAGGCCGGATTTTTTTTT	20	PASS	ClusterIDs=HG3_PB_HySA_9256:HG2_PB_SVrefine2Falcon1plusDovetail_9669:HG2_PB_pbsv_6005:HG3_PB_assemblyticsfalcon_21641:HG4_PB_pbsv_6032:HG2_PB_PB10Xdip_24492:HG2_PB_assemblyticsfalcon_21711:HG4_PB_HySA_8940:HG3_PB_pbsv_5842:HG4_PB_SVrefine2PBcRDovetail_3006:HG2_PB_SVrefine2PB10Xhap12_4362:HG2_Ill_breakscan11_3596;NumClusterSVs=12;ExactMatchIDs=HG4_PB_pbsv_6032;NumExactMatchSVs=1;ClusterMaxShiftDist=0.259016;ClusterMaxSizeDiff=0.255738;ClusterMaxEditDist=0.327869;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=333;DistBack=3;DistForward=4450;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=5:99299906-99299923;PctSeqSimilarity=0.9301;PctSizeSimilarity=0.967;PctRecOverlap=0.9399;SizeDiff=11;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=94;MatchId=4441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:38:0|1:38:1:0:27:./.:0:0:0:0:0/1:41:5:0/1:11:10:.:.:.
chr5	99304371	HG4_Ill_GATKHCSBGrefine_4271	G	GAAAAAAAATTCTCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3597:HG3_PB_pbsv_5843:HG4_PB_pbsv_6033:HG3_PB_assemblyticsfalcon_21642:HG2_PB_assemblyticsfalcon_21712:HG2_PB_pbsv_6006:HG4_Ill_MetaSV_4225:HG4_Ill_GATKHCSBGrefine_4271:HG3_Ill_GATKHCSBGrefine_4033:HG2_Ill_GATKHCSBGrefine_4190:HG3_PB_SVrefine2Falcon1Dovetail_3746:HG2_PB_SVrefine2Falcon1plusDovetail_9670:HG2_PB_HySA_11155;NumClusterSVs=13;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_4271:HG4_Ill_MetaSV_4225;NumExactMatchSVs=2;ClusterMaxShiftDist=0.1527;ClusterMaxSizeDiff=0.1527;ClusterMaxEditDist=0.206628;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=281;DistBack=4450;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=5:99304372-99304383;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9964;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:40:0|1:40:0:0:25:./.:0:0:0:0:0/1:32:14:./.:.:.:.:.:.
chr5	99317517	HG3_PB_SVrefine2Falcon1Dovetail_3747	CTACC	TACTTGGGAGGTGAAGCAGGAGAATCACTTGAACCCGGATGCGGAGGTTGCAGTGAGCCGAGATTGCACCACTGCACACCAATCTAGGTGACAGAGTGAGAATCCATATAAAATAATAATAATGAAATAAATAAATAAAAATAAAAAACTGTGACTGTCGCTTTATTTGTACTCAGATTTATGTCTGCCAACTAGATTTAGTGATAAAATAGTTAAAATTATATTTACATGTGTCCATAATTTTTTAAATTGGGATTATCTTGTCTTCTTTATAAAATATCTAATCTTGTTTATGTTTTCAGATAGAACCATCATGCATATTCTTATTTGAATACTAGAGACATTAAATATCAGCAAGTCACCATGTTCCATCCTCTCCCACTATACACAAAAGTTTGGGATGATCTTGAAAAAGTTTGTTTGTATTTGGGAAATACAATGGTCTTTAACAAAAAGACACCAAAAAGAAACTCTTGGAAGAACTATTTTAGCCAATTTGTAGCTAGAATATTGTAGCAATACAATGCGGAAAATGCTATAACTACAATGTAGATATGCCAAGTAATAAACATTTTTCCCCACAGCTCCTACTCATTAACTTTAGATACTGCATGCTTCAATTTTGAAGCCTCTAAGAGGTTTTTGTGTGTGTGTTTCTTTTTCTTCTCATTCTAATACATAATGGAAACAGTTGTGTCTTTTCTGGGTTTTCAGGCTTTAAGAGATTTTATAATATGTTTTCTTTTCTACTAAAAGTTGTTTTTCTCTAAATGACTTTGATTTCTTCTAATAGTAAAAGAATGGCTGTGTTTCTATTATATATTTTACAATCTTATTACTGGAAAATAAATAAACTGCATTTTTTAAAACTTGGAAACATTTTTAGAATTGCATATCTCTTGTTGTTCTTTACTTGGTATTTTGTCTACCAAAAGATAGCAGATAATTCAATCAACTCATAGTTTTTTCTAATCTGCAAATATTTGCTTATTCTGCAAATAATTTTTGGTTTTTGTATATTTTGTTAAATTGAGAAGAATAAATTGTATGTATATATACTACAGTTATATTAGAACTGTATGTTGACCACATTAAATGGCTCTTTTTTCAAACTATGAGAAATTATATCAAATAAATTTCCTGAGCATTTGAATGTACTAGATCTCAGATTACATGCTGCGAGAATTGAGACAAATTTCTAACCTGAAGGTGCTTAAAAGAGCTGACTCAGAGTTTAAGTATCAAAACATTTAAAAGAGTGCTGGGCACGGTGGCTCACACCTATAATCCTAGCACTTTGGGAGGCCAAGGTGGGCAGGTCACTTGAGGTTGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAAAGCCTGTCTCTACTAAAAATACAAAATTAGCCAGGAGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGCGGTTGAGGCAAGAAAATTGCTTGAACTCAGGAGGCAGAAGGCAGAGGTTGCAGTCAACTGGGATTGCGCCATTGCACTCTAGCCTAGGCAATAAGAGCGAAATTTCCTCTCAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAGAAAAGAAAGAAAAAGTTTAAAAGAAAATAATTTAACATAATCAAAAATTTTTGTAAGATATTCATATTTTAATAAATTATTATTATTTTTTGGTTTATGGTGTAAAGCAAAACTCTCTGAGACAGGTCTCAACCAATTTAGAAAATTTATTTTGCCAAGGTTAGGGACATGGCTGTGAGAGCCTCAGGAGTTCCTGACCCCATCTGCCTGACCAAGTTGGCTAGGTTACAGCTTGATGTTAAACATTTTAGGGAGATATGAGACATCAATCAATACATGTAAGATATACATTGGTTTGGTCCAGAAAAGTGGAACAACTCAAAGCAGGGGCCTTCAGATCATAGGTAGATTTAAAGATTTTCTGATTGGCAACTGGTTGAAAGGGTTATTATCTAAATAAGGGAATGTCTGGGTTATGATAAGGGTTGTGAAGACCAAGGTTTTATCATGTAGATGAAGCCTTCAGGTAGAAGGCTTCAGAGATAATAGACTATAAATGTTTCTTATCCGACTTAAAGAGCCTGTTCTATCAGTACTTCCAACAGGGAGGAGAGAATAATGAGGCATGTCCAGCTCCCCCTTCCCATCATGGCCTGAGCTACTTTTTCAGGTTAACTTTGGAATGTCCTTGCTGGAGAGGAGGGTCCATTCAGATGGTTGAGGGGCTTAGAATTTTTATTTTTGTTTACAATAGCAATACTTCAAAAGTCGCTAAGCAAAAAAGATTTAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3747:HG4_PB_HySA_8941:HG4_PB_pbsv_6034:HG4_PB_SVrefine2PBcRDovetail_3007:HG2_PB_SVrefine2PBcRplusDovetail_9018:HG2_10X_SVrefine210Xhap12_4386:HG3_Ill_SVrefine2DISCOVARDovetail_4519:HG2_PB_assemblyticsfalcon_21713:HG2_PB_SVrefine2Falcon1plusDovetail_9671:HG2_PB_SVrefine2PB10Xhap12_4363:HG3_PB_SVrefine2PBcRDovetail_2777:HG2_Ill_breakscan11_3598:HG3_PB_pbsv_5844:HG2_PB_pbsv_6007:HG2_PB_HySA_11156:HG2_PB_PB10Xdip_24493:HG3_PB_assemblyticsfalcon_21643;NumClusterSVs=17;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_3747:HG3_PB_assemblyticsfalcon_21643;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0455416;ClusterMaxSizeDiff=0.0386658;ClusterMaxEditDist=0.194898;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=2305;DistBack=13132;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:99317522-99317516;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.9948;PctRecOverlap=0.9965;SizeDiff=-12;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4443.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:61:0|1:31:9:3:29:./.:0:0:0:0:0/1:30:13:0/1:93:143:.:2433:.
chr5	99623221	HG4_PB_pbsv_6036	A	ATAAAATTGCACATCCATAACATCCACAATTAAAAGAACTAGAGAAAGCAGAGCAAAAAACACACATTCACAATCTAGCAGAAAGGCAAGAATAACTAAGATCAGCAGCAGAACTGAAGGAAATTAAGACAAAAAAAAACCCTTTAAACAAAATCAATGGAATCAGGAGCTGGTTTTTGAAAAAGATCAACAAAAATTGATTAGATCGCTAGCAAGACTAATAAAGAAGAAAAGAGAGAGAATCAAACAGACACAATAAAAAATGAGTAAGGGAATATCACCACAATCCCACAGAAATACAAACTACCATCAGAGAATAACTATAAAACACCCATGCAATAGAACTAAAAAATTCCTAGAAGAAATGGATAAATTTTCCTGGACACATATAACCCTCCCAAGACTATCCAGGTAAGACTTTGAATCCCTGAATCAGACAGTAAACAGCCGCTGAAATTGAGGCAGTAAATTAATAGCCTACCAACCAAAAAAAGTCCAGGACCAGGACGGATTCACAGTCAAATGTCTACCAGAGCTATAAAGAGGAGCTTGGTACCATTCCTTCTGAAACTATTCCATTCAACAGAAAAAGACGAAATCCTTCCCTAACTCATTCTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCGAGAGGACACAACCAAAAAAAGAGAATTTTAGACCAAATATCCCTGAATGAAACATAGATGCAAAAAACTCAATAAAATACTGGCAAACAAAAATCCAGCAGCACATCCAAAAAGCTTTCAATCCACCATGATTCAGCGTTGGCTTCATCCCTGCGGATGCAAGGCTGGTACAACCATACACAAATCAATAAATGTAATCCATCATATAAACAGAACCAAAGACAAAAACCATATGATTATCTCAATTGATGTAGAAAAGGCCTTCAACAAAATCAAAACAGCCCCATTCATGCCTAAAACTTTCAAAAAACTAGTATTGATGGGACGTATCTCAAAATTAATCAGAGCTATTTATGACAAACACAGCATATCATACTGAATGGGCAAAAAACTGGGAGCCATTCCTTTGAAAAGACATGGCACAAGACAGGATACCCCTCTCCACCACTCCTATTCAACATTGTCTTGGAAATTCTGGCCAGGGCAATCAAGTGCAGGGAAAGAAATAAACTGCATTCAATTAGAAAAGAGGAAGTCAAATTGTACCCTGTTTGCAAATGACATGATCGATATTTAGAAAACCCCATCATCTCAGCCCAAAAATCTCCTTAAGCTGATAAGCAACTCAGCAAAGTCTCAGGATACCAAAATCAATGCTGCAAAAATCACAAGCATTCCTATACACCAATAACAGACACACAGAGAGCCAAATCATGAGTGAACTCCCATTTCACAATGCTCAAAAGAATAAAAATACCTAGGATCCAACTACAAGGATGTGAAGGACCCTCTTCAAGGAGAACTACAAACCACTGCTCAAGAAAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGATAGAAAGAATTCAAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4369:HG4_PB_pbsv_6036:HG3_PB_HySA_9261:HG2_PB_HySA_11159:HG3_PB_SVrefine2Falcon1Dovetail_3749;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_6036;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0330033;ClusterMaxSizeDiff=0.0283828;ClusterMaxEditDist=0.0889179;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1534;DistBack=0;DistForward=51229;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:99623222-99623222;PctSeqSimilarity=0.9603;PctSizeSimilarity=0.9765;PctRecOverlap=0.9765;SizeDiff=36;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=97;MatchId=4444.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:48:0|1:28:0:0:35:./.:0:0:0:0:0/1:28:7:0/1:49:26:.:1441:.
chr5	101075642	HG3_Ill_Spiral_6589	T	TGATTCAAAATATTAGCTTGAAGTAGCCCCTAGATCCCTACTACTTCTGAAAGGTGTACACAG	20	PASS	ClusterIDs=HG2_PB_HySA_11178:HG4_PB_assemblyticsfalcon_21200:HG4_PB_pbsv_6044:HG3_PB_pbsv_5851:HG3_PB_HySA_9268:HG4_Ill_svaba_7829:HG4_Ill_manta_1500:HG4_Ill_Krunchall_8890:HG4_Ill_GATKHC_10142:HG4_Ill_GATKHCSBGrefine_4279:HG4_Ill_Cortex_2973:HG4_Ill_250bpfermikitraw_8463:HG4_Ill_150bpfermikitraw_8102:HG3_Ill_svaba_7805:HG3_Ill_manta_1421:HG3_Ill_Spiral_6589:HG3_Ill_Krunchall_8380:HG3_Ill_GATKHC_9987:HG3_Ill_GATKHCSBGrefine_4047:HG3_Ill_Cortex_2985:HG3_Ill_250bpfermikitraw_8094:HG3_Ill_150bpfermikitraw_7919:HG2_Ill_svaba_7720:HG2_Ill_manta_1726:HG2_Ill_SpiralSDKrefine_13807:HG2_Ill_Krunchall_8570:HG2_Ill_GATKHC_10016:HG2_Ill_GATKHCSBGrefine_4202:HG2_Ill_Cortex_7194:HG2_Ill_250bpfermikitraw_8404:HG2_Ill_150bpfermikitraw_7873;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7873:HG2_Ill_250bpfermikitraw_8404:HG2_Ill_Cortex_7194:HG2_Ill_GATKHCSBGrefine_4202:HG2_Ill_GATKHC_10016:HG2_Ill_Krunchall_8570:HG2_Ill_SpiralSDKrefine_13807:HG2_Ill_manta_1726:HG2_Ill_svaba_7720:HG3_Ill_150bpfermikitraw_7919:HG3_Ill_250bpfermikitraw_8094:HG3_Ill_Cortex_2985:HG3_Ill_GATKHCSBGrefine_4047:HG3_Ill_GATKHC_9987:HG3_Ill_Krunchall_8380:HG3_Ill_Spiral_6589:HG3_Ill_manta_1421:HG3_Ill_svaba_7805:HG4_Ill_150bpfermikitraw_8102:HG4_Ill_250bpfermikitraw_8463:HG4_Ill_Cortex_2973:HG4_Ill_GATKHCSBGrefine_4279:HG4_Ill_GATKHC_10142:HG4_Ill_Krunchall_8890:HG4_Ill_manta_1500:HG4_Ill_svaba_7829;NumExactMatchSVs=26;ClusterMaxShiftDist=0.188976;ClusterMaxSizeDiff=0.173228;ClusterMaxEditDist=0.283465;PBcalls=5;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=-1;DistForward=5;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=5:101075643-101075651;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4445.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:35:0|1:38:1:3:34:./.:0:0:0:0:0/1:19:25:./.:.:.:.:.:.
chr5	102963541	HG4_Ill_manta_1502	T	TTTTAAATTAAATTTAATTAAATTTAATTTAATTTTAAATTAAATTTAATTAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_5856:HG2_PB_pbsv_6021:HG4_PB_HySA_8966:HG3_PB_HySA_9285:HG4_Ill_svaba_7837:HG4_Ill_manta_1502:HG4_Ill_Krunchall_8906:HG4_Ill_GATKHC_10157:HG4_Ill_GATKHCSBGrefine_4285:HG4_Ill_FB_5545:HG4_Ill_250bpfermikitraw_8476:HG4_Ill_150bpfermikitraw_8116:HG3_Ill_svaba_7818:HG3_Ill_manta_1425:HG3_Ill_Spiral_6608:HG3_Ill_Krunchall_8399:HG3_Ill_GATKHC_10011:HG3_Ill_GATKHCSBGrefine_4051:HG3_Ill_FB_5412:HG3_Ill_250bpfermikitraw_8114:HG3_Ill_150bpfermikitraw_7940:HG2_Ill_svaba_7726:HG2_Ill_manta_1731:HG2_Ill_SpiralSDKrefine_13819:HG2_Ill_Krunchall_8587:HG2_Ill_GATKHC_10031:HG2_Ill_GATKHCSBGrefine_4208:HG2_Ill_FB_5455:HG2_Ill_250bpfermikitraw_8417:HG2_Ill_150bpfermikitraw_7883:HG2_PB_HySA_11195:HG2_PB_PB10Xdip_22852;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7883:HG2_Ill_250bpfermikitraw_8417:HG2_Ill_FB_5455:HG2_Ill_GATKHCSBGrefine_4208:HG2_Ill_GATKHC_10031:HG2_Ill_Krunchall_8587:HG2_Ill_SpiralSDKrefine_13819:HG2_Ill_manta_1731:HG2_Ill_svaba_7726:HG3_Ill_150bpfermikitraw_7940:HG3_Ill_250bpfermikitraw_8114:HG3_Ill_FB_5412:HG3_Ill_GATKHCSBGrefine_4051:HG3_Ill_GATKHC_10011:HG3_Ill_Krunchall_8399:HG3_Ill_Spiral_6608:HG3_Ill_manta_1425:HG3_Ill_svaba_7818:HG4_Ill_150bpfermikitraw_8116:HG4_Ill_250bpfermikitraw_8476:HG4_Ill_FB_5545:HG4_Ill_GATKHCSBGrefine_4285:HG4_Ill_GATKHC_10157:HG4_Ill_Krunchall_8906:HG4_Ill_manta_1502:HG4_Ill_svaba_7837;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.146789;PBcalls=6;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=15;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=5:102963526-102963557;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4446.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:61:1/1:1:11:6:16:./.:0:0:0:0:0/1:10:59:./.:.:.:.:.:.
chr5	103360733	HG3_Ill_250bpfermikitraw_8118	T	TAGGGAGGCAACGGAGGAGTGACCCCCGACTGGCTAATAACTGCAAGTTTGGTAGGGCCC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_8419:HG2_PB_PB10Xdip_22855:HG3_PB_pbsv_5859:HG3_PB_HySA_9290:HG4_PB_HySA_8967:HG4_PB_pbsv_6051:HG4_Ill_GATKHC_10160:HG4_Ill_250bpfermikitraw_8479:HG3_Ill_250bpfermikitraw_8118:HG2_PB_HySA_11201:HG2_Ill_GATKHC_10035;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8419:HG4_Ill_GATKHC_10160:HG4_Ill_250bpfermikitraw_8479:HG3_Ill_250bpfermikitraw_8118:HG2_PB_HySA_11201:HG2_Ill_GATKHC_10035;NumExactMatchSVs=6;ClusterMaxShiftDist=0.188976;ClusterMaxSizeDiff=0.173228;ClusterMaxEditDist=0.27907;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=59;DistBack=38918;DistForward=68;DistMin=68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=119;REFWIDENED=5:103360734-103360852;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:22:./.:18:4:15:18:./.:0:0:0:0:0/1:23:5:./.:.:.:.:.:.
chr5	103464407	HG2_Ill_GATKHCSBGrefine_4211	T	TAAGAAATAATATATTTTGCGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3757:HG2_PB_pbsv_6025:HG4_PB_SVrefine2Falcon1Dovetail_3657:HG3_PB_pbsv_5860:HG2_PB_HySA_11203:HG3_PB_SVrefine2PBcRDovetail_2789:HG3_Ill_MetaSV_4245:HG3_Ill_GATKHCSBGrefine_4054:HG2_PB_SVrefine2Falcon2Bionano_2998:HG2_Ill_GATKHCSBGrefine_4211:HG2_PB_SVrefine2Falcon1plusDovetail_9685;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4211:HG2_PB_SVrefine2Falcon2Bionano_2998:HG3_Ill_GATKHCSBGrefine_4054:HG3_Ill_MetaSV_4245;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0535714;ClusterMaxSizeDiff=0.0535714;ClusterMaxEditDist=0.205279;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=326;DistBack=-1;DistForward=13;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=5:103464408-103454580;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:40:0|1:34:2:1:30:./.:0:0:0:0:0/1:24:13:0/1:12:25:.:.:.
chr5	103647982	HG2_10X_SVrefine210Xhap12_4408	T	TAAAACAAGTATCGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAACAAATTAGCCGGGCGTGATGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_11205:HG2_PB_pbsv_6026:HG2_Ill_MetaSV_4065:HG2_Ill_breakscan11_3599:HG3_PB_pbsv_5861:HG2_10X_SVrefine210Xhap12_4408:HG2_PB_PB10Xdip_22857:HG2_PB_SVrefine2PB10Xhap12_4384:HG2_PB_SVrefine2PBcRplusDovetail_9034;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4408;NumExactMatchSVs=1;ClusterMaxShiftDist=0.116386;ClusterMaxSizeDiff=0.113323;ClusterMaxEditDist=0.251108;PBcalls=6;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=335;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=5:103647983-103647994;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4450.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:55:./.:13:30:15:7:./.:0:0:0:0:0/1:28:8:0/1:7:41:.:.:.
chr5	103738433	HG4_PB_HySA_8969	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTAAAGTTAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4385:HG2_PB_PB10Xdip_22858:HG4_PB_HySA_8969:HG3_PB_pbsv_5862:HG4_PB_pbsv_6052:HG2_PB_pbsv_6027:HG3_PB_HySA_9293:HG2_PB_HySA_11207:HG2_Ill_breakscan11_3600:HG2_PB_SVrefine2Falcon2Bionano_2999:HG2_PB_SVrefine2PBcRplusDovetail_9035;NumClusterSVs=11;ExactMatchIDs=HG4_PB_HySA_8969;NumExactMatchSVs=1;ClusterMaxShiftDist=0.204301;ClusterMaxSizeDiff=0.204301;ClusterMaxEditDist=0.25;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=294;DistBack=13;DistForward=1769;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=5:103738419-103738436;PctSeqSimilarity=0.9951;PctSizeSimilarity=0.9899;PctRecOverlap=0.963;SizeDiff=-3;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=98;MatchId=4451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:68:1|0:5:51:23:0:./.:0:0:0:0:0/1:24:14:./.:.:.:.:.:.
chr5	105107607	HG3_PB_SVrefine2PBcRDovetail_2794	T	ATATATATATATTTATATATATATTATATATATATTTATATATATATTATATATATATATATATATATTTATATATATATTATATATATATTTATATATATATTATATATATATTTATATATATAA	20	PASS	ClusterIDs=HG3_PB_pbsv_5869:HG4_Ill_SVrefine2DISCOVARDovetail_4459:HG3_PB_SVrefine2Falcon1Dovetail_3762:HG3_PB_assemblyticsfalcon_21683:HG2_PB_SVrefine2Falcon2Bionano_3003:HG4_Ill_GATKHC_10173:HG3_PB_SVrefine2PBcRDovetail_2794:HG2_PB_pbsv_6034;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_2794;NumExactMatchSVs=1;ClusterMaxShiftDist=0.388626;ClusterMaxSizeDiff=0.388626;ClusterMaxEditDist=0.388626;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=125;DistBack=36;DistForward=44;DistMin=36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=228;REFWIDENED=5:105107424-105107651;PctSeqSimilarity=0.9882;PctSizeSimilarity=0.9843;PctRecOverlap=0.9843;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4452.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:./.:6:13:15:9:./.:0:0:0:0:./.:2:23:./.:.:.:.:.:.
chr5	106180893	HG2_PB_pbsv_6038	A	ATACAAACTGGATCTTTTTTTTTTTTGTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGCCCAGGGCTGGAGTGCCAGTGGCGGCGATCTCGGCTCACTGCAAGCTCGCCTCCCGCGGTTCACGCCATTCTCCTGCCGTCAGCCTCCCAACGTAGCTGGGAACTACAGCGCCCGCCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTAGCCGGGATGTGGTCTCACTCTTCTTTGACCTCGTTGATCCGCCCGCCGTCGGCCCCCAAAGTTTGCATGGACGGATTACAGGCGTGAGCCACCGCGCCCGGC	10	PASS	ClusterIDs=HG3_PB_HySA_9317:HG3_PB_pbsv_5875:HG2_PB_SVrefine2PB10Xhap12_4390:HG2_PB_PB10Xdip_22874:HG3_PB_SVrefine2PBcRDovetail_2796:HG2_PB_SVrefine2Falcon1plusDovetail_9689:HG3_PB_SVrefine2Falcon1Dovetail_3765:HG4_PB_SVrefine2Falcon1Dovetail_3662:HG2_PB_pbsv_6038:HG2_PB_HySA_11225;NumClusterSVs=10;ExactMatchIDs=HG2_PB_pbsv_6038;NumExactMatchSVs=1;ClusterMaxShiftDist=0.105882;ClusterMaxSizeDiff=0.105882;ClusterMaxEditDist=0.238429;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=354;DistBack=10130;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=5:106180894-106180908;PctSeqSimilarity=0.9459;PctSizeSimilarity=0.9774;PctRecOverlap=0.9775;SizeDiff=8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=4453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:50:0|1:25:1:1:38:./.:0:0:0:0:./.:27:3:0/1:7:9:.:.:.
chr5	106811747	HG2_PB_SVrefine2PBcRplusDovetail_9041	C	CTATATATATATATATATATATATATATATATATATATGTATATATATATATATATGTGTGTATATATATATGTATATATATATATATGTGTGTGTGTATATATATATATGTGTATATATATATATATGTA	20	PASS	ClusterIDs=HG4_PB_pbsv_6067:HG3_PB_pbsv_5881:HG3_PB_HySA_9326:HG4_PB_SVrefine2Falcon1Dovetail_3666:HG4_PB_assemblyticsfalcon_21239:HG3_PB_SVrefine2Falcon1Dovetail_3767:HG4_PB_SVrefine2PBcRDovetail_3020:HG2_PB_pbsv_6045:HG4_PB_HySA_8995:HG2_PB_HySA_11229:HG4_Ill_SVrefine2DISCOVARDovetail_4462:HG3_PB_SVrefine2PBcRDovetail_2798:HG3_Ill_SVrefine2DISCOVARDovetail_4554:HG2_PB_SVrefine2Falcon1plusDovetail_9693:HG4_Ill_GATKHCSBGrefine_4300:HG2_PB_SVrefine2PBcRplusDovetail_9041:HG2_PB_SVrefine2PB10Xhap12_4395:HG2_PB_SVrefine2Falcon2Bionano_3007:HG2_Ill_manta_1737:HG2_Ill_GATKHCSBGrefine_4223:HG4_Ill_MetaSV_4237:HG3_Ill_Spiral_6630:HG3_Ill_MetaSV_4249:HG2_Ill_MetaSV_4070:HG3_Ill_GATKHCSBGrefine_4094:HG2_Ill_SVrefine2DISCOVARplusDovetail_10532:HG2_PB_PB10Xdip_22888:HG3_PB_assemblyticsfalcon_21697:HG2_PB_assemblyticsfalcon_21770:HG2_PB_assemblyticsPBcR_21024;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4223:HG2_Ill_manta_1737:HG2_PB_SVrefine2Falcon2Bionano_3007:HG2_PB_SVrefine2PB10Xhap12_4395:HG2_PB_SVrefine2PBcRplusDovetail_9041:HG4_Ill_GATKHCSBGrefine_4300;NumExactMatchSVs=6;ClusterMaxShiftDist=0.262172;ClusterMaxSizeDiff=0.262172;ClusterMaxEditDist=0.359551;PBcalls=19;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=130;DistBack=69954;DistForward=6803;DistMin=6803;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=5:106811748-106811758;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9848;PctRecOverlap=0.985;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4454.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:./.:2:9:0:4:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr5	107963794	HG2_Ill_GATKHCSBGrefine_4228	A	ATTTACTTCTTATATGAGATCTTCAGTTCACATTTCTTTTTCTACACAGAGCTCACCAGGAAGCCTAGGAGGCACATAGAGTTTTTCCTGAGGGGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	20	PASS	ClusterIDs=HG4_PB_pbsv_6072:HG3_PB_pbsv_5886:HG2_PB_pbsv_6054:HG2_PB_PB10Xdip_22894:HG4_Ill_SVrefine2DISCOVARDovetail_4465:HG3_Ill_SVrefine2DISCOVARDovetail_4563:HG2_PB_SVrefine2PB10Xhap12_4402:HG2_PB_SVrefine2Falcon1plusDovetail_9699:HG2_Ill_SVrefine2DISCOVARplusDovetail_10538:HG2_10X_SVrefine210Xhap12_4428:HG4_PB_SVrefine2Falcon1Dovetail_3671:HG3_PB_SVrefine2Falcon1Dovetail_3772:HG3_PB_SVrefine2PBcRDovetail_2801:HG4_PB_SVrefine2PBcRDovetail_3024:HG4_Ill_manta_1511:HG4_Ill_MetaSV_4238:HG4_Ill_GATKHCSBGrefine_4302:HG3_Ill_Spiral_6638:HG3_Ill_MetaSV_4251:HG3_Ill_GATKHCSBGrefine_4098:HG2_PB_SVrefine2PBcRplusDovetail_9046:HG2_PB_SVrefine2Falcon1plusDovetail_9700:HG2_Ill_manta_1739:HG2_Ill_MetaSV_4073:HG2_Ill_GATKHCSBGrefine_4228:HG4_PB_assemblyticsfalcon_21248:HG3_PB_assemblyticsfalcon_21705;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4228:HG2_Ill_MetaSV_4073:HG2_Ill_manta_1739:HG2_PB_SVrefine2Falcon1plusDovetail_9700:HG2_PB_SVrefine2PBcRplusDovetail_9046:HG3_Ill_GATKHCSBGrefine_4098:HG3_Ill_MetaSV_4251:HG3_Ill_Spiral_6638:HG4_Ill_GATKHCSBGrefine_4302:HG4_Ill_MetaSV_4238:HG4_Ill_manta_1511:HG4_PB_SVrefine2PBcRDovetail_3024;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0852713;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.172932;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=125;DistBack=0;DistForward=12117;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=5:107963795-107963794;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:28:1:34:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr5	108026581	HG2_10X_SVrefine210Xhap12_4429	T	TAAAACTTTTTATTGGCCAGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3601:HG2_PB_pbsv_6055:HG4_PB_pbsv_6073:HG4_PB_assemblyticsfalcon_21251:HG2_PB_PB10Xdip_22895:HG2_PB_SVrefine2PB10Xhap12_4403:HG2_PB_SVrefine2Falcon2Bionano_3011:HG4_Ill_MetaSV_4239:HG4_Ill_GATKHCSBGrefine_4303:HG3_Ill_MetaSV_4252:HG3_Ill_GATKHCSBGrefine_4100:HG2_PB_SVrefine2PBcRplusDovetail_9047:HG2_PB_SVrefine2Falcon1plusDovetail_9701:HG2_Ill_MetaSV_4074:HG2_Ill_GATKHCSBGrefine_4229:HG2_10X_SVrefine210Xhap12_4429:HG4_PB_SVrefine2Falcon1Dovetail_3672:HG3_PB_pbsv_5888:HG2_PB_HySA_11244:HG4_PB_HySA_9004;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4429:HG2_Ill_GATKHCSBGrefine_4229:HG2_Ill_MetaSV_4074:HG2_PB_SVrefine2Falcon1plusDovetail_9701:HG2_PB_SVrefine2PBcRplusDovetail_9047:HG3_Ill_GATKHCSBGrefine_4100:HG3_Ill_MetaSV_4252:HG4_Ill_GATKHCSBGrefine_4303:HG4_Ill_MetaSV_4239;NumExactMatchSVs=9;ClusterMaxShiftDist=0.119548;ClusterMaxSizeDiff=0.119548;ClusterMaxEditDist=0.253289;PBcalls=12;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=311;DistBack=1011;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:108026582-108026595;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:92:./.:6:7:0:26:./.:0:0:0:0:1/1:0:17:1/1:2:63:.:.:.
chr5	108108032	HG4_Ill_Krunchall_8956	T	TATACACATATATATGTATGTATATATATATATACACATATATATGTATGTATATATATATATAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_22896:HG2_Ill_manta_1740:HG2_Ill_SpiralSDKrefine_13848:HG2_PB_HySA_11246:HG4_Ill_GATKHCSBGrefine_4304:HG2_Ill_GATKHCSBGrefine_4230:HG4_Ill_svaba_7870:HG4_Ill_Krunchall_8956:HG4_Ill_250bpfermikitraw_8530:HG4_Ill_150bpfermikitraw_8166:HG2_Ill_svaba_7762:HG2_Ill_Krunchall_8643:HG2_Ill_250bpfermikitraw_8462:HG2_Ill_150bpfermikitraw_7931:HG4_PB_HySA_9005:HG2_PB_SVrefine2PB10Xhap12_4404:HG2_PB_SVrefine2PBcRplusDovetail_9048:HG2_PB_pbsv_6056:HG4_PB_pbsv_6074;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7931:HG2_Ill_250bpfermikitraw_8462:HG2_Ill_Krunchall_8643:HG2_Ill_svaba_7762:HG4_Ill_150bpfermikitraw_8166:HG4_Ill_250bpfermikitraw_8530:HG4_Ill_Krunchall_8956:HG4_Ill_svaba_7870;NumExactMatchSVs=8;ClusterMaxShiftDist=0.338983;ClusterMaxSizeDiff=0.338983;ClusterMaxEditDist=0.338983;PBcalls=7;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=10;DistForward=71675;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=44;REFWIDENED=5:108108009-108108052;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:33:0|1:28:0:2:31:./.:0:0:0:0:0/1:17:21:./.:.:.:.:.:.
chr5	108266073	HG2_PB_PB10Xdip_22912	T	TCCCTCCCCTCTCCTCTCCCCTCCTTCCCCTCCCCTCTCCTCTCCCCTCCCCTCCCCCCCTTCCTCTGCCCTCCCTTCCCCTCCCCCCTCCTCCTCTCCTCTCCCCTCTTTTCCTCCCCTCCCCTTCTCCTCCCATCCCTTCCCTTATCCTCCCCTTCTCCTCCCCTCACCTTCTCCTCTCCTCCCCTCCCCTTCTCCTCTCCTCTCCTCCCCTCCCCTTCTCCTCTCCTCCTCTCACCTCCCTTCTCCTCCCCTCCCCTTCTCCTGTCCTCCCCTCCCCTTCTCCTCTCCTCCCCTTCTCTTCCCTTCCCCTCCCTCCCCTTTTCCTCCCCTCCCTGCCCCTCCCCTCTCCTCCCGTCTCCTCCCTTCCCCTCTCTTCCCCTCCTCTTCTCCCCTCCCCTCCCCCTCTCCTCCCTTCCTCGCCCCTCCCCTTTTTCTCTCTTCCCCTCCCTTTCCCACCCCTTCTCCTCCCCTCTTCCCCTCTTTTCCCTCCCCTCCTTTTTTCCTCCCCTTCTTCTCCCCTCCCCTTCTCCTCTCCTCCCCTCCCCTCCCCTTTTCCACCCCTTTTCCTCTTCTTTTCTTCCTCTCCCCTCTCCTCCCCTCCCCTCTGCCTCTCCTCCCCTCCCCTCTGCCTCTCCTCCCCTCCCCTTTTTCTCCCCTCCCCTCCCTGCCTCTTCTCCTTTCCTCCCTTCCCCTCCCCTCCCCTCTCCTTTCCCTCCCCTCCCCTCCCTTTCCTGCCCCTTCTCCTCACCTCTCTTCCCCTCCCCTCTCTTCCCCTCTCCTTTCC	20	PASS	ClusterIDs=HG2_PB_pbsv_6058:HG2_PB_HySA_11252:HG4_PB_pbsv_6076:HG2_Ill_breakscan11_3602:HG2_PB_PB10Xdip_22912:HG2_PB_SVrefine2Falcon2Bionano_3013:HG3_PB_SVrefine2PBcRDovetail_2802:HG2_PB_SVrefine2PBcRplusDovetail_9049:HG4_PB_SVrefine2PBcRDovetail_3025:HG2_PB_SVrefine2PB10Xhap12_4406:HG4_PB_SVrefine2Falcon1Dovetail_3674:HG2_PB_SVrefine2Falcon1plusDovetail_9702:HG3_PB_pbsv_5889;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_22912;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0785307;ClusterMaxSizeDiff=0.0772641;ClusterMaxEditDist=0.247975;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=786;DistBack=-240;DistForward=7;DistMin=-240;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=5:108266074-108266073;PctSeqSimilarity=0.9987;PctSizeSimilarity=0.9975;PctRecOverlap=0.9975;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:26:1:14:./.:0:0:0:0:./.:0:1:0/1:5:35:.:.:.
chr5	108481945	HG2_Ill_svaba_7764	A	ATATTATCTATCTAATATATATATATATTATCTATCTAATATATATATATATT	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_21255:HG4_Ill_svaba_7872:HG2_Ill_svaba_7764;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_svaba_7764:HG4_Ill_svaba_7872;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0582524;ClusterMaxSizeDiff=0.0582524;ClusterMaxEditDist=0.0582524;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=43;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=109;REFWIDENED=5:108481884-108481992;PctSeqSimilarity=0.8243;PctSizeSimilarity=0.6842;PctRecOverlap=0.6883;SizeDiff=-24;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=73;MatchId=4459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:33:0|1:45:1:0:28:./.:0:0:0:0:0/1:16:15:./.:.:.:.:.:.
chr5	108676322	HG4_PB_HySA_9012	T	TCCTCCCTCCCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCTCTCCTCTCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCCCTCTCCCTCTC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3026:HG4_PB_pbsv_6078:HG4_PB_HySA_9012:HG2_PB_PB10Xdip_22913:HG2_PB_pbsv_6060:HG2_PB_SVrefine2Falcon2Bionano_3014:HG2_PB_SVrefine2PB10Xhap12_4407;NumClusterSVs=7;ExactMatchIDs=HG4_PB_HySA_9012;NumExactMatchSVs=1;ClusterMaxShiftDist=0.192593;ClusterMaxSizeDiff=0.192593;ClusterMaxEditDist=0.211302;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=221;DistBack=126209;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=57;REFWIDENED=5:108676323-108676379;PctSeqSimilarity=0.9291;PctSizeSimilarity=0.9005;PctRecOverlap=0.7557;SizeDiff=22;StartDistance=-43;EndDistance=-43;GTMatch=0;TruScore=86;MatchId=4460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:20:./.:17:12:9:7:./.:0:0:0:0:./.:7:0:./.:.:.:.:.:.
chr5	109480257	HG2_PB_SVrefine2Falcon2Bionano_3016	T	TGCAGGTCATTTCTTTTTTTTTTTTTTTTTTATTATTATTATTATTATTATTATTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACCGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATCTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTCTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCAGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTCTGTTCCGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTTGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTCCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCATC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3603:HG2_PB_pbsv_6063:HG3_PB_pbsv_5890:HG4_PB_pbsv_6084:HG3_PB_assemblyticsfalcon_21718:HG4_PB_assemblyticsfalcon_21265:HG2_PB_HySA_11265:HG3_PB_SVrefine2PBcRDovetail_2803:HG4_PB_SVrefine2PBcRDovetail_3031:HG2_10X_SVrefine210Xhap12_4432:HG2_PB_SVrefine2Falcon1plusDovetail_9705:HG2_PB_SVrefine2PB10Xhap12_4410:HG2_PB_SVrefine2Falcon2Bionano_3016:HG3_PB_HySA_9338:HG2_PB_PB10Xdip_22922;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3016:HG2_PB_SVrefine2PB10Xhap12_4410;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0514309;ClusterMaxSizeDiff=0.0514309;ClusterMaxEditDist=0.180858;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=6080;DistBack=35864;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=5:109480258-109480269;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4461.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:91:./.:0:0:0:0:./.:0:0:0:0:1/1:0:18:1/1:0:1451:.:6014:.
chr5	112481992	HG2_PB_SVrefine2PBcRplusDovetail_9053	G	GAACAAGAAACAGGGATACAAGTGGGAAGGTAGGGAGAAGAAGAGATACTAGGATGGTATCCTGGGGATTCTTTCCCCAGTGAAAAGAGAATACCAGAAAAAAGTTACCAAAACAGACTCCTAGCCGGTGGATGTATCAATGACGGAGAAGCCGCTGCTCAAGGTTCCTCTCTACAAATCAACATCCTCTCATTAAACATACTTCACTCATTTGTGCACACTCATTGTATCCAGCCAAAGAGGCTGAAACACTGATCTCAAAGCTTAGTGAAAATCCACTGAGCATTTCCAAGCTGCAGTGCAGGGAAAAGCAGAGCAAATCCCACAGGGCAACAACACAGGAGGAAACAAGCCATCACCTGCAAAAGCCGAAAGAACCAACACAGCACCCTTGTTTTTTTGTTTTTTTGTTTTTTTTTTGAGACGAAGCCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCTCTGCTCACTGCAAGCTCCGCCTCCTGGGTTCCCGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCCGCCACCACACCCGGCTCATTTTTTTGTATTTTTTTTAGTAGAAACGGTGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTTGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAACACCCTTGTTCAACAGCACCCATCCAACTGCTCATGAGTCAACCCTGGGAATGTGGCACTTTAGTGCAGGGAATGTGGCACTTTAGTGCAGGAAAAGTGGAAGATGAGCAGGTGGCGCCCAGGGCAGACAAAGCCATTCTGTGCACCATTGCTGGCCTTCCTGTCCTGGTGACCTCCCACACAGGCAGGAGCAGCTTGTTAAAGTGAGGCCCACTTCTGTCACCACACTCTAGTTCTTTACTGACCTGTTGCCTCTCATCACCTTGAGTTTTCATGACCTGGGACAACACTTTTTTTTTTTTTCTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGTGGCGGGGTGATCTCAGCTCACTACAACCTCTGCCTCCCAGGTTCAACTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGGGTGTGCCACCATGCTCAGCTAATTTTTTTATTTTTAGTAAAGGTGGGGTTTCACCATGTTGGCCAGGCCAGTCTCGAACCCCTGACCTCAAATGATTCGCCTGCCTCAGCCTCCCAAAGTGCTGGATTACAGGCATGAGGCACTGCGCCCAGCCCTGGGAGAGCACTTTTTAACCCAGGATGGTGTGTGGTTTCAGGTGTTCTGTTTAATAAGGACACAGGCTAGGCCAAGCTCAACACTGCACCTCTACGTACAAGTCACCTAGGAGTACGTGTTCCTGTAAGGCCTCATTCAGGAAGGTAACACAATGACAACAACCAAACAGGGAAAAGAGGTTCTCTTCTATAATTACTACTTAACATTTGCATAAGTTTTCCAATTTTTAAGTTAAAAATTTAAGTACGGTATAGACTCTCAAAAAATTGATACAAGACCCACCCATTTTTTTGTAATTTCCCTAACGCATTTTTTTTTCTGAATACTGTTAATTTCTCCCCATTATTTTCTTATGTACATGATGCTCCATCCACCAGGACCACCATGTGGTATAACAAATACTCCTGTGGCACCAAGCCTCTGGTTTGCCTCCATCCATGCACATGGTAGGATTATGCTCCTCCTGCTTGAAGCTAAATATGGCCATGCCACTTATTTTGGCCAATAAGATATAAATGAATATACACCATTTTGCCTAGAAGCCTTTAAGAGCTCCTGTTGGGCTTGCCACATTCCCTTTCCCAGGCCATGGCCACTAACGACATTCCACATGGTAGAGGCCCTCGGCTTGGAAGCCCGGGTAGGGACAATATAGCACAGAGTCTCCTGCCAGGCCCAGTGAGCTCCCAATAGAAAATAAGAAATCAATCTTTGATATCTTAGGCCACTGAAAATTTGAAACTATTTGCTTTCACTGCATAGCTTGACACCATCATTTTGTAGATAAGAAAACAGACTCAATGTGAAGCAACTGATTTATTTCCTGTAACCCAGGT	20	PASS	ClusterIDs=HG4_PB_HySA_9033:HG2_PB_pbsv_6067:HG3_PB_pbsv_5893:HG4_PB_pbsv_6088:HG3_PB_SVrefine2Falcon1Dovetail_3776:HG2_PB_SVrefine2Falcon1plusDovetail_9708:HG4_PB_SVrefine2Falcon1Dovetail_3678:HG2_PB_SVrefine2Falcon2Bionano_3018:HG4_PB_SVrefine2PBcRDovetail_3033:HG4_Ill_SVrefine2DISCOVARDovetail_4480:HG2_PB_SVrefine2PBcRplusDovetail_9053:HG2_PB_SVrefine2PB10Xhap12_4412:HG2_Ill_SVrefine2DISCOVARplusDovetail_10556:HG2_10X_SVrefine210Xhap12_4438:HG3_Ill_SVrefine2DISCOVARDovetail_4577:HG3_PB_SVrefine2PBcRDovetail_2806:HG3_PB_HySA_9350:HG2_PB_PB10Xdip_22924:HG2_Ill_breakscan11_3604;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4438:HG2_Ill_SVrefine2DISCOVARplusDovetail_10556:HG2_PB_SVrefine2PB10Xhap12_4412:HG2_PB_SVrefine2PBcRplusDovetail_9053:HG4_Ill_SVrefine2DISCOVARDovetail_4480:HG4_PB_SVrefine2PBcRDovetail_3033;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0545246;ClusterMaxSizeDiff=0.0545246;ClusterMaxEditDist=0.193258;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=2132;DistBack=509;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=5:112481993-112481997;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4462.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:97:./.:0:0:0:0:./.:0:0:0:0:1/1:0:39:1/1:14:300:.:2149:.
chr5	114522076	HG2_PB_SVrefine2PB10Xhap12_4423	CAC	AAGTACTTATATTTAATACTTAATGAATAAATATACTTACTTTACAATGGACTTATTGTAAAGTACTTACAATGTAAATATAAAAAGTACACAGG	20	PASS	ClusterIDs=HG2_PB_pbsv_6076:HG3_PB_SVrefine2PBcRDovetail_2811:HG2_PB_HySA_11293:HG4_PB_HySA_9044:HG3_PB_HySA_9359:HG4_PB_assemblyticsfalcon_21282:HG4_PB_SVrefine2PBcRDovetail_3038:HG4_PB_SVrefine2Falcon1Dovetail_3683:HG4_Ill_manta_1516:HG4_Ill_SVrefine2DISCOVARDovetail_4488:HG4_Ill_Cortex_2983:HG3_PB_assemblyticsfalcon_21740:HG3_PB_SVrefine2Falcon1Dovetail_3781:HG3_Ill_manta_1438:HG3_Ill_Spiral_6664:HG3_Ill_Cortex_3000:HG2_PB_assemblyticsPBcR_21074:HG2_PB_SVrefine2PBcRplusDovetail_9061:HG2_PB_SVrefine2PB10Xhap12_4423:HG2_PB_SVrefine2Falcon2Bionano_3025:HG2_PB_SVrefine2Falcon1plusDovetail_9714:HG2_PB_PB10Xdip_22932:HG2_Ill_manta_1746:HG2_Ill_SpiralSDKrefine_13869:HG2_Ill_SVrefine2DISCOVARplusDovetail_10564:HG2_Ill_Cortex_7230:HG2_10X_SVrefine210Xhap12_4446:HG4_PB_pbsv_6096:HG4_Ill_Krunchall_9000:HG4_Ill_GATKHCSBGrefine_4312:HG4_Ill_250bpfermikitraw_8574:HG4_Ill_150bpfermikitraw_8204:HG3_Ill_Krunchall_8482:HG3_Ill_GATKHC_10102:HG3_Ill_GATKHCSBGrefine_4107:HG3_Ill_250bpfermikitraw_8205:HG3_Ill_150bpfermikitraw_8023:HG2_Ill_Krunchall_8679:HG2_Ill_GATKHCSBGrefine_4242:HG2_Ill_250bpfermikitraw_8499:HG2_Ill_150bpfermikitraw_7972:HG3_PB_pbsv_5899;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4446:HG2_Ill_Cortex_7230:HG2_Ill_SVrefine2DISCOVARplusDovetail_10564:HG2_Ill_SpiralSDKrefine_13869:HG2_Ill_manta_1746:HG2_PB_PB10Xdip_22932:HG2_PB_SVrefine2Falcon1plusDovetail_9714:HG2_PB_SVrefine2Falcon2Bionano_3025:HG2_PB_SVrefine2PB10Xhap12_4423:HG2_PB_SVrefine2PBcRplusDovetail_9061:HG2_PB_assemblyticsPBcR_21074:HG3_Ill_Cortex_3000:HG3_Ill_Spiral_6664:HG3_Ill_manta_1438:HG3_PB_SVrefine2Falcon1Dovetail_3781:HG3_PB_assemblyticsfalcon_21740:HG4_Ill_Cortex_2983:HG4_Ill_SVrefine2DISCOVARDovetail_4488:HG4_Ill_manta_1516:HG4_PB_SVrefine2Falcon1Dovetail_3683:HG4_PB_SVrefine2PBcRDovetail_3038:HG4_PB_assemblyticsfalcon_21282;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0860215;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.242105;PBcalls=18;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=11;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=92;DistBack=0;DistForward=11141;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:114522079-114522075;PctSeqSimilarity=0.9895;PctSizeSimilarity=0.9891;PctRecOverlap=0.9579;SizeDiff=1;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=97;MatchId=4463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:0:21:1:23:./.:0:0:0:0:1/1:0:51:./.:.:.:.:.:.
chr5	114739722	HG4_Ill_GATKHCSBGrefine_4314	T	TTAGAATGTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3605:HG2_PB_pbsv_6078:HG3_PB_pbsv_5901:HG4_PB_pbsv_6098:HG4_PB_HySA_9047:HG3_PB_SVrefine2PBcRDovetail_2813:HG3_Ill_MetaSV_4258:HG2_PB_SVrefine2PB10Xhap12_4425:HG2_PB_SVrefine2Falcon1plusDovetail_9716:HG4_PB_SVrefine2PBcRDovetail_3040:HG4_Ill_MetaSV_4245:HG4_Ill_GATKHCSBGrefine_4314:HG2_PB_SVrefine2Falcon2Bionano_3027:HG2_PB_PB10Xdip_22933:HG2_Ill_MetaSV_4083:HG2_Ill_GATKHCSBGrefine_4244:HG2_10X_SVrefine210Xhap12_4448:HG4_PB_SVrefine2Falcon1Dovetail_3685:HG2_PB_SVrefine2PBcRplusDovetail_9063:HG3_PB_SVrefine2Falcon1Dovetail_3783:HG3_PB_HySA_9364;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4448:HG2_Ill_GATKHCSBGrefine_4244:HG2_Ill_MetaSV_4083:HG2_PB_PB10Xdip_22933:HG2_PB_SVrefine2Falcon2Bionano_3027:HG4_Ill_GATKHCSBGrefine_4314:HG4_Ill_MetaSV_4245:HG4_PB_SVrefine2PBcRDovetail_3040;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0753425;ClusterMaxEditDist=0.160804;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=290;DistBack=2074;DistForward=16775;DistMin=2074;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:114739723-114739736;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4464.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:10:0:30:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr5	114799003	HG2_PB_PB10Xdip_22935	CAT	TAAATGGAGCCCACAGGTCAGTAAGTTCCGCCCACACACACAGGGCCTCTGAACAGTCTTTAAATGCTCACTCTTAATGTGAACAGAGTGCCAAGGCTCCCAGATGGCTGAGGAAAGCCTCTAGCATGAAAGAGAAAGACCAATGCAAGAAAAAATTTAAAAAAATAAATCTGGAGAAAACAAATAATAGAAGAGGATATAAGATTTTAAAGTTATAACCCTTAGTGAAATAAGTGAAGACAGGCCAGGCACGGTGGCTCACGCCTGTAATCCCAACACTTCGGGAGGCCAAGGCGGTGGATCACGAGGTCAGGAGATTGAGACTATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAAAAAAAAAATACAAAAAATTAGCCGGGCATGGTGGTGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGACTGCGCCACTGCACTCCAGCCTGGGCGACAAAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAATAAGTGAAGACATTGTATCCTTATAACCAGAAATAGAGGTAATGTAAAAAAGTGAGTCAAAAACAAGAAATAAAAGTTTCTTCTGGAAATAAAAATGTAATCAAAATAAAACATCCAATAGAAGAATTGAGGAATAAATTTGAAGAAATCTTTTAACAGATAGCACAGAAAGAAATTGCACGAAAAAATTAGGAAGGAAAAGGTGAGTGGTATAAAGGATGAATCTAAGAAACCTAACTAACATTCAACCAAATGATTTGTAAAAGATCGTCATCCGAGTTAATGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACA	20	PASS	ClusterIDs=HG2_PB_pbsv_6080:HG2_PB_PB10Xdip_22935:HG3_PB_pbsv_5903:HG4_PB_pbsv_6100:HG3_PB_assemblyticsfalcon_21744:HG2_10X_SVrefine210Xhap12_4450:HG3_Ill_SVrefine2DISCOVARDovetail_4587:HG2_PB_SVrefine2Falcon2Bionano_3029:HG2_PB_SVrefine2Falcon1plusDovetail_9718:HG2_PB_SVrefine2PB10Xhap12_4427:HG3_PB_SVrefine2Falcon1Dovetail_3785:HG2_PB_HySA_11299;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_22935;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0607735;ClusterMaxSizeDiff=0.0552486;ClusterMaxEditDist=0.229834;PBcalls=10;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=899;DistBack=0;DistForward=6032;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:114799006-114799002;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9912;PctRecOverlap=0.9923;SizeDiff=-8;StartDistance=3;EndDistance=5;GTMatch=0;TruScore=99;MatchId=4465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:61:0|1:34:0:0:51:./.:0:0:0:0:0/1:29:5:0/1:38:60:.:.:.
chr5	115449062	HG3_PB_SVrefine2Falcon1Dovetail_3788	T	TGGAATTTTTCTTTTTTTTTTTTTTTTTTGGTTTAAAACATTTATTATTGTTCAAGCATCTACAGATTAGCTAAGGGTAGGCTGAGCTCATCTGGGGTGATTCTGCTCCATGTGTTTCTCATTCTCCATAAACCACAAACAAAATAATAATAATAATAATAATAGTATTTTTTTAAGTTCTCACTTGTTGAAGGCTTACTATGTGCTAAAAGCACTTTAAAATGTTATCTCCTTTACTTCTCACAAAAACATTATGAGGTAGGTACTACTAATATCCTAATTTCACAGATGAGGAAACAAAGAAGGAATTTCCCCAAGCTCAAGAAGCTACTGTATGGTGAACCTGGAGCACACAGATGAAGGTCTACCTGACACTAAACTTTATGTTCTTAATCATTCTGTTATATTCTGTTTCATGAAATTTACTATTCCATTTTCAGAGAGTTCTAACCACTAAGAAGTTATTCTTATATTCAGTGAAATGATTTTCTCTATAACTTTTAATCACTGATCTTAATTTGGCCCTTGAGTACATACAGGATAAAGATAATAATCATAAATTAAATGATATAGTAAAAGTGCCTGACAAACAGAATGTGTTCCACAAAAATTAATCTAAGTCAGCCCCACAATAGGCATAACAGTCGTTAATAAAATGTTCAACCGGGCAGGGCCAGAATTATTTGCAGTTTTACCCAGTTGGCACTTATCCTATTATACAGAAAACTATCCAACCTAGGATAAATACAATGTTTAAGTCCAGATATACTGTGTCTATAACATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTTTATTTTTTTTTTTTTTACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGATCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGGCTCTGCGTTTTAGAGTTTCCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACACTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGTGCCTCCAGTTAGGCTGCTCGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCCGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGTGCGTCCGTCACCCCTTTCTTTGACTCGAAAGGGAACTCCCTGACCCCTTGCACTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGATATCACCCGTCTTCTGCGTCGCTCACGCTGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTTCTCCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3788:HG2_PB_assemblyticsPBcR_21085:HG2_PB_PB10Xdip_22937:HG2_PB_SVrefine2Falcon1plusDovetail_9722:HG2_PB_SVrefine2PBcRplusDovetail_9068:HG2_PB_SVrefine2Falcon2Bionano_3033:HG2_PB_SVrefine2PB10Xhap12_4432;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_3788;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0023356;ClusterMaxSizeDiff=0.00233543;ClusterMaxEditDist=0.00817459;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6842;DistBack=1905;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9584;REFWIDENED=5:115449063-115440314;PctSeqSimilarity=0.9961;PctSizeSimilarity=0.9978;PctRecOverlap=0.998;SizeDiff=-15;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4468.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:48:./.:19:20:10:20:./.:0:0:0:0:0/1:28:10:0/1:213:670:.:6524:.
chr5	116360537	HG4_Ill_GATKHCSBGrefine_4325	T	TATATATTATATATATAATATATAATATATTATATAATATATAATATATAATATATTATATATTATATATATAATATATTATATATTATATATAATATATA	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_4594:HG3_Ill_scalpel_6077:HG3_PB_pbsv_5912:HG2_PB_HySA_11322:HG3_PB_HySA_9387:HG2_PB_SVrefine2Falcon1plusDovetail_9725:HG4_PB_pbsv_6114:HG2_PB_assemblyticsfalcon_21842:HG4_Ill_GATKHC_10263:HG4_Ill_GATKHCSBGrefine_4325:HG4_Ill_150bpfermikitraw_8224:HG3_Ill_Spiral_6680:HG2_Ill_scalpel_5979:HG2_Ill_SpiralSDKrefine_13884:HG2_Ill_Krunchall_8701:HG2_Ill_GATKHC_10149:HG2_Ill_GATKHCSBGrefine_4254:HG2_Ill_250bpfermikitraw_8518:HG2_Ill_150bpfermikitraw_7991:HG3_Ill_manta_1445:HG4_PB_assemblyticsfalcon_21313:HG3_Ill_Krunchall_8503:HG3_Ill_GATKHC_10124:HG3_Ill_GATKHCSBGrefine_4116:HG3_Ill_250bpfermikitraw_8227:HG2_PB_PB10Xdip_22939:HG2_PB_HySA_11321:HG2_Ill_breakscan11_3606:HG2_PB_pbsv_6089:HG4_Ill_SVrefine2DISCOVARDovetail_4501:HG2_PB_SVrefine2PBcRplusDovetail_9072:HG2_PB_SVrefine2PB10Xhap12_4437:HG2_PB_SVrefine2Falcon2Bionano_3036:HG2_Ill_SVrefine2DISCOVARplusDovetail_10575:HG3_PB_SVrefine2PBcRDovetail_2817:HG4_Ill_GATKHC_10262;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7991:HG2_Ill_250bpfermikitraw_8518:HG2_Ill_GATKHCSBGrefine_4254:HG2_Ill_GATKHC_10149:HG2_Ill_Krunchall_8701:HG2_Ill_SpiralSDKrefine_13884:HG2_Ill_scalpel_5979:HG3_Ill_Spiral_6680:HG4_Ill_150bpfermikitraw_8224:HG4_Ill_GATKHCSBGrefine_4325:HG4_Ill_GATKHC_10263;NumExactMatchSVs=11;ClusterMaxShiftDist=0.340909;ClusterMaxSizeDiff=0.340909;ClusterMaxEditDist=0.340909;PBcalls=14;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=100;DistBack=-1;DistForward=15325;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=162;REFWIDENED=5:116360457-116360618;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:1:17:0:19:./.:0:0:0:0:1/1:0:22:./.:.:.:.:.:.
chr5	117309153	HG2_PB_SVrefine2PB10Xhap12_4441	G	GGCACACTGGTGCAAGAGGCGGGCCCCTATGGCCTTGGGAAGCTTTACTCCTGTGTCTTTTCCACACTGAGATTGCAAGTTGCTGATTGCTGTACCATTCTGGGGTCTGAAGTTCCCACAGCTCCACTAGGCACTGCCCTAGTTGGAATTCTGTGTGGAGACTCCAACCTCACATTTCTT	20	PASS	ClusterIDs=HG2_PB_HySA_11334:HG2_PB_pbsv_6094:HG4_PB_HySA_9074:HG4_PB_pbsv_6118:HG3_PB_HySA_9398:HG3_PB_pbsv_5918:HG2_PB_PB10Xdip_22943:HG3_PB_SVrefine2PBcRDovetail_2819:HG3_Ill_SVrefine2DISCOVARDovetail_4601:HG3_Ill_MetaSV_4265:HG2_PB_SVrefine2PBcRplusDovetail_9074:HG2_PB_SVrefine2PB10Xhap12_4441:HG2_PB_SVrefine2Falcon2Bionano_3038:HG2_PB_SVrefine2Falcon1plusDovetail_9726:HG2_Ill_SVrefine2DISCOVARplusDovetail_10581:HG2_10X_SVrefine210Xhap12_4466:HG3_PB_SVrefine2Falcon1Dovetail_3793;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4466:HG2_Ill_SVrefine2DISCOVARplusDovetail_10581:HG2_PB_SVrefine2Falcon1plusDovetail_9726:HG2_PB_SVrefine2Falcon2Bionano_3038:HG2_PB_SVrefine2PB10Xhap12_4441:HG2_PB_SVrefine2PBcRplusDovetail_9074:HG3_Ill_MetaSV_4265:HG3_Ill_SVrefine2DISCOVARDovetail_4601:HG3_PB_SVrefine2PBcRDovetail_2819;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0653951;ClusterMaxSizeDiff=0.0543478;ClusterMaxEditDist=0.291105;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=179;DistBack=2166;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=177;REFWIDENED=5:117309154-117309330;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:1/1:1:27:0:19:./.:0:0:0:0:1/1:1:26:./.:.:.:.:.:.
chr5	118073356	HG2_PB_pbsv_6099	C	CATTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTTTTCCTTTCTTTCTTCTTT	20	PASS	ClusterIDs=HG2_Ill_Krunchall_8715:HG2_PB_pbsv_6099:HG2_PB_HySA_11341;NumClusterSVs=3;ExactMatchIDs=HG2_PB_pbsv_6099;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.190476;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=27629;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=138;REFWIDENED=5:118073342-118073479;PctSeqSimilarity=0.9174;PctSizeSimilarity=0.9434;PctRecOverlap=0.8302;SizeDiff=3;StartDistance=8;EndDistance=8;GTMatch=1;TruScore=89;MatchId=4471.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:31:./.:1:2:8:17:./.:0:0:0:0:0/1:22:25:./.:.:.:.:.:.
chr5	118459436	HG4_PB_SVrefine2Falcon1Dovetail_3701	T	TTGCCTTGGCCTCCCAAAATGCTGGGACATTACCAGCATGAGCCACCATGCCCAACCTCTAAAAGTAGTATTTTATAATTATCGTATAGTTCTTAAAATCTTTGTGTTTGGTACTTGATCTTTGGAGCCAATTCCATAAAGAGGGCAGAAATATGTAAAAGTTATTACTGGGAGAATTAAGAAACTTATCTCTGTAGTCAAATATGTGCTATTAGACTAAGAGATCTAGAATATCTGGGTCTGCCTATGAATTTGAAGATTTAAGTACTTATTATTTTTGAGATGAGGAATCACTCCCATTACCCACGTTGGAGTGCAGTAGCACAAACATGGTTCACTGCAACCTCGGCTTCCCAAGGCCAGGTGATTCTCGCATCTCAGCCTCCCAAGTAGCTGGGACTACTTGGTGCATATGACCATGCCAGCTAATTGTTTGTATTTTCAGTAGGTACTCAGTTTCACCATGTTTCTAGGCTGGTCTCGAACTCCTGGGCTCAAGAATTCCACCTGCCTTGGCCTCCTAAAGTGTTGAGATTACAGGCATGAGCCACTGTACCTAGCCAGGACTTATTATTTTAGTATTTTTTTTTTATTATACCTTAAGTTCTAGGTTACATGTGCACAACGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTTGTCATTTACATTAGGTATATCTCCTAATGCTGTCCCTCTCCCCTTGCCCCACCCACAACAGGCCCCGGTACGTGATGTTCCCCTTCCTGTGTCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGAGAGAACATGTGGTGTTTGGTTTTTTGTCCTTGCAATAGTTTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCCACAGAGGACATGAACTCATCCTTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTTATCCAGTCTATCACTGATGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAGTAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATATTCCCTTGGGTATATACCCAGTAATGGGATGACTGGGTCAAATGGTATTTCTAGTTCTAGATCCTCGAGGAATCGCCACACTGTCTTCCACAGTGGTTGAACTAGTTTACATTCCCACCAACAATGTAAAAGTGTTCCTGTTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGATGTGAGGTGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGACGAGCATTTTTTCATGTGTCTGTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATGCTTCACCCACTTTTTGATGGGGTTGTTTGTTTTTTGCTTGTAAATTTGTGTGAGTTCTTTGTAGAGTCTGGATATTAGCCCTTTGTCAGATGAGTAGATTGCAAAAATTTTCTCCCATTCTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTTGTCAATTTTGTCTTTTGTTGCTGTTGCTTTTGGTGTTTTAGACATGCCTTCCCATGCCTATGTCCTGAATGGTATTGTCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACATTTAAGTCTTTAATCCATCTGAATTAATTTTTGTATAACGTATAAGGAAGGGATCCAGTTTCACTTTCTACATATGGCTAGCCAGTTTTCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTTCTTGTTTTTGTCAGGTTTGTCAAAGATCAGATGGTTGTAGATGTATGGTATTATTTCTGAGGGCTCTGTTCTGTTCCATTGTCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGTAGCGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGACTGACTTGGCGATGCGGGCTCTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTATAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTATCCATGAGCATAGAATCTTCCTTTGTTTGGCCTCTTATTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATGTGAATGGGAGTTCACTCATGATTTAGCTCTCTGTTGTCTGTTATTGGTGTATAAGAATGCTTGTGATTTTTGCACATTGATTTTATATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGTTTTCTAGTATACAATCATGTCATCTGCAAAGAGGGACAATTTGATTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGTCCATTCAGTATGATATGGCTGTGGGTTTGTCGTAAATAGCTCTATTATTTTGAGATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGCTGTTGAATTTTGTCAAAGGCCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCATTGGTTCTGTTTATGTGACTGGATTACATTTATTGATTTGCATATGTTGAACAGCCTTGCATCCCAGGGATGAAGCCACTTGATCGTGGTGGATAAGCATGTGCTGCTGGATTTGGTTTGCCAGTATTTTATTGAGGATTTTTGCATAATGTTCATCAGGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCAGGCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTTACGGAGGATTCCCTTTTTCTATCAATTGAATAGTTTCAGAAGGAATGGTACCAGCTCCTCCTTGTACCTCTGGTAGAATTTGGCTCTGAATCTGTCTGGTCCTAGACTTTTTTTGATTGGTAGGCTATTAATTATTGCCTCAATTTCAGAGCCTGTTACTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGGGTGTATGTCCAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGTAGTTTGTATTTCTGTGGGATCAGTGGTGATATCCCCTTTATCATTTTTTATTGCGTCTCTTTGATTCTTCTCTCTTTTCTTCTTTATTAGTCTTGCTAGTGTTATCAATTTTGTTGATATTTTAAAAAACCAGCTCCTGGATTCATTGATTTTTGAAGGGTTTTTTGTGTCTCTGTCTCCTTCAGTTCTGCTCTGATCTTAGTTATTTCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTCTAGTTCTTTTAATTGGATCGTAGGATGTCATTTTAGATCTCTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGTTGTGTCTTTGTTCTCATTGGTTTCAAAGAACATCTTCTTTGTGCCTTCATTTCGTTTTGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGTTTTGAGTGAGTTTCTTAATCCTGATTCTAGTTTGATTGCACTGTGGTCTGAGAGACAGTTTGTTATAATTTATGTGCTTTTACACTTGCAGAGGAGGCTTTACTTCCAACTGTGTGGTCATTTTTGGAACAAGTGTGATGTGGTGCTGAGAAGAATGTATATTCTGTTGATTTGGGGTGGCAAGTTCTGTAGATGTCTGTTAGGTCCGCTTGGTTCAGAGCTGAGTTACAATTCCTGGGTATCCTTGTTAACTTTCTGTTTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTATTGTGTGGGAGTCTAAGTCTCTTTGTAGGTCTCTAAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATAGGGTGCATATATATTTAGATAGTTAGCTCTTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCTTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTGTTTTCTATTTGCTTGGTAGATCTCCTCCATCCCTTTATTTTGTGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATATAGCACACTCACGGGTCTTGACTCTTTATGCAATTTGCCAGTCTGTGTCTTTTAACTGGAGCATTTAGCCCATTTACATTTAAGGTTAATATTGTTATGTGTGACTTTGATCCTGTCATTATGATGTTGGCTGGTTATTTTGCTTGTTAGTTGATGCAGTTTCTTCCTAGCATTGATGGTCTTTACAATTTGGCATGTTTTTGTATTGGCTGGTACTTGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTGTGGGTTGAAATTTCTTTTCTTTAAGAATGTTGAATATTGGCCCCTACTCTCTTCTGGCTTGTAGAGTTTCTGCCGAGAGATTAGCTGTTAGTCTGATGGGCTTCCCTTTGTAGGTAACCTGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCGTTTCAACTTTGGTGAATCTGATGATTATGTGTCTTGGGGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAATGTTGTCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAGTATTCTGCAGAGTGTTTTCCAACTTGATTCCATTCTCCCCGTCACTTTCAGGTACAGCAGTCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGTTCGTTTCTTTTTACTCTTGTTTTCTAAACTTCTCTTCTCACTTCATTTCATTCATTTGATCTTCAGTCACTGATACCCTTTCTTCCAGTTGATCAAATCGGCTACTGAAGCTTGTGCATTCATCAAGTAGTTCTCGTGCCATGGTTTTGAGCTCCATCAGGTCATTTAAGGACTTCTCTTCATTGGTTATTCTAGTTAGCCATTCGTGTAATCTTTTTTCAAGTTTTTAACTTCTTTGTGATGGGTTTGTGATCGTCTGAAGCCTTCTGTCAACTCGTCAAAGTCGTTCTCTGTCCAGCTTTGTTCCGTTGCGTTTTTTTCAAGGTAGATAAAACCACAAAGATGGGGAAGAAACAGAGCAGAAAAGCTGAAAATTCTAAAAATCAGAGCGCCTCTGGCGAGGAGCTGCATTCCTTTGGAGGGGAGATGCGCTCTGATTTTTAGAATTTTCAGCTTTTCTGCTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACCTTTGGTCTTTGATGATGGTGACGTACTGATGAGGTTTTGGTGTGGATGTCCTTTCTGTTTGTTAGTTTTCCTTCTAACAGTCAGGACCCTCAGCTGCAGGTCTGTTGGAGTTTGCTGCAGGTCCCCTCCAGACCCTGTTTGACTGGGTATCAGCAGCGGAGGCTGCAGAACAGTGAGTACTGCTGAACAGCAAATGTTGCTGCCTGATCGTTCCTTTGAAAGCTTCGTCTCAGAGGGGTACCCGGCCCTGTGAGGTATCAGTCTGGCCCTACTGGGTGGTGTCTCCTAGTTAGGCTACTCGGGAATCAGTGACCCACTTGAGGAGGCTGTCTGTCCATTCTGAGATCTCAAACTCTGTGCTGGGAGAACCATTACTCTCTTCAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAGGTTTCTGCTGCCTTTTGTTCAGCTATGCCCTGCCCCCAGAGGTGCAGTCTATAGAGGCAGGCAGGCCTCCGTGAGCTGAGGTGGGCTCCACCCGGTTCGTGCTTCCCAGCTGCTTTGTTTACCTACTCAAGCCTCAGCAATGGCGATGCCCCTCCCCCAGCCTTGCTGCGGCCTTGCAGTTCAATCTCAGACTGCTGTGCTAGCAATGAGCGAAGCTCCTTGGGTGTGGGACCGACCCTCTGAGCCAGGTGTGGGATATAATCTCCTGGTGTGCTATTTGCTAAGACCTTTGGAAAAGCGTGTTAGTAAGGTGGGAGTGACCCGATTTTCCACATGCTGTCTGTCACGGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCACTTCCTGGGTGAGGTGATGCCTCACCCTGCTTTGGCTCACGCTCGGTGGGCTGCACCCATTGTCCTGCCCCCACTGTCTGACAAGCCCCCGTGAGATGAACCCGGTACGTCAGTTGGAAATGCAGAAATCACCCGTCTTCTGTGTTGCTCACGCTGGGAGCTATAGACTGGAGTTGTTCCTATTTGGCCATCTTGGAACCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCGCCCAGGTTGGAGTGCAGTGGGCCATTCTCCGCTCACTGCAAGCTCAGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCGTCATTAGCTGGGATTACAAGCACCTGCCACCACGCCGGGCTAATTTTTTTGTATTGTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTTGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGTGTGAGCCACTGCACTCGGCCTTTTTTGGACAGAGTCTTGCTGCATTGCCCAGGCTGGAATGCAGTGGTGCGATCTTGGCTTACTGCAACCTCCATCTCTCAGGGTCAAGCGATTCTCATGCCTCAGCCTCCCAAGAAGCTGGGTTACAGGAATGTGCCACCGTGCCCAGCTAATTTTGGCATTTTTATAGAGACGGGTTTTCGCCATGTTGGCCAGGCTGATACTGAACTCTAGGCCTCAAGCATTCTGTCCGCCTCGAGTAAATAATTTTTATGAGTATAAAAACTAGTTGTCACAATTGAAGCATTTAAAGTAGAGCCTGGAATATTACTTGAGGAAAACATTAAAGGCAATATTTGCATAAGGCGTTATTTGCACAAAAAGTGAAAAGTGAAAGCCTCGTTTCACCTCTCCTCCAGCTTTGTCCCTCTCCCTAGAAGACAGCCACTAACAACTATTGATGAATTTTTGTTTATTATGGAATATTCTTTTTTTTTTGAGATGGACTCTTGCTCTGTTGCCCAGGCTGCAGTGCAGTGGTGTGATCTCAGCTCATAGCAACCTCCGCCTCCTGGGTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCAGCTAATTTTTTATATTTTTGGTAGAGACCAGGTTTCACCATGTTGGCCAAGCTGGTCTCAAACTCCTGACCTTGTGATCCGCC	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_4510:HG4_PB_pbsv_6126:HG2_PB_HySA_11344:HG2_PB_pbsv_6101:HG2_PB_assemblyticsPBcR_21115:HG3_PB_pbsv_5925:HG4_PB_assemblyticsfalcon_21339:HG3_PB_HySA_9407:HG3_PB_SVrefine2Falcon1Dovetail_3797:HG2_PB_SVrefine2Falcon1plusDovetail_9733:HG3_PB_SVrefine2PBcRDovetail_2821:HG2_PB_SVrefine2PB10Xhap12_4446:HG3_Ill_SVrefine2DISCOVARDovetail_4608:HG2_PB_SVrefine2PBcRplusDovetail_9080:HG4_PB_SVrefine2Falcon1Dovetail_3701:HG2_PB_SVrefine2Falcon2Bionano_3044:HG4_PB_SVrefine2PBcRDovetail_3052:HG2_PB_PB10Xdip_22989;NumClusterSVs=18;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_3701;NumExactMatchSVs=1;ClusterMaxShiftDist=0.231951;ClusterMaxSizeDiff=0.231951;ClusterMaxEditDist=0.268582;PBcalls=16;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=7739;DistBack=34;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=5:118459437-118459462;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.9942;PctRecOverlap=0.9941;SizeDiff=-45;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=99;MatchId=4472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:109:1/1:0:33:0:29:./.:0:0:0:0:1/1:0:33:1/1:0:952:.:7738:.
chr5	119465635	HG2_PB_assemblyticsPBcR_21125	CTAGTTCTTT	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGTTCACGCCATTCTCCTGCTCAGCCTCCAAGTAGCTGGACTACAGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCTTGACTCGTGATCCGCCGCCTCGGCCTCCCAAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9737:HG2_PB_PB10Xdip_22993:HG2_PB_SVrefine2PB10Xhap12_4451:HG2_PB_assemblyticsPBcR_21125:HG4_PB_pbsv_6131:HG2_PB_pbsv_6106:HG2_10X_SVrefine210Xhap12_4477:HG2_PB_SVrefine2PBcRplusDovetail_9085;NumClusterSVs=8;ExactMatchIDs=HG2_PB_assemblyticsPBcR_21125;NumExactMatchSVs=1;ClusterMaxShiftDist=0.219474;ClusterMaxSizeDiff=0.219474;ClusterMaxEditDist=0.242991;PBcalls=7;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=301;DistBack=-10;DistForward=1;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:119465645-119465634;PctSeqSimilarity=0.947;PctSizeSimilarity=0.8958;PctRecOverlap=0.9199;SizeDiff=-35;StartDistance=2;EndDistance=11;GTMatch=0;TruScore=92;MatchId=4473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:16:0|1:29:0:0:16:./.:0:0:0:0:0/1:27:6:0/1:10:10:.:.:.
chr5	120975480	HG3_Ill_SVrefine2DISCOVARDovetail_4614	T	TTATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3052:HG2_Ill_GATKHC_10200:HG3_PB_pbsv_5940:HG3_Ill_GATKHC_10179:HG3_Ill_GATKHCSBGrefine_4140:HG2_PB_pbsv_6113:HG3_PB_SVrefine2Falcon1Dovetail_3806:HG3_PB_HySA_9428:HG3_Ill_Spiral_6728:HG3_Ill_SVrefine2DISCOVARDovetail_4614:HG3_Ill_GATKHC_10178:HG3_Ill_GATKHCSBGrefine_4139:HG2_Ill_GATKHCSBGrefine_4272:HG3_PB_SVrefine2PBcRDovetail_2827;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4272:HG3_Ill_GATKHCSBGrefine_4139:HG3_Ill_GATKHC_10178:HG3_Ill_SVrefine2DISCOVARDovetail_4614:HG3_Ill_Spiral_6728;NumExactMatchSVs=5;ClusterMaxShiftDist=0.230089;ClusterMaxSizeDiff=0.230089;ClusterMaxEditDist=0.265487;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=40059;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=9;REFWIDENED=5:120975479-120975490;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4474.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:0|1:34:2:1:24:./.:0:0:0:0:0/1:20:9:./.:.:.:.:.:.
chr5	122431831	HG2_PB_SVrefine2PBcRplusDovetail_9092	G	GTATTTATGAATAATTGTTATTCATAAATAATTTTTTACGTTTGTGAGAGATACTTTCATATGCTCTAAGCAACACACTTTGAAATGCCATTTTAGCATTAGGTGTCTCTTATATTACCTAATGCTAAAATGGCATTTCAAAGTGTGTTGCTTAGAGCATATGAAAGTATCTCTCACAAACGTAAAAAAT	20	PASS	ClusterIDs=HG2_PB_HySA_11381:HG4_PB_pbsv_6143:HG2_PB_pbsv_6121:HG3_PB_pbsv_5947:HG4_PB_assemblyticsfalcon_21377:HG3_PB_assemblyticsfalcon_21825:HG2_PB_assemblyticsPBcR_21154:HG2_PB_PB10Xdip_23195:HG2_Ill_breakscan11_3608:HG3_PB_HySA_9437:HG4_PB_SVrefine2PBcRDovetail_3063:HG4_PB_SVrefine2Falcon1Dovetail_3710:HG4_Ill_manta_1536:HG4_Ill_SVrefine2DISCOVARDovetail_4531:HG4_Ill_MetaSV_4258:HG4_Ill_GATKHCSBGrefine_4350:HG3_PB_SVrefine2PBcRDovetail_2829:HG3_PB_SVrefine2Falcon1Dovetail_3812:HG3_Ill_manta_1457:HG3_Ill_Spiral_6732:HG3_Ill_SVrefine2DISCOVARDovetail_4622:HG3_Ill_MetaSV_4275:HG3_Ill_GATKHCSBGrefine_4147:HG2_PB_SVrefine2PBcRplusDovetail_9092:HG2_PB_SVrefine2PB10Xhap12_4463:HG2_PB_SVrefine2Falcon2Bionano_3055:HG2_PB_SVrefine2Falcon1plusDovetail_9746:HG2_Ill_manta_1764:HG2_Ill_SVrefine2DISCOVARplusDovetail_10604:HG2_Ill_MetaSV_4100:HG2_Ill_GATKHCSBGrefine_4279:HG2_10X_SVrefine210Xhap12_4491:HG2_PB_assemblyticsfalcon_21900;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4279:HG2_Ill_MetaSV_4100:HG2_Ill_SVrefine2DISCOVARplusDovetail_10604:HG2_Ill_manta_1764:HG2_PB_SVrefine2Falcon1plusDovetail_9746:HG2_PB_SVrefine2Falcon2Bionano_3055:HG2_PB_SVrefine2PB10Xhap12_4463:HG2_PB_SVrefine2PBcRplusDovetail_9092:HG3_Ill_GATKHCSBGrefine_4147:HG3_Ill_MetaSV_4275:HG3_Ill_SVrefine2DISCOVARDovetail_4622:HG3_Ill_Spiral_6732:HG3_Ill_manta_1457:HG3_PB_SVrefine2Falcon1Dovetail_3812:HG3_PB_SVrefine2PBcRDovetail_2829:HG4_Ill_GATKHCSBGrefine_4350:HG4_Ill_MetaSV_4258:HG4_Ill_SVrefine2DISCOVARDovetail_4531:HG4_Ill_manta_1536:HG4_PB_SVrefine2Falcon1Dovetail_3710:HG4_PB_SVrefine2PBcRDovetail_3063;NumExactMatchSVs=21;ClusterMaxShiftDist=0.213333;ClusterMaxSizeDiff=0.175532;ClusterMaxEditDist=0.341333;PBcalls=18;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=189;DistBack=6943;DistForward=16646;DistMin=6943;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=5:122431832-122431844;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:71:1/1:2:35:2:32:./.:0:0:0:0:0/1:12:30:./.:.:.:.:.:.
chr5	123880540	HG2_Ill_breakscan11_3609	C	CAAGGCTGAACTGATTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_11391:HG2_PB_pbsv_6124:HG2_Ill_breakscan11_3609:HG2_PB_SVrefine2Falcon1plusDovetail_9747;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_breakscan11_3609;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0431894;ClusterMaxSizeDiff=0.0398671;ClusterMaxEditDist=0.10299;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=298;DistBack=-424246;DistForward=-1;DistMin=-424246;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:123880541-123880554;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9835;PctRecOverlap=0.9868;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4476.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:49:0|1:24:4:0:28:./.:0:0:0:0:0/1:19:12:./.:.:.:.:.:.
chr5	124171321	HG2_PB_HySA_11394	A	AAATCCCTTTGGAGGCCGAGGCGGGCGATCACGAGGTCAGAGATCGAGACATCCGGCTAAAACGGTGAAACCCGCTCTACTAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3610:HG2_PB_pbsv_6125:HG2_PB_HySA_11394:HG4_PB_pbsv_6149;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_11394;NumExactMatchSVs=1;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.223048;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=125;DistBack=31540;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:124171322-124171322;PctSeqSimilarity=0.9306;PctSizeSimilarity=0.8741;PctRecOverlap=0.8741;SizeDiff=-18;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=89;MatchId=4477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:35:0|1:29:0:2:33:./.:0:0:0:0:0/1:21:6:./.:.:.:.:.:.
chr5	125040041	HG3_Ill_MetaSV_4279	T	TAAAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAATCAACAAAAAAAACTAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3613:HG2_PB_pbsv_6131:HG3_PB_pbsv_5953:HG2_PB_PB10Xdip_23205:HG2_PB_SVrefine2Falcon1plusDovetail_9752:HG4_PB_assemblyticsfalcon_21398:HG3_Ill_MetaSV_4279:HG2_PB_assemblyticsPBcR_21177:HG3_PB_assemblyticsfalcon_21843:HG3_PB_HySA_9454:HG3_Ill_GATKHCSBGrefine_4154:HG2_PB_SVrefine2PB10Xhap12_4469:HG2_PB_SVrefine2PBcRplusDovetail_9096:HG3_PB_SVrefine2Falcon1Dovetail_3816:HG4_PB_SVrefine2Falcon1Dovetail_3715:HG2_PB_HySA_11407;NumClusterSVs=16;ExactMatchIDs=HG3_Ill_MetaSV_4279;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0932584;ClusterMaxSizeDiff=0.0932584;ClusterMaxEditDist=0.187709;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=930;DistBack=183;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=5:125040042-125040045;PctSeqSimilarity=0.9611;PctSizeSimilarity=0.929;PctRecOverlap=0.9291;SizeDiff=66;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=93;MatchId=4478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:55:./.:7:24:16:13:./.:0:0:0:0:0/1:27:15:0/1:42:140:.:.:.
chr5	126065120	HG2_PB_HySA_11424	C	CAAAAAAAATAAATGGCCGCTCCCCTCTCCCCTCTCCCTCTCTCCCTCTCCCTCTCCCTCTCGGTCTCCCTCTCCCTCTCTTTCCACTGTCTCCCTCTGATGCCGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCGCCACCACGCCTGACTGGTTTTCGTACTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTTGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCGCTACAACCTCCATCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCACCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGACGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGCAAGTGAGGAGCGTCTCTGACCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCGGCAGCCATCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCGTCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGCGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCAGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCCGCCCAGCATCCGCCCCATCTGAGAAGTGAGGAGCCCTCCGCCCGGCAGCCGCCCCGTCTGAGAAGTGAGGAGTCCCTCTGCCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCACCGGCAGCCGCCCCGTCCGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCACCCCATCCAGGAGGGAGGTGGGGAGTCAGCCCCCCACCTGGCCAGACGCCCCGTCCGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCAGCCGCCCCGTACAGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCACGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCTCTGCCCAGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGCGCCCTCTGCCCAGCCGCCCTACTGGGAAGTGAGGAGCCCCTCTGCGGGCCAGCCACCCCGTCCGGGAGGGAGTGGGGGGCGCAGACCCCCGCCCGGCAGCCGACCCGTCCGGGAGGGAGGTGGGGGCGCAGACCCCCGCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCTCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCTCCCCGCCCGGCCAGCCGCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGCCGCCCCTACTGGAAGTGAGGAGCCCTCTGCCCAGCCAGCCCCCCGTCCGGAGAGGAGGTGGGGGGGTCAGCCCCCGCCGCAGCCGCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTATAGGAAGTGAGGAGCCCCTCTGCCCAGCCACCACTCGTTCTGGGGGTGTACCAGCAGCTCATTGAGAACGGGCGGGATGACAATGGCGGTTTTGTGGAATAGAAAGGGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTTGCCGTGTCTGTGTAGAAAGAGTAGACATGGGAGACTTTTCATTTTTGTTCTGTACTAAGATAAATTCTTCTGCCTTGGGATCCTGTTGATCGGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAATCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAACACTGCGGAAGGCGGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAGAATGATCAATAAAAAAAATAAAAATTAAAAAAAATAAAAAAAAAGTTAAAAAAAAATAAAAATAAAAAAATAAAAATAAAAAAAATAAATAAATAAAAAAATAAATAAATA	10	PASS	ClusterIDs=HG2_PB_HySA_11424:HG2_PB_assemblyticsfalcon_21926:HG3_PB_pbsv_5956:HG2_PB_PB10Xdip_23222:HG2_PB_SVrefine2PB10Xhap12_4473:HG2_PB_SVrefine2PBcRplusDovetail_9099:HG3_PB_assemblyticsfalcon_21849:HG3_PB_SVrefine2Falcon1Dovetail_3819:HG2_PB_SVrefine2Falcon1plusDovetail_9755;NumClusterSVs=9;ExactMatchIDs=HG2_PB_HySA_11424;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0364501;ClusterMaxSizeDiff=0.0364501;ClusterMaxEditDist=0.162758;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2533;DistBack=17149;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:126065121-126065136;PctSeqSimilarity=0.9881;PctSizeSimilarity=0.9848;PctRecOverlap=0.9845;SizeDiff=-39;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=4479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:29:0|1:19:0:0:23:./.:0:0:0:0:0/1:26:14:0/1:85:182:.:3038:.
chr5	126073867	HG2_PB_pbsv_6133	C	CCGCCGAATAGTGTACTTGTACCCATTAAGTGACTTCTCAATCGTTCCTCCCCTCCACCTCCAGTCTTCCAACCTCCACTCAAAGGGATCAAAGTGAGGTTTTGCTACATGGATATATTGTCTGGTGCTTTTAATGTAACATCCCCGAATAGTGTACTTGTACCCTGTAAGTGACTTCTATCAGTTCCCCCCCTTCCCAACCCTCCCAGTCTCCACCCTCCAACTCAAGGGATAACAAGTGAAGGTTTTGCTACATGGAATATATTGTCTGGGCTTTTAAATGTAACCATCCACCCGAATAGTGTAAACTTGTCATTAAGTGACTTCTCATCGTTCCTCCCCTTCCCACCCTCCAGTCTTCCAACCTCCAACTCAAGGGATAGTGAGGTTTGCTACATGGATCATATTGTCTGGGCTTTTAATGTAAACATCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9756:HG3_PB_pbsv_5958:HG2_PB_pbsv_6133:HG2_PB_SVrefine2PB10Xhap12_4474:HG2_PB_PB10Xdip_23223;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_6133;NumExactMatchSVs=1;ClusterMaxShiftDist=0.192831;ClusterMaxSizeDiff=0.190358;ClusterMaxEditDist=0.262829;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=432;DistBack=-80;DistForward=375;DistMin=-80;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=412;REFWIDENED=5:126073800-126074211;PctSeqSimilarity=0.9531;PctSizeSimilarity=0.9796;PctRecOverlap=0.9433;SizeDiff=-9;StartDistance=21;EndDistance=21;GTMatch=0;TruScore=95;MatchId=4480.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:./.:20:7:5:12:./.:0:0:0:0:0/0:44:0:0/1:9:5:.:3038:.
chr5	126771837	HG4_PB_SVrefine2PBcRDovetail_3069	T	TTCATTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGTTTCCTTGTATTTTGAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGGGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATAATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTGGTTGGTAAACTATTGATTATTGCCACAATTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGGTTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCATCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCTTGTATTTTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3614:HG2_PB_SVrefine2Falcon2Bionano_3062:HG2_PB_SVrefine2PBcRplusDovetail_9103:HG3_PB_SVrefine2Falcon1Dovetail_3821:HG4_PB_SVrefine2PBcRDovetail_3069:HG2_PB_SVrefine2Falcon1plusDovetail_9760:HG4_PB_SVrefine2Falcon1Dovetail_3719;NumClusterSVs=7;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_3069;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0147372;ClusterMaxSizeDiff=0.0137547;ClusterMaxEditDist=0.0224719;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=6139;DistBack=1209;DistForward=32512;DistMin=1209;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=5:126771838-126771845;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9992;PctRecOverlap=0.999;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:44:1|0:7:33:26:0:./.:0:0:0:0:0/1:25:8:0/1:227:768:.:6187:.
chr5	130853241	HG4_Ill_GATKHCSBGrefine_4376	T	TAAAAAATCTCTCAAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_Ill_MetaSV_4268:HG4_PB_pbsv_6171:HG2_PB_pbsv_6149:HG2_Ill_breakscan11_3615:HG3_PB_pbsv_5978:HG3_PB_SVrefine2Falcon1Dovetail_3832:HG2_PB_HySA_11460:HG4_Ill_GATKHCSBGrefine_4376:HG4_PB_SVrefine2Falcon1Dovetail_3727;NumClusterSVs=9;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_4376;NumExactMatchSVs=1;ClusterMaxShiftDist=0.148936;ClusterMaxSizeDiff=0.145897;ClusterMaxEditDist=0.261119;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=331;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=5:130853242-130853258;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4482.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:44:0|1:36:0:0:28:./.:0:0:0:0:0/1:26:9:0/1:9:41:.:.:.
chr5	131544116	HG2_PB_PB10Xdip_23277	G	AGGGGAGGGGGGAGGGGAGGGGAGGGGAGGGGAGGGGGAGGGGAGGGGGAGGGGAGAGGGGAGGGGAGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3070:HG2_PB_PB10Xdip_23277:HG2_PB_HySA_11462:HG4_PB_pbsv_6174:HG2_PB_pbsv_6152;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_23277;NumExactMatchSVs=1;ClusterMaxShiftDist=0.246914;ClusterMaxSizeDiff=0.246914;ClusterMaxEditDist=0.322981;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=70;DistBack=0;DistForward=72416;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=5:131544114-131544117;PctSeqSimilarity=0.9648;PctSizeSimilarity=0.9429;PctRecOverlap=0.9437;SizeDiff=4;StartDistance=2;EndDistance=2;GTMatch=1;TruScore=95;MatchId=4483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:52:1/1:1:8:1:9:./.:0:0:0:0:./.:1:1:./.:.:.:.:.:.
chr5	133568618	HG4_Ill_150bpfermikitraw_8349	A	AGAGGCTGGTGGGACAGCACAGAGACCTGGTATCTGTCAGGGCAGAGGGGTGTGAATG	20	PASS	ClusterIDs=HG2_PB_HySA_11477:HG3_PB_pbsv_5985:HG2_PB_pbsv_6155:HG4_PB_pbsv_6183:HG4_PB_SVrefine2PBcRDovetail_3084:HG2_PB_PB10Xdip_23286:HG2_PB_assemblyticsfalcon_21968:HG2_Ill_breakscan11_3616:HG4_PB_SVrefine2Falcon1Dovetail_3732:HG4_Ill_svaba_8047:HG4_Ill_manta_1553:HG4_Ill_SVrefine2DISCOVARDovetail_4572:HG4_Ill_Krunchall_9155:HG4_Ill_GATKHC_10406:HG4_Ill_GATKHCSBGrefine_4383:HG4_Ill_Cortex_3003:HG4_Ill_250bpfermikitraw_8729:HG4_Ill_150bpfermikitraw_8349:HG3_PB_SVrefine2Falcon1Dovetail_3836:HG3_Ill_svaba_8037:HG3_Ill_manta_1473:HG3_Ill_Spiral_6800:HG3_Ill_Krunchall_8636:HG3_Ill_GATKHC_10284:HG3_Ill_GATKHCSBGrefine_4183:HG3_Ill_Cortex_3020:HG3_Ill_250bpfermikitraw_8365:HG3_Ill_150bpfermikitraw_8178:HG2_PB_SVrefine2PBcRplusDovetail_9116:HG2_PB_SVrefine2PB10Xhap12_4495:HG2_PB_SVrefine2Falcon2Bionano_3073:HG2_PB_SVrefine2Falcon1plusDovetail_9775:HG2_Ill_svaba_7941:HG2_Ill_manta_1779:HG2_Ill_SpiralSDKrefine_13972:HG2_Ill_SVrefine2DISCOVARplusDovetail_10644:HG2_Ill_Krunchall_8835:HG2_Ill_GATKHC_10308:HG2_Ill_GATKHCSBGrefine_4303:HG2_Ill_Cortex_7281:HG2_Ill_250bpfermikitraw_8663:HG2_Ill_150bpfermikitraw_8129:HG3_PB_HySA_9519:HG4_PB_HySA_9178;NumClusterSVs=44;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8129:HG2_Ill_250bpfermikitraw_8663:HG2_Ill_Cortex_7281:HG2_Ill_GATKHCSBGrefine_4303:HG2_Ill_GATKHC_10308:HG2_Ill_Krunchall_8835:HG2_Ill_SVrefine2DISCOVARplusDovetail_10644:HG2_Ill_SpiralSDKrefine_13972:HG2_Ill_manta_1779:HG2_Ill_svaba_7941:HG2_PB_SVrefine2Falcon1plusDovetail_9775:HG2_PB_SVrefine2Falcon2Bionano_3073:HG2_PB_SVrefine2PB10Xhap12_4495:HG2_PB_SVrefine2PBcRplusDovetail_9116:HG3_Ill_150bpfermikitraw_8178:HG3_Ill_250bpfermikitraw_8365:HG3_Ill_Cortex_3020:HG3_Ill_GATKHCSBGrefine_4183:HG3_Ill_GATKHC_10284:HG3_Ill_Krunchall_8636:HG3_Ill_Spiral_6800:HG3_Ill_manta_1473:HG3_Ill_svaba_8037:HG3_PB_SVrefine2Falcon1Dovetail_3836:HG4_Ill_150bpfermikitraw_8349:HG4_Ill_250bpfermikitraw_8729:HG4_Ill_Cortex_3003:HG4_Ill_GATKHCSBGrefine_4383:HG4_Ill_GATKHC_10406:HG4_Ill_Krunchall_9155:HG4_Ill_SVrefine2DISCOVARDovetail_4572:HG4_Ill_manta_1553:HG4_Ill_svaba_8047:HG4_PB_SVrefine2Falcon1Dovetail_3732:HG4_PB_SVrefine2PBcRDovetail_3084;NumExactMatchSVs=35;ClusterMaxShiftDist=0.140351;ClusterMaxSizeDiff=0.140351;ClusterMaxEditDist=0.263158;PBcalls=15;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=28;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=2;NumTechsExact=2;SVLEN=57;DistBack=12470;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=5:133568619-133568622;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:./.:0:6:0:2:./.:0:0:0:0:1/1:0:54:./.:.:.:.:.:.
chr5	133762636	HG2_PB_SVrefine2Falcon2Bionano_3074	G	GGTGGCTCACGCCTGTATTCCTAGCACTTTGGGAGGCCAAGGTGGGTGGATCGCCTGAGGTCAGGAGTTCGAGACTAGCCTGGCCAACATGTTGAAACCCCATCTCTACTAAAAATACAAAATTAGCCAGGCATGGTGGCAGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGCAGGCGGAGGTTGCAGTGAGCCGAGATTGCGCCATTGCACTTCAGCCTGGGTGACAGAGCAAGACTCTGTCTCAAAAAAAAAAACCTAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3837:HG2_Ill_breakscan11_3617:HG2_PB_pbsv_6156:HG2_PB_PB10Xdip_23287:HG3_PB_SVrefine2PBcRDovetail_2847:HG4_PB_SVrefine2PBcRDovetail_3085:HG4_Ill_MetaSV_4272:HG2_Ill_MetaSV_4109:HG4_PB_HySA_9179:HG2_PB_HySA_11478:HG3_PB_HySA_9521:HG4_PB_pbsv_6184:HG3_PB_pbsv_5986:HG4_PB_SVrefine2Falcon1Dovetail_3733:HG2_PB_SVrefine2PBcRplusDovetail_9117:HG2_PB_SVrefine2PB10Xhap12_4496:HG2_PB_SVrefine2Falcon2Bionano_3074:HG2_PB_SVrefine2Falcon1plusDovetail_9776;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9776:HG2_PB_SVrefine2Falcon2Bionano_3074:HG2_PB_SVrefine2PB10Xhap12_4496:HG2_PB_SVrefine2PBcRplusDovetail_9117:HG4_PB_SVrefine2Falcon1Dovetail_3733;NumExactMatchSVs=5;ClusterMaxShiftDist=0.148867;ClusterMaxSizeDiff=0.148867;ClusterMaxEditDist=0.296053;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=286;DistBack=45989;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=288;REFWIDENED=5:133762637-133762924;PctSeqSimilarity=0.9489;PctSizeSimilarity=0.9286;PctRecOverlap=0.0906;SizeDiff=-22;StartDistance=-270;EndDistance=-270;GTMatch=0;TruScore=65;MatchId=4485.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:12:0:18:./.:0:0:0:0:1/1:0:12:./.:.:.:.:.:.
chr5	133776811	HG2_PB_SVrefine2Falcon2Bionano_3075	CT	GTATGTCTCAACCCTCCCAGGATCTGTGTTGGCACCACTGGGCCTTGTATCAGCCTTAGAAGGCAGGGGCAGGGTAGTCTGTGATCCAGCAGAAAAAGACAAATACCTGACTTGCTCTACGCTGTTGGACACTCACCTCATCTCCTATGAACAGGTTTTTTTCACCTTAAAAATTGGGGACAATGCTCCTTCCAGCTTGCCTCCCAGGGTCCCATGGAGCCCAGTGAGAACCATGGATGTGAGTGTACTGCCAAGGCCAGTCCTGAGGCAGGAGCTGAGCCCACAGCTCTGTCAGGGCAGGAGAGCTTGGCTCGATGTGAAAAGTGCTTTGGGGCTGGGCTCAGTGGCTCACTCTTGTAATCCCAGCACTTTGGGAGGCTGAGATGGGTGGATTACCTGAGGTCAGGAATTTGAGACCAGCCTGGCCAACATAGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCACCTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCACGCCACTGCACTCCAGCCTGGGCGACGGAGTGAGGCTTTGTCTCAAAAAAAAAATTTTATATATATATATAAAATAAAAAAATAAATTTAAAAAAGGGCCAGGTGTGGTGGCTCACACCTGTAATCCCAGCATTTTGGGAGGCCGAGGTGTTGGATCACCTGAGGTCTGGAGTTCAAGATCAGCCTGGCCAACATGGTGAAACCCCAACTCTACTAAAAATACAAAAATTAGCCAGGTGTGCTGGTGGGTGCCTGTAATCCCAGCTACTCATGTGGCTGAGGTGGGAGAATCTCTTGAACCTGGGAGGCAAAGATTGTACTGAGCCGAGACTGCACCATTGCATTCCAGTATGGGGAACAAGAGCGAAACTCCATCTCCAAAAAAAAAGAAAAAAGAAAGAAAAGAAAAAGAAGAAAGAAAATCGCTTTGGGAGAAAAGGTTTTATGCAAATGGCCAATCATGATTAATTGATGGGGAGGCTCTCAGGCAAAGGATCGGATTTCACAGATAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATACATATATACATATAACTTGGCTCTCCTGAGAAGAAAATGTTCATTCAGTGTAAGGCAAGATAGTGTAAGGCAAGTATATCCAAATCAGGGGTGTCCAATCTTTTGGTTTCCCTGGGCCACATTGGAAGAAGAATTGTCTTGGGCCACACATAAAATTTAATAACACTAATGATAGCTGATGAGTTAAAAAAAAAAATCGTAAACCAAATCTCATGTTTTAAGAAAGTTTACGAATTTGTGTTGGGCAGCATTTAAAGCCACCCTGGGCCCAGGCCACAGGTTGGACAAGCCTGATCTAAATCAAGGTTTTCCATCCTTTAAACAGGTACCTTTTCACCATCTCCATTCATTCAGTGAGCATTTTTTGGGCACCTGCTGTATGATAAGCACTGTACCAAGCATTAGGAAACAGAAATAAAGATAGGCAGGCCCTGCTCTCGTGATGTTGGGAAACAAACAAACAGAAAGAGTTTTACCTCAGAGTGTGATAAGCACAGACAGAGGCAAACAAAAGGTGTTCTAGGAGCACCGAGGAGGGGCACTCACCCATGATCCCAGTGTGGCATCAGAGTCCACAGGGCATGTGCAGAGGAAAGTCTGGCGTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3086:HG2_PB_pbsv_6157:HG2_PB_HySA_11479:HG3_PB_pbsv_5987:HG2_PB_SVrefine2PB10Xhap12_4497:HG4_PB_pbsv_6185:HG2_PB_SVrefine2PBcRplusDovetail_9118:HG2_PB_SVrefine2Falcon2Bionano_3075:HG2_Ill_SVrefine2DISCOVARplusDovetail_10645:HG2_PB_assemblyticsfalcon_21971:HG2_PB_SVrefine2Falcon1plusDovetail_9777:HG3_PB_SVrefine2PBcRDovetail_2848:HG3_PB_SVrefine2Falcon1Dovetail_3838:HG4_PB_SVrefine2Falcon1Dovetail_3734:HG2_PB_PB10Xdip_23288:HG3_PB_HySA_9522:HG4_Ill_SVrefine2DISCOVARDovetail_4575;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3075:HG2_PB_SVrefine2PBcRplusDovetail_9118;NumExactMatchSVs=2;ClusterMaxShiftDist=0.151946;ClusterMaxSizeDiff=0.151946;ClusterMaxEditDist=0.245259;PBcalls=15;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1800;DistBack=0;DistForward=5;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:133776813-133776810;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=0.9983;SizeDiff=-1;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=99;MatchId=4486.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:107:1/1:1:38:0:23:./.:0:0:0:0:1/1:0:22:./.:16:282:.:1809:.
chr5	133955020	HG3_PB_SVrefine2Falcon1Dovetail_3839	C	CAAAAAAAAAAAAAACCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCTCTCCCTCTCGTCTCCTCTCCCTCTCCCTCCCTCTCCTCTCCTCTCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCTCTCCTCTCCCTCTCCCTCTCCTCTCCTCTCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCCTTCCCTCTCCCTCTCCCTCTCTCTCCTCTCCCTCTCCCTCTCCCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCTCTCCCTCTCCCTCTCCCTCTCTCCACGGTCTCCTTCCACGGTCTCCCTCTGATGCCGAGCCAAAGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTTTTTTTTTTGGTGGAGACGGGGTTTGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCCCCAAAGTGCCGAGATTGCAGCCTCTGCCCAGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGCCCCCCATCGTCTGGGATATGAGGAGCCTCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAACCCTGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCCTCCGCCCGGCAGCCACCCCGTCTGGAAGTGAGGAGCGTCTCCGCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCGCCGGCCAGCCGCCCCGTCGGGAGGTGAGGGGCCCTCTGCCCGGCCGCCCCTACTGGGAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCGCCGCCCGGCCAGCCGCCCGTCCGGGAGGTGAGGGGCGCTCTGCCCGGCCGCCCTACTGGGAAGTGAGGACCCCTCTGCCGGCCAGCCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCGGGAGGGAGGTGGGGGGGAGCCCCGCCGCCAGCCGCCCCGTCCGGGAGGTGGGGGGTCAGCCCCCGCCTGGCCAGCCGCCTGTCGGGAGGTGAGGGGCGCCTCTGCCGGCCGCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGTGGGGGGGTCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCGCCCGGCCGCCGCCCATCCGGGAGGTGAGGGCGCCTCTGCCCGGGCCCTACTGGGATGAGGACCTGCCCGGCCAGCCGCCCATCCGGGAGGTGGGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCAGCGCTCATTGGGGATGGGCCATGATGACAATGGCGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGTCTGTGTGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTTTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATA	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_21973:HG3_PB_SVrefine2Falcon1Dovetail_3839:HG2_PB_HySA_11481;NumClusterSVs=3;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_3839;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0510622;ClusterMaxSizeDiff=0.0510622;ClusterMaxEditDist=0.069772;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2499;DistBack=15530;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=5:133955021-133955033;PctSeqSimilarity=0.9699;PctSizeSimilarity=0.9455;PctRecOverlap=0.9455;SizeDiff=-144;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4487.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:28:0|1:29:3:2:14:./.:0:4:22:0:0/1:17:3:0/1:92:139:.:2713:.
chr5	134118926	HG2_PB_SVrefine2PBcRplusDovetail_9119	G	GTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAGGGTGGAGTGCAGTGGTGCAATCTCACTGCGCTCACTGTGACCTCGGCCTCCCGGGCTCAAGCAGTTCTCCTGCCTCAGCCTTCCGAGTAGCTGAAACTATAGGTGTGTGCCACCATAGCTGGTTATTTTTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGCGTTGAACTCCTGACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACGGGCATGAGCCACCATGCCTGGCCTTTTTAATTTTTTATTTATTTTTTTCTTTTTTGAGACAGAGCCTCCCGCCCCTGTCCGTCAGGCGTGCATTGGCAGAATCTTGGCTCACTGCAACCTCTGTATCCTGGGTTCAAGCGATTCTCATGCTGTAGCCTCTTAAGTAGCTGGGATTACAGGTACCCTCCACCACACCCACCCAATTTTTGTATTTTTAATAGAGACAGGGTTTTGTCATGTTGGTGAAGCTGGTCCAAACTCCTGACTTCAGGTGATCCCCCCACCTTGGCCTCCCAAAGCGCTGGTTAAATTATACAACTTAGCTGGACGCTGTGGTTCACGCCTGTAATCTCAGCACTTTGGGAGCCAAGAAGGGCAGATCATGATGTTAAGAGATCGAGACCATCCTGGCTGACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTAGTGGCGCATGCCTGTAGTCCCAGCTAGCCTGTAGTCCCAGCTACTCAGGAGCCTGAGGCAGCAGAATCGCTTGAACCTGGGAGGTGAAGGTTGCAGTGAGCTGAGATCATGCCACTGCACGCCAGCCTGGTGACAGAGAGAGACTCTGTCTTTAAAAAAAAAAAAAATTATGCAACTTACGGTTTTTTCTTTTTTCTTTTTTTTTTCTTTTAGGCAGAGTCTCACTCTGTCACCAGGCTGGAGTGTAGTGGCGCAATCCCAGCTCACTGCAACCTTCGCCTCCCGGGTTCAAGCGATTCTCCTACCTCAGCCTCCTGAGTAGCTGAGATTGCAGGAACGCCCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGTCTGACCAATTAATGATTTTTAGTGTATTTTTGTAGTTGTGCAACTATCACAATAGTCTAATTTTTGAAAATTTTTTTGAATTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9778:HG3_PB_pbsv_5988:HG2_PB_pbsv_6158:HG4_PB_pbsv_6186:HG3_PB_HySA_9523:HG2_PB_PB10Xdip_23290:HG4_PB_HySA_9180:HG4_PB_SVrefine2Falcon1Dovetail_3735:HG3_PB_SVrefine2Falcon1Dovetail_3840:HG2_PB_SVrefine2Falcon2Bionano_3076:HG3_PB_SVrefine2PBcRDovetail_2849:HG2_PB_SVrefine2PBcRplusDovetail_9119:HG2_PB_SVrefine2PB10Xhap12_4499:HG4_Ill_SVrefine2DISCOVARDovetail_4577:HG3_Ill_SVrefine2DISCOVARDovetail_4666:HG2_Ill_SVrefine2DISCOVARplusDovetail_10647:HG4_PB_SVrefine2PBcRDovetail_3087;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4499:HG2_PB_SVrefine2PBcRplusDovetail_9119:HG3_PB_SVrefine2PBcRDovetail_2849;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0423163;ClusterMaxSizeDiff=0.0415739;ClusterMaxEditDist=0.186998;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1321;DistBack=155974;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=327;REFWIDENED=5:134118927-134119253;PctSeqSimilarity=0.9854;PctSizeSimilarity=1;PctRecOverlap=0.8107;SizeDiff=0;StartDistance=-250;EndDistance=-250;GTMatch=1;TruScore=93;MatchId=4488.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:81:1/1:0:24:2:15:./.:0:0:0:0:1/1:0:20:./.:18:183:.:.:.
chr5	134609077	HG2_PB_SVrefine2PB10Xhap12_4501	T	TGCCCTCAGGAGAGGAGAGCATTGCTGCTGGGCCCTCAGGAGAGGAGAGCATTGCTGCTGGGCCCTCAGGAGAGGAGAGCATTGCTGCTGGGCCCTCAGGAGAGGAGAGCATTGCTGCTGG	20	PASS	ClusterIDs=HG4_PB_HySA_9182:HG4_PB_pbsv_6187:HG2_PB_HySA_11485:HG2_PB_PB10Xdip_23291:HG2_PB_pbsv_6159:HG4_PB_SVrefine2PBcRDovetail_3089:HG4_PB_SVrefine2Falcon1Dovetail_3737:HG4_Ill_SVrefine2DISCOVARDovetail_4579:HG3_PB_SVrefine2PBcRDovetail_2851:HG3_PB_SVrefine2Falcon1Dovetail_3842:HG3_Ill_SVrefine2DISCOVARDovetail_4671:HG2_PB_SVrefine2PBcRplusDovetail_9121:HG2_PB_SVrefine2PB10Xhap12_4501:HG2_PB_SVrefine2Falcon2Bionano_3078:HG2_PB_SVrefine2Falcon1plusDovetail_9780;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9780:HG2_PB_SVrefine2Falcon2Bionano_3078:HG2_PB_SVrefine2PB10Xhap12_4501:HG2_PB_SVrefine2PBcRplusDovetail_9121:HG3_Ill_SVrefine2DISCOVARDovetail_4671:HG3_PB_SVrefine2Falcon1Dovetail_3842:HG3_PB_SVrefine2PBcRDovetail_2851:HG4_Ill_SVrefine2DISCOVARDovetail_4579:HG4_PB_SVrefine2Falcon1Dovetail_3737:HG4_PB_SVrefine2PBcRDovetail_3089;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0653061;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.2;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=120;DistBack=40633;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=92;REFWIDENED=5:134609078-134609169;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:./.:0:2:0:4:./.:0:0:0:0:1/1:1:20:./.:.:.:.:.:.
chr5	135139216	HG2_PB_SVrefine2Falcon2Bionano_3080	A	AATATTTTTTAATATCACAGTCAGTGTACACCCTGTGATATTATTTTTAATATTCTAAGGAGATATTACTCCTAATATCACAGTTGGTGTGCACCCTGTGATAATATTCATAATATTTTAGTGATG	20	PASS	ClusterIDs=HG4_PB_pbsv_6190:HG3_PB_HySA_9534:HG2_PB_HySA_11490:HG2_PB_assemblyticsfalcon_21981:HG3_PB_pbsv_5994:HG4_PB_SVrefine2PBcRDovetail_3091:HG2_PB_pbsv_6163:HG4_Ill_SVrefine2DISCOVARDovetail_4582:HG2_PB_SVrefine2PBcRplusDovetail_9123:HG2_PB_SVrefine2PB10Xhap12_4505:HG2_PB_SVrefine2Falcon2Bionano_3080:HG2_PB_SVrefine2Falcon1plusDovetail_9782:HG2_Ill_SVrefine2DISCOVARplusDovetail_10654:HG2_PB_PB10Xdip_23294:HG4_PB_HySA_9187;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10654:HG2_PB_SVrefine2Falcon1plusDovetail_9782:HG2_PB_SVrefine2Falcon2Bionano_3080:HG2_PB_SVrefine2PB10Xhap12_4505:HG2_PB_SVrefine2PBcRplusDovetail_9123:HG4_Ill_SVrefine2DISCOVARDovetail_4582;NumExactMatchSVs=6;ClusterMaxShiftDist=0.218623;ClusterMaxSizeDiff=0.218623;ClusterMaxEditDist=0.296875;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=125;DistBack=-129;DistForward=-1;DistMin=-129;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=416;REFWIDENED=5:135138930-135139345;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4490.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:80:1/1:9:26:2:32:./.:0:0:0:0:0/1:8:57:./.:.:.:.:.:.
chr5	136059711	HG2_PB_SVrefine2Falcon1plusDovetail_9784	G	GCAAGAGGACATTGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_11496:HG4_PB_HySA_9192:HG4_PB_pbsv_6193:HG2_PB_pbsv_6166:HG3_PB_pbsv_5996:HG2_PB_assemblyticsfalcon_21990:HG4_PB_SVrefine2PBcRDovetail_3092:HG3_PB_SVrefine2Falcon1Dovetail_3848:HG4_PB_SVrefine2Falcon1Dovetail_3743:HG4_Ill_MetaSV_4274:HG2_PB_SVrefine2PBcRplusDovetail_9124:HG2_PB_SVrefine2PB10Xhap12_4506:HG2_PB_SVrefine2Falcon2Bionano_3081:HG2_PB_SVrefine2Falcon1plusDovetail_9784:HG2_Ill_MetaSV_4113:HG3_PB_SVrefine2PBcRDovetail_2855:HG2_PB_HySA_11497:HG3_PB_HySA_9543:HG2_PB_PB10Xdip_23296:HG2_Ill_breakscan11_3619;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_MetaSV_4113:HG2_PB_SVrefine2Falcon1plusDovetail_9784:HG2_PB_SVrefine2Falcon2Bionano_3081:HG2_PB_SVrefine2PB10Xhap12_4506:HG2_PB_SVrefine2PBcRplusDovetail_9124:HG4_Ill_MetaSV_4274;NumExactMatchSVs=6;ClusterMaxShiftDist=0.134375;ClusterMaxSizeDiff=0.134375;ClusterMaxEditDist=0.196875;PBcalls=17;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=320;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:136059712-136059727;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4491.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:./.:0:3:0:6:./.:0:0:0:0:1/1:0:27:1/1:2:58:.:.:.
chr5	136394827	HG2_Ill_GATKHCSBGrefine_4307	A	AACCTCTGGGGTGGTTCCTCTGTGGAGATAGTAAGAAGTGGTTATGTTTGAAACTATATTTGAAAGTGGAGCCAGTATGATTTGCTGATAAGTTATATGTGGCATGTAAGAGAAAAAGAAGGTTGGTATATTTTTGGGTTTTCGCTTTTTATTCAGCAAATGGAAGTATAGAGTTGCAGTTAATTAAAATAGCAAACACTGCAGGATGAAGGAGCAGATTTCGGGGAAAGAGCAGG	20	PASS	ClusterIDs=HG2_Ill_Spiral_460:HG3_PB_pbsv_5998:HG2_PB_pbsv_6168:HG2_PB_assemblyticsfalcon_21992:HG3_Ill_MetaSV_4291:HG3_Ill_GATKHCSBGrefine_4242:HG2_PB_SVrefine2Falcon1plusDovetail_9785:HG2_Ill_MetaSV_4114:HG2_Ill_GATKHCSBGrefine_4307:HG2_PB_HySA_11499:HG3_PB_HySA_9545;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4307:HG2_Ill_MetaSV_4114:HG2_PB_SVrefine2Falcon1plusDovetail_9785:HG3_Ill_GATKHCSBGrefine_4242:HG3_Ill_MetaSV_4291;NumExactMatchSVs=5;ClusterMaxShiftDist=0.190476;ClusterMaxSizeDiff=0.185102;ClusterMaxEditDist=0.258503;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=235;DistBack=-1;DistForward=7848;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:136394828-136394828;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4492.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:42:0|1:43:0:2:31:./.:0:0:0:0:0/1:31:10:./.:.:.:.:.:.
chr5	136525700	HG2_PB_pbsv_6169	C	CCCGTTATAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTATCTCGCTCTGTCGCACAGTGCTGGAGTGCAGTGGCGCGGGATCTCGGCTCTCACATTGCCAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGTGGGGACTACAGGCGCCCCGCCACTAACGCCCGGCTAATTGTATTTTTAAGTTAGAGAGGGGTTTCACGTTTTTACCGGGATGGGCTCGATCTCGCTGACTCGTGATCCGCCCGCCTCGGGCCCTCCAAAGTGCTG	10	PASS	ClusterIDs=HG2_PB_pbsv_6169:HG2_PB_assemblyticsfalcon_21993:HG4_PB_pbsv_6194:HG2_PB_SVrefine2Falcon1plusDovetail_9786:HG3_PB_HySA_9546:HG2_PB_HySA_11501:HG2_PB_SVrefine2PB10Xhap12_4508:HG2_PB_SVrefine2Falcon2Bionano_3082:HG2_PB_SVrefine2PBcRplusDovetail_9125:HG4_PB_HySA_9194;NumClusterSVs=10;ExactMatchIDs=HG2_PB_pbsv_6169;NumExactMatchSVs=1;ClusterMaxShiftDist=0.113793;ClusterMaxSizeDiff=0.110345;ClusterMaxEditDist=0.232026;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=305;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=5:136525701-136525700;PctSeqSimilarity=0.9402;PctSizeSimilarity=0.9672;PctRecOverlap=0.9672;SizeDiff=10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4493.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:47:0|1:24:1:1:35:./.:0:0:0:0:0/1:22:11:0/1:8:7:.:.:.
chr5	136566485	HG4_PB_HySA_9195	G	GACATTCCATTTTCCTTTACCCAACCTCCCCAGAAAGTGACTTCTTACAAA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_8677:HG2_PB_pbsv_6170:HG4_PB_HySA_9195:HG2_PB_HySA_11502:HG3_PB_HySA_9547:HG4_Ill_SVrefine2DISCOVARDovetail_4584:HG4_Ill_Krunchall_9169:HG4_Ill_GATKHC_10421:HG4_Ill_250bpfermikitraw_8745:HG3_Ill_Krunchall_8652:HG3_Ill_GATKHC_10305:HG3_Ill_250bpfermikitraw_8379:HG2_PB_SVrefine2Falcon2Bionano_3083:HG2_PB_SVrefine2Falcon1plusDovetail_9787:HG2_Ill_Krunchall_8853:HG2_Ill_GATKHC_10328;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8677:HG4_PB_HySA_9195:HG4_Ill_SVrefine2DISCOVARDovetail_4584:HG4_Ill_Krunchall_9169:HG4_Ill_GATKHC_10421:HG4_Ill_250bpfermikitraw_8745:HG3_Ill_Krunchall_8652:HG3_Ill_GATKHC_10305:HG3_Ill_250bpfermikitraw_8379:HG2_PB_SVrefine2Falcon2Bionano_3083:HG2_PB_SVrefine2Falcon1plusDovetail_9787:HG2_Ill_Krunchall_8853:HG2_Ill_GATKHC_10328;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.266667;PBcalls=6;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=28114;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=5:136566486-136566587;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4494.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:26:0|1:35:0:2:26:./.:0:0:0:0:0/1:32:11:./.:.:.:.:.:.
chr5	136873758	HG2_PB_SVrefine2Falcon2Bionano_3086	A	ACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCGGGGAGCTGACCCCCCCACCTCCCTCCCAGACGGGGCAGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGAGCGGCTGGCCGGGCAGAGGGGCTCCTCAGTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3086:HG2_PB_SVrefine2PBcRplusDovetail_9128:HG2_PB_assemblyticsfalcon_21999:HG2_PB_SVrefine2Falcon1plusDovetail_9790:HG2_PB_SVrefine2PB10Xhap12_4511:HG4_PB_SVrefine2Falcon1Dovetail_3745:HG3_PB_SVrefine2Falcon1Dovetail_3850:HG2_PB_PB10Xdip_23299:HG4_PB_pbsv_6198:HG2_PB_pbsv_6173:HG3_PB_SVrefine2PBcRDovetail_2858:HG3_PB_pbsv_6003;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3086:HG3_PB_SVrefine2PBcRDovetail_2858;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0893855;ClusterMaxSizeDiff=0.0893855;ClusterMaxEditDist=0.336182;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=175;DistBack=-44;DistForward=85;DistMin=-44;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5351;REFWIDENED=5:136873759-136865510;PctSeqSimilarity=0.9788;PctSizeSimilarity=0.9831;PctRecOverlap=0.9274;SizeDiff=-3;StartDistance=-11;EndDistance=-11;GTMatch=1;TruScore=96;MatchId=4495.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:1:18:0:18:./.:0:0:0:0:0/1:2:10:./.:.:.:1699:.:.
chr5	138782154	HG2_Ill_GATKHCSBGrefine_4311	T	TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTC	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_4311:HG2_PB_pbsv_6177:HG4_Ill_GATKHCSBGrefine_4396;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4311:HG4_Ill_GATKHCSBGrefine_4396;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0300752;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.0902256;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=-17;DistForward=13;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=65;REFWIDENED=5:138782153-138782220;PctSeqSimilarity=0.9437;PctSizeSimilarity=0.8919;PctRecOverlap=0.8933;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=4496.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:27:./.:10:20:2:0:./.:0:0:0:0:0/1:15:29:./.:.:.:.:.:.
chr5	139595127	HG2_PB_SVrefine2Falcon1plusDovetail_9794	T	TTAAATTACAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAATAAATAAATAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3620:HG2_PB_pbsv_6178:HG4_PB_pbsv_6209:HG3_PB_pbsv_6009:HG2_PB_SVrefine2Falcon2Bionano_3088:HG4_PB_SVrefine2Falcon1Dovetail_3750:HG4_Ill_manta_1562:HG4_Ill_GATKHCSBGrefine_4397:HG3_PB_SVrefine2Falcon1Dovetail_3855:HG3_Ill_GATKHCSBGrefine_4248:HG2_PB_SVrefine2Falcon1plusDovetail_9794:HG2_Ill_manta_1782:HG2_Ill_GATKHCSBGrefine_4312:HG2_PB_HySA_11517:HG4_PB_HySA_9208:HG3_PB_HySA_9560;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4312:HG2_Ill_manta_1782:HG2_PB_SVrefine2Falcon1plusDovetail_9794:HG3_Ill_GATKHCSBGrefine_4248:HG3_PB_SVrefine2Falcon1Dovetail_3855:HG4_Ill_GATKHCSBGrefine_4397:HG4_Ill_manta_1562;NumExactMatchSVs=7;ClusterMaxShiftDist=0.100457;ClusterMaxSizeDiff=0.0943683;ClusterMaxEditDist=0.181009;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=327;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=5:139595128-139595138;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4497.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:35:0|1:28:6:4:20:./.:0:0:0:0:0/1:25:16:0/1:7:49:.:.:.
chr5	141379653	HG2_PB_SVrefine2PB10Xhap12_4521	A	ATGCTTGGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTGTAAAGATATTTTATTTCTTAGAGACTTTCTAAGAAGGAAAAGGCATATAAGTAAATCTTATTAGACCTTCACTGTAAAGGACATATCATATTTATTCATACACATGCTGGAATTATTGGTGCAGACATTTAAATACATTTTCTTTGAGAAAGTCCTTTTTTTTTTTTTTTTTTTGATGGAGTTTCCCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCAATCTCAGCTCACAACAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAATTTTTTTTATTTTTAGTAGAGACGGGGTTTCTCCGTGTTGGTCAGGCTGGTCTTGAACTCCTGATCTCAGGTGATCTGCCCGCCTTGGCCTGCCACAGTGCTGGGATTACAGTCGTGAGCCACCACAGCTGGCCTGGGAAAGTCCATTCTTTTTTTTTTTTTTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACCTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGACGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCTGGGCGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCTACCTCCCTACCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCAGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGCTCCTTGCCCTCGGGCCCCGCGGGGCCCGTCCGCTCCTCCAGCCGCTGCCTCCCGGGCGGCGCTCGCCGGCGCGGCGGCAAAGACTGAGACAGCTCCGCTGCCCGCTGAACTCCATCCTCCCGGCGGTCGGGCGGCGGCGGCTGCGGTCGGTCGCGGCAGCGGCTCCGCTTCATATCTGCAGCTGGGGCCCGCGGGCGTCAGCGCCGCGACTGTCCTGGCTCCGCACTGCCCCGGGCCGCAGCGCAGCCGCGCCAACCACCAGCCGCGGCCACCATGGCCAGACGGGCTCCCTAAGCCACCGACCCCAGCCCGCGGCGCCTTCGACCCTTCTGGGGCCTCCGGCGCCGCGACCTCCTCTGCCTGAAATTTCTTTTTTCTTTTCCTTTTATTTTATTTTATTTTTTGAGACGGAGTCTTGCTCTGTTGTCTGGGTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTGAAGCGATTTTCCTGCCTCAGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGTGCACCACCACGCCCAGCTATTTTTGTTTGTTTGTTTTTAGTAGAGAAGGGGTTTCACCATGTTGGCCAGGATCATCTCAATCTCTTGACCTCATGATCCGCCCGCCTCAGCCTCCCAAAGCGCTGGGATTATAGGTGTC	10	PASS	ClusterIDs=HG4_PB_HySA_9219:HG2_PB_pbsv_6181:HG4_PB_pbsv_6211:HG2_PB_assemblyticsPBcR_21284:HG3_PB_pbsv_6011:HG2_PB_PB10Xdip_23305:HG4_PB_SVrefine2PBcRDovetail_3102:HG2_PB_SVrefine2Falcon2Bionano_3092:HG3_PB_SVrefine2PBcRDovetail_2868:HG2_PB_SVrefine2PBcRplusDovetail_9137:HG4_PB_SVrefine2Falcon1Dovetail_3754:HG2_PB_SVrefine2PB10Xhap12_4521:HG3_PB_SVrefine2Falcon1Dovetail_3860:HG2_PB_SVrefine2Falcon1plusDovetail_9800;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4521;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0575458;ClusterMaxSizeDiff=0.0575458;ClusterMaxEditDist=0.185676;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=3523;DistBack=6383;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:141379654-141379669;PctSeqSimilarity=0.989;PctSizeSimilarity=0.9918;PctRecOverlap=0.9921;SizeDiff=29;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4498.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:88:1/1:0:31:0:23:./.:0:0:0:0:1/1:0:16:1/1:1:535:.:3521:.
chr5	142094695	HG2_Ill_GATKHCSBGrefine_4318	G	GTGTATATATATATACACACACACATATATATGTATACATATATACACATATATATGTGTGTGTGTATATATATA	20	PASS	ClusterIDs=HG4_PB_HySA_9239:HG3_PB_pbsv_6019:HG2_PB_PB10Xdip_23312:HG2_PB_pbsv_6190:HG4_Ill_manta_1563:HG4_Ill_Krunchall_9213:HG4_Ill_250bpfermikitraw_8790:HG2_Ill_scalpel_6124:HG2_Ill_manta_1784:HG2_Ill_Krunchall_8894:HG2_Ill_250bpfermikitraw_8719:HG2_PB_assemblyticsPBcR_21297:HG4_Ill_GATKHC_10473:HG4_Ill_GATKHCSBGrefine_4404:HG3_Ill_manta_1478:HG3_Ill_Spiral_6843:HG3_Ill_GATKHC_10350:HG3_Ill_GATKHCSBGrefine_4256:HG3_Ill_250bpfermikitraw_8415:HG3_Ill_150bpfermikitraw_8230:HG2_Ill_GATKHC_10376:HG2_Ill_GATKHCSBGrefine_4318:HG2_PB_HySA_11546:HG4_PB_pbsv_6216:HG3_PB_HySA_9582;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4318:HG2_Ill_GATKHC_10376:HG3_Ill_150bpfermikitraw_8230:HG3_Ill_250bpfermikitraw_8415:HG3_Ill_GATKHCSBGrefine_4256:HG3_Ill_GATKHC_10350:HG3_Ill_Spiral_6843:HG3_Ill_manta_1478:HG4_Ill_GATKHCSBGrefine_4404:HG4_Ill_GATKHC_10473;NumExactMatchSVs=10;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.306748;PBcalls=8;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=118056;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=11;REFWIDENED=5:142094694-142094707;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4500.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:64:1/1:1:25:2:35:./.:0:0:0:0:./.:3:38:./.:.:.:.:.:.
chr5	142354995	HG3_Ill_GATKHCSBGrefine_4257	T	TCTGTCTGTCTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGATTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3621:HG2_PB_pbsv_6191:HG3_PB_pbsv_6020:HG4_PB_SVrefine2Falcon1Dovetail_3758:HG2_PB_SVrefine2Falcon1plusDovetail_9806:HG2_PB_SVrefine2Falcon2Bionano_3097:HG3_PB_SVrefine2Falcon1Dovetail_3865:HG3_Ill_MetaSV_4301:HG3_Ill_GATKHCSBGrefine_4257:HG2_Ill_MetaSV_4121:HG2_Ill_GATKHCSBGrefine_4319:HG3_PB_HySA_9585;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4319:HG2_Ill_MetaSV_4121:HG3_Ill_GATKHCSBGrefine_4257:HG3_Ill_MetaSV_4301:HG3_PB_SVrefine2Falcon1Dovetail_3865;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0544;ClusterMaxSizeDiff=0.0544;ClusterMaxEditDist=0.144427;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=305;DistBack=24417;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:142354996-142355011;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4501.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:44:0|1:31:0:0:31:./.:0:0:0:0:0/1:24:24:./.:5:41:.:.:.
chr5	143010799	HG2_PB_pbsv_6197	A	AACATTTCTCCGGCGGGCGCCGGTGGCACAACATGTAATCCAGCACTTTGGAGGCCAGAGTCGGCACGGATCACGAGGTCAGAGATCGATGACATCCCGCTAAAACGGATGAAACCCCGTCTCTACATAAAAATACAAAAAAATTAGCCCGGCCGTACGCCGGCGCCTGTAGTCCCAGCTACTTGGGCTGAGCAGGAGGAAATGCGTGAACCTCCGGCAGGCGGAGCTTGCAGTGCAGCCGAGCATCCGCCACTGCACCCCAGCTGGGCGATATCATGAGCGAACTCCGTCTCAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAATC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9809:HG3_PB_pbsv_6024:HG2_Ill_MetaSV_4123:HG2_PB_pbsv_6197:HG3_PB_SVrefine2Falcon1Dovetail_3867;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_6197;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0864198;ClusterMaxSizeDiff=0.0864198;ClusterMaxEditDist=0.201201;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=-7;DistForward=1894;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:143010800-143010800;PctSeqSimilarity=0.9216;PctSizeSimilarity=1;PctRecOverlap=0.9694;SizeDiff=0;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=96;MatchId=4502.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:29:./.:15:6:13:10:./.:0:0:0:0:0/0:37:1:0/1:8:14:.:.:.
chr5	143025831	HG4_Ill_GATKHCSBGrefine_4408	G	GTTTTTCAGGCTTGTGTGGCCAGGTGTTCTGGCTAGATATTTTCCCCTGCTT	20	PASS	ClusterIDs=HG3_PB_HySA_9589:HG4_PB_pbsv_6221:HG4_Ill_svaba_8099:HG4_Ill_scalpel_6012:HG4_Ill_manta_1565:HG4_Ill_Krunchall_9223:HG4_Ill_GATKHC_10483:HG4_Ill_GATKHCSBGrefine_4408:HG4_Ill_FB_5734:HG4_Ill_250bpfermikitraw_8799:HG4_Ill_150bpfermikitraw_8419:HG3_Ill_svaba_8087:HG3_Ill_scalpel_6215:HG3_Ill_manta_1479:HG3_Ill_Spiral_6848:HG3_Ill_Krunchall_8697:HG3_Ill_GATKHC_10361:HG3_Ill_GATKHCSBGrefine_4260:HG3_Ill_FB_5621:HG3_Ill_250bpfermikitraw_8423:HG3_Ill_150bpfermikitraw_8239:HG2_Ill_svaba_7990:HG2_Ill_manta_1788:HG2_Ill_SpiralSDKrefine_14021:HG2_Ill_Krunchall_8902:HG2_Ill_GATKHC_10384:HG2_Ill_GATKHCSBGrefine_4323:HG2_Ill_250bpfermikitraw_8728:HG2_Ill_150bpfermikitraw_8189:HG3_PB_pbsv_6025:HG2_PB_HySA_11556;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8189:HG2_Ill_250bpfermikitraw_8728:HG2_Ill_GATKHCSBGrefine_4323:HG2_Ill_GATKHC_10384:HG2_Ill_Krunchall_8902:HG2_Ill_SpiralSDKrefine_14021:HG2_Ill_manta_1788:HG2_Ill_svaba_7990:HG3_Ill_150bpfermikitraw_8239:HG3_Ill_250bpfermikitraw_8423:HG3_Ill_FB_5621:HG3_Ill_GATKHCSBGrefine_4260:HG3_Ill_GATKHC_10361:HG3_Ill_Krunchall_8697:HG3_Ill_Spiral_6848:HG3_Ill_manta_1479:HG3_Ill_scalpel_6215:HG3_Ill_svaba_8087:HG4_Ill_150bpfermikitraw_8419:HG4_Ill_250bpfermikitraw_8799:HG4_Ill_FB_5734:HG4_Ill_GATKHCSBGrefine_4408:HG4_Ill_GATKHC_10483:HG4_Ill_Krunchall_9223:HG4_Ill_manta_1565:HG4_Ill_scalpel_6012:HG4_Ill_svaba_8099;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0560748;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.203704;PBcalls=4;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=27;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=12;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=-1;DistForward=58603;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=5:143025830-143025833;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4503.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:49:0|1:37:13:2:30:./.:0:0:0:0:0/1:27:34:./.:.:.:.:.:.
chr5	143136114	HG3_Ill_250bpfermikitraw_8424	G	GATAATCTCTAATTGAAAGGGTTTCTGCTAATGTCACTATAGTTTGGGTCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3622:HG3_PB_HySA_9591:HG2_PB_pbsv_6199:HG2_PB_SVrefine2PB10Xhap12_4529:HG2_PB_HySA_11557:HG2_PB_SVrefine2PBcRplusDovetail_9143:HG3_Ill_svaba_8088:HG3_Ill_SVrefine2DISCOVARDovetail_4715:HG3_Ill_Krunchall_8698:HG3_Ill_GATKHC_10362:HG3_Ill_GATKHCSBGrefine_4261:HG3_Ill_250bpfermikitraw_8424:HG3_Ill_150bpfermikitraw_8240:HG3_CG_vcfBeta_3488:HG2_Ill_svaba_7991:HG2_Ill_SVrefine2DISCOVARplusDovetail_10676:HG2_Ill_Krunchall_8903:HG2_Ill_GATKHC_10386:HG2_Ill_GATKHCSBGrefine_4324:HG2_Ill_250bpfermikitraw_8730:HG2_Ill_150bpfermikitraw_8190:HG2_CG_vcfBeta_3650;NumClusterSVs=22;ExactMatchIDs=HG2_CG_vcfBeta_3650:HG2_Ill_150bpfermikitraw_8190:HG2_Ill_250bpfermikitraw_8730:HG2_Ill_GATKHCSBGrefine_4324:HG2_Ill_GATKHC_10386:HG2_Ill_Krunchall_8903:HG2_Ill_SVrefine2DISCOVARplusDovetail_10676:HG2_Ill_svaba_7991:HG3_CG_vcfBeta_3488:HG3_Ill_150bpfermikitraw_8240:HG3_Ill_250bpfermikitraw_8424:HG3_Ill_GATKHCSBGrefine_4261:HG3_Ill_GATKHC_10362:HG3_Ill_Krunchall_8698:HG3_Ill_SVrefine2DISCOVARDovetail_4715:HG3_Ill_svaba_8088;NumExactMatchSVs=16;ClusterMaxShiftDist=0.116505;ClusterMaxSizeDiff=0.0970874;ClusterMaxEditDist=0.135922;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=2;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=2;HG2count=13;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=50;DistBack=1237;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=50;REFWIDENED=5:143136115-143136164;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4504.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:33:0|1:25:2:5:27:./.:0:0:0:0:0/1:13:36:./.:.:.:.:.:.
chr5	144563611	HG2_PB_pbsv_6206	T	TATACATATCTTCATGTTATATGTTATATATTTCTATATAATATCTTCATGTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATTATTTCTATATACATTATCTTCATGTTATATTGTTTTATATTTCTATATACATTCTTTCATGTTATATGTTATATATTTCTATTACATATCTTCATGTTATTATTTTATAGTATTTCTATATACATATCTTTCGATGTTATATGTTATTATTTCTATATACATATCTTCATGTTAGTATGTTATATATTTCTATATAACCATATTCTTCATGTTATATGTTATATATTTCTATAACCATATCTCATGTTATATGTTATATATTTTCTATATACATATCTTCATGTTTTATATGTTAGTTATTGTCTATTAATTACATATCTTTCATGGTTATATGTTATATATTTCTATATACATATCTTCATGTTATTGTTATATATATCTATATACATATCTTATGTTTATATGTTATATATCTATATTACATATCTTCATGTTATATTGTTATATATTTTCTATATACATATCTTTATGTTATATGTTATATATTTCTATATACATATCTTTCATGTTTGTTATATATTTTCCTATATACATATCTTTCATGTTATATGTTATATATTTTCTATATAACCATATCTTCATGTCTATATGTTAATATTTCTATATTAACATATCTTCATGTTATTGTTATATATTTTCTATTCATACGATATTCTTCAATGTTATATGTTATATATTTCTTATACATATCTTCATGTGATTATGTTATATATTTATATATCACATATCTTCATGTTATATGTTATATATTTATATTATACATATCTTCCATGTTATATGTTATATATTTATATATACATATCTTCATGTTATATGTTATATATTTATATATTATACTTCTTCATGTTATATGTTATATATTATATATACATATCTTCATGTTATATGTTATATTTTATATACATATCTTCATGTTATATGTTATTATATTATAATACATATCTTCATGTATATGTGTTATATATTTATATATA	10	PASS	ClusterIDs=HG2_PB_pbsv_6206:HG3_PB_pbsv_6031;NumClusterSVs=2;ExactMatchIDs=HG2_PB_pbsv_6206;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0348304;ClusterMaxSizeDiff=0.0348304;ClusterMaxEditDist=0.162236;PBcalls=2;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1109;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=567;REFWIDENED=5:144563046-144563612;PctSeqSimilarity=0.9638;PctSizeSimilarity=0.9739;PctRecOverlap=0.853;SizeDiff=29;StartDistance=149;EndDistance=149;GTMatch=1;TruScore=93;MatchId=4505.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:15:74:1/1:4:16:3:18:0/0:18:0:12:0:0/0:22:0:0/1:31:15:.:1031:.
chr5	146369612	HG2_PB_SVrefine2Falcon1plusDovetail_9818	T	TAAAACCATAAAACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23327:HG3_PB_pbsv_6035:HG4_PB_pbsv_6234:HG4_PB_assemblyticsfalcon_21537:HG2_PB_assemblyticsfalcon_22067:HG3_PB_HySA_9614:HG2_PB_pbsv_6213:HG2_PB_HySA_11598:HG2_Ill_breakscan11_3626:HG4_PB_HySA_9274:HG4_PB_SVrefine2PBcRDovetail_3115:HG4_PB_SVrefine2Falcon1Dovetail_3774:HG4_Ill_manta_1568:HG4_Ill_MetaSV_4289:HG4_Ill_GATKHCSBGrefine_4414:HG3_PB_SVrefine2PBcRDovetail_2879:HG3_Ill_MetaSV_4305:HG3_Ill_GATKHCSBGrefine_4264:HG2_PB_SVrefine2PBcRplusDovetail_9153:HG2_PB_SVrefine2PB10Xhap12_4541:HG2_PB_SVrefine2Falcon2Bionano_3108:HG2_PB_SVrefine2Falcon1plusDovetail_9818:HG2_Ill_MetaSV_4128:HG2_Ill_GATKHCSBGrefine_4332:HG3_PB_SVrefine2Falcon1Dovetail_3879;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4332:HG2_Ill_MetaSV_4128:HG2_PB_SVrefine2Falcon1plusDovetail_9818:HG2_PB_SVrefine2Falcon2Bionano_3108:HG2_PB_SVrefine2PB10Xhap12_4541:HG2_PB_SVrefine2PBcRplusDovetail_9153:HG3_Ill_GATKHCSBGrefine_4264:HG3_Ill_MetaSV_4305:HG3_PB_SVrefine2PBcRDovetail_2879:HG4_Ill_GATKHCSBGrefine_4414:HG4_Ill_MetaSV_4289:HG4_Ill_manta_1568;NumExactMatchSVs=12;ClusterMaxShiftDist=0.134796;ClusterMaxSizeDiff=0.134796;ClusterMaxEditDist=0.253968;PBcalls=17;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=318;DistBack=26399;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:146369613-146369626;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4507.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:86:1/1:2:10:2:14:./.:0:0:0:0:1/1:0:15:1/1:3:54:.:.:.
chr5	146396115	HG4_Ill_150bpfermikitraw_8450	A	AAGGGAAAGGAAGAAAATAAAGGAGTAAAAATAAAATAAAAAAGATATGGGCCTTGCCATT	20	PASS	ClusterIDs=HG2_PB_pbsv_6214:HG2_PB_HySA_11599:HG4_PB_pbsv_6236:HG3_PB_pbsv_6036:HG4_Ill_GATKHC_10517:HG4_Ill_GATKHCSBGrefine_4416:HG3_Ill_GATKHC_10395:HG3_Ill_GATKHCSBGrefine_4265:HG2_Ill_GATKHC_10425:HG2_Ill_GATKHCSBGrefine_4333:HG4_Ill_manta_1569:HG4_Ill_Cortex_3015:HG3_Ill_manta_1485:HG3_Ill_Spiral_6867:HG3_Ill_Cortex_3035:HG2_Ill_manta_1793:HG2_Ill_SpiralSDKrefine_14053:HG2_Ill_Cortex_7310:HG4_PB_HySA_9276:HG4_Ill_svaba_8123:HG4_Ill_scalpel_6038:HG4_Ill_Krunchall_9255:HG4_Ill_250bpfermikitraw_8830:HG4_Ill_150bpfermikitraw_8450:HG3_Ill_svaba_8102:HG3_Ill_scalpel_6232:HG3_Ill_Krunchall_8722:HG3_Ill_250bpfermikitraw_8450:HG3_Ill_150bpfermikitraw_8265:HG2_Ill_svaba_8012:HG2_Ill_scalpel_6156:HG2_Ill_Krunchall_8935:HG2_Ill_250bpfermikitraw_8762:HG2_Ill_150bpfermikitraw_8218;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8218:HG2_Ill_250bpfermikitraw_8762:HG2_Ill_Krunchall_8935:HG2_Ill_scalpel_6156:HG2_Ill_svaba_8012:HG3_Ill_150bpfermikitraw_8265:HG3_Ill_250bpfermikitraw_8450:HG3_Ill_Krunchall_8722:HG3_Ill_scalpel_6232:HG3_Ill_svaba_8102:HG4_Ill_150bpfermikitraw_8450:HG4_Ill_250bpfermikitraw_8830:HG4_Ill_Krunchall_9255:HG4_Ill_scalpel_6038:HG4_Ill_svaba_8123;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0813008;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.174603;PBcalls=5;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=15858;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=5:146396114-146396116;PctSeqSimilarity=0.984;PctSizeSimilarity=0.9833;PctRecOverlap=0.9508;SizeDiff=1;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=97;MatchId=4508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:1:28:0:9:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr5	148096766	HG2_Ill_MetaSV_4134	T	TAAGACTGGCAACTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3627:HG2_PB_pbsv_6223:HG2_PB_assemblyticsfalcon_22086:HG4_PB_SVrefine2Falcon1Dovetail_3779:HG4_PB_pbsv_6245:HG3_PB_SVrefine2Falcon1Dovetail_3884:HG2_PB_HySA_11617:HG2_PB_SVrefine2PBcRplusDovetail_9158:HG2_PB_SVrefine2PB10Xhap12_4547:HG4_Ill_MetaSV_4296:HG2_Ill_MetaSV_4134:HG2_Ill_GATKHCSBGrefine_4367:HG2_PB_SVrefine2Falcon1plusDovetail_9822;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4367:HG2_Ill_MetaSV_4134:HG4_Ill_MetaSV_4296;NumExactMatchSVs=3;ClusterMaxShiftDist=0.231511;ClusterMaxSizeDiff=0.22508;ClusterMaxEditDist=0.282958;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=931;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:148096767-148096780;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:25:0|1:19:0:0:20:./.:0:0:0:0:0/1:23:8:0/1:14:36:.:.:.
chr5	148917331	HG2_PB_pbsv_6226	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGGAGTCTCGCTCTGTCGCCCAGGCTGGAGGTGGCAGTGGCGGGATTCTCGGCTCACTGCAGCTCCCGCCTCCCGGGTTTCACGCGCATTCTCCTGCACAGCCTCCAAGTAGCTGGGACTACAGGCGCCCGCCACTTAACGCCCGGCTAATTTTTTGTATTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCTGGGAATGGTCTTCGTCTCCTGACCTCGTGAATCCGCCCACGCCTCGGCCTCACCAAAGTGCTGGGAATTACAAGGCGTGAGCCAACCGCGCCCGGCCCCCACATGAATAGTC	20	PASS	ClusterIDs=HG4_PB_HySA_9297:HG2_PB_HySA_11622:HG2_PB_pbsv_6226:HG4_PB_pbsv_6248:HG2_PB_assemblyticsfalcon_22094:HG3_PB_pbsv_6046:HG2_Ill_breakscan11_3628:HG2_PB_SVrefine2Falcon2Bionano_3113:HG4_PB_SVrefine2PBcRDovetail_3121:HG2_PB_SVrefine2Falcon1plusDovetail_9825:HG3_PB_SVrefine2Falcon1Dovetail_3887:HG4_PB_SVrefine2Falcon1Dovetail_3781;NumClusterSVs=12;ExactMatchIDs=HG2_PB_pbsv_6226;NumExactMatchSVs=1;ClusterMaxShiftDist=0.12481;ClusterMaxSizeDiff=0.12481;ClusterMaxEditDist=0.212389;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=341;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:148917332-148917332;PctSeqSimilarity=0.9615;PctSizeSimilarity=0.9677;PctRecOverlap=0.9443;SizeDiff=11;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=95;MatchId=4510.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:34:0|1:24:5:3:18:./.:0:0:0:0:0/1:21:5:0/1:8:12:.:.:.
chr5	150546135	HG2_PB_SVrefine2PBcRplusDovetail_9165	T	TGATCATACAGATCTTTTTTTCTTTTTTTTTTTTTTTTTTGTATTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGGCCGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCTCTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACTTCCCGGACAGGGCGGCTGGCTGGGCGGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCCGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCTACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCCGGCGGAGATGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCAGAGAGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTTCTCACATCCCAGATGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCAGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGCTCCTTGCCCTCGGGCCCCGCGGGGCCCGTCCGCTCCTCCAGCCGCTGCCTCCCGGGCGGCGCTCGCCGGCGCGGCGGCAAAGACTGAGACAGCTCCGCTGCCCGCTGAACTCCATCCTCCCGGCGGTCGGGCGGCGGCGGCTGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3629:HG2_PB_HySA_11631:HG2_PB_SVrefine2PBcRplusDovetail_9165:HG2_PB_SVrefine2PB10Xhap12_4558:HG2_PB_pbsv_6235:HG2_PB_PB10Xdip_23344;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9165;NumExactMatchSVs=1;ClusterMaxShiftDist=0.027164;ClusterMaxSizeDiff=0.0263531;ClusterMaxEditDist=0.0883777;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=2465;DistBack=12258;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=5:150546136-150546150;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9972;PctRecOverlap=0.9968;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:50:0|1:21:0:1:36:./.:0:0:0:0:0/1:33:12:0/1:86:195:.:2525:.
chr5	152196891	HG2_Ill_manta_1805	ACACTGA	TCGCTCTTTCTCTATATGTATATATGTATATGTATACACACATATATACATATATACACACACACATATATACATACACACATACACACACACACACACACACACACACACACACACACACAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10717:HG3_Ill_SVrefine2DISCOVARDovetail_4762:HG2_PB_SVrefine2Falcon2Bionano_3122:HG2_Ill_manta_1805:HG3_PB_SVrefine2PBcRDovetail_2887:HG2_PB_SVrefine2PBcRplusDovetail_9170:HG2_PB_SVrefine2PB10Xhap12_4565:HG4_PB_pbsv_6264:HG3_Ill_MetaSV_4318:HG2_PB_pbsv_6243:HG3_PB_pbsv_6058:HG2_Ill_breakscan11_3630:HG3_Ill_Spiral_6904:HG4_Ill_manta_1579:HG4_Ill_MetaSV_4308:HG4_Ill_GATKHCSBGrefine_4443:HG2_Ill_GATKHCSBGrefine_4386:HG2_PB_HySA_11642:HG3_PB_HySA_9652:HG4_PB_SVrefine2Falcon1Dovetail_3793:HG4_PB_SVrefine2PBcRDovetail_3134:HG3_PB_SVrefine2Falcon1Dovetail_3898:HG2_PB_SVrefine2Falcon1plusDovetail_9835:HG4_Ill_SVrefine2DISCOVARDovetail_4647;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_manta_1805:HG2_PB_SVrefine2Falcon2Bionano_3122:HG3_Ill_SVrefine2DISCOVARDovetail_4762;NumExactMatchSVs=3;ClusterMaxShiftDist=0.145923;ClusterMaxSizeDiff=0.145923;ClusterMaxEditDist=0.252101;PBcalls=13;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=116;DistBack=-4;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=41;REFWIDENED=5:152196855-152196895;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9915;PctRecOverlap=0.6667;SizeDiff=-1;StartDistance=35;EndDistance=41;GTMatch=1;TruScore=88;MatchId=4513.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:32:0:15:./.:0:0:0:0:0/1:9:29:./.:.:.:.:.:.
chr5	152529722	HG2_Ill_MetaSV_4146	T	TTCAACACAGTATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3631:HG2_PB_pbsv_6244:HG3_PB_pbsv_6059:HG2_PB_assemblyticsfalcon_22123:HG3_PB_assemblyticsfalcon_22040:HG2_PB_HySA_11645:HG3_PB_SVrefine2PBcRDovetail_2888:HG3_Ill_MetaSV_4319:HG3_Ill_GATKHCSBGrefine_4288:HG2_PB_SVrefine2Falcon1plusDovetail_9836:HG2_Ill_MetaSV_4146:HG2_Ill_GATKHCSBGrefine_4387:HG3_PB_SVrefine2Falcon1Dovetail_3899:HG2_PB_SVrefine2PB10Xhap12_4566:HG2_PB_SVrefine2PBcRplusDovetail_9171:HG2_PB_HySA_11644;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4387:HG2_Ill_MetaSV_4146:HG2_PB_SVrefine2Falcon1plusDovetail_9836:HG3_Ill_GATKHCSBGrefine_4288:HG3_Ill_MetaSV_4319;NumExactMatchSVs=5;ClusterMaxShiftDist=0.115942;ClusterMaxSizeDiff=0.115942;ClusterMaxEditDist=0.206119;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=315;DistBack=93660;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:152529723-152529738;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4514.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:66:./.:3:42:20:9:./.:0:0:0:0:0/1:38:11:0/1:6:21:.:.:.
chr5	153327727	HG2_PB_SVrefine2PB10Xhap12_4568	CATATCAGG	AGCGAGTCTGGGGGAGGGGTGCCCACCATTGCTCAGGCTTGAGTAGGTAATCAAAGCCACCGGGAAGCTCCAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTGCCTCTGTAGACTCCACCACTGGGGGCAGGGCACAGACAAACAAAACACAGCAATAACCTCAGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCTAGCACGCAGCTTGAGATCTGAGAATGGGCACACTGCCTCCTCAAGTGGGTCCCAGATCCCCAAGTAGCCTAACTGGGAGGAAATACAGAGAACGCCACAAAGATACTCCTCAAGAAGAGCAACTCCAAAACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTTGGCTTACCCACAAAGGGAAGCCCATCAGACTAACTGCCGATATCTTGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACGTTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAAGTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTCACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATCAAGGCTAGGAAGAAACTGCATCAACTAATGAGCAAAATAACCACCTAACATCATAATGACAGGATCGAATTCACACATAACAGTACTAACCTTAAATGTAAATGGACTAAATGCTCCAATTAAAAGGCACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACATGCAGAGACACACATAGTCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCAACTAATACAGGAGCACCCAGATTCATAAACAAGTCCTTAGTGACCTACAAAGTGACTTAGACTCCCACACAATAATAATGGGAGATTTTAACACCCCACTGTCAACATTAGACAGATCAATGAGACAGAAAGTTAACAAGGATATCCAGGAATTGAACTCAGCTCTGCACCAAGCGGACTTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTTTCAACCCCACACCATACCTACTCCAATATTGACCACATAGTTGGAAATAAAGCACTCCTCAGCAAATGTAAAAGAGCAGAAATTATAACAAACTATCTCTCAGACAACAGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAGAACCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATCACAAAATGAAGGCAGAAATAAAGATGTTCTCTGAAACCAACAAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCTAAAATTGACACCCTAACATCACAATTAAAAGAACTAGGGAAGCAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAACGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACAAAATTGATAGACCACTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGATGCAATAAAAAATGATAAAGGGGATATCACCACTGATCCCACAGAAATACAAACTACCATCAGAGAATATTATAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCAACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACTAATAACAGGCCCTGAAATTGAGGCAATAATTAATAGCTTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCCGAATCCTACCAGAGGTACAAGGAGTTGCTGGTACCATTCCTTCTGAAACTACTCCAATTAATAGAAAAAGAGGGAATCCTACCTAACTCATTTGAGGCCAGCATCATCCTGATACCAAAGCCGGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCTTGATGGACATTGATGCAAAAATCCTTAATAAAATACTGGCAAACCAAATCCAGCAACACATCAAAAAGCTTCTCCACCATGATCAAGTGGGCTTCTCCCTGGGATGCAAGGCTGGTTCAACATACGAAAACCAATAAATGTAGTCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATAGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCTTACTGAATAGACAAAAACTGGAAGCATTCCCTTTGAAAACTGAAACAAGACAGGGATGCCCTCTCTCACCACTCTTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGCATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCTGTCATCTCAGCCCAAAATCTCATTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAAAGTGCAAAAATCACAAGCATTCCTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATATAAACAAATGGAAGAACATTCCAGGCTCATGGGTAGGAAGAATCAATATTGTGAAAATGGCCATACCGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAGGAGCCCACATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCCTCATGCTACCTGACTTCAAACTATACTACAAGTCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGACCAATGGAACAGAACAGAGCCCTCAGAAATAATGCAACATGTCTACAACCATCAGATCTTTGACAGACCTGACAAAAACAAGAAATGGGGAAAGGATTCTCTATTTAATAAATGGTACTGGGAAAACTGGCTAGCCATATGGAGAAAGCTGAAATTGGATCCCTTCCTTGCACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTACATGTTAGATCTAAAACCATAAAAACACTAGAAGAAAACCTAGGCAATACCATTCAAGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACCACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCCAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGTCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCCGTTAGAATGGCAATCATTAGAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACAGGTTTACACTGTTGGTTGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGC	20	PASS	ClusterIDs=HG3_PB_HySA_9663:HG3_PB_pbsv_6063:HG2_Ill_SVrefine2DISCOVARplusDovetail_10723:HG2_10X_SVrefine210Xhap12_4506:HG3_PB_SVrefine2PBcRDovetail_2890:HG2_PB_SVrefine2PBcRplusDovetail_9173:HG2_PB_SVrefine2PB10Xhap12_4568:HG4_PB_SVrefine2Falcon1Dovetail_3795:HG3_PB_SVrefine2Falcon1Dovetail_3901:HG2_PB_SVrefine2Falcon2Bionano_3124:HG2_PB_SVrefine2Falcon1plusDovetail_9838;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4568:HG2_PB_SVrefine2PBcRplusDovetail_9173;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0331931;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.103553;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=4252;DistBack=4;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:153327736-153327726;PctSeqSimilarity=0.9992;PctSizeSimilarity=1;PctRecOverlap=0.9979;SizeDiff=0;StartDistance=1;EndDistance=9;GTMatch=0;TruScore=99;MatchId=4515.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:96:1/1:0:31:0:31:./.:0:0:0:0:1/1:0:35:1/1:1:892:.:4231:.
chr5	153936673	HG2_Ill_MetaSV_4149	T	TTACTAATCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGCGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCTGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3632:HG4_PB_pbsv_6267:HG2_PB_pbsv_6249:HG4_Ill_MetaSV_4309:HG4_Ill_GATKHCSBGrefine_4447:HG2_Ill_MetaSV_4149:HG2_Ill_GATKHCSBGrefine_4391:HG2_PB_SVrefine2PB10Xhap12_4571:HG4_PB_SVrefine2PBcRDovetail_3135:HG4_PB_HySA_9330:HG2_PB_HySA_11659;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4391:HG2_Ill_MetaSV_4149:HG4_Ill_GATKHCSBGrefine_4447:HG4_Ill_MetaSV_4309;NumExactMatchSVs=4;ClusterMaxShiftDist=0.182609;ClusterMaxSizeDiff=0.173913;ClusterMaxEditDist=0.210526;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=118;DistBack=-1;DistForward=1598;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=5:153936674-153936685;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:21:./.:10:13:10:2:./.:0:0:0:0:0/1:28:9:./.:.:.:.:.:.
chr5	155612843	HG2_PB_SVrefine2PBcRplusDovetail_9177	G	GTATATATATATGTGTGTGTGTGTGTGTATATATATATATATGTATATATATATATACACACACACACACACATATATATATATATATATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9841:HG3_PB_SVrefine2PBcRDovetail_2895:HG2_PB_SVrefine2Falcon2Bionano_3129:HG2_PB_SVrefine2PBcRplusDovetail_9177:HG4_PB_SVrefine2Falcon1Dovetail_3798:HG2_PB_pbsv_6254;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9177;NumExactMatchSVs=1;ClusterMaxShiftDist=0.10582;ClusterMaxSizeDiff=0.10582;ClusterMaxEditDist=0.185792;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=90;DistBack=-10;DistForward=1;DistMin=-10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=5:155612827-155612854;PctSeqSimilarity=0.9785;PctSizeSimilarity=0.9574;PctRecOverlap=0.9579;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=4517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:29:1|0:2:27:44:1:./.:0:0:0:0:0/1:19:17:./.:.:.:.:3296:.
chr5	155619864	HG2_PB_assemblyticsPBcR_21414	TAAGAAGCCAGGTG	GTTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGAATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAACTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATCATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTTTGTAGTATTTTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTGATGTACCCAGTAGTCATTCAGGAGCAGGTTGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTTGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGTACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGGTAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_9340:HG2_PB_pbsv_6255:HG4_PB_pbsv_6271:HG3_PB_pbsv_6070:HG2_PB_HySA_11677:HG2_PB_PB10Xdip_23359:HG2_PB_assemblyticsPBcR_21414:HG3_PB_assemblyticsfalcon_22069:HG3_PB_SVrefine2PBcRDovetail_2896:HG2_PB_SVrefine2Falcon1plusDovetail_9842:HG2_PB_SVrefine2PBcRplusDovetail_9178:HG4_PB_SVrefine2PBcRDovetail_3137:HG4_PB_SVrefine2Falcon1Dovetail_3799:HG3_PB_SVrefine2Falcon1Dovetail_3904:HG2_PB_SVrefine2PB10Xhap12_4577:HG2_Ill_breakscan11_3633;NumClusterSVs=16;ExactMatchIDs=HG2_PB_assemblyticsPBcR_21414;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0669419;ClusterMaxSizeDiff=0.0669419;ClusterMaxEditDist=0.16611;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=3286;DistBack=-1;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:155619878-155619863;PctSeqSimilarity=0.998;PctSizeSimilarity=0.9921;PctRecOverlap=0.9961;SizeDiff=-26;StartDistance=0;EndDistance=13;GTMatch=0;TruScore=99;MatchId=4518.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:52:0|1:40:1:0:37:./.:0:0:0:0:0/1:32:10:0/1:127:439:.:3296:.
chr5	155850203	HG3_Ill_manta_1494	A	AATATTATATTTTATTATAATATAATATAATATTATATTTTATTATAATATAATATAATATAATATTTTATTATAATATAATATTATATTTTATTATAATATAATATTATATTATAATATAATATAATATTGTATTATATTTTATTATAATATAATATATTATATTATAAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_2897:HG3_PB_pbsv_6071:HG2_PB_PB10Xdip_23360:HG3_PB_HySA_9682:HG3_Ill_GATKHCSBGrefine_4297:HG2_Ill_GATKHCSBGrefine_4396:HG4_Ill_SVrefine2DISCOVARDovetail_4660:HG4_Ill_GATKHC_10604:HG4_Ill_GATKHCSBGrefine_4451:HG3_Ill_manta_1494:HG2_Ill_manta_1814:HG2_PB_HySA_11679:HG4_PB_pbsv_6272:HG4_PB_SVrefine2Falcon1Dovetail_3800:HG2_PB_SVrefine2PBcRplusDovetail_9179:HG2_PB_SVrefine2PB10Xhap12_4578:HG2_PB_SVrefine2Falcon1plusDovetail_9843:HG4_PB_SVrefine2PBcRDovetail_3138:HG2_PB_SVrefine2Falcon2Bionano_3130:HG3_PB_SVrefine2Falcon1Dovetail_3905:HG3_Ill_SVrefine2DISCOVARDovetail_4779:HG2_Ill_SVrefine2DISCOVARplusDovetail_10727;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_manta_1814:HG3_Ill_manta_1494:HG4_Ill_GATKHCSBGrefine_4451:HG4_Ill_GATKHC_10604:HG4_Ill_SVrefine2DISCOVARDovetail_4660;NumExactMatchSVs=5;ClusterMaxShiftDist=0.173184;ClusterMaxSizeDiff=0.167598;ClusterMaxEditDist=0.217391;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=170;DistBack=8;DistForward=59619;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=332;REFWIDENED=5:155850170-155850501;PctSeqSimilarity=0.9856;PctSizeSimilarity=0.9714;PctRecOverlap=0.9771;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=97;MatchId=4519.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:61:1/1:2:39:4:19:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr5	156846984	HG2_PB_SVrefine2PB10Xhap12_4580	A	GCCCGGCCAGCCGCCCGTCCGGAGGTGGGGGCCCTGCCCCGCCCAGTCTGAGAATGAGGAGACCTCCGCTGCAGCCCCCGTCTGAGAGGGGGAGCCTCTCCGCCCGGCAGCCGCCCTGTCTGGGAGGTGAGGAGCGTCTCCGCCGGCGGCCACCCATCCGGGAGGGAGGTGGGGTTCAGACCCCCGCCCGGCAAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGTCAGCCCCCACCCGGCCAGCCTCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCATCCAGGAGGGAGGTGGGGGGTCAGCCCCCCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3131:HG4_PB_SVrefine2Falcon1Dovetail_3802:HG2_PB_SVrefine2PB10Xhap12_4580:HG4_PB_pbsv_6274:HG2_PB_PB10Xdip_23362:HG2_PB_pbsv_6258;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4580;NumExactMatchSVs=1;ClusterMaxShiftDist=0.145015;ClusterMaxSizeDiff=0.138138;ClusterMaxEditDist=0.29661;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=327;DistBack=27;DistForward=24;DistMin=24;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=316;REFWIDENED=5:156846684-156846999;PctSeqSimilarity=0.9621;PctSizeSimilarity=0.9397;PctRecOverlap=0.5415;SizeDiff=-21;StartDistance=149;EndDistance=149;GTMatch=0;TruScore=81;MatchId=4520.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:41:0|1:33:2:1:30:./.:0:0:0:0:0/1:13:14:0/1:7:6:.:.:.
chr5	157205829	HG3_PB_SVrefine2Falcon1Dovetail_3906	T	TATATATACAAAAATTAGCCTGTCATGGTGGCGCACACCTGTAGTCCCAGCTACTCAAGAGGCTGAGGTGGAAGGATCTCTTGAGCCTGGGAAGTGGAGGTTGCAGTGAGCCAAGATTGCACCACTGCATTCCAGCCTAGACAGGTAAGACCCTTTCTCAAAAAAAAAGAAAAAACTCAGACCCAGTGCCATAAAATTGTACTCTACTCAGAGTCACTTTAGTATATATTGTACAGAACTGCATAACTGCATATGTTTATACATATATATTGCTGTGTGGGGTTATGAATACAAAACCACGTGCAATTTAAGGAATTTTCAAGGGCAATTCTAATTCCACCCAATATCTGCCATATTCCTGCTTCTACAATCAAACCCACACAGAAACTGCAACTTCACTCTGATACCAGCTCACTAGTTATCATGAGAATTTGATGGAATAATGGCATAAACCTCTGAGCACAGTGCCTGGCACATAGCTGACAGTAAAGGTTACTATAACCACAGTCATAATGTTACTATTATTGTTTTCCATCCAGTAGGGAACTATCAGCTATGAGTGCCTACTCCATGGTTATTATTGATATGATTATCCAAGCGGAGGGAGAGAGGGAGCTATCCCTCCCGCTAGAGTTACTGAGTTTTCATAGAGAAAAATAGGTATTTCAACTGACAGAACCTGAGTCCAGGTGAAGGCCTCCATGGTCCTGGTTGCAGGACTGGCTGGGAGCAGCGTTAGGGGAGGAGAAACAGGCACTAGATGTGCCGAGAGGGTGAAGCAGTTTCCTTTGGTTGGCACATGTGAGAGGAGCTGGAGAATAAAAGCCAGGAAAGGTAGCCCATGGTTAGATAGCCTCAAATACCTGGACTTGATTCAGGTGGGAGTGGGGAGCCATTGATAGTTCAGGAGCTGGGGAGTGATGAACAAGACATTTGAAAAGATGGAGAGGCTAGAAACATGGAAACCAGTGAGGAGGCAACCACAAAACTGTGAGAAGTCATCCTGAGCTCAAATGAGAGCAGAAACAGAGGGAATAGAAAGATACTGGCTGAGGCCGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCACAAGGTTAGAAGATCGAGACCAATCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGTGGGCGCCTGTAGTCCCAGTTACTCGGGAGGCTGAGGCAGGAAAATGGTGTGAACCCGGGAGGCACAGCTTGCAGTGAGCCGAGGTCACACCACTGCACTCCAGCCTGGGCAACAGAGCGACACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAGATACTGGTTGGTTGATTCAGGGCAGTGATAATCCTGTATATTTTCTGAGCAGACTTTGGATATTTTATTGCCTTTTTTTTTTGTTTGTTTTTTTGAGATGGAGTCTCACTCTGTTGCCCAGGCTGGAGTACAATGGCACGGTCTCGGCTCACTGCAACCTCTGTCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACGCCCAGCTAATTTTTTTATTTTTAGTAGAGACAGGGTTTTACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCCACGCCCGGCCCCTGCTGAATTCTTGTATGAATATTGCCATGTTTACATGAACGGTACAACCCATCCTTCCCTACAGAACCACTTACCCCTGTCATTGAACTAATCCGTCAGTTTAAGTTGTTGGTGTTTGGCCTTCCATTTGTAATATGGGCTTATTAGATGAGGTAGTCATGGTGATACTTTTTATATAGTTTTCGGGGGAAATGGGATCTTACATCCCATAAATACAGTAATAATCTCTGTGTAGAATTCAAGGTGATGTTTTCTTTTATTTAACAACTGAGTCACACACAGCTGAGTGCGCTTATGCTTTTATACATTTGATGCCATGAGTTCTTTGAGAGACAACCATAATTCTCAGTTTGTGATAGCACACCACATTTGTTATAAATTGTTTTTCTTTGTGGGGAGTAGGTGAGCCTGAATTCCCATTTTCTTAACTTACTCCCATGGTGTGCATCTTCCTTTATTTTCTAGCCATGAAATGAATAAAAAAAAAATAAGAAGTAATGAAGTCTAACGGCTTACTGAGCTTTCCCCTTGAAAAGGCCAAGGCGAGAAAATGGAATCCATTAAAGACCCTGTGTCGAGGTAAGGAGAACAGAAATAAAAAATAAGCCAAGGCTGGGCGTGGTGGCTCACACCTGTAATCCCAGAATTTTGGGAAGCCGAGGCGGGTGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCTGTCTCTACTACAAATACAAAATTAGCCAGGCATAGTGGTGCATGCCTGTAATTCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGAGGAGGAGGTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAAGAAGAGCAAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAGCCAAATGACAGTTCTTCACAATTAAACACAAAATTGCTATATGACCCAGCAATTCCACTTCTGGGTGTACACCCAAAATAATTGAAAGCAGGGACTTCAACAGATATTTGTATACCCATGTTCATAGCAGCATTACTGACATAGCCAGAAAGTGGAAGCAACTCAAATATCCATTGATGGACGAATGGATAAACAAAATGTGGTGTATTCATTCAATGGAATATTACACAGACTTGACAAGGAATGAAATTCTAGGCTGGGTGTGGGGGCTCATGCCTGTAGTCCCGGCACTTTAGGATGCTGAGGCGGGTGGATCACCAGAGGTCAGGAGTTCGAGACCAGCCTGGACAAATTGGTGAAACCCTGTCTCTGCTAAAAAAAAAAATACAAAAAATTGGCCAGGCGCGGTGGCTCACGCCTGTGATTCCAGCACTTTGGGAGGCCAAGGTGGATGGATGATGAGGTCAGGAGACTGAGACCATCCTGGTCAACATGGTGAAACCCCATCTCTACTAAAAATAAATAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9844:HG2_PB_pbsv_6259:HG2_PB_PB10Xdip_23363:HG2_PB_HySA_11686:HG2_Ill_breakscan11_3634:HG4_PB_HySA_9349:HG3_PB_assemblyticsfalcon_22079:HG2_Ill_SVrefine2DISCOVARplusDovetail_10732:HG2_PB_SVrefine2Falcon2Bionano_3132:HG2_PB_SVrefine2PBcRplusDovetail_9181:HG3_Ill_SVrefine2DISCOVARDovetail_4783:HG3_PB_SVrefine2PBcRDovetail_2898:HG2_PB_SVrefine2PB10Xhap12_4581:HG3_PB_SVrefine2Falcon1Dovetail_3906:HG4_PB_SVrefine2Falcon1Dovetail_3803:HG4_Ill_SVrefine2DISCOVARDovetail_4668:HG4_PB_SVrefine2PBcRDovetail_3139:HG2_PB_assemblyticsfalcon_22152;NumClusterSVs=18;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_3906;NumExactMatchSVs=1;ClusterMaxShiftDist=0.137678;ClusterMaxSizeDiff=0.137678;ClusterMaxEditDist=0.25012;PBcalls=14;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=3185;DistBack=146773;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=179;REFWIDENED=5:157205830-157206008;PctSeqSimilarity=0.9966;PctSizeSimilarity=1;PctRecOverlap=0.9736;SizeDiff=0;StartDistance=-84;EndDistance=-84;GTMatch=0;TruScore=99;MatchId=4521.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:1/1:1:19:1:21:./.:0:0:0:0:1/1:0:15:1/1:4:411:.:2939:.
chr5	157585864	HG3_Ill_250bpfermikitraw_8537	C	CATATATATATATATATATATATATATGTGCATATATATATATATATGCACATATAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3804:HG3_PB_pbsv_6074:HG2_PB_PB10Xdip_23364:HG2_PB_HySA_11688:HG2_PB_pbsv_6260:HG4_Ill_manta_1583:HG4_PB_pbsv_6276:HG4_Ill_GATKHC_10615:HG4_Ill_GATKHCSBGrefine_4455:HG4_Ill_250bpfermikitraw_8914:HG2_PB_assemblyticsfalcon_22155:HG2_Ill_Krunchall_9035:HG3_Ill_manta_1496:HG3_Ill_Spiral_6936:HG3_Ill_GATKHC_10505:HG3_Ill_GATKHCSBGrefine_4301:HG3_Ill_250bpfermikitraw_8537:HG2_Ill_GATKHC_10533:HG2_Ill_GATKHCSBGrefine_4398:HG2_Ill_250bpfermikitraw_8848:HG2_Ill_150bpfermikitraw_8306;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8306:HG2_Ill_250bpfermikitraw_8848:HG2_Ill_GATKHCSBGrefine_4398:HG2_Ill_GATKHC_10533:HG3_Ill_250bpfermikitraw_8537:HG3_Ill_GATKHCSBGrefine_4301:HG3_Ill_GATKHC_10505:HG3_Ill_Spiral_6936:HG3_Ill_manta_1496;NumExactMatchSVs=9;ClusterMaxShiftDist=0.156522;ClusterMaxSizeDiff=0.156522;ClusterMaxEditDist=0.316667;PBcalls=7;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=9;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=5:157585865-157585872;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:47:0|1:27:1:2:42:./.:0:0:0:0:0/1:27:16:./.:.:.:.:.:.
chr5	157736888	HG4_PB_SVrefine2PBcRDovetail_3140	T	TTCCTTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCTTCCCTTCCCTACCTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCTCCCTTCCCTACCTCCCTCCCTCCTTCCTCCTCCCTTCCTCCCTCCCTCCTCCTTCCTTCCTACCTCCCTCCTCACTTCCTCCTCCCTTCCTCCCCCCTCCCTCCTTCCCTTCCCTACCTCCCTCCTCACTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCTCTTCCCTCCCTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCTTCCCTCCCTACCTCCTCCCTCCCTTCCTCCCCCTTCCTCCCTCCCTCCCTCCTTCCCTTCCCTACCTCCCTTCCTCACTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCCCTTCCCTACCTCCCTTCCTCACTTCCTCCTCCCTTCCCCTCCCTCCCTCCTTCCCTCCCTACCTCCCTCCCTCCTTCCTCCCTCCCTCCTCCCTCCCTCCCTCCTTCCTTCCCTACCTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCCCTTCCCTACC	10	PASS	ClusterIDs=HG4_PB_pbsv_6277:HG4_PB_SVrefine2PBcRDovetail_3140:HG2_PB_SVrefine2Falcon2Bionano_3133:HG2_PB_SVrefine2Falcon1plusDovetail_9845:HG2_PB_SVrefine2PB10Xhap12_4582:HG3_PB_assemblyticsfalcon_22082:HG3_PB_SVrefine2Falcon1Dovetail_3908:HG2_PB_SVrefine2PBcRplusDovetail_9182;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_3140;NumExactMatchSVs=1;ClusterMaxShiftDist=0.181504;ClusterMaxSizeDiff=0.181504;ClusterMaxEditDist=0.299632;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=593;DistBack=-379;DistForward=5;DistMin=-379;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=406;REFWIDENED=5:157736889-157737294;PctSeqSimilarity=0.9357;PctSizeSimilarity=0.9511;PctRecOverlap=0.629;SizeDiff=29;StartDistance=-206;EndDistance=-206;GTMatch=1;TruScore=83;MatchId=4523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:1:21:3:16:./.:0:0:0:0:./.:6:1:0/1:5:14:.:593:.
chr5	158717157	HG4_Ill_MetaSV_4316	A	AGAACCTGATTTATTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3134:HG2_PB_PB10Xdip_23369:HG4_PB_pbsv_6280:HG2_PB_pbsv_6264:HG3_PB_HySA_9698:HG3_PB_pbsv_6077:HG2_PB_SVrefine2Falcon1plusDovetail_9847:HG2_PB_assemblyticsfalcon_22161:HG3_PB_assemblyticsfalcon_22086:HG2_PB_HySA_11696:HG4_PB_HySA_9358:HG2_Ill_GATKHCSBGrefine_4400:HG2_PB_SVrefine2PBcRplusDovetail_9183:HG4_Ill_SVrefine2DISCOVARDovetail_4674:HG4_Ill_MetaSV_4316:HG4_Ill_GATKHCSBGrefine_4458:HG3_PB_SVrefine2PBcRDovetail_2901:HG3_PB_SVrefine2Falcon1Dovetail_3910:HG2_Ill_SVrefine2DISCOVARplusDovetail_10738:HG2_10X_SVrefine210Xhap12_4525:HG2_Ill_MetaSV_4155:HG3_Ill_MetaSV_4324:HG3_Ill_manta_1497:HG4_PB_SVrefine2PBcRDovetail_3143:HG4_PB_SVrefine2Falcon1Dovetail_3808:HG2_PB_SVrefine2PB10Xhap12_4583:HG2_Ill_breakscan11_3635;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4525:HG2_Ill_SVrefine2DISCOVARplusDovetail_10738:HG3_PB_SVrefine2Falcon1Dovetail_3910:HG3_PB_SVrefine2PBcRDovetail_2901:HG4_Ill_GATKHCSBGrefine_4458:HG4_Ill_MetaSV_4316:HG4_Ill_SVrefine2DISCOVARDovetail_4674;NumExactMatchSVs=7;ClusterMaxShiftDist=0.175549;ClusterMaxSizeDiff=0.175549;ClusterMaxEditDist=0.257862;PBcalls=17;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=312;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=5:158717158-158717172;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4524.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:26:0:27:./.:0:0:0:0:1/1:0:37:1/1:1:100:.:.:.
chr5	158851339	HG2_Ill_svaba_8104	A	AGAGTCAAGGATTAACTGTACAGTTAGGGACACAGCAGCCATGGCAAAACTTACTGAGAAATGGCC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8311:HG2_PB_pbsv_6265:HG4_PB_HySA_9359:HG2_PB_HySA_11697:HG4_Ill_svaba_8208:HG4_Ill_SVrefine2DISCOVARDovetail_4675:HG4_Ill_Krunchall_9352:HG4_Ill_GATKHC_10623:HG4_Ill_GATKHCSBGrefine_4459:HG4_Ill_250bpfermikitraw_8920:HG2_Ill_svaba_8104:HG2_Ill_SVrefine2DISCOVARplusDovetail_10739:HG2_Ill_Krunchall_9040:HG2_Ill_GATKHC_10540:HG2_Ill_GATKHCSBGrefine_4401:HG2_Ill_250bpfermikitraw_8853;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8311:HG4_Ill_svaba_8208:HG4_Ill_SVrefine2DISCOVARDovetail_4675:HG4_Ill_Krunchall_9352:HG4_Ill_GATKHC_10623:HG4_Ill_GATKHCSBGrefine_4459:HG4_Ill_250bpfermikitraw_8920:HG2_Ill_svaba_8104:HG2_Ill_SVrefine2DISCOVARplusDovetail_10739:HG2_Ill_Krunchall_9040:HG2_Ill_GATKHC_10540:HG2_Ill_GATKHCSBGrefine_4401:HG2_Ill_250bpfermikitraw_8853;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.147059;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=1;DistForward=65;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=65;REFWIDENED=5:158851340-158851404;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:0|1:29:3:2:16:./.:0:0:0:0:0/1:13:22:./.:.:.:.:.:.
chr5	159320304	HG4_Ill_Cortex_3031	A	GGCGTCCAAGGGTTTGCCTCGGGCTGCAGTGCTAAGCAAGCTGAACTAAAAGTTGAGTATATCTTGATAATCTGTGGAGACAACTCAAAGGAGGAAAGTGGAGAGGCTCTAACAGACCCAGGCTATGTAGAAAGATTTTCAGAAGAACCAGTTAAGCCTGGGGTCGAATCCCAGCTCTGCCAGAT	20	PASS	ClusterIDs=HG2_PB_HySA_11699:HG2_PB_SVrefine2Falcon1plusDovetail_9848:HG4_PB_SVrefine2PBcRDovetail_3144:HG4_PB_SVrefine2Falcon1Dovetail_3809:HG4_Ill_manta_1584:HG4_Ill_SVrefine2DISCOVARDovetail_4676:HG4_Ill_Cortex_3031:HG2_PB_SVrefine2Falcon2Bionano_3136:HG2_Ill_manta_1816:HG2_Ill_SpiralSDKrefine_14131:HG2_Ill_SVrefine2DISCOVARplusDovetail_10741:HG2_Ill_Cortex_7346:HG2_10X_SVrefine210Xhap12_4526:HG2_Ill_breakscan11_3636:HG4_PB_HySA_9361:HG2_PB_pbsv_6266:HG4_PB_pbsv_6283:HG4_Ill_GATKHCSBGrefine_4461:HG2_Ill_GATKHCSBGrefine_4402:HG4_Ill_MetaSV_4318:HG2_Ill_MetaSV_4156:HG4_Ill_svaba_8210:HG2_Ill_svaba_8107;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4526:HG2_Ill_Cortex_7346:HG2_Ill_SVrefine2DISCOVARplusDovetail_10741:HG2_Ill_SpiralSDKrefine_14131:HG2_Ill_manta_1816:HG2_PB_SVrefine2Falcon2Bionano_3136:HG4_Ill_Cortex_3031:HG4_Ill_SVrefine2DISCOVARDovetail_4676:HG4_Ill_manta_1584:HG4_PB_SVrefine2Falcon1Dovetail_3809:HG4_PB_SVrefine2PBcRDovetail_3144;NumExactMatchSVs=11;ClusterMaxShiftDist=0.130435;ClusterMaxSizeDiff=0.119565;ClusterMaxEditDist=0.198391;PBcalls=8;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=184;DistBack=0;DistForward=64993;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:159320305-159320303;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9946;PctRecOverlap=0.9892;SizeDiff=1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=4526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:24:0|1:34:4:0:20:./.:0:0:0:0:0/1:35:15:./.:.:.:.:.:.
chr5	160435664	HG2_PB_HySA_11719	T	TTAGTGCTCATATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTACATTTTATGTTATGTATATTTTACCACAGTTAAAACGACAACAAAAATAACTGAATGTGGAAGCAAGATTAAAAGTAGGGAGAGTTAAAGATGAAGCCTGGATGAGGTTAGTGCACAAATATTATATCTTTTTTTTTTTTTTTTTTTGTTTGGTTTACACTATGTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTATTATACTCTCAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATATCTCCCAATGCTATCCTCCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTAATATGTGCCACATTTTCTTAATCCAGACTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCGCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGGGTATATACCCAAAGGACTATAAATCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3637:HG4_PB_pbsv_6290:HG2_PB_PB10Xdip_23374:HG3_PB_pbsv_6082:HG2_PB_pbsv_6272:HG3_PB_HySA_9714:HG4_PB_assemblyticsfalcon_21646:HG4_PB_SVrefine2Falcon1Dovetail_3815:HG2_PB_SVrefine2PB10Xhap12_4589:HG2_PB_HySA_11719:HG2_Ill_MetaSV_4159:HG3_PB_SVrefine2PBcRDovetail_2904:HG3_PB_SVrefine2Falcon1Dovetail_3916;NumClusterSVs=13;ExactMatchIDs=HG2_PB_HySA_11719;NumExactMatchSVs=1;ClusterMaxShiftDist=0.144869;ClusterMaxSizeDiff=0.143528;ClusterMaxEditDist=0.187186;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=763;DistBack=-1;DistForward=7;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:160435665-160435678;PctSeqSimilarity=0.9921;PctSizeSimilarity=0.9869;PctRecOverlap=0.9869;SizeDiff=10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:40:./.:10:13:13:12:./.:0:0:0:0:./.:31:3:0/1:17:56:.:.:.
chr5	160531493	HG3_Ill_GATKHCSBGrefine_4310	T	TAGAATAAAATCATTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4590:HG2_PB_PB10Xdip_23375:HG2_PB_HySA_11721:HG3_PB_pbsv_6083:HG2_PB_SVrefine2PBcRplusDovetail_9188:HG3_PB_assemblyticsfalcon_22097:HG3_PB_HySA_9716:HG2_Ill_breakscan11_3638:HG2_PB_pbsv_6273:HG3_PB_SVrefine2Falcon1Dovetail_3917:HG2_PB_SVrefine2Falcon2Bionano_3140:HG3_PB_SVrefine2PBcRDovetail_2905:HG3_Ill_MetaSV_4327:HG3_Ill_GATKHCSBGrefine_4310:HG2_PB_SVrefine2Falcon1plusDovetail_9852;NumClusterSVs=15;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_4310:HG3_Ill_MetaSV_4327;NumExactMatchSVs=2;ClusterMaxShiftDist=0.135593;ClusterMaxSizeDiff=0.135593;ClusterMaxEditDist=0.270893;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=323;DistBack=605;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=5:160531494-160531510;PctSeqSimilarity=0.9501;PctSizeSimilarity=0.9048;PctRecOverlap=0.9048;SizeDiff=-34;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=91;MatchId=4529.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:42:0|1:19:0:0:33:./.:0:0:0:0:0/1:21:5:0/1:6:28:.:.:.
chr5	161634369	HG2_PB_pbsv_6274	G	GGCCATGTGTTCACTCTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGTCGCGACTGCGGACTGCAGCCCGGCGCAATCCGCTCCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGGCCTCAGCCTCCCGAGTAGCTTGGAACTACAGGCCGCCGCACCGCCGCCCCCGGCTTAATTTTTTGTATTTTTAGTAGAGACAGGGATTCCCTTAAGTTAACGCCAGGATGTTTCTCGATCTCCTACCCTCATGATCCACCCGCCCTCGGCAACTCCCACAATAGTGCTGGGATTACAGCGTGAGCCAACCGAACGCGCC	20	PASS	ClusterIDs=HG3_PB_HySA_9723:HG3_PB_pbsv_6084:HG3_Ill_MetaSV_4329:HG2_PB_SVrefine2Falcon1plusDovetail_9853:HG2_PB_pbsv_6274:HG2_PB_SVrefine2PB10Xhap12_4591:HG2_PB_PB10Xdip_23376;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_6274;NumExactMatchSVs=1;ClusterMaxShiftDist=0.139969;ClusterMaxSizeDiff=0.139969;ClusterMaxEditDist=0.223529;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=343;DistBack=-1;DistForward=13;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:161634370-161634385;PctSeqSimilarity=0.9318;PctSizeSimilarity=0.9534;PctRecOverlap=0.9534;SizeDiff=16;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=94;MatchId=4530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:33:0|1:25:0:0:32:./.:0:0:0:0:0/1:28:6:0/1:9:4:.:.:.
chr5	161748163	HG4_Ill_svaba_8227	T	TAGCTCCAAAATTAGACATCATGCCAATCATAGTTTTTTTACTACTTCATAACACCCTGAATACCAGAACACCAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23377:HG4_Ill_Cortex_3039:HG3_Ill_Cortex_3059:HG2_Ill_Cortex_7351:HG4_PB_pbsv_6291:HG3_PB_pbsv_6085:HG2_PB_pbsv_6275:HG2_PB_HySA_11729:HG4_PB_assemblyticsfalcon_21655:HG4_Ill_svaba_8227:HG4_Ill_manta_1588:HG4_Ill_Krunchall_9384:HG4_Ill_GATKHC_10650:HG4_Ill_GATKHCSBGrefine_4468:HG4_Ill_250bpfermikitraw_8949:HG4_Ill_150bpfermikitraw_8556:HG3_PB_assemblyticsfalcon_22106:HG3_Ill_svaba_8228:HG3_Ill_manta_1500:HG3_Ill_Spiral_6960:HG3_Ill_Krunchall_8852:HG3_Ill_GATKHC_10541:HG3_Ill_GATKHCSBGrefine_4311:HG3_Ill_250bpfermikitraw_8567:HG3_Ill_150bpfermikitraw_8387:HG2_Ill_svaba_8121:HG2_Ill_manta_1820:HG2_Ill_SpiralSDKrefine_14146:HG2_Ill_Krunchall_9065:HG2_Ill_GATKHC_10570:HG2_Ill_GATKHCSBGrefine_4410:HG2_Ill_250bpfermikitraw_8879:HG2_Ill_150bpfermikitraw_8332;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8332:HG2_Ill_250bpfermikitraw_8879:HG2_Ill_GATKHCSBGrefine_4410:HG2_Ill_GATKHC_10570:HG2_Ill_Krunchall_9065:HG2_Ill_SpiralSDKrefine_14146:HG2_Ill_manta_1820:HG2_Ill_svaba_8121:HG3_Ill_150bpfermikitraw_8387:HG3_Ill_250bpfermikitraw_8567:HG3_Ill_GATKHCSBGrefine_4311:HG3_Ill_GATKHC_10541:HG3_Ill_Krunchall_8852:HG3_Ill_Spiral_6960:HG3_Ill_manta_1500:HG3_Ill_svaba_8228:HG3_PB_assemblyticsfalcon_22106:HG4_Ill_150bpfermikitraw_8556:HG4_Ill_250bpfermikitraw_8949:HG4_Ill_GATKHCSBGrefine_4468:HG4_Ill_GATKHC_10650:HG4_Ill_Krunchall_9384:HG4_Ill_manta_1588:HG4_Ill_svaba_8227:HG4_PB_assemblyticsfalcon_21655;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0789474;ClusterMaxSizeDiff=0.0526316;ClusterMaxEditDist=0.197368;PBcalls=7;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=5:161748162-161748165;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4531.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:1/1:0:29:0:42:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr5	162231942	HG2_Ill_MetaSV_4162	C	CGTACATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTAACT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3920:HG2_PB_pbsv_6277:HG4_Ill_MetaSV_4321:HG4_Ill_GATKHCSBGrefine_4470:HG2_Ill_MetaSV_4162:HG2_Ill_GATKHCSBGrefine_4412:HG2_PB_SVrefine2Falcon1plusDovetail_9855:HG4_PB_pbsv_6295:HG2_Ill_breakscan11_3639:HG3_PB_assemblyticsfalcon_22112:HG2_10X_SVrefine210Xhap12_4540:HG2_PB_SVrefine2Falcon2Bionano_3143;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4412:HG2_Ill_MetaSV_4162:HG4_Ill_GATKHCSBGrefine_4470:HG4_Ill_MetaSV_4321;NumExactMatchSVs=4;ClusterMaxShiftDist=0.135703;ClusterMaxSizeDiff=0.135703;ClusterMaxEditDist=0.200323;PBcalls=6;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=315;DistBack=1381;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:162231938-162231951;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4532.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:44:34:0|1:41:2:0:26:./.:0:0:0:0:0/1:26:7:0/1:6:37:.:.:.
chr5	162819848	HG2_Ill_GATKHCSBGrefine_4414	T	TAAAAATGGCCATCCTGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAAATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_11743:HG2_PB_pbsv_6281:HG4_PB_pbsv_6298:HG4_PB_assemblyticsfalcon_21664:HG4_PB_SVrefine2Falcon1Dovetail_3820:HG4_Ill_SVrefine2DISCOVARDovetail_4689:HG4_Ill_MetaSV_4322:HG4_Ill_GATKHCSBGrefine_4472:HG2_Ill_MetaSV_4163:HG2_Ill_GATKHCSBGrefine_4414:HG4_PB_SVrefine2PBcRDovetail_3152:HG2_PB_SVrefine2Falcon1plusDovetail_9858:HG4_PB_HySA_9380;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4414:HG2_Ill_MetaSV_4163:HG4_Ill_GATKHCSBGrefine_4472:HG4_Ill_MetaSV_4322:HG4_Ill_SVrefine2DISCOVARDovetail_4689:HG4_PB_SVrefine2Falcon1Dovetail_3820;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0670391;ClusterMaxSizeDiff=0.0558659;ClusterMaxEditDist=0.127072;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=176;DistBack=-1;DistForward=14;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=5:162819849-162819864;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4533.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:29:0|1:29:0:2:27:./.:0:0:0:0:0/1:30:5:./.:.:.:.:.:.
chr5	166110233	HG2_Ill_scalpel_6280	A	ATATGTCCCATATATATATGTCCCATATATATGTATGTCCCATATATATATGTCCCATATATATGTATGTCCCATATATATG	20	PASS	ClusterIDs=HG2_Ill_scalpel_6280:HG4_PB_pbsv_6312;NumClusterSVs=2;ExactMatchIDs=HG2_Ill_scalpel_6280;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0372671;ClusterMaxSizeDiff=0.0372671;ClusterMaxEditDist=0.173913;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=81;DistBack=-1;DistForward=112;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=142;REFWIDENED=5:166110172-166110313;PctSeqSimilarity=0.941;PctSizeSimilarity=0.9529;PctRecOverlap=0.2706;SizeDiff=-4;StartDistance=60;EndDistance=60;GTMatch=0;TruScore=72;MatchId=4535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:47:1/1:2:13:1:9:./.:0:0:0:0:1/1:1:25:./.:.:.:.:.:.
chr5	167655153	HG2_Ill_SVrefine2DISCOVARplusDovetail_10782	A	ATCTGTTACCACAGAGTGGGAGGGGATATACACTTTCCTCACAGAGCTGAGAAAGTTTC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_8933:HG2_PB_HySA_11798:HG3_PB_HySA_9784:HG3_Ill_SVrefine2DISCOVARDovetail_4833:HG2_PB_pbsv_6307:HG3_Ill_Krunchall_8908:HG3_Ill_GATKHC_10611:HG3_Ill_250bpfermikitraw_8629:HG2_Ill_SVrefine2DISCOVARplusDovetail_10782:HG2_Ill_GATKHC_10628;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8933:HG3_Ill_SVrefine2DISCOVARDovetail_4833:HG3_Ill_Krunchall_8908:HG3_Ill_GATKHC_10611:HG3_Ill_250bpfermikitraw_8629:HG2_Ill_SVrefine2DISCOVARplusDovetail_10782:HG2_Ill_GATKHC_10628;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.209677;PBcalls=3;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=42173;DistForward=53;DistMin=53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=116;REFWIDENED=5:167655154-167655269;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4537.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:20:0|1:18:1:1:18:./.:0:0:0:0:0/1:19:16:./.:.:.:.:.:.
chr5	169261424	HG2_PB_PB10Xdip_23403	C	CCCTACTCACAGCTCAGTCAGTGCTCTCCAGCTAAATGTCCCAACCAGGTCACCCTGCAGTAAGCTCACAGACCACAAGT	20	PASS	ClusterIDs=HG4_Ill_GATKHC_10720:HG2_PB_HySA_11814:HG2_PB_PB10Xdip_23403:HG4_PB_pbsv_6323:HG4_PB_HySA_9447;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_23403;NumExactMatchSVs=1;ClusterMaxShiftDist=0.118343;ClusterMaxSizeDiff=0.106509;ClusterMaxEditDist=0.2;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=79;DistBack=-343;DistForward=108;DistMin=-343;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=880;REFWIDENED=5:169260888-169261767;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9875;PctRecOverlap=0.9753;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4538.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:40:0|1:22:6:3:27:./.:0:0:0:0:./.:5:0:./.:.:.:.:.:.
chr5	169598752	HG3_Ill_SVrefine2DISCOVARDovetail_4841	ATCA	TCCTGTCTCAGGAGACGATGGCCTTGGTATGCCCATGGGAGAGGGCTCCTGTGGGTTTGGGAGAGGGAGAGGGGAAAGGTGGTTTTCAACCCAGGGGATGTTTGTCAGTGTCTGGAGTCATTTTTGGTCATTGTGACTCTGGGGGCATGGGGAGGTCATGGCATCTAGTGGCAGAGGCATGGATGCAGCTACACACCCTACAGTGCATGAGACAGCCTCCCACAGCCACAGAG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4169:HG3_PB_assemblyticsfalcon_22164:HG3_Ill_SVrefine2DISCOVARDovetail_4841:HG2_PB_SVrefine2Falcon2Bionano_3160:HG2_PB_SVrefine2Falcon1plusDovetail_9878:HG4_PB_SVrefine2Falcon1Dovetail_3837:HG2_PB_pbsv_6314:HG4_PB_pbsv_6325;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9878:HG2_PB_SVrefine2Falcon2Bionano_3160:HG3_Ill_SVrefine2DISCOVARDovetail_4841:HG3_PB_assemblyticsfalcon_22164;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0712788;ClusterMaxSizeDiff=0.067086;ClusterMaxEditDist=0.195426;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=229;DistBack=-3;DistForward=-1;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=5:169598756-169598751;PctSeqSimilarity=0.9957;PctSizeSimilarity=1;PctRecOverlap=0.9871;SizeDiff=0;StartDistance=-2;EndDistance=1;GTMatch=0;TruScore=99;MatchId=4539.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:55:./.:24:12:4:23:./.:0:0:0:0:0/1:36:14:./.:.:.:.:.:.
chr5	170181111	HG2_PB_SVrefine2PBcRplusDovetail_9212	C	CTGGCTGGCTGGATGGATGGATGGGTGGATGGATGGGTGGGTGAATGGATGAATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGCATGGATGGATGGATGGATGCATGCATGCATGGAGGAATGGGTGGGTGGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3163:HG3_PB_pbsv_6124:HG4_PB_HySA_9458:HG2_PB_pbsv_6318:HG2_Ill_breakscan11_3643:HG2_PB_PB10Xdip_23407:HG4_PB_pbsv_6330:HG2_PB_SVrefine2PB10Xhap12_4624:HG3_PB_SVrefine2PBcRDovetail_2931:HG3_PB_SVrefine2Falcon1Dovetail_3940:HG2_PB_SVrefine2PBcRplusDovetail_9212;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9212:HG3_PB_SVrefine2Falcon1Dovetail_3940:HG3_PB_SVrefine2PBcRDovetail_2931;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0924092;ClusterMaxSizeDiff=0.0858086;ClusterMaxEditDist=0.219269;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=144;DistBack=22204;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=280;REFWIDENED=5:170181112-170181391;PctSeqSimilarity=0.953;PctSizeSimilarity=0.9231;PctRecOverlap=0.6369;SizeDiff=-12;StartDistance=-51;EndDistance=-51;GTMatch=0;TruScore=83;MatchId=4540.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:3:23:0:13:./.:0:0:0:0:1/1:0:13:./.:.:.:.:.:.
chr5	170201325	HG2_Ill_GATKHCSBGrefine_4446	T	TAGAAAAGTAGAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_9459:HG2_PB_pbsv_6319:HG3_PB_SVrefine2Falcon1Dovetail_3941:HG2_Ill_breakscan11_3644:HG2_PB_SVrefine2Falcon1plusDovetail_9882:HG4_Ill_MetaSV_4330:HG4_Ill_GATKHCSBGrefine_4494:HG2_PB_SVrefine2Falcon2Bionano_3164:HG2_Ill_SVrefine2DISCOVARplusDovetail_10794:HG2_Ill_MetaSV_4171:HG2_Ill_GATKHCSBGrefine_4446:HG2_PB_HySA_11824;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4446:HG2_Ill_MetaSV_4171:HG2_Ill_SVrefine2DISCOVARplusDovetail_10794:HG2_PB_SVrefine2Falcon2Bionano_3164:HG4_Ill_GATKHCSBGrefine_4494:HG4_Ill_MetaSV_4330;NumExactMatchSVs=6;ClusterMaxShiftDist=0.252159;ClusterMaxSizeDiff=0.252159;ClusterMaxEditDist=0.279793;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=310;DistBack=10950;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=5:170201326-170201339;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:26:0|1:39:1:0:22:./.:0:0:0:0:0/1:24:23:0/1:9:43:.:.:.
chr5	173162923	HG3_Ill_SVrefine2DISCOVARDovetail_4860	C	CTGTAAAAATGGCGCAAATGACACTTCAGAAGCTTGTTATGATGATTAAGTAGATGCAAAACACTTGGATACACTAATCACTCCAAATAATACA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8423:HG3_PB_pbsv_6134:HG2_PB_assemblyticsfalcon_22277:HG2_PB_HySA_11843:HG2_PB_pbsv_6329:HG3_PB_SVrefine2Falcon1Dovetail_3947:HG3_Ill_SVrefine2DISCOVARDovetail_4860:HG2_PB_SVrefine2Falcon2Bionano_3171:HG2_PB_SVrefine2Falcon1plusDovetail_9889:HG2_Ill_GATKHCSBGrefine_4453;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8423:HG3_PB_SVrefine2Falcon1Dovetail_3947:HG3_Ill_SVrefine2DISCOVARDovetail_4860:HG2_PB_SVrefine2Falcon2Bionano_3171:HG2_PB_SVrefine2Falcon1plusDovetail_9889:HG2_Ill_GATKHCSBGrefine_4453;NumExactMatchSVs=6;ClusterMaxShiftDist=0.042328;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.198953;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=93;DistBack=-1;DistForward=93;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=99;REFWIDENED=5:173162920-173163018;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:27:0|1:29:0:3:25:./.:0:0:0:0:0/1:15:12:./.:.:.:.:.:.
chr5	173192947	HG3_Ill_GATKHCSBGrefine_4353	A	AAAGCTTCGAAGGGTTCCAGTCCAGCAGGCTCATCACAGTTATTATCGGCCCCTTCTACAGATGAGAAAACTGAGGCTCAGAAAGGTTGAGAGACTTCCCCAAGTCTCCCACAGCTAGTGAGGGGCTAAGCCTCAATTGTAGCCCAGACCAGCCTAATTCCAAGGACCGTGTCCTTTCTTAACAATGCATATCTACCAGGGTGCATTTCTC	20	PASS	ClusterIDs=HG4_PB_HySA_9486:HG3_PB_pbsv_6135:HG4_PB_assemblyticsfalcon_21739:HG2_PB_assemblyticsfalcon_22279:HG2_PB_assemblyticsPBcR_21538:HG2_PB_PB10Xdip_23412:HG2_Ill_breakscan11_3645:HG2_PB_HySA_11844:HG4_PB_SVrefine2Falcon1Dovetail_3849:HG4_Ill_manta_1606:HG4_Ill_SVrefine2DISCOVARDovetail_4742:HG4_Ill_MetaSV_4336:HG4_Ill_GATKHCSBGrefine_4504:HG3_PB_SVrefine2PBcRDovetail_2937:HG3_PB_SVrefine2Falcon1Dovetail_3949:HG3_Ill_manta_1514:HG3_Ill_SVrefine2DISCOVARDovetail_4861:HG3_Ill_MetaSV_4339:HG3_Ill_GATKHCSBGrefine_4353:HG2_PB_SVrefine2PBcRplusDovetail_9219:HG2_PB_SVrefine2PB10Xhap12_4630:HG2_PB_SVrefine2Falcon2Bionano_3172:HG2_PB_SVrefine2Falcon1plusDovetail_9890:HG2_Ill_manta_1837:HG2_Ill_SVrefine2DISCOVARplusDovetail_10809:HG2_Ill_MetaSV_4176:HG2_Ill_GATKHCSBGrefine_4455:HG2_10X_SVrefine210Xhap12_4586:HG2_PB_pbsv_6330;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4586:HG2_Ill_GATKHCSBGrefine_4455:HG2_Ill_MetaSV_4176:HG2_Ill_SVrefine2DISCOVARplusDovetail_10809:HG2_Ill_manta_1837:HG2_PB_SVrefine2Falcon1plusDovetail_9890:HG2_PB_SVrefine2Falcon2Bionano_3172:HG2_PB_SVrefine2PB10Xhap12_4630:HG2_PB_SVrefine2PBcRplusDovetail_9219:HG3_Ill_GATKHCSBGrefine_4353:HG3_Ill_MetaSV_4339:HG3_Ill_SVrefine2DISCOVARDovetail_4861:HG3_Ill_manta_1514:HG3_PB_SVrefine2Falcon1Dovetail_3949:HG3_PB_SVrefine2PBcRDovetail_2937:HG4_Ill_GATKHCSBGrefine_4504:HG4_Ill_MetaSV_4336:HG4_Ill_SVrefine2DISCOVARDovetail_4742:HG4_Ill_manta_1606:HG4_PB_SVrefine2Falcon1Dovetail_3849;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0801887;ClusterMaxSizeDiff=0.0801887;ClusterMaxEditDist=0.174312;PBcalls=15;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=210;DistBack=8;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=5:173192948-173192953;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:1/1:0:44:1:29:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr5	173541255	HG2_PB_SVrefine2Falcon1plusDovetail_9891	G	GCTATCTATCTATCAATCTATCAATCTATCTATCAATCTATCAATCTATCTATCTATCTATCATCTATCTATCAATCTATCAATCTATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCAATCTATCTATCTATCTATCATCTATCTATCTATCAATCTATCAATCTATCTATCTATCCATCTATCTATCTATCTATCTATCATCTATCTATCAATCTATCTATCTATCTATCTATCCATCAATCTATCTATCTATCAATCTATCAATCTATCTATCTATCATCTATCTATCTATCTATCAATCTGTCTATCTATCATCTATCTATCTATCTATCATCTATCTATCTATCTATCAATCTGTCTATCTATCATCTATCTATCTATCATCTATCTATCAATCTATCTATCTATCTATCTATCCATCAATCTATCTATCAATCTATCAATCTATCTATCTATCATCTATCTATCTATCTATCAATCTGTCTATCATCTATCTATCTATCTATCTATCAATCTGTCTATCTATCATCTATCTATCTATCATCTATCTATCTATCATCTATCTATCTATCATCTATCTATCATCTAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10811:HG4_PB_SVrefine2Falcon1Dovetail_3851:HG2_PB_pbsv_6333:HG2_PB_SVrefine2PB10Xhap12_4632:HG2_PB_SVrefine2Falcon1plusDovetail_9892:HG2_PB_HySA_11850:HG3_PB_SVrefine2Falcon1Dovetail_3951:HG4_PB_pbsv_6345:HG2_PB_SVrefine2PB10Xhap12_4631:HG3_PB_SVrefine2Falcon1Dovetail_3950:HG3_Ill_SVrefine2DISCOVARDovetail_4865:HG2_PB_SVrefine2Falcon1plusDovetail_9891:HG2_PB_SVrefine2Falcon2Bionano_3173:HG4_PB_SVrefine2Falcon1Dovetail_3850:HG3_PB_pbsv_6138:HG2_PB_SVrefine2PBcRplusDovetail_9220;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9891:HG3_Ill_SVrefine2DISCOVARDovetail_4865;NumExactMatchSVs=2;ClusterMaxShiftDist=0.289001;ClusterMaxSizeDiff=0.289001;ClusterMaxEditDist=0.315712;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=600;DistBack=16694;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=140;REFWIDENED=5:173541256-173541395;PctSeqSimilarity=0.996;PctSizeSimilarity=0.995;PctRecOverlap=0.9486;SizeDiff=-3;StartDistance=-30;EndDistance=-30;GTMatch=1;TruScore=97;MatchId=4544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:79:1/1:6:27:2:27:./.:0:0:0:0:0/1:4:16:0/1:11:87:.:.:.
chr5	173995492	HG2_Ill_150bpfermikitraw_8434	C	CATATATATACACATATAGATATATATATATATACATATATATACACATATAGATATATATATAT	20	PASS	ClusterIDs=HG3_PB_HySA_9835:HG4_Ill_Krunchall_9497:HG4_Ill_GATKHC_10773:HG4_Ill_GATKHCSBGrefine_4505:HG3_Ill_GATKHC_10687:HG3_Ill_GATKHCSBGrefine_4362:HG2_Ill_GATKHC_10693:HG2_Ill_GATKHCSBGrefine_4459:HG4_Ill_250bpfermikitraw_9058:HG4_Ill_150bpfermikitraw_8661:HG3_Ill_Krunchall_8960:HG3_Ill_250bpfermikitraw_8678:HG3_Ill_150bpfermikitraw_8495:HG2_Ill_Krunchall_9175:HG2_Ill_250bpfermikitraw_8987:HG2_Ill_150bpfermikitraw_8434:HG3_PB_pbsv_6142:HG4_PB_pbsv_6347;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8434:HG2_Ill_250bpfermikitraw_8987:HG2_Ill_Krunchall_9175:HG3_Ill_150bpfermikitraw_8495:HG3_Ill_250bpfermikitraw_8678:HG3_Ill_Krunchall_8960:HG4_Ill_150bpfermikitraw_8661:HG4_Ill_250bpfermikitraw_9058:HG4_Ill_Krunchall_9497;NumExactMatchSVs=9;ClusterMaxShiftDist=0.267717;ClusterMaxSizeDiff=0.267717;ClusterMaxEditDist=0.380952;PBcalls=3;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=16;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=5:173995491-173995494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4545.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:0|1:29:5:1:20:./.:0:0:0:0:0/1:14:24:./.:.:.:.:.:.
chr5	174760789	HG3_PB_SVrefine2Falcon1Dovetail_3954	T	TAAAAATGCCAATTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTTTCTACTAAAAATACAAAAAATTAGCCGGGCGTGTTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGTCACCGCACTCCAACCTGGGAGACACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3646:HG4_PB_pbsv_6350:HG3_PB_pbsv_6145:HG4_PB_HySA_9501:HG2_PB_HySA_11862:HG2_PB_pbsv_6340:HG4_Ill_SVrefine2DISCOVARDovetail_4748:HG4_Ill_MetaSV_4338:HG3_PB_SVrefine2Falcon1Dovetail_3954:HG2_Ill_MetaSV_4177:HG4_PB_SVrefine2Falcon1Dovetail_3857;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_MetaSV_4177:HG3_PB_SVrefine2Falcon1Dovetail_3954:HG4_Ill_MetaSV_4338:HG4_Ill_SVrefine2DISCOVARDovetail_4748;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0432767;ClusterMaxSizeDiff=0.0401855;ClusterMaxEditDist=0.183767;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=-1;DistForward=15;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=5:174760790-174760806;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4546.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:38:1|0:3:21:19:4:./.:0:0:0:0:0/1:31:7:0/1:10:24:.:.:.
chr5	174764927	HG4_Ill_GATKHC_10779	A	AAAAGAGCCTGGTACCTCCCTCCCCTCTCTCATCCTTCCTCTCTCACCATGTGACACCTGCTCCCCTTTATCTTCCACTATGAGTGAAAGCTTCCTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4594:HG2_PB_pbsv_6341:HG4_PB_HySA_9502:HG4_PB_pbsv_6351:HG2_PB_HySA_11863:HG3_PB_pbsv_6146:HG4_PB_SVrefine2Falcon1Dovetail_3858:HG4_Ill_SVrefine2DISCOVARDovetail_4749:HG4_Ill_GATKHC_10779:HG4_Ill_250bpfermikitraw_9061:HG4_Ill_150bpfermikitraw_8664:HG3_PB_SVrefine2Falcon1Dovetail_3955:HG3_Ill_GATKHC_10697:HG3_Ill_250bpfermikitraw_8682:HG2_Ill_SVrefine2DISCOVARplusDovetail_10819:HG2_Ill_Krunchall_9177:HG2_Ill_GATKHC_10699:HG2_Ill_250bpfermikitraw_8990;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4594:HG4_PB_SVrefine2Falcon1Dovetail_3858:HG4_Ill_SVrefine2DISCOVARDovetail_4749:HG4_Ill_GATKHC_10779:HG4_Ill_250bpfermikitraw_9061:HG4_Ill_150bpfermikitraw_8664:HG3_PB_SVrefine2Falcon1Dovetail_3955:HG3_Ill_GATKHC_10697:HG3_Ill_250bpfermikitraw_8682:HG2_Ill_SVrefine2DISCOVARplusDovetail_10819:HG2_Ill_Krunchall_9177:HG2_Ill_GATKHC_10699:HG2_Ill_250bpfermikitraw_8990;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0609137;ClusterMaxSizeDiff=0.0507614;ClusterMaxEditDist=0.213198;PBcalls=7;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=96;DistBack=-1;DistForward=36018;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=98;REFWIDENED=5:174764928-174765025;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4547.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:27:./.:10:15:10:3:./.:0:0:0:0:0/1:16:21:./.:.:.:.:.:.
chr5	175878895	HG4_PB_SVrefine2Falcon1Dovetail_3865	TTTT	ACACATATAATACACATATATATATACAATATATATACATTATATTACACATATATATATACATATATATATACACATATATATATACATATATATATACACATATATATATACATATATATATATATACACATATATATATACATATAATATATATACACATATATATATATATATA	10	PASS	ClusterIDs=HG3_PB_pbsv_6156:HG3_PB_SVrefine2PBcRDovetail_2941:HG4_PB_assemblyticsfalcon_21761:HG4_PB_SVrefine2Falcon1Dovetail_3865:HG2_PB_SVrefine2Falcon1plusDovetail_9900;NumClusterSVs=5;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_3865:HG4_PB_assemblyticsfalcon_21761;NumExactMatchSVs=2;ClusterMaxShiftDist=0.226866;ClusterMaxSizeDiff=0.226866;ClusterMaxEditDist=0.311927;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=174;DistBack=-2;DistForward=78330;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=106;REFWIDENED=5:175878789-175878894;PctSeqSimilarity=0.9234;PctSizeSimilarity=0.8736;PctRecOverlap=0.4663;SizeDiff=22;StartDistance=81;EndDistance=84;GTMatch=0;TruScore=75;MatchId=4548.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:./.:6:13:14:9:./.:0:0:0:0:0/1:4:7:./.:.:.:.:.:.
chr5	176119543	HG3_Ill_250bpfermikitraw_8694	G	GGGAACAGCATTCCAGGCGAGGGAGTGGCAAGTGCCAAGGCCCTAAGGCAGAGCCCGGCATGGCAAACGGACAGGCCA	20	PASS	ClusterIDs=HG2_PB_pbsv_6356:HG2_PB_HySA_11893:HG4_PB_pbsv_6365:HG2_PB_assemblyticsPBcR_21570:HG3_PB_HySA_9862:HG2_PB_PB10Xdip_23448:HG3_PB_SVrefine2PBcRDovetail_2944:HG4_PB_assemblyticsfalcon_21766:HG4_Ill_svaba_8348:HG4_Ill_manta_1608:HG4_Ill_SVrefine2DISCOVARDovetail_4754:HG4_Ill_Krunchall_9513:HG4_Ill_GATKHC_10796:HG4_Ill_GATKHCSBGrefine_4519:HG4_Ill_Cortex_3059:HG4_Ill_250bpfermikitraw_9075:HG4_Ill_150bpfermikitraw_8673:HG3_PB_assemblyticsfalcon_22220:HG3_Ill_svaba_8344:HG3_Ill_manta_1517:HG3_Ill_Spiral_7064:HG3_Ill_Krunchall_8971:HG3_Ill_GATKHC_10711:HG3_Ill_GATKHCSBGrefine_4372:HG3_Ill_Cortex_3077:HG3_Ill_250bpfermikitraw_8694:HG3_Ill_150bpfermikitraw_8507:HG2_PB_SVrefine2PBcRplusDovetail_9230:HG2_PB_SVrefine2PB10Xhap12_4644:HG2_PB_SVrefine2Falcon2Bionano_3181:HG2_PB_SVrefine2Falcon1plusDovetail_9902:HG2_Ill_svaba_8243:HG2_Ill_manta_1840:HG2_Ill_SpiralSDKrefine_14237:HG2_Ill_SVrefine2DISCOVARplusDovetail_10822:HG2_Ill_Krunchall_9188:HG2_Ill_GATKHC_10718:HG2_Ill_GATKHCSBGrefine_4469:HG2_Ill_Cortex_7394:HG2_Ill_250bpfermikitraw_9006:HG2_Ill_150bpfermikitraw_8446:HG2_10X_SVrefine210Xhap12_4600:HG3_PB_pbsv_6160:HG2_Ill_breakscan11_3647;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4600:HG2_Ill_150bpfermikitraw_8446:HG2_Ill_250bpfermikitraw_9006:HG2_Ill_Cortex_7394:HG2_Ill_GATKHCSBGrefine_4469:HG2_Ill_GATKHC_10718:HG2_Ill_Krunchall_9188:HG2_Ill_SVrefine2DISCOVARplusDovetail_10822:HG2_Ill_SpiralSDKrefine_14237:HG2_Ill_manta_1840:HG2_Ill_svaba_8243:HG2_PB_SVrefine2Falcon1plusDovetail_9902:HG2_PB_SVrefine2Falcon2Bionano_3181:HG2_PB_SVrefine2PB10Xhap12_4644:HG2_PB_SVrefine2PBcRplusDovetail_9230:HG3_Ill_150bpfermikitraw_8507:HG3_Ill_250bpfermikitraw_8694:HG3_Ill_Cortex_3077:HG3_Ill_GATKHCSBGrefine_4372:HG3_Ill_GATKHC_10711:HG3_Ill_Krunchall_8971:HG3_Ill_Spiral_7064:HG3_Ill_manta_1517:HG3_Ill_svaba_8344:HG3_PB_assemblyticsfalcon_22220:HG4_Ill_150bpfermikitraw_8673:HG4_Ill_250bpfermikitraw_9075:HG4_Ill_Cortex_3059:HG4_Ill_GATKHCSBGrefine_4519:HG4_Ill_GATKHC_10796:HG4_Ill_Krunchall_9513:HG4_Ill_SVrefine2DISCOVARDovetail_4754:HG4_Ill_manta_1608:HG4_Ill_svaba_8348:HG4_PB_assemblyticsfalcon_21766;NumExactMatchSVs=35;ClusterMaxShiftDist=0.118421;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.2125;PBcalls=14;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=77;DistBack=7961;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=5:176119544-176119546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4549.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:3:30:0:29:./.:0:0:0:0:1/1:0:43:./.:.:.:.:.:.
chr5	177885167	HG4_Ill_250bpfermikitraw_9100	C	CTGAAATACATTAAACAGGTTTAAATATGTGAGGTCATAATGGTACTAAAAACAGAACTCAGTG	20	PASS	ClusterIDs=HG2_Ill_Cortex_7397:HG4_Ill_manta_1611:HG3_Ill_manta_1521:HG3_Ill_Spiral_7071:HG2_PB_assemblyticsfalcon_22348:HG2_PB_SVrefine2Falcon2Bionano_3193:HG2_PB_SVrefine2Falcon1plusDovetail_9920:HG2_Ill_manta_1846:HG2_Ill_SpiralSDKrefine_14253:HG3_PB_pbsv_6188:HG2_PB_HySA_11934:HG4_PB_pbsv_6393:HG4_Ill_GATKHCSBGrefine_4534:HG3_Ill_GATKHC_10738:HG3_Ill_GATKHCSBGrefine_4389:HG2_Ill_GATKHC_10745:HG2_Ill_GATKHCSBGrefine_4481:HG2_PB_PB10Xdip_23492:HG4_Ill_svaba_8370:HG4_Ill_Krunchall_9531:HG4_Ill_250bpfermikitraw_9100:HG4_Ill_150bpfermikitraw_8693:HG3_Ill_svaba_8363:HG3_Ill_Krunchall_8983:HG3_Ill_250bpfermikitraw_8712:HG3_Ill_150bpfermikitraw_8521:HG2_Ill_svaba_8264:HG2_Ill_Krunchall_9202:HG2_Ill_250bpfermikitraw_9027:HG2_Ill_150bpfermikitraw_8466:HG4_PB_assemblyticsfalcon_21795:HG3_PB_assemblyticsfalcon_22251:HG2_PB_assemblyticsPBcR_21607:HG2_PB_pbsv_6383:HG4_Ill_Cortex_3061:HG3_Ill_Cortex_3079;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8466:HG2_Ill_250bpfermikitraw_9027:HG2_Ill_Krunchall_9202:HG2_Ill_svaba_8264:HG3_Ill_150bpfermikitraw_8521:HG3_Ill_250bpfermikitraw_8712:HG3_Ill_Krunchall_8983:HG3_Ill_svaba_8363:HG4_Ill_150bpfermikitraw_8693:HG4_Ill_250bpfermikitraw_9100:HG4_Ill_Krunchall_9531:HG4_Ill_svaba_8370;NumExactMatchSVs=12;ClusterMaxShiftDist=0.190476;ClusterMaxSizeDiff=0.190476;ClusterMaxEditDist=0.353846;PBcalls=11;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=63;DistBack=9785;DistForward=12600;DistMin=9785;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=5:177885166-177885168;PctSeqSimilarity=0.9847;PctSizeSimilarity=0.9844;PctRecOverlap=0.9692;SizeDiff=-1;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=97;MatchId=4551.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:27:0:30:./.:0:0:0:0:1/1:0:53:./.:.:.:.:.:.
chr5	178742239	HG4_Ill_Krunchall_9546	C	CTGGCTTCTGGAAAGCACTGAGGCCACAGTTGGCTTCTGGAAAGCACTGAGGCCACAGT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_9041:HG4_PB_pbsv_6409:HG2_PB_pbsv_6396:HG4_PB_HySA_9563:HG3_PB_pbsv_6205:HG4_PB_SVrefine2PBcRDovetail_3181:HG4_Ill_SVrefine2DISCOVARDovetail_4778:HG4_Ill_Krunchall_9546:HG4_Ill_250bpfermikitraw_9120:HG3_PB_SVrefine2Falcon1Dovetail_3993:HG3_Ill_SVrefine2DISCOVARDovetail_4890:HG3_Ill_Krunchall_8995:HG3_Ill_250bpfermikitraw_8724:HG2_PB_assemblyticsfalcon_22371:HG2_PB_SVrefine2PB10Xhap12_4676:HG2_PB_SVrefine2Falcon2Bionano_3202:HG2_Ill_SVrefine2DISCOVARplusDovetail_10843;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9041:HG4_PB_SVrefine2PBcRDovetail_3181:HG4_Ill_SVrefine2DISCOVARDovetail_4778:HG4_Ill_Krunchall_9546:HG4_Ill_250bpfermikitraw_9120:HG3_PB_SVrefine2Falcon1Dovetail_3993:HG3_Ill_SVrefine2DISCOVARDovetail_4890:HG3_Ill_Krunchall_8995:HG3_Ill_250bpfermikitraw_8724:HG2_PB_assemblyticsfalcon_22371:HG2_PB_SVrefine2PB10Xhap12_4676:HG2_PB_SVrefine2Falcon2Bionano_3202:HG2_Ill_SVrefine2DISCOVARplusDovetail_10843;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.245902;PBcalls=9;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=1267;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=87;REFWIDENED=5:178742240-178742326;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4554.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:22:./.:11:4:12:12:./.:0:0:0:0:0/1:17:18:./.:.:.:.:.:.
chr5	179021482	HG2_PB_SVrefine2PBcRplusDovetail_9256	T	TCCGGGCGTGGTGGCTCACACCTGTAATCCCAGCACTCTGGGAGGCCAAGGCAGGCGGATCACGACGTCAGGTGTTCGAGACCAGCCTGGTCAACATAGTGAAATCCCATCTCTACTAAAAATACAAAAAATTAGCTGGGGGTGGTGGCGGGCGCCTGTAGTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATCCCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCGCGCCACTGCACCCCAGCCTGGTGACAGAGCAAGACTCCATCTCAAAAGAAAAAAAAAAAAAAGGAAGAAAAAAATAGGAAGAAAATAGTTTCACCCTCCTGATAAATCATCTATTCTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCGGGTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCCACCACCATGCCCAACTAATTTTTGTATTTTTAGTAGATACGGAGTTTCACCATGTTGGTCAGGATGGTCTCAAACTCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCCCGGCCCATAATTTCCCGTTTTTTAGCTCAATCTTTTCTAGCAATATGCTATTTGGTTTCCAGATACAAGGTGTTTCTAGCTGTTCTTTTGTTATTAATGTCTGATTTTATTACATTAAGGTAAGAGAATACAGTCTGTATGTTATTTTTCAGGAATTTATTAGGACTTTTGTCGTCAGGCTTTTTTTTTTTTTTTTTTTTTTTGAGATAGAGTCTCACGCTGTCGGCCAGGCTGGAGTGCGGTGGCACAATCTTGGCTCACTGCAACCTCTGTCTCCCAGGCTCAGGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATCTGCCACCACGCCTGGCTAAGTTTTGTATTTTTAGTAGAGATGGGGTTTCAGCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTAATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCTACCACGTCCCGCCTATCTTCAGGCTTTTTAAGGGTGTCTCTTGTACACACACAGGAACACACAGTGCCCCCTCCTGGCCACTCTGTGTCTGTCATGGCTAAAAGCTGTACTTAGAGAAAAGCACACAGATGGTGGGTGTGAACCCAGTTGCACCCCTCATTTGCTCTTCACCTTCATCCAGTCGCTTTCTTCTGAGTTTCTCAATGGGAAAAGTGGGGTGAGAGCATCTTCCTTGAGAACCATTCAGGGCTCAGATGAACTAGTGGATGTGCCTGGCACATGGGGACAGCTGGCGAACATTGAGCCTGACCCGACTCTGGAACACGCTGTCAAAAAGGAGCAAAGACTCCCGGACCTCCCCTCTCTACCTTTCCTTCTGTTGACAAAGCTGAGAGCCTTGAGTCAGTTTGTCTTCCAGGGCTCTGGGGAAGAGCAGCAATTGGTAGAATACTCTTGAAAGTGTCACAAAGGTACAAGGTTAACAAATATGG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_2970:HG4_PB_pbsv_6416:HG3_PB_pbsv_6212:HG2_PB_pbsv_6401:HG4_PB_HySA_9575:HG4_PB_HySA_9574:HG2_PB_PB10Xdip_23537:HG2_PB_HySA_11969:HG2_PB_SVrefine2Falcon1plusDovetail_9935:HG4_PB_SVrefine2PBcRDovetail_3186:HG4_Ill_SVrefine2DISCOVARDovetail_4784:HG2_PB_SVrefine2PBcRplusDovetail_9256:HG2_PB_SVrefine2PB10Xhap12_4680:HG2_Ill_SVrefine2DISCOVARplusDovetail_10847:HG2_PB_SVrefine2Falcon2Bionano_3207:HG3_PB_SVrefine2Falcon1Dovetail_3996:HG4_PB_SVrefine2Falcon1Dovetail_3901;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10847:HG2_PB_SVrefine2PB10Xhap12_4680:HG2_PB_SVrefine2PBcRplusDovetail_9256:HG4_Ill_SVrefine2DISCOVARDovetail_4784:HG4_PB_SVrefine2PBcRDovetail_3186;NumExactMatchSVs=5;ClusterMaxShiftDist=0.042176;ClusterMaxSizeDiff=0.0403423;ClusterMaxEditDist=0.184131;PBcalls=15;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=1609;DistBack=14823;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=283;REFWIDENED=5:179021483-179021765;PctSeqSimilarity=0.9953;PctSizeSimilarity=1;PctRecOverlap=0.9397;SizeDiff=0;StartDistance=-97;EndDistance=-97;GTMatch=0;TruScore=97;MatchId=4556.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:83:1/1:0:21:0:29:./.:0:0:0:0:1/1:0:15:./.:15:216:.:1943:.
chr5	179164782	HG4_Ill_GATKHC_10852	T	TCAAGGAATGAGTCTATTAGGTTTTCATTTCTTTTCCTTTTTTCTTGAAACAGGGTCTGGCTCTATCACCCAGTGGCGCGATC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4636:HG4_PB_pbsv_6418:HG2_PB_HySA_11972:HG3_PB_pbsv_6214:HG4_PB_HySA_9581:HG2_PB_pbsv_6405:HG4_PB_SVrefine2PBcRDovetail_3187:HG4_Ill_SVrefine2DISCOVARDovetail_4785:HG4_Ill_Krunchall_9553:HG4_Ill_GATKHC_10852:HG4_Ill_GATKHCSBGrefine_4544:HG4_Ill_250bpfermikitraw_9125:HG3_Ill_SVrefine2DISCOVARDovetail_4893:HG3_Ill_Krunchall_9000:HG3_Ill_GATKHC_10764:HG3_Ill_GATKHCSBGrefine_4401:HG3_Ill_250bpfermikitraw_8732:HG2_Ill_SVrefine2DISCOVARplusDovetail_10849:HG2_Ill_Krunchall_9220:HG2_Ill_GATKHC_10766:HG2_Ill_GATKHCSBGrefine_4491:HG2_Ill_250bpfermikitraw_9047:HG3_PB_HySA_9932;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4636:HG4_Ill_SVrefine2DISCOVARDovetail_4785:HG4_Ill_Krunchall_9553:HG4_Ill_GATKHC_10852:HG4_Ill_GATKHCSBGrefine_4544:HG4_Ill_250bpfermikitraw_9125:HG3_Ill_SVrefine2DISCOVARDovetail_4893:HG3_Ill_Krunchall_9000:HG3_Ill_GATKHC_10764:HG3_Ill_GATKHCSBGrefine_4401:HG3_Ill_250bpfermikitraw_8732:HG2_Ill_SVrefine2DISCOVARplusDovetail_10849:HG2_Ill_Krunchall_9220:HG2_Ill_GATKHC_10766:HG2_Ill_GATKHCSBGrefine_4491:HG2_Ill_250bpfermikitraw_9047;NumExactMatchSVs=16;ClusterMaxShiftDist=0.20915;ClusterMaxSizeDiff=0.207792;ClusterMaxEditDist=0.339869;PBcalls=7;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=82;DistBack=27073;DistForward=51215;DistMin=27073;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:179174530-179164864;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4557.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:13:0|1:23:1:0:9:./.:0:0:0:0:0/1:29:25:./.:.:.:.:.:.
chr5	179729008	HG2_Ill_SVrefine2DISCOVARplusDovetail_10854	G	GGGCCGGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCATCAGGTCAGGAGTTCGAAACCAGCCTGACAAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGGTGCAGTGAGCCAAGATTGCGCCACTGTATTCCAGCCTGGGTGACAGAGCAAGACTCCGTATCAAAAAACATAAATAAATTAATTAATTAAAAAAGTAGGCTTCTACTGTATCTGGTATCTGCAATGTCTTACTACATTTAGATATTTTAAAAGATGAAACAAATATGACAACATGTTAGCAAATGTCAGTTCTGGATGATATGCACATATTCAGATATTCATTATATTCTTTGTATTGTTGTGTATCTTTAAAAGCTTCAAAATAAAATTGTAATAAAACTTCTATTTCTTTGTACTACGAACTGTGTGTTCTTACTTGCTGTGAGATCATAAATTGGTTATTTTCTGGAACATAATACGGCAATATATGTTACGAGTCCAAAATGTTAGATCACAGCTTAATTTGTTAGATTAAGGACAAATCTTCTTTTTTTTTTTTTTTGAGACAGAAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGTGCCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCCAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCAGGACAAATCTTTAATGTGGGACAACACTGTATGTACAAAGATGTTCACTGCTATGTTATTTATGAAGACAAAAATTTGGGAACAGTTTAACTAGTAGAAGATTGGCTAAGTAACCATTAAGAAAATCGTGTTATAAGATTGTGATGGAATATTATGCAATGATTAAATGCTACATATAACAAGCTCATAAAGATGTCAGAAAATACTTGCAATATAATAATAATAAAAGGAAGATGCACACATTTTATCCTTGACATATTAAATAATATTAAAAAAACTCACATGCATAGGAAAAATCCGGACTAAAATATTACATTTGCTAATTGATATTGTCTCTGGGTGATGAGGTTGTTTTTGGTTTTTGGTTTTGAGACAGTCTCACCCTGCTGCCCACGCTGTGCAGTGGTGTGATCCTAGCTCACTGAAGCCTGGAACTCCTGAGCTCAAGTGATCCTTCCACCTCAGCCCCACAAGTAGCTGGGACTCCAGATACATACCACCACATCAGGCTAATTTTTTAAAATTTTTTTGTAGAGGCGGGGTCTTGCTATGTTGCCCAGATTGATCTCAAACTCCTGGCCTCAGGCAATGCTTCCAGCTTGGTCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACCTCACCTGGCCAGGTTATAGTTTAGTGCCATGACCTTCTCTATACATTTTGCAGTTTCCAGCTTGTTTTGGGGGGCGGGGGATGGTATAAGCTACTTTAAAAAGAAAGGGACTTTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4640:HG4_PB_HySA_9596:HG3_PB_pbsv_6223:HG2_PB_pbsv_6415:HG2_PB_PB10Xdip_23606:HG4_PB_pbsv_6429:HG3_PB_HySA_9944:HG2_Ill_Spiral_471:HG4_PB_SVrefine2Falcon1Dovetail_3906:HG2_PB_SVrefine2PB10Xhap12_4690:HG2_PB_SVrefine2PBcRplusDovetail_9265:HG2_PB_SVrefine2Falcon1plusDovetail_9944:HG3_PB_SVrefine2Falcon1Dovetail_3999:HG3_PB_SVrefine2PBcRDovetail_2979:HG3_Ill_SVrefine2DISCOVARDovetail_4898:HG2_Ill_SVrefine2DISCOVARplusDovetail_10854:HG2_PB_HySA_11991:HG4_PB_SVrefine2PBcRDovetail_3194:HG4_Ill_SVrefine2DISCOVARDovetail_4788:HG2_PB_SVrefine2Falcon2Bionano_3214;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10854:HG3_Ill_SVrefine2DISCOVARDovetail_4898;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0428365;ClusterMaxSizeDiff=0.0422576;ClusterMaxEditDist=0.194009;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=1701;DistBack=1816;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=284;REFWIDENED=5:179729009-179729292;PctSeqSimilarity=0.9968;PctSizeSimilarity=1;PctRecOverlap=0.9877;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=99;MatchId=4558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:71:1/1:4:20:1:22:./.:0:0:0:0:1/1:0:34:1/1:11:208:.:2002:.
chr5	180085446	HG2_PB_SVrefine2Falcon2Bionano_3221	C	GGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGCGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGACAGCGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGCGGGACAGCGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGCGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGCGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGCGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGCGGGACAGCGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGCGGGACAGCGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGAACAGCGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGAGAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGCGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGAGGGACAGCGGGACAGAGGGACAGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3221:HG2_PB_assemblyticsPBcR_21650:HG2_PB_SVrefine2PBcRplusDovetail_9272:HG3_PB_pbsv_6238;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3221;NumExactMatchSVs=1;ClusterMaxShiftDist=0.155861;ClusterMaxSizeDiff=0.153714;ClusterMaxEditDist=0.224131;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2220;DistBack=-24;DistForward=-1;DistMin=-24;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=358;REFWIDENED=5:180085447-180085804;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9911;PctRecOverlap=0.9853;SizeDiff=-20;StartDistance=-23;EndDistance=-23;GTMatch=0;TruScore=99;MatchId=4560.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:40:0|1:30:5:2:21:./.:0:0:0:0:0/1:9:6:0/1:60:37:.:3363:.
chr5	180222941	HG4_Ill_GATKHC_10873	A	ACCAGACCACATTACTTGAAAGGATCTGAAACATTCCCCAATTCCCAGCCAGCTGCCATT	20	PASS	ClusterIDs=HG2_PB_HySA_12013:HG4_PB_HySA_9607:HG2_PB_pbsv_6425:HG4_Ill_svaba_8416:HG4_Ill_Krunchall_9564:HG4_Ill_GATKHC_10873:HG4_Ill_GATKHCSBGrefine_4548:HG4_Ill_250bpfermikitraw_9138:HG4_Ill_150bpfermikitraw_8724:HG2_Ill_svaba_8308:HG2_Ill_Krunchall_9235:HG2_Ill_GATKHC_10788:HG2_Ill_GATKHCSBGrefine_4495:HG2_Ill_250bpfermikitraw_9061:HG2_Ill_150bpfermikitraw_8491:HG4_PB_pbsv_6437;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8491:HG2_Ill_250bpfermikitraw_9061:HG2_Ill_GATKHCSBGrefine_4495:HG2_Ill_GATKHC_10788:HG2_Ill_Krunchall_9235:HG2_Ill_svaba_8308:HG4_Ill_150bpfermikitraw_8724:HG4_Ill_250bpfermikitraw_9138:HG4_Ill_GATKHCSBGrefine_4548:HG4_Ill_GATKHC_10873:HG4_Ill_Krunchall_9564:HG4_Ill_svaba_8416;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0806452;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.251969;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=1249;DistForward=57;DistMin=57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=67;REFWIDENED=5:180222942-180223008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:26:0|1:36:1:0:25:./.:0:0:0:0:0/1:20:22:./.:.:.:.:.:.
chr5	180224816	HG4_PB_pbsv_6438	T	TGGACACCGCCTAAGTTCCAGCCCCACCTCCTTCTCACATAGGCTCACCTGTTTTTGCCCATAAGAGGACATGACACGCCCTAGTTTGCCAGCCCACCTCCTTCTTCAACATAGGATCACCTGTTTGCCATAAGAGGACA	10	PASS	ClusterIDs=HG4_PB_pbsv_6438:HG4_PB_HySA_9608:HG4_PB_SVrefine2PBcRDovetail_3198:HG2_PB_HySA_12014;NumClusterSVs=4;ExactMatchIDs=HG4_PB_pbsv_6438;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0942029;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.192857;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=139;DistBack=0;DistForward=26;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=5:180224817-180224817;PctSeqSimilarity=0.9275;PctSizeSimilarity=0.9784;PctRecOverlap=0.7986;SizeDiff=3;StartDistance=-27;EndDistance=-27;GTMatch=0;TruScore=90;MatchId=4562.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:23:0|1:31:2:3:21:./.:0:0:0:0:0/1:23:5:./.:.:.:.:.:.
chr6	515570	HG2_PB_SVrefine2PB10Xhap12_4717	C	CGGCAGTCCTAGGAGGGAGCGAGAAGCCAGAGTGACCGTAATCATACAACGATTTCCAACAACAAAGGAGAGACGCACACAGCTGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4017:HG2_PB_PB10Xdip_25613:HG4_PB_pbsv_6459:HG2_PB_HySA_12035:HG2_PB_pbsv_6444:HG3_PB_SVrefine2PBcRDovetail_2991:HG2_PB_SVrefine2PB10Xhap12_4717;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4717:HG3_PB_SVrefine2PBcRDovetail_2991;NumExactMatchSVs=2;ClusterMaxShiftDist=0.101695;ClusterMaxSizeDiff=0.079096;ClusterMaxEditDist=0.220994;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=85;DistBack=8375;DistForward=138;DistMin=138;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=255;REFWIDENED=6:515571-515825;PctSeqSimilarity=0.9944;PctSizeSimilarity=1;PctRecOverlap=0.9529;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=4564.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:37:0|1:24:0:6:35:./.:0:0:0:0:./.:19:3:./.:.:.:882:1600:.
chr6	1051778	HG4_Ill_SVrefine2DISCOVARDovetail_4808	C	CTTCTTATAAAGCTGCCAGTCCCACTCCGAGGATAACCCATTAATCTATTAATCCAGTCATCCATGAATGGATTAATTCATTCATCAGGGAAGAGCCTTCCTGAAAGATCTCAACTCTCAATATTGCCATGTTGGGGATTAAATTTTAACACGAGTTTTGAAGGGGACAGACATTCAAACCATAGCAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4732:HG4_PB_pbsv_6475:HG4_PB_HySA_9663:HG2_PB_HySA_12062:HG2_PB_PB10Xdip_26029:HG2_PB_PB10Xdip_26028:HG2_PB_SVrefine2PB10Xhap12_4733:HG4_PB_SVrefine2PBcRDovetail_3222:HG2_10X_SVrefine210Xhap12_4665:HG2_PB_HySA_12061:HG2_10X_SVrefine210Xhap12_4664:HG4_PB_SVrefine2Falcon1Dovetail_3938:HG4_Ill_SVrefine2DISCOVARDovetail_4808:HG2_PB_SVrefine2Falcon2Bionano_3234;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3234:HG4_Ill_SVrefine2DISCOVARDovetail_4808:HG4_PB_SVrefine2Falcon1Dovetail_3938:HG4_PB_SVrefine2PBcRDovetail_3222;NumExactMatchSVs=4;ClusterMaxShiftDist=0.269341;ClusterMaxSizeDiff=0.269341;ClusterMaxEditDist=0.305476;PBcalls=11;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=187;DistBack=4676;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=194;REFWIDENED=6:1051779-1051972;PctSeqSimilarity=0.9975;PctSizeSimilarity=1;PctRecOverlap=0.9465;SizeDiff=0;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=98;MatchId=4565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:23:0|1:16:1:0:20:./.:0:0:0:0:0/1:11:11:./.:.:.:.:.:.
chr6	1053939	HG2_10X_SVrefine210Xhap12_4666	C	CCATAGCCACAGCCATAGACACGGCCATCAACACAGACGCAGACATCAACAGCAACGTAGACATAGACATAGTCATTAATGTAGGTATCAACAGCAACATAGACGTAGACATAGACCTAGACATGGCCATAGCCACAGCCATAGACACGGCCATCAACACAGATGCAGACATCAACAGCAACATAGACATAGACATAGTCATCAATGTAGGTATCAACAGCAACATAGAAGTAGATATAGACCTAGACATGGCCATAGCCACAGCCATAGACATGGCCATCAACACAGACGCAGATATCAACAGCAACATAGACATAGACATAGTCATTAATGTAGATATCAACAGCAACATAGAAGTAGACATAGACCTAGACATGGCCATAGCCACAGCCATAGACACGGCCATCAACACAGACACAGACATCAACAGTGACGTAGACATAGCCATAGACATAGCCATAGCCAGAGACACAGACATCAACAGCAACATAGACATAGACATAGTCATTAATGTAGATATCAACAGCAACATAGACGTAGACATAGACTTAGACATGGCCATAGCCACAGCCATAGACATAGCCATCAACACAGACACAGACATCAACAGTGACGTAGACATAGCCATAGACATGGCCATCAACACAGACACAGACATCAACAGCAA	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_4809:HG4_PB_pbsv_6477:HG3_PB_pbsv_6275:HG4_PB_HySA_9664:HG2_PB_pbsv_6464:HG2_PB_PB10Xdip_26031:HG2_PB_PB10Xdip_26030:HG2_PB_HySA_12063:HG3_PB_HySA_10028:HG3_PB_SVrefine2PBcRDovetail_3002:HG4_PB_SVrefine2PBcRDovetail_3223:HG4_PB_SVrefine2Falcon1Dovetail_3939:HG2_PB_SVrefine2PBcRplusDovetail_9298:HG2_PB_SVrefine2PB10Xhap12_4734:HG2_PB_SVrefine2Falcon2Bionano_3235:HG2_Ill_SVrefine2DISCOVARplusDovetail_10873:HG2_10X_SVrefine210Xhap12_4666:HG3_Ill_SVrefine2DISCOVARDovetail_4917:HG2_PB_SVrefine2Falcon1plusDovetail_9976:HG3_PB_SVrefine2Falcon1Dovetail_4032;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4666:HG2_Ill_SVrefine2DISCOVARplusDovetail_10873:HG2_PB_SVrefine2Falcon2Bionano_3235:HG2_PB_SVrefine2PB10Xhap12_4734:HG2_PB_SVrefine2PBcRplusDovetail_9298:HG4_PB_SVrefine2Falcon1Dovetail_3939:HG4_PB_SVrefine2PBcRDovetail_3223;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0512445;ClusterMaxSizeDiff=0.0497804;ClusterMaxEditDist=0.226715;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=666;DistBack=9;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=146;REFWIDENED=6:1053940-1054085;PctSeqSimilarity=0.9926;PctSizeSimilarity=1;PctRecOverlap=0.8861;SizeDiff=0;StartDistance=-76;EndDistance=-76;GTMatch=0;TruScore=95;MatchId=4566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:92:1/1:1:31:1:21:./.:0:0:0:0:1/1:1:26:1/1:2:115:.:.:.
chr6	1125900	HG2_PB_SVrefine2Falcon1plusDovetail_9977	T	TCTGATTTAAAAACACAAAGAACCATCATTCTCACCAAATCTGGGTCCTCACAGCCTGTGTATAAGGGGGAAAGGCCCAGAGAAGTTGCTGATTTAAAAACACAAAGAACCATCATTCTCACCAAATCTGGGTCCTCACAGCCTGTGTATAAGGGGGAAAGGCCCAGAGAAGTTGCTGATTTAAAAACACAAAGAACCATCATTCTCACCAAATCTGGGTCCTCACAGCCTGTGTATAAGGGGAAAGGCCCAGAGAAGTTGCTGATTTAAAAACACAAAGAACCATCATTCTCACCAAATCTAGGTCCTCACAGCCTGTGTATAAGGGGGAAAGGCCCAGAGAAGTTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9977:HG3_PB_pbsv_6277:HG2_PB_pbsv_6466:HG4_PB_SVrefine2Falcon1Dovetail_3940:HG3_PB_SVrefine2Falcon1Dovetail_4033:HG2_PB_SVrefine2Falcon2Bionano_3236;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9977:HG3_PB_SVrefine2Falcon1Dovetail_4033:HG2_PB_SVrefine2Falcon2Bionano_3236;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0747922;ClusterMaxSizeDiff=0.0720222;ClusterMaxEditDist=0.178326;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=347;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=264;REFWIDENED=6:1125901-1126164;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9971;PctRecOverlap=0.6282;SizeDiff=1;StartDistance=-129;EndDistance=-129;GTMatch=0;TruScore=87;MatchId=4568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:36:0|1:27:3:0:20:./.:0:0:0:0:./.:1:4:./.:3:6:.:.:.
chr6	1250808	HG2_10X_SVrefine210Xhap12_4671	T	TTAAAGGTTATAGAGGCAGTAAAAAGTCTGATTTCCTTTGCAAATAAATAATGTGGTAATAGAAAAGAAACGAACTCCTGCACACCAACTAGGGAACATTGAGGTGTTGACCTGTGAGAGAGTGGTGCAGAGAGAGCCCTGTAAGACAGGAAACCTTGCCTTGGCAGGGCGAAATGACCAGGAGGAAAGTAGGATTTAGACACACTGACAAATTTCCTTATATTATGCAGTCAAAATGCAGTCAAAGCTTTGGTTCATGCAGAAAATTATTTAAAATACTTTATAAAATTACCTTCAGGCTAGGCATATAAGGTGTGTATGAAACAAACGAATTGCATGCTCAGACTTCGGTCCCACCCCCAAGATATCTCATTATGTATATGCAAATAAATATTCCCAAATCCAAAAATATCAAGAATCTGAAACACTTCTGGTCCCCAGCACTTCGGATAAGAGATACTCAACCTGTATATGCTAAGTTTTAATTCAGGTTAAATTATGAATATTTGAGGCAACCTACAGAACTTACCACAAATCCAACTTAACAAATAAAATGTTTAAACAACCATAAAAAAATACTTCTAAGTATGCTAGCCCAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3007:HG3_PB_pbsv_6285:HG2_PB_pbsv_6473:HG3_Ill_Spiral_7120:HG2_PB_HySA_12069:HG2_Ill_Spiral_472:HG3_Ill_MetaSV_4359:HG4_PB_SVrefine2Falcon1Dovetail_3947:HG3_PB_SVrefine2Falcon1Dovetail_4040:HG3_Ill_SVrefine2DISCOVARDovetail_4921:HG2_PB_SVrefine2Falcon2Bionano_3241:HG2_10X_SVrefine210Xhap12_4671:HG2_PB_SVrefine2Falcon1plusDovetail_9983;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4671:HG2_PB_SVrefine2Falcon2Bionano_3241:HG3_Ill_SVrefine2DISCOVARDovetail_4921;NumExactMatchSVs=3;ClusterMaxShiftDist=0.043082;ClusterMaxSizeDiff=0.0379851;ClusterMaxEditDist=0.169106;PBcalls=8;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=598;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:1260459-1251037;PctSeqSimilarity=0.9921;PctSizeSimilarity=1;PctRecOverlap=0.7295;SizeDiff=0;StartDistance=-162;EndDistance=-162;GTMatch=0;TruScore=90;MatchId=4570.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:64:0|1:39:0:0:40:./.:0:0:0:0:0/1:21:15:0/1:6:44:.:.:.
chr6	1356085	HG2_PB_PB10Xdip_26056	G	GGAGGGGAGGGGAAGGGAGAGGAGGGGAGGGGAAGGGAGGGGAGAGGAGGGAAGGGAAAGGAAGGGAAGGCAAGGGAGGGGGAGGGAACGGGAGGGGAGGGGAGGAGAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3010:HG2_PB_SVrefine2Falcon1plusDovetail_9987:HG4_PB_SVrefine2PBcRDovetail_3226:HG2_PB_HySA_12077:HG3_PB_HySA_10043:HG4_Ill_MetaSV_4359:HG4_Ill_GATKHCSBGrefine_4566:HG2_PB_PB10Xdip_26057:HG2_PB_PB10Xdip_26056:HG2_Ill_breakscan11_3651:HG4_PB_pbsv_6486:HG2_PB_pbsv_6477:HG4_PB_SVrefine2Falcon1Dovetail_3952:HG3_PB_SVrefine2Falcon1Dovetail_4045:HG3_PB_SVrefine2Falcon1Dovetail_4044:HG2_PB_SVrefine2PBcRplusDovetail_9305:HG2_PB_SVrefine2PB10Xhap12_4743:HG2_PB_SVrefine2Falcon2Bionano_3244:HG2_PB_SVrefine2Falcon1plusDovetail_9986;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_breakscan11_3651:HG2_PB_PB10Xdip_26056:HG2_PB_PB10Xdip_26057;NumExactMatchSVs=3;ClusterMaxShiftDist=0.281588;ClusterMaxSizeDiff=0.281588;ClusterMaxEditDist=0.327138;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=137;DistBack=-19;DistForward=19;DistMin=-19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:1356086-1356086;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9928;PctRecOverlap=0.9856;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=4571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:50:1/1:4:23:3:17:./.:0:0:0:0:./.:0:5:./.:.:.:.:.:.
chr6	1674199	HG3_PB_pbsv_6297	T	TGTTGATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTATTTTTTTTTTTAGTAGGAGCGGCGGTTTCCACCGTGTTAGCCAGGATGGTCGTCGATCTCCTGACCTCGTGATCCGCCCGTCTTCGGCCTCCCAAAGTAGCCTGTAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9993:HG2_PB_pbsv_6484:HG3_PB_pbsv_6297:HG3_PB_SVrefine2Falcon1Dovetail_4051;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_6297;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0651466;ClusterMaxSizeDiff=0.0456026;ClusterMaxEditDist=0.191083;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=156;DistBack=21245;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:1674200-1674200;PctSeqSimilarity=0.9439;PctSizeSimilarity=0.9679;PctRecOverlap=0.9427;SizeDiff=5;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=95;MatchId=4573.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:30:./.:27:9:6:17:./.:0:0:0:0:0/0:34:0:./.:.:.:.:.:.
chr6	2000204	HG2_Ill_MetaSV_4198	T	TTATATATATATTTTATATATATATATTATATATATATTTTATATATATATTATATATATATAATATATATATATTATATATATATATTATATATATATTATATATATATTATATATATATAATATATATATATTA	20	PASS	ClusterIDs=HG4_PB_pbsv_6499:HG4_PB_SVrefine2PBcRDovetail_3235:HG4_PB_assemblyticsfalcon_21902:HG4_PB_SVrefine2Falcon1Dovetail_3962:HG2_PB_pbsv_6493:HG4_Ill_scalpel_6280:HG2_Ill_scalpel_6401:HG2_Ill_MetaSV_4198;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_MetaSV_4198:HG2_Ill_scalpel_6401:HG4_Ill_scalpel_6280;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0581818;ClusterMaxSizeDiff=0.0218182;ClusterMaxEditDist=0.247273;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=135;DistBack=2;DistForward=23;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=139;REFWIDENED=6:2000129-2000267;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4574.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:1|0:2:24:27:2:./.:0:0:0:0:0/1:4:13:./.:.:.:.:.:.
chr6	2376480	HG2_Ill_SVrefine2DISCOVARplusDovetail_10882	T	TAAACATATAACTAACACACCACACAACACACACAAGCCTAATGCACCAGATAAGCATACATTTATGCACACACACACCCAATACATACACTACAGCCAAACCCAACACACCACACACACATACACATATGCACACATGTACACATACCCAACACACACAGCCAACACACATAGACACCACACACCACACACACTCAACCCCCTCACAAACTCCCAACATATACCCAACACACACATCACACATGTACACATATGCACACACCCCAAACACATTGACACCACACACCACACACACTCAACCTCTCCCCACACAGACTCCTAACATATACCCAACACACACACCACACAAACACAATGCACCACACAAACATACACATAAGCACACACACCCAACACATACACCACACCCAAACCCAACATGCCTTACATACACACAGATATGCACACATGTTAACACACCCAATGCACATACACACCACGTATATATTTTACACACCACACACACTCAACATACCATACACACAAACCCCCAACATATACCCAACACACACCACACAATACACACAAACCCAACACACACATATGCACACAACACACACGCACACAACACACACATACACACATGCATACACACATGCAATACACATACACACCACACACACGCTCCACACGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3963:HG2_PB_pbsv_6494:HG4_PB_pbsv_6500:HG3_PB_pbsv_6308:HG2_Ill_MetaSV_4199:HG4_Ill_MetaSV_4365:HG3_PB_SVrefine2PBcRDovetail_3019:HG3_Ill_SVrefine2DISCOVARDovetail_4930:HG3_Ill_MetaSV_4365:HG3_Ill_GATKHCSBGrefine_4437:HG2_PB_SVrefine2Falcon1plusDovetail_9999:HG2_Ill_manta_1856:HG2_Ill_SVrefine2DISCOVARplusDovetail_10882:HG2_PB_SVrefine2PBcRplusDovetail_9314:HG2_PB_SVrefine2PB10Xhap12_4754:HG4_PB_SVrefine2PBcRDovetail_3236:HG2_PB_SVrefine2Falcon2Bionano_3252:HG2_Ill_GATKHCSBGrefine_4522:HG4_Ill_SVrefine2DISCOVARDovetail_4822:HG2_PB_PB10Xdip_25151:HG2_PB_PB10Xdip_25150:HG2_Ill_breakscan11_3652:HG3_PB_assemblyticsfalcon_22364:HG3_PB_SVrefine2Falcon1Dovetail_4058:HG4_PB_assemblyticsfalcon_21904;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10882:HG2_Ill_manta_1856:HG2_PB_SVrefine2Falcon1plusDovetail_9999:HG3_Ill_GATKHCSBGrefine_4437:HG3_Ill_MetaSV_4365:HG3_Ill_SVrefine2DISCOVARDovetail_4930:HG3_PB_SVrefine2PBcRDovetail_3019;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0707071;ClusterMaxSizeDiff=0.0692641;ClusterMaxEditDist=0.140625;PBcalls=15;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=672;DistBack=15;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=6:2376481-2376484;PctSeqSimilarity=0.9993;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4575.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:75:1/1:1:34:0:21:./.:0:0:0:0:1/1:0:29:1/1:2:167:.:1705:.
chr6	2384507	HG2_10X_SVrefine210Xhap12_4684	C	CCCACATCAACGCTTGCAGTGCTGTTGTGGTCATTCACGAACATCTGCAGAGCAGCAGATAATTTGAGTCGCTTGATGTGCATGATCCCAGCTGAGGCTGAACAAGACATCATTGCTCTGCCTTCTTGTTTCAGCTCTCATACCATACATAAGTGTCTTTTTTGCAGTCTGTTTAACTATGGTTTTTGCATTTTTGTGCTTTTTGTTGGTGATTTCACTGCTTAAAATGGCTCCCCAGCAGTGCTGAAGTGACTATTGTTCCTAAATGCAAGAAGCTATGATGTGTCTTACAGAGAAAATATGTGTTTTAGATAAGCATTGTGCAGGCATGAGTTATAGCTATTGGCTGTGAGTCCAATGTTAGTGAATCAACAATATATATTAAATAAGGTGACTTTAAACAGAGACACTGTTCATACAGGGTTTTATGTTGATCAGTTGATGAACATGTTGTGGCCAGAGGCTCGCAGGAACCTAGCCCTGTATTTCCCTTAGGGGCAATGGTTCAGTATTCACTAATTCAGTGCACCTTGGATAACAAGACTCATCTGCTCACATATAAATACATTGCATTGCATCTAACTAGCACTAAGGAAATGCTGGTATGTTGTGATCATGGAACTGTGTGTGTATATCAGACAAGTTAGGCTACGAAGGGTCCTGTCCCCTATTCACTTGGTCCATTGTGGACAGGACCCATTTCTATTACTTAGATTGTACCACTGTCCATGATGTTCTCCAAGTCTTCTTTCTTTTTTTTTTTTTTGAGACGGAATCTTGCTCTATTGCTCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTTCGCCTCCCAGGTTGCAACCTTTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAATAGCTGGGACTACAGGCACATGCCACCATGACCAGCTAATTTTTGTATTTTTAGTAGAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10000:HG2_PB_pbsv_6495:HG4_PB_pbsv_6501:HG4_PB_assemblyticsfalcon_21905:HG3_PB_assemblyticsfalcon_22365:HG4_PB_HySA_9699:HG4_PB_SVrefine2Falcon1Dovetail_3964:HG3_Ill_SVrefine2DISCOVARDovetail_4931:HG3_Ill_MetaSV_4366:HG3_Ill_GATKHCSBGrefine_4438:HG2_PB_SVrefine2Falcon2Bionano_3253:HG4_Ill_SVrefine2DISCOVARDovetail_4823:HG4_Ill_MetaSV_4366:HG4_Ill_GATKHCSBGrefine_4576:HG2_Ill_MetaSV_4200:HG2_10X_SVrefine210Xhap12_4684:HG3_PB_SVrefine2Falcon1Dovetail_4059:HG2_PB_SVrefine2PB10Xhap12_4755:HG2_Ill_breakscan11_3653:HG2_PB_PB10Xdip_25152;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4684:HG2_Ill_MetaSV_4200:HG4_Ill_GATKHCSBGrefine_4576:HG4_Ill_MetaSV_4366:HG4_Ill_SVrefine2DISCOVARDovetail_4823;NumExactMatchSVs=5;ClusterMaxShiftDist=0.114589;ClusterMaxSizeDiff=0.113528;ClusterMaxEditDist=0.199469;PBcalls=11;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=956;DistBack=-3;DistForward=3061;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=6:2384508-2384510;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:24:./.:30:6:7:13:./.:0:0:0:0:0/1:32:9:0/1:47:92:.:1705:.
chr6	2505118	HG3_PB_HySA_10057	T	TCCTCATCTCCTCCTCACCCTCCTCACCCCTCCTCATCTCCTCCTCACCCCTCCATATCTCCTCCTCACCCCTCATCTCTTCCTCACCCCTCCTCACCCCTCCTCACCCCTCCTCATCCCTCTTCATCTCCTCCTCGCCCCTCCTCACCCCTCCTCACCCCTCTTATCTCCTCCTCACCCCTCCTCACCTTTCCTCATCTCCTCCTCACCCTTTCTCATCTCATCTCCTCCTCACACCCCTCATCTCTTCCTCACCCCTCATCCTCCTCCTCACCCTCCTCATCTCTTCCTTACCCCTCCTCATCTCCTTCTCACTCCTCGTCATCTCCTCCACACCCCTCCTCATCTCTTCCTCATCCTTCCTCATCACCTCCTCACACCCTCCTCACCCCCTCATCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4756:HG2_PB_HySA_12098:HG2_PB_SVrefine2Falcon1plusDovetail_10001:HG2_PB_SVrefine2Falcon2Bionano_3254:HG4_PB_HySA_9700:HG3_PB_HySA_10057:HG2_PB_PB10Xdip_25153:HG2_PB_PB10Xdip_25154:HG2_PB_SVrefine2PBcRplusDovetail_9315:HG2_PB_SVrefine2PB10Xhap12_4757:HG3_PB_SVrefine2Falcon1Dovetail_4060:HG4_PB_SVrefine2Falcon1Dovetail_3965:HG3_PB_SVrefine2PBcRDovetail_3020:HG4_PB_SVrefine2PBcRDovetail_3237;NumClusterSVs=14;ExactMatchIDs=HG3_PB_HySA_10057;NumExactMatchSVs=1;ClusterMaxShiftDist=0.235943;ClusterMaxSizeDiff=0.235943;ClusterMaxEditDist=0.297268;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=399;DistBack=81;DistForward=48;DistMin=48;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=564;REFWIDENED=6:2504857-2505420;PctSeqSimilarity=0.9496;PctSizeSimilarity=0.9236;PctRecOverlap=0.9215;SizeDiff=-33;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=93;MatchId=4577.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:3:18:2:25:./.:0:0:0:0:./.:0:0:./.:5:74:.:.:.
chr6	2853708	HG2_PB_SVrefine2Falcon2Bionano_3258	T	TCCCCTCCCCTCTCCCTGTCCCTCTCCTGAAGTCCCCTCCCCTGACCCTCACCTGGGACCCCCCTCCCCTTTCCCTGACCCTCTCCTGGGAC	10	PASS	ClusterIDs=HG3_PB_HySA_10066:HG2_PB_pbsv_6500:HG3_PB_pbsv_6315:HG3_PB_SVrefine2PBcRDovetail_3022:HG2_PB_SVrefine2Falcon2Bionano_3258;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3258:HG3_PB_SVrefine2PBcRDovetail_3022;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0434783;ClusterMaxEditDist=0.173913;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=91;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=410;REFWIDENED=6:2853540-2853949;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4578.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:33:./.:7:17:14:10:./.:0:0:0:0:./.:4:1:./.:.:.:.:.:.
chr6	2920156	HG2_PB_SVrefine2Falcon1plusDovetail_10006	T	TAAAATGTACATTGGTAGAAGGCTCGAAGGCGCCGCGGGCTGGGGTCGGTGGCTTAGGGAGCCCGTCCGGCCATGGTGGCCGCGGGTGGTGGTTGGCGCGGCTGCGCTGCGGCCCGGGGCAGTGCGGAGCCGGGACAGTCGCGGCGCTGACGCCCGCGGGCCCCAGCTGCAGATATGAAGCGGAGCCGCTGCCGCGACCGACCGCAGCCGCCGCCGCCGACCGCCGGGAGGATGGAGTTCAGCGGGCAGCGGAGCTGTCTCAGTCTTTGCCGCCGCGCCGGCGAGCGCCGCCCGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGCGGGGCCCGAGGGCAAGGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGTCAGCCCCCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGAGGGAGGTAGGGGGGTCAGCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGTCGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGAGGGAGGTGGGGGGGTCGGCCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCTCCGGAGGGAGGTGGGGGGGGTCAGCCCCCCCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGCCCCCCTGCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCCGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3655:HG3_PB_pbsv_6317:HG2_PB_PB10Xdip_25273:HG2_PB_pbsv_6502:HG4_PB_pbsv_6509:HG3_PB_assemblyticsfalcon_22377:HG4_PB_HySA_9711:HG3_PB_SVrefine2PBcRDovetail_3024:HG2_PB_SVrefine2Falcon1plusDovetail_10006:HG2_PB_SVrefine2PB10Xhap12_4763:HG2_PB_HySA_12108;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10006;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0621413;ClusterMaxSizeDiff=0.0621413;ClusterMaxEditDist=0.224203;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=2522;DistBack=12207;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:2920157-2920171;PctSeqSimilarity=0.9913;PctSizeSimilarity=0.9848;PctRecOverlap=0.9852;SizeDiff=-39;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4579.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:52:./.:8:19:24:18:./.:0:0:0:0:0/1:29:13:0/1:90:201:.:2567:.
chr6	2940839	HG4_Ill_GATKHCSBGrefine_4581	A	AAGTGGGTGAGACGACGAGCCCATTAGGAGGAACGGAACACTCACTGCGAAAGTTGCAATTTCATTTCTAT	20	PASS	ClusterIDs=HG2_PB_HySA_12109:HG4_PB_HySA_9712:HG3_PB_HySA_10069:HG4_Ill_svaba_8473:HG4_Ill_Krunchall_9621:HG4_Ill_GATKHC_10940:HG4_Ill_GATKHCSBGrefine_4582:HG4_Ill_250bpfermikitraw_9189:HG3_Ill_svaba_8454:HG2_Ill_svaba_8369:HG4_PB_pbsv_6510:HG4_PB_assemblyticsfalcon_21915:HG3_PB_assemblyticsfalcon_22378:HG3_PB_pbsv_6318:HG4_Ill_Krunchall_9620:HG4_Ill_GATKHC_10939:HG4_Ill_GATKHCSBGrefine_4581:HG4_Ill_250bpfermikitraw_9188:HG3_Ill_GATKHC_10855:HG3_Ill_GATKHCSBGrefine_4442:HG3_Ill_250bpfermikitraw_8801:HG2_Ill_GATKHC_10859:HG2_Ill_GATKHCSBGrefine_4526:HG2_Ill_250bpfermikitraw_9121;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9121:HG2_Ill_GATKHCSBGrefine_4526:HG2_Ill_GATKHC_10859:HG3_Ill_250bpfermikitraw_8801:HG3_Ill_GATKHCSBGrefine_4442:HG3_Ill_GATKHC_10855:HG4_Ill_250bpfermikitraw_9188:HG4_Ill_GATKHCSBGrefine_4581:HG4_Ill_GATKHC_10939:HG4_Ill_Krunchall_9620;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0827586;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.273973;PBcalls=7;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=13;DistForward=92;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=119;REFWIDENED=6:2940813-2940931;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4580.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:27:1|0:4:22:26:2:./.:0:0:0:0:0/1:22:16:./.:.:.:.:.:.
chr6	2972608	HG4_PB_assemblyticsfalcon_21916	A	AAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGCCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACTCAAAC	10	PASS	ClusterIDs=HG2_PB_pbsv_6504:HG3_PB_HySA_10070:HG3_PB_assemblyticsfalcon_22379:HG4_PB_assemblyticsfalcon_21916:HG3_PB_pbsv_6319:HG2_PB_SVrefine2Falcon1plusDovetail_10007:HG4_PB_SVrefine2Falcon1Dovetail_3969;NumClusterSVs=7;ExactMatchIDs=HG4_PB_assemblyticsfalcon_21916;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0654206;ClusterMaxSizeDiff=0.0623053;ClusterMaxEditDist=0.149163;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=310;DistBack=29337;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:2972609-2972609;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9936;PctRecOverlap=0.9521;SizeDiff=-2;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=98;MatchId=4581.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:45:24:0|1:42:1:2:20:./.:0:0:0:0:0/0:24:0:0/1:5:21:.:.:.
chr6	3222190	HG2_PB_SVrefine2PB10Xhap12_4768	A	ACACCACCACTACCACCATCACCACATCACCACCACCATCACCATCACCACCACTACCACCACCACCACCACTACCACCATCGCCACCACCACCATCACCACCACCACCACCACCACCACACTACCACCACCACCATCACCATCATCATCACCACCACCACGACCACAACACTACCACATCACCACCACCATCACCACCACCACCATCACCACCACTACCACCACATCACCACCACCATCACCACTACCACCACATCACCACCACCACCACCATCACCACTACCACCACCACCACCACACTACACATCACCACCACCACCACCATTACCACCACCACCACCACCACTATCACCATCATCACCATCACCACCATCACCACCACCACTACCACTACCACCAACACAATCACCACCACGATCACCATCATCACCACCACCACCACCACACCACTACCACCATCATAATTACCACCACCATCACCACCACCACCACCACTATCACCATCATCACCACCACCACCACCACCACTAGCACAACCACAACACTACCACATCACCACCACCACTACCACTACTACCATCACCATCACCACCACCATCACCACCACCACCACAATACTACCACATCACCACCACCACCATCATCATCACCACCACTACCACCACCACTACCACCACCACCACCATCACTACTACCATCACCACCACCACCACCATCACCACCACCACGACCACCACAACACTACCACATCACCACCACCACCATCACCACTCCACCACCACTACCACCACCACCACCACCACCATCACCACCACCACGACCACCACAACACTACCACATCACCACCACCACCATCATCATCACCACCACTACCACCACCACTACCATCACTACTACCATCACCACCACCACCACCATCACCACCACCACGACCACCACAACACTACCACATCACCACCACCATCACCACCACCACCATCACCACCACTACCACCACAATCACCACTACCACCATCACCACCACTACTACCATCACCACCACCACCACCATCACCACTACCACCACCACCACCACCACATACCACATCACCACCACCACCATCATCATCACCACCACTACCACCACCACTACCACCACCACCATCACTACTACCATCACCACCACCACCACCACCACCACGACCACCACAACACTACCACATCACCACCACCACCATCACCACTGCCACCACCACTACCACCACCACCACTACCACCATCGCCACCATCACCACCACATCACCACCACCACCACCACTACTACCACCACCACCACCATCACCACTACTACCATCACCACTACTACCACCACCACCACCACACCACCATCACCACCACCACCACCACCACCATCACCACCACTACTACCACCACCATCACCACCACCACTACCACTACCACCATCACAATCACCACCACCATCACCACCACCACTACCACCACCATCACCACCACCACTACCACTACCACCATCACAATCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACTACCACACCACCATCACAATCACCACCACCATCACCACCACCACCACCACCACCATCACCACCAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4767:HG2_PB_pbsv_6508:HG2_PB_SVrefine2Falcon1plusDovetail_10011:HG4_PB_SVrefine2PBcRDovetail_3242:HG2_PB_SVrefine2PB10Xhap12_4768:HG2_PB_SVrefine2Falcon2Bionano_3262;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4768;NumExactMatchSVs=1;ClusterMaxShiftDist=0.185185;ClusterMaxSizeDiff=0.185185;ClusterMaxEditDist=0.322222;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1630;DistBack=39936;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=370;REFWIDENED=6:3222191-3222560;PctSeqSimilarity=0.9525;PctSizeSimilarity=0.9552;PctRecOverlap=0.7738;SizeDiff=73;StartDistance=-332;EndDistance=-332;GTMatch=1;TruScore=89;MatchId=4582.0.3	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:1/1:3:20:1:15:./.:0:0:0:0:./.:1:6:1/1:4:380:.:1784:.
chr6	3356283	HG2_PB_SVrefine2PB10Xhap12_4770	G	GGGGAGGGGGAGGAGGCGGGGGGCGCGGGAGGGGGAGGAGGCGGGGGGGGCGGGAGGGGGAGGAGGCGGGGGGGCGGCAGGGGGAGGAGGCGGGGGGGCGGCAGGGGGGAGGCGGGGGGGCGGGAGGGGAGGAGGCGGGGAGGCGGGAGGGGGAGGAGGCGTGGGGGCGGGAGGGGGAGGAGGCGGGGAGGCGGGAGGGGGAGGAGGCGGGGGGGCGGGAGGGGGAGGAGGCGGGGGGCGGGAGGGGGGAGGCGGGGGGGCGGGAGGGGGCGGGAGGGGGAGGAGGCGGGGGGCGGGGGGGCGGGAGGGGAAGGAGGCGGGGGGGCGGGGGGGGCGGGGGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10012:HG2_PB_PB10Xdip_25304:HG2_PB_PB10Xdip_25305:HG2_PB_HySA_12114:HG4_PB_pbsv_6519:HG2_PB_pbsv_6510:HG3_PB_SVrefine2PBcRDovetail_3026:HG2_PB_SVrefine2Falcon2Bionano_3263:HG2_PB_SVrefine2PB10Xhap12_4770:HG4_PB_SVrefine2PBcRDovetail_3243;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4770;NumExactMatchSVs=1;ClusterMaxShiftDist=0.121662;ClusterMaxSizeDiff=0.11276;ClusterMaxEditDist=0.196862;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=341;DistBack=-53;DistForward=-1;DistMin=-53;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=74;REFWIDENED=6:3356284-3356357;PctSeqSimilarity=0.987;PctSizeSimilarity=0.9913;PctRecOverlap=0.8754;SizeDiff=-3;StartDistance=-41;EndDistance=-41;GTMatch=0;TruScore=95;MatchId=4583.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:./.:0:0:0:0:./.:0:0:0:0:./.:0:0:0/1:2:7:.:.:.
chr6	3402651	HG3_Ill_250bpfermikitraw_8808	G	GACCCCAATCACCCACACTACCCAGAGCGCACTAGGCTCCAGCTGACACCACAATCACCCACACTACCCAGAGTGCACTAGGCCCCAGCCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25306:HG3_PB_pbsv_6329:HG4_PB_SVrefine2Falcon1Dovetail_3974:HG4_PB_pbsv_6520:HG4_Ill_manta_1626:HG2_PB_pbsv_6511:HG4_Ill_GATKHC_10946:HG4_Ill_GATKHCSBGrefine_4585:HG4_Ill_250bpfermikitraw_9193:HG4_Ill_150bpfermikitraw_8774:HG3_PB_SVrefine2PBcRDovetail_3027:HG3_Ill_SVrefine2DISCOVARDovetail_4936:HG3_Ill_GATKHC_10864:HG3_Ill_GATKHCSBGrefine_4444:HG3_Ill_250bpfermikitraw_8808:HG3_Ill_150bpfermikitraw_8604:HG2_PB_SVrefine2Falcon2Bionano_3264:HG2_PB_SVrefine2Falcon1plusDovetail_10013:HG2_Ill_GATKHC_10866:HG2_Ill_GATKHCSBGrefine_4528:HG2_Ill_250bpfermikitraw_9126:HG2_10X_SVrefine210Xhap12_4695:HG4_PB_assemblyticsfalcon_21924:HG3_PB_assemblyticsfalcon_22387:HG2_PB_SVrefine2PB10Xhap12_4771:HG4_PB_HySA_9723:HG3_PB_HySA_10079:HG2_PB_HySA_12115:HG2_PB_PB10Xdip_25307;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4695:HG2_Ill_250bpfermikitraw_9126:HG2_Ill_GATKHCSBGrefine_4528:HG2_Ill_GATKHC_10866:HG2_PB_SVrefine2Falcon1plusDovetail_10013:HG2_PB_SVrefine2Falcon2Bionano_3264:HG3_Ill_150bpfermikitraw_8604:HG3_Ill_250bpfermikitraw_8808:HG3_Ill_GATKHCSBGrefine_4444:HG3_Ill_GATKHC_10864:HG3_Ill_SVrefine2DISCOVARDovetail_4936:HG3_PB_SVrefine2PBcRDovetail_3027:HG4_Ill_150bpfermikitraw_8774:HG4_Ill_250bpfermikitraw_9193:HG4_Ill_GATKHCSBGrefine_4585:HG4_Ill_GATKHC_10946:HG4_Ill_manta_1626:HG4_PB_SVrefine2Falcon1Dovetail_3974;NumExactMatchSVs=18;ClusterMaxShiftDist=0.108696;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.255319;PBcalls=15;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=90;DistBack=2532;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=214;REFWIDENED=6:3402652-3402865;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4584.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:30:0|1:15:3:2:25:./.:0:0:0:0:0/1:21:8:./.:.:.:.:.:.
chr6	3777007	HG4_Ill_SVrefine2DISCOVARDovetail_4834	A	ATGTGTGTGTGTGTGTGTATGTATGTGTGTGTTGTCTGTGTGTTGTGTGTGTGTTGAATATGTTGGGTGTATTGTTGTATGTGTCTTGTATATGTCATGTGTGTTGTGTGTGTGTTGTGTGTTACTGGGTATGGTGTGTGTTTGTTGGGTGTATTGTGGGTATTGTGTGTGTTGGGAATGTATGTGTTAATGTGTGTGCTGTGTATATGTGCTGTGTTTGTTGAGTGTATTGTGTCTTGCGTATATTGGGAAATGTGTGTTGTGTGTGTATTGGGGTGTGTATGTTGCAGGTGTGTGTTGGGTGTATTGTGTGTGTTGGGTATGTGTGTGTTTTGTGTGTGATGTCCTGTTGGTGTGTGGTGTGTGTGTATTGGGGTGTGCATGTTGAGGTGTGAGGTATGTGTGTGGGTGGTGCATTTGTTGTGTATTGGATGTATGTTGCGTATGTGTTGTGTGTATATGTGTTGGGTATGTGTGTGGTGTGTGTGTTGGGTGTGCATTGTGTGTGTTGGGTATGTGTGTTGGGTGTGTGTTAGGTGTGCGTTGTGAATGTGTGTTGGGTGTGTGTTGGGTATGTATTGTGTAATGTGTGTATTGGCTGTGTTGTGTGATGTGTGTTGAGTGTGTGTTGGATGTGTGTGTTGTGTGTATTGGCTATGTTGTTTGTTGCGTATGTGTATTGGGTATGTGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10016:HG4_PB_pbsv_6525:HG4_PB_HySA_9731:HG2_PB_pbsv_6515:HG4_Ill_GATKHCSBGrefine_4588:HG3_PB_pbsv_6334:HG3_Ill_MetaSV_4370:HG3_Ill_GATKHCSBGrefine_4448:HG2_Ill_GATKHCSBGrefine_4531:HG2_Ill_MetaSV_4203:HG4_Ill_MetaSV_4367:HG2_PB_PB10Xdip_25600:HG2_PB_PB10Xdip_25599:HG4_PB_SVrefine2Falcon1Dovetail_3977:HG4_PB_SVrefine2PBcRDovetail_3247:HG4_Ill_SVrefine2DISCOVARDovetail_4834:HG3_PB_SVrefine2PBcRDovetail_3030:HG3_Ill_SVrefine2DISCOVARDovetail_4939:HG2_PB_SVrefine2Falcon2Bionano_3267:HG2_PB_SVrefine2PB10Xhap12_4774:HG2_Ill_SVrefine2DISCOVARplusDovetail_10890;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3267:HG3_Ill_SVrefine2DISCOVARDovetail_4939:HG3_PB_SVrefine2PBcRDovetail_3030:HG4_Ill_SVrefine2DISCOVARDovetail_4834:HG4_PB_SVrefine2PBcRDovetail_3247;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0874393;ClusterMaxSizeDiff=0.0874393;ClusterMaxEditDist=0.279422;PBcalls=12;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=690;DistBack=-170;DistForward=-1;DistMin=-170;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:3777039-3777039;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.9971;PctRecOverlap=0.9668;SizeDiff=-2;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=98;MatchId=4585.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:25:1:22:./.:0:0:0:0:1/1:0:12:1/1:2:123:.:.:.
chr6	5097476	HG2_Ill_SVrefine2DISCOVARplusDovetail_10897	A	AAGCCAACAGTCTAATATATCTATATGTTTGAGACAGGGTCTTGTTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCATGGCTCATGGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3251:HG2_PB_HySA_12140:HG4_PB_pbsv_6531:HG4_PB_HySA_9744:HG2_PB_PB10Xdip_25723:HG3_PB_HySA_10098:HG3_PB_assemblyticsfalcon_22405:HG3_PB_SVrefine2PBcRDovetail_3034:HG2_PB_pbsv_6521:HG3_Ill_SVrefine2DISCOVARDovetail_4948:HG2_PB_SVrefine2PB10Xhap12_4779:HG2_Ill_SVrefine2DISCOVARplusDovetail_10897;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10897:HG2_PB_SVrefine2PB10Xhap12_4779:HG3_Ill_SVrefine2DISCOVARDovetail_4948:HG3_PB_SVrefine2PBcRDovetail_3034;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0860215;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.335079;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=90;DistBack=58289;DistForward=30;DistMin=30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=183;REFWIDENED=6:5097477-5097659;PctSeqSimilarity=0.9909;PctSizeSimilarity=1;PctRecOverlap=0.7912;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=92;MatchId=4587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:46:0|1:22:0:1:44:./.:0:0:0:0:0/1:34:10:./.:.:.:.:.:.
chr6	5537699	HG2_PB_PB10Xdip_25726	C	CTGGAGATGTCCCGGGCCTCTCTCGAGTTGGAGATGTCCCGGGCCTCCTCTCGAGT	10	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_21945:HG4_PB_HySA_9748:HG2_PB_PB10Xdip_25727:HG2_PB_PB10Xdip_25726;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_25726:HG2_PB_PB10Xdip_25727;NumExactMatchSVs=2;ClusterMaxShiftDist=0.107143;ClusterMaxSizeDiff=0.107143;ClusterMaxEditDist=0.160714;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=55;DistBack=0;DistForward=15;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=232;REFWIDENED=6:5537644-5537875;PctSeqSimilarity=0.9849;PctSizeSimilarity=0.9821;PctRecOverlap=0.2281;SizeDiff=-1;StartDistance=43;EndDistance=43;GTMatch=0;TruScore=73;MatchId=4588.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:62:1/1:2:24:0:26:./.:0:0:0:0:0/0:28:0:./.:.:.:.:.:.
chr6	6821989	HG4_Ill_SVrefine2DISCOVARDovetail_4853	A	AGATGGAGATGATGGTGATAATGATAGTGGTGATGATGATGATGATGGTGTGGTGTTGATATTTGTGGTGATGATGGTGATGATGATGGTGGTGATGATGGTGGTGATGATGATGGTGGTGATGGTGGTGGTGATGATGACGATAGTTGTGGTGGTGGTGATGGTGATGATGGTGTGGTGATGATGATGATGATGATGATGGTGATGATGATGGTGTGGTGATGATGGTGGTGATGATGATGTGGTGGTGATGATGGTGTGGTGGTGATGATGGTTTTGATGGTATGGTGGTGATGATGATGATGATGGTGTGGTGATGATGGTGGTGATGGTGGTGGTGGTGATGATGGTGATGGTGGTGATGATGGTGGTGATGGTGATGGTAGTGATGATGGTGGTGGTGATGGTGATGATGGTGGTGATGATGGTAGT	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3043:HG3_PB_pbsv_6354:HG4_PB_pbsv_6546:HG2_PB_PB10Xdip_25832:HG2_Ill_breakscan11_3656:HG3_PB_HySA_10130:HG3_Ill_manta_1541:HG3_Ill_MetaSV_4378:HG3_Ill_GATKHCSBGrefine_4462:HG2_Ill_MetaSV_4208:HG2_Ill_GATKHCSBGrefine_4549:HG2_PB_pbsv_6536:HG4_PB_SVrefine2PBcRDovetail_3264:HG4_Ill_SVrefine2DISCOVARDovetail_4853:HG2_PB_SVrefine2PB10Xhap12_4789:HG2_PB_SVrefine2Falcon2Bionano_3278:HG2_PB_SVrefine2Falcon1plusDovetail_10031:HG2_Ill_SVrefine2DISCOVARplusDovetail_10911:HG4_PB_SVrefine2Falcon1Dovetail_3990:HG3_Ill_SVrefine2DISCOVARDovetail_4958;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10911:HG2_PB_SVrefine2Falcon1plusDovetail_10031:HG2_PB_SVrefine2Falcon2Bionano_3278:HG2_PB_SVrefine2PB10Xhap12_4789:HG4_Ill_SVrefine2DISCOVARDovetail_4853:HG4_PB_SVrefine2PBcRDovetail_3264;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0566893;ClusterMaxSizeDiff=0.0498866;ClusterMaxEditDist=0.20598;PBcalls=11;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=431;DistBack=3906;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=342;REFWIDENED=6:6821990-6822331;PctSeqSimilarity=0.9691;PctSizeSimilarity=0.9977;PctRecOverlap=0.6143;SizeDiff=-1;StartDistance=-166;EndDistance=-166;GTMatch=0;TruScore=86;MatchId=4589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:0:36:2:16:./.:0:0:0:0:1/1:0:11:1/1:1:63:.:.:.
chr6	7442112	HG3_Ill_manta_1543	C	CTCAGGGATTGTAAACGCACCAATCAGCACCCTGTTAAAACGGACCAATCAGCTCTCTGTAAAACAGACCAATCAGCTCTCTG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8598:HG2_PB_HySA_12184:HG2_PB_pbsv_6541:HG4_PB_assemblyticsfalcon_21973:HG3_PB_assemblyticsfalcon_22440:HG3_PB_pbsv_6358:HG4_PB_pbsv_6551:HG2_PB_PB10Xdip_25972:HG4_PB_HySA_9777:HG4_Ill_Krunchall_9680:HG4_Ill_150bpfermikitraw_8821:HG3_Ill_manta_1543:HG3_Ill_Spiral_7188:HG2_Ill_Krunchall_9355;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8598:HG4_Ill_Krunchall_9680:HG4_Ill_150bpfermikitraw_8821:HG3_Ill_manta_1543:HG3_Ill_Spiral_7188:HG2_Ill_Krunchall_9355;NumExactMatchSVs=6;ClusterMaxShiftDist=0.147727;ClusterMaxSizeDiff=0.114943;ClusterMaxEditDist=0.295455;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=82;DistBack=-300;DistForward=32;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=6:7442111-7442114;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4590.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:1/1:2:19:0:17:./.:0:0:0:0:1/1:0:14:./.:.:.:.:.:.
chr6	8597456	HG2_Ill_250bpfermikitraw_9187	A	ATGTGTATATATACACATATGTATATGTATATATGTGTGTATATATACACATATGTATATGTATATATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3285:HG2_PB_HySA_12193:HG4_PB_pbsv_6558:HG4_Ill_250bpfermikitraw_9246:HG2_PB_pbsv_6547:HG2_Ill_Krunchall_9365:HG2_Ill_250bpfermikitraw_9187;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9187:HG2_Ill_Krunchall_9365:HG4_Ill_250bpfermikitraw_9246;NumExactMatchSVs=3;ClusterMaxShiftDist=0.100719;ClusterMaxSizeDiff=0.0857143;ClusterMaxEditDist=0.206897;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=1131;DistForward=75;DistMin=75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=98;REFWIDENED=6:8597445-8597542;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:28:0|1:49:3:1:25:./.:0:0:0:0:0/1:20:24:./.:.:.:.:.:.
chr6	8761442	HG3_Ill_150bpfermikitraw_8660	C	CTCCCCCTCCCCCTCCCCCTGCATTGTCTTCGTCTTCCCTCCCCACATCCCTCTCCCCTCCTCCTCCCCCAATCCCTCTCCCCTCTCCTCCCCTTCCCCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4721:HG4_PB_assemblyticsfalcon_21987:HG2_Ill_breakscan11_3658:HG4_PB_SVrefine2Falcon1Dovetail_3997:HG4_Ill_manta_1634:HG4_Ill_GATKHC_11016:HG4_Ill_GATKHCSBGrefine_4611:HG3_Ill_Spiral_7199:HG3_Ill_Krunchall_9135:HG3_Ill_GATKHC_10936:HG3_Ill_GATKHCSBGrefine_4469:HG3_Ill_250bpfermikitraw_8866:HG3_Ill_150bpfermikitraw_8660:HG2_Ill_manta_1872:HG2_Ill_SpiralSDKrefine_14359:HG2_Ill_GATKHC_10943:HG2_Ill_GATKHCSBGrefine_4555:HG2_Ill_250bpfermikitraw_9190:HG2_Ill_150bpfermikitraw_8607:HG4_Ill_MetaSV_4378:HG2_PB_PB10Xdip_26096:HG2_PB_PB10Xdip_26095:HG2_PB_pbsv_6548:HG3_PB_HySA_10148:HG2_PB_HySA_12194:HG3_PB_pbsv_6364:HG4_PB_SVrefine2PBcRDovetail_3271:HG4_Ill_SVrefine2DISCOVARDovetail_4863:HG3_PB_SVrefine2PBcRDovetail_3050:HG3_Ill_SVrefine2DISCOVARDovetail_4966:HG2_PB_SVrefine2PB10Xhap12_4796:HG2_PB_SVrefine2Falcon2Bionano_3286:HG2_Ill_SVrefine2DISCOVARplusDovetail_10918:HG4_PB_HySA_9783;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8607:HG2_Ill_250bpfermikitraw_9190:HG2_Ill_GATKHCSBGrefine_4555:HG2_Ill_GATKHC_10943:HG2_Ill_SpiralSDKrefine_14359:HG2_Ill_manta_1872:HG3_Ill_150bpfermikitraw_8660:HG3_Ill_250bpfermikitraw_8866:HG3_Ill_GATKHCSBGrefine_4469:HG3_Ill_GATKHC_10936:HG3_Ill_Krunchall_9135:HG3_Ill_Spiral_7199:HG4_Ill_GATKHCSBGrefine_4611:HG4_Ill_GATKHC_11016:HG4_Ill_manta_1634;NumExactMatchSVs=15;ClusterMaxShiftDist=0.189474;ClusterMaxSizeDiff=0.189474;ClusterMaxEditDist=0.284153;PBcalls=13;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=99;DistBack=-1;DistForward=43;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=6:8761427-8761451;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:1:22:2:16:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr6	8902167	HG4_Ill_GATKHC_11020	T	TTTGTTCCATTTTCTACACTCATTGTAGCATGCTATAATCACTATTTTGTAGTTGGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4798:HG4_PB_SVrefine2PBcRDovetail_3272:HG2_PB_pbsv_6551:HG3_PB_pbsv_6368:HG4_PB_HySA_9786:HG2_PB_HySA_12197:HG4_PB_SVrefine2Falcon1Dovetail_3999:HG4_Ill_svaba_8535:HG4_Ill_manta_1635:HG4_Ill_Krunchall_9699:HG4_Ill_GATKHC_11020:HG4_Ill_GATKHCSBGrefine_4614:HG4_Ill_250bpfermikitraw_9251:HG3_PB_SVrefine2PBcRDovetail_3053:HG3_PB_HySA_10156:HG3_Ill_svaba_8516:HG3_Ill_scalpel_6544:HG3_Ill_SVrefine2DISCOVARDovetail_4968:HG3_Ill_Krunchall_9137:HG3_Ill_GATKHC_10937:HG3_Ill_GATKHCSBGrefine_4470:HG3_Ill_250bpfermikitraw_8869:HG3_Ill_150bpfermikitraw_8661:HG2_PB_SVrefine2Falcon1plusDovetail_10041:HG2_Ill_svaba_8435:HG2_Ill_Krunchall_9369:HG2_Ill_GATKHC_10945:HG2_Ill_GATKHCSBGrefine_4556:HG2_Ill_250bpfermikitraw_9192:HG2_Ill_150bpfermikitraw_8609:HG2_10X_SVrefine210Xhap12_4723;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4723:HG2_Ill_150bpfermikitraw_8609:HG2_Ill_250bpfermikitraw_9192:HG2_Ill_GATKHCSBGrefine_4556:HG2_Ill_GATKHC_10945:HG2_Ill_Krunchall_9369:HG2_Ill_svaba_8435:HG2_PB_SVrefine2Falcon1plusDovetail_10041:HG3_Ill_150bpfermikitraw_8661:HG3_Ill_250bpfermikitraw_8869:HG3_Ill_GATKHCSBGrefine_4470:HG3_Ill_GATKHC_10937:HG3_Ill_Krunchall_9137:HG3_Ill_SVrefine2DISCOVARDovetail_4968:HG3_Ill_scalpel_6544:HG3_Ill_svaba_8516:HG3_PB_HySA_10156:HG3_PB_SVrefine2PBcRDovetail_3053:HG4_Ill_250bpfermikitraw_9251:HG4_Ill_GATKHCSBGrefine_4614:HG4_Ill_GATKHC_11020:HG4_Ill_Krunchall_9699:HG4_Ill_manta_1635:HG4_Ill_svaba_8535:HG4_PB_SVrefine2Falcon1Dovetail_3999:HG4_PB_SVrefine2PBcRDovetail_3272;NumExactMatchSVs=26;ClusterMaxShiftDist=0.259259;ClusterMaxSizeDiff=0.259259;ClusterMaxEditDist=0.296296;PBcalls=10;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=56;DistBack=-56;DistForward=58;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=6:8902168-8902225;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4593.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:39:0|1:31:0:3:37:./.:0:0:0:0:0/1:30:26:./.:.:.:.:.:.
chr6	9344449	HG2_Ill_GATKHCSBGrefine_4562	A	ACCATATGTGTATATGTATGTATATGTATATGTATGTATATGTATATGTATGTATATGTATATGTATATGTATATGTATATGTATATGTATGTATATGTATATGTATGTATATGTATATGTATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGTATGTATGTATGTGTATATACATACAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10923:HG4_PB_HySA_9797:HG4_PB_pbsv_6569:HG2_PB_pbsv_6557:HG4_Ill_MetaSV_4383:HG4_Ill_svaba_8542:HG4_Ill_GATKHCSBGrefine_4621:HG2_Ill_svaba_8441:HG2_Ill_GATKHCSBGrefine_4562:HG4_PB_HySA_9796:HG4_Ill_SVrefine2DISCOVARDovetail_4868;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4562:HG2_Ill_svaba_8441:HG4_Ill_GATKHCSBGrefine_4621:HG4_Ill_svaba_8542;NumExactMatchSVs=4;ClusterMaxShiftDist=0.127877;ClusterMaxSizeDiff=0.127877;ClusterMaxEditDist=0.243523;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=198;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:9344450-9344449;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4594.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:35:./.:31:15:15:11:./.:0:0:0:0:0/1:29:15:./.:.:.:.:.:.
chr6	9988912	HG4_Ill_MetaSV_4384	G	GTCAGGAGATGGAGACCATCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACATCCATCTCAAAAAAAAAAAATCCTTCCGAATTACAGGAAGAACATAAAAGTTGCTAACATTGCAAGTTGATGGTAAACATGTTTCATATATGAACATAGTTAAGTATTAATAATAAATATGACTGTTATTAAAGTTCTATGGGTAATGCTTTATCTCAATTGGTCT	20	PASS	ClusterIDs=HG4_PB_pbsv_6571:HG4_PB_HySA_9802:HG3_PB_pbsv_6379:HG2_PB_pbsv_6559:HG4_Ill_manta_1640:HG4_Ill_MetaSV_4384:HG4_Ill_GATKHCSBGrefine_4623:HG3_PB_SVrefine2Falcon1Dovetail_4079:HG3_Ill_manta_1550:HG3_Ill_SVrefine2DISCOVARDovetail_4976:HG3_Ill_MetaSV_4388:HG3_Ill_GATKHCSBGrefine_4480:HG2_PB_SVrefine2Falcon2Bionano_3291:HG2_PB_SVrefine2Falcon1plusDovetail_10045:HG2_Ill_MetaSV_4216:HG2_Ill_GATKHCSBGrefine_4564:HG2_10X_SVrefine210Xhap12_4731:HG3_PB_assemblyticsfalcon_22467:HG2_PB_HySA_12213:HG2_Ill_breakscan11_3659;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4731:HG2_Ill_GATKHCSBGrefine_4564:HG2_Ill_MetaSV_4216:HG2_PB_SVrefine2Falcon1plusDovetail_10045:HG2_PB_SVrefine2Falcon2Bionano_3291:HG3_Ill_GATKHCSBGrefine_4480:HG3_Ill_MetaSV_4388:HG3_Ill_SVrefine2DISCOVARDovetail_4976:HG3_Ill_manta_1550:HG3_PB_SVrefine2Falcon1Dovetail_4079:HG4_Ill_GATKHCSBGrefine_4623:HG4_Ill_MetaSV_4384:HG4_Ill_manta_1640;NumExactMatchSVs=13;ClusterMaxShiftDist=0.142529;ClusterMaxSizeDiff=0.142529;ClusterMaxEditDist=0.254717;PBcalls=9;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=225;DistBack=193325;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:9988913-9988913;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:0|1:33:5:1:26:./.:0:0:0:0:0/1:29:20:./.:.:.:.:.:.
chr6	10606836	HG3_Ill_Krunchall_9161	C	CTTCCATTAAAGAAATTTAATGGAAATTTCCATTAAAGAAATTTAATGGAAAT	20	PASS	ClusterIDs=HG2_Ill_GATKHC_10965:HG2_PB_HySA_12225:HG3_PB_pbsv_6386:HG3_PB_HySA_10180:HG2_PB_PB10Xdip_26213:HG3_PB_assemblyticsfalcon_22474:HG2_PB_pbsv_6564:HG3_PB_SVrefine2PBcRDovetail_3062:HG3_Ill_Krunchall_9161:HG2_PB_SVrefine2PBcRplusDovetail_9329:HG2_PB_SVrefine2PB10Xhap12_4810:HG2_Ill_Krunchall_9387;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHC_10965:HG3_PB_SVrefine2PBcRDovetail_3062:HG3_Ill_Krunchall_9161:HG2_PB_SVrefine2PBcRplusDovetail_9329:HG2_PB_SVrefine2PB10Xhap12_4810:HG2_Ill_Krunchall_9387;NumExactMatchSVs=6;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.254545;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=5772;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=72;REFWIDENED=6:10606837-10606908;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4596.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:39:1|0:0:37:29:2:./.:0:0:0:0:0/1:24:25:./.:.:.:.:.:.
chr6	11491768	HG4_Ill_SVrefine2DISCOVARDovetail_4881	A	ATGATGTGTGTGGTGTGTATGTGGTTGTGTGTGGTGTATATGTGGTGTGTATATGTGTGTGTGTGTGATGTGTATGGAGTTGTGTGTGTGGGTAATGTGTGTGGTATGTATGTGTGAGTGTGGTGTGTATGTGGTGTGTGTGTGGGTGATGTGTGGTGTGTGTGGGTATGTGATGTGTATTCAGAGTGTAGGTGATGTGTGTAGGGTTGTGTGTGCAGGGGTGAAGTGTGGTGTGTGTGGTATGTATATGTGAGTGTGGTGTGTATGTGGTGTGTGTATGTGAATGTGATGTGTGTAGGGTTGTGTGTGTGTGGTGTGTGTGGTATGTACATGTGGGTGTGGTGCATATATGGTGTGTGTGTGATATGTGTCGGGTTTTGTGTGTGATGTGTGTGGTGTGTGGTATGTGTGAGTGTGGTGTGTATGTGGTGTGTGTGTATGTGATGTGTGTAGGGTTGTAGGGGGTGATGTGTGGTATGTATGTGTGAGTGTGGTGCATATATGGTGTGTGTGATGTGTGTAGGGTTGTGTGCGGGGGTGTGATGTGTGTGGTGTAGGGTATGTGTGAGTGTGGTGTGTATGTGGTGTGTGTGTATGTGATGTGTGTAGGATTGTGTGTGGAGACTGATGTGTGTGTGGTGTGTGTGGTATGTATGTGTGAGTATGGTGTGTATGTGATGTGTATGTGTGTGAGATGTGCGTAGGGTTTGTGGAGGG	20	PASS	ClusterIDs=HG3_PB_pbsv_6388:HG2_PB_PB10Xdip_24536:HG3_PB_assemblyticsfalcon_22480:HG4_PB_SVrefine2Falcon1Dovetail_4008:HG4_PB_pbsv_6577:HG2_PB_PB10Xdip_24535:HG2_PB_pbsv_6565:HG4_PB_HySA_9814:HG4_Ill_GATKHCSBGrefine_4629:HG3_Ill_GATKHCSBGrefine_4488:HG2_Ill_GATKHCSBGrefine_4568:HG2_PB_HySA_12231:HG2_Ill_MetaSV_4219:HG3_Ill_MetaSV_4393:HG3_PB_SVrefine2PBcRDovetail_3064:HG3_Ill_SVrefine2DISCOVARDovetail_4990:HG2_PB_SVrefine2Falcon1plusDovetail_10048:HG4_PB_SVrefine2PBcRDovetail_3281:HG4_Ill_SVrefine2DISCOVARDovetail_4881:HG2_PB_SVrefine2PBcRplusDovetail_9330:HG2_PB_SVrefine2PB10Xhap12_4811:HG2_PB_SVrefine2Falcon2Bionano_3294:HG2_Ill_SVrefine2DISCOVARplusDovetail_10931;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10931:HG2_PB_SVrefine2Falcon2Bionano_3294:HG2_PB_SVrefine2PB10Xhap12_4811:HG2_PB_SVrefine2PBcRplusDovetail_9330:HG4_Ill_SVrefine2DISCOVARDovetail_4881:HG4_PB_SVrefine2PBcRDovetail_3281;NumExactMatchSVs=6;ClusterMaxShiftDist=0.148459;ClusterMaxSizeDiff=0.148459;ClusterMaxEditDist=0.312169;PBcalls=15;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=716;DistBack=192;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=153;REFWIDENED=6:11491769-11491921;PctSeqSimilarity=0.9903;PctSizeSimilarity=0.9958;PctRecOverlap=0.9207;SizeDiff=-3;StartDistance=-56;EndDistance=-56;GTMatch=0;TruScore=96;MatchId=4597.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:89:1/1:2:35:1:29:./.:0:0:0:0:1/1:0:15:1/1:1:186:.:885:.
chr6	12102167	HG2_10X_SVrefine210Xhap12_4740	T	TAAGAAAGCTGGAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3661:HG2_PB_pbsv_6571:HG3_PB_pbsv_6393:HG2_PB_SVrefine2PB10Xhap12_4815:HG2_PB_PB10Xdip_24582:HG3_Ill_MetaSV_4397:HG2_10X_SVrefine210Xhap12_4740:HG2_PB_SVrefine2Falcon2Bionano_3298:HG2_Ill_manta_1883:HG2_Ill_GATKHCSBGrefine_4573:HG2_PB_HySA_12244:HG2_PB_PB10Xdip_24583;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4740:HG3_Ill_MetaSV_4397;NumExactMatchSVs=2;ClusterMaxShiftDist=0.146819;ClusterMaxSizeDiff=0.143322;ClusterMaxEditDist=0.182648;PBcalls=7;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=313;DistBack=11198;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:12102168-12102183;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4598.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:60:0|1:31:4:1:36:./.:0:0:0:0:0/1:31:16:0/1:9:35:.:.:.
chr6	13191041	HG4_PB_pbsv_6586	A	ACCAAGGATCTTCGCCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACCGCAGAAGACGGTGATTTCTGCATTTCCATCTGACGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGGCGCAGGGCCAGTGTGTGGTTGCGCACCGCTGCGCGAGCCGAAAAGCAGGGGCGAGGCATTTGCCTCACCTGCGGAAGCGGGTGCAAGGGTCAGGGAGTTCCCTTTTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTTGGAAAATCGGTCACTCCCCACCCGATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCAACCACGAGACTATATCCCACCCTGGCTCTGGGAGGGTCCTACGCCCACGAATTCTCGCTGATTGCTTAGCACAGCCAAGTCTTGAGATCAAACTTGCAAGGCGGGCAACGAGGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTTAGGTAAACAAAGCAAGCCGGGAAGCTCGAACTGTGGAGCCCACCACAGCATCAAGGAGGCCTGCCTTACCCTCTGTAGGCTCACCCTCTGGGGCAGGGCACAGACAAACAAAAAAGACAGCAGTAACCTCTGCAGACTTTAAGTGTCCCTGTCTGACAGCTTGCAAGAGAGCAGTGGTTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGCAGACTGGCCTCCTCAAGTGCGGTCCCTTGACTCTCTGACCCCCGGCAGCAGCCTAAACTGGGAGGCACCCCCCAGCAGGCGGCCACACTGGACCACCTCACAACGGCAGGGTATTCCAACAGAACCTGCAGCTGAGGGTCCTGTCTGTTTAGAAGGAAAAACTAAAACAACCAGAATGACATCTACACCGAAAACCATCTGTAATTCAACCATTCATCAAAGACCAAAAAAGTAGATAAAAACCACAAAGGAGGGGAAAAAACAGGAACAGAAAAACTGAAAACTCTAAAACGAGAGCGCTCTCCTCCTCAAAAGGACGCAGTTCCTCACCAGCAACAGCAACAAAGCTGGATGGAGAATGATTGATGAAGCTGAGCAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGGACATCAAACAAGGCAAAGAAGTTGAAACTTTTGAAAAAAATTTAGAAAATGTATAACTAAGAATAACCAATACAGAGAAGTTGCTTAAAGGAGCTGATGGAGCTGAAAACAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCCGATCAAACTGGAAGAAAGGGTATTCAGCATATGAAGATGAAATGAATGAAATGAGCGAGAAGCGGGAAGTTTAGAGAAAAAAGAATAAACAAGAAATGAGCAAAGCCTAAACCAAGAAATAATGGGACCTTATGTGAAAAGACCAAATCTACGGTCTGATTGGTGTACCTGAAAGTGATTGTGGAGCAATGGAACCAAGTTGGAAGAAAACTCTGCAGGGATATTATCCAGGAGAACTATCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGGAACGCCACAAAGAACTCCCGAGAAGAGAAAACTCCAAGACACATAATTGTCATGATTCACCAAAAGTTGAATGAAGGAAAAAATGTTAAGGGCAAGCCAGAGAAAAGGTCGGAGTAACCTCAAAGGAAAGCCCATCAGGACTAACAGCGGAATCTCTCGGCAGAAACCCTTACAAGCCCATAAGAGAGCTGGGCGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTTCAACCAGAATTTCATATCCAGGCACAAAACTAAGCATTCATTAAGTGAAGGAGAAATAAATACTTTATAGAACAAGCAAATGTTTAGAATTTTGTCACCACCAGGCCTTGCCCTAAAAGAGCTCCTGCAAGGAAGCGCTAAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAACCATGCCAAAATGTTTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGTCTAACATCATAATGACAGGATCAAATTTCACACATAAACAATATATAACTTTAAAATATAAATGGAAAACTAAATTCTGCAATTAAAAGACCACAGACTGCAAGTTGGATAAAAGAGTCAAGGACCCATCAGTTGTCTGTATTCAGGGAAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAGATCTACAAGCCAATGGAAAACAAAAAAAAAAGGCAGGGGTTGCAATCCTAGTCATCTATTAAAAACAGACTTTAAACCAACAAGCATCAAAAAGAGACAAAAAGAAGGCCATTACATAATGCGTAAGGGATCAATTCAACAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCCAGATTCATAAAGCAAGTCCTCAGTGGACCCTACAAAGGAGACTTAGGACTCCCAACACATTAATACATGGAGCACTTTTAACCACCCCACTGTTCAACATTAAGACAGATCAACGGACAGAAAGTCAAACAAGGGTATACCCAGGAATTGAACTCAGCTCTGCACCAAAGCAAGACCTAATAAGACATCTACAGAACTCTCCACCCCAAATCAACAAGAATATACATTTTATTCAGCACCACACCAACACCTATTCCAAAATTAACCACATAGTTGAAGTAAAGCTCTTCCTCAGCAAATGGGTAAAAGAACAGAAAATTATAACAAACTATCTCTCAGACCCACAGTGCAATCAAACTAGGAACTCAGGATTAAGAATCTCACTCAAGCCGCTCAACTACATGGAAACTGAACAAACCTGCCTCCTGAATGGACTACTGGGTACATAACGGAAATGAAGGCGAAATTAAAGATGTTTCTTTGCAAACCAACGAGAACAAAGACACCACATTACCAGAAATCTCTGGACGCATTCAAAGCAGTGTGTAGAGGAAATTTATAGCACTAAATTGCCTACAAGAGAAAGCAGGAAAGATCCCAAATTTGACAAACCCTAACATCACAATTAAATAGAACTAGAAAAAGCAAAGAGCATAAAACACATTCAAAAGCTAGGCAGAAGGCAAGAAAATACTAAAATCAGAGCAGAAACTGAAGGAAATGAGACACAAAAACCCTTCAAAAAAATCAATGAATCCAGGAGCTTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGTACTAATTAAAGAAAAAAAGAGATAAGAATCAAATAGACACAATAAAAAAATGATAAAGGGGATATCACCACCGATCCCCACAGAAATACAAACTACCATCGAAAGGAATACTACAAACACCTCTACGGCAAAATAAACTAGAAAATCTAGAAGAAATGGCATACATTCCTCGACACATTACACTCTGCCCAAGACTAAACAGAAAGGAAGTTTGAATCTCTGAATCGAACCAATAACAGGCTCTGAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAAGAGTCCAGGACAGAATGGATTCACAGCCGCAATATCTTACCAGAGGTTACAAGGAGGAATTGGTACCATTCCTTCTGAAACTATTCCCAATCAATAGAAAAAGAGGGAATTCCTCCCTAACTCATTTATGAGGCCAGCAATTATTCTGATACCCCAAGCCGGGCAAGCAGAGCCAACAACCAAACAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAAATCCTCAATTAAAAATACTGGCAAACCGAATCCCAGCAGCACATCAAAAAGCTTATCCACCATGGGATAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTACAATATACGCAAATTCAATAAATGTAATCAGCATATAAACAGAGCCAAAGACAAAAACCCACATGATCCATCTCAATAGATGCCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTTCATGCTTAAAAACTCTCAATAAATTAGGTATTGGATGCGGACGTATTTCAAAATAATAAGAGCTAATCTATGACAAACCCACAGCCCAATATCATTACTTGAATTGGCAAAAAACTGGTAGCATCCCTTTCGAAAAACCGCAACAAGGGACAGCGGATTGCCCTCTCTCCACCGCTCCTTATTCAACAATATGTGTTGGAAAAGTGTGCTGGCCAGGGCCAATCCAGGCAGCGAGAAGGAAATAAAGGGTATTTCAAATACAAAGAGGAAGTCAAACTTGTCCCTGTTTTGCAGACGACAGATTGTTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAAATCTCCTTAAGCTGATAAGCAACCTTCAGCAAAGATCTCAGGATACAAAAATCAATGCTACAAAAAATCACAAGCATTCTTATTACACCAAACAACAGACACAACAGAGAGCCAAATCATTGGGTGAACTCCCAATTCACAATTCTTCAAAGCAGAATAAAATACTAGGAATCCAACTTACAAGGATGTGAAGGACCTCTTCAAGGAAACTAACAAACCACTGCTCAAGGAAATAAAAAGAGGAGGACAACAAATGAAGAACATTTCCATTGCTCATGGGTAGGGAAAGAATCAATATCGTGAAAAATGGCCATACTGCCAAGGTATTTAACAGATTACAATTGCCATCCCCATCAAGCTACCAATGACTTTCTTTCACAGCAATTTGGAAAAAACTAACTTTTTAAAGTCATTATGGAACCAAAAAAAGAGCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAGCTGGAGGCATTCACACTACCTGACTCTTCAAACATATACTACAAGGGCCTACAGTAACCAAAAACAGGCATGGTACTGGCTACCAAAACAGAGATATAAGATTCAAAATGCGAAACATAACAGAGCCCTTCAGAAATAATGCCGGCATATCTACAAACTATCTGATCTTTGACAAACCTGCAGAAAAACAAGCAATGGGCGAAAGGATTCCCTATTTAATAAATTGCGTGCTGGGAAAATCTAGGCTTAGCCATATGTTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGATTAAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTTAGAAGAAAACCTAGCATTACCATTCAGGACATAGGCTGTGGGCAAGGACTTCATGTCCAAAACAACCAAAAGCAAATGGCAACAAAAGACAAAATTGACAAATGGGATCTTATTAAACTAAAAGAGCTCTTGCACAGCAAAAGAAACTACCATCAGAGTTTGAAACAGGACAACCTACAACAGGAAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATTGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGCGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATTGCAGCCAAAAAACACATGAAGAAATGCTTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATTGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTTCAGGAAACAAACAGGTGCTGCGAGAGGATGCGGAGAAATAGGAAACACTTACACTGTTGGTGGGACTGTAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGACACTAGAAATACCATTTGAGCCAAGCGCGATTCCCAGAATGTAGCTGGGTAGTTATACCAAAATGATGCGCGCGAGAGATAATAAAAAATTCATGCGTGTATAAGCACACATATAGACACAACGTATGTTTGAATAATTGCTTAGCGGCACATAGTTCACCAATTCAGCTCTGTATAGAGCATGCTGGAACTCCAAACCCAAAACTAAGGTGTAACAACAACTAAATGGATTAGCACATAACCGAATTAAGACAATAATGTAAGAGGCAGGACTAGTACCTTACACCAATGAAACTATCGACAAGCCATAAAAAATATGATCTCAGTGAGTCGCTCATATGTCAGGAACATGAGAGAAAAATGAGGAATTGGATATAGACTTACCATCAATTACAGTGCAATGGCTAAATAGGCGGTCTTGCGAAGAACAATAAACCAACAACACCGCTACATTGACCAACCAATTGCTAAAATTGCTCACCCATAGCTATGTAGCTTAGCCGTAGTTAGAGCTTGTGGGGATAATTGAACAAATTTATATGGAGTGACACATGGATCGCCAAGCAGAAGATAGCAGACGAAGTAATCTGAATGCAAACATCATCTGAGTGTGACAATATGTGTGTTCGGGGTCGGGTGTATGGGTTATGGAATTCCTTTTTTTGTTTATGTTCATGTGTGAGTATATATCTATATGTCTTTATATTGTATCATCATTAGTATTGGGTGTGCAGTGCACCAGCAATGGCACATGTTATTAACATATGCTCACTAATATACTACTGCAGCCAATGTGCACTATGTACTCTCTAGAAACTTATGAGGTTTTATAATAAAAAAAAAAAAAAAAAAAAAGGAATAAACAAATGAGAATGAGCACAATCTAGACCCCAGAAGGTTAAAAGTGTAAGCAATACAATGAAT	20	PASS	ClusterIDs=HG2_PB_HySA_12256:HG4_PB_pbsv_6586:HG2_PB_PB10Xdip_24609:HG2_Ill_breakscan11_3662:HG2_PB_SVrefine2PBcRplusDovetail_9336:HG2_PB_SVrefine2Falcon1plusDovetail_10053;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_6586;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0940547;ClusterMaxSizeDiff=0.0940547;ClusterMaxEditDist=0.132107;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=6656;DistBack=7;DistForward=2547;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:13191042-13191041;PctSeqSimilarity=0.9358;PctSizeSimilarity=0.9123;PctRecOverlap=0.9123;SizeDiff=584;StartDistance=26;EndDistance=26;GTMatch=0;TruScore=92;MatchId=4600.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:49:43:0|1:40:0:5:33:./.:0:0:0:0:0/0:42:1:./.:224:23:.:6105:.
chr6	13200600	HG2_Ill_250bpfermikitraw_9237	G	GCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTCAAAGTGCTGGGATTACAGGCACGTGCCACCACA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4745:HG2_PB_PB10Xdip_24610:HG3_PB_HySA_10219:HG2_PB_pbsv_6577:HG3_Ill_Krunchall_9194:HG2_PB_HySA_12259:HG3_Ill_GATKHC_10999:HG3_Ill_GATKHCSBGrefine_4496:HG3_Ill_250bpfermikitraw_8924:HG2_Ill_manta_1885:HG2_Ill_Krunchall_9422:HG2_Ill_GATKHC_11001:HG2_Ill_GATKHCSBGrefine_4575:HG2_Ill_250bpfermikitraw_9237:HG3_Ill_SVrefine2DISCOVARDovetail_5000:HG2_PB_SVrefine2PB10Xhap12_4817:HG2_PB_SVrefine2Falcon1plusDovetail_10054:HG2_PB_SVrefine2PBcRplusDovetail_9338;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9237:HG2_Ill_GATKHCSBGrefine_4575:HG2_Ill_GATKHC_11001:HG2_Ill_Krunchall_9422:HG2_Ill_manta_1885:HG3_Ill_250bpfermikitraw_8924:HG3_Ill_GATKHCSBGrefine_4496:HG3_Ill_GATKHC_10999:HG3_Ill_Krunchall_9194;NumExactMatchSVs=9;ClusterMaxShiftDist=0.272727;ClusterMaxSizeDiff=0.242424;ClusterMaxEditDist=0.318182;PBcalls=7;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=70;DistBack=4589;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=101;REFWIDENED=6:13200573-13200673;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:35:1|0:8:28:25:0:./.:0:0:0:0:0/1:27:23:./.:.:.:.:.:.
chr6	13503050	HG3_PB_pbsv_6401	C	CGAGTTCGAGGAGGAGGAGCAAAGTATGGCCGAATAGGAACAGCCTCCGGTTCTACAGCTCCCCAGCGTGAGCGACGCAGAAGACGGGTAGGTGATTTCTGCCATTTCCAATCTGACGGTACCGGGTTCATCTCACGTAGGGAGTGCCCAGACAGTGGGCGAGGCCAGTGTGGTGTGCGCACCCGTGCGCGTGCCGACAGCAGGGCGAGGCATTGGCCTCACTGCTTGGGAAGTACGCAAAGGGTCAGGGAGTTCCCTTTCCGAGGTCAATAGGGAAAGGGGGTGGACCACGCACCTGGAAAATCGGAGTCACTGCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAATAAACAACCCGGGCGCGACCACGAGACTATATCCCACACCCTGGCTTCAGAGGTTCCTACGCCCACGGTAATCTCGCTGATCTGGCTAGCACAGGCAGTCTGAGATCCAAAACTGCAAGGCGGGGCCAACGATGGCTGGGGCGAGGGGCGTGCCCGCGCCATTGCCCAGGCTTGCGTTAGGTAAACAAAACAGAATTATTTATGAGCGGCCGGAAGCTCGAAAACCTGGGTGGAGCCCACCACAGCTCAAGGCAGGTTCCGCCTTGCCTCATGTATTAGGCTCCACCTCTGGCGGGCAGGGCACAGACAAACAAAAAAACAGCACGTACCTCTGCAGACTCTAAAAAGTGATCCCTGTCTGACAGCTTTTGAAGAGAGCAGTGGTTCCCCAGGCACGCAGCTGGAGATTCTGAGAACTAGGCAGCTGCCTCCTCAGTGGGTCCCCTGGACCCTGACTCCCCGAGCCAGGCTAACTGGGAAGCACCCCCAAGCAGGGCACACTTGACACCTCACACGGCAGGGGTATCCAAACAGTACTGCCAGCTGAGTACCTGTCTGTTAGAAGGGAAAACTAACAACCAGAAAGGACATTACACCGAAACAAACCCATCTTGTACATTCACCATCATCAAAAGACCAAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAAACAGAAAAAACTGGAAAACTCTAAAACGACAGAGCGCTCTCTCCTCCTCCAAAGGAACGCGAGCGTTCCTCACCAGCAACCAGAACAAGCTGGATGGAGAATGATTTTGATCGAGCTGAGAGAATAAGGCTTCAGCTCACGATTCAAACTTACTCTCTGAGGCTACCGGAGGACATTCAAAACAAAGTGCAAAAAGAGTTGAAAACTTTTGAAAAAAAAATGGTTAGAAAAGAATGTTAATTAGTATAACTAGAATAACCCAATACAGAGATAAGGCTTTAAAGGAAGCTGACGGAGCTGAAAACCAAGGCTCTCTGAGAACTACAGTGAAGCAATGCATAAGCCTTCAGAGCCGGAGGGAATCAACTGGTAAAGAAAGGGGTATCAGCACATGGAAGATGAAATGAATGAAATGAGTGAGAAGGGAGTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAAAATATGGGGACTATGTTGAAAGAACCACAATCTACGTCATTGATTTGGTGTACCTGAAGTTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGTGATATTATCCAGGAGAACTTCCCCAATCTACGGCAAGGCCAGGCCAACGTTCAGATTCAGGAAAATACAGGAGAACGCCACAAAGATACTTCCTCGAGAAGAGCAAACTCCAAGACCACATAATTGTCAGATTCACCCAAAGTTGAAATGAAGGAAAATATGTTAAGGGCAGCCAGAGAAGAAGCGTCGGACGTTTACCGCTCAAAGGAAAGCCCATCAGGCTTACAGCGAACGACGGATTCTCTCGGCCAGAAACCCTAAACAAGCCAGAGAGAGTGGGGCCAATATTCAACATTCTTAAAGAAAAAGAATTTTCAAACCAGAATTGTCATATCCAGCGCCAAAGTAAGTTCGATAAGTGAAGGAGAAATAAAAGATACTTTATAGACAAGCGAAATGCTGTAGAGATTTTGTCACCACCAGGCCTGGCCCCTAAGAAGAGCTCCTGAAGAAGCGCTAAACATGAAAGGGAACAAACCGGTACAGCCGCCTGCAAAAATCATGCCAAAATGCTCAACAAGACCCATTGAGACTTAGGAAGAACTGCATCAAACACTTAGATGAGCAAAATCACCAGCTTAACATCATAATGACAGGATCAAAATTCCACACATAACAATTATTAACTTAAATATTTAAATGGACTAAATTCTTGCAATTAAAAGGACACAGACTTGCAAGTTGGATTAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCCGATTCCACGTGCAGAGACACACCATAGGCTCAAAATTAAAATAAGGATGGAGGACCAAGCAATGGAAAAAAACCATCAAAAAAAGGCAGGGTGTTTGCATATCCTAGGTCTCTTGATAAAACAGACTTTAAACCAACAAAGATCAAAGGAGAGCCAAAGATAGTGCCCATTACATATGGTAAAGGGATCAATTCAACAGAAGGATGCTACAACTATCTAAATATTTATGCACCCAAATACGAGAAGCACCCAGAATTCATAAAGCAAGTCCTCAGTGATCCCTACAAAGAGACCTTAGACTCCCAACATTACATAATGGGAGACTTTAACACCCCACTGTTCAACATTAGACAGAGATCAACGTCAGACAGAAGTCAACAAGGATACCCCAGGAATTGAACCTAGCTCTGCCACCAAGCCCAGAACCTAATAGACATCTCTACAGAAACGCCTCTCACCCCAAAATTCAACAGCAATATACATTTTTTCAGCACCACACCACCACCTATTTGCCAAAATATTTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAACAGAACAGAAACTTATAACAAAACTATCTCTTCAGAACCACAGTGCAATCAAAAACTAGGAAGCCTCAGCATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACACACCTGCTTCGCGAATGACTACGGGTACATAACGAAGATGAAGCAGAAAATAAAAGATGTTCTTTGAAACCAAGAGTAACAAAGAACACCACATACCGAATCTCTGGGACGCATTCAAGCCAGTGTGTAGAGGCGAATTTATTAGCACTAAATGCCTTACAAGAGAAAGCCAGTGGAATGATCCAAATTGACCACCCCTAACATCACCAATTTAAAAGAACTAGAAATAGCAAGAGCAAAACACATTCAAAAGCCTATCAGAAGGCAAGATAAGTAACTAAAATCAGAGCAAAACTGAAGAAATAGAGACACAAAAAACCCTTATCAAAAAATCAATTTGAATCCAGGAAGCTGGGGTTTTTTGAAAGGATCAACAAAATGTGACTTAGACCGCTAGCAGACTATAAAGAAAAAAAGATGTGGAGAATGAGAAAGAATTCAAAATAGACGCAATAAAAAATATTAAGGGGGATATCACACCGACTCCCACAGAAATACAACTACCTATCAGAGTTAATACTACCAAACACCCGCTACGGCCAATGAAAACTTAAAAAATCTAGAAAGAAATGGATAACATTCTCTGACACATACACTCTCCAAGACTAAAACCAGCGAGAGTTGAATCTCTGAATAGACCAATACAGGCTCTGAAATTGTGGCAAATAATCAATAGGGTTACAACCAAAAAGAGTCGATGACCAGATGGATTCACAGCTCCGAATTTCTACCAGAGGTACAAGGAGAACTGTTACCCATCTCCTTCTGAACTATTCCCAATCAATAGAAAAAAGAGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGGACCACAACGCAAAAAAGAGAATTTTAGACCAATATCCTTTGATGAACATTGATGCAAAAAATTCCTCAATAGATTAATGGCAAACCGAATCCAGCAGCACATCAAAAGCTTATCCACTCATGATCAAGTGCGGCTTGTCATCCCTGGGATGCGAAGGCTGCGTTCAACATTATACGCAAATCGAATAAATGTAAAATCCAGAGCATATATAAAACAGAGGCCAAAAAGACAAAACCAACATGATTATTCTCAATAGGATGCAGGAAAAAAGCCTTTGACAAAATTTCAACAACCGCTTCATGCTAAAAAACTCTCACTTAGGTATTGATGGACGTAATTCAAAATAATAATGACGCTATCTATGACACAACCACAGCCAATATCATACTGATATGTGCTCAAAAACGGAAGCATTCCCTTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCCTCACCACTCCTATTCAACATAGTGTTGGAAAGTTCTGGCCAGGGCTATCAGGCAGGAGAAGGAAATAAAGGGTATTTCAATTAGGAAAAGATAGGAAGTCCAAATGTCCCTGTTTGCAGACGACATGATTGCTCTCAACCCCATCGTGCTCAGCCCAAAAATCTCCTAAAGCTTGATAAAGCAACTTCAAGCAAGTCTCAGGATACAACCAATCAATTGTACAAAAATCCACATAGCATTCTGTTATACACCAACAACATGACCAAACAGAGTGCCAAATCCATGGGGTGATACTCCCCCATTTCACAATTTGCTTCAAGAAATAAAAATACCTAGGAATCAACTTACAAGGGATGTGAAGGAACCTCATCAAGGGAGAACTCAAAACCACTGTCCTCAAGGAAATAAAAAGAGGGACACAAAACAAATGGAAGACATTCCATCTGAGCTCTGGTAGGAAGAATCCAATATCATGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCGCATCAAGCTACCAATCGACTTTCTTTCACAGAATCTGGAAAAACTACTTTAAGTTCATATGGAACAAAAAAGAGGGCCCGCATCGCCAAGTCAATCCTATAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAATATACTACAAGGCTAAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAAGCCCTTCCAGAAATAATTGCCGATATCGTACCAAACTATTCTGATCTTGACCAAACCTCTATAAAAACCAAGCAATGGGGAAAGGGATTCCCTTATTAATAAATGGTTCTGCGGAAAACTGGCTAAGCCATATGTAGAAAGCTGCGAAATGGATCCTTCCCTTACACCTTATACAAAAAATCAATTCAAGATTGGATTTGAAAGATTAAAGCGTTAAACCTAAATCACCATAAAAAACCCTAGTAGAAAACCTAGGCCATACCATTTCAGGACGATAGGCGTGGCCAAGGACTTCATGATTCCAAAACCACCAAAGCAATTGGGCAACAAAAGACAAAATGAACAAATGGGATCTAATTAAGAACTAAAGAGCTCTGCTACAGCAAAAAGGAAGAAACACAGTCAGATGAAACAGGCAACCTACAACATGGCGAGAAAAATTTTCTGCAACTAGCTCATCTGACAAAAGGGCTAATATCCCAGAATCTACAATGAACTTCAAACAAAATTTACAAGGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACCCTGAACAGACACTCTTCAAAAGAAGACAATTTATTGCAGCCAAAAAACACATGTGACAGAAATGCTCTTTCATCAACTGGCCATCAGAGAAATAGCCAAATCAAACCACTATGAGATATCAATCTCACACCAGTTAGAATGCAATCATTAAAAAGTCAGGAAACAAACAGTGCTGGAGAGGGATGCGGGAGAATATAGGAACACTTTTACACTGTGGTGGACTGTAAACTAGTTCAACATTGTGGAAGTCAGTGCTGGCGATTCCTCAGGATCTAGAACTAGAAATAACCATTTGACCCAGCCAGCATTTACTGGGTATATACCCAAAATTGAGTATAAATCATGCTGCCTATAAAGACACATGCACACGTATGTTTTATTGCGGCATCTATTCACAATAGCAAGATTGAAACCACCCAATGTCAACAATGATTAGACGGATTAAGAAAAATGTGGGCACGATTATTTTACACCATTGGGAATACTATTGCAGCCATTAAAAATGATGAGTTCATCATCCTTTGTAGTGGACATGGATGAATTGGAAACAATCATTCTCAGTGTAATAACTATTCGCCAAGAACAAAAAACCAAACACCACATATTCTCACTCATAGGTGGGAAATTAACAATGAGATCACATGGGACACAGGAAGGGGAATATCACACTCTGGCGGACTGTGTGGTGGGGTCCGGGGGAGGGGGGAGGAATGCATTGGAGTGAGATATACCTAATGCTAGAGATGACACATTAGTGGGCTGCAGCGCACCAGCTGGCACATGTGAATACATATGTAACTAAAACCTTGCACAAGTGTGCACAGTACCCTACAAACTTAGAGTATAATTTAAAAAAAAAAAAAACAAAGAATGCTTAAAAATGCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10056:HG3_PB_pbsv_6401:HG4_PB_pbsv_6588:HG3_PB_assemblyticsfalcon_22498:HG4_PB_assemblyticsfalcon_22035:HG2_PB_SVrefine2PB10Xhap12_4819:HG2_PB_HySA_12263:HG2_PB_PB10Xdip_24678;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_6401;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0797766;ClusterMaxSizeDiff=0.0797766;ClusterMaxEditDist=0.188825;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=6510;DistBack=1;DistForward=18213;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=6:13503041-13503050;PctSeqSimilarity=0.9377;PctSizeSimilarity=0.9304;PctRecOverlap=0.9303;SizeDiff=453;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=93;MatchId=4602.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:37:0|1:23:0:2:28:./.:0:0:0:0:0/1:35:7:0/1:225:27:.:6253:.
chr6	13521264	HG3_PB_pbsv_6402	G	GGGGGCAGGGCGCGGTGCGCTCCACGCCTGTATCCCAGCACCTTTGGCAGGCCGAGGCGGTGGATCATAGGTCAGCGAGATCGAGACCATCTGGCTAACAAGTTGAAAAACCCCGTCTCTGCTAAACAAAATACAAAAAATTAGCCGGGCGCGTGGTGGCGGCGCCTGTAGTCCCACGAGCTCGGGAGGCTGAGGCAGTGAGAATGGCGTGAACCCGCCGAAGCGAGCTTGCAGTGAAGCCGAGATTCGCCACTGCATCCGCAGTCCGACCTGGAGCGACAGAGTGAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGCT	20	PASS	ClusterIDs=HG2_PB_pbsv_6579:HG4_PB_assemblyticsfalcon_22036:HG3_PB_assemblyticsfalcon_22499:HG4_PB_HySA_9839:HG4_PB_pbsv_6589:HG3_PB_pbsv_6402:HG2_PB_SVrefine2Falcon1plusDovetail_10057:HG4_PB_SVrefine2Falcon1Dovetail_4016:HG3_PB_HySA_10226:HG3_Ill_GATKHCSBGrefine_4498:HG4_Ill_GATKHCSBGrefine_4634;NumClusterSVs=11;ExactMatchIDs=HG3_PB_pbsv_6402;NumExactMatchSVs=1;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.245014;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=340;DistBack=18213;DistForward=55;DistMin=55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:13521252-13521266;PctSeqSimilarity=0.953;PctSizeSimilarity=0.9824;PctRecOverlap=0.9531;SizeDiff=6;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=96;MatchId=4603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:35:0|1:35:3:7:29:./.:0:0:0:0:0/1:23:12:0/1:11:19:.:.:.
chr6	13718467	HG2_10X_SVrefine210Xhap12_4749	A	AGATCTGGTGGGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCACCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	20	PASS	ClusterIDs=HG4_PB_HySA_9840:HG2_PB_pbsv_6582:HG3_PB_assemblyticsfalcon_22501:HG4_PB_assemblyticsfalcon_22037:HG3_PB_pbsv_6404:HG2_PB_HySA_12265:HG4_PB_pbsv_6591:HG2_PB_assemblyticsPBcR_21838:HG2_PB_PB10Xdip_24682:HG2_PB_PB10Xdip_24681:HG3_PB_HySA_10229:HG3_Ill_MetaSV_4402:HG3_Ill_GATKHCSBGrefine_4501:HG2_PB_SVrefine2PB10Xhap12_4821:HG2_Ill_MetaSV_4225:HG2_Ill_GATKHCSBGrefine_4578:HG2_10X_SVrefine210Xhap12_4749:HG4_Ill_MetaSV_4395:HG4_Ill_GATKHCSBGrefine_4637:HG2_PB_SVrefine2PBcRplusDovetail_9341:HG2_PB_SVrefine2Falcon2Bionano_3302:HG2_PB_SVrefine2Falcon1plusDovetail_10059;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4749:HG2_Ill_GATKHCSBGrefine_4578:HG2_Ill_MetaSV_4225:HG2_PB_SVrefine2PB10Xhap12_4821:HG3_Ill_GATKHCSBGrefine_4501:HG3_Ill_MetaSV_4402;NumExactMatchSVs=6;ClusterMaxShiftDist=0.125413;ClusterMaxSizeDiff=0.125413;ClusterMaxEditDist=0.22293;PBcalls=15;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=305;DistBack=6344;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=6:13718468-13718481;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4604.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:1/1:0:33:0:14:./.:0:0:0:0:1/1:0:19:1/1:2:62:.:.:.
chr6	13925300	HG4_Ill_GATKHCSBGrefine_4641	G	GGGCGGGGTGGAGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGCGGGGCCCGCCCGGCTCGCGGAGGGAGGGGTGCCCGCACTCGGCTGCGCCCGAGTCCCCGGGGGCCCGTCCCCACCGAGGAAACGGACGGCGGCCGCCCCCGACGCCGCTGCCGCCGCCGCCGCCCCCGCCGCCCCCGCCGCCCCCGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_24685:HG4_PB_pbsv_6593:HG3_PB_HySA_10236:HG3_PB_pbsv_6407:HG4_PB_assemblyticsfalcon_22039:HG2_PB_pbsv_6585:HG2_PB_assemblyticsPBcR_21840:HG3_PB_assemblyticsfalcon_22504:HG3_Ill_SVrefine2DISCOVARDovetail_5006:HG2_Ill_MetaSV_4228:HG2_PB_SVrefine2Falcon2Bionano_3303:HG2_10X_SVrefine210Xhap12_4752:HG4_PB_SVrefine2PBcRDovetail_3291:HG4_Ill_SVrefine2DISCOVARDovetail_4895:HG4_Ill_MetaSV_4397:HG4_Ill_GATKHCSBGrefine_4641:HG4_Ill_250bpfermikitraw_9300:HG2_PB_SVrefine2PB10Xhap12_4823:HG2_Ill_SVrefine2DISCOVARplusDovetail_10946:HG2_PB_SVrefine2Falcon1plusDovetail_10061:HG2_PB_SVrefine2PBcRplusDovetail_9342:HG3_Ill_MetaSV_4405:HG2_PB_PB10Xdip_24684;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10946:HG2_PB_SVrefine2PB10Xhap12_4823:HG4_Ill_250bpfermikitraw_9300:HG4_Ill_GATKHCSBGrefine_4641:HG4_Ill_MetaSV_4397:HG4_Ill_SVrefine2DISCOVARDovetail_4895;NumExactMatchSVs=6;ClusterMaxShiftDist=0.14248;ClusterMaxSizeDiff=0.14248;ClusterMaxEditDist=0.290155;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=190;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=6:13925301-13925303;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4605.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:0:23:1:18:./.:0:0:0:0:1/1:0:20:./.:.:.:.:.:.
chr6	14086559	HG3_Ill_150bpfermikitraw_8724	A	ATATATATATATGTATATATATACGTATATATATATACGTATATATATGTATATATATACGTATATATATACG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8662:HG3_Ill_GATKHC_11010:HG2_PB_pbsv_6586:HG3_PB_HySA_10237:HG3_PB_pbsv_6408:HG3_Ill_GATKHCSBGrefine_4504:HG2_Ill_GATKHC_11014:HG2_Ill_GATKHCSBGrefine_4582:HG3_Ill_250bpfermikitraw_8937:HG3_Ill_150bpfermikitraw_8724:HG2_Ill_250bpfermikitraw_9244;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8662:HG3_Ill_250bpfermikitraw_8937:HG3_Ill_150bpfermikitraw_8724:HG2_Ill_250bpfermikitraw_9244;NumExactMatchSVs=4;ClusterMaxShiftDist=0.208589;ClusterMaxSizeDiff=0.208589;ClusterMaxEditDist=0.270968;PBcalls=3;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=53638;DistForward=74;DistMin=74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=70;REFWIDENED=6:14086560-14086629;PctSeqSimilarity=0.9314;PctSizeSimilarity=0.878;PctRecOverlap=0.6506;SizeDiff=-10;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=82;MatchId=4606.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:27:1:4:26:./.:0:0:0:0:0/1:32:22:./.:.:.:.:.:.
chr6	14152264	HG2_PB_SVrefine2PB10Xhap12_4824	C	CTCTCCTCCCCTCCCCTCTCCCTCTCCTCCCCTCCCCCCACCTCTCCTCCCCTCCCCTCTCCTCCCCTCCCCCTCCTCCTCCCCCTTCTCCTCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4754:HG4_Ill_SVrefine2DISCOVARDovetail_4898:HG2_PB_SVrefine2PBcRplusDovetail_9343:HG2_PB_SVrefine2PB10Xhap12_4824:HG2_Ill_SVrefine2DISCOVARplusDovetail_10951:HG2_10X_SVrefine210Xhap12_4755:HG2_PB_assemblyticsPBcR_21842:HG4_PB_HySA_9847:HG2_PB_HySA_12272:HG2_PB_HySA_12271:HG4_PB_HySA_9846:HG3_PB_pbsv_6410:HG2_PB_HySA_12270:HG3_PB_HySA_10240:HG2_PB_PB10Xdip_24687:HG2_PB_PB10Xdip_24686:HG4_Ill_GATKHCSBGrefine_4642:HG3_Ill_SVrefine2DISCOVARDovetail_5008:HG3_Ill_GATKHCSBGrefine_4506;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4755:HG2_Ill_SVrefine2DISCOVARplusDovetail_10951:HG2_PB_SVrefine2PB10Xhap12_4824:HG2_PB_SVrefine2PBcRplusDovetail_9343:HG4_Ill_SVrefine2DISCOVARDovetail_4898;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0855615;ClusterMaxSizeDiff=0.0631579;ClusterMaxEditDist=0.259067;PBcalls=12;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=93;DistBack=4;DistForward=5809;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=44;REFWIDENED=6:14152235-14152278;PctSeqSimilarity=0.9681;PctSizeSimilarity=0.9688;PctRecOverlap=0.6701;SizeDiff=-3;StartDistance=30;EndDistance=30;GTMatch=0;TruScore=86;MatchId=4607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:38:1:5:./.:0:0:0:0:./.:1:6:./.:.:.:.:.:.
chr6	15415850	HG2_Ill_GATKHCSBGrefine_4590	T	TCGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGA	10	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_4590:HG3_Ill_GATKHC_11026:HG3_Ill_GATKHCSBGrefine_4515:HG3_Ill_150bpfermikitraw_8739:HG4_Ill_GATKHC_11101:HG4_Ill_GATKHCSBGrefine_4647:HG2_Ill_GATKHC_11031;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4590:HG4_Ill_GATKHC_11101:HG4_Ill_GATKHCSBGrefine_4647:HG2_Ill_GATKHC_11031;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0196078;PBcalls=0;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=50;DistBack=146076;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=189;REFWIDENED=6:15415788-15415976;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4609.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:24:./.:25:4:6:14:./.:0:0:0:0:0/1:27:9:./.:.:.:.:.:.
chr6	15688939	HG2_Ill_breakscan11_3663	T	TTCACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4018:HG3_PB_pbsv_6415:HG2_Ill_breakscan11_3663:HG2_PB_pbsv_6592:HG4_PB_assemblyticsfalcon_22056:HG2_PB_HySA_12290;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_breakscan11_3663;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115899;ClusterMaxSizeDiff=0.115899;ClusterMaxEditDist=0.234957;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=340;DistBack=10731;DistForward=36058;DistMin=10731;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:15688940-15688954;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9884;PctRecOverlap=0.9884;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4610.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:42:0|1:40:0:1:35:./.:0:0:0:0:./.:27:3:0/1:11:39:.:.:.
chr6	17010724	HG3_Ill_GATKHC_11040	T	TCCGACTCTTGCCTTCTGTTTTCAGCCATACTTCTGGAAAAATCTGTCTCCCCTCACTGATC	20	PASS	ClusterIDs=HG4_PB_HySA_9869:HG3_PB_HySA_10260:HG4_PB_pbsv_6602:HG4_Ill_Krunchall_9793:HG3_PB_pbsv_6419:HG4_Ill_GATKHC_11115:HG2_PB_pbsv_6598:HG4_Ill_GATKHCSBGrefine_4651:HG3_Ill_Krunchall_9226:HG3_Ill_GATKHC_11040:HG3_Ill_GATKHCSBGrefine_4518:HG3_Ill_250bpfermikitraw_8963:HG2_PB_HySA_12306:HG2_Ill_manta_1887:HG2_Ill_Krunchall_9457:HG2_Ill_GATKHC_11046:HG2_Ill_GATKHCSBGrefine_4593:HG2_Ill_250bpfermikitraw_9271;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9271:HG2_Ill_GATKHCSBGrefine_4593:HG2_Ill_GATKHC_11046:HG2_Ill_Krunchall_9457:HG2_Ill_manta_1887:HG2_PB_HySA_12306:HG3_Ill_250bpfermikitraw_8963:HG3_Ill_GATKHCSBGrefine_4518:HG3_Ill_GATKHC_11040:HG3_Ill_Krunchall_9226:HG4_Ill_GATKHCSBGrefine_4651:HG4_Ill_GATKHC_11115:HG4_Ill_Krunchall_9793;NumExactMatchSVs=13;ClusterMaxShiftDist=0.107692;ClusterMaxSizeDiff=0.0923077;ClusterMaxEditDist=0.298507;PBcalls=6;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=61;DistBack=0;DistForward=5172;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=63;REFWIDENED=6:17010725-17010787;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4611.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:0|1:19:2:1:16:./.:0:0:0:0:0/1:22:17:./.:.:.:.:.:.
chr6	17249954	HG2_Ill_GATKHCSBGrefine_4594	G	GTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTGACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGACTACAGGTGCCCACCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGACGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTCTTGGCCAGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACAATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCTGGGAGGTGGAGCT	20	PASS	ClusterIDs=HG2_PB_HySA_12309:HG2_PB_pbsv_6599:HG3_PB_pbsv_6420:HG4_PB_pbsv_6603:HG4_PB_assemblyticsfalcon_22068:HG2_PB_assemblyticsPBcR_21866:HG2_PB_PB10Xdip_25131:HG2_PB_PB10Xdip_25130:HG4_PB_HySA_9873:HG4_PB_SVrefine2PBcRDovetail_3299:HG4_Ill_SVrefine2DISCOVARDovetail_4908:HG3_Ill_SVrefine2DISCOVARDovetail_5023:HG3_Ill_MetaSV_4407:HG3_Ill_GATKHCSBGrefine_4519:HG2_PB_SVrefine2PBcRplusDovetail_9348:HG2_PB_SVrefine2PB10Xhap12_4833:HG2_PB_SVrefine2Falcon1plusDovetail_10066:HG2_Ill_SVrefine2DISCOVARplusDovetail_10961:HG2_Ill_MetaSV_4232:HG2_Ill_GATKHCSBGrefine_4594:HG2_10X_SVrefine210Xhap12_4766:HG4_Ill_MetaSV_4400:HG4_Ill_GATKHCSBGrefine_4652:HG3_PB_HySA_10264;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4766:HG2_Ill_GATKHCSBGrefine_4594:HG2_Ill_MetaSV_4232:HG2_Ill_SVrefine2DISCOVARplusDovetail_10961:HG2_PB_SVrefine2Falcon1plusDovetail_10066:HG2_PB_SVrefine2PB10Xhap12_4833:HG2_PB_SVrefine2PBcRplusDovetail_9348:HG3_Ill_GATKHCSBGrefine_4519:HG3_Ill_MetaSV_4407:HG3_Ill_SVrefine2DISCOVARDovetail_5023:HG4_Ill_SVrefine2DISCOVARDovetail_4908;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0654628;ClusterMaxSizeDiff=0.0654628;ClusterMaxEditDist=0.165198;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=437;DistBack=11130;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=6:17249955-17249961;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4612.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:1:35:0:11:./.:0:0:0:0:1/1:0:21:0/1:9:68:.:.:.
chr6	17587281	HG2_Ill_GATKHCSBGrefine_4597	T	TCGCACACCCATATATATACACATATACATACGCACACCCATATATATACACATATACGCACACCCATATATATACACATATACATACA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25133:HG3_PB_pbsv_6422:HG2_PB_pbsv_6601:HG4_Ill_scalpel_6400:HG4_PB_pbsv_6604:HG4_Ill_GATKHC_11119:HG4_Ill_GATKHCSBGrefine_4654:HG3_Ill_scalpel_6617:HG3_Ill_GATKHC_11043:HG3_Ill_GATKHCSBGrefine_4522:HG2_Ill_scalpel_6544:HG2_Ill_GATKHC_11052:HG2_Ill_GATKHCSBGrefine_4597:HG2_Ill_250bpfermikitraw_9274:HG2_PB_HySA_12312:HG4_PB_HySA_9874:HG3_PB_HySA_10269:HG2_PB_PB10Xdip_25134;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9274:HG2_Ill_GATKHCSBGrefine_4597:HG2_Ill_GATKHC_11052:HG2_Ill_scalpel_6544:HG3_Ill_GATKHCSBGrefine_4522:HG3_Ill_GATKHC_11043:HG3_Ill_scalpel_6617:HG4_Ill_GATKHCSBGrefine_4654:HG4_Ill_GATKHC_11119:HG4_Ill_scalpel_6400;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0765027;ClusterMaxSizeDiff=0.0765027;ClusterMaxEditDist=0.245989;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=184;DistForward=106;DistMin=106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=46;REFWIDENED=6:17587280-17587328;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4613.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:57:1/1:5:30:2:21:./.:0:0:0:0:./.:0:8:./.:.:.:.:.:.
chr6	18470148	HG2_PB_SVrefine2Falcon1plusDovetail_10068	T	TAAAAATACTTTTGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_12321:HG2_PB_pbsv_6602:HG2_Ill_breakscan11_3665:HG4_PB_pbsv_6607:HG4_PB_HySA_9888:HG2_Ill_MetaSV_4234:HG4_PB_SVrefine2PBcRDovetail_3301:HG2_PB_SVrefine2Falcon1plusDovetail_10068:HG2_Ill_GATKHCSBGrefine_4599:HG2_PB_SVrefine2Falcon2Bionano_3308;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10068;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0958084;ClusterMaxSizeDiff=0.0898204;ClusterMaxEditDist=0.20373;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=702;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:18470149-18470163;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:./.:21:17:5:5:./.:0:0:0:0:0/1:25:13:0/1:8:27:.:.:.
chr6	18899149	HG4_Ill_GATKHCSBGrefine_4661	A	ATCATTCTTTTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10069:HG2_PB_PB10Xdip_25163:HG4_PB_pbsv_6609:HG2_PB_HySA_12342:HG3_PB_pbsv_6427:HG2_Ill_breakscan11_3666:HG2_PB_assemblyticsPBcR_21883:HG3_PB_HySA_10282:HG4_PB_HySA_9897:HG4_PB_SVrefine2PBcRDovetail_3303:HG4_Ill_SVrefine2DISCOVARDovetail_4917:HG3_Ill_MetaSV_4410:HG4_Ill_MetaSV_4402:HG4_Ill_GATKHCSBGrefine_4661:HG3_Ill_GATKHCSBGrefine_4528:HG2_PB_SVrefine2PBcRplusDovetail_9351:HG2_PB_SVrefine2PB10Xhap12_4836:HG2_PB_SVrefine2Falcon2Bionano_3309:HG2_Ill_MetaSV_4235:HG2_Ill_GATKHCSBGrefine_4602:HG2_10X_SVrefine210Xhap12_4769;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4602:HG2_Ill_MetaSV_4235:HG2_PB_SVrefine2Falcon2Bionano_3309:HG2_PB_SVrefine2PB10Xhap12_4836:HG2_PB_SVrefine2PBcRplusDovetail_9351:HG3_Ill_GATKHCSBGrefine_4528:HG4_Ill_GATKHCSBGrefine_4661:HG4_Ill_MetaSV_4402;NumExactMatchSVs=8;ClusterMaxShiftDist=0.230769;ClusterMaxSizeDiff=0.230769;ClusterMaxEditDist=0.301325;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=314;DistBack=10293;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=27;REFWIDENED=6:18899150-18899176;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4616.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:./.:1:4:0:2:./.:0:0:0:0:1/1:0:28:1/1:1:50:.:.:.
chr6	19137093	HG2_PB_SVrefine2PB10Xhap12_4837	G	GCTGTTTCTGTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_12350:HG3_PB_pbsv_6429:HG2_PB_PB10Xdip_25164:HG4_PB_pbsv_6610:HG2_PB_HySA_12352:HG2_PB_pbsv_6606:HG2_Ill_breakscan11_3667:HG2_PB_assemblyticsPBcR_21890:HG4_PB_HySA_9901:HG4_PB_SVrefine2Falcon1Dovetail_4021:HG3_Ill_MetaSV_4412:HG4_Ill_MetaSV_4403:HG4_Ill_GATKHCSBGrefine_4663:HG3_Ill_GATKHCSBGrefine_4530:HG2_PB_SVrefine2PBcRplusDovetail_9352:HG2_PB_SVrefine2PB10Xhap12_4837:HG2_PB_SVrefine2Falcon2Bionano_3310:HG2_Ill_MetaSV_4236:HG2_PB_SVrefine2Falcon1plusDovetail_10070:HG2_PB_HySA_12351;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_MetaSV_4236:HG2_PB_SVrefine2Falcon2Bionano_3310:HG2_PB_SVrefine2PB10Xhap12_4837:HG2_PB_SVrefine2PBcRplusDovetail_9352:HG3_Ill_GATKHCSBGrefine_4530:HG4_Ill_GATKHCSBGrefine_4663:HG4_Ill_MetaSV_4403;NumExactMatchSVs=7;ClusterMaxShiftDist=0.196018;ClusterMaxSizeDiff=0.196018;ClusterMaxEditDist=0.258567;PBcalls=14;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=322;DistBack=23590;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=6:19137094-19137113;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4617.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:72:1/1:0:7:0:7:./.:0:0:0:0:1/1:0:23:1/1:2:61:.:.:.
chr6	19713567	HG2_PB_PB10Xdip_25168	TATATATTTT	TATATATATATATTATATATATATATATATATATAAAATATATATATATAAAAATATATATATATATAAATATTATATATATATATT	10	PASS	ClusterIDs=HG3_PB_pbsv_6434:HG2_PB_SVrefine2Falcon2Bionano_3313:HG2_PB_PB10Xdip_25168:HG2_PB_pbsv_6611;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_25168;NumExactMatchSVs=1;ClusterMaxShiftDist=0.156425;ClusterMaxSizeDiff=0.156425;ClusterMaxEditDist=0.218579;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=77;DistBack=7;DistForward=26;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=6:19713566-19713577;PctSeqSimilarity=0.9158;PctSizeSimilarity=0.828;PctRecOverlap=0.9247;SizeDiff=-16;StartDistance=-6;EndDistance=3;GTMatch=0;TruScore=88;MatchId=4618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:0|1:23:3:0:16:./.:0:0:0:0:0/1:8:6:./.:.:.:.:.:.
chr6	19730779	HG2_Ill_150bpfermikitraw_8718	C	CACTTGTAGTTGAGGCTGACAAGCAAAAGCCCCTGGATAGCAATGTTTGTTTTCTCTCACCAGCTG	20	PASS	ClusterIDs=HG3_PB_HySA_10297:HG2_PB_pbsv_6612:HG3_PB_pbsv_6435:HG3_Ill_svaba_8632:HG2_PB_HySA_12360:HG2_Ill_breakscan11_3668:HG3_Ill_manta_1562:HG3_Ill_Krunchall_9259:HG3_Ill_GATKHC_11080:HG3_Ill_GATKHCSBGrefine_4534:HG3_Ill_Cortex_3131:HG3_Ill_250bpfermikitraw_8995:HG3_Ill_150bpfermikitraw_8779:HG2_Ill_svaba_8550:HG2_Ill_manta_1892:HG2_Ill_Krunchall_9487:HG2_Ill_GATKHC_11094:HG2_Ill_GATKHCSBGrefine_4606:HG2_Ill_Cortex_7528:HG2_Ill_250bpfermikitraw_9306:HG2_Ill_150bpfermikitraw_8718:HG2_PB_SVrefine2PBcRplusDovetail_9355:HG3_Ill_SVrefine2DISCOVARDovetail_5040:HG2_PB_SVrefine2Falcon2Bionano_3314:HG2_PB_SVrefine2Falcon1plusDovetail_10074:HG2_10X_SVrefine210Xhap12_4772;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8718:HG2_Ill_250bpfermikitraw_9306:HG2_Ill_Cortex_7528:HG2_Ill_GATKHCSBGrefine_4606:HG2_Ill_GATKHC_11094:HG2_Ill_Krunchall_9487:HG2_Ill_manta_1892:HG2_Ill_svaba_8550:HG3_Ill_150bpfermikitraw_8779:HG3_Ill_250bpfermikitraw_8995:HG3_Ill_Cortex_3131:HG3_Ill_GATKHCSBGrefine_4534:HG3_Ill_GATKHC_11080:HG3_Ill_Krunchall_9259:HG3_Ill_manta_1562:HG3_Ill_svaba_8632;NumExactMatchSVs=16;ClusterMaxShiftDist=0.258065;ClusterMaxSizeDiff=0.193548;ClusterMaxEditDist=0.370968;PBcalls=7;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=65;DistBack=21;DistForward=34326;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=67;REFWIDENED=6:19730735-19730801;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:30:0|1:23:2:1:27:./.:0:0:0:0:0/1:25:26:./.:.:.:.:.:.
chr6	19940754	HG2_PB_PB10Xdip_25170	G	GGTGGGGGGGTCAGCCCCCGCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGTTGGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGTTGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGAGGTCAGCCCCCCCGCCCGGCCAGCAGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCTCTCTGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGGA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3305:HG3_PB_pbsv_6437:HG2_PB_PB10Xdip_25171:HG2_PB_PB10Xdip_25170:HG4_Ill_GATKHCSBGrefine_4665:HG2_PB_SVrefine2Falcon1plusDovetail_10076:HG2_PB_SVrefine2Falcon2Bionano_3316:HG2_PB_SVrefine2PBcRplusDovetail_9357:HG2_PB_SVrefine2PB10Xhap12_4844;NumClusterSVs=9;ExactMatchIDs=HG2_PB_PB10Xdip_25170:HG2_PB_PB10Xdip_25171;NumExactMatchSVs=2;ClusterMaxShiftDist=0.047619;ClusterMaxSizeDiff=0.042328;ClusterMaxEditDist=0.145503;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=377;DistBack=-1;DistForward=21;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=127;REFWIDENED=6:19940676-19940802;PctSeqSimilarity=0.9987;PctSizeSimilarity=0.9974;PctRecOverlap=0.9947;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4620.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:1/1:1:26:2:14:./.:0:0:0:0:1/1:0:26:0/1:4:25:.:.:.
chr6	20887906	HG2_10X_SVrefine210Xhap12_4778	T	TAGGATTACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGTAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25174:HG3_PB_pbsv_6442:HG2_PB_pbsv_6618:HG4_PB_pbsv_6618:HG2_PB_assemblyticsPBcR_21908:HG4_Ill_GATKHCSBGrefine_4670:HG4_Ill_MetaSV_4406:HG3_Ill_MetaSV_4419:HG4_PB_SVrefine2PBcRDovetail_3308:HG2_PB_SVrefine2PBcRplusDovetail_9359:HG2_PB_SVrefine2PB10Xhap12_4847:HG2_PB_SVrefine2Falcon1plusDovetail_10078:HG2_10X_SVrefine210Xhap12_4778:HG2_PB_SVrefine2Falcon2Bionano_3318:HG2_Ill_GATKHCSBGrefine_4610:HG2_Ill_MetaSV_4242:HG3_Ill_GATKHCSBGrefine_4541:HG3_PB_HySA_10309:HG2_PB_HySA_12373:HG4_PB_HySA_9915:HG2_PB_PB10Xdip_25175;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4778:HG2_PB_SVrefine2Falcon1plusDovetail_10078:HG2_PB_SVrefine2PB10Xhap12_4847:HG2_PB_SVrefine2PBcRplusDovetail_9359;NumExactMatchSVs=4;ClusterMaxShiftDist=0.127726;ClusterMaxSizeDiff=0.127726;ClusterMaxEditDist=0.209408;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=318;DistBack=23412;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=6:20887907-20887919;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4621.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:101:1/1:1:28:0:43:./.:0:0:0:0:1/1:0:22:1/1:2:68:.:.:.
chr6	21353681	HG3_Ill_GATKHC_11097	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGATATTTT	20	PASS	ClusterIDs=HG2_PB_pbsv_6619:HG2_PB_assemblyticsPBcR_21910:HG4_PB_HySA_9919:HG4_PB_pbsv_6619:HG4_Ill_svaba_8652:HG3_Ill_svaba_8642:HG3_Ill_GATKHC_11097:HG2_PB_PB10Xdip_25177:HG2_PB_PB10Xdip_25176:HG2_Ill_svaba_8561:HG2_Ill_GATKHC_11111:HG2_PB_HySA_12378;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHC_11111:HG2_Ill_svaba_8561:HG2_PB_PB10Xdip_25176:HG2_PB_PB10Xdip_25177:HG3_Ill_GATKHC_11097:HG3_Ill_svaba_8642:HG4_Ill_svaba_8652;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0431655;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.128571;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=68;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=6:21353682-21353694;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9855;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4622.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:62:1/1:3:14:2:16:./.:0:0:0:0:1/1:0:13:./.:.:.:.:.:.
chr6	23394275	HG2_Ill_150bpfermikitraw_8747	G	GAAAGGGGAAAGGAAAGAGGAAGGAAGGGAGGAAGGGAGGGGAAAGGAAAGGAGGAAAGGAGTGAGGGAAGAA	20	PASS	ClusterIDs=HG2_Ill_scalpel_6592:HG4_Ill_250bpfermikitraw_9376:HG4_PB_pbsv_6632:HG4_Ill_150bpfermikitraw_8964:HG3_Ill_250bpfermikitraw_9018:HG2_Ill_250bpfermikitraw_9337:HG2_Ill_150bpfermikitraw_8747:HG4_Ill_manta_1651:HG4_Ill_scalpel_6449:HG3_Ill_scalpel_6667;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8747:HG2_Ill_250bpfermikitraw_9337:HG3_Ill_250bpfermikitraw_9018:HG4_Ill_150bpfermikitraw_8964:HG4_Ill_250bpfermikitraw_9376;NumExactMatchSVs=5;ClusterMaxShiftDist=0.184211;ClusterMaxSizeDiff=0.184211;ClusterMaxEditDist=0.263158;PBcalls=1;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=1;DistForward=4;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=298;REFWIDENED=6:23394073-23394370;PctSeqSimilarity=0.9542;PctSizeSimilarity=0.9306;PctRecOverlap=0.8767;SizeDiff=5;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=92;MatchId=4623.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:33:./.:23:32:8:0:./.:0:0:0:0:0/1:4:25:./.:.:.:.:.:.
chr6	23620207	HG2_PB_SVrefine2Falcon2Bionano_3326	G	GGGGAGGGGGGAGAGGGGGGGAGAGAGAGAGGGGGAGGGGGCGGGGGGGAAGAGATGGGGAAGAGGGGGGAGAGATGGGGGAAGGGGGGGAGAGAGGGGGGAGAGAGAGGGAGGGGGAGAGACAGGGAGGGGAGAGAGAGAGAGGGAGAGGGGACAGAGAGAGAGGGAGGGGGGACAGAGAGAGAGGGAGGGGGGACAGAGAGAGGGAGGGGGGACAGAGAGAGGGAGGGAGAGAGAGGGAGGGGGAGAGAGAGGGAGGGAGAGAGAGAGAAAGAGAGAGGGAGGGAGGGAGAAAGAAAGAGAGAGAGGGAGGGAGGGAGAGACACTGAGGGAGAGGGAGGGAGAGAGGGAGGGAGGCAGAGAGAAAGAGAGGGAGGGAGGCAGAGAGAAAGAGAGGGAGGGAGGGAGAGAGAGGGAGGGAGAGGGAGGGAGAGAGAGGGAGGGAGGGAGGTAGAGAGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGATAGGGAGGGAGAGGGAGGGAAGGAGAGAGGGAGGGAAGGAGAGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGATAGAGAGGGAGGGAGGGAGATAGAGAGGGAGGGAGGGAGATAGAGAGGGAGGGAGATAGGGAGGGAGGCAGATAGAGAGGGAGGGAGGCAGATAGGGAGGGAGGGAGAGAGAGGGAGGGAGGGAGAGAGAGAGAGGGAGGGAGGGAGAGAGAGAGGGAGAGAGAGAGGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4857:HG3_PB_pbsv_6454:HG2_PB_SVrefine2Falcon1plusDovetail_10087:HG2_PB_SVrefine2PB10Xhap12_4858:HG2_PB_pbsv_6634:HG2_PB_SVrefine2Falcon2Bionano_3326:HG2_PB_SVrefine2PBcRplusDovetail_9367:HG3_PB_SVrefine2Falcon1Dovetail_4094;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3326;NumExactMatchSVs=1;ClusterMaxShiftDist=0.128909;ClusterMaxSizeDiff=0.128909;ClusterMaxEditDist=0.312312;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=804;DistBack=106302;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=196;REFWIDENED=6:23620208-23620403;PctSeqSimilarity=0.9789;PctSizeSimilarity=0.9988;PctRecOverlap=0.7615;SizeDiff=-1;StartDistance=-192;EndDistance=-192;GTMatch=1;TruScore=91;MatchId=4624.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:65:1/1:1:26:0:25:./.:0:0:0:0:./.:0:0:0/1:7:53:.:.:.
chr6	23728641	HG4_Ill_manta_1653	CTTTTGTGCTA	TTTATACATACAACATGTATATGTATATACATATATATGTATGTATATACATACAACATGTATATACATACATATATATACAATTAATATATACAACATATAT	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4423:HG4_Ill_Krunchall_9862:HG4_Ill_svaba_8678:HG3_Ill_svaba_8663:HG2_Ill_svaba_8587:HG3_Ill_Krunchall_9299:HG4_Ill_GATKHCSBGrefine_4678:HG3_Ill_GATKHCSBGrefine_4550:HG2_Ill_GATKHCSBGrefine_4618:HG2_Ill_Krunchall_9529:HG3_PB_HySA_10342:HG2_PB_HySA_12417:HG4_Ill_250bpfermikitraw_9383:HG4_Ill_150bpfermikitraw_8971:HG3_Ill_250bpfermikitraw_9025:HG3_Ill_150bpfermikitraw_8807:HG2_Ill_250bpfermikitraw_9344:HG2_Ill_150bpfermikitraw_8754:HG3_PB_SVrefine2Falcon1Dovetail_4096:HG4_PB_SVrefine2Falcon1Dovetail_4025:HG4_Ill_manta_1653:HG3_Ill_manta_1570:HG3_Ill_Spiral_7320:HG3_Ill_SVrefine2DISCOVARDovetail_5056:HG2_PB_SVrefine2Falcon2Bionano_3328:HG2_PB_SVrefine2Falcon1plusDovetail_10089:HG2_Ill_manta_1898:HG2_Ill_SpiralSDKrefine_14452:HG2_10X_SVrefine210Xhap12_4787:HG4_PB_pbsv_6635:HG4_Ill_MetaSV_4411;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4787:HG2_Ill_SpiralSDKrefine_14452:HG2_Ill_manta_1898:HG2_PB_SVrefine2Falcon1plusDovetail_10089:HG2_PB_SVrefine2Falcon2Bionano_3328:HG3_Ill_SVrefine2DISCOVARDovetail_5056:HG3_Ill_Spiral_7320:HG3_Ill_manta_1570:HG4_Ill_manta_1653:HG4_PB_SVrefine2Falcon1Dovetail_4025;NumExactMatchSVs=10;ClusterMaxShiftDist=0.273224;ClusterMaxSizeDiff=0.273224;ClusterMaxEditDist=0.361582;PBcalls=7;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=92;DistBack=-1;DistForward=2841;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:23728652-23728640;PctSeqSimilarity=0.9758;PctSizeSimilarity=0.9892;PctRecOverlap=0.9029;SizeDiff=-1;StartDistance=-8;EndDistance=2;GTMatch=0;TruScore=95;MatchId=4625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:43:./.:14:29:11:12:./.:0:0:0:0:0/1:34:17:./.:.:.:.:.:.
chr6	23731530	HG2_Ill_250bpfermikitraw_9345	T	TATATATATTATATATAATATATATTATATATAATATATATAATATATATTATATATAACATATATATTATATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_6636:HG4_Ill_svaba_8679:HG3_PB_HySA_10344:HG3_PB_pbsv_6457:HG3_Ill_Krunchall_9300:HG2_PB_assemblyticsPBcR_21937:HG4_Ill_GATKHC_11202:HG3_PB_HySA_10343:HG2_PB_pbsv_6637:HG4_Ill_GATKHCSBGrefine_4679:HG4_Ill_250bpfermikitraw_9384:HG4_Ill_150bpfermikitraw_8972:HG3_Ill_svaba_8664:HG3_Ill_250bpfermikitraw_9026:HG2_Ill_svaba_8588:HG2_Ill_scalpel_6598:HG2_Ill_GATKHC_11137:HG2_Ill_GATKHCSBGrefine_4619:HG2_Ill_250bpfermikitraw_9345:HG2_Ill_150bpfermikitraw_8755:HG3_Ill_GATKHC_11117:HG3_Ill_GATKHCSBGrefine_4551;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8755:HG2_Ill_250bpfermikitraw_9345:HG2_Ill_GATKHCSBGrefine_4619:HG2_Ill_GATKHC_11137:HG2_Ill_scalpel_6598:HG2_Ill_svaba_8588:HG3_Ill_250bpfermikitraw_9026:HG3_Ill_svaba_8664:HG4_Ill_150bpfermikitraw_8972:HG4_Ill_250bpfermikitraw_9384:HG4_Ill_GATKHCSBGrefine_4679:HG4_Ill_GATKHC_11202:HG4_Ill_svaba_8679;NumExactMatchSVs=13;ClusterMaxShiftDist=0.309859;ClusterMaxSizeDiff=0.309859;ClusterMaxEditDist=0.316547;PBcalls=6;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=75;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=24;REFWIDENED=6:23731529-23731555;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4626.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:41:1|0:9:37:23:1:./.:0:0:0:0:0/1:16:16:./.:.:.:.:.:.
chr6	23779486	HG2_PB_pbsv_6639	T	TTGGCCGGGCGCGCGTGGCTCACGCTGCTAATCCCAGCCACTTTGGGAGCGAGGCGCGCGCGGATCACGAGGTCCAGGAGATCCGAACCATCCTGGCCTAAAACGGGCGTTAAACCCCGTCTTACTAAAAAATACAAAAATTAGCCGGGCGTATGGCGGGTGCCTGTAGTCCAGCTACTTGGGAGCTGAGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGAGCGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAGACTCCGTCTTTCAAAAAAAAAAAAAAAAAAAAAAAGAAGACA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10091:HG2_PB_pbsv_6639:HG4_PB_pbsv_6639:HG3_PB_SVrefine2Falcon1Dovetail_4098;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_6639;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0746501;ClusterMaxSizeDiff=0.0715397;ClusterMaxEditDist=0.184049;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=318;DistBack=11;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:23779487-23779487;PctSeqSimilarity=0.9516;PctSizeSimilarity=0.9906;PctRecOverlap=0.953;SizeDiff=3;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=96;MatchId=4627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:27:0|1:32:0:0:25:./.:0:0:0:0:./.:38:2:0/1:6:9:.:.:.
chr6	23978343	HG2_Ill_MetaSV_4253	G	GAAAAATGACAACCAGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_6642:HG3_PB_HySA_10354:HG3_PB_pbsv_6462:HG4_PB_HySA_9947:HG2_PB_pbsv_6642:HG2_PB_assemblyticsPBcR_21943:HG3_PB_assemblyticsfalcon_22603:HG4_PB_assemblyticsfalcon_22138:HG2_PB_PB10Xdip_25196:HG2_PB_PB10Xdip_25195:HG3_PB_SVrefine2Falcon1Dovetail_4102:HG2_10X_SVrefine210Xhap12_4791:HG4_Ill_MetaSV_4415:HG3_Ill_MetaSV_4426:HG3_Ill_GATKHCSBGrefine_4554:HG2_PB_SVrefine2PBcRplusDovetail_9372:HG2_PB_SVrefine2PB10Xhap12_4863:HG2_PB_SVrefine2Falcon2Bionano_3331:HG2_Ill_MetaSV_4253:HG4_PB_SVrefine2PBcRDovetail_3320:HG2_PB_SVrefine2Falcon1plusDovetail_10095:HG2_Ill_GATKHCSBGrefine_4621:HG2_Ill_breakscan11_3669;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_MetaSV_4253:HG2_PB_SVrefine2Falcon2Bionano_3331:HG2_PB_SVrefine2PB10Xhap12_4863:HG2_PB_SVrefine2PBcRplusDovetail_9372:HG3_Ill_GATKHCSBGrefine_4554:HG3_Ill_MetaSV_4426:HG4_Ill_MetaSV_4415;NumExactMatchSVs=7;ClusterMaxShiftDist=0.186709;ClusterMaxSizeDiff=0.186709;ClusterMaxEditDist=0.28481;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=320;DistBack=18967;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=6:23978344-23978361;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4628.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:86:./.:0:0:0:0:./.:0:0:0:0:1/1:0:17:1/1:2:89:.:.:.
chr6	24649209	HG3_Ill_GATKHCSBGrefine_4561	T	TCACCACGCCTGGCTAATTTTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGATCAGGCTGGTCTCTAACTCCTGACCTCGTGATCCGCCTGTCTTGGCCTCACAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCTGGCCTAAAAGTGGTTTGTTTCTATACACTTCATTTATAATTTTTTAGATTTTGTCATACGCAGTATACAAGAAGGTATTTCATGTAGATGCTGTGACTTATATAAAGGAAATGAAACGTCCATGGTTTTAAAACAATTTGACAATTATTTATTTATTTTTGAGACAGAGTTTCACTCTTCTCGCCCAGGCTGGAGTGTAATGGCAAGATCACGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCTTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_5063:HG3_PB_pbsv_6470:HG3_Ill_MetaSV_4429:HG2_PB_PB10Xdip_25208:HG3_Ill_GATKHCSBGrefine_4561:HG2_PB_pbsv_6649:HG2_PB_SVrefine2Falcon1plusDovetail_10102:HG2_Ill_GATKHCSBGrefine_4628:HG2_PB_HySA_12441:HG2_PB_SVrefine2PB10Xhap12_4869:HG3_Ill_Spiral_7336:HG2_Ill_Spiral_481:HG2_PB_SVrefine2PBcRplusDovetail_9377:HG4_PB_SVrefine2Falcon1Dovetail_4026:HG2_10X_SVrefine210Xhap12_4795:HG3_PB_SVrefine2Falcon1Dovetail_4108;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4628:HG2_PB_SVrefine2Falcon1plusDovetail_10102:HG3_Ill_GATKHCSBGrefine_4561:HG3_Ill_MetaSV_4429;NumExactMatchSVs=4;ClusterMaxShiftDist=0.245681;ClusterMaxSizeDiff=0.245681;ClusterMaxEditDist=0.277778;PBcalls=9;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=439;DistBack=-136;DistForward=0;DistMin=-136;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=252;REFWIDENED=6:24649096-24649347;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4629.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:29:3:0:29:./.:0:0:0:0:0/1:27:9:0/1:11:31:.:.:.
chr6	24683987	HG3_Ill_GATKHCSBGrefine_4562	T	TTCTAATTAGCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTAATGTGAAAGGTCTTTCATCCCCAACCCTCTGAATGGCTAAAGGCAGGAAGCCTGAGCCCATGAACACAGATTTTTTTTTTTTCCCTAAGACTGAAAGCTGAGACCCGGAGAGGTAGGGGCTCACAGGGGACAGAGAGACTGCTGGTGCAAGGGAGGAGCTGGCCTTTGGGGGTCAGGGCAGTCCGGGAGCTCCAGGAGACAGGGCCCCTGCTCTTGTGTTTGCAGTTGTACTGTGTCCACCTGGCTTGGGGGCTGGCTCCTGGAGCAGCGGCTCAGTGAATAAACAAATGAGTGCGTGTGTGCCAAATCTGGGTTCATGTCTGGTGGTCCCCGTGAGGGAATGCAGAGGCAGGAGGACCTGGTGGGGTCTCAGGAGCTGCCGTGCTGGGGGTTCCTGCCCCACCTCTGGGCTGAAGCTCCCAGAAGGCGAGGGACCGGCTCCTCCAGGGAGCAACTGTACAGGTCAAGGAGTCTGTTCCCAGCCCCTTCCATGGCTCCTCCCAGTAGGGGCTACTTGGGGAATTTCAGGTGTGGTGGCAGCCAGAGGGAAGGCGTTTCCGGGCCTTGAGAGGAGAGCTGTTCTCCAGAGTGGGACTAGGTCTGCTAATACAGATGCAGCTCTTCCTGCAGGAGCTTCCTGGCCTCTCTCGATGATGTAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10103:HG3_PB_pbsv_6471:HG2_PB_pbsv_6650:HG2_PB_HySA_12442:HG2_PB_assemblyticsPBcR_21957:HG2_PB_PB10Xdip_25209:HG2_PB_SVrefine2PB10Xhap12_4870:HG4_PB_assemblyticsfalcon_22151:HG3_PB_assemblyticsfalcon_22616:HG3_Ill_MetaSV_4430:HG2_Ill_MetaSV_4256:HG2_PB_SVrefine2PBcRplusDovetail_9378:HG3_Ill_SVrefine2DISCOVARDovetail_5064:HG3_Ill_GATKHCSBGrefine_4562:HG2_Ill_GATKHCSBGrefine_4629:HG3_PB_SVrefine2Falcon1Dovetail_4109;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4629:HG3_Ill_GATKHCSBGrefine_4562:HG3_Ill_SVrefine2DISCOVARDovetail_5064;NumExactMatchSVs=3;ClusterMaxShiftDist=0.126113;ClusterMaxSizeDiff=0.124629;ClusterMaxEditDist=0.188976;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=700;DistBack=34776;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:24683988-24684003;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4630.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:42:0|1:20:0:0:25:./.:0:0:0:0:0/1:22:9:0/1:11:51:.:811:.
chr6	26043263	HG2_PB_PB10Xdip_25217	C	CGTGATCCGCCCGCCTCGGCCTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGACCGGCTAAATTTTTTTTTTTAATGAGTCATGCTTTTTTTTAGGGCGTGGGTGCATATCTCATTCTGTCGCTCAGGCTGTGGCGGCGCGATCTTGGCTTGCTGCAACCTCTGCCTCCCGGGCTCAAGTAATCCTCCCACCTCAGCCTCTATAGTAGCTGGAACTATAGGCATATGCCACCACGCCCTGCTAATTTTTTGTAGAGACTGGATTTCGCCATGTTGCTCAGGCTGGTCTCGAATTGTGAGCTCAAGTGATCTGCCTGACTAGGTCTCCCAAAGTGCTGGGATTACAGGCATGACACACCTCACCTGGCCCAAAAGTTCATTTTGAAAATGCTTATATTACCAGGTCTCACTTCTCCGGAGATAGATCCTAAATATCAGCTTCTTAAACTGCAGCCTCAATTCCTTAGTAATGTTTTTGGGGGATGTGGTAGTTTTATAATTAAAAAAAGAATGTAGATTTTTAAGCCAAGCGTCACTTTCACAACGGCAGTTTGCATATACAGTACTAGGATGGGAAGTGCTTCACTTACAGTTGTTCACTGACATTTTGTGTGGCATCCAGATTTTTTTTTATTTTTTATTTTTGAGACAGGGTCTGTCCTCACCCAGACTGGAGTGCAGTTGTGCCGTCACAGCTTACTGCAACCTCCACCTTCCAGGCTCAAATGATCCTCCCACTTCAGCCTCCCCAGTACTTGGGACTACAGAAATGTGCCACCAGGCCTGGTTAATTTTTTAAATTTTTGGTGGAGACAAAAGGTCTCACTAAGTTGCCCAGACTGGTCTTGAGCTCCTGGGCTCAAGTGATCCTCCCACCTTGGCCTCCCAAAATGCTGGTATTACAGGCGTGAGCTGCACCACACCCGGCCCAGAACCTCTTTTAAAAGATTCTTAAAAATTAAATCTGGGCCGGGCGCGGTGACTCATTCCTATAATCCCAGGACTTTGGGAGGCCAAGGCGGGAGGATCATTTGAGCCCAGGAGTTCGCTTGACCAGCCTGGGCAACAAAGTAAGACCCTTTGCCTCCACAAAAAATTAAAAAATTAACTGGGTATGGTGGCGCATTTCTCTAGTCCCAGCCACTCAAGGGGCTGAAGTAAGAGGATCGCTTGAGCTGGGGAAGTCGAGGTTGCAGTGAGCTATGATGGCGCCTGGCCGACAGAGAAAGGCCCTTTCTCAAAACAAAAACAAGAACTGTTTGAGAAACTTTATTTCTTCATCCAAAGACACTGCTGTATGTCACCTACATATAATGCCCATAAATTCGCTGAAAATACTCCCCTCCGATTCCCCCACCCCCTCCTGCTTACTGTGCAGTCAACAAGTGTCTTTTCTTCTTGCATTTCTTCCCCCAGCCCCAGCCCCAGAATTGGCCCATTGAGTCCTCCTCCTCAACTAGTGCTCTTCCTGCCTTTTTTTTTTTTTTTTTTTTTTAGCTATATTGTTTTTGGCGTCCTGGACTTCTCGAAAAAGATTTCCCTCTCCAAGTGGGGCCCTCCTAGTAAGCTTTGCAGTGGCGCCAGATGGGGAAGGGCACAAAATCCAAACCCTTTTGTATCTCGCAGAGCTGGAAATCAGAACGTTAAGTGGCTTAGGAAATGGGAATCTGGATTTCTGGGATGCATGAAATATGTAAACTGCATAGCTGTTGTCATTGATAAACAATTATAACTCAAAACTACTGCGATTTCATTTTGTGGAGCGGGAAATATTCCGTATAAAGGCGCCCGGGAAATCAGACTTCGCTTATTGTTTCCTCAATACTTGAAGTAAGAATTTACAGCATAGGCAAGCTGCAGGAGCAAATATCCCTACATGCCCTTTTGTCGCTTAGACTTTTCTGCTCCCCTCCCCCGCATCTCACAAGAAGTTAACGGCTAATGACCCCCACAGGAACACTATACCCTGAATTCCATTACCTGCTTCATTATCCAGAAAGGAAAGTTTCCTGTACTAGACCAGGGAGGGAGTAGTGACCTTATCAAAGGAATTATACATAGTACCCGAAGGCTTACCCAGGGGGAACAAAGAAGTTTGCTAAGACAGATGAGAAAGAGCGCCATCACGACCGTCTATCATTTGTATTTTAGTAGAGACGGGCTTTCGCCATGTTGGCCGGGCTAGTCTCGAACTCCCGACCTCAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4113:HG2_PB_pbsv_6659:HG4_PB_HySA_9965:HG4_PB_pbsv_6656:HG3_PB_pbsv_6480:HG2_PB_PB10Xdip_25218:HG2_PB_PB10Xdip_25217:HG2_PB_assemblyticsfalcon_22738:HG2_PB_assemblyticsPBcR_21966:HG4_PB_assemblyticsfalcon_22161:HG3_PB_assemblyticsfalcon_22624:HG4_Ill_SVrefine2DISCOVARDovetail_4953:HG2_PB_SVrefine2Falcon1plusDovetail_10106:HG2_PB_SVrefine2PBcRplusDovetail_9381:HG2_PB_SVrefine2PB10Xhap12_4875:HG2_Ill_SVrefine2DISCOVARplusDovetail_11002:HG2_10X_SVrefine210Xhap12_4798:HG2_PB_SVrefine2Falcon2Bionano_3340:HG4_PB_SVrefine2PBcRDovetail_3330;NumClusterSVs=19;ExactMatchIDs=HG2_PB_PB10Xdip_25217:HG2_PB_PB10Xdip_25218;NumExactMatchSVs=2;ClusterMaxShiftDist=0.145413;ClusterMaxSizeDiff=0.145413;ClusterMaxEditDist=0.205495;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=2208;DistBack=11882;DistForward=56;DistMin=56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=96;REFWIDENED=6:26043199-26043294;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.9995;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4631.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:80:1/1:1:18:0:21:./.:0:0:0:0:1/1:0:32:1/1:14:322:.:2112:.
chr6	26514427	HG3_PB_SVrefine2PBcRDovetail_3079	T	TTATATATATATACACACACATATATAATATATGTGCACATATATATATTATATATATATTATATATATATATATTATATATATATTATATATATATAATA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25223:HG4_PB_pbsv_6658:HG4_PB_assemblyticsfalcon_22163:HG2_PB_assemblyticsfalcon_22743:HG2_PB_SVrefine2Falcon1plusDovetail_10108:HG2_PB_assemblyticsPBcR_21972:HG2_PB_pbsv_6661:HG3_PB_pbsv_6482:HG2_PB_HySA_12455:HG4_Ill_manta_1660:HG4_Ill_GATKHC_11231:HG4_Ill_GATKHCSBGrefine_4695:HG4_Ill_250bpfermikitraw_9409:HG4_Ill_150bpfermikitraw_8993:HG3_PB_SVrefine2PBcRDovetail_3079:HG3_Ill_manta_1575:HG3_Ill_Spiral_7349:HG3_Ill_SVrefine2DISCOVARDovetail_5071:HG3_Ill_Krunchall_9331:HG3_Ill_GATKHC_11156:HG3_Ill_GATKHCSBGrefine_4572:HG3_Ill_250bpfermikitraw_9055:HG3_Ill_150bpfermikitraw_8831:HG2_PB_SVrefine2PBcRplusDovetail_9383:HG2_PB_SVrefine2PB10Xhap12_4879:HG2_PB_SVrefine2Falcon2Bionano_3342:HG2_Ill_manta_1905:HG2_Ill_SVrefine2DISCOVARplusDovetail_11006:HG2_Ill_Krunchall_9562:HG2_Ill_GATKHC_11172:HG2_Ill_GATKHCSBGrefine_4638:HG2_Ill_250bpfermikitraw_9375:HG2_Ill_150bpfermikitraw_8776:HG2_10X_SVrefine210Xhap12_4801:HG2_PB_PB10Xdip_25224;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4801:HG2_Ill_150bpfermikitraw_8776:HG2_Ill_250bpfermikitraw_9375:HG2_Ill_GATKHCSBGrefine_4638:HG2_Ill_GATKHC_11172:HG2_Ill_Krunchall_9562:HG2_Ill_SVrefine2DISCOVARplusDovetail_11006:HG2_Ill_manta_1905:HG2_PB_SVrefine2Falcon2Bionano_3342:HG2_PB_SVrefine2PB10Xhap12_4879:HG2_PB_SVrefine2PBcRplusDovetail_9383:HG3_Ill_150bpfermikitraw_8831:HG3_Ill_250bpfermikitraw_9055:HG3_Ill_GATKHCSBGrefine_4572:HG3_Ill_GATKHC_11156:HG3_Ill_Krunchall_9331:HG3_Ill_SVrefine2DISCOVARDovetail_5071:HG3_Ill_Spiral_7349:HG3_Ill_manta_1575:HG3_PB_SVrefine2PBcRDovetail_3079:HG4_Ill_150bpfermikitraw_8993:HG4_Ill_250bpfermikitraw_9409:HG4_Ill_GATKHCSBGrefine_4695:HG4_Ill_GATKHC_11231:HG4_Ill_manta_1660;NumExactMatchSVs=25;ClusterMaxShiftDist=0.124402;ClusterMaxSizeDiff=0.114833;ClusterMaxEditDist=0.296651;PBcalls=14;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=100;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=22;REFWIDENED=6:26514418-26514439;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4632.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:./.:0:0:0:0:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr6	28143962	HG2_PB_SVrefine2PBcRplusDovetail_9391	T	TAGGATCAATTAGTTTTTTGTCATGTAACCAACAACCTCTCAGATCTCAGTGGCTTTCAATAACAAAGGTTTATTCTTATTGCACATCAGTTATGGGTCAGTTGCAGCTGTGCAATACATTCTCTCTATTCTAGGACCCAGGCTGGAGGAGCAGTCCTACCTTGAATGTGCTGCTTTTACAGCAATAGAAAAAACAGTTGTAGGACGATGTGATGGATTTAAATTAGCTACTCTGGAGGAGCATATGTCACTTACACTTCATTAGCTAAAACAAGTCAAATTACCAAGCCTAGTATCTGTGGGGTGGGGAAAATAATCCTTACAAAGAAGTCAGTGTGTAATAACAATACATAATCTATTATTGAGATAGCATATCTACCCTGATAGCCAATATTTATGGTATGCTTTCTATACCAGGGCTTTTCCTGAATGCCTATATATATTTTTTTTCTCAATGAACAACAATGCTATGAGACAGATACTTCTGTATTCCCATTTTACAGCTGAAGAAGAACAGAGACATTGAATAACTTGTCCAAGATCATGCAGTTAGGCAATGGTAGAGCCAGGAATTGAAACCAGAAGTCTGACTTCACAATCTTCTCTTACCCACAGTGCTGTATTATGAGAGTTTTAATCTGAAGGTTTATGTCTATGTACCATGTTGGACTTTAAAGAGTCATGAAGTGTGCTAGTAAAAACTCTAAAAGTGAGATTCAGGAGCCCTTGGTCTCATCCTGCCTTTACCTCTGAGTAACCATATTACCTAGGCTCATGCCCCATACCTGGGCCTCAATTTCTGTATCCTTAAAAATAGGGTAAACAGACCAGATATTCTCTGATACCCGTTCAGCTTTGAATTTCTTATCTTTTCTCCAAGTAGATAGTAAAATATTTTGTTGATGTTGATATGATGACCTCTTTCATCTTCTGCTTCCTATGTTATTATCTTCATAGTAGATCTTGTATCAGTATTGAATCTCCCCAATCCTCTTCCTTCTATTTTACTTCGCCTGTTTTACTTTAATGATACTACCACTACTGCTGCTGCTACTACTACTACTACTGTCTACCATTTATTGAGACCTACTGTTTCAGAACAGGAAAATAAACCCAAAGAAAGCTGAAGGAAGAAAGTACTAAAGATAAGAACAGAAATCAATGAAAAAGCAAACATATATCCTTACTTAGAGCCTTCATATATAAAGAGTGTGTTTTAGGTATGTTCTCTCTGTAGGCTACTCATATATGTTACATTAGAATTCCCCTTTGTGTCTTCAGGAAAAAGGTGCTAATTGCATAATCAACTTGTTCTTTCAGATGGTGACTCCTGGCCTTAAACAGGAGTCTGTTTCAAAGAAAGACTTTTCCAGAAGAAGTCCAACAGAGTGATGTCCAGGGGACTAAATAGAAACATTTATCAGGGACCCAACACTGAAAAGTTCATGGGCTTCTGAATAGTTTTCCCAAGTGAGGGGAGATCCCCTTTGAAGAAGCACAACAGACATTGCCTAAAGCTAAGGAGAGTATCACTGATAAAGGAACCTGAGACATCTGGGAGAATTTGCTCTGAAATTCAGTCCTGCCAATGCTCTGAGAGTGGGAAACCCTCCTTTCAGTTTGCACATGATTTTCAACTTCAGCAACTGTAATAAAACAAGCAGGCTCTCAATGTAAAGTTAGTGGAAAAGTCATTTCTCTGAAAATATCACTCCCTATTTAAAAAAGCCTTAACACACCAGCAGCCCTGACTTAAACACCAGCATGTCCAAACTGGAGGAAAGCCCTATGTGTATCCTCAACATGGAAAGACCTTCAGTGTAAACCCAAGTCCCATGAAACAACAGAGAAGCCATCCTGGAGAGGACTTGCATGAGAGTAAAGAATGTGGCAAAATCTTCAGACACTGGATCTTGTCAGACATCAGAGAGCTCTTGTGGATATCTTCAGTGTGGAAAGCCTTCTGTGCGAGCTCAGTATTATTGAACATAAGTAAATTCATTTTGGACAAGAGCCTTATCTATATTCGTGAGTAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3673:HG4_PB_SVrefine2Falcon1Dovetail_4034:HG4_PB_SVrefine2PBcRDovetail_3338:HG4_Ill_SVrefine2DISCOVARDovetail_4966:HG4_Ill_Cortex_3118:HG2_PB_SVrefine2PBcRplusDovetail_9391:HG2_Ill_Cortex_7557:HG2_10X_SVrefine210Xhap12_4808:HG3_PB_SVrefine2Falcon1Dovetail_4121:HG2_PB_HySA_12475:HG4_PB_HySA_9988;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4808:HG2_Ill_Cortex_7557:HG2_PB_SVrefine2PBcRplusDovetail_9391:HG4_Ill_Cortex_3118:HG4_Ill_SVrefine2DISCOVARDovetail_4966:HG4_PB_SVrefine2PBcRDovetail_3338;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00978953;ClusterMaxSizeDiff=0.00978953;ClusterMaxEditDist=0.0210012;PBcalls=6;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=2035;DistBack=6428;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=6:28143963-28143964;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4634.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:52:0|1:31:1:1:34:./.:0:0:0:0:0/1:25:26:0/1:74:123:.:2010:.
chr6	33934895	HG2_Ill_250bpfermikitraw_9465	C	CCCTTCTGCCATGATTGTAAGTTTCCTGAGGTGCCTTCTGCCATGATTGTAAGTTTCCTGAGGTG	20	PASS	ClusterIDs=HG4_PB_HySA_9999:HG4_PB_assemblyticsfalcon_22283:HG3_PB_assemblyticsfalcon_22753:HG2_PB_HySA_12496:HG4_PB_pbsv_6783:HG2_PB_SVrefine2PB10Xhap12_4941:HG3_PB_pbsv_6593:HG2_PB_PB10Xdip_25565:HG2_PB_PB10Xdip_25564:HG3_PB_HySA_10407:HG4_Ill_svaba_8823:HG2_PB_pbsv_6771:HG4_Ill_SVrefine2DISCOVARDovetail_5013:HG4_Ill_Krunchall_10061:HG4_Ill_GATKHCSBGrefine_4790:HG4_Ill_250bpfermikitraw_9501:HG4_Ill_150bpfermikitraw_9092:HG3_Ill_svaba_8799:HG3_Ill_Spiral_7421:HG3_Ill_SVrefine2DISCOVARDovetail_5120:HG3_Ill_Krunchall_9485:HG3_Ill_GATKHCSBGrefine_4667:HG3_Ill_250bpfermikitraw_9147:HG2_Ill_svaba_8728:HG2_Ill_SVrefine2DISCOVARplusDovetail_11053:HG2_Ill_Krunchall_9716:HG2_Ill_GATKHCSBGrefine_4723:HG2_Ill_250bpfermikitraw_9465:HG2_Ill_150bpfermikitraw_8872:HG2_10X_SVrefine210Xhap12_4858;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4858:HG2_Ill_150bpfermikitraw_8872:HG2_Ill_250bpfermikitraw_9465:HG2_Ill_GATKHCSBGrefine_4723:HG2_Ill_Krunchall_9716:HG2_Ill_SVrefine2DISCOVARplusDovetail_11053:HG2_Ill_svaba_8728:HG3_Ill_250bpfermikitraw_9147:HG3_Ill_GATKHCSBGrefine_4667:HG3_Ill_Krunchall_9485:HG3_Ill_SVrefine2DISCOVARDovetail_5120:HG3_Ill_Spiral_7421:HG3_Ill_svaba_8799:HG4_Ill_150bpfermikitraw_9092:HG4_Ill_250bpfermikitraw_9501:HG4_Ill_GATKHCSBGrefine_4790:HG4_Ill_Krunchall_10061:HG4_Ill_SVrefine2DISCOVARDovetail_5013:HG4_Ill_svaba_8823;NumExactMatchSVs=19;ClusterMaxShiftDist=0.1875;ClusterMaxSizeDiff=0.1875;ClusterMaxEditDist=0.306452;PBcalls=11;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=64;DistBack=-1;DistForward=1608;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=30;REFWIDENED=6:33934896-33934925;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:31:./.:6:15:7:7:./.:0:0:0:0:0/1:28:27:./.:.:.:.:.:.
chr6	34654673	HG2_PB_SVrefine2PBcRplusDovetail_9439	C	CAGTGAGCCGAGATCATTCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCCAAAAAAAAAAAAAAAAAAGAAAGGCAAGAATTCTCTGTATGCCCAG	20	PASS	ClusterIDs=HG4_PB_pbsv_6787:HG3_PB_pbsv_6596:HG2_PB_pbsv_6776:HG4_PB_assemblyticsfalcon_22290:HG2_PB_assemblyticsPBcR_22097:HG3_PB_assemblyticsfalcon_22761:HG2_PB_assemblyticsfalcon_22871:HG2_PB_PB10Xdip_25571:HG2_PB_PB10Xdip_25572:HG4_Ill_MetaSV_4475:HG4_Ill_GATKHCSBGrefine_4792:HG2_PB_SVrefine2PBcRplusDovetail_9439:HG2_PB_SVrefine2PB10Xhap12_4945:HG2_PB_SVrefine2Falcon2Bionano_3389:HG2_Ill_SVrefine2DISCOVARplusDovetail_11057:HG2_Ill_GATKHCSBGrefine_4726:HG4_PB_SVrefine2PBcRDovetail_3384:HG3_PB_SVrefine2PBcRDovetail_3097:HG3_Ill_MetaSV_4481:HG3_Ill_GATKHCSBGrefine_4670:HG2_Ill_MetaSV_4303:HG2_10X_SVrefine210Xhap12_4859:HG4_PB_HySA_10003:HG2_PB_HySA_12498;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4726:HG2_Ill_SVrefine2DISCOVARplusDovetail_11057:HG2_PB_SVrefine2Falcon2Bionano_3389:HG2_PB_SVrefine2PB10Xhap12_4945:HG2_PB_SVrefine2PBcRplusDovetail_9439:HG4_Ill_GATKHCSBGrefine_4792:HG4_Ill_MetaSV_4475;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0904977;ClusterMaxSizeDiff=0.0904977;ClusterMaxEditDist=0.189189;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=106;DistBack=24769;DistForward=22485;DistMin=22485;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=6:34654674-34654675;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9815;PctRecOverlap=0.9817;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:2:22:1:29:./.:0:0:0:0:1/1:0:22:./.:.:.:.:.:.
chr6	35682057	HG2_PB_PB10Xdip_25582	C	CGTCTCTCTAAAAATACAAAAATTAGCCGGGCATGATGGTGCCTGCCTCCTGGGTTCAAGCAATTCTGCCTCTGAGTAGCTGGGATTACAGGCGCCTGCCACCATGCCCAGCAAATTTTCGTATTTTTAGTAGAGACAGGGTTTCAGGGTAATCCTGAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAAGCCGGGAGGCGGAAGTTGCAGTGAGCCGAGGTCGCGCCACTGCACTCCCGCCTGGGCGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAACAGAAAGAAAGAAAAGAAAAATCTTACGCTTGGAGATTCACACAAATTATATTTAAAAAGCAAGATGGGCTGGGCAAGGTGGCTCATGCCTGTAATTCCAATGATTCAGGAGGCTGAGGCGGGAGGATTACTTGAGCCCAAAATGTCAACGCTGCAGTGAACTGTGATCATGCCACTACCCTCCCACCTGGGCAACAAAGTGAGACTCAGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAGGCCAGGCACGGTGGCTAACGTTTTTCTAATCCCAGCACTTTGGGAGATCAAGGTGAGCAGATCACCTGAGGTCAGGGGATTGAGACTAGCCTGGCCAACATGGTGAAACCCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4088:HG4_PB_HySA_10011:HG2_PB_pbsv_6781:HG4_PB_pbsv_6793:HG4_Ill_MetaSV_4478:HG2_PB_PB10Xdip_25583:HG2_PB_PB10Xdip_25582:HG3_PB_HySA_10425:HG3_Ill_MetaSV_4483:HG2_Ill_MetaSV_4306:HG2_PB_HySA_12503:HG3_PB_pbsv_6601:HG2_PB_SVrefine2PBcRplusDovetail_9442:HG2_PB_SVrefine2PB10Xhap12_4950:HG3_PB_SVrefine2PBcRDovetail_3102:HG2_10X_SVrefine210Xhap12_4865:HG4_PB_SVrefine2PBcRDovetail_3388:HG2_PB_SVrefine2Falcon2Bionano_3394;NumClusterSVs=18;ExactMatchIDs=HG2_PB_PB10Xdip_25582:HG2_PB_PB10Xdip_25583;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0703902;ClusterMaxSizeDiff=0.06886;ClusterMaxEditDist=0.193839;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=642;DistBack=-39;DistForward=47468;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=125;REFWIDENED=6:35681972-35682096;PctSeqSimilarity=0.99;PctSizeSimilarity=0.9832;PctRecOverlap=0.9847;SizeDiff=-11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4637.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:0:25:1:18:./.:0:0:0:0:./.:2:17:./.:5:73:.:.:.
chr6	36396790	HG3_PB_SVrefine2PBcRDovetail_3104	T	TCCCAGTACTTTGGGAGGCTGAAGTGGGCTGATCACTTGAGCTCAGGAGTTTGAGAACAGCCTGGGCAACATGGTGAAATCTGGTCTCTACAAAAAAATACACAAATTAGCCTAGTGGTTGCGCACACCTGTAATCCCAGCTACTCAGGAAGCTGAGGTGGGAGAATCACTTGAGTCCAGAAAATTGAGGCTGCAATGAGCCATGTTTACACCACTGCATTCCAGCCTGGGGTACAAAGTGAGAGTGAGACCCTGTCTCAAAAAAAAAAAAAAGAAAAAAAAGAAAAAGAAAAAATTTATGCATATATATGTATACATATGCCAGAAAAACACTATGCTCTTTTATGTAACCGTTCGTATAACTGGATAATTACCAGGCCGGACGCAGTGGCTCACCCTTGTAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4090:HG3_PB_HySA_10431:HG4_PB_pbsv_6794:HG2_PB_HySA_12508:HG3_PB_pbsv_6604:HG4_PB_HySA_10014:HG2_PB_pbsv_6784:HG2_PB_PB10Xdip_25587:HG2_PB_PB10Xdip_25586:HG2_Ill_breakscan11_3680:HG4_Ill_MetaSV_4479:HG4_Ill_GATKHCSBGrefine_4793:HG3_Ill_MetaSV_4484:HG3_Ill_GATKHCSBGrefine_4674:HG2_Ill_MetaSV_4307:HG2_Ill_GATKHCSBGrefine_4736:HG4_PB_SVrefine2PBcRDovetail_3390:HG4_Ill_SVrefine2DISCOVARDovetail_5028:HG3_PB_SVrefine2PBcRDovetail_3104:HG3_Ill_SVrefine2DISCOVARDovetail_5129:HG2_PB_SVrefine2PBcRplusDovetail_9445:HG2_PB_SVrefine2PB10Xhap12_4953:HG2_PB_SVrefine2Falcon2Bionano_3395:HG2_PB_SVrefine2Falcon1plusDovetail_10157:HG2_Ill_SVrefine2DISCOVARplusDovetail_11066:HG2_10X_SVrefine210Xhap12_4867;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4867:HG2_Ill_SVrefine2DISCOVARplusDovetail_11066:HG2_PB_SVrefine2Falcon1plusDovetail_10157:HG2_PB_SVrefine2Falcon2Bionano_3395:HG2_PB_SVrefine2PB10Xhap12_4953:HG2_PB_SVrefine2PBcRplusDovetail_9445:HG3_Ill_SVrefine2DISCOVARDovetail_5129:HG3_PB_SVrefine2PBcRDovetail_3104:HG4_Ill_SVrefine2DISCOVARDovetail_5028:HG4_PB_SVrefine2PBcRDovetail_3390;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0513447;ClusterMaxSizeDiff=0.0488998;ClusterMaxEditDist=0.271726;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=404;DistBack=2657;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=272;REFWIDENED=6:36396791-36397062;PctSeqSimilarity=0.9533;PctSizeSimilarity=0.9876;PctRecOverlap=0.4;SizeDiff=5;StartDistance=-240;EndDistance=-240;GTMatch=0;TruScore=78;MatchId=4639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:./.:0:0:0:0:./.:0:0:0:0:./.:0:4:1/1:2:41:.:.:.
chr6	36916449	HG3_Ill_svaba_8824	C	CTCCCTCCTTCCCTCCTTCCTCCCTCCCTCCTTCCCTCCTTCCTCCCTCCCTCCTTCCCTCCTTCCTCCCTCCCTCCT	20	PASS	ClusterIDs=HG3_PB_pbsv_6605:HG4_Ill_svaba_8844:HG2_PB_assemblyticsfalcon_22887:HG3_Ill_svaba_8824:HG2_Ill_svaba_8752:HG2_PB_pbsv_6786;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_svaba_8752:HG3_Ill_svaba_8824:HG4_Ill_svaba_8844;NumExactMatchSVs=3;ClusterMaxShiftDist=0.122449;ClusterMaxSizeDiff=0.122449;ClusterMaxEditDist=0.236111;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=77;DistBack=-1;DistForward=8;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=73;REFWIDENED=6:36916396-36916468;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:1|0:5:20:18:5:./.:0:0:0:0:1/1:0:19:./.:.:.:.:.:.
chr6	36968540	HG3_PB_SVrefine2PBcRDovetail_3105	C	CATAACTCCCTTGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_6606:HG2_PB_PB10Xdip_25590:HG2_PB_pbsv_6787:HG4_PB_pbsv_6796:HG2_Ill_breakscan11_3681:HG2_PB_SVrefine2Falcon1plusDovetail_10158:HG2_PB_assemblyticsfalcon_22889:HG2_PB_SVrefine2Falcon2Bionano_3396:HG2_10X_SVrefine210Xhap12_4870:HG4_PB_SVrefine2PBcRDovetail_3392:HG3_PB_SVrefine2PBcRDovetail_3105:HG3_Ill_MetaSV_4485:HG3_Ill_GATKHCSBGrefine_4675:HG2_Ill_GATKHCSBGrefine_4738:HG4_PB_SVrefine2Falcon1Dovetail_4092:HG2_PB_SVrefine2PBcRplusDovetail_9446:HG2_PB_assemblyticsPBcR_22115:HG2_PB_SVrefine2PB10Xhap12_4955:HG4_Ill_MetaSV_4480:HG4_Ill_GATKHCSBGrefine_4795:HG2_Ill_MetaSV_4308:HG3_PB_assemblyticsfalcon_22781:HG2_PB_HySA_12513:HG3_PB_HySA_10435:HG4_PB_HySA_10021;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4738:HG3_Ill_GATKHCSBGrefine_4675:HG3_Ill_MetaSV_4485:HG3_PB_SVrefine2PBcRDovetail_3105:HG4_PB_SVrefine2PBcRDovetail_3392;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0828402;ClusterMaxSizeDiff=0.0712166;ClusterMaxEditDist=0.213018;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=328;DistBack=2155;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=6:36968541-36968553;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4642.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:1/1:0:25:0:20:./.:0:0:0:0:1/1:0:22:1/1:2:80:.:.:.
chr6	36980774	HG2_Ill_GATKHCSBGrefine_4739	A	ATACATATATATACACGTATATATACGTATATATATACGTGTATATATACGTACATATACGTGTATATATACGTACATGTACGTGTATATATACGTACATGTACGTGTATATACGTACATGTACGTGTATATACGTACATGTACGTGTATATACACGTACATG	20	PASS	ClusterIDs=HG2_PB_pbsv_6788:HG3_Ill_Spiral_7441:HG2_PB_HySA_12514:HG3_Ill_GATKHCSBGrefine_4676:HG2_Ill_GATKHCSBGrefine_4739:HG3_Ill_manta_1603:HG2_10X_SVrefine210Xhap12_4871:HG3_Ill_MetaSV_4486:HG3_PB_pbsv_6607:HG2_PB_SVrefine2Falcon1plusDovetail_10159;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4739:HG3_Ill_GATKHCSBGrefine_4676:HG3_Ill_Spiral_7441;NumExactMatchSVs=3;ClusterMaxShiftDist=0.162162;ClusterMaxSizeDiff=0.162162;ClusterMaxEditDist=0.270769;PBcalls=4;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=162;DistBack=-79;DistForward=9465;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=41;REFWIDENED=6:36980758-36980798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4643.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:20:0|1:31:5:2:15:./.:0:0:0:0:0/1:26:19:./.:.:.:.:.:.
chr6	37696101	HG3_Ill_250bpfermikitraw_9177	T	TTGGCGCCATTTGTTCCTAAAAAGGCAGATTCATCTGCCATCTAAGCAGGTGGCCAGGAGCAGCCCTGACCCTTTAGGTTTCCCAGGCATGAGTCCTAAACC	20	PASS	ClusterIDs=HG3_PB_pbsv_6611:HG2_PB_pbsv_6792:HG3_PB_SVrefine2PBcRDovetail_3108:HG2_PB_assemblyticsfalcon_22897:HG2_PB_assemblyticsPBcR_22121:HG3_Ill_svaba_8830:HG3_Ill_manta_1605:HG3_Ill_Spiral_7444:HG3_Ill_MetaSV_4487:HG3_Ill_GATKHCSBGrefine_4678:HG3_Ill_Cortex_3158:HG3_Ill_250bpfermikitraw_9177:HG2_PB_SVrefine2Falcon2Bionano_3399:HG2_PB_SVrefine2Falcon1plusDovetail_10162:HG2_Ill_svaba_8757:HG2_Ill_manta_1938:HG2_Ill_SpiralSDKrefine_14559:HG2_Ill_SVrefine2DISCOVARplusDovetail_11076:HG2_Ill_MetaSV_4309:HG2_Ill_GATKHCSBGrefine_4741:HG2_Ill_Cortex_7628:HG2_Ill_250bpfermikitraw_9496:HG2_10X_SVrefine210Xhap12_4874:HG2_PB_SVrefine2PBcRplusDovetail_9449:HG2_PB_PB10Xdip_25598:HG2_PB_PB10Xdip_25597:HG2_PB_HySA_12522:HG2_PB_SVrefine2PB10Xhap12_4958;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4874:HG2_Ill_250bpfermikitraw_9496:HG2_Ill_Cortex_7628:HG2_Ill_GATKHCSBGrefine_4741:HG2_Ill_MetaSV_4309:HG2_Ill_SVrefine2DISCOVARplusDovetail_11076:HG2_Ill_SpiralSDKrefine_14559:HG2_Ill_manta_1938:HG2_Ill_svaba_8757:HG2_PB_SVrefine2Falcon1plusDovetail_10162:HG2_PB_SVrefine2Falcon2Bionano_3399:HG3_Ill_250bpfermikitraw_9177:HG3_Ill_Cortex_3158:HG3_Ill_GATKHCSBGrefine_4678:HG3_Ill_MetaSV_4487:HG3_Ill_Spiral_7444:HG3_Ill_manta_1605:HG3_Ill_svaba_8830;NumExactMatchSVs=18;ClusterMaxShiftDist=0.128713;ClusterMaxSizeDiff=0.128713;ClusterMaxEditDist=0.188119;PBcalls=12;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=101;DistBack=30144;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:37696102-37696101;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4644.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:46:0|1:18:1:2:40:./.:0:0:0:0:0/1:30:24:./.:.:.:.:.:.
chr6	38932063	HG2_PB_SVrefine2Falcon2Bionano_3402	C	CCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCTGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGACGGCTGGCCGGGCAGGGGGCCGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4098:HG2_10X_SVrefine210Xhap12_4878:HG4_PB_SVrefine2PBcRDovetail_3398:HG2_PB_SVrefine2Falcon1plusDovetail_10165:HG4_PB_pbsv_6807:HG2_PB_SVrefine2PB10Xhap12_4961:HG2_PB_SVrefine2PBcRplusDovetail_9452:HG2_PB_SVrefine2Falcon2Bionano_3402:HG3_PB_SVrefine2PBcRDovetail_3111;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3402:HG2_PB_SVrefine2PBcRplusDovetail_9452;NumExactMatchSVs=2;ClusterMaxShiftDist=0.15;ClusterMaxSizeDiff=0.15;ClusterMaxEditDist=0.236422;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=102;DistForward=33;DistMin=33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=164;REFWIDENED=6:38932064-38932227;PctSeqSimilarity=0.9662;PctSizeSimilarity=0.9449;PctRecOverlap=0.7913;SizeDiff=-19;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=90;MatchId=4645.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:1:19:1:16:./.:0:0:0:0:0/1:5:3:1/1:2:44:.:.:.
chr6	39813145	HG2_PB_SVrefine2PB10Xhap12_4963	A	AACCCCATCTACACACACATCACACATATACCACGTGTATACACCAGACATAGGCACACCACACACATACCACACACCACGCACACATCACATACACACCACATACACACCCCACAGGCACATATGCACTCATCACACATACACACCGCCTAAACATACCCTGCCACACATACACATATCACACACACTGCACATACTGCACATATACACCACACCACACATATACCACACACACAAACCCCATCTACACACACAGCACACACACAGCATACACATACCACATAGACCACACATACACATATACACACCACACGTGCAACCTGCACACACCCCCTACATACACAAACCACACGTACAACACACACACCACATGTACACAAACCCCATCTACACACATTCTACACATAAACACCACATATACACATACCACACACACACACCACACATACCCATATCCCCATATCCCACCCCGACAAATGCCATACACATACCACATATATACACCAAAATACACATGTCACATACACACCATACATACACATGTACACATACCACACATGCACATACACATACACCACCTACACACACACCACACATATGCACCACACATACACATACTACACACCACACCACAGCACAGCACAGATACATGTAGACACGCACCATACATATATACATACATACATACACATACACACCACCTACACACACACCACACACATACTCTGCCTATGCACACCACACACCACACACATCACACATACATACCATATCACACCACACATACACATATACACACACCATGCATGTACATATACCACCTACACACACACCAAACATACACATACCCCACTTACATACATGCTACACACATACTACACATACCCCACATACATCACATGCACACCATACGTATATACACACACCATACATGCCACACCTGAACACACACACACACACATCACACAAACACACCACATACACACCACATACACACCACATACACCACACATACACCACACATACAATACACACACCACACGCACATCCCATCTACATACACACCACATACACTACACAAACATAACACAAATATACATACCACATCACACCATACGTACACACACACCACAGACACATACCACATGCACATAAATCCTATCTATACATATACCACCTATGAACATATACCACCTACACACCAACAGATATGCCACCCACACACGTGCCACATACACACCACACATACACCACATACACACACCCCATCTACATACACACCACACACTACACAAACATACCACAAATACACATACACATACCATATCACACCACACATACACACACCTCAGACACATACCACACACATATAAACCCCATCTACACACACACACCACACTTGAACATATACCTCTTACACACCACACGTACACATATGCCACACACACACATGCCACATACACCATACATACACATACCCTATCTACACACATACTATGTGACCACACACACCCCACACACATCACACATACATACCATATCACACCACACATGCACATATACTGCCTATACACATCACACACACCTACCCCACCACACACGCCACACACATACCACACATACACACCACACATACACACACCATACCACATATACACACACCACACATATACAACCTAAACATACACACACCACACACACCACTTATACATGCATGCACACATCACATACACACCACACATACCACACACACCACACATCACATATATACACCACACCTCACATACATATACACATACACCATATGTGTATGTACACCAACTATGTGCACACACCACATATAGTCATACCCTACCTACACACACACCACACATACCACACATATACCCACCACACCAC	20	PASS	ClusterIDs=HG4_PB_HySA_10044:HG2_PB_pbsv_6803:HG2_PB_assemblyticsPBcR_22140:HG4_PB_pbsv_6810:HG2_PB_assemblyticsfalcon_22916:HG3_PB_assemblyticsfalcon_22801:HG2_PB_PB10Xdip_25628:HG2_PB_PB10Xdip_25627:HG2_Ill_breakscan11_3683:HG4_PB_SVrefine2Falcon1Dovetail_4102:HG4_PB_SVrefine2PBcRDovetail_3400:HG4_Ill_SVrefine2DISCOVARDovetail_5045:HG2_PB_SVrefine2PB10Xhap12_4963:HG2_Ill_SVrefine2DISCOVARplusDovetail_11088:HG2_PB_SVrefine2PBcRplusDovetail_9454:HG3_Ill_SVrefine2DISCOVARDovetail_5139:HG2_PB_SVrefine2Falcon2Bionano_3404:HG2_PB_SVrefine2Falcon1plusDovetail_10167:HG3_PB_SVrefine2PBcRDovetail_3113;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11088:HG2_PB_SVrefine2PB10Xhap12_4963:HG4_Ill_SVrefine2DISCOVARDovetail_5045;NumExactMatchSVs=3;ClusterMaxShiftDist=0.079398;ClusterMaxSizeDiff=0.079398;ClusterMaxEditDist=0.233885;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=1898;DistBack=48;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=6:39813146-39813173;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9953;PctRecOverlap=0.9947;SizeDiff=9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4646.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:88:1/1:0:22:0:19:./.:0:0:0:0:1/1:0:33:1/1:2:273:.:2101:.
chr6	39894489	HG3_PB_HySA_10452	G	GGAAGGGGGGAAGGGGGGAGGAGGGGAAGGAGGGGGAAGGAGGGGGAAGGAGGAAGGCGGAAAGGGGGAGGGGAAGAGGGGAGGGGCAGGGGGAGGGGGAAAAGGGGCGGGAAGGGGGGAAAAGGGGGGGGGGGGGGAAAGGGTGGGGGAAGGGGGGAAGGGGAAAGGGGTGGGGGAAGGGGGGAAGGGGGGAAGGGGAAAGGGGTGGGGGGAAGGGGGGAGGGAAAGGGTGAGGGGAAGGGGGGAAGGGGGGAAGGGGGAAAGGGGTGAGGGGGAGGAGGAGGAGGGGGAGGGGAGGGGGAGGGGGGAGGGGAGGGGAGGGAGAGGGCGGGGAGGGAGGGGAGGGGAGGGGGGGGGAGGGGGAGGGGAGGGGAGGGGAGGGGGGAGGGGAGGGGAGGGGAGGGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGGAGGGGAGGAGGGGGGAGGGGGGAGGGGAGGGGAGAGGGAGGAGGGGAGAGGAGGGGAGGGGAGGGGGGAGGGGGAGGGAGGGAAGGGGGGAGGGGGAGGGGGAGGGGAGAGGAGGGGAGGGGCGGGAGGGGAGGGAGGGAGGAGGGGAGGGGGAAGAGGAGGGGAGGGGGAGGGAGAGGGAGGGAGTGGAGGGAGGGGAGGGAGAGGGAGGGGAGTGGAGGGGAGGGGAGGGGAGGGGGAGGGAGGGAGGAGTGGGGAGGGAGGGGCGAGGGAGGAAGGTGGGAGGGGGAGGAGTGGAGGGGAGGGAGGAGGGGATGCGGGGAGGGGAGAGGAGGAGGGAGGAGAGGGGGGGAGGGGAGGGGAGGGGAGGGGGAGGGGAGGGTGGA	10	PASS	ClusterIDs=HG4_PB_pbsv_6811:HG4_PB_SVrefine2Falcon1Dovetail_4103:HG2_PB_PB10Xdip_25629:HG2_PB_pbsv_6804:HG2_PB_PB10Xdip_25630:HG3_PB_HySA_10452:HG2_PB_HySA_12541:HG2_PB_assemblyticsPBcR_22141:HG2_PB_SVrefine2PBcRplusDovetail_9455:HG2_PB_SVrefine2PB10Xhap12_4964:HG3_PB_SVrefine2PBcRDovetail_3114:HG2_PB_SVrefine2Falcon2Bionano_3405:HG3_PB_assemblyticsfalcon_22802:HG3_PB_pbsv_6621;NumClusterSVs=14;ExactMatchIDs=HG3_PB_HySA_10452;NumExactMatchSVs=1;ClusterMaxShiftDist=0.249851;ClusterMaxSizeDiff=0.249851;ClusterMaxEditDist=0.289301;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=833;DistBack=-33;DistForward=8266;DistMin=-33;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=6:39894479-39894518;PctSeqSimilarity=0.9417;PctSizeSimilarity=0.9904;PctRecOverlap=0.9904;SizeDiff=8;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=97;MatchId=4647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:0:10:0:8:./.:0:0:0:0:./.:0:6:0/1:9:21:.:914:.
chr6	40046892	HG3_Ill_MetaSV_4489	T	TAGAAAGTAGTCTGTAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_12542:HG3_PB_pbsv_6622:HG4_PB_HySA_10045:HG4_PB_pbsv_6812:HG3_Ill_manta_1607:HG2_PB_pbsv_6805:HG2_PB_SVrefine2Falcon1plusDovetail_10168:HG2_PB_assemblyticsfalcon_22917:HG3_PB_HySA_10453:HG2_Ill_breakscan11_3684:HG4_PB_SVrefine2Falcon1Dovetail_4104:HG4_Ill_MetaSV_4484:HG4_Ill_GATKHCSBGrefine_4810:HG3_PB_SVrefine2PBcRDovetail_3115:HG3_Ill_MetaSV_4489:HG3_Ill_GATKHCSBGrefine_4684:HG2_Ill_MetaSV_4312:HG2_Ill_GATKHCSBGrefine_4752:HG3_PB_assemblyticsfalcon_22803;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4752:HG2_Ill_MetaSV_4312:HG3_Ill_GATKHCSBGrefine_4684:HG3_Ill_MetaSV_4489:HG3_PB_SVrefine2PBcRDovetail_3115:HG4_Ill_GATKHCSBGrefine_4810:HG4_Ill_MetaSV_4484:HG4_PB_SVrefine2Falcon1Dovetail_4104;NumExactMatchSVs=8;ClusterMaxShiftDist=0.193038;ClusterMaxSizeDiff=0.189873;ClusterMaxEditDist=0.236967;PBcalls=11;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=316;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=6:40046893-40046909;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:51:0|1:23:1:0:29:./.:0:0:0:0:0/1:30:11:0/1:8:29:.:.:.
chr6	40459830	HG2_PB_pbsv_6808	T	TTCTGTTTCCTCACTCTATTTTGCTGTGTGACTCGTGGGTAGGTAGGCAGCTTACGCCTCTCCTGAGTGTGTTTCCCTCTCTCCATTTTTGCTGTGTTGATGTGGGTAGGTAGGCAGCTTACCCTCTCTGAGTGTGTTTCCTCACTCTATTTTTGGGCCGTGTGAACACTGTGGTAAGGATAGGCTTCAGCTTCCCTCTCTGATGTCTGTTTCCCTCATTCTATTTTGCGCGTGTGACTGTGGGTAGGTAGGCAGCTTACCTGTCTGAGTGTCTGTTTCCGTCACTCTATTTTGCTGTGTGACGTGGGTAGGTAGGCAGCTTACGCCTCTCTGGTTTTGTTTCCCTACTCTATGTTTTGCGTGTGACTGTGGGGTAGGTTAGGCAGCTTACCCTCTCTGAGTGTCTGTTTCCTCACTCTAGTTTTGCTGTGTGACTGTGGGTGGTAGGCAGCTTACCTCTCTGAGTGTGTTTCCCCTCTCTCCATTTTGCTGTGTGATGGTGGGTAAGTAGGGCAGCTTACCCTCGTCTGAGTGTCTGTTTCCCTCATTCTATTTGCCGTGTGACTGTGGTAGGTAGGCAGCTTACCTCTCTGAGTGTGTTTCCCTCATCTATTTTGCTGTGTGGGAACTGTGGGTAGGTAGGCAGCTTACCCTCTCTGAGTGTCTGTTTCCTCACCTATTTTGCTGTGTGACTGGTGGGTAGGTAGGCAGCTTACCCTCTCTGAGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3407:HG4_PB_pbsv_6816:HG2_PB_pbsv_6808:HG2_PB_SVrefine2Falcon1plusDovetail_10170;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_6808;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0376307;ClusterMaxSizeDiff=0.0292683;ClusterMaxEditDist=0.151685;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=727;DistBack=243;DistForward=31876;DistMin=243;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=6:40459533-40459830;PctSeqSimilarity=0.9603;PctSizeSimilarity=0.978;PctRecOverlap=0.37;SizeDiff=16;StartDistance=450;EndDistance=450;GTMatch=0;TruScore=76;MatchId=4649.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:30:0|1:37:2:2:17:./.:0:0:0:0:0/0:27:0:0/1:18:10:.:.:.
chr6	40622731	HG2_PB_SVrefine2Falcon2Bionano_3408	G	GGTGATGGTGAAGATGATGATGATGATGGTAATAGTGATGGTGATGATGACAGTGAAGATGACAATGGTAATGATGGTGATAGTGATGGTAAAGATGATAATGATGATGCTGGTAATAATGATAGTGATGATGATGGTGAAGATCATGATGATGTTAATAGTGATGGTGATGGTGAAGATGACAATGATGATGGTTATAGTGATGATGATGGTGATGGTGAAGAAGATGATGATGGTAATAATTATACTGATGGTGATGGTGAAGATGATGATGATGATGATGGTAATTGTGATGGTGATGATGATGGTGAAGGTAATGATGGTAATAGTGATGGTAAAGATTATAATAATGATGGTGGTAATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4108:HG4_PB_pbsv_6818:HG2_PB_pbsv_6811:HG3_PB_pbsv_6628:HG2_PB_HySA_12550:HG2_PB_PB10Xdip_25638:HG2_PB_PB10Xdip_25637:HG4_Ill_MetaSV_4486:HG4_Ill_GATKHCSBGrefine_4813:HG3_Ill_manta_1609:HG3_Ill_MetaSV_4493:HG3_Ill_GATKHCSBGrefine_4694:HG2_Ill_manta_1946:HG2_Ill_MetaSV_4313:HG2_Ill_GATKHCSBGrefine_4755:HG4_PB_HySA_10054:HG2_Ill_breakscan11_3685:HG4_PB_SVrefine2PBcRDovetail_3403:HG4_Ill_SVrefine2DISCOVARDovetail_5050:HG3_PB_SVrefine2PBcRDovetail_3120:HG3_Ill_SVrefine2DISCOVARDovetail_5146:HG2_PB_SVrefine2PBcRplusDovetail_9457:HG2_PB_SVrefine2PB10Xhap12_4968:HG2_PB_SVrefine2Falcon2Bionano_3408:HG2_PB_SVrefine2Falcon1plusDovetail_10171:HG2_Ill_SVrefine2DISCOVARplusDovetail_11091:HG2_10X_SVrefine210Xhap12_4889;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4889:HG2_Ill_SVrefine2DISCOVARplusDovetail_11091:HG2_PB_SVrefine2Falcon1plusDovetail_10171:HG2_PB_SVrefine2Falcon2Bionano_3408:HG2_PB_SVrefine2PB10Xhap12_4968:HG2_PB_SVrefine2PBcRplusDovetail_9457:HG3_Ill_SVrefine2DISCOVARDovetail_5146:HG3_PB_SVrefine2PBcRDovetail_3120:HG4_Ill_SVrefine2DISCOVARDovetail_5050:HG4_PB_SVrefine2PBcRDovetail_3403;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0871863;ClusterMaxSizeDiff=0.0819022;ClusterMaxEditDist=0.240423;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=363;DistBack=17963;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=230;REFWIDENED=6:40622732-40622961;PctSeqSimilarity=0.959;PctSizeSimilarity=0.9629;PctRecOverlap=0.5438;SizeDiff=-14;StartDistance=-165;EndDistance=-165;GTMatch=0;TruScore=82;MatchId=4650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:94:1/1:0:34:1:30:./.:0:0:0:0:1/1:0:19:./.:4:42:.:.:.
chr6	42887514	HG3_PB_SVrefine2PBcRDovetail_3128	G	GCTCACGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGAGTGGATCATTTGAGGTCAGGAGTTGGAGACCAGCCTGGCCAACATGGTGAAACCTTGTCTCTACAAAAAATACAAAAAAAATCAGCCAGACCTGGTGGCGCACACCTGTAATCCCAATTACTCGGGAGGCTTAAGCAGGAGAATTTCTTGAACCCCAGAAGTGGAGATTGCAGTGAGCTGAGATTGTGCTACTGCACTCCAGCCTGGGTAAGATAGTGAGACTCCATCTCAAAAAAATAAAAGAAAATTTTTGTTACATATTAAATGAGTCATCTTTGCTGAAAAGAATAAGATTGCAGCCTGGGCCTGTTGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4898:HG4_PB_pbsv_6828:HG4_PB_HySA_10070:HG2_PB_HySA_12577:HG2_PB_pbsv_6821:HG2_PB_PB10Xdip_25652:HG3_PB_pbsv_6642:HG2_PB_PB10Xdip_25651:HG4_Ill_manta_1701:HG4_Ill_MetaSV_4492:HG4_Ill_GATKHCSBGrefine_4819:HG3_Ill_manta_1612:HG3_Ill_MetaSV_4496:HG3_Ill_GATKHCSBGrefine_4701:HG2_Ill_manta_1949:HG2_Ill_MetaSV_4317:HG2_Ill_GATKHCSBGrefine_4760:HG4_PB_SVrefine2PBcRDovetail_3409:HG4_PB_SVrefine2Falcon1Dovetail_4115:HG4_Ill_SVrefine2DISCOVARDovetail_5059:HG3_PB_SVrefine2PBcRDovetail_3128:HG3_Ill_SVrefine2DISCOVARDovetail_5158:HG2_PB_SVrefine2PBcRplusDovetail_9463:HG2_PB_SVrefine2PB10Xhap12_4974:HG2_PB_SVrefine2Falcon2Bionano_3414:HG2_PB_SVrefine2Falcon1plusDovetail_10178:HG2_Ill_SVrefine2DISCOVARplusDovetail_11103;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4898:HG4_PB_SVrefine2PBcRDovetail_3409:HG4_PB_SVrefine2Falcon1Dovetail_4115:HG4_Ill_SVrefine2DISCOVARDovetail_5059:HG3_PB_SVrefine2PBcRDovetail_3128:HG3_Ill_SVrefine2DISCOVARDovetail_5158:HG2_PB_SVrefine2PBcRplusDovetail_9463:HG2_PB_SVrefine2PB10Xhap12_4974:HG2_PB_SVrefine2Falcon2Bionano_3414:HG2_PB_SVrefine2Falcon1plusDovetail_10178:HG2_Ill_SVrefine2DISCOVARplusDovetail_11103;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0658436;ClusterMaxSizeDiff=0.0631001;ClusterMaxEditDist=0.269022;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=353;DistBack=74598;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=6:42887515-42887553;PctSeqSimilarity=0.9972;PctSizeSimilarity=1;PctRecOverlap=0.9802;SizeDiff=0;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=99;MatchId=4652.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:1/1:5:36:0:17:./.:0:0:0:0:1/1:0:24:1/1:1:60:.:.:.
chr6	43895474	HG2_PB_SVrefine2Falcon1plusDovetail_10182	T	TCCAGACAATCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCTCTCTGTCGCCCGGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3689:HG3_PB_pbsv_6648:HG2_PB_HySA_12591:HG4_PB_pbsv_6833:HG2_PB_assemblyticsfalcon_22950:HG3_PB_assemblyticsfalcon_22838:HG4_PB_HySA_10081:HG2_PB_HySA_12590:HG2_PB_SVrefine2Falcon2Bionano_3418:HG2_PB_pbsv_6827:HG3_Ill_MetaSV_4497:HG3_Ill_GATKHCSBGrefine_4705:HG2_PB_SVrefine2Falcon1plusDovetail_10182:HG2_Ill_MetaSV_4318:HG4_Ill_MetaSV_4494:HG3_PB_SVrefine2PBcRDovetail_3132:HG4_PB_SVrefine2Falcon1Dovetail_4119:HG3_PB_HySA_10486;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10182:HG3_Ill_GATKHCSBGrefine_4705:HG3_Ill_MetaSV_4497;NumExactMatchSVs=3;ClusterMaxShiftDist=0.131455;ClusterMaxSizeDiff=0.131455;ClusterMaxEditDist=0.2723;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=318;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=6:43895475-43895487;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4653.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:50:1|0:3:39:29:1:./.:0:0:0:0:0/1:31:17:0/1:7:44:.:.:.
chr6	43926365	HG2_Ill_SVrefine2DISCOVARplusDovetail_11105	G	GAGAAGAAGAAGAAGGAGAAGGAGAAGGAGGAGAAGGAGAAGGAGGAGGAGGAGGAGAAGAAGAAGGAGAAGAAGAAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGAAGAAGAAGGGGAGGAGGAGGAGGAGAGGA	20	PASS	ClusterIDs=HG3_PB_pbsv_6649:HG4_PB_HySA_10082:HG4_PB_SVrefine2Falcon1Dovetail_4121:HG2_PB_HySA_12593:HG4_PB_pbsv_6834:HG2_Ill_MetaSV_4319:HG2_Ill_GATKHCSBGrefine_4763:HG4_Ill_MetaSV_4495:HG3_Ill_GATKHCSBGrefine_4706:HG2_PB_PB10Xdip_25662:HG2_PB_PB10Xdip_25661:HG2_PB_HySA_12592:HG4_PB_SVrefine2Falcon1Dovetail_4120:HG2_PB_SVrefine2PBcRplusDovetail_9467:HG4_Ill_SVrefine2DISCOVARDovetail_5064:HG2_PB_SVrefine2Falcon1plusDovetail_10183:HG2_10X_SVrefine210Xhap12_4902:HG3_Ill_SVrefine2DISCOVARDovetail_5161:HG2_PB_SVrefine2Falcon2Bionano_3419:HG2_Ill_SVrefine2DISCOVARplusDovetail_11105:HG2_PB_SVrefine2PB10Xhap12_4979:HG3_PB_SVrefine2PBcRDovetail_3133;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11105:HG2_PB_SVrefine2Falcon2Bionano_3419:HG3_Ill_SVrefine2DISCOVARDovetail_5161;NumExactMatchSVs=3;ClusterMaxShiftDist=0.167147;ClusterMaxSizeDiff=0.167147;ClusterMaxEditDist=0.255814;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=182;DistBack=23217;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=96;REFWIDENED=6:43926366-43926461;PctSeqSimilarity=0.9526;PctSizeSimilarity=0.9286;PctRecOverlap=0.8306;SizeDiff=13;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=90;MatchId=4654.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:2:23:2:27:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr6	44012283	HG2_PB_SVrefine2Falcon1plusDovetail_10185	A	ACACACACACACATATTCATATACATCTTCACACACACCCACGCTCACATACACACACACACATTCATATACACATTCACACACATCCATATACAGCTTCACACACACCCACACACAAACATTCATATACATCTTCACACACACCCACGCTCACATACACACATATTCATAGACACATTCACACACATCCATATACACCTTCACACACACACACACACACAAACATATACATCTTCACACACACCCACGCTCACACACACACACATACATTCATATACACATTCACACACATCCATATACACCTTCACTCACACCCACACACACATTCATATACACCTTCACACACACCCACGCTCACATACACACACACACACATATTCATATACACATTCACACACATCCATATACACCTTTACACACACATTCATATACATCTTCACACACACCCACGCTCACATACACACACACATATTCATATACACATTCACACACATCCATATACACCTTTACACACACATTCATATACATCTTCACACACACCCACGCTCACATACACACACATTCATATACATCTTCACACACACCCACGCTCACATACACATTCATATACATCTTCACACACATCCACACACATTCATATACATCTTCACACACACTCATACACACATATCCATATACACATTTACACACCCACACTTATACATTCACACACATCCATATACGCCTTCACACACACCACACACACATAACACATTCATATACATCTTCACACACTCACACTCACACACATTCATATACACACACATTCATATACACATTCACACACACCCACACTCATATACACCTACCTACATTCATATACACACACATTTACACACATTCATATACATTTTTACACACCCACACACACACTCACACATTCATATACACATTCTCACACACACATGCCCACACACACATTCATATACATCTTCACACAGTGACACTCACATACACACACACATATTCATATACACATTCACACACATCCATATACACCACACACACAAACATATACATCTTCACACACACCCACGCTCACACACACACATACATTCATATACACATTCACACACATCCATATACACCTTCACTCACACCCCCACACAGATTCATATACATCTTCACACACACCACACTCACATACACACACATATATTCATATACACATTCACACACATCCATATACACATTTACACACACATTCATATACATCTTCACACACACCCACGCTCACATACACATTCATATATATCTTCACACACACCCACGCTCACATACACACACATTCATATACATCTTCACACACATCCACACACATTCATATACATCGTCACACACTCACACTCATACACACATATCCATATACACATTTACACACACCCACACTTATACACATTCACACACATCCATATACACCTTCACACACACCCACACACACATACACCATTCATATACATCTTCACACACACTCACATTCAATATACACACTCACACACATTCATATACACATTCCCACACACCCACTCATACACACTCACACGCATTCATATACATCTTCACACACCCACACTCATATACACCTACCTACATTCATATGCACACACACATTCACACACATTCATATACATTTTTACACACCCACACACTCACACTCACACATTCATATACACATTCTCACACACC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4124:HG4_PB_pbsv_6837:HG2_PB_SVrefine2Falcon2Bionano_3421:HG2_PB_PB10Xdip_25681:HG2_PB_PB10Xdip_25680:HG2_PB_SVrefine2Falcon1plusDovetail_10185:HG2_PB_SVrefine2PBcRplusDovetail_9470:HG2_PB_SVrefine2PB10Xhap12_4982:HG2_PB_pbsv_6831:HG3_Ill_SVrefine2DISCOVARDovetail_5163;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10185;NumExactMatchSVs=1;ClusterMaxShiftDist=0.211944;ClusterMaxSizeDiff=0.210773;ClusterMaxEditDist=0.288353;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1724;DistBack=-728;DistForward=246;DistMin=-728;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=389;REFWIDENED=6:44012284-44012672;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9925;PctRecOverlap=0.8417;SizeDiff=-13;StartDistance=-269;EndDistance=-269;GTMatch=1;TruScore=93;MatchId=4655.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:125:1/1:0:32:1:22:./.:0:0:0:0:./.:0:4:1/1:6:204:.:1975:.
chr6	44264678	HG4_Ill_150bpfermikitraw_9179	G	GGACTTGGGCTTGGACTTGGGCTGGGTGAAACCGCCAGTTCACTTACCACAGCCCCTGGACT	20	PASS	ClusterIDs=HG4_PB_HySA_10099:HG2_PB_HySA_12609:HG2_PB_pbsv_6834:HG3_PB_pbsv_6652:HG4_PB_pbsv_6840:HG4_Ill_svaba_8904:HG3_Ill_svaba_8884:HG2_Ill_svaba_8807:HG4_Ill_250bpfermikitraw_9582:HG4_Ill_150bpfermikitraw_9179:HG3_Ill_250bpfermikitraw_9232:HG3_Ill_150bpfermikitraw_9007:HG2_Ill_250bpfermikitraw_9543:HG2_Ill_150bpfermikitraw_8954:HG4_Ill_manta_1704:HG3_Ill_manta_1614:HG3_Ill_Spiral_7491:HG2_Ill_manta_1952:HG2_Ill_SpiralSDKrefine_14597:HG2_PB_PB10Xdip_25690:HG4_Ill_Krunchall_10151:HG3_Ill_scalpel_6849:HG3_Ill_Krunchall_9573:HG2_Ill_scalpel_6762:HG2_Ill_Krunchall_9802:HG3_PB_HySA_10498;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8954:HG2_Ill_250bpfermikitraw_9543:HG3_Ill_150bpfermikitraw_9007:HG3_Ill_250bpfermikitraw_9232:HG4_Ill_150bpfermikitraw_9179:HG4_Ill_250bpfermikitraw_9582;NumExactMatchSVs=6;ClusterMaxShiftDist=0.275862;ClusterMaxSizeDiff=0.275862;ClusterMaxEditDist=0.392523;PBcalls=7;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=-1;DistForward=22569;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=6:44264679-44264732;PctSeqSimilarity=0.9512;PctSizeSimilarity=0.918;PctRecOverlap=0.9344;SizeDiff=5;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=93;MatchId=4657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:64:./.:0:0:0:0:./.:0:0:0:0:0/1:7:35:./.:.:.:.:.:.
chr6	44287248	HG2_PB_SVrefine2Falcon2Bionano_3424	A	ATCTGCTTTCATCGTGTTAAGTTTGAAATTAGACATCTACATGGAGAGGTCATTCAGTGTTCGATATGAAAGTCCAGAGTGCAGAGGCAAGATCTAGCTGCAGCTATAGATTTGGGGGGGGGGGGTACTAGCACATTGGTGGTCCTGGATGAGATAAGATCATCTAGTGGAAGATCAGGATGGAGGAAAAGAGAGGAAGGTCAGATCTTGGGTGCTTCCTGGGGAGCTGGAATAGGAGATGACTGTAGGAGAGGCTGAGAGGGCAGTCAGGGTCAGGAGGAAAACTGGAAAGAGTGTGGTTGCACCAAAGCCTCCAGATGACCGTATTCAAGGAGAACGGAGTGGCCAGTGTGCCAGGTGCTGCGGGCGGTTAAGCAGAAAAAGAGTGGAGACCTAACCAATGGATCAGGCAAGATGGGAGCAGTTTCAGTAGAATGAAGGGAAGGAAAGCCCAACTGGAGCGGGCAAGGAGGGGAGACAAGAAGGTGGAGATAGGAAGTATAGGCAATTCTGGAGGAATGTTTCAGGAAAGAGAAGTAGAAAAAAAACAAAACAGTAGAGGCTGGACTGGACTGTGGGCTCTAGGAAGTATGTTTATTTATTTGTATAAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10187:HG3_PB_pbsv_6653:HG4_PB_pbsv_6841:HG4_PB_HySA_10100:HG2_PB_pbsv_6835:HG2_Ill_MetaSV_4320:HG4_Ill_MetaSV_4496:HG3_Ill_MetaSV_4498:HG3_Ill_GATKHCSBGrefine_4708:HG4_PB_SVrefine2Falcon1Dovetail_4127:HG3_PB_SVrefine2PBcRDovetail_3137:HG2_PB_SVrefine2PBcRplusDovetail_9473:HG2_PB_SVrefine2Falcon2Bionano_3424:HG2_Ill_SVrefine2DISCOVARplusDovetail_11106:HG4_Ill_SVrefine2DISCOVARDovetail_5065:HG2_10X_SVrefine210Xhap12_4905:HG3_Ill_SVrefine2DISCOVARDovetail_5165;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11106:HG2_PB_SVrefine2Falcon2Bionano_3424:HG2_PB_SVrefine2PBcRplusDovetail_9473;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0588703;ClusterMaxSizeDiff=0.0588703;ClusterMaxEditDist=0.255452;PBcalls=9;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=610;DistBack=22569;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=76;REFWIDENED=6:44287249-44287324;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9984;PctRecOverlap=0.9787;SizeDiff=-1;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=99;MatchId=4658.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:88:1/1:0:9:0:6:./.:0:0:0:0:1/1:0:20:./.:5:93:.:.:.
chr6	45260480	HG2_PB_pbsv_6838	A	AGCCGGGCGCGTGGCTCACGCCTGTAATCCCAGCACTTTGGAGGCGCGACGGCGGCGGATCACGAGTCCAGGAGATCGAGACCATGCCTGGCTAACACGGTGAAACCCGCGTCTCTACTACAAAATACAAAAAATTACCGGGCGAGGTTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGAGAAATGGCGTGAAACCCCAGGTGGCGGAAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCGCCTGGGCCGACAGCGAGACCTTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAAGGAGGG	20	PASS	ClusterIDs=HG2_PB_HySA_12619:HG2_PB_pbsv_6838:HG4_PB_pbsv_6844:HG2_PB_assemblyticsfalcon_22972:HG2_PB_SVrefine2PB10Xhap12_4985:HG2_PB_PB10Xdip_25691:HG2_Ill_breakscan11_3690:HG2_PB_SVrefine2Falcon1plusDovetail_10188:HG4_Ill_MetaSV_4498:HG2_PB_SVrefine2Falcon2Bionano_3426:HG4_PB_SVrefine2Falcon1Dovetail_4129;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_6838;NumExactMatchSVs=1;ClusterMaxShiftDist=0.184664;ClusterMaxSizeDiff=0.184664;ClusterMaxEditDist=0.263736;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=348;DistBack=1;DistForward=1989;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:45260481-45260480;PctSeqSimilarity=0.9671;PctSizeSimilarity=0.9856;PctRecOverlap=0.9398;SizeDiff=5;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=96;MatchId=4659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:26:1|0:5:17:20:4:./.:0:0:0:0:0/1:30:6:0/1:4:15:.:.:.
chr6	45852708	HG3_Ill_GATKHC_11392	T	TTTTTTTTTTTTTTTCTTTTTTTTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGAGGAAATAGGTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4131:HG2_PB_PB10Xdip_25695:HG2_PB_PB10Xdip_25694:HG2_PB_assemblyticsfalcon_22977:HG3_Ill_manta_1615:HG3_Ill_Spiral_7509:HG3_Ill_GATKHC_11392:HG3_Ill_GATKHCSBGrefine_4712:HG2_Ill_manta_1953:HG2_Ill_GATKHC_11411:HG2_Ill_GATKHCSBGrefine_4769:HG2_PB_HySA_12623:HG3_PB_pbsv_6657:HG2_PB_pbsv_6840;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4769:HG2_Ill_GATKHC_11411:HG2_Ill_manta_1953:HG3_Ill_GATKHCSBGrefine_4712:HG3_Ill_GATKHC_11392:HG3_Ill_Spiral_7509:HG3_Ill_manta_1615;NumExactMatchSVs=7;ClusterMaxShiftDist=0.302158;ClusterMaxSizeDiff=0.302158;ClusterMaxEditDist=0.323529;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=77;DistBack=0;DistForward=19653;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:45852697-45852712;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4660.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:37:0|1:21:0:2:36:./.:0:0:0:0:0/1:30:14:./.:.:.:.:.:.
chr6	47473301	HG2_PB_SVrefine2Falcon2Bionano_3435	T	TGGCTGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACACCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTTACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCGTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCCGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGAGGCGGCTGGCCGGGCGTGGGGCTGACACCCCCACCTCCCTCCTGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGCGGCCGGGCAGAGGCGCCCCTCAACTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCCACCTCCTCCCGGACAGGGCGGTTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4138:HG4_PB_pbsv_6856:HG3_PB_pbsv_6664:HG2_PB_SVrefine2Falcon2Bionano_3435:HG2_PB_SVrefine2PB10Xhap12_4994;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3435;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0741656;ClusterMaxSizeDiff=0.0716935;ClusterMaxEditDist=0.16535;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=806;DistBack=39019;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=287;REFWIDENED=6:47473302-47473588;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9988;PctRecOverlap=0.9232;SizeDiff=-1;StartDistance=-62;EndDistance=-62;GTMatch=0;TruScore=97;MatchId=4661.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:20:0|1:14:1:5:18:./.:0:0:0:0:0/1:21:4:0/1:10:32:.:.:.
chr6	47633784	HG4_Ill_SVrefine2DISCOVARDovetail_5080	A	ATCTTCTCCTTCCTCCTTCCTTCTTTCTTCCTCCTTCCTCCTTTTTCTTCTCTTTCTCCCTCTCCCTCTCCTTCTCCCTCCCCTTCCCCTTTCCCTTCCCCTCCTTCTCTTCCCTCCCTTCTTTCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTTCCTCCTCCTCCTTCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4919:HG2_PB_HySA_12647:HG2_PB_HySA_12646:HG4_PB_HySA_10129:HG2_Ill_GATKHCSBGrefine_4778:HG2_Ill_MetaSV_4322:HG4_PB_SVrefine2Falcon1Dovetail_4139:HG4_Ill_GATKHCSBGrefine_4832:HG3_Ill_MetaSV_4503:HG3_Ill_GATKHCSBGrefine_4719:HG2_PB_SVrefine2Falcon1plusDovetail_10195:HG3_PB_HySA_10528:HG2_PB_PB10Xdip_25712:HG2_PB_PB10Xdip_25711:HG3_PB_pbsv_6666:HG2_PB_SVrefine2Falcon2Bionano_3437:HG2_PB_pbsv_6852:HG2_10X_SVrefine210Xhap12_4920:HG4_PB_pbsv_6858:HG3_PB_SVrefine2PBcRDovetail_3145:HG2_PB_SVrefine2PBcRplusDovetail_9482:HG4_Ill_SVrefine2DISCOVARDovetail_5080:HG3_Ill_SVrefine2DISCOVARDovetail_5187:HG2_PB_SVrefine2PB10Xhap12_4995:HG2_Ill_SVrefine2DISCOVARplusDovetail_11121;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4919:HG4_Ill_SVrefine2DISCOVARDovetail_5080:HG3_Ill_SVrefine2DISCOVARDovetail_5187:HG2_PB_SVrefine2PB10Xhap12_4995:HG2_Ill_SVrefine2DISCOVARplusDovetail_11121;NumExactMatchSVs=5;ClusterMaxShiftDist=0.245014;ClusterMaxSizeDiff=0.245014;ClusterMaxEditDist=0.337143;PBcalls=15;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=171;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=120;REFWIDENED=6:47633785-47633904;PctSeqSimilarity=0.9802;PctSizeSimilarity=0.9661;PctRecOverlap=0.8305;SizeDiff=-6;StartDistance=-27;EndDistance=-27;GTMatch=1;TruScore=92;MatchId=4662.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:1:12:2:28:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr6	47708256	HG2_PB_SVrefine2Falcon2Bionano_3438	C	CTAGAGGGGGCCAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAGAAAAAAAAGAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3438:HG2_PB_HySA_12649:HG4_PB_pbsv_6859:HG2_PB_assemblyticsfalcon_23000:HG3_PB_assemblyticsfalcon_22886:HG4_PB_SVrefine2Falcon1Dovetail_4140:HG2_PB_pbsv_6853:HG2_PB_SVrefine2Falcon1plusDovetail_10196:HG4_Ill_MetaSV_4501;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3438:HG4_Ill_MetaSV_4501;NumExactMatchSVs=2;ClusterMaxShiftDist=0.13314;ClusterMaxSizeDiff=0.13314;ClusterMaxEditDist=0.225;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=344;DistBack=1126;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:47708257-47708271;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:./.:18:3:6:8:./.:0:0:0:0:0/1:20:15:0/1:9:44:.:.:.
chr6	49561913	HG4_PB_pbsv_6864	T	TGAAAAAGATTAAGGAGGGGAGGCGGGCGCGGTGGCTCACGCCTGTTAATCCCAGCAACTTTGGGAGGCCCGAGGCGGGTGGGATCATGCAGGGTCCAGGAGATCGACGACCATCCTGGCTAACACGCGTGAAACCCGTCTTACTAAAAATACAAAAAATTAGCCCGGGCGCGGTGGGCGGGCGCCTGTAGTCCCAGCTTACTGCGGGGAGGCTGAGGCCGGAGAATGGCGTGAACCCCGGGAAGCGGAGCTTGCCAGTGAGCCGAGATTGCGCGCACTGCAGTCCGGAGTCGCGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAACAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_6864:HG2_PB_pbsv_6858:HG2_PB_assemblyticsfalcon_23018:HG2_Ill_breakscan11_3691:HG2_PB_SVrefine2Falcon1plusDovetail_10201:HG4_PB_HySA_10142;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_6864;NumExactMatchSVs=1;ClusterMaxShiftDist=0.137026;ClusterMaxSizeDiff=0.137026;ClusterMaxEditDist=0.18448;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=358;DistBack=17;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:49561914-49561928;PctSeqSimilarity=0.9544;PctSizeSimilarity=0.9553;PctRecOverlap=0.9554;SizeDiff=16;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4664.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:44:30:./.:17:12:14:3:./.:0:0:0:0:0/1:34:6:0/1:4:9:.:.:.
chr6	49865410	HG3_PB_SVrefine2PBcRDovetail_3150	A	AAATTTATATATATTTTTTATATTTATATTTATATATAAAATATATATATAAAATATATATATATTTAAATATATATATAAATATATATATAAATATATAATATATAAATATATTTATATATTATATGTTTATATATATATTTATATATATTTATATATAATATATTTATATATTATATATTTATATATTTATGTATAATATATTATATATATATTTATATATTATATATTTATATATATTTATATATAATATATTTATATATTATATATTTATATATATTTATATATAATATATTTATATATTATATATTTATATATATTTATATATAATATATTTATATATTATATATTTATATATTTATATATTTATATATATATTTATATTTTATATATTTATATATAGTTATATATAATATATTTATATTTTATATATTTATATATAGTTATATAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9489:HG3_PB_HySA_10545:HG2_PB_pbsv_6861:HG2_PB_SVrefine2Falcon1plusDovetail_10202:HG3_PB_SVrefine2PBcRDovetail_3150:HG4_PB_pbsv_6866:HG2_PB_SVrefine2Falcon2Bionano_3444:HG2_PB_HySA_12682:HG4_PB_SVrefine2Falcon1Dovetail_4144:HG2_PB_SVrefine2PB10Xhap12_5004;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_3150;NumExactMatchSVs=1;ClusterMaxShiftDist=0.329897;ClusterMaxSizeDiff=0.329897;ClusterMaxEditDist=0.331959;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=450;DistBack=10842;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=444;REFWIDENED=6:49865411-49865854;PctSeqSimilarity=0.9209;PctSizeSimilarity=0.805;PctRecOverlap=0.4955;SizeDiff=-109;StartDistance=-228;EndDistance=-228;GTMatch=1;TruScore=74;MatchId=4665.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:1:30:1:27:./.:0:0:0:0:1/1:0:18:./.:3:42:.:.:.
chr6	49889709	HG2_PB_SVrefine2Falcon2Bionano_3445	G	GATATACATTTATATATACATATATACATATGTCAAGTACATATATATGTATATATGTGTATACATATATATGCATATATACGTATACATATATATACATATATACGTATACATATATATACATATATACGTATACATATATATACATATATACGTATACATATATATACATATATACGTATACATATATATACATATATACGTATACATATATATACATATATACGTATACATATATATACATATATACGTATACATATATATACATATATACGTATACATATATACATATATATGTATACGTATATATGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10203:HG4_PB_pbsv_6869:HG4_Ill_GATKHCSBGrefine_4844:HG4_PB_SVrefine2Falcon1Dovetail_4145:HG3_PB_SVrefine2PBcRDovetail_3151:HG3_PB_HySA_10547:HG4_Ill_GATKHCSBGrefine_4845:HG2_PB_SVrefine2PB10Xhap12_5006:HG2_PB_SVrefine2PBcRplusDovetail_9490:HG2_PB_SVrefine2PB10Xhap12_5005:HG3_Ill_SVrefine2DISCOVARDovetail_5198:HG2_PB_SVrefine2Falcon2Bionano_3445:HG2_Ill_SVrefine2DISCOVARplusDovetail_11132;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11132:HG2_PB_SVrefine2Falcon2Bionano_3445:HG3_Ill_SVrefine2DISCOVARDovetail_5198;NumExactMatchSVs=3;ClusterMaxShiftDist=0.354717;ClusterMaxSizeDiff=0.354717;ClusterMaxEditDist=0.381132;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=311;DistBack=23732;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=109;REFWIDENED=6:49889710-49889818;PctSeqSimilarity=0.9833;PctSizeSimilarity=0.9968;PctRecOverlap=0.8457;SizeDiff=1;StartDistance=-48;EndDistance=-48;GTMatch=1;TruScore=94;MatchId=4666.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:87:1/1:6:42:5:30:./.:0:0:0:0:./.:2:13:./.:4:29:.:.:.
chr6	51136753	HG2_Ill_GATKHCSBGrefine_4798	G	GGGAAGGAAGGAGGGAGAAAGGAAAAGAAAGAAGAAAGGGAAGGAAGGAAGGTA	20	PASS	ClusterIDs=HG4_PB_pbsv_6873:HG2_PB_PB10Xdip_25730:HG2_PB_PB10Xdip_25729:HG3_PB_assemblyticsfalcon_22917:HG4_Ill_scalpel_6661:HG4_Ill_GATKHC_11544:HG4_Ill_GATKHCSBGrefine_4848:HG4_Ill_FB_6346:HG4_Ill_250bpfermikitraw_9640:HG3_Ill_scalpel_6913:HG3_Ill_Krunchall_9655:HG3_Ill_GATKHC_11458:HG3_Ill_GATKHCSBGrefine_4736:HG3_Ill_250bpfermikitraw_9309:HG2_Ill_scalpel_6821:HG2_Ill_GATKHC_11485:HG2_Ill_GATKHCSBGrefine_4798:HG2_Ill_FB_6303:HG2_Ill_250bpfermikitraw_9619:HG4_Ill_Krunchall_10213:HG2_Ill_manta_1963:HG3_PB_HySA_10555:HG4_PB_HySA_10154:HG2_PB_HySA_12694;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9619:HG2_Ill_FB_6303:HG2_Ill_GATKHCSBGrefine_4798:HG2_Ill_GATKHC_11485:HG2_Ill_scalpel_6821:HG3_Ill_250bpfermikitraw_9309:HG3_Ill_GATKHCSBGrefine_4736:HG3_Ill_GATKHC_11458:HG3_Ill_Krunchall_9655:HG3_Ill_scalpel_6913:HG4_Ill_250bpfermikitraw_9640:HG4_Ill_FB_6346:HG4_Ill_GATKHCSBGrefine_4848:HG4_Ill_GATKHC_11544:HG4_Ill_scalpel_6661;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0884956;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.126126;PBcalls=7;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=6;DistForward=52754;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=6:51136736-51136775;PctSeqSimilarity=0.9643;PctSizeSimilarity=0.9298;PctRecOverlap=0.9298;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=4668.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:62:1/1:9:31:1:23:./.:0:0:0:0:1/1:0:19:./.:.:.:.:.:.
chr6	52537112	HG2_Ill_breakscan11_3692	C	CAAGGAAGATCGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAAAAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10214:HG2_PB_pbsv_6874:HG2_Ill_breakscan11_3692:HG2_PB_assemblyticsfalcon_23047;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_breakscan11_3692;NumExactMatchSVs=1;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.200608;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=23736;DistForward=32;DistMin=32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:52537113-52537128;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.991;PctRecOverlap=0.988;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:57:22:0|1:50:1:2:17:./.:0:0:0:0:0/1:23:19:0/1:8:33:.:.:.
chr6	52691457	HG2_PB_SVrefine2PBcRplusDovetail_9501	TG	CAGTTGTATGTCCCTTTTACCAGTCATTGGGAATTCCCAAGTCTGTGATCTTGCCAAACGTAAATTCGCAATAATTGTGTGTTGATTACTTGTCTAGAGAACGTAACTTTAGCATAAACACCTACCTTTCCTCTGGCAATGATCATATTCTTAGATTAAGTAAAATGACATCATGACTATTATTTCCCCTCATGACATTAATTTTTCTACTATCATTAAATTCTCGTTGTCTAGTTTTCTAAATTCTTCATTTTTCCATTTCTTTAATGATTGTGAGAATTGTCAAAGTCAAAAGGAGTCACAATGTTAGCAAAACTCTGACAAACACAGCTGAAAAATGCCATAAAGAAAATGTTCTGGCAGCACGCGGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCATGAGGTCAGGAGATTGAGACCATCCAGGCTAACATGATGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGATGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGTGGCGCTTGCAGTGAGCAGAGGTGGCACCAGTGACTTCCAGTCTGGGCGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAGAATGTTCTTACTCTTTGATAACAAAACAAACTAGGAAAAA	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_5098:HG2_PB_assemblyticsPBcR_22275:HG2_PB_SVrefine2PBcRplusDovetail_9501:HG2_PB_SVrefine2PB10Xhap12_5019:HG2_PB_SVrefine2Falcon2Bionano_3454:HG2_PB_PB10Xdip_25743:HG2_PB_PB10Xdip_25742:HG4_PB_assemblyticsfalcon_22462:HG4_PB_SVrefine2Falcon1Dovetail_4153:HG3_PB_assemblyticsfalcon_22933:HG3_PB_SVrefine2PBcRDovetail_3159:HG2_PB_assemblyticsfalcon_23050:HG2_PB_SVrefine2Falcon1plusDovetail_10215:HG2_Ill_Spiral_492:HG3_PB_pbsv_6685:HG4_Ill_MetaSV_4509:HG2_Ill_MetaSV_4331:HG3_Ill_MetaSV_4511:HG4_PB_pbsv_6883:HG3_Ill_SVrefine2DISCOVARDovetail_5206:HG2_PB_pbsv_6875:HG2_Ill_SVrefine2DISCOVARplusDovetail_11143;NumClusterSVs=22;ExactMatchIDs=HG2_PB_PB10Xdip_25742:HG2_PB_PB10Xdip_25743:HG2_PB_SVrefine2Falcon2Bionano_3454:HG2_PB_SVrefine2PB10Xhap12_5019:HG2_PB_SVrefine2PBcRplusDovetail_9501:HG2_PB_assemblyticsPBcR_22275;NumExactMatchSVs=6;ClusterMaxShiftDist=0.17154;ClusterMaxSizeDiff=0.17154;ClusterMaxEditDist=0.27441;PBcalls=15;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=705;DistBack=0;DistForward=43720;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:52691459-52691456;PctSeqSimilarity=0.9979;PctSizeSimilarity=1;PctRecOverlap=0.9986;SizeDiff=0;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4670.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:82:./.:0:0:0:0:./.:0:0:0:0:1/1:0:19:1/1:4:87:.:.:.
chr6	52736233	HG4_Ill_manta_1712	C	CAGATTGTGAAACCTCACTACTTTTTAAAATAAAATAGAAAAGAATAGAAAATATCAGCG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9046:HG3_PB_assemblyticsfalcon_22934:HG2_PB_HySA_12711:HG2_PB_pbsv_6876:HG3_PB_pbsv_6686:HG4_Ill_svaba_8974:HG4_PB_HySA_10167:HG4_Ill_manta_1712:HG4_PB_pbsv_6884:HG4_Ill_Krunchall_10234:HG4_Ill_GATKHC_11564:HG4_Ill_GATKHCSBGrefine_4854:HG4_Ill_250bpfermikitraw_9658:HG4_Ill_150bpfermikitraw_9253:HG3_Ill_svaba_8962:HG3_Ill_manta_1627:HG3_Ill_Krunchall_9674:HG3_Ill_GATKHC_11478:HG3_Ill_GATKHCSBGrefine_4742:HG3_Ill_250bpfermikitraw_9328:HG3_Ill_150bpfermikitraw_9099:HG2_Ill_svaba_8883:HG2_Ill_manta_1969:HG2_Ill_Krunchall_9902:HG2_Ill_GATKHC_11503:HG2_Ill_GATKHCSBGrefine_4803:HG2_Ill_250bpfermikitraw_9635;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9046:HG4_Ill_svaba_8974:HG4_Ill_manta_1712:HG4_Ill_Krunchall_10234:HG4_Ill_GATKHC_11564:HG4_Ill_GATKHCSBGrefine_4854:HG4_Ill_250bpfermikitraw_9658:HG4_Ill_150bpfermikitraw_9253:HG3_Ill_svaba_8962:HG3_Ill_manta_1627:HG3_Ill_Krunchall_9674:HG3_Ill_GATKHC_11478:HG3_Ill_GATKHCSBGrefine_4742:HG3_Ill_250bpfermikitraw_9328:HG3_Ill_150bpfermikitraw_9099:HG2_Ill_svaba_8883:HG2_Ill_manta_1969:HG2_Ill_Krunchall_9902:HG2_Ill_GATKHC_11503:HG2_Ill_GATKHCSBGrefine_4803:HG2_Ill_250bpfermikitraw_9635;NumExactMatchSVs=21;ClusterMaxShiftDist=0.201681;ClusterMaxSizeDiff=0.184874;ClusterMaxEditDist=0.27907;PBcalls=6;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=1053;DistForward=9575;DistMin=1053;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=63;REFWIDENED=6:52736229-52736291;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4671.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:28:0|1:37:4:4:22:./.:0:0:0:0:0/1:19:27:./.:.:.:.:.:.
chr6	52834071	HG4_Ill_GATKHC_11565	G	GCCAAGATCGTGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTTCATCTCAAAAAAAAAAAAAAAAGC	20	PASS	ClusterIDs=HG3_PB_pbsv_6687:HG4_PB_pbsv_6885:HG4_Ill_svaba_8976:HG3_Ill_svaba_8964:HG2_Ill_svaba_8885:HG4_PB_HySA_10168:HG4_Ill_svaba_8975:HG3_Ill_svaba_8963:HG2_Ill_svaba_8884:HG4_PB_assemblyticsfalcon_22463:HG2_PB_assemblyticsPBcR_22276:HG3_PB_assemblyticsfalcon_22936:HG4_Ill_manta_1713:HG4_Ill_GATKHC_11565:HG4_Ill_GATKHCSBGrefine_4855:HG4_Ill_250bpfermikitraw_9659:HG3_Ill_manta_1628:HG3_Ill_Spiral_7570:HG3_Ill_GATKHC_11479:HG3_Ill_GATKHCSBGrefine_4744:HG3_Ill_150bpfermikitraw_9100:HG2_Ill_manta_1970:HG2_Ill_GATKHC_11504:HG2_Ill_GATKHCSBGrefine_4804:HG2_PB_assemblyticsfalcon_23051:HG2_PB_SVrefine2PBcRplusDovetail_9502:HG3_PB_HySA_10569:HG2_PB_PB10Xdip_25745:HG2_PB_PB10Xdip_25744:HG2_PB_HySA_12712;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4804:HG2_Ill_GATKHC_11504:HG2_Ill_manta_1970:HG3_Ill_150bpfermikitraw_9100:HG3_Ill_GATKHCSBGrefine_4744:HG3_Ill_GATKHC_11479:HG3_Ill_Spiral_7570:HG3_Ill_manta_1628:HG4_Ill_250bpfermikitraw_9659:HG4_Ill_GATKHCSBGrefine_4855:HG4_Ill_GATKHC_11565:HG4_Ill_manta_1713;NumExactMatchSVs=12;ClusterMaxShiftDist=0.244898;ClusterMaxSizeDiff=0.244898;ClusterMaxEditDist=0.272109;PBcalls=12;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=0;DistForward=8222;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=6:52834072-52834079;PctSeqSimilarity=0.9733;PctSizeSimilarity=0.9474;PctRecOverlap=0.9481;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4672.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:23:0:25:./.:0:0:0:0:1/1:0:21:./.:.:.:.:.:.
chr6	53210326	HG2_Ill_SVrefine2DISCOVARplusDovetail_11147	C	CTCTGGAATCAGGAACTGTTGTAATTCATCTTTGTATCCAGCCCCTCACACCCAAAATCAGTAACTGAGAAGTCAATGAATTAATTTAAAAAATGAATCAAGTGTGGGCTACAAGGAAGGGAACAGATTTTAATTCA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11147:HG2_10X_SVrefine210Xhap12_4940:HG4_PB_assemblyticsfalcon_22471:HG3_PB_assemblyticsfalcon_22943:HG2_PB_pbsv_6882:HG3_PB_HySA_10573:HG4_PB_SVrefine2Falcon1Dovetail_4156:HG4_PB_pbsv_6890:HG4_PB_HySA_10173:HG2_PB_HySA_12721:HG3_PB_pbsv_6692:HG4_Ill_SVrefine2DISCOVARDovetail_5100:HG2_PB_SVrefine2Falcon2Bionano_3456:HG2_PB_SVrefine2Falcon1plusDovetail_10217;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11147:HG4_Ill_SVrefine2DISCOVARDovetail_5100:HG2_PB_SVrefine2Falcon2Bionano_3456:HG2_PB_SVrefine2Falcon1plusDovetail_10217;NumExactMatchSVs=4;ClusterMaxShiftDist=0.10453;ClusterMaxSizeDiff=0.10453;ClusterMaxEditDist=0.233677;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=136;DistBack=26232;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=131;REFWIDENED=6:53210327-53210457;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9926;PctRecOverlap=0.7883;SizeDiff=1;StartDistance=-28;EndDistance=-28;GTMatch=0;TruScore=92;MatchId=4673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:35:1|0:0:27:34:2:./.:0:0:0:0:0/1:14:27:./.:.:.:.:.:.
chr6	53609680	HG2_PB_SVrefine2PB10Xhap12_5021	T	TAAAGATGCACTTATTTCTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25751:HG2_PB_pbsv_6883:HG4_PB_pbsv_6891:HG2_PB_HySA_12724:HG3_PB_HySA_10576:HG4_PB_HySA_10175:HG3_PB_pbsv_6693:HG2_Ill_MetaSV_4333:HG2_PB_assemblyticsfalcon_23065:HG2_PB_assemblyticsPBcR_22286:HG2_PB_SVrefine2PBcRplusDovetail_9504:HG2_PB_SVrefine2PB10Xhap12_5021:HG2_PB_SVrefine2Falcon1plusDovetail_10218:HG2_Ill_GATKHCSBGrefine_4807:HG2_PB_SVrefine2Falcon2Bionano_3457:HG2_Ill_breakscan11_3693:HG2_PB_PB10Xdip_25752;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10218:HG2_PB_SVrefine2PB10Xhap12_5021:HG2_PB_SVrefine2PBcRplusDovetail_9504;NumExactMatchSVs=3;ClusterMaxShiftDist=0.225403;ClusterMaxSizeDiff=0.225403;ClusterMaxEditDist=0.257603;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=283;DistBack=11540;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:53609681-53609695;PctSeqSimilarity=0.993;PctSizeSimilarity=0.9861;PctRecOverlap=0.9861;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4674.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:93:1/1:1:23:0:42:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr6	53648744	HG2_Ill_MetaSV_4334	T	TAAAAGGCATATAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3694:HG2_PB_pbsv_6884:HG2_PB_assemblyticsfalcon_23066:HG3_PB_pbsv_6694:HG4_PB_assemblyticsfalcon_22475:HG3_PB_assemblyticsfalcon_22946:HG3_PB_HySA_10577:HG2_PB_HySA_12725:HG4_PB_SVrefine2Falcon1Dovetail_4157:HG3_PB_SVrefine2PBcRDovetail_3161:HG3_Ill_MetaSV_4513:HG2_PB_SVrefine2Falcon2Bionano_3458:HG2_PB_SVrefine2Falcon1plusDovetail_10219:HG2_Ill_MetaSV_4334;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_4334:HG2_PB_SVrefine2Falcon1plusDovetail_10219:HG2_PB_SVrefine2Falcon2Bionano_3458:HG3_Ill_MetaSV_4513;NumExactMatchSVs=4;ClusterMaxShiftDist=0.233723;ClusterMaxSizeDiff=0.230384;ClusterMaxEditDist=0.257095;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=313;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=6:53648745-53648758;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4675.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:42:./.:11:13:13:11:./.:0:0:0:0:0/1:28:7:0/1:8:23:.:.:.
chr6	62029870	HG2_Ill_manta_1988	T	TTGGGGAATTGGTTCCATATGAACTTTAAAGTAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCA	20	PASS	ClusterIDs=HG2_PB_pbsv_6924:HG4_PB_pbsv_6929:HG3_PB_pbsv_6728:HG4_Ill_svaba_9027:HG4_Ill_Krunchall_10287:HG4_Ill_GATKHC_11624:HG4_Ill_GATKHCSBGrefine_4888:HG4_Ill_250bpfermikitraw_9701:HG4_Ill_150bpfermikitraw_9296:HG3_Ill_svaba_9026:HG3_Ill_manta_1643:HG3_Ill_Krunchall_9734:HG3_Ill_GATKHC_11535:HG3_Ill_GATKHCSBGrefine_4772:HG3_Ill_250bpfermikitraw_9374:HG3_Ill_150bpfermikitraw_9147:HG2_PB_assemblyticsfalcon_23106:HG2_Ill_svaba_8942:HG2_Ill_manta_1988:HG2_Ill_Krunchall_9968:HG2_Ill_GATKHC_11567:HG2_Ill_GATKHCSBGrefine_4835:HG2_Ill_250bpfermikitraw_9685:HG2_Ill_150bpfermikitraw_9095;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9095:HG2_Ill_250bpfermikitraw_9685:HG2_Ill_GATKHCSBGrefine_4835:HG2_Ill_GATKHC_11567:HG2_Ill_Krunchall_9968:HG2_Ill_manta_1988:HG2_Ill_svaba_8942:HG2_PB_assemblyticsfalcon_23106:HG3_Ill_150bpfermikitraw_9147:HG3_Ill_250bpfermikitraw_9374:HG3_Ill_GATKHCSBGrefine_4772:HG3_Ill_GATKHC_11535:HG3_Ill_Krunchall_9734:HG3_Ill_manta_1643:HG3_Ill_svaba_9026:HG4_Ill_150bpfermikitraw_9296:HG4_Ill_250bpfermikitraw_9701:HG4_Ill_GATKHCSBGrefine_4888:HG4_Ill_GATKHC_11624:HG4_Ill_Krunchall_10287:HG4_Ill_svaba_9027;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0851064;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.255319;PBcalls=4;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=68;DistBack=-1;DistForward=24106;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=6:62029869-62029871;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4678.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:40:0|1:34:1:3:36:./.:0:0:0:0:0/1:32:31:./.:.:.:.:.:.
chr6	63540958	HG3_Ill_SVrefine2DISCOVARDovetail_5239	A	AAAGGATGAGTTCATGTCCTTTGCAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAGTTATCACAAGATCAGAAAACCAAACACAGCATCTCACTCATAAGTGGGAGTTGAACGATGAGAACATATGGATACAGAGAGGGGAACATCACACCATGACCTGTCATGGGGTGGGGGCCTAGGGGAGGTATAACATTAGGAGAAATACCTAATTTAGGTGACGGGTTGATGGATGCGGCAAACCACCAGGGCATGTGTATACCTATGTAACAAAACTGCACGTTCCACACATGTAACCCAGAACTTAAAGTATAATAATAATAATAATAATAATAATAATAAAATATTGTAGTGCTCCAGGCCTCATCCTCGTTCCTCTTGTCTTCTCTATTTACATCCATTCCTTTGGTAGTCCTTACTGTCTCTTGTCTTTATATGTTAACTAGACACACCAAAAAAACTATTGCTAATATGTATCTAAAATTTTTCTTCTTCTTTTTTTTATAGTTTTTCTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTACATTTTACAGACC	20	PASS	ClusterIDs=HG2_PB_HySA_12816:HG3_PB_HySA_10644:HG4_PB_HySA_10240:HG3_PB_pbsv_6734:HG3_PB_assemblyticsfalcon_23001:HG4_PB_pbsv_6937:HG2_PB_assemblyticsfalcon_23115:HG2_PB_pbsv_6933:HG4_PB_SVrefine2PBcRDovetail_3421:HG3_PB_SVrefine2Falcon1Dovetail_4181:HG4_PB_SVrefine2Falcon1Dovetail_4186:HG4_Ill_MetaSV_4527:HG4_Ill_GATKHCSBGrefine_4893:HG3_Ill_SVrefine2DISCOVARDovetail_5239:HG3_Ill_MetaSV_4532:HG3_Ill_GATKHCSBGrefine_4778:HG2_PB_SVrefine2Falcon2Bionano_3479:HG2_Ill_MetaSV_4352:HG2_Ill_GATKHCSBGrefine_4841:HG2_10X_SVrefine210Xhap12_4961:HG3_PB_SVrefine2PBcRDovetail_3182:HG2_PB_SVrefine2Falcon1plusDovetail_10251;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4961:HG2_Ill_GATKHCSBGrefine_4841:HG2_Ill_MetaSV_4352:HG2_PB_SVrefine2Falcon2Bionano_3479:HG3_Ill_GATKHCSBGrefine_4778:HG3_Ill_MetaSV_4532:HG3_Ill_SVrefine2DISCOVARDovetail_5239:HG4_Ill_GATKHCSBGrefine_4893:HG4_Ill_MetaSV_4527;NumExactMatchSVs=9;ClusterMaxShiftDist=0.140747;ClusterMaxSizeDiff=0.140747;ClusterMaxEditDist=0.251667;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=561;DistBack=3836;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=6:63540959-63540963;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:39:0|1:19:2:0:28:./.:0:0:0:0:0/1:31:20:0/1:16:65:.:.:.
chr6	63762244	HG3_Ill_manta_1648	C	CTTTTACTTTTTAATAATAGCCATTCTGGCAGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTAAATTTCTCTAAAGATCAGTA	20	PASS	ClusterIDs=HG2_PB_pbsv_6935:HG4_PB_HySA_10242:HG4_PB_pbsv_6940:HG2_PB_PB10Xdip_25876:HG2_PB_PB10Xdip_25875:HG2_Ill_breakscan11_3698:HG4_Ill_svaba_9038:HG4_Ill_manta_1728:HG4_Ill_Krunchall_10302:HG4_Ill_GATKHCSBGrefine_4894:HG4_Ill_250bpfermikitraw_9714:HG4_Ill_150bpfermikitraw_9308:HG3_PB_assemblyticsfalcon_23004:HG3_Ill_svaba_9036:HG3_Ill_manta_1648:HG3_Ill_Spiral_7618:HG3_Ill_Krunchall_9743:HG3_Ill_GATKHCSBGrefine_4779:HG3_Ill_250bpfermikitraw_9389:HG3_Ill_150bpfermikitraw_9162:HG2_PB_assemblyticsPBcR_22339:HG2_Ill_svaba_8952:HG2_Ill_manta_1991:HG2_Ill_SpiralSDKrefine_14723:HG2_Ill_Krunchall_9983:HG2_Ill_GATKHC_11584:HG2_Ill_GATKHCSBGrefine_4842:HG2_Ill_250bpfermikitraw_9697:HG2_Ill_150bpfermikitraw_9105:HG3_PB_pbsv_6736;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9105:HG2_Ill_250bpfermikitraw_9697:HG2_Ill_GATKHCSBGrefine_4842:HG2_Ill_GATKHC_11584:HG2_Ill_Krunchall_9983:HG2_Ill_SpiralSDKrefine_14723:HG2_Ill_manta_1991:HG2_Ill_svaba_8952:HG2_PB_assemblyticsPBcR_22339:HG3_Ill_150bpfermikitraw_9162:HG3_Ill_250bpfermikitraw_9389:HG3_Ill_GATKHCSBGrefine_4779:HG3_Ill_Krunchall_9743:HG3_Ill_Spiral_7618:HG3_Ill_manta_1648:HG3_Ill_svaba_9036:HG3_PB_assemblyticsfalcon_23004:HG4_Ill_150bpfermikitraw_9308:HG4_Ill_250bpfermikitraw_9714:HG4_Ill_GATKHCSBGrefine_4894:HG4_Ill_Krunchall_10302:HG4_Ill_manta_1728:HG4_Ill_svaba_9038;NumExactMatchSVs=23;ClusterMaxShiftDist=0.079096;ClusterMaxSizeDiff=0.079096;ClusterMaxEditDist=0.275862;PBcalls=8;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=85;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=6:63762243-63762245;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4680.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:57:1/1:1:24:3:25:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr6	64384184	HG2_Ill_SVrefine2DISCOVARplusDovetail_11186	T	TATATATGTGTGTGTATATATATACACACACATATATGTGTATGTGTGTATATATACACGTGTGTGTATATATACACACACACAC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9112:HG2_PB_HySA_12827:HG2_PB_pbsv_6936:HG4_PB_HySA_10249:HG3_PB_HySA_10651:HG2_PB_PB10Xdip_25877:HG3_PB_pbsv_6737:HG2_Ill_breakscan11_3699:HG4_Ill_manta_1729:HG4_Ill_GATKHC_11645:HG3_Ill_GATKHC_11558:HG4_PB_SVrefine2Falcon1Dovetail_4188:HG4_Ill_SVrefine2DISCOVARDovetail_5129:HG4_Ill_GATKHC_11644:HG4_Ill_GATKHCSBGrefine_4895:HG4_Ill_250bpfermikitraw_9721:HG3_PB_SVrefine2PBcRDovetail_3185:HG3_PB_SVrefine2Falcon1Dovetail_4184:HG3_Ill_SVrefine2DISCOVARDovetail_5245:HG3_Ill_GATKHC_11557:HG3_Ill_GATKHCSBGrefine_4780:HG3_Ill_250bpfermikitraw_9398:HG2_PB_SVrefine2PBcRplusDovetail_9536:HG2_PB_SVrefine2PB10Xhap12_5070:HG2_PB_SVrefine2Falcon2Bionano_3480:HG2_PB_SVrefine2Falcon1plusDovetail_10252:HG2_Ill_SVrefine2DISCOVARplusDovetail_11186:HG2_Ill_Krunchall_9993:HG2_Ill_GATKHC_11592:HG2_Ill_GATKHCSBGrefine_4843;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9112:HG4_PB_SVrefine2Falcon1Dovetail_4188:HG4_Ill_SVrefine2DISCOVARDovetail_5129:HG4_Ill_GATKHC_11644:HG4_Ill_GATKHCSBGrefine_4895:HG4_Ill_250bpfermikitraw_9721:HG3_PB_SVrefine2PBcRDovetail_3185:HG3_PB_SVrefine2Falcon1Dovetail_4184:HG3_Ill_SVrefine2DISCOVARDovetail_5245:HG3_Ill_GATKHC_11557:HG3_Ill_GATKHCSBGrefine_4780:HG3_Ill_250bpfermikitraw_9398:HG2_PB_SVrefine2PBcRplusDovetail_9536:HG2_PB_SVrefine2PB10Xhap12_5070:HG2_PB_SVrefine2Falcon2Bionano_3480:HG2_PB_SVrefine2Falcon1plusDovetail_10252:HG2_Ill_SVrefine2DISCOVARplusDovetail_11186:HG2_Ill_Krunchall_9993:HG2_Ill_GATKHC_11592:HG2_Ill_GATKHCSBGrefine_4843;NumExactMatchSVs=20;ClusterMaxShiftDist=0.183784;ClusterMaxSizeDiff=0.183784;ClusterMaxEditDist=0.25;PBcalls=13;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=6:64384185-64384237;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:0:16:0:7:./.:0:0:0:0:0/1:13:36:./.:.:.:.:.:.
chr6	64398158	HG2_PB_SVrefine2Falcon2Bionano_3481	T	ACTCCGCTCGCCTCCCCTCCCCCTCCCCCGTCCCTCTCCCATCCCCCTCCCCTCTCCCATCCCCCTCCCATCCCCCTCCCCTCTCCCATCCCCCTCCCCCTCCCCTCCCCCTCCCCCTCCCCTCCCCCCTTCCCCTCCCCTCCCCCCTTCCCCTCCTCCCCCCTCCCC	10	PASS	ClusterIDs=HG3_PB_pbsv_6738:HG2_PB_PB10Xdip_25878:HG3_PB_SVrefine2PBcRDovetail_3186:HG2_PB_assemblyticsfalcon_23125:HG2_PB_SVrefine2Falcon1plusDovetail_10253:HG2_PB_SVrefine2PB10Xhap12_5071:HG2_PB_SVrefine2Falcon2Bionano_3481:HG2_PB_assemblyticsPBcR_22346:HG2_PB_SVrefine2PBcRplusDovetail_9537:HG4_PB_pbsv_6942:HG2_PB_HySA_12828:HG4_PB_HySA_10250:HG2_PB_pbsv_6937:HG4_PB_SVrefine2PBcRDovetail_3424:HG4_PB_SVrefine2Falcon1Dovetail_4189;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3481:HG2_PB_SVrefine2PB10Xhap12_5071;NumExactMatchSVs=2;ClusterMaxShiftDist=0.31454;ClusterMaxSizeDiff=0.31454;ClusterMaxEditDist=0.362018;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=167;DistBack=-70;DistForward=39471;DistMin=-70;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=6:64398120-64398157;PctSeqSimilarity=0.9855;PctSizeSimilarity=0.994;PctRecOverlap=0.7633;SizeDiff=-1;StartDistance=39;EndDistance=39;GTMatch=0;TruScore=91;MatchId=4682.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:1:34:1:5:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr6	64836224	HG3_PB_SVrefine2PBcRDovetail_3188	T	TAAGAAAATGTGGCACATAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAATCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_HySA_10653:HG3_PB_pbsv_6740:HG4_PB_SVrefine2Falcon1Dovetail_4191:HG2_PB_pbsv_6939:HG3_PB_SVrefine2PBcRDovetail_3188:HG4_PB_assemblyticsfalcon_22539:HG3_PB_assemblyticsfalcon_23016:HG2_PB_assemblyticsfalcon_23129:HG3_PB_SVrefine2Falcon1Dovetail_4186:HG2_PB_SVrefine2Falcon1plusDovetail_10255;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_3188:HG4_PB_SVrefine2Falcon1Dovetail_4191;NumExactMatchSVs=2;ClusterMaxShiftDist=0.229947;ClusterMaxSizeDiff=0.229947;ClusterMaxEditDist=0.308108;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=194;DistBack=4425;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=6:64836225-64836242;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9948;PctRecOverlap=0.9897;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4683.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:0|1:19:2:1:21:./.:0:0:0:0:0/1:23:4:./.:.:.:.:.:.
chr6	65000859	HG4_Ill_GATKHCSBGrefine_4898	G	GTAGAACTTTATTTTTAGATGCTGAAATTTAAATTTCATACAATTTTCAAGTGTCAAAAATATTACTCATTTTATTTTTCTAACCATTTAAAATTAAAAAAAATCTTTATTCTCAGGCTTTGTAAAGACAAGTGGTAGACTGAATTTAACTTGTGGCTGCAGTTTGGTGATCTCTGAGGCAAGGCGACTAGAAAAGGTTGCCACTGTCTGAACTGCTGCCTTTAGTGAAAGCTCCACATTGCTTTGGTGGACAGCTAGATGTATGTCCTTTAGGCTGCTCCTCTGGCCACTAAATATCCATGCGCTTTCCCTTCCTCTCATACAGAATGTATCCAGCCCCTTCTCAAAAGATATAGCAGGCATCTCATCCATCCAATCACTGCATCTAGCTCAGTGTCAGTGATTTCTGTGTGATGTCCAGTTCTCTTCATCTGGCTGTGGCTCTTTTAGGTCTGCAGAACCACAAACTAAAACACTATTCTTCGACTATCCTTGATATAAACAGGTGGAGCAGGGGCAGGATAACTGCACAAAATGCCCATACACAAATGGAGGAACATGATTGCATAGCAATAATGAAAAATGGCTAATTAATTACTATAGTATAATGCAGAGGGGCAAAGCATTATAATAGATAATATAGTATAATGATGATATTATAATGCTAGTATATTGCTGTGCACCTCTGCATTATACTATAAAGTTTTTTTATTAGATTTATTCTCTTGGGGAGTAACTTTCTCATCCATTGCACCTGGCCTCCAGTCATATCTGAAGAGTTTTGGAGCAGTATATACTCCTTGGGGAATCCACAGCTTTCACATACTGTAAAAATTTACACTTTAGTATAAATTTAAAGGGCCTAAGTGTCATTTTATAGTTACAGGCTTTTTTTGACTTAGGTTTTTGTTTTTTTTTTTTTTTTTGAAATTATACTTAAAACAACATTTAGGAAGCACTGATTTATTTGCATCTAGTCTGATACATGTTAATAACAACACATATTGTTCTTTCTTTGGCATAATTCTAAAGCTGGCTCTATTTCTTTATTTTTCTTTCCCTATCATAACTTTATCTCTCAACTTAATGACAGATGCCTGAGGTGATCTGAACAATATGCTTGGAGGAAATGGAGCAACCTTTGATTTGATATTTGGTGCAGTTGGTTCTTCTACTTCACTAACATATCTTAATGAGCCTGTGTTACTTCTAGCATTATAACTTCTTCATTTTTTTCTTGTGGGAGGCTCTAGAAATAGCTTTCTTAACTTCAGAAGCTTCAATCATAACCTGTGTCCTTGAAGTCTTCCTCATCCTCAATGGCAGCAAATGCATTTTATAAACATAAGATAGAAATCACACACTTTAGTTGGCATTCCATTGGTGAGGACTAGCTCTGTAGCCCCACCTAGA	20	PASS	ClusterIDs=HG3_Ill_Spiral_7628:HG4_PB_pbsv_6944:HG4_PB_assemblyticsfalcon_22540:HG2_PB_SVrefine2PB10Xhap12_5074:HG4_Ill_MetaSV_4531:HG4_Ill_SVrefine2DISCOVARDovetail_5131:HG4_Ill_GATKHCSBGrefine_4898:HG3_Ill_SVrefine2DISCOVARDovetail_5247:HG2_Ill_SVrefine2DISCOVARplusDovetail_11187:HG2_10X_SVrefine210Xhap12_4968:HG4_PB_SVrefine2PBcRDovetail_3426:HG4_PB_SVrefine2Falcon1Dovetail_4192:HG2_PB_PB10Xdip_25882:HG4_Ill_Spiral_580:HG2_Ill_Spiral_500;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4968:HG2_Ill_SVrefine2DISCOVARplusDovetail_11187:HG3_Ill_SVrefine2DISCOVARDovetail_5247:HG4_Ill_GATKHCSBGrefine_4898:HG4_Ill_SVrefine2DISCOVARDovetail_5131;NumExactMatchSVs=5;ClusterMaxShiftDist=0.139168;ClusterMaxSizeDiff=0.139168;ClusterMaxEditDist=0.169297;PBcalls=6;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=1412;DistBack=27889;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=6:65000860-65000863;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:58:0|1:31:1:0:31:./.:0:0:0:0:0/1:37:14:0/1:36:54:.:6692:.
chr6	65005337	HG2_Ill_SVrefine2DISCOVARplusDovetail_11188	G	GGAGGAGGAGGAGAAGAAGAAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10256:HG2_PB_PB10Xdip_25883:HG2_PB_SVrefine2Falcon2Bionano_3482:HG3_PB_SVrefine2PBcRDovetail_3189:HG3_Ill_SVrefine2DISCOVARDovetail_5248:HG2_Ill_SVrefine2DISCOVARplusDovetail_11188:HG2_10X_SVrefine210Xhap12_4969:HG2_Ill_SpiralSDKrefine_14732:HG3_Ill_svaba_9046:HG2_PB_HySA_12831:HG2_Ill_svaba_8961:HG3_PB_pbsv_6742:HG2_PB_SVrefine2PBcRplusDovetail_9539;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4969:HG2_Ill_SVrefine2DISCOVARplusDovetail_11188:HG3_Ill_SVrefine2DISCOVARDovetail_5248:HG3_PB_SVrefine2PBcRDovetail_3189;NumExactMatchSVs=4;ClusterMaxShiftDist=0.235294;ClusterMaxSizeDiff=0.235294;ClusterMaxEditDist=0.284314;PBcalls=7;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=101;DistBack=54;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=170;REFWIDENED=6:65005214-65005383;PctSeqSimilarity=0.9515;PctSizeSimilarity=1;PctRecOverlap=0.6832;SizeDiff=0;StartDistance=32;EndDistance=32;GTMatch=1;TruScore=87;MatchId=4685.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:65:1/1:4:37:4:21:./.:0:0:0:0:./.:0:5:./.:.:.:.:6692:.
chr6	65022876	HG4_PB_SVrefine2PBcRDovetail_3428	G	GGATCACAACTCCTTGCAGCAAGGGAACAAAACTGGATGAACAATGAGTTTGATGAATTGGAAGAAGTAGGCTTCAGAAGGTAGGTAATAACAAACTCCTCTGAGCTAAAGGAGCATGTCCTAACACAATGCAAGGAAGCTAAGAACCTTAAAAACAGGTTAAACGAATTGCTAACTAGAATAACCAGTTTAGAGAAGAACATAAATGACCTGATGGAGCTGAAAAACACAGCAAGAAAACTTCATGAAGCATACACAAGTTGCAACAGCCAAATCGATCAAGCAGAAGAAAGGATATCAGAGATTGAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9540:HG4_PB_pbsv_6947:HG2_PB_pbsv_6944:HG2_PB_HySA_12832:HG4_PB_HySA_10254:HG4_PB_SVrefine2PBcRDovetail_3428:HG3_PB_SVrefine2Falcon1Dovetail_4189;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9540:HG4_PB_SVrefine2PBcRDovetail_3428:HG3_PB_SVrefine2Falcon1Dovetail_4189;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0288;ClusterMaxSizeDiff=0.0224;ClusterMaxEditDist=0.158479;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=308;DistBack=-307;DistForward=1210;DistMin=-307;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=313;REFWIDENED=6:65022877-65023189;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:57:0|1:28:1:2:32:./.:0:0:0:0:0/1:4:9:./.:2:12:.:.:.
chr6	65988221	HG3_Ill_GATKHCSBGrefine_4792	A	ATATATATAGATTCTATATATTCTATATATAGAATCTATATATATATAGATTCTATATATTC	20	PASS	ClusterIDs=HG4_PB_HySA_10264:HG4_PB_assemblyticsfalcon_22551:HG2_PB_PB10Xdip_25890:HG3_PB_pbsv_6752:HG2_PB_pbsv_6951:HG4_Ill_svaba_9057:HG4_PB_pbsv_6951:HG4_Ill_Krunchall_10322:HG4_Ill_GATKHC_11661:HG4_Ill_GATKHCSBGrefine_4905:HG4_Ill_250bpfermikitraw_9735:HG4_Ill_150bpfermikitraw_9328:HG3_Ill_svaba_9058:HG3_Ill_manta_1651:HG3_Ill_Spiral_7638:HG3_Ill_Krunchall_9770:HG3_Ill_GATKHC_11577:HG3_Ill_GATKHCSBGrefine_4792:HG3_Ill_250bpfermikitraw_9411:HG3_Ill_150bpfermikitraw_9184:HG2_PB_assemblyticsPBcR_22365:HG2_Ill_svaba_8969:HG2_Ill_Krunchall_10005:HG2_Ill_GATKHC_11605:HG2_Ill_GATKHCSBGrefine_4850:HG2_Ill_FB_6361:HG2_Ill_250bpfermikitraw_9716:HG2_Ill_150bpfermikitraw_9124:HG2_PB_assemblyticsfalcon_23144:HG2_Ill_manta_1995;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9124:HG2_Ill_250bpfermikitraw_9716:HG2_Ill_FB_6361:HG2_Ill_GATKHCSBGrefine_4850:HG2_Ill_GATKHC_11605:HG2_Ill_Krunchall_10005:HG2_Ill_svaba_8969:HG2_PB_assemblyticsPBcR_22365:HG3_Ill_150bpfermikitraw_9184:HG3_Ill_250bpfermikitraw_9411:HG3_Ill_GATKHCSBGrefine_4792:HG3_Ill_GATKHC_11577:HG3_Ill_Krunchall_9770:HG3_Ill_Spiral_7638:HG3_Ill_manta_1651:HG3_Ill_svaba_9058:HG4_Ill_150bpfermikitraw_9328:HG4_Ill_250bpfermikitraw_9735:HG4_Ill_GATKHCSBGrefine_4905:HG4_Ill_GATKHC_11661:HG4_Ill_Krunchall_10322:HG4_Ill_svaba_9057;NumExactMatchSVs=22;ClusterMaxShiftDist=0.112;ClusterMaxSizeDiff=0.112;ClusterMaxEditDist=0.287879;PBcalls=8;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=61;DistBack=56;DistForward=50;DistMin=50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=112;REFWIDENED=6:65988165-65988276;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4687.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:50:1/1:2:15:2:26:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr6	66163966	HG2_Ill_SVrefine2DISCOVARplusDovetail_11198	T	TCTATTTTTCATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGCGACTACAGGCGCCCGCCACTACTCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTTTTAGCCGGGATGTTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25893:HG3_PB_HySA_10668:HG2_PB_pbsv_6953:HG4_PB_pbsv_6954:HG3_PB_pbsv_6754:HG2_PB_HySA_12849:HG4_PB_assemblyticsfalcon_22555:HG3_PB_assemblyticsfalcon_23033:HG2_PB_assemblyticsPBcR_22370:HG3_PB_HySA_10667:HG4_PB_HySA_10266:HG4_PB_SVrefine2PBcRDovetail_3433:HG4_PB_SVrefine2Falcon1Dovetail_4199:HG4_Ill_MetaSV_4534:HG4_Ill_GATKHCSBGrefine_4907:HG3_PB_SVrefine2PBcRDovetail_3195:HG3_PB_SVrefine2Falcon1Dovetail_4194:HG3_Ill_SVrefine2DISCOVARDovetail_5258:HG3_Ill_MetaSV_4539:HG3_Ill_GATKHCSBGrefine_4796:HG2_PB_SVrefine2PBcRplusDovetail_9547:HG2_PB_SVrefine2PB10Xhap12_5081:HG2_PB_SVrefine2Falcon2Bionano_3487:HG2_Ill_SVrefine2DISCOVARplusDovetail_11198:HG2_Ill_MetaSV_4359:HG2_Ill_GATKHCSBGrefine_4854:HG2_PB_SVrefine2Falcon1plusDovetail_10262:HG2_Ill_breakscan11_3700:HG2_PB_HySA_12848;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4854:HG2_Ill_MetaSV_4359:HG2_Ill_SVrefine2DISCOVARplusDovetail_11198:HG2_PB_SVrefine2Falcon2Bionano_3487:HG2_PB_SVrefine2PB10Xhap12_5081:HG2_PB_SVrefine2PBcRplusDovetail_9547:HG3_Ill_GATKHCSBGrefine_4796:HG3_Ill_MetaSV_4539:HG3_Ill_SVrefine2DISCOVARDovetail_5258:HG3_PB_SVrefine2Falcon1Dovetail_4194:HG3_PB_SVrefine2PBcRDovetail_3195:HG4_Ill_GATKHCSBGrefine_4907:HG4_Ill_MetaSV_4534;NumExactMatchSVs=13;ClusterMaxShiftDist=0.132901;ClusterMaxSizeDiff=0.132901;ClusterMaxEditDist=0.212418;PBcalls=20;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=310;DistBack=6492;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:66163967-66163982;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4688.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:80:1/1:0:28:0:17:./.:0:0:0:0:1/1:0:19:1/1:2:51:.:.:.
chr6	66816116	HG2_Ill_GATKHCSBGrefine_4860	C	CTTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACTCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA	20	PASS	ClusterIDs=HG4_PB_HySA_10272:HG3_PB_pbsv_6761:HG2_PB_pbsv_6960:HG4_PB_pbsv_6964:HG4_PB_assemblyticsfalcon_22561:HG3_PB_assemblyticsfalcon_23039:HG2_Ill_breakscan11_3701:HG4_Ill_MetaSV_4540:HG2_PB_SVrefine2Falcon2Bionano_3494:HG2_Ill_GATKHCSBGrefine_4860:HG4_PB_SVrefine2Falcon1Dovetail_4205:HG3_PB_SVrefine2Falcon1Dovetail_4202;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4860:HG2_PB_SVrefine2Falcon2Bionano_3494;NumExactMatchSVs=2;ClusterMaxShiftDist=0.12943;ClusterMaxSizeDiff=0.12943;ClusterMaxEditDist=0.18806;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=315;DistBack=1;DistForward=2;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=6:66816117-66816124;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4689.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:38:0|1:31:0:0:28:./.:0:0:0:0:0/1:30:14:0/1:8:35:.:.:.
chr6	67862155	HG4_Ill_150bpfermikitraw_9351	A	ATATATTCTATATAACTATATATGAATATATATTCTAAATAACTATGTATGAATG	20	PASS	ClusterIDs=HG4_PB_HySA_10282:HG3_PB_HySA_10688:HG4_PB_pbsv_6971:HG4_Ill_GATKHC_11684:HG3_Ill_GATKHC_11602:HG2_Ill_GATKHC_11626:HG2_PB_assemblyticsPBcR_22397:HG3_PB_pbsv_6770:HG4_Ill_Krunchall_10353:HG2_PB_pbsv_6967:HG4_Ill_250bpfermikitraw_9760:HG4_Ill_150bpfermikitraw_9351:HG4_Ill_250bpfermikitraw_9759:HG4_Ill_150bpfermikitraw_9350:HG3_Ill_Krunchall_9795;NumClusterSVs=15;ExactMatchIDs=HG4_Ill_150bpfermikitraw_9351:HG4_Ill_250bpfermikitraw_9760:HG4_Ill_Krunchall_10353;NumExactMatchSVs=3;ClusterMaxShiftDist=0.146789;ClusterMaxSizeDiff=0.12844;ClusterMaxEditDist=0.26087;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=130;DistForward=43;DistMin=43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=36;REFWIDENED=6:67862154-67862192;PctSeqSimilarity=0.9821;PctSizeSimilarity=1;PctRecOverlap=0.9818;SizeDiff=0;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=98;MatchId=4691.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:53:1/1:3:23:2:19:./.:0:0:0:0:0/1:19:35:./.:.:.:.:.:.
chr6	68502427	HG2_PB_SVrefine2PBcRplusDovetail_9566	T	TCGAAAGTGATTATTTTTTTTTTTATTTTTTTTTTATTTTTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25919:HG2_PB_pbsv_6978:HG4_PB_HySA_10297:HG3_PB_pbsv_6782:HG2_Ill_breakscan11_3705:HG2_PB_assemblyticsPBcR_22411:HG2_PB_HySA_12883:HG4_PB_pbsv_6987:HG2_PB_SVrefine2Falcon1plusDovetail_10279:HG4_Ill_MetaSV_4546:HG4_Ill_GATKHCSBGrefine_4936:HG3_Ill_MetaSV_4547:HG3_Ill_GATKHCSBGrefine_4813:HG2_PB_SVrefine2PBcRplusDovetail_9566:HG2_PB_SVrefine2PB10Xhap12_5097:HG2_PB_SVrefine2Falcon2Bionano_3502:HG2_Ill_MetaSV_4364:HG2_Ill_GATKHCSBGrefine_4873:HG2_Ill_manta_2008:HG2_10X_SVrefine210Xhap12_4990:HG4_PB_SVrefine2Falcon1Dovetail_4215:HG4_PB_assemblyticsfalcon_22586:HG4_PB_SVrefine2PBcRDovetail_3448:HG2_PB_PB10Xdip_25920;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4873:HG2_Ill_MetaSV_4364:HG2_PB_SVrefine2Falcon2Bionano_3502:HG2_PB_SVrefine2PB10Xhap12_5097:HG2_PB_SVrefine2PBcRplusDovetail_9566:HG3_Ill_GATKHCSBGrefine_4813:HG3_Ill_MetaSV_4547:HG4_Ill_GATKHCSBGrefine_4936:HG4_Ill_MetaSV_4546;NumExactMatchSVs=9;ClusterMaxShiftDist=0.147929;ClusterMaxSizeDiff=0.147929;ClusterMaxEditDist=0.210059;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=338;DistBack=24452;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=6:68502428-68502445;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4692.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:67:./.:0:2:0:2:./.:0:0:0:0:1/1:0:32:1/1:2:65:.:.:.
chr6	68511985	HG2_PB_SVrefine2PB10Xhap12_5098	A	AATATATACATATTTGTTATATATCTATTTATAAATAAATAAACATAAATATATAAATAAATATAAATATATAAATAAATATATATTTATTATATATAAATATATAAATAATATATGTATTTATTATATATAAATATATATATTAAATAAATAATATATAAATAAATAAATATACAAAATAAATATATATATGAAATAAATATATATTATAAATAAATATAAATATATAAATAAGTATAAATATATATAAATATAAACATATAAATAAATATAAATATATGTAAATATATATTTATAAATAAATATAAATATATGTAAATATATATTTATAAATAAATATAAATATATGTAAATATATATTTATAAATAAATATAAATATATGTAAATATATATTTATAAATAAATATAAATATATGTAAATATATATTTATATAAATATAAATATTTATAAATATATATTTATATATATATAAATATATATTTATAAATATATATAAATATATATTTATAAATATATATTTATATATATATAAATATATATTTATAAATATATATAAATATATATTTATAAATATATATAAATATAAATATATATAAATATATATTTATATATATAAATATATATTTATATATATTTATATTTATATATATTTATAAATATATATAACTATATACAAAAATATATTTATAAATATATATAAATATATAAAAATATATTTATAAATATATATAAATATATAAAAATATATTTATAAATATATATAAATATATAAAAATATATTTATAAATATATATAAATATATAAAAATATATTTATAAATAAATATAAACATATAAAAATATATATTTATAAATATATAAAAATATATATTTATAAATAAATATATATAAATAAATATATATTTATAAATAAATATATATAAATAAATATATATTTATAAATAAATATATATAAATAAATATATAATTGTAAAAAAAGATATATAAATAAATATATATTTATAAATAAAGATATATAAATAAATATATATTTATAAATAAATATATAAATAAATAAATATATATTTATAAATAAATATATATTTATAAATATATATTTATAAATATATATATATTTATAAATATATATATATTTATAAATAAATATAAATAAATATATTTATAAATAAATATATATAAATATATATTTATAAATAAATATATATAAATATATATTTATAAATAAATATATATTTATAAATAAATATAAATAAATATATATTTATAAATAAATATAAATAAATATATATTTATAAATAAATATAAATAAATATATATTTATAAATAAATATAAATAAATATATATTTATAAATAAATATAAATAAATATATATTTATAAATAAATATAAATAAATATATATTTATAAATAAATGTATATATTTATAAATAAATATATATTTATAAATAAATATAAATATATAAATAAATATAAATATTATAAATAAATTTATATTTATAAATATGTATATTTATAAATATAAATATATAAATATGTGTATTTATAAATATGTATATTTATAAATATAAATATAAAATATATAAATATATACTTATAAATATAAATATAAATATATAAATATATATTTATAAATATAAATATATATATTTATAAATATATATATATTTATAAATATAAATATATATATTTATAAATATAAATATATATATTTATAAATATATATTTATAAATATAAATATATATTTATAAATATATATTTATAAATATAAATATATATTTATAAATATATATTTATAAATATAAATATATATATTTATAAATATATATAAATATATTTATAAATATATATATTTATAAATATATATAAATATATTTATAAATATATATATTTATAAATATATATAAATATATTTATAAATATAAATATATGTTTATAAATATAAATATATATATTTATATATAAATATATATATTTATAAATATATATATTTATATATAAATATATATATTTATAAATATATATTTATATTTAAATATAAATATAAATATATATATTTAATTATTATATATATATTTAAATATAAATATATATTTATAAAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5098:HG3_PB_pbsv_6783:HG2_PB_pbsv_6979:HG4_PB_pbsv_6988:HG2_PB_SVrefine2Falcon1plusDovetail_10280:HG4_PB_SVrefine2Falcon1Dovetail_4216:HG3_PB_SVrefine2Falcon1Dovetail_4215:HG2_PB_SVrefine2Falcon2Bionano_3503:HG2_PB_SVrefine2PBcRplusDovetail_9567;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5098:HG2_PB_SVrefine2PBcRplusDovetail_9567;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0753932;ClusterMaxSizeDiff=0.0749306;ClusterMaxEditDist=0.237451;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=2100;DistBack=9540;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=124;REFWIDENED=6:68511986-68512109;PctSeqSimilarity=0.9812;PctSizeSimilarity=0.9976;PctRecOverlap=0.876;SizeDiff=-5;StartDistance=-259;EndDistance=-259;GTMatch=0;TruScore=95;MatchId=4693.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:57:1/1:2:26:2:10:./.:0:0:0:0:1/1:0:23:0/1:21:142:.:2227:.
chr6	69642768	HG2_PB_SVrefine2Falcon1plusDovetail_10282	T	TAAGAATTACTTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCTACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3214:HG4_PB_pbsv_6992:HG4_PB_HySA_10302:HG3_PB_pbsv_6787:HG3_PB_HySA_10710:HG2_PB_pbsv_6985:HG3_PB_assemblyticsfalcon_23078:HG4_PB_assemblyticsfalcon_22600:HG4_PB_SVrefine2PBcRDovetail_3449:HG2_Ill_breakscan11_3706:HG2_PB_SVrefine2Falcon2Bionano_3505:HG3_PB_SVrefine2Falcon1Dovetail_4216:HG4_PB_SVrefine2Falcon1Dovetail_4217:HG2_PB_SVrefine2Falcon1plusDovetail_10282;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10282:HG4_PB_SVrefine2Falcon1Dovetail_4217;NumExactMatchSVs=2;ClusterMaxShiftDist=0.148368;ClusterMaxSizeDiff=0.148368;ClusterMaxEditDist=0.236131;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=331;DistBack=9708;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=6:69642769-69642782;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:29:./.:26:6:4:11:./.:0:0:0:0:0/1:31:7:0/1:5:34:.:.:.
chr6	69771671	HG2_Ill_GATKHC_11662	A	AAAGTCTATGTACTGTATGCTTCTATTAAAATGAAATTTTAGAAAAGGCAGAATTAT	20	PASS	ClusterIDs=HG3_PB_pbsv_6788:HG4_Ill_svaba_9108:HG2_PB_pbsv_6987:HG4_PB_pbsv_6993:HG4_Ill_manta_1746:HG4_Ill_Krunchall_10386:HG4_Ill_GATKHC_11723:HG4_Ill_GATKHCSBGrefine_4940:HG4_Ill_Cortex_3182:HG4_Ill_250bpfermikitraw_9794:HG4_Ill_150bpfermikitraw_9390:HG3_Ill_svaba_9105:HG3_Ill_manta_1659:HG3_Ill_Spiral_7676:HG3_Ill_Krunchall_9818:HG3_Ill_GATKHC_11632:HG3_Ill_GATKHCSBGrefine_4816:HG3_Ill_Cortex_3206:HG3_Ill_250bpfermikitraw_9465:HG3_Ill_150bpfermikitraw_9242:HG2_Ill_svaba_9017:HG2_Ill_manta_2012:HG2_Ill_SpiralSDKrefine_14766:HG2_Ill_Krunchall_10063:HG2_Ill_GATKHC_11662:HG2_Ill_GATKHCSBGrefine_4877:HG2_Ill_Cortex_7772:HG2_Ill_250bpfermikitraw_9774:HG2_Ill_150bpfermikitraw_9178:HG2_PB_HySA_12896:HG3_PB_HySA_10712;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9178:HG2_Ill_250bpfermikitraw_9774:HG2_Ill_Cortex_7772:HG2_Ill_GATKHCSBGrefine_4877:HG2_Ill_GATKHC_11662:HG2_Ill_Krunchall_10063:HG2_Ill_SpiralSDKrefine_14766:HG2_Ill_manta_2012:HG2_Ill_svaba_9017:HG3_Ill_150bpfermikitraw_9242:HG3_Ill_250bpfermikitraw_9465:HG3_Ill_Cortex_3206:HG3_Ill_GATKHCSBGrefine_4816:HG3_Ill_GATKHC_11632:HG3_Ill_Krunchall_9818:HG3_Ill_Spiral_7676:HG3_Ill_manta_1659:HG3_Ill_svaba_9105:HG4_Ill_150bpfermikitraw_9390:HG4_Ill_250bpfermikitraw_9794:HG4_Ill_Cortex_3182:HG4_Ill_GATKHCSBGrefine_4940:HG4_Ill_GATKHC_11723:HG4_Ill_Krunchall_10386:HG4_Ill_manta_1746:HG4_Ill_svaba_9108;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.273504;PBcalls=5;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=18446;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=6:69771666-69771673;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:31:0|1:38:1:2:28:./.:0:0:0:0:0/1:28:26:./.:.:.:.:.:.
chr6	69831910	HG4_Ill_150bpfermikitraw_9391	A	AGCCAGGCAGAGGCGCTCCTCACTTCCCAGACAGGGCAGCCGGGCAGAGGGGCTCCCCACAACCCATACGATGGGTG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25939:HG2_PB_assemblyticsPBcR_22429:HG4_PB_assemblyticsfalcon_22604:HG4_PB_pbsv_6995:HG3_PB_HySA_10713:HG2_PB_pbsv_6989:HG4_PB_HySA_10308:HG2_PB_HySA_12899:HG3_PB_pbsv_6790:HG3_Ill_manta_1660:HG3_Ill_Spiral_7677:HG3_Ill_Krunchall_9819:HG3_Ill_GATKHCSBGrefine_4817:HG3_Ill_150bpfermikitraw_9243:HG3_PB_assemblyticsfalcon_23082:HG4_Ill_manta_1747:HG4_Ill_Krunchall_10387:HG4_Ill_GATKHCSBGrefine_4943:HG4_Ill_250bpfermikitraw_9795:HG4_Ill_150bpfermikitraw_9391:HG2_Ill_manta_2013:HG2_Ill_Krunchall_10064:HG2_Ill_GATKHC_11664:HG2_Ill_GATKHCSBGrefine_4879:HG2_Ill_250bpfermikitraw_9775:HG2_PB_PB10Xdip_25940;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9775:HG2_Ill_GATKHCSBGrefine_4879:HG2_Ill_GATKHC_11664:HG2_Ill_Krunchall_10064:HG2_Ill_manta_2013:HG4_Ill_150bpfermikitraw_9391:HG4_Ill_250bpfermikitraw_9795:HG4_Ill_GATKHCSBGrefine_4943:HG4_Ill_Krunchall_10387:HG4_Ill_manta_1747;NumExactMatchSVs=10;ClusterMaxShiftDist=0.1125;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.294479;PBcalls=11;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=-33;DistForward=15;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=11;REFWIDENED=6:69831909-69831922;PctSeqSimilarity=0.9935;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4697.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:1:15:2:22:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr6	70526345	HG4_Ill_250bpfermikitraw_9806	T	TTTGTATACTATGACATGAATATATCTCAAACCAAGAAGTTTGTGGGTAGTGGATGAGACA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3707:HG2_PB_HySA_12919:HG3_PB_pbsv_6796:HG3_PB_assemblyticsfalcon_23089:HG4_Ill_svaba_9118:HG4_Ill_manta_1748:HG4_Ill_Krunchall_10400:HG4_Ill_GATKHC_11736:HG4_Ill_GATKHCSBGrefine_4947:HG4_Ill_Cortex_3184:HG4_Ill_250bpfermikitraw_9806:HG4_Ill_150bpfermikitraw_9401:HG3_Ill_svaba_9112:HG3_Ill_scalpel_7030:HG3_Ill_manta_1661:HG3_Ill_Spiral_7683:HG3_Ill_Krunchall_9827:HG3_Ill_GATKHC_11640:HG3_Ill_GATKHCSBGrefine_4822:HG3_Ill_Cortex_3207:HG3_Ill_250bpfermikitraw_9470:HG3_Ill_150bpfermikitraw_9249:HG2_Ill_svaba_9026:HG2_Ill_manta_2014:HG2_Ill_SpiralSDKrefine_14773:HG2_Ill_Krunchall_10072:HG2_Ill_GATKHC_11673:HG2_Ill_GATKHCSBGrefine_4883:HG2_Ill_Cortex_7775:HG2_Ill_250bpfermikitraw_9781:HG2_Ill_150bpfermikitraw_9188:HG4_PB_assemblyticsfalcon_22612:HG2_PB_pbsv_6994;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9188:HG2_Ill_250bpfermikitraw_9781:HG2_Ill_Cortex_7775:HG2_Ill_GATKHCSBGrefine_4883:HG2_Ill_GATKHC_11673:HG2_Ill_Krunchall_10072:HG2_Ill_SpiralSDKrefine_14773:HG2_Ill_manta_2014:HG2_Ill_svaba_9026:HG3_Ill_150bpfermikitraw_9249:HG3_Ill_250bpfermikitraw_9470:HG3_Ill_Cortex_3207:HG3_Ill_GATKHCSBGrefine_4822:HG3_Ill_GATKHC_11640:HG3_Ill_Krunchall_9827:HG3_Ill_Spiral_7683:HG3_Ill_manta_1661:HG3_Ill_scalpel_7030:HG3_Ill_svaba_9112:HG4_Ill_150bpfermikitraw_9401:HG4_Ill_250bpfermikitraw_9806:HG4_Ill_Cortex_3184:HG4_Ill_GATKHCSBGrefine_4947:HG4_Ill_GATKHC_11736:HG4_Ill_Krunchall_10400:HG4_Ill_manta_1748:HG4_Ill_svaba_9118;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.208;PBcalls=5;Illcalls=28;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=27;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=-1;DistForward=6445;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=6:70526344-70526346;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4698.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:53:0|1:37:8:2:38:./.:0:0:0:0:0/1:27:39:./.:.:.:.:.:.
chr6	72026131	HG2_PB_SVrefine2Falcon1plusDovetail_10288	T	TATATGTATATATACATATATACACACATATATGTATATATACATATATACACACATATATGTATATATACATATATACACACATATATGTATATATACATATATATACAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4224:HG3_PB_assemblyticsfalcon_23096:HG2_PB_pbsv_6998:HG2_PB_assemblyticsPBcR_22450:HG4_PB_SVrefine2PBcRDovetail_3456:HG2_PB_SVrefine2PBcRplusDovetail_9575:HG2_PB_SVrefine2PB10Xhap12_5108:HG2_PB_SVrefine2Falcon2Bionano_3511:HG2_PB_SVrefine2Falcon1plusDovetail_10288:HG3_PB_pbsv_6798:HG4_PB_SVrefine2Falcon1Dovetail_4224;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10288:HG2_PB_SVrefine2Falcon2Bionano_3511:HG2_PB_SVrefine2PB10Xhap12_5108:HG2_PB_SVrefine2PBcRplusDovetail_9575:HG4_PB_SVrefine2PBcRDovetail_3456;NumExactMatchSVs=5;ClusterMaxShiftDist=0.192982;ClusterMaxSizeDiff=0.192982;ClusterMaxEditDist=0.338028;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=110;DistBack=-1;DistForward=50535;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=218;REFWIDENED=6:72026028-72026245;PctSeqSimilarity=0.9576;PctSizeSimilarity=0.8594;PctRecOverlap=0.124;SizeDiff=-18;StartDistance=104;EndDistance=104;GTMatch=0;TruScore=64;MatchId=4699.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:75:1/1:2:29:2:13:./.:0:0:0:0:./.:3:50:./.:.:.:.:.:.
chr6	72429383	HG2_Ill_GATKHC_11694	T	TCACTGCAGCCTCTGCCTCCTGGGTTCAAATGATTCTCCTAGCTACTTGGGAGGCCGAGGCAGGAGAATCATTTGAACCCAGGAGGCAGAGGCTGCAGTGAGCTGAGATCATGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3708:HG4_PB_pbsv_7009:HG2_PB_pbsv_7001:HG4_PB_assemblyticsfalcon_22628:HG2_PB_assemblyticsPBcR_22459:HG2_PB_PB10Xdip_25976:HG3_PB_pbsv_6801:HG2_PB_PB10Xdip_25975:HG4_Ill_SVrefine2DISCOVARDovetail_5176:HG4_Ill_MetaSV_4550:HG4_Ill_GATKHCSBGrefine_4952:HG3_Ill_SVrefine2DISCOVARDovetail_5300:HG3_Ill_MetaSV_4551:HG3_Ill_GATKHC_11656:HG3_Ill_GATKHCSBGrefine_4826:HG4_PB_SVrefine2PBcRDovetail_3458:HG4_PB_SVrefine2Falcon1Dovetail_4226:HG3_PB_SVrefine2PBcRDovetail_3221:HG3_Ill_Spiral_7694:HG2_PB_SVrefine2PBcRplusDovetail_9577:HG2_PB_SVrefine2PB10Xhap12_5110:HG2_PB_SVrefine2Falcon2Bionano_3513:HG2_PB_SVrefine2Falcon1plusDovetail_10290:HG2_Ill_SVrefine2DISCOVARplusDovetail_11235:HG2_Ill_MetaSV_4368:HG2_Ill_GATKHC_11694:HG2_Ill_GATKHCSBGrefine_4886:HG2_10X_SVrefine210Xhap12_5002:HG3_PB_SVrefine2Falcon1Dovetail_4226:HG3_PB_assemblyticsfalcon_23104:HG4_PB_HySA_10345:HG2_PB_HySA_12945:HG3_PB_HySA_10732;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5002:HG2_Ill_GATKHCSBGrefine_4886:HG2_Ill_GATKHC_11694:HG2_Ill_MetaSV_4368:HG2_Ill_SVrefine2DISCOVARplusDovetail_11235:HG2_PB_SVrefine2Falcon1plusDovetail_10290:HG2_PB_SVrefine2Falcon2Bionano_3513:HG2_PB_SVrefine2PB10Xhap12_5110:HG2_PB_SVrefine2PBcRplusDovetail_9577:HG3_Ill_Spiral_7694:HG3_PB_SVrefine2PBcRDovetail_3221:HG4_PB_SVrefine2Falcon1Dovetail_4226:HG4_PB_SVrefine2PBcRDovetail_3458;NumExactMatchSVs=13;ClusterMaxShiftDist=0.16;ClusterMaxSizeDiff=0.16;ClusterMaxEditDist=0.248889;PBcalls=19;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=113;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=6:72429384-72429390;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4700.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:2:103:1/1:0:42:2:46:./.:0:0:0:0:0/1:31:29:./.:.:.:.:.:.
chr6	72580491	HG2_PB_HySA_12947	T	TTTGAGTCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTTCTCATACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGATG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3709:HG2_PB_pbsv_7003:HG2_PB_HySA_12947:HG3_PB_SVrefine2PBcRDovetail_3223:HG3_PB_assemblyticsfalcon_23106:HG4_PB_assemblyticsfalcon_22630:HG2_PB_SVrefine2Falcon1plusDovetail_10292:HG3_PB_pbsv_6803:HG3_PB_SVrefine2Falcon1Dovetail_4228:HG4_PB_SVrefine2Falcon1Dovetail_4228;NumClusterSVs=10;ExactMatchIDs=HG2_PB_HySA_12947;NumExactMatchSVs=1;ClusterMaxShiftDist=0.138801;ClusterMaxSizeDiff=0.138801;ClusterMaxEditDist=0.223975;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=323;DistBack=-5;DistForward=4974;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:72580492-72580491;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9845;PctRecOverlap=0.9598;SizeDiff=5;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=97;MatchId=4701.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:51:0|1:39:3:3:36:./.:0:0:0:0:0/1:29:7:0/1:10:38:.:.:.
chr6	74216637	HG3_Ill_GATKHCSBGrefine_4834	C	CCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGACTGGGATTATAGATGTGAGCCACCGCACCCGGCAATACCCTATGCTTTTATGCCAAAGAGAAAGCATGTAATTATTTTGACCTAGGCCTTAATTTTGACTGTCACTGACCAAAATCAACATTTTCCAAACTGCTGGCTGCAATTCATTAGTAAGTCATGAAATTTTTTGTCATGGGTAGTAAATACTATCCTTGGAAATTTTTGTTGCATTATTATTATTTTTTTTTCCTCTTTGAGACAGGGTCTTGGTCTGTCACCCAGGTTGGAGCACAGTGGCATGATCATAGCCCACGGTAACCTTGAACTCCTGGCCTGAAGCAATCCTCCCACTCAGCCTCCCAAAGCGATGGGATTACAGGCATGAGCCACCATGCCCAGCTTGTTTCAGTAACTCACACGCAAATTATATTCACCAATTTTTTTTTTTTTTGAGATGGCGTCTTGCTCTATCACCCAGGCTGGAGTACAGTATTGCGGTCTTAGCTCACTGCAACCTCAGCCTCCCAGGTTCAAGCAATTCTGCCTCAGCCTCCTGAGTAGGTGGGATTACAGGCGCACGGCTGTAATCCACCATGCCCGGATAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACAAAGTTGGCCAGGCTGGTCTCGAACTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10296:HG4_PB_pbsv_7015:HG3_PB_pbsv_6811:HG2_PB_pbsv_7011:HG4_PB_HySA_10358:HG2_PB_PB10Xdip_25988:HG2_PB_PB10Xdip_25987:HG4_Ill_MetaSV_4555:HG4_Ill_GATKHCSBGrefine_4959:HG3_Ill_MetaSV_4559:HG3_Ill_GATKHCSBGrefine_4834:HG2_Ill_GATKHCSBGrefine_4892:HG2_Ill_MetaSV_4373:HG3_PB_SVrefine2Falcon1Dovetail_4232:HG4_PB_SVrefine2Falcon1Dovetail_4233:HG3_Ill_SVrefine2DISCOVARDovetail_5312:HG2_Ill_SVrefine2DISCOVARplusDovetail_11242:HG3_PB_SVrefine2PBcRDovetail_3228:HG4_PB_SVrefine2PBcRDovetail_3462:HG2_10X_SVrefine210Xhap12_5009:HG2_PB_SVrefine2PBcRplusDovetail_9583:HG2_PB_SVrefine2PB10Xhap12_5120:HG2_PB_SVrefine2Falcon2Bionano_3514;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4892:HG3_Ill_GATKHCSBGrefine_4834:HG3_Ill_MetaSV_4559:HG4_Ill_GATKHCSBGrefine_4959:HG4_Ill_MetaSV_4555;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0660576;ClusterMaxSizeDiff=0.0660576;ClusterMaxEditDist=0.201102;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=696;DistBack=58;DistForward=17956;DistMin=58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=301;REFWIDENED=6:74216415-74216715;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:1/1:0:55:0:7:./.:0:0:0:0:1/1:0:25:1/1:4:120:.:.:.
chr6	74295003	HG2_PB_PB10Xdip_25997	CAA	AAAACAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCGCCACTACGCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCGTTTTTAGCCGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCGGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4234:HG2_Ill_breakscan11_3710:HG2_PB_pbsv_7015:HG3_PB_pbsv_6815:HG3_PB_HySA_10753:HG2_PB_HySA_12970:HG2_PB_PB10Xdip_25997:HG2_PB_SVrefine2PB10Xhap12_5123;NumClusterSVs=8;ExactMatchIDs=HG2_PB_PB10Xdip_25997;NumExactMatchSVs=1;ClusterMaxShiftDist=0.157729;ClusterMaxSizeDiff=0.15142;ClusterMaxEditDist=0.282707;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=-12;DistForward=10621;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=309;REFWIDENED=6:74294698-74295006;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9663;PctRecOverlap=0.9694;SizeDiff=-11;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4704.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:37:0|1:17:1:2:29:./.:0:0:0:0:0/1:22:12:0/1:8:25:.:.:.
chr6	74341731	HG3_PB_SVrefine2Falcon1Dovetail_4236	T	TAAGAATGCAGTCTGGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAGCCGGGCGCGGTGGCGGGCGCTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_10755:HG3_PB_pbsv_6819:HG2_PB_HySA_12973:HG2_PB_pbsv_7018:HG3_PB_SVrefine2Falcon1Dovetail_4236:HG2_PB_SVrefine2Falcon1plusDovetail_10300:HG2_PB_assemblyticsfalcon_23250:HG2_Ill_breakscan11_3711;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_4236;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0589102;ClusterMaxSizeDiff=0.0559647;ClusterMaxEditDist=0.244253;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=334;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=6:74341732-74341749;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.9911;PctRecOverlap=0.9941;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4705.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:0|1:33:1:1:25:./.:0:0:0:0:0/1:15:7:0/1:6:27:.:.:.
chr6	74504847	HG3_PB_pbsv_6821	T	TTTTTCTGGGCGGGCGTGGTGGCTCACGCCTGTATCCCAGCACTTTGGGAGGCCGAGGGCGGGCGGATCACGCAGAGTCAGGAGATCGAGGACCATACCCGGCTAAAAATGGTGAAACCCCCGTCTCTACTACAAAATACAAAAAATTAGCCCGGGCGTAGATGGCGGGCGGCTGTAGTCCCAGCTACTGGGAGGCTTGAGGCGCGGTGAGCGAATGGCGTGGAACCCGGGGGCGGAGCTTTGCAGTGACGGAGATCCCGCACTGCACTCCCAGCCTGGGCGACAGAGCGAGACTCCGTTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTTAG	20	PASS	ClusterIDs=HG3_PB_HySA_10763:HG2_PB_pbsv_7020:HG3_PB_pbsv_6821:HG3_PB_HySA_10764:HG4_PB_assemblyticsfalcon_22656:HG2_PB_assemblyticsfalcon_23257:HG2_Ill_breakscan11_3712:HG4_PB_SVrefine2Falcon1Dovetail_4237:HG2_PB_SVrefine2Falcon1plusDovetail_10302:HG3_Ill_SVrefine2DISCOVARDovetail_5315:HG2_PB_SVrefine2Falcon2Bionano_3518;NumClusterSVs=11;ExactMatchIDs=HG3_PB_pbsv_6821;NumExactMatchSVs=1;ClusterMaxShiftDist=0.165165;ClusterMaxSizeDiff=0.165165;ClusterMaxEditDist=0.192192;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=340;DistBack=3959;DistForward=44534;DistMin=3959;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=6:74504838-74504855;PctSeqSimilarity=0.9401;PctSizeSimilarity=0.9971;PctRecOverlap=0.9677;SizeDiff=1;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=96;MatchId=4706.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:0|1:28:1:0:25:./.:0:0:0:0:0/1:37:8:0/1:9:14:.:.:.
chr6	74668007	HG2_Ill_MetaSV_4376	G	GCCACATTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATTTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9589:HG4_PB_assemblyticsfalcon_22659:HG4_PB_pbsv_7020:HG2_PB_HySA_12981:HG3_PB_pbsv_6823:HG4_PB_SVrefine2Falcon1Dovetail_4239:HG2_PB_PB10Xdip_26004:HG2_PB_assemblyticsPBcR_22489:HG2_PB_assemblyticsfalcon_23258:HG4_Ill_GATKHCSBGrefine_4962:HG2_PB_SVrefine2PB10Xhap12_5128:HG2_Ill_MetaSV_4376:HG3_PB_SVrefine2Falcon1Dovetail_4238:HG2_PB_HySA_12980:HG2_PB_pbsv_7022;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_MetaSV_4376:HG4_Ill_GATKHCSBGrefine_4962;NumExactMatchSVs=2;ClusterMaxShiftDist=0.236301;ClusterMaxSizeDiff=0.236301;ClusterMaxEditDist=0.27931;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=43256;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=6:74668008-74668019;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:36:./.:20:9:6:26:./.:0:0:0:0:0/1:26:10:0/1:6:35:.:.:.
chr6	74872582	HG2_Ill_SVrefine2DISCOVARplusDovetail_11246	T	TATATATAAATATATATATATATAAATATATATATAAATATATATATATAAATATATAAATATATATATTAATATATATATAAATATATATATATATTA	20	PASS	ClusterIDs=HG2_PB_pbsv_7025:HG2_PB_SVrefine2Falcon2Bionano_3521:HG4_PB_SVrefine2Falcon1Dovetail_4241:HG3_Ill_SVrefine2DISCOVARDovetail_5317:HG3_Ill_250bpfermikitraw_9519:HG3_Ill_150bpfermikitraw_9292:HG2_Ill_SVrefine2DISCOVARplusDovetail_11246:HG2_Ill_150bpfermikitraw_9232:HG3_Ill_GATKHC_11691:HG3_Ill_GATKHCSBGrefine_4838:HG2_Ill_GATKHC_11722:HG2_Ill_GATKHCSBGrefine_4896;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9232:HG2_Ill_SVrefine2DISCOVARplusDovetail_11246:HG3_Ill_150bpfermikitraw_9292:HG3_Ill_250bpfermikitraw_9519:HG3_Ill_SVrefine2DISCOVARDovetail_5317;NumExactMatchSVs=5;ClusterMaxShiftDist=0.103093;ClusterMaxSizeDiff=0.0732984;ClusterMaxEditDist=0.26455;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=98;DistBack=19;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=46;REFWIDENED=6:74872560-74872605;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4708.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:23:./.:12:4:3:18:./.:0:0:0:0:0/1:9:11:./.:.:.:2086:.:.
chr6	75162143	HG2_PB_pbsv_7027	T	TAAAATCCGTCCGGGCGCGGTGGCTCACGCCTCGGTATTCCCAGCACTTTGGGAGGCCGAGCGGGTGGACTCATGAGGTCAGGAGATCGAGACCCATCCTGGCTAACATAGGTGGAAAACCCCGTCTCCTACTAAAAATACAAATATTAGCCGGGCGCGTGTGGCGGGGCGCCTGTTAGTCCAGCTACTCGGGAGGCTGAGGCAGGAGAAATTGGCTTTGAAACCCGGGAGGGCGGCAGCCTTGGAGCTGAGCCGAGATTCTCGCCACTGGCAGTCCGCATCCGGCCTGGGCGACAGATGCGAGAGCTCCGTCTCAAAAAAAAAGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_6827:HG2_PB_SVrefine2Falcon1plusDovetail_10306:HG2_PB_assemblyticsfalcon_23265:HG2_PB_pbsv_7027:HG3_PB_SVrefine2Falcon1Dovetail_4241:HG3_PB_SVrefine2PBcRDovetail_3233:HG2_PB_HySA_12986:HG2_Ill_breakscan11_3713;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_7027;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0687679;ClusterMaxSizeDiff=0.0515759;ClusterMaxEditDist=0.218487;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=357;DistBack=13815;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=6:75162144-75162147;PctSeqSimilarity=0.9379;PctSizeSimilarity=0.9776;PctRecOverlap=0.9776;SizeDiff=8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=4709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:27:./.:5:3:1:4:./.:0:0:0:0:./.:36:2:0/1:13:17:.:.:.
chr6	75759153	HG4_Ill_GATKHCSBGrefine_4968	A	AGGAGGGGAGAGGAGGGGAGAGGAGAGGAGAGGAGGGGAGAGGAGGGGAGAGGAGAGGAGAGGAGAGAGGAAAGAGGAAAGGAAAGGGGAAAGGAAGGGAAGAGGAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5021:HG4_PB_assemblyticsfalcon_22665:HG3_PB_SVrefine2Falcon1Dovetail_4243:HG4_PB_SVrefine2Falcon1Dovetail_4243:HG4_PB_pbsv_7025:HG2_PB_assemblyticsfalcon_23267:HG2_PB_SVrefine2Falcon1plusDovetail_10307:HG3_PB_pbsv_6828:HG4_PB_HySA_10369:HG2_PB_HySA_12989:HG3_PB_HySA_10768:HG4_Ill_MetaSV_4563:HG4_Ill_GATKHC_11782:HG4_Ill_GATKHCSBGrefine_4968:HG3_Ill_SVrefine2DISCOVARDovetail_5322:HG3_Ill_GATKHC_11698:HG3_Ill_GATKHCSBGrefine_4843:HG3_Ill_250bpfermikitraw_9526:HG2_Ill_GATKHC_11731:HG2_Ill_GATKHCSBGrefine_4901:HG2_10X_SVrefine210Xhap12_5022:HG2_PB_PB10Xdip_26069:HG2_PB_PB10Xdip_26070:HG4_PB_HySA_10368:HG4_PB_SVrefine2PBcRDovetail_3468:HG4_Ill_SVrefine2DISCOVARDovetail_5193:HG2_PB_SVrefine2PBcRplusDovetail_9593:HG2_PB_SVrefine2PB10Xhap12_5132:HG2_PB_SVrefine2Falcon2Bionano_3523:HG2_Ill_SVrefine2DISCOVARplusDovetail_11248;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5022:HG2_Ill_GATKHCSBGrefine_4901:HG2_Ill_GATKHC_11731:HG3_Ill_250bpfermikitraw_9526:HG3_Ill_GATKHCSBGrefine_4843:HG3_Ill_GATKHC_11698:HG3_Ill_SVrefine2DISCOVARDovetail_5322:HG4_Ill_GATKHCSBGrefine_4968:HG4_Ill_GATKHC_11782:HG4_Ill_MetaSV_4563;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0747664;ClusterMaxSizeDiff=0.0747664;ClusterMaxEditDist=0.224299;PBcalls=17;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=106;DistBack=20;DistForward=28;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=84;REFWIDENED=6:75759110-75759193;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4710.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:74:1/1:1:6:6:42:./.:0:0:0:0:1/1:1:29:./.:.:.:.:.:.
chr6	77980646	HG2_PB_SVrefine2PBcRplusDovetail_9601	GACT	TTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTAGAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAA	20	PASS	ClusterIDs=HG3_PB_pbsv_6838:HG4_PB_assemblyticsfalcon_22682:HG3_PB_HySA_10788:HG4_PB_HySA_10386:HG2_PB_HySA_13018:HG4_PB_SVrefine2Falcon1Dovetail_4247:HG2_PB_SVrefine2PB10Xhap12_5142:HG2_PB_assemblyticsfalcon_23290:HG2_PB_SVrefine2Falcon1plusDovetail_10315:HG2_PB_SVrefine2Falcon2Bionano_3532:HG4_PB_SVrefine2PBcRDovetail_3473:HG2_PB_assemblyticsPBcR_22523:HG2_PB_SVrefine2PBcRplusDovetail_9601:HG2_10X_SVrefine210Xhap12_5032:HG3_PB_assemblyticsfalcon_23164:HG3_PB_SVrefine2Falcon1Dovetail_4251:HG4_Ill_MetaSV_4568:HG2_Ill_MetaSV_4385:HG3_PB_HySA_10787:HG2_PB_PB10Xdip_26076:HG2_PB_PB10Xdip_26075:HG4_PB_pbsv_7035;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5032:HG2_PB_SVrefine2PBcRplusDovetail_9601:HG2_PB_assemblyticsPBcR_22523:HG4_PB_SVrefine2PBcRDovetail_3473;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0991536;ClusterMaxSizeDiff=0.0991536;ClusterMaxEditDist=0.191031;PBcalls=19;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=808;DistBack=-1;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:77980650-77980645;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9988;PctRecOverlap=0.9951;SizeDiff=-1;StartDistance=1;EndDistance=4;GTMatch=0;TruScore=99;MatchId=4711.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:1:22:1:11:./.:0:0:0:0:1/1:0:27:1/1:7:263:.:.:.
chr6	78364254	HG3_Ill_MetaSV_4569	T	TAAAAAATTGAAAACAATGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_10791:HG2_PB_assemblyticsfalcon_23296:HG2_PB_pbsv_7042:HG3_PB_pbsv_6841:HG2_Ill_breakscan11_3714:HG3_Ill_MetaSV_4569:HG2_PB_SVrefine2Falcon2Bionano_3534:HG2_PB_SVrefine2Falcon1plusDovetail_10316:HG3_PB_SVrefine2PBcRDovetail_3241;NumClusterSVs=9;ExactMatchIDs=HG3_Ill_MetaSV_4569;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0583468;ClusterMaxSizeDiff=0.0551053;ClusterMaxEditDist=0.170144;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=308;DistBack=9;DistForward=24016;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=6:78364255-78364271;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9935;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4712.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:44:0|1:34:2:0:25:./.:0:0:0:0:0/1:37:16:0/1:8:24:.:.:.
chr6	78416767	HG2_PB_pbsv_7043	G	GGGGGGCGTGCGCGGTGGCTCACGCCTGTGAATCCCAGCACTTGGGAGCCGAGGCGGGGCGGATCACGAGGGTCAGGAATGCGATGGACCATTCCCTGCGCCTAACACGGGGTGAAACCCCTCTCTACTAAAATCACAAAAAAATTAGGGGCGTTGTCCGGTGGCGGGCGCTGCTCGGTCCCAGCTACCGAGGCTGAGCAGGAAGAATGGCTTGTATGAACCCGGGAGGCGAGCTTGCATGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACTCCGGGCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAGTGCGGCAAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9604:HG3_PB_pbsv_6842:HG2_PB_SVrefine2Falcon2Bionano_3535:HG2_PB_pbsv_7043:HG3_PB_SVrefine2Falcon1Dovetail_4253:HG2_PB_SVrefine2Falcon1plusDovetail_10317;NumClusterSVs=6;ExactMatchIDs=HG2_PB_pbsv_7043;NumExactMatchSVs=1;ClusterMaxShiftDist=0.103125;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.208955;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=333;DistBack=3542;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:78416754-78416769;PctSeqSimilarity=0.9271;PctSizeSimilarity=0.97;PctRecOverlap=0.9429;SizeDiff=10;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=94;MatchId=4713.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:39:./.:15:13:16:12:./.:0:0:0:0:0/1:29:15:0/1:6:14:.:.:.
chr6	80084902	HG4_Ill_SVrefine2DISCOVARDovetail_5208	A	AAGTAACTTCAAAGTCCTATGAGACCTTAAGGGGAGAGTAATTAATTTTGTTTTGGAAATTGGGAAAGGCTTCAAGGGGGATATAATGTTGAAACAAGTGCAGTTTCAATTTTTAAAAAGCCAAGCAGATGTTTTTTTAACATATAAATACAGCAGCATGATATTTCTTTTCTGAACATTAAAAAATATCTTTTTAAGGCTTGTTTAAAATAATATTTCTACAAAATAAACGTCTCACTTCCCATTTTCTCCAACTGAGATAACAAAGTCTTCCTTTTATTTTTATTCACTGCTTTGTTAGTTTTTCTATTAAGCTCGTTATTTATACTTCATGATGATTTTTCCTACATCACTTAATTGGGCAGAAGCTTCTTGAAGAAATCTATGTCTACATTTCCCTCTAAAAGAATCACTTTATATTCTTGTATATAATTCTCATTATTCTCTTTTTTCTTGTTTCTCCTTTCACTTTTATTTTATTATCTTTTTCATACTATTTCAGTACTAACCATAGAAAACTGGGAACAATAGTACACACTGACAACTTTATATATATTTTCTTTCTATACATGCTTCCTCTGCATAAAGACACTGATTACAAATACTATAATTTTCATTTACAAAGAAAAGCTGGGGTTAAGGTATTTTCCAAGGATACAGAGGCACCTGTGATGAATATGGAAACAAAATCTCCTAGGTCAGTGGTCATTAGATCAATTGTTCAACATTTTAAATGTTGTCCTAGATTTGATGCCAGTTCCTCGACAATAGGTTTTGAAAAGAGGGTTCATGATCTGAGATCCCGAAAAGGAAAAAGTTAAAAGGAAGAGAATCTTAGAGGATTAGATTGATCTCTAGGGATTTGGAAACTAGGCAGAAGATCTGAAGATGAAAGGAAAGATTTGATTCTGTGCTAAATTACAAGTTTTGAAGGAAATTAGAGTGTAATTTTGTTCAGCTATAGATAAGAATCCACAGCCTAAATTAGTAAAGTTCTTATAACTATTATCTTTTAAATCATAATTAAAAAGTATTTCTAAAACGATGTCAGTTGTGAACAATCACCTTGAGGTACAAGCGTAATATGAAAAGTCTGAGAAAGCACAGCAGTAGCAACCAGTGCATATTAAATATCAGTTGCAAAAGGGCAAGTCCAAAAGACATGTCATTACCTTACTGTATATCTTTTCTTCTCAGTCACGAAAAGAGGGAAAGGCATATAGCACTGCTGTCATGCCTTGTTTATTTTGGCCTCACGAAAGCATCAAAGTTCTGCTTTTTGGGGGAGCTGGTAGGGTGCCTTAGATTCTTCTCGCCCTACTCCTGAGAGGAAAGCTACGTTTAAACAGGCCCCAAAGAGCAAAATTTTGTTATCCTCCTGGAACCATTTATTATACTTGACCCTGACTCAGTCACTGGTAATACCCTCAGCCCAGGTTAAATAAACTTGGCATATAGGCTAAGCCAATTAGTGTGTTGCTGTCCACTGGTTAGAGTTTCCAGGAACAATCAGTTCTGCTGGGAAAAAAGAGCATGGTTTTTCTTCCATTACCAAATAAATACTTGATTAACCTGATTTCCAAGTGAATACCTGATTTCTCTCAGAAATATGCTTGTAGAAAGTTAGAGTGGGCCAGTGGTAAAAATAGAGAATTAAACACACATACTCAACTCTACATTCTCCCAGAAACTCTCAAACAACTGCCAAGGGATTGAAGGGAAGAGAAAGTGGTGGGGGAAATGGAAATGCTACAGGGCAAAGGGATGAGAGGGGAGAAGGTAGTGGAATCTGAATGGTGGATGGTTGTGTGGTAACTGATTTAGCAGATCCATGAAATCTGAATAAAGCCATTAGTGAGAAAAATTTAGAAGCACAATAATTGCCATTGTATAATCTGCAAAGCTTCAGGATTCTTGACCCCTGTTATTCTGGAAGTAGGATACAGGCAGAACTTAAAAAAAAAAGGATTGGATGCAAGTCTCTTTTAAAAATATCCATTTTACCTCTACTCCCTTTAGAAACCCCACTAAAATGACAGCCTAGGTTTCTGTTTGATTTGCCTTAAGGAACACACTCAAAATGACCCAAACAAAAACAACCAACTAAAGAAAAACATGTTTTTACATACTTTCTGTTAGAATCTTACTGCGTACTTTTTTTTTTTAACTATTGTAAATAGTATGCTTTGAAATTTTTCTCTAGCTGTTGCTGCTATATAAAAATGCCACTGACTTTTAGTTATTAATCTTATAACTGGTAACTTTGGCAGAAACTTAACAAATTTATTGCATTATTTCCCCAAATGATGAATTATAATAATTTGGGCAGAATTCCTTCAGGTTTCCTATTTTGTAGAAAACCATGTTATTTCTGAATAATAATAATTTACTTTCCAATCCTTATAGCATTTCTTTTTTTTCTTATTGCACTATGATATTTAATCCAATATTGAATAGCAATAGTTATATTGTGAATGATTATAATGATTCACCATTGATTATAATGTTTGCTATAAAATTTCCATGCATAACATTTTCAGGTTAAAGAAATTCATTTTTATAACTTGTCCACTGGGGTTTTGTATCAAAAATGATTATTAAATGTTATCAACTGTGTATTCTATGCCTATTAAAATAATATTTTCTCCTTTAATATATTAATGTGATACATTACTTAATAGATTTTATAATGTTAAATCTAATGTTTATAATGTTAAAATTGCATTCCTAGAGTATATCATAGTTGGTAATTATATGTCATCTTTTTTTACATTGCTGAATTCAATTTATACTTTTCCTTTTTTAGAATTTTTTTGGCAGGGCACCGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGACGCAGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAGTACAAAAATTAGCTGGGCATAGTGGCGGGCGCCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAGAAGAATCACTTGAACCCTGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCGCCATTGCACTCCAGTCTGGGAGAAAAGAGCAAAACTCCATCTCAAAAAAAGAAAAAAAGAATTTTTTTTGTTCTTGCATTAATAAGATTGGCCTGTTTTTCCCCTTTCTTTTACTCTCTTTACTTTTGATAACAAAATAAATTAAATATGTAAGCTGAATTGGAAAACCTTCTCTTTTATTCTATTAACTGGAAGTTCAGGTTTGGAGTTATCTTTCTTTGAATGTTTCTTTCAACGCTCCTGTAAAACTGTATGGATCTGCTGTTTTCCTCAAGGGAGAATTATGTACTACAGATAACCTTATGATTTTTATTTCTTGACTAATTTTGAGTCAATTTTGGTAACTTTTAAAAGTATTTTGTTCATTTCACTTAATTTTTCAAATGTGTTAACATTAAAGTTACTTATATTTTCTTGTCATTTTGATCTCAGCCGCCTCTTTAATTACACCTTCTTATTCATTCCTAATCTTTTATGCTGTCTCTTTTGTTTTCTTAATAGATCTTGCCTGACGTTTGTCAAAATCATTAGTTTTTCAGAAAATCATTTTTGGTTTTGTTGATTCAAAATTATGAAGTTTTTTACTTTATGTTTTTCTGCTCTTGTCTTTATTATTTTATTTCTTCTTACTCCTACATTTTTTGGGTTTACAGTTGTGCAATACATAATGACAATTTCAGTCAACAACAGAGTGCATATATGATGCCCTCCATAATATTATAATGAAGCTGAAAAATTCCTTTCACACAGTGACTTCTTAGCATTGTAACATAACACATTACTCACAAGTTTGTGGTGATGCTGGTGTAAACAAACCCACTTTGCTGCCAGTCATGTATGAGTATAGCACATGCAATTATGTATAGTACATAATACTTGGTGATAAAGGACTATGTTACTAGTTTATGTATTTACTATAGTACACTTTTTATTACTATTTTAGAGTGTATTCCTTCTACTTATGAAAAAAAATGTTAACTGTAAAACAGCCTCAGGTAGGTCCTTCAGGAGGTGTTCCAGAAGGCATTGTTATCACAGGAAATGACAGTTCTATGCATGTTATTGCCCTGAAAACCTTCCAATGGGACAAGATATGGAGGTGGAAGACAGTGATATTGTTCATTCTGACCCTGTATAGGCTAGACTAATGTGAATGTTTGTGTCTTAGTTAACAAAAAAGTTACAAAAGTAAACCAAAAAATTTTTGAACAGAAAAAAGCTTATAGAATAAAAACATGAAGAAAAATATGTTTGTACAACTGTACAATGTGTTTGTGTTTTAAGCTAATTGTTACTACAAAAAAGAGTAAAAAGATTAAAAATGATTTAAAAATTTATAAAGTAAAAAAGTTGCAGTAAACTAAGATTCATTTATTATTGAAGAAAAATATTTTAAAATAAATTTAGTGTAGCCTAAGTGTACTGTGTTTATAAAGTGGTATACAGTAATGTCCTAGGCCTTCACATTCACTCACCACTCACTCATTGACTCGCCCAGAGAAACTTCCAGTCCTGCAAGATCTATTCATGGTAAGTGCCCTAAACAGGTGTAGCATTTAAAAATCTTTTATACAGTATTTTTACTGTACCTTTTCTATATTTAGATATGTATAGATATACAAATACCATTGTGTTATGATTGCCTACAATATTGAGTACAGTAACATGCTGTACAGGTTGTAGCCTCTGAGCACTAGGCTATCCCATATAGCCTAGGTGTGCGTATGCTATCCCATCCAGGCTTATGTAAGTACACCTTCTGATGGTCGCACAATGACACAATTGCCTAGCAATGCATTTCTCAGCATGTATCATCATCGAGTGAAGTGGAGAATGACTGACTTTTGCTCTTCTTTTTCTAATGTCTTAAAATAACTGCTTAGGTAATCATGTTTTGATTTTTTCCTAATACAAGCATTTTAGGCTTTAAGTTTCCCTATGAAGACTACTGGCTATGTTCCAAAAGTTTTGAAGTGTTTTATTTTTATTAATGTACAGCTGCTTCTACAATTGTTATTTATGCTAAATTTTTGATTCATGGTTGCTTCTTTGCATGTGTATTAATCATTTTTATTGTGAGTTCATAATATTTTATTTGAGGCCTGCAAATAAAATACATTTCTTCATAACAATAGTACCTGGGGTATTACCAACTTTCAAACTCAACATCTAGTTTAAATTTTTTTAGGCAATATCAGTTTCAGTGGCAAAATGATGGGAATATGGCTTGTGGTTAAGACATCTCAGGGGGGACTTATTTTCTTTATTTCTGCTCCATGCAAAGAGAAGGAACATCTTTCCTGCTGTGGGTCACATTTGTCTCTTATTTACCCACTGTGAGTGACACGCTTTGAGTGGTCCTGGTTTCATGCAGGTATCTCTGATCCTACTTTCTCTCCTCTACTCTGGCACCTGTTTTGGCTTCTGTTCTTCAAACATTTGCCAATTAAAACCCAGACTTCGAGCTATAATAATTGGCAGATATTCTCAAGGATAATGCAAGCTCTAGGGCTCAGCTAATCCTCATGGAATCGTACTTTCTCATTGTTTGTTTCATCTAGTTCCATTTCTTTACTTCCAGTTCAGCAGTGTTCTGAAAAAAATTGTTATGTATTTACTTAATATTATTTTTCTTACTCCTGGAAGGATTTCTCTGCACATGTATTCTGCCATACTTTTGGAAACTAAAAACCCATTTTATGACACTTTTGGTTGAAATGTATAAAAAAAAACCCCAGATCAGTTTGCTGTAACAAACTGTAAACAGCAGAGACATAACTAGAAACCCAAGAAATATGATTTTTCTTTTTAGTTTAATTTGGCAGCTAAATCATATCCTCAAAGCCATAGATTCTTTCTGCCTCTTCATTCTGCCTGTCATATAGGCTTCAATCCAAAGCTATCTATCTCTCTGACATGGTCACAAAATGCAGCACAGAGCTGCATACTTTATGTCCACAATCAAGAAGAGAGGGAACCCTTCCCCAACCATCATATGAGTTTTCTGACTCATATGGTTCCCAATGGGCAACCACTGAACCAAATCCTATAAGAGAAATGTCATGCTTTGATTAACTTAGTCCTGGATTACTTAAAACATATTCCTTGTGTAATATCTACTTCCTTCCTGAAAATTCTGTTGCTAAGTGCAAAAAATACTTTTTCATTTTAAAAGAAAAATTGTGATGCATTTAGTCCCAACTCAAGGTACTTGATAATTTTATATAACAATTCAAATAACTTAACACAATTTTTAAAAATCCAATAATTTGAAAACAAAAATTCAAGTTTAGGCATAAAATAGAATATACTAAGGGTTTACTGATCTATTCTTTGTCTTATTTTCATACCATTTTCTTCATCACTTGTTAAAACTTTTGGGACTCTGGTGATCTTGCTCTTAAACTACACTGAAAAATTATAGCATACAAAATACTTTTGGGATAAAATCAAAGCTAAGAAAATGAAAGCTTTGAAACATGTGGAAATAGTGTAGGTTCACAACATACTAAGCACTGTGGAAGCTGCAAATCTTCTATCCCTCTTATTTGGCATACATAAGCAAAGTCAACTGTTTTGTGTTTTTCCAGACATTGCTCAAAATTCAAGTTAGATTCATATGAAATTGTCTGACTAGAAAATGTTGTGTTGAGTAAATTGAACATGTCTTTGAGTAAATTGAATGTGTCAATGTCAAAAATAATATTTATTATTTTAATTATTTATTATTCCTACTACTTCTATTTTTCATTTAGTGTGCTTTGGGGTAAAAAGGAAAAGCCCCATAGAAAAAAATGAATTGTCTGAAAATGAAATGACTTTTTAAGAACCATTATAGCAAAAAGCACAACATTTTATGGGATGTAGATCTGTACTGTGGCAAAGGAGATGGGTTTACTTTGAGTAACTGATACCATTCAGGGCATGTCCTTGAAGATCAGTCTCCCCAGACTTCATGGTCACTACACAAAGGGGAAGAAAGGGAATGAATATCAATGAGATAATCATCATGCCTACTTCAGCCAGTTTTCTTGCAGTATTTATCTGAATCAAATTTAATCCACACTGAGATCCCACTCTCATCAATAATGGGACATCTAATGTCCCTGATCATTAGGGATCCCTCCCTCTCTCTATGCGATCATGTAAATCCAGAAAACCTGGTAGGTACTGGTTATTCACAGCTGGTCGCCGGTATTGACTCTGTTATTCTGCTCCCTAATGATGCTATGGAGCATTATCTTCCAATATTCCTTAAGCACTCAGCTCTGGGTAGACTCAGGAATGAATCCCTCAGTCATTCACCCCACCAACTCCAGACCTTCTGCTCACCAGACTCCAATATATAATGTGCAGCTTCCTTGTCTCACTGCTGACCTGCTTTCCATTCTGTTCTGTTTCTTCTCGTTAGCTCTCCTAAAGCTTAGCTTCCCATTTTCTACTGCATTTTTCATTTTTGAATAACAACAGCTTTATTGAGATATGATTCACATACCATAGTATTGATCTATTTGAAGTATATAATTTAATGTCTTTCAGTATGTTCAGAGAGTTATGCAGCAATCTCTACAATACATTTTAGAGCATATTTATAATCCCCAAAAGAAATTGCATATGCATTAGCAGTTATTCCCCATTTTCCTTCAGTTTCCCCACCCTCTGAGGTAATAAGCAACTACTTACCTAATTTTCTGTTTTAATAGGTTTGTCCATTCTGGACATTTCATATAAATGGAGACATACAATATACACTCTTTTGAATTTGGCTTCTTTCACTAAGCATAATGATTCGCAGATCATTCATTCTATGGCATATATTAGAAGGTAATTCTTTTTATGGCTTAGTAATGTTTCTTTACATGAATGTTCTACATTTTGTTTATTAATTCACCAATTGATAGACAGTTGAGTGTTTTCAATTTGGTGCTATTATGAATAATACTATCATGAACTTTTGTATAAATGTCTTTGTGGGGACATATGTTTTCTTTCTCTTGGGTAAATTCCTAAGAGTAGAATTGTTGAATTGTATGTTAAGTTTCACTTTTTGAGAAACTGCCAAGTTGTTTTCCAAAGTGACTGCACTATTTTCTATTCCTACAAGCAATGTTATCAGGGTTCTAGTTTCTCCACATCCTTACCAAAACTTATTTGTCTTTTGAATTATAGCCATTATAGCGGGTGTGTAGTGATATGATTGCATTTTTAAAATTTTGAAGGCACCCAGCTTGGCCAGGATCAGCTGGATAGTAATGGTGAAAAAGGGCATCTTTGTCTTGTGCCAGTTCTTAGAGGAAAGGCTTTCAAATTTTCCCCATTCAGTAAGGTGTTAGCTGTGGGTTTATCATATATGACCTTTATTATGCTGAGGTATATTCCTTCTATGCCTAGTTTGTTGAGAGGATTTTTCTTTTTATCATGAAGAGACATTGAATTCTAACAAATACTCTTTCTGTGTCTATTGAGATGATCATATTGTTTTTATCCTTTAGTCTGTCTATGTGATGTTTCATGTTTACTGATTTGCATGTGTTGAACCATCCTTATATCCTTGGGATAAATTTCACTTGATTGTGGTGTATTATCTTTTTGATGTGGTGTTGAATTCAGTCTGCTAGTATTCTTTTGGTGATATTTGCATCTATGTTCATCAGGGATATTGGTTTAGTTTTCTTTTTGTTGTTGTGTCTTTGTCCGGTTTCGATATCAAGGTAATGCTAGCCTCATAGCATGAGTTAGGGAGAATTCCATCCTCTTCAAATTTTTGGAATACTTTGGAGAAAATTGGTGTTAATTTTTCTTTATACATTTGATAGAATTCAGCAGTGAAGTCATTTGGTCCTGACGCTTTTTTGTTGTCCTGGAAGACTTTTTACTACTGATTTAATCTATTACTTGTTATTAGTATGTTCAGGTTTTCTATTTTTTCCAGATTCCATCTTGGTAGGTTGTATATATCCAGGAATTTATTCATTTCCTCTAGATTTTCCAGTTTGTTAGCATATAGTTGTTCATATGATATGTTCATGTCAAAGATCTCTGATGATCTTTTGTATTTCTGTGGTATCAGTTGTAATATTTCCTTTTCATTCTGATTTTTAAAATTTGGGTCTTCTCTTTTCTTATTAGTCTAGCTAGTGGTTTATCAGTTTTATTTATCTTTTCGAACAAACAACTTTTTGTTTCATTGATCCTTTATGTTGTTTATTTCATCTATATTTTGTTTAATTCTTCTCTGATCTTTATTATTTCTTTTATTATACTAATTTTGGGTTTGGCATGTTCTTGATTTCCTAGTTCCTAAAGGGCTTCATTAGATTGTTTGAAATTTTTCTATTTTTTTGATATAGGTGTTTATTGCTATAAACTTCCCTTTTAACATTGTTTTTTGTTGTAGTCCACAGGTTTGGGCTTGTTGTGTTTCCATTTTTATTCGTTTCAGTTTTTAAAAATTTTCTTCTCCCGCAGCCCCAGAGTCAAAGCCGGTTGCCGACCCTGTCCCGTCCCGCAGTAGCCTGCCTCCTCTTTCCTTTCAACATGATAGATGTCACTGTGTCCTTTGCCAAGGACTTCCTGGGAGATGGAGTGGCCACAGCCATCTTCAAGATAGCGGTAGCACCCACCGTCCAGGTCAAGCTGCTGATGCAGGTTCAGCATGCCAGCAAACATATCACCGCAGATAAGCAATACAAGGGCATTATAGACTGCGTGGTCCGTATTCCCAAGGAGCAGGGGAGTCCTGTCCTTCTGGCGCAGTAACCTGGCCACTGTCTTCAGATACTTCCCCACCCAGGCTCTCAACTTCGCCTTCAAAGATAAATACAAGCAGATCTTCCTGGGTGGGGTGGACAAGAGGACCCAGTTTTGGCTCTACTTTGCAGGGAATCTGACATCAGGCTGTGCCGCTGGGGCCACATCCTTGTGTTTTGTGTACCCTCTTGATTTTGCCCATACTCGTCTAGCAGCCGATGTGGGTAAAGCTGAAGCGAAAGGGAATTCCGAGGCCTCAGTGACTGCCTGGTTAAGATATGTAAATCTAATGGGATTAAGGGCCCGTACCAAGGCTTCAACGTGTCTGTGCAGGTTATTATCATCTACCGAGCTGCCTACTTCGGTATCTATGACACTAGAAATGGAATGCTTCCGGATCCCAAGAACACTCACATTGTCATCAGCTGGATGATCGCACAGACTGTCAGGGCTGTTGCTGGATTGGCTTCCTATCCACTTGACACAGTTCGCCCCCGCATGATGATGCAGTCAGGGTGCAAAGGAACTGACCTCATGTACACAGGCATGCTTGACTGCTGGAGGAAGATTGCTAGTGATGAAGGGGGCAAAGCTTTTCTCAAGGGTGCATGGTCCAGTGTTCTCAGAGGCACAGGTGGTGCTTTTGTGCTTGTCTTGTATGATTAAATCAAGAACTACATATAAGGTATTTCCTAGGATTTTTCCCCCTATGAGCAGGTATGTTGTATTATATAACATATCTTGAGCATTCTTGACAGACTACTGGCTGTCAGTTTATCAGTGGCAACTATTTACTTGTTGAAAATTAGAAGCAATAATATTCATTTGACCAGTTTTCTCTTAAAGCCATTTCCATGATGATGGTGGTGATGATGATGGGACTCAATTATATTTTTTATTTCAGTCACTCCTGATACATAACAAATTTGAAGAAATTTTAAAAATCTAAAATTAAAAAAATTATTCTTAATTTTTTTTCTTGACCAATGGTTGTTCAGGAGAATGTTGTCTAATTTCAGTGTAATTGCATAGTTTCCAAAATTCCTCTTTTTATTAATTTCTAGTTTTAATTCACTATAATCCGAGAAGACAGTTGGTATAAATTTGATTTTTTAAAAATTGTGGACTCATTTTGTGGCCAAACATATGACCTGGAGAATGTTTCTTGTGCCAAGAAGAGGAATGTATATTCCGTAGCTGTTGAATAAAATGTTCTGTAGGTGTCTGTTAGGTCTATTTGATCTAAAGTGAAATTTAAGTTCACTTTAGATTCAATGTTTCTTTGTTAATTTTCTGTCAGAATATCTGTCTAGTGTTGATGGGGGTTGAAGTCCCCAACTATTATTGCATTGAAGTCTATCTCTCCCTTTGGATAATGTTTGTTTTATAAATCTGGGTGCTTCAGTGTTGGGTGCATATGTATTTAGAATCGTTATATTATCTTGCTGAATCTACCCCTTTATCATTATCTAAATACTGTCCTTGTCTCTTTTTTTAACTGTTTTGACACAAAGTCTCTTTTATGTGATATAAGTATAGCAACTCCTGCTCACTTTTGGTTTCCATTTGCATGGAATTTTTTTTTTAATTCCTTTGCTTTCAGTCTATATGTGTCTTTACAGGTGGGGTGAGTTTCTTGTAGATAGCATACAATTGGGTCATATGTTTTTGGACCCATTCAGCCAGTCTATATTTTATAAGTGGATAATTTAATCTGTTTACATTCAAGGTTATTATTGGTAAGTGAAGGCTTATTCTTGTAGTTTTGTTAATTGTTTTCTGGTTGTTTTGTATGTCCTTAGTTTCTTTCTTTCTCTTTTATTGTTTGTCATCATAGTTGGGTGGTTTTCTGTAGTGGTAACATGAGTCCTTTCTCTTCCTTATTTGTGTGTTTGCTCTACCAGTGAGTTTTATATTTATATACTGGAAGTCCTCACCAGAGCAATTAGGCAAGAGAAAGAAATAAAAGGTATCCAAATTGGACAAGAGGAAGTCAAACTGTTTCTTTTTGCAGATAACATGATCTTTTATTTAGAAAAATCTGAAGACTCCACAAAAAAACTCTTAGACTTGATAATAAATCAAACAAATTTGCAGGAAACAAAATAAATATACAAAAATCAGTAGCATTTTTATTTATCAATAATGAAATAGCTGAAAAGAAATCAAGAAGGCAATCTCATTTGCAATAGCTTAAAAATACCTAAAAATAAATTTAACCAAGGGAGTGAAAGATCTTTGCAAGGAAAACAACAAAACACTGATGAAAGAAATTGAAGAGGGCTGAGTGTGATTGCTCATGCATGTAATCCCAACACTTTGGGAGGCTGAGGTGGGAGGATCTCTTGAGTCCAGGAGTTCAAGACCAGCCTAGAAAACATGGCAAGAGCCTCTCTCTCAAAAAAAAAAAAAAAATTTGCTGGGTATGGTGACACATGTCTATATAGACCTAGCTACTTGAGAGACTAAGGCAGGAGAATTTATTGAGCCCAGGAGTTTGAGGTTACAATGAGCTATGATCACACCACTGCACTCCAGCCTGAGTGACATAGTGAGACCCTGTCTCTAAAGAAAAGAAGATAAAAGAAATTGAAGATGACACAAATAAATGGAAAGACATCCCATGCTCTTGAATTGGAAGAACTAATATTGTTAAAATGACCATACTGCTGAAGGCAATCTACATATTCAACAAAATTCCTATCAAAATACCAATGTCGTTTTTCACAGAAAGAAAAGAATCCTCAAATTTGTATGGAACCAAAAAAGATCCCGAATAGCAAATGCAATTATGAACAAAAAGAACAAAGCTGGAGGTGTCACACTAACTGACTTCAAAATATGTTACAAGGCTATAGTAACCAAATGAGCATGGTATTGGTATTAAAAACAGACACATAGACCAATGGAACAGCATACAGAACCTAGAAACAAATCCAGGTATTTACAGCCAACTATTTTCAACAAAGGCGCCAAGAACATACCCTGGAGAAAGGACATCCTCTTCAATAAACAGTGCTGGGAAAATTTAATACCCGTATGCAAAAGAATGAACTAGACCTCTATCTCTCACCATATACAAAAATCAACTCAAAATGTAGTAAAGACCTAAACATAAGACCTGAAAATAAAAACTACTAGGAGAAAACAATACTTCAGGACATTGGTCTATGCAAAGATTTTACGACTAAGATCTCAAAAGCACAGGAAACAAAATCAAAAGTAGACAGACAGGACTATAATACACTAAAATGCTTCTGCACAACAAAAGAAATCACAACCAGAGTGACAAGACAACCTGTTGAATGGGAGAAAATATTTGCAAACTATTCATCTGATAAGGGACCAATATCCAAAAAAGACAACAAACCAAAACAACTCAACAGCAAGAAAGCATGTAATCCCATTTGAAAAGTGGACAAAGTACATGAAAAAATATTTCTCAAAAGAAGACATACATATATGTCGACATATATGTATGACATACATATATGTCTACATATATGTATGACATACATATATGTCTACATATATGTATGACATACATATATGTCAACAGGTATATTAAAAAGTTCAATATTACTAATCTAATCTTACCCTAGTTTGAATGGCTATTATTATTAAAAAGACAAAAAATAACAGATGCTGATGAAGATGTAGAGGGAAAAAAGAACTTTTATACACTGTTGGTGGGAATGTAAATTAGTACAGCCACTATGGAATATAGTATAGGAATTTCTTTAAAAACTAAAAATAGAACTACCATACGATTCAGCAATCCCATTACTGGGTATTTATCTAAAGGAAAGGAAATCAGTATATCAAAGAGATATCTGTACCCTCATGTTTACTGCAGTATAATTCACAATAGCAAAGATATGGAATCAACCTGTGTCTAACATCAGATAAATGAATAAAGAAAATGTGGTATATACCCACAATGGAGTACTATTTGACTAGAAAAGGAATGAAATCCTGTAATTTGCAGCAACTTGGACAGAACTAGGGATCACTATGTTAAGTGAAATAAGCCAAGCACAGTAAGACAAATACAGCATATTCTCATTCATATATTGGAGCTAAAAAAGTTGATCTTGTAGAGGTAAAGAGTAGAATGATAGCTACCAGAGGCTGAGAAGAGTGTGTGGGAAGGGCATGAGGAGAGGCTGGTTAAGGGTAGAAACAGTTAGACAGAATGAATATTTATTATCAGAGTAGGATGATTATAGTTAATAACGTATCATATGTTTCAAAATAGCTAGAAGAGAGAATTTGAAATGTTCCCAACATATAGAAATGATAACTACCTGAGGTGATGGATACTCTAAATGCCCTGACTTGATTGTTATACATTCTGTGCATGTAAGAAAATGTCACATGAGCCCCATAAAAATACACAAATATTACGTATCAATAAAAAATATTTCAATAAGTTGGTTACATTTAAAACTTGGGAGAAAGTTTTCTGGGTATTTGAACTCTCTGGAATCATCCAGATGTTCTCACAACACTAAGCCTCAGTCTTACAAGGTGGCAATTGGCTGGAACTGTATAATTGCCATTCTCTTTAGAATGGCATGTTCTCTCCAATTTACTAGAGTCATATCTTTTGAGTGTGACAATGATTGTATCAGTTTCCATTTTTATTATAGTTGTGCTGTTATTTTTCTGTAGTTAGGCAATATTTTGTGACTCCATGTCTGTAGCAAAAGTGGAAAATAACATAGAGACTGCAAAGACAATATAATTCAAGAAAAGTAGGAGAGAACAAAGTTGTTTTCAAAGAAACTAAATAAATATACAAAGAAACAAAAAATATACAAAAATCTGTAGTATTTCTGTTTATCAATAATGTAATAGCTGACAGAGAAATCAAGAAGGCACTCTTCATTTACAATAACTTAAAAAATACCTAAGAATAAATTTAACTTATTTATTGTTAAATAAAAGATCTCTACAAGGAAAACAATTGGAGACAACTCTTACATGTTTAATACACAAAGTATGTCTTTGTCAAAAAATGCAACTGAAGTCATCATTATGAACAAACTACAGAAAGATAACGCATGAGAATTTAACGAGCTGAGAGAAACAACAGAAATTTCAATGGTGTTCTATTTTAAAAGCAAATCAAATAAGTAATGCTACCATGAAAAGTAATTATTAGTTTTTTTAATGCAAGGGAGCTTATAAAATTTTTTTAAATTTATGTTTTGATTATCTTATTTTTTGAAAGAATTGTTTCTTTGGCAAGAAATAATCTACCACACTTTTTAAACCAGACTCAGTTTTCAGAATTGGAAATTACAGGAATTCCCCAATTGCAGAGTTGAAGACCTAATTCCAAACAAAGTTCTCTAACTTCAAACTTTTTAAAAATAAACAAATGTTTTTCACTTTGTTTTTCACAATTAATACTGATAGAATGAATGGTTATCAAATAAACCAAGTAGCATTATAATATGATACTGACAGCAAAATATGATGGTGTTAGAAAATTAGATGTCTTCAATGTCGTGAAAGTAGTTACTCTAAACATAAAAGCAAACTATGTTTGGAAGTAAACCTATATTAAAAGCATGTGTTCTCCGTTATGAGCTAAAATAAAACAAAATATTGTTCTCATTTAAGGGATTCAAGGCCAAATTCTGTACATCTATTTTAAAGAGGAATACAAAGTCTAATCCATGTTATATAGAAAAAAGATGTTAGTTTTCTAATTATAAATCAGAATAATTGGAGTTTGAAAATTTTCAGTTAATCTTTTTATTTTGAATTTAATATATAATCCAAAATATCATATCTGCTTACATTATGCCATGCACTTCTAATTTAGTTCTAATTTAGTAAAAATAAAGACTGTTTGATTCTATTTCTGGAAGTTAAATGTTCTTATACTTGGGCTTCTGCACACAATTACATTACCTACTTTGACCCTCAAAGCTGTTGAATTGTGAACACCTGCACCAAGAAAAGTGTTCAAGGATCTTCATGTTTCTTCATGATCCAGTCCAGATTATCAAGATGGGAGAATGTATGGGAACTATGAGCAGACACTCAGAAATAGAGACATCTTTTCCTGAAGCGAGGAGAGCAGAATGGGACCACCAGGATACTCAGCTGATGAAGAAGGTGATGGCCCAATGTTGATTTTAGTCAGTAGGATGCAAGCTCAGCATGAAAATGTTTGAGGTGGTGGAGGAGGTAACTGCGGGTGGCAGGAGAACAGTCTCAACTTTTTTTTGTTTGCTTGCTTGTTGGTAGCTCATGGCTGTGCAAGCTCAGCACAGGCCATTTACTGAGGATCCTTCCACACTTAACTCCACAGCAGCCCCTCTCCCGGACCCCTACTTCTGCAGGGGGCAGTATCTAGTTCTGGCAGAGAGGTAAAAATGTTTCTTGTGTTCTGAATGGCTAATTATATATCAGTGTTTACAAGGGAAAGGTCCCTACTTCTAACCCCTGCAGCACTTGGCCTGTGCTCTGAAACGTATACTTTGACTACCCCTTTTATCTTAGCATGAAGAACTGGCACTGACATTTATTAGTCATAAAGTTATTCATTCCATTTTAAATCCAACTATGGTGCTCAACTCCCTAACTTCCTGTGGCAGTGGGTTTCACAAGTTGGCTATACGTGGCACAAAGTAATAGTTTCTTCAACTTGCTCTAATTTTGTCAGCCATCAATTCCACCAGATGACATTTTGTTCTTCAGTGACATTTTGGAGCATTCAGTTCTTTGGTTGAGATTACAAAGAAAACCCTCCCTCAGGCTCTCAGGCACTAAATAATCACCATTTGCCATTTTCCCTTTAAATATGTTAGCCTGGTTTGATTGACTTGGAGAAAAATCTAAAATTCTTTTTTCTAATTTGCCGTCATCGTATTCGAATTTTAGTCTTCTCTACTAGTCTTTCTTGGGAGTCATTTCAAATGCCTATTTATTATTAGGTATATTTATAAAGTGGCCTATTTGGTAGGATTAGGATTAATTTGTGTGAACAGTGTGCTTCTCAAAAAGTATTGAGAGTCTTCTAATGACAATGTCTCACAATAAATTGTCTGTGGCCATCACTTCATCCAGGGAGTAGGTAACAGGATGAATAACATGATTTTAGAGCAATTGAATTGGTTCTGTGCCTGCCACCTCCCTCACTACCAATTCTCCCACTCACTCTGATTTATGAAATTTTTCTACTGAGGTTCAGTTACTTTGATCCCTATTTCAACTAAAACTCCCTCAAAGAGAGGTGTTATTTAAGCTACTGTCAGCCAAATTATGATGATATATGACATCTCTTATTCTTTAAACCAGTGGTTTTCAAATCTTGTCCTGTAGAACCCTAGAGTTCCCAGAGTATCACAGGAATCATAGCAGATTAAGAAGAATCAGATGGGCTAGGTTACAATCAGAGCAACTCTGCTGGTACTGTCACAGGATCCTTAAGTGTAGCTTTTCCAGCCAGAAACCTCTCTGGCCAGTGGCACCTTTGCCTGAGTTTGGACCTACTGGGCTCATTCCACCCACCTGGCCTGGCAGGCTGAGCTCGGTTTGTGCTACTGGCCTGAATCCTACGCCTGCCAAGGCTGAGCCAGGCATGGAGCAGCGAAGGGTTTGGGAGTGAGTGAGCATGGGCCACTGCTCACAGCCAGGCATGCTGGCTACTGTTGAGAGGTGACAGCATGCTGGCAGCCCTCGCAGCCCTCGCTCGCTCTTGGCGCCTCCTTGGCCTTGGCGTCCACTCTGGCCATGGTCGGGGAGCCCTTCAGCCCGCCACCGCGCTGTGCGGGCCCCTCTCTGGGCTGGTTGAGGCCGGAGTCGGCTCCCTCAGCTTGCCAGGAGGTGTGGAGGGAGAGGCTCCGGCAGGAACCGGGGCTGCGCGAGGCGCTTGAGGGACACCTAGAGTTCCAGATGGGCGTGGGCTTGGCGGGCCCAGCAGGCCCGGGCAGTGAGGGGCTTAGCACCCGAGCCAGCAGCTGTAGAGGGTGCACTGGGTCCGCCAGCAGTGCCGGCCCACGGGGGCTGCGCTCCATTTCTTCCCGGGCCTTAGGTGCCTGCCCTCCCCCAGCCCTCAGCCGCCGTGGGCTCCTGCGCGGCCTGAGCCTCCCCAATAAGCGGGGCCCCCTGCTCCACGGCACCTGGTCCCATCGACCGCCCAAGGGCTGAGGAGTGCAGGCGCAAGGTGCTGGACTGGCAGGCAGCTCCACCTGCGACCCTGTGCAAGATCCACTGAGTGAAGCCAGCTGGGCTCCTGAGTCTAGTGGTGACTTGCAGAACCTTTATGTCTAGCTAAGGGATTGTAAATACACCAATCAGCACTCTGTATCTAGCTGAGGGCTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAGGGTTTGTGGAGGCACCAATCGGCACTCTGTATCTAGTTAATCTGGTGGGGAGGGAGAACTTTTGTGTCTAGCTCAGGGATTGTAAACACACCAATCAGCTCTCTGTAAAACAGACCAGTCGGCTCTCTGTAAAATGGACCAATCAGCAGGATGTGGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCTGAGCCACCACTTGCAACCTGCTCGGGTCCACTTCCACAGTGTGAAAGCTTTGTACTTTCGCTGTTTGCAATAAATCTTGCTGCTGCTCACTGTTTGGGTCCACACTGCCTTTATGAGCTGTAACACTGACTGCGAAGGTCTGCAGTTTCACTCCCGAAGCCAGTGAGACCACAAACCCACCAGGAGGAATGAACAACTCCAGATGCGCCACCTTAAGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTCACTCTTGAGCCAGCGAGACCACGAACCCACTGGAAGGAAGAAACTCTGAACACATCCGAACATCAGAAGGAACAAACTCTAGACACACCGCCTTTAAGAACTGTAACACTCACCGCGAGGGTCCACGGCTTCATTCCTGAAGTCAGTGAGACCAAGAACCCACCAATTCCAGACACACTGTGACAGTGCAGGCAGCTCCAGGTGCCACCACAGGCACCGGCTCAGGGGCCAGCTCTTTGCAAGACTGTGGCTGGATCAGATGTACTGCAAGCAGCTTCTGTTGTGGGTACCCATGTCTGGGCAAGGGAAATGAGTTGGTGCCCGGAAGCTTGGAGACACCAGGAACTGCACACCCCCAAAGAGGGTGTCACAGCCCTGGCTTGGGGAGCCCCTGGGCGTGGGGTCCCCAAAGGACTGTAGCTCTTCTCTCCTTCTCTCCTTCTGATTGCCTGCAACATGGTGAATGGGGGGTGTGTTTCAGCCCTGTTTGTGTTACAGCTTTTTCAGTCCCATTCAGAAGATCTGGAATTCTTGTCCTTCCTCCAGGAAAAATGCCATTCCTGGACAACTGGAGGGTGAGCACAGCAGAGAGGAGCTTCACTGAGTGATGGAATAGCTCTCAGGAGACTCAAAAGTTAGTAGCTCCTTTCTGCAAGCTGATCATCCTGATGGGTGTGCAGCTCTCAGTGGAGAGGAGGCCCATAGAGGGTAGCTCTTTTCCGCAGGCAGATCATCCCAGTGAGTATTCAGCTCTTGATGGAGAGCTATCCACCTGGCATGGATAGCTGTTTTCTGCAGGCAGATCATCCTGATGAGTGTCCAGCTTTCAGTGGAGAGTAGACCCACAGTGGGTAGTTCCTTTTTGCAGGCAGGTCATCCCAACAAGTGTGAGTCTGGCTGAGTCTGGAGTTTTTATGTGCTCAGAATGGAGACAGTGTGTGCTGATTGATCCATGGGCAGCCACAGGCAGGCCTGGAAAAAGCACCATCCAATTGGCTGAGTGGTCATCAATGAAGATCTCACTCCTGATCATGGACTTTGCCCAGTACTGGCAGCCCAGCCCCCATGCTGGGCCTCTAACATGCCATCTCCAGCATGCAGGGTGTCCATGCCAAGAGGTGCCCTCAACCGCCCTCCCTGCTCCTTACTCCCATCCCACACTCCTCGGCACCCAAAGTCCAGAGGGGGCCAAGATGGCAGGGGGCTGGTATGTCAGCACCACCCTACGTGCGGGCACACCTGGCCAGGTTGTGACAGTGCCCAGGGTTGTCCACAACTTTGCTCCATCCCAAGCAGGCACCGGGAGTTGGGAGAGGGGAGCAGGGCACTTTCAAGCTTGCAGGGGCATGGGGCCTCCTGGGCCCTGAGAGCCCCAGGAATGCAGGGACCTGGAGCCATGGCTGGGCAGCTAAAGCTGCACCCAGGAGTATGGGGCTCCTGCCCTGCCAACTTGGTAGGGGGCAGGGCTCCCACCTGATCCTGCCCCCGCCAGCTCCACAAAACATGCAGCCATTGCTATGCCCTCCCTGCTGCAGCAGGTGTCTCCACAGCAGCTGCTCCAGATGGGCCACCACCACCATCAGTACCTACTGTAGACAGTAAGCTTCTGTGTTAAGATTTTTATGTAATAAGAGTCTCACATTCCTATTATTATTTTTGCATCTCTGTTTTAAGTGCTCAGGTTAGTCCCTTTTGCATGAGGCAAAGAGTGAGCCTCCAATACTTTTATGTCATTTTCACTTAGCTAACTCTCCCATGTTCTATATTTCCCCATTTCACCCTGGCTTCTGATGGGTATTCTTCCCAGCACATGCTTTTGTTTCCCCACTGGATTATAATCCAGAGCCTCTCCTGCTGCCTATAGAATTGTCATCCTTGCTCCACTGATAAGAAAAAAAAAGAAGAACTGAGACTAGGAAGAGAAAGAAAGAATAGCTATGCATATGCTTCCACTACTTCCTTCTTTCCTAAAATATTGTATATATAGAATATCATTACCCTTAGGAGCTTTGGAATGGATTCCTCAACAAGTGAGAAGTATCTGTTATATATATAAAATCAAACAGGTTAAGAGACCTGGAGAGTTGGAGCTACATAAAAACATATTAATCAACCTAAAGTCACTTGCTACTAGCAAGCATTAAAAAAATATATATTTAGGAATAATGAAAAATTGGGCATAAATTGGAATAATTTAGATGTAGTCAAAATAAAAAGTGAAGAGATTAATTATTAAACTGGTGGAGGGAAGCTAATTTTTAGCTTTGAAGAAATTGAGTAAAAAGTCACATAAAAAGTTAGAGATTTAATTCTACAGATTAAACATTTCTAAAAAGAGAAAAAACAAAATTAAAAAGGAGTCAACAAACTGGGAAAAAATATATAAATTTGACTAAGGATTGATTATATAATATGGGTAACTATTCTATCAAGTCTAATTATAAACAATAGAAATAACTCTAGATAATTTCTTTTTTAAACAGAAGAATTTTTTGAATTAAATTATGTGATGCACCTTGTAAAACTAAAGACAAAAAAATCAGTTCTTGGTATGAATGAGAACCAAGGGAAATTTCATGTAAATATGAGAAACTCTAATGGCTGGGCAGACTTTCAGAAAGATATAGGCATCTTGATGTGGCTTTCATCATTTTCTATTTTTGTTTCATTCTTTTCAGGATTCAAGTACCAGGGAGTGTTTAATTGGCCAGGGAGTGGGCACATGTCTGATGCTGTGTAGTCTGCAGCAGAAGAGGGATAATTCCCAAAGGAAAAATCCATGTATAAAAGAGAAAGGACTCTGAGTAGGCAAAAGAAGGAGATGTCCATGATGGGTCTCATTCAGATTTTTAGAAAAACATTCAGAAAAAAAAGGTAATCAATAAATGGACAGAGGACATGAACTGATAATTATAGAAGATGCAACATAAATTAATATAGATAAGGAAAATATTGAGACTTAAAAAAAAAAAGTTAAGCCAAAACAAAGCAAACATGGAAAGTACTAAACAAATAAGCAAAAAAATCAAAGAACTTTTTATTGACCATGAAAGAATAACACTCTTCAAAAGTTAGACAGAATTGCCATGTGATCCAATGACTCTACTTCTCCACATATACCCCAAAGATTGAAAAGTAGAGACTCAAATACTCATATACCAATGTTCATTGCTGCATTATTCATGATAACCCAAAGGTGGAAAAGAACCCAAATAATCATGGATCAATGAATGGATAAACAGAATGTAAATACATACAATGGAGTTTTATTCAGCCTTAAAAAGGAATGAAATTCTGATACATGCTACAACATAGATGAATCTTAAAACCATTTTGCTAGGTGAAATAAACCAGTCACAGAAAGACAAATGTGGTATGATTCCACTTATATGAAGTACCTACAATAGGTTTCATAGAGACAGAAAATAGAATAGAGGTTACCAGGGGTTGAGGAGAAGTGGAAAATGGGGAGACATTATTTAATAGATACAGTGTTTCTGTTTGGGATGATGAAAAACTATGGAAATGGATAGTAGTGATGGTTGCACAATACTATGAATGTACTCAATGCCATGAATTGCACATTTAAAAATTGTTAAAAGGGTAAATTTTATGTTGCATATGTTGTACCACAATGTTTTAAAAAGTGAATGACACTTGCTATACTTGCTGCTTGGGATAAAGCTGTGTTTCACTAATGCATATATACTGAGAGTGACAATGAAAAGTGGAACAATACATTTCAGAAAGCAATATGATAATAATTTTCCTCAGAACCCACAAAATGCTCCTACCTTTTAATTTAGCTATCCTATTTGTAAGGAAATAATCCGAAAGTAGAAAAAGGCTATTTGCATGAATCATAGCAGTATCAAAAGATAATAAAGAAATAGAAAACAAGCCTAAATGTGCAAAATGATGGGAAATTTGTCACACTAACTCAAGGAAATGTTATGCAACCATTAAAAATTATAATGATTGTGTGATAATTTTTATGATATATCAGCAAGTAAAAAGAATTACAAAATGGCGTTATGCTATGATTAATTCAACATTCATGAATGAAAAGTTTTATGGTAAATTAAGAGAATTATTACTAATATTTTCCTTTTAATTTTTTCTTAACTTTTGTCATTTTACCTAAATAATAAAAAGTGATAATGTTTAGCATTAAACAAAATTTAGAGAAACTAAATATTTGAAATGTATTATGCTACATAAGATAGAAAAGTGATATAATCTTAAATACTTCTAGTAGAAATTATATGGGATATTTGAAAATAATCTAATTGCCTATTATCATTTTTATTGTAAAACTAAAGGTACTTAAATGATACGTATACATCAGCTATAAATAATAGAAATCAACTTACAAAAACCTTACTTATAAAACCACACACATTCATTTAGGTCTAGAAGGAGCCTGGAACTTGTATAATGTAGTTATATTATGAAATGCACATTTTACAGAACAATGGAAAGGAAAAATAAATTGTGAGATGACGTGGAAAAAGGTTTTACAGATGTTATTGGCAAAAGGAAGACAGGATAATAAAATAGAACATCTCAGGGAGGTTCTCAGATGCAAAAATCTTCCAACAAGACATTTCCCATAGAAGTGGCAGAAATGAATATCAGTGTGCTAACAAGCCTTAGTATAATTACATATAGAATCAGAATAATTACATATAATATCAAATATCATTGCCTCTATTTATAAGGGATGTAAAACAGTGGAGAAAATATGTGTAAAGATTTTTTTAAATGAGAAAATAATTTGCAATTAAAAAAAGAAAACTGAGAACAATGGTAGTGACAACTTCACAACCAGAAAATTCTTCATTTGTGTAACACCAATGTTTCTGCTATAGTTGGTATCTTCCCCAGATACAAAAAAATTTCTAAACTCTGTAGCATCAGAAGGGATCTTCGACAACATGTAACACAATTTTATTTTCTAGTTGGGTATGCTAAAGTTTAGAAAAAAGACACACCCAAGAAATATAGCAAGGAAAGACAGAGCCTGTCCATGGGTCTCCCTGACTCTGTGGTTCCCCACCCTGTGTGTGGATTGCCTCATGTTTTTGTGTCTATAGTGGCACCAAAGGATTAGGCTGCAACACTGCCCATGTGTTAGTACATTCTTCATCTAATGCCTCTGCTTTCTCCCAGGTCCTCTTTGTCCATTTATCTCCAAAGATATAAATAACTCCATTCTTTCACTATTAAAGGCTCTCTGTTCCATGGGCACTCCATGCCAATATTACTTAAAGCTTATTATATATTACTATACAGTCACTTAAGACATGGGATTCCTCCCTGTAGTGTTCAGTATATTTCAGAACTGAGATATTAACACATGAAATAAGCAACAATGCAAGAAGATAAACTATCCGGGGCTAAATCAGAGGTCAATATATCACTCTAGATAGACAGAGGAAGAAATCCATATGCACAGGATTTGGAAAAGCTTCATTAAAGAGACAGGACAAGGAAAAATAAAACAGTGTTTGTCAAAGCAGGATCTGAGAATCATCTGCAATTGAACCATTGGGAAAATTGATTTCAACATGTAAAACCAGGAGTCAGTATTTTTAACAAGATCCAGGTGATTTTTGTGCCTGGAAAGGTTTGAGAGCCACTTTCAAGCGGTTGGGAGTTTGTGCATGAACTGCTGCAGGAAGCAGCACGATGTGTTCTGGAACTGTCCATGGAGGCAGAGCCTTCAAATCACACAGTGTGGGAATTAATGTAAAAAGATGCCTCAGCAGGAAGCTACGGGGCAGAACAAACTTTAACTCTATGAACTGAAGAAAATAATCATGCCATTTAACCTTGGGTCACTACTGATATGAAATCAAGTGTGCACAAGATAAAAGAATCCAGGCTAGGTTCTCTGAAATTATGAGTTCAGATGACACAATCAGTGGTGTTTCTTAGACTTAAATAGGGTATTTTTAAAAACTTCTTCAGGCACAACTCTTAGTTCAAATGATTTACTGTTAGAGAAAAAAGACCAAATGATTTAGTAACTAGACTTAGGATTTCCCGTTCTTTTTGCTTTGCAAGGGAGATTTTAAAAAATTATTTTCTCTTTCATCTTACATCTTTGCTTAATAAATTGTATTAATACATCGGGGCATCTAGTGGAAATGATTCTGTTATAGTTTCATTGTAGCAGTTCATCTGAAAAATAATAAATATATAAGTTTGAATCAGTCGCTTTGATAGTGAGGGTCTATGTGGGATCTCTTTTGGGTAAAACCCCTGGCCCACTGCTCCATCCCAGGTAGACTTTCCTATGCCCTCCAGGTTTCAGGGATGTGGCGGATTCCCTCCCTTCTCTCCAGCTGCTCTCACTCTAAAGACTGTACATGTAATTAGGATACAACCTCCTTAGCTTTCTGGTTTTTCTTTGACCCAGAATTGAAGAATCGTATACCCTGTTTATTTTAGAATTTTGCACTAAATACTATATGGAGTAGGGGGCGGGGGATAAAAACAATGAGTGATGAGATGCTGATGAAATGGCAGGAATTCCCTTATCCCCCTCACAGGGCATGTGACAGGGGTGTGGCTCGCTTCTTCCTTCCGTGCCCCAGTGCTCAAACCCCTAGGGGGAACATGAAGACAGGCTGGTCGTGGAGAGTGTTTTTGGGCTACGACCCCACGGCAGCATCTAGGGTTGAGTGTTTACAGCTCCTGAAGCCCCAGTGGGCGTGTGTTACAGTGTGCTCTTTCAGCTTTGCCATCTGCAGGTGGCTTGTGTTAATCAGCTCAATTAGATGCTCTGCCTTATCCTGAGGACAGAGGGCTTTCTGTATCCCAGGTTCTTGCCCTAGTGTACTGGAAAAATTGGGTCACACGTGGGCTTGGAGGATGGGTGCAAGGTTTTATTGAGTGGTGGAGGTAGCTGTCAGTGAGGTGGATGGGGAGCCAGAAGGGGGATGGAGTGGGAAGGTGGTCTTCCCCTGGAGTTGGGCCACCCAGTGGCCAGACTCTCCTCTGATAACCCCTGACTGAATTTCACATCATCCTGCTGTCAATGGCCTGCCTGCCAGTGTCTGCTGGTGTCTGTTGGTGTGCTCTTCTGCTCCTCTCAACATCCAGCTGCTTGTGTGTGTGCCCGCTACAGTCCTGGGTTTTTATGGGCACAGGATGGGGGGTGTGGCAGACCAAAAGGCAACTTTTGGGGTGTGAAAACAGAAATTCCTGTCCTCATTTGGGTCTGTGGGCACAGGCCCGAGGGTGGAGCCCTCGCCAGGGACTCCACCCTTCTCTACCAAGCACTTCCCTACCCCTCTCCCATATCACTGACAGCTTTAAGACCTCTCCAAAAGCTCTCACAATGATTACCTTGTCATATCCTATACTGTATGTGGGGATGCTCTCCTTTTCCTGACATCTTCATGGACTGCATCTTTGCATTATTCTGACGAAGTCTCTGTATGATTATTTTCTGCATTTTTAACACCGTTGGACATAAGGCTAAAATCAAGGCTCTTTCTCCCCTTCTTCACAGGTACAGTTCTCATCCCCGTGGGACTCTCCTTCCAGGTAGATATTCTGAAGATTCAGAGATGGTACAATAGGTGGGAACTCATAGGGCATACTGTTTCCCTATTTCTCTCCTGCAGCCTCCTCACCAACCTTAAGTCTCATGTCCTCCAGGCCTATGTAACAAAGTGTGAATTTGAATTTGGTCACATCTCAACATTGATCACTCATACTTTTGGGTACTATGGAAATTTCTAGTACCTTTGGGCTCATGAGAGACATTTTCATTCTGATCATGAAGAGATGACACTTTTCACTCCAGGGATAATTTCAGTTCCCTTAAATTATGCCTTTCTGTTGTTCTAGTCTCATTTTCTTTACCAAACCTGCCTCCAAGTCTCATCTTGCTCCTGAAATGTTGACCCTATAATAGTTCTGCAGGCTTCCTTCCTTAATAATACAAATAGTTCTAAAACTCTATTCTGGGACTTGAAGAAAGATAAATGGCAAGTACACCCGCAATTATCTTCACCTAGAGTTCTTCCAACTCCCTCTTCAATTATCACCTCACTGTGTGCATTTACCACTCTACTTGTACACAATAAATACAGTCTTATTTCATACAACATAGATTTGGCTGTGTGGCAGGAATATTAATGTTTCTGTTGTCATTCATTAATTGAAAGCCCTATATCTATTTCCTTGGAGCACCTGCGCGGTGCTGCATAAAATGGGAGCAGGCAGCAAAAACTCTTGGTATGAGAGGGGTTTTTGCTGCTGTATGTATTGTGTTTTTCTAACACTGCTACATGTGATTATTAAGTACTGTGTGGGGTTTGTATTTACTTCCTACGTGCCCTTAAATTCTTGAGGGAATTATAATTTTACTAAATACCACCTATATGAAACAAAGAAGCCAAATGGTTCTCTAGAACAGAGCTAGAGAAGAAAGGAGTATAGAAACATATTTTCCTCATTGTAGGGTACATAGTTTTCCTAAATGATGGCAAATGTTTCCAGAAATCTAGCCAAAAATCAGTTAGATAGGAAATCATATAATAATGGTATAGCAGTTTGGAGCACCAAAAGTTAAAATTTAGGGATAAATATCTAAATGCATGGTAACAGAAGTTAATTTAGAAATATACAATTAATATGGATTCAAATATGATTAATAAGAATCTCTATATGTATATTTGAGGAAACAACTTGAAATTTTAAAGTATCTTTTATTTTAAAGTCCATAAAATTTTGAAGTTTTACCAGAATACCAAATATTTGTATTGTTAGTTGCTGTCTTAATTGAGGAGACTGTTTCAAAAGTTTTAGATTTCCGTTCTAGTCAAAAATCTCTGGTAGAGATTTTTTTTCTCTACTAGTCCAGTTTTCTTTTTTCATAAAGAGATAAATAATTTCAAATAGTCAAATGATTCAATTTTTGTCTTTACATTTAATGAGGTTTAATAAAGTACTATATTGAAAATCACATAATTTTAAAATTGTGATAGTATACACATAACATAAAATTTACCATCTCAACCATTTTTAAGTATATGGCTCGTTAGTGTTAAGCATAGTTACATTGTTGAGCAACTAATTATCTCCAGAAACTTCTCATCTTGCAAAACTGAAACTCTATAGTCGTTAAACAATCCCTCCCCATTCCTCATGCCCCACCGACAGCCCCTGGCAACTGCCATTCTACTTTCTGTCTCTGAGTTTTATGAGTACTCCTCTAGGTATTTCATGTAAGTGAAATCATTAGTTCAAATAATTGCACTTTCATGAACTATAAAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3476:HG3_PB_SVrefine2PBcRDovetail_3246:HG3_Ill_SVrefine2DISCOVARDovetail_5342:HG2_PB_SVrefine2Falcon2Bionano_3539:HG2_PB_SVrefine2PBcRplusDovetail_9607:HG2_Ill_SVrefine2DISCOVARplusDovetail_11265:HG4_Ill_SVrefine2DISCOVARDovetail_5208:HG4_PB_SVrefine2Falcon1Dovetail_4250:HG3_PB_SVrefine2Falcon1Dovetail_4257:HG2_PB_SVrefine2Falcon1plusDovetail_10320;NumClusterSVs=10;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_5208;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00401938;ClusterMaxSizeDiff=0.0039476;ClusterMaxEditDist=0.00674621;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=27919;DistBack=11567;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=6:80084903-80084905;PctSeqSimilarity=0.998;PctSizeSimilarity=0.997;PctRecOverlap=0.9971;SizeDiff=83;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4714.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:145:./.:0:3:0:3:./.:0:0:0:0:1/1:0:50:1/1:0:577:.:27627:.
chr6	80611272	HG2_Ill_SVrefine2DISCOVARplusDovetail_11267	T	ATTGTACTTCTATCCATAGTCTCTGAAATTAGCCTCTGATTTCTTTTTGAATACAACTTTTTAGGTTTGGATGTGATTGTATTGTACACTTTAATCACTCCAGGTGGATCTATATCTTCATGAGAAAAGGTTTCACAACCTTTGTCAAAAAAGACTCCAGCACATAATAACTCATTTTTTTTAATCTGATGATCTTCATCCTATAGTGCAAATTTTTGCTTAAATAATTGAGAATATCATCATCTCTATTACTCAACAAGGCCTATTTTAATACTAGTAATTGAATTTCTGCAAGAAGTTGTTTTTCAGTTTGACCTGCTGTGTGTACCCTTCTTCTCTTATGTTCAATGTAACTTGGCTTTTTCACTTTGTATTAGTCAAGGTAAGCTAACTGTTTTAACAGTGAACCCCAAATCTCAGCAACTATCACAACAAAAGTTTATTTTTTGCTCTAATCACAGTTCAGTTCAGAAAACAGGCAGCTTGCTTCCAAAGGATGAGCTGGGGACCCAGGCCCCACGCTTGTCAACAAACCAACGTATTTAACCATGTGCCTCTGGAAGGGGAAAGAGAGTGGAGATTCATGTGGAGAGGGCTTTCATGAATCAAGGAGGAACTAGTACCTGTTGCTTCTACTCACATGTACTGATCAGCCCTCAGCTACTGTGAGGGAGCTGGAAAACATGTAGCCAGAGACAGGAGGAGGAAATGAATATTGGTGAAGAGCAGCTGTCTTTGCCAAACATAAGCAGAGTAAATGAGAATTATCTTGGCCCAGGGTCTTAATATTTTATAATTAAATAATAATTAAGGAAGATGTCAGTTAAAAATATTTTGCCATCTACAATAAACCCTTTCAGGGGATCTAGTCAAAACTACTAGGATGGATACTTGTAAAAAAAATTTAAAAAACAATAACCTTGTCCCCTGACCATGCAATTATGATACAGAAGTAGGCAAACCAAAATGAATTTTAAATATAAAAATGAAATATGGGATGAACTAAGCTACATCAATTTTTTCACTAGAAAAAAAGAATTCTTATGTGAATTAAATGTGAATTAAAACACTATCACTATATATTTATTAGAATGGCCAAAATCTAGAACACTGACTACACCAAATGCTGACAAGGATGCTGAGCTACAAAACCTCTCATTCATTACTGGTGGGAATGCCATATGACATGGCCACTTTGGAGGACAGTTTGTCAGTTTCTTACAAAACTAAACAATACTCTTACCAGCAATCACACTCTTTGATATTTATCCACAGTAGTTAGGATCTCATGTCCATGTAAAAACTAGCACACAGATGTTTACAGCAGCTTTATTCATAATTACAAATAGTTGGAAGCAACAAGATGTTATTTAGTATGTGAATGGATAAACTGTAGTACATCTAGACAATGAAGTATTATTTAGTGATAAAGAGAAATGAGCTATCAATACATGAAAATATGTGGAGGAATCTTAAATGCCTACTACTAAGTGAAAGTAGCCCATTTGAAAAGGCTACACTATATGATTCCAACTATATGACATTCTGGAAAAGGTGTAACTATGAAGACAGCAAAAAGGTCAGTGGTTGCCAAAGTTAGGGGGAGGGATGACTAGACAGAGAACAGAAGATTTTTAAGGCAGTGAAACTATTCTATATGGTGCTCTAATAGTAGATACATGTCATACATTTGTGAAAACCTGTAAGATATATACAACACCAAGAGTGAACACTAATGCAAGCTATGAACTTTGGGTGATCACTGGTTCACTCTACCCACCTGAACCATTCTGGTGCAGAATGTCAATAGTGGAGTAGGCTGTGTTTATCTAGGACAGTGGGTATCTAGAACTCTCTGTATTTTCTGATTAATTTTGCTGTGAATCTAAAACCCCTCTAAAACCTGAAGTCTAATTTTAACATCATGATTTATAATGAAATTATAAAAAGTGACTTGAAAAATTAGCATACAGAAGCAGCATCAATAATGCAATAACTTTAATTTTGCTTAGATGATTAATAAATATTTTTCAAGCACTTACATTCAAACTGCAGGAGATTTGTAGATGTGTACAGGGATGGGCATGGTATTAGTAATGTTCTTTAATCCAGGGATCCATGGCAGGCCCCTGTGGATTTAAAGTCATTAATTTCTATTATTGTCTCAGTGCCTGGCCATGAGCCCTTAATCTGATTATCTCTCCTGCTATTCTAACCAGAGCTATTCCACCACTGTCTTATAACAGGTGCAAATTAATTCCCAACATAAAGCAATAAGAGCTACTATAGAAAGTTATTTAAATTTGTTTTGCTATTAAATAAACTTTAAAGTGCCTCAGTACTTGATTAAGAAATCCTGCTATTTTCTATAGTGATTTTCATTGCCTGAATTCAAATTATACTATATCAATCCACAATCCACAATATCAGGATTGAAGCGGTGCAATTAATGTTCCAATAACTCATTAATTGAAAGATTTCTCTCTGCAAAGGAGATTTTATTATTTGCATGTTGTTATAAATATTTTCCAAGGGGGCTCCAAATTCAGAGCATCACTGTAACTACCTATGCTATATAAATAACAATGCAGTGAATCCTTTACTAAGTGGTTAATATACACAATGTATTATGTTACATTAAAAAATGCTTAATACAATCAATTCACAAGAAAGAGAGTGTAACTTTTTAACTATAGAAAAGCCATTTTAGAAGTAAACTTTAAGCCGTGAATAGAAAGGAACAAGAAAGTCATGATGCTGATGTAAATAAGTAATGAACAGTTTCTTTCCTGGTGGAGGGGAATGTAACCCTTTTTGGAAATGAATATAAGAACATATTGTGGATTGCTTATGACAAGAAAATAGCTTAGGGCAGTTATTCTCTTTATTTTGTAGG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11267:HG4_PB_pbsv_7044:HG2_PB_pbsv_7049:HG3_PB_pbsv_6848:HG4_PB_SVrefine2Falcon1Dovetail_4253:HG2_PB_SVrefine2PBcRplusDovetail_9609:HG2_PB_SVrefine2Falcon2Bionano_3541:HG3_PB_SVrefine2Falcon1Dovetail_4259:HG2_PB_HySA_13035:HG4_PB_HySA_10410:HG4_Ill_Spiral_588:HG2_PB_PB10Xdip_26103:HG2_PB_PB10Xdip_26102:HG2_Ill_breakscan11_3715:HG2_Ill_Spiral_508:HG3_Ill_Spiral_7759:HG4_PB_SVrefine2PBcRDovetail_3479:HG3_PB_SVrefine2PBcRDovetail_3247:HG4_Ill_SVrefine2DISCOVARDovetail_5210:HG3_Ill_SVrefine2DISCOVARDovetail_5345:HG2_PB_SVrefine2PBcRplusDovetail_9610:HG2_PB_SVrefine2PB10Xhap12_5148:HG2_PB_SVrefine2Falcon1plusDovetail_10322;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11267:HG2_PB_SVrefine2PBcRplusDovetail_9610:HG2_PB_SVrefine2PB10Xhap12_5148:HG2_PB_SVrefine2Falcon1plusDovetail_10322;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0394357;ClusterMaxSizeDiff=0.0390957;ClusterMaxEditDist=0.176955;PBcalls=16;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=2895;DistBack=25539;DistForward=2759;DistMin=2759;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:80611273-80611271;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9993;PctRecOverlap=0.9993;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4715.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:132:1/1:0:44:0:29:./.:0:0:0:0:1/1:2:64:1/1:8:293:.:2938:.
chr6	82969645	HG4_PB_SVrefine2PBcRDovetail_3483	A	AGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACCTGAGGTCAGGAGTTTGAAACCAGCCTGGCAAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGCTGTGGTGGCGGGCACCTGTAATCCCAGCTATTCGGGAAGCTGAGGCAGGAGTATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCTATTTATTGCACTCTAGCCTGGGCAACAGAGCAAGATTCCATCTCAAAAAAAAAAAAAAAAGAAAAAGAAAAAATGTCTGGATGATAATTATTGAAATGCAGTGCTAAACATGGTTGTTCATTATACACTTCTGTCTACTTTTTGTATATGTTAGACATTGTATTGCAAATGATCTGTAGGAGCTAAAAAAAAAAAGGAGATATGTTTGGAGGCTTGGGCACAAATTGTTGCCTGGGCTCTGCCAAGCAGCCTCACCTGAGGAAGACATTAGTTTAAAAGCTGACCAAAGAATCCACGTGGGAATATTCAGAACTACATCATATTTGTAATAGCCCTAAACTGGAAACTGCTGGAATGTCCTTCAATGGGTGAATGATTAAATAAGCTATGGCATATCTGCACCATGGAATGCTACTCAACAATAAAAAGGAACTAATTATTGATACACCAACCTGGATGGACCTCAAGAGCAACATACTGAGTGGAAAAAAAAAAAACTAATCTCAAAAGATCATGTGATTCCATTTATATATATATATACATATATGTATAAATATTTTTCTATTTTATATTTTTATATTTAATATATATTTGTATATATTTTTATATTATATATAGTATATATGTATAAATATATATACACATATATTATATATGTATAAATATATATACATATATGTGTATATATATACACATATATAATATATGTATAAATATACATACACATATATAATATATGTATAAATATATATACATATATATAATATATGTATAAATATATACACATATATATAATATATGTATAAATATATACACATATATAATATATGTATAAATATATACACATATATAATATATGTATAAATATATACACATATATATAATATATATGTATAAATATATATACATATATAATATATATGTATAAATATATATACATATATATAATATATATGTATAAATATATATACATATATATAATATATATGTATAAATATATATACATATATATAATATATATGTATAAATATATATACATATATATATAATATATATGTATAAATATATATACATATATATATAATATATATGTATATATATTTTTTTTAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCAGTCTTGTCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGTCTCCCTAGTAGCTGGGAATACAGGCAGATGCCATGATACCCAGCTAATTTTTCTAGAGACGAGGTTTCACCATGTTGGTCAAGGCTGGTTTCGAACTCCTGATCACAGGTGAACCACTCACCTTGGCCTCCCAAAGTGCTGAATTAAAGGCGTGAGCCACAACACCCGGCCCATTTATATATTCTTGAAATGACATGACAAAGTATACAGATGGAGATAGATTCATGGTTGCCAGGGGTTCGGGAAGCAAGAGGCATATATGACTGTATACGGGTAGCATGAAGGAGATATTTGTGGTAAGGATCTTGTGCAGTATTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTTTGTCACCCAGGCTGGAGTGCAGTGGCAGGATCTTGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATCCTCCATCTTCAGCCTCCCAAGTAGCTGGAATTGCAGGCATGAGTCACCATACCTAGCTACTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGCTGGTCGTGAACTCCTGCCTCAAGTGATTCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGCACCTGGCCAAGGACTACTGCTTGTGCATTTTCTTGATTATGGTGGTGGTTATATGATTCTACACAATTGCATAGAACTGTACACACACACAAACACACACACACACACAATGAGTGCCTATAGAGGAAAATCTGAATGAAGTCAATGGATTGTACCAATATAAATTTCTGTGTTTAGGCTGGGCCCAGTGGCTCATGCCTGTAATCCCAACACTTTGGTAGGCTGAGGTGGGTGGATCTCTTGAGCCCAGGAGTACAAGAACAGTCTGGGCAACATAAAGAGACCCCATCGCTACTAAAAATACAAAATTAATCAAGTGTGGTGGCACACACCTATAGTCCCAGCTACTGGAGAGACTGAGGTGGTGAGAGGATCACCTGAGCCTGGTGAGTTCGAGGCTGTGGTGAGCAGCGATCGTGCCACTGCATTCCAGCCTGGGCAACAGTGAGACCTTGTCTCAGAAAAAAAAAATTCTGTATTTTTAATTTATACTATATGTAAGATGTAACCATTGAGGGAATGTGGGTGCAGGGTACAAGGGACCTCTGTAAACCATTTTTTGCAACTTTCTAAGAATCTACAATTATTTCAAAATTAAACATCTTTTTAAAAGTAAAGAAATGGAAATAAAATTTTTTTTCTGATGAAAATATGTATATATATTTAGGATTCATCCTCTAGACTCACTTTAGATAGTCTCAATCTTGTTGGCAACACCCAAAGCATGGTAATCAGGAGCCAGTCAAACATATGCCTTCTTCTCTCCATCAGGCCTAATCAGGGTGTTCACCTTGACCACATCAGTGTCATAGAGCTTCTTCACAGCCTGTTTGACCTGGTGCTTGTTGGCTTTAACATCTTCAATGAACACAAGTGTGTTGCTGTAACTGCCCAATGGGTTCATCTTGCCTGCTGCCTAGACAAAGCCAATTTATCAATACAGGGGAATTGCAATAGAGAAAGAGTAATTCATGCAGAGCTGGCTGTGCAGGAGACCAGAGTTTATTATTGCTCAAATGAGTCTCCCTGAGCATTTGGGGATGAGAGTTTTTAAGGATTACTTGGTGGGTGGGGGGCAGCCAGTGAGTCAGGAGTGTGGATTGGTCAGGTCGGAGATGAAATCATGGGAAGTTGAAGCTGTCCTCTTGGGCTGAGTCAGTTCCTGGGTGGGGGTCACAAGATCAGATGAACCCGTTTATCTGGGTAGTATCAGCTGATCCATCAAGTGCAGGGTCTACAAAATATCTCAAGCTCTGATCTTAGGCTTTACAACAATGATGTTATACCCAGGAGCAAATTTAGGAAGGGTCAGAATCTCGTAGCCTCCAGCTGCACAACTCCTAGACTATAATTTCTAATATTTTGGCTAATTTGTTAGTCCCACAAAGGCAGTCGAGTCCCCAGGCAAGAAGGGGTTTGCCTTGGGAGAGGCCTGTTATCACTTTGTTTTTTTTCTTTCTTCTGTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCATTCTTGTTGCCCAGGCTGGAGTGCAATGTCACAATCTCCGCTCACCTCAACCTCTGCCTCCCGGGTTCAAGAGACTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGTTTACAGGCATGAGCCATCATGCCCGGCTAATTTTGAATTTTAGTGGAGAACAGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCTTGACCTCAGGTGATCTGCCTGCCTCTGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCGGCTTCATCTTTGTTTTAAACTATCAACTAAGTTCCTCCCAAAGTTAGTTCAGCCTATGCCCAGGAATGAACAAGGATAGCTTGGAGGTTAGAAGCCAGCTAGAGCTGGTTAGGTCAGATCTCTTTCACTATCTCAGTTATAATTTGGTAATGGTGGTTTCATTGTTGTCTTCTATCTTCTTCATGGCGGACTCAGTGGTCAGAGGAAACTTGATGATAGCATAGTGGTCAAGCTTGTTTCTCCTGGGGGTGCTCTTCCGGAGATATTTGGTCAGTTTCCCGAGTTGCAGTGTCTTGAGCCGCCAGAAGGTGGGTGACGTGCGGATCTTCTTTTTTCTGTGGTTGTGGACACCTTTCAGCACTACCTCTTGGCCTTCAAAGCCTTCGCTTTGGCTTCAGCTTTAGGAGGGGCAGGAGCTTCCTTTTCGCCTTCGGTGCCATCTTGTGAAAAAGCAAAAATAAAGTTTTTTAAAAGGGCATCCAAATTTAGTGAAGTCCTATATCCATTGTTGACAGTGCGAAAGTGCAAGCTTCCTTTTCTCTATCCAGGAGCAGGAGCAGTACAGTCTTCACTTGAAGTCCAGTAGCCTAATTATTATAGGCTATGTACCCTCTAAACCTGATTATAAGCCTCTCTTGGACATTTGAGAAGCTGCTCAACATCTTAATAAATTCCTTTTCAAGTTAAACTAGACACTGCGTGTTCTGTTGTTTGCAGCTTTCAATACTGGCCACTTTTTATTGTAATAGTTTCAATCGCCTGTCTTTGTCTCCTGAGGGATATGGGAGAGTGATAAGTACAGCTAAAATGTATCTCTACACACTGAAGCCACTGAAGAAATTGGTATAAAGATAGAAATTAATAAATTGATATTCAATCTACTTCAAGAATGTCTTTGTTAATGCCACTGACTATAGCCTCTTGGGCACTTCTAGAAGCAGAGAGACGGGTCTATGCTGCTTTATGATTATTAATGCTCCTCACTTTCTTTTTTTTTTAGATGGAGTTTTGCTCTTGTTGCTCAGGCTGGAGTGCAGTGACAGGCTCGCAGCTCACTGTATTCTTCTGTGTCTAGAACACAAATTCTGCTTCTATACCTCATTAAGGTAATGATGATGCACTGCCCTCCCTCAAGACCCCTAATCACAGCCCATAGTGGTTCTCAGATGAAAGGGCTACTGCGTGCAAATCCCTCCTGATGTTAAGTGTGGTTTATATAAGTTCCCTGAAAGAGGGCTGTTGAAGAAAGCTTTATAACTATCCTATGTTATAGGAAGATTAGGGGTAGACAAGGGGACAAGCAAGGGACTGGGAAGAAAGCAAGAGAAAATAACAAAACATATAGTTCAAATAACAGAAATAAGATTTATAGAAATTATTTTGGCCTAAGAAAAGAAGGAGAAAGAGATCCAGGGCAGGATCTTTAAGGATCTCACAGGCAATATTTCCCCTATTATCCTTATTATGACTTTGTATTAAATGTATATGTGGGTGGGGATCCTTGCTGGTATTGGGACTTTATACTTAATTTATTCAAGTTATTCTATGAAGAAATTAATTTACAAAGCTTACAAAAACAGAACTACATGAACAACTTCAATTGAATGAAATTTTACCTTAGTCCAAAATAGAAATGGCCAGTTTTATTATACATCTTTCTCTTGATCCCAGTTTTATATTTGAGATTAAAATGTATCTACAAAAGCACTTTAAAACAATTAAGATGATGGAGGGAATTGTTAGAGGTACACATGAAACCACCTTTGCAAAATTATGACTGAGACAGGGAAAGAGATTTAACTTAAGCGACTCCATCTCACTTTTAACCTCCAAGCTGTCCTTGTTCATTCCTGGGCGTAGGCTGAACTAACTTTGGGAGAAACTTAGTTTGTAGTTTATCGTTTAAACAAAGATGGTAACAGCCCTTTCCCAAAGCAGATCTCCTTCTTGCCTGGGGACTAGATCGCCTTTGTAGAACCAACATTAGCCACAAGAGCAGAAATTATGGTTTAGGAGTCATGCAGCTGGAGGCTACAAGATTCTGACCCTCCCTAGACTGCTCCTAAGATCAATGCTTGACTATTTTGCAGACCCTGCACTTGATGGATCAGCTGGCACCACCCGGATTAATAAACTGGCTCATCTGATCATGTGGCCCCCAACCCAGGAACTGACTCAGCACAAGACAGCTTCAACTCCCTGTGATTTCATCTCTGTCAAATCAGCACTGCTGGCTCACTGGCTTCCCCCACCCACCAAGTTATCCTTAAAAACTCTGCTCTGGAATGCCCAGGGAGACTGATTTGAGTAACAATAAAACTCCCATCTCCCTCACAGCCAGCTCTGCGTGAATTATTCTTTCTCTATTGCAAATCCCCTGTCTTGAATTGGCTCTGTCTAGGCAGCCAGCAAGGGAAACCCCTGGGCTGTTACACACATGCTATGACTTGCATAATGGTTTCTCCTTCAAAGTTTTGTCATTGTTTCTGGTCTATCTTCTAAAAATTTCACCATCAGAAATTAAGACTTTTGAGAAAAACAAAAAACAAAACCAAAACTCCCAGAGAAATTGGAGTAGCTCTGGGTATGCCAAAGACCACCATTAATCATCATTCCCTACTTTTCTTTCATACTTTCCAGTTTGGAATCTACTATAACATCCGTTGTTTCTCATTATGATTTTGATTTGTTACAACCTTGAGAAAGAGGTAGAGACTTAAATTATTATCAAAAATGTTTTAATGAAAAAGATGAAGCTCAAAGAGGTTAAGTGACTTGCTCAAGGTCACAGAGCAGTAAAAAAATCTCATCTCCCACATGAGAAACAGAGTAAGCCTGCTGTCCTCTCTAATACTAACACATCAACTGAGAGAAACGAGAGCCCTGGGGAATTTTCTCTAATCACCCCACATTAGCTGTGTAGCACAGATTGCTTTCCACTTCTCAAATCCCATTGCACTTGCCATCTGCAAAATTCACTTGAGTTCTTCCTCATATTTTGCCTTGTCTTGCTTTTAAGTGCTTAGTAAGTTAATAGGTAAATGGTGTGTGTGTGTGTGTGTGCATGTGCGTGTGCATCCGCACTCGTAACCTCCAATTATATAGTCCAAGTATTAGAAACACAAATTAGACTTGTATTCTCACAAAATTTAGCACAGTATCATCCTTATGAAAAAATTAATTTGTATATTAATTTAATTAATCTAATTTAACTATTCTCTAATCTAGAAAATAGCATGGAAAATACAGACTTTGACCCTAAGAAGGTATAGAGAAAAGGACAATCTTAGTAGAAGTGGGTCAGACACTTTCTTGCCTATTGAGTCTACCACTATTATTTTAACCGTTCTTTTGCCAACACACTTCGCACACCTTGTTCTTCCTGTTGCACATTCCCACCTCAACCATAACCCTGGATCAACCTTAAAGTCAGCCTCCTTCTCTCCTTACATTTGTTAGTCTAGAGACAAGATTACAGGCAAGTCTGGGCGTGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCAAGACGGGTGGATCACTTGAGGTCAGGAGTTCGTGACCATCCTGACCAACATGGTGAAACTCCATCTCTATTAAAAATACAAAAAATTAGCTGGGGATGATGGTGGGCACCTGTAATCCCAGCTACTGGGGAGGCTGAGCCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGCAATAACGCCACTTTACTCCAGCCTGGGCAACAGCAGTGAAACTCTGTCAAAAAGAAAGCAAGAAAGCAAGCAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGGAGAGAGGGAGGGAGGGAAAGGTTACAAGCAATGGAACTTACACTTGCTTAAATAATAAAGTATATTTGGACTGAAAAGTCCAAAGGTAAAACTGACTTCAAATGAAGCTTGATCTTGCAGCTCAAATGATGTAAAAGCAAGTTTCTTTTTGTCTTTCCACTCTGCTTTTTTCAGGCTTGGCTTCATTCCCAGGCCAAGCCCTGACTATCATAAGAAGCCTGCTACCCAATCCTTTTGCTTTCATTTTCAGCAGGGAAAAGCAAAAATGTGACCCAGTGTTCACAGTAAAAACCCTAAGTCATGTGCCCACCATTTACCTAATTCCTCAGGCCAGGTAAATGGGATAAACTGATAAGCTTAAACTCAGTTCTGTGTCTCACATTAAAGCTGGAAATTGAATCAATTTCCCTAAAATCACATGGATCTTCAAATGGAAATTAGTAGCTACTGGAAAGGAGGAAATAGATTTAATTAACACATGTCCTCCATTTTTATTTTTCTTGGCTAGTAGGTGTCAACAGAAGAAATCAAACAACTCTGTGGAATTCACCAATGAAAATTTATGATCTCCCATGTCTGCAGAATTATTACACTAATTACTCTCCCCTCACTCACCTCACTCACTTTTCACTCTCTGCAAGGTATTTTTCCTCAGTTTATTAACTTGATCAAGCATCTCTCTTCATAAAAATGAAAAATAAAGGTCACTGAAACCAATGCCTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTAGAGTGCAGTGGTGTGATCTCCGCTCACTGCAACCTCTGACTCCCAGGTTTAAGCAATTCTCCTACCTCAGCCTGCCCAGTAGCTAGGACTACAGATGTGTGCCCCCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGAGGTTTCACAATGTTGGCCAGGCTGGTCTCCAACTTTTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCCACTGTGCCTGGTCACCAATGCCATTTAACTGCTATCCTGTTTACCTCCCCTCACAGCCAAGCCCTTGCATTCTATATACAATGTAAACCATGTTAAAGTGAGACAAAAATAAGATCACTGTGCAACCCACAAAACATTGAACAACCTTCTCTCCCAGCCAAGGTAAGTGACTGGTATTTCCTTACTAATCCTTCCTGTAGTCTCCCCTTTCTATAGATAAGATTTATTGAGATACTTAATCATAGAATTGCCTTCACTTTTTGATAGTGAGTAACTCTGTTTCCTCAGACTCTCCCCAAAATTATCCAATGGAAGGTCAAACCCTTTAAATAGGTTCTAACATCTTCTAACTGAAATGCGTCTCACTTCCCCATGAGGAGAGCTCTCCCCATTTACGACAGTAATAAAACCAACTTGTTCAACTAAAGGTGTGTTCCTGGTGGTCTTTGGCTAGAGGGCGTTTGCAGTCCTCACTGTATTAGTTGCAGTATCAATTGAAATCCATTGAAGCATCCTTCGTTTCTCTCTGAGTTATTCCAACATCTTCCAAATGGTTTTCCCTGTCACCAGTCTTATTTTCTCCAATTGATTCCCAGACTCCTTGCTAAAGTGATCTTTTCAAAACTCAGATCTGATTATGTCACTCGTTGCCCCCATATTCCTAAGAATAAAGTCCAGATACAATAGCCTGGCCTGTGACATTCTTCTTGATCTAGTTCCCTAACCACACCAGTTTTATCAGTCACCACCACCTCCCTAACTCCAGTTCCATGCACCAGCCTTGACGAACTTGCTTGCAGCCCTTCCAAAACATTTGTCTGAACTCTAGAATGTCCTTTGGACCTCTCCTGATGCCTAGAATCTTCATCTAGCTAACTTTTACTTGTACTTAAAGACTTACCTCAAGCATTTCTCATTCAAGCATTGAGAAGCCTTCTAGAATATTCCCAGAAGTCACTAGTTTGTATGTGATACTCACATTGCACTGTATTATTGTTTTCCTTATGAGATTATCAACTTCTTGAGGTCTAGAATTTTGTTATTCATCCTGATGTTCTCTTGCAGTGGACTCTACTCAAGGTTCTTCTTCTGCAATGTTTGAGAACAGAAATTGTGGTGTGAGACATTCTTCTGCTATTCCTGGAAATGGAAGTGGGGGTTGGGAGTTAGGATGCTCAGATATTGGGGACTGCTTTGTGGGTGAAGCCCAGAAATAGTAAATGTCTTGCAATATACTGGACAGTTCTGCACAAAGAACTATCTCACCCAAAATGCCAATAGCACATCCATTAAGAAACACCATAGTTTCTCAATAAGTGTCTGCTTAGGAATGAATAAATGAACATAAATGAATAAGTAAAATAAAGTAAAAATGAAAGAATACATTAATGAATAACTGAAGGGGAAAAAGCAGCCTGACCATTTAGAGATGAAAGTGTACCCTAAGGAGAGACACCGATGGGAAATTCATGACTTGACAACTTAAAATTTTGTCTTTGTTATTTTCTTAGCCCTTTTCCCCTAGAGCTGTGACTGCAAGGTGCAATCTGAATTGAAAGAACTAATTAAAGTGAGGCTGGGCATG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4264:HG4_PB_pbsv_7053:HG2_PB_SVrefine2Falcon1plusDovetail_10328:HG2_PB_PB10Xdip_26113:HG2_PB_PB10Xdip_26114:HG4_PB_SVrefine2Falcon1Dovetail_4260:HG2_PB_SVrefine2PBcRplusDovetail_9614:HG2_PB_SVrefine2Falcon2Bionano_3546:HG2_PB_SVrefine2PB10Xhap12_5155:HG4_Ill_SVrefine2DISCOVARDovetail_5214:HG4_PB_SVrefine2PBcRDovetail_3483:HG3_Ill_SVrefine2DISCOVARDovetail_5349:HG3_PB_SVrefine2PBcRDovetail_3251:HG2_Ill_SVrefine2DISCOVARplusDovetail_11271;NumClusterSVs=14;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_3483;NumExactMatchSVs=1;ClusterMaxShiftDist=0.156404;ClusterMaxSizeDiff=0.156203;ClusterMaxEditDist=0.243878;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=10264;DistBack=79874;DistForward=43;DistMin=43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=285;REFWIDENED=6:82969646-82969930;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9828;PctRecOverlap=0.9827;SizeDiff=177;StartDistance=-35;EndDistance=-35;GTMatch=0;TruScore=98;MatchId=4716.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:91:1/1:0:25:0:7:./.:0:0:0:0:1/1:0:41:1/1:0:693:.:10365:.
chr6	83407723	HG2_Ill_150bpfermikitraw_9320	A	AATACATATATATGTATATATATATAAATACATATATATGTATATATATATAAATACATATATATGTATATATATATATACATATATATGTATATATATAAATAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3253:HG4_PB_SVrefine2Falcon1Dovetail_4261:HG2_PB_SVrefine2Falcon1plusDovetail_10330:HG2_PB_PB10Xdip_26116:HG2_PB_PB10Xdip_26115:HG3_PB_HySA_10822:HG4_Ill_GATKHC_11854:HG4_Ill_GATKHCSBGrefine_4994:HG3_Ill_GATKHC_11773:HG3_Ill_GATKHCSBGrefine_4868:HG3_Ill_250bpfermikitraw_9597:HG3_Ill_150bpfermikitraw_9360:HG2_Ill_GATKHC_11818:HG2_Ill_250bpfermikitraw_9910:HG2_Ill_150bpfermikitraw_9320:HG2_PB_HySA_13065:HG2_PB_pbsv_7059:HG4_PB_pbsv_7055:HG4_Ill_SVrefine2DISCOVARDovetail_5217:HG3_PB_SVrefine2Falcon1Dovetail_4267:HG3_Ill_SVrefine2DISCOVARDovetail_5351:HG2_PB_SVrefine2PBcRplusDovetail_9616:HG2_PB_SVrefine2PB10Xhap12_5157:HG2_PB_SVrefine2Falcon2Bionano_3548:HG2_Ill_SVrefine2DISCOVARplusDovetail_11274:HG4_PB_SVrefine2PBcRDovetail_3485;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9320:HG2_Ill_250bpfermikitraw_9910:HG2_Ill_GATKHC_11818:HG3_Ill_150bpfermikitraw_9360:HG3_Ill_250bpfermikitraw_9597:HG3_Ill_GATKHCSBGrefine_4868:HG3_Ill_GATKHC_11773:HG4_Ill_GATKHCSBGrefine_4994:HG4_Ill_GATKHC_11854;NumExactMatchSVs=9;ClusterMaxShiftDist=0.146341;ClusterMaxSizeDiff=0.135922;ClusterMaxEditDist=0.356808;PBcalls=14;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=104;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=7283;REFWIDENED=6:83407643-83414836;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4717.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:75:./.:2:15:0:1:./.:0:0:0:0:1/1:0:50:./.:.:.:.:.:.
chr6	83501725	HG2_Ill_SpiralSDKrefine_14869	A	AGAACTTCATTTTTTGAAAAGATAAACAAAATTGACAAATCTTTGGCCAGACT	20	PASS	ClusterIDs=HG3_PB_pbsv_6858:HG2_PB_pbsv_7060:HG2_PB_PB10Xdip_26118:HG2_PB_PB10Xdip_26117:HG4_Ill_svaba_9227:HG4_Ill_scalpel_6857:HG4_Ill_manta_1768:HG4_Ill_Krunchall_10514:HG4_Ill_GATKHC_11858:HG4_Ill_GATKHCSBGrefine_4995:HG4_Ill_FB_6523:HG4_Ill_250bpfermikitraw_9924:HG4_Ill_150bpfermikitraw_9516:HG3_PB_assemblyticsfalcon_23204:HG3_Ill_svaba_9216:HG3_Ill_scalpel_7112:HG3_Ill_manta_1677:HG3_Ill_Spiral_7772:HG3_Ill_Krunchall_9945:HG3_Ill_GATKHC_11775:HG3_Ill_GATKHCSBGrefine_4869:HG3_Ill_FB_6417:HG3_Ill_250bpfermikitraw_9599:HG3_Ill_150bpfermikitraw_9362:HG2_PB_assemblyticsfalcon_23331:HG2_PB_assemblyticsPBcR_22562:HG2_Ill_svaba_9138:HG2_Ill_scalpel_7026:HG2_Ill_manta_2035:HG2_Ill_SpiralSDKrefine_14869:HG2_Ill_Krunchall_10192:HG2_Ill_GATKHC_11819:HG2_Ill_GATKHCSBGrefine_4923:HG2_Ill_FB_6498:HG2_Ill_250bpfermikitraw_9912:HG2_Ill_150bpfermikitraw_9322:HG2_PB_HySA_13067;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9322:HG2_Ill_250bpfermikitraw_9912:HG2_Ill_FB_6498:HG2_Ill_GATKHCSBGrefine_4923:HG2_Ill_GATKHC_11819:HG2_Ill_Krunchall_10192:HG2_Ill_SpiralSDKrefine_14869:HG2_Ill_manta_2035:HG2_Ill_scalpel_7026:HG2_Ill_svaba_9138:HG2_PB_assemblyticsPBcR_22562:HG2_PB_assemblyticsfalcon_23331:HG3_Ill_150bpfermikitraw_9362:HG3_Ill_250bpfermikitraw_9599:HG3_Ill_FB_6417:HG3_Ill_GATKHCSBGrefine_4869:HG3_Ill_GATKHC_11775:HG3_Ill_Krunchall_9945:HG3_Ill_Spiral_7772:HG3_Ill_manta_1677:HG3_Ill_scalpel_7112:HG3_Ill_svaba_9216:HG3_PB_assemblyticsfalcon_23204:HG4_Ill_150bpfermikitraw_9516:HG4_Ill_250bpfermikitraw_9924:HG4_Ill_FB_6523:HG4_Ill_GATKHCSBGrefine_4995:HG4_Ill_GATKHC_11858:HG4_Ill_Krunchall_10514:HG4_Ill_manta_1768:HG4_Ill_scalpel_6857:HG4_Ill_svaba_9227;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0943396;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.165138;PBcalls=8;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=29;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=9490;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=6:83501724-83501726;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4718.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:94:./.:0:5:0:2:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr6	83854923	HG4_Ill_150bpfermikitraw_9519	A	AATATATATAATATGTATATATAATATATATATAATATGTATATATAATATATATATAATATATATAATATATATAATATATATATAATATATATAATATATATATAATATATATATTATATATATTATATATATAATATATATATAATATATATATAATATATATATAATATATATATTTAAAAGTATATATATATAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10333:HG3_PB_HySA_10828:HG2_PB_HySA_13074:HG3_PB_assemblyticsfalcon_23209:HG3_PB_SVrefine2PBcRDovetail_3255:HG2_PB_SVrefine2PB10Xhap12_5162:HG2_PB_assemblyticsPBcR_22568:HG2_PB_SVrefine2PBcRplusDovetail_9619:HG4_Ill_MetaSV_4575:HG4_Ill_250bpfermikitraw_9929:HG4_Ill_150bpfermikitraw_9519:HG2_Ill_GATKHCSBGrefine_4925:HG3_Ill_GATKHCSBGrefine_4871:HG3_PB_SVrefine2Falcon1Dovetail_4270:HG4_PB_pbsv_7060:HG2_Ill_MetaSV_4393:HG3_Ill_MetaSV_4575:HG2_PB_HySA_13073:HG4_PB_HySA_10432:HG2_PB_pbsv_7064:HG3_PB_pbsv_6862:HG4_PB_SVrefine2PBcRDovetail_3488:HG4_Ill_SVrefine2DISCOVARDovetail_5222:HG2_Ill_SVrefine2DISCOVARplusDovetail_11278:HG4_PB_SVrefine2Falcon1Dovetail_4264:HG3_Ill_SVrefine2DISCOVARDovetail_5357:HG2_PB_SVrefine2Falcon2Bionano_3551:HG2_PB_SVrefine2PB10Xhap12_5161;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4925:HG4_Ill_150bpfermikitraw_9519:HG4_Ill_250bpfermikitraw_9929:HG4_Ill_MetaSV_4575;NumExactMatchSVs=4;ClusterMaxShiftDist=0.154613;ClusterMaxSizeDiff=0.154613;ClusterMaxEditDist=0.214464;PBcalls=18;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=198;DistBack=-28;DistForward=3;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=134;REFWIDENED=6:83854827-83854960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4719.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:1/1:2:31:1:25:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr6	85929800	HG4_Ill_GATKHCSBGrefine_4998	A	AGATTTTCTCAGACAAATAAAAACAGGGATTTCATCAACACCAGACCTATCCTATAAGAAATGTTAAAAGAAGTTTTTCAATATGAAAGTAAATGATGTTAAT	20	PASS	ClusterIDs=HG3_PB_pbsv_6868:HG2_PB_pbsv_7069:HG2_PB_assemblyticsfalcon_23350:HG2_PB_PB10Xdip_26124:HG2_PB_PB10Xdip_26125:HG2_PB_HySA_13085:HG4_Ill_manta_1771:HG4_Ill_MetaSV_4578:HG4_Ill_GATKHCSBGrefine_4998:HG3_Ill_Spiral_7783:HG3_Ill_GATKHCSBGrefine_4876:HG2_PB_SVrefine2Falcon2Bionano_3555:HG2_PB_SVrefine2Falcon1plusDovetail_10337:HG2_Ill_manta_2039:HG2_Ill_SpiralSDKrefine_14879:HG2_Ill_SVrefine2DISCOVARplusDovetail_11291:HG2_Ill_GATKHC_11846:HG2_Ill_GATKHCSBGrefine_4928:HG2_10X_SVrefine210Xhap12_5036:HG2_PB_SVrefine2PB10Xhap12_5165:HG3_PB_SVrefine2PBcRDovetail_3257:HG4_PB_pbsv_7066;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5036:HG2_Ill_GATKHCSBGrefine_4928:HG2_Ill_GATKHC_11846:HG2_Ill_SVrefine2DISCOVARplusDovetail_11291:HG2_Ill_SpiralSDKrefine_14879:HG2_Ill_manta_2039:HG2_PB_SVrefine2Falcon1plusDovetail_10337:HG2_PB_SVrefine2Falcon2Bionano_3555:HG3_Ill_GATKHCSBGrefine_4876:HG3_Ill_Spiral_7783:HG4_Ill_GATKHCSBGrefine_4998:HG4_Ill_MetaSV_4578:HG4_Ill_manta_1771;NumExactMatchSVs=13;ClusterMaxShiftDist=0.193878;ClusterMaxSizeDiff=0.192893;ClusterMaxEditDist=0.284264;PBcalls=11;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=102;DistBack=1;DistForward=25300;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6542;REFWIDENED=6:85929797-85921183;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:39:0|1:25:2:1:37:./.:0:0:0:0:0/1:32:19:./.:.:.:.:.:.
chr6	88042441	HG3_Ill_manta_1682	T	TTGTTTTTCTTCCCAATGAACAACTTTAATCTGTTTTCTATAGGCTATCTTTGTTTTAAATACACACAGCTGTTTTCCAATAATAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_7078:HG4_PB_pbsv_7076:HG3_PB_HySA_10847:HG3_PB_SVrefine2PBcRDovetail_3261:HG3_PB_pbsv_6873:HG2_PB_assemblyticsfalcon_23363:HG4_Ill_svaba_9261:HG3_Ill_svaba_9246:HG3_Ill_Spiral_7791:HG3_Ill_250bpfermikitraw_9629:HG2_PB_assemblyticsPBcR_22593:HG2_PB_SVrefine2PB10Xhap12_5171:HG2_Ill_svaba_9175:HG2_Ill_SVrefine2DISCOVARplusDovetail_11300:HG2_Ill_250bpfermikitraw_9946:HG2_10X_SVrefine210Xhap12_5048:HG4_Ill_manta_1776:HG4_Ill_SVrefine2DISCOVARDovetail_5243:HG4_Ill_Krunchall_10555:HG4_Ill_GATKHCSBGrefine_5004:HG3_Ill_manta_1682:HG3_Ill_SVrefine2DISCOVARDovetail_5368:HG3_Ill_Krunchall_9974:HG3_Ill_GATKHC_11810:HG3_Ill_GATKHCSBGrefine_4881:HG2_Ill_manta_2044:HG2_Ill_Krunchall_10232:HG2_Ill_GATKHCSBGrefine_4933:HG2_PB_PB10Xdip_26131:HG2_PB_PB10Xdip_26130;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4933:HG2_Ill_Krunchall_10232:HG2_Ill_manta_2044:HG3_Ill_GATKHCSBGrefine_4881:HG3_Ill_GATKHC_11810:HG3_Ill_Krunchall_9974:HG3_Ill_SVrefine2DISCOVARDovetail_5368:HG3_Ill_manta_1682:HG4_Ill_GATKHCSBGrefine_5004:HG4_Ill_Krunchall_10555:HG4_Ill_SVrefine2DISCOVARDovetail_5243:HG4_Ill_manta_1776;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.241379;PBcalls=10;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=86;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=6:88042442-88042443;PctSeqSimilarity=0.9943;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4721.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:81:1/1:0:26:2:50:./.:0:0:0:0:1/1:0:50:./.:.:.:.:.:.
chr6	88579090	HG3_Ill_GATKHC_11812	G	GTCTTATGGGTGATTATGTCATGACACAAAGTGTTCTCCTGATCTTATCTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5051:HG2_PB_pbsv_7082:HG3_PB_HySA_10848:HG4_PB_HySA_10456:HG4_Ill_svaba_9267:HG4_PB_pbsv_7081:HG4_Ill_scalpel_6880:HG3_PB_pbsv_6875:HG4_Ill_Krunchall_10561:HG4_Ill_GATKHC_11906:HG4_Ill_GATKHCSBGrefine_5009:HG4_Ill_FB_6555:HG4_Ill_250bpfermikitraw_9963:HG4_Ill_150bpfermikitraw_9552:HG3_Ill_svaba_9249:HG3_Ill_scalpel_7135:HG3_Ill_Krunchall_9976:HG3_Ill_GATKHC_11812:HG3_Ill_GATKHCSBGrefine_4883:HG3_Ill_FB_6436:HG3_Ill_250bpfermikitraw_9631:HG3_Ill_150bpfermikitraw_9392:HG2_Ill_svaba_9181:HG2_Ill_scalpel_7050:HG2_Ill_Krunchall_10237:HG2_Ill_GATKHC_11869:HG2_Ill_GATKHCSBGrefine_4937:HG2_Ill_FB_6527:HG2_Ill_250bpfermikitraw_9951:HG2_Ill_150bpfermikitraw_9361:HG2_PB_PB10Xdip_26135:HG2_PB_PB10Xdip_26134:HG2_PB_HySA_13114:HG4_Ill_SVrefine2DISCOVARDovetail_5247:HG3_PB_SVrefine2PBcRDovetail_3262:HG3_Ill_SVrefine2DISCOVARDovetail_5370:HG2_PB_SVrefine2PBcRplusDovetail_9628:HG2_PB_SVrefine2PB10Xhap12_5174:HG2_PB_SVrefine2Falcon2Bionano_3561:HG2_PB_SVrefine2Falcon1plusDovetail_10345:HG2_Ill_SVrefine2DISCOVARplusDovetail_11304;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9361:HG2_Ill_250bpfermikitraw_9951:HG2_Ill_FB_6527:HG2_Ill_GATKHCSBGrefine_4937:HG2_Ill_GATKHC_11869:HG2_Ill_Krunchall_10237:HG2_Ill_scalpel_7050:HG2_Ill_svaba_9181:HG3_Ill_150bpfermikitraw_9392:HG3_Ill_250bpfermikitraw_9631:HG3_Ill_FB_6436:HG3_Ill_GATKHCSBGrefine_4883:HG3_Ill_GATKHC_11812:HG3_Ill_Krunchall_9976:HG3_Ill_scalpel_7135:HG3_Ill_svaba_9249:HG4_Ill_150bpfermikitraw_9552:HG4_Ill_250bpfermikitraw_9963:HG4_Ill_FB_6555:HG4_Ill_GATKHCSBGrefine_5009:HG4_Ill_GATKHC_11906:HG4_Ill_Krunchall_10561:HG4_Ill_scalpel_6880:HG4_Ill_svaba_9267;NumExactMatchSVs=24;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.35514;PBcalls=13;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=50;DistBack=-46;DistForward=51;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=6:88579087-88579146;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4722.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:1:34:1:30:./.:0:0:0:0:1/1:2:57:./.:.:.:.:.:.
chr6	88698067	HG3_Ill_MetaSV_4581	G	GCCCCTTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACTCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCAGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGTCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_13117:HG3_PB_pbsv_6876:HG3_PB_HySA_10851:HG4_PB_SVrefine2Falcon1Dovetail_4272:HG3_PB_SVrefine2Falcon1Dovetail_4277:HG2_PB_SVrefine2Falcon2Bionano_3562:HG4_Ill_MetaSV_4588:HG4_Ill_GATKHCSBGrefine_5011:HG3_Ill_MetaSV_4581:HG3_Ill_GATKHCSBGrefine_4884:HG2_Ill_SVrefine2DISCOVARplusDovetail_11305:HG2_Ill_MetaSV_4401:HG2_Ill_GATKHCSBGrefine_4939:HG2_PB_assemblyticsfalcon_23370:HG2_PB_SVrefine2Falcon1plusDovetail_10346:HG3_PB_SVrefine2PBcRDovetail_3263:HG3_PB_HySA_10850:HG4_PB_pbsv_7083;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4939:HG2_Ill_MetaSV_4401:HG2_Ill_SVrefine2DISCOVARplusDovetail_11305:HG3_Ill_GATKHCSBGrefine_4884:HG3_Ill_MetaSV_4581:HG4_Ill_GATKHCSBGrefine_5011:HG4_Ill_MetaSV_4588;NumExactMatchSVs=7;ClusterMaxShiftDist=0.122383;ClusterMaxSizeDiff=0.122383;ClusterMaxEditDist=0.180937;PBcalls=11;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=5002;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=6:88698068-88698077;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4723.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:32:0|1:40:0:0:29:./.:0:0:0:0:0/1:21:7:0/1:6:38:.:.:.
chr6	90582101	HG3_PB_SVrefine2PBcRDovetail_3271	T	TAGCCGGGCACAGTGGCGGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAGAGATGGAGTCTCATTATGGTGCCCAGGCTAGATTTGAACTCCTGAGCTGGCTTAGATTTACTTTTTGAGTGTTAGAATATGTAGATATTTATTAGCCAGCCTCTTTAAAAGTATGGCTCAGCGTAGGACTGTTAAAAACTTGTTAACTGTGGAAGAAGTATGACTGAGACAATCCTGATTGTTTTGTAAACTGATGTTTGCTTGTTTAAGAAATATTAATGTTTGTAATCCCAGCACTATGGAAGGCCGACTGGGAGGATTGCTTCGGCCCAGGTTATAGTAAGCTATGCTCTTGACACTGCACACTCCAGCCCGGGTGACAGCAAGACTCTGTCTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCACGTCTCTACTAAAAATACAAAAAAAATTAGCCAGGTTTGGTGGCTTATGCCTATAATCCCAGCTACTCAGGAAGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCATGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCCATCTCAAAAAAAAAAAAAAAGTTCAATATTGAAAAGTTAACTAGTAATCACCTTTAGTATGAAGATATTTTTCTTTTTTTTTTTTTTAAGACGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCGATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCACCATACCTGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCGTGTTGGTCAGGCTGGTCTTGAATTCCCGACCTCAGGTAATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACACCTGGCCATGAAGATATTTTTCTAAACATTAGTTCATCTCTTTATTATTGAAGATGACTTTGTCTGTCTTTAGCTGTCTTACGAAAGTATTCTTCAAAGATGAAAAAAGATTACTGAGGTATTTGTAATTAACATTCATTTTTAAATTTTCAGGTCTCAGAAAGATTCCAGCAGCTAATGAAGCTCTTTGAAAAGTCAAAATGCAGGTAGTTAATGGTTACACTACAGGAGACTAGTAAAATAAATGTTTGACACTGTAGTTGTGCAGTTAATGGCCTGTTAGTCATTGAAGATGTGAATAGTGGGTGAGAGACATCCAGTTGAGTTCCTGCTTCAGTCACAGGTTGGAGGATGATTGCTCGAGCAGGCATCTAAGGTGACCTCATCCACAGGGACGTGCTCAGAGTGAAGCCTGCTGCAGTTCAGATCAGCATGGCATCTCTCCTCAACCTTCTGATTGCTGATGAGTCTAAGGTGGGGGGAAATCCATTTGATTAATAATAAAGTTTTTATAGATAAATCAAACATTCTTGAAAAGCAGAATGTGGTTCATAAGCAGTGAAGTCTGTGTAGTGATGGTAATTTAATGTTTCTCACATTTTTAATTAGTGCTAATTAAAATACAAAACATTTATAAAGTTTGTCATCCCAATTGATGACATGATTTACCATATTAAATTGTTAATAATGTTCACAGACATGTTTCCTCAGTTTTTGTTTTTGTACTTGTCGTACAAGTCTTTCTTGTACATACAGGTTTATTAGGGCAATAATATTTAAATTATCAGCAGAAGGCTGGGTGTGGTGGTACCCACCTATAGTCCCAGCTACTCGAGAGGCTGAGGCAAGAGGATTGCTTGAGCCCAGAAATCTGAGGCTAGGGTACTAGGATTGTGCCTGTGAATAACCAATACACTCCAGCCTGGGCAATATAGTGAGATCCAGTCTCTAAAACCTAAGTAAGTAAATAAATTACCAGCAGGTTTTTTCTGTAGGATCTCTGCCAATTGCTTAAATATTTTGGATTTTTATGTAAGCAAAATTTTAAAGATATTTAATGTATCACAATATTTTTAATTGATTTGCTGTCCTAATTATTTGAATGCAAAACATGCAGTTTTAAATGAAGTTTGAATTAAATCTGAATAGCAACTATATTTGGACATACAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5063:HG3_PB_pbsv_6884:HG2_PB_pbsv_7092:HG4_PB_HySA_10471:HG2_PB_HySA_13135:HG2_PB_PB10Xdip_26157:HG2_PB_PB10Xdip_26158:HG2_PB_assemblyticsPBcR_22614:HG2_PB_assemblyticsfalcon_23386:HG4_PB_HySA_10470:HG3_PB_HySA_10874:HG2_Ill_SVrefine2DISCOVARplusDovetail_11311:HG3_Ill_SVrefine2DISCOVARDovetail_5376:HG3_PB_SVrefine2PBcRDovetail_3271:HG2_PB_SVrefine2PB10Xhap12_5183:HG2_PB_SVrefine2PBcRplusDovetail_9636:HG2_PB_SVrefine2Falcon2Bionano_3569:HG3_PB_SVrefine2Falcon1Dovetail_4285:HG4_PB_pbsv_7092:HG4_PB_SVrefine2Falcon1Dovetail_4280:HG4_Ill_SVrefine2DISCOVARDovetail_5254:HG4_PB_SVrefine2PBcRDovetail_3505:HG2_PB_SVrefine2Falcon1plusDovetail_10353;NumClusterSVs=23;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_3271;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0523538;ClusterMaxSizeDiff=0.0510872;ClusterMaxEditDist=0.25593;PBcalls=19;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=2338;DistBack=65658;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:90582102-90582117;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.997;PctRecOverlap=0.9966;SizeDiff=-7;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=4724.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:17:0:20:./.:0:0:0:0:1/1:0:38:1/1:13:367:.:2284:.
chr6	92768742	HG2_PB_SVrefine2Falcon2Bionano_3573	G	GAAGAACAGAACACTTGGAGAATTGTAATGCCATAGAAAAGAAAAGGCTTGTAATCCCAGCACTTTGGGAAGCTGAGACCGGTGGATCATGAGGTCAGGAGTTTGAGACCAGCCTGACCAAAAGAACAGAACATTTGGAGAATTGTAATGCCATAGAAAAGAAAAGGCTTGTAATCCTAGCACTTTGGGAAGCTGAGACAGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGACCAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10358:HG2_PB_pbsv_7099:HG2_PB_PB10Xdip_26169:HG2_PB_HySA_13150:HG3_PB_pbsv_6895:HG2_PB_SVrefine2PB10Xhap12_5187:HG2_PB_SVrefine2Falcon2Bionano_3573;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3573:HG2_PB_SVrefine2PB10Xhap12_5187;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0493827;ClusterMaxSizeDiff=0.0411523;ClusterMaxEditDist=0.27572;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=240;DistBack=109875;DistForward=239;DistMin=239;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=359;REFWIDENED=6:92768743-92769101;PctSeqSimilarity=0.998;PctSizeSimilarity=1;PctRecOverlap=0.9461;SizeDiff=0;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=98;MatchId=4725.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:49:1|0:8:34:18:3:./.:0:0:0:0:./.:3:4:./.:.:.:.:.:.
chr6	93576129	HG2_PB_HySA_13156	C	CAGCATAAAAAGACTGTATGGCGGCGCGTGGCTCACGCCTGTAATCCAGCACTTTGGAGCCGAGGGCGATCACGAGGTCAGGAGATTGAGACCATCCGGCAAAAGGTGAACCCCGTCTCTACTAAAAAAATACAAAAATTAGCCGGGTAGTGGCGGGCGCTTGGTCCAGCTACTTGGAGGCTGAGCAGAGAATGCGTGAACCCGGAGGCGGAGCTTGCAGTGAGCCGAGATCCGCCACTGCACTCCAGCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_13156:HG2_PB_pbsv_7103:HG4_PB_pbsv_7102:HG4_PB_SVrefine2Falcon1Dovetail_4286:HG2_PB_assemblyticsfalcon_23405:HG4_Ill_MetaSV_4597:HG2_Ill_MetaSV_4411:HG2_PB_SVrefine2Falcon1plusDovetail_10362:HG4_PB_HySA_10491;NumClusterSVs=9;ExactMatchIDs=HG2_PB_HySA_13156;NumExactMatchSVs=1;ClusterMaxShiftDist=0.169872;ClusterMaxSizeDiff=0.166929;ClusterMaxEditDist=0.205128;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=285;DistBack=7519;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=6:93576130-93576148;PctSeqSimilarity=0.9461;PctSizeSimilarity=0.9048;PctRecOverlap=0.9048;SizeDiff=-30;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=91;MatchId=4727.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:22:5:2:23:./.:0:0:0:0:0/1:26:5:./.:.:.:.:.:.
chr6	94374471	HG2_PB_PB10Xdip_26180	G	GGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGGGAGGGAGAGAGAGAGAGAGGGA	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_23408:HG2_PB_assemblyticsPBcR_22635:HG2_PB_PB10Xdip_26181:HG2_PB_PB10Xdip_26180:HG3_PB_pbsv_6899:HG2_PB_pbsv_7105;NumClusterSVs=6;ExactMatchIDs=HG2_PB_PB10Xdip_26180:HG2_PB_PB10Xdip_26181;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0826446;ClusterMaxEditDist=0.24;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=59;DistBack=5;DistForward=23033;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=19;REFWIDENED=6:94374470-94374491;PctSeqSimilarity=0.9756;PctSizeSimilarity=0.9516;PctRecOverlap=0.9365;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4728.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:./.:0:0:0:1:./.:0:0:0:0:0/1:5:6:./.:.:.:.:.:.
chr6	94764711	HG4_Ill_manta_1788	A	AGTGTGACAGACAGTGATTATGTACTGCAGGGAGAAAATGCAGTTAAAAAGAGACAATTCATTCCCATAGCTTAAAGGGACAATTTCCTTG	20	PASS	ClusterIDs=HG3_PB_HySA_10899:HG4_PB_pbsv_7108:HG2_PB_pbsv_7110:HG3_PB_pbsv_6903:HG3_PB_SVrefine2Falcon1Dovetail_4297:HG4_PB_SVrefine2PBcRDovetail_3513:HG4_PB_SVrefine2Falcon1Dovetail_4288:HG4_Ill_manta_1788:HG4_Ill_SVrefine2DISCOVARDovetail_5268:HG4_Ill_Krunchall_10611:HG4_Ill_GATKHC_11953:HG4_Ill_GATKHCSBGrefine_5030:HG4_Ill_250bpfermikitraw_10009:HG4_Ill_150bpfermikitraw_9601:HG3_Ill_manta_1694:HG3_Ill_Spiral_7823:HG2_PB_SVrefine2PBcRplusDovetail_9647:HG2_PB_SVrefine2PB10Xhap12_5195:HG2_PB_SVrefine2Falcon1plusDovetail_10365:HG2_Ill_manta_2058:HG2_10X_SVrefine210Xhap12_5080:HG2_PB_assemblyticsfalcon_23413:HG2_PB_assemblyticsPBcR_22639:HG3_PB_SVrefine2PBcRDovetail_3284:HG4_Ill_svaba_9306:HG3_Ill_svaba_9288:HG3_Ill_SVrefine2DISCOVARDovetail_5399:HG3_Ill_Krunchall_10024:HG3_Ill_GATKHCSBGrefine_4907:HG3_Ill_250bpfermikitraw_9681:HG2_PB_SVrefine2Falcon2Bionano_3578:HG2_Ill_svaba_9219:HG2_Ill_SVrefine2DISCOVARplusDovetail_11325:HG2_Ill_Krunchall_10283:HG2_Ill_GATKHCSBGrefine_4962:HG2_Ill_250bpfermikitraw_9998:HG2_PB_HySA_13163:HG4_PB_HySA_10498;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5080:HG2_Ill_manta_2058:HG2_PB_SVrefine2Falcon1plusDovetail_10365:HG2_PB_SVrefine2PB10Xhap12_5195:HG2_PB_SVrefine2PBcRplusDovetail_9647:HG3_Ill_Spiral_7823:HG3_Ill_manta_1694:HG4_Ill_150bpfermikitraw_9601:HG4_Ill_250bpfermikitraw_10009:HG4_Ill_GATKHCSBGrefine_5030:HG4_Ill_GATKHC_11953:HG4_Ill_Krunchall_10611:HG4_Ill_SVrefine2DISCOVARDovetail_5268:HG4_Ill_manta_1788:HG4_PB_SVrefine2Falcon1Dovetail_4288:HG4_PB_SVrefine2PBcRDovetail_3513;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0752688;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.172973;PBcalls=16;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=90;DistBack=23293;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:94764712-94764712;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:0:28:1:24:./.:0:0:0:0:1/1:0:28:./.:.:.:.:3135:.
chr6	94858642	HG3_Ill_GATKHCSBGrefine_4908	G	GGGAGGGAGGGAGGGAGGAAGAAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGGGGAGGAAGAAAGGAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_7113:HG3_Ill_svaba_9291:HG2_PB_HySA_13166:HG3_Ill_GATKHC_11872:HG3_Ill_GATKHCSBGrefine_4908:HG2_Ill_svaba_9222:HG3_PB_HySA_10901:HG3_PB_pbsv_6905;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_svaba_9222:HG3_Ill_GATKHCSBGrefine_4908:HG3_Ill_GATKHC_11872:HG3_Ill_svaba_9291;NumExactMatchSVs=4;ClusterMaxShiftDist=0.129496;ClusterMaxSizeDiff=0.129496;ClusterMaxEditDist=0.28777;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=17261;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=90;REFWIDENED=6:94858590-94858679;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4730.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:27:0|1:39:3:2:16:./.:0:0:0:0:0/1:17:5:./.:.:.:.:.:.
chr6	96509181	HG2_PB_pbsv_7121	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTTCGCTCTGTCGCCGCAGGCTGGAGTGCAGTGGCGCGATCTCGACCTTCACACTGCAAGCTCCGCCCTCCCGGGTTCACGCCAATTCTCCTGCCTCCAGCCGCGTGTAGCTGGGACTACAGGCGCCGCAGCGACCATGGCCCGGCTTAATTTTTGTATTTTTTAGTAGAGACGGGGGTTTCACCGATGTTAGCCAGATGGTCTCGATCTCATCTGAACCGTCCGTGATCCCGCCCGTGCTCGCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACACGCTGCGCCCGGCCCTCTCAAGATACTTCTTT	20	PASS	ClusterIDs=HG2_PB_HySA_13180:HG2_PB_pbsv_7121:HG2_Ill_breakscan11_3722:HG3_PB_pbsv_6913:HG3_PB_HySA_10917:HG2_PB_SVrefine2Falcon2Bionano_3585:HG2_PB_SVrefine2Falcon1plusDovetail_10372:HG2_PB_assemblyticsfalcon_23425;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_7121;NumExactMatchSVs=1;ClusterMaxShiftDist=0.100295;ClusterMaxSizeDiff=0.100295;ClusterMaxEditDist=0.211429;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=355;DistBack=25340;DistForward=17102;DistMin=17102;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:96509182-96509181;PctSeqSimilarity=0.9474;PctSizeSimilarity=0.9239;PctRecOverlap=0.9099;SizeDiff=27;StartDistance=19;EndDistance=19;GTMatch=0;TruScore=92;MatchId=4731.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:33:0|1:37:1:1:25:./.:0:0:0:0:0/1:37:7:0/1:7:6:.:.:.
chr6	96641094	HG3_Ill_SVrefine2DISCOVARDovetail_5411	T	TAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATGTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTCTAAAGAACTCAAAGAAATTTACAAGAAAAAAACAAACAACCCCATCAGAAAGTGGGTGAAGGATGTGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACAGATGAAAAAATGCTCATCATCACTGGCCATTAGAGAAATGAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCATGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGATATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCTAAATGTCCAACAACCACAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATAGTATGCAGCCATAAAAAAGGATGAGTTCATGTCTTTTATAGGGACATGGATGAAACTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAACACCACATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACACCGGGGACTATTGTGGGGTGAGGGGAGGGGGGAGGGATAGCATTAGGAGACATACCTAATGCTAAGTGACGAGTTAATGGGTGCCACACACCAACATGGCACATGTATACATATGTAACAAACCTGCACATTCTGCACATGTATCCTAAAACTTAAAGTATAATAATAATAAAATTTAAAAAAAAGAGAGAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_26206:HG3_PB_pbsv_6914:HG4_PB_HySA_10517:HG2_PB_pbsv_7122:HG4_PB_pbsv_7120:HG2_PB_SVrefine2Falcon2Bionano_3586:HG3_PB_SVrefine2PBcRDovetail_3290:HG3_Ill_SVrefine2DISCOVARDovetail_5411:HG2_Ill_SVrefine2DISCOVARplusDovetail_11332:HG2_PB_SVrefine2Falcon1plusDovetail_10373:HG4_PB_SVrefine2PBcRDovetail_3521:HG4_Ill_SVrefine2DISCOVARDovetail_5276:HG2_PB_SVrefine2PBcRplusDovetail_9653:HG2_PB_SVrefine2PB10Xhap12_5203:HG4_PB_SVrefine2Falcon1Dovetail_4297:HG3_PB_SVrefine2Falcon1Dovetail_4304:HG2_PB_PB10Xdip_26207;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11332:HG3_Ill_SVrefine2DISCOVARDovetail_5411:HG3_PB_SVrefine2PBcRDovetail_3290;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0455206;ClusterMaxSizeDiff=0.0455206;ClusterMaxEditDist=0.180769;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=1014;DistBack=84388;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=994;REFWIDENED=6:96641095-96642088;PctSeqSimilarity=0.999;PctSizeSimilarity=0.998;PctRecOverlap=0.998;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4732.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:1:19:0:16:./.:0:0:0:0:./.:0:7:./.:19:196:.:.:.
chr6	96945605	HG3_PB_assemblyticsfalcon_23289	C	CATTTGCTGAGGAGTGCTTTACTTCCGATTATGTGGTCAATTTTAGAATAAGTGTGATGTGGTGCTGAGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3723:HG4_PB_pbsv_7122:HG2_PB_pbsv_7124:HG2_PB_PB10Xdip_26208:HG4_Ill_svaba_9320:HG4_Ill_manta_1791:HG4_Ill_Krunchall_10628:HG4_Ill_GATKHC_11968:HG4_Ill_GATKHCSBGrefine_5035:HG4_Ill_250bpfermikitraw_10025:HG4_Ill_150bpfermikitraw_9618:HG3_PB_assemblyticsfalcon_23289:HG3_Ill_svaba_9303:HG3_Ill_Spiral_7836:HG3_Ill_Krunchall_10042:HG3_Ill_GATKHC_11889:HG3_Ill_GATKHCSBGrefine_4916:HG3_Ill_250bpfermikitraw_9698:HG3_Ill_150bpfermikitraw_9452:HG2_PB_assemblyticsfalcon_23429:HG2_PB_assemblyticsPBcR_22654:HG2_Ill_svaba_9230:HG2_Ill_manta_2062:HG2_Ill_Krunchall_10298:HG2_Ill_GATKHC_11931:HG2_Ill_GATKHCSBGrefine_4969:HG2_Ill_250bpfermikitraw_10013:HG2_Ill_150bpfermikitraw_9418:HG3_PB_pbsv_6916:HG2_PB_HySA_13184;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9418:HG2_Ill_250bpfermikitraw_10013:HG2_Ill_GATKHCSBGrefine_4969:HG2_Ill_GATKHC_11931:HG2_Ill_Krunchall_10298:HG2_Ill_manta_2062:HG2_Ill_svaba_9230:HG2_PB_assemblyticsPBcR_22654:HG2_PB_assemblyticsfalcon_23429:HG3_Ill_150bpfermikitraw_9452:HG3_Ill_250bpfermikitraw_9698:HG3_Ill_GATKHCSBGrefine_4916:HG3_Ill_GATKHC_11889:HG3_Ill_Krunchall_10042:HG3_Ill_Spiral_7836:HG3_Ill_svaba_9303:HG3_PB_assemblyticsfalcon_23289:HG4_Ill_150bpfermikitraw_9618:HG4_Ill_250bpfermikitraw_10025:HG4_Ill_GATKHCSBGrefine_5035:HG4_Ill_GATKHC_11968:HG4_Ill_Krunchall_10628:HG4_Ill_manta_1791:HG4_Ill_svaba_9320;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0704225;ClusterMaxSizeDiff=0.0699301;ClusterMaxEditDist=0.176871;PBcalls=8;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=5078;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=6:96945604-96945607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:73:1/1:1:13:1:21:./.:0:0:0:0:1/1:0:53:./.:.:.:.:.:.
chr6	97087579	HG2_10X_SVrefine210Xhap12_5091	C	CACCACCAGGCCTGCCCTGAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_26214:HG2_Ill_SpiralSDKrefine_14939:HG3_PB_pbsv_6918:HG4_PB_pbsv_7123:HG2_PB_pbsv_7125:HG3_PB_assemblyticsfalcon_23291:HG2_PB_assemblyticsfalcon_23430:HG2_PB_assemblyticsPBcR_22655:HG4_PB_SVrefine2PBcRDovetail_3523:HG4_Ill_SVrefine2DISCOVARDovetail_5278:HG4_Ill_GATKHCSBGrefine_5036:HG4_Ill_250bpfermikitraw_10026:HG3_PB_SVrefine2PBcRDovetail_3292:HG3_PB_SVrefine2Falcon1Dovetail_4307:HG3_Ill_SVrefine2DISCOVARDovetail_5414:HG3_Ill_GATKHCSBGrefine_4917:HG2_PB_SVrefine2PBcRplusDovetail_9655:HG2_PB_SVrefine2PB10Xhap12_5205:HG2_PB_SVrefine2Falcon2Bionano_3588:HG2_PB_SVrefine2Falcon1plusDovetail_10375:HG2_Ill_SVrefine2DISCOVARplusDovetail_11335:HG2_Ill_GATKHCSBGrefine_4970:HG2_Ill_250bpfermikitraw_10014:HG2_10X_SVrefine210Xhap12_5091:HG4_PB_SVrefine2Falcon1Dovetail_4299:HG2_PB_PB10Xdip_26215;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5091:HG2_Ill_250bpfermikitraw_10014:HG2_Ill_GATKHCSBGrefine_4970:HG2_Ill_SVrefine2DISCOVARplusDovetail_11335:HG2_PB_SVrefine2Falcon1plusDovetail_10375:HG2_PB_SVrefine2Falcon2Bionano_3588:HG2_PB_SVrefine2PB10Xhap12_5205:HG2_PB_SVrefine2PBcRplusDovetail_9655:HG3_Ill_GATKHCSBGrefine_4917:HG3_Ill_SVrefine2DISCOVARDovetail_5414:HG3_PB_SVrefine2Falcon1Dovetail_4307:HG3_PB_SVrefine2PBcRDovetail_3292:HG4_Ill_250bpfermikitraw_10026:HG4_Ill_GATKHCSBGrefine_5036:HG4_Ill_SVrefine2DISCOVARDovetail_5278:HG4_PB_SVrefine2PBcRDovetail_3523;NumExactMatchSVs=16;ClusterMaxShiftDist=0.111675;ClusterMaxSizeDiff=0.111675;ClusterMaxEditDist=0.206186;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=98;DistBack=-345365;DistForward=2;DistMin=-345365;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=6:97087580-97087583;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4734.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:54:1/1:1:7:1:6:./.:0:0:0:0:1/1:0:15:./.:.:.:.:.:.
chr6	97686736	HG3_Ill_SVrefine2DISCOVARDovetail_5419	G	GTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCGTGCCCGGCTAATTTTTTGTATATGTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGACGGTCTCGATCTCCTGACCTCGTGATCCGCCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCGGCTAGCTTAGTTATTACATAGAAAAGGCAATTTAACGGCCGGGGGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGACCGAGACCGTCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCACGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAAGCCGGGAGGTGGAGCT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4417:HG2_PB_pbsv_7128:HG3_PB_pbsv_6921:HG2_PB_assemblyticsfalcon_23434:HG4_PB_assemblyticsfalcon_22820:HG2_PB_assemblyticsPBcR_22659:HG3_PB_assemblyticsfalcon_23295:HG2_PB_SVrefine2Falcon1plusDovetail_10378:HG3_PB_SVrefine2PBcRDovetail_3296:HG3_Ill_SVrefine2DISCOVARDovetail_5419:HG2_PB_SVrefine2PBcRplusDovetail_9658:HG2_Ill_SVrefine2DISCOVARplusDovetail_11337:HG2_PB_SVrefine2PB10Xhap12_5208:HG4_PB_SVrefine2PBcRDovetail_3526:HG4_PB_SVrefine2Falcon1Dovetail_4302:HG4_Ill_SVrefine2DISCOVARDovetail_5282:HG2_PB_SVrefine2Falcon2Bionano_3592:HG3_PB_SVrefine2Falcon1Dovetail_4311:HG4_PB_HySA_10521:HG3_PB_HySA_10925:HG2_PB_PB10Xdip_26219:HG2_PB_PB10Xdip_26218:HG4_Ill_manta_1792:HG3_Ill_MetaSV_4598:HG4_Ill_MetaSV_4605;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11337:HG2_PB_SVrefine2PBcRplusDovetail_9658:HG3_Ill_SVrefine2DISCOVARDovetail_5419:HG3_PB_SVrefine2PBcRDovetail_3296;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0868707;ClusterMaxSizeDiff=0.0675273;ClusterMaxEditDist=0.266535;PBcalls=18;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=500;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=6:97686737-97686743;PctSeqSimilarity=0.999;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4736.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:80:1/1:0:25:0:22:./.:0:0:0:0:1/1:0:12:1/1:4:94:.:.:.
chr6	98251328	HG2_PB_SVrefine2PB10Xhap12_5210	C	CTAGACCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAG	20	PASS	ClusterIDs=HG3_PB_pbsv_6922:HG4_PB_pbsv_7127:HG2_PB_PB10Xdip_26220:HG2_PB_pbsv_7129:HG2_PB_assemblyticsPBcR_22663:HG3_PB_assemblyticsfalcon_23298:HG2_PB_assemblyticsfalcon_23437:HG3_PB_HySA_10928:HG2_Ill_breakscan11_3724:HG4_PB_HySA_10523:HG2_PB_SVrefine2PBcRplusDovetail_9660:HG2_PB_SVrefine2PB10Xhap12_5210:HG2_PB_SVrefine2Falcon2Bionano_3594:HG3_PB_SVrefine2Falcon1Dovetail_4312:HG2_PB_SVrefine2Falcon1plusDovetail_10379:HG2_10X_SVrefine210Xhap12_5098;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3594:HG2_PB_SVrefine2PB10Xhap12_5210:HG2_PB_SVrefine2PBcRplusDovetail_9660;NumExactMatchSVs=3;ClusterMaxShiftDist=0.144231;ClusterMaxSizeDiff=0.144231;ClusterMaxEditDist=0.196078;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=308;DistBack=33491;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=6:98251329-98251340;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9935;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4737.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:96:1/1:1:25:0:20:./.:0:0:0:0:1/1:0:25:1/1:1:65:.:.:.
chr6	101720767	HG3_PB_SVrefine2Falcon1Dovetail_4318	A	AGACGCTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTACTGCCTCAGCCTCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCCCCGCCTCGGCCTCCCAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_13222:HG4_PB_pbsv_7142:HG2_PB_pbsv_7139:HG4_PB_SVrefine2PBcRDovetail_3531:HG2_PB_assemblyticsfalcon_23462:HG2_Ill_breakscan11_3725:HG3_PB_SVrefine2Falcon1Dovetail_4318:HG4_PB_SVrefine2Falcon1Dovetail_4309:HG2_PB_SVrefine2Falcon1plusDovetail_10384:HG4_PB_HySA_10556;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_4318;NumExactMatchSVs=1;ClusterMaxShiftDist=0.128834;ClusterMaxSizeDiff=0.128834;ClusterMaxEditDist=0.211656;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=792;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=6:101720768-101720780;PctSeqSimilarity=0.9891;PctSizeSimilarity=0.9846;PctRecOverlap=0.9815;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:27:0|1:38:0:0:20:./.:0:0:0:0:0/1:31:12:0/1:6:23:.:.:.
chr6	102204250	HG2_PB_SVrefine2Falcon1plusDovetail_10385	C	CTACATTTATAATCTACATTTATAAATGGTTACATTTATAATCTACATTTATAAATGGT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9458:HG4_PB_HySA_10559:HG3_PB_HySA_10960:HG3_PB_pbsv_6930:HG2_PB_HySA_13227:HG4_Ill_svaba_9354:HG2_PB_pbsv_7140:HG4_Ill_Krunchall_10670:HG4_Ill_GATKHC_12011:HG4_Ill_GATKHCSBGrefine_5053:HG4_Ill_250bpfermikitraw_10060:HG3_PB_SVrefine2Falcon1Dovetail_4319:HG3_Ill_svaba_9337:HG3_Ill_SVrefine2DISCOVARDovetail_5435:HG3_Ill_Krunchall_10085:HG3_Ill_GATKHC_11936:HG3_Ill_250bpfermikitraw_9740:HG3_Ill_150bpfermikitraw_9501:HG2_PB_SVrefine2Falcon1plusDovetail_10385:HG2_Ill_svaba_9261:HG2_Ill_SVrefine2DISCOVARplusDovetail_11350:HG2_Ill_Krunchall_10334:HG2_Ill_GATKHC_11968:HG2_Ill_250bpfermikitraw_10047;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9458:HG4_Ill_svaba_9354:HG4_Ill_Krunchall_10670:HG4_Ill_GATKHC_12011:HG4_Ill_GATKHCSBGrefine_5053:HG4_Ill_250bpfermikitraw_10060:HG3_PB_SVrefine2Falcon1Dovetail_4319:HG3_Ill_svaba_9337:HG3_Ill_SVrefine2DISCOVARDovetail_5435:HG3_Ill_Krunchall_10085:HG3_Ill_GATKHC_11936:HG3_Ill_250bpfermikitraw_9740:HG3_Ill_150bpfermikitraw_9501:HG2_PB_SVrefine2Falcon1plusDovetail_10385:HG2_Ill_svaba_9261:HG2_Ill_SVrefine2DISCOVARplusDovetail_11350:HG2_Ill_Krunchall_10334:HG2_Ill_GATKHC_11968:HG2_Ill_250bpfermikitraw_10047;NumExactMatchSVs=19;ClusterMaxShiftDist=0.137931;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.260163;PBcalls=7;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=-58;DistForward=41;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=72;REFWIDENED=6:102204251-102204322;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4740.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:41:0|1:32:5:2:34:./.:0:0:0:0:0/1:25:24:./.:.:.:.:.:.
chr6	102283758	HG2_PB_SVrefine2PB10Xhap12_5214	T	TGGGAATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGTTGTGTTGGAACAATTTGTAAAGTTTGGAACAAGAAAATAGTCTCAATTAGCTCCAAAGTATCTCCTATTATTTAATTAATTTTTTTTTTATAAATTAATTTTTTTATTATTATTATTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCGACCCCACCACAGTCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGCGTTTGGTTTTTTGTTCTTGTGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAATATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGTGAGCATTTCTTCATGTGCTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTA	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3301:HG2_PB_pbsv_7142:HG2_PB_PB10Xdip_24510:HG4_PB_pbsv_7145:HG3_PB_pbsv_6933:HG2_PB_assemblyticsfalcon_23468:HG2_PB_HySA_13229:HG3_PB_HySA_10963:HG2_PB_SVrefine2PB10Xhap12_5214:HG2_PB_SVrefine2Falcon2Bionano_3598:HG4_PB_SVrefine2Falcon1Dovetail_4312:HG2_PB_SVrefine2PBcRplusDovetail_9664:HG4_PB_SVrefine2PBcRDovetail_3532:HG3_PB_SVrefine2Falcon1Dovetail_4322:HG2_PB_SVrefine2Falcon1plusDovetail_10386:HG2_PB_HySA_13228:HG4_PB_HySA_10560;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5214;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0730558;ClusterMaxSizeDiff=0.0722702;ClusterMaxEditDist=0.142694;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1273;DistBack=63153;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=6:102283759-102283771;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9969;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:54:1|0:1:38:23:0:./.:0:0:0:0:0/1:15:7:0/1:47:173:.:1276:.
chr6	102462024	HG2_Ill_GATKHCSBGrefine_4988	T	TTTAGTTTTTGGAGGTTGTATGTGTCCAGTAATTTATTCTAAATTTTGGGGTTCATTATTGTTCTTTTCAGGGAATTAATTTATTCCTGGC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5109:HG2_PB_pbsv_7143:HG3_PB_HySA_10969:HG3_PB_pbsv_6934:HG2_PB_HySA_13234:HG3_Ill_svaba_9346:HG3_Ill_Krunchall_10094:HG3_Ill_GATKHC_11943:HG3_Ill_GATKHCSBGrefine_4935:HG3_Ill_250bpfermikitraw_9749:HG3_Ill_150bpfermikitraw_9510:HG2_Ill_svaba_9269:HG2_Ill_Krunchall_10344:HG2_Ill_GATKHC_11980:HG2_Ill_GATKHCSBGrefine_4988:HG2_Ill_250bpfermikitraw_10056:HG2_Ill_150bpfermikitraw_9465:HG2_PB_SVrefine2Falcon2Bionano_3599;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9465:HG2_Ill_250bpfermikitraw_10056:HG2_Ill_GATKHCSBGrefine_4988:HG2_Ill_GATKHC_11980:HG2_Ill_Krunchall_10344:HG2_Ill_svaba_9269:HG3_Ill_150bpfermikitraw_9510:HG3_Ill_250bpfermikitraw_9749:HG3_Ill_GATKHCSBGrefine_4935:HG3_Ill_GATKHC_11943:HG3_Ill_Krunchall_10094:HG3_Ill_svaba_9346;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0324324;ClusterMaxEditDist=0.224599;PBcalls=5;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=90;DistBack=2596;DistForward=11961;DistMin=2596;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=98;REFWIDENED=6:102461973-102462070;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4743.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:40:0|1:33:3:4:37:./.:0:0:0:0:0/1:24:21:./.:.:.:.:.:.
chr6	102820935	HG4_PB_pbsv_7150	C	CTATTTTCATTATAATTATATATTTATAACATAACTATTATATATTTATACATAACTATATATATTTATTACATAAATATATATTTATACATAACTATATTATATTTATACATAAATATATATTATACATAACTACTATATATTATTACATCAAATATAATTTATACATAAATATATATATTTATACATAAATAATATTATACATTAAATTATATATTTATACATAAATATATAAACTTATACATAAATATATATATTATACAAATATATATATACATACAATATATATTCTATACAAAATATATTATATTTATACAAATATATATTATACATAAATATTATAGTATAGCCATTAAATATGATATATTTATTACAAATATATATTTATAACCATTAAATATATATTTATACATAAATATATATATTATACAAATATATATTTATAACATAAATATATATTTATACATAAAATATATATTTATACAAATATATATTATACTAAATATAATTTTATACATAAATATAGTATATTATACAAATATTATATTTATACATAAATATATATATTTATACAAATATATATTTATACATAAATATATATTTATACATAAATATATATATTTTATAACAATATATATTTATACATAAATATATATTTATACATAAATATATATATTTATTACAAAATATATATTTAATATAAATACTATATTATTATACATATATATA	10	PASS	ClusterIDs=HG4_PB_pbsv_7150:HG2_PB_HySA_13243:HG2_PB_pbsv_7147:HG4_PB_SVrefine2Falcon1Dovetail_4315:HG2_PB_SVrefine2PBcRplusDovetail_9666:HG2_PB_SVrefine2Falcon1plusDovetail_10387;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_7150;NumExactMatchSVs=1;ClusterMaxShiftDist=0.111513;ClusterMaxSizeDiff=0.111513;ClusterMaxEditDist=0.170891;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=728;DistBack=5120;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:102820936-102820935;PctSeqSimilarity=0.9511;PctSizeSimilarity=0.9753;PctRecOverlap=0.8957;SizeDiff=18;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=94;MatchId=4744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:22:0|1:40:1:3:19:./.:0:0:0:0:./.:29:3:0/1:16:27:.:.:.
chr6	102911745	HG3_PB_SVrefine2Falcon1Dovetail_4324	C	CCTTGGTAAAGGTTAGTACGCTACCCTTGGTAAAGGTTAGTACGCTACCTTGGTAAAGGTTAGTACGCTAACCCTTGGTAAAGGTTAGTACGCTACCTTGGTAAAGGTTAGTACGCTACCTTGGTAAAGGTTAGTACGCTACCCTTGGTAAAGGTTAGTACGCTACCTTGGTAAAGGTTAGTACGCTA	10	PASS	ClusterIDs=HG2_PB_pbsv_7148:HG4_PB_SVrefine2Falcon1Dovetail_4316:HG3_PB_SVrefine2Falcon1Dovetail_4324:HG3_PB_pbsv_6936;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_4324;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0365535;ClusterMaxSizeDiff=0.0365535;ClusterMaxEditDist=0.202073;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=187;DistBack=18;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=668;REFWIDENED=6:102911653-102912320;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.974;PctRecOverlap=0.6114;SizeDiff=-5;StartDistance=-72;EndDistance=-72;GTMatch=0;TruScore=85;MatchId=4745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:41:./.:8:15:13:5:./.:0:0:0:0:0/0:17:0:./.:.:.:.:.:.
chr6	102958467	HG2_PB_SVrefine2PB10Xhap12_5218	T	TAAAAAGTAGACTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3727:HG4_PB_pbsv_7152:HG4_Ill_MetaSV_4610:HG2_PB_assemblyticsfalcon_23479:HG2_PB_pbsv_7149:HG2_PB_HySA_13244:HG3_PB_pbsv_6937:HG3_PB_SVrefine2Falcon1Dovetail_4325:HG4_PB_SVrefine2Falcon1Dovetail_4317:HG2_PB_SVrefine2Falcon1plusDovetail_10389:HG2_10X_SVrefine210Xhap12_5113:HG2_PB_SVrefine2PBcRplusDovetail_9667:HG2_PB_SVrefine2PB10Xhap12_5218:HG2_PB_SVrefine2Falcon2Bionano_3600:HG2_Ill_GATKHCSBGrefine_4989:HG4_Ill_GATKHCSBGrefine_5059:HG4_PB_HySA_10572:HG2_PB_PB10Xdip_24516;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3600:HG2_PB_SVrefine2PB10Xhap12_5218:HG2_PB_SVrefine2PBcRplusDovetail_9667;NumExactMatchSVs=3;ClusterMaxShiftDist=0.157165;ClusterMaxSizeDiff=0.157165;ClusterMaxEditDist=0.235821;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=319;DistBack=28582;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:102958468-102958482;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4746.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:80:./.:0:0:0:0:./.:0:0:0:0:1/1:0:20:1/1:3:55:.:.:.
chr6	104715227	HG2_10X_SVrefine210Xhap12_5120	C	CATGCTTTGTATAATTTGATTGCCATTGAACACACCACAGAAATCCACACATCACTTACGTACCTGTTCATTGAACAACAGTTATAGTTTATTCTATGCTACTTGTTCTGAAGGGATATGAAAGAGGGGGAAAATTGTATACTTATACTCAAATATCTAAGTTAAGAGAGCACTAACACCACAGAAAATGTATGAAGTAATTATGAGTCAACTAATAAACTCAAATGGGACTCATAGGTGAAATTTATTTAAAGAGGCCAAACAAAAATGATTTTTTAAAATCTCAAGATTAATTCCATAAGTAGTGATATAATTATGTTTAAGAATGATCTCAATCAATATCTTTGGCAGAGAATGAGACAATATTAGTTATCTAAATTATTTCCTAAGTTTATGTTCTAGAGACAGTGTCCAGAGAGCCACAGATAAAAACCTGGGCAAAGTTAAAGCTAACGGCCTTCAACATTCCTTTTCCCTCAAAGAGTTTTCACATAACACAAGATTTTTAAGTGTAGAAGAAATGTGATCTTGGTAAGTGATTCTAAAAAATAAATATTAAATAAAAAAATAGTTTTAGTGTTACCAAAAGACGTAATATTCTCATTTCAAAAAA	20	PASS	ClusterIDs=HG3_Ill_Spiral_7890:HG4_PB_SVrefine2Falcon1Dovetail_4324:HG4_PB_SVrefine2PBcRDovetail_3539:HG3_PB_SVrefine2Falcon1Dovetail_4334:HG3_Ill_MetaSV_4605:HG3_Ill_GATKHCSBGrefine_4946:HG4_Ill_SVrefine2DISCOVARDovetail_5309:HG4_Ill_MetaSV_4612:HG4_Ill_GATKHCSBGrefine_5068:HG2_Ill_MetaSV_4423:HG2_Ill_GATKHCSBGrefine_4997:HG2_10X_SVrefine210Xhap12_5120:HG3_PB_pbsv_6948:HG4_PB_HySA_10585:HG2_PB_pbsv_7160:HG4_PB_pbsv_7160:HG2_Ill_breakscan11_3729:HG4_Ill_Spiral_604:HG2_Ill_Spiral_522;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5120:HG2_Ill_GATKHCSBGrefine_4997:HG2_Ill_MetaSV_4423:HG4_Ill_GATKHCSBGrefine_5068:HG4_Ill_MetaSV_4612:HG4_Ill_SVrefine2DISCOVARDovetail_5309;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0602219;ClusterMaxSizeDiff=0.0602219;ClusterMaxEditDist=0.191002;PBcalls=7;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=612;DistBack=3;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:104715228-104715228;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4747.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:44:0|1:28:4:0:33:./.:0:0:0:0:0/1:32:11:0/1:10:41:.:.:.
chr6	104772657	HG2_Ill_MetaSV_4424	T	TGAAAGATCATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_13260:HG2_PB_pbsv_7161:HG4_PB_pbsv_7161:HG3_PB_pbsv_6949:HG2_PB_HySA_13262:HG3_PB_HySA_10988:HG2_PB_HySA_13261:HG3_PB_SVrefine2Falcon1Dovetail_4335:HG3_Ill_GATKHCSBGrefine_4947:HG3_PB_SVrefine2PBcRDovetail_3308:HG2_PB_SVrefine2PBcRplusDovetail_9675:HG2_PB_SVrefine2PB10Xhap12_5226:HG2_PB_SVrefine2Falcon2Bionano_3608:HG4_Ill_MetaSV_4613:HG2_PB_SVrefine2Falcon1plusDovetail_10396:HG2_Ill_MetaSV_4424:HG2_Ill_GATKHCSBGrefine_4998:HG2_10X_SVrefine210Xhap12_5121:HG3_Ill_MetaSV_4606:HG4_PB_SVrefine2Falcon1Dovetail_4325:HG2_Ill_breakscan11_3730:HG2_PB_PB10Xdip_24524:HG3_PB_HySA_10987;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5121:HG2_Ill_GATKHCSBGrefine_4998:HG2_Ill_MetaSV_4424:HG2_PB_SVrefine2Falcon1plusDovetail_10396:HG4_Ill_MetaSV_4613;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0860215;ClusterMaxSizeDiff=0.0829493;ClusterMaxEditDist=0.169139;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=317;DistBack=57425;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=6:104772658-104772669;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4748.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:87:./.:1:10:0:3:./.:0:0:0:0:1/1:0:19:1/1:1:91:.:.:.
chr6	105116256	HG2_Ill_GATKHC_12002	T	TTATATATAATATATAATATATAATATATATAATATATAATATATATTATATATAATATATATTATATATTATATATAATATATATTATATATTATATATAATATATAATATATATTATATATAATATATAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4327:HG4_Ill_GATKHC_12044:HG3_Ill_GATKHC_11964:HG2_Ill_GATKHC_12002:HG4_PB_pbsv_7163:HG2_PB_pbsv_7163:HG3_Ill_manta_1707;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_12002:HG3_Ill_GATKHC_11964:HG4_Ill_GATKHC_12044;NumExactMatchSVs=3;ClusterMaxShiftDist=0.373134;ClusterMaxSizeDiff=0.373134;ClusterMaxEditDist=0.373134;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=131;DistBack=-91;DistForward=4;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=152;REFWIDENED=6:105116201-105116352;PctSeqSimilarity=0.9279;PctSizeSimilarity=0.8506;PctRecOverlap=0.7742;SizeDiff=-23;StartDistance=23;EndDistance=23;GTMatch=0;TruScore=85;MatchId=4749.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:33:0|1:20:3:1:22:./.:0:0:0:0:0/1:20:11:./.:.:.:.:.:.
chr6	106699509	HG3_PB_SVrefine2PBcRDovetail_3317	A	AGAGAGAGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGCGGAGAGAGGGAGAAGGGAGAGAGGGAGGGAGGGGGAGGGGGAGAGGGAGGGGGAGAGGGAGGGAGGGAGAGAGGGAGAGGGAGAGGGAGGGGGAGAGAGGGAGGGAGGGTAAGAGAGGGAGAGAGGGAGGGGGAGAGAGGGAGGGAGGGAGAGAGAGGGAGAGAGGGAGGGGGGAGAAAGGAGGGGGAGGGGGAGAGAGGGAGGGTGGGGGAGGGAGGGAGGGGGAGGGAGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3546:HG3_PB_HySA_11006:HG3_PB_HySA_11005:HG2_PB_HySA_13284:HG2_PB_pbsv_7174:HG2_PB_HySA_13283:HG3_PB_pbsv_6958:HG2_PB_PB10Xdip_24530:HG3_PB_SVrefine2Falcon1Dovetail_4344:HG2_PB_SVrefine2Falcon1plusDovetail_10404:HG2_PB_SVrefine2Falcon2Bionano_3616:HG2_PB_SVrefine2PB10Xhap12_5235:HG2_PB_SVrefine2PBcRplusDovetail_9684:HG4_PB_pbsv_7171:HG3_PB_SVrefine2PBcRDovetail_3317:HG4_PB_SVrefine2Falcon1Dovetail_4334;NumClusterSVs=16;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_3317;NumExactMatchSVs=1;ClusterMaxShiftDist=0.108303;ClusterMaxSizeDiff=0.108303;ClusterMaxEditDist=0.22695;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=271;DistBack=54792;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=48;REFWIDENED=6:106699510-106699557;PctSeqSimilarity=0.993;PctSizeSimilarity=1;PctRecOverlap=0.9483;SizeDiff=0;StartDistance=-14;EndDistance=-14;GTMatch=1;TruScore=98;MatchId=4751.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:1:27:1:14:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr6	106813555	HG4_PB_HySA_10601	A	ATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACACGCGCCCGGCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4335:HG2_PB_pbsv_7175:HG4_PB_assemblyticsfalcon_22900:HG4_PB_HySA_10601:HG4_PB_pbsv_7172:HG2_PB_SVrefine2Falcon1plusDovetail_10405;NumClusterSVs=6;ExactMatchIDs=HG4_PB_HySA_10601;NumExactMatchSVs=1;ClusterMaxShiftDist=0.100763;ClusterMaxSizeDiff=0.100763;ClusterMaxEditDist=0.177253;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=333;DistBack=3693;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=6:106813556-106813564;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=4752.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:34:1|0:0:26:36:1:./.:0:0:0:0:0/1:29:12:0/1:7:29:.:.:.
chr6	107037109	HG2_PB_HySA_13292	G	GGAGGAGGAGGAGGAGGGGAGGGAGGAGGAGGGAGGGGAGGGAGGAGGGAGGGAGGGAGGAGGGAGGAGGAGGAGGGAGGGAGGAGGAGGGAGGGAGGAGGAGGGAGGGGAGGAGGAGGGGGAGGAGGGAGGGAGGAGGGAGGGAGGAAGAAGGAGAAGAAGGAGAAGAAGGAGAAGAGGAAGAGGAAGAAGAGGAAGAGGAAGGAGGAGAAGAGGAGGAGGAGAAGGAGGAGGAGGAGAGGAGGAGGAGGGAAGAGGGGAGAGAAGGAGGAGGAGAGAAGGAGGAGGAGAAGAAGGAGGAGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3549:HG2_PB_HySA_13292:HG4_PB_pbsv_7177:HG2_PB_SVrefine2Falcon1plusDovetail_10408:HG2_PB_SVrefine2Falcon2Bionano_3618:HG2_PB_pbsv_7179:HG3_PB_SVrefine2Falcon1Dovetail_4347:HG4_PB_SVrefine2Falcon1Dovetail_4338:HG3_PB_SVrefine2PBcRDovetail_3319;NumClusterSVs=9;ExactMatchIDs=HG2_PB_HySA_13292;NumExactMatchSVs=1;ClusterMaxShiftDist=0.229985;ClusterMaxSizeDiff=0.229985;ClusterMaxEditDist=0.320233;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=303;DistBack=10;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=158;REFWIDENED=6:107036980-107037137;PctSeqSimilarity=0.9095;PctSizeSimilarity=0.8347;PctRecOverlap=0.8347;SizeDiff=-60;StartDistance=-3;EndDistance=-3;GTMatch=1;TruScore=85;MatchId=4753.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:43:1/1:2:22:3:17:./.:0:0:0:0:./.:1:3:0/1:2:8:.:.:.
chr6	107321913	HG4_PB_pbsv_7179	T	TGCACTTCCAGCCTCGGCGAACAGAAGGAGACTCCATCCTCAAACAAAGAAACCTCGCCTAAATCTTAATCAGTGAACCAGTCCAGTGAAATATAAGATTGATAAAATATTTTGACCTTGGGCTAGTGTGGTGGCTCACACCTTAATATCCCATAACTTTGAGGCCAAAGGCAGAGGATTGCTGGGTCTAGAAGTTGGAGACCAGTCCTGCGGCAACATGGCAAGACTGCTCTTAAAATAACAAACTAATAAATAAATAAACAATATTATTTCTGAAATCAAGGTGAAGAAATGATAGTGCTAATTTGAAATTCCTAATACTGATAACAAGGTAAGGGAGGATTAGGTAGTTTCAAAATGTCTTGGCTCATAATAAAAATGTCATAAATGGCAGTGTCGTGGTGGTTACGCTGTAATCCCAGCACTTTGGGGGCCAAGGTCGGCGGATCATTTGAGGTCAGGGGTTCAAATGACCAGCTGGCCAACATGGCAATACCGATCTGTACTAAAATATACTAAAAAAAAAATGAGCTGGGCGTTGGCCTGGCACATGCTGTATCCTAGCTACTCGGGAGACTAAGGCATGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGGTGAGCCAAGATCCAGCCATGCACTCCAGCTGGGCGATAGGGCAAGACTCTGTCTTTCAAAAAAATAATAATAAAAATAATAAAAGGCGCAAGGGTGCTTGTACCGACCTGGGTTTAGAGGCCCAATTTTGGAAAGGGTTTAGAATCCCTTCTAAGATTTATGGGAGTTTAGAAGCCCCTCTCAGTAAAGTTCCTCTCGTAAAGTCTTTCAGCTAAGTAACAGGTTTGGCCCTATGCGGCATGGTTTAACGGCTCTTTCTCTTTGGATTAAATCCTGTCTTGCCCCAACTCTTGTTGATGTGGCTGTGGGTGACAAGGAATTTCAGGCATGTTCAGGATCATGGGAATGGGAAAGCCTTTACTTCCTAAAAGGAGAAACTGAAAGCTGATGAGACGCTGGAAAAGAATCCCTTCACAACCCAACATGGCCGCTGAAACTTCTCAGTGTCCTTGCAATGGGTAGGTCTTTCGTGGCCTCACTGAGGTGTCTCGCTTCCTCCCCATCGACCCATCAGGCAATGCTTTCTCTTTCTCTCTCTGTGCAAACTGGTTGAATAATGGTACATAAAAACTGTTATCTCTGTAAAGTTGTTCTGGGGTTTTCTTTTGGGTTTTTTTAGACAGTTCAACTCTGTTGCCCAGGCTGGAATGCAAATGGGGCAATCTTGGCTCACTGAACCTCCGCTCCGGTCCAAGCCGATCTCCTGCCTCAGCTCCGGAGTATCTGGGATTACAGGTGCCACCACCATTGCCTGTAATTTTGTATTTAGTAAGATGGGTTTGCCATGTTGGCCAGGCCTGGTTTCAAAACACTCTGATCCTCAGGTTGCTCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTTAGCCACTGCCCAGCCTGTAGAGTTTTGTTTGTAGGCCAGACACGGTGGCTCATGCCTGTAATCCCCCCAGCACTTTGGGGAAGCCGAGGCCGGGCCAATCATCTGAGGTCAGGGTTGAGACCAAGCTGGCCCACTGGCAAAACTCTGTCTCTAACTAAAAATACAAATTAGTCGGGGCCCGTGGCACGTACTGTAATCCAGCTACTTGGGAAGAACTGAGGCAGGAGAATCTCTTGAACGCCAGGGAGGCAGATGGTTGCAGTGAGCAGAGATCGCGGGCTGCATCCGCAGCCTGGGCGACAGAACGGAGACTATGTCAAAAAAAACAAAAAAAAAAAAGGTTTTGCCTTGTTTTTTTTATTTTTGAGACAGAGTCTCGCCTCTGTCACCGCAGGCCTGGAGTGCAAATGGTGCAATTGGCTTACTGGCAAACCTCCGCTTCTGGGTTAAGCAATTCTCCTGTCCAGCCTCCAGAGTAGCTATGATTACAGGCATGTGCCTTCCACTCAGGCTAATTTTTTGTACTTTTGTAAGAAACAGGCTTTCACAGTTGGCCAGGCTGGTCTCAAAGCCCTGAACTCAGGTGATCTGCCCATCCTGGCTCCCAATAGTGCTGGGATTACAGGCGTGAGCCAACCGCATACCGGCCTTAATCTCCTGCAAGTTTTAATTAATCAAAAAAAGATTTGTGAAGCTAGTTTAAGCTGTAGTGAAATCTTAGTGTGCTTTGTGTGTTCTTTCTGTATCGTTTGTCATATACGGGGTACCTTAGGATAGAACATAGGCTTTTAGGATACTGCAAGTCTGGCTTTTCAAGATGGCCCAGCATAATCTTGTCAGTTACAAAAAGGTTGCTGCAGGTCCCCCCCAAAAAATGAAATGAGGTTTCCTTTCTTGTCTTGTATGTCTGGGAAGCTTGACTCTAACATGTGGCCTATGTTTTTTCTTTTCTTTTCAACACAATGGCGGGCTGGGTTCAGGGTCGATTCGCCAGCTTAGGGAATAGTCTTTATCCTTCTATGTATTTATATATGTATATTGGTGGTGATGTTTATATATGAGAGAACTTAACTTAATTGATTTTAAAATAATAATGAAGCTTAAATCAAAATATTTGTCAGAAAAGTAAAAGTGGTAATGTCTTTAGTTCAATGTGACTTAAATAATTTGGGAATAAGGAGAGTTTTAAAGATTATGATAAAATCAAAAATATCAGCTCGGGCACAGTGGTCACACCTACAATTTCAGTCAACTTGGGAGGGCCGAGTGCGGGTGAATCAGCTGAGGTCAGGAAGTTAAGACCAGTCGACCACATGGGGATAGCCGTCTCTACGAAAATCAAATTAGCATGGGCAATGGTGGCAGGCGCCCGTACAGCTCACCTCTCATGAGGCTGAGGGCAGGAGAATTGCTTGAATCCTGGAAGGCAGAGGTTCAGTGAGCCGAGATCCCGCGCCAACTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10409:HG3_PB_pbsv_6963:HG4_PB_pbsv_7179:HG3_PB_HySA_11020:HG4_PB_assemblyticsfalcon_22913:HG4_PB_SVrefine2Falcon1Dovetail_4340:HG2_PB_SVrefine2Falcon2Bionano_3619:HG4_PB_SVrefine2PBcRDovetail_3551:HG2_PB_SVrefine2PBcRplusDovetail_9688:HG2_10X_SVrefine210Xhap12_5138:HG3_Ill_SVrefine2DISCOVARDovetail_5455:HG3_PB_SVrefine2PBcRDovetail_3320:HG3_PB_SVrefine2Falcon1Dovetail_4349:HG2_PB_assemblyticsPBcR_22752;NumClusterSVs=14;ExactMatchIDs=HG4_PB_pbsv_7179;NumExactMatchSVs=1;ClusterMaxShiftDist=0.23344;ClusterMaxSizeDiff=0.23344;ClusterMaxEditDist=0.30329;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=2955;DistBack=43;DistForward=10038;DistMin=43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:107321914-107321913;PctSeqSimilarity=0.9427;PctSizeSimilarity=0.9909;PctRecOverlap=0.9848;SizeDiff=27;StartDistance=32;EndDistance=32;GTMatch=0;TruScore=97;MatchId=4754.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:./.:25:13:1:7:./.:0:0:0:0:0/1:15:2:0/1:114:99:.:.:.
chr6	109972446	HG2_PB_SVrefine2PBcRplusDovetail_9695	T	TAAAAGAAAAAAAAAAGATAGTTGTAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTATGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAATAACAATAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_11038:HG2_PB_PB10Xdip_24562:HG2_Ill_breakscan11_3732:HG3_PB_SVrefine2Falcon1Dovetail_4358:HG2_PB_SVrefine2PBcRplusDovetail_9695:HG2_PB_SVrefine2PB10Xhap12_5246;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9695;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0247204;ClusterMaxSizeDiff=0.0247204;ClusterMaxEditDist=0.0353149;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=1692;DistBack=21;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1312;REFWIDENED=6:109971152-109972463;PctSeqSimilarity=0.995;PctSizeSimilarity=0.9901;PctRecOverlap=0.9906;SizeDiff=-17;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4755.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:35:1|0:2:11:17:1:./.:0:0:0:0:0/1:24:6:0/1:58:184:.:1727:.
chr6	110626740	HG2_Ill_MetaSV_4439	C	CAAAAGAAGACATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_24565:HG2_PB_pbsv_7196:HG4_PB_HySA_10631:HG4_PB_pbsv_7196:HG3_PB_SVrefine2Falcon1Dovetail_4360:HG2_PB_HySA_13328:HG2_PB_SVrefine2PB10Xhap12_5249:HG2_PB_SVrefine2PBcRplusDovetail_9697:HG4_Ill_MetaSV_4627:HG4_Ill_GATKHCSBGrefine_5091:HG2_Ill_MetaSV_4439:HG2_Ill_GATKHCSBGrefine_5016:HG2_PB_SVrefine2Falcon1plusDovetail_10418;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5016:HG2_Ill_MetaSV_4439:HG4_Ill_GATKHCSBGrefine_5091:HG4_Ill_MetaSV_4627;NumExactMatchSVs=4;ClusterMaxShiftDist=0.169697;ClusterMaxSizeDiff=0.169697;ClusterMaxEditDist=0.254438;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=311;DistBack=2887;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=6:110626741-110626754;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4756.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:47:0|1:28:0:1:44:./.:0:0:0:0:0/1:33:19:0/1:6:25:.:.:.
chr6	110987307	HG3_PB_HySA_11043	C	CAAAGAATCTTTACAGTTGCCGGGCGCGGTGGCTCACGCCTGTTAATCCCAGCACTTTGGGGAGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCAGCTACTCGGAGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGCGGAGATTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_pbsv_7197:HG3_PB_HySA_11043:HG3_PB_pbsv_6978:HG4_PB_SVrefine2Falcon1Dovetail_4351:HG4_PB_pbsv_7197:HG2_PB_SVrefine2Falcon1plusDovetail_10419:HG4_PB_HySA_10633;NumClusterSVs=7;ExactMatchIDs=HG3_PB_HySA_11043;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0914286;ClusterMaxSizeDiff=0.0857143;ClusterMaxEditDist=0.31768;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=340;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=350;REFWIDENED=6:110987308-110987657;PctSeqSimilarity=0.9809;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:39:./.:22:13:7:5:./.:0:0:0:0:0/1:15:12:0/1:10:18:.:.:.
chr6	111487550	HG2_10X_SVrefine210Xhap12_5151	A	ACAGTTTGGGGGATGCATCCAAGGGCAGTATCCTGTGGTACAGGGACACAATTACCCATCCATGAAGAGAAGACAGAAGATGAAAAAGAAGACATTTATTTCAAAGGAGTCCCAGTGATTCAGGATGCATTCAAAAGAAGTACGGACTGAAGATGGCTGGTTACCCACCTGGAAAGAGGGGAAAAAGGCATCCTTTAGTTCCCGTCTTTTCCCAGCATATACTTAGGGTACATAAGGGGGAGAAAGAAAAGGTGTCCACTTTCTTTCTTCCATCTTTGTATCTCCGAGTTCCGGTGACCTTGGCAGGTGCTGCCCATGGATGCCAACACGGCTTTCACCCGTGCGGAACAGGGAGGCCTAGAGGGTAGGAATTATCTGTACTCACCTACCCGCTGCCTATCCTCCCTGCTGTCCGTAACGTTTGAGTTTCCTAGACCTCATCTATGCCATAGATACAAGCATGACCTCTTTTTATGAAGCAAGGGTTTAATTGGCAGGAATTAGTCCTACTCACCTGTGCTGTGTCCCTTGACTTTCATTGCCATCTGCTTCTCGATCCCTCAGATCCAGTTTTTCTTTCTAGGGCTTCAACCTGAAGCTCGAAATTGAGTTTGGGACAAAAAGGTGCCTCAGGAGGGTGCATGGGCTCATTAAGTTAGGGAGTCCCATGAATTTGGGTCCTGGCCTAGTAAGATGCTTTCCAAAAGGACAAAAGAAAACCCTTGCATGGAAAAGCTCTCTGTATTCACAGGGCTGTGTTTAACTCCTGATACTGTGGAGAAAAGACAAAAAACAGCTTAAGTACAAGAAGGGGGAAGTGCCTGGGAGAAAAAGCCTCTTGCTCTATGCAAATGGGTTCCTTCAACAGGGAAAAAAAAGACACTTCTAATCCCTGTATCCTCCTTGCCTCTAAGAACAGATGGAAACTGCATTGTTCTGAATTGCATATCTGACAGCTGGGCCAAATGCTCATTCTCCCCAGTAATATCTCTGTAGTTTGCAGCAACACTCTTAACATTGTAAAAGAAGAGATAGGTGCCATGACAGACCCCCCAAAAAGAAGGAAAATGTGGTAGAAAAAACTGGATTAGAACAAGGTTGACATTCCCAACCCTTGAGAGCAATGGGGTGAAGGGTGGGTGTAGGGGTCCTCTCCAGCATCCTGTCCTCTGTAGCTGCACCATTCACTCTTAATTGGCTCACCAGAGGTTCAGTGCTTCATCTGCCTTCAGCACAAGTCTGAGGACAAGAAGCCTTGGAAATGAAAGTGAAAGAGTTTAGGTCTGCATTTACTCACCCTTCAGGGATCCCGGATGAGCCCCGAAACTGGGATTACAGTTGTGAGCCATCATGCCTGGATTCCAATATTTTCTTCTAGAAGTTTTATAGTTTTCAGTTTTACATTTAAGTTCTATGATCCATTTTGAGGTGATGTTTTATATGGTGTAAGGTAGGGATCAAATTTCATTGCTTCCTGTATTTTTAAAGCTCTGTTATTAGGTATATATACATTTATAATTGTTATAGTTTCCTGATGCCTTGACACTTTTACCATTATGAAGTATTCCTCTTCATTTCTAGTGATACTTCTTGTCTCAAAGTCTGTCTTGTCTAATATTAGTATAGCCACCTTAGGCTTTTAGGCCCAGTGTTTACATGTGATATCTTTTTCCATCTGTTTATTTTTAACTTGTTTGCCTTTGAATTTAAAATGTATCTCTAAAAGGATATAATTAGTTCTTACGTCTTTATCCAGTCAGACAATCTTTGCCATTTGATTAAAGTCTTTAGTCTATTTTTATTTAATGTAAAAATTGAGGCCAGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAATCCCATCTCTATTAAAAATACAAAAATTAGCCAGGTGCGGTGGCACGTGCCTGTAAAGCCAGCTACTCGAGAGGCTGAGGCAGGAGAATCACTTGAACCTAGGAGGCAGAGGTTGCCGTGAGGTGAGATCATGCCACTGCACTCCAGCTTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAATGATATGGCCATATCAATTTAGGTCTTTTTAAATTTAATGACATTTAGGTCAATTTTCATTTAATGTAATAATTGATATGGCCATATCATTTAGGTCTGCCATTTTGCTATTTGTTTTCTTTTTGTCTCATCTACCTTTTGTTCTTCTGTTCCTTCTTCTCTGCTTGCCTTTTCATTAATCAAATAATTTTTAGTAGTCAATTTTAATTCCTTGATTGGCTTTCTAGCTATATCTCTGTGCATAATTTTTTAGTGCTTTCTTTGAGTATTACAATATGCATCTTTAAGTCATTCCACTCTATTTTAAGTTATATACCCATTTACATCCATCTTTAATGCTGTTGTTTTCACATATTTATTTATTATAACATCTATATATAGTGTTATAGTTTTTGTTTAAACAGTAATTTAAAGTTATCCTTGTAAAGAAATTATGAGGAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATCCTTCCTTTGGACCCAAGTTGCCAGTGGTGTCATTCTCTTCAGCCTGAAGAACTTTATTTAACATTCTTGTAGTGTAAATTTCCTAGTGACAGATTCTCTCCATTTAAAGAAATCTTTATTTTGCCTTCATTTTTGAAGGCTAGTTCAAAAGGCTGGATATAGAATTCTTGGTTATTTTCCACCACTTTCAGCACTATCAATATGAAAGTTCCAATGTCTTCTGTCCCTTATTATTTACAAGAGGCCACCTGTTAATGATATCATTGTTCTCTCTAGATATATTATTTTTCTCTGCTTTCAAAATTTTCTTTTTGGCATTCAGCAGTTTGACTGTGATAAGCTTAGGAATCATTTTCTTAGTGTTTATCTTGCTGGGGGGGTCTTTGAACTTCTTGGATCTATAAATTAAAGTTTTTCACACAATTTGCAATTTTTATTTTGCGCTGTTCTTTTTATTTGTTTGTTTGCTTTTTACAGTGTCTTCCTCTGTCATCCAGGCTGGAGTGCAGTGGCACAATCGTAGCTCACTGAAGCCTCAACCTCCCAGGCTCAAGTGATCCTCCCCTCAGCTTCCTGAGTAGTTGGGACCACAGGTGGTGCATGATATCACACTTAGCTTTTTTTTTTTTTTTTTTGCTGTAAGGATGAGGTCTCACTATTTTGTTCAGGCTGGTCTCGAATATCTGGGCTCAAGTGATCCTCCTGCCTTGGCCTCCCAAAGTGCTGGGAATATAAGCATGAGCCACTGTACCCAGCCCCATTATTTCTTCAAAATGACCCACATTTTTTCCTAGAGATCCATAGGTCTCTAAGACTTAGTTAATTTTGTTTAATATTATTCTCTCACCGTGAGACAGGATTTGCAATGTGAACAAAGGCCTGCTGTCTTTAGATTGGGTAATTTCTTTATATTGGGTAATTTCTATCTCCAATACTTCACCCTTCAAAAGTATGACTGAAAAATGCATTCAGTAACTATCTGTAGTAGGGTTTGCATGACCACTTTATTCCAATGCCATAAACAGAGGTTGATTAGCAAATATTTTTAAAGCCACTCTTAAGTGAAATATAACTACCAAATAACCTTTAGGATGGCAATAAAATGGTCAAGGCAAGAGTACAGTCTATCCACTCCTGAATTTTTATATAGTTTCCAAACAGTTTCATGCCCCAGGAATTACTGGGACTTCGGTAAATAATATTTTGCATTTTAATATCTGTTTTGCATACTATTATTTTATATAATTTATGCTATTAGACTGATATTGAGTTATAACAGAGGAAAGATACCAGTATACTTCAAAAGTATGACTGGAAAATGCATTCAAAAGGTTCGCTTAGCAGATTGGAGATGAAAGATAAGAAAGGTCTGGGAACTTTGAAGGTAGAAATTACCCAATCTTTAGATACATACTTTTCATCTCCAGAATTTTCTCTTTTTTTATAGTTTACATTTTGTTTTTGAGATCCCCTATCTCTTCACTAAGTAAGATCACTTCATATCTTAAATTCTTTGAAAAATATTATTTTCTAATTCATCTAACATTTATAATAGAAACTTTGAAATCTTTGTTTGCTAAATTCAATGGCTGAGCCCTTCAGAGTCTGTTTTTATTGATTGCCTGTTTGTTTGCGTGCCTCATAATTTTTGGTTGAAACTTGAACATGTAGATAATATTTTGAAGTAACTCTGATTCTACTGTGTTAATCCAAGGATTATTGAGTTTTTGTTCCTAGCAGATAGCTTGCCGGAGCTCACATTGCAAATCCTGTCTCACTGTGGTGTGCGGCGGCTGATATCTCTGCTTAGTTCTTATAACTTTCGGATGCTGCCTTTCTTTATTCTGGTTTCTGTTCAGTCTACCAAGCATCTGCACATTTTATTGGCCCTCTAGAAAGCCCACAGCTTTGTAATTCTTCTTGCAACTGTAGCTTTTCAAACTCTCCCCCAAATTCTATCAGTTTTT	20	PASS	ClusterIDs=HG4_PB_HySA_10636:HG2_PB_pbsv_7200:HG2_PB_PB10Xdip_24567:HG2_Ill_breakscan11_3734:HG4_PB_SVrefine2Falcon1Dovetail_4352:HG2_PB_SVrefine2Falcon1plusDovetail_10420:HG4_Ill_SVrefine2DISCOVARDovetail_5337:HG2_PB_SVrefine2PBcRplusDovetail_9699:HG2_Ill_SVrefine2DISCOVARplusDovetail_11390:HG2_10X_SVrefine210Xhap12_5151:HG4_PB_SVrefine2PBcRDovetail_3553:HG2_PB_SVrefine2PB10Xhap12_5251;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5151:HG2_Ill_SVrefine2DISCOVARplusDovetail_11390:HG2_PB_SVrefine2PBcRplusDovetail_9699:HG4_Ill_SVrefine2DISCOVARDovetail_5337;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0400129;ClusterMaxSizeDiff=0.0393675;ClusterMaxEditDist=0.106479;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=4566;DistBack=24317;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=6:111487551-111487553;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4758.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:58:0|1:32:0:0:36:./.:0:0:0:0:0/1:28:17:0/1:194:304:.:4445:.
chr6	112354370	HG2_PB_SVrefine2PBcRplusDovetail_9700	A	AATCCCTTCCCCTCTCTATCCCATCCCTCGTATATCCCTTCCCCCCGTATATCCCTTCCCTCGTATATCCCATCCCCCGTATATACTTTCCCCCATATATCTCTTCCCCCGTATATCCTGTCCCCCGTATATCCCATTCCCTGTATACCCCTTCCCCTGTCTATCCCTTCCCCTATATATCCCTTACCCTCGCTATCCCTTCCCCCGTATATCCTGTCCCCCATCTATCCCTTCCCCCGTCTATCCCTTCCCCCGTATATCGCTTCCCCTGTCTATCCCTTCCCCTGTCTATCTCTTCCCCTATATATCCCTTCCCCTGTATATCCCTTCCCCTGTCTATCCCTTCCCCTGTCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9700:HG3_PB_HySA_11048:HG4_PB_pbsv_7203:HG3_PB_pbsv_6979:HG2_PB_PB10Xdip_24568:HG2_PB_pbsv_7202:HG2_PB_HySA_13336:HG2_PB_SVrefine2PB10Xhap12_5252:HG2_PB_SVrefine2Falcon1plusDovetail_10421:HG4_PB_SVrefine2Falcon1Dovetail_4353;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9700:HG4_PB_SVrefine2Falcon1Dovetail_4353;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0683995;ClusterMaxSizeDiff=0.0629275;ClusterMaxEditDist=0.276882;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=353;DistBack=119209;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=535;REFWIDENED=6:112354371-112354905;PctSeqSimilarity=0.9624;PctSizeSimilarity=0.9806;PctRecOverlap=0.615;SizeDiff=-7;StartDistance=-135;EndDistance=-135;GTMatch=0;TruScore=85;MatchId=4759.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:88:1/1:2:14:0:8:./.:0:0:0:0:./.:0:6:1/1:2:38:.:.:.
chr6	112894417	HG4_Ill_Krunchall_10756	A	ATATTAATAATATGTTATATTAATAATATGTTATATTATTTATGTTATATTATTAATAATATGTTATAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9543:HG4_PB_HySA_10644:HG4_Ill_svaba_9435:HG4_PB_pbsv_7205:HG4_Ill_Krunchall_10756:HG4_Ill_GATKHC_12107:HG4_Ill_GATKHCSBGrefine_5099:HG4_Ill_250bpfermikitraw_10144:HG4_Ill_150bpfermikitraw_9737:HG2_Ill_svaba_9345:HG2_Ill_Krunchall_10429:HG2_Ill_GATKHC_12069:HG2_Ill_GATKHCSBGrefine_5023:HG2_Ill_250bpfermikitraw_10135;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9543:HG4_Ill_svaba_9435:HG4_Ill_Krunchall_10756:HG4_Ill_GATKHC_12107:HG4_Ill_GATKHCSBGrefine_5099:HG4_Ill_250bpfermikitraw_10144:HG4_Ill_150bpfermikitraw_9737:HG2_Ill_svaba_9345:HG2_Ill_Krunchall_10429:HG2_Ill_GATKHC_12069:HG2_Ill_GATKHCSBGrefine_5023:HG2_Ill_250bpfermikitraw_10135;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0699301;ClusterMaxSizeDiff=0.0699301;ClusterMaxEditDist=0.237762;PBcalls=2;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=-1;DistForward=53989;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=272;REFWIDENED=6:112894265-112894536;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4762.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:31:0|1:43:3:2:22:./.:0:0:0:0:0/1:29:32:./.:.:.:.:.:.
chr6	114548397	HG3_Ill_MetaSV_4618	T	TAAGATATACTTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_10658:HG2_PB_pbsv_7217:HG3_PB_pbsv_6988:HG2_Ill_breakscan11_3738:HG3_PB_HySA_11067:HG4_Ill_GATKHCSBGrefine_5111:HG3_Ill_MetaSV_4618:HG3_Ill_GATKHCSBGrefine_4984:HG2_PB_SVrefine2Falcon1plusDovetail_10426:HG2_Ill_MetaSV_4442:HG4_PB_SVrefine2Falcon1Dovetail_4358;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_MetaSV_4442:HG2_PB_SVrefine2Falcon1plusDovetail_10426:HG3_Ill_GATKHCSBGrefine_4984:HG3_Ill_MetaSV_4618:HG4_Ill_GATKHCSBGrefine_5111;NumExactMatchSVs=5;ClusterMaxShiftDist=0.070229;ClusterMaxSizeDiff=0.0641221;ClusterMaxEditDist=0.176912;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=319;DistBack=65679;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=6:114548398-114548411;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4764.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:48:./.:7:16:22:10:./.:0:0:0:0:0/1:27:10:0/1:5:32:.:.:.
chr6	115243058	HG3_Ill_Krunchall_10188	G	GTTCTAAGTCTCTTGAGAAATACCCAAACTGCTTTCCACAGTGCCTGAACTAATTTACATTTCCACCAACTGTGTA	20	PASS	ClusterIDs=HG2_PB_pbsv_7220:HG2_PB_PB10Xdip_24575:HG4_PB_pbsv_7218:HG3_PB_pbsv_6991:HG4_Ill_manta_1812:HG4_Ill_Krunchall_10776:HG4_Ill_GATKHC_12129:HG4_Ill_GATKHCSBGrefine_5114:HG4_Ill_250bpfermikitraw_10163:HG4_Ill_150bpfermikitraw_9754:HG3_Ill_manta_1722:HG3_Ill_Spiral_7950:HG3_Ill_Krunchall_10188:HG3_Ill_GATKHCSBGrefine_4987:HG3_Ill_250bpfermikitraw_9840:HG3_Ill_150bpfermikitraw_9588:HG2_Ill_manta_2091:HG2_Ill_SpiralSDKrefine_15045:HG2_Ill_Krunchall_10457:HG2_Ill_GATKHC_12092:HG2_Ill_GATKHCSBGrefine_5035:HG2_Ill_250bpfermikitraw_10155:HG2_Ill_150bpfermikitraw_9564;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9564:HG2_Ill_250bpfermikitraw_10155:HG2_Ill_GATKHCSBGrefine_5035:HG2_Ill_GATKHC_12092:HG2_Ill_Krunchall_10457:HG2_Ill_SpiralSDKrefine_15045:HG2_Ill_manta_2091:HG3_Ill_150bpfermikitraw_9588:HG3_Ill_250bpfermikitraw_9840:HG3_Ill_GATKHCSBGrefine_4987:HG3_Ill_Krunchall_10188:HG3_Ill_Spiral_7950:HG3_Ill_manta_1722:HG4_Ill_150bpfermikitraw_9754:HG4_Ill_250bpfermikitraw_10163:HG4_Ill_GATKHCSBGrefine_5114:HG4_Ill_GATKHC_12129:HG4_Ill_Krunchall_10776:HG4_Ill_manta_1812;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0903226;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.291139;PBcalls=4;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=75;DistBack=-1;DistForward=24856;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=6:115243057-115243060;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4765.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:1:17:0:19:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr6	117758757	HG3_Ill_GATKHCSBGrefine_4995	G	GTGATGCTGGTGTAAATAAACCTACTGCACTGCTAGTTGCATAAAAGTATTACATATACAATTATGTAGAGTACATAATACT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9580:HG3_PB_pbsv_7003:HG3_PB_HySA_11085:HG2_PB_pbsv_7229:HG2_PB_HySA_13390:HG3_Ill_svaba_9453:HG3_Ill_GATKHC_12076:HG3_Ill_GATKHCSBGrefine_4995:HG3_Ill_250bpfermikitraw_9859:HG3_Ill_150bpfermikitraw_9606:HG2_Ill_svaba_9378:HG2_Ill_manta_2094:HG2_Ill_Krunchall_10473:HG2_Ill_GATKHC_12110:HG2_Ill_GATKHCSBGrefine_5041:HG2_Ill_250bpfermikitraw_10171;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9580:HG3_Ill_svaba_9453:HG3_Ill_GATKHC_12076:HG3_Ill_GATKHCSBGrefine_4995:HG3_Ill_250bpfermikitraw_9859:HG3_Ill_150bpfermikitraw_9606:HG2_Ill_svaba_9378:HG2_Ill_manta_2094:HG2_Ill_Krunchall_10473:HG2_Ill_GATKHC_12110:HG2_Ill_GATKHCSBGrefine_5041:HG2_Ill_250bpfermikitraw_10171;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0710059;ClusterMaxSizeDiff=0.0591716;ClusterMaxEditDist=0.241379;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=81;DistBack=75;DistForward=21797;DistMin=75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=85;REFWIDENED=6:117758758-117758842;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4766.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:28:0|1:44:3:1:24:./.:0:0:0:0:0/1:15:9:./.:.:.:.:.:.
chr6	117798628	HG3_Ill_GATKHCSBGrefine_4998	A	AAAGAGTCAAGTATTCGCCCATAACTGCCATTAGCCTTTCCTAAAAGTATATTTCCTACCTAGTTATTATACACAAAGTAGTTTTTGATACCCAAGAGTCAAAACATCAAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10434:HG3_PB_HySA_11086:HG2_10X_SVrefine210Xhap12_5170:HG4_PB_SVrefine2Falcon1Dovetail_4366:HG3_PB_pbsv_7005:HG3_Ill_SVrefine2DISCOVARDovetail_5503:HG2_PB_pbsv_7231:HG3_Ill_MetaSV_4628:HG3_Ill_GATKHCSBGrefine_4998:HG3_Ill_250bpfermikitraw_9862:HG2_Ill_GATKHCSBGrefine_5044:HG2_PB_HySA_13392;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5044:HG3_Ill_250bpfermikitraw_9862:HG3_Ill_GATKHCSBGrefine_4998:HG3_Ill_MetaSV_4628:HG3_Ill_SVrefine2DISCOVARDovetail_5503;NumExactMatchSVs=5;ClusterMaxShiftDist=0.122271;ClusterMaxSizeDiff=0.112554;ClusterMaxEditDist=0.273504;PBcalls=6;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=111;DistBack=17970;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=6:117798629-117798741;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4767.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:22:0|1:26:1:2:21:./.:0:0:0:0:0/1:17:13:./.:.:.:.:.:.
chr6	119261990	HG2_PB_SVrefine2PB10Xhap12_5270	C	CAGGATCTCTGGACCCACCTGGGGCTTGAGGGAACTTGTCGATACCCTGAAGGGAAGGATGCAAGCCTGGCTGGCTTCACCTACTGCTAATTATAGAGCCCTAGGACCTTGAGCAAACATAGGCAGTAGCCAGGTAGTGGTTACTGCAGGCCTTGGCCAAGCCCCAGTGCTGTGCTGGCTTCAGGTCTAACCCAGCATAATCCCAGTGGTTGTGGCCACAAGGGTGCTTGTGTCACCCCTTCTCCAGCTCCAAGCAGCTCAGAACAGAGAGAGAGAGAGAGGGAAGGGAGACTCTGTTTGTTTGGGAGATAGTAAGGTAAAAGAATGAG	20	PASS	ClusterIDs=HG2_PB_HySA_13408:HG4_PB_pbsv_7237:HG3_PB_pbsv_7015:HG2_PB_pbsv_7238:HG2_PB_HySA_13409:HG3_PB_HySA_11107:HG2_PB_PB10Xdip_24587:HG4_Ill_MetaSV_4635:HG2_10X_SVrefine210Xhap12_5174:HG4_PB_HySA_10692:HG2_PB_SVrefine2Falcon1plusDovetail_10437:HG4_PB_SVrefine2PBcRDovetail_3557:HG4_PB_SVrefine2Falcon1Dovetail_4372:HG2_PB_SVrefine2PBcRplusDovetail_9715:HG2_PB_SVrefine2PB10Xhap12_5270;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5270:HG2_PB_SVrefine2PBcRplusDovetail_9715:HG4_PB_SVrefine2Falcon1Dovetail_4372:HG4_PB_SVrefine2PBcRDovetail_3557;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0835821;ClusterMaxSizeDiff=0.0716418;ClusterMaxEditDist=0.186115;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=328;DistBack=5250;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=330;REFWIDENED=6:119261991-119262320;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.997;PctRecOverlap=0.1368;SizeDiff=1;StartDistance=-283;EndDistance=-283;GTMatch=0;TruScore=70;MatchId=4768.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:./.:0:3:0:17:./.:0:0:0:0:1/1:0:43:1/1:2:28:.:.:.
chr6	120380253	HG3_Ill_GATKHCSBGrefine_5006	T	TCCCTGCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCGCTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_13415:HG3_PB_pbsv_7018:HG4_PB_pbsv_7239:HG2_PB_PB10Xdip_24588:HG2_PB_pbsv_7240:HG4_PB_HySA_10697:HG3_PB_assemblyticsfalcon_23468:HG2_PB_assemblyticsPBcR_22851:HG2_Ill_MetaSV_4449:HG4_PB_SVrefine2PBcRDovetail_3559:HG4_Ill_MetaSV_4637:HG4_Ill_GATKHCSBGrefine_5127:HG3_Ill_MetaSV_4630:HG3_Ill_GATKHCSBGrefine_5006:HG2_PB_SVrefine2PBcRplusDovetail_9717:HG2_PB_SVrefine2PB10Xhap12_5272:HG2_PB_SVrefine2Falcon1plusDovetail_10439:HG2_Ill_GATKHCSBGrefine_5049:HG2_10X_SVrefine210Xhap12_5177:HG4_PB_SVrefine2Falcon1Dovetail_4374:HG3_PB_HySA_11113;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5177:HG2_Ill_GATKHCSBGrefine_5049:HG2_PB_SVrefine2Falcon1plusDovetail_10439:HG2_PB_SVrefine2PB10Xhap12_5272:HG2_PB_SVrefine2PBcRplusDovetail_9717:HG3_Ill_GATKHCSBGrefine_5006:HG3_Ill_MetaSV_4630:HG4_Ill_GATKHCSBGrefine_5127:HG4_Ill_MetaSV_4637:HG4_PB_SVrefine2PBcRDovetail_3559;NumExactMatchSVs=10;ClusterMaxShiftDist=0.104265;ClusterMaxSizeDiff=0.104265;ClusterMaxEditDist=0.255452;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=313;DistBack=1864;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=6:120380254-120380263;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:86:1/1:1:15:0:17:./.:0:0:0:0:1/1:0:24:1/1:1:69:.:.:.
chr6	120568246	HG2_Ill_GATKHCSBGrefine_5050	T	TGACTCTCAATTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3740:HG3_PB_pbsv_7019:HG4_PB_pbsv_7240:HG3_PB_HySA_11114:HG2_PB_pbsv_7241:HG4_PB_HySA_10698:HG3_PB_assemblyticsfalcon_23469:HG2_PB_assemblyticsPBcR_22852:HG4_PB_SVrefine2Falcon1Dovetail_4375:HG4_PB_SVrefine2PBcRDovetail_3560:HG4_Ill_manta_1817:HG4_Ill_GATKHCSBGrefine_5128:HG3_Ill_manta_1728:HG3_Ill_GATKHCSBGrefine_5007:HG2_Ill_GATKHCSBGrefine_5050:HG2_10X_SVrefine210Xhap12_5178:HG2_PB_SVrefine2PBcRplusDovetail_9718:HG2_PB_SVrefine2PB10Xhap12_5273:HG2_PB_SVrefine2Falcon1plusDovetail_10440;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5178:HG2_Ill_GATKHCSBGrefine_5050:HG3_Ill_GATKHCSBGrefine_5007:HG3_Ill_manta_1728:HG4_Ill_GATKHCSBGrefine_5128:HG4_Ill_manta_1817:HG4_PB_SVrefine2PBcRDovetail_3560;NumExactMatchSVs=7;ClusterMaxShiftDist=0.144201;ClusterMaxSizeDiff=0.144201;ClusterMaxEditDist=0.229921;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=319;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:120568247-120568262;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:86:1/1:0:25:0:33:./.:0:0:0:0:1/1:0:23:1/1:2:87:.:.:.
chr6	120622978	HG3_Ill_Krunchall_10226	T	TCACAGTTCCAGCCACGTGGAACTGTGGGTAAACTAAAGCTCTTTCCCAAGGAAAAAGGTTTCCCAAGGAAAGAGGTTTAGTTTACC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5179:HG4_PB_pbsv_7241:HG3_PB_pbsv_7020:HG2_PB_HySA_13416:HG2_PB_pbsv_7242:HG4_Ill_manta_1818:HG2_Ill_breakscan11_3741:HG4_Ill_Krunchall_10806:HG4_Ill_GATKHC_12165:HG4_Ill_GATKHCSBGrefine_5129:HG4_Ill_Cortex_3246:HG4_Ill_250bpfermikitraw_10190:HG4_Ill_150bpfermikitraw_9782:HG3_Ill_manta_1729:HG3_Ill_Spiral_7978:HG3_Ill_Krunchall_10226:HG3_Ill_GATKHC_12101:HG3_Ill_GATKHCSBGrefine_5008:HG3_Ill_Cortex_3262:HG3_Ill_250bpfermikitraw_9877:HG2_Ill_manta_2096:HG2_Ill_SpiralSDKrefine_15064:HG2_Ill_Krunchall_10487:HG2_Ill_GATKHC_12127:HG2_Ill_GATKHCSBGrefine_5051:HG2_Ill_Cortex_7934:HG2_Ill_250bpfermikitraw_10187:HG4_PB_SVrefine2PBcRDovetail_3561:HG4_Ill_SVrefine2DISCOVARDovetail_5366:HG3_Ill_SVrefine2DISCOVARDovetail_5512:HG2_PB_SVrefine2PBcRplusDovetail_9719:HG2_PB_SVrefine2Falcon1plusDovetail_10441:HG2_Ill_SVrefine2DISCOVARplusDovetail_11419;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10187:HG2_Ill_Cortex_7934:HG2_Ill_GATKHCSBGrefine_5051:HG2_Ill_GATKHC_12127:HG2_Ill_Krunchall_10487:HG2_Ill_SpiralSDKrefine_15064:HG2_Ill_manta_2096:HG3_Ill_250bpfermikitraw_9877:HG3_Ill_Cortex_3262:HG3_Ill_GATKHCSBGrefine_5008:HG3_Ill_GATKHC_12101:HG3_Ill_Krunchall_10226:HG3_Ill_Spiral_7978:HG3_Ill_manta_1729:HG4_Ill_150bpfermikitraw_9782:HG4_Ill_250bpfermikitraw_10190:HG4_Ill_Cortex_3246:HG4_Ill_GATKHCSBGrefine_5129:HG4_Ill_GATKHC_12165:HG4_Ill_Krunchall_10806:HG4_Ill_manta_1818;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0685714;ClusterMaxSizeDiff=0.0342857;ClusterMaxEditDist=0.238636;PBcalls=7;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=86;DistBack=-9;DistForward=4;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=6:120622974-120622987;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4771.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:81:1/1:3:38:1:40:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr6	120764816	HG2_PB_SVrefine2PB10Xhap12_5274	G	GAAAATAAATACATTGAATTTTTAAAATCTGATATTGGTGAGAGTAAACAGCTGGTTAACTCCAAGGAAAGCATAATTTTCCATGTTAAATGTTATTTAACAT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_5052:HG4_PB_pbsv_7242:HG4_PB_HySA_10700:HG2_PB_pbsv_7243:HG3_PB_HySA_11119:HG3_PB_pbsv_7023:HG2_PB_assemblyticsPBcR_22855:HG2_10X_SVrefine210Xhap12_5181:HG4_PB_SVrefine2PBcRDovetail_3562:HG4_PB_SVrefine2Falcon1Dovetail_4376:HG4_Ill_svaba_9474:HG4_Ill_manta_1819:HG4_Ill_SVrefine2DISCOVARDovetail_5367:HG4_Ill_MetaSV_4639:HG4_Ill_GATKHC_12170:HG4_Ill_GATKHCSBGrefine_5130:HG4_Ill_250bpfermikitraw_10195:HG4_Ill_150bpfermikitraw_9787:HG3_Ill_svaba_9466:HG3_Ill_GATKHC_12103:HG3_Ill_GATKHCSBGrefine_5009:HG2_PB_SVrefine2PBcRplusDovetail_9720:HG2_PB_SVrefine2PB10Xhap12_5274:HG2_PB_SVrefine2Falcon1plusDovetail_10442:HG2_Ill_svaba_9389:HG2_Ill_SVrefine2DISCOVARplusDovetail_11420:HG2_Ill_MetaSV_4451:HG2_Ill_GATKHC_12132;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5052:HG4_PB_SVrefine2PBcRDovetail_3562:HG4_PB_SVrefine2Falcon1Dovetail_4376:HG4_Ill_svaba_9474:HG4_Ill_manta_1819:HG4_Ill_SVrefine2DISCOVARDovetail_5367:HG4_Ill_MetaSV_4639:HG4_Ill_GATKHC_12170:HG4_Ill_GATKHCSBGrefine_5130:HG4_Ill_250bpfermikitraw_10195:HG4_Ill_150bpfermikitraw_9787:HG3_Ill_svaba_9466:HG3_Ill_GATKHC_12103:HG3_Ill_GATKHCSBGrefine_5009:HG2_PB_SVrefine2PBcRplusDovetail_9720:HG2_PB_SVrefine2PB10Xhap12_5274:HG2_PB_SVrefine2Falcon1plusDovetail_10442:HG2_Ill_svaba_9389:HG2_Ill_SVrefine2DISCOVARplusDovetail_11420:HG2_Ill_MetaSV_4451:HG2_Ill_GATKHC_12132;NumExactMatchSVs=21;ClusterMaxShiftDist=0.102326;ClusterMaxSizeDiff=0.102326;ClusterMaxEditDist=0.296651;PBcalls=11;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=102;DistBack=34627;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=107;REFWIDENED=6:120764817-120764923;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4772.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:20:71:1/1:8:27:6:33:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr6	120825233	HG2_Ill_SVrefine2DISCOVARplusDovetail_11422	T	TATGTTTTTATTAGCAGAGTGAGAATGGACTAATACAAATAGCTTTTTCCATCCTTTCATTTTTGACCTATTTTGCATCTTTGGATCTCTAATTAGTCTTTTGTAGAACAAATATAGTTTGATAATTTTTTTATTCCATTCTGTCAATCTTTGTCTTTTGATTGGATGGCTTAATCCATTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11422:HG3_PB_pbsv_7024:HG2_10X_SVrefine210Xhap12_5183:HG2_PB_pbsv_7244:HG2_10X_SVrefine210Xhap12_5182:HG3_Ill_SVrefine2DISCOVARDovetail_5514;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11422:HG3_Ill_SVrefine2DISCOVARDovetail_5514;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0539084;ClusterMaxSizeDiff=0.0537634;ClusterMaxEditDist=0.212202;PBcalls=2;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=180;DistBack=955;DistForward=20258;DistMin=955;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=186;REFWIDENED=6:120825234-120825419;PctSeqSimilarity=0.9947;PctSizeSimilarity=1;PctRecOverlap=0.9558;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=98;MatchId=4773.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:33:0|1:37:3:1:27:./.:0:0:0:0:0/1:8:14:./.:.:.:.:.:.
chr6	121077636	HG2_PB_SVrefine2PB10Xhap12_5276	T	TATCTTCCAGAAGTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4366:HG2_PB_pbsv_7245:HG2_PB_HySA_13423:HG4_PB_pbsv_7243:HG2_PB_assemblyticsPBcR_22859:HG2_PB_HySA_13422:HG4_PB_HySA_10704:HG4_Ill_GATKHCSBGrefine_5132:HG2_PB_SVrefine2PBcRplusDovetail_9721:HG4_PB_SVrefine2PBcRDovetail_3563:HG4_Ill_MetaSV_4640:HG2_PB_SVrefine2PB10Xhap12_5276:HG2_PB_SVrefine2Falcon1plusDovetail_10443:HG4_PB_SVrefine2Falcon1Dovetail_4377;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5276;NumExactMatchSVs=1;ClusterMaxShiftDist=0.154818;ClusterMaxSizeDiff=0.154818;ClusterMaxEditDist=0.199052;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=-1;DistForward=15;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:121077637-121077652;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:54:0|1:28:2:0:37:./.:0:0:0:0:0/1:26:14:0/1:9:21:.:.:.
chr6	121733159	HG2_PB_SVrefine2Falcon1plusDovetail_10445	C	CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10445:HG4_Ill_Krunchall_10823:HG2_PB_pbsv_7248:HG4_PB_pbsv_7246:HG4_Ill_SVrefine2DISCOVARDovetail_5372:HG3_PB_pbsv_7026;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10445:HG4_Ill_SVrefine2DISCOVARDovetail_5372;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.283186;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=55;DistBack=33908;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=70;REFWIDENED=6:121733160-121733229;PctSeqSimilarity=0.9713;PctSizeSimilarity=1;PctRecOverlap=0.4364;SizeDiff=0;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=80;MatchId=4775.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:22:0|1:20:6:0:12:./.:0:0:0:0:0/1:14:17:./.:.:.:.:.:.
chr6	121793187	HG2_PB_HySA_13430	T	TATCATTGACCCTAAGTAAACAGTACTAGGGGAATATGTATGTGTCTATTAACCAATGAATATACATATATCTATAGTTATATCTATCTATCTACCTATCTATCGTCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4381:HG3_PB_pbsv_7028:HG3_PB_HySA_11128:HG2_PB_pbsv_7250:HG2_PB_HySA_13430:HG2_PB_SVrefine2Falcon1plusDovetail_10446:HG2_10X_SVrefine210Xhap12_5186;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_13430:HG3_PB_HySA_11128;NumExactMatchSVs=2;ClusterMaxShiftDist=0.107623;ClusterMaxSizeDiff=0.0986547;ClusterMaxEditDist=0.210526;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=107;DistBack=5750;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=105;REFWIDENED=6:121793188-121793292;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9907;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:44:0|1:29:1:2:40:./.:0:0:0:0:0/1:27:19:./.:.:.:.:.:.
chr6	122161670	HG3_Ill_SVrefine2DISCOVARDovetail_5519	C	CAGGGAAGAACTCCCTGAGAAGGTAACATTGGAGCTTAGACTTGAATTTGAGAAGGAGCCACACTGACTTATATTTGGAGGAAGAGCTTTTCAGATAGATGGAGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5187:HG4_PB_pbsv_7249:HG2_PB_HySA_13434:HG3_PB_pbsv_7032:HG2_PB_PB10Xdip_24591:HG2_PB_pbsv_7253:HG4_PB_HySA_10711:HG3_PB_HySA_11133:HG4_PB_SVrefine2PBcRDovetail_3567:HG4_PB_SVrefine2Falcon1Dovetail_4382:HG4_Ill_SVrefine2DISCOVARDovetail_5376:HG4_Ill_250bpfermikitraw_10211:HG3_Ill_SVrefine2DISCOVARDovetail_5519:HG3_Ill_250bpfermikitraw_9890:HG2_PB_SVrefine2PBcRplusDovetail_9724:HG2_PB_SVrefine2PB10Xhap12_5280:HG2_PB_SVrefine2Falcon1plusDovetail_10448:HG2_Ill_SVrefine2DISCOVARplusDovetail_11431:HG2_Ill_250bpfermikitraw_10203;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5187:HG4_PB_SVrefine2PBcRDovetail_3567:HG4_PB_SVrefine2Falcon1Dovetail_4382:HG4_Ill_SVrefine2DISCOVARDovetail_5376:HG4_Ill_250bpfermikitraw_10211:HG3_Ill_SVrefine2DISCOVARDovetail_5519:HG3_Ill_250bpfermikitraw_9890:HG2_PB_SVrefine2PBcRplusDovetail_9724:HG2_PB_SVrefine2PB10Xhap12_5280:HG2_PB_SVrefine2Falcon1plusDovetail_10448:HG2_Ill_SVrefine2DISCOVARplusDovetail_11431:HG2_Ill_250bpfermikitraw_10203;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0744186;ClusterMaxSizeDiff=0.0651163;ClusterMaxEditDist=0.237443;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=104;DistBack=13219;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=106;REFWIDENED=6:122161671-122161776;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4777.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:2:33:2:16:./.:0:0:0:0:1/1:1:48:./.:.:.:.:.:.
chr6	122979992	HG2_Ill_GATKHCSBGrefine_5062	T	TCATTTGACAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3743:HG4_PB_pbsv_7253:HG2_PB_pbsv_7257:HG4_Ill_MetaSV_4645:HG3_PB_pbsv_7037:HG4_Ill_GATKHCSBGrefine_5141:HG3_Ill_MetaSV_4639:HG3_Ill_GATKHCSBGrefine_5030:HG2_PB_SVrefine2Falcon1plusDovetail_10451:HG2_Ill_MetaSV_4458:HG2_Ill_GATKHCSBGrefine_5062:HG4_PB_HySA_10714;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5062:HG2_Ill_MetaSV_4458:HG2_PB_SVrefine2Falcon1plusDovetail_10451:HG3_Ill_GATKHCSBGrefine_5030:HG3_Ill_MetaSV_4639:HG4_Ill_GATKHCSBGrefine_5141:HG4_Ill_MetaSV_4645;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0889571;ClusterMaxSizeDiff=0.0858896;ClusterMaxEditDist=0.242792;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=322;DistBack=-4;DistForward=-1;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=6:122979993-122980009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4778.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:39:1|0:3:27:28:2:./.:0:0:0:0:0/1:26:8:./.:3:27:.:.:.
chr6	123853937	HG2_PB_HySA_13450	A	AGAAAATATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTAGTTACATTGTATACATGTGCCATGCTGGTGCACTGCACCACTAATGTGTCATCTAGCATTAGGTTATATCTCCAATGCTATCCCTCCCCCCTCCCCGACCCACCACAGTCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTCTTAATCAGTCTATCATTGTTGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTTCAAATGGTATTTCTAGTTCTAGATCCCTGAGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGTTTTCTTCTAGGTTTTTATGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTTAAGGTGTAAGGAAGGGATCCAGTTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGATGGCATTGAATCTGTAAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGAGCATGGAATGTTTTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCCATCATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATCTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGAGTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCGCAGTATTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGTTGTGTTGTCTCTGCCCGGCTTTGTGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGACGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTCTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGTGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCAGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAAGTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATATATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATTAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTTGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTCCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCACTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCTC	20	PASS	ClusterIDs=HG2_PB_HySA_13450:HG2_PB_PB10Xdip_24597:HG3_PB_SVrefine2Falcon1Dovetail_4368:HG2_Ill_breakscan11_3744:HG2_PB_SVrefine2PBcRplusDovetail_9731;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_13450;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0057923;ClusterMaxSizeDiff=0.0057923;ClusterMaxEditDist=0.0162279;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=6052;DistBack=-2;DistForward=18410;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=6:123853938-123853943;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9987;PctRecOverlap=0.9987;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4779.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:55:./.:28:11:7:31:./.:0:0:0:0:0/1:37:12:0/1:196:619:.:5884:.
chr6	123924306	HG2_PB_SVrefine2Falcon1plusDovetail_10455	G	GTGTGCTAGTTTCCTAGTGTAATCAGCACCAAAAAAAAAAAAAAAAGGCATTAAACAAGAGAAGAATGCTTGTGTTTCTGAGTTTGTTTTTTCATGAAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5195:HG3_PB_pbsv_7043:HG2_Ill_breakscan11_3745:HG2_PB_pbsv_7263:HG2_PB_HySA_13452:HG3_Ill_svaba_9495:HG2_Ill_svaba_9418:HG3_Ill_manta_1736:HG3_Ill_Spiral_8004:HG3_Ill_GATKHCSBGrefine_5037:HG3_Ill_Cortex_3272:HG3_Ill_250bpfermikitraw_9909:HG3_Ill_150bpfermikitraw_9655:HG2_PB_SVrefine2Falcon1plusDovetail_10455:HG2_Ill_manta_2104:HG2_Ill_SpiralSDKrefine_15092:HG2_Ill_GATKHC_12167:HG2_Ill_GATKHCSBGrefine_5069:HG2_Ill_Cortex_7951:HG2_Ill_250bpfermikitraw_10222:HG2_Ill_150bpfermikitraw_9629;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5195:HG3_Ill_manta_1736:HG3_Ill_Spiral_8004:HG3_Ill_GATKHCSBGrefine_5037:HG3_Ill_Cortex_3272:HG3_Ill_250bpfermikitraw_9909:HG3_Ill_150bpfermikitraw_9655:HG2_PB_SVrefine2Falcon1plusDovetail_10455:HG2_Ill_manta_2104:HG2_Ill_SpiralSDKrefine_15092:HG2_Ill_GATKHC_12167:HG2_Ill_GATKHCSBGrefine_5069:HG2_Ill_Cortex_7951:HG2_Ill_250bpfermikitraw_10222:HG2_Ill_150bpfermikitraw_9629;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0788177;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.234146;PBcalls=4;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=98;DistBack=18765;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=6:123924307-123924309;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4780.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:36:0|1:36:1:1:35:./.:0:0:0:0:0/1:25:6:./.:.:.:.:.:.
chr6	125421413	HG2_PB_SVrefine2Falcon1plusDovetail_10459	T	TAAAAAAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGTAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_10735:HG4_PB_pbsv_7262:HG2_PB_HySA_13466:HG3_PB_pbsv_7049:HG4_PB_SVrefine2PBcRDovetail_3576:HG2_PB_pbsv_7267:HG2_Ill_MetaSV_4463:HG2_PB_SVrefine2PB10Xhap12_5293:HG3_Ill_GATKHCSBGrefine_5042:HG2_PB_SVrefine2Falcon1plusDovetail_10459:HG4_PB_SVrefine2Falcon1Dovetail_4394:HG3_PB_HySA_11161;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10459:HG3_Ill_GATKHCSBGrefine_5042;NumExactMatchSVs=2;ClusterMaxShiftDist=0.217755;ClusterMaxSizeDiff=0.217755;ClusterMaxEditDist=0.255973;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=311;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=6:125421414-125421421;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9936;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:53:0|1:21:3:1:32:./.:0:0:0:0:0/1:18:5:0/1:5:33:.:.:.
chr6	126070741	HG4_Ill_GATKHC_12219	G	GCGCCGGCTCTTGCGGCCGAGCAGAGTTGCGGCGTGGGAAAGAGCCGCTAGGAGCAGACCGCGCCGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11451:HG4_Ill_svaba_9513:HG2_Ill_svaba_9430:HG4_PB_HySA_10740:HG2_PB_pbsv_7272:HG4_Ill_Krunchall_10864:HG4_Ill_GATKHC_12219:HG4_Ill_GATKHCSBGrefine_5154:HG4_Ill_250bpfermikitraw_10240:HG4_Ill_150bpfermikitraw_9828:HG2_Ill_Krunchall_10537:HG2_Ill_GATKHC_12183:HG2_Ill_GATKHCSBGrefine_5075:HG2_Ill_250bpfermikitraw_10235:HG2_PB_HySA_13474:HG4_Ill_SVrefine2DISCOVARDovetail_5388:HG2_PB_SVrefine2Falcon1plusDovetail_10462;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10235:HG2_Ill_GATKHCSBGrefine_5075:HG2_Ill_GATKHC_12183:HG2_Ill_Krunchall_10537:HG4_Ill_150bpfermikitraw_9828:HG4_Ill_250bpfermikitraw_10240:HG4_Ill_GATKHCSBGrefine_5154:HG4_Ill_GATKHC_12219:HG4_Ill_Krunchall_10864;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0583942;ClusterMaxSizeDiff=0.0437956;ClusterMaxEditDist=0.18705;PBcalls=4;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=-71;DistForward=63;DistMin=-71;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=77;REFWIDENED=6:126070737-126070813;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:32:./.:1:6:3:1:./.:0:0:0:0:0/1:18:24:./.:.:.:.:.:.
chr6	127088188	HG2_10X_SVrefine210Xhap12_5204	T	TCTCCCTCCCTCCCTTCCCTTCGTCTCGCCTTTCCTTTGCTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5204:HG4_PB_pbsv_7277:HG2_PB_pbsv_7276:HG3_PB_HySA_11169:HG4_PB_HySA_10744:HG2_PB_PB10Xdip_24606:HG2_PB_HySA_13482:HG4_PB_SVrefine2PBcRDovetail_3584:HG4_Ill_SVrefine2DISCOVARDovetail_5394:HG2_Ill_GATKHC_12190:HG3_PB_pbsv_7054:HG3_Ill_SVrefine2DISCOVARDovetail_5540:HG4_PB_SVrefine2Falcon1Dovetail_4401:HG2_PB_SVrefine2PBcRplusDovetail_9741:HG2_Ill_SVrefine2DISCOVARplusDovetail_11457;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5204:HG2_PB_SVrefine2PBcRplusDovetail_9741:HG2_Ill_SVrefine2DISCOVARplusDovetail_11457;NumExactMatchSVs=3;ClusterMaxShiftDist=0.26506;ClusterMaxSizeDiff=0.26506;ClusterMaxEditDist=0.329268;PBcalls=10;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=89;DistBack=33522;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=105;REFWIDENED=6:127088189-127088293;PctSeqSimilarity=0.9572;PctSizeSimilarity=0.9888;PctRecOverlap=0.5618;SizeDiff=1;StartDistance=-39;EndDistance=-39;GTMatch=0;TruScore=83;MatchId=4783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:78:1/1:3:34:3:24:./.:0:0:0:0:./.:1:6:./.:.:.:.:.:.
chr6	127282685	HG2_Ill_SVrefine2DISCOVARplusDovetail_11458	T	TAAATAGTTACATAATGAATTGACCATTTGCCACAAGTAGGTGGGAAAAGAACAGAATAGTCTCAAGGAAAGGAGAAGGAATATAATAGTAAGAGAAAAAAAAAGAAATTAATAAATTAGAAAATGAAAATAATTGAACTGCTGAATAAATCCATGAACAAGTTTTTTTTTAACTACATAAATAAAAAATCTAATCA	20	PASS	ClusterIDs=HG2_PB_pbsv_7277:HG3_PB_pbsv_7056:HG2_PB_SVrefine2Falcon1plusDovetail_10465:HG2_PB_SVrefine2PBcRplusDovetail_9742:HG4_PB_assemblyticsfalcon_23063:HG3_Ill_manta_1739:HG3_Ill_SVrefine2DISCOVARDovetail_5541:HG3_Ill_MetaSV_4646:HG3_Ill_GATKHCSBGrefine_5050:HG3_Ill_Cortex_3276:HG3_Ill_250bpfermikitraw_9933:HG3_Ill_150bpfermikitraw_9674:HG2_Ill_manta_2110:HG2_Ill_SVrefine2DISCOVARplusDovetail_11458:HG2_Ill_MetaSV_4466:HG2_Ill_GATKHCSBGrefine_5079:HG2_Ill_Cortex_7960:HG2_10X_SVrefine210Xhap12_5206;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5206:HG2_Ill_Cortex_7960:HG2_Ill_GATKHCSBGrefine_5079:HG2_Ill_MetaSV_4466:HG2_Ill_SVrefine2DISCOVARplusDovetail_11458:HG2_Ill_manta_2110:HG3_Ill_150bpfermikitraw_9674:HG3_Ill_250bpfermikitraw_9933:HG3_Ill_Cortex_3276:HG3_Ill_GATKHCSBGrefine_5050:HG3_Ill_MetaSV_4646:HG3_Ill_SVrefine2DISCOVARDovetail_5541:HG3_Ill_manta_1739;NumExactMatchSVs=13;ClusterMaxShiftDist=0.184783;ClusterMaxSizeDiff=0.179348;ClusterMaxEditDist=0.222826;PBcalls=5;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=196;DistBack=107514;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:127282686-127282686;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:38:0|1:21:0:1:34:./.:0:0:0:0:0/1:21:11:./.:.:.:.:.:.
chr6	128326850	HG2_Ill_SVrefine2DISCOVARplusDovetail_11469	A	ACAAAGACATGTCCCATTCTTCATTCTCTGTGCTATTATTAAGTAAAAATGCAATGTGTAGCATTAACATATTTAGCAATATATTTATAACATTAATCAGAAGCTAATCTGAAGACTTTTAGAATAAGCCACTGCTAGAAAATTTCAAGTACACATGAATATATGGGATTAAATCATATACTGTGTAAGAAAAGTAGTGAGGAAAGTTTTAAAATATGGTATGGAAAGACATGAAAATTATCATCTTGGAATATTCACATGGTCAAATATTAAAAATGTGTTTTCTAATTAGAACCACATGGCATACTATCAACTAACTACAGCAATGCTTTATAAATGCAGAAAGGCATATGATTTAAGGGATTGGCTATTAACAGCATTAGAATTATGAACTACTCAAATATTGGCATGTTTATCTTACATATCATGGATGTAAAATATATTTTAGTTCTTGTGAATGTTACACATGAAACATCCAAGAAAAAGGGCTATTAAAGGCACATAAAATATTTAAATCACACTAACAAGAAAATTTATGTATAAATAAAGGCACTCTAAAAGCTTGTAATAGGCAAATTATGTTACTAAGTTTATGGCTGCAATTCATATTGCCTTGGAAATCTTTAGTTGTTTTAAGAACACCATTACCTTCACTAGATTATAAGCTAAGCCATTCTTTTCTGATCCTCATTAATATCCAAACCAGAGTAAATGTACTACAAATACTACAAAGGCTCATTTAAAAGATTGAGTTTATGTATAAAGGCTTTTCCTTTACAACCTTAATCTAGCAATTGGAGGACTGCTCCAGTGTAGGATATATTTTCTCTGAGAATTACAGTACTTGGCCTCAGGGCGGTACATACACAACACACACGACACATGTACACAGCAGATCTGACACTATGTTGTTTAAGATAGTCATAAGCTAAGATTCGAGGATGCAGATGGCTATTTTAGAAATAATAAATAATGATAATCACAGAATCACAGTATTAGTAATAAGAAAACAATGACAAAGTGTAACAAGAACTATTACCACCACCAACATAACTACCACTACACCATCACCACCATCATTTATTAGCAACATTTGTGCTATACATTCAAAGAGCTATTAATCTTTTTCTAGACTTGAGGGTCAAAATCCTTTATGAATATGTAGGTTCAGACAGGTAATATAAATGAGTGCTGCTGTCAGTGGCAAGATACCATAAGGAAGGGTAATGGCTGTGAAGAACTGGAAAGCAGTTTAGGGGCAACTTGCCTAGGGGCATTTGATCCCACTGTTGAACTTCTCTCTGGCTTAATTTTTTTTTTTTAAAGACAAGCCATGAATCTGATTGATGTTAATTTTCTTGATTTTCTTCAAGTGATTTTATTTTTTGAAACAGTGTATGGGCCACATGAAACATCATAAGGTCACATTTAGCCTATGGACTTTCACTTTCCAAACTTCCCACTAGGCCATCATACAAGATGTTTGTTCTTCAACCTGCAACATTTTTTTGCCTGTAATATCTGGCTAAAATCTGTCTGTTCTGTCTCAGTGTAATAGATACTTCGTCAGGGAGGGTTTATATGCCTGACTCCAAAGCAACCTTTCTCAAATTAGGCTAGGTATTTTCTATACTACCACATTCTTCCCCTGTAATGAGTGTTATTGATTGATAGGTGCAAATATCTTTCAATTGTTTTCCCCACTATGTGCTCCACAAAGAGAAGGATGATCTGCATAGCCTTGGCACTTGACGCAGTGTCTGGCACATAGCAGGCTTCAATAAATACTTGTTGAATAGATGAATTAGGCCTGTTATATACTTGGCACTTTTCATTTGTTAACTCAATTCTCAGATCAATCTGCTGAAAAAGGCACAAGGATTCTAATTGTATAGATAAGTTCAATGAGGCTCAGGGGAGTTAAATAACTGGCCCAAGGTTATTTATCTAATAAGCAATGAAGAATGACCTGGTTCTAAAGGCTAAGCTCTTACGCTGTATCTGGTTGCTTACACTTTTTAAATTGACACATTTCAAAGTGGCACTACTTACTCTAGCAGTTGAACACTAGTTAATATACACCAGTATTTACTCTAGCAGTTGAACACTAGTCGTTACAAATTTCAGCAAAATATATAGAATAAATATTTTGCCATTTGTAAATTTTAAAACAGCAAAAATTGCTTTAGGAAATAACTTTCAATCTTTGTTTCTGGGATAAGAAGAATAAATTCATTTCTCAAAAAATATGAGAGACTGAATTGAATAAAAATAGCACAAACTGAAATTTGGATTCAGAACAATGTTAAAATTTTGAAGATGAGCAGTTCAAAGCCAATAGAAAAGAAAAATTTAAACCCTGAGGCTTTACTTTAAAATATGTATAATTTATATGTAGTTCATGATTGGAGAAAAACAATAAGTAATGAATTTGTCAAATGCATGACAGGTTAAAATTTTCATGCAATGAAGGACTTTAACTTTTCAGATTCACAAACCTAGATTAGTTGACAAATTATGGGGAAATATGACCTTTGTAAATATCTGCCAGCCATGAATTATCACCTTGGTTTTTATACCTCAATCCTCACAACAACCCTGTGAGGTAGGCTTTCATTCAAGTTCTTCTAAAACAAAGAAAAATTGACATCAGTGTTAAGTGTTTTGATCAAAAACAGATAGTAACTATGACAATGTCAATGAATATTAGCTCAAAGATCACATCTGGTTTTCTTTTAAGCTCTTCTCTAATTTATATCTATTTTTATCTTTAAAAACCCCTCTAATCCAGATAAGCATCACTAGGTATGGTTAAGCAGCCTTTAAAAGCATATCTCTGTGATAATATCTGTAGTTATGATTAAAATTACCAGTAGCCCCATGTACTATAATAATATTAGTATAACCTGTTACGTTGTCTGGAACACAGAAATGTTGTCTATCCACCAAAAAAGGGAATCTCATTTTAACATCAGAGCTACATCAATGGTTAATGTTAAGCTTATTGACAGTCTCATAATTAAATACTTAGTGATTCCAGTATGTTTGATGCTTTGTCTCCTCCTGAGTAACTAGCATACATAATGTGCACTTCAGAACAGTTAAGAAATTCGTTTTGCAACTACTTTGAGTTTGACAGATGTGCAAATGACTTTCATTATCAAAGCAGCCAACAGCACAAACTTCTGCAGGTGGATGTATGGGTGGGCCATAAAGGGGGAAAGTGCTCCATCATTGTATGAAATGGCACAGTTGATTATCTCTGGCTTCATCAAACATAATTTAACAAGGATATTATGATTCATCACAATAAGTTAGGAGCACTGTTAGTGTACAGCTACTTGGTTTAGCAGATTTTAGGAAGCAAAATGTTTATAATATTTAAAATGTTGGCAGAATTGTGTTATAGTCATGGAGAATGGAGACTCTTATAAAGGTTTTGCTGTAAAGCTAGCTTGAATTTATCTAGTGATTTAAATGCTGTGGGATATGTGCCCCAAACATTCTTAATTTCAATCTTTAAACCTTGAAAGCTGGCGGATCAAATACTGGTCAAGCAAAGTCCAAGAATGCTTTGCTGTAATGTTCCTTTGATTTGGATGAAAAACTACTCTGGCATATAAGGTGATAAGCTGAAAAATGACTCAGGAAATAGAATGGACCATCTTCTCCATCCTTATCCAAATGAACATATCATGCTTGAGTTTCGGAAGAGTTACAGACTCTGGAAGAGAAAAGGAGCAATGTGATGCCTATATCTGTTCCTAGTTGACAAAGGTTTTTTTGGCTGTAGTTTTAGAAAACATTTGTCCTACTTAAGTTACAATAAACTCATTTTTTTCCTCTAAAAAGAATTTTTATTTCTTTGTTGCTGCAACACCATGGTTTTTCTACTTTTTTTTCTTTAACAAAAGCACAATGATTGCCTTAATGGCCGGACCAAAGATGTTCTGAAGCTATAACCCATCTTGGATTCCTAGAAATACGGAGAAAGATGTTATCACATGCAGACCTGAACTAATTTGCATCCTGTAAAGGCATTTTGAGTGTTCCATAAATACACCACTTGGCTCATTTTGTCAGACATGACAATGCTACATAAAGATAGTGATTTGTGAGTTACAACCACTATCTCTTC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4402:HG3_PB_pbsv_7058:HG4_PB_pbsv_7278:HG2_PB_pbsv_7278:HG4_Ill_SVrefine2DISCOVARDovetail_5401:HG2_PB_SVrefine2PB10Xhap12_5301:HG3_Ill_SVrefine2DISCOVARDovetail_5549:HG2_Ill_SVrefine2DISCOVARplusDovetail_11469:HG4_PB_SVrefine2PBcRDovetail_3585:HG3_Ill_Spiral_8025:HG2_PB_PB10Xdip_24612:HG2_Ill_Spiral_531:HG4_Ill_Spiral_612:HG2_Ill_breakscan11_3746:HG2_PB_SVrefine2PBcRplusDovetail_9744:HG2_10X_SVrefine210Xhap12_5208:HG2_PB_SVrefine2Falcon1plusDovetail_10467;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11469:HG3_Ill_SVrefine2DISCOVARDovetail_5549;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0490855;ClusterMaxSizeDiff=0.0488496;ClusterMaxEditDist=0.17267;PBcalls=9;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=4137;DistBack=-1;DistForward=37830;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:128326851-128326850;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9995;PctRecOverlap=0.9995;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:134:1/1:0:38:0:25:./.:0:0:0:0:1/1:0:57:1/1:0:322:.:4007:.
chr6	129521419	HG4_Ill_GATKHCSBGrefine_5165	G	GTATATATATACACGTGTACACATATACATGTGTATATATATACACGTGTACACATATACATGTGTATATATATATACACGTGTACACATATACATGTGTA	20	PASS	ClusterIDs=HG3_PB_HySA_11175:HG2_PB_SVrefine2Falcon1plusDovetail_10470:HG2_Ill_SVrefine2DISCOVARplusDovetail_11477:HG4_PB_pbsv_7282:HG4_Ill_GATKHC_12241:HG4_Ill_GATKHCSBGrefine_5165:HG2_Ill_GATKHC_12204:HG4_PB_HySA_10759;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_12204:HG4_Ill_GATKHCSBGrefine_5165:HG4_Ill_GATKHC_12241;NumExactMatchSVs=3;ClusterMaxShiftDist=0.136842;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.231579;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=100;DistBack=46;DistForward=27;DistMin=27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=11;REFWIDENED=6:129521418-129521431;PctSeqSimilarity=0.9836;PctSizeSimilarity=1;PctRecOverlap=0.7921;SizeDiff=0;StartDistance=21;EndDistance=21;GTMatch=0;TruScore=92;MatchId=4786.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:26:0|1:24:4:4:20:./.:0:0:0:0:0/1:23:23:./.:.:.:.:.:.
chr6	129706243	HG2_PB_SVrefine2PB10Xhap12_5306	G	GGAAGGAAGGGAGGGAGGGAGGAGAGGGAAGGAAGGGAGGGGAGGGAGGAAAAAGGAAGGAAGGAAGGAGGGTAAGGGAGGGAGGGGGAAGGAAGGGAGGAAAGGAGGAAGAGAAGGATGAAGGGAGGAAGGAAGGAAGGGGAAGGAAGGAGGAAGGGAGGGAGGGAAGGAGGGAAGAAGGGAGGAAGGGAAGGAGGGAAGGTGGAAGGAAGGAAGGAAAAGAAGGAAGGAAGGAGGGAGGGAAGCAGGAAGGAAGGAGGGAGAGGAAGGAACAGAAAGGAAAAAAAGGAGGGGAGGGAGGAAGGAAGGAACAAAGGAAGGAAGAAAGAAAGGAGGGAGGGAGGGAGGGAGGAAGGAGGAAAAGGAGGGAGGGAGGAAGGAAGGAACAAAGGAAGGAAGAAAGAAAGGAAGGAAGGAGGGAGGGAGGAAGGAAGGAACGAAGGAAGGAAGAAAGAAAGGAAGGAGGGAGGGAGGGAGGAAGGAACAAAGGAAGGAAGAAAGAAAGGAAGGAGGGAGGGAGGGAGGAAGGAGGAAAAGGAGGGAGGGAGGAAGGAAGGAACAAAGGAAGGAAGAAAGAAAGGAAGGAAGGAGGGAGGGAGGAAGGAAGGAAGGAACAAAGGAAGGAAGAAAGAAAGGAAGGAGGGAGGGAGGGAGGAAGGAGGAAAAGGAGGGAGGGAGGAAGGAAGGAACAAAGGAAGGAAGAAAGAAAGGAAGGAAGGAGGGAGGGAGGAAGGAAGGAACGAAGGAAGAAAGAAAGGAGGGAGGGAGGGAGGGAGGAAGGAACAAAGGAAGGAAGAAAGAAAGGAAGGAGGAGGGAGGGAGGAAGGAGGAAAAGGAGGGAGGGAGGAAGGAAGGAACAAAGGAAGGAAGAAAGAAAGGAAGGAAGGAGGGAGGGAGGAAGGAAGGAACGAAGGAAGGAAGAAAGAAAGGAAGGAGGGAGGGAGGGAGGAAGGAGGAAAAGGAGGGAGGGAGGAAGGAAGGAACAAAGGAAGAAAGAAAGGAGGGAGGGAGGGAGGAAGGAAGGAACAAAGGAAGGAAGAAAGGAAGGAAGGAGGGAGGGAGGGAGGAAGGAGGAAAAGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGAAAGGGCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10472:HG3_PB_pbsv_7065:HG2_PB_pbsv_7285:HG2_PB_HySA_13493:HG2_PB_HySA_13492:HG4_PB_HySA_10762:HG2_PB_SVrefine2PBcRplusDovetail_9748:HG2_PB_SVrefine2PB10Xhap12_5306:HG4_PB_pbsv_7285:HG4_PB_SVrefine2Falcon1Dovetail_4407:HG4_PB_SVrefine2PBcRDovetail_3590;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5306:HG2_PB_SVrefine2PBcRplusDovetail_9748;NumExactMatchSVs=2;ClusterMaxShiftDist=0.104292;ClusterMaxSizeDiff=0.104292;ClusterMaxEditDist=0.24541;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1117;DistBack=-270;DistForward=22;DistMin=-270;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=237;REFWIDENED=6:129706244-129706480;PctSeqSimilarity=0.9957;PctSizeSimilarity=0.9982;PctRecOverlap=0.957;SizeDiff=2;StartDistance=-47;EndDistance=-47;GTMatch=0;TruScore=98;MatchId=4787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:46:1/1:1:8:2:13:./.:0:0:0:0:./.:0:7:0/1:25:83:.:1010:.
chr6	129940596	HG2_PB_SVrefine2PBcRplusDovetail_9750	A	AAGGGGGAGGGGAGGGAGGGGGAGGGGAGGAGGGAGAGGGAAAAAGGAGAGGAAAAAGGGGAGAGAAAAAAGGGGAGGGGAAACGGGAGGGGAAATGGGAGGCAAAAGGGGAGGGGAAGGGGAGGGGAAAGGGGAGGGGAAAGGGAGGAGAAACGGGAATGGAAGGGGAGGAGAAAGGGGAGGGGAAGGGGAGGGGAAAGAGAAGGGGGAAAACAGAGGAAGAGGATGAAGGGGAAGGGGGAAAACAGAGGGAGAGGATGAAGGGGAAGGGGGAGGTTGGAGGGGAGGGGGAGGTTGGAGGGGAGGGGGACGTGGAGGGGATGGGGAGGTGGAGGGGATGGGGAGGTGGAGGGGAGGGGGAGGCGAAGGGGGATGGGGAAGGGGGATGGGGGTGGGAAGGGGAGGGGAGGGGATGGGGAGGGGGGAGGGGGAGGGGATGGGGGGAGGGGGAGGGGAGGGGAGGGAAGGGAAGGGGAGGGAAGGGGAGGGAAGGGGGAGGGGAAGGGGGATGGGGAAGGGGGAAGGGGGATGAGGAAGGGGAAGGGGATGGGGAAGGGGATAGGGAAGGGGGATGGGGAAGGGGGATAGGGAAGGGGATGGGGAAGGGGATGGGGAAGGGGGATGGGAAGGGGGATGGGGAAGGGGGAAGGGGATGGGGAAGGGGGATGGGGAAGGGGAAGGTCGATGGGGAAGGGGGATGGGAAGGGGGATGGGGAAGGGGGAAGGGGATGGGGAAGGGGGATGGGGAAGGGGGAAGGTCGATGGGGAAGGGGGATGGGAAGGGGAGGGAAGGGTGGAAGGGGGATGGGGAAGGGGGATGGGGAAGGGGGATGGGGAAGGGGGCAGGGGGATGGGGAAGGGGGATGGGGAAGGGGGATGGGGAAGAGGAGATGGGGAAGGGGGATGGGGAAGGGAGATGGGGAAGGGGAGGGGAGGGGAAGGGGAGGGGGAGGGGGAAGGGGGATGGGGAGGGGGGGGGAAGGGGGATGGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10474:HG2_PB_HySA_13495:HG2_PB_pbsv_7287:HG2_PB_SVrefine2PBcRplusDovetail_9750:HG2_PB_HySA_13494:HG3_PB_pbsv_7066:HG4_PB_SVrefine2Falcon1Dovetail_4410:HG4_PB_assemblyticsfalcon_23085:HG2_PB_SVrefine2PB10Xhap12_5309:HG4_PB_SVrefine2PBcRDovetail_3592;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9750;NumExactMatchSVs=1;ClusterMaxShiftDist=0.212361;ClusterMaxSizeDiff=0.212361;ClusterMaxEditDist=0.287375;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=991;DistBack=24;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=34;REFWIDENED=6:129940597-129940630;PctSeqSimilarity=0.9735;PctSizeSimilarity=0.9483;PctRecOverlap=0.9483;SizeDiff=-54;StartDistance=-17;EndDistance=-17;GTMatch=1;TruScore=95;MatchId=4788.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:2:28:1:18:./.:0:0:0:0:./.:0:1:0/1:18:30:.:933:.
chr6	130614783	HG3_Ill_GATKHCSBGrefine_5057	T	TAAAAACCAGTCCTGATTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAACAAAAAACAAAACAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3747:HG3_PB_pbsv_7069:HG2_PB_pbsv_7292:HG3_PB_HySA_11179:HG4_PB_SVrefine2Falcon1Dovetail_4413:HG4_PB_assemblyticsfalcon_23089:HG2_PB_SVrefine2Falcon1plusDovetail_10478:HG3_Ill_MetaSV_4648:HG3_Ill_GATKHCSBGrefine_5057:HG2_Ill_MetaSV_4471:HG2_Ill_GATKHCSBGrefine_5089:HG2_10X_SVrefine210Xhap12_5221;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5221:HG2_Ill_GATKHCSBGrefine_5089:HG2_Ill_MetaSV_4471:HG3_Ill_GATKHCSBGrefine_5057:HG3_Ill_MetaSV_4648;NumExactMatchSVs=5;ClusterMaxShiftDist=0.125874;ClusterMaxSizeDiff=0.125436;ClusterMaxEditDist=0.202532;PBcalls=6;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=298;DistBack=32245;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:130614784-130614798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:49:0|1:32:2:1:33:./.:0:0:0:0:0/1:34:9:./.:.:.:.:.:.
chr6	132037835	HG3_Ill_SVrefine2DISCOVARDovetail_5575	G	GTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAAGCTGAGGGGGGCAGATCACCTGAGGTCAGGAGTTCCAGACCAGCCTGACCAACATGGAGCAACTCCGTCTGTACTAAAAATACAGAATTAGCTTGGCGTGGTGGCACATGCGTGTAGTCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATTGCTTTCTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCTGTCTCAAAAACAAAAGAGGAGATGGAGTCTTGCTATGCTGTCCAGGCTGGTCTCCAGCTCCTAGGCTCAAGTGATCCACCCACCTTGGATTCCTAAAGTGCTGGGATTACAGGTGTGAGCCATCATTCCCAGCTGAGAATAAAAACACTTTTTAAAACCTATTGTTCGGGCTGGGCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5226:HG4_PB_HySA_10774:HG3_PB_pbsv_7073:HG2_PB_pbsv_7296:HG4_Ill_MetaSV_4664:HG4_PB_pbsv_7295:HG4_Ill_GATKHCSBGrefine_5176:HG3_Ill_manta_1743:HG3_Ill_MetaSV_4652:HG3_Ill_GATKHCSBGrefine_5061:HG2_Ill_MetaSV_4475:HG2_Ill_GATKHCSBGrefine_5095:HG3_PB_HySA_11187:HG4_PB_SVrefine2PBcRDovetail_3596:HG4_PB_SVrefine2Falcon1Dovetail_4417:HG4_Ill_SVrefine2DISCOVARDovetail_5412:HG3_PB_SVrefine2Falcon1Dovetail_4376:HG3_Ill_SVrefine2DISCOVARDovetail_5575:HG2_PB_SVrefine2PBcRplusDovetail_9754:HG2_PB_SVrefine2Falcon1plusDovetail_10481;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5226:HG4_PB_SVrefine2PBcRDovetail_3596:HG4_PB_SVrefine2Falcon1Dovetail_4417:HG4_Ill_SVrefine2DISCOVARDovetail_5412:HG3_PB_SVrefine2Falcon1Dovetail_4376:HG3_Ill_SVrefine2DISCOVARDovetail_5575:HG2_PB_SVrefine2PBcRplusDovetail_9754:HG2_PB_SVrefine2Falcon1plusDovetail_10481;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0604752;ClusterMaxSizeDiff=0.0604752;ClusterMaxEditDist=0.207487;PBcalls=10;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=448;DistBack=37648;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=284;REFWIDENED=6:132037836-132038119;PctSeqSimilarity=0.9978;PctSizeSimilarity=1;PctRecOverlap=0.9733;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=99;MatchId=4790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:0:42:1:16:./.:0:0:0:0:1/1:0:32:./.:4:47:.:.:.
chr6	132320430	HG2_Ill_GATKHCSBGrefine_5097	A	AAACTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3748:HG2_PB_pbsv_7298:HG4_PB_pbsv_7298:HG3_PB_HySA_11192:HG2_PB_HySA_13515:HG3_PB_pbsv_7074:HG4_Ill_MetaSV_4666:HG3_Ill_GATKHCSBGrefine_5062:HG2_Ill_GATKHCSBGrefine_5097:HG4_PB_SVrefine2Falcon1Dovetail_4418:HG3_PB_SVrefine2Falcon1Dovetail_4377:HG2_PB_SVrefine2Falcon1plusDovetail_10483;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5097:HG3_Ill_GATKHCSBGrefine_5062;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0762195;ClusterMaxSizeDiff=0.0426829;ClusterMaxEditDist=0.262687;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=8;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:132320431-132320446;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4791.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:42:0|1:38:2:1:36:./.:0:0:0:0:0/1:24:14:0/1:7:36:.:.:.
chr6	132526117	HG3_PB_SVrefine2Falcon1Dovetail_4378	T	TCAACTGTTTAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCGGCTAACTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3749:HG2_PB_pbsv_7300:HG3_PB_pbsv_7076:HG4_PB_pbsv_7300:HG4_PB_SVrefine2Falcon1Dovetail_4420:HG3_PB_SVrefine2Falcon1Dovetail_4378:HG2_PB_SVrefine2Falcon1plusDovetail_10485:HG3_PB_HySA_11195;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_4378:HG4_PB_SVrefine2Falcon1Dovetail_4420;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0721804;ClusterMaxSizeDiff=0.0691729;ClusterMaxEditDist=0.191458;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=23506;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=6:132526118-132526134;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4792.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:27:0|1:35:2:0:22:./.:0:0:0:0:0/1:24:6:0/1:5:24:.:.:.
chr6	132922314	HG2_PB_pbsv_7301	A	AGAGGGGAAGGAGGGAAAGAAGGAAGAGGAGGAAGGAAGGAGGGAGGGAAGCGAGCGGAAGAAGGGAAGGAGCGGAAGGAGGGAAAGAGGAACGGAACGGACGGAAATGGGAGGGAGAAGAAGGAAGGAGGGAAAGGAGGGAAAGACAGGAACGAAGGGAGGGAAGGAGGGAAGGAGGGAGAGGAGGGAAAGCGACAGGAAGGAAGGAGGCGAAGAGGGAAGGAGGAAAGAAGGAAGGAGGGAAGCGAGGGAAGGAGGGAAAGCAGGAAGGAAGGAGGGGAAGGAGGGAAAGGAAGGAAGGAGGGAGGGAAAGGAGGGAAAGAAGGAAGGAAGGAGGGAAGGAGGGAAAAGAAGGAAGCGAGGGAGGGAAGGAGGGAAAGAAAGGAAGGAAGGAGGGACGGACGAAAGGAGGAAAGAAGGAACAGAACGGAAGCGAGGGAAAGAAAGGAAGGAAGGACGGGGAAGGAGGGAAGGGGAAGGAGGGAAAGAAGGAAGGAGGGCAAGGAAGGGAGAGGAGGGAAGGAGGGAAAGAAAGGCAGCGAGGGAAAGGAGGGAGGAGGGAAAGAAGCGAAGGAAGGAAGGAGGGAAGGAGGGGAAGGAGGGAAGGAGGGAAGGGGGGAAGGTAGGGAAGAAGGCAGGGAGGGAGAGGAGGGAAAGAAAGGAAGGAAGGAGGAAGGAGGGAACAAGGAAAGAACAGGAAGGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10486:HG4_PB_HySA_10784:HG2_PB_pbsv_7301:HG2_PB_PB10Xdip_24689:HG4_PB_pbsv_7304:HG4_PB_SVrefine2Falcon1Dovetail_4423:HG2_PB_SVrefine2PBcRplusDovetail_9756:HG2_PB_SVrefine2PB10Xhap12_5317;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_7301;NumExactMatchSVs=1;ClusterMaxShiftDist=0.109281;ClusterMaxSizeDiff=0.107784;ClusterMaxEditDist=0.299094;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=703;DistBack=14;DistForward=21302;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:132922315-132922314;PctSeqSimilarity=0.9359;PctSizeSimilarity=0.9687;PctRecOverlap=0.761;SizeDiff=22;StartDistance=157;EndDistance=157;GTMatch=1;TruScore=88;MatchId=4793.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:65:1/1:1:11:2:9:./.:0:0:0:0:0/0:15:0:0/1:17:18:.:.:.
chr6	133160106	HG2_PB_SVrefine2PBcRplusDovetail_9757	A	ATCAATACAGTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_10788:HG3_PB_pbsv_7080:HG2_PB_pbsv_7303:HG4_PB_pbsv_7307:HG2_Ill_breakscan11_3750:HG2_PB_PB10Xdip_24690:HG4_PB_SVrefine2PBcRDovetail_3601:HG3_PB_SVrefine2Falcon1Dovetail_4381:HG4_PB_SVrefine2Falcon1Dovetail_4426:HG4_Ill_MetaSV_4669:HG4_Ill_GATKHCSBGrefine_5182:HG3_Ill_GATKHCSBGrefine_5064:HG2_PB_SVrefine2PBcRplusDovetail_9757:HG2_PB_SVrefine2PB10Xhap12_5318:HG2_Ill_MetaSV_4477:HG2_Ill_GATKHCSBGrefine_5102:HG2_10X_SVrefine210Xhap12_5230:HG2_PB_SVrefine2Falcon1plusDovetail_10487:HG2_PB_HySA_13528;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5230:HG2_Ill_GATKHCSBGrefine_5102:HG2_Ill_MetaSV_4477:HG2_PB_SVrefine2PB10Xhap12_5318:HG2_PB_SVrefine2PBcRplusDovetail_9757:HG3_Ill_GATKHCSBGrefine_5064:HG4_Ill_GATKHCSBGrefine_5182:HG4_Ill_MetaSV_4669;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0470219;ClusterMaxSizeDiff=0.0436137;ClusterMaxEditDist=0.199387;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=314;DistBack=2704;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=6:133160107-133160120;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4794.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:1:4:0:17:./.:0:0:0:0:1/1:0:19:1/1:1:48:.:.:.
chr6	134514908	HG2_PB_SVrefine2PB10Xhap12_5324	A	AAAGGAGAGGAGAGGGGAGGGGAGAAGGGAGGAGAGGGGAGGGGAGAAGGGAGGAGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGAGAAGGGAGGGGAGGGGAGGGGAGGGGAGGAGAAGGGAGGGGAGGGGAGGGGAGGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5324:HG2_PB_SVrefine2Falcon1plusDovetail_10493:HG4_PB_HySA_10797:HG4_PB_SVrefine2PBcRDovetail_3605:HG2_PB_PB10Xdip_24695:HG3_PB_HySA_11206:HG2_PB_HySA_13540:HG4_PB_SVrefine2Falcon1Dovetail_4432:HG2_PB_SVrefine2PBcRplusDovetail_9764:HG3_PB_SVrefine2Falcon1Dovetail_4388:HG3_PB_pbsv_7087;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5324:HG2_PB_SVrefine2PBcRplusDovetail_9764;NumExactMatchSVs=2;ClusterMaxShiftDist=0.168421;ClusterMaxSizeDiff=0.154386;ClusterMaxEditDist=0.241611;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=145;DistBack=1934;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=86;REFWIDENED=6:134514909-134514994;PctSeqSimilarity=0.9319;PctSizeSimilarity=0.9295;PctRecOverlap=0.6178;SizeDiff=-11;StartDistance=-54;EndDistance=-54;GTMatch=0;TruScore=82;MatchId=4795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:1:29:1:19:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr6	134725422	HG2_PB_SVrefine2PBcRplusDovetail_9766	A	ATATATATATATATATATATATATATATATATATATATACTCTCTATGTATATATATAAACTCTATCTCTTTCTCTCTCTGTATATATATAGAGAGTATATATATAGAGAGAATATATATAGGTATATATATATTCTATATATACCTATATATATAGAATAGATATATATAGATATGTCTAGTCTATATATATCTATATATAGAATATATATATAGAATATATATTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10494:HG3_PB_HySA_11208:HG4_PB_HySA_10801:HG4_PB_pbsv_7321:HG4_Ill_GATKHCSBGrefine_5190:HG2_PB_pbsv_7313:HG2_Ill_GATKHCSBGrefine_5110:HG2_PB_PB10Xdip_24696:HG2_PB_HySA_13543:HG3_PB_pbsv_7090:HG4_Ill_SVrefine2DISCOVARDovetail_5425:HG2_PB_SVrefine2PBcRplusDovetail_9766:HG2_PB_SVrefine2PB10Xhap12_5325:HG2_Ill_SVrefine2DISCOVARplusDovetail_11496:HG3_PB_SVrefine2Falcon1Dovetail_4390:HG4_PB_SVrefine2Falcon1Dovetail_4435:HG3_Ill_SVrefine2DISCOVARDovetail_5592;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11496:HG2_PB_SVrefine2PB10Xhap12_5325:HG2_PB_SVrefine2PBcRplusDovetail_9766:HG4_Ill_SVrefine2DISCOVARDovetail_5425;NumExactMatchSVs=4;ClusterMaxShiftDist=0.338205;ClusterMaxSizeDiff=0.338205;ClusterMaxEditDist=0.350515;PBcalls=12;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=226;DistBack=-375;DistForward=180;DistMin=-375;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=262;REFWIDENED=6:134725423-134725684;PctSeqSimilarity=0.9388;PctSizeSimilarity=0.9741;PctRecOverlap=0.1159;SizeDiff=-6;StartDistance=-203;EndDistance=-203;GTMatch=0;TruScore=67;MatchId=4796.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:15:42:./.:7:15:4:7:./.:0:0:0:0:0/1:3:17:./.:.:.:.:.:.
chr6	136367044	HG2_PB_pbsv_7318	T	TTTTGAGGCCGAGGCGGGCGATCACGAAAGGTCAGGAGATTCGAGACCATCCCGGCAAAACGGTGAACACCCGTCTCTATAAAAATCCCAAAATTAAGCCGGGCGTAGTGGCGGGCCGGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAGGCGTGAACCGGGAGGCGAGCTTTGCAGTGAGCCGAGATCCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA	10	PASS	ClusterIDs=HG2_PB_HySA_13554:HG2_PB_pbsv_7318:HG3_PB_HySA_11216:HG3_PB_pbsv_7095:HG2_PB_SVrefine2Falcon1plusDovetail_10497;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_7318;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0781528;ClusterMaxSizeDiff=0.0746004;ClusterMaxEditDist=0.200345;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=286;DistBack=1;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=6:136367040-136367047;PctSeqSimilarity=0.9519;PctSizeSimilarity=0.993;PctRecOverlap=0.9791;SizeDiff=2;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=97;MatchId=4798.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:53:./.:15:17:6:16:./.:0:0:0:0:0/1:25:12:./.:.:.:.:.:.
chr6	137254191	HG3_Ill_MetaSV_4658	T	TAAAATTTGCCTGATTTTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGTTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3611:HG3_PB_pbsv_7097:HG2_PB_pbsv_7320:HG4_PB_pbsv_7327:HG4_PB_HySA_10809:HG3_PB_HySA_11220:HG4_PB_SVrefine2Falcon1Dovetail_4440:HG2_PB_PB10Xdip_24702:HG2_PB_SVrefine2PB10Xhap12_5333:HG3_PB_SVrefine2Falcon1Dovetail_4394:HG4_Ill_MetaSV_4676:HG4_Ill_GATKHCSBGrefine_5198:HG3_Ill_SVrefine2DISCOVARDovetail_5605:HG3_Ill_MetaSV_4658:HG3_Ill_GATKHCSBGrefine_5077:HG2_Ill_MetaSV_4483:HG2_PB_SVrefine2Falcon1plusDovetail_10499;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_4483:HG3_Ill_GATKHCSBGrefine_5077:HG3_Ill_MetaSV_4658:HG3_Ill_SVrefine2DISCOVARDovetail_5605:HG4_Ill_GATKHCSBGrefine_5198:HG4_Ill_MetaSV_4676;NumExactMatchSVs=6;ClusterMaxShiftDist=0.225191;ClusterMaxSizeDiff=0.221374;ClusterMaxEditDist=0.316794;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=279;DistBack=82054;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:137254192-137254207;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9964;PctRecOverlap=0.9929;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4799.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:23:0|1:23:0:1:15:./.:0:0:0:0:./.:35:3:./.:.:.:.:.:.
chr6	137438363	HG2_PB_SVrefine2PBcRplusDovetail_9773	T	TTGTGTGTGGTGGGTATATGTGTATGGTGTGTATGTGGTGTGGTATGTGGTGTGTGTGTGGTGTATTGTGTGTGTTTGTGTGTGTGGTGTAGGGCATTGTGCATGGTGGGTGTATATGTATGGTGTGTGTAGTGTGGGGTGTGATATATGTGTTTGATGTATGTGTGTGTTATGTGTATAGTGTGGTGTATGTGTGTGGATGTGGTGCATATGTGGTGCGTGTGTGTAGTGTGTATGTAGTATGTTTTCTGTGTGTGGTGTGTGGATGTGGTGTGTGTGTAGTGCATTATGTGTGGTGGGTGTATATGTATGGTATATGTGATGTGTGTAGCATGATGTCTGTGTGTGTGTGTATGTGTGTAGTGCATTGTGTGTCGTGGGTATATATGTATGGTGTGTGTACTGGGGGTGTGATGTATGCATATGGTGCATATGAGGTATGTGTGTGGTGTGTGCATAGTGTGTTGATATATATGCTGTGTGTGTGTGGTGTGCATGTAGTGTGATGTGTGTGGTGTATGTGTGTGGATGTGTGTGTGTGGTGTGAGTGTAGTGTGTATGTAGTGTGCTTTCTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4442:HG3_PB_pbsv_7100:HG4_PB_pbsv_7330:HG4_PB_HySA_10818:HG4_PB_HySA_10817:HG2_PB_PB10Xdip_24704:HG2_Ill_breakscan11_3752:HG4_Ill_MetaSV_4679:HG3_Ill_MetaSV_4661:HG2_Ill_manta_2131:HG2_Ill_MetaSV_4486:HG2_Ill_GATKHCSBGrefine_5117:HG4_Ill_GATKHCSBGrefine_5201:HG3_Ill_GATKHCSBGrefine_5079:HG2_PB_pbsv_7323:HG3_PB_SVrefine2Falcon1Dovetail_4396:HG4_Ill_SVrefine2DISCOVARDovetail_5438:HG3_Ill_SVrefine2DISCOVARDovetail_5609:HG2_PB_SVrefine2PBcRplusDovetail_9773:HG2_PB_SVrefine2PB10Xhap12_5336:HG2_Ill_SVrefine2DISCOVARplusDovetail_11514:HG2_10X_SVrefine210Xhap12_5246:HG4_PB_SVrefine2PBcRDovetail_3613:HG2_PB_SVrefine2Falcon1plusDovetail_10502;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5246:HG2_Ill_SVrefine2DISCOVARplusDovetail_11514:HG2_PB_SVrefine2PB10Xhap12_5336:HG2_PB_SVrefine2PBcRplusDovetail_9773:HG3_Ill_SVrefine2DISCOVARDovetail_5609:HG4_Ill_SVrefine2DISCOVARDovetail_5438;NumExactMatchSVs=6;ClusterMaxShiftDist=0.112652;ClusterMaxSizeDiff=0.110919;ClusterMaxEditDist=0.204506;PBcalls=12;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=574;DistBack=43;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=92;REFWIDENED=6:137438364-137438455;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9948;PctRecOverlap=0.92;SizeDiff=3;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=96;MatchId=4800.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:108:1/1:1:35:0:42:./.:0:0:0:0:1/1:0:17:1/1:2:197:.:.:.
chr6	139096996	HG3_PB_pbsv_7104	G	GGCCTCTCCCTCTCCCGTCTCCCTCTCCCCTCTCACGTCTTCCCTCTTCCTCTCCTCCGTCTCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCGTCTCCCTCTCCCTCTCCCGCGTCTCCCTCTCCCTCTCCCGTCCTCGCTCTCACCTCTCATGCCGAGCAAAGCTGGAACGGTACTGCGCTGCCATCTCGGCTCCACTGCAACCTCCCTGCCTGATTCTGCCCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCCGCGCCCGCACGCCTGATGGTTTTCGTTTTTTTTGGTGAGATGGGGTTTCGCCTGTGTTTGGCCGGGCTGGTCCGCAGCTCCTAACCGCGAGTGATTCCGCCAAGCCTCGGCTCTCCGAATGGTGCCGGGATTGCAGATGAGTCTCGTTCACCATGCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTAAAACCCACTCCCAAGCCCGCGCTGCCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCAACCCTGTACGCACGAGTCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGGCCACCCATCGTCTGGGATATGAAGGAGCCCGCTCTGCCTGGCTGCCAGTGTGGAAAGTGAGGAGCGTCCTCCTGCCGGCCGCCATCACCATCTAAGGAAGCGAGAAGGCGGCCTCTTTCCCCGCCGCCATCCCATCTGGAAAAGTGAGGAGCGTCTTGCCCGGCCGCCCATCGTCTGAGAATGTGGGGAGCACCTCTGCCCCACCCGCCTGTCTGGGATGTGGAGGAGCGCCTCTGCTGGCCGCAACCCTGTCTGGGAGGTGAAGGAGTGTCTCTGCCCGGCCGTTCCGTCTGAAGAGTGAGGAAACCCCTGCCCTGGCAAACCGCCCCGTCTGAGAAGTGAGGAGCCCGCCTACCGTCTGGCAACCACCACCGTCTGGGAGTGAGGAGGCGTCTCCGCCCGGGCAGCCCCACCCCGTCCGAGGGAGGTGAGGGGGGTCAGCCCCCGCGCGCCGAGCCCGCCGCAACCGTCCGGGAGGTGAGGGGCCTCCTCTGCCGGCCGCCCCTACTGGGAAAGTGAGGAGCCCATCTGCCGGCCAGCCGCCCCGTCCCGGGAGGGAGCGGGGGGGGGGGGGTCGGCCAGCCGCCGCCGGCCGGGAGGTGAGGGGCTCCCTCTGCCGCGGTCCGGCCCTACTGGAAGTGGAGGAGCCCTCTGCGCCGGACAGTCGCCCCGTCCCAGGAGGGAGGTGGGGGTCAACACCCCCGCCCGGCCAAGCCGCCCAGTCCGGAGGGAAGGTGGGGGGTCAAGCCCCCCGCCTGGCCAAGCCGCCCCGTCCGGGAGGTGAGGGCGCCTTGCCCGGCCGCCCCTACTGGGAAGTGAGGAAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCAGGAGGGAGGTGGGGGGGTCCAGCCCCCCGCCTGGCGCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGGTTCAGCCCCCCCGCCCGGCCAGCCGCCCCCGTCCGGGAGGGGGGAGGGGGGTCAGACCCCTGCCCGGCAGCCGCCCCGTCCGGGAGGAGGTGGGGGGGTCAGCCCCCGCCCGCAGCCGCCCCGTCGGGAGGGAGGTGGGGGGATGAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTTGAGGGCGCCTCTGCCCCGGCCGCTCCTACTGGGAAAGTGAGGACCCCTCCTGCCGGCCAGCCGCGCCCGTCCGGGAGGGAGGTGGGGGGGGTTGCAGCCCCCCGCCCGCCAGCCGCCCGGTCGGAGGGAGGTGGGGGGATCAGCGCCACTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCGGCCGCCCCTACTGGAAGTGAGGACGTCCCTCTGCCCCGGCCAGCCGCCCCCGTCCGGGAGGGAAGGTGGGGGGAACCAGCCCCCCGCCCGGCCCAGCCGCCCCTTCGCAGGAGGTGAGGGGCCGCCTCTGCCCGCCGCCCCTACTGGGAAGTGCAGGGAGGCCGCTCTGGCCTGGCCAGCCGCCCGCCCGTCCGGGAGGGGTGGGGGGTCAGCCCCCCTCCCGGCCAGCGCCCATCTGGGAGGTGAGGGGCACTTCTGCCGGCCGCCCCTACTGGGAAGTGGAGGAGCCCCTCTGCCGCCGGCACGACCCGTCTGGGAGGTGTGCCCAGGGCTCATTGGGCGATGGGCCCATGATGACAATGGCGTTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAAATTGAGATGGATGGTTGCTGGGGTCTGTGGGTGGATAGAAGGTAGACATGGGAGACTTCTTCATTTTGTTCTGTACTAAGAAAAATTCTTTCTGCTTGGGATCCTGTTGATCTGTGACCTTATTCCCAACCTGTGCTCTCTGAAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTACAGATGCTTGAAAGGCAGCATGCTCGTAAGAGTCATCAACCACTCCCTAATCTTAAGTACCGCAGGGAACAGCAAACACTTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACGCAGAGACCTTTGTTCACTTGTTTTATACTGGCTGACCTCCCTGCCACTATTGTCCGCTAATGACCCTGCAAAATCCCCCTCTAGCGAGAAACACCAAGAATGATGCAATAAAAAAAAAAAATAAATAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATAAAGGAAAAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5337:HG2_PB_HySA_13574:HG3_PB_pbsv_7104:HG2_PB_PB10Xdip_24706:HG2_PB_SVrefine2Falcon1plusDovetail_10503:HG2_PB_pbsv_7327;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_7104;NumExactMatchSVs=1;ClusterMaxShiftDist=0.108361;ClusterMaxSizeDiff=0.105737;ClusterMaxEditDist=0.1682;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2807;DistBack=0;DistForward=48685;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:139096997-139096997;PctSeqSimilarity=0.9535;PctSizeSimilarity=0.9733;PctRecOverlap=0.9736;SizeDiff=75;StartDistance=17;EndDistance=17;GTMatch=0;TruScore=96;MatchId=4801.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:41:1|0:3:27:28:0:./.:0:0:0:0:0/1:43:7:0/1:104:57:.:2715:.
chr6	141335852	HG4_Ill_SVrefine2DISCOVARDovetail_5457	A	ATGCATTTACAAACCTTTAGCTAGACACAGAGCGCTGATTGATGCGTTTTTACAGATTTCTGATTGGTGCGTTTACAAACCTTTAGCTAGACACAGAGCACTGATTGATGCGTTTTTACAGATTTCTGATTGG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_5457:HG4_PB_pbsv_7344:HG4_PB_HySA_10846:HG2_PB_HySA_13610:HG4_PB_SVrefine2PBcRDovetail_3621:HG2_PB_pbsv_7337:HG4_PB_SVrefine2Falcon1Dovetail_4452;NumClusterSVs=7;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_5457:HG4_PB_SVrefine2PBcRDovetail_3621:HG4_PB_SVrefine2Falcon1Dovetail_4452;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0656934;ClusterMaxSizeDiff=0.0583942;ClusterMaxEditDist=0.315412;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=132;DistBack=9814;DistForward=47;DistMin=47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=180;REFWIDENED=6:141335853-141336032;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=0.8947;SizeDiff=0;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=96;MatchId=4802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:37:0|1:46:6:1:29:./.:0:0:0:0:0/1:23:12:./.:.:.:.:.:.
chr6	141693633	HG2_Ill_GATKHCSBGrefine_5130	A	ATGTATATATGTGTATATATGTATATATGTGTATATATGTATATATGTATAATGTATATATGTATATATGTATATATGTATATGTGTATATATATGTATATGTGTATATATGTATATGTGTATATATGTATATATGTGTATATATGTATATATGTGTATATGTGTATATATGTGTATATGTGTATATATGTGTGTATATATGTATATATGTGTATATATGTATATATATGTGTATATGTGTATATATGTATATGTGTATATGTGTATATGTGTATATGTGTATATATGTGTATATATGTATATATATGTGTATATATGTATATATATGTGTATATATGTGTATATATATGTGTATATATGTGTATATGTATGTGTATATATGTGTATATATATGTATATATGTGTATATGTGTGTATATATGTATATGTGTGTGTATATATGTATATGTGTGTATATATGTATATATATGTATATATGTATATG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4408:HG2_PB_PB10Xdip_24715:HG4_PB_pbsv_7348:HG4_Ill_GATKHC_12356:HG2_Ill_GATKHCSBGrefine_5130:HG3_Ill_GATKHCSBGrefine_5090:HG2_PB_HySA_13613:HG4_Ill_GATKHC_12355:HG2_PB_pbsv_7339:HG3_PB_pbsv_7114:HG2_PB_SVrefine2PB10Xhap12_5345:HG2_PB_SVrefine2PBcRplusDovetail_9783:HG2_Ill_SVrefine2DISCOVARplusDovetail_11532:HG3_Ill_SVrefine2DISCOVARDovetail_5626:HG2_10X_SVrefine210Xhap12_5260:HG2_PB_SVrefine2Falcon1plusDovetail_10514:HG4_PB_SVrefine2PBcRDovetail_3624:HG4_PB_SVrefine2Falcon1Dovetail_4455:HG4_Ill_SVrefine2DISCOVARDovetail_5460;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5130:HG4_Ill_GATKHC_12356;NumExactMatchSVs=2;ClusterMaxShiftDist=0.27451;ClusterMaxSizeDiff=0.27451;ClusterMaxEditDist=0.324045;PBcalls=11;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=483;DistBack=25;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=388;REFWIDENED=6:141693540-141693927;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4803.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:86:1/1:1:21:1:23:./.:0:0:0:0:1/1:0:52:1/1:8:159:.:.:.
chr6	141770869	HG4_Ill_GATKHCSBGrefine_5219	T	TTTCTTTGCTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3754:HG3_PB_assemblyticsfalcon_23630:HG4_PB_pbsv_7349:HG4_PB_HySA_10854:HG3_PB_SVrefine2Falcon1Dovetail_4409:HG2_PB_assemblyticsPBcR_23026:HG2_PB_SVrefine2PB10Xhap12_5346:HG2_PB_SVrefine2Falcon1plusDovetail_10515:HG2_PB_SVrefine2PBcRplusDovetail_9784:HG4_Ill_MetaSV_4685:HG4_Ill_GATKHCSBGrefine_5219:HG2_Ill_MetaSV_4492:HG2_PB_HySA_13615:HG2_PB_pbsv_7340:HG4_PB_SVrefine2Falcon1Dovetail_4456:HG2_PB_PB10Xdip_24717;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_4492:HG4_Ill_GATKHCSBGrefine_5219:HG4_Ill_MetaSV_4685;NumExactMatchSVs=3;ClusterMaxShiftDist=0.228385;ClusterMaxSizeDiff=0.228385;ClusterMaxEditDist=0.261011;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=8386;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=34;REFWIDENED=6:141770870-141770903;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4804.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:51:1|0:0:36:35:2:./.:0:0:0:0:0/1:44:15:0/1:7:39:.:.:.
chr6	142543799	HG4_Ill_MetaSV_4686	T	TATCTGCACTGCTTCCTCTCTTCACCCATTTCTATTTTTTTTTTCTTTAACTTGACTCATTTTGGAGCATTTGGATCAGATGTTCTAGTTTGGCCCATAAACAAAGCTCCATCAGTAGAAAAGTTAAGACATCC	20	PASS	ClusterIDs=HG2_PB_pbsv_7344:HG2_Ill_breakscan11_3755:HG3_PB_pbsv_7118:HG4_PB_pbsv_7353:HG4_PB_assemblyticsfalcon_23185:HG4_PB_SVrefine2Falcon1Dovetail_4459:HG4_Ill_manta_1850:HG4_Ill_MetaSV_4686:HG4_Ill_GATKHCSBGrefine_5222:HG4_Ill_Cortex_3273:HG3_PB_assemblyticsfalcon_23635:HG3_Ill_manta_1758:HG3_Ill_Spiral_8121:HG3_Ill_MetaSV_4669:HG3_Ill_GATKHCSBGrefine_5092:HG3_Ill_Cortex_3296:HG3_Ill_250bpfermikitraw_10043:HG3_Ill_150bpfermikitraw_9785:HG2_PB_SVrefine2PBcRplusDovetail_9787:HG2_Ill_manta_2139:HG2_Ill_SpiralSDKrefine_15186:HG2_Ill_MetaSV_4493:HG2_Ill_GATKHCSBGrefine_5132:HG2_Ill_Cortex_7999:HG2_Ill_150bpfermikitraw_9744:HG2_10X_SVrefine210Xhap12_5265:HG2_PB_SVrefine2Falcon1plusDovetail_10518:HG4_Ill_SVrefine2DISCOVARDovetail_5463:HG3_PB_SVrefine2Falcon1Dovetail_4413:HG3_Ill_SVrefine2DISCOVARDovetail_5632:HG2_Ill_SVrefine2DISCOVARplusDovetail_11536;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5265:HG2_Ill_150bpfermikitraw_9744:HG2_Ill_Cortex_7999:HG2_Ill_GATKHCSBGrefine_5132:HG2_Ill_MetaSV_4493:HG2_Ill_SpiralSDKrefine_15186:HG2_Ill_manta_2139:HG2_PB_SVrefine2PBcRplusDovetail_9787:HG3_Ill_150bpfermikitraw_9785:HG3_Ill_250bpfermikitraw_10043:HG3_Ill_Cortex_3296:HG3_Ill_GATKHCSBGrefine_5092:HG3_Ill_MetaSV_4669:HG3_Ill_Spiral_8121:HG3_Ill_manta_1758:HG3_PB_assemblyticsfalcon_23635:HG4_Ill_Cortex_3273:HG4_Ill_GATKHCSBGrefine_5222:HG4_Ill_MetaSV_4686:HG4_Ill_manta_1850:HG4_PB_SVrefine2Falcon1Dovetail_4459:HG4_PB_assemblyticsfalcon_23185;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0518519;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.224638;PBcalls=9;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=133;DistBack=0;DistForward=17110;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:142543800-142543799;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4805.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:1:18:0:7:./.:0:0:0:0:1/1:0:25:./.:.:.:.:.:.
chr6	143183501	HG2_PB_SVrefine2PBcRplusDovetail_9789	G	GTAATACATATAATCTATTACATGTATTACATATTTTATAATACATATAATCGATTACATGTATCATATATTTTATAATACATATAATCGATTATGTGTATCATATATTTTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9789:HG3_PB_assemblyticsfalcon_23638:HG4_PB_pbsv_7356:HG3_PB_SVrefine2Falcon1Dovetail_4414:HG2_PB_SVrefine2Falcon1plusDovetail_10519:HG2_PB_HySA_13623:HG2_PB_pbsv_7347:HG3_PB_pbsv_7121:HG4_PB_SVrefine2PBcRDovetail_3626:HG4_PB_SVrefine2Falcon1Dovetail_4460;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9789:HG4_PB_SVrefine2Falcon1Dovetail_4460;NumExactMatchSVs=2;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.0986547;ClusterMaxEditDist=0.210526;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=111;DistBack=5952;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=240;REFWIDENED=6:143183502-143183741;PctSeqSimilarity=0.9794;PctSizeSimilarity=1;PctRecOverlap=0.4775;SizeDiff=0;StartDistance=-58;EndDistance=-58;GTMatch=0;TruScore=81;MatchId=4806.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:63:1/1:4:29:0:14:./.:0:0:0:0:0/1:30:22:./.:.:.:.:.:.
chr6	143693462	HG2_PB_SVrefine2PBcRplusDovetail_9790	C	CTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACCCATCCGTCCGTCCATCCATCCAATCCATTCATCTATCCATCCATCCATCCAACCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5266:HG3_PB_HySA_11281:HG2_PB_pbsv_7348:HG2_PB_PB10Xdip_24728:HG4_PB_pbsv_7358:HG2_PB_HySA_13625:HG4_PB_SVrefine2Falcon1Dovetail_4461:HG4_Ill_SVrefine2DISCOVARDovetail_5465:HG4_Ill_GATKHCSBGrefine_5226:HG3_PB_SVrefine2Falcon1Dovetail_4416:HG3_Ill_SVrefine2DISCOVARDovetail_5635:HG2_PB_SVrefine2PBcRplusDovetail_9790:HG2_PB_SVrefine2PB10Xhap12_5349:HG2_PB_SVrefine2Falcon1plusDovetail_10520:HG2_Ill_SVrefine2DISCOVARplusDovetail_11538:HG2_Ill_250bpfermikitraw_10344;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5266:HG4_PB_SVrefine2Falcon1Dovetail_4461:HG4_Ill_SVrefine2DISCOVARDovetail_5465:HG4_Ill_GATKHCSBGrefine_5226:HG3_PB_SVrefine2Falcon1Dovetail_4416:HG3_Ill_SVrefine2DISCOVARDovetail_5635:HG2_PB_SVrefine2PBcRplusDovetail_9790:HG2_PB_SVrefine2PB10Xhap12_5349:HG2_PB_SVrefine2Falcon1plusDovetail_10520:HG2_Ill_SVrefine2DISCOVARplusDovetail_11538:HG2_Ill_250bpfermikitraw_10344;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0904523;ClusterMaxSizeDiff=0.0703518;ClusterMaxEditDist=0.262626;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=97;DistBack=-93;DistForward=25;DistMin=-93;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=109;REFWIDENED=6:143693464-143693572;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:65:1/1:0:19:4:28:./.:0:0:0:0:./.:3:34:./.:.:.:.:.:.
chr6	143951364	HG2_Ill_GATKHCSBGrefine_5134	T	TAAAATATTTTCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAGAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4670:HG2_Ill_MetaSV_4494:HG3_PB_assemblyticsfalcon_23644:HG4_PB_assemblyticsfalcon_23191:HG2_PB_assemblyticsfalcon_23794:HG4_PB_HySA_10868:HG2_PB_HySA_13627:HG3_PB_HySA_11284:HG4_PB_SVrefine2PBcRDovetail_3627:HG2_10X_SVrefine210Xhap12_5268:HG4_Ill_MetaSV_4688:HG4_Ill_GATKHCSBGrefine_5227:HG3_Ill_GATKHCSBGrefine_5095:HG2_PB_SVrefine2PBcRplusDovetail_9791:HG2_PB_SVrefine2PB10Xhap12_5350:HG2_Ill_GATKHCSBGrefine_5134:HG3_PB_SVrefine2Falcon1Dovetail_4417:HG4_PB_SVrefine2Falcon1Dovetail_4462:HG2_PB_pbsv_7349:HG2_PB_PB10Xdip_24729:HG2_PB_SVrefine2Falcon1plusDovetail_10521:HG2_Ill_breakscan11_3756:HG4_PB_pbsv_7360:HG3_PB_pbsv_7123;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5134:HG2_PB_SVrefine2PB10Xhap12_5350:HG2_PB_SVrefine2PBcRplusDovetail_9791:HG3_Ill_GATKHCSBGrefine_5095:HG4_Ill_GATKHCSBGrefine_5227:HG4_Ill_MetaSV_4688;NumExactMatchSVs=6;ClusterMaxShiftDist=0.130233;ClusterMaxSizeDiff=0.130233;ClusterMaxEditDist=0.172466;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=317;DistBack=1272;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=6:143951365-143951375;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4808.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:82:1/1:0:28:2:21:./.:0:0:0:0:1/1:0:18:1/1:1:43:.:.:.
chr6	145015388	HG3_PB_assemblyticsfalcon_23650	GGATTAGCTTTT	TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAAGGACATATCATATTTATTCATACACATGCTGGAATTATTGGTGCAGACATTTAAATACATTTTCTTTGAGAAAGTCCTTTTTTTTTTTTTTTTTTTTTTTGATGGAGTTTCCCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCAATCTCAGCTCACAACAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCACAGCCTCCAAGTAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAATTTTTTTATTTTTAGTAGAGACGGGGTTTCTCCGTGTTGGTCAGGCTGGTCTTGAACTCCTGATCTCAGGTGATCTGCCCGCCTTGGCCTGCCACAGTGCTGGGATTACAGTCGTGAGCCACCACAGCTGGCCTGGGAAAGTCCATTTTTTTTTTTTTTTTTTTAAATTTATTTTTTTTTTTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGACGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCCGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCTGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGCACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGCGGCTGGCCGGCGGGGGGCTGACCCCCCACCTCCCTCGGACGGGGCGGCTGGCCGGGGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGACAGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCTACCTCCCTACCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGCTGACCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCAGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGCTCCTTGCCCTCGGGCCCCGCGGGGCCCGTCCGCTCCTCCAGCCGCTGCCTCCCGGGCGGCGCTCGCCGGCGCGGCGGCAAAGACTGAGACAGCTCCGCTGCCCGCTGAACTCCATCCTCCTGGCGGTCGGGCGCGCGGCGGCTGCGGTCGGTCGCTCGCGGCAGCGGCTCCGCTTCATATCTGCAGCTGGGGCCCGCGGGCGTCAGCGCCGCGACTGTCCTGGCTCCGCACTGCCCCGGGCCGCAGCGCAGCCGCGCCAACCACCAGCCGCGGCCACCATGGCCAGACGGGCTCCCTAAGCCACCGACCCCAGCCCGCGGCGCCTTCGACCCTTCTGGGGCCTCCGGCGCCGCGACCTCCTCTGCCTGAAATTTCTTTTTTCTTTTCCTTTTATTTTATTTTATTTTTTGAGACGGAGTCTTGCTCTGTTGTCTGGGTGGAGTGCAGTGGTGCAATCTCGGCCTCACTGC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_24731:HG2_PB_assemblyticsfalcon_23799:HG3_PB_pbsv_7127:HG3_PB_assemblyticsfalcon_23650:HG4_PB_assemblyticsfalcon_23197:HG3_PB_HySA_11288:HG3_PB_SVrefine2Falcon1Dovetail_4419:HG4_PB_SVrefine2Falcon1Dovetail_4464;NumClusterSVs=8;ExactMatchIDs=HG3_PB_assemblyticsfalcon_23650;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0985933;ClusterMaxSizeDiff=0.0985933;ClusterMaxEditDist=0.16335;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=3814;DistBack=4156;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:145015400-145015387;PctSeqSimilarity=0.9876;PctSizeSimilarity=0.9825;PctRecOverlap=0.9853;SizeDiff=-68;StartDistance=1;EndDistance=12;GTMatch=0;TruScore=98;MatchId=4809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:35:./.:10:10:17:13:./.:0:0:0:0:0/1:36:17:0/1:154:235:.:3961:.
chr6	145500941	HG2_PB_pbsv_7355	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATAACTCTAAGTTTAGGGTACATGTGCCACATTGTGCCAGGTTAGTTACATATGTATAACATGTGCCATGCTGGTGCGCTGCACCCACCTATGTTCATCTGCATTAGGTATTCTCCCAATGCATCCGCTCCCTCGCCCCGACCACCAAACACAGTCCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCACCTATGAAGTAGAAATAATGCGGTGTTTGGTTTTTTGTTCTTGCGCATAGTTTACTGGAATGATGGTTTCCAAATTTCATCCATGCGTCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGATAGTAATTCCAATGGTGGTATAATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCCTATTGTAATAGTGCCGCAAATAAACATACGTGTGCATGTGGGTCCTTTATAAGCAGCATGATTTATAGTCTTTGGGTAATATACCCAGTAATGGGGATGGCTGGGGTCAAATGGTATTCTAGTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGTTGAACTAAGTTTACAGTCCCACAACAGGTAAAAAGTGGTTCCTATTTCTCCGCATCCTCATTCCAGCACTGTTGTTTCGATTTTTAATGATTGCCATCTAACTGTTGAGATGGATATCTCCATAGTGGTTTTGATTTGGCATTTCTCGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAATGTTCTTCCTTTTGAGAAGTGTCTGTTCATGTCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCGCCTTTGTCAGATGAGTAGGTTCGAAAATTTTCCCCATGTTGTAGGTTGCCTGTTTCATCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTGTTGCATTGCTTTTGTGTTTGGGACAATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGAATGCCTAGGTTTTCTTCTTAGGGTTTTTATGGTTTTAGTTTAACGTTTTAAATCTTTATCCATCTGGAATTGAATTTTTTGTATAAGGTGTGAAGGAAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCATTTTCCCAGCACCATTTAATTAATATGGGGAATCCTTTCCCCATTGCTTTTTTTCTCAGGTTTGTCAAAGAATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTCTGTTCATGTCTATATCTCTGTTTTGGTACCAGTACCTATGCTGTTTTGGTTACTGTAGTTTGTAGTATAGTTTTGAAAAGTCAGGTAGTGTGATGCCTCCACTTTGTTCTTTTGGCTTAGGAATTGGACTTGGCAATGGCGGGCCTCTTTTTTTGGTTAACATAATGAACTTTAAGTAGTTTTTTTCCATTCTGTGAAGAACATCATTGGTAAGCTTGATGGGGCAAGGTAATTTACAGATTCAACATTCTT	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_24736:HG2_PB_pbsv_7355:HG4_PB_HySA_10872:HG4_PB_pbsv_7365:HG2_PB_HySA_13637:HG3_PB_assemblyticsfalcon_23652:HG4_PB_assemblyticsfalcon_23200:HG2_PB_HySA_13636:HG3_PB_SVrefine2Falcon1Dovetail_4421:HG4_PB_SVrefine2Falcon1Dovetail_4467:HG2_PB_SVrefine2Falcon1plusDovetail_10524:HG2_PB_SVrefine2PB10Xhap12_5354:HG4_PB_SVrefine2PBcRDovetail_3630;NumClusterSVs=13;ExactMatchIDs=HG2_PB_pbsv_7355;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0477667;ClusterMaxSizeDiff=0.0471464;ClusterMaxEditDist=0.196841;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=1641;DistBack=0;DistForward=49457;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:145500942-145500941;PctSeqSimilarity=0.9522;PctSizeSimilarity=0.9714;PctRecOverlap=0.972;SizeDiff=47;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=96;MatchId=4810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:53:0|1:36:3:0:31:./.:0:0:0:0:0/1:26:13:0/1:53:41:.:1512:.
chr6	148195811	HG2_PB_PB10Xdip_24739	GAGGA	AGAATTTAAAAAAAAACATTTGAAATAAACAAAAAAAAAAATTAACATAAGAAATTTGAAAAAAAAAAAAAAAAAGAAAAAAATTGATGAACATATAAAAAAAAAATACTAAACGAATAGCAGACATCAAAAAGCTATAATGATCAAGTGGCTTATCCTGGATGCAAGCTGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGATGAAATGTCATCCAGAAAAGTATCTCACTCTGTGAATGCATGGATATCAC	20	PASS	ClusterIDs=HG2_PB_HySA_13649:HG2_PB_SVrefine2PB10Xhap12_5357:HG2_PB_PB10Xdip_24739:HG4_PB_HySA_10884:HG3_PB_pbsv_7132:HG4_PB_pbsv_7370:HG2_PB_pbsv_7358:HG4_PB_assemblyticsfalcon_23208:HG3_PB_assemblyticsfalcon_23663:HG2_PB_assemblyticsfalcon_23811:HG3_PB_HySA_11298:HG4_PB_SVrefine2Falcon1Dovetail_4470:HG3_PB_SVrefine2Falcon1Dovetail_4425:HG2_PB_SVrefine2PBcRplusDovetail_9795:HG3_PB_SVrefine2PBcRDovetail_3336:HG2_PB_SVrefine2Falcon1plusDovetail_10526:HG2_Ill_breakscan11_3757;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_24739:HG2_PB_SVrefine2PB10Xhap12_5357;NumExactMatchSVs=2;ClusterMaxShiftDist=0.199679;ClusterMaxSizeDiff=0.199679;ClusterMaxEditDist=0.253007;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=2242;DistBack=21;DistForward=3260;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:148195816-148195810;PctSeqSimilarity=0.9181;PctSizeSimilarity=0.847;PctRecOverlap=0.8489;SizeDiff=-405;StartDistance=23;EndDistance=27;GTMatch=0;TruScore=87;MatchId=4811.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:60:33:./.:33:8:19:16:./.:0:0:0:0:0/0:34:0:0/1:71:287:.:2734:.
chr6	148499801	HG2_Ill_SVrefine2DISCOVARplusDovetail_11555	A	ACCTCCCAGATGGGGTGGTGGCCGGGCAGAGGGGCTCCTCATTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACCGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11555:HG3_PB_pbsv_7133:HG2_PB_pbsv_7360:HG3_PB_SVrefine2PBcRDovetail_3337;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11555:HG3_PB_SVrefine2PBcRDovetail_3337;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0538462;ClusterMaxSizeDiff=0.0461538;ClusterMaxEditDist=0.19697;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=126;DistBack=36705;DistForward=76;DistMin=76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=449;REFWIDENED=6:148499802-148500250;PctSeqSimilarity=0.9792;PctSizeSimilarity=0.9921;PctRecOverlap=0.6772;SizeDiff=-1;StartDistance=-41;EndDistance=-41;GTMatch=0;TruScore=88;MatchId=4813.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:40:./.:19:13:2:17:./.:0:0:0:0:0/1:25:12:./.:.:.:.:.:.
chr6	148802151	HG3_Ill_GATKHCSBGrefine_5100	T	TAAAAATGTTCTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3759:HG3_PB_pbsv_7137:HG2_PB_assemblyticsfalcon_23817:HG3_PB_HySA_11307:HG3_Ill_MetaSV_4673:HG2_PB_pbsv_7362:HG2_Ill_MetaSV_4499:HG4_PB_assemblyticsfalcon_23213:HG3_PB_assemblyticsfalcon_23667:HG3_PB_SVrefine2Falcon1Dovetail_4426:HG3_Ill_GATKHCSBGrefine_5100:HG2_PB_SVrefine2Falcon1plusDovetail_10527:HG2_Ill_GATKHCSBGrefine_5140;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5140:HG2_PB_SVrefine2Falcon1plusDovetail_10527:HG3_Ill_GATKHCSBGrefine_5100:HG3_PB_SVrefine2Falcon1Dovetail_4426;NumExactMatchSVs=4;ClusterMaxShiftDist=0.181159;ClusterMaxSizeDiff=0.181159;ClusterMaxEditDist=0.228261;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=286;DistBack=20270;DistForward=5920;DistMin=5920;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=6:148802152-148802170;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4814.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:37:0|1:34:0:0:30:./.:0:0:0:0:0/1:28:13:./.:.:.:.:.:.
chr6	149355653	HG2_Ill_GATKHC_12357	G	GCCTGCCCTCCCTTCCCCCAGAGGCCCTCTCCTCTTTCCACCAACAGCTCTTTAAGCTCCATCCCAA	20	PASS	ClusterIDs=HG2_PB_HySA_13666:HG4_PB_pbsv_7374:HG3_PB_pbsv_7140:HG4_PB_HySA_10899:HG2_PB_pbsv_7365:HG3_PB_assemblyticsfalcon_23674:HG4_PB_assemblyticsfalcon_23220:HG4_Ill_manta_1856:HG4_Ill_GATKHC_12412:HG4_Ill_GATKHCSBGrefine_5236:HG4_Ill_250bpfermikitraw_10388:HG4_Ill_150bpfermikitraw_9970:HG3_Ill_GATKHC_12338:HG3_Ill_GATKHCSBGrefine_5101:HG2_PB_assemblyticsfalcon_23822:HG2_PB_assemblyticsPBcR_23069:HG2_Ill_GATKHC_12357:HG2_Ill_GATKHCSBGrefine_5143:HG2_PB_PB10Xdip_24746;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5143:HG2_Ill_GATKHC_12357:HG2_PB_assemblyticsPBcR_23069:HG2_PB_assemblyticsfalcon_23822:HG3_Ill_GATKHCSBGrefine_5101:HG3_Ill_GATKHC_12338:HG4_Ill_150bpfermikitraw_9970:HG4_Ill_250bpfermikitraw_10388:HG4_Ill_GATKHCSBGrefine_5236:HG4_Ill_GATKHC_12412:HG4_Ill_manta_1856:HG4_PB_assemblyticsfalcon_23220;NumExactMatchSVs=12;ClusterMaxShiftDist=0.103704;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.270677;PBcalls=10;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=24497;DistForward=8487;DistMin=8487;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=185;REFWIDENED=6:149355512-149355696;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4815.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:49:1/1:2:19:1:16:./.:0:0:0:0:./.:2:18:./.:.:.:.:.:.
chr6	150124614	HG2_Ill_GATKHCSBGrefine_5156	C	CATAATCTGAATATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGA	20	PASS	ClusterIDs=HG2_PB_pbsv_7370:HG2_PB_assemblyticsfalcon_23829:HG4_PB_SVrefine2PBcRDovetail_3639:HG4_Ill_MetaSV_4695:HG4_Ill_GATKHCSBGrefine_5243:HG2_Ill_GATKHCSBGrefine_5156:HG4_PB_HySA_10905;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5156:HG4_Ill_GATKHCSBGrefine_5243:HG4_Ill_MetaSV_4695;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0633914;ClusterMaxSizeDiff=0.0602219;ClusterMaxEditDist=0.102167;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=305;DistBack=16896;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=6:150124615-150124634;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4817.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:43:20:./.:0:0:0:0:./.:0:0:0:0:0/1:26:7:./.:4:36:.:.:.
chr6	150489125	HG2_Ill_GATKHCSBGrefine_5158	T	TCTTTCTCTCCTCCCCTTTCTCTCCTCCCCCTTTCTCCCCTTCTCTCCTCCCCTTTCTCCCCTTCTCTCCTCCCCTTTCTCCCCTTCTCTCCTCCCCTTTCTCCCCTTCTCTCCTCCC	20	PASS	ClusterIDs=HG3_PB_pbsv_7147:HG2_PB_SVrefine2PBcRplusDovetail_9804:HG2_PB_assemblyticsfalcon_23834:HG2_PB_SVrefine2PB10Xhap12_5367:HG4_PB_SVrefine2PBcRDovetail_3642:HG2_PB_SVrefine2Falcon1plusDovetail_10536:HG2_Ill_SVrefine2DISCOVARplusDovetail_11563:HG2_Ill_GATKHCSBGrefine_5158:HG2_Ill_150bpfermikitraw_9787:HG2_PB_assemblyticsPBcR_23079:HG2_PB_PB10Xdip_24749:HG3_PB_SVrefine2PBcRDovetail_3345:HG2_PB_HySA_13680:HG3_PB_assemblyticsfalcon_23687:HG3_PB_SVrefine2Falcon1Dovetail_4436:HG4_PB_pbsv_7381:HG2_PB_pbsv_7373;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9787:HG2_Ill_GATKHCSBGrefine_5158:HG2_Ill_SVrefine2DISCOVARplusDovetail_11563:HG2_PB_SVrefine2Falcon1plusDovetail_10536:HG2_PB_SVrefine2PB10Xhap12_5367:HG2_PB_SVrefine2PBcRplusDovetail_9804;NumExactMatchSVs=6;ClusterMaxShiftDist=0.176;ClusterMaxSizeDiff=0.176;ClusterMaxEditDist=0.27451;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=117;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=103;REFWIDENED=6:150489058-150489160;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4818.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:0:7:1:5:./.:0:0:0:0:./.:1:12:./.:.:.:.:.:.
chr6	150519291	HG4_PB_SVrefine2Falcon1Dovetail_4478	TT	GTCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCGCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGGCCTGGATGCCCGGCTTTGTGTGCGCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGCCCGTCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCGCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCTGGCTTTGTGTTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCGCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCAGCTTTGTGTGCCCCTGCCCGTCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCAGCTTTTGTGTGCCCCTGCCCTTCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGCCGCCACAGTGGAGGAGGGCCTGGATGCCCAGCTTTGTGTGCCCCTGCCTGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGCCCGTCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGCCCTTCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGGCCGCCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGCCCGTCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGCCCTTCACGGTGGAGGAGGGCCTGGATGCCCGGCTTTGTGTGCCCCTGCCGC	10	PASS	ClusterIDs=HG4_PB_HySA_10912:HG2_PB_pbsv_7374:HG4_PB_pbsv_7382:HG3_PB_assemblyticsfalcon_23689:HG3_PB_SVrefine2Falcon1Dovetail_4438:HG4_PB_assemblyticsfalcon_23232:HG4_PB_SVrefine2Falcon1Dovetail_4478:HG2_PB_SVrefine2PB10Xhap12_5368;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_4478:HG4_PB_assemblyticsfalcon_23232;NumExactMatchSVs=2;ClusterMaxShiftDist=0.222894;ClusterMaxSizeDiff=0.220302;ClusterMaxEditDist=0.263249;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1250;DistBack=195;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=730;REFWIDENED=6:150518798-150519527;PctSeqSimilarity=0.9763;PctSizeSimilarity=0.96;PctRecOverlap=0.6949;SizeDiff=50;StartDistance=356;EndDistance=357;GTMatch=0;TruScore=87;MatchId=4819.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:50:./.:24:11:14:16:./.:0:0:0:0:./.:6:2:0/1:35:26:.:1359:.
chr6	150910863	HG2_Ill_MetaSV_4505	G	GTTTTGTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATT	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4678:HG2_PB_HySA_13688:HG2_PB_pbsv_7378:HG4_PB_assemblyticsfalcon_23238:HG4_PB_SVrefine2PBcRDovetail_3645:HG4_Ill_SVrefine2DISCOVARDovetail_5497:HG4_Ill_MetaSV_4701:HG4_Ill_GATKHCSBGrefine_5248:HG2_Ill_SVrefine2DISCOVARplusDovetail_11570:HG2_Ill_MetaSV_4505:HG4_PB_SVrefine2Falcon1Dovetail_4481:HG2_PB_SVrefine2Falcon1plusDovetail_10539:HG2_PB_assemblyticsfalcon_23840:HG4_PB_pbsv_7386:HG2_PB_HySA_13687:HG4_PB_HySA_10923:HG3_PB_pbsv_7152;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_4505:HG2_Ill_SVrefine2DISCOVARplusDovetail_11570:HG4_Ill_GATKHCSBGrefine_5248:HG4_Ill_MetaSV_4701:HG4_Ill_SVrefine2DISCOVARDovetail_5497;NumExactMatchSVs=5;ClusterMaxShiftDist=0.134831;ClusterMaxSizeDiff=0.134831;ClusterMaxEditDist=0.293478;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=171;DistBack=42528;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=162;REFWIDENED=6:150910714-150910875;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4820.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:27:0|1:30:1:0:26:./.:0:0:0:0:0/1:32:13:./.:.:.:.:.:.
chr6	151990324	HG2_PB_SVrefine2Falcon1plusDovetail_10543	ATGGG	GGAGCTGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGCTGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGCTGGGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGAGAGAGAGAGA	10	PASS	ClusterIDs=HG3_PB_pbsv_7155:HG3_PB_HySA_11341:HG4_PB_SVrefine2Falcon1Dovetail_4484:HG4_PB_assemblyticsfalcon_23247:HG2_PB_assemblyticsfalcon_23848:HG2_PB_SVrefine2Falcon1plusDovetail_10543:HG2_PB_pbsv_7381:HG4_PB_pbsv_7393;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10543:HG2_PB_assemblyticsfalcon_23848;NumExactMatchSVs=2;ClusterMaxShiftDist=0.144737;ClusterMaxSizeDiff=0.144737;ClusterMaxEditDist=0.249201;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=143;DistBack=33094;DistForward=97311;DistMin=33094;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=6:151990274-151990329;PctSeqSimilarity=0.9832;PctSizeSimilarity=0.9662;PctRecOverlap=0.9799;SizeDiff=-5;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4821.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:0|1:26:1:2:26:./.:0:0:0:0:0/1:25:4:./.:.:.:.:.:.
chr6	152460852	HG2_Ill_Krunchall_10717	A	AAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_7384:HG3_PB_pbsv_7158:HG4_PB_assemblyticsfalcon_23249:HG4_Ill_Krunchall_11058:HG3_Ill_Krunchall_10457:HG2_Ill_Krunchall_10717:HG4_PB_pbsv_7396;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_Krunchall_10717:HG3_Ill_Krunchall_10457;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0902256;ClusterMaxSizeDiff=0.075188;ClusterMaxEditDist=0.230769;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=10;DistForward=11759;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=15;REFWIDENED=6:152460851-152460868;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4822.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:22:0|1:26:3:1:16:./.:0:0:0:0:0/1:24:14:./.:.:.:.:.:.
chr6	153429849	HG2_PB_PB10Xdip_24767	T	ACATTCCGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCGGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAGAATGGACTTTCCCAGGCCAGCTGTGGTGGCTCACGACTGTAATCCCAGCACTGTGGCAGGCCAAGGTGGGCAGATCACCTGAGATCAGGAGTTCAAGACCAGCCTGACCAACACGGAGAAACCCCGTCTCTACTAAAAATAAAAAAAATTAGCTGGGCGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGTTGTGAGCTGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAGAGGGAAACTCCATCAAAAAAAAAAAAAAAAAAAAGGACTTTCTCAAAGAAAATGTATTTAAATGTCTGCACCAATAATTCCAGCATGTGTATGAATAAATATGATATGTCCTTTACAAAAAAAAAAAAAAAAAAAAAAAAGAAAATTCCCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5378:HG4_PB_pbsv_7405:HG2_PB_pbsv_7392:HG2_PB_PB10Xdip_24767:HG4_PB_HySA_10945:HG2_PB_assemblyticsfalcon_23859:HG2_Ill_breakscan11_3763:HG2_PB_SVrefine2Falcon1plusDovetail_10547;NumClusterSVs=8;ExactMatchIDs=HG2_PB_PB10Xdip_24767;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0790378;ClusterMaxSizeDiff=0.0790378;ClusterMaxEditDist=0.182934;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=865;DistBack=12;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=6:153429837-153429856;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9988;PctRecOverlap=0.985;SizeDiff=1;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=99;MatchId=4823.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:54:0|1:50:0:0:46:./.:0:0:0:0:0/1:34:9:0/1:32:106:.:1033:.
chr6	153633369	HG2_PB_SVrefine2PB10Xhap12_5379	T	TTTTTTCTCTGCCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGTTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAGGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGTATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4448:HG3_PB_pbsv_7164:HG4_PB_pbsv_7406:HG2_PB_HySA_13710:HG2_PB_pbsv_7393:HG2_PB_assemblyticsfalcon_23862:HG2_PB_assemblyticsPBcR_23105:HG4_PB_assemblyticsfalcon_23258:HG3_PB_HySA_11355:HG4_PB_SVrefine2PBcRDovetail_3651:HG4_Ill_MetaSV_4707:HG3_Ill_MetaSV_4682:HG3_Ill_GATKHCSBGrefine_5127:HG2_PB_SVrefine2PB10Xhap12_5379:HG2_PB_SVrefine2Falcon1plusDovetail_10548:HG2_Ill_MetaSV_4509:HG2_Ill_GATKHCSBGrefine_5171:HG2_10X_SVrefine210Xhap12_5308:HG3_PB_SVrefine2PBcRDovetail_3356:HG2_PB_SVrefine2PBcRplusDovetail_9814:HG4_PB_SVrefine2Falcon1Dovetail_4489:HG4_PB_HySA_10946:HG2_PB_PB10Xdip_24768:HG2_Ill_breakscan11_3764;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5308:HG2_Ill_GATKHCSBGrefine_5171:HG2_Ill_MetaSV_4509:HG2_PB_SVrefine2Falcon1plusDovetail_10548:HG2_PB_SVrefine2PB10Xhap12_5379:HG3_Ill_GATKHCSBGrefine_5127:HG3_Ill_MetaSV_4682:HG4_Ill_MetaSV_4707:HG4_PB_SVrefine2PBcRDovetail_3651;NumExactMatchSVs=9;ClusterMaxShiftDist=0.140575;ClusterMaxSizeDiff=0.140575;ClusterMaxEditDist=0.202572;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=316;DistBack=48687;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:153633370-153633385;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4824.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:1:14:0:16:./.:0:0:0:0:1/1:0:22:1/1:1:64:.:.:.
chr6	154923883	HG2_Ill_GATKHCSBGrefine_5188	T	TGTAATACATCCCAAACGGAATAAGATGTGATTAGGAGAATAATCATTTGCCTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5319:HG2_PB_pbsv_7410:HG2_PB_HySA_13734:HG3_Ill_svaba_9687:HG3_Ill_manta_1768:HG3_Ill_SVrefine2DISCOVARDovetail_5696:HG3_Ill_Krunchall_10487:HG3_Ill_GATKHC_12406:HG3_Ill_GATKHCSBGrefine_5134:HG3_Ill_FB_6794:HG3_Ill_250bpfermikitraw_10143:HG3_Ill_150bpfermikitraw_9874:HG2_PB_SVrefine2Falcon1plusDovetail_10557:HG2_Ill_svaba_9603:HG2_Ill_Krunchall_10754:HG2_Ill_GATKHC_12416:HG2_Ill_GATKHCSBGrefine_5188:HG2_Ill_250bpfermikitraw_10433:HG2_Ill_150bpfermikitraw_9831;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5319:HG3_Ill_svaba_9687:HG3_Ill_manta_1768:HG3_Ill_SVrefine2DISCOVARDovetail_5696:HG3_Ill_Krunchall_10487:HG3_Ill_GATKHC_12406:HG3_Ill_GATKHCSBGrefine_5134:HG3_Ill_FB_6794:HG3_Ill_250bpfermikitraw_10143:HG3_Ill_150bpfermikitraw_9874:HG2_PB_SVrefine2Falcon1plusDovetail_10557:HG2_Ill_svaba_9603:HG2_Ill_Krunchall_10754:HG2_Ill_GATKHC_12416:HG2_Ill_GATKHCSBGrefine_5188:HG2_Ill_250bpfermikitraw_10433:HG2_Ill_150bpfermikitraw_9831;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0545455;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.108108;PBcalls=3;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=53;DistBack=45690;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=6:154923884-154923936;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4826.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:39:./.:11:15:2:7:./.:0:0:0:0:0/1:30:19:./.:.:.:.:.:.
chr6	155277473	HG2_Ill_GATKHCSBGrefine_5190	C	CATCATTCCTTTTTTTTTTTTTTTTTTTTTTTGATACAGAGTCTCACTCTGTTGCCCAGGCAGTGTCGCA	20	PASS	ClusterIDs=HG3_PB_pbsv_7176:HG2_Ill_breakscan11_3767:HG2_PB_pbsv_7412:HG4_PB_HySA_10978:HG4_PB_assemblyticsfalcon_23277:HG3_Ill_GATKHC_12412:HG3_Ill_GATKHCSBGrefine_5136:HG2_PB_assemblyticsPBcR_23126:HG4_Ill_GATKHC_12473:HG4_Ill_GATKHCSBGrefine_5268:HG2_PB_assemblyticsfalcon_23888:HG2_Ill_manta_2163:HG2_Ill_GATKHC_12423:HG2_Ill_GATKHCSBGrefine_5190:HG4_Ill_svaba_9692:HG3_Ill_svaba_9691:HG2_Ill_svaba_9607:HG2_PB_PB10Xdip_24779:HG3_PB_HySA_11378:HG2_PB_HySA_13740:HG4_PB_pbsv_7425;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5190:HG2_Ill_GATKHC_12423:HG2_Ill_manta_2163:HG2_PB_assemblyticsfalcon_23888:HG4_Ill_GATKHCSBGrefine_5268:HG4_Ill_GATKHC_12473;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0979021;ClusterMaxSizeDiff=0.0699301;ClusterMaxEditDist=0.25;PBcalls=10;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=0;DistForward=69481;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=6:155277474-155277476;PctSeqSimilarity=0.9929;PctSizeSimilarity=0.9857;PctRecOverlap=0.9718;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4827.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:0:16:0:26:./.:0:0:0:0:1/1:0:22:./.:.:.:.:.:.
chr6	156081224	HG2_10X_SVrefine210Xhap12_5328	AA	TCAGTTTGTAACAAAGGATGAGGTGGAGTGAGTGAGCAGAATAACAGGGAAATACCCTTAGTGAAAAAAAGACACAGTGACAACAAATACCTCAGTGTCAGTGATGGGGCCCACTCCTAGAACAGTACTGAGATGCAAACCCG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4517:HG4_Ill_manta_1871:HG4_Ill_SVrefine2DISCOVARDovetail_5524:HG2_Ill_manta_2169:HG2_Ill_SpiralSDKrefine_15261:HG2_10X_SVrefine210Xhap12_5328:HG4_PB_SVrefine2PBcRDovetail_3662:HG4_PB_pbsv_7428:HG2_PB_pbsv_7417:HG4_Ill_MetaSV_4716;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5328:HG2_Ill_SpiralSDKrefine_15261:HG2_Ill_manta_2169:HG4_Ill_SVrefine2DISCOVARDovetail_5524:HG4_Ill_manta_1871;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0482759;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.116438;PBcalls=3;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=141;DistBack=0;DistForward=10936;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:156081226-156081223;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.986;PctRecOverlap=0.979;SizeDiff=-2;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=98;MatchId=4828.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:23:./.:13:10:23:12:./.:0:0:0:0:0/1:33:21:./.:.:.:.:.:.
chr6	156092172	HG3_Ill_150bpfermikitraw_9885	T	TTCCCTTCCCTCCCCTTCCCTTCCTTTCCCTCCCCCTCCCTCCCCTTCCCTTCCCCTCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5396:HG2_PB_SVrefine2Falcon1plusDovetail_10560:HG2_PB_pbsv_7418:HG2_PB_HySA_13752:HG2_PB_HySA_13751:HG4_PB_HySA_10989:HG4_Ill_Krunchall_11097:HG4_Ill_250bpfermikitraw_10448:HG3_Ill_scalpel_7483:HG3_Ill_GATKHC_12421:HG3_Ill_GATKHCSBGrefine_5138:HG3_Ill_FB_6802:HG3_Ill_250bpfermikitraw_10156:HG3_Ill_150bpfermikitraw_9885:HG2_Ill_Krunchall_10769:HG2_Ill_GATKHCSBGrefine_5194:HG2_Ill_150bpfermikitraw_9846:HG4_Ill_manta_1872:HG4_Ill_GATKHC_12489:HG4_Ill_GATKHCSBGrefine_5272:HG4_Ill_150bpfermikitraw_10028:HG2_Ill_GATKHC_12436:HG2_Ill_250bpfermikitraw_10447:HG2_PB_PB10Xdip_24782:HG2_Ill_breakscan11_3768:HG3_PB_SVrefine2PBcRDovetail_3363:HG2_PB_SVrefine2PBcRplusDovetail_9825:HG4_PB_SVrefine2PBcRDovetail_3663:HG4_Ill_SVrefine2DISCOVARDovetail_5525:HG3_Ill_SVrefine2DISCOVARDovetail_5701:HG2_Ill_SVrefine2DISCOVARplusDovetail_11606:HG2_10X_SVrefine210Xhap12_5329:HG4_PB_pbsv_7429;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9846:HG2_Ill_GATKHCSBGrefine_5194:HG2_Ill_Krunchall_10769:HG3_Ill_150bpfermikitraw_9885:HG3_Ill_250bpfermikitraw_10156:HG3_Ill_FB_6802:HG3_Ill_GATKHCSBGrefine_5138:HG3_Ill_GATKHC_12421:HG3_Ill_scalpel_7483:HG4_Ill_250bpfermikitraw_10448:HG4_Ill_Krunchall_11097;NumExactMatchSVs=11;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.316667;PBcalls=11;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=59;DistBack=-1;DistForward=4;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=6:156092168-156092203;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4829.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:61:1/1:2:33:2:15:./.:0:0:0:0:1/1:0:27:./.:.:.:.:.:.
chr6	156512561	HG4_PB_pbsv_7432	A	AAAAGGAAAGGAAAAGGAGAAAGGGAAGGGAAGGGAAGGGAAGGGAAAGGGAAGGGAAGGGAAGGGAAGGAAGGGAAAGGGAAGGGAAGGGAGGGAAGGGGGAAGGGAAGGGAAGGGAAGGGAAGGAAAGGGAAGGGAAGGGAAGGGAAGGGAGGTGACTAAGGGAAGGGAAGGGAAGGGAAAGGGAGGGAAGGGAAGGGAGGGAAGGGAGGGAAAGGGAAGGGAAGGGAGGGAAGGGAAGGGAAGGGAAGGAAGGGAAGGGCAAGGGAAGGGAAGGGAAAAAGGAAAGGGAAGGGAAGGGAAGGGAAGGGGAGGGAAGGGAAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAAGGGATTAGGGAGGGAAGGGAAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10561:HG4_PB_SVrefine2Falcon1Dovetail_4504:HG2_PB_SVrefine2PBcRplusDovetail_9826:HG2_PB_HySA_13763:HG4_PB_pbsv_7432:HG2_PB_pbsv_7421;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_7432;NumExactMatchSVs=1;ClusterMaxShiftDist=0.311248;ClusterMaxSizeDiff=0.311248;ClusterMaxEditDist=0.320493;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=374;DistBack=18;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=156;REFWIDENED=6:156512534-156512689;PctSeqSimilarity=0.9406;PctSizeSimilarity=0.9492;PctRecOverlap=0.9147;SizeDiff=19;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=93;MatchId=4830.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:63:./.:4:6:1:43:./.:0:0:0:0:./.:1:2:0/1:4:13:.:.:.
chr6	157534300	HG4_Ill_SVrefine2DISCOVARDovetail_5528	A	AGTAAAACGTCTTAGTCCATTGAAGGCCTGTATTTGGCACTAAATACTAAATACTAAATTTAGTGCCAATACAGGCCTTCAATGGACTAAGCCGTTGTACT	20	PASS	ClusterIDs=HG3_PB_HySA_11399:HG3_PB_pbsv_7186:HG2_PB_pbsv_7424:HG4_PB_pbsv_7435:HG2_Ill_breakscan11_3769:HG4_PB_assemblyticsfalcon_23293:HG2_PB_assemblyticsfalcon_23906:HG4_PB_SVrefine2PBcRDovetail_3667:HG4_PB_SVrefine2Falcon1Dovetail_4506:HG4_Ill_svaba_9715:HG4_Ill_manta_1874:HG4_Ill_SVrefine2DISCOVARDovetail_5528:HG4_Ill_MetaSV_4718:HG4_Ill_Krunchall_11110:HG4_Ill_GATKHCSBGrefine_5277:HG4_Ill_Cortex_3298:HG4_Ill_250bpfermikitraw_10463:HG4_Ill_150bpfermikitraw_10042:HG3_PB_SVrefine2PBcRDovetail_3367:HG3_PB_SVrefine2Falcon1Dovetail_4458:HG3_Ill_svaba_9710:HG3_Ill_manta_1772:HG3_Ill_Spiral_8206:HG3_Ill_SVrefine2DISCOVARDovetail_5707:HG3_Ill_MetaSV_4685:HG3_Ill_Krunchall_10507:HG3_Ill_GATKHCSBGrefine_5144:HG3_Ill_Cortex_3318:HG3_Ill_250bpfermikitraw_10167:HG3_Ill_150bpfermikitraw_9896:HG2_PB_SVrefine2PBcRplusDovetail_9829:HG2_PB_SVrefine2Falcon1plusDovetail_10563:HG2_Ill_svaba_9627:HG2_Ill_manta_2171:HG2_Ill_SpiralSDKrefine_15271:HG2_Ill_SVrefine2DISCOVARplusDovetail_11611:HG2_Ill_MetaSV_4518:HG2_Ill_Krunchall_10782:HG2_Ill_GATKHCSBGrefine_5197:HG2_Ill_Cortex_8055:HG2_Ill_250bpfermikitraw_10460:HG2_Ill_150bpfermikitraw_9859:HG2_10X_SVrefine210Xhap12_5334;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5334:HG2_Ill_150bpfermikitraw_9859:HG2_Ill_250bpfermikitraw_10460:HG2_Ill_Cortex_8055:HG2_Ill_GATKHCSBGrefine_5197:HG2_Ill_Krunchall_10782:HG2_Ill_MetaSV_4518:HG2_Ill_SVrefine2DISCOVARplusDovetail_11611:HG2_Ill_SpiralSDKrefine_15271:HG2_Ill_manta_2171:HG2_Ill_svaba_9627:HG2_PB_SVrefine2Falcon1plusDovetail_10563:HG2_PB_SVrefine2PBcRplusDovetail_9829:HG3_Ill_150bpfermikitraw_9896:HG3_Ill_250bpfermikitraw_10167:HG3_Ill_Cortex_3318:HG3_Ill_GATKHCSBGrefine_5144:HG3_Ill_Krunchall_10507:HG3_Ill_MetaSV_4685:HG3_Ill_SVrefine2DISCOVARDovetail_5707:HG3_Ill_Spiral_8206:HG3_Ill_manta_1772:HG3_Ill_svaba_9710:HG3_PB_SVrefine2Falcon1Dovetail_4458:HG3_PB_SVrefine2PBcRDovetail_3367:HG4_Ill_150bpfermikitraw_10042:HG4_Ill_250bpfermikitraw_10463:HG4_Ill_Cortex_3298:HG4_Ill_GATKHCSBGrefine_5277:HG4_Ill_Krunchall_11110:HG4_Ill_MetaSV_4718:HG4_Ill_SVrefine2DISCOVARDovetail_5528:HG4_Ill_manta_1874:HG4_Ill_svaba_9715:HG4_PB_SVrefine2Falcon1Dovetail_4506:HG4_PB_SVrefine2PBcRDovetail_3667;NumExactMatchSVs=36;ClusterMaxShiftDist=0.251256;ClusterMaxSizeDiff=0.251256;ClusterMaxEditDist=0.271357;PBcalls=12;Illcalls=30;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=29;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=100;DistBack=65231;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=6:157534301-157534310;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4831.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:./.:0:3:0:2:./.:0:0:0:0:0/1:6:43:./.:.:.:.:.:.
chr6	158523536	HG3_Ill_svaba_9721	A	ACAGGTGCGAGCCACCATGCCCAGCTCCCTCTGTATTGTGTTTAAAAATATTTTTCTTTGGC	20	PASS	ClusterIDs=HG2_PB_pbsv_7433:HG4_PB_assemblyticsfalcon_23304:HG3_PB_pbsv_7195:HG3_PB_assemblyticsfalcon_23759:HG4_PB_pbsv_7443:HG2_Ill_breakscan11_3772:HG3_PB_HySA_11416:HG2_PB_HySA_13787:HG4_PB_SVrefine2PBcRDovetail_3671:HG4_PB_SVrefine2Falcon1Dovetail_4510:HG4_Ill_svaba_9726:HG4_Ill_manta_1876:HG4_Ill_SVrefine2DISCOVARDovetail_5535:HG4_Ill_Krunchall_11124:HG4_Ill_GATKHC_12524:HG4_Ill_GATKHCSBGrefine_5283:HG4_Ill_250bpfermikitraw_10473:HG4_Ill_150bpfermikitraw_10051:HG3_PB_SVrefine2PBcRDovetail_3375:HG3_PB_SVrefine2Falcon1Dovetail_4462:HG3_Ill_svaba_9721:HG3_Ill_manta_1775:HG3_Ill_Spiral_8216:HG3_Ill_SVrefine2DISCOVARDovetail_5710:HG3_Ill_Krunchall_10521:HG3_Ill_GATKHC_12450:HG3_Ill_GATKHCSBGrefine_5148:HG3_Ill_250bpfermikitraw_10179:HG2_Ill_svaba_9635:HG2_Ill_manta_2174:HG2_Ill_SpiralSDKrefine_15278:HG2_Ill_Krunchall_10792:HG2_Ill_GATKHC_12469:HG2_Ill_GATKHCSBGrefine_5202:HG2_Ill_250bpfermikitraw_10472:HG2_Ill_150bpfermikitraw_9868:HG2_10X_SVrefine210Xhap12_5338:HG2_PB_SVrefine2Falcon1plusDovetail_10569;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5338:HG2_Ill_150bpfermikitraw_9868:HG2_Ill_250bpfermikitraw_10472:HG2_Ill_GATKHCSBGrefine_5202:HG2_Ill_GATKHC_12469:HG2_Ill_Krunchall_10792:HG2_Ill_SpiralSDKrefine_15278:HG2_Ill_manta_2174:HG2_Ill_svaba_9635:HG3_Ill_250bpfermikitraw_10179:HG3_Ill_GATKHCSBGrefine_5148:HG3_Ill_GATKHC_12450:HG3_Ill_Krunchall_10521:HG3_Ill_SVrefine2DISCOVARDovetail_5710:HG3_Ill_Spiral_8216:HG3_Ill_manta_1775:HG3_Ill_svaba_9721:HG3_PB_SVrefine2Falcon1Dovetail_4462:HG3_PB_SVrefine2PBcRDovetail_3375:HG4_Ill_150bpfermikitraw_10051:HG4_Ill_250bpfermikitraw_10473:HG4_Ill_GATKHCSBGrefine_5283:HG4_Ill_GATKHC_12524:HG4_Ill_Krunchall_11124:HG4_Ill_SVrefine2DISCOVARDovetail_5535:HG4_Ill_manta_1876:HG4_Ill_svaba_9726:HG4_PB_SVrefine2Falcon1Dovetail_4510:HG4_PB_SVrefine2PBcRDovetail_3671;NumExactMatchSVs=29;ClusterMaxShiftDist=0.112903;ClusterMaxSizeDiff=0.112903;ClusterMaxEditDist=0.267717;PBcalls=12;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=61;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=6:158523537-158523539;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4832.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:29:0|1:23:0:1:25:./.:0:0:0:0:0/1:24:34:./.:.:.:.:.:.
chr6	158638839	HG2_PB_SVrefine2PBcRplusDovetail_9835	T	TGAAATTTCATTGCTGGAGTCTTTGCCGCCGCGCCGGCGAGCGCCGCCCGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGCGGGGCCCCAGGGCAAGGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCAGACGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCGGCCCCGCCGCCCCATCTGGGACGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGTGTTTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGCGTCTCCGCCCGGCAGCCACCCCGTCTGGGAGGGAGGTGGGGAGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTCGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGGTCAGCCCCCCACCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGGTCAGCCCCCCACCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGAGGTGGGGGGGTCAGCCCCCCCCCCCCCCCCCCCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCTGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGAGAACGGGCCAGGGTGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCTGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_24789:HG4_PB_pbsv_7445:HG4_PB_assemblyticsfalcon_23312:HG4_PB_HySA_11020:HG2_PB_HySA_13792:HG2_PB_pbsv_7438:HG2_PB_SVrefine2PB10Xhap12_5403:HG2_PB_SVrefine2PBcRplusDovetail_9835:HG4_PB_SVrefine2Falcon1Dovetail_4513;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9835;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0689323;ClusterMaxSizeDiff=0.0689323;ClusterMaxEditDist=0.273065;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=3060;DistBack=1344;DistForward=231;DistMin=231;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=6:158638840-158638855;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9919;PctRecOverlap=0.9922;SizeDiff=-25;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4833.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:38:0|1:36:0:1:28:./.:0:0:0:0:0/1:20:14:0/1:127:231:.:3037:.
chr6	158683980	HG4_Ill_manta_1877	G	GCCTTAGATGTTTCCTCTGTGAGGGAGGGAGTTGCCACATCCACCTAGGATATTGTTAGAGCCTGTGTGGCTAAATGATGATCTTTCAAAATCTTT	20	PASS	ClusterIDs=HG4_PB_pbsv_7450:HG2_PB_pbsv_7441:HG2_10X_SVrefine210Xhap12_5340:HG3_PB_SVrefine2Falcon1Dovetail_4467:HG4_PB_SVrefine2PBcRDovetail_3675:HG4_Ill_svaba_9740:HG4_Ill_manta_1877:HG4_Ill_SVrefine2DISCOVARDovetail_5537:HG4_Ill_Krunchall_11135:HG4_Ill_GATKHCSBGrefine_5287:HG4_Ill_Cortex_3301:HG4_Ill_250bpfermikitraw_10481:HG4_Ill_150bpfermikitraw_10060:HG2_Ill_svaba_9646:HG2_Ill_manta_2176:HG2_Ill_SpiralSDKrefine_15284:HG2_Ill_Krunchall_10801:HG2_Ill_GATKHCSBGrefine_5206:HG2_Ill_Cortex_8060:HG2_Ill_250bpfermikitraw_10480:HG2_Ill_150bpfermikitraw_9876:HG3_PB_assemblyticsfalcon_23764:HG4_PB_HySA_11021:HG2_PB_HySA_13793;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9876:HG2_Ill_250bpfermikitraw_10480:HG2_Ill_Cortex_8060:HG2_Ill_GATKHCSBGrefine_5206:HG2_Ill_Krunchall_10801:HG2_Ill_SpiralSDKrefine_15284:HG2_Ill_manta_2176:HG2_Ill_svaba_9646:HG4_Ill_150bpfermikitraw_10060:HG4_Ill_250bpfermikitraw_10481:HG4_Ill_Cortex_3301:HG4_Ill_GATKHCSBGrefine_5287:HG4_Ill_Krunchall_11135:HG4_Ill_SVrefine2DISCOVARDovetail_5537:HG4_Ill_manta_1877:HG4_Ill_svaba_9740:HG4_PB_SVrefine2PBcRDovetail_3675;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0518135;ClusterMaxSizeDiff=0.0412371;ClusterMaxEditDist=0.142132;PBcalls=7;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=95;DistBack=13602;DistForward=5833;DistMin=5833;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:158683981-158683980;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4834.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:37:0|1:37:0:0:37:./.:0:0:0:0:0/1:25:17:./.:.:.:.:.:.
chr6	158752812	HG4_PB_SVrefine2Falcon1Dovetail_4515	CAC	TATATATACGTGTATATATACACGTATATAATATATATATACGTGTATATATACACGTATATATATATATACGTGTATATATATATATATACGTGTATATATACACGTATATATATATATATATAT	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_23926:HG4_PB_SVrefine2PBcRDovetail_3676:HG2_PB_SVrefine2Falcon1plusDovetail_10574:HG4_PB_assemblyticsfalcon_23318:HG4_PB_SVrefine2Falcon1Dovetail_4515:HG2_PB_SVrefine2PB10Xhap12_5405;NumClusterSVs=6;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_4515:HG4_PB_assemblyticsfalcon_23318;NumExactMatchSVs=2;ClusterMaxShiftDist=0.184615;ClusterMaxSizeDiff=0.184615;ClusterMaxEditDist=0.232558;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=123;DistBack=1;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=46;REFWIDENED=6:158752766-158752811;PctSeqSimilarity=0.9311;PctSizeSimilarity=0.8786;PctRecOverlap=0.6028;SizeDiff=-17;StartDistance=47;EndDistance=49;GTMatch=0;TruScore=80;MatchId=4835.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:48:./.:3:27:24:13:./.:0:0:0:0:./.:1:14:./.:.:.:.:.:.
chr6	158987437	HG2_PB_SVrefine2PBcRplusDovetail_9839	G	GTGAGGGAGGTGATGGGGTGAGGAAGATGATGGCGAGGAGTTGATGAGGGAGGTGATGGTGAGGGAGGTGATGGTGAGCTCCTGAGGGAGGTGATGGGGTGAAGGAGATGATGGTGAGGAGTTGAGGGAGGTGATGGGGTGGAGGGAGGTGATACGGTGAGGGAGGTGATGGTGAGGAGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10577:HG2_PB_PB10Xdip_24795:HG4_PB_pbsv_7455:HG3_PB_HySA_11428:HG2_PB_HySA_13799:HG2_PB_pbsv_7446:HG4_PB_SVrefine2Falcon1Dovetail_4517:HG3_PB_SVrefine2PBcRDovetail_3378:HG3_PB_SVrefine2Falcon1Dovetail_4469:HG2_PB_SVrefine2PBcRplusDovetail_9839:HG2_PB_SVrefine2PB10Xhap12_5409:HG2_PB_SVrefine2Falcon2Bionano_3629;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10577:HG4_PB_SVrefine2Falcon1Dovetail_4517:HG3_PB_SVrefine2PBcRDovetail_3378:HG3_PB_SVrefine2Falcon1Dovetail_4469:HG2_PB_SVrefine2PBcRplusDovetail_9839:HG2_PB_SVrefine2PB10Xhap12_5409:HG2_PB_SVrefine2Falcon2Bionano_3629;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0720222;ClusterMaxSizeDiff=0.0509915;ClusterMaxEditDist=0.252809;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=179;DistBack=-178;DistForward=-1;DistMin=-178;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=365;REFWIDENED=6:158987438-158987802;PctSeqSimilarity=0.9629;PctSizeSimilarity=0.9609;PctRecOverlap=0.162;SizeDiff=7;StartDistance=-147;EndDistance=-147;GTMatch=0;TruScore=69;MatchId=4837.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:54:1/1:1:9:4:15:./.:0:0:0:0:./.:4:0:./.:.:.:.:.:.
chr6	159204426	HG2_Ill_GATKHCSBGrefine_5214	T	TTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGTCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10580:HG2_PB_HySA_13812:HG2_PB_pbsv_7450:HG4_PB_pbsv_7459:HG3_PB_pbsv_7210:HG3_PB_HySA_11440:HG3_Ill_GATKHCSBGrefine_5160:HG4_Ill_GATKHCSBGrefine_5294:HG2_Ill_GATKHCSBGrefine_5214:HG4_PB_assemblyticsfalcon_23332:HG3_Ill_MetaSV_4690:HG4_Ill_MetaSV_4722:HG2_Ill_MetaSV_4522:HG3_PB_assemblyticsfalcon_23776:HG2_PB_assemblyticsfalcon_23936:HG3_PB_SVrefine2PBcRDovetail_3383:HG2_PB_SVrefine2Falcon2Bionano_3633;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5214:HG4_Ill_GATKHCSBGrefine_5294;NumExactMatchSVs=2;ClusterMaxShiftDist=0.115677;ClusterMaxSizeDiff=0.115677;ClusterMaxEditDist=0.161339;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=18013;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:159204427-159204427;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4839.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:41:0|1:33:2:1:30:./.:0:0:0:0:0/1:21:6:0/1:10:44:.:.:.
chr6	159346338	HG3_Ill_GATKHCSBGrefine_5164	A	AGAAGGAAGGAAGGAAGGAAGGGGAAGGAAGGGAAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGAAGGAAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10582:HG3_Ill_GATKHC_12474:HG3_Ill_GATKHCSBGrefine_5164:HG3_Ill_250bpfermikitraw_10196:HG2_Ill_GATKHC_12500:HG2_PB_HySA_13815:HG2_PB_SVrefine2Falcon2Bionano_3635:HG2_PB_pbsv_7453;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_12500:HG3_Ill_250bpfermikitraw_10196:HG3_Ill_GATKHCSBGrefine_5164:HG3_Ill_GATKHC_12474;NumExactMatchSVs=4;ClusterMaxShiftDist=0.131387;ClusterMaxSizeDiff=0.131387;ClusterMaxEditDist=0.26087;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=11998;DistForward=2190;DistMin=2190;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=84;REFWIDENED=6:159346274-159346357;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4840.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:27:0|1:43:12:0:12:./.:0:0:0:0:0/1:23:14:./.:.:.:1627:.:.
chr6	159725844	HG2_PB_SVrefine2Falcon2Bionano_3639	T	TGAGGAGGGGTGAGGGAGGAGGAAGGAGGGGTGAGGGAGGAGGGGTGAGGGAGGAGGGGTGAGGGGTGAGGGGTGAGGGAGGAGGGGTGAGGGAGGAGGGGTGAGGGAGGAGGGAGGAGGGGTGAGGGGTGAGGGGTGAGGGGTGAGGGAGGAGGGAGGAGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3773:HG4_PB_HySA_11041:HG4_PB_pbsv_7465:HG3_PB_pbsv_7217:HG4_PB_HySA_11040:HG2_PB_pbsv_7458:HG2_PB_HySA_13822:HG3_PB_HySA_11448:HG2_PB_SVrefine2Falcon1plusDovetail_10586:HG3_PB_SVrefine2PBcRDovetail_3388:HG3_PB_SVrefine2Falcon1Dovetail_4476:HG4_PB_SVrefine2Falcon1Dovetail_4525:HG4_PB_SVrefine2PBcRDovetail_3681:HG4_Ill_SVrefine2DISCOVARDovetail_5541:HG2_PB_SVrefine2PBcRplusDovetail_9846:HG2_PB_SVrefine2PB10Xhap12_5416:HG2_PB_SVrefine2Falcon2Bionano_3639:HG2_Ill_SVrefine2DISCOVARplusDovetail_11632:HG2_10X_SVrefine210Xhap12_5349:HG2_PB_PB10Xdip_24802;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5349:HG2_Ill_SVrefine2DISCOVARplusDovetail_11632:HG2_PB_SVrefine2Falcon2Bionano_3639:HG2_PB_SVrefine2PB10Xhap12_5416:HG2_PB_SVrefine2PBcRplusDovetail_9846:HG4_Ill_SVrefine2DISCOVARDovetail_5541:HG4_PB_SVrefine2PBcRDovetail_3681;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0674847;ClusterMaxSizeDiff=0.0613497;ClusterMaxEditDist=0.231707;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=161;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=27;REFWIDENED=6:159725845-159725871;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4841.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:1:18:1:18:./.:0:0:0:0:0/1:2:14:./.:.:.:.:.:.
chr6	160025896	HG2_Ill_manta_2185	T	TGTGGTGTGAATGTATATGTGGTGTGTATAGTATGTATGTGTGTGGTGTGTGTGGTGTGAATGTGTATGTGTGTGAGTGGATGGTGGGTGTGGAGTGTGTGGTATATGTGTCTGTGTGTGTGTAGTGTGTGAGTGCATGGGTGGCTGTGGTGTGTGGTGTGACTGTGTGTGGTGTGTGTGATATATGTTGTGAGTGGATAGTGAGTGTGGCGTGTGGTGAGTGTGAGTGGATGGTGGGTGTGGTGTGTGAGGTGTGAGTGTGTGTGTGGTGTCTGTTGTATGTGTGCAAGTGGATGGTGAGTGTGGTATGTGTGATGTGAATGTGTGTGTGGTGTGTGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10587:HG2_PB_pbsv_7459:HG4_Ill_manta_1885:HG3_PB_pbsv_7218:HG4_Ill_MetaSV_4725:HG4_Ill_GATKHCSBGrefine_5299:HG3_Ill_manta_1783:HG3_Ill_MetaSV_4694:HG3_Ill_GATKHCSBGrefine_5168:HG2_Ill_manta_2185:HG2_Ill_MetaSV_4526:HG2_Ill_GATKHCSBGrefine_5220:HG4_PB_HySA_11043:HG2_PB_PB10Xdip_24803:HG2_Ill_breakscan11_3774:HG4_PB_pbsv_7466:HG3_PB_SVrefine2Falcon1Dovetail_4477:HG4_PB_SVrefine2PBcRDovetail_3682:HG4_Ill_SVrefine2DISCOVARDovetail_5545:HG3_PB_SVrefine2PBcRDovetail_3389:HG3_Ill_SVrefine2DISCOVARDovetail_5719:HG2_PB_SVrefine2PBcRplusDovetail_9847:HG2_PB_SVrefine2PB10Xhap12_5417:HG2_PB_SVrefine2Falcon2Bionano_3640:HG2_Ill_SVrefine2DISCOVARplusDovetail_11635:HG4_PB_SVrefine2Falcon1Dovetail_4526;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5220:HG2_Ill_MetaSV_4526:HG2_Ill_manta_2185:HG3_Ill_GATKHCSBGrefine_5168:HG3_Ill_MetaSV_4694:HG3_Ill_manta_1783:HG4_Ill_GATKHCSBGrefine_5299:HG4_Ill_MetaSV_4725:HG4_Ill_manta_1885;NumExactMatchSVs=9;ClusterMaxShiftDist=0.092219;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.254237;PBcalls=13;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=338;DistBack=-4;DistForward=16466;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=6:160025897-160025900;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4842.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:1:19:0:26:./.:0:0:0:0:1/1:0:26:1/1:2:137:.:.:.
chr6	160237146	HG2_PB_SVrefine2PBcRplusDovetail_9850	T	TCCCCCACACCCCTCCCCACCCACCCGCCACACCCCTCCCCACCCACCCGCCACACCCCTCCCCTCCCCCCCACCTCCCCCTGCCCCACCCACACCCCTCCCTGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3644:HG3_PB_HySA_11455:HG3_PB_pbsv_7223:HG3_PB_SVrefine2PBcRDovetail_3392:HG4_PB_SVrefine2Falcon1Dovetail_4530:HG3_PB_assemblyticsfalcon_23793:HG2_PB_assemblyticsfalcon_23954:HG2_PB_HySA_13832:HG3_PB_SVrefine2Falcon1Dovetail_4481:HG4_PB_HySA_11047:HG2_PB_SVrefine2Falcon1plusDovetail_10590:HG2_PB_PB10Xdip_24810:HG4_PB_SVrefine2PBcRDovetail_3683:HG2_PB_SVrefine2PBcRplusDovetail_9850:HG2_PB_SVrefine2PB10Xhap12_5421:HG4_PB_pbsv_7468;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9850:HG4_PB_SVrefine2PBcRDovetail_3683;NumExactMatchSVs=2;ClusterMaxShiftDist=0.231579;ClusterMaxSizeDiff=0.231579;ClusterMaxEditDist=0.365591;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=105;DistBack=54262;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=89;REFWIDENED=6:160237147-160237235;PctSeqSimilarity=0.9808;PctSizeSimilarity=0.9619;PctRecOverlap=0.7333;SizeDiff=4;StartDistance=-26;EndDistance=-26;GTMatch=1;TruScore=89;MatchId=4844.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:1:32:3:23:./.:0:0:0:0:./.:0:2:./.:.:.:.:.:.
chr6	160639998	HG2_PB_SVrefine2PBcRplusDovetail_9855	G	GCAGCAGCAGCAATCATTACCATAGTAGCAACAACAGTAGCAGCAACACCAGCAGCAGTAGCAGCAGCAATAGCAACAGTAATAGTAGCAGCAACAGCAATAGCAACAGTAGCAGCATCAGCAACAATAACAGCAACAATAGCAGCAGTAACAACAGCAACAGCAGCAGCAACAATAATAGCAGCCACAGCATCAGTAGCAGCAGCAGCAACAAGAGCAACAATAACAAAAGCAACAATAGCAACAGTAGCAGCAACAGCAATAGCAACAGCAGCATCAGCAACAGCAATAGTATCACAATTAACAACAGCAACAATAGCCACAGCAACAGCAACAGCAGCAGTAGCAACAGAAATCGCAGTAATAACAGTAGCAGCAGCAGCAGCAGCAATCATTACCATAGTAGCAACAACAGTAGCAGCAACACCAGCAGCAATAGTAGCAGCAATAGCAACAGTAATAGTAGCAGCAACAGCAATAGCAACAGTAGCAGCATCAGCAACAACAGCAACAGCAGCAGCAACAATAAGAGCAGCAGCAGCAACAACAACAGTAGCAGCAGCAGCAACAACAGCAACAATAACAAAAGCAACGATAGCAACAGTATCAGCAACAGCAACAGCATCAGCAACAACAGCAACAATAGCAGCAGTAAAAACAGCAACAGCAGCAGCAACAACAGCAACAGCAGCAGCAACAATAAGAGCAGCAACAACAGCAACAGTAGCAGCAGCAGCAACAACAGCAGCAACAACAAAAGCAACAATAGCAACAGTATCAGCAACAGCAACAGCAATAGCAACAAAAGCATCAGCAACAGCAATAGCATCACAATTAACAACAGCAACAGCAGCAGTAGCAACAGAAATCACAGTAACAACAGTAGCAGCAGCAGCAGCAATAATTACCATAGTAGCAACAACAGTAGCAGCAACACCAGCAGCAGTAGCAGCAGCAATAGCAACAGTAATAGTAGCAGCAACAGCAATAGCAACAGTAGCAGCATCAGCAACAACAAGAGCAACAATAGCAGCAGTAACAACAGCAACAGCAGCAGCAACAATAAGAGCAGCAGCAGCAACAACAACAGTAGCAGCAGCAGCAACAACAGCAACAATAACAAAAGCAACGATAGCAACAGTATCAGCAACAGCAACAGCAATAGCAACAGCAGCAGCATCAGCAACAATAGCAGCAGTAAAAACAGCAACAGCAGCAGCAACAACAGCAACAGCAGCAGCAACAATAAGAGCAGCAGCAACAGCAACAGTAGCAGCAGCAGCAACAACAGCAACAATAACAAAAGCAACGATAGCAACAGTATCAGCAACAGCAACAGCAATAGCAACAAAAGCATCAGCAACAGCAATAGCATCACAATTAACAACAGCAACAATAGCCACAGCAACAGCAACAGCAGCAGTAGCAACAGAAATTGCAGTAATAACAGTAGCAGCAGCAGCAGCAATCATTACCATAGTAGCAACAACAGTAGCAGCAACACCAGCAGCAATAGCAGCAGCAATAGCAACAGTAATAGTAGCAGCAACAGCAATAGCAACAGTAGCAGCATCAGCAACAACAGCAACAGCAGCAGCAACAATAAGAGCAGCCGCAGCAACAGCAACAGTAGCAGCAGCAGCAACAACAACAGTAGCAGCAGCAGCAACAACAGCAACAATAACAAAAGCAACAATAGCAACAGTATCAGCAACAGCAATAGCAGCAGCATCAGCAACAACAGCAACAATAGCAGCAGTAAAAACAGCAACAGCAGCAGCAACAACAGCAACAGCAGCAGCAACAATAAGAGCAGCAACAACAGCAACAGTAGCAGCAGCAGCAACAGCAACAATAACAAAAGCAACAATAGCAACAGTATCAGCAACAGCAACAGCAATAGAAACAAAAGCATCAGCAACAGCAATAGCATCACAATTAACAACAGCAACAATAGCCACAGCAACAGCAACAGCAGCAGTAGCAACAGAAATCACAGTAATAACAGTAGCAGCAGCAGCAGCAGCAGCAGCAATCATTACCATAGTAGCAACAACAGTAGCAGCAACACCAGCAGCAATAGTAGCAGCAATAGCAACAGTAATAGTAGCAGCAACAGCAATAGCAACAGTAGCAGCATCGGCAACAAGAGCAACAATAGCAGCAGTAACAACAGCAACAGCAGCAGCAACAATAGGAGCAGCCGCAGCAACAGCAACAGTAGCAGCAGCAGCAACAACAGCAACAATAACAAAAGCAACGATAGCAACAGTATCAGCAACAGCAACAGCAATAGCAACAGCAGCATCAGCAACAGCAATAGCATCACAATTAACAACAGCAACATTAGCCACAGCAACAGCAACAGCAGCAGTAGCAACAGAAATAGCAGTAATAGCAGCAGCAGCAGTAGCAGCAATAATTACAACAATAGCAGCAATAGCAGCAACAACAGCAGTAAGAGCAGCAACAACAATAAAAGCAACAACAACAGCAATAGCAGCAGCAATCATAACAGCAATAGCAGCAGCAGCAACAACGGCAGTAACAATAGCAGTAATGACAACATCAGCAACAGTAGCAGCAACAACAGTGTCAGCAACAGTAGCAGCAGTGACAGCAATAGCAACAGCATCATAATCAACAATGGCAATAACAACAGAAGCAGCAGCAACAACAAAAGCAACAATAGCAGCAATAGTAGCAGCAACCACAACAGTAACAGTAGCAGCAACATCAGCAGTAGTAACAACAGCAGTTGCAGTAGCAATAGTGGTAACAACAGCAGCAGCAGCCATAGTAGTAGCAATGACAACAGCATTAACAACAACAGCAACAATTTCAGCAACAGCAGCAGCAGCAACAGCAACAGCATCGTAGTCAACAACAGCAATAATAATAGAAACAGCAACATAGCAGTAGCAGCAACAACAGCAGCAGCAACAGCAATGTCAGCAACAGGTAGCAGCAGCAACAATAACAAAAGCAACAACAGCAGCAATAGCAGCAACAACAACAAGAGGAGCAACAAAAGTAGCTGCAACAATAACAAAAGCAACAGCAGCAACAACAGCAGCAGCAATAATTATAACAGCAGCAACAACAGCAACGTCAGAAAAAGCAGCAACAGCAATAGCAGAAGCAGCAACAGCAGCAGCAGCAAGAGCAGCAACAACGGTAGCTGTAACAATAACAAAAGTGAACAGCAACAGCAGCAAACAAAACAACACCCACAGCAAAAGCATCAGCAACAGCAACAAAGCAGGAACAACAGTAGCTGCAACAATAACAAAAGCAACAACAGCAGCAACAGCAGTGACAAAAACAACAGCAATAGTAACAGCAGCAACAGTAACAGTAGCAGCAATAGCATCAGCCACAACACTAACAGCGGCAACAACAGTAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4535:HG2_PB_pbsv_7471:HG4_PB_HySA_11056:HG4_PB_pbsv_7477:HG2_PB_PB10Xdip_24819:HG2_Ill_breakscan11_3775:HG2_PB_HySA_13841:HG2_PB_assemblyticsfalcon_23961:HG3_PB_assemblyticsfalcon_23800:HG4_PB_assemblyticsfalcon_23357:HG2_PB_assemblyticsPBcR_23201:HG3_PB_SVrefine2PBcRDovetail_3396:HG3_Ill_SVrefine2DISCOVARDovetail_5724:HG2_PB_SVrefine2Falcon1plusDovetail_10595:HG2_PB_SVrefine2PB10Xhap12_5426:HG3_PB_SVrefine2Falcon1Dovetail_4484:HG4_PB_SVrefine2PBcRDovetail_3687:HG2_PB_SVrefine2PBcRplusDovetail_9855:HG2_PB_SVrefine2Falcon2Bionano_3649;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3649:HG2_PB_SVrefine2PBcRplusDovetail_9855:HG4_PB_SVrefine2PBcRDovetail_3687;NumExactMatchSVs=3;ClusterMaxShiftDist=0.218569;ClusterMaxSizeDiff=0.218256;ClusterMaxEditDist=0.308752;PBcalls=17;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=3405;DistBack=248;DistForward=161;DistMin=161;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=251;REFWIDENED=6:160639999-160640249;PctSeqSimilarity=0.9948;PctSizeSimilarity=0.9991;PctRecOverlap=0.9615;SizeDiff=3;StartDistance=-130;EndDistance=-130;GTMatch=0;TruScore=98;MatchId=4846.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:118:./.:0:3:0:4:./.:0:0:0:0:1/1:0:16:1/1:6:428:.:3436:.
chr6	160656528	HG3_PB_assemblyticsfalcon_23801	AAATTC	TTTTTGCCTTTCAGCTGTGTCTGCTTAATAGGCCCTAGAAGCTGCATACTTTGAAGAGAAACTTAAAGTAGCAAATGAAAAATTTTACAACTACTGACTCTTCTGTCTGTGAATTTATATGTGCTGTGTGTATGATATGAAAGAGTTTTGATTAATAGGTTTAAAAATAATAAGAGCTTAAGTCAAATATTCTTGGCAGAAAAGTAAAAAGTGTAATGCTTTTTAGTTCATGTGACTTAAGTAATCTTTGGGAAATAAAAACAGTTGTACATGCCAGGTGTGTAAAAAAAGTGAAATGTATTTTTGGTAAAAGATTATAAGAAGTCATAGAAATATGGCTTTTTCTGCCTAGATTAA	20	PASS	ClusterIDs=HG3_PB_pbsv_7233:HG4_PB_SVrefine2PBcRDovetail_3688:HG4_PB_assemblyticsfalcon_23358:HG4_PB_SVrefine2Falcon1Dovetail_4536:HG4_Ill_SVrefine2DISCOVARDovetail_5550:HG3_PB_assemblyticsfalcon_23801:HG3_PB_SVrefine2PBcRDovetail_3397:HG3_PB_SVrefine2Falcon1Dovetail_4485:HG3_Ill_SVrefine2DISCOVARDovetail_5725:HG2_PB_assemblyticsfalcon_23962:HG2_PB_assemblyticsPBcR_23202:HG2_PB_SVrefine2PBcRplusDovetail_9856:HG2_PB_SVrefine2PB10Xhap12_5427:HG2_PB_SVrefine2Falcon2Bionano_3650:HG2_PB_SVrefine2Falcon1plusDovetail_10596:HG2_PB_PB10Xdip_24820:HG2_Ill_SVrefine2DISCOVARplusDovetail_11639:HG2_10X_SVrefine210Xhap12_5361:HG2_PB_pbsv_7472:HG4_Ill_MetaSV_4727:HG3_Ill_MetaSV_4697:HG2_Ill_MetaSV_4529:HG4_Ill_svaba_9769:HG3_Ill_svaba_9754:HG2_Ill_svaba_9672:HG4_PB_HySA_11057:HG4_PB_pbsv_7478;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5361:HG2_Ill_SVrefine2DISCOVARplusDovetail_11639:HG2_PB_PB10Xdip_24820:HG2_PB_SVrefine2Falcon1plusDovetail_10596:HG2_PB_SVrefine2Falcon2Bionano_3650:HG2_PB_SVrefine2PB10Xhap12_5427:HG2_PB_SVrefine2PBcRplusDovetail_9856:HG2_PB_assemblyticsPBcR_23202:HG2_PB_assemblyticsfalcon_23962:HG3_Ill_SVrefine2DISCOVARDovetail_5725:HG3_PB_SVrefine2Falcon1Dovetail_4485:HG3_PB_SVrefine2PBcRDovetail_3397:HG3_PB_assemblyticsfalcon_23801:HG4_Ill_SVrefine2DISCOVARDovetail_5550:HG4_PB_SVrefine2Falcon1Dovetail_4536:HG4_PB_assemblyticsfalcon_23358;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0389972;ClusterMaxSizeDiff=0.0332871;ClusterMaxEditDist=0.184573;PBcalls=17;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=12;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=351;DistBack=0;DistForward=-6;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:160656534-160656527;PctSeqSimilarity=0.9958;PctSizeSimilarity=0.9972;PctRecOverlap=0.9831;SizeDiff=1;StartDistance=1;EndDistance=6;GTMatch=0;TruScore=99;MatchId=4847.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:78:./.:0:6:0:1:./.:0:0:0:0:1/1:0:31:./.:2:36:.:.:.
chr6	160956237	HG4_Ill_SVrefine2DISCOVARDovetail_5553	A	ATAATGGTGATGATGGTGGTGGTGATGATAGTGATGGTGATGATGGTGGTAGTGGTAATGATATTGGTGATGGTGGTGGAATTGTGATGGTGGTGGTAGGCATAGTAATAGTGGTGATGATGGTGATTGTGATGATGGTGGTAGTGGTAATGATGATGGTAATGGTGGTGGTGATAGTGATGGTGATGATGGTGGTAGTGCTAATGATATTGGTGATGGTGTTGGGATGGTGTTGATGGTGATGGTGGTGGGTAGTAATGATGATCATGGTGACGGTGGTGGTGGTGATGATGGTGATGTTGGTAGTGGTAATGCTAATGGTGATGGTGGTAGTGGTAATGCTAATGGTGATGGTGGTGGTGGTAATGCTAATGGTGATGGTGGTGGAATTGTGATGGTGGTGGTAGGCATAGTAACGGTGATGATGGTGGTGGTGATGATGGTGATTGTGATGATGATGGTAGTGGTAATGATGATGGTGATGGTGGTGGAATGGTGTTGACGGTGATGGTGTTGGATAGTAATGATGATGATGGTGAGTGATGGTTCTGATGGTGATGTTGGTGATGTTGACAGTGAAGATGACAGTGTTAATGGTGATGGTGGTGGAATAGTGGTGATGGTGATATTAATGGTAGGGGTGGTAATGATGATGGTGGTGGTGATGATGGTGATGGGGTGGTAACGATAATGGTGACAGTGATGGAATGCTGATGATGGTGATGAAGACAGGTAGTAATGATGGTGACAGGGATGAGGATAGTGATGGTGGTGGTGGTGATGATGGTGATCGTGATAATGATACTGGTGTTGGTGGTGATGGTGGTTATGGTGATGGTGGTGGCAATGATAATGGTGGTGGTGATGATGGTGATATGGTTTGGCTCTGTGTCTCCACCCAAATCTCATGTCAAATTGTAATCCTCAATGTTGGAGAAGGGGCCTGGTGACAGGGTATTGAATCATGGAGGGAGGCTTCCCCTTTGCTTTTCTCATGATAGTGAGTGAATTATCATGAGATTTGGTTGTTTAAAGGTGTGCAGCACTTCCACTGCACTCTCTTTTTCCTGCTCCACCATGTGAAGATATAACCGCTTCCCCTTCACCTTCCACCACGATTGACAGTTTCCTGTTGCCTCCCCAGCCATGCTTCCTGTACAGCCTGTGGAACTGTGAGTCAATTCAACCTCTTTTCTTTATAAATTACCCAATCTCAGGTAGTCTCTATAGCAATGCAGGAATGGAC	20	PASS	ClusterIDs=HG2_PB_HySA_13846:HG2_PB_pbsv_7475:HG3_PB_pbsv_7236:HG4_PB_pbsv_7481:HG4_PB_HySA_11063:HG2_PB_HySA_13847:HG2_PB_assemblyticsfalcon_23965:HG2_PB_assemblyticsPBcR_23205:HG2_PB_PB10Xdip_24824:HG2_Ill_breakscan11_3777:HG4_PB_SVrefine2Falcon1Dovetail_4539:HG3_PB_SVrefine2Falcon1Dovetail_4488:HG2_Ill_MetaSV_4532:HG4_PB_SVrefine2PBcRDovetail_3691:HG4_Ill_SVrefine2DISCOVARDovetail_5553:HG4_Ill_MetaSV_4730:HG3_Ill_SVrefine2DISCOVARDovetail_5728:HG2_PB_SVrefine2Falcon1plusDovetail_10599:HG2_PB_SVrefine2PBcRplusDovetail_9859:HG2_PB_SVrefine2PB10Xhap12_5430:HG2_PB_SVrefine2Falcon2Bionano_3653:HG2_Ill_SVrefine2DISCOVARplusDovetail_11641:HG3_Ill_MetaSV_4700:HG4_PB_HySA_11062;NumClusterSVs=24;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_5728:HG4_Ill_MetaSV_4730:HG4_Ill_SVrefine2DISCOVARDovetail_5553:HG4_PB_SVrefine2PBcRDovetail_3691;NumExactMatchSVs=4;ClusterMaxShiftDist=0.15922;ClusterMaxSizeDiff=0.15922;ClusterMaxEditDist=0.212835;PBcalls=17;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=1245;DistBack=102;DistForward=18748;DistMin=102;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=71;REFWIDENED=6:160956238-160956308;PctSeqSimilarity=0.9996;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4848.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:122:1/1:1:44:0:13:./.:0:0:0:0:1/1:0:28:1/1:10:237:.:1320:.
chr6	161149367	HG2_Ill_GATKHC_12521	T	TAAGAGTCAATATCACTTCTCACCAAATTGATCTTTGGATTCAGCCCATACCCAATTGTTAAGGAAGAAATTACAAGATCTAAATAAAGATATATCATGTTTATATATTAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5367:HG3_PB_pbsv_7242:HG2_PB_HySA_13851:HG2_PB_pbsv_7478:HG4_Ill_svaba_9772:HG4_Ill_MetaSV_4732:HG4_Ill_GATKHC_12573:HG4_Ill_GATKHCSBGrefine_5307:HG3_Ill_svaba_9756:HG3_Ill_MetaSV_4702:HG3_Ill_GATKHC_12489:HG3_Ill_GATKHCSBGrefine_5175:HG3_Ill_250bpfermikitraw_10209:HG3_Ill_150bpfermikitraw_9935:HG2_Ill_svaba_9674:HG2_Ill_MetaSV_4534:HG2_Ill_GATKHC_12521:HG2_Ill_GATKHCSBGrefine_5227:HG3_PB_HySA_11462:HG4_PB_HySA_11069:HG4_PB_pbsv_7483:HG4_PB_SVrefine2PBcRDovetail_3693:HG4_PB_SVrefine2Falcon1Dovetail_4541:HG4_Ill_SVrefine2DISCOVARDovetail_5556:HG3_PB_SVrefine2PBcRDovetail_3402:HG3_Ill_SVrefine2DISCOVARDovetail_5733:HG2_PB_SVrefine2Falcon1plusDovetail_10602;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5227:HG2_Ill_GATKHC_12521:HG2_Ill_MetaSV_4534:HG2_Ill_svaba_9674:HG3_Ill_150bpfermikitraw_9935:HG3_Ill_250bpfermikitraw_10209:HG3_Ill_GATKHCSBGrefine_5175:HG3_Ill_GATKHC_12489:HG3_Ill_MetaSV_4702:HG3_Ill_svaba_9756:HG4_Ill_GATKHCSBGrefine_5307:HG4_Ill_GATKHC_12573:HG4_Ill_MetaSV_4732:HG4_Ill_svaba_9772;NumExactMatchSVs=14;ClusterMaxShiftDist=0.079646;ClusterMaxSizeDiff=0.0707965;ClusterMaxEditDist=0.330435;PBcalls=10;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=110;DistBack=-53;DistForward=50;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=109;REFWIDENED=6:161149313-161149421;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4849.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:41:0|1:33:1:1:29:./.:0:0:0:0:0/1:28:29:./.:.:.:.:.:.
chr6	161704190	HG3_Ill_SVrefine2DISCOVARDovetail_5740	A	AGCCTCCCAAGTAGCTGGGATTACAGGCGCTTGGCACCACGTGCAGCTAATTTTCGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCGTGAACTCCTGACCTCAAGTGATCCACCCACCTTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5376:HG3_PB_pbsv_7255:HG2_PB_PB10Xdip_24835:HG4_PB_pbsv_7487:HG2_PB_pbsv_7490:HG4_PB_HySA_11072:HG4_Ill_MetaSV_4734:HG4_Ill_GATKHCSBGrefine_5310:HG3_Ill_GATKHCSBGrefine_5181:HG2_Ill_manta_2192:HG2_Ill_MetaSV_4537:HG2_Ill_GATKHCSBGrefine_5234:HG2_Ill_250bpfermikitraw_10527:HG2_PB_HySA_13861:HG3_PB_HySA_11473:HG4_PB_SVrefine2Falcon1Dovetail_4543:HG4_Ill_SVrefine2DISCOVARDovetail_5561:HG3_PB_SVrefine2Falcon1Dovetail_4491:HG3_Ill_SVrefine2DISCOVARDovetail_5740:HG2_PB_SVrefine2PBcRplusDovetail_9866:HG2_PB_SVrefine2PB10Xhap12_5440:HG2_PB_SVrefine2Falcon2Bionano_3658:HG2_PB_SVrefine2Falcon1plusDovetail_10608:HG2_Ill_SVrefine2DISCOVARplusDovetail_11649;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5376:HG4_PB_SVrefine2Falcon1Dovetail_4543:HG4_Ill_SVrefine2DISCOVARDovetail_5561:HG3_PB_SVrefine2Falcon1Dovetail_4491:HG3_Ill_SVrefine2DISCOVARDovetail_5740:HG2_PB_SVrefine2PBcRplusDovetail_9866:HG2_PB_SVrefine2PB10Xhap12_5440:HG2_PB_SVrefine2Falcon2Bionano_3658:HG2_PB_SVrefine2Falcon1plusDovetail_10608:HG2_Ill_SVrefine2DISCOVARplusDovetail_11649;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0872727;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.283688;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=135;DistBack=17723;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=27;REFWIDENED=6:161704191-161704217;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=0.9111;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=96;MatchId=4850.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:0:14:1:16:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr6	161736993	HG2_Ill_svaba_9691	G	GTGTATATATATACATATATATATATATATGTATATATATACATATATATATATATATATA	20	PASS	ClusterIDs=HG4_Ill_manta_1891:HG4_PB_pbsv_7489:HG4_Ill_svaba_9775:HG4_Ill_scalpel_7264:HG4_Ill_GATKHCSBGrefine_5311:HG4_Ill_250bpfermikitraw_10512:HG4_Ill_150bpfermikitraw_10089:HG2_Ill_svaba_9691:HG4_PB_HySA_11073:HG2_PB_HySA_13862:HG4_Ill_scalpel_7265:HG4_Ill_GATKHC_12575:HG4_Ill_FB_6943:HG4_Ill_150bpfermikitraw_10090:HG2_Ill_GATKHC_12540:HG2_Ill_FB_6898;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_svaba_9691:HG4_Ill_150bpfermikitraw_10089:HG4_Ill_250bpfermikitraw_10512:HG4_Ill_GATKHCSBGrefine_5311:HG4_Ill_scalpel_7264:HG4_Ill_svaba_9775;NumExactMatchSVs=6;ClusterMaxShiftDist=0.259259;ClusterMaxSizeDiff=0.259259;ClusterMaxEditDist=0.303571;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=432;DistForward=34577;DistMin=432;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=31;REFWIDENED=6:161736975-161737005;PctSeqSimilarity=0.9183;PctSizeSimilarity=0.7333;PctRecOverlap=0.7377;SizeDiff=16;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=79;MatchId=4851.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:18:0|1:32:0:2:17:./.:0:0:0:0:0/1:29:10:./.:.:.:.:.:.
chr6	162181256	HG2_PB_SVrefine2Falcon2Bionano_3661	T	TGAAAACAATGCCGAGGAGCCAAGATGGCCGATAATGGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACCCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGCATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAGCAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATAAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAGAAAAAGAAAAAACTAAAAATATAAGCAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10612:HG2_PB_pbsv_7494:HG2_PB_PB10Xdip_24841:HG3_PB_pbsv_7258:HG2_PB_HySA_13871:HG2_PB_assemblyticsPBcR_23231:HG2_PB_HySA_13870:HG2_PB_SVrefine2PBcRplusDovetail_9869:HG2_PB_SVrefine2Falcon2Bionano_3661:HG3_PB_HySA_11477;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3661:HG2_PB_SVrefine2PBcRplusDovetail_9869;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0629769;ClusterMaxSizeDiff=0.0629769;ClusterMaxEditDist=0.200286;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=4014;DistBack=709;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=6:162181257-162181268;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4852.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:67:0|1:26:6:0:35:./.:0:0:0:0:0/1:25:10:0/1:147:534:.:4004:.
chr6	162372018	HG2_PB_SVrefine2PBcRplusDovetail_9871	G	GAAAGACACGTTTTAGAAAGACACGTGTCTTTTTAGAAAGATCACGGGGTGGCGTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTGGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGCGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGGGGAGCCCCTCTGCCCGGCCAGACGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCGGGAGGGAGGTGGGGGGGTCATCCCCCCACCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGAGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGTCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGAAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTTCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGACAGCCCCCCGCCCAGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGTCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTCTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAATAAATAAATTTAAAAAAAAATTAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_pbsv_7497:HG2_PB_PB10Xdip_24843:HG2_PB_SVrefine2Falcon1plusDovetail_10614:HG2_PB_assemblyticsPBcR_23235:HG2_PB_pbsv_7498:HG2_PB_SVrefine2PBcRplusDovetail_9871:HG4_PB_SVrefine2PBcRDovetail_3700:HG2_PB_SVrefine2PB10Xhap12_5447:HG2_PB_HySA_13876;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9871;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0319834;ClusterMaxSizeDiff=0.0319834;ClusterMaxEditDist=0.150237;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=2399;DistBack=4571;DistForward=59215;DistMin=4571;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=6:162372019-162372023;PctSeqSimilarity=0.999;PctSizeSimilarity=0.9979;PctRecOverlap=0.9975;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4853.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:42:1|0:4:32:24:0:./.:0:0:0:0:0/1:27:11:0/1:87:259:.:2463:.
chr6	162610278	HG2_Ill_GATKHCSBGrefine_5243	T	TTATCTTCTATAGGAGGGAATTGAGATTAGACAACTGCAAAGTTGATTCCTATTCTAAG	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_5243:HG4_PB_pbsv_7500:HG4_PB_HySA_11086:HG4_Ill_GATKHC_12589:HG4_Ill_GATKHCSBGrefine_5317:HG4_Ill_150bpfermikitraw_10100:HG2_Ill_GATKHC_12555;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5243:HG4_Ill_GATKHC_12589:HG4_Ill_GATKHCSBGrefine_5317:HG4_Ill_150bpfermikitraw_10100:HG2_Ill_GATKHC_12555;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0813008;ClusterMaxSizeDiff=0.0813008;ClusterMaxEditDist=0.178862;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=1;DistForward=37;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=467;REFWIDENED=6:162609985-162610451;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4854.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:0|1:32:4:3:21:./.:0:0:0:0:./.:20:2:./.:.:.:.:.:.
chr6	163692324	HG4_Ill_GATKHC_12609	C	CGACTCAAATGTTTATCTCCTTTGGCAACACCCTCACAAACACACCCAGATTGAGGGTGGGTCTGCCTCTCCCAGCCCACT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5394:HG2_PB_HySA_13892:HG2_PB_pbsv_7507:HG2_PB_PB10Xdip_24850:HG3_PB_pbsv_7265:HG4_PB_HySA_11100:HG4_PB_pbsv_7506:HG2_PB_HySA_13891:HG4_Ill_svaba_9801:HG4_Ill_Krunchall_11188:HG4_Ill_GATKHC_12609:HG4_Ill_GATKHCSBGrefine_5325:HG4_Ill_250bpfermikitraw_10536:HG3_Ill_svaba_9788:HG3_Ill_scalpel_7561:HG3_Ill_Krunchall_10586:HG3_Ill_GATKHC_12529:HG3_Ill_GATKHCSBGrefine_5189:HG3_Ill_250bpfermikitraw_10245:HG3_Ill_150bpfermikitraw_9969:HG2_Ill_svaba_9709:HG2_Ill_scalpel_7447:HG2_Ill_Krunchall_10862:HG2_Ill_GATKHC_12565:HG2_Ill_GATKHCSBGrefine_5247:HG2_Ill_250bpfermikitraw_10545:HG2_Ill_150bpfermikitraw_9935:HG3_PB_HySA_11493:HG2_Ill_breakscan11_3781:HG4_PB_SVrefine2PBcRDovetail_3705:HG3_PB_SVrefine2PBcRDovetail_3408:HG3_PB_SVrefine2Falcon1Dovetail_4498:HG3_Ill_SVrefine2DISCOVARDovetail_5752:HG2_PB_SVrefine2PBcRplusDovetail_9877:HG2_PB_SVrefine2PB10Xhap12_5453:HG2_PB_SVrefine2Falcon2Bionano_3665:HG2_PB_SVrefine2Falcon1plusDovetail_10619:HG2_Ill_SVrefine2DISCOVARplusDovetail_11661;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9935:HG2_Ill_250bpfermikitraw_10545:HG2_Ill_GATKHCSBGrefine_5247:HG2_Ill_GATKHC_12565:HG2_Ill_Krunchall_10862:HG2_Ill_scalpel_7447:HG2_Ill_svaba_9709:HG3_Ill_150bpfermikitraw_9969:HG3_Ill_250bpfermikitraw_10245:HG3_Ill_GATKHCSBGrefine_5189:HG3_Ill_GATKHC_12529:HG3_Ill_Krunchall_10586:HG3_Ill_scalpel_7561:HG3_Ill_svaba_9788:HG4_Ill_250bpfermikitraw_10536:HG4_Ill_GATKHCSBGrefine_5325:HG4_Ill_GATKHC_12609:HG4_Ill_Krunchall_11188:HG4_Ill_svaba_9801;NumExactMatchSVs=19;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.0858896;ClusterMaxEditDist=0.287425;PBcalls=15;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=80;DistBack=-40;DistForward=10386;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=82;REFWIDENED=6:163692288-163692369;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4855.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:55:1/1:5:31:3:21:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr6	164161905	HG3_PB_SVrefine2Falcon1Dovetail_4503	AATATA	TTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCC	20	PASS	ClusterIDs=HG3_PB_pbsv_7272:HG2_PB_SVrefine2Falcon2Bionano_3670:HG2_PB_HySA_13911:HG3_PB_HySA_11507:HG4_PB_pbsv_7514:HG3_Ill_SVrefine2DISCOVARDovetail_5756:HG3_PB_SVrefine2PBcRDovetail_3413:HG2_PB_SVrefine2Falcon1plusDovetail_10624:HG3_PB_assemblyticsfalcon_23842:HG3_PB_SVrefine2Falcon1Dovetail_4503:HG4_PB_assemblyticsfalcon_23397:HG4_PB_SVrefine2Falcon1Dovetail_4560:HG2_PB_PB10Xdip_24856;NumClusterSVs=13;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_4503:HG3_PB_assemblyticsfalcon_23842;NumExactMatchSVs=2;ClusterMaxShiftDist=0.212121;ClusterMaxSizeDiff=0.212121;ClusterMaxEditDist=0.360976;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=93;DistBack=0;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:164161911-164161904;PctSeqSimilarity=0.9795;PctSizeSimilarity=0.9789;PctRecOverlap=0.9592;SizeDiff=-2;StartDistance=-5;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4856.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:31:./.:11:9:2:17:./.:0:0:0:0:0/1:27:8:./.:.:.:.:.:.
chr6	165186930	HG2_Ill_MetaSV_4543	T	TCCCAAAAGCCTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTATTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG	20	PASS	ClusterIDs=HG4_PB_HySA_11119:HG4_PB_pbsv_7520:HG2_PB_pbsv_7520:HG4_PB_SVrefine2PBcRDovetail_3709:HG4_PB_assemblyticsfalcon_23412:HG2_PB_SVrefine2PB10Xhap12_5460:HG2_PB_PB10Xdip_24862:HG4_Ill_MetaSV_4744:HG4_Ill_GATKHCSBGrefine_5334:HG2_Ill_manta_2199:HG2_Ill_MetaSV_4543:HG2_Ill_GATKHCSBGrefine_5255:HG4_PB_SVrefine2Falcon1Dovetail_4564;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5255:HG2_Ill_MetaSV_4543:HG2_Ill_manta_2199:HG4_Ill_GATKHCSBGrefine_5334:HG4_Ill_MetaSV_4744;NumExactMatchSVs=5;ClusterMaxShiftDist=0.163993;ClusterMaxSizeDiff=0.160428;ClusterMaxEditDist=0.193202;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=290;DistBack=17605;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:165186931-165186945;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4857.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:68:1|0:3:50:33:1:./.:0:0:0:0:0/1:17:15:./.:.:.:.:.:.
chr6	166032414	HG2_PB_SVrefine2Falcon2Bionano_3673	C	CGTGTAGTCTAGTGTAGTCTAGTGTAGTGCAGTGTAGACTAGTGTAGTGTAGTCTAGTGTAGTGTAGTCTAGTGTAGTGTAGTCTAGTGTAGTCTAGCATAGTCTAGTGTAGTGTAGTGTAGTCTAGTGTGGTGTAGTGTAGTGTAGTGTAGTCTAGTGTAGTCTAGTGTAGTGTAGTCTAGTGTAGTGTAGTCTAGCATAGTCTAGTGTAGTGTAGTCTAGTGTCGTGTAGTGTAGTGTAGTGTAGTCTAGTGTAGTGTAGTCTAGTGTAGTGTAATGTAGTGCAGTGTAGACTAGTGTAGTGTAGACTAGTGTGGTGTAGTGTAGTCTAGTGTAGTGTAGTCTAGCGTAGTGTAGTCTAGCATAGTCTAGTGTAGTGTAGTGTAGTCTAGTGTGGTGTAGTGTAGTGTAGTGTAGTCTAGTGTAGTGTAGTCTAGTGTAGTGTGGTGTAGTGTAGTCTAGTATAGTGTAGTGTAGTGTAGTCTAGTGTAGTGTAGTGTAGGCTAGTGTAGGCTAGTGTAGTGTAGTAGTGTAGTCTAGTATAGTGTAGTATAGTCTAGTGTACTGTAGTGTAGTATAGTGTAGTCTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4512:HG2_Ill_GATKHCSBGrefine_5257:HG2_PB_pbsv_7522:HG2_Ill_breakscan11_3782:HG3_PB_pbsv_7279:HG2_PB_PB10Xdip_24866:HG2_PB_SVrefine2Falcon1plusDovetail_10629:HG4_PB_SVrefine2Falcon1Dovetail_4567:HG4_Ill_SVrefine2DISCOVARDovetail_5580:HG2_PB_SVrefine2PBcRplusDovetail_9887:HG2_PB_SVrefine2PB10Xhap12_5463:HG2_PB_SVrefine2Falcon2Bionano_3673:HG2_Ill_SVrefine2DISCOVARplusDovetail_11672:HG3_PB_SVrefine2PBcRDovetail_3417;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11672:HG2_PB_SVrefine2Falcon2Bionano_3673:HG2_PB_SVrefine2PB10Xhap12_5463:HG2_PB_SVrefine2PBcRplusDovetail_9887;NumExactMatchSVs=4;ClusterMaxShiftDist=0.218644;ClusterMaxSizeDiff=0.216949;ClusterMaxEditDist=0.379661;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=588;DistBack=38092;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=607;REFWIDENED=6:166032415-166033021;PctSeqSimilarity=0.9641;PctSizeSimilarity=0.9949;PctRecOverlap=0.1591;SizeDiff=-3;StartDistance=-496;EndDistance=-496;GTMatch=0;TruScore=70;MatchId=4859.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:94:1/1:1:29:0:11:./.:0:0:0:0:./.:0:0:1/1:1:26:.:.:.
chr6	166091495	HG2_10X_SVrefine210Xhap12_5405	G	GTGTTTGTGTATGTGTAGCTGTTTGTGTGGGTGTTTGTATATGTGTGTGTTTGTGTATGTGTGTTTGTATAGCTATGTGTGTGTATTAATATGTGTATGTATTTCTGTGGGTGTGTTTGTGTTTGTGTACGTGTGTATGTGTGTGTCTCTCTGTGTGTATGTATGTGTGTGTCCATGTGTGTCTGTGTATATGTTTATGTTTGTGTGTCTGTGTGTTTGTATATCCGTGTGTCTCTATGTGTATATATGTGTATCTGTGTATGTGTGTGTGTCTCTGTGTGTATATGTGTCTTTGTGTGTCTGTGTGTCTCTCTTTGTGTGTGTGTATTATCCATATGTGTCTGTGTATGAGTGGGTGTATGTCTGTGTGTGTGTGTCTGTGTATGTGTGTGTCTCTGTACATCTTTGTGTGTGTTTGTGTATCCCTGTGTGTGTGTTTGCGTGTGTCTCTCTCTGTGTGTATGTGTCTCTC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_5762:HG2_PB_pbsv_7523:HG4_PB_HySA_11124:HG3_PB_assemblyticsfalcon_23866:HG3_PB_SVrefine2Falcon1Dovetail_4513:HG4_Ill_MetaSV_4747:HG3_PB_pbsv_7280:HG4_Ill_GATKHCSBGrefine_5336:HG4_PB_pbsv_7524:HG2_Ill_manta_2202:HG2_Ill_MetaSV_4545:HG3_Ill_MetaSV_4713:HG3_Ill_GATKHCSBGrefine_5198:HG4_PB_HySA_11123:HG2_PB_PB10Xdip_24867:HG4_PB_SVrefine2Falcon1Dovetail_4568:HG4_PB_SVrefine2PBcRDovetail_3712:HG4_Ill_SVrefine2DISCOVARDovetail_5581:HG2_PB_SVrefine2PBcRplusDovetail_9888:HG2_PB_SVrefine2PB10Xhap12_5464:HG2_PB_SVrefine2Falcon2Bionano_3674:HG2_PB_SVrefine2Falcon1plusDovetail_10630:HG2_Ill_SVrefine2DISCOVARplusDovetail_11673:HG2_10X_SVrefine210Xhap12_5405:HG3_PB_SVrefine2PBcRDovetail_3418;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5405:HG2_Ill_SVrefine2DISCOVARplusDovetail_11673:HG2_PB_SVrefine2Falcon1plusDovetail_10630:HG2_PB_SVrefine2Falcon2Bionano_3674:HG2_PB_SVrefine2PB10Xhap12_5464:HG2_PB_SVrefine2PBcRplusDovetail_9888:HG4_Ill_SVrefine2DISCOVARDovetail_5581:HG4_PB_SVrefine2PBcRDovetail_3712;NumExactMatchSVs=8;ClusterMaxShiftDist=0.15015;ClusterMaxSizeDiff=0.15015;ClusterMaxEditDist=0.260786;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=471;DistBack=72;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=285;REFWIDENED=6:166091496-166091780;PctSeqSimilarity=0.9597;PctSizeSimilarity=0.9752;PctRecOverlap=0.6149;SizeDiff=-12;StartDistance=-180;EndDistance=-180;GTMatch=1;TruScore=84;MatchId=4860.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:72:1/1:1:17:2:31:./.:0:0:0:0:1/1:0:24:1/1:2:80:.:.:.
chr6	166162641	HG2_PB_SVrefine2PB10Xhap12_5465	G	GCTATCACCATCATCACCACCATTAACACTATCACAATCACCACCATCACCATCACCATCATCACCATCACCAATACCACCATCACTACCATCACCATCACCACCACCATTATCACCATCACCATCATCACCATCACCACCATCACCACCATCAACACCATCATCACCATGACCACCATCATCACCATCATCACCATTGCCACCATCATCACCACCACCATTATTACCATCACCATCATCACCATCACCACCATCCCCATCACCACCATCACATCACCATCATCAACACCATCAACACCATCATCACCATCACCACCATCACATCACCATCAACACCATCACCACCATCATCACCATCACCACCATCACATCACCATCATCAACACCATCACCACCATCACATCACCATCAACAACACCATCAACACCATCACCATCA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4546:HG4_PB_pbsv_7525:HG3_PB_pbsv_7281:HG2_PB_pbsv_7524:HG4_PB_HySA_11126:HG2_PB_HySA_13933:HG4_PB_HySA_11125:HG4_Ill_manta_1900:HG4_Ill_GATKHCSBGrefine_5337:HG3_Ill_GATKHCSBGrefine_5199:HG4_Ill_MetaSV_4748:HG2_PB_PB10Xdip_24868:HG2_Ill_breakscan11_3783:HG3_PB_SVrefine2Falcon1Dovetail_4514:HG4_PB_SVrefine2Falcon1Dovetail_4569:HG3_PB_SVrefine2PBcRDovetail_3419:HG3_Ill_SVrefine2DISCOVARDovetail_5763:HG2_PB_SVrefine2PBcRplusDovetail_9889:HG2_PB_SVrefine2PB10Xhap12_5465:HG2_PB_SVrefine2Falcon2Bionano_3675:HG2_PB_SVrefine2Falcon1plusDovetail_10631:HG2_Ill_SVrefine2DISCOVARplusDovetail_11674:HG4_PB_SVrefine2PBcRDovetail_3713:HG4_Ill_SVrefine2DISCOVARDovetail_5582;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11674:HG2_PB_SVrefine2Falcon1plusDovetail_10631:HG2_PB_SVrefine2Falcon2Bionano_3675:HG2_PB_SVrefine2PB10Xhap12_5465:HG2_PB_SVrefine2PBcRplusDovetail_9889:HG3_Ill_SVrefine2DISCOVARDovetail_5763:HG3_PB_SVrefine2PBcRDovetail_3419;NumExactMatchSVs=7;ClusterMaxShiftDist=0.10245;ClusterMaxSizeDiff=0.0535714;ClusterMaxEditDist=0.211236;PBcalls=15;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=437;DistBack=39528;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=369;REFWIDENED=6:166162642-166163010;PctSeqSimilarity=0.9936;PctSizeSimilarity=1;PctRecOverlap=0.9336;SizeDiff=0;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=97;MatchId=4861.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:96:1/1:1:14:1:15:./.:0:0:0:0:1/1:0:20:1/1:1:90:.:.:.
chr6	166279892	HG2_Ill_breakscan11_3784	T	CAGTAATGAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3784:HG2_PB_pbsv_7527:HG3_PB_HySA_11532:HG3_PB_pbsv_7284:HG4_PB_SVrefine2PBcRDovetail_3716:HG4_PB_pbsv_7528:HG4_PB_assemblyticsfalcon_23430:HG3_PB_assemblyticsfalcon_23872:HG4_PB_SVrefine2Falcon1Dovetail_4572:HG3_PB_SVrefine2PBcRDovetail_3422:HG3_PB_SVrefine2Falcon1Dovetail_4517:HG2_PB_SVrefine2PBcRplusDovetail_9892:HG2_PB_SVrefine2PB10Xhap12_5469:HG2_10X_SVrefine210Xhap12_5410:HG2_PB_SVrefine2Falcon2Bionano_3678:HG2_PB_SVrefine2Falcon1plusDovetail_10634:HG4_PB_HySA_11129:HG2_PB_HySA_13936:HG2_PB_PB10Xdip_24872;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_breakscan11_3784:HG2_PB_PB10Xdip_24872;NumExactMatchSVs=2;ClusterMaxShiftDist=0.153619;ClusterMaxSizeDiff=0.153619;ClusterMaxEditDist=0.282857;PBcalls=17;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=330;DistBack=11391;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=6:166279893-166279891;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4862.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:0:16:0:17:./.:0:0:0:0:1/1:0:21:./.:5:66:.:.:.
chr6	166444493	HG4_PB_HySA_11135	T	TAATATCATATATTATAATTATATTATTATATATGATATATCATATAATATAATATATTATAATATATGATATATTATATATATAATATATTTATTATATATGATATATTATTATATTATAATATATTATTATATTATTATTATATATATATATTTATATTATATTATATATTATAATATATATTATAATATATTATATATTATTAATATATTATATATTATAATATATATTATAAATATATAATATATATTTATATATAATAATATATTATAATATATATATATAATATATAATATATCATATATAATAATATATTATAATATATAATATATCATATATTATAATATATTATAATATATTATATATTATATATATATTATATATTATAATAATATTATATATTATATATTATATTATATAATATATTATAATATTATATATATATACATATATAATATATTAATATTATTATATATTATTACATAATATAATATATTATTATTATTATAATATATTATCTAGTATATATGTTATAATATATTTATATATATATATTAATAATATATTTATATATATATATATTATATTATATAATATATTTATATTATATATTATATAATATATTATAATATATTATATAATATATTATATAATATATTATAATATGTTATATATTATTATATTATATATTATAATATATTATATGTTATATATTATATATTATAATATATTATATATTATATATATTATAATATATTATTATATGATATATTTATAATATATTATATATTATATATTATAATATATTATATATTATATATATTATATATATATATATACATAATATATAATATATTAAATATATAGTATATAATATATTTAATGTATGTTATATATTTTATATATAATATATTATTAATATATAAATATAATAAATATATTTATTAACATATGAATATATTATAGAGCTATATAATATATTTATGTTATATATGATAGAAATACATAATATATAATATTTATTATATTTATATTATGTATAAATATATTGTGTTCTCTATTTATGATATATTTAAATATATTTATATCATCATATGTCATGTTATATACATAAAAATATATAATATATTTTATATAAATATGTATGTATAATATATAATAATTATATATA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4521:HG3_PB_HySA_11538:HG4_PB_HySA_11136:HG2_PB_PB10Xdip_24878:HG4_PB_HySA_11135:HG4_PB_SVrefine2PBcRDovetail_3721:HG4_PB_SVrefine2Falcon1Dovetail_4576:HG3_PB_pbsv_7289:HG2_PB_pbsv_7532:HG3_PB_SVrefine2PBcRDovetail_3427:HG2_PB_SVrefine2Falcon2Bionano_3682:HG2_PB_SVrefine2PB10Xhap12_5473:HG2_PB_SVrefine2PBcRplusDovetail_9896:HG2_PB_SVrefine2Falcon1plusDovetail_10638;NumClusterSVs=14;ExactMatchIDs=HG4_PB_HySA_11135;NumExactMatchSVs=1;ClusterMaxShiftDist=0.288066;ClusterMaxSizeDiff=0.288066;ClusterMaxEditDist=0.31575;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1171;DistBack=40;DistForward=18962;DistMin=40;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=6:166444494-166444494;PctSeqSimilarity=0.8984;PctSizeSimilarity=0.8335;PctRecOverlap=0.8335;SizeDiff=-234;StartDistance=25;EndDistance=25;GTMatch=1;TruScore=85;MatchId=4863.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:10:93:1/1:1:18:0:14:./.:0:0:0:0:1/1:0:29:1/1:10:197:.:.:.
chr6	166829313	HG2_PB_SVrefine2PBcRplusDovetail_9899	G	GCCACCACCTCCACCATCACCCTTACCATCATTCCTCCATCACCCCCACCATAATCTTCACCATCACCTCCACAATCATCCTCACCATCCTTCCTCCATCACCCCCACCATTACCCTCACCACAATCACCTTCACCATCATCTTCACCATCTCCACCATCATCCTCACCATCCTCCTCCATCACCCCCACCATTACGCTCACCATCATCTTCACCACCTCCACCATCATCCTCACCATCTCCACCATCACCCTCACCATCCTTCCTCCATCACCTCCACCATCCACCCTCACCATCCTTCATCACCCCCACCATCACCCTCACCATCATCTTCACCACCACCTCCACCATCACCCTCGCCATCCTTTCTCCATCACCTCCACCATCACCCTCACCATCATCTTCACCACCACCTCCACCATCACCCTCGCCATCCTTTCTCCATCACCTCCACCATCACCCTCGCCATCATCTTCACCACCACCTCCACCATCATCCTCACCATCTCCACCATCACCCTCGCCATCCTTTCTCCATCACCTCCACCATCACCCTCGCCATCATCTTCA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4525:HG4_PB_HySA_11140:HG3_PB_pbsv_7294:HG2_PB_HySA_13944:HG2_PB_pbsv_7537:HG3_PB_HySA_11543:HG2_PB_PB10Xdip_24902:HG2_PB_SVrefine2Falcon1plusDovetail_10643:HG4_PB_SVrefine2PBcRDovetail_3725:HG3_PB_SVrefine2PBcRDovetail_3430:HG2_PB_SVrefine2PBcRplusDovetail_9899:HG2_PB_SVrefine2PB10Xhap12_5480:HG2_PB_SVrefine2Falcon2Bionano_3687:HG4_PB_SVrefine2Falcon1Dovetail_4580;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3687:HG2_PB_SVrefine2PB10Xhap12_5480:HG2_PB_SVrefine2PBcRplusDovetail_9899:HG3_PB_SVrefine2PBcRDovetail_3430:HG4_PB_SVrefine2PBcRDovetail_3725;NumExactMatchSVs=5;ClusterMaxShiftDist=0.127469;ClusterMaxSizeDiff=0.125673;ClusterMaxEditDist=0.283088;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=567;DistBack=13284;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=551;REFWIDENED=6:166829314-166829864;PctSeqSimilarity=0.9583;PctSizeSimilarity=0.993;PctRecOverlap=0.4606;SizeDiff=-4;StartDistance=-306;EndDistance=-306;GTMatch=0;TruScore=80;MatchId=4864.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:78:./.:0:1:0:0:./.:0:0:0:0:./.:0:5:./.:4:67:.:.:.
chr6	167124797	HG3_Ill_MetaSV_4716	T	TAAGATCCAGAGTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3432:HG2_Ill_MetaSV_4550:HG3_PB_pbsv_7296:HG4_PB_pbsv_7546:HG3_PB_assemblyticsfalcon_23887:HG4_PB_assemblyticsfalcon_23443:HG2_PB_pbsv_7539:HG2_PB_SVrefine2PBcRplusDovetail_9900:HG4_PB_SVrefine2PBcRDovetail_3726:HG4_Ill_manta_1902:HG4_Ill_GATKHCSBGrefine_5345:HG3_Ill_MetaSV_4716:HG3_Ill_GATKHCSBGrefine_5206:HG2_Ill_GATKHCSBGrefine_5264:HG4_Ill_MetaSV_4750:HG3_PB_SVrefine2Falcon1Dovetail_4526:HG4_PB_SVrefine2Falcon1Dovetail_4581:HG2_PB_SVrefine2PB10Xhap12_5483:HG2_PB_HySA_13947:HG3_PB_HySA_11544:HG2_PB_PB10Xdip_24904;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5264:HG3_Ill_GATKHCSBGrefine_5206:HG3_Ill_MetaSV_4716:HG4_Ill_GATKHCSBGrefine_5345:HG4_Ill_manta_1902;NumExactMatchSVs=5;ClusterMaxShiftDist=0.241436;ClusterMaxSizeDiff=0.238173;ClusterMaxEditDist=0.261011;PBcalls=14;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=15552;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=6:167124798-167124812;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4865.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:55:0|1:26:0:0:43:./.:0:0:0:0:0/1:24:12:0/1:5:23:.:.:.
chr6	167253169	HG2_PB_pbsv_7541	A	AAAGGAAGAGGGAGGGGAGGGGAGGGAGGGGAGGGGAGGAGGGGAGGGAGGGAGGGAGGGGAGGAGGGAGGGGAAGGGGAGGGGAGAGAGGAG	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_24905:HG4_PB_assemblyticsfalcon_23448:HG4_PB_SVrefine2Falcon1Dovetail_4585:HG3_PB_SVrefine2PBcRDovetail_3433:HG3_PB_HySA_11546:HG4_PB_HySA_11149:HG2_PB_HySA_13949:HG3_PB_pbsv_7297:HG3_PB_SVrefine2Falcon1Dovetail_4531:HG2_PB_pbsv_7541:HG4_PB_pbsv_7547;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_7541;NumExactMatchSVs=1;ClusterMaxShiftDist=0.291892;ClusterMaxSizeDiff=0.291892;ClusterMaxEditDist=0.313514;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=92;DistBack=-34;DistForward=0;DistMin=-34;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=6:167253170-167253169;PctSeqSimilarity=0.9179;PctSizeSimilarity=0.9293;PctRecOverlap=0.9394;SizeDiff=-7;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=92;MatchId=4866.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:2:29:0:26:./.:0:0:0:0:./.:2:1:./.:.:.:.:.:.
chr6	167411097	HG2_PB_SVrefine2PB10Xhap12_5484	G	GTACATACCCACAGACAGAAACACAGAGACATGTTTGGAAGCCAGTGTGGATGCCCTGTGATCTGTGTGTACACATGACAAGTGCATACACACGCACATAAAGGAACCCAGAGACGTGTTTGGAAGCCAGTGTGGACACCCTGTGATCTGTGCGTACACATTTGACACCTGCGTACACACTCACAGACAGAAACACAGAGATGTGTTTGGAAGCCAGCGTGGATGCCCTGTGATCTCTGCATACACGTGACACATGCATGCACAGGCCCATACAGGAGCAGAGAGACACATTTGGAAGCCGATGTACGCCCTGTGATCTGTGCGTACACGTGACACATGCGTACACACCCACTGACAAGAACACAGAGACGTGTTTGGAAGCCAGTGTGGACGCCCTGTAATCTGTGTGTACACACGTGACACATGCGTGCACACCCACTGACAAGAACAGAGACCCATTTGGAAGCCAGTGTGGGTGCCCTGTGATCTGATCTGTGTGTACACATGTGACACGTGCATCCACACCCACTGACAAGCACACAAGAGACACATTTGAAAGCCAGTGTGGATGCCTTGTGATCTGTGTGTACACATGTGACATGGGCATATGCACCTACAGACAGAAACGCAGAGATGCATTTGGAAGTCACTGTGGATACCTTGTCATCTGTGTGTACACATGAGACACTTGCATACACACCCACATACAGGAACACAGAGACACGTTTGGAAGCCAGTGTGGATGTCCTGTGATCTGTGTGCACACGTTACACGTGTACACAACCACTGACAAGAACATGGAGACACATTTGGAAGCTAGTGTGGACGCCCTGTAATCTGTGCATACACATGTGATACGTGTGTGCACACCCACTGACAAGAACATGGAGACCCATTTGGAAGGCAGTGTGGATGCCCTGTGATCTGTGTGCACACATGTGACACGTGCATGCACATCCACAGACAGAAACACAGAGACACGTTTGGAAGGCAGTGTGGATGCCCTGTGATCTGTGTGTATACGTGACACATGCATGCAAACCCACTGACAAGAACACATAGATGCATTTGGAAGCCAGTGTGGACGCCATGTGATCTGTGCCCACATATCACATGGCCGCTTTGGGATAGGGCCTGTCTGCCCATACTGGCTTCCAAACGCCTCTGTGTGTTCCTGTATGTGGGTGTGCACGTACCTGTCACATGTGTATGCACAGACCACAGGATGTCCACACTGGCTTCCAAATGCGTCTCTGTGTTCCTGTCTGTGAGTTCCAAATGTGTGCACACCTACAGACAGGAACATGGAAACACATTTGGAAGCCAGTGTGGACACCCTGTGATCTGTGCGTACACATGTGACACGTGCATGCACACCCACAGACAGGAACACAGAGACACATTTGGAAGCCAGTGTGGACGCCCTGTGATCTGTGCCCACACACATCACACGTGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10648:HG3_PB_assemblyticsfalcon_23897:HG4_PB_pbsv_7550:HG2_PB_pbsv_7543:HG2_PB_PB10Xdip_24906:HG2_PB_HySA_13952:HG2_PB_SVrefine2Falcon1plusDovetail_10649:HG3_PB_SVrefine2Falcon1Dovetail_4532:HG2_Ill_breakscan11_3785:HG3_PB_HySA_11549:HG3_Ill_SVrefine2DISCOVARDovetail_5776:HG2_PB_SVrefine2PB10Xhap12_5484:HG2_Ill_SVrefine2DISCOVARplusDovetail_11683;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11683:HG2_PB_SVrefine2PB10Xhap12_5484:HG3_Ill_SVrefine2DISCOVARDovetail_5776;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0588629;ClusterMaxSizeDiff=0.0575251;ClusterMaxEditDist=0.153344;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=1456;DistBack=27747;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=301;REFWIDENED=6:167411098-167411398;PctSeqSimilarity=0.9922;PctSizeSimilarity=0.9986;PctRecOverlap=0.8593;SizeDiff=2;StartDistance=-204;EndDistance=-204;GTMatch=0;TruScore=95;MatchId=4867.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:115:0|1:38:0:0:45:./.:0:0:0:0:0/1:15:8:0/1:38:150:.:1443:.
chr6	167684561	HG2_PB_SVrefine2Falcon2Bionano_3691	G	GGCACCTGGGAGTCATTAGGCAGCAAGGGAGGGAATTGCGATTCTGGGCGGGGCTCAGCTGTGCAGATTTTAGCAAGGTCTCCAGGTGCTTCTGCTGAGGGCCAGAGTTAAGACAGAGCTTAAGACAGAGAACCTCAACAGGAGGCCTGAAGGAAA	20	PASS	ClusterIDs=HG4_PB_HySA_11158:HG4_PB_HySA_11160:HG2_PB_pbsv_7549:HG4_PB_HySA_11159:HG2_PB_HySA_13958:HG4_PB_pbsv_7553:HG4_PB_assemblyticsfalcon_23456:HG4_PB_SVrefine2Falcon1Dovetail_4587:HG2_10X_SVrefine210Xhap12_5429:HG3_PB_SVrefine2Falcon1Dovetail_4534:HG2_PB_SVrefine2Falcon2Bionano_3691;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3691:HG3_PB_SVrefine2Falcon1Dovetail_4534;NumExactMatchSVs=2;ClusterMaxShiftDist=0.075;ClusterMaxSizeDiff=0.075;ClusterMaxEditDist=0.280374;PBcalls=10;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=155;DistBack=14462;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=303;REFWIDENED=6:167684562-167684864;PctSeqSimilarity=0.9974;PctSizeSimilarity=1;PctRecOverlap=0.7484;SizeDiff=0;StartDistance=-39;EndDistance=-39;GTMatch=0;TruScore=91;MatchId=4869.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:19:./.:18:9:15:6:./.:0:0:0:0:0/1:10:5:./.:.:.:.:.:.
chr6	167816292	HG2_PB_SVrefine2Falcon2Bionano_3693	C	CTGCGTGTTATGCGTGAGCCTGAGGCTGTGTGTTATGTGTGAGCCTGAGGCTGTGTGTTATGTGTGAGCCTGAGGTTGTGTGTTATGTGTGAGTCTGAGGTTGTGTGTTATGTGTGAGCCTGAGGT	10	PASS	ClusterIDs=HG4_PB_pbsv_7558:HG2_PB_SVrefine2Falcon2Bionano_3693:HG2_PB_pbsv_7556:HG3_PB_assemblyticsfalcon_23907;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3693;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.217228;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=125;DistBack=172;DistForward=36;DistMin=36;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=373;REFWIDENED=6:167816081-167816453;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=0.824;SizeDiff=0;StartDistance=22;EndDistance=22;GTMatch=0;TruScore=93;MatchId=4870.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:38:0|1:40:2:2:35:./.:0:0:0:0:0/1:16:6:./.:.:.:.:3674:.
chr6	168052511	HG2_Ill_SVrefine2DISCOVARplusDovetail_11687	T	TGTATATGGAGTATGAGTGTATGTGTGGTGTGTGTGTGGTATGAGTGTGTGTGGTGTATGTGTGTGTGGTGTGTGTGTGGTGTGTGTGTGGTGTATGTGTGTGTATGTGTGAGTGTATGTGGTGTGTGAATGTGTGTGTTGTGTGTGCCCTTGTGTATGTGGAGTGTGTGTGTGTTTGGTGTGTGTACGTGTGTGAATGTGTGTGGTGCATGTGTGTATGTGTGTGCAGTGTGTGTGTGGTGTATGTCTGTATGTATGTGTGTGAGTGTATGTGGTGCGGGTGTGTGTGCATGTGTATGGAGTATGTATGAATGTGTGTGTGGTGTGTGTGATATAAGTGTGTGTGTGGTGTATGTGAGTTTGTGTGGTATGTGTGGTGTATGTGTGAGTGTATGTGTTGTGTGAGTGTATGTGCATGTGTATGGAGTATGTATGAGTGCGTGTGTGTGTGGTGTGTGCGTATGTGGTGTGTGTGCATGTATATGGAGTATGAGTGTATGTGTGGTGTGTGTGTGGTATGAGTGTGTGTGGTGTGTGTGGTGTATGAGTGTGTGCATGTGTGAGTGTATGTGGTGTGTGAATGTGTGTGTTGTGTGTGCCCTTGTGTATGCGGAGTGTGTGTGTATGCGTGTGTTTGGTGTGTGCACGTGTGAATGTGTGTGGTGCATGTGTATGTGAGTGTGTGCAGTGTGTGTGGTGTATGTCTGTGTGTGAGTGTATGTGGTGTGTGTGTGCATGTGTATGTAGTATGAGTGTGCGGTGTGTGTGATATGAGTGTGTGTGTGGTGTATGTGTGTGGTATGAGTGTGTGTGAGTGTGTGATGTGTGTGGTGGGTATGTGCATGTGTATGTAGTATGAGTGCGTGTGCAGTGTGAGTGACATGAGTGTGTGTGTGGTGTATGTGTGTGGTATGAGTGTGTGTGAGTGTGGTGTGTGTATGTGGTGGGTGAATGTGTATGTGCATATGTATGGAGTATGTATGAGTGCGTGTATGGTGTGTGTGGTATGAGTGTGTGGTGTGTGTGTGGTATGAGTGTGTGGTGTGTGTCAGTGTATGTGGTGTGTGTGCATGTGTATGGAGTATATATGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4539:HG4_PB_assemblyticsfalcon_23465:HG2_PB_pbsv_7563:HG4_PB_SVrefine2Falcon1Dovetail_4593:HG2_PB_assemblyticsfalcon_24071:HG3_PB_assemblyticsfalcon_23911:HG2_PB_SVrefine2PBcRplusDovetail_9907:HG4_PB_SVrefine2PBcRDovetail_3729:HG3_Ill_SVrefine2DISCOVARDovetail_5782:HG2_Ill_SVrefine2DISCOVARplusDovetail_11687:HG2_PB_SVrefine2PB10Xhap12_5494:HG2_PB_SVrefine2Falcon1plusDovetail_10657:HG2_PB_SVrefine2Falcon2Bionano_3696;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11687:HG3_Ill_SVrefine2DISCOVARDovetail_5782:HG4_PB_SVrefine2PBcRDovetail_3729;NumExactMatchSVs=3;ClusterMaxShiftDist=0.250828;ClusterMaxSizeDiff=0.250828;ClusterMaxEditDist=0.321817;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=1090;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=87;REFWIDENED=6:168052512-168052598;PctSeqSimilarity=0.9941;PctSizeSimilarity=0.9882;PctRecOverlap=0.9891;SizeDiff=-13;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4871.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:127:1/1:2:36:0:24:./.:0:0:0:0:./.:0:2:1/1:5:212:.:.:.
chr6	168087486	HG3_PB_SVrefine2PBcRDovetail_3438	T	TGTGTGTGTGCATGTGTGTATATTTGTGTGTGTATACATTTGTGTATGTGTATTTGTGTGATTGCATGAGCATATGTGTGAGCATGTGTATGAGGGTGTGTGTGCTTGTGTGTATATTTGTGTGTGCATGTGTATATATTTGTGTGTTTGTGCACATTTGTGTGAATTTGTGTGTATATTCACGTGCATGTGTGTATACATTTGTGTGTTTGTATACATTTTGGGGTATATTTGTATGTCATTGCATGAGCACATGTGTGAGCATGTGTATGTGGGTGTGTGTGCATGTGTGTGTACATTTGTGTGTGCATGTGTATATATATTTGTGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5436:HG3_PB_HySA_11584:HG3_PB_pbsv_7316:HG4_Ill_manta_1905:HG4_PB_pbsv_7566:HG2_PB_HySA_13982:HG4_Ill_GATKHCSBGrefine_5355:HG2_Ill_MetaSV_4553:HG4_Ill_MetaSV_4757:HG3_Ill_MetaSV_4719:HG3_Ill_GATKHCSBGrefine_5212:HG2_Ill_manta_2212:HG2_Ill_GATKHCSBGrefine_5270:HG2_PB_SVrefine2Falcon2Bionano_3697:HG2_PB_PB10Xdip_24931:HG2_PB_pbsv_7565:HG2_Ill_SVrefine2DISCOVARplusDovetail_11688:HG4_PB_SVrefine2PBcRDovetail_3731:HG4_PB_SVrefine2Falcon1Dovetail_4595:HG4_Ill_SVrefine2DISCOVARDovetail_5595:HG3_PB_SVrefine2PBcRDovetail_3438:HG3_PB_SVrefine2Falcon1Dovetail_4540:HG3_Ill_SVrefine2DISCOVARDovetail_5783:HG2_PB_SVrefine2PBcRplusDovetail_9908:HG2_PB_SVrefine2PB10Xhap12_5495:HG2_PB_SVrefine2Falcon1plusDovetail_10658;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5436:HG4_PB_SVrefine2PBcRDovetail_3731:HG4_PB_SVrefine2Falcon1Dovetail_4595:HG4_Ill_SVrefine2DISCOVARDovetail_5595:HG3_PB_SVrefine2PBcRDovetail_3438:HG3_PB_SVrefine2Falcon1Dovetail_4540:HG3_Ill_SVrefine2DISCOVARDovetail_5783:HG2_PB_SVrefine2PBcRplusDovetail_9908:HG2_PB_SVrefine2PB10Xhap12_5495:HG2_PB_SVrefine2Falcon1plusDovetail_10658;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0651163;ClusterMaxSizeDiff=0.0651163;ClusterMaxEditDist=0.253049;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=328;DistBack=116;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=209;REFWIDENED=6:168087487-168087695;PctSeqSimilarity=0.958;PctSizeSimilarity=0.9482;PctRecOverlap=0.4286;SizeDiff=17;StartDistance=-179;EndDistance=-179;GTMatch=0;TruScore=77;MatchId=4872.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:75:1/1:1:32:0:14:./.:0:0:0:0:1/1:0:15:1/1:1:39:.:.:.
chr6	168110349	HG3_PB_SVrefine2Falcon1Dovetail_4542	G	GTGAACCAGCCTGGCATCACCCATCACACCTCACAGCCTGTGAACCAACCTGGCATCACCCATCACACTCCACAGCCTGGCATCACCCATCACACCCCACAGCCTA	10	PASS	ClusterIDs=HG3_PB_HySA_11586:HG2_PB_pbsv_7567:HG4_PB_assemblyticsfalcon_23472:HG2_PB_HySA_13984:HG3_PB_assemblyticsfalcon_23918:HG3_PB_pbsv_7318:HG2_PB_assemblyticsfalcon_24075:HG4_PB_SVrefine2Falcon1Dovetail_4597:HG3_PB_SVrefine2PBcRDovetail_3439:HG3_PB_SVrefine2Falcon1Dovetail_4542:HG2_PB_SVrefine2Falcon1plusDovetail_10660;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10660:HG3_PB_SVrefine2Falcon1Dovetail_4542:HG3_PB_SVrefine2PBcRDovetail_3439;NumExactMatchSVs=3;ClusterMaxShiftDist=0.135922;ClusterMaxSizeDiff=0.135922;ClusterMaxEditDist=0.252427;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=105;DistBack=-236;DistForward=81;DistMin=-236;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=482;REFWIDENED=6:168110207-168110688;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4873.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:62:./.:23:15:5:35:./.:0:0:0:0:./.:6:0:./.:.:.:.:.:.
chr6	168430176	HG3_PB_SVrefine2Falcon1Dovetail_4552	A	ACTGGCCTTCCCAGCTGACATGGACCTCAGGTCAGCTTCAGCGTGAGAAGCAGGCCAGGCCTGGGTCTGGAGCCGTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11693:HG2_PB_pbsv_7575:HG3_Ill_250bpfermikitraw_10313:HG3_PB_pbsv_7332:HG4_PB_SVrefine2PBcRDovetail_3737:HG4_PB_SVrefine2Falcon1Dovetail_4605:HG3_PB_SVrefine2PBcRDovetail_3444:HG3_PB_SVrefine2Falcon1Dovetail_4552:HG3_Ill_SVrefine2DISCOVARDovetail_5786:HG2_PB_SVrefine2PB10Xhap12_5504:HG2_PB_SVrefine2Falcon1plusDovetail_10670;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11693:HG4_PB_SVrefine2PBcRDovetail_3737:HG4_PB_SVrefine2Falcon1Dovetail_4605:HG3_PB_SVrefine2PBcRDovetail_3444:HG3_PB_SVrefine2Falcon1Dovetail_4552:HG3_Ill_SVrefine2DISCOVARDovetail_5786:HG2_PB_SVrefine2PB10Xhap12_5504:HG2_PB_SVrefine2Falcon1plusDovetail_10670;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0636943;ClusterMaxSizeDiff=0.0382166;ClusterMaxEditDist=0.27673;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=76;DistBack=5072;DistForward=34;DistMin=34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=226;REFWIDENED=6:168430177-168430402;PctSeqSimilarity=0.9945;PctSizeSimilarity=1;PctRecOverlap=0.8182;SizeDiff=0;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=93;MatchId=4874.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:35:0|1:20:5:1:18:./.:0:0:0:0:0/1:31:9:./.:.:.:.:.:.
chr6	168520648	HG3_PB_SVrefine2PBcRDovetail_3448	T	TTCACCACCATCTTCACTATTACTATCATCACCACCGTCACCATCATATTCACCATCACCATCATCACCACCATCTTCACTGTTACCATCTTCATCATCATCACCATCACCATGATATTCAGCATCACCACCATCACCATCATCATCTTCACCACCATCTTCGCTGTCACCATCATTATCACCACCATCACCATCATATTCTCATATTTGACATCACCATCATCACCACCATCATCTTCAACCTCCATCCTTACCACCATCATCTTCAACCTCCATCCTTACCACCATCATCTTCAACATCACACTCATCATCTCCATCATCTTTACCACCATCTTCACTATCACCATCATCATCATCATCCTGATCACCATCATCACCACCATCATCTTCACCACCATCTTCACTGTCACCATTATCATCAACCTCATCACCATCACCATCATCTTCAACATCCATCACCACCATCACCAGCATCACCATCATCATCACCATCATCTTCAACACCATCTTTATCACCATCTTCACTATCACTGTCATCATCATCATGATCACCGCCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3448:HG4_PB_HySA_11204:HG2_PB_PB10Xdip_24949:HG2_PB_pbsv_7583:HG2_Ill_breakscan11_3788:HG2_PB_HySA_14010:HG4_PB_HySA_11202:HG3_PB_HySA_11614:HG3_Ill_MetaSV_4721:HG3_Ill_GATKHCSBGrefine_5219:HG2_Ill_GATKHCSBGrefine_5277:HG3_Ill_manta_1804:HG4_Ill_MetaSV_4759:HG4_Ill_GATKHCSBGrefine_5361:HG2_Ill_MetaSV_4554:HG3_PB_pbsv_7340:HG3_PB_SVrefine2Falcon1Dovetail_4556:HG4_PB_pbsv_7586:HG2_PB_SVrefine2PBcRplusDovetail_9919:HG2_PB_SVrefine2PB10Xhap12_5509:HG3_Ill_SVrefine2DISCOVARDovetail_5790:HG2_PB_SVrefine2Falcon2Bionano_3708:HG2_PB_SVrefine2Falcon1plusDovetail_10676:HG2_Ill_SVrefine2DISCOVARplusDovetail_11697:HG4_PB_SVrefine2PBcRDovetail_3740:HG4_PB_SVrefine2Falcon1Dovetail_4610:HG4_Ill_SVrefine2DISCOVARDovetail_5602;NumClusterSVs=27;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_3448:HG4_PB_SVrefine2PBcRDovetail_3740:HG4_PB_SVrefine2Falcon1Dovetail_4610:HG4_Ill_SVrefine2DISCOVARDovetail_5602;NumExactMatchSVs=4;ClusterMaxShiftDist=0.18395;ClusterMaxSizeDiff=0.178539;ClusterMaxEditDist=0.283871;PBcalls=16;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=557;DistBack=4415;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=492;REFWIDENED=6:168520260-168520751;PctSeqSimilarity=0.9914;PctSizeSimilarity=0.9982;PctRecOverlap=0.9515;SizeDiff=1;StartDistance=-27;EndDistance=-27;GTMatch=0;TruScore=98;MatchId=4876.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:97:1/1:1:41:2:27:./.:0:0:0:0:1/1:0:26:1/1:3:98:.:.:.
chr6	168639743	HG2_Ill_GATKHCSBGrefine_5279	G	GAATGCAAAGAGACAGAGTGGACAGTCCCTTCCGATACGCAAGTCAGGTAAATGCAAAGAGACAGCGTGGACAGTCCCTTCAGACATGTTAGCCAGGTA	20	PASS	ClusterIDs=HG3_PB_pbsv_7347:HG2_PB_SVrefine2Falcon2Bionano_3712:HG2_PB_SVrefine2Falcon1plusDovetail_10678:HG2_10X_SVrefine210Xhap12_5451:HG4_Ill_svaba_9883:HG4_Ill_Krunchall_11257:HG4_Ill_250bpfermikitraw_10624:HG4_Ill_150bpfermikitraw_10191:HG3_Ill_svaba_9856:HG2_Ill_svaba_9786:HG4_PB_pbsv_7589:HG3_Ill_GATKHC_12616:HG2_PB_pbsv_7588:HG3_Ill_GATKHCSBGrefine_5222:HG3_Ill_250bpfermikitraw_10323:HG3_Ill_150bpfermikitraw_10038:HG2_Ill_Krunchall_10924:HG2_Ill_GATKHC_12642:HG2_Ill_GATKHCSBGrefine_5279:HG2_Ill_250bpfermikitraw_10620:HG2_Ill_150bpfermikitraw_9998:HG4_PB_HySA_11214;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9998:HG2_Ill_250bpfermikitraw_10620:HG2_Ill_GATKHCSBGrefine_5279:HG2_Ill_GATKHC_12642:HG2_Ill_Krunchall_10924:HG3_Ill_150bpfermikitraw_10038:HG3_Ill_250bpfermikitraw_10323:HG3_Ill_GATKHCSBGrefine_5222:HG3_Ill_GATKHC_12616;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0788177;ClusterMaxSizeDiff=0.0492611;ClusterMaxEditDist=0.270531;PBcalls=6;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=98;DistBack=1082;DistForward=39;DistMin=39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=105;REFWIDENED=6:168639744-168639848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4878.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:22:0|1:19:3:0:18:./.:0:0:0:0:0/1:15:11:./.:.:.:.:3005:.
chr6	168670937	HG2_PB_SVrefine2Falcon2Bionano_3714	T	TACATAATATGCCACACCCCACACACCATATACACACACTACACACATACACACCACACTACACACACCACACCATACACACACCATATACACATAATACACCACACCCCACACATCATATACACACACCACACACAGCATACACATCACACCATACACACCATACACCACACACACAACATATACACACACCACAAACATAATACACAACCCACACGTCACACTCCTC	20	PASS	ClusterIDs=HG2_PB_pbsv_7590:HG2_PB_PB10Xdip_24952:HG3_PB_pbsv_7349:HG2_PB_HySA_14011:HG2_PB_assemblyticsfalcon_24099:HG4_PB_assemblyticsfalcon_23498:HG3_PB_assemblyticsfalcon_23940:HG2_Ill_breakscan11_3789:HG4_PB_SVrefine2PBcRDovetail_3742:HG4_Ill_manta_1907:HG4_Ill_SVrefine2DISCOVARDovetail_5608:HG4_Ill_GATKHCSBGrefine_5365:HG4_Ill_Cortex_3325:HG3_PB_SVrefine2PBcRDovetail_3451:HG3_Ill_manta_1806:HG3_Ill_SVrefine2DISCOVARDovetail_5792:HG3_Ill_MetaSV_4722:HG3_Ill_GATKHCSBGrefine_5223:HG3_Ill_Cortex_3344:HG2_PB_SVrefine2PBcRplusDovetail_9921:HG2_PB_SVrefine2PB10Xhap12_5511:HG2_PB_SVrefine2Falcon2Bionano_3714:HG2_Ill_manta_2215:HG2_Ill_SVrefine2DISCOVARplusDovetail_11700:HG2_Ill_MetaSV_4555:HG2_Ill_GATKHCSBGrefine_5280:HG2_Ill_Cortex_8108:HG4_PB_SVrefine2Falcon1Dovetail_4612:HG3_PB_SVrefine2Falcon1Dovetail_4558:HG2_PB_SVrefine2Falcon1plusDovetail_10680;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_Cortex_8108:HG2_Ill_GATKHCSBGrefine_5280:HG2_Ill_MetaSV_4555:HG2_Ill_SVrefine2DISCOVARplusDovetail_11700:HG2_Ill_manta_2215:HG2_PB_SVrefine2Falcon2Bionano_3714:HG2_PB_SVrefine2PB10Xhap12_5511:HG2_PB_SVrefine2PBcRplusDovetail_9921:HG3_Ill_Cortex_3344:HG3_Ill_GATKHCSBGrefine_5223:HG3_Ill_MetaSV_4722:HG3_Ill_SVrefine2DISCOVARDovetail_5792:HG3_Ill_manta_1806:HG3_PB_SVrefine2PBcRDovetail_3451:HG4_Ill_Cortex_3325:HG4_Ill_GATKHCSBGrefine_5365:HG4_Ill_SVrefine2DISCOVARDovetail_5608:HG4_Ill_manta_1907:HG4_PB_SVrefine2PBcRDovetail_3742;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0608696;ClusterMaxEditDist=0.265823;PBcalls=15;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=228;DistBack=11;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=6:168670938-168670940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4880.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:61:1/1:2:17:1:18:./.:0:0:0:0:1/1:0:11:./.:.:.:.:.:.
chr6	168696787	HG2_PB_assemblyticsfalcon_24104	G	GGATCCATCCACAGCGGTGAGGAGATGGTCATGGAGGTCATGGAGGACAGACACCCGGAATCACGGAAAGAGCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_24954:HG3_PB_pbsv_7351:HG3_PB_HySA_11618:HG4_PB_pbsv_7593:HG2_PB_HySA_14016:HG2_PB_pbsv_7593:HG4_PB_assemblyticsfalcon_23502:HG3_PB_assemblyticsfalcon_23943:HG3_Ill_250bpfermikitraw_10326:HG2_PB_assemblyticsfalcon_24104:HG2_Ill_250bpfermikitraw_10624;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10624:HG2_PB_assemblyticsfalcon_24104:HG3_Ill_250bpfermikitraw_10326:HG3_PB_assemblyticsfalcon_23943:HG4_PB_assemblyticsfalcon_23502;NumExactMatchSVs=5;ClusterMaxShiftDist=0.103896;ClusterMaxSizeDiff=0.103896;ClusterMaxEditDist=0.314465;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=73;DistBack=-1;DistForward=72;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=297;REFWIDENED=6:168696641-168696937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4881.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:1/1:2:24:1:19:./.:0:0:0:0:./.:3:0:./.:.:.:.:.:.
chr6	168990255	HG2_PB_SVrefine2PBcRplusDovetail_9931	C	CTGTGGCATTAGTTTAGGGAGAAGCCAGCCTGGTGGTGGTCAGGTGTGGCATTAGTTTAGGGGGCAGCCGGTCTGGTGGTGGTCAGGTGTGGCATTAGTTTAGGGGGCAGCCGGTCTGGTGGTGGTCAGGTGTGGCATTAGTTTAGGGGGCAGCCGGCCTGGTGTTGGTCAGGTGTGGCATTAGTTTAGGGGGCAGCCCCAGCCTGGTGGTGGTCAGGTGTGGCATTAGTTTATGGGGCAGCCGGCCTGGTGGTGGTCAGGTGTGGCATTAGTTTAGGGAGCAGCCGGTCTGGTGGTGGTCAGGTGTGGCATTAGTTTAGGGGGCAGCCGGTCTGGTGGTGGTCAGGTGTGGCATTAGTTTAGGGGGCAGCCGGCCTGGTGTTGGTCAGGTGTGGCATTAGTTTAGGGGGCAGCCCCAGCCTGGTGGTGGTCAGGTGTGGCATTAGTTTACGGGGCAGCCGGCCTGGTGGTGGTCAGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4624:HG4_PB_HySA_11244:HG2_PB_SVrefine2Falcon1plusDovetail_10691:HG4_PB_SVrefine2PBcRDovetail_3752:HG2_PB_SVrefine2PBcRplusDovetail_9931:HG2_PB_SVrefine2PB10Xhap12_5524;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9931:HG4_PB_SVrefine2PBcRDovetail_3752;NumExactMatchSVs=2;ClusterMaxShiftDist=0.101099;ClusterMaxSizeDiff=0.101099;ClusterMaxEditDist=0.170306;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=477;DistBack=-6417;DistForward=154;DistMin=-6417;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=498;REFWIDENED=6:168990256-168990753;PctSeqSimilarity=0.9839;PctSizeSimilarity=1;PctRecOverlap=0.3145;SizeDiff=0;StartDistance=-327;EndDistance=-327;GTMatch=0;TruScore=76;MatchId=4882.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:32:0|1:33:2:4:19:./.:0:0:0:0:./.:3:1:./.:3:6:.:6690:.
chr6	169025333	HG2_Ill_GATKHCSBGrefine_5283	G	GACACAGACGCACACACACACTGACATAAACACACATAGATACAGATGTACACGGACACACAGACACAGACACACAGACACAGTACAGATTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25024:HG4_PB_pbsv_7616:HG2_PB_HySA_14046:HG2_PB_pbsv_7611:HG4_Ill_GATKHC_12722:HG4_PB_HySA_11265:HG4_Ill_GATKHCSBGrefine_5371:HG4_Ill_250bpfermikitraw_10636:HG2_Ill_GATKHC_12658:HG2_Ill_GATKHCSBGrefine_5283:HG2_Ill_250bpfermikitraw_10632;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10632:HG2_Ill_GATKHCSBGrefine_5283:HG2_Ill_GATKHC_12658:HG4_Ill_250bpfermikitraw_10636:HG4_Ill_GATKHCSBGrefine_5371:HG4_Ill_GATKHC_12722;NumExactMatchSVs=6;ClusterMaxShiftDist=0.149733;ClusterMaxSizeDiff=0.139037;ClusterMaxEditDist=0.262626;PBcalls=5;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=91;DistBack=159;DistForward=77;DistMin=77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=81;REFWIDENED=6:169025332-169025415;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4883.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:33:./.:9:26:23:4:./.:0:0:0:0:0/1:25:9:./.:.:.:.:6690:.
chr6	169219880	HG2_Ill_GATKHCSBGrefine_5286	C	CATTCCTTCCAGCCAGTCGTCATTTGCCTGCATTGGCGTTCCTTCCAGCCAGTCGTCATTTGTCTGCATTGGT	20	PASS	ClusterIDs=HG3_PB_pbsv_7373:HG4_Ill_Krunchall_11266:HG3_PB_assemblyticsfalcon_23963:HG2_PB_assemblyticsfalcon_24127:HG4_Ill_GATKHC_12726:HG4_Ill_GATKHCSBGrefine_5375:HG4_Ill_250bpfermikitraw_10637:HG3_Ill_Krunchall_10657:HG3_Ill_GATKHC_12636:HG3_Ill_GATKHCSBGrefine_5228:HG3_Ill_250bpfermikitraw_10334:HG3_Ill_150bpfermikitraw_10046:HG2_Ill_Krunchall_10934:HG2_Ill_GATKHC_12661:HG2_Ill_GATKHCSBGrefine_5286:HG2_Ill_250bpfermikitraw_10634:HG2_Ill_150bpfermikitraw_10006:HG2_PB_PB10Xdip_25036:HG2_PB_pbsv_7618;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10006:HG2_Ill_250bpfermikitraw_10634:HG2_Ill_GATKHCSBGrefine_5286:HG2_Ill_GATKHC_12661:HG2_Ill_Krunchall_10934:HG3_Ill_150bpfermikitraw_10046:HG3_Ill_250bpfermikitraw_10334:HG3_Ill_GATKHCSBGrefine_5228:HG3_Ill_GATKHC_12636:HG3_Ill_Krunchall_10657:HG4_Ill_250bpfermikitraw_10637:HG4_Ill_GATKHCSBGrefine_5375:HG4_Ill_GATKHC_12726:HG4_Ill_Krunchall_11266;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0675676;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.28;PBcalls=5;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=16;DistForward=48;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=6:169219879-169219881;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4885.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:48:0|1:39:1:2:44:./.:0:0:0:0:0/1:34:23:./.:.:.:.:.:.
chr6	169225844	HG2_PB_SVrefine2Falcon1plusDovetail_10698	G	GGGGGACGGAGCGTGGGGGGGACCGCGTGCACGAGGCGGGGACAGAGGGTCGGGGGGACCGCGTGCACGAGGCGGGGACAGAGGGTCGGGTGGACGCGTGCACGAGGCAGGGATGGAGCCTGGGGCGGGGGACGCGTGCACGAGGCGGGGACGGAGCGTGGGGGACCGCGAGCACGAGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10698:HG2_PB_pbsv_7620:HG2_PB_SVrefine2PB10Xhap12_5535:HG2_PB_SVrefine2Falcon2Bionano_3727;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10698;NumExactMatchSVs=1;ClusterMaxShiftDist=0.027933;ClusterMaxSizeDiff=0.0278552;ClusterMaxEditDist=0.0886427;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=179;DistBack=2591;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=361;REFWIDENED=6:169225845-169226205;PctSeqSimilarity=0.9586;PctSizeSimilarity=0.9777;PctRecOverlap=0.4972;SizeDiff=4;StartDistance=-88;EndDistance=-88;GTMatch=0;TruScore=81;MatchId=4886.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:47:0|1:32:3:2:37:./.:0:0:0:0:./.:4:3:./.:.:.:.:.:.
chr6	169250151	HG2_Ill_GATKHC_12665	A	AAGAGGTGGCATGGGCCTTGTGGGCAGAGGTGGCACGGGCCTTGTGGGAAGAGGTGGCACGGGCCTTGTGGGC	20	PASS	ClusterIDs=HG3_PB_pbsv_7380:HG4_PB_pbsv_7624:HG2_PB_PB10Xdip_25056:HG3_Ill_GATKHC_12640:HG2_Ill_GATKHC_12665:HG2_PB_pbsv_7624;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHC_12665:HG3_Ill_GATKHC_12640;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.198675;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=-1;DistForward=373;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=743;REFWIDENED=6:169249954-169250696;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4888.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:9:32:1/1:4:15:1:6:./.:0:0:0:0:./.:1:2:./.:.:.:.:2931:.
chr6	169266610	HG4_PB_SVrefine2Falcon1Dovetail_4635	C	CTGGTGCAGGCCCCTCGACTGAGCACTTAGCTTGGTGCAGGCCCCTCGGCTGAGTACTTAGCTTTGTGCAGGCCCATTGGGTGAGCACTGAGCTTAGTGCAGGCCCCTCGGCTGAGTACCTAGCTTGGTGCAGGCCCCTCAGCTGAGCACTGAGCTTGGTGCAGGCCCATTGGGTGAGCACTGAGCTTGGTGCAGGCCCTCGGCTGCGTACTTAGCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10702:HG2_PB_PB10Xdip_25057:HG3_PB_pbsv_7381:HG4_PB_pbsv_7626:HG4_PB_SVrefine2PBcRDovetail_3758:HG4_PB_SVrefine2Falcon1Dovetail_4635:HG4_Ill_SVrefine2DISCOVARDovetail_5617:HG3_PB_SVrefine2PBcRDovetail_3465:HG3_PB_SVrefine2Falcon1Dovetail_4574:HG3_Ill_SVrefine2DISCOVARDovetail_5803:HG2_PB_SVrefine2PBcRplusDovetail_9944:HG2_PB_SVrefine2PB10Xhap12_5539:HG2_PB_SVrefine2Falcon2Bionano_3731:HG2_Ill_SVrefine2DISCOVARplusDovetail_11714;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11714:HG2_PB_SVrefine2Falcon2Bionano_3731:HG2_PB_SVrefine2PB10Xhap12_5539:HG2_PB_SVrefine2PBcRplusDovetail_9944:HG3_Ill_SVrefine2DISCOVARDovetail_5803:HG3_PB_SVrefine2Falcon1Dovetail_4574:HG3_PB_SVrefine2PBcRDovetail_3465:HG4_Ill_SVrefine2DISCOVARDovetail_5617:HG4_PB_SVrefine2Falcon1Dovetail_4635:HG4_PB_SVrefine2PBcRDovetail_3758;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0758929;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.28246;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=216;DistBack=9864;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=455;REFWIDENED=6:169266611-169267065;PctSeqSimilarity=0.9629;PctSizeSimilarity=0.9954;PctRecOverlap=0.0783;SizeDiff=-1;StartDistance=-200;EndDistance=-200;GTMatch=0;TruScore=67;MatchId=4889.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:0:24:1:14:./.:0:0:0:0:./.:3:0:./.:.:.:.:.:.
chr6	169271811	HG4_PB_assemblyticsfalcon_23538	G	GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	20	PASS	ClusterIDs=HG3_PB_pbsv_7382:HG3_PB_HySA_11671:HG2_PB_pbsv_7626:HG3_PB_assemblyticsfalcon_23972:HG4_PB_assemblyticsfalcon_23538:HG2_PB_assemblyticsfalcon_24138:HG2_PB_PB10Xdip_25058:HG4_PB_pbsv_7627:HG2_Ill_GATKHC_12669;NumClusterSVs=9;ExactMatchIDs=HG4_PB_assemblyticsfalcon_23538;NumExactMatchSVs=1;ClusterMaxShiftDist=0.233333;ClusterMaxSizeDiff=0.233333;ClusterMaxEditDist=0.244275;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=4868;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=6:169271812-169271831;PctSeqSimilarity=0.8833;PctSizeSimilarity=0.7879;PctRecOverlap=0.791;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=82;MatchId=4890.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:1/1:4:20:0:18:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr6	169334828	HG3_Ill_250bpfermikitraw_10347	G	GAGGCGAGGCAGGCGAGACGTGAGGCGAGGCAGGGGAGACGTGAGGCGAGGC	20	PASS	ClusterIDs=HG3_PB_pbsv_7387:HG4_Ill_manta_1910:HG2_PB_assemblyticsfalcon_24149:HG4_Ill_svaba_9912:HG2_PB_pbsv_7629:HG3_Ill_svaba_9884:HG2_Ill_svaba_9814:HG4_PB_pbsv_7631:HG4_PB_assemblyticsfalcon_23549:HG4_Ill_svaba_9911:HG3_Ill_svaba_9883:HG2_Ill_svaba_9813:HG4_Ill_Krunchall_11272:HG4_Ill_GATKHC_12737:HG4_Ill_GATKHCSBGrefine_5377:HG4_Ill_250bpfermikitraw_10644:HG4_Ill_150bpfermikitraw_10208:HG3_Ill_manta_1809:HG3_Ill_Spiral_8336:HG3_Ill_Krunchall_10662:HG3_Ill_GATKHC_12650:HG3_Ill_GATKHCSBGrefine_5231:HG3_Ill_250bpfermikitraw_10347:HG3_Ill_150bpfermikitraw_10056:HG2_Ill_manta_2219:HG2_Ill_SpiralSDKrefine_15390:HG2_Ill_Krunchall_10942:HG2_Ill_GATKHC_12682:HG2_Ill_GATKHCSBGrefine_5303:HG2_Ill_250bpfermikitraw_10644:HG2_Ill_150bpfermikitraw_10014:HG2_PB_PB10Xdip_25066;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10014:HG2_Ill_250bpfermikitraw_10644:HG2_Ill_GATKHCSBGrefine_5303:HG2_Ill_GATKHC_12682:HG2_Ill_Krunchall_10942:HG2_Ill_SpiralSDKrefine_15390:HG2_Ill_manta_2219:HG3_Ill_150bpfermikitraw_10056:HG3_Ill_250bpfermikitraw_10347:HG3_Ill_GATKHCSBGrefine_5231:HG3_Ill_GATKHC_12650:HG3_Ill_Krunchall_10662:HG3_Ill_Spiral_8336:HG3_Ill_manta_1809:HG4_Ill_150bpfermikitraw_10208:HG4_Ill_250bpfermikitraw_10644:HG4_Ill_GATKHCSBGrefine_5377:HG4_Ill_GATKHC_12737:HG4_Ill_Krunchall_11272:HG4_Ill_manta_1910;NumExactMatchSVs=20;ClusterMaxShiftDist=0.205607;ClusterMaxSizeDiff=0.205607;ClusterMaxEditDist=0.345455;PBcalls=6;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=1934;DistForward=27;DistMin=27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=6:169334829-169334856;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4891.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:63:1/1:4:30:4:21:./.:0:0:0:0:1/1:0:54:./.:.:.:.:2284:.
chr6	169913744	HG2_Ill_250bpfermikitraw_10662	A	ATGTGTTTATTTATAAGTAATTACTTATAAACAATGTGTTTATTTATAAGTACTTATAAACAATGTGTTTATTTATAAGTAATTACTTATAAACAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3770:HG4_PB_pbsv_7651:HG4_PB_HySA_11313:HG4_Ill_GATKHCSBGrefine_5392:HG4_Ill_250bpfermikitraw_10665:HG3_Ill_Krunchall_10672:HG3_Ill_GATKHC_12667:HG3_Ill_GATKHCSBGrefine_5242:HG3_Ill_250bpfermikitraw_10356:HG2_Ill_Krunchall_10955:HG2_Ill_GATKHC_12710:HG2_Ill_GATKHCSBGrefine_5316:HG2_Ill_250bpfermikitraw_10662:HG3_PB_pbsv_7402:HG2_PB_HySA_14081:HG2_PB_pbsv_7647:HG2_PB_PB10Xdip_25075:HG4_Ill_SVrefine2DISCOVARDovetail_5627:HG3_Ill_SVrefine2DISCOVARDovetail_5813:HG2_PB_SVrefine2PBcRplusDovetail_9953:HG2_PB_SVrefine2PB10Xhap12_5552:HG2_PB_SVrefine2Falcon2Bionano_3741:HG4_PB_SVrefine2Falcon1Dovetail_4650:HG3_PB_SVrefine2PBcRDovetail_3476:HG3_PB_SVrefine2Falcon1Dovetail_4589:HG2_PB_SVrefine2Falcon1plusDovetail_10715:HG2_Ill_SVrefine2DISCOVARplusDovetail_11724;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10662:HG2_Ill_GATKHCSBGrefine_5316:HG2_Ill_GATKHC_12710:HG2_Ill_Krunchall_10955:HG3_Ill_250bpfermikitraw_10356:HG3_Ill_GATKHCSBGrefine_5242:HG3_Ill_GATKHC_12667:HG3_Ill_Krunchall_10672:HG4_Ill_250bpfermikitraw_10665:HG4_Ill_GATKHCSBGrefine_5392;NumExactMatchSVs=10;ClusterMaxShiftDist=0.10101;ClusterMaxSizeDiff=0.0904523;ClusterMaxEditDist=0.27451;PBcalls=14;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=95;DistBack=-48;DistForward=32;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=118;REFWIDENED=6:169913726-169913843;PctSeqSimilarity=0.9786;PctSizeSimilarity=0.9596;PctRecOverlap=0.7879;SizeDiff=-4;StartDistance=19;EndDistance=19;GTMatch=0;TruScore=90;MatchId=4892.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:82:1/1:3:43:3:33:./.:0:0:0:0:0/1:10:68:./.:.:.:.:.:.
chr6	170207368	HG2_PB_SVrefine2PB10Xhap12_5554	T	GACACAGAGCTCACCCACAGACCCCACCAGAGCTCACCACAGACACAGAGCTCTCCACATACACAGAGCTCACCACAGACACAGAGCTCACCACAGACACAGAGCTCTCCACA	10	PASS	ClusterIDs=HG4_PB_pbsv_7661:HG2_PB_SVrefine2Falcon2Bionano_3743:HG2_PB_SVrefine2PB10Xhap12_5554:HG2_PB_pbsv_7652;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5554;NumExactMatchSVs=1;ClusterMaxShiftDist=0.155102;ClusterMaxSizeDiff=0.155102;ClusterMaxEditDist=0.214876;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=112;DistBack=28;DistForward=127;DistMin=28;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=6:170207367-170207369;PctSeqSimilarity=0.9649;PctSizeSimilarity=0.8889;PctRecOverlap=0.0945;SizeDiff=-14;StartDistance=108;EndDistance=108;GTMatch=0;TruScore=64;MatchId=4893.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:33:0|1:29:8:2:18:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr6	170402570	HG2_PB_SVrefine2Falcon2Bionano_3752	A	AAGCATGGTGTGGGGGGACCCGGAGGCCCCGCGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGGCCCCGCGGTGGGAGGAGCGTGGTGTGGGGGGACCGGGAGGCCGTGGGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGGCCGTGGGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGACCCTGCGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGGCCCTGCGGTGGGAGGAGCGTGGTGTGGGGGGGGACCGGGAGGCCGTGGGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGGCCGTGGGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGACCCTGCGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGGCCCCGCGGTGGGAGGAGCATGGTGTGGGGGGGGACCGGGAGGCCGTGGGGTGGGAGGAGCGTGGTGTGGGGGGGGACCGGGAGACCCTGCGGTGGGAGGAGCGTGGTGTGGGGGGGGACCGGGAGGCCCCGCGGTGGGAGGAGCGTGGTGTGGGGGGACCGGGAGGCCGTGGGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGGCCGTGGGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGGCCCCGCGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGACCCTGCGGTGGGAGGAGCGTGGTGTGGGGGGGACCCGGAGGCCGTGGGGTGGGAGGAGCGTGGTGTGGGGGGGACCCGGAGGCCGTGGGGTGGGAGGAGCGTGGTGTGGGGGGACCCGGAGACCCTGCGGTGGGAGGAGCGTGGTGTGGGGGGGACCCGGAGGCCGTGGGGTGGGAGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4599:HG4_PB_SVrefine2Falcon1Dovetail_4661:HG2_PB_SVrefine2PBcRplusDovetail_9964:HG2_PB_SVrefine2PB10Xhap12_5563:HG2_PB_SVrefine2Falcon2Bionano_3752:HG2_PB_SVrefine2Falcon1plusDovetail_10725;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3752:HG2_PB_SVrefine2PB10Xhap12_5563:HG2_PB_SVrefine2PBcRplusDovetail_9964;NumExactMatchSVs=3;ClusterMaxShiftDist=0.023753;ClusterMaxSizeDiff=0.023753;ClusterMaxEditDist=0.0322967;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=851;DistBack=2705;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=668;REFWIDENED=6:170402571-170403238;PctSeqSimilarity=0.9669;PctSizeSimilarity=0.967;PctRecOverlap=0.5074;SizeDiff=-29;StartDistance=-419;EndDistance=-419;GTMatch=0;TruScore=81;MatchId=4894.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:88:./.:0:2:2:33:./.:0:0:0:0:1/1:0:17:0/1:6:42:.:.:.
chr6	170461203	HG2_PB_SVrefine2Falcon2Bionano_3756	C	CGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGGGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTTTGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGGGTGTAGGAGGGTGAGGGGTGTAGGTGGATGAGGTGTGTAGGTGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGTGGGTGAGGTGTGTAGGTGGATGAGGTGTGTAGGAGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGTGGGTGAGGTGTGTAGGTGGATGAGGTGTGTAGGTGGGTGAGGTGTGTAGGTGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTGAGGTGTGTAGGAGGGTTTGGTGTGTAGGTGGGTGAGGTGTGTA	10	PASS	ClusterIDs=HG4_PB_HySA_11346:HG3_PB_SVrefine2Falcon1Dovetail_4603:HG2_PB_pbsv_7666:HG4_PB_pbsv_7685:HG2_PB_SVrefine2Falcon1plusDovetail_10729:HG2_PB_SVrefine2PBcRplusDovetail_9968:HG2_PB_SVrefine2Falcon2Bionano_3756;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3756:HG2_PB_SVrefine2PBcRplusDovetail_9968;NumExactMatchSVs=2;ClusterMaxShiftDist=0.113645;ClusterMaxSizeDiff=0.113645;ClusterMaxEditDist=0.205671;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1222;DistBack=1192;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=510;REFWIDENED=6:170461207-170461716;PctSeqSimilarity=0.9896;PctSizeSimilarity=1;PctRecOverlap=0.6639;SizeDiff=0;StartDistance=-411;EndDistance=-411;GTMatch=0;TruScore=88;MatchId=4895.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:86:1/1:0:22:0:16:./.:0:0:0:0:./.:0:3:./.:4:67:.:9708:.
chr6	170498832	HG2_PB_SVrefine2Falcon2Bionano_3759	C	CATGATGATGTTGGTAGTGGTGATGATGATGGTGATGGTGATGATGGAGATGGTGGTGATGGTGGTGTTGGTGTCAGTGATGGTGATAGTGATAGTGATGATGATGGTAATCATGGTGGTGGTGATGATGGTGATGATGTTGGTTATGATGATGATGGTGATAGTGATATGGTGATGGTGATGATGATGATGATGGTGGTGATGGTGCTGATGGTGCTGATGGTAATGGTGATGGTGATGATGGGGATGAGGGTGATGGTGGTGGTGGTGATGGTGATGCTGATGGTGATAATGGTGATGGTGAGGTGGTGATGGTGATGATGGTGATGGTAGTGGTGATAATGGTGATGGTGGTGGTGGCAGTGATGATGGTGATGGTGGTGGTGATGTGGTGATGGTGATGATGGTGATAATGGTGATGGTGGTGATTTGGTGATAGTGATAATGGTGGTGGTGATGGTAATGGTAAGGTGGTGATGGTGATAATGGTGATGGTGGTGATTTGGTGATAGTGATAATGGTGGTGGTGATGGTAATGGTAAGGTGGTGATGGTGATAATGGTGATGGTGAGGTGGTGGCAATGATGGTGGTGACTGGTGGTGATGTTGTAATGGTGATGATGGTGGTGATGATGGTGATGGTGGTGGTGGTAGTGATGTGATGGTGGTGGTGGTGGTGGCAGTGATGACGGTGGTGCTGATGTGATGTGATGATGGTGATAATGGTGATGGTGATGACAGTGAGGCTGGTGGTGGTGGCAGTGATGATGGTGATGGTGATGATGATGGTGATAATGGTAATAGTGAGGTGGTGATGGTGATAATGGTGATGGTGAGGTGGTGGCAATGATGGTGGTGACAGTGGTGGTGATGTGGTAATGGTGATGATGGTGGTGATGATGGTGATGGTGATGATGGTGATAATGGTGATGGTGGTGATTTGGTGATAGTGATAATGGTGGTGGTGATGGTAATGGTAAGGTGGTGATGGTGATAATGGTGATGGTGAGGTGGTGGCAATGATGGTGACAGTGGTGGTGATGTGGTAATGGTGATGATGGTGGTGATGATGGTGATGGTGGTGGTGGTAGTGATGTGATGGTGGTGGTGGTGGCAGTGATGATGGTGGTGCTGATGTGATGTGATGATGGTGATAATGGTGATGGTGATGACAGTGAGGGTGGTGGTGGTGTCAGTGATGATGGTGATGGTGATGATGATGGTGATAATGGTAATAGTGAGGTGGTGATGGTGATAATGGTGATGGTGAGGTGGTGGCAATGATGGTGGTGACAGTGGTGGTGATGTGGTAATGGTGATGATGGTGGTGATTATGGTGATGGTGGTGGTGGTGGCAGTGATGACGGTGGTGCTGATGTGATGATGGTGATAATGGTGATGGTGATGACAGTGAGGGTGGTGGTGGTGTCAGTGATGATGGTGATGGTGATGATGATGGTGATAATGGTGATAGTGAGGTGGTGATGGTGATAATGGTGATGGTGGTGGTGGTGGCAGTGATGATGGTGATGGTGGTGGTGATGTGATGGTGATGATGGTGATGGTGATGATGGTGATTTGGTGATAGTGATAATGGTGATGGTGATGACAGTGAGGGTGGTGGTGGTGGCAGTGATGATGGTGATGGTGAGGTGGTGATGGTGATGATGATGGTGATAATGGTGATAGTGAGGTGGTGATGGTGATAATGGTGATGGTGGTGGTGGTGGCAGTGATGATGGTGATGGTGGTGGTGATGTGATGGTGATGATGGTGATGGTGATGATGGTAATTTGGTGATAGTGATAATGGTGATGGTGATGACAGTGAGGGTGGTGGTGGTGGCAGTGATGATGGTGATGGTGATGTGATGGTGATGATGGTGATAATGGTGATAGTGAGGTGGTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3495:HG3_PB_pbsv_7440:HG4_PB_HySA_11354:HG2_PB_pbsv_7668:HG2_PB_HySA_14104:HG2_PB_PB10Xdip_25107:HG2_Ill_breakscan11_3794:HG2_PB_HySA_14103:HG4_PB_pbsv_7695:HG2_PB_SVrefine2Falcon1plusDovetail_10733:HG4_PB_SVrefine2Falcon1Dovetail_4674:HG2_PB_SVrefine2PBcRplusDovetail_9971:HG2_PB_SVrefine2PB10Xhap12_5569:HG2_PB_SVrefine2Falcon2Bionano_3759:HG3_PB_SVrefine2Falcon1Dovetail_4608:HG4_PB_SVrefine2PBcRDovetail_3786;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3759:HG2_PB_SVrefine2PB10Xhap12_5569:HG2_PB_SVrefine2PBcRplusDovetail_9971;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0743363;ClusterMaxSizeDiff=0.0743363;ClusterMaxEditDist=0.195991;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1907;DistBack=6232;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=326;REFWIDENED=6:170498833-170499158;PctSeqSimilarity=0.983;PctSizeSimilarity=0.9855;PctRecOverlap=0.8486;SizeDiff=-28;StartDistance=-279;EndDistance=-279;GTMatch=0;TruScore=93;MatchId=4896.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:70:1/1:2:31:0:12:./.:0:0:0:0:./.:0:6:1/1:5:286:.:9708:.
chr6	170562348	HG3_PB_SVrefine2Falcon1Dovetail_4614	T	TGGAACTCAACACCCCAAATGCTGCAGGGTGCCCTCTCGCCAGGCTGGAGAGGAACTCAACACCCCGAGCTCTGCGGGGTGCCCTCTCGCCAGGCTGGAGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4614:HG2_PB_SVrefine2Falcon1plusDovetail_10738:HG3_PB_HySA_11741:HG3_PB_pbsv_7446:HG3_Ill_Krunchall_10685:HG2_PB_pbsv_7673:HG4_PB_SVrefine2Falcon1Dovetail_4681:HG3_PB_SVrefine2PBcRDovetail_3499;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_4614:HG3_PB_SVrefine2PBcRDovetail_3499;NumExactMatchSVs=2;ClusterMaxShiftDist=0.12;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.25;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=100;DistBack=6146;DistForward=24;DistMin=24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=200;REFWIDENED=6:170562349-170562548;PctSeqSimilarity=0.9802;PctSizeSimilarity=1;PctRecOverlap=0.7525;SizeDiff=0;StartDistance=-25;EndDistance=-25;GTMatch=0;TruScore=91;MatchId=4897.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:24:0|1:26:4:2:17:./.:0:0:0:0:0/1:23:8:./.:.:.:.:.:.
chr7	129061	HG3_PB_SVrefine2Falcon1Dovetail_4632	G	GCAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACACAGAGCCATGGACGACCACCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACACAGAGCCCTGGACGACCACCCTTGCTCCTGTCTCAGGACA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5587:HG2_PB_pbsv_7697:HG3_PB_pbsv_7465:HG2_PB_SVrefine2Falcon1plusDovetail_10763:HG2_PB_PB10Xdip_27242:HG2_PB_PB10Xdip_27241:HG3_PB_SVrefine2Falcon1Dovetail_4632:HG2_PB_SVrefine2PBcRplusDovetail_9995;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5587:HG3_PB_SVrefine2Falcon1Dovetail_4632:HG2_PB_SVrefine2PBcRplusDovetail_9995;NumExactMatchSVs=3;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.24;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=280;DistBack=-74;DistForward=-1;DistMin=-74;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=332;REFWIDENED=7:129062-129393;PctSeqSimilarity=0.997;PctSizeSimilarity=1;PctRecOverlap=0.8114;SizeDiff=0;StartDistance=-53;EndDistance=-53;GTMatch=0;TruScore=93;MatchId=4898.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:18:52:./.:4:24:12:6:./.:0:0:0:0:./.:4:1:./.:.:.:.:.:.
chr7	171548	HG4_PB_assemblyticsfalcon_23640	C	CCCCGACCCCCCTCCCGGCTCCCCGACCCCTCCCGGCTCCCCGACCCCCCTCCCGGCTCCCCGACCCCCCTCCCGGCTCCCCGACCCCCTCCCGGCTCCCCGACCCCCTCCCGGCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3805:HG4_PB_assemblyticsfalcon_23640:HG4_PB_pbsv_7731:HG2_PB_SVrefine2Falcon2Bionano_3778:HG4_PB_SVrefine2Falcon1Dovetail_4707:HG4_PB_SVrefine2Falcon1Dovetail_4706:HG3_PB_pbsv_7468:HG3_PB_SVrefine2Falcon1Dovetail_4635;NumClusterSVs=8;ExactMatchIDs=HG4_PB_assemblyticsfalcon_23640;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.252174;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=115;DistBack=-6015;DistForward=1125;DistMin=-6015;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=85;REFWIDENED=7:171467-171551;PctSeqSimilarity=0.9883;PctSizeSimilarity=0.9664;PctRecOverlap=0.5378;SizeDiff=-4;StartDistance=53;EndDistance=53;GTMatch=0;TruScore=83;MatchId=4899.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:25:0|1:19:6:2:16:./.:0:0:0:0:0/1:7:2:./.:.:.:.:.:.
chr7	202471	HG2_PB_SVrefine2Falcon2Bionano_3780	CA	AGTGTGCATAGAGAGAATGGGTGGCTGCTGGGTGAGATTGCACTGGGGAATGGGGCCCGTGGACATCTTCCCGTGCGCATAGAGAGGACGGGTGACTGCTGGGTGGGATTGTACTGGGGAATGGGGGGGCGCTATGGATATCTTCCCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3780:HG4_PB_SVrefine2Falcon1Dovetail_4709:HG2_PB_SVrefine2Falcon1plusDovetail_10765:HG4_PB_pbsv_7733:HG2_PB_pbsv_7702;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3780;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0604027;ClusterMaxSizeDiff=0.0536913;ClusterMaxEditDist=0.178694;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=146;DistBack=170;DistForward=385;DistMin=170;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=692;REFWIDENED=7:202167-202858;PctSeqSimilarity=0.9954;PctSizeSimilarity=1;PctRecOverlap=0.5135;SizeDiff=0;StartDistance=71;EndDistance=72;GTMatch=0;TruScore=83;MatchId=4900.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:15:0|1:23:2:2:11:./.:0:0:0:0:./.:3:4:./.:.:.:.:.:.
chr7	309389	HG4_Ill_GATKHCSBGrefine_5419	G	GACCCTCCTCTCATCTGGGGTCATCTCCTCCTTGGTCTGGTCCCAGAGGGGTTTGGGT	20	PASS	ClusterIDs=HG4_PB_HySA_11383:HG2_PB_assemblyticsPBcR_23468:HG4_PB_pbsv_7745:HG2_PB_pbsv_7713:HG3_PB_assemblyticsfalcon_24057:HG4_Ill_svaba_9995:HG4_Ill_GATKHC_12826:HG4_Ill_GATKHCSBGrefine_5419:HG4_Ill_250bpfermikitraw_10706:HG2_Ill_svaba_9872:HG2_Ill_GATKHCSBGrefine_5341:HG2_Ill_150bpfermikitraw_10059;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10059:HG2_Ill_GATKHCSBGrefine_5341:HG2_Ill_svaba_9872:HG4_Ill_250bpfermikitraw_10706:HG4_Ill_GATKHCSBGrefine_5419:HG4_Ill_GATKHC_12826:HG4_Ill_svaba_9995;NumExactMatchSVs=7;ClusterMaxShiftDist=0.160714;ClusterMaxSizeDiff=0.107143;ClusterMaxEditDist=0.25;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=57;DistForward=12849;DistMin=57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=2849;REFWIDENED=7:309332-312116;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4901.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:26:0|1:28:5:4:20:./.:0:0:0:0:0/1:27:14:./.:.:.:.:.:.
chr7	373902	HG2_Ill_GATKHC_12756	T	TGCATCCACATGCATGCAGAAACACGCACACACAAACGCGCACACAGGCACACATGCATCCACATGCATGCAGAAACACGCACACACAAACGCGCACACAG	20	PASS	ClusterIDs=HG2_PB_pbsv_7718:HG2_PB_HySA_14136:HG4_Ill_GATKHC_12830:HG2_Ill_GATKHC_12756:HG4_PB_assemblyticsfalcon_23656:HG4_PB_SVrefine2Falcon1Dovetail_4718;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHC_12756:HG4_Ill_GATKHC_12830;NumExactMatchSVs=2;ClusterMaxShiftDist=0.113744;ClusterMaxSizeDiff=0.11215;ClusterMaxEditDist=0.208531;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=100;DistBack=23;DistForward=2345;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=406;REFWIDENED=7:373697-374102;PctSeqSimilarity=0.9651;PctSizeSimilarity=0.9259;PctRecOverlap=0.7431;SizeDiff=-8;StartDistance=24;EndDistance=24;GTMatch=0;TruScore=87;MatchId=4902.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:./.:0:0:0:0:./.:0:0:0:0:./.:4:1:./.:.:.:.:.:.
chr7	397171	HG2_PB_SVrefine2PB10Xhap12_5603	C	GGGTAGGGATGCAGTGGGCTCTGTGCTCGCCTCCTGAGAGGCACGGGGCTGAGGACCTGTGAGCGGGTGGGGATGCAGTGGGCTCTGTGCTCGCCTCCTGAGAGGCACGGGGCTGAGGACCTGTGAGCGGGTGGGGATGCAGTGGGCCCTGTGCTTGCCTCCTGAGAGGCACGGGGCTGAGGACTTGTGAGCAGGTGGGGATGCAGTGGGCCCTGTGCTCACCTCCTGAGAGGCACGGGGCTGAGGACCTGTGAGGG	20	PASS	ClusterIDs=HG2_PB_pbsv_7722:HG2_PB_HySA_14144:HG3_PB_pbsv_7484:HG3_PB_SVrefine2PBcRDovetail_3522:HG3_PB_SVrefine2Falcon1Dovetail_4644:HG2_PB_SVrefine2Falcon2Bionano_3786:HG4_PB_SVrefine2PBcRDovetail_3815:HG4_PB_HySA_11399:HG4_PB_SVrefine2Falcon1Dovetail_4721:HG2_PB_SVrefine2PBcRplusDovetail_10010:HG2_PB_SVrefine2PB10Xhap12_5603:HG2_PB_PB10Xdip_27293:HG2_PB_PB10Xdip_27292:HG2_Ill_SVrefine2DISCOVARplusDovetail_11747:HG2_PB_SVrefine2Falcon1plusDovetail_10777:HG4_PB_pbsv_7755;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11747:HG2_PB_PB10Xdip_27292:HG2_PB_PB10Xdip_27293:HG2_PB_SVrefine2PB10Xhap12_5603:HG2_PB_SVrefine2PBcRplusDovetail_10010;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0537428;ClusterMaxSizeDiff=0.045977;ClusterMaxEditDist=0.243902;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=256;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=126;REFWIDENED=7:397172-397297;PctSeqSimilarity=0.9981;PctSizeSimilarity=0.9961;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4903.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:52:1/1:3:22:0:5:./.:0:0:0:0:1/1:0:22:./.:.:.:.:1715:.
chr7	420489	HG2_PB_SVrefine2Falcon2Bionano_3788	C	CGGACAGAGGGAGGGAGGGGAGGGGGCAGGGGGACAGAGGGAGGCAGGGGAGGGGGCAGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3788:HG4_PB_assemblyticsfalcon_23660:HG2_PB_pbsv_7724:HG3_PB_pbsv_7486;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3788;NumExactMatchSVs=1;ClusterMaxShiftDist=0.113821;ClusterMaxSizeDiff=0.113821;ClusterMaxEditDist=0.260163;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=60;DistBack=9463;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=103;REFWIDENED=7:420488-420593;PctSeqSimilarity=0.9952;PctSizeSimilarity=1;PctRecOverlap=0.2787;SizeDiff=0;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=75;MatchId=4904.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:37:0|1:20:4:3:31:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr7	483754	HG2_PB_SVrefine2PBcRplusDovetail_10014	TTTTCCCTCTCA	GATGAGTATGTGGATGGGTAGATGGATGGGTGGGTGAATAGATGAATGGAGGGATGGATGGATGGATGGATGGATGGATGGATGGATGGGAAGGTGGGCGGGTGAATGGATGAGTGGG	20	PASS	ClusterIDs=HG3_PB_pbsv_7489:HG2_PB_SVrefine2PB10Xhap12_5608:HG4_PB_SVrefine2PBcRDovetail_3820:HG4_Ill_manta_1920:HG4_Ill_SVrefine2DISCOVARDovetail_5647:HG2_PB_assemblyticsPBcR_23480:HG2_PB_SVrefine2PBcRplusDovetail_10014:HG2_PB_SVrefine2Falcon2Bionano_3792:HG4_PB_assemblyticsfalcon_23664:HG4_PB_SVrefine2Falcon1Dovetail_4726:HG3_PB_assemblyticsfalcon_24066:HG3_PB_SVrefine2Falcon1Dovetail_4647:HG3_Ill_SVrefine2DISCOVARDovetail_5842:HG3_PB_SVrefine2PBcRDovetail_3524:HG2_Ill_SVrefine2DISCOVARplusDovetail_11753:HG2_PB_SVrefine2Falcon1plusDovetail_10780:HG3_Ill_MetaSV_4747:HG2_Ill_MetaSV_4574:HG4_Ill_MetaSV_4787:HG2_PB_PB10Xdip_27300:HG2_PB_PB10Xdip_27299:HG2_PB_pbsv_7729;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3792:HG2_PB_SVrefine2PBcRplusDovetail_10014:HG2_PB_assemblyticsPBcR_23480:HG4_Ill_SVrefine2DISCOVARDovetail_5647:HG4_Ill_manta_1920:HG4_PB_SVrefine2PBcRDovetail_3820;NumExactMatchSVs=6;ClusterMaxShiftDist=0.172131;ClusterMaxSizeDiff=0.172131;ClusterMaxEditDist=0.225941;PBcalls=15;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=106;DistBack=-12;DistForward=7440;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:483766-483753;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.9381;PctRecOverlap=0.9322;SizeDiff=-7;StartDistance=-11;EndDistance=0;GTMatch=1;TruScore=95;MatchId=4905.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:1:27:2:21:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr7	499498	HG4_Ill_GATKHC_12845	T	TGCCTCAACAGAATCAGTGCATCCCATTGGCCAGCCTCAACAGGATCACTGCATCCCACTAGCCA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_10704:HG2_PB_pbsv_7734:HG2_PB_HySA_14150:HG4_Ill_GATKHC_12845:HG4_Ill_250bpfermikitraw_10713:HG2_Ill_GATKHC_12772;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10704:HG4_Ill_GATKHC_12845:HG4_Ill_250bpfermikitraw_10713:HG2_Ill_GATKHC_12772;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0458015;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.0610687;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=176;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=74;REFWIDENED=7:499497-499573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4906.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:10:24:./.:9:7:1:15:./.:0:0:0:0:0/1:24:8:./.:.:.:.:.:.
chr7	504287	HG4_Ill_Cortex_3337	C	CCCTCTCCTCTGCGGGCTGCAGGGATCTGCGGCTGGTCTAGCGGCTGCACTCCTACCAGGTGTCACGCCT	20	PASS	ClusterIDs=HG2_PB_pbsv_7735:HG2_PB_HySA_14151:HG4_Ill_svaba_10008:HG4_Ill_manta_1921:HG4_Ill_Krunchall_11323:HG4_Ill_GATKHC_12846:HG4_Ill_GATKHCSBGrefine_5430:HG4_Ill_Cortex_3337:HG4_Ill_250bpfermikitraw_10714:HG2_Ill_svaba_9885:HG2_Ill_manta_2231:HG2_Ill_SpiralSDKrefine_15436:HG2_Ill_Krunchall_10986:HG2_Ill_GATKHC_12773:HG2_Ill_GATKHCSBGrefine_5350:HG2_Ill_Cortex_8130:HG2_Ill_250bpfermikitraw_10705:HG2_Ill_150bpfermikitraw_10068;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10068:HG2_Ill_250bpfermikitraw_10705:HG2_Ill_Cortex_8130:HG2_Ill_GATKHCSBGrefine_5350:HG2_Ill_GATKHC_12773:HG2_Ill_Krunchall_10986:HG2_Ill_SpiralSDKrefine_15436:HG2_Ill_manta_2231:HG2_Ill_svaba_9885:HG4_Ill_250bpfermikitraw_10714:HG4_Ill_Cortex_3337:HG4_Ill_GATKHCSBGrefine_5430:HG4_Ill_GATKHC_12846:HG4_Ill_Krunchall_11323:HG4_Ill_manta_1921:HG4_Ill_svaba_10008;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0729927;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.189781;PBcalls=2;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=2;DistForward=2577;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=7:504286-504288;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4907.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:18:0|1:12:4:4:13:./.:0:0:0:0:0/1:29:16:./.:.:.:.:3160:.
chr7	580918	HG2_Ill_GATKHCSBGrefine_5353	G	GCTGAGCCCCCCACCCCCACCTCCAGGGAACCCACTGAGACCCCCACCGCCACCCCATCCCCAGGGAGCCCA	20	PASS	ClusterIDs=HG2_PB_pbsv_7744:HG4_PB_HySA_11418:HG4_PB_pbsv_7780:HG2_PB_HySA_14164:HG3_PB_pbsv_7509:HG4_PB_assemblyticsfalcon_23676:HG4_Ill_GATKHC_12851:HG2_Ill_GATKHC_12779:HG2_Ill_GATKHCSBGrefine_5353:HG2_PB_assemblyticsPBcR_23486:HG3_PB_assemblyticsfalcon_24075:HG4_Ill_svaba_10016:HG3_Ill_svaba_9975:HG2_Ill_svaba_9891:HG3_PB_HySA_11796:HG2_PB_PB10Xdip_27336:HG2_PB_PB10Xdip_27335;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5353:HG2_Ill_GATKHC_12779:HG4_Ill_GATKHC_12851;NumExactMatchSVs=3;ClusterMaxShiftDist=0.191176;ClusterMaxSizeDiff=0.176471;ClusterMaxEditDist=0.239437;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=-117;DistForward=8;DistMin=-117;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=21;REFWIDENED=7:580917-580940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4910.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:1/1:0:30:3:21:./.:0:0:0:0:./.:1:3:./.:.:.:.:.:.
chr7	623127	HG2_Ill_250bpfermikitraw_10710	T	TGTGCACACCCATACACACCCACACGCGTGCACACACCCACTCTCACACGTGCACTCACACCCACGCACACAC	20	PASS	ClusterIDs=HG4_PB_pbsv_7781:HG3_PB_HySA_11801:HG3_PB_pbsv_7513:HG2_PB_HySA_14169:HG2_PB_pbsv_7745:HG4_Ill_scalpel_7398:HG4_Ill_GATKHCSBGrefine_5434:HG3_Ill_GATKHC_12761:HG3_Ill_GATKHCSBGrefine_5273:HG2_Ill_GATKHC_12781:HG2_Ill_GATKHCSBGrefine_5357:HG2_Ill_250bpfermikitraw_10710:HG2_Ill_150bpfermikitraw_10072:HG4_PB_HySA_11420:HG2_PB_PB10Xdip_27350:HG2_PB_PB10Xdip_27349;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10072:HG2_Ill_250bpfermikitraw_10710:HG2_Ill_GATKHCSBGrefine_5357:HG2_Ill_GATKHC_12781:HG3_Ill_GATKHCSBGrefine_5273:HG3_Ill_GATKHC_12761:HG4_Ill_GATKHCSBGrefine_5434:HG4_Ill_scalpel_7398;NumExactMatchSVs=8;ClusterMaxShiftDist=0.130719;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.267516;PBcalls=8;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=6430;DistForward=55;DistMin=55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=209;REFWIDENED=7:622975-623183;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4911.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:60:1/1:2:31:1:19:./.:0:0:0:0:./.:0:5:./.:.:.:.:2655:.
chr7	637772	HG2_PB_SVrefine2Falcon1plusDovetail_10797	G	GCACTAAACCCATCACCCTCCAGCACCCTCCAGACTAACACCATCACCCTCCCTCCAGCACCCTCCGCACTAAACACCATCACCCTCCAGCACCCTCCACACTAAATACCATCACCCTCCCTCCAGCACCCTCCACACTAAACACCATCGCCCTCGCTCCAGCACCCTCCGCTCTAAACACCATCGCCCTCCCTCCAGCACCCTCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3803:HG3_PB_pbsv_7515:HG2_PB_SVrefine2Falcon1plusDovetail_10797:HG3_PB_SVrefine2Falcon1Dovetail_4660;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10797;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0637255;ClusterMaxSizeDiff=0.0490196;ClusterMaxEditDist=0.197044;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=206;DistBack=0;DistForward=14;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=8;REFWIDENED=7:637771-637781;PctSeqSimilarity=0.971;PctSizeSimilarity=0.9717;PctRecOverlap=0.5962;SizeDiff=-6;StartDistance=-83;EndDistance=-83;GTMatch=0;TruScore=84;MatchId=4912.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:0|1:18:3:3:16:./.:0:0:0:0:0/0:22:0:./.:.:.:.:.:.
chr7	643451	HG2_PB_SVrefine2Falcon1plusDovetail_10799	G	GTGGAGAGGCGGGGGAGGAGGTGACATGGTGACACCAGGACCCAGAGTGGAGAGGCGGGGGAGGAGTGACATGGTGACACCAGGACCCAGAGTGGAGAGGGCAGGGGAGGAGGTGACAGGTAACACCAGGACCCAGAGTGGAGAGGGCGGGGGAGGAGGTGACATGGTGACACCAGGACCCAGAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10799:HG2_PB_pbsv_7748:HG3_PB_assemblyticsfalcon_24080:HG2_PB_SVrefine2Falcon2Bionano_3805:HG3_PB_SVrefine2Falcon1Dovetail_4662;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10799;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0592992;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.161725;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=184;DistBack=27;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=345;REFWIDENED=7:643203-643547;PctSeqSimilarity=0.9893;PctSizeSimilarity=0.9787;PctRecOverlap=0.9788;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4913.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:26:0|1:22:1:1:21:./.:0:0:0:0:./.:5:2:./.:.:.:.:.:.
chr7	651899	HG4_Ill_GATKHCSBGrefine_5437	C	CAACGGATGGATGGATGGATAGATGGATGGACGGACAGGTGGGTGGATGAATAGGTGGGTGAGTAGATT	20	PASS	ClusterIDs=HG3_PB_HySA_11807:HG2_PB_pbsv_7750:HG4_PB_assemblyticsfalcon_23685:HG4_Ill_GATKHCSBGrefine_5437:HG4_Ill_150bpfermikitraw_10274:HG3_PB_assemblyticsfalcon_24081:HG3_Ill_GATKHCSBGrefine_5276:HG2_Ill_GATKHCSBGrefine_5360;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5360:HG3_Ill_GATKHCSBGrefine_5276:HG3_PB_assemblyticsfalcon_24081:HG4_Ill_150bpfermikitraw_10274:HG4_Ill_GATKHCSBGrefine_5437:HG4_PB_assemblyticsfalcon_23685;NumExactMatchSVs=6;ClusterMaxShiftDist=0.057554;ClusterMaxSizeDiff=0.0143885;ClusterMaxEditDist=0.201439;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=68;DistBack=7;DistForward=36;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=425;REFWIDENED=7:651784-652208;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4914.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:0|1:26:5:2:14:./.:0:0:0:0:./.:4:3:./.:.:.:.:.:.
chr7	791927	HG3_PB_SVrefine2PBcRDovetail_3539	G	GCGAAGCCTTTGTGACAGTGGGCCGGGCCACACTTCGTGGGATACGTCCTCAAAAGACCGCAGAGTGATGACGAAGCCTTTGTCACCGCGGGCCGGGCCACGCTTCCCTGGGTGCATCCTCAAAAGACTGCAGAGTGACGACGAAGCCTTCGTGACCGCGGGCTGGGCCACGCTTCGTGGGATACGTCCTCAAAAGACCACAGAGTGACGACGAAGCCTTTGTCACCACGGGCCAGGCCACACTTCCCTGGGTGCATCCTCAAAAGACTGCAGAGTGACGA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4743:HG4_PB_HySA_11437:HG2_PB_pbsv_7759:HG2_PB_PB10Xdip_29031:HG4_PB_pbsv_7796:HG2_PB_PB10Xdip_29030:HG3_PB_HySA_11818:HG4_PB_SVrefine2PBcRDovetail_3830:HG3_PB_SVrefine2PBcRDovetail_3539:HG3_PB_SVrefine2Falcon1Dovetail_4668:HG3_Ill_SVrefine2DISCOVARDovetail_5852:HG2_PB_SVrefine2PBcRplusDovetail_10029:HG2_PB_SVrefine2PB10Xhap12_5628:HG2_PB_SVrefine2Falcon2Bionano_3809:HG2_PB_SVrefine2Falcon1plusDovetail_10803:HG2_10X_SVrefine210Xhap12_5527;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5527:HG2_PB_SVrefine2Falcon1plusDovetail_10803:HG2_PB_SVrefine2Falcon2Bionano_3809:HG2_PB_SVrefine2PB10Xhap12_5628:HG2_PB_SVrefine2PBcRplusDovetail_10029:HG3_Ill_SVrefine2DISCOVARDovetail_5852:HG3_PB_SVrefine2Falcon1Dovetail_4668:HG3_PB_SVrefine2PBcRDovetail_3539:HG4_PB_SVrefine2PBcRDovetail_3830;NumExactMatchSVs=9;ClusterMaxShiftDist=0.048951;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.204861;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=280;DistBack=4236;DistForward=405;DistMin=405;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=407;REFWIDENED=7:791928-792334;PctSeqSimilarity=0.9899;PctSizeSimilarity=1;PctRecOverlap=0.7722;SizeDiff=0;StartDistance=-64;EndDistance=-64;GTMatch=0;TruScore=92;MatchId=4915.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:89:1/1:1:23:3:22:./.:0:0:0:0:1/1:1:22:./.:.:.:.:.:.
chr7	873707	HG2_PB_PB10Xdip_29032	T	TTGTAGGCTGGGCTGGGAATTAGACTCTTGGTGGGCAGGGGCTGGCTGGATGG	10	PASS	ClusterIDs=HG2_PB_HySA_14187:HG3_PB_assemblyticsfalcon_24090:HG2_PB_HySA_14188:HG4_PB_HySA_11443:HG3_PB_HySA_11823:HG2_PB_PB10Xdip_29033:HG2_PB_PB10Xdip_29032;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_29032:HG2_PB_PB10Xdip_29033;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0934579;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.213592;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=52;DistBack=7767;DistForward=60;DistMin=60;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=213;REFWIDENED=7:873682-873894;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9811;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4916.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:33:./.:6:12:5:16:./.:0:0:0:0:0/0:21:0:./.:.:.:.:.:.
chr7	942092	HG4_PB_SVrefine2Falcon1Dovetail_4746	C	CCTCAAAAAAAAAAAAAAAAAAATGCCTGGGCGTGGTGGTGCGCGCCTATAGTTCCAGCTACTTGGGAGGTTGGGAGGCTGAGGCAAGAAAATCACTTGAACCCAGAGGCAGAGGTTGCAGTGAGCTGAGATCGCACCATTGCACTCCAGCCTGGGCAACACAGCAAGACTCGAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10812:HG2_PB_PB10Xdip_29168:HG2_PB_pbsv_7771:HG2_PB_SVrefine2Falcon1plusDovetail_10813:HG4_PB_assemblyticsfalcon_23702:HG3_PB_assemblyticsfalcon_24102:HG4_PB_pbsv_7807:HG4_PB_SVrefine2Falcon1Dovetail_4746:HG2_PB_SVrefine2PBcRplusDovetail_10037:HG2_Ill_SVrefine2DISCOVARplusDovetail_11763:HG2_Ill_MetaSV_4579:HG4_Ill_MetaSV_4790:HG4_PB_HySA_11447:HG3_PB_SVrefine2Falcon1Dovetail_4675:HG2_PB_HySA_14203:HG3_PB_pbsv_7539:HG4_Ill_SVrefine2DISCOVARDovetail_5661:HG3_Ill_SVrefine2DISCOVARDovetail_5856:HG2_PB_SVrefine2PBcRplusDovetail_10036:HG2_PB_SVrefine2Falcon2Bionano_3815:HG2_10X_SVrefine210Xhap12_5535:HG2_PB_SVrefine2PB10Xhap12_5635;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_MetaSV_4579:HG2_Ill_SVrefine2DISCOVARplusDovetail_11763:HG2_PB_PB10Xdip_29168:HG4_PB_SVrefine2Falcon1Dovetail_4746:HG2_PB_SVrefine2PBcRplusDovetail_10037;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.211699;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=174;DistBack=-20;DistForward=-1;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=125;REFWIDENED=7:941988-942112;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4918.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:./.:1:31:1:2:./.:0:0:0:0:./.:0:6:./.:.:.:.:.:.
chr7	970100	HG3_Ill_MetaSV_4755	T	TCAGGAGTTTGAGACCATCCTGACCAACATGGTGAAACCCCGTCTCTAGTAAAAATACAAAAAAAATAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCGGAGATCGCACCACTGCACCCTGGCCTGGGCGGCAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAGATCCTGAGAACAACTTCTCACTCATCAGGGCAGCAAAGGAGAAGCCGTGGGCCGCCAGTGTGCTGGGGAGGAGGTGGCAAACACCCCCACGGCGTGCTGGGGGCATGTGAGCAGTTACAGTGGGGAGTTTGGCAAAAATCTCTCCAAAATTACCAAGCCACGTAACTTTTGAACTTGCTCTTTCACTTCTAGGAATTTAGGCCACCAACATACTTCCATATGTGCGAAGTGACGCACCAGTGAGGCTGCTTGCCGGCCCAGTGGGAACGGCAGGAACAGTCTGGAAATGACTGGCACATCCCACCCAAGGGAGGCGGCAAACAGGCCGTGGTTCCCCCAGGAGGGCGAGGGGCTCCACGTGCACTCAACAGGCAAAGAACGTCTGTTAGAAGCACACGCTAGGCCCGGCGCCGAGGCACACACCTGTCATCCCAGCATTTCAGGAGGATCATTTGAGCC	20	PASS	ClusterIDs=HG3_Ill_Spiral_8393:HG3_PB_pbsv_7544:HG2_PB_pbsv_7774:HG4_PB_pbsv_7814:HG4_PB_assemblyticsfalcon_23706:HG4_PB_HySA_11451:HG4_PB_SVrefine2Falcon1Dovetail_4750:HG3_PB_SVrefine2Falcon1Dovetail_4679:HG3_PB_SVrefine2PBcRDovetail_3547:HG3_Ill_SVrefine2DISCOVARDovetail_5859:HG3_Ill_MetaSV_4755:HG3_Ill_GATKHCSBGrefine_5286:HG2_Ill_MetaSV_4580:HG2_10X_SVrefine210Xhap12_5537:HG4_PB_SVrefine2PBcRDovetail_3835:HG2_PB_SVrefine2PBcRplusDovetail_10040:HG2_PB_SVrefine2PB10Xhap12_5639:HG2_PB_SVrefine2Falcon1plusDovetail_10817:HG2_Ill_GATKHCSBGrefine_5369:HG4_Ill_SVrefine2DISCOVARDovetail_5666:HG4_Ill_GATKHCSBGrefine_5448:HG2_Ill_SVrefine2DISCOVARplusDovetail_11765:HG2_PB_PB10Xdip_29195:HG2_PB_PB10Xdip_29196:HG4_Ill_Spiral_642:HG2_Ill_Spiral_562;NumClusterSVs=26;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_5286:HG3_Ill_MetaSV_4755:HG3_Ill_SVrefine2DISCOVARDovetail_5859:HG3_PB_SVrefine2PBcRDovetail_3547;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0880231;ClusterMaxSizeDiff=0.0880231;ClusterMaxEditDist=0.193142;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=689;DistBack=4;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=7:970101-970129;PctSeqSimilarity=0.9978;PctSizeSimilarity=0.9971;PctRecOverlap=0.9971;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4919.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:0:10:0:20:./.:0:0:0:0:1/1:0:22:./.:4:59:.:.:.
chr7	1300803	HG2_PB_SVrefine2Falcon1plusDovetail_10829	T	TGGGAGGATGGCAGGGGACGGACTGGGAGGATGGCAGGGGACGGACTGGGAGGATGGCAGGGGACGGACAGGGAGGATGGCAGGGGCAGGGAGGATGGCAGGGACGGACTGGGAGGATGGCAGGGGACGGACTGGGAGGATGGCAGGGGATGGACTGGGAGGATGGCAGGGCAGGGGAGGATGGCAGAGGACGGACTGGGAGGATGGCAGGGGACGGACTGGGAGGATGGCAGGGGACGGGTTGGGAGGATGGCAGGGGATGGTTTGGAGGATGGCAGGGGACGGACTGGGAGGATGGCAGGGGATGGACTGGAGGATGGCACGGGCAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5656:HG2_PB_SVrefine2Falcon1plusDovetail_10829:HG3_PB_pbsv_7569:HG2_PB_pbsv_7801;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10829;NumExactMatchSVs=1;ClusterMaxShiftDist=0.152623;ClusterMaxSizeDiff=0.149444;ClusterMaxEditDist=0.304414;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=328;DistBack=-244;DistForward=-1;DistMin=-244;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=526;REFWIDENED=7:1300804-1301329;PctSeqSimilarity=0.994;PctSizeSimilarity=0.988;PctRecOverlap=0.988;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4921.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:40:./.:10:14:3:5:./.:0:0:0:0:./.:2:0:./.:1:4:.:.:.
chr7	1524574	HG3_Ill_SVrefine2DISCOVARDovetail_5867	T	TGCTGACCCCGTCCCCTCCCCAGGGCCACACTGCCGGCTGGCCCCGTCCCCTCCCCAGGGCCACACTGCCG	20	PASS	ClusterIDs=HG2_PB_pbsv_7812:HG3_PB_HySA_11869:HG3_PB_pbsv_7580:HG3_Ill_250bpfermikitraw_10433:HG2_Ill_250bpfermikitraw_10744:HG2_PB_SVrefine2Falcon2Bionano_3840:HG3_PB_SVrefine2PBcRDovetail_3566:HG3_PB_SVrefine2Falcon1Dovetail_4702:HG3_Ill_SVrefine2DISCOVARDovetail_5867;NumClusterSVs=9;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_5867:HG3_PB_SVrefine2Falcon1Dovetail_4702:HG3_PB_SVrefine2PBcRDovetail_3566;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0567376;ClusterMaxSizeDiff=0.0141844;ClusterMaxEditDist=0.28169;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=8444;DistForward=167;DistMin=167;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=74;REFWIDENED=7:1524573-1524649;PctSeqSimilarity=0.9934;PctSizeSimilarity=1;PctRecOverlap=0.9296;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=97;MatchId=4922.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:23:0|1:27:1:2:22:./.:0:0:0:0:0/1:26:6:./.:.:.:.:.:.
chr7	1528947	HG4_Ill_GATKHCSBGrefine_5470	T	TCCCGGGCCCGCCGAGGGGACGTGCGCACTCACTTCAGGCCCTGCTCCCAGC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5557:HG4_PB_pbsv_7848:HG2_PB_HySA_14273:HG2_Ill_breakscan11_3800:HG3_PB_pbsv_7581:HG3_PB_SVrefine2Falcon1Dovetail_4703:HG3_PB_HySA_11870:HG4_PB_HySA_11486:HG4_Ill_svaba_10059:HG4_Ill_Krunchall_11353:HG4_Ill_GATKHC_12903:HG4_Ill_GATKHCSBGrefine_5470:HG4_Ill_250bpfermikitraw_10749:HG4_Ill_150bpfermikitraw_10304:HG3_Ill_svaba_10026:HG3_Ill_manta_1830:HG3_Ill_Spiral_8407:HG3_Ill_Krunchall_10739:HG3_Ill_GATKHC_12806:HG3_Ill_GATKHCSBGrefine_5307:HG3_Ill_250bpfermikitraw_10434:HG3_Ill_150bpfermikitraw_10145:HG2_Ill_svaba_9934:HG2_Ill_manta_2240:HG2_Ill_SpiralSDKrefine_15465:HG2_Ill_Krunchall_11021:HG2_Ill_GATKHC_12829:HG2_Ill_GATKHCSBGrefine_5387:HG2_Ill_250bpfermikitraw_10745:HG2_Ill_150bpfermikitraw_10101:HG2_PB_PB10Xdip_26690:HG2_PB_PB10Xdip_26689:HG4_PB_SVrefine2Falcon1Dovetail_4772:HG4_PB_SVrefine2PBcRDovetail_3853:HG4_Ill_SVrefine2DISCOVARDovetail_5680:HG3_PB_SVrefine2PBcRDovetail_3567:HG3_Ill_SVrefine2DISCOVARDovetail_5868:HG2_PB_SVrefine2PBcRplusDovetail_10067:HG2_PB_SVrefine2PB10Xhap12_5667:HG2_Ill_SVrefine2DISCOVARplusDovetail_11777;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10101:HG2_Ill_250bpfermikitraw_10745:HG2_Ill_GATKHCSBGrefine_5387:HG2_Ill_GATKHC_12829:HG2_Ill_Krunchall_11021:HG2_Ill_SpiralSDKrefine_15465:HG2_Ill_manta_2240:HG2_Ill_svaba_9934:HG3_Ill_150bpfermikitraw_10145:HG3_Ill_250bpfermikitraw_10434:HG3_Ill_GATKHCSBGrefine_5307:HG3_Ill_GATKHC_12806:HG3_Ill_Krunchall_10739:HG3_Ill_Spiral_8407:HG3_Ill_manta_1830:HG3_Ill_svaba_10026:HG4_Ill_150bpfermikitraw_10304:HG4_Ill_250bpfermikitraw_10749:HG4_Ill_GATKHCSBGrefine_5470:HG4_Ill_GATKHC_12903:HG4_Ill_Krunchall_11353:HG4_Ill_svaba_10059:HG4_PB_HySA_11486;NumExactMatchSVs=23;ClusterMaxShiftDist=0.15534;ClusterMaxSizeDiff=0.135922;ClusterMaxEditDist=0.256881;PBcalls=13;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=51;DistBack=2;DistForward=34;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=7:1528931-1528981;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4923.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:52:1/1:4:21:3:28:./.:0:0:0:0:1/1:0:50:./.:.:.:.:.:.
chr7	1798192	HG2_PB_PB10Xdip_26696	A	AGCTGGCTGAGGGTGGAGGCTGGGGTGGCTGAGGGTGGAGGCTGGCTGGCTGAGATGGAGGCTGGCTGGCTGAGGGTGGAGGCTGGGCTGAGGGTGGAGGCTGGCTGGCTGAGGGTGGAGGCTGGGGTGGCTGAGGGTGGAGGCTGGCTGGCTGAGGGTGGAGGCTGGGCTAAGGGTGGAGGCTGGCTGGCTGAGGGTGGAGGCTGGGCTGAGGGTGGAGGCTGGCTGGCTGAGGGTGGAGGCTAGCTGGCTGAGGGTGGAGGCTGGGGTGGCTGAGGGTGGAGGCTGGCTGGCTGAGGATGGAGGCTGGCTGGCTGAGGGTGGAGGCTGGGCTGAGGGTGGAGGCTGGCTGGCTGAGGGTGGAGGCTAGCTGGCTGAGGGTGGAGACTAGCTGGCTGAGGGTGGAGGCTGGGGTGGCTGAGGGTGGAGGCTGGCTGGCTGAGGATGGAGGCTGGCTGGCTGAGGGTGGAGGCTGGGCTGAGGGTGGAGGCTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4706:HG4_PB_pbsv_7854:HG2_PB_pbsv_7821:HG2_PB_HySA_14280:HG3_PB_pbsv_7587:HG2_PB_PB10Xdip_26697:HG2_PB_PB10Xdip_26696:HG4_PB_SVrefine2Falcon1Dovetail_4777:HG2_PB_SVrefine2Falcon2Bionano_3842:HG2_PB_SVrefine2Falcon1plusDovetail_10840:HG2_PB_SVrefine2PBcRplusDovetail_10070:HG2_PB_SVrefine2PB10Xhap12_5671:HG4_PB_SVrefine2PBcRDovetail_3855;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_26696:HG2_PB_PB10Xdip_26697;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0946626;ClusterMaxSizeDiff=0.0946626;ClusterMaxEditDist=0.229703;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=492;DistBack=20;DistForward=129;DistMin=20;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=330;REFWIDENED=7:1797996-1798325;PctSeqSimilarity=0.999;PctSizeSimilarity=0.998;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4924.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:83:1/1:1:15:0:33:./.:0:0:0:0:./.:0:1:0/1:4:25:.:.:.
chr7	1980561	HG2_Ill_SVrefine2DISCOVARplusDovetail_11782	C	CCCTCCTCCCCCAGGCCTCACCCTCCTCTTCCTCCCCCCGCAGGCCTCACCCTCCTCTTCCTCTCCCAGGCCTCAGCCTCCTCTTCCTCTCCCAGGCCTCAGCCTCCTCTTCCTCCCCCCGCAGGCCTCACCCTCCTCTTCCTCTCCCAGGCCTCAGCCTCCTCTT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11782:HG2_PB_PB10Xdip_27168:HG4_PB_pbsv_7861:HG2_PB_pbsv_7828:HG2_PB_HySA_14289:HG4_PB_SVrefine2Falcon1Dovetail_4783:HG4_PB_SVrefine2PBcRDovetail_3859:HG3_PB_pbsv_7599:HG3_PB_SVrefine2Falcon1Dovetail_4714:HG2_PB_SVrefine2PB10Xhap12_5678:HG2_PB_SVrefine2Falcon2Bionano_3847:HG2_PB_SVrefine2Falcon1plusDovetail_10845:HG2_PB_SVrefine2PBcRplusDovetail_10077:HG3_Ill_SVrefine2DISCOVARDovetail_5875;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11782:HG3_Ill_SVrefine2DISCOVARDovetail_5875;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0729483;ClusterMaxSizeDiff=0.0668693;ClusterMaxEditDist=0.22561;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=165;DistBack=1418;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=91;REFWIDENED=7:1980562-1980652;PctSeqSimilarity=0.9836;PctSizeSimilarity=0.9818;PctRecOverlap=0.697;SizeDiff=3;StartDistance=-49;EndDistance=-49;GTMatch=1;TruScore=88;MatchId=4925.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:42:1/1:2:11:1:17:./.:0:0:0:0:./.:2:21:./.:.:.:.:.:.
chr7	2042675	HG4_Ill_manta_1930	C	CCCCAGGCCACAGCACAGAGGAACTCGGGAGGAAGGGCCAGGCAGGGGGCCTTGTGAGACCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5576:HG2_PB_PB10Xdip_27171:HG3_PB_pbsv_7607:HG4_PB_pbsv_7864:HG4_Ill_svaba_10072:HG4_Ill_manta_1930:HG4_Ill_Krunchall_11361:HG4_Ill_GATKHC_12912:HG4_Ill_GATKHCSBGrefine_5477:HG4_Ill_Cortex_3349:HG4_Ill_250bpfermikitraw_10757:HG4_Ill_150bpfermikitraw_10313:HG3_PB_assemblyticsfalcon_24174:HG3_Ill_svaba_10051:HG3_Ill_manta_1832:HG3_Ill_Spiral_8424:HG3_Ill_Krunchall_10754:HG3_Ill_GATKHC_12824:HG3_Ill_GATKHCSBGrefine_5314:HG3_Ill_Cortex_3367:HG3_Ill_250bpfermikitraw_10454:HG3_Ill_150bpfermikitraw_10161:HG2_PB_HySA_14293:HG2_Ill_svaba_9955:HG2_Ill_SpiralSDKrefine_15476:HG2_Ill_Krunchall_11033:HG2_Ill_GATKHC_12842:HG2_Ill_GATKHCSBGrefine_5393:HG2_Ill_Cortex_8143:HG2_Ill_250bpfermikitraw_10755:HG2_Ill_150bpfermikitraw_10111:HG2_PB_pbsv_7832:HG4_PB_assemblyticsfalcon_23761:HG2_Ill_breakscan11_3801:HG4_PB_SVrefine2PBcRDovetail_3862:HG4_PB_SVrefine2Falcon1Dovetail_4788:HG4_Ill_SVrefine2DISCOVARDovetail_5689:HG3_PB_SVrefine2PBcRDovetail_3580:HG3_Ill_SVrefine2DISCOVARDovetail_5876:HG2_PB_SVrefine2PBcRplusDovetail_10080:HG2_PB_SVrefine2PB10Xhap12_5681:HG2_PB_SVrefine2Falcon2Bionano_3850:HG2_PB_SVrefine2Falcon1plusDovetail_10849:HG2_Ill_SVrefine2DISCOVARplusDovetail_11785;NumClusterSVs=44;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10111:HG2_Ill_250bpfermikitraw_10755:HG2_Ill_Cortex_8143:HG2_Ill_GATKHCSBGrefine_5393:HG2_Ill_GATKHC_12842:HG2_Ill_Krunchall_11033:HG2_Ill_SpiralSDKrefine_15476:HG2_Ill_svaba_9955:HG2_PB_HySA_14293:HG3_Ill_150bpfermikitraw_10161:HG3_Ill_250bpfermikitraw_10454:HG3_Ill_Cortex_3367:HG3_Ill_GATKHCSBGrefine_5314:HG3_Ill_GATKHC_12824:HG3_Ill_Krunchall_10754:HG3_Ill_Spiral_8424:HG3_Ill_manta_1832:HG3_Ill_svaba_10051:HG3_PB_assemblyticsfalcon_24174:HG4_Ill_150bpfermikitraw_10313:HG4_Ill_250bpfermikitraw_10757:HG4_Ill_Cortex_3349:HG4_Ill_GATKHCSBGrefine_5477:HG4_Ill_GATKHC_12912:HG4_Ill_Krunchall_11361:HG4_Ill_manta_1930:HG4_Ill_svaba_10072;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0650406;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.176;PBcalls=14;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=61;DistBack=-22;DistForward=2762;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=59;REFWIDENED=7:2042639-2042697;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4926.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:57:./.:0:7:2:5:./.:0:0:0:0:1/1:0:51:./.:.:.:.:.:.
chr7	6131684	HG2_Ill_GATKHCSBGrefine_5421	C	CTTCTTCTTCTTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTT	20	PASS	ClusterIDs=HG4_PB_pbsv_7917:HG2_Ill_GATKHC_12915:HG4_Ill_GATKHC_12990:HG2_Ill_GATKHCSBGrefine_5421:HG4_PB_HySA_11588:HG2_PB_pbsv_7882;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5421:HG2_Ill_GATKHC_12915;NumExactMatchSVs=2;ClusterMaxShiftDist=0.229508;ClusterMaxSizeDiff=0.229508;ClusterMaxEditDist=0.229508;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=372;DistForward=87529;DistMin=372;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=196;REFWIDENED=7:6131613-6131808;PctSeqSimilarity=0.9858;PctSizeSimilarity=0.9672;PctRecOverlap=0.2459;SizeDiff=-2;StartDistance=45;EndDistance=45;GTMatch=0;TruScore=73;MatchId=4931.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:18:./.:24:7:7:7:./.:0:0:0:0:0/1:4:18:./.:.:.:.:.:.
chr7	6352709	HG3_Ill_SVrefine2DISCOVARDovetail_5914	T	TTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAA	20	PASS	ClusterIDs=HG2_PB_pbsv_7883:HG3_PB_assemblyticsfalcon_24238:HG3_PB_SVrefine2Falcon1Dovetail_4750:HG3_PB_HySA_11953:HG2_PB_assemblyticsfalcon_24400:HG3_PB_SVrefine2PBcRDovetail_3611:HG3_Ill_SVrefine2DISCOVARDovetail_5914:HG3_Ill_MetaSV_4770:HG2_PB_SVrefine2Falcon1plusDovetail_10881:HG2_PB_HySA_14394:HG3_PB_pbsv_7661;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_MetaSV_4770:HG3_Ill_SVrefine2DISCOVARDovetail_5914:HG3_PB_SVrefine2PBcRDovetail_3611;NumExactMatchSVs=3;ClusterMaxShiftDist=0.139241;ClusterMaxSizeDiff=0.139241;ClusterMaxEditDist=0.228228;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=166;DistBack=-1;DistForward=854;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=180;REFWIDENED=7:6352544-6352723;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4932.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:23:0|1:28:0:5:32:./.:0:0:0:0:0/1:28:18:./.:.:.:.:.:.
chr7	7107764	HG2_PB_PB10Xdip_28674	A	TATTGTTTGTAATATCAAGGGGGAGATGATACTACTCCAATGTTGCAGGGGTGTACACCCTCTGTGATAATGTTCTTAATATCCAAGGGGGAAATGATACTACTCCCAATGTCGCAGAGCATGTACATCCTCTGTGA	20	PASS	ClusterIDs=HG3_Ill_250bpfermikitraw_10505:HG2_PB_PB10Xdip_28674:HG3_PB_pbsv_7670;NumClusterSVs=3;ExactMatchIDs=HG2_PB_PB10Xdip_28674;NumExactMatchSVs=1;ClusterMaxShiftDist=0.070922;ClusterMaxSizeDiff=0.0567376;ClusterMaxEditDist=0.198582;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=136;DistBack=140;DistForward=376;DistMin=140;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1455;REFWIDENED=7:7107481-7108935;PctSeqSimilarity=0.9815;PctSizeSimilarity=0.951;PctRecOverlap=0.2587;SizeDiff=-7;StartDistance=103;EndDistance=103;GTMatch=0;TruScore=73;MatchId=4934.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:28:./.:22:10:19:17:./.:0:0:0:0:./.:43:5:./.:.:.:.:.:.
chr7	8019011	HG2_PB_SVrefine2Falcon1plusDovetail_10886	C	CAGAAATATGCTATTGTGGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGTCCACGGCAGGGTACTTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACAGAAAGGACATCTACACCGAAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGGCCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCAGATCTCTCGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATTTCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGAAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAGCCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTATCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACAACAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATGTCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAATCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTGCGGGGAGTGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10886:HG3_PB_assemblyticsfalcon_24256:HG3_PB_SVrefine2Falcon1Dovetail_4760;NumClusterSVs=3;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10886;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0064607;ClusterMaxSizeDiff=0.0064607;ClusterMaxEditDist=0.0109335;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6049;DistBack=2900;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=7:8019012-8019027;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9992;PctRecOverlap=0.999;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4935.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:39:0|1:24:0:0:38:./.:34:0:0:3:0/1:35:12:0/1:221:660:.:6011:.
chr7	8372310	HG3_Ill_SVrefine2DISCOVARDovetail_5927	A	ATCTTTAATATCTTTTGAAAATGCTATATCATTCTCTGTATACAAGTCTTATGTATCTTTTATTAGATTAATTTCTAAATTTCTAAGGATTTGAGTTGTAGATGCTATTGTAGACTACAATACTTCATTGTTTTAAAACTTAATTTTCCAGTTTTTTGATGCTGGGGTAGAGAAATACAACTGGTTTTGACTTGGTATTCAGTCAAGTGACCTGCTAAATTTACTTTTTAATTTCTATAACTTATTTACAGATTCTTTGGATTCTCTACATTCTCAATTATGTTGTCTGTGGATAATGACAGCTGTATTTCTTCCAGTCTCCCCTTAGCCCAAAGGTGGAGCTCTTTGAGGTCCCAGTCTAAAGTAGAAGAGGGTGATTTAGCCAGTTCCTTAAACTTGGTGGGTCTTGGACTCTTACTTTGGTCTCCCCAGACCTTCAAGGCTGCTATTGTGCAATGGAGTCTCTTAGCTGTCTCTTCCAGATAGACAAAAGCTAACAGATGAAAGCTGCCTCTGAGTTCTCTCTTCTTTAAATCTTGACCTGGTTTTTCCTTACTGTTTTGTTAGCTCTTTGATGCTTTTATTTATTTATATACTTTTTTTTTTCTTTTTTGAGATAGTCTTACTCTATCGCCCAGGCCAGAGTGCAGTGGCACAATCTCGGTTCACTGCAACCTCCATCTCCTGGGTTCAAGCCATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGAATTACAGGCCTGCACCAGCACACCCAGCTAATTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATATTGGCCAGGCTGATCTTGAACTCCTGACCTCAAGTGATGTGCCTGCTTCAGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGCGCCCAGACTCTTTGATGCTTTTAAAAATCTGTTTAAAATATTTTTAAAAATTTAATAACATTAAAAATATTTCATCCAGTATTTTTCAATTTGTCTTCAGTGAAAATATTGTATTAATTACCTAGCCTGCTATTACTAAAAGCAGAAGTTCATTGGATATTTTTCTATGGCAGCCTTGGGAAAGAAAAGATGGCAGGTTTCAGGACTGAATTCTTAAGTCTATTTGGGAGCAAAGAGATGAGTCATGGATGACGAGGCCTGACAGAGCCAGGTCAGAATGACCTTCTGGCTTTTGCCGTGCTCTGGGATTGCAATGCTCATGGACAAAGCTAAAATTGTAGAACCTTGTATACTGGGAATGGGTGTAAGAAATACTCCTGAGTGCCCGTGGAAACACCTTTCTTATCTATGCTAAACATAGTTGATTGGTGTTCACCCAAAGCTGCTTTCCTTCAAGCATTCATGTTTATTTTTAATCCCTGGGACTGCAGTGTCACATGAGAGTCAGTTCAAGGAAGTGAAATTGAGTTCTAAATTGGATAGTATAGATGAGCAGATATGAACATGATAGAAAAGGCCTTTTACATGTTTAGAGACCAAGGATTCATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGAGACAGGGTCTCCCTCTGTCACCCAGCCTGGAATGCTGTGGTGTGAACACAACTGCAGCCTTGACCTGCTAAGCTGAAGTGATCCTCCTGCCTCAGCCTCCTGGCTTCCTGAGTAGCTGGGACCACGGGTGCACATCACCATGCCTGGCTAATTTGTGTATTTTTTGTAGAGACCTGGTCTCAGCATGTTGCCCAGGCTGGTCTCAAACTCCTGGGCTCAAGCAATTCTCCCACCTTGGCCTCCCAAATTATTGGAATTGTAGGCACAAGCCACTGCACCTGGCTGAAATCATTTGCTGAGTAGACTTATTTATTTCACAGCATTTGCTAAGTCATATCTACAAATACAGTCATGTGTCCTTTAACAATGGGGATATGTCCTGAGAAATTCATTATTAGGCAATTTTGTCGTTATGTGAGCATCATAGAGTATATTTACACAAACCTAGATGGTATAACATACTATACATTTAGGCTATATGGGATAGCCTATTGCTCCTAGGCTCCTAACCCATATAGCATATTACTGTACTGAATACTGTAGGCAGTTGTAACACAGTAGTATTTATGTATCTAAACATATCCAAACAAAGAAAGCAAAGTAAAAATACTGTATTGTAATCTTATGGGGCCACCGTTGCCTGTGTGGTCTGTTGTTGACCAAAATGTCATTATGTGGTGAATGACTGCAGTTGGCACACAGAAATAATTCTGCTGTATGGGGACTTAACTTGAAATGGTATTTATTATATGATATTTATTATAATGGATTTTTAGCTATCATAATTCTGGGCTGGGTTTTCCATATATAATATGCATTCTGATGAGATTCCATCTGAAAACATGATACAAAACCTTATGCTAAGCAGCACACTTTAGGAAGGACTGAATCCAGTCATAGACCATCGCTGAGTTTCTTAAAATGTTGCTCCTCCCCGGCCAGGCACAGTGGC	20	PASS	ClusterIDs=HG2_PB_HySA_14415:HG4_PB_pbsv_7923:HG3_PB_pbsv_7678:HG4_PB_HySA_11604:HG2_PB_pbsv_7894:HG3_PB_SVrefine2Falcon1Dovetail_4763:HG4_PB_SVrefine2PBcRDovetail_3887:HG4_Ill_SVrefine2DISCOVARDovetail_5724:HG3_Ill_SVrefine2DISCOVARDovetail_5927:HG2_Ill_SVrefine2DISCOVARplusDovetail_11830:HG4_PB_SVrefine2Falcon1Dovetail_4826:HG2_PB_SVrefine2PBcRplusDovetail_10118:HG2_PB_SVrefine2Falcon2Bionano_3882:HG3_PB_HySA_11971;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11830:HG3_Ill_SVrefine2DISCOVARDovetail_5927:HG4_Ill_SVrefine2DISCOVARDovetail_5724:HG4_PB_SVrefine2PBcRDovetail_3887;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0716232;ClusterMaxSizeDiff=0.0708447;ClusterMaxEditDist=0.24928;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=2480;DistBack=46255;DistForward=42937;DistMin=42937;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=7:8372311-8372312;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4936.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:60:0|1:39:0:0:49:./.:0:0:0:0:0/1:22:29:0/1:86:180:.:2461:.
chr7	8838210	HG4_Ill_250bpfermikitraw_10827	T	TTTATGTATTTTTATGTTTATGAAATGTTTATGAAATGTTTATGAAAATTTTATGTTTATGAAATGTTTATG	20	PASS	ClusterIDs=HG2_PB_pbsv_7897:HG4_Ill_manta_1941:HG4_Ill_Krunchall_11432:HG2_Ill_Krunchall_11103:HG4_Ill_Cortex_3366:HG2_Ill_manta_2258:HG2_Ill_SpiralSDKrefine_15533:HG2_Ill_Cortex_8173:HG4_Ill_svaba_10144:HG4_Ill_250bpfermikitraw_10827:HG4_Ill_150bpfermikitraw_10386:HG2_Ill_svaba_10024:HG2_Ill_250bpfermikitraw_10826:HG2_Ill_150bpfermikitraw_10176;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10176:HG2_Ill_250bpfermikitraw_10826:HG2_Ill_svaba_10024:HG4_Ill_150bpfermikitraw_10386:HG4_Ill_250bpfermikitraw_10827:HG4_Ill_svaba_10144;NumExactMatchSVs=6;ClusterMaxShiftDist=0.232558;ClusterMaxSizeDiff=0.232558;ClusterMaxEditDist=0.310078;PBcalls=1;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=7;DistForward=9;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=7:8838209-8838211;PctSeqSimilarity=0.979;PctSizeSimilarity=0.9577;PctRecOverlap=0.9718;SizeDiff=3;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=96;MatchId=4937.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:0|1:36:2:2:23:./.:0:0:0:0:0/1:31:36:./.:.:.:.:.:.
chr7	9090957	HG2_PB_PB10Xdip_29115	T	AAAAGAATTTATCTGTGTATAAAGAAAACAATAGTAGGAATTTTGTAATAACAAAAAGGAAGAAAGTACCTGGGAAGCAAAAACATGGTTAAATATAAACTCTTCCTCCTCTTGAATTTTCTAAATTATGTTTGACTGTTGAAGCAAAAATTACAACACTGATGTGGTTCTAAATATATACAAAGGAAATATTTAAAGCTATTTTATTATAAATGGCAAAGATAATGGATATATAGGTTTGTTTCTACATTGAACTGGCAAAATAACACTAGGAGACTGTTTTATGCTATGAATATGTAATGTAATCAATAGAGCAACTACTAAAAGAAAGCTATAGAAAGAAATACACTCCCAACCACGGTGATAAATTTTAAAAAAATCTTTAAAATGTTTAACGCCATAGAAATGTAGAGAAAAAAAAAAGAAGAAGAAAAAACTAAAAGACCAAGCAGTAAACACAAAATTAGAATGGCTGACTTAAGCCTTAATCTAATAATTACTTTAGATCTAAGTGGGCTAATATACAAAAAACTGACGTTAGTATAGTACATTTTAAATCAGGGGAAACCAAACAACGAAAAATATAGGACAATTTGACAATCCTCAATTTTAGTTGTTTTCAAAGATATGTTAATTAAAACAATACTTTAAAATTATATAACTCTCAGCAAACTATCGCAAGGACAAAAAAACACCGCATATTCTCAGTCATAGGTGGGAACTGAACAATGAGAACACTTGGACACAGGAAAGGGAACATCACACAATGGGGCCTGTCGTGGGGGTGGGGGGAGGGGGAAGGGATAGCATTGGGAGATACACCTAATGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACCCTAGAACTTAAAGTATAATAATAAAGGAAAAAATAAAATTATATAACTCAAAATATTTTGGGATGGAAAACATTTTAAATATAATACCTATATTCAGAGTTAATATAAAATCAACATTTTCACAATGATATTTAAATTACGAATACATTTTTTAAAAGCCAATTAAACATATATAATGTTGTTACCATTTGATTGCGATAATTCTGCATTAACAATTGACCATAGAAAATTATTAGAGAAATGGATGAAGGATTTGTGTGGGATACAAGAGTGAACAATAAATGACCGTGAATTTTTTGTCATCAAATTATAGTACGTTTCTAATCATTTTAACAGTGTTACTTATAAAGTTTGAAGAAATGTGTGTAAGAGTAAGACACTGATTAAGGCTATGCACAGCAGCTTACGCTTGTAACTCCAGCCCTTTGGGAGGCTGAGGTGGGAGGATCACTTGAGGCCAAGAGTTCGAGAGCAGCATGGGTAACATAGTGAGACCCTGTTTCTACAAAAATAAAAAATTAATAAAGTGTGGTGGTTCATTCCTGTAGTCTCAATTACTTAGGAAGCTAAGATGGGGGAGGATCACTTGAGTTAGGGAGATCCAGGCTGCAGTGAGCTGTGATTGCACCACGCACTTTAGTCTTCATTACAGAGTAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGATGAAAAAGAAAACCTGATCATCAAATAAGTTATACATCTATACTGTAGAGTAATGCTTCTGTTAAACATTGTTTTTAAACAACCGTAATTAACATGAAAATAAATCAGAACATAAATTACTACATTTGATATGAAACTATTAGTATTATATATGTAAAAATATACCTTTTTCTCTGTCTTAAGTAAATGATATAACAGTCAGTAAAAATTAGCATGTATAAGTATTTGTTTTCCTTTTGTGATAATTTGCAATTATACATTTTTGATGTATTGAAGTATTCATATTTACATGTTCATATGACACACATAAGTTTTATGTTTAGGAAAAAATTAAAAACAGATAAAGAGATTGGGTAAATAAACTGATACATTTTACATGATAGAAAAACTAAAAATTATTAAAGTTTTCTCTAGACAATGTTATAGGTAATTTTTCATTTTTCTTTTTCTCTATGTGTAAACAATTATAAATATTTTATACAATCCTATTTAACTTAGAAATACTTGAAAAATTGTTTTGTTTTCATTTTGTGTTGCTAGGTTTTCATTCCTCATTGAAAGTTAGATACAATTTGCAGTAGCCATTATGTCCCTTCACAAATATTTATTTTGTCTTACATTTTCTTTTTTTTTTTTTTTTTTTGAGTTAAGGTCTCACTGTATCACCCAGGCTGGAGTGCAGTGGCATGATCTCAGTGTAGCTAGCCTCAACCTCCCGAGCTCAAATGATCTCCTGCCTTAGCCTCCTAAGTAACTAGGACAACAGGTGTATGCAACCACACCCAGCTAAATTTTCTATTTCTTGTAGAAACAAGATTTCACCATGTTGCCCAGGCTGGTCTCGAACTCCTGGGCTCATGATTCATCCACTTCGGCGTCCCAAAGTGCTGGGCTTACAGGCATGAGCCATGAGCCATGAGCCACTGCACCTGGCCTGTCATATATTTGCTTCCAGTTATGTTGTAAGTTTGTTGTTTCCATTTCCACTGAACTCAGATATGGCTGTGTGACTTGTGGTTCATTATATGTAAGTGTAATAGTCATGTGTTATATGACAACAAAGAACACCAATTGTTACAAAAGCTGCAATAATAGGTAAATAAAAACAACAAAATCTATGTATTTGTAAAGGTTCCCAATATTTAGAACCATACTGTCTTTAAAATATTGATTAAAGTGTTTACATAATAAGTATTCTGGCATTTGCTACATTGAATCATTGATTTTTCCCCACATAATGATTTTATAAATCTCCTCCCTTCAGGGCTAAAGATTTATAATCTTGTATTACAAGGGTTTTGTGTCTCCAGGAAACTGAATATATGGCACATGCCACTAATTCAGTTTGTCATTTAGCTTCCCATCTGCCTTCTGTTTTCATCTCTACAAAGTTCCAGTGTTGATCCGCATGTTTCAGGTGTCAGTCAATATGAACAGCAATCCTTGGAGGATACAGCTTTGAACTTACATAAAGGCTCTGTCTCATCAGGCTTAAGTTGTCCCTGCATCGATGACTTTAAGGGCTGTGACTCACTATGTGTTGCAAACGTCTCCTTCTGCCTGTCATTTTCAGTTAACAGAGGCATCCTGTCAGCTCTATGATAGAGTAATGCCTTCTGTAACTCTCTTAGGAGATCATTTATGTTCTAGGTTCTTGCTAGGCTTTTATCATTGTTTACTTTAAAAATAAGTGTAGTTCTGAAGATCTAGACATGAAGTCATTGCAGATAAAAAAAAGAAGTCTGTATCATCTCTGCTTTGACTACACAAAATATCTGTATAGAGATTTTAACTTTGTGGAGTCATAGGCACCCAAAATATATAGCTACATAAACACAGTTCTTAATTTTAAAAATTGATATAGTTTGGCTATATCCCCACCAAAATCTCATCTGGAATTCCCACATGTTGTAGGAGGGACCCAGTAATTGAATCACAGGGGCAAGTCTTTTCTGTGCTGTTCTCCTGATAGTGAATAAGTCTCAAGAGATCTGATGGTATTTATAAGAGGAGTTCCCCTGCACAAGCTCTCTTCTTACCTGCTGCCATCCCTGTAAGATGTAACTTGCTCCTCCATGGCCTTCTGCCATGATGTGTGAATCTTCCCCCAGCCATGTGGAACTGTAAGTCCAATTAAACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAAATTGCCCAGTCTTGGGTATGTCTTATCAGCAGCATGGAAACACTAATACAGTAAATTGGTACCAGTAGAGTGGTGTGCTGCTGAAAAGATACCTGAAAATGTTGAAGTGATTTTGGAACTCGGTAACAGGCAGAGGTTGAAACAGTTCAGAGGGCTCAGAAGAAGACAGGAAAATGTGAGAAAGTTTGGAACTTCGTAGAGACTTGTTGAATGGCTTTGCTCAAAATGCTGATAGTGACATGGACAATAAACTCCAGGCTGAGGTGGTCTCAGATGGAAATGAGGAACTTGTTGGGAACTGGAGCAAAGGTGACTCCTGTCACGTATTAGCAAATAGACTGTTGGCATTTTGCCCTCGCCGTAGAAATTTGCAGAACTTTGAACTTGAGAGAGATGATTTAGGGTATCTTGCAGAAGAAATTTCTAAGCAGCAAATCATCCAAGAGGTGACTTGGGTGCTGCTAAAGGTGTTCTGTTTTATAAGGGAAGCAGAGCATAAAAGTTCAGAAAATTTGCAGCCTGACAATGCAATAGAAAAGAAAATCTCATTTTCTAAGAAATTCAAGCCAGCTACAGAAATTACATAAGTAATGAAAGCTGGAAGTTAATCCCCAAGACAAAGGGGAAAATGTTTCCAGGGCATGTCAGAGGTCTTCACAGCAGCGCCTCCCATCACAGGCCTGAAGGGCTAGAGGAAAAAGTGGTTTCATGGGCCGGGCCCAGGGTCCCCATGCTGTGTGCAGTCTAGAGACTTGCTGCCCTGTGTCCCAGCAGCTCTGGCTGTGGCTGAAAGGGTCCAATGTAGAGCTCAGGCCATGACTTCAGAGGGTGCAAGTCCCAAGCCTTGGCAGCTTGCATGTGGTATTGAACCTGCAAGCATACAGAAGTCAAGAATGAAGGTTTGGGAACCTCCTCCTAGATTTCAGAGGATGTATGGGAACACCTGGATGCCTAGGCAGAAGTTTGCTGCAGCGGTGGGGCCCTCATGGAGAACCTCTGCTAGGGCAGTGCAGAAGGAAACTCTGGGATCAGAGCCCCCACACAGAGTCCTTACTGCAACACTACCTAGTGGGGCTGTGAGAAGAGGGCCACCATTCTACAGACACCGTAATGGTAGATCCGCTTGAATTTCTTGCACTGTGCACCTGGAAAAGCCACAGACACTAAACACCAGCTCATGAAAGAAGCCAGGAGGGAGGCTGTACCCCCTGCAGGGCCAGAGCTGCCCAAGACCATAGGAACCATCTCTTGCATCAGCGTGACCTGGATGTGAGACCTGGAGTCAAAAGAGATCATTTTGGAACTTTAAGATTTGACTGTCCTGCTGGATTTCAGAATTGCCTAGGGCCTGTAGCCCCTTTGTTTCAGACCATTTCTCCCATTTGGAATGGCTGTGTTTACCCAATGCCTGTACTTTCACTGTATCTAGAAAGTAACCTGCTTTTGATTATACAGTCTCATAGGTGAAAAGGACTTGTCTTGTCTCAGATGAGAGTTTTGACTGTGGACTTTTGAGTTAATGCTAAAATGAATTAAGACTTTGGGGGACTGTTGGGAAGGTATGATTGGTTTTGAAATGTGAGGACAAGAATGTGAGATTTGGGAGAGGCCAGGTGTGGAATGATATGGTTTGGCTGTGTCCCCATCCAAATCTCATCTTGAATTTCCATTTGTTGTGGGAGGGGCGCAGTGGGGGTTAATTGAATCATTGGGGCAAGTCTTTCCCATGCTGTTCTCATGATAGTGAATAAGTCTCATGAGATTTGTTTGTTTTAAAAAGAGGAGTCCCCCTGCACAAGCTATCTCTCTGCTTGCTGCCGTCCATGTATGACATGACTTGCTCCTTGCTTTCTGCCATAATTGTGAGGCTTCCCCAGCCACATGGAACTGTAAGTCCAATTAAACTTCCTTCTTTTGTAAACTGCCCATTCCTGGATATGTCTTTATCAGCAGTGTAAAATGGACTAACACAAAAATGTAACAACGAAAGCTCCTCATCCTTAAGTAAATGAATTTCTCCGATGGTAAAAGCTCCTGTCCTTGAGTTTTACATTGTGGAAACTAATTAATCATATGTGAAACTGCAACAATCAGTCATCCACAAAATTGTAAAGAAAGAAAAATGTTTCAACTGTTTCTTCTCCATTGAATTGTTTGGGGCCAATCTGCCCTTGATGCCAATAACTTTGTTCCCAAGCTGGCCTTTCGTTCCACAAATTCCCAACTTTTCTCTGCGTTGACACATAGGTTTCGCACATCAATCTAGAATTCAGTTCTTTACTAATCTTTGAGATAGTGTAACAGCAGAATATATTTATCCCAGACAACAGAATTTACGGAAGGGGATTTGAGGTTCTAGGCACTCAGATAAGGTGGATGTTTCTGATAGTACTTTGAATCTTAAGAATGTTTTAAATAAAACTAACCTTCAATAAAGGAGTATATGATTTGTATGGTCCTTACAAATATGACAGTCTTAGGTTGCACACTTTGATAGCTTAGAAAAGAATCATAATCTTAAATACAATACTTTTCAGGTGGTGCTTCAGATGTATGTGTATGGCTGCAGCACAGTGCAATGCCTGTCGTATTGTTGCTCTTAATACACAGTTGCTGTCTAAAAGAACAAGTCAAGAAATGAATGACTGAATAGCTCATGTAATGTGTAAGTTTGTGGCAGTTTTTACAGGTTTTTAGATAGTGCTTTATGTACTGCAGGATAGTCCTAAGCAAGTCTCTGATTTGGGTTAGCTTCCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10889:HG3_PB_pbsv_7684:HG2_PB_pbsv_7898:HG2_Ill_breakscan11_3805:HG3_PB_SVrefine2Falcon1Dovetail_4766:HG2_PB_SVrefine2Falcon2Bionano_3884:HG2_PB_SVrefine2PB10Xhap12_5731:HG2_PB_PB10Xdip_29115:HG2_PB_SVrefine2PBcRplusDovetail_10120:HG2_PB_PB10Xdip_29116:HG4_PB_SVrefine2PBcRDovetail_3889:HG3_Ill_SVrefine2DISCOVARDovetail_5933:HG3_PB_SVrefine2PBcRDovetail_3619:HG2_10X_SVrefine210Xhap12_5630:HG2_Ill_SVrefine2DISCOVARplusDovetail_11835:HG4_PB_SVrefine2Falcon1Dovetail_4830;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_29115:HG2_PB_SVrefine2PB10Xhap12_5731;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0454069;ClusterMaxSizeDiff=0.0449506;ClusterMaxEditDist=0.169134;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=6544;DistBack=0;DistForward=4589;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:9090958-9090956;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9991;PctRecOverlap=0.9991;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4938.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:1/1:1:29:0:27:./.:0:0:0:0:1/1:0:59:1/1:0:708:.:6257:.
chr7	11284847	HG2_Ill_150bpfermikitraw_10205	T	TAGGGAGTGAGTGGGAAAGAAGAAAACAGGCTAGGAAACCATTAATTGCTTC	20	PASS	ClusterIDs=HG2_PB_pbsv_7908:HG4_Ill_250bpfermikitraw_10862:HG4_PB_HySA_11639:HG4_PB_pbsv_7940:HG3_PB_pbsv_7692:HG4_Ill_150bpfermikitraw_10420:HG3_PB_assemblyticsfalcon_24285:HG3_Ill_manta_1849:HG3_Ill_Krunchall_10843:HG3_Ill_GATKHC_12931:HG3_Ill_GATKHCSBGrefine_5365:HG3_Ill_250bpfermikitraw_10540:HG2_Ill_manta_2260:HG2_Ill_250bpfermikitraw_10855:HG2_Ill_150bpfermikitraw_10205:HG2_PB_assemblyticsfalcon_24437:HG4_Ill_svaba_10180:HG4_Ill_manta_1945:HG4_Ill_Krunchall_11467:HG4_Ill_GATKHC_13047:HG4_Ill_GATKHCSBGrefine_5527:HG3_Ill_svaba_10147:HG2_Ill_svaba_10060:HG2_Ill_Krunchall_11132:HG2_Ill_GATKHC_12964:HG2_Ill_GATKHCSBGrefine_5439:HG2_Ill_FB_7065:HG2_PB_HySA_14437:HG3_PB_HySA_12000;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10205:HG2_Ill_250bpfermikitraw_10855:HG2_Ill_manta_2260:HG3_Ill_250bpfermikitraw_10540:HG3_Ill_GATKHCSBGrefine_5365:HG3_Ill_GATKHC_12931:HG3_Ill_Krunchall_10843:HG3_Ill_manta_1849:HG3_PB_assemblyticsfalcon_24285:HG4_Ill_150bpfermikitraw_10420:HG4_Ill_250bpfermikitraw_10862;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0761905;ClusterMaxSizeDiff=0.0754717;ClusterMaxEditDist=0.293578;PBcalls=8;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=10;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=7:11284848-11284850;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4941.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:4:23:0:13:./.:0:0:0:0:1/1:0:44:./.:.:.:.:.:.
chr7	12564038	HG2_Ill_250bpfermikitraw_10862	T	TCATTCATAGTAAATAATATATGTTACCTTTTAGAGATGAGGGAGGTCATGTAAATATTTC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_10862:HG2_PB_HySA_14444:HG4_PB_pbsv_7944:HG4_Ill_Krunchall_11477:HG2_PB_pbsv_7911:HG4_Ill_GATKHC_13055:HG4_Ill_GATKHCSBGrefine_5530:HG4_Ill_250bpfermikitraw_10870:HG2_Ill_Krunchall_11141:HG2_Ill_GATKHC_12971:HG2_Ill_GATKHCSBGrefine_5441;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10862:HG4_Ill_Krunchall_11477:HG4_Ill_GATKHC_13055:HG4_Ill_GATKHCSBGrefine_5530:HG4_Ill_250bpfermikitraw_10870:HG2_Ill_Krunchall_11141:HG2_Ill_GATKHC_12971:HG2_Ill_GATKHCSBGrefine_5441;NumExactMatchSVs=8;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.267717;PBcalls=3;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=38505;DistForward=2248;DistMin=2248;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=136;REFWIDENED=7:12564021-12564156;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4943.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:21:0|1:25:5:1:14:./.:0:0:0:0:0/1:27:18:./.:.:.:.:.:.
chr7	12953604	HG3_Ill_GATKHC_12942	T	TATATATATATATATATATATATATATATATATATATATATATACACACAC	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10215:HG3_Ill_Spiral_8500:HG3_Ill_GATKHC_12942:HG3_Ill_GATKHCSBGrefine_5371:HG3_Ill_150bpfermikitraw_10262:HG2_Ill_GATKHC_12976:HG2_Ill_GATKHCSBGrefine_5444;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10215:HG3_Ill_Spiral_8500:HG3_Ill_GATKHC_12942:HG3_Ill_GATKHCSBGrefine_5371:HG3_Ill_150bpfermikitraw_10262:HG2_Ill_GATKHC_12976:HG2_Ill_GATKHCSBGrefine_5444;NumExactMatchSVs=7;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=50;DistBack=16;DistForward=10250;DistMin=16;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=7:12953603-12953606;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4945.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:35:0|1:32:2:1:31:./.:0:0:0:0:0/1:20:12:./.:.:.:.:.:.
chr7	15463152	HG3_Ill_SVrefine2DISCOVARDovetail_5966	A	ATTTTCATTAACATGGTGTGGGAGACCCTGGCACCCAGTACCTCAGAATGTGTCCTTAATTGGAAATAGCATCTTTATAGAGGTAATCAAGTTAAAATGAGTTAATTAGGTGGGCCCTAATCCAGGAGGACTTGTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11868:HG4_PB_pbsv_7966:HG2_PB_HySA_14500:HG2_PB_pbsv_7934:HG3_PB_HySA_12052:HG2_PB_PB10Xdip_26784:HG2_PB_PB10Xdip_26783:HG2_Ill_MetaSV_4620:HG2_Ill_250bpfermikitraw_10898:HG3_PB_pbsv_7719:HG3_PB_SVrefine2PBcRDovetail_3641:HG3_Ill_SVrefine2DISCOVARDovetail_5966:HG2_PB_SVrefine2PBcRplusDovetail_10140:HG2_PB_SVrefine2PB10Xhap12_5761:HG2_PB_SVrefine2Falcon2Bionano_3901:HG2_PB_SVrefine2Falcon1plusDovetail_10917;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11868:HG3_PB_SVrefine2PBcRDovetail_3641:HG3_Ill_SVrefine2DISCOVARDovetail_5966:HG2_PB_SVrefine2PBcRplusDovetail_10140:HG2_PB_SVrefine2PB10Xhap12_5761:HG2_PB_SVrefine2Falcon2Bionano_3901:HG2_PB_SVrefine2Falcon1plusDovetail_10917;NumExactMatchSVs=7;ClusterMaxShiftDist=0.118881;ClusterMaxSizeDiff=0.111888;ClusterMaxEditDist=0.309278;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=135;DistBack=-135;DistForward=151;DistMin=-135;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=139;REFWIDENED=7:15463153-15463291;PctSeqSimilarity=0.9902;PctSizeSimilarity=1;PctRecOverlap=0.8741;SizeDiff=0;StartDistance=-17;EndDistance=-17;GTMatch=1;TruScore=95;MatchId=4946.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:1/1:./.:8:53:./.:6:17:1:19:./.:0:0:0:0:0/1:4:20:./.:.:.:.:.:.
chr7	15666275	HG2_PB_pbsv_7935	C	CAAGAATTCCCTGGGGCCGGGCGCGGTGGGCTCACGCCTGTAATCCGCCAGCACTTTGGAGGCCGAGGCGGGCGGATCACGAGGTTCAGGAGATCGAGACCATCCGGCTAAAACGGTGAAACGCCCGTCTCTTACTAAAAATACAAAAAAAATTAGCCGGGCCGTAGGGCGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTTGAGGCAGAGAATGGCGTGACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCGCCAACTGCAGCTCCAAGCCTGGGCGACAGAGCGAAGACCCGTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3918:HG4_PB_HySA_11694:HG4_PB_pbsv_7969:HG3_PB_assemblyticsfalcon_24342:HG2_PB_HySA_14505:HG2_PB_pbsv_7935:HG3_PB_SVrefine2Falcon1Dovetail_4794;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_7935;NumExactMatchSVs=1;ClusterMaxShiftDist=0.242424;ClusterMaxSizeDiff=0.239234;ClusterMaxEditDist=0.255183;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=333;DistBack=-85;DistForward=110;DistMin=-85;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=7:15666276-15666283;PctSeqSimilarity=0.9548;PctSizeSimilarity=0.988;PctRecOverlap=0.988;SizeDiff=4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4947.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:./.:7:11:20:4:./.:0:0:0:0:0/1:18:8:0/1:5:12:.:.:.
chr7	15853447	HG4_Ill_250bpfermikitraw_10908	A	ATATATATAATATATAATATATATTATATATAATATATATTATATAATATATATTATATATATATAATATATATTATATAATATATAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11870:HG3_PB_HySA_12061:HG2_PB_SVrefine2Falcon2Bionano_3902:HG4_PB_SVrefine2PBcRDovetail_3919:HG3_PB_SVrefine2PBcRDovetail_3642:HG3_Ill_manta_1860:HG3_Ill_GATKHC_12981:HG3_Ill_GATKHCSBGrefine_5393:HG2_PB_assemblyticsPBcR_23707:HG4_Ill_SVrefine2DISCOVARDovetail_5764:HG2_PB_SVrefine2PBcRplusDovetail_10141:HG2_PB_SVrefine2PB10Xhap12_5763:HG2_Ill_manta_2273:HG4_Ill_svaba_10225:HG4_PB_pbsv_7970:HG3_Ill_SVrefine2DISCOVARDovetail_5969:HG4_Ill_GATKHC_13098:HG4_Ill_GATKHCSBGrefine_5555:HG4_Ill_250bpfermikitraw_10908:HG4_Ill_150bpfermikitraw_10469:HG2_Ill_GATKHC_13016:HG2_Ill_GATKHCSBGrefine_5466:HG2_Ill_250bpfermikitraw_10905:HG2_PB_HySA_14508:HG3_PB_pbsv_7721:HG2_PB_pbsv_7936;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10905:HG2_Ill_GATKHCSBGrefine_5466:HG2_Ill_GATKHC_13016:HG4_Ill_150bpfermikitraw_10469:HG4_Ill_250bpfermikitraw_10908:HG4_Ill_GATKHCSBGrefine_5555:HG4_Ill_GATKHC_13098;NumExactMatchSVs=7;ClusterMaxShiftDist=0.371134;ClusterMaxSizeDiff=0.371134;ClusterMaxEditDist=0.371134;PBcalls=11;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=87;DistBack=29;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=124;REFWIDENED=7:15853369-15853492;PctSeqSimilarity=0.9638;PctSizeSimilarity=0.9255;PctRecOverlap=0.7579;SizeDiff=-7;StartDistance=-19;EndDistance=-19;GTMatch=1;TruScore=88;MatchId=4948.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:2:38:1:21:./.:0:0:0:0:0/1:8:23:./.:.:.:.:.:.
chr7	16129085	HG3_Ill_Krunchall_10897	T	TGTATATATGTACGTACATATATACGGGTATATATGTACGTACATATATACGG	20	PASS	ClusterIDs=HG3_PB_pbsv_7723:HG4_Ill_svaba_10229:HG3_Ill_svaba_10189:HG3_Ill_scalpel_7789:HG3_Ill_manta_1862:HG3_Ill_Spiral_8532:HG3_Ill_Krunchall_10897:HG3_Ill_GATKHC_12982:HG3_Ill_GATKHCSBGrefine_5395:HG3_Ill_250bpfermikitraw_10589:HG3_Ill_150bpfermikitraw_10301:HG2_PB_assemblyticsfalcon_24492:HG2_Ill_svaba_10095:HG2_Ill_scalpel_7678:HG2_Ill_manta_2275:HG2_Ill_SpiralSDKrefine_15593:HG2_Ill_Krunchall_11183:HG2_Ill_GATKHC_13019:HG2_Ill_GATKHCSBGrefine_5468:HG2_Ill_250bpfermikitraw_10908:HG2_Ill_150bpfermikitraw_10253:HG2_PB_HySA_14512:HG2_PB_PB10Xdip_27148:HG2_PB_PB10Xdip_27147:HG3_PB_HySA_12063:HG2_PB_pbsv_7938;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10253:HG2_Ill_250bpfermikitraw_10908:HG2_Ill_GATKHCSBGrefine_5468:HG2_Ill_GATKHC_13019:HG2_Ill_Krunchall_11183:HG2_Ill_SpiralSDKrefine_15593:HG2_Ill_manta_2275:HG2_Ill_scalpel_7678:HG2_Ill_svaba_10095:HG2_PB_assemblyticsfalcon_24492:HG3_Ill_150bpfermikitraw_10301:HG3_Ill_250bpfermikitraw_10589:HG3_Ill_GATKHCSBGrefine_5395:HG3_Ill_GATKHC_12982:HG3_Ill_Krunchall_10897:HG3_Ill_Spiral_8532:HG3_Ill_manta_1862:HG3_Ill_scalpel_7789:HG3_Ill_svaba_10189:HG4_Ill_svaba_10229;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0934579;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.144144;PBcalls=7;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=10657;DistForward=42;DistMin=42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=45;REFWIDENED=7:16129084-16129131;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4949.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:37:1|0:2:39:18:1:./.:0:0:0:0:0/1:26:24:./.:.:.:.:.:.
chr7	16747711	HG2_Ill_GATKHCSBGrefine_5469	C	CTCCTGCCTCAGCCTCCGTTTGAAAAATCATCTATATGTGAGAATGCTATTTTCATTGCACAAGAAATAATGACAGGACAACTGTGGCCAAGAAGAAAGTCATAGAATAAAGAGCTTATGTCACCTTGGAGTGCTTAGCATAGTCCTGGAGGTAACATATATATTCTGTCCTAAAATTGACCTACTGGATGATGTCCCTCTTTCATATGCTGATTTTCCTTCCCGGACTTCCCCTTCATGGTTGGCTTCCTCCTATTTTATAAAAGAAAGTACTAATGCATCCATTCCAATATGGTACACTGCCCCAAGGATGACAAGCACATGGCATTAAACAAAGGGACAGTTCTAGAATGTGTGGCTCTTTTAGGCTAGTCCCTTGAGAGAAAAGCTGGAAACTGATGGGAGAGGTGGCTGATTTCTAACAGGCCATCAATTCGTGGCAAGTCTCCATTATCTATCTACTCTTCCATCTGTCTTTTTTTTTTTTTTTTAGAGACAGAGTCTTGCTCTGCCACCCAGGCTGTAGTGCAGTGGCACTATCTTGACTCACTGCAACCTCTGCCTGGGTTCAAGCGATTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4862:HG3_PB_pbsv_7725:HG2_PB_pbsv_7940:HG3_Ill_MetaSV_4796:HG3_Ill_GATKHCSBGrefine_5396:HG2_Ill_MetaSV_4623:HG2_Ill_GATKHCSBGrefine_5469:HG3_PB_HySA_12065:HG2_PB_PB10Xdip_27150:HG2_PB_SVrefine2PB10Xhap12_5766:HG2_PB_SVrefine2Falcon1plusDovetail_10921:HG2_PB_SVrefine2Falcon2Bionano_3904:HG2_Ill_SVrefine2DISCOVARplusDovetail_11877:HG2_10X_SVrefine210Xhap12_5662:HG3_PB_SVrefine2PBcRDovetail_3645:HG3_PB_SVrefine2Falcon1Dovetail_4797;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5469:HG2_Ill_MetaSV_4623:HG3_Ill_GATKHCSBGrefine_5396;NumExactMatchSVs=3;ClusterMaxShiftDist=0.142114;ClusterMaxSizeDiff=0.138648;ClusterMaxEditDist=0.207075;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=578;DistBack=-17;DistForward=24305;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=127;REFWIDENED=7:16747602-16747728;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4950.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:22:0|1:22:0:1:26:./.:0:0:0:0:0/1:25:12:0/1:14:53:.:.:.
chr7	17094700	HG2_Ill_breakscan11_3807	T	TAAAACAATTGTTCAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGAATATCACACTCGGGACTGTGGTGGGGTCGGGGGAGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACTTTAGTGGGTGCAGCGCACAAGCATGGCACATGTATACATATGAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACATAAAAAAAAAAAAAAAAACAACAAAACAAAGCAAACATGGAAATGTTTGTTATTTTAATTGTTATGATGGTTTCATGGCTGTTTGCATGTGTCAAAACTCATCAAATTTGTGTACGTTAAATATGTGAAACTTATTGTATGCTGGTTACACCTCAATAAAGCTGTTAAATTTAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3807:HG2_PB_pbsv_7944:HG4_PB_pbsv_7975:HG4_PB_assemblyticsfalcon_23938:HG2_PB_assemblyticsfalcon_24501:HG3_PB_assemblyticsfalcon_24354:HG2_PB_HySA_14518:HG2_PB_SVrefine2PB10Xhap12_5769:HG4_PB_HySA_11703:HG2_PB_HySA_14517:HG2_PB_SVrefine2Falcon2Bionano_3907:HG4_Ill_MetaSV_4830:HG2_PB_SVrefine2Falcon1plusDovetail_10924:HG3_PB_SVrefine2Falcon1Dovetail_4800:HG4_PB_SVrefine2Falcon1Dovetail_4865;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_breakscan11_3807;NumExactMatchSVs=1;ClusterMaxShiftDist=0.169417;ClusterMaxSizeDiff=0.165017;ClusterMaxEditDist=0.20242;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=478;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=7:17094701-17094700;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9856;PctRecOverlap=0.9876;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4951.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:34:0|1:34:1:1:29:./.:0:0:0:0:0/1:25:15:0/1:12:32:.:.:.
chr7	19518323	HG2_PB_PB10Xdip_27161	CAACT	GTAGCTGTGCACAGTGGAGCGAGGGAGGCATAGAGTGGTGTTTACTTTCATGATGTTCGGCCAGAGTAGAGCGAGTGTAGTCAAAAAGATTTTTTTAAAATTATACTTTAAGTTCTGGGTTACATGTGAAGAATATGCAGTTTTGTCACATAGGTATACATGTGCTCTGGTGGTTTGCTGTACCCATTAACCCATCACCTACATTAGGTATTTCTCCTAATGTTACCCTCCCCTAGCCCCCGACCCCCGACAGGCCCCAGTGTGTGATGTTCCCCTCCCTGTGTCCATGTGTTTTCATTGTTCAACTGCCACTTACGAGTGAGGACATGTGGTGTTTGGTCTTCTGATCTTGTGATAGCTTGCTGGGAATGATGGTTTCCAGCGTCATCCATGTCCCCGCAAAGGACATGAACTCATCCTTTTTTGTGGCTGCATAGTATTCCATGGTGTACATGTGCCACATTTTCTTAATTCAGTCTATCATTGATGGACATTTGGGTTGGTTCCAAGTCTTTGGTATTGTGAATAGTGCCACAATAAACATGTGTGCATGTGTCTTTATAGCAGCATGATTTATAATCCTTTGGGTATATAGCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCTAGAGGAATCTCCACACTGTCTTCCACAATGGTTGAACTAGTTTATAGTCCCACCAACAGTGTAAAGGTGCTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGCGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGGATTTTTTCATGTGTCTCTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTTGCCCACTTTTTGATGGGGTTGTTTGATTTTTTTCTGGTAAATTTGTTTAAGTTCTTTATGGATTCTGGATATTAGCCCATTGTCAGATGGTTAGATTGTAAAAATCTTCTCCCATTCTGTAGGCTGCCTGTTCACTCTGATGGTAGTTTATTTTGCTGTGCAGAAGCTCTTTCGTTTAATTAGATGCCTTTTGTCAATTTTGGCTTCTGTTGCCATTGCTTTTGGTGTTTTAGTCATGAAGTCCTTGTCCATGCCTGTGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATGATTTTAGGTCTAACATATAAGACTTTAATCCATCTTGAATTAATTTTTGTGTAAGGTGTAAGGAAGGGATCCAGTTTCAGCTCTCTACATATGGCTAGCCAGTTTTCCCAGTAGCATTTATTAAATAGGGAATCCTTTCCCCATTTCTTGTTTTTGTCAGGTTTGTCAACGATCAGGTGATTGTAGATGTGTGGTATTATTTCCGAGGGCTCTATTCTGTTCCATTGGTCTATATCTCTGTTTTGGTACCAGTACTATACTGTTTTGGTTACTGTAGCCTTGTAGTATTGTTTGAAGTCAGGTAGCATGATGCCTCCAGCTTTGTTCTTTTTGCTTAGGATTGTCTTCAGTATACAGGCTGTTTTTTGGTTCCATATGAAATTGAAGATAATTTTTTCTAATTCTGTGAAGAAAGCCAATGGTAGCTTGATGGGTATAGCAATGAATCTTAAATTACTTTGGTGAGTATAGCCATTTTCACAATATTCATTCTTCCTATCCATGAGCATGGAATGTTTTTCCATTTGTTTGTGTCTTCTCTTCTTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAAGTCCTTCACATCACTTAGTCCTTCACATCCCTTGTATGTTGTATTGCTAGGTATTTTCTTATCTTTGTAGCAATTGTGAATGGCAGTTCACTCATGATTTGGCTCTCTTATTGGTGTATAGGAATAACTGTGATTTTTGCACACTGTGTATCCTGAGACACTGCTGAAGTTGCTTATCAGCTTAAGGAGACTTTGCGCTGAGACGATGGGATTTTCTAAATATACAATCATGTCATCTGCAAACAGAGACAATTTGCCTTCCTTTCTTCCTGTGTGAATACCATTTATTTCTTTCTCTTGCCTGATTCCCTGGACAGAACTTCCAATTCTATGTTGAATAGGAGTGGTGAGAGAGGGCATGCCTGCGTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATTTTGGCTGTGCATTTGTCATAAATAGCTCTTACTATTTTGAGATACATCCCATCAATACCTAGTTTATTGAGAGTTTTTAACATGAAGCGCAGTTGAATTTTGTCGAAGGCCTTTTCTGCATCTATTGAGATAATCATATGGTTTTTGTCGTTGGTTCTATTTATGTGATGGATTACGTTTATTGATTTGTGTATGTCGAACCAGCCTTGCATCCCAGAGATGAAGCCAACTTTATCATGTTGGATAAGCTTTTTGATGTGCTGCTGGATTCAGTTGCCAGTATTTTATTGAGGATTTTTGCATCGATGTTCGTCAGGGATATTGCTCTAAAATTCTCTTTTTTTGTTGTGTCTCTGCCAGGCTTTGGTATCAGGGTGATACCGGTCTCATAAAATGAATTAGGGAAGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCGGAAGGAATGGTACCAGCTCCTCTTTGTACCTCTGGTAGAACTTGGCTGTGAATCTATCTGGTCCTGGACTTTTTTTGGTTGGTAGGCTATTATTTATTGCCTTAATTTCAGAACCTGTTATTGATCTATTCAGGGATTCAGCTTCTTTCTGGGTTAGTCTTGGGAGGGTATATGTGGCCTGGAATTTTTCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAAGTGTTTATAGTGTTCTCTGATGGTAATTTGTATTTCTGTGGGATCGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTCTTCTTTATTAGTCTTGCTAGCAGTCTATCAATTTTGTTGATCTTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTTTTTTTTGAAGGGTTTTTTTGTGTCTCTATTTCCTTTAGTTCTGCTCTGATCTTAGTTATGTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTCTCTAGTTATTTTAATTGTGATGTTAGGGTGTCAATTTTAGATCTTTCCTGCTTTCTCTTGTGGGCATTTAATGCTATAAATTTCCCTCTACACACTGCTTTAATGTATCCCAGAGATTCTGGTATGTTGTGTCTTTGTTCTCACTGGTTTCAAATAACATCTTTATTTCTGCCTTCATTTTGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGTGGTTTTGAGTGAGTTTCTTAATCCTCAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGTGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAAATGTGATGTGGAGCTGAGAAGAATGTATATTCTGTTGATTTGGGGTAAAGAGTTCTGTAGATGTCTATTAGGTCCACTTGGTGCAGAGCTGAGTTCAATTCCTGGATATCCTTGTTAACTTTATGTCTTGTTGATCTATCTAATGTTGACAGTAGGGTGTTAAAGTCTCCCATTATTATTGTGTGGGAGTCTAAGTCTCTTTGTCTCTAAGGACTTACTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAGGATAGGTAGCTCTTCTTGTTGAATTGATCCCTTTACCATTATGTGATGGCTTTCTTTGACTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAAGATTGTAACCCCTGCTTTTTTTTTGGTTTCCATTTGCTTGGTAGATCTTCCTCCATCCCTTTATTTTGAGCCCATGTGTGTCTCTGCATTTGAGATGGATGGGTTTCCTGAATACAGCACACTGATTGGTCTTGACTCTTTATCCAGTTTGTCAGTCTGTGTCTTTTAATTGGAGCATTTAGCCCATTTACATTTAAGGTTAATATTGTTATTTGTCAATTTGCTCCTGTCATGATGCTGTTAGCTGGTTATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGCCTCGATGGTCTTTACAATTGGCATGTTTTTGCAGTGGCTTGTACCGGTTTTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTGTAAGGCAGGTCTGGTGGTAAGAAAATCTCTCAGCATTTGTTTGTCTGTAAAGAATTTTATTTCTACTTCACTTATGAAGCTTAGTTTGGCTGGATATGCAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGACCCCCACTGTCTTCTGGCTTATAGAGTTTCTGCCAAGAGATCTGCTGTTAGTCTGCTGAGCTTCCTTTTGTGGGTAACCCGACCTTTGTCTCTGGCTTCCCTTAACATTTTTCCTTCATTTCCACTTTGGTGAATCTACAGTTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCATTCTCTGTATTTCCTGAATTTGAATGTTGGCCTGCCTCACTACGTTGGGGAAGTTCTCCTGGATAATATCCTGAAGAGTGTTTTCCAACTTGGTTCCATTCTCCCAGTCACTTTCAGGTACACCAAACAGATGGAGAATTAGTCTTTTCTCATA	20	PASS	ClusterIDs=HG4_PB_HySA_11716:HG4_PB_pbsv_7979:HG2_PB_HySA_14539:HG3_PB_pbsv_7733:HG2_PB_pbsv_7951:HG2_PB_assemblyticsfalcon_24515:HG2_PB_SVrefine2Falcon1plusDovetail_10930:HG3_Ill_SVrefine2DISCOVARDovetail_5991:HG4_PB_assemblyticsfalcon_23956:HG4_PB_SVrefine2Falcon1Dovetail_4871:HG3_PB_assemblyticsfalcon_24370:HG3_PB_SVrefine2Falcon1Dovetail_4808:HG2_PB_SVrefine2PB10Xhap12_5776:HG2_PB_PB10Xdip_27162:HG2_PB_PB10Xdip_27161:HG2_10X_SVrefine210Xhap12_5672:HG4_PB_SVrefine2PBcRDovetail_3930:HG4_Ill_SVrefine2DISCOVARDovetail_5781:HG2_PB_SVrefine2Falcon2Bionano_3914:HG3_PB_SVrefine2PBcRDovetail_3653:HG2_Ill_SVrefine2DISCOVARplusDovetail_11893:HG2_PB_HySA_14538;NumClusterSVs=22;ExactMatchIDs=HG2_PB_PB10Xdip_27161:HG2_PB_PB10Xdip_27162:HG2_PB_SVrefine2PB10Xhap12_5776;NumExactMatchSVs=3;ClusterMaxShiftDist=0.084686;ClusterMaxSizeDiff=0.0844843;ClusterMaxEditDist=0.201715;PBcalls=18;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=4754;DistBack=-5;DistForward=-4;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:19518328-19518322;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9996;PctRecOverlap=0.9992;SizeDiff=-2;StartDistance=1;EndDistance=5;GTMatch=0;TruScore=99;MatchId=4952.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:85:1/1:0:8:0:8:./.:0:0:0:0:1/1:0:47:1/1:0:993:.:4700:.
chr7	22853477	HG3_PB_assemblyticsfalcon_24398	TAAAAATGTAGCCC	AGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_11740:HG2_PB_PB10Xdip_27189:HG4_PB_pbsv_7997:HG4_PB_assemblyticsfalcon_23989:HG3_PB_assemblyticsfalcon_24398:HG2_PB_assemblyticsfalcon_24544:HG2_PB_pbsv_7967:HG3_PB_pbsv_7750:HG2_Ill_breakscan11_3809:HG3_PB_HySA_12104:HG2_PB_HySA_14569:HG2_10X_SVrefine210Xhap12_5683:HG4_PB_SVrefine2Falcon1Dovetail_4881:HG3_PB_SVrefine2Falcon1Dovetail_4815:HG3_PB_SVrefine2PBcRDovetail_3658:HG2_PB_SVrefine2PB10Xhap12_5782:HG2_PB_SVrefine2Falcon1plusDovetail_10937:HG2_PB_SVrefine2Falcon2Bionano_3921;NumClusterSVs=18;ExactMatchIDs=HG3_PB_assemblyticsfalcon_24398:HG4_PB_assemblyticsfalcon_23989;NumExactMatchSVs=2;ClusterMaxShiftDist=0.144796;ClusterMaxSizeDiff=0.144796;ClusterMaxEditDist=0.212443;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=303;DistBack=-1;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:22853491-22853476;PctSeqSimilarity=0.9724;PctSizeSimilarity=0.9072;PctRecOverlap=0.9433;SizeDiff=-31;StartDistance=0;EndDistance=13;GTMatch=0;TruScore=94;MatchId=4954.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:4:49:1/1:1:21:2:17:./.:0:0:0:0:0/1:13:16:0/1:9:38:.:.:.
chr7	22881303	HG2_Ill_SVrefine2DISCOVARplusDovetail_11912	T	TGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCACTTGAGGACAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACACCATCTCTACTAAAAATACAAAAATTAGCCAAGCGTGGTAGCACGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAAAGAATCGCGTGAACCCGGGAGGCAGAGGTTACAATGAGCCAAGATCACTCCGCTGCACTCCAGCCTGGGTGACTCCATCTAAAAGAAAGAGTAGGGGGGGCGGCGGGAGGGAGGGAGGAAGGAAGGAAGAAGAAGGAAGGGGGAAGGGAAGGAAGGGAGGGAGGAAGGAAGGAAAAAGAAGGAAAGAAAGAAAGAGAGAGAGACAGAGAAAGAAAGAAAAAAAAGAAAAGAAAGAAAAATGGAGGGAGTTTTTGTTTGTTTTTGAGGCAGAGTCTCGGCTCACTGCAACCTCCACCTCCTGGGTACAAGCGATTCTTGTGCCTTGCCAGTAGCTGGGATTACAGGTGCCTGCTACCAGGCCTGGCTAATTTTTGTATCTTTAGTAGAGACTGGGTTTCACCAAGTTGGCCAGGCTAGTTTTGAACTCCCGACCTCAAGTAATCTGCCCACCTAGGCCTCCCAAAGAGCTGGGATTACAGGCCTGAGCCACCGCACTGGCCAGAGGGAGCTTTTTTAAAAATAGAGTGCGCTGGGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4816:HG3_PB_pbsv_7751:HG3_PB_HySA_12105:HG2_PB_pbsv_7968:HG4_PB_pbsv_7998:HG4_Ill_MetaSV_4834:HG4_Ill_GATKHCSBGrefine_5574:HG3_Ill_MetaSV_4801:HG3_Ill_GATKHCSBGrefine_5414:HG2_Ill_MetaSV_4630:HG2_Ill_GATKHCSBGrefine_5486:HG4_PB_HySA_11741:HG2_PB_HySA_14571:HG2_PB_PB10Xdip_27190:HG2_PB_SVrefine2Falcon1plusDovetail_10938:HG4_Ill_SVrefine2DISCOVARDovetail_5796:HG3_PB_SVrefine2PBcRDovetail_3659:HG3_Ill_SVrefine2DISCOVARDovetail_6009:HG2_PB_SVrefine2PB10Xhap12_5783:HG2_Ill_SVrefine2DISCOVARplusDovetail_11912:HG2_10X_SVrefine210Xhap12_5684:HG2_PB_SVrefine2Falcon2Bionano_3922:HG4_PB_SVrefine2PBcRDovetail_3940:HG4_PB_SVrefine2Falcon1Dovetail_4882;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5684:HG2_Ill_SVrefine2DISCOVARplusDovetail_11912:HG2_PB_SVrefine2PB10Xhap12_5783:HG3_Ill_SVrefine2DISCOVARDovetail_6009:HG3_PB_SVrefine2PBcRDovetail_3659:HG4_Ill_SVrefine2DISCOVARDovetail_5796;NumExactMatchSVs=6;ClusterMaxShiftDist=0.04;ClusterMaxSizeDiff=0.0386207;ClusterMaxEditDist=0.24914;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=718;DistBack=13450;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=260;REFWIDENED=7:22881304-22881563;PctSeqSimilarity=0.9993;PctSizeSimilarity=1;PctRecOverlap=0.9833;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=99;MatchId=4955.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:1:29:0:22:./.:0:0:0:0:1/1:0:17:1/1:6:113:.:.:.
chr7	23543152	HG4_Ill_SVrefine2DISCOVARDovetail_5800	T	TGCTCTCTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGGTGGGAGTACAGGCGCATGCCACCATCCGTGGCTAATTTTTGTATTTTCAGTAGAGACTGGGTTTCACCATGTTGGCCAGGTGAGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCCCGCAAAGCGCTAGGATTACAGGCATAAACGACCACGCCCAGCCCAAAAGGTAAGCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTGCCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAAGCTCTGCCTCTCTGGTTGATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCAGCACCACGCCTGGCTAATTTTTTGTATTTTTAGTACAGAGGGGGTTTCACCTTGTTAGCCAGGATGGTCTTGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAATTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCCAAAAAGCTTTTAAATAAAGATGTCGGGCTGGGCATGGCTCCTACCTGTAATCTCAGCACTGTGGGAGGCCCGAGTCTTTACACCTGTCTCTCTTTAAGATGCAGCTATCCACACCTATTGCTTCTAACAGCAGTTTCCATATATATATATACATGTGTATATATATATATATGTATATGTATATATATATGTATATGTATATACATATATATGTATATGTATATATACATATATATGTATATGTATATATACATATATATGTATATGTGTATATATATATATATGTATATATATATATATATAAAACTTACCTCTTACTTAAAAGCCACACCCCCCTAACTCCATTTGTCTCCTTCCCTGCTTTTTCATCTTCCCACATATGTAAAATCTTCAATAATATTTACTGGATTTTTTTTTTTTTTTTGAGACAGAGTTTCGCTCTTGTTGCCCAGGCTAGAGGGGAGTGGCTCGATCTGTGTTCACCGCAACCTCCGCCTCCCGGGTTCAAGCAACTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGAACTTGCCACCATGCCTGGCTAATTTTTGAATTTTTAGTAGAGACGAGGTTTCTCCATGTTGGTCAGACTGGTCTTGAACTCCCGACCTCAGGTGATCCACCCGCCCTGGCCTCCCAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCCTCTCTTAATAAATACTGTCTTCCAGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGACTGAGGCGGGCGGATCACCTGAGGTCGGGAGTTCAAGACCAGTCTGACCAACATGGAGGAACCTCGTCTCTACCAAAAATATAAAATTAGCCAGGGTGGTGGCGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGATCCCAGGACATGGAGGTTGTGGTGAGCCGAGATCGCACCATTGCACTCCAGCCTGGGCAACCAGAGCGAAACTACGTCTCAAAAAAAACAAACAGGCCGCGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTCGGGAGGCCGAGGTGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACTCTGCCTCTTACTAAAAATACAAAAAAAAAAAAAAAAAAAAATTAGCTGGGCGTGGTGGTGGGCACCTGTAGTCCCAGCTACCAGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGGCGAGATTGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAACAAAACAAAACAAAACAGAAAAAACCTGTCTTCCAGATTGAGGCTAATGTTTTCAGTGTTGATATACTGCTTAAGTCTTTTAAAATACTCATATAGTCAACAATGTTCTATTTAGAACTATAGGTTCTTTTTATTATTAAAGCCAAACCAAACCTTTATTATTATTAGAGACAGGGTTGTATGTTGCCCAGCTGGAGTGCAGTGGTTATTCACAGGCACAATCATAATAGCACACTGCAGCCTTGAATTCCTGGCCTCAAGCAATCTTCCTGCCTCAGCGTTCCAAGTAGCTGTGACTATAGGTGCACTCGACTGTGCTCGGTTCCCTAGTTGCAAAATTTAATTATTTAAAATAATTTTTAAATAATAAATGTATTATTTAAAAAGGACAAGTCTTTCAAAAAGTAAGCTTTTAAATAAAGATGTCTGGCTGGGCATGGTGGCTCATGCCCGTAATCCCAGCACTGTGGGAGGCCGAGGTGGGAGGACTACTTCAGCCTAGGAAGCAGAGGTTGCAGTGAGCCAAGAACACACCACTGAACTCCAGCCTGGGTGACAGAGACCCTGTTTCAAACAGAGCAAAAGATGTCTGAGGCTTCAATCCCCTAACACCTTTTCTTTCTTTTGAGACCACTTTGGCCAGGCTGGTCTCCAACTCCTGACCTCAAGTGATCCACCTGCTCAACCTCCGAAACTGCTGGAATTACAGGCATAAGCCACCACGTCTGGCCCTAATCCCCCTTTTTTTTTTTTTTTTTGGAGATGGAGTCTCACTCTGTTACCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAAACTCCACCTCCCGGGTTCAAGCAATTCTTCTGCCTCTGCCTCCTGAGTAGTTGTGATTACAGGTGCGTGCCACCACACCCAGCTACTTTTTGTATTTTTAGTAGAGATGGAGTTTCACCACATTGGCCAGTCTGAGCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCAAGCCTGGCCCCTAACACCATTTTTTTTTGTAGAGTCTCGCTCTGTCGCCCAGGCTGGAATGCAGTGGGGTGATCTCG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4884:HG4_PB_pbsv_8001:HG2_PB_PB10Xdip_27215:HG2_PB_PB10Xdip_27214:HG4_PB_HySA_11744:HG2_PB_HySA_14576:HG3_PB_HySA_12110:HG3_PB_HySA_12109:HG2_PB_SVrefine2Falcon2Bionano_3924:HG2_PB_assemblyticsfalcon_24550:HG3_PB_assemblyticsfalcon_24403:HG4_PB_assemblyticsfalcon_23994:HG2_Ill_SVrefine2DISCOVARplusDovetail_11915:HG4_PB_SVrefine2PBcRDovetail_3942:HG4_Ill_SVrefine2DISCOVARDovetail_5800:HG2_PB_SVrefine2PB10Xhap12_5785:HG3_Ill_SVrefine2DISCOVARDovetail_6013:HG2_10X_SVrefine210Xhap12_5687:HG2_PB_SVrefine2Falcon1plusDovetail_10941:HG3_PB_SVrefine2Falcon1Dovetail_4818:HG3_PB_SVrefine2PBcRDovetail_3660;NumClusterSVs=21;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_5800:HG4_PB_SVrefine2PBcRDovetail_3942;NumExactMatchSVs=2;ClusterMaxShiftDist=0.19142;ClusterMaxSizeDiff=0.19142;ClusterMaxEditDist=0.225944;PBcalls=17;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=2966;DistBack=4604;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=209;REFWIDENED=7:23543153-23543361;PctSeqSimilarity=0.9982;PctSizeSimilarity=1;PctRecOverlap=0.9791;SizeDiff=0;StartDistance=-62;EndDistance=-62;GTMatch=0;TruScore=99;MatchId=4956.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:90:1/1:2:40:2:32:./.:0:0:0:0:1/1:0:21:1/1:7:496:.:.:.
chr7	23665669	HG2_10X_SVrefine210Xhap12_5688	T	TAAAATTTTATGTAGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_7972:HG3_PB_assemblyticsfalcon_24405:HG3_PB_HySA_12111:HG3_PB_pbsv_7754:HG2_PB_HySA_14578:HG2_Ill_breakscan11_3810:HG2_PB_assemblyticsfalcon_24551:HG4_PB_assemblyticsfalcon_23996:HG3_Ill_MetaSV_4803:HG2_Ill_GATKHCSBGrefine_5488:HG2_10X_SVrefine210Xhap12_5688:HG2_PB_SVrefine2Falcon1plusDovetail_10942:HG4_PB_SVrefine2Falcon1Dovetail_4885:HG3_PB_SVrefine2Falcon1Dovetail_4819;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5688:HG2_Ill_GATKHCSBGrefine_5488;NumExactMatchSVs=2;ClusterMaxShiftDist=0.175159;ClusterMaxSizeDiff=0.175159;ClusterMaxEditDist=0.233169;PBcalls=10;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=313;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=7:23665670-23665685;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4957.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:./.:19:7:4:17:./.:0:0:0:0:0/1:20:9:0/1:6:29:.:.:.
chr7	23891019	HG4_Ill_GATKHCSBGrefine_5583	T	TCCTCATGATTATGAGGGAGTTGTCACCAGATCTGGTTGTTTAAAAGTGTGTAGCACCTCTC	20	PASS	ClusterIDs=HG4_PB_pbsv_8005:HG3_PB_assemblyticsfalcon_24410:HG2_PB_pbsv_7977:HG2_PB_assemblyticsfalcon_24557:HG4_PB_HySA_11748:HG3_PB_pbsv_7759:HG4_Ill_svaba_10292:HG4_Ill_manta_1961:HG4_Ill_SVrefine2DISCOVARDovetail_5803:HG4_Ill_Krunchall_11581:HG4_Ill_GATKHC_13178:HG4_Ill_GATKHCSBGrefine_5583:HG4_Ill_250bpfermikitraw_10974:HG3_PB_SVrefine2PBcRDovetail_3662:HG3_PB_SVrefine2Falcon1Dovetail_4820:HG3_Ill_svaba_10254:HG3_Ill_manta_1872:HG3_Ill_SVrefine2DISCOVARDovetail_6019:HG3_Ill_Krunchall_10964:HG3_Ill_GATKHC_13060:HG3_Ill_GATKHCSBGrefine_5418:HG3_Ill_250bpfermikitraw_10653:HG3_Ill_150bpfermikitraw_10370:HG2_PB_SVrefine2PB10Xhap12_5789:HG2_PB_SVrefine2Falcon2Bionano_3927:HG2_PB_SVrefine2Falcon1plusDovetail_10944:HG2_Ill_svaba_10161:HG2_Ill_manta_2287:HG2_Ill_SpiralSDKrefine_15642:HG2_Ill_SVrefine2DISCOVARplusDovetail_11919:HG2_Ill_Krunchall_11246:HG2_Ill_GATKHC_13099:HG2_Ill_GATKHCSBGrefine_5491:HG2_Ill_250bpfermikitraw_10976:HG2_Ill_150bpfermikitraw_10324:HG2_10X_SVrefine210Xhap12_5692:HG2_PB_HySA_14582:HG2_PB_PB10Xdip_27220:HG2_PB_PB10Xdip_27219:HG2_Ill_breakscan11_3811:HG3_PB_HySA_12115;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5692:HG2_Ill_150bpfermikitraw_10324:HG2_Ill_250bpfermikitraw_10976:HG2_Ill_GATKHCSBGrefine_5491:HG2_Ill_GATKHC_13099:HG2_Ill_Krunchall_11246:HG2_Ill_SVrefine2DISCOVARplusDovetail_11919:HG2_Ill_SpiralSDKrefine_15642:HG2_Ill_manta_2287:HG2_Ill_svaba_10161:HG2_PB_SVrefine2Falcon1plusDovetail_10944:HG2_PB_SVrefine2Falcon2Bionano_3927:HG2_PB_SVrefine2PB10Xhap12_5789:HG3_Ill_150bpfermikitraw_10370:HG3_Ill_250bpfermikitraw_10653:HG3_Ill_GATKHCSBGrefine_5418:HG3_Ill_GATKHC_13060:HG3_Ill_Krunchall_10964:HG3_Ill_SVrefine2DISCOVARDovetail_6019:HG3_Ill_manta_1872:HG3_Ill_svaba_10254:HG3_PB_SVrefine2Falcon1Dovetail_4820:HG3_PB_SVrefine2PBcRDovetail_3662:HG4_Ill_250bpfermikitraw_10974:HG4_Ill_GATKHCSBGrefine_5583:HG4_Ill_GATKHC_13178:HG4_Ill_Krunchall_11581:HG4_Ill_SVrefine2DISCOVARDovetail_5803:HG4_Ill_manta_1961:HG4_Ill_svaba_10292:HG4_PB_HySA_11748;NumExactMatchSVs=31;ClusterMaxShiftDist=0.113821;ClusterMaxSizeDiff=0.097561;ClusterMaxEditDist=0.25;PBcalls=15;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=61;DistBack=10043;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=7:23891020-23891022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4958.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:12:0:10:./.:0:0:0:0:1/1:0:54:./.:.:.:.:.:.
chr7	24068314	HG2_Ill_SVrefine2DISCOVARplusDovetail_11921	G	GGTAGTGAGAATTTTTTTAACTGTGTATACGTTTTAGAAGTTGAGTCAAGAAGATTTTCTTGCATGGATATGTGAAAGAAAGAGAAATCTCAGAAGTCAAAGATTTTGGCCTGAGCAGTAAAAAGGATAGGGTTACTATGAACTGAAATGGGAAAGACTGAGGAGGAGCAGGATTTGGTGGTGACTTCAGTAGTGGGTTTTAGATTT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10325:HG4_PB_pbsv_8008:HG2_PB_pbsv_7980:HG2_PB_HySA_14583:HG2_PB_PB10Xdip_27222:HG2_PB_PB10Xdip_27221:HG3_PB_HySA_12116:HG3_PB_pbsv_7762:HG4_PB_HySA_11749:HG4_PB_SVrefine2Falcon1Dovetail_4890:HG3_PB_SVrefine2Falcon1Dovetail_4822:HG2_10X_SVrefine210Xhap12_5695:HG4_Ill_MetaSV_4837:HG4_PB_SVrefine2PBcRDovetail_3944:HG4_Ill_SVrefine2DISCOVARDovetail_5805:HG4_Ill_250bpfermikitraw_10977:HG3_PB_SVrefine2PBcRDovetail_3665:HG3_Ill_SVrefine2DISCOVARDovetail_6020:HG3_Ill_250bpfermikitraw_10654:HG2_PB_SVrefine2PB10Xhap12_5791:HG2_PB_SVrefine2Falcon2Bionano_3929:HG2_PB_SVrefine2Falcon1plusDovetail_10946:HG2_Ill_SVrefine2DISCOVARplusDovetail_11921:HG2_Ill_250bpfermikitraw_10978;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10325:HG4_PB_SVrefine2PBcRDovetail_3944:HG4_Ill_SVrefine2DISCOVARDovetail_5805:HG4_Ill_250bpfermikitraw_10977:HG3_PB_SVrefine2PBcRDovetail_3665:HG3_Ill_SVrefine2DISCOVARDovetail_6020:HG3_Ill_250bpfermikitraw_10654:HG2_PB_SVrefine2PB10Xhap12_5791:HG2_PB_SVrefine2Falcon2Bionano_3929:HG2_PB_SVrefine2Falcon1plusDovetail_10946:HG2_Ill_SVrefine2DISCOVARplusDovetail_11921:HG2_Ill_250bpfermikitraw_10978;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0704225;ClusterMaxSizeDiff=0.0657277;ClusterMaxEditDist=0.191142;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=206;DistBack=-206;DistForward=208;DistMin=-206;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=207;REFWIDENED=7:24068315-24068521;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4959.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:74:1/1:0:18:1:19:./.:0:0:0:0:1/1:0:41:./.:.:.:.:.:.
chr7	25417767	HG2_Ill_GATKHC_13115	T	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5700:HG2_PB_pbsv_7988:HG4_PB_pbsv_8014:HG4_Ill_svaba_10305:HG4_Ill_Krunchall_11599:HG4_Ill_GATKHC_13191:HG4_Ill_GATKHCSBGrefine_5590:HG2_Ill_GATKHC_13115:HG2_Ill_GATKHCSBGrefine_5500:HG4_PB_HySA_11760:HG2_PB_HySA_14601:HG2_PB_SVrefine2PB10Xhap12_5798:HG4_PB_SVrefine2PBcRDovetail_3949:HG4_Ill_SVrefine2DISCOVARDovetail_5809:HG2_PB_SVrefine2Falcon1plusDovetail_10951;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5500:HG2_Ill_GATKHC_13115:HG4_Ill_GATKHCSBGrefine_5590:HG4_Ill_GATKHC_13191:HG4_Ill_Krunchall_11599:HG4_Ill_svaba_10305;NumExactMatchSVs=6;ClusterMaxShiftDist=0.144144;ClusterMaxSizeDiff=0.126126;ClusterMaxEditDist=0.198198;PBcalls=7;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=56;DistBack=8;DistForward=14;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=68;REFWIDENED=7:25417753-25417820;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4960.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:46:0|1:32:2:6:40:./.:0:0:0:0:0/1:22:10:./.:.:.:.:.:.
chr7	26208046	HG2_Ill_MetaSV_4636	G	GTGCCCAGACATTCTTGTCATTCTTATGCCTTTGTATCCTCATAGCTTAGCTCCCATTTATGAGTGAGAACATACCAAACATGTTTGGTTTTCTCTTCCTGAGTTACTTCACTTAGAATAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5704:HG2_PB_pbsv_7994:HG3_PB_pbsv_7778:HG2_PB_HySA_14605:HG4_Ill_SVrefine2DISCOVARDovetail_5814:HG4_Ill_MetaSV_4842:HG4_Ill_GATKHCSBGrefine_5592:HG3_PB_SVrefine2PBcRDovetail_3672:HG3_Ill_manta_1876:HG3_Ill_Spiral_8598:HG3_Ill_MetaSV_4810:HG3_Ill_GATKHCSBGrefine_5427:HG2_PB_SVrefine2Falcon2Bionano_3938:HG2_Ill_manta_2292:HG2_Ill_SpiralSDKrefine_15659:HG2_Ill_MetaSV_4636:HG2_Ill_GATKHCSBGrefine_5502;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5704:HG4_Ill_SVrefine2DISCOVARDovetail_5814:HG4_Ill_MetaSV_4842:HG4_Ill_GATKHCSBGrefine_5592:HG3_PB_SVrefine2PBcRDovetail_3672:HG3_Ill_manta_1876:HG3_Ill_Spiral_8598:HG3_Ill_MetaSV_4810:HG3_Ill_GATKHCSBGrefine_5427:HG2_PB_SVrefine2Falcon2Bionano_3938:HG2_Ill_manta_2292:HG2_Ill_SpiralSDKrefine_15659:HG2_Ill_MetaSV_4636:HG2_Ill_GATKHCSBGrefine_5502;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0489796;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.122449;PBcalls=5;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=120;DistBack=20003;DistForward=8010;DistMin=8010;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:26208047-26208047;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4962.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:21:0|1:26:3:2:24:./.:0:0:0:0:0/1:26:16:./.:.:.:.:.:.
chr7	26900470	HG2_PB_SVrefine2Falcon2Bionano_3940	C	CAATGTGTGAAGATAATCAGTATGTTTAGGGGACATTGATTATCAATGTGAAGATAATCAATGTCCCCTAAACATACTGATTATCTTCACACAT	20	PASS	ClusterIDs=HG4_PB_pbsv_8022:HG4_PB_SVrefine2PBcRDovetail_3956:HG3_PB_pbsv_7780:HG2_PB_pbsv_7996:HG4_PB_SVrefine2Falcon1Dovetail_4900:HG4_PB_assemblyticsfalcon_24025:HG3_PB_assemblyticsfalcon_24434:HG2_PB_assemblyticsfalcon_24586:HG4_Ill_svaba_10310:HG4_Ill_manta_1968:HG4_Ill_SVrefine2DISCOVARDovetail_5816:HG4_Ill_Krunchall_11606:HG4_Ill_GATKHCSBGrefine_5596:HG4_Ill_250bpfermikitraw_10999:HG4_Ill_150bpfermikitraw_10557:HG3_PB_SVrefine2PBcRDovetail_3674:HG3_PB_SVrefine2Falcon1Dovetail_4828:HG3_Ill_svaba_10275:HG3_Ill_manta_1878:HG3_Ill_Spiral_8607:HG3_Ill_SVrefine2DISCOVARDovetail_6029:HG3_Ill_Krunchall_10989:HG3_Ill_GATKHC_13090:HG3_Ill_GATKHCSBGrefine_5428:HG3_Ill_150bpfermikitraw_10393:HG2_PB_SVrefine2PBcRplusDovetail_10155:HG2_PB_SVrefine2PB10Xhap12_5805:HG2_PB_SVrefine2Falcon2Bionano_3940:HG2_PB_SVrefine2Falcon1plusDovetail_10957:HG2_Ill_svaba_10178:HG2_Ill_manta_2294:HG2_Ill_SVrefine2DISCOVARplusDovetail_11931:HG2_Ill_Krunchall_11273:HG2_Ill_GATKHCSBGrefine_5503:HG2_Ill_250bpfermikitraw_11002:HG2_Ill_150bpfermikitraw_10347:HG2_10X_SVrefine210Xhap12_5706:HG2_PB_PB10Xdip_27375:HG2_PB_PB10Xdip_27374:HG2_Ill_breakscan11_3812;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5706:HG2_Ill_150bpfermikitraw_10347:HG2_Ill_250bpfermikitraw_11002:HG2_Ill_GATKHCSBGrefine_5503:HG2_Ill_Krunchall_11273:HG2_Ill_SVrefine2DISCOVARplusDovetail_11931:HG2_Ill_manta_2294:HG2_Ill_svaba_10178:HG2_PB_SVrefine2Falcon1plusDovetail_10957:HG2_PB_SVrefine2Falcon2Bionano_3940:HG2_PB_SVrefine2PB10Xhap12_5805:HG2_PB_SVrefine2PBcRplusDovetail_10155:HG3_Ill_150bpfermikitraw_10393:HG3_Ill_GATKHCSBGrefine_5428:HG3_Ill_GATKHC_13090:HG3_Ill_Krunchall_10989:HG3_Ill_SVrefine2DISCOVARDovetail_6029:HG3_Ill_Spiral_8607:HG3_Ill_manta_1878:HG3_Ill_svaba_10275:HG3_PB_SVrefine2Falcon1Dovetail_4828:HG3_PB_SVrefine2PBcRDovetail_3674:HG4_Ill_150bpfermikitraw_10557:HG4_Ill_250bpfermikitraw_10999:HG4_Ill_GATKHCSBGrefine_5596:HG4_Ill_Krunchall_11606:HG4_Ill_SVrefine2DISCOVARDovetail_5816:HG4_Ill_manta_1968:HG4_Ill_svaba_10310:HG4_PB_SVrefine2Falcon1Dovetail_4900:HG4_PB_SVrefine2PBcRDovetail_3956;NumExactMatchSVs=31;ClusterMaxShiftDist=0.224599;ClusterMaxSizeDiff=0.224599;ClusterMaxEditDist=0.28877;PBcalls=16;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=93;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=7:26900471-26900478;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4964.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:39:1/1:0:20:1:21:./.:0:0:0:0:1/1:0:54:./.:.:.:.:.:.
chr7	27307050	HG4_Ill_GATKHCSBGrefine_5597	A	ACTGTCGCTTATAGTAAGTCTTAAGTCGGATAATGTGTTTCCTCCAACTTTTTTTTCATAACTTATTTGGTTCTTCTAGTTCCTTTCCCTTTCAATTTAAATTCTAGAATCAGCTTGTCTATTATTTTAAAAAGTATTTCTGGCATTTTGATTGGAAATGCATTAAATCTTATTTTTTATTTATTTATTTTATTAATATTATTATTATTTTTGAGACAGTCTGTCTTTGTTGCCCAGGCTGGAGTGCAGTGGTATGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAACCTCCCAAGTATCTGGGATTACAGGCACATG	20	PASS	ClusterIDs=HG4_PB_pbsv_8023:HG3_PB_pbsv_7782:HG2_PB_pbsv_7999:HG4_PB_HySA_11774:HG4_PB_assemblyticsfalcon_24030:HG3_PB_assemblyticsfalcon_24438:HG2_PB_assemblyticsfalcon_24588:HG2_PB_PB10Xdip_27377:HG2_PB_PB10Xdip_27376:HG2_Ill_breakscan11_3813:HG4_PB_SVrefine2PBcRDovetail_3957:HG4_PB_SVrefine2Falcon1Dovetail_4901:HG4_Ill_manta_1969:HG4_Ill_SVrefine2DISCOVARDovetail_5819:HG4_Ill_GATKHCSBGrefine_5597:HG3_PB_SVrefine2PBcRDovetail_3675:HG3_PB_SVrefine2Falcon1Dovetail_4829:HG3_Ill_manta_1879:HG3_Ill_SVrefine2DISCOVARDovetail_6031:HG3_Ill_MetaSV_4811:HG3_Ill_GATKHCSBGrefine_5430:HG2_PB_SVrefine2PBcRplusDovetail_10156:HG2_PB_SVrefine2PB10Xhap12_5807:HG2_PB_SVrefine2Falcon2Bionano_3941:HG2_PB_SVrefine2Falcon1plusDovetail_10958:HG2_Ill_manta_2295:HG2_Ill_SVrefine2DISCOVARplusDovetail_11932:HG2_Ill_MetaSV_4637:HG2_Ill_GATKHCSBGrefine_5505:HG2_10X_SVrefine210Xhap12_5707:HG4_Ill_MetaSV_4843;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5707:HG2_Ill_GATKHCSBGrefine_5505:HG2_Ill_MetaSV_4637:HG2_Ill_SVrefine2DISCOVARplusDovetail_11932:HG2_Ill_manta_2295:HG2_PB_SVrefine2Falcon1plusDovetail_10958:HG2_PB_SVrefine2Falcon2Bionano_3941:HG2_PB_SVrefine2PB10Xhap12_5807:HG2_PB_SVrefine2PBcRplusDovetail_10156:HG3_Ill_GATKHCSBGrefine_5430:HG3_Ill_MetaSV_4811:HG3_Ill_SVrefine2DISCOVARDovetail_6031:HG3_Ill_manta_1879:HG3_PB_SVrefine2Falcon1Dovetail_4829:HG3_PB_SVrefine2PBcRDovetail_3675:HG4_Ill_GATKHCSBGrefine_5597:HG4_Ill_SVrefine2DISCOVARDovetail_5819:HG4_Ill_manta_1969:HG4_PB_SVrefine2Falcon1Dovetail_4901:HG4_PB_SVrefine2PBcRDovetail_3957;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.045911;ClusterMaxEditDist=0.141044;PBcalls=17;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=341;DistBack=0;DistForward=2;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=7:27307051-27307052;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4965.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:./.:0:3:0:13:./.:0:0:0:0:1/1:0:18:./.:3:37:.:.:.
chr7	27804641	HG2_Ill_SVrefine2DISCOVARplusDovetail_11937	T	TTTTTTTTTTTTGAGGCGGAGTCTCACTCTGTCGCTCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTGACTGCAACCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGACCAGCTGGGACCACAGGCACCCACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCCAGATGGTCTCGATCTCCTGACCTCGTGATCTGCCTGCTTCGGCCTACCAAAGTGTTGGGATTACAGGCGTGAGCCACTGCGCCCAGCCTCCCCTCTCTGTTTCTAAGGAGAAAAGCCAGCTGTTTTTTAAAGAGTGAAATCAGGTGAAGTAGGTATAATAACTGAGGCTGAAAATTTCAAGACATGAAAGAACAGCAGGTGTAGTGATTATAGCTTTTGGGGTAGATATTAATAAGGTAAATATATTCATCTTTGTTTATTCATTTCACAATTATTGAATGTTTCCTTTTTACAAGTCATTCTGGGGAATTCTGAATTTTTTTAATATGTAAGTGCACAAATATGTACATATATATGTGCCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTATCTATGGCGTTTTTGAGGTCTGATGTAGTTGTAAGGCATGTACATAGTAACTAGTAATGTTAGGTTTGCCGTGGAGGTATGTAGTTTTTACATCTGATCTTAGCCAAAAAGGGTGAGATGCAAAAGGAGATATTTATTTTTTAATGTAAAAAGTACTATGTGAGCTTTGGTGAGGAGGCAAAGATTAATTTTAAGTTATAATAATCCAGCAGAATTTAAAATGGGATAACAATTAAATTGAAGAAAGAAGGGGGCAAATATTGAACACATTATTCTAGATACTATAAATATATTATCTATTTGTTAATATTTTGGATCTCTGAGACAGATGGCCCCTTTTTTCTTTTTTTTTAAATTTTTTTTGAGATGTAGTTTTGCTCTTGTTGCCCAGGTTAGAGTGCAGTGGCACGATCTCGGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGTCTCCCGAATAGCTGAAATTACAGGCATGCGCCACAGCACCTGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTAGTCTCAAACTCCCAACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCCCCTGGCCTTTTTTTTTTTTTTTTTTTTTTTAAAAAACAGATTAAGAGCCTGCGGCGGCCGGGCGCAGTGGCTCATGCCTGTAATCCCAGAACTTTGGGAGGCCGAGGCGGGGAGATCACGAGGTCAGGAGATTGATACCATCCGGGCTAACACGGTAAAACCCCGTCTCTACTAAAAATACAAAAAATTAACCAGGTGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTCAGGCGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGACTGCGCCACTGCACTCCAGCCAGGACAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGAGCCTGCGGCTCAGGGAGGTTAAGTAAATAATAGTGGTAGAGCTGGATTTCTGAATAGATCTGTGTGGTTCGAAAGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11937:HG2_PB_pbsv_8002:HG4_PB_HySA_11782:HG3_PB_HySA_12151:HG2_PB_PB10Xdip_27378:HG4_PB_pbsv_8026:HG3_PB_assemblyticsfalcon_24441:HG3_PB_SVrefine2Falcon1Dovetail_4832:HG4_PB_assemblyticsfalcon_24036:HG2_PB_assemblyticsfalcon_24594:HG2_PB_SVrefine2Falcon2Bionano_3944:HG2_10X_SVrefine210Xhap12_5710:HG3_PB_SVrefine2PBcRDovetail_3678:HG4_PB_SVrefine2Falcon1Dovetail_4904:HG2_PB_SVrefine2Falcon1plusDovetail_10961:HG2_PB_SVrefine2PBcRplusDovetail_10159:HG2_PB_SVrefine2PB10Xhap12_5810:HG4_PB_SVrefine2PBcRDovetail_3960:HG4_Ill_SVrefine2DISCOVARDovetail_5823:HG3_Ill_SVrefine2DISCOVARDovetail_6035;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11937:HG4_Ill_SVrefine2DISCOVARDovetail_5823:HG3_Ill_SVrefine2DISCOVARDovetail_6035;NumExactMatchSVs=3;ClusterMaxShiftDist=0.106548;ClusterMaxSizeDiff=0.106548;ClusterMaxEditDist=0.215004;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=1672;DistBack=20917;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=7:27804642-27804694;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9994;PctRecOverlap=0.9719;SizeDiff=-1;StartDistance=-47;EndDistance=-47;GTMatch=0;TruScore=98;MatchId=4966.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:88:1/1:0:11:0:22:./.:0:0:0:0:1/1:0:9:./.:18:274:.:1487:.
chr7	28150067	HG2_PB_SVrefine2Falcon2Bionano_3945	A	AAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4833:HG2_PB_SVrefine2Falcon2Bionano_3945:HG3_PB_SVrefine2PBcRDovetail_3679:HG3_PB_pbsv_7787:HG2_PB_pbsv_8003;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3945;NumExactMatchSVs=1;ClusterMaxShiftDist=0.180952;ClusterMaxSizeDiff=0.180952;ClusterMaxEditDist=0.214286;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=224;DistBack=-212;DistForward=-1;DistMin=-212;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=216;REFWIDENED=7:28150068-28150283;PctSeqSimilarity=0.9687;PctSizeSimilarity=0.9655;PctRecOverlap=0.5966;SizeDiff=-8;StartDistance=-90;EndDistance=-90;GTMatch=0;TruScore=84;MatchId=4967.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:20:./.:6:18:17:1:./.:0:0:0:0:0/1:10:6:./.:.:.:.:.:.
chr7	28877844	HG2_PB_SVrefine2Falcon2Bionano_3946	C	CCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCTCTCCCTCTCCCCTCTTTCCACGGTCT	20	PASS	ClusterIDs=HG4_PB_HySA_11790:HG4_PB_pbsv_8030:HG2_PB_pbsv_8006:HG3_PB_pbsv_7788:HG4_PB_assemblyticsfalcon_24043:HG2_PB_PB10Xdip_27383:HG2_PB_PB10Xdip_27382:HG3_PB_HySA_12157:HG3_PB_SVrefine2Falcon1Dovetail_4837:HG4_PB_SVrefine2PBcRDovetail_3963:HG4_Ill_svaba_10325:HG4_Ill_scalpel_7606:HG4_Ill_GATKHC_13217:HG4_Ill_GATKHCSBGrefine_5605:HG3_Ill_svaba_10288:HG3_Ill_GATKHC_13107:HG3_Ill_250bpfermikitraw_10686:HG2_PB_SVrefine2Falcon2Bionano_3946:HG2_Ill_svaba_10191:HG2_Ill_GATKHC_13143:HG2_Ill_GATKHCSBGrefine_5512:HG2_10X_SVrefine210Xhap12_5712;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5712:HG2_Ill_GATKHCSBGrefine_5512:HG2_Ill_GATKHC_13143:HG2_Ill_svaba_10191:HG2_PB_SVrefine2Falcon2Bionano_3946:HG3_Ill_250bpfermikitraw_10686:HG3_Ill_GATKHC_13107:HG3_Ill_svaba_10288:HG4_Ill_GATKHCSBGrefine_5605:HG4_Ill_GATKHC_13217:HG4_Ill_scalpel_7606:HG4_Ill_svaba_10325;NumExactMatchSVs=12;ClusterMaxShiftDist=0.198198;ClusterMaxSizeDiff=0.19469;ClusterMaxEditDist=0.27027;PBcalls=11;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=58;DistBack=36148;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=7:28877845-28877849;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4969.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:4:27:0:29:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr7	29185157	HG2_PB_SVrefine2Falcon2Bionano_3947	T	CGGCCAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAC	10	PASS	ClusterIDs=HG2_PB_pbsv_8008:HG2_PB_HySA_14627:HG3_PB_pbsv_7790:HG3_PB_HySA_12163:HG3_PB_SVrefine2Falcon1Dovetail_4838:HG2_PB_SVrefine2Falcon2Bionano_3947:HG3_PB_SVrefine2PBcRDovetail_3680:HG2_PB_SVrefine2PBcRplusDovetail_10161:HG2_PB_SVrefine2PB10Xhap12_5815:HG2_PB_SVrefine2Falcon1plusDovetail_10963;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3947;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0729483;ClusterMaxEditDist=0.217327;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=333;DistBack=0;DistForward=10;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:29185158-29185156;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.994;PctRecOverlap=0.991;SizeDiff=-2;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=4970.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:21:28:0|1:16:2:3:31:./.:0:0:0:0:0/1:38:8:./.:5:44:.:.:.
chr7	29831192	HG2_PB_SVrefine2Falcon1plusDovetail_10965	A	AGGACTCTGCATATTTTTTTTTTTTTTTTCAATCTTATTTTGGGGTTGAAAGGACCCACCATTCCCTTTTTTTTTATTATTTTTTTTATTTTTAATTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAACAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTTTATCCACACAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCCGGCCGGGCGGGGGGCTGACCCCCCCACCTCCTCCCGGACAGGGCGGCTGGCCGACCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCAGCTGGCGGGGCGGGGGCTGATCCCCCCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACGCCCCCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGAGACGCTCCTCACTTTCCAGACGGGGTGGCTGCCAGGCAGAGGGGCTCCTCACTTCCCAGACGAGGTGGCTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCTAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACAGGGTTGCGGCCAGCAGGGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTCCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGCTCCTCATATCCCAGACGATGGGGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGGGCCAAGGCAGGCGGCTGGGAGGTGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCGTGGAAGGAGACCGTGGAGAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGGGAGAGGGAGAGGGAGAGGAGAGAGGGAGGGAGAGGGAGAGGAGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10965:HG3_PB_assemblyticsfalcon_24460:HG2_PB_assemblyticsfalcon_24614:HG2_PB_pbsv_8010:HG3_PB_HySA_12168:HG4_PB_assemblyticsfalcon_24052:HG2_PB_PB10Xdip_27393:HG2_PB_HySA_14639:HG3_PB_SVrefine2Falcon1Dovetail_4840:HG2_PB_SVrefine2PB10Xhap12_5817;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10965;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0483526;ClusterMaxSizeDiff=0.0483526;ClusterMaxEditDist=0.103979;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2290;DistBack=-1;DistForward=30546;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=7:29831193-29831206;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9896;PctRecOverlap=0.9896;SizeDiff=-24;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4971.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:32:0|1:15:0:0:26:./.:0:0:0:0:0/1:24:12:0/1:75:179:.:2484:.
chr7	30739409	HG2_PB_assemblyticsfalcon_24621	C	CCAGGCACGGGATCTCCAATTCATCATCAGACACAAGGATCCCCGATCCAGCCCAGCCACCAGGCCCTGAGACCCCCTCACT	20	PASS	ClusterIDs=HG2_PB_HySA_14646:HG2_PB_pbsv_8013:HG4_PB_assemblyticsfalcon_24056:HG3_PB_pbsv_7795:HG3_PB_assemblyticsfalcon_24467:HG2_PB_PB10Xdip_27396:HG3_Ill_GATKHCSBGrefine_5441:HG2_PB_assemblyticsfalcon_24621:HG2_PB_assemblyticsPBcR_23837:HG2_Ill_GATKHCSBGrefine_5518:HG4_PB_pbsv_8035:HG4_PB_HySA_11805:HG3_PB_HySA_12175;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5518:HG2_PB_assemblyticsPBcR_23837:HG2_PB_assemblyticsfalcon_24621:HG3_Ill_GATKHCSBGrefine_5441;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.319527;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=81;DistBack=9;DistForward=54551;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=167;REFWIDENED=7:30739319-30739485;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4972.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:28:0|1:15:0:1:29:./.:0:0:0:0:0/1:19:4:./.:.:.:.:.:.
chr7	30797834	HG3_PB_HySA_12176	G	GGCTTCACTGCAAGCTCCGCCTCCGGGTTCAGGCCATTCTCCTGCCTCAACCTCCCCAGTAGCTGGACTACGGTGCCCGTCACCACGCCCGGCTAATTTTTTGTATTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGTGAAAGTGCTTTTTTAAGGTAGTTTCACTCTTGTGCCCAAGCTGGCGTGCAATGGTGCGATCTCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5818:HG2_PB_assemblyticsfalcon_24622:HG2_PB_HySA_14647:HG2_PB_PB10Xdip_27397:HG3_PB_pbsv_7796:HG3_PB_HySA_12176:HG2_PB_pbsv_8014;NumClusterSVs=7;ExactMatchIDs=HG3_PB_HySA_12176;NumExactMatchSVs=1;ClusterMaxShiftDist=0.078341;ClusterMaxSizeDiff=0.0737327;ClusterMaxEditDist=0.20362;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=208;DistBack=1808;DistForward=250;DistMin=250;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=349;REFWIDENED=7:30797804-30798152;PctSeqSimilarity=0.9717;PctSizeSimilarity=0.963;PctRecOverlap=0.8249;SizeDiff=-8;StartDistance=-34;EndDistance=-34;GTMatch=0;TruScore=91;MatchId=4973.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:29:0|1:23:0:1:29:./.:0:0:0:0:./.:55:3:./.:.:.:.:.:.
chr7	31220670	HG2_Ill_GATKHC_13173	A	AATATATATATACACACACATATAAAAATATATAAATATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4845:HG3_PB_pbsv_7798:HG2_PB_pbsv_8015:HG2_PB_HySA_14649:HG4_PB_HySA_11808:HG3_PB_HySA_12180:HG2_PB_PB10Xdip_27399:HG2_PB_PB10Xdip_27398:HG2_Ill_breakscan11_3815:HG2_Ill_250bpfermikitraw_11036:HG3_Ill_manta_1882:HG3_Ill_150bpfermikitraw_10425:HG2_Ill_manta_2300:HG2_Ill_GATKHC_13173:HG2_Ill_GATKHCSBGrefine_5519:HG4_Ill_SVrefine2DISCOVARDovetail_5835:HG2_10X_SVrefine210Xhap12_5719:HG4_PB_SVrefine2PBcRDovetail_3967:HG2_PB_SVrefine2PBcRplusDovetail_10165:HG2_PB_SVrefine2PB10Xhap12_5819:HG2_PB_SVrefine2Falcon2Bionano_3949:HG2_Ill_SVrefine2DISCOVARplusDovetail_11942;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5519:HG2_Ill_GATKHC_13173:HG2_Ill_manta_2300:HG3_Ill_150bpfermikitraw_10425:HG3_Ill_manta_1882;NumExactMatchSVs=5;ClusterMaxShiftDist=0.137931;ClusterMaxSizeDiff=0.136986;ClusterMaxEditDist=0.260274;PBcalls=12;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=74;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=7:31220638-31220688;PctSeqSimilarity=0.9868;PctSizeSimilarity=0.9737;PctRecOverlap=0.974;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4974.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:76:1/1:0:16:1:9:./.:0:0:0:0:1/1:1:29:./.:.:.:.:.:.
chr7	31696780	HG2_PB_assemblyticsPBcR_23845	T	TATATTATATATATGATATATAATATATATTATATATCATATATAAATACACATATAAATATGTATGTGTATATATATCTATGTGCAGGCACACACATGCACACACACTTAAAAAACCTACTGGTTCCATTTCCCTGGAAAACTCTGACTAATACAGTAAGGAATAGCTAAGATATGGTGAGACTATCCTACAAAAATACATACTGAGTCCTGCCGTTTATTATTTATAAGAAGCAACTGAGCTCTGGGGTTAAATTCAGGATTTGGGGCTTAAATCCAACTCCACTACTTATTATTTGTCTTGGATAAACTATGTAACCTCCCTAAGGCTCAGTGTCATCATCTGTAATTTAACGGAGTTAATGCATACGGAGCCCTTTACAGCAAGACTGGAACATGGTTAGTGCTTAGCAAATGGTAGTACTATGATGGTTAGGATGGTGATGATACTAACAAGAGTAGTAACAACTTATTGAATGTCTACCTACAGGCAAGGGACACGGCTAAGTGCCTTATTTGCATTATCACTTATCTTCGCAACAATCTTGAAAAGTGGGAATTAATCTACACACACATA	20	PASS	ClusterIDs=HG3_PB_pbsv_7801:HG4_PB_pbsv_8038:HG3_PB_assemblyticsfalcon_24476:HG4_PB_HySA_11811:HG3_PB_SVrefine2Falcon1Dovetail_4847:HG4_PB_assemblyticsfalcon_24067:HG4_Ill_MetaSV_4852:HG3_Ill_MetaSV_4821:HG3_Ill_GATKHCSBGrefine_5444:HG2_PB_assemblyticsfalcon_24630:HG2_PB_assemblyticsPBcR_23845:HG2_PB_SVrefine2Falcon2Bionano_3952:HG2_PB_SVrefine2Falcon1plusDovetail_10969:HG2_Ill_SVrefine2DISCOVARplusDovetail_11947:HG2_Ill_MetaSV_4646:HG2_Ill_GATKHCSBGrefine_5520:HG2_10X_SVrefine210Xhap12_5721:HG4_Ill_SVrefine2DISCOVARDovetail_5838:HG4_Ill_GATKHCSBGrefine_5612:HG4_PB_SVrefine2PBcRDovetail_3968:HG3_PB_SVrefine2PBcRDovetail_3681:HG3_Ill_SVrefine2DISCOVARDovetail_6047:HG2_PB_SVrefine2PBcRplusDovetail_10167:HG2_PB_SVrefine2PB10Xhap12_5823:HG2_PB_PB10Xdip_27416:HG2_PB_PB10Xdip_27415:HG2_Ill_breakscan11_3816:HG2_PB_pbsv_8018;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5721:HG2_Ill_GATKHCSBGrefine_5520:HG2_Ill_MetaSV_4646:HG2_Ill_SVrefine2DISCOVARplusDovetail_11947:HG2_PB_SVrefine2Falcon1plusDovetail_10969:HG2_PB_SVrefine2Falcon2Bionano_3952:HG2_PB_assemblyticsPBcR_23845:HG2_PB_assemblyticsfalcon_24630:HG3_Ill_GATKHCSBGrefine_5444:HG3_Ill_MetaSV_4821:HG4_Ill_MetaSV_4852:HG4_PB_assemblyticsfalcon_24067;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0630324;ClusterMaxSizeDiff=0.0545145;ClusterMaxEditDist=0.178268;PBcalls=17;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=576;DistBack=10;DistForward=5368;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=7:31696781-31696780;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4975.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:./.:0:4:0:7:./.:0:0:0:0:1/1:0:33:1/1:3:69:.:.:.
chr7	31901975	HG3_PB_SVrefine2Falcon1Dovetail_4848	A	AACTGAATGCTATAGGCTGGGTGACTTATAAACAACAGAAATTTATTTCTCACAGTTCTGGAGGCTAGGAAGCTTAAGAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4848:HG2_PB_HySA_14654:HG2_PB_pbsv_8020:HG4_PB_HySA_11812:HG4_PB_pbsv_8040:HG4_PB_assemblyticsfalcon_24072:HG2_PB_PB10Xdip_27417:HG2_PB_PB10Xdip_27418:HG3_Ill_250bpfermikitraw_10717:HG2_PB_SVrefine2PB10Xhap12_5824:HG3_PB_HySA_12188:HG4_Ill_SVrefine2DISCOVARDovetail_5839;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_4848:HG4_Ill_SVrefine2DISCOVARDovetail_5839;NumExactMatchSVs=2;ClusterMaxShiftDist=0.258065;ClusterMaxSizeDiff=0.245161;ClusterMaxEditDist=0.32;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=79;DistBack=-79;DistForward=40;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=158;REFWIDENED=7:31901976-31902133;PctSeqSimilarity=0.9897;PctSizeSimilarity=1;PctRecOverlap=0.7848;SizeDiff=0;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=92;MatchId=4976.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:30:1|0:1:32:23:0:./.:0:0:0:0:0/1:29:9:./.:.:.:.:.:.
chr7	32654181	HG3_Ill_Spiral_8655	CA	AACTTTAAATGCATAATAGATATTTAGTTACTCTTAGTAGATAGTTTTCCCAATTTTTGGAGGAAAAACTTGAGCCGAAGTAGAACTCAAATTTAGATCAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_8032:HG4_PB_assemblyticsfalcon_24086:HG2_PB_assemblyticsfalcon_24642:HG3_Ill_GATKHCSBGrefine_5451:HG2_Ill_GATKHCSBGrefine_5531:HG3_Ill_svaba_10318:HG3_Ill_Krunchall_11055:HG3_Ill_250bpfermikitraw_10730:HG3_Ill_150bpfermikitraw_10448:HG2_PB_SVrefine2Falcon1plusDovetail_10977:HG2_Ill_svaba_10229:HG2_Ill_Krunchall_11336:HG2_Ill_250bpfermikitraw_11055:HG2_PB_HySA_14668:HG3_PB_HySA_12204:HG3_PB_assemblyticsfalcon_24494:HG3_PB_SVrefine2PBcRDovetail_3687:HG3_PB_SVrefine2Falcon1Dovetail_4855:HG3_Ill_manta_1885:HG3_Ill_Spiral_8655:HG3_Ill_SVrefine2DISCOVARDovetail_6056:HG3_Ill_Cortex_3420:HG2_PB_SVrefine2Falcon2Bionano_3957:HG2_Ill_manta_2305:HG2_Ill_SpiralSDKrefine_15703:HG2_Ill_Cortex_8278:HG2_10X_SVrefine210Xhap12_5729:HG3_Ill_MetaSV_4823:HG3_PB_pbsv_7810;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5729:HG2_Ill_Cortex_8278:HG2_Ill_SpiralSDKrefine_15703:HG2_Ill_manta_2305:HG2_PB_SVrefine2Falcon2Bionano_3957:HG3_Ill_Cortex_3420:HG3_Ill_SVrefine2DISCOVARDovetail_6056:HG3_Ill_Spiral_8655:HG3_Ill_manta_1885:HG3_PB_SVrefine2Falcon1Dovetail_4855:HG3_PB_SVrefine2PBcRDovetail_3687:HG3_PB_assemblyticsfalcon_24494;NumExactMatchSVs=12;ClusterMaxShiftDist=0.175258;ClusterMaxSizeDiff=0.14433;ClusterMaxEditDist=0.251309;PBcalls=11;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=15;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=100;DistBack=3;DistForward=10679;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:32654183-32654180;PctSeqSimilarity=1;PctSizeSimilarity=0.9901;PctRecOverlap=0.9902;SizeDiff=-1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4977.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:23:./.:12:12:3:17:./.:0:0:0:0:0/1:32:15:./.:.:.:.:.:.
chr7	33195317	HG2_Ill_breakscan11_3818	A	AGAAATATTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_14682:HG2_PB_pbsv_8035:HG4_PB_pbsv_8049:HG2_Ill_breakscan11_3818:HG4_Ill_MetaSV_4856:HG2_PB_SVrefine2Falcon1plusDovetail_10978;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_breakscan11_3818;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0692521;ClusterMaxSizeDiff=0.0498615;ClusterMaxEditDist=0.195387;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=352;DistBack=-8;DistForward=-1;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=7:33195318-33195317;PctSeqSimilarity=0.9902;PctSizeSimilarity=0.9805;PctRecOverlap=0.9833;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4978.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:21:0|1:33:0:1:20:./.:0:0:0:0:0/1:31:7:0/1:13:20:.:.:.
chr7	33788689	HG4_Ill_MetaSV_4859	G	GGAACAGCTCATCCCAGCTTTGACGAACCTGACTCATCCCACCAAAGGTGGAATGCGACTGTTCCCTTGCCAGGGTGGGTTTTATTCCTGAGTCGGGCACCTAAGGAGAGTTTCCAGGATAATTCTGGAGAGGAGTATTGGAAAGGGTGAGAGACGTCTGAAGGTTTCTTAGAAAAGGACCAGAAGCATCTTCCTGGGTAGGAGACACATTCGGGTTTTACAGTAGTGGGACAACA	20	PASS	ClusterIDs=HG3_PB_pbsv_7815:HG4_PB_pbsv_8053:HG4_PB_assemblyticsfalcon_24100:HG3_PB_assemblyticsfalcon_24509:HG3_PB_HySA_12216:HG4_Ill_svaba_10371:HG4_Ill_SVrefine2DISCOVARDovetail_5849:HG4_Ill_MetaSV_4859:HG4_Ill_GATKHCSBGrefine_5626:HG4_Ill_Cortex_3405:HG3_PB_SVrefine2PBcRDovetail_3689:HG3_PB_SVrefine2Falcon1Dovetail_4860:HG3_Ill_svaba_10326:HG3_Ill_SVrefine2DISCOVARDovetail_6064:HG3_Ill_MetaSV_4825:HG3_Ill_GATKHCSBGrefine_5454:HG3_Ill_Cortex_3422:HG2_PB_SVrefine2PB10Xhap12_5838:HG2_PB_SVrefine2Falcon2Bionano_3960:HG2_PB_SVrefine2Falcon1plusDovetail_10982:HG2_Ill_svaba_10237:HG2_Ill_SVrefine2DISCOVARplusDovetail_11960:HG2_Ill_MetaSV_4652:HG2_Ill_GATKHCSBGrefine_5537:HG2_Ill_Cortex_8280:HG2_10X_SVrefine210Xhap12_5733:HG4_Ill_Spiral_659:HG3_Ill_Spiral_8663:HG2_PB_PB10Xdip_27434:HG2_PB_PB10Xdip_27433:HG2_Ill_breakscan11_3819:HG2_Ill_Spiral_575:HG2_PB_pbsv_8040;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5733:HG2_Ill_Cortex_8280:HG2_Ill_GATKHCSBGrefine_5537:HG2_Ill_MetaSV_4652:HG2_Ill_SVrefine2DISCOVARplusDovetail_11960:HG2_Ill_svaba_10237:HG2_PB_SVrefine2Falcon1plusDovetail_10982:HG2_PB_SVrefine2Falcon2Bionano_3960:HG2_PB_SVrefine2PB10Xhap12_5838:HG3_Ill_Cortex_3422:HG3_Ill_GATKHCSBGrefine_5454:HG3_Ill_MetaSV_4825:HG3_Ill_SVrefine2DISCOVARDovetail_6064:HG3_Ill_svaba_10326:HG3_PB_SVrefine2Falcon1Dovetail_4860:HG3_PB_SVrefine2PBcRDovetail_3689:HG4_Ill_Cortex_3405:HG4_Ill_GATKHCSBGrefine_5626:HG4_Ill_MetaSV_4859:HG4_Ill_SVrefine2DISCOVARDovetail_5849:HG4_Ill_svaba_10371;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0578512;ClusterMaxSizeDiff=0.0578512;ClusterMaxEditDist=0.218557;PBcalls=13;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=235;DistBack=15559;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:33788690-33788690;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4980.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:1/1:0:22:0:18:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr7	34087395	HG2_PB_SVrefine2Falcon2Bionano_3962	T	TTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTTCCCCTCCCTCCCTCCCTCCCTCCGTTCCTTCCTTCCTTCCTTCCCTCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5736:HG4_PB_assemblyticsfalcon_24103:HG3_PB_pbsv_7817:HG3_PB_HySA_12219:HG2_PB_pbsv_8042:HG2_PB_PB10Xdip_27436:HG4_PB_pbsv_8055:HG2_PB_PB10Xdip_27435:HG2_Ill_breakscan11_3820:HG4_PB_HySA_11845:HG2_PB_HySA_14689:HG3_Ill_GATKHCSBGrefine_5456:HG2_Ill_GATKHCSBGrefine_5539:HG4_Ill_GATKHCSBGrefine_5628:HG4_Ill_150bpfermikitraw_10622:HG3_PB_SVrefine2Falcon1Dovetail_4862:HG2_PB_SVrefine2PB10Xhap12_5840:HG2_PB_SVrefine2Falcon1plusDovetail_10984:HG4_Ill_SVrefine2DISCOVARDovetail_5851:HG3_PB_SVrefine2PBcRDovetail_3691:HG3_Ill_SVrefine2DISCOVARDovetail_6067:HG2_PB_SVrefine2Falcon2Bionano_3962:HG2_Ill_SVrefine2DISCOVARplusDovetail_11963;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11963:HG2_PB_SVrefine2Falcon2Bionano_3962:HG3_Ill_SVrefine2DISCOVARDovetail_6067:HG3_PB_SVrefine2PBcRDovetail_3691:HG4_Ill_SVrefine2DISCOVARDovetail_5851;NumExactMatchSVs=5;ClusterMaxShiftDist=0.231076;ClusterMaxSizeDiff=0.231076;ClusterMaxEditDist=0.289157;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=134;DistBack=19190;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=7:34087396-34087428;PctSeqSimilarity=0.9799;PctSizeSimilarity=0.971;PctRecOverlap=0.8993;SizeDiff=-4;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=95;MatchId=4981.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:./.:2:13:0:4:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr7	34832301	HG3_Ill_GATKHCSBGrefine_5458	G	GTATATATATATATTTATATATATATGTATATATATATATTTATATATATATGTATATATATATTTATATATATATGTATATATATATATTTATATATATATGTATATATATATATT	20	PASS	ClusterIDs=HG2_PB_pbsv_8044:HG2_PB_SVrefine2Falcon1plusDovetail_10986:HG3_PB_pbsv_7819:HG2_Ill_SVrefine2DISCOVARplusDovetail_11968:HG3_Ill_GATKHC_13170:HG4_Ill_SVrefine2DISCOVARDovetail_5853:HG3_Ill_GATKHCSBGrefine_5458:HG2_Ill_GATKHC_13209:HG2_PB_HySA_14697:HG2_PB_assemblyticsfalcon_24659;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHC_13209:HG3_Ill_GATKHCSBGrefine_5458:HG3_Ill_GATKHC_13170;NumExactMatchSVs=3;ClusterMaxShiftDist=0.228814;ClusterMaxSizeDiff=0.220339;ClusterMaxEditDist=0.283333;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=116;DistBack=14;DistForward=25;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=185;REFWIDENED=7:34832162-34832346;PctSeqSimilarity=0.9558;PctSizeSimilarity=0.9062;PctRecOverlap=0.7674;SizeDiff=-12;StartDistance=24;EndDistance=24;GTMatch=0;TruScore=87;MatchId=4982.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:23:0|1:29:4:2:18:./.:0:0:0:0:0/1:25:11:./.:.:.:.:.:.
chr7	34840441	HG3_PB_assemblyticsfalcon_24519	TAAAGAAGAAAAG	GACTTTTACTGATTGCCATTCTAACTGGTGTGAGATGGTATCTCACTACAGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGTGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAAAAGTGTCTGTCATGTCCTTCGCCCACTTTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCCTTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCATTACTGGGTATTTACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAGGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATGGAAATCATCATTCTCAGTAAACTATCACAAGAACAAAAAACAAACACCGCATATTCTCACTCATAGGTGGGAACTGAACAGTGAGAACACATGGACACAGGAAGGGGAACATCACACTCTGGGACTGTTGTGGGTGGGCGGAGGGGGAGGGATAGCTTTAGGAGATATACCTAATGCTAAATGATGAGTTAATGGGTGCAGCATACTAGCATGGTACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATATAATAAAATAAAAGAATTGCTTGTGGTTATAAAATAATAAAAATGAGTTGTCTAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_8058:HG2_PB_HySA_14698:HG3_PB_pbsv_7820:HG2_PB_pbsv_8045:HG4_PB_assemblyticsfalcon_24110:HG3_PB_assemblyticsfalcon_24519:HG3_PB_SVrefine2Falcon1Dovetail_4864:HG2_PB_SVrefine2PB10Xhap12_5843:HG2_10X_SVrefine210Xhap12_5739:HG3_PB_SVrefine2PBcRDovetail_3694:HG2_PB_SVrefine2Falcon1plusDovetail_10987:HG2_PB_SVrefine2Falcon2Bionano_3964;NumClusterSVs=12;ExactMatchIDs=HG3_PB_assemblyticsfalcon_24519;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0732394;ClusterMaxSizeDiff=0.0732394;ClusterMaxEditDist=0.209814;PBcalls=11;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=848;DistBack=8105;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:34840449-34840440;PctSeqSimilarity=0.9862;PctSizeSimilarity=0.9604;PctRecOverlap=0.9751;SizeDiff=-35;StartDistance=0;EndDistance=12;GTMatch=0;TruScore=97;MatchId=4983.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:33:1:21:./.:0:0:0:0:./.:0:0:./.:11:160:.:.:.
chr7	36252151	HG2_Ill_SVrefine2DISCOVARplusDovetail_11971	T	TAATGTAGTGGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGTCGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCCCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGC	20	PASS	ClusterIDs=HG3_PB_HySA_12236:HG3_PB_pbsv_7824:HG2_PB_PB10Xdip_27441:HG2_PB_pbsv_8048:HG2_PB_assemblyticsPBcR_23889:HG4_PB_pbsv_8063:HG3_PB_assemblyticsfalcon_24527:HG2_PB_PB10Xdip_27440:HG4_PB_HySA_11863:HG3_PB_SVrefine2PBcRDovetail_3698:HG4_PB_SVrefine2PBcRDovetail_3976:HG2_PB_SVrefine2PBcRplusDovetail_10179:HG2_PB_SVrefine2PB10Xhap12_5847:HG2_Ill_SVrefine2DISCOVARplusDovetail_11971:HG4_Ill_MetaSV_4865:HG2_PB_SVrefine2Falcon1plusDovetail_10989:HG3_PB_SVrefine2Falcon1Dovetail_4865:HG3_Ill_SVrefine2DISCOVARDovetail_6074:HG3_Ill_MetaSV_4828:HG2_Ill_MetaSV_4656:HG2_10X_SVrefine210Xhap12_5744;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11971:HG2_PB_SVrefine2PB10Xhap12_5847:HG2_PB_SVrefine2PBcRplusDovetail_10179:HG4_PB_SVrefine2PBcRDovetail_3976;NumExactMatchSVs=4;ClusterMaxShiftDist=0.125196;ClusterMaxSizeDiff=0.125196;ClusterMaxEditDist=0.237594;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=321;DistBack=54198;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:36252152-36252166;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4984.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:22:0:23:./.:0:0:0:0:1/1:0:25:1/1:1:55:.:.:.
chr7	37567440	HG2_PB_SVrefine2Falcon1plusDovetail_10994	G	GTATATCTATAGATAGATATATCGTCTATATCTATAGATAGATATATCGTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10994:HG3_PB_pbsv_7833:HG2_PB_PB10Xdip_27450:HG2_PB_PB10Xdip_27449:HG2_PB_SVrefine2PBcRplusDovetail_10184:HG4_PB_pbsv_8070:HG2_PB_SVrefine2PB10Xhap12_5852;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10994:HG2_PB_SVrefine2PBcRplusDovetail_10184:HG2_PB_SVrefine2PB10Xhap12_5852;NumExactMatchSVs=3;ClusterMaxShiftDist=0.134615;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.348624;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=50;DistBack=69569;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=204;REFWIDENED=7:37567441-37567644;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4985.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:75:./.:5:9:0:1:./.:0:0:0:0:0/1:23:15:./.:.:.:.:.:.
chr7	37836636	HG2_Ill_MetaSV_4660	T	TTGCTCCCCTCTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3821:HG4_PB_pbsv_8072:HG2_PB_pbsv_8057:HG2_PB_PB10Xdip_27451:HG3_PB_pbsv_7835:HG2_PB_HySA_14727:HG2_PB_assemblyticsPBcR_23903:HG3_PB_assemblyticsfalcon_24541:HG3_PB_HySA_12250:HG4_PB_HySA_11873:HG4_Ill_manta_1985:HG4_Ill_MetaSV_4870:HG4_Ill_GATKHCSBGrefine_5642:HG3_Ill_MetaSV_4833:HG2_PB_SVrefine2PBcRplusDovetail_10185:HG2_PB_SVrefine2PB10Xhap12_5853:HG2_Ill_MetaSV_4660:HG2_Ill_GATKHCSBGrefine_5553:HG2_10X_SVrefine210Xhap12_5752:HG2_PB_SVrefine2Falcon1plusDovetail_10995:HG3_PB_SVrefine2Falcon1Dovetail_4871:HG2_PB_HySA_14726;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5752:HG2_Ill_GATKHCSBGrefine_5553:HG2_Ill_MetaSV_4660:HG2_PB_SVrefine2PB10Xhap12_5853:HG2_PB_SVrefine2PBcRplusDovetail_10185:HG3_Ill_MetaSV_4833:HG4_Ill_GATKHCSBGrefine_5642:HG4_Ill_MetaSV_4870:HG4_Ill_manta_1985;NumExactMatchSVs=9;ClusterMaxShiftDist=0.166395;ClusterMaxSizeDiff=0.166395;ClusterMaxEditDist=0.229508;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=309;DistBack=149287;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:37836637-37836651;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4986.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:./.:0:0:0:4:./.:0:0:0:0:1/1:0:20:1/1:2:64:.:.:.
chr7	38116186	HG2_PB_HySA_14736	T	TCTTTGTCTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3822:HG4_PB_assemblyticsfalcon_24137:HG2_PB_pbsv_8059:HG4_PB_pbsv_8074:HG4_PB_SVrefine2Falcon1Dovetail_4915:HG2_PB_HySA_14736:HG2_PB_SVrefine2Falcon1plusDovetail_10998:HG4_PB_HySA_11881;NumClusterSVs=8;ExactMatchIDs=HG2_PB_HySA_14736;NumExactMatchSVs=1;ClusterMaxShiftDist=0.163462;ClusterMaxSizeDiff=0.160256;ClusterMaxEditDist=0.196774;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=2970;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:38116187-38116201;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4987.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:31:0|1:35:2:2:26:./.:0:0:0:0:0/1:35:15:0/1:11:28:.:.:.
chr7	39033160	HG2_PB_SVrefine2PBcRplusDovetail_10190	A	AGCACTTGAACTGACACTGATCAACACTGATATTTGAATTGCAGGATTTTAAACACACACACACACACACACACACACACACACACACACACATCAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11002:HG2_10X_SVrefine210Xhap12_5755:HG2_PB_pbsv_8063:HG3_PB_pbsv_7839:HG3_PB_HySA_12262:HG2_PB_PB10Xdip_27458:HG2_PB_PB10Xdip_27457:HG3_Ill_GATKHC_13211:HG2_Ill_GATKHC_13249:HG2_PB_HySA_14745:HG2_PB_SVrefine2PBcRplusDovetail_10190:HG2_PB_SVrefine2PB10Xhap12_5860;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11002:HG2_PB_SVrefine2PBcRplusDovetail_10190:HG2_PB_SVrefine2PB10Xhap12_5860;NumExactMatchSVs=3;ClusterMaxShiftDist=0.152284;ClusterMaxSizeDiff=0.152284;ClusterMaxEditDist=0.235294;PBcalls=9;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=96;DistBack=57657;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=88;REFWIDENED=7:39033161-39033248;PctSeqSimilarity=0.9764;PctSizeSimilarity=0.9688;PctRecOverlap=0.433;SizeDiff=3;StartDistance=-53;EndDistance=-53;GTMatch=0;TruScore=79;MatchId=4988.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:51:0|1:29:1:2:49:./.:0:0:0:0:0/1:18:6:./.:.:.:.:.:.
chr7	39749704	HG3_PB_SVrefine2Falcon1Dovetail_4879	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCACCTCCATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11005:HG3_PB_pbsv_7843:HG3_PB_assemblyticsfalcon_24558:HG3_PB_SVrefine2Falcon1Dovetail_4879:HG2_PB_assemblyticsfalcon_24705:HG2_PB_pbsv_8067;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_4879;NumExactMatchSVs=1;ClusterMaxShiftDist=0.146487;ClusterMaxSizeDiff=0.146487;ClusterMaxEditDist=0.218236;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=325;DistBack=-1;DistForward=55495;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=7:39749705-39749709;PctSeqSimilarity=0.9854;PctSizeSimilarity=0.9701;PctRecOverlap=0.9522;SizeDiff=-10;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=96;MatchId=4989.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:47:18:0|1:38:1:1:15:./.:0:0:0:0:0/1:34:4:0/1:10:32:.:.:.
chr7	40412882	HG2_PB_SVrefine2PB10Xhap12_5864	G	GAATTCAGAATCTATAGATTCTAGAAAATTTAGAATCTATAGATTCTAGAAAATTTAGAATCTATAGATTCTAGAAAATTTAGAATCTATAGATTCTAGAAAATTTAGAATCTATGGATTCTAGAAAATTTAGAATCTATGGATTCTAGAAAATTTAGAATCTATGGATTCTAGAA	20	PASS	ClusterIDs=HG2_PB_HySA_14760:HG2_PB_PB10Xdip_27506:HG3_PB_HySA_12276:HG2_PB_PB10Xdip_27505:HG2_PB_pbsv_8068:HG4_Ill_SVrefine2DISCOVARDovetail_5887:HG4_PB_pbsv_8085:HG2_PB_SVrefine2PBcRplusDovetail_10193:HG2_PB_SVrefine2PB10Xhap12_5864:HG3_PB_SVrefine2PBcRDovetail_3707:HG4_PB_SVrefine2PBcRDovetail_3988:HG3_Ill_SVrefine2DISCOVARDovetail_6095:HG3_PB_pbsv_7844:HG2_PB_SVrefine2Falcon1plusDovetail_11006:HG2_Ill_SVrefine2DISCOVARplusDovetail_11993:HG4_PB_SVrefine2Falcon1Dovetail_4920;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5864:HG2_PB_SVrefine2PBcRplusDovetail_10193:HG4_Ill_SVrefine2DISCOVARDovetail_5887;NumExactMatchSVs=3;ClusterMaxShiftDist=0.284091;ClusterMaxSizeDiff=0.284091;ClusterMaxEditDist=0.37464;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=175;DistBack=49021;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=90;REFWIDENED=7:40412883-40412972;PctSeqSimilarity=0.9948;PctSizeSimilarity=1;PctRecOverlap=0.9143;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=1;TruScore=96;MatchId=4990.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:0:13:0:5:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr7	42647643	HG4_PB_assemblyticsfalcon_24160	ACCAAAAGTCTTTATCT	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3824:HG2_PB_pbsv_8075:HG4_PB_pbsv_8094:HG4_PB_SVrefine2Falcon1Dovetail_4924:HG4_PB_assemblyticsfalcon_24160:HG2_PB_assemblyticsfalcon_24721:HG2_Ill_MetaSV_4669:HG3_PB_pbsv_7849:HG4_Ill_MetaSV_4882:HG2_Ill_GATKHCSBGrefine_5560:HG2_PB_SVrefine2Falcon1plusDovetail_11011;NumClusterSVs=11;ExactMatchIDs=HG4_PB_assemblyticsfalcon_24160;NumExactMatchSVs=1;ClusterMaxShiftDist=0.208955;ClusterMaxSizeDiff=0.208955;ClusterMaxEditDist=0.251497;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=42678;DistForward=-6;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:42647660-42647642;PctSeqSimilarity=0.977;PctSizeSimilarity=0.9508;PctRecOverlap=0.9754;SizeDiff=-16;StartDistance=0;EndDistance=16;GTMatch=0;TruScore=96;MatchId=4991.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:22:0|1:41:1:2:22:./.:0:0:0:0:0/1:37:10:0/1:28:22:.:.:.
chr7	43044113	HG2_PB_SVrefine2PB10Xhap12_5872	T	TTATATATACATACATATATACACACACATATATTTATGTATACATATATACACATATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_10198:HG2_PB_PB10Xdip_27524:HG4_PB_pbsv_8096:HG2_PB_pbsv_8076:HG4_PB_SVrefine2PBcRDovetail_3993:HG4_PB_SVrefine2Falcon1Dovetail_4925:HG2_PB_SVrefine2PB10Xhap12_5872;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5872:HG4_PB_SVrefine2Falcon1Dovetail_4925:HG4_PB_SVrefine2PBcRDovetail_3993;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0862069;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.302521;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=58;DistBack=38945;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=61;REFWIDENED=7:43044112-43044175;PctSeqSimilarity=0.9688;PctSizeSimilarity=0.9655;PctRecOverlap=0.339;SizeDiff=2;StartDistance=-38;EndDistance=-38;GTMatch=0;TruScore=75;MatchId=4992.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:33:./.:13:21:11:5:./.:0:0:0:0:0/0:38:1:./.:.:.:.:.:.
chr7	43049700	HG3_Ill_150bpfermikitraw_10522	C	CATATATATATATATATATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG3_PB_pbsv_7851:HG3_Ill_GATKHCSBGrefine_5478:HG2_PB_pbsv_8077:HG3_Ill_150bpfermikitraw_10522:HG4_PB_assemblyticsfalcon_24163:HG2_Ill_GATKHC_13284:HG2_Ill_GATKHCSBGrefine_5561:HG2_Ill_150bpfermikitraw_10470;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10470:HG2_Ill_GATKHCSBGrefine_5561:HG2_Ill_GATKHC_13284:HG3_Ill_150bpfermikitraw_10522:HG3_Ill_GATKHCSBGrefine_5478;NumExactMatchSVs=5;ClusterMaxShiftDist=0.150943;ClusterMaxSizeDiff=0.150943;ClusterMaxEditDist=0.300885;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=5310;DistForward=13230;DistMin=5310;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=7:43049701-43049712;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4993.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:./.:24:6:7:18:./.:0:0:0:0:0/1:20:9:./.:.:.:.:.:.
chr7	43770557	HG2_PB_SVrefine2Falcon1plusDovetail_11013	T	TTCGTCTAAATTTTACATTAAAAACAAAACTCTATAGTGAATAATGTTACCTATCCAATATTCATTTTCCTCTAACTCCTTTGTACCAAAATCCTTATTTTATTCAGATAGCTGCCCTGTTCCCAGAATCAAAATGATACTGATTAAACCAGTCATCACACAGAATTTTTTTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11013:HG2_PB_PB10Xdip_27527:HG2_PB_pbsv_8080:HG3_PB_pbsv_7853:HG2_PB_SVrefine2PB10Xhap12_5874:HG2_PB_SVrefine2PBcRplusDovetail_10200;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11013:HG2_PB_SVrefine2PBcRplusDovetail_10200;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0795455;ClusterMaxSizeDiff=0.0795455;ClusterMaxEditDist=0.171745;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=172;DistBack=20582;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=344;REFWIDENED=7:43770558-43770901;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4994.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:21:1|0:0:23:17:0:./.:0:0:0:0:0/1:18:9:./.:.:.:.:.:.
chr7	44368142	HG3_Ill_SVrefine2DISCOVARDovetail_6108	G	GTGGTGGTGGTAGTGATGGTGGTGATGATAGTGATGGTGGTAAGGGTGGTGGTGATGGTGGTGGTGGTGATGGTAGTGATGATAATGATAATGATAGTGTTGGTGGTGATGGTGGTGGTGATAGTGGTGGTGGTGGTGATGATGGTGGTGGTGGTGATGGTAGTGCTGCTGATGGTGGTGGTGGTGGTAATGGTGGTGGTGGTAATGGTGATGGTGATGATGGTAATAGTGGTGGGGATGGCGATGGTGGTGGTGGTTATGATAATGATGGTAATGCTGATGCTGGTGGTGGTGATGGTGGTAGTGATGGCCGTGGTGATAGTTGTGTCAATGGTGGTGGTGGTGTCAA	20	PASS	ClusterIDs=HG3_PB_pbsv_7859:HG4_Ill_MetaSV_4885:HG2_Ill_MetaSV_4671:HG4_Ill_GATKHCSBGrefine_5657:HG2_Ill_manta_2320:HG3_PB_assemblyticsfalcon_24577:HG4_PB_SVrefine2Falcon1Dovetail_4930:HG2_PB_SVrefine2PB10Xhap12_5879:HG4_PB_SVrefine2PBcRDovetail_3997:HG4_Ill_SVrefine2DISCOVARDovetail_5896:HG3_Ill_SVrefine2DISCOVARDovetail_6108:HG2_PB_SVrefine2PBcRplusDovetail_10203:HG2_Ill_SVrefine2DISCOVARplusDovetail_12007:HG3_PB_SVrefine2PBcRDovetail_3714:HG3_PB_SVrefine2Falcon1Dovetail_4882:HG3_PB_HySA_12298:HG4_PB_pbsv_8104;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12007:HG2_PB_SVrefine2PBcRplusDovetail_10203:HG3_Ill_SVrefine2DISCOVARDovetail_6108:HG4_Ill_SVrefine2DISCOVARDovetail_5896;NumExactMatchSVs=4;ClusterMaxShiftDist=0.144509;ClusterMaxSizeDiff=0.144509;ClusterMaxEditDist=0.202312;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=348;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=157;REFWIDENED=7:44368143-44368299;PctSeqSimilarity=0.9986;PctSizeSimilarity=1;PctRecOverlap=0.9685;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=1;TruScore=98;MatchId=4995.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:0:41:0:7:./.:0:0:0:0:1/1:0:32:1/1:1:112:.:.:.
chr7	44663095	HG3_Ill_SVrefine2DISCOVARDovetail_6110	T	TTTTACTTATTCTCCAATTAATCCTAATCCTAATTCTAAATTAATTAATCCTTGTTGCCTTTCTTCTAATTGTTTTATATATATGTAATATGTAAATTTAAAGAACATCGTATG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12009:HG3_PB_pbsv_7862:HG2_PB_HySA_14806:HG2_10X_SVrefine210Xhap12_5772:HG3_PB_HySA_12301:HG2_PB_pbsv_8090:HG3_PB_SVrefine2PBcRDovetail_3717:HG3_Ill_SVrefine2DISCOVARDovetail_6110:HG3_Ill_250bpfermikitraw_10816;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12009:HG3_PB_SVrefine2PBcRDovetail_3717:HG3_Ill_SVrefine2DISCOVARDovetail_6110:HG3_Ill_250bpfermikitraw_10816;NumExactMatchSVs=4;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.251046;PBcalls=5;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=113;DistBack=26330;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=117;REFWIDENED=7:44663096-44663212;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4996.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:20:0|1:24:0:0:23:./.:0:0:0:0:0/1:19:33:./.:.:.:.:.:.
chr7	45001049	HG2_PB_PB10Xdip_27542	C	CTGAGGGCTGAGGGATTGAGGAGGCTGAGGGCTGAGGGGCTGAGGGAGTTGAGGGGTTGAGGGGGCTGACGGCTGAGGGCTGAGGGGCTAAGGAGGCTGAGGGGCTGAGGGGCTGGGGGGCTGGGGGGCTGAGGGGGCTGAGGGGCTGAGTTGT	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_27542:HG4_PB_SVrefine2Falcon1Dovetail_4933:HG2_PB_HySA_14811:HG4_PB_pbsv_8111:HG2_PB_PB10Xdip_27543:HG3_PB_pbsv_7867:HG2_PB_pbsv_8095;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_27542:HG2_PB_PB10Xdip_27543;NumExactMatchSVs=2;ClusterMaxShiftDist=0.123457;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.25;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=153;DistBack=81;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1229;REFWIDENED=7:45000414-45001642;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9935;PctRecOverlap=0.9871;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4997.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:6:21:1/1:3:11:1:7:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr7	45032168	HG2_Ill_SVrefine2DISCOVARplusDovetail_12013	A	ACACCTCCCAGACGGCCTGGCGGCCGGGCAGAGGGGCTCCTCACTTCCCAGACGGGGCGGCTGGGCAGAGGCGCCCCCCACCTCCCGGACGGGGCGGCGGCCGGGCGGAGGCGCCCCCACCTCCCGGACGGGGCGGCTGCCGGGCGGGGGCTGCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGCTGCCCCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4886:HG3_PB_pbsv_7868:HG4_PB_pbsv_8112:HG2_PB_HySA_14812:HG2_PB_pbsv_8096:HG3_Ill_MetaSV_4843:HG3_Ill_manta_1898:HG2_Ill_MetaSV_4674:HG2_PB_PB10Xdip_27545:HG4_Ill_GATKHCSBGrefine_5662:HG3_Ill_GATKHCSBGrefine_5483:HG2_Ill_GATKHCSBGrefine_5566:HG2_PB_PB10Xdip_27544:HG3_PB_HySA_12309:HG4_Ill_SVrefine2DISCOVARDovetail_5901:HG3_PB_SVrefine2PBcRDovetail_3720:HG3_Ill_SVrefine2DISCOVARDovetail_6113:HG2_PB_SVrefine2PBcRplusDovetail_10208:HG2_PB_SVrefine2PB10Xhap12_5889:HG2_Ill_SVrefine2DISCOVARplusDovetail_12013:HG2_10X_SVrefine210Xhap12_5774:HG4_PB_SVrefine2Falcon1Dovetail_4934;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5774:HG2_Ill_SVrefine2DISCOVARplusDovetail_12013:HG2_PB_SVrefine2PB10Xhap12_5889:HG2_PB_SVrefine2PBcRplusDovetail_10208:HG3_Ill_SVrefine2DISCOVARDovetail_6113:HG3_PB_SVrefine2PBcRDovetail_3720:HG4_Ill_SVrefine2DISCOVARDovetail_5901;NumExactMatchSVs=7;ClusterMaxShiftDist=0.287179;ClusterMaxSizeDiff=0.287179;ClusterMaxEditDist=0.317949;PBcalls=12;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=203;DistBack=30792;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=144;REFWIDENED=7:45032169-45032312;PctSeqSimilarity=0.9819;PctSizeSimilarity=1;PctRecOverlap=0.7833;SizeDiff=0;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=92;MatchId=4998.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:32:1/1:1:10:0:11:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr7	46283006	HG2_PB_PB10Xdip_27557	A	AAAAAAAAAAAAGAAAACAGATTGGCCATTTCTTAAAATAACAGACAATCCTATAGTACACCTGTGGGTTTTTCCCAAGAAAAAGGAAATTGTACATCCATACAAAGACTTGCACACAAATGTTCATAGCAGATTCATTTGTAATAGCTCCAAACTATTTAGAAACAACCTAAATGTCCATCAGCAGGTAACTGGATAAACAAATTGTTATATATCCATATAGTAGAATTGAGTGAAAATAACAAACTTAAAGTGATTTTCCTATTCTCTCACTCAATGACAATCAACAAGAAGCCTTCTGTTACCAAATGTGTGGTGTTTTCCCTCATATATTAAGCAAGCATCGTTTCTGCAGTGGCTACAAGCTGTAGATCCTCTAGTTCAGTTCAGACACTATCTACCTGGCTATAGCATCAGATTCCACAGGTTGAGGGTTCAGTCCCCAGTACTGGTCCCCCACTTCCAATACCAATTGCAAGCTCTGGGTTATTTTACCTGTGCATCTGACCAACCAACTATAAATCAGGATTGCTACACCACCCTCTTTGTGTGTGATTTGCTGGAGCAGCTTGCAGAACTCAGGAAAACACTTATTCACATTTACCAGTTTATCATAAAGGATATTACAAAGGATACAGATGAAGAGATGCATGGGGCAAGGTACAGGCAAAGGAGCCAAGAGCTTCCATGTGCTATCTGGGTGCACCGCCCTCCGTGAACCTCTAGGTATTCTGCTCTCTGGAAGTTTTCCAAACCCTGTCCTTTTAGGTTTTTATGGAGGCTTCATTATGTAGGCACGAACTTGAACAACTGGCCATTGGTGATTAAGTTAACCTTCAGCCCTTCTCTCCTCCCTGGAGGTTGGGGAGGTGGGGCTGAATGTCCCAACCGTCTAACCCTACTTTGTTTTTTCTGATGAGCAGCTCCCATCCTCAAGCTATCTAGGGGCTGCCTGCAGTTAGTCAACTCTGTAAGTGCCTGCAGATAGCATACAAAAAGACATCACTTTGGAGATTCTAAGGGTTTTAGGAGTTGTATGCCATGAAATGGGGTCAAAGAGCAAACATATATTTTTATAATATCACAAGACTAATCTAAGTAACAAAAAGAAATAAAATATTGACTTACAAAATAATTATGCTCAGTAAGAAGCCAGTCAAAATTCAGTATATATTGATTGATTTCACTTATATAAAAGTCTACAAAATACAGACTAATAAATAGTGGAC	20	PASS	ClusterIDs=HG3_PB_HySA_12322:HG3_PB_pbsv_7875:HG2_PB_pbsv_8102:HG4_PB_pbsv_8117:HG2_PB_assemblyticsfalcon_24742:HG2_PB_HySA_14825:HG3_PB_SVrefine2Falcon1Dovetail_4891:HG2_PB_PB10Xdip_27558:HG2_PB_SVrefine2Falcon1plusDovetail_11017:HG4_Ill_GATKHCSBGrefine_5665:HG3_Ill_GATKHCSBGrefine_5486:HG2_PB_PB10Xdip_27557:HG2_10X_SVrefine210Xhap12_5776:HG2_PB_SVrefine2PBcRplusDovetail_10212:HG2_PB_SVrefine2PB10Xhap12_5893:HG2_Ill_SVrefine2DISCOVARplusDovetail_12019:HG4_PB_HySA_11942:HG3_Ill_SVrefine2DISCOVARDovetail_6120;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5776:HG2_PB_PB10Xdip_27557:HG3_Ill_GATKHCSBGrefine_5486:HG4_Ill_GATKHCSBGrefine_5665;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0550678;ClusterMaxSizeDiff=0.0526736;ClusterMaxEditDist=0.199922;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=1228;DistBack=27772;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=7:46283007-46283010;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4999.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:76:1/1:0:6:0:8:./.:0:0:0:0:1/1:0:30:0/1:20:169:.:1137:.
chr7	47402295	HG4_Ill_SVrefine2DISCOVARDovetail_5906	A	ACATCATCAACATCACCATCAGTAACACCACCATAAACATCATCACTATCATCACAGTCATCACCGTCATCATCACTATCACCAAAGCATCATCACCATCATCACAGTCATAACCATCATCACTGTCATCATCACCATCACCATTACCACCATCAACATCATCACAGTCATCACCATCACCATCACCACCATCAACATCACCATTACCACCATTAACATCATCACCACCATCAACATCACCACCATCATCAGAGTCATTTACCATCACCATCACCAACATCATCACAGTCATCACCATCATCAGGGTCATCACCATCACCATCATCATCATCATCACCATTACCACTATCAAGATCATTACCACCATCAACATCATCACCATCATCACAGTCATCACCATCATCAGGGTCATCACCATCACCATCATCATCACCATTACCACTATCAAGATCATTACCACCATCAACATCATCACCATCATCACAGTCATCACCATCATCAGGGT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12025:HG2_Ill_SVrefine2DISCOVARplusDovetail_12026:HG4_PB_pbsv_8121:HG2_PB_HySA_14840:HG2_PB_pbsv_8106:HG2_PB_PB10Xdip_27560:HG3_Ill_MetaSV_4850:HG2_Ill_MetaSV_4679:HG2_PB_PB10Xdip_27559:HG2_PB_HySA_14838:HG3_PB_pbsv_7881:HG4_PB_SVrefine2Falcon1Dovetail_4940:HG2_PB_SVrefine2Falcon1plusDovetail_11020:HG3_PB_SVrefine2Falcon1Dovetail_4895:HG4_PB_SVrefine2PBcRDovetail_4002:HG4_Ill_SVrefine2DISCOVARDovetail_5906:HG3_Ill_SVrefine2DISCOVARDovetail_6123:HG2_PB_SVrefine2PBcRplusDovetail_10216:HG2_PB_SVrefine2PB10Xhap12_5897;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12025:HG4_PB_SVrefine2PBcRDovetail_4002:HG4_Ill_SVrefine2DISCOVARDovetail_5906:HG3_Ill_SVrefine2DISCOVARDovetail_6123:HG2_PB_SVrefine2PBcRplusDovetail_10216:HG2_PB_SVrefine2PB10Xhap12_5897;NumExactMatchSVs=6;ClusterMaxShiftDist=0.252289;ClusterMaxSizeDiff=0.246185;ClusterMaxEditDist=0.30916;PBcalls=13;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=504;DistBack=1467;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=361;REFWIDENED=7:47402296-47402656;PctSeqSimilarity=0.9435;PctSizeSimilarity=0.9582;PctRecOverlap=0.3472;SizeDiff=-22;StartDistance=-333;EndDistance=-333;GTMatch=0;TruScore=74;MatchId=5000.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:0:11:0:15:./.:0:0:0:0:1/1:0:28:1/1:2:84:.:.:.
chr7	47551076	HG2_Ill_MetaSV_4680	A	ACTTAAATATTTTATTTTATTTTTTTTTTGTTTGTTTGTTTTTTGTTTTTTTTTTTTTGTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	20	PASS	ClusterIDs=HG4_PB_HySA_11957:HG4_PB_pbsv_8122:HG3_PB_SVrefine2Falcon1Dovetail_4896:HG2_PB_assemblyticsfalcon_24753:HG2_Ill_breakscan11_3828:HG2_PB_pbsv_8107:HG4_PB_SVrefine2Falcon1Dovetail_4941:HG4_Ill_MetaSV_4891:HG4_Ill_GATKHCSBGrefine_5669:HG2_Ill_MetaSV_4680:HG4_PB_SVrefine2PBcRDovetail_4003:HG2_PB_SVrefine2Falcon1plusDovetail_11021:HG2_PB_HySA_14845:HG2_PB_SVrefine2PB10Xhap12_5899;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_4680:HG4_Ill_GATKHCSBGrefine_5669;NumExactMatchSVs=2;ClusterMaxShiftDist=0.270799;ClusterMaxSizeDiff=0.270799;ClusterMaxEditDist=0.306425;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=337;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=7:47551077-47551089;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5001.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:37:./.:29:7:8:23:./.:0:0:0:0:0/1:25:10:0/1:6:27:.:.:.
chr7	47692044	HG2_Ill_GATKHCSBGrefine_5573	T	TCTTGGCTCACTGCAAGCTCCGTCTCCCGGGTTCATGCCATTCTCCCAAGTAGCTGGGACTACAGACACCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTAGCCAGGATGGCCTCAATCTCCTGACCTTGTGATCCACCAGCCTAGGCCTCCCAAAGTGTTGGGATTACATGCGTGAGCCACCGCGCCCGGCCCTAACTTTTTTTTCTAAATGCAATACTGATTCTTCTTTTTCCTTCTCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTTCTTTTTTTGATGGAGTCTCACTCTGTCACCCAGGCCGGAGTGCAGTGGTGGGATCTCAGCTCACTGCAACCTGCGCCTCCCAAGCTCAAGTGATTCTTGAGCCTGGGTAATTTTTGTACTTTTTTTTTTTTTTAATGAGACAGAGTCTTGCTGAGTTGCCCAGGCTGGTGCGTAGTGGTGCAATCTCGGCTCATCAACCTCTGCCTCCCAGGTTCAAGCAATTCGCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCTGCCACCATGCCCAGCTAATTTTTTTCTATTTTTAGTACAGACAGTGTTTCACCATTTTGGCCAGCCTGGTCTTGAACTCCTGACCTTGTGATCCACCCACCTTGGACTTCCAAAGTG	20	PASS	ClusterIDs=HG4_PB_HySA_11959:HG3_PB_pbsv_7884:HG2_PB_assemblyticsfalcon_24755:HG4_PB_pbsv_8123:HG2_PB_assemblyticsPBcR_23983:HG2_PB_pbsv_8109:HG4_PB_SVrefine2Falcon1Dovetail_4942:HG2_PB_SVrefine2Falcon1plusDovetail_11022:HG3_PB_SVrefine2Falcon1Dovetail_4897:HG2_PB_SVrefine2PBcRplusDovetail_10218:HG4_Ill_SVrefine2DISCOVARDovetail_5908:HG4_Ill_MetaSV_4892:HG4_Ill_GATKHCSBGrefine_5670:HG3_Ill_SVrefine2DISCOVARDovetail_6127:HG3_Ill_MetaSV_4851:HG3_Ill_GATKHCSBGrefine_5494:HG2_PB_SVrefine2PB10Xhap12_5900:HG2_Ill_SVrefine2DISCOVARplusDovetail_12027:HG2_Ill_MetaSV_4681:HG2_Ill_GATKHCSBGrefine_5573:HG2_10X_SVrefine210Xhap12_5782:HG4_PB_SVrefine2PBcRDovetail_4004:HG2_PB_HySA_14849:HG2_PB_PB10Xdip_27567:HG2_PB_PB10Xdip_27566;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5782:HG2_Ill_GATKHCSBGrefine_5573:HG2_Ill_MetaSV_4681:HG2_Ill_SVrefine2DISCOVARplusDovetail_12027:HG2_PB_SVrefine2PB10Xhap12_5900:HG3_Ill_GATKHCSBGrefine_5494:HG3_Ill_MetaSV_4851:HG3_Ill_SVrefine2DISCOVARDovetail_6127:HG4_Ill_GATKHCSBGrefine_5670:HG4_Ill_MetaSV_4892:HG4_Ill_SVrefine2DISCOVARDovetail_5908;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0699001;ClusterMaxSizeDiff=0.0699001;ClusterMaxEditDist=0.214234;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=678;DistBack=80898;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=7:47692045-47692046;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5002.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:./.:0:1:0:36:./.:0:0:0:0:1/1:0:18:./.:5:96:.:.:.
chr7	48521178	HG3_Ill_GATKHCSBGrefine_5497	A	ATAATGAAAGAAAGACCTTATTTTAGAGTCCTCTCTATTATGTAGCATTCAATATGGGAACCTGGGTACAACTAGCATCTTGAAATTCCTCTTGGGCAATTTTTGGGAAACGTTTTGTGTTGTGTTGAATTTCCTTGAGACTAAGGGGGTGAATCCAGATGAGGAAGATCAGCAGTGAGTGCTTCCCATTGCTTTGAATCTTAATAATATCTGCCCACTGTAATTTTCCCATATCCCCCAAATGTATTATATTGCTTCATGTATGAAGGCATCCCATAGGCTGACTGTATTGCCTGGGACTCCCTACTGCCCTCTACCTGCCCCACTGGGGTTTGCCTGCCTCTCTTCTGCTGCCCCACCTCTTAATGTCTTTCAACATATACTAGAATCTCTGGTTTTCTGTTCTAACTCTGATGGTTAGCTTTTTTTTTTTTAATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3829:HG2_PB_SVrefine2PB10Xhap12_5906:HG2_PB_PB10Xdip_27586:HG2_PB_pbsv_8114:HG4_PB_pbsv_8129:HG3_PB_pbsv_7889:HG2_PB_assemblyticsfalcon_24766:HG4_PB_HySA_11964:HG4_PB_SVrefine2Falcon1Dovetail_4946:HG3_PB_SVrefine2Falcon1Dovetail_4900:HG4_Ill_GATKHCSBGrefine_5674:HG3_Ill_SVrefine2DISCOVARDovetail_6132:HG3_Ill_MetaSV_4852:HG3_Ill_GATKHCSBGrefine_5497:HG2_Ill_MetaSV_4683:HG2_Ill_GATKHCSBGrefine_5577:HG2_10X_SVrefine210Xhap12_5787:HG2_PB_SVrefine2Falcon1plusDovetail_11026:HG4_PB_SVrefine2PBcRDovetail_4008;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5787:HG2_Ill_GATKHCSBGrefine_5577:HG2_Ill_MetaSV_4683:HG3_Ill_GATKHCSBGrefine_5497:HG3_Ill_MetaSV_4852:HG3_Ill_SVrefine2DISCOVARDovetail_6132:HG4_Ill_GATKHCSBGrefine_5674;NumExactMatchSVs=7;ClusterMaxShiftDist=0.182397;ClusterMaxSizeDiff=0.182397;ClusterMaxEditDist=0.209968;PBcalls=11;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=489;DistBack=17788;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:48521179-48521179;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5004.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:43:0|1:36:1:0:41:./.:0:0:0:0:0/1:24:18:0/1:9:35:.:.:.
chr7	48758288	HG4_Ill_SVrefine2DISCOVARDovetail_5913	T	TCTATATAGTAAGTATATAGTAAGTATATACTTACTATATAGTAAGTATATACTTACTATAAAGTAAGTATATAGTAAGTATATACTTACTATAAAGTAAGTATATAGTAAGTATATACTTACTATATAGTAAGTATATACTTACTATATAGTAAGTATATAGTAAGTATATACTTACTATATAGTAAGTATATACTTACTATATAGTAAGTATATAGTAAGTATATACTTACTATATAGTAAGTATATACTTACTATATAGTAAGTATATACTTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5907:HG3_PB_pbsv_7890:HG2_PB_pbsv_8115:HG4_PB_assemblyticsfalcon_24210:HG2_PB_SVrefine2Falcon1plusDovetail_11027:HG4_PB_pbsv_8130:HG3_PB_HySA_12353:HG3_Ill_SVrefine2DISCOVARDovetail_6134:HG2_Ill_SVrefine2DISCOVARplusDovetail_12031:HG3_PB_SVrefine2Falcon1Dovetail_4901:HG4_PB_SVrefine2Falcon1Dovetail_4947:HG2_PB_SVrefine2PBcRplusDovetail_10223:HG4_PB_SVrefine2PBcRDovetail_4009:HG4_Ill_SVrefine2DISCOVARDovetail_5913:HG2_PB_PB10Xdip_27589:HG2_PB_PB10Xdip_27588;NumClusterSVs=16;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_5913:HG4_PB_SVrefine2PBcRDovetail_4009;NumExactMatchSVs=2;ClusterMaxShiftDist=0.314516;ClusterMaxSizeDiff=0.306452;ClusterMaxEditDist=0.330645;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=275;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=50;REFWIDENED=7:48758290-48758339;PctSeqSimilarity=0.9585;PctSizeSimilarity=0.92;PctRecOverlap=0.92;SizeDiff=22;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=93;MatchId=5005.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:79:1/1:4:50:3:19:./.:0:0:0:0:0/1:5:25:./.:.:.:.:.:.
chr7	50014428	HG4_Ill_150bpfermikitraw_10733	T	TAGCATCAGATCTGGTGCTTGCATCCCCCGCACTGAGGGACTTGAGTGCAGGTTTGCCCAGCCCAGGCGACAGGCCAAGCTGGGCAGGACTGAGCTGGGCAAACCTGCACTCAAGTCCCCCAGTGTGGGGCATGCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_28032:HG2_PB_assemblyticsfalcon_24775:HG2_PB_SVrefine2Falcon1plusDovetail_11031:HG2_PB_pbsv_8120:HG4_PB_SVrefine2PBcRDovetail_4013:HG4_PB_pbsv_8138:HG4_Ill_manta_2001:HG2_PB_assemblyticsPBcR_23999:HG4_Ill_SVrefine2DISCOVARDovetail_5921:HG4_Ill_MetaSV_4900:HG4_Ill_GATKHCSBGrefine_5680:HG4_Ill_250bpfermikitraw_11177:HG4_Ill_150bpfermikitraw_10733:HG3_Ill_manta_1905:HG2_PB_SVrefine2PBcRplusDovetail_10226:HG2_PB_SVrefine2PB10Xhap12_5910:HG2_10X_SVrefine210Xhap12_5794:HG4_PB_SVrefine2Falcon1Dovetail_4951:HG3_PB_SVrefine2Falcon1Dovetail_4905:HG3_Ill_Spiral_8755:HG3_Ill_SVrefine2DISCOVARDovetail_6146:HG3_Ill_MetaSV_4856:HG3_Ill_GATKHCSBGrefine_5502:HG2_Ill_manta_2330:HG2_Ill_SVrefine2DISCOVARplusDovetail_12035:HG2_Ill_MetaSV_4687:HG2_Ill_GATKHCSBGrefine_5582:HG2_PB_HySA_14869:HG3_PB_pbsv_7896:HG2_PB_PB10Xdip_28033;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5794:HG2_PB_SVrefine2PB10Xhap12_5910:HG2_PB_SVrefine2PBcRplusDovetail_10226:HG3_Ill_manta_1905:HG4_Ill_150bpfermikitraw_10733:HG4_Ill_250bpfermikitraw_11177:HG4_Ill_GATKHCSBGrefine_5680:HG4_Ill_MetaSV_4900:HG4_Ill_SVrefine2DISCOVARDovetail_5921:HG4_Ill_manta_2001:HG4_PB_SVrefine2PBcRDovetail_4013;NumExactMatchSVs=11;ClusterMaxShiftDist=0.219697;ClusterMaxSizeDiff=0.219697;ClusterMaxEditDist=0.318182;PBcalls=14;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=135;DistBack=4336;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=7:50014429-50014441;PctSeqSimilarity=0.9963;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5007.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:2:21:1:39:./.:0:0:0:0:0/1:4:36:./.:.:.:.:.:.
chr7	52226509	HG2_PB_SVrefine2Falcon1plusDovetail_11034	T	TATATATTTATATGTGTATATAAATAAATATATTTATATGTGTATATAAATAAATATATTTATATGTGTATATAAATAAATATATTTATATGTGTATATAAATAAATATATTTATATGTGTATATAAATAAATATATTTATATGTGTATATAAATAAATATATTTATATGTGTATATAAATAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4019:HG2_PB_pbsv_8126:HG3_PB_pbsv_7904:HG2_PB_SVrefine2PBcRplusDovetail_10231:HG4_Ill_SVrefine2DISCOVARDovetail_5931:HG4_PB_pbsv_8147:HG4_PB_SVrefine2Falcon1Dovetail_4957:HG2_PB_SVrefine2PB10Xhap12_5917:HG2_PB_SVrefine2Falcon1plusDovetail_11034:HG2_PB_PB10Xdip_28045:HG2_PB_PB10Xdip_28044;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11034:HG2_PB_SVrefine2PB10Xhap12_5917:HG2_PB_SVrefine2PBcRplusDovetail_10231;NumExactMatchSVs=3;ClusterMaxShiftDist=0.234694;ClusterMaxSizeDiff=0.22449;ClusterMaxEditDist=0.265306;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=182;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=420;REFWIDENED=7:52226510-52226929;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5008.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:./.:6:53:0:3:./.:0:0:0:0:0/1:3:12:./.:.:.:.:.:.
chr7	52771463	HG2_Ill_GATKHCSBGrefine_5587	T	TAAAATAAAGTATTTTCATTGTTTATTTATCTAAAAGATAATTCTTTTGTTAAACTAATAGCAGTAACAATGCATTGGTGATGTCATCATATAGGTAAGTGAAATGAGGGACATCGACATAAGAAAAGGGAGAAAGGAATTGGGAATACTCTGTTATAAAGTGCATGCAAACAAACAAAGCAGTGTATCATTAATTGAAGGTGGAATTTGTTTTAAAAGTTTATTGTAAGCTTTGAAGAAGCCATTCAACCTGTTCCTAAAGAAGTAAAATCAGTATGCTAAGTGAAGAGACAAAATGAAATTATAGAAAATGCTAACTTAAAATGAAAGAAAAGAGA	20	PASS	ClusterIDs=HG2_PB_pbsv_8130:HG4_PB_assemblyticsfalcon_24250:HG3_PB_SVrefine2PBcRDovetail_3732:HG3_PB_pbsv_7908:HG3_Ill_SVrefine2DISCOVARDovetail_6155:HG3_Ill_MetaSV_4861:HG3_Ill_GATKHCSBGrefine_5509:HG2_Ill_MetaSV_4692:HG2_Ill_GATKHCSBGrefine_5587:HG2_10X_SVrefine210Xhap12_5804:HG4_PB_SVrefine2Falcon1Dovetail_4958:HG2_Ill_breakscan11_3830;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5804:HG2_Ill_GATKHCSBGrefine_5587:HG2_Ill_MetaSV_4692:HG3_Ill_GATKHCSBGrefine_5509:HG3_Ill_MetaSV_4861:HG3_Ill_SVrefine2DISCOVARDovetail_6155:HG3_PB_SVrefine2PBcRDovetail_3732;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0881057;ClusterMaxSizeDiff=0.0881057;ClusterMaxEditDist=0.231098;PBcalls=5;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=337;DistBack=6265;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=7:52771464-52771472;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5009.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:37:0|1:35:2:1:36:./.:0:0:0:0:0/1:30:13:0/1:9:23:.:.:.
chr7	52789459	HG4_PB_SVrefine2Falcon1Dovetail_4960	C	TTGGAAACCAACAGTAAACTAAAAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACTTGGACACAGGAAGGGGAATATACACTCTGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAAAAAAAAAAAACAATATTAGGTCTTCCAATCTAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4862:HG3_PB_HySA_12386:HG2_PB_pbsv_8132:HG3_PB_pbsv_7911:HG4_PB_assemblyticsfalcon_24253:HG4_PB_SVrefine2Falcon1Dovetail_4960:HG3_Ill_GATKHCSBGrefine_5510:HG3_PB_SVrefine2PBcRDovetail_3734:HG2_PB_HySA_14902:HG2_PB_SVrefine2Falcon1plusDovetail_11039:HG3_PB_assemblyticsfalcon_24660:HG2_PB_assemblyticsfalcon_24806:HG3_PB_SVrefine2Falcon1Dovetail_4915;NumClusterSVs=13;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_4960:HG4_PB_assemblyticsfalcon_24253;NumExactMatchSVs=2;ClusterMaxShiftDist=0.197183;ClusterMaxSizeDiff=0.197183;ClusterMaxEditDist=0.253521;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=2317;DistForward=7191;DistMin=2317;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:52789460-52789458;PctSeqSimilarity=0.9424;PctSizeSimilarity=0.8959;PctRecOverlap=0.8959;SizeDiff=-38;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=91;MatchId=5010.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:19:0|1:38:0:1:25:./.:0:0:0:0:0/1:38:9:0/1:15:6:.:.:.
chr7	52809384	HG2_PB_SVrefine2Falcon1plusDovetail_11041	T	TAAAAGCTTTTAATTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCATTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3831:HG3_PB_pbsv_7913:HG2_PB_pbsv_8134:HG3_Ill_MetaSV_4866:HG3_Ill_GATKHCSBGrefine_5512:HG2_PB_SVrefine2Falcon1plusDovetail_11041:HG2_Ill_GATKHCSBGrefine_5591:HG3_PB_HySA_12387;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5591:HG2_PB_SVrefine2Falcon1plusDovetail_11041:HG3_Ill_GATKHCSBGrefine_5512:HG3_Ill_MetaSV_4866;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0832;ClusterMaxSizeDiff=0.0736;ClusterMaxEditDist=0.18612;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=309;DistBack=6250;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=7:52809385-52809400;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5011.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:31:0|1:39:0:0:37:./.:0:0:0:0:0/1:36:13:0/1:6:35:.:.:.
chr7	52819130	HG2_PB_HySA_14903	T	TTCCTAAATTAATTCTATTGTGATTAGATATCATATTTTTATGATTTCAATCTTAAATGACTTGCTTCATATTCAAATATTTGGGAGATTCTGTATGTTTCTTTTGTTGTTTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11042:HG2_PB_pbsv_8135:HG2_PB_HySA_14903:HG3_PB_pbsv_7914;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_14903;NumExactMatchSVs=1;ClusterMaxShiftDist=0.118644;ClusterMaxSizeDiff=0.0847458;ClusterMaxEditDist=0.279835;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=112;DistBack=-54;DistForward=90422;DistMin=-54;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=234;REFWIDENED=7:52819070-52819303;PctSeqSimilarity=0.9904;PctSizeSimilarity=0.9739;PctRecOverlap=0.6348;SizeDiff=-3;StartDistance=41;EndDistance=41;GTMatch=0;TruScore=86;MatchId=5012.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:0|1:31:4:4:26:./.:0:0:0:0:0/1:17:17:./.:.:.:.:.:.
chr7	54817063	HG4_Ill_250bpfermikitraw_11218	C	CTACAGGTACTTAACAAACAGAAAATGTTTAAGAAATTCCTTCAGGTGATTCATGCATGGTGAAGTTTAATACTGTTTCACAGTATTAGCTCTGG	20	PASS	ClusterIDs=HG2_PB_pbsv_8142:HG2_PB_PB10Xdip_28070:HG4_PB_pbsv_8162:HG2_PB_SVrefine2Falcon1plusDovetail_11047:HG4_PB_HySA_12009:HG2_PB_HySA_14918:HG4_PB_SVrefine2PBcRDovetail_4025:HG4_Ill_SVrefine2DISCOVARDovetail_5944:HG4_Ill_Krunchall_11850:HG4_Ill_GATKHCSBGrefine_5691:HG4_Ill_250bpfermikitraw_11218:HG4_Ill_150bpfermikitraw_10771:HG2_PB_SVrefine2PBcRplusDovetail_10242:HG2_PB_SVrefine2PB10Xhap12_5927:HG2_Ill_Krunchall_11522:HG2_Ill_GATKHCSBGrefine_5599:HG2_10X_SVrefine210Xhap12_5816;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5816:HG2_Ill_GATKHCSBGrefine_5599:HG2_Ill_Krunchall_11522:HG2_PB_SVrefine2PB10Xhap12_5927:HG2_PB_SVrefine2PBcRplusDovetail_10242:HG4_Ill_150bpfermikitraw_10771:HG4_Ill_250bpfermikitraw_11218:HG4_Ill_GATKHCSBGrefine_5691:HG4_Ill_Krunchall_11850:HG4_Ill_SVrefine2DISCOVARDovetail_5944:HG4_PB_SVrefine2PBcRDovetail_4025;NumExactMatchSVs=11;ClusterMaxShiftDist=0.042328;ClusterMaxSizeDiff=0.0314136;ClusterMaxEditDist=0.291667;PBcalls=9;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=94;DistBack=27046;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=93;REFWIDENED=7:54817064-54817156;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5014.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:34:1|0:2:31:22:1:./.:0:0:0:0:0/1:23:24:./.:.:.:.:.:.
chr7	55369226	HG3_PB_pbsv_7931	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCATCTCGGCTCACTGCAAGCTTCCGCCTCCCGGCGTTCACGCCGATTCTCCTGCCCTCAGCCTACCCAAGATAGCTGGGACTAAAACAGGCCGCCCGCCACTTACCCGCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGTTTCACCGTTTTAGCCCGGGATGCGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAAGTGCTGGATTACCAGGGTGAGCCACGCGGCCCGGCACCAAGAAAAAC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_28081:HG2_PB_pbsv_8148:HG3_PB_pbsv_7931:HG4_PB_SVrefine2Falcon1Dovetail_4972:HG2_PB_HySA_14928:HG2_PB_SVrefine2PB10Xhap12_5931:HG2_PB_SVrefine2PBcRplusDovetail_10246;NumClusterSVs=7;ExactMatchIDs=HG3_PB_pbsv_7931;NumExactMatchSVs=1;ClusterMaxShiftDist=0.128728;ClusterMaxSizeDiff=0.128728;ClusterMaxEditDist=0.193741;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=338;DistBack=0;DistForward=3855;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=7:55369220-55369232;PctSeqSimilarity=0.9513;PctSizeSimilarity=0.9527;PctRecOverlap=0.9528;SizeDiff=16;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=95;MatchId=5015.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:21:./.:8:13:9:5:./.:0:0:0:0:0/1:33:9:0/1:6:12:.:.:.
chr7	56183104	HG2_Ill_150bpfermikitraw_10571	A	ATACATATGTATATATATACATATATATGTATATATATATATATGTGTATATATATATATATATG	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10571:HG4_Ill_manta_2010:HG3_Ill_150bpfermikitraw_10634:HG2_Ill_manta_2341;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10571:HG2_Ill_manta_2341;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.0769231;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=64;DistBack=49328;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=7:56183103-56183107;PctSeqSimilarity=0.8843;PctSizeSimilarity=0.625;PctRecOverlap=0.6308;SizeDiff=24;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=71;MatchId=5016.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:./.:20:1:8:21:./.:0:0:0:0:0/1:13:11:./.:.:.:.:.:.
chr7	56219376	HG2_PB_PB10Xdip_28085	GGG	GGGTCAGCCCCCCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCTGCCTGCCCGGGAGGTGAGGGGCGCCTCTGCCCGGCTGCCCGTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCGCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGTCAGCCCCCCGCCCGGCCAGCCACCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCTTCCGGGAGGGAGGTTGGGGGGTCAGCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3738:HG3_PB_SVrefine2Falcon1Dovetail_4928:HG3_PB_pbsv_7933:HG2_PB_PB10Xdip_28085:HG2_PB_pbsv_8153:HG2_PB_SVrefine2PB10Xhap12_5936:HG2_PB_SVrefine2Falcon1plusDovetail_11054;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_28085;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0322061;ClusterMaxSizeDiff=0.0306699;ClusterMaxEditDist=0.168269;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=610;DistBack=260;DistForward=90;DistMin=90;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1001;REFWIDENED=7:56218719-56219719;PctSeqSimilarity=0.9904;PctSizeSimilarity=0.9807;PctRecOverlap=0.9839;SizeDiff=-12;StartDistance=3;EndDistance=5;GTMatch=0;TruScore=98;MatchId=5017.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:19:1|0:2:17:16:0:./.:0:0:0:0:0/1:4:16:0/1:7:15:.:.:.
chr7	63953012	HG2_Ill_svaba_10433	T	TCCAGCTTGACATTTCCCTTCAACTAAATGAGTTTGGGGTCCCAAAATTTAATTTCCTTTCACATTCTGTATAAAATAAGTAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3836:HG3_PB_pbsv_7980:HG2_PB_pbsv_8195:HG4_PB_pbsv_8217:HG4_PB_assemblyticsfalcon_24330:HG4_PB_SVrefine2PBcRDovetail_4073:HG3_Ill_manta_1921:HG2_PB_SVrefine2Falcon1plusDovetail_11083:HG2_Ill_manta_2349:HG2_Ill_SpiralSDKrefine_15891:HG2_Ill_Krunchall_11577:HG2_Ill_GATKHC_13461:HG2_Ill_GATKHCSBGrefine_5633:HG2_Ill_250bpfermikitraw_11267:HG2_Ill_150bpfermikitraw_10601:HG2_10X_SVrefine210Xhap12_5846:HG4_PB_SVrefine2Falcon1Dovetail_4995:HG4_Ill_svaba_10549:HG4_Ill_manta_2016:HG4_Ill_SVrefine2DISCOVARDovetail_5970:HG4_Ill_Krunchall_11897:HG4_Ill_GATKHC_13518:HG4_Ill_GATKHCSBGrefine_5728:HG4_Ill_250bpfermikitraw_11267:HG4_Ill_150bpfermikitraw_10809:HG3_PB_assemblyticsfalcon_24735:HG3_Ill_svaba_10530:HG3_Ill_Spiral_8835:HG3_Ill_SVrefine2DISCOVARDovetail_6184:HG3_Ill_Krunchall_11294:HG3_Ill_GATKHC_13423:HG3_Ill_GATKHCSBGrefine_5549:HG3_Ill_250bpfermikitraw_10964:HG3_Ill_150bpfermikitraw_10673:HG2_Ill_svaba_10433:HG3_PB_SVrefine2PBcRDovetail_3762:HG4_PB_HySA_12085;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_svaba_10433:HG3_Ill_150bpfermikitraw_10673:HG3_Ill_250bpfermikitraw_10964:HG3_Ill_GATKHCSBGrefine_5549:HG3_Ill_GATKHC_13423:HG3_Ill_Krunchall_11294:HG3_Ill_SVrefine2DISCOVARDovetail_6184:HG3_Ill_Spiral_8835:HG3_Ill_svaba_10530:HG3_PB_assemblyticsfalcon_24735:HG4_Ill_150bpfermikitraw_10809:HG4_Ill_250bpfermikitraw_11267:HG4_Ill_GATKHCSBGrefine_5728:HG4_Ill_GATKHC_13518:HG4_Ill_Krunchall_11897:HG4_Ill_SVrefine2DISCOVARDovetail_5970:HG4_Ill_manta_2016:HG4_Ill_svaba_10549:HG4_PB_SVrefine2Falcon1Dovetail_4995;NumExactMatchSVs=19;ClusterMaxShiftDist=0.126437;ClusterMaxSizeDiff=0.114943;ClusterMaxEditDist=0.223464;PBcalls=10;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=84;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=7:63953013-63953015;PctSeqSimilarity=0.9941;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5018.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:0|1:21:3:0:24:./.:0:0:0:0:0/1:29:31:./.:.:.:.:.:.
chr7	64289937	HG3_Ill_GATKHCSBGrefine_5552	T	TTTGACCTCTTCTGCCCTTGTCTTGTTAATATTCGCATGGAATGTCTACTTCCATCTTGCCATTTTTATTCTTTTGTTATCATGACACTGCAACTGACTTGTAAAAAGTCAAGTTGGATCTTGGTTTTTAAATGTTTTATATGAATTTATTGATGGAAAGTATGTCTATTGAGGCCAGGCATGGTAGCTCACACATGTAATCCCCACACTTTGGTGGTGGGTGGATCACCTGAGGTCAGAAGTTTGAGACCAGCCTGGCCAATATGGTGAAAACCCATCTCTACTAAAAATACAAAAAGTAGCTGGGCATAGTGGTGGGTACCTGTAATCCCAGCTACTCGGGAGGCTAAAACAAGAGAATTGCTTGAACCAGGAGGTTGAGGTTACAGTGGGTTGAAATCGTGCCATTGCACTCTAGCCTGGGTGACAAAAGTAAAACTCCATCTCAAAAAAAAAAAAAAAAAGCATATCTGTTGATCCAAAAGTTAATTTTATATATATTTAAGTAATTTTCTGAGAAAGACTTACTAATGTTATTTCATTGTTTATTACATCTTTCTCATTTTCTTTTTTCTGTCTTCCTTTGTGTCTTTTTTATTTTTTTTACCGATATGCTTTCATTTCTGTCTTATTTTCTTTTGTGTATCTATACAGGTATTTTTCTTCTTGTACCTTGGAGATTACATAAAACTTCTAAAAGATACAAC	20	PASS	ClusterIDs=HG3_PB_pbsv_7985:HG4_PB_assemblyticsfalcon_24333:HG4_PB_SVrefine2Falcon1Dovetail_4997:HG4_Ill_MetaSV_4936:HG2_PB_SVrefine2Falcon1plusDovetail_11085:HG2_PB_SVrefine2Falcon2Bionano_3971:HG4_PB_SVrefine2PBcRDovetail_4076:HG3_Ill_MetaSV_4893:HG3_Ill_GATKHCSBGrefine_5552:HG2_PB_SVrefine2PBcRplusDovetail_10286:HG2_Ill_SVrefine2DISCOVARplusDovetail_12091:HG2_Ill_GATKHCSBGrefine_5634:HG2_10X_SVrefine210Xhap12_5850:HG2_PB_PB10Xdip_28629:HG2_PB_PB10Xdip_28628:HG4_PB_HySA_12088:HG3_PB_SVrefine2Falcon1Dovetail_4962:HG4_Ill_SVrefine2DISCOVARDovetail_5974:HG3_PB_SVrefine2PBcRDovetail_3765:HG3_Ill_SVrefine2DISCOVARDovetail_6187:HG2_PB_SVrefine2PBcRplusDovetail_10285:HG2_PB_SVrefine2PB10Xhap12_5980:HG2_Ill_SVrefine2DISCOVARplusDovetail_12090:HG4_PB_pbsv_8221:HG2_PB_pbsv_8198;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5850:HG2_Ill_GATKHCSBGrefine_5634:HG2_Ill_SVrefine2DISCOVARplusDovetail_12091:HG2_PB_SVrefine2PBcRplusDovetail_10286:HG3_Ill_GATKHCSBGrefine_5552:HG3_Ill_MetaSV_4893:HG4_PB_SVrefine2PBcRDovetail_4076;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0656883;ClusterMaxSizeDiff=0.0600978;ClusterMaxEditDist=0.191518;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=706;DistBack=-1;DistForward=25869;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=7:64289938-64289937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5019.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:16:0:15:./.:0:0:0:0:1/1:0:33:./.:8:101:1602:.:.
chr7	65597007	HG3_Ill_SVrefine2DISCOVARDovetail_6192	C	CAAAGTGCTGGGATTACACGCTTGAGCCACCATGCCCAGCCATTTTTCTCTTACATTACATAAACGTAAAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4971:HG4_PB_HySA_12122:HG3_PB_HySA_12513:HG4_PB_pbsv_8244:HG2_PB_HySA_15037:HG2_PB_pbsv_8217:HG4_PB_SVrefine2PBcRDovetail_4085:HG3_PB_pbsv_8003:HG4_Ill_manta_2021:HG4_Ill_SVrefine2DISCOVARDovetail_5979:HG4_Ill_Krunchall_11919:HG4_Ill_GATKHC_13553:HG4_Ill_GATKHCSBGrefine_5743:HG4_Ill_250bpfermikitraw_11290:HG4_Ill_150bpfermikitraw_10828:HG3_PB_SVrefine2PBcRDovetail_3774:HG3_Ill_manta_1924:HG3_Ill_Spiral_8846:HG3_Ill_SVrefine2DISCOVARDovetail_6192:HG3_Ill_Krunchall_11313:HG3_Ill_GATKHC_13459:HG3_Ill_GATKHCSBGrefine_5563:HG3_Ill_250bpfermikitraw_10981:HG3_Ill_150bpfermikitraw_10688:HG2_Ill_manta_2354:HG2_Ill_SpiralSDKrefine_15901:HG2_Ill_Krunchall_11598:HG2_Ill_GATKHC_13493:HG2_Ill_GATKHCSBGrefine_5649:HG2_Ill_250bpfermikitraw_11285:HG2_Ill_150bpfermikitraw_10620:HG2_10X_SVrefine210Xhap12_5857:HG4_PB_SVrefine2Falcon1Dovetail_5002;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5857:HG2_Ill_150bpfermikitraw_10620:HG2_Ill_250bpfermikitraw_11285:HG2_Ill_GATKHCSBGrefine_5649:HG2_Ill_GATKHC_13493:HG2_Ill_Krunchall_11598:HG2_Ill_SpiralSDKrefine_15901:HG2_Ill_manta_2354:HG3_Ill_150bpfermikitraw_10688:HG3_Ill_250bpfermikitraw_10981:HG3_Ill_GATKHCSBGrefine_5563:HG3_Ill_GATKHC_13459:HG3_Ill_Krunchall_11313:HG3_Ill_SVrefine2DISCOVARDovetail_6192:HG3_Ill_Spiral_8846:HG3_Ill_manta_1924:HG3_PB_SVrefine2PBcRDovetail_3774:HG4_Ill_150bpfermikitraw_10828:HG4_Ill_250bpfermikitraw_11290:HG4_Ill_GATKHCSBGrefine_5743:HG4_Ill_GATKHC_13553:HG4_Ill_Krunchall_11919:HG4_Ill_SVrefine2DISCOVARDovetail_5979:HG4_Ill_manta_2021:HG4_PB_SVrefine2PBcRDovetail_4085;NumExactMatchSVs=25;ClusterMaxShiftDist=0.122449;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.261438;PBcalls=10;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=70;DistBack=7929;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=7:65597008-65597062;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5020.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:24:0|1:21:2:1:21:./.:0:0:0:0:0/1:25:34:./.:.:.:.:.:.
chr7	66078304	HG3_PB_pbsv_8006	A	AAAGAAATAAGGAGGCCGGGCGCGGTGGGCCTCACGCCTGCTAATCCCAGCAACTTGGTGAGCCGAGGCGGGCGGATTCACGAGTCAGAATCGAGCACCATCCCGCGCTAAAAACGGGAAACCTCGTCTCTACTAAAAATACAAAAAATTATGCGGCGTAGTGCTGGCGCACCTGCTAGTCCAGCTACTTGGGGAGGCCTGAGGCCAGGAGAATGGCGCTGAACCCGGAGGCGGCAGCTTGCAGTAGGCAGATCCCGCCACTGCCCCACTTCCAGCGCTGGGCCCCGACAGAGGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3838:HG2_PB_pbsv_8219:HG3_PB_pbsv_8006:HG2_PB_HySA_15044;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_8006;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0514372;ClusterMaxSizeDiff=0.0514372;ClusterMaxEditDist=0.188623;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=338;DistBack=14456;DistForward=15418;DistMin=14456;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=7:66078305-66078316;PctSeqSimilarity=0.9356;PctSizeSimilarity=0.9645;PctRecOverlap=0.9646;SizeDiff=12;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=95;MatchId=5021.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:32:0|1:27:3:2:24:./.:0:0:0:0:0/1:34:4:0/1:14:20:.:.:.
chr7	67427920	HG2_Ill_150bpfermikitraw_10638	A	ATTTACTAACTTAATTTTATTTTGCTAATGATTTGTGGTCAGGAAATCAGGAAGAGCTCAGCTGAACATCTTGATATTTTTTCCATATTGCATCAGCTAGAATTGCCTAAG	20	PASS	ClusterIDs=HG4_PB_pbsv_8253:HG3_Ill_Spiral_8871:HG2_Ill_SpiralSDKrefine_15920:HG3_PB_pbsv_8018:HG4_PB_assemblyticsfalcon_24366:HG3_PB_assemblyticsfalcon_24778:HG2_PB_assemblyticsfalcon_24914:HG2_PB_PB10Xdip_28663:HG4_PB_SVrefine2PBcRDovetail_4092:HG4_PB_SVrefine2Falcon1Dovetail_5008:HG4_Ill_svaba_10593:HG4_Ill_manta_2024:HG4_Ill_SVrefine2DISCOVARDovetail_5990:HG4_Ill_MetaSV_4948:HG4_Ill_GATKHCSBGrefine_5756:HG4_Ill_250bpfermikitraw_11309:HG4_Ill_150bpfermikitraw_10845:HG3_PB_SVrefine2Falcon1Dovetail_4981:HG3_Ill_svaba_10575:HG3_Ill_SVrefine2DISCOVARDovetail_6209:HG3_Ill_MetaSV_4905:HG3_Ill_GATKHCSBGrefine_5575:HG3_Ill_250bpfermikitraw_11009:HG3_Ill_150bpfermikitraw_10717:HG2_PB_SVrefine2PBcRplusDovetail_10302:HG2_PB_SVrefine2PB10Xhap12_6000:HG2_PB_SVrefine2Falcon2Bionano_3977:HG2_PB_SVrefine2Falcon1plusDovetail_11096:HG2_Ill_svaba_10472:HG2_Ill_SVrefine2DISCOVARplusDovetail_12110:HG2_Ill_MetaSV_4729:HG2_Ill_GATKHCSBGrefine_5660:HG2_Ill_250bpfermikitraw_11306:HG2_Ill_150bpfermikitraw_10638:HG2_10X_SVrefine210Xhap12_5873:HG2_PB_pbsv_8224:HG2_PB_HySA_15062;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5873:HG2_Ill_150bpfermikitraw_10638:HG2_Ill_250bpfermikitraw_11306:HG2_Ill_GATKHCSBGrefine_5660:HG2_Ill_MetaSV_4729:HG2_Ill_SVrefine2DISCOVARplusDovetail_12110:HG2_Ill_svaba_10472:HG2_PB_SVrefine2Falcon1plusDovetail_11096:HG2_PB_SVrefine2Falcon2Bionano_3977:HG2_PB_SVrefine2PB10Xhap12_6000:HG2_PB_SVrefine2PBcRplusDovetail_10302:HG3_Ill_150bpfermikitraw_10717:HG3_Ill_250bpfermikitraw_11009:HG3_Ill_GATKHCSBGrefine_5575:HG3_Ill_MetaSV_4905:HG3_Ill_SVrefine2DISCOVARDovetail_6209:HG3_Ill_svaba_10575:HG3_PB_SVrefine2Falcon1Dovetail_4981:HG4_Ill_150bpfermikitraw_10845:HG4_Ill_250bpfermikitraw_11309:HG4_Ill_GATKHCSBGrefine_5756:HG4_Ill_MetaSV_4948:HG4_Ill_SVrefine2DISCOVARDovetail_5990:HG4_Ill_manta_2024:HG4_Ill_svaba_10593:HG4_PB_SVrefine2Falcon1Dovetail_5008:HG4_PB_SVrefine2PBcRDovetail_4092;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0792952;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.266667;PBcalls=15;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=110;DistBack=44661;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4310;REFWIDENED=7:67427921-67418168;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5022.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:1/1:1:26:0:25:./.:0:0:0:0:1/1:0:27:./.:.:.:.:.:.
chr7	67721494	HG4_Ill_Krunchall_11942	C	CCGATGTACATAGTGAACTATGTACATCGATGTACATAGTGAACTATGTACAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5875:HG4_PB_pbsv_8255:HG4_PB_HySA_12142:HG2_Ill_breakscan11_3839:HG2_PB_HySA_15067:HG4_Ill_svaba_10595:HG4_Ill_Krunchall_11942:HG4_Ill_GATKHCSBGrefine_5758:HG4_Ill_250bpfermikitraw_11314:HG4_Ill_150bpfermikitraw_10850:HG2_PB_SVrefine2Falcon2Bionano_3980:HG2_Ill_svaba_10476:HG2_Ill_SpiralSDKrefine_15922:HG2_Ill_SVrefine2DISCOVARplusDovetail_12114:HG2_Ill_Krunchall_11623:HG2_Ill_GATKHCSBGrefine_5662:HG2_Ill_250bpfermikitraw_11309:HG2_Ill_150bpfermikitraw_10643;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5875:HG4_Ill_svaba_10595:HG4_Ill_Krunchall_11942:HG4_Ill_GATKHCSBGrefine_5758:HG4_Ill_250bpfermikitraw_11314:HG4_Ill_150bpfermikitraw_10850:HG2_PB_SVrefine2Falcon2Bionano_3980:HG2_Ill_svaba_10476:HG2_Ill_SpiralSDKrefine_15922:HG2_Ill_SVrefine2DISCOVARplusDovetail_12114:HG2_Ill_Krunchall_11623:HG2_Ill_GATKHCSBGrefine_5662:HG2_Ill_250bpfermikitraw_11309:HG2_Ill_150bpfermikitraw_10643;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0576923;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.192308;PBcalls=4;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=52;DistBack=-1;DistForward=25;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=7:67721495-67721534;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5023.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:24:0|1:17:4:1:19:./.:0:0:0:0:0/1:21:32:./.:.:.:.:.:.
chr7	67927696	HG2_PB_SVrefine2Falcon2Bionano_3981	C	CCTTCCCCTCCCCTTCTCTCACCTCCTGTTCTTTCCCTCCCCTCCCCTTCCCTCCCCTCCCATTCCTTCACCTCCACTTCCTTTCCTCCCTCCCCTTCCTTCACCTCCTCTTCCTTTCCCTCCCCTTCCCTTTCCTCCCTTTCTCTCCCCTCTCCTTCCCTCCCCTCCCTTCCCTCTCCTCCCCTCCCATTCCCTCCCCTTCTGCTCTTCCCCTCCCCTTCCTTCTCCTCCCCTTCCTTTCCCTCCCCTTCCCTCCCCTCCTGTTCTTCCCCTCCCCTCCCCTTCCTTCCCCATCCCCTTCCCTCCTTTCCCCTCCCATCCTGTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3981:HG3_PB_assemblyticsfalcon_24783:HG3_PB_SVrefine2Falcon1Dovetail_4983:HG2_PB_pbsv_8230:HG3_PB_pbsv_8020:HG3_PB_HySA_12552:HG2_PB_HySA_15071:HG4_PB_HySA_12145:HG2_PB_PB10Xdip_28667:HG4_PB_pbsv_8257:HG4_PB_HySA_12144:HG4_PB_SVrefine2Falcon1Dovetail_5011:HG4_PB_SVrefine2PBcRDovetail_4095:HG2_PB_SVrefine2PBcRplusDovetail_10305:HG2_PB_SVrefine2PB10Xhap12_6002:HG2_PB_SVrefine2Falcon1plusDovetail_11098:HG3_Ill_SVrefine2DISCOVARDovetail_6213;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3981:HG3_Ill_SVrefine2DISCOVARDovetail_6213;NumExactMatchSVs=2;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.31746;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=22009;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10246;REFWIDENED=7:67937447-67927984;PctSeqSimilarity=0.9609;PctSizeSimilarity=0.9537;PctRecOverlap=0.5754;SizeDiff=15;StartDistance=-130;EndDistance=-130;GTMatch=0;TruScore=82;MatchId=5024.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:53:1/1:0:23:1:25:./.:0:0:0:0:./.:0:3:1/1:1:15:.:.:.
chr7	67950365	HG3_Ill_GATKHC_13507	A	AGAAGGAGGAAAGGAAGAAAGGGAAGAGGGAGGAAGGAGGAAAGGAAGAAACGAAAGAGGGAG	20	PASS	ClusterIDs=HG3_CG_vcfBeta_4611:HG2_PB_HySA_15072:HG2_PB_pbsv_8231:HG3_Ill_svaba_10583:HG3_PB_pbsv_8021:HG3_Ill_scalpel_8101:HG3_Ill_Krunchall_11351:HG3_Ill_GATKHC_13507:HG3_Ill_GATKHCSBGrefine_5581:HG3_Ill_250bpfermikitraw_11016:HG3_Ill_150bpfermikitraw_10727:HG2_Ill_svaba_10484:HG2_Ill_scalpel_7994:HG2_Ill_Krunchall_11630:HG2_Ill_GATKHC_13530:HG2_Ill_GATKHCSBGrefine_5665:HG2_Ill_250bpfermikitraw_11318;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11318:HG2_Ill_GATKHCSBGrefine_5665:HG2_Ill_GATKHC_13530:HG2_Ill_Krunchall_11630:HG2_Ill_scalpel_7994:HG2_Ill_svaba_10484:HG3_Ill_150bpfermikitraw_10727:HG3_Ill_250bpfermikitraw_11016:HG3_Ill_GATKHCSBGrefine_5581:HG3_Ill_GATKHC_13507:HG3_Ill_Krunchall_11351:HG3_Ill_scalpel_8101:HG3_Ill_svaba_10583;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0813008;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.274194;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=1;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=62;DistBack=-1;DistForward=7098;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=47;REFWIDENED=7:67950364-67950413;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5025.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:24:0|1:20:6:3:19:./.:0:0:0:0:0/1:11:12:./.:.:.:.:.:.
chr7	68414163	HG2_PB_SVrefine2PBcRplusDovetail_10308	T	TCTCCTTCCTCGGCCTCCCAAAGTGCTGGAATTATAGGCATGAGCCACTCTACCTACCTAATGTATGTTATATTTTTGTAGCAATGAGGTCTCGCTTTGTTGCCCAGGCTGGTCTCAAACTCCTGGACTTGAGCAGTA	20	PASS	ClusterIDs=HG4_PB_HySA_12152:HG3_Ill_250bpfermikitraw_11022:HG2_10X_SVrefine210Xhap12_5879:HG2_Ill_250bpfermikitraw_11325:HG2_PB_pbsv_8234:HG3_PB_HySA_12556:HG2_PB_HySA_15079:HG2_PB_PB10Xdip_28671:HG2_PB_PB10Xdip_28670:HG3_PB_pbsv_8025:HG3_Ill_SVrefine2DISCOVARDovetail_6216:HG2_PB_SVrefine2PBcRplusDovetail_10308:HG2_PB_SVrefine2PB10Xhap12_6005:HG2_PB_SVrefine2Falcon2Bionano_3984:HG2_PB_SVrefine2Falcon1plusDovetail_11101:HG2_Ill_SVrefine2DISCOVARplusDovetail_12118;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12118:HG2_PB_SVrefine2Falcon1plusDovetail_11101:HG2_PB_SVrefine2Falcon2Bionano_3984:HG2_PB_SVrefine2PB10Xhap12_6005:HG2_PB_SVrefine2PBcRplusDovetail_10308:HG3_Ill_SVrefine2DISCOVARDovetail_6216;NumExactMatchSVs=6;ClusterMaxShiftDist=0.077193;ClusterMaxSizeDiff=0.077193;ClusterMaxEditDist=0.274914;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=137;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=185;REFWIDENED=7:68414164-68414348;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=0.9562;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=98;MatchId=5026.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:36:1/1:0:21:0:12:./.:0:0:0:0:0/1:3:12:./.:.:.:.:.:.
chr7	68693518	HG2_Ill_SpiralSDKrefine_15934	T	TCCTCCCTCCCTTCCTTCTTTCCTTCTTTCAATTCTTCCTTCCTTCCTTCCTC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10660:HG4_Ill_GATKHCSBGrefine_5762:HG3_Ill_scalpel_8109:HG3_PB_HySA_12561:HG3_Ill_Spiral_8885:HG3_Ill_GATKHC_13520:HG3_Ill_GATKHCSBGrefine_5586:HG3_Ill_FB_7340:HG3_Ill_150bpfermikitraw_10738:HG2_Ill_manta_2364:HG2_Ill_SpiralSDKrefine_15934:HG2_Ill_GATKHC_13540:HG2_Ill_GATKHCSBGrefine_5671:HG2_Ill_250bpfermikitraw_11330;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10660:HG3_Ill_Spiral_8885:HG3_Ill_GATKHC_13520:HG3_Ill_GATKHCSBGrefine_5586:HG3_Ill_FB_7340:HG3_Ill_150bpfermikitraw_10738:HG2_Ill_manta_2364:HG2_Ill_SpiralSDKrefine_15934:HG2_Ill_GATKHC_13540:HG2_Ill_GATKHCSBGrefine_5671:HG2_Ill_250bpfermikitraw_11330;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0186916;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0188679;PBcalls=1;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=48;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=257;REFWIDENED=7:68693469-68693725;PctSeqSimilarity=0.8991;PctSizeSimilarity=0.7027;PctRecOverlap=0.1867;SizeDiff=-22;StartDistance=-50;EndDistance=-50;GTMatch=0;TruScore=59;MatchId=5027.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:17:./.:8:5:6:18:./.:0:0:0:0:0/1:10:13:./.:.:.:.:.:.
chr7	69996119	HG2_Ill_GATKHCSBGrefine_5673	T	TGAGAAATATTTGATCTAGCAAACTGTACTAAGATGAGACATAAATATCTAA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10671:HG3_PB_pbsv_8032:HG2_PB_HySA_15098:HG4_PB_HySA_12161:HG4_PB_SVrefine2Falcon1Dovetail_5016:HG4_PB_pbsv_8268:HG4_Ill_svaba_10629:HG4_Ill_manta_2030:HG4_Ill_Krunchall_11979:HG4_Ill_GATKHC_13616:HG4_Ill_GATKHCSBGrefine_5765:HG4_Ill_250bpfermikitraw_11349:HG4_Ill_150bpfermikitraw_10879:HG3_PB_SVrefine2Falcon1Dovetail_4990:HG3_Ill_svaba_10603:HG3_Ill_scalpel_8119:HG3_Ill_manta_1933:HG3_Ill_SVrefine2DISCOVARDovetail_6223:HG3_Ill_Krunchall_11375:HG3_Ill_GATKHC_13535:HG3_Ill_GATKHCSBGrefine_5587:HG3_Ill_FB_7351:HG3_Ill_250bpfermikitraw_11041:HG3_Ill_150bpfermikitraw_10754:HG2_PB_SVrefine2Falcon2Bionano_3988:HG2_Ill_svaba_10504:HG2_Ill_manta_2365:HG2_Ill_Krunchall_11651:HG2_Ill_GATKHC_13549:HG2_Ill_GATKHCSBGrefine_5673:HG2_Ill_250bpfermikitraw_11343;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10671:HG4_PB_SVrefine2Falcon1Dovetail_5016:HG4_Ill_svaba_10629:HG4_Ill_manta_2030:HG4_Ill_Krunchall_11979:HG4_Ill_GATKHC_13616:HG4_Ill_GATKHCSBGrefine_5765:HG4_Ill_250bpfermikitraw_11349:HG4_Ill_150bpfermikitraw_10879:HG3_PB_SVrefine2Falcon1Dovetail_4990:HG3_Ill_svaba_10603:HG3_Ill_scalpel_8119:HG3_Ill_manta_1933:HG3_Ill_SVrefine2DISCOVARDovetail_6223:HG3_Ill_Krunchall_11375:HG3_Ill_GATKHC_13535:HG3_Ill_GATKHCSBGrefine_5587:HG3_Ill_FB_7351:HG3_Ill_250bpfermikitraw_11041:HG3_Ill_150bpfermikitraw_10754:HG2_PB_SVrefine2Falcon2Bionano_3988:HG2_Ill_svaba_10504:HG2_Ill_manta_2365:HG2_Ill_Krunchall_11651:HG2_Ill_GATKHC_13549:HG2_Ill_GATKHCSBGrefine_5673:HG2_Ill_250bpfermikitraw_11343;NumExactMatchSVs=27;ClusterMaxShiftDist=0.12963;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.27027;PBcalls=7;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=12;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=13598;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=7:69996120-69996170;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5029.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:11:0|1:17:1:3:13:./.:0:0:0:0:0/1:19:26:./.:.:.:.:.:.
chr7	70188675	HG3_Ill_GATKHCSBGrefine_5588	C	CGTAGCTCTGCTCTTTTTTTTTTTTTTTTTTTGTAACATCAAAGTTCTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGGTATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4732:HG2_PB_HySA_15102:HG2_PB_pbsv_8241:HG3_PB_pbsv_8033:HG3_PB_assemblyticsfalcon_24804:HG2_Ill_breakscan11_3840:HG4_PB_pbsv_8269:HG2_PB_SVrefine2Falcon2Bionano_3989:HG2_PB_SVrefine2Falcon1plusDovetail_11105:HG4_Ill_MetaSV_4952:HG4_Ill_GATKHCSBGrefine_5766:HG3_Ill_MetaSV_4908:HG3_Ill_GATKHCSBGrefine_5588:HG2_Ill_GATKHCSBGrefine_5674:HG4_PB_SVrefine2PBcRDovetail_4098:HG3_PB_SVrefine2Falcon1Dovetail_4991:HG4_PB_SVrefine2Falcon1Dovetail_5017:HG2_PB_SVrefine2PB10Xhap12_6008:HG3_PB_HySA_12573:HG2_PB_HySA_15101;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5674:HG3_Ill_GATKHCSBGrefine_5588:HG3_Ill_MetaSV_4908:HG4_Ill_GATKHCSBGrefine_5766:HG4_Ill_MetaSV_4952;NumExactMatchSVs=5;ClusterMaxShiftDist=0.134777;ClusterMaxSizeDiff=0.134777;ClusterMaxEditDist=0.26506;PBcalls=13;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=413;DistBack=95323;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=7:70188676-70188693;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5030.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:26:./.:11:8:7:14:./.:0:0:0:0:0/1:31:11:./.:5:53:.:.:.
chr7	71202504	HG2_PB_SVrefine2Falcon1plusDovetail_11112	T	TTGGTGGGTTCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACGGTGAGTGTTACAACTCTTAAAGCGGCGCGTCTGGAGTTGTTCGTTCTTCCCAACGTGCTCG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5888:HG4_PB_HySA_12173:HG3_PB_pbsv_8039:HG4_PB_HySA_12172:HG2_PB_HySA_15115:HG3_PB_HySA_12588:HG4_Ill_svaba_10648:HG4_Ill_manta_2032:HG4_Ill_GATKHCSBGrefine_5774:HG4_Ill_250bpfermikitraw_11366:HG3_Ill_svaba_10622:HG3_Ill_manta_1935:HG3_Ill_Spiral_8910:HG3_Ill_GATKHCSBGrefine_5597:HG3_Ill_250bpfermikitraw_11058:HG2_Ill_svaba_10525:HG2_Ill_manta_2367:HG2_Ill_GATKHCSBGrefine_5683:HG2_Ill_250bpfermikitraw_11362:HG2_PB_PB10Xdip_28946:HG2_PB_PB10Xdip_28945:HG3_PB_assemblyticsfalcon_24820:HG4_PB_pbsv_8275:HG2_PB_pbsv_8248:HG4_PB_SVrefine2PBcRDovetail_4103:HG4_PB_SVrefine2Falcon1Dovetail_5022:HG4_Ill_SVrefine2DISCOVARDovetail_6010:HG4_Ill_MetaSV_4954:HG3_PB_SVrefine2Falcon1Dovetail_4995:HG3_Ill_SVrefine2DISCOVARDovetail_6231:HG3_Ill_MetaSV_4909:HG2_PB_SVrefine2PBcRplusDovetail_10315:HG2_PB_SVrefine2PB10Xhap12_6016:HG2_PB_SVrefine2Falcon2Bionano_3994:HG2_PB_SVrefine2Falcon1plusDovetail_11112:HG2_Ill_SVrefine2DISCOVARplusDovetail_12138:HG2_Ill_MetaSV_4733;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5888:HG4_PB_SVrefine2PBcRDovetail_4103:HG4_PB_SVrefine2Falcon1Dovetail_5022:HG4_Ill_SVrefine2DISCOVARDovetail_6010:HG4_Ill_MetaSV_4954:HG3_PB_SVrefine2Falcon1Dovetail_4995:HG3_Ill_SVrefine2DISCOVARDovetail_6231:HG3_Ill_MetaSV_4909:HG2_PB_SVrefine2PBcRplusDovetail_10315:HG2_PB_SVrefine2PB10Xhap12_6016:HG2_PB_SVrefine2Falcon2Bionano_3994:HG2_PB_SVrefine2Falcon1plusDovetail_11112:HG2_Ill_SVrefine2DISCOVARplusDovetail_12138:HG2_Ill_MetaSV_4733;NumExactMatchSVs=14;ClusterMaxShiftDist=0.163636;ClusterMaxSizeDiff=0.145455;ClusterMaxEditDist=0.340611;PBcalls=17;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=112;DistBack=35606;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=61;REFWIDENED=7:71202505-71202565;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5032.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:68:1/1:1:21:1:11:./.:0:0:0:0:1/1:0:45:./.:.:.:.:.:.
chr7	71780264	HG2_PB_HySA_15123	T	TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGAACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTCCCACTACAATTCTTTAA	10	PASS	ClusterIDs=HG2_PB_HySA_15122:HG2_PB_pbsv_8252:HG2_PB_SVrefine2Falcon1plusDovetail_11115:HG2_PB_HySA_15123:HG4_PB_SVrefine2PBcRDovetail_4105:HG2_PB_SVrefine2Falcon2Bionano_3998;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_15123;NumExactMatchSVs=1;ClusterMaxShiftDist=0.168142;ClusterMaxSizeDiff=0.165192;ClusterMaxEditDist=0.212389;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=365;DistBack=4;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=7:71780250-71780265;PctSeqSimilarity=0.9817;PctSizeSimilarity=0.9918;PctRecOverlap=0.9512;SizeDiff=-3;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=97;MatchId=5033.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:34:21:1|0:5:17:25:3:./.:0:0:0:0:./.:40:3:0/1:7:21:.:.:.
chr7	72993106	HG2_Ill_GATKHCSBGrefine_5688	G	GAGGGGCGGGGCCTGGTTGTTAGAGCGCTTTGAAGGCGGGGCCTGGCCGTTAGAGCATCTCGAGGAGCGCAGCCTGGTTATTAGAGCAAGTCGAGGGGCGGAGCCTGGGTTAGAGCGCCTCGAGGGGCCGCGCCGGGTTGTTAGAGCGCCTCGAGGGGACGAACCCAGAGGCAGAGCGTCTCGAGGGGCGGGACCTGGTTGTTAGAGCGCCTGGAGGGACAGACTACGTTAGAGCGTCTCGAGGGGCGGGGCCTGGAGTTAGAACGGCTCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4107:HG2_PB_assemblyticsfalcon_24976:HG4_PB_pbsv_8284:HG3_PB_pbsv_8049:HG3_PB_HySA_12608:HG2_PB_PB10Xdip_28969:HG2_PB_PB10Xdip_28968:HG2_PB_SVrefine2Falcon1plusDovetail_11122:HG4_Ill_manta_2033:HG4_Ill_MetaSV_4956:HG4_Ill_GATKHCSBGrefine_5780:HG4_Ill_Cortex_3445:HG3_Ill_Cortex_3469:HG2_Ill_GATKHCSBGrefine_5688:HG2_Ill_Cortex_8386:HG2_PB_HySA_15143:HG2_Ill_breakscan11_3841:HG2_PB_SVrefine2Falcon1plusDovetail_11121:HG4_Ill_SVrefine2DISCOVARDovetail_6024:HG3_PB_SVrefine2Falcon1Dovetail_5002:HG2_PB_SVrefine2PBcRplusDovetail_10320:HG2_PB_SVrefine2PB10Xhap12_6023:HG2_PB_SVrefine2Falcon2Bionano_4001:HG2_10X_SVrefine210Xhap12_5896;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_Cortex_8386:HG2_Ill_GATKHCSBGrefine_5688:HG3_Ill_Cortex_3469:HG4_Ill_Cortex_3445:HG4_Ill_GATKHCSBGrefine_5780:HG4_Ill_MetaSV_4956:HG4_Ill_manta_2033;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0514706;ClusterMaxSizeDiff=0.0514706;ClusterMaxEditDist=0.179159;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=270;DistBack=-1;DistForward=5;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=7:72993102-72993130;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5034.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:1/1:2:20:2:16:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr7	75536141	HG2_Ill_GATKHCSBGrefine_5700	A	ACACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGTCAACATGGCGAAACACTAGCTCTACTCAAAATTCAAAAATTAGCCAGGCGGAGTGGCGTGCACCTGTAATCCCAGCTACTTGGGAAGATGAGACAGGAGAATCAATTGAACCCAGGAGATGGAGGTTGCAGTGAGCCGAGATCACACCACTAAAAAATAAATAAATAAAAAGGAGAGAGAAAGATGCGGTCTCACTAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGATGGGGGGGGGGTCTCACTATGTTCTCCAGGCTGGTCTTGAACTCTCAGGCTCAAGTGATCCTCCTGCCTCGGCCTCCCCGATGCTGGGATTACAGGCATGAGCCACCATGCCTGGCCACCACTGACTTCTTATCCAGGAAAAATAATAAAGATACTTGGCTGGGCTGGGCATGGTGGCTCACGCCTGTAATCTCAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11131:HG4_PB_SVrefine2Falcon1Dovetail_5032:HG4_PB_SVrefine2PBcRDovetail_4114:HG4_PB_pbsv_8299:HG2_PB_pbsv_8273:HG3_PB_pbsv_8067:HG2_PB_PB10Xdip_28981:HG2_PB_PB10Xdip_28980:HG3_PB_HySA_12642:HG3_Ill_GATKHCSBGrefine_5618:HG4_Ill_MetaSV_4964:HG4_Ill_GATKHCSBGrefine_5793:HG2_Ill_GATKHCSBGrefine_5700:HG3_Ill_MetaSV_4920:HG2_Ill_MetaSV_4744:HG2_PB_SVrefine2Falcon1plusDovetail_11132:HG2_PB_SVrefine2Falcon2Bionano_4010:HG3_PB_SVrefine2Falcon1Dovetail_5012:HG3_Ill_SVrefine2DISCOVARDovetail_6243:HG4_Ill_SVrefine2DISCOVARDovetail_6034:HG3_PB_SVrefine2PBcRDovetail_3779:HG2_PB_SVrefine2PB10Xhap12_6036:HG2_PB_SVrefine2PBcRplusDovetail_10332:HG2_Ill_SVrefine2DISCOVARplusDovetail_12152:HG2_10X_SVrefine210Xhap12_5907;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5700:HG4_Ill_GATKHCSBGrefine_5793:HG4_Ill_MetaSV_4964;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0409836;ClusterMaxSizeDiff=0.0286299;ClusterMaxEditDist=0.218182;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=484;DistBack=-215;DistForward=213;DistMin=-215;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=238;REFWIDENED=7:75536119-75536356;PctSeqSimilarity=0.999;PctSizeSimilarity=0.9979;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5036.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:1/1:0:25:0:16:./.:0:0:0:0:1/1:0:35:1/1:4:61:.:.:.
chr7	76018141	HG3_Ill_MetaSV_4922	C	CTGGCCAAAATGGTGAAACCCGGTCACTACTAAAAATACAAAAATTAGCCGGGTGTGGTAGCGCATGGCCAAAATGGTGAAACCCGGTCACTACTAAAAATACAAAAATTAGCCAGGTGTGGTAGTGCA	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_5704:HG4_PB_SVrefine2Falcon1Dovetail_5035:HG3_PB_pbsv_8073:HG3_PB_HySA_12652:HG4_PB_HySA_12222:HG4_PB_pbsv_8301:HG2_PB_HySA_15192:HG2_PB_SVrefine2PBcRplusDovetail_10333:HG2_Ill_breakscan11_3844:HG2_PB_pbsv_8279:HG2_PB_SVrefine2PB10Xhap12_6039:HG4_PB_SVrefine2PBcRDovetail_4115:HG4_Ill_manta_2037:HG4_Ill_MetaSV_4965:HG4_Ill_GATKHCSBGrefine_5794:HG3_PB_SVrefine2Falcon1Dovetail_5014:HG3_Ill_manta_1941:HG3_Ill_MetaSV_4922:HG3_Ill_GATKHCSBGrefine_5622:HG2_PB_SVrefine2Falcon1plusDovetail_11135:HG2_Ill_manta_2374:HG2_Ill_MetaSV_4745;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5704:HG4_PB_SVrefine2PBcRDovetail_4115:HG4_Ill_manta_2037:HG4_Ill_MetaSV_4965:HG4_Ill_GATKHCSBGrefine_5794:HG3_PB_SVrefine2Falcon1Dovetail_5014:HG3_Ill_manta_1941:HG3_Ill_MetaSV_4922:HG3_Ill_GATKHCSBGrefine_5622:HG2_PB_SVrefine2Falcon1plusDovetail_11135:HG2_Ill_manta_2374:HG2_Ill_MetaSV_4745;NumExactMatchSVs=12;ClusterMaxShiftDist=0.171875;ClusterMaxSizeDiff=0.140625;ClusterMaxEditDist=0.260223;PBcalls=12;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=128;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=7:76018142-76018207;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5038.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:22:0|1:14:1:2:26:./.:0:0:0:0:0/1:19:12:./.:.:.:.:.:.
chr7	76044130	HG2_PB_PB10Xdip_28990	T	CTGCCTCAGCCTCCTGAGTAACTGGGATTACAGGCGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCAGGCCAAAAAGAATTGTATATAAATGTCACCATATAGTGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCGAGGCGGGCTGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAATACAAACATTAGCTGGGCGTGGTGGCGGGCGCCTGTAGTGCCATCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGGGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGCGAGACCCTATCTCAAAACAACAACAACAATGGAAGTCACCATATAGTATGAACACTTTTGAGTTTCCTTTATTTCACTCAGCATAATTATTTTATTTTTTTAGAGGAAGGGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGAGGTGCGATCTCGGCTCACTGCAGCCTCAGACTCCTGGGCTCAAGCAATCCTC	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_6037:HG2_PB_pbsv_8280:HG4_PB_pbsv_8302:HG2_Ill_breakscan11_3845:HG3_PB_pbsv_8074:HG3_Ill_MetaSV_4923:HG4_Ill_manta_2038:HG3_Ill_GATKHCSBGrefine_5623:HG4_Ill_MetaSV_4966:HG4_Ill_GATKHCSBGrefine_5795:HG2_Ill_GATKHCSBGrefine_5705:HG4_PB_HySA_12224:HG2_PB_PB10Xdip_28991:HG2_PB_PB10Xdip_28990:HG2_PB_SVrefine2Falcon1plusDovetail_11136:HG2_PB_SVrefine2Falcon2Bionano_4011:HG3_Ill_SVrefine2DISCOVARDovetail_6247:HG2_10X_SVrefine210Xhap12_5912:HG4_PB_SVrefine2Falcon1Dovetail_5036:HG4_PB_SVrefine2PBcRDovetail_4116:HG2_PB_SVrefine2PB10Xhap12_6041:HG2_PB_SVrefine2PBcRplusDovetail_10334:HG2_Ill_SVrefine2DISCOVARplusDovetail_12156:HG3_PB_SVrefine2PBcRDovetail_3783:HG3_PB_SVrefine2Falcon1Dovetail_5015;NumClusterSVs=25;ExactMatchIDs=HG2_PB_PB10Xdip_28990:HG2_PB_PB10Xdip_28991;NumExactMatchSVs=2;ClusterMaxShiftDist=0.06995;ClusterMaxSizeDiff=0.0670949;ClusterMaxEditDist=0.242382;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=681;DistBack=-33;DistForward=12060;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8300;REFWIDENED=7:76044024-76034399;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9971;PctRecOverlap=0.9971;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5039.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:1:21:0:24:./.:0:0:0:0:1/1:0:25:1/1:4:114:.:.:.
chr7	76062441	HG3_Ill_150bpfermikitraw_10806	T	TTTGGTTTTGGTTGGTTTTGGTTGGTTTTGGTTGGTTTTGGTTGGTTTTGGTTGGTTTTGG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_11403:HG3_PB_HySA_12654:HG2_PB_HySA_15194:HG2_PB_pbsv_8281:HG2_PB_SVrefine2Falcon2Bionano_4012:HG4_Ill_svaba_10695:HG3_Ill_svaba_10664:HG3_Ill_250bpfermikitraw_11092:HG3_Ill_150bpfermikitraw_10806:HG2_Ill_svaba_10573:HG2_Ill_SVrefine2DISCOVARplusDovetail_12157:HG2_Ill_Krunchall_11715:HG2_Ill_GATKHC_13632:HG2_Ill_GATKHCSBGrefine_5706:HG3_PB_SVrefine2PBcRDovetail_3784;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11403:HG4_Ill_svaba_10695:HG3_Ill_svaba_10664:HG3_Ill_250bpfermikitraw_11092:HG3_Ill_150bpfermikitraw_10806:HG2_Ill_svaba_10573:HG2_Ill_SVrefine2DISCOVARplusDovetail_12157:HG2_Ill_Krunchall_11715:HG2_Ill_GATKHC_13632:HG2_Ill_GATKHCSBGrefine_5706;NumExactMatchSVs=10;ClusterMaxShiftDist=0.293578;ClusterMaxSizeDiff=0.275229;ClusterMaxEditDist=0.311927;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=48;REFWIDENED=7:76062442-76062489;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5040.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:34:1|0:2:31:24:4:./.:0:0:0:0:0/1:34:28:./.:.:.:.:.:.
chr7	77139270	HG4_PB_pbsv_8313	G	GTGGCGGGGGTCAGCCCCCGCCGGCCAGCCGCCCCGTCCGGTAGGGAGGTGGGGGGCAGCCCCCCGCCCGGCCATCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGACCCCCCGCCTGGCCAGCCGTGACGTCCGGGAGGGAGGCTGGGCGGGTCAGCCCCCGCCCGGCCAGCGCCCCGTCCGGCTGAGGTGAGCGGGCGCCTCTGCCCGGCCGCCTCCTACTGGGAAGTGAGGAGCCCCTCTGCACCGGCCCAGCCGCCCCGTCCGGGAGGGAGCGTGGGGGGGTCAGCCCCCGCTCGCCCAGCCGCCCCGTCCAGGGAAGGAGGTGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGTGAGGCGCGCCTCTGCCCGGCCGCCCCTTATTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGGCCGCCCCGGTCCGGGAGGAGGTGGGCCGGGCGTCAGCCCCGCCCAGGAGCCCAGCCGCCCCGTCCGGGAAGGGAGGTGGGGGGTCAGCCCCCCGCTCCGGCCAATCTGCCGCCACCAGTCCACGGGTCAGGGTAGGTGATCGGGGTGTCAGCCCCCGCGTCCTGGCCAGCCGCCCCCGTCCGGGAGCGTGAGGGCGCCTTCTGCCCGGGCTGCCCCTACTGGGAGCTGAGGAGCCCCTCTGCACCGGCACAGCCGCCCCGTCTGGGTCAGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6050:HG4_PB_pbsv_8313:HG2_PB_PB10Xdip_29025:HG2_PB_pbsv_8290:HG2_PB_PB10Xdip_29024:HG3_PB_pbsv_8082:HG4_PB_SVrefine2Falcon1Dovetail_5044:HG3_PB_SVrefine2Falcon1Dovetail_5021:HG2_PB_SVrefine2Falcon2Bionano_4016;NumClusterSVs=9;ExactMatchIDs=HG4_PB_pbsv_8313;NumExactMatchSVs=1;ClusterMaxShiftDist=0.157695;ClusterMaxSizeDiff=0.153146;ClusterMaxEditDist=0.278652;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=709;DistBack=29;DistForward=48;DistMin=29;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=822;REFWIDENED=7:77138499-77139320;PctSeqSimilarity=0.9504;PctSizeSimilarity=0.9591;PctRecOverlap=0.8956;SizeDiff=29;StartDistance=60;EndDistance=60;GTMatch=1;TruScore=93;MatchId=5041.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:50:1/1:3:16:0:23:./.:0:0:0:0:./.:20:1:0/1:13:13:.:.:.
chr7	77737205	HG4_PB_pbsv_8318	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACGGAGTCTTGCCTGTCGCCCAGGCTGGCAGGCAGCTGGCGGATCTCGGCTCACTTGCAAGCTCCGCCTCCCGGGGTTCACGCCTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGGACTACAGGCGCCCGCCACTACGCCCGGCTTTTAATTTTTTGATTTTTAGTTAGAGACGGGGGTTTCACCGTTTTTAGCCAGGATGTCTCGATCTCCTGACCTCGTGCTATCCGCCGCCTCGGCCTCCCAAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCCGGCCTTCCTCTTTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29054:HG2_PB_pbsv_8292:HG4_PB_pbsv_8318:HG3_PB_SVrefine2Falcon1Dovetail_5026:HG2_PB_assemblyticsfalcon_25026:HG2_PB_SVrefine2PB10Xhap12_6052:HG2_Ill_breakscan11_3847:HG4_PB_SVrefine2Falcon1Dovetail_5047:HG2_PB_SVrefine2Falcon2Bionano_4018:HG2_PB_HySA_15209:HG2_PB_PB10Xdip_29053;NumClusterSVs=11;ExactMatchIDs=HG4_PB_pbsv_8318;NumExactMatchSVs=1;ClusterMaxShiftDist=0.129134;ClusterMaxSizeDiff=0.12093;ClusterMaxEditDist=0.170543;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=-1;DistForward=5238;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:77737206-77737206;PctSeqSimilarity=0.9559;PctSizeSimilarity=0.9939;PctRecOverlap=0.9572;SizeDiff=-2;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=96;MatchId=5042.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:43:0|1:21:3:5:36:./.:0:0:0:0:0/1:28:6:0/1:8:11:.:.:.
chr7	80632650	HG3_Ill_250bpfermikitraw_11144	C	CAACAATCTTTCTCCATTTCAATTATACTATTACACGGCAGTCAACATTTTAGAGTCTGT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29066:HG2_PB_pbsv_8306:HG2_PB_HySA_15247:HG4_Ill_svaba_10730:HG4_Ill_manta_2047:HG4_Ill_SVrefine2DISCOVARDovetail_6056:HG4_Ill_Krunchall_12082:HG4_Ill_GATKHC_13747:HG4_Ill_GATKHCSBGrefine_5812:HG4_Ill_Cortex_3454:HG4_Ill_250bpfermikitraw_11443:HG4_Ill_150bpfermikitraw_10978:HG3_PB_SVrefine2Falcon1Dovetail_5033:HG3_Ill_svaba_10711:HG3_Ill_manta_1950:HG3_Ill_Spiral_8978:HG3_Ill_Krunchall_11490:HG3_Ill_GATKHC_13670:HG3_Ill_GATKHCSBGrefine_5646:HG3_Ill_Cortex_3478:HG3_Ill_250bpfermikitraw_11144:HG3_Ill_150bpfermikitraw_10857:HG2_PB_SVrefine2PB10Xhap12_6057:HG2_PB_SVrefine2Falcon2Bionano_4023:HG2_Ill_svaba_10615:HG2_Ill_manta_2382:HG2_Ill_SpiralSDKrefine_16023:HG2_Ill_SVrefine2DISCOVARplusDovetail_12176:HG2_Ill_Krunchall_11763:HG2_Ill_GATKHC_13682:HG2_Ill_GATKHCSBGrefine_5723:HG2_Ill_Cortex_8404:HG2_Ill_250bpfermikitraw_11447:HG2_Ill_150bpfermikitraw_10773:HG2_10X_SVrefine210Xhap12_5931:HG2_PB_PB10Xdip_29067;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5931:HG2_Ill_150bpfermikitraw_10773:HG2_Ill_250bpfermikitraw_11447:HG2_Ill_Cortex_8404:HG2_Ill_GATKHCSBGrefine_5723:HG2_Ill_GATKHC_13682:HG2_Ill_Krunchall_11763:HG2_Ill_SVrefine2DISCOVARplusDovetail_12176:HG2_Ill_SpiralSDKrefine_16023:HG2_Ill_manta_2382:HG2_Ill_svaba_10615:HG2_PB_SVrefine2Falcon2Bionano_4023:HG2_PB_SVrefine2PB10Xhap12_6057:HG3_Ill_150bpfermikitraw_10857:HG3_Ill_250bpfermikitraw_11144:HG3_Ill_Cortex_3478:HG3_Ill_GATKHCSBGrefine_5646:HG3_Ill_GATKHC_13670:HG3_Ill_Krunchall_11490:HG3_Ill_Spiral_8978:HG3_Ill_manta_1950:HG3_Ill_svaba_10711:HG3_PB_SVrefine2Falcon1Dovetail_5033:HG4_Ill_150bpfermikitraw_10978:HG4_Ill_250bpfermikitraw_11443:HG4_Ill_Cortex_3454:HG4_Ill_GATKHCSBGrefine_5812:HG4_Ill_GATKHC_13747:HG4_Ill_Krunchall_12082:HG4_Ill_SVrefine2DISCOVARDovetail_6056:HG4_Ill_manta_2047:HG4_Ill_svaba_10730;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.147541;PBcalls=7;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=59;DistBack=13282;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2603;REFWIDENED=7:80632651-80622762;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5045.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:2:30:1:19:./.:0:0:0:0:1/1:1:63:./.:.:.:.:.:.
chr7	80695306	HG2_10X_SVrefine210Xhap12_5932	A	AGAGTCTCTCTCTGTCACCCAGGCTGGAGTGCCGTGGTGCGATCTCGGCTCACTGCAACCCCTGCCTCCTGCGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCCCATGCCACCACACCCAGCTAATTTTTTATATTTTTGATAGAGATGGGGTTTCACCATGTTGACCAGGCTGTTCTTACACTCCTGACCTCGAGGGATGCGCCTGCCTTGGCCTCTCAAACTGCTGGGATTACCGGCGTGAGCCACCATGCCCGGCCCTCCCTTACTCTTAAAGTAAGGAGACAACACAGAAATTTCCTTTTAATACTGTTAGATGATGTTTGAGGAAGACATCATACTCTAAATACTTTTAGAAGACTAAAGCTAACTGAGAATAGCAGAGCAGAAAGAGAAAAGAAACTTGGTTCCTTGATGATGTCCTGAAACCAGTTAATTAACTCTGTACTGACTGTACTTCCACTCTTCTTATGAGAGATAAATATTTTCATTTTATTTAAGCCAATTTCAGATGGGTTTTTGTTCTGTAGAGCCAAAAGTATCCTAATTAATACAAACTCCCATAGCTCCTAAGAGAGAGTATATTTGCTGATATGTACCTCACCTTTGCTAATATTCACCTCCTATGTGAAAATGATCTTTAATTTCTACACCCTTAAAATCCACCCTCTCTTTTGTGCCATTACAGTATTACAGTTTATACATGCAGGTTTTACACATACCTACAAGATAGCATTGCAATATTTTGACAAATCCAAGGCATTTTTTTGTGTACTTGGCACATATATAGTCTTGCTACCTACATATCAATAAAACATGAGAAAATGAATAACTTTTTCAATTAATTTCTTTAGACTTATATAGTTATAGGACTGGCTATCACATAAATAAGCAAATTATTTTGTTGATGAAGATAAATGGTAGTTCTACGTGCATAAGTTTTAAACATAGTTTTTTGTTTAGTAGTTTTAAACATGAAAAGACAAAAATCACATATTTAAACAGTTTTGATAATGCTACATAGTTTTACTTTATTTTATTTGAGATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6059:HG4_PB_pbsv_8334:HG2_PB_pbsv_8308:HG2_Ill_Spiral_588:HG2_PB_PB10Xdip_29069:HG3_Ill_MetaSV_4934:HG3_Ill_GATKHCSBGrefine_5648:HG2_Ill_MetaSV_4753:HG4_Ill_MetaSV_4974:HG2_PB_HySA_15251:HG4_PB_HySA_12277:HG4_Ill_SVrefine2DISCOVARDovetail_6057:HG4_PB_SVrefine2Falcon1Dovetail_5057:HG2_PB_SVrefine2Falcon2Bionano_4025:HG2_Ill_SVrefine2DISCOVARplusDovetail_12177:HG2_10X_SVrefine210Xhap12_5932;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5932:HG2_Ill_SVrefine2DISCOVARplusDovetail_12177:HG2_PB_SVrefine2Falcon2Bionano_4025;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0553761;ClusterMaxSizeDiff=0.0507614;ClusterMaxEditDist=0.193868;PBcalls=8;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1065;DistBack=4140;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=157;REFWIDENED=7:80695307-80695463;PctSeqSimilarity=0.9943;PctSizeSimilarity=1;PctRecOverlap=0.9249;SizeDiff=0;StartDistance=-80;EndDistance=-80;GTMatch=0;TruScore=97;MatchId=5046.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:44:0|1:29:8:0:34:./.:0:0:0:0:0/1:13:20:0/1:39:62:.:1226:.
chr7	80761421	HG2_Ill_250bpfermikitraw_11450	T	TATATATATGTGTGTGTGTGTATATATATATACATATATATATACACACACACACAC	20	PASS	ClusterIDs=HG3_PB_pbsv_8105:HG3_PB_HySA_12716:HG2_PB_HySA_15253:HG2_PB_PB10Xdip_29070:HG2_PB_pbsv_8309:HG3_Ill_GATKHC_13673:HG4_PB_pbsv_8335:HG4_Ill_svaba_10732:HG2_PB_PB10Xdip_29071:HG4_Ill_Krunchall_12086:HG4_Ill_GATKHC_13750:HG4_Ill_GATKHCSBGrefine_5815:HG4_Ill_250bpfermikitraw_11446:HG2_Ill_svaba_10617:HG2_Ill_Krunchall_11767:HG2_Ill_GATKHC_13685:HG2_Ill_GATKHCSBGrefine_5727:HG2_Ill_250bpfermikitraw_11450:HG2_PB_assemblyticsfalcon_25054:HG3_Ill_GATKHCSBGrefine_5649:HG2_Ill_SpiralSDKrefine_16026:HG4_PB_HySA_12279;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11450:HG2_Ill_GATKHCSBGrefine_5727:HG2_Ill_GATKHC_13685:HG2_Ill_Krunchall_11767:HG2_Ill_svaba_10617:HG4_Ill_250bpfermikitraw_11446:HG4_Ill_GATKHCSBGrefine_5815:HG4_Ill_GATKHC_13750:HG4_Ill_Krunchall_12086:HG4_Ill_svaba_10732;NumExactMatchSVs=10;ClusterMaxShiftDist=0.211382;ClusterMaxSizeDiff=0.211382;ClusterMaxEditDist=0.274809;PBcalls=9;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=1;DistForward=5;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=7:80761422-80761429;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5047.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:0:23:1:31:./.:0:0:0:0:0/1:17:27:./.:.:.:.:.:.
chr7	80884543	HG2_Ill_SVrefine2DISCOVARplusDovetail_12181	A	ATACAGCCTCAGATAGTGTTATCTTGAATGTATTTTAGAGACATTGCAATTATTTAGGGATAATCAAGTACTGATACTTGAGAACAAAAAAAACCCAGACTCTTCTTCCTCATTCACTGAGGAATAATTAGAGATTTTGGTTAGCCGGAAAAAAAAAAAAATAAAAACTTGAAGCAGGAATTGGACTGAAATTAAGCCTATGTTCCTTTTGAGCTCTCTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6061:HG4_PB_pbsv_8337:HG2_PB_pbsv_8311:HG3_PB_pbsv_8107:HG2_Ill_breakscan11_3849:HG2_PB_assemblyticsfalcon_25056:HG2_PB_PB10Xdip_29073:HG2_PB_PB10Xdip_29072:HG4_PB_HySA_12282:HG2_PB_HySA_15256:HG4_PB_SVrefine2Falcon1Dovetail_5059:HG4_Ill_manta_2048:HG4_Ill_SVrefine2DISCOVARDovetail_6060:HG4_Ill_MetaSV_4976:HG4_Ill_GATKHCSBGrefine_5817:HG4_Ill_Cortex_3456:HG3_Ill_MetaSV_4936:HG3_Ill_GATKHCSBGrefine_5651:HG3_Ill_Cortex_3480:HG2_Ill_SVrefine2DISCOVARplusDovetail_12181:HG2_Ill_MetaSV_4754:HG2_Ill_GATKHCSBGrefine_5729:HG2_Ill_Cortex_8408:HG2_10X_SVrefine210Xhap12_5936:HG3_PB_SVrefine2Falcon1Dovetail_5035;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5936:HG2_Ill_Cortex_8408:HG2_Ill_GATKHCSBGrefine_5729:HG2_Ill_MetaSV_4754:HG2_Ill_SVrefine2DISCOVARplusDovetail_12181:HG3_Ill_Cortex_3480:HG3_Ill_GATKHCSBGrefine_5651:HG3_Ill_MetaSV_4936:HG4_Ill_Cortex_3456:HG4_Ill_GATKHCSBGrefine_5817:HG4_Ill_MetaSV_4976:HG4_Ill_SVrefine2DISCOVARDovetail_6060:HG4_Ill_manta_2048:HG4_PB_SVrefine2Falcon1Dovetail_5059;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0633484;ClusterMaxEditDist=0.179825;PBcalls=11;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=220;DistBack=270;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=7:80884544-80884546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5048.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:32:0|1:17:1:0:34:./.:0:0:0:0:0/1:17:11:./.:.:.:.:.:.
chr7	81789147	HG2_PB_SVrefine2Falcon2Bionano_4031	T	TAAAAAAAGACTGTAATTAAAATATTATTTTGATAAATATTTTCCATGTAATAATATCTGGACTAAATTTCAACAGTACTATCTTTCAGTCCACCTTACAGTAAGTTTATCTTTTCATATCCCTCTAATTTGCCTCCAGTAAATTATTAGATATCGTATAGCTACTGATTTCTTACTTAATTCCATTGTGGTCAGAAAACATACTTTGTATGGTTTGTTTCCTTTTTTGGTGAACATAGCATGTACACTTGAAAATCATGTGTATTCTATAGTTGTGGGTATTATTTTGGTTCAGGTGGTTGATAGTGTTGTTCAGATCACTTATGTCTTTTTTGAATTTTGCCTAGCTCTTCTATCAAATGCTGAGGGAAGAGTGTTGGTATCTCTATAATAATGAAATAATCTATAGCTGCCTTTAATTCTGTTCTTTTTTGCTTCATACATTTTGATGCTCTATTATTAAGTATACCTGTATTCATGATTTTTATGTCTTTCCTATGGATGGAACTTTTATCATTGTAAAGTGTTCCTTTTTGTAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5941:HG3_PB_SVrefine2Falcon1Dovetail_5040:HG4_PB_SVrefine2Falcon1Dovetail_5064:HG2_PB_SVrefine2Falcon2Bionano_4031:HG2_PB_SVrefine2PBcRplusDovetail_10341;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4031;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00359712;ClusterMaxSizeDiff=0.00359712;ClusterMaxEditDist=0.00539568;PBcalls=4;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=554;DistBack=14145;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=7:81789148-81789164;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9982;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5049.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:28:0|1:35:0:0:32:./.:0:0:0:0:0/1:23:11:0/1:10:40:.:.:.
chr7	82178788	HG2_PB_SVrefine2PBcRplusDovetail_10342	G	GAAATAGCTGGCACACGGCGGCGCGGTGGCTCACGCTGTAATCCAGCACTTTGGAGCCGAGCGGGTGGATCATGAGGTCAGGAATCGAGACCATCCTGGCTAACAAGGTGAACCCCGTCTCTACTAAAATACAAAAATTAGCCGGCGCGGTGGCGGGCGCCTGTAGTCCAGCTACTCGGAGGCTGAGCAGGAGAATGGCGTGAACCGGAAGCGGAGCTTGCAGTGAGCCGAGATGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6069:HG4_PB_pbsv_8342:HG2_PB_pbsv_8317:HG2_PB_PB10Xdip_29098:HG2_PB_PB10Xdip_29097:HG2_PB_SVrefine2PB10Xhap12_6070:HG2_PB_SVrefine2PBcRplusDovetail_10342:HG4_PB_HySA_12289:HG2_PB_assemblyticsfalcon_25066:HG2_PB_HySA_15263:HG2_Ill_breakscan11_3850:HG3_PB_SVrefine2Falcon1Dovetail_5041:HG4_PB_SVrefine2Falcon1Dovetail_5065;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_10342;NumExactMatchSVs=1;ClusterMaxShiftDist=0.231125;ClusterMaxSizeDiff=0.231125;ClusterMaxEditDist=0.269919;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=12572;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:82178789-82178803;PctSeqSimilarity=0.9634;PctSizeSimilarity=0.9286;PctRecOverlap=0.9259;SizeDiff=-25;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=93;MatchId=5050.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:22:36:./.:6:27:15:6:./.:0:0:0:0:./.:29:3:0/1:6:11:.:.:.
chr7	82430514	HG4_PB_SVrefine2Falcon1Dovetail_5066	T	CGTTATATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACAGCCATTCTCCTGCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCACTACGCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCGCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGGCGTGAGCCACCGCGCCCGGCCCATTAC	20	PASS	ClusterIDs=HG2_PB_HySA_15265:HG4_PB_pbsv_8343:HG4_PB_assemblyticsfalcon_24507:HG2_PB_SVrefine2Falcon1plusDovetail_11141:HG2_PB_pbsv_8319:HG4_PB_SVrefine2Falcon1Dovetail_5066:HG4_Ill_MetaSV_4980:HG2_PB_SVrefine2Falcon2Bionano_4032:HG3_PB_SVrefine2Falcon1Dovetail_5042:HG4_PB_HySA_12291;NumClusterSVs=10;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_5066;NumExactMatchSVs=1;ClusterMaxShiftDist=0.125806;ClusterMaxSizeDiff=0.122581;ClusterMaxEditDist=0.216641;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=-11;DistForward=11;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=7:82430515-82430525;PctSeqSimilarity=0.9816;PctSizeSimilarity=0.9969;PctRecOverlap=0.9812;SizeDiff=-1;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=98;MatchId=5051.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:27:0|1:45:0:1:25:./.:0:0:0:0:0/1:27:16:0/1:9:11:.:.:.
chr7	82851769	HG3_PB_HySA_12736	T	TTACGGAGTCTCGCTCTGTTGCCCAGCCGGACTGCGGACTGCAATGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGTTCACGCCATTTCTCCTGCCTCAGCCTCCGAGTAGCTGGGACTACAGGCGCCGCCAGCGCCCGGCTAATTTTTTGTATTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCGGATGTGCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTTCCAAAGTGCTGGATTACAGCGTGAGCCACCGCGCCCGGCCAGAACCAGTTTAACTGTTCCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5944:HG3_PB_HySA_12736:HG2_PB_assemblyticsfalcon_25072:HG3_PB_pbsv_8115:HG2_PB_HySA_15267:HG2_PB_pbsv_8322:HG3_PB_SVrefine2Falcon1Dovetail_5043;NumClusterSVs=7;ExactMatchIDs=HG3_PB_HySA_12736;NumExactMatchSVs=1;ClusterMaxShiftDist=0.13125;ClusterMaxSizeDiff=0.13125;ClusterMaxEditDist=0.257485;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=298;DistBack=13;DistForward=36395;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:82851770-82851770;PctSeqSimilarity=0.9566;PctSizeSimilarity=0.949;PctRecOverlap=0.8889;SizeDiff=-16;StartDistance=27;EndDistance=27;GTMatch=0;TruScore=93;MatchId=5053.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:32:./.:20:8:3:23:./.:0:0:0:0:0/1:26:7:./.:.:.:.:.:.
chr7	83089942	HG3_Ill_GATKHCSBGrefine_5661	T	TGCTTTTCTGGGGGAGGGGCAAGGACCCCTCAACCCCTTCTCCTTCACCCTTAGCGGCAAGTCCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5948:HG3_PB_pbsv_8118:HG2_PB_pbsv_8328:HG2_PB_assemblyticsfalcon_25076:HG4_PB_pbsv_8349:HG2_PB_PB10Xdip_29105:HG2_PB_PB10Xdip_29106:HG3_PB_HySA_12742:HG2_PB_HySA_15277:HG2_PB_SVrefine2Falcon2Bionano_4036:HG4_Ill_svaba_10756:HG4_Ill_SVrefine2DISCOVARDovetail_6073:HG4_Ill_Krunchall_12110:HG4_Ill_GATKHC_13773:HG4_Ill_GATKHCSBGrefine_5830:HG4_Ill_250bpfermikitraw_11471:HG4_Ill_150bpfermikitraw_11002:HG3_Ill_svaba_10737:HG3_Ill_Krunchall_11512:HG3_Ill_GATKHC_13701:HG3_Ill_GATKHCSBGrefine_5661:HG3_Ill_250bpfermikitraw_11169:HG3_Ill_150bpfermikitraw_10881:HG2_PB_SVrefine2PBcRplusDovetail_10345:HG2_PB_SVrefine2PB10Xhap12_6075:HG2_Ill_svaba_10642:HG2_Ill_SpiralSDKrefine_16045:HG2_Ill_SVrefine2DISCOVARplusDovetail_12191:HG2_Ill_Krunchall_11791:HG2_Ill_GATKHC_13712:HG2_Ill_GATKHCSBGrefine_5741:HG2_Ill_250bpfermikitraw_11478;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5948:HG4_Ill_svaba_10756:HG4_Ill_SVrefine2DISCOVARDovetail_6073:HG4_Ill_Krunchall_12110:HG4_Ill_GATKHC_13773:HG4_Ill_GATKHCSBGrefine_5830:HG4_Ill_250bpfermikitraw_11471:HG4_Ill_150bpfermikitraw_11002:HG3_Ill_svaba_10737:HG3_Ill_Krunchall_11512:HG3_Ill_GATKHC_13701:HG3_Ill_GATKHCSBGrefine_5661:HG3_Ill_250bpfermikitraw_11169:HG3_Ill_150bpfermikitraw_10881:HG2_PB_SVrefine2PBcRplusDovetail_10345:HG2_PB_SVrefine2PB10Xhap12_6075:HG2_Ill_svaba_10642:HG2_Ill_SpiralSDKrefine_16045:HG2_Ill_SVrefine2DISCOVARplusDovetail_12191:HG2_Ill_Krunchall_11791:HG2_Ill_GATKHC_13712:HG2_Ill_GATKHCSBGrefine_5741:HG2_Ill_250bpfermikitraw_11478;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0620155;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.140625;PBcalls=11;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=64;DistBack=54002;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=7:83089943-83089970;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5054.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:2:17:1:19:./.:0:0:0:0:1/1:1:28:./.:.:.:.:.:.
chr7	83929121	HG2_Ill_Krunchall_11802	A	ATAAAAAACTTACAGCTGGGAGCAGTGGCTCACAACTGTAATCCCAGCACTTTAGGAGGCCGAGGGGGGTG	20	PASS	ClusterIDs=HG2_PB_pbsv_8338:HG2_PB_PB10Xdip_29112:HG2_PB_PB10Xdip_29111:HG4_PB_assemblyticsfalcon_24526:HG4_Ill_scalpel_7932:HG4_Ill_manta_2062:HG4_Ill_Krunchall_12121:HG4_Ill_GATKHC_13783:HG4_Ill_GATKHCSBGrefine_5843:HG4_Ill_250bpfermikitraw_11479:HG4_Ill_150bpfermikitraw_11009:HG3_Ill_scalpel_8232:HG3_Ill_manta_1963:HG3_Ill_Spiral_9016:HG3_Ill_Krunchall_11527:HG3_Ill_GATKHC_13716:HG3_Ill_GATKHCSBGrefine_5672:HG3_Ill_FB_7444:HG3_Ill_250bpfermikitraw_11184:HG3_Ill_150bpfermikitraw_10895:HG2_PB_assemblyticsfalcon_25084:HG2_Ill_scalpel_8115:HG2_Ill_manta_2396:HG2_Ill_Krunchall_11802:HG2_Ill_GATKHC_13725:HG2_Ill_GATKHCSBGrefine_5753:HG2_Ill_250bpfermikitraw_11490:HG2_Ill_150bpfermikitraw_10815:HG4_Ill_svaba_10762:HG3_Ill_svaba_10752:HG2_Ill_svaba_10655:HG4_PB_pbsv_8357:HG2_PB_HySA_15288:HG4_PB_HySA_12312:HG3_PB_HySA_12757:HG3_PB_pbsv_8129;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10815:HG2_Ill_250bpfermikitraw_11490:HG2_Ill_GATKHCSBGrefine_5753:HG2_Ill_GATKHC_13725:HG2_Ill_Krunchall_11802:HG2_Ill_manta_2396:HG2_Ill_scalpel_8115:HG2_PB_assemblyticsfalcon_25084:HG3_Ill_150bpfermikitraw_10895:HG3_Ill_250bpfermikitraw_11184:HG3_Ill_FB_7444:HG3_Ill_GATKHCSBGrefine_5672:HG3_Ill_GATKHC_13716:HG3_Ill_Krunchall_11527:HG3_Ill_Spiral_9016:HG3_Ill_manta_1963:HG3_Ill_scalpel_8232:HG4_Ill_150bpfermikitraw_11009:HG4_Ill_250bpfermikitraw_11479:HG4_Ill_GATKHCSBGrefine_5843:HG4_Ill_GATKHC_13783:HG4_Ill_Krunchall_12121:HG4_Ill_manta_2062:HG4_Ill_scalpel_7932;NumExactMatchSVs=24;ClusterMaxShiftDist=0.056338;ClusterMaxSizeDiff=0.028169;ClusterMaxEditDist=0.211268;PBcalls=10;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=0;DistForward=13095;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=7:83929120-83929122;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5055.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:86:1/1:0:24:2:22:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr7	84590423	HG2_Ill_250bpfermikitraw_11494	C	CTTTCCAAATGAGACAGAAACAAACTTTAGCAAACAGACTTAAAGATGCTTTCA	20	PASS	ClusterIDs=HG3_PB_pbsv_8132:HG4_PB_pbsv_8362:HG2_Ill_breakscan11_3852:HG4_PB_assemblyticsfalcon_24529:HG4_Ill_svaba_10768:HG4_Ill_manta_2063:HG4_Ill_Krunchall_12129:HG4_Ill_GATKHC_13790:HG4_Ill_GATKHCSBGrefine_5851:HG4_Ill_Cortex_3465:HG4_Ill_250bpfermikitraw_11483:HG4_Ill_150bpfermikitraw_11015:HG3_Ill_svaba_10757:HG3_Ill_manta_1965:HG3_Ill_Spiral_9022:HG3_Ill_Krunchall_11531:HG3_Ill_GATKHC_13722:HG3_Ill_GATKHCSBGrefine_5676:HG3_Ill_Cortex_3491:HG3_Ill_250bpfermikitraw_11187:HG3_Ill_150bpfermikitraw_10900:HG2_PB_assemblyticsfalcon_25092:HG2_Ill_svaba_10659:HG2_Ill_manta_2399:HG2_Ill_SpiralSDKrefine_16056:HG2_Ill_Krunchall_11807:HG2_Ill_GATKHC_13733:HG2_Ill_GATKHCSBGrefine_5759:HG2_Ill_Cortex_8423:HG2_Ill_250bpfermikitraw_11494:HG2_Ill_150bpfermikitraw_10822:HG2_PB_HySA_15295:HG4_PB_HySA_12319:HG3_PB_HySA_12761:HG2_PB_pbsv_8344;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10822:HG2_Ill_250bpfermikitraw_11494:HG2_Ill_Cortex_8423:HG2_Ill_GATKHCSBGrefine_5759:HG2_Ill_GATKHC_13733:HG2_Ill_Krunchall_11807:HG2_Ill_SpiralSDKrefine_16056:HG2_Ill_manta_2399:HG2_Ill_svaba_10659:HG2_PB_assemblyticsfalcon_25092:HG3_Ill_150bpfermikitraw_10900:HG3_Ill_250bpfermikitraw_11187:HG3_Ill_Cortex_3491:HG3_Ill_GATKHCSBGrefine_5676:HG3_Ill_GATKHC_13722:HG3_Ill_Krunchall_11531:HG3_Ill_Spiral_9022:HG3_Ill_manta_1965:HG3_Ill_svaba_10757:HG4_Ill_150bpfermikitraw_11015:HG4_Ill_250bpfermikitraw_11483:HG4_Ill_Cortex_3465:HG4_Ill_GATKHCSBGrefine_5851:HG4_Ill_GATKHC_13790:HG4_Ill_Krunchall_12129:HG4_Ill_manta_2063:HG4_Ill_svaba_10768:HG4_PB_assemblyticsfalcon_24529;NumExactMatchSVs=28;ClusterMaxShiftDist=0.109091;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.185185;PBcalls=8;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=53;DistBack=4;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=7:84590422-84590424;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5056.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:26:0|1:20:4:1:26:./.:0:0:0:0:0/1:32:29:./.:.:.:.:.:.
chr7	84742932	HG4_Ill_MetaSV_4987	C	CAAAAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAATAA	20	PASS	ClusterIDs=HG2_PB_pbsv_8345:HG2_PB_SVrefine2Falcon1plusDovetail_11145:HG4_PB_HySA_12320:HG4_Ill_MetaSV_4987:HG2_Ill_GATKHCSBGrefine_5760:HG3_PB_SVrefine2Falcon1Dovetail_5052:HG4_PB_pbsv_8363;NumClusterSVs=7;ExactMatchIDs=HG4_Ill_MetaSV_4987;NumExactMatchSVs=1;ClusterMaxShiftDist=0.165017;ClusterMaxSizeDiff=0.158416;ClusterMaxEditDist=0.309148;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=307;DistBack=-60;DistForward=4;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=7:84742925-84742992;PctSeqSimilarity=0.9984;PctSizeSimilarity=1;PctRecOverlap=0.9739;SizeDiff=0;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=99;MatchId=5057.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:31:./.:14:19:15:9:./.:0:0:0:0:0/1:17:11:0/1:4:25:.:.:.
chr7	84901723	HG2_Ill_MetaSV_4764	C	CTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTCAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_8346:HG2_PB_assemblyticsfalcon_25097:HG4_Ill_MetaSV_4988:HG4_PB_pbsv_8364:HG3_PB_SVrefine2Falcon1Dovetail_5053:HG3_Ill_GATKHCSBGrefine_5677:HG2_Ill_MetaSV_4764:HG2_Ill_GATKHCSBGrefine_5761:HG3_PB_HySA_12763:HG2_PB_HySA_15300:HG3_PB_pbsv_8133;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5761:HG2_Ill_MetaSV_4764:HG3_Ill_GATKHCSBGrefine_5677;NumExactMatchSVs=3;ClusterMaxShiftDist=0.182495;ClusterMaxSizeDiff=0.182495;ClusterMaxEditDist=0.289377;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=248;DistBack=47295;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=7:84901724-84901725;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5058.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:24:./.:27:10:19:12:./.:0:0:0:0:0/1:26:8:./.:.:.:.:.:.
chr7	87009561	HG3_Ill_250bpfermikitraw_11206	T	TCCTATTTTATAAACCTGAAGTCAACTATATTGTCTTCTCTATATTGTAGGCTTTATTGTAAGGCTTTGCAGAGGGTGCATAGGAAGCATGTAAAAACTTTAGTTAATAATAACAATAGTTACTAATTATTGCTGTGAGCTAGATCCTTGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11148:HG3_PB_pbsv_8137:HG4_PB_HySA_12327:HG4_PB_pbsv_8367:HG2_PB_HySA_15313:HG2_PB_pbsv_8349:HG4_Ill_SVrefine2DISCOVARDovetail_6085:HG2_10X_SVrefine210Xhap12_5960:HG4_Ill_MetaSV_4992:HG3_Ill_250bpfermikitraw_11206:HG2_PB_SVrefine2PBcRplusDovetail_10356:HG2_PB_SVrefine2PB10Xhap12_6088:HG2_PB_SVrefine2Falcon2Bionano_4048:HG2_Ill_SVrefine2DISCOVARplusDovetail_12206:HG2_Ill_MetaSV_4766:HG2_Ill_250bpfermikitraw_11512:HG2_PB_PB10Xdip_29121:HG2_PB_PB10Xdip_29120;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11512:HG2_Ill_MetaSV_4766:HG2_Ill_SVrefine2DISCOVARplusDovetail_12206:HG2_PB_SVrefine2Falcon2Bionano_4048:HG2_PB_SVrefine2PB10Xhap12_6088:HG2_PB_SVrefine2PBcRplusDovetail_10356:HG3_Ill_250bpfermikitraw_11206:HG4_Ill_MetaSV_4992:HG4_Ill_SVrefine2DISCOVARDovetail_6085;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0774194;ClusterMaxSizeDiff=0.0774194;ClusterMaxEditDist=0.277419;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=150;DistBack=50517;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=150;REFWIDENED=7:87009562-87009711;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5059.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:1/1:0:35:1:21:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr7	87740144	HG2_Ill_GATKHCSBGrefine_5766	G	GCCTCCCAGGCTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTATAGGCACCTGCCACCATGGCTGGCTAATTTTGTATTTCACTTTGGGAGGCTGAGGCGGGTGGATCACCTGAGGTCAGGAGTTTGCGACCAGCCTGGCCAACCTGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGGGTGCCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAACCACTTGAGCCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCATGCCATTGTACTCCAGCCTGGGCAACAGAGCAAGACTCCGTGTCAAAAAAAAAAAAAAAACCCAAGGAAAAATAACTTTTAGGAGATTGCATAATAACTGGATCAGGAATAGAACTCAGAATCCTGCCTTAGTTATGTATTTTTATTTTTATTGTATTTTATTTTTGAGATGGAGTCTCGTTCTGTTGCCAGGTTGGAGTGTAGTGGCACGATCTCAGCTCACTGCAACCTCCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5058:HG4_PB_pbsv_8369:HG2_PB_HySA_15318:HG3_PB_pbsv_8140:HG4_PB_HySA_12332:HG4_Ill_MetaSV_4993:HG4_Ill_GATKHCSBGrefine_5856:HG3_Ill_MetaSV_4945:HG3_Ill_GATKHCSBGrefine_5682:HG2_Ill_GATKHCSBGrefine_5766:HG2_Ill_MetaSV_4768:HG2_PB_PB10Xdip_29127:HG2_PB_PB10Xdip_29126:HG2_PB_pbsv_8352:HG4_PB_SVrefine2Falcon1Dovetail_5080:HG4_PB_SVrefine2PBcRDovetail_4129:HG4_Ill_SVrefine2DISCOVARDovetail_6088:HG2_Ill_SVrefine2DISCOVARplusDovetail_12208:HG2_10X_SVrefine210Xhap12_5963:HG2_PB_SVrefine2PBcRplusDovetail_10359:HG2_PB_SVrefine2PB10Xhap12_6090:HG2_PB_SVrefine2Falcon1plusDovetail_11151:HG2_PB_SVrefine2Falcon2Bionano_4050;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5766:HG3_Ill_GATKHCSBGrefine_5682:HG3_Ill_MetaSV_4945:HG4_Ill_GATKHCSBGrefine_5856:HG4_Ill_MetaSV_4993;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0551471;ClusterMaxEditDist=0.277728;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=528;DistBack=-91;DistForward=51274;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=154;REFWIDENED=7:87740082-87740235;PctSeqSimilarity=0.9962;PctSizeSimilarity=0.9925;PctRecOverlap=0.9925;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5060.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:32:0:34:./.:0:0:0:0:1/1:1:32:1/1:4:80:.:.:.
chr7	88073429	HG2_PB_SVrefine2Falcon2Bionano_4052	T	TTACAGGCACCCACCACCACACCTGACTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCCACCTGCCTCAATCTCCCAAGGTGCTGGGATTACAGGTGTGAGCCACTGCGTCCAGCAGATAGTCTGTTCTTCCTGTGAAAAAGTATAGTAGGCCGGGCGCGGTAGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGTATAGTAACCTGGCAGCTGCTAGGATCCCCTCAATTCCAGGTATGTCTGATAAAAACCTGTTAGGATTCTTGATGTTTTTGAAATAAAGTGAGATATTTAAAAATAATTCAATTGCATAGCATGTATAAAATGTCTTTTGCAGTTTGAAGAGGTGCACACTAACACAAAGTCCTGATTTTTTTTTTTTTTTTTTGAGACGGAGTCTCAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11153:HG4_PB_pbsv_8371:HG2_PB_pbsv_8354:HG3_PB_pbsv_8142:HG2_PB_HySA_15323:HG3_Ill_MetaSV_4947:HG4_PB_HySA_12335:HG3_PB_HySA_12777:HG2_PB_PB10Xdip_29129:HG2_PB_PB10Xdip_29128:HG3_PB_SVrefine2Falcon1Dovetail_5060:HG4_PB_SVrefine2PBcRDovetail_4131:HG4_PB_SVrefine2Falcon1Dovetail_5082:HG2_PB_SVrefine2PBcRplusDovetail_10361:HG2_PB_SVrefine2PB10Xhap12_6092:HG2_PB_SVrefine2Falcon2Bionano_4052:HG2_10X_SVrefine210Xhap12_5966;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4052:HG2_PB_SVrefine2PB10Xhap12_6092:HG2_PB_SVrefine2PBcRplusDovetail_10361:HG4_PB_SVrefine2Falcon1Dovetail_5082:HG4_PB_SVrefine2PBcRDovetail_4131;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0509291;ClusterMaxSizeDiff=0.0481762;ClusterMaxEditDist=0.189573;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=715;DistBack=4183;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=155;REFWIDENED=7:88073430-88073584;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9986;PctRecOverlap=0.8364;SizeDiff=1;StartDistance=-117;EndDistance=-117;GTMatch=0;TruScore=94;MatchId=5062.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:71:./.:0:0:0:0:./.:0:0:0:0:1/1:0:16:./.:9:94:.:.:.
chr7	88380339	HG3_PB_SVrefine2Falcon1Dovetail_5062	T	TTTGCTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_12782:HG3_PB_pbsv_8145:HG2_PB_pbsv_8357:HG2_PB_assemblyticsfalcon_25117:HG2_Ill_MetaSV_4772:HG3_PB_SVrefine2Falcon1Dovetail_5062:HG2_PB_SVrefine2Falcon1plusDovetail_11155:HG2_PB_SVrefine2Falcon2Bionano_4054;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5062;NumExactMatchSVs=1;ClusterMaxShiftDist=0.129241;ClusterMaxSizeDiff=0.12601;ClusterMaxEditDist=0.161551;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=19226;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=7:88380340-88380351;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9937;PctRecOverlap=0.9937;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5063.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:21:0|1:32:1:1:23:./.:0:0:0:0:0/1:31:10:0/1:6:44:.:.:.
chr7	88516557	HG3_Ill_GATKHC_13754	G	GAAGTGTCTTTTCATGCCCTTTGCCCACTTTTTGATGGGCTTTTTTCATATACTTCTTAGCTGCATGTATGTCTTCTTTTGAA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12213:HG2_PB_pbsv_8359:HG4_Ill_svaba_10788:HG4_Ill_manta_2066:HG4_Ill_Krunchall_12157:HG4_Ill_GATKHC_13815:HG4_Ill_250bpfermikitraw_11504:HG4_Ill_150bpfermikitraw_11034:HG3_Ill_svaba_10776:HG3_Ill_manta_1970:HG3_Ill_Spiral_9043:HG3_Ill_Krunchall_11559:HG3_Ill_GATKHC_13754:HG3_Ill_250bpfermikitraw_11215:HG3_Ill_150bpfermikitraw_10922:HG2_Ill_svaba_10682:HG2_Ill_manta_2405:HG2_Ill_Krunchall_11839:HG2_Ill_GATKHC_13766:HG2_Ill_250bpfermikitraw_11522:HG2_Ill_150bpfermikitraw_10852:HG2_PB_PB10Xdip_29131:HG2_PB_PB10Xdip_29130:HG4_PB_pbsv_8375:HG3_PB_pbsv_8146:HG4_Ill_SVrefine2DISCOVARDovetail_6093:HG2_PB_SVrefine2PBcRplusDovetail_10363:HG2_PB_SVrefine2PB10Xhap12_6095:HG2_PB_SVrefine2Falcon2Bionano_4055:HG2_PB_SVrefine2Falcon1plusDovetail_11156;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10852:HG2_Ill_250bpfermikitraw_11522:HG2_Ill_GATKHC_13766:HG2_Ill_Krunchall_11839:HG2_Ill_manta_2405:HG2_Ill_svaba_10682:HG3_Ill_150bpfermikitraw_10922:HG3_Ill_250bpfermikitraw_11215:HG3_Ill_GATKHC_13754:HG3_Ill_Krunchall_11559:HG3_Ill_Spiral_9043:HG3_Ill_manta_1970:HG3_Ill_svaba_10776:HG4_Ill_150bpfermikitraw_11034:HG4_Ill_250bpfermikitraw_11504:HG4_Ill_GATKHC_13815:HG4_Ill_Krunchall_12157:HG4_Ill_manta_2066:HG4_Ill_svaba_10788;NumExactMatchSVs=19;ClusterMaxShiftDist=0.104651;ClusterMaxSizeDiff=0.0930233;ClusterMaxEditDist=0.24;PBcalls=9;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=82;DistBack=-46;DistForward=6;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=64;REFWIDENED=7:88516540-88516603;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5065.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:4:23:2:32:./.:0:0:0:0:1/1:1:50:./.:.:.:.:.:.
chr7	88790858	HG2_Ill_Krunchall_11840	T	TTGGCTTCATTTTATATGTATCTTTTACAGAGATGGGGTTTCATTATGTTACCCAGACTGGTCTCAAAGTCCTG	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_25119:HG3_PB_pbsv_8147:HG2_PB_HySA_15330:HG3_PB_HySA_12784:HG4_PB_pbsv_8376:HG4_PB_HySA_12339:HG2_PB_pbsv_8360:HG4_Ill_svaba_10790:HG4_Ill_Krunchall_12160:HG4_Ill_GATKHC_13818:HG4_Ill_GATKHCSBGrefine_5860:HG4_Ill_250bpfermikitraw_11507:HG3_Ill_svaba_10779:HG3_Ill_Krunchall_11562:HG3_Ill_GATKHC_13757:HG3_Ill_GATKHCSBGrefine_5686:HG3_Ill_250bpfermikitraw_11218:HG3_Ill_150bpfermikitraw_10925:HG2_Ill_svaba_10683:HG2_Ill_Krunchall_11840:HG2_Ill_GATKHC_13767:HG2_Ill_GATKHCSBGrefine_5770:HG2_Ill_250bpfermikitraw_11523;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11523:HG2_Ill_GATKHCSBGrefine_5770:HG2_Ill_GATKHC_13767:HG2_Ill_Krunchall_11840:HG2_Ill_svaba_10683:HG3_Ill_150bpfermikitraw_10925:HG3_Ill_250bpfermikitraw_11218:HG3_Ill_GATKHCSBGrefine_5686:HG3_Ill_GATKHC_13757:HG3_Ill_Krunchall_11562:HG3_Ill_svaba_10779:HG4_Ill_250bpfermikitraw_11507:HG4_Ill_GATKHCSBGrefine_5860:HG4_Ill_GATKHC_13818:HG4_Ill_Krunchall_12160:HG4_Ill_svaba_10790;NumExactMatchSVs=16;ClusterMaxShiftDist=0.10596;ClusterMaxSizeDiff=0.0927152;ClusterMaxEditDist=0.319444;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=58495;DistForward=72;DistMin=72;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=77;REFWIDENED=7:88790859-88790935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5066.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:38:0|1:41:3:3:33:./.:0:0:0:0:0/1:23:22:./.:.:.:.:.:.
chr7	89479785	HG4_Ill_SVrefine2DISCOVARDovetail_6098	A	AGTTAATTTTACAAAATCAGCATATTTCTTGTTTAAAAAGAGAAAGAATCACAATGTTGCTGGAAATCAATATATATATTGATATATATATATGTCTTGTTCTGTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5972:HG3_PB_HySA_12792:HG3_PB_pbsv_8150:HG4_Ill_manta_2067:HG4_PB_pbsv_8380:HG2_Ill_manta_2406:HG2_Ill_MetaSV_4774:HG2_Ill_GATKHC_13777:HG2_Ill_GATKHCSBGrefine_5773:HG4_Ill_MetaSV_4997:HG4_Ill_GATKHC_13829:HG4_Ill_GATKHCSBGrefine_5865:HG3_Ill_manta_1971:HG3_Ill_MetaSV_4949:HG3_Ill_GATKHC_13761:HG3_Ill_GATKHCSBGrefine_5687:HG2_PB_HySA_15340:HG2_PB_PB10Xdip_29134:HG2_PB_PB10Xdip_29133:HG2_Ill_breakscan11_3853:HG4_PB_assemblyticsfalcon_24557:HG4_PB_SVrefine2Falcon1Dovetail_5086:HG2_PB_pbsv_8362:HG4_PB_SVrefine2PBcRDovetail_4135:HG4_PB_HySA_12350:HG4_Ill_SVrefine2DISCOVARDovetail_6098:HG3_PB_SVrefine2Falcon1Dovetail_5066:HG2_PB_SVrefine2PBcRplusDovetail_10365:HG2_PB_SVrefine2PB10Xhap12_6097:HG2_PB_SVrefine2Falcon2Bionano_4058:HG2_PB_SVrefine2Falcon1plusDovetail_11159:HG2_Ill_SVrefine2DISCOVARplusDovetail_12217;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5972:HG4_PB_SVrefine2PBcRDovetail_4135:HG4_Ill_SVrefine2DISCOVARDovetail_6098:HG3_PB_SVrefine2Falcon1Dovetail_5066:HG2_PB_SVrefine2PBcRplusDovetail_10365:HG2_PB_SVrefine2PB10Xhap12_6097:HG2_PB_SVrefine2Falcon2Bionano_4058:HG2_PB_SVrefine2Falcon1plusDovetail_11159:HG2_Ill_SVrefine2DISCOVARplusDovetail_12217;NumExactMatchSVs=9;ClusterMaxShiftDist=0.110092;ClusterMaxSizeDiff=0.108597;ClusterMaxEditDist=0.337778;PBcalls=16;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=105;DistBack=71102;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=107;REFWIDENED=7:89479786-89479892;PctSeqSimilarity=0.9652;PctSizeSimilarity=0.9813;PctRecOverlap=0.243;SizeDiff=-2;StartDistance=-80;EndDistance=-80;GTMatch=0;TruScore=72;MatchId=5067.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:83:1/1:6:27:0:45:./.:0:0:0:0:1/1:2:32:./.:.:.:.:.:.
chr7	89621119	HG3_Ill_GATKHCSBGrefine_5689	C	CGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACTTGGACACAGGAAGGGGAACATCACACACCGGGGCCTGTTGTGGGGTGGGAGGAGGGGGGAGGGATAGCATTAGGAGATATACCTAATGTAAATGAAGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTACACATGTACCCTAGAACTTAAAGTATAATTAATAAATATATATATTTATTAATTATATATAACTATATATAGTTATATATAT	20	PASS	ClusterIDs=HG3_PB_pbsv_8154:HG2_PB_SVrefine2PB10Xhap12_6104:HG2_PB_pbsv_8367:HG2_PB_assemblyticsfalcon_25128:HG3_Ill_MetaSV_4951:HG3_Ill_GATKHCSBGrefine_5689:HG2_Ill_GATKHCSBGrefine_5778:HG2_10X_SVrefine210Xhap12_5975:HG3_PB_SVrefine2Falcon1Dovetail_5070:HG4_PB_assemblyticsfalcon_24562:HG2_PB_HySA_15344:HG3_PB_HySA_12795:HG2_PB_SVrefine2Falcon1plusDovetail_11162:HG4_PB_SVrefine2Falcon1Dovetail_5089;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5975:HG2_Ill_GATKHCSBGrefine_5778:HG3_Ill_GATKHCSBGrefine_5689:HG3_Ill_MetaSV_4951;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0732984;ClusterMaxSizeDiff=0.0732984;ClusterMaxEditDist=0.172297;PBcalls=10;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=286;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=7:89621120-89621119;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5068.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:37:./.:23:11:9:34:./.:0:0:0:0:0/1:28:16:./.:.:.:.:.:.
chr7	89830435	HG4_Ill_150bpfermikitraw_11046	T	TTATACATTTATATTTATACTATATATTTATACATTTATATATACTATATATGGTATAAATATATTTATACTATA	20	PASS	ClusterIDs=HG4_PB_pbsv_8387:HG2_PB_PB10Xdip_29149:HG3_PB_pbsv_8158:HG2_Ill_breakscan11_3854:HG4_Ill_svaba_10799:HG4_Ill_manta_2070:HG4_Ill_Krunchall_12173:HG4_Ill_GATKHC_13837:HG4_Ill_GATKHCSBGrefine_5871:HG4_Ill_Cortex_3472:HG4_Ill_250bpfermikitraw_11519:HG4_Ill_150bpfermikitraw_11046:HG3_Ill_svaba_10784:HG3_Ill_manta_1973:HG3_Ill_Spiral_9056:HG3_Ill_Krunchall_11570:HG3_Ill_GATKHC_13766:HG3_Ill_GATKHCSBGrefine_5691:HG3_Ill_Cortex_3493:HG3_Ill_250bpfermikitraw_11224:HG3_Ill_150bpfermikitraw_10930:HG2_PB_assemblyticsfalcon_25133:HG2_Ill_svaba_10690:HG2_Ill_manta_2409:HG2_Ill_SpiralSDKrefine_16081:HG2_Ill_Krunchall_11853:HG2_Ill_GATKHC_13786:HG2_Ill_GATKHCSBGrefine_5781:HG2_Ill_Cortex_8437:HG2_Ill_250bpfermikitraw_11535:HG2_Ill_150bpfermikitraw_10863:HG3_PB_HySA_12797:HG2_PB_pbsv_8370;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10863:HG2_Ill_250bpfermikitraw_11535:HG2_Ill_Cortex_8437:HG2_Ill_GATKHCSBGrefine_5781:HG2_Ill_GATKHC_13786:HG2_Ill_Krunchall_11853:HG2_Ill_SpiralSDKrefine_16081:HG2_Ill_manta_2409:HG2_Ill_svaba_10690:HG2_PB_assemblyticsfalcon_25133:HG3_Ill_150bpfermikitraw_10930:HG3_Ill_250bpfermikitraw_11224:HG3_Ill_Cortex_3493:HG3_Ill_GATKHCSBGrefine_5691:HG3_Ill_GATKHC_13766:HG3_Ill_Krunchall_11570:HG3_Ill_Spiral_9056:HG3_Ill_manta_1973:HG3_Ill_svaba_10784:HG4_Ill_150bpfermikitraw_11046:HG4_Ill_250bpfermikitraw_11519:HG4_Ill_Cortex_3472:HG4_Ill_GATKHCSBGrefine_5871:HG4_Ill_GATKHC_13837:HG4_Ill_Krunchall_12173:HG4_Ill_manta_2070:HG4_Ill_svaba_10799;NumExactMatchSVs=27;ClusterMaxShiftDist=0.116129;ClusterMaxSizeDiff=0.0903226;ClusterMaxEditDist=0.27673;PBcalls=6;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=0;DistForward=23;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=26;REFWIDENED=7:89830434-89830462;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5069.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:52:1/1:2:14:4:31:./.:0:0:0:0:1/1:0:57:./.:.:.:.:.:.
chr7	89973498	HG2_Ill_GATKHC_13787	G	GTATATATGTATATATGTGTATATATGTATATATGTATATATGTGTATATATGTA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_11536:HG3_Ill_Spiral_9057:HG4_PB_pbsv_8388:HG2_PB_HySA_15350:HG2_PB_PB10Xdip_29150:HG4_Ill_GATKHC_13838:HG3_Ill_GATKHC_13767:HG2_Ill_GATKHC_13787:HG4_Ill_Krunchall_12174:HG2_PB_pbsv_8371;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHC_13787:HG3_Ill_GATKHC_13767:HG4_Ill_GATKHC_13838;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0900901;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.353982;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=19;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=170;REFWIDENED=7:89973461-89973630;PctSeqSimilarity=0.9785;PctSizeSimilarity=1;PctRecOverlap=0.3091;SizeDiff=0;StartDistance=38;EndDistance=38;GTMatch=0;TruScore=76;MatchId=5070.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:35:./.:0:0:0:0:./.:0:0:0:0:0/1:5:21:./.:.:.:.:.:.
chr7	91030427	HG2_Ill_SVrefine2DISCOVARplusDovetail_12226	A	AAAGAAAGAAAGAAAGACAAAGAAGAAAGAAAGAAAGAAAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAATCAGCCAAGAAAGAAAGAAAGAAAGAAAATCAGCCAAGAAAGAAAAGGAAG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12226:HG2_PB_pbsv_8374;NumClusterSVs=2;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12226;NumExactMatchSVs=1;ClusterMaxShiftDist=0.05;ClusterMaxSizeDiff=0.05;ClusterMaxEditDist=0.158333;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=122;DistBack=63440;DistForward=77;DistMin=77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=140;REFWIDENED=7:91030428-91030567;PctSeqSimilarity=0.9815;PctSizeSimilarity=0.9836;PctRecOverlap=0.2276;SizeDiff=2;StartDistance=-94;EndDistance=-94;GTMatch=0;TruScore=73;MatchId=5071.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:25:./.:4:0:0:3:./.:0:0:0:0:0/1:11:18:./.:.:.:.:.:.
chr7	91751534	HG2_Ill_MetaSV_4780	G	GAAAGAAAAGCACAGATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3855:HG2_PB_HySA_15360:HG3_PB_SVrefine2Falcon1Dovetail_5074:HG2_PB_pbsv_8375:HG4_PB_pbsv_8391:HG4_Ill_MetaSV_5002:HG2_PB_assemblyticsfalcon_25147:HG4_Ill_GATKHCSBGrefine_5876:HG2_Ill_MetaSV_4780:HG4_PB_SVrefine2PBcRDovetail_4139:HG2_PB_SVrefine2Falcon1plusDovetail_11164:HG4_PB_HySA_12362;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_MetaSV_4780:HG4_Ill_GATKHCSBGrefine_5876:HG4_Ill_MetaSV_5002;NumExactMatchSVs=3;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.24374;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=-1;DistForward=13;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=7:91751535-91751552;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5072.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:22:0|1:32:2:1:20:./.:0:0:0:0:0/1:26:13:0/1:11:34:.:.:.
chr7	92181435	HG4_Ill_GATKHCSBGrefine_5877	T	TCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCCGACCTGCAAACTGCATATCTTTTAAAAAAATGTTACTGCATAGGCTGGATGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGCAAAACCCTGTCTCTATTAAAAACACAAAAATTAGCTGGATGTGGTGGCACATGCTTGTCATACCAGCTACTCTGGAGGCTGAGGCACGAGAATCCCTTAAATCTGGGAGGTGGAGGTTGCAGTAAGCTAAGATCGCACCACTGCACTCCAGCCTGGGCAACAGAGGGAGACTGTCTCAAAAAAAAAAAGATACTGTTAGCTTACTTAGCTCATTACTGGTTATTTCTCTCTCTCTCTTTTTTTTTTTTTGAGACAGTTTCACTCGTCACCCAGGCTGGAGTGCAATGGCACAATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGGGGTTCTCCTGACTCAGCCTCCCCAGCAGCTGGGATTACAGGCATGTGCCACCATGCCTTGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAAGTTAGTCTCAAACTCCTGATGTCAGGTGATCCACCTGCCTCAGCCTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11165:HG3_PB_pbsv_8165:HG2_PB_pbsv_8376:HG2_PB_HySA_15361:HG3_Ill_MetaSV_4956:HG4_Ill_MetaSV_5003:HG4_Ill_GATKHCSBGrefine_5877:HG3_Ill_GATKHCSBGrefine_5697:HG2_Ill_MetaSV_4781:HG2_Ill_GATKHCSBGrefine_5786:HG2_PB_PB10Xdip_29153:HG2_PB_PB10Xdip_29152:HG2_Ill_breakscan11_3856:HG4_PB_HySA_12364:HG4_PB_SVrefine2PBcRDovetail_4140:HG4_Ill_SVrefine2DISCOVARDovetail_6112:HG3_Ill_SVrefine2DISCOVARDovetail_6263:HG2_Ill_SVrefine2DISCOVARplusDovetail_12232:HG2_10X_SVrefine210Xhap12_5981:HG4_PB_SVrefine2Falcon1Dovetail_5093:HG3_PB_SVrefine2Falcon1Dovetail_5075:HG2_PB_SVrefine2Falcon2Bionano_4066:HG2_PB_SVrefine2PBcRplusDovetail_10375:HG2_PB_SVrefine2PB10Xhap12_6112;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5786:HG2_Ill_MetaSV_4781:HG3_Ill_GATKHCSBGrefine_5697:HG4_Ill_GATKHCSBGrefine_5877:HG4_Ill_MetaSV_5003;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0483163;ClusterMaxSizeDiff=0.0467153;ClusterMaxEditDist=0.189366;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=669;DistBack=-29;DistForward=10;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=282;REFWIDENED=7:92181186-92181467;PctSeqSimilarity=0.9911;PctSizeSimilarity=0.9824;PctRecOverlap=0.9824;SizeDiff=-12;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5073.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:19:0:35:./.:0:0:0:0:1/1:1:33:./.:7:103:.:604:.
chr7	92976834	HG2_PB_SVrefine2PB10Xhap12_6113	C	TTTGTTTTTTGGAGACAAGATCGTGCTCCGTCACTCAGGCTGGAGTGCAATGGCATGATCACAGCTCACTGCAGTCTTGACCTCCCAGGTTCAAGCGATCCATTCACCTTAGCCCCCTGAGTAGCTGAGTCTACAGTCACCTGCCACCACACCCAGCTAATTTTTTTTTTTTTTTTGAGATGGCATTTCCCTCTTGTCATCCAGGCTGGGGTGCAATGGTGTGATCTTGGCTCACTGCAACCTCTGCCTCCCGAGTTCAAGCGATTCTCCTGCCTCGAACTCCTGAGCAACACGCCCAGCTAATATTTAAAAATTTGTAGAGATAAGGGTCTCAGCTTGTTGCCCAGGATGGTCTTGAACTCCTAGGCTCAAGCCATCCTCCTGCCTCAGCCTCCTAAAGTGCTGGGA	20	PASS	ClusterIDs=HG4_PB_HySA_12367:HG2_PB_SVrefine2Falcon2Bionano_4067:HG3_PB_SVrefine2Falcon1Dovetail_5077:HG4_PB_SVrefine2PBcRDovetail_4142:HG4_PB_SVrefine2Falcon1Dovetail_5094:HG2_PB_assemblyticsfalcon_25150:HG2_PB_assemblyticsPBcR_24373:HG2_PB_SVrefine2PBcRplusDovetail_10377:HG2_PB_SVrefine2PB10Xhap12_6113:HG2_PB_SVrefine2Falcon1plusDovetail_11166:HG2_PB_pbsv_8377:HG3_PB_pbsv_8167:HG4_PB_pbsv_8393:HG3_PB_HySA_12806:HG4_Ill_GATKHCSBGrefine_5878:HG3_Ill_GATKHCSBGrefine_5700:HG2_Ill_GATKHCSBGrefine_5788:HG4_Ill_MetaSV_5004:HG2_Ill_MetaSV_4782:HG2_PB_HySA_15364;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11166:HG2_PB_SVrefine2PB10Xhap12_6113:HG2_PB_SVrefine2PBcRplusDovetail_10377:HG2_PB_assemblyticsPBcR_24373:HG2_PB_assemblyticsfalcon_25150:HG4_PB_SVrefine2Falcon1Dovetail_5094:HG4_PB_SVrefine2PBcRDovetail_4142;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0805861;ClusterMaxSizeDiff=0.0805861;ClusterMaxEditDist=0.151659;PBcalls=15;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=407;DistBack=-1;DistForward=16894;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:92976835-92976833;PctSeqSimilarity=0.9988;PctSizeSimilarity=1;PctRecOverlap=0.9951;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=5074.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:./.:8:15:1:27:./.:0:0:0:0:1/1:0:18:1/1:4:73:.:.:.
chr7	93034689	HG2_PB_SVrefine2Falcon2Bionano_4068	G	GTCTTTGATTCTGTTAATGGGACGAATCATATTTATTGACTTGCATATACTGAAACATTCTTGCATCCCTGGGATGAGTCCCAGCTGATCATTGTGAATGAGCATTTTAATGAGCTGCTGAGTTTGTATGCTGGTATTCTGTTGAGAAATTTTTCCTTTATGTCCAACAGGAATGTTGACCTACAGTTTTTTGTTGTTGTTGGGTCCTTTTCAGGTTTTGGTATCATGATAATGCTGGCATCATAGAATGGGTTTGGAAGAATTCTCTCTTCTTTAATTTTTTTTTCAAATAGTTTGCATAGGATTGGTATTAGTTCTTTAAATGCTTGGTAGAATTCAGTAGTGAAGCCATCAGGTCCTGAGCCTTTCTCTGATGGGAGAGACTTTTTATAACCCATCCAATCTTGTTACTAGTTAATCGTCTGTTCAGATTTTCCTTTTCTTCATGGTTTAATTATGGCAGGTTGTATGTGTCCAGAAATTTAATCATTTTTCCTACGTTTTCCAATATGTTAATGTTTATAATAGTCTTTTATGATCCTTTGTATTTCTGTGATATTGGTTGTAATGTCTGCTTTTAAATTCCTTATTTTATTTATTTGAATATTTTCTTTTTAAAGTTCGTTTAACTAAAAGTTTGTTGATTTTGTATATCTTTTTAAAAAACCAACTTTTCATTTTGTTAATTTTCTGTATTGTTTTTTAGTCTCAATTTCATTTATTTCTGCTCTGTTCTTTATTATTAATTCTTTATTATTTATTTCCTTCTACTAATTAATTAATTAGTTCTTTATTATTTCTTTCCTTCTACTAATTTTGGGTTTGCTTGGTTTCTCCTTTTCTAGATCCTTGAGTTGCTTCATTAGGTTGTTTATTTGAAATCTTTTTACTTTTTTGATATAGGCATTTATTGCTATGAAATTCTCTTTTGTACTAATTTTGCTGTATCCCATAGATTTTGGTATGTTGTATTTGCATTTTTGTGTATTTCCAGAAACTTTTGATATCCTCCTTAATTTCTTTATTGACCTATTGGTCATTCAGGAATATGTTTTTAAATTTCCTTGTGTTTATACAGTTTCAAAAGTTCCTCTTATTATTGATTTTTAGTTTTATCCCATTGTGGTCAGAAAGGATACTTGATATTATTTACATTTTAAAAACATGTTGAGACTTATTTTGTGGCCTAACATATAATCTATCCTGGAGAAATTTCCATGTGCTGATGAGAAGAATGTGGAATGTTCGCTAAATGTCTGTTAGGTCCATTTGATTTAGAGAGTAGTTTAAATTTGATGTCTCTTTGATGATTTTCTGTCAAGATGATGTGTTAATTGCTAAAAGTGAGGTGTTCAAATTCCCTACAATTATTTATCTCTTTTTATATCTAATAATATTTGCTTTATATATTTGGGTGTTCTGGTTTTGGGTGCATTTATATTTACAGTTGTATCCTTTTGCTAAATTGACTTCTTTATCATTATATAATAATTATATTTGCCTCTTTTTACTGTTTTTGATTTAAAGTCTATTTTATCGATATATGTATAGCTAGTCCTTTTCTATTTTGGTTTCCATTTGCATGTTATGTCATTTTCTCTTCCTTTAAGTCTATGTGTGTTTTTACAGGTTAACTGAGTGTCTTATAGACAGCATATAGTTGGGTCTTTTTAAATTTCAAATTCACCCACTCTCTGTCTTCTAATTGGATAATTTAATCCATTTTCATTCAACGATATTAACTCTTACCTTTCTGTTAATTGTTTTATGGTTATTTGGTAGACATTTTCCCCCTTTTTTTCTC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5078:HG2_PB_pbsv_8378:HG3_PB_pbsv_8168:HG2_PB_PB10Xdip_29156:HG2_PB_PB10Xdip_29155:HG3_PB_SVrefine2PBcRDovetail_3792:HG3_Ill_SVrefine2DISCOVARDovetail_6269:HG2_Ill_SVrefine2DISCOVARplusDovetail_12234:HG4_Ill_SVrefine2DISCOVARDovetail_6116:HG2_PB_SVrefine2PB10Xhap12_6114:HG2_PB_SVrefine2Falcon2Bionano_4068:HG2_PB_SVrefine2Falcon1plusDovetail_11167:HG2_10X_SVrefine210Xhap12_5985:HG2_PB_SVrefine2PBcRplusDovetail_10378:HG4_PB_SVrefine2Falcon1Dovetail_5095;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5985:HG2_PB_SVrefine2Falcon1plusDovetail_11167:HG2_PB_SVrefine2Falcon2Bionano_4068:HG2_PB_SVrefine2PB10Xhap12_6114:HG4_Ill_SVrefine2DISCOVARDovetail_6116;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0583311;ClusterMaxSizeDiff=0.057791;ClusterMaxEditDist=0.187533;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=1803;DistBack=2748;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=7:93034690-93034693;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5075.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:5:24:0:12:./.:0:0:0:0:1/1:0:49:./.:21:245:.:1719:.
chr7	93905040	HG2_Ill_Cortex_8443	A	AATTTCACCCTTATGAAATGGGTGAATATTTCATATGAAATATGAAAGGGT	20	PASS	ClusterIDs=HG2_PB_pbsv_8383:HG2_PB_assemblyticsfalcon_25155:HG2_Ill_breakscan11_3857:HG4_Ill_svaba_10813:HG4_Ill_Krunchall_12194:HG4_Ill_GATKHC_13859:HG4_Ill_GATKHCSBGrefine_5882:HG4_Ill_Cortex_3473:HG4_Ill_250bpfermikitraw_11535:HG4_Ill_150bpfermikitraw_11064:HG2_Ill_svaba_10708:HG2_Ill_SpiralSDKrefine_16093:HG2_Ill_Krunchall_11877:HG2_Ill_GATKHC_13812:HG2_Ill_GATKHCSBGrefine_5792:HG2_Ill_Cortex_8443:HG2_Ill_250bpfermikitraw_11559:HG2_Ill_150bpfermikitraw_10878:HG4_PB_HySA_12373:HG4_PB_pbsv_8397;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10878:HG2_Ill_250bpfermikitraw_11559:HG2_Ill_Cortex_8443:HG2_Ill_GATKHCSBGrefine_5792:HG2_Ill_GATKHC_13812:HG2_Ill_Krunchall_11877:HG2_Ill_SpiralSDKrefine_16093:HG2_Ill_svaba_10708:HG4_Ill_150bpfermikitraw_11064:HG4_Ill_250bpfermikitraw_11535:HG4_Ill_Cortex_3473:HG4_Ill_GATKHCSBGrefine_5882:HG4_Ill_GATKHC_13859:HG4_Ill_Krunchall_12194:HG4_Ill_svaba_10813;NumExactMatchSVs=15;ClusterMaxShiftDist=0.113208;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.218182;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=-1;DistForward=88325;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=7:93905039-93905042;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5076.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:21:0|1:38:2:1:19:./.:0:0:0:0:0/1:22:24:./.:.:.:.:.:.
chr7	94779049	HG2_Ill_breakscan11_3858	T	TAAGATATTTACATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5084:HG4_PB_pbsv_8398:HG2_PB_pbsv_8386:HG2_PB_HySA_15375:HG4_PB_HySA_12377:HG2_Ill_breakscan11_3858:HG2_PB_HySA_15374:HG4_PB_SVrefine2Falcon1Dovetail_5101:HG4_PB_SVrefine2PBcRDovetail_4146;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_breakscan11_3858;NumExactMatchSVs=1;ClusterMaxShiftDist=0.077961;ClusterMaxSizeDiff=0.0749625;ClusterMaxEditDist=0.189229;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=7:94779050-94779065;PctSeqSimilarity=0.9954;PctSizeSimilarity=0.9909;PctRecOverlap=0.9939;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5077.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:33:1|0:4:28:29:0:./.:0:0:0:0:0/1:20:9:0/1:6:32:.:.:.
chr7	96007507	HG2_PB_PB10Xdip_29224	A	AGAGGAGGGGAGGGGGGATGGGGGGAAGGGGGAGGGGGGGAAGGGGGAGGGGGAGAGGGGGGAGGGGGAGAGGGAGAGGGAGGGGGG	10	PASS	ClusterIDs=HG3_PB_pbsv_8179:HG4_PB_HySA_12388:HG2_PB_PB10Xdip_29225:HG2_PB_PB10Xdip_29224:HG3_PB_HySA_12821:HG4_PB_HySA_12387:HG2_PB_HySA_15384:HG2_PB_pbsv_8389:HG2_PB_assemblyticsPBcR_24393:HG2_PB_assemblyticsfalcon_25164;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_29224:HG2_PB_PB10Xdip_29225;NumExactMatchSVs=2;ClusterMaxShiftDist=0.331288;ClusterMaxSizeDiff=0.331288;ClusterMaxEditDist=0.331288;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=86;DistBack=3;DistForward=3869;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=7:96007488-96007510;PctSeqSimilarity=0.9831;PctSizeSimilarity=0.9663;PctRecOverlap=0.9775;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=5078.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:4:25:0:18:./.:0:0:0:0:./.:1:3:./.:.:.:.:.:.
chr7	96109113	HG2_Ill_SVrefine2DISCOVARplusDovetail_12248	A	ACTAAATAAGTATTTGATATCAAATACTCTAAATAAGTATTTGATATCAAATACTCTAAATAAGTATTTGATATCAAATACTCTAAATAAGTATTTGATATCAAATACTCTAAATAAGTATTTGATATCAAATACTCTAAATAAGTATTTGATATCAAATACTCTAAATAAGTATTTGATATCAAATACTCTAAATAAGTATTTGATATCAAATACT	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_6287:HG2_Ill_SVrefine2DISCOVARplusDovetail_12248:HG2_PB_pbsv_8391;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12248;NumExactMatchSVs=1;ClusterMaxShiftDist=0.169492;ClusterMaxSizeDiff=0.159806;ClusterMaxEditDist=0.208232;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=216;DistBack=-1;DistForward=164;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=0/0;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=180;REFWIDENED=7:96109114-96109293;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5079.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:32:./.:20:9:13:12:./.:0:0:0:0:0/1:9:4:./.:.:.:.:.:.
chr7	97067521	HG2_PB_SVrefine2Falcon2Bionano_4076	A	ACATTTATTACTATATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_15392:HG4_PB_pbsv_8411:HG2_PB_assemblyticsPBcR_24400:HG2_PB_assemblyticsfalcon_25172:HG2_Ill_breakscan11_3859:HG2_PB_pbsv_8393:HG4_Ill_MetaSV_5017:HG4_PB_SVrefine2PBcRDovetail_4152:HG4_Ill_GATKHCSBGrefine_5890:HG3_Ill_MetaSV_4969:HG3_Ill_GATKHCSBGrefine_5713:HG2_PB_SVrefine2PBcRplusDovetail_10386:HG2_PB_SVrefine2PB10Xhap12_6123:HG2_PB_SVrefine2Falcon2Bionano_4076:HG2_Ill_MetaSV_4789:HG2_Ill_GATKHCSBGrefine_5798:HG2_10X_SVrefine210Xhap12_6000:HG2_PB_SVrefine2Falcon1plusDovetail_11174:HG3_PB_SVrefine2Falcon1Dovetail_5092:HG4_PB_SVrefine2Falcon1Dovetail_5109:HG4_PB_HySA_12400:HG2_PB_PB10Xdip_29227:HG2_PB_PB10Xdip_29226;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6000:HG2_Ill_GATKHCSBGrefine_5798:HG2_Ill_MetaSV_4789:HG2_PB_SVrefine2Falcon2Bionano_4076:HG2_PB_SVrefine2PB10Xhap12_6123:HG2_PB_SVrefine2PBcRplusDovetail_10386:HG3_Ill_GATKHCSBGrefine_5713:HG3_Ill_MetaSV_4969:HG4_Ill_GATKHCSBGrefine_5890;NumExactMatchSVs=9;ClusterMaxShiftDist=0.14557;ClusterMaxSizeDiff=0.14557;ClusterMaxEditDist=0.240506;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=317;DistBack=34424;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=7:97067522-97067538;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5080.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:./.:0:3:0:8:./.:0:0:0:0:1/1:0:23:1/1:2:70:.:.:.
chr7	97872180	HG2_PB_SVrefine2PB10Xhap12_6127	C	CCACCTATCCATCTACCCATACACCCACCCACCCACTCACCCACCCATCCACACACCCATCCGCCCATCCACACACCCACCCACCCATCCATCCACACATCCACCCACACCCATCCATCCATCCACCCACCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCGCACACCCACCCATCTGTCCATCTGCACACACCTTCCATCCATCCACACATATACCCACCTATCCATCTACCCATGCACTCACCCACCCACTCACTCACCCATCCACACACCCACCCACACACCCATCCATCCACACACCCACCCACCCATCCATCCACACATCCACCCACACATCCATCCATCCACCCATCCATACATCCATCTGCACAACCACCCATCTGTCCATCTGCACATACCTTCCATTCATCCACACATACACCCACCCACCCACTCACCCACCCATCCACACACCCATCCACCCATCCACACACCCACCCACCCATCCATCCACACATCCACCCACACACCCATCCATCCATCCATCCGCACACCCACCCATCTGTCCATCTGCACACACCTTCCATCCATCCACACATATACCCACCTATCCATCTACCCATGCACCCACCCACCCACCCACTCACCCATCCACACACCCACCCACA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4155:HG4_PB_pbsv_8414:HG4_PB_HySA_12408:HG3_PB_pbsv_8187:HG2_PB_PB10Xdip_29230:HG2_PB_HySA_15401:HG2_PB_pbsv_8397:HG3_PB_SVrefine2Falcon1Dovetail_5093:HG4_PB_SVrefine2Falcon1Dovetail_5111:HG2_PB_SVrefine2PBcRplusDovetail_10389:HG2_PB_SVrefine2PB10Xhap12_6127:HG2_PB_SVrefine2Falcon2Bionano_4080:HG2_PB_SVrefine2Falcon1plusDovetail_11177;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6127:HG2_PB_SVrefine2PBcRplusDovetail_10389;NumExactMatchSVs=2;ClusterMaxShiftDist=0.193012;ClusterMaxSizeDiff=0.193012;ClusterMaxEditDist=0.282828;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=657;DistBack=7018;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=307;REFWIDENED=7:97872181-97872487;PctSeqSimilarity=0.9821;PctSizeSimilarity=0.9985;PctRecOverlap=0.8088;SizeDiff=-1;StartDistance=-125;EndDistance=-125;GTMatch=0;TruScore=92;MatchId=5081.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:38:./.:0:0:0:1:./.:0:0:0:0:./.:0:0:./.:3:39:.:721:.
chr7	98156316	HG4_Ill_GATKHC_13890	C	CTCTTTCTTTCTTTCTTTCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTT	10	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_5803:HG4_Ill_GATKHC_13890:HG4_Ill_GATKHCSBGrefine_5895:HG2_Ill_GATKHC_13842;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5803:HG4_Ill_GATKHC_13890:HG4_Ill_GATKHCSBGrefine_5895:HG2_Ill_GATKHC_13842;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=63;DistBack=14;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=7:98156315-98156320;PctSeqSimilarity=0.9402;PctSizeSimilarity=0.8182;PctRecOverlap=0.3117;SizeDiff=-14;StartDistance=46;EndDistance=46;GTMatch=0;TruScore=69;MatchId=5082.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:27:1/1:3:14:2:7:./.:0:0:0:0:1/1:1:20:./.:.:.:.:.:.
chr7	98197788	HG3_PB_SVrefine2Falcon1Dovetail_5097	C	CTTATTTTTCTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTAAGTAGAGACGGGGTTTCCCCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	10	PASS	ClusterIDs=HG4_PB_pbsv_8421:HG2_PB_pbsv_8405:HG3_PB_pbsv_8194:HG4_PB_SVrefine2Falcon1Dovetail_5114:HG3_PB_SVrefine2Falcon1Dovetail_5097:HG3_PB_HySA_12842:HG3_PB_SVrefine2PBcRDovetail_3798;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5097:HG4_PB_SVrefine2Falcon1Dovetail_5114;NumExactMatchSVs=2;ClusterMaxShiftDist=0.108883;ClusterMaxSizeDiff=0.108883;ClusterMaxEditDist=0.216596;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=329;DistBack=7631;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=183;REFWIDENED=7:98197789-98197971;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.991;PctRecOverlap=0.988;SizeDiff=-3;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=5083.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:17:0|1:30:2:0:20:./.:0:0:0:0:0/1:29:8:./.:5:37:.:.:.
chr7	98438243	HG2_PB_SVrefine2Falcon1plusDovetail_11182	A	AAGCTGGAAAATACAGCACAGTCTGGAGAGGGGGTCAGGGAGGAGGTGGGCAGCTCCCTCAGTCTCTCTTCACACCTCTTCCTATAGAATCTTCCATTCCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5100:HG4_PB_assemblyticsfalcon_24612:HG2_PB_PB10Xdip_29251:HG2_PB_HySA_15413:HG2_PB_pbsv_8407:HG4_PB_SVrefine2Falcon1Dovetail_5117:HG3_PB_pbsv_8196:HG3_Ill_GATKHCSBGrefine_5721:HG2_Ill_GATKHCSBGrefine_5807:HG3_PB_HySA_12844:HG3_PB_SVrefine2PBcRDovetail_3800:HG3_Ill_SVrefine2DISCOVARDovetail_6297:HG2_PB_SVrefine2PB10Xhap12_6131:HG2_PB_SVrefine2Falcon2Bionano_4085:HG2_PB_SVrefine2Falcon1plusDovetail_11182;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11182:HG2_PB_SVrefine2Falcon2Bionano_4085:HG2_PB_SVrefine2PB10Xhap12_6131:HG3_Ill_SVrefine2DISCOVARDovetail_6297:HG3_PB_SVrefine2PBcRDovetail_3800;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0784314;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.31068;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=100;DistBack=28983;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=190;REFWIDENED=7:98438244-98438433;PctSeqSimilarity=0.9934;PctSizeSimilarity=1;PctRecOverlap=0.495;SizeDiff=0;StartDistance=-51;EndDistance=-51;GTMatch=0;TruScore=82;MatchId=5084.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:19:./.:8:17:9:4:./.:0:0:0:0:0/1:23:6:./.:.:.:.:.:.
chr7	99146660	HG4_Ill_GATKHCSBGrefine_5899	C	CGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCTATGTTGGTCAGGGCTGGTCTCGAACTCCCGACCTCAGATGATCCGCCTGCTTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCTGGCCGATCTAGTCACTCTTATAAATGATCATCAAGGCCGGGCACGGTGGCTCACGCCTGTAACCCCAGCACTTTGGGAGGCTGAGGCAGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACATAGTGAAACACTGTCTCTACTAAAAATACAAAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTAGTCGCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGGAGGCAGACTTTGTAGTGAGCCGAGATTGGGCCACTGCACTCCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6008:HG2_PB_pbsv_8411:HG2_PB_assemblyticsfalcon_25196:HG3_PB_pbsv_8199:HG2_PB_assemblyticsPBcR_24424:HG2_Ill_breakscan11_3860:HG4_PB_pbsv_8422:HG4_PB_HySA_12424:HG4_PB_SVrefine2Falcon1Dovetail_5120:HG3_PB_SVrefine2Falcon1Dovetail_5102:HG4_PB_SVrefine2PBcRDovetail_4161:HG4_Ill_manta_2080:HG4_Ill_SVrefine2DISCOVARDovetail_6144:HG4_Ill_MetaSV_5019:HG4_Ill_GATKHCSBGrefine_5899:HG3_PB_SVrefine2PBcRDovetail_3802:HG3_Ill_SVrefine2DISCOVARDovetail_6300:HG3_Ill_MetaSV_4973:HG3_Ill_GATKHCSBGrefine_5723:HG2_PB_SVrefine2PBcRplusDovetail_10395:HG2_PB_SVrefine2Falcon2Bionano_4088:HG2_PB_SVrefine2Falcon1plusDovetail_11185:HG2_Ill_manta_2419:HG2_Ill_SVrefine2DISCOVARplusDovetail_12262:HG2_Ill_MetaSV_4793:HG2_Ill_GATKHCSBGrefine_5809;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6008:HG4_PB_SVrefine2PBcRDovetail_4161:HG4_Ill_manta_2080:HG4_Ill_SVrefine2DISCOVARDovetail_6144:HG4_Ill_MetaSV_5019:HG4_Ill_GATKHCSBGrefine_5899:HG3_PB_SVrefine2PBcRDovetail_3802:HG3_Ill_SVrefine2DISCOVARDovetail_6300:HG3_Ill_MetaSV_4973:HG3_Ill_GATKHCSBGrefine_5723:HG2_PB_SVrefine2PBcRplusDovetail_10395:HG2_PB_SVrefine2Falcon2Bionano_4088:HG2_PB_SVrefine2Falcon1plusDovetail_11185:HG2_Ill_manta_2419:HG2_Ill_SVrefine2DISCOVARplusDovetail_12262:HG2_Ill_MetaSV_4793:HG2_Ill_GATKHCSBGrefine_5809;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0616845;ClusterMaxSizeDiff=0.0616845;ClusterMaxEditDist=0.263403;PBcalls=13;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=415;DistBack=37303;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=7:99146661-99146666;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5085.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:0:9:1:11:./.:0:0:0:0:./.:0:6:1/1:3:73:.:.:.
chr7	99273267	HG2_PB_SVrefine2PB10Xhap12_6133	C	CTCTCCTCCCCACTCCTCTCCCCTCCCCCTCCCCTCTCCCCTCCCCCTTCCCCTCCCCTCCTCTCCTCTCCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCCTCCCCCCTCCCCTCCCCTCCTCCCCCCTCCCCTCCCCTCCTCCCCCCTCCCCTCCCCTCCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_10396:HG2_PB_assemblyticsfalcon_25197:HG2_PB_SVrefine2Falcon1plusDovetail_11186:HG2_PB_PB10Xdip_29255:HG2_PB_SVrefine2PB10Xhap12_6133:HG4_PB_pbsv_8423:HG3_PB_pbsv_8200:HG2_PB_HySA_15422:HG4_PB_HySA_12425:HG3_PB_SVrefine2PBcRDovetail_3803:HG4_PB_SVrefine2Falcon1Dovetail_5121:HG3_PB_SVrefine2Falcon1Dovetail_5103:HG4_PB_SVrefine2PBcRDovetail_4162:HG2_PB_SVrefine2Falcon2Bionano_4089;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6133;NumExactMatchSVs=1;ClusterMaxShiftDist=0.112994;ClusterMaxSizeDiff=0.112994;ClusterMaxEditDist=0.206704;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=186;DistBack=8;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=7:99273268-99273267;PctSeqSimilarity=0.9922;PctSizeSimilarity=0.9946;PctRecOverlap=0.9626;SizeDiff=1;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=98;MatchId=5086.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:./.:2:20:0:1:./.:0:0:0:0:./.:0:7:./.:.:.:.:.:.
chr7	100381429	HG2_Ill_GATKHCSBGrefine_5812	T	TATATATACATATATATACATATATATACATATATATATACGTATATATATACATATATATATACACATATATATACACATATATATACATATATATACACATATATATACACATATATATACATATATATATACAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3808:HG4_PB_SVrefine2Falcon1Dovetail_5123:HG4_Ill_GATKHCSBGrefine_5901:HG3_Ill_GATKHCSBGrefine_5724:HG2_Ill_GATKHCSBGrefine_5812:HG2_PB_PB10Xdip_26234:HG2_PB_SVrefine2Falcon1plusDovetail_11190:HG3_PB_pbsv_8204:HG3_PB_SVrefine2Falcon1Dovetail_5106:HG2_PB_pbsv_8417:HG2_PB_SVrefine2PBcRplusDovetail_10400:HG2_PB_SVrefine2PB10Xhap12_6137;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5812:HG3_Ill_GATKHCSBGrefine_5724;NumExactMatchSVs=2;ClusterMaxShiftDist=0.245161;ClusterMaxSizeDiff=0.245161;ClusterMaxEditDist=0.316129;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=136;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=71;REFWIDENED=7:100381386-100381456;PctSeqSimilarity=0.9065;PctSizeSimilarity=0.8553;PctRecOverlap=0.6541;SizeDiff=-23;StartDistance=44;EndDistance=44;GTMatch=0;TruScore=80;MatchId=5087.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:1:29:0:7:./.:0:0:0:0:./.:1:6:./.:.:.:.:.:.
chr7	100835239	HG3_Ill_GATKHCSBGrefine_5728	G	GGGAGGCCAAGGCAGGTAGATCGCTTGAGGCCAGGAATTAGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCCACAAAAAATACCAAAATTATCTGGGTGTGGTGGCACATCCCTGTAGTCCCAGCTACTCGGGAGGCTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCCGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGCAACAGAGCCAGACTCCGTCTTAAAAAAAAAGAACCCATGGATTGAAACATGTTTAATGTGTTTCAATCCAATGCAGTTGCCTTTTTTTTTTTTTTTTTCAGACGGAGTCTCGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCTTGCTTCAGCCTTCCGAGTAGCTGAGACTACAGGCGCACACCACCACACCCAGCTGATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCATCGCGCCCAGCCTGCTGTTGCCTTTCTTACTGATGCTCAAGTTATTTAATTTTTGGATAAATTGCTGTTTTAAAGCAATACAGAGGGCCAGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4168:HG2_PB_HySA_15433:HG3_PB_pbsv_8211:HG4_PB_HySA_12438:HG4_Ill_GATKHCSBGrefine_5905:HG3_Ill_MetaSV_4979:HG3_Ill_GATKHCSBGrefine_5728:HG2_Ill_manta_2422:HG2_Ill_MetaSV_4797:HG2_Ill_GATKHCSBGrefine_5816:HG4_Ill_MetaSV_5023:HG2_PB_PB10Xdip_26257:HG2_Ill_breakscan11_3862:HG2_PB_pbsv_8424:HG2_PB_HySA_15432:HG4_PB_SVrefine2Falcon1Dovetail_5125:HG4_Ill_SVrefine2DISCOVARDovetail_6150:HG3_Ill_SVrefine2DISCOVARDovetail_6305:HG2_Ill_SVrefine2DISCOVARplusDovetail_12266:HG3_PB_SVrefine2PBcRDovetail_3810:HG2_PB_SVrefine2PBcRplusDovetail_10402:HG2_PB_SVrefine2PB10Xhap12_6141:HG2_PB_SVrefine2Falcon2Bionano_4097:HG2_PB_SVrefine2Falcon1plusDovetail_11194:HG2_10X_SVrefine210Xhap12_6012:HG3_PB_SVrefine2Falcon1Dovetail_5111;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5816:HG2_Ill_MetaSV_4797:HG2_Ill_manta_2422:HG3_Ill_GATKHCSBGrefine_5728:HG3_Ill_MetaSV_4979:HG4_Ill_GATKHCSBGrefine_5905;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0552105;ClusterMaxSizeDiff=0.0538302;ClusterMaxEditDist=0.177387;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=719;DistBack=-62;DistForward=52;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=94;REFWIDENED=7:100835208-100835301;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5089.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:16:0:11:./.:0:0:0:0:1/1:0:26:1/1:7:132:.:.:.
chr7	101077450	HG4_Ill_250bpfermikitraw_11582	C	CCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_26259:HG2_PB_HySA_15437:HG3_PB_pbsv_8214:HG2_PB_pbsv_8427:HG4_PB_pbsv_8439:HG2_Ill_breakscan11_3863:HG4_PB_HySA_12440:HG4_Ill_GATKHC_13917:HG4_Ill_250bpfermikitraw_11582:HG3_Ill_GATKHC_13845:HG3_Ill_GATKHCSBGrefine_5730:HG2_Ill_manta_2424:HG2_Ill_Krunchall_11934:HG2_Ill_250bpfermikitraw_11612;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11612:HG2_Ill_Krunchall_11934:HG2_Ill_manta_2424:HG3_Ill_GATKHCSBGrefine_5730:HG3_Ill_GATKHC_13845:HG4_Ill_250bpfermikitraw_11582:HG4_Ill_GATKHC_13917;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0983607;ClusterMaxEditDist=0.186441;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=4608;DistForward=16574;DistMin=4608;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=91;REFWIDENED=7:101077451-101077541;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5090.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:36:1/1:1:4:2:11:./.:0:0:0:0:./.:2:15:./.:.:.:.:.:.
chr7	101360015	HG4_Ill_GATKHCSBGrefine_5910	A	ACCTGGGCAACAGAGCAAGACTCTGTCTCAAAAAAAAAACAAAGAGAGAAGGAGGCTGTCCTCCTCTCGACCACAGAGTTGGGTGGGTGGGTGGGAGACGATGTAATGAGAGGACGCAGGCCTCCTAGTCACAGGCCAGCTTCAGGACAAGGCCTCAGCTGAGCATGGTGGTTCCCGCCTTTAATCCCAGCACTTTAGAAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAGTTCAAGACCAGCCTCAGCAACATAGAAAGACCCCCATCTCTACAAAAAAATTTTTAAAAATTAGCCAGGCATGGTGGCACATGCCTGTAGTCCCAGCTACTCAGGAGGTGAGGCAGGAACATCTCTTGATCCCAGGAGGTCGAGGCTACAGTGAGCTGTGATCATGCCACTGCACTCCAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4102:HG2_PB_HySA_15442:HG2_PB_pbsv_8431:HG4_PB_pbsv_8443:HG2_Ill_breakscan11_3864:HG2_Ill_Spiral_597:HG3_Ill_MetaSV_4981:HG4_Ill_manta_2084:HG4_Ill_MetaSV_5025:HG4_Ill_GATKHCSBGrefine_5910:HG2_Ill_manta_2427:HG2_Ill_MetaSV_4799:HG4_PB_HySA_12447:HG3_Ill_manta_1987:HG2_Ill_GATKHCSBGrefine_5819:HG3_PB_pbsv_8218:HG3_PB_SVrefine2Falcon1Dovetail_5117:HG4_PB_SVrefine2PBcRDovetail_4172:HG4_Ill_SVrefine2DISCOVARDovetail_6156:HG2_PB_SVrefine2PBcRplusDovetail_10407:HG4_PB_SVrefine2Falcon1Dovetail_5128:HG3_PB_SVrefine2PBcRDovetail_3812:HG3_Ill_SVrefine2DISCOVARDovetail_6309:HG2_10X_SVrefine210Xhap12_6016:HG2_PB_SVrefine2Falcon1plusDovetail_11198;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_MetaSV_4799:HG2_Ill_manta_2427:HG4_Ill_GATKHCSBGrefine_5910:HG4_Ill_MetaSV_5025:HG4_Ill_manta_2084;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0733728;ClusterMaxSizeDiff=0.0733728;ClusterMaxEditDist=0.243309;PBcalls=12;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=412;DistBack=-20;DistForward=18;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=801;REFWIDENED=7:101369727-101360035;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5091.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:41:1/1:0:23:0:19:./.:0:0:0:0:1/1:0:23:1/1:3:46:.:.:.
chr7	101903490	HG2_PB_SVrefine2PB10Xhap12_6144	T	TCTCAGCCTCCCAAGTAGCTGGGACCACAGGTGTGCACCACCACGCCTGGCTAATTTTTTGCAGAGAAGGGGTTTCACCATGTTGCCCAGGCTGGTCTTGAACTCCTGAGCTCAGAAGATCCACCCACCTGGTTCTCCCAAAGTACTGGGATTATAGGAGTGAGCCACTGTGCCCGGCCTCCCCATGTGCTTCTAAAGTGAGATTTAATTAAGCAAAACTGCAGTTGCACCTGGTTTTGCAGGGCCAGCTTCAGAGGCAGAAAAAGAGTGAGATTTCATGTTCTGACTGCAATTGGGCGATGCCTCCATTCCAGGCAAATGGTTCAGCCTTGACCTTTCTCCCGTCCCTGCAGTTAAGTGGGTCTGAACAGAACCTTGTTCCTTGCTTTTGTTTTTGTTTGAGACAGAGTCTGTCTCTCTTGCCTAGGCTGGAGTTTAGTGGCGCGATCTCGGCTCACTGCAACCTCTGTCTCCTGAGTTCAAGCAATTCTCCTGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5119:HG3_PB_pbsv_8220:HG3_PB_HySA_12868:HG4_PB_pbsv_8445:HG2_PB_pbsv_8433:HG4_PB_HySA_12449:HG2_PB_PB10Xdip_26260:HG4_Ill_MetaSV_5028:HG4_Ill_GATKHCSBGrefine_5911:HG3_Ill_MetaSV_4982:HG3_Ill_GATKHCSBGrefine_5735:HG2_Ill_MetaSV_4800:HG2_Ill_GATKHCSBGrefine_5820:HG4_Ill_manta_2085:HG4_Ill_Spiral_695:HG3_Ill_Spiral_9110:HG2_Ill_Spiral_598:HG4_PB_SVrefine2Falcon1Dovetail_5130:HG4_PB_SVrefine2PBcRDovetail_4174:HG4_Ill_SVrefine2DISCOVARDovetail_6161:HG3_PB_SVrefine2PBcRDovetail_3813:HG3_Ill_SVrefine2DISCOVARDovetail_6310:HG2_PB_SVrefine2PBcRplusDovetail_10408:HG2_PB_SVrefine2PB10Xhap12_6144:HG2_PB_SVrefine2Falcon2Bionano_4103:HG2_PB_SVrefine2Falcon1plusDovetail_11199:HG2_Ill_SVrefine2DISCOVARplusDovetail_12274:HG2_10X_SVrefine210Xhap12_6021;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6021:HG2_Ill_SVrefine2DISCOVARplusDovetail_12274:HG2_PB_SVrefine2Falcon1plusDovetail_11199:HG2_PB_SVrefine2Falcon2Bionano_4103:HG2_PB_SVrefine2PB10Xhap12_6144:HG2_PB_SVrefine2PBcRplusDovetail_10408:HG3_Ill_SVrefine2DISCOVARDovetail_6310:HG3_PB_SVrefine2PBcRDovetail_3813:HG4_Ill_SVrefine2DISCOVARDovetail_6161:HG4_PB_SVrefine2PBcRDovetail_4174;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0740019;ClusterMaxSizeDiff=0.0720545;ClusterMaxEditDist=0.217186;PBcalls=14;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=495;DistBack=37398;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=178;REFWIDENED=7:101903491-101903668;PctSeqSimilarity=0.974;PctSizeSimilarity=0.9821;PctRecOverlap=0.7267;SizeDiff=-9;StartDistance=-133;EndDistance=-133;GTMatch=0;TruScore=89;MatchId=5092.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:45:1/1:0:16:0:31:./.:0:0:0:0:1/1:0:9:1/1:3:51:.:.:.
chr7	102019334	HG2_PB_SVrefine2Falcon1plusDovetail_11203	T	TAAAGAAACAAGGCACTGACAAAATTATATTCACAAACAGTTTAGATAATCATCTATCATAGATTATAAAATGACTATGTTTAATAAAATTTTAAAAATAAAAGAGGGAGAGAATGGGCTCAAAAAAAGAAATAAAAGGCTGGGCATGGTGGCTCGCACCTGTAATCCCAGCACTTTGGAAGGCCGAGACGGGCGGATCATGAGGTCAAGAGATCAAGACCATCCTGGCCAAAATGGTGAAACCCCGTCATTGCTAAAAATACAAAAATTAGTTGGGTGTGGTGGCATGCACCTGTAATCCAAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCATGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGCGTCACTGCACTCCAGCCTGGATGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAACTAACACACGGTACAACTGCATGTAAGGTGGA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4984:HG4_PB_pbsv_8448:HG2_PB_SVrefine2PB10Xhap12_6148:HG3_Ill_GATKHCSBGrefine_5741:HG2_Ill_GATKHCSBGrefine_5824:HG2_PB_SVrefine2Falcon2Bionano_4106:HG3_PB_SVrefine2Falcon1Dovetail_5123:HG3_Ill_SVrefine2DISCOVARDovetail_6315:HG3_PB_SVrefine2PBcRDovetail_3817:HG4_PB_SVrefine2PBcRDovetail_4176:HG2_PB_SVrefine2PBcRplusDovetail_10412:HG2_PB_SVrefine2Falcon1plusDovetail_11203:HG2_Ill_SVrefine2DISCOVARplusDovetail_12277:HG4_PB_SVrefine2Falcon1Dovetail_5132:HG2_PB_PB10Xdip_26262:HG2_PB_pbsv_8438;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12277:HG2_PB_SVrefine2Falcon1plusDovetail_11203:HG2_PB_SVrefine2PBcRplusDovetail_10412:HG4_PB_SVrefine2PBcRDovetail_4176;NumExactMatchSVs=4;ClusterMaxShiftDist=0.164972;ClusterMaxSizeDiff=0.155932;ClusterMaxEditDist=0.235028;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=463;DistBack=5226;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=7:102019335-102019339;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5093.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:0:23:0:17:./.:0:0:0:0:1/1:0:22:./.:5:65:.:.:.
chr7	102573007	HG2_Ill_GATKHCSBGrefine_5825	A	ATGATTTTTTTTTAGGTCAGACTTACATAAAATTTATAATGAATTATAAATAGAGAAGTAGAGGGCCAGAGAGGCTAAGTGACTAGCTCTGGGACCAGAGGCCAGTGCACAGCTTATAATCTCTCAGGGAAAAATGAGACAGCCAGGCTTTTCCTCCTATTCCATATATACATATGTATATATGTATACAAATAGCTAGATGGCAAAGTGCTTCACAACCAGTGCCCTGAATCTCAGCAGACAGTAAGTAAAACACCAAATCTGAGACAGAAGAGAAGCAGCTAGGGAGGCTACACAAACCAGTGATTGGGAGGAAGGCTTGAAGCAAAGAAAAGGGAAGGCATTCTAGGTGGAGACCCCATGAAGCAGGAAAACTCCAGGCAAGAGGGTGATTCTGGTGTTCAAGCTGTCACAACAAATAGAAAACACATTTGCTGCTCATAACCACATAGCCCCATGCTAATAACAACAGACATGTTAGTAGTTATAAATCCATTCTGAACATTTATTCCTTTGCCAAGAATGGACTGCATCCTAAGTGATATATGCAAACTAGAAATACTTTCAGAATCTTTAAAAAATGAAAAAAATTGTTAAAAATCTGCACACCCTGGAAGTCCTCAATAATATTTATTAAGGAGAAAATAGATTTCCCAAGCAATATAAGTTTACAAAATAAATGTTCT	20	PASS	ClusterIDs=HG2_PB_pbsv_8442:HG3_PB_pbsv_8231:HG2_PB_PB10Xdip_26270:HG4_PB_pbsv_8452:HG2_Ill_breakscan11_3865:HG4_Ill_svaba_10869:HG4_Ill_SVrefine2DISCOVARDovetail_6165:HG4_Ill_MetaSV_5031:HG4_Ill_GATKHCSBGrefine_5915:HG4_Ill_Cortex_3485:HG3_PB_SVrefine2PBcRDovetail_3819:HG3_Ill_svaba_10857:HG3_Ill_SVrefine2DISCOVARDovetail_6317:HG3_Ill_MetaSV_4987:HG3_Ill_GATKHCSBGrefine_5743:HG3_Ill_Cortex_3505:HG2_PB_SVrefine2PB10Xhap12_6151:HG2_PB_SVrefine2Falcon2Bionano_4107:HG2_Ill_svaba_10763:HG2_Ill_manta_2429:HG2_Ill_SVrefine2DISCOVARplusDovetail_12278:HG2_Ill_MetaSV_4804:HG2_Ill_GATKHCSBGrefine_5825:HG2_Ill_Cortex_8471:HG3_PB_SVrefine2Falcon1Dovetail_5126:HG4_PB_HySA_12463;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_Cortex_8471:HG2_Ill_GATKHCSBGrefine_5825:HG2_Ill_MetaSV_4804:HG2_Ill_SVrefine2DISCOVARplusDovetail_12278:HG2_Ill_manta_2429:HG2_Ill_svaba_10763:HG2_PB_SVrefine2Falcon2Bionano_4107:HG2_PB_SVrefine2PB10Xhap12_6151:HG3_Ill_Cortex_3505:HG3_Ill_GATKHCSBGrefine_5743:HG3_Ill_MetaSV_4987:HG3_Ill_SVrefine2DISCOVARDovetail_6317:HG3_Ill_svaba_10857:HG3_PB_SVrefine2PBcRDovetail_3819:HG4_Ill_Cortex_3485:HG4_Ill_GATKHCSBGrefine_5915:HG4_Ill_MetaSV_5031:HG4_Ill_SVrefine2DISCOVARDovetail_6165:HG4_Ill_svaba_10869;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0570207;ClusterMaxSizeDiff=0.0555952;ClusterMaxEditDist=0.241065;PBcalls=9;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=685;DistBack=17062;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:102573008-102573008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5095.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:77:./.:0:0:0:0:./.:0:0:0:0:1/1:0:25:./.:7:93:.:.:.
chr7	103889013	HG4_Ill_250bpfermikitraw_11604	A	ATCCTTTACAGACAAGCAAATGCTGAGGGATTTTGTCACCACCAGGCCTGCCTTACAAATGCTAAGGGTTTTTGTCACCACCAGGCCTTACACCAGGCCTG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4807:HG4_PB_pbsv_8458:HG4_PB_HySA_12475:HG4_Ill_svaba_10879:HG4_Ill_250bpfermikitraw_11604:HG4_Ill_150bpfermikitraw_11130:HG2_Ill_svaba_10773:HG2_Ill_Krunchall_11953:HG2_Ill_250bpfermikitraw_11630:HG2_Ill_150bpfermikitraw_10946:HG4_Ill_GATKHC_13943:HG4_Ill_GATKHCSBGrefine_5922:HG2_Ill_GATKHCSBGrefine_5832:HG4_Ill_SVrefine2DISCOVARDovetail_6170:HG2_PB_SVrefine2Falcon2Bionano_4112:HG2_Ill_SVrefine2DISCOVARplusDovetail_12288:HG2_10X_SVrefine210Xhap12_6030;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10946:HG2_Ill_250bpfermikitraw_11630:HG2_Ill_Krunchall_11953:HG2_Ill_svaba_10773:HG4_Ill_150bpfermikitraw_11130:HG4_Ill_250bpfermikitraw_11604:HG4_Ill_svaba_10879;NumExactMatchSVs=7;ClusterMaxShiftDist=0.164103;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.266667;PBcalls=3;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=100;DistBack=86912;DistForward=23;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=7:103889014-103889066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5096.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:0|1:42:0:0:24:./.:0:0:0:0:0/1:27:22:./.:.:.:.:.:.
chr7	104895573	HG2_10X_SVrefine210Xhap12_6036	T	TAAGATATGTAGAAAAAGGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGCAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11213:HG2_PB_HySA_15492:HG2_PB_pbsv_8457:HG4_PB_pbsv_8465:HG4_PB_assemblyticsfalcon_24660:HG3_PB_assemblyticsfalcon_25086:HG4_PB_HySA_12489:HG4_PB_SVrefine2PBcRDovetail_4186:HG4_PB_SVrefine2Falcon1Dovetail_5141:HG2_10X_SVrefine210Xhap12_6036:HG3_PB_SVrefine2Falcon1Dovetail_5137;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6036;NumExactMatchSVs=1;ClusterMaxShiftDist=0.157729;ClusterMaxSizeDiff=0.157729;ClusterMaxEditDist=0.201893;PBcalls=10;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=84276;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=7:104895574-104895589;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5097.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:23:0|1:25:0:0:19:./.:0:0:0:0:0/1:35:13:0/1:7:38:.:.:.
chr7	105084929	HG2_Ill_SVrefine2DISCOVARplusDovetail_12296	T	TAACAGCTATAGCAACACCTATAGCAACACCTATAGCAACACCTATAGCCTCCAACACCTATAGCAACACCTATAGCAACACCTATAGCAACACCTATAGCAAACACCTATAGCAACACCTATAGCCTCCAACACCTATAGCAACACCTATAGCAACACCTATAGCAACACCTATAGCAACACCTATAGCCTCCAACACCTATAGCAACACCTATAGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4120:HG3_PB_pbsv_8245:HG4_Ill_SVrefine2DISCOVARDovetail_6176:HG4_PB_pbsv_8468:HG2_Ill_SVrefine2DISCOVARplusDovetail_12296:HG2_PB_pbsv_8461;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12296:HG4_Ill_SVrefine2DISCOVARDovetail_6176;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0848214;ClusterMaxSizeDiff=0.0665189;ClusterMaxEditDist=0.259341;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=217;DistBack=-1;DistForward=17;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=104;REFWIDENED=7:105084930-105085033;PctSeqSimilarity=0.9888;PctSizeSimilarity=0.9819;PctRecOverlap=0.7783;SizeDiff=-4;StartDistance=-47;EndDistance=-47;GTMatch=0;TruScore=91;MatchId=5098.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:21:./.:7:21:24:3:./.:0:0:0:0:0/1:29:14:./.:.:.:.:.:.
chr7	105151770	HG2_10X_SVrefine210Xhap12_6041	G	CCGTGCCCGGCCGATTAACTAAATTTTAAGAATCCATATTTGATCTTACCCTGTTGTCCAAAATCATGAACAAAAAGAAAATAAAAAAACAAGTACATGCAAAAAGTAAAAGCAAAAAAGGATTATGACGGGAGGGTAAGTGAGCTGGGACCGCAGGGACAGTGTGCTTGCGTGGCTCACAGGTGTCAAGGAGCCCCTAAAATAGTTCAGGAAGTGGCCAAGGAGATGGACAAGGAAGACAAGACTTTCAAAGAGAATAAAAGAGGAGTAGAAGAAACTCCCTGGGCTAAAAGCGACAGGGAAGGGCCCCCTGGTCACAGGTGGTATTAAGAAATCCAGCAAAAAGCTAGCCGTTCCTTGTACTTGAGGCAAAGGTGACCCTTGGTTCCATTCCTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTCACCTAGGCCTGGAGTGCAGTGGTGGTGCGGTCTCGGCTCAACTGCAACCTCCGCCTCCTGGGTTCAAGATATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACGCCCGCCACTATGCCCAGCTTATTTTTTGTATTTTTAGTAGAGACGGGGCTTCACCATGTTGGCCAGGCTAGTCTCAAACTCCTGACCTCATGATTTGCCCGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4121:HG2_PB_SVrefine2PBcRplusDovetail_10429:HG3_PB_SVrefine2Falcon1Dovetail_5140:HG2_PB_SVrefine2PBcRplusDovetail_10428:HG2_10X_SVrefine210Xhap12_6041:HG3_PB_HySA_12910:HG3_PB_pbsv_8246:HG2_PB_PB10Xdip_26287:HG2_PB_pbsv_8462:HG3_Ill_MetaSV_4995:HG3_Ill_GATKHCSBGrefine_5757:HG2_Ill_MetaSV_4812:HG2_PB_HySA_15496:HG2_PB_SVrefine2Falcon1plusDovetail_11216:HG2_PB_SVrefine2PB10Xhap12_6166:HG3_PB_SVrefine2PBcRDovetail_3829;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6041:HG2_PB_SVrefine2PBcRplusDovetail_10428;NumExactMatchSVs=2;ClusterMaxShiftDist=0.102379;ClusterMaxSizeDiff=0.0994953;ClusterMaxEditDist=0.181556;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=689;DistBack=-9156;DistForward=0;DistMin=-9156;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=290;REFWIDENED=7:105151480-105151769;PctSeqSimilarity=0.9863;PctSizeSimilarity=0.9956;PctRecOverlap=0.7257;SizeDiff=3;StartDistance=188;EndDistance=188;GTMatch=0;TruScore=90;MatchId=5099.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:0|1:25:0:1:31:./.:0:0:0:0:0/1:26:7:0/1:17:46:.:.:.
chr7	105160925	HG2_Ill_SVrefine2DISCOVARplusDovetail_12298	T	TGCTGTGCAAGCTGAAATTCGAGCCCTCCTCGTCAGCCCTGCGCAGAGGTGTTTAGAAGCACACCTTCGTTGCCTGCCGAGTAGGGTTGGCAAAGAGTTTAGTTTTTCAAATATTTGGTCCCGTCAGACTACTTTTTTTTTCCATTCCAAAAATAAAGGGTTACTAAGGTTCCCCCCCATCCCCAAGCCTCTAATCATCTATGAAATGACTATGCCCCATTGGCCTGGGGGA	20	PASS	ClusterIDs=HG2_PB_pbsv_8464:HG3_Ill_Spiral_9122:HG3_PB_pbsv_8247:HG2_Ill_Spiral_602:HG2_PB_SVrefine2Falcon1plusDovetail_11218:HG3_Ill_SVrefine2DISCOVARDovetail_6331:HG3_Ill_GATKHCSBGrefine_5758:HG2_PB_SVrefine2PBcRplusDovetail_10431:HG2_PB_SVrefine2Falcon2Bionano_4123:HG2_Ill_SVrefine2DISCOVARplusDovetail_12298:HG2_Ill_GATKHCSBGrefine_5841:HG3_PB_SVrefine2Falcon1Dovetail_5142:HG2_PB_HySA_15497;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5841:HG2_Ill_SVrefine2DISCOVARplusDovetail_12298:HG2_PB_SVrefine2Falcon2Bionano_4123:HG2_PB_SVrefine2PBcRplusDovetail_10431:HG3_Ill_GATKHCSBGrefine_5758:HG3_Ill_SVrefine2DISCOVARDovetail_6331;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0807339;ClusterMaxSizeDiff=0.0807339;ClusterMaxEditDist=0.206316;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=231;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=7:105160926-105160935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:52:0|1:19:1:1:20:./.:0:0:0:0:0/1:25:14:./.:.:.:.:.:.
chr7	105466068	HG2_PB_HySA_15501	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGCGCCAGCTGAGTGCAGTGCGCGATCTCGCTCACTGCAAGCTCCGCTCCCGGTTCACGCCATTCTCCTGCCTCAGCCTCAGTAGCTGGACTACAGGCGCCGCCACCCGCCCGGCTAATTTTTGTATTTTAGTAGAGACGGTTAGCATG	20	PASS	ClusterIDs=HG4_PB_HySA_12494:HG2_PB_HySA_15501:HG2_PB_pbsv_8466:HG3_PB_assemblyticsfalcon_25094:HG4_PB_assemblyticsfalcon_24667:HG2_Ill_breakscan11_3866:HG4_PB_pbsv_8471:HG4_PB_SVrefine2PBcRDovetail_4191:HG4_Ill_MetaSV_5037:HG3_PB_SVrefine2Falcon1Dovetail_5145:HG4_PB_SVrefine2Falcon1Dovetail_5146:HG2_PB_SVrefine2PBcRplusDovetail_10433;NumClusterSVs=12;ExactMatchIDs=HG2_PB_HySA_15501;NumExactMatchSVs=1;ClusterMaxShiftDist=0.2049;ClusterMaxSizeDiff=0.200445;ClusterMaxEditDist=0.262806;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=205;DistBack=-3;DistForward=3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=7:105466061-105466071;PctSeqSimilarity=0.9427;PctSizeSimilarity=0.8874;PctRecOverlap=0.8874;SizeDiff=-26;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=90;MatchId=5101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:36:./.:14:10:10:21:./.:0:0:0:0:./.:28:3:./.:.:.:.:.:.
chr7	105564455	HG2_Ill_GATKHCSBGrefine_5844	T	TAAGACTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGCGAAGCGGAGCTTGCAGTGAGCCGAGATCCCGCCATTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3867:HG2_PB_HySA_15505:HG3_PB_pbsv_8252:HG4_PB_pbsv_8474:HG2_PB_pbsv_8468:HG2_PB_HySA_15504:HG4_PB_assemblyticsfalcon_24669:HG3_PB_assemblyticsfalcon_25097:HG4_PB_HySA_12496:HG4_PB_SVrefine2Falcon1Dovetail_5148:HG3_PB_SVrefine2Falcon1Dovetail_5148:HG2_PB_SVrefine2Falcon2Bionano_4126:HG3_Ill_MetaSV_4997:HG2_PB_SVrefine2PBcRplusDovetail_10435:HG2_PB_SVrefine2PB10Xhap12_6174:HG2_PB_SVrefine2Falcon1plusDovetail_11221:HG2_Ill_GATKHCSBGrefine_5844:HG2_10X_SVrefine210Xhap12_6044:HG4_PB_SVrefine2PBcRDovetail_4193:HG4_Ill_MetaSV_5038:HG4_Ill_GATKHCSBGrefine_5933:HG2_PB_PB10Xdip_26299;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6044:HG2_Ill_GATKHCSBGrefine_5844:HG2_PB_SVrefine2Falcon1plusDovetail_11221:HG2_PB_SVrefine2PB10Xhap12_6174:HG2_PB_SVrefine2PBcRplusDovetail_10435:HG3_Ill_MetaSV_4997;NumExactMatchSVs=6;ClusterMaxShiftDist=0.14897;ClusterMaxSizeDiff=0.14897;ClusterMaxEditDist=0.206022;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=314;DistBack=15233;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=7:105564456-105564472;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5102.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:70:1/1:0:14:0:26:./.:0:0:0:0:1/1:0:20:1/1:2:73:.:.:.
chr7	106412432	HG4_PB_SVrefine2Falcon1Dovetail_5152	AT	CATATAATATAATATATATATATTATATATATATCATATGATATATATAATATATATATTATATATATCATATGATATATATAATACATATATTATATATATATCATATAATATATATAATATATATATTATATATATCATATATATATATTATAATATATTATATATATCATATGATATATATATAATATATATATTATATATATCATATGATATATATATATATATATATTATATATATATCATATGATATATATAATACATATATTATATATATTCATATGATATATATAATACCTATATTATATATATATCATATGATATATATAATACCTATATTATATATATCATATGATATATATAATACATATATTATATATATATCATATGATATATATAATACATATATTATATATATCATATGATAGTATTATATATATCATATGATATATATAATACATATATTATATATATCATATGATATATATAATACATATATTATATATATCATATGATATATATATATATATATTATATATATATCATATGATATATATATAATACATATATTATATATATCATATGATATATATAATATATATTATATATATCATATGATATATATAATATATATATTATATATATCATATGATATATATATAATACATATATTATATATATCTATATGATATATATAATACATATATTATATATATCATATGATATATATATACATATATATATATATATCATATGATATATATAATACATATATTATATATATATCATATGATATATACATACATATATTATATATATATCATATAATATATATAATACATATATTATATATATATCATATAATATATATAATACATATATTATATATATATCATATTAATATATACAATAATATATTATATATATATCAAAATATATATATAATACATATATATATATATATTCATATAATATATAAATACATATATTATTAATATATAATTATATATAATACATTATATTATATATGATATCATATATATATATACATATATTATATATATATCATATATATATAATAAATATATATATATATAATATATATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4129:HG4_PB_assemblyticsfalcon_24678:HG4_PB_SVrefine2Falcon1Dovetail_5152:HG3_PB_pbsv_8255:HG2_PB_SVrefine2Falcon1plusDovetail_11224:HG3_PB_SVrefine2Falcon1Dovetail_5152;NumClusterSVs=6;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_5152:HG4_PB_assemblyticsfalcon_24678;NumExactMatchSVs=2;ClusterMaxShiftDist=0.04947;ClusterMaxSizeDiff=0.04947;ClusterMaxEditDist=0.109444;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1104;DistBack=-12;DistForward=22;DistMin=-12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=282;REFWIDENED=7:106412385-106412666;PctSeqSimilarity=0.9794;PctSizeSimilarity=0.9813;PctRecOverlap=0.9707;SizeDiff=-21;StartDistance=23;EndDistance=24;GTMatch=0;TruScore=97;MatchId=5103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:0|1:28:0:1:27:./.:0:0:0:0:0/1:30:7:0/1:40:57:.:1087:.
chr7	107738801	HG2_Ill_Krunchall_11980	A	ACATAGGGGTTGATGGACGCCCCCTCCCCGCCCTCCCACTATGGACTTACGCTGGCAGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3868:HG3_PB_assemblyticsfalcon_25116:HG4_PB_assemblyticsfalcon_24690:HG4_PB_HySA_12512:HG2_PB_pbsv_8482:HG4_Ill_svaba_10910:HG4_PB_pbsv_8485:HG4_Ill_manta_2093:HG4_Ill_Krunchall_12300:HG4_Ill_GATKHC_13977:HG4_Ill_GATKHCSBGrefine_5938:HG4_Ill_Cortex_3494:HG4_Ill_250bpfermikitraw_11630:HG4_Ill_150bpfermikitraw_11155:HG3_Ill_svaba_10894:HG3_Ill_manta_1996:HG3_Ill_Spiral_9144:HG3_Ill_Krunchall_11692:HG3_Ill_GATKHC_13904:HG3_Ill_GATKHCSBGrefine_5768:HG3_Ill_Cortex_3514:HG3_Ill_250bpfermikitraw_11345:HG3_Ill_150bpfermikitraw_11029:HG2_Ill_svaba_10806:HG2_Ill_manta_2440:HG2_Ill_SpiralSDKrefine_16164:HG2_Ill_Krunchall_11980:HG2_Ill_GATKHC_13935:HG2_Ill_GATKHCSBGrefine_5852:HG2_Ill_Cortex_8494:HG2_Ill_250bpfermikitraw_11657:HG2_Ill_150bpfermikitraw_10974:HG2_PB_HySA_15528:HG3_PB_pbsv_8264;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10974:HG2_Ill_250bpfermikitraw_11657:HG2_Ill_Cortex_8494:HG2_Ill_GATKHCSBGrefine_5852:HG2_Ill_GATKHC_13935:HG2_Ill_Krunchall_11980:HG2_Ill_SpiralSDKrefine_16164:HG2_Ill_manta_2440:HG2_Ill_svaba_10806:HG3_Ill_150bpfermikitraw_11029:HG3_Ill_250bpfermikitraw_11345:HG3_Ill_Cortex_3514:HG3_Ill_GATKHCSBGrefine_5768:HG3_Ill_GATKHC_13904:HG3_Ill_Krunchall_11692:HG3_Ill_Spiral_9144:HG3_Ill_manta_1996:HG3_Ill_svaba_10894:HG4_Ill_150bpfermikitraw_11155:HG4_Ill_250bpfermikitraw_11630:HG4_Ill_Cortex_3494:HG4_Ill_GATKHCSBGrefine_5938:HG4_Ill_GATKHC_13977:HG4_Ill_Krunchall_12300:HG4_Ill_manta_2093:HG4_Ill_svaba_10910;NumExactMatchSVs=26;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.368421;PBcalls=7;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=54776;DistForward=54;DistMin=54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=7:107738802-107738859;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5105.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:27:0|1:45:1:0:32:./.:0:0:0:0:0/1:15:20:./.:.:.:.:.:.
chr7	107804138	HG2_PB_SVrefine2Falcon1plusDovetail_11229	T	TGGTCATACCAGATGGGGTGGCACTAAAGAGAGGTCAAACGGGGGCAGGGAGTGGCGCTAATGAGCAGTCATACCAGGTGGGGTGGCGGTAATGAGAGGTCATACCGGGTGGGGTGGCGGTAATGAGAGGTCATACCGGGTGGGGTGGCGGTAATGAGAGGTCATACCGGGTGGGGTGGCGGTAATGAGAGGTCATACCGGGTGGGGTGGGGTAGTGAGAGGTCATACCGGGTGGGGTGGGGTAGTGAGAGGTCATACCGGGTGGGGTGGCGGTAATGAGAGGTCATACCAGGTGGGGTGGGGTAGTGAGAGGTCATACCGGGTGGGGTGGCGGTAATGAGAGGTCATACCGGGTGGGGTGGGGTAGTGAGAGGTCATACCGGGTGGGGTGGCGGTAATGAGAGGTCATACCAGGTGGGGTGGGGTAGTGAGAGGTCATACCGGGTGGGGTGGGGTAATGAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11229:HG3_PB_assemblyticsfalcon_25117:HG3_PB_pbsv_8265:HG3_PB_SVrefine2Falcon1Dovetail_5156:HG4_PB_pbsv_8486:HG2_PB_SVrefine2PB10Xhap12_6184:HG2_PB_SVrefine2PBcRplusDovetail_10442:HG2_PB_SVrefine2PB10Xhap12_6183:HG2_PB_SVrefine2Falcon2Bionano_4133;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11229:HG2_PB_SVrefine2PBcRplusDovetail_10442:HG2_PB_SVrefine2PB10Xhap12_6183:HG2_PB_SVrefine2Falcon2Bionano_4133;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0902935;ClusterMaxSizeDiff=0.0902935;ClusterMaxEditDist=0.241535;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=462;DistBack=59378;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=513;REFWIDENED=7:107804139-107804651;PctSeqSimilarity=0.9801;PctSizeSimilarity=0.987;PctRecOverlap=0.4104;SizeDiff=6;StartDistance=-270;EndDistance=-270;GTMatch=0;TruScore=79;MatchId=5106.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:2:16:0:9:./.:0:0:0:0:./.:0:1:0/1:3:12:.:.:.
chr7	107829262	HG3_PB_pbsv_8267	A	AAATAGGGAGGAGCCAAGATGGCCGAAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACCGCAGAAGACGGGTGATTCCCTGCATTTTCCATCTGAGGGTAGCGGGTTCCATCTCACTAGGGGAGTGCCAGACGAGTGGGGCGGCAGGCCCAGTGTGTGTGCGCACACGGTGCGCGAGCCTAAGCAGGGGCGGAGGCATTGCTCACCTGGGAAGCGCAAGGGGTCCAGGGAGTTCCCCTTTCCAAGTCAAAGAAAGGGGTTGACGGAGACGCACCTGGAAAATCGGGGTCACTCCCACCCGAATATTGCCGCTTTTTCAGAAACCGGCTTAAGAAACGGCGCACCACGAGACTATATATCCCACACCTGGCTCAGAGGTCCTACGCCACGGAATCTCGCATGATTGGCTAGCACAGCAGTTGAGATCAAACTGCAAGGGCGGCACGAGGCCTGGGGGAAGGGGCGCCTCACCATTGGCCCAGGCTAGCTTTTAAGGTTTACAAAGCAGCCTGGGAAAGCCTCGGAACTGGGGTGGAGCCCACCACCAGCTCAAGGAGGCCCTGCCTGCCTATGTAGGCTCACCTCTGGGGCAGGGCCACAGACAAGACAAAAAGACAGCAGTGAACCTCTGCAGACTTAAGTGGTCCTGTCTGACAGCTTTGAAGAGAGGAGTGGTTCTCCCAGCCACGCAAGCTGGAGATCTGAGAAACAGGGGCAGACCTGCTTCCTCAAGTGGGTCCCTAGGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCAGCAGGGGCACACTGACATCTCAACACGGCAGGTATTCCAACCAGACGCTGCAAGCTTGAGGTCCCTAGTCTGTTAGAAGGAAAACTTAACAACCCGAAAGGAACATCTTACACCGAACCCATTCTGTACATCACCAATCATCAAAGACCAAAAGTAGATAAAAACCCACAAAATGGGAAAACAGAACAAGAAAAAAACTGGAACTCTAAAAGAACACAGAGCGGCCTCTCTCCTCCAAAGGAAACGCAGTTCCTTACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTTGGACGAGTGAGAGAAGAAGGCTTCAGAGATCAAATTACTCTGAGCTACGGGAAAGGAACATTAAAACCAAAGGCCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAAGAATGTATAACTTAGAATAAACCAAATACAAGAGAAGTGCTTTAAAGGGGAGCTGATGGAGCTGAAAAACAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGGCCGATGCGATCAACTGGAAGAAAAGGGTTATCAGCATGGAAGATGAAATTAATGAAATGAGGCGAGAAAGGGAAGTTTTTAGAGAAAAAGAATAAAAAAGAAATTGAGCAAAGCCTCCAGAAATATGGGACTATGTGAAAAAGACCAAATCTACGTCTGATTGCGTGTACCTGAAGTGATGTGGAAGAATGGAAACCAAGTTGGAAAACACTCTGCAGGATAAATTATCCAGGGAGGAATTCCCAATCTAGCAAGCAGGGCAACGTTCAGATTCAGGAAATACAGAGAACGCCAACAAGATACTCCTTCGGAGAAGAGCAACTCCAAAGACACAATAATTGTCCGATTTCACCAAAGTTTGAAATGAAGGAAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTAAGCCTCAAAAGGAAAGCCATCAGACTAACAGCGGAATCTCTCGGGCAAGAAACCCTACAAGGGCAAGAAGAGAGTGGGGGCCAATATTCCACACATTCTTTTAAAAGAAAAGAAATTTTTCAACAGAATTTCATATATCCAGCCAAACTAAGCTTCCATAAGTGAAGGAGAAAATAAAAATACTTTATAGACAAGCAAAATGTGAGAGATTTTGTCACCAACCAGGCCCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTTAAACATGGAAAGGAACAACCGGTACCAAGCCGCTGCAAATCATGGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAAATAATGAGCAAAATCACCAGCTAAAATCATAATGACAGGATCCGAATTCAACACATAACAATATTAACCTTTAAATATAAATCGGACTAAATTCTGCAATTACAAAGACACAACTGGCAAGTTGATAAAGAGTCAAGGACCCATTCCAGTGTGCTGTTATTCAAGGAAACCCATCTCCGTGCAGAGACACACAAGGCTCAAAATAAAAGGATGGAGAAGATCTACTCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGATTACATAATGGTAAAAGGGATCATTCAACAAAGGAGCCTAACTATCCTAAATATTTAGCCACCCAATACAGGAGCACCCAGATTCATAAAGCAAAGTCCTCAGTGACCTAACCAAAGAGACTTAGACTCCCACACAGTTAATAATGGGAGACTTTAACAACCCCAGCTGTCAACATGTTAGACAGATCACGAGAACATAAAAAAGAAAGTCAACAAAGGATCCCAGGAATTGAACTCAGCTCTGCAACCAAGCAGACCTAATAGACATCTACAGAACTCTTCCACCCCAAATTCAACAGAATATACATTTTTCAGCACCACACCACAGCCTTATTTCCAAAATTGACCAACATAGTTGGAAGTAAAGCCTCTCCTCCAGCAAATTGTAAAGAAACAGAAATTATAACAAACTATCTCTCAGACACAGTGCAATCAACTAGAACTCAGGATTAAGAAATCTCACTCAAAGCCGCCTTCAACTACATGGAAACTGAACAACCTGCTCTGATGAACCTGAACTGGGGTACATAACGAATGAAGGCAGAAATAAAGATGTTTCTTTGAAAACCAACGGGGAGACAAAGGACATCACCACCATACCAGAATCTCTGGGAACGCATTCAAAGCAGTGTGTAGAAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGGATCCAAAACTGAACACCCTAACATCACAATTAAAAGAAACTAAGAAAAGCAAGAGCAACACATTCAAAAGCTAGCAGAAAGGAAGAAATAACTAAAAATCAGAGCAGAACTGAAAGAAATAGAGACACAAAAAACCTTTTCAAAAAATCAATGATTCAGGAGCTGGTTTTTTGAAGGATCAACAAAATTGATAGACTGCTAGCAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGAGCACAATAAAAAAATGATAAAAGGGATATCACCACCGATCCCAAGAAATACAACCTACCATCAGAGAATACTACAAACACCTCTACGCAATAACTAGAAAATCTAGAGAAATGGATAAATTCCTCGACAATACACTCTCCCAAGACTAACCAGGAAGAAGTTGAATCTCTGGGAATAGACCAATTAACAGGGTCTGAAATTGTGGCAATAAATCAAATAGTTTACCAACCAAAAAGAGTCCAGGACACAGATGGATTCACAGCGAATTCTACCAGAGGTCACAGGAGGAACTGGTAAACCATTCCTTTTCTTGGAACTATTCCAATTCATAGAAAAAAGAGGGAATCCCTCCCTAACTCATTTTAGGGAAGGCCAGCCCATCATTCTGATACAAAGGCTGGGCAGAGCCAACAAAAAAGAGAATTTTTAAGACGACAAAGTACCTTGATGAACATTGTGCAAAACATCCTCATAAAATATGGCAAACCGAATCCAGCAGCAACATCAAAAAGCTTATCCACCTATGATCAAGTGGGCTTCATTCCCTGGGGATGCAGGCTTGGTTCAATATACGCAAATCAATAAATGTAATCCAACATATAAACATGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAAAACCCTTCATGCTTAAAAACTCATCAATACATTAGGTATTGATGGGATGTATTTCAAATAATTAAGGAGCTATCTAATGACAAACCCACAGCCATATCAATACTGAACTGGGCAAAAACCTGGAAGCATTCCCTTTGAAAAACTGGCACAAGCAGGGATGGCCCTCCGTCTCACCACTCCTATTCAACATAGTGTTGGAGTTCCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGGAGGAAGTCAAATTGTCCCTGTTTGCGACGACCATGAATTGTTTATCTGAAAACCCCATCGTCTCAGCCCAAAATGCTTCCTTAAGCTGATAAGCAACTTCAGCAAAGTTTCTCAGATAAAAATCATGTACAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAACATGGGTTGAACTCCCTTACACAATTTGCTTCAAGAGAATAAAATACCTAGGAATCCAACCTTACAAGGGTGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTTCAATGAAAAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCAATGGGTAGGAAGAAATCAATATCGTGAAAATGGCCATAACTGCCCAAGGTAATTTACAGACTTCAATGCCATCCCCATTCAAGCTACAATGACTTTCTTCACAGAATGGAAAAAAAACTACTTAAAGTTTCATATAATGGAACCAAAAAGAGCCCGCATCGAGCCAAGTCCAATTCCTAAGCCAAAGAACAAGCTGGGAGGCATCACACTACCTTGATTCAAACTCATATTACAAGGCCTACAGTTAACCAAACAGCATGGTAGCTGTACCAAAACAGAGATATAGATCCATGGAACAGAACAGAGCCCTCAGAAATAAACCGCATATCTACAATATCTGATCTTTGACAAAACCTGAGAAAAACAAGCAATGGGGAAAGGATCCCTATTTAATAAATGGTGCTGGGAAAACTGGCAGCATATGTAGAAACGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACGCTAAAACAATAAAAACCCTAGAAGAAAACCTAGGCATTTACCATTCAGGACATAGAGCGTGGGCAAGGACTTCATGTCCAAAAACACCAAAAGCATGGCATACAAAAGCCCCAAAATTGACAAATGGGATCTAATTTAAACTAAAGAAGCTTCTTGCAACAGCAAAAGAAACTACCATCAGATGTGAAACAGGCAAACCTCAACATGGGAGAAAATTTTCGGCACTATCATTGACAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAACAAACAACCCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTAATCAAAGAAGACATTTATGCAGCAAAAAACACATTGAAGAAATGCTCATTCATCAACTGGCCATCAGAGAAATGCATCAAAAACCACTATGAAGACATCATGCTCACAACAGTTAGAATGGCAATCATTAAAAAAGTCAGGAAAACAACAGGTGGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTTACACTGTTTGGGTGGGACTGGTAAACTAATTCAACATTGTGGAAGTTCAGTGGTTGGGGCGATTCCTCAGGGATCTAGAACTAGAAAAACATTTGGACCCAGCGCATACATTACTGGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACATGTATGTTTTATTGCGGCACTATTCACAATAGGCAGACTTGGAACCACCCAAATGCCAACAATGATAGCTGGATTAAAGAAAATGTGGGCACATATAACATGGAATACTATGCAGCCCATAAAAAATGATGAGTTTTTCATATCCTTTGTTAGGGACATGGATGAATTGGAAACCATCATTCCTCAGTAACTATCGCAAGAACAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATTCACATGGACGGAAGGGAAATTATCACACTCTGGGGACTTGGGGTGGTGGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGGAGAGTATACCTAATGCTAGATTGGACAACATTAGTGGGTGCAGCGCACCAGATGGCAACATGTATACATATGTAATTAACCTGCACAATGTGCACATGGGTACCCTAAATACTTAGAGTATAATAAAAAAAATAAAAAATAAAATCATAAATAAATAAATAAATTTTTAGTGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3869:HG2_PB_pbsv_8485:HG4_PB_pbsv_8488:HG3_PB_pbsv_8267:HG2_PB_HySA_15530:HG3_PB_assemblyticsfalcon_25120:HG4_PB_HySA_12515:HG3_PB_SVrefine2Falcon1Dovetail_5158:HG2_PB_SVrefine2PBcRplusDovetail_10444:HG2_PB_SVrefine2PB10Xhap12_6186:HG2_PB_SVrefine2Falcon2Bionano_4135:HG2_PB_HySA_15529:HG2_PB_SVrefine2Falcon1plusDovetail_11231;NumClusterSVs=13;ExactMatchIDs=HG3_PB_pbsv_8267;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0416464;ClusterMaxSizeDiff=0.0416464;ClusterMaxEditDist=0.180564;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=6292;DistBack=0;DistForward=61605;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=7:107829249-107829266;PctSeqSimilarity=0.9566;PctSizeSimilarity=0.9644;PctRecOverlap=0.9644;SizeDiff=224;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=96;MatchId=5107.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:110:1/1:4:13:0:15:./.:0:0:0:0:1/1:1:23:1/1:0:70:.:6113:.
chr7	108325660	HG3_PB_HySA_12936	C	CACAAAAAAAAAAAAAAAAACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCCTTCTAGGGTTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGGCGGCATTATTTCTGAGGGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGACTGTGGTGGGGTCGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_10445:HG2_PB_SVrefine2PB10Xhap12_6187:HG3_PB_pbsv_8268:HG2_PB_pbsv_8486:HG3_PB_assemblyticsfalcon_25122:HG3_PB_HySA_12936:HG3_PB_SVrefine2Falcon1Dovetail_5159:HG3_PB_SVrefine2PBcRDovetail_3840:HG2_PB_HySA_15534:HG2_PB_SVrefine2Falcon2Bionano_4136;NumClusterSVs=10;ExactMatchIDs=HG3_PB_HySA_12936;NumExactMatchSVs=1;ClusterMaxShiftDist=0.12634;ClusterMaxSizeDiff=0.12634;ClusterMaxEditDist=0.177642;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1337;DistBack=-1;DistForward=7171;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:108325661-108325661;PctSeqSimilarity=0.9963;PctSizeSimilarity=0.9985;PctRecOverlap=0.9985;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:1|0:1:30:26:2:./.:0:0:0:0:0/1:16:6:0/1:54:117:.:1327:.
chr7	108551210	HG3_PB_SVrefine2Falcon1Dovetail_5162	C	CAAAATAGCAGTGACGCCGGCGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAATTAGCCGGGCATGGTGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_12519:HG2_PB_pbsv_8490:HG2_PB_SVrefine2Falcon1plusDovetail_11233:HG3_PB_pbsv_8271:HG3_PB_assemblyticsfalcon_25126:HG4_PB_assemblyticsfalcon_24695:HG4_PB_pbsv_8491:HG3_PB_SVrefine2Falcon1Dovetail_5162:HG2_PB_SVrefine2PB10Xhap12_6190:HG2_10X_SVrefine210Xhap12_6055:HG4_PB_SVrefine2Falcon1Dovetail_5159:HG3_PB_HySA_12940:HG2_PB_HySA_15538;NumClusterSVs=13;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5162;NumExactMatchSVs=1;ClusterMaxShiftDist=0.157973;ClusterMaxSizeDiff=0.157973;ClusterMaxEditDist=0.223926;PBcalls=12;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=328;DistBack=-15;DistForward=-1;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=7:108551211-108551224;PctSeqSimilarity=0.9954;PctSizeSimilarity=0.997;PctRecOverlap=0.9939;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:76:./.:4:7:1:10:./.:0:0:0:0:1/1:0:22:1/1:1:54:.:.:.
chr7	108657083	HG2_Ill_manta_2444	A	AGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTTGCTTTTGTTGCAATT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10984:HG3_PB_pbsv_8272:HG4_PB_assemblyticsfalcon_24697:HG2_PB_HySA_15539:HG3_PB_HySA_12942:HG2_PB_pbsv_8491:HG4_PB_HySA_12521:HG4_PB_pbsv_8492:HG4_PB_SVrefine2PBcRDovetail_4203:HG4_PB_SVrefine2Falcon1Dovetail_5160:HG4_Ill_svaba_10920:HG4_Ill_scalpel_8054:HG4_Ill_manta_2096:HG4_Ill_SVrefine2DISCOVARDovetail_6194:HG4_Ill_Krunchall_12310:HG4_Ill_GATKHC_13988:HG4_Ill_GATKHCSBGrefine_5942:HG4_Ill_FB_7635:HG4_Ill_250bpfermikitraw_11638:HG4_Ill_150bpfermikitraw_11163:HG3_PB_assemblyticsfalcon_25128:HG3_Ill_svaba_10902:HG3_Ill_scalpel_8373:HG3_Ill_manta_1999:HG3_Ill_Spiral_9152:HG3_Ill_SVrefine2DISCOVARDovetail_6350:HG3_Ill_Krunchall_11702:HG3_Ill_GATKHC_13914:HG3_Ill_GATKHCSBGrefine_5773:HG3_Ill_FB_7565:HG3_Ill_250bpfermikitraw_11353:HG3_Ill_150bpfermikitraw_11037:HG2_Ill_svaba_10815:HG2_Ill_manta_2444:HG2_Ill_Krunchall_11991:HG2_Ill_GATKHC_13948:HG2_Ill_GATKHCSBGrefine_5857:HG2_Ill_250bpfermikitraw_11667;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10984:HG4_PB_SVrefine2PBcRDovetail_4203:HG4_PB_SVrefine2Falcon1Dovetail_5160:HG4_Ill_svaba_10920:HG4_Ill_scalpel_8054:HG4_Ill_manta_2096:HG4_Ill_SVrefine2DISCOVARDovetail_6194:HG4_Ill_Krunchall_12310:HG4_Ill_GATKHC_13988:HG4_Ill_GATKHCSBGrefine_5942:HG4_Ill_FB_7635:HG4_Ill_250bpfermikitraw_11638:HG4_Ill_150bpfermikitraw_11163:HG3_PB_assemblyticsfalcon_25128:HG3_Ill_svaba_10902:HG3_Ill_scalpel_8373:HG3_Ill_manta_1999:HG3_Ill_Spiral_9152:HG3_Ill_SVrefine2DISCOVARDovetail_6350:HG3_Ill_Krunchall_11702:HG3_Ill_GATKHC_13914:HG3_Ill_GATKHCSBGrefine_5773:HG3_Ill_FB_7565:HG3_Ill_250bpfermikitraw_11353:HG3_Ill_150bpfermikitraw_11037:HG2_Ill_svaba_10815:HG2_Ill_manta_2444:HG2_Ill_Krunchall_11991:HG2_Ill_GATKHC_13948:HG2_Ill_GATKHCSBGrefine_5857:HG2_Ill_250bpfermikitraw_11667;NumExactMatchSVs=31;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.169811;PBcalls=10;Illcalls=28;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=28;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=14;HG4count=15;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=48472;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=7:108657084-108657086;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5110.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:3:14:0:17:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr7	109283338	HG2_Ill_GATKHCSBGrefine_5860	T	TAAAAGACCATTAGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_15545:HG4_PB_pbsv_8495:HG2_PB_pbsv_8494:HG4_PB_HySA_12528:HG4_Ill_MetaSV_5044:HG2_PB_SVrefine2Falcon1plusDovetail_11236:HG2_Ill_GATKHCSBGrefine_5860;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5860:HG2_PB_SVrefine2Falcon1plusDovetail_11236;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0534918;ClusterMaxSizeDiff=0.0505201;ClusterMaxEditDist=0.132743;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=332;DistBack=47;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=7:109283339-109283352;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:35:0|1:33:1:0:31:./.:0:0:0:0:0/1:21:11:0/1:7:36:.:.:.
chr7	110835823	HG3_Ill_150bpfermikitraw_11061	A	AAATATGAAATTTATTAAAACCAACACAAAAATTTATCTGAAATCTCTTTAAACCTGGAAATATTCCAGAGAAACTTTTTGCATTGGTTTTAATGAATTTCATATTTTTCATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11238:HG2_PB_pbsv_8499:HG2_PB_PB10Xdip_26328:HG3_PB_pbsv_8282:HG4_PB_pbsv_8499:HG2_Ill_breakscan11_3870:HG4_PB_assemblyticsfalcon_24709:HG3_PB_assemblyticsfalcon_25141:HG4_PB_SVrefine2PBcRDovetail_4209:HG4_PB_SVrefine2Falcon1Dovetail_5166:HG4_Ill_svaba_10937:HG4_Ill_manta_2099:HG4_Ill_SVrefine2DISCOVARDovetail_6201:HG4_Ill_MetaSV_5047:HG4_Ill_GATKHCSBGrefine_5945:HG4_Ill_Cortex_3503:HG4_Ill_250bpfermikitraw_11654:HG4_Ill_150bpfermikitraw_11178:HG3_PB_SVrefine2Falcon1Dovetail_5166:HG3_Ill_svaba_10928:HG3_Ill_manta_2003:HG3_Ill_Spiral_9170:HG3_Ill_SVrefine2DISCOVARDovetail_6356:HG3_Ill_MetaSV_5003:HG3_Ill_GATKHCSBGrefine_5778:HG3_Ill_Cortex_3522:HG3_Ill_250bpfermikitraw_11375:HG3_Ill_150bpfermikitraw_11061:HG2_PB_SVrefine2PB10Xhap12_6197:HG2_Ill_svaba_10836:HG2_Ill_manta_2446:HG2_Ill_SpiralSDKrefine_16181:HG2_Ill_SVrefine2DISCOVARplusDovetail_12323:HG2_Ill_MetaSV_4821:HG2_Ill_GATKHCSBGrefine_5861:HG2_Ill_Cortex_8508:HG2_Ill_250bpfermikitraw_11692:HG2_Ill_150bpfermikitraw_11004:HG2_10X_SVrefine210Xhap12_6062;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6062:HG2_Ill_150bpfermikitraw_11004:HG2_Ill_250bpfermikitraw_11692:HG2_Ill_Cortex_8508:HG2_Ill_GATKHCSBGrefine_5861:HG2_Ill_MetaSV_4821:HG2_Ill_SVrefine2DISCOVARplusDovetail_12323:HG2_Ill_SpiralSDKrefine_16181:HG2_Ill_manta_2446:HG2_Ill_svaba_10836:HG2_PB_SVrefine2PB10Xhap12_6197:HG3_Ill_150bpfermikitraw_11061:HG3_Ill_250bpfermikitraw_11375:HG3_Ill_Cortex_3522:HG3_Ill_GATKHCSBGrefine_5778:HG3_Ill_MetaSV_5003:HG3_Ill_SVrefine2DISCOVARDovetail_6356:HG3_Ill_Spiral_9170:HG3_Ill_manta_2003:HG3_Ill_svaba_10928:HG3_PB_SVrefine2Falcon1Dovetail_5166:HG4_Ill_150bpfermikitraw_11178:HG4_Ill_250bpfermikitraw_11654:HG4_Ill_Cortex_3503:HG4_Ill_GATKHCSBGrefine_5945:HG4_Ill_MetaSV_5047:HG4_Ill_SVrefine2DISCOVARDovetail_6201:HG4_Ill_manta_2099:HG4_Ill_svaba_10937:HG4_PB_SVrefine2Falcon1Dovetail_5166:HG4_PB_SVrefine2PBcRDovetail_4209;NumExactMatchSVs=31;ClusterMaxShiftDist=0.180995;ClusterMaxSizeDiff=0.180995;ClusterMaxEditDist=0.246575;PBcalls=11;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=112;DistBack=31338;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=7:110835824-110835831;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:0:17:1:18:./.:0:0:0:0:1/1:0:59:./.:.:.:.:.:.
chr7	111878836	HG2_Ill_GATKHCSBGrefine_5862	T	TGATATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_8500:HG3_PB_HySA_12956:HG3_PB_pbsv_8283:HG4_PB_HySA_12536:HG4_PB_pbsv_8500:HG2_PB_HySA_15558:HG4_PB_assemblyticsfalcon_24714:HG2_PB_assemblyticsfalcon_25301:HG4_PB_SVrefine2Falcon1Dovetail_5167:HG3_PB_SVrefine2Falcon1Dovetail_5167:HG4_Ill_MetaSV_5048:HG4_Ill_GATKHCSBGrefine_5946:HG3_Ill_MetaSV_5004:HG3_Ill_GATKHCSBGrefine_5779:HG2_PB_SVrefine2PBcRplusDovetail_10446:HG2_PB_SVrefine2PB10Xhap12_6198:HG2_PB_SVrefine2Falcon1plusDovetail_11239:HG2_Ill_GATKHCSBGrefine_5862:HG2_PB_HySA_15557:HG2_PB_PB10Xdip_26329;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5862:HG2_PB_SVrefine2Falcon1plusDovetail_11239:HG2_PB_SVrefine2PB10Xhap12_6198:HG2_PB_SVrefine2PBcRplusDovetail_10446:HG3_Ill_GATKHCSBGrefine_5779:HG3_Ill_MetaSV_5004:HG4_Ill_GATKHCSBGrefine_5946:HG4_Ill_MetaSV_5048;NumExactMatchSVs=8;ClusterMaxShiftDist=0.24183;ClusterMaxSizeDiff=0.24183;ClusterMaxEditDist=0.317355;PBcalls=15;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=312;DistBack=6718;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=30;REFWIDENED=7:111878837-111878866;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5114.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:1:23:0:19:./.:0:0:0:0:1/1:0:14:1/1:2:73:.:.:.
chr7	112616713	HG2_PB_pbsv_8503	A	AAATATATATGATATACATGTATATGCATATATAGATATACATGTATATAATCATATATATGATATACATGTAATATCATATATATGAATATACATGTATATCATATATATGATATACATGT	10	PASS	ClusterIDs=HG4_PB_pbsv_8504:HG2_PB_pbsv_8503:HG4_PB_assemblyticsfalcon_24720:HG4_PB_SVrefine2Falcon1Dovetail_5170;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_8503;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0912863;ClusterMaxSizeDiff=0.0912863;ClusterMaxEditDist=0.240664;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=121;DistBack=14;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=86;REFWIDENED=7:112616690-112616775;PctSeqSimilarity=0.9516;PctSizeSimilarity=0.9504;PctRecOverlap=0.9339;SizeDiff=6;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=94;MatchId=5115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:28:./.:32:16:1:3:./.:0:0:0:0:0/1:35:8:./.:.:.:.:.:.
chr7	112979621	HG3_Ill_Cortex_3523	A	ATTTCTTTCTTTTTCACTAATTGGCGGGCTCCTTCTGTAAGTATTTTCAGAATAGAGTGTTTATTTTAAAACTAGTTGAGTAAAATCATTTGTGACGTTCATTTTTATTTATCCTAACAATGCATGGAGACAAATAGATGAAATAACTATATTTCTAAATGATCTGTCCCCTTCACCATCTCCAATCACAGTTTCTACTCCCTCTTGTGAAGTTTTTTGGTCACTATCTTAATGTCACCTGGCAGGTTTGGCGCTGACCTACAGCAAAATTTCCACAATTGATCCATCTCACCTTCCAATGAATATTAATAACAGAGCATCAATCCTACTCAGTAGAATAT	20	PASS	ClusterIDs=HG4_PB_pbsv_8509:HG2_PB_pbsv_8507:HG3_PB_pbsv_8289:HG2_PB_assemblyticsfalcon_25311:HG2_Ill_breakscan11_3871:HG3_PB_SVrefine2Falcon1Dovetail_5173:HG4_PB_SVrefine2Falcon1Dovetail_5174:HG4_Ill_SVrefine2DISCOVARDovetail_6207:HG4_Ill_GATKHCSBGrefine_5948:HG4_Ill_Cortex_3504:HG3_Ill_manta_2006:HG3_Ill_MetaSV_5005:HG3_Ill_GATKHCSBGrefine_5781:HG3_Ill_Cortex_3523:HG2_PB_SVrefine2PBcRplusDovetail_10451:HG2_PB_SVrefine2PB10Xhap12_6204:HG2_PB_SVrefine2Falcon1plusDovetail_11244:HG2_Ill_SVrefine2DISCOVARplusDovetail_12327:HG2_Ill_MetaSV_4823:HG2_Ill_GATKHCSBGrefine_5865:HG2_Ill_Cortex_8510:HG2_10X_SVrefine210Xhap12_6068:HG2_PB_PB10Xdip_26340:HG2_PB_HySA_15562;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6068:HG2_Ill_Cortex_8510:HG2_Ill_GATKHCSBGrefine_5865:HG2_Ill_MetaSV_4823:HG2_Ill_SVrefine2DISCOVARplusDovetail_12327:HG2_PB_SVrefine2Falcon1plusDovetail_11244:HG2_PB_SVrefine2PB10Xhap12_6204:HG2_PB_SVrefine2PBcRplusDovetail_10451:HG3_Ill_Cortex_3523:HG3_Ill_GATKHCSBGrefine_5781:HG3_Ill_MetaSV_5005:HG3_Ill_manta_2006:HG4_Ill_Cortex_3504:HG4_Ill_GATKHCSBGrefine_5948:HG4_Ill_SVrefine2DISCOVARDovetail_6207;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0751445;ClusterMaxSizeDiff=0.0751445;ClusterMaxEditDist=0.209335;PBcalls=11;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=340;DistBack=63255;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=7:112979622-112979627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:42:1/1:5:28:0:15:./.:0:0:0:0:1/1:0:33:./.:3:37:.:.:.
chr7	114252443	HG4_Ill_150bpfermikitraw_11200	T	TATACGTATATATGTGTGTATATATGGGATTTTTAATACACACACACACAC	20	PASS	ClusterIDs=HG4_PB_HySA_12555:HG2_PB_HySA_15579:HG2_PB_pbsv_8517:HG2_PB_PB10Xdip_26343:HG4_Ill_GATKHC_14037:HG2_Ill_GATKHC_14001:HG2_Ill_SpiralSDKrefine_16199:HG4_Ill_svaba_10969:HG4_Ill_scalpel_8078:HG4_Ill_Krunchall_12353:HG4_Ill_250bpfermikitraw_11678:HG4_Ill_150bpfermikitraw_11200:HG2_Ill_svaba_10859:HG2_Ill_scalpel_8278:HG2_Ill_Krunchall_12037:HG2_Ill_250bpfermikitraw_11717:HG2_Ill_150bpfermikitraw_11024;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11024:HG2_Ill_250bpfermikitraw_11717:HG2_Ill_Krunchall_12037:HG2_Ill_scalpel_8278:HG2_Ill_svaba_10859:HG4_Ill_150bpfermikitraw_11200:HG4_Ill_250bpfermikitraw_11678:HG4_Ill_Krunchall_12353:HG4_Ill_scalpel_8078:HG4_Ill_svaba_10969;NumExactMatchSVs=10;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.115385;ClusterMaxEditDist=0.230769;PBcalls=4;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=10;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=77;REFWIDENED=7:114252428-114252504;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5117.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:45:0|1:33:2:5:39:./.:0:0:0:0:0/1:21:29:./.:.:.:.:.:.
chr7	114685111	HG2_CG_vcfBeta_4986	C	CCCTGATTCCAAAAGATTACACTTCAGGAAGAGGATTCACTTCATGAATTT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_26344:HG2_PB_HySA_15582:HG4_PB_pbsv_8519:HG4_PB_SVrefine2PBcRDovetail_4217:HG2_PB_pbsv_8519:HG2_Ill_breakscan11_3873:HG4_Ill_svaba_10974:HG4_Ill_scalpel_8079:HG4_Ill_SVrefine2DISCOVARDovetail_6215:HG4_Ill_Krunchall_12355:HG4_Ill_GATKHC_14039:HG4_Ill_GATKHCSBGrefine_5956:HG4_Ill_FB_7662:HG4_Ill_250bpfermikitraw_11680:HG4_Ill_150bpfermikitraw_11203:HG4_CG_vcfBeta_5602:HG3_PB_SVrefine2PBcRDovetail_3845:HG3_PB_SVrefine2Falcon1Dovetail_5179:HG3_Ill_svaba_10957:HG3_Ill_scalpel_8404:HG3_Ill_SVrefine2DISCOVARDovetail_6378:HG3_Ill_Krunchall_11754:HG3_Ill_GATKHC_13970:HG3_Ill_GATKHCSBGrefine_5790:HG3_Ill_FB_7601:HG3_Ill_250bpfermikitraw_11397:HG3_Ill_150bpfermikitraw_11087:HG3_CG_vcfBeta_4753:HG2_PB_assemblyticsfalcon_25326:HG2_PB_SVrefine2PBcRplusDovetail_10456:HG2_PB_SVrefine2PB10Xhap12_6210:HG2_PB_SVrefine2Falcon2Bionano_4139:HG2_Ill_svaba_10865:HG2_Ill_scalpel_8280:HG2_Ill_SVrefine2DISCOVARplusDovetail_12336:HG2_Ill_Krunchall_12041:HG2_Ill_GATKHC_14003:HG2_Ill_GATKHCSBGrefine_5873:HG2_Ill_FB_7695:HG2_Ill_250bpfermikitraw_11721:HG2_Ill_150bpfermikitraw_11029:HG2_CG_vcfBeta_4986:HG2_10X_SVrefine210Xhap12_6075;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6075:HG2_CG_vcfBeta_4986:HG2_Ill_150bpfermikitraw_11029:HG2_Ill_250bpfermikitraw_11721:HG2_Ill_FB_7695:HG2_Ill_GATKHCSBGrefine_5873:HG2_Ill_GATKHC_14003:HG2_Ill_Krunchall_12041:HG2_Ill_SVrefine2DISCOVARplusDovetail_12336:HG2_Ill_scalpel_8280:HG2_Ill_svaba_10865:HG2_PB_SVrefine2Falcon2Bionano_4139:HG2_PB_SVrefine2PB10Xhap12_6210:HG2_PB_SVrefine2PBcRplusDovetail_10456:HG2_PB_assemblyticsfalcon_25326:HG3_CG_vcfBeta_4753:HG3_Ill_150bpfermikitraw_11087:HG3_Ill_250bpfermikitraw_11397:HG3_Ill_FB_7601:HG3_Ill_GATKHCSBGrefine_5790:HG3_Ill_GATKHC_13970:HG3_Ill_Krunchall_11754:HG3_Ill_SVrefine2DISCOVARDovetail_6378:HG3_Ill_scalpel_8404:HG3_Ill_svaba_10957:HG3_PB_SVrefine2Falcon1Dovetail_5179:HG3_PB_SVrefine2PBcRDovetail_3845:HG4_CG_vcfBeta_5602:HG4_Ill_150bpfermikitraw_11203:HG4_Ill_250bpfermikitraw_11680:HG4_Ill_FB_7662:HG4_Ill_GATKHCSBGrefine_5956:HG4_Ill_GATKHC_14039:HG4_Ill_Krunchall_12355:HG4_Ill_SVrefine2DISCOVARDovetail_6215:HG4_Ill_scalpel_8079:HG4_Ill_svaba_10974:HG4_PB_SVrefine2PBcRDovetail_4217;NumExactMatchSVs=38;ClusterMaxShiftDist=0.130841;ClusterMaxSizeDiff=0.130841;ClusterMaxEditDist=0.285714;PBcalls=11;Illcalls=28;TenXcalls=1;CGcalls=3;PBexactcalls=7;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=3;HG2count=19;HG3count=12;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=50;DistBack=5839;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=52;REFWIDENED=7:114685112-114685163;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:1:17:3:33:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr7	114956587	HG2_Ill_MetaSV_4827	A	AGTAAAATGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_15585:HG2_Ill_breakscan11_3874:HG2_PB_pbsv_8520:HG3_PB_pbsv_8301:HG2_PB_SVrefine2Falcon2Bionano_4140:HG2_PB_assemblyticsfalcon_25328:HG2_Ill_MetaSV_4827:HG2_PB_SVrefine2Falcon1plusDovetail_11249;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_MetaSV_4827:HG2_PB_SVrefine2Falcon2Bionano_4140;NumExactMatchSVs=2;ClusterMaxShiftDist=0.218121;ClusterMaxSizeDiff=0.214765;ClusterMaxEditDist=0.287648;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=320;DistBack=-14;DistForward=2;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=7:114956588-114956601;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:41:0|1:34:2:1:34:./.:0:0:0:0:0/1:28:13:0/1:10:12:.:.:.
chr7	116652645	HG2_Ill_250bpfermikitraw_11734	A	ATAAGTAAACCAAGGCTCAGAGAGGTTTAAAAACTTGCTTAATGAAGATAATCTATCTAGTAAG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_11734:HG4_PB_HySA_12574:HG4_PB_pbsv_8523:HG2_PB_HySA_15598:HG4_Ill_GATKHCSBGrefine_5962;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11734:HG4_Ill_GATKHCSBGrefine_5962;NumExactMatchSVs=2;ClusterMaxShiftDist=0.120301;ClusterMaxSizeDiff=0.075188;ClusterMaxEditDist=0.165414;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=63;DistBack=7661;DistForward=153;DistMin=153;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=187;REFWIDENED=7:116652646-116652832;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:35:0|1:23:3:7:26:./.:0:0:0:0:0/1:20:15:./.:.:.:.:.:.
chr7	118083307	HG4_Ill_GATKHCSBGrefine_5966	T	TAATTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3853:HG4_PB_pbsv_8529:HG3_PB_pbsv_8310:HG4_PB_HySA_12588:HG2_PB_pbsv_8530:HG4_Ill_MetaSV_5055:HG4_Ill_GATKHCSBGrefine_5966:HG2_Ill_GATKHCSBGrefine_5881:HG2_Ill_breakscan11_3876:HG3_PB_HySA_13005:HG4_PB_SVrefine2Falcon1Dovetail_5184:HG3_PB_SVrefine2Falcon1Dovetail_5187:HG2_PB_SVrefine2Falcon1plusDovetail_11257;NumClusterSVs=13;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_5966:HG4_Ill_MetaSV_5055;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0616333;ClusterMaxSizeDiff=0.0585516;ClusterMaxEditDist=0.203647;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=-5;DistForward=42034;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=7:118083302-118083314;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:21:0|1:27:0:0:29:./.:0:0:0:0:0/1:29:8:0/1:6:39:.:.:.
chr7	118211209	HG2_Ill_GATKHCSBGrefine_5882	A	AAAAGAAACTGAGATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG4_PB_HySA_12589:HG4_Ill_GATKHC_14072:HG4_Ill_manta_2105:HG2_PB_HySA_15611:HG2_Ill_GATKHC_14032:HG2_Ill_GATKHCSBGrefine_5882;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5882:HG2_Ill_GATKHC_14032;NumExactMatchSVs=2;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.190476;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=85845;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=51;REFWIDENED=7:118211210-118211260;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5123.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:32:2:3:25:./.:0:0:0:0:0/1:13:8:./.:.:.:.:.:.
chr7	118308476	HG2_Ill_GATKHCSBGrefine_5883	A	ACAGACTACAATTCATAAAAGTTAATTGTATTTTACCACAGTAGCAGTGGACAACCTGAAAATAAATAGCC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11057:HG2_PB_pbsv_8531:HG2_PB_PB10Xdip_26354:HG2_Ill_breakscan11_3877:HG3_PB_HySA_13007:HG3_PB_pbsv_8311:HG2_PB_HySA_15613:HG3_Ill_manta_2013:HG3_Ill_Spiral_9208:HG4_Ill_svaba_11004:HG4_Ill_manta_2106:HG4_Ill_Krunchall_12383:HG4_Ill_GATKHCSBGrefine_5967:HG4_Ill_250bpfermikitraw_11714:HG4_Ill_150bpfermikitraw_11238:HG3_Ill_svaba_10981:HG3_Ill_Krunchall_11779:HG3_Ill_GATKHCSBGrefine_5795:HG3_Ill_250bpfermikitraw_11422:HG2_Ill_svaba_10889:HG2_Ill_manta_2452:HG2_Ill_SpiralSDKrefine_16220:HG2_Ill_Krunchall_12066:HG2_Ill_GATKHCSBGrefine_5883:HG2_Ill_250bpfermikitraw_11749;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11057:HG4_Ill_svaba_11004:HG4_Ill_manta_2106:HG4_Ill_Krunchall_12383:HG4_Ill_GATKHCSBGrefine_5967:HG4_Ill_250bpfermikitraw_11714:HG4_Ill_150bpfermikitraw_11238:HG3_Ill_svaba_10981:HG3_Ill_Krunchall_11779:HG3_Ill_GATKHCSBGrefine_5795:HG3_Ill_250bpfermikitraw_11422:HG2_Ill_svaba_10889:HG2_Ill_manta_2452:HG2_Ill_SpiralSDKrefine_16220:HG2_Ill_Krunchall_12066:HG2_Ill_GATKHCSBGrefine_5883:HG2_Ill_250bpfermikitraw_11749;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0839161;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.236111;PBcalls=5;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=7:118308475-118308477;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:78:./.:0:61:0:4:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr7	121690487	HG3_PB_SVrefine2Falcon1Dovetail_5198	T	TGAAGGGGAGGAGAGGGGAGGGGAAGGAAGGGGAGGGGAGGGGAAGGAAGGGGAGGGGAGGGGAAG	10	PASS	ClusterIDs=HG4_PB_pbsv_8542:HG4_PB_HySA_12617:HG2_PB_pbsv_8541:HG3_PB_HySA_13026:HG2_PB_HySA_15632:HG2_PB_PB10Xdip_26367:HG2_PB_SVrefine2Falcon2Bionano_4156:HG4_PB_SVrefine2PBcRDovetail_4233:HG3_PB_SVrefine2PBcRDovetail_3864:HG3_PB_SVrefine2Falcon1Dovetail_5198:HG2_PB_SVrefine2PB10Xhap12_6230:HG2_PB_SVrefine2PBcRplusDovetail_10474;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6230:HG3_PB_SVrefine2Falcon1Dovetail_5198:HG3_PB_SVrefine2PBcRDovetail_3864:HG4_PB_SVrefine2PBcRDovetail_4233;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0882353;ClusterMaxSizeDiff=0.0882353;ClusterMaxEditDist=0.343284;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=65;DistBack=26706;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=47;REFWIDENED=7:121690488-121690534;PctSeqSimilarity=0.9623;PctSizeSimilarity=0.9286;PctRecOverlap=0.8028;SizeDiff=-5;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=89;MatchId=5125.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:1:29:0:24:./.:0:0:0:0:0/1:5:6:./.:.:.:.:.:.
chr7	121912570	HG2_Ill_250bpfermikitraw_11771	T	TCTTCCTTCCTTCCTTCCTTTCTTTATTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_11771:HG4_PB_HySA_12619:HG2_PB_HySA_15633:HG4_PB_pbsv_8543:HG4_Ill_manta_2108:HG4_Ill_150bpfermikitraw_11263:HG2_Ill_scalpel_8318:HG2_Ill_Krunchall_12089;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11771:HG4_Ill_150bpfermikitraw_11263:HG2_Ill_scalpel_8318:HG2_Ill_Krunchall_12089;NumExactMatchSVs=4;ClusterMaxShiftDist=0.145985;ClusterMaxSizeDiff=0.145985;ClusterMaxEditDist=0.229008;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=30;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=11;REFWIDENED=7:121912569-121912582;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:31:1|0:8:26:32:2:./.:0:0:0:0:0/1:19:18:./.:.:.:.:.:.
chr7	122640459	HG2_Ill_GATKHCSBGrefine_5895	T	TTATTATTTCAATAATACTTTGAAATAAGTATTATTTCAATAATACTTTGAAATAAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6102:HG3_PB_pbsv_8327:HG2_PB_HySA_15638:HG2_PB_PB10Xdip_26370:HG3_Ill_svaba_11007:HG3_Ill_manta_2014:HG3_Ill_Spiral_9236:HG3_Ill_Krunchall_11812:HG3_Ill_GATKHC_14039:HG3_Ill_GATKHCSBGrefine_5815:HG3_Ill_FB_7646:HG3_Ill_250bpfermikitraw_11450:HG3_Ill_150bpfermikitraw_11150:HG2_Ill_svaba_10909:HG2_Ill_manta_2455:HG2_Ill_SpiralSDKrefine_16240:HG2_Ill_Krunchall_12096:HG2_Ill_GATKHC_14070:HG2_Ill_GATKHCSBGrefine_5895:HG2_Ill_FB_7738:HG2_Ill_250bpfermikitraw_11780:HG2_Ill_150bpfermikitraw_11087:HG2_Ill_breakscan11_3878:HG2_PB_pbsv_8545:HG3_Ill_SVrefine2DISCOVARDovetail_6410:HG2_PB_SVrefine2PBcRplusDovetail_10476:HG2_PB_SVrefine2PB10Xhap12_6232:HG2_PB_SVrefine2Falcon1plusDovetail_11268:HG2_Ill_SVrefine2DISCOVARplusDovetail_12363;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11087:HG2_Ill_250bpfermikitraw_11780:HG2_Ill_FB_7738:HG2_Ill_GATKHCSBGrefine_5895:HG2_Ill_GATKHC_14070:HG2_Ill_Krunchall_12096:HG2_Ill_SpiralSDKrefine_16240:HG2_Ill_manta_2455:HG2_Ill_svaba_10909:HG3_Ill_150bpfermikitraw_11150:HG3_Ill_250bpfermikitraw_11450:HG3_Ill_FB_7646:HG3_Ill_GATKHCSBGrefine_5815:HG3_Ill_GATKHC_14039:HG3_Ill_Krunchall_11812:HG3_Ill_Spiral_9236:HG3_Ill_manta_2014:HG3_Ill_svaba_11007;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0862069;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.271186;PBcalls=7;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=56;DistBack=-45;DistForward=798;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=56;REFWIDENED=7:122640449-122640504;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5127.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:44:0|1:26:1:6:39:./.:0:0:0:0:0/1:28:33:./.:.:.:.:.:.
chr7	124066076	HG3_Ill_GATKHCSBGrefine_5818	T	TCTTTTTGACGCTATTGTGAACAAAACCGCTTTCTTAATGTCCTTTTTGGATGGTTTGTTGTTAGTATATAGAAACACAACCTATTTTTATATGTTGATTTTGTATCCTGCAACTTTACTGAATTCATTTATTAGTTCTAACAGGTTTTTTTTTTTTTTTTTTTTGTAAAGAACATTACTTGCAAGAAAAAGCTTTTGTAGAGTCAAGGTCTCGTGACACATAGTGGTTAAAAACCTTAATTGAGGTGTCATGGCTGAAGCACAAAACTAGGCCTAGAAAGAGTAGTCCGTGGTTAATGGAATTTAAAGTCCTGATCGTCTACCAAAAAAAAAAAAAAAATCAGCATTCTTTCTGTTACCCAGCACAGACTTCCCTACAGTTGTCTTATTCCAGAGAACATCAGAAACATTAAGAGTACAGCATCTGAGTTCAAAGAAAGGTAGATTAAAAGAAATAAAAATATTTCCTAATTTCAATGACCACAGAATATAAATGAATAAGAAAACAGAGAGAAAATGTCCTTGATGTGTTAGACATATTTACCTTCGACATCATAATGTTTTAAGTGACATAATGCATAAAAGGAAAAAATGGATTTCATGATGTTATTACTTTACTGAAGAGGCAATTCTTAACTAAAAAGATCTGATCTGTTGTGATGATTAGTTATTTACTTTTTCCAGAAAAAAAATTAGACTTTAAAAAGACCTTAAAGTCCCCTACACCCCCGACACACCCAGGCACACATTTAGATGAATCTGAG	20	PASS	ClusterIDs=HG2_PB_HySA_15655:HG3_PB_pbsv_8331:HG2_PB_pbsv_8549:HG4_PB_assemblyticsfalcon_24806:HG4_PB_pbsv_8554:HG4_PB_SVrefine2Falcon1Dovetail_5202:HG4_Ill_MetaSV_5064:HG4_Ill_SVrefine2DISCOVARDovetail_6251:HG2_PB_SVrefine2Falcon2Bionano_4159:HG2_PB_SVrefine2PBcRplusDovetail_10478:HG2_10X_SVrefine210Xhap12_6106:HG2_PB_SVrefine2Falcon1plusDovetail_11271:HG4_PB_SVrefine2PBcRDovetail_4236:HG3_Ill_SVrefine2DISCOVARDovetail_6416:HG3_Ill_MetaSV_5016:HG3_Ill_GATKHCSBGrefine_5818:HG4_Ill_GATKHCSBGrefine_5982:HG4_PB_HySA_12639;NumClusterSVs=18;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_5818:HG3_Ill_MetaSV_5016:HG3_Ill_SVrefine2DISCOVARDovetail_6416;NumExactMatchSVs=3;ClusterMaxShiftDist=0.173019;ClusterMaxSizeDiff=0.173019;ClusterMaxEditDist=0.284543;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=763;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:124066077-124066077;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9871;PctRecOverlap=0.9871;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:39:0|1:37:4:0:27:./.:0:0:0:0:0/1:27:13:0/1:12:44:.:.:.
chr7	125873869	HG3_PB_SVrefine2Falcon1Dovetail_5209	G	GCTGGAGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG3_PB_HySA_13052:HG4_PB_assemblyticsfalcon_24817:HG2_PB_pbsv_8552:HG3_PB_assemblyticsfalcon_25243:HG2_PB_HySA_15671:HG3_Ill_MetaSV_5019:HG3_PB_SVrefine2PBcRDovetail_3872:HG4_PB_SVrefine2Falcon1Dovetail_5204:HG3_PB_SVrefine2Falcon1Dovetail_5209:HG3_PB_pbsv_8339:HG2_PB_SVrefine2PB10Xhap12_6237;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5209:HG4_PB_SVrefine2Falcon1Dovetail_5204;NumExactMatchSVs=2;ClusterMaxShiftDist=0.113703;ClusterMaxSizeDiff=0.113703;ClusterMaxEditDist=0.207194;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=340;DistBack=15327;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=7:125873870-125873881;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9971;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5129.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:0|1:21:2:0:38:./.:0:0:0:0:0/1:20:11:0/1:9:25:.:.:.
chr7	126150701	HG2_Ill_svaba_10933	G	GGCTCCATTTGGTATATTTAAAAAGAGATATATTTTAACTTGACTTAAGGAGCAACTTAGAGTCACTGCT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3880:HG3_PB_pbsv_8340:HG4_PB_pbsv_8560:HG2_PB_pbsv_8553:HG4_PB_assemblyticsfalcon_24819:HG4_Ill_svaba_11050:HG4_Ill_manta_2116:HG4_Ill_Krunchall_12448:HG4_Ill_GATKHC_14141:HG4_Ill_GATKHCSBGrefine_5990:HG4_Ill_Cortex_3520:HG4_Ill_250bpfermikitraw_11774:HG4_Ill_150bpfermikitraw_11298:HG3_PB_assemblyticsfalcon_25245:HG3_Ill_svaba_11033:HG3_Ill_manta_2019:HG3_Ill_Spiral_9254:HG3_Ill_Krunchall_11833:HG3_Ill_GATKHC_14074:HG3_Ill_GATKHCSBGrefine_5828:HG3_Ill_Cortex_3539:HG3_Ill_250bpfermikitraw_11479:HG3_Ill_150bpfermikitraw_11174:HG2_PB_SVrefine2PBcRplusDovetail_10480:HG2_PB_SVrefine2PB10Xhap12_6238:HG2_Ill_svaba_10933:HG2_Ill_manta_2461:HG2_Ill_SpiralSDKrefine_16256:HG2_Ill_Krunchall_12126:HG2_Ill_GATKHC_14100:HG2_Ill_GATKHCSBGrefine_5905:HG2_Ill_Cortex_8537:HG2_Ill_250bpfermikitraw_11807:HG2_Ill_150bpfermikitraw_11115:HG2_PB_HySA_15674;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11115:HG2_Ill_250bpfermikitraw_11807:HG2_Ill_Cortex_8537:HG2_Ill_GATKHCSBGrefine_5905:HG2_Ill_GATKHC_14100:HG2_Ill_Krunchall_12126:HG2_Ill_SpiralSDKrefine_16256:HG2_Ill_manta_2461:HG2_Ill_svaba_10933:HG2_PB_SVrefine2PB10Xhap12_6238:HG2_PB_SVrefine2PBcRplusDovetail_10480:HG3_Ill_150bpfermikitraw_11174:HG3_Ill_250bpfermikitraw_11479:HG3_Ill_Cortex_3539:HG3_Ill_GATKHCSBGrefine_5828:HG3_Ill_GATKHC_14074:HG3_Ill_Krunchall_11833:HG3_Ill_Spiral_9254:HG3_Ill_manta_2019:HG3_Ill_svaba_11033:HG3_PB_assemblyticsfalcon_25245:HG4_Ill_150bpfermikitraw_11298:HG4_Ill_250bpfermikitraw_11774:HG4_Ill_Cortex_3520:HG4_Ill_GATKHCSBGrefine_5990:HG4_Ill_GATKHC_14141:HG4_Ill_Krunchall_12448:HG4_Ill_manta_2116:HG4_Ill_svaba_11050:HG4_PB_assemblyticsfalcon_24819;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0704225;ClusterMaxSizeDiff=0.056338;ClusterMaxEditDist=0.211268;PBcalls=8;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=2300;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=7:126150702-126150703;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:0:36:2:21:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr7	126661391	HG4_Ill_GATKHCSBGrefine_5991	G	GGGAAATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_pbsv_8561:HG4_PB_HySA_12658:HG2_PB_SVrefine2PB10Xhap12_6239:HG2_PB_HySA_15682:HG3_PB_assemblyticsfalcon_25253:HG2_PB_SVrefine2Falcon2Bionano_4161:HG3_PB_SVrefine2Falcon1Dovetail_5210:HG4_PB_SVrefine2PBcRDovetail_4239:HG4_Ill_MetaSV_5069:HG4_Ill_GATKHCSBGrefine_5991:HG2_Ill_MetaSV_4838:HG2_Ill_GATKHCSBGrefine_5906:HG2_PB_SVrefine2Falcon1plusDovetail_11274:HG4_PB_SVrefine2Falcon1Dovetail_5205:HG2_Ill_breakscan11_3881:HG2_PB_pbsv_8554;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5906:HG2_Ill_MetaSV_4838:HG4_Ill_GATKHCSBGrefine_5991:HG4_Ill_MetaSV_5069:HG4_PB_SVrefine2PBcRDovetail_4239;NumExactMatchSVs=5;ClusterMaxShiftDist=0.208264;ClusterMaxSizeDiff=0.208264;ClusterMaxEditDist=0.242123;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=311;DistBack=1736;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=7:126661392-126661404;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9936;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:24:0|1:29:3:0:19:./.:0:0:0:0:0/1:31:12:./.:4:51:.:.:.
chr7	126870214	HG2_Ill_MetaSV_4839	T	TAAGAGGGTACAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3882:HG4_PB_pbsv_8563:HG2_PB_SVrefine2PBcRplusDovetail_10481:HG2_PB_pbsv_8557:HG2_PB_SVrefine2Falcon1plusDovetail_11275:HG2_PB_PB10Xdip_26416:HG2_PB_SVrefine2PB10Xhap12_6240:HG4_Ill_MetaSV_5070:HG4_Ill_GATKHCSBGrefine_5994:HG2_Ill_MetaSV_4839:HG2_Ill_GATKHCSBGrefine_5909:HG2_PB_SVrefine2Falcon2Bionano_4162:HG4_PB_SVrefine2Falcon1Dovetail_5207:HG2_PB_HySA_15684:HG4_PB_HySA_12664;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5909:HG2_Ill_MetaSV_4839:HG4_Ill_GATKHCSBGrefine_5994:HG4_Ill_MetaSV_5070;NumExactMatchSVs=4;ClusterMaxShiftDist=0.254967;ClusterMaxSizeDiff=0.251656;ClusterMaxEditDist=0.311258;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=64984;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=7:126870215-126870228;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:36:0|1:26:2:0:32:./.:0:0:0:0:0/1:38:10:0/1:7:33:.:.:.
chr7	126893473	HG2_Ill_250bpfermikitraw_11816	G	GGCGAGCCCGGGACCGGCGCGGGGAGGCGCGACGCCCGCCCGAGCACAGCGGGCAGCACCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5212:HG2_PB_pbsv_8558:HG4_PB_pbsv_8564:HG2_PB_HySA_15685:HG2_PB_PB10Xdip_26417:HG4_PB_SVrefine2PBcRDovetail_4241:HG4_Ill_scalpel_8142:HG4_Ill_SVrefine2DISCOVARDovetail_6260:HG4_Ill_Krunchall_12456:HG4_Ill_GATKHC_14153:HG4_Ill_GATKHCSBGrefine_5995:HG4_Ill_250bpfermikitraw_11782:HG4_Ill_150bpfermikitraw_11307:HG3_Ill_Krunchall_11839:HG3_Ill_GATKHC_14085:HG3_Ill_GATKHCSBGrefine_5830:HG3_Ill_250bpfermikitraw_11485:HG3_Ill_150bpfermikitraw_11182:HG2_PB_SVrefine2PBcRplusDovetail_10482:HG2_PB_SVrefine2PB10Xhap12_6241:HG2_PB_SVrefine2Falcon2Bionano_4163:HG2_PB_SVrefine2Falcon1plusDovetail_11276:HG2_Ill_SVrefine2DISCOVARplusDovetail_12379:HG2_Ill_Krunchall_12136:HG2_Ill_GATKHC_14114:HG2_Ill_GATKHCSBGrefine_5910:HG2_Ill_250bpfermikitraw_11816:HG2_Ill_150bpfermikitraw_11126:HG2_10X_SVrefine210Xhap12_6117;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6117:HG2_Ill_150bpfermikitraw_11126:HG2_Ill_250bpfermikitraw_11816:HG2_Ill_GATKHCSBGrefine_5910:HG2_Ill_GATKHC_14114:HG2_Ill_Krunchall_12136:HG2_Ill_SVrefine2DISCOVARplusDovetail_12379:HG2_PB_SVrefine2Falcon1plusDovetail_11276:HG2_PB_SVrefine2Falcon2Bionano_4163:HG2_PB_SVrefine2PB10Xhap12_6241:HG2_PB_SVrefine2PBcRplusDovetail_10482:HG3_Ill_150bpfermikitraw_11182:HG3_Ill_250bpfermikitraw_11485:HG3_Ill_GATKHCSBGrefine_5830:HG3_Ill_GATKHC_14085:HG3_Ill_Krunchall_11839:HG4_Ill_150bpfermikitraw_11307:HG4_Ill_250bpfermikitraw_11782:HG4_Ill_GATKHCSBGrefine_5995:HG4_Ill_GATKHC_14153:HG4_Ill_Krunchall_12456:HG4_Ill_SVrefine2DISCOVARDovetail_6260:HG4_Ill_scalpel_8142:HG4_PB_SVrefine2PBcRDovetail_4241;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.193548;PBcalls=10;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=60;DistBack=23246;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=71;REFWIDENED=7:126893474-126893544;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:1/1:2:22:2:30:./.:0:0:0:0:1/1:1:39:./.:.:.:.:.:.
chr7	126899611	HG2_PB_HySA_15686	T	TCACCACCACCACCACCTTCACCACAATCATCACCATCACTACCACCATCAC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_26418:HG2_PB_pbsv_8559:HG3_PB_assemblyticsfalcon_25257:HG4_PB_pbsv_8565:HG2_PB_HySA_15686:HG3_PB_pbsv_8342;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_15686:HG3_PB_assemblyticsfalcon_25257;NumExactMatchSVs=2;ClusterMaxShiftDist=0.12963;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.339286;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=51;DistBack=3838;DistForward=104;DistMin=104;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=116;REFWIDENED=7:126899610-126899728;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5134.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:39:1/1:2:18:3:16:./.:0:0:0:0:0/1:8:5:./.:.:.:.:.:.
chr7	127929318	HG2_10X_SVrefine210Xhap12_6123	T	TATGGCCACTATTATTTTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGCGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCAGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCATCACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5216:HG4_PB_pbsv_8569:HG3_PB_assemblyticsfalcon_25264:HG2_PB_pbsv_8564:HG2_PB_HySA_15698:HG3_PB_pbsv_8347:HG4_PB_HySA_12670:HG3_PB_HySA_13075:HG2_PB_PB10Xdip_26422:HG2_PB_HySA_15697:HG2_PB_SVrefine2Falcon2Bionano_4167:HG4_PB_SVrefine2PBcRDovetail_4245:HG3_PB_SVrefine2PBcRDovetail_3878:HG3_Ill_manta_2023:HG3_Ill_MetaSV_5024:HG3_Ill_GATKHCSBGrefine_5835:HG2_PB_SVrefine2PBcRplusDovetail_10487:HG2_PB_SVrefine2PB10Xhap12_6247:HG2_Ill_manta_2465:HG2_10X_SVrefine210Xhap12_6123:HG4_Ill_manta_2120:HG4_Ill_MetaSV_5074:HG4_Ill_GATKHCSBGrefine_5998:HG2_Ill_MetaSV_4843:HG2_Ill_GATKHCSBGrefine_5915:HG4_PB_SVrefine2Falcon1Dovetail_5211:HG2_PB_SVrefine2Falcon1plusDovetail_11281;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6123:HG2_Ill_manta_2465:HG2_PB_SVrefine2PB10Xhap12_6247:HG2_PB_SVrefine2PBcRplusDovetail_10487:HG3_Ill_GATKHCSBGrefine_5835:HG3_Ill_MetaSV_5024:HG3_Ill_manta_2023:HG3_PB_SVrefine2PBcRDovetail_3878;NumExactMatchSVs=8;ClusterMaxShiftDist=0.046875;ClusterMaxSizeDiff=0.0375;ClusterMaxEditDist=0.191654;PBcalls=17;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=316;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=7:127929319-127929330;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:23:0:31:./.:0:0:0:0:1/1:0:28:1/1:1:54:.:.:.
chr7	128438315	HG2_PB_SVrefine2Falcon2Bionano_4170	G	GTTTGTTTTGAGACGAAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGAGATCTTGGCTCACTGCAACTTCCACCTCCTGGGTTCAGGCGATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCACCTTGCCTGGCTAATTTTTTGTATTTTTAGTAGAAACGGGGTTTCAACCATTTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCGCCCCCCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTTAGCCACCGCGCCTGCTCCTCAGTAGGGTGCTTTCTAGGCTGAGATCCCCCACGGCCCTGCGGGAGAGACCGAGGCTGCCCTCGCGCACGCGCGTCACCCGTTTCCGCCTGGACGGGGCGCGCGCGGCCTTAGAGGCAGCTGCTGTTCAGAGGCCGTTCCGGCCGCCACAGCCCCTCCGGGGCGGGACCGGCCAGCGGCTGGGTGGCCCCCCAGGGACACAGCTCTACGGGGGGCGGCGAGATGGAGGCCATAACCAGTGAGTGAGAATCCACTTCTCTGCCCGCAGCCCGACTCCTCAGCCCTCGGCCTCGCCCGGACGGTCCCAGCCCCATACTCAACGGGCGCCAGCGCCTCGGAACCCGGGGGACCCTGGCTGGCCTCTTCAACTCCCGGGCGCTCCTGGATTAGTCTGCCCAGGCCTCGGGTCCTGTCCCGGGTGACTCTAGGTGACCCTGCACCTTCTGTTCCCAGTAGATCTGAGAATGCCTTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5219:HG3_PB_pbsv_8353:HG2_PB_SVrefine2Falcon1plusDovetail_11286:HG4_PB_pbsv_8576:HG4_PB_HySA_12679:HG2_PB_PB10Xdip_26427:HG4_Ill_Spiral_709:HG2_Ill_Spiral_609:HG3_Ill_Spiral_9269:HG2_PB_pbsv_8571:HG4_Ill_MetaSV_5076:HG4_Ill_GATKHCSBGrefine_6001:HG2_Ill_MetaSV_4846:HG2_Ill_GATKHCSBGrefine_5919:HG2_PB_SVrefine2Falcon1plusDovetail_11285:HG4_PB_SVrefine2Falcon1Dovetail_5216:HG4_PB_SVrefine2PBcRDovetail_4247:HG4_Ill_SVrefine2DISCOVARDovetail_6270:HG3_PB_SVrefine2PBcRDovetail_3880:HG3_Ill_SVrefine2DISCOVARDovetail_6432:HG2_PB_SVrefine2PBcRplusDovetail_10491:HG2_PB_SVrefine2PB10Xhap12_6253:HG2_PB_SVrefine2Falcon2Bionano_4170:HG2_Ill_SVrefine2DISCOVARplusDovetail_12389;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12389:HG2_PB_SVrefine2Falcon2Bionano_4170:HG2_PB_SVrefine2PB10Xhap12_6253:HG2_PB_SVrefine2PBcRplusDovetail_10491:HG3_Ill_SVrefine2DISCOVARDovetail_6432:HG3_PB_SVrefine2PBcRDovetail_3880:HG4_Ill_SVrefine2DISCOVARDovetail_6270:HG4_PB_SVrefine2PBcRDovetail_4247;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0801551;ClusterMaxSizeDiff=0.0711054;ClusterMaxEditDist=0.205976;PBcalls=14;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=764;DistBack=62456;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=281;REFWIDENED=7:128438316-128438596;PctSeqSimilarity=0.9945;PctSizeSimilarity=1;PctRecOverlap=0.9268;SizeDiff=0;StartDistance=-56;EndDistance=-56;GTMatch=0;TruScore=97;MatchId=5136.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:97:1/1:1:29:1:22:./.:0:0:0:0:1/1:0:12:1/1:5:103:.:984:.
chr7	128784711	HG2_PB_SVrefine2PBcRplusDovetail_10492	T	TCGGGCTCCAGCCGTCGCGCCAATGAGCGGCCGGGGGCGGGCCGGGTTTCCTGGGCGCCTGGCTGGCCGGGCTGGTCCTGCGGCCGCGGGTGAGTCTCGTCCGCTCGCGCTGCCCACCGCGGCTCCAGCAGCTCCAGGCGCGGTTCCCCGGCCCGCGCCGCTCCCGGCCCCCCGGCTCGGGCGCCTCCCGCCGCAGCGCAGGCTCCCCCGCCGGC	20	PASS	ClusterIDs=HG2_PB_pbsv_8573:HG2_PB_SVrefine2Falcon1plusDovetail_11287:HG3_PB_pbsv_8354:HG4_PB_SVrefine2PBcRDovetail_4248:HG4_PB_pbsv_8578:HG4_Ill_SVrefine2DISCOVARDovetail_6272:HG2_PB_assemblyticsPBcR_24647:HG4_Ill_MetaSV_5077:HG4_Ill_GATKHCSBGrefine_6003:HG2_PB_SVrefine2PBcRplusDovetail_10492:HG2_PB_SVrefine2PB10Xhap12_6254:HG2_PB_SVrefine2Falcon2Bionano_4171:HG2_Ill_SVrefine2DISCOVARplusDovetail_12392:HG2_Ill_MetaSV_4847:HG2_Ill_GATKHCSBGrefine_5921:HG2_10X_SVrefine210Xhap12_6127:HG4_PB_SVrefine2Falcon1Dovetail_5217:HG3_PB_SVrefine2PBcRDovetail_3881:HG3_Ill_SVrefine2DISCOVARDovetail_6433:HG3_Ill_MetaSV_5027:HG3_Ill_GATKHCSBGrefine_5839:HG3_PB_SVrefine2Falcon1Dovetail_5220:HG2_PB_PB10Xdip_26429;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6127:HG2_Ill_GATKHCSBGrefine_5921:HG2_Ill_MetaSV_4847:HG2_Ill_SVrefine2DISCOVARplusDovetail_12392:HG2_PB_SVrefine2Falcon2Bionano_4171:HG2_PB_SVrefine2PB10Xhap12_6254:HG2_PB_SVrefine2PBcRplusDovetail_10492:HG4_Ill_GATKHCSBGrefine_6003:HG4_Ill_MetaSV_5077:HG4_Ill_SVrefine2DISCOVARDovetail_6272:HG4_PB_SVrefine2PBcRDovetail_4248;NumExactMatchSVs=11;ClusterMaxShiftDist=0.287016;ClusterMaxSizeDiff=0.287016;ClusterMaxEditDist=0.328018;PBcalls=13;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=214;DistBack=4682;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=7:128784712-128784730;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:1/1:0:24:0:17:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr7	129116055	HG2_PB_PB10Xdip_26430	C	CGGGGCGGCTGGCCGGGCGGGGGCTGCCCCCCACCTCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGCCCCCCACCTCCCTCCCGGGT	10	PASS	ClusterIDs=HG4_PB_pbsv_8580:HG2_PB_PB10Xdip_26430:HG2_PB_pbsv_8574:HG3_PB_pbsv_8355;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_26430;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0215054;ClusterMaxEditDist=0.333333;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=91;DistBack=-1;DistForward=32;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=37;REFWIDENED=7:129116054-129116093;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9891;PctRecOverlap=0.9785;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:4:28:1:30:./.:0:0:0:0:1/1:2:34:./.:.:.:.:.:.
chr7	129157161	HG2_Ill_MetaSV_4848	T	TAGAAAGTGGGAGAGAAGGCCAGGTGCAGTGGCTCACACCTGTATTCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAAGTCAGGAGTTCCAGACCAGCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATAAAAAAATTAGCCAGGCATGGTGGCGTACACCTGTAATCCCAGCTACTCAGGAGGCCGAGGCAGAAGAATTGCTTGTACCTGGGAGGTAGATGTTGCAGTGAGCCAAGATTGTGCCATTGCACTCCAGCCTGGGCGACAGGAGGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_8581:HG2_PB_assemblyticsfalcon_25434:HG3_PB_pbsv_8356:HG4_PB_HySA_12684:HG2_PB_pbsv_8575:HG2_PB_HySA_15710:HG2_PB_assemblyticsPBcR_24648:HG3_Ill_MetaSV_5028:HG3_PB_HySA_13091:HG2_PB_HySA_15709:HG4_Ill_MetaSV_5079:HG4_Ill_GATKHCSBGrefine_6005:HG3_PB_SVrefine2PBcRDovetail_3882:HG3_Ill_SVrefine2DISCOVARDovetail_6434:HG3_Ill_GATKHCSBGrefine_5840:HG2_PB_SVrefine2PBcRplusDovetail_10493:HG2_PB_SVrefine2PB10Xhap12_6255:HG2_Ill_MetaSV_4848:HG2_10X_SVrefine210Xhap12_6128:HG4_Ill_SVrefine2DISCOVARDovetail_6273:HG2_PB_SVrefine2Falcon2Bionano_4172:HG2_Ill_SVrefine2DISCOVARplusDovetail_12394:HG2_Ill_GATKHCSBGrefine_5922:HG2_PB_SVrefine2Falcon1plusDovetail_11288:HG3_PB_SVrefine2Falcon1Dovetail_5222:HG4_PB_SVrefine2PBcRDovetail_4250:HG4_PB_SVrefine2Falcon1Dovetail_5219:HG2_Ill_breakscan11_3883:HG2_PB_PB10Xdip_26431;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6128:HG2_Ill_MetaSV_4848:HG2_PB_SVrefine2PB10Xhap12_6255:HG2_PB_SVrefine2PBcRplusDovetail_10493:HG3_Ill_GATKHCSBGrefine_5840:HG3_Ill_SVrefine2DISCOVARDovetail_6434:HG3_PB_SVrefine2PBcRDovetail_3882:HG4_Ill_GATKHCSBGrefine_6005;NumExactMatchSVs=8;ClusterMaxShiftDist=0.164087;ClusterMaxSizeDiff=0.164087;ClusterMaxEditDist=0.232489;PBcalls=18;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=321;DistBack=15060;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=7:129157162-129157179;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:1:20:0:31:./.:0:0:0:0:1/1:0:20:1/1:2:49:.:.:.
chr7	129433473	HG2_Ill_GATKHCSBGrefine_5923	T	TGATTAAATGCTCACCTACATACATGCTGACCTCAGCAGTCCCAGCAGCCCCCTGCAATACAC	20	PASS	ClusterIDs=HG4_PB_pbsv_8582:HG2_PB_HySA_15714:HG3_PB_pbsv_8357:HG2_PB_pbsv_8576:HG4_Ill_svaba_11079:HG4_Ill_manta_2125:HG4_Ill_Krunchall_12471:HG4_Ill_GATKHC_14173:HG4_Ill_GATKHCSBGrefine_6006:HG4_Ill_Cortex_3525:HG4_Ill_250bpfermikitraw_11797:HG4_Ill_150bpfermikitraw_11321:HG3_Ill_svaba_11059:HG3_Ill_manta_2024:HG3_Ill_Spiral_9273:HG3_Ill_Krunchall_11857:HG3_Ill_GATKHC_14107:HG3_Ill_GATKHCSBGrefine_5841:HG3_Ill_Cortex_3542:HG3_Ill_250bpfermikitraw_11500:HG3_Ill_150bpfermikitraw_11200:HG2_PB_assemblyticsfalcon_25436:HG2_PB_assemblyticsPBcR_24650:HG2_Ill_svaba_10962:HG2_Ill_manta_2468:HG2_Ill_SpiralSDKrefine_16278:HG2_Ill_Krunchall_12158:HG2_Ill_GATKHC_14136:HG2_Ill_GATKHCSBGrefine_5923:HG2_Ill_Cortex_8551:HG2_Ill_250bpfermikitraw_11834:HG2_Ill_150bpfermikitraw_11142:HG2_PB_PB10Xdip_26432:HG2_Ill_breakscan11_3884;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11142:HG2_Ill_250bpfermikitraw_11834:HG2_Ill_Cortex_8551:HG2_Ill_GATKHCSBGrefine_5923:HG2_Ill_GATKHC_14136:HG2_Ill_Krunchall_12158:HG2_Ill_SpiralSDKrefine_16278:HG2_Ill_manta_2468:HG2_Ill_svaba_10962:HG2_PB_assemblyticsPBcR_24650:HG2_PB_assemblyticsfalcon_25436:HG3_Ill_150bpfermikitraw_11200:HG3_Ill_250bpfermikitraw_11500:HG3_Ill_Cortex_3542:HG3_Ill_GATKHCSBGrefine_5841:HG3_Ill_GATKHC_14107:HG3_Ill_Krunchall_11857:HG3_Ill_Spiral_9273:HG3_Ill_manta_2024:HG3_Ill_svaba_11059:HG4_Ill_150bpfermikitraw_11321:HG4_Ill_250bpfermikitraw_11797:HG4_Ill_Cortex_3525:HG4_Ill_GATKHCSBGrefine_6006:HG4_Ill_GATKHC_14173:HG4_Ill_Krunchall_12471:HG4_Ill_manta_2125:HG4_Ill_svaba_11079;NumExactMatchSVs=28;ClusterMaxShiftDist=0.078125;ClusterMaxSizeDiff=0.0625;ClusterMaxEditDist=0.320611;PBcalls=7;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=7:129433472-129433475;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5140.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:34:1/1:2:12:1:14:./.:0:0:0:0:1/1:1:40:./.:.:.:.:.:.
chr7	129447943	HG3_PB_SVrefine2PBcRDovetail_3883	T	TCTCCTCTCCTCTCCTCTCCTCTCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCTCCCCCTCCCTCCCCCTCCCCTCCCTCCCTCCCCCCTCCCCTCCCCCTCCCTCCCTCCTCCCCTCCCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5223:HG3_PB_pbsv_8358:HG2_PB_PB10Xdip_26433:HG3_PB_HySA_13096:HG2_PB_pbsv_8577:HG2_PB_HySA_15716:HG3_PB_SVrefine2PBcRDovetail_3883:HG4_PB_pbsv_8583:HG2_PB_SVrefine2Falcon1plusDovetail_11289:HG4_PB_SVrefine2PBcRDovetail_4251:HG2_PB_SVrefine2PBcRplusDovetail_10494:HG2_PB_SVrefine2PB10Xhap12_6256:HG2_PB_SVrefine2Falcon2Bionano_4173:HG4_PB_SVrefine2Falcon1Dovetail_5220;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_3883;NumExactMatchSVs=1;ClusterMaxShiftDist=0.267717;ClusterMaxSizeDiff=0.267717;ClusterMaxEditDist=0.299213;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=128;DistBack=-36;DistForward=-1;DistMin=-36;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=7:129447944-129447979;PctSeqSimilarity=0.9694;PctSizeSimilarity=0.9688;PctRecOverlap=0.8295;SizeDiff=4;StartDistance=-20;EndDistance=-20;GTMatch=1;TruScore=92;MatchId=5141.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:37:1/1:2:8:1:9:./.:0:0:0:0:./.:0:3:./.:.:.:.:.:.
chr7	130418883	HG3_PB_SVrefine2Falcon1Dovetail_5224	C	CGAGCGCCGTCCGAACGCGGCCGGCCGCGGGCGACGGAGTTCCCGGGAGCGTCCGTCCCGCAGCCTCG	20	PASS	ClusterIDs=HG2_Ill_svaba_10970:HG3_PB_pbsv_8359:HG2_PB_PB10Xdip_26435:HG4_PB_pbsv_8584:HG2_Ill_breakscan11_3886:HG3_PB_assemblyticsfalcon_25279:HG2_PB_assemblyticsPBcR_24656:HG2_PB_assemblyticsfalcon_25441:HG4_PB_SVrefine2PBcRDovetail_4253:HG4_Ill_manta_2126:HG4_Ill_SVrefine2DISCOVARDovetail_6277:HG4_Ill_Krunchall_12477:HG4_Ill_GATKHC_14179:HG4_Ill_GATKHCSBGrefine_6007:HG4_Ill_Cortex_3527:HG4_Ill_250bpfermikitraw_11803:HG4_Ill_150bpfermikitraw_11327:HG3_PB_SVrefine2PBcRDovetail_3884:HG3_PB_SVrefine2Falcon1Dovetail_5224:HG3_Ill_manta_2025:HG3_Ill_Spiral_9277:HG3_Ill_SVrefine2DISCOVARDovetail_6438:HG3_Ill_Krunchall_11863:HG3_Ill_GATKHC_14113:HG3_Ill_GATKHCSBGrefine_5842:HG3_Ill_Cortex_3544:HG3_Ill_250bpfermikitraw_11506:HG3_Ill_150bpfermikitraw_11206:HG2_PB_SVrefine2PBcRplusDovetail_10495:HG2_PB_SVrefine2PB10Xhap12_6257:HG2_PB_SVrefine2Falcon2Bionano_4174:HG2_Ill_manta_2469:HG2_Ill_SpiralSDKrefine_16282:HG2_Ill_SVrefine2DISCOVARplusDovetail_12397:HG2_Ill_Krunchall_12164:HG2_Ill_GATKHC_14144:HG2_Ill_GATKHCSBGrefine_5924:HG2_Ill_Cortex_8554:HG2_Ill_250bpfermikitraw_11840:HG2_Ill_150bpfermikitraw_11148:HG2_10X_SVrefine210Xhap12_6132:HG4_Ill_svaba_11087:HG3_Ill_svaba_11070;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6132:HG2_Ill_150bpfermikitraw_11148:HG2_Ill_250bpfermikitraw_11840:HG2_Ill_Cortex_8554:HG2_Ill_GATKHCSBGrefine_5924:HG2_Ill_GATKHC_14144:HG2_Ill_Krunchall_12164:HG2_Ill_SVrefine2DISCOVARplusDovetail_12397:HG2_Ill_SpiralSDKrefine_16282:HG2_Ill_manta_2469:HG2_PB_SVrefine2Falcon2Bionano_4174:HG2_PB_SVrefine2PB10Xhap12_6257:HG2_PB_SVrefine2PBcRplusDovetail_10495:HG3_Ill_150bpfermikitraw_11206:HG3_Ill_250bpfermikitraw_11506:HG3_Ill_Cortex_3544:HG3_Ill_GATKHCSBGrefine_5842:HG3_Ill_GATKHC_14113:HG3_Ill_Krunchall_11863:HG3_Ill_SVrefine2DISCOVARDovetail_6438:HG3_Ill_Spiral_9277:HG3_Ill_manta_2025:HG3_PB_SVrefine2Falcon1Dovetail_5224:HG3_PB_SVrefine2PBcRDovetail_3884:HG4_Ill_150bpfermikitraw_11327:HG4_Ill_250bpfermikitraw_11803:HG4_Ill_Cortex_3527:HG4_Ill_GATKHCSBGrefine_6007:HG4_Ill_GATKHC_14179:HG4_Ill_Krunchall_12477:HG4_Ill_SVrefine2DISCOVARDovetail_6277:HG4_Ill_manta_2126:HG4_PB_SVrefine2PBcRDovetail_4253;NumExactMatchSVs=33;ClusterMaxShiftDist=0.165414;ClusterMaxSizeDiff=0.165414;ClusterMaxEditDist=0.240602;PBcalls=12;Illcalls=30;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=67;DistBack=18;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=7:130418884-130418888;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:1/1:2:17:2:39:./.:0:0:0:0:1/1:1:49:./.:.:.:.:.:.
chr7	130908891	HG2_PB_SVrefine2PBcRplusDovetail_10499	G	GGCTCAAACCTGTAATCCCAGCACTTTGGGAAGCTATTGGGGACAATCAATCGCTTGAGGCCAAGAATTTGAGATCAGCCTGGGCAACACAGAGAAACCTGGTTTCTATACAAAAATTTAAAAATTAGCTGGGGCTGGGTGCGGTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4255:HG2_PB_HySA_15728:HG2_PB_pbsv_8581:HG2_PB_PB10Xdip_26445:HG3_PB_pbsv_8361:HG4_PB_HySA_12697:HG3_PB_HySA_13106:HG4_PB_SVrefine2Falcon1Dovetail_5225:HG3_PB_SVrefine2PBcRDovetail_3887:HG3_PB_SVrefine2Falcon1Dovetail_5228:HG3_Ill_SVrefine2DISCOVARDovetail_6441:HG2_PB_SVrefine2PBcRplusDovetail_10499:HG2_PB_SVrefine2PB10Xhap12_6262:HG2_PB_SVrefine2Falcon2Bionano_4177:HG2_PB_SVrefine2Falcon1plusDovetail_11293:HG2_Ill_SVrefine2DISCOVARplusDovetail_12403;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12403:HG2_PB_SVrefine2Falcon1plusDovetail_11293:HG2_PB_SVrefine2Falcon2Bionano_4177:HG2_PB_SVrefine2PB10Xhap12_6262:HG2_PB_SVrefine2PBcRplusDovetail_10499:HG3_Ill_SVrefine2DISCOVARDovetail_6441:HG3_PB_SVrefine2Falcon1Dovetail_5228:HG3_PB_SVrefine2PBcRDovetail_3887:HG4_PB_SVrefine2Falcon1Dovetail_5225;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0797342;ClusterMaxSizeDiff=0.0730897;ClusterMaxEditDist=0.291391;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=145;DistBack=-145;DistForward=4;DistMin=-145;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=175;REFWIDENED=7:130908892-130909066;PctSeqSimilarity=0.9967;PctSizeSimilarity=1;PctRecOverlap=0.9586;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=98;MatchId=5145.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:37:1/1:0:22:3:13:./.:0:0:0:0:0/1:10:32:./.:.:.:.:.:.
chr7	131366246	HG2_PB_SVrefine2Falcon1plusDovetail_11295	A	ATGATGATGGTGATGATGATGAAGATGATGGTGATGGTGAAGATGATGGTGATGATGGTGATGGTGATGATGGTGATGATGGTGGTGATGATGGTGATGGTGATGATGGTGGTGATGATGGTGATGGTGATGATGGTGATGATGATGATGGTGATGATGGTGATGGTGATGATGGTGGTGATGATGATGATGGTGATGGTGATGATGGTGGTGGTGATGATGGTGATGACGGTGATGGTGATGATGGTGATGGTGGTGATGGTGATGGTGGTGATGATGGTGATGTTGGTGATGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTGATGGTGATGGTGATGATGGTGATGATGGTAATGATGGTGATGGTGATGATGGTGATGATGGTGATGGTGATGATGGTGGTGATGATGGTGATGGTGATAATGGTGGTGATGATGGTGGTGATGATGGTGGTGATGATGGTGGTGATAATGGTGATGATGGTGGTGGTGGTGATGATGGTCATGATGGTGATGATGGTGATGGTGATGATGGTGGTGATGATGGTGATGGTGATGATGGTGATGGTGATGATGGTGGTGATGGTGGTGATGATGGTGGTGATGATGATGATGGTGATGATGGTGATGGTGATGATGGTGGTGATGGTGATGATGGTGATGATGGTGATGATGATGGTGATGATGGTGATGATGGTGGTGATGATGGTGG	20	PASS	ClusterIDs=HG3_PB_pbsv_8363:HG2_PB_PB10Xdip_26448:HG4_PB_pbsv_8590:HG2_PB_pbsv_8583:HG4_PB_SVrefine2PBcRDovetail_4257:HG4_PB_SVrefine2Falcon1Dovetail_5228:HG4_PB_assemblyticsfalcon_24869:HG2_PB_assemblyticsfalcon_25451:HG2_PB_assemblyticsPBcR_24668:HG3_PB_assemblyticsfalcon_25289:HG2_PB_SVrefine2PBcRplusDovetail_10501:HG2_PB_SVrefine2PB10Xhap12_6265:HG2_PB_SVrefine2Falcon2Bionano_4180:HG2_PB_SVrefine2Falcon1plusDovetail_11295:HG3_PB_SVrefine2PBcRDovetail_3890:HG3_PB_SVrefine2Falcon1Dovetail_5231:HG2_Ill_breakscan11_3888;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11295:HG2_PB_SVrefine2Falcon2Bionano_4180:HG2_PB_SVrefine2PB10Xhap12_6265:HG2_PB_SVrefine2PBcRplusDovetail_10501;NumExactMatchSVs=4;ClusterMaxShiftDist=0.274373;ClusterMaxSizeDiff=0.274373;ClusterMaxEditDist=0.312195;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=714;DistBack=14205;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=7:131366247-131366314;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:0:15:0:15:./.:0:0:0:0:1/1:0:21:1/1:3:165:.:.:.
chr7	131524308	HG4_PB_SVrefine2Falcon1Dovetail_5229	AGTTT	TTTTAGCTTAAAGACTGAACATAGGCCGGGCGCGGTGGCTCACCCTGTAATCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAAGACCACGGTGAAACCCGTCTCTAGTAAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACGCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCAGAGCTTGCAGTGAGCGGAGATCGCGCCACAGCACTCCGCCTGGGCGACAGAACGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_5031:HG3_PB_pbsv_8364:HG2_PB_pbsv_8584:HG3_PB_assemblyticsfalcon_25292:HG2_PB_assemblyticsfalcon_25453:HG2_PB_assemblyticsPBcR_24671:HG2_Ill_GATKHCSBGrefine_5926:HG2_PB_SVrefine2PBcRplusDovetail_10502:HG2_PB_HySA_15739:HG3_PB_HySA_13115:HG3_PB_SVrefine2PBcRDovetail_3891:HG3_Ill_SVrefine2DISCOVARDovetail_6445:HG2_PB_SVrefine2Falcon2Bionano_4181:HG3_PB_SVrefine2Falcon1Dovetail_5232:HG2_PB_SVrefine2Falcon1plusDovetail_11296:HG4_PB_assemblyticsfalcon_24871:HG4_PB_SVrefine2Falcon1Dovetail_5229:HG2_Ill_MetaSV_4853;NumClusterSVs=18;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_5229:HG4_PB_assemblyticsfalcon_24871;NumExactMatchSVs=2;ClusterMaxShiftDist=0.235702;ClusterMaxSizeDiff=0.225303;ClusterMaxEditDist=0.30156;PBcalls=14;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=310;DistBack=10;DistForward=23781;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:131524313-131524307;PctSeqSimilarity=0.9873;PctSizeSimilarity=0.981;PctRecOverlap=0.9905;SizeDiff=-6;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:39:0|1:21:3:0:35:./.:0:0:0:0:0/1:36:10:0/1:8:31:.:.:.
chr7	131707188	HG2_PB_SVrefine2Falcon1plusDovetail_11297	C	CCCTCCCTTCCCCCCTTCCCTTCCTTCCCCTCCCTTCCCTTCCTTCCCCTCCCTCCCTTCCTTCCCCTTCCCTCCTTCCCTCCCTTCCCTCCCTTCCCTCCCTTCCTCCCTTCCTCCCTTTCCCTCCCTTCCTCAATTCCTTCCGTTCCCCTCCCTTCCCTCCCCTCCCTCCGTTCCCCTCACCTCCTCTCCCTTCCCCTCCCCCTTCCCCTCCCCCTTCCCCTCCCCCCTTCCCCTCCCCCCTTCCCTCCCCTTCCCTCCCCCTTCCCTCCCCCTTCCCCTCCCTCCCTTCCCCTCCCCCTTCCCCTCCCCCTTCCCCTCCCCTTCCCTCCCCCTTCCCCTCCCCCTTCCCCTCCTTCCTTCCTTCCCCCTCCTCCCTCCCTTCCTCCCTCCCTCCTCCCTCCTCTCCCTCCCTTCCTCCCCCTCCCTCCCTCCCTTCCTCCCCCCTCCTTCCTCCCCCTCCTCCTCCCCCCTCCCCCTCCCCCCTCCCCTCCCTCCCCTCCCTCCCCCTCCCCCTCCCCTCCCCTCCCCCTCCCTCCTCCCCTCCCTCTCCTCCCCCCCCTCCCTCCCTCCCCCCTCCCCCTCCCCCCCCCCTCCCCCTCCCCCTCCCTCTCCCCCCCTCCTCCCCTCCCCCTCCCCCTCCCCCCCTCCCCCTCCCCTCCCTCCTCCCTCCCTCCTCCCCCCTCCTCCCCTCCTCCCCTCCCCCTCCCCCTCCCCTCCTCCTCCCCCTCCCCCCTCCCTCCCCCCTCCCCTCCTCCCCTCCCTCCTCCCCCTCCCTCCTCCCTCCCTCCCTCCTCCCCCTCCTCCTCCCCCCTCCTCCCCCTCCTCCCCCTCCCTCCTCCCTCCTCCTCCCCCTCCTCCTTCCTCCCCCCTCTCCTTCCTCCCCCCTCCCTCCCTTCCTCCCCCCCACTCCTTCCTCCCCCCTCACTCCTTCCTCCCTCCCTCCTTCCCCCCTCTTCCTCCTCCCCCTTCCTCCCCCTTCCTTCCTCCCCCTTCCTTCCCCCCTCCCTCCTTCCCCTCCTCCCCTCCTTCCCCCTCCCTCCCCTCCTTCCCTCCTCCTCCCCCTCCTTCCCCCTCCTTCCTTCCCCCTCCTCCTCCTTCCTTCCCCCTCCTCCCTTCCTTCCCCCCTCCCTCCTTCCTTCCCCCTCCTTCCTTCCTTCCCCCTCCCTCCCTCCTTCCTTCCTTCCCCCCCTCCCTCCTTCCTTCCCCCTCCCTCCCCTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCCTCCTCCCTCCCCCTTCTTCTTCCCTCCCTTCCCCTTCTTCTTCCCTTCCCCCTTCTTTCCTTCCTCCCTCCCCCTGTCTTCCTCCCTCCCCCTTCTGTCTTTCCTCTCTCTTCTTCCTTCCTCTCTCTTCTTCCTCCCCCTCTTCTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4182:HG3_PB_pbsv_8366:HG3_PB_HySA_13118:HG2_PB_PB10Xdip_26450:HG4_PB_pbsv_8592:HG2_PB_HySA_15745:HG3_PB_assemblyticsfalcon_25294:HG2_PB_assemblyticsPBcR_24674:HG2_PB_assemblyticsfalcon_25457:HG4_PB_assemblyticsfalcon_24874:HG4_PB_SVrefine2Falcon1Dovetail_5230:HG2_PB_SVrefine2Falcon1plusDovetail_11297:HG3_PB_SVrefine2Falcon1Dovetail_5233:HG2_PB_SVrefine2PBcRplusDovetail_10503:HG2_PB_pbsv_8586:HG2_PB_SVrefine2PB10Xhap12_6267;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11297;NumExactMatchSVs=1;ClusterMaxShiftDist=0.166156;ClusterMaxSizeDiff=0.166156;ClusterMaxEditDist=0.256947;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1397;DistBack=32009;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=7:131707189-131707208;PctSeqSimilarity=0.9465;PctSizeSimilarity=0.9089;PctRecOverlap=0.9089;SizeDiff=-140;StartDistance=-18;EndDistance=-18;GTMatch=1;TruScore=92;MatchId=5149.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:35:1/1:1:19:1:11:./.:0:0:0:0:./.:1:12:0/1:15:73:.:1379:.
chr7	131758348	HG4_PB_pbsv_8593	A	ATCCATTGTCGCAGGGCCTCTTCTCTCCCCTCGCCCTTGTCCCTTCCCTTCCCCCTTCCTTCCCCCTTCCCTTCCCCGCTTCCCTTCCCCCCTTCCCCTTCCCCGCCTTTCCTTCCCCTTCCCTTTCTCGTTTTTCCCTTCCCCCTTCTTCCCCCCTTCCCTTCCCTCCCTTCCCTTCCCTTCGCCCTTCCCTTCCCCCTTCCCCTTCCCTCTCCCCTTTACCCCTTCCCTTCGCTCCTTCCCCCTTCTCTTCCCCTTCCTTCCCCCTTTCTCCCGCTTTCCCTTCCTTCCCCCTTCCCGCTTCCCTTTCCTTCCCTGTTCCCTGCTTCCTTCCCCTTCCCCTTCCCCCTTCCCCTTCCCTTCTCTTTTCTCCTCTCTCTTCTTTCCTTCCCTTCCTTCCCCTCATCCGCCCTTCCTTCCCCCGCTTCCCGCCCTTCCCTTCCCTCCCTTCCCTTCCCCTTCCCCCTGCCCTTCCCCCTTCCCTTCCCCTGCTTCCCCCATTCCCTTCCCTTCCCCCTTCCCTTTCCCCTTCCCCCTTCGCCCCTTCCCTTCCCCCTTCCCTTCCCCTCCCCTCCCCTTCCCTCCCCCTCCCTCCCCTCGCCCCCCCCCTCCTCCCCCCTCCCCCTCCCCCTCCCCCTTCCCCCTGCCCCTCGCCCCCTTCCCGCCCCCTCCCTCCCTCCCCCTCCCCCTCCCCTTCCCCTTCCTTTCTTTCCCCCTCCCTCCCCCCTCCACCCTTCCTCCCTCCTCCTTTTTTTCTTTTCTTCCTGTCACCCAGGCTGGAGTGGTAATGGCATAGTCCCTCAGCCCACTGCAACTCAGCCCTCCTGGCTCAGGTGGATCCTCCCACCTCAGCCCTCCTGAGCAGCTGGGACTTACAGGCATATGCCACTATACGCTAGCTATTTTTTTTTTAGTGATTTTTGTAGAGACAGGGTCTCCCTACGTTGGCCGGGCTTGGTCCTCAAACTCCTGGGCTCGAAAGATCCTTCTGGCCTTGGCCTCCCAAAGTGGTTGGATTATAGGTGTGAGACACCCGCACCAGGCTCAGGGCTTAATTTTCTGGTTATTATCAGACTT	20	PASS	ClusterIDs=HG3_PB_HySA_13119:HG3_PB_pbsv_8367:HG3_PB_assemblyticsfalcon_25296:HG4_PB_pbsv_8593:HG2_PB_assemblyticsfalcon_25458:HG2_PB_pbsv_8587:HG4_PB_assemblyticsfalcon_24876:HG2_PB_assemblyticsPBcR_24675:HG2_Ill_breakscan11_3889:HG2_PB_PB10Xdip_26451:HG3_PB_SVrefine2PBcRDovetail_3892:HG2_PB_SVrefine2Falcon1plusDovetail_11298:HG4_PB_SVrefine2Falcon1Dovetail_5231:HG2_PB_SVrefine2Falcon2Bionano_4183:HG2_PB_SVrefine2PBcRplusDovetail_10504:HG2_PB_SVrefine2PB10Xhap12_6268:HG2_PB_HySA_15747:HG3_PB_SVrefine2Falcon1Dovetail_5234;NumClusterSVs=18;ExactMatchIDs=HG4_PB_pbsv_8593;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0863444;ClusterMaxSizeDiff=0.0854059;ClusterMaxEditDist=0.220393;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=1076;DistBack=25342;DistForward=12099;DistMin=12099;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:131758349-131758349;PctSeqSimilarity=0.9336;PctSizeSimilarity=0.9945;PctRecOverlap=0.9935;SizeDiff=-6;StartDistance=4;EndDistance=4;GTMatch=1;TruScore=97;MatchId=5150.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:1/1:0:17:0:13:./.:0:0:0:0:1/1:0:13:0/1:20:72:.:1114:.
chr7	133387093	HG3_PB_SVrefine2Falcon1Dovetail_5243	T	CTCTTCCCTTCCCACCCCTCCCCTCCCTCCATCTCCTCCCCTCCCCTCCCTTCCCCTCCCCTCCCCCCTCCCCTCCCCTTCCCCCTCCTCTTCCCTCCCCCCTCTCCCCTCCCCTCCCCTC	20	PASS	ClusterIDs=HG4_PB_HySA_12723:HG3_PB_pbsv_8377:HG2_PB_HySA_15759:HG2_PB_pbsv_8596:HG2_PB_SVrefine2Falcon1plusDovetail_11306:HG3_PB_SVrefine2PBcRDovetail_3899:HG2_PB_SVrefine2Falcon2Bionano_4188:HG2_PB_SVrefine2PBcRplusDovetail_10509:HG2_PB_SVrefine2PB10Xhap12_6276:HG2_Ill_breakscan11_3892:HG3_PB_HySA_13125:HG3_PB_assemblyticsfalcon_25307:HG3_PB_SVrefine2Falcon1Dovetail_5243:HG4_PB_SVrefine2PBcRDovetail_4266:HG4_PB_assemblyticsfalcon_24887:HG4_PB_SVrefine2Falcon1Dovetail_5239:HG2_PB_PB10Xdip_26461:HG4_PB_pbsv_8604:HG2_PB_HySA_15758;NumClusterSVs=19;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5243:HG3_PB_assemblyticsfalcon_25307;NumExactMatchSVs=2;ClusterMaxShiftDist=0.151261;ClusterMaxSizeDiff=0.134454;ClusterMaxEditDist=0.275591;PBcalls=18;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=120;DistBack=97632;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:133387094-133387092;PctSeqSimilarity=0.9837;PctSizeSimilarity=0.9677;PctRecOverlap=0.968;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=5152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:1:22:1:18:./.:0:0:0:0:./.:2:10:./.:.:.:.:.:.
chr7	133581406	HG2_PB_SVrefine2PB10Xhap12_6277	A	ATTTTATTTATTTATTTATTCATTTATTTTTTGAGAAGGAGTCTCGCTCTGTTGCCAGGCTGGAGTGGAATGGCGCAATCTTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCATCCCCCTGAGTAGCTGGGACTACAGGGCGCGCCACCATGTCTGGCTAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5240:HG2_PB_HySA_15761:HG3_PB_HySA_13130:HG2_PB_pbsv_8598:HG3_PB_pbsv_8378:HG4_PB_HySA_12725:HG2_PB_HySA_15762:HG4_PB_pbsv_8606:HG2_PB_SVrefine2Falcon2Bionano_4190:HG2_PB_SVrefine2PB10Xhap12_6277:HG2_PB_SVrefine2Falcon1plusDovetail_11307:HG3_PB_SVrefine2Falcon1Dovetail_5244;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6277;NumExactMatchSVs=1;ClusterMaxShiftDist=0.10411;ClusterMaxSizeDiff=0.10411;ClusterMaxEditDist=0.279683;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=178;DistBack=-187;DistForward=157;DistMin=-187;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=183;REFWIDENED=7:133581407-133581589;PctSeqSimilarity=0.954;PctSizeSimilarity=0.978;PctRecOverlap=0.0164;SizeDiff=-4;StartDistance=-178;EndDistance=-178;GTMatch=0;TruScore=64;MatchId=5153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:30:0|1:21:0:1:24:./.:0:0:0:0:./.:17:2:./.:.:.:.:.:.
chr7	134424641	HG2_10X_SVrefine210Xhap12_6149	G	GCATAATTTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3893:HG3_PB_pbsv_8383:HG3_PB_HySA_13133:HG4_PB_assemblyticsfalcon_24897:HG2_PB_assemblyticsPBcR_24692:HG3_PB_assemblyticsfalcon_25317:HG2_PB_HySA_15767:HG4_PB_pbsv_8610:HG2_PB_SVrefine2Falcon1plusDovetail_11309:HG4_PB_HySA_12729:HG4_PB_SVrefine2PBcRDovetail_4270:HG2_PB_SVrefine2PB10Xhap12_6281:HG4_PB_SVrefine2Falcon1Dovetail_5244:HG2_PB_SVrefine2PBcRplusDovetail_10512:HG2_PB_SVrefine2Falcon2Bionano_4193:HG2_10X_SVrefine210Xhap12_6149:HG3_PB_SVrefine2Falcon1Dovetail_5247;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6149:HG2_PB_SVrefine2Falcon2Bionano_4193:HG2_PB_SVrefine2PBcRplusDovetail_10512:HG4_PB_SVrefine2Falcon1Dovetail_5244;NumExactMatchSVs=4;ClusterMaxShiftDist=0.173653;ClusterMaxSizeDiff=0.173653;ClusterMaxEditDist=0.276163;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=327;DistBack=11;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:134424642-134424656;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:5:41:0:13:./.:0:0:0:0:1/1:0:25:1/1:2:60:.:.:.
chr7	135785117	HG2_Ill_GATKHCSBGrefine_5947	C	CATGCAGTAAATCAAGCATCCACACAATGGGTGACATAGTGCAGGGTGGTGAAGTCAATACGGTGAGGAGGGTGTCT	20	PASS	ClusterIDs=HG2_PB_pbsv_8606:HG4_Ill_svaba_11120:HG3_PB_pbsv_8389:HG4_PB_pbsv_8617:HG4_Ill_manta_2135:HG4_Ill_Krunchall_12527:HG4_Ill_GATKHC_14230:HG4_Ill_GATKHCSBGrefine_6030:HG4_Ill_250bpfermikitraw_11850:HG4_Ill_150bpfermikitraw_11375:HG3_Ill_svaba_11110:HG3_Ill_manta_2034:HG3_Ill_Krunchall_11914:HG3_Ill_GATKHC_14164:HG3_Ill_GATKHCSBGrefine_5862:HG3_Ill_250bpfermikitraw_11558:HG2_Ill_svaba_11006:HG2_Ill_manta_2478:HG2_Ill_Krunchall_12211:HG2_Ill_GATKHC_14202:HG2_Ill_GATKHCSBGrefine_5947:HG2_Ill_250bpfermikitraw_11889:HG2_Ill_150bpfermikitraw_11191:HG3_PB_HySA_13145:HG2_PB_HySA_15777:HG4_PB_HySA_12744;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11191:HG2_Ill_250bpfermikitraw_11889:HG2_Ill_GATKHCSBGrefine_5947:HG2_Ill_GATKHC_14202:HG2_Ill_Krunchall_12211:HG2_Ill_manta_2478:HG2_Ill_svaba_11006:HG3_Ill_250bpfermikitraw_11558:HG3_Ill_GATKHCSBGrefine_5862:HG3_Ill_GATKHC_14164:HG3_Ill_Krunchall_11914:HG3_Ill_manta_2034:HG3_Ill_svaba_11110:HG4_Ill_150bpfermikitraw_11375:HG4_Ill_250bpfermikitraw_11850:HG4_Ill_GATKHCSBGrefine_6030:HG4_Ill_GATKHC_14230:HG4_Ill_Krunchall_12527:HG4_Ill_manta_2135:HG4_Ill_svaba_11120;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0886076;ClusterMaxSizeDiff=0.0506329;ClusterMaxEditDist=0.285714;PBcalls=6;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=18;DistForward=19250;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=75;REFWIDENED=7:135785051-135785125;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:32:0|1:23:3:5:33:./.:0:0:0:0:0/1:26:19:./.:.:.:.:.:.
chr7	136067468	HG4_PB_pbsv_8619	T	TAAAATTTTAACATCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCAGCACTTTGAGGCCGAGGCGGGCGATCACTGAGGTCAGGAAGATCGAGACCACTCCCTGGCTAAAACGGTGAACCCCGTCTCTACTTAAAAATATCAAAAAAAAAAAAAAATAATTGCCGGGCGTAGTGGCGGGCGCTGTAGTCCCAGTTACTGGGAGTGAGGCAGGAGAATGGCGGAACCCGGGAGAGGAGCATGCGTGAGCCGAGATTGGGCCACTGCAGCTCCAGCCTGGGCGACAGAAGCGAGACTCCGTCTTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5248:HG2_PB_pbsv_8608:HG3_PB_assemblyticsfalcon_25330:HG4_PB_assemblyticsfalcon_24909:HG4_PB_pbsv_8619:HG2_Ill_breakscan11_3894:HG4_PB_HySA_12746:HG3_PB_SVrefine2Falcon1Dovetail_5251;NumClusterSVs=8;ExactMatchIDs=HG4_PB_pbsv_8619;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0675477;ClusterMaxSizeDiff=0.0675477;ClusterMaxEditDist=0.240469;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=51197;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:136067469-136067483;PctSeqSimilarity=0.9535;PctSizeSimilarity=0.9792;PctRecOverlap=0.9763;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=5156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:0|1:26:0:3:29:./.:0:0:0:0:0/1:25:9:0/1:8:12:.:.:.
chr7	136260909	HG2_PB_SVrefine2Falcon2Bionano_4200	T	TGGGAGGGCCTTGCTCCAAAATCCTAGAGGCCTCCCCTGTGATTCACCTATGGGGGCCTGCCAAATGCTCCAAACAGCATCCCTATCTGCCACTGACACCTCAAGCACCATTGGATCTGCTGGGTCCATATGGCCCAAGTGGCAGAGCAGCTTGCACAGAAGCCTGGGCCTGTTGTAGAGCCTTCTCCTGTTCTGGACCCCACTCACAACTGGCAACCTTTCAGGTCACTCAATTAATGGGCTGGAGTAATACAGCTAAATGAGAAATGCGTTGCCTCCAAAATCCAAATAGGCCCACTAGGCGTTATGCCCCTTTTTTG	20	PASS	ClusterIDs=HG4_PB_pbsv_8621:HG3_PB_pbsv_8393:HG3_PB_SVrefine2Falcon1Dovetail_5253:HG4_PB_SVrefine2PBcRDovetail_4275:HG4_Ill_SVrefine2DISCOVARDovetail_6303:HG4_Ill_MetaSV_5087:HG3_PB_SVrefine2PBcRDovetail_3906:HG3_Ill_manta_2035:HG3_Ill_SVrefine2DISCOVARDovetail_6473:HG3_Ill_MetaSV_5042:HG3_Ill_GATKHCSBGrefine_5863:HG2_PB_SVrefine2Falcon2Bionano_4200:HG2_Ill_manta_2479:HG2_Ill_SVrefine2DISCOVARplusDovetail_12425:HG2_Ill_MetaSV_4862:HG2_10X_SVrefine210Xhap12_6159:HG2_PB_SVrefine2Falcon1plusDovetail_11313:HG4_PB_SVrefine2Falcon1Dovetail_5250:HG4_PB_HySA_12750:HG2_PB_pbsv_8610:HG4_PB_assemblyticsfalcon_24912;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6159:HG2_Ill_MetaSV_4862:HG2_Ill_SVrefine2DISCOVARplusDovetail_12425:HG2_Ill_manta_2479:HG2_PB_SVrefine2Falcon2Bionano_4200:HG3_Ill_GATKHCSBGrefine_5863:HG3_Ill_MetaSV_5042:HG3_Ill_SVrefine2DISCOVARDovetail_6473:HG3_Ill_manta_2035:HG3_PB_SVrefine2PBcRDovetail_3906:HG4_Ill_MetaSV_5087:HG4_Ill_SVrefine2DISCOVARDovetail_6303;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0772798;ClusterMaxSizeDiff=0.0710974;ClusterMaxEditDist=0.187029;PBcalls=11;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=319;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=7:136260910-136260910;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:30:0|1:37:2:2:30:./.:0:0:0:0:0/1:22:19:0/1:5:24:.:.:.
chr7	137960320	HG2_PB_SVrefine2Falcon2Bionano_4209	T	TTGCAGTGAGCCAAGATTGTGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAACAGAAAAGAAAAGAAAAAAGAAACAAGGAGAAACTGAAATAAAAAACCAACTGTCATTTATTCTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3896:HG2_PB_pbsv_8623:HG3_PB_pbsv_8407:HG4_PB_pbsv_8634:HG3_PB_assemblyticsfalcon_25356:HG2_PB_assemblyticsPBcR_24733:HG2_PB_HySA_15807:HG4_PB_HySA_12775:HG4_Ill_MetaSV_5092:HG4_Ill_SVrefine2DISCOVARDovetail_6317:HG4_PB_SVrefine2Falcon1Dovetail_5258:HG3_PB_SVrefine2Falcon1Dovetail_5262:HG3_PB_SVrefine2PBcRDovetail_3913:HG3_Ill_MetaSV_5046:HG2_PB_SVrefine2Falcon1plusDovetail_11322:HG4_Ill_GATKHCSBGrefine_6041:HG3_Ill_SVrefine2DISCOVARDovetail_6487:HG3_Ill_GATKHCSBGrefine_5875:HG2_PB_SVrefine2PBcRplusDovetail_10525:HG2_PB_SVrefine2PB10Xhap12_6295:HG2_PB_SVrefine2Falcon2Bionano_4209:HG2_Ill_GATKHCSBGrefine_5958:HG4_PB_SVrefine2PBcRDovetail_4284:HG2_PB_PB10Xdip_26477;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5958:HG2_PB_SVrefine2Falcon2Bionano_4209:HG2_PB_SVrefine2PB10Xhap12_6295:HG2_PB_SVrefine2PBcRplusDovetail_10525:HG3_Ill_GATKHCSBGrefine_5875:HG3_Ill_SVrefine2DISCOVARDovetail_6487:HG4_Ill_GATKHCSBGrefine_6041;NumExactMatchSVs=7;ClusterMaxShiftDist=0.107865;ClusterMaxSizeDiff=0.107865;ClusterMaxEditDist=0.195991;PBcalls=16;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=223;DistBack=18356;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=7:137960321-137960327;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:23:0:24:./.:0:0:0:0:1/1:1:28:./.:.:.:.:.:.
chr7	138335469	HG2_PB_SVrefine2PB10Xhap12_6298	G	GATCACTTGAGCCCAGGAGTTCGAGGCTGCAGGGAGCTGTGATCACACCAATGTACTCCAGCCTGGGTAACAGAGAGATAAGCTGTCTCTAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGAGGGCTTAGGGGTAAAATATTGGAATATATCTATTTCCTCATATATATATATATATATATATATTTTTTTTTTTTTTTTGAGTCTCACTCTGTTGCCCAGGGTGGAGTGCAGTGGCGCGATCTCAGGTTACTGCAACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGTGCATGCCACTATGCCTGGCTAATTTTTGTATTTTTAATCTAAGAGACAGAGTTTCACCATGTTGACCAGGCTCATCTCCATCTCCTGACCTCAAGTGATCCACCTGCCTTGGCATCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCTGGCCCAGTATTGGAGCATATTAGATGACCCAGGAGACATGGAAAATAATACTAGCAAGGGAGAGACATAACCAGGAAGCATGGCAAAGTAAGAGACGCAGGTGGAAGAGAAAATGTCCATAACAGGGCTTGAGTAGGACCATGCTCAGTCAATAACACCATGTGTAAGACCCAAGCACTAAGCATTAGAAGCGTGTGCCTCTAGTTTTTGTTTGTCTGGTTTTTTTTGAGACAGAGTCTCACTCTGTTGCCCAGACTCGTGTATAGTGGCACAATAAATGGCTCACTGTAGCCTCGGTCCCTTGGTCTCCTGAGCTTAAGTGATCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACGTGCCACTACACACAGCTAATTTTTTTATTTTTGTAGAGATGGAGTTCCACCATGTTGCCCAGGCTGGTCTCGAACTCCTGGGCTCAAGCAATCTGCCTGCCTCAGCCTCCCAAAGTGTTGGGATTATAGGTGTGAGCCATCGCACCCAGCCTGTGCCTCCATCTTGACAAAGATTAGAAGAGAGCTGCAGGGATTGAAAAGAATCACTATCCAGTACTTGTTAGATTCTTTTAAAACATTTTTGTCAGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGACGCAGGTGGATCACTTGAGGTCAGGAGTTAGAGACCAGCCTGGTCAACGTGGTGAAACCCCATCTCTACTAAAAATATAAAACATTAGCCAGGCATGGCAGTGCATGCCTGTAGTCCCAGCCACTCTGGAGGCAGGATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5262:HG4_PB_pbsv_8640:HG4_PB_HySA_12780:HG2_PB_HySA_15816:HG3_Ill_MetaSV_5047:HG4_Ill_MetaSV_5095:HG3_PB_HySA_13173:HG2_PB_PB10Xdip_26479:HG2_Ill_breakscan11_3897:HG2_PB_pbsv_8627:HG2_PB_SVrefine2PBcRplusDovetail_10528:HG2_PB_SVrefine2PB10Xhap12_6298:HG2_PB_SVrefine2Falcon2Bionano_4212:HG2_10X_SVrefine210Xhap12_6171:HG3_PB_SVrefine2Falcon1Dovetail_5265:HG2_PB_SVrefine2Falcon1plusDovetail_11327:HG3_PB_SVrefine2PBcRDovetail_3915:HG4_Ill_SVrefine2DISCOVARDovetail_6322:HG4_PB_SVrefine2PBcRDovetail_4288:HG2_Ill_SVrefine2DISCOVARplusDovetail_12446;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4212:HG2_PB_SVrefine2PB10Xhap12_6298:HG2_PB_SVrefine2PBcRplusDovetail_10528;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0553208;ClusterMaxSizeDiff=0.0514791;ClusterMaxEditDist=0.190548;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=1276;DistBack=6526;DistForward=52;DistMin=52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=77;REFWIDENED=7:138335470-138335546;PctSeqSimilarity=0.9944;PctSizeSimilarity=0.9992;PctRecOverlap=0.9585;SizeDiff=-1;StartDistance=-53;EndDistance=-53;GTMatch=0;TruScore=98;MatchId=5159.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:11:0:17:./.:0:0:0:0:1/1:0:18:./.:18:217:.:.:.
chr7	138402809	HG2_PB_SVrefine2PBcRplusDovetail_10529	G	GTGTCTGCGGAGGCAGACGCCCAGGAAGGAATCGGGGGTGGGAGTAGCGGTACAGTCACGGATGTCTGTGGAGGGAGACGCTCAGGAAGGAGTGGGGGGGTACAGTCACGGA	10	PASS	ClusterIDs=HG2_PB_pbsv_8628:HG2_PB_assemblyticsPBcR_24739:HG2_PB_SVrefine2Falcon1plusDovetail_11328:HG3_PB_assemblyticsfalcon_25364:HG3_PB_SVrefine2Falcon1Dovetail_5266:HG4_PB_SVrefine2PBcRDovetail_4289:HG2_PB_SVrefine2PBcRplusDovetail_10529:HG2_PB_SVrefine2PB10Xhap12_6299:HG2_PB_PB10Xdip_26480:HG2_PB_HySA_15817:HG4_PB_HySA_12781;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6299:HG2_PB_SVrefine2PBcRplusDovetail_10529:HG4_PB_SVrefine2PBcRDovetail_4289;NumExactMatchSVs=3;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.316742;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=111;DistBack=24490;DistForward=38;DistMin=38;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=7:138402750-138402815;PctSeqSimilarity=0.986;PctSizeSimilarity=0.9911;PctRecOverlap=0.7257;SizeDiff=-1;StartDistance=30;EndDistance=30;GTMatch=0;TruScore=90;MatchId=5160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:25:./.:8:18:15:4:./.:0:0:0:0:./.:0:5:./.:.:.:.:.:.
chr7	138604891	HG2_PB_SVrefine2Falcon1plusDovetail_11330	T	TTGTCACCCCTGCCTGGAATGCCCTTCCCCAGCTCTCTATATGGATGGATCCTCTCACCCCCACCTGGAATGCCCTTCCCCAGCTCTCTATATGGATGGATCCTCTCACCCCCGCCTGGAATGCCCTTCCCCAGCTCTCTATATGGATGGATCCTCTCAGCCCCGCCTGGAATGCCCTTCCCCAGCTCTCTATATGGATGGATCCTCTCACCCCCGCCTGGAATGCCCTTCCCCAGCTCTCTATATGGATGGATCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3898:HG4_PB_pbsv_8645:HG3_PB_pbsv_8415:HG2_PB_pbsv_8630:HG2_PB_SVrefine2Falcon2Bionano_4214:HG2_PB_SVrefine2Falcon1plusDovetail_11330:HG3_PB_SVrefine2PBcRDovetail_3917:HG2_Ill_SVrefine2DISCOVARplusDovetail_12448:HG4_PB_HySA_12785:HG2_PB_HySA_15820:HG3_PB_HySA_13177;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11330:HG2_PB_SVrefine2Falcon2Bionano_4214;NumExactMatchSVs=2;ClusterMaxShiftDist=0.291667;ClusterMaxSizeDiff=0.291667;ClusterMaxEditDist=0.3375;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=255;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=102;REFWIDENED=7:138604892-138604993;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:27:0|1:32:3:0:24:./.:0:0:0:0:0/1:25:10:./.:.:.:.:.:.
chr7	138786179	HG3_Ill_SVrefine2DISCOVARDovetail_6493	C	CGGGGAGCGCCTCTGCCCTGCCGCCCCGTCTGGGATGTGAGGAGCGCCTTTGCCCGGCCGCGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCTGCACTGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCGCCCCGTCTGAGAAATGAGAAGCCCCTCCGCCCGGCAGCCGCCCCGTCTGGGAAGTGAGGAGCGTCTCCGACCGGCAGCCACTCCGTCAGGGAGGGAGGTGGGGGTCAGCCCGCGCCCGGCCAGCCGCCCCGCCCGGGAGGGAGGTGGGAGTCAGTCCCTGCCCGGCCGCCGCCCTGTCCGGAGGGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11332:HG3_PB_pbsv_8417:HG3_PB_HySA_13179:HG2_PB_pbsv_8632:HG4_Ill_GATKHCSBGrefine_6050:HG4_PB_pbsv_8647:HG3_Ill_GATKHCSBGrefine_5880:HG2_Ill_GATKHCSBGrefine_5963:HG2_PB_HySA_15822:HG3_PB_HySA_13178:HG2_PB_PB10Xdip_26484:HG4_PB_SVrefine2Falcon1Dovetail_5265:HG4_PB_SVrefine2PBcRDovetail_4291:HG4_Ill_SVrefine2DISCOVARDovetail_6325:HG3_PB_SVrefine2PBcRDovetail_3919:HG3_PB_SVrefine2Falcon1Dovetail_5268:HG3_Ill_SVrefine2DISCOVARDovetail_6493:HG2_PB_SVrefine2PBcRplusDovetail_10533:HG2_PB_SVrefine2PB10Xhap12_6303:HG2_PB_SVrefine2Falcon2Bionano_4216:HG2_Ill_SVrefine2DISCOVARplusDovetail_12450:HG2_10X_SVrefine210Xhap12_6176;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6176:HG2_Ill_SVrefine2DISCOVARplusDovetail_12450:HG2_PB_SVrefine2Falcon2Bionano_4216:HG2_PB_SVrefine2PB10Xhap12_6303:HG2_PB_SVrefine2PBcRplusDovetail_10533:HG3_Ill_SVrefine2DISCOVARDovetail_6493:HG3_PB_SVrefine2Falcon1Dovetail_5268:HG3_PB_SVrefine2PBcRDovetail_3919:HG4_Ill_SVrefine2DISCOVARDovetail_6325:HG4_PB_SVrefine2PBcRDovetail_4291;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0433604;ClusterMaxSizeDiff=0.0433604;ClusterMaxEditDist=0.235135;PBcalls=15;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=365;DistBack=652;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=78;REFWIDENED=7:138786180-138786257;PctSeqSimilarity=0.9939;PctSizeSimilarity=1;PctRecOverlap=0.8767;SizeDiff=0;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=95;MatchId=5162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:./.:0:9:0:3:./.:0:0:0:0:1/1:0:18:1/1:2:48:.:.:.
chr7	138791615	HG3_PB_SVrefine2Falcon1Dovetail_5269	TTG	GCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAACACATTGGAGTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4217:HG3_PB_assemblyticsfalcon_25367:HG3_PB_SVrefine2Falcon1Dovetail_5269:HG3_PB_HySA_13180:HG2_PB_pbsv_8633:HG2_Ill_breakscan11_3899:HG3_PB_pbsv_8418:HG3_PB_SVrefine2PBcRDovetail_3920:HG4_PB_SVrefine2Falcon1Dovetail_5266:HG2_PB_SVrefine2Falcon1plusDovetail_11333;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5269:HG3_PB_assemblyticsfalcon_25367;NumExactMatchSVs=2;ClusterMaxShiftDist=0.156522;ClusterMaxSizeDiff=0.156522;ClusterMaxEditDist=0.261348;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=346;DistBack=3;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=7:138791598-138791614;PctSeqSimilarity=0.975;PctSizeSimilarity=0.9595;PctRecOverlap=0.9226;SizeDiff=14;StartDistance=18;EndDistance=20;GTMatch=0;TruScore=95;MatchId=5163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:0|1:19:3:0:20:./.:0:0:0:0:0/1:43:18:0/1:9:40:.:.:.
chr7	139130539	HG2_Ill_manta_2492	G	ATATATATATGTATATATATATATATATATGTATATATATATATATGTATATATATATGTGTATATATATATATGTATATATATATATGTGTATATATATATGTGTATATATATATATATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_8649:HG4_PB_HySA_12787:HG4_Ill_manta_2146:HG2_Ill_manta_2492:HG2_Ill_MetaSV_4872:HG2_PB_pbsv_8635:HG2_PB_HySA_15824;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_manta_2492:HG4_Ill_manta_2146;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0787402;ClusterMaxSizeDiff=0.0629921;ClusterMaxEditDist=0.194553;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=122;DistBack=25;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=7:139130540-139130538;PctSeqSimilarity=0.9963;PctSizeSimilarity=1;PctRecOverlap=0.9024;SizeDiff=0;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=96;MatchId=5164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:18:0|1:27:1:3:14:./.:0:0:0:0:0/1:26:12:./.:.:.:.:.:.
chr7	139469037	HG3_Ill_Krunchall_11948	A	ACTCCACGGCCGCAGTGCCTTCCACCGCACCACAAGGCCTCCCAGCATGGCCCACCTCCAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4296:HG3_PB_pbsv_8419:HG3_PB_HySA_13181:HG4_PB_pbsv_8651:HG2_PB_PB10Xdip_26492:HG4_Ill_GATKHC_14274:HG4_Ill_250bpfermikitraw_11881:HG3_Ill_Krunchall_11948:HG3_Ill_250bpfermikitraw_11590:HG2_Ill_Krunchall_12256:HG2_Ill_GATKHC_14246:HG2_Ill_250bpfermikitraw_11921:HG4_PB_HySA_12788:HG2_PB_HySA_15826:HG4_Ill_SVrefine2DISCOVARDovetail_6327:HG3_PB_SVrefine2Falcon1Dovetail_5271:HG3_Ill_SVrefine2DISCOVARDovetail_6496:HG2_PB_SVrefine2PB10Xhap12_6308:HG2_Ill_SVrefine2DISCOVARplusDovetail_12453;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11921:HG2_Ill_GATKHC_14246:HG2_Ill_Krunchall_12256:HG3_Ill_250bpfermikitraw_11590:HG3_Ill_Krunchall_11948:HG4_Ill_250bpfermikitraw_11881:HG4_Ill_GATKHC_14274;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0840336;ClusterMaxSizeDiff=0.0840336;ClusterMaxEditDist=0.285714;PBcalls=9;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=-101;DistForward=1;DistMin=-101;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=119;REFWIDENED=7:139469034-139469152;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:31:0|1:31:4:0:27:./.:0:0:0:0:0/1:17:13:./.:.:.:.:.:.
chr7	139933396	HG4_Ill_GATKHCSBGrefine_6058	T	TAAGTCAAATAGATTATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCCCGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_15831:HG4_PB_pbsv_8656:HG2_PB_pbsv_8644:HG3_PB_assemblyticsfalcon_25373:HG2_PB_assemblyticsfalcon_25542:HG3_PB_pbsv_8421:HG2_PB_SVrefine2Falcon2Bionano_4220:HG3_PB_SVrefine2Falcon1Dovetail_5272:HG4_Ill_MetaSV_5101:HG4_Ill_GATKHCSBGrefine_6058:HG2_10X_SVrefine210Xhap12_6187:HG2_PB_SVrefine2Falcon1plusDovetail_11338:HG4_PB_SVrefine2Falcon1Dovetail_5267;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6187:HG4_Ill_GATKHCSBGrefine_6058:HG4_Ill_MetaSV_5101;NumExactMatchSVs=3;ClusterMaxShiftDist=0.165049;ClusterMaxSizeDiff=0.165049;ClusterMaxEditDist=0.227642;PBcalls=10;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=316;DistBack=38546;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=7:139933397-139933413;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:22:./.:4:16:9:4:./.:0:0:0:0:0/1:20:8:0/1:9:25:.:.:.
chr7	141211135	HG2_PB_SVrefine2PB10Xhap12_6318	A	AGGGGAGGGGAAGGGAAGGGGGGATGGGGAAGGGAGCGGAGGAGGGAGAAGGAGGGGGAGGGGGAGGGGAGGAGGAGGGGGAGGGGGGACGGGAGGAGGAG	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_24964:HG2_PB_PB10Xdip_26507:HG2_PB_pbsv_8652:HG3_PB_pbsv_8428:HG2_PB_HySA_15839:HG2_PB_assemblyticsPBcR_24766:HG2_PB_assemblyticsfalcon_25553:HG4_PB_SVrefine2PBcRDovetail_4300:HG3_PB_HySA_13185:HG4_PB_HySA_12797:HG4_Ill_svaba_11155:HG3_PB_SVrefine2PBcRDovetail_3925:HG3_PB_SVrefine2Falcon1Dovetail_5282:HG3_Ill_svaba_11144:HG3_Ill_SVrefine2DISCOVARDovetail_6503:HG2_PB_SVrefine2PBcRplusDovetail_10541:HG2_PB_SVrefine2PB10Xhap12_6318:HG2_PB_SVrefine2Falcon2Bionano_4227:HG2_Ill_svaba_11038:HG2_Ill_SVrefine2DISCOVARplusDovetail_12459:HG2_10X_SVrefine210Xhap12_6196:HG2_PB_SVrefine2Falcon1plusDovetail_11344:HG4_PB_SVrefine2Falcon1Dovetail_5275:HG4_PB_pbsv_8664:HG2_Ill_breakscan11_3900:HG3_PB_assemblyticsfalcon_25388;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6196:HG2_Ill_SVrefine2DISCOVARplusDovetail_12459:HG2_Ill_svaba_11038:HG2_PB_SVrefine2Falcon2Bionano_4227:HG2_PB_SVrefine2PB10Xhap12_6318:HG2_PB_SVrefine2PBcRplusDovetail_10541:HG3_Ill_SVrefine2DISCOVARDovetail_6503:HG3_Ill_svaba_11144:HG3_PB_SVrefine2Falcon1Dovetail_5282:HG3_PB_SVrefine2PBcRDovetail_3925:HG4_Ill_svaba_11155:HG4_PB_SVrefine2PBcRDovetail_4300;NumExactMatchSVs=12;ClusterMaxShiftDist=0.237113;ClusterMaxSizeDiff=0.237113;ClusterMaxEditDist=0.263158;PBcalls=19;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=100;DistBack=649;DistForward=21785;DistMin=649;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=7:141211136-141211144;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:./.:3:36:0:0:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr7	142521343	HG2_Ill_GATKHCSBGrefine_5977	A	AAAATGCCACTGGAAATTTCATAGAGATTGCATTCAATCTGTAGATGACTTTGGGTAGTGTGGACATTTTCACAATATTGACCCTTCTGATCTGTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4305:HG4_PB_assemblyticsfalcon_24975:HG2_PB_pbsv_8657:HG4_PB_SVrefine2Falcon1Dovetail_5281:HG4_PB_pbsv_8670:HG4_Ill_Krunchall_12580:HG2_10X_SVrefine210Xhap12_6208:HG4_Ill_GATKHCSBGrefine_6073:HG4_Ill_250bpfermikitraw_11899:HG2_Ill_Krunchall_12278:HG2_Ill_GATKHCSBGrefine_5977:HG2_Ill_250bpfermikitraw_11938;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11938:HG2_Ill_GATKHCSBGrefine_5977:HG2_Ill_Krunchall_12278:HG4_Ill_250bpfermikitraw_11899:HG4_Ill_GATKHCSBGrefine_6073:HG4_Ill_Krunchall_12580:HG4_PB_SVrefine2Falcon1Dovetail_5281;NumExactMatchSVs=7;ClusterMaxShiftDist=0.109453;ClusterMaxSizeDiff=0.109453;ClusterMaxEditDist=0.273171;PBcalls=5;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=95;DistBack=26810;DistForward=6507;DistMin=6507;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=105;REFWIDENED=7:142521336-142521440;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:25:0|1:38:1:2:23:./.:0:0:0:0:0/1:14:15:./.:.:.:.:.:.
chr7	142587869	HG3_PB_SVrefine2PBcRDovetail_3929	A	ATGCACACACACACACCTGCAGACACACACATGCACACACACACCTGCAGACACACACACACCTACAGACACACACACAACCTGCAGACACACACACACCTACATATACACACCTGCAGACACACACACACCTGCAGACACACACACACCTGCAGACACACACCTGCAGACACACACACACCTACAGACACACACACACCTGCAGACACACACATGCACACACACACC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5282:HG2_PB_PB10Xdip_26518:HG2_PB_pbsv_8658:HG4_PB_SVrefine2PBcRDovetail_4306:HG3_PB_SVrefine2PBcRDovetail_3929:HG3_PB_SVrefine2Falcon1Dovetail_5286:HG2_PB_SVrefine2PBcRplusDovetail_10548:HG2_PB_SVrefine2PB10Xhap12_6326:HG2_PB_SVrefine2Falcon2Bionano_4232:HG2_PB_SVrefine2Falcon1plusDovetail_11350;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11350:HG2_PB_SVrefine2Falcon2Bionano_4232:HG2_PB_SVrefine2PB10Xhap12_6326:HG2_PB_SVrefine2PBcRplusDovetail_10548:HG3_PB_SVrefine2Falcon1Dovetail_5286:HG3_PB_SVrefine2PBcRDovetail_3929:HG4_PB_SVrefine2PBcRDovetail_4306;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0723404;ClusterMaxSizeDiff=0.0634249;ClusterMaxEditDist=0.204255;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=227;DistBack=31683;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=141;REFWIDENED=7:142587870-142588010;PctSeqSimilarity=0.9496;PctSizeSimilarity=1;PctRecOverlap=0.4317;SizeDiff=0;StartDistance=-129;EndDistance=-129;GTMatch=0;TruScore=79;MatchId=5169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:37:./.:0:3:2:30:./.:0:0:0:0:1/1:0:19:./.:.:.:.:.:.
chr7	145425773	HG3_Ill_svaba_11170	T	TAAAAAGGCAATTCTTGCCCCTTATATAGATGTGAGGAACATAATTATCACC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_26682:HG2_PB_pbsv_8671:HG3_PB_HySA_13207:HG4_PB_pbsv_8682:HG4_Ill_svaba_11184:HG4_PB_assemblyticsfalcon_24992:HG4_Ill_scalpel_8248:HG3_PB_pbsv_8448:HG4_Ill_Krunchall_12601:HG4_Ill_GATKHC_14327:HG4_Ill_GATKHCSBGrefine_6086:HG4_Ill_250bpfermikitraw_11918:HG4_Ill_150bpfermikitraw_11441:HG3_Ill_svaba_11170:HG3_Ill_scalpel_8584:HG3_Ill_manta_2049:HG3_Ill_Krunchall_11983:HG3_Ill_GATKHC_14254:HG3_Ill_GATKHCSBGrefine_5903:HG3_Ill_250bpfermikitraw_11622:HG3_Ill_150bpfermikitraw_11321:HG2_Ill_svaba_11063:HG2_Ill_scalpel_8467:HG2_Ill_manta_2504:HG2_Ill_Krunchall_12299:HG2_Ill_GATKHC_14290:HG2_Ill_GATKHCSBGrefine_5988:HG2_Ill_250bpfermikitraw_11960:HG2_Ill_150bpfermikitraw_11257:HG4_PB_HySA_12817:HG2_PB_HySA_15866;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11257:HG2_Ill_250bpfermikitraw_11960:HG2_Ill_GATKHCSBGrefine_5988:HG2_Ill_GATKHC_14290:HG2_Ill_Krunchall_12299:HG2_Ill_manta_2504:HG2_Ill_scalpel_8467:HG2_Ill_svaba_11063:HG3_Ill_150bpfermikitraw_11321:HG3_Ill_250bpfermikitraw_11622:HG3_Ill_GATKHCSBGrefine_5903:HG3_Ill_GATKHC_14254:HG3_Ill_Krunchall_11983:HG3_Ill_manta_2049:HG3_Ill_scalpel_8584:HG3_Ill_svaba_11170:HG4_Ill_150bpfermikitraw_11441:HG4_Ill_250bpfermikitraw_11918:HG4_Ill_GATKHCSBGrefine_6086:HG4_Ill_GATKHC_14327:HG4_Ill_Krunchall_12601:HG4_Ill_scalpel_8248:HG4_Ill_svaba_11184;NumExactMatchSVs=23;ClusterMaxShiftDist=0.28;ClusterMaxSizeDiff=0.28;ClusterMaxEditDist=0.363636;PBcalls=8;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=0;DistForward=23890;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=53;REFWIDENED=7:145425774-145425826;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:5:23:1:21:./.:0:0:0:0:1/1:1:55:./.:.:.:.:.:.
chr7	146422762	HG2_PB_SVrefine2PBcRplusDovetail_10559	T	TTCAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCGACCCCACCACAGTCCCCAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGA	20	PASS	ClusterIDs=HG2_PB_HySA_15872:HG2_PB_pbsv_8675:HG2_PB_SVrefine2PBcRplusDovetail_10559:HG2_PB_assemblyticsPBcR_24801:HG2_PB_SVrefine2Falcon1plusDovetail_11358:HG3_PB_SVrefine2Falcon1Dovetail_5296:HG4_PB_pbsv_8686:HG4_Ill_MetaSV_5112;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_10559;NumExactMatchSVs=1;ClusterMaxShiftDist=0.235887;ClusterMaxSizeDiff=0.235887;ClusterMaxEditDist=0.247984;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=453;DistBack=-12;DistForward=97096;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=7:146422763-146422774;PctSeqSimilarity=0.9424;PctSizeSimilarity=0.89;PctRecOverlap=0.89;SizeDiff=-56;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=90;MatchId=5172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:50:29:0|1:34:5:0:17:./.:0:0:0:0:0/0:34:0:0/1:6:30:.:.:.
chr7	147585775	HG4_Ill_GATKHCSBGrefine_6092	T	TGACCATTGACTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_12832:HG4_PB_pbsv_8692:HG2_PB_pbsv_8682:HG3_PB_SVrefine2Falcon1Dovetail_5298:HG2_PB_SVrefine2PB10Xhap12_6344:HG2_PB_assemblyticsPBcR_24813:HG2_PB_SVrefine2PBcRplusDovetail_10562:HG2_PB_SVrefine2Falcon1plusDovetail_11360:HG2_Ill_MetaSV_4888:HG4_Ill_MetaSV_5114:HG4_Ill_GATKHCSBGrefine_6092:HG4_PB_SVrefine2PBcRDovetail_4320:HG2_PB_HySA_15881;NumClusterSVs=13;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_6092:HG4_Ill_MetaSV_5114;NumExactMatchSVs=2;ClusterMaxShiftDist=0.27379;ClusterMaxSizeDiff=0.27379;ClusterMaxEditDist=0.304858;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=35;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:147585776-147585790;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5173.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:39:0|1:42:0:0:35:./.:0:0:0:0:0/1:25:7:0/1:7:30:.:.:.
chr7	148178647	HG4_PB_SVrefine2Falcon1Dovetail_5296	AGTAC	GCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAGGCCGAGGCGGGCGATCATGAGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTACAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGACAGAGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11365:HG2_PB_PB10Xdip_26708:HG2_PB_SVrefine2PB10Xhap12_6349:HG2_PB_SVrefine2PB10Xhap12_6348:HG4_PB_assemblyticsfalcon_25011:HG4_PB_SVrefine2Falcon1Dovetail_5296:HG2_PB_pbsv_8686:HG4_PB_pbsv_8696:HG2_PB_assemblyticsPBcR_24821:HG2_PB_SVrefine2PBcRplusDovetail_10566;NumClusterSVs=10;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_5296:HG4_PB_assemblyticsfalcon_25011;NumExactMatchSVs=2;ClusterMaxShiftDist=0.260032;ClusterMaxSizeDiff=0.260032;ClusterMaxEditDist=0.295345;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=332;DistBack=1;DistForward=48091;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=7:148178636-148178646;PctSeqSimilarity=0.9858;PctSizeSimilarity=0.9822;PctRecOverlap=0.9558;SizeDiff=-6;StartDistance=12;EndDistance=16;GTMatch=0;TruScore=97;MatchId=5174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:43:0|1:23:5:6:32:./.:0:0:0:0:0/1:21:20:0/1:7:30:.:.:.
chr7	148633308	HG2_PB_SVrefine2PBcRplusDovetail_10568	A	AGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAAGTGAGCAAACTGCTTGAGCTCAGGAGTTCGAGACCAGCCTGGGCAACCTGGCAAAACCCCGTCTCTACAAAAAAAGTACAAAAATTAGGCCGGAAGCAGTGGCTCACTCGTGTAATCCCAGCACTTTGGGAGACCTAGGTGGGCAGACCACTTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGTGAAACCCTGTCTCTACTAATAATACAAAAATTAACCGGGCGTGGTGGTAAGTGCCTATAATCCCAGCTACTCAGGAGGCTGAGGCATGAGAATTGCTTGAACCTGGGAGGTGGAGATTTCAGTAAGCCAAGACTGCACTACTGCACTCCAGCCTGGGCAATATAGCGAGCCTCAGTTGAAAAAAAAAAAAAAAAAAACCGCCAGGTGAG	20	PASS	ClusterIDs=HG3_PB_pbsv_8465:HG3_PB_HySA_13234:HG2_PB_pbsv_8691:HG4_PB_pbsv_8699:HG2_PB_PB10Xdip_26711:HG4_Ill_MetaSV_5117:HG2_Ill_MetaSV_4890:HG4_Ill_GATKHCSBGrefine_6096:HG3_Ill_MetaSV_5068:HG2_Ill_GATKHCSBGrefine_6004:HG2_PB_HySA_15896:HG4_PB_SVrefine2Falcon1Dovetail_5298:HG3_PB_SVrefine2Falcon1Dovetail_5305:HG3_Ill_SVrefine2DISCOVARDovetail_6539:HG2_PB_SVrefine2PBcRplusDovetail_10568:HG2_PB_SVrefine2PB10Xhap12_6353:HG2_Ill_SVrefine2DISCOVARplusDovetail_12488:HG2_10X_SVrefine210Xhap12_6232:HG3_PB_SVrefine2PBcRDovetail_3949:HG2_PB_SVrefine2Falcon1plusDovetail_11368:HG2_PB_SVrefine2Falcon2Bionano_4246;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6232:HG2_Ill_SVrefine2DISCOVARplusDovetail_12488:HG2_PB_SVrefine2PB10Xhap12_6353:HG2_PB_SVrefine2PBcRplusDovetail_10568:HG3_Ill_SVrefine2DISCOVARDovetail_6539:HG3_PB_SVrefine2Falcon1Dovetail_5305;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0599334;ClusterMaxSizeDiff=0.0576497;ClusterMaxEditDist=0.229834;PBcalls=13;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=439;DistBack=24775;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=125;REFWIDENED=7:148633309-148633433;PctSeqSimilarity=0.9978;PctSizeSimilarity=1;PctRecOverlap=0.9772;SizeDiff=0;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=99;MatchId=5176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:0:17:2:32:./.:0:0:0:0:1/1:0:25:1/1:3:80:.:.:.
chr7	150039582	HG2_Ill_scalpel_8487	T	TCATGTAACTTCATGGCTCTCTCTGAACTTCTGTTTCTTTATCTGTAAGATGGGGA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11286:HG3_PB_pbsv_8480:HG3_Ill_svaba_11206:HG2_PB_pbsv_8704:HG2_PB_HySA_15917:HG3_Ill_scalpel_8608:HG3_Ill_Krunchall_12023:HG3_Ill_GATKHC_14302:HG3_Ill_GATKHCSBGrefine_5924:HG3_Ill_250bpfermikitraw_11660:HG3_Ill_150bpfermikitraw_11357:HG2_Ill_svaba_11096:HG2_Ill_scalpel_8487:HG2_Ill_Krunchall_12330:HG2_Ill_GATKHC_14331:HG2_Ill_GATKHCSBGrefine_6012:HG2_Ill_250bpfermikitraw_11988;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11286:HG3_Ill_svaba_11206:HG3_Ill_scalpel_8608:HG3_Ill_Krunchall_12023:HG3_Ill_GATKHC_14302:HG3_Ill_GATKHCSBGrefine_5924:HG3_Ill_250bpfermikitraw_11660:HG3_Ill_150bpfermikitraw_11357:HG2_Ill_svaba_11096:HG2_Ill_scalpel_8487:HG2_Ill_Krunchall_12330:HG2_Ill_GATKHC_14331:HG2_Ill_GATKHCSBGrefine_6012:HG2_Ill_250bpfermikitraw_11988;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.315789;PBcalls=3;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=74913;DistForward=4669;DistMin=4669;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=7:150039583-150039637;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:27:0|1:28:1:2:24:./.:0:0:0:0:0/1:17:22:./.:.:.:.:.:.
chr7	150574036	HG2_PB_SVrefine2PB10Xhap12_6366	C	CTCCCCCCACCCCCCGCCTTTCCCCCACCCCCCGCCTTCCCCCCACCCCCGCCTTCCCCCCACCCCCCGCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4254:HG3_PB_pbsv_8483:HG2_PB_HySA_15927:HG2_PB_pbsv_8707:HG2_10X_SVrefine210Xhap12_6245:HG3_PB_HySA_13267:HG2_PB_PB10Xdip_26721:HG4_PB_pbsv_8718:HG2_PB_SVrefine2PBcRplusDovetail_10575:HG2_PB_SVrefine2PB10Xhap12_6366:HG4_PB_SVrefine2PBcRDovetail_4333;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6366:HG2_PB_SVrefine2PBcRplusDovetail_10575;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0958904;ClusterMaxSizeDiff=0.0939597;ClusterMaxEditDist=0.231293;PBcalls=10;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=15539;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=7:150574037-150574091;PctSeqSimilarity=0.9753;PctSizeSimilarity=0.9467;PctRecOverlap=0.88;SizeDiff=-4;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=93;MatchId=5178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:71:1/1:2:39:2:32:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr7	150607757	HG3_PB_SVrefine2Falcon1Dovetail_5312	T	GTGTGTGTGGTGGTGTGTGTGTGTGGTGTGTATGTGGTGTGTATGTGGTGTGTGGTGTGTGTGTGTGGTGTGTGGTGTGTGTGTGGTGTGTGTGTGTGTGGTGTGTGGTGTGTGGTGTGGTGTGGTGTTGTGGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGGTGTGTGGGTGTGTGTTGTGTGTGTGTGTGGTGTGTGGTGTGTGTGTGGTGGTGTGTGTGGTGTGTGTGGGTGTGTGTGTGGTGTGTGGTGGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGGGGTGTGTGTGGGGTGTGTGTGGGGTGTGTGTGGGTGTGTGTGTGTGGTGTGTGTGTGGTGGTGTGGTGTGTGTGTGTGCGGTGTGTGTGCGGTGTGGTGTGGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGTGGGTGTGTGTGTGTGGTGTGTGGTGTGTGTGTGGTGTATGTGGTGTGTTGTGTGTGGTGTGTGGTGTGTGGTGTGTGGTGTGTGTTGTGGTGTGTGTGGTGTGTGTGGGTGGTGTTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGTGTGTGTGTGGTGTGTGTGTATGGTGTGTGTGTGGTGTGGTGTGGTGTATGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGTGTGTGGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4255:HG3_PB_assemblyticsfalcon_25444:HG3_PB_SVrefine2Falcon1Dovetail_5312:HG2_PB_SVrefine2PB10Xhap12_6367;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5312:HG3_PB_assemblyticsfalcon_25444;NumExactMatchSVs=2;ClusterMaxShiftDist=0.176751;ClusterMaxSizeDiff=0.169952;ClusterMaxEditDist=0.232495;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=797;DistBack=380;DistForward=51962;DistMin=380;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=967;REFWIDENED=7:150606790-150607756;PctSeqSimilarity=0.9608;PctSizeSimilarity=0.9987;PctRecOverlap=0.4341;SizeDiff=1;StartDistance=451;EndDistance=451;GTMatch=0;TruScore=79;MatchId=5179.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:31:0|1:37:1:2:27:./.:0:0:0:0:0/0:9:1:0/1:20:26:.:.:.
chr7	152237527	HG3_Ill_GATKHC_14334	G	GCTGGTCTAGAATTCCCGACCTCAGGTGATCTGCCTGCCTAGGCCTCCCAACGTGCTGGGATTACAGGCATGAGCCACTGTGCCTGGCCTGTGTTTTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6257:HG4_PB_pbsv_8740:HG3_PB_pbsv_8497:HG3_PB_HySA_13299:HG4_Ill_manta_2166:HG4_Ill_MetaSV_5133:HG4_Ill_GATKHC_14403:HG4_Ill_GATKHCSBGrefine_6113:HG4_Ill_250bpfermikitraw_11981:HG4_Ill_150bpfermikitraw_11500:HG3_Ill_manta_2061:HG3_Ill_MetaSV_5077:HG3_Ill_GATKHC_14334:HG3_Ill_GATKHCSBGrefine_5936:HG3_Ill_250bpfermikitraw_11687:HG3_Ill_150bpfermikitraw_11384:HG2_Ill_MetaSV_4900:HG2_Ill_GATKHC_14369:HG2_Ill_GATKHCSBGrefine_6024:HG2_Ill_250bpfermikitraw_12020:HG2_Ill_150bpfermikitraw_11311:HG2_PB_PB10Xdip_26749:HG2_PB_pbsv_8723:HG2_PB_HySA_15971:HG4_PB_HySA_12888:HG4_PB_SVrefine2PBcRDovetail_4344:HG4_PB_SVrefine2Falcon1Dovetail_5304:HG3_PB_SVrefine2PBcRDovetail_3953:HG3_PB_SVrefine2Falcon1Dovetail_5322:HG3_Ill_SVrefine2DISCOVARDovetail_6556:HG2_PB_SVrefine2PBcRplusDovetail_10583:HG2_PB_SVrefine2PB10Xhap12_6382:HG2_PB_SVrefine2Falcon2Bionano_4263:HG2_PB_SVrefine2Falcon1plusDovetail_11387:HG2_Ill_SVrefine2DISCOVARplusDovetail_12494;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11311:HG2_Ill_250bpfermikitraw_12020:HG2_Ill_GATKHCSBGrefine_6024:HG2_Ill_GATKHC_14369:HG2_Ill_MetaSV_4900:HG3_Ill_150bpfermikitraw_11384:HG3_Ill_250bpfermikitraw_11687:HG3_Ill_GATKHCSBGrefine_5936:HG3_Ill_GATKHC_14334:HG3_Ill_MetaSV_5077:HG3_Ill_manta_2061:HG4_Ill_150bpfermikitraw_11500:HG4_Ill_250bpfermikitraw_11981:HG4_Ill_GATKHCSBGrefine_6113:HG4_Ill_GATKHC_14403:HG4_Ill_MetaSV_5133:HG4_Ill_manta_2166;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0948905;ClusterMaxSizeDiff=0.0875912;ClusterMaxEditDist=0.172662;PBcalls=15;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=131;DistBack=-86;DistForward=15374;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=128;REFWIDENED=7:152237487-152237614;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:43:1/1:1:13:0:6:./.:0:0:0:0:1/1:1:23:./.:.:.:.:.:.
chr7	152267243	HG2_PB_pbsv_8724	A	AAATAAGCAAACATGCCGGGCGCAAGTGGCTCACGCCTTAATCCAACACTTTGCGGAGGCCGAGGCGGGTGGATCATTGAGGTCAGGAGATCGAACCATTCCTGGCTAACAAGGTGGAAAACCCCGTCTCTACTAAAAAATACAAAAATTAGCGGGGCGCGCGTGGCGGGCGCCTGTAGTCCCAGATACTCGGAGCGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCACTGGGCGACAGAGCGCAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_26750:HG3_PB_pbsv_8498:HG4_PB_pbsv_8741:HG2_PB_pbsv_8724:HG3_PB_SVrefine2Falcon1Dovetail_5323:HG4_PB_SVrefine2Falcon1Dovetail_5305:HG2_PB_SVrefine2Falcon1plusDovetail_11388:HG4_PB_SVrefine2PBcRDovetail_4345:HG2_PB_SVrefine2PB10Xhap12_6383:HG4_PB_HySA_12889:HG2_PB_HySA_15972;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_8724;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0384047;ClusterMaxSizeDiff=0.0384047;ClusterMaxEditDist=0.197349;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=344;DistBack=-308;DistForward=77;DistMin=-308;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=316;REFWIDENED=7:152267244-152267559;PctSeqSimilarity=0.9681;PctSizeSimilarity=0.9797;PctRecOverlap=0.9768;SizeDiff=7;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=97;MatchId=5181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:15:40:0|1:14:2:1:38:./.:0:0:0:0:./.:37:2:0/1:7:17:.:.:.
chr7	152271248	HG3_PB_SVrefine2Falcon1Dovetail_5324	GTGC	ACCTGCCACCAAGTCCAGCTAATTTTTGTAGTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTCCAGAGAGAGTCTCGCTCTGTCGTCAGGCTGGGGTGCAGTGGTGCTATCTTGGCTCACTGCAACCTCCGCCTACCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGGACTACAGGCGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6258:HG4_PB_assemblyticsfalcon_25064:HG4_PB_SVrefine2Falcon1Dovetail_5306:HG3_PB_assemblyticsfalcon_25469:HG3_PB_SVrefine2Falcon1Dovetail_5324:HG4_PB_pbsv_8742:HG2_Ill_MetaSV_4901:HG2_PB_pbsv_8725:HG4_PB_HySA_12890:HG3_PB_pbsv_8499:HG2_PB_HySA_15973:HG3_PB_SVrefine2PBcRDovetail_3954:HG4_PB_SVrefine2PBcRDovetail_4346:HG2_PB_SVrefine2Falcon1plusDovetail_11389;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5324:HG3_PB_assemblyticsfalcon_25469:HG4_PB_SVrefine2Falcon1Dovetail_5306:HG4_PB_assemblyticsfalcon_25064;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0913706;ClusterMaxSizeDiff=0.0913706;ClusterMaxEditDist=0.272494;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=190;DistBack=157;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1027;REFWIDENED=7:152281090-152271247;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.9948;PctRecOverlap=0.9433;SizeDiff=-1;StartDistance=8;EndDistance=11;GTMatch=0;TruScore=97;MatchId=5182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:32:0|1:24:2:0:30:./.:0:0:0:0:0/1:27:14:./.:.:.:.:.:.
chr7	152796366	HG3_PB_SVrefine2PBcRDovetail_3959	T	TAGCCACCATGGAAGTGTGCCCCCCACACAGACCTCAGCCACCATGGAGGCGAACCCCACACAGACCTCAGCCACAATGGAGGTGAACTCCACACACAGACCTCAGCCACCATGGAAGTGAACCCCACACACAGACCTCAGCCATCACGGAGGTGAACCCCACACATAGACCTCAGCCACCATGGAGGTGAACTCCACACGCAGACCTC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5330:HG4_PB_pbsv_8750:HG3_PB_pbsv_8507:HG4_PB_HySA_12901:HG3_PB_HySA_13306:HG2_PB_HySA_15990:HG4_Ill_MetaSV_5137:HG4_Ill_GATKHC_14414:HG4_Ill_GATKHCSBGrefine_6120:HG3_Ill_GATKHC_14346:HG3_Ill_GATKHCSBGrefine_5942:HG2_Ill_manta_2520:HG2_Ill_GATKHC_14377:HG2_Ill_GATKHCSBGrefine_6031:HG2_PB_PB10Xdip_26754:HG2_PB_pbsv_8733:HG2_PB_SVrefine2Falcon1plusDovetail_11394:HG4_PB_SVrefine2PBcRDovetail_4352:HG4_PB_SVrefine2Falcon1Dovetail_5311:HG4_Ill_SVrefine2DISCOVARDovetail_6369:HG3_PB_SVrefine2PBcRDovetail_3959:HG3_Ill_SVrefine2DISCOVARDovetail_6561:HG2_PB_SVrefine2PBcRplusDovetail_10592:HG2_PB_SVrefine2PB10Xhap12_6391:HG2_PB_SVrefine2Falcon2Bionano_4268:HG2_Ill_SVrefine2DISCOVARplusDovetail_12497:HG2_10X_SVrefine210Xhap12_6265;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6265:HG2_Ill_SVrefine2DISCOVARplusDovetail_12497:HG2_PB_SVrefine2Falcon2Bionano_4268:HG2_PB_SVrefine2PB10Xhap12_6391:HG2_PB_SVrefine2PBcRplusDovetail_10592:HG3_Ill_SVrefine2DISCOVARDovetail_6561:HG3_PB_SVrefine2PBcRDovetail_3959:HG4_Ill_SVrefine2DISCOVARDovetail_6369:HG4_PB_SVrefine2Falcon1Dovetail_5311:HG4_PB_SVrefine2PBcRDovetail_4352;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0532688;ClusterMaxSizeDiff=0.0435835;ClusterMaxEditDist=0.19759;PBcalls=15;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=208;DistBack=24614;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=286;REFWIDENED=7:152796367-152796652;PctSeqSimilarity=0.9712;PctSizeSimilarity=0.9712;PctRecOverlap=0.0622;SizeDiff=6;StartDistance=-193;EndDistance=-193;GTMatch=0;TruScore=66;MatchId=5184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:26:0:23:./.:0:0:0:0:./.:0:3:./.:.:.:.:.:.
chr7	153321861	HG2_Ill_svaba_11140	C	CATTAGGTGTGTTATCATCTATCTACCTATCTATATATCTAGCTGTGTATATCTGTTTATATATTGCCTTGCTGAATAAATTTAA	20	PASS	ClusterIDs=HG2_PB_pbsv_8741:HG4_PB_pbsv_8757:HG2_PB_HySA_15999:HG3_PB_pbsv_8514:HG4_PB_assemblyticsfalcon_25079:HG4_Ill_svaba_11264:HG4_Ill_manta_2173:HG4_Ill_Krunchall_12679:HG4_Ill_GATKHC_14419:HG4_Ill_GATKHCSBGrefine_6125:HG4_Ill_Cortex_3552:HG4_Ill_250bpfermikitraw_11997:HG4_Ill_150bpfermikitraw_11512:HG3_Ill_svaba_11249:HG3_Ill_manta_2068:HG3_Ill_Spiral_9428:HG3_Ill_Krunchall_12068:HG3_Ill_GATKHC_14350:HG3_Ill_GATKHCSBGrefine_5954:HG3_Ill_Cortex_3572:HG3_Ill_250bpfermikitraw_11700:HG3_Ill_150bpfermikitraw_11398:HG2_Ill_svaba_11140:HG2_Ill_manta_2526:HG2_Ill_SpiralSDKrefine_16430:HG2_Ill_Krunchall_12379:HG2_Ill_GATKHC_14382:HG2_Ill_GATKHCSBGrefine_6042:HG2_Ill_Cortex_8630:HG2_Ill_250bpfermikitraw_12035:HG2_Ill_150bpfermikitraw_11325:HG2_PB_PB10Xdip_26763:HG2_Ill_breakscan11_3907;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11325:HG2_Ill_250bpfermikitraw_12035:HG2_Ill_Cortex_8630:HG2_Ill_GATKHCSBGrefine_6042:HG2_Ill_GATKHC_14382:HG2_Ill_Krunchall_12379:HG2_Ill_SpiralSDKrefine_16430:HG2_Ill_manta_2526:HG2_Ill_svaba_11140:HG3_Ill_150bpfermikitraw_11398:HG3_Ill_250bpfermikitraw_11700:HG3_Ill_Cortex_3572:HG3_Ill_GATKHCSBGrefine_5954:HG3_Ill_GATKHC_14350:HG3_Ill_Krunchall_12068:HG3_Ill_Spiral_9428:HG3_Ill_manta_2068:HG3_Ill_svaba_11249:HG4_Ill_150bpfermikitraw_11512:HG4_Ill_250bpfermikitraw_11997:HG4_Ill_Cortex_3552:HG4_Ill_GATKHCSBGrefine_6125:HG4_Ill_GATKHC_14419:HG4_Ill_Krunchall_12679:HG4_Ill_manta_2173:HG4_Ill_svaba_11264:HG4_PB_assemblyticsfalcon_25079;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0804598;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.244444;PBcalls=6;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=7:153321860-153321862;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:2:25:0:12:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr7	154113834	HG4_Ill_GATKHCSBGrefine_6129	T	TTGAATAAATATGAGTAATAAATATGAATAAATAAATAAAATAAATATGAATATTTAATAAATAAATAAATAAATAAATAAA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11332:HG4_PB_pbsv_8764:HG2_PB_pbsv_8747:HG2_PB_HySA_16022:HG4_PB_SVrefine2PBcRDovetail_4360:HG4_Ill_manta_2174:HG4_Ill_SVrefine2DISCOVARDovetail_6375:HG4_Ill_GATKHC_14435:HG4_Ill_GATKHCSBGrefine_6129:HG4_Ill_250bpfermikitraw_12011:HG4_Ill_150bpfermikitraw_11524:HG2_Ill_manta_2528:HG2_Ill_SpiralSDKrefine_16444:HG2_Ill_Krunchall_12390:HG2_Ill_GATKHC_14393:HG2_Ill_GATKHCSBGrefine_6046:HG2_Ill_250bpfermikitraw_12044;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11332:HG4_PB_SVrefine2PBcRDovetail_4360:HG4_Ill_manta_2174:HG4_Ill_SVrefine2DISCOVARDovetail_6375:HG4_Ill_GATKHC_14435:HG4_Ill_GATKHCSBGrefine_6129:HG4_Ill_250bpfermikitraw_12011:HG4_Ill_150bpfermikitraw_11524:HG2_Ill_manta_2528:HG2_Ill_SpiralSDKrefine_16444:HG2_Ill_Krunchall_12390:HG2_Ill_GATKHC_14393:HG2_Ill_GATKHCSBGrefine_6046:HG2_Ill_250bpfermikitraw_12044;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0598802;ClusterMaxSizeDiff=0.0359281;ClusterMaxEditDist=0.16568;PBcalls=4;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=81;DistBack=1;DistForward=14692;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=7:154113835-154113851;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:25:./.:9:9:12:14:./.:0:0:0:0:0/1:29:21:./.:.:.:.:.:.
chr7	154382265	HG3_PB_SVrefine2Falcon1Dovetail_5335	A	ATGGAGTTTAACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG2_PB_HySA_16023:HG3_PB_pbsv_8521:HG3_PB_assemblyticsfalcon_25494:HG4_PB_pbsv_8766:HG2_PB_HySA_16024:HG2_PB_pbsv_8748:HG4_PB_HySA_12933:HG2_PB_SVrefine2Falcon1plusDovetail_11398:HG4_PB_SVrefine2Falcon1Dovetail_5316:HG3_PB_SVrefine2Falcon1Dovetail_5335:HG3_PB_HySA_13335;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5335;NumExactMatchSVs=1;ClusterMaxShiftDist=0.11276;ClusterMaxSizeDiff=0.11276;ClusterMaxEditDist=0.201133;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=330;DistBack=30;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:154382266-154382280;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.9851;PctRecOverlap=0.9881;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:26:0|1:30:1:0:22:./.:0:0:0:0:0/1:29:6:0/1:6:22:.:.:.
chr7	154586521	HG4_Ill_scalpel_8314	T	TGGGCCCCCCCACCCCCACCCCCACCCCCACCCCCACCCCACGCTGCTCCATCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6278:HG2_PB_SVrefine2Falcon1plusDovetail_11407:HG2_PB_pbsv_8761:HG4_PB_HySA_12949:HG2_PB_HySA_16041:HG4_PB_pbsv_8778:HG4_Ill_svaba_11276:HG3_Ill_svaba_11262:HG2_Ill_svaba_11150:HG4_PB_SVrefine2Falcon1Dovetail_5322:HG3_PB_pbsv_8537:HG4_Ill_scalpel_8314:HG4_Ill_GATKHCSBGrefine_6134:HG4_Ill_250bpfermikitraw_12016:HG3_PB_SVrefine2PBcRDovetail_3968:HG3_Ill_scalpel_8654:HG3_Ill_Spiral_9442:HG3_Ill_SVrefine2DISCOVARDovetail_6569:HG3_Ill_GATKHC_14372:HG3_Ill_GATKHCSBGrefine_5963:HG3_Ill_FB_7816:HG3_Ill_250bpfermikitraw_11714:HG2_PB_SVrefine2Falcon2Bionano_4281:HG2_Ill_scalpel_8528:HG4_Ill_Krunchall_12695:HG4_Ill_GATKHC_14440:HG4_Ill_FB_7884:HG3_PB_SVrefine2Falcon1Dovetail_5343:HG2_PB_SVrefine2PBcRplusDovetail_10608:HG2_PB_SVrefine2PB10Xhap12_6410:HG2_Ill_SVrefine2DISCOVARplusDovetail_12508:HG2_Ill_GATKHC_14400:HG2_Ill_GATKHCSBGrefine_6051:HG2_Ill_FB_7904:HG2_Ill_250bpfermikitraw_12051:HG2_Ill_150bpfermikitraw_11338;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_scalpel_8528:HG2_PB_SVrefine2Falcon2Bionano_4281:HG3_Ill_250bpfermikitraw_11714:HG3_Ill_FB_7816:HG3_Ill_GATKHCSBGrefine_5963:HG3_Ill_GATKHC_14372:HG3_Ill_SVrefine2DISCOVARDovetail_6569:HG3_Ill_Spiral_9442:HG3_Ill_scalpel_8654:HG3_PB_SVrefine2PBcRDovetail_3968:HG4_Ill_250bpfermikitraw_12016:HG4_Ill_GATKHCSBGrefine_6134:HG4_Ill_scalpel_8314:HG4_PB_SVrefine2Falcon1Dovetail_5322;NumExactMatchSVs=14;ClusterMaxShiftDist=0.192308;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.259259;PBcalls=12;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=53;DistBack=15531;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=7:154586522-154586529;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:1:30:3:27:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr7	154858206	HG2_Ill_MetaSV_4911	A	AGTAACATAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_16045:HG2_PB_pbsv_8763:HG3_PB_assemblyticsfalcon_25507:HG4_PB_pbsv_8780:HG3_Ill_MetaSV_5084:HG3_PB_pbsv_8539:HG3_Ill_GATKHCSBGrefine_5966:HG2_PB_SVrefine2Falcon2Bionano_4282:HG2_Ill_MetaSV_4911:HG2_PB_SVrefine2PBcRplusDovetail_10610:HG2_PB_PB10Xdip_26788:HG2_PB_SVrefine2PB10Xhap12_6413:HG4_Ill_GATKHCSBGrefine_6138:HG2_PB_SVrefine2Falcon1plusDovetail_11408:HG3_PB_SVrefine2Falcon1Dovetail_5345:HG4_Ill_MetaSV_5143:HG4_PB_SVrefine2Falcon1Dovetail_5323:HG3_PB_HySA_13351:HG4_PB_HySA_12951:HG2_Ill_breakscan11_3909;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_MetaSV_4911:HG2_PB_SVrefine2Falcon2Bionano_4282:HG3_Ill_GATKHCSBGrefine_5966:HG3_Ill_MetaSV_5084;NumExactMatchSVs=4;ClusterMaxShiftDist=0.27551;ClusterMaxSizeDiff=0.272109;ClusterMaxEditDist=0.320819;PBcalls=14;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=321;DistBack=25417;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=7:154858207-154858220;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:41:1|0:4:36:30:8:./.:0:0:0:0:0/1:32:7:1/1:4:61:.:.:.
chr7	154888615	HG4_Ill_150bpfermikitraw_11529	A	ATCCCAGACGGGGCAGCGGGGCAGAGGGGCTCCTCACTTCCCAGATGGGGCAGCCGGGCAGAGGCACCCCCCACC	20	PASS	ClusterIDs=HG3_PB_HySA_13354:HG4_PB_pbsv_8783:HG2_PB_pbsv_8766:HG4_PB_HySA_12953:HG4_Ill_svaba_11279:HG3_Ill_svaba_11268:HG2_Ill_svaba_11155:HG4_Ill_scalpel_8317:HG3_PB_pbsv_8543:HG4_Ill_manta_2178:HG4_Ill_Krunchall_12700:HG4_Ill_GATKHC_14445:HG4_Ill_GATKHCSBGrefine_6139:HG4_Ill_150bpfermikitraw_11529:HG3_Ill_GATKHC_14380:HG2_Ill_scalpel_8531:HG2_Ill_SpiralSDKrefine_16451:HG2_Ill_Krunchall_12401:HG2_Ill_GATKHC_14406:HG2_Ill_GATKHCSBGrefine_6054:HG2_Ill_250bpfermikitraw_12056:HG2_PB_PB10Xdip_26790;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12056:HG2_Ill_GATKHCSBGrefine_6054:HG2_Ill_GATKHC_14406:HG2_Ill_Krunchall_12401:HG2_Ill_SpiralSDKrefine_16451:HG2_Ill_scalpel_8531:HG3_Ill_GATKHC_14380:HG4_Ill_150bpfermikitraw_11529:HG4_Ill_GATKHCSBGrefine_6139:HG4_Ill_GATKHC_14445:HG4_Ill_Krunchall_12700:HG4_Ill_manta_2178:HG4_Ill_scalpel_8317;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.307692;PBcalls=6;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=5427;DistForward=47;DistMin=47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=186;REFWIDENED=7:154888535-154888720;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:./.:0:0:0:0:./.:0:0:0:0:1/1:1:26:./.:.:.:.:.:.
chr7	155109716	HG3_PB_SVrefine2Falcon1Dovetail_5349	G	GACCATTGTCATCACTATCATCATCACCATCACTATCATCACCATCATTATCACCATCATTGTCACCATCATCATCACCATCACCTTCACTATCATCACATCACTATCATCATCATCATCACCATCACTATCACCATCATCACCATCATAATCATCACCATCATCATCACCATCATCGTCACCATTATCATCATCATCACCACCACCTTCACTATTGTCATCATCATCATAATCATCATGATCATCACCATTGCTATCATCATCATCATCACCATCATCACCTTCACTATCATCACCATTCACCATCGCTATCATTATCATTACCATCATCACCATCATCACCATCATCATCATCACCATCACTGTCATCATCATCCTCATCATCACTATCACCACCACCACCATCATCATCAAATCATCACCATCATGATCATCACCACCATCATCATTGTCACCACCACCATCACTATCATCACCATCATCACCATTATAATCATCATCACCACCACCATCACTATCATCACCATCATCACCATTATAATCATCATCATCATCACCATCACCATCACTATCATCACAATCATCACCATTATAATCATCATCACCATCACCATCACTATCATCACGATCATC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4372:HG4_PB_HySA_12963:HG2_PB_pbsv_8774:HG3_PB_HySA_13366:HG4_PB_pbsv_8791:HG3_PB_SVrefine2PBcRDovetail_3973:HG3_Ill_SVrefine2DISCOVARDovetail_6573:HG4_PB_SVrefine2Falcon1Dovetail_5328:HG3_PB_SVrefine2Falcon1Dovetail_5349:HG2_PB_SVrefine2PBcRplusDovetail_10616:HG2_PB_SVrefine2PB10Xhap12_6422:HG2_PB_SVrefine2Falcon2Bionano_4286:HG2_PB_SVrefine2Falcon1plusDovetail_11413:HG2_Ill_SVrefine2DISCOVARplusDovetail_12512;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11413:HG2_PB_SVrefine2Falcon2Bionano_4286:HG2_PB_SVrefine2PB10Xhap12_6422:HG2_PB_SVrefine2PBcRplusDovetail_10616:HG3_PB_SVrefine2Falcon1Dovetail_5349:HG4_PB_SVrefine2Falcon1Dovetail_5328;NumExactMatchSVs=6;ClusterMaxShiftDist=0.113973;ClusterMaxSizeDiff=0.113973;ClusterMaxEditDist=0.198283;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=632;DistBack=54169;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=587;REFWIDENED=7:155109717-155110303;PctSeqSimilarity=0.9747;PctSizeSimilarity=0.9814;PctRecOverlap=0.7535;SizeDiff=-12;StartDistance=-153;EndDistance=-153;GTMatch=0;TruScore=90;MatchId=5192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:./.:0:0:0:0:./.:0:0:0:0:1/1:0:11:1/1:3:116:.:2008:.
chr7	155574831	HG2_Ill_SVrefine2DISCOVARplusDovetail_12514	C	CCCTGCTGTGCCCTGTGATGGGCCGGCTTCCCCTCTCACCCGGATGCTGGTGTTGGTGTCTGTGCTGGGGTTCGGGGGTCGCTGGTGACCAGCTCCAG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12514:HG4_PB_HySA_12976:HG2_PB_pbsv_8784:HG4_PB_pbsv_8802:HG4_PB_SVrefine2PBcRDovetail_4377;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12514:HG4_PB_SVrefine2PBcRDovetail_4377;NumExactMatchSVs=2;ClusterMaxShiftDist=0.07;ClusterMaxSizeDiff=0.04;ClusterMaxEditDist=0.326733;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=97;DistBack=22614;DistForward=9877;DistMin=9877;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=197;REFWIDENED=7:155574832-155575028;PctSeqSimilarity=0.9863;PctSizeSimilarity=0.9898;PctRecOverlap=0.8788;SizeDiff=-1;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=95;MatchId=5195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:25:1|0:1:19:22:1:./.:0:0:0:0:0/1:26:9:./.:.:.:.:.:.
chr7	155584709	HG2_PB_SVrefine2Falcon2Bionano_4293	T	TCTCCCTCTCTCCATAATCCCACCCTCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCCCCTCTCCATAATCCCTCCCTCTCCATAATCCCTCCCTCTCTCCATAATCCCTCCCCCTCTCTGTAATCCCCCTCTCCATAATCCCTCCCTCTGTAATCCCTCCCTTTCCATAATCCCCCCCTCTCTGTCATCCTCCCTCTCTCCGTAATCCCCCCTCTCCGTAATCCCCCCTCTCTCCGTAATCCCTCCCTCTCTCCATAATCCCTCCCTCTCTCTGTAATCCTCCCTCTCCATAATCCCTCCCTCTCCATAATCCCTCCCTCTCTCCATAATCCCTCCCCCTCTCCGTAATCCCCCCTCTCCATAATCCCCCCTCTCTCTGTAATCCCCCTCTCCGTAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCATAATCCCTCCCTCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCTCCTTTTCCATAATCCCCCCTCTCTCTGTCATCCTCCCTCTCTCCGTAATCCCCCCTCTCTCCGTAATCCCCCTCTCTGTAATCCCTCCCTCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCCATAATCCCCTCTCTCCATAATCCCTCCCTCTCTCTGTAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCATAATCCCTCCCTCTCTCCGTAATACCCCTCTCCGTAATCCCCCCTCCATAATCCCTCCCTCTCTCCGTAATCCCCCTCTCCGTAATCCCCCCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCGTAATCACCCTCTCCATAATCCCCCCTGTCTCTGTAATCCTCCCTCTCTCCGTAATCCCCCTCTCTCCGTAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCCGTAATCCCTCCCTCTCTCCATAATCCCCCCTCTCTCCATAATCCCTCCCTCTCCGTAATCCCTCCCTCTCTCCATAATCCCCCCTCTCTCCATAATCCCTCCCTCTCCGTAATCCCTTCCTCTCTCCATAATCCCCCCTCTCTCCATAATCCCTCCCTCTCCGTAATCCCTCCCTCTCTCCATAATCCCCCCTCTCTCCATAATCCCTCCCTCTCTCCATAATCCCACCCTCTCTCCATAATCCCCCCTCTCTCCATAATCCCTCCCTCTCTCCATAATCCCGCCCTCTCTCCATAATCCCCCCTCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCGTAATCCCCCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCCCTCTCCATAATCCCCCCTCTCCATAATCCCCCCTCTCTCTGTAATCCTCCCTCTCTCCGTAATCCCTCCCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCATAACCCCCTCTCTCCATAATCCCTCCCTCTCTCCGTAATCCCTCCCTCTCTCCGTAATCCCCTCTCTCCATAATCCCTCCCTCTCCGTAATCCCTCCCTCTCTCCATAATCCCCCCTCTCTCCATAATCCCTCCCTCTCTCCATAATCCCACCCTCTCTCCATAATCCCCCCTCTCTCCATAATCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11420:HG3_PB_SVrefine2Falcon1Dovetail_5362:HG3_PB_pbsv_8566:HG4_PB_pbsv_8803:HG4_PB_SVrefine2Falcon1Dovetail_5336:HG2_PB_SVrefine2PBcRplusDovetail_10622:HG2_PB_SVrefine2PB10Xhap12_6430:HG2_PB_SVrefine2Falcon2Bionano_4293:HG3_PB_SVrefine2PBcRDovetail_3976;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4293:HG2_PB_SVrefine2PB10Xhap12_6430;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0779896;ClusterMaxSizeDiff=0.0779896;ClusterMaxEditDist=0.179931;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1731;DistBack=9877;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=126;REFWIDENED=7:155584710-155584835;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9977;PctRecOverlap=0.9521;SizeDiff=4;StartDistance=-81;EndDistance=-81;GTMatch=0;TruScore=98;MatchId=5196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:0:21:4:19:./.:0:0:0:0:1/1:0:10:1/1:6:159:.:1865:.
chr7	155652203	HG2_Ill_GATKHC_14424	A	ATCTCTGTATCTGTATCTGCATCTGTATCTGTATCTATCTTTGTATCTGTATCTATGTCTGCATCTGTATCTGTCTCTGTATCTGCATCTGTTTTTGCATCTATCTCTGTATCTGCATCTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3910:HG4_Ill_GATKHC_14466:HG4_Ill_GATKHC_14465:HG2_Ill_GATKHC_14424:HG2_Ill_GATKHCSBGrefine_6061:HG2_PB_HySA_16085;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6061:HG2_Ill_GATKHC_14424:HG4_Ill_GATKHC_14465;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0590717;ClusterMaxSizeDiff=0.0590717;ClusterMaxEditDist=0.0595745;PBcalls=1;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=120;DistBack=4;DistForward=34;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=355;REFWIDENED=7:155652075-155652429;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:./.:20:1:12:19:./.:0:0:0:0:0/1:25:13:./.:.:.:.:.:.
chr7	155739377	HG2_PB_SVrefine2PB10Xhap12_6438	T	TTCTTTCTTTCTTTCTTTCTTTCCCTCTTTCCTTCCTTCATTCCTTTTTCCCCTCCCTCACTCCCTCTTTCTTTCTTTCTCTTTCTTTGTTTCTTCTTTCTCTTTCCTTCCTTCCTTCCTTCTCTTTCTTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCTCTCCCTCCCTCCCTCCCCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTCTTTCTTTCTTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCTCTCCCTCCCTCACTCCC	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_6388:HG4_PB_pbsv_8815:HG2_PB_pbsv_8796:HG3_PB_pbsv_8575:HG2_PB_HySA_16099:HG2_Ill_MetaSV_4915:HG4_Ill_MetaSV_5152:HG3_PB_SVrefine2PBcRDovetail_3980:HG2_10X_SVrefine210Xhap12_6292:HG2_PB_SVrefine2PBcRplusDovetail_10626:HG2_PB_SVrefine2PB10Xhap12_6438:HG4_PB_SVrefine2PBcRDovetail_4382:HG4_PB_SVrefine2Falcon1Dovetail_5341:HG2_PB_SVrefine2Falcon2Bionano_4299:HG2_PB_SVrefine2Falcon1plusDovetail_11427:HG3_PB_SVrefine2Falcon1Dovetail_5367:HG3_Ill_SVrefine2DISCOVARDovetail_6582;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6438:HG2_PB_SVrefine2PBcRplusDovetail_10626;NumExactMatchSVs=2;ClusterMaxShiftDist=0.145191;ClusterMaxSizeDiff=0.0980036;ClusterMaxEditDist=0.266423;PBcalls=12;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=277;DistBack=-243;DistForward=121;DistMin=-243;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=243;REFWIDENED=7:155739378-155739620;PctSeqSimilarity=0.9862;PctSizeSimilarity=0.9719;PctRecOverlap=0.5719;SizeDiff=-8;StartDistance=-118;EndDistance=-118;GTMatch=0;TruScore=84;MatchId=5199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:40:1/1:2:22:2:18:./.:0:0:0:0:1/1:2:38:./.:.:.:.:.:.
chr7	155785817	HG2_PB_SVrefine2Falcon1plusDovetail_11428	G	GGCCCGTGTCCATGGTGGTCGTGGCTGCCACTCGGCCCTCTGTGTTCCTCATTCCTGCCTCCATCAGCCGCTGCTGTAGTCTAAGGTGCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11428:HG2_PB_HySA_16101:HG4_PB_assemblyticsfalcon_25132:HG4_PB_SVrefine2Falcon1Dovetail_5342:HG2_PB_PB10Xdip_26828:HG4_PB_pbsv_8816:HG3_PB_SVrefine2Falcon1Dovetail_5368:HG3_PB_pbsv_8576:HG2_PB_pbsv_8797:HG2_PB_SVrefine2PBcRplusDovetail_10627:HG2_PB_SVrefine2PB10Xhap12_6439:HG2_PB_SVrefine2Falcon2Bionano_4300;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11428:HG2_PB_SVrefine2PBcRplusDovetail_10627:HG2_PB_SVrefine2PB10Xhap12_6439:HG2_PB_SVrefine2Falcon2Bionano_4300;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0879121;ClusterMaxSizeDiff=0.0659341;ClusterMaxEditDist=0.296703;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=89;DistBack=2705;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=457;REFWIDENED=7:155785818-155786274;PctSeqSimilarity=0.9749;PctSizeSimilarity=0.9889;PctRecOverlap=0.2308;SizeDiff=-1;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=73;MatchId=5200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:40:0|1:22:2:2:36:./.:0:0:0:0:0/0:23:2:./.:.:.:.:.:.
chr7	155893994	HG3_Ill_SVrefine2DISCOVARDovetail_6584	G	GTGTGTGCATGTGTGTATGTCTTTGTGTGTATGTGTGTGTCTGGTGTGCGTGTGTGTGTACATGTGTGTCTGTGTGGGTATGTTTGTATGTGTCTGGTGTGCCTGTGTTTGTACGTGTGTGTCTGTGTGGGTATGTTTGTATGTGTCTGGTGTGCGTGTTTGTGTACATGTTTGTGTGTGTCGTGTGCAAGTGCATGTGTGTACATGTGTGTGTCTGGTGTGTGTGTCTGTGTCTGTATGTGTGTGCATGTGTGAGTATCTGTGTGTGTGTCTGGTGAGCATGTGTGTGTCCAGTGTGTGTGTGTACATGTGTGTCTGTATCTGGTGTACATATATGTGTCTGTGTGTACGTGTGTGTGCATTTATGTGTGTCTGCGTCTGCTGTACGTGGGTGTGTGTACATGTGTGTGCATGTGTGTGTCTGGCGTACGTGTTTGTGTCTGGTATATATGTGTGGGTGTCTGGCATATGTGTGTGAGTGTCTGGTGTATGTGTGTGCATGTGTGTGTGTCTGGTGTGTCTGTGTGTGTCTGCTGTATGCATGTGTATACA	20	PASS	ClusterIDs=HG2_PB_pbsv_8798:HG4_PB_HySA_12982:HG3_PB_pbsv_8577:HG2_PB_PB10Xdip_26829:HG4_PB_SVrefine2Falcon1Dovetail_5343:HG4_Ill_MetaSV_5153:HG3_Ill_MetaSV_5089:HG4_PB_SVrefine2PBcRDovetail_4384:HG4_Ill_SVrefine2DISCOVARDovetail_6389:HG4_Ill_GATKHCSBGrefine_6151:HG3_PB_SVrefine2PBcRDovetail_3981:HG3_Ill_SVrefine2DISCOVARDovetail_6584:HG3_Ill_GATKHCSBGrefine_5976:HG2_PB_SVrefine2PBcRplusDovetail_10628:HG2_PB_SVrefine2PB10Xhap12_6440:HG2_PB_SVrefine2Falcon2Bionano_4301:HG2_Ill_SVrefine2DISCOVARplusDovetail_12519:HG2_Ill_MetaSV_4916:HG2_Ill_GATKHCSBGrefine_6063:HG3_PB_SVrefine2Falcon1Dovetail_5369:HG2_PB_SVrefine2Falcon1plusDovetail_11429:HG4_PB_pbsv_8817;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6063:HG2_Ill_MetaSV_4916:HG2_Ill_SVrefine2DISCOVARplusDovetail_12519:HG2_PB_SVrefine2Falcon2Bionano_4301:HG2_PB_SVrefine2PB10Xhap12_6440:HG2_PB_SVrefine2PBcRplusDovetail_10628:HG3_Ill_GATKHCSBGrefine_5976:HG3_Ill_SVrefine2DISCOVARDovetail_6584:HG3_PB_SVrefine2PBcRDovetail_3981:HG4_Ill_GATKHCSBGrefine_6151;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0688438;ClusterMaxSizeDiff=0.0582524;ClusterMaxEditDist=0.239862;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=551;DistBack=48051;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=7:155893995-155894049;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:1:17:0:20:./.:0:0:0:0:1/1:0:12:1/1:1:121:.:.:.
chr7	155913346	HG2_PB_SVrefine2PBcRplusDovetail_10629	A	AGGGAGATACAGAGATGGCGAGGCGCTTCTTCACGTGTCCCACCTGCTCTGATCTGCTCCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6441:HG2_PB_pbsv_8799:HG2_PB_HySA_16102:HG2_PB_PB10Xdip_26835:HG3_PB_pbsv_8578:HG4_PB_assemblyticsfalcon_25134:HG3_PB_HySA_13391:HG3_Ill_SVrefine2DISCOVARDovetail_6585:HG4_PB_HySA_12985:HG2_PB_SVrefine2PBcRplusDovetail_10629:HG2_Ill_250bpfermikitraw_12081;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12081:HG2_PB_SVrefine2PBcRplusDovetail_10629:HG3_Ill_SVrefine2DISCOVARDovetail_6585:HG4_PB_assemblyticsfalcon_25134;NumExactMatchSVs=4;ClusterMaxShiftDist=0.147541;ClusterMaxSizeDiff=0.131148;ClusterMaxEditDist=0.357724;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=61;DistBack=8265;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=185;REFWIDENED=7:155913347-155913531;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5202.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:30:1|0:3:30:17:2:./.:0:0:0:0:0/1:30:7:./.:.:.:.:.:.
chr7	156140813	HG3_PB_HySA_13400	T	TGGGCTCTCGGGCTGGCACTGCGGCTGCGTGGCTCTCGGGCTGGCACTGCGGCTGGGTGGCTCTCGGGCTGGCACTGCGGCTGGGTG	10	PASS	ClusterIDs=HG2_PB_HySA_16116:HG2_PB_pbsv_8806:HG3_PB_HySA_13400:HG2_PB_PB10Xdip_26838:HG3_PB_pbsv_8584;NumClusterSVs=5;ExactMatchIDs=HG3_PB_HySA_13400;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0346821;ClusterMaxSizeDiff=0.0231214;ClusterMaxEditDist=0.264368;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=86;DistBack=3;DistForward=5404;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=253;REFWIDENED=7:156140602-156140854;PctSeqSimilarity=0.967;PctSizeSimilarity=1;PctRecOverlap=0.954;SizeDiff=0;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=97;MatchId=5203.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:39:1/1:0:10:0:20:./.:0:0:0:0:0/0:9:0:./.:.:.:.:.:.
chr7	156389841	HG2_PB_SVrefine2Falcon2Bionano_4305	T	TCATGACTGGCAATTGAGGGGTGGGTTCCAGGGCACTATGCCCCATGGCTGGCAATTGAGGGGCAAGCTAGGGGGTGCTATGCCCCATGGCTGGCAATTGAGGGGTGAGTTAGGGGGTGCTATGCCCCATGGCTGGCAATTGAGGGGCAAGCTAGGGGGTGCTATGCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11435:HG2_PB_PB10Xdip_26839:HG2_PB_pbsv_8808:HG4_PB_pbsv_8828:HG3_PB_pbsv_8586:HG3_PB_SVrefine2Falcon1Dovetail_5373:HG2_PB_SVrefine2PBcRplusDovetail_10635:HG2_PB_SVrefine2PB10Xhap12_6446:HG2_PB_SVrefine2Falcon2Bionano_4305;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4305:HG2_PB_SVrefine2PB10Xhap12_6446:HG2_PB_SVrefine2PBcRplusDovetail_10635;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0545455;ClusterMaxSizeDiff=0.03003;ClusterMaxEditDist=0.260606;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=168;DistBack=-4479;DistForward=-1;DistMin=-4479;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=567;REFWIDENED=7:156389842-156390408;PctSeqSimilarity=0.973;PctSizeSimilarity=1;PctRecOverlap=0.355;SizeDiff=0;StartDistance=-109;EndDistance=-109;GTMatch=0;TruScore=77;MatchId=5205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:64:1/1:3:19:1:13:./.:0:0:0:0:./.:6:2:./.:.:.:.:.:.
chr7	157280505	HG2_PB_pbsv_8822	A	AAAGCAGCGGACATGCACATCGGAGGCCGGGGAGGGCAGCACCGGGAGAGCCGGGGAGGGACACGGGAGAGCCGGGGAGGGCACACGCGAGAGCCGGGGAGGGCAGCACGCGAGAAGCCGGGGAGGGCACACGCGAGAGCCGGGAAAGGCACGACGGGAGAGCCGGGAAAGGCACACGGAGACGCGGGGGCGGGCACAACGGGAGAGCCGGGGAGGGAACACGGCGGAGAGCGGGGAAGGGCAACACGCGAGAGCCGGGGACAAGCACACGGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5354:HG3_PB_assemblyticsfalcon_25588:HG3_PB_SVrefine2Falcon1Dovetail_5382:HG3_PB_SVrefine2Falcon1Dovetail_5381:HG2_PB_pbsv_8822:HG2_PB_SVrefine2PBcRplusDovetail_10641:HG4_PB_pbsv_8841:HG3_PB_SVrefine2Falcon1Dovetail_5380:HG4_PB_SVrefine2PBcRDovetail_4392;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_8822;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0603774;ClusterMaxSizeDiff=0.0603774;ClusterMaxEditDist=0.236842;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=272;DistBack=-222;DistForward=11;DistMin=-222;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=37;REFWIDENED=7:157280506-157280542;PctSeqSimilarity=0.9502;PctSizeSimilarity=0.9706;PctRecOverlap=0.9414;SizeDiff=8;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=95;MatchId=5209.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:22:./.:2:1:0:0:./.:0:0:0:0:0/0:22:1:./.:.:.:.:.:.
chr7	157350782	HG4_PB_HySA_13022	A	AGGGGGATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCGGCCTTCAAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5355:HG2_PB_pbsv_8826:HG3_PB_pbsv_8603:HG2_PB_HySA_16156:HG2_PB_HySA_16155:HG4_PB_HySA_13022:HG2_PB_assemblyticsfalcon_25775:HG2_PB_SVrefine2Falcon1plusDovetail_11438:HG4_PB_pbsv_8845;NumClusterSVs=9;ExactMatchIDs=HG4_PB_HySA_13022;NumExactMatchSVs=1;ClusterMaxShiftDist=0.185759;ClusterMaxSizeDiff=0.185759;ClusterMaxEditDist=0.23676;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=343;DistBack=4;DistForward=4951;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=7:157350778-157350794;PctSeqSimilarity=0.9855;PctSizeSimilarity=0.9825;PctRecOverlap=0.9767;SizeDiff=6;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=98;MatchId=5210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:./.:10:7:10:12:./.:0:0:0:0:0/1:31:10:0/1:4:19:.:.:.
chr7	157448772	HG2_Ill_MetaSV_4921	G	GCGGGTGCTCACTCTTTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCTGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTTCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_16162:HG4_PB_pbsv_8850:HG3_PB_pbsv_8609:HG2_PB_pbsv_8831:HG2_PB_SVrefine2PB10Xhap12_6454:HG2_PB_PB10Xdip_26852:HG2_Ill_breakscan11_3913:HG4_Ill_MetaSV_5157:HG4_PB_SVrefine2Falcon1Dovetail_5358:HG3_PB_SVrefine2Falcon1Dovetail_5384:HG3_Ill_MetaSV_5097:HG2_Ill_MetaSV_4921:HG2_PB_SVrefine2Falcon2Bionano_4312:HG2_PB_SVrefine2Falcon1plusDovetail_11440;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_4921:HG3_Ill_MetaSV_5097;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0839813;ClusterMaxSizeDiff=0.0777605;ClusterMaxEditDist=0.192073;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=1995;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:157448773-157448787;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:16:28:0|1:20:2:0:26:./.:0:0:0:0:0/1:13:12:./.:3:26:.:.:.
chr7	157569730	HG2_PB_pbsv_8840	A	ACTCCTCCTCCCTTTCCTCCTAACCACTTTCTCCTCTCTTCCTCCTCTTCTTTCCTCCTCCGCCTTCCCTCTCTTCTCCTCCCTCTCCCGCTCCTCCCTCTCCTCTCCTCCGCTTTCTTCCTTAGACCTCCTCCTACTCTCTCCTCCTCCTCTCCTCTCGCCTCTCCTCCTCCTCTTCTCTCCTCCTCCCTCTCCTCCTCCTCCCTCTCCTCCTCTCTCCTTCTTCCTCACTCTCCTCCTGCTCTCCTTCTCCTCCTCCTCACTCCTCCTCCCTCTCTCCTCTCTCCCTCTCCTCCTCTCTCCTCCTTCTCACTCTCCTCTTCCTCTCTCCTTCCTCCTCACTCTCCTCTTCCTCTCTCCTTCTCCTCTCTCTCCTCCTCCTGCCTCCTTCCTCCTCACTCTCCTCACTCCTCTCTCCTCCTCCTCACTCTCCTCTCCCTCCTCCTCTCCTCACTCTCCTCCTCCTCCTCCTCGCTCTCTCCTCCTCCCTCTCCTCTCCTCTCTCCTCCTCCTCCATCTCCCTCTCCCTCTCTTCTTCCTCGCTGCCTCTTACTCTTCCTCCCTCTCCTCTCTCCTCTTCTCCCTCCCTCTCCTCTCTCCCTCTCCTCCTCTCCCTCTGCTCCTCATCTCCTCTCCTCCTTCTCCCTCCCTCGGCATTTCCTCCTCTTTGCTCTCCTCCTATCTCCTTCTCCTCCTTCTCCTCCTCCATCTCCTCCTCCTTCTTCTCCCTTCTCCTCCTGCTTCTCTCGCTAATCCTACCTTCCTTTCCTCTTCCTCTTCCTGCTCCTCTCCTCCTCTCCCTCCTCCTCCCTCTGCCTCCTCCTCCCTCCTCCTCCTCCTTCCCTCTCCTCTCCTCCCTGCTCCTCCTCCTTCCCTCTCCTTTTCCCTCTCCTCCTCAGCCCTCTCCTCCTCCTCCCTCCTCTCCGTCCTCCACCTCCTCCTTCTCCTCCTCCTCCCTCTCGCTCCTTCCTCTTTCCTCCCTCTCCTCCTCCTCCATCTCCTCCTTCCTCCATCTCCTAACTCTTCTTCCTCCCTCTTCTTCTCGCTCCGCCTCTCCTCCTCTCTTCTCTCCTCTCCTGCCTCGCTCTCCTCCTCCTCCCTTCCTCCTACCTCCTCCCTCTTCTCCTCCTCCCTCCTCTCCCTCTTCACCTCCTCCCTGTCCTACTTCTCCTCTCCTTCCTCTCCTCACTTTCCTGCTCTCTCCATCTCCTCCTGCTCTTCCTCCTCCTCTCCTGCCTCGCTCTCTCCTCCTCCTCTCCTCCTCTCACTCCCTCTCCTCCTCCCTCTCCTCATCCTCTCTCCTCCTCTCCTCCTACCTTCCTCTCCTCTTTTCCTCCCTCTCCTCCTCGCCTTTCCATCCTCCACTTCCTCTCCATCTCCTCTCTCTTCCTCCTCCCTCTTCCTCCTCTCCCTCTCCTCCTCCTCCCTCATCCTCCTCCATCTCTCCTCCTCTCTCCCCCCTCCTCCTCGCTCTTACTCCCGTCCTTGGCCTCTCCTCTTCGCTCTTCCGCTCTCCTCCTCCATCTTCTCCTTCTCCTCCTCCCTCCCTCCTCTTCCCTCTCCTCCTCGTTCCTCTCCTCCTCTCCCT	10	PASS	ClusterIDs=HG2_PB_pbsv_8839:HG2_PB_pbsv_8840:HG4_PB_pbsv_8858:HG4_PB_SVrefine2Falcon1Dovetail_5367:HG2_PB_SVrefine2Falcon1plusDovetail_11445:HG2_PB_SVrefine2PB10Xhap12_6462:HG2_PB_SVrefine2Falcon2Bionano_4316:HG2_PB_SVrefine2PBcRplusDovetail_10649:HG3_PB_SVrefine2Falcon1Dovetail_5392;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_8840;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0462428;ClusterMaxSizeDiff=0.0462428;ClusterMaxEditDist=0.203597;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1587;DistBack=-7618;DistForward=1683;DistMin=-7618;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=381;REFWIDENED=7:157569351-157569731;PctSeqSimilarity=0.9445;PctSizeSimilarity=0.9824;PctRecOverlap=0.7511;SizeDiff=28;StartDistance=381;EndDistance=381;GTMatch=0;TruScore=89;MatchId=5212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:38:1/1:2:9:0:13:./.:0:0:0:0:0/0:21:0:0/1:29:116:.:3649:.
chr7	157836057	HG4_Ill_GATKHC_14532	A	ACATGACCAGGGACAGGAGGATCAGGGATCAGGGATGAACATCAGAGGGACTCT	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_25806:HG4_PB_HySA_13066:HG2_PB_pbsv_8867:HG2_PB_HySA_16197:HG4_Ill_svaba_11345:HG4_Ill_Krunchall_12747:HG4_Ill_GATKHC_14532:HG4_Ill_250bpfermikitraw_12072:HG2_Ill_svaba_11224:HG2_Ill_SVrefine2DISCOVARplusDovetail_12535:HG2_Ill_Krunchall_12453:HG2_Ill_GATKHC_14491:HG2_Ill_250bpfermikitraw_12118;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12118:HG2_Ill_GATKHC_14491:HG2_Ill_Krunchall_12453:HG2_Ill_SVrefine2DISCOVARplusDovetail_12535:HG2_Ill_svaba_11224:HG4_Ill_250bpfermikitraw_12072:HG4_Ill_GATKHC_14532:HG4_Ill_Krunchall_12747:HG4_Ill_svaba_11345;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0925926;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.203704;PBcalls=4;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=10164;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=109;REFWIDENED=7:157836058-157836166;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5213.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:19:0|1:23:4:4:14:./.:0:0:0:0:0/1:27:19:./.:.:.:.:1466:.
chr7	157884617	HG2_PB_HySA_16207	T	TGGGTGGGTGGAGGGAAAGGTGATAGATGGATGGGTAGCGAGATGGGGGGGTGGGGGATAGGTGATAGATGGATGAGTAGAGAGATGGTTGGGTG	20	PASS	ClusterIDs=HG3_PB_HySA_13501:HG4_PB_pbsv_8897:HG2_PB_HySA_16207:HG3_PB_pbsv_8656:HG4_PB_HySA_13071:HG2_PB_assemblyticsfalcon_25814:HG2_PB_PB10Xdip_26920:HG2_Ill_breakscan11_3918:HG2_PB_SVrefine2Falcon1plusDovetail_11462:HG2_Ill_GATKHC_14495;NumClusterSVs=10;ExactMatchIDs=HG2_PB_HySA_16207;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0967742;ClusterMaxSizeDiff=0.0860215;ClusterMaxEditDist=0.196891;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=94;DistBack=29;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=567;REFWIDENED=7:157884263-157884829;PctSeqSimilarity=0.9911;PctSizeSimilarity=0.9787;PctRecOverlap=0.8;SizeDiff=2;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=92;MatchId=5215.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:5:24:1/1:1:9:3:10:./.:0:0:0:0:./.:0:2:./.:.:.:.:.:.
chr7	157918784	HG3_PB_pbsv_8659	C	CCACCTACCCCCAGGAACAGCGGCGGCGGAACTTCCTCTCCGCCAAGCCAGCCCCAGGAAGCGGGCCGCGGAACTTCCTCTCCGCAGCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5384:HG2_PB_HySA_16209:HG3_PB_HySA_13503:HG4_PB_HySA_13072:HG3_PB_pbsv_8659:HG2_PB_pbsv_8877:HG2_PB_SVrefine2Falcon2Bionano_4331;NumClusterSVs=7;ExactMatchIDs=HG3_PB_pbsv_8659;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0888889;ClusterMaxSizeDiff=0.0888889;ClusterMaxEditDist=0.295082;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=88;DistBack=-560;DistForward=159;DistMin=-560;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=735;REFWIDENED=7:157918678-157919412;PctSeqSimilarity=0.9573;PctSizeSimilarity=1;PctRecOverlap=0.1573;SizeDiff=0;StartDistance=75;EndDistance=75;GTMatch=1;TruScore=70;MatchId=5216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:./.:13:12:15:7:./.:0:0:0:0:0/0:20:0:./.:.:.:.:.:.
chr7	158066128	HG2_PB_SVrefine2PB10Xhap12_6497	A	ACAGACGCGGGAGGAGCCGCAGACGCAGGGGGAGCCGCAGGCACAGGGGGAGCCGCAGGCACAGGGGGAGCCGCAGGCACAGGGGGAGCCGCAGACAGACATGGGAGGAGCCGCAGACACGGGGAGCCGCAGACACAGGGGGAGCCGCAGGCACAGGGGGAGCCGCAGACAGACATGGGAGGAGCCGCAGACACGGGGAGCCGCAGGCATGGGGGAGCCGCAGACAGACATGGGAGGAGCCGCAGACACGGGAGGAGCCGCAGACACAGGGAGCCGCAGACACAGGGGGAGCTGCAGACACAGGAGGAGACACACAAGGAGCCGCAGACACAGGGGGAGCCACAGACAGACATGGGAGGAGCCGCAGACACGGGGAGCCGCAGACACAGGGGGAGCCGCAGGCATGGGGGAGCCGCAGACACAGGGGGAGCCGCAGACACAGGAGGAGACACACGAGGAGCCG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5419:HG4_PB_SVrefine2Falcon1Dovetail_5394:HG3_PB_SVrefine2Falcon1Dovetail_5420:HG3_PB_pbsv_8674:HG2_PB_pbsv_8892:HG2_PB_PB10Xdip_26949:HG2_PB_pbsv_8891:HG2_PB_SVrefine2PBcRplusDovetail_10676:HG2_PB_SVrefine2PB10Xhap12_6497:HG2_PB_SVrefine2Falcon2Bionano_4339:HG2_PB_SVrefine2Falcon1plusDovetail_11476:HG3_PB_SVrefine2PBcRDovetail_4011;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4339:HG2_PB_SVrefine2PB10Xhap12_6497:HG2_PB_SVrefine2PBcRplusDovetail_10676;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0824972;ClusterMaxSizeDiff=0.0785634;ClusterMaxEditDist=0.349493;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=462;DistBack=-898;DistForward=62;DistMin=-898;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=822;REFWIDENED=7:158066129-158066950;PctSeqSimilarity=0.9515;PctSizeSimilarity=0.9329;PctRecOverlap=0.1296;SizeDiff=31;StartDistance=-387;EndDistance=-387;GTMatch=0;TruScore=67;MatchId=5218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:1:25:0:12:./.:0:0:0:0:0/1:6:3:./.:2:9:.:.:.
chr7	158107517	HG2_PB_SVrefine2PB10Xhap12_6500	G	GGGACCCCCTGAAGGACAGAGGTGAACCCGGAACCCCTGTAGGACAGAGGTGAACCCGGGACCCCCTTAAGGACAGAGGTGAACCCGGGACGCCCTCAAGGACAGAGGTGAACCCGGGACCCCCTAAAGGACAGAGGTGAACCCGGGACCCCCTGAAGGACAGAGGTGAACCCGGGACCCCCTGAAGGACAGAGGTGAACCCGGGACGCCCTCAAGGACAGAGGTGAACCCGGGACCCCCTAAAGGACAGAGGTGAACCCGGGACCCCCTGAAGGACAGAGGTGAACCCGGGACCCCTGAAGGACAGAGGTGAACCCGGGACGCCCTCAAGGACAGAGGTGAACCCGGGACCCCCTGAAGGACAGAGGTGAACCCAGGACGCCCTCAAGGACAGAGGTGAACCCAGGACCCCCTGAAGGACAGAGGTGAACCCGGGACCCCTGAAGGACAGAGGTGAACCCGGGACACCCTCAAGGACAGAGGTGAACCCGGGACCCCCTGAAGGACAGAGGTGAACCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4342:HG3_PB_pbsv_8678:HG4_PB_pbsv_8923:HG4_PB_pbsv_8922:HG4_PB_SVrefine2PBcRDovetail_4413:HG3_PB_pbsv_8677:HG2_PB_SVrefine2Falcon1plusDovetail_11479:HG4_PB_SVrefine2Falcon1Dovetail_5397:HG2_PB_SVrefine2PBcRplusDovetail_10679:HG2_PB_SVrefine2PB10Xhap12_6500;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6500:HG2_PB_SVrefine2PBcRplusDovetail_10679;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0419048;ClusterMaxSizeDiff=0.0380952;ClusterMaxEditDist=0.244508;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=519;DistBack=2343;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=559;REFWIDENED=7:158107517-158108075;PctSeqSimilarity=0.9898;PctSizeSimilarity=0.9943;PctRecOverlap=0.5908;SizeDiff=-3;StartDistance=-212;EndDistance=-212;GTMatch=0;TruScore=85;MatchId=5219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:58:1/1:1:24:4:28:./.:0:0:0:0:./.:0:1:0/1:2:12:.:.:.
chr7	158178562	HG2_PB_SVrefine2Falcon2Bionano_4349	C	CCCCTCCTCCCATGCCCCGAGTCCCTCCTTCCGTGCTCCTCCTCCCTCCTCCCATTCCCCGAGTCCCTCCTCCTGTGCTCTGAGTCCCTATTTCTGTGCCCCTCCTCCCTCCTCCCATGCCCTGAGTCCCTCCTCCCGTGCCCCAAGTCCCTCCTCCCGTGCCCCGAGTCCCTCCTCCCGTGCCGAGTCCCTCCTTCTGTACCCCTCCTCCCTCCTCCCGTGCCCCAAGTCCCTCCTCCCATGCCCAGAGTCCCTCCTCCCATGCCCCAAGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4349:HG2_PB_pbsv_8903:HG2_PB_PB10Xdip_27018:HG4_PB_pbsv_8934:HG3_PB_pbsv_8687:HG2_PB_SVrefine2Falcon1plusDovetail_11487:HG4_PB_SVrefine2Falcon1Dovetail_5403:HG4_PB_SVrefine2PBcRDovetail_4414:HG3_PB_SVrefine2Falcon1Dovetail_5424:HG3_PB_SVrefine2PBcRDovetail_4018:HG2_PB_SVrefine2PBcRplusDovetail_10686:HG2_PB_SVrefine2PB10Xhap12_6510;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4349:HG3_PB_SVrefine2PBcRDovetail_4018:HG2_PB_SVrefine2PBcRplusDovetail_10686:HG2_PB_SVrefine2PB10Xhap12_6510;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0441176;ClusterMaxSizeDiff=0.0367647;ClusterMaxEditDist=0.216998;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=271;DistBack=-9415;DistForward=570;DistMin=-9415;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=572;REFWIDENED=7:158178563-158179134;PctSeqSimilarity=0.9874;PctSizeSimilarity=0.9963;PctRecOverlap=0.2472;SizeDiff=1;StartDistance=-204;EndDistance=-204;GTMatch=0;TruScore=74;MatchId=5221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:27:1/1:1:11:0:6:./.:0:0:0:0:./.:1:1:./.:.:.:.:8970:.
chr7	158203560	HG2_Ill_GATKHCSBGrefine_6096	G	GCCCAGGTGACCCCAGACACGGAGACACAGGGAAGGGGTGACGGGACAGTGTGCTCATGGGATGGGAGGCCCCAGAGGGACAGTGCAGACAAGTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6357:HG4_Ill_Krunchall_12762:HG3_PB_pbsv_8693:HG4_Ill_GATKHC_14577:HG4_PB_pbsv_8939:HG4_Ill_GATKHCSBGrefine_6192:HG2_PB_pbsv_8909:HG3_Ill_GATKHC_14501:HG3_Ill_GATKHCSBGrefine_6018:HG3_Ill_250bpfermikitraw_11798:HG3_Ill_150bpfermikitraw_11484:HG2_Ill_GATKHC_14528:HG2_Ill_GATKHCSBGrefine_6096:HG2_Ill_250bpfermikitraw_12137:HG2_Ill_150bpfermikitraw_11406:HG2_PB_PB10Xdip_27030:HG4_PB_SVrefine2Falcon1Dovetail_5409:HG3_PB_SVrefine2PBcRDovetail_4021:HG3_PB_SVrefine2Falcon1Dovetail_5428:HG3_Ill_SVrefine2DISCOVARDovetail_6624:HG2_PB_SVrefine2PBcRplusDovetail_10689:HG2_PB_SVrefine2PB10Xhap12_6515:HG2_PB_SVrefine2Falcon2Bionano_4353:HG2_PB_SVrefine2Falcon1plusDovetail_11490:HG2_Ill_SVrefine2DISCOVARplusDovetail_12550;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11406:HG2_Ill_250bpfermikitraw_12137:HG2_Ill_GATKHCSBGrefine_6096:HG2_Ill_GATKHC_14528:HG3_Ill_150bpfermikitraw_11484:HG3_Ill_250bpfermikitraw_11798:HG3_Ill_GATKHCSBGrefine_6018:HG3_Ill_GATKHC_14501:HG4_Ill_GATKHCSBGrefine_6192:HG4_Ill_GATKHC_14577:HG4_Ill_Krunchall_12762;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0967742;ClusterMaxSizeDiff=0.0860215;ClusterMaxEditDist=0.273224;PBcalls=11;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=94;DistBack=-117;DistForward=4153;DistMin=-117;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=192;REFWIDENED=7:158203486-158203677;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:10:40:1/1:6:19:3:17:./.:0:0:0:0:0/1:5:32:./.:.:.:.:8970:.
chr7	158254655	HG4_Ill_SVrefine2DISCOVARDovetail_6416	T	TTGCTGCAGGAGCCGGCGCTTGGGTGAACGCCTCCCGTCCTTGCATAGAACCGCCTGGGTGCTTCGGTTCGTACTTCTCCTTCCATGCTTTCAGACCCTCTGTGCTTCCTCCCGCGTGACCCGCCCACGCCCTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6521:HG4_PB_SVrefine2Falcon1Dovetail_5419:HG3_PB_SVrefine2PBcRDovetail_4023:HG4_Ill_250bpfermikitraw_12096:HG2_PB_PB10Xdip_27049:HG4_PB_SVrefine2Falcon1Dovetail_5418:HG4_PB_pbsv_8949:HG2_PB_SVrefine2PBcRplusDovetail_10692:HG3_PB_pbsv_8703:HG4_PB_SVrefine2PBcRDovetail_4420:HG4_Ill_SVrefine2DISCOVARDovetail_6416:HG3_PB_SVrefine2Falcon1Dovetail_5435;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6521:HG4_PB_SVrefine2PBcRDovetail_4420:HG4_Ill_SVrefine2DISCOVARDovetail_6416:HG3_PB_SVrefine2Falcon1Dovetail_5435;NumExactMatchSVs=4;ClusterMaxShiftDist=0.100719;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.254296;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=133;DistBack=1552;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=112;REFWIDENED=7:158254656-158254767;PctSeqSimilarity=0.9655;PctSizeSimilarity=0.911;PctRecOverlap=0.2313;SizeDiff=-13;StartDistance=-106;EndDistance=-106;GTMatch=0;TruScore=70;MatchId=5227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:29:0|1:27:6:2:27:./.:0:0:0:0:0/1:14:15:./.:.:.:.:.:.
chr7	158261641	HG3_Ill_GATKHCSBGrefine_6022	C	CCACACACACTCCCAGTGGATCAACACTATGCACACCCACGCACACTCCGGGTGGATCAACAGTATGCACACCCACACACACTCCAGGTGGATCAACAGTATGCACACCCACGCACATTCCGGGTGGATAAACAGTATGCACACCCACGCACACTCCAGGTGGATCAACAGTATGCACACTCACACACACTCCGGGTGGATCAACAGAATGCACACCCACGCACATTCCTGGTGGATCAACAGTATGCACACCTATGCACATTCCAGGTGGATCAACAGTATGCACACCCATGCACACTCCAGGTGGATCAACACTATGCACACCCATGCACACTCCAGGTGGATCAACACTATGCACA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6359:HG4_Ill_SVrefine2DISCOVARDovetail_6417:HG4_PB_pbsv_8951:HG4_Ill_GATKHCSBGrefine_6195:HG3_PB_pbsv_8705:HG4_Ill_250bpfermikitraw_12098:HG3_Ill_GATKHCSBGrefine_6022:HG2_Ill_GATKHC_14536:HG2_Ill_GATKHCSBGrefine_6097:HG2_PB_pbsv_8919:HG4_PB_SVrefine2Falcon1Dovetail_5420:HG3_PB_SVrefine2Falcon1Dovetail_5437:HG2_PB_SVrefine2Falcon1plusDovetail_11495:HG3_PB_SVrefine2Falcon1Dovetail_5436:HG4_PB_SVrefine2PBcRDovetail_4422:HG2_PB_SVrefine2PBcRplusDovetail_10693;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6097:HG2_Ill_GATKHC_14536:HG3_Ill_GATKHCSBGrefine_6022:HG4_Ill_250bpfermikitraw_12098:HG4_Ill_GATKHCSBGrefine_6195;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0991736;ClusterMaxSizeDiff=0.0936639;ClusterMaxEditDist=0.272727;PBcalls=9;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=358;DistBack=3;DistForward=9;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=349;REFWIDENED=7:158261464-158261812;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:0|1:26:2:2:37:./.:0:0:0:0:0/1:18:8:./.:5:51:.:.:.
chr7	158327053	HG2_Ill_GATKHCSBGrefine_6098	C	CGCCCTGGGCTCCGTCAGGGATGGCTGTGGGTGCAGGTTGTGACCACCCAT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_6098:HG3_PB_pbsv_8714:HG3_PB_assemblyticsfalcon_25694:HG2_PB_HySA_16237:HG3_Ill_GATKHCSBGrefine_6024:HG2_Ill_GATKHC_14539;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6098:HG3_Ill_GATKHCSBGrefine_6024:HG2_Ill_GATKHC_14539;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.228571;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=220;DistForward=87;DistMin=87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=474;REFWIDENED=7:158326683-158327156;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:16:0|1:21:2:0:19:./.:0:0:0:0:0/1:11:2:./.:.:.:.:3666:.
chr7	158448369	HG2_PB_SVrefine2PB10Xhap12_6533	T	TTGCCCTGCACGCAGCACCACCCGTCCCCTCCCTGCCTCATGACCAGGCCCCGTCCTCCCCATCTGCCCTGCACGCAGCACCACCCGTCCCCTCCCTGCCTCATGACCAGGCCCCGTCCTCCCCATG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_27085:HG3_PB_pbsv_8720:HG2_PB_pbsv_8927:HG2_Ill_manta_2558:HG4_PB_SVrefine2Falcon1Dovetail_5424:HG3_PB_HySA_13527:HG2_PB_HySA_16245:HG3_PB_SVrefine2PBcRDovetail_4025:HG3_Ill_SVrefine2DISCOVARDovetail_6630:HG2_PB_SVrefine2PBcRplusDovetail_10700:HG2_PB_SVrefine2PB10Xhap12_6533:HG2_PB_SVrefine2Falcon2Bionano_4360:HG2_PB_SVrefine2Falcon1plusDovetail_11501:HG2_Ill_SVrefine2DISCOVARplusDovetail_12556:HG4_Ill_GATKHCSBGrefine_6197:HG3_PB_SVrefine2Falcon1Dovetail_5445:HG3_Ill_GATKHCSBGrefine_6027:HG2_Ill_GATKHCSBGrefine_6100;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12556:HG2_PB_SVrefine2Falcon1plusDovetail_11501:HG2_PB_SVrefine2Falcon2Bionano_4360:HG2_PB_SVrefine2PB10Xhap12_6533:HG2_PB_SVrefine2PBcRplusDovetail_10700:HG3_Ill_SVrefine2DISCOVARDovetail_6630:HG3_PB_SVrefine2PBcRDovetail_4025;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0705882;ClusterMaxSizeDiff=0.0700389;ClusterMaxEditDist=0.19697;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=126;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=67;REFWIDENED=7:158448370-158448436;PctSeqSimilarity=0.9961;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:./.:0:5:0:1:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr7	158603691	HG2_PB_pbsv_8938	A	AAAAAACAAAAGGGGTGCGGAACCCGGAGCGGAGCTTGCAGTGAGCCGAATTCCCGTCCACTGCACTCCAGCCTGGGCGACAGATGCGGAGACTGTGCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11507:HG2_PB_pbsv_8938:HG2_Ill_breakscan11_3924;NumClusterSVs=3;ExactMatchIDs=HG2_PB_pbsv_8938;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0300752;ClusterMaxSizeDiff=0.0300752;ClusterMaxEditDist=0.104089;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=134;DistBack=2;DistForward=12;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=7:158603692-158603706;PctSeqSimilarity=0.9526;PctSizeSimilarity=0.9851;PctRecOverlap=0.9704;SizeDiff=2;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=96;MatchId=5231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:27:0|1:32:1:1:24:./.:0:0:0:0:0/1:13:5:./.:.:.:.:.:.
chr7	158750702	HG3_PB_SVrefine2PBcRDovetail_4033	T	TCTGCCCGTCAGCCACAGCCACACCCTAGGTCGTGGAGAGGGTGTGGTCTGCAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_27113:HG4_PB_HySA_13125:HG2_PB_HySA_16274:HG2_PB_pbsv_8945:HG4_PB_SVrefine2PBcRDovetail_4437:HG4_PB_pbsv_8976:HG4_Ill_SVrefine2DISCOVARDovetail_6431:HG4_Ill_GATKHC_14611:HG4_Ill_GATKHCSBGrefine_6209:HG4_Ill_250bpfermikitraw_12114:HG4_Ill_150bpfermikitraw_11625:HG3_PB_SVrefine2PBcRDovetail_4033:HG3_PB_SVrefine2Falcon1Dovetail_5456:HG3_Ill_SVrefine2DISCOVARDovetail_6640:HG3_Ill_GATKHC_14531:HG3_Ill_GATKHCSBGrefine_6035:HG3_Ill_250bpfermikitraw_11820:HG3_Ill_150bpfermikitraw_11500:HG2_PB_SVrefine2PBcRplusDovetail_10708:HG2_PB_SVrefine2PB10Xhap12_6546:HG2_PB_SVrefine2Falcon2Bionano_4367:HG2_PB_SVrefine2Falcon1plusDovetail_11512:HG2_Ill_SVrefine2DISCOVARplusDovetail_12566:HG2_Ill_Krunchall_12487:HG2_Ill_GATKHCSBGrefine_6108:HG2_Ill_250bpfermikitraw_12160:HG2_Ill_150bpfermikitraw_11426:HG2_10X_SVrefine210Xhap12_6378;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6378:HG2_Ill_150bpfermikitraw_11426:HG2_Ill_250bpfermikitraw_12160:HG2_Ill_GATKHCSBGrefine_6108:HG2_Ill_Krunchall_12487:HG2_Ill_SVrefine2DISCOVARplusDovetail_12566:HG2_PB_SVrefine2Falcon1plusDovetail_11512:HG2_PB_SVrefine2Falcon2Bionano_4367:HG2_PB_SVrefine2PB10Xhap12_6546:HG2_PB_SVrefine2PBcRplusDovetail_10708:HG3_Ill_150bpfermikitraw_11500:HG3_Ill_250bpfermikitraw_11820:HG3_Ill_GATKHCSBGrefine_6035:HG3_Ill_GATKHC_14531:HG3_Ill_SVrefine2DISCOVARDovetail_6640:HG3_PB_SVrefine2Falcon1Dovetail_5456:HG3_PB_SVrefine2PBcRDovetail_4033:HG4_Ill_150bpfermikitraw_11625:HG4_Ill_250bpfermikitraw_12114:HG4_Ill_GATKHCSBGrefine_6209:HG4_Ill_GATKHC_14611:HG4_Ill_SVrefine2DISCOVARDovetail_6431:HG4_PB_SVrefine2PBcRDovetail_4437;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0900901;ClusterMaxSizeDiff=0.0900901;ClusterMaxEditDist=0.224138;PBcalls=12;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=53;DistBack=-1;DistForward=52;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=176;REFWIDENED=7:158750703-158750878;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5232.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:58:./.:0:0:0:0:./.:0:0:0:0:0/1:4:21:./.:.:.:.:.:.
chr7	158766570	HG2_PB_SVrefine2PBcRplusDovetail_10709	T	TCCCTCGCCCAGGCCCCCCACCCGCCTCTCCGCGCCCCCCACCCTCGCCCAGGCCCCCCACCCGCCTCTCCGCGCCCCCCACCCTCGCCCAGGCCCCCCACCCGCCTCTCCGCGCCCCCCACCCTCGCCCAGGCCCCCCCCCGCCTCTCCGCGCCCCCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_10709:HG3_PB_assemblyticsfalcon_25725:HG3_PB_HySA_13551:HG3_PB_SVrefine2Falcon1Dovetail_5457:HG4_PB_SVrefine2Falcon1Dovetail_5434:HG2_PB_SVrefine2Falcon1plusDovetail_11513:HG2_PB_pbsv_8946:HG4_PB_pbsv_8977:HG2_PB_SVrefine2PB10Xhap12_6547:HG3_PB_pbsv_8733:HG4_PB_SVrefine2PBcRDovetail_4438;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_10709:HG4_PB_SVrefine2PBcRDovetail_4438;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.267913;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=159;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=203;REFWIDENED=7:158766571-158766773;PctSeqSimilarity=0.9727;PctSizeSimilarity=0.9815;PctRecOverlap=0.2945;SizeDiff=-3;StartDistance=-113;EndDistance=-113;GTMatch=0;TruScore=74;MatchId=5233.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:./.:0:0:0:0:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr7	158790609	HG4_PB_SVrefine2PBcRDovetail_4439	T	TGTGGGGGGCCCCCTCCACACCCCCGACCTGCGTCCACGCTCCCCTCTCCTCAGAGGGACCCCCCTCCACACTCCCCACCTTCATCCACGCTCCCCTCTCCTCAGAGGGACCCCCCTCCACACTCCCCACCTTCATCCACGCTCCCCTCTCCTCAGTGGGGACCCCCCTCCACACTCCCCACCTTCATCCATGCTCCCCTCTCCTCAGTGGGGACCCCCTCCACACCCCCCACGTGCGTCCACGCTCCCCTCTCCTCAGTGGGGACCCCCCTCCACACTCCCCACCTTCATCCACGCTCCCCTCTCCTCAGAGGGACCTCCCTCCACACTCCCCACCTTCATCCACGCTCCCCTCTCCTCAGAGGGACCCCCCTCCACACTCCCCACCTTCATCCACGCTCCCCTCTCCTCAGTGGGGACCCCCCTCCACACCCCCACGTGCGTCCACGCTCCCCTCTCCTCAGTGTGGACCCCCCTCCACACCCCCCACGTGCGTCCACGCTCCCCTCTCCTCAGAGGGGACCCCCCTCCACACTCCCCACCTTCATCCACGCTCCCCTCTCCTCAGTGGGGACCCCCCTCCACACCCCCACCTTCATCCACGCTCCCCTCTCCTCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11514:HG4_PB_SVrefine2Falcon1Dovetail_5435:HG4_PB_SVrefine2PBcRDovetail_4439:HG2_PB_SVrefine2Falcon2Bionano_4369;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_4439;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0312243;ClusterMaxSizeDiff=0.0312243;ClusterMaxEditDist=0.0780731;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=617;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1027;REFWIDENED=7:158790610-158791636;PctSeqSimilarity=0.9746;PctSizeSimilarity=0.9952;PctRecOverlap=0.5362;SizeDiff=-3;StartDistance=-286;EndDistance=-286;GTMatch=1;TruScore=83;MatchId=5234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:./.:0:0:0:0:./.:0:0:0:0:1/1:0:11:1/1:1:28:.:.:.
chr7	158810694	HG2_PB_SVrefine2PBcRplusDovetail_10712	G	GTGTGTCTCAGCCTTAGCTCCCCCACTGTGTCTGTCCCAACTCCCCATTTTATCTCAGTCTCACCCCACATTGTGTCTCAGTCTCACCCCCCGTTGTGTCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCTGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCTGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCTGTCTCACCCCCCCATTGTGTCTCTGTCTCACCCCCCATTGTGTCTCTGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTATCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCTGTCTCACCCCCCCATTGTATCTCAGTCTCACCCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTGTCTCAGTCTCACCCCCCATTGTATCTCAGTCTCACCCCCCAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11516:HG4_PB_HySA_13137:HG4_PB_pbsv_8979:HG3_PB_pbsv_8739:HG2_PB_HySA_16287:HG4_PB_HySA_13136:HG3_PB_HySA_13561:HG2_PB_SVrefine2Falcon2Bionano_4371:HG2_PB_pbsv_8951:HG3_PB_pbsv_8738:HG4_PB_SVrefine2PBcRDovetail_4441:HG2_PB_SVrefine2PBcRplusDovetail_10712:HG3_PB_SVrefine2Falcon1Dovetail_5461:HG3_PB_SVrefine2PBcRDovetail_4037:HG4_PB_SVrefine2Falcon1Dovetail_5438;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_10712:HG4_PB_SVrefine2PBcRDovetail_4441;NumExactMatchSVs=2;ClusterMaxShiftDist=0.211538;ClusterMaxSizeDiff=0.208333;ClusterMaxEditDist=0.324366;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=648;DistBack=11286;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=131;REFWIDENED=7:158810695-158810825;PctSeqSimilarity=0.98;PctSizeSimilarity=0.9878;PctRecOverlap=0.6545;SizeDiff=-8;StartDistance=-223;EndDistance=-223;GTMatch=0;TruScore=87;MatchId=5235.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:./.:0:0:0:0:./.:0:0:0:0:./.:0:5:./.:3:30:.:610:.
chr7	158834369	HG3_Ill_150bpfermikitraw_11504	C	CGGGTCCTGAGGGTCTGTCATGGGTCACTGCTTTCTACATCACAGGTCCGTTGAGGATCCATCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3925:HG2_PB_HySA_16288:HG2_PB_pbsv_8953:HG3_Ill_GATKHCSBGrefine_6036:HG3_Ill_250bpfermikitraw_11823:HG3_Ill_150bpfermikitraw_11504:HG2_PB_assemblyticsPBcR_25078:HG2_Ill_Krunchall_12490:HG2_Ill_GATKHCSBGrefine_6109:HG2_Ill_250bpfermikitraw_12165:HG2_Ill_150bpfermikitraw_11430;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11430:HG2_Ill_250bpfermikitraw_12165:HG2_Ill_GATKHCSBGrefine_6109:HG2_Ill_Krunchall_12490:HG2_PB_assemblyticsPBcR_25078:HG3_Ill_150bpfermikitraw_11504:HG3_Ill_250bpfermikitraw_11823:HG3_Ill_GATKHCSBGrefine_6036;NumExactMatchSVs=8;ClusterMaxShiftDist=0.134328;ClusterMaxSizeDiff=0.119403;ClusterMaxEditDist=0.208955;PBcalls=3;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=63;DistBack=37;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=7:158834370-158834424;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5236.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:3:38:0:20:./.:0:0:0:0:0/1:10:13:./.:.:.:.:.:.
chr7	158881496	HG3_PB_SVrefine2Falcon1Dovetail_5466	T	TGCCTCAGGCCTCGGTTCCTCATCTGGGGAATGGGAATAGCCTCAGGCCTCAGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATAGCCTCAGGCCTCGGCTCCTCATCTGTGGAATGGGAATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4373:HG3_PB_SVrefine2Falcon1Dovetail_5466:HG2_PB_pbsv_8958;NumClusterSVs=3;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5466;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0590062;ClusterMaxSizeDiff=0.052795;ClusterMaxEditDist=0.212733;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=645;DistBack=-11874;DistForward=-1;DistMin=-11874;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=685;REFWIDENED=7:158881497-158882181;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=0.9023;SizeDiff=0;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=96;MatchId=5237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:38:1|0:3:26:18:0:./.:0:2:0:1:./.:0:5:0/1:4:6:.:760:.
chr8	580078	HG2_PB_assemblyticsPBcR_25097	G	GCACCCACACAGACAGAGCTGACTCACACCCTCCCGTGACCACCCAGAGCTGACTCACACCCTCCTGTGAC	10	PASS	ClusterIDs=HG3_PB_HySA_13580:HG2_PB_PB10Xdip_30167:HG3_PB_pbsv_8771:HG2_PB_HySA_16311:HG4_PB_pbsv_9007:HG2_PB_assemblyticsfalcon_25898:HG2_PB_pbsv_8988:HG2_PB_assemblyticsPBcR_25097;NumClusterSVs=8;ExactMatchIDs=HG2_PB_assemblyticsPBcR_25097:HG2_PB_assemblyticsfalcon_25898;NumExactMatchSVs=2;ClusterMaxShiftDist=0.134228;ClusterMaxSizeDiff=0.120805;ClusterMaxEditDist=0.246753;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=70;DistBack=0;DistForward=37;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=38;REFWIDENED=8:580077-580117;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5238.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:38:./.:0:0:0:1:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr8	589587	HG2_Ill_250bpfermikitraw_12188	C	CGACCAAGCACCCTGGATTCAGAGGCAGCCACCAATCCAGTTAGCAGACAA	20	PASS	ClusterIDs=HG2_PB_pbsv_8989:HG2_PB_PB10Xdip_30169:HG4_PB_pbsv_9009:HG4_Ill_GATKHC_14651:HG4_Ill_GATKHCSBGrefine_6227:HG4_Ill_150bpfermikitraw_11644:HG3_PB_assemblyticsfalcon_25759:HG3_Ill_GATKHC_14561:HG3_Ill_250bpfermikitraw_11835:HG2_PB_assemblyticsfalcon_25899:HG2_PB_assemblyticsPBcR_25099:HG2_Ill_GATKHC_14592:HG2_Ill_GATKHCSBGrefine_6121:HG2_Ill_250bpfermikitraw_12188:HG2_Ill_150bpfermikitraw_11453;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11453:HG2_Ill_250bpfermikitraw_12188:HG2_Ill_GATKHCSBGrefine_6121:HG2_Ill_GATKHC_14592:HG2_PB_assemblyticsPBcR_25099:HG2_PB_assemblyticsfalcon_25899:HG3_Ill_250bpfermikitraw_11835:HG3_Ill_GATKHC_14561:HG3_PB_assemblyticsfalcon_25759:HG4_Ill_150bpfermikitraw_11644:HG4_Ill_GATKHCSBGrefine_6227:HG4_Ill_GATKHC_14651;NumExactMatchSVs=12;ClusterMaxShiftDist=0.114286;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.275229;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=5403;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=226;REFWIDENED=8:589512-589737;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5239.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:./.:0:0:0:0:./.:0:0:0:0:0/1:8:6:./.:.:.:.:.:.
chr8	697686	HG2_PB_SVrefine2Falcon2Bionano_4382	T	TGGTGGGATGGGCGGGTCTGTGGTGGAATGAACGTGTCTGCGGTGGGATGGGGGGGCTCTGCGGTGGGATGGGCGGGCCTGCGGTGGGATGGGGGTCTCTGCGGTGGGATGGGGGTCTCTGCGGTGGGATGGGGGGCTCTGCGGTGGGATGGGGGGCTCTGTGGTGGGATGGGCGGGCCTGCGGTGGGATGGGCGGGCCTGCGGTGGGATGGGGGGCTCTGCGGTGGGATGGGCGGGTCTGCGGTGGGATGGGCGGGCCTGCGGTGGGATGGGGGGCTCTGCGGTGGGATGGGCGGGCCTGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_10723:HG2_PB_SVrefine2Falcon1plusDovetail_11534:HG2_PB_SVrefine2PB10Xhap12_6571:HG2_PB_pbsv_8990:HG2_PB_SVrefine2Falcon2Bionano_4382:HG3_PB_SVrefine2Falcon1Dovetail_5491:HG4_PB_SVrefine2Falcon1Dovetail_5467;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4382;NumExactMatchSVs=1;ClusterMaxShiftDist=0.130782;ClusterMaxSizeDiff=0.130782;ClusterMaxEditDist=0.247987;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=301;DistBack=3086;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=332;REFWIDENED=8:697687-698018;PctSeqSimilarity=0.9888;PctSizeSimilarity=0.9967;PctRecOverlap=0.814;SizeDiff=1;StartDistance=-56;EndDistance=-56;GTMatch=1;TruScore=93;MatchId=5240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:0:14:0:15:./.:0:0:0:0:./.:0:0:0/1:1:9:.:.:.
chr8	844845	HG2_PB_PB10Xdip_30268	G	CTGGCAGGGGCGGGGTGGGGAGAGCGGAGTGGTGACTGGCAGGGGTAGCGGCTGGCAGGGGCGGGGTGGGGGGAGTGGAGTGGCGGCTGGCAGGGGCGGGGTGGGGAAAGTGGAGCGGTGGATGGCAGGGGTGGCATGGGAAGAGCAGAGTGGTGGCTGGCAGGGCGGGGTGGGGAGAGCGGAGTGGTGACTGGCAGGGGTAGCGGCTGGCAGGGGCGGGGTGGGGACAGCAGAGTGGTGGCTGGCAGGGGCGGGGTGGGGAGAGCGGAGTGGTGGCTGGCAGGGGCGGGGTGGGGAGAGCGGAGTGGTGACTGGCAGGGGCGGGGTGGGGAGAGCGGAGTGGTGACTGGCAGGGGTAGCGGCCGGCAGGGGCGGGGTGGGGGGAGTGGAGTGGCGGTTGGCAGGGGCGGGGTGGGGAAAGTGGGGTGGTGGATGGCAGGGGTGGCATGGGAAGAGCAGAGTGGTGGCTGGCAGGGGCGGGGTGGGGAGAGCGGAGTGGTGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5496:HG2_PB_pbsv_8999:HG3_PB_HySA_13591:HG4_PB_pbsv_9029:HG2_PB_PB10Xdip_30269:HG3_PB_pbsv_8785:HG2_PB_PB10Xdip_30268:HG2_PB_SVrefine2Falcon2Bionano_4386:HG2_PB_SVrefine2PBcRplusDovetail_10728:HG2_PB_SVrefine2PB10Xhap12_6575:HG2_PB_SVrefine2Falcon1plusDovetail_11536:HG4_PB_SVrefine2PBcRDovetail_4459;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_30268:HG2_PB_PB10Xdip_30269;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0763957;ClusterMaxSizeDiff=0.0763957;ClusterMaxEditDist=0.250489;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=501;DistBack=-198;DistForward=196;DistMin=-198;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=278;REFWIDENED=8:844766-845043;PctSeqSimilarity=0.999;PctSizeSimilarity=0.998;PctRecOverlap=0.996;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:1/1:1:20:1:20:./.:0:0:0:0:./.:0:0:./.:1:7:.:.:.
chr8	879088	HG3_PB_pbsv_8787	C	CCCCCTCCCAGGACCCCCCGCCATCCCCCTACTAACATCCCAGACCCCTGCCATTTCCCATCTATAACCTCCCAGGACCCCCTATGCCATTCCCCCTTCTAAACCTCCATGACCCCTGCCATTCCCCTACTAAACATCCACACCCCCTGCCCATTCCCTCTAAACATCCACACCCCGCCGCCATTCCCCTGTAAACATCCACAGCCCCCCGCCATTCCCCTCTTAAATATCCAGACCCCCCGCCATTCCCCTTTCTAAACATCCCAGACCCCCCCGCCGCCATTCCCCCTACCAAACATCCCAGACCCCCCGCCATTCCCCCTCTAAACATCCCACACCACCTGCCATTCCCCTCTAAATGATCCAGACCCCCCGCCATTCCCCTCTAAACATCCCAACCCCCCCGCCATTCCCTCCCTCCAAAACATCAGGCACCCCCCGCCATTCCCCTCTAAACTTCCCACACCCACCTGCCATTACCCCCTCTAAATATCCAGAACCCCCCGCCATTCCCCCTCTAAACATCCCCAGACCCCTCCGCCCCATTCTCCCCTCCAAACATCCCAGACCCCCTGCCATTCCCACTCATAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5473:HG3_PB_pbsv_8787:HG4_PB_pbsv_9031:HG2_PB_SVrefine2Falcon1plusDovetail_11537:HG2_PB_SVrefine2PBcRplusDovetail_10729:HG2_PB_SVrefine2PB10Xhap12_6576:HG3_PB_SVrefine2Falcon1Dovetail_5497:HG4_PB_SVrefine2PBcRDovetail_4460:HG2_PB_SVrefine2Falcon2Bionano_4387;NumClusterSVs=9;ExactMatchIDs=HG3_PB_pbsv_8787;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0537728;ClusterMaxSizeDiff=0.0503036;ClusterMaxEditDist=0.138768;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=590;DistBack=17;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=492;REFWIDENED=8:878967-879458;PctSeqSimilarity=0.9491;PctSizeSimilarity=0.9797;PctRecOverlap=0.9662;SizeDiff=12;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=96;MatchId=5243.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:34:./.:0:3:0:8:./.:0:0:0:0:./.:2:0:0/1:5:11:.:.:.
chr8	1059153	HG2_PB_pbsv_9018	T	TTTGCCGGTCTGTGAGGTGTGCCACGGGTCTTGAGGTGTGCACTGCCTGACGAAGTGTCGGCTGGCATCTGTCTGAGG	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_30329:HG2_PB_assemblyticsfalcon_25929:HG2_PB_pbsv_9018:HG4_PB_pbsv_9048;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_9018;NumExactMatchSVs=1;ClusterMaxShiftDist=0.129032;ClusterMaxSizeDiff=0.116129;ClusterMaxEditDist=0.275;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=77;DistBack=181;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=8:1059152-1059154;PctSeqSimilarity=0.9278;PctSizeSimilarity=0.974;PctRecOverlap=0.7273;SizeDiff=2;StartDistance=20;EndDistance=20;GTMatch=0;TruScore=87;MatchId=5244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:28:./.:19:7:10:16:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr8	1156687	HG2_PB_pbsv_9025	C	CGCCATCCGTGGACTGGGTAGCTGTGAGCGGTTTAATCGTCCAGCCATCCGTGGAAAAACCTTTTGGGGGATTAGACTGTGAGTGATTAATCTCCAGCCCATCCGTGGGCGGCTAGACTGTGAGTGGTTAATTCCCAGCCTCCATGGGCGGGGGAGTAGACTCTGAAGTGGTAATCTCCAGCCATTCCGTGGGTACTGGGGTAGACTACGTTGAGCGGTAATCTCCAGCCATCCGTGGACTGGGTAAGACTGTGAGCGGTTAATCTCCAGCGATCCGTGGGCTGGGGTTAGGACTCGTGAGTGGTTAATCTCCAGCCATCCGTGGGGGACCTGTGGGGTTAGACTCGTGAGGTGGTTAATCTCGAGCCATCCGCTGGACTAGGGTTTAGAACTGTGACAGTTAATTTCTCCAGCCATTCCTGTGGCCTGCGGCAGACGTTGAGTGATTTACATCATCAGCCATGTCCAGGGGCCGGGTAGACTGTGATGGTTAATCCTCAGGCGTCATCCGTGGCTGCGGGCCTAGACTTGTGAGTGGTTAATCTCCAGCCATTTCCGTGGGACTGGGGTAGACTCGACTGAGCGGTAATCTCCAGGCCCATCCGTGGCCGGGTAGACTCGTGAGTCGATTAATCTCCAGCATCCATGGCGGGTTAGGACTGGGGGACAGTATATTCTCCAGCCATCCGTTGGGCTGGGTAGACTGTGAGTTGATTTTAATCTTCCAGCCATCGCGTGGGCGGGGGTGGACTGTGAGCGTTGAATCTCCAGCCATGCCGGCGAATGGACTGGGGGTAGACTCGTGAGCGGTTTAATCTCCACATCTGTGGACTGGGTAGACTGTGAGTGATTAATCTCCTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4397:HG2_PB_assemblyticsfalcon_25932:HG4_PB_pbsv_9056:HG2_PB_SVrefine2Falcon1plusDovetail_11552:HG2_PB_pbsv_9025:HG2_PB_SVrefine2Falcon1plusDovetail_11551:HG4_PB_pbsv_9055:HG3_PB_SVrefine2Falcon1Dovetail_5510:HG4_PB_SVrefine2Falcon1Dovetail_5485:HG2_PB_SVrefine2PBcRplusDovetail_10739:HG2_PB_SVrefine2PB10Xhap12_6590:HG4_PB_SVrefine2PBcRDovetail_4470;NumClusterSVs=12;ExactMatchIDs=HG2_PB_pbsv_9025;NumExactMatchSVs=1;ClusterMaxShiftDist=0.127686;ClusterMaxSizeDiff=0.115479;ClusterMaxEditDist=0.31195;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=860;DistBack=-8923;DistForward=-1;DistMin=-8923;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=371;REFWIDENED=8:1156324-1156694;PctSeqSimilarity=0.9322;PctSizeSimilarity=0.9267;PctRecOverlap=0.5552;SizeDiff=63;StartDistance=351;EndDistance=351;GTMatch=0;TruScore=80;MatchId=5245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:35:0|1:23:0:0:24:./.:0:0:0:0:0/0:26:0:0/1:28:12:1863:.:.
chr8	1231955	HG2_PB_SVrefine2Falcon1plusDovetail_11555	A	AAACCATCTGGACATGGTGTAACCTGAACCCAGCGCCCTGAACCATCCAGACATGGTGTGACCTGAACCCAGCACCATGAACCATCCGGACGTGGTGTGACCTGAACCCAGCACATGAACCATCCGGACATGGTGTGACCTGAACCCAGCACTCTGAACCATCCGGACATGGTGTGACCTGAACCCAGCGCATGTACCATCCAGACGTGGTGTGACCTGAACCCAGCACGTGAACCATCCGGACATGGTGTGACCTGAACCCAGCCCCCTGAACCATCAGGACATGGTGTGACCTGAACCCAGCGCCCTGAACCATCCGGACATGGTGTGACCTGAACCCAGCGCCCTGAACCATCCGGACGTGGTGTGACCTGAACCCAGCGCCCTGAACCATCTGGACGTGGTGTGACCTGAACCCAGCACCTGAAGCATCCAGACGTGGTGTGACCTGAACCCAGCGCCCTGAACCATCCGGACATGGTGTGACCTGAACCCAGCACATGAACCATCTGGACATGGTGTGACCTGAACCCAGCACGTGAACCATCCAGACGTGGTGTGACCTGAACCCAGCACCCTGAACCATCCGGACATGGTGTGACCTGAACCCAGCACATG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11555:HG2_PB_PB10Xdip_30345:HG2_PB_PB10Xdip_30344:HG2_PB_SVrefine2PB10Xhap12_6593:HG4_PB_SVrefine2PBcRDovetail_4473:HG4_PB_SVrefine2Falcon1Dovetail_5489:HG2_PB_SVrefine2Falcon2Bionano_4399:HG3_PB_SVrefine2Falcon1Dovetail_5513:HG2_PB_SVrefine2PBcRplusDovetail_10743;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11555:HG2_PB_SVrefine2PBcRplusDovetail_10743;NumExactMatchSVs=2;ClusterMaxShiftDist=0.145329;ClusterMaxSizeDiff=0.145329;ClusterMaxEditDist=0.202597;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=617;DistBack=2972;DistForward=89;DistMin=89;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=772;REFWIDENED=8:1231956-1232727;PctSeqSimilarity=0.9708;PctSizeSimilarity=0.9968;PctRecOverlap=0.5543;SizeDiff=2;StartDistance=-274;EndDistance=-274;GTMatch=0;TruScore=84;MatchId=5247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:78:1/1:4:36:0:15:./.:0:0:0:0:1/1:0:11:1/1:2:42:.:.:.
chr8	1278481	HG2_Ill_GATKHC_14628	G	GAGTTCTGGGTGGGAGCACCGCTTCGCGGGGACTGAGTTCTGGGTGGGACTGAGTTCTGGGTGGGAGCACTACTTCACAGGGACT	20	PASS	ClusterIDs=HG2_PB_pbsv_9039:HG3_Ill_GATKHC_14597:HG3_PB_pbsv_8820:HG2_Ill_GATKHC_14628;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHC_14628:HG3_Ill_GATKHC_14597;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0232558;ClusterMaxEditDist=0.265896;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=84;DistBack=40;DistForward=152;DistMin=40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=847;REFWIDENED=8:1278356-1279202;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:24:4:1:29:./.:0:0:0:0:./.:3:0:./.:.:.:.:.:.
chr8	1285584	HG3_Ill_MetaSV_5131	G	GGATGATGGTGATGATGATGGTGATGGTGATGATGTTGATGGTGATGATGGTGATGATGTTGATGGTGATGATGGTGATGGTGAGAATGATGGGGATGAGGATGATAGTGGTGATGAGGATGGCGATGGTGATGCTGATGATAGTGATGATGGTGCTGGTGATGATGATGGTGATGGTGATGATGGTAAGGATGATGGGAAAGAGAATGATATTGGTGATGAGGATGGTGATGGTGATGCTGATGACAGTGATGATGGTGATGATGAGGATGATGGTGGTGATGATGATGGTGATGCTGATGATGGTGATGGTGAGGATGATGGTGATGGTGAGAATGATGGTGATGATGTGACGGTGAGGATGATGGTGGTAGTGAGGATGATGGTGAGAATGATGGTGAGGAAGATGGTGGTGAGGATAATGGTGATGGTGAGAATGATGGTGAGGATGATGGTGGTGAGGATAATGGTGATGGTGAGGATGATGACGGTGAGAATGATGATGGTGATGGTGAGGATGATGGTGGTAGTGAGGATGATAATGGTGAGAATGACGGTGAGGGTGATGGTGGTGAGGATAATGGTGATGGTGAGGATGATGACAGTGAGGATGATGATGATGGTGAGGATGATGGTGGTGAGGATAATGGTGATGATGAGGATGATGGTGGTGAGGATAATGGTGATGGTGAGGATGATGACGGTGAGAATGAAGATGATGGTGATGGTGACGATGATGGTGGTAGTGAGGGTGATGATGGTGAGAATTATGGTGAGGATGATGGTGGTGAGGATGGTGATGGTGATGCTGATGACTGAT	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_6455:HG3_PB_HySA_13601:HG4_PB_pbsv_9077:HG2_PB_pbsv_9040:HG4_PB_HySA_13188:HG4_Ill_MetaSV_5191:HG3_Ill_MetaSV_5131:HG2_PB_PB10Xdip_30360:HG2_PB_PB10Xdip_30361:HG2_PB_SVrefine2Falcon2Bionano_4402:HG4_PB_SVrefine2PBcRDovetail_4475:HG2_PB_SVrefine2PB10Xhap12_6596:HG4_PB_SVrefine2Falcon1Dovetail_5491:HG3_PB_SVrefine2Falcon1Dovetail_5517:HG3_PB_pbsv_8821;NumClusterSVs=15;ExactMatchIDs=HG3_Ill_MetaSV_5131;NumExactMatchSVs=1;ClusterMaxShiftDist=0.210068;ClusterMaxSizeDiff=0.201359;ClusterMaxEditDist=0.30578;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=819;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=443;REFWIDENED=8:1285291-1285733;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9927;PctRecOverlap=0.9927;SizeDiff=-6;StartDistance=-2;EndDistance=-2;GTMatch=1;TruScore=99;MatchId=5249.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:31:1/1:2:17:2:23:./.:0:0:0:0:1/1:0:16:1/1:3:156:11810:.:.
chr8	1292249	HG2_PB_SVrefine2Falcon2Bionano_4403	C	CGTACTCGGGGCCCTGTCGTGGGTCCATGTATTCGGGGCCCTGTCGTGGGTCCGTGTACTCGGGGCCCTGTCGTAAGTCCGTGTACTGGGTGCCCTGTCGTGAGTCCGTGTACTGTGGGCCCTGTCGTGGGTCCGTGTACTCGGGGCCCTGTCGTAAGTCCGTGTACTGGGTGCCCTGTCGTGGGTCCGT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5518:HG4_PB_SVrefine2Falcon1Dovetail_5492:HG4_Ill_manta_2209:HG4_PB_pbsv_9079:HG4_Ill_MetaSV_5192:HG2_Ill_breakscan11_3929:HG2_PB_pbsv_9041:HG4_PB_SVrefine2PBcRDovetail_4476:HG4_Ill_SVrefine2DISCOVARDovetail_6456:HG2_PB_SVrefine2Falcon2Bionano_4403;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4403:HG4_Ill_SVrefine2DISCOVARDovetail_6456:HG4_PB_SVrefine2PBcRDovetail_4476;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0987013;ClusterMaxSizeDiff=0.0831169;ClusterMaxEditDist=0.260652;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=189;DistBack=5199;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=130;REFWIDENED=8:1292250-1292379;PctSeqSimilarity=0.9851;PctSizeSimilarity=1;PctRecOverlap=0.7619;SizeDiff=0;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=91;MatchId=5250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:24:./.:18:7:5:13:./.:0:0:0:0:0/1:18:6:./.:.:.:11810:.:.
chr8	1293379	HG4_Ill_Krunchall_12802	G	GTATCCTCTGCTGAAGATGCAGGCTCAGTTCCTTCAGGGCAGAGTGTGCGCTACTA	20	PASS	ClusterIDs=HG2_PB_pbsv_9042:HG4_Ill_svaba_11458:HG4_Ill_manta_2210:HG4_Ill_Krunchall_12802:HG4_Ill_GATKHC_14686:HG4_Ill_250bpfermikitraw_12157:HG4_Ill_150bpfermikitraw_11662:HG2_Ill_svaba_11347:HG2_Ill_manta_2569:HG2_Ill_SpiralSDKrefine_16563:HG2_Ill_Krunchall_12519:HG2_Ill_GATKHC_14630:HG2_Ill_250bpfermikitraw_12205:HG2_Ill_150bpfermikitraw_11473;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11473:HG2_Ill_250bpfermikitraw_12205:HG2_Ill_GATKHC_14630:HG2_Ill_Krunchall_12519:HG2_Ill_SpiralSDKrefine_16563:HG2_Ill_manta_2569:HG2_Ill_svaba_11347:HG4_Ill_150bpfermikitraw_11662:HG4_Ill_250bpfermikitraw_12157:HG4_Ill_GATKHC_14686:HG4_Ill_Krunchall_12802:HG4_Ill_manta_2210:HG4_Ill_svaba_11458;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0695652;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.173913;PBcalls=1;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=-1;DistForward=1142;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=114;REFWIDENED=8:1293374-1293487;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:22:./.:20:5:5:12:./.:0:0:0:0:0/1:19:27:./.:.:.:11810:.:.
chr8	1332456	HG2_PB_SVrefine2PB10Xhap12_6601	T	TGGCCTATGCCCGGCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGGCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGGCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGGCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGGCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGGCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGGCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCAGCCCCTGAGAACTTGGTGCACAGTTACCCCAGCCTGTGCCCGTCCCCTGAGAACTTCATGCACAGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTATGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGGCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTATGCCCGGCCCCTGAGAACTTGGTGCACGGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGGCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGTCCCCTGAGAACTTGGTGCACAGTTACCCCGGCCTGTGCCCGGCCCCTGAGAAATTGGTGCACAGTTACCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11560:HG4_PB_SVrefine2Falcon1Dovetail_5498:HG3_PB_SVrefine2Falcon1Dovetail_5522:HG2_PB_SVrefine2Falcon2Bionano_4407:HG2_PB_pbsv_9046:HG2_PB_SVrefine2PBcRplusDovetail_10748:HG2_PB_SVrefine2PB10Xhap12_6601;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6601:HG2_PB_SVrefine2PBcRplusDovetail_10748;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0581336;ClusterMaxSizeDiff=0.0581336;ClusterMaxEditDist=0.222801;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1008;DistBack=4405;DistForward=431;DistMin=431;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=115;REFWIDENED=8:1332457-1332571;PctSeqSimilarity=0.9494;PctSizeSimilarity=0.875;PctRecOverlap=0.5917;SizeDiff=126;StartDistance=-349;EndDistance=-349;GTMatch=0;TruScore=80;MatchId=5252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:51:1/1:3:29:1:7:./.:0:0:0:0:./.:0:6:0/1:11:19:11810:.:.
chr8	1365317	HG2_PB_PB10Xdip_30386	TCTGAGTGAAGG	CGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGGTGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGGTGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGGTGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTCATTTAGCGTCTGAGGCGGGGGAGACCATCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGGTGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGGTGGGGAGACCGTCTGAGGCAGGGGAGACCCCCGTTCATTCATTTAGCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCATTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCAGGGGAGACCCCCGTTCATTCATTTAGCGTCTGAGGCGGGGAGACCCCTGTTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGGGGAGACCCCCGTTCATTCATTTAGCGTCTGAGGCGGGGGAGACCGTCTGAGGCGGA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_30386:HG2_PB_pbsv_9050:HG4_PB_pbsv_9089:HG2_PB_SVrefine2Falcon1plusDovetail_11563:HG3_PB_SVrefine2Falcon1Dovetail_5526:HG4_PB_SVrefine2Falcon1Dovetail_5502:HG2_PB_SVrefine2PBcRplusDovetail_10751:HG2_PB_SVrefine2Falcon2Bionano_4410:HG2_PB_SVrefine2PB10Xhap12_6604:HG2_PB_PB10Xdip_30387;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_30386:HG2_PB_PB10Xdip_30387;NumExactMatchSVs=2;ClusterMaxShiftDist=0.227754;ClusterMaxSizeDiff=0.227754;ClusterMaxEditDist=0.243462;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1230;DistBack=28;DistForward=90;DistMin=28;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=148;REFWIDENED=8:1365271-1365418;PctSeqSimilarity=0.9421;PctSizeSimilarity=0.8907;PctRecOverlap=0.8993;SizeDiff=-151;StartDistance=47;EndDistance=58;GTMatch=0;TruScore=91;MatchId=5253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:1:19:0:27:./.:0:0:0:0:1/1:0:8:0/1:11:83:11810:.:.
chr8	1378177	HG2_Ill_GATKHC_14637	T	TATATATATATATATATATATATATATATACATATATATATATATATATATATATATATAC	20	PASS	ClusterIDs=HG2_PB_pbsv_9053:HG4_Ill_GATKHC_14696:HG4_Ill_GATKHCSBGrefine_6251:HG4_Ill_250bpfermikitraw_12162:HG2_Ill_scalpel_8641:HG2_Ill_manta_2571:HG2_Ill_GATKHC_14637:HG2_Ill_150bpfermikitraw_11478:HG2_PB_PB10Xdip_30393:HG2_PB_PB10Xdip_30392:HG2_PB_SVrefine2Falcon2Bionano_4412:HG4_PB_pbsv_9092:HG2_PB_SVrefine2PBcRplusDovetail_10753:HG2_PB_SVrefine2PB10Xhap12_6606;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11478:HG2_Ill_GATKHC_14637:HG2_Ill_manta_2571:HG2_Ill_scalpel_8641:HG4_Ill_250bpfermikitraw_12162:HG4_Ill_GATKHCSBGrefine_6251:HG4_Ill_GATKHC_14696;NumExactMatchSVs=7;ClusterMaxShiftDist=0.184874;ClusterMaxSizeDiff=0.184874;ClusterMaxEditDist=0.27907;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=1;DistForward=1840;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=17;REFWIDENED=8:1378176-1378195;PctSeqSimilarity=0.9833;PctSizeSimilarity=0.9667;PctRecOverlap=0.9672;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=5254.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:38:1|0:8:35:23:3:./.:0:0:0:0:0/1:17:12:./.:.:.:.:.:.
chr8	1404972	HG3_PB_SVrefine2Falcon1Dovetail_5532	C	CGTGAGCCCGGGTGCCTGCACTCTGGTCGTTGGACGTCAGCAGGCTGTGCCAGGCCGTGCTCTGGTGAAATCGGTTTTGCAAGGGAGCTCTATGATGCT	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_6661:HG3_PB_SVrefine2PBcRDovetail_4059:HG3_PB_assemblyticsfalcon_25847:HG3_PB_pbsv_8831:HG2_PB_PB10Xdip_30405:HG4_PB_pbsv_9094:HG2_PB_PB10Xdip_30404:HG2_PB_pbsv_9056:HG2_PB_SVrefine2PBcRplusDovetail_10757:HG2_Ill_scalpel_8642:HG4_PB_SVrefine2PBcRDovetail_4484:HG4_Ill_scalpel_8417:HG4_Ill_SVrefine2DISCOVARDovetail_6461:HG4_Ill_Krunchall_12806:HG4_Ill_GATKHC_14698:HG4_Ill_250bpfermikitraw_12163:HG3_PB_SVrefine2Falcon1Dovetail_5532:HG3_Ill_scalpel_8756:HG3_Ill_manta_2102:HG3_Ill_Krunchall_12208:HG3_Ill_GATKHC_14610:HG2_Ill_manta_2572:HG2_Ill_SVrefine2DISCOVARplusDovetail_12590:HG2_Ill_GATKHC_14639:HG2_Ill_GATKHCSBGrefine_6140:HG2_Ill_250bpfermikitraw_12210:HG2_10X_SVrefine210Xhap12_6440:HG2_PB_SVrefine2PBcRplusDovetail_10756:HG2_PB_SVrefine2PB10Xhap12_6609:HG2_PB_SVrefine2Falcon2Bionano_4414:HG2_PB_SVrefine2Falcon1plusDovetail_11567:HG2_10X_SVrefine210Xhap12_6439;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6440:HG2_Ill_250bpfermikitraw_12210:HG2_Ill_GATKHCSBGrefine_6140:HG2_Ill_GATKHC_14639:HG2_Ill_SVrefine2DISCOVARplusDovetail_12590:HG2_Ill_manta_2572:HG3_Ill_GATKHC_14610:HG3_Ill_Krunchall_12208:HG3_Ill_manta_2102:HG3_Ill_scalpel_8756:HG3_PB_SVrefine2Falcon1Dovetail_5532:HG4_Ill_250bpfermikitraw_12163:HG4_Ill_GATKHC_14698:HG4_Ill_Krunchall_12806:HG4_Ill_SVrefine2DISCOVARDovetail_6461:HG4_Ill_scalpel_8417:HG4_PB_SVrefine2PBcRDovetail_4484;NumExactMatchSVs=17;ClusterMaxShiftDist=0.204082;ClusterMaxSizeDiff=0.183673;ClusterMaxEditDist=0.302083;PBcalls=14;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=98;DistBack=-2122;DistForward=49;DistMin=-2122;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=185;REFWIDENED=8:1404898-1405082;PctSeqSimilarity=0.9949;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5255.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:53:1/1:5:37:1:21:./.:0:0:0:0:1/1:2:26:./.:.:.:.:1624:.
chr8	1407343	HG4_Ill_150bpfermikitraw_11666	C	CAGCCAGCTGGTTTACATGCATATACCTGAGGGGTCACCCTACAAGACCAGCGTGCGTCCCAGACAGGAGTGAT	20	PASS	ClusterIDs=HG2_PB_pbsv_9057:HG4_Ill_150bpfermikitraw_11666:HG4_PB_pbsv_9095;NumClusterSVs=3;ExactMatchIDs=HG4_Ill_150bpfermikitraw_11666;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115385;ClusterMaxSizeDiff=0.102564;ClusterMaxEditDist=0.240506;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=249;DistForward=97;DistMin=97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=435;REFWIDENED=8:1407096-1407530;PctSeqSimilarity=0.9916;PctSizeSimilarity=1;PctRecOverlap=0.3836;SizeDiff=0;StartDistance=45;EndDistance=45;GTMatch=0;TruScore=79;MatchId=5256.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:18:0|1:22:3:0:20:./.:0:0:0:0:0/1:15:3:./.:.:.:.:1624:.
chr8	1412585	HG3_PB_pbsv_8836	T	TTTCCGCGGACGGCACCTTCCAGGACAGCTCCTTTCCAGGGAACAACACCCTTCCAGGATAGCTTCCTTCCATGGGGTTAGCTCTCCTTACAGGTCAGCCATCCTTCTCAGGGACAACACCCTGTCCAGGACGGCACCCTATCCAGGACCGCACCCTTCTCAGGACGGCACCCTTTTAGACGACATCTTCTTCCAGGACAGCTCCCCTCTCCAGGACGGGCTCCCTTCCAGGGGGACAACACTCCTTCCAGGTACGGGCTCCCTTTCCAGGACTAGCAATCTCTTCCAGGACGAACACCCTTTCCAGGACACACCTTCCAGGCGACCAGCTCCTTCAAGAAAGCACCCGTCCAGGACAGCTCCCTTCCAGCCCACAGCTTCCCTTCCAGATAGCACCTTCCAGGACCAGCACCCTTCCAGGTACAATCACCCTTCCAGGCAGCATCCCTTTCCAGGACAGCTCCCTTTCCAGGACGACACCCTTCCAGGACAACACCCTTTCCAGGACAGCTCCCTTCCAGGACAGCAACCTTCCAGGACAACACTCCTTTCCAGGGTGACAACACCCTTCCAGACCAGTCACCCTTCCAGGACAACACTCTTCCAGGACGGGCTCCCTGTCTATGGACAACGCCCCTTCCAGGACTGGCACCTTCCAGAGACAACACCCTTCCAGGGATGGACCCTTCCAGGATTAGCTCCC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_6663:HG4_PB_SVrefine2Falcon1Dovetail_5508:HG3_PB_pbsv_8836:HG2_PB_SVrefine2PBcRplusDovetail_10759:HG4_PB_pbsv_9096:HG2_PB_SVrefine2PB10Xhap12_6611;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_8836;NumExactMatchSVs=1;ClusterMaxShiftDist=0.144817;ClusterMaxSizeDiff=0.143293;ClusterMaxEditDist=0.292035;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=702;DistBack=35;DistForward=6326;DistMin=35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=296;REFWIDENED=8:1412293-1412588;PctSeqSimilarity=0.9295;PctSizeSimilarity=0.9345;PctRecOverlap=0.7539;SizeDiff=46;StartDistance=150;EndDistance=150;GTMatch=0;TruScore=87;MatchId=5257.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:22:0|1:19:1:2:21:./.:0:0:0:0:0/1:17:3:0/1:15:10:.:1624:.
chr8	1528839	HG2_Ill_250bpfermikitraw_12213	T	TACACATCTACACACCACAGTCGAACTACCAGAAGTGAAGGATACAGACAAAACCGC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12213:HG3_PB_pbsv_8847:HG3_PB_assemblyticsfalcon_25859:HG4_Ill_GATKHCSBGrefine_6257:HG4_Ill_250bpfermikitraw_12169:HG3_Ill_GATKHCSBGrefine_6074:HG3_Ill_250bpfermikitraw_11862:HG2_Ill_GATKHCSBGrefine_6144;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12213:HG4_Ill_GATKHCSBGrefine_6257:HG4_Ill_250bpfermikitraw_12169:HG3_Ill_GATKHCSBGrefine_6074:HG3_Ill_250bpfermikitraw_11862:HG2_Ill_GATKHCSBGrefine_6144;NumExactMatchSVs=6;ClusterMaxShiftDist=0.156522;ClusterMaxSizeDiff=0.156522;ClusterMaxEditDist=0.173913;PBcalls=2;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=7815;DistForward=105;DistMin=105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1088;REFWIDENED=8:1528828-1529915;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:0|1:24:5:1:17:./.:0:0:0:0:0/1:26:8:./.:.:.:1868:.:.
chr8	1530360	HG2_Ill_GATKHC_14645	C	CCCCCACACACATGTACACACCACAGTCAAACTACCAGAAGTGAAGGATACAGACAAG	20	PASS	ClusterIDs=HG2_Ill_GATKHC_14645:HG2_PB_pbsv_9067:HG4_Ill_GATKHC_14707;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_GATKHC_14645:HG4_Ill_GATKHC_14707;NumExactMatchSVs=2;ClusterMaxShiftDist=0.034188;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.119658;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=463;DistForward=45;DistMin=45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=110;REFWIDENED=8:1530359-1530471;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5259.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:0|1:30:2:3:19:./.:0:0:0:0:./.:3:0:./.:.:.:1868:.:.
chr8	1646790	HG4_Ill_GATKHCSBGrefine_6258	C	CTGCATGGGACTAGACAGGTCCAAGTAAGCCATGCGTGGGACAGGTCTATGTAAGCCA	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_25869:HG2_PB_PB10Xdip_29506:HG4_PB_pbsv_9109:HG4_Ill_GATKHC_14716:HG2_PB_pbsv_9074:HG4_Ill_GATKHCSBGrefine_6258:HG4_Ill_150bpfermikitraw_11676:HG2_Ill_GATKHC_14653:HG2_Ill_GATKHCSBGrefine_6146;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6146:HG2_Ill_GATKHC_14653:HG4_Ill_150bpfermikitraw_11676:HG4_Ill_GATKHCSBGrefine_6258:HG4_Ill_GATKHC_14716;NumExactMatchSVs=5;ClusterMaxShiftDist=0.107143;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.237288;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=9;DistForward=46;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=46;REFWIDENED=8:1646789-1646837;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:31:0|1:23:2:1:22:./.:0:0:0:0:0/1:13:2:./.:.:.:.:.:.
chr8	1845835	HG2_PB_pbsv_9087	T	TCGTAAGGGATCCGGATCGGCAGTTCCCATCCTCGACAGTTGTGGCTCTGTCCTAAGGCATCGGATTGCAGTTCCCACTCTCCGACAGTTGTGAGCTCTGTCCTAAGGGATCGGGTCGCAGTTTCCCCTCTGGACAGCTGTGGCTCTGTCCTAAAGGCAATCGGATCGCAGTTCCACCTCTCGACGTTGTGGGCTCTGTTAAGGGATCGGATCGCAGTTCCCACTCTCGAAGCTGTGGGCTTCGTCCTAAGGCATCGGATCGCAGTTCCCCCTCCTGGACAGCTTGTGGGCTCATGTCCAAAGGGATCGATCGCAGTTTCACTCTCGACAGCTGTGGGCTCTGTCCTAAGGGATCGGATCGCAGTTCCCACTGTGTGACAGTTGTGGCCTCTGTCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11587:HG3_PB_pbsv_8868:HG2_PB_pbsv_9087:HG2_PB_SVrefine2Falcon2Bionano_4428;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_9087;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0653266;ClusterMaxSizeDiff=0.0552764;ClusterMaxEditDist=0.18593;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=396;DistBack=175;DistForward=13611;DistMin=175;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=345;REFWIDENED=8:1845491-1845835;PctSeqSimilarity=0.9599;PctSizeSimilarity=0.9874;PctRecOverlap=0.3829;SizeDiff=5;StartDistance=242;EndDistance=242;GTMatch=0;TruScore=77;MatchId=5265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:29:1:1:25:./.:0:0:0:0:0/0:38:0:0/1:22:3:.:.:.
chr8	1860707	HG2_Ill_Cortex_8684	G	CTGCAGTGTTCAACTCAGCAGAGAGCTCCCGTCCCTGCAAAGGCGCCATATGTATTGTGCTTTGCTGTGCGGTGTTCGACTTAGCAGAGAGCTCGCTGTCCCCGCAAAAGCGCTGTGTGGATTGTGAGTTTGCTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6457:HG3_PB_assemblyticsfalcon_25883:HG4_PB_assemblyticsfalcon_25423:HG2_Ill_breakscan11_3931:HG3_PB_pbsv_8869:HG2_PB_pbsv_9088:HG3_Ill_GATKHCSBGrefine_6082:HG2_Ill_GATKHCSBGrefine_6151:HG3_PB_SVrefine2Falcon1Dovetail_5552:HG3_Ill_manta_2104:HG3_Ill_Spiral_9566:HG3_Ill_Cortex_3594:HG2_Ill_manta_2574:HG2_Ill_SpiralSDKrefine_16577:HG2_Ill_SVrefine2DISCOVARplusDovetail_12597:HG2_Ill_Cortex_8684:HG3_Ill_MetaSV_5139:HG2_Ill_MetaSV_4959:HG3_PB_HySA_13607:HG2_PB_HySA_16345:HG4_PB_SVrefine2Falcon1Dovetail_5526:HG2_PB_SVrefine2PBcRplusDovetail_10776:HG2_PB_SVrefine2Falcon1plusDovetail_11588;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_Cortex_8684:HG2_Ill_SVrefine2DISCOVARplusDovetail_12597:HG2_Ill_SpiralSDKrefine_16577:HG2_Ill_manta_2574:HG3_Ill_Cortex_3594:HG3_Ill_Spiral_9566:HG3_Ill_manta_2104;NumExactMatchSVs=7;ClusterMaxShiftDist=0.161538;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.216216;PBcalls=10;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=134;DistBack=-80;DistForward=6248;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:1860708-1860706;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=0.9407;SizeDiff=0;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=97;MatchId=5266.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:0|1:24:2:1:23:./.:0:0:0:0:0/1:19:12:./.:.:.:.:.:.
chr8	2086937	HG3_Ill_SVrefine2DISCOVARDovetail_6671	T	TCCGACACACACTGCCAGCACCACCACCAGAGACCCGACACACACTGCCAGCACCACCACCAGAGAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5537:HG2_PB_PB10Xdip_29570:HG2_PB_PB10Xdip_29569:HG3_PB_SVrefine2PBcRDovetail_4087:HG3_Ill_SVrefine2DISCOVARDovetail_6671:HG3_Ill_250bpfermikitraw_11880:HG2_PB_SVrefine2PBcRplusDovetail_10786:HG2_PB_SVrefine2PB10Xhap12_6646:HG2_PB_SVrefine2Falcon2Bionano_4437:HG2_PB_SVrefine2Falcon1plusDovetail_11597:HG2_Ill_SVrefine2DISCOVARplusDovetail_12602:HG2_Ill_250bpfermikitraw_12230;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12230:HG2_Ill_SVrefine2DISCOVARplusDovetail_12602:HG2_PB_SVrefine2Falcon1plusDovetail_11597:HG2_PB_SVrefine2Falcon2Bionano_4437:HG2_PB_SVrefine2PB10Xhap12_6646:HG2_PB_SVrefine2PBcRplusDovetail_10786:HG3_Ill_250bpfermikitraw_11880:HG3_Ill_SVrefine2DISCOVARDovetail_6671:HG3_PB_SVrefine2PBcRDovetail_4087;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0151515;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.030303;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=11192;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=100;REFWIDENED=8:2086938-2087037;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5268.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:47:1/1:0:23:5:18:./.:0:0:0:0:0/1:6:15:./.:.:.:.:.:.
chr8	3047236	HG2_PB_SVrefine2PB10Xhap12_6663	T	TAAGATGATGAGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAACTACAAAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGTCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29849:HG3_PB_pbsv_8906:HG4_PB_pbsv_9159:HG3_Ill_MetaSV_5148:HG2_PB_assemblyticsfalcon_26010:HG2_PB_HySA_16365:HG2_PB_SVrefine2Falcon1plusDovetail_11606:HG4_PB_SVrefine2Falcon1Dovetail_5551:HG2_PB_SVrefine2PBcRplusDovetail_10795:HG2_PB_SVrefine2PB10Xhap12_6663:HG2_PB_SVrefine2Falcon2Bionano_4446:HG3_PB_SVrefine2Falcon1Dovetail_5577:HG2_Ill_breakscan11_3932:HG2_PB_PB10Xdip_29850;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4446:HG2_PB_SVrefine2PB10Xhap12_6663:HG2_PB_SVrefine2PBcRplusDovetail_10795;NumExactMatchSVs=3;ClusterMaxShiftDist=0.145897;ClusterMaxSizeDiff=0.145897;ClusterMaxEditDist=0.18845;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=6287;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=8:3047237-3047250;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:1/1:0:17:0:12:./.:0:0:0:0:1/1:0:25:1/1:2:55:.:.:.
chr8	3067980	HG2_Ill_GATKHC_14689	A	ATATATATAGGAATATACATATATATGACCTATATATATAGGAATATACATATATATGACCTATATATATATAGGAATATACATATATATGACCTATC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5552:HG2_PB_PB10Xdip_29852:HG2_PB_PB10Xdip_29851:HG2_PB_HySA_16366:HG4_Ill_manta_2216:HG4_Ill_GATKHC_14756:HG4_Ill_GATKHCSBGrefine_6288:HG4_Ill_250bpfermikitraw_12204:HG3_Ill_manta_2110:HG3_Ill_Krunchall_12244:HG3_Ill_GATKHC_14663:HG3_Ill_GATKHCSBGrefine_6102:HG3_Ill_250bpfermikitraw_11898:HG2_Ill_manta_2580:HG2_Ill_SVrefine2DISCOVARplusDovetail_12617:HG2_Ill_Krunchall_12552:HG2_Ill_GATKHC_14689:HG2_Ill_GATKHCSBGrefine_6165:HG2_Ill_250bpfermikitraw_12241:HG2_Ill_150bpfermikitraw_11508:HG2_PB_pbsv_9123:HG3_PB_HySA_13624:HG3_PB_pbsv_8907:HG2_PB_SVrefine2PBcRplusDovetail_10796:HG2_PB_SVrefine2PB10Xhap12_6664:HG2_PB_SVrefine2Falcon2Bionano_4447:HG2_PB_SVrefine2Falcon1plusDovetail_11607:HG2_Ill_SVrefine2DISCOVARplusDovetail_12616;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11508:HG2_Ill_250bpfermikitraw_12241:HG2_Ill_GATKHCSBGrefine_6165:HG2_Ill_GATKHC_14689:HG2_Ill_Krunchall_12552:HG2_Ill_SVrefine2DISCOVARplusDovetail_12617:HG2_Ill_manta_2580:HG3_Ill_250bpfermikitraw_11898:HG3_Ill_GATKHCSBGrefine_6102:HG3_Ill_GATKHC_14663:HG3_Ill_Krunchall_12244:HG3_Ill_manta_2110:HG4_Ill_250bpfermikitraw_12204:HG4_Ill_GATKHCSBGrefine_6288:HG4_Ill_GATKHC_14756:HG4_Ill_manta_2216;NumExactMatchSVs=16;ClusterMaxShiftDist=0.117073;ClusterMaxSizeDiff=0.107317;ClusterMaxEditDist=0.219048;PBcalls=11;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=97;DistBack=12;DistForward=82;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=105;REFWIDENED=8:3067932-3068036;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5270.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:4:27:1:25:./.:0:0:0:0:./.:4:48:./.:.:.:.:.:.
chr8	3415484	HG2_PB_SVrefine2Falcon2Bionano_4450	T	TACTACTCCAATGATGAATGGTGCCTCAGTGGTACCCTGTGTCCACTCCTCCAATGATGAATGGTGCCTCAGAAGTAACCCGTGTCCACTCCTCTGATGATGAATAGTGCCTCAATAGTACCCCGTGTCGACTCCTCCAATGATGAATGGTGCCTCAATGGTACCCCGTGTCCACTCCTCCAATGATGAATGGTGCCTCAATAGCACCCCGTGTCCACTCCTCCAATGATGAATAGTGCCTCAGTAGTACCCCGTATCCCCTCCTCCAATGACAAATAGTGCCTCAATAGTACCCTGTGTCCACTCCTCCAGTGATGAATGGTGCCTCAATGGAACTCCGTGTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4450:HG4_PB_HySA_13209:HG2_PB_PB10Xdip_29933:HG2_PB_SVrefine2PBcRplusDovetail_10798:HG2_PB_SVrefine2PB10Xhap12_6668;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4450:HG2_PB_SVrefine2PBcRplusDovetail_10798:HG2_PB_SVrefine2PB10Xhap12_6668;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0144718;ClusterMaxSizeDiff=0.00868307;ClusterMaxEditDist=0.144509;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=344;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=905;REFWIDENED=8:3415485-3416389;PctSeqSimilarity=0.9824;PctSizeSimilarity=1;PctRecOverlap=0.5159;SizeDiff=0;StartDistance=-167;EndDistance=-167;GTMatch=0;TruScore=83;MatchId=5271.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:25:./.:0:22:15:5:./.:0:0:0:0:./.:1:0:./.:2:3:.:.:.
chr8	3626960	HG2_PB_SVrefine2PBcRplusDovetail_10801	T	TAAAGTGACAGGCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCATGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_16395:HG2_PB_pbsv_9134:HG2_PB_assemblyticsfalcon_26027:HG3_PB_HySA_13644:HG2_PB_SVrefine2PB10Xhap12_6671:HG3_PB_SVrefine2PBcRDovetail_4104:HG2_PB_SVrefine2PBcRplusDovetail_10801:HG2_PB_SVrefine2Falcon2Bionano_4453:HG2_PB_PB10Xdip_29936:HG2_PB_PB10Xdip_29937:HG2_PB_SVrefine2Falcon1plusDovetail_11612:HG2_Ill_breakscan11_3933:HG3_PB_pbsv_8918;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_10801:HG3_PB_SVrefine2PBcRDovetail_4104;NumExactMatchSVs=2;ClusterMaxShiftDist=0.121212;ClusterMaxSizeDiff=0.121212;ClusterMaxEditDist=0.18448;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=330;DistBack=39475;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=8:3626961-3626974;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5272.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:39:./.:2:21:12:24:./.:0:0:0:0:0/1:21:8:0/1:7:27:.:.:.
chr8	4116036	HG2_PB_PB10Xdip_29947	G	GAGGGAGGGAGGGAGGGAGGGGAGGATGGAAGGAGGGAGGGAGGGAGGGAGGGGAGGATGGAAGGAGGGAGGGAGGGGAGGACAGAGGGAGGGAGGGAGGGGAGGATGGAAGGAGGGAGGGAGGGGAGGACAGAGGGAGGGAGGGAGGGGAGGATGGAAGGAGGGAGGGAGGGGAGGACAGAGGGAGGGAGGGAGGGGAGGACGGAAGGAGGGAAGGAGGGAGGCGAGGCTAGAAGGAGGGAGGGATGGAGGGAGGGATGGAAGGATGGAGGGAGGAAAGAATGGAGGGAGGGAGGGAAGAATGGAGGGAGGGAGGGAGGGAAGAATGGAGGAAGGGAGGGAGGGAGGGAAGAATGGAGGAAGGGAGGGATGGAGGGAAGAATGGAGGGAGGGAGGGAGGGAGGGAAGAATGGAGGGAGGGAGGGAAGGAAGAATGGAGGGAGGTAAGAATGGAGGGAGGGAGGGAAGAATGCAGGGAGGGAGGGAGGGAAGAATGCAGAGAGGGAGGGAAGAATGGAAGAATGGAGGGAGGGAAGAATGGAGGGAGGGAAGAGTGGAAGAATGGAGAGAGGGAAGAGTGGAAGAATGGAGGGAGGGAAGAGTGGAAAAATGGAGGGAGCGAGTGAGGGAGGGAAGAATGGAAGAATGGAAGAATGGAGGGAGGGAAGAATGCAAGACTGGAGGGAGGGAAGAATGCAAGACTGGAGGGAGGGAAGAATGGAAGAATGGACGGAAGGAAGAGTGGAAGAATGGAGGGAGGGAGGGAGGGAGGGAGGCAGGGAAGAGTGGAAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11616:HG3_PB_HySA_13662:HG4_PB_pbsv_9174:HG2_PB_SVrefine2PBcRplusDovetail_10806:HG2_PB_PB10Xdip_29948:HG2_PB_PB10Xdip_29947:HG2_PB_pbsv_9141:HG2_PB_SVrefine2Falcon2Bionano_4457:HG2_PB_SVrefine2Falcon1plusDovetail_11617:HG3_PB_SVrefine2Falcon1Dovetail_5584:HG2_PB_SVrefine2PB10Xhap12_6677:HG2_PB_SVrefine2PBcRplusDovetail_10805:HG3_PB_SVrefine2PBcRDovetail_4108;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_29947:HG2_PB_PB10Xdip_29948;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0697674;ClusterMaxSizeDiff=0.0697674;ClusterMaxEditDist=0.264858;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=791;DistBack=-1;DistForward=38;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=8:4116031-4116037;PctSeqSimilarity=0.9994;PctSizeSimilarity=0.9987;PctRecOverlap=0.9975;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5273.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:32:1/1:2:14:0:14:./.:0:0:0:0:1/1:0:13:0/1:4:30:.:.:.
chr8	4452893	HG4_Ill_GATKHC_14798	T	TCGATGCATTCATTTTCTTTTTTTTTTTTTTTTCTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30078:HG2_PB_assemblyticsfalcon_26052:HG4_PB_assemblyticsfalcon_25490:HG4_PB_pbsv_9178:HG2_PB_SVrefine2Falcon2Bionano_4460:HG3_PB_pbsv_8930:HG2_PB_pbsv_9145:HG2_PB_HySA_16414:HG4_PB_HySA_13233:HG4_Ill_svaba_11556:HG4_Ill_SVrefine2DISCOVARDovetail_6499:HG3_Ill_svaba_11557:HG2_Ill_svaba_11445:HG2_PB_SVrefine2PBcRplusDovetail_10810:HG2_PB_SVrefine2PB10Xhap12_6682:HG2_PB_SVrefine2Falcon1plusDovetail_11621:HG4_PB_SVrefine2PBcRDovetail_4519:HG4_PB_SVrefine2Falcon1Dovetail_5564:HG4_Ill_GATKHC_14798:HG4_Ill_GATKHCSBGrefine_6303:HG3_PB_SVrefine2Falcon1Dovetail_5588:HG3_Ill_Spiral_9608:HG3_Ill_GATKHCSBGrefine_6120:HG2_Ill_manta_2588:HG2_Ill_SVrefine2DISCOVARplusDovetail_12626:HG2_Ill_GATKHCSBGrefine_6184:HG2_Ill_150bpfermikitraw_11548:HG2_10X_SVrefine210Xhap12_6484:HG2_PB_PB10Xdip_30079;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6484:HG2_Ill_150bpfermikitraw_11548:HG2_Ill_GATKHCSBGrefine_6184:HG2_Ill_SVrefine2DISCOVARplusDovetail_12626:HG2_Ill_manta_2588:HG3_Ill_GATKHCSBGrefine_6120:HG3_Ill_Spiral_9608:HG3_PB_SVrefine2Falcon1Dovetail_5588:HG4_Ill_GATKHCSBGrefine_6303:HG4_Ill_GATKHC_14798:HG4_PB_SVrefine2Falcon1Dovetail_5564:HG4_PB_SVrefine2PBcRDovetail_4519;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0594059;ClusterMaxEditDist=0.21256;PBcalls=16;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=5;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=98;DistBack=16;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:4452894-4452893;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5274.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:4:22:0:26:./.:0:0:0:0:1/1:0:15:./.:.:.:.:.:.
chr8	5829282	HG2_Ill_MetaSV_4976	T	TTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGGCCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGTGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATGCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTAC	20	PASS	ClusterIDs=HG3_PB_pbsv_8941:HG4_PB_assemblyticsfalcon_25503:HG2_PB_assemblyticsfalcon_26065:HG2_PB_SVrefine2Falcon1plusDovetail_11625:HG3_Ill_MetaSV_5156:HG2_PB_SVrefine2PBcRplusDovetail_10816:HG2_Ill_MetaSV_4976:HG2_PB_pbsv_9156:HG4_Ill_MetaSV_5217:HG2_PB_PB10Xdip_30108:HG2_PB_PB10Xdip_30107:HG4_PB_SVrefine2Falcon1Dovetail_5567:HG2_PB_SVrefine2Falcon2Bionano_4465:HG2_PB_SVrefine2PB10Xhap12_6690:HG2_10X_SVrefine210Xhap12_6491:HG4_PB_SVrefine2PBcRDovetail_4526:HG3_PB_SVrefine2Falcon1Dovetail_5594:HG4_PB_HySA_13247:HG2_PB_HySA_16430:HG4_PB_pbsv_9188;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_MetaSV_4976:HG2_PB_SVrefine2PBcRplusDovetail_10816:HG3_Ill_MetaSV_5156;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0480769;ClusterMaxSizeDiff=0.0480769;ClusterMaxEditDist=0.195893;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=609;DistBack=-1;DistForward=138;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:5829283-5829282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:./.:9:23:2:12:./.:0:0:0:0:1/1:0:13:1/1:4:168:.:.:.
chr8	6008380	HG4_Ill_250bpfermikitraw_12265	G	GAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	20	PASS	ClusterIDs=HG4_PB_pbsv_9193:HG4_Ill_Krunchall_12898:HG4_Ill_GATKHC_14821:HG4_Ill_GATKHCSBGrefine_6327:HG4_Ill_250bpfermikitraw_12265:HG4_Ill_150bpfermikitraw_11762:HG2_Ill_Krunchall_12615:HG2_Ill_GATKHC_14752:HG2_Ill_GATKHCSBGrefine_6195:HG2_Ill_250bpfermikitraw_12301:HG2_Ill_150bpfermikitraw_11569;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11569:HG2_Ill_250bpfermikitraw_12301:HG2_Ill_GATKHCSBGrefine_6195:HG2_Ill_GATKHC_14752:HG2_Ill_Krunchall_12615:HG4_Ill_150bpfermikitraw_11762:HG4_Ill_250bpfermikitraw_12265:HG4_Ill_GATKHCSBGrefine_6327:HG4_Ill_GATKHC_14821:HG4_Ill_Krunchall_12898;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0530973;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.159292;PBcalls=1;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=151;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=8:6008351-6008389;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5276.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:./.:24:9:1:18:./.:0:0:0:0:0/1:19:27:./.:.:.:.:.:.
chr8	6044959	HG3_Ill_GATKHCSBGrefine_6131	C	CAATATGCAACACTTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_10819:HG2_PB_PB10Xdip_30113:HG4_PB_pbsv_9194:HG4_PB_HySA_13257:HG4_PB_assemblyticsfalcon_25512:HG2_PB_assemblyticsfalcon_26069:HG2_PB_HySA_16444:HG2_PB_SVrefine2PB10Xhap12_6694:HG3_PB_SVrefine2Falcon1Dovetail_5596:HG2_PB_SVrefine2Falcon2Bionano_4468:HG4_PB_SVrefine2PBcRDovetail_4529:HG4_PB_SVrefine2Falcon1Dovetail_5570:HG4_Ill_MetaSV_5218:HG4_Ill_GATKHCSBGrefine_6328:HG3_Ill_MetaSV_5157:HG3_Ill_GATKHCSBGrefine_6131:HG2_PB_SVrefine2Falcon1plusDovetail_11627:HG2_Ill_MetaSV_4977:HG2_Ill_GATKHCSBGrefine_6196;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6196:HG2_Ill_MetaSV_4977:HG2_PB_SVrefine2Falcon1plusDovetail_11627:HG3_Ill_GATKHCSBGrefine_6131:HG3_Ill_MetaSV_5157:HG4_Ill_GATKHCSBGrefine_6328:HG4_Ill_MetaSV_5218:HG4_PB_SVrefine2Falcon1Dovetail_5570;NumExactMatchSVs=8;ClusterMaxShiftDist=0.156986;ClusterMaxSizeDiff=0.156986;ClusterMaxEditDist=0.216641;PBcalls=13;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=318;DistBack=4847;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=8:6044960-6044977;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:40:1|0:0:37:28:0:./.:0:0:0:0:0/1:24:15:0/1:7:16:.:.:.
chr8	6054315	HG4_PB_SVrefine2Falcon1Dovetail_5571	C	CACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGGTAGACTGGATTAAGAAAATGTGGTACATATACACCGTGGAAT	20	PASS	ClusterIDs=HG4_PB_HySA_13258:HG2_PB_pbsv_9160:HG4_PB_pbsv_9195:HG3_PB_pbsv_8946:HG4_PB_assemblyticsfalcon_25513:HG2_PB_assemblyticsfalcon_26070:HG2_PB_HySA_16445:HG2_PB_PB10Xdip_30115:HG2_PB_PB10Xdip_30114:HG4_PB_SVrefine2PBcRDovetail_4530:HG4_PB_SVrefine2Falcon1Dovetail_5571:HG4_Ill_GATKHCSBGrefine_6329:HG3_PB_SVrefine2PBcRDovetail_4118:HG3_PB_SVrefine2Falcon1Dovetail_5597:HG3_Ill_GATKHCSBGrefine_6132:HG2_PB_SVrefine2PBcRplusDovetail_10820:HG2_PB_SVrefine2PB10Xhap12_6695:HG2_PB_SVrefine2Falcon2Bionano_4469:HG2_PB_SVrefine2Falcon1plusDovetail_11628:HG2_Ill_manta_2594:HG2_Ill_GATKHCSBGrefine_6197;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6197:HG2_Ill_manta_2594:HG2_PB_SVrefine2Falcon1plusDovetail_11628:HG2_PB_SVrefine2Falcon2Bionano_4469:HG2_PB_SVrefine2PB10Xhap12_6695:HG2_PB_SVrefine2PBcRplusDovetail_10820:HG3_Ill_GATKHCSBGrefine_6132:HG3_PB_SVrefine2Falcon1Dovetail_5597:HG3_PB_SVrefine2PBcRDovetail_4118:HG4_Ill_GATKHCSBGrefine_6329:HG4_PB_SVrefine2Falcon1Dovetail_5571:HG4_PB_SVrefine2PBcRDovetail_4530;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0744681;ClusterMaxSizeDiff=0.0631579;ClusterMaxEditDist=0.278351;PBcalls=17;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=92;DistBack=5910;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=8:6054316-6054320;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5278.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:18:0:24:./.:0:0:0:0:1/1:0:30:./.:.:.:.:.:.
chr8	8254001	HG2_PB_SVrefine2PBcRplusDovetail_10829	GAG	AGGAGGGGAGAGGAGGAGGGGAGAGGAGGGGAGAGGAGGGGAGAGGAGGGGAGAGGAGGAGGGGAGAGGAGGGGAGAGGAGGGGAGAGGAGGGGAGAGGAGGGGAGAGGAGTGGGAGGAGGAGGGGAGAGGAGGGGGAGGAGGAGGGGAGAGGAGGGGGAGGAGGAGGGGAGAAGAGGGGAGAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6715:HG2_PB_assemblyticsPBcR_25286:HG4_PB_SVrefine2Falcon1Dovetail_5578:HG4_PB_assemblyticsfalcon_25529:HG2_PB_SVrefine2Falcon1plusDovetail_11633:HG2_PB_SVrefine2PBcRplusDovetail_10829:HG2_PB_SVrefine2PB10Xhap12_6716:HG3_PB_HySA_13726:HG3_PB_SVrefine2Falcon1Dovetail_5606:HG2_PB_SVrefine2Falcon2Bionano_4476:HG3_PB_SVrefine2PBcRDovetail_4126;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6716:HG2_PB_SVrefine2PBcRplusDovetail_10829:HG2_PB_assemblyticsPBcR_25286;NumExactMatchSVs=3;ClusterMaxShiftDist=0.230366;ClusterMaxSizeDiff=0.230366;ClusterMaxEditDist=0.269542;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=181;DistBack=0;DistForward=22;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=83;REFWIDENED=8:8253918-8254000;PctSeqSimilarity=0.9316;PctSizeSimilarity=0.8619;PctRecOverlap=0.8673;SizeDiff=-29;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=88;MatchId=5279.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:34:1/1:0:18:0:17:./.:0:0:0:0:./.:1:6:./.:.:.:4167043:.:.
chr8	8638671	HG2_Ill_MetaSV_4986	C	CAAAGGTTCTCCACATCCCCACTAGATTGGCTAGATACAGAGTGTCACACAAAGGTTCTCCAAGTCCCCACCAGAGTAGCTAGATACAGTGTCGACTGGTGCATTCACAAACCCTGAGCTAGACACAGGGTGCTGATCGGTGTGTTTACAATCCCTGAGCTAGACAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6720:HG4_PB_assemblyticsfalcon_25532:HG3_PB_assemblyticsfalcon_25999:HG2_PB_assemblyticsPBcR_25290:HG2_PB_PB10Xdip_30581:HG3_PB_pbsv_8961:HG3_Ill_MetaSV_5165:HG3_Ill_GATKHC_14764:HG3_Ill_GATKHCSBGrefine_6147:HG2_PB_pbsv_9178:HG3_PB_HySA_13732:HG4_PB_SVrefine2Falcon1Dovetail_5580:HG3_PB_SVrefine2Falcon1Dovetail_5608:HG3_Ill_manta_2123:HG3_Ill_GATKHC_14763:HG3_Ill_GATKHCSBGrefine_6146:HG2_PB_SVrefine2PBcRplusDovetail_10832:HG2_Ill_MetaSV_4986:HG2_Ill_GATKHCSBGrefine_6212:HG2_PB_HySA_16482:HG4_Ill_MetaSV_5224:HG4_Ill_GATKHCSBGrefine_6344:HG4_PB_pbsv_9213:HG4_PB_HySA_13289:HG4_PB_SVrefine2PBcRDovetail_4540:HG4_Ill_SVrefine2DISCOVARDovetail_6521:HG3_Ill_SVrefine2DISCOVARDovetail_6711:HG2_PB_SVrefine2PBcRplusDovetail_10831:HG2_PB_SVrefine2Falcon1plusDovetail_11635:HG2_Ill_SVrefine2DISCOVARplusDovetail_12647;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6212:HG2_Ill_MetaSV_4986:HG2_PB_SVrefine2PBcRplusDovetail_10832:HG3_Ill_GATKHCSBGrefine_6146:HG3_Ill_GATKHC_14763:HG3_Ill_manta_2123:HG3_PB_SVrefine2Falcon1Dovetail_5608:HG4_PB_SVrefine2Falcon1Dovetail_5580;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0949555;ClusterMaxSizeDiff=0.0652819;ClusterMaxEditDist=0.236311;PBcalls=17;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=166;DistBack=3;DistForward=46;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=187;REFWIDENED=8:8638629-8638815;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:./.:16:8:9:26:./.:0:0:0:0:0/1:18:26:./.:.:.:4167043:.:.
chr8	8920114	HG2_Ill_GATKHCSBGrefine_6213	T	TAAGAAGGGGACGGGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6721:HG4_PB_pbsv_9214:HG2_PB_pbsv_9179:HG2_PB_HySA_16484:HG2_PB_PB10Xdip_30616:HG2_PB_SVrefine2Falcon2Bionano_4478:HG4_Ill_MetaSV_5225:HG4_Ill_GATKHCSBGrefine_6345:HG2_Ill_GATKHCSBGrefine_6213;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6213:HG4_Ill_GATKHCSBGrefine_6345:HG4_Ill_MetaSV_5225;NumExactMatchSVs=3;ClusterMaxShiftDist=0.220779;ClusterMaxSizeDiff=0.220779;ClusterMaxEditDist=0.253247;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=323;DistBack=65237;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:8920115-8920127;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5282.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:23:0|1:29:2:2:19:./.:0:0:0:0:0/1:21:16:0/1:7:29:4167043:.:.
chr8	9012954	HG2_PB_HySA_16486	T	TCCAGAAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGGAGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG2_PB_HySA_16486:HG2_PB_pbsv_9180:HG3_PB_assemblyticsfalcon_26002:HG4_PB_assemblyticsfalcon_25536:HG3_PB_HySA_13734:HG3_PB_SVrefine2Falcon1Dovetail_5609:HG2_PB_SVrefine2Falcon1plusDovetail_11636:HG2_PB_SVrefine2Falcon2Bionano_4479:HG4_PB_SVrefine2Falcon1Dovetail_5581;NumClusterSVs=9;ExactMatchIDs=HG2_PB_HySA_16486;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0937973;ClusterMaxSizeDiff=0.0937973;ClusterMaxEditDist=0.181543;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=336;DistBack=6;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=8:9012955-9012966;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5283.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:1|0:2:19:23:0:./.:0:0:0:0:0/1:34:10:0/1:10:30:4167043:.:.
chr8	9463649	HG2_10X_SVrefine210Xhap12_6513	T	TAAGAGTTATTTTTTTTTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCATTGCAAGCTCCGTCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6513:HG3_PB_assemblyticsfalcon_26006:HG3_PB_SVrefine2Falcon1Dovetail_5611:HG4_Ill_MetaSV_5226:HG4_Ill_GATKHCSBGrefine_6349:HG4_PB_HySA_13294:HG4_PB_pbsv_9220:HG2_PB_pbsv_9185:HG4_Ill_SVrefine2DISCOVARDovetail_6528;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6513:HG4_Ill_SVrefine2DISCOVARDovetail_6528;NumExactMatchSVs=2;ClusterMaxShiftDist=0.211244;ClusterMaxSizeDiff=0.201022;ClusterMaxEditDist=0.272572;PBcalls=5;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=313;DistBack=-6;DistForward=-1;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=8:9463650-9463681;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9937;PctRecOverlap=0.9619;SizeDiff=-2;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=98;MatchId=5284.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:46:31:0|1:44:0:0:26:./.:0:0:0:0:0/1:25:10:./.:3:26:4167043:.:.
chr8	9665674	HG2_PB_pbsv_9187	A	AGGGCCGGGGCGCGGTGGCTCCACGCCTGTAAATCCCAGCACTTTGGGAGGCCGAGGCCGGAGTGGATCATGAGGTCAGGAGATCGGACCATCCTGGCTAACAAGGTGAACCCGTCTCTAAACTAAAATACAAAAAATTAAGCCCGGCGTGGTGGCGGGTCGCCTGTAGTCCCAGCTACTCGGGAGGATGAGGCAAGGAGAATGGCGGAACACGGGAAGCGGAGCTTGCAGTGAGCCGAGATTTGCGCCACTGCAGTCCGCAGTCGCGGCCTGGGCCGACAGAGCTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAATCTTCACTGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5613:HG2_PB_pbsv_9187:HG4_PB_pbsv_9222:HG2_PB_PB10Xdip_30646:HG2_PB_PB10Xdip_30647:HG3_PB_pbsv_8966:HG3_PB_HySA_13748:HG4_PB_assemblyticsfalcon_25545:HG4_PB_HySA_13297:HG2_PB_HySA_16497:HG2_PB_SVrefine2PB10Xhap12_6729:HG4_PB_SVrefine2PBcRDovetail_4542:HG2_PB_SVrefine2Falcon1plusDovetail_11639:HG2_PB_SVrefine2PBcRplusDovetail_10836:HG4_PB_SVrefine2Falcon1Dovetail_5584:HG2_PB_SVrefine2Falcon2Bionano_4482:HG3_PB_SVrefine2PBcRDovetail_4131;NumClusterSVs=17;ExactMatchIDs=HG2_PB_pbsv_9187;NumExactMatchSVs=1;ClusterMaxShiftDist=0.157504;ClusterMaxSizeDiff=0.157504;ClusterMaxEditDist=0.203957;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=347;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:9665675-9665674;PctSeqSimilarity=0.9613;PctSizeSimilarity=0.9741;PctRecOverlap=0.9366;SizeDiff=9;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=95;MatchId=5285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:35:1|0:0:31:14:2:./.:0:0:0:0:0/1:18:9:0/1:7:18:4167043:.:.
chr8	9749961	HG2_Ill_manta_2604	A	AAATATATATAATATATATATTATATATTATATATATATAAATATATATAATATATATATTATATATTTTATATATAATATATATATTATATATTATATATAATATATAATATATATAATATATATATTATATAATATATATAATATAATATATATATTATATATAAAATATATAATATATATAAAATATATATATAATATATATAATATATAATATGTTTTATAATATATTATATAT	20	PASS	ClusterIDs=HG3_PB_pbsv_8969:HG2_PB_SVrefine2PBcRplusDovetail_10839:HG3_Ill_GATKHCSBGrefine_6151:HG4_Ill_MetaSV_5227:HG4_Ill_GATKHCSBGrefine_6353:HG2_Ill_manta_2604:HG2_Ill_GATKHCSBGrefine_6220:HG4_PB_SVrefine2Falcon1Dovetail_5588:HG4_Ill_SVrefine2DISCOVARDovetail_6531:HG2_Ill_SVrefine2DISCOVARplusDovetail_12654:HG2_PB_SVrefine2PB10Xhap12_6732:HG2_PB_SVrefine2Falcon1plusDovetail_11642:HG4_PB_SVrefine2PBcRDovetail_4545:HG3_PB_SVrefine2Falcon1Dovetail_5616:HG3_Ill_SVrefine2DISCOVARDovetail_6718:HG2_PB_SVrefine2Falcon2Bionano_4484:HG3_PB_SVrefine2PBcRDovetail_4134:HG4_PB_pbsv_9225:HG2_PB_PB10Xdip_30649:HG2_PB_PB10Xdip_30648;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6220:HG2_Ill_manta_2604:HG4_Ill_GATKHCSBGrefine_6353:HG4_Ill_MetaSV_5227;NumExactMatchSVs=4;ClusterMaxShiftDist=0.315369;ClusterMaxSizeDiff=0.315369;ClusterMaxEditDist=0.315369;PBcalls=12;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=237;DistBack=-1;DistForward=42970;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=86;REFWIDENED=8:9749948-9750033;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5286.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:1/1:1:47:0:6:./.:0:0:0:0:1/1:1:25:./.:.:.:4167043:.:.
chr8	9807890	HG2_PB_SVrefine2Falcon2Bionano_4485	T	TAAAAGAGTCTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAATATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30651:HG4_PB_pbsv_9226:HG2_PB_pbsv_9191:HG3_PB_assemblyticsfalcon_26014:HG4_PB_assemblyticsfalcon_25550:HG3_PB_pbsv_8970:HG2_PB_HySA_16500:HG2_Ill_breakscan11_3935:HG2_PB_SVrefine2Falcon1plusDovetail_11643:HG4_PB_SVrefine2PBcRDovetail_4546:HG2_PB_SVrefine2Falcon2Bionano_4485:HG2_PB_SVrefine2PB10Xhap12_6733:HG2_PB_SVrefine2PBcRplusDovetail_10840:HG3_Ill_MetaSV_5167:HG3_PB_SVrefine2PBcRDovetail_4135:HG3_Ill_GATKHCSBGrefine_6152:HG2_10X_SVrefine210Xhap12_6516:HG4_PB_SVrefine2Falcon1Dovetail_5589:HG3_PB_SVrefine2Falcon1Dovetail_5617:HG4_PB_HySA_13299:HG3_PB_HySA_13752:HG2_PB_PB10Xdip_30650;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4485:HG4_PB_SVrefine2PBcRDovetail_4546;NumExactMatchSVs=2;ClusterMaxShiftDist=0.112121;ClusterMaxSizeDiff=0.112121;ClusterMaxEditDist=0.223201;PBcalls=18;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=333;DistBack=14957;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=8:9807891-9807901;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5288.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:74:1/1:0:37:1:33:./.:0:0:0:0:1/1:0:23:1/1:3:60:4167043:.:.
chr8	10007381	HG2_PB_SVrefine2PBcRplusDovetail_10841	C	CCATCAGTAGTGCCACGGTGGGTACCATCACATCCTAGAAATGTGGCTCCTGGCAGATCATTCGGCCTCAGTTTCTACATCTCTAAAATGGAACGACAACACCCGTCCTCTTACCTTTGCCGGGACTGTTGTGAGGCCCAAATGAGATTATGTTCGTGCAGCTTGTGTCACTTAAGGTTGCTAACATGCCCTTCTATCAACTGAGCTTCCCCACCCCCAAAAATTTGGATTTCCATATATGCAAGACAATAAGCTATTTTACATTTCTCTAGAAGTTTAGCAAATACTAAAAAATACTTTTTAGAATAAGATGAAACAAACCATATTTTAGTTTTGTCTTCTTGCTTTTCAGATGATACTGTTGATCTCTAAGCCTGACTACCTTTTCATATAAATTAACCCCTCGGTTTTCTGCAGCTCCCTCTGTATCTTCCCAGTTGTGTTCCCTTGCCCCAGTCTTTAGGTTTATTAATCTAGGAATTGACTCATGTGGGCTCATCTGTTTTACTTTGATCTTGTGAGGTGAGTCCCAGTTTTGGGTGTCCTGGCAAGCCAGTGCCAGTGTTGTGTGCTTTATTCTGGGGGCTGGGTGCTGGGGAGGGGGCAGCCCACCCTTTCCTCTGCTCTGGAGAGGCTGAGAGAGGAAGATGGGATAGCACCAGGTAACAGAGTCATTTCTTTCTTCTGGTGGTGCGGCTGCCTTTGAATTCCTACCCTGTCGCCAGAGGGGGGAAGAGGAGGAAGAGAGAAGGTTATGGCAGGGGCATCCGAGGCACAGGAATAACCTCTTCAGCACCCACGAGTAGGGGGCCCCAGGCTGCTGTCTGCTCTTGCCCTATCCCTGTCTGGGATGTTCTGTGTATTTCTGGGACCGGCTGGTTGATGGTGACAGGGTCCCAGGCCACAAGGGAAGCCTCAGTCTGTAACACAGCAACTTTGTTGATGACAAAGAGGCAGAGCTTTTAAAATGGAGCCCATAATGTTCATGCTATTTCTTGTAAGAATTTTTGTTGTTGTTA	20	PASS	ClusterIDs=HG2_Ill_Spiral_639:HG4_PB_pbsv_9227:HG2_PB_pbsv_9192:HG4_PB_HySA_13301:HG2_PB_SVrefine2Falcon2Bionano_4486:HG3_PB_SVrefine2PBcRDovetail_4136:HG2_PB_SVrefine2PB10Xhap12_6734:HG2_10X_SVrefine210Xhap12_6517:HG4_PB_SVrefine2Falcon1Dovetail_5590:HG4_PB_SVrefine2PBcRDovetail_4547:HG3_Ill_SVrefine2DISCOVARDovetail_6719:HG2_PB_SVrefine2PBcRplusDovetail_10841:HG2_Ill_SVrefine2DISCOVARplusDovetail_12656:HG2_Ill_MetaSV_4988:HG2_Ill_GATKHCSBGrefine_6221:HG4_PB_assemblyticsfalcon_25552:HG4_Ill_MetaSV_5228:HG4_Ill_SVrefine2DISCOVARDovetail_6532:HG2_PB_SVrefine2Falcon1plusDovetail_11644:HG3_PB_assemblyticsfalcon_26016:HG3_PB_SVrefine2Falcon1Dovetail_5618:HG2_PB_PB10Xdip_30675:HG2_PB_PB10Xdip_30674:HG3_PB_pbsv_8971:HG4_Ill_Spiral_751:HG3_Ill_Spiral_9645;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6221:HG2_Ill_MetaSV_4988:HG2_Ill_SVrefine2DISCOVARplusDovetail_12656:HG2_PB_SVrefine2PBcRplusDovetail_10841:HG3_Ill_SVrefine2DISCOVARDovetail_6719;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0414059;ClusterMaxSizeDiff=0.03948;ClusterMaxEditDist=0.187112;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=1018;DistBack=36578;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:10007382-10007381;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5289.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:20:0:17:./.:0:0:0:0:1/1:0:33:0/1:20:100:4167043:.:.
chr8	11098994	HG3_Ill_250bpfermikitraw_12012	C	CCCTTATCAGTAGTTCTGCTTTTGCCCTTTGCCTTGTGATCTTTGTTGGAG	20	PASS	ClusterIDs=HG3_Ill_Spiral_9650:HG3_PB_pbsv_8982:HG4_PB_pbsv_9237:HG2_PB_pbsv_9206:HG4_PB_HySA_13318:HG2_PB_HySA_16519:HG4_Ill_GATKHC_14880:HG3_Ill_GATKHC_14783:HG2_Ill_GATKHC_14809:HG4_Ill_svaba_11625:HG4_Ill_Krunchall_12948:HG4_Ill_250bpfermikitraw_12313:HG3_Ill_svaba_11612:HG3_Ill_Krunchall_12351:HG3_Ill_250bpfermikitraw_12012:HG2_Ill_svaba_11509:HG2_Ill_Krunchall_12668:HG2_Ill_250bpfermikitraw_12350:HG3_PB_HySA_13766;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12350:HG2_Ill_Krunchall_12668:HG2_Ill_svaba_11509:HG3_Ill_250bpfermikitraw_12012:HG3_Ill_Krunchall_12351:HG3_Ill_svaba_11612:HG4_Ill_250bpfermikitraw_12313:HG4_Ill_Krunchall_12948:HG4_Ill_svaba_11625;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0970874;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.203704;PBcalls=6;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=22542;DistForward=9657;DistMin=9657;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=8:11098993-11098996;PctSeqSimilarity=0.981;PctSizeSimilarity=0.98;PctRecOverlap=0.9412;SizeDiff=1;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=96;MatchId=5290.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:0|1:19:4:0:28:./.:0:0:0:0:0/1:24:19:./.:.:.:4167043:.:.
chr8	11313936	HG2_PB_pbsv_9208	T	TTGAGTGTGAGTGATGGGGGGTGTTGCGTTGCTGTGTGTGAAGTGTGGAATCGTGGGGGGTGGTTTGCCTGGCTGTGTTGTGAGTGTGAGTGTGGGGGGGTAGTTGGCCTTGCTGTGTGTGAGTGTGAGTGTGGGGGGTAGTTTGCCTTGCTGGGGTTTGTGTGAATGAGGGGTGTTGGCTTGCTGTGCATGAGTGTGAGTGTTGAGTGTCAGGGGTGGTTGCCCTGGCTGGGGGTATGTGAGTGTTGGGTGGCTTGCCTTGCTGTGAGTGTGGGGGGTGGTTTGCCTTTGCTGCTGGTGTGTGAGTGTAAGGGGTTGGGTTGCCTTGTGGGTATCAGTGTGAGTGTGAGGTTGGTTGCCCTGCTGGGTGTGGTATGGGTGTGAGTGTGGGGGTGGTTAGCCCTGCTGGTGTGTGTGTGGGGTGGTTGCGCCTGCCTGGTGTGGTGAAGTGTGAGTGTGAGTGTGGGGGGTGGTTGCCTTGCTGGGTTG	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_29284:HG3_PB_SVrefine2Falcon1Dovetail_5624:HG2_PB_pbsv_9208:HG3_PB_pbsv_8984:HG4_PB_SVrefine2Falcon1Dovetail_5597:HG2_PB_SVrefine2Falcon1plusDovetail_11651:HG4_PB_SVrefine2PBcRDovetail_4552:HG2_PB_HySA_16522:HG2_PB_PB10Xdip_29283;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_9208;NumExactMatchSVs=1;ClusterMaxShiftDist=0.163583;ClusterMaxSizeDiff=0.162814;ClusterMaxEditDist=0.262488;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=488;DistBack=180;DistForward=538;DistMin=180;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=353;REFWIDENED=8:11313732-11314084;PctSeqSimilarity=0.9367;PctSizeSimilarity=0.9939;PctRecOverlap=0.5804;SizeDiff=-3;StartDistance=205;EndDistance=205;GTMatch=1;TruScore=83;MatchId=5291.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:34:1/1:0:16:0:17:./.:0:0:0:0:./.:5:0:0/1:10:25:4167043:665:.
chr8	12916705	HG3_Ill_SVrefine2DISCOVARDovetail_6735	AA	GAAGAAAACTTAGCTGGGTACAATGGTACACGTCTGTAGTCCCAGTTATTCGGGAGGCTGAGGCAGGAGGCTTGCTCGAGCCTGGAGGTTGAGGCTGCAGTAAGCCCTGATATTGCACCACTACATTGCAGCCTGGCCCACAGGGCAAGACTCTGTCT	20	PASS	ClusterIDs=HG4_Ill_MetaSV_5235:HG4_PB_pbsv_9246:HG3_PB_pbsv_8993:HG4_PB_HySA_13340:HG4_Ill_GATKHCSBGrefine_6364:HG3_Ill_GATKHCSBGrefine_6161:HG2_PB_PB10Xdip_29356:HG2_PB_PB10Xdip_29355:HG2_Ill_GATKHCSBGrefine_6243:HG2_PB_HySA_16541:HG3_PB_assemblyticsfalcon_26039:HG3_PB_SVrefine2PBcRDovetail_4150:HG3_PB_SVrefine2Falcon1Dovetail_5628:HG4_Ill_SVrefine2DISCOVARDovetail_6543:HG3_Ill_manta_2127:HG3_Ill_Spiral_9663:HG3_Ill_SVrefine2DISCOVARDovetail_6735:HG2_PB_assemblyticsPBcR_25338:HG2_PB_SVrefine2PBcRplusDovetail_10855:HG2_PB_SVrefine2PB10Xhap12_6751:HG2_PB_SVrefine2Falcon2Bionano_4495:HG2_PB_SVrefine2Falcon1plusDovetail_11657:HG2_Ill_manta_2608:HG2_Ill_SVrefine2DISCOVARplusDovetail_12667:HG2_10X_SVrefine210Xhap12_6534:HG2_PB_pbsv_9213:HG3_PB_HySA_13796;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6534:HG2_Ill_SVrefine2DISCOVARplusDovetail_12667:HG2_Ill_manta_2608:HG2_PB_SVrefine2Falcon1plusDovetail_11657:HG2_PB_SVrefine2Falcon2Bionano_4495:HG2_PB_SVrefine2PB10Xhap12_6751:HG2_PB_SVrefine2PBcRplusDovetail_10855:HG2_PB_assemblyticsPBcR_25338:HG3_Ill_SVrefine2DISCOVARDovetail_6735:HG3_Ill_Spiral_9663:HG3_Ill_manta_2127:HG4_Ill_SVrefine2DISCOVARDovetail_6543;NumExactMatchSVs=12;ClusterMaxShiftDist=0.05;ClusterMaxSizeDiff=0.05;ClusterMaxEditDist=0.272446;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=156;DistBack=-2;DistForward=18925;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=132;REFWIDENED=8:12916573-12916704;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9936;PctRecOverlap=0.981;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:55:1/1:4:30:4:30:./.:0:0:0:0:1/1:0:12:./.:.:.:.:.:.
chr8	13337344	HG3_Ill_GATKHC_14814	G	GAGAAAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGGAAAAGAAAGAAAGAA	20	PASS	ClusterIDs=HG4_Ill_FB_8018:HG2_PB_HySA_16549:HG3_Ill_svaba_11635:HG3_Ill_GATKHC_14814:HG3_Ill_GATKHCSBGrefine_6166:HG3_Ill_FB_7985:HG3_Ill_250bpfermikitraw_12043:HG3_Ill_150bpfermikitraw_11695:HG2_Ill_svaba_11534:HG2_Ill_Krunchall_12699:HG2_Ill_GATKHC_14848:HG2_Ill_FB_8044:HG2_Ill_250bpfermikitraw_12387:HG2_Ill_150bpfermikitraw_11637:HG3_PB_HySA_13809:HG4_Ill_GATKHC_14906:HG2_Ill_GATKHC_14847:HG2_Ill_FB_8043:HG4_Ill_svaba_11639:HG4_Ill_Krunchall_12969:HG4_Ill_250bpfermikitraw_12335:HG4_Ill_150bpfermikitraw_11824:HG2_Ill_svaba_11533:HG2_Ill_Krunchall_12698:HG2_Ill_250bpfermikitraw_12386:HG2_Ill_150bpfermikitraw_11636:HG3_Ill_svaba_11634:HG3_Ill_Spiral_9670:HG3_Ill_Krunchall_12381:HG3_Ill_GATKHC_14813:HG3_Ill_GATKHCSBGrefine_6165:HG3_Ill_FB_7984;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11637:HG2_Ill_250bpfermikitraw_12387:HG2_Ill_FB_8044:HG2_Ill_GATKHC_14848:HG2_Ill_Krunchall_12699:HG2_Ill_svaba_11534:HG3_Ill_150bpfermikitraw_11695:HG3_Ill_250bpfermikitraw_12043:HG3_Ill_FB_7985:HG3_Ill_GATKHCSBGrefine_6166:HG3_Ill_GATKHC_14814:HG3_Ill_svaba_11635;NumExactMatchSVs=12;ClusterMaxShiftDist=0.193548;ClusterMaxSizeDiff=0.189474;ClusterMaxEditDist=0.27957;PBcalls=2;Illcalls=30;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=13;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=-1;DistForward=26758;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=8:13337343-13337346;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5293.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:39:1/1:3:15:2:18:./.:0:0:0:0:1/1:1:43:./.:.:.:.:.:.
chr8	13561274	HG2_Ill_SVrefine2DISCOVARplusDovetail_12671	T	TCTCAAGGTTTATTTTTTTTTTATTTATTTATTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCACCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_16554:HG2_PB_pbsv_9221:HG4_PB_assemblyticsfalcon_25587:HG3_PB_assemblyticsfalcon_26054:HG3_PB_HySA_13816:HG4_PB_HySA_13350:HG4_PB_pbsv_9253:HG2_Ill_breakscan11_3937:HG3_PB_pbsv_8996:HG4_Ill_manta_2237:HG3_Ill_manta_2132:HG4_PB_SVrefine2Falcon1Dovetail_5600:HG3_PB_SVrefine2Falcon1Dovetail_5633:HG2_Ill_SVrefine2DISCOVARplusDovetail_12671;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12671:HG3_PB_SVrefine2Falcon1Dovetail_5633:HG4_PB_SVrefine2Falcon1Dovetail_5600;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0890937;ClusterMaxSizeDiff=0.0890937;ClusterMaxEditDist=0.208909;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=326;DistBack=1720;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:13561275-13561289;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5294.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:41:0|1:41:0:0:39:./.:0:0:0:0:0/1:17:7:0/1:6:23:.:.:.
chr8	13656193	HG2_Ill_250bpfermikitraw_12394	A	ATCACTTGAATCCAGGAGGCGGAGGTGGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGACCCAGAC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12394:HG3_PB_pbsv_8998:HG2_PB_PB10Xdip_29414:HG3_PB_assemblyticsfalcon_26057:HG3_Ill_GATKHC_14819:HG3_Ill_GATKHCSBGrefine_6170:HG2_Ill_GATKHCSBGrefine_6249:HG2_PB_HySA_16557:HG3_Ill_Krunchall_12388:HG3_Ill_250bpfermikitraw_12046:HG3_Ill_150bpfermikitraw_11701:HG2_Ill_Krunchall_12708;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12394:HG3_Ill_Krunchall_12388:HG3_Ill_250bpfermikitraw_12046:HG3_Ill_150bpfermikitraw_11701:HG2_Ill_Krunchall_12708;NumExactMatchSVs=5;ClusterMaxShiftDist=0.13245;ClusterMaxSizeDiff=0.131579;ClusterMaxEditDist=0.211921;PBcalls=4;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=79;DistBack=65;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=85;REFWIDENED=8:13656190-13656274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5295.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:0|1:27:0:3:35:./.:0:0:0:0:0/1:19:17:./.:.:.:.:.:.
chr8	13958885	HG3_PB_SVrefine2Falcon1Dovetail_5637	G	AGAAAATTGGGGAGAGGTTATCTGAGGTTATCTGAAGAAATAATGGGAATTTCCAGAATTGGTAAAAATGTGATTCTGCAGATAACAATAATCATGTATACTTATCACTTTATAGTGGAAAAATAGAACATCAATGACAAAGTATTATTTAAAGCAGACAGCAGGAGAAAAAATAAATGATGTCTGCA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5001:HG4_PB_pbsv_9258:HG2_PB_PB10Xdip_29415:HG2_PB_pbsv_9226:HG3_PB_pbsv_9002:HG2_PB_HySA_16568:HG2_10X_SVrefine210Xhap12_6541:HG3_PB_HySA_13826:HG4_PB_HySA_13362:HG2_PB_SVrefine2Falcon1plusDovetail_11663:HG4_PB_SVrefine2Falcon1Dovetail_5605:HG4_Ill_SVrefine2DISCOVARDovetail_6557:HG3_PB_SVrefine2PBcRDovetail_4156:HG3_PB_SVrefine2Falcon1Dovetail_5637:HG3_Ill_SVrefine2DISCOVARDovetail_6744:HG2_PB_SVrefine2PBcRplusDovetail_10860:HG2_PB_SVrefine2PB10Xhap12_6759:HG2_PB_SVrefine2Falcon2Bionano_4501:HG2_Ill_SVrefine2DISCOVARplusDovetail_12680:HG4_PB_SVrefine2PBcRDovetail_4561;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12680:HG2_PB_SVrefine2Falcon2Bionano_4501:HG2_PB_SVrefine2PB10Xhap12_6759:HG2_PB_SVrefine2PBcRplusDovetail_10860:HG3_Ill_SVrefine2DISCOVARDovetail_6744:HG3_PB_SVrefine2Falcon1Dovetail_5637:HG3_PB_SVrefine2PBcRDovetail_4156:HG4_Ill_SVrefine2DISCOVARDovetail_6557:HG4_PB_SVrefine2Falcon1Dovetail_5605;NumExactMatchSVs=9;ClusterMaxShiftDist=0.121053;ClusterMaxSizeDiff=0.115789;ClusterMaxEditDist=0.230179;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=187;DistBack=-187;DistForward=16543;DistMin=-187;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=188;REFWIDENED=8:13958886-13959073;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9947;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:70:1/1:1:38:0:30:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr8	14371029	HG4_Ill_SVrefine2DISCOVARDovetail_6560	A	TATGTTTAATAATATACATTATATATTATTTAATATAATTTATATTAAATATATTTATATATAAATTTATATATAAAATAAATAAAATATATTAAATATAATTATTTAATATACATTATATATTATTTAATGTATATATATTTAATGTATATGT	20	PASS	ClusterIDs=HG2_Ill_svaba_11554:HG2_PB_pbsv_9227:HG4_PB_SVrefine2PBcRDovetail_4562:HG4_Ill_manta_2240:HG4_Ill_SVrefine2DISCOVARDovetail_6560:HG2_PB_SVrefine2Falcon1plusDovetail_11664:HG2_Ill_manta_2616:HG2_Ill_SpiralSDKrefine_16722:HG2_Ill_SVrefine2DISCOVARplusDovetail_12681:HG2_10X_SVrefine210Xhap12_6543:HG4_Ill_GATKHCSBGrefine_6376:HG2_Ill_GATKHCSBGrefine_6255:HG4_PB_HySA_13366:HG2_PB_HySA_16570:HG4_PB_pbsv_9261:HG4_Ill_MetaSV_5239:HG2_Ill_MetaSV_5002:HG4_Ill_svaba_11660;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6543:HG2_Ill_SVrefine2DISCOVARplusDovetail_12681:HG2_Ill_SpiralSDKrefine_16722:HG2_Ill_manta_2616:HG2_PB_SVrefine2Falcon1plusDovetail_11664:HG4_Ill_SVrefine2DISCOVARDovetail_6560:HG4_Ill_manta_2240;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0709677;ClusterMaxSizeDiff=0.019544;ClusterMaxEditDist=0.225806;PBcalls=6;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=153;DistBack=-1;DistForward=37968;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:14371030-14371028;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9935;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5297.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:38:./.:28:7:12:26:./.:0:0:0:0:0/1:27:18:./.:.:.:.:.:.
chr8	15289365	HG2_PB_PB10Xdip_29756	CA	TGTGCTAAAAGGAAAAATTGTGATTTGGAATTGGAAATTACACAATTTGTTTAAAAGATAAAATTATCCAAGAATGTGCTAAACCCAGATAAATTTACAAATGTTTTTATCATTGGCAAAGCTAGCTTAATGTTTTCTCTGATTATTTATCATCATGTCTATGTAAATGCAAGAACGATTCAGAAGCTATTAATG	20	PASS	ClusterIDs=HG4_PB_pbsv_9268:HG4_PB_HySA_13374:HG3_PB_assemblyticsfalcon_26075:HG3_PB_SVrefine2PBcRDovetail_4160:HG3_PB_SVrefine2Falcon1Dovetail_5643:HG3_Ill_SVrefine2DISCOVARDovetail_6750:HG2_PB_assemblyticsPBcR_25366:HG2_PB_SVrefine2PBcRplusDovetail_10864:HG2_PB_SVrefine2PB10Xhap12_6765:HG2_PB_SVrefine2Falcon2Bionano_4507:HG2_PB_SVrefine2Falcon1plusDovetail_11670:HG2_PB_PB10Xdip_29756:HG2_PB_PB10Xdip_29755:HG2_Ill_SVrefine2DISCOVARplusDovetail_12688:HG2_10X_SVrefine210Xhap12_6550:HG4_Ill_MetaSV_5242:HG3_Ill_MetaSV_5180:HG2_Ill_MetaSV_5006:HG3_PB_pbsv_9005:HG2_PB_pbsv_9234;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6550:HG2_Ill_SVrefine2DISCOVARplusDovetail_12688:HG2_PB_PB10Xdip_29755:HG2_PB_PB10Xdip_29756:HG2_PB_SVrefine2Falcon1plusDovetail_11670:HG2_PB_SVrefine2Falcon2Bionano_4507:HG2_PB_SVrefine2PB10Xhap12_6765:HG2_PB_SVrefine2PBcRplusDovetail_10864:HG2_PB_assemblyticsPBcR_25366:HG3_Ill_SVrefine2DISCOVARDovetail_6750:HG3_PB_SVrefine2Falcon1Dovetail_5643:HG3_PB_SVrefine2PBcRDovetail_4160:HG3_PB_assemblyticsfalcon_26075;NumExactMatchSVs=13;ClusterMaxShiftDist=0.050505;ClusterMaxSizeDiff=0.0353535;ClusterMaxEditDist=0.278607;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=193;DistBack=0;DistForward=16255;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:15289367-15289364;PctSeqSimilarity=0.9949;PctSizeSimilarity=0.9897;PctRecOverlap=0.9897;SizeDiff=-2;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=5298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:23:0:26:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr8	16047248	HG3_PB_SVrefine2Falcon1Dovetail_5649	ATAAAATCTTAT	TTTATATATATATAAAATCTTACTTTATATTTTATATATATGAAATCTTACTTTATATATATTTTATATATATATAAAATCTTACTTTATATATATTTTATATATATAAAATCTTATTTTATATATATAAAACTTATTTTTATATTTTATATATATAAACTTATTTTATATATATTTATATATATATAAAATCTTATTTTATATATATTTTTATATATATATAAATCTTATTTTATATATATTTTTATATATATAAAATAAGATTTTATATATATTTATATATATATAAAATAAGATTTTATATATATTTTATATATATATAAAATAAGATTTTATATATATTTTATATATATATAAAATAAGATTTTATATATATTTTATATATATATATATAAAATTTTATATATATATATAATATTTTATTATATATATAATAAAATAATTTAATATTATATAAAATAAGATTTATATATATAAATAAGATTTTATATATATATAGATTTTATATATATAAAATAAGATTTTATATATATATAAAATAAGATTTTATATATATATAAAATATATATAAAATCTTATTTTATATATATTTTATATATATATAAAATCTTATTTTATATATATATAAAATCTTATTTTATATATATTTTATATATATATAAAATCTTATTTTATATATATTTTATTATATAATAATCTTATTTATATATATTTTATATATATATATAAAATCTTATTTATATATATATTTATATATATAAAATCTTATTTTATATATA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5613:HG2_PB_SVrefine2Falcon1plusDovetail_11672:HG3_PB_assemblyticsfalcon_26087:HG2_PB_pbsv_9238:HG3_PB_SVrefine2Falcon1Dovetail_5649:HG3_PB_SVrefine2Falcon1Dovetail_5648:HG3_PB_assemblyticsfalcon_26086:HG3_PB_pbsv_9009:HG2_PB_PB10Xdip_29767:HG2_PB_PB10Xdip_29766:HG3_PB_SVrefine2Falcon1Dovetail_5647:HG3_PB_assemblyticsfalcon_26085:HG4_PB_SVrefine2PBcRDovetail_4571:HG4_PB_pbsv_9273:HG2_PB_SVrefine2Falcon2Bionano_4508:HG3_PB_SVrefine2PBcRDovetail_4163:HG2_PB_SVrefine2PBcRplusDovetail_10866:HG2_PB_SVrefine2PB10Xhap12_6768;NumClusterSVs=18;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5649:HG3_PB_assemblyticsfalcon_26087;NumExactMatchSVs=2;ClusterMaxShiftDist=0.215264;ClusterMaxSizeDiff=0.215264;ClusterMaxEditDist=0.332681;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=767;DistBack=11;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=198;REFWIDENED=8:16047098-16047295;PctSeqSimilarity=0.9627;PctSizeSimilarity=0.987;PctRecOverlap=0.7853;SizeDiff=10;StartDistance=151;EndDistance=162;GTMatch=1;TruScore=91;MatchId=5299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:155:1/1:3:35:1:17:./.:0:0:0:0:0/0:22:0:0/1:11:35:.:.:.
chr8	16102806	HG4_PB_SVrefine2Falcon1Dovetail_5614	A	ACATATTATGGATTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG	20	PASS	ClusterIDs=HG2_PB_HySA_16594:HG2_PB_pbsv_9239:HG2_PB_HySA_16595:HG3_PB_pbsv_9011:HG3_PB_HySA_13849:HG3_PB_assemblyticsfalcon_26088:HG4_PB_assemblyticsfalcon_25615:HG2_PB_assemblyticsPBcR_25373:HG2_PB_SVrefine2Falcon1plusDovetail_11673:HG4_PB_pbsv_9274:HG4_PB_HySA_13389:HG3_PB_SVrefine2Falcon1Dovetail_5650:HG4_PB_SVrefine2PBcRDovetail_4572:HG4_PB_SVrefine2Falcon1Dovetail_5614:HG4_Ill_GATKHCSBGrefine_6383:HG3_Ill_MetaSV_5181:HG3_Ill_GATKHCSBGrefine_6178:HG2_PB_SVrefine2PBcRplusDovetail_10867:HG2_PB_SVrefine2PB10Xhap12_6769:HG2_PB_SVrefine2Falcon2Bionano_4509:HG2_Ill_MetaSV_5008:HG2_Ill_GATKHCSBGrefine_6261:HG2_10X_SVrefine210Xhap12_6554:HG4_Ill_manta_2243:HG2_PB_PB10Xdip_29769:HG2_PB_PB10Xdip_29768;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6554:HG2_Ill_GATKHCSBGrefine_6261:HG2_Ill_MetaSV_5008:HG2_PB_SVrefine2Falcon2Bionano_4509:HG2_PB_SVrefine2PB10Xhap12_6769:HG2_PB_SVrefine2PBcRplusDovetail_10867:HG3_Ill_GATKHCSBGrefine_6178:HG3_Ill_MetaSV_5181:HG4_Ill_GATKHCSBGrefine_6383:HG4_PB_SVrefine2Falcon1Dovetail_5614:HG4_PB_SVrefine2PBcRDovetail_4572;NumExactMatchSVs=11;ClusterMaxShiftDist=0.162455;ClusterMaxSizeDiff=0.162455;ClusterMaxEditDist=0.270548;PBcalls=19;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=276;DistBack=26683;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:16102807-16102822;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:./.:3:0:0:5:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr8	16531565	HG2_PB_SVrefine2Falcon1plusDovetail_11674	T	TGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGAGGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAAATCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTATCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAACGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAACGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5651:HG4_PB_pbsv_9276:HG2_PB_pbsv_9241:HG2_PB_assemblyticsPBcR_25378:HG4_PB_assemblyticsfalcon_25618:HG3_PB_assemblyticsfalcon_26089:HG3_PB_pbsv_9013:HG3_PB_SVrefine2PBcRDovetail_4164:HG2_PB_SVrefine2PBcRplusDovetail_10868:HG2_PB_SVrefine2Falcon1plusDovetail_11674:HG2_PB_SVrefine2PB10Xhap12_6770:HG2_PB_SVrefine2Falcon2Bionano_4510:HG4_PB_SVrefine2Falcon1Dovetail_5615;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11674:HG2_PB_SVrefine2PBcRplusDovetail_10868;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0615206;ClusterMaxSizeDiff=0.0615206;ClusterMaxEditDist=0.166761;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=849;DistBack=91107;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=8:16531566-16531575;PctSeqSimilarity=0.9988;PctSizeSimilarity=1;PctRecOverlap=0.9929;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=5301.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:62:1/1:0:25:0:20:./.:0:0:0:0:1/1:0:16:./.:12:200:.:.:.
chr8	17653781	HG3_Ill_MetaSV_5186	T	TGGGCCTGCTAGCAAGACTTAAGTGCAGTTCATTTTTAAATAAATACATTTTTATTACTCTTCAGTATGGAGCTTAAAGTCTAAGGAAAACCTATGAGCTTGTCAAGCCTCCCCTTCTGCTCCACACAACCTCAGTGAAATCTGAAATCAGCGCAATTTCGGGGCAAAGTCCACTCCCCAGGTGCGGCCTCCTTGCAACCTCTTTGCCCTTCCCAACTAGTCTGAGACACTCAGGACCTGCACTTCATCTTCTTTCAGTGCTCAGAAAGATTCTAATCAATGCCACTCCAAAAGTAAACATGTTTCCTCATCAGAAACTTTAAGTGACCTTAAGACTATCTTTACTTAATTTTACTGTTTGAAAATAAAGTTTCTAGGTTAGAATGAAAAAATGCGTAACCAGTGTGCAGACAAGAACATTCTTAATTTAGACAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6561:HG4_PB_pbsv_9281:HG2_PB_pbsv_9247:HG2_PB_PB10Xdip_29773:HG2_PB_PB10Xdip_29772:HG4_PB_HySA_13403:HG2_PB_HySA_16613:HG4_Ill_manta_2246:HG4_Ill_MetaSV_5247:HG4_Ill_GATKHCSBGrefine_6390:HG4_Ill_Cortex_3597:HG3_Ill_MetaSV_5186:HG3_Ill_GATKHCSBGrefine_6185:HG3_Ill_Cortex_3622:HG2_Ill_MetaSV_5011:HG2_Ill_GATKHCSBGrefine_6268:HG2_Ill_Cortex_8776:HG2_Ill_breakscan11_3939:HG3_PB_pbsv_9022:HG4_PB_SVrefine2PBcRDovetail_4575:HG4_Ill_SVrefine2DISCOVARDovetail_6573:HG3_PB_SVrefine2PBcRDovetail_4170:HG3_Ill_SVrefine2DISCOVARDovetail_6762:HG2_PB_SVrefine2PBcRplusDovetail_10871:HG2_PB_SVrefine2PB10Xhap12_6774:HG2_PB_SVrefine2Falcon1plusDovetail_11677:HG2_Ill_SVrefine2DISCOVARplusDovetail_12698;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_Cortex_8776:HG2_Ill_GATKHCSBGrefine_6268:HG2_Ill_MetaSV_5011:HG3_Ill_Cortex_3622:HG3_Ill_GATKHCSBGrefine_6185:HG3_Ill_MetaSV_5186:HG4_Ill_Cortex_3597:HG4_Ill_GATKHCSBGrefine_6390:HG4_Ill_MetaSV_5247:HG4_Ill_manta_2246;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0473506;ClusterMaxSizeDiff=0.045045;ClusterMaxEditDist=0.233074;PBcalls=12;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=434;DistBack=-83;DistForward=1;DistMin=-83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=107;REFWIDENED=8:17653758-17653864;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5302.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:1:22:0:34:./.:0:0:0:0:1/1:0:20:1/1:3:66:.:.:.
chr8	18617478	HG4_PB_pbsv_9291	A	AGGCCGGGCGGGGTGGCTCACGGCCTGTAATCGCCAGCACTTTGGGAGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAAACAAGGTGAAACCCCGTCTCTACTAAAATACAAAAAATTAGCCGGGCGCGTGGCGGCGCAACTGTAGTCCCCAGCTACTCCGGGAAAGGCCTGAGGCAGGAGAATGGCGTGAACACCGGAAAGCGAGAGATTGCAGTGACGCGAGATTGCGGCCACTAGCAGTCCGCAGTCCCGGCCATGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATGCAGAGCAG	10	PASS	ClusterIDs=HG2_PB_HySA_16626:HG4_PB_pbsv_9291:HG2_PB_pbsv_9258:HG2_PB_SVrefine2Falcon1plusDovetail_11684:HG4_PB_HySA_13418;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_9291;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0684524;ClusterMaxSizeDiff=0.0683507;ClusterMaxEditDist=0.166906;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=346;DistBack=0;DistForward=8491;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:18617479-18617478;PctSeqSimilarity=0.9622;PctSizeSimilarity=0.9682;PctRecOverlap=0.9366;SizeDiff=11;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=95;MatchId=5303.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:21:0|1:27:1:3:15:./.:0:0:0:0:0/1:32:5:0/1:5:11:.:.:.
chr8	19030249	HG2_PB_SVrefine2PBcRplusDovetail_10877	G	AGGGGAGGGAAAGGGGAAGAGGAGGGGGAGGGGAAGGGGAGGGAACGGGGATGGGGAGGGGGAGGGGAAGGGGAGGGAATGGGGAAGGGGAGGGGGAGGGGAAGGGGAGGGAAAGGGGAAGAGGAGGGGGAGGGGAAGGGGAGGGAATGGGGAAGGGGAGGGGGAGGGGAGGGAATGGGGAAGGGGAGGGGGAGGGGAAGGGGAGGGAATGGGGAAGAGGAGGGGGAGGGGAAGGGGAGGGAAGGGGGGAGGGGAGGGAACGGGGATGGGGAGGGGACGGGGAGGGAACGGGGATGGGGAGGGGACGGGGAGGGGGAGAAGGGACGGGAGGGGAGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4581:HG2_PB_SVrefine2PBcRplusDovetail_10877:HG4_PB_assemblyticsfalcon_25644:HG4_PB_SVrefine2Falcon1Dovetail_5621:HG2_PB_SVrefine2PB10Xhap12_6782:HG4_PB_pbsv_9293;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_10877;NumExactMatchSVs=1;ClusterMaxShiftDist=0.116208;ClusterMaxSizeDiff=0.116208;ClusterMaxEditDist=0.264615;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=335;DistBack=50;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=149;REFWIDENED=8:19030125-19030273;PctSeqSimilarity=0.9538;PctSizeSimilarity=0.9612;PctRecOverlap=0.7701;SizeDiff=13;StartDistance=71;EndDistance=71;GTMatch=1;TruScore=89;MatchId=5305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:42:1/1:1:6:1:8:./.:0:0:0:0:./.:2:1:./.:1:6:.:.:.
chr8	20479464	HG3_Ill_GATKHCSBGrefine_6209	A	ACACATACAACACACACCACACACAACACACATACCCACATCCCCCGACACCACACATCACACACAAACACACACACACAACACACACCACACGCACATCACACACAACATAACACACATACCCATATCCCCTGACACCACACACCACACACGCCACACAACACACACAACACACACACACCACACACCTCGCCCACATACACATCGCCCACCTCCCCAAACACACCACAAATGTACCACATACATACCACACACCATGCACAAACCACACACATACAACACACTCCACCCCACACACCACGCTCACACACCACACACCCCCATACACACCACACACAAACACCCACACACCCATGCCACACCCACACCACACCCATGCCACACCCCTCCCCAAACACCACATATGCACCACATACATACCACACACATGCCACACACCACACACAAACCACACACAAAAAACACACACTCCCCC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12714:HG4_PB_HySA_13432:HG2_PB_PB10Xdip_29804:HG2_PB_PB10Xdip_29803:HG2_Ill_breakscan11_3940:HG4_Ill_GATKHCSBGrefine_6404:HG3_Ill_MetaSV_5191:HG3_Ill_GATKHCSBGrefine_6209:HG2_Ill_GATKHCSBGrefine_6290:HG4_Ill_manta_2255:HG4_Ill_MetaSV_5253:HG2_Ill_MetaSV_5017:HG2_PB_pbsv_9268:HG2_PB_HySA_16641:HG3_PB_pbsv_9044:HG4_PB_SVrefine2PBcRDovetail_4586:HG4_PB_SVrefine2Falcon1Dovetail_5627:HG4_Ill_SVrefine2DISCOVARDovetail_6592:HG3_Ill_SVrefine2DISCOVARDovetail_6779:HG2_PB_SVrefine2PBcRplusDovetail_10882:HG2_PB_SVrefine2PB10Xhap12_6788;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6290:HG3_Ill_GATKHCSBGrefine_6209:HG3_Ill_MetaSV_5191:HG4_Ill_GATKHCSBGrefine_6404;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0661157;ClusterMaxSizeDiff=0.0614754;ClusterMaxEditDist=0.232089;PBcalls=10;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=474;DistBack=-1;DistForward=13754;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=251;REFWIDENED=8:20479412-20479662;PctSeqSimilarity=0.9958;PctSizeSimilarity=0.9916;PctRecOverlap=0.9916;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5306.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:1:15:0:14:./.:0:0:0:0:1/1:0:14:1/1:2:115:.:.:.
chr8	21551294	HG4_Ill_250bpfermikitraw_12427	A	AGAGGGGAAGGAGAGAGGAAAGGAAGGGGAAGGAGAGAGGAAGGGGTAGGGGAGAGGAAGGGGAAGGGAAGGAGAGAGAAAGGG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12719:HG4_PB_HySA_13441:HG4_PB_pbsv_9308:HG2_PB_PB10Xdip_29812:HG2_PB_pbsv_9274:HG3_PB_HySA_13900:HG3_PB_pbsv_9051:HG4_Ill_manta_2256:HG4_Ill_Krunchall_13064:HG4_Ill_GATKHC_15008:HG4_Ill_GATKHCSBGrefine_6409:HG4_Ill_250bpfermikitraw_12427:HG4_Ill_150bpfermikitraw_11908:HG3_Ill_Spiral_9739:HG3_Ill_Krunchall_12471:HG3_Ill_GATKHC_14913:HG3_Ill_GATKHCSBGrefine_6214:HG3_Ill_250bpfermikitraw_12124:HG3_Ill_150bpfermikitraw_11771:HG2_Ill_SpiralSDKrefine_16768:HG2_Ill_Krunchall_12794:HG2_Ill_GATKHC_14948:HG2_Ill_GATKHCSBGrefine_6293:HG2_Ill_250bpfermikitraw_12486:HG2_Ill_150bpfermikitraw_11734:HG4_Ill_svaba_11724:HG3_Ill_svaba_11723:HG2_Ill_svaba_11621:HG2_Ill_breakscan11_3942:HG2_PB_HySA_16654:HG4_PB_SVrefine2Falcon1Dovetail_5632:HG4_Ill_SVrefine2DISCOVARDovetail_6599:HG3_Ill_SVrefine2DISCOVARDovetail_6783:HG2_PB_SVrefine2Falcon1plusDovetail_11688;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11734:HG2_Ill_250bpfermikitraw_12486:HG2_Ill_GATKHCSBGrefine_6293:HG2_Ill_GATKHC_14948:HG2_Ill_Krunchall_12794:HG2_Ill_SpiralSDKrefine_16768:HG3_Ill_150bpfermikitraw_11771:HG3_Ill_250bpfermikitraw_12124:HG3_Ill_GATKHCSBGrefine_6214:HG3_Ill_GATKHC_14913:HG3_Ill_Krunchall_12471:HG3_Ill_Spiral_9739:HG4_Ill_150bpfermikitraw_11908:HG4_Ill_250bpfermikitraw_12427:HG4_Ill_GATKHCSBGrefine_6409:HG4_Ill_GATKHC_15008:HG4_Ill_Krunchall_13064:HG4_Ill_manta_2256;NumExactMatchSVs=18;ClusterMaxShiftDist=0.107143;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.21118;PBcalls=9;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=83;DistBack=4531;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=72;REFWIDENED=8:21551262-21551333;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5307.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:0:25:4:19:./.:0:0:0:0:1/1:0:30:./.:.:.:.:.:.
chr8	21554395	HG2_PB_SVrefine2PB10Xhap12_6792	G	GAGGGGGAGGGGACAGAGTGAGAGGAGAGGGGACATAGTAGAGGGAAGGGGACAGAGGAAGGGGGAGGGGACAGAGGAAAGGGGAAGGGACAAAGGAGAGGGCAGGGGAGAGAAGAGAGAGGGGACAGAGGGAGAGATGAAGGGACAGAGGAGAGGGGAGGAGACAGAGGAGAGGGAAGGGGACCGAGGAGGGTAGATGGGACAGAGGAAAGGGGAAGGGACAGAGGAGAAGGGAGGGGAGAGAAGGGGAAGGGGACAGAGGCAGAGGGGAAGGGACAGAGGAGATGGGAGGGGAGAGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5633:HG3_PB_HySA_13903:HG4_PB_pbsv_9309:HG3_PB_pbsv_9052:HG2_PB_pbsv_9275:HG2_PB_PB10Xdip_29813:HG3_PB_HySA_13902:HG4_PB_HySA_13442:HG2_PB_HySA_16655:HG4_PB_SVrefine2PBcRDovetail_4590:HG2_PB_SVrefine2PBcRplusDovetail_10886:HG2_PB_SVrefine2PB10Xhap12_6792:HG2_PB_SVrefine2Falcon1plusDovetail_11689;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11689:HG2_PB_SVrefine2PB10Xhap12_6792:HG2_PB_SVrefine2PBcRplusDovetail_10886;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0863787;ClusterMaxSizeDiff=0.0797342;ClusterMaxEditDist=0.263333;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=298;DistBack=740;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=334;REFWIDENED=8:21554396-21554729;PctSeqSimilarity=0.9578;PctSizeSimilarity=0.9866;PctRecOverlap=0.3211;SizeDiff=4;StartDistance=-201;EndDistance=-201;GTMatch=0;TruScore=75;MatchId=5308.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:0:16:1:13:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr8	21624306	HG2_Ill_SVrefine2DISCOVARplusDovetail_12720	C	CACAGCCACTCCCACACACACACACTGACACGCAAACACACACCACACCACACACACACAACACCCCATACATTACCCCATACACACCTACACACACTACACACCACACACACTATATACACTACCCCATACACATGTACACACACACCACACACACACCATACACTACCCCATACACACGTACACACATCACACACCACACCCCATACACTACCCCATACACACCTACACACACACCACACACACACCCCATACACACCTACACACACACCACACACAACACACACACTATATACACTACCCCATACACATGTACACACACCCCACACACACCATATACTACCCCATACACATGTACACACACACCTACACACACCACACACTATATACACTACCCCATACACATGTACACACATACCACACACAACACACCATACACTACCCCATACACACGTATACACACACATCACACACCACACCCCATACCCTACCCCATAGACACATACACACACACCACACATACACTATATACACTACCCCATACACACACACACAACACACCATACACTACCTCATACATACACACATCTATACACACACTATACACGCCACGCTCCATATGCTACCCCACACACACACAACACCCCATACACTACTCCATACACACCTACACACACACCACACACAAAACACACCATACACTACCCCATACACTGCTACACACACACCACACTCACACTATATACACTATCACATACACACCTACACACACACAACACACCATACACTACCCCATACACATGTACACACACACCTATACACACACCACACCCCATATGCTTCCCCATACACACCTACACACACACCACACACAACACCCCATAAACTACCCCATACACTCCTACACACACACCACACACACTACACACACACTATATACACTATCCCATACACACCTACACACAAATACACTATACACTACCCCATATACACATACACACACACCTATACACACACCACACACACCATACCCCATACTCTACCCCATACACACTACACACACAACACCCCATACACTACCCCATACACTCCTACACACACACACCACATACACCACACACACCATACCCCATACACTACCCCAAACACACCTACACACATACACCTACATAAACACACCACGCAACACCCCATACACTACCTCACACACACCTACACATACCACACACAGCACCACATACATTACCTCACATACACACCACAGGTACCACACCACACACCTACACACACACCCCACATATACATCACCCTACACACACTTACATACACACCATGTAACACCACACACATCCCATACACTACCCCACATACACCTGCACCCCATACATACCTACACATGCCATACACAATACCCCATACACTACCCCATACACACCTACACACACCACACACACCTATAAACACCCCACCCCACACATAAACCACCCCACACACCTACCTACCATACAGATACCATACACACACACAACACCCCATATGCTACCTCACACACACCACCCCCCACACACCTACACACACATATTACACATACATAACACACAAACAGCCCATACACTACCGCAAACACACCTACACACACATCACCACACACAACACCCCATACATTACCCTATACACACCTACACACAAAACACACACACAACACCCCACAAATACACCACCCCCACACACCTACACACACACCACACATAACACCCCATACATTACCCTATACACACCTACACACACCCCTACACACACCACACACCTACACACACCACCCCACACATACACACACCACCCCACACACACCTATGTACACACCATACACACACACAAAACACTCTATAAACTACCTCACACACACCCACACACACAACCACCCCCCACACACCTACACACAGTACACATACACACCACATGCACAAGAGCCCATACGCACCTACACACAGCTATGCACACCTACACACACACCATCCTACACATACACCACCCCACACATACCTACATACACACACCACACACAACACCCCATACACTACCTCATAAACAACTACACATTACCCCACACACACCCACACACAACACACACACCCCATAAGCTACCTCATACACACCTACACACACACCATCTCACACATACACACTACACACACAACACCCCATACACTACCTCACACACACCTACACACACACCACCATACACACACACCACCCCATATTACTTCACACACACCCCT	20	PASS	ClusterIDs=HG3_PB_pbsv_9053:HG3_Ill_SVrefine2DISCOVARDovetail_6784:HG2_PB_HySA_16657:HG4_PB_pbsv_9310:HG4_PB_SVrefine2PBcRDovetail_4591:HG2_PB_pbsv_9276:HG4_Ill_SVrefine2DISCOVARDovetail_6600:HG2_Ill_SVrefine2DISCOVARplusDovetail_12720:HG2_PB_SVrefine2PBcRplusDovetail_10887:HG2_PB_SVrefine2PB10Xhap12_6793:HG2_PB_SVrefine2Falcon1plusDovetail_11690:HG4_PB_SVrefine2Falcon1Dovetail_5634:HG2_PB_HySA_16656:HG4_PB_HySA_13443:HG2_PB_PB10Xdip_29814;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12720:HG4_Ill_SVrefine2DISCOVARDovetail_6600;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0650128;ClusterMaxSizeDiff=0.0624465;ClusterMaxEditDist=0.265781;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=2278;DistBack=2823;DistForward=135;DistMin=135;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=8:21624307-21624309;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9987;PctRecOverlap=0.9982;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5309.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:43:1/1:1:10:0:15:./.:0:0:0:0:1/1:0:26:1/1:0:271:.:2433:.
chr8	22443148	HG3_Ill_250bpfermikitraw_12132	A	ACCCCTCCCCTCATCCCCCTCCCCTCATCCCCCTCCCCTCATCCCCCTCCCCTCATCCCCCTCCCCTCACCCCCCTCCCCTCACC	20	PASS	ClusterIDs=HG4_PB_pbsv_9312:HG4_PB_assemblyticsfalcon_25667:HG3_PB_HySA_13911:HG2_PB_pbsv_9278:HG3_PB_pbsv_9055:HG2_PB_PB10Xdip_29833:HG4_PB_HySA_13448:HG2_PB_HySA_16664:HG3_Ill_SVrefine2DISCOVARDovetail_6793:HG3_Ill_250bpfermikitraw_12132:HG2_PB_SVrefine2PB10Xhap12_6796;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6796:HG3_Ill_250bpfermikitraw_12132:HG3_Ill_SVrefine2DISCOVARDovetail_6793;NumExactMatchSVs=3;ClusterMaxShiftDist=0.111801;ClusterMaxSizeDiff=0.111801;ClusterMaxEditDist=0.214286;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=89149;DistForward=23;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=8:22443149-22443173;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5310.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:0:19:1:25:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr8	22779966	HG3_Ill_GATKHCSBGrefine_6215	G	GTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAACAAAAACAAAAAAACAAAAAAAACAAAAGACTAGGCACA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5639:HG3_PB_HySA_13914:HG2_PB_PB10Xdip_29837:HG2_PB_pbsv_9282:HG4_Ill_GATKHCSBGrefine_6410:HG3_Ill_GATKHCSBGrefine_6215:HG2_Ill_GATKHCSBGrefine_6294:HG3_Ill_manta_2148:HG3_Ill_MetaSV_5193:HG2_Ill_MetaSV_5018:HG4_PB_pbsv_9317:HG4_PB_assemblyticsfalcon_25674:HG2_PB_HySA_16674:HG4_PB_HySA_13463:HG2_PB_SVrefine2PBcRplusDovetail_10891:HG2_PB_SVrefine2PB10Xhap12_6799:HG2_10X_SVrefine210Xhap12_6586:HG2_PB_SVrefine2Falcon1plusDovetail_11694;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6294:HG3_Ill_GATKHCSBGrefine_6215:HG4_Ill_GATKHCSBGrefine_6410;NumExactMatchSVs=3;ClusterMaxShiftDist=0.126437;ClusterMaxSizeDiff=0.126437;ClusterMaxEditDist=0.237885;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=349;DistBack=-4;DistForward=22626;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:22779967-22779966;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5311.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:./.:0:3:0:7:./.:0:0:0:0:1/1:1:32:1/1:2:64:.:.:.
chr8	23438364	HG2_10X_SVrefine210Xhap12_6589	A	ATATATGGTTTTATATATATATATGGTTTTATATATATGGTTTTATATATATATGGTTTTATATATATATATGTTTATATATATATATATATATATATATTT	20	PASS	ClusterIDs=HG4_PB_HySA_13467:HG2_PB_SVrefine2PBcRplusDovetail_10893:HG2_PB_HySA_16679:HG3_Ill_MetaSV_5195:HG3_Ill_GATKHCSBGrefine_6217:HG3_Ill_SVrefine2DISCOVARDovetail_6797:HG2_Ill_SVrefine2DISCOVARplusDovetail_12727:HG2_Ill_GATKHCSBGrefine_6296:HG2_10X_SVrefine210Xhap12_6589:HG4_PB_SVrefine2Falcon1Dovetail_5640:HG4_PB_assemblyticsfalcon_25677:HG2_PB_pbsv_9284:HG3_PB_HySA_13919:HG3_PB_pbsv_9061:HG4_PB_pbsv_9318;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6589:HG2_Ill_GATKHCSBGrefine_6296:HG2_Ill_SVrefine2DISCOVARplusDovetail_12727:HG3_Ill_SVrefine2DISCOVARDovetail_6797;NumExactMatchSVs=4;ClusterMaxShiftDist=0.211538;ClusterMaxSizeDiff=0.192308;ClusterMaxEditDist=0.293333;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=101;DistBack=11;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=8:23438343-23438365;PctSeqSimilarity=0.9763;PctSizeSimilarity=0.9712;PctRecOverlap=0.7619;SizeDiff=-3;StartDistance=23;EndDistance=23;GTMatch=0;TruScore=90;MatchId=5312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:0|1:20:0:3:33:./.:0:0:0:0:0/1:6:12:./.:.:.:.:.:.
chr8	24779100	HG2_PB_SVrefine2Falcon1plusDovetail_11698	T	TAAGAACAGATTTTTGGCCGGGCGGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGTGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGGAGCTTGCAGTGAGCGGAGATCGCGCCACAGCACTCCCGCCTGGGCGACAGAACGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_9289:HG2_PB_PB10Xdip_29855:HG2_PB_HySA_16696:HG3_PB_HySA_13934:HG2_PB_assemblyticsfalcon_26256:HG4_PB_assemblyticsfalcon_25687:HG2_PB_SVrefine2Falcon1plusDovetail_11698:HG4_PB_SVrefine2Falcon1Dovetail_5642:HG2_PB_SVrefine2PB10Xhap12_6805:HG2_PB_SVrefine2PBcRplusDovetail_10896:HG3_PB_SVrefine2PBcRDovetail_4173:HG2_Ill_breakscan11_3943:HG3_PB_pbsv_9066;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11698;NumExactMatchSVs=1;ClusterMaxShiftDist=0.234506;ClusterMaxSizeDiff=0.220736;ClusterMaxEditDist=0.274247;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=8;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=8:24779101-24779114;PctSeqSimilarity=0.989;PctSizeSimilarity=0.9781;PctRecOverlap=0.9751;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5314.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:39:0|1:16:1:1:38:./.:0:0:0:0:0/1:22:12:0/1:10:49:.:.:.
chr8	24945572	HG2_PB_PB10Xdip_29856	G	GGAGAGGAAGGGGAGGGGGGAAGGGGAGGGGGGAAGGGGAAAGGAAAGGGGAAGGAGAAGGGGAATGGAGAGGGGAAAGGAGAGGGGAAGGGAGAGGAGAAGGGAGAGGGGAAGGGAGAGGGGAAGGGAGAGGGGAAGGGAGAGGGGAAGGGAGAGGGGAAGGGAGAGGGGGAGGGGGTAGGGGAAGCAGAGGGGGAGGGGAAGGGGGAGGAGAAAGGGAGGGGGAGGGGAAGGGAGGGGAAGCAGAGGGGGAGGGGAAGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGAGGGAGCAGGGGAGGGGAGGGAGATGGGAAGGGGGAGGGAGGGGGGAGGAGGAGGGGGAGGGGAGGGAGATGGGGAGGGGAAGGGGGAGGGAGAGGGGGAGGAGGAGGGGAGGGAAGGGGGAGGGGCAGGGGAGGGGCAGGGGGAGGAGAAGGGGAGGGGCAGGGGAGGAGAAGGGAGGGACAGGGGGAGAGGAAGGGGAAAGGGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5643:HG4_PB_HySA_13483:HG2_PB_HySA_16697:HG2_PB_HySA_16698:HG3_PB_pbsv_9067:HG2_PB_PB10Xdip_29857:HG2_PB_PB10Xdip_29856:HG2_PB_pbsv_9290:HG2_PB_SVrefine2Falcon1plusDovetail_11699:HG4_PB_SVrefine2PBcRDovetail_4600:HG3_PB_SVrefine2PBcRDovetail_4174:HG2_PB_SVrefine2PB10Xhap12_6806:HG2_PB_SVrefine2PBcRplusDovetail_10897;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_29856:HG2_PB_PB10Xdip_29857;NumExactMatchSVs=2;ClusterMaxShiftDist=0.192651;ClusterMaxSizeDiff=0.192651;ClusterMaxEditDist=0.251656;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=498;DistBack=14;DistForward=24;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=8:24945573-24945573;PctSeqSimilarity=0.9862;PctSizeSimilarity=0.9727;PctRecOverlap=0.9727;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=5315.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:1:17:0:15:./.:0:0:0:0:./.:0:6:0/1:3:16:.:.:.
chr8	25172651	HG3_Ill_GATKHCSBGrefine_6226	T	TTCTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6810:HG2_PB_SVrefine2PBcRplusDovetail_10901:HG2_PB_HySA_16707:HG2_PB_pbsv_9295:HG3_Ill_GATKHCSBGrefine_6226:HG4_PB_HySA_13485:HG2_PB_HySA_16706:HG3_PB_pbsv_9071:HG4_PB_pbsv_9329:HG4_Ill_MetaSV_5258:HG3_Ill_MetaSV_5200:HG2_PB_SVrefine2PB10Xhap12_6811:HG4_PB_assemblyticsfalcon_25694:HG2_PB_assemblyticsfalcon_26265:HG4_PB_SVrefine2Falcon1Dovetail_5646:HG4_PB_SVrefine2PBcRDovetail_4604:HG2_PB_SVrefine2Falcon1plusDovetail_11703:HG3_PB_HySA_13937;NumClusterSVs=18;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_6226;NumExactMatchSVs=1;ClusterMaxShiftDist=0.319149;ClusterMaxSizeDiff=0.315603;ClusterMaxEditDist=0.341727;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=297;DistBack=-9;DistForward=12;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:25172652-25172651;PctSeqSimilarity=0.99;PctSizeSimilarity=0.9867;PctRecOverlap=0.9867;SizeDiff=-4;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=98;MatchId=5316.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:22:0|1:18:2:0:22:./.:0:0:0:0:0/1:23:5:./.:.:.:.:.:.
chr8	25885066	HG3_Ill_GATKHCSBGrefine_6234	C	CACAATATGGAAGAACAATAAGGAACTTCCATATTGTTTTCTACAGCAACTGTACTATTTTACATTGGCAGCAATGTAAAATAGCAGTAGCATTTTACGCTGGTGGCAATGCAAAATAGTACAGTTGCTATAGAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3944:HG3_PB_pbsv_9077:HG4_PB_pbsv_9333:HG4_PB_SVrefine2PBcRDovetail_4607:HG4_PB_assemblyticsfalcon_25699:HG2_PB_assemblyticsfalcon_26271:HG4_PB_SVrefine2Falcon1Dovetail_5648:HG4_Ill_svaba_11771:HG4_Ill_manta_2260:HG4_Ill_SVrefine2DISCOVARDovetail_6625:HG4_Ill_MetaSV_5259:HG4_Ill_GATKHCSBGrefine_6426:HG4_Ill_Cortex_3611:HG3_PB_SVrefine2PBcRDovetail_4180:HG3_Ill_svaba_11767:HG3_Ill_manta_2153:HG3_Ill_Spiral_9768:HG3_Ill_SVrefine2DISCOVARDovetail_6813:HG3_Ill_MetaSV_5203:HG3_Ill_GATKHCSBGrefine_6234:HG3_Ill_Cortex_3637:HG3_Ill_150bpfermikitraw_11810:HG2_PB_SVrefine2PBcRplusDovetail_10904:HG2_PB_SVrefine2PB10Xhap12_6814:HG2_PB_SVrefine2Falcon1plusDovetail_11706:HG2_Ill_svaba_11669:HG2_Ill_manta_2639:HG2_Ill_SpiralSDKrefine_16796:HG2_Ill_SVrefine2DISCOVARplusDovetail_12744:HG2_Ill_MetaSV_5023:HG2_Ill_GATKHCSBGrefine_6313:HG2_Ill_Cortex_8812:HG2_10X_SVrefine210Xhap12_6600:HG2_PB_PB10Xdip_29873:HG2_PB_PB10Xdip_29872:HG2_PB_pbsv_9300;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6600:HG2_Ill_Cortex_8812:HG2_Ill_GATKHCSBGrefine_6313:HG2_Ill_MetaSV_5023:HG2_Ill_SVrefine2DISCOVARplusDovetail_12744:HG2_Ill_SpiralSDKrefine_16796:HG2_Ill_manta_2639:HG2_Ill_svaba_11669:HG2_PB_SVrefine2Falcon1plusDovetail_11706:HG2_PB_SVrefine2PB10Xhap12_6814:HG2_PB_SVrefine2PBcRplusDovetail_10904:HG3_Ill_150bpfermikitraw_11810:HG3_Ill_Cortex_3637:HG3_Ill_GATKHCSBGrefine_6234:HG3_Ill_MetaSV_5203:HG3_Ill_SVrefine2DISCOVARDovetail_6813:HG3_Ill_Spiral_9768:HG3_Ill_manta_2153:HG3_Ill_svaba_11767:HG3_PB_SVrefine2PBcRDovetail_4180:HG4_Ill_Cortex_3611:HG4_Ill_GATKHCSBGrefine_6426:HG4_Ill_MetaSV_5259:HG4_Ill_SVrefine2DISCOVARDovetail_6625:HG4_Ill_manta_2260:HG4_Ill_svaba_11771:HG4_PB_SVrefine2Falcon1Dovetail_5648:HG4_PB_SVrefine2PBcRDovetail_4607;NumExactMatchSVs=28;ClusterMaxShiftDist=0.231343;ClusterMaxSizeDiff=0.231343;ClusterMaxEditDist=0.292135;PBcalls=13;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=135;DistBack=21988;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=8:25885067-25885078;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5317.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:0:26:0:35:./.:0:0:0:0:./.:2:34:./.:.:.:.:.:.
chr8	25912374	HG3_Ill_manta_2154	G	GTACGTATATATACACGTACGTATATTTACTGGATGTAAATTTACTGGATGTAAATTTCCAGTTCTAATTTTAAAATCTCTCTCTCTCTCCATATATATATACACATGTATATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5649:HG4_PB_assemblyticsfalcon_25700:HG2_PB_pbsv_9301:HG3_PB_HySA_13948:HG4_PB_pbsv_9334:HG3_PB_pbsv_9078:HG4_Ill_MetaSV_5260:HG4_PB_SVrefine2PBcRDovetail_4608:HG4_Ill_GATKHCSBGrefine_6427:HG3_PB_SVrefine2PBcRDovetail_4181:HG3_Ill_manta_2154:HG3_Ill_Spiral_9769:HG3_Ill_SVrefine2DISCOVARDovetail_6814:HG3_Ill_MetaSV_5204:HG3_Ill_GATKHCSBGrefine_6235:HG2_Ill_MetaSV_5024:HG2_Ill_GATKHCSBGrefine_6314:HG2_Ill_250bpfermikitraw_12529;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12529:HG2_Ill_GATKHCSBGrefine_6314:HG2_Ill_MetaSV_5024:HG3_Ill_GATKHCSBGrefine_6235:HG3_Ill_MetaSV_5204:HG3_Ill_SVrefine2DISCOVARDovetail_6814:HG3_Ill_Spiral_9769:HG3_Ill_manta_2154:HG3_PB_SVrefine2PBcRDovetail_4181:HG4_Ill_GATKHCSBGrefine_6427:HG4_Ill_MetaSV_5260;NumExactMatchSVs=11;ClusterMaxShiftDist=0.180995;ClusterMaxSizeDiff=0.171946;ClusterMaxEditDist=0.218182;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=113;DistBack=6;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=8:25912375-25912397;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:36:0|1:31:4:0:38:./.:0:0:0:0:0/1:18:17:./.:.:.:.:.:.
chr8	25935929	HG4_PB_SVrefine2PBcRDovetail_4609	C	CCCCCTGCCCTGTCCCGCCTCCTGTCACAGCCCCCACTGTCTTCACTGCTGTGTGACACCCTGCCCCTGCCCTGTCCCGCCTCCTGTCACAGCCCCCACTGTCTTCACTGCTGTGTGACACCCTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11707:HG2_PB_assemblyticsfalcon_26272:HG2_PB_pbsv_9302:HG4_PB_SVrefine2PBcRDovetail_4609:HG3_PB_HySA_13950;NumClusterSVs=5;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_4609;NumExactMatchSVs=1;ClusterMaxShiftDist=0.032;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.12749;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=124;DistBack=-9;DistForward=24844;DistMin=-9;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=183;REFWIDENED=8:25935785-25935967;PctSeqSimilarity=0.9915;PctSizeSimilarity=0.9841;PctRecOverlap=0.126;SizeDiff=-2;StartDistance=110;EndDistance=110;GTMatch=0;TruScore=70;MatchId=5319.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:16:1|0:1:13:22:1:./.:0:0:0:0:0/1:8:3:./.:.:.:.:.:.
chr8	26144968	HG4_PB_SVrefine2PBcRDovetail_4614	C	CTGGGAGTGTTGGGGTGGGGGTGGCGGGGTGCGTGGGAGTGTTGGGCTGGGGGTGGCGGGGTGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11711:HG3_PB_pbsv_9083:HG2_PB_pbsv_9307:HG2_PB_HySA_16724:HG4_PB_HySA_13500:HG2_PB_PB10Xdip_29880:HG2_PB_PB10Xdip_29879:HG4_PB_pbsv_9339:HG4_PB_SVrefine2PBcRDovetail_4614:HG2_PB_SVrefine2PBcRplusDovetail_10909:HG2_PB_SVrefine2PB10Xhap12_6818;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11711:HG4_PB_SVrefine2PBcRDovetail_4614:HG2_PB_SVrefine2PBcRplusDovetail_10909:HG2_PB_SVrefine2PB10Xhap12_6818;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0615385;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.1875;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=64;DistBack=24360;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=164;REFWIDENED=8:26144969-26145132;PctSeqSimilarity=0.9776;PctSizeSimilarity=0.9846;PctRecOverlap=0.2923;SizeDiff=-1;StartDistance=-46;EndDistance=-46;GTMatch=0;TruScore=75;MatchId=5321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:1:16:2:9:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr8	26167514	HG2_PB_SVrefine2PB10Xhap12_6819	T	TTCGGCCAGGCGTGGTGGCTCACCCCTGTAATCCTAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAAGATATCTAGACCATCTTGGCCAACATGATGAAATCCCGCCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCGTACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCATTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAAGCCTGGGCAACAGGGCAAGACTCCATCTCAAAAAAAGTGCCTTTCTAGCAAGGTTGCTGCAAACTTACTTTTTTTTTTTTTTTGAGATGTAGTCCCACTCTGTTGCCCAGGTTGTAGTGCTGTGGCGCGATCTCGCCTCACTGCAACCTCTGCCTCCTAGGTTCAAGTGATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCTGACCACCACACCTGGCTAATTTTTTTGTATGTTTAGTAGAGACGGGGCTTCATCGTGTTGGCCAGGTTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGCCTCAGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCCCTGCACCTGACGACAAACTTTCAATTTATAAAAAACACAGTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4186:HG2_PB_pbsv_9308:HG2_Ill_Spiral_651:HG3_PB_pbsv_9084:HG4_PB_pbsv_9340:HG2_PB_PB10Xdip_29882:HG2_PB_PB10Xdip_29881:HG2_PB_HySA_16725:HG4_Ill_GATKHCSBGrefine_6434:HG2_Ill_GATKHCSBGrefine_6318:HG4_PB_HySA_13501:HG3_PB_HySA_13957:HG2_PB_SVrefine2Falcon1plusDovetail_11712:HG4_PB_SVrefine2PBcRDovetail_4615:HG2_PB_SVrefine2PBcRplusDovetail_10910:HG2_PB_SVrefine2PB10Xhap12_6819:HG2_10X_SVrefine210Xhap12_6604:HG3_Ill_SVrefine2DISCOVARDovetail_6819:HG4_Ill_SVrefine2DISCOVARDovetail_6628:HG2_Ill_SVrefine2DISCOVARplusDovetail_12747:HG4_PB_SVrefine2Falcon1Dovetail_5655;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6604:HG2_PB_SVrefine2PB10Xhap12_6819:HG2_PB_SVrefine2PBcRplusDovetail_10910;NumExactMatchSVs=3;ClusterMaxShiftDist=0.110613;ClusterMaxSizeDiff=0.107623;ClusterMaxEditDist=0.178649;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=651;DistBack=22452;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=289;REFWIDENED=8:26167515-26167803;PctSeqSimilarity=0.9814;PctSizeSimilarity=0.9939;PctRecOverlap=0.6412;SizeDiff=-4;StartDistance=-233;EndDistance=-233;GTMatch=0;TruScore=87;MatchId=5322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:1/1:1:30:0:17:./.:0:0:0:0:1/1:0:21:1/1:5:92:.:.:.
chr8	26856601	HG2_PB_HySA_16736	C	CGATAACAGTTGGGGAGATCTGATCTAGCCAATCCTCTTGCCTTTAGCCTTCACGCTTCCTTTAATTATTTCTGGGCTTAAGCCAAGCTAACTTTGGGAAACATTTAATATATTGTTCAAATGATAATAGCCCTTCCCCCAAACTCAACCATCTTAATAAAGCTAATGAGAGTGCCACCAAGCTAGGAGGATAGAAGAGCCTGAATTCTGCTAAGGTGTAGATATAAAGGCTTGCCAGACATTATTCCAGAATTCACAAGATTTTCAACTTTCTCTATTACTCCTGCAGCCTAAGATTGGCCCTTTGAGACACCTTTTCAGATTTTCTGCATGTCTGACCCTGATGGCTCCACCTGGACTCACCAACTGCTCATGTGGTCCCACCCACACTCTTGTGGGTCTACTCAGCGCAAGAGGACAATTTCAACTCCTAATGATTTCATCTCCCATCAACACTCCTCGTACCCTAGCCCCCTGCCCACCAAACTACCTTTGAAGAACCCCTAACTTATGAGCTTTTGATGATACTGATTTGAGTAATGACTCTGCTATGTGGGGTGGCTGGCCTTGCATCAATTAAACTCTTTCTTTACTGCAATGCCATGATCTATTTTGTTTGTGCAGGGGGATGGAAGAAACTTTTAGGCTGTTACAGTATGGCTTAGAATATTGGTAAGCATACCATGTGCACATAAAGCAAATTTGCATTCTGTTATTGTTGGGTGTTGTTTTCAACTAAGTAAAGGTAGATAATATTTTTGTCTTATTTTTTCTAATAGTTTTTATTATGTACTCAGGAAGTATTAAAAAATCCATTATTAGAATTGTGATTGACTGTTTCTCTTTTTAGTCCTGTCAATTTCGGCATTATGTATTTTTTATTTGTTTCATGTATGTTTTATTGTTATATCTTCCTCTTGAATTTACCCTTTTATTATTATGAAGCTTACCTTTTTATTTCCATTTTTGCAAGTTATTTTTTAAGTTTGTTTGACCTAATATTAATATAGTCGGTTCAGCTTTTTTACATTTTATCATCCATTAACTTTTAACGTATCTGCATTTTTATTTAAACGTGTATCCTGTAGAGAACATATAGTGGTGTCTCGTTTCTTTATCCATCTGGACAATCTCTGTTTTTTAATCGAATGTTAAGTTCATTAATATTTAATATTATTATCAGTATGGTTTGGTTTGAGTCTAGCTTTTAAAAAAATTTGTTTTGTCCTTGCTTGTTTTTTGCTGTTATTACTTTGTACCCCCTTTCCTTCCTCTTTTTGGATAATTTGAATATTTGTATAAATACCATCTTAATTTTCCTAATGGCATACCTATTATTTTTTGCATTATTTTTATAGTGGTTCCTTAGGGAATATAATATATATTCAGAACTTTCAATGAGCCAACTTATAGTTAATAATGCACTATTTTAACTGCATACCACAAATTCAAGAAATTAAAAATATTTTCTATTTTTTCTTATTTCTTGCTTGACTCAATGGTTATTTAAAAATAAGTGTGTAATTGCAAATATTTAATGCTTCCTAGGTTACTTAATTTTGCTTATTTTTTTTTAAGATAATGCCATTGTAGCCATTCTCTGTATGATTTTTTTGCACTGAAACCACCTTTGCAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6821:HG2_PB_pbsv_9313:HG2_PB_HySA_16736:HG4_PB_SVrefine2PBcRDovetail_4616:HG2_PB_SVrefine2Falcon1plusDovetail_11715;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_16736;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0470021;ClusterMaxSizeDiff=0.0463995;ClusterMaxEditDist=0.144019;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1639;DistBack=86472;DistForward=19973;DistMin=19973;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1638;REFWIDENED=8:26856385-26858022;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9939;PctRecOverlap=0.8646;SizeDiff=10;StartDistance=217;EndDistance=217;GTMatch=0;TruScore=95;MatchId=5323.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:56:1|0:3:27:44:2:./.:0:0:0:0:./.:25:2:0/1:58:40:.:1513:.
chr8	27970982	HG4_Ill_svaba_11788	C	CTTTTCAGCCTTAGGCTGGTCTAAATGACAGTAGTTTTGATTGGCCTGATTGAGT	20	PASS	ClusterIDs=HG3_PB_HySA_13976:HG3_PB_pbsv_9091:HG2_PB_HySA_16748:HG4_PB_pbsv_9347:HG2_Ill_breakscan11_3946:HG2_PB_SVrefine2PBcRplusDovetail_10916:HG4_PB_SVrefine2PBcRDovetail_4618:HG4_Ill_svaba_11788:HG4_Ill_manta_2262:HG4_Ill_SVrefine2DISCOVARDovetail_6632:HG4_Ill_Krunchall_13133:HG4_Ill_GATKHC_15091:HG4_Ill_GATKHCSBGrefine_6441:HG4_Ill_Cortex_3615:HG4_Ill_250bpfermikitraw_12488:HG4_Ill_150bpfermikitraw_11973:HG3_Ill_svaba_11789:HG3_Ill_manta_2156:HG3_Ill_Spiral_9790:HG3_Ill_Krunchall_12530:HG3_Ill_GATKHC_14990:HG3_Ill_GATKHCSBGrefine_6242:HG3_Ill_Cortex_3641:HG3_Ill_250bpfermikitraw_12183:HG3_Ill_150bpfermikitraw_11832:HG2_Ill_svaba_11690:HG2_Ill_manta_2643:HG2_Ill_SpiralSDKrefine_16808:HG2_Ill_SVrefine2DISCOVARplusDovetail_12756:HG2_Ill_Krunchall_12864:HG2_Ill_GATKHC_15020:HG2_Ill_GATKHCSBGrefine_6326:HG2_Ill_Cortex_8818:HG2_Ill_250bpfermikitraw_12548:HG2_Ill_150bpfermikitraw_11799:HG2_10X_SVrefine210Xhap12_6610:HG2_PB_SVrefine2PB10Xhap12_6824:HG2_PB_pbsv_9318;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6610:HG2_Ill_150bpfermikitraw_11799:HG2_Ill_250bpfermikitraw_12548:HG2_Ill_Cortex_8818:HG2_Ill_GATKHCSBGrefine_6326:HG2_Ill_GATKHC_15020:HG2_Ill_Krunchall_12864:HG2_Ill_SVrefine2DISCOVARplusDovetail_12756:HG2_Ill_SpiralSDKrefine_16808:HG2_Ill_manta_2643:HG2_Ill_svaba_11690:HG3_Ill_150bpfermikitraw_11832:HG3_Ill_250bpfermikitraw_12183:HG3_Ill_Cortex_3641:HG3_Ill_GATKHCSBGrefine_6242:HG3_Ill_GATKHC_14990:HG3_Ill_Krunchall_12530:HG3_Ill_Spiral_9790:HG3_Ill_manta_2156:HG3_Ill_svaba_11789:HG4_Ill_150bpfermikitraw_11973:HG4_Ill_250bpfermikitraw_12488:HG4_Ill_Cortex_3615:HG4_Ill_GATKHCSBGrefine_6441:HG4_Ill_GATKHC_15091:HG4_Ill_Krunchall_13133:HG4_Ill_SVrefine2DISCOVARDovetail_6632:HG4_Ill_manta_2262:HG4_Ill_svaba_11788:HG4_PB_SVrefine2PBcRDovetail_4618;NumExactMatchSVs=30;ClusterMaxShiftDist=0.169811;ClusterMaxSizeDiff=0.168224;ClusterMaxEditDist=0.212389;PBcalls=8;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=54;DistBack=91321;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=8:27970983-27970991;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:40:0|1:32:2:0:37:./.:0:0:0:0:0/1:27:37:./.:.:.:.:.:.
chr8	28124594	HG3_PB_pbsv_9092	T	TATTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTGAGACGGAGTCTCGACTTCTTGTCGCCCAGGCAGACTGCAGATGCCGTGGCGCAATCTCGGCTCACTCTGCAAGCTCCGCTCCCGGGGTTCACGCCATTTCCTGCCTCAGCCTCGCCGAGTAGCTGGACTTACAGGCGCCCGCCACCGCCAGCGGCTAATTTGTGTATTATTTTTTTTTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTTGACCTCATGATGCACCCGCCTCGGCCTCCCAAAAGTGCTGGGATTTTACAGCGTGAGCCACCGCGCCCGGCCCACCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3947:HG2_PB_pbsv_9319:HG3_PB_SVrefine2Falcon1Dovetail_5662:HG3_PB_pbsv_9092:HG3_PB_HySA_13979:HG2_PB_SVrefine2Falcon1plusDovetail_11718:HG2_PB_HySA_16750;NumClusterSVs=7;ExactMatchIDs=HG3_PB_pbsv_9092;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0543634;ClusterMaxSizeDiff=0.0542083;ClusterMaxEditDist=0.206128;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=359;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=8:28124595-28124598;PctSeqSimilarity=0.9477;PctSizeSimilarity=0.9582;PctRecOverlap=0.961;SizeDiff=15;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=95;MatchId=5325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:17:0|1:46:2:1:18:./.:0:0:0:0:0/1:30:6:0/1:10:15:.:.:.
chr8	29677919	HG3_Ill_SVrefine2DISCOVARDovetail_6835	T	TACACACACACTGCACCACTCACCACACACAACACACACACACCACACACAACACACACCCACATCACACGCATACCACGCATACACCACATACACACAACACACCACACACACCACACCACCACACACACCACACCACACACACACACCACAAACACGACACATATCACCCACACCACCCACACAACACACCACACACCCACATCACACACATGCACACCATACCACATACACATACACCACCACTTACACACTCCACACCACATACCACACACACACCACACACTACACATTACATACATACCACACACCACACAACCACACACACCATACCCACCACACACCACATATGCACACTACACATACCACATACACCATACCACAAACACTACACATTACACATGTACCACACACACTATATATACCACACATACCACACACACAAAACACACC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4620:HG2_PB_HySA_16761:HG4_PB_HySA_13538:HG4_PB_HySA_13537:HG3_Ill_GATKHCSBGrefine_6247:HG2_Ill_GATKHCSBGrefine_6331:HG4_Ill_GATKHCSBGrefine_6448:HG3_Ill_MetaSV_5208:HG2_Ill_MetaSV_5027:HG4_Ill_MetaSV_5264:HG2_PB_PB10Xdip_29894:HG2_PB_PB10Xdip_29893:HG4_PB_pbsv_9352:HG2_PB_SVrefine2Falcon1plusDovetail_11719:HG2_PB_pbsv_9323:HG4_PB_SVrefine2Falcon1Dovetail_5661:HG4_Ill_SVrefine2DISCOVARDovetail_6640:HG2_PB_SVrefine2PBcRplusDovetail_10918:HG2_PB_SVrefine2PB10Xhap12_6825:HG3_PB_SVrefine2PBcRDovetail_4192:HG3_Ill_SVrefine2DISCOVARDovetail_6835:HG2_Ill_SVrefine2DISCOVARplusDovetail_12765;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12765:HG3_Ill_SVrefine2DISCOVARDovetail_6835:HG3_PB_SVrefine2PBcRDovetail_4192;NumExactMatchSVs=3;ClusterMaxShiftDist=0.217654;ClusterMaxSizeDiff=0.191052;ClusterMaxEditDist=0.3289;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=452;DistBack=12;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=247;REFWIDENED=8:29677920-29678166;PctSeqSimilarity=0.9812;PctSizeSimilarity=0.9757;PctRecOverlap=0.8587;SizeDiff=11;StartDistance=-58;EndDistance=-58;GTMatch=0;TruScore=93;MatchId=5326.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:66:1/1:1:18:2:14:./.:0:0:0:0:1/1:0:12:1/1:1:109:.:.:.
chr8	30597940	HG2_PB_SVrefine2PBcRplusDovetail_10925	C	CCAGGCGCGGTGGTTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCATGAGGTCAAGAGATTGAGACCATCCTGGCCAACATGATGAAACCCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCATGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGAGAGGCAGAGGCTGCAGTGAGCCGAGATAGTGCCACTGCACTCCAGTCTGGCCACACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAGCAGAAAACAGAGAAAAAGCTCTCCCTATCCTTTGTATGTATATCCAGGACATACATTCTCCTTTACTGGAGGCAGCTCAAGACTCTTACCAGCCCAAAGTGGCACCAGAGGAATCTACAAACAAAACTTATCCCATTAGTTTCCTTGCATATGCAGTAGTTACCTTCCCACAGCCTCCCACCTTCTGAAGCCTAAAACCACCTTCCTTTGCCCTGTCATTTCCCCCCAAATTCACTGTTCTTTGTTAAACTCTGATAAGACAGAATTCTAAGCCATTGCTTTCAGTTACTTTTCACTGAGATTTCTCCTGTCTAATGCACACAGTATGCATTAATAAACTTGTTTTCTTCTTGTTAATCTGTCTTTTATTATATGAGTCCCAGCTAAGACCTAAGATGGGGAGAGGTGATCTTTAGCCTCTTCTACGTATATACTTGTGACATAGTTAATGATATACATGTCGAAGTATTTCAGGGAAAGTCTGCTAATGTTTGCAACTTTGAAAGGCATCAAAAACTAAGATTGATGAAAGGATGGAGGGATTGATAGGTATGTTATCAAATAAGGAGAATAAAATGTGAGTAAAAATAGTTTCCACTGTTGGTCTGAAAATTTTTATAATAAAATACTGAAAAAAATAATTGATTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAAGCTCCACCTCCTGGGTTCATGCCATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCGCCACCTCGCCTGGCTAATTTTTTGTGTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCACCCGCGTCGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCTACTGCACCTGGCCAATAATTGATTTTTTAAATGCAAAAATTATATAATAGTTGGGCGTGGTGATGCACACGTGTACTCCCAGCTACTCTGGAGGCTAAGGTGGGAGGATTGCTTGAGCCCAGGAGTTTAAGGCCAGCCTGGGGAACATGGTAAGACCTTCATCTCTCTAAAAAAAAAACTAAAAATTGTGATCTGAGAGACTAAAATAGACAACTATTTACCCCTTTATCAACTAAGATGGACCCTAAGGTTAAGGAAACAAAAAGTCAGCTACTTTTTGAGGGTTTAGGGCACAGCTGGCATGGCAATTTTCTAAATTCCTACAAGGAAAAAAACACATATGGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5664:HG3_PB_pbsv_9102:HG2_PB_pbsv_9334:HG4_PB_HySA_13551:HG2_PB_PB10Xdip_29916:HG2_PB_PB10Xdip_29915:HG4_PB_pbsv_9363:HG4_PB_assemblyticsfalcon_25747:HG2_PB_assemblyticsPBcR_25503:HG2_PB_assemblyticsfalcon_26312:HG4_PB_SVrefine2PBcRDovetail_4624:HG4_Ill_SVrefine2DISCOVARDovetail_6646:HG3_Ill_SVrefine2DISCOVARDovetail_6841:HG2_PB_SVrefine2PBcRplusDovetail_10925:HG2_PB_SVrefine2PB10Xhap12_6832:HG2_Ill_SVrefine2DISCOVARplusDovetail_12772:HG2_10X_SVrefine210Xhap12_6620:HG2_PB_SVrefine2Falcon1plusDovetail_11725:HG3_PB_SVrefine2PBcRDovetail_4196;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6620:HG2_Ill_SVrefine2DISCOVARplusDovetail_12772:HG2_PB_SVrefine2PB10Xhap12_6832:HG2_PB_SVrefine2PBcRplusDovetail_10925:HG3_Ill_SVrefine2DISCOVARDovetail_6841:HG4_Ill_SVrefine2DISCOVARDovetail_6646:HG4_PB_SVrefine2PBcRDovetail_4624;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0900671;ClusterMaxSizeDiff=0.0900671;ClusterMaxEditDist=0.220012;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1565;DistBack=17660;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=45;REFWIDENED=8:30597941-30597985;PctSeqSimilarity=0.9978;PctSizeSimilarity=1;PctRecOverlap=0.9802;SizeDiff=0;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=99;MatchId=5327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:0:9:1:8:./.:0:0:0:0:1/1:0:21:./.:13:225:.:1669:.
chr8	30808785	HG2_PB_SVrefine2PB10Xhap12_6833	T	TTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCCTCCCTCCCTCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCCTCCTTCCTCCC	20	PASS	ClusterIDs=HG2_PB_pbsv_9335:HG4_PB_SVrefine2Falcon1Dovetail_5665:HG4_PB_assemblyticsfalcon_25748:HG2_PB_assemblyticsPBcR_25504:HG2_PB_SVrefine2PBcRplusDovetail_10926:HG2_PB_SVrefine2PB10Xhap12_6833:HG2_PB_assemblyticsfalcon_26313:HG2_PB_SVrefine2Falcon1plusDovetail_11726:HG4_PB_SVrefine2PBcRDovetail_4625:HG2_PB_PB10Xdip_29918:HG2_PB_PB10Xdip_29917:HG3_PB_SVrefine2PBcRDovetail_4197:HG2_PB_SVrefine2Falcon1plusDovetail_11727:HG2_Ill_SVrefine2DISCOVARplusDovetail_12773:HG2_PB_HySA_16774;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6833:HG2_PB_SVrefine2PBcRplusDovetail_10926;NumExactMatchSVs=2;ClusterMaxShiftDist=0.165289;ClusterMaxSizeDiff=0.156379;ClusterMaxEditDist=0.254237;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=130;DistBack=-3;DistForward=9492;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=306;REFWIDENED=8:30808522-30808827;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9924;PctRecOverlap=0.5725;SizeDiff=-1;StartDistance=56;EndDistance=56;GTMatch=0;TruScore=85;MatchId=5328.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:1/1:2:24:0:11:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr8	31782684	HG2_Ill_250bpfermikitraw_12578	A	ATATACGTATATATACATATATATGTATATATACATATATACATATATACACATGTATACATATATATGTATATATAAAATGACATATATAATGACTTACATATATTGACTGGCAATATCCCTACTGG	20	PASS	ClusterIDs=HG4_PB_pbsv_9366:HG4_PB_SVrefine2PBcRDovetail_4627:HG2_PB_assemblyticsfalcon_26320:HG4_PB_assemblyticsfalcon_25755:HG2_PB_assemblyticsPBcR_25512:HG2_PB_HySA_16782:HG2_PB_SVrefine2Falcon1plusDovetail_11729:HG4_PB_SVrefine2Falcon1Dovetail_5667:HG4_Ill_manta_2272:HG4_Ill_SVrefine2DISCOVARDovetail_6649:HG4_Ill_MetaSV_5270:HG4_Ill_GATKHCSBGrefine_6455:HG4_Ill_250bpfermikitraw_12518:HG4_Ill_150bpfermikitraw_11999:HG3_PB_SVrefine2PBcRDovetail_4199:HG3_Ill_manta_2163:HG3_Ill_Spiral_9818:HG3_Ill_SVrefine2DISCOVARDovetail_6845:HG3_Ill_MetaSV_5211:HG3_Ill_GATKHCSBGrefine_6253:HG3_Ill_250bpfermikitraw_12212:HG3_Ill_150bpfermikitraw_11860:HG2_PB_SVrefine2PBcRplusDovetail_10928:HG2_PB_SVrefine2PB10Xhap12_6835:HG2_Ill_manta_2653:HG2_Ill_SpiralSDKrefine_16831:HG2_Ill_SVrefine2DISCOVARplusDovetail_12775:HG2_Ill_MetaSV_5032:HG2_Ill_GATKHCSBGrefine_6338:HG2_Ill_250bpfermikitraw_12578:HG2_Ill_150bpfermikitraw_11824:HG2_10X_SVrefine210Xhap12_6624:HG2_PB_PB10Xdip_29920:HG2_PB_PB10Xdip_29919:HG2_PB_pbsv_9338:HG3_PB_pbsv_9105;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6624:HG2_Ill_150bpfermikitraw_11824:HG2_Ill_250bpfermikitraw_12578:HG2_Ill_GATKHCSBGrefine_6338:HG2_Ill_MetaSV_5032:HG2_Ill_SVrefine2DISCOVARplusDovetail_12775:HG2_Ill_SpiralSDKrefine_16831:HG2_Ill_manta_2653:HG2_PB_SVrefine2PB10Xhap12_6835:HG2_PB_SVrefine2PBcRplusDovetail_10928:HG3_Ill_150bpfermikitraw_11860:HG3_Ill_250bpfermikitraw_12212:HG3_Ill_GATKHCSBGrefine_6253:HG3_Ill_MetaSV_5211:HG3_Ill_SVrefine2DISCOVARDovetail_6845:HG3_Ill_Spiral_9818:HG3_Ill_manta_2163:HG3_PB_SVrefine2PBcRDovetail_4199:HG4_Ill_150bpfermikitraw_11999:HG4_Ill_250bpfermikitraw_12518:HG4_Ill_GATKHCSBGrefine_6455:HG4_Ill_MetaSV_5270:HG4_Ill_SVrefine2DISCOVARDovetail_6649:HG4_Ill_manta_2272:HG4_PB_SVrefine2Falcon1Dovetail_5667:HG4_PB_SVrefine2PBcRDovetail_4627;NumExactMatchSVs=26;ClusterMaxShiftDist=0.12749;ClusterMaxSizeDiff=0.119522;ClusterMaxEditDist=0.278884;PBcalls=15;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=127;DistBack=196302;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=8:31782685-31782687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:2:28:2:12:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr8	32359971	HG2_Ill_SVrefine2DISCOVARplusDovetail_12778	A	ACTAAGCTCATTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAGTCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCACTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGTGCCCGCCACCACGCCCGGCCAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGC	20	PASS	ClusterIDs=HG4_PB_pbsv_9367:HG4_PB_HySA_13565:HG4_PB_assemblyticsfalcon_25761:HG2_PB_pbsv_9339:HG2_PB_assemblyticsfalcon_26328:HG2_Ill_breakscan11_3949:HG4_PB_SVrefine2Falcon1Dovetail_5668:HG4_Ill_MetaSV_5271:HG4_Ill_GATKHCSBGrefine_6456:HG2_PB_SVrefine2Falcon1plusDovetail_11730:HG2_Ill_SVrefine2DISCOVARplusDovetail_12778:HG2_Ill_MetaSV_5033:HG2_PB_HySA_16792;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_MetaSV_5033:HG2_Ill_SVrefine2DISCOVARplusDovetail_12778:HG2_PB_SVrefine2Falcon1plusDovetail_11730:HG4_Ill_GATKHCSBGrefine_6456:HG4_Ill_MetaSV_5271;NumExactMatchSVs=5;ClusterMaxShiftDist=0.237062;ClusterMaxSizeDiff=0.237062;ClusterMaxEditDist=0.273187;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=314;DistBack=38559;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:32359972-32359986;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5330.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:35:0|1:43:1:0:32:./.:0:0:0:0:0/1:16:14:0/1:7:27:.:.:.
chr8	33319687	HG2_PB_SVrefine2Falcon1plusDovetail_11733	G	AGGGAGAGGAGGGGACAGTGGGGAGGGGAGTGGAGGGAGGGGGGGAAGTGAGGGAAGGGGGGAGAGAGGAGGGGAGGGAGTGGAGGGCAGGGGAGGCAGAGAGAGGAGGGAAGGGAGTGGAGGGCAGGGGAGGCAGAGAGAGGAGGGAAGGGAGTGGAGGGCAGGGGAGGAGAGGAGGGGAGGAGGGGAAGGGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6839:HG4_PB_HySA_13573:HG4_PB_pbsv_9370:HG4_PB_SVrefine2PBcRDovetail_4629:HG4_PB_SVrefine2Falcon1Dovetail_5671:HG4_Ill_SVrefine2DISCOVARDovetail_6651:HG2_PB_SVrefine2PBcRplusDovetail_10931:HG2_PB_HySA_16797:HG4_PB_HySA_13572:HG2_PB_PB10Xdip_29927:HG2_PB_assemblyticsfalcon_26332:HG2_PB_SVrefine2Falcon1plusDovetail_11733:HG4_PB_assemblyticsfalcon_25766:HG3_PB_HySA_14015:HG2_PB_assemblyticsPBcR_25520:HG4_PB_HySA_13571:HG2_PB_pbsv_9345;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11733:HG2_PB_assemblyticsfalcon_26332;NumExactMatchSVs=2;ClusterMaxShiftDist=0.196721;ClusterMaxSizeDiff=0.196721;ClusterMaxEditDist=0.332454;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=193;DistBack=19;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:33319688-33319686;PctSeqSimilarity=0.9747;PctSizeSimilarity=0.9602;PctRecOverlap=0.9602;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=96;MatchId=5331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:5:17:1:25:./.:0:0:0:0:./.:1:6:./.:.:.:.:.:.
chr8	33761651	HG2_PB_SVrefine2Falcon1plusDovetail_11734	T	TCTGATGCATGTATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCCGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6627:HG2_PB_pbsv_9347:HG2_PB_HySA_16800:HG4_PB_pbsv_9372:HG4_PB_HySA_13578:HG2_PB_assemblyticsfalcon_26337:HG4_PB_assemblyticsfalcon_25771:HG4_PB_SVrefine2PBcRDovetail_4630:HG4_Ill_manta_2273:HG4_Ill_SVrefine2DISCOVARDovetail_6654:HG4_Ill_MetaSV_5273:HG4_Ill_GATKHCSBGrefine_6458:HG2_PB_SVrefine2Falcon1plusDovetail_11734:HG2_Ill_MetaSV_5035:HG4_PB_SVrefine2Falcon1Dovetail_5672;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_MetaSV_5035:HG2_PB_SVrefine2Falcon1plusDovetail_11734:HG4_Ill_GATKHCSBGrefine_6458:HG4_Ill_MetaSV_5273:HG4_Ill_SVrefine2DISCOVARDovetail_6654:HG4_Ill_manta_2273:HG4_PB_SVrefine2PBcRDovetail_4630;NumExactMatchSVs=7;ClusterMaxShiftDist=0.215548;ClusterMaxSizeDiff=0.215548;ClusterMaxEditDist=0.265018;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=284;DistBack=24;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=8:33761652-33761672;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5332.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:0|1:37:0:1:25:./.:0:0:0:0:0/1:30:9:./.:.:.:.:.:.
chr8	34099668	HG2_Ill_scalpel_8922	T	TGAGAGAGAGAATGTGAGTGTGAAAGAGGAGGGGCGAGAGAGAATGTGTGAGGAAGAAAGAGAGAAGGAGAGATGGGAGGGAGAGAAAGAAGTGA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12785:HG4_PB_assemblyticsfalcon_25773:HG2_PB_assemblyticsfalcon_26338:HG2_10X_SVrefine210Xhap12_6629:HG4_PB_pbsv_9374:HG3_PB_HySA_14017:HG3_PB_pbsv_9112:HG2_PB_PB10Xdip_29930:HG2_PB_pbsv_9349:HG2_PB_HySA_16803:HG4_PB_HySA_13580:HG4_PB_SVrefine2Falcon1Dovetail_5674:HG4_Ill_GATKHC_15148:HG4_Ill_GATKHCSBGrefine_6460:HG4_Ill_250bpfermikitraw_12541:HG4_Ill_150bpfermikitraw_12021:HG3_Ill_scalpel_9024:HG3_Ill_GATKHC_15043:HG3_Ill_GATKHCSBGrefine_6256:HG3_Ill_250bpfermikitraw_12230:HG2_PB_SVrefine2Falcon1plusDovetail_11736:HG2_Ill_scalpel_8922:HG2_Ill_GATKHC_15070:HG2_Ill_GATKHCSBGrefine_6343:HG2_Ill_250bpfermikitraw_12594:HG2_Ill_150bpfermikitraw_11839:HG4_PB_SVrefine2PBcRDovetail_4632:HG4_Ill_SVrefine2DISCOVARDovetail_6656:HG3_Ill_SVrefine2DISCOVARDovetail_6854:HG2_PB_SVrefine2PBcRplusDovetail_10933:HG2_PB_SVrefine2PB10Xhap12_6841;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11839:HG2_Ill_250bpfermikitraw_12594:HG2_Ill_GATKHCSBGrefine_6343:HG2_Ill_GATKHC_15070:HG2_Ill_scalpel_8922:HG2_PB_SVrefine2Falcon1plusDovetail_11736:HG3_Ill_250bpfermikitraw_12230:HG3_Ill_GATKHCSBGrefine_6256:HG3_Ill_GATKHC_15043:HG3_Ill_scalpel_9024:HG4_Ill_150bpfermikitraw_12021:HG4_Ill_250bpfermikitraw_12541:HG4_Ill_GATKHCSBGrefine_6460:HG4_Ill_GATKHC_15148:HG4_PB_SVrefine2Falcon1Dovetail_5674;NumExactMatchSVs=15;ClusterMaxShiftDist=0.206186;ClusterMaxSizeDiff=0.206186;ClusterMaxEditDist=0.262295;PBcalls=14;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=94;DistBack=-83;DistForward=3361;DistMin=-83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=130;REFWIDENED=8:34099625-34099754;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5334.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:./.:2:20:9:18:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr8	34243998	HG3_Ill_GATKHC_15044	C	CTTGCTCAAATTAATAAAGAACATGAATGGATGTTCTTTATTAATTTGAGCAAGTTTCCCTCTATTCCTATAATTTAAGAAACTAGGAATAGAGGGAAAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6630:HG2_PB_PB10Xdip_29931:HG2_PB_pbsv_9350:HG4_Ill_svaba_11830:HG4_Ill_manta_2275:HG4_Ill_Krunchall_13183:HG4_Ill_GATKHC_15150:HG4_Ill_GATKHCSBGrefine_6461:HG4_Ill_250bpfermikitraw_12542:HG4_Ill_150bpfermikitraw_12023:HG3_Ill_svaba_11834:HG3_Ill_manta_2165:HG3_Ill_Spiral_9827:HG3_Ill_Krunchall_12579:HG3_Ill_GATKHC_15044:HG3_Ill_GATKHCSBGrefine_6257:HG3_Ill_250bpfermikitraw_12231:HG3_Ill_150bpfermikitraw_11880:HG2_Ill_svaba_11731:HG2_Ill_manta_2655:HG2_Ill_SpiralSDKrefine_16844:HG2_Ill_Krunchall_12917:HG2_Ill_GATKHC_15071:HG2_Ill_GATKHCSBGrefine_6344:HG2_Ill_250bpfermikitraw_12595:HG2_Ill_150bpfermikitraw_11840:HG2_Ill_breakscan11_3950:HG2_PB_HySA_16805:HG4_PB_SVrefine2PBcRDovetail_4633:HG3_PB_pbsv_9113:HG4_PB_SVrefine2Falcon1Dovetail_5675:HG4_PB_pbsv_9375:HG4_Ill_SVrefine2DISCOVARDovetail_6657:HG3_Ill_SVrefine2DISCOVARDovetail_6855:HG2_PB_SVrefine2PBcRplusDovetail_10934:HG2_PB_SVrefine2PB10Xhap12_6842:HG2_PB_SVrefine2Falcon1plusDovetail_11737:HG2_Ill_SVrefine2DISCOVARplusDovetail_12787;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11840:HG2_Ill_250bpfermikitraw_12595:HG2_Ill_GATKHCSBGrefine_6344:HG2_Ill_GATKHC_15071:HG2_Ill_Krunchall_12917:HG2_Ill_SpiralSDKrefine_16844:HG2_Ill_manta_2655:HG2_Ill_svaba_11731:HG3_Ill_150bpfermikitraw_11880:HG3_Ill_250bpfermikitraw_12231:HG3_Ill_GATKHCSBGrefine_6257:HG3_Ill_GATKHC_15044:HG3_Ill_Krunchall_12579:HG3_Ill_Spiral_9827:HG3_Ill_manta_2165:HG3_Ill_svaba_11834:HG4_Ill_150bpfermikitraw_12023:HG4_Ill_250bpfermikitraw_12542:HG4_Ill_GATKHCSBGrefine_6461:HG4_Ill_GATKHC_15150:HG4_Ill_Krunchall_13183:HG4_Ill_manta_2275:HG4_Ill_svaba_11830;NumExactMatchSVs=23;ClusterMaxShiftDist=0.097561;ClusterMaxSizeDiff=0.0682927;ClusterMaxEditDist=0.295238;PBcalls=10;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=99;DistBack=-24;DistForward=-1;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=8:34243981-34244022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:1/1:1:20:0:15:./.:0:0:0:0:1/1:1:66:./.:.:.:.:.:.
chr8	34301525	HG2_PB_SVrefine2PB10Xhap12_6843	A	AGTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGTCAGGAAATAACAGATGCTGCAGAGGTTGTGGAAAAATAGGAACACTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGAGTGTGGTGATACCTCAAGGATCTAGGACTGGAAATACCATTCAACCCAGCAATCCCATTACTGGGCATTTACCCAAAGGATTATAAACCATTCTACGATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAGAAGCAAAGACTTGGAACCAACCCAGAGGTCTATCAATGATAGACTGGATTAAGAAAATGTGGCACGTATACACCATGGAATACTATGCAGCCATAAAAAGGATGAGTTCATGTCCTTTTTAGGGACATGGATGAAGCTGGAAACCATCATTGTCAGCAAACTATCACAAGATCAGAAAACCAAACACTGCATGTTCTCACTCATAAGTGGGAGTTGGAACAATGAGAACACATGGACACAGGGAGGGGAACATCACAAACTGGGACCTGTTGGGGGTGGGGGGCTAGGGGAAGGATAACATTAGGAGAAATACCTAATGTAGGTGACGGGTTGATGGGTGCAGCAAACCACCAAGGCACGTGTACACCTATGTAACAAAACTGCACGTTCTGCACATGTGACACGGAACTTAAAGTATAATTAAAAAAAAAAATCACTGCAGTTTGTTACTTCCCCTCCATAATTCCCTGAAGTGAAAACATGGTAGGAAAATGTACTCAACAGAAACCTCCACAAACAAACTCAGAGAATTAATTAATTTTGAATTATTAAGGAGTATACAAATATTATCATATATTTATTTCATGTATTATAATATTTAATTAGAAATTTAAGTTGCAGCTAGAGATTTTTTTAATAAGTATTTTTCTATGTACAGGTCCTGAAATTTTTTGTTAATACTGAGCCTTTCAGATTTGCTGCTTCTTTGGCCTTTCACTACATTAAAGTTTCTTTTGAATTATTTCTAAAAATACTCTTATTTTTTATTGTTGAAACTAGACTGGTACTCTTTGTTCCTTTGGATAAGAGACCATGTTCTAGGAGGTAGAATTCTGGAGGATAAGTACACAGTATTAGCAGTATAAATGACTTGCATTTTAATTTTAATACCTGTGATTGTTAGAGAACCCAGGATGCCTGGATTCCTCTGTTCTTTAAGGGATGCCTGGAGACAGGTTCATTTGGGTTCTGGAACTGAGGAGCTCTGGTGCTCTTATTCTAAAATGGTCTTCTTTCTTTCTGTTTTCTGACTTTGAGAAGCATTGTTCTGGTAGCACTCCTACCTCTCCTTTCCACTCCTCTTTTATTTTGTTTAGTTCCTCTACTTAATTTCTACAACTGGGAAACTTTATCATTCATCTTCTCCCTAGTGATACAAGACTGGGCATTTCCACAATTTAAATAATTTAAATAATTTTTATTTATTTTAATATTAAAAAACTCCTTTCTGAATAACTTCAATGATTTGTCTTGCTGTAATGTGACCACAATATATAGTCTCAAGTCTATTTAAAAGAAGAACTGGCCAGGCATGGTGGCCTACCTCTATAATTCCAGCATTTTAGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGAAGTTCAAGATAAGCCTCGGCAATGTTGGGAGACTCTCTCTACAAAAAAATAATAAAAAATAGCCAAGCGTAGCAGCACATGCCTGTAGTCCCAGCTACATGGTAGGCTGAGGTGGGAGGATCATATGAGCCTGGGAAGTCAGGAACAATGCGTTATGATCGTGCCACTCACTCTGTTTTTTTAAAAAAAGACCTGCTGATGATCTATAAAGCATGCATTTTGAGGTTACTTTCTGTTTTTTAGGGACCACTTCGCTCATCAGTGAATTTACTTTACTTCGATATCTCTTTATGACCAAGGCATTTGTGAGACAATAAAAAAGATTAAGTGGTGCAGCCTTTAATCCAAAGTGAGAGCTGAAGAAAAGTTAACTAGCAAGAATTAGGCTCAAACAGGCTTTCTATAACATGTGCCAAATAACTAAACCTTGGACAAATGGACTGTTGTATTGACTAGAAATTGACGTGCGTTAATGGCTTGACGTTACCATAACTCAACTGTAAGACACAATCTTCTTTGATATATTAAGCTTAACTTGACTCAATTTCATTCTAATGTGTATTAAATGTCAAATGTGTTGTCATGTACTATGCTAGTTTCTTCAAATATTAAATTTGATAAGAAATGATTACTATGAAGAAGGAATTTATAGTTTAGTGAGAGATGCTTACAAAACAGGGTTCTTAGTTCAAATAAAGAAGTGTTTTTAAAGTGTACACGAAAAATGATCATGGTTAATTTGCTGGTAGCAAGAAAACAAAAGACATCATGGAAAGATGATCATAATGGGCCTTGGAGGAGTTTTCCAAATTAAAAAAGAAAGAAAAAAACATATTTCTAGATGGTTAGAATAGCATGAAGAAAGAAGTGGAGAAATAAAACTTCGGTATCAATGAGACATTGGTATCAATGAGATTCGGTACAAATGGGGTAGAGATTAGGGGCTGGGAATAAGACAAAACAGGAGAAATGCAGGAAAATGTGAAATAAGATAAAATTGGGGAAAATGTGGGAAAATACAAATGCTTAGTAACTTAAATTTACCTTTTCAAGAATTGGAGGTCAGTGAAAGGTTGTGGATGTAAAAATGATCAGATCTGTGCCTAAAAATTTAATTCTGGAAATAGTGTCGAAATTTAAATGAGAGTCTCAACTGGTACAATAGAGTGAAAATAGAAGGAACATGTTAATATGAACATTTAACTAAATATGGAATTTGGTATATGGCAAGTGGTATATGGTTAGAGGTATGTTTCTTTTGTATATCTTGATGAATTTATTTATTGAGGTCTAAAATACAGGAGAAGGGCCTAATTTAGAGAAGATGTTGAGTTTAATTTTGCCTATAATAAATTCATACTCCATATAGATATTCAGGTGAATATAATCCTTTGTATTTAGATATAGAGCTTAAGAGAGAGATCAGGACTAGAGATTTAAATTTAGAAATAAAAATGTAGAGGATTATTAGGCAGGAGTGATGGCATCCACCTATAATCCCAGCTACTGGGGAGACTAAGGTGGGAGGATAGCTTGAACCCAGGAGTTTGAGGCTGCAGTGAGCTGTGACTGTGCCACTGCACTCCAGTCTGAGTGACAGAGCACGACTCTGTCTTAAAAAATAAAATGTAGATAATATTGGAAACCTGGTATTTGAGGATATTACTCAGAAATGCCTCTGAAGCAACAAGAAAATAGGGCATGGGCAAAATTCTCAAAAGCAACATATTTAAAATTAACAAACTGTCAAAAATTTATATTAGCTTGCCATATTAATTAAATATGCATATTTTAAATTCTTAGAGATAAAAGGTGTATAATTAACAAGTTAGTACAAAGGAAAATTTAGTAATTAAAAAATTGAAAGTCAAGAAAGGAGCAAGGGAAACAAAATAAAAAGAAAGATAGCAGCTATACATCCACACATATCACTAAGTACAGTAAATGCAAATAAAATCAATGCTACAGTTAGATGACAAATATGTCTGCTGCTTGAAATGTAAATTGGTACAATCACTTTGGGATACCCTTTGTCGGTGTCTGCTAAAGTTAAGCATATGTAAGCACTATCATCCTGCAATTGTACTCTTAAGTATATACCTTTAGAAACTAATACAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11738:HG2_PB_pbsv_9352:HG2_PB_PB10Xdip_29932:HG2_PB_HySA_16806:HG4_PB_SVrefine2Falcon1Dovetail_5676:HG2_PB_SVrefine2PB10Xhap12_6843:HG3_Ill_SVrefine2DISCOVARDovetail_6856:HG2_PB_SVrefine2PBcRplusDovetail_10935;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6843;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0437421;ClusterMaxSizeDiff=0.0434893;ClusterMaxEditDist=0.11555;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=3878;DistBack=10070;DistForward=11493;DistMin=10070;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=137;REFWIDENED=8:34301526-34301662;PctSeqSimilarity=0.9997;PctSizeSimilarity=1;PctRecOverlap=0.9959;SizeDiff=0;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=99;MatchId=5336.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:55:0|1:24:0:0:48:./.:0:0:0:0:0/1:20:8:0/1:149:227:.:3877:.
chr8	34791018	HG2_PB_SVrefine2PB10Xhap12_6845	G	GGAGTGCAGTGGTGCTATCATAGCACACTGCAACCTCAAACTCCTGGGTTCTA	20	PASS	ClusterIDs=HG2_Ill_GATKHC_15075:HG3_PB_pbsv_9120:HG4_Ill_GATKHC_15154:HG2_PB_pbsv_9354:HG2_PB_PB10Xdip_29953:HG3_PB_HySA_14025:HG2_PB_HySA_16813:HG4_PB_pbsv_9378:HG4_PB_HySA_13583:HG3_Ill_GATKHC_15053:HG2_PB_SVrefine2PBcRplusDovetail_10937:HG2_PB_SVrefine2PB10Xhap12_6845:HG2_PB_SVrefine2Falcon1plusDovetail_11740:HG2_Ill_SVrefine2DISCOVARplusDovetail_12791;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHC_15075:HG4_Ill_GATKHC_15154:HG3_Ill_GATKHC_15053:HG2_PB_SVrefine2PBcRplusDovetail_10937:HG2_PB_SVrefine2PB10Xhap12_6845:HG2_PB_SVrefine2Falcon1plusDovetail_11740:HG2_Ill_SVrefine2DISCOVARplusDovetail_12791;NumExactMatchSVs=7;ClusterMaxShiftDist=0.11215;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.303571;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=43075;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=105;REFWIDENED=8:34791019-34791123;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5337.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:41:./.:0:5:6:11:./.:0:0:0:0:0/1:3:19:./.:.:.:.:.:.
chr8	35069022	HG2_Ill_MetaSV_5037	C	CAAAAGAGTAACTCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3951:HG3_PB_pbsv_9122:HG2_PB_pbsv_9355:HG4_PB_assemblyticsfalcon_25783:HG2_PB_assemblyticsPBcR_25541:HG2_PB_assemblyticsfalcon_26350:HG2_PB_HySA_16817:HG4_PB_pbsv_9380:HG4_PB_HySA_13588:HG3_PB_HySA_14029:HG2_PB_PB10Xdip_29955:HG2_PB_PB10Xdip_29954:HG4_PB_SVrefine2Falcon1Dovetail_5679:HG4_PB_SVrefine2PBcRDovetail_4635:HG4_Ill_MetaSV_5275:HG4_Ill_GATKHCSBGrefine_6467:HG3_PB_SVrefine2PBcRDovetail_4203:HG3_Ill_MetaSV_5215:HG3_Ill_GATKHCSBGrefine_6267:HG2_PB_SVrefine2PBcRplusDovetail_10938:HG2_PB_SVrefine2PB10Xhap12_6846:HG2_Ill_manta_2657:HG2_Ill_MetaSV_5037:HG2_Ill_GATKHCSBGrefine_6349:HG2_PB_SVrefine2Falcon1plusDovetail_11741;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6349:HG2_Ill_MetaSV_5037:HG2_Ill_manta_2657:HG2_PB_SVrefine2PB10Xhap12_6846:HG2_PB_SVrefine2PBcRplusDovetail_10938:HG3_Ill_GATKHCSBGrefine_6267:HG3_Ill_MetaSV_5215:HG3_PB_SVrefine2PBcRDovetail_4203:HG4_Ill_GATKHCSBGrefine_6467:HG4_Ill_MetaSV_5275;NumExactMatchSVs=10;ClusterMaxShiftDist=0.146104;ClusterMaxSizeDiff=0.146104;ClusterMaxEditDist=0.230519;PBcalls=17;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=307;DistBack=82110;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:35069023-35069037;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5338.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:./.:0:1:0:0:./.:0:0:0:0:1/1:0:28:1/1:3:73:.:.:.
chr8	35367011	HG2_PB_SVrefine2PB10Xhap12_6847	T	TCTCCTCTCCTCTCCTCTCCCCTCCCTTCCCCTCTCCCCTCCCCTCCCTTCCCCTCTCCCCTCCCCTGCCTTCCCCTCTCTCCTCCCCTCTCTCCTCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCTCCTCCCCCTTCCCTCCCCTTGCCTCTCCCCTCCCTTCCCCTCTCCCCTCCCCTCCCCTCCCTTCCCCTCTCCCCTCCCCTCCCCTCTCCCCTCCCCTCCCCTCTCCCCTCCCCTGTCCCCTCCCCTCCCCTCTCCCCTCCCCTCTCCTCTCCTTCCCTCCCCTCCCCTCCCATTCCTTCCCCTCCTATTCCTTCCCCTCCCTTTCCCTCCCATTCCTTCCCCTCCCTTTCTCTCCCATTCCTTCCCCTCCCTTTCCCCTACCCCTCCCCTGTCTTCTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6847:HG3_PB_pbsv_9124:HG2_PB_HySA_16825:HG3_PB_HySA_14036:HG4_PB_HySA_13596:HG4_PB_pbsv_9383:HG4_PB_SVrefine2PBcRDovetail_4636:HG2_PB_HySA_16824:HG2_PB_PB10Xdip_29957:HG2_PB_PB10Xdip_29958:HG2_Ill_breakscan11_3953:HG2_PB_assemblyticsfalcon_26355:HG2_PB_assemblyticsPBcR_25546:HG4_PB_assemblyticsfalcon_25789:HG4_PB_SVrefine2Falcon1Dovetail_5680:HG2_PB_pbsv_9358:HG3_PB_SVrefine2PBcRDovetail_4204:HG2_PB_SVrefine2Falcon1plusDovetail_11742:HG2_PB_SVrefine2PBcRplusDovetail_10939;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6847:HG2_PB_SVrefine2PBcRplusDovetail_10939;NumExactMatchSVs=2;ClusterMaxShiftDist=0.297685;ClusterMaxSizeDiff=0.297685;ClusterMaxEditDist=0.327072;PBcalls=18;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=429;DistBack=14034;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=8:35367012-35367040;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9977;PctRecOverlap=0.9861;SizeDiff=-1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=5339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:1:25:0:6:./.:0:0:0:0:1/1:0:17:./.:3:22:.:.:.
chr8	37502918	HG4_Ill_GATKHCSBGrefine_6470	A	AGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCAAGCGGTCAAGAGTTCGAGACCAGCCTTACCAACATGGTGAAACCACGTCTTTACTAAAAATACAAAAATTAGCCAGGCGTAGTGGTACATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGTCGAGATGGAGCCACTGCACTCCAGCCTGGGTGATAGAGTGAGACTCCATCTCAAAAAAAAAAAAACAAAGAAGTCAATAGGAATAAAGATGACTACCCCAAAAGGAAAAAAAATACGTAAAGAACACAAGGTTCTATACAAAGATTTTCCCACTAATTATGATAAAGAAAATCTAGAAACAGTCTGAATCAAAGCAATAAGAATAGTTTTCATTTTAATCTTGGTAGAGTCACATTACATAGTCATTGATAATCATATTTTTCATAATATTTAATGATAAAAGAAAGTGTTCATAATCAAAGAGAAAAAAAGAACTTTCATGATTCCAGTTTTGTTTTGTTTTTACTAAAAAAAAAAAAAAGTCATAAGTAGGAGATAAATAGGTCGAAATTAATGAAAGGCTAGAAGGATATACACCAAAGAGTTAACAGTAGTTCCCTCTGAATGTGGATTAATAATTTTATTTCTCCTTTTGTGTTTTTCTGATTTCTACAATGAGCACATTATTTTCTAATTTAGAAAAAATATACATAATATGCAATACAACAGAAAAGCAAATTCAGGGTTTTACATTCAGTTTCATTAAAATTTAATTCTAACACCAAAATGATAAAAACCTTCACTGAAACAAATTTTCAAAGGTTATTAAAAAACGACTGTTATCTTTCTAAGGCTGTTTCTCCATAACAGCACCCATCTCACTTAATTGTTGACTAGCCTACCTCTGTTCTCAATTACACTTGCAATTCCTTGGAAGCAGGACAGGAATTGAGTCATATCCACTCATGGCACCAGGTGCCATAATAGGCGCTCAATAAATGTTTGCTGTGGCAGGGCGCG	20	PASS	ClusterIDs=HG3_PB_pbsv_9127:HG3_PB_HySA_14049:HG4_PB_pbsv_9387:HG2_PB_PB10Xdip_29972:HG2_PB_pbsv_9363:HG2_Ill_breakscan11_3954:HG2_PB_PB10Xdip_29971:HG4_Ill_MetaSV_5277:HG4_Ill_GATKHCSBGrefine_6470:HG3_Ill_GATKHCSBGrefine_6271:HG2_Ill_MetaSV_5040:HG2_Ill_GATKHCSBGrefine_6354:HG3_Ill_MetaSV_5217:HG2_PB_HySA_16842:HG4_PB_HySA_13603:HG2_PB_SVrefine2Falcon1plusDovetail_11745:HG3_PB_SVrefine2PBcRDovetail_4206:HG4_Ill_SVrefine2DISCOVARDovetail_6669:HG2_PB_SVrefine2PBcRplusDovetail_10942:HG2_Ill_SVrefine2DISCOVARplusDovetail_12797:HG2_10X_SVrefine210Xhap12_6640:HG4_PB_SVrefine2PBcRDovetail_4638:HG4_PB_SVrefine2Falcon1Dovetail_5685:HG3_Ill_SVrefine2DISCOVARDovetail_6870:HG2_PB_SVrefine2PB10Xhap12_6850;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6354:HG2_Ill_MetaSV_5040:HG3_Ill_GATKHCSBGrefine_6271:HG4_Ill_GATKHCSBGrefine_6470:HG4_Ill_MetaSV_5277;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0604651;ClusterMaxSizeDiff=0.0510441;ClusterMaxEditDist=0.20778;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=1057;DistBack=-277;DistForward=6371;DistMin=-277;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=284;REFWIDENED=8:37502912-37503195;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.9991;PctRecOverlap=0.9981;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5340.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:0:16:2:32:./.:0:0:0:0:1/1:0:16:0/1:19:123:.:1066:.
chr8	38366557	HG2_Ill_250bpfermikitraw_12620	T	TATATATATAAATATATATTATATATTATATATTATATATATTATATATAATATTATATATAATATATATAAATATATATTATATATTATATATTATATATATTATATATAATATTATATATA	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_6674:HG3_Ill_250bpfermikitraw_12261:HG4_PB_pbsv_9391:HG2_Ill_250bpfermikitraw_12620:HG2_PB_pbsv_9368:HG4_Ill_250bpfermikitraw_12572:HG4_PB_SVrefine2Falcon1Dovetail_5687;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12620:HG3_Ill_250bpfermikitraw_12261;NumExactMatchSVs=2;ClusterMaxShiftDist=0.177215;ClusterMaxSizeDiff=0.177215;ClusterMaxEditDist=0.317597;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=122;DistBack=-166;DistForward=13819;DistMin=-166;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=274;REFWIDENED=8:38366454-38366727;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:1|0:4:17:21:4:./.:0:0:0:0:0/1:14:8:./.:.:.:.:.:.
chr8	38864060	HG3_Ill_MetaSV_5219	T	TAAAAAGGTATCATAGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCGTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3956:HG3_PB_pbsv_9135:HG2_PB_pbsv_9373:HG4_PB_pbsv_9396:HG3_PB_assemblyticsfalcon_26268:HG3_PB_HySA_14056:HG4_PB_assemblyticsfalcon_25810:HG2_PB_HySA_16859:HG3_PB_SVrefine2PBcRDovetail_4213:HG4_PB_SVrefine2PBcRDovetail_4644:HG4_Ill_manta_2283:HG4_Ill_MetaSV_5279:HG4_Ill_GATKHCSBGrefine_6476:HG3_Ill_MetaSV_5219:HG3_Ill_GATKHCSBGrefine_6278:HG2_PB_SVrefine2PBcRplusDovetail_10950:HG2_PB_SVrefine2PB10Xhap12_6858:HG2_PB_SVrefine2Falcon1plusDovetail_11752:HG2_Ill_MetaSV_5043:HG2_Ill_GATKHCSBGrefine_6359:HG2_10X_SVrefine210Xhap12_6648:HG4_PB_SVrefine2Falcon1Dovetail_5691:HG4_PB_HySA_13615:HG2_PB_PB10Xdip_29983:HG2_PB_PB10Xdip_29982;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6359:HG2_Ill_MetaSV_5043:HG2_PB_SVrefine2Falcon1plusDovetail_11752:HG2_PB_SVrefine2PB10Xhap12_6858:HG2_PB_SVrefine2PBcRplusDovetail_10950:HG3_Ill_GATKHCSBGrefine_6278:HG3_Ill_MetaSV_5219:HG4_Ill_GATKHCSBGrefine_6476:HG4_Ill_MetaSV_5279:HG4_Ill_manta_2283:HG4_PB_SVrefine2PBcRDovetail_4644;NumExactMatchSVs=11;ClusterMaxShiftDist=0.188618;ClusterMaxSizeDiff=0.188618;ClusterMaxEditDist=0.234323;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=313;DistBack=63207;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=8:38864061-38864077;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5342.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:./.:1:6:0:3:./.:0:0:0:0:1/1:0:18:1/1:1:70:.:.:.
chr8	39700477	HG2_PB_HySA_16868	T	TCGGGCGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAAAAAAAAAAATTAGCCGGGCGAGTGGTGGCGGGCGTCTGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCGCGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACCAGCGAGACTCCGTCTCAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAGAGAAGATC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_5280:HG2_PB_HySA_16868:HG2_PB_pbsv_9379:HG4_PB_pbsv_9400;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_16868;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0515021;ClusterMaxSizeDiff=0.0486409;ClusterMaxEditDist=0.169492;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=342;DistBack=4239;DistForward=36802;DistMin=4239;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=8:39700460-39700478;PctSeqSimilarity=0.9861;PctSizeSimilarity=0.9971;PctRecOverlap=0.9446;SizeDiff=1;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=97;MatchId=5343.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:28:./.:8:20:43:2:./.:0:0:0:0:0/1:22:11:0/1:12:19:.:.:.
chr8	40650054	HG2_PB_SVrefine2PB10Xhap12_6867	C	CAGAGGGAGGGAGGGAGGGAAGGGGAGGAGAGGGGAGGGGAGGGAGGAAAGGAAGGAAAGGAATGAAAGGAAGGGAGGGAGGAAGTGAAGGAAGGAAGGAAGGAAAGGGGAGGGGAGGGGAGGGGAGGAGAGGGGAGGAGAGGGGAGAGGAGGAGAGGGGAGGGGAGGAGAGGGGAGGGGAGGGGAGGGAAGGAGAGGGTAGAGGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11759:HG2_PB_SVrefine2PBcRplusDovetail_10958:HG2_PB_PB10Xdip_29991:HG3_PB_pbsv_9142:HG2_PB_pbsv_9385:HG2_PB_SVrefine2PB10Xhap12_6867:HG4_PB_SVrefine2PBcRDovetail_4651:HG3_PB_SVrefine2PBcRDovetail_4216:HG4_PB_SVrefine2Falcon1Dovetail_5697;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6867:HG2_PB_SVrefine2PBcRplusDovetail_10958;NumExactMatchSVs=2;ClusterMaxShiftDist=0.200873;ClusterMaxSizeDiff=0.200873;ClusterMaxEditDist=0.288793;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=207;DistBack=10773;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=228;REFWIDENED=8:40650055-40650282;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.9903;PctRecOverlap=0.4734;SizeDiff=2;StartDistance=-108;EndDistance=-108;GTMatch=1;TruScore=80;MatchId=5345.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:29:1/1:0:28:1:6:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr8	40678181	HG4_PB_SVrefine2Falcon1Dovetail_5698	C	CGTGTATGTGTGTCTATGTGTGTGTGTCTATGTATATGTTTATGTGTGTATGGGTATGTGTGTATGTCTGTGTATGTTTATGTGTGCATTTGTGCATATGCATGTAGGTGTGTTTACGTGTGTGTATGTGCATATGTGTGGGGATTGTCAGGGGTGTATACATGTGTGTATATGTGTATGTGTATATGCGTGTGTGTGGGTGTGTTGGGTGGGTGTATTTACGTGTGCGTATAATTGTGTGTATGTGTGTGTTTATGTGTCTGTGTTTATGTGTGGTGGTGTGTTGTGTGTTTATGTGTGTGATGTGGTGTGCTTTTATGTATGTGTGTAATGGGGTGTTGATGTGTGTATGTGTGTGGGTGTGTTTAACTGTGAGTGTGTATGTGTGTATGTGGGGTGTGGTGGTGTTTATGTATGTCTTTATGTGGGTGTATGTGTGTGTGTTTATGTGTGCATTTGTGTGTATGTGGGTGTTTGTGTGTTTGTGTATATATGTGTTTATGTGTGTGGGGTGTGTGTGTATCTGTGTGTTTATGTGTGTATGTTTGGGGGTTGGGGTGTATGTGTGTTTATGTATATGTATGTGTGTATATGTGTATGTGTATGTGTGTATGTGTGAGTGTGTGTTGGGTGTGTGTGTGTATGTGTGTGTATAAACACATGTGTAGGTGTGTGTTTATGTGTGGAGGTGTGTTTGTGTGTTTATGTGTGTGTATGTGTGTATATGTATATGGGTGTGTTTATGTATGTGTATGTGTAGGTGTGTGTATATGTGTGTGTATGTGTTTTGTTTTGTTTTGTTTTTAGATGGAGTCTCGCTCTGTCGACCAGGCTGGAGTGCAGTGGTGCGAACTCGGCTCACTGCAAGCTCTGCCTCCCAGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATAGTCTCGATCTCCTGACCTCATGATCTTCCCCACCTTGGCCTTCCAAAGTGCTAGATTACAGGTGTGAGCCACTGCGCCAGGCCATGTGTGTATGTTTATGTGTGTGTTTATGTATTTGTGGATGTGGGTGTCTGTGGGTGTTTATGTATGTGTTTATGTGGGTGTATGTGTGTGTGTTTATGTGTGCATTTGTGTGTATGTGGGTGTTTGTGTGTTTGTGTGTGTTTATGTGGGGGGCTGTGTGTATCTGTGTGTGTTATGTGTGTGTGGGGTGATGGGGTGTATGTGTTTATGTGTGTATGTGTATATATGTGTATGTGTGTATGTGTGGGTGTGTGTGTTGGGGTGTATGTGTATGTATAAACACATACGTATGTGTATGTTTACGTGTGTGTATGTGCGGGGAT	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_6894:HG3_PB_pbsv_9143:HG2_PB_pbsv_9386:HG2_PB_PB10Xdip_29992:HG4_PB_pbsv_9406:HG4_PB_SVrefine2PBcRDovetail_4652:HG4_PB_SVrefine2Falcon1Dovetail_5698:HG2_PB_SVrefine2PBcRplusDovetail_10959:HG4_Ill_SVrefine2DISCOVARDovetail_6691:HG2_PB_SVrefine2PB10Xhap12_6868:HG2_Ill_SVrefine2DISCOVARplusDovetail_12823:HG2_PB_SVrefine2Falcon1plusDovetail_11760:HG3_PB_SVrefine2PBcRDovetail_4217;NumClusterSVs=13;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_5698;NumExactMatchSVs=1;ClusterMaxShiftDist=0.050519;ClusterMaxSizeDiff=0.049827;ClusterMaxEditDist=0.170723;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1408;DistBack=11361;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=205;REFWIDENED=8:40678182-40678386;PctSeqSimilarity=0.9841;PctSizeSimilarity=0.9909;PctRecOverlap=0.9268;SizeDiff=-13;StartDistance=-98;EndDistance=-98;GTMatch=0;TruScore=96;MatchId=5346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:47:1/1:2:10:1:23:./.:0:0:0:0:1/1:0:24:1/1:5:253:.:2155:.
chr8	41157096	HG3_Ill_GATKHCSBGrefine_6289	G	GATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGTGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11762:HG4_PB_pbsv_9413:HG3_PB_pbsv_9147:HG2_PB_pbsv_9392:HG2_Ill_breakscan11_3957:HG4_PB_SVrefine2PBcRDovetail_4655:HG4_PB_SVrefine2Falcon1Dovetail_5700:HG4_Ill_manta_2289:HG4_Ill_SVrefine2DISCOVARDovetail_6693:HG4_Ill_MetaSV_5286:HG4_Ill_GATKHCSBGrefine_6488:HG4_Ill_150bpfermikitraw_12078:HG3_Ill_MetaSV_5224:HG3_Ill_GATKHCSBGrefine_6289:HG2_Ill_SVrefine2DISCOVARplusDovetail_12824:HG2_Ill_MetaSV_5050:HG2_Ill_GATKHCSBGrefine_6374:HG2_10X_SVrefine210Xhap12_6659:HG4_PB_HySA_13633:HG2_PB_SVrefine2PBcRplusDovetail_10962:HG4_PB_assemblyticsfalcon_25833:HG3_PB_assemblyticsfalcon_26289:HG3_PB_SVrefine2PBcRDovetail_4219:HG2_PB_HySA_16888;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6659:HG2_Ill_GATKHCSBGrefine_6374:HG2_Ill_MetaSV_5050:HG2_Ill_SVrefine2DISCOVARplusDovetail_12824:HG3_Ill_GATKHCSBGrefine_6289:HG3_Ill_MetaSV_5224:HG4_Ill_150bpfermikitraw_12078:HG4_Ill_GATKHCSBGrefine_6488:HG4_Ill_MetaSV_5286:HG4_Ill_SVrefine2DISCOVARDovetail_6693:HG4_Ill_manta_2289:HG4_PB_SVrefine2Falcon1Dovetail_5700:HG4_PB_SVrefine2PBcRDovetail_4655;NumExactMatchSVs=13;ClusterMaxShiftDist=0.203922;ClusterMaxSizeDiff=0.196078;ClusterMaxEditDist=0.251969;PBcalls=12;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=135;DistBack=-1;DistForward=13602;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=8:41157097-41157106;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5347.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:30:./.:15:9:4:20:./.:0:0:0:0:0/1:7:5:./.:.:.:.:.:.
chr8	41270468	HG2_PB_PB10Xdip_29996	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGACACATTTT	20	PASS	ClusterIDs=HG2_PB_HySA_16891:HG2_PB_PB10Xdip_29996:HG4_PB_pbsv_9416:HG2_PB_SVrefine2PBcRplusDovetail_10964:HG3_PB_pbsv_9150:HG2_PB_pbsv_9395:HG2_Ill_breakscan11_3958:HG3_PB_HySA_14072:HG3_PB_SVrefine2PBcRDovetail_4221:HG2_PB_SVrefine2PB10Xhap12_6871:HG2_PB_SVrefine2Falcon1plusDovetail_11764:HG4_PB_SVrefine2Falcon1Dovetail_5702:HG4_PB_SVrefine2PBcRDovetail_4657:HG2_10X_SVrefine210Xhap12_6661;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_29996:HG2_PB_SVrefine2Falcon1plusDovetail_11764;NumExactMatchSVs=2;ClusterMaxShiftDist=0.15156;ClusterMaxSizeDiff=0.15156;ClusterMaxEditDist=0.261603;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=345;DistBack=-9157;DistForward=0;DistMin=-9157;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=8:41270459-41270468;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9971;PctRecOverlap=0.9683;SizeDiff=-1;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=98;MatchId=5348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:44:1/1:1:13:0:13:./.:0:0:0:0:./.:1:18:1/1:2:96:.:.:.
chr8	42039896	HG2_10X_SVrefine210Xhap12_6666	T	TGTAGTGTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGCGCCCGCCACTACGCCCGGCTATTTTTTGTAGTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3960:HG4_PB_pbsv_9422:HG2_PB_pbsv_9401:HG4_PB_assemblyticsfalcon_25845:HG3_PB_assemblyticsfalcon_26301:HG4_PB_HySA_13644:HG2_PB_assemblyticsfalcon_26423:HG2_PB_SVrefine2PBcRplusDovetail_10969:HG4_PB_SVrefine2Falcon1Dovetail_5706:HG2_PB_SVrefine2Falcon1plusDovetail_11769:HG2_Ill_MetaSV_5054:HG2_Ill_GATKHCSBGrefine_6381:HG2_10X_SVrefine210Xhap12_6666:HG4_Ill_SVrefine2DISCOVARDovetail_6700:HG4_Ill_MetaSV_5289:HG4_Ill_GATKHCSBGrefine_6496:HG4_PB_SVrefine2PBcRDovetail_4660:HG4_PB_HySA_13643:HG2_PB_HySA_16901;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6666:HG2_Ill_GATKHCSBGrefine_6381:HG2_Ill_MetaSV_5054;NumExactMatchSVs=3;ClusterMaxShiftDist=0.103393;ClusterMaxSizeDiff=0.100162;ClusterMaxEditDist=0.188854;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=311;DistBack=-3;DistForward=-1;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=8:42039897-42039906;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5349.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:26:0|1:20:6:1:16:./.:0:0:0:0:0/1:37:14:0/1:7:32:.:.:.
chr8	42377937	HG2_PB_SVrefine2PBcRplusDovetail_10973	A	AGAATTGATATTTTAAAAGCCCGTTACTTGAGGCTGGGGGCGGTGGCTTACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCATGGGGTCAGGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCATCTCCACTGAAAATGTAAAAAATTAGCCGGGCGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAAGGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCACCTCAAAACAAAAAAACAAAAAACAAAAAACAAACCAAAAAAAAAAACCCCATTACTTGAAATATTTTCCCCATCCAAATGTACTGTCTGAGAACGGTAATTATTCCCCACAAGAAAAAGCTCAATAAAACATTAAAAGGGATTCATTAAGAAAAGAAAATAATATTTGAGTACGTGTTGTCTTACAGTATACATAAGACAGGGTTCTATATGTTGGACTCAGCTGCAAATTATACAGAAAGATATTTTAAAACAAGGTGCAATGTATATTATTTATAATGGTTGCCATTAAGAAATGACTGTTTATAAGTGCTGACTGCATTAGCATGTATATTCAAAAAAGCCTAATGTTCCATTTAAAAAAAATTTGATCTAGCAATCACACTCTTCAGCATTTTTCCCACAGAAATGAAAACTTAGGTCCACAGAAAAACCCGTACACAAATGTTCATAGCAACACTATTTGTAAAAACAAAATAACCCAAATGTCCTTCAATGGACAAATGGCTAGGCTGTGGTATACCTGCATCATGGAATACTACTCAGCAGTAAAAAGTAACAAACTGCTGATACTCAGGACTCAATGCATACTCAATACTCAATGGATCTCAAGGGCATTATGCTGAGTGAAAAAAGCCAATCTCAAAAGGTTACAGATTGCATGATTCCATTTATATAGTATTCTCAAAATGAGATCAGATTAGTGGCTACCAGCAGTTAGGGGCTTGCTATAAAGGGGTAGCAAAGGGAAAGCCTTGGGGTGATGAATCGATCCTGTATTTTTTTTCTTCTTGAGACAGGGTCTCCCTCTGCTGCCCAGGCTACAGTACAATGGCACCATCATCGCTCACTGCAGCCTCAACCTCCTGGGCTCAAGTGATGCTCCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGATGCATGCCATCACACCTGGCTGATTTTTGTACTTTTTGTAGAGATGGGGTTTTGCCATGTTGCCCAGACTGGTCTCAAACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCAAAAGGCTGGGATTACAGGTGTGAACCACTATGCCCAGCCAATTCTGTATCTTGATTGTGGTAGTGGTAACACAAATCTACACGTGATCAAATTGTACAGAACTATGGACACGCTTCACCAATGAGTGCATGTAAAACAGGGAAATCTGGGAATAAGCTCTGTGGGTGACTCAGATTTATGGCAATTTTCTGGGTTTTTGGGGAAAACTGAGTAGAGGGTAAACAGGACCTCTCCGTACTACTTTTTTAACTTCCTGTGAGTCTGTAATCATTTAAAAACAAAAAGTTTTTTAAAAGTTTGTGAAGAGGGTTGCCTATTTAGGAGACATAAACCATTTTTCCTAACCTAAGTGAAGGTACAAGCACGTAAAGGGGAAAGATGCAAATGGATGGCTAGAGAGGAGAAGACTGCCAGAATAATAGTGAGCAAGCAGTTATCACGTCCCAGGTACTAGAGCCTATCTCATTTAACTCAACAGACAATCCAATGAGGTGGCTGCTGATAAATATCCTTACTTTTCAGATGAGGACACCGAAGGATGGAGAAGACAAGAAATTCATTCAACTTCAGCTGGTAAATAGCCAAGGTGTCAAAGTTAAGAAAAGTAATACAATTTCAAAGCAAAAAGGGTTAAGAAAAAGCACTACTGGCCAGGCATGGTGGCTCACGCCTGTAATCCTACCACTTTGGGGGGCCGAGGTGGGTGGATCACCTTAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCCACTAAAAATACAAAAACCAGCTGAGTGTGGCAGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCAGGACTCCATCTCAAAAAAAAAAGGTATTATTGTAGCAAAAAGGTTTCTTTTCTCTTCTTTAGAGACTTGTTCTGTCACCCAGGTTGGAGTGTGGTGGTGCGAGCATGGCTCACTACACCCTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5710:HG3_PB_pbsv_9158:HG2_PB_assemblyticsfalcon_26426:HG3_PB_assemblyticsfalcon_26304:HG4_PB_assemblyticsfalcon_25848:HG3_PB_SVrefine2PBcRDovetail_4228:HG2_PB_SVrefine2Falcon1plusDovetail_11773:HG3_Ill_SVrefine2DISCOVARDovetail_6905:HG2_PB_SVrefine2PBcRplusDovetail_10973:HG2_10X_SVrefine210Xhap12_6670:HG4_PB_SVrefine2PBcRDovetail_4663;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6670:HG2_PB_SVrefine2PBcRplusDovetail_10973:HG3_Ill_SVrefine2DISCOVARDovetail_6905;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0574359;ClusterMaxSizeDiff=0.0574359;ClusterMaxEditDist=0.116298;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=2383;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=8:42377938-42377942;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:42:0|1:21:1:0:29:./.:0:0:0:0:0/1:13:4:0/1:89:200:.:2423:.
chr8	42739865	HG3_Ill_SVrefine2DISCOVARDovetail_6906	A	AGATGGAGTTTTGCTTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCTGCTTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGGGTAGGTGGGATTACAGGCACCCACGACCACACCTGGCTAATTTTTGTATTTTGAGTAGAGACGGAGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGGGATCCACCTGCCTCAGTCTCCCAAAGTGTTGGGATTACAGGCGTGAGCGACTGCGCCTGGCAATAATGGAAACTTTTTACTTTGGGCTTCACATCATTCTAGTCTGGAGATGTGGAGAAAAAACTTTTATCATACAAATAATAAATATTCATAGTAGAGAAATCAGAAAATAATAGAAAAATATTTAAAATAAAAATAGCCGGGTGTGGTGGCTCAAGCCTGTCATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATATAAAAAATTAGCCTGGCGCGATGGCGGGCGCCTATAGTCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATGGCATGGTGTGAACCCGGGAGGCGGAGCTTGCAGCGAGCCGACATAGGGCGAAAGAGTGAGACGCCGTCTCAAAAAAAAAAAAAAAAAAAATAGTCTTCGCCGGGCACGGTGGCTCACACCTGTAATCCCAACACTTTGGGAGGCTAGGGCAGGTGGATCCCCTGAGGTCAGGCGAAAGCGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_10975:HG2_PB_HySA_16909:HG4_PB_HySA_13648:HG4_PB_pbsv_9427:HG2_PB_pbsv_9410:HG3_PB_pbsv_9162:HG4_Ill_MetaSV_5292:HG2_Ill_MetaSV_5059:HG3_Ill_MetaSV_5234:HG4_PB_HySA_13647:HG2_PB_PB10Xdip_30003:HG4_Ill_SVrefine2DISCOVARDovetail_6710:HG3_Ill_SVrefine2DISCOVARDovetail_6906:HG2_PB_SVrefine2PB10Xhap12_6881:HG2_Ill_SVrefine2DISCOVARplusDovetail_12843:HG2_10X_SVrefine210Xhap12_6675:HG4_PB_SVrefine2PBcRDovetail_4664:HG4_PB_SVrefine2Falcon1Dovetail_5712:HG3_PB_SVrefine2PBcRDovetail_4231:HG2_PB_SVrefine2Falcon1plusDovetail_11776;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6675:HG2_Ill_SVrefine2DISCOVARplusDovetail_12843:HG2_PB_SVrefine2PB10Xhap12_6881:HG3_Ill_SVrefine2DISCOVARDovetail_6906:HG4_Ill_SVrefine2DISCOVARDovetail_6710;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0430622;ClusterMaxSizeDiff=0.0382775;ClusterMaxEditDist=0.179894;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=821;DistBack=16946;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=274;REFWIDENED=8:42739866-42740139;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9988;PctRecOverlap=0.7832;SizeDiff=1;StartDistance=-178;EndDistance=-178;GTMatch=0;TruScore=92;MatchId=5351.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:11:0:9:./.:0:0:0:0:1/1:0:12:1/1:6:114:.:.:.
chr8	43034905	HG2_PB_assemblyticsfalcon_26433	T	TGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCAGGTGGGGGGATGACCCCCCCACCTCCCTCCCGGGCGGGGCGGCTGGCCGGGCAGAGGGGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4233:HG3_PB_assemblyticsfalcon_26308:HG2_PB_assemblyticsfalcon_26433:HG4_PB_assemblyticsfalcon_25853:HG4_PB_SVrefine2Falcon1Dovetail_5713:HG2_PB_pbsv_9411:HG2_PB_SVrefine2Falcon1plusDovetail_11777:HG3_PB_pbsv_9163:HG4_PB_pbsv_9428;NumClusterSVs=9;ExactMatchIDs=HG2_PB_assemblyticsfalcon_26433;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0717949;ClusterMaxSizeDiff=0.0717949;ClusterMaxEditDist=0.268041;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=97;DistBack=4204;DistForward=1319;DistMin=1319;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=139;REFWIDENED=8:43034767-43034905;PctSeqSimilarity=0.9744;PctSizeSimilarity=0.9798;PctRecOverlap=0.0202;SizeDiff=-2;StartDistance=96;EndDistance=96;GTMatch=0;TruScore=65;MatchId=5352.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:./.:4:2:0:0:./.:0:0:0:0:0/0:11:0:./.:.:.:.:.:.
chr8	43050715	HG2_Ill_GATKHC_15161	G	GGGGGTGGAGGAAGAGGAGGAGGAGGAAGAAGAGAAGGAGGGTGTGGAGGAGGAT	20	PASS	ClusterIDs=HG2_Ill_GATKHC_15161:HG2_PB_pbsv_9412:HG2_PB_HySA_16911:HG3_PB_pbsv_9164:HG3_Ill_GATKHC_15137;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_GATKHC_15161:HG3_Ill_GATKHC_15137;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.252252;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=-84;DistForward=82;DistMin=-84;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=79;REFWIDENED=8:43050714-43050795;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5353.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:20:./.:8:10:8:7:./.:0:0:0:0:0/1:11:9:./.:.:.:.:.:.
chr8	47900605	HG4_Ill_250bpfermikitraw_12634	T	TATATAATATATCCTATTATATATAGGACGTATAATATATATAATATATCCTATTATATATAGGACGTATAATAC	20	PASS	ClusterIDs=HG3_PB_HySA_14096:HG2_PB_pbsv_9416:HG2_PB_HySA_16921:HG4_Ill_GATKHC_15241:HG4_Ill_GATKHCSBGrefine_6507:HG4_Ill_250bpfermikitraw_12634:HG4_Ill_150bpfermikitraw_12104:HG3_Ill_GATKHC_15147:HG3_Ill_GATKHCSBGrefine_6307:HG2_PB_assemblyticsPBcR_25635:HG2_Ill_GATKHC_15166;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHC_15166:HG2_PB_assemblyticsPBcR_25635:HG3_Ill_GATKHCSBGrefine_6307:HG3_Ill_GATKHC_15147:HG4_Ill_150bpfermikitraw_12104:HG4_Ill_250bpfermikitraw_12634:HG4_Ill_GATKHCSBGrefine_6507:HG4_Ill_GATKHC_15241;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0264901;ClusterMaxSizeDiff=0.013245;ClusterMaxEditDist=0.105263;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=-1;DistForward=121;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=36;REFWIDENED=8:47900604-47900642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5354.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:1/1:2:28:2:23:./.:0:0:0:0:0/1:7:21:./.:.:.:.:.:.
chr8	48676566	HG2_Ill_GATKHCSBGrefine_6392	C	CTGTGTGGTGTGTGTGATGGGGTGTGTGATGTGGCTGTGTGTGTTGGTGTGATGGGGTATGCCGTGTGTGATGGGATGTGGGTGGTGTGGTTGTGTTGTAATAGGATGTGTATGGTGTGTTTTCCCCGTTGCGTGTTATGTGGTTGTGTGTGGTGTGGTGTGTGTGGTGGCGTGAGGAAATGTGTGGTGTGGTTGTGTGTGTGATGGGGTGTGTGGTGTGGTTGTGGTGTGTGTGGTGATGGGGTGTGTGTGGTGTGGTTGCGTGTTGTGTGGTGTGGTTGCGTTGTGTGGTGATGTGATGGGGTGTATTGTGGGTTTGTGGTGTATGATGTGTGTGTGTAGTGTGAGGGTGTGTGTGGTGTGGTTGTGTGTGTTGTGTGATGGGGTGTGTTGTGATGGTGTGGTGTGTGTGGTTGTGTGTGGTGTATGATGGGGTGTGTAGTGTGGTTGTGTGTGGTGTGTGATGGGATGTGTGTGGTGTGTGTTGTGTGTGATGGGG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5707:HG2_Ill_breakscan11_3961:HG4_PB_pbsv_9438:HG4_PB_HySA_13662:HG2_PB_pbsv_9417:HG4_Ill_manta_2299:HG4_Ill_MetaSV_5298:HG4_Ill_GATKHCSBGrefine_6508:HG3_Ill_manta_2184:HG3_Ill_MetaSV_5239:HG3_Ill_GATKHCSBGrefine_6308:HG2_Ill_manta_2676:HG2_Ill_GATKHCSBGrefine_6392:HG2_PB_HySA_16922:HG3_PB_pbsv_9172:HG4_PB_SVrefine2PBcRDovetail_4693:HG4_Ill_SVrefine2DISCOVARDovetail_6719:HG3_Ill_SVrefine2DISCOVARDovetail_6918:HG2_PB_SVrefine2PBcRplusDovetail_10994:HG2_Ill_SVrefine2DISCOVARplusDovetail_12850;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6392:HG2_Ill_manta_2676:HG3_Ill_GATKHCSBGrefine_6308:HG3_Ill_MetaSV_5239:HG3_Ill_manta_2184:HG4_Ill_GATKHCSBGrefine_6508:HG4_Ill_MetaSV_5298:HG4_Ill_manta_2299;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0755082;ClusterMaxSizeDiff=0.0755082;ClusterMaxEditDist=0.268364;PBcalls=8;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=498;DistBack=-42;DistForward=27;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=209;REFWIDENED=8:48676400-48676608;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:0:6:0:10:./.:0:0:0:0:./.:0:4:1/1:1:105:.:.:.
chr8	48893633	HG2_Ill_MetaSV_5063	C	CGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGCCCGGGAGTGAAATTATTTCAAAATACAAGTTTAAAAAATTGAATTATAGTGGCATTTTAAGAGTTTCTTAGATTTAGTAAGCAACGGCAGTTTTTAATAGCATTTCCTAGGCTGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTATAGTCCCAGCTAATCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGATTACGTCTCAAAAAAAAAGTATTTCCTAACTGATGCATAGTAGAGATGGGGTTGCACTATATTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCTGCCTGCCCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5755:HG4_PB_HySA_13663:HG4_PB_pbsv_9439:HG3_PB_HySA_14101:HG2_PB_pbsv_9418:HG2_PB_HySA_16924:HG3_PB_pbsv_9173:HG4_Ill_MetaSV_5299:HG4_Ill_GATKHCSBGrefine_6510:HG3_Ill_MetaSV_5240:HG3_Ill_GATKHCSBGrefine_6309:HG2_Ill_manta_2677:HG2_Ill_SVrefine2DISCOVARplusDovetail_12853:HG2_Ill_MetaSV_5063:HG2_Ill_GATKHCSBGrefine_6393:HG2_PB_SVrefine2Falcon1plusDovetail_11789:HG4_PB_SVrefine2PBcRDovetail_4694:HG4_Ill_SVrefine2DISCOVARDovetail_6721:HG3_PB_SVrefine2PBcRDovetail_4263:HG3_PB_SVrefine2Falcon1Dovetail_5708:HG3_Ill_SVrefine2DISCOVARDovetail_6920:HG2_PB_SVrefine2PBcRplusDovetail_10995:HG2_Ill_SVrefine2DISCOVARplusDovetail_12852:HG2_10X_SVrefine210Xhap12_6684;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6393:HG2_Ill_MetaSV_5063:HG2_Ill_SVrefine2DISCOVARplusDovetail_12853:HG2_Ill_manta_2677:HG3_Ill_GATKHCSBGrefine_6309:HG3_Ill_MetaSV_5240:HG4_Ill_GATKHCSBGrefine_6510:HG4_Ill_MetaSV_5299;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0619872;ClusterMaxSizeDiff=0.0601641;ClusterMaxEditDist=0.259928;PBcalls=12;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=533;DistBack=-46;DistForward=13297;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=119;REFWIDENED=8:48893561-48893679;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5356.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:./.:0:52:0:0:./.:0:0:0:0:1/1:0:22:1/1:3:96:.:.:.
chr8	49086507	HG2_Ill_SVrefine2DISCOVARplusDovetail_12854	A	AGTGGTGTGTGTGTGTGTGTCTGTGTGTCTGTGTGTGTGTGATGTAGTGTAGTGTGTGTGGTGTGGTGTGTGTGTGGGTCAATGCCCAGTTCTTCTCAAAGCCCTTCCTTTCTGAGCTTGCTTTGCAAATCTGAAAATGGAAATTAGAATACGTGTTCTGTGTCCAGCACAGCACGGTTGTGAAGATCAATAAGATAATCTGTGTGGAAGTGCTATATAAACAATCAGCTGTAGTTTACATATGCTACGAAAGTCATCTGAACATTCATTGCCATTTGGCAACATCCCATCCCAGTTTACATCTTCAATTTCCTTTTGTGCTATTTATTTCAAAGGCCAGGGCGGGAAGTGTATCAGTCGTAGAACACGTTCACTTCCCAATCCCTGTGCCTTTGTCTTCTCCTCATTAGGAGACACTGGATTGGACTCTTCATGTTTACTAAGAGGGTCTCTGTAAAGGGCTCCTCTCATTTTGTGGCTTCTGCCTCTCCTCTTCAAAGCTAGGAAATCACTTCAGTGAAGAAATGAATTATGCATCAGTGTGTCAGGGCTAAGGAGAGAGTAAGGGGGCCAGCTCCACACCCCGAAGGGCTTGAGGATTATTTGGGAATTTAGTGTGGAAGTTGTTGGGCTGGATAGGATAAGGGAGGGAGGAAGGTAAGGTTTGGGGTGTGTGTGGTTTGTGTGTGATGTAAGGTGCATGTGAGTGGTGTGTATGTGTATATGTGTGGTGTAGTGTGTGTGAAATATGGTGTGGTGTGTGTTTGTGGTGTGGTATGTGTGGTGTGGTGTATGTGTGGTGTGTGAGTGTGGTGTGTTTGTGTGTGGTATGTGTGTGATATGGTGTGGTGTATGTGTGGTGTGGTGTATGTGTGGTGTTTGTGTGGTATGTGTGTGATATGGCGTGGTGTGTGTGTGGTGTGTGTATGTGATATGTTGTGTATGTGTGGTGTGGTATGTGTGTGGTGTATGTGTGATGTGTTGTGTGGTGTGTGTGTGTGATGTGTGTGTGTGATGTGGTATGTGT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5709:HG2_PB_pbsv_9419:HG3_PB_pbsv_9174:HG2_PB_HySA_16925:HG4_Ill_GATKHCSBGrefine_6511:HG4_Ill_MetaSV_5300:HG3_Ill_MetaSV_5241:HG4_PB_pbsv_9440:HG2_Ill_MetaSV_5064:HG2_PB_assemblyticsfalcon_26444:HG2_PB_SVrefine2Falcon1plusDovetail_11790:HG4_PB_SVrefine2Falcon1Dovetail_5756:HG4_Ill_SVrefine2DISCOVARDovetail_6722:HG3_Ill_SVrefine2DISCOVARDovetail_6923:HG2_PB_SVrefine2PBcRplusDovetail_10996:HG2_Ill_SVrefine2DISCOVARplusDovetail_12854;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12854:HG2_PB_SVrefine2PBcRplusDovetail_10996:HG3_Ill_SVrefine2DISCOVARDovetail_6923:HG4_Ill_SVrefine2DISCOVARDovetail_6722;NumExactMatchSVs=4;ClusterMaxShiftDist=0.200689;ClusterMaxSizeDiff=0.200689;ClusterMaxEditDist=0.272504;PBcalls=9;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=1026;DistBack=45098;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8787;REFWIDENED=8:49095774-49086583;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9923;PctRecOverlap=0.9382;SizeDiff=-8;StartDistance=-60;EndDistance=-60;GTMatch=0;TruScore=97;MatchId=5357.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:1/1:2:28:2:27:./.:0:0:0:0:1/1:0:9:./.:10:124:.:1088:.
chr8	50625963	HG2_PB_SVrefine2PB10Xhap12_6883	A	ATGCCATCTTGTTCAGACAGGATGTCTCCAACGTGGACTTTAGTTTGCATCTCTGTATTTCCTTTTCTTGTAATGATTTTATAGTTTGTCCTAATCATCTTAGATCCTAATCTGGTGCCTTCTAACTGCAGCCTGTGCTTTCTTTCCACAGCCCTTTTCTCTGCTAAAGTCCTTTTTTTGCTTCTGAGTCCTCTCTTCCTTACTTCTTCTCAACAGTGACTCAGTGGATCACCCATTGCTCTTTGTCCAAAAAAAGCTTGTTTTTTTTTTTTTTAGCAAATGTTAAGAACAGATTGAGGTGTGAAGCTTTCAATTCAGTTCCCAGTTTCCGGTTGTATTTCTCTTGGTATTACTCACATAACACTAGTGTTTTTTTTTGTTTTTTTGTTTTTTTTTTTGAGATGGAGTCTCACTCTGCCACCCAGGCTAGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCACCTCACAGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAGGTAGCTGGGACTACAGGCTGCCATGCGCAGCTAATTTTTTTTTTTTTTTGTTATTTAGCTGTTTAATCCTTTATATATGTGAAGTTTTAAAATATGTATGACCTTCCCCTCTGAAATGAGAATAAAATTGGTGGGAAATTTTAACAAAAGAACAGAATAAAGTTCTAGACTATAAACATAAATATTATTGTTTGGCATTACCCCAAAGTTCCCCTTTAAAAAACCAAATAAATGGAAATAATATATATTTGAGTGTTCTGTCTCTACTGTCTTTGAACCAAGGACGCCTCATACTTTATGAGTTTGTTCCACCCTCTTCTAATATATCTGTCAACAGAGCATGGCAACAGTGTTAGAAAATTTAATGTTTCAAAATTTTGAACAAATTAAAAACATGAAATTTATATTTCTCTTACATTTTACTATTCTCTAATGAGGGAAAATGATTTAAATTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTAGTAGAGACGAGGTTTCACTATGTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCTGCCCGCCTCAGCCTCCAAAAGTGCTGGGATTACAGGTGTGAGACACTGCGCCCAGCCCACATAACACTAGTTTTGCCTCTTCTTCTGTTGGTTTCCTCTACCTGCATTTCTTCTGGAGGTAACACCAGGGAAGCCAGGGTTCCAAACATTCACTCATTGGAGGGCTTACTTCTCAATCCTATTGTGTATCAAGGATAAAATGCTCAGTCTTAAATTCCTGAGTTTTCTTCTAGGTTCTTCTTGCTAATTGTTGCTGGGATTGTTGATATTATCTTATTTTTAGGAGATGAAGTCAGTAGAGCAACGTGGTGGGAAAATTGTGCTATGTTTCTCAGAGCATCTGCTTAGAGAAGGTTGTGTCCTATTTTGAATTGTTTTAAGATCTTGCAACTCTATGTCTGTAAAAATGATTTTAAGAACAGAGTCTTACTTTTTTAACTTTTTCTTAGGCAATGTCATGTCATAGTTTGAAGATGGGGATTTTCCATGAGTGAGAGCATGGATAGATTTTATTTCATACCATGCCAATTGTCTAATGATTAATGTCTCTCCATCCCAGATACTGTCATTAGCTTATTCATCATTCTTCATTTACAGAACTAAGAGTTTTCATCTTTGCCATGGGCACAGTAATACAGAAACAAGTTAGAAAAGGTTTCTCTTATATCTATATGTAGATACATTTTGAATTCAACATTTTACTGATTTTATAGTTGTCTGTTTTAAAATTATACTAGCATGCAGTGTTCCATTCTGGATTTAAACAAAGGAAAGTCCATTCTCTTAACGATATAACATACTGTCTCATACTTGAGTGTATGAGTTTGGGATTTAAGTAGCAATATCTTCTTCTTTTCTTCCTCTTCTATTTCAAATGTTGATTATGATAATTCCACTTTTACATCCTCTTTTTCTTTCATACTTTAAAAAAAGAGGAGATAGTCTACTGATTGAAACATAAACATAATGAGATATGTGGATTTGAAAGGTTTAATGTGGAGGTGGCATCCTCATGCTACTTTACTTGTTTTAGGTACTTTATGGTCATATTTCTAAGATGACCCTAAACCAACAACAAAAGAATTGGCATCTTTTTGCAAACGCTGAAGAAATTTCACTGTTTCAAATTTAGTCCATGATGATTTTTGTCTTTTACTTCTTCTTTTCTTCTTTTGAACACTACTTTCTGTTTTTTTCTCAAAGCAAGTATTTGACTACTGTCATGTGGCCAGCATAATTCTATGCGTTTGTATGACATATAAATATTAAGGATAAATTTTGTCCTGAGAAACTTAATACATGTTTATGTAGACAAAGCTAATACTTAAGCATATATTCAAAAACTTTTTTGTTTTTTATGAAGAGTGCATTAGGGAAAAGATAACAGGAAGGTGAATTTGAGTAATGAAAAAAGTCATTAAAGTAGGGTAGAAATGAGCACACCCTCAAAGAATACATAGAATTTTATTTGTACATTAATTTCACATATTTTTTGAAACAGAGTCTCTTTGAAACTGTTGCCCAGGCTGTAATGCAGTGATGTGATCATGGCTCACTGCAGCCTCAACCTCCTGGGATGAAGTAATCCTCCCACCTCAGCCTCCTAAGTATCTGGGACTATGGGTCCATTTCACCATGCCCAGTTATTATTATTATTATTATTATTATTATTATTATTAGAGATGGAGTCTCACTATGTGCCTAGTCTGGTCTCAAACTCCTGGGCTGAAGTGATCCTTCCACACTGGCCTCATAATGTGCTCTGATTACAGGCATGAGCCACCATGTCTAACCCACATTTTCTTTTAAATACCAACTATTGAATTATTTGGCAGAGTCTAACTGGTAAAGACTGAATATACAATGGTGAAAAACATAGTAGGGTCAAAGTTTTATAATGAAGACAACTATCT	20	PASS	ClusterIDs=HG4_PB_pbsv_9443:HG3_PB_pbsv_9179:HG4_PB_HySA_13673:HG2_Ill_breakscan11_3962:HG2_PB_PB10Xdip_30089:HG4_PB_SVrefine2PBcRDovetail_4696:HG4_PB_SVrefine2Falcon1Dovetail_5759:HG2_PB_SVrefine2Falcon1plusDovetail_11791:HG2_10X_SVrefine210Xhap12_6688:HG3_PB_SVrefine2Falcon1Dovetail_5712:HG4_Ill_SVrefine2DISCOVARDovetail_6727:HG3_Ill_SVrefine2DISCOVARDovetail_6929:HG2_PB_SVrefine2PBcRplusDovetail_10997:HG2_PB_SVrefine2PB10Xhap12_6883:HG2_Ill_SVrefine2DISCOVARplusDovetail_12859:HG2_PB_pbsv_9421;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12859:HG2_PB_SVrefine2PB10Xhap12_6883:HG2_PB_SVrefine2PBcRplusDovetail_10997:HG3_Ill_SVrefine2DISCOVARDovetail_6929;NumExactMatchSVs=4;ClusterMaxShiftDist=0.101433;ClusterMaxSizeDiff=0.101433;ClusterMaxEditDist=0.194704;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=2964;DistBack=7745;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=8:50625964-50625964;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:84:1/1:0:5:0:6:./.:0:0:0:0:1/1:0:43:1/1:6:382:.:2986:.
chr8	50680533	HG2_PB_SVrefine2PBcRplusDovetail_10998	A	AACGCACACCACACACACAAAGATACACACACCATTCATATACCACACACACACTACATATAGACACAAACTACACACGTTCCCCCCACACCATACATAGACACACACATACATACATTCACCACATACACACACACACAACACACACAAATCACACCCCCCACATACAAAAAAAACACACACATACCCCCACACCACACCCAGACACAAACACACACCAAACACACAAACATACACACATCATGCATATAACACACACAACACACACTACATATATATACAAACCACACACATTCCCCTCACACTACATACAGACACACATACATACATACACCACATATAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4697:HG3_PB_pbsv_9180:HG2_Ill_SVrefine2DISCOVARplusDovetail_12861:HG2_PB_pbsv_9422:HG2_PB_HySA_16937:HG3_Ill_SVrefine2DISCOVARDovetail_6930:HG2_PB_SVrefine2PBcRplusDovetail_10998:HG2_Ill_SVrefine2DISCOVARplusDovetail_12860:HG3_PB_SVrefine2Falcon1Dovetail_5713:HG2_PB_SVrefine2Falcon1plusDovetail_11792:HG4_PB_SVrefine2Falcon1Dovetail_5760:HG4_Ill_SVrefine2DISCOVARDovetail_6728;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12860:HG2_PB_SVrefine2PBcRplusDovetail_10998:HG3_Ill_SVrefine2DISCOVARDovetail_6930;NumExactMatchSVs=3;ClusterMaxShiftDist=0.096181;ClusterMaxSizeDiff=0.0884451;ClusterMaxEditDist=0.195191;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=342;DistBack=18573;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=310;REFWIDENED=8:50680534-50680843;PctSeqSimilarity=0.9696;PctSizeSimilarity=0.9766;PctRecOverlap=0.6327;SizeDiff=8;StartDistance=-122;EndDistance=-122;GTMatch=0;TruScore=85;MatchId=5359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:./.:0:49:1:3:./.:0:0:0:0:1/1:0:14:1/1:1:102:.:.:.
chr8	51392821	HG2_PB_SVrefine2Falcon1plusDovetail_11794	T	TCGTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAATGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11794:HG3_PB_pbsv_9183:HG2_PB_HySA_16945:HG2_PB_pbsv_9424:HG4_PB_pbsv_9446:HG4_PB_SVrefine2Falcon1Dovetail_5762:HG2_PB_assemblyticsfalcon_26460:HG2_PB_SVrefine2PBcRplusDovetail_11000;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11794:HG2_PB_SVrefine2PBcRplusDovetail_11000;NumExactMatchSVs=2;ClusterMaxShiftDist=0.193732;ClusterMaxSizeDiff=0.193732;ClusterMaxEditDist=0.222222;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=339;DistBack=9356;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:51392822-51392837;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9912;PctRecOverlap=0.9883;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:0|1:29:6:2:13:./.:0:0:0:0:0/1:23:6:0/1:4:17:.:.:.
chr8	51442456	HG2_Ill_MetaSV_5066	A	ACAAAATAATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_5305:HG2_PB_pbsv_9425:HG3_PB_pbsv_9184:HG3_PB_SVrefine2PBcRDovetail_4265:HG2_PB_assemblyticsfalcon_26461:HG2_Ill_breakscan11_3963:HG2_PB_HySA_16946:HG3_PB_HySA_14114:HG2_PB_SVrefine2Falcon1plusDovetail_11795:HG3_Ill_GATKHCSBGrefine_6313:HG2_Ill_MetaSV_5066:HG4_PB_SVrefine2Falcon1Dovetail_5763:HG3_PB_SVrefine2Falcon1Dovetail_5715;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_MetaSV_5066:HG3_Ill_GATKHCSBGrefine_6313;NumExactMatchSVs=2;ClusterMaxShiftDist=0.130699;ClusterMaxSizeDiff=0.130699;ClusterMaxEditDist=0.206687;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=45687;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:51442457-51442472;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:43:46:0|1:40:0:0:48:./.:0:0:0:0:0/1:27:4:./.:4:31:.:.:.
chr8	51482802	HG2_Ill_GATKHC_15194	T	TTTTATATTTTATTTTATTTTATTTTATTATTTTATTTTATTTTATTTTATTTTATTTTA	20	PASS	ClusterIDs=HG2_PB_pbsv_9426:HG4_Ill_svaba_11916:HG2_PB_HySA_16948:HG2_PB_assemblyticsfalcon_26463:HG4_Ill_manta_2301:HG4_Ill_Krunchall_13282:HG4_Ill_GATKHC_15266:HG4_Ill_GATKHCSBGrefine_6515:HG4_Ill_FB_8222:HG4_Ill_250bpfermikitraw_12651:HG4_Ill_150bpfermikitraw_12123:HG2_Ill_svaba_11818:HG2_Ill_scalpel_8999:HG2_Ill_manta_2680:HG2_Ill_Krunchall_13017:HG2_Ill_GATKHC_15194:HG2_Ill_GATKHCSBGrefine_6395:HG2_Ill_FB_8233:HG2_Ill_250bpfermikitraw_12699:HG2_Ill_150bpfermikitraw_11942:HG4_PB_pbsv_9447;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11942:HG2_Ill_250bpfermikitraw_12699:HG2_Ill_FB_8233:HG2_Ill_GATKHCSBGrefine_6395:HG2_Ill_GATKHC_15194:HG2_Ill_Krunchall_13017:HG2_Ill_manta_2680:HG2_Ill_scalpel_8999:HG2_Ill_svaba_11818:HG4_Ill_150bpfermikitraw_12123:HG4_Ill_250bpfermikitraw_12651:HG4_Ill_FB_8222:HG4_Ill_GATKHCSBGrefine_6515:HG4_Ill_GATKHC_15266:HG4_Ill_Krunchall_13282:HG4_Ill_manta_2301:HG4_Ill_svaba_11916;NumExactMatchSVs=17;ClusterMaxShiftDist=0.123894;ClusterMaxSizeDiff=0.123894;ClusterMaxEditDist=0.232143;PBcalls=4;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=-34;DistForward=74898;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=47;REFWIDENED=8:51482787-51482833;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:23:0|1:31:1:4:20:./.:0:0:0:0:0/1:28:25:./.:.:.:.:.:.
chr8	52609206	HG2_PB_SVrefine2PBcRplusDovetail_11006	T	CGCACATCCACACACAGGTCCACACACATCCACACACACAGGTCCACACACATCCACACACAGGTTCACACACATCCACACACACAGGTCCACACACATACCCACCCACACATAGGTCTTCACAGGTCCACACACATACCCACCCACACATAGGTCTTCACACACACACACACACACACACACACACACAGGTCCTGACACACACACAGGTCCACACACATACACACAGGTCCACACACATACACAGGCCCACACACATACACACACAGGTCCACGCACATCCACACACACCGGTCCACGCACATCCACACACAGGTCCACACACATACACACACATACGTCCACACACATCCACACACACACACACACACACACAGGTCCACACACATCCACACACAGGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11006:HG4_PB_HySA_13688:HG4_PB_pbsv_9452:HG2_PB_HySA_16956:HG4_Ill_MetaSV_5307:HG2_PB_SVrefine2PB10Xhap12_6891:HG2_PB_PB10Xdip_30095:HG3_PB_HySA_14128:HG2_PB_pbsv_9431:HG3_Ill_MetaSV_5249:HG3_PB_pbsv_9190:HG4_PB_SVrefine2Falcon1Dovetail_5767:HG3_PB_SVrefine2Falcon1Dovetail_5721:HG3_PB_SVrefine2PBcRDovetail_4271:HG2_PB_SVrefine2Falcon1plusDovetail_11799:HG4_PB_SVrefine2PBcRDovetail_4702;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_11006:HG4_PB_SVrefine2PBcRDovetail_4702;NumExactMatchSVs=2;ClusterMaxShiftDist=0.154031;ClusterMaxSizeDiff=0.151625;ClusterMaxEditDist=0.261204;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=400;DistBack=52298;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=225;REFWIDENED=8:52609206-52609430;PctSeqSimilarity=0.9525;PctSizeSimilarity=0.9662;PctRecOverlap=0.4434;SizeDiff=-14;StartDistance=-224;EndDistance=-224;GTMatch=0;TruScore=78;MatchId=5363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:28:0:8:./.:0:0:0:0:0/1:3:21:1/1:6:115:.:.:.
chr8	52976794	HG2_Ill_manta_2686	C	CTACTCTCTCTCTCTCTCTATATATATATATATAATCTATCTATCTATATATATAGATTCCATGGTGTGTGTGTGTATATACATATACATATATGCGTATATATGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5770:HG3_Ill_SVrefine2DISCOVARDovetail_6939:HG2_Ill_SVrefine2DISCOVARplusDovetail_12873:HG3_PB_SVrefine2PBcRDovetail_4274:HG3_Ill_svaba_11951:HG3_Ill_manta_2193:HG3_Ill_MetaSV_5251:HG3_Ill_250bpfermikitraw_12360:HG3_Ill_150bpfermikitraw_11995:HG2_Ill_svaba_11833:HG2_Ill_manta_2686:HG2_Ill_MetaSV_5070:HG2_10X_SVrefine210Xhap12_6699:HG3_PB_SVrefine2Falcon1Dovetail_5724:HG2_PB_HySA_16959;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6699:HG2_Ill_MetaSV_5070:HG2_Ill_manta_2686:HG2_Ill_svaba_11833:HG3_Ill_150bpfermikitraw_11995:HG3_Ill_250bpfermikitraw_12360:HG3_Ill_MetaSV_5251:HG3_Ill_manta_2193:HG3_Ill_svaba_11951:HG3_PB_SVrefine2PBcRDovetail_4274;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0966184;PBcalls=4;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=105;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:52976795-52976794;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:36:./.:11:14:9:10:./.:0:0:0:0:0/1:25:20:./.:.:.:.:.:.
chr8	53188721	HG3_Ill_manta_2194	A	ACATACCACATACACACCACACAGGCAAACTACACACCACACACACCAAACACACACCACATACACACACCCTATACATACCACACACACACACAAACCACATGCACACCACACATAGCCCATACACACCACACAGGGAAACTACACACCACATACACCAAACATACCACATACACACACCCCATACATACCACACTCACACACCACATGCACACATACCACACTCACACCATATACCATACATCACACATATACGCCACACACACCACGCACACACACACCACACACACACATCACACATGCAAGCCACACACCACACACATCAAACACACACAACATACCACATGCACACACACCACACATACCACACAGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11802:HG2_PB_pbsv_9435:HG3_PB_pbsv_9194:HG2_PB_PB10Xdip_30152:HG4_PB_pbsv_9455:HG2_PB_PB10Xdip_30151:HG2_Ill_breakscan11_3964:HG4_PB_HySA_13691:HG4_Ill_manta_2306:HG4_Ill_MetaSV_5309:HG4_Ill_GATKHCSBGrefine_6521:HG3_Ill_manta_2194:HG3_Ill_MetaSV_5252:HG3_Ill_GATKHCSBGrefine_6322:HG2_Ill_manta_2687:HG2_Ill_MetaSV_5071:HG2_Ill_GATKHCSBGrefine_6403:HG4_PB_SVrefine2Falcon1Dovetail_5771:HG4_PB_SVrefine2PBcRDovetail_4705:HG4_Ill_SVrefine2DISCOVARDovetail_6739:HG3_PB_SVrefine2PBcRDovetail_4275:HG3_PB_SVrefine2Falcon1Dovetail_5725:HG3_Ill_SVrefine2DISCOVARDovetail_6942:HG2_PB_SVrefine2PBcRplusDovetail_11009:HG2_PB_SVrefine2PB10Xhap12_6894:HG2_Ill_SVrefine2DISCOVARplusDovetail_12876;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6403:HG2_Ill_MetaSV_5071:HG2_Ill_manta_2687:HG3_Ill_GATKHCSBGrefine_6322:HG3_Ill_MetaSV_5252:HG3_Ill_manta_2194:HG4_Ill_GATKHCSBGrefine_6521:HG4_Ill_MetaSV_5309:HG4_Ill_manta_2306;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0732026;ClusterMaxSizeDiff=0.054902;ClusterMaxEditDist=0.253595;PBcalls=13;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=372;DistBack=-101;DistForward=1;DistMin=-101;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=198;REFWIDENED=8:53188607-53188804;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:72:1/1:1:10:1:11:./.:0:0:0:0:1/1:0:22:1/1:1:141:.:.:.
chr8	53865129	HG3_Ill_GATKHCSBGrefine_6325	A	AACCTTGAGCTAGATACTGAGTGCCGATTGGTGTATTTACAATCCCTGAGCTAGACATAAAGGTTCTCCACGTCCTCACCAGAGCAGCTAGATACAGAGTGTCGATTGGTGCACTCACAAACCTTGAGCTAAACACAGGGTGCTGATTTGTGTATTTACAG	20	PASS	ClusterIDs=HG2_PB_HySA_16966:HG2_PB_assemblyticsfalcon_26484:HG3_PB_SVrefine2Falcon1Dovetail_5728:HG2_PB_SVrefine2Falcon1plusDovetail_11804:HG2_PB_pbsv_9437:HG2_PB_PB10Xdip_30155:HG2_PB_SVrefine2PB10Xhap12_6896:HG4_PB_SVrefine2PBcRDovetail_4706:HG4_Ill_GATKHC_15287:HG4_Ill_GATKHCSBGrefine_6523:HG3_Ill_SVrefine2DISCOVARDovetail_6945:HG3_Ill_GATKHCSBGrefine_6325:HG2_Ill_GATKHCSBGrefine_6407;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6407:HG3_Ill_GATKHCSBGrefine_6325:HG3_Ill_SVrefine2DISCOVARDovetail_6945:HG4_Ill_GATKHCSBGrefine_6523:HG4_Ill_GATKHC_15287:HG4_PB_SVrefine2PBcRDovetail_4706;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0617284;ClusterMaxSizeDiff=0.0617284;ClusterMaxEditDist=0.122699;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=160;DistBack=-106;DistForward=24;DistMin=-106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=443;REFWIDENED=8:53864862-53865304;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:0|1:24:0:0:28:./.:0:0:0:0:0/1:17:9:./.:.:.:.:.:.
chr8	54381526	HG4_Ill_GATKHCSBGrefine_6525	G	GCCACCTTTAAGAGCTGTAACATTCACTGTGAAGGTCTGTGGCTTCACTCCTGAAGTCAGTGAGACCACAAACCCACCAGGAGGAAAAAACAATTCCAGACGCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6706:HG3_PB_HySA_14142:HG2_PB_pbsv_9441:HG4_PB_pbsv_9458:HG2_PB_HySA_16975:HG4_PB_SVrefine2Falcon1Dovetail_5776:HG4_Ill_GATKHC_15294:HG4_Ill_GATKHCSBGrefine_6525:HG3_PB_SVrefine2Falcon1Dovetail_5732:HG3_Ill_manta_2197:HG3_Ill_GATKHC_15197:HG3_Ill_GATKHCSBGrefine_6329:HG2_Ill_GATKHC_15219:HG2_Ill_GATKHCSBGrefine_6411:HG3_Ill_SVrefine2DISCOVARDovetail_6953:HG2_Ill_SVrefine2DISCOVARplusDovetail_12883;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6411:HG2_Ill_GATKHC_15219:HG3_Ill_GATKHCSBGrefine_6329:HG3_Ill_GATKHC_15197:HG3_Ill_manta_2197:HG3_PB_SVrefine2Falcon1Dovetail_5732:HG4_Ill_GATKHCSBGrefine_6525:HG4_Ill_GATKHC_15294:HG4_PB_SVrefine2Falcon1Dovetail_5776;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0379147;ClusterMaxSizeDiff=0.028436;ClusterMaxEditDist=0.227488;PBcalls=6;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=103;DistBack=42876;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=191;REFWIDENED=8:54381426-54381616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5368.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:35:0|1:22:2:2:28:./.:0:0:0:0:0/1:23:16:./.:.:.:.:.:.
chr8	54506571	HG3_Ill_MetaSV_5257	C	CACACCACACACCCCATATATACACACAATATGCACATACACCACATACACACCACACACCCCATATATATACACAATACACACACACCACATAGACATCGTATATACACACAATACACACACCACATACACACCGTATATACACACAATACACACACCACATACACAACACACATCACACCAAATATACACAACACACAAGACACATCACACCACATACACACCACACAAGGACAAGACACATCACACACACCATATACACACCACACAAGACACACCACACCAACAACCACAAAAGACACATCATACTACATACACACCACACATACCATATATATACAAAATACACACACATCATATATATATGAAATACACATACCACAAAAGAACAAGACACATCACACACACCATATATACACACACACACTGTATACAAACCACACAAGACATATCAAACCACATACAACACACACCATATATACACACAATACACACACACCATATACACACCACACAAAACACATTACACTGCATACGCACCACACACACCATATATACACACACCACACAGAAGACATACACACCACACAAGACATATCACATTACACACACACCACACACACCATATATACATACAACACATACACACCACACAAGACACATCACACCACACACACACCACACAGACCATATAAACCCACAACACATACACACCACAAAGGACACACCACACTGCATACACACCACATGCCATATATACACACAACACATACAACACATACACATCACACAACACATCACACAAGACACACCACACCACACACACACCACATACACCATATATACACACAATACATACATACTACTCAAGACATATCATACCACATACACACCACACACAGCATATATATACACAATACACACACAATGCATACACACAACACAAGACATATCAT	20	PASS	ClusterIDs=HG3_PB_pbsv_9203:HG2_PB_assemblyticsfalcon_26494:HG4_PB_pbsv_9459:HG2_PB_pbsv_9442:HG3_PB_HySA_14143:HG4_PB_HySA_13701:HG3_PB_SVrefine2Falcon1Dovetail_5733:HG4_PB_SVrefine2PBcRDovetail_4708:HG4_Ill_SVrefine2DISCOVARDovetail_6744:HG4_Ill_MetaSV_5311:HG4_Ill_GATKHCSBGrefine_6526:HG3_PB_SVrefine2PBcRDovetail_4282:HG3_Ill_SVrefine2DISCOVARDovetail_6955:HG3_Ill_MetaSV_5257:HG3_Ill_GATKHCSBGrefine_6330:HG2_PB_SVrefine2PBcRplusDovetail_11013:HG2_PB_SVrefine2PB10Xhap12_6900:HG2_Ill_SVrefine2DISCOVARplusDovetail_12884:HG2_Ill_MetaSV_5076:HG2_Ill_GATKHCSBGrefine_6412:HG4_PB_SVrefine2Falcon1Dovetail_5777:HG2_PB_SVrefine2Falcon1plusDovetail_11807:HG2_PB_PB10Xdip_30159:HG2_Ill_breakscan11_3965;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6412:HG2_Ill_MetaSV_5076:HG2_Ill_SVrefine2DISCOVARplusDovetail_12884:HG2_PB_SVrefine2PB10Xhap12_6900:HG2_PB_SVrefine2PBcRplusDovetail_11013:HG3_Ill_GATKHCSBGrefine_6330:HG3_Ill_MetaSV_5257:HG3_Ill_SVrefine2DISCOVARDovetail_6955:HG3_PB_SVrefine2PBcRDovetail_4282:HG4_Ill_GATKHCSBGrefine_6526:HG4_Ill_MetaSV_5311:HG4_Ill_SVrefine2DISCOVARDovetail_6744:HG4_PB_SVrefine2PBcRDovetail_4708;NumExactMatchSVs=13;ClusterMaxShiftDist=0.101083;ClusterMaxSizeDiff=0.101083;ClusterMaxEditDist=0.210794;PBcalls=14;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=955;DistBack=6;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=8:54506572-54506592;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:./.:0:3:0:1:./.:0:0:0:0:1/1:0:19:1/1:7:197:.:1151:.
chr8	54528738	HG3_Ill_manta_2198	C	CCCAGCAATCCACTCAGACTCCCTTCTCCACTGAGGAGAGCTTTCTTCTTTCACTTATGCAACTTTCGCTCCAGACCCATCCTTGTGTCCATGCTCCTTAATTTTCTTGGACATAGGACAAAGAACTCCAGGTA	20	PASS	ClusterIDs=HG2_PB_pbsv_9443:HG4_Ill_Cortex_3641:HG3_Ill_Cortex_3666:HG2_Ill_Cortex_8866:HG2_PB_assemblyticsfalcon_26495:HG4_PB_HySA_13702:HG3_PB_pbsv_9204:HG4_PB_pbsv_9460:HG4_PB_SVrefine2PBcRDovetail_4709:HG4_Ill_svaba_11935:HG4_Ill_manta_2307:HG4_Ill_MetaSV_5312:HG4_Ill_GATKHCSBGrefine_6527:HG4_Ill_250bpfermikitraw_12674:HG4_Ill_150bpfermikitraw_12144:HG3_PB_SVrefine2PBcRDovetail_4283:HG3_Ill_svaba_11956:HG3_Ill_manta_2198:HG3_Ill_Spiral_9931:HG3_Ill_MetaSV_5258:HG3_Ill_GATKHCSBGrefine_6331:HG2_PB_SVrefine2PBcRplusDovetail_11014:HG2_PB_SVrefine2PB10Xhap12_6901:HG2_PB_SVrefine2Falcon1plusDovetail_11808:HG2_Ill_svaba_11840:HG2_Ill_manta_2690:HG2_Ill_SpiralSDKrefine_16928:HG2_Ill_MetaSV_5077:HG2_Ill_GATKHCSBGrefine_6413:HG2_10X_SVrefine210Xhap12_6708:HG4_PB_SVrefine2Falcon1Dovetail_5778:HG3_PB_SVrefine2Falcon1Dovetail_5734:HG2_PB_PB10Xdip_30160;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6708:HG2_Ill_GATKHCSBGrefine_6413:HG2_Ill_MetaSV_5077:HG2_Ill_SpiralSDKrefine_16928:HG2_Ill_manta_2690:HG2_Ill_svaba_11840:HG2_PB_SVrefine2Falcon1plusDovetail_11808:HG2_PB_SVrefine2PB10Xhap12_6901:HG2_PB_SVrefine2PBcRplusDovetail_11014:HG3_Ill_GATKHCSBGrefine_6331:HG3_Ill_MetaSV_5258:HG3_Ill_Spiral_9931:HG3_Ill_manta_2198:HG3_Ill_svaba_11956:HG3_PB_SVrefine2PBcRDovetail_4283:HG4_Ill_150bpfermikitraw_12144:HG4_Ill_250bpfermikitraw_12674:HG4_Ill_GATKHCSBGrefine_6527:HG4_Ill_MetaSV_5312:HG4_Ill_manta_2307:HG4_Ill_svaba_11935:HG4_PB_SVrefine2PBcRDovetail_4709;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0516605;ClusterMaxSizeDiff=0.0369004;ClusterMaxEditDist=0.202899;PBcalls=13;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=133;DistBack=6806;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=8:54528739-54528739;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5370.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:1:17:1:31:./.:0:0:0:0:1/1:0:25:./.:.:.:.:.:.
chr8	55274037	HG4_Ill_Krunchall_13311	T	TTCTTCCTTCCCTTCTTCCTTCCCTTCTTCCTTCCCTTCTTCCTTCCCTTCTTCCTTCC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12727:HG2_PB_PB10Xdip_30162:HG4_Ill_Krunchall_13311:HG2_Ill_Krunchall_13050;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12727:HG4_Ill_Krunchall_13311:HG2_Ill_Krunchall_13050;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.135593;PBcalls=1;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=8:55274036-55274038;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.9831;PctRecOverlap=0.7627;SizeDiff=-1;StartDistance=-14;EndDistance=-14;GTMatch=1;TruScore=89;MatchId=5371.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:39:1/1:3:20:1:21:./.:0:0:0:0:0/1:13:23:./.:.:.:.:.:.
chr8	55639347	HG4_Ill_GATKHCSBGrefine_6533	T	TGAAAAACAGTAAATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_13708:HG3_PB_assemblyticsfalcon_26390:HG4_PB_pbsv_9469:HG2_PB_pbsv_9452:HG3_PB_SVrefine2Falcon1Dovetail_5739:HG2_PB_HySA_16983:HG2_PB_SVrefine2PB10Xhap12_6905:HG2_Ill_MetaSV_5078:HG4_Ill_MetaSV_5314:HG4_Ill_GATKHCSBGrefine_6533:HG2_Ill_GATKHCSBGrefine_6423:HG2_PB_SVrefine2PBcRplusDovetail_11017:HG2_PB_PB10Xdip_30166:HG2_PB_HySA_16982;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6423:HG4_Ill_GATKHCSBGrefine_6533:HG4_Ill_MetaSV_5314;NumExactMatchSVs=3;ClusterMaxShiftDist=0.191419;ClusterMaxSizeDiff=0.191419;ClusterMaxEditDist=0.256667;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=56203;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:55639348-55639363;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5372.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:44:0|1:31:2:1:36:./.:0:0:0:0:0/1:42:16:0/1:6:33:.:.:.
chr8	56656863	HG2_10X_SVrefine210Xhap12_6714	TTTTTTT	AAAAAACTTCTAAAATATCATCAAAGGAATCCAAAACAGGCAGGCCATATGGAACACGCAGTCATGGATTGTACCAAAAGTTGAAAGTATTGCTTACACATCAAAACACAGAAATACACCCTATCCTACAGGTCACACACACACACACACACACACACACACACACAAAATCACTAGATACTAATTTTTGGAATATTCAACTTTAAAGTAAAAAAAGTAAAAAAAAAAAAATCACAGGTAAAATGAATAAACAAAACTTCTGGAATAATTTCTGATTTGCCATTAAATTCTAAATAAATGAGCCAAGAAAAAATTAGAAGAAATAGGCTGGGCACAGTGGCTCACGCCTGTAATCCCAATACTCTGGAAGACCAAGGCGGGGGGCGGGGGGGGCGTGGATCACCTGAGGTCAGAAGTTCGAGACCAGCCTGGCCAACATGGCAAAACCTTGTCTCTGCTAAAAATACAAAAATTAGCTAGGCATGCTGGCACATGCCTGTAGTCCCAGCTACTCTGGAGGCTGAGGTGGGAGAATCACTTGAAGCTGAGAGGTGGAGGTTGCAGTGAGCCGAAATCATGCCAGCATACTCCAGCCTGGGCAATAGAGAGAGACTCTGTCTCAAAAAAAAAAAAGTAAATAAATAAATAAATAAATAAATCCACACAAAAGTTAAAGATCTCATCAATCTTCCTTTCCACTTTAAATCTGATAAAAAGGGAAAAAAATAAGACTTAAAAAACAATGCAGTACCAACAAAATAGCAATGTTATACATAAAAGAAACAAGGACAGTTTAAAGCTCTTCAGAAGGGGACTTGTAAGTAGATAGGAACATTAACAATAATAGCGCTAGGATAAAAAACAAAACAAAACAAATAATGCCAGGAATATGTAATATAATCAATTAAATATAATACACAAACCATAGGATACAATAACAAGCTGAATACTTCAAAATAAGAAACAGGTATTGCAAAGAAAAAGCACACCTAATCATTAACATTGCTATAATTACATTAAAATCTGATTTTTTAAATCTATAAATAAAGGATAGGTAAAAAGAACTTTCCAGTGTAAATGTATTATGGTACAAAATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11021:HG4_PB_pbsv_9472:HG2_PB_pbsv_9455:HG4_PB_HySA_13712:HG2_PB_SVrefine2Falcon1plusDovetail_11815:HG4_Ill_SVrefine2DISCOVARDovetail_6751:HG2_Ill_SVrefine2DISCOVARplusDovetail_12894:HG2_10X_SVrefine210Xhap12_6714:HG3_PB_SVrefine2Falcon1Dovetail_5741:HG4_PB_SVrefine2Falcon1Dovetail_5782;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6714:HG2_Ill_SVrefine2DISCOVARplusDovetail_12894:HG4_Ill_SVrefine2DISCOVARDovetail_6751;NumExactMatchSVs=3;ClusterMaxShiftDist=0.103131;ClusterMaxSizeDiff=0.103131;ClusterMaxEditDist=0.151013;PBcalls=7;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=1090;DistBack=-1893;DistForward=-7;DistMin=-1893;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:56656870-56656862;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9936;PctRecOverlap=0.9991;SizeDiff=-7;StartDistance=-4;EndDistance=2;GTMatch=0;TruScore=99;MatchId=5373.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:22:0|1:30:0:0:20:./.:0:0:0:0:0/1:12:32:0/1:48:84:.:1013:.
chr8	57984577	HG3_Ill_SVrefine2DISCOVARDovetail_6972	T	TCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGTGGTTCACTCGCGGTTAGGAGCTGGAGACCAGCCTGGCCAACACAGCGAAACCGCGTCTCCACCAAAAAAATAGAAAACCAGTCAGGTGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTTGGCACGGCATCAGAGGGAGACCATGGAAAGAGAGGGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGAGGGAGGGGGGAGGGGGAGGGGGAGAGGGGATCTTTTTTATTTTTAAGGAAATACTAGCTTCTTTGAGGATACACAATTTCTTACAAATTCTGGCAGTACATTCCAGAATGCTCTGATGTTAGGATATCTCTTTATGACAAAGGGCACATCTCATCTCCTTAGTCCTTTATCCCAAGGTAAGGACCTTGGGATGTCATTTTACACCTTGTTCTTTGATGGCTTCAATGTGAGTTGTATTCAGTGGTGCTCAAGCACAGCTGCTGGGCTTCCCTAAGCATGAAACTTGCTTGACTGTCTGCCTGTACCCAGCAATAGAAAAAACACCTCATTCTCCTTTTCCTGCCATCCACAACAAATATCAACAGATGATTCTGCAAATTGTACCAAGAGAACTTGTAACTTGTCCCTGAGTTTAACAGATGCTCACTGATGGCATAAAGAATGGAAGCACATTGCAAAAAATGTTGGGTCAGCAGCTACTCTGGTGCCTCATCCCAGGCACAACTTCGTAGGACTTTTTCCCTATTCTTCTCTTTGTCTGGGTGTCCCAGTTTTGTTTTAACTGTTGTCATTTGACGGGAACCCAGAAGAGACTACAGCAAAGACTACAACAAAACTAACCTATATTTTCGGGTTTTGTCCTAGAGAGTTACATGTGTAGATATATTTGTTGCCTCTACAAAGAGACTAGTTGTTTCACTGCTATGAAATGTAATTCTGCAACTAACACCATGTTAACTTAGCTACTAGAGAGCTGTGAATGGAGACTTGATATATACCAATGGGGTGCCCCTGGTCAGTGAGTTCTAAGAATAAAGGGCGATACTGGATGGAAATGGTCTCTTAAAGAAATTATCCTGTATTTTCAGGCTTATTAAATCTGTTTTGCTTTAAGATGATTATGATTAAAAATTTAAAAAACAGGATATATCAAGAATATACTTTTCAATTACATTCTTGCAGGAACTAAGTTAAAGCACCTATAAATGTGTTCTTTATTAAAAATGTAGTAAATTAAGAAGCAGCATAGGAAAGTGGTAAATAATACGTGTTTTGCATCACACAGAACCTGGGTTTGTGCCTTGGCTTTGCTATGCACCAGCTTTGTGACCTGGCATAATTATTTAACTAAGACTCAAATTCCTCACATGTGAAATAGCAAGAAGAAGAAAAAGAATACCTTTTTCATAGTTTTGATGTCTGGCAAAGAGTAGTTCTCAATAAGTGTTTGTTGTTATTATTATATTTATTAAACATTTAACTAACATTCATTTATTTAAAAAACATTGACTGAGAATCTGTTGTATACCAGACACTCTTCTAGAGGCTGAAGACACAATGGTGAAGGAGATAACAATTGCTATGATTTACTGAGGTTTGACCTTGTGCCTGGTATTGCGCTAAAAGTGTTTTACATGCATTAACACATTTCAAACTCACAACAGCTCATTGGTATGAATATTTGCATTTTTCAGATGAAAAAACTGAGGAAAAAGCTAAATAGCAATAAGGGGTGGAGGCAAAGAAAGCCTGCAGCCTTCAACGTGGTACAAGTTCTAGTGCCTAAGCCAGGTAATGAACAAGTGAACGAATAGGCAAATTCACAGACCAATGGTGGCTATGAACAAAATAAACCTCGGGATAAAGGACTAAGGAGAAGAGAATGGAAAGGGACTGGTGGAAGTGGAGGTCAGGGAGAAACTTAATGTTCATATGTAGCTCATGCTTGCCACAGGGCTTTTACCTGTTCACACTGTTCCCTGCCCTAGAATGCTGTTCCTGCAGACCTCAGCCTGGCATTCTAGGGCAGGGAACAGTGTGAACAGGTAAAAGCCCTGTGGCAAGCATGAGCTACATATGAACATTAAGTTTCTTCCTGAATTTTCTCAAGGCCTCTGTGCCTGCCCTGTTCCCTGCCTCTTTTCCCTTTACCCCTCTATTTGGTTTTATCTCCTTCAAAGTCCTGCATTCTCTGCTCCTCTCATTGCCTTCTCTTGCTTAATTTCCTATCTATCCTGGAGGATGAGCATAAGACAAAAGGATGAGAGAAAAGGAATGGAGGGAAAGCAGAAAAAATGCTAAAGAAAGACTTGGGCTATGACAAACTTCCATGGACGCTGCCTGCTGTCACAAAATAGGTTGGCATTTATGAATCTAGAATTCATCTGTTTCATGTATACACAAAGTGACCCCCAAATGCAGAAGGAGCTGAGAAACCAAAGAATGACAAATTCAGTTTTTCAGCACAGGGTAATTTATTAAGGGTTACTTTCAGACAGAAGCTTGGTATTTGGTGGCCATAAGACAGATCTCCAAACCGCAAACCCCAAACACAGAGCTTATATCTTAGGGAAAGTATATGCACTCTGGATGGAATTTGTAGGTGGCTGAGAGAATGCTGTGGGCATCACAGCCTGTGACCTATGCAATAGCAGCAAGGGTTGTTTTGGAGTAAAGGCAAAACTTACAGTGAAAAGGTATTTCTACATAAACAGTAATACAGATAGTCGTTCTGCCCCCACAACTTCATTACTTGAGACTTATTCATTGGATCTGTACTTCTTTTTACGTGTTACAACTTATTATTTTGGCATATAGATGTAAATAGCAAATACATTTAAATGAATAGATAAGAGAAATGTGGCAATTGTTTTGAAAAGCAGCAACTATAATTTCCCTCCTTGGACAGGTCCAAAGACAGTGCCTGTACATTGATTCTGAGCTGGGGAAGTCTCATTTCTTTTGATCATGGGAACCCTTTCTCCCTATGTGAATAAGCATGAGCTACCCTCCTGTAGGGAGATGTCTTAGCCTCCAACTGCTCCTGCGTTACCAAGGGAGGTCCCAGGTCTCTACATGAGGCCATCCCGGACCCTCTAGCCATTCAGAGAGAAAGTAGAATAGTGAGAAGTAATAAATGTTGGTTTTACGACACTAAGTTTGGGAATGGTTTGTTAGGCAGGAAAAGCTAACTGAGACAAGCAATAGCATTTTCTCTAGATAAAGTCTTGAAAGTAAAGATACTGCCATATTCTAAGTCATAGTCTTAAAACACTGCTTACCTTCTCACCAATGTAACCTGCTCATAATTTTAGTTATAAACTTTTGTAATTGTTGAGAATACAGAAGGGATGCTTATTAAATGTGAAGAGGACAGAAAATTGAGAATGACAGAATTAAGATTTTGGAAAGTCAAAATGATAAGATACATCCAACAAGTTGACATTTATTAATATAAAATATGGAGTTCTATATTTGGGTCTAAAATACCTACAACACAAATACAGCATGGCTTCCTATGTCTGGACTGAGGCATCTGTGGAAAAACACTTAGGGAAAATTCTCTTCCTTGATTAAGAGGAGATGAGGGAAAAACACAAGGAAATACCAAGGTCACCTGTACAACATAATTGGGTGTCATATTAGTTAGAGTTGGCTTACTGTTCCTGTTCTCATAAATTTTGTAATTGCTGACACATAAGAGGGGCCTATTTCTTGCTTGTGTAACACTGATGGAAAGGTAAGCAGATAGGGAGCGTGGTCCTCCTCCATACAGTCCTTGAGAAATCCAGGCTGACAGAGCTCTCCAGCCTTAGCATGAGGCTTTGACACCCCTTTGGGGTCTTCTCTATTTCAGTCATGCAGAGGGAGAAGGTGCATGAATAACACGTATGAGAGATGTTCACATAGCTTTGCATATAGCAAGCATCACTCCCTTTCTCATTCCATGGGCTATAGAACTCAGTCATATGACACTCCAACTTTAAGGGAGGCTATAAACTCTAGTCTAGCTATGTGTTTTGAAAGAAAGGAACATGGAATTTGGTGAGCAGTTAGCCTTCTCCACCCCAACATCTCATAAGTGTGCACACCTGCCCACCATTCCTCTTCATCCTACTCTTCTGATGAACACACTCCTTTACCTGCCCCCAGCTTCCTCACCTTTCATGATCCACTGCCATTAATGACCCTGAGATTACTCAGGTGAGTTGCCAAGAAAAAAATTGCTAACATGCAATGCTGGATATGACTTCAAACAAACTAAAAAGGTCATTCATACCAATATGGTGTCCAGAAGGAGGGAGATGTAAGACTCATTCTTCATTGATTACCTCAAGCATGAAGTATTGCATTCAGTTGTTTGTATCACATGTACACAAGGTTAAGGGAGGACCCAAAAGCATATAATAAGCAGGTAAAATAATTGAAGTTATTTAGGTAAGAACAAAGAAGGATCGTTGGAGAAGCCATGCTTGTCTCTAAATACATTTTTAGAAAAGCTTTTTCTCCCTTTAAAAAAAAAAGAAAAAAGACACTTTTTCCATATTCCCACCACCCAAAGACAAACACTGTTAACACAACTTTATAAAAATAATTCCTTCAGGATTATTTTCGATGCATAATCTTTTAAAAATATTTTTGCATTTTTATCAATCTTTCTAATGTTTGTGTATTTGTCATTTATAAAAACATAAGCATTCACTCATGTTTTTAAAAACTCTTTATAAACACAATTTCCTTACAACACATACTGTTTCACTGTGAAGATATATCACAGCCAATTACTTACCACTGAACATTTAGACTGCTCCCAAATTTCACTATTATAAATATTACTGGAATGCATATGTGTATGCAGAAAGAAGTCTTTCCCAATTCATTTAATTAAAGCACTATCTACAAGCATAAAATTTTCTCATACATACTGCAAATTGCTTTTCAGTATTTTTCTCCCACTGGTAAATGGATAAGAATCTGCATTTCACCAAACCCTGTTAATACTTTAAAAATATTTTCTAGTAGAAAGCGAGAGGAAATTCGTGTTTTGTTTAAGCTCCATTTCTTTGACTATTTGTGAGGTTGAACTGTTGTCCAAGGTTTTTTATCACTTATATGATCACATTCGTTAATTATTTTTTTCATGTAATTTGGCCAACTGTCTACTTGGAGTCCTAGTGACTCCTTTATTGATTTGTATCAAACAATTATAGTAACATTTTAGCATATCTGTCTAGTAATTTTTTCCAGTTTCTTTGCTTTTGTTATTATTCCTCATTATTTCTATAGAAGTTTTAAATTTTAATGCACTCAAAATTATTAAATTCTTCCCTTTTCCACCAATGAGTTTTAGTCTTTGAAAGTTATTTCCACCTCAGAGAGTAAATAAATATAAATTGATATTTTTTCAAGCTTTCTAGAATGCTTTTTGTTGTTGTTCTACTGTTTGTTTTTACATTTAATTTATAAATGAAGCCGTAACAGTATTTTGGAAGTTCTGGGTAAAATAAGGCTTTAAAGTGATTTCCCCAAATAGCTATCTTTAAATATTTAAGTGGATATCACGTGTGCAGATGTGTGTTGGAGAATTAAATTGGCTTTACATAGCTTAAAGAGAGAATTAGAACCACTTGATTAAGTTATAAATTGTTGGCCACATTAAAAAAAAAGAACATTGTTAGTGGTGATAATACTTAAAATATTAGGCTGGGTGTGGTGGCTCATAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5793:HG2_PB_pbsv_9468:HG3_PB_pbsv_9219:HG4_PB_pbsv_9483:HG4_PB_HySA_13724:HG3_PB_SVrefine2Falcon1Dovetail_5749:HG3_PB_SVrefine2PBcRDovetail_4292:HG3_Ill_SVrefine2DISCOVARDovetail_6972:HG4_Ill_SVrefine2DISCOVARDovetail_6765:HG2_PB_SVrefine2PBcRplusDovetail_11029:HG2_PB_SVrefine2Falcon1plusDovetail_11820;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_6972:HG3_PB_SVrefine2PBcRDovetail_4292;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0384485;ClusterMaxSizeDiff=0.0382791;ClusterMaxEditDist=0.171185;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=5798;DistBack=47722;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=87;REFWIDENED=8:57984578-57984664;PctSeqSimilarity=0.9992;PctSizeSimilarity=1;PctRecOverlap=0.9945;SizeDiff=0;StartDistance=-32;EndDistance=-32;GTMatch=0;TruScore=99;MatchId=5375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:./.:0:0:0:0:./.:0:0:0:0:1/1:0:24:1/1:0:468:.:5701:.
chr8	59615977	HG2_Ill_GATKHCSBGrefine_6440	T	TCAAAGTCACAATAGGCAGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3966:HG2_PB_pbsv_9474:HG3_PB_assemblyticsfalcon_26412:HG2_PB_assemblyticsfalcon_26529:HG2_PB_HySA_17015:HG3_PB_pbsv_9228:HG2_PB_HySA_17014:HG2_10X_SVrefine210Xhap12_6730:HG3_PB_SVrefine2PBcRDovetail_4296:HG3_PB_SVrefine2Falcon1Dovetail_5752:HG4_Ill_SVrefine2DISCOVARDovetail_6770:HG4_Ill_MetaSV_5322:HG4_Ill_GATKHCSBGrefine_6552:HG3_Ill_manta_2205:HG3_Ill_SVrefine2DISCOVARDovetail_6979:HG3_Ill_MetaSV_5265:HG3_Ill_GATKHCSBGrefine_6345:HG2_PB_SVrefine2PB10Xhap12_6912:HG2_Ill_manta_2702:HG2_Ill_SVrefine2DISCOVARplusDovetail_12908:HG2_Ill_MetaSV_5088:HG2_Ill_GATKHCSBGrefine_6440:HG2_PB_SVrefine2PBcRplusDovetail_11034:HG2_PB_SVrefine2Falcon1plusDovetail_11826:HG4_PB_SVrefine2Falcon1Dovetail_5796:HG4_PB_pbsv_9489:HG4_PB_HySA_13733:HG3_PB_HySA_14176:HG2_PB_PB10Xdip_30171;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6440:HG2_Ill_MetaSV_5088:HG2_Ill_SVrefine2DISCOVARplusDovetail_12908:HG2_Ill_manta_2702:HG2_PB_SVrefine2PB10Xhap12_6912:HG3_Ill_GATKHCSBGrefine_6345:HG3_Ill_MetaSV_5265:HG3_Ill_SVrefine2DISCOVARDovetail_6979:HG3_Ill_manta_2205:HG4_Ill_GATKHCSBGrefine_6552:HG4_Ill_MetaSV_5322:HG4_Ill_SVrefine2DISCOVARDovetail_6770;NumExactMatchSVs=12;ClusterMaxShiftDist=0.140888;ClusterMaxSizeDiff=0.140888;ClusterMaxEditDist=0.225309;PBcalls=16;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=322;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:59615978-59615990;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:./.:0:1:0:3:./.:0:0:0:0:1/1:0:24:1/1:1:65:.:.:.
chr8	60672193	HG3_Ill_GATKHCSBGrefine_6349	T	TGTGAGGGGCTATGTTGAAGGAGGGAAAGGAGTGAACAAAGGGGTAAACTCAAGAAAGGAAAAAAAAAAAGAAA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12773:HG4_PB_pbsv_9493:HG2_PB_pbsv_9478:HG2_PB_HySA_17023:HG2_PB_SVrefine2PBcRplusDovetail_11035:HG4_PB_HySA_13736:HG4_PB_SVrefine2PBcRDovetail_4716:HG4_Ill_scalpel_8816:HG4_Ill_SVrefine2DISCOVARDovetail_6781:HG4_Ill_GATKHC_15349:HG4_Ill_GATKHCSBGrefine_6557:HG4_Ill_250bpfermikitraw_12718:HG4_Ill_150bpfermikitraw_12194:HG3_Ill_GATKHC_15249:HG3_Ill_GATKHCSBGrefine_6349:HG3_Ill_250bpfermikitraw_12407:HG2_Ill_SVrefine2DISCOVARplusDovetail_12914:HG2_Ill_GATKHC_15279:HG2_Ill_GATKHCSBGrefine_6444;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12773:HG4_PB_SVrefine2PBcRDovetail_4716:HG4_Ill_scalpel_8816:HG4_Ill_SVrefine2DISCOVARDovetail_6781:HG4_Ill_GATKHC_15349:HG4_Ill_GATKHCSBGrefine_6557:HG4_Ill_250bpfermikitraw_12718:HG4_Ill_150bpfermikitraw_12194:HG3_Ill_GATKHC_15249:HG3_Ill_GATKHCSBGrefine_6349:HG3_Ill_250bpfermikitraw_12407:HG2_Ill_SVrefine2DISCOVARplusDovetail_12914:HG2_Ill_GATKHC_15279:HG2_Ill_GATKHCSBGrefine_6444;NumExactMatchSVs=14;ClusterMaxShiftDist=0.12766;ClusterMaxSizeDiff=0.0979021;ClusterMaxEditDist=0.255319;PBcalls=6;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=73;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=73;REFWIDENED=8:60672194-60672266;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5379.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:24:0|1:32:3:3:24:./.:0:0:0:0:0/1:14:12:./.:.:.:.:.:.
chr8	61526779	HG3_Ill_MetaSV_5268	T	TCCAGCCCTGCATTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3967:HG2_PB_pbsv_9481:HG3_PB_pbsv_9233:HG4_PB_pbsv_9497:HG3_PB_assemblyticsfalcon_26425:HG2_PB_assemblyticsfalcon_26540:HG4_Ill_GATKHCSBGrefine_6560:HG4_PB_SVrefine2PBcRDovetail_4719:HG3_Ill_MetaSV_5268:HG3_Ill_GATKHCSBGrefine_6351:HG4_PB_HySA_13742:HG4_PB_SVrefine2Falcon1Dovetail_5801:HG2_PB_SVrefine2Falcon1plusDovetail_11829:HG3_PB_SVrefine2Falcon1Dovetail_5758;NumClusterSVs=14;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_6351:HG3_Ill_MetaSV_5268:HG4_Ill_GATKHCSBGrefine_6560;NumExactMatchSVs=3;ClusterMaxShiftDist=0.185897;ClusterMaxSizeDiff=0.173077;ClusterMaxEditDist=0.24359;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=13002;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=8:61526780-61526797;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5380.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:22:0|1:20:5:0:13:./.:0:0:0:0:0/1:23:14:0/1:11:45:.:.:.
chr8	63015422	HG2_10X_SVrefine210Xhap12_6739	G	GGTGAAGAGAATGAAGCGAACAGATTTTCGTTCATTTTGGTTCTCAGGGTTTATTATAGTTTTTTATTTTTATGGGCTTTGGTGAGGGAGGTAGATGGTAATTTGTATTTAATATTTTTAGTTGGGTGATGAGGAATAGTGTGAGGAGTATGGGGGCAATTATGGTGGGCCATACGGCAGTATTTAGTTGGGGCATTTCACTGTAAAGAGGTGTTGGTTCTCTTAATCTTTAACTTAAAAGGTTAATGCTAAGTTAGCTTTACAGTGGGCTCTAGAGGGGGTAGAGAAGGTGCTATAGGGTAAATACGGGTCCTATTTCAAAGATTTTTAGGGGAATTAATTCTAGGACGATGGGTATAAAACTGTGGTTTGCTCCACAGATTTCAGAGCATTGGCCGTAGTACACCCCTGGTCGTGTAGCAGTGAAAGTGGTTTGGTTCAGGCGTCCGGGAATTGCATCTGTTTTTAGGCCTAATGTGGGAACAGCTCATGAGTGTAAGACATCTTGTGATGTAATTATTATGCGAATGGGGGCTTCAACCGGGAGTACCACTCGATTGTCAACGTCAAGGAGTCGCAGGTCGCCTGGTTCTAGGAATAATGGGGGAAGTATGTAGGAGTTGAAGATTAGTCCACCGTAGTCGGTGTATTCGTAGGTTCAATACCATTGATGGCCAATTGATTTGATGGTAAAGGAGGGGTCGTTGACCTCGTCTGTTATGTAAAGGATGCGTAGGGATGGGAGGGCGATAAGGACTAGGATGATGGCGGGCAGGATAGTTCAGACGGTTTCTATTTCCTGAGCGTCTGAGATGTTAGTATTAGTTAGTTTTGTTGTGAGTGTTAGGAAAAGGGCGTACAGGACTAGGAAGCAGATAAGGAAAATGATTATGAGGGCGTGATCATGAAAGATGATAAGCTCTTCTATGATAGGGGAAGTAGCGTCTTGTAAACCTACTTGCGCTGCATGTGCCATTAAGATATATAGGATTTAGCCTATAACTTAACTTTGACAAAGTTATGAAATGGTTTTTCTAATATCTTTTTGAAAAAGTCATGGAGGCCATGGGGTTGGCTTGAAACCAGCTCTGGGGGGTTCGATTCCTTCCTTTTTTGTCTAGATTTTATGTATACGGGTTCTTCGAATGTGTGGTAGGGTGGGGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGCTCTTCTACTATTAGGACTTTTCGCTTCGAAGCGAAGGCCTCTCAAATCATGAAAATTATTAATACTACTGCTGTTAGAGAAATGAATGAGCCTACAGATGATAGGATGTTTCATGTGGTGTATGCATCGGGGTAGTCCGAGTAGCGTCGGGGCATTCCGGATAGGCCGAGAAAGTGTTGTGGGAAGAAAGTTAGGTTTACGCCGACGAATATGATAGCAAAATGGATTTTGGCGTAGGTTTGGTCTAAGGTGTAGCCTGAGAATAGGGGAAATCA	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_26441:HG2_PB_assemblyticsfalcon_26550:HG2_PB_HySA_17038:HG2_Ill_breakscan11_3968:HG3_Ill_GATKHCSBGrefine_6355:HG2_PB_SVrefine2Falcon1plusDovetail_11832:HG2_PB_SVrefine2PBcRplusDovetail_11042:HG2_Ill_SVrefine2DISCOVARplusDovetail_12920:HG2_10X_SVrefine210Xhap12_6739:HG2_Ill_GATKHCSBGrefine_6449:HG3_PB_SVrefine2PBcRDovetail_4301:HG3_PB_HySA_14192;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6739:HG2_Ill_SVrefine2DISCOVARplusDovetail_12920:HG2_PB_SVrefine2PBcRplusDovetail_11042;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0259309;ClusterMaxSizeDiff=0.025266;ClusterMaxEditDist=0.0683646;PBcalls=7;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=1472;DistBack=9261;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=8:63015423-63015431;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:54:0|1:48:0:0:50:./.:0:0:0:0:0/1:21:16:0/1:59:151:.:.:.
chr8	64004614	HG2_Ill_SVrefine2DISCOVARplusDovetail_12924	C	CATCAATGATAGACTGGATAAAGAAAATGTGATATATATATATACACACATATACACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGATCCTGTCCTTTGCAGGGACATGGATGAATCTGGAAGCCATCAACCTCAGCAAACTAACACAGAAACAGAAAACTGAACACTGCATGTTCTCACTTATAAGTGGGAGTTGAACAATGAGAACACACAGACATGGGGAGGGGAACAACACACACTGGGGCCTTTTGGGGGTTGGGGGGCAAGGGGAAGGAGAGCATTAGGACAAATACCTAATGCATACGGGGCTTAAAACCTAGATGACGGGTTGATAGGTACAGCAAACCACCATGGCACATGTATACCTAGGTAACAAACCTGCACAATCCACGTATGTATCCCAGAACTTAAAGTAAAATAAGAAAGGAAAGGAAAAAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAGGAAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAAGGAGGGAAAAGGAAAGGAAAGGAAGAAAGAAAGATCATGGAACTCAATGCAAAAGAAAGCAGAGCTTTAGACCTGAGAAAAACCTGTCCATAACTCTTGCGACTCCACGAGGAAGACAAAAGACCTTAAAG	20	PASS	ClusterIDs=HG3_PB_pbsv_9243:HG2_PB_HySA_17053:HG3_Ill_GATKHCSBGrefine_6358:HG2_PB_PB10Xdip_30198:HG4_PB_assemblyticsfalcon_25996:HG2_PB_assemblyticsfalcon_26558:HG4_PB_pbsv_9511:HG4_PB_SVrefine2Falcon1Dovetail_5804:HG2_PB_SVrefine2PBcRplusDovetail_11045:HG2_PB_SVrefine2Falcon1plusDovetail_11836:HG2_PB_SVrefine2PB10Xhap12_6922:HG4_PB_SVrefine2PBcRDovetail_4724:HG4_Ill_MetaSV_5327:HG4_Ill_SVrefine2DISCOVARDovetail_6795:HG2_Ill_MetaSV_5093:HG3_Ill_MetaSV_5273:HG3_PB_SVrefine2Falcon1Dovetail_5766:HG3_PB_SVrefine2PBcRDovetail_4304:HG2_10X_SVrefine210Xhap12_6741:HG3_Ill_SVrefine2DISCOVARDovetail_6998:HG2_Ill_SVrefine2DISCOVARplusDovetail_12924:HG4_PB_HySA_13767:HG2_PB_pbsv_9492;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12924:HG3_Ill_SVrefine2DISCOVARDovetail_6998;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0670066;ClusterMaxSizeDiff=0.0655499;ClusterMaxEditDist=0.202568;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=688;DistBack=149831;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=8:64004615-64004615;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:28:0:30:./.:0:0:0:0:1/1:0:33:1/1:6:136:.:.:.
chr8	64362800	HG2_Ill_GATKHC_15315	A	ATATATATATATATATATATATATGTATATATATATATATATATATATATG	20	PASS	ClusterIDs=HG2_PB_pbsv_9495:HG2_Ill_150bpfermikitraw_12037:HG3_Ill_GATKHC_15278:HG3_PB_HySA_14201:HG3_Ill_GATKHCSBGrefine_6360:HG2_PB_assemblyticsfalcon_26563:HG2_Ill_GATKHC_15315:HG2_Ill_GATKHCSBGrefine_6455:HG2_PB_HySA_17057;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6455:HG2_Ill_GATKHC_15315:HG3_Ill_GATKHCSBGrefine_6360:HG3_Ill_GATKHC_15278;NumExactMatchSVs=4;ClusterMaxShiftDist=0.280374;ClusterMaxSizeDiff=0.280374;ClusterMaxEditDist=0.336449;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=8:64362773-64362830;PctSeqSimilarity=0.9273;PctSizeSimilarity=0.8621;PctRecOverlap=0.8644;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=88;MatchId=5383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:39:./.:23:10:14:19:./.:0:0:0:0:0/1:13:11:./.:.:.:.:.:.
chr8	64641656	HG3_Ill_svaba_12020	G	GTGTATATATATGTGTATATATGTATATATATGTGTATATATATGTATATGTA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12806:HG3_PB_pbsv_9248:HG2_PB_PB10Xdip_30199:HG2_PB_HySA_17064:HG3_Ill_svaba_12020:HG3_Ill_GATKHC_15283:HG3_Ill_GATKHCSBGrefine_6361:HG3_Ill_250bpfermikitraw_12438:HG2_Ill_svaba_11906:HG2_Ill_Krunchall_13127:HG2_Ill_GATKHC_15320:HG2_Ill_GATKHCSBGrefine_6456;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12806:HG3_Ill_svaba_12020:HG3_Ill_GATKHC_15283:HG3_Ill_GATKHCSBGrefine_6361:HG3_Ill_250bpfermikitraw_12438:HG2_Ill_svaba_11906:HG2_Ill_Krunchall_13127:HG2_Ill_GATKHC_15320:HG2_Ill_GATKHCSBGrefine_6456;NumExactMatchSVs=9;ClusterMaxShiftDist=0.110092;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.12844;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=12231;DistForward=21;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=263;REFWIDENED=8:64641629-64641891;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5384.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:48:0|1:27:6:4:41:./.:0:0:0:0:0/1:11:17:./.:.:.:.:.:.
chr8	64910217	HG2_PB_SVrefine2PB10Xhap12_6924	G	GTATTTTATATACATATATAAATATGTTTATATTTTATATACATATATAAATATGTTTATATTTTATATACATATATAAATATGTTTATATTTTATATACATATATAAATATGTTTATATTTTATATACATATATAAATATGTTTATATTTTATATACATATATAAATATGTTTATATTTTATATACATATATAAATATGTTTA	10	PASS	ClusterIDs=HG2_PB_pbsv_9497:HG2_PB_SVrefine2Falcon1plusDovetail_11839:HG2_PB_PB10Xdip_30200:HG2_PB_SVrefine2PB10Xhap12_6924:HG2_PB_SVrefine2PBcRplusDovetail_11048;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6924;NumExactMatchSVs=1;ClusterMaxShiftDist=0.248927;ClusterMaxSizeDiff=0.248927;ClusterMaxEditDist=0.25;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=203;DistBack=4878;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=585;REFWIDENED=8:64910218-64910802;PctSeqSimilarity=0.9336;PctSizeSimilarity=0.875;PctRecOverlap=0.8712;SizeDiff=-29;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=89;MatchId=5385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:1/1:5:27:0:6:./.:0:0:0:0:./.:3:0:./.:.:.:.:.:.
chr8	65952775	HG2_Ill_SVrefine2DISCOVARplusDovetail_12933	CTC	AGGACTCTGGAGCAAGGACCATCAGCACTAGTTTTATCAGGTCACACCTTCAGATGCAATAAAGAGCCAAGGTAACCATAGCAACATCAAACTTCCCCACTTGAATGTATGTCCTTCATTTTAGGCCTGTGTCAAGCCTGGGGTCCTTTGTTGATCCAGGACCCCAGAGTGTGATAATAGACTTCTTGTCAGTATGGCATCTGGGGTTTTCACTTAGTTTTTCTGAATTTACAAAATTTAAAATGGGCCACAATTTATACCATACACAAAGCAAGAGTCCAAGCTCTTATTCTGTATGCATGACAGCATTTAGGATGATAGCTTCATTTCTGTGGGATCAGTCTTTTAAATGTCTCCTGAACACATCCATATCACTCCATTTTCATCTGCCAGGCTAGCCTGAGACACCATCATCTCTCACATGCGTCCTTGCAACAACCTTTCTCACAGAGTCTCCTGCTTTTTACTTTTGCATTCCTCCAATCCATTCTCAATACGGGAGCACTCATTTTGAAACAAAATTCCAACCACACCACCCCTTCACTTTGAATTCTT	20	PASS	ClusterIDs=HG3_PB_pbsv_9256:HG2_PB_pbsv_9500:HG4_Ill_Spiral_777:HG3_Ill_Spiral_10000:HG2_Ill_Spiral_668:HG2_PB_assemblyticsfalcon_26569:HG2_PB_SVrefine2Falcon1plusDovetail_11841:HG4_PB_assemblyticsfalcon_26009:HG4_PB_SVrefine2Falcon1Dovetail_5812:HG4_Ill_SVrefine2DISCOVARDovetail_6802:HG4_Ill_Cortex_3657:HG3_PB_assemblyticsfalcon_26468:HG3_PB_SVrefine2PBcRDovetail_4309:HG3_PB_SVrefine2Falcon1Dovetail_5774:HG3_Ill_SVrefine2DISCOVARDovetail_7015:HG3_Ill_Cortex_3684:HG2_Ill_SVrefine2DISCOVARplusDovetail_12933:HG2_Ill_Cortex_8894:HG2_10X_SVrefine210Xhap12_6749:HG3_PB_HySA_14215:HG4_PB_HySA_13777:HG4_Ill_MetaSV_5328:HG3_Ill_MetaSV_5274:HG2_Ill_MetaSV_5094:HG4_PB_pbsv_9518;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6749:HG2_Ill_Cortex_8894:HG2_Ill_SVrefine2DISCOVARplusDovetail_12933:HG3_Ill_Cortex_3684:HG3_Ill_SVrefine2DISCOVARDovetail_7015:HG3_PB_SVrefine2Falcon1Dovetail_5774:HG3_PB_SVrefine2PBcRDovetail_4309:HG3_PB_assemblyticsfalcon_26468:HG4_Ill_Cortex_3657:HG4_Ill_SVrefine2DISCOVARDovetail_6802:HG4_PB_SVrefine2Falcon1Dovetail_5812:HG4_PB_assemblyticsfalcon_26009;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0709849;ClusterMaxSizeDiff=0.0692103;ClusterMaxEditDist=0.190641;PBcalls=12;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=552;DistBack=-3;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:65952778-65952774;PctSeqSimilarity=0.9991;PctSizeSimilarity=1;PctRecOverlap=0.9946;SizeDiff=0;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=99;MatchId=5386.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:./.:35:13:0:17:./.:0:0:0:0:0/1:27:22:0/1:13:32:.:.:.
chr8	66305980	HG2_Ill_150bpfermikitraw_12045	T	TATATATATATCATATATATATATCATATATATATATCATATATATATATCATATATATATATATCATATATATATATATATC	20	PASS	ClusterIDs=HG3_PB_pbsv_9257:HG3_Ill_GATKHC_15292:HG3_Ill_GATKHCSBGrefine_6363:HG2_Ill_GATKHC_15325:HG2_Ill_GATKHCSBGrefine_6458:HG4_Ill_GATKHC_15386:HG4_Ill_GATKHCSBGrefine_6574:HG2_PB_pbsv_9501:HG3_Ill_Spiral_10002:HG2_Ill_SpiralSDKrefine_16980:HG4_PB_assemblyticsfalcon_26011:HG3_Ill_Krunchall_12808:HG3_Ill_250bpfermikitraw_12447:HG3_Ill_150bpfermikitraw_12081:HG2_Ill_Krunchall_13131:HG2_Ill_250bpfermikitraw_12812:HG2_Ill_150bpfermikitraw_12045:HG4_Ill_Krunchall_13387:HG4_Ill_150bpfermikitraw_12230:HG4_PB_pbsv_9519;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12045:HG2_Ill_250bpfermikitraw_12812:HG2_Ill_Krunchall_13131:HG3_Ill_150bpfermikitraw_12081:HG3_Ill_250bpfermikitraw_12447:HG3_Ill_Krunchall_12808;NumExactMatchSVs=6;ClusterMaxShiftDist=0.152047;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.245614;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=82;DistBack=2098;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=8:66305972-66306011;PctSeqSimilarity=0.9901;PctSizeSimilarity=0.9878;PctRecOverlap=0.759;SizeDiff=1;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=91;MatchId=5387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:33:0|1:21:6:6:22:./.:0:0:0:0:0/1:23:20:./.:.:.:.:.:.
chr8	66568204	HG3_Ill_svaba_12030	C	CATATATACATATATATATATGTATATATATATATGTATATATGTATATATATA	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12814:HG4_Ill_GATKHC_15389:HG4_Ill_GATKHCSBGrefine_6576:HG3_Ill_GATKHC_15297:HG3_Ill_GATKHCSBGrefine_6365:HG2_Ill_GATKHC_15327:HG2_Ill_GATKHCSBGrefine_6460:HG3_Ill_Spiral_10004:HG2_Ill_manta_2710:HG4_Ill_svaba_12013:HG4_Ill_150bpfermikitraw_12233:HG3_Ill_svaba_12030:HG3_Ill_150bpfermikitraw_12084:HG2_Ill_svaba_11913:HG2_Ill_Krunchall_13134;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12814:HG4_Ill_svaba_12013:HG4_Ill_150bpfermikitraw_12233:HG3_Ill_svaba_12030:HG3_Ill_150bpfermikitraw_12084:HG2_Ill_svaba_11913:HG2_Ill_Krunchall_13134;NumExactMatchSVs=7;ClusterMaxShiftDist=0.138614;ClusterMaxSizeDiff=0.138614;ClusterMaxEditDist=0.158416;PBcalls=0;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=53;DistBack=17;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=8:66568203-66568205;PctSeqSimilarity=0.982;PctSizeSimilarity=0.9815;PctRecOverlap=0.9636;SizeDiff=-1;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=97;MatchId=5388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:27:./.:4:10:10:4:./.:0:0:0:0:0/1:13:35:./.:.:.:.:.:.
chr8	67028909	HG3_Ill_Cortex_3687	A	ATCTTTGGTAGTATGATTACTGTGATATTTTTTTCCTTAAAATTTTAAACTATTTTCTAAGTTTTCTGAAATAAACATTATTTTTAAATTGGAAATATGGATGACTTTAAAAAAATTAACCGCTAACGTCTACCCAGCACTTCCTATAAGCCGAGCACAGCTATAGGTACTTTACATGTTGTAACTTATT	20	PASS	ClusterIDs=HG2_PB_pbsv_9504:HG3_PB_pbsv_9260:HG2_Ill_breakscan11_3971:HG2_PB_HySA_17078:HG3_Ill_manta_2212:HG3_Ill_Spiral_10005:HG3_Ill_SVrefine2DISCOVARDovetail_7017:HG3_Ill_MetaSV_5275:HG3_Ill_GATKHCSBGrefine_6366:HG3_Ill_Cortex_3687:HG2_Ill_manta_2711:HG2_Ill_SpiralSDKrefine_16985:HG2_Ill_SVrefine2DISCOVARplusDovetail_12937:HG2_Ill_MetaSV_5095:HG2_Ill_GATKHCSBGrefine_6461:HG2_Ill_Cortex_8898:HG2_10X_SVrefine210Xhap12_6752:HG3_PB_HySA_14220;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6752:HG2_Ill_Cortex_8898:HG2_Ill_GATKHCSBGrefine_6461:HG2_Ill_MetaSV_5095:HG2_Ill_SVrefine2DISCOVARplusDovetail_12937:HG2_Ill_SpiralSDKrefine_16985:HG2_Ill_manta_2711:HG3_Ill_Cortex_3687:HG3_Ill_GATKHCSBGrefine_6366:HG3_Ill_MetaSV_5275:HG3_Ill_SVrefine2DISCOVARDovetail_7017:HG3_Ill_Spiral_10005:HG3_Ill_manta_2212;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0954907;ClusterMaxSizeDiff=0.0901857;ClusterMaxEditDist=0.158163;PBcalls=4;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=189;DistBack=15619;DistForward=81318;DistMin=15619;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=8:67028910-67028912;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:23:0|1:41:0:0:26:./.:0:0:0:0:0/1:24:7:./.:.:.:.:.:.
chr8	67381884	HG2_Ill_GATKHCSBGrefine_6464	A	AATGTTTTTTTTTATTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTC	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_26575:HG4_Ill_manta_2324:HG4_PB_assemblyticsfalcon_26012:HG4_PB_HySA_13786:HG2_PB_HySA_17082:HG3_PB_HySA_14223:HG3_Ill_GATKHCSBGrefine_6369:HG2_Ill_GATKHCSBGrefine_6464:HG2_PB_pbsv_9509:HG4_PB_pbsv_9524:HG3_Ill_MetaSV_5276:HG2_Ill_MetaSV_5096:HG2_PB_SVrefine2Falcon1plusDovetail_11845:HG2_10X_SVrefine210Xhap12_6753:HG3_PB_SVrefine2Falcon1Dovetail_5778;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6464:HG3_Ill_GATKHCSBGrefine_6369;NumExactMatchSVs=2;ClusterMaxShiftDist=0.105495;ClusterMaxSizeDiff=0.101099;ClusterMaxEditDist=0.168889;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=215;DistBack=0;DistForward=19103;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=8:67381885-67381885;PctSeqSimilarity=0.9564;PctSizeSimilarity=0.9188;PctRecOverlap=0.9149;SizeDiff=-19;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=93;MatchId=5390.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:21:0|1:36:0:1:27:./.:0:0:0:0:0/1:30:10:./.:.:.:.:.:.
chr8	67684332	HG3_PB_SVrefine2PBcRDovetail_4310	T	TTTTTTTTTTTTTTTTGAGATGGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAAGCTCCGCCTGCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCACCACGTCCAGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTCAAGATATTGAAAATTTTTATTCCTGGTTGGTTGGGGCCTGGGAACTCTAGTAAATAGTTTTAAATTGCCTGGGTGTGGTGGCTCATGCCTGTAATCCAAGCACTTTGGGAGGCTGAGGCCAGCAAATCACTTGAGATCAGGAGTTTGAGATCAGCCTGGCCAACATGGTGAAACCTCACCTCTGCTAAAAATACAAAAATTAGCCAGGCGTGGTAGTGCACTCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGGTTGAGCCTGGGAGGTGGAGGTTGCAGTGAGCCAAGATTGCACCACTGCACTCCAGCCTGAGTGACAGAGCAAGACTCTGTCTCAAAAAACAAACAAACAAACAAACAAAAAAAGTTTAAAGTTTAGTTTTAGAGATAAATATTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11846:HG2_PB_pbsv_9510:HG4_PB_pbsv_9525:HG4_PB_HySA_13787:HG2_PB_HySA_17083:HG4_Ill_MetaSV_5329:HG4_Ill_GATKHCSBGrefine_6579:HG3_Ill_MetaSV_5277:HG3_Ill_GATKHCSBGrefine_6370:HG2_Ill_MetaSV_5097:HG2_Ill_GATKHCSBGrefine_6465:HG2_PB_PB10Xdip_30217:HG3_PB_pbsv_9265:HG4_Ill_SVrefine2DISCOVARDovetail_6805:HG4_PB_assemblyticsfalcon_26014:HG4_PB_SVrefine2PBcRDovetail_4729:HG3_PB_SVrefine2PBcRDovetail_4310:HG3_PB_SVrefine2Falcon1Dovetail_5779:HG3_Ill_SVrefine2DISCOVARDovetail_7019:HG2_PB_SVrefine2PBcRplusDovetail_11051:HG2_PB_SVrefine2PB10Xhap12_6931:HG2_Ill_SVrefine2DISCOVARplusDovetail_12939:HG4_PB_SVrefine2Falcon1Dovetail_5813:HG2_10X_SVrefine210Xhap12_6755:HG2_PB_assemblyticsfalcon_26576;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12939:HG2_PB_SVrefine2PB10Xhap12_6931:HG2_PB_SVrefine2PBcRplusDovetail_11051:HG3_Ill_SVrefine2DISCOVARDovetail_7019:HG3_PB_SVrefine2Falcon1Dovetail_5779:HG3_PB_SVrefine2PBcRDovetail_4310:HG4_PB_SVrefine2PBcRDovetail_4729;NumExactMatchSVs=7;ClusterMaxShiftDist=0.229603;ClusterMaxSizeDiff=0.229603;ClusterMaxEditDist=0.283199;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=708;DistBack=66357;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=8:67684333-67684390;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9986;PctRecOverlap=0.9323;SizeDiff=1;StartDistance=-47;EndDistance=-47;GTMatch=0;TruScore=97;MatchId=5391.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:35:0:7:./.:0:0:0:0:1/1:0:15:1/1:5:110:.:880:.
chr8	68981792	HG2_PB_SVrefine2Falcon1plusDovetail_11848	T	TAGAAATTTTATATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3972:HG3_PB_pbsv_9267:HG2_PB_pbsv_9512:HG2_PB_assemblyticsfalcon_26581:HG4_PB_assemblyticsfalcon_26018:HG2_PB_HySA_17090:HG3_PB_SVrefine2Falcon1Dovetail_5781:HG3_Ill_MetaSV_5279:HG3_PB_SVrefine2PBcRDovetail_4312:HG2_PB_SVrefine2Falcon1plusDovetail_11848:HG4_PB_SVrefine2Falcon1Dovetail_5815:HG3_PB_HySA_14227;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11848:HG3_PB_SVrefine2PBcRDovetail_4312;NumExactMatchSVs=2;ClusterMaxShiftDist=0.13253;ClusterMaxSizeDiff=0.13253;ClusterMaxEditDist=0.214925;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=332;DistBack=43940;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:68981793-68981808;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:29:0|1:20:3:2:31:./.:0:0:0:0:0/1:38:19:0/1:6:25:.:.:.
chr8	70072586	HG2_PB_SVrefine2PB10Xhap12_6934	A	ATGCAGTGAGCTATTATTGTGCCAGTGCACTCCAGCCTGGGTGACAGAGCAAGACACCATTTTAAAAAAGGAAAAAAAGTTCCAGTTATGAAAAATGAATAAGTTCCAGAAATCTGTCATACAACATTGTGCTTATAAATAACAATACTGTATTATACACTTAAAAAGTTGTTAAGCTGATAGATTTCAACGTATGTGTTCTTACAACAATAAAATAGAAAAAAGGAAAAATAAATTAGTTGCCCAACACTCTTCATTATTATTATTGTTATTATTATCATTATTATTTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCACGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACTGTCATGCGCCACCATGCCTGGGTAATATTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCGTGATCCGGCAGCCTCAGCCTCCCAAAGTACTGGGATTACAGGCGTGAGCCACTGCACCCGGTCCCATTATTTTATTTTGTTCATCACATCTACCACTCTCTATTAGAGTACTCTCTAAGAGAAATATAATGCGAAACGCAGAGGTAATTATACAATTTTTAGTAGTCACCTTTTAAAAAGTTAAAAGAGGCGGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTGGGAGGCCGAGGCAGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCTGTCTCTACTAAAAATAAAAAAAATTAGCTGGGCGCGGTGGCGGGCGCCTGTAGTCCCATCTACTCGGGAGGCTGAGGCAGGAGAATGGCTTCAACCTGGGAGGCAGAGCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5817:HG2_PB_pbsv_9515:HG4_PB_pbsv_9530:HG4_PB_HySA_13797:HG2_PB_PB10Xdip_30223:HG3_PB_pbsv_9270:HG3_PB_HySA_14236:HG3_Ill_GATKHCSBGrefine_6373:HG4_Ill_MetaSV_5332:HG4_Ill_GATKHCSBGrefine_6582:HG2_Ill_MetaSV_5099:HG2_Ill_GATKHCSBGrefine_6467:HG3_Ill_MetaSV_5280:HG2_PB_HySA_17099:HG2_PB_assemblyticsfalcon_26586:HG4_PB_assemblyticsfalcon_26026:HG3_PB_SVrefine2PBcRDovetail_4313:HG3_Ill_SVrefine2DISCOVARDovetail_7026:HG2_PB_SVrefine2Falcon1plusDovetail_11850:HG4_PB_SVrefine2PBcRDovetail_4733:HG4_Ill_SVrefine2DISCOVARDovetail_6809:HG2_PB_SVrefine2PBcRplusDovetail_11055:HG2_PB_SVrefine2PB10Xhap12_6934:HG2_Ill_SVrefine2DISCOVARplusDovetail_12943:HG2_10X_SVrefine210Xhap12_6759:HG3_PB_SVrefine2Falcon1Dovetail_5785;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6759:HG2_Ill_SVrefine2DISCOVARplusDovetail_12943:HG2_PB_SVrefine2PB10Xhap12_6934:HG2_PB_SVrefine2PBcRplusDovetail_11055:HG4_Ill_SVrefine2DISCOVARDovetail_6809:HG4_PB_SVrefine2PBcRDovetail_4733;NumExactMatchSVs=6;ClusterMaxShiftDist=0.208568;ClusterMaxSizeDiff=0.208568;ClusterMaxEditDist=0.320317;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=912;DistBack=30774;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=77;REFWIDENED=8:70072587-70072663;PctSeqSimilarity=0.9968;PctSizeSimilarity=1;PctRecOverlap=0.9737;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=99;MatchId=5393.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:0:9:1:14:./.:0:0:0:0:1/1:0:16:./.:15:135:.:.:.
chr8	70935871	HG2_PB_SVrefine2PB10Xhap12_6937	A	ATGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTGTGCCACCACACCCAGCAATTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCGGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTCACAGGATGGTCTCGATCTCCTGACCTCG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6765:HG2_PB_PB10Xdip_30226:HG3_PB_SVrefine2PBcRDovetail_4315:HG3_PB_HySA_14243:HG3_PB_pbsv_9275:HG4_PB_pbsv_9536:HG2_Ill_MetaSV_5101:HG2_PB_HySA_17112:HG4_PB_HySA_13809:HG4_PB_SVrefine2Falcon1Dovetail_5821:HG2_PB_pbsv_9521:HG3_PB_SVrefine2Falcon1Dovetail_5788:HG2_PB_SVrefine2PBcRplusDovetail_11060:HG2_PB_SVrefine2PB10Xhap12_6937:HG4_Ill_SVrefine2DISCOVARDovetail_6817:HG2_PB_SVrefine2Falcon1plusDovetail_11855;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6937:HG2_PB_SVrefine2PBcRplusDovetail_11060;NumExactMatchSVs=2;ClusterMaxShiftDist=0.213425;ClusterMaxSizeDiff=0.213425;ClusterMaxEditDist=0.365517;PBcalls=13;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=305;DistBack=7284;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=77;REFWIDENED=8:70935872-70935948;PctSeqSimilarity=0.9837;PctSizeSimilarity=0.9935;PctRecOverlap=0.7948;SizeDiff=-2;StartDistance=-62;EndDistance=-62;GTMatch=0;TruScore=92;MatchId=5394.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:1/1:3:19:3:20:./.:0:0:0:0:1/1:0:20:1/1:2:21:.:.:.
chr8	71752636	HG2_PB_HySA_17116	A	ATTCAAGACACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTCAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATTACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCGACCCCACCACAGTCCCCAGAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGGTTCCATTCCCACCTATGAGTGAGAATATGCGGTGTTTTGGTTTTTTTGTTCTTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTATATGGCTGCATAGTAATTCCATGGTGTATATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTTGGACATTTGGGTTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAAATGGTATTTTCTAGTTCTAGATACCTGAGGAATCGCCACAACTAAGACTTCCACAATGGTTTGAACTAGTTACAGTCCCACCAAACAGTAAAAAGTGTTCCTATTTTCTCCGCATCCTCTCTCAGCAACCTGTTGTGTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCCAGTGATGATGAGCAATTTCTTCATGTGTTTTTTTGGCTGTGCAATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTTGCAAAAATTTTCTCCCCAGTGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTCTGCTGTGCAGAACTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTTGTCTTTTGTTGCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGAGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTCCCCATTGCTTGTTTTTTCTCAGGTTTGTCCAAAGATCAGATAGTTGTAAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAAGCTTGATGGGGATGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGGATTCTTCCTACCCATAGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCCTCTTTTATTTCTTGAGCAGTGGTTTGTAGTTCTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAAGCTTAAGGAGATTTTGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATAACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTTTCAAAGGGAATGCTTCCAGTTTTTTGCCCATTCAGTATGATATGGCTGTGGGTTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAAGGGTTGTTGAATTTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATATGCTGGATTACATTTATTGATTTGCGTATATTGAAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATCGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGTTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCATCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11858:HG2_PB_assemblyticsfalcon_26601:HG2_PB_HySA_17116:HG2_PB_SVrefine2PBcRplusDovetail_11063;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_17116;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0169673;ClusterMaxSizeDiff=0.0169673;ClusterMaxEditDist=0.0232271;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6115;DistBack=6114;DistForward=52021;DistMin=6114;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:71752637-71752649;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9912;PctRecOverlap=0.9912;SizeDiff=54;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5395.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:59:1|0:1:46:33:0:./.:0:0:0:0:0/1:34:12:0/1:225:529:.:5980:.
chr8	71914578	HG4_Ill_GATKHCSBGrefine_6592	T	TAAAATAAAAGCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAATAAATAAATAAAATAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30230:HG2_PB_pbsv_9524:HG2_PB_assemblyticsfalcon_26602:HG4_Ill_manta_2331:HG4_Ill_MetaSV_5335:HG4_Ill_GATKHCSBGrefine_6592:HG2_PB_SVrefine2PB10Xhap12_6940:HG2_Ill_manta_2716:HG2_Ill_MetaSV_5104:HG2_Ill_GATKHCSBGrefine_6475:HG2_10X_SVrefine210Xhap12_6770:HG4_PB_SVrefine2PBcRDovetail_4739:HG2_PB_SVrefine2Falcon1plusDovetail_11859:HG4_PB_pbsv_9540:HG4_PB_HySA_13813:HG2_Ill_breakscan11_3973;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6770:HG2_Ill_GATKHCSBGrefine_6475:HG2_Ill_MetaSV_5104:HG2_Ill_manta_2716:HG2_PB_SVrefine2PB10Xhap12_6940:HG4_Ill_GATKHCSBGrefine_6592:HG4_Ill_MetaSV_5335:HG4_Ill_manta_2331;NumExactMatchSVs=8;ClusterMaxShiftDist=0.113772;ClusterMaxSizeDiff=0.113772;ClusterMaxEditDist=0.223837;PBcalls=8;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=334;DistBack=-1;DistForward=12;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:71914579-71914591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5396.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:28:0|1:53:1:0:25:./.:0:0:0:0:0/1:31:22:0/1:4:33:.:.:.
chr8	72206041	HG2_PB_pbsv_9525	C	CAAAAAAAACAACTTACAGGCCCCGGGCCGGGGGCTCACGCCTTAATTCCCAGCACTTTGGAGGCCGAGGTGGGCGATCACGGAGGTCAGAGATCGAAACCATCCCCGACTAAAACGGGTTGAACACCCGCTCTAACTAAAAATACAAAAATTAGCGGCCGTAAGTGCGCGGCGCCCTGCCGAGTCCCAGCTACTTGGAGGCTGAGCAGGAGAATGGCGGTGAACCCGGGAGGCGGAGCTTGCAGTGAAGCCGAGGATCCCGCCACTTGACACTCCAGCCTGGGCGACAGAGCGATGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA	20	PASS	ClusterIDs=HG2_PB_pbsv_9525:HG4_PB_HySA_13816:HG4_PB_pbsv_9541:HG3_PB_pbsv_9276:HG3_PB_assemblyticsfalcon_26510:HG4_PB_assemblyticsfalcon_26041:HG2_PB_HySA_17119:HG2_Ill_breakscan11_3974:HG3_PB_SVrefine2Falcon1Dovetail_5791:HG2_PB_SVrefine2PBcRplusDovetail_11064:HG4_PB_SVrefine2Falcon1Dovetail_5823;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_9525;NumExactMatchSVs=1;ClusterMaxShiftDist=0.131298;ClusterMaxSizeDiff=0.131298;ClusterMaxEditDist=0.223242;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=341;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:72206042-72206057;PctSeqSimilarity=0.9436;PctSizeSimilarity=0.9707;PctRecOverlap=0.9707;SizeDiff=10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=5397.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:40:0|1:19:1:0:44:./.:0:0:0:0:0/1:33:7:0/1:10:11:.:.:.
chr8	72399220	HG4_PB_HySA_13818	T	TTTCTCTCTTAAATTTCTTTTTTTTTTTTTTTATTATACTCTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCTCCCCCTCCCCCGACCCACACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATAATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGATGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCACACACCTGTTGTTTCCTGACTTTTTAAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTTCCTTCTCCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTTGAAATACATCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATAACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTCTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTCTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTCGATTTTCTAGTTTATTTGCGTAGAGGTGTTTTGTAGTATTCTCTGATGGTAGTTTGTTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTATTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAAAGGTATATTCTGTTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTCTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCTGCCTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCTATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGAACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCAGTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTTAGAGTTTCCAGTTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCCGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCAGAGGTGGAGCCTTCAGAAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCAGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCCGGGTGGGAGTGACCCGATTTTCCAGGTGCGACCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30232:HG2_PB_pbsv_9527:HG4_PB_pbsv_9543:HG3_PB_pbsv_9277:HG3_PB_SVrefine2PBcRDovetail_4316:HG2_PB_assemblyticsfalcon_26604:HG4_PB_assemblyticsfalcon_26042:HG3_PB_assemblyticsfalcon_26511:HG4_PB_HySA_13818:HG2_PB_HySA_17121:HG2_PB_SVrefine2Falcon1plusDovetail_11860:HG4_PB_SVrefine2Falcon1Dovetail_5824:HG2_10X_SVrefine210Xhap12_6772:HG2_PB_SVrefine2PBcRplusDovetail_11065:HG2_PB_SVrefine2PB10Xhap12_6943:HG3_PB_SVrefine2Falcon1Dovetail_5792:HG2_Ill_breakscan11_3975;NumClusterSVs=17;ExactMatchIDs=HG4_PB_HySA_13818;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0625963;ClusterMaxSizeDiff=0.0624341;ClusterMaxEditDist=0.184467;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=6078;DistBack=38959;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:72399221-72399236;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9942;PctRecOverlap=0.9941;SizeDiff=35;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5398.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:79:./.:0:3:0:0:./.:0:0:0:0:./.:2:19:1/1:1:1077:.:6031:.
chr8	73065375	HG2_Ill_GATKHCSBGrefine_6479	T	TGGTGCGCCGTTTTTTGTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5108:HG2_PB_assemblyticsfalcon_26609:HG4_PB_pbsv_9547:HG2_PB_SVrefine2Falcon1plusDovetail_11864:HG4_Ill_GATKHCSBGrefine_6596:HG2_Ill_GATKHCSBGrefine_6479;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6479:HG4_Ill_GATKHCSBGrefine_6596;NumExactMatchSVs=2;ClusterMaxShiftDist=0.154589;ClusterMaxSizeDiff=0.154589;ClusterMaxEditDist=0.199678;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=311;DistBack=39421;DistForward=1353;DistMin=1353;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:73065376-73065390;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5399.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:17:./.:20:12:3:4:./.:0:0:0:0:0/1:17:5:0/1:5:36:.:.:.
chr8	73763456	HG3_Ill_manta_2216	A	AACTGGCTCTTTCTATGGAATGAACTAGAACCTCTCCAAAGGTGAACTGCAGAAAACTCCACCTCTCCTTATTTCTGCTTCCACGTCG	20	PASS	ClusterIDs=HG3_PB_HySA_14250:HG4_PB_HySA_13826:HG4_PB_SVrefine2Falcon1Dovetail_5827:HG3_Ill_SVrefine2DISCOVARDovetail_7041:HG3_PB_HySA_14251:HG4_PB_assemblyticsfalcon_26047:HG4_Ill_SVrefine2DISCOVARDovetail_6837:HG4_Ill_GATKHC_15435:HG4_Ill_GATKHCSBGrefine_6598:HG4_Ill_250bpfermikitraw_12800:HG3_PB_assemblyticsfalcon_26515:HG3_PB_SVrefine2PBcRDovetail_4318:HG3_PB_SVrefine2Falcon1Dovetail_5795:HG3_Ill_manta_2216:HG3_Ill_Krunchall_12849:HG3_Ill_GATKHC_15338:HG3_Ill_GATKHCSBGrefine_6381:HG3_Ill_250bpfermikitraw_12494:HG3_Ill_150bpfermikitraw_12124:HG2_Ill_Krunchall_13182:HG2_Ill_GATKHC_15377:HG2_Ill_GATKHCSBGrefine_6480:HG2_Ill_250bpfermikitraw_12866:HG2_10X_SVrefine210Xhap12_6777:HG2_PB_pbsv_9531:HG4_PB_pbsv_9550:HG3_PB_pbsv_9282;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6777:HG2_Ill_250bpfermikitraw_12866:HG2_Ill_GATKHCSBGrefine_6480:HG2_Ill_GATKHC_15377:HG2_Ill_Krunchall_13182:HG3_Ill_150bpfermikitraw_12124:HG3_Ill_250bpfermikitraw_12494:HG3_Ill_GATKHCSBGrefine_6381:HG3_Ill_GATKHC_15338:HG3_Ill_Krunchall_12849:HG3_Ill_manta_2216:HG3_PB_SVrefine2Falcon1Dovetail_5795:HG3_PB_SVrefine2PBcRDovetail_4318:HG3_PB_assemblyticsfalcon_26515:HG4_Ill_250bpfermikitraw_12800:HG4_Ill_GATKHCSBGrefine_6598:HG4_Ill_GATKHC_15435:HG4_Ill_SVrefine2DISCOVARDovetail_6837:HG4_PB_assemblyticsfalcon_26047;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0659341;ClusterMaxEditDist=0.216216;PBcalls=11;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=87;DistBack=56;DistForward=8705;DistMin=56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=88;REFWIDENED=8:73763369-73763456;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5400.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:41:0|1:41:3:1:36:./.:0:0:0:0:0/1:16:16:./.:.:.:.:.:.
chr8	73979898	HG2_Ill_GATKHCSBGrefine_6482	A	AGGCTGGGGTAGGAGGATTGCTTGAGCCCAGGAGCTGGAGGCTGCAGTGAGCCGTGATCTCACCGCTGCACTTCAGCCTAGGTGACAGAGTGAAACCCTGTCTCAAAAAAAAAAAAAAAAAATTATTTATTATTTGTAATGTACTTGAAAACTGTTATCTCCTTCCTTCCTTCCTCTTTTTTTTTTTTTTTTTTTTTTAGACAGGGTCTCCCTCTGCCACTTAGGCTGCGGTGCAGTGGCACAATCATGGCTCACTGCAGCCTCTAATTCTTGGGCTCAAGCAGTCCTCCCACCCCAGCCTCCAAGGT	20	PASS	ClusterIDs=HG4_PB_pbsv_9553:HG2_PB_pbsv_9533:HG3_PB_assemblyticsfalcon_26518:HG4_PB_assemblyticsfalcon_26050:HG2_PB_assemblyticsfalcon_26613:HG2_Ill_breakscan11_3976:HG2_PB_PB10Xdip_30247:HG2_PB_PB10Xdip_30246:HG3_PB_pbsv_9284:HG3_PB_SVrefine2Falcon1Dovetail_5797:HG4_PB_SVrefine2Falcon1Dovetail_5829:HG2_10X_SVrefine210Xhap12_6779:HG3_PB_SVrefine2PBcRDovetail_4320:HG3_Ill_SVrefine2DISCOVARDovetail_7044:HG3_Ill_MetaSV_5285:HG3_Ill_GATKHCSBGrefine_6383:HG2_PB_SVrefine2PBcRplusDovetail_11069:HG2_PB_SVrefine2PB10Xhap12_6946:HG2_Ill_manta_2719:HG2_Ill_SVrefine2DISCOVARplusDovetail_12967:HG2_Ill_MetaSV_5111:HG2_Ill_GATKHCSBGrefine_6482:HG2_PB_SVrefine2Falcon1plusDovetail_11865:HG4_Ill_SVrefine2DISCOVARDovetail_6838:HG4_Ill_GATKHCSBGrefine_6601:HG4_PB_HySA_13828:HG2_PB_HySA_17132;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6482:HG2_Ill_MetaSV_5111:HG2_Ill_SVrefine2DISCOVARplusDovetail_12967:HG2_Ill_manta_2719:HG2_PB_SVrefine2PB10Xhap12_6946:HG2_PB_SVrefine2PBcRplusDovetail_11069:HG3_Ill_GATKHCSBGrefine_6383:HG3_Ill_MetaSV_5285:HG3_Ill_SVrefine2DISCOVARDovetail_7044:HG3_PB_SVrefine2PBcRDovetail_4320;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0819672;ClusterMaxEditDist=0.175719;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=307;DistBack=-8;DistForward=-1;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=8:73979899-73979905;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:23:0:25:./.:0:0:0:0:1/1:0:24:1/1:1:53:.:.:.
chr8	74044122	HG4_Ill_250bpfermikitraw_12803	C	CGCAAGAATCTTTCTACTAATTCTTAAGCCTGTCCTATGGTTTAAGCACAGGGCAGCACATTAGAACACCTTAGTTAATAACATATTTACTTTACACAT	20	PASS	ClusterIDs=HG2_PB_HySA_17135:HG2_PB_pbsv_9534:HG3_PB_HySA_14254:HG4_PB_HySA_13830:HG4_PB_pbsv_9555:HG4_PB_assemblyticsfalcon_26052:HG2_10X_SVrefine210Xhap12_6780:HG2_PB_PB10Xdip_30249:HG2_PB_PB10Xdip_30248:HG4_PB_SVrefine2Falcon1Dovetail_5831:HG4_Ill_manta_2333:HG4_Ill_Krunchall_13445:HG4_Ill_GATKHC_15440:HG4_Ill_GATKHCSBGrefine_6602:HG4_Ill_250bpfermikitraw_12803:HG4_Ill_150bpfermikitraw_12268:HG3_Ill_manta_2218:HG3_Ill_GATKHC_15344:HG3_Ill_GATKHCSBGrefine_6384:HG3_Ill_250bpfermikitraw_12500:HG3_Ill_150bpfermikitraw_12129:HG2_Ill_manta_2720:HG2_Ill_Krunchall_13186:HG2_Ill_GATKHC_15381:HG2_Ill_GATKHCSBGrefine_6483:HG2_Ill_250bpfermikitraw_12870:HG2_Ill_150bpfermikitraw_12092:HG4_PB_SVrefine2PBcRDovetail_4741:HG4_Ill_SVrefine2DISCOVARDovetail_6839:HG3_PB_SVrefine2PBcRDovetail_4321:HG3_PB_SVrefine2Falcon1Dovetail_5799:HG3_Ill_SVrefine2DISCOVARDovetail_7045:HG2_PB_SVrefine2PBcRplusDovetail_11070:HG2_PB_SVrefine2PB10Xhap12_6947:HG2_PB_SVrefine2Falcon1plusDovetail_11866:HG2_Ill_SVrefine2DISCOVARplusDovetail_12968;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12092:HG2_Ill_250bpfermikitraw_12870:HG2_Ill_GATKHCSBGrefine_6483:HG2_Ill_GATKHC_15381:HG2_Ill_Krunchall_13186:HG2_Ill_manta_2720:HG3_Ill_150bpfermikitraw_12129:HG3_Ill_250bpfermikitraw_12500:HG3_Ill_GATKHCSBGrefine_6384:HG3_Ill_GATKHC_15344:HG3_Ill_manta_2218:HG4_Ill_150bpfermikitraw_12268:HG4_Ill_250bpfermikitraw_12803:HG4_Ill_GATKHCSBGrefine_6602:HG4_Ill_GATKHC_15440:HG4_Ill_Krunchall_13445:HG4_Ill_manta_2333:HG4_PB_SVrefine2Falcon1Dovetail_5831;NumExactMatchSVs=18;ClusterMaxShiftDist=0.10628;ClusterMaxSizeDiff=0.10628;ClusterMaxEditDist=0.227488;PBcalls=15;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=98;DistBack=-57;DistForward=24;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=84;REFWIDENED=8:74044096-74044179;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5402.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:0:19:0:24:./.:0:0:0:0:./.:2:36:./.:.:.:.:.:.
chr8	75375333	HG3_Ill_SVrefine2DISCOVARDovetail_7053	T	TAAGATTGATCCTCGGCCGGGCGCGGTGGCTCGCGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3977:HG3_PB_pbsv_9294:HG4_PB_pbsv_9567:HG2_PB_assemblyticsfalcon_26630:HG2_PB_pbsv_9544:HG4_PB_assemblyticsfalcon_26068:HG3_PB_assemblyticsfalcon_26535:HG4_PB_HySA_13848:HG2_PB_HySA_17145:HG2_Ill_MetaSV_5116:HG4_Ill_SVrefine2DISCOVARDovetail_6855:HG3_PB_SVrefine2PBcRDovetail_4326:HG2_PB_SVrefine2PBcRplusDovetail_11078:HG2_PB_SVrefine2PB10Xhap12_6956:HG2_PB_SVrefine2Falcon1plusDovetail_11873:HG4_PB_SVrefine2PBcRDovetail_4750:HG4_PB_SVrefine2Falcon1Dovetail_5838:HG4_Ill_GATKHCSBGrefine_6618:HG3_Ill_SVrefine2DISCOVARDovetail_7053:HG3_Ill_MetaSV_5289:HG3_Ill_GATKHCSBGrefine_6399:HG2_Ill_SVrefine2DISCOVARplusDovetail_12974:HG2_Ill_GATKHCSBGrefine_6498:HG3_PB_SVrefine2Falcon1Dovetail_5807:HG2_10X_SVrefine210Xhap12_6790:HG3_PB_HySA_14268:HG2_PB_PB10Xdip_30262:HG2_PB_PB10Xdip_30261;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6498:HG2_Ill_SVrefine2DISCOVARplusDovetail_12974:HG3_Ill_GATKHCSBGrefine_6399:HG3_Ill_MetaSV_5289:HG3_Ill_SVrefine2DISCOVARDovetail_7053:HG4_Ill_GATKHCSBGrefine_6618:HG4_PB_SVrefine2Falcon1Dovetail_5838:HG4_PB_SVrefine2PBcRDovetail_4750;NumExactMatchSVs=8;ClusterMaxShiftDist=0.124417;ClusterMaxSizeDiff=0.124417;ClusterMaxEditDist=0.20597;PBcalls=18;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=320;DistBack=8332;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:75375334-75375346;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5403.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:1/1:0:27:1:22:./.:0:0:0:0:1/1:0:24:1/1:3:73:3991:.:.
chr8	77356847	HG2_PB_PB10Xdip_30556	C	TATATACATATACATATATGTATTTATGTATATATACATATACATATATGTATTTATGTATATATACATATACATATATGTATATGTATATATACATATACATATATGTATATGTATATATACATATACATATATGTATTTATGTATATATACATATACATATATGTATTTATGTATATATACATATACATATATGTATTTATGTATATACACATAAATACATATATGTATATACACATAAATACATATATGTATATACACATAAATACATATATGTATATATACATAAAAACATATATATACATAAATACATATATGTATATATACATAAATACATATACATATATGTATATGTATATATACGTATATGTATTTATGTATATATATGTATTTATGTATATATACACATATGTATTTATGTGTATATACACATATGTATTTATGTGTATATACATATATGTATTTATGTGTATATACATATATGTATTTATGTGTATATACATATACATATATGTATTTATGTGTATATACATATATGTATTTATGTGTATATACATATACATATATGTATTTATGTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4339:HG4_PB_HySA_13855:HG4_PB_pbsv_9577:HG2_PB_pbsv_9557:HG2_PB_HySA_17161:HG3_PB_pbsv_9309:HG2_PB_PB10Xdip_30557:HG2_PB_PB10Xdip_30556:HG2_PB_SVrefine2Falcon1plusDovetail_11880:HG4_Ill_SVrefine2DISCOVARDovetail_6864:HG4_PB_SVrefine2PBcRDovetail_4755:HG2_PB_SVrefine2PBcRplusDovetail_11083:HG2_PB_SVrefine2PB10Xhap12_6968:HG2_Ill_SVrefine2DISCOVARplusDovetail_12989:HG4_PB_SVrefine2Falcon1Dovetail_5845:HG3_PB_SVrefine2Falcon1Dovetail_5817:HG3_Ill_SVrefine2DISCOVARDovetail_7069;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_30556:HG2_PB_PB10Xdip_30557;NumExactMatchSVs=2;ClusterMaxShiftDist=0.144659;ClusterMaxSizeDiff=0.142977;ClusterMaxEditDist=0.289017;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=577;DistBack=-1;DistForward=49;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=161;REFWIDENED=8:77356759-77356919;PctSeqSimilarity=0.9838;PctSizeSimilarity=0.9681;PctRecOverlap=0.9665;SizeDiff=-19;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=5404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:86:./.:0:9:0:3:./.:0:0:0:0:1/1:2:21:1/1:5:113:.:.:.
chr8	77948339	HG4_Ill_GATKHC_15476	G	GTATATATATGTATATATGTATATATATGTATATATATGTATATATATGATGTAATGATATATATACGAGATATATGATTTGTGATATATATATATATATATATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_9580:HG4_PB_HySA_13858:HG3_PB_pbsv_9311:HG2_PB_assemblyticsfalcon_26655:HG3_PB_assemblyticsfalcon_26560:HG4_Ill_manta_2343:HG2_Ill_manta_2732:HG2_10X_SVrefine210Xhap12_6803:HG4_PB_SVrefine2PBcRDovetail_4757:HG3_Ill_Spiral_10067:HG3_Ill_SVrefine2DISCOVARDovetail_7072:HG2_PB_SVrefine2PBcRplusDovetail_11084:HG2_PB_SVrefine2PB10Xhap12_6970:HG2_PB_SVrefine2Falcon1plusDovetail_11882:HG4_PB_SVrefine2Falcon1Dovetail_5846:HG4_Ill_SVrefine2DISCOVARDovetail_6866:HG4_Ill_MetaSV_5349:HG4_Ill_GATKHC_15476:HG4_Ill_GATKHCSBGrefine_6630:HG3_PB_SVrefine2PBcRDovetail_4341:HG3_Ill_manta_2229:HG3_Ill_MetaSV_5296:HG3_Ill_GATKHC_15391:HG3_Ill_GATKHCSBGrefine_6412:HG2_Ill_SVrefine2DISCOVARplusDovetail_12994:HG2_Ill_GATKHC_15425:HG2_Ill_GATKHCSBGrefine_6514:HG3_PB_SVrefine2Falcon1Dovetail_5818:HG2_PB_PB10Xdip_30566:HG2_PB_PB10Xdip_30565:HG2_Ill_MetaSV_5125:HG2_PB_pbsv_9559:HG3_PB_HySA_14288:HG3_PB_HySA_14289;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6514:HG2_Ill_GATKHC_15425:HG2_Ill_SVrefine2DISCOVARplusDovetail_12994:HG3_Ill_GATKHCSBGrefine_6412:HG3_Ill_GATKHC_15391:HG3_Ill_MetaSV_5296:HG3_Ill_manta_2229:HG3_PB_SVrefine2PBcRDovetail_4341:HG4_Ill_GATKHCSBGrefine_6630:HG4_Ill_GATKHC_15476:HG4_Ill_MetaSV_5349:HG4_Ill_SVrefine2DISCOVARDovetail_6866:HG4_PB_SVrefine2Falcon1Dovetail_5846;NumExactMatchSVs=13;ClusterMaxShiftDist=0.153153;ClusterMaxSizeDiff=0.144144;ClusterMaxEditDist=0.283262;PBcalls=17;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=106;DistBack=382;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=8:77948317-77948348;PctSeqSimilarity=0.9817;PctSizeSimilarity=0.9636;PctRecOverlap=0.964;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=5405.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:11:0:17:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr8	80984582	HG2_PB_SVrefine2PBcRplusDovetail_11088	G	GTATGTGTGTATATACATGTACACATAGATATGCGTGTATATACATGTACACATAGATATGCGTGTATATACATGTACACATAGATATGCGTGTATATACATGTACACATAGATATGCGTGTATATACATGTACACATAGATATGCGTGTATATACATGTACACATAGATATGCGTGTATATACATGTACACATAGATATGCGTGTATATACATGTACACATAGATATGCGTGTATATACATGTACACATAGATATGCGTGTATATACATGTACACATAGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5823:HG3_PB_pbsv_9318:HG2_PB_HySA_17176:HG2_PB_pbsv_9566:HG4_PB_SVrefine2Falcon1Dovetail_5851:HG2_PB_SVrefine2PBcRplusDovetail_11088:HG2_PB_SVrefine2PB10Xhap12_6973:HG2_PB_SVrefine2Falcon1plusDovetail_11887:HG3_PB_SVrefine2PBcRDovetail_4343;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11887:HG2_PB_SVrefine2PB10Xhap12_6973:HG2_PB_SVrefine2PBcRplusDovetail_11088:HG4_PB_SVrefine2Falcon1Dovetail_5851;NumExactMatchSVs=4;ClusterMaxShiftDist=0.285714;ClusterMaxSizeDiff=0.285714;ClusterMaxEditDist=0.317829;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=280;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=350;REFWIDENED=8:80984583-80984932;PctSeqSimilarity=0.9757;PctSizeSimilarity=0.9524;PctRecOverlap=0.9525;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=5407.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:2:14:1:12:./.:0:0:0:0:./.:1:2:./.:.:.:.:.:.
chr8	81871781	HG4_Ill_manta_2346	T	TGTAGTTGCTTCAAAGCACTGTGTATCCTGGTGACGTAGTGCATGGAACTCTGGAGGTAAATCACTTTGTCTTTCTAGGCCTCTGTGTCCTCATTTGTATTGTTTTTTTGTTTG	20	PASS	ClusterIDs=HG2_PB_pbsv_9567:HG3_PB_pbsv_9319:HG4_PB_pbsv_9589:HG4_Ill_GATKHCSBGrefine_6635:HG2_PB_assemblyticsfalcon_26670:HG2_PB_SVrefine2Falcon1plusDovetail_11888:HG4_PB_SVrefine2Falcon1Dovetail_5852:HG4_PB_HySA_13871:HG4_PB_SVrefine2PBcRDovetail_4760:HG4_Ill_manta_2346:HG4_Ill_SVrefine2DISCOVARDovetail_6875:HG4_Ill_MetaSV_5352:HG4_Ill_250bpfermikitraw_12854:HG2_PB_assemblyticsPBcR_25881:HG2_PB_SVrefine2PBcRplusDovetail_11089:HG2_Ill_SVrefine2DISCOVARplusDovetail_13003:HG2_Ill_MetaSV_5126:HG2_Ill_250bpfermikitraw_12926:HG3_Ill_GATKHCSBGrefine_6419:HG2_Ill_GATKHCSBGrefine_6519:HG3_Ill_SVrefine2DISCOVARDovetail_7086:HG2_PB_SVrefine2PBcRplusDovetail_11090:HG2_Ill_SVrefine2DISCOVARplusDovetail_13004:HG2_PB_HySA_17178;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12926:HG2_Ill_MetaSV_5126:HG2_Ill_SVrefine2DISCOVARplusDovetail_13003:HG2_PB_SVrefine2PBcRplusDovetail_11089:HG2_PB_assemblyticsPBcR_25881:HG4_Ill_250bpfermikitraw_12854:HG4_Ill_MetaSV_5352:HG4_Ill_SVrefine2DISCOVARDovetail_6875:HG4_Ill_manta_2346:HG4_PB_SVrefine2PBcRDovetail_4760;NumExactMatchSVs=10;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.242424;PBcalls=12;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=113;DistBack=-1;DistForward=582;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:81871782-81871781;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5408.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:11:0:11:./.:0:0:0:0:1/1:0:11:./.:.:.:.:.:.
chr8	82836364	HG2_PB_SVrefine2Falcon1plusDovetail_11890	T	TAAAAAACCTTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4762:HG4_PB_pbsv_9592:HG4_PB_SVrefine2Falcon1Dovetail_5854:HG2_PB_pbsv_9570:HG2_PB_HySA_17186:HG2_PB_assemblyticsPBcR_25887:HG2_PB_assemblyticsfalcon_26673:HG2_PB_SVrefine2PBcRplusDovetail_11091:HG3_PB_SVrefine2Falcon1Dovetail_5824:HG2_PB_SVrefine2Falcon1plusDovetail_11890;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11890:HG3_PB_SVrefine2Falcon1Dovetail_5824;NumExactMatchSVs=2;ClusterMaxShiftDist=0.135095;ClusterMaxSizeDiff=0.135095;ClusterMaxEditDist=0.288515;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=342;DistBack=1;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:82836365-82836377;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9856;PctRecOverlap=0.9885;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:36:./.:7:15:9:4:./.:0:0:0:0:0/1:39:11:0/1:10:30:.:.:.
chr8	83710095	HG4_Ill_150bpfermikitraw_12322	G	GTATATATACACACACATATGTGTGTGTATATATATATACACACACATATGTGTGTGTATATA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_12151:HG4_PB_pbsv_9595:HG2_PB_PB10Xdip_30587:HG3_PB_pbsv_9323:HG4_PB_HySA_13881:HG2_PB_pbsv_9573:HG2_PB_HySA_17190:HG4_Ill_svaba_12106:HG4_Ill_manta_2348:HG4_Ill_Krunchall_13514:HG4_Ill_GATKHC_15511:HG4_Ill_GATKHCSBGrefine_6642:HG4_Ill_250bpfermikitraw_12863:HG4_Ill_150bpfermikitraw_12322:HG3_Ill_svaba_12131:HG3_Ill_Spiral_10090:HG3_Ill_Krunchall_12936:HG3_Ill_GATKHC_15433:HG3_Ill_GATKHCSBGrefine_6424:HG3_Ill_250bpfermikitraw_12575:HG3_Ill_150bpfermikitraw_12202:HG2_Ill_svaba_11996:HG2_Ill_manta_2736:HG2_Ill_Krunchall_13252:HG2_Ill_GATKHC_15458:HG2_Ill_GATKHCSBGrefine_6523:HG2_Ill_250bpfermikitraw_12938;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12151:HG4_Ill_svaba_12106:HG4_Ill_manta_2348:HG4_Ill_Krunchall_13514:HG4_Ill_GATKHC_15511:HG4_Ill_GATKHCSBGrefine_6642:HG4_Ill_250bpfermikitraw_12863:HG4_Ill_150bpfermikitraw_12322:HG3_Ill_svaba_12131:HG3_Ill_Spiral_10090:HG3_Ill_Krunchall_12936:HG3_Ill_GATKHC_15433:HG3_Ill_GATKHCSBGrefine_6424:HG3_Ill_250bpfermikitraw_12575:HG3_Ill_150bpfermikitraw_12202:HG2_Ill_svaba_11996:HG2_Ill_manta_2736:HG2_Ill_Krunchall_13252:HG2_Ill_GATKHC_15458:HG2_Ill_GATKHCSBGrefine_6523:HG2_Ill_250bpfermikitraw_12938;NumExactMatchSVs=21;ClusterMaxShiftDist=0.165414;ClusterMaxSizeDiff=0.135338;ClusterMaxEditDist=0.291971;PBcalls=6;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=-1;DistForward=26636;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:83710096-83710111;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5410.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:1/1:2:16:1:13:./.:0:0:0:0:1/1:3:59:./.:.:.:.:.:.
chr8	85437264	HG2_PB_assemblyticsfalcon_26684	GCCTCAATTT	TTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAAGCCAAGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGA	20	PASS	ClusterIDs=HG3_PB_HySA_14329:HG4_PB_pbsv_9599:HG3_PB_pbsv_9329:HG2_PB_pbsv_9576:HG2_PB_assemblyticsfalcon_26684:HG3_PB_SVrefine2PBcRDovetail_4347:HG2_PB_SVrefine2Falcon1plusDovetail_11891:HG2_Ill_MetaSV_5128:HG3_PB_SVrefine2Falcon1Dovetail_5825:HG4_PB_SVrefine2Falcon1Dovetail_5858:HG2_Ill_breakscan11_3978;NumClusterSVs=11;ExactMatchIDs=HG2_PB_assemblyticsfalcon_26684;NumExactMatchSVs=1;ClusterMaxShiftDist=0.159375;ClusterMaxSizeDiff=0.159375;ClusterMaxEditDist=0.200608;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=289;DistBack=880;DistForward=-9;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:85437274-85437263;PctSeqSimilarity=0.9836;PctSizeSimilarity=0.9383;PctRecOverlap=0.9644;SizeDiff=-19;StartDistance=0;EndDistance=9;GTMatch=0;TruScore=96;MatchId=5412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:35:0|1:42:6:0:29:./.:0:0:0:0:0/1:33:16:./.:.:.:.:.:.
chr8	85874307	HG3_PB_assemblyticsfalcon_26594	GATAG	ATGAGTGAGAACATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCTCCATCATGATACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAGAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCATGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGACAAATGGAACAGAACAGAGGCCTCAGAAATAACACCACACATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACCAGAAATGGGGAAAGGATTCCTTATTTAATAAACGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCGATCCCTTCCTTACACCTTACACAAAAATTAATTCAAGATGGATTAAAGATTTACATGTTAGACCTAAAAACCATAAAAGTCCTGAATATTATTGCCTAGGTTTTCTTCTAGGATTTTTATGGTTTTAGGTCTAACATGTAAATCTTTAATCTATCTTAAATTAATTTTTGTATAAGATGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCGTTTATTAAATAAGGAATCCTTTCCCCATTTCTGGTTTTTGTCAGGTTTGTCAAAGATCAGATGGTTGTAGATGTGTGGTGTTATTTCTGAGGCCTCTGTTCTGTTCCATTTGTCTATATCTCTGTTTTGGTACCAGTACCATGGTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCATGATGTCTCCAGCTTTGCTCTTTTTGCTTAGGATTATCTTGGCAATGTGGGCTCTTTTTGGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCACTGAATCTATAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTT	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_30590:HG2_PB_pbsv_9577:HG2_PB_assemblyticsfalcon_26686:HG2_PB_assemblyticsPBcR_25897:HG4_PB_assemblyticsfalcon_26131:HG3_PB_assemblyticsfalcon_26594:HG4_PB_SVrefine2Falcon1Dovetail_5859:HG2_PB_HySA_17204:HG3_PB_HySA_14332;NumClusterSVs=9;ExactMatchIDs=HG3_PB_assemblyticsfalcon_26594;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0346442;ClusterMaxSizeDiff=0.0241411;ClusterMaxEditDist=0.164662;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1067;DistBack=17;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1072;REFWIDENED=8:85883614-85864755;PctSeqSimilarity=0.9488;PctSizeSimilarity=0.9926;PctRecOverlap=0.9963;SizeDiff=-8;StartDistance=0;EndDistance=4;GTMatch=0;TruScore=97;MatchId=5413.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:2:44:1/1:0:21:0:6:./.:0:0:0:0:./.:8:0:0/1:21:56:.:1048:.
chr8	86174350	HG4_Ill_MetaSV_5358	A	ATGCCTGTAATCCCAGCCCAGGAGTTTCAGACCAGCCTAGGCAAGATGGCCAGACTCTGTCAATGAAATAAGAAATAGCCTTGAATGCATATTAAAGAACAGTATATAATTCCAAGGTTGGGTGCAGTGGCTCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6824:HG3_PB_pbsv_9333:HG2_PB_pbsv_9580:HG4_PB_HySA_13896:HG2_PB_PB10Xdip_30591:HG4_Ill_manta_2352:HG4_Ill_MetaSV_5358:HG4_Ill_GATKHCSBGrefine_6647:HG4_Ill_250bpfermikitraw_12879:HG4_Ill_150bpfermikitraw_12337:HG3_Ill_manta_2235:HG3_Ill_MetaSV_5305:HG3_Ill_GATKHC_15447:HG3_Ill_GATKHCSBGrefine_6432:HG2_Ill_manta_2739:HG2_Ill_MetaSV_5130:HG2_Ill_GATKHC_15472:HG2_Ill_GATKHCSBGrefine_6527:HG2_Ill_250bpfermikitraw_12953:HG2_Ill_150bpfermikitraw_12165:HG4_PB_pbsv_9602:HG3_PB_HySA_14335:HG2_PB_HySA_17205:HG4_PB_SVrefine2PBcRDovetail_4767:HG4_PB_SVrefine2Falcon1Dovetail_5861:HG4_Ill_SVrefine2DISCOVARDovetail_6898:HG3_PB_SVrefine2PBcRDovetail_4349:HG3_PB_SVrefine2Falcon1Dovetail_5827:HG3_Ill_SVrefine2DISCOVARDovetail_7106:HG2_PB_SVrefine2PBcRplusDovetail_11094:HG2_PB_SVrefine2PB10Xhap12_6981:HG2_PB_SVrefine2Falcon1plusDovetail_11894:HG2_Ill_SVrefine2DISCOVARplusDovetail_13018;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12165:HG2_Ill_250bpfermikitraw_12953:HG2_Ill_GATKHCSBGrefine_6527:HG2_Ill_GATKHC_15472:HG2_Ill_MetaSV_5130:HG2_Ill_manta_2739:HG3_Ill_GATKHCSBGrefine_6432:HG3_Ill_GATKHC_15447:HG3_Ill_MetaSV_5305:HG3_Ill_manta_2235:HG4_Ill_150bpfermikitraw_12337:HG4_Ill_250bpfermikitraw_12879:HG4_Ill_GATKHCSBGrefine_6647:HG4_Ill_MetaSV_5358:HG4_Ill_manta_2352;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0962963;ClusterMaxSizeDiff=0.0888889;ClusterMaxEditDist=0.20438;PBcalls=14;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=133;DistBack=-15;DistForward=45204;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=72;REFWIDENED=8:86174295-86174366;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5414.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:0:18:2:39:./.:0:0:0:0:1/1:1:38:./.:.:.:.:.:.
chr8	87315041	HG3_Ill_manta_2236	TCT	ACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_9339:HG2_PB_HySA_17214:HG4_PB_HySA_13902:HG3_PB_HySA_14342:HG2_PB_PB10Xdip_30610:HG4_PB_assemblyticsfalcon_26144:HG4_PB_SVrefine2Falcon1Dovetail_5866:HG2_PB_assemblyticsPBcR_25911:HG2_PB_SVrefine2PBcRplusDovetail_11103:HG2_PB_SVrefine2PB10Xhap12_6985:HG4_PB_SVrefine2PBcRDovetail_4776:HG3_PB_SVrefine2Falcon1Dovetail_5831:HG2_PB_assemblyticsfalcon_26696:HG2_PB_SVrefine2Falcon1plusDovetail_11898:HG3_PB_SVrefine2PBcRDovetail_4358:HG4_Ill_SVrefine2DISCOVARDovetail_6902:HG3_Ill_manta_2236:HG2_Ill_SVrefine2DISCOVARplusDovetail_13024:HG2_10X_SVrefine210Xhap12_6826:HG2_PB_pbsv_9584:HG4_Ill_MetaSV_5360:HG4_PB_pbsv_9609:HG3_Ill_MetaSV_5307;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13024:HG3_Ill_manta_2236:HG4_Ill_SVrefine2DISCOVARDovetail_6902;NumExactMatchSVs=3;ClusterMaxShiftDist=0.124481;ClusterMaxSizeDiff=0.124481;ClusterMaxEditDist=0.275304;PBcalls=17;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=112;DistBack=-1;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:87315044-87315040;PctSeqSimilarity=0.9868;PctSizeSimilarity=0.9911;PctRecOverlap=0.9652;SizeDiff=1;StartDistance=-2;EndDistance=0;GTMatch=1;TruScore=98;MatchId=5415.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:40:1/1:1:20:1:17:./.:0:0:0:0:1/1:0:16:./.:.:.:.:.:.
chr8	87976381	HG2_PB_assemblyticsfalcon_26702	G	GCCTGAGTAATAAACTCATCCCTTAGAACCAGCTGTTCCTCTATTGAATCTGGAGATAGAGTGGTATGTTTCACC	20	PASS	ClusterIDs=HG2_PB_pbsv_9587:HG2_PB_HySA_17220:HG3_PB_pbsv_9342:HG4_PB_pbsv_9613:HG4_PB_assemblyticsfalcon_26151:HG4_Ill_svaba_12130:HG4_Ill_manta_2353:HG4_Ill_Krunchall_13549:HG4_Ill_GATKHC_15538:HG4_Ill_GATKHCSBGrefine_6653:HG4_Ill_250bpfermikitraw_12897:HG4_Ill_150bpfermikitraw_12353:HG3_Ill_svaba_12158:HG3_Ill_manta_2238:HG3_Ill_Spiral_10113:HG3_Ill_Krunchall_12970:HG3_Ill_GATKHC_15469:HG3_Ill_GATKHCSBGrefine_6442:HG3_Ill_250bpfermikitraw_12609:HG3_Ill_150bpfermikitraw_12232:HG2_PB_assemblyticsfalcon_26702:HG2_PB_assemblyticsPBcR_25917:HG2_Ill_svaba_12018:HG2_Ill_manta_2742:HG2_Ill_SpiralSDKrefine_17088:HG2_Ill_Krunchall_13287:HG2_Ill_GATKHC_15493:HG2_Ill_GATKHCSBGrefine_6540:HG2_Ill_250bpfermikitraw_12972:HG2_Ill_150bpfermikitraw_12178:HG2_PB_PB10Xdip_30615:HG2_Ill_breakscan11_3979;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12178:HG2_Ill_250bpfermikitraw_12972:HG2_Ill_GATKHCSBGrefine_6540:HG2_Ill_GATKHC_15493:HG2_Ill_Krunchall_13287:HG2_Ill_SpiralSDKrefine_17088:HG2_Ill_manta_2742:HG2_Ill_svaba_12018:HG2_PB_assemblyticsPBcR_25917:HG2_PB_assemblyticsfalcon_26702:HG3_Ill_150bpfermikitraw_12232:HG3_Ill_250bpfermikitraw_12609:HG3_Ill_GATKHCSBGrefine_6442:HG3_Ill_GATKHC_15469:HG3_Ill_Krunchall_12970:HG3_Ill_Spiral_10113:HG3_Ill_manta_2238:HG3_Ill_svaba_12158:HG4_Ill_150bpfermikitraw_12353:HG4_Ill_250bpfermikitraw_12897:HG4_Ill_GATKHCSBGrefine_6653:HG4_Ill_GATKHC_15538:HG4_Ill_Krunchall_13549:HG4_Ill_manta_2353:HG4_Ill_svaba_12130:HG4_PB_assemblyticsfalcon_26151;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0675676;ClusterMaxSizeDiff=0.0526316;ClusterMaxEditDist=0.210526;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=-1;DistForward=2795;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=8:87976380-87976382;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:./.:0:0:0:1:./.:0:0:0:0:1/1:0:51:./.:.:.:.:.:.
chr8	88168501	HG2_Ill_manta_2743	G	GTGTGTGTGTGTGTGTGTGTGTGTATATATACATATATATATATATATATATATATATATATGTTTTTTTTTTTTTGAGACAGAGTT	20	PASS	ClusterIDs=HG4_PB_pbsv_9615:HG2_PB_pbsv_9590:HG3_PB_pbsv_9344:HG2_Ill_breakscan11_3980:HG2_PB_PB10Xdip_30620:HG2_PB_assemblyticsfalcon_26705:HG2_PB_HySA_17224:HG4_PB_SVrefine2Falcon1Dovetail_5870:HG4_PB_assemblyticsfalcon_26153:HG3_Ill_Spiral_10114:HG3_Ill_GATKHC_15470:HG3_Ill_GATKHCSBGrefine_6443:HG2_Ill_manta_2743:HG2_Ill_GATKHC_15498:HG2_Ill_GATKHCSBGrefine_6541:HG2_PB_SVrefine2PBcRplusDovetail_11105:HG2_PB_SVrefine2PB10Xhap12_6987:HG2_PB_assemblyticsPBcR_25921:HG4_Ill_manta_2354:HG4_Ill_GATKHC_15541:HG4_Ill_GATKHCSBGrefine_6655:HG4_Ill_150bpfermikitraw_12354:HG4_PB_HySA_13907;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6541:HG2_Ill_GATKHC_15498:HG2_Ill_manta_2743:HG3_Ill_GATKHCSBGrefine_6443:HG3_Ill_GATKHC_15470:HG3_Ill_Spiral_10114;NumExactMatchSVs=6;ClusterMaxShiftDist=0.19883;ClusterMaxSizeDiff=0.19883;ClusterMaxEditDist=0.247059;PBcalls=12;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=-1;DistForward=34559;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=8:88168500-88168503;PctSeqSimilarity=0.9775;PctSizeSimilarity=0.9556;PctRecOverlap=0.956;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=5417.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:6:22:1:29:./.:0:0:0:0:1/1:0:35:./.:.:.:.:.:.
chr8	88268933	HG2_Ill_SVrefine2DISCOVARplusDovetail_13028	T	TTTGCTAGTGCCATAAATATTTAAAGTTTTCTTCTGAAATTCTTTACAGCTTCTGAAAATACACGATAATAAATGCTTTGAAGGTAGCTTAATCTTTTACTAGTAGTTCCTCCATCAGCTTGCCTTTCACATTGTGTTGTTTTCCTTTGGAGTTGTTTGGTTTGTTCTACTTGTTCAGGCAACAAACAACCTCAATGTTTTATTCGAATGCACTCTGACATTTCAATTTGCCCCCAAGTTCTGTGTAGTAATGCTTTCTGACCGTACCATTTCTTACTTTAGAAGCATTTGGAATTAAACTACCAATTATTTGAGATGTCTACTAATATACTATGTGAATATCTGTGTATAAATTTACTATATTTAGACACAAAGTATCTCTCTGTGTATAGATATTCTATGAATAGGTCTATAATCTGTATAGATATTCAACAAAGACCAAATGCCTAGGTTTGACTACGAAAAAAATTCCCTGGGTGACTGAAGTGTTCTTTATGGATTAATTACTACTAGTGAAGTGTTCCTTATGGATTAGTTACTGTTTGGTTTGGAGTTAATCACAGGGGCCTATGCTTCTTCCTGACTTGTTGATGGCAGAAAATCTAAGTACATTTAGCAATAGTTCAAAAACTATTGTTTGTTCTGATAAAAGAAAAACTTCAGCTGAATTAAATTTAAAAGAGTTAAACTGAGCAATGAACCATTCGCGAATCAGGTAGCCCCCAGAATCACAGCATATTCACAGAGACTCCAGCGCAGCCACATGGTGAAAGAAGATTTATAGACCATAGAAGGGAAATGACACACAGAAATCAGCAGTGAGGTACAGAAAAAGCTGGATTGGTTACAGGTTGGTATTTGCCTTATTGGAACACAGTTTGAACACTTAGCAGTCTATGAGTAGTTAAAGTATGGCTGCTGGGATTGGCCAAGATTCAGTTATTGTTACAGGTGCATACTACTATGTTAGGTTTTCAGTCTTGTCTGACTGTTAAGCTAGGTTAAAGTTCATTCACAAGGACCCAAATATAGAAGTACAGAGTCCTTCTCAGGCCATATGTAGTCTGTTTTAACAATTTCCCCCTTTTGGTCATTTTCCCAATTTTGAGAGCTTGACCAAAACTTTAGTCATTGATGTCACTATCACCATCGTAAACGTACTTATATGGTCTTGAAACCCACTGGCAAACAGTAGAACAGTGGGTTTTGCAAGGAGGGAACAAGGACTGAGTAGAGGGTATCTCTTTATCCTGGAACATTCTGTTTACAGGAGAAAAAACCTGGCCTATTCTAGGATCTATGTGTTTCCTTAAAGTCTTAGTTTGATTATGTCACATTTAGTATGAGTGACTCCATTTTAATTTGGTTTGGTCTGTTGGGGCCTAGTGAATGAGCTCAGTCCAAAATAATGGTCTCCCATCATTTTGTTTAAAAAAAAAATTCCCCCTTTTGGCCAGGTTCTCACTTAGTTGAGAGTATGACCAAAACATAGGGCCTTAGCACCACTCTCAGTTACCATCATTTTGAGTTTCCTTTCTTAGCATGTTATTCATGGGTTATGGTGCCCTCATGGTTGCATATTTCTTTCAGCTTTTGTGATTCCAGTTGAAGAGAGACCATTTGACTTTCTAGAGCTGGCTGCATGCAAACATTTAAAACCTATGAGAGAATACAGTGCACCAGGGAGACCATTATTATGACTGTTGGGAGGATAATACCAAGAGTGTGGAGTGTGCTTCTTATACAGGGTCCCCATAAACCAAACCACCTAAAATTAAATAGATTAAAGAATGAGCTACATAAAGAGTCTACTTGCTTGACTGAGTGGTCTTTTCATTAATCCCCTACAACTGAAATTTTATAATCTGCATTGATGTATTTCTCCATAGGCCACAAGTGTCAGCAACTGCACAGGCACATTTGTGTTTAGACAATTCTATTATTTAGCATAACTTTCACAAACAAATTTAAAGTCTGTTATGTAACCATAGCCTTTACTGTAGAATCTGCTATAGAGCCTATCATGAAGGATACATTTCTAATTATTGCCTCTTTTCTTCTAAACAATGGAAAAGGACCTAACGAATGATGTCCTTCTAGAAGAGTTAAGGCCTTCTGGCAATGTTCTCTTTAACCCATGATTTGGGGTAAGAGGAGTTTTGACTGGTTATGAGGCAATGTATGTACCATTAAAATTTCTCATCTACATTGGGCCTTCATGTTTTATCTGTCAAAGTATAAGGTTATTAATGTATGAGGTTGGCTGCAAAATCCTTTGCAAATAAAAGTATTCCCTATAAGTGCACATTTTTCACTTCTGTTGTTCATAGAAGATAAACAAGAAAAAATATTCAAAGATAAGAGTCTCATGATAATAGAAGTCTTGATCCATGAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5835:HG2_Ill_Spiral_675:HG2_PB_assemblyticsPBcR_25922:HG2_PB_assemblyticsfalcon_26706:HG2_PB_HySA_17226:HG4_PB_HySA_13908:HG2_PB_SVrefine2PBcRplusDovetail_11106:HG2_Ill_SVrefine2DISCOVARplusDovetail_13028:HG2_10X_SVrefine210Xhap12_6831:HG4_PB_SVrefine2PBcRDovetail_4780;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6831:HG2_Ill_SVrefine2DISCOVARplusDovetail_13028:HG2_PB_SVrefine2PBcRplusDovetail_11106;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0274143;ClusterMaxSizeDiff=0.0274143;ClusterMaxEditDist=0.0372055;PBcalls=7;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=2394;DistBack=59732;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=8:88268934-88268936;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5418.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:64:0|1:36:0:0:43:./.:0:0:0:0:0/1:19:18:0/1:82:200:.:2412:.
chr8	88629116	HG2_PB_assemblyticsfalcon_26709	T	TTATATATATAATATATATATATATATATATATATATATATATATATAAACAGAGTCTCTCTCTGTCACCTAGGCTGAACTCACTGTAGCCCCCAAC	20	PASS	ClusterIDs=HG2_Ill_manta_2744:HG4_Ill_250bpfermikitraw_12900:HG2_PB_assemblyticsfalcon_26709:HG2_PB_SVrefine2Falcon1plusDovetail_11902;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsfalcon_26709;NumExactMatchSVs=1;ClusterMaxShiftDist=0.212766;ClusterMaxSizeDiff=0.179894;ClusterMaxEditDist=0.255319;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=96;DistBack=92;DistForward=13944;DistMin=92;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=86;REFWIDENED=8:88629032-88629117;PctSeqSimilarity=0.928;PctSizeSimilarity=0.8229;PctRecOverlap=0.0309;SizeDiff=17;StartDistance=85;EndDistance=85;GTMatch=0;TruScore=59;MatchId=5419.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:26:0|1:23:3:1:22:./.:0:0:0:0:0/1:3:6:./.:.:.:.:.:.
chr8	88756998	HG4_Ill_GATKHCSBGrefine_6656	T	TAAAAAATTGTATTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGCGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3981:HG4_PB_pbsv_9618:HG2_PB_pbsv_9593:HG4_PB_assemblyticsfalcon_26156:HG4_PB_SVrefine2Falcon1Dovetail_5871:HG2_PB_assemblyticsfalcon_26710:HG4_PB_HySA_13909:HG2_PB_SVrefine2Falcon1plusDovetail_11903:HG3_PB_SVrefine2Falcon1Dovetail_5836:HG2_Ill_MetaSV_5132:HG4_PB_SVrefine2PBcRDovetail_4781:HG4_Ill_GATKHCSBGrefine_6656;NumClusterSVs=12;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_6656:HG4_PB_SVrefine2PBcRDovetail_4781;NumExactMatchSVs=2;ClusterMaxShiftDist=0.138249;ClusterMaxSizeDiff=0.138249;ClusterMaxEditDist=0.196568;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=319;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:88756999-88757013;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5420.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:22:0|1:35:3:0:17:./.:0:0:0:0:0/1:17:6:0/1:12:29:.:.:.
chr8	90669895	HG2_PB_SVrefine2PB10Xhap12_6991	G	GGGCATTTATTTATTTATTTATTTATTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_17241:HG2_PB_HySA_17242:HG4_PB_pbsv_9626:HG2_PB_pbsv_9601:HG4_PB_assemblyticsfalcon_26168:HG2_PB_assemblyticsPBcR_25935:HG2_PB_assemblyticsfalcon_26721:HG3_PB_HySA_14361:HG4_PB_HySA_13925:HG4_PB_SVrefine2PBcRDovetail_4785:HG4_PB_SVrefine2Falcon1Dovetail_5875:HG2_PB_SVrefine2PBcRplusDovetail_11111:HG2_PB_SVrefine2PB10Xhap12_6991:HG3_PB_SVrefine2PBcRDovetail_4367:HG2_PB_SVrefine2Falcon1plusDovetail_11907:HG3_PB_SVrefine2Falcon1Dovetail_5840:HG2_10X_SVrefine210Xhap12_6840:HG3_Ill_MetaSV_5311:HG2_PB_PB10Xdip_30652:HG2_PB_PB10Xdip_30653:HG2_Ill_breakscan11_3982;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6991:HG2_PB_SVrefine2PBcRplusDovetail_11111;NumExactMatchSVs=2;ClusterMaxShiftDist=0.125182;ClusterMaxSizeDiff=0.116279;ClusterMaxEditDist=0.181818;PBcalls=18;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=346;DistBack=2239;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=8:90669896-90669905;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9971;PctRecOverlap=0.9942;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:0:15:1:27:./.:0:0:0:0:1/1:0:40:1/1:3:84:.:.:.
chr8	91006756	HG2_PB_SVrefine2PB10Xhap12_6992	T	TAATATATTATTAAATATAATAATATATAATATATTATTAAATATAATAATATATAATATATTATTAAATATAATATATAATATATTATTAAATATAATAATATATATATATTATTAAATATAATATATAATATATTATTAAATATAATAATATATATATATTATTAAATATAATATATAATATATTATTAAATATAATAATATATAATATATTATTAAATATAATAATATATAATATATTATTAAATATAATAATATATAATATATTATTAAATATAATAATATATAATATATTATTAAATATAATAATATATAATATATTATTAAATTAATAATATATAATATATTATTAAATATAATAATATATATATATAATATATATTATTATATAATATATTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5841:HG2_PB_SVrefine2PB10Xhap12_6992:HG4_PB_pbsv_9629:HG3_PB_SVrefine2PBcRDovetail_4368:HG4_PB_SVrefine2PBcRDovetail_4786:HG2_Ill_SVrefine2DISCOVARplusDovetail_13042:HG2_PB_SVrefine2PBcRplusDovetail_11112:HG2_PB_SVrefine2Falcon1plusDovetail_11908:HG4_PB_SVrefine2Falcon1Dovetail_5876;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6992;NumExactMatchSVs=1;ClusterMaxShiftDist=0.30102;ClusterMaxSizeDiff=0.30102;ClusterMaxEditDist=0.396396;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=398;DistBack=1;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=329;REFWIDENED=8:91006448-91006776;PctSeqSimilarity=0.9132;PctSizeSimilarity=0.8326;PctRecOverlap=0.833;SizeDiff=-80;StartDistance=22;EndDistance=22;GTMatch=1;TruScore=85;MatchId=5422.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:72:1/1:1:42:3:37:./.:0:0:0:0:0/1:7:22:0/1:8:24:.:.:.
chr8	92186264	HG2_Ill_GATKHC_15527	A	AGTGTAGTACCTTATTTTTCTTTTTTTTTTTTTTTTAAATTTTTTTTTTATTATACTCTAAGTTTTAGG	20	PASS	ClusterIDs=HG4_PB_HySA_13931:HG2_PB_HySA_17251:HG2_PB_pbsv_9608:HG3_Ill_svaba_12178:HG2_Ill_svaba_12039:HG4_Ill_svaba_12154:HG3_PB_HySA_14369:HG3_PB_pbsv_9358:HG4_Ill_svaba_12153:HG2_Ill_svaba_12038:HG4_PB_pbsv_9633:HG2_Ill_breakscan11_3983:HG2_PB_PB10Xdip_30660:HG2_PB_PB10Xdip_30659:HG3_PB_SVrefine2PBcRDovetail_4373:HG3_PB_SVrefine2Falcon1Dovetail_5846:HG3_Ill_manta_2246:HG3_Ill_Spiral_10132:HG3_Ill_GATKHC_15496:HG3_Ill_GATKHCSBGrefine_6454:HG3_Ill_150bpfermikitraw_12254:HG2_Ill_manta_2752:HG2_10X_SVrefine210Xhap12_6846:HG4_PB_SVrefine2PBcRDovetail_4791:HG4_PB_SVrefine2Falcon1Dovetail_5880:HG4_Ill_150bpfermikitraw_12379:HG4_Ill_svaba_12152:HG2_Ill_svaba_12037:HG4_Ill_manta_2360:HG4_Ill_SVrefine2DISCOVARDovetail_6921:HG4_Ill_Krunchall_13580:HG4_Ill_GATKHC_15578:HG4_Ill_GATKHCSBGrefine_6666:HG4_Ill_250bpfermikitraw_12929:HG2_Ill_GATKHC_15527:HG2_Ill_GATKHCSBGrefine_6552:HG2_Ill_150bpfermikitraw_12197:HG2_PB_SVrefine2PBcRplusDovetail_11116:HG2_PB_SVrefine2PB10Xhap12_6996:HG2_PB_SVrefine2Falcon1plusDovetail_11912;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12197:HG2_Ill_GATKHCSBGrefine_6552:HG2_Ill_GATKHC_15527:HG4_Ill_250bpfermikitraw_12929:HG4_Ill_GATKHCSBGrefine_6666:HG4_Ill_GATKHC_15578:HG4_Ill_Krunchall_13580:HG4_Ill_SVrefine2DISCOVARDovetail_6921:HG4_Ill_manta_2360;NumExactMatchSVs=9;ClusterMaxShiftDist=0.118519;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.22695;PBcalls=15;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=14;NumTechs=3;NumTechsExact=1;SVLEN=68;DistBack=2696;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=8:92186265-92186284;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5423.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:61:1/1:2:12:3:32:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr8	92677071	HG2_Ill_MetaSV_5136	T	TAAAAAAATTAAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_17252:HG4_PB_pbsv_9634:HG4_PB_assemblyticsfalcon_26182:HG2_PB_assemblyticsfalcon_26731:HG2_PB_pbsv_9609:HG4_PB_SVrefine2PBcRDovetail_4792:HG4_PB_SVrefine2Falcon1Dovetail_5881:HG4_Ill_MetaSV_5365:HG4_Ill_GATKHCSBGrefine_6667:HG2_Ill_MetaSV_5136:HG2_PB_SVrefine2Falcon1plusDovetail_11913:HG3_PB_SVrefine2Falcon1Dovetail_5847:HG4_PB_HySA_13933:HG2_Ill_breakscan11_3984;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_5136:HG4_Ill_GATKHCSBGrefine_6667:HG4_Ill_MetaSV_5365;NumExactMatchSVs=3;ClusterMaxShiftDist=0.163009;ClusterMaxSizeDiff=0.163009;ClusterMaxEditDist=0.184953;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:92677072-92677086;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5424.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:60:54:0|1:60:1:1:47:./.:0:0:0:0:0/1:21:12:0/1:10:29:.:.:.
chr8	94666519	HG4_Ill_SVrefine2DISCOVARDovetail_6926	G	GACTCCTTAAAATTTAGATGTCTGAGGTCCTTAGGAAAACAGGTGCTTCCCCCCAATGTAGCTTGGATTTGCTCTGAATGTGGCAGTCCCCTAAGCCAATAACACACTGCCTCCTGGCCTGCCCTGGCCACCCAGGGAGGAGTGAAGGGAGAGATAGGTATAGTGGTAATAAGCTTTGCTGTGCACAGCCTTGTGTAACGACTACAAAAGGCAATATGTTTTTCTGCTCCCACCCCCAAGCCTGATTTCTTCAAGATGCAGTAACTGACACCCTCACACATGCCCTCCCCTCTACCTCCCGTTATTCTGCCAAGAACCCTGTCTAAGGAACAAGGAAATCTCACAAAAGAAGATGTCTCAGGTACCCATTGGCAGCCATGACGTCATGACAAGTGGGTCTGGTGTCATTAAAAAGGTTGTCTTCAGCTGGGCAGGTGGCTCACGCTTATAATCCCAGCACTTTGAGAGGCCAAGGCAGGCGGATCACAAGGTCAGCAGATCAAGACCATCCTGGCTAACATGGTGAAATCCCATCTCTACTAAAAATACAAAAAATTCGCCGGGCGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAGGCGGAGCTTGCAGTGAGCAGAGATAGCGCCACTGC	20	PASS	ClusterIDs=HG2_Ill_Spiral_680:HG3_PB_pbsv_9368:HG2_PB_pbsv_9616:HG2_PB_assemblyticsfalcon_26746:HG4_PB_pbsv_9640:HG2_PB_SVrefine2PBcRplusDovetail_11123:HG4_PB_SVrefine2Falcon1Dovetail_5888:HG4_Ill_MetaSV_5366:HG4_PB_SVrefine2PBcRDovetail_4796:HG4_Ill_SVrefine2DISCOVARDovetail_6926:HG4_Ill_GATKHCSBGrefine_6676:HG3_Ill_MetaSV_5314:HG3_Ill_GATKHCSBGrefine_6462:HG2_Ill_MetaSV_5138:HG2_Ill_GATKHCSBGrefine_6558:HG2_10X_SVrefine210Xhap12_6852:HG3_PB_SVrefine2Falcon1Dovetail_5855:HG2_PB_SVrefine2Falcon1plusDovetail_11920:HG4_PB_HySA_13950:HG4_Ill_Spiral_789:HG3_Ill_Spiral_10152;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6852:HG2_Ill_GATKHCSBGrefine_6558:HG2_Ill_MetaSV_5138:HG3_Ill_GATKHCSBGrefine_6462:HG3_Ill_MetaSV_5314:HG4_Ill_GATKHCSBGrefine_6676:HG4_Ill_SVrefine2DISCOVARDovetail_6926:HG4_PB_SVrefine2PBcRDovetail_4796;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0615385;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.201141;PBcalls=10;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=668;DistBack=819;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=8:94666520-94666524;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5425.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:36:0|1:14:2:0:24:./.:0:0:0:0:0/1:21:19:0/1:15:52:.:.:.
chr8	95583002	HG2_Ill_GATKHCSBGrefine_6561	A	AAATAATAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAATAATAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11922:HG2_PB_pbsv_9619:HG4_PB_assemblyticsfalcon_26204:HG3_PB_pbsv_9370:HG3_PB_SVrefine2Falcon1Dovetail_5857:HG4_PB_SVrefine2Falcon1Dovetail_5891:HG3_PB_SVrefine2PBcRDovetail_4380:HG3_Ill_MetaSV_5315:HG3_Ill_GATKHCSBGrefine_6465:HG2_Ill_MetaSV_5139:HG2_Ill_GATKHCSBGrefine_6561:HG3_PB_HySA_14395:HG2_PB_HySA_17282;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6561:HG2_Ill_MetaSV_5139:HG3_Ill_GATKHCSBGrefine_6465:HG3_Ill_MetaSV_5315;NumExactMatchSVs=4;ClusterMaxShiftDist=0.110935;ClusterMaxSizeDiff=0.110935;ClusterMaxEditDist=0.212766;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=-10;DistForward=9394;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=8:95583003-95583012;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5426.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:27:0|1:38:3:0:25:./.:0:0:0:0:0/1:24:21:0/1:7:33:.:.:.
chr8	96473913	HG4_Ill_MetaSV_5370	T	TTTCCCTCAGGTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_17292:HG4_PB_assemblyticsfalcon_26213:HG4_PB_pbsv_9647:HG2_PB_pbsv_9622:HG2_PB_SVrefine2PBcRplusDovetail_11128:HG2_PB_assemblyticsPBcR_25980:HG2_PB_HySA_17293:HG2_Ill_MetaSV_5141:HG4_PB_HySA_13965:HG2_PB_SVrefine2Falcon1plusDovetail_11925:HG4_PB_SVrefine2PBcRDovetail_4799:HG4_Ill_MetaSV_5370:HG4_PB_SVrefine2Falcon1Dovetail_5894;NumClusterSVs=13;ExactMatchIDs=HG4_Ill_MetaSV_5370:HG4_PB_SVrefine2PBcRDovetail_4799;NumExactMatchSVs=2;ClusterMaxShiftDist=0.203554;ClusterMaxSizeDiff=0.203554;ClusterMaxEditDist=0.232406;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=318;DistBack=1051;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:96473914-96473928;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5427.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:45:0|1:41:1:0:39:./.:0:0:0:0:0/1:34:7:0/1:4:24:.:.:.
chr8	96609332	HG2_PB_SVrefine2PB10Xhap12_7008	T	TCCCTTCCCTCCCTCCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCCTCCCCCTCCCCTCCCCTCCCCTCCCCCTCCCCTCCCCTCCCCCTCCCCTCCCCCTCCCCTCCCCTCCCCCTCCCCTCCCCCTCCCCTCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4386:HG2_PB_SVrefine2Falcon1plusDovetail_11926:HG2_PB_PB10Xdip_30668:HG4_PB_SVrefine2PBcRDovetail_4800:HG4_PB_pbsv_9649:HG3_PB_SVrefine2Falcon1Dovetail_5861:HG2_PB_SVrefine2PBcRplusDovetail_11129:HG2_PB_pbsv_9623:HG2_PB_SVrefine2PB10Xhap12_7008:HG4_PB_SVrefine2Falcon1Dovetail_5895;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7008:HG2_PB_SVrefine2PBcRplusDovetail_11129;NumExactMatchSVs=2;ClusterMaxShiftDist=0.203077;ClusterMaxSizeDiff=0.203077;ClusterMaxEditDist=0.234568;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=178;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=108;REFWIDENED=8:96609333-96609440;PctSeqSimilarity=0.9775;PctSizeSimilarity=0.9674;PctRecOverlap=0.6486;SizeDiff=-6;StartDistance=-62;EndDistance=-62;GTMatch=0;TruScore=86;MatchId=5428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:./.:0:1:1:1:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr8	96783532	HG2_PB_SVrefine2PB10Xhap12_7009	T	TAAAATAGAATAACAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_13971:HG4_PB_pbsv_9651:HG2_PB_PB10Xdip_30670:HG3_PB_pbsv_9378:HG2_PB_pbsv_9626:HG4_PB_assemblyticsfalcon_26217:HG2_PB_assemblyticsPBcR_25982:HG3_PB_HySA_14405:HG2_PB_HySA_17301:HG2_Ill_MetaSV_5142:HG3_PB_SVrefine2PBcRDovetail_4388:HG3_PB_SVrefine2Falcon1Dovetail_5862:HG4_PB_SVrefine2Falcon1Dovetail_5897:HG2_PB_SVrefine2PB10Xhap12_7009:HG2_PB_SVrefine2Falcon1plusDovetail_11928:HG2_PB_SVrefine2PBcRplusDovetail_11130;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11928:HG2_PB_SVrefine2PB10Xhap12_7009:HG4_PB_SVrefine2Falcon1Dovetail_5897;NumExactMatchSVs=3;ClusterMaxShiftDist=0.174184;ClusterMaxSizeDiff=0.174184;ClusterMaxEditDist=0.224299;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=2842;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:96783533-96783548;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5429.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:41:0|1:27:0:0:43:./.:0:0:0:0:0/1:34:16:0/1:6:25:.:.:.
chr8	97585565	HG3_PB_SVrefine2PBcRDovetail_4394	C	CACAACAGCCAGTTGTTCAACATGAATTGAGAAAACGGTCCTCTATCAAAGGTCATCTTCTTTCCTTCCCTCCTTCCCTCCCTCCTTCCTTCCTTCCCTCCCACCAGCATGTTCTGCCTCCTCATTCTTCCAACTCCTCGCATCTCAGACACAAGTTGCTGTCTGAGCCCACATGTATGTACTTGCTGTATGACGGTTGACAGTGAAGGACTCTGTTCCTCAGCG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3986:HG3_PB_pbsv_9384:HG4_PB_assemblyticsfalcon_26224:HG2_PB_pbsv_9629:HG2_PB_assemblyticsPBcR_25989:HG4_PB_pbsv_9657:HG3_PB_HySA_14413:HG4_PB_HySA_13978:HG4_PB_SVrefine2PBcRDovetail_4808:HG4_PB_SVrefine2Falcon1Dovetail_5903:HG4_Ill_svaba_12198:HG4_Ill_manta_2364:HG4_Ill_SVrefine2DISCOVARDovetail_6934:HG4_Ill_MetaSV_5375:HG4_Ill_GATKHCSBGrefine_6686:HG3_PB_SVrefine2PBcRDovetail_4394:HG3_PB_SVrefine2Falcon1Dovetail_5866:HG3_Ill_svaba_12219:HG3_Ill_manta_2255:HG3_Ill_SVrefine2DISCOVARDovetail_7158:HG3_Ill_MetaSV_5321:HG3_Ill_GATKHCSBGrefine_6476:HG2_PB_SVrefine2PBcRplusDovetail_11133:HG2_PB_SVrefine2Falcon1plusDovetail_11931:HG2_Ill_svaba_12075:HG2_Ill_manta_2759:HG2_Ill_SVrefine2DISCOVARplusDovetail_13066:HG2_Ill_MetaSV_5144:HG2_Ill_GATKHCSBGrefine_6567:HG2_10X_SVrefine210Xhap12_6863;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6863:HG2_Ill_GATKHCSBGrefine_6567:HG2_Ill_MetaSV_5144:HG2_Ill_SVrefine2DISCOVARplusDovetail_13066:HG2_Ill_manta_2759:HG2_Ill_svaba_12075:HG2_PB_SVrefine2Falcon1plusDovetail_11931:HG2_PB_SVrefine2PBcRplusDovetail_11133:HG3_Ill_GATKHCSBGrefine_6476:HG3_Ill_MetaSV_5321:HG3_Ill_SVrefine2DISCOVARDovetail_7158:HG3_Ill_manta_2255:HG3_Ill_svaba_12219:HG3_PB_SVrefine2Falcon1Dovetail_5866:HG3_PB_SVrefine2PBcRDovetail_4394:HG4_Ill_GATKHCSBGrefine_6686:HG4_Ill_MetaSV_5375:HG4_Ill_SVrefine2DISCOVARDovetail_6934:HG4_Ill_manta_2364:HG4_Ill_svaba_12198:HG4_PB_SVrefine2Falcon1Dovetail_5903:HG4_PB_SVrefine2PBcRDovetail_4808;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0393873;ClusterMaxSizeDiff=0.0264317;ClusterMaxEditDist=0.244541;PBcalls=13;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=224;DistBack=8252;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=8:97585566-97585566;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:./.:0:2:0:1:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr8	100157813	HG3_PB_SVrefine2Falcon1Dovetail_5871	AGGTTGACT	CTCATTAAAACTACACATCTATCAGAATGGCTAAAATAAAAAGCAGTGACAAAACAAAATGCTGGGAAGATGTAAAGAAGCTGGATCACACAGTCATCGTTGGATGGTAATGTAAAATGGTATGGCCACTCCTGAAAACAGCTTGGTAGTTTCTTTAAAAAAATAATAAACATGCAACTACCATATGACCCAGCAATTTATCCTGAAGAAATGTTTACACAAAACCAGTACACAACTGTTCAGAGCAGCATTATTTGTAATAGCCCAAAACTAGAATAATCCCAAATATTCTTCCATAAGTGAGGGAATTAACAAACTATAG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5149:HG4_PB_HySA_14001:HG4_PB_assemblyticsfalcon_26242:HG4_PB_SVrefine2Falcon1Dovetail_5908:HG3_PB_SVrefine2Falcon1Dovetail_5871:HG2_PB_assemblyticsfalcon_26801:HG2_PB_SVrefine2Falcon1plusDovetail_11937:HG2_PB_pbsv_9639;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5871:HG4_PB_SVrefine2Falcon1Dovetail_5908:HG4_PB_assemblyticsfalcon_26242;NumExactMatchSVs=3;ClusterMaxShiftDist=0.10356;ClusterMaxSizeDiff=0.10356;ClusterMaxEditDist=0.214634;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=-9;DistForward=-9;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:100157822-100157812;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9781;PctRecOverlap=0.9844;SizeDiff=-7;StartDistance=1;EndDistance=9;GTMatch=0;TruScore=98;MatchId=5432.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:58:0|1:32:0:0:25:./.:0:0:0:0:0/1:34:28:0/1:15:18:.:.:.
chr8	101439104	HG3_PB_pbsv_9395	C	CCTGCCCACCACCAGCCACCAGTTCACGGAGCGCGGTGATTTACCACTCATCACCACCACCCACCACCACCTTTACCACCACCACCACCGTACCACCACCGACCACCATTACCACCACCACCACCTATTTTACCACCACCACAACCATTACCACCATCACCACCACCACCACCACCACCACCACCCATCATTACCACCACCCAGCCACTCCCACCACCACCACCAATCAACACCATCATTATCCACCATCACACACCACCCCACCGAACCACCCACCACCCCACCACCATTACAAGCCATTACCACCACCCACCACCATTACCACCATCAACCGACCACCACCCACCACCACCACCACGCCATCATTTTACCACCCACCACGACTACGCCACCACCACCACCAACCACCGACCATGCATTTACCACCACCACCACTACCACCACCCCCACCGAGTCGACCACCATCATTACCACATCATCCACCACCACCACCAGCCTTTACACCACCCACCACTACCACGCCCACCACCATTACCACCACCACCACCATTACCGACCATCACCACCACCACCACGGTACCACCACCACCATCATTACCACCACCACCACTTACCACCACCACCACCATTCCCCACATCATTACACGATCACACCACCACCAACACCTTGTACGCAACCACCACCACACCACCACCACCCACATTACCACCACCACCACCATTACCACCACCTCACCATCCATCATTACCACCATCACCACCATCCATTACCCCACCATCACCACCATCATTACCACCATCACCACCACTCACCACCACCTTTACACACCACCACCACCACCACCACCCCATCGTATTAGCCACCACACCCCACTACCTACCATCTTTACCAGCAACCACCACCACCATTACCAGCCACCACCGACTACCACCACCACCATCATTACCACCACCCCAACTACCCACCACAGCCACATGTACCACCACCACGATATACCACCACCACCATCACACCATCATTACCACCATCACGACCACCACCCACCACCTTTACCACCACCACGCACCACCACCACCATCTTTACCACCACCACCACCACCTTTACACCACCCACCCTACCACCAGCCGACCATCATTACCACCGACCACCACTACCACACACCATCACCGACCATCATTACCCACCATTCACCCCACCACCACCACCACGTTTAGCCACACCACCACTACCACCACCACATCATTACCACCACCACCACCTAACCACCTTTTTACCACCACCACCACTACCACCGACCCCACCATCAGTTACCATCCACCACCACCACCTACCACCACCATTCATTACCACCACCACATTACCACCACACCAAGTTACCACTATTCACCACTACCACCACCCCTCATGCACCACCAATCGATTACCACCACCACCACCACCACGATCATTTACCACCACCAACCACCACCACCACCACCATCAGTACCACCACCACCATTACCACCACCACCAATTACCCTATCACCACTACCAGCCACCACCATCACCACCGATCATTACCACCATCACCACACACCATCTTTACCACCCACCACCACTACCACCGACCACCACCGATCATTTACCACCACCACCACCCCGATTACACCATCACCACTACCACCACCACCATCCACCACCATCACCACCAAACCGATCGATTTACCATGCCGACCGCCCACCCCACCACTACCACCAGCCACCACCACCATTACCCACCACCACCTGCTTACGCACCATCACCACTACCACCACTACCATCACTACCACCACCACCAACACTCTCACTACCACCACTACCACCATTCCAAATTACCACCATCACCACTACCAGTTGCCTACGACGCACCAATTACCACCATCCACACTACTCAGCCACCTCATTGAACCACCACCAATTTTATCCACCAGCCACCATTCACTACCACACCACCACCTCACTACCACCACTTACCACCAATCAATTACCACCACCACCACCACCAACCATTTACTACTACCAACCACCCACCACTGACCACCACAACCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7016:HG2_PB_pbsv_9640:HG3_PB_pbsv_9395:HG2_PB_SVrefine2Falcon1plusDovetail_11938:HG3_PB_HySA_14442:HG2_PB_SVrefine2PBcRplusDovetail_11144:HG4_PB_SVrefine2PBcRDovetail_4815:HG4_PB_pbsv_9671:HG4_PB_SVrefine2Falcon1Dovetail_5909:HG3_PB_SVrefine2Falcon1Dovetail_5872;NumClusterSVs=10;ExactMatchIDs=HG3_PB_pbsv_9395;NumExactMatchSVs=1;ClusterMaxShiftDist=0.187816;ClusterMaxSizeDiff=0.186371;ClusterMaxEditDist=0.284132;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=2070;DistBack=161;DistForward=26408;DistMin=161;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=113;REFWIDENED=8:101438993-101439105;PctSeqSimilarity=0.9433;PctSizeSimilarity=0.9411;PctRecOverlap=0.8899;SizeDiff=122;StartDistance=167;EndDistance=167;GTMatch=1;TruScore=92;MatchId=5434.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:80:1/1:6:24:4:27:./.:0:0:0:0:0/0:17:0:0/1:23:127:.:1962:.
chr8	103554128	HG2_PB_PB10Xdip_29276	T	TTTTTTTTTTTTGAGACGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCACTGCAACCTCCGCTTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCATGCACCACCGTGCCTGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCCCCATATTAAGTCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCTAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCATATCACTCATTCTTTATCCTGCCATCTATCAGCTCACACATCAGCATGAATAGAGAAGTAGGACTGAGTGCAAGCACCGACCTAGGTCCTACCTAGGACAGGGATTGTCAGGCCCCTTGCACTGTCTTCTTGAAGGTACTAGCAGTAGGAGAATCCTTGGAAACCTCCAAAAGGGTACGTTCTAGCTCGGAGTCAGGAGAGGCAGGAGGGAAGCTGGTCCCATTCTTTGCAGAGCTTTGACAACTCCAGCCAGGAGGGAACTGATGGGACAGGAGGAGGGACGGGTGCCTGGCAGAGCCCTCAGGAGCACAGGCCTTCCTTTCTGATCCTGATGGATCCCACTGCCTGCCCTAGCTCTGCGTCACCCCTCTTCGCTTCTCCCCATCAGTACAGTCTCTGGCCTGTTCCCCATCAATCCATTCATCCATCCTCATTGAGCCACAGACACTATGCTGGGTACTATGGATATGGATGTGCGGAGCAGGTCTAGGAAATGGCCAGGAGTGAGTCAGACATGTAAGTAAATCATTACAACTATGATGCCTGCCATGAGACAAAGGCCCAGGCACTTAGGGGCACATTACGGGTGAACAGAAGAGGCTGACCCCAGGGAAGTGGTATTCAAGTTGAGATCTGAATGGTGAGTAGGGTTAGCTGAGTGGAGAAGGTTCAAAGTGTGGAGGATGGCAGAGAAACAGCTTTGCCAAGGCACTGAGGTGGAAAGGGCGAGGTGTGTCCTACCTCTGCCATCAGTACTCACTTTCTCCTTGGGAACTTCTCCCACTGTCCCCATCCCCACCACACCCACCCTGAATCTGAATGAGCCATGGAGCCGTGGCCTGGTGGGAAACCCCATGGAAACCCCGTCTCTACTAAAAACACACAAAAAATTAGCTGGGTATAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGCCTGAAGCAGGGGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCACGCCACAGCACTCCAGCCAGGCAACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAGATTTAGGAGGTGAACTGTTCCAGGAGATGATAGAAGCTGATGAGATCTGGGAGGGAAGTGCTGAGGTGATGGTAATTGAAGGCACATAAATTAAAAAGCTGAGAACCTACCTAGATGCCAGCCTGGTAGCTGGCAGGAGTTGGTGGGGAGAGAGAGAATGATCTGCAGAGGAGAGGGTAGGAGAATTGGATGGAAAGGCCCCATCCACTACCACAGCCCCTCCTGCCCTGGTCACGACCATGAGAAATCCACGGGAAAGCCAGGGGAGGCTCGTGCAGGCTCTGGACATGCTCCTTCCTCCTTCCCTGCCTCTGATGGTGCAGGGGGACAGAACTTTGAGAAACATCAGGAAAACACACTCCAGTTTTATTTATATGAGATCAACATGTGTTTGCAAGACTAAGGGTAAATGAAATTTTAACAGAGAAAGACAAACTCAGGCATTAGTAGTGGTCTGACTGTACCCCTGAAGGAGTAACTTGAACAGTATTGAACACCTTTCTTTGGGTGGTGTCCACCATGATCAAGCCCTGCAGCCTTCTGCTGGCCTCCCCAGTTGTTTCTGGGAGCTCTGTGGGATGTCTCTAGAAGCTTACAACAGCCCTCGCCAGCCCTGCTAGGAGTCCATCACTTTGCCCATCTCCTCCTCTGGCTTGCTTCGTGGAGGTTCCTGGTCCTCTAGCCTAGAAGTCATCCATGGATTTCTGGCCACATTCCCAGGGCAGTTCCAAGGTCTCTGACATCATTGCCAAGGGTGCCATCTCCTGGGGCTTCCAGCAGGGGTGCTGCCTCTAGCAGCTTCTGCAGAGCAGCAGTGTTCCTGAATGCCTCTGTTAGCACAATTGGGACCTCTCCCAGGTCGGCTCTGGGAAACCGGGGCCACTGTTAATGTGCCAGAGCTTTGCTCTGTTCTCTGGAGCCTCCAAAGCACCAAAGCCATCCCATGTTTCACGTCAACGTGGGAAGACTGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5876:HG2_PB_pbsv_9647:HG2_PB_assemblyticsPBcR_26048:HG3_PB_pbsv_9400:HG2_PB_SVrefine2PBcRplusDovetail_11150:HG2_PB_HySA_17364:HG2_PB_SVrefine2Falcon1plusDovetail_11943:HG2_PB_SVrefine2PB10Xhap12_7018:HG2_PB_PB10Xdip_29276;NumClusterSVs=9;ExactMatchIDs=HG2_PB_PB10Xdip_29276:HG2_PB_SVrefine2PB10Xhap12_7018;NumExactMatchSVs=2;ClusterMaxShiftDist=0.143856;ClusterMaxSizeDiff=0.142657;ClusterMaxEditDist=0.245483;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2326;DistBack=51557;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=8:103554129-103554130;PctSeqSimilarity=0.9996;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:49:0|1:28:2:3:32:./.:0:0:0:0:0/1:24:16:0/1:83:169:.:2494:.
chr8	103880131	HG4_Ill_250bpfermikitraw_13015	T	TTTTGCCAAATGGCAAATCACTGGTAAACTCCAATCTCATATTTAAAAGTTTGGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3987:HG4_PB_pbsv_9679:HG2_PB_pbsv_9651:HG2_PB_assemblyticsfalcon_26820:HG2_PB_assemblyticsPBcR_26055:HG2_PB_HySA_17368:HG3_PB_HySA_14456:HG4_Ill_svaba_12250:HG4_Ill_manta_2371:HG4_Ill_SVrefine2DISCOVARDovetail_6973:HG4_Ill_Krunchall_13671:HG4_Ill_GATKHC_15705:HG4_Ill_GATKHCSBGrefine_6702:HG4_Ill_Cortex_3698:HG4_Ill_250bpfermikitraw_13015:HG4_Ill_150bpfermikitraw_12469:HG3_Ill_svaba_12267:HG3_Ill_manta_2263:HG3_Ill_Spiral_10205:HG3_Ill_SVrefine2DISCOVARDovetail_7195:HG3_Ill_Krunchall_13078:HG3_Ill_GATKHC_15611:HG3_Ill_GATKHCSBGrefine_6488:HG3_Ill_Cortex_3726:HG3_Ill_250bpfermikitraw_12718:HG3_Ill_150bpfermikitraw_12332:HG2_PB_SVrefine2PBcRplusDovetail_11152:HG2_PB_SVrefine2PB10Xhap12_7019:HG2_PB_SVrefine2Falcon1plusDovetail_11944:HG2_Ill_svaba_12134:HG2_Ill_manta_2770:HG2_Ill_SpiralSDKrefine_17172:HG2_Ill_SVrefine2DISCOVARplusDovetail_13095:HG2_Ill_Krunchall_13398:HG2_Ill_GATKHC_15655:HG2_Ill_GATKHCSBGrefine_6586:HG2_Ill_Cortex_8998:HG2_Ill_250bpfermikitraw_13088:HG2_Ill_150bpfermikitraw_12281:HG2_10X_SVrefine210Xhap12_6886:HG2_PB_PB10Xdip_29288;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6886:HG2_Ill_150bpfermikitraw_12281:HG2_Ill_250bpfermikitraw_13088:HG2_Ill_Cortex_8998:HG2_Ill_GATKHCSBGrefine_6586:HG2_Ill_GATKHC_15655:HG2_Ill_Krunchall_13398:HG2_Ill_SVrefine2DISCOVARplusDovetail_13095:HG2_Ill_SpiralSDKrefine_17172:HG2_Ill_manta_2770:HG2_Ill_svaba_12134:HG2_PB_SVrefine2Falcon1plusDovetail_11944:HG2_PB_SVrefine2PB10Xhap12_7019:HG2_PB_SVrefine2PBcRplusDovetail_11152:HG3_Ill_150bpfermikitraw_12332:HG3_Ill_250bpfermikitraw_12718:HG3_Ill_Cortex_3726:HG3_Ill_GATKHCSBGrefine_6488:HG3_Ill_GATKHC_15611:HG3_Ill_Krunchall_13078:HG3_Ill_SVrefine2DISCOVARDovetail_7195:HG3_Ill_Spiral_10205:HG3_Ill_manta_2263:HG3_Ill_svaba_12267:HG4_Ill_150bpfermikitraw_12469:HG4_Ill_250bpfermikitraw_13015:HG4_Ill_Cortex_3698:HG4_Ill_GATKHCSBGrefine_6702:HG4_Ill_GATKHC_15705:HG4_Ill_Krunchall_13671:HG4_Ill_SVrefine2DISCOVARDovetail_6973:HG4_Ill_manta_2371:HG4_Ill_svaba_12250;NumExactMatchSVs=33;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.242991;PBcalls=10;Illcalls=30;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=29;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=54;DistBack=57156;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=8:103880132-103880134;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5437.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:./.:0:0:0:2:./.:0:0:0:0:1/1:0:69:./.:.:.:.:.:.
chr8	106664511	HG4_PB_pbsv_9686	A	AAAAGCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGACGGAAAGTCGTCGCTCTGTCGCCCAGGCTGGGAGTCAGTGGGCAGGATCTCGGCTCACTGCAAGCTCGCCTCCCGGTTCACGCCATTTCTCCTGCCTCCATGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGTCCCGGGCTAATTTTTTTGTATTTTTTTTTTTTGTTTTTTTTTTTTTTTAGTTAGAGACGGGCGTTTCACCTGTTTTAGCCGGGATGGTCTTCGATCCCCTGACCTCGTGATTCGCCCGCCTCGGCCTCCCAAAGTGCTGCCGGGATTTACAGGCGTGAGCCACCGCGGCCCGGC	20	PASS	ClusterIDs=HG4_PB_pbsv_9686:HG2_Ill_breakscan11_3988:HG2_PB_pbsv_9659:HG4_PB_HySA_14042:HG4_PB_SVrefine2PBcRDovetail_4825:HG4_PB_SVrefine2Falcon1Dovetail_5918:HG4_Ill_SVrefine2DISCOVARDovetail_6988;NumClusterSVs=7;ExactMatchIDs=HG4_PB_pbsv_9686;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0873362;ClusterMaxSizeDiff=0.084425;ClusterMaxEditDist=0.229371;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=357;DistBack=14608;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=8:106664512-106664522;PctSeqSimilarity=0.9161;PctSizeSimilarity=0.93;PctRecOverlap=0.9328;SizeDiff=25;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=5438.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:40:0|1:47:2:0:36:./.:0:0:0:0:0/1:31:12:0/1:11:12:.:.:.
chr8	107207878	HG2_Ill_MetaSV_5157	A	AGACACTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_17400:HG4_PB_pbsv_9691:HG4_PB_HySA_14049:HG2_PB_pbsv_9666:HG4_PB_assemblyticsfalcon_26286:HG2_PB_assemblyticsfalcon_26845:HG4_PB_SVrefine2Falcon1Dovetail_5924:HG2_PB_SVrefine2Falcon1plusDovetail_11950:HG4_Ill_MetaSV_5387:HG4_Ill_GATKHCSBGrefine_6713:HG2_Ill_MetaSV_5157:HG2_Ill_GATKHCSBGrefine_6597:HG3_PB_SVrefine2Falcon1Dovetail_5885;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6597:HG2_Ill_MetaSV_5157:HG4_Ill_GATKHCSBGrefine_6713:HG4_Ill_MetaSV_5387;NumExactMatchSVs=4;ClusterMaxShiftDist=0.124204;ClusterMaxSizeDiff=0.124204;ClusterMaxEditDist=0.181529;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=311;DistBack=14;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=8:107207879-107207888;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5440.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:38:0|1:27:2:0:33:./.:0:0:0:0:0/1:23:10:0/1:6:50:.:.:.
chr8	109135926	HG3_PB_pbsv_9423	G	GTATTTAATGGGCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCACACGTCTCCTCTCATGCCGAGCGAAGCTGACTGCTAACTGCTCGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGTCTGCCACATGCCTGCGATTGCAACACGCGCCACCATAACCTAGACTGGTTCTTGGTGAGACGGTGGTTTCCCTGTGTTGGCCTGGCGCCGGTCTCACAACCCCTAACCAGCGAGTGAATCCCAACCTCGGCATCCCTGAGGTGCCAACGTGATTGAGACGGAGTCCTCGTTCAACATCAGTGCTCAATGGTGCCCAGGCTCGGAGTGCAGTGGCGTGATCTCTCGGCTGCTACAACCTACACTCCCAGCCGCCTGCCTTGGCCTCCAAAGTGGCGAGATTGCAGCCTCTGGGCCGGCCGCCACCGCGTCTGGGAAGTCGAGGAGTGTCCCTCTGCTGGCCCCCATCATCTGGGATGTGGGGACCCCTCTGCCTGGCTGCCCAGTCTGGAAGTGAGGAGCGTCTCCGCTGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCGCTCTTTCCCAGCCGGCCATCACATCTTAGGAAGTGAGGAGCCGTCTCTGCCCGGTCACCTCATCGTCTGAGATGTTGGGTAGGGTGCTCGCATGCCCCGCCGCCCCATCTGGGATGATGAGGAGACGCCTCTGCCGGCCCGAGACCCCGTCTGAGGAGGTGAGGAGCGTCTCTGCCCGGCCCGCCCGTCTGAGAAGTGAGTGAGACCCTCTGCCCGGACAACCGCCCGTCTGAGAAGTTGAGGAGCCCCTCCGCACCCGGCCAAGCTGCCCCGTCTGAGAAGTGAGGAGCCTTCTCCGCCCGGCAGCCCACCACATCTGGAAGTGAGGACGATCTCCGCCCGGCAGCCACCCCGTCCGGAGCGGAGGTGGGGGGGAGTCAGACCCCCGCCCGAGCCAGCGCCCATCCGGGAAGGTTGAGGGTGGGGGGTGTGCAGCCCACGTCTGGCAGCCGTGCCGTCCGGAGGAGAGGTGGGGGGTTCAGCCTCCCACGCCCGGTCCAGCCGGCCCGTCCGCGTGAAGGCTGAGGGGCGCCTCATGCACCGGCCAGCCACCCTAACTTGGTGCCTTGAAAGTGAGGAGCCGTCTCTAGCCCGGCCAGCCTCACCCAGATCCGGAGGGAGGTATGGAGTGGGGTGGGCTCAGGCCCCCCCACCCGAGCAGACCGGCCCAACAATCCGCGGAGGCTGAGGTGGGGGGGAGTCAGCCCCCGCATGGCAGCCGCCAGTTCCCAGTCACCGGAAGGGAGGAGTGGGGGGTCAGCCCTCCGCCCGGACCAGCCGCCCGTCTGGAGGTGAGGGAGGCGTCTCTGCCGGCTCCCGCCCCTACTGGAAAGTGAGGAGGCCCCTCTGCCGGTCAGCGCCCCGTCCGGGAAGGGACGGTGGGGGGGTCAGCCCCGCCCAGGCCAAGCCGCGCCTGTCCGGCAGAGGACGAGATGGGGGGTCTTCCCTCTCGCGCCGGCAGCCGCTCCGTCTGGGAGGTGGGGAGCGCCTCTGCCGTCCGCCCTACTGGAACGTGAGGAGCCCCTCTGCGCCGGACCAAGCCCGCCCATCCGGAGGGAGGTAGGGGGGTCGGCCCCCCCGAGCCCGGCTTTCCAGCGCCTAGTCCAGTCCGGGAGGGAGGTGGTGGTGTCGCCCCCACCCGGCCAGCGCCCCGTCGGGAGGGAGGTGGGGGGGTCAGCAAACCCGCCGGCCAAGCCGCCCGTTGCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCCTGCCCGGCCACGCCAGCCCGTCGGCGAAGTTGGTGGTGCTCCTTGCCCGGTCCAGCCCTACTAGGAGGTGAGTCGAGCCCTCTGCCCGGCCACCACCCGTCGGGAGGTGTGCCCAATGGAGACATATGAAGGCCAGGAATGAACAAGTGGCGTTTGTGGAGTGGAAGGGGCGGGAAAGGTGGGAGAAGGGAATTCGGAAATCGGATGGTTGCCCGTGTCTGTGTAGAAAACGAACGTAGACATTGGGAGACACTTTTCATTTTGTTCTGCACTACAGCAAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACTTACACCAACCTGTGCTCCCTGAAACATGTGCTGGTGTCCGACTCAGGGTTCGACATGGTTAAGGGCGGTGTCAAAATGTGTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAAGAGTCCATCACCACTCCCTAATCTCAAGTAATCAGCGGACACAAACACTGCGGAAGTCTATGCACGGGTCTCTGCCTAGGAAAACCAGAGACTTTTTATGTTCACTTGTTTTTATCTCTGATGACCTTCTCCTCCACTTATCAGTCCCATGGACCCTGCCAAGATTCCTCCCTCTGTGTTAAACACTCAAGAATTATCAATAAAAAAATAATTAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_pbsv_9677:HG3_PB_pbsv_9423:HG2_PB_assemblyticsfalcon_26867:HG2_PB_SVrefine2Falcon1plusDovetail_11958:HG2_PB_SVrefine2PB10Xhap12_7038:HG2_PB_HySA_17424:HG2_PB_PB10Xdip_29299;NumClusterSVs=7;ExactMatchIDs=HG3_PB_pbsv_9423;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0880319;ClusterMaxSizeDiff=0.0880319;ClusterMaxEditDist=0.199211;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2483;DistBack=17864;DistForward=4186;DistMin=4186;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:109135927-109135926;PctSeqSimilarity=0.929;PctSizeSimilarity=0.9464;PctRecOverlap=0.9468;SizeDiff=133;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=94;MatchId=5441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:28:0|1:22:1:1:15:./.:0:0:0:0:0/1:27:8:0/1:81:43:.:2266:.
chr8	109813021	HG3_PB_assemblyticsfalcon_26786	ATAGTTGGTGACTTTT	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCGCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5899:HG2_PB_pbsv_9679:HG2_PB_assemblyticsfalcon_26873:HG3_PB_assemblyticsfalcon_26786:HG2_Ill_breakscan11_3989:HG3_PB_pbsv_9427:HG2_PB_SVrefine2Falcon1plusDovetail_11960;NumClusterSVs=7;ExactMatchIDs=HG3_PB_assemblyticsfalcon_26786;NumExactMatchSVs=1;ClusterMaxShiftDist=0.141883;ClusterMaxSizeDiff=0.141883;ClusterMaxEditDist=0.229195;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=332;DistBack=38;DistForward=92711;DistMin=38;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:109813037-109813020;PctSeqSimilarity=0.9706;PctSizeSimilarity=0.9071;PctRecOverlap=0.9482;SizeDiff=-34;StartDistance=0;EndDistance=15;GTMatch=0;TruScore=94;MatchId=5442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:./.:2:1:1:3:./.:0:0:0:0:0/1:36:7:0/1:18:17:.:.:.
chr8	110077381	HG2_PB_SVrefine2PBcRplusDovetail_11171	C	CACACACAGAGAGAAAGAGAGAGAGAGAACAGAAAAAAAGGTGGGGGGGAGAGAAAGAGGGAATACCATGATCAAATAAACTTGGGAAATGCTCATAATACACACACACACAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5900:HG4_PB_pbsv_9707:HG2_PB_pbsv_9680:HG2_PB_SVrefine2Falcon2Bionano_4522:HG4_PB_HySA_14076:HG3_Ill_SVrefine2DISCOVARDovetail_7227:HG4_PB_assemblyticsfalcon_26313:HG4_PB_SVrefine2Falcon1Dovetail_5935:HG3_PB_pbsv_9428:HG2_PB_assemblyticsPBcR_26126:HG3_PB_HySA_14503:HG4_Ill_GATKHCSBGrefine_6723:HG3_Ill_manta_2274:HG3_PB_SVrefine2PBcRDovetail_4415:HG2_PB_SVrefine2PBcRplusDovetail_11171:HG2_PB_SVrefine2PB10Xhap12_7040:HG2_Ill_SVrefine2DISCOVARplusDovetail_13124:HG2_Ill_GATKHCSBGrefine_6608:HG2_PB_PB10Xdip_29301:HG2_PB_SVrefine2Falcon1plusDovetail_11961;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6608:HG2_Ill_SVrefine2DISCOVARplusDovetail_13124:HG2_PB_SVrefine2PB10Xhap12_7040:HG2_PB_SVrefine2PBcRplusDovetail_11171:HG3_PB_SVrefine2PBcRDovetail_4415;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0986547;ClusterMaxSizeDiff=0.0986547;ClusterMaxEditDist=0.24;PBcalls=15;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=112;DistBack=-92;DistForward=1702;DistMin=-92;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=106;REFWIDENED=8:110077370-110077475;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5443.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:28:1/1:2:14:0:13:./.:0:0:0:0:1/1:1:47:./.:.:.:.:.:.
chr8	110079084	HG4_Ill_GATKHCSBGrefine_6724	T	TAAGAATTCTTTGTATACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29302:HG4_PB_pbsv_9708:HG3_PB_assemblyticsfalcon_26790:HG3_PB_HySA_14504:HG2_PB_assemblyticsfalcon_26877:HG3_PB_pbsv_9429:HG2_PB_SVrefine2Falcon2Bionano_4523:HG2_PB_SVrefine2Falcon1plusDovetail_11962:HG2_PB_assemblyticsPBcR_26127:HG4_PB_assemblyticsfalcon_26314:HG4_Ill_MetaSV_5394:HG2_Ill_breakscan11_3990:HG2_PB_pbsv_9681:HG4_PB_HySA_14077:HG3_PB_SVrefine2Falcon1Dovetail_5901:HG2_PB_SVrefine2PBcRplusDovetail_11172:HG2_PB_SVrefine2PB10Xhap12_7041:HG4_PB_SVrefine2Falcon1Dovetail_5936:HG4_Ill_GATKHCSBGrefine_6724:HG2_Ill_SVrefine2DISCOVARplusDovetail_13125:HG2_Ill_GATKHCSBGrefine_6609:HG2_10X_SVrefine210Xhap12_6906:HG4_PB_SVrefine2PBcRDovetail_4840:HG2_PB_HySA_17432;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6609:HG2_Ill_SVrefine2DISCOVARplusDovetail_13125:HG4_Ill_GATKHCSBGrefine_6724:HG4_Ill_MetaSV_5394;NumExactMatchSVs=4;ClusterMaxShiftDist=0.275168;ClusterMaxSizeDiff=0.275168;ClusterMaxEditDist=0.328859;PBcalls=18;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=148;DistBack=1702;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:110079085-110079100;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5444.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:45:./.:4:8:0:22:./.:0:0:0:0:1/1:0:13:./.:.:.:.:.:.
chr8	110323788	HG2_Ill_scalpel_9275	G	GTGTGTGTATATATATATATATATATATATATATATATATATATATATATA	20	PASS	ClusterIDs=HG2_PB_pbsv_9683:HG3_Ill_scalpel_9398:HG2_PB_HySA_17434:HG3_Ill_Spiral_10255:HG3_Ill_Krunchall_13147:HG3_Ill_GATKHC_15684:HG3_Ill_GATKHCSBGrefine_6508:HG3_Ill_FB_8481:HG3_Ill_150bpfermikitraw_12400:HG2_Ill_scalpel_9275:HG2_Ill_150bpfermikitraw_12345:HG4_Ill_Krunchall_13734:HG4_Ill_GATKHC_15770:HG4_Ill_GATKHCSBGrefine_6725:HG4_Ill_FB_8510:HG2_PB_assemblyticsPBcR_26129:HG2_Ill_GATKHC_15721:HG2_Ill_GATKHCSBGrefine_6611:HG2_Ill_FB_8512:HG2_PB_SVrefine2Falcon1plusDovetail_11964:HG4_PB_assemblyticsfalcon_26316:HG3_PB_SVrefine2Falcon1Dovetail_5903:HG3_PB_pbsv_9431;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12345:HG2_Ill_scalpel_9275:HG3_Ill_150bpfermikitraw_12400:HG3_Ill_FB_8481:HG3_Ill_GATKHCSBGrefine_6508:HG3_Ill_GATKHC_15684:HG3_Ill_Krunchall_13147:HG3_Ill_Spiral_10255:HG3_Ill_scalpel_9398;NumExactMatchSVs=9;ClusterMaxShiftDist=0.297872;ClusterMaxSizeDiff=0.297872;ClusterMaxEditDist=0.319149;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=86226;DistForward=25510;DistMin=25510;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=8:110323787-110323790;PctSeqSimilarity=0.9149;PctSizeSimilarity=0.84;PctRecOverlap=0.8431;SizeDiff=8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=86;MatchId=5445.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:0:29:0:19:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr8	110349299	HG3_PB_SVrefine2Falcon1Dovetail_5904	A	ATTTAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGCAT	20	PASS	ClusterIDs=HG3_PB_HySA_14507:HG3_PB_assemblyticsfalcon_26792:HG2_PB_pbsv_9684:HG3_PB_SVrefine2Falcon1Dovetail_5904:HG3_PB_pbsv_9432:HG2_PB_SVrefine2Falcon2Bionano_4525:HG2_PB_assemblyticsfalcon_26881:HG3_Ill_MetaSV_5337:HG2_PB_HySA_17435:HG2_Ill_breakscan11_3991;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5904;NumExactMatchSVs=1;ClusterMaxShiftDist=0.194958;ClusterMaxSizeDiff=0.191597;ClusterMaxEditDist=0.263514;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=311;DistBack=25510;DistForward=12325;DistMin=12325;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=8:110349300-110349310;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9936;PctRecOverlap=0.9904;SizeDiff=-2;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=5446.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:25:0|1:30:0:0:24:./.:0:0:0:0:0/1:21:10:0/1:8:20:.:.:.
chr8	110370872	HG2_PB_SVrefine2Falcon1plusDovetail_11965	C	CAAAAAATATTAAGGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGGGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCACGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3992:HG2_PB_HySA_17438:HG2_PB_pbsv_9685:HG3_PB_assemblyticsfalcon_26794:HG3_PB_pbsv_9433:HG2_PB_assemblyticsfalcon_26883:HG4_PB_assemblyticsfalcon_26318:HG2_PB_HySA_17437:HG3_PB_SVrefine2PBcRDovetail_4418:HG3_Ill_MetaSV_5338:HG2_PB_SVrefine2Falcon2Bionano_4526:HG2_PB_SVrefine2Falcon1plusDovetail_11965:HG2_Ill_MetaSV_5166:HG2_Ill_GATKHCSBGrefine_6612:HG3_PB_SVrefine2Falcon1Dovetail_5905:HG4_PB_SVrefine2Falcon1Dovetail_5937:HG3_PB_HySA_14508;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6612:HG2_Ill_MetaSV_5166:HG2_PB_SVrefine2Falcon1plusDovetail_11965:HG2_PB_SVrefine2Falcon2Bionano_4526:HG3_Ill_MetaSV_5338;NumExactMatchSVs=5;ClusterMaxShiftDist=0.161512;ClusterMaxSizeDiff=0.161512;ClusterMaxEditDist=0.209302;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=286;DistBack=-1;DistForward=16;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=8:110370873-110370886;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9965;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:33:0|1:32:0:2:34:./.:0:0:0:0:0/1:30:10:./.:.:.:.:.:.
chr8	114709718	HG2_Ill_Krunchall_13485	T	TCCAGCCATGGCTGAAAGGGGGCAACATAGAGCTCAAGCCATGGCTTCAGAGGGCACAAGCCACAAACCTTGGCAGCTTCTATGTA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3993:HG2_PB_HySA_17459:HG2_PB_pbsv_9692:HG4_PB_HySA_14097:HG4_PB_assemblyticsfalcon_26333:HG4_Ill_svaba_12327:HG4_Ill_Krunchall_13753:HG4_Ill_GATKHCSBGrefine_6730:HG4_Ill_250bpfermikitraw_13094:HG4_Ill_150bpfermikitraw_12544:HG2_Ill_svaba_12216:HG2_Ill_manta_2783:HG2_Ill_SpiralSDKrefine_17241:HG2_Ill_Krunchall_13485:HG2_Ill_GATKHCSBGrefine_6617:HG2_Ill_250bpfermikitraw_13175:HG2_Ill_150bpfermikitraw_12365:HG2_PB_assemblyticsPBcR_26152;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12365:HG2_Ill_250bpfermikitraw_13175:HG2_Ill_GATKHCSBGrefine_6617:HG2_Ill_Krunchall_13485:HG2_Ill_SpiralSDKrefine_17241:HG2_Ill_manta_2783:HG2_Ill_svaba_12216:HG4_Ill_150bpfermikitraw_12544:HG4_Ill_250bpfermikitraw_13094:HG4_Ill_GATKHCSBGrefine_6730:HG4_Ill_Krunchall_13753:HG4_Ill_svaba_12327:HG4_PB_assemblyticsfalcon_26333;NumExactMatchSVs=13;ClusterMaxShiftDist=0.185185;ClusterMaxSizeDiff=0.184049;ClusterMaxEditDist=0.234568;PBcalls=5;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=85;DistBack=-1;DistForward=10276;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=8:114709717-114709719;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:0|1:31:2:3:26:./.:0:0:0:0:0/1:28:23:./.:.:.:.:.:.
chr8	115788579	HG2_PB_PB10Xdip_29309	T	TTTTTTTTTTTTTATACTCTAAGTTTTAGGGTACATGTGCATATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGAGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGATTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGGTGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTATGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTGAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGGTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAATACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGCGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAACGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCAATTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGGTTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCTGTCTTGTGCCAGTTTTCAAAGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTATGAGCAATTTTTT	20	PASS	ClusterIDs=HG2_PB_HySA_17467:HG2_PB_pbsv_9696:HG4_PB_pbsv_9719:HG2_PB_PB10Xdip_29309:HG2_PB_assemblyticsfalcon_26907:HG2_PB_assemblyticsPBcR_26159:HG4_PB_assemblyticsfalcon_26342:HG4_PB_HySA_14107:HG2_PB_SVrefine2Falcon1plusDovetail_11974:HG2_PB_SVrefine2PB10Xhap12_7049:HG2_PB_SVrefine2PBcRplusDovetail_11184:HG4_PB_SVrefine2Falcon1Dovetail_5944:HG2_Ill_breakscan11_3995:HG4_PB_SVrefine2PBcRDovetail_4847;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_29309;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0431292;ClusterMaxSizeDiff=0.0431292;ClusterMaxEditDist=0.146528;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=2162;DistBack=1421;DistForward=72901;DistMin=1421;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:115788565-115788580;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9986;PctRecOverlap=0.9926;SizeDiff=-3;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=99;MatchId=5450.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:61:0|1:26:1:0:44:./.:0:0:0:0:0/1:22:9:0/1:66:253:.:.:.
chr8	115881769	HG3_Ill_GATKHCSBGrefine_6518	T	TAAAAACATAAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATACCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATTAAAAAAAAAATAAAAATAAATAAAAATGAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5916:HG2_PB_pbsv_9697:HG3_PB_pbsv_9445:HG2_PB_assemblyticsfalcon_26908:HG2_PB_assemblyticsPBcR_26160:HG3_PB_assemblyticsfalcon_26814:HG2_PB_HySA_17468:HG3_PB_HySA_14536:HG2_Ill_breakscan11_3996:HG2_PB_SVrefine2PBcRplusDovetail_11185:HG3_Ill_MetaSV_5351:HG3_Ill_GATKHCSBGrefine_6518:HG2_Ill_MetaSV_5177:HG2_PB_SVrefine2Falcon1plusDovetail_11975;NumClusterSVs=14;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_6518:HG3_Ill_MetaSV_5351;NumExactMatchSVs=2;ClusterMaxShiftDist=0.185535;ClusterMaxSizeDiff=0.185535;ClusterMaxEditDist=0.21485;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=336;DistBack=15568;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=8:115881770-115881781;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:22:33:0|1:20:1:3:42:./.:0:0:0:0:0/1:25:9:0/1:8:48:.:.:.
chr8	116389024	HG2_Ill_SpiralSDKrefine_17253	C	CTATATATATATAGTGGTGTGTGTGTGTATATTATATTATATATGTGTGTATATATACGTATATATATATACACACACACACCACTATA	20	PASS	ClusterIDs=HG4_PB_HySA_14109:HG3_PB_HySA_14543:HG2_PB_pbsv_9700:HG2_PB_assemblyticsPBcR_26167:HG2_PB_HySA_17475:HG2_PB_PB10Xdip_29311:HG4_Ill_manta_2386:HG4_Ill_GATKHC_15801:HG4_Ill_GATKHCSBGrefine_6743:HG3_Ill_GATKHC_15713:HG3_Ill_GATKHCSBGrefine_6522:HG2_Ill_manta_2788:HG2_Ill_SpiralSDKrefine_17253:HG2_Ill_GATKHC_15758:HG2_Ill_GATKHCSBGrefine_6627:HG2_PB_assemblyticsfalcon_26913;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6627:HG2_Ill_GATKHC_15758:HG2_Ill_SpiralSDKrefine_17253:HG2_Ill_manta_2788:HG3_Ill_GATKHCSBGrefine_6522:HG3_Ill_GATKHC_15713:HG4_Ill_GATKHCSBGrefine_6743:HG4_Ill_GATKHC_15801:HG4_Ill_manta_2386;NumExactMatchSVs=9;ClusterMaxShiftDist=0.194286;ClusterMaxSizeDiff=0.194286;ClusterMaxEditDist=0.209302;PBcalls=7;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=13;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=17;REFWIDENED=8:116389023-116389042;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5452.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:66:1/1:2:13:2:10:./.:0:0:0:0:0/1:26:24:./.:.:.:.:.:.
chr8	116410954	HG4_PB_SVrefine2PBcRDovetail_4849	T	TCCTTCCATGGTGGAAGGGTTGAAGCATCTCTCTTGGGTTTCTTTTATATGAGCATTTATCCCATTCATAGGGGCCCTGCCCTTATGACCTAATCACCTCCCAAGGACCCTACCATCTAATACTATCTCCTTGGGGGTTAGAATTTCGACATATGAATTGTGAAGGGGAATTTTTAGGCTTTAACAGCCCCCAAAATAAATAAATAAAGAACGGCCGGGTTGTTAAAGTCCAAAAATTCCCCTTCACAATTCATATGTTGAAATTCTAACCCCCAAGGAGATAGTATTAGATGGTAGGGTCCTTGGGAGGTGATTAGGTCATAAGGGCAGGACCCCTATGAATGGGATAAATGCTCATATAAAAGACCCAAGAGAGATGCCTCAAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13146:HG2_PB_pbsv_9701:HG3_PB_pbsv_9450:HG2_PB_PB10Xdip_29312:HG4_PB_pbsv_9723:HG4_PB_assemblyticsfalcon_26347:HG3_PB_assemblyticsfalcon_26821:HG2_PB_assemblyticsfalcon_26914:HG2_PB_assemblyticsPBcR_26168:HG4_PB_HySA_14110:HG3_Ill_MetaSV_5353:HG4_Ill_MetaSV_5404:HG2_Ill_MetaSV_5179:HG4_PB_SVrefine2PBcRDovetail_4849:HG4_PB_SVrefine2Falcon1Dovetail_5947:HG3_PB_SVrefine2PBcRDovetail_4432:HG3_PB_SVrefine2Falcon1Dovetail_5919:HG3_Ill_SVrefine2DISCOVARDovetail_7252:HG2_PB_SVrefine2PBcRplusDovetail_11189:HG2_PB_SVrefine2PB10Xhap12_7053:HG2_PB_SVrefine2Falcon2Bionano_4535:HG2_PB_SVrefine2Falcon1plusDovetail_11979;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13146:HG4_PB_SVrefine2PBcRDovetail_4849:HG4_PB_SVrefine2Falcon1Dovetail_5947:HG3_PB_SVrefine2PBcRDovetail_4432:HG3_PB_SVrefine2Falcon1Dovetail_5919:HG3_Ill_SVrefine2DISCOVARDovetail_7252:HG2_PB_SVrefine2PBcRplusDovetail_11189:HG2_PB_SVrefine2PB10Xhap12_7053:HG2_PB_SVrefine2Falcon2Bionano_4535:HG2_PB_SVrefine2Falcon1plusDovetail_11979;NumExactMatchSVs=10;ClusterMaxShiftDist=0.117035;ClusterMaxSizeDiff=0.117035;ClusterMaxEditDist=0.223667;PBcalls=17;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=385;DistBack=-1;DistForward=15;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=8:116410955-116410971;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:./.:0:1:0:1:./.:0:0:0:0:1/1:1:25:1/1:3:81:.:.:.
chr8	117047005	HG4_Ill_MetaSV_5406	T	TAAAGACATAACCAATTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACATGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_14117:HG2_PB_assemblyticsfalcon_26923:HG2_PB_pbsv_9705:HG4_PB_pbsv_9727:HG3_PB_assemblyticsfalcon_26829:HG4_PB_assemblyticsfalcon_26355:HG4_PB_SVrefine2PBcRDovetail_4851:HG4_Ill_MetaSV_5406:HG4_Ill_GATKHCSBGrefine_6748:HG3_PB_SVrefine2Falcon1Dovetail_5921:HG4_PB_SVrefine2Falcon1Dovetail_5949:HG2_PB_SVrefine2Falcon1plusDovetail_11982;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5921:HG4_Ill_GATKHCSBGrefine_6748:HG4_Ill_MetaSV_5406:HG4_PB_SVrefine2PBcRDovetail_4851;NumExactMatchSVs=4;ClusterMaxShiftDist=0.138182;ClusterMaxSizeDiff=0.138182;ClusterMaxEditDist=0.193784;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=276;DistBack=6958;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=8:117047006-117047019;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5454.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:23:0|1:48:1:2:21:./.:0:0:0:0:0/1:22:6:./.:.:.:.:.:.
chr8	117762093	HG2_PB_SVrefine2PBcRplusDovetail_11194	G	GGAGGGACTGCTACATTACAGATACAGAGGAAGTGATGAAACAGGTCTAAAGGTAGGAAAGGAAGGGTTCAAAAATACAAGAAAAATTGGTCTTGGCCACTATCAATGTGCCAGGAAGGAACAAATGTGTTAAAACATCAGGCTAAACATAGGATGAGATTAATCTCTGGGTTCATCTACATCTATATATGACTGAGAATGGTCATGAGAGTCGGGACTGGGTTCTACCTTGCTCACCTATATAATATCTTATATAGGTTACTGCAATATACCCCAGCATGTAGCAGGGCTAGACCTGGCATGTGGTCGGCAATCAATAAATATTTGTTAAATGAATGAAGAACAGAATACATCTGGAGTATACAGATTCAAGTTAAACTATATGGAGAATTTTTAAAAAAACAGAGTAAGTCGATTAAGTCACATTTTTTATTCCTTCTATCAAGTTCTTTCAGTGTTAACCATTCTCCCATTTCACAAGGAAGTACCAAGCACTGACTCTTGCAAGGTACACAATAAGAGACACATTGACAAGTCTACTGGAATGGACAATTAAAAGATTATTGAGAGAGAGTGTTTCAACTTAGTGGACCGACAAAAATGGGTATCCAGCCATAATAAATGTAAGAGAGATGTGAAGCAATGAGACTCCTCATAAATCGCTAGGACAAATGTGAAATGGTACAAATACTTAGGAAAATAATTTTACATTATGGTACTTAGTATAACTGTCCAGGAGCATCCCTAAGTCCTACCAATCATGGTATGAGACAGACATATCAAGACTCAAAACATAGGAGAATATAAACTATGATTTAATTCATATTTGTTCACACAGACAGGTGAAAATAATCAAATTGTTTAATACTCCATGTGGTAAAGCTACAAAAGAATCATTAAAACAAAGCTCACCAATAGTGATTCACACAGGGAGAGAAGGGATTGGAGGAAGGCATGAAAAAGGGGAAGGGGCTTCAAAGATACTTGTAATGTTCTGTTTCTCAGGTTGAATAGTGGGTAACTGGATGTTTAAACACTATCTTCCATGTATGACATTTTGATATGCCTTACAGTTCTTTGCTGATGTTATCAATAATCTTTAAAAAGTAATAATAATAATTCAGGGAGTTTGTGGTGGCAGATTCTAACAGCAACAGAGTTTTAGAAAGTATAGAAGACTACAAATATAAAATAGTTCTTTAACCATTAACTTAAAGAGGAAAAAAAAGCCAGGGCAAAAAAATGGAACACAGGGAGCTAAAAGAGACAATGCTGAAAATTTTAATATGGGAAAGTCCTGATGATGTTTACGTGCTAAGGGAACATACAGTTGACCCTTAAACAATATGGGCTTGAACTGCACAGGTTCAGGGATGTGAACCTTGCATACAGGAAAGGCCAACTTTTCCTATACGTGAGTTCCACAAGGATCCATAGGGCCAACTGTAGGACTTCAGTATGCCTGGATTTTGAATACATAGGGGTCCTGGTTTCCCTGTGGATATT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11986:HG2_PB_pbsv_9709:HG4_PB_HySA_14121:HG4_PB_HySA_14120:HG2_PB_HySA_17485:HG3_PB_HySA_14551:HG2_PB_PB10Xdip_29325:HG3_PB_SVrefine2PBcRDovetail_4435:HG3_PB_SVrefine2Falcon1Dovetail_5923:HG4_Ill_MetaSV_5408:HG2_PB_SVrefine2Falcon2Bionano_4537:HG4_PB_SVrefine2Falcon1Dovetail_5951:HG3_Ill_MetaSV_5355:HG2_PB_SVrefine2PBcRplusDovetail_11194:HG2_PB_SVrefine2PB10Xhap12_7059:HG2_Ill_MetaSV_5182:HG4_PB_SVrefine2PBcRDovetail_4853;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_5182:HG2_PB_SVrefine2PB10Xhap12_7059:HG2_PB_SVrefine2PBcRplusDovetail_11194:HG3_Ill_MetaSV_5355;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0468445;ClusterMaxSizeDiff=0.0455433;ClusterMaxEditDist=0.190354;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=1505;DistBack=1539;DistForward=429;DistMin=429;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=434;REFWIDENED=8:117762094-117762527;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:1/1:3:37:0:28:./.:0:0:0:0:1/1:0:17:./.:15:149:.:1585:.
chr8	118623830	HG3_PB_assemblyticsfalcon_26838	AACATTTCAGTTTTCTTT	TTTTTTTTTTTTTTTGTAAAGGACATATCATATTTATTCATACACATGCTGGAATTATTGGTGCAGACATTTAAATACATTTTCTTTGAGAAAGTCCTTTTTTTTTTTTTTTTTGATGGAGTTTCCCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCAATCTCAGCTCACAACAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAATTTTTTTTATTTTTAGTAGAGACGGGGTTTCTCCGTGTTGGTCAGGCTGGTCTTGAACTCCTGATCTCAGGTGATCTGCCCACCTTGGCCTGCCACAGTGCTGGGATTACAGTCGTGAGCCACCACAGCTGGCCTGGGAAAGTCCATTCTTTTTTCTTTTTTTTTTTTTTTAAATTTATTTTTTTATTGAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCCGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACTGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCATCCGATTTCTCAATCCTTTCCCCACCCTTCCCGCATTTCTATTCCACAATGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCAGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCCGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCCGACCCCCCCCCCTCCCGGACGGGGCGGCTGGCCGGCGCGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCACCTCCCTCCCGGACGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGCTGGCCGGGCGGAGGGCTGAGCCCCCATCTCCCTCCCGGACGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCTGGGCGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCGCGGGCGGCTGGCCGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCCGACCCCCCACCTCCCTCCCGGACGGGCGGCTGGCCGGGCAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCTCACCTCCCAGACGGGCGGCTGGCCGGGCGGAGGCTGACCCCCCACCTCCCTCCCGGACAGGGCGGCTGCCGGGCGGGGGGCTGACCCCCCTACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGACTGACCCCCCATCTCCTCTCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCGGGCAGAGGCGCCCTCACCGCCCGGACGGGGCGGCTGGCCGGGCGGGGGCCGACCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCAGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGCGGGGGACCACCTCCCTCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCACCTCCCGGACAGGGCGGCTGGCTGGGCGGGGGGCTGACCCCCCCACCTCCTCCCGGACGGGGCGCTGGCCGGGCGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGCGGGGGGCTGACCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTTACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCAGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGCTCCTTGCCCTCGGCCCCGCGGGGCCCGTCCGCTCCTCCAGCCGCTGCCTCCCGGGCGGCGCTCCGGCGCGGCGGCAAAGACTGAGACAGCTCCGCTGCCCGCTGAACTCCATCCTCCGGCGGTCGGGCGGCGGCGGCTGCGGTCGGTCGCGGCAGCGGCTCCGCTTCATATCTGCAGCTGGGGCCCGCGGGCGTCAGCGCCGCGACTGTCCTGGCTCCGCACTGCCCCGGGCCGCAGCGCAGCCGCGCCAACCACCAGCCGCGGCCACCATGGCCGGACGGGCTCCCTAAGCCACCGACCCCAGCCCGCGGCGCCTTCGACCCTTCTGGGGCCTCCGGCGCCGCGACCTCCTCTGCCTGAAATTTCTTTTTTCTTTTCCTTTTATTTTATTTTATTTTTTGAGACGGAGTCTTGCTCTGTTGTCTGGGTGGAGTGCAGTGGTGCAATCTCGCTCACTGCC	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_26184:HG4_PB_pbsv_9736:HG2_PB_pbsv_9713:HG4_PB_HySA_14132:HG2_PB_assemblyticsfalcon_26935:HG3_PB_assemblyticsfalcon_26838:HG2_Ill_breakscan11_3997:HG2_PB_PB10Xdip_29330:HG4_PB_SVrefine2PBcRDovetail_4857:HG4_PB_SVrefine2Falcon1Dovetail_5957:HG2_PB_SVrefine2Falcon2Bionano_4540:HG2_PB_SVrefine2PBcRplusDovetail_11199:HG3_PB_SVrefine2Falcon1Dovetail_5927:HG2_PB_SVrefine2PB10Xhap12_7065:HG2_PB_SVrefine2Falcon1plusDovetail_11990:HG4_PB_HySA_14131:HG4_PB_assemblyticsfalcon_26363;NumClusterSVs=17;ExactMatchIDs=HG3_PB_assemblyticsfalcon_26838;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0690216;ClusterMaxSizeDiff=0.0690216;ClusterMaxEditDist=0.158007;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=3782;DistBack=3069;DistForward=74;DistMin=74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:118623848-118623829;PctSeqSimilarity=0.9838;PctSizeSimilarity=0.9645;PctRecOverlap=0.9691;SizeDiff=-139;StartDistance=0;EndDistance=17;GTMatch=0;TruScore=97;MatchId=5457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:42:0|1:28:5:2:18:./.:0:0:0:0:./.:42:4:0/1:126:196:.:4232:.
chr8	119009546	HG3_PB_assemblyticsfalcon_26847	ATATATAATTTTTT	TTGAGACGGAGTCTCGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCGCCCGGCCA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_29333:HG4_PB_pbsv_9741:HG4_PB_assemblyticsfalcon_26368:HG2_PB_pbsv_9717:HG2_PB_HySA_17500:HG3_PB_SVrefine2Falcon1Dovetail_5930:HG2_PB_SVrefine2Falcon1plusDovetail_11992:HG4_PB_HySA_14139:HG3_PB_SVrefine2Falcon1Dovetail_5929:HG3_PB_assemblyticsfalcon_26847:HG2_PB_SVrefine2Falcon2Bionano_4542:HG2_PB_SVrefine2PB10Xhap12_7069:HG3_PB_assemblyticsfalcon_26846:HG4_PB_SVrefine2PBcRDovetail_4860:HG2_PB_assemblyticsfalcon_26942:HG4_PB_SVrefine2Falcon1Dovetail_5960;NumClusterSVs=16;ExactMatchIDs=HG3_PB_assemblyticsfalcon_26847;NumExactMatchSVs=1;ClusterMaxShiftDist=0.246795;ClusterMaxSizeDiff=0.246795;ClusterMaxEditDist=0.314103;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=266;DistBack=16592;DistForward=44344;DistMin=16592;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:119009560-119009545;PctSeqSimilarity=0.8938;PctSizeSimilarity=0.8036;PctRecOverlap=0.8459;SizeDiff=-65;StartDistance=3;EndDistance=16;GTMatch=0;TruScore=84;MatchId=5458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:23:0|1:25:1:0:17:./.:0:0:0:0:0/1:41:7:./.:.:.:.:.:.
chr8	119721698	HG4_PB_pbsv_9744	T	TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTATTATTACTCTATAGTTTCTAGGCGGTAACATGGCACATTTGCAGGTTAATTACATATGGTACATTTGCCTGCTGTGCGCTTGCACCCACTACTGTGCTCACTCTAGCATTAGGTATATCTCCCAATTGCTATTATCCCTCCCCCCCTCTCCCCCGACCCCACACAGTCCCCAGAGTGTGATTTCCCCTTCTGTGTCCATGTATCTCACTTGACTCAATTCCACCTATATGATGAGAATATCGCGGGTTTGTTATTTTTCTCTCGATAGTTACTAGAATCATGTTTTTTCCAATTTCATTCCATTGTCCCTACAAAGATATGAACTCATCATTTTTATGGCCTGCATAGTATTCCATGTGTATATGTTGCCACATTCTTTAATCCAGTTCTATTCATTGTTGGACCTTTGGAAGACAATTTTTGCAAACCCTACTCACTCTGACAAAGCTAATATCCAGGAATCTACAATGAACTCAAACAAATTCTAACAATGAAAAAAACAAACTAACCCCATCCAAAAATTGCGAAAGACATGAACAGGACACTTCTTCAACAAGAAGACATTTATGCAGCCAAAAACACATGAAAGAAATGACGCTCATCAGCACTGGCCATCAGAGAGAAATGCAAATCAAAACCACTCTGAGATATCATCTCACACCAGTTTAGATATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGTGGACGAGCGATGCGAAGGAAATACTACGGCCGAACACTTCTTTACACTGTTGTGGACGGTAAACTAGTTCAACCATGTGGATCAGTGTGGCGATTTCCTCAGGATCTAGAACAAAGAACATACCATGTGACCCAGCCATCCCATTACTGGTATATACCCAAATGAGTACTAAATCATGCTGCATAAAAGACAGCATGCCAACACTTATTTTATGTGCGACTATTCCAATAGCAAAGACTATGGAACCAATCCAGAAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11996:HG2_PB_PB10Xdip_29338:HG2_PB_SVrefine2PB10Xhap12_7072:HG2_PB_pbsv_9720:HG2_PB_HySA_17509:HG4_PB_pbsv_9744:HG2_PB_assemblyticsPBcR_26197:HG2_PB_assemblyticsfalcon_26947:HG2_PB_HySA_17508:HG2_PB_SVrefine2PBcRplusDovetail_11204;NumClusterSVs=10;ExactMatchIDs=HG4_PB_pbsv_9744;NumExactMatchSVs=1;ClusterMaxShiftDist=0.102072;ClusterMaxSizeDiff=0.102072;ClusterMaxEditDist=0.23369;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1013;DistBack=67811;DistForward=20357;DistMin=20357;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9244;REFWIDENED=8:119721690-119712560;PctSeqSimilarity=0.9299;PctSizeSimilarity=0.9773;PctRecOverlap=0.9783;SizeDiff=23;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=96;MatchId=5459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:34:1|0:1:28:26:0:./.:0:0:0:0:0/1:26:17:0/1:44:19:.:.:.
chr8	121360412	HG3_PB_HySA_14577	A	ATATATATATGAAGCATATATAAAGCATAATATATATGTATATATATGAAGCATATATAAAGCATATATATATG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4446:HG3_PB_pbsv_9471:HG3_PB_HySA_14577:HG2_PB_pbsv_9726:HG2_PB_SVrefine2Falcon2Bionano_4549;NumClusterSVs=5;ExactMatchIDs=HG3_PB_HySA_14577;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0680272;ClusterMaxEditDist=0.266667;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=73;DistBack=9617;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=155;REFWIDENED=8:121360409-121360563;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.9863;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:30:0|1:24:2:2:34:./.:0:0:0:0:0/1:35:12:./.:.:.:.:.:.
chr8	122155277	HG3_Ill_MetaSV_5365	T	TAAAAAAAATTGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_9476:HG4_PB_assemblyticsfalcon_26388:HG2_PB_pbsv_9731:HG3_PB_assemblyticsfalcon_26867:HG2_PB_assemblyticsfalcon_26965:HG3_PB_HySA_14583:HG4_PB_SVrefine2Falcon1Dovetail_5973:HG3_PB_SVrefine2Falcon1Dovetail_5943:HG2_PB_SVrefine2Falcon1plusDovetail_12005:HG3_Ill_MetaSV_5365:HG2_Ill_MetaSV_5193:HG2_PB_HySA_17530;NumClusterSVs=12;ExactMatchIDs=HG3_Ill_MetaSV_5365;NumExactMatchSVs=1;ClusterMaxShiftDist=0.106918;ClusterMaxSizeDiff=0.106918;ClusterMaxEditDist=0.15949;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=6139;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=8:122155278-122155287;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5461.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:31:0|1:18:2:1:27:./.:0:0:0:0:0/1:32:14:0/1:7:36:.:.:.
chr8	122663714	HG3_Ill_GATKHCSBGrefine_6542	T	TCTCTACTAAAAATACAAAAAAAAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTCTCAGTTACTTGGGAGGCTGAGGCAGGAGAGTGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGCGACAGAGTGACTCCATCTCACACACACACACACACACACACACACACACACACACGAAAGAAATAGTTGTTTTCTTTCTTCCCTATCGTAATTTACCCAGGGAAATTAACAGAGTTCTCATCTGGTTTTCA	20	PASS	ClusterIDs=HG4_Ill_Spiral_808:HG2_PB_pbsv_9734:HG3_PB_pbsv_9480:HG2_PB_HySA_17537:HG4_PB_pbsv_9759:HG3_PB_HySA_14592:HG4_PB_HySA_14156:HG2_PB_SVrefine2Falcon1plusDovetail_12006:HG4_PB_assemblyticsfalcon_26390:HG4_PB_SVrefine2Falcon1Dovetail_5974:HG3_PB_SVrefine2PBcRDovetail_4451:HG3_Ill_manta_2287:HG3_Ill_MetaSV_5366:HG3_Ill_GATKHCSBGrefine_6542:HG2_Ill_SVrefine2DISCOVARplusDovetail_13174:HG2_Ill_MetaSV_5194:HG2_Ill_GATKHCSBGrefine_6651:HG4_Ill_GATKHCSBGrefine_6770:HG3_Ill_SVrefine2DISCOVARDovetail_7278:HG3_Ill_Spiral_10314:HG2_Ill_Spiral_696;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6651:HG2_Ill_MetaSV_5194:HG2_Ill_SVrefine2DISCOVARplusDovetail_13174:HG3_Ill_GATKHCSBGrefine_6542:HG3_Ill_MetaSV_5366:HG3_Ill_manta_2287:HG3_PB_SVrefine2PBcRDovetail_4451:HG4_PB_SVrefine2Falcon1Dovetail_5974:HG4_PB_assemblyticsfalcon_26390;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0732984;ClusterMaxEditDist=0.215852;PBcalls=10;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=284;DistBack=-1;DistForward=3482;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:122663715-122663714;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5462.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:26:0|1:32:1:2:32:./.:0:0:0:0:0/1:13:17:./.:.:.:.:.:.
chr8	122731007	HG2_Ill_MetaSV_5195	T	TCCATCTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_3998:HG2_PB_pbsv_9736:HG4_PB_assemblyticsfalcon_26393:HG3_PB_assemblyticsfalcon_26875:HG2_PB_HySA_17540:HG4_PB_pbsv_9761:HG4_PB_SVrefine2PBcRDovetail_4873:HG2_PB_SVrefine2Falcon1plusDovetail_12008:HG4_PB_SVrefine2Falcon1Dovetail_5975:HG4_Ill_MetaSV_5420:HG4_Ill_GATKHCSBGrefine_6772:HG2_Ill_MetaSV_5195:HG3_PB_SVrefine2Falcon1Dovetail_5945:HG2_PB_SVrefine2Falcon2Bionano_4555:HG4_PB_HySA_14158;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_MetaSV_5195:HG4_Ill_GATKHCSBGrefine_6772:HG4_Ill_MetaSV_5420:HG4_PB_SVrefine2Falcon1Dovetail_5975;NumExactMatchSVs=4;ClusterMaxShiftDist=0.148485;ClusterMaxSizeDiff=0.148485;ClusterMaxEditDist=0.19697;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=-1;DistForward=12904;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:122731008-122731020;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:28:./.:18:9:18:11:./.:0:0:0:0:0/1:22:8:0/1:8:42:.:.:.
chr8	122949034	HG3_PB_SVrefine2Falcon1Dovetail_5946	T	TTATATATTATATTATATATATATAATATAATATAATATATATATTTATATTATTATATATATATATATATATATATATATAATATATTATATATAATATATTATATATAATATATTATATAAAATATATTA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5946:HG2_PB_SVrefine2Falcon2Bionano_4556:HG3_PB_HySA_14600:HG3_PB_SVrefine2PBcRDovetail_4452:HG2_PB_pbsv_9738:HG3_PB_pbsv_9481:HG4_PB_SVrefine2Falcon1Dovetail_5976;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5946;NumExactMatchSVs=1;ClusterMaxShiftDist=0.134328;ClusterMaxSizeDiff=0.134328;ClusterMaxEditDist=0.221374;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=131;DistBack=1130;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=80;REFWIDENED=8:122949035-122949114;PctSeqSimilarity=0.9598;PctSizeSimilarity=0.9776;PctRecOverlap=0.7778;SizeDiff=-3;StartDistance=-28;EndDistance=-28;GTMatch=0;TruScore=90;MatchId=5464.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:41:0|1:32:3:4:39:./.:0:0:0:0:0/1:26:11:./.:.:.:.:.:.
chr8	124680169	HG2_PB_SVrefine2Falcon2Bionano_4560	G	GAAAAGAACTCAGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29353:HG4_PB_pbsv_9769:HG2_PB_pbsv_9745:HG3_PB_assemblyticsfalcon_26896:HG4_PB_assemblyticsfalcon_26409:HG2_PB_assemblyticsPBcR_26243:HG2_PB_HySA_17559:HG2_Ill_breakscan11_3999:HG3_PB_SVrefine2Falcon1Dovetail_5953:HG4_PB_SVrefine2Falcon1Dovetail_5981:HG3_PB_SVrefine2PBcRDovetail_4456:HG2_PB_SVrefine2PBcRplusDovetail_11218:HG2_PB_SVrefine2PB10Xhap12_7083:HG2_PB_SVrefine2Falcon2Bionano_4560:HG2_PB_SVrefine2Falcon1plusDovetail_12013:HG4_Ill_GATKHCSBGrefine_6784:HG2_Ill_GATKHCSBGrefine_6660:HG2_10X_SVrefine210Xhap12_6961:HG2_Ill_MetaSV_5198:HG3_PB_HySA_14619:HG3_PB_pbsv_9487;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4560:HG2_PB_SVrefine2PB10Xhap12_7083:HG2_PB_SVrefine2PBcRplusDovetail_11218;NumExactMatchSVs=3;ClusterMaxShiftDist=0.136223;ClusterMaxSizeDiff=0.136223;ClusterMaxEditDist=0.231125;PBcalls=16;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=327;DistBack=8985;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=8:124680170-124680183;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:./.:0:14:0:2:./.:0:0:0:0:1/1:0:23:1/1:0:62:.:1001:.
chr8	125154077	HG2_Ill_Krunchall_13570	G	GCAGGCGGCAGGACCTGAGCCCTGCCCCACAGGGAGGCAGCTGCTAGCCAGCTATGGGAACGGAACAGCGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4001:HG2_PB_pbsv_9749:HG4_PB_pbsv_9773:HG3_PB_pbsv_9491:HG2_PB_HySA_17562:HG4_PB_HySA_14170:HG4_PB_assemblyticsfalcon_26413:HG4_Ill_manta_2397:HG4_Ill_Krunchall_13837:HG4_Ill_GATKHC_15870:HG4_Ill_GATKHCSBGrefine_6787:HG4_Ill_Cortex_3716:HG4_Ill_250bpfermikitraw_13163:HG4_Ill_150bpfermikitraw_12620:HG3_PB_assemblyticsfalcon_26900:HG3_Ill_manta_2290:HG3_Ill_Krunchall_13248:HG3_Ill_GATKHCSBGrefine_6551:HG3_Ill_Cortex_3747:HG3_Ill_250bpfermikitraw_12871:HG2_Ill_manta_2804:HG2_Ill_SpiralSDKrefine_17300:HG2_Ill_Krunchall_13570:HG2_Ill_GATKHC_15841:HG2_Ill_GATKHCSBGrefine_6662:HG2_Ill_Cortex_9072:HG2_Ill_250bpfermikitraw_13255:HG2_Ill_150bpfermikitraw_12442;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12442:HG2_Ill_250bpfermikitraw_13255:HG2_Ill_Cortex_9072:HG2_Ill_GATKHCSBGrefine_6662:HG2_Ill_GATKHC_15841:HG2_Ill_Krunchall_13570:HG2_Ill_SpiralSDKrefine_17300:HG2_Ill_manta_2804:HG3_Ill_250bpfermikitraw_12871:HG3_Ill_Cortex_3747:HG3_Ill_GATKHCSBGrefine_6551:HG3_Ill_Krunchall_13248:HG3_Ill_manta_2290:HG3_PB_assemblyticsfalcon_26900:HG4_Ill_150bpfermikitraw_12620:HG4_Ill_250bpfermikitraw_13163:HG4_Ill_Cortex_3716:HG4_Ill_GATKHCSBGrefine_6787:HG4_Ill_GATKHC_15870:HG4_Ill_Krunchall_13837:HG4_Ill_manta_2397:HG4_PB_assemblyticsfalcon_26413;NumExactMatchSVs=22;ClusterMaxShiftDist=0.056338;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.167832;PBcalls=7;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=8:125154076-125154079;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5466.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:25:0|1:37:0:0:24:./.:0:0:0:0:0/1:25:21:./.:.:.:.:.:.
chr8	125495193	HG2_PB_SVrefine2PBcRplusDovetail_11221	A	ATATATAATATATATATATTATTTAAATATATATATATTTAAAAATATATATATTAAAAATATATATATATATTTAAATATATATATATTTAAAAATATATTATTAAAAATATATATATATTATTTAAATATATATATATTTAAAAATATATATATTAAAAATATATATATTTTAAATATGTATATTTAAATTATATAATTTAAATATATATTAATATACATATTTTAATATATATAATTTAATATATATCTTTAAATATATATTTAAAGATATATATTAAATTATATATATTAAAATATGTATATTAATATATATTTAAAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4564:HG4_PB_HySA_14182:HG2_PB_PB10Xdip_29363:HG3_PB_pbsv_9494:HG2_PB_SVrefine2PBcRplusDovetail_11221:HG2_PB_SVrefine2PB10Xhap12_7086:HG2_PB_HySA_17573:HG3_PB_HySA_14627:HG4_PB_pbsv_9776:HG4_PB_SVrefine2Falcon1Dovetail_5984:HG4_PB_SVrefine2PBcRDovetail_4878:HG3_PB_SVrefine2PBcRDovetail_4459:HG2_PB_SVrefine2Falcon1plusDovetail_12017:HG3_PB_SVrefine2Falcon1Dovetail_5956;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_11221;NumExactMatchSVs=1;ClusterMaxShiftDist=0.33241;ClusterMaxSizeDiff=0.33241;ClusterMaxEditDist=0.34349;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=321;DistBack=-170;DistForward=0;DistMin=-170;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=177;REFWIDENED=8:125495194-125495370;PctSeqSimilarity=0.9665;PctSizeSimilarity=0.9626;PctRecOverlap=0.4798;SizeDiff=12;StartDistance=-161;EndDistance=-161;GTMatch=1;TruScore=80;MatchId=5467.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:65:1/1:1:34:0:29:./.:0:0:0:0:0/1:4:6:./.:1:14:.:.:.
chr8	125614429	HG2_Ill_150bpfermikitraw_12447	C	CATATATATATATATATATACACACACACACACATATATATATATATATAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13184:HG2_Ill_breakscan11_4002:HG4_Ill_scalpel_9111:HG4_Ill_GATKHC_15876:HG4_Ill_GATKHCSBGrefine_6789:HG4_Ill_FB_8569:HG4_Ill_150bpfermikitraw_12625:HG2_Ill_scalpel_9353:HG2_Ill_GATKHC_15847:HG2_Ill_GATKHCSBGrefine_6666:HG2_Ill_FB_8579:HG2_Ill_150bpfermikitraw_12447:HG2_Ill_SpiralSDKrefine_17305:HG2_PB_HySA_17574:HG2_PB_pbsv_9753;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12447:HG2_Ill_FB_8579:HG2_Ill_GATKHCSBGrefine_6666:HG2_Ill_GATKHC_15847:HG2_Ill_scalpel_9353:HG4_Ill_150bpfermikitraw_12625:HG4_Ill_FB_8569:HG4_Ill_GATKHCSBGrefine_6789:HG4_Ill_GATKHC_15876:HG4_Ill_scalpel_9111;NumExactMatchSVs=10;ClusterMaxShiftDist=0.134615;ClusterMaxSizeDiff=0.0970874;ClusterMaxEditDist=0.230769;PBcalls=2;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=0;DistForward=10;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=8:125614420-125614448;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5468.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:28:0|1:29:1:1:26:./.:0:0:0:0:0/1:15:18:./.:.:.:.:.:.
chr8	125729652	HG2_PB_HySA_17576	T	TCTTGAACCTGGGAGGCAGAGGTGTGCAGTGAGCCAAGATTGCACCACTGCACACTCCGGCCTGGGGGACAGATACTCGGGAGGCTGAGGCAGGAGAATCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4565:HG2_PB_pbsv_9754:HG2_PB_HySA_17576:HG4_PB_pbsv_9778;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_17576;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0591133;ClusterMaxSizeDiff=0.0295567;ClusterMaxEditDist=0.264706;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=100;DistBack=100362;DistForward=160;DistMin=160;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=297;REFWIDENED=8:125729625-125729921;PctSeqSimilarity=0.995;PctSizeSimilarity=0.99;PctRecOverlap=0.9802;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:24:0|1:18:2:0:21:./.:0:0:0:0:0/1:17:3:./.:.:.:.:.:.
chr8	125767433	HG2_PB_SVrefine2Falcon2Bionano_4566	C	CCAAAGTAGTGTAGGCCTCAGGCCTGGGTTCCAGATCTATTCCAGATCAAAGTAGTGTAGGCCTCGGGCCTGGGTTCCAGATCTATTCCAGAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13185:HG2_PB_pbsv_9755:HG4_PB_HySA_14184:HG2_PB_HySA_17578:HG4_PB_pbsv_9779:HG4_Ill_Krunchall_13846:HG4_Ill_250bpfermikitraw_13169:HG3_Ill_Krunchall_13253:HG3_Ill_250bpfermikitraw_12874:HG2_Ill_Krunchall_13576:HG2_Ill_250bpfermikitraw_13261:HG2_PB_PB10Xdip_29365:HG4_Ill_SVrefine2DISCOVARDovetail_7063:HG3_PB_SVrefine2Falcon1Dovetail_5957:HG3_Ill_SVrefine2DISCOVARDovetail_7292:HG2_PB_SVrefine2PBcRplusDovetail_11222:HG2_PB_SVrefine2PB10Xhap12_7087:HG2_PB_SVrefine2Falcon2Bionano_4566:HG2_PB_SVrefine2Falcon1plusDovetail_12018;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13185:HG4_Ill_SVrefine2DISCOVARDovetail_7063:HG3_PB_SVrefine2Falcon1Dovetail_5957:HG3_Ill_SVrefine2DISCOVARDovetail_7292:HG2_PB_SVrefine2PBcRplusDovetail_11222:HG2_PB_SVrefine2PB10Xhap12_7087:HG2_PB_SVrefine2Falcon2Bionano_4566:HG2_PB_SVrefine2Falcon1plusDovetail_12018;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0534759;ClusterMaxSizeDiff=0.0534759;ClusterMaxEditDist=0.178947;PBcalls=10;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=92;DistBack=7729;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=86;REFWIDENED=8:125767434-125767519;PctSeqSimilarity=0.9955;PctSizeSimilarity=1;PctRecOverlap=0.7957;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=93;MatchId=5470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:3:13:0:25:./.:0:0:0:0:1/1:1:41:./.:.:.:.:.:.
chr8	125889957	HG3_Ill_MetaSV_5367	T	TTTCTTCTGATCTTTTTTTTTTTTTTTTTTTTTTCTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4003:HG2_PB_pbsv_9757:HG3_PB_pbsv_9497:HG2_PB_assemblyticsPBcR_26259:HG4_PB_assemblyticsfalcon_26420:HG2_PB_HySA_17581:HG2_PB_HySA_17580:HG3_PB_HySA_14629:HG2_PB_SVrefine2Falcon2Bionano_4567:HG4_PB_SVrefine2PBcRDovetail_4880:HG3_PB_SVrefine2Falcon1Dovetail_5958:HG3_Ill_MetaSV_5367:HG2_PB_SVrefine2PBcRplusDovetail_11224:HG2_PB_SVrefine2PB10Xhap12_7089:HG2_Ill_MetaSV_5201:HG2_Ill_GATKHCSBGrefine_6669:HG4_Ill_MetaSV_5424:HG4_Ill_GATKHCSBGrefine_6792:HG3_PB_SVrefine2PBcRDovetail_4461:HG2_PB_SVrefine2Falcon1plusDovetail_12019:HG2_PB_PB10Xdip_29366:HG4_PB_SVrefine2Falcon1Dovetail_5986:HG2_10X_SVrefine210Xhap12_6966:HG4_PB_HySA_14186;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6669:HG2_Ill_MetaSV_5201:HG2_PB_SVrefine2PB10Xhap12_7089:HG2_PB_SVrefine2PBcRplusDovetail_11224:HG3_Ill_MetaSV_5367:HG3_PB_SVrefine2Falcon1Dovetail_5958:HG4_PB_SVrefine2PBcRDovetail_4880;NumExactMatchSVs=7;ClusterMaxShiftDist=0.137324;ClusterMaxSizeDiff=0.137324;ClusterMaxEditDist=0.183099;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=285;DistBack=34130;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:125889958-125889970;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5471.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:75:1/1:0:28:1:31:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr8	127086928	HG2_10X_SVrefine210Xhap12_6978	G	GTCACAAGGTCAAGTCCTTTTCACCTTGCATCTCCTTCTGTCTGATCCTTCTTCCTCTTACAGAGTGGAATCCATGAGGTTCCATGGGACCCACCCAGATAATCCCAGTTAATC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6978:HG2_PB_pbsv_9762:HG3_PB_pbsv_9504:HG4_PB_assemblyticsfalcon_26430:HG2_PB_assemblyticsPBcR_26270:HG2_PB_PB10Xdip_29371:HG2_Ill_breakscan11_4004:HG4_PB_pbsv_9787:HG2_PB_HySA_17589:HG4_PB_SVrefine2PBcRDovetail_4884:HG4_PB_SVrefine2Falcon1Dovetail_5990:HG4_Ill_svaba_12408:HG4_Ill_manta_2403:HG4_Ill_SVrefine2DISCOVARDovetail_7068:HG4_Ill_MetaSV_5429:HG4_Ill_GATKHCSBGrefine_6797:HG4_Ill_Cortex_3720:HG4_Ill_250bpfermikitraw_13180:HG4_Ill_150bpfermikitraw_12635:HG3_PB_SVrefine2PBcRDovetail_4466:HG3_PB_SVrefine2Falcon1Dovetail_5962:HG3_Ill_svaba_12424:HG3_Ill_manta_2294:HG3_Ill_Spiral_10353:HG3_Ill_SVrefine2DISCOVARDovetail_7305:HG3_Ill_MetaSV_5374:HG3_Ill_GATKHCSBGrefine_6560:HG3_Ill_Cortex_3752:HG2_PB_SVrefine2PBcRplusDovetail_11229:HG2_PB_SVrefine2PB10Xhap12_7097:HG2_PB_SVrefine2Falcon2Bionano_4572:HG2_PB_SVrefine2Falcon1plusDovetail_12024:HG2_Ill_svaba_12309:HG2_Ill_manta_2808:HG2_Ill_SpiralSDKrefine_17319:HG2_Ill_SVrefine2DISCOVARplusDovetail_13193:HG2_Ill_MetaSV_5205:HG2_Ill_GATKHCSBGrefine_6675:HG2_Ill_Cortex_9080:HG2_Ill_250bpfermikitraw_13275:HG2_Ill_150bpfermikitraw_12461;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6978:HG4_PB_SVrefine2PBcRDovetail_4884:HG4_PB_SVrefine2Falcon1Dovetail_5990:HG4_Ill_svaba_12408:HG4_Ill_manta_2403:HG4_Ill_SVrefine2DISCOVARDovetail_7068:HG4_Ill_MetaSV_5429:HG4_Ill_GATKHCSBGrefine_6797:HG4_Ill_Cortex_3720:HG4_Ill_250bpfermikitraw_13180:HG4_Ill_150bpfermikitraw_12635:HG3_PB_SVrefine2PBcRDovetail_4466:HG3_PB_SVrefine2Falcon1Dovetail_5962:HG3_Ill_svaba_12424:HG3_Ill_manta_2294:HG3_Ill_Spiral_10353:HG3_Ill_SVrefine2DISCOVARDovetail_7305:HG3_Ill_MetaSV_5374:HG3_Ill_GATKHCSBGrefine_6560:HG3_Ill_Cortex_3752:HG2_PB_SVrefine2PBcRplusDovetail_11229:HG2_PB_SVrefine2PB10Xhap12_7097:HG2_PB_SVrefine2Falcon2Bionano_4572:HG2_PB_SVrefine2Falcon1plusDovetail_12024:HG2_Ill_svaba_12309:HG2_Ill_manta_2808:HG2_Ill_SpiralSDKrefine_17319:HG2_Ill_SVrefine2DISCOVARplusDovetail_13193:HG2_Ill_MetaSV_5205:HG2_Ill_GATKHCSBGrefine_6675:HG2_Ill_Cortex_9080:HG2_Ill_250bpfermikitraw_13275:HG2_Ill_150bpfermikitraw_12461;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0686695;ClusterMaxSizeDiff=0.0347826;ClusterMaxEditDist=0.214592;PBcalls=15;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=113;DistBack=8503;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=8:127086929-127086929;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:57:1/1:1:24:1:12:./.:0:0:0:0:1/1:0:35:./.:.:.:.:.:.
chr8	127865466	HG4_Ill_GATKHCSBGrefine_6804	T	TAAAAAACAATGTATTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAACAAAAACAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_17598:HG4_PB_SVrefine2Falcon1Dovetail_5992:HG3_PB_assemblyticsfalcon_26925:HG3_PB_SVrefine2Falcon1Dovetail_5966:HG2_PB_pbsv_9767:HG2_Ill_breakscan11_4005:HG2_PB_PB10Xdip_29374:HG2_PB_SVrefine2Falcon1plusDovetail_12027:HG3_PB_pbsv_9508:HG4_Ill_MetaSV_5432:HG4_Ill_GATKHCSBGrefine_6804:HG3_Ill_GATKHCSBGrefine_6565:HG2_Ill_GATKHCSBGrefine_6682:HG2_PB_SVrefine2PB10Xhap12_7101:HG3_PB_HySA_14640;NumClusterSVs=15;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_6804:HG4_Ill_MetaSV_5432;NumExactMatchSVs=2;ClusterMaxShiftDist=0.253623;ClusterMaxSizeDiff=0.253623;ClusterMaxEditDist=0.300195;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=292;DistBack=161523;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:127865467-127865479;PctSeqSimilarity=0.9983;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:33:0|1:26:3:1:27:./.:0:0:0:0:0/1:29:20:./.:.:.:.:.:.
chr8	128038124	HG3_PB_assemblyticsfalcon_26926	A	AGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTTAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5967:HG3_PB_assemblyticsfalcon_26926:HG2_PB_pbsv_9768:HG4_PB_HySA_14197:HG4_PB_pbsv_9793:HG2_Ill_breakscan11_4006:HG2_PB_HySA_17601:HG4_PB_SVrefine2Falcon1Dovetail_5993:HG4_PB_SVrefine2PBcRDovetail_4887;NumClusterSVs=9;ExactMatchIDs=HG3_PB_assemblyticsfalcon_26926;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0677467;ClusterMaxSizeDiff=0.0677467;ClusterMaxEditDist=0.184971;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=-1;DistForward=42661;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:128038125-128038124;PctSeqSimilarity=0.9884;PctSizeSimilarity=0.9761;PctRecOverlap=0.9522;SizeDiff=-8;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=97;MatchId=5475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:39:0|1:29:2:2:29:./.:0:0:0:0:0/1:22:10:0/1:10:37:.:.:.
chr8	128356652	HG2_PB_SVrefine2Falcon1plusDovetail_12028	T	TAAAAATTGCCTGGCTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_HySA_14198:HG2_PB_SVrefine2PB10Xhap12_7106:HG2_PB_pbsv_9773:HG4_PB_pbsv_9797:HG3_PB_HySA_14645:HG2_PB_SVrefine2PB10Xhap12_7105:HG2_PB_PB10Xdip_29378:HG4_PB_SVrefine2Falcon1Dovetail_5995:HG2_PB_SVrefine2Falcon1plusDovetail_12028:HG2_PB_HySA_17604:HG3_PB_pbsv_9513;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12028;NumExactMatchSVs=1;ClusterMaxShiftDist=0.168224;ClusterMaxSizeDiff=0.155763;ClusterMaxEditDist=0.218069;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=164;DistBack=10004;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:128356653-128356667;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5476.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:48:./.:23:15:9:26:./.:0:0:0:0:0/1:32:7:./.:.:.:.:.:.
chr8	128533829	HG2_10X_SVrefine210Xhap12_6986	T	TAAATAAATGGTAAGCTATATATGTATACATGTGCCGTGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCCACCCCACAACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCATGTCCCTACAAAGGACGTGAACTCATCATTTTTATGGCTGCATAGTATTCCACGGTGTATATATTCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATATGTGTGCATGTGTCCTTATAGCAGCATGATTTATGGTCATGTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGTAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACATTCCCACCAACAGTGTAAAAGTGTTCCTGTTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTGTAATGATTGCCATTCTAACTAGTGTGAGATGGTATCTCATAGTGGTTTTGATTTGTATTTCTCTGATGGCCAGTGATGATAAAAAAAAAAGAAGTTGTTATTAGTCTATTCAAAGTATTAAAGCAAAATATGACAATGACTCAATAAATAGGAAATGTTAGTAGAGAAATAGAAAGCTATAAAACAAAGCAAATGTATATTTTAGAGTTGAAATGTCAGTAACAAAAATTAGAAATTTACTAGATGTTCTCAATAGCAAATTTGAGATGGCTGAAGAAAGAATTAGTGTATTTGAACATTGTTCAATATAAATTATCTAATCTTAAGGGAGAAAAAGGATTGAAAGAAATGAAAACAGCTTCAGAGCCATATAGGACAGTATCAAGTATGGTAACATACATGAAACAGGAGTAGTAGAAAAAGAAGTGAAAGAGTAAGGGGATGGATCAAATATTTGAAGAAAAAATGGCCAAAAACTTCACATATTTGATTATTTAAAAACTTTCTTAAAATTAATCTACACATCCAAGAACTTTAACAAAACCTGAATAGGACAAACACAAAGAGACACCCATAATCAAACTTCTGAAAGCCAAAAGACACATCATAATCAAACTTCTCGAAGCCAAAAAGAAAGACTAAATTATAAAAGTAGCAATTGAAAGGAGCAAAAACCAACCAACCAAACAAACAAAAACAAAAGCTCATCCCATTCAGCAGACTAATAATATAACTAGTGGCTCATTTTAATCAGAAATAATGGCGATCGAAAGATATATTCAAAATGCTAAAAGAAAGAGAAACAATCCACTCTGAATTCTATATCCATTGAAATTATCCTTTAAAATTAAAAATGAAAAAATCTGAAAGAATTCATTGCAAGTAGATTTGTCTTACACGAAATACTAAAGTCCTTCAGGCTGAAAAGAAATGACAACAAACAGTAACTCCAATTCATGGGATAAAATAAAGAGCACAAAAAATGGTAAATACGTGAGTAAATATGAAAAATTATATATGTAGTCTTCATATGTGAGTAAATAAAAACTATACATACAAAAAAAATAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4007:HG2_PB_pbsv_9775:HG3_PB_pbsv_9515:HG3_PB_HySA_14647:HG4_PB_HySA_14200:HG4_PB_SVrefine2PBcRDovetail_4891:HG4_Ill_GATKHCSBGrefine_6807:HG4_PB_SVrefine2Falcon1Dovetail_5997:HG2_PB_SVrefine2Falcon2Bionano_4578:HG3_PB_SVrefine2Falcon1Dovetail_5971:HG3_PB_SVrefine2PBcRDovetail_4469:HG3_Ill_GATKHCSBGrefine_6568:HG2_Ill_GATKHCSBGrefine_6686:HG2_10X_SVrefine210Xhap12_6986:HG2_PB_SVrefine2PBcRplusDovetail_11235:HG2_PB_SVrefine2PB10Xhap12_7108:HG2_PB_SVrefine2Falcon1plusDovetail_12030:HG2_PB_HySA_17607:HG2_PB_PB10Xdip_29379;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6986:HG2_Ill_GATKHCSBGrefine_6686:HG3_Ill_GATKHCSBGrefine_6568;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0556683;ClusterMaxSizeDiff=0.0539287;ClusterMaxEditDist=0.156134;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=1705;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=8:128533830-128533850;PctSeqSimilarity=0.9997;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:87:1/1:1:33:0:30:./.:0:0:0:0:1/1:0:37:1/1:17:419:.:1575:.
chr8	128625302	HG3_PB_pbsv_9516	T	TTTTGGAGCGCGAGATTGGCACACTGCACTCGCACCCAGACAACAGAGGGCAAGACTCGTCTGCAAAAATAAAATAAAATAAAGGAAAGAAAAAAGAAATTTCAGGCAGAGGAGGTCGCGGGCGGAGGCCCCAGAAGGTCGAAGGGGCCGGCGGGCTGGGGTCGATGGGCTTTAGGAGGCCCGTGCTGGCCATGGTGGACCGCGGCTGGTGGTTGGCGCGGCTGGCTGCGGCCCGGGGCAGTGGCGGAGCCAGGACAGTCGCGGCGCTGAGCCCGGGCCCAGCTGGGAGATATGAAGCGGAGTCGGCTGCGCGCGACGACCGCCAGCCGCCGCGGCGAGCAGGAGGAATGGAGTTCAGCGGGCGCAGGCGGAGCTGTTGCAGTCTTTTGCCGCCTGCGCCGGGAGAGCGGCCGCCGGGGGCGCGCTGCCAGCGCGATCCCATGAGATTCAGCGCTGAGAGCGGACAGGCCCCGCGGCGGCCGAGGCCAAGGAGTCACCCGCTGCCTTGGCCTCCCTAAAGTGCGAGATTGCAGCCTCATGCCCGCTGCGCACCCGTCTGGAAGTGAGGAGTGGTCTCTGCCTGGCCCGCCCCAAATCGTCTGGGATGTGAGGAGCCCCCCTCTGCTGGCTGCCCAGTCTGGAAAGTGAAGGAGCGTCTGCCGCCGGCCGGCGCCATCCATCTAGGAAGTGAGGAGGGGGCGCTTTGCTTCCAGCGCCATCCACATCTAAAGGAAGTGAGGAGCGTCTCTTCTGCCCGGCCGCCATCGTCTGAGATGTGGGAGCGGGCCGTCTGCCGCGCCCATCTGGATGTGAGGAGCGGCTCTGCCCGGCCGAGACCCAGTCTGGAGGTGGAGGGTTCTGCCGCGGCCGTCTGAGAAAGTGAGGAGACCCTGCCTGCCCACCGTTGAGAAGTAAGGAGCCCTCGCGCCCGGCAGCTGCCCGTCTGAGAAGTGAGGGAGTCCTCTCCGCGTCCGCAGCCACCGCCATCTGGGAAGTGTAGGAGCGGTCTCGCCGGCACCACCCGTGCCGGGAGGGAGTGGGGGGGTCAGCCCGCCGGCCAGCGCCCGCAGTCCGGAGGGGGTGGGGGTCAGCCCGCCGCCGGTCCAGCCGTGCCCATTCGGGAGGGAGGTGGGGGGTCAGCCCCGCCGGCAGCCCGTGGGGCATCGGGAGGAGGTGGGGGGGTCAGCCCCCGCCGGCCAATAGGGGTGCGTCCGCCCGTCTGGAGGTGAGGGGCGGGCTCTGCCGGCCGCCTACTGGGAAGTGAGGAGGGCCCTCAGCCCGGCCAGCGCACCCGTCAGGGAGGGAGATGGGGGGGTCAGGCCCCGCCCACCGGCGGCCAGCCCGCCGGTCCGGTAAAGGGAGGATATGGGGTCGCGCCCCGCCGCCTGGGCAGCCGGCCCGTCGGAGGGAAGGTGGGGGGGAGGAGTCATCCTCCGCCTCGGCAGCGCGCCGTCTGGGAGTGAGGGGCGGCCTCTGCCAGCCGCGCCCTACTGGGATAGTGAGGAGGCCCTCTGCGCCGGCCAGCGCGCTCCCGTCCGGGAGGAGTGGGTGGGTACCCCTCGCCCGGCCAGCGCTCCTGTCGGGGAAGGGAGGGTGGGGGGTCAGCCCTCCCGCCCGCAGCCGCCCGTCTGGGAGGTGAGGGCGCTTCTGGCGCGCCGGCCGCCCTACTGGGAAGTGAGGAGCCCCTCAGCCGGGCCAGCAAGCCGCCCCGTCCGTTAGGGGTAGGGGGGTCAGCCGCCCGCGGCAAGGCCCCGGTCCGGGAGGGAGGTGGGGGAGGTCAGCCCCGCCCGGCCAGCCGTCCGTCTGGGAGGGAGGTTGGGGGGGGTCAGCCCCCGCCCAGCCAGCGCCTGTCCGGGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCGCCCTCACTGAAGTGAGGGCCTCTGCCCGGCGGCAGCCGCCTGTCGGGAGGGGGTGGGGGTCGGCCCCGCCGGCCAGCCGCCCGTCGGGAGGGAAGGTGGGGGAAGGGGAGGGACGTGGGGGTCGGCCCCCCCCCGGTCAGCGCCTGTCGGGAGGGAGGTGGGGGGGGGTCGGCCCGCCATGCAGGGCGGACCAGCGACGCCCGTCCGGGAGGTGAAGGGGCGGCCTCTGCTCGGCGCCGCTCCTACTGGGCAGTGAGGAAGCCCTCTCTGCCCACCGCCAGACGCCCCGTCGGGAGGGAGGTGGGGGTCAGCCGCCCGGCCAGGCCGCCGTCCGGGAGGAGGTGGGGGGGTCAGCCCGCGCGCCGGCAGCCAGCCCGCCATGTCCGGGAGGTGAGGGGCGCCTTCTGGCCTGGCCTCGCCCGGCCCGCCCTATGGGAAGTGAGGAGCCCCTACTGACGGCTAAAGCAGCCGCCGTCCGGGAGGGAGGTGGGGGAGGAGGGGTCGCCGCCGCTCCCGGCCAGCGCCGTCGGCGAGGGAGGATGGGGGGTCGGACCCCGACCGTCCGGCCACCGCCCCGGTCGGAGTGAGGGGCGCCTCTGGCAGGCCTACTGGAAGTGGGGCCCTCTGCCGGGCCAGCGCCGTCGGAGGGAGGTGGGGGTCACCCGCCCCGGGCCAGGATGGGTCCGCCGTCGCGTGGAGGGAGGTTGGGGGGTCAGCCCACGCGCCGCCAGCCGCCCGTCAGAGGGAGGTGGGGGGGGTTCAGCCCCTCTGCCCGGCGCAGCGCCCCGTCGCGGGAGGTGAGGGGCTGCTGGCCACGGCGCCCTACTGGGAAGTGAGGAGGCCCTTGCCGGCCACGCACTCCGTCTGGGGGTGTGGGCAACAGCTCATTGAGAAGGGCCGGATGACAATGGCGGCTTTGTGGAATAAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAATGGCATGGGTTGCCGTGTCTGTGTAGAAGAAGTAAGACATGGGAGATTTTCATTTGTTCTGGCAACTAAGAAAATTCCTCTGCCTTGGAATCCTGTTGATTCTGTGACCTTACCCCCCGAGAACCTGTGGTCTCTGAAACATGTGCGTGTCCACTCAGGGTTAAATGATTAAAGGGGGCGGTGCAAGATGTGCTTTGTTACAACGATCCTTGAAGGCAGCATGTCGTTAAAGAGTCATCACCATCCTAATCTCAAGTAATCAGGGACACAAAACACTGCGGAAGACGCAAGGGTCCTCTGGCCTAGGAAAACCAGAGACCTTGTTTCAAGTTGTTTTATCTGCTGACCTTCCTCACTATTGTCCATGACCCTGCCAAACCAGCCTCTGTGAGAAAACCAAGAGATATAATAAAAATAATTAAAAAAAAAAAAAAAAAAAAAAGATAGCTGTTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29380:HG3_PB_pbsv_9516:HG2_PB_SVrefine2Falcon1plusDovetail_12031:HG2_PB_pbsv_9776:HG3_PB_assemblyticsfalcon_26930:HG2_PB_SVrefine2PB10Xhap12_7109:HG2_PB_SVrefine2PBcRplusDovetail_11236:HG3_PB_SVrefine2Falcon1Dovetail_5972:HG2_Ill_breakscan11_4008;NumClusterSVs=9;ExactMatchIDs=HG3_PB_pbsv_9516;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0438356;ClusterMaxSizeDiff=0.0432268;ClusterMaxEditDist=0.225462;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=3296;DistBack=-2;DistForward=6413;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:128625290-128625305;PctSeqSimilarity=0.9149;PctSizeSimilarity=0.9912;PctRecOverlap=0.9909;SizeDiff=29;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=96;MatchId=5478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:18:63:./.:11:18:5:26:./.:0:0:0:0:0/1:37:17:0/1:126:46:.:3482:.
chr8	128631716	HG2_Ill_GATKHCSBGrefine_6687	A	ATCTCACCACCACCCCTGGGAACACAGGTCTACCTTCCCCACCAGGAACCATGGGCCAGT	20	PASS	ClusterIDs=HG3_PB_HySA_14648:HG2_PB_PB10Xdip_29381:HG2_PB_pbsv_9777:HG3_PB_pbsv_9517:HG3_Ill_Krunchall_13280:HG2_PB_HySA_17608:HG3_Ill_GATKHC_15825:HG3_Ill_GATKHCSBGrefine_6569:HG3_Ill_250bpfermikitraw_12892:HG3_Ill_150bpfermikitraw_12507:HG2_Ill_GATKHC_15883:HG2_Ill_GATKHCSBGrefine_6687:HG2_Ill_250bpfermikitraw_13290:HG3_PB_assemblyticsfalcon_26931;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13290:HG2_Ill_GATKHCSBGrefine_6687:HG2_Ill_GATKHC_15883:HG3_Ill_150bpfermikitraw_12507:HG3_Ill_250bpfermikitraw_12892:HG3_Ill_GATKHCSBGrefine_6569:HG3_Ill_GATKHC_15825:HG3_Ill_Krunchall_13280;NumExactMatchSVs=8;ClusterMaxShiftDist=0.165289;ClusterMaxSizeDiff=0.14876;ClusterMaxEditDist=0.229508;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=6413;DistForward=56;DistMin=56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=182;REFWIDENED=8:128631593-128631774;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:0|1:23:3:1:25:./.:0:0:0:0:0/1:16:7:./.:.:.:.:.:.
chr8	128881028	HG4_Ill_GATKHC_15909	T	TATATATATACACGTATATATATATGTATATACATATATATATACGTATATATATATGTATATAC	20	PASS	ClusterIDs=HG2_PB_pbsv_9778:HG4_PB_SVrefine2Falcon1Dovetail_5998:HG3_PB_HySA_14650:HG2_PB_HySA_17611:HG4_PB_pbsv_9800:HG2_Ill_breakscan11_4009:HG3_Ill_scalpel_9480:HG4_Ill_GATKHC_15910:HG4_Ill_GATKHCSBGrefine_6810:HG4_Ill_Krunchall_13875:HG3_Ill_GATKHC_15828:HG3_Ill_GATKHCSBGrefine_6572:HG3_Ill_FB_8572:HG3_Ill_150bpfermikitraw_12509:HG4_Ill_Krunchall_13873:HG4_Ill_GATKHC_15909:HG4_Ill_GATKHCSBGrefine_6808:HG4_Ill_250bpfermikitraw_13195:HG4_Ill_150bpfermikitraw_12648:HG3_Ill_manta_2297:HG3_Ill_Spiral_10361:HG3_Ill_Krunchall_13281:HG3_Ill_250bpfermikitraw_12894:HG2_Ill_manta_2812:HG2_Ill_SpiralSDKrefine_17330:HG2_Ill_Krunchall_13611:HG2_Ill_GATKHC_15884:HG2_Ill_GATKHCSBGrefine_6688:HG2_Ill_250bpfermikitraw_13291:HG2_Ill_150bpfermikitraw_12475:HG2_PB_PB10Xdip_29382:HG3_PB_pbsv_9520:HG4_PB_SVrefine2PBcRDovetail_4892:HG4_Ill_SVrefine2DISCOVARDovetail_7075:HG3_Ill_SVrefine2DISCOVARDovetail_7316:HG2_PB_SVrefine2PBcRplusDovetail_11237:HG2_PB_SVrefine2PB10Xhap12_7110:HG2_Ill_SVrefine2DISCOVARplusDovetail_13207:HG2_10X_SVrefine210Xhap12_6988:HG2_PB_SVrefine2Falcon1plusDovetail_12032:HG3_PB_SVrefine2Falcon1Dovetail_5973;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12475:HG2_Ill_250bpfermikitraw_13291:HG2_Ill_GATKHCSBGrefine_6688:HG2_Ill_GATKHC_15884:HG2_Ill_Krunchall_13611:HG2_Ill_SpiralSDKrefine_17330:HG2_Ill_manta_2812:HG3_Ill_250bpfermikitraw_12894:HG3_Ill_Krunchall_13281:HG3_Ill_Spiral_10361:HG3_Ill_manta_2297:HG4_Ill_150bpfermikitraw_12648:HG4_Ill_250bpfermikitraw_13195:HG4_Ill_GATKHCSBGrefine_6808:HG4_Ill_GATKHC_15909:HG4_Ill_Krunchall_13873;NumExactMatchSVs=16;ClusterMaxShiftDist=0.31405;ClusterMaxSizeDiff=0.31405;ClusterMaxEditDist=0.369748;PBcalls=12;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=64;DistBack=-38;DistForward=1;DistMin=-38;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=8:128881017-128881070;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5480.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:40:1/1:1:21:1:11:./.:0:0:0:0:./.:3:28:./.:.:.:.:.:.
chr8	129739067	HG2_10X_SVrefine210Xhap12_6994	ATAAA	GAAAGTTGTGCACAATATAAAAATTATAATTTTATATTTCAAAACAAATTAAATATCTTAAAATTATAGAAGACATTAAAGAACTATATAAATCAAAGTTAGAAAAAAACCCAGATGTGAGTTGGGAAATCTGAAGAAAATTTAAAAGAGAAATTTAAAAATATTAATATAAAAAATGAAGACTAAACTGGAAAGATACACTAGAGTGAATAAACAAAATAGAAAATACTCAGATGTTTTGTTTTAACTTCCTATTGTATGAGTTTTGGAGACCAACATAAGATAATGACTTGCCTCTGGATATGAAAGTAAAAAAACAGACACAGGCCTATGTAGTGATTTCTTACAGAACAACACAGCAGAAAGCAAATCCCTAACAAACCATGTGGACGTGGCTTTTACAGATGGTTGTCCAATCCCTGCATGCTATTGCTTGCTTATGGATGAGTGAAAGGAATAAAAATTTTAAGTTATAGCTACAGTTTCTCTACCTGTACATTCCAATACTGACCTTGCATGGTTTCTTTGAGGGCTAAGTATGACAAAAGGATGCAGTGATTTCGAACTTAGATTTTAAAAAACAAATATGACTCTTTTGAACTGTGTGAACATAGGCACATTGCTGGATCTGAGTAATTTCATGTGCTAAGAGGGAATAATAGCATCAGCCTTAATGCTGCATTATTGCATTTAGCATTATTTCTTTCTGAAGATGAAAGAAGACAGACATCATTATATTTAACAAAGTGCCTGGCACATATAAAATAGTCAATAAATGTTATCTATCATTGCTATTATTACCTAATACTGCGCATAGTAAGCCCTGAACCTGTTCCTGGCATGTGGAGCCATGTACTATGTTCATGACATTAAACAAAGTAGTAGCTATATAATGAATATATAAATGTGACTTTTATTATTACATCCCTGTAGTTTTGGCAAGTAGTTTACTAAAAGGAAGTTCCAATTTTGACTTAGCATGGAGTTTGTTTTTATCCTGGGCATGTTATCTACCCAGCTTACCTTATTCTTCCTTTCTTCGAAACAGGAATCATGCTTGTTAATTGACTGGGATGTTGCAAGGCCTTATATCTGAGAAGTATATCATCAAGGAATAGAGAAGATGAGTCTTAGAGAGGAAATGGAAGCCCCTGTCAATTAGGAGAGGCAAAGGCTCTATGATACAGCATAGCCTAAGAATTTCGTTGATACAGAATTCTAAGTGTGAAACGAATGAATGGAGTGACCACTCCTCCCTACTAAAGAATCTTGTAAACACTAGTTTTAAAAGCACAAACGTATTATATCATATACCTATGTATAATGTCATTTTGCTACTTTTCTCTTCCAACTTCTCAAATCTTTGAATGCAGGGGTTTTTGGAGTTATTCCCTGTGTATTATTTCGACTGATATGTAATAGCTGCTCAGCGAATGTGTGTTGCTAAATAAGAGATGGAGTACAGACAAGCTGAAATTGCACATTTATGTTGCCATTGTACTGCTCAAAAAAAAAAAAAAATTAGAATTAGGGTTAAAGAGAGTGCTCAGGCCCTAGACTAGGATTTATTTGCTGTATAATAAACTTTATGCAAACAATTAACCTCCCTGCTTCTCAATTTTCTCCTCTATAAAATTGGGTTATTACAAAATTCTTTGTAACATATTATGGAGTTCAATTAGGATAAGTTAAATATTGGAAATCTGAAGCATTATGCAAATATGAGGCATTATTATAATAATTATAACAATATTGTTTTTATTCTTAATTGCTACTCTTGAGTACTCTGTTGCTCTGCAGATATCTCTCTCCCTGCCTTCCCCAGGGTGTTGGCATACCAGGATGCCTCTTTAGAAAAGAAATTGTACGATCGACCTAAGGAAACAGAATTTTCCATCCTGGCATTTGCATAAAGGCCACACATGCATAGCCATATGCTGATTTAACCAACAGCTTTCACACTTATAATCGAGTTTGCTACTTGTTCTGCGATATCTACTCTCCCTCTATTTCTTATTAATAGAACAAAATTTTAGTTGGGAATATGGCTACTGAGAATAAAGATTACCTTTCTCAGCTTCTTTGCGGCTAACTCTGATTATGTGTCTAAACTTTGGTGCATATTTTGGTAAACGGAAATTCTTAAAGGGAGATTCTCTACTTTCTTCCTGCTTGCTGGAATGCAAACATGATTGTTGGATTTGAGCAGCCATCTTATGCCAGGAGTTGGAAACCATGCAGGCAGATCCTGGTCATTAGCACTACAGACCTCTATACCAAACTGGATTTCTGTGAGACTCCAGAAGAAAGTAAGCAGCACAAGGAGTTTCTTCATGTATTCTTCATTTCCCACACCCCATTATACGTGCTTTTGCTGTAATCTGGAATCAGTTGTACTAATCTACTGCACATACCTAGATTCTATTGATAGTCTATTCCAGGATTGATAACTTTGAGCCCAGATAACTTGCAGTAAGATTTATAACAAGATTTCAAAAATATTCTTTCCTATACACCAAATAGTTTTGGTTAGAGAAAACAAAACTTTTGGCATAGCAACTTCATTTGTAGGAAGTTACCTTCTTAAAATTGTTTATCTGTGGACAGCTATGCTGCTATTAGTAGGGAATGGTTTCAGGCAAGAGGTTACAGAAGGATGGAGAGGGCCTGGGCTTTGGGGTTCCAGGGGTATGGAAGTCAGCAGAGCTGAGAGTAGTTCCCAACAGCCAGAGTGTCCATGGATCAAGCCCTTTTGTGAAGCTGGAGGTACCAGCGCTGGTCCAGGATGCGCAGCTGTAAAGTTGTGAATATATGTATTTGGTCTTTTTCCTTGTTTGCTGGCCTACAACTCTTAAAATCCTTGGAATCTTCAAAGTGATGTGTCTTTTTGTATGCTAATGAGTTGACTAATGGCTGGCAGCCTCTAGGTGGCTTCTGGATAAGAGCTGGTCACCAGGAAGACCAAGGCCAGATTAGAGGGTTGGGACATTCGGTCCTACTCCGCAACCACCATGGAGACAGTCTGAAGGTTAACTTGATCACCAATGGCCAATAATTTCATCAATCATGCCAGTGTAATGAAGCCAGCATAAAAACTCAAAAGGACAGGGCTCAGAGAGTTCCATTAGCTGAACATTGGAGGTTCCCACAAGTGGCATGCCCGGAGGGGGTTATGGAAGCTTCACACCCTTTCCCCATACCTCACCCTGTGCATCTCTTCATCTGTATCTTCTGTAATATCCTTTATAATACGCCATTAAATATAAGGAAGTATTTCTCTGAGTTCTGTGAGCCACTCTACCACATTAATCGAACCCCATGGGGAAGCTGAGTAAAGTTTCAAGTGGAGTAAAATTGCTGATACCGTGACCATCAGGTCAATGTTGCTGGAAGCACAGGTAAAACAACCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4896:HG3_PB_pbsv_9528:HG2_Ill_SVrefine2DISCOVARplusDovetail_13212:HG2_PB_pbsv_9784:HG2_PB_SVrefine2PB10Xhap12_7113:HG2_PB_PB10Xdip_29384:HG4_PB_SVrefine2Falcon1Dovetail_6002:HG3_PB_SVrefine2PBcRDovetail_4472:HG3_Ill_SVrefine2DISCOVARDovetail_7323:HG2_10X_SVrefine210Xhap12_6994:HG2_PB_SVrefine2PBcRplusDovetail_11240:HG3_PB_SVrefine2Falcon1Dovetail_5978:HG2_PB_SVrefine2Falcon1plusDovetail_12034;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6994:HG3_Ill_SVrefine2DISCOVARDovetail_7323:HG3_PB_SVrefine2PBcRDovetail_4472;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0582026;ClusterMaxSizeDiff=0.0582026;ClusterMaxEditDist=0.214176;PBcalls=10;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=3405;DistBack=17317;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:129739072-129739066;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9997;PctRecOverlap=0.9991;SizeDiff=-1;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:110:1/1:1:44:0:33:./.:0:0:0:0:1/1:0:47:1/1:4:374:.:3274:.
chr8	129882831	HG3_Ill_GATKHCSBGrefine_6578	A	ATATTTTAGAAATGGATTTTAAGGGCAATATTTAGAAATCAAAAATAAAACTAAATTTTAAAAAAACTAATTTTAAAATTTTTAAAATTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6996:HG2_PB_pbsv_9787:HG3_PB_pbsv_9530:HG3_Ill_svaba_12439:HG3_Ill_Krunchall_13297:HG3_Ill_GATKHC_15842:HG3_Ill_GATKHCSBGrefine_6578:HG3_Ill_250bpfermikitraw_12909:HG3_Ill_150bpfermikitraw_12524:HG2_PB_SVrefine2Falcon2Bionano_4579:HG2_Ill_svaba_12327:HG2_Ill_SVrefine2DISCOVARplusDovetail_13213:HG2_Ill_Krunchall_13628:HG2_Ill_GATKHC_15899:HG2_Ill_GATKHCSBGrefine_6692:HG2_Ill_250bpfermikitraw_13304;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6996:HG3_Ill_svaba_12439:HG3_Ill_Krunchall_13297:HG3_Ill_GATKHC_15842:HG3_Ill_GATKHCSBGrefine_6578:HG3_Ill_250bpfermikitraw_12909:HG3_Ill_150bpfermikitraw_12524:HG2_PB_SVrefine2Falcon2Bionano_4579:HG2_Ill_svaba_12327:HG2_Ill_SVrefine2DISCOVARplusDovetail_13213:HG2_Ill_Krunchall_13628:HG2_Ill_GATKHC_15899:HG2_Ill_GATKHCSBGrefine_6692:HG2_Ill_250bpfermikitraw_13304;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0441989;ClusterMaxSizeDiff=0.0110497;ClusterMaxEditDist=0.142857;PBcalls=3;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=89;DistBack=36822;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=8:129882832-129882900;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5482.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:40:0|1:30:0:3:38:./.:0:0:0:0:0/1:14:26:./.:.:.:.:.:.
chr8	130907669	HG2_Ill_breakscan11_4010	T	TCATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4010:HG2_PB_pbsv_9788:HG3_PB_assemblyticsfalcon_26951:HG4_PB_pbsv_9809:HG2_PB_SVrefine2Falcon2Bionano_4580:HG4_Ill_GATKHCSBGrefine_6818:HG4_Ill_MetaSV_5437:HG2_PB_SVrefine2Falcon1plusDovetail_12037:HG3_PB_SVrefine2Falcon1Dovetail_5981;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_breakscan11_4010;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0764526;ClusterMaxSizeDiff=0.0764526;ClusterMaxEditDist=0.213213;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=85113;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=8:130907670-130907680;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9877;PctRecOverlap=0.9877;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:28:1|0:4:19:39:2:./.:0:0:0:0:0/1:26:8:0/1:10:26:.:.:.
chr8	131041218	HG2_PB_SVrefine2Falcon2Bionano_4582	T	TAAGATTAGCACTTCCTATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCATTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4011:HG4_PB_pbsv_9812:HG2_PB_pbsv_9791:HG2_PB_assemblyticsPBcR_26310:HG3_PB_assemblyticsfalcon_26955:HG2_PB_SVrefine2PBcRplusDovetail_11244:HG2_PB_SVrefine2PB10Xhap12_7118:HG2_PB_SVrefine2Falcon2Bionano_4582:HG2_10X_SVrefine210Xhap12_7000:HG2_PB_SVrefine2Falcon1plusDovetail_12039:HG4_PB_HySA_14213:HG2_PB_HySA_17633:HG2_PB_PB10Xdip_29391;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4582:HG2_PB_SVrefine2PB10Xhap12_7118:HG2_PB_SVrefine2PBcRplusDovetail_11244;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0694087;ClusterMaxSizeDiff=0.0694087;ClusterMaxEditDist=0.178458;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=1527;DistBack=22305;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=8:131041219-131041235;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:38:./.:0:0:0:0:./.:0:0:0:0:1/1:0:11:1/1:18:402:.:1413:.
chr8	131440652	HG2_PB_SVrefine2Falcon1plusDovetail_12041	T	TCACCACCACCATCACCATCATCATCATCACCACCATCATCATCACCACTATCATCATTACCATCACCACCATCATCATCATGACCATCATCACCACCACCATCACCACCACCACTGTCATCACCATCATCACCATCACCACCACCACCACCATCATCATCACCACCACTGTCATCACCATCACCACCATCACCACCACCACCATCATCATCACTATCATCACCACCATCATCACCACCATCATCATCACCATCACCATAACCACCACCACCACCATCCTCATCATCACCATCAGTATCACCACCATCATTATCACCATCATCACCACCACCATCATCACCACCAACACCATCATCATCATCACCATCATCATCACCACCACTATCATCACCATCATCACCACCATCATCACCATCATCATCACCACCACCATCATCACCATCGTCATCACCACCACCATCATCATCACCATAATCACCACCATCATCACCACCATCATCACACCACCAGTCATCACCATCACCACCATCACCATCACCACCACCACCACCATCATCACCACCATCACCACCATCACCACCATCATCACCATAACCAACACCACCATCACCACCACCACCATCATCCTCACACCACCACTGTCATCATCACCACTGTCATCACCATCACCACTACCACCACCACCATCATCACCACCATCACCACCATCATCACCATAACCAACATCACCATCACCAC	20	PASS	ClusterIDs=HG2_PB_HySA_17643:HG2_PB_pbsv_9793:HG2_Ill_MetaSV_5214:HG3_PB_pbsv_9534:HG4_Ill_MetaSV_5440:HG4_PB_pbsv_9814:HG3_Ill_MetaSV_5382:HG2_Ill_GATKHCSBGrefine_6697:HG2_Ill_breakscan11_4012:HG2_PB_PB10Xdip_29392:HG3_PB_SVrefine2PBcRDovetail_4475:HG3_PB_SVrefine2Falcon1Dovetail_5983:HG2_PB_SVrefine2PBcRplusDovetail_11246:HG2_PB_SVrefine2PB10Xhap12_7120:HG2_PB_SVrefine2Falcon2Bionano_4584:HG2_PB_SVrefine2Falcon1plusDovetail_12041:HG4_Ill_SVrefine2DISCOVARDovetail_7086:HG4_PB_SVrefine2Falcon1Dovetail_6007;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12041:HG2_PB_SVrefine2Falcon2Bionano_4584:HG2_PB_SVrefine2PB10Xhap12_7120:HG2_PB_SVrefine2PBcRplusDovetail_11246;NumExactMatchSVs=4;ClusterMaxShiftDist=0.115461;ClusterMaxSizeDiff=0.112807;ClusterMaxEditDist=0.24773;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=737;DistBack=11220;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=414;REFWIDENED=8:131440653-131441066;PctSeqSimilarity=0.9947;PctSizeSimilarity=0.9919;PctRecOverlap=0.9756;SizeDiff=6;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=98;MatchId=5485.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:1/1:0:25:0:16:./.:0:0:0:0:1/1:0:12:1/1:1:214:.:.:.
chr8	131909929	HG4_Ill_SVrefine2DISCOVARDovetail_7089	A	ACACACATACACACCTCACACATACATACACATATACATACACACCACACACATACACACACACACCACACACATATACATACGTACCCCACACATACATACACATATACATACACACCACACACACACATATATACACACTACACACACACCCCACACACACATACACATATACATACACACCACACACACATATATACACACTACACACACACCACACATACATACACATATACACACATCACACACACATATATATATACACCACACACACACACCACACCACACATACATACACATATACATACACACCACACACACATACACATACACACCACACACATACATACACACCACACACACATACACATACACACCACACACATACATACACACCACACACACATACACATATACATACACACCACACACATATACACACAACAAACACACCACACATACACATATACATACACACCACACACACATATATACACACTACACACACACACCACACCACACATACATATACATATACACACATATACATACACACCATACACACACATATATACACACTACACACACACACCACACACACATACACATATACATACACATCACACATATATACACACTACACACACACACCACACCACACATACATACACATATACATACACACCACACACATATATATAAACACTACACACAGACACACCACACCACACATACATACACATATATATACACAGCACACACACATATATACACACTACACACAGACACACCACACCACACATACATACACATATACATACCACACACATATACACACTACACACATACACCACATCACACATACCTACACGTATACACACATCACACACATACACACCATGCACACATATCATACATATATACACATACCACACATACATACACCACACACACACCACATTCCTACCACACATAGACATATACTTGTACACAACACACACAGCCACACATGGAAAGCAAATATGCTTCATTGCCTGGAATACAGATAAACATCCACGAGGTCACCAACACTGACAGGAGTAGAGAGCTTTACACATGTTTATACACACCCCACACCTATACACATCACACACACATATACACACCACT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5985:HG2_PB_pbsv_9796:HG4_PB_HySA_14224:HG3_PB_pbsv_9537:HG2_PB_pbsv_9795:HG3_Ill_GATKHCSBGrefine_6586:HG4_PB_pbsv_9816:HG2_Ill_GATKHCSBGrefine_6699:HG4_Ill_GATKHCSBGrefine_6824:HG4_PB_HySA_14223:HG2_PB_PB10Xdip_29393:HG3_PB_HySA_14675:HG2_Ill_breakscan11_4013:HG2_Ill_SVrefine2DISCOVARplusDovetail_13224:HG3_Ill_SVrefine2DISCOVARDovetail_7333:HG2_PB_SVrefine2PBcRplusDovetail_11248:HG2_PB_SVrefine2PB10Xhap12_7122:HG2_PB_SVrefine2Falcon1plusDovetail_12043:HG3_PB_SVrefine2PBcRDovetail_4477:HG4_PB_SVrefine2Falcon1Dovetail_6009:HG4_PB_SVrefine2PBcRDovetail_4900:HG4_Ill_SVrefine2DISCOVARDovetail_7089:HG2_PB_SVrefine2Falcon2Bionano_4585;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4585:HG4_Ill_SVrefine2DISCOVARDovetail_7089:HG4_PB_SVrefine2PBcRDovetail_4900;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0569486;ClusterMaxSizeDiff=0.0569486;ClusterMaxEditDist=0.241684;PBcalls=16;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=1148;DistBack=21189;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=316;REFWIDENED=8:131909930-131910245;PctSeqSimilarity=0.9883;PctSizeSimilarity=0.9983;PctRecOverlap=0.993;SizeDiff=-2;StartDistance=-7;EndDistance=-7;GTMatch=1;TruScore=99;MatchId=5486.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:1:33:1:23:./.:0:0:0:0:1/1:0:25:1/1:4:362:.:1227:.
chr8	132942711	HG2_Ill_MetaSV_5218	A	ATCAGCACAATCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCACTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7126:HG4_PB_pbsv_9822:HG3_PB_assemblyticsfalcon_26972:HG2_PB_HySA_17662:HG4_PB_SVrefine2Falcon1Dovetail_6014:HG2_PB_pbsv_9803:HG3_PB_SVrefine2Falcon1Dovetail_5989:HG4_PB_SVrefine2PBcRDovetail_4902:HG2_PB_SVrefine2Falcon1plusDovetail_12045:HG4_Ill_GATKHCSBGrefine_6829:HG4_Ill_manta_2409:HG4_Ill_MetaSV_5444:HG2_Ill_MetaSV_5218:HG2_10X_SVrefine210Xhap12_7008:HG4_PB_HySA_14237;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_MetaSV_5218:HG4_Ill_MetaSV_5444:HG4_Ill_manta_2409;NumExactMatchSVs=3;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.25;PBcalls=10;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=326;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=8:132942712-132942724;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5487.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:20:25:0|1:18:0:4:23:./.:0:0:0:0:0/1:25:10:0/1:5:35:.:.:.
chr8	133315812	HG2_Ill_250bpfermikitraw_13341	G	GATATATATATATATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG4_PB_HySA_14240:HG3_Ill_scalpel_9512:HG2_PB_HySA_17667:HG4_PB_pbsv_9823:HG2_Ill_scalpel_9407:HG2_PB_pbsv_9804:HG2_Ill_GATKHC_15938:HG2_Ill_GATKHCSBGrefine_6704:HG2_Ill_FB_8648:HG2_Ill_250bpfermikitraw_13341:HG2_Ill_150bpfermikitraw_12519:HG3_Ill_Krunchall_13332:HG3_Ill_GATKHC_15881:HG3_Ill_GATKHCSBGrefine_6597:HG3_Ill_FB_8603;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12519:HG2_Ill_250bpfermikitraw_13341:HG2_Ill_FB_8648:HG2_Ill_GATKHCSBGrefine_6704:HG2_Ill_GATKHC_15938:HG2_Ill_scalpel_9407:HG3_Ill_scalpel_9512;NumExactMatchSVs=7;ClusterMaxShiftDist=0.291667;ClusterMaxSizeDiff=0.291667;ClusterMaxEditDist=0.3125;PBcalls=4;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=5848;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=8:133315813-133315925;PctSeqSimilarity=0.98;PctSizeSimilarity=0.96;PctRecOverlap=0.9608;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=5489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:1/1:2:23:1:23:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr8	133945531	HG2_PB_SVrefine2Falcon1plusDovetail_12048	A	ATGTGTTTATTTTGGTGTATATTTGTGTGTTTGGAGCTGTGTGTGTGTGTGTGTGTGTGTATTTGGATGGGTATTTGTGTATTTGTGTGTGGGGGGTTTTTGTGTGTATATTTGGGTGTATATTTGTGTGTGTCTGTGTGTATTTAGGTGTATATTTGTGTGTGTTTTTGTGTTTGGAGGTGCATGTGCATGTGTGTGTATATATTTGTATGTATTTGGAGGGGGGCGTGTATTTGTGTATCCACATATTTGTGTGTGGGGGGGTTTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4906:HG2_PB_pbsv_9807:HG4_PB_pbsv_9827:HG3_PB_pbsv_9547:HG2_Ill_breakscan11_4014:HG2_PB_PB10Xdip_29399:HG3_Ill_MetaSV_5389:HG3_Ill_GATKHCSBGrefine_6601:HG2_Ill_MetaSV_5220:HG2_Ill_GATKHCSBGrefine_6708:HG4_Ill_MetaSV_5446:HG4_Ill_GATKHCSBGrefine_6833:HG2_PB_HySA_17673:HG2_PB_HySA_17672:HG2_PB_HySA_17671:HG3_PB_SVrefine2PBcRDovetail_4484:HG3_PB_SVrefine2Falcon1Dovetail_5993:HG3_Ill_SVrefine2DISCOVARDovetail_7341:HG2_PB_SVrefine2PBcRplusDovetail_11255:HG2_PB_SVrefine2PB10Xhap12_7130:HG2_PB_SVrefine2Falcon2Bionano_4593:HG2_PB_SVrefine2Falcon1plusDovetail_12048:HG2_Ill_SVrefine2DISCOVARplusDovetail_13231:HG2_10X_SVrefine210Xhap12_7012:HG4_PB_SVrefine2Falcon1Dovetail_6017:HG4_Ill_SVrefine2DISCOVARDovetail_7100;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7012:HG2_Ill_SVrefine2DISCOVARplusDovetail_13231:HG2_PB_SVrefine2Falcon1plusDovetail_12048:HG2_PB_SVrefine2Falcon2Bionano_4593:HG2_PB_SVrefine2PB10Xhap12_7130:HG2_PB_SVrefine2PBcRplusDovetail_11255:HG3_Ill_SVrefine2DISCOVARDovetail_7341;NumExactMatchSVs=7;ClusterMaxShiftDist=0.080292;ClusterMaxSizeDiff=0.080292;ClusterMaxEditDist=0.161871;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=267;DistBack=-13;DistForward=-1;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=8:133945532-133945560;PctSeqSimilarity=0.9964;PctSizeSimilarity=1;PctRecOverlap=0.9551;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=98;MatchId=5490.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:1/1:3:18:0:15:./.:0:0:0:0:1/1:1:18:./.:.:.:.:.:.
chr8	134655214	HG2_Ill_Krunchall_13677	T	TAGAGATAGGAGGAGGAGGAGAAAGGCGGCTGAGCACCATCAGGGCGGATGCTTGTG	20	PASS	ClusterIDs=HG2_PB_HySA_17681:HG4_PB_pbsv_9830:HG4_PB_HySA_14250:HG3_PB_pbsv_9552:HG2_PB_pbsv_9810:HG2_PB_PB10Xdip_29406:HG4_PB_SVrefine2PBcRDovetail_4909:HG4_PB_SVrefine2Falcon1Dovetail_6020:HG4_Ill_svaba_12453:HG4_Ill_SVrefine2DISCOVARDovetail_7104:HG4_Ill_Krunchall_13920:HG4_Ill_GATKHC_15972:HG4_Ill_GATKHCSBGrefine_6836:HG4_Ill_250bpfermikitraw_13242:HG4_Ill_150bpfermikitraw_12687:HG3_PB_SVrefine2Falcon1Dovetail_5997:HG3_Ill_svaba_12480:HG3_Ill_SVrefine2DISCOVARDovetail_7348:HG3_Ill_Krunchall_13342:HG3_Ill_GATKHC_15895:HG3_Ill_GATKHCSBGrefine_6606:HG3_Ill_250bpfermikitraw_12957:HG2_PB_SVrefine2PBcRplusDovetail_11258:HG2_PB_SVrefine2PB10Xhap12_7134:HG2_PB_SVrefine2Falcon2Bionano_4596:HG2_Ill_svaba_12361:HG2_Ill_manta_2818:HG2_Ill_SVrefine2DISCOVARplusDovetail_13239:HG2_Ill_Krunchall_13677:HG2_Ill_GATKHC_15949:HG2_Ill_GATKHCSBGrefine_6711:HG2_Ill_250bpfermikitraw_13350:HG2_10X_SVrefine210Xhap12_7015:HG3_PB_HySA_14704;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7015:HG2_Ill_250bpfermikitraw_13350:HG2_Ill_GATKHCSBGrefine_6711:HG2_Ill_GATKHC_15949:HG2_Ill_Krunchall_13677:HG2_Ill_SVrefine2DISCOVARplusDovetail_13239:HG2_Ill_manta_2818:HG2_Ill_svaba_12361:HG2_PB_SVrefine2Falcon2Bionano_4596:HG2_PB_SVrefine2PB10Xhap12_7134:HG2_PB_SVrefine2PBcRplusDovetail_11258:HG3_Ill_250bpfermikitraw_12957:HG3_Ill_GATKHCSBGrefine_6606:HG3_Ill_GATKHC_15895:HG3_Ill_Krunchall_13342:HG3_Ill_SVrefine2DISCOVARDovetail_7348:HG3_Ill_svaba_12480:HG3_PB_SVrefine2Falcon1Dovetail_5997:HG4_Ill_150bpfermikitraw_12687:HG4_Ill_250bpfermikitraw_13242:HG4_Ill_GATKHCSBGrefine_6836:HG4_Ill_GATKHC_15972:HG4_Ill_Krunchall_13920:HG4_Ill_SVrefine2DISCOVARDovetail_7104:HG4_Ill_svaba_12453:HG4_PB_SVrefine2Falcon1Dovetail_6020:HG4_PB_SVrefine2PBcRDovetail_4909;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0862069;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.233333;PBcalls=13;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=56;DistBack=-56;DistForward=-1;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=8:134655215-134655272;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5492.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:1:19:2:23:./.:0:0:0:0:1/1:1:41:./.:.:.:.:.:.
chr8	134727672	HG4_PB_HySA_14252	C	CTTCCCTCCCTCTCTCCCCCCTCCCTTTTCTGCTTTCCTCCTCCCTTTTCTCCT	20	PASS	ClusterIDs=HG2_PB_HySA_17682:HG4_PB_HySA_14252:HG4_Ill_GATKHC_15974:HG3_Ill_GATKHCSBGrefine_6607;NumClusterSVs=4;ExactMatchIDs=HG4_PB_HySA_14252;NumExactMatchSVs=1;ClusterMaxShiftDist=0.130841;ClusterMaxSizeDiff=0.130841;ClusterMaxEditDist=0.149533;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=14;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=8:134727671-134727674;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9811;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5493.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:30:3:2:31:./.:0:0:0:0:0/0:9:0:./.:.:.:.:.:.
chr8	134972223	HG2_PB_SVrefine2PBcRplusDovetail_11260	C	CAAGAATATGTGTCTGTCTGCACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACCCAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAAGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATTAAAAAAAAAAAAAAAAAGAATCTTATATGTGTGTACTATGAGGCATGCACAAAGATGTTCAATGCAGCATTGTTTATAATAGCAAAAAAAAAAAAACCCTGGAAACAAAGCAAATGTTCATTAATAGGAAATCAATTGTATAAACTGTAATGTATTCATTCTATAAAATACTTTTTAAAATAATAAAGCTGATCTTTATGTTCTGAAATGGAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_14255:HG2_PB_assemblyticsPBcR_26347:HG3_PB_assemblyticsfalcon_26993:HG4_PB_SVrefine2Falcon1Dovetail_6022:HG3_PB_SVrefine2Falcon1Dovetail_5999:HG2_PB_pbsv_9811:HG4_Ill_MetaSV_5449:HG4_PB_HySA_14256:HG2_PB_HySA_17687:HG2_PB_SVrefine2PBcRplusDovetail_11260:HG4_PB_SVrefine2PBcRDovetail_4910:HG2_10X_SVrefine210Xhap12_7017:HG2_PB_SVrefine2Falcon1plusDovetail_12051;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_11260;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0423928;ClusterMaxSizeDiff=0.0405087;ClusterMaxEditDist=0.164804;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=1056;DistBack=-5;DistForward=-1;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=8:134972224-134972242;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.9991;PctRecOverlap=0.9981;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5494.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:44:0|1:46:2:1:37:./.:0:0:0:0:0/1:34:12:0/1:46:164:.:.:.
chr8	135358684	HG2_Ill_250bpfermikitraw_13359	G	GATATATATCATATATATTTATATATGATATATATCATATATATTTATATATGATATATATC	20	PASS	ClusterIDs=HG2_Ill_Krunchall_13685:HG2_PB_pbsv_9815:HG3_PB_pbsv_9557:HG2_Ill_SpiralSDKrefine_17376:HG2_Ill_GATKHC_15961:HG2_Ill_GATKHCSBGrefine_6713:HG2_Ill_250bpfermikitraw_13359:HG2_Ill_150bpfermikitraw_12537;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12537:HG2_Ill_250bpfermikitraw_13359:HG2_Ill_GATKHCSBGrefine_6713:HG2_Ill_GATKHC_15961:HG2_Ill_SpiralSDKrefine_17376;NumExactMatchSVs=5;ClusterMaxShiftDist=0.064;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.15873;PBcalls=2;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=-1;DistForward=18;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=135;REFWIDENED=8:135358628-135358762;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5495.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:50:0|1:40:5:2:46:./.:0:0:0:0:0/1:32:31:./.:.:.:.:.:.
chr8	135451696	HG4_PB_SVrefine2PBcRDovetail_4913	C	CAATGGAATACAGTGAAAGGTCAGAAATGGATTATAGTAGAAGGTCAGAAATGGAATGCAGTGAAAGGTCAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4599:HG4_PB_HySA_14261:HG2_PB_pbsv_9816:HG4_PB_SVrefine2PBcRDovetail_4913:HG4_PB_SVrefine2Falcon1Dovetail_6024;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4599:HG4_PB_SVrefine2PBcRDovetail_4913:HG4_PB_SVrefine2Falcon1Dovetail_6024;NumExactMatchSVs=3;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.0533333;ClusterMaxEditDist=0.24;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=72;DistBack=92986;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=246;REFWIDENED=8:135451697-135451942;PctSeqSimilarity=0.9743;PctSizeSimilarity=1;PctRecOverlap=0.137;SizeDiff=0;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=70;MatchId=5496.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:0|1:31:6:4:23:./.:0:0:0:0:0/0:36:0:./.:.:.:.:.:.
chr8	135942578	HG2_PB_SVrefine2PBcRplusDovetail_11264	G	GCTGGTAAATGTGCTCTTTCTTCCGCTTTGTAGACCCCTGCTCTATGGTTAACTTTATGTATTATAGTATCCTGGTAAATGTGCCCCTTCTTCCACTTTGGAGACCCCTGCTCTATGGTTAACTTTTTATATTATAGTATCCTGGTAAATGTGCCCCTTCTTCCACTTTGGAGACCCCTGCTCTATGGTTAACTTTTTATATTATAGTATC	10	PASS	ClusterIDs=HG3_PB_pbsv_9561:HG4_PB_SVrefine2PBcRDovetail_4917:HG4_PB_pbsv_9840:HG3_PB_HySA_14716:HG4_PB_HySA_14264:HG2_PB_PB10Xdip_29418:HG2_PB_pbsv_9819:HG2_PB_HySA_17699:HG4_PB_SVrefine2Falcon1Dovetail_6028:HG3_PB_SVrefine2PBcRDovetail_4492:HG3_PB_SVrefine2Falcon1Dovetail_6003:HG2_PB_SVrefine2PBcRplusDovetail_11264:HG2_PB_SVrefine2PB10Xhap12_7139:HG2_PB_SVrefine2Falcon2Bionano_4603:HG2_PB_SVrefine2Falcon1plusDovetail_12055;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4603:HG2_PB_SVrefine2PB10Xhap12_7139:HG2_PB_SVrefine2PBcRplusDovetail_11264:HG3_PB_SVrefine2Falcon1Dovetail_6003:HG3_PB_SVrefine2PBcRDovetail_4492:HG4_PB_SVrefine2Falcon1Dovetail_6028:HG4_PB_SVrefine2PBcRDovetail_4917;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0654206;ClusterMaxSizeDiff=0.0654206;ClusterMaxEditDist=0.354545;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=210;DistBack=134846;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=489;REFWIDENED=8:135942579-135943067;PctSeqSimilarity=0.9888;PctSizeSimilarity=1;PctRecOverlap=0.7251;SizeDiff=0;StartDistance=-58;EndDistance=-58;GTMatch=0;TruScore=90;MatchId=5497.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:1:29:0:25:./.:0:0:0:0:0/1:8:3:./.:.:.:.:.:.
chr8	137039150	HG2_10X_SVrefine210Xhap12_7028	C	CATCTCCTGCCTTGGGACACCTTCATGAAGTTCCTTGTAAAAATAAGTATGCTCTTATCTGCACAACTCTTGCAGTTTTAATAAAGCCTTATTGGGGTATAATTGATATATAAGATTTGCACATATTTGATACATACATTTTGATGGGTTTGGGCGTATGAATGTACCTGTGATGTCTTCAATATAATCAAGGTACTAAATATGGCCATCACCTACAAAAACTGCCTTTCATTCTTTTTTTGTCTGTGTGGTAAAACACTTAAAATGGCATCAATCATCTTTGCATATTAAGTACACAATACCATGTTATAAACTATAGACACTGTGTTCTACAGCAGATCACTAGAACTTATTCATCTCATACAAATTTAACTTTACACTCACTGGACAGCAACTCTCTGTTTTTCCCTCCCCCTCAGTCTCTGACAGTCACCAACAATTCTACTCTCTCCTTCTATGAACTGACTATTTTAGACACCTCAAATAAGAAGAATCATAAAATGTTTAGTTCCTGAAAGTATAGTAGCCAGGACTTTACCCTCCAGACAACAGATTGCGAGAGTCTTTTCTGGGAAATATTACCAGTTCAGGCAGAAAGGCTTACAATCACTGAAATGGTGGTTGCCAGTGAAATGGTCCAACCACATCACCTAACAGTGAGGCTCACAACCAACAAGCTCTGCTCATGTAAATATTTCTAATCATCTTTTTACAGTTCCATTCCTAAACATGAACAGATAAACATGGTTTACCAGACAGGAAAATCAATGCCAAAACCCAACATAATTTAAACATGCTAAGAGATGAAAGACAATACTGGGAGAAAAAAATGTAAAGGAATTAATGCCTATCAATATCATAGAGATGGAAGAAGATGTTATAAATCTAAAATGATAAACAGATACCTAGAACAAAGAGAGACTTATAGAATAAAAAAGAACTCTTAAGAAAAAAAGAGGGCTGAAATAGAGAAGAAGAAAAATAATCAAACAGATAAGATAGGATGATTATAAAAATAGTTTAGAAGGTCCAAAATAAAAATAATAGAAGTCTCGTAAAGTACAGAGAAAACAAATTTAAAAATTTAAATTCTAATTAAAGAACATTTGTCAGAATTAAAAGATATGAATTTTAATTTTGAAGAACACACTCAGACCCCAACAAAACAGATAAAAATAGAAATGCCAAGGAACATTAGAACTCAGTTTCCTATCACTGGAGACAAAACTCCTGAAGTTTCCAAAGAAAATAAAAGCATGTCACATTCAATGTATCACAAACCAAAAAGACTTCAGCTTTTTTTACAAACAACATTTTAAGATTAAAGACAACATAGAGGGCCTTCAAAATTCTGAAAGAACATTATTTATCATTTTAAACCTAGACTTCTATACCCAGCCAAACAAGCATGAAAGTGTAATAAATCTTTTCAGACGCGTACAATCTCAAAACAAAATATAGCCAACCAACCAACCAACAAAAACCCCACAAATACCTCCTAATCTTTTCTCTAAACGTTCCTAGATGTTCTGGAGCAAATGGAAGTGTAGACCTACCTTAGATACAATACAAAAGAAGATATGACATAGGATAAAGGTAGGAGAAAACTTCAAGCTGATGGTAAAAGTATATCTTAGGAATACCACCATGTATCAAATAAAGAATGCCAGAACAGGCTGAAGATAGTCAGAAAAATCCTGCAGAAATTCTTTAGGAAGTTAAACTGATAACATTTCTGATGTACCTGTAAAACTTTTAAGAGGAAATTAAGACAACGAAGAGTTTGGGATTAAATTTTTAAAAGAACATGGGAAACTAAAAAATATACACAAATAGAAATATTAACTCTAAGTAAAACAACAAAAATCCCTGTAGGAAAGGAAACAATCCTAACTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTTAGTTGCTCAGGCTGGAGTGCAGTGGCTCG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29420:HG3_PB_pbsv_9567:HG4_PB_HySA_14281:HG3_PB_SVrefine2Falcon1Dovetail_6007:HG4_PB_SVrefine2Falcon1Dovetail_6033:HG2_PB_SVrefine2Falcon1plusDovetail_12061:HG4_Ill_SVrefine2DISCOVARDovetail_7111:HG2_PB_SVrefine2PBcRplusDovetail_11269:HG2_PB_SVrefine2PB10Xhap12_7145:HG2_PB_SVrefine2Falcon2Bionano_4607:HG2_Ill_SVrefine2DISCOVARplusDovetail_13246:HG2_10X_SVrefine210Xhap12_7028:HG3_Ill_SVrefine2DISCOVARDovetail_7356:HG4_PB_SVrefine2PBcRDovetail_4922:HG3_PB_SVrefine2PBcRDovetail_4496;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7028:HG2_Ill_SVrefine2DISCOVARplusDovetail_13246:HG2_PB_SVrefine2Falcon2Bionano_4607:HG2_PB_SVrefine2PB10Xhap12_7145:HG2_PB_SVrefine2PBcRplusDovetail_11269:HG4_Ill_SVrefine2DISCOVARDovetail_7111;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0314322;ClusterMaxSizeDiff=0.0309252;ClusterMaxEditDist=0.103422;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=1961;DistBack=4691;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=8:137039151-137039155;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5498.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:100:./.:0:1:0:38:./.:0:0:0:0:1/1:0:43:./.:17:159:.:2077:.
chr8	137062191	HG2_PB_SVrefine2PBcRplusDovetail_11270	T	TAAACCTCCCCAGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCAAAAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29421:HG4_PB_pbsv_9847:HG2_PB_pbsv_9826:HG2_PB_HySA_17718:HG2_PB_assemblyticsPBcR_26372:HG2_PB_assemblyticsfalcon_27126:HG2_PB_HySA_17717:HG3_PB_SVrefine2Falcon1Dovetail_6008:HG4_PB_SVrefine2PBcRDovetail_4923:HG4_Ill_MetaSV_5452:HG4_Ill_GATKHCSBGrefine_6843:HG3_Ill_MetaSV_5393:HG3_Ill_GATKHCSBGrefine_6616:HG2_PB_SVrefine2PBcRplusDovetail_11270:HG2_PB_SVrefine2PB10Xhap12_7146:HG2_PB_SVrefine2Falcon2Bionano_4608:HG2_Ill_MetaSV_5222:HG2_Ill_GATKHCSBGrefine_6721:HG2_10X_SVrefine210Xhap12_7029:HG2_PB_SVrefine2Falcon1plusDovetail_12062:HG4_PB_HySA_14282:HG2_Ill_breakscan11_4015:HG4_PB_SVrefine2Falcon1Dovetail_6034;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7029:HG2_Ill_GATKHCSBGrefine_6721:HG2_Ill_MetaSV_5222:HG2_PB_SVrefine2Falcon2Bionano_4608:HG2_PB_SVrefine2PB10Xhap12_7146:HG2_PB_SVrefine2PBcRplusDovetail_11270:HG3_Ill_GATKHCSBGrefine_6616:HG3_Ill_MetaSV_5393:HG4_Ill_GATKHCSBGrefine_6843:HG4_Ill_MetaSV_5452;NumExactMatchSVs=10;ClusterMaxShiftDist=0.131045;ClusterMaxSizeDiff=0.131045;ClusterMaxEditDist=0.167963;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=318;DistBack=22964;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=8:137062192-137062205;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5499.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:./.:2:3:0:13:./.:0:0:0:0:1/1:0:20:1/1:1:65:.:.:.
chr8	137270008	HG4_PB_HySA_14287	A	ATATATATATATGTATATATATATATATATATATATATGTATATATATATATATATATATATATGTATATATATATATATG	20	PASS	ClusterIDs=HG4_PB_pbsv_9848:HG4_PB_HySA_14287:HG2_PB_HySA_17724:HG4_Ill_GATKHCSBGrefine_6844:HG2_PB_pbsv_9827;NumClusterSVs=5;ExactMatchIDs=HG4_PB_HySA_14287;NumExactMatchSVs=1;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.233766;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=80;DistBack=1;DistForward=3;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=83;REFWIDENED=8:137269973-137270055;PctSeqSimilarity=0.9742;PctSizeSimilarity=0.9375;PctRecOverlap=0.4938;SizeDiff=5;StartDistance=38;EndDistance=38;GTMatch=0;TruScore=80;MatchId=5500.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:46:0|1:31:3:3:37:./.:0:0:0:0:0/1:17:6:./.:.:.:.:.:.
chr8	137967852	HG2_PB_SVrefine2Falcon2Bionano_4610	A	ACTCCCTCCCTCCCTTTCTCCCTCCCTCCCTCCCTTCCTTCTTTTCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCTCCTTCTCCCTCCCTCCCTCCCTTCTCCTTCCTCCTCCTCCCTTCCTCTCCTCCCTCCTCCTTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTTCCTCCTTCCTCCCTCCCTTCCCTCCTCCCTCCTCCTTCTTCCTCCTCCCTCCCTTCCTCCTTCCCTCCCTCCCTTCCTTCCCTTCCTCCCTCCCTCCCTTCCTTCTTCCCTCCCTCCCTCCTCCCTTCCTTCTTCCTCCCCCTCCCTTCCTTCCCTCCCTCCCTCCCTTCTTCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCTTCTTCCTTCCTCCTCCTTCCCTTCCTCCTCCCTCCCTCCCTCCCTCTCCTTCCTCCCTCCTCCCTTCCTCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCTCCCTCCTTCCTTCCTCCCTCCTCCCTCCCTTCTCCTTCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCTCCTTCCTTCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCCTCCCTTCTTCCTTCCTCCTCCTCCTTCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCTCCCTCCCTCCCTTCCTTCCTCCCTCCTCCCTCCCTCCCTTCTTCCTCCCTCCCTTCCTCTTCCTCCTCCCTCCCTCCCTTCTTCCTCCCTCCCTCCCTTCCTTCCTTCCTCCCTCCCTTCCTTCCTCCTCCTTCCTCCCTTCTTCCTCCCTCCCTCCCTCCCTTCTTCCTTCCTCCCTCCCTCCCTTCTCCTCCCTCCTCCCTTCTTCCTCCCTCCTCCCTCCCTTCTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCTTCTTCCTTCTTCCTTCCTCCCTCCCTCCTTCTTCCTTCCTCCTCCCTCCCTTCTTCCTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCTTCTTCCTCCCTCCCTCCCTCCCTTCTTCCTCCTTCCTCCCTTCTTCCTCCCTCCTCCCTTCTCCTCCCTCCCTCCCTCCTTCTTCCTCCCTCCTCCTTCTTCCTCCCTCCTCCCTTCTCCTCCCTCCCTCCTCCCTTCTTCCTCCCTCCCTCCTCTTCCTCCCTCCTCCCTTCTTCCTCCCTCCCTCCTTCTTCCTCCCTCCCCCCTCCTTCTTCCTTCTTCCTCCCTCCCTCCCTTCTTCCTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11272:HG4_PB_SVrefine2Falcon1Dovetail_6036:HG2_PB_SVrefine2Falcon2Bionano_4610:HG3_PB_SVrefine2Falcon1Dovetail_6010:HG2_PB_SVrefine2PB10Xhap12_7148:HG2_PB_SVrefine2Falcon1plusDovetail_12064:HG4_PB_pbsv_9850;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4610;NumExactMatchSVs=1;ClusterMaxShiftDist=0.162819;ClusterMaxSizeDiff=0.162819;ClusterMaxEditDist=0.253803;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1271;DistBack=117080;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=8:137967853-137967892;PctSeqSimilarity=0.952;PctSizeSimilarity=0.9244;PctRecOverlap=0.9105;SizeDiff=-104;StartDistance=-71;EndDistance=-71;GTMatch=1;TruScore=92;MatchId=5501.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:34:1/1:1:21:1:12:./.:0:0:0:0:./.:3:0:0/1:19:42:.:1241:.
chr8	138295183	HG2_PB_SVrefine2Falcon2Bionano_4613	A	ACTGAAGGTATTGTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGGGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_14748:HG2_Ill_manta_2824:HG2_PB_assemblyticsfalcon_27139:HG2_PB_SVrefine2Falcon1plusDovetail_12065:HG4_PB_SVrefine2Falcon1Dovetail_6041:HG2_PB_HySA_17741:HG3_PB_pbsv_9580:HG4_Ill_MetaSV_5455:HG4_PB_pbsv_9855:HG3_Ill_MetaSV_5400:HG2_Ill_MetaSV_5225:HG2_PB_PB10Xdip_29430:HG2_PB_pbsv_9835:HG2_PB_assemblyticsPBcR_26391:HG2_PB_HySA_17740:HG4_PB_SVrefine2PBcRDovetail_4926:HG2_PB_SVrefine2PB10Xhap12_7152:HG2_PB_SVrefine2PBcRplusDovetail_11274:HG2_PB_SVrefine2Falcon2Bionano_4613:HG2_10X_SVrefine210Xhap12_7035:HG3_PB_SVrefine2PBcRDovetail_4503:HG3_PB_SVrefine2Falcon1Dovetail_6014;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7035:HG2_PB_SVrefine2Falcon2Bionano_4613:HG2_PB_SVrefine2PBcRplusDovetail_11274;NumExactMatchSVs=3;ClusterMaxShiftDist=0.121495;ClusterMaxSizeDiff=0.121495;ClusterMaxEditDist=0.227545;PBcalls=17;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=317;DistBack=44904;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=8:138295184-138295195;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5502.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:1/1:0:22:0:10:./.:0:0:0:0:1/1:0:11:1/1:1:81:.:.:.
chr8	138607686	HG2_PB_SVrefine2Falcon1plusDovetail_12068	A	ATGTATATATACACACACTTATGTAAGTATATGTATATATGTGTGTATATACACACGTGGATATAAGTATATGTATATATGTGTGTGTATATATACACGTATATATGTATATATACACGTATACATATATACG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7156:HG4_PB_pbsv_9859:HG2_Ill_breakscan11_4016:HG4_PB_HySA_14313:HG3_PB_HySA_14754:HG2_PB_PB10Xdip_29433:HG4_Ill_GATKHCSBGrefine_6860:HG3_Ill_manta_2309:HG3_Ill_GATKHCSBGrefine_6633:HG2_Ill_manta_2826:HG2_PB_HySA_17747:HG2_PB_pbsv_9839:HG4_PB_SVrefine2PBcRDovetail_4929:HG2_PB_SVrefine2PBcRplusDovetail_11277:HG4_PB_SVrefine2Falcon1Dovetail_6044:HG4_Ill_SVrefine2DISCOVARDovetail_7120:HG3_PB_SVrefine2Falcon1Dovetail_6017:HG2_PB_SVrefine2Falcon2Bionano_4616:HG2_PB_SVrefine2Falcon1plusDovetail_12068:HG3_PB_SVrefine2PBcRDovetail_4505:HG3_PB_pbsv_9583;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12068:HG2_PB_SVrefine2Falcon2Bionano_4616:HG3_PB_SVrefine2Falcon1Dovetail_6017:HG4_Ill_SVrefine2DISCOVARDovetail_7120:HG4_PB_SVrefine2Falcon1Dovetail_6044:HG4_PB_SVrefine2PBcRDovetail_4929;NumExactMatchSVs=6;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.13986;ClusterMaxEditDist=0.308219;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=132;DistBack=12414;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=8:138607687-138607741;PctSeqSimilarity=0.9639;PctSizeSimilarity=0.9565;PctRecOverlap=0.6619;SizeDiff=-6;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=86;MatchId=5503.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:1:34:0:41:./.:0:0:0:0:0/1:18:23:./.:.:.:.:.:.
chr8	139218428	HG2_PB_SVrefine2PBcRplusDovetail_11281	G	GCATCCCCTTCACTACCCACAGCTCTCTCATCCCCTCCACCTACACACAGCTCTCTCATCCCCTCCACCTACACACAGCTCTATCATCCCCTCCACCTACGCACAGCTCTATCATCCCCTCCACCTACCCACAGCTCTATCATCCCCTCCACCTACCCACAGCTCTATCATCCCCTCCACCTACACACAACTCTATCATCCCCTCCACCTACACACAACTCCAGCATCCCCTCCACCTACACACAACTCTATCATCCCCTCCACCTACACACAACTCCAGCATCCCCTCCATCTACCCACAGCTCTATCATCCCCTCCACCTACACACAACCCTATCATCTCCTCCACCTACACACAACTCCAGCATCCCCTCCCCCTACACACAGTTCTATCATCCCCTCCACCTACACACAACTCTATCATCCCCTCCACCTACCCACAGCTCTATCATCCCCTCCACCTAGCCACAGCTCTATCATCCCCTCCATCTACACACAACTCCAGTATCCCCTCCACCTAGCCACAACTCTATCATCTCCTCCACCTACTCACAGCTCTATCATCCCCTCCACCTACCCACAGCTCTATCATCCCCTCCATCTACACACAAATCCAGCATACCCTCCACCTACACAAAACTCTATCATCCCTTCCACCTACCCACAGCTCTATCATCCCCTCCATCTACACACAACCACAGCATCCCCTCCACCTACCCACAACTCTATCATCCCCTCAATCTATGCACAGCTCTATCATCCCCTCCACCTACACACAACTCTATCATTCCCTCCACCTACACACAACTCCAACATCCCCTCCACCTACCCACAGCTCTATCATCCCCTCCACCTACACACAGCTCTATCATCCCCTCCACCTACCCACAGCTCTATCATCCCCTCCACCTACACACAGCTCTATCATCCCCTCCACCTACACACAATTCTATCATCCCCTCCACCTACACACAACTCCAGCATCCCCTCCACCTACACACAGCTCTATCATCCCCTCCACCTACCCACGGCTCTATCATCCCCTCCACCTACACACAACTCCAGCATCCCCTCCACCTACCCACAACTCTATCATCCCCTCCACCTACACACAGCTCTATCATCTCCTCCACCTACACACAGCTCTATCATCCCCTCCACCTACACACAACTCCAGCATCCCCTCCACCTACACACAGCTCTATCATCCCCTCGACCTACCCACAGCTCTATCATCCCCTCCATCTACACACAACTCCAGCATCCCCTCCACCTACACACAACGCTATCATCCCCTCTACCTACACACAACTCCAGCATCCCCTCCCCCTACACACAGTTCTATCATCCCCTCCACCTACACACAACTCTATCATCCCCTTGATCTATGCACAGCTCTATCATCCCCTCCACCTACCCACAACTCTAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12072:HG4_PB_pbsv_9862:HG2_PB_PB10Xdip_29435:HG3_PB_pbsv_9589:HG4_PB_HySA_14325:HG2_PB_HySA_17759:HG4_PB_SVrefine2Falcon1Dovetail_6048:HG2_PB_SVrefine2PB10Xhap12_7159:HG4_PB_SVrefine2PBcRDovetail_4932:HG2_PB_SVrefine2PBcRplusDovetail_11281:HG2_PB_SVrefine2Falcon2Bionano_4620:HG3_PB_SVrefine2Falcon1Dovetail_6021;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4620:HG2_PB_SVrefine2PBcRplusDovetail_11281:HG4_PB_SVrefine2PBcRDovetail_4932;NumExactMatchSVs=3;ClusterMaxShiftDist=0.07101;ClusterMaxSizeDiff=0.0572216;ClusterMaxEditDist=0.218022;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1427;DistBack=58;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=664;REFWIDENED=8:139218429-139219092;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9993;PctRecOverlap=0.8901;SizeDiff=-1;StartDistance=-156;EndDistance=-156;GTMatch=1;TruScore=96;MatchId=5504.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:67:1/1:1:24:2:15:./.:0:0:0:0:./.:0:0:./.:8:136:.:1570:.
chr8	139325965	HG3_Ill_GATKHCSBGrefine_6637	T	TAAGATACAAGCTACGGCCGGGCGCGGTGGCTCGTGCCTGTAATCCTAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTTTCTACTAAAAATACAAAAAATTAGCCGGGCGTGTTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_17760:HG3_PB_pbsv_9590:HG4_PB_pbsv_9863:HG2_PB_pbsv_9844:HG2_PB_assemblyticsPBcR_26411:HG2_PB_assemblyticsfalcon_27156:HG4_PB_HySA_14326:HG4_PB_SVrefine2Falcon1Dovetail_6049:HG4_PB_SVrefine2PBcRDovetail_4933:HG4_Ill_manta_2418:HG4_Ill_MetaSV_5460:HG4_Ill_GATKHCSBGrefine_6863:HG3_PB_SVrefine2PBcRDovetail_4508:HG3_Ill_manta_2312:HG3_Ill_MetaSV_5404:HG3_Ill_GATKHCSBGrefine_6637:HG2_PB_SVrefine2PBcRplusDovetail_11282:HG2_PB_SVrefine2PB10Xhap12_7160:HG2_PB_SVrefine2Falcon2Bionano_4621:HG2_Ill_MetaSV_5229:HG2_Ill_GATKHCSBGrefine_6738:HG2_10X_SVrefine210Xhap12_7042:HG3_PB_SVrefine2Falcon1Dovetail_6023:HG2_PB_SVrefine2Falcon1plusDovetail_12073:HG2_PB_PB10Xdip_29436:HG3_PB_HySA_14765:HG2_Ill_breakscan11_4017;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7042:HG2_Ill_GATKHCSBGrefine_6738:HG2_Ill_MetaSV_5229:HG2_PB_SVrefine2Falcon2Bionano_4621:HG2_PB_SVrefine2PB10Xhap12_7160:HG2_PB_SVrefine2PBcRplusDovetail_11282:HG3_Ill_GATKHCSBGrefine_6637:HG3_Ill_MetaSV_5404:HG3_Ill_manta_2312:HG3_PB_SVrefine2PBcRDovetail_4508:HG4_Ill_GATKHCSBGrefine_6863:HG4_Ill_MetaSV_5460:HG4_Ill_manta_2418:HG4_PB_SVrefine2PBcRDovetail_4933;NumExactMatchSVs=14;ClusterMaxShiftDist=0.121795;ClusterMaxSizeDiff=0.121795;ClusterMaxEditDist=0.224359;PBcalls=17;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=313;DistBack=46920;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=8:139325966-139325979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5505.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:27:0:25:./.:0:0:0:0:1/1:0:20:1/1:2:62:.:.:.
chr8	140081516	HG3_PB_HySA_14779	A	AAATTTCAACACCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_14779:HG2_PB_pbsv_9852:HG2_PB_HySA_17778:HG2_PB_HySA_17777:HG2_PB_assemblyticsfalcon_27171:HG2_Ill_breakscan11_4020:HG2_PB_SVrefine2Falcon2Bionano_4627:HG2_PB_SVrefine2Falcon1plusDovetail_12080:HG3_PB_SVrefine2PBcRDovetail_4513:HG3_PB_SVrefine2Falcon1Dovetail_6028:HG3_PB_pbsv_9595;NumClusterSVs=11;ExactMatchIDs=HG3_PB_HySA_14779;NumExactMatchSVs=1;ClusterMaxShiftDist=0.126471;ClusterMaxSizeDiff=0.123919;ClusterMaxEditDist=0.215827;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=10488;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:140081517-140081531;PctSeqSimilarity=0.9601;PctSizeSimilarity=0.9341;PctRecOverlap=0.937;SizeDiff=-23;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=5508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:41:27:./.:20:14:17:14:./.:0:0:0:0:0/1:29:4:0/1:10:17:.:.:.
chr8	140100918	HG2_PB_SVrefine2PBcRplusDovetail_11289	A	AGAGGGAAGGGAAGGGAAGGGAAGGGAAGTGGAGGGGAGCGGAGGAGAGGGGAGAAGAGTGGAGGGGAGAGGAGGGGAGGGGAGAGGGGAGGGGAGGGGTAGGGGAGAGGAGGGGAGGGGAGAGGATGGGAGGGGAGAGGAGGGGAGGAGAGGGGG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4514:HG2_PB_pbsv_9853:HG4_PB_pbsv_9872:HG2_10X_SVrefine210Xhap12_7047:HG2_Ill_breakscan11_4021:HG2_PB_HySA_17779:HG4_PB_HySA_14339:HG2_PB_PB10Xdip_29440:HG3_PB_HySA_14780:HG4_PB_SVrefine2Falcon1Dovetail_6056:HG2_Ill_SVrefine2DISCOVARplusDovetail_13260:HG4_PB_SVrefine2PBcRDovetail_4939:HG3_PB_pbsv_9596:HG4_Ill_SVrefine2DISCOVARDovetail_7132:HG2_PB_SVrefine2PBcRplusDovetail_11289:HG2_PB_SVrefine2PB10Xhap12_7167:HG2_PB_SVrefine2Falcon2Bionano_4628:HG2_PB_SVrefine2Falcon1plusDovetail_12081:HG3_PB_SVrefine2Falcon1Dovetail_6029;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4628:HG2_PB_SVrefine2PB10Xhap12_7167:HG2_PB_SVrefine2PBcRplusDovetail_11289:HG4_Ill_SVrefine2DISCOVARDovetail_7132:HG4_PB_SVrefine2PBcRDovetail_4939;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0781759;ClusterMaxSizeDiff=0.0781759;ClusterMaxEditDist=0.263158;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=155;DistBack=19387;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=8:140100919-140100941;PctSeqSimilarity=0.994;PctSizeSimilarity=1;PctRecOverlap=0.929;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=97;MatchId=5509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:1/1:1:14:0:13:./.:0:0:0:0:1/1:0:20:./.:.:.:.:.:.
chr8	140170191	HG2_PB_SVrefine2Falcon2Bionano_4631	C	CTCGGTATGTGAGAAAAGACAGAGTGTCTTTCCATTGTCCAGGACAGGTCAGTACAGATGTGACTTTTTTTTTTTTTTTCTTAACCTTGGAGTTTCTTCATTACAAAAGACCCTCATCAGGTATGGGCTGACCCAAGCCTGTCTAGGAAGACAACCTGCATTGTCTCCTCACTTTGTGTCTGTCTTTGCCAAGCTACAAAGTCAAGATAAAGGTGGAGTATTGTTATAGAATAGCCTTTGTGTGGGACTCTCCATTGACTGAGGGAGTTAGTTAAAAGGTAATAGGCAGGTGTTGTGATATTGTGACTAAATGGATAGAAAGCAGTAAAAGACCAGTGAGACATGGAGCCCAGAACTTCTGTTTCAAGGTGACCCACATGCATTTAATTCACGTGTGGATATTCTACCTGGCCTGTGTGTGTGTGAGGTCAAAGAAAGCTGTGAATTGGAAAAGCTTCTGGGTCCTCTAATAAGATGAAGATAATGGAGATGATGTCCTTCCTGTCCTAGATTTATATTTGGCTAAAGCCAAGAGTGTCTTCTGAGTTTCCACATCTAACCCCAATACTACAGTTGAGCATGTATATGATGCTCATCCCAGAATGGAGAGTGGCAGTAGAAGTTATCTCAACTGTGTCTGAGTGCTGGGCTCTTGAAGTAACTGTTTTATTTGCCTCAACTAGCTCGAGAAGCTAAGACTGTGTTGGCAGCATCTCTTCCCTTCAAATACCTAAGGGTAGGAGAGGTTCACCTGTCTCTGCTCCATCTGAGCTCTTATTCCTGAAGCCAGAGAGGCATGTTTCTTTATTGTACAATATGTTCTGAAGCCGGGAATAAGGAGTTTAATGGGCAGAGAGTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6058:HG4_PB_HySA_14341:HG4_Ill_Spiral_819:HG3_PB_pbsv_9598:HG2_PB_pbsv_9856:HG4_PB_pbsv_9874:HG2_PB_PB10Xdip_29445:HG2_Ill_breakscan11_4022:HG2_PB_assemblyticsfalcon_27175:HG2_PB_assemblyticsPBcR_26430:HG3_Ill_MetaSV_5408:HG3_PB_SVrefine2PBcRDovetail_4515:HG2_Ill_MetaSV_5235:HG3_Ill_SVrefine2DISCOVARDovetail_7373:HG3_Ill_GATKHCSBGrefine_6641:HG2_PB_SVrefine2PB10Xhap12_7171:HG2_PB_SVrefine2Falcon2Bionano_4631:HG2_Ill_SVrefine2DISCOVARplusDovetail_13262:HG3_PB_SVrefine2Falcon1Dovetail_6031:HG4_PB_SVrefine2PBcRDovetail_4941:HG4_Ill_SVrefine2DISCOVARDovetail_7134:HG4_Ill_MetaSV_5464:HG4_Ill_GATKHCSBGrefine_6867:HG2_10X_SVrefine210Xhap12_7049:HG2_PB_SVrefine2PBcRplusDovetail_11292:HG2_PB_SVrefine2Falcon1plusDovetail_12083;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13262:HG2_PB_SVrefine2Falcon2Bionano_4631:HG2_PB_SVrefine2PB10Xhap12_7171:HG3_Ill_GATKHCSBGrefine_6641:HG3_Ill_SVrefine2DISCOVARDovetail_7373;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0679887;ClusterMaxSizeDiff=0.0668555;ClusterMaxEditDist=0.180301;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=858;DistBack=8633;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=8:140170192-140170193;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5510.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:0:35:2:30:./.:0:0:0:0:1/1:0:33:./.:12:113:.:870:.
chr8	140973040	HG2_PB_SVrefine2PB10Xhap12_7179	AGT	TGTCAAGTCCGGACTCTGCCTCTCGCCAGCTGTAGGCCAGGACTCACCAATCTCTCCGTCCTCAACGGAGAAGCCAGAATCCTGCCTGTTAGCCAGAGTTGTGGAGAGGACGGTGACCATGTGGGGGACACCCAAGCACCCCACCTGGCCCTCAGGAAGAGCCCCAAGTGACAGAGCTGCTGTCCCTTCTGCACTCCTGCCACTGCAGCTGGTGGGGCTCAGCTTGCATGGGGGCTCCACAGCAAGTCACAATCTGTTCCCAGTGGTGCCCGCGAGGAGCCAGTAGGGACAAATAATGGTTGTTCGGTGGCTTAACCCCTAACGTTTTAGGATTTCCCTTCAGGGTCCACGTGTCCCCAATACCAAGTTCCATAAAACAAGCAAACAAATAACAAAACATCTCCTTTTGTAACCCCTTCAGAGCTAGAGACAGGAAGAGAAAAACAAACAAGGCAGATTACAGGACATGAGATCCCAACACAGAACGTCCTTCTCCTGGTATATGCTGAAGAGGAGGACAGCAGGAAACCCACATGTGTCCTCGGACAAACCCACGTGTGTCCTCAGCTGCGCCTGCACATTTCTACCGTCTGCCCACTACACAGAGCAGGGATAGCTGTGAGCACACAGGCTCTGGTTCAAGGGCCTTCTTTCTATATGATGGCAGTAGCTGCTGCCATCATGCCGGCTGTGGCAGGGAGCATGGCAGGGAGGCATGGCTGGGGCTGTATACTCCATGGAGCCAGTGAGAGCCCCACCCCTTCTGAATTGGAGTGGGAGCACCTGGGGTGCCACAGCTGCCCAAACCACCACCCAAACCATAGCTGCAGACCCAGGCCTCCTGCTCTACGGAGCAGGCAGGAGCCCCACCCTACTGGGCAGGGCTACAGCCACTGAAACTGCAGCTATGGAGCCAAGCCTCCCTGTGCTCTCAGGGGAGCCAGGAACAGGCAGGAACTGCCTTCCCAGGTGTGGTTGCAGCCATCCTCCCAGGTGCAGGACCTGGGCGTTTCTGCAGCCTGTAGCCTGCACCCTTGGGGGCCCCAGAAAGGACCCTCCCCTTGTCCCTGCAGGCTCAGGGGTGTCTGCTCCCACTGCCTGGCCTCTCTCAGCTCCTGGTGCCTGCTCTGATCTCAAAGCGGGGGACTTGTGCTGCCTCTTCTGGACCCACCCATGGCTGCCTATGGACCAGTCGGCAGGCACTTCCTCGCCTGTGAGGTTTATAAAAGCCCCAGACTCAGCCAGGGCAGAAGAGAGGATGACAGAGGATAGCCAGAGGACAAACAGGGCAGAGAGATGACGGGATGACCAGCTGCAGAGACAAATAACCCCTCTGCTGATAGCTGGAGATGATGGGACAACCAGCTGCAGAGAGGAGCTCCTCTCTCTGCTGAGAACTGCAGACATCAGGACAACCAGTTTCAGAGGAGCTACCCTCTCCAGGGCCTCTTCTCTGCTGAGAACTGAACACTTGAAGGATGACTTGCCTACAAAGAGGAGCTATCCACTGTGGTCTCCTCTAGCTGTTGTAACACTCAATGACGCTCATCTTCATCTTGTTCACCCTTCATATGTCTTTGTACCTCAGTCTTCCTGGATGCAGGACAAGAACTCGGGCAAAGGCACCACTGGCCGCAGAGATTTCCGGGAAGAAAATCGGCACTCCAAAGATCCCAAGATCCCAGAACAGTAAGATTCAGTGTCTGTAATATATCACATGCTAAATAGCTATTATAACACATCAGAATAAACTTGATAGCCATCCATAAGCCGTGAAGCTGAGCAAAGGCACCAAGGTGTAAGAACACAAGTTGTATGTTCTCTTTTTTTCATTCATCCATTCATTCAACACACACACAGTATTTGTGGTTTTTCAGTAGTATCTATCATCCAAACACCATCATATCCTGCCTCTTCCATCTAGTCATTGGAACATTTATCCATGTTGCCAGAATAAACTTGGGGTGAGCCTGAAGTTGGACCTTGACGTGGTGCCAGACATCAGTCCCAATCCTGGAGAACCCACTGCCATTCTCCCAGCCCCACTGGAAGCATGTGGCCACGGTGACCAGGAGGACACATGGACTTTCACAGCAGGACCCAAAGAGCTTCTGCAAGAACCCACCAGAGCTCCCTCCCCGGTCAGCTCAGGGAGGCCCAGCATCACAGCCTTGAGCAGCATAAGGGTCCTTATAATGGAGAGAGGGAGGCAGTTGGGTTGGAGCCACAGAAGGAGGCAAACTTATGCAGAGGCTGGAGGGAGGCTGGGCCATGAGCCAAGGAGTGCAGGGGCCTCAGGA	20	PASS	ClusterIDs=HG2_Ill_Spiral_704:HG3_PB_pbsv_9603:HG2_PB_pbsv_9865:HG4_PB_pbsv_9884:HG3_PB_SVrefine2Falcon1Dovetail_6038:HG4_PB_SVrefine2PBcRDovetail_4945:HG4_Ill_SVrefine2DISCOVARDovetail_7138:HG3_PB_SVrefine2PBcRDovetail_4520:HG3_Ill_SVrefine2DISCOVARDovetail_7375:HG2_PB_SVrefine2PBcRplusDovetail_11298:HG2_PB_SVrefine2PB10Xhap12_7179:HG2_PB_PB10Xdip_29454:HG2_Ill_SVrefine2DISCOVARplusDovetail_13264:HG2_10X_SVrefine210Xhap12_7055:HG2_PB_SVrefine2Falcon2Bionano_4634:HG4_PB_SVrefine2Falcon1Dovetail_6064:HG2_PB_SVrefine2Falcon1plusDovetail_12088:HG4_Ill_Spiral_820:HG3_Ill_Spiral_10484;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7055:HG2_Ill_SVrefine2DISCOVARplusDovetail_13264:HG2_PB_PB10Xdip_29454:HG2_PB_SVrefine2PB10Xhap12_7179:HG2_PB_SVrefine2PBcRplusDovetail_11298:HG3_Ill_SVrefine2DISCOVARDovetail_7375:HG3_PB_SVrefine2PBcRDovetail_4520:HG4_Ill_SVrefine2DISCOVARDovetail_7138:HG4_PB_SVrefine2PBcRDovetail_4945;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0579159;ClusterMaxSizeDiff=0.0570704;ClusterMaxEditDist=0.178193;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=2297;DistBack=-3;DistForward=2789;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:140973043-140973039;PctSeqSimilarity=0.9996;PctSizeSimilarity=1;PctRecOverlap=0.9991;SizeDiff=0;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5511.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:82:1/1:1:17:0:36:./.:0:0:0:0:1/1:0:35:1/1:8:257:.:2337:.
chr8	141048048	HG2_PB_SVrefine2Falcon1plusDovetail_12090	G	GAAAGCTGTATTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_17795:HG2_PB_pbsv_9867:HG4_PB_pbsv_9886:HG4_PB_HySA_14355:HG3_PB_pbsv_9605:HG2_PB_assemblyticsfalcon_27187:HG2_PB_SVrefine2Falcon1plusDovetail_12090:HG3_PB_SVrefine2Falcon1Dovetail_6040:HG2_Ill_breakscan11_4023;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12090;NumExactMatchSVs=1;ClusterMaxShiftDist=0.131994;ClusterMaxSizeDiff=0.131994;ClusterMaxEditDist=0.191582;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=344;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=8:141048049-141048062;PctSeqSimilarity=0.9914;PctSizeSimilarity=0.9829;PctRecOverlap=0.9829;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:29:./.:7:8:9:14:./.:0:0:0:0:0/1:15:9:0/1:10:41:.:.:.
chr8	141361270	HG2_PB_SVrefine2Falcon1plusDovetail_12094	T	TGAGAGACACAGGCCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAATGGTGAAACCCCGTCTCTACCAAAAATACAAAAATTAGCCGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6066:HG2_PB_PB10Xdip_29465:HG4_PB_assemblyticsfalcon_26608:HG4_PB_pbsv_9890:HG2_PB_pbsv_9872:HG2_PB_assemblyticsfalcon_27194:HG4_Ill_MetaSV_5467:HG2_PB_SVrefine2PB10Xhap12_7186:HG2_Ill_GATKHCSBGrefine_6747:HG2_PB_SVrefine2Falcon1plusDovetail_12094:HG2_PB_HySA_17804;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12094;NumExactMatchSVs=1;ClusterMaxShiftDist=0.138462;ClusterMaxSizeDiff=0.138462;ClusterMaxEditDist=0.184615;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=324;DistBack=1713;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=8:141361271-141361286;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5513.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:29:./.:35:7:8:13:./.:0:0:0:0:0/1:17:11:0/1:6:21:.:.:.
chr8	141511280	HG3_Ill_manta_2314	A	AGGAGTCATTCTTGATTCCTTTTTTCACTCCTAACCCATCCAATCCATCACTAAATCCTATTGATTTCACCATCCAAACACTTCCCAAATTGTCCAGGCTTCTCTGCATCCAATGCCACCTCTCCATTCAGAAGCACTATCAATTTCTCCCTGAACTGCCTCCTACGTGGTCTCCTGCTTCTGTGCTTGGC	20	PASS	ClusterIDs=HG3_PB_pbsv_9609:HG2_PB_HySA_17806:HG3_PB_HySA_14808:HG4_PB_SVrefine2PBcRDovetail_4951:HG4_PB_pbsv_9892:HG3_Ill_SVrefine2DISCOVARDovetail_7381:HG2_PB_SVrefine2PBcRplusDovetail_11306:HG2_PB_SVrefine2PB10Xhap12_7187:HG2_PB_SVrefine2Falcon2Bionano_4637:HG2_PB_SVrefine2Falcon1plusDovetail_12096:HG2_10X_SVrefine210Xhap12_7059:HG2_PB_PB10Xdip_29466:HG2_Ill_breakscan11_4024:HG4_PB_HySA_14368:HG4_PB_assemblyticsfalcon_26611:HG4_PB_SVrefine2Falcon1Dovetail_6068:HG4_Ill_svaba_12524:HG4_Ill_manta_2420:HG4_Ill_SVrefine2DISCOVARDovetail_7145:HG4_Ill_GATKHCSBGrefine_6877:HG3_PB_SVrefine2PBcRDovetail_4524:HG3_PB_SVrefine2Falcon1Dovetail_6044:HG3_Ill_svaba_12565:HG3_Ill_manta_2314:HG3_Ill_Spiral_10491:HG3_Ill_GATKHCSBGrefine_6651:HG2_PB_assemblyticsfalcon_27196:HG2_PB_assemblyticsPBcR_26453:HG2_PB_SVrefine2Falcon1plusDovetail_12095:HG2_Ill_svaba_12439:HG2_Ill_SpiralSDKrefine_17440:HG2_Ill_SVrefine2DISCOVARplusDovetail_13269:HG2_Ill_GATKHCSBGrefine_6748:HG2_PB_pbsv_9873;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6748:HG2_Ill_SVrefine2DISCOVARplusDovetail_13269:HG2_Ill_SpiralSDKrefine_17440:HG2_Ill_svaba_12439:HG2_PB_SVrefine2Falcon1plusDovetail_12095:HG2_PB_assemblyticsPBcR_26453:HG2_PB_assemblyticsfalcon_27196:HG3_Ill_GATKHCSBGrefine_6651:HG3_Ill_Spiral_10491:HG3_Ill_manta_2314:HG3_Ill_svaba_12565:HG3_PB_SVrefine2Falcon1Dovetail_6044:HG3_PB_SVrefine2PBcRDovetail_4524:HG4_Ill_GATKHCSBGrefine_6877:HG4_Ill_SVrefine2DISCOVARDovetail_7145:HG4_Ill_manta_2420:HG4_Ill_svaba_12524:HG4_PB_SVrefine2Falcon1Dovetail_6068:HG4_PB_assemblyticsfalcon_26611;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0942408;ClusterMaxSizeDiff=0.0829016;ClusterMaxEditDist=0.266332;PBcalls=19;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=190;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7793;REFWIDENED=8:141511281-141501492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5514.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:0:11:0:13:./.:0:0:0:0:1/1:0:11:./.:.:.:.:.:.
chr8	141960142	HG4_Ill_GATKHCSBGrefine_6879	A	AACCTGCCTGTGGAAAGGAGCTACCCACTGCAGGTCTCCTCTCTGCTGAGACCTGGACACTCATTGGGATG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29468:HG4_PB_pbsv_9895:HG3_PB_pbsv_9612:HG2_PB_pbsv_9876:HG3_PB_HySA_14818:HG2_Ill_breakscan11_4025:HG4_PB_SVrefine2Falcon1Dovetail_6070:HG4_PB_SVrefine2PBcRDovetail_4953:HG4_Ill_svaba_12531:HG4_Ill_manta_2422:HG4_Ill_SVrefine2DISCOVARDovetail_7148:HG4_Ill_Krunchall_13998:HG4_Ill_GATKHC_16072:HG4_Ill_GATKHCSBGrefine_6879:HG4_Ill_250bpfermikitraw_13330:HG4_Ill_150bpfermikitraw_12781:HG3_PB_SVrefine2PBcRDovetail_4526:HG3_PB_SVrefine2Falcon1Dovetail_6046:HG3_Ill_svaba_12575:HG3_Ill_manta_2316:HG3_Ill_Spiral_10497:HG3_Ill_SVrefine2DISCOVARDovetail_7384:HG3_Ill_Krunchall_13441:HG3_Ill_GATKHC_16003:HG3_Ill_GATKHCSBGrefine_6652:HG3_Ill_250bpfermikitraw_13052:HG3_Ill_150bpfermikitraw_12654:HG2_PB_SVrefine2PBcRplusDovetail_11308:HG2_PB_SVrefine2PB10Xhap12_7189:HG2_PB_SVrefine2Falcon2Bionano_4639:HG2_PB_SVrefine2Falcon1plusDovetail_12098:HG2_Ill_svaba_12450:HG2_Ill_manta_2838:HG2_Ill_SpiralSDKrefine_17444:HG2_Ill_SVrefine2DISCOVARplusDovetail_13271:HG2_Ill_Krunchall_13768:HG2_Ill_GATKHC_16066:HG2_Ill_GATKHCSBGrefine_6749:HG2_Ill_250bpfermikitraw_13446:HG2_Ill_150bpfermikitraw_12623:HG2_10X_SVrefine210Xhap12_7060;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7060:HG2_Ill_150bpfermikitraw_12623:HG2_Ill_250bpfermikitraw_13446:HG2_Ill_GATKHCSBGrefine_6749:HG2_Ill_GATKHC_16066:HG2_Ill_Krunchall_13768:HG2_Ill_SVrefine2DISCOVARplusDovetail_13271:HG2_Ill_SpiralSDKrefine_17444:HG2_Ill_manta_2838:HG2_Ill_svaba_12450:HG2_PB_SVrefine2Falcon1plusDovetail_12098:HG2_PB_SVrefine2Falcon2Bionano_4639:HG2_PB_SVrefine2PB10Xhap12_7189:HG2_PB_SVrefine2PBcRplusDovetail_11308:HG3_Ill_150bpfermikitraw_12654:HG3_Ill_250bpfermikitraw_13052:HG3_Ill_GATKHCSBGrefine_6652:HG3_Ill_GATKHC_16003:HG3_Ill_Krunchall_13441:HG3_Ill_SVrefine2DISCOVARDovetail_7384:HG3_Ill_Spiral_10497:HG3_Ill_manta_2316:HG3_Ill_svaba_12575:HG3_PB_SVrefine2Falcon1Dovetail_6046:HG3_PB_SVrefine2PBcRDovetail_4526:HG4_Ill_150bpfermikitraw_12781:HG4_Ill_250bpfermikitraw_13330:HG4_Ill_GATKHCSBGrefine_6879:HG4_Ill_GATKHC_16072:HG4_Ill_Krunchall_13998:HG4_Ill_SVrefine2DISCOVARDovetail_7148:HG4_Ill_manta_2422:HG4_Ill_svaba_12531:HG4_PB_SVrefine2PBcRDovetail_4953;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0704225;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.206897;PBcalls=13;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=70;DistBack=47118;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=8:141960143-141960181;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5515.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:./.:0:6:1:3:./.:0:0:0:0:1/1:0:65:./.:.:.:.:.:.
chr8	142256583	HG2_Ill_SVrefine2DISCOVARplusDovetail_13272	A	ATCAAGATGTGCAGGCCAAGGCAGCAACAGAGAGGGTCTCCCAGCAAGGTGGAGTCACACGTTTGCGTCAGGCGACATCCCCTCGATGCTGCCATATTCTATTGGTTAACAGGAATTAC	20	PASS	ClusterIDs=HG4_PB_HySA_14379:HG3_PB_HySA_14820:HG2_PB_pbsv_9880:HG3_PB_pbsv_9614:HG2_PB_HySA_17819:HG2_Ill_GATKHCSBGrefine_6751:HG4_PB_SVrefine2Falcon1Dovetail_6072:HG4_Ill_SVrefine2DISCOVARDovetail_7151:HG4_Ill_MetaSV_5469:HG2_Ill_SVrefine2DISCOVARplusDovetail_13272:HG2_10X_SVrefine210Xhap12_7062;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7062:HG2_Ill_SVrefine2DISCOVARplusDovetail_13272:HG4_Ill_MetaSV_5469:HG4_Ill_SVrefine2DISCOVARDovetail_7151:HG4_PB_SVrefine2Falcon1Dovetail_6072;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0847458;ClusterMaxSizeDiff=0.0847458;ClusterMaxEditDist=0.163265;PBcalls=6;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=118;DistBack=-118;DistForward=-1;DistMin=-118;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=123;REFWIDENED=8:142256584-142256706;PctSeqSimilarity=0.9967;PctSizeSimilarity=1;PctRecOverlap=0.7143;SizeDiff=0;StartDistance=-34;EndDistance=-34;GTMatch=0;TruScore=90;MatchId=5516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:28:1|0:4:26:21:0:./.:0:0:0:0:0/1:18:19:./.:.:.:.:.:.
chr8	142358093	HG2_Ill_GATKHCSBGrefine_6753	C	CACACACACAGACTCACGTACACACACAGACTCACATACACACACACACATCCACATACTCACATACACACACATACAGACTCACAT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_6753:HG4_PB_pbsv_9900:HG2_PB_HySA_17823:HG3_PB_HySA_14821:HG2_PB_pbsv_9883:HG2_Ill_breakscan11_4026:HG3_PB_pbsv_9616:HG3_Ill_GATKHCSBGrefine_6653:HG2_PB_assemblyticsfalcon_27207;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6753;NumExactMatchSVs=1;ClusterMaxShiftDist=0.116279;ClusterMaxSizeDiff=0.0930233;ClusterMaxEditDist=0.325843;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=-275;DistForward=9;DistMin=-275;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=16;REFWIDENED=8:142358092-142358110;PctSeqSimilarity=0.9884;PctSizeSimilarity=0.9767;PctRecOverlap=0.977;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=98;MatchId=5517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:3:28:0:14:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr8	142405667	HG2_Ill_svaba_12456	T	TTAGGTGCGTGGGCCACCCCTCCCTCCTGCAGCCCCCGTTCATCTACCCGGGG	20	PASS	ClusterIDs=HG2_Ill_svaba_12456:HG2_PB_pbsv_9884:HG2_PB_HySA_17824:HG2_PB_assemblyticsPBcR_26466:HG3_Ill_svaba_12580;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_svaba_12456:HG3_Ill_svaba_12580;NumExactMatchSVs=2;ClusterMaxShiftDist=0.242424;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.30303;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=19318;DistForward=20118;DistMin=19318;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=204;REFWIDENED=8:142405668-142405871;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5518.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:0|1:26:0:1:33:./.:0:0:0:0:0/1:9:3:./.:.:.:.:.:.
chr8	142439575	HG2_PB_SVrefine2PB10Xhap12_7193	C	CAAGGACCAGGTGGCGGGGCAGGGTGAGCACATAGCCCAGGTCCCTGCTGTAAGGACCAGGTGGCGGGAGCAGGGTGAGTGTACAGCCCAGGTTTCTGCTGTAAGGACCCGGTGGCGGGGACAGGGTAAGCGCACAGCCCACGTCCCCGCTGTAAGGACCAGGTGGCAGGGACAGGGTGAGCACACAGTCCAGGTCCCCGCTGTAAGGACCAGGTGGCGGGGACAGGGTGAGCGCACAGTCCAGGTCCCCGCTGTAAGGACCAGGTGGCGGGGACAGGGTGAGCGCACAGTCCGGGTCCCCGCTGTAAGGACCAGGTGGCGGGGCAGGGTGAGCGCACAGTCCGGGTCCCCGCTGTAAGGACCAGGTGGCGGGGCAGGGTGAGCGCACAGTCCGGGTCCCCGCTGTAAGGACCAGGTGGCGGGGGCAGGGTGAGCGCACAGTCCGGGTCCCCGCTGTAAGGACCAGGTGGCGGGGGCAGGGTGAGCGCACAGTCCGGGTCCCCGCTGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7193:HG4_PB_pbsv_9902:HG4_PB_SVrefine2PBcRDovetail_4958:HG4_PB_SVrefine2Falcon1Dovetail_6076:HG2_PB_SVrefine2Falcon1plusDovetail_12102:HG3_PB_SVrefine2Falcon1Dovetail_6051;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7193;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0273705;ClusterMaxSizeDiff=0.0215054;ClusterMaxEditDist=0.164223;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=507;DistBack=13778;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=957;REFWIDENED=8:142439576-142440532;PctSeqSimilarity=0.9822;PctSizeSimilarity=0.9922;PctRecOverlap=0.6223;SizeDiff=-4;StartDistance=-191;EndDistance=-191;GTMatch=0;TruScore=86;MatchId=5519.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:39:0|1:29:1:0:36:./.:0:0:0:0:./.:1:10:0/1:1:8:.:.:.
chr8	142502334	HG2_PB_SVrefine2Falcon2Bionano_4643	G	CTCTGTGTCCCAGGAGGTGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCGTCTGTGTCCCAGGGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCGTCTGTGTCCCAGGGGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGGGGCGGGTAGGACCCACAGAAGTGTCCGTCTGTGTCCCAGGGGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCCACTGTGTCCCAGGCGGTGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGTGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGTGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGTGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGAGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGGGGCGGGTAGGACCCACAGAAGTGTCCGTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGCGGGTAGGACCCACAGAAGTGTCCGTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGCGGGTAGGACCCACAGAAGTGTCCGTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGCGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGGGGCGGGTAGGACCCACAGAAGTGTCCGTCTGTGTCCCAGGCGGTGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGAGGCGGGTAGGACCCACAGAAGTGTCCCTCTGTGTCCCAGGGGGCGGGTAGGACCCACAGAAGTGTCCGTCTGTGTCCCAGGCAGCGGGTAGGACCCACAGAAGTGTCCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6053:HG2_PB_pbsv_9887:HG3_PB_pbsv_9619:HG2_PB_SVrefine2PBcRplusDovetail_11312:HG2_PB_SVrefine2PB10Xhap12_7196:HG4_PB_pbsv_9905:HG2_PB_SVrefine2Falcon2Bionano_4643:HG2_PB_SVrefine2Falcon1plusDovetail_12104:HG2_PB_SVrefine2PB10Xhap12_7195:HG3_PB_SVrefine2PBcRDovetail_4531;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4643;NumExactMatchSVs=1;ClusterMaxShiftDist=0.16548;ClusterMaxSizeDiff=0.164802;ClusterMaxEditDist=0.282698;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1352;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=982;REFWIDENED=8:142502335-142503316;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.9993;PctRecOverlap=0.7576;SizeDiff=-1;StartDistance=-328;EndDistance=-328;GTMatch=1;TruScore=91;MatchId=5520.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:119:1/1:2:14:0:45:./.:0:0:0:0:0/1:5:13:0/1:8:35:.:1425:.
chr8	142525261	HG2_PB_SVrefine2PBcRplusDovetail_11313	G	GCCAGCCATCCATTCACTCACCCATCTATCCACCCATCCACCCACCCATTCACCCACCCACCCATCCATCCATCCACCCAACCATCCATGCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACACTTCCACCCACCCACCCACCCAACCATCCATCCATCCATCCACCCACACTTCCACCCACCCACTCATTCACTCCCCCACCCATCCACCCACCCACACATTCATCCATACATCCATCCACCCACACACCTCTCTACCCACCCATCCATCCACCCAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12105:HG2_PB_pbsv_9890:HG4_PB_pbsv_9908:HG2_PB_HySA_17833:HG2_PB_PB10Xdip_29587:HG4_PB_SVrefine2PBcRDovetail_4961:HG4_PB_SVrefine2Falcon1Dovetail_6079:HG3_PB_SVrefine2PBcRDovetail_4532:HG2_PB_SVrefine2PBcRplusDovetail_11313:HG2_PB_SVrefine2PB10Xhap12_7197:HG2_PB_SVrefine2Falcon2Bionano_4645:HG2_Ill_SVrefine2DISCOVARplusDovetail_13276:HG2_10X_SVrefine210Xhap12_7067:HG3_PB_SVrefine2Falcon1Dovetail_6054:HG3_PB_pbsv_9621;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7067:HG2_Ill_SVrefine2DISCOVARplusDovetail_13276:HG2_PB_SVrefine2Falcon2Bionano_4645:HG2_PB_SVrefine2PB10Xhap12_7197:HG2_PB_SVrefine2PBcRplusDovetail_11313:HG3_PB_SVrefine2PBcRDovetail_4532:HG4_PB_SVrefine2Falcon1Dovetail_6079;NumExactMatchSVs=7;ClusterMaxShiftDist=0.209591;ClusterMaxSizeDiff=0.209591;ClusterMaxEditDist=0.309059;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=292;DistBack=15116;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=183;REFWIDENED=8:142525262-142525444;PctSeqSimilarity=0.9669;PctSizeSimilarity=0.9966;PctRecOverlap=0.5563;SizeDiff=-1;StartDistance=-130;EndDistance=-130;GTMatch=0;TruScore=83;MatchId=5521.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:0:14:0:28:./.:0:0:0:0:1/1:0:8:./.:.:.:.:.:.
chr8	142527368	HG4_Ill_GATKHC_16084	G	GCCATCCCCAGACAGCTGCCTGGTCTGGCTCCTGTGTCCACCTGACTACATTCTTTCCTGGACTGTGTGC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7068:HG2_PB_pbsv_9891:HG2_PB_HySA_17834:HG4_PB_pbsv_9909:HG4_PB_HySA_14391:HG2_PB_SVrefine2PBcRplusDovetail_11314:HG4_Ill_svaba_12539:HG4_Ill_Krunchall_14005:HG4_Ill_GATKHC_16084:HG4_Ill_GATKHCSBGrefine_6885:HG4_Ill_250bpfermikitraw_13337:HG2_Ill_svaba_12460:HG2_Ill_Krunchall_13773:HG2_Ill_GATKHC_16077:HG2_Ill_GATKHCSBGrefine_6756:HG2_Ill_250bpfermikitraw_13453:HG4_Ill_SVrefine2DISCOVARDovetail_7159:HG2_PB_SVrefine2Falcon2Bionano_4646:HG2_Ill_SVrefine2DISCOVARplusDovetail_13277;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13453:HG2_Ill_GATKHCSBGrefine_6756:HG2_Ill_GATKHC_16077:HG2_Ill_Krunchall_13773:HG2_Ill_svaba_12460:HG4_Ill_250bpfermikitraw_13337:HG4_Ill_GATKHCSBGrefine_6885:HG4_Ill_GATKHC_16084:HG4_Ill_Krunchall_14005:HG4_Ill_svaba_12539;NumExactMatchSVs=10;ClusterMaxShiftDist=0.114286;ClusterMaxSizeDiff=0.0857143;ClusterMaxEditDist=0.241135;PBcalls=6;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=69;DistBack=2006;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=78;REFWIDENED=8:142527363-142527440;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:26:1|0:4:19:19:5:./.:0:0:0:0:0/1:15:19:./.:.:.:.:.:.
chr8	142668241	HG2_PB_SVrefine2Falcon2Bionano_4650	C	CACCATCACCATCACCATAATCACCATCACTATCATCAGCATCATCATCACCATCATCATCACCATCACCACCACCACCACCACCATCACTATCACCATCACCACCATCATCACCATCACCACCATCACCATCACCACCACCACCACCACCACCATCACTATCACCATCACCACCATCATCACCATCACCACCATCACTATCACCACCACCATCACCATCACTGTCATCATCACCATCACCATCATCACCATCACCACCACCATCACCATCACTGTCATCATCACCATCATCACCATCATCACCATCACCACCACCACCACCATCACCATCACTGTCATTATCACCATCACCACCATCACCATCACCACCACCATCACCATCACTGTCATCATCACCATCATCACCATCACCATCACCACCACCATCACCATCACTGTCATTATCACCATCATCACCATCACCATCACCACCACCATCACCATCACTGTCATTATCACCATCATCACCATCATCACCATCACCATCACCATCACCACCACCATCACCATCACTGTCATTATCACCATCACCACCATCATCACCATCACCACCATCACCATCACTGTCATCATCACCATCATCACCATCACCATCACCACCACCATCACCATCACTGTCATTATCACCATCACCACCATCACCATCACCACCACCATCACCATCACTGTCATCATCACCATCATCACCATCACCATCACCACCACTATCACCATCACTGTCATCATCACCATCATCACCATCACCATCACCACG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6061:HG4_PB_pbsv_9916:HG2_PB_PB10Xdip_29599:HG2_Ill_breakscan11_4028:HG2_PB_pbsv_9896:HG4_PB_SVrefine2Falcon1Dovetail_6087:HG3_PB_pbsv_9627:HG2_PB_SVrefine2Falcon1plusDovetail_12110:HG2_PB_SVrefine2PBcRplusDovetail_11318:HG2_PB_SVrefine2PB10Xhap12_7203:HG2_PB_SVrefine2Falcon2Bionano_4650:HG4_PB_SVrefine2PBcRDovetail_4964:HG3_PB_SVrefine2PBcRDovetail_4537;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4650:HG2_PB_SVrefine2PB10Xhap12_7203:HG2_PB_SVrefine2PBcRplusDovetail_11318;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0904645;ClusterMaxSizeDiff=0.0697248;ClusterMaxEditDist=0.284856;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=792;DistBack=13141;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=136;REFWIDENED=8:142668242-142668377;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9975;PctRecOverlap=0.9168;SizeDiff=2;StartDistance=-65;EndDistance=-65;GTMatch=0;TruScore=96;MatchId=5523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:./.:0:2:0:4:./.:0:0:0:0:1/1:0:14:1/1:1:176:.:.:.
chr8	142940043	HG2_Ill_MetaSV_5245	A	ATCACTACTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGAT	20	PASS	ClusterIDs=HG2_PB_HySA_17858:HG3_PB_pbsv_9633:HG4_PB_assemblyticsfalcon_26646:HG2_Ill_breakscan11_4029:HG3_Ill_MetaSV_5419:HG2_PB_SVrefine2Falcon2Bionano_4654:HG4_PB_SVrefine2Falcon1Dovetail_6093:HG3_PB_SVrefine2PBcRDovetail_4540:HG2_Ill_MetaSV_5245:HG2_PB_SVrefine2Falcon1plusDovetail_12115:HG3_PB_HySA_14849;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_MetaSV_5245:HG3_PB_SVrefine2PBcRDovetail_4540;NumExactMatchSVs=2;ClusterMaxShiftDist=0.128378;ClusterMaxSizeDiff=0.128378;ClusterMaxEditDist=0.155405;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=292;DistBack=4429;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=8:142940044-142940055;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9932;PctRecOverlap=0.9932;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5524.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:21:2:2:28:./.:0:0:0:0:0/1:27:10:./.:.:.:.:2751:.
chr8	142999007	HG2_PB_SVrefine2Falcon1plusDovetail_12118	C	CGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAACAAAATTGGCCGGGCGCGGTGACTCGCGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCAGGAGGTCAGGAGATT	20	PASS	ClusterIDs=HG3_PB_HySA_14854:HG2_PB_pbsv_9908:HG4_PB_assemblyticsfalcon_26652:HG3_PB_pbsv_9639:HG2_PB_assemblyticsfalcon_27235:HG4_PB_pbsv_9928:HG2_PB_assemblyticsPBcR_26495:HG2_PB_PB10Xdip_29616:HG4_PB_SVrefine2Falcon1Dovetail_6098:HG4_Ill_GATKHCSBGrefine_6887:HG3_Ill_SVrefine2DISCOVARDovetail_7388:HG3_Ill_GATKHCSBGrefine_6658:HG2_PB_SVrefine2PBcRplusDovetail_11324:HG2_PB_SVrefine2PB10Xhap12_7212:HG2_PB_SVrefine2Falcon1plusDovetail_12118:HG2_10X_SVrefine210Xhap12_7075:HG2_PB_HySA_17865:HG4_PB_HySA_14413:HG4_PB_SVrefine2PBcRDovetail_4968:HG4_Ill_SVrefine2DISCOVARDovetail_7161:HG2_PB_SVrefine2Falcon2Bionano_4657:HG2_10X_SVrefine210Xhap12_7074:HG2_Ill_SVrefine2DISCOVARplusDovetail_13279;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7075:HG2_PB_SVrefine2Falcon1plusDovetail_12118:HG2_PB_SVrefine2PB10Xhap12_7212:HG2_PB_SVrefine2PBcRplusDovetail_11324:HG3_Ill_GATKHCSBGrefine_6658:HG3_Ill_SVrefine2DISCOVARDovetail_7388:HG4_Ill_GATKHCSBGrefine_6887:HG4_PB_SVrefine2Falcon1Dovetail_6098;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0583942;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.236559;PBcalls=16;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=135;DistBack=7788;DistForward=27906;DistMin=7788;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=168;REFWIDENED=8:142998949-142999116;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:40:1/1:5:18:0:14:./.:0:0:0:0:1/1:1:24:./.:.:.:.:.:.
chr8	143245738	HG3_PB_SVrefine2PBcRDovetail_4544	A	AGATGGATGGATGGATGAAGGATGAAGGGATGAAAGAGAGATGGAGATGGAGGATGGAGGATGGATGGGTGGATGAATTGACAGATGGATGGAGGATGGATGGGTGGATGGATTGACAGATG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29624:HG4_PB_assemblyticsfalcon_26659:HG2_PB_assemblyticsfalcon_27244:HG2_PB_assemblyticsPBcR_26503:HG2_PB_pbsv_9919:HG4_PB_pbsv_9933:HG4_PB_HySA_14420:HG2_PB_HySA_17877:HG3_PB_pbsv_9647:HG4_Ill_GATKHC_16103:HG4_Ill_GATKHCSBGrefine_6890:HG3_Ill_GATKHC_16036:HG3_Ill_GATKHCSBGrefine_6662:HG2_PB_SVrefine2Falcon2Bionano_4661:HG4_PB_SVrefine2PBcRDovetail_4970:HG4_PB_SVrefine2Falcon1Dovetail_6103:HG4_Ill_SVrefine2DISCOVARDovetail_7163:HG3_PB_SVrefine2PBcRDovetail_4544:HG3_PB_SVrefine2Falcon1Dovetail_6071:HG3_Ill_SVrefine2DISCOVARDovetail_7392:HG2_PB_SVrefine2PBcRplusDovetail_11328:HG2_PB_SVrefine2PB10Xhap12_7217:HG2_PB_SVrefine2Falcon1plusDovetail_12124:HG2_Ill_SVrefine2DISCOVARplusDovetail_13281:HG2_Ill_GATKHC_16096:HG2_Ill_GATKHCSBGrefine_6761:HG2_Ill_250bpfermikitraw_13469;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13469:HG2_Ill_GATKHCSBGrefine_6761:HG2_Ill_GATKHC_16096:HG2_Ill_SVrefine2DISCOVARplusDovetail_13281:HG2_PB_SVrefine2Falcon1plusDovetail_12124:HG2_PB_SVrefine2PB10Xhap12_7217:HG2_PB_SVrefine2PBcRplusDovetail_11328:HG3_Ill_SVrefine2DISCOVARDovetail_7392:HG3_PB_SVrefine2Falcon1Dovetail_6071:HG3_PB_SVrefine2PBcRDovetail_4544:HG4_Ill_SVrefine2DISCOVARDovetail_7163:HG4_PB_SVrefine2Falcon1Dovetail_6103:HG4_PB_SVrefine2PBcRDovetail_4970;NumExactMatchSVs=13;ClusterMaxShiftDist=0.097561;ClusterMaxSizeDiff=0.0813008;ClusterMaxEditDist=0.221344;PBcalls=17;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=121;DistBack=28;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=146;REFWIDENED=8:143245739-143245884;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:54:1/1:3:17:1:20:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr8	143267113	HG2_PB_HySA_17879	C	CCCACCATCATCACCACCACCACCAACATCAACATCATCACCATCATCACCATCACACACCATCACTATCACATCACCATCATCACCATCACTATCACCATCATCACCATCACATCACCATCAAATCACCATCACCATCACTATCACCATCACTATCACTATCACCATCACATCAGCATCATCACCATCACTATCACCATCACCACCACTATCACATCACTATCACTATCACATCACCATCATCACCATCACTATCACCATCATCACCATCACATCACCATCAAATCACCATCATCACCATCACTATCACCATCACTGTCACTATCACCATCACATCAGCATCATCACCATCCACTATCACCATCACCACCACTATCACATCACTATCACTATCACATCACTATCACTATCACCATCACATCAGCATCATCACCATCACTATCACCATCATCACCATCACATCACCATCAAATCACCATCATCACCATCACTATCACCATCATCACCATCACTATCACATCACTATCAATATCATCACCATCACATCACTATCACATCACTATCACTATCACCATCACATCAGCATCATCACACCATCACTATCACCATCACTATCACCATCATCACCATCACATCACCATCAAATCACCATCAATCACCATCACATCACCATCAAATCACCATCACCATCCACTATCACCATCACATCACCAATCATCACATCACTATCACCATCACCATCCCATCACCATCACTATCACCATCATCACCATCACTAGCACCATCATCACCATCACTATCACCATCACTATCACCATCACACATCACATCACCATCACTATCACCATCATCACCATCACTAGCACCATCATCACCACCATCATAACCATCACATCACTATCACTATCACCATCATCACCATCACTATCACCATCACATCACCATCATCACACATCACTAGCACCATCATCACCATCACTATCACCATTACTATCACCATCATCACCATCACATCACCATCACTATCACCATCATCACCATCACTATCACCATCATCACCATCACTATCACCATCACTATCACCATCAATCACCATCACATCACCATCACTATCACCATCATCACCATCACATCACTATCACTATCACCATCATTCACCATCACTATCACCATCATCATCACCACCATCATAACCATCACGTCACTATCACTATCACCATCATCACCATCACTATCACCATCACATCCCATCATCATCACCATCACTAGCACCATCATCACCATCACTATCACCATTACTATCACCATCATCACCATCACATCACCATCACTATCACCATCACTCACCATCACATCACCATCACTATCACCATCATCACCATCACATCACTATCACTATCACCATCATCACCATCACTATCACCATCATCACCACCATCATAACCATTCACGTCACTATCACTATCACCATCATCACCATCACTATCACCATCACATCACCATCATCACCATCACTAGCACCATCATCACCATCACTATCACCATTACTATCACCATCATCACCATCACATCACCATCACTATCACCATCATCACCATTACTATCACCATCATCACCATCACTATCACCATCATTCACCATCATTATCACCATCACTATCATCAGCATCACCATCACTATCACCATCATCACCATCACTATCACCATCACTATCACCATCACTATCACCATCATCACCATCACTATCACCATCACTATCACCATCATCACCATCACTATCACCATCATCACCATCACTATCACCATCACTATCACCATCATCACCATCATTATCACCATCACAATCATCAGCATCACCATCACTATCACCATCATCACCATCATTATCACCATCACGTCACCATCATCACCATCACATCACCATCATCACCATCACTATCACCAGCACGTCACCATCATCACCATCACATCACCATCACTATCACCATCATATCACCATCACTATCACCATCACAATCACCATCATCACCATCATCACCATCACTATCACCAATCATCACCATCACTATCACCAGCACATCACCATCATCACCATCACTATCACCAGCACATCACCATCATCACCATCACATCACCATCATCACCATCACTATCACCATCATCACCACCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12125:HG2_PB_HySA_17880:HG4_PB_pbsv_9934:HG2_PB_HySA_17879:HG2_PB_pbsv_9920:HG3_PB_pbsv_9648:HG2_PB_HySA_17878:HG3_PB_HySA_14859:HG3_PB_SVrefine2Falcon1Dovetail_6072:HG3_PB_SVrefine2PBcRDovetail_4545:HG2_PB_SVrefine2PBcRplusDovetail_11329:HG4_PB_SVrefine2Falcon1Dovetail_6104:HG2_PB_SVrefine2Falcon2Bionano_4662:HG2_PB_SVrefine2PB10Xhap12_7218;NumClusterSVs=14;ExactMatchIDs=HG2_PB_HySA_17879;NumExactMatchSVs=1;ClusterMaxShiftDist=0.116795;ClusterMaxSizeDiff=0.115394;ClusterMaxEditDist=0.219648;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=2169;DistBack=6;DistForward=126;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=264;REFWIDENED=8:143267058-143267321;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9889;PctRecOverlap=0.9871;SizeDiff=24;StartDistance=16;EndDistance=16;GTMatch=1;TruScore=98;MatchId=5527.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:0:28:1:16:./.:0:0:0:0:./.:4:30:1/1:12:333:.:2250:.
chr8	143342329	HG2_PB_SVrefine2PB10Xhap12_7225	G	GGGAGGGAGGGAGGGAGGAGAGAGGGAGGGGGGTGGGGAGGGAGGAGAGAGGGAGGAGAGAGACAGGAGGGAGGAAGGGAGGAGGGAAGCAGGAGGGAAGGAGAAAAGAGGGAGGAGGAGGGAGGGTGAGGGAGGGGAGAGGGAGGGAGGGAGGAGAGAGGGAGGAGGGAGGAGGGAAGCAGGAGGGAGGGAGGAGAGGAAGAAGGAGGAGGGAGGCAGCAGAAAGGGAGGTAGGAGGAAAGGAGGAGAGAGGGAGAAGGGAGGGAGGAGACAGGGAGGGAGAGAGGGAGGGAGGAAGAAGGGAAGGAGGAGAGAGGGAAGAGGGAGGAGAGAAGGAGGAGGGAGGAAGGAAAGAGGGAGGGAGAAAGGTA	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_7166:HG2_PB_HySA_17892:HG4_PB_pbsv_9940:HG3_PB_HySA_14864:HG3_PB_pbsv_9653:HG2_PB_PB10Xdip_29638:HG2_PB_pbsv_9925:HG3_PB_SVrefine2Falcon1Dovetail_6075:HG2_Ill_MetaSV_5247:HG2_PB_SVrefine2PBcRplusDovetail_11333:HG2_PB_SVrefine2PB10Xhap12_7225:HG3_PB_SVrefine2PBcRDovetail_4546:HG4_PB_SVrefine2Falcon1Dovetail_6107:HG4_PB_SVrefine2PBcRDovetail_4971:HG2_PB_SVrefine2Falcon2Bionano_4666:HG2_PB_SVrefine2Falcon1plusDovetail_12129:HG3_Ill_SVrefine2DISCOVARDovetail_7396;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7225:HG2_PB_SVrefine2PBcRplusDovetail_11333;NumExactMatchSVs=2;ClusterMaxShiftDist=0.213469;ClusterMaxSizeDiff=0.205845;ClusterMaxEditDist=0.39206;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=370;DistBack=-1;DistForward=182;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=470;REFWIDENED=8:143342330-143342799;PctSeqSimilarity=0.9889;PctSizeSimilarity=0.9946;PctRecOverlap=0.9088;SizeDiff=-2;StartDistance=-33;EndDistance=-33;GTMatch=0;TruScore=96;MatchId=5528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:1:21:1:16:./.:0:0:0:0:./.:0:0:1/1:1:20:.:1203:.
chr8	143513559	HG2_PB_SVrefine2Falcon2Bionano_4670	A	ACCACCACCATCATCATCATCATCGCCACCTTCACCCCCAACACCACTACCATCACCACCGTCACCTTCACCATCATCCCCCGTAACCACCACCATTACCATCACCCCCAATCAATACCACTATCCCCATCACCTCCACCGCCCCCACCACCACCATCATCGTCACCATCATCATAATCACCATCATCACAACCACTACCATCACCACCACCATAAACACTACCACCACCATTATCATCACCATAACCATCACCACCACTATCACCATCATCACCTCCAGGATGACCATCATCACGACCAAAACTACCATCACCATCACCATAACCATAACCATTATCACCACCATCACTACCACCACTCCCATCACCCCCCACTCCCATTACCATCATTACAATTGCCACCATCACCACAACCACTATCACTACAACAACCACCATCACCGCCCACCACCATCACCATCATCACACTTGCCACTATCACCATCACCACCATTACTACAACCACCACCATCATCACCATTGCCATCATCACTACCATTACTATCACTACCATTTCCACCATCACTATTACCACTATCACCATCATCACCACCACCACCATTATCACCATCATCACTACCACCACCATCACCATCACCACCACCATCACCATCATTACCACCATAAGCATCATCACTACCACCACCATTATCATAATCACCACCATCACCCCACCACCACAACCATCACCATCACCATCACCACCACCTCCACCATCACCACCATTAGCATCACCACTACCACTACCATCACTATAATCACCACCATCACCACCACCACCATCACCATCATTAACACCACCACCATTATCATTACCATCATCACTACCATTACTATTATCACCATTTCCACCATCACTATTACCACTATCACCATCATCACCACAATTATCATCATCATCACTACCACCACCATCACCCCCCATTCCCATCACCACCATCACCCCTACTCCCATCACCATCATCACAATTGCCACCATCACCACAACCACCATCACTCTGACAATCACCATCACCCCCACCACCATCACCATCATCACAATTGCCACTATCACCATCACCATTACTACAACCACCACCACCACCATCTCCATCACCATCATCACTACCATTACTATCATCACCATTTACACCATCTCTATTACCATCATCACCACCACCACCATTATTACCATCACCACTACCACCATTACCATCACCACCACCATCATCACCACCATCAGCATTATCACTACAACCACCACCATTATCATAATCACCATCACCCCACCACCACAACCATCACCATCACCACCACCTCCACTGTCACCACTATTAGCATCACCACTACCACTACCATCACTATAATCACCACCATCACCACCACACCACCACTATCACCATCATTAACACCACCACCATCACCATCATCATTGCCATCACCATCACTATCACCACCCCATCACCATCATCACCATCACTATCACCATTATCACCACCACCACCACCATCACCATCATCACCACCACCAACACTAACACTGTAATCACTAACATCACCATCACCACCATCACTCCCACCACCACTATAACCATCACCACCATCCCTACCATCACCCTACCACCACCATCACAACCACCACCATTACTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6110:HG2_PB_pbsv_9934:HG3_PB_pbsv_9659:HG4_PB_pbsv_9952:HG2_PB_HySA_17894:HG4_PB_HySA_14433:HG2_PB_PB10Xdip_29643:HG2_PB_assemblyticsPBcR_26518:HG3_PB_assemblyticsfalcon_27162:HG4_PB_assemblyticsfalcon_26675:HG2_PB_SVrefine2Falcon1plusDovetail_12133:HG4_Ill_SVrefine2DISCOVARDovetail_7169:HG3_PB_SVrefine2PBcRDovetail_4548:HG3_Ill_SVrefine2DISCOVARDovetail_7399:HG4_PB_SVrefine2PBcRDovetail_4973:HG2_PB_SVrefine2PBcRplusDovetail_11338:HG2_PB_SVrefine2PB10Xhap12_7232:HG2_PB_SVrefine2Falcon2Bionano_4670:HG2_Ill_SVrefine2DISCOVARplusDovetail_13288:HG3_PB_SVrefine2Falcon1Dovetail_6078;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4670:HG2_PB_SVrefine2PB10Xhap12_7232:HG2_PB_SVrefine2PBcRplusDovetail_11338:HG4_PB_SVrefine2PBcRDovetail_4973;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0676242;ClusterMaxSizeDiff=0.0676242;ClusterMaxEditDist=0.14092;PBcalls=17;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=1665;DistBack=2568;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=8:143513560-143513584;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9988;PctRecOverlap=0.985;SizeDiff=2;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=99;MatchId=5529.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:62:1/1:1:32:1:30:./.:0:0:0:0:1/1:0:23:1/1:5:252:.:1831:.
chr8	143670738	HG2_PB_SVrefine2Falcon2Bionano_4673	T	TTGTGTCTGTGTCAGGGTCTCTGGAGTGTGTGTGTGTCAGGGTCTCTGGAGTGTGTGCGTGTTTGTGTGTGTGTCAGGCTCTCTGGAGTGTGTGTGTGTGTATCAGGGTCTCTGGAGTGTGTGTGTGTGTGTCAGGCTCTCTGGAGTGTGTGTGTATCAGGGTCTCTGGAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6113:HG2_PB_pbsv_9938:HG2_PB_PB10Xdip_29648:HG3_PB_pbsv_9663:HG4_PB_pbsv_9956:HG3_PB_HySA_14874:HG2_PB_HySA_17906:HG2_PB_SVrefine2PBcRplusDovetail_11341:HG2_PB_SVrefine2PB10Xhap12_7235:HG2_PB_SVrefine2Falcon2Bionano_4673:HG2_PB_SVrefine2Falcon1plusDovetail_12136:HG4_PB_SVrefine2PBcRDovetail_4976;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12136:HG2_PB_SVrefine2Falcon2Bionano_4673:HG2_PB_SVrefine2PB10Xhap12_7235:HG2_PB_SVrefine2PBcRplusDovetail_11341;NumExactMatchSVs=4;ClusterMaxShiftDist=0.22561;ClusterMaxSizeDiff=0.219512;ClusterMaxEditDist=0.262997;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=170;DistBack=-195;DistForward=-1;DistMin=-195;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=443;REFWIDENED=8:143670739-143671181;PctSeqSimilarity=0.9956;PctSizeSimilarity=1;PctRecOverlap=0.6667;SizeDiff=0;StartDistance=-57;EndDistance=-57;GTMatch=0;TruScore=88;MatchId=5530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:0|1:16:3:3:21:./.:0:0:0:0:./.:1:0:./.:.:.:.:.:.
chr8	144066578	HG4_PB_pbsv_9969	A	ACAAGGGTGAGGGGAGGGGAGGGGAGGAGGGGAGGCAGATGGGGGAGGGGGGTAGTGGAGGGGAGGGGAGGGGAGGCAGATGGGGGAGGGGGAGGGCGAGGGGGAGGGGGAGGGGAGGGGAGGGGGAGGCAGATGGGGAGGGAAGGAGGGGGGCAGGGGGAGGGGAGGGGAGGGGAGGGGACGGGGAGGGGGAGGGAGGGGAGGGCGAGGGGAGG	10	PASS	ClusterIDs=HG2_PB_HySA_17915:HG2_PB_SVrefine2Falcon1plusDovetail_12141:HG2_PB_SVrefine2PB10Xhap12_7241:HG3_PB_pbsv_9671:HG3_PB_HySA_14886:HG2_PB_SVrefine2Falcon2Bionano_4678:HG2_PB_SVrefine2PBcRplusDovetail_11346:HG4_PB_SVrefine2PBcRDovetail_4981:HG4_PB_SVrefine2Falcon1Dovetail_6118:HG3_PB_SVrefine2PBcRDovetail_4554:HG2_PB_PB10Xdip_29655:HG4_PB_pbsv_9969:HG3_PB_SVrefine2Falcon1Dovetail_6084:HG4_PB_SVrefine2Falcon1Dovetail_6117;NumClusterSVs=14;ExactMatchIDs=HG4_PB_pbsv_9969;NumExactMatchSVs=1;ClusterMaxShiftDist=0.236453;ClusterMaxSizeDiff=0.236453;ClusterMaxEditDist=0.266667;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=214;DistBack=8100;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=8:144066579-144066588;PctSeqSimilarity=0.9039;PctSizeSimilarity=0.9772;PctRecOverlap=0.9817;SizeDiff=-5;StartDistance=-1;EndDistance=-1;GTMatch=1;TruScore=95;MatchId=5532.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:0:28:1:27:./.:0:0:0:0:./.:1:1:./.:.:.:.:.:.
chr8	144119810	HG2_PB_SVrefine2Falcon1plusDovetail_12143	G	GAGAGAGAGAGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGAGAGAGGGAGGGAGGGAGACAGAGAGAGGGAGGGAGGGAGACAGAGAGAGAGAGAGGGAGAGAGAGGGAGAGAGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGAGAGAGAGGGAGGGAGGGAGAGAGAGAGGGAGGGAGGAAGAGAGGGAGGAGGGAGGA	10	PASS	ClusterIDs=HG4_PB_pbsv_9971:HG4_PB_SVrefine2Falcon1Dovetail_6122:HG2_PB_SVrefine2Falcon2Bionano_4679:HG2_PB_SVrefine2Falcon1plusDovetail_12143:HG2_PB_SVrefine2PBcRplusDovetail_11348:HG2_PB_SVrefine2PB10Xhap12_7243:HG4_PB_SVrefine2PBcRDovetail_4982:HG3_PB_SVrefine2Falcon1Dovetail_6085:HG2_PB_pbsv_9949;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12143:HG2_PB_SVrefine2Falcon2Bionano_4679;NumExactMatchSVs=2;ClusterMaxShiftDist=0.118812;ClusterMaxSizeDiff=0.118812;ClusterMaxEditDist=0.195373;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=213;DistBack=973;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=207;REFWIDENED=8:144119811-144120017;PctSeqSimilarity=0.9475;PctSizeSimilarity=0.9953;PctRecOverlap=0.4419;SizeDiff=-1;StartDistance=-119;EndDistance=-119;GTMatch=0;TruScore=79;MatchId=5533.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:1:31:1:9:./.:0:0:0:0:./.:1:0:./.:.:.:.:.:.
chr8	144122077	HG4_Ill_scalpel_9262	T	TGCCCTGACCCCAGGCTGAGACGGCCGCCCACCCAGGCTGTTCTGAATCTA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29660:HG4_Ill_svaba_12583:HG4_PB_pbsv_9972:HG4_Ill_scalpel_9262:HG4_Ill_Krunchall_14033:HG4_Ill_GATKHC_16131:HG4_Ill_GATKHCSBGrefine_6907:HG4_Ill_FB_8707:HG4_Ill_250bpfermikitraw_13371:HG4_Ill_150bpfermikitraw_12821:HG4_CG_vcfBeta_6412:HG3_Ill_svaba_12632:HG3_Ill_Spiral_10533:HG3_Ill_Krunchall_13479:HG3_Ill_GATKHC_16063:HG3_Ill_250bpfermikitraw_13098:HG3_Ill_150bpfermikitraw_12696:HG3_CG_vcfBeta_5434:HG2_Ill_svaba_12499:HG2_Ill_SpiralSDKrefine_17477:HG2_Ill_Krunchall_13797:HG2_Ill_GATKHC_16124:HG2_Ill_GATKHCSBGrefine_6775:HG2_Ill_FB_8739:HG2_Ill_250bpfermikitraw_13491:HG2_Ill_150bpfermikitraw_12666:HG2_Ill_breakscan11_4033;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12666:HG2_Ill_250bpfermikitraw_13491:HG2_Ill_FB_8739:HG2_Ill_GATKHCSBGrefine_6775:HG2_Ill_GATKHC_16124:HG2_Ill_Krunchall_13797:HG2_Ill_SpiralSDKrefine_17477:HG2_Ill_svaba_12499:HG3_CG_vcfBeta_5434:HG3_Ill_150bpfermikitraw_12696:HG3_Ill_250bpfermikitraw_13098:HG3_Ill_GATKHC_16063:HG3_Ill_Krunchall_13479:HG3_Ill_Spiral_10533:HG3_Ill_svaba_12632:HG4_CG_vcfBeta_6412:HG4_Ill_150bpfermikitraw_12821:HG4_Ill_250bpfermikitraw_13371:HG4_Ill_FB_8707:HG4_Ill_GATKHCSBGrefine_6907:HG4_Ill_GATKHC_16131:HG4_Ill_Krunchall_14033:HG4_Ill_scalpel_9262:HG4_Ill_svaba_12583;NumExactMatchSVs=24;ClusterMaxShiftDist=0.114286;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.209524;PBcalls=2;Illcalls=23;TenXcalls=0;CGcalls=2;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=2;HG2count=10;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=50;DistBack=16;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=8;REFWIDENED=8:144122076-144122086;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5534.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:1/1:3:33:1:5:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr8	144263397	HG2_10X_SVrefine210Xhap12_7118	C	CTCTCTCTCTCTGTGTCTCTCTGTCTCTCTGTGTATGTGTCTCTCTTTGTGTGTGTCTCTGTGTGTGTGTATGTCTGTGTGTGTGTCTCTCTTTGTGTGTGTCTGTGTGTTTGTGTGTCTCTGTGTCTCCATGTGTGTCTGTGTCTGTGTGTGTCTCTCTCTGTGTGTGTATGTCTCTGTGTGTCTCTGTCTCTGTGTGTCTCTGTGTGTCTCTGTGTGTGTCTCTCTCTCTGTGTCTCTCTCTGTGTGTGTCTCTCTGTCTCTGTGTGTGTCTCTGTTTCTCTCTCTGTATTTCTCTGTGTCTGTGTGTCTCTCGCTGTGTCTCTGTGTGTCTCTCTGTGTGTGTCTGTGTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13299:HG3_PB_SVrefine2Falcon1Dovetail_6090:HG4_PB_assemblyticsfalcon_26707:HG4_PB_SVrefine2Falcon1Dovetail_6127:HG4_PB_pbsv_9979:HG3_PB_pbsv_9684:HG2_PB_PB10Xdip_29665:HG4_Ill_GATKHCSBGrefine_6910:HG3_Ill_MetaSV_5430:HG3_Ill_GATKHCSBGrefine_6679:HG2_Ill_MetaSV_5251:HG2_Ill_GATKHCSBGrefine_6781:HG4_PB_HySA_14456:HG2_PB_SVrefine2PBcRplusDovetail_11353:HG2_PB_SVrefine2PB10Xhap12_7249:HG2_PB_SVrefine2Falcon2Bionano_4684:HG2_10X_SVrefine210Xhap12_7118:HG2_PB_SVrefine2Falcon1plusDovetail_12147:HG3_PB_SVrefine2Falcon1Dovetail_6089:HG3_PB_SVrefine2PBcRDovetail_4555:HG4_PB_SVrefine2Falcon1Dovetail_6126:HG4_Ill_SVrefine2DISCOVARDovetail_7179:HG3_Ill_SVrefine2DISCOVARDovetail_7409:HG4_PB_SVrefine2PBcRDovetail_4985:HG2_PB_pbsv_9957;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7118:HG2_PB_SVrefine2Falcon2Bionano_4684:HG2_PB_SVrefine2PB10Xhap12_7249:HG2_PB_SVrefine2PBcRplusDovetail_11353;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0875513;ClusterMaxSizeDiff=0.0848153;ClusterMaxEditDist=0.257104;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=352;DistBack=-205;DistForward=-1;DistMin=-205;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=207;REFWIDENED=8:144263398-144263604;PctSeqSimilarity=0.957;PctSizeSimilarity=0.9888;PctRecOverlap=0.5238;SizeDiff=-4;StartDistance=-168;EndDistance=-168;GTMatch=0;TruScore=82;MatchId=5535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:1:26:1:25:./.:0:0:0:0:1/1:0:26:1/1:4:69:.:.:.
chr8	144310546	HG2_PB_pbsv_9962	C	CGGGTGAGAGGCTCGAGTGGGGGAGAGGGAGGTGGGGGGAGGGAGATGGGGGGGGAGAGGGAGGTG	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_26548:HG3_PB_HySA_14903:HG4_PB_assemblyticsfalcon_26713:HG2_PB_PB10Xdip_29686:HG3_PB_assemblyticsfalcon_27198:HG2_PB_pbsv_9962:HG3_PB_pbsv_9690;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_9962;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0757576;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.255639;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=65;DistBack=8366;DistForward=30;DistMin=30;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=8:144310547-144310582;PctSeqSimilarity=0.8889;PctSizeSimilarity=0.9559;PctRecOverlap=0.942;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=5537.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:60:1/1:2:15:3:22:./.:0:0:0:0:0/1:6:3:./.:.:.:.:3861:.
chr8	144325528	HG2_PB_pbsv_9963	A	ATAATGGGGGGAAGGAGGAGGAGGCGAAAGGGGAGGAGGAAGAGAAGAGGAGGAGGGAAGAGGAGGAGGGGAAGGGGAGGGGAAGGAGGGGGAGGGGAGGGGAGAAGGGGAAAGGAGGAGGAGGGCGAAGGGGGGAGGATGGAGGGGGAGAGGGCGGAGGGAGGGGGAGGGAAAGGGTGAAGGTGGGTTGATGATATAAGGGGGGAGGAGTGAGGGGAAGTGTTTGGAGGAGGAGGGGAAAGGGGAGGAGGAGGGGAAGGGGAGTGAGGAGGGGGAGGGGGGAGGGGAAGGAGGAGGGGGACAAGGAGAAGGGGGAGGAGGGAGCGGAACGGGGAGGAAGGCAGGGGGGAGGAGGAGGAGGGGAGGGGGACGAGGAGAAGGAGGAAGGAAGGGAAGGGGCGAGGAGGAGGATGGGGAGGGGAGGAGGGGAGGGGGAGGGAAGGGGGAGGGAGGGGGAGGGGAGGGGGAGGGAGGGGGAGGGGGAGGATGGGGGAGGGGAGGGGGAGGAAGGGGGAGGCGTAAGGTTCCCAGGCCCCACAGGGTCAGTGGTTTCTCCCTGTGCGGAGACAAGAGAGCATAGAATAAAAGACACAAGACAAAGAGATAAAAGAATAAATCAGCTGGGGCCTGGGGGACCACTACACAAGACCCGGAACAGGTAGTGGCCCGAATGCCAGGCTGCACTGAGAGAGAGAGCAAAGACACACGCGCCACACAGGAGAGTGAGCCATCTCCAATGATAGGTAAGGAGGAGTGTTCCACTGGAACGCAGGGGGCCCTTCCCCTTGCCTGGCAGCCGAGGCAGAGAGAGAGAGGAGAGTAGAGAGAGAGAGAGAGACAGCTTATGCATATTTTTGCTTATTAGAGACTTTTAATAACTTTCACTAATTGACTACTGCTATCTAGAAGGCAGAGCCAGGGTGTACAGGATGGAACATTGAAAGCAGACGAGGAGGCATGACCACTGAAGCATCAGCATCAGCAGGGAGAATGGTTAGGCCTCCAGATAATTGGCGGGCGAGCCTGACTATATGTCAGGCCCTCCACAAGAGGTAGGAGTAAGAATCTGCTCTAAACTGCCTGGGGAAGGGAGACTTCCTTTCACGCGGATCTGTTCTAAGTAGCGGGTGTTCTTCCTTGACACTTACGCTACCGCTAACCACAGTCGCCGGCAGAAACGGGCATCTTTCCAGATGCTGGCGTTACTCCGTAGACCAAGGAGCCCCTGGTGCCCTGTCCAGGCATAACAGTAAGGTCGCACTCTTGGTCTCTGGTCACTCCTGTCACTATGTCCCTCAGCTCCTATCTCTGTAATGGCTTGGGTTTTCCTAGGCTATGATTATGAGAGTGAGGATTAACTATAATATTGGAATAAAGAGTAATTGCTACCCAACCTGATGATTTAATGATATTGCATATATAATCAATATCTAAGATTATATCTGGTATAACTATTCTTGTCTTGTATATTATACACTGGAACAGCTCGTGTCCTCGTTCTCTTGCTTGGCACTGGTTGGCTTGCCGCGCCACAGGGAGGAGGGAGGGAGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6133:HG2_PB_assemblyticsPBcR_26551:HG4_PB_SVrefine2PBcRDovetail_4987:HG3_PB_HySA_14905:HG2_PB_PB10Xdip_29687:HG3_PB_pbsv_9691:HG2_PB_SVrefine2PBcRplusDovetail_11357:HG2_PB_SVrefine2PB10Xhap12_7254:HG4_PB_HySA_14460:HG2_PB_pbsv_9963:HG2_PB_SVrefine2Falcon2Bionano_4688:HG4_PB_pbsv_9987:HG3_PB_SVrefine2PBcRDovetail_4559:HG3_PB_assemblyticsfalcon_27203:HG4_PB_assemblyticsfalcon_26718:HG2_PB_SVrefine2PB10Xhap12_7253:HG2_PB_SVrefine2Falcon1plusDovetail_12151:HG3_PB_SVrefine2Falcon1Dovetail_6096;NumClusterSVs=18;ExactMatchIDs=HG2_PB_pbsv_9963;NumExactMatchSVs=1;ClusterMaxShiftDist=0.185112;ClusterMaxSizeDiff=0.185112;ClusterMaxEditDist=0.254882;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=1550;DistBack=-64;DistForward=13;DistMin=-64;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=8:144325529-144325528;PctSeqSimilarity=0.9422;PctSizeSimilarity=0.9968;PctRecOverlap=0.991;SizeDiff=-5;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=97;MatchId=5538.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:35:./.:0:0:0:0:./.:0:0:0:0:./.:4:3:0/1:12:65:.:3861:.
chr8	144940217	HG3_PB_SVrefine2Falcon1Dovetail_6108	T	TGCAGAAGCTGCAGGTACGTGAGGTTCTCGTGCGTGTTGGGGTCGAAGAAGCCCTTGGTGTCGTCGCTGGGGTCGGCCAGGACGCGGTTCATCTCCTCGTCGAAGTAGCCGCGCCGGTAGGCCACGTCCACGGGCACGCGGTGGCTGTGCACGGGGTCGATGACGCCGCCCGTGGCGATCTGGGCCTCCAGCAGGCGGATGCCGTGCTCCCGGACGATGAGGTCCTTCTGCATGGCCTGGAAGAGGGAGATCTGCTGCCCGGTGTAGGGGTCGGTGTAGCCGGTGACGGCGCGCTCGGCCGACAGCAGCTTCTCCTGGATCTCGCCGCCCACCACGCCCGCGGCCACGGCCTCCTCCACCGACAGCCTCAGGTTGCGCACGGGTCGATGACGAAGCCGGTGGCCGCCTGCGCCTCCAGCAGCACCAGGGCCGTGCCGGGCCGCAGCACGCCCTTCCACATGGCCTGGTAGATGCTCATCTTCTCCTGGCGGCCGGGCTGGTCCTTGGCGGGCACCAGGACGCCCGCGATGCAGCTGGTGCCCTCCAGGTAGCGCTTGACCGAGTCCATCTCCGTCACCTCCTGCAGCGTCTTAGTGCCCTGGGCCAGGTCCCGCAGGGTCTCGGGGCCCAGGATCCCGGACGTGTGCAGCTCGGAGGCGGACACCTGGCGCCTCAGGCCGCGGAAGGACACCTTGCTGAGCCGCTCCTCCGTCTCCTCGATGACCCGGGTGAGGACGGCGACGAGGTCGGGCAGGCCCAGGGCGCCGGCCGCGTGCTGGGCCAGGAGCTCGTCTCGGCGGGCCTCGCTCAGGTACGAGGAGAAGAGGACGTCCCACACGGAGACCGGCCGCCCCTGGAACTGCCCGCGCTGCACCTCCATGGTGGCATCACGCAGGGTCTGCTCCTGGCGGCGGGCGGGCGGCGGCGGCGGCCTCCTGGGTCTCGCCCTCCCCCTGGCCCTCTCGCTGGGAGCGCCCCGAGTCGCCGTCCCCTCGCCCGGCTGGCCCTGGCTCCCGCGGGCCGCGCCAGGCGTCCTGGAGCTGCGGCCGGGCCCCGGGGGCCTCCTCGGCCTCCTCGATGATGGCGGTCAGCCGGCGGGTCAGCGCGGGCAAGTCCAGGGTCCCCGAGCCAAACTCGGCCAGCAGCTCCTCCCGGGCGGCCCCGCTCACGTAGCCGGACGCCAGCACGTCCCACACGGGCACCGCGCGCCCCGGAGGCGGCCCACCTTGACCTCCATGGTGGCCGCACGCAGGGCCTCCCGGGGGTCTGGGCGCGGGCTCCCGGCCTCGGCCTCGGCCCGCCGGGCCTGGGCCTGGGCCTGGGCCAGCAGCGAGGTGAGGGTGGCGCCCAGCTCCTCCACGGTCAGCGTGCCCGCCCGGTATCTGCTCAGCAGGTCCTGGCGCCGGTCCTCGGACACCTCGCGGTAGAAGAGGAGCTCCCAGACGGAGACGCTCTGGCCCTGGAGGGCGCCCGAGCCTGGCGTCACGCGGGCGTCGCGCAGGGCACAGCGCAGCTCCTCGCTCAGCTGGTGCACGGCGGAGCCCCGGCCTGCCAGCTGCAGCATGTAGAGCCCGGTGTCCGGGTCGGGCACAGCGGCGCAGCAGCTGCACGTACGTGAGGTTCTCGTGCGTGTTGGGGTCGAAGAAGCCCTTGGTGTCGTCGCTGGGTCGGCCAGGACACGGTTCATCTCCTCGTCGAAGTAGCCGCGCCGGTAGGCCACGTCCACGGGCACGCGGTGGCTGTGCACGGGGTCGATGACGCCGCCCGTGGCATCTGGGCCTCCAGCAGGCGGATGCCGTGCTCCCGGACGATGAGGTCCTTCTGCATGGCCTGGAAGAGGGAGATCTGCTGCCCGGTGTAGGGGTCGGTGTAGCCGGTGACGGCGCGCTCGGCCGACAGCAGCTTCTCCTGGATCTCGCCGCCCACCACGCCCGCGGCCACGGCCTCCTCCACCGACAGCCTCAGGTTGCGCACGGGGTCGATGACGAAGCCGGTGGCCGCCTGCGCCTCCAGCAGCACCAGGGCCGTGCCGGGCCGCAGCACGCCCTTCCACATGGCCTGGTAGATGCTCATCTTCTCCTGGCGGCCGGGCTGGTCCTTGGCGGGCACCAGGACGCCCGCGATGCAGCTGGTGCCCTCCAGGTAGCGCTTGACCGAGTCCATCTCCGTCACCTCCTGCAGCGTCTTAGTGCCCTGGGCCAGGTCCCGCAGGGTCTCGGGGCCCAGGATCCCGGACGTGTGCAGCTCGGAGGCGGACACCTGGCGCCTCAGGCCGCGGAAGGACACCTTGCTGAGCCGCTCCTCCGTCTCCTCGATGACCCGGGTGAGGACGGCGACGAGGTCGGGCAGGCCCAGGGCGCCGGCCGCGTGCTGGGCCAGGAGCTCGTCTCGGCGGGCCTCGCTCAGGTACGAGGAGAAGAGGACGTCCCACACGGAGACCGGCCGCCCCTGGAACTGCCCGCGCTGCACCTCCATGGTGGCATCACGCAGGGTCTGCTCCTGGCGGCGGGCGCGGCGGCGCGGCGGCGGCCTCCTGGGTCTCGCCCTCCCCCTGGCCCTCTCGCTGGGAGCGCCCCGAGTCGCCGTCCCCTCGCCCGGCTGGCCCTGGCTCCCGCGGGCCGCGCCAGGCGTCCTGGAGCTGCGGCCGGGCCCCGGGGGCCTCCTCGGCCTCCTCGATGATGGCGGTCAGCCGGCGGGTCAGCGCGGGCAAGTCCAGGGTCCCCGAGCCAAACTCGGCCAGCAGCTCCTCCCGGGCGGCCCTGCTCACGTAGCCGGACGCCAGCACGTCCCACACGGGCACCGCGCGCCCCCGGAGGCGGCCCACCTTGACCTCCATGGTGGCCGCACGCAGGGCCTCCCGGGGGTCTGGGCGCGGGCTCCCGGCCTCGGCCTCGGGCCGGGCCTGGGCCTGGGCCTGGGCCAGCAGCGAGGTGAGGGTGGCGCCCAGCTCCTCCACGGTCAGCGTGCCCGCCCGGTATCTGCTCAGCAGGTCCTGGCGCCGGTCCTCGGACACCTCGCGGTAGAAGAGGAGCTCCCAGACGGAGACGCTCTGGCCCTGGAGGGCGCCCGAGCCTGGCGTCACGCGGGCGTCGCGCAGGGCACAGCGCAGCTCCTCGCTCAGCTGGTGCACGGCGGAGCCCCGGCCTGCCAGCTGCAGCATGTAGAGCCCGGTGTCCGGTCGGGCACGCAGCGGCGCAGCGCAGCAGCTGCACGTACGTGAGGTTCTCGTGCGTGTTGGGGTCGAAGAAGCCCTTGGTGTCGTCGCTGGGGTCGGCCAGGACACGGTTCATCTCCTCGTCGAAGTAGCCGCGCCGGTAGGCCACGTCCACGGGCACGCGGTGGCTGTGCACGGGGTCGATGACGCCGCCCGTGGCGATCTGGGCCTCCAGCAGGCGGATGCCGTGCTCCCGGACGATGAGGTCCTTCTGCATGGCCTGGAAGAGGGAGATCTGCTGCCCGGTGTAGGGGTCGGTGTAGCCGGTGACGGCGCGCTCGGCCGACAGCAGCTTCTCCTGGATCTCGCCGCCCACCACGCCCGCGGCCACGGCCTCCTCCACCGACAGCCTCAGGTTGCGCACGGGGTCGATGACGAAGCCGGTGGCCGCCTGCGCCTCCAGCAGCACCAGGGCCGTGCCGGGCCGCAGCACGCCCTTCCACATGGCCTGGTAGATGCTCATCTTCTCCTGGCGGCCGGGCTGGTCCTTGGCGGGCACCAGGACGCCCGCGATGCAGCTGGTGCCCTCCAGGTAGCGCTTGACCGAGTCCATCTCCGTCACCTCCTGCAGCGTCTTAGTGCCCTGGGCCAGGTCCCGCAGGGTCTCGGGGCCCAGGATCCCGGACGTGTGCAGCTCGGAGGCGGACACCTGGCGCCTCAGGCCGCGGAAGGACACCTTGCTGAGCCGCTCCTCCGTCTCCTCGATGACCCGGGTGAGGACGGCGACGAGGTCGGGCAGGCCCAGGGCGCCGGCCGCGTGCTGGGCCAGGAGCTCGTCTCGGCGGGCCTCGCTCAGGTACGAGGAGAAGAGGACGTCCCACACGGAGACCGGCCGCCCCTGGAACTGCCCGCGCTGCACCTCCATGGTGGCATCACGCAGGGTCTGCTCCTGGCGGCGGCGCGGCGGGGCGGCGGCGGCCTCCTGGGTCTCGCCCTCCCCCTGGCCCTCTCGCTGGGAGCGCCCCGAGTCGCCGTCCCCTCGCCCGGCTGGCCCTGGCTCCCGCGGGCCGCGCCAGGCGTCCTGGAGCTGCGGCCGGGCCCCGGGGGCCTCCTCGGCCTCCTCGATGATGGCGGTCAGCCGGCGGGTCAGCCGGGCAAGTCCAGGGTCCCCGAGCCAAACTCGGCCAGCAGCTCCTCCCGGGCGGCCCTGCTCACGTAGCCGGACGCCAGCACGTCCCACACGGGCACCGCGCGCCCCCGGAGGCGGCCCACCTTGACCTCCATGGTGGCCGCACGCAGGGCCTCCCGGGGGTCTGGGCGCGGGCTCCCGGCCTCGGCCTCGGCCCGGGCCTGGGCCTGGGCCTGGGCCAGCAGCGAGGTGAGGGTGGCGCCCAGCTCCTCCACGGTCAGCGTGCCCGCCCGGTATCTGCTCAGCAGGTCCTGGCGCCGGTCCTCGGACACCTCGCGGTAGAAGAGGAGCTCCCAGACGGAGACGCTCTGGCCCTGGAGGGCGCCCGAGCCTGGCGTCACGCGGGCGTCGCGCAGGGCACAGCGCAGCTCCTCGCTCAGCTGGTGCACGGCGGAGCCCCGGCCTGCCAGCTGCAGCATGTAGAGCCCGGTGTCCGGGTCGGGCACGCAGCGGCGCAGCAGCTGCACGTACGTGAGGTTCTCGTGCGTGTTGGGTCGAAGAAGCCCTTGGTGTCGTCGCTGGGTCGGCCAGGACACGGTTCATCTCCTCGTCGAAGTAGCCGCGCCGGTAGGCCACGTCCACGGGCACGCGGTGGCTGTGCACGGGGTCGATGACGCCGCCCGTGGCGATCTGGGCCTCCAGCAGGCGGATGCCGTGCTCCCGGACGATGAGGTCCTTCTGCATGGCCTGGAAGAGGGAGATCTGCTGCCGGTGTAGGGGTCGGTGTAGCCGGTGACGGCGCGCTCGGCCGACAGCAGCTTCTCCTGGATCTCGCCGCCCACCACGCCCGCGGCCACGGCCTCCTCCACCGACAGCCTCAGGTTGCGCACGGGGTCGATGACGAAGCCGGTGGCCGCCTGCGCCTCCAGCAGCACCAGGGCCGTGCCGGGCCGCAGCACGCCCTTCCACATGGCCTGGTAGATGCTCATCTTCTCCTGGCGGCCGGGCTGGTCCTTGGCGGGCACCAGGACGCCCGCGATGCAGCTGGTGCCCTCCAGGTAGCGCTTGACCGAGTCCATCTCCGTCACCTCCTGCAGCGTCTTAGTGCCCTGGGCCAGGTCCCGCAGGGTCTCGGGGCCAGGATCCCGGACGTGTGCAGCTCGGAGGCGGACACCTGGCGCCTCAGGCCGCGGAAGGACACCTTGCTGAGCCGCTCCTCCGTCTCCTCGATGACCCGGGTGAGGACGGCGACGAGGTCGGGCAGGCCCAGGGCGCCGGCCGCGTGCTGGGCCAGGAGCTCGTCTCGGCGGGCCTCGCTCAGGTACGAGGAGAAGAGGACGTCCCACACGGAGACCGGCCGCCCCTGGAACTGCCCGCGCTGCACCTCCATGGTGGCATCACGCAGGGTCTGCTCCTGGCGGCGGGCGGCGGCGGCGCGGCCTCCTGGGTCTCGCCCTCCCCTGGCCCTCTCGCTGGGAGCGCCCCGAGTCGCCGTCCCCTCGCCCGGCTGGCCCTGGCTCCCGCGGGCCGCGCCAGGCGTCCTGGAGCTGCGGCCGGGCCCCGGGGGCCTCCTCGGCCTCCTCGATGATGGCGGTCAGCCGGCGGGTCAGCGCGGGCAAGTCCAGGGTCCCCGAGCCAAACTCGGCCAGCAGCTCCTCCCGGGCGGCCCCGCTCACGTAGCCGGACGCCAGCACGTCCCACACGGGCACCGCGCGCCCCCGGAGGCGGCCCACCTTGACCTCCATGGTGGCCGCACGCAGGGCCTCCCGGGGTCTGGGCGCGGGCTCCCGGCCTCGGCCTCGGCCCGGGCCTGGGCCTGGGCCTGGGCCAGCAGCGAGGTGAGGGTGGCGCCCAGCTCCTCCACGGTCAGCGTGCCCGCCCGGTATCTGCTCAGCAGGTCCTGGCGCCGGTCTCGGACACCTCGCGGTAGAAGAGGAGCTCCCAGACGGAGACGCTCTGGCCCTGGAGGCGCCCGAGCCTGGCGTCACGCGGGCGTCGCGCAGGGCACAGCGCAGCTCCTCGCTCAGCTGGTGCACGGCGGAGCCCCGGCCTGCCAGCTGCAGCATGTAGAGCCCGGTGTCCGGGTCGGGCACGCAGCGGCGCAGCAGCTGCACGTACGTGAGGTTCTCGTGCGTGTTGGGGTCGAAGAAGCCCTTGGTGTCGTCGCTGGGGTCGGCCAGGACACGGTTCATCTCCTCGTCGAAGTAGCCGCGCCGGTAGGCCACGTCCACGGGCACGCGGTGGCTGTGCACGGGGTCGATGACGCCGCCCGTGGCGATCTGGGCCTCCAGCAGGCGGATGCCGTGCTCCCGGACGATGAGGTCCTTCTGCATGGCCTGGAAGAGGGAGATCTGCTGCCGGTGTAGGGGTCGGTGTAGCCGGTGACGGCGCGCTCGGCCGACAGCAGCTTCTCCTGGATCTCGCCGCCCACCACGCCCGCGGCCACGGCCTCCTCCACCGACAGCCTCAGGTTGCGCACGGGGTCGATGACGAAGCCGGTGGCCGCCTGCGCCTCCAGCAGCACCAGGGCCGTGCCGGGCCGCTTCCACATGGCCTGGTAGATGCTCATCTTCTCCTGGCGGCCGGGCTGGTCCTTGGCGGGCACCAGGACGCCCGCGATGCAGCTGGTGCCCTCCAGGTAGCGCTTGACCGAGTCCATCTCCGTCACCTCCTGCAGCGTCTTAGTGCCCTGGGCCAGGTCCCGCAGGGTCTCGGGGCCCAGGATCCCGGACGTGTGCAGCTCGGAGGCGGACACCTGGCGCCTCAGGCCGCGGAAGGACACCTTGCTGAGCCGCTCCTCGTCTCCGATGACCCGGGTGAGGACGGCGACGAGGTCGGGCAGGCCCAGGGCGCCGGCCGCGTGCTGGGCTCGTCTCGGCGGGCCTCGCTCAGGTACGAGGAGAAGAGGACGTCCACACGGAGACCGGCCGCCCCTGGAACTGCCCGCGCTGCACCTCCATGGTGGCATCACGCAGGGTCTGCTCCTGGCGGCGGCGGCGGCGCGGCGGCGGCCTCCTGGGTCTCGCCCTCCCCCTGGCCCTCTCGCTGGGAGCGCCCGAGTCGCCGTCCCCTCGCCCGGCTGGCCCTGGCTCCCGCGGGCCGCGCCAGGCGTCCTGGAGCTGCGGCCGGGCCCCGGGGGCCTCCTCGGCCTCCTCGATGATGGCGGTCAGCCGGCGGGTCAGCGCGGGCAAGTCCAGGGTCCCCGAGCCAAACTCGGCCAGCAGCTCCTCCCGGCGCCCTGCTCACGTAGCCGGACGCCAGCACGTCCCACACGGGCACCGCGCGCCCCGGAGGCGGCCCACCTTGACCTCCATGGTGGCCGCACGCAGGGCCTCCCGGGGTTCTGGGCGCGGGCTCCCGGCCTCGGCCTCGGCCCGGGCCTGGGCCTGGGCCTGGGCCAGCAGCGAGGTGAGGGTGGCGCCCAGCTCCTCCACGGTCAGCGTGCCCGCCCGGTATCTGCTCAGCAGGTCCTGGCGCCGGTCCTCGGACACCTCGCGGTAGAAGAGGAGCTCCCAGACGGAGACTCTGGCCCTGGAGGGCGCCCGAGCCTGGCGTCACGCGGGCGTCGCGCAGGGCACAGCGCAGCTCCTCGCTCAGCTGGTGCACGGCGGAGCCCCGGCCTGCCAGCTGCAGCATGTAGAGCCCGGTGTCCGGGTCGGGCACGCAGCGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7267:HG2_PB_PB10Xdip_29711:HG3_PB_SVrefine2PBcRDovetail_4570:HG4_PB_SVrefine2PBcRDovetail_4995:HG4_PB_SVrefine2Falcon1Dovetail_6143:HG3_PB_SVrefine2Falcon1Dovetail_6108:HG2_PB_SVrefine2PBcRplusDovetail_11368:HG2_PB_SVrefine2Falcon2Bionano_4699:HG2_PB_SVrefine2Falcon1plusDovetail_12162;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6108;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00689094;ClusterMaxSizeDiff=0.00689094;ClusterMaxEditDist=0.0119257;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=7953;DistBack=2631;DistForward=566;DistMin=566;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=559;REFWIDENED=8:144940218-144940776;PctSeqSimilarity=0.9948;PctSizeSimilarity=0.994;PctRecOverlap=0.9866;SizeDiff=-48;StartDistance=-83;EndDistance=-83;GTMatch=0;TruScore=99;MatchId=5541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:128:1/1:0:46:0:42:./.:0:0:0:0:./.:1:0:1/1:1:76:.:.:.
chr8	145091981	HG3_PB_SVrefine2PBcRDovetail_4573	T	TGTTAGAGGTGAGCCTGGGAGAAGGAAAGGCAGTTTTGGAGCAAGAAAATGAGTTGTATTTTGGACAAAATTATTTTAAGATGTCCACACAACATCCACGTGGAGTGTCCAGAAGCAGTAGCACTATGAGCCTGAAGCTCGGAGAAGTCAGGTCTAGAGAGAAAAGATTCAAGAGTTACTGATAATTCAAGCTGAGGTAGGGGGCGAGGCCATCTGGGAAGAGAGTGCACAGTAAGAGACTGAAGGACAGATCCTGACTGAGGACAGGTAGAGGAGTTGACAAAGGAGCATGCAGAGAGGCAAGGGAAACTTCAAAAGCAGAATGTCACAAAAGCCAAGAGACAGCTTCAAAGGGGACAGTGTCAGCAAGGTAAAGGCTGCCAAGAGGTCAAGCAAGAAAAGTACTAAAAATATCCATAGCATTCAGTGGACAATTCATGACATTGGCATTCGTGACCTTGGTTAGAGTGATTTCAACCATCATAGGTGGAATGGCCGACCAGGGTGAGGTGAAAAGTCAGTGAGAAAATGGAGAGAAAAGATGATGGAGATACTTAATTCAAGGAGTTTGGCCTTGGGGTGAGGGGAGTGGACAGGGAGAGGGCAGTAGCTGGGAGGGCATGAGGTCCAGAACTTCTTTTCAAGGTGGCAGAGACCTGAGTTTGTTTACATGTGGAAAGAAGAGGCCAGGAGAGACTGTTGGAAAATACGCAAGATAAAAGAGGTACATTATGGGGTGGGGAGTGCCCTTGACTGAAGGAAGAGAGTCTCTTCCACTATCCTAGAAGGGAAGGAGGAAGGAGAGCATGAGTGTGAATGCCAGCTGGTGGGAAGCTAAAGGAACTCCAGACCCGTGGCTTCAATTTTCTCTGTTCAAATGTTCTTCTCTGAGAGCAAGGATGGAGCGGGGAAGGTCTGAAATAGAGTAAAAATGGGGGGCTGGGCACGGTGGCTCACATCTGTAGTCCCAACACTTTGGAAGGCCGAGCCGGGCAGATGACCTGAGGTCAGGAGTTTGAGACCATCCTGGCCAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAAAAAAAAAAAGCAGGCATGGTGGCGGGCGCCTGTGGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGGGACGGGGAAGGAACTGAGAGGAGAACTTGGAGGGTCTGTCTGGATGTATAGTGGGCTGAATGGCGCAACCATCTTCGGGATTTGCAAAGGCAGCAGCCATCAATCTCCTGCCTTCTCCAGCAGCATTTGGCAGCCTGAGGGCAGGCATGGGGGAGGCAAGCAGGCAGTGCCGAGGATGGCTCAGCAAGAGCTCAGGCACATCAAAGCTGCTCTGGCTGAGAGCGCAGCCAAAACCAGGAGTGCTGTCAGATGGAGAGAAAATAAAGAGGCCAGTGGACTGAGATCTGGAGAGGCTCAGAGACCAGGTGGCCAGAGTGATCTCTGCCCAAGACAGAAGGTACAACTGTGTGGTCAGAGTGGGTAATCTGAAGAGGCAGGAAATCAGAAAATGTTGGCCGTTGGCCGAGTTAACTTCACCGGGACAGAACAGGCGCCAAGAGCTTCAGACTTGGCCCCGTGCACGGGCAGGTGGGAGCTGCGGCATGCAGACTGCGGGGCGTCCTGCTCCTGAGGGCTCAGGGGCTTGCAGGGAGATAGGGCTGTTGGAGTAGCTGGGGAGACAAGAAATGAGGGCCAAGATGGGGGCTCAAGACACTAAAACAGTAACTGCACTGAAAACTGGCTCCTGCCCCCACCGGTCAGACCTGGCTCCTCCACACAGAGCTCAGGTGACAGGTGGGACAGCCGTCAGCACGGAACAGGCAGTCAAGAAAGGAGGACTGAGGGCCTGCTCTAGCCACCAGCATCCTCCTCATCCCAGCCCTCACCACCCCTCCCTCACCCGAGCCCACACACCTACCTGAGGATCCTCTCCCCTCAGGGCCGCCTCGTCCTGCTCTCCCACTGCCTCCCCCGGGGGCTGCGGCAGGTCTCCTCCGGCAGGGGGCAGTCTTCCCTCAGTTCCGGAGGGCCTTCCCGCACGAACGCCCGCCCCCATGTCACAGTTTCCCTCACACGAGAACCTGCCTTGAATTCAGGACCTGCGAACCCCACAGATGCATCCGGCCCCTCAGGACCCGTCAATACCCCACAAGACTCTACCCCACAAGAAACACGTTCCCGCTCAAGATCTGTCCCTCCCTACTCAGGACACATCCCTCCCCTCTAAGGACCCTCCCCGCTCAGGACCCTCTTCCCTCAGGACCATCTCCCCTCAGGAGGCTGTTCTCTCAGGACACTCTTCCCTGAAGACCCTCTCCGCTGAAGAACCTCTCGCCTCAGGACCCTCTTCCCTTGGAAACTTCTCCCCTCAGGACCTTCCCTCTCAGGACTCTCTCCCTCAGAACCCTTTCCCCCGAGGACTACCTTCCCTCAGGACCCTCTTCCCTGATAACCCTCTCCCCTCAGTGCCCTCTCCCCTCAGAACGCTCTTCTCTCAGGACCACCTTCCCGCAGGACACTCTTCCCTCAGGACTCTCTTCTCTGAGGAACCCCTCACATCAGGACCCTCTCCCCTCAGAACCCTCTTCCCTCAGGACCCTCTTCCTTCAGTATCCTCTCCCCTCAGGACCTTCTCCCCTCAGAACCCTCTCCCCTCAGAACCCTCTTCCTTCAGGACCCTCCTCCCTGAGTATACTCTCCCTTCAGGACCCTCCCCGCCAGGACCCTCTCCCCTCGCACCCCTCTTCCCTCAGGATCCTCTTCCCTCAGGAGCCTCTTCCCTCAGGAGCCTCTTCCCTCAGGACCTGATGCCCTTAGGACCAAGCTCTTCCCTTAGGGCCCTCTCCCATCAAAACCCTCTCCCCTCAGAACTCTCTTCTCTCAGGACCCTCTTCCCTAAAGACCCTCTCCCCTCAAAACTCTCTTCCCTCAGACCCCTCTTCCCTCAGGACCCTCTTCCCTCAGGACCTTCTCCCCTCAGGACCCCCTCACCTTAAGTACCTCTACCCTCAGTACTTTCCCCCTCAAGACCCTCTCCCCTCAGGAACCTCTTCCCTGACAACCTCCTTCCCTGAAAACCTTCCCCCATCAGGACTCTCTTCCCTCAAGATCTTCTCCCCTGAGGACCTGCTGCCCCCAGGACCCCCTCCCCTCAGGACCCTCTTCCCTCAGGACCCCCTCCCCTCAGAACCCTCTCCCCTCAGAACCCTCTCCCCTCAGAACCCTTTCCCCTCAGAACCCTCTTCCTTCAGGACCCTCTCCCTGAGTATACTCTCCCTTCAGGACCCTCCCACCTCAGGTCTCTCTCCCCTTAAGGACCTTCTCTCCTCAGGACCTATCGTCTACCATCAGAACCCTTTTCCCTCAGGACTCTGTCCTCTCAGGACCCTCTTCCCTCGGGACCCTCTTTCTGAGGAACCTCTTCCATGAGGACCATTTCCCCTCAGGACCCTCCCACCTCAGGTCCCTCTCCCCTAAGGACCCTCTCCCCTCAGGACCTACCCTCTCCTCTCAGGACCCTCTCCCTTCAGGACCTTCCCCCTTAGGACCCTCTCCTCTCAGAACGCTCTTCCCTCACGATCACCTTCCCTCAGGACCCTCTCCCCTCAGGACCCTCTTCCTTCAGGAACCCCTTCCCTCAGGACCCTCTTCCTTCGGTATCCTCTCCCCTCAGGACCTTCCCTTTCAGGACCCTCTCCCCTCACAGCCCTCTTCCCACAGGACCATCTTCCCTCAGGACCCTCTTTTCTCAGGACCCTCTTCCCTCATAACCCTCTTCCCTCAAGACTGCTTTCTCTCAGACCTCTCTTCCCTCCAGACCCTCTCCCCTCAGGACACCCTTCCCTCAGGACCATCTCCCCTCAAAACTCTCTTCCCTCAGGACCCTCTTCCCTAAGGACCCTCTCCCCTCAGGACACCCTTCCCTCAGGACCCTCTTCCTTCAGGACCTTCTTTCCTCATAACCCTCTTCCCTCAGGACTGCCTTTTCTCAGACCCCTCTTCCCCCAGGACGCTCTCTTCTCAAAACCCTCTTCCCTCAGAACCCTTTGCCTAAGGACCCCCTTCCCTCAGGACCCTCTCCCCTCAGAACCCTCTCCCCTCCCCTCAGGACCACCTTCTCTCAGGACCCCCTTCTCTGAGGACCCTGTACCCTCAGGACTCTCTCCCCTCCAAACCGTCTCTTCATAGGACCATATCTCCTCAGGACCCTCTCCTCTTAGGACCCTCTTCCCTCAGGACCCTCTCCCCTCAGGACCCTTTCCCCTCTGGACCCTCTCCCCTCATAACCCACTTTCTCCCCTGAGGATTCTCTCCCTCAGGACCCTCTTCCTTCAGTATCCTCTCCCCTCAAGACCTTTCCCATCAGGACCCTCTCCCCTTAGAACCCCCTCCCCTCAAGACCGCCTTCCCTCAGGACCCTCTCCCCTCAGGACTCTCTTCCTTCAGGACCCCCTTCCCTCAGGTCCCTCTCCCCTCAGGACCCTCTTCCCTCAGGGCCCTCTGCCCTCAAAACTCTCTTCCCTAAGAACTTTTTTTCTAGGACCCTCTTACCTCAGAACCCTCTCCCCTCAGGACCCTCTGCCCCAAAGAACCTCATCCCCCAGTACCTTCCCCCTCAAGACCCTCTCCCCTCAGGAAGCTCTTCTCTCAGGACCCTCTTCCCTGAAAACTCTCCCCCTTCAGAAACCTCTTCCCTCAGGATCTTCTTCCCTGAGGACCCTCTTCCCTCAGGACCCTCTTTCCTGAGGAACCTCTTCCCTGAGGAGCCTCTCCCCTAAAGACCCTCCCACTTTAGGTTTCTCTCCCCTAAGGACCCTCTCCTCTCACGACCCTCTCTCCTCAGGACCGTCTTCCCTCAGGACTATCTTCCCTGAGGAACCTCTCCCCTCAGGATCCTCTCCCCTCAGGACCCTCTTCCCTCAGAACCCTTTCCCTAAGGACCCTCTTCCCTGAGGACCCTCTTCTCTGAAAACCCTCCCCCCTCAGGACCCTCTTTTCTAAGGACCTTCTTCCCTGAGGACCCTCTCTCCTCAGGACCATATCGCCTCAGTACCCTCCTCTCTCGTGACTGTCTCCCCTCGTGGCCCTCTTCTCTAAGGACACTCTCTATGCAGGACCCTTTCCCCTCACGACCTACCCTATTCCCTCAGGACACACTTCCCTGAAAACCCTCTTCCCTCAGGACCCTCTTCCCTGAGGAACTTCGTCCCTGAGGACCCTCTCCCCTCAGGACCCTCCCACCTCAGGCCCCTCTTCCCTAAGGACCCTCTCTCCACAGGACCCTCTCCCCTCATGACCCTCTCACCTCATGACCCAGTTTCTCCCCTGAGAATTCTCTCCCTCAGGACTCTCTTCCTTCAGTATCCTCTCTCCTCGGGACCTTCCCCATCAGTACCCTCCCACCTTAGAACCCTCTCCCCTCAAGACTGCCTTCTCTCAGGACCCTCTCCCCTCAGGACTGCCTTCCCTCAGGACCTCCTTCCCTCAGATCCCTCTCCCCTCAGGGCCCTCTGCCCTCAAAACTCTCTTCCCTCAGAACTTTTCTTCTAAGGACCCTCTTACCTCAGAACCCTCTCACCTCAGGACCCTCTGTCCAGAAGAACCTCACACCCCAGGACCTTCCCCCTCAAGATCCTCCCCCCTCAGGAAGCTCTTCTCTCAGGAACCTCTTCCCTGAAAACCCTTCCCCCTCAGGACCCTCTTCCCTCAGGACCCTCTTTCTTGAGGAACCTCTTCCCTGAGGAGCCTTTCCCCTCAAGACCCTCCCACTTCAGGTCTCTCTCCCCTCAGGACCTTCTCCTCTCACGACCCTCTCTCCTCAGGACTGCCTTCCCTCAGGACTATCTTCCCTGAGGAAACTCTCCCCTCAGGACCCTCTTCCCTTAGAACCCTTTCCCTAAGGGCCCTCTTCCCTGAGGACCCACTTCTCTGAAAACCCTCCCCCGTCAGGACCCTCTTTTCTAACGACCTTCTTCCCTGAGGACCCTCTCTCCTCAGGACCATATCGCCTCAGTACCCTCCTCTCTTGTGACCATCCCCCGCCATGGCCCTCTTCTCTAAGGACACTCTCTATGCAGGACCCTTTCCCCTCATGACCTACCCTATTCCCTCAGGACCCTCTTCCCTGAAAACCCTCTTCCCTCAAGACCCTCTTCCCTGAGGAACCTCGTCCCTCAGGACCCTCCCACCTCAGGTCCCTCTCCCCTAAGGACCCTCTCTCCTCAGGACCCTCTTCTCTCAGGACTCCTTTCCCTCAGGACCCTCTCCCCCCAGGACCCTCTTCCCTCAGGACCCCTTTCTCTCAGGACCCTCTTTCCTCAGGACCTACCCTCTCCCCTGAGGACCCTCTCCCCTCAGGACCTACCCTCTTCCCTCAGGACCTCTTCCCTGAGGAACTTCTCCCCTCAGGACCATCCCACCTCAGGACCCTCTCTCCTGAGGACCCTCCCCCTTAGGACCCTCTTCCCTTAGGACCCTCTTCCCTCTGGACCCTCTCCCCTCATGACCCACTCTCTCCCCTGTAGAACCTCTCCCCTTAGGACCTTCGCCCTGAGGACCCTCTCTCTTCAAGACCCTCTCCCCTCAGAAAGCTCTTCTCTCAGAACCCTCTTCCCTGAGGACCCTGTTCCCTAAAAACCTTCCCCCCTCAGGACCCTCTTCCCTCAGGACCTTCTACCTTAAGGACCCTCTCCCCTCAGGACCCTCTACCCTAAGGACCCTCTCCCCTCAGAACCCTCTCCTCTCCCCTCGGGACCACCTTCCCTCAGGACCCTCTTCTCTGAGGACCCTGTACCCTTAGGAGCCTCTCCCCTCCGGACCCTCTCTTCACAGGACCATCCTACTTCTAGACCATCTTTCCCCAGGACCCTCTCCCGTTAGGACCCTCTCCCTTCAGGACTCTCTTCCCTCAGGACCCTCTACCCTCAGGATGCTCTCCCCTCCAGGCCCTCTCCCTCATGACCTACTCACTCCCCTGAGGACCCTCTCCCTCAAGACCCTCTTCCCTCATAAACTTCCTCCCCAGGACCGCCTTCTTTCAGACCCCTCTTCTTTCAGGACCCTCTCCCCAAAGGACCCCCTTCCCTCAGGACCCCCTTCCCTCAGGACCCCCTTCCTTCAGGACCCTATTCCCTTAGGATCCTCTTCCCTCTGGATCCTCTTCCCTCAGGACCCTCTCCCCTTGAAACTCCCCTCAGGACCCCCCTTGGGATCCTCTCCCCTCAAGACCCCCTTCCCTCAGGACCCTCTCCCCTCAAAACTCTCTTCCTTCAGAACCCTTTCCCTAAGGTCCCTCTTCCCTCAGAACCCTCTCTCCTGAAGAACCTGTCCCCTCAGGACCTTCCCCTTCATGACCCTCTTCTCTCAAGACCCTCTCTCCTCAGGAAACTTTTCTCTCAGGACCCTTTTCCCTGAAGGCCCTCTTCCCTGACGACCCTCTTCCCTGAAAACCCTCCTTCCCTCAGGACCCTCTCCCCTCAAGACCTACCCTCTCCCCTCAGCACCCTCTTCCCTGAGGACCCTCTTCCCTCAGGACCCTCTTTCCTGAGGAATCTCTTCCCTGAGGAACCTTTCCTTTCAGGACCCTCCCACCTCAGGTCCCTCTCCCTAAGGACCCTCTCCCCTCAGGACCCTCTTCCTTCAAGATCCTCTTCCCTCAGGACCCTCCAGCCTCAGCAGCCTCCCCCCTCAGGACCCTTTTTCTTGAGGACCCTCTCCTCTCAGGACCATCTCACCTCAGGACCCTCTCCCCCTAGGACCATCTCCCCTCAGGACCTACCTTCTCCCCTAAGGAAACTCTTCCCTCAGGACCCTCTTCTTTGAGGATTCTTTTCCCTGAGGACCCTCTCCTCTCAGGATCATTTCACCTCAGGACCCTTTCTCCTCAGGGCCCTCTCCCCTTAGCACCCTCTCCCTTCAGGACTCTCTTCCCACAGGACCTTCTTCCCTCATACTTTCTCCCCTCACAATCCTCCCCTTGGTTTAAGTGATCCTCCCATCTTAGCCTCTCAACGTGCTGGGATTCCAGTCGTGAGGCCAGGTGTCTAGCTTTTACTTTTCTTTTTAACTTCAATTGTTTGATGTACCAAACCTTGCTGAGAGACCTAAATAATTAAATAATCATATAAACGCAGTGAATCTGAAGTCCTCTTCAATGTTCTCTTCAAGTTCTTTTCAAGGTACTTGTACTGGAGCCTAAGATTTTCAACTCACAAATCTAAATAAATTAAACACAAATTATCAAAAGGTTAAGAAATCACTTGTACATATTGCCTTGGAATATCATGCGACGGGACTGAAATCTCTTAAACACAAGCTAACAGTGGGTGTCTGTTAGCTGAGGACTCTCCCTCCACCCATGGCATCTTGCAGTCATGAACCCAAAGGTACCCTGTTTCCTGACCAGGGACCTCGGTAAGGCAGCTGCTGAGATCTCATCAGTGATTCTGATGGGTCGTAGACTGAGGCCATCCCAGTGTGAGCAGGGCATATGCTCCTCATGGTCTGTGCCTGCAGAGCCTGTAATGCCTCCCAGGTGTGCACTAGCTTGGCCCCTGAACCATAAATGTGCCTTTTCTGCCACAATAAATGCCTGTGACCCCAGTGAATCTTTTTTAAATGACAGCTTCACTGAGATGTAATTCATATAACCATACAATTCACCCATTTAAAGTGCATAATTCACTGGTTTTTAGTATAATCACAGGTATGTACAAACATTACCACAATCAATTTTAGAACACTTTCATCACCCCAAAAAGAAACCTCATCCCCTTTAGCTATCACACCCCTACCCTCTCACCACCCCCTCCCCAGCTCTAAGCAACCACTAATCTACTTTCTGTTTGTATGAATTTGCCCATTCTCAACATTCCATAAGCATGGAATCATATATGCGGTCTTTTGTGACTGACTTCTTTCACTAAGCATAATGTTTTCAAGGTTCTTCCATGCGGTAGCTCCTGGCTATAGTTAGGGTTTTTTGTTTTGTTTCGCTTTTATGGCTGAATACTATTCCAGTGTATGGCTATATTACATTTTGTTTATTCATTCATTGGTTGGTGGCCATTTGGGTTATTTCCTCCTTTGGGCTATTATGAATAATGCCGCTATGAACATTCATGTACAGATTTTGTGCAGACATGTTTCCATCTCTCTTGGATATATCTAGGAGTAGAATTACTGGGTCATATGGTAACTCTATGTTCAACTGTTTAAGGAACTGCCAGATTGTTTTTCAAAGCCGCCGCACCATTTCACATTCCCACCAGAAACGTATGAGGGTTCCAATTTCTCCAAATCCTTGCCAATATGTGTTATCATCTGATGTTTTAAAATCATAACCATCCTAGTGGGTGTGAAGTGATATTCCAATGCAGTTTTGATTTGTATTTCCTAATGACTAATGATGCTGAGCTTCTTTAGGTGTGCTTATTGGCCATTTGTATATCTTTTGAGAAATATCTATTTAGATCCAATGCCCATTTTTATTTTTTTAATTTCTTTCTTTTTCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTAGAGAGTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCACCTCCTAGGTTCATGCCATTCTCCTACCTCAGCCTCCTGAATAGCTGAGACTACAGGCGCCCACCACCACGCCCTGCTAATTTTTTTTTTCTTTTTTTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTTAGCCAGGATGGTCTCGATCTCCTGGCCCCATGATCCGCCTGCCTCAGCCTCCCAAACTGCTGGGATTACAGGCGTGAGCCACCACACCCAGCTTATTTCTTAATTTCTATATAAAAATAGAGACAAGGTCTCACTATGTTGCCCAGGTTTGTCTTAAACTCCCAGACTCAAATGATCCTGCCACCTCGGCCGCCCAAAGTGGTGGGATTTTAGGCATGAGCCATCCTGCCCAGCCCATTGCTCATTTTTAAATTGGGCTGTCTTCTTATTGTTGACTTGTAAGATTCTTTATATACACTGGATATAGTCCCTCCTCAAATATATCACTTGCAAATATTTTCTCCAATTGTTTGGGTTGTCTTTTCACTTTCTTAATAATGTCTTTTGAAACATAGAAGCTTTTGATTTTGATGAGGTCCAATTTATCTATTGTTTCGCTTGTTGTTTGTGCCTTAGGTGTTATAGCTCAGAATCCACTGCCAAATCCAAGGTCATGCAGATTCACCCCAAGTTTTATTCTAAGAGTTCTATGGTTTTAGCTCTTCATTTAGGCCTTTACTCCATTCTGATTTAACTTTTGTATATGGTGTGAAGTAGGGGTCTAACATCATTCTTTTGTAACATGGATATCCAGTTATACCAGCACCATTTGTTAAAAAGATTATTTTCTCAGGCTGGGCACAGTAGCTCATGCCTGTAATCCCAGAAATTTGGGATGCCAAGACAGGTGGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAATCCCATCTCTACTAAAAATACAAAAATTAACCGGGCGTGGTGGTGCACACCTATAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGTTTGCAGTGAGCCAAGATGGTGGCACGGCACTCCAGCCTGGGTGACAGAGCGAGACTCTATCAAAAAAAAAAAGATTATTTTATCAATTGAAACTCGACCCCTTAAACCTTACACAAAAATTAACTCAAGATGGATTAAATACTTAAATGTAAAACCCCAAACAATAAAAACTCTAGAAGAAAATCTAGGCAATACCATTTGAGACATAGGCACAGGCAAAAGATTTCATGACAGAAACTTCAAAAGCAATTGCAACAAAAGCAAAAATTGACACATGAGATCTAACTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAGCAAACAGACAACCTATAGAATGGGAGAAGATGTTTGCAACCTATCCATCTGACAAAGGTCTAATATCCAGAGTCTACAAGGAACTCAAACAAATTTACAAGAAAAAAAAAAACCCATTAAAAAGTGGGCAAAGGACATGAACAGGCGCTTCTCAAAAGAAGACATTCAAGCAGCCAACGAACATATGAAAAAAAGCTCATCATCACTGGTTGTTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTCACAATGGCAATTATTAAAAAGTCAAGAAACAACAGATGCTGACGAGGCTGTGGAGAAATAAGAATATTTTTACACTGTTGGTGGGAATGTAAACTAGTTCAACTATTGTGGAAGGGAGTGTGGCAATTCATCAAAGACCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGAATATAAATCATTCTATTATGAAGAATTCATGCACGTGTATATTCATTGCAGCACTATTCACAATAGCAGAGACATGCAATCAACCAAAATGCCCACCAATGATAGACTGGATAAAGAAAATGTGGTACATATATACCATGGAATATTATGCCATAAAAAGGGATAAGATCATGTCCTTTGCAGGGACATGGATGGAGCTAGAAGCCATTATCCTCAGCAAACTAACCCAGGAACAGGAAAGCCAAACACTGCATGTTCTCACTCACAAATGGGAGCTCAACAATGAGAACACATGGACACAGGGAGGAGAGCAACACACACTGTGGCCTGTCGGAGGGGTTGGGGGAGGGAGAGCATCAGGAAAAATAGCTAATGTATGCTGGGCTTAATACTTGGGTGATGTGTTGATAGGTACAGCAAACCACTGTGGCACACATTTACCTATGTAACAAACCTGCACATCCTACACATGTACCCCAGAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTTTCTCCCATTGAATTGTCTTTGCACACTTGCCAAAAATCAGTTGGTACAGGGCCAGGCGCGGTAGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGTTGGGCAGATCACGTGAGGTCAGGAGTTCTGAGACCAGCCTGGGCAACATGTTGAAACCCCATCTCTACTAAAAATACAAAAATCTGACAAGTGTGGTGTGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGTAGGTTGCAGTGAGGCGAGAGCGCACCACTGCACTCCAGCCTGGGTGACAAGAGCAAAACTCCGTCTCAAAAACAATACAAATAAAAATAAAGAGTGTGTTGTTTCATTTCCACAGTTGTGAATTTTACAGATTTCCATCTGTTATTGATTTCTAGTCTCATTCTTATGGTCAGAGAAGATACTTTATATGATTTCAATATTTTAAAACTTAGAGACCTTTTTTTGTGATCCATCCTGGAGAATGTTTCATGTTCCCTTGAGAATAATGTATATTCTACTGTTGTTGGAGGGAAGTGTTTTGTATATGTCCATTAGAGCTAGTTGGTTTATAGAAAGGTTTGAGTTCTCTATATCCTTACTGATCTTCTGTCCGGTTCTATCCACTACCGAAAGTGGGGTCTCCAACTATTATTGTAGAACGGTCTATTTCTGACTTTGATTCTGTCCATTTCTGCTTTATATATTTTCCGGATCTGTTATTAAGTGCATGAATGTTAATCATTGTTACATTTTATTGTACTGAAACTTTTATTAATATATAATGTTCTTCTTTGCCTTTTGTAACAATTTTTGATTTAAAGTCTATTTTGTCCGATATCAGTATAGCCACCCAGCTCTCTTTTGATTACTATTTGCATGGAATATCTTTTTTTACCCCTTCACTTTCAATCTATGTGTGTCTTTCGATCTAAAGTGAGTCTCTTTTAGGCAGCATATAATAGGAACATGGGAGTGTTTTTTGGTTGACTGTTTTATCCATTCTGCCAATCTCTTACCTTTTGACTGCCTATTTTACTCTATTTAAAGGAATTCCTGATAAGAAAGCACTATTTCTGCCACATTGCTGTGTATGTATGTATGTATGTATGTATGTATTGAGACAGGGTCTCACTCTTTCACCCAGGCTGGAGTGCAGTGGCACGTCTCAGCTCACTGCAGCCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCTTCCGCCTCCTGAGTAGTTGGGATTACAGGCATCAGCCACCACGCCTGGCTAATATTTCTATTTTTAGTAGAGACTGGATTTCACCATGCTGGCCAGGCTGGTCTTGAACTCCTGACACCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGTGATTACAGGCATGAGCCACCATGCCTGGCCTGCTGTTTATTTTCTGCATGTCTTATGTCTTTTTTCCCCTCAGTGTATCTTTTATTGTCTTCTGTGTTTAATTAATTTTTTCTAGTATACCATTTTGATTCCTTCTCCTACTTTTTTTTTCCTGTACATTTTAAAGTTATTTTCTTAGTGGTTACCCTGGGGGTCACAATAAACATCTTAAATTTATAACAGTCTAGTTCAAATTAATAGCAACTTAGCTTTAATAGTATGCAAAATATACATACAGTATATAAATAATATATAACTCTGTCCTCCCCCTTTATGTTATTATTGTCACAAGTTACATCTTTATACAGTATGTGCACACTAGCATATATTTATAATCATTGTTTTATACATTTGTCTTTTAAGTCATATAGGAAAAATGGGAGATACAAACCAAAAATACAATAATACTGGCTTTGACATCAGCATATGTAGTTACCTCCATTGGTGTTATTTTTTCATATGGCTTCTAGTTACTGTCTAGTTTCCTTTCATTTCAGCCTAAAGGACTCCCTTTAGCATTTCTTGTGGGCAGGTCTACTGGCAATAAATCCCCTCAGCTTTTGTTTATCTGGGAATGTCTTAATTCCTCATTCATCTTTGAAGGATAGTTTTATGGAATATAGAATTCTTCTTTGATCTTTTTACTTTCAACAGCTTAAATATGTCAAACCACTACCTTCTGGCCTTCATAGTTTCTGATGAAAATTTTGCTGTTAATCTTATAGAGGATCCCTTGTACATGATGAGTCACTTCTCTCTTGCTGCTATCAAGATTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTAGAGAGATAGGGTCTCACTACGTTGCCCTGGCTGGTCTTGAACTCCTGGCCTCAAGCGATCCTCTGGCCTCAAAGATTCTGTCTTTCAACTGTCTGATTGTAATGTATCTCAGTGAAAATCTCTATGAGTTTATTCTACTTGGAGTTCACTGAGTTTCTTTGATATGTGGATCCATATCTTTCACTAAATTTAGAAAATTTTCAGACATTATTTCTTCAACTATTTTTTCTTTTTCTTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTCTGAAGACAGGGTCTCACTCTGTCACCCATCATGTAGCGGCATGATCTTGGCTCACTGCAGCCTCCACCTCCCAGGCTCAAGCAATTCTCCCACCTCAGCTTCCTGAGTAGCTAGGACCACAGGCATGTGCCATCACATCCGGCTAATTTTTCGTATTTTTGGTAGAGACAGGTTTTGGCCATGTTGCCCAGACTGGTCTTGAACTCCTGGGCTCAAGCGATCTGCCCACCTTTGCCTTCCAAAGTGCTGGGATTACAGGTGTAAGCCACCATGCCTGGTCGATTTCTACAAATATTTTTTTTTTCTGCTCCTTTCTCTTTATCGTCTCTCTTTCTCCTTCCAGGACTTCTATTAGAGTATGTTGCTATGCTTGATGGTGTCCCAGAGGTCTCTTAGGCTTTATTCATTTTTCTTTCTATTCCTGAAACTGGATAATCTCCATGGATTTAGTTTCAAGTTTGTTGATTCATTCTTCTGCCTGCCCAGATCGGTTGAATCCCTCTCGTGAATTTTTCAATTTAGTTATGGTATTTTTTATTATTTTATTTTATTTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAATCTCCGCCTTTCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTTGCTGGGACTAAAGGTGCCCGCCACCATGCCCAGCTAATTTTTGTATTCTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGACCTGAGCCACCCCACCTGGCATTTTGAATGCTTTTTAGCTTTTTGAAAACTGGACATTTTAAATATTATAACGTGGTGACTCTGGAAATAAGATTATTCCTCCCTCCCCAGGGTTTATTGCTGCTTGTTATGGGTCATACTTGTTTGTTTAGTGACTTTTCTAAACTGTTTTCTGCAAAATATTGTAATTTTTGTCCATATTGCTCCCCCTCATGCGAGCAAGCCACACCAGGAAGGCAGACCGCCAACCTTATGGCCATCACTGATGCACAGAGTGGGAGATATTAGGTGTCTGTGAGGATAGTGACTTCTGTGTGTCATATGCACAGATAGGGATTTCCATGAGCACACACAACAAAGAATACGGTCTTTATAAAAGCAGTTTAGAAAAGTCACTAAACAACGACCAACTACGACCCACAACAAGCAGCAATAGCAAAGCCTGGGGAGGAGGTGAATCTCATTTCCAGGGTTACCAAACTATAATATTTCAAATGTCCAGTTTTCAACAAACAGCAAAAAAAAAAAAAAAAAATTACATGGCATGAAACAAAAGTTAGGCTGGGCACAGTGGCTCACGCCTGTTATCCCAGCACTTTGAGAGACCGTGGCAGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACTCTGTCTCTACTAAAAATACAAAAAAGTTAGCTGGGCATGGTGGCACGCACCTGTAATCCCAGCTATTTGGGAGGCTGAGACTGGAGAATCGTTTGAACCCGGGAGGAGGAGGTTGCAGTGAGCTGAGATAGTGCTATTGCACTCTAGCCTGGGGCAACAAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGAAAGAAAGAAAAGTTAAAATGCCTATGTTTTCCTCCCAAAATTTAGTAGCTTCCTCATTAAGCATTCCCCTGGTTATTGTAAGATTTTTATTAGATTCTGGAGACCCAAAAAAAGTTTACTCTGATCATTTTTGCCAGCTTAATCGTAGCTTTGGTGGAGGGCTGAAATTGTGGAGCTCTCTAATCCTCCATTTTCAGTTGCTACCTGTCTGGCTAGTTTGAGTCCAAAGGGAAAGACAAATGCAGCACACACATCCTTACCCATGGGCAGTGAAAGCAGATGTGACTGGCCCTGCAGACTGATGTGGGTGGCATGCACTGGCCTCAGTGACTTTGTGTCTCCAGAGCCTCATGTGGGGTTTGGTTTTATGCTAACATTGGCTTTTCTCAGTCCATGCTGAAATATGTTGGGAATCACCACCAGCAGAGGCACAGGGACTTGGGAAAGGGGACCACATCACTATTCAGCACTGGCAGGCAAATCCCACCTGAAAAGGAAGGAGACGGCAAGGAATCCTGATGGGGAGATAGTCCTTGGGCTCCCTGCTCTACCTGAAAGAGCTGAGGTTGCATTCGTGCTGGCGGGATGCAGCCAGGCCACTTGGGTTTGAAAATCTCTTATTTTTCAGGGCCTAACCTTTACTTCTATCAATCTGAGTTCTTCCCCTCCCTCTTCTGCAGTTGGCCTGTTTACAGGGCCCTGCCCAGTTGACCACAAAGGCCCAGCATTGGCCAGGGAAGGCAGGAGGGCTCCTGGGGAGGCGCATGTTGTAGAGGGAGTGCTGGAGGACAGGGAAGCCAAAGGTGCCACCAAGAGGACTGGGCATGCACGGGCCTCCATAGCACAGGCTGGGAAGGAAGCACAGATCCCTCTCCACATGAGGCTGGGCCACCCCTGGACTAGCCTTGCCCGTAAGGGCCTGGCTTTGTTTGCTAAGTGTGAGCAGGGCTGTGGCCCCTCCTGGTCTCAAGACAAAACCAGGCAGAAATGCATTTTTTTTTTTTTTTAGAAAACACTTTTCTTCATAAAGTTTGTTTTTTAAAATACATACTCATATTGTGAAAATTTTAGAATGTACATGAAAATATAAAGAAGAAAAAAAATTAACTTGACATTTACATACACCCCTTAAAGGTCACCACCAGACACATGGGGAGTATTTACCCACCTCTTTTTCAGAGTGGAGAATGCAACTCTCAGCTTTTATTTATTTATTTATTTATTTTTAGACGGAGCCTCACTCTGTCACCAGGCTGGAGTGGAATGCCACACTCTTGGCTCACTGCAACCTCCGAGTCCAGGGTTCAAGCGATTCTCCTGCCCCAGGTTCCCGAGTACCTGGGACTATAGGCACACACCAACACACCTGACTAATTTTGTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAAGCTGGTCTCAATCTCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAAACACTGCGCCTGGCAACTCTCAGCTTTTAATCCACATTCCTACACTTGATGTAACAATTTTAATATTTACTATAAGCATTTCATTGTGTTCTCATATTTTCTTTACAAATAGTACTGTAAATGATTTCACATCAAGCTATTATACATTTGAACATTTCATGATTTGCTGAACAATTTTTCCGTGGTTTGTTGTGCCAAGGTTTTATCATTAACAGACAAACAGGATGGGTCTTTCTGAGGCCTGGCATCTGCCCCCTGCTCTCACAGGCCCTCCTCCCCAGGCCCGCCTGCCCTCCCCCATCAACTCTGTCCACATGCTTCTGTCTCTGATCTGTACTTGGCCTTCCCTGGAGCCCTCGTTCCTAGCAGGATGAGGGCAGCATGGGAAGAAAGTGGGTAGCACTTACTGTATTGGGTGAGGGGTAGAGGGTACCAATAGCACCCAGCTCACGGCAGCCACACCACCCTCTCAGTGTGCAGCAGCACATCAGACAGTAGACTGGCTTTGTAATCCCACCATCTGTGTCGGCGCCATTGTTCCTTCTGTCCTGGACCTTGACAAAGCTACCACTCCAGCGCCTCCTGGGAGTCCCCGTGGCTTCTGCTTTATACATTTTGGTGTTAGACTTTCTGTGAATTGCTCCCTCAGTTACCTTCTGTGTGCTACGTGATGGTCCTGCCTGGAATCCAACTTGGTCGAAAAACAGACCGGGCCATTTCCCTCTGGGGACGAGACCATGGCCTGTCCAGTGCTGTGCCCTCTCTCAGCCCTGACCGGCTGGCCCCTCCACAGCGGCCACCTTCCCAGAGTAGGCGGCAAGAGGAAACATTTGTCCTGTCTTCTCACCTGACCTGGCTGCTTCAAACATTAGGACCACCGGCGCTCCTTAGGCTGCCCTGGCTGTGCGGGGACAGTGGCCCCTGACTGCCTCTCCCCAGTCATCCTGGAGATGTTGCCCCCAAGTGGTCCTTTCCCACATCACCCAGACCCTGGGCTCTCCTAAGGAATTGGAGGCCAAGCAGGACAGACAGCCGCACTCTGAGCTCCATCCTCCACCTCAGCACATGCAGCCCATCCCTCTGTCTGCCCCACTCTGTGCTCCCTCTCCTTCACGTCTGTCCTCTCCATGGACTGCTTGCCTTTGGCCCACAAGCTTTATTGTCTCCTGGGTCCTAAAACAAAACTTTCTAAAAAGTCAGAACAAGAAATCATAAAAGACCAGGCTGGGAGTGGTGGCTCGCAACTATAATCTCATCATTTTAGGAAGCTGAGGCAGGAGGATTGCTTGAGGAGTTTGAGACCAGCTTGGGCGACAGAGTTAGATTCCCATCTCTAAAACTAAAAATAAATACATAAGTAAAAGAGCAGCTGACTGGATTGTGCAATTTTGATTTACTTGTTTGGAAAGCGGAACTTAGAAGGTTTTGGGTTTTTATGAGACAGGATCTCATGCCGTCACTCAGACTGGAGTGCAGTAGCACGATCACGGCTCACCACAGCCCCAACCTCCTGGGATCAGGTGATCCTCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCACACCACCATACCCGGCTAATTTTTGGATTTTTTGTAGAGACGGAGTTTCACCATGTTGCCCAGGCTGGTCTCGAACTCCTGAACTCAAGCAATCTGCCCATCTCAGCCTCCCAAAGTGCTGGGATTACAGGCACGAACCACCACACCCGGCCCAGAACTTAGAATTCAAAAGGCAAATAAAGTGGCAGAACATCTCACCACACATCACAGAGGATTAGCTCTGAAGAGATAGAATAGTGCACTCAGAGACTTCCTGGGGAACATCAGAACACTTCCAAGGGAGCCTGTAAAATGTCTATTTCCAGGAAAAAAATCAATCATCAAGACTTACGTAATAGGGTGTTTGTCATCAGGGAACACGGGAATCGATTGAAATGCCCATCCACTGAGATAGGCTCAGTAAAAAAATAGCACGTCCGTAAGATGAGGCCTCCGCAGCTACAATAGCACCATTTGCAAAGAATCATGATGCCGGAGCTGCTATGGTGTGTGTCCCGTGACAAGTGGCAAGGTACAAAAGGATATGTGATCTATGCCACCACCACCTTTGTACACAGCCTGTTAAGAATGAATTTTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29715:HG4_Ill_SVrefine2DISCOVARDovetail_7193:HG3_PB_SVrefine2PBcRDovetail_4573:HG4_PB_SVrefine2Falcon1Dovetail_6147:HG4_PB_SVrefine2PBcRDovetail_4998:HG2_PB_SVrefine2Falcon1plusDovetail_12165:HG2_PB_SVrefine2PB10Xhap12_7270:HG2_PB_SVrefine2PBcRplusDovetail_11371:HG2_PB_SVrefine2Falcon2Bionano_4702:HG3_PB_SVrefine2Falcon1Dovetail_6112;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_4573;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00578951;ClusterMaxSizeDiff=0.00578951;ClusterMaxEditDist=0.00957661;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=19918;DistBack=3;DistForward=14401;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=8:145091982-145091982;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9998;PctRecOverlap=0.9999;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:./.:0:14:0:2:./.:0:0:0:0:1/1:0:31:1/1:0:628:.:19765:.
chr8	145180981	HG2_PB_PB10Xdip_29718	C	GGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTCTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGTGGAGGAATATTCTACCGGACGGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGTGGAGGAATATTCTACCGGACGGCCGCACTGGAGGAATATTCTACCTGACGGCCCGCGGTGGAGGAATATTCTACCGGACGGCCCTCGGTGGAGGAATATTCTACCGGACGGCCCGCGGTGGAGGAATATTCTACCGGACGGCCCGCGGTGGAGGAATATTCTACCGGACGGCCCGCGGTGGAGGAATATTCTACCGGACGGCCCGCGGTGGAGGAATATTCTACCGGACGGCCCGCGGTGGAGGAATATTCTACCGGACGGCCCTCGGTGGAGGAATATTCTACCGGACGGCCCTCGGTGGAGGAATATTCTACCGGACGGCCCTCGGTGGAGGAATATTCTACCGGACGGCCCTCGGTGGAGGAATATTCTACCGGACGGCCCGCGGCGGGGAATATTCTACCGGACGGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGTGGAGGAATATTGTACCGGAAGGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCACGGTGGAGGAATATTGTACCGGACCGCCCGCGGCGGGGAATATTCTATCGGACCGCCCGCGGCGGGGAATATTCTATCGGACAGCACTCGGTGGAGGAATATTCTACCAGACAGCCCGCAGTGGAAGAATATTCTACCGGACAGCCCTCGGTGGAGGAATATTCTACCGGACAGCCCTCGGCAGGGAATATTCTACCGGACAGCCCGCGGTGGAGGAATACTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGCGGGGAGCATTCTACCGGACAGCCCGCAGTGGAGGAACATTCTACCGGACAGCCCTCGGTGGAGGAACATTCTACCGGACAGCCCTCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGAACATTGTACCGGACGGCCCGCGGTGGAGGACTATTCTACCGGACGGCCCGCGGTGGAGGACTATTCTACCGGACGGCCCGCGGTGGAGGACTATTCTACCGGACGGCCCGCGGTGGAGGACTATTCTACCGGACGGCCCTCGGCGGGGAATATTCTACCGGACGGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGCGGGGAATATTCTATTGGACGGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTCTACCGGACAGCCCGAGGCGGGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTCTACCGGACAGCCCGCGGCGGGGAATATTCTATCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGCGGGGAATATTCTACCGGACAGCCCGCGGTGGAGGAATATTCTACCGGACAGCCCTCGGTGGAGGAATATTCTACCGGACAGCCCTCGGTGGAGGAATATTCTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGGGGGAATATTCTACCGGACAGCCCGCGGCGGGGAATATTCTACCGGACAGCCCGCAGTGGAGGAATATTCTACCGGACAGCCCGCAGTGGAGGAATATTCTACCGGACAGCCCTCGGTGGAGGAATATTCTACCGGACAGCCCTCGGCGGGGAATATTCTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGCGGGGAATATTCTAACGGACAGCCCGCGGTGGAGGAATATTCTACCGGACAGCCCTCGGTGGAGGAATATTGTACCGGACAGCCCTCGGTGGAGGAATATTGTACCGGACAGCCCGCGTTGGAGGAATATTGTACCGGACAGCCCGCGTTGGAGGAATATTGTACTGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGCGGGGAATATTCTGTCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGCGGGGAATATTCTACCGGACAGCCCGCGGCGGGGAATATTCTACTGGACAGCCCGCAGTGGAGGAATATTCTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGTGGCGGGGAATATTCTGTCGGACAGCCCGCGGTGGAGGAATATTGTACCCGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGCGGGGAATATTCTACCGGACAGCCCGCGGTGGGGAATATTCTACCAGACAGCCCGCAGTGGAGGAATATTCTACCGGACAGCCCACAGTGGAGGAATATTCTACCGGACAGCCCTCGGTGGAGGAATATTCTACCGGACAGCCCTCGGCGGGGAATATTCTACCGGACAGCCCGCGGTGAAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCACGGTGGAGGAATATTGTACCGGACAGCCCACGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGTGGCGGGGAATATTCTACCGGACAGCCCGCAGTGGAGGAATATTCTACCGGACAGCCCTCAGTGGAGGAATATTCTACCGGACAGCACTCGGTGGAGGAATATTCTACCGGACAGCCTTCGGTGGAGGAATATTCTACCGGACAGCCCTCGGTGGGGGAATATTCTACCAGACAGCCCTCGGTGGGGGAATATTCTACCGGACAGCCCGCGGCGGGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGCGGGGAATATTCTACCGGACGGCCCGCGGTGGAGGAATATTTTACCGGACGGCCCGCGGCGGGGAATATTCTACCGGACGGCCCTCGGTGGAGGAATATTCTCCCTGACGGCCCGCGGTGGAGGAATATTCTACCGGACAGCCCGCGGTGGAGGAATATTCTACCGGACAGCCCGCGGAGGGGGAATATTCTACCTGACAGCCCTCGGTGGAGGAATATTTTACCTGACAACCCTCGGTGGAGGAATATTGTACCGGACAGCCCGCGGCGGGGAATATTCTACCGGACAGCCCGCGGCGGAGGAATATTGTACCGGACAGCCCTCGGCGGGGAATATTCTACC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12166:HG2_PB_HySA_17975:HG3_PB_HySA_14933:HG2_PB_assemblyticsPBcR_26579:HG2_PB_PB10Xdip_29718:HG4_PB_HySA_14482:HG4_PB_assemblyticsfalcon_26744:HG3_PB_assemblyticsfalcon_27230:HG2_PB_SVrefine2PBcRplusDovetail_11372:HG2_PB_SVrefine2PB10Xhap12_7271:HG2_PB_SVrefine2Falcon2Bionano_4703:HG3_PB_SVrefine2Falcon1Dovetail_6113:HG4_PB_SVrefine2Falcon1Dovetail_6148;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_29718;NumExactMatchSVs=1;ClusterMaxShiftDist=0.23719;ClusterMaxSizeDiff=0.23719;ClusterMaxEditDist=0.269863;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=4949;DistBack=-1;DistForward=841;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=478;REFWIDENED=8:145180503-145180980;PctSeqSimilarity=0.8913;PctSizeSimilarity=0.8022;PctRecOverlap=0.8022;SizeDiff=-1220;StartDistance=322;EndDistance=322;GTMatch=0;TruScore=83;MatchId=5543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:62:1/1:1:26:3:27:./.:0:0:0:0:0/0:31:1:1/1:5:231:.:6400:.
chr8	145258161	HG2_PB_SVrefine2PBcRplusDovetail_11374	G	GGGGGGGGAGCGCCCGCTGTCTGTGGAGGGGCGGGGGGGGGAAGCGCCCGCTGTCTGTGGAGGGGCGGGGGGGGAAGCGCCCGCTGTCTGTGGAGGGGGGGGAGCGCCCGCTGTCTGTGGAGGGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11374:HG3_PB_assemblyticsfalcon_27232:HG4_PB_pbsv_10012:HG3_PB_SVrefine2Falcon1Dovetail_6114:HG2_PB_assemblyticsPBcR_26581:HG2_PB_SVrefine2Falcon1plusDovetail_12168:HG2_PB_SVrefine2Falcon2Bionano_4705:HG2_PB_SVrefine2PB10Xhap12_7273;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_11374;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0887097;ClusterMaxSizeDiff=0.0562249;ClusterMaxEditDist=0.25;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=125;DistBack=36;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=7;REFWIDENED=8:145258160-145258169;PctSeqSimilarity=0.9694;PctSizeSimilarity=0.9921;PctRecOverlap=0.7008;SizeDiff=-1;StartDistance=37;EndDistance=37;GTMatch=0;TruScore=88;MatchId=5544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:42:1/1:3:11:3:31:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr8	145273691	HG2_PB_PB10Xdip_29720	T	CTGCTCTCCCCTCCCCTCCCCCCTCCCCTCTCCCCTCCCCTCTCCCCTCCCCTCTCCCCTCCCCTCTTCCCTCCCCTCCTCTCTTCCCTCCCCTCCTCTCTTCCCTCCCCTCCCTCTCCCCTCCCGTCTCCCCTCCCGTCTCCCCTCCCGTCTCCCCCTCCTCCCCTCCCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCTCCCCTCCCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCTCCCCTCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCCCCTCCTCCCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCCTCCTCCCCTCCTCCCCTCCCCCCTCCCCTCCTCCCCTCCTCCCCTCCTCCCCTCCTCCCCTCCTCCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCTCCCCTCCTCCCCTCCCCTCCTCCCTCCCCTCCTCCCCTCCTCCCCTCCCCTCCTCCCTCCTCCCCTCCTCCCCTCTCCTCCCCTCCTCCCCTCCCCTCCCCTCCTCCCCTCCTCCTCTCCCCTCCCCTCCCCTCTCCCCTCCCCTCCCCCTCTCCCCTCCCCTCCCCTCCTCCTCCCCTCCCCTCCTCCCCTCCCCTCTCCTCCTCCCCTCCCCTCTCCTCCTCCCCTCCCCTCCCTCCCCTCCTCCCCTCCCCTCCCCTCCCCCCTCCTCCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6149:HG4_PB_pbsv_10013:HG2_PB_PB10Xdip_29720:HG2_PB_pbsv_9989:HG2_PB_SVrefine2PB10Xhap12_7274:HG3_PB_pbsv_9717:HG2_PB_SVrefine2PBcRplusDovetail_11375:HG3_PB_SVrefine2PBcRDovetail_4576:HG2_PB_SVrefine2Falcon1plusDovetail_12169:HG3_PB_SVrefine2Falcon1Dovetail_6115;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_29720;NumExactMatchSVs=1;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.230539;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=699;DistBack=-51;DistForward=38;DistMin=-51;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=8:145273692-145273690;PctSeqSimilarity=0.9837;PctSizeSimilarity=0.9873;PctRecOverlap=0.9859;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5545.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:37:./.:1:23:1:2:./.:0:0:0:0:./.:0:0:0/1:3:17:.:.:.
chr8	145288226	HG3_PB_SVrefine2PBcRDovetail_4577	A	ATTCCCTCCCCCGCAGCTCCTGCACCCACCATCAACCTTCCCTCCCCCGCAGCTCCTGCACCCACCATCAACCTTCCCTCCCCCGCAGCTCCTGCACCCACCATCAACCTTCCCTCCCCCGCAGCTCTGCACCCCACCATCCGCCTTCTCTCCCCCGCAGCTCCTGCACCCCACCATCCACCTTCTCTCCCCCGCAGCTCCTGCACCCCACCATCCACCTTCCCTCCCCGCAGCTCCTGCACCCACCATCCACCTTCCCTCCCCCGCAGCTCCTGCACCCACCATCCACCTTCCCTCCCCCGCAGCTCCTGCACCCACCATCCACCTTCCCTCCCCCGCAGCTCCTGCACCCACCATCCACCTTCTCTCCCCCGCAGCTCCTGCACCCCACCATCCACCTTCCCTCCCCCGCAGCTCCTGCACCCACCATCCACCTTCCCTCCCCCGCAGCTCCTGCACCCCACCATCCACCTTCCCTCCCCCGCAGCTCCTGCACCCACCATCCACCTTCCCTCCCCCGCAGCTCCTGCACCCACCATCCACCTTCCTCCCCCGCAGCTCCTGCACCCCACCATCCACCTTCTCTCCCCCGCAGCTCCTGCACCCCACCATCCACCTTCTCTCCCCCGCAGCTCCTGCACCCCACCATCCACCTTCTCTCCCCCGCAGCTCCTGCACCCCACCATCCACCTTCTCTCCCCCGCAGCTCCTGCACCCCACCATCCACCTTCTCTCCCCCGCAGCTCCTGCACCCCACATCCACC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4577:HG2_PB_pbsv_9990:HG2_PB_HySA_17986:HG2_PB_PB10Xdip_29721:HG4_PB_HySA_14488:HG2_PB_HySA_17985:HG2_PB_SVrefine2Falcon2Bionano_4706:HG2_PB_SVrefine2Falcon1plusDovetail_12170:HG3_PB_SVrefine2Falcon1Dovetail_6117:HG2_PB_SVrefine2PB10Xhap12_7275:HG2_PB_SVrefine2PBcRplusDovetail_11376;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_4577;NumExactMatchSVs=1;ClusterMaxShiftDist=0.172249;ClusterMaxSizeDiff=0.172249;ClusterMaxEditDist=0.195965;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=763;DistBack=-1;DistForward=69;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=225;REFWIDENED=8:145288227-145288451;PctSeqSimilarity=0.9727;PctSizeSimilarity=0.9502;PctRecOverlap=0.9253;SizeDiff=-40;StartDistance=-40;EndDistance=-40;GTMatch=1;TruScore=94;MatchId=5546.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:39:1/1:0:13:0:7:./.:0:0:0:0:./.:0:1:0/1:4:25:.:.:.
chr8	145537468	HG3_PB_SVrefine2Falcon1Dovetail_6121	CGC	GCCTCCCCGCGCCGCCTCCCCGCGCCGCCTCCCCGCGCCGCCTCCCGCGCGCCTCCCCGCGCCGCGCCGCCTCCCCGCTCCCCGCGCCGCTCCCCGCCTCCGCGCGCCGCCTCCCCGCCTCCCCGCCTCCCGCCTCCCCGCCTCCCCGCCTCCCCGCCTCCCCGCTTTCCCCGCCCCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12173:HG2_PB_pbsv_9997:HG2_PB_SVrefine2PB10Xhap12_7280:HG3_PB_assemblyticsfalcon_27238:HG4_PB_HySA_14493:HG3_PB_SVrefine2Falcon1Dovetail_6121:HG2_PB_HySA_17989:HG4_PB_SVrefine2Falcon1Dovetail_6152:HG3_PB_pbsv_9725:HG4_PB_pbsv_10018:HG2_PB_SVrefine2PBcRplusDovetail_11379:HG2_PB_SVrefine2PB10Xhap12_7279:HG4_PB_SVrefine2PBcRDovetail_5001:HG2_PB_SVrefine2Falcon2Bionano_4709;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6121:HG3_PB_assemblyticsfalcon_27238;NumExactMatchSVs=2;ClusterMaxShiftDist=0.229885;ClusterMaxSizeDiff=0.229885;ClusterMaxEditDist=0.347826;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=175;DistBack=5;DistForward=13209;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=150;REFWIDENED=8:145537318-145537467;PctSeqSimilarity=0.9434;PctSizeSimilarity=0.9211;PctRecOverlap=0.356;SizeDiff=-15;StartDistance=115;EndDistance=117;GTMatch=0;TruScore=74;MatchId=5548.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:38:1/1:4:22:0:6:./.:0:0:0:0:./.:4:3:./.:.:.:.:.:.
chr8	145570825	HG2_PB_SVrefine2PB10Xhap12_7281	T	TAAGACACCAACATTGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_14947:HG2_PB_pbsv_9998:HG4_PB_HySA_14494:HG3_PB_pbsv_9726:HG4_PB_pbsv_10020:HG2_PB_assemblyticsPBcR_26588:HG4_PB_assemblyticsfalcon_26753:HG3_PB_assemblyticsfalcon_27239:HG2_Ill_breakscan11_4035:HG2_PB_PB10Xdip_29726:HG2_PB_HySA_17990:HG2_10X_SVrefine210Xhap12_7146:HG4_Ill_GATKHCSBGrefine_6927:HG3_PB_SVrefine2PBcRDovetail_4580:HG3_Ill_manta_2331:HG3_Ill_MetaSV_5439:HG2_PB_SVrefine2PBcRplusDovetail_11380:HG2_PB_SVrefine2PB10Xhap12_7281:HG2_PB_SVrefine2Falcon2Bionano_4710:HG2_PB_SVrefine2Falcon1plusDovetail_12174:HG4_PB_SVrefine2Falcon1Dovetail_6153:HG3_PB_SVrefine2Falcon1Dovetail_6122:HG3_PB_HySA_14948;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12174:HG2_PB_SVrefine2Falcon2Bionano_4710:HG2_PB_SVrefine2PB10Xhap12_7281:HG2_PB_SVrefine2PBcRplusDovetail_11380:HG3_Ill_MetaSV_5439:HG3_Ill_manta_2331:HG3_PB_SVrefine2PBcRDovetail_4580:HG4_Ill_GATKHCSBGrefine_6927;NumExactMatchSVs=8;ClusterMaxShiftDist=0.153061;ClusterMaxSizeDiff=0.153061;ClusterMaxEditDist=0.219931;PBcalls=18;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=293;DistBack=20144;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=8:145570826-145570840;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5549.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:36:1/1:2:14:0:9:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr8	145739100	HG3_PB_SVrefine2Falcon1Dovetail_6124	A	ATGAGGAGCGGTTGGCGTGGGCAGTGGGGAGTGAGGAGGGGTCGGCGTGTGCAGTGGGGAGTGAGGAGGGGTCGGCGTGGGGAGTGAGGAGGGGTCGGCGTGGGCGGTGGGGAGTGAGGAGGGGTCGGCGTGGGCGGTGGGGAGTGAGGAGGGGTCGGCGTGGGCGGTGGGGAGTGAGGAGGGTCGGCGTGGGCGGTGGGGAGTGAGGAGGGGTCGGCGTGGGCGGTGGGAGTGAGGAGGGTCGGCGTGGGCGGTGGGGAGTGAGGAGGGGTCGGCGTGGGCGGTGGGGAGTGAGGAGGGGTCGGCGTGGGCGGTGGGGAGTGAGGAGGGTCGGCGTGGGCGGTGGGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12177:HG2_PB_PB10Xdip_29728:HG2_PB_HySA_17997:HG3_PB_HySA_14955:HG4_PB_HySA_14503:HG4_PB_SVrefine2PBcRDovetail_5003:HG4_PB_SVrefine2Falcon1Dovetail_6155:HG3_PB_SVrefine2Falcon1Dovetail_6124:HG2_PB_SVrefine2Falcon2Bionano_4713:HG2_PB_SVrefine2PB10Xhap12_7284:HG2_PB_SVrefine2PBcRplusDovetail_11383;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6124;NumExactMatchSVs=1;ClusterMaxShiftDist=0.184655;ClusterMaxSizeDiff=0.184655;ClusterMaxEditDist=0.210938;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=348;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=164;REFWIDENED=8:145739101-145739264;PctSeqSimilarity=0.9799;PctSizeSimilarity=0.9694;PctRecOverlap=0.6574;SizeDiff=-11;StartDistance=-118;EndDistance=-118;GTMatch=1;TruScore=86;MatchId=5551.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:3:24:1:22:./.:0:0:0:0:./.:0:1:1/1:1:8:.:.:.
chr8	145894609	HG2_PB_SVrefine2Falcon2Bionano_4717	A	AAGCCAGGCACAGTGGCTCATGCTGATAATCCCAACACTTTGGGAGGGTGAGGTGGGATGGTTGCTTGAGGCCAGGAGTTCAAGATCAGCCTGGGCAACATAGTAAGACTCTAAGAAAAAAAAATTTTTTTTAAATATAGAAATGTACAGGTAAGTCCAAAACTATAAAACTTAGAAGAAAACACACGAGTAAATCTTTTTTTTTTTTTTTTAATTTGAGACAGGGTCTTGCTCTGTTACCCTGGCTGGAGTACAGTGGGGCTTCCACAGCTGATGCAGCATCAAACTTCTGGATTCAAGCAATCCTGCTGCCTTAGCTTCCCAAGGAGCTAAGGCTACAGGTGTGCACCACACCTGGCTAATTCTATTTTTTGTAGAGATGGGATCTCGCTATGTTGCCCAGACTGGTCTTGAACTCCTGGCCTCGAACTCCTGGCCTCAAGTGATCCTCCCATCTAGGCCTCACAAAGTGCTGGGAATACAGGCACAAGCCACTGCACCTGAGCAGGAATAAATAAATAAATATATATGTATATATATATATATTTTTTAAACACAGTCTCACTCTGTCGCCTAGGGTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAAACTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTATAGGTGTGTGCCACCATACTGGGCTAATTTTTGCATTTTTTAGTAGAGACAGGGTTTTACCATATTGGCCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCCAGCCAGGAGTAAATCTTTATGATGTTGGGTTAAGCAATGATTTCTTAGCTATAATATCAAAGTACAAGCAGCAACAACAACGACAACAACAATTATTTCTATCAAAATTAAAAACTTTTGTGCTTCAAATGATACCATCAAGAAAGATAAAAATTCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7158:HG2_PB_pbsv_10009:HG3_PB_pbsv_9737:HG2_PB_PB10Xdip_29733:HG4_Ill_MetaSV_5483:HG2_Ill_MetaSV_5260:HG3_Ill_MetaSV_5441:HG3_PB_assemblyticsfalcon_27254:HG4_PB_assemblyticsfalcon_26763:HG4_PB_SVrefine2PBcRDovetail_5006:HG3_PB_SVrefine2PBcRDovetail_4591:HG3_PB_SVrefine2Falcon1Dovetail_6132:HG4_PB_SVrefine2Falcon1Dovetail_6162:HG4_Ill_SVrefine2DISCOVARDovetail_7207:HG3_Ill_SVrefine2DISCOVARDovetail_7439:HG2_PB_assemblyticsPBcR_26599:HG2_PB_SVrefine2PBcRplusDovetail_11389:HG2_PB_SVrefine2PB10Xhap12_7288:HG2_PB_SVrefine2Falcon2Bionano_4717:HG2_PB_SVrefine2Falcon1plusDovetail_12182:HG2_Ill_SVrefine2DISCOVARplusDovetail_13326;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7158:HG4_PB_SVrefine2Falcon1Dovetail_6162:HG4_Ill_SVrefine2DISCOVARDovetail_7207:HG3_Ill_SVrefine2DISCOVARDovetail_7439:HG2_PB_assemblyticsPBcR_26599:HG2_PB_SVrefine2PBcRplusDovetail_11389:HG2_PB_SVrefine2PB10Xhap12_7288:HG2_PB_SVrefine2Falcon2Bionano_4717:HG2_PB_SVrefine2Falcon1plusDovetail_12182:HG2_Ill_SVrefine2DISCOVARplusDovetail_13326;NumExactMatchSVs=10;ClusterMaxShiftDist=0.157084;ClusterMaxSizeDiff=0.157084;ClusterMaxEditDist=0.219713;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=983;DistBack=12416;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=8:145894610-145894665;PctSeqSimilarity=0.9966;PctSizeSimilarity=1;PctRecOverlap=0.9654;SizeDiff=0;StartDistance=-34;EndDistance=-34;GTMatch=0;TruScore=98;MatchId=5553.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:./.:0:6:0:3:./.:0:0:0:0:1/1:0:23:./.:19:182:.:3464:.
chr8	146037006	HG3_PB_HySA_14976	A	AGGTGCAGACTTGCAGAATGGAAGCAAAGGCTGAGACAGAGTGGGAGAGACACCGACAGTAAAGCTCAGCCAGGTGCAGACTGCAGCCTGGAAGCAAAGGCTGAGACAGGGTGGGAGAGACACGGACAGTAAAGCTCAGCCAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12187:HG3_PB_SVrefine2Falcon1Dovetail_6136:HG3_PB_HySA_14976:HG3_PB_pbsv_9744:HG2_PB_pbsv_10013:HG3_PB_SVrefine2PBcRDovetail_4595;NumClusterSVs=6;ExactMatchIDs=HG3_PB_HySA_14976;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0631579;ClusterMaxSizeDiff=0.0631579;ClusterMaxEditDist=0.234875;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=142;DistBack=-518;DistForward=386;DistMin=-518;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1190;REFWIDENED=8:146036755-146037944;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9859;PctRecOverlap=0.2797;SizeDiff=2;StartDistance=102;EndDistance=102;GTMatch=0;TruScore=75;MatchId=5555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:28:./.:9:23:17:2:./.:0:0:0:0:0/0:13:0:./.:.:.:.:.:.
chr8	146046957	HG2_PB_SVrefine2Falcon1plusDovetail_12189	G	GGGCCCCTCGGTGTTCGTGGGTCTTTGTGAGCTGGGGAGAGCTGGAGAGAGGCCCCTCCGCGTTCGTGGGTCTTTGTGAGCTGGGGAGAGCTGGAGAGAGGCCCCTCCGCGTTCGTGGGTCTTTGTGAGCTGGGGAGAGCTGGAGAGAGGCCCCTCCGCGTTCGTGGGTCTTTGTGAGCTGGGGAGAGCTGGAGAGAGGCCCCTCCGCGTTCGTGGGTCTTTGTGAGCTGGGGAGAGCTGGAGAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11395:HG2_PB_pbsv_10015:HG4_PB_pbsv_10037:HG4_PB_SVrefine2PBcRDovetail_5009:HG2_PB_SVrefine2Falcon2Bionano_4721:HG2_PB_SVrefine2Falcon1plusDovetail_12189;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12189:HG2_PB_SVrefine2Falcon2Bionano_4721;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0282828;ClusterMaxEditDist=0.180723;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=245;DistBack=3885;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=154;REFWIDENED=8:146046958-146047111;PctSeqSimilarity=0.9961;PctSizeSimilarity=1;PctRecOverlap=0.9551;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=98;MatchId=5556.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:0|1:33:2:1:17:./.:0:0:0:0:0/1:17:5:./.:.:.:.:.:.
chr8	146171900	HG2_PB_SVrefine2Falcon1plusDovetail_12192	A	AGGGTCTGTATCCTGCTGTGGGCCCGTGTCCTGCTGTGGGTCTGTACCCTGCTGTGGGCCTGTGTCTGCTGTGGGGCTGTGTCCTGCTGTGGGCCCGTGTCCTGCTGTGGGCCTGTGTCCTGCTGTGGGCCTGTACCCTGCTGTGGCCTGTGTCCTGCTGTGGGGCTGTGTCCTGCTGTGGGCCCGTGTCCTGCTGTGGGCCTGTGTCCTGCTGTGGGGCCTGTACCCTGCTGTGGGCCATACCCTTCTGTGGGCCTGTACCCTGCTGTGGGGCTGTGTCCTGCTGTGGGCCCGTGTCCTGCTGTGGGCCTGTGTCCTGCTGTGGGCCTGTACCCTGCTGTGGGCCATACCCTTCTGTGGGCCTGTACCCTGCTGTGGGCCTGTGTCCTGCTGTTGGGCCTGTGTCCTGCTGTGGGGCTGTGTCCTGGTGGGCCTGTGTCCTGCTGTTGGCCTGTGTCCTGCTGTTGGGCCTGTGTCCTGCTGTGGGCCTGTACCCTACTGTGGGCCATACCCTGCTGTGGGCCTGTGTCCTGCTGGGGCCTGTACCCTGCTGTGGGCCATACCCTTCTGTGGGCCTGTACCCTGCTGTGGGCCTGTGTCCTGCTGTGGGCCTGTGTCCTGCTGTGGGGCTGTGTCCTGCTGTGGGCTGTGTCCTGCTGTTGGGCTTGTGTCCTGCTGTGGCCTGTGTCCTGCTGTGGGCCTGTGTCCTGCTGTGGGGCTGTGTCTGCTGTGGGGCTGTGTCCTGCTGTGGGCCTGTGTCCTGCTGTTGGGCTTGTGTCCTGCTGTTGGCTTGTGTCCTGCTGTGGGGCCTGTGTCCTGCTGTGGGCCTGTGTCCTGCTGTGGCCTGTGTCCTGCTGTTGGCTTGTGTCCTGCTGTTGGGCTTGTGTCCTGCTGTGGGGCCTGTGTCCTGCTGTGGGGCCTGTACCCTGCTGTGGGCCATACCCTTCTGTGGGCCTGTACCCTGCTGTGGGCCTGTGTCCTGCTGTGGGCCTGTGTCCTGCTGTGGGCTGTGTCCTGCTGTGGGCCTGTATCCTGCTGTTGGGCCTGTGTCCTGCTGTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12192:HG3_PB_SVrefine2Falcon1Dovetail_6142;NumClusterSVs=2;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12192;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00662565;ClusterMaxSizeDiff=0.00473261;ClusterMaxEditDist=0.023663;PBcalls=2;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1058;DistBack=19692;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=730;REFWIDENED=8:146171901-146172630;PctSeqSimilarity=0.8403;PctSizeSimilarity=0.6928;PctRecOverlap=0.5666;SizeDiff=325;StartDistance=-296;EndDistance=-296;GTMatch=0;TruScore=69;MatchId=5557.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:31:0|1:28:2:2:19:0|1:17:0:0:12:0/1:16:9:0/1:25:37:.:1036:.
chr9	817447	HG2_PB_SVrefine2PBcRplusDovetail_11406	G	GGTGGCTCACGCCTGCAATCCCAGCATTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGGCCAATATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAACTGGGTGTCGTGGCGCATGCCTGTAGTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGCTGCGGTGAGCCAAGATCACGCCATTGTACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAGTCTGTTCTGTTAGCCTATGAATTTTTGTCTAGGTTTTTAAGAATTAATGCAAAATTTAAAGTTTTGCATTTTTTTATGTTGATTCAATCTCCATTGTAAAATACAAGTGAAAAAACTACATGTAAAAGATGAGAAAAAGAAAACCAAGTGTAAAAACTACTGATCCAGACAAAATGAAATTCAAGAAAAAAAATCATTAAAAGTGACAAGAAAAGACATTTCATTCTCCATAACAAGTATAATCTACTGAGAAAATGTAATAATCATGAGTCTTTATGCCCCAACAACAGAGCTTCAAACTATACAGGGAAAACCCCAATTAATTCAAGACAGGAAATGAACAGCTCTGTGTTCACACTTTCCTCAGAAATCAACAAATCAAGTGGGCATAAAGTAAGAATGTGGAGCATTTGAAAACAAAATGAGCCTGACTGTATGTATCTGTGTATAAATAAAATTTTGAACCTACCAGAGATAACACAGTCTTTTAAAATAGCCATAGACCACGCTCCCAAATTATCATTAAGGATTAAGTTAGACAGGAAAGCTCAATAAATTCTAAATATCAGAATTTGTTTTTAGGAAAATAGCATTACATGAATTTTGTTGTTGCCAGAAAGTCCATAAAATTCACTTTGAAAATTATCTGCCGGGCCAGGTGTGGTGGCTCACGCCTGTAACACCAGCACTTTAGGAAGCCGAGGTGGGTGGATCACTTGAGGTCAGAAGTTCGAGACCAGCCTGGCCAACATGGTGAAACATTGTCTCTACTTAAAAATATAAAAAAATTAGCTGGGTATCGTAGCTCGTGCCAGTAGTCTCAGCTACCTGAGACGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGCCTGGGCAAAGAGTGAAAAAAAAAGAAAAAGTCACCTTCCTAGACCGGGTGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11406:HG2_PB_pbsv_10026:HG2_PB_PB10Xdip_31257:HG2_PB_HySA_18048:HG4_PB_HySA_14545:HG4_Ill_MetaSV_5492:HG4_Ill_GATKHCSBGrefine_6936:HG2_Ill_GATKHCSBGrefine_6806:HG2_PB_SVrefine2PB10Xhap12_7313:HG4_PB_SVrefine2PBcRDovetail_5016:HG4_Ill_SVrefine2DISCOVARDovetail_7216;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_11406:HG4_PB_SVrefine2PBcRDovetail_5016:HG4_Ill_SVrefine2DISCOVARDovetail_7216;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0409771;ClusterMaxSizeDiff=0.0409771;ClusterMaxEditDist=0.136685;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=1251;DistBack=8298;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=275;REFWIDENED=9:817448-817722;PctSeqSimilarity=0.9822;PctSizeSimilarity=0.9936;PctRecOverlap=0.811;SizeDiff=-8;StartDistance=-234;EndDistance=-234;GTMatch=0;TruScore=92;MatchId=5558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:28:0|1:19:1:0:26:./.:0:0:0:0:0/1:11:3:0/1:44:67:.:2390:.
chr9	848906	HG2_Ill_GATKHCSBGrefine_6807	A	AATTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCACGATCTTTG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_31258:HG4_PB_pbsv_10053:HG4_Ill_GATKHCSBGrefine_6937:HG3_Ill_GATKHCSBGrefine_6708:HG2_Ill_GATKHCSBGrefine_6807:HG2_Ill_MetaSV_5267:HG3_PB_pbsv_9761:HG2_PB_assemblyticsfalcon_27356:HG2_PB_HySA_18049:HG4_PB_SVrefine2PBcRDovetail_5017:HG2_PB_SVrefine2Falcon2Bionano_4729:HG3_PB_SVrefine2PBcRDovetail_4608:HG2_PB_SVrefine2PBcRplusDovetail_11407:HG2_PB_SVrefine2Falcon1plusDovetail_12201:HG2_10X_SVrefine210Xhap12_7173:HG2_PB_SVrefine2PB10Xhap12_7314:HG3_PB_HySA_14993:HG4_PB_HySA_14546:HG2_PB_PB10Xdip_31259;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6807:HG3_Ill_GATKHCSBGrefine_6708:HG4_Ill_GATKHCSBGrefine_6937;NumExactMatchSVs=3;ClusterMaxShiftDist=0.228482;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.260597;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=317;DistBack=8;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=9:848907-848906;PctSeqSimilarity=0.9718;PctSizeSimilarity=0.9463;PctRecOverlap=0.9433;SizeDiff=-18;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=95;MatchId=5559.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:33:1/1:0:6:1:14:./.:0:0:0:0:0/1:4:6:0/1:10:50:.:.:.
chr9	998541	HG2_PB_SVrefine2Falcon1plusDovetail_12203	A	ACCTTCCGTTTCCCGGAGCCGCCTGCGTGAATGTTCTTCCCGGCTCTGCTGCCCCCTGGAGGCTAGTGGAGGTAAATGCGTGAAGTCGGCGTTTTCCCTCCTTCCGTTTCCCGGAGCCGCCTGCGTGAATGTTCTTCCCGGCTCTGCTGCCCCCTGGAGGCTAGTGGAGGTAAATGCGTGAAGTCGGCGTTTTCCCTCCTTCCGTTTCCCGGAGCCGCCTGCGTGAATGTTCTTCCCGGCTCTGCTGCCCCCTGGAGGCTAGTGGAGGTAAATGCGTGAAGTCGGCGTTTTCCCTCCTTCCGTTTCCCGGAGCCGCCTGCGTGAATGTACTTCCCGGCTCTGCTGCCCCCTGGAGGCTAGTGGAGGTAAATGCGTGAAGTCGGCGTTTTCCCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12203:HG3_PB_pbsv_9763:HG4_PB_pbsv_10056:HG2_PB_pbsv_10029:HG4_PB_SVrefine2PBcRDovetail_5019;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12203:HG4_PB_SVrefine2PBcRDovetail_5019;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0616523;ClusterMaxSizeDiff=0.0616523;ClusterMaxEditDist=0.193939;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=392;DistBack=35;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=492;REFWIDENED=9:998542-999033;PctSeqSimilarity=0.999;PctSizeSimilarity=1;PctRecOverlap=0.6641;SizeDiff=0;StartDistance=-132;EndDistance=-132;GTMatch=0;TruScore=88;MatchId=5560.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:./.:24:8:0:11:./.:0:0:0:0:./.:0:0:./.:3:5:.:.:.
chr9	1045133	HG4_Ill_SVrefine2DISCOVARDovetail_7218	T	TCGAGGGAGTGGACTCAGCGCCTCTTGTTCGGCCTTGTGTGTCTATGATTTAAATCCTGCTTCCCACGGAGGAGAGATGAGAGTCTAGATCGCACCGTCCTTTTTGTTCAGTTTTTTCGACGAG	20	PASS	ClusterIDs=HG3_PB_HySA_14996:HG3_PB_pbsv_9764:HG4_PB_pbsv_10057:HG2_PB_assemblyticsfalcon_27359:HG2_PB_pbsv_10030:HG2_PB_PB10Xdip_31264:HG2_PB_PB10Xdip_31263:HG2_PB_SVrefine2Falcon1plusDovetail_12204:HG4_PB_SVrefine2PBcRDovetail_5020:HG4_Ill_SVrefine2DISCOVARDovetail_7218:HG4_Ill_MetaSV_5493:HG4_Ill_GATKHCSBGrefine_6938:HG3_PB_SVrefine2PBcRDovetail_4609:HG3_Ill_MetaSV_5448:HG3_Ill_GATKHCSBGrefine_6709:HG2_PB_SVrefine2PBcRplusDovetail_11409:HG2_PB_SVrefine2PB10Xhap12_7316:HG2_PB_SVrefine2Falcon2Bionano_4731:HG2_Ill_manta_2863:HG2_Ill_SVrefine2DISCOVARplusDovetail_13340:HG2_Ill_MetaSV_5268:HG2_Ill_GATKHCSBGrefine_6808:HG2_10X_SVrefine210Xhap12_7175:HG4_PB_HySA_14551:HG2_PB_HySA_18052;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7175:HG2_Ill_GATKHCSBGrefine_6808:HG2_Ill_MetaSV_5268:HG2_Ill_SVrefine2DISCOVARplusDovetail_13340:HG2_Ill_manta_2863:HG2_PB_SVrefine2Falcon2Bionano_4731:HG2_PB_SVrefine2PB10Xhap12_7316:HG2_PB_SVrefine2PBcRplusDovetail_11409:HG3_Ill_GATKHCSBGrefine_6709:HG3_Ill_MetaSV_5448:HG3_PB_SVrefine2PBcRDovetail_4609:HG4_Ill_GATKHCSBGrefine_6938:HG4_Ill_MetaSV_5493:HG4_Ill_SVrefine2DISCOVARDovetail_7218:HG4_PB_SVrefine2PBcRDovetail_5020;NumExactMatchSVs=15;ClusterMaxShiftDist=0.064;ClusterMaxSizeDiff=0.0634921;ClusterMaxEditDist=0.227451;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=123;DistBack=46342;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=9:1045134-1045135;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:80:1/1:1:20:0:26:./.:0:0:0:0:1/1:0:10:./.:.:.:.:.:.
chr9	1286989	HG4_Ill_SVrefine2DISCOVARDovetail_7219	C	CTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTCCTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTCCTTCCTCCTTCCTTCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7317:HG2_PB_HySA_18053:HG2_PB_PB10Xdip_31266:HG2_PB_PB10Xdip_31265:HG3_PB_pbsv_9765:HG2_PB_SVrefine2Falcon2Bionano_4732:HG4_PB_HySA_14556:HG4_PB_pbsv_10058:HG4_PB_SVrefine2PBcRDovetail_5021:HG4_Ill_SVrefine2DISCOVARDovetail_7219:HG2_PB_SVrefine2Falcon1plusDovetail_12205:HG2_PB_SVrefine2PBcRplusDovetail_11410:HG2_Ill_SVrefine2DISCOVARplusDovetail_13341:HG2_PB_pbsv_10031;NumClusterSVs=14;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_7219:HG4_PB_SVrefine2PBcRDovetail_5021;NumExactMatchSVs=2;ClusterMaxShiftDist=0.306667;ClusterMaxSizeDiff=0.306667;ClusterMaxEditDist=0.313333;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=167;DistBack=-105;DistForward=18;DistMin=-105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=45;REFWIDENED=9:1286990-1287034;PctSeqSimilarity=0.9373;PctSizeSimilarity=0.8503;PctRecOverlap=0.6647;SizeDiff=25;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=81;MatchId=5562.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:5:18:1:9:./.:0:0:0:0:0/1:2:10:./.:.:.:.:.:.
chr9	1583809	HG2_PB_HySA_18057	T	TATATATGTGCCATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCTCCCGAGTAGCTGGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG2_PB_HySA_18057:HG3_PB_pbsv_9766:HG2_PB_pbsv_10032:HG2_PB_assemblyticsfalcon_27363:HG2_PB_SVrefine2Falcon1plusDovetail_12206;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_18057;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0290698;ClusterMaxSizeDiff=0.0290698;ClusterMaxEditDist=0.156977;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=340;DistBack=26731;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=9:1583810-1583826;PctSeqSimilarity=0.9898;PctSizeSimilarity=0.9971;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5563.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:0|1:36:0:0:33:./.:0:0:0:0:0/1:26:7:0/1:11:36:.:.:.
chr9	1665609	HG2_Ill_MetaSV_5269	A	AAGCACTGGGTTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6150:HG3_PB_pbsv_9767:HG2_Ill_breakscan11_4036:HG2_PB_pbsv_10033:HG2_PB_HySA_18058:HG2_PB_assemblyticsfalcon_27364:HG3_Ill_MetaSV_5449:HG3_Ill_GATKHCSBGrefine_6712:HG2_Ill_MetaSV_5269:HG2_Ill_GATKHCSBGrefine_6811:HG2_PB_SVrefine2Falcon1plusDovetail_12207;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6811:HG2_Ill_MetaSV_5269:HG3_Ill_GATKHCSBGrefine_6712:HG3_Ill_MetaSV_5449;NumExactMatchSVs=4;ClusterMaxShiftDist=0.125196;ClusterMaxSizeDiff=0.125196;ClusterMaxEditDist=0.222222;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=324;DistBack=20041;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=9:1665610-1665625;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5564.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:43:0|1:51:0:0:43:./.:0:0:0:0:0/1:24:18:0/1:11:34:.:.:.
chr9	2276591	HG3_Ill_250bpfermikitraw_13156	G	GACCCCTTCTCTCCGTCTCTACCCCTTTTCCACTTTTCTGGAGGGCAAGAAACCCCCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30821:HG3_PB_HySA_15001:HG4_PB_pbsv_10060:HG4_PB_HySA_14561:HG4_Ill_svaba_12670:HG3_Ill_svaba_12717:HG2_Ill_svaba_12581:HG2_PB_HySA_18066:HG4_Ill_GATKHC_16214:HG2_PB_pbsv_10036:HG4_Ill_250bpfermikitraw_13431:HG3_Ill_GATKHC_16146:HG3_Ill_250bpfermikitraw_13156:HG2_Ill_scalpel_9567:HG2_Ill_GATKHC_16198:HG2_Ill_GATKHCSBGrefine_6813:HG2_Ill_250bpfermikitraw_13544:HG2_Ill_150bpfermikitraw_12717:HG2_PB_assemblyticsfalcon_27369:HG2_PB_PB10Xdip_30822;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12717:HG2_Ill_250bpfermikitraw_13544:HG2_Ill_GATKHCSBGrefine_6813:HG2_Ill_GATKHC_16198:HG2_Ill_scalpel_9567:HG3_Ill_250bpfermikitraw_13156:HG3_Ill_GATKHC_16146:HG4_Ill_250bpfermikitraw_13431:HG4_Ill_GATKHC_16214;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.295652;PBcalls=8;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=4634;DistForward=87;DistMin=87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=222;REFWIDENED=9:2276566-2276787;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:49:1/1:7:23:4:17:./.:0:0:0:0:0/1:2:16:./.:.:.:.:.:.
chr9	2298288	HG2_Ill_GATKHCSBGrefine_6814	G	GATGGAAGGCAGGGTACAATATTTTATAAGAGATCATGATTGCCTCTCTGGGGAGACAACGTTTGAGTCAATATTTGAATCATAAAGAAGAAACAACCATGTGAGAACTGGAGGAAGGGCTTTTAGCGAGCAGAAACAGTCAGTGCAGAGACCCAGAGGCTGGAACCAATTTTGCCTGTCTGGAGAACAGAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_9771:HG4_PB_pbsv_10061:HG3_Ill_SVrefine2DISCOVARDovetail_7454:HG2_10X_SVrefine210Xhap12_7177:HG2_PB_HySA_18067:HG4_Ill_SVrefine2DISCOVARDovetail_7222:HG4_Ill_MetaSV_5496:HG4_Ill_GATKHCSBGrefine_6940:HG3_PB_assemblyticsfalcon_27299:HG3_PB_SVrefine2PBcRDovetail_4612:HG3_Ill_manta_2339:HG3_Ill_Spiral_10575:HG3_Ill_MetaSV_5451:HG3_Ill_GATKHCSBGrefine_6715:HG3_Ill_250bpfermikitraw_13157:HG3_Ill_150bpfermikitraw_12747:HG2_Ill_SVrefine2DISCOVARplusDovetail_13347:HG2_Ill_GATKHCSBGrefine_6814:HG2_Ill_breakscan11_4037:HG2_PB_pbsv_10037;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6814:HG2_Ill_SVrefine2DISCOVARplusDovetail_13347:HG3_Ill_150bpfermikitraw_12747:HG3_Ill_250bpfermikitraw_13157:HG3_Ill_GATKHCSBGrefine_6715:HG3_Ill_MetaSV_5451:HG3_Ill_Spiral_10575:HG3_Ill_manta_2339:HG3_PB_SVrefine2PBcRDovetail_4612:HG3_PB_assemblyticsfalcon_27299;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0559796;ClusterMaxSizeDiff=0.0559796;ClusterMaxEditDist=0.184539;PBcalls=6;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=10;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=192;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=9:2298289-2298288;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:42:0|1:32:1:1:37:./.:0:0:0:0:0/1:24:7:./.:.:.:.:.:.
chr9	2351287	HG2_Ill_GATKHCSBGrefine_6816	T	TAAGAATTATGATTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4038:HG3_PB_assemblyticsfalcon_27300:HG3_PB_pbsv_9772:HG3_PB_SVrefine2Falcon1Dovetail_6152:HG2_PB_pbsv_10039:HG2_PB_HySA_18069:HG2_PB_assemblyticsfalcon_27371:HG2_PB_SVrefine2PB10Xhap12_7321:HG4_PB_HySA_14563:HG2_PB_SVrefine2Falcon2Bionano_4735:HG2_Ill_MetaSV_5270:HG4_PB_pbsv_10063:HG2_Ill_GATKHCSBGrefine_6816:HG2_PB_SVrefine2Falcon1plusDovetail_12212:HG4_Ill_GATKHCSBGrefine_6942:HG3_Ill_MetaSV_5452:HG3_Ill_GATKHCSBGrefine_6716:HG4_PB_SVrefine2PBcRDovetail_5023:HG4_Ill_MetaSV_5497;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6816:HG2_Ill_MetaSV_5270;NumExactMatchSVs=2;ClusterMaxShiftDist=0.184375;ClusterMaxSizeDiff=0.184375;ClusterMaxEditDist=0.341906;PBcalls=12;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=9:2351288-2351303;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5567.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:46:0|1:31:5:1:41:./.:0:0:0:0:0/1:30:21:0/1:5:45:.:.:.
chr9	2397100	HG4_Ill_GATKHCSBGrefine_6943	C	CCCAGTACATCCCAAGTGGCTGAGCAGTAATCTTTTTTTTTTTTTTGCTTAGTTGTCTATGTACTCATCATTAATCTCTACTCTTAGCCAGTTGT	20	PASS	ClusterIDs=HG2_PB_pbsv_10040:HG4_PB_SVrefine2PBcRDovetail_5024:HG4_PB_pbsv_10064:HG4_Ill_svaba_12673:HG4_Ill_manta_2439:HG4_Ill_SVrefine2DISCOVARDovetail_7223:HG4_Ill_Krunchall_14083:HG4_Ill_GATKHC_16216:HG4_Ill_GATKHCSBGrefine_6943:HG4_Ill_Cortex_3768:HG4_Ill_250bpfermikitraw_13433:HG4_Ill_150bpfermikitraw_12873:HG2_PB_SVrefine2Falcon2Bionano_4736:HG2_Ill_svaba_12584:HG2_Ill_manta_2864:HG2_Ill_SpiralSDKrefine_17523:HG2_Ill_GATKHCSBGrefine_6817:HG2_Ill_Cortex_9192:HG2_Ill_250bpfermikitraw_13546:HG2_10X_SVrefine210Xhap12_7178;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7178:HG2_Ill_250bpfermikitraw_13546:HG2_Ill_Cortex_9192:HG2_Ill_GATKHCSBGrefine_6817:HG2_Ill_SpiralSDKrefine_17523:HG2_Ill_manta_2864:HG2_Ill_svaba_12584:HG2_PB_SVrefine2Falcon2Bionano_4736:HG4_Ill_150bpfermikitraw_12873:HG4_Ill_250bpfermikitraw_13433:HG4_Ill_Cortex_3768:HG4_Ill_GATKHCSBGrefine_6943:HG4_Ill_GATKHC_16216:HG4_Ill_Krunchall_14083:HG4_Ill_SVrefine2DISCOVARDovetail_7223:HG4_Ill_manta_2439:HG4_Ill_svaba_12673;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0820513;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.201005;PBcalls=4;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=94;DistBack=3;DistForward=18845;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=9:2397101-2397101;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:43:0|1:40:1:1:37:./.:0:0:0:0:0/1:20:12:./.:.:.:.:.:.
chr9	2814057	HG4_Ill_250bpfermikitraw_13441	T	TCTAACCACCTCAAAATGAATAACTAATTACAACCACTCAGGGAAAATGAACTTAAAATTTCAGTAACAAACGGGAAAACACACAAAAAACATACAGAACTTGTTACAAGGCAGGGAACTCTCTCAAGGAAAACAAGCTCCAAAGTGAACTCAAACTATTTTTTTTTTTTTTTGAGACGGAATCTCACTCTGTTGCCCAGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_31189:HG3_PB_pbsv_9776:HG3_PB_HySA_15007:HG2_PB_pbsv_10044:HG4_PB_pbsv_10067:HG4_PB_HySA_14568:HG4_PB_SVrefine2PBcRDovetail_5025:HG4_Ill_SVrefine2DISCOVARDovetail_7225:HG4_Ill_250bpfermikitraw_13441:HG3_Ill_SVrefine2DISCOVARDovetail_7457:HG2_PB_SVrefine2PBcRplusDovetail_11416:HG2_PB_SVrefine2PB10Xhap12_7326:HG2_PB_SVrefine2Falcon1plusDovetail_12214:HG2_Ill_SVrefine2DISCOVARplusDovetail_13351:HG2_Ill_250bpfermikitraw_13554:HG2_10X_SVrefine210Xhap12_7180:HG3_PB_SVrefine2PBcRDovetail_4616:HG2_PB_SVrefine2Falcon2Bionano_4740:HG2_PB_PB10Xdip_31190;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7180:HG2_Ill_250bpfermikitraw_13554:HG2_Ill_SVrefine2DISCOVARplusDovetail_13351:HG2_PB_SVrefine2Falcon1plusDovetail_12214:HG2_PB_SVrefine2PB10Xhap12_7326:HG2_PB_SVrefine2PBcRplusDovetail_11416:HG3_Ill_SVrefine2DISCOVARDovetail_7457:HG4_Ill_250bpfermikitraw_13441:HG4_Ill_SVrefine2DISCOVARDovetail_7225;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0920097;ClusterMaxSizeDiff=0.062954;ClusterMaxEditDist=0.205742;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=200;DistBack=-199;DistForward=-1;DistMin=-199;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=202;REFWIDENED=9:2814058-2814259;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:68:1/1:1:26:0:17:./.:0:0:0:0:./.:2:18:./.:.:.:.:.:.
chr9	3876677	HG2_PB_SVrefine2Falcon2Bionano_4744	A	AGAAGGAAGGGAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGGGAAGGGAGGGGAAGGGAGGGAGGGAGGGGAAGGGAGGGAGGGAGGGAGGGAGGGGAAGGGAGGGGAAGGGAGGGAGGGAGGGAGGGGAAGGGAGGGAGGGAGGGAGGGGAAGGGAGGGAGGGAGGGAGGGGAAGGGAGGGAGGGAGGGAGGGGAAGGGAGGGAGGGAGGGAGGGGAAGGGAGGGAGGGAGGGAGGGGAAGGGAGGGAGGGAGGGAGGGGAAGGGAGGGAGGGAGGGGAAGGAAGGAAGGGAGGGAGGGGAAG	10	PASS	ClusterIDs=HG2_PB_pbsv_10049:HG2_PB_PB10Xdip_31342:HG3_PB_HySA_15023:HG2_PB_HySA_18094:HG2_PB_SVrefine2PB10Xhap12_7330:HG3_PB_pbsv_9781:HG2_PB_SVrefine2Falcon2Bionano_4744:HG2_PB_SVrefine2Falcon1plusDovetail_12218:HG3_PB_assemblyticsfalcon_27321:HG2_PB_assemblyticsfalcon_27387:HG4_PB_SVrefine2PBcRDovetail_5029:HG3_PB_SVrefine2PBcRDovetail_4618:HG2_PB_SVrefine2PBcRplusDovetail_11421;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4744:HG2_PB_SVrefine2PB10Xhap12_7330;NumExactMatchSVs=2;ClusterMaxShiftDist=0.260274;ClusterMaxSizeDiff=0.260274;ClusterMaxEditDist=0.285211;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=304;DistBack=25;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=27;REFWIDENED=9:3876678-3876704;PctSeqSimilarity=0.9984;PctSizeSimilarity=1;PctRecOverlap=0.9803;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=5570.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:./.:0:1:0:1:./.:0:0:0:0:1/1:0:10:0/1:2:7:.:.:.
chr9	4237129	HG2_Ill_MetaSV_5273	C	CAAAAATAATCCTGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAATAAAAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4041:HG2_PB_pbsv_10050:HG3_PB_pbsv_9782:HG4_PB_pbsv_10073:HG3_PB_assemblyticsfalcon_27324:HG2_PB_assemblyticsfalcon_27390:HG2_PB_HySA_18097:HG4_PB_SVrefine2PBcRDovetail_5030:HG4_Ill_manta_2444:HG4_Ill_MetaSV_5501:HG4_Ill_GATKHCSBGrefine_6948:HG3_Ill_GATKHCSBGrefine_6721:HG2_PB_SVrefine2PBcRplusDovetail_11422:HG2_PB_SVrefine2PB10Xhap12_7331:HG2_PB_SVrefine2Falcon2Bionano_4745:HG2_PB_SVrefine2Falcon1plusDovetail_12219:HG2_Ill_manta_2869:HG2_Ill_MetaSV_5273:HG2_Ill_GATKHCSBGrefine_6821:HG2_10X_SVrefine210Xhap12_7184:HG4_PB_HySA_14586:HG2_PB_PB10Xdip_31355:HG2_PB_PB10Xdip_31354;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7184:HG2_Ill_GATKHCSBGrefine_6821:HG2_Ill_MetaSV_5273:HG2_Ill_manta_2869:HG2_PB_SVrefine2Falcon1plusDovetail_12219:HG2_PB_SVrefine2Falcon2Bionano_4745:HG2_PB_SVrefine2PB10Xhap12_7331:HG2_PB_SVrefine2PBcRplusDovetail_11422:HG3_Ill_GATKHCSBGrefine_6721:HG4_Ill_GATKHCSBGrefine_6948:HG4_Ill_MetaSV_5501:HG4_Ill_manta_2444;NumExactMatchSVs=12;ClusterMaxShiftDist=0.135135;ClusterMaxSizeDiff=0.135135;ClusterMaxEditDist=0.205882;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=293;DistBack=59978;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=9:4237130-4237141;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:2:20:1:12:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr9	4339790	HG2_PB_SVrefine2PBcRplusDovetail_11423	G	GGGGGAGGGAAGGGGGAGGGGAGGGGAGGGGGAGGGGGGAGGGGGAGGGGAGGCGGAGGGGAGGGGGAGGGGAGGGGGAGTGGGAGGATGGGGGAGGGGGTAGGGGAGGGGACGGGGAGGGGGTAGGGGAGGGGTGGGGGAGGGGAGGGGGAGGGGAGGGGAGGGGTGGGGGAGGGGAGGGGTGGGGGAGGGGGAGGGGAGGGGTGAGGGGAGGGGGAGGGGAGGGGAGGAGTGGGAGGAGGGGAGGGGGAGGGGAGGGGGAGGGGAGGGGGAGGGGAGGGGAGGGGTGGGGGCAGGGGAGGGGGAGGGGAGGCAGAGGAGGAGGAGGGGGAGGGTGGGGGAGGGGGTA	10	PASS	ClusterIDs=HG3_PB_pbsv_9783:HG4_PB_SVrefine2PBcRDovetail_5031:HG2_PB_PB10Xdip_31356:HG2_PB_PB10Xdip_31357:HG4_PB_pbsv_10074:HG2_PB_SVrefine2PBcRplusDovetail_11423:HG2_PB_pbsv_10052:HG2_PB_SVrefine2PB10Xhap12_7332:HG3_PB_SVrefine2PBcRDovetail_4620:HG2_PB_SVrefine2Falcon1plusDovetail_12220;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_11423;NumExactMatchSVs=1;ClusterMaxShiftDist=0.103397;ClusterMaxSizeDiff=0.103397;ClusterMaxEditDist=0.2694;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=348;DistBack=4862;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=85;REFWIDENED=9:4339791-4339875;PctSeqSimilarity=0.9594;PctSizeSimilarity=0.928;PctRecOverlap=0.816;SizeDiff=-27;StartDistance=-56;EndDistance=-56;GTMatch=0;TruScore=90;MatchId=5572.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:34:1/1:2:13:0:8:./.:0:0:0:0:./.:0:0:0/1:2:9:.:.:.
chr9	6290479	HG2_10X_SVrefine210Xhap12_7194	T	TAAAAAGTATACACACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_9793:HG3_PB_HySA_15040:HG4_PB_pbsv_10084:HG2_PB_pbsv_10062:HG4_PB_HySA_14601:HG2_Ill_MetaSV_5277:HG3_Ill_MetaSV_5461:HG4_PB_assemblyticsfalcon_26850:HG3_PB_SVrefine2PBcRDovetail_4625:HG4_PB_SVrefine2Falcon1Dovetail_6182:HG2_PB_HySA_18115:HG2_PB_PB10Xdip_31417:HG2_PB_PB10Xdip_31416:HG2_PB_assemblyticsfalcon_27403:HG3_PB_assemblyticsfalcon_27338:HG2_PB_SVrefine2Falcon2Bionano_4753:HG2_PB_SVrefine2PBcRplusDovetail_11431:HG2_PB_SVrefine2PB10Xhap12_7341:HG2_10X_SVrefine210Xhap12_7194:HG4_PB_SVrefine2PBcRDovetail_5036:HG2_PB_SVrefine2Falcon1plusDovetail_12226;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7194:HG2_PB_SVrefine2PB10Xhap12_7341:HG2_PB_SVrefine2PBcRplusDovetail_11431;NumExactMatchSVs=3;ClusterMaxShiftDist=0.241688;ClusterMaxSizeDiff=0.241688;ClusterMaxEditDist=0.304294;PBcalls=18;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=714;DistBack=1097;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=9:6290480-6290494;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9972;PctRecOverlap=0.9861;SizeDiff=-2;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=99;MatchId=5573.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:24:0:30:./.:0:0:0:0:./.:0:4:1/1:7:224:.:778:.
chr9	6379206	HG2_PB_HySA_18122	A	AAAATGAGAACAAAGACACAACATACCAGAATCGCTTGGACACATTCAAAGCAGTGTATAGAAATTTATAGTACTAAATGCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCTAACATCAAATTAAAAGAGCTAGAAAAGCAAGAGCAAACACATCAAAAGCTAGCAGAAGGCAGAAATAACTAAGATCAGAGCAGAACTGAAGGAAAAAAAGACGCAAAAAAACCTTCAAAGAAATCAGTGAATCCAGAAGCTGTCTTTTGAAGAGATCAACAAAATTGATAGACCTCTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAATAGATGCAATAAAAAATGATAAAGGGATATCACAACCAATCCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCTCGACACATACATACATCCCCCAAGACTAAACCAGGAAGAAGCTGAATCTCTGAGAACAGACCAATAACAGGCCTCTGAAATTGAGGCAAATAATCAATATCCTTACCAACAAAAAAAGTCGCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAAGAGGAGCTGGTAACCATTCCTTCTGAAACTATCCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCAATCCTGATACCAAAGCTTGGCAAGAGACACAACCAAAAAAGAGATTTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAGTAAAAATACTGGCAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCAATGATCAAGTGGGCTTCATCCCTGGGATGCATGGCTGGTTCAACATACCAAATCAATAAACGTATCCAGCAGATAAACAGAACCAAAGACAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTCAACAAAATTCAACAACTTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGACAATATCATTCTGAATGGGCAAAAACTGGAAGCATTTCCCTTTGGAAAACAGGCACAAGACAGGGATGCCCGCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATGAGGCAGGAGAAGGAAATAAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTCCAGATGACACAATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTACTCAAGCTGATAAGAGACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAGACAGACAGCCAAATCATGAGTGAACTCTCATTCACAATTGCTTCAATAAGAATAAATACTGGGAATCCAACTTACAAGGGATGTGAACGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCATATATCGTGAAAAATGGCCATACTGCCCAAGGTCATTTATAGATCAATGCCATCCCCATCAACCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCCCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCATGCTACCTGACTTCAAAACTATACAACAAGGGCTACAGTAACCAAAAACAGCATGGTACTGGTACCAAAACACAGATATAGACCAGTGGAACAGAACAGAGCCTCAGAAATAATGCCACATTATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACACAAGCAATGGGGAAAAGGATTTCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATAAAGCAGAAAGCTGAAACTGGATCCCTTCCTTATACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTGGACCTAAAACCATAAAAACCCTAGAAGAAAACTAGGCAATATCATTCAGGACATAGACAATGGGCAAGGACTCCATGTCTAAAAACACAAAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCCAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACCACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAAATTTTTGCAACGTACTCATCTTGACAAAGGGCTAATATCCAGAATCTATAATGAACTCAAACAAATTTACAAGAAAAAAACAACCCCATTCAAAAAGTAGGTGAAGGAGATGAACAGACACTTCCCAAAAGAAGACATTTACGCAGCCAAAAGACACATGAAAAAATGCTCATCATCACTTGGCCATACAGAGAAATGCAAATTCAAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGTGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGAAACTTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACGTGTTATTAGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCTAAATGTCCAACAATGATAGACTGGATTAAGAAATGTGGCAATATACACCATGGATATATCTATATGAGAATTACTATGCACCAAAAAAGATGACTATAAAGGAGTATCGGGATGGAGTTTATGTCCTTTGTCAGGGACAGGATGAAATGGAAATTATCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTTAACAATGAGAAACACTGGACACAGGAAGGGGAACATCACAACACCAGGGACTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCTTAGGAGATATACGTAATGCTAAATGACGAGTTAATGGGTGGCAGCATACCAGCATGGCACATGTATACATATGTAACAAACCTGCACATGTGCACAATGTACCCTAAAACTTAAAGGCATAATAATAATAAAATGGAAAAAAAAAACAAAAAGAACTGCATCAACTAACGAGCAAGATAACCAGCTAATATCATAATGACAGGATCAAATTCACACATACATATTAACTTAAATGTAAATGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGATTAAAGAGTCAAGACCCATCAGTGTGCTGTATTAGGAGACCCACTTCATGTGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGGCAGGGTTGCAATCCTAGTCTCAGATAAAACAGACTTTAAACCCAACAAAGATCAAGAGACAAAAGAAGGCCATTACATAGTGGTAAAGGGATCAATTCAACAAGAGAAGCTATCCTAAATATATACGCACCCAATACGGGAGCACCCAGATTCCAAAAAGCAAGTCCTTACAGACCTACAAAGAGACTTACACTCCCACACAACAATAATGGGAGACTTTAAAACCCCACTGTCAACATTAAACAGATCAACAAAACAGAAAGTTAACAAGGATATCCAGGAATTGAACTCGGCCTCTGCACCAAGCGGACTTCATAGACATCTACAGAACTCTCCACCCAAATCAAAAGAATATACATTCTTCTGAAGCACCACACAGCACCTATTCCAAAAACTGATCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACATACTGTCTCTCAGACCATAGTACATAAACTAGAACTCAACAAAATTTAAGAAACTCACTCAAAACTGCTCAACTACATGGACACTGAACAACCGGCTCCTGAATGACTACTGGGTACATAACAAAATAAAGGCAGAAATAAAGATGTTCTTTGAAACC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12227:HG2_PB_HySA_18122:HG2_PB_HySA_18121:HG2_PB_HySA_18120:HG2_PB_PB10Xdip_31419:HG2_PB_PB10Xdip_31418:HG2_PB_HySA_18119:HG2_PB_HySA_18118:HG2_PB_HySA_18117:HG4_PB_SVrefine2Falcon1Dovetail_6183:HG2_PB_SVrefine2Falcon2Bionano_4754:HG3_PB_SVrefine2PBcRDovetail_4626:HG2_PB_SVrefine2PBcRplusDovetail_11432:HG2_PB_SVrefine2PB10Xhap12_7342:HG4_PB_SVrefine2PBcRDovetail_5037;NumClusterSVs=15;ExactMatchIDs=HG2_PB_HySA_18122;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0197465;ClusterMaxSizeDiff=0.0190151;ClusterMaxEditDist=0.067528;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=4140;DistBack=-3219;DistForward=105574;DistMin=-3219;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=9:6387423-6382426;PctSeqSimilarity=0.9826;PctSizeSimilarity=0.987;PctRecOverlap=0.9816;SizeDiff=54;StartDistance=49;EndDistance=49;GTMatch=0;TruScore=98;MatchId=5574.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:5:74:1/1:2:22:3:31:./.:0:0:0:0:0/1:43:29:./.:30:329:.:4031:.
chr9	6708667	HG3_Ill_250bpfermikitraw_13185	A	AATATTATATATTATATATATTATATATAATATTATATAATATATATAATTATATATAATATTATATATTATATATAATTATAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4756:HG3_Ill_scalpel_9705:HG3_PB_pbsv_9797:HG3_Ill_250bpfermikitraw_13185:HG3_Ill_150bpfermikitraw_12773:HG2_Ill_250bpfermikitraw_13577:HG3_PB_assemblyticsfalcon_27345:HG2_PB_PB10Xdip_31424:HG2_PB_PB10Xdip_31423:HG2_PB_pbsv_10065:HG4_PB_pbsv_10087:HG4_Ill_Krunchall_14122:HG4_Ill_GATKHCSBGrefine_6955:HG4_Ill_250bpfermikitraw_13472:HG4_Ill_150bpfermikitraw_12903:HG4_PB_SVrefine2PBcRDovetail_5039:HG4_Ill_SVrefine2DISCOVARDovetail_7244:HG2_PB_SVrefine2PB10Xhap12_7345:HG2_PB_SVrefine2Falcon1plusDovetail_12229:HG3_PB_SVrefine2PBcRDovetail_4628;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13577:HG3_Ill_150bpfermikitraw_12773:HG3_Ill_250bpfermikitraw_13185:HG3_Ill_scalpel_9705;NumExactMatchSVs=4;ClusterMaxShiftDist=0.350282;ClusterMaxSizeDiff=0.350282;ClusterMaxEditDist=0.384181;PBcalls=11;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=83;DistBack=5;DistForward=18;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=149;REFWIDENED=9:6708589-6708737;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5575.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:39:1/1:1:19:2:18:./.:0:0:0:0:0/1:6:46:./.:.:.:.:1098:.
chr9	7852523	HG4_Ill_GATKHCSBGrefine_6964	C	CAAAATTGAGAAAATGGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_18141:HG4_PB_HySA_14619:HG4_PB_pbsv_10097:HG3_PB_assemblyticsfalcon_27356:HG2_PB_pbsv_10076:HG4_PB_assemblyticsfalcon_26868:HG2_Ill_GATKHCSBGrefine_6831:HG4_PB_SVrefine2PBcRDovetail_5048:HG4_Ill_GATKHCSBGrefine_6964:HG3_PB_SVrefine2Falcon1Dovetail_6159:HG4_PB_SVrefine2Falcon1Dovetail_6192;NumClusterSVs=11;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_6964:HG4_PB_SVrefine2PBcRDovetail_5048;NumExactMatchSVs=2;ClusterMaxShiftDist=0.115152;ClusterMaxSizeDiff=0.115152;ClusterMaxEditDist=0.183486;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=330;DistBack=58;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=9:7852524-7852538;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.991;PctRecOverlap=0.994;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:48:0|1:52:0:3:45:./.:0:0:0:0:0/1:36:10:0/1:11:29:.:.:.
chr9	8219579	HG2_PB_SVrefine2Falcon2Bionano_4763	A	AAGATAGTAGGTACTGAGCACAGACACACTGGACCTAAGGGGTCAGTTTTCTGTCTTAGAAAACAGAGAGGTGAATGTCACCACTCAGCTTTTTGCATTTCACTACTCAAAGAGTGTAGCAGGCTCCATCGTGGGACCCGTTGCTTTGGGTTTTTT	20	PASS	ClusterIDs=HG2_PB_pbsv_10078:HG4_PB_SVrefine2Falcon1Dovetail_6193:HG3_Ill_SVrefine2DISCOVARDovetail_7477:HG2_10X_SVrefine210Xhap12_7201:HG2_PB_HySA_18148:HG4_PB_assemblyticsfalcon_26875:HG4_Ill_manta_2452:HG4_Ill_MetaSV_5509:HG4_Ill_GATKHCSBGrefine_6965:HG3_PB_assemblyticsfalcon_27362:HG3_PB_SVrefine2PBcRDovetail_4631:HG3_Ill_manta_2348:HG3_Ill_Spiral_10609:HG3_Ill_MetaSV_5469:HG3_Ill_GATKHCSBGrefine_6733:HG3_Ill_250bpfermikitraw_13196:HG3_Ill_150bpfermikitraw_12782:HG2_PB_SVrefine2Falcon2Bionano_4763:HG2_Ill_manta_2877:HG2_Ill_SpiralSDKrefine_17559:HG2_Ill_SVrefine2DISCOVARplusDovetail_13375:HG2_Ill_MetaSV_5281:HG2_Ill_GATKHCSBGrefine_6832:HG3_PB_pbsv_9808:HG4_PB_pbsv_10099;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6832:HG2_Ill_MetaSV_5281:HG2_Ill_SVrefine2DISCOVARplusDovetail_13375:HG2_Ill_SpiralSDKrefine_17559:HG2_Ill_manta_2877:HG2_PB_SVrefine2Falcon2Bionano_4763:HG3_Ill_150bpfermikitraw_12782:HG3_Ill_250bpfermikitraw_13196:HG3_Ill_GATKHCSBGrefine_6733:HG3_Ill_MetaSV_5469:HG3_Ill_Spiral_10609:HG3_Ill_manta_2348:HG3_PB_SVrefine2PBcRDovetail_4631;NumExactMatchSVs=13;ClusterMaxShiftDist=0.169935;ClusterMaxSizeDiff=0.169935;ClusterMaxEditDist=0.263158;PBcalls=9;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=155;DistBack=7411;DistForward=21132;DistMin=7411;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=9:8219580-8219579;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5577.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:0|1:32:2:2:33:./.:0:0:0:0:0/1:30:15:./.:.:.:.:.:.
chr9	8929919	HG2_PB_SVrefine2PBcRplusDovetail_11443	A	ATATGTGTATATATGTATATATGTGTATATATGTGTATATATATGTGTATATACATGTGTGTGTGTATATATATGTGCGTGTATATATATATGTGTATATATATGTGTGTG	20	PASS	ClusterIDs=HG2_PB_pbsv_10081:HG4_PB_SVrefine2PBcRDovetail_5051:HG2_PB_assemblyticsfalcon_27426:HG4_PB_assemblyticsfalcon_26878:HG2_PB_SVrefine2Falcon1plusDovetail_12239:HG2_PB_SVrefine2PB10Xhap12_7360:HG4_PB_SVrefine2Falcon1Dovetail_6194:HG4_Ill_SVrefine2DISCOVARDovetail_7260:HG2_PB_SVrefine2PBcRplusDovetail_11443:HG2_PB_HySA_18153;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_11443:HG4_Ill_SVrefine2DISCOVARDovetail_7260;NumExactMatchSVs=2;ClusterMaxShiftDist=0.176471;ClusterMaxSizeDiff=0.176471;ClusterMaxEditDist=0.253659;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=110;DistBack=69;DistForward=35;DistMin=35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=286;REFWIDENED=9:8929682-8929967;PctSeqSimilarity=0.9474;PctSizeSimilarity=0.9455;PctRecOverlap=0.2342;SizeDiff=6;StartDistance=82;EndDistance=82;GTMatch=1;TruScore=70;MatchId=5578.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:0:6:2:20:./.:0:0:0:0:1/1:1:30:./.:.:.:.:.:.
chr9	9008027	HG2_PB_PB10Xdip_31715	C	TCATCATTTAGCATTAGGTATATCTCCTAATGCTATCCCTCCCCCCTCCCCCCACCCCACAACAGTCCCCAGAGTGTGATGTTCCCCTTCCGGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGGTTTTTTGTCCTTGAGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAACCATTCTCATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGTCATTTATGGATTCAATGCCATCCCCATCAAGCTACTAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATGTAGATCAGTTGTTTCTTATGAAAGATTAGACGGGAAGTGATTTAAAAAATACTTTGCCTGTCTGAAATTATCTGATTATCCCTTCATGCTTTACTGACAGTTTGGATGAATATAGAATTCTAAGTTGAAAATTCTTTTTCCCCTAGAACTTTGGAGGTTTCTCTTTTCTAGCATGCAGGTATTCAACGCTGTTTTGAGAACTACAATGTCATTCTTATTCTCATCTCCTAGTGTATGACCTGGGATTACCACTGCCCTCCCTGCTGTCTACACCCCTTGGGTTTAGAATATTTAGCTTGGTTATTCTATAATTTTACCATGACATGCTTCACAGTAGAGGTCTTTTAAAAAATCCATATGTTGAGAAAACATTGGATACTTTCAACTTGGTGAATCATGTCCTTCAGTTCTAGGAAGATTTTCTCTTGTTATATCTGTGTTATTTTCATTCCTTAGATTTTTTTAAAGTGTCTCTTTCTCCTGTCTTTTTTAAATAAGTCATTTTTAGTGAGATATTGGATATCTTGGATTAATTCTTTCACTTAAAAAATTTTTTCTTATTATCACTTTGTCTTTTTGTTCTGTTTTTTATGTTTTTTCAACTTTATCCTTCATCCCTCCTCTTGCATTTTGTCTATCTGCTATAATATTTTAAATATCCAGGATCTTTATATTTTCTCTGCATATTCTATTTTTGAAATAACATCTTGTTGTAATTTCATAAATCTAATATTTTAAAATTCTCTCTGATTTGTATCTTTTTTGTTTCATTTTTTTTTTTTTTTTGTAACTGTTCCTTATACGTCTGGTCATCCTTGACTATCTGAGTTGTGCTATAAGAAGCTCTATGGGCAGTCCTGTGTCAGTATGTGTGCAGTGGAGGTGCTAGTTGGTTCAGGAGCTTCATAACAGGATGATAGGGTGATTGGATAATGGGATAGCTGTATTTTGGAATGCCAACCTCCACATATCATTATATGTGGGTATTTTCTCAAGCACCATTATGTTTCTCCAAAGCAGAATACTTCAATTTTAGTCTTTGTTCTCGTACCCTGGAAGTAGGAAGTTTGTGTCTAGGAAAGATAGATCTGAGTCCCTTTTCTCATAATTTCTTACTAGTGCCTCACTTCAGCACTCCTTTCTTTTGATATTCTTGATTTTTAGTTCAATTTCTCTGAAGTTTTACACCTCTAATCTCTTGTAAGAATGGGGGAAAGGTGGTCTTATAGCTATATATGAACATGGAAAGCGATTTGGTGACCTAAACTTATCTTAGAGACTTTCAAACAATCCCCCTATTTTCAGTGTGAAGACCTTTTTTTTTTTTTTTTTTTAAGTTCTGTATACTGGTACATCCAAGTCCTGAGCCTTTCCAGGTTTTCAGAGGGGTGGGGGTGAACTGGCACATTTGTCACTGTCATCTAAGCTGTTGGCACATGATCTTCAGATTTTGCCATTTTGCCAACTCATCTACTTTCCATCTTCCAAAACTTTGTTGACATCTCTTAACCAATTTTACCTTTTCCTGTTCAATGTGTCTTTGTACTATTGTGTTTTAAAAATTTCTTAACTGCTATTTTAGAAGTGTTTTTGAAGGCAGCAGAGATACACTCTGAGTTCCATATGCCAGGTTTTTCCTGAAGACTAGGCTATATTTAAACACATGTTGATCATGAGATTTGTGTTAATATGAAAGTTGGTCTTATAATTAACTTCTAATATCAGAGTTCCACCAGACAAAAATGTTTCTTAATACATACATAATATAAGGTGGGATTCAACTTGAATGAGACCCTGAAGAATAAAAGATGGTATGGTTTTACTGGCGATATGCTATTAGGTTTGGGGCTGGGAATTAGATAGTATGAAAGCTGAACTTCTAGGAAATGATGACTTCATCTCCACCAACTGAAAGAAACATTTCCACAAATCATGTTATTTAATATTTCTTGTTTGAAAAAAGTATATAAAATAATATTTATACTAATACGTAAATGGCCAAAAAATTTACAAGAAAAATTTATAAGAATAAACCTCTGGTTGAAGCTTCTTTTTTCCCAACTACCTAAGTTTTATTTGTTTTCTTTTAAAACAGTTATTTAAAAACATTTATTTTATTTACACCATATATTTTCTTTGAAATATTTTATCACATATATTAAACTACGTATTCTCCCACAGTGGGGAAATGTGCTGAAAGTATCCTACGTCCTTGTGTGTACAGATGTGTGTTGTGTGTGTACAGTATGTATTATACATATGTAAACGTATGTTTTTGCCCTGCTCTCATTTAGGATGTTGTTGGATAAAGAGGACACCAAATTAACTTAAAATACATGTCTATTGGACTATTCCTTTGAGAGCACAGCATTATCATTGAGAAGTGGAAAATATAACAAATCTACAATGAGCATGTGGCATGCATAAGGATGGTTATGGTTCCATTTTGACATAATCTGGCTACAATAATAATGTTAAATCAATATGGCTTTTATGTTCTTGGTACTAATTGTATTTCCAACAATTGCAAACTATAAGTTATAACTGAATTGGCAAAAAGATGGTAATTCTTGTCTCTGTGACAGAAATGAAGCACGATTTTGCATTCAGGGACTATGTCTTTCTGTGACTAAAACAGAAATCAACTACAAAACTCCTGAAACCTACAAAACTATTGAAAGTTAGAGATAAGACCAGACAGTGATGTAATCTCTTTCATTTCAAACTAGAAACAAAAAGATACACATCTCATCAATTGACCCAAATGTTCACCCATTTTCTCACATACACCAATGTGATTATGATAAGAATTATTAGGTTGATTCATTTTGCTTGATAAAGTGTCAATAAATTCTTGCAGCTGCATTGGAGAGGATCCTCCTAGACCTCTCAACCTTTATCTGTGGCACAATAAATTTATTCAAAAACACTTATTTGAGCATACTATCTACTAGATACTCCTCTGGTGATCCAAAGAAGAATTATTTTTTCTTTATTTTTATTTATTATTATCTTGAGACAGGCTCTTTGCTGTGTTGCCCATGTTGGAGTGCAGTGTTACAAACATGGCTCACTGCAGCCTTCACTTCCTAGGCTCATACAATCCTCCCAACTCAGTCTCCAGTGTAGCTGGGACCACAGGTGTGTGCCATCACACCTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCCCAAAGAAGAATCAGGTGCAGTCCTTACCCTCAAATTGTTCTCTATGGTTTGGAAAGTATAGACATATAAACATATTATTATAATAGAGTAGAGTAAGAGCTATTAGAAGTTTATTTAGTATGCTGCAGGATTCACTGAATGAGATGCATATACAACTCATAGTACCATGAAATAATACAGACTTTGGGGCAGCAATATGACGAATTTCATAGTGCTAATACATACATAGATGCATAGAAGTTGGGATAAAGTACGTAGAGAGAGGAGGCTACAAACAGGAAGGAATCAATCCACAAAAAGCTTTGTTCTGTTTGAAAAGCTTGGCCCTAAGCAGGAATAAGACACTAAATAGTCTGCATTTTAGAATCGTCTTTCTAGCAGCATAAAAACTGTAGATAGGACTCAAGTGTTTGTTCTAGAACGACAAATCTATCCATTCAAACAAAGGGACCCAGTTATATAAGCACAGATGATCCTTTTCACAGAAGGACTGGAGAGACTCCCTTTGCTGGGGAAGCTGTTGTGCTCTTACTGACTTCTGGGTAAAATTTCTTACCTGAAGTCATGGGAGAGGACGTTAAATGTAATCACTTTAAACAATAGAAAACAAGTATCATTTTAAAA	10	PASS	ClusterIDs=HG3_PB_HySA_15056:HG2_PB_HySA_18156:HG3_PB_pbsv_9812:HG2_PB_PB10Xdip_31716:HG4_PB_pbsv_10104:HG2_PB_PB10Xdip_31715:HG3_PB_SVrefine2PBcRDovetail_4633:HG4_PB_SVrefine2Falcon1Dovetail_6195:HG2_PB_SVrefine2Falcon1plusDovetail_12240:HG2_PB_SVrefine2PBcRplusDovetail_11444:HG2_PB_SVrefine2PB10Xhap12_7361:HG2_PB_SVrefine2Falcon2Bionano_4765:HG4_PB_SVrefine2PBcRDovetail_5052;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_31715:HG2_PB_PB10Xdip_31716;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0522003;ClusterMaxSizeDiff=0.051998;ClusterMaxEditDist=0.202118;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=4828;DistBack=43836;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=9:9008028-9008026;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.999;PctRecOverlap=0.9992;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5579.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:90:1/1:0:39:0:25:./.:0:0:0:0:1/1:0:22:1/1:1:556:.:4432:.
chr9	10163173	HG4_Ill_GATKHCSBGrefine_6971	T	TTAAAAAATGATTTTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAATAAAAAAATAAAAAA	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_6838:HG4_PB_pbsv_10110:HG2_PB_pbsv_10087:HG4_PB_HySA_14636:HG2_PB_assemblyticsfalcon_27435:HG2_PB_HySA_18164:HG2_PB_SVrefine2Falcon1plusDovetail_12243:HG4_Ill_MetaSV_5514:HG4_Ill_GATKHCSBGrefine_6971:HG2_Ill_MetaSV_5287;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6838:HG4_Ill_MetaSV_5514:HG4_Ill_GATKHCSBGrefine_6971:HG2_Ill_MetaSV_5287;NumExactMatchSVs=4;ClusterMaxShiftDist=0.146204;ClusterMaxSizeDiff=0.146204;ClusterMaxEditDist=0.184423;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=528;DistBack=26609;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=9:10163174-10163189;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5580.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:25:0|1:41:1:0:17:./.:0:0:0:0:0/1:34:11:0/1:11:57:.:.:.
chr9	10798391	HG2_PB_PB10Xdip_30700	ATTT	CAGGAGATGTGCTAATTTGCTCAAACAATGAAACCACATCTGGGACTGCAGCTGCAACTGGAGTCACCATTTGGTTACGCTTACAGTAATCCACTGTCATTCTCCAAGATCCATCTGTCTTCTGCACAGGCCAAGTTGAAGCATTAAATGGTGATGTGGTGGGGGATCATCATCCCTGCATCTTTCAAGTCCTTCATGGTGGTACTAATCTGCAATCCCTCCAGGGTTCCAATATTGCTTAGGTTTACTACTTTTTTTAGGTAGAGGCAGGTCTAATGGCTTCCATTTGTCCTTTCCCACCATAATAGCCCTCACCTCACAGGTCAAGGAAAAAATGTGGCATTCTGCCAGATGCTAAGTGTGTATATTCCAATTATTCATTCTGGCACTGGGAAAATAACCATAGCATAGATCTGGGGACACACTGTAAGTTGGACCAGAGTTAAAACAACTGTAATTATCTCAACTCCATAAGCCCCTACTCTAACTGGAAGGTCACAATGACACTTTGGGTCGCCTGTTATCAATGCCAGTTCAGAGTCAGGGTCCAGTAGTCCCTGAAAGGTCTGATTATTTCCCATTCTCTAAGCACGTTTACCATGATAAAAGGCTGGAGGAAGAATGGGGGAAAGGTTAACAGTATAAATTGTTGTTAGTATAAAGGATTCCTTCCTCAAGGAGACCTGGCCTCTCCTTTATTCAAGGCCTTCTGGTTCTGCATCCTGGTTCTGCAAACTGGCTCAAGTCTGGAAATCGATTGAGGAGCCATAAGATTCTGGTTTTATAATTCAAATTAGACTTTTGTTTACTTGCCCTGGAAGTTTCCTGCTTATACAGTTCAAGTAAGAATATAGTAGGCTTCCTATCTACTTCGCTTCTAGGAACACAGTGATTAATTAGCCACTGCCACAGTTTTACATGAATCAGACTATTTTGCTTGTTGCTTTGTCTCTGCTGTCCATTTCAGTAACTACACCCATCTTGCCTTTGACAGCTGAGTGCCTCCACCTGGCCCCTGCCACCTTAGGATCCAATTATTCTCATTTCGTTTAAGTTTCTCCGTTGAGTGCACTTCCCACTGTAAGATGTAGCATACAGAGAAGAGCAATCACAGAGTTCTTTAAGGATGCCGTTGCTCCCCTCACAAATCTATTTCACAAGGTATTGGTGAAGGGTATGTCTTCTGGACTCTCCAAGTTGGAGTGAGTAAGTCTAAAATGACAAACGGACTCAGGCATTCCAGTCTCCCTGTGACTTCAGGTCCCTTCTTCTACATTAAACCCAGGGAGATCAGCCATTTTCAGTTCACTCACAGTGGGTAATTTTTTTTTATCTATCTAATGCACAACTCTCTAAACAATTCACACCAAAGACTATCAATGCTCTCCATACTATTATAAGTAAAGTCCTTAGCATTTTTAGGTATAATCAGACTACAGAGTCAATTTCAGAAACCCCAAAACTAACTTAAAAAGTTAAGCCTTAAAATTCTGTCCCTCTAGAACCACACACCTGGTACCAAAATATGTAGTAGTCAGGATTCTCCAGAGGGAGAATATATATGAAATATATATACATATATATATATATATATATATATATATATATATATGTATATATATGAGTTTATTAGGGAGAATTGGCTTATATATATATATACATATATATATACATATATATGTATATATATATATAAATAATGGAGTTTATTAGGGAGAATTGGCTCACATGATTACAAAGGGAAGTCCTACAATAGGCCACCTGCAAGCTGGGGAAAGAGAGAAGCTAGCAGCATAGCTCTGTACAAGTCCAAAAGCCTCAAAAGCAGGGAAGCTGACAGTAGAACTCTCAGTCTGAGGCAGAAGGCCCAAGAGCCCCTGAGAGGCCACTGATGCAAGTCCCAGAGTCCAAAGACTGAAGAACCTGGAGTCTGAAGTTCAAGGGCATGAGGAGAAAAAGCAAGCGTCTGGCATGGGAAGAGAGACAGCCAGAAGACTGAACAAGCAAGCCTATTTTCTCTTCTTCCTGCTTTGTTCCAGCTGCACTGGCAGTTAACTGGATGGTGTCCATCCACATGGAGGGTAGGTCTTCCTCTCCCAGTCCACTGACTCAAACGTCAGTCTCCTCTGGCAACATCCTCACAGAAACTCCCAGAAACAATACTTCACTTGCCAACTAGGCAGCCCTCAATCCAGTCAAGTTGACACTTAATGATAACTATTATAACCTCTTTATTAAGTTTATTTCTAACAATTTTATTATTTTTGATGATTTTGTAAATAGGACTGTTTTCCTAAAACCTTTTTAGGTAGTTCATTGTTAGTGTATAGAAATGCAACTGATTTTTATATGTTGATTTTGTATTCTGCAACTGTATTGAATATTTCTATTGGTTTTAACAGGTTTTTATTTTAAGTCTTTAGGACTTTCTATTCATAAGATTATGTCATCTACAAACAGACAGTTTTACTTCTTCCTCTCTGATACGGATGCATTTTAAAAATTTTTTAACATAATTGTTCTGGTAGTTGGATAGAATTGCTAAGCATGGGCATTTTTGTCTTCTCTTGATTTTACAGGAAATGCATTCAGTTTTTTACGATTGATAATGATGTTAGCTTTTCATATACAACTTTACTATGTTGAAGTAACTTCCCTCTAGTTTTTAATTTACCATGAAATTATGTATATTTTTTGCATTTATTAGAAGATATGATTTTTATTCTTCATTCTGTTAACATGGTATGTCACATTAATTTTTTTTATGTGAAGAACTATCCCTGCATGCTGAAGATTAATCACACTTGGTCATGGTGTATGATCATTTTAATGCACTGTTGATTTTGATTTGCTGGAATTTTATTTTGTTGAATATTTTTGCAAGTATTTTCTTCAGATTTATTAGCCTGTAGTTTTCTTTTCTTGTGATGTCTGTGTTTAAATTTGGTATCAGGGTAATGCTGGCTTCAAAAAAGAAGTTTGGAAGTGTTCTCTTCAATTTGTTGCAAGAGTTGGTATTAATTCTTCTTTTGATGTTTGGTAGACTTTACTAGTAAAGCAGTCTTTCTATAGGCTTTTTATTTGGGGGGAAGTGTTTATTTGATTACTGTTTCAATCTCCTTAGTAGTTACAGATCTATTCAGATTTTTTTTTTATAATTCAGTCTTGGCAGCTTGTATGTTTCTAAGAATTGATCCATTACTTCCAGATTATTCAGTTTCTTTGTGTATTCATAGTAGTCTCTTACGATA	20	PASS	ClusterIDs=HG4_PB_HySA_14644:HG4_PB_pbsv_10113:HG2_PB_assemblyticsfalcon_27441:HG2_PB_SVrefine2Falcon1plusDovetail_12246:HG2_PB_assemblyticsPBcR_26709:HG2_PB_SVrefine2PBcRplusDovetail_11449:HG2_PB_SVrefine2Falcon2Bionano_4770:HG4_Ill_SVrefine2DISCOVARDovetail_7271:HG2_PB_SVrefine2PB10Xhap12_7368:HG2_PB_PB10Xdip_30700:HG2_10X_SVrefine210Xhap12_7209:HG4_PB_SVrefine2PBcRDovetail_5057:HG4_PB_assemblyticsfalcon_26895:HG4_PB_SVrefine2Falcon1Dovetail_6200:HG3_PB_assemblyticsfalcon_27382:HG3_PB_SVrefine2Falcon1Dovetail_6162;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7209:HG2_PB_PB10Xdip_30700:HG2_PB_SVrefine2PB10Xhap12_7368:HG4_Ill_SVrefine2DISCOVARDovetail_7271;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0431894;ClusterMaxSizeDiff=0.0431894;ClusterMaxEditDist=0.0845666;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=3247;DistBack=63331;DistForward=29029;DistMin=29029;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=9:10798395-10798390;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9997;PctRecOverlap=0.9991;SizeDiff=-1;StartDistance=1;EndDistance=4;GTMatch=0;TruScore=99;MatchId=5581.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:43:0|1:34:0:0:22:./.:0:0:0:0:0/1:26:14:0/1:97:213:.:2965:.
chr9	13424321	HG2_10X_SVrefine210Xhap12_7218	A	AAAGGCCAATAAAGTGGCAACACTTCCTGCCCTTCATCTAGGGTTTTCTTTTTTTTTTAATGCATGGGGAAAAAAATGAAATGTTCTCCAGGTTTGCCACTACACTTTCTTTCTTGTGCTGCCTCACTTCCAGTGACGTTTATTATGGCATTAAAATATTTCCCAGGCATTATTGCCACTTCCATCCAGTGACAGAATTTTAAAGGAGGTGTATGGTGGAGTAAATATGCAAATAGAGAACTAAGGAATATCTGAGTTCTAGGAACTCCCACCCCCACAAAGATGCACAGCCTCTCACAGTATACAAAGACTTGCACAGAAATCCCAACAGGATTCTTTTCACAAAGTAAATAATTTCCAGTCCTATCACTGCATAAAATCCCATGTTGGAGTGCACAGTTCAGAGTTACTGTCATCACTTTTGTAGCTCTTTGCAGCTGAGAGATTGTTTTAATTATAAAAAGGAGTTCAATTCAGGCGAACCAAGAGAAATGAGGATGCCATTGGATAATAAGCCTAGATTTTAATAGGCACCCATTGATTTTGAGGTCTTGATTTTCTGCTCACTGATCTTCAGAACGAACATGTGAACCTACTGGAGACATTTTGAAGGAAAAGTGGTTTGGAGTAACTTCTAGAAGATGTCTAACATCCCTGTGATACTAAGATTTTATAGTAATTACTACCGTTTTCCAAATACCTATTATGCGCTGGATTTCCATGTATTCATTTAACAGATAATTATTAGGTATCTACTCTTTGCCAGGCATTGAGGATACAATGCTGAAGAGAACAGACACGCTTTGCCCTTAGGTGTCTCATAGTCTAGCAGAGAAATGGTCAATCAAATAAAATTAAATCTAAGTGCCACAGTGCAGGAGAAGTATATGGTGGTGATAAGGGCGCGGGGCAAGGAAGTGCTGGGTAGAGAAGGGCGGGTCCCTGGGTAGGGCTCCACCCAGGGGCCTGTGCCCACCGACCTAGGTGAGGACTGGCATTTCTGTTTTCCTGCTCAGATGTTGCATTTCCCAAGATCTCTGTGGCCTGTCACGCCCCCATCCCGTGCCTATAAAAACCTGGAGACCCTGGCGCGCATGCACGCAAGCGGCCGGACGTTGAGAGGAACACATCGGTTGAAGAAGACTCGAGCAGCTGGACGTTGAGAGGAATGCACGGGCATAAGAGCACACCGACAGAAGTCGGCAGGCCGGCAGGCCAACGACCCACAGAACAACGTGGAGTTTGGCCGGGGCGGTCCAAGGACAGCCTGGCTGCCGAGCAGCCCGATTCCAGGGGAAAACCAACTTCCCACTCCATCTCCCTTCTGGCTCCCCCATCTGCTGAGAGCTACTTCCACTAAATAAAACCTTGCACTCACTCTCCAAGCCCACTTGTGATCCGATGCTTCCGGTACACC	20	PASS	ClusterIDs=HG2_PB_pbsv_10098:HG4_PB_HySA_14663:HG3_PB_assemblyticsfalcon_27402:HG3_PB_SVrefine2Falcon1Dovetail_6164:HG4_PB_pbsv_10118:HG2_PB_assemblyticsfalcon_27462:HG4_PB_assemblyticsfalcon_26910:HG2_PB_PB10Xdip_30824:HG2_PB_SVrefine2PB10Xhap12_7375:HG2_Ill_breakscan11_4042:HG2_PB_SVrefine2Falcon1plusDovetail_12251:HG4_Ill_GATKHCSBGrefine_6979:HG2_Ill_SVrefine2DISCOVARplusDovetail_13407:HG2_Ill_GATKHCSBGrefine_6847:HG2_10X_SVrefine210Xhap12_7218:HG4_PB_SVrefine2PBcRDovetail_5061:HG2_PB_SVrefine2PBcRplusDovetail_11453:HG2_PB_SVrefine2Falcon2Bionano_4776:HG4_PB_SVrefine2Falcon1Dovetail_6203:HG2_PB_HySA_18193;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7218:HG2_Ill_GATKHCSBGrefine_6847:HG2_Ill_SVrefine2DISCOVARplusDovetail_13407:HG4_Ill_GATKHCSBGrefine_6979;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0456461;ClusterMaxSizeDiff=0.0449438;ClusterMaxEditDist=0.140097;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=1416;DistBack=6976;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=9:13424322-13424326;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5582.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:0|1:41:1:0:27:./.:0:0:0:0:0/1:24:13:0/1:51:106:.:1372:.
chr9	14010702	HG2_Ill_250bpfermikitraw_13637	T	TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG4_PB_pbsv_10121:HG3_PB_HySA_15098:HG2_PB_assemblyticsfalcon_27465:HG2_PB_SVrefine2PB10Xhap12_7377:HG3_Ill_SVrefine2DISCOVARDovetail_7510:HG3_PB_SVrefine2PBcRDovetail_4644:HG2_PB_SVrefine2PBcRplusDovetail_11455:HG3_PB_assemblyticsfalcon_27405:HG2_PB_PB10Xdip_30912:HG2_PB_PB10Xdip_30913:HG3_PB_pbsv_9830:HG4_Ill_GATKHCSBGrefine_6980:HG2_Ill_250bpfermikitraw_13637:HG2_PB_HySA_18195;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13637:HG4_Ill_GATKHCSBGrefine_6980;NumExactMatchSVs=2;ClusterMaxShiftDist=0.320442;ClusterMaxSizeDiff=0.320442;ClusterMaxEditDist=0.331492;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=80;DistBack=7;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=174;REFWIDENED=9:14010583-14010756;PctSeqSimilarity=0.9529;PctSizeSimilarity=0.9091;PctRecOverlap=0.9101;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=5583.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:38:./.:0:0:0:0:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr9	14205240	HG2_10X_SVrefine210Xhap12_7219	A	AAGGGAGGAAGGAAGGGGGAAGGAAGGAGGGAGGGAGGGAGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGGAGGAAATGAAGGGAGGGAAAGGAGGGTGAGAGGGAGGGAGGGAAGGAAGGGAGGGAGGGAGGGGAGGAAATGAAGGGAGGAAAAGGAGAAAATGAAAGGAAGGGAAGGGAAGGAAGGGAGAGAGGAAGGGAGGGAGGAAAGGAAGGAGAGGAGGGAGGGAAAGCAGGGAAGGAAGGAAGAAAGGGAGGGAGAG	20	PASS	ClusterIDs=HG2_PB_pbsv_10101:HG2_PB_HySA_18197:HG3_PB_pbsv_9831:HG3_PB_HySA_15100:HG4_PB_HySA_14667:HG2_Ill_MetaSV_5294:HG4_PB_SVrefine2PBcRDovetail_5062:HG3_PB_assemblyticsfalcon_27406:HG3_Ill_SVrefine2DISCOVARDovetail_7512:HG2_PB_SVrefine2Falcon2Bionano_4778:HG2_10X_SVrefine210Xhap12_7219:HG4_Ill_SVrefine2DISCOVARDovetail_7288:HG2_PB_SVrefine2PBcRplusDovetail_11456:HG2_PB_SVrefine2Falcon1plusDovetail_12253:HG3_PB_SVrefine2PBcRDovetail_4645:HG2_PB_SVrefine2PB10Xhap12_7378:HG4_PB_SVrefine2Falcon1Dovetail_6204;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7219:HG2_PB_SVrefine2Falcon2Bionano_4778:HG3_Ill_SVrefine2DISCOVARDovetail_7512;NumExactMatchSVs=3;ClusterMaxShiftDist=0.164154;ClusterMaxSizeDiff=0.156928;ClusterMaxEditDist=0.283761;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=281;DistBack=-59;DistForward=-1;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=59;REFWIDENED=9:14205241-14205299;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9929;PctRecOverlap=0.9435;SizeDiff=-2;StartDistance=-15;EndDistance=-15;GTMatch=1;TruScore=97;MatchId=5584.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:0:23:0:22:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr9	15234393	HG3_Ill_SVrefine2DISCOVARDovetail_7517	A	AGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCAGCCGCCCCGTCTG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_13650:HG2_PB_assemblyticsfalcon_27477:HG4_PB_pbsv_10125:HG2_PB_SVrefine2Falcon1plusDovetail_12254:HG3_PB_pbsv_9835:HG2_PB_HySA_18217:HG3_PB_HySA_15111:HG4_Ill_SVrefine2DISCOVARDovetail_7295:HG3_Ill_SVrefine2DISCOVARDovetail_7517:HG3_Ill_GATKHCSBGrefine_6748:HG2_Ill_GATKHCSBGrefine_6851;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13650:HG4_Ill_SVrefine2DISCOVARDovetail_7295:HG3_Ill_SVrefine2DISCOVARDovetail_7517:HG3_Ill_GATKHCSBGrefine_6748:HG2_Ill_GATKHCSBGrefine_6851;NumExactMatchSVs=5;ClusterMaxShiftDist=0.180791;ClusterMaxSizeDiff=0.169492;ClusterMaxEditDist=0.213018;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=90;DistBack=7476;DistForward=45;DistMin=45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=218;REFWIDENED=9:15234235-15234452;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5586.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:40:0|1:31:3:2:43:./.:0:0:0:0:0/1:16:15:./.:.:.:.:.:.
chr9	15365254	HG2_PB_SVrefine2Falcon2Bionano_4779	G	GACAGAGTGCTGACTGGTGTGTTTACAATCCTTTAGCTAGACAGAAAAGTTCTCCAAGTCCCCACCGATTAGCTAGGCACAGAGTGCTGACTGGTGCATTTACAAACCTTTAGCTAGACGCAGAGTGCTGACTGGTGCATTTACAAACCTTTAGCTAGACAGAAAAGTTCTCCAAGTCCCCACCCGATTAGCTAGGCACAGAGCGCTCATTGGTGCATTTACAATCCTTTAGCTAGACAGAAAAGTTCTCCAAGTCCCCACCCGATTAGCTAGGCACACAGTGCTGATTGGTGATTTACAAACCTTTAGCTAGACACAGAGTGCTGATTGGTGCGTTTACAAACCTTTAGCTAGACAGAAAAGTTCTCCAAGTCCCCACCCAATTAGCTAGAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7222:HG2_PB_pbsv_10105:HG4_PB_pbsv_10126:HG4_Ill_250bpfermikitraw_13538:HG2_PB_HySA_18219:HG2_PB_HySA_18218:HG4_PB_HySA_14683:HG3_PB_pbsv_9836:HG4_PB_SVrefine2PBcRDovetail_5064:HG4_Ill_SVrefine2DISCOVARDovetail_7296:HG3_PB_SVrefine2PBcRDovetail_4647:HG2_Ill_SVrefine2DISCOVARplusDovetail_13415:HG4_PB_SVrefine2Falcon1Dovetail_6207:HG2_PB_SVrefine2PBcRplusDovetail_11460:HG3_Ill_SVrefine2DISCOVARDovetail_7518:HG2_PB_SVrefine2PB10Xhap12_7383:HG2_PB_SVrefine2Falcon2Bionano_4779:HG2_PB_SVrefine2Falcon1plusDovetail_12255;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7222:HG3_Ill_SVrefine2DISCOVARDovetail_7518:HG2_PB_SVrefine2PB10Xhap12_7383:HG2_PB_SVrefine2Falcon2Bionano_4779:HG2_PB_SVrefine2Falcon1plusDovetail_12255;NumExactMatchSVs=5;ClusterMaxShiftDist=0.057072;ClusterMaxSizeDiff=0.0545906;ClusterMaxEditDist=0.248756;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=392;DistBack=97282;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=263;REFWIDENED=9:15365255-15365517;PctSeqSimilarity=0.9805;PctSizeSimilarity=1;PctRecOverlap=0.4987;SizeDiff=0;StartDistance=-197;EndDistance=-197;GTMatch=0;TruScore=82;MatchId=5587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:2:15:1:24:./.:0:0:0:0:0/1:2:17:1/1:3:72:.:.:.
chr9	15767828	HG2_PB_SVrefine2PB10Xhap12_7387	T	TCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCCTTCCTTCCCTTCCCCTTCCCTTCCCCTTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCCCCCCCCTCCCCTCCCCTCCCCTTCCCTTC	20	PASS	ClusterIDs=HG4_PB_pbsv_10129:HG2_PB_PB10Xdip_31133:HG2_PB_HySA_18225:HG2_PB_PB10Xdip_31134:HG2_PB_SVrefine2Falcon1plusDovetail_12258:HG2_PB_SVrefine2PB10Xhap12_7387:HG2_PB_SVrefine2PBcRplusDovetail_11463:HG3_Ill_SVrefine2DISCOVARDovetail_7521:HG2_PB_assemblyticsfalcon_27486:HG4_PB_assemblyticsfalcon_26928:HG3_PB_assemblyticsfalcon_27418:HG3_PB_HySA_15120:HG4_PB_HySA_14688:HG4_PB_SVrefine2PBcRDovetail_5067:HG3_PB_HySA_15119:HG3_PB_pbsv_9841:HG2_PB_HySA_18224:HG4_PB_SVrefine2Falcon1Dovetail_6210:HG3_PB_SVrefine2PBcRDovetail_4650:HG2_PB_SVrefine2Falcon2Bionano_4782:HG2_PB_SVrefine2PB10Xhap12_7386;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7387;NumExactMatchSVs=1;ClusterMaxShiftDist=0.383838;ClusterMaxSizeDiff=0.383838;ClusterMaxEditDist=0.383838;PBcalls=20;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=145;DistBack=-1;DistForward=12;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=9:15767823-15767842;PctSeqSimilarity=0.9507;PctSizeSimilarity=0.9448;PctRecOverlap=0.9448;SizeDiff=8;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=94;MatchId=5588.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:37:1/1:1:28:1:11:./.:0:0:0:0:1/1:0:11:./.:.:.:.:.:.
chr9	15984098	HG4_Ill_SVrefine2DISCOVARDovetail_7299	A	ATAGAGCCCAGGTGGGCAACAAGATAAGAAAGAAGGTAAAGCCACTGAAGCCATGGACCCTGGACCAAATGTGAGGTCTGACAGATAATC	20	PASS	ClusterIDs=HG2_Ill_Krunchall_13968:HG2_PB_assemblyticsfalcon_27488:HG4_PB_pbsv_10132:HG2_PB_HySA_18229:HG2_PB_PB10Xdip_31138:HG4_PB_HySA_14690:HG2_PB_pbsv_10113:HG4_PB_SVrefine2PBcRDovetail_5069:HG4_Ill_SVrefine2DISCOVARDovetail_7299:HG4_Ill_GATKHC_16335:HG2_PB_SVrefine2Falcon1plusDovetail_12260:HG4_Ill_GATKHCSBGrefine_6988:HG2_Ill_GATKHCSBGrefine_6855:HG4_Ill_250bpfermikitraw_13541:HG4_Ill_150bpfermikitraw_12970;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12260:HG4_Ill_GATKHC_16335:HG4_Ill_SVrefine2DISCOVARDovetail_7299:HG4_PB_SVrefine2PBcRDovetail_5069;NumExactMatchSVs=4;ClusterMaxShiftDist=0.228916;ClusterMaxSizeDiff=0.211765;ClusterMaxEditDist=0.313253;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=89;DistBack=25171;DistForward=37;DistMin=37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=101;REFWIDENED=9:15984095-15984195;PctSeqSimilarity=0.9894;PctSizeSimilarity=1;PctRecOverlap=0.9551;SizeDiff=0;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=98;MatchId=5589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:34:0|1:33:4:2:30:./.:0:0:0:0:0/1:17:13:./.:.:.:.:.:.
chr9	17554040	HG2_PB_SVrefine2Falcon2Bionano_4786	C	CCTCCCCTCCCCTCCCTTCTCCTCCCCTCCCTCCCTTCTCCTCCCCTCCCCTCCCCTCACTTCCCCTCACTTCCCTCTCCCCTCCCCTTCTCTCTCTCCTCTCTCTCTTTCTCTTTTTCTTTCTTTTCTTTCCTTT	10	PASS	ClusterIDs=HG4_PB_pbsv_10143:HG2_PB_PB10Xdip_31142:HG4_PB_assemblyticsfalcon_26942:HG3_PB_assemblyticsfalcon_27429:HG2_PB_assemblyticsfalcon_27499:HG2_PB_HySA_18242:HG2_PB_SVrefine2PBcRplusDovetail_11468:HG2_PB_SVrefine2PB10Xhap12_7394:HG2_PB_SVrefine2Falcon2Bionano_4786:HG3_PB_SVrefine2PBcRDovetail_4657:HG4_PB_SVrefine2Falcon1Dovetail_6215:HG4_PB_SVrefine2PBcRDovetail_5075:HG2_PB_SVrefine2Falcon1plusDovetail_12263:HG4_PB_HySA_14708:HG3_PB_HySA_15141:HG2_PB_pbsv_10117;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4786:HG2_PB_SVrefine2PB10Xhap12_7394;NumExactMatchSVs=2;ClusterMaxShiftDist=0.114943;ClusterMaxSizeDiff=0.114943;ClusterMaxEditDist=0.232558;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=135;DistBack=38;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=9:17554041-17554042;PctSeqSimilarity=0.9926;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=5590.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:3:25:1/1:0:22:1:4:./.:0:0:0:0:0/1:1:7:./.:.:.:.:.:.
chr9	17874425	HG2_PB_assemblyticsfalcon_27502	AACTAATACAGTTTT	TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6217:HG3_PB_pbsv_9852:HG2_PB_HySA_18249:HG2_PB_PB10Xdip_31144:HG4_PB_pbsv_10145:HG2_PB_HySA_18248:HG2_PB_HySA_18247:HG2_PB_pbsv_10119:HG2_Ill_breakscan11_4043:HG4_PB_HySA_14712:HG2_PB_assemblyticsfalcon_27502:HG3_PB_assemblyticsfalcon_27432:HG4_PB_assemblyticsfalcon_26945:HG2_Ill_MetaSV_5301:HG2_PB_SVrefine2Falcon2Bionano_4788:HG2_PB_HySA_18246:HG4_Ill_MetaSV_5530:HG2_PB_SVrefine2Falcon1plusDovetail_12265:HG2_PB_SVrefine2PB10Xhap12_7396;NumClusterSVs=19;ExactMatchIDs=HG2_PB_assemblyticsfalcon_27502;NumExactMatchSVs=1;ClusterMaxShiftDist=0.171875;ClusterMaxSizeDiff=0.16875;ClusterMaxEditDist=0.259375;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=301;DistBack=30609;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=9:17874440-17874424;PctSeqSimilarity=0.9752;PctSizeSimilarity=0.9149;PctRecOverlap=0.9574;SizeDiff=-28;StartDistance=0;EndDistance=14;GTMatch=0;TruScore=94;MatchId=5591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:15:47:0|1:23:2:1:40:./.:0:0:0:0:0/1:32:15:0/1:18:50:.:.:.
chr9	18400142	HG2_Ill_Krunchall_13989	G	GTTATGACATATATTTTCTGTGACAGAGAAATAACATATTTTTGTTTAAAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4044:HG4_PB_pbsv_10148:HG2_PB_pbsv_10122:HG4_Ill_svaba_12779:HG4_Ill_scalpel_9398:HG4_Ill_Krunchall_14223:HG4_Ill_GATKHC_16363:HG4_Ill_GATKHCSBGrefine_6999:HG4_Ill_FB_8832:HG4_Ill_250bpfermikitraw_13568:HG4_Ill_150bpfermikitraw_12995:HG2_Ill_svaba_12696:HG2_Ill_scalpel_9661:HG2_Ill_SpiralSDKrefine_17619:HG2_Ill_SVrefine2DISCOVARplusDovetail_13426:HG2_Ill_Krunchall_13989:HG2_Ill_GATKHC_16344:HG2_Ill_GATKHCSBGrefine_6860:HG2_Ill_FB_8862:HG2_Ill_250bpfermikitraw_13675:HG2_Ill_150bpfermikitraw_12835:HG2_10X_SVrefine210Xhap12_7234;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7234:HG2_Ill_150bpfermikitraw_12835:HG2_Ill_250bpfermikitraw_13675:HG2_Ill_FB_8862:HG2_Ill_GATKHCSBGrefine_6860:HG2_Ill_GATKHC_16344:HG2_Ill_Krunchall_13989:HG2_Ill_SVrefine2DISCOVARplusDovetail_13426:HG2_Ill_SpiralSDKrefine_17619:HG2_Ill_scalpel_9661:HG2_Ill_svaba_12696:HG4_Ill_150bpfermikitraw_12995:HG4_Ill_250bpfermikitraw_13568:HG4_Ill_FB_8832:HG4_Ill_GATKHCSBGrefine_6999:HG4_Ill_GATKHC_16363:HG4_Ill_Krunchall_14223:HG4_Ill_scalpel_9398:HG4_Ill_svaba_12779;NumExactMatchSVs=19;ClusterMaxShiftDist=0.115385;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.192308;PBcalls=2;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=50;DistBack=40868;DistForward=6144;DistMin=6144;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=9:18400143-18400144;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:28:0|1:37:1:0:22:./.:0:0:0:0:0/1:27:34:./.:.:.:.:.:.
chr9	21038487	HG4_PB_HySA_14733	C	CCCTGCAACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGTAGTGCAGTGGCGATCTCGGCTCACTGCAAGCTCCGCTCCCGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACACAGGCGCCCGCCACTACGCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCGTTTTAGCCGGATGGTCTCGATCTCCTGACTCGTGATCCGCCGCCTCGGCTCCCAAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCCG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6223:HG4_PB_pbsv_10152:HG2_PB_pbsv_10129:HG4_PB_HySA_14733:HG2_Ill_breakscan11_4045:HG3_PB_pbsv_9859:HG3_PB_HySA_15159:HG3_PB_SVrefine2PBcRDovetail_4663:HG2_PB_SVrefine2Falcon1plusDovetail_12271:HG4_PB_SVrefine2PBcRDovetail_5082;NumClusterSVs=10;ExactMatchIDs=HG4_PB_HySA_14733;NumExactMatchSVs=1;ClusterMaxShiftDist=0.23622;ClusterMaxSizeDiff=0.23622;ClusterMaxEditDist=0.311606;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=-15;DistForward=18;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=46;REFWIDENED=9:21038457-21038502;PctSeqSimilarity=0.9719;PctSizeSimilarity=0.9449;PctRecOverlap=0.9478;SizeDiff=-19;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=95;MatchId=5595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:29:0|1:40:10:4:16:./.:0:0:0:0:0/1:27:10:0/1:8:29:.:.:.
chr9	21109523	HG2_Ill_MetaSV_5307	T	TGAAAAATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_31156:HG2_PB_pbsv_10130:HG3_PB_pbsv_9860:HG2_PB_assemblyticsPBcR_26792:HG3_PB_assemblyticsfalcon_27448:HG2_PB_HySA_18275:HG4_PB_pbsv_10153:HG3_PB_HySA_15161:HG2_PB_SVrefine2Falcon1plusDovetail_12272:HG2_PB_SVrefine2PBcRplusDovetail_11477:HG2_PB_SVrefine2PB10Xhap12_7405:HG2_Ill_MetaSV_5307:HG2_Ill_GATKHCSBGrefine_6868:HG2_10X_SVrefine210Xhap12_7241:HG3_Ill_GATKHCSBGrefine_6762:HG4_PB_SVrefine2PBcRDovetail_5083:HG4_Ill_MetaSV_5534:HG4_Ill_GATKHCSBGrefine_7003:HG2_PB_SVrefine2Falcon2Bionano_4795:HG3_PB_SVrefine2PBcRDovetail_4664:HG4_PB_SVrefine2Falcon1Dovetail_6224:HG3_Ill_MetaSV_5486:HG4_PB_HySA_14734:HG2_PB_PB10Xdip_31155:HG2_Ill_breakscan11_4046;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6868:HG2_Ill_MetaSV_5307:HG2_PB_SVrefine2PB10Xhap12_7405:HG2_PB_SVrefine2PBcRplusDovetail_11477;NumExactMatchSVs=4;ClusterMaxShiftDist=0.154712;ClusterMaxSizeDiff=0.154712;ClusterMaxEditDist=0.240109;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=342;DistBack=15624;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=9:21109524-21109534;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9971;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5596.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:0:26:1:28:./.:0:0:0:0:1/1:0:21:1/1:2:51:.:.:.
chr9	21261949	HG2_PB_pbsv_10131	T	TTGGCCGGGCGCAGGTGGCTCACGCCTGTAATCCAGACTTTGGAGGCCGAGGCGGGCGGATCCTGAGGTCAGGAGATCGAGACCATCCTGGCTAACACCGGTGAACTGACCCGTCTCTACTAAAATACAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCAGCTACTCGGGAGGCTGAGAGGCAGGAGAATGGCGTGAAACCCCAGGGGGCGGAGCCTGCAGTGAGCGAGATTGCGCCACTGCATGCTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4047:HG2_PB_pbsv_10131:HG2_PB_SVrefine2Falcon1plusDovetail_12273:HG3_PB_pbsv_9861;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_10131;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0286169;ClusterMaxSizeDiff=0.0126984;ClusterMaxEditDist=0.205371;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=0;DistForward=4680;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=9:21261950-21261950;PctSeqSimilarity=0.9663;PctSizeSimilarity=0.9968;PctRecOverlap=0.9653;SizeDiff=1;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=97;MatchId=5597.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:21:./.:48:0:9:24:./.:0:0:0:0:0/1:18:5:0/1:7:21:.:.:.
chr9	22288707	HG2_PB_PB10Xdip_31157	T	TGCCTGTGTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4048:HG3_PB_pbsv_9865:HG2_PB_pbsv_10133:HG4_PB_HySA_14739:HG4_PB_pbsv_10156:HG3_PB_assemblyticsfalcon_27455:HG2_PB_PB10Xdip_31158:HG2_PB_PB10Xdip_31157:HG3_PB_SVrefine2PBcRDovetail_4666:HG2_PB_SVrefine2Falcon1plusDovetail_12275:HG2_PB_SVrefine2PBcRplusDovetail_11479:HG2_PB_SVrefine2PB10Xhap12_7407:HG2_PB_HySA_18284:HG4_PB_SVrefine2PBcRDovetail_5085:HG4_PB_SVrefine2Falcon1Dovetail_6226:HG2_PB_SVrefine2Falcon2Bionano_4797:HG4_Ill_GATKHCSBGrefine_7006:HG2_10X_SVrefine210Xhap12_7245:HG3_PB_HySA_15167;NumClusterSVs=19;ExactMatchIDs=HG2_PB_PB10Xdip_31157:HG2_PB_PB10Xdip_31158;NumExactMatchSVs=2;ClusterMaxShiftDist=0.165926;ClusterMaxSizeDiff=0.165926;ClusterMaxEditDist=0.22619;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=325;DistBack=116400;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=9:22288708-22288722;PctSeqSimilarity=0.9588;PctSizeSimilarity=0.9207;PctRecOverlap=0.9207;SizeDiff=-28;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=93;MatchId=5600.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:1/1:0:29:0:35:./.:0:0:0:0:1/1:1:19:1/1:2:69:.:.:.
chr9	22395706	HG3_Ill_SVrefine2DISCOVARDovetail_7549	C	CAAAAATGTAATCTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGACACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_10134:HG4_Ill_GATKHCSBGrefine_7007:HG4_PB_pbsv_10157:HG3_PB_SVrefine2PBcRDovetail_4667:HG3_PB_pbsv_9866:HG3_PB_assemblyticsfalcon_27456:HG3_Ill_SVrefine2DISCOVARDovetail_7549:HG3_Ill_MetaSV_5489:HG3_Ill_GATKHCSBGrefine_6767:HG2_PB_SVrefine2Falcon2Bionano_4798:HG2_Ill_MetaSV_5308:HG2_10X_SVrefine210Xhap12_7246:HG2_PB_SVrefine2Falcon1plusDovetail_12276:HG4_PB_SVrefine2Falcon1Dovetail_6227:HG4_PB_HySA_14742;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7246:HG2_Ill_MetaSV_5308:HG2_PB_SVrefine2Falcon2Bionano_4798:HG3_Ill_GATKHCSBGrefine_6767:HG3_Ill_MetaSV_5489:HG3_Ill_SVrefine2DISCOVARDovetail_7549:HG3_PB_SVrefine2PBcRDovetail_4667:HG4_Ill_GATKHCSBGrefine_7007;NumExactMatchSVs=8;ClusterMaxShiftDist=0.195827;ClusterMaxSizeDiff=0.195827;ClusterMaxEditDist=0.224719;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=305;DistBack=2465;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=9:22395707-22395722;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:28:./.:10:18:14:10:./.:0:0:0:0:0/1:27:7:0/1:5:32:.:.:.
chr9	22903887	HG2_Ill_250bpfermikitraw_13713	A	AACTATGTGTTTTTTATTTTATTTGTAAAAATTTATGGGTACAAGTGTAATTCTGTTACATGGATAGATTGCAGATTGGTAAGTCTGAGCTTTTAGTATATCCTAACCATCCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7249:HG4_PB_pbsv_10160:HG2_PB_PB10Xdip_31161:HG3_PB_HySA_15173:HG3_PB_pbsv_9869:HG2_PB_SVrefine2Falcon1plusDovetail_12278:HG2_PB_pbsv_10136:HG3_PB_assemblyticsfalcon_27462:HG4_PB_SVrefine2Falcon1Dovetail_6228:HG4_PB_HySA_14748:HG2_PB_HySA_18291:HG4_Ill_svaba_12808:HG4_Ill_GATKHC_16403:HG4_Ill_GATKHCSBGrefine_7009:HG3_PB_SVrefine2PBcRDovetail_4669:HG3_Ill_svaba_12867:HG3_Ill_SVrefine2DISCOVARDovetail_7552:HG3_Ill_MetaSV_5491:HG3_Ill_GATKHC_16335:HG3_Ill_GATKHCSBGrefine_6768:HG3_Ill_250bpfermikitraw_13323:HG3_Ill_150bpfermikitraw_12912:HG2_PB_SVrefine2PBcRplusDovetail_11481:HG2_PB_SVrefine2PB10Xhap12_7409:HG2_PB_SVrefine2Falcon2Bionano_4800:HG2_Ill_svaba_12728:HG2_Ill_SVrefine2DISCOVARplusDovetail_13445:HG2_Ill_MetaSV_5310:HG2_Ill_GATKHC_16385:HG2_Ill_GATKHCSBGrefine_6872:HG2_Ill_250bpfermikitraw_13713:HG2_Ill_150bpfermikitraw_12869;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7249:HG4_Ill_svaba_12808:HG4_Ill_GATKHC_16403:HG4_Ill_GATKHCSBGrefine_7009:HG3_PB_SVrefine2PBcRDovetail_4669:HG3_Ill_svaba_12867:HG3_Ill_SVrefine2DISCOVARDovetail_7552:HG3_Ill_MetaSV_5491:HG3_Ill_GATKHC_16335:HG3_Ill_GATKHCSBGrefine_6768:HG3_Ill_250bpfermikitraw_13323:HG3_Ill_150bpfermikitraw_12912:HG2_PB_SVrefine2PBcRplusDovetail_11481:HG2_PB_SVrefine2PB10Xhap12_7409:HG2_PB_SVrefine2Falcon2Bionano_4800:HG2_Ill_svaba_12728:HG2_Ill_SVrefine2DISCOVARplusDovetail_13445:HG2_Ill_MetaSV_5310:HG2_Ill_GATKHC_16385:HG2_Ill_GATKHCSBGrefine_6872:HG2_Ill_250bpfermikitraw_13713:HG2_Ill_150bpfermikitraw_12869;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0704846;ClusterMaxSizeDiff=0.061674;ClusterMaxEditDist=0.253275;PBcalls=14;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=112;DistBack=81893;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=112;REFWIDENED=9:22903888-22903999;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5602.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:./.:0:0:0:0:./.:0:0:0:0:1/1:0:43:./.:.:.:.:.:.
chr9	23704134	HG2_Ill_MetaSV_5313	T	TGGTCACGCTGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCC	20	PASS	ClusterIDs=HG2_PB_HySA_18299:HG3_PB_pbsv_9873:HG2_PB_SVrefine2Falcon2Bionano_4803:HG2_PB_pbsv_10139:HG2_Ill_MetaSV_5313;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_MetaSV_5313:HG2_PB_SVrefine2Falcon2Bionano_4803;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0973783;ClusterMaxSizeDiff=0.0674157;ClusterMaxEditDist=0.270073;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=129;DistBack=8;DistForward=30968;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=9:23704135-23704149;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:34:0|1:35:0:2:28:./.:0:0:0:0:0/1:22:7:./.:.:.:.:.:.
chr9	28409874	HG2_PB_assemblyticsPBcR_26842	G	GAGAGGGAGGAAGGCAGGGAGGGTGTGAGGGAGGGAGAGAGAAATAAAGGGAGAAGGAAAGGA	20	PASS	ClusterIDs=HG2_PB_HySA_18344:HG3_PB_pbsv_9897:HG4_Ill_GATKHC_16450:HG4_PB_pbsv_10182:HG4_Ill_GATKHCSBGrefine_7027:HG4_Ill_250bpfermikitraw_13641:HG4_Ill_150bpfermikitraw_13068:HG3_Ill_GATKHC_16392:HG3_Ill_250bpfermikitraw_13368:HG3_Ill_150bpfermikitraw_12961:HG2_PB_assemblyticsPBcR_26842:HG2_Ill_GATKHC_16440:HG2_Ill_250bpfermikitraw_13752:HG2_Ill_150bpfermikitraw_12918:HG4_PB_HySA_14796:HG2_PB_PB10Xdip_31194:HG2_PB_PB10Xdip_31193;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12918:HG2_Ill_250bpfermikitraw_13752:HG2_Ill_GATKHC_16440:HG2_PB_assemblyticsPBcR_26842:HG3_Ill_150bpfermikitraw_12961:HG3_Ill_250bpfermikitraw_13368:HG3_Ill_GATKHC_16392:HG4_Ill_150bpfermikitraw_13068:HG4_Ill_250bpfermikitraw_13641:HG4_Ill_GATKHCSBGrefine_7027:HG4_Ill_GATKHC_16450;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.267717;PBcalls=7;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=34758;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=144;REFWIDENED=9:28409875-28410018;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5606.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:3:23:0:16:./.:0:0:0:0:0/1:3:19:./.:.:.:.:.:.
chr9	28848068	HG3_Ill_GATKHCSBGrefine_6805	A	ATTATATATATACACACTATATATAGTGTGTATATATACTATATATACACACTATATATAGTGTGTATATATACTATATATACACACTATATATAGTGTGTATATATACTATATACACACTATATATAGTGTGTATATATAT	20	PASS	ClusterIDs=HG3_Ill_150bpfermikitraw_12969:HG4_Ill_GATKHCSBGrefine_7031:HG2_PB_HySA_18357:HG3_Ill_GATKHCSBGrefine_6805:HG2_Ill_GATKHCSBGrefine_6897:HG2_PB_HySA_18356:HG2_PB_HySA_18355:HG4_PB_pbsv_10185:HG3_PB_pbsv_9900:HG2_Ill_MetaSV_5317:HG3_Ill_250bpfermikitraw_13375;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6897:HG3_Ill_GATKHCSBGrefine_6805:HG4_Ill_GATKHCSBGrefine_7031;NumExactMatchSVs=3;ClusterMaxShiftDist=0.213333;ClusterMaxSizeDiff=0.213333;ClusterMaxEditDist=0.294521;PBcalls=5;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=141;DistBack=14;DistForward=13065;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=311;REFWIDENED=9:28848050-28848360;PctSeqSimilarity=0.9604;PctSizeSimilarity=0.9592;PctRecOverlap=0.8503;SizeDiff=-6;StartDistance=19;EndDistance=19;GTMatch=1;TruScore=92;MatchId=5607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:64:./.:0:2:0:0:./.:0:0:0:0:./.:1:15:./.:.:.:.:.:.
chr9	28960601	HG2_PB_SVrefine2Falcon2Bionano_4814	T	TAAGAAATATGTATAATTGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_10159:HG3_PB_HySA_15242:HG3_PB_pbsv_9901:HG4_PB_pbsv_10186:HG4_PB_HySA_14806:HG2_PB_assemblyticsPBcR_26849:HG2_PB_PB10Xdip_31196:HG2_Ill_breakscan11_4051:HG2_PB_SVrefine2PB10Xhap12_7421:HG2_PB_SVrefine2Falcon2Bionano_4814:HG2_PB_SVrefine2Falcon1plusDovetail_12289:HG2_PB_SVrefine2PBcRplusDovetail_11493:HG2_10X_SVrefine210Xhap12_7262:HG4_PB_SVrefine2Falcon1Dovetail_6246:HG2_PB_HySA_18360;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12289:HG2_PB_SVrefine2Falcon2Bionano_4814:HG2_PB_SVrefine2PB10Xhap12_7421;NumExactMatchSVs=3;ClusterMaxShiftDist=0.152466;ClusterMaxSizeDiff=0.152466;ClusterMaxEditDist=0.224215;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=335;DistBack=28495;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=9:28960602-28960619;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5608.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:2:7:0:7:./.:0:0:0:0:1/1:0:25:1/1:2:42:.:.:.
chr9	29622073	HG2_PB_pbsv_10161	G	GGGGGGGGAGGGAAGGTGGGGGAGGAAAGGGGGGGAGGCAGGGGGGAGGCAGGGGTGGGA	10	PASS	ClusterIDs=HG2_PB_HySA_18364:HG2_PB_pbsv_10161:HG2_PB_PB10Xdip_31198:HG2_PB_PB10Xdip_31199;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_10161;NumExactMatchSVs=1;ClusterMaxShiftDist=0.201835;ClusterMaxSizeDiff=0.201835;ClusterMaxEditDist=0.201835;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=59;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=120;REFWIDENED=9:29622028-29622147;PctSeqSimilarity=0.9565;PctSizeSimilarity=0.9153;PctRecOverlap=0.9322;SizeDiff=5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=93;MatchId=5609.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:17:49:./.:10:28:2:13:./.:0:0:0:0:./.:1:2:./.:.:.:.:.:.
chr9	29730689	HG4_Ill_manta_2476	A	AATTAGCTACGCAGTGTACTAGGGCTTGCTTGCTTGTTCACACTACTGGACAAGACAGTGTCTACTTATAAAGGCTAGCTGCTCGTG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_12933:HG4_PB_pbsv_10190:HG3_PB_pbsv_9906:HG2_PB_HySA_18367:HG4_Ill_svaba_12861:HG2_PB_pbsv_10163:HG4_Ill_manta_2476:HG4_Ill_Krunchall_14323:HG4_Ill_GATKHCSBGrefine_7034:HG4_Ill_Cortex_3796:HG4_Ill_250bpfermikitraw_13660:HG3_Ill_svaba_12936:HG3_Ill_manta_2381:HG3_Ill_Spiral_10773:HG3_Ill_Krunchall_13781:HG3_Ill_GATKHC_16416:HG3_Ill_GATKHCSBGrefine_6809:HG3_Ill_Cortex_3841:HG3_Ill_250bpfermikitraw_13387:HG3_Ill_150bpfermikitraw_12979:HG2_Ill_svaba_12779:HG2_Ill_manta_2913:HG2_Ill_SpiralSDKrefine_17681:HG2_Ill_Krunchall_14084:HG2_Ill_GATKHC_16457:HG2_Ill_GATKHCSBGrefine_6901:HG2_Ill_Cortex_9276:HG2_Ill_250bpfermikitraw_13764;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12933:HG4_Ill_svaba_12861:HG4_Ill_manta_2476:HG4_Ill_Krunchall_14323:HG4_Ill_GATKHCSBGrefine_7034:HG4_Ill_Cortex_3796:HG4_Ill_250bpfermikitraw_13660:HG3_Ill_svaba_12936:HG3_Ill_manta_2381:HG3_Ill_Spiral_10773:HG3_Ill_Krunchall_13781:HG3_Ill_GATKHC_16416:HG3_Ill_GATKHCSBGrefine_6809:HG3_Ill_Cortex_3841:HG3_Ill_250bpfermikitraw_13387:HG3_Ill_150bpfermikitraw_12979:HG2_Ill_svaba_12779:HG2_Ill_manta_2913:HG2_Ill_SpiralSDKrefine_17681:HG2_Ill_Krunchall_14084:HG2_Ill_GATKHC_16457:HG2_Ill_GATKHCSBGrefine_6901:HG2_Ill_Cortex_9276:HG2_Ill_250bpfermikitraw_13764;NumExactMatchSVs=24;ClusterMaxShiftDist=0.188235;ClusterMaxSizeDiff=0.188235;ClusterMaxEditDist=0.214286;PBcalls=4;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=6477;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=9:29730690-29730696;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5610.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:41:0|1:31:1:0:38:./.:0:0:0:0:0/1:25:12:./.:.:.:.:.:.
chr9	29877639	HG2_10X_SVrefine210Xhap12_7264	T	TAATAAGACAATGTTAAACAATCCTGGCGTTCTAATAGAGCATGAAGAAATAAAAGCAGTGAGAAATGAGGATTGTGGCCATCAATAATGATACAATATTTTATTTTTAATGTGTATGCATGCAGGTATGTGTGTATGAGTATGTTGGATATATTTTACAAAAGCTGGACCTAAAATAGATTGAAAATGTAAAAACAAAGGCATGAATGGGGCAGGAGAGGGCTCTTCTCCCCTCCTTCCCCTAGGAATGTCAGGTGATGGTTTGTCAGTTATCACAAATGCCTCCCTGAAAATGATAATTTGGCAGCCCGCTGAGGGTACCAGGGAGAAGTCATTTCCCAATCACCCACAGGTATTAACATTAAAATGTTAATTGAATGCAGATACCACGGAGAAGAAACTTCATGGGCATATGCACTAAGAGATGAAGTGGTGGAATATGACTCTCCAGGTGCACCCTAATGGAAAAAGGAAGAAAGCCTCAGATGGACATGCATACACCTTCCTAAACACACTGCGTGTGCTCCATTCCCAAGGGTAAGTGGGGAACTCTACATGCAGGAAGCCCATCCTAATAGAAGAATCACGGGAAAGAGGTGAGCCTATAAAGCCCTAAGATCAAGGTTAAACATTCCTTTTCCCTTTGACCTTCAGGGGCCCTCTTGGATTTCTTCCAAGTGAATTTTCCTTTCTTTCCTGTTCTAAAGCCTTATAAATAAACTTCCACTCCTGCTCTGCAACTTGCCTTGGTCCCTTATATGCTTTATGCCTGTATTAGTTTGTTCTTGCACTGCTAATAAAGACATACTCAAGACTGGGTAATTTATAAAGGAAAGAGGTTTAATTGACTCACAGTTCTGAATGGCTGGGGAGGTCTCGGGAAACTTACAATCATGGCAGAATGGGACGCAAACACGACCTTCTCACATGATGACAGGAGAGAGAAGAATGAGCACCCAGCAAAAGGGGAAGCCCCTTGTAAAACCATCAGATCTCGTGAGAACTAAGTCACTGTCGTGAGGATGGAGGAAACTGCCCCCATGATTCAATTGTCTCCACCTGGTCCTGTAGCAGGATGAGCTGCCAACAAAACCTCTCAGACACCGAGTAGTAGAATGAAGGGCTTTCTTCAGCTAGGAGCATCAGCAAGCTACAGCCTTAAAATCCGAGCTCCCCGAGTGCACAATTTCTGTCCTTTTTAAGGGCTCACAACTCTAAAGATTTCACATGAAAGGGTCGTGATTGATTTGAGCAAGCAGGTGGTACGTGACAGGGGCTGCATGTACCGCTGGTCAGAGAGAAACGGAACAGGGCAGGGAGTTTCACAATGTTCTTCTACACAATGTCTGGAATCTATGACTAACATCAGTTTCTAAGTTATGAGTTGATTTTTAACTACTGGGTTTAAGCCAGGCAGGCCCAGGCCTGGTTTCAGGCCTGGCGCCACGCTGCCTGTCTTTGGTTTTACTTCCTTGTTGTTTTTTCTTAAAACAGGTACTGAGTATAAAACAATATGAAAGGGTCTCTCTCTTCCCTTAGTCCCTCCCATGACATTATGGGATTATGGAAACTACAATTCAAGGTGAGATTTGGGTGGGGACACAGCCAAACCATATCAATTCCCCTTTGTCAAATTATTTCTTCTTAAGAGGCAAGAATTGAAGTTGCTGGAGACCGGTACGGATTCACCACCAGTAACTCAGGGTAAATCAGATCTCTTCCACCAGTAACAATTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTAGACAGGGCCTCACTCTGTCACTGAGGATGGAGTGCAGTAGTGTGATTTGGCTCCCTGCAGCCTCGACCTCCTAGGTTCAAGCATTTCTCCTGTTTCTGCCTTCCCAGTAGCTGAGATTATAGGCTCCCACCACCATGTCCAGTTAATTTTTTGTATTTCTAGTAGAGATGGGATTTCACCATGTTGACCAAGCTGATCTCGTACTCCTAACTTTCACTCACGTCCGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAGCAACAAGGCTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCCGAAAAGAGTCAGCGAAGGGAGATGGGGTGGGGCCGTTTTATAGGGTTTGGGTAGGTAAAGGAAAATTACGTCAAAGGGGGGTTGTTCTCTGGCGGGCAGGAGTGGGGGGTGACAAGGTGCTCAGTAGGGGAGCTTTTGAGCAAGGATGAGCCAGGAGAAGGAATTTCACAAGATAATGTCATCAGTTAAGGCAGGAACAGGCCATTTTCACTTCTTTTGTGGTGGAATGTCATCAGTTAAGTCAGGAACCGACCATCTGGATGTGTACCCGCAGGTCATAGGGGATACGATGGCTTAGCTTGGGCTCAGAGGACTGACACTAACCTCAAGTGATCTGCCAGCCCTGGACTCCCAAAGTGCTAGGATTACAGGCGTAAGCCACCGCACCTGGACAATTTAACTTTTCTTATTATAATTCTGTATGGTAAATCTTGTGAAATACACATTTTGTTTAACTACATCACCCATTGTATTTATTTGTTGATAGATGGACATTCTAGGTAGATTATTAATATTCCAATATTTGATTAATCTTGGGAAAAAACAGATTCCTAGTAGCTTTGTTCATTCAGCAGATAAAGTGAAAATGAATATCCTGCTGTATTAAAGCTATTACACTTGGGTATGTGGCACAATCGTTTAAAAGTTCTTTTTACAAATAGTATTGAGTTGCATAAAAAGACTGTAATAAAACATTTAAGAAAAAATGGTGCAGTGTATTAATATGAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6250:HG4_PB_pbsv_10192:HG2_PB_PB10Xdip_31226:HG4_PB_HySA_14820:HG2_PB_SVrefine2Falcon1plusDovetail_12293:HG4_PB_SVrefine2PBcRDovetail_5095:HG2_PB_HySA_18369:HG2_PB_SVrefine2PBcRplusDovetail_11498:HG2_10X_SVrefine210Xhap12_7264:HG2_PB_SVrefine2PB10Xhap12_7426;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7264:HG2_PB_SVrefine2PBcRplusDovetail_11498;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0517121;ClusterMaxSizeDiff=0.0510311;ClusterMaxEditDist=0.129279;PBcalls=9;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=2797;DistBack=9160;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=9:29877640-29877650;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9993;PctRecOverlap=0.9975;SizeDiff=-2;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=5611.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:67:0|1:33:1:1:44:./.:0:0:0:0:0/1:29:19:0/1:107:221:.:4813:.
chr9	29879367	HG2_Ill_150bpfermikitraw_12935	T	TTTTCAGCTAACTTTTAGCTGAAGTTTCAGCTAACTTTTAGCTGAAGTTTCAGCTAACTTTTAGCTGAAG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_12935:HG2_PB_HySA_18372:HG2_PB_HySA_18371:HG4_Ill_GATKHCSBGrefine_7036:HG3_Ill_GATKHCSBGrefine_6810:HG2_Ill_GATKHCSBGrefine_6903:HG2_PB_assemblyticsPBcR_26860:HG4_PB_pbsv_10193:HG4_PB_HySA_14822:HG4_Ill_svaba_12865:HG4_Ill_Krunchall_14325:HG4_Ill_250bpfermikitraw_13662:HG4_Ill_150bpfermikitraw_13088:HG3_Ill_svaba_12939:HG3_Ill_Krunchall_13783:HG3_Ill_250bpfermikitraw_13389:HG3_Ill_150bpfermikitraw_12981:HG2_Ill_svaba_12783:HG2_Ill_Krunchall_14086:HG2_Ill_250bpfermikitraw_13766;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12935:HG4_Ill_svaba_12865:HG4_Ill_Krunchall_14325:HG4_Ill_250bpfermikitraw_13662:HG4_Ill_150bpfermikitraw_13088:HG3_Ill_svaba_12939:HG3_Ill_Krunchall_13783:HG3_Ill_250bpfermikitraw_13389:HG3_Ill_150bpfermikitraw_12981:HG2_Ill_svaba_12783:HG2_Ill_Krunchall_14086:HG2_Ill_250bpfermikitraw_13766;NumExactMatchSVs=12;ClusterMaxShiftDist=0.112676;ClusterMaxSizeDiff=0.112676;ClusterMaxEditDist=0.15493;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=23;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=64;REFWIDENED=9:29879337-29879400;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5612.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:0|1:26:2:1:22:./.:0:0:0:0:0/1:30:26:./.:.:.:.:4813:.
chr9	30734675	HG2_Ill_MetaSV_5322	T	TAAACATGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6257:HG2_PB_pbsv_10170:HG3_PB_HySA_15259:HG3_PB_pbsv_9914:HG2_Ill_manta_2916:HG3_Ill_manta_2386:HG2_Ill_MetaSV_5322:HG2_Ill_GATKHCSBGrefine_6908:HG2_PB_SVrefine2Falcon1plusDovetail_12296:HG3_PB_SVrefine2PBcRDovetail_4686:HG3_Ill_MetaSV_5504:HG3_Ill_GATKHCSBGrefine_6817;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6908:HG2_Ill_MetaSV_5322:HG3_Ill_manta_2386;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0514469;ClusterMaxSizeDiff=0.0257235;ClusterMaxEditDist=0.208;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=308;DistBack=14126;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=9:30734676-30734684;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5613.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:49:30:1|0:0:28:46:2:./.:0:0:0:0:0/1:32:14:./.:3:27:.:.:.
chr9	31978473	HG2_Ill_SVrefine2DISCOVARplusDovetail_13483	A	ATGGGATACATATAGATATCTGTTACTTGGTATTCTTTGACCTTAATCTCCCCATTTTTCTCCATTCTTCACCCTGCCTCTGGTAACAAATATTTTGTTCTCTATCTCTGTATATTTCAAATTTGTTTTAGATTCCATATGTAAATGATCATGCAATAAAGATAGTCCCTCCCTTACAGTGTTTTGATTTGCGGTTGTTTGACTTTACAGTGATAAGAAAGTAATATGCATTCAGTATAAACCACACATAAAATTTCGAATTTTGATGTTTTCC	20	PASS	ClusterIDs=HG4_PB_pbsv_10204:HG2_Ill_breakscan11_4053:HG2_PB_pbsv_10176:HG3_PB_SVrefine2Falcon1Dovetail_6174:HG4_Ill_SVrefine2DISCOVARDovetail_7362:HG2_Ill_SVrefine2DISCOVARplusDovetail_13483:HG2_Ill_MetaSV_5324:HG2_Ill_GATKHCSBGrefine_6911:HG2_10X_SVrefine210Xhap12_7273:HG4_PB_SVrefine2Falcon1Dovetail_6262:HG4_Ill_MetaSV_5552:HG4_Ill_GATKHCSBGrefine_7044;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7273:HG2_Ill_GATKHCSBGrefine_6911:HG2_Ill_MetaSV_5324:HG2_Ill_SVrefine2DISCOVARplusDovetail_13483:HG4_Ill_SVrefine2DISCOVARDovetail_7362;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0742049;ClusterMaxSizeDiff=0.0706714;ClusterMaxEditDist=0.227979;PBcalls=4;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=273;DistBack=4010;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=9:31978474-31978481;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5614.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:37:0|1:53:1:1:36:./.:0:0:0:0:0/1:24:17:./.:.:.:.:.:.
chr9	32420098	HG4_Ill_manta_2479	T	TTCCATATTACCAAAAGAGCCCATCTGTGTGGTTGTAGCTAGAAACTGGCTTTATGCAGAGCTAAGTCAG	20	PASS	ClusterIDs=HG2_PB_HySA_18397:HG4_PB_pbsv_10209:HG4_PB_HySA_14855:HG2_PB_pbsv_10179:HG4_Ill_svaba_12891:HG4_Ill_manta_2479:HG4_Ill_SVrefine2DISCOVARDovetail_7366:HG4_Ill_Krunchall_14351:HG4_Ill_GATKHC_16503:HG4_Ill_GATKHCSBGrefine_7047:HG4_Ill_250bpfermikitraw_13685:HG2_Ill_svaba_12810:HG2_Ill_Krunchall_14114:HG2_Ill_GATKHC_16492:HG2_Ill_GATKHCSBGrefine_6914:HG2_Ill_250bpfermikitraw_13792;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13792:HG2_Ill_GATKHCSBGrefine_6914:HG2_Ill_GATKHC_16492:HG2_Ill_Krunchall_14114:HG2_Ill_svaba_12810:HG4_Ill_250bpfermikitraw_13685:HG4_Ill_GATKHCSBGrefine_7047:HG4_Ill_GATKHC_16503:HG4_Ill_Krunchall_14351:HG4_Ill_SVrefine2DISCOVARDovetail_7366:HG4_Ill_manta_2479:HG4_Ill_svaba_12891;NumExactMatchSVs=12;ClusterMaxShiftDist=0.056338;ClusterMaxSizeDiff=0.028169;ClusterMaxEditDist=0.265734;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=35536;DistForward=43787;DistMin=35536;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=71;REFWIDENED=9:32420099-32420169;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:28:./.:8:17:21:3:./.:0:0:0:0:0/1:18:27:./.:.:.:.:.:.
chr9	32463888	HG2_PB_PB10Xdip_31276	AAATAAA	TTTTTTTTTTTTTTTTTTTTTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTC	20	PASS	ClusterIDs=HG3_Ill_MetaSV_5508:HG2_PB_HySA_18398:HG3_PB_SVrefine2PBcRDovetail_4693:HG2_PB_SVrefine2Falcon2Bionano_4823:HG4_PB_SVrefine2Falcon1Dovetail_6264:HG4_Ill_SVrefine2DISCOVARDovetail_7367:HG2_PB_assemblyticsPBcR_26881:HG2_PB_SVrefine2PBcRplusDovetail_11505:HG2_PB_SVrefine2PB10Xhap12_7434:HG2_PB_SVrefine2Falcon1plusDovetail_12302:HG2_PB_PB10Xdip_31277:HG2_PB_PB10Xdip_31276:HG2_Ill_SVrefine2DISCOVARplusDovetail_13486:HG2_10X_SVrefine210Xhap12_7274:HG4_Ill_manta_2480:HG3_Ill_SVrefine2DISCOVARDovetail_7601:HG2_PB_pbsv_10180:HG3_PB_pbsv_9926:HG4_PB_pbsv_10210:HG3_PB_HySA_15280:HG4_PB_HySA_14856:HG2_Ill_MetaSV_5325:HG4_Ill_MetaSV_5556;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7274:HG2_Ill_SVrefine2DISCOVARplusDovetail_13486:HG2_PB_PB10Xdip_31276:HG2_PB_PB10Xdip_31277:HG2_PB_SVrefine2Falcon1plusDovetail_12302:HG2_PB_SVrefine2PB10Xhap12_7434:HG2_PB_SVrefine2PBcRplusDovetail_11505:HG2_PB_assemblyticsPBcR_26881:HG4_Ill_SVrefine2DISCOVARDovetail_7367;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0840336;ClusterMaxSizeDiff=0.0728291;ClusterMaxEditDist=0.233333;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=170;DistBack=0;DistForward=35415;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=9:32463895-32463887;PctSeqSimilarity=0.9861;PctSizeSimilarity=0.9942;PctRecOverlap=0.9548;SizeDiff=-1;StartDistance=2;EndDistance=8;GTMatch=0;TruScore=97;MatchId=5616.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:1/1:0:31:0:27:./.:0:0:0:0:1/1:0:16:./.:.:.:.:.:.
chr9	32883287	HG2_10X_SVrefine210Xhap12_7277	GCC	ACCAAGCAAAAAAAAATCCCCAAAAAGCAGGACAGACAGTAATGGTCAAGTTCAGTGTGAACCTTTCCAAATCCAAGACTGGACCTGCACTCCTCTCCAGCCCAAGAGGAATTGGGGCCTGAGATGGTCTTCTCTGATCAGAGCTAAAGTATAGTGGGAAGAGCAGTAGACTCAGAGACCAGAGAACTGAATTCAATCCATCCTCTGTCACCAACTCACCAAGAGGCAATGCTGAGTGGAGAGGTCGTGCAAAAAAAAAAAAAAAAAAAAAATGGACTTTGGAGCTAGACAGAACTGGGTTCAAATCCCAGCTCACTCAATTACTCTTCT	20	PASS	ClusterIDs=HG3_Ill_Spiral_10803:HG2_PB_SVrefine2Falcon1plusDovetail_12303:HG2_10X_SVrefine210Xhap12_7277:HG3_PB_SVrefine2PBcRDovetail_4695:HG3_Ill_SVrefine2DISCOVARDovetail_7605:HG4_PB_SVrefine2Falcon1Dovetail_6265:HG2_PB_pbsv_10183:HG2_Ill_MetaSV_5327:HG3_Ill_MetaSV_5510:HG3_PB_pbsv_9929;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7277:HG2_PB_SVrefine2Falcon1plusDovetail_12303;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0542169;ClusterMaxSizeDiff=0.0329835;ClusterMaxEditDist=0.199108;PBcalls=5;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=327;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=9:32883290-32883286;PctSeqSimilarity=0.997;PctSizeSimilarity=1;PctRecOverlap=0.9939;SizeDiff=0;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:30:0|1:25:0:0:29:./.:0:0:0:0:0/1:31:5:0/1:10:21:.:.:.
chr9	33130548	HG2_PB_SVrefine2Falcon1plusDovetail_12306	T	TTCAATATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGCAGAAGATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGGGGGCCGACCCCCCACCTCCCTCCGGACGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCCGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGCGGGGCGGCTGACCCCCCATCTCCCTCCCGGATGGCATGGCTGGCCGGGGGGGGGCTGACCCCCACCTCCCTCCCGGATGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGATGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGAGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGATGGCGGCGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTAGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCAAGGCTGGCGGATCACTCGCGGTTAGGGGCTGGAGACCGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAACCAGTCAGGCGTGGCGGCGCGTGCCTGCAATCGCAGGCACTCGGCAGGCTTCCCTGAACCCGCGAGCTGGAAGCCGAGACCAGCTGGTCGCTGCCGGGCCCGCTAGTAGCCCACGGAGAAGCCGCCCACAGCCGGACACCAGAGCCTTGAGGGCCGCCATCTTCAAAAACCTACCCTCGTAATTTTTTTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4054:HG3_PB_pbsv_9931:HG2_PB_SVrefine2PBcRplusDovetail_11508:HG2_PB_SVrefine2Falcon2Bionano_4826:HG2_PB_SVrefine2Falcon1plusDovetail_12306:HG2_PB_HySA_18412;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12306;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0133399;ClusterMaxSizeDiff=0.0128458;ClusterMaxEditDist=0.0971018;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=2010;DistBack=3611;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=9:33130549-33130564;PctSeqSimilarity=0.9923;PctSizeSimilarity=0.9872;PctRecOverlap=0.9872;SizeDiff=-26;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:41:0|1:32:0:0:35:./.:0:0:0:0:0/1:39:12:0/1:64:184:.:2055:.
chr9	33667065	HG2_10X_SVrefine210Xhap12_7282	A	ATCCCTCTCCCTCTCCCCACGGTCTCCCTCTCCCTCTCCCTCTCCCCATGGTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7282:HG2_PB_PB10Xdip_31287:HG2_PB_PB10Xdip_31288:HG2_PB_HySA_18422:HG2_PB_pbsv_10190:HG4_Ill_GATKHC_16520:HG4_Ill_GATKHCSBGrefine_7057:HG2_Ill_GATKHC_16504:HG2_Ill_GATKHCSBGrefine_6922:HG4_Ill_SVrefine2DISCOVARDovetail_7378:HG2_PB_SVrefine2PBcRplusDovetail_11511:HG2_PB_SVrefine2PB10Xhap12_7442;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7282:HG4_Ill_SVrefine2DISCOVARDovetail_7378:HG2_PB_SVrefine2PBcRplusDovetail_11511:HG2_PB_SVrefine2PB10Xhap12_7442;NumExactMatchSVs=4;ClusterMaxShiftDist=0.152381;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.247619;PBcalls=6;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=52;DistBack=-51;DistForward=12;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=84;REFWIDENED=9:33667066-33667149;PctSeqSimilarity=0.9783;PctSizeSimilarity=0.963;PctRecOverlap=0.7091;SizeDiff=-2;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=88;MatchId=5620.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:39:1|0:5:31:22:2:./.:0:0:0:0:./.:21:2:./.:.:.:.:.:.
chr9	34681480	HG4_PB_SVrefine2PBcRDovetail_5101	C	CTGTATCTGAAGATGGGGTCTTTAGGAGGTAATTAAAGTTAAATGAGGCCGGGTGTGGTGGCTCACACCTGTAATCCCAGCCCTCTGGGAGACCGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCTTGGCCAACATGGTGAAGCCCTGTCTCTACTAAAAATAGAAAAAGTAGCTGGGTGTGGTGGTGTGTACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAGTGCTTGAACCCAGGAGTTGGAGATTGCATTGAGCCAAGATCATGCCACTGTACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAGAAGAAGAAGGAAAAAAAAGGTTAAATGAGGTCATAATCCGATAGGAGTATAGACTTAGAAGAAGAGGAAGGGACCTCCTTTGTCTCTCTCTGTCACATAGTAAGAAGGTGGCTGGCTGGTTGCAAGCCACAAAAAAAGCCCTCACCAGAAAGTGACTATCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12313:HG3_PB_pbsv_9941:HG4_PB_pbsv_10226:HG2_PB_pbsv_10196:HG4_PB_HySA_14877:HG3_Ill_MetaSV_5516:HG2_PB_HySA_18435:HG2_PB_PB10Xdip_31291:HG2_PB_PB10Xdip_31290:HG2_10X_SVrefine210Xhap12_7285:HG4_PB_SVrefine2PBcRDovetail_5101:HG2_PB_SVrefine2PBcRplusDovetail_11514:HG2_PB_SVrefine2PB10Xhap12_7445:HG2_PB_SVrefine2Falcon2Bionano_4831;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12313:HG4_PB_SVrefine2PBcRDovetail_5101:HG2_PB_SVrefine2PBcRplusDovetail_11514:HG2_PB_SVrefine2PB10Xhap12_7445:HG2_PB_SVrefine2Falcon2Bionano_4831;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0628067;ClusterMaxSizeDiff=0.060844;ClusterMaxEditDist=0.193672;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=495;DistBack=-496;DistForward=22204;DistMin=-496;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=498;REFWIDENED=9:34681481-34681978;PctSeqSimilarity=0.9991;PctSizeSimilarity=1;PctRecOverlap=0.8727;SizeDiff=0;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=95;MatchId=5621.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:84:1/1:0:29:0:12:./.:0:0:0:0:1/1:0:32:./.:3:25:.:.:.
chr9	34703685	HG2_PB_HySA_18436	T	TTTCTCTACTTTCTTTTTTTTTTTTTTTTTTAATTTTAAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACCACAGCACATGTTTCAGGGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCCAGAGGAATTTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGCAGAGGCGCCCCTCACCTCCCGGACGGGGGCGGCTGGCCGGGCAGGGGGGCCGACCCCCCCACCTCCCTCCGGAGGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCACTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACACCCCCACCTCCCTCCCGCGGACGGGGCGGCTGGCGCGGGCGGGGGCTGACCCCCCACCTCCTCCCGGACGGGCGGCTGGCCGGGCAGAGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCTGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCTGGCAGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCGCGGCGGGGGGCCGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGGAGGCTGACCCCCTCCACCTCCCTCCCGGACGGGCGGCTGGCCATGTGGGGGGCTGACCCCCCACACCTCCCTTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCATCTCCCTCCCGGACGGGGTGCTGGCCGGCGGCTGAGGGGCTCCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGTCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCTCCTCCCCGGATGGCACGGCTTGGCCGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCTGGGCGGAGACGCTCCTCACTTCCCAGATGGGTGGCTGCGGCCGGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTCTCTCATCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCAGACGGGGTCTCGGCCGGGCAGAGGCGCGCTCCTCACATCCCAGATGGGGGCGGCGGGGCAGAGGCGCTCCCCACAATCTCAGACGATGGGCGGCCGGGGCGAGACTCTCCTCACTTCCTAGATGTGATGGCGGCTGGGGAAGAGCGCGCTCCTCACTTCCTAGATGGGATGGCGGCTGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAGGCAGAGACCACTCCTCACTTCCCAGATGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTTAGGTTGTAGCGAGCCGAGATCACGCCACTGACTCGAGAGCCTGGGCACCATTGAGCACTGAGTGAACCAGACTCTCCTGTCTCGCATCCCGGACGCCTCCGGGTTGGCCGAGGTCATTGGCGGTCAGTCTCGGGGTTGCTGGGCTGGAGACCGCCGGTCAAACACAGCGAAACCCCGTCTCCACCAAAACCAGTCAGGGCGTGGCGGCACGTGCCTGCAATCGCAGGCATTCGGCAGACTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAAAGCAGTACAGTCCCAGCTTCGGCTCCGCATGAGAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6178:HG4_PB_pbsv_10227:HG4_PB_assemblyticsfalcon_27069:HG2_PB_pbsv_10197:HG2_PB_assemblyticsPBcR_26906:HG2_PB_HySA_18436:HG3_PB_HySA_15308:HG4_PB_HySA_14878:HG2_PB_SVrefine2Falcon1plusDovetail_12314:HG2_PB_SVrefine2PB10Xhap12_7446:HG4_PB_SVrefine2PBcRDovetail_5102:HG2_PB_SVrefine2PBcRplusDovetail_11515;NumClusterSVs=12;ExactMatchIDs=HG2_PB_HySA_18436;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0748231;ClusterMaxSizeDiff=0.0740142;ClusterMaxEditDist=0.205047;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=2504;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=9:34703686-34703686;PctSeqSimilarity=0.9788;PctSizeSimilarity=0.998;PctRecOverlap=0.9976;SizeDiff=5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5622.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:45:./.:10:16:10:8:./.:0:0:0:0:0/1:35:9:0/1:91:121:.:2816:.
chr9	34904793	HG2_Ill_GATKHCSBGrefine_6926	T	TTGGTACCAATTCTTCTTTGAATGTTTGGTAGAATTCTGCTGTGAATCCGTCTGGTCTTGGACTTTTTTTTGTTGGTAATTTTTAAATTACCATTTCAATCTCAC	20	PASS	ClusterIDs=HG3_PB_HySA_15310:HG2_PB_pbsv_10198:HG3_PB_pbsv_9942:HG2_PB_HySA_18437:HG3_PB_assemblyticsfalcon_27572:HG4_PB_HySA_14879:HG4_Ill_svaba_12911:HG4_Ill_MetaSV_5564:HG4_Ill_GATKHC_16536:HG4_Ill_GATKHCSBGrefine_7062:HG3_Ill_svaba_12986:HG3_Ill_manta_2389:HG3_Ill_Spiral_10816:HG3_Ill_SVrefine2DISCOVARDovetail_7613:HG3_Ill_MetaSV_5517:HG3_Ill_GATKHC_16477:HG3_Ill_GATKHCSBGrefine_6832:HG3_Ill_250bpfermikitraw_13438:HG3_Ill_150bpfermikitraw_13029:HG2_PB_SVrefine2Falcon2Bionano_4832:HG2_PB_SVrefine2Falcon1plusDovetail_12315:HG2_Ill_svaba_12825:HG2_Ill_SVrefine2DISCOVARplusDovetail_13496:HG2_Ill_MetaSV_5333:HG2_Ill_GATKHC_16519:HG2_Ill_GATKHCSBGrefine_6926:HG2_10X_SVrefine210Xhap12_7286:HG4_PB_pbsv_10228;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7286:HG2_Ill_GATKHCSBGrefine_6926:HG2_Ill_GATKHC_16519:HG2_Ill_MetaSV_5333:HG2_Ill_SVrefine2DISCOVARplusDovetail_13496:HG2_Ill_svaba_12825:HG2_PB_SVrefine2Falcon1plusDovetail_12315:HG2_PB_SVrefine2Falcon2Bionano_4832:HG3_Ill_150bpfermikitraw_13029:HG3_Ill_250bpfermikitraw_13438:HG3_Ill_GATKHCSBGrefine_6832:HG3_Ill_GATKHC_16477:HG3_Ill_MetaSV_5517:HG3_Ill_SVrefine2DISCOVARDovetail_7613:HG3_Ill_Spiral_10816:HG3_Ill_manta_2389:HG3_Ill_svaba_12986:HG4_Ill_GATKHCSBGrefine_7062:HG4_Ill_GATKHC_16536:HG4_Ill_MetaSV_5564:HG4_Ill_svaba_12911;NumExactMatchSVs=21;ClusterMaxShiftDist=0.101382;ClusterMaxSizeDiff=0.101382;ClusterMaxEditDist=0.290909;PBcalls=9;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=12;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=104;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=9:34904794-34904795;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5623.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:27:1:1:33:./.:0:0:0:0:0/1:38:34:./.:.:.:.:.:.
chr9	35018976	HG4_Ill_GATKHC_16537	T	TGTGTTGTTCCTCTCATGTGTCCATGTGTTTTCATTGTTCAGCTCCCACTTATAAGTGAGAACAC	20	PASS	ClusterIDs=HG2_PB_HySA_18438:HG2_PB_pbsv_10199:HG2_PB_HySA_18439:HG4_PB_pbsv_10229:HG4_PB_HySA_14880:HG3_PB_assemblyticsfalcon_27575:HG4_Ill_svaba_12912:HG3_PB_pbsv_9943:HG4_Ill_Krunchall_14373:HG4_Ill_GATKHC_16537:HG4_Ill_GATKHCSBGrefine_7063:HG4_Ill_250bpfermikitraw_13708:HG3_Ill_svaba_12988:HG3_Ill_Krunchall_13841:HG3_Ill_GATKHC_16479:HG3_Ill_GATKHCSBGrefine_6833:HG3_Ill_250bpfermikitraw_13440:HG3_Ill_150bpfermikitraw_13032:HG2_PB_assemblyticsPBcR_26908:HG2_Ill_svaba_12827:HG2_Ill_Krunchall_14133:HG2_Ill_GATKHC_16521:HG2_Ill_GATKHCSBGrefine_6927:HG2_Ill_250bpfermikitraw_13811:HG2_Ill_150bpfermikitraw_12979:HG4_PB_SVrefine2PBcRDovetail_5103:HG2_PB_PB10Xdip_31299:HG2_PB_PB10Xdip_31298;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12979:HG2_Ill_250bpfermikitraw_13811:HG2_Ill_GATKHCSBGrefine_6927:HG2_Ill_GATKHC_16521:HG2_Ill_Krunchall_14133:HG2_Ill_svaba_12827:HG2_PB_assemblyticsPBcR_26908:HG3_Ill_150bpfermikitraw_13032:HG3_Ill_250bpfermikitraw_13440:HG3_Ill_GATKHCSBGrefine_6833:HG3_Ill_GATKHC_16479:HG3_Ill_Krunchall_13841:HG3_Ill_svaba_12988:HG4_Ill_250bpfermikitraw_13708:HG4_Ill_GATKHCSBGrefine_7063:HG4_Ill_GATKHC_16537:HG4_Ill_Krunchall_14373:HG4_Ill_svaba_12912;NumExactMatchSVs=18;ClusterMaxShiftDist=0.211382;ClusterMaxSizeDiff=0.193548;ClusterMaxEditDist=0.354839;PBcalls=11;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=8806;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=65;REFWIDENED=9:35018977-35019041;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5624.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:51:1/1:2:17:0:11:./.:0:0:0:0:1/1:1:68:./.:.:.:.:.:.
chr9	35914414	HG2_PB_pbsv_10203	T	TGTGAAGCTGTATGTGTTGTAGTGAGTGTGTGTGTTTGTATTTGCTGTTGTGTGTGTTTGTAAGCTGTATTAATTATGTGTATGAGTGTGTTTTTGTATGCTGTGTGTGTGTTTAGCTGTATAGTGTGTAGTGAGTGTGTTTTGTATGCTGTGGTGTGTGTTAGTGTATTGTGTAGTTGAGTGTGTTTTTGTATGCGGTGGTGTGTGTGTTAAGCTGTAAATTGTGTGTAGTGATGTGTTTTGTGTATGCCTGTCGTGTGTGTGTAGCTGTATGTGTGTAGTGAGTGTGTTTTGTATGTGTGGGTGTGTGTAAGCTGTATGTGTTAGTGGAGTGTGTGGTTTTGTATGGCTGTGGTTGTGTAAGCTGATGTGTGTAGCTGAGTGTGTTGTTTGTATGCTGTGTGTTGTGTGTAAGCTGTATGTGGGTTAGGAGTGGTTTTTGTATGGCTGTGGTGTGTGTGGTAAGCTGTATGTGTGTGTAGTGTAGTCGTGTTTTTGTATGCTGATGGTGTGTGGTAAGGCGTGAGTATGTGTGTAGTGACGTGTCTGTTTTGTATTCTCGGTACGTGTGCTGTAAGCGTATGGTGTAGTGAGTGTGTTTTGCTTTGCTGTAGGTGTGTGTAAGACTGTATGTGTCGAGTGTGTGTGTTTTTGTTTCTGCTGTATGTGTTGGTTGTGTAATAGCCTTGATGATGTGTGTAGTAGTTGTTTTTTTATGCTGTGGTGTGTGTGTAAGCTGTATGTGTTAGTAGTGTGTGTTCTTCGTATGCTGTTGTTTGTGTGTAGAGTCTGTATGTGGTAGTGTGTGTGTTTTGTTATGCTGTGGTGATGTGTGTAAGCTGTTATGTGAATGTAGATAGTTGTGTGTTATGTATGCATGGTCGGTAGATAGCTCAAGCTAGTATGTGGTGTAGTGTGCTTGTTCGTTTTTTGCACTGCTGTGGGTGTGTGTTAAGCTGTAGTGTGTAGTGTGTGTGTTTTGTATGCTGTGTGGTGTGTGGTAAGCTGTATGTGTGTATGTTGTGTTTTTGTATGCATGTGGTGTGTGTGTAAGCTGTATGTGTGTAGTGTGTGTGTTTTTGTATGCTGTGGTGTGTGTGTAAGCTGTAATGTGTGTAGTGTGGTGTTGTATGCTGTGGTGGTTGTTGTAAGCTGTTAGGTGTGCAAGTGAATGGTGTCAGGCCCTTTTGTATGCTGTTGTGTGTGTGTAAGCTGTATGTGTGTAGTGCGAGCGAGTTTTTGTATGCTGTGAGCATGTGTGTGTAAGTTGTCCATGTTGGTACTTAGGTGTGTTTTTGTATGCTGTGGTGTGGTGTGTAAGCTGTACGTGTGCGAGTGAGTGTCGTTTTTATGCTGTGTGTCGACTGTAGGTGTGATGCAAAGTGGTATGTGTGTGTGAGTGCTGTGTGTTTTGATAGCGTGTGGTGTGTGTGTAGAGTATGTAGCTGTAGTGGTAGTGAGTGTGTTGTTTGTGTAGGCTTGGTGTGTGTTGTAAGTTGTGAGCGTGTGTTAGTTGCAGTGTGTATGTGTGTTTTGTATGCTGTGGTGTGTGTAGACGCTGTATGTGGTAGTGAGTGTGTGGTGTTTTGTATCTCGTTGTGTGTGTGTAAGCTGTATGTGGTAGTGGAGTGTGTTGTGTTTTCTGTACTGCTGTCTGGTTGTGTGTGTGAAGGCTGTATCGTTTAGTGACGTGTGTGTGTGTTTTGTGTATTCTGTGGCGTGTGTGTGCGTATAGTCTGTATGTGTGAGGTGATGTGTGGTCTTTGTTGTATGCTGTGGGTGTGTGTAAGCTGTATGTGTGTAGTGAGTGTGTTGTCTTTTTGTATGCTGTGGTGTGTGTGTAAAGCTTATGGTGGTAGTGAGTGGTGTGTGTTTTGTGATGCGTGGCTGTGTGTGTGTAAGTGTTGTCTGTAGTGAGTGTGTGTTTTTTTGTAGTGCTGTGGGTGTGTGTAATTTGTATGTGTGTAGTGAGTGGTGTTGTATGCTGTGGTGTGTGTGGTAAGTTGTATGTTGTGTAGTGAGTGTGGAGTGTATGAGTGAGTGCTGCTTGTGTGTGTGTAAGTTGTATGTGTGTAGTGAGTGGTGTTTTTGTATGCTGTGTGTGTGTTGTGAAGTTTTATGTGTGTAGTGATTAGTGTAGTTTTGTGTGAGTACTGTGGTCGTGTGTGTAAGTTGTATGTGTGTAGTGTGTGTTTTGTGTGATCGCTGTGGTGTGTGTGTATAATTGTATGCTGTGTAGTGATGTGTGTGTTTTTGTTTGGGGCTTTTGTGGGGCTCGTGTGTAAGCTTATGTGTTGTGAGTGTGTGTGTTTGTTTTATGCTGTGGGTGTGTTAACTGCTGTATCTGTGTAAGTGTGTGTGGTTTTTGTATCTGCTGGGTGTGTGGTAAGTTGTATGTGTGTAGTGAGTGTTGTGTGTTCTTTGTATGCTTTTGGGTGTTGTGTGTAAGTTGACTGTGTGTTGCTGTGTCGTTTTTGTCTATGCTTGTGTGATGTGTGAAGAGCGCTCTGTGTGTAGTGGAGTGTGTTTTTGTTTCTGTGTGTGTGTGCTTAAGCATGTCTATAGTTGTTCAGTGAGTGTGGGTGTTTTGTATGCTTTCGTGTGTGTACTGCTGTATGCGTCGTGTGAGTGGTGAGGTTGTTGCTTTTTGTAGCTTGTTGGTGTGTGGTAAGTTGTACTTGTGCGCCTAAGTGAGTGTGTTGCTTTGTTATAGACTGTATGGTGTGTGAGTGTAAGTGTATGTGTGTAGTGAGTGTTTGCGTGTGTTTTTGTCTCGCTTGGTGTGTAAGTTGTTGTGAGTGCTGATTGTTGTGTGTTTTTTGTATGCGTGGTGTGTGTGTAAGTTGTATGTGTGTAGTGATGTGTGTGTTTTTGTATGCTGTTGGTGTGTGTGTAAGTTGTAGTGTGTGTAGTGAGTGTGTTGTTTTTGATGCTGCTGGTGGTGTTGTGTAAATTGTATGTGTGTAGTGAGTGGTGTGTTTTTGTATGCTGTGGTGTGTGTGTAAGTTGTATTGTTAGTGAGTGTGTGTGTTTTGTATTGCTGTGGGTTGTGTGTAAGTTGTATGTGTGTAGTGGGTGTGTTTGTTTTTTATTGCTGTGTGTGATGTGTAATTTGTATGTGTGTAGTGAGTGGTGGTTTTTGTATGCGTGGTGTGTTGTGTTAAGTTGTATGTGTGTAGTGAGTGTGTGTTGTTTTTTGTATGTGTGGTAGTGTGTGTAAGCTGTGTGATTTGTGTCCAGTGATGTGTGTGTTTTTAAGTAGTGGCTGTTGGGTGTGAGTGTCAAGCTGTATGTGTGTCCCATTTGGGTAGTGGATGTGTGTTTTGTATGCTGTGGTGTGTGTTCGTAAGCTGTAGTGTGTAGTGAGTGTGTTGTTTTTGTATGCTGTGGTGTGTGTGAGGTAAGCTGTATGTTGTCTAGTGAGTGTTTGTTTTTGTATGCTTGTGTGTGTGTGTAAAGCTGTATGTGTGTAGTGAGTGTCGCTGGTGTTCTTTAGTATGGCCCTGTGTGTGATGGTGATGTAAGCTGTATGTGTGTAGTGAGTGTGTGTGTTTTTGTATGCCTCTGTGTGTGTGGAGCTAGCTGTATGTGTTAGCGTGAGGTGTGTGTTTTGGTATGCTGCTGGGTTCGCGACGCTAGCTGTATGTTGTGTAGTGAGGGGTGTGTTTTGGTTGATGCTGTGGTGTGTGTGTAAGCTTGTATGTGTGTAGTGAGTGTGTGTGTTTTTGGTCGCTAGATGCCTGTGTAGTGTGGCTGAAGCTGTATTGTGTATGAGTGGTGTGATGCTTTTGTATGCTGTGGTGATGTGTGTAAAGTTGTATGTGTGTCAGTGTGTGTGTTTGTTTGCTGTGGTGGTGTGTGTAAGTTTGTATGTGTGTAGTGAGTGTGTGTTTTGTATGCTGTGGTGTTGTGTAAGTTGTATGTGTGTAGTGTTGTTTTGTATGCTGGTGGGGTGTGTGTGTAAGTTTATGTGTGTAGTGAGTGTGTGTGTTTTTGTATGCTGTAGTGTTGTGTGTCAGGTTGTATCGTGTGTAGTGAGTGTGTGTGTTTCTTTCTATGCATGTGTGAGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7450:HG2_PB_pbsv_10203:HG3_PB_SVrefine2Falcon1Dovetail_6180:HG2_PB_SVrefine2Falcon1plusDovetail_12317;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_10203;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0783663;ClusterMaxSizeDiff=0.0783663;ClusterMaxEditDist=0.193195;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=4070;DistBack=133;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=177;REFWIDENED=9:35914241-35914417;PctSeqSimilarity=0.925;PctSizeSimilarity=0.944;PctRecOverlap=0.8875;SizeDiff=228;StartDistance=344;EndDistance=344;GTMatch=1;TruScore=91;MatchId=5625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:9:117:1/1:5:18:8:26:./.:0:0:0:0:0/0:40:0:0/1:57:36:.:4608:.
chr9	36467144	HG3_Ill_GATKHCSBGrefine_6840	G	GCAGCCTGGGTGACAAGAGTGAAACTCTGTCTCAAAAAAAAAAAAAAAAAAGGCATAAAGATGAAATTTAATAAAGAGAAGAGAAATTCCTGAATTAGCATACAAAAATATAGACATAATAAATCCAAGAATAGATTTTTTTTTTTTTTGAGACAAAATCTCGCTCTTGTCCCCCAGGCTGGAGTGCAATGGCGCGATCTCTGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCCCCGAGATAGCTGGGATTACAGGCGCCTGCCACCACGCTGGGCTAGTTTTGGCATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTCACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGATTACAGGCGTGAGCCACCACGCCTGGCTGAATACATTCTTTAAAAGACGATCATTTAAAAAATAATAGCAACTACAGCCAGGCGTGGTGGCTCATGCCTGTAATCCTAGCACTTCGGGAGGCCGAGGAGGATGGATCACGAGGTCAGAGTTCAAGACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGCTTGGTGGCAGTCGCCTGTAATCTCAGCTACTCAGGAGGCTGAGGCAGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7296:HG3_PB_pbsv_9954:HG4_PB_pbsv_10241:HG2_PB_PB10Xdip_31324:HG2_PB_pbsv_10212:HG2_PB_PB10Xdip_31325:HG3_Ill_MetaSV_5522:HG4_Ill_GATKHCSBGrefine_7075:HG3_Ill_GATKHCSBGrefine_6840:HG2_Ill_MetaSV_5340:HG2_Ill_GATKHCSBGrefine_6937:HG4_PB_HySA_14905:HG2_PB_HySA_18462:HG3_PB_HySA_15341:HG2_PB_SVrefine2Falcon1plusDovetail_12323:HG2_PB_SVrefine2PB10Xhap12_7456:HG2_PB_SVrefine2Falcon2Bionano_4838:HG4_Ill_SVrefine2DISCOVARDovetail_7394:HG3_Ill_SVrefine2DISCOVARDovetail_7624:HG4_PB_SVrefine2PBcRDovetail_5111:HG2_PB_SVrefine2PBcRplusDovetail_11523:HG2_Ill_SVrefine2DISCOVARplusDovetail_13510;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6937:HG2_Ill_MetaSV_5340:HG3_Ill_GATKHCSBGrefine_6840:HG4_Ill_GATKHCSBGrefine_7075;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0486815;ClusterMaxSizeDiff=0.0420339;ClusterMaxEditDist=0.25815;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=724;DistBack=-42;DistForward=22952;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=296;REFWIDENED=9:36466891-36467186;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5626.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:0:22:1:20:./.:0:0:0:0:1/1:0:20:1/1:6:107:.:722:.
chr9	36924756	HG2_PB_SVrefine2PB10Xhap12_7458	G	GGAAGGAAGGAAGGAAGGAAGGAAAAGAGAAAGGGAGGGAGGGAGGGAGGAAGGAAGGAAAGAAAGAAGGAAGGGAGAGAAAGAGAAGGAAGGAGGGAAGGAGGGAGGGAGAGACGGAGGGAGGGAAGGGGGAGGGAGGGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4840:HG2_Ill_breakscan11_4056:HG4_PB_HySA_14909:HG2_PB_HySA_18471:HG2_PB_SVrefine2Falcon1plusDovetail_12325:HG2_PB_pbsv_10214:HG4_PB_pbsv_10243:HG2_PB_HySA_18470:HG3_PB_pbsv_9957:HG3_PB_HySA_15345:HG4_Ill_GATKHCSBGrefine_7076:HG2_PB_PB10Xdip_31329:HG2_PB_PB10Xdip_31328:HG2_PB_HySA_18469:HG4_Ill_SVrefine2DISCOVARDovetail_7396:HG2_PB_SVrefine2PBcRplusDovetail_11525:HG2_PB_SVrefine2PB10Xhap12_7458:HG3_Ill_SVrefine2DISCOVARDovetail_7625:HG2_Ill_SVrefine2DISCOVARplusDovetail_13511:HG4_PB_SVrefine2PBcRDovetail_5113;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7458:HG2_PB_SVrefine2PBcRplusDovetail_11525:HG4_Ill_SVrefine2DISCOVARDovetail_7396;NumExactMatchSVs=3;ClusterMaxShiftDist=0.106383;ClusterMaxSizeDiff=0.106007;ClusterMaxEditDist=0.25;PBcalls=15;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=140;DistBack=-87;DistForward=-1;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=95;REFWIDENED=9:36924757-36924851;PctSeqSimilarity=0.9615;PctSizeSimilarity=0.9929;PctRecOverlap=0.4255;SizeDiff=1;StartDistance=-80;EndDistance=-80;GTMatch=0;TruScore=79;MatchId=5627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:39:1/1:2:17:1:18:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr9	37683821	HG2_PB_assemblyticsPBcR_26935	A	GTTCTGCAGAGTGTTGTGTGAGGGAGATGGAGTTGGCGGGTAGGCAGGGCCAGATCACAAAAGGCTTTGGGGGGAACGACAGGTAATACAG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13515:HG3_PB_assemblyticsfalcon_27608:HG2_PB_assemblyticsfalcon_27678:HG2_PB_assemblyticsPBcR_26935:HG2_PB_SVrefine2PBcRplusDovetail_11526:HG2_PB_SVrefine2PB10Xhap12_7459:HG2_PB_SVrefine2Falcon1plusDovetail_12326:HG3_PB_pbsv_9961:HG2_PB_pbsv_10216:HG2_Ill_GATKHC_16546:HG2_Ill_GATKHCSBGrefine_6940:HG4_Ill_GATKHC_16561:HG3_Ill_GATKHC_16506:HG2_Ill_GATKHC_16545:HG2_Ill_GATKHCSBGrefine_6939:HG2_Ill_250bpfermikitraw_13834:HG2_PB_HySA_18476:HG3_PB_HySA_15351:HG2_PB_PB10Xdip_31331:HG2_PB_PB10Xdip_31330:HG4_Ill_SVrefine2DISCOVARDovetail_7400:HG2_PB_SVrefine2Falcon2Bionano_4841;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12326:HG2_PB_SVrefine2PB10Xhap12_7459:HG2_PB_SVrefine2PBcRplusDovetail_11526:HG2_PB_assemblyticsPBcR_26935:HG2_PB_assemblyticsfalcon_27678;NumExactMatchSVs=5;ClusterMaxShiftDist=0.136364;ClusterMaxSizeDiff=0.11236;ClusterMaxEditDist=0.248649;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=90;DistBack=5;DistForward=68;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=551;REFWIDENED=9:37683610-37684160;PctSeqSimilarity=0.9967;PctSizeSimilarity=1;PctRecOverlap=0.3297;SizeDiff=0;StartDistance=61;EndDistance=61;GTMatch=0;TruScore=77;MatchId=5628.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:80:1/1:0:49:2:27:./.:0:0:0:0:0/1:8:11:./.:.:.:.:.:.
chr9	38303793	HG2_Ill_manta_2926	C	CATTTTATTTTATTTTATTTTATTTTATTTTACTTTATTTTATTTTATTTTATTTT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_31339:HG3_PB_pbsv_9967:HG2_PB_assemblyticsfalcon_27685:HG2_PB_pbsv_10221:HG4_PB_pbsv_10250:HG3_PB_HySA_15358:HG4_Ill_SVrefine2DISCOVARDovetail_7405:HG4_Ill_Krunchall_14405:HG2_PB_SVrefine2PBcRplusDovetail_11529:HG2_Ill_SVrefine2DISCOVARplusDovetail_13523:HG2_Ill_Krunchall_14164:HG2_Ill_250bpfermikitraw_13844:HG4_PB_SVrefine2PBcRDovetail_5115:HG4_Ill_GATKHC_16568:HG4_Ill_GATKHCSBGrefine_7083:HG3_Ill_SVrefine2DISCOVARDovetail_7636:HG3_Ill_Krunchall_13873:HG2_PB_SVrefine2PB10Xhap12_7463:HG2_Ill_manta_2926:HG2_Ill_GATKHC_16555:HG2_Ill_GATKHCSBGrefine_6945:HG3_Ill_scalpel_9923:HG3_Ill_Spiral_10840:HG3_Ill_GATKHC_16515:HG3_Ill_GATKHCSBGrefine_6846:HG3_Ill_FB_8963:HG3_Ill_150bpfermikitraw_13059:HG4_PB_HySA_14919:HG2_PB_HySA_18481:HG2_PB_PB10Xdip_31340;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6945:HG2_Ill_GATKHC_16555:HG2_Ill_manta_2926:HG2_PB_SVrefine2PB10Xhap12_7463:HG3_Ill_Krunchall_13873:HG3_Ill_SVrefine2DISCOVARDovetail_7636:HG4_Ill_GATKHCSBGrefine_7083:HG4_Ill_GATKHC_16568:HG4_PB_SVrefine2PBcRDovetail_5115;NumExactMatchSVs=9;ClusterMaxShiftDist=0.210526;ClusterMaxSizeDiff=0.210526;ClusterMaxEditDist=0.239316;PBcalls=12;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=55;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=9:38303794-38303828;PctSeqSimilarity=0.9573;PctSizeSimilarity=0.9167;PctRecOverlap=0.9016;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=5629.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:./.:1:8:0:2:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr9	38655894	HG2_Ill_svaba_12852	C	CAGGTCTCTTCCTATGAAAAATCTGTGCTGCTCTGTACAGCCACTCAGGGACACAGGCTTCTGGCACATTGTAACTGGGAGTCCTCTCCATGCAGCCACGGGATGAGGAAAGAGCCAGTAAAGAGCTTGTTGCTTCCACTCACATGCCATTACTAAGAACCTGTGCACACGGCCCCACTTAACCGTGACAGAGCTTGGGAAATGTCGTCCATCTCTGTGTCCAGGGAGAAGAGGAAGGAATGGGTATTGG	20	PASS	ClusterIDs=HG2_Ill_Spiral_725:HG4_PB_pbsv_10251:HG2_PB_PB10Xdip_31344:HG2_PB_PB10Xdip_31343:HG3_PB_pbsv_9970:HG4_Ill_svaba_12936:HG4_Ill_MetaSV_5571:HG4_Ill_GATKHCSBGrefine_7084:HG4_Ill_Cortex_3804:HG3_PB_SVrefine2PBcRDovetail_4699:HG3_Ill_svaba_13013:HG3_Ill_SVrefine2DISCOVARDovetail_7637:HG3_Ill_MetaSV_5525:HG3_Ill_GATKHCSBGrefine_6847:HG3_Ill_Cortex_3853:HG2_PB_SVrefine2PBcRplusDovetail_11530:HG2_PB_SVrefine2PB10Xhap12_7465:HG2_PB_SVrefine2Falcon1plusDovetail_12330:HG2_Ill_svaba_12852:HG2_Ill_SVrefine2DISCOVARplusDovetail_13524:HG2_Ill_MetaSV_5343:HG2_Ill_GATKHCSBGrefine_6947:HG2_Ill_Cortex_9298:HG2_10X_SVrefine210Xhap12_7303:HG2_PB_HySA_18483:HG3_PB_assemblyticsfalcon_27615:HG3_PB_SVrefine2Falcon1Dovetail_6182:HG4_Ill_Spiral_840:HG3_Ill_Spiral_10841;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7303:HG2_Ill_Cortex_9298:HG2_Ill_GATKHCSBGrefine_6947:HG2_Ill_MetaSV_5343:HG2_Ill_SVrefine2DISCOVARplusDovetail_13524:HG2_Ill_svaba_12852:HG2_PB_SVrefine2Falcon1plusDovetail_12330:HG2_PB_SVrefine2PB10Xhap12_7465:HG2_PB_SVrefine2PBcRplusDovetail_11530:HG3_Ill_Cortex_3853:HG3_Ill_GATKHCSBGrefine_6847:HG3_Ill_MetaSV_5525:HG3_Ill_SVrefine2DISCOVARDovetail_7637:HG3_Ill_svaba_13013:HG3_PB_SVrefine2PBcRDovetail_4699:HG4_Ill_Cortex_3804:HG4_Ill_GATKHCSBGrefine_7084:HG4_Ill_MetaSV_5571:HG4_Ill_svaba_12936;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0817121;ClusterMaxSizeDiff=0.077821;ClusterMaxEditDist=0.238636;PBcalls=11;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=249;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=9:38655895-38655896;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5630.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:./.:0:1:0:2:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr9	38735022	HG2_10X_SVrefine210Xhap12_7304	A	ACCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCTCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTC	20	PASS	ClusterIDs=HG2_PB_pbsv_10224:HG3_PB_pbsv_9971:HG3_PB_HySA_15363:HG2_PB_PB10Xdip_31346:HG2_PB_PB10Xdip_31345:HG3_PB_HySA_15362:HG2_Ill_breakscan11_4057:HG2_PB_SVrefine2PBcRplusDovetail_11531:HG3_Ill_GATKHC_16517:HG2_PB_HySA_18484:HG3_PB_assemblyticsfalcon_27616:HG3_PB_SVrefine2PBcRDovetail_4700:HG4_Ill_SVrefine2DISCOVARDovetail_7406:HG2_PB_SVrefine2PB10Xhap12_7466:HG2_PB_SVrefine2Falcon1plusDovetail_12331:HG2_Ill_SVrefine2DISCOVARplusDovetail_13525:HG2_10X_SVrefine210Xhap12_7304:HG4_PB_SVrefine2Falcon1Dovetail_6276:HG3_Ill_SVrefine2DISCOVARDovetail_7638:HG3_PB_HySA_15361;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7304:HG2_Ill_SVrefine2DISCOVARplusDovetail_13525:HG2_PB_SVrefine2Falcon1plusDovetail_12331:HG2_PB_SVrefine2PB10Xhap12_7466:HG4_Ill_SVrefine2DISCOVARDovetail_7406;NumExactMatchSVs=5;ClusterMaxShiftDist=0.19883;ClusterMaxSizeDiff=0.19883;ClusterMaxEditDist=0.27957;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=90;DistBack=79126;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=9:38735023-38735077;PctSeqSimilarity=0.9868;PctSizeSimilarity=0.989;PctRecOverlap=0.7582;SizeDiff=-1;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=91;MatchId=5631.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:1:22:0:23:./.:0:0:0:0:1/1:1:20:./.:.:.:.:.:.
chr9	38750730	HG4_Ill_SVrefine2DISCOVARDovetail_7407	T	TCAGGGACTATCGATAATTCTGTAGTGCCTGTCATACCTTACAAACTTTATGAAGCCACACACACACACAGAGACATATGTATGTGTGTGTATATATATGTCTTTATGAAGACACATATGTCTCTGTGTGTGTGTGTGGCTTCATAAAGTTTGTAAGGTATGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_31347:HG4_PB_pbsv_10254:HG3_PB_assemblyticsfalcon_27617:HG2_PB_pbsv_10225:HG3_PB_pbsv_9972:HG3_PB_SVrefine2Falcon1Dovetail_6183:HG4_PB_SVrefine2PBcRDovetail_5117:HG4_Ill_manta_2490:HG4_Ill_SVrefine2DISCOVARDovetail_7407:HG4_Ill_MetaSV_5572:HG4_Ill_GATKHCSBGrefine_7085:HG3_PB_SVrefine2PBcRDovetail_4701:HG3_Ill_Spiral_10842:HG3_Ill_SVrefine2DISCOVARDovetail_7639:HG3_Ill_MetaSV_5526:HG3_Ill_GATKHCSBGrefine_6849:HG2_PB_SVrefine2PBcRplusDovetail_11532:HG2_PB_SVrefine2PB10Xhap12_7467:HG2_Ill_manta_2927:HG2_Ill_SVrefine2DISCOVARplusDovetail_13526:HG2_Ill_MetaSV_5344:HG2_Ill_GATKHCSBGrefine_6948:HG2_Ill_250bpfermikitraw_13846:HG2_10X_SVrefine210Xhap12_7305:HG4_PB_SVrefine2Falcon1Dovetail_6277:HG2_PB_SVrefine2Falcon1plusDovetail_12332:HG2_PB_PB10Xdip_31348;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7305:HG2_Ill_250bpfermikitraw_13846:HG2_Ill_GATKHCSBGrefine_6948:HG2_Ill_MetaSV_5344:HG2_Ill_SVrefine2DISCOVARplusDovetail_13526:HG2_Ill_manta_2927:HG2_PB_SVrefine2PB10Xhap12_7467:HG2_PB_SVrefine2PBcRplusDovetail_11532:HG3_Ill_GATKHCSBGrefine_6849:HG3_Ill_MetaSV_5526:HG3_Ill_SVrefine2DISCOVARDovetail_7639:HG3_Ill_Spiral_10842:HG3_PB_SVrefine2PBcRDovetail_4701:HG4_Ill_GATKHCSBGrefine_7085:HG4_Ill_MetaSV_5572:HG4_Ill_SVrefine2DISCOVARDovetail_7407:HG4_Ill_manta_2490:HG4_PB_SVrefine2PBcRDovetail_5117;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.189349;PBcalls=13;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=162;DistBack=15669;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=9:38750731-38750739;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5632.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:1/1:0:9:0:11:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr9	38767760	HG2_Ill_GATKHCSBGrefine_6951	T	TAAGAAAGTACACTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_10256:HG3_PB_pbsv_9974:HG2_PB_pbsv_10227:HG3_Ill_MetaSV_5527:HG2_PB_HySA_18486:HG2_Ill_breakscan11_4058:HG2_PB_PB10Xdip_31349:HG2_PB_PB10Xdip_31350:HG4_PB_SVrefine2Falcon1Dovetail_6278:HG4_Ill_MetaSV_5573:HG3_PB_SVrefine2Falcon1Dovetail_6184:HG2_PB_SVrefine2PB10Xhap12_7469:HG2_Ill_GATKHCSBGrefine_6951:HG2_PB_SVrefine2PBcRplusDovetail_11534:HG2_Ill_MetaSV_5345;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6951:HG2_PB_SVrefine2PB10Xhap12_7469;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0650155;ClusterMaxSizeDiff=0.0617284;ClusterMaxEditDist=0.225225;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=316;DistBack=26;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=9:38767761-38767774;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5633.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:./.:7:21:0:26:./.:0:0:0:0:1/1:0:26:1/1:1:46:.:.:.
chr9	71827887	HG3_Ill_Krunchall_13919	T	TATGTATTAAGGTATAATACATAAGGTATAATACCTTATGTATTAAGGTATAATTTTAATTATGACATATTATACATAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7318:HG4_PB_pbsv_10291:HG2_PB_pbsv_10256:HG2_PB_PB10Xdip_31602:HG2_PB_PB10Xdip_31601:HG2_PB_HySA_18632:HG4_Ill_manta_2497:HG4_Ill_Krunchall_14444:HG4_Ill_GATKHC_16672:HG4_Ill_GATKHCSBGrefine_7126:HG4_Ill_Cortex_3806:HG4_Ill_250bpfermikitraw_13781:HG3_PB_assemblyticsfalcon_27632:HG3_Ill_manta_2403:HG3_Ill_Spiral_10872:HG3_Ill_Krunchall_13919:HG3_Ill_GATKHC_16601:HG3_Ill_GATKHCSBGrefine_6895:HG3_Ill_Cortex_3855:HG2_Ill_manta_2936:HG2_Ill_SpiralSDKrefine_17847:HG2_Ill_Krunchall_14204:HG2_Ill_GATKHC_16654:HG2_Ill_GATKHCSBGrefine_6993:HG2_Ill_Cortex_9303:HG2_Ill_250bpfermikitraw_13888:HG2_Ill_150bpfermikitraw_13043:HG3_PB_HySA_15554:HG2_Ill_breakscan11_4060:HG4_PB_SVrefine2PBcRDovetail_5142:HG3_PB_pbsv_10010:HG4_PB_SVrefine2Falcon1Dovetail_6296:HG4_Ill_SVrefine2DISCOVARDovetail_7420:HG3_PB_SVrefine2PBcRDovetail_4742:HG2_PB_SVrefine2PBcRplusDovetail_11563:HG2_PB_SVrefine2PB10Xhap12_7506:HG2_PB_SVrefine2Falcon2Bionano_4848:HG2_PB_SVrefine2Falcon1plusDovetail_12361;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13043:HG2_Ill_250bpfermikitraw_13888:HG2_Ill_Cortex_9303:HG2_Ill_GATKHCSBGrefine_6993:HG2_Ill_GATKHC_16654:HG2_Ill_Krunchall_14204:HG2_Ill_SpiralSDKrefine_17847:HG2_Ill_manta_2936:HG3_Ill_Cortex_3855:HG3_Ill_GATKHCSBGrefine_6895:HG3_Ill_GATKHC_16601:HG3_Ill_Krunchall_13919:HG3_Ill_Spiral_10872:HG3_Ill_manta_2403:HG3_PB_assemblyticsfalcon_27632:HG4_Ill_250bpfermikitraw_13781:HG4_Ill_Cortex_3806:HG4_Ill_GATKHCSBGrefine_7126:HG4_Ill_GATKHC_16672:HG4_Ill_Krunchall_14444:HG4_Ill_manta_2497;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0864198;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.317073;PBcalls=15;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=78;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=34;REFWIDENED=9:71827856-71827889;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5634.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:1/1:1:14:1:9:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr9	72618782	HG2_10X_SVrefine210Xhap12_7321	CGTTCTACCAGATGCCC	GACTCTTCTGAGGTTCTACCAGATGCCCTGAGTAGGCTGATCACTTTGGGTGATCAGAACTTCAACATCACCCAGGCCTGTGTGAGCTCTGGAAATTGTTCTGTTTACAGTTCCCCAGTCATTCTTTGCCTGACCTATAGGAATTCCATCCTATAAACTCATGGCT	20	PASS	ClusterIDs=HG3_PB_pbsv_10011:HG4_PB_assemblyticsfalcon_27132:HG2_PB_pbsv_10259:HG4_Ill_svaba_12971:HG4_PB_pbsv_10294:HG4_Ill_manta_2499:HG4_Ill_GATKHCSBGrefine_7128:HG4_Ill_250bpfermikitraw_13789:HG4_Ill_150bpfermikitraw_13201:HG3_Ill_svaba_13045:HG3_Ill_manta_2404:HG3_Ill_Spiral_10875:HG3_Ill_GATKHCSBGrefine_6897:HG2_Ill_svaba_12888:HG2_Ill_manta_2937:HG2_Ill_SpiralSDKrefine_17852:HG2_Ill_GATKHCSBGrefine_6995:HG2_PB_PB10Xdip_31607:HG2_PB_PB10Xdip_31606:HG4_PB_SVrefine2PBcRDovetail_5146:HG4_PB_SVrefine2Falcon1Dovetail_6299:HG4_Ill_SVrefine2DISCOVARDovetail_7425:HG4_Ill_Cortex_3807:HG3_PB_assemblyticsfalcon_27636:HG3_PB_SVrefine2PBcRDovetail_4743:HG3_PB_SVrefine2Falcon1Dovetail_6204:HG3_Ill_SVrefine2DISCOVARDovetail_7653:HG3_Ill_Cortex_3857:HG2_PB_assemblyticsfalcon_27703:HG2_PB_assemblyticsPBcR_26963:HG2_PB_SVrefine2PBcRplusDovetail_11564:HG2_PB_SVrefine2PB10Xhap12_7508:HG2_PB_SVrefine2Falcon2Bionano_4849:HG2_PB_SVrefine2Falcon1plusDovetail_12363:HG2_Ill_SVrefine2DISCOVARplusDovetail_13546:HG2_Ill_Cortex_9305:HG2_10X_SVrefine210Xhap12_7321:HG4_Ill_MetaSV_5589:HG3_Ill_MetaSV_5540:HG2_Ill_MetaSV_5360;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7321:HG2_Ill_Cortex_9305:HG2_Ill_SVrefine2DISCOVARplusDovetail_13546:HG2_PB_SVrefine2Falcon1plusDovetail_12363:HG2_PB_SVrefine2Falcon2Bionano_4849:HG2_PB_SVrefine2PB10Xhap12_7508:HG2_PB_SVrefine2PBcRplusDovetail_11564:HG2_PB_assemblyticsPBcR_26963:HG2_PB_assemblyticsfalcon_27703:HG3_Ill_Cortex_3857:HG3_Ill_SVrefine2DISCOVARDovetail_7653:HG3_PB_SVrefine2Falcon1Dovetail_6204:HG3_PB_SVrefine2PBcRDovetail_4743:HG3_PB_assemblyticsfalcon_27636:HG4_Ill_Cortex_3807:HG4_Ill_SVrefine2DISCOVARDovetail_7425:HG4_PB_SVrefine2Falcon1Dovetail_6299:HG4_PB_SVrefine2PBcRDovetail_5146:HG4_PB_assemblyticsfalcon_27132;NumExactMatchSVs=19;ClusterMaxShiftDist=0.190164;ClusterMaxSizeDiff=0.190164;ClusterMaxEditDist=0.315436;PBcalls=17;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=12;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=149;DistBack=15133;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=9:72618799-72618781;PctSeqSimilarity=0.9115;PctSizeSimilarity=0.9262;PctRecOverlap=0.8424;SizeDiff=11;StartDistance=-16;EndDistance=0;GTMatch=0;TruScore=89;MatchId=5635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:20:0:36:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr9	74367375	HG2_PB_SVrefine2PB10Xhap12_7517	A	AGGAAGGAAGGAAGGAAGGAAGGGGGAGGGTAGGGGGAGGAGAGGGGGAGGGAGGGGGAGGGGAGGGGAGGGGAGGGGAGGGAGGGGAGGGAGGGAAGGGAGGGGAGAGAGGGAGAGAAGGAAGTAAGGAAGTTAGGAGGGAAGGGAGGAAGGAAGGAGGGAAGGGAGGAAGGAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6210:HG4_PB_HySA_15093:HG4_PB_pbsv_10303:HG2_PB_PB10Xdip_31625:HG2_PB_PB10Xdip_31624:HG2_PB_HySA_18662:HG3_PB_HySA_15576:HG2_Ill_breakscan11_4062:HG2_PB_pbsv_10270:HG2_Ill_SVrefine2DISCOVARplusDovetail_13557:HG3_PB_pbsv_10021:HG4_PB_SVrefine2PBcRDovetail_5154:HG4_Ill_SVrefine2DISCOVARDovetail_7430:HG3_PB_SVrefine2PBcRDovetail_4752:HG2_PB_SVrefine2PBcRplusDovetail_11571:HG2_PB_SVrefine2PB10Xhap12_7517:HG2_PB_SVrefine2Falcon2Bionano_4857:HG2_10X_SVrefine210Xhap12_7327:HG2_PB_SVrefine2Falcon1plusDovetail_12370:HG4_PB_SVrefine2Falcon1Dovetail_6307;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7327:HG2_PB_SVrefine2Falcon2Bionano_4857:HG2_PB_SVrefine2PB10Xhap12_7517:HG2_PB_SVrefine2PBcRplusDovetail_11571:HG3_PB_SVrefine2PBcRDovetail_4752:HG4_PB_SVrefine2PBcRDovetail_5154;NumExactMatchSVs=6;ClusterMaxShiftDist=0.141176;ClusterMaxSizeDiff=0.0941176;ClusterMaxEditDist=0.245014;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=174;DistBack=-57;DistForward=-1;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=59;REFWIDENED=9:74367376-74367434;PctSeqSimilarity=0.9898;PctSizeSimilarity=0.9885;PctRecOverlap=0.8686;SizeDiff=2;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=94;MatchId=5638.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:2:18:0:9:./.:0:0:0:0:1/1:0:13:./.:.:.:.:.:.
chr9	74544776	HG2_PB_SVrefine2PBcRplusDovetail_11572	T	TAAACTTAAAGATATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_31626:HG4_PB_pbsv_10305:HG2_PB_pbsv_10272:HG4_PB_assemblyticsfalcon_27150:HG3_PB_assemblyticsfalcon_27651:HG2_PB_assemblyticsfalcon_27720:HG3_PB_HySA_15578:HG3_PB_pbsv_10023:HG4_PB_SVrefine2PBcRDovetail_5155:HG2_10X_SVrefine210Xhap12_7328:HG3_Ill_MetaSV_5544:HG3_PB_SVrefine2PBcRDovetail_4753:HG3_Ill_GATKHCSBGrefine_6908:HG2_PB_SVrefine2PB10Xhap12_7518:HG4_PB_SVrefine2Falcon1Dovetail_6308:HG3_PB_SVrefine2Falcon1Dovetail_6211:HG2_PB_SVrefine2PBcRplusDovetail_11572:HG4_Ill_MetaSV_5593:HG2_PB_SVrefine2Falcon2Bionano_4858:HG2_PB_SVrefine2Falcon1plusDovetail_12371:HG2_Ill_GATKHCSBGrefine_7003:HG2_PB_HySA_18665:HG4_PB_HySA_15098;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_11572:HG3_PB_SVrefine2Falcon1Dovetail_6211:HG4_PB_SVrefine2Falcon1Dovetail_6308;NumExactMatchSVs=3;ClusterMaxShiftDist=0.160475;ClusterMaxSizeDiff=0.160475;ClusterMaxEditDist=0.28165;PBcalls=18;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=333;DistBack=16094;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=9:74544777-74544792;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:./.:0:41:0:2:./.:0:0:0:0:1/1:0:12:1/1:1:71:.:.:.
chr9	74644834	HG2_PB_SVrefine2PB10Xhap12_7519	A	AAACCACCCACCCACCCAGCCAACCAACTGATCAACCAACCAGCCAATCACTTGCCCACCCAGGCAACCACTCCCCCACCCACCCACCCACCCAGCCAGCCAATCAACCACCCACACATTCACCCACCCACCCAACCAACCAGCTACCCACCCATCCACCCACCCATCGAGCCAACCAGCCAACCATCCACCCACCCACCG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6212:HG4_Ill_Cortex_3810:HG3_Ill_Cortex_3859:HG2_Ill_Cortex_9308:HG3_PB_pbsv_10024:HG2_PB_pbsv_10273:HG4_Ill_GATKHCSBGrefine_7138:HG3_Ill_GATKHCSBGrefine_6909:HG2_Ill_GATKHCSBGrefine_7004:HG2_PB_PB10Xdip_31628:HG2_PB_PB10Xdip_31627:HG4_Ill_MetaSV_5594:HG3_Ill_MetaSV_5545:HG2_Ill_MetaSV_5363:HG4_PB_pbsv_10306:HG4_Ill_250bpfermikitraw_13801:HG4_Ill_150bpfermikitraw_13214:HG2_PB_HySA_18666:HG4_PB_SVrefine2Falcon1Dovetail_6309:HG4_PB_SVrefine2PBcRDovetail_5156:HG4_Ill_SVrefine2DISCOVARDovetail_7431:HG3_PB_SVrefine2PBcRDovetail_4754:HG3_Ill_SVrefine2DISCOVARDovetail_7663:HG2_PB_SVrefine2PBcRplusDovetail_11573:HG2_PB_SVrefine2PB10Xhap12_7519:HG2_PB_SVrefine2Falcon2Bionano_4859:HG2_Ill_SVrefine2DISCOVARplusDovetail_13559:HG2_10X_SVrefine210Xhap12_7329:HG2_PB_SVrefine2Falcon1plusDovetail_12372;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7329:HG2_Ill_SVrefine2DISCOVARplusDovetail_13559:HG2_PB_SVrefine2Falcon2Bionano_4859:HG2_PB_SVrefine2PB10Xhap12_7519:HG2_PB_SVrefine2PBcRplusDovetail_11573:HG3_Ill_SVrefine2DISCOVARDovetail_7663:HG3_PB_SVrefine2PBcRDovetail_4754:HG4_Ill_SVrefine2DISCOVARDovetail_7431:HG4_PB_SVrefine2PBcRDovetail_5156;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0447761;ClusterMaxSizeDiff=0.0347395;ClusterMaxEditDist=0.167488;PBcalls=14;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=200;DistBack=5151;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=197;REFWIDENED=9:74644835-74645031;PctSeqSimilarity=0.9713;PctSizeSimilarity=0.995;PctRecOverlap=0.6915;SizeDiff=1;StartDistance=-61;EndDistance=-61;GTMatch=0;TruScore=88;MatchId=5640.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:21:0:16:./.:0:0:0:0:1/1:0:14:./.:.:.:.:.:.
chr9	74904914	HG2_PB_assemblyticsfalcon_27722	CAAATCT	TTTTTTTTTTTTTTTTTTTTAATGTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTACGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTTGCTATTGTGAATAGTGCCGCAATAAACATACATGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGAGGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGCCTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTATAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCTTTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCGCACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCATGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12373:HG2_PB_pbsv_10274:HG2_PB_assemblyticsfalcon_27722:HG2_PB_PB10Xdip_31629:HG2_PB_SVrefine2Falcon2Bionano_4860:HG2_PB_SVrefine2PB10Xhap12_7520:HG2_PB_SVrefine2PBcRplusDovetail_11574;NumClusterSVs=7;ExactMatchIDs=HG2_PB_assemblyticsfalcon_27722;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0315601;ClusterMaxSizeDiff=0.0315601;ClusterMaxEditDist=0.103465;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6046;DistBack=-7;DistForward=34921;DistMin=-7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7702;REFWIDENED=9:74904921-74895173;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9972;PctRecOverlap=0.9984;SizeDiff=-17;StartDistance=1;EndDistance=7;GTMatch=0;TruScore=99;MatchId=5641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:40:0|1:29:0:0:25:./.:0:0:0:0:0/1:44:11:0/1:212:719:.:6184:.
chr9	75231533	HG2_Ill_MetaSV_5364	T	TAAGAACAGAGCAGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6213:HG2_PB_HySA_18670:HG4_PB_pbsv_10309:HG4_PB_HySA_15104:HG2_PB_pbsv_10276:HG4_PB_assemblyticsfalcon_27155:HG2_PB_assemblyticsfalcon_27726:HG4_PB_SVrefine2Falcon1Dovetail_6310:HG3_Ill_MetaSV_5546:HG2_PB_SVrefine2Falcon1plusDovetail_12374:HG2_Ill_MetaSV_5364:HG4_Ill_MetaSV_5595;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_MetaSV_5364:HG2_PB_SVrefine2Falcon1plusDovetail_12374;NumExactMatchSVs=2;ClusterMaxShiftDist=0.133122;ClusterMaxSizeDiff=0.133122;ClusterMaxEditDist=0.234548;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=316;DistBack=1873;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=9:75231534-75231546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5642.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:31:0|1:28:0:0:34:./.:0:0:0:0:0/1:19:14:0/1:10:31:.:.:.
chr9	75542969	HG4_Ill_GATKHCSBGrefine_7139	C	CTAAAGTAGCCACATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGTGGAGCTTGCAAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAACAAAAAAAAAAAAACAAAAAAAAAAAAAATAAA	20	PASS	ClusterIDs=HG2_PB_HySA_18672:HG2_PB_pbsv_10277:HG2_PB_HySA_18674:HG2_PB_HySA_18673:HG3_PB_pbsv_10029:HG3_PB_SVrefine2PBcRDovetail_4756:HG2_PB_assemblyticsfalcon_27727:HG2_PB_SVrefine2Falcon1plusDovetail_12375:HG4_Ill_MetaSV_5596:HG4_Ill_GATKHCSBGrefine_7139:HG3_Ill_MetaSV_5547:HG3_Ill_GATKHCSBGrefine_6911:HG2_Ill_MetaSV_5365:HG2_Ill_GATKHCSBGrefine_7005:HG3_PB_HySA_15583;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7005:HG2_Ill_MetaSV_5365:HG3_Ill_GATKHCSBGrefine_6911:HG3_Ill_MetaSV_5547:HG4_Ill_GATKHCSBGrefine_7139:HG4_Ill_MetaSV_5596;NumExactMatchSVs=6;ClusterMaxShiftDist=0.12931;ClusterMaxSizeDiff=0.12931;ClusterMaxEditDist=0.216968;PBcalls=9;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=349;DistBack=53391;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=9:75542970-75542985;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5643.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:25:0|1:28:1:0:26:./.:0:0:0:0:0/1:38:17:0/1:6:32:.:.:.
chr9	76070217	HG2_PB_PB10Xdip_31634	T	CCCTCCCCTCCCCTCCCCTCCCCTCCTCTCCCCACTCCCCTCCTCTCCCCCCTCCCCTCCCCTCCCTCCCCTCCCCTGCCCCCACCCCTC	20	PASS	ClusterIDs=HG2_PB_pbsv_10282:HG3_PB_pbsv_10033:HG3_PB_HySA_15590:HG4_PB_HySA_15114:HG2_PB_HySA_18685:HG2_PB_PB10Xdip_31635:HG4_PB_pbsv_10316:HG2_PB_PB10Xdip_31634:HG4_PB_SVrefine2PBcRDovetail_5160:HG2_PB_SVrefine2PB10Xhap12_7525:HG3_PB_SVrefine2PBcRDovetail_4758:HG2_PB_assemblyticsfalcon_27732:HG4_PB_assemblyticsfalcon_27161:HG2_PB_SVrefine2PBcRplusDovetail_11578:HG4_Ill_SVrefine2DISCOVARDovetail_7435:HG2_10X_SVrefine210Xhap12_7333;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_31634:HG2_PB_PB10Xdip_31635;NumExactMatchSVs=2;ClusterMaxShiftDist=0.228916;ClusterMaxSizeDiff=0.216867;ClusterMaxEditDist=0.347826;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=89;DistBack=-31;DistForward=29;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=9:76070213-76070247;PctSeqSimilarity=0.9783;PctSizeSimilarity=0.957;PctRecOverlap=0.957;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=96;MatchId=5644.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:1/1:4:19:1:22:./.:0:0:0:0:0/1:1:9:./.:.:.:.:.:.
chr9	76723944	HG3_Ill_GATKHC_16638	T	TAAATACAAGTCAATAGTGTGGACCTTATCTTTGCATGTTAGCAGTTAAGGTAGATTCCTCACCAGATAATTTG	20	PASS	ClusterIDs=HG2_PB_HySA_18689:HG4_PB_HySA_15120:HG3_PB_pbsv_10036:HG4_PB_pbsv_10318:HG2_Ill_breakscan11_4063:HG2_PB_PB10Xdip_31637:HG2_PB_PB10Xdip_31636:HG4_Ill_svaba_12997:HG4_Ill_manta_2505:HG4_Ill_GATKHC_16716:HG4_Ill_GATKHCSBGrefine_7146:HG4_Ill_250bpfermikitraw_13813:HG3_Ill_svaba_13073:HG3_Ill_manta_2412:HG3_Ill_Krunchall_13960:HG3_Ill_GATKHC_16639:HG3_Ill_GATKHCSBGrefine_6916:HG3_Ill_250bpfermikitraw_13542:HG2_Ill_svaba_12911:HG2_Ill_SpiralSDKrefine_17868:HG2_Ill_GATKHC_16700:HG2_Ill_GATKHCSBGrefine_7013:HG2_Ill_250bpfermikitraw_13923:HG2_PB_pbsv_10283:HG4_PB_SVrefine2PBcRDovetail_5161:HG4_PB_SVrefine2Falcon1Dovetail_6315:HG4_Ill_svaba_12996:HG4_Ill_SVrefine2DISCOVARDovetail_7440:HG4_Ill_Krunchall_14490:HG4_Ill_GATKHC_16715:HG4_Ill_GATKHCSBGrefine_7145:HG4_Ill_250bpfermikitraw_13812:HG3_PB_SVrefine2PBcRDovetail_4760:HG3_PB_SVrefine2Falcon1Dovetail_6217:HG3_Ill_svaba_13072:HG3_Ill_Spiral_10900:HG3_Ill_SVrefine2DISCOVARDovetail_7672:HG3_Ill_GATKHC_16638:HG3_Ill_GATKHCSBGrefine_6915:HG3_Ill_250bpfermikitraw_13541:HG2_PB_SVrefine2PBcRplusDovetail_11579:HG2_PB_SVrefine2PB10Xhap12_7526:HG2_PB_SVrefine2Falcon2Bionano_4864:HG2_PB_SVrefine2Falcon1plusDovetail_12379:HG2_Ill_svaba_12910:HG2_Ill_manta_2942:HG2_Ill_SVrefine2DISCOVARplusDovetail_13568:HG2_Ill_Krunchall_14242:HG2_Ill_GATKHC_16699:HG2_Ill_GATKHCSBGrefine_7012:HG2_Ill_250bpfermikitraw_13922:HG2_10X_SVrefine210Xhap12_7334;NumClusterSVs=52;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7334:HG2_Ill_250bpfermikitraw_13922:HG2_Ill_GATKHCSBGrefine_7012:HG2_Ill_GATKHC_16699:HG2_Ill_Krunchall_14242:HG2_Ill_SVrefine2DISCOVARplusDovetail_13568:HG2_Ill_manta_2942:HG2_Ill_svaba_12910:HG2_PB_SVrefine2Falcon1plusDovetail_12379:HG2_PB_SVrefine2Falcon2Bionano_4864:HG2_PB_SVrefine2PB10Xhap12_7526:HG2_PB_SVrefine2PBcRplusDovetail_11579:HG3_Ill_250bpfermikitraw_13541:HG3_Ill_GATKHCSBGrefine_6915:HG3_Ill_GATKHC_16638:HG3_Ill_SVrefine2DISCOVARDovetail_7672:HG3_Ill_Spiral_10900:HG3_Ill_svaba_13072:HG3_PB_SVrefine2Falcon1Dovetail_6217:HG3_PB_SVrefine2PBcRDovetail_4760:HG4_Ill_250bpfermikitraw_13812:HG4_Ill_GATKHCSBGrefine_7145:HG4_Ill_GATKHC_16715:HG4_Ill_Krunchall_14490:HG4_Ill_SVrefine2DISCOVARDovetail_7440:HG4_Ill_svaba_12996:HG4_PB_SVrefine2Falcon1Dovetail_6315:HG4_PB_SVrefine2PBcRDovetail_5161;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0945946;ClusterMaxSizeDiff=0.0789474;ClusterMaxEditDist=0.304636;PBcalls=15;Illcalls=36;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=22;HG3count=15;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=73;DistBack=43839;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=9:76723945-76723972;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5645.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:52:1/1:1:14:2:35:./.:0:0:0:0:1/1:0:61:./.:.:.:.:.:.
chr9	76812672	HG2_Ill_250bpfermikitraw_13925	G	GAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTC	20	PASS	ClusterIDs=HG2_PB_pbsv_10284:HG2_PB_assemblyticsfalcon_27736:HG3_PB_pbsv_10037:HG2_PB_PB10Xdip_31638:HG2_PB_PB10Xdip_31639:HG3_Ill_Spiral_10902:HG3_Ill_GATKHCSBGrefine_6917:HG3_Ill_150bpfermikitraw_13120:HG2_Ill_GATKHCSBGrefine_7014:HG2_Ill_250bpfermikitraw_13925:HG2_Ill_150bpfermikitraw_13079:HG4_Ill_GATKHCSBGrefine_7147:HG2_PB_HySA_18690:HG3_PB_HySA_15596;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13079:HG2_Ill_250bpfermikitraw_13925:HG2_Ill_GATKHCSBGrefine_7014:HG3_Ill_150bpfermikitraw_13120:HG3_Ill_GATKHCSBGrefine_6917:HG3_Ill_Spiral_10902;NumExactMatchSVs=6;ClusterMaxShiftDist=0.126984;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.222222;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=9:76812671-76812675;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5646.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:68:1/1:2:37:2:17:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr9	76860921	HG3_Ill_manta_2413	A	AGTCAGTTTCACCCCATTTCCGCATATAACTGCCACATGTGGTTTTTAAGTCCCTAGGTTGAATGTATC	20	PASS	ClusterIDs=HG2_PB_HySA_18691:HG4_PB_pbsv_10320:HG3_PB_HySA_15597:HG3_PB_pbsv_10038:HG4_PB_HySA_15122:HG2_PB_pbsv_10285:HG4_PB_SVrefine2Falcon1Dovetail_6316:HG4_Ill_svaba_12999:HG4_Ill_Krunchall_14493:HG4_Ill_GATKHC_16718:HG4_Ill_GATKHCSBGrefine_7148:HG4_Ill_250bpfermikitraw_13815:HG3_PB_SVrefine2PBcRDovetail_4761:HG3_PB_SVrefine2Falcon1Dovetail_6218:HG3_Ill_svaba_13076:HG3_Ill_manta_2413:HG3_Ill_SVrefine2DISCOVARDovetail_7673:HG3_Ill_Krunchall_13964:HG3_Ill_GATKHC_16642:HG3_Ill_GATKHCSBGrefine_6918:HG3_Ill_250bpfermikitraw_13545:HG3_Ill_150bpfermikitraw_13122:HG2_PB_SVrefine2Falcon2Bionano_4865:HG2_PB_SVrefine2Falcon1plusDovetail_12380:HG2_Ill_svaba_12914:HG2_Ill_SVrefine2DISCOVARplusDovetail_13569:HG2_Ill_Krunchall_14245:HG2_Ill_GATKHC_16703:HG2_Ill_GATKHCSBGrefine_7015:HG2_Ill_250bpfermikitraw_13927:HG2_10X_SVrefine210Xhap12_7335;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7335:HG2_Ill_250bpfermikitraw_13927:HG2_Ill_GATKHCSBGrefine_7015:HG2_Ill_GATKHC_16703:HG2_Ill_Krunchall_14245:HG2_Ill_SVrefine2DISCOVARplusDovetail_13569:HG2_Ill_svaba_12914:HG2_PB_SVrefine2Falcon1plusDovetail_12380:HG2_PB_SVrefine2Falcon2Bionano_4865:HG3_Ill_150bpfermikitraw_13122:HG3_Ill_250bpfermikitraw_13545:HG3_Ill_GATKHCSBGrefine_6918:HG3_Ill_GATKHC_16642:HG3_Ill_Krunchall_13964:HG3_Ill_SVrefine2DISCOVARDovetail_7673:HG3_Ill_manta_2413:HG3_Ill_svaba_13076:HG3_PB_SVrefine2Falcon1Dovetail_6218:HG3_PB_SVrefine2PBcRDovetail_4761:HG4_Ill_250bpfermikitraw_13815:HG4_Ill_GATKHCSBGrefine_7148:HG4_Ill_GATKHC_16718:HG4_Ill_Krunchall_14493:HG4_Ill_svaba_12999:HG4_PB_SVrefine2Falcon1Dovetail_6316;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0851064;ClusterMaxSizeDiff=0.0699301;ClusterMaxEditDist=0.287671;PBcalls=11;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=68;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=9:76860922-76860989;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:38:0|1:28:4:6:32:./.:0:0:0:0:0/1:14:18:./.:.:.:.:.:.
chr9	77314289	HG3_Ill_Krunchall_13969	A	AGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7341:HG2_PB_pbsv_10290:HG3_PB_HySA_15601:HG4_Ill_svaba_13002:HG4_Ill_scalpel_9589:HG4_Ill_manta_2506:HG4_Ill_Krunchall_14499:HG4_Ill_GATKHC_16724:HG4_Ill_GATKHCSBGrefine_7149:HG4_Ill_FB_9031:HG4_Ill_250bpfermikitraw_13820:HG4_Ill_150bpfermikitraw_13233:HG3_Ill_svaba_13079:HG3_Ill_scalpel_9986:HG3_Ill_Spiral_10907:HG3_Ill_Krunchall_13969:HG3_Ill_GATKHC_16646:HG3_Ill_GATKHCSBGrefine_6921:HG3_Ill_FB_9015:HG3_Ill_250bpfermikitraw_13551:HG3_Ill_150bpfermikitraw_13127:HG2_Ill_svaba_12919:HG2_Ill_scalpel_9859:HG2_Ill_Krunchall_14253:HG2_Ill_GATKHC_16709:HG2_Ill_GATKHCSBGrefine_7017:HG2_Ill_FB_9055:HG2_Ill_250bpfermikitraw_13932:HG2_Ill_150bpfermikitraw_13085:HG2_PB_assemblyticsfalcon_27747:HG2_PB_PB10Xdip_31652:HG2_PB_PB10Xdip_31651:HG2_PB_HySA_18698:HG3_PB_pbsv_10042:HG4_PB_HySA_15127:HG4_PB_SVrefine2PBcRDovetail_5164:HG4_Ill_SVrefine2DISCOVARDovetail_7445:HG3_PB_SVrefine2PBcRDovetail_4764:HG3_PB_SVrefine2Falcon1Dovetail_6221:HG3_Ill_SVrefine2DISCOVARDovetail_7677:HG2_PB_SVrefine2PBcRplusDovetail_11582:HG2_PB_SVrefine2PB10Xhap12_7529:HG2_PB_SVrefine2Falcon2Bionano_4867:HG2_Ill_SVrefine2DISCOVARplusDovetail_13575:HG4_PB_assemblyticsfalcon_27173;NumClusterSVs=45;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13085:HG2_Ill_250bpfermikitraw_13932:HG2_Ill_FB_9055:HG2_Ill_GATKHCSBGrefine_7017:HG2_Ill_GATKHC_16709:HG2_Ill_Krunchall_14253:HG2_Ill_scalpel_9859:HG2_Ill_svaba_12919:HG3_Ill_150bpfermikitraw_13127:HG3_Ill_250bpfermikitraw_13551:HG3_Ill_FB_9015:HG3_Ill_GATKHCSBGrefine_6921:HG3_Ill_GATKHC_16646:HG3_Ill_Krunchall_13969:HG3_Ill_Spiral_10907:HG3_Ill_scalpel_9986:HG3_Ill_svaba_13079:HG4_Ill_150bpfermikitraw_13233:HG4_Ill_250bpfermikitraw_13820:HG4_Ill_FB_9031:HG4_Ill_GATKHCSBGrefine_7149:HG4_Ill_GATKHC_16724:HG4_Ill_Krunchall_14499:HG4_Ill_manta_2506:HG4_Ill_scalpel_9589:HG4_Ill_svaba_13002;NumExactMatchSVs=26;ClusterMaxShiftDist=0.285714;ClusterMaxSizeDiff=0.285714;ClusterMaxEditDist=0.304762;PBcalls=15;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=1;SVLEN=57;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=63;REFWIDENED=9:77314240-77314302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:4:23:1:17:./.:0:0:0:0:1/1:1:30:./.:.:.:.:.:.
chr9	77587415	HG2_PB_SVrefine2PBcRplusDovetail_11585	G	GGCATCATACTACTTGACTTCAAAATATATTACAAGCCTATAGTAACCAAGACAGCATGGCATTAGTTTAAAAACAGAAACACAGACCAGTGGAGCGAAACAAAGAACACAGAAAGAAATCCATGTATTTACAGCTGACTGATTTTTGACAAAGGTGTGAAGAACATACATTGGGTGAAGAACACCTTCTTCAATAAATTGTGCTAGGAAAACTGGATATACATATGCAGAAGAATGAAAGAAGACCCCCTACCTCTCACCACAACCAAAAACCAGTTCAAGATGGAGTAAATACTTAACGTTAAGTCCTGAAACTATAGAACTACTAGAAGAAAACATATGAGAAACACCAGGACATTGATCTAGGCAAAGATTTTATGGCTAGGACCTCAAAAGCACAGGCAACAAAAATAAAATTAGATGAGTGGGACCATACTAAATTAAAAAGCTTCTGCACAGCAAAGGAAACAATAAACAGACTGAAGAGATAGCCTGTTGAATGGGAGAAAATATCTGCAAACTATTTCTCTGATAAAGGACTAATAACCAGAATATATAGGAAGTCCAAGAACAGTAAAACAACAACAAATAATCTCATTAAAAAGTGGGCAAAGAACATGAATAGACATTTCTTTTTTTTTTTTTTTACATTTCTGATTTTATTTAAAATACAAACATAGTAGATAGGACACATACTACATAATGATGATTGTTTAATAACATAGAAGGTAAATTAATATAGCCAAGGCACTGAGTTGGGAAGAAAGTGTGTGCAGTTACTGGCCTCTTTATTTTCTATGTGACTCCCTTTCCTTTTTCTGTGTCTTCATATGTATGTAAATATTTCTTTTTTTATTATTATTGTACTTTAAGTTCTAGGGTAAATGTGCACAACGTGCAGGTTTGATATATAGGTATACATGTGCCATGTTGGTTTGCTGCACCGATCCACTCATCATTTACATTAGGTATTTCTCCTAATGCTATGCCTCCCCCAGCCCCCAACCCCCGACAGGCCCTAGTGTGTTATGTTCCCCACCCTGTGTCCAAGTGATCTCACTGTTCAATTCCCACCTATGAGTAAGAACATGTGGTGTTTGGTTTTCTGTCCTTGTGATAGTTTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCTACAAAGGACATGAACTCATCCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCGCATTTTCTTAATCCAGTCTATCATTGATGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTACAATAAACATACATGTGCACGTGCCTTTATAGTAGTATGATTTATAATCCTTTAGGTATATACCCAGTAATGGGATTGCTGGGTCAAATGGTAATTCTAGTTCTAGATCCTTGAGGAATCGCCACACTATCTTCCACAATGGTTGAACTAATTTACACTCCCAAGTGTAAAAGCTTTCCTATTTCTCCACATCCTCTCCAGCATCTATCATTTCCTGACTTTTTAATGACTGCCATTCTAACTGGCATGAGATGGCATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGACCAGTGATGATGAGCATTTTTTCATGTGTCTGTTGGCTGCATAGATGTCTTCTTTTGAGATGTGTCTGTTCATATCCTTTGCCCACTTTTTGATGGGGTTGTTTTTTTCTTGTAGATGTGTTTGAGTTCATTGTAGATTCTGCATATTATCCCTTTGTCAGATGGGTAGATTGCAAAAATTTTCTCCCATTCTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCTATTTTGGCTTTTGTTGCTATTGCTTTTGGTGTTTTAGTCATGAAGTCCTTGCCCATGCCTATGTCCTGAAAGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATAGTTTTAGGTCTAACATTTAAATCTTTAATCCATCTTGAATTAATTTTTGTATAAGGTGTAAGGAAGGGAGCCAGTTTCAGGTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTCCCCCATTTCTTGTTCAGGTTTATCAAAGATCAGATGGTTGTAGATTTGTGGCGTTATTTCTGAGGCCTCTGTTCTTTTCCATTGTCTATATATCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTATCGCCTTGCAGTATAGTTTGAAGTCAGGTAGTGTGATACCTTCAGCTTTGCTCTTTTTGCTTAGGATTGTCTTGGCAATGCAGGCTCTTTTTTGGTTCCATGTGAACTTTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGAACTGAATCTGCAAATTATCTTGGGCAGTATGGGCATTTTCACGATATTGATTCTTCCTATCCATGAGCATAGAATATTCTTCCATTTGTTTGTGTCCTCTTTTATTTCGTTGAGCAGTGGTCTGTAGTTCTCCTTGAAGAGGTCCTTCATGTTCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGTAGCAATTGTGAATAGGAGTTCACTCATGATTTGGCTGTTAATGGTGTATAGGAATGCTTGTGATTTTTGCACATTGATTTTGTATCCTGAGACGTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAACGGGGTTTTCTAAATATACAAACATGTCATCTGCAAACAGGGACAATTTGACTTCCTCATTTCCTAATTAAACACCCTTTATTTCTTTCTCTTGCCTGACTGCCCTGGCCAGTACTTCCAACACTATGTTGAATAGCAGTAGTGAGAGAGGGCATCCTTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAAATAGCCCTTATTATGTTGAGATATGTTCCATCAATACCTATTGAGTTTTTAGCATGAAGGGCTGAATTTTGCCAAAGGCCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTCGTCACTGGTTCTGTTATGTGATGGATTACGTTTATTGATTTGTGTATGTTGAACCAGACTTGCATCCCAGGGATGAAGCCGACTTGATGGTGGTGGATAAGCTTTTTGATGTGCTGCTAGATTCAGTTTGCCAGTATTTTATTGAGGATTTTTGCATGGATGTTCATCAGGGATATTGGTCTAAAATTCCCTTTTTTTGTTGTTGTCTCTGCCAGGCCTTGGTATCAGGATGAAGTTTGCCTCATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGCTCCTCTTTGTGCCACTGGTAGAATTCGGCTATGAATCCGTCTATTCCTGGACTTTTTTTGGTTGGTAGGCTATTAATTATTGCCTCAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTAGTTTAGTCTTGGGAGGGTGTATGTGTCCAGAAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTTTATAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATTGGTGGTGATATCCCCTTTATCATTTTTATT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4064:HG2_PB_pbsv_10293:HG4_PB_HySA_15129:HG2_PB_PB10Xdip_31654:HG2_PB_HySA_18703:HG2_PB_HySA_18702:HG4_PB_pbsv_10326:HG4_PB_SVrefine2Falcon1Dovetail_6320:HG4_Ill_SVrefine2DISCOVARDovetail_7450:HG2_10X_SVrefine210Xhap12_7345:HG4_PB_SVrefine2PBcRDovetail_5166:HG2_PB_SVrefine2PBcRplusDovetail_11585:HG2_PB_SVrefine2PB10Xhap12_7532:HG3_PB_SVrefine2PBcRDovetail_4767:HG2_PB_SVrefine2Falcon1plusDovetail_12385:HG3_PB_SVrefine2Falcon1Dovetail_6224;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7532:HG2_PB_SVrefine2PBcRplusDovetail_11585:HG4_PB_SVrefine2PBcRDovetail_5166;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0524285;ClusterMaxSizeDiff=0.0524285;ClusterMaxEditDist=0.142444;PBcalls=13;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=3667;DistBack=63086;DistForward=73742;DistMin=63086;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=9:77587416-77587420;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9997;PctRecOverlap=0.9995;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5649.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:49:0|1:21:0:0:32:./.:0:0:0:0:0/1:26:15:0/1:132:343:.:3583:.
chr9	77834226	HG2_PB_PB10Xdip_31655	C	CCAGTGCACTGCAGTCCAGCCTGGGTGACAGAGTGAGACTCAATGTCCAAAAAAAAAAAAAAAGAGATGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5167:HG2_PB_PB10Xdip_31656:HG2_PB_PB10Xdip_31655:HG2_PB_HySA_18705:HG4_PB_HySA_15132:HG4_PB_pbsv_10329;NumClusterSVs=6;ExactMatchIDs=HG2_PB_PB10Xdip_31655:HG2_PB_PB10Xdip_31656;NumExactMatchSVs=2;ClusterMaxShiftDist=0.205128;ClusterMaxSizeDiff=0.205128;ClusterMaxEditDist=0.24359;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=69;DistBack=26;DistForward=22146;DistMin=26;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=149;REFWIDENED=9:77834159-77834307;PctSeqSimilarity=0.9691;PctSizeSimilarity=0.9452;PctRecOverlap=0.6301;SizeDiff=-4;StartDistance=25;EndDistance=25;GTMatch=0;TruScore=84;MatchId=5650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:19:0|1:20:1:2:16:./.:0:0:0:0:./.:1:0:./.:.:.:.:.:.
chr9	78895782	HG4_Ill_GATKHCSBGrefine_7156	T	TAAAAAAGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_10298:HG4_PB_assemblyticsfalcon_27183:HG4_PB_pbsv_10334:HG4_PB_HySA_15140:HG2_PB_HySA_18715:HG2_PB_SVrefine2Falcon1plusDovetail_12388:HG2_PB_assemblyticsfalcon_27760:HG2_Ill_breakscan11_4065:HG4_PB_HySA_15139:HG3_PB_SVrefine2Falcon1Dovetail_6228:HG4_PB_SVrefine2Falcon1Dovetail_6324:HG4_Ill_MetaSV_5601:HG4_Ill_GATKHCSBGrefine_7156:HG2_Ill_GATKHCSBGrefine_7023;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7023:HG4_Ill_GATKHCSBGrefine_7156:HG4_Ill_MetaSV_5601;NumExactMatchSVs=3;ClusterMaxShiftDist=0.103333;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.203554;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=296;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=9:78895783-78895792;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:23:0|1:31:1:0:18:./.:0:0:0:0:0/1:25:20:./.:.:.:.:.:.
chr9	78952052	HG3_PB_HySA_15611	G	GAGAAGAATAATTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6326:HG2_PB_pbsv_10300:HG4_PB_pbsv_10336:HG4_PB_HySA_15141:HG4_PB_assemblyticsfalcon_27185:HG3_PB_pbsv_10053:HG3_PB_HySA_15611:HG2_Ill_breakscan11_4066:HG3_PB_SVrefine2Falcon1Dovetail_6231:HG3_PB_SVrefine2PBcRDovetail_4771:HG2_PB_SVrefine2Falcon2Bionano_4872;NumClusterSVs=11;ExactMatchIDs=HG3_PB_HySA_15611;NumExactMatchSVs=1;ClusterMaxShiftDist=0.159126;ClusterMaxSizeDiff=0.152411;ClusterMaxEditDist=0.221566;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=30078;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=9:78952053-78952065;PctSeqSimilarity=0.9831;PctSizeSimilarity=0.9726;PctRecOverlap=0.9757;SizeDiff=9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=5652.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:18:./.:15:14:14:4:./.:0:0:0:0:0/1:24:8:0/1:11:30:.:.:.
chr9	78966423	HG2_Ill_250bpfermikitraw_13943	A	AGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7024:HG4_PB_HySA_15142:HG4_Ill_250bpfermikitraw_13830:HG2_Ill_250bpfermikitraw_13943;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13943:HG4_Ill_250bpfermikitraw_13830;NumExactMatchSVs=2;ClusterMaxShiftDist=0.179104;ClusterMaxSizeDiff=0.179104;ClusterMaxEditDist=0.276923;PBcalls=1;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=66;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=9:78966422-78966427;PctSeqSimilarity=0.8841;PctSizeSimilarity=0.7895;PctRecOverlap=0.7922;SizeDiff=-16;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=82;MatchId=5653.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:25:./.:9:20:5:3:./.:0:0:0:0:0/1:23:10:./.:.:.:.:.:.
chr9	79154524	HG2_Ill_SVrefine2DISCOVARplusDovetail_13587	CA	TGTATATATACGTATATATGTGTATATATACGTATATATAAATATATATACGTATATATAAACATATATACGTATATATACACATATATACGTATATATACGTATATATATGCAT	20	PASS	ClusterIDs=HG2_PB_HySA_18718:HG2_PB_SVrefine2PBcRplusDovetail_11589:HG2_PB_SVrefine2PB10Xhap12_7539:HG2_PB_SVrefine2Falcon2Bionano_4873:HG2_Ill_SVrefine2DISCOVARplusDovetail_13587:HG3_PB_SVrefine2PBcRDovetail_4772:HG4_Ill_MetaSV_5603:HG4_PB_pbsv_10339:HG3_PB_HySA_15615:HG4_PB_HySA_15145:HG2_PB_HySA_18719:HG2_PB_PB10Xdip_31674:HG2_PB_PB10Xdip_31673:HG2_PB_SVrefine2Falcon1plusDovetail_12390:HG4_PB_SVrefine2PBcRDovetail_5173:HG3_PB_pbsv_10055:HG4_PB_SVrefine2Falcon1Dovetail_6330:HG4_Ill_SVrefine2DISCOVARDovetail_7455:HG3_Ill_SVrefine2DISCOVARDovetail_7693:HG2_Ill_manta_2948:HG2_Ill_SpiralSDKrefine_17879:HG3_PB_SVrefine2Falcon1Dovetail_6232:HG4_Ill_manta_2509:HG4_Ill_GATKHCSBGrefine_7158:HG2_PB_SVrefine2PB10Xhap12_7538:HG2_Ill_GATKHCSBGrefine_7025:HG4_Ill_GATKHC_16738:HG3_Ill_150bpfermikitraw_13141:HG2_Ill_GATKHC_16723:HG2_Ill_breakscan11_4067:HG2_PB_pbsv_10302;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13587:HG2_PB_SVrefine2Falcon2Bionano_4873:HG2_PB_SVrefine2PB10Xhap12_7539:HG2_PB_SVrefine2PBcRplusDovetail_11589;NumExactMatchSVs=4;ClusterMaxShiftDist=0.361233;ClusterMaxSizeDiff=0.361233;ClusterMaxEditDist=0.394619;PBcalls=18;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=6;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=113;DistBack=-3560;DistForward=-2;DistMin=-3560;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=9:79154485-79154523;PctSeqSimilarity=0.9903;PctSizeSimilarity=0.9912;PctRecOverlap=0.6404;SizeDiff=1;StartDistance=40;EndDistance=41;GTMatch=1;TruScore=87;MatchId=5654.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:1/1:0:25:0:16:./.:0:0:0:0:0/1:6:41:./.:.:.:.:.:.
chr9	79451283	HG4_PB_pbsv_10341	T	TTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGCAGTCTCGCTCTGATCCCCCAGTGGCTGGAGTGCTCACTCGGCGGATCTCGGCCTTCACTGCCCAAGCTCCGCCTCCCGGGTTCCACGCCATTTCCTGCCTCAGACCTCCCCAAGTAGCTGGGACTACAGCGCCGCCACGCCCGGCTATATTTTTTTGTACTTTCTTAGTAGAGACGGGGTTTCACGTTCTTAGCCGATCTCGTTCTCTCGATCTTCCCTTGACCTCGTTGATCCGGCCCGCCCTCGGGCTCCCAAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCGGCCACAAAAAATCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4068:HG2_PB_pbsv_10305:HG4_PB_pbsv_10341:HG3_PB_SVrefine2Falcon1Dovetail_6233:HG4_PB_HySA_15146;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_10341;NumExactMatchSVs=1;ClusterMaxShiftDist=0.083815;ClusterMaxSizeDiff=0.0809249;ClusterMaxEditDist=0.1875;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=359;DistBack=1;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=9:79451284-79451284;PctSeqSimilarity=0.931;PctSizeSimilarity=0.9415;PctRecOverlap=0.9359;SizeDiff=21;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=93;MatchId=5655.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:38:0|1:41:4:1:29:./.:0:0:0:0:0/1:33:12:0/1:6:10:.:.:.
chr9	79583155	HG3_PB_pbsv_10061	G	GAAAAAAAAAAGCTTTGAGGCCGGTTTGCCGCGGTGGCTCACAGCCTGTAAAATCCAGCACTTTGGGAGGCCAGAGGCGGGCGGATCACGAGGTCAGATGAGAATCGAGACCATCCCGGCTAAAAACGGTGAATAACCCGTCTCTAGCTAAAAATAGCAAAAAAATTAGCCGAGGCGTAGTGGCGGGCGCCTGTAGTCCGCAGCTACTTGGGCAGGCTGAGGCAGAGAAATGCGTGAACCCGGGAGGCGAGCTTGCAAGTGAGCCGAGAATCCGCGCCACTGCACTCGCAGCCTGGGCGACAGAGCGAGACCTGCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_18721:HG3_PB_SVrefine2PBcRDovetail_4776:HG2_PB_pbsv_10306:HG2_Ill_breakscan11_4069:HG3_PB_pbsv_10061:HG2_Ill_MetaSV_5370:HG2_PB_SVrefine2Falcon2Bionano_4876:HG3_PB_HySA_15619;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_10061;NumExactMatchSVs=1;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.246667;ClusterMaxEditDist=0.285714;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=336;DistBack=25053;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=9:79583156-79583172;PctSeqSimilarity=0.9452;PctSizeSimilarity=0.9494;PctRecOverlap=0.9466;SizeDiff=17;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=5656.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:31:1|0:7:25:25:3:./.:0:0:0:0:0/1:26:9:0/1:5:7:.:.:.
chr9	79655858	HG2_Ill_GATKHC_16726	T	TGTGTATATACATATGTATATACACATATATATATGTGTATATACATATGTATATACACATATATATATGTGTATATACATATGTATATACAC	20	PASS	ClusterIDs=HG3_PB_pbsv_10062:HG3_Ill_GATKHC_16663:HG2_PB_pbsv_10307:HG3_Ill_GATKHCSBGrefine_6930:HG2_Ill_GATKHC_16726:HG2_Ill_GATKHCSBGrefine_7027;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7027:HG2_Ill_GATKHC_16726:HG3_Ill_GATKHCSBGrefine_6930:HG3_Ill_GATKHC_16663;NumExactMatchSVs=4;ClusterMaxShiftDist=0.18;ClusterMaxSizeDiff=0.14;ClusterMaxEditDist=0.29;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=92;DistBack=-1;DistForward=17822;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=119;REFWIDENED=9:79655753-79655871;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:22:./.:16:9:4:14:./.:0:0:0:0:0/1:13:33:./.:.:.:.:.:.
chr9	80042515	HG2_Ill_GATKHC_16731	A	AAAGATGACGAGGAGGACATGAGTGTTCCACCGATACTGTCCCCAACCTGACAGAGAAGTGGCTGTGAGGGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11593:HG2_PB_PB10Xdip_31677:HG2_PB_SVrefine2PB10Xhap12_7543:HG3_PB_SVrefine2PBcRDovetail_4777:HG3_PB_pbsv_10064:HG2_PB_HySA_18726:HG2_PB_pbsv_10310:HG3_Ill_SVrefine2DISCOVARDovetail_7696:HG3_Ill_Krunchall_13985:HG3_Ill_GATKHC_16670:HG3_Ill_GATKHCSBGrefine_6934:HG3_Ill_250bpfermikitraw_13567:HG2_PB_SVrefine2Falcon2Bionano_4878:HG2_PB_SVrefine2Falcon1plusDovetail_12394:HG2_Ill_Krunchall_14266:HG2_Ill_GATKHC_16731:HG2_Ill_GATKHCSBGrefine_7031:HG2_Ill_250bpfermikitraw_13948;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13948:HG2_Ill_GATKHCSBGrefine_7031:HG2_Ill_GATKHC_16731:HG2_Ill_Krunchall_14266:HG2_PB_SVrefine2Falcon1plusDovetail_12394:HG2_PB_SVrefine2Falcon2Bionano_4878:HG3_Ill_250bpfermikitraw_13567:HG3_Ill_GATKHCSBGrefine_6934:HG3_Ill_GATKHC_16670:HG3_Ill_Krunchall_13985:HG3_Ill_SVrefine2DISCOVARDovetail_7696;NumExactMatchSVs=11;ClusterMaxShiftDist=0.356589;ClusterMaxSizeDiff=0.356589;ClusterMaxEditDist=0.4;PBcalls=9;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=71;DistBack=34855;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=71;REFWIDENED=9:80042516-80042586;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5658.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:20:0|1:14:4:1:17:./.:0:0:0:0:0/1:16:20:./.:.:.:.:.:.
chr9	80067525	HG3_Ill_MetaSV_5554	A	ATGGAAGTGTGTCAGTGGTGTGTGTGGAGGTATATGTGTGTGTGCTGTGCATATGTGTATGTCTGTGGTGTGTATGTGTGTGTGGTGTGCTTATGTGTATGTGTATGGTGTGTGTGTGGTGTGTGTATGTGTGTGGTGTATGTGTGTGGTGCATGTGTGTGGTTTGTGTCTGTGTGTGTGGCGTGTATGTGTATGTGTGTGGTGTGTTTGTGGTATGTGTGTATGTGTATGGTGTGTATGTGTATGTGTGTGGTGTGTCTGTGTGGTGTGTATGTGTGTGGTGTGTATGTGTGTGGTGTGTATGTGTGTGTGGTATGTGTGTACGTGTGGTGTGTATGTGTGTGGTGTGTGTGGTATGTGTGTGTTGTGTGGTGTGTGTGTATGTGTGTGGTGTGTGTGTAGTATCTGTGTATGTGTGGTGTGGTGTGTGGTATGTGTGTAGTGTGTTTATGTATGTGTGGGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5177:HG2_PB_PB10Xdip_31678:HG2_PB_PB10Xdip_31679:HG2_Ill_MetaSV_5371:HG2_PB_SVrefine2PB10Xhap12_7545:HG4_Ill_MetaSV_5604:HG3_Ill_MetaSV_5554:HG3_PB_pbsv_10065:HG2_PB_pbsv_10311:HG4_PB_pbsv_10343:HG3_PB_SVrefine2Falcon1Dovetail_6235:HG4_PB_SVrefine2Falcon1Dovetail_6332:HG3_PB_SVrefine2PBcRDovetail_4778:HG2_PB_SVrefine2PB10Xhap12_7544:HG3_Ill_SVrefine2DISCOVARDovetail_7697:HG2_PB_SVrefine2Falcon2Bionano_4879:HG2_Ill_SVrefine2DISCOVARplusDovetail_13592:HG2_PB_SVrefine2PBcRplusDovetail_11594:HG2_PB_SVrefine2Falcon1plusDovetail_12395;NumClusterSVs=19;ExactMatchIDs=HG3_Ill_MetaSV_5554:HG4_Ill_MetaSV_5604;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0920502;ClusterMaxSizeDiff=0.0878661;ClusterMaxEditDist=0.206967;PBcalls=14;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=462;DistBack=-2;DistForward=0;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=59;REFWIDENED=9:80067469-80067527;PctSeqSimilarity=0.9957;PctSizeSimilarity=0.9957;PctRecOverlap=0.9957;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:36:1/1:0:19:0:8:./.:0:0:0:0:1/1:0:21:1/1:2:133:.:.:.
chr9	81195339	HG4_Ill_FB_9047	T	TATGGAAGCTAAGAGGAAGAATAGAAACTGCCTCCATTTCATCAATCTGCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4070:HG2_PB_pbsv_10314:HG3_PB_SVrefine2Falcon1Dovetail_6237:HG3_PB_pbsv_10068:HG3_PB_assemblyticsfalcon_27699:HG2_PB_assemblyticsfalcon_27777:HG4_PB_SVrefine2PBcRDovetail_5180:HG4_Ill_svaba_13025:HG4_Ill_scalpel_9608:HG4_Ill_SVrefine2DISCOVARDovetail_7467:HG4_Ill_Krunchall_14524:HG4_Ill_GATKHC_16755:HG4_Ill_GATKHCSBGrefine_7166:HG4_Ill_FB_9047:HG4_Ill_Cortex_3813:HG4_Ill_250bpfermikitraw_13843:HG4_Ill_150bpfermikitraw_13254:HG4_CG_vcfBeta_6622:HG3_PB_SVrefine2PBcRDovetail_4781:HG3_Ill_svaba_13109:HG3_Ill_scalpel_10003:HG3_Ill_Spiral_10927:HG3_Ill_SVrefine2DISCOVARDovetail_7703:HG3_Ill_Krunchall_13993:HG3_Ill_GATKHC_16680:HG3_Ill_GATKHCSBGrefine_6937:HG3_Ill_FB_9028:HG3_Ill_Cortex_3862:HG3_Ill_250bpfermikitraw_13575:HG3_Ill_150bpfermikitraw_13154:HG3_CG_vcfBeta_5607:HG2_PB_SVrefine2PBcRplusDovetail_11596:HG2_PB_SVrefine2PB10Xhap12_7547:HG2_PB_SVrefine2Falcon2Bionano_4882:HG2_PB_SVrefine2Falcon1plusDovetail_12397:HG2_Ill_svaba_12941:HG2_Ill_scalpel_9874:HG2_Ill_SpiralSDKrefine_17890:HG2_Ill_SVrefine2DISCOVARplusDovetail_13597:HG2_Ill_Krunchall_14273:HG2_Ill_GATKHC_16741:HG2_Ill_GATKHCSBGrefine_7034:HG2_Ill_FB_9070:HG2_Ill_Cortex_9319:HG2_Ill_250bpfermikitraw_13956:HG2_Ill_150bpfermikitraw_13106:HG2_CG_vcfBeta_5878:HG2_10X_SVrefine210Xhap12_7364:HG2_PB_PB10Xdip_31686:HG2_PB_PB10Xdip_31685;NumClusterSVs=50;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7364:HG2_CG_vcfBeta_5878:HG2_Ill_150bpfermikitraw_13106:HG2_Ill_250bpfermikitraw_13956:HG2_Ill_Cortex_9319:HG2_Ill_FB_9070:HG2_Ill_GATKHCSBGrefine_7034:HG2_Ill_GATKHC_16741:HG2_Ill_Krunchall_14273:HG2_Ill_SVrefine2DISCOVARplusDovetail_13597:HG2_Ill_SpiralSDKrefine_17890:HG2_Ill_scalpel_9874:HG2_Ill_svaba_12941:HG2_PB_SVrefine2Falcon1plusDovetail_12397:HG2_PB_SVrefine2Falcon2Bionano_4882:HG2_PB_SVrefine2PB10Xhap12_7547:HG2_PB_SVrefine2PBcRplusDovetail_11596:HG3_CG_vcfBeta_5607:HG3_Ill_150bpfermikitraw_13154:HG3_Ill_250bpfermikitraw_13575:HG3_Ill_Cortex_3862:HG3_Ill_FB_9028:HG3_Ill_GATKHCSBGrefine_6937:HG3_Ill_GATKHC_16680:HG3_Ill_Krunchall_13993:HG3_Ill_SVrefine2DISCOVARDovetail_7703:HG3_Ill_Spiral_10927:HG3_Ill_scalpel_10003:HG3_Ill_svaba_13109:HG3_PB_SVrefine2PBcRDovetail_4781:HG4_CG_vcfBeta_6622:HG4_Ill_150bpfermikitraw_13254:HG4_Ill_250bpfermikitraw_13843:HG4_Ill_Cortex_3813:HG4_Ill_FB_9047:HG4_Ill_GATKHCSBGrefine_7166:HG4_Ill_GATKHC_16755:HG4_Ill_Krunchall_14524:HG4_Ill_SVrefine2DISCOVARDovetail_7467:HG4_Ill_scalpel_9608:HG4_Ill_svaba_13025:HG4_PB_SVrefine2PBcRDovetail_5180;NumExactMatchSVs=42;ClusterMaxShiftDist=0.141414;ClusterMaxSizeDiff=0.121212;ClusterMaxEditDist=0.269231;PBcalls=13;Illcalls=33;TenXcalls=1;CGcalls=3;PBexactcalls=6;Illexactcalls=32;TenXexactcalls=1;CGexactcalls=3;HG2count=22;HG3count=16;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=50;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=9:81195340-81195342;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5661.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:21:1:24:./.:0:0:0:0:1/1:0:64:./.:.:.:.:.:.
chr9	81297748	HG2_PB_PB10Xdip_31687	T	TTTCCTTTTCCTTCCCCTCTTCCCTTCTTCTCTTCCCCCTTCCCTTCTTCTCTTCTCCCCTTCCCTTCTTATCTTCCCTTCTCTCCCCCTCCCTTCCCTCCCCTTCTTCTCCCCCCACCCCCTCCCTCCCTTTCTTCCCTCCTCTCCCCTTCTTCCCTCCCGTCCCTTTCTTCCCTCCCCTCCCCTTCTTCCCTCCCCTCCCCCCTCTTCTTCCCTCCCCTCCCCTTCTTCCCTCCCCTCCCCTTCTTCCCTCCCTCCCCTTCTTCCCTCCCCTCCCCCCTCTTCTTCCCTCCCCTCCCCTTCTTCCCTCCCTCCCCTTCTTCCCTCCCTTGCCTTCCCTCCCTTGCCTTCCTTCCCTTCTTCCCTTCCTTCCCTTGCCTTCGTTCCCTTCTTCCCTTCGTTCCCTTCTTCCCTTCCCTTCCTTTGTTCCCTTCCTTTCTTCCCTTCCCTTCCTTCCCTTCCCTTCCTTTCTCCCTTCCTTTCTTCCCTTCCCTTCCTCTCTTCCTTCCCTTCCCTTCCTCTCTTCCCTTCCTCTCTTCCCTTCCTCTCTTCCCTTCCTCTCTTCCGTTCCTCTCTTCCCTTCCTCTCTTCCCTTCCTCTCTTCCCTTCCCTTCCTCTCTTCCCTTCCCTTCCTTTCTTCCCTTCCTTCCCTCCCTTCCCTTCCCTCCCCTCCTTTCCTTCCCTTCCCTCCCCTCCTTTCCTTCCCCTCCCTTCCTCTCCTCCTTCCCTTCCCTCCCTCTCCTCCTTCCCTTCCCTCCCTCTCCTCCTTCCCTTCCCTCCCTCTCCTCCTTTCCTTCCCTCCCTCTCCTCCTTCCCTTCCCTCCCTCCCCTCTTTCCCTTCCCTCCCTCCCCTCCTTCCCTTCCCTCCCTCCCTCCCTCCCTTCCTTCCCTTCCCTCCCTTCCCTCCTTCCCTCCCTTCCCTCCTTCCCTCCTTCCCTCCCTTCCCTCCTTCCCTCCCTTCCCTCCTTCCCTTCCCTCCCTCCCCTCCTTCCCTTCCTTCTCTCCCCTCCTTCCCTTCCTTCTCTCCCCTCCTTCCCTTCCTTCCCTCCCCTCCTTCCCTTCCTTCCCTCCCCTCCTTCCCTTCCTTCCCTCCCCTCCCTCCCCTTCCTCCCCTCCCCTCCCTCCCCTCCCCTCCCTCCCCTCCTTCCCTTCCTTCCCTCCCCTCCCTCCCCTCCCTCCCCTCCCCTCCCTCCCCTCCCCTCCCTCCCCTCCTTCCCTTCCTTCCCTCCCCTCCTTCTCCCCCTTCCCTCCTTCTCCCCCTTCCCTCCTTCTCCCCCTTCCCTCCTTCTCCCCCTTCCCTCCTTCTCCCCCTTCCCTCC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_31687:HG2_PB_pbsv_10315:HG3_PB_HySA_15627:HG3_PB_pbsv_10069:HG3_PB_assemblyticsfalcon_27700:HG2_PB_assemblyticsfalcon_27778:HG4_PB_pbsv_10348:HG2_PB_HySA_18734:HG4_PB_HySA_15154:HG4_PB_SVrefine2Falcon1Dovetail_6334:HG4_PB_SVrefine2PBcRDovetail_5181:HG3_PB_SVrefine2Falcon1Dovetail_6238:HG2_PB_SVrefine2PBcRplusDovetail_11597:HG2_PB_SVrefine2Falcon1plusDovetail_12398:HG2_PB_SVrefine2Falcon2Bionano_4883:HG3_PB_SVrefine2PBcRDovetail_4782:HG2_PB_SVrefine2PB10Xhap12_7548:HG2_PB_PB10Xdip_31688;NumClusterSVs=18;ExactMatchIDs=HG2_PB_PB10Xdip_31687:HG2_PB_PB10Xdip_31688;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0767123;ClusterMaxSizeDiff=0.0727984;ClusterMaxEditDist=0.231335;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1318;DistBack=39822;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=9:81297749-81297751;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9985;PctRecOverlap=0.9985;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5662.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:./.:0:20:0:4:./.:0:0:0:0:1/1:1:9:0/1:21:102:.:1382:.
chr9	81596118	HG2_Ill_MetaSV_5373	T	TAAGAAATACAATGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5373:HG2_PB_pbsv_10318:HG2_PB_assemblyticsfalcon_27784:HG2_Ill_breakscan11_4071:HG2_PB_PB10Xdip_31690:HG2_PB_PB10Xdip_31689:HG2_PB_SVrefine2PB10Xhap12_7550:HG2_PB_SVrefine2Falcon2Bionano_4885:HG4_Ill_MetaSV_5606:HG2_PB_SVrefine2Falcon1plusDovetail_12401;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_MetaSV_5373:HG2_PB_SVrefine2Falcon1plusDovetail_12401;NumExactMatchSVs=2;ClusterMaxShiftDist=0.256849;ClusterMaxSizeDiff=0.253425;ClusterMaxEditDist=0.321244;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=320;DistBack=-1;DistForward=19;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=9:81596119-81596134;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:38:0|1:38:6:1:29:./.:0:0:0:0:0/1:32:9:0/1:6:32:.:.:.
chr9	83407583	HG2_Ill_GATKHCSBGrefine_7047	T	TAAAAATTTTATTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_18756:HG3_PB_assemblyticsfalcon_27719:HG4_PB_pbsv_10363:HG2_PB_pbsv_10330:HG4_PB_HySA_15177:HG2_PB_PB10Xdip_31698:HG2_PB_SVrefine2PB10Xhap12_7558:HG4_PB_SVrefine2PBcRDovetail_5186:HG4_PB_SVrefine2Falcon1Dovetail_6342:HG4_Ill_manta_2518:HG4_Ill_MetaSV_5611:HG4_Ill_GATKHCSBGrefine_7179:HG3_PB_SVrefine2Falcon1Dovetail_6245:HG2_PB_SVrefine2Falcon2Bionano_4889:HG2_Ill_GATKHCSBGrefine_7047:HG2_Ill_MetaSV_5378;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7047:HG2_PB_SVrefine2Falcon2Bionano_4889:HG3_PB_SVrefine2Falcon1Dovetail_6245:HG4_Ill_GATKHCSBGrefine_7179:HG4_Ill_MetaSV_5611:HG4_Ill_manta_2518:HG4_PB_SVrefine2Falcon1Dovetail_6342:HG4_PB_SVrefine2PBcRDovetail_5186;NumExactMatchSVs=8;ClusterMaxShiftDist=0.216028;ClusterMaxSizeDiff=0.216028;ClusterMaxEditDist=0.247387;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=307;DistBack=46;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=9:83407584-83407598;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5664.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:30:0|1:33:0:0:28:./.:0:0:0:0:0/1:19:19:0/1:8:26:.:.:.
chr9	83608734	HG2_Ill_GATKHCSBGrefine_7051	G	GTATATATATACACACACACACACACACACAACAGGGTGTGTGTGTATATATATATATATATATACACACACACCCTGTTGTGTGTGTGTGTGTGTGTGTATATA	20	PASS	ClusterIDs=HG2_PB_pbsv_10334:HG2_PB_assemblyticsfalcon_27804:HG3_PB_HySA_15651:HG2_PB_HySA_18762:HG4_PB_pbsv_10366:HG4_PB_assemblyticsfalcon_27229:HG3_PB_SVrefine2PBcRDovetail_4789:HG3_PB_pbsv_10083:HG3_Ill_GATKHCSBGrefine_6953:HG2_PB_SVrefine2Falcon2Bionano_4892:HG2_Ill_GATKHC_16775:HG3_PB_assemblyticsfalcon_27722:HG3_PB_HySA_15650:HG2_PB_PB10Xdip_31699:HG2_PB_PB10Xdip_31700:HG4_PB_HySA_15183:HG4_PB_SVrefine2PBcRDovetail_5187:HG4_Ill_manta_2521:HG4_Ill_250bpfermikitraw_13881:HG4_Ill_MetaSV_5612:HG4_Ill_GATKHC_16794:HG4_Ill_GATKHCSBGrefine_7182:HG2_Ill_GATKHC_16774:HG2_Ill_GATKHCSBGrefine_7051:HG2_PB_SVrefine2PB10Xhap12_7560:HG4_PB_SVrefine2Falcon1Dovetail_6343:HG2_PB_SVrefine2PBcRplusDovetail_11606:HG2_PB_SVrefine2Falcon1plusDovetail_12406:HG3_PB_SVrefine2Falcon1Dovetail_6247:HG3_Ill_SVrefine2DISCOVARDovetail_7715:HG2_Ill_breakscan11_4072;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7051:HG2_Ill_GATKHC_16774:HG4_Ill_GATKHCSBGrefine_7182:HG4_Ill_GATKHC_16794:HG4_Ill_MetaSV_5612;NumExactMatchSVs=5;ClusterMaxShiftDist=0.172249;ClusterMaxSizeDiff=0.162679;ClusterMaxEditDist=0.292453;PBcalls=20;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=104;DistBack=-1;DistForward=8;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=131;REFWIDENED=9:83608735-83608865;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5665.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:2:45:3:25:./.:0:0:0:0:./.:1:4:./.:.:.:.:.:.
chr9	84408386	HG2_Ill_250bpfermikitraw_14000	A	AAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG3_PB_pbsv_10088:HG2_PB_PB10Xdip_31705:HG2_PB_PB10Xdip_31706:HG2_Ill_GATKHC_16783:HG2_Ill_GATKHCSBGrefine_7057:HG3_Ill_Spiral_10955:HG3_Ill_GATKHC_16717:HG3_Ill_GATKHCSBGrefine_6959:HG2_PB_HySA_18775:HG2_PB_assemblyticsPBcR_27063:HG3_PB_assemblyticsfalcon_27729:HG3_Ill_Krunchall_14035:HG3_Ill_250bpfermikitraw_13613:HG3_Ill_150bpfermikitraw_13187:HG2_Ill_250bpfermikitraw_14000:HG3_Ill_svaba_13142:HG3_Ill_scalpel_10030:HG3_Ill_FB_9047:HG2_Ill_svaba_12983:HG3_PB_HySA_15657:HG2_PB_pbsv_10340;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14000:HG3_Ill_150bpfermikitraw_13187:HG3_Ill_250bpfermikitraw_13613:HG3_Ill_Krunchall_14035;NumExactMatchSVs=4;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.245283;PBcalls=8;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=12;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=80856;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=9:84408382-84408413;PctSeqSimilarity=0.9816;PctSizeSimilarity=0.9516;PctRecOverlap=0.6508;SizeDiff=-3;StartDistance=-20;EndDistance=-20;GTMatch=0;TruScore=86;MatchId=5666.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:29:./.:7:14:6:8:./.:0:0:0:0:0/1:20:16:./.:.:.:.:.:.
chr9	85773568	HG2_PB_SVrefine2Falcon2Bionano_4901	T	TATATACATATATGTATATATTTATGTACATATACATATGTATATATTTATGTACATATACATATATGTATATATTTATGTACATATACATATATGTATATATTTATGTACATATACATATATGTATATATTTATGTACATATACATATATGTATATATTTATGTAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4797:HG4_PB_SVrefine2Falcon1Dovetail_6351:HG3_PB_assemblyticsfalcon_27739:HG2_PB_assemblyticsPBcR_27075:HG3_PB_SVrefine2Falcon1Dovetail_6256:HG4_PB_pbsv_10376:HG2_PB_SVrefine2PBcRplusDovetail_11615:HG2_PB_pbsv_10346:HG2_PB_SVrefine2PB10Xhap12_7570:HG2_PB_SVrefine2Falcon2Bionano_4901:HG2_PB_SVrefine2Falcon1plusDovetail_12417:HG2_PB_PB10Xdip_31718;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12417:HG2_PB_SVrefine2Falcon2Bionano_4901:HG2_PB_SVrefine2PB10Xhap12_7570:HG2_PB_SVrefine2PBcRplusDovetail_11615:HG3_PB_SVrefine2Falcon1Dovetail_6256:HG4_PB_SVrefine2Falcon1Dovetail_6351;NumExactMatchSVs=6;ClusterMaxShiftDist=0.145658;ClusterMaxSizeDiff=0.140056;ClusterMaxEditDist=0.306069;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=166;DistBack=-1;DistForward=7;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=253;REFWIDENED=9:85773474-85773726;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5668.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:100:1/1:1:16:1:16:./.:0:0:0:0:1/1:1:68:./.:.:.:.:.:.
chr9	85835162	HG3_PB_HySA_15667	G	GAGAGAGGACTCGCTTCTGCGCTAATGGGGATCGCCATAGCTTCAATGACTATAAAATCAGACCTGTCGTATCTGCATAGCCTGTCTTAGAGGTTTACGGGACTCGCTTCTGCCGCTAATGGGGGATCGCCATAGCTTCAATGACTATAAAATCAGGACCTGTCGTATCTGCATAGCCTGTCTTAGAGTTTTACGGGGACTCGCTTCTGCGCTAATGGGATCGCCATAGCTTCAATGACTATAAAATCAGGACTTGTCGTATCTGCATAGGCCTGTCTTAGAGGTTT	10	PASS	ClusterIDs=HG3_PB_HySA_15667:HG2_PB_pbsv_10347:HG2_PB_HySA_18788:HG3_PB_pbsv_10093:HG2_PB_SVrefine2Falcon1plusDovetail_12418;NumClusterSVs=5;ExactMatchIDs=HG3_PB_HySA_15667;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0819113;ClusterMaxSizeDiff=0.0750853;ClusterMaxEditDist=0.247492;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=286;DistBack=51111;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=101;REFWIDENED=9:85835163-85835263;PctSeqSimilarity=0.9792;PctSizeSimilarity=0.986;PctRecOverlap=0.9826;SizeDiff=4;StartDistance=-3;EndDistance=-3;GTMatch=0;TruScore=98;MatchId=5669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:./.:9:9:6:10:./.:0:0:0:0:0/1:33:7:./.:.:.:.:.:.
chr9	86094586	HG2_PB_SVrefine2Falcon2Bionano_4902	G	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGAAAGGAAGGAAGGAAGGAAGGAAAGAAA	10	PASS	ClusterIDs=HG2_PB_pbsv_10349:HG4_PB_HySA_15196:HG2_PB_SVrefine2PBcRplusDovetail_11616:HG3_PB_assemblyticsfalcon_27743:HG2_PB_assemblyticsPBcR_27077:HG3_PB_SVrefine2Falcon1Dovetail_6257:HG2_PB_HySA_18791:HG2_PB_SVrefine2Falcon2Bionano_4902:HG2_PB_SVrefine2PB10Xhap12_7571:HG2_PB_HySA_18790:HG2_PB_PB10Xdip_31721:HG2_PB_PB10Xdip_31720:HG3_PB_pbsv_10095:HG4_PB_pbsv_10378;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4902;NumExactMatchSVs=1;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.157895;ClusterMaxEditDist=0.362069;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=115;DistBack=7;DistForward=119562;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=86;REFWIDENED=9:86094542-86094627;PctSeqSimilarity=0.9422;PctSizeSimilarity=0.9426;PctRecOverlap=0.6016;SizeDiff=-7;StartDistance=45;EndDistance=45;GTMatch=0;TruScore=82;MatchId=5670.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:29:./.:2:28:0:2:./.:0:0:0:0:./.:1:2:./.:.:.:.:.:.
chr9	89226661	HG2_PB_pbsv_10362	T	TTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGCGCCCAGGCTTGGCAGTGCAGTGCGGCGATCTCGGGCTCACTTGCAAGACATGCCTCCCGGGTTCACGCCATTCTCCTGCCCTCAGCCTCCAAGTTAGCTGGGACCACAGGCGCCCGCCACTACGCCGCTAATTTTTTGTATTTAGTGCTCTAGCAGACGGGTTTCACCGTTTAGCCGGGATGGTCTCGATCGTCCTGCACCTCGTGATCGCCGCCTCGGCCTCCCAAAAGTGTGTGCGCCG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6358:HG2_PB_pbsv_10362:HG2_PB_PB10Xdip_31742:HG4_PB_pbsv_10390:HG2_PB_HySA_18824:HG2_PB_assemblyticsPBcR_27104:HG2_PB_SVrefine2Falcon2Bionano_4907:HG2_PB_SVrefine2Falcon1plusDovetail_12423:HG3_PB_SVrefine2Falcon1Dovetail_6266:HG2_PB_SVrefine2PBcRplusDovetail_11621:HG2_PB_SVrefine2PB10Xhap12_7582;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_10362;NumExactMatchSVs=1;ClusterMaxShiftDist=0.160748;ClusterMaxSizeDiff=0.160748;ClusterMaxEditDist=0.23221;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=282;DistBack=8;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=9:89226652-89226666;PctSeqSimilarity=0.9432;PctSizeSimilarity=0.9823;PctRecOverlap=0.9541;SizeDiff=5;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=95;MatchId=5673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:38:0|1:28:0:3:33:./.:0:0:0:0:0/1:17:7:./.:.:.:.:.:.
chr9	89613930	HG2_10X_SVrefine210Xhap12_7390	C	CAATGGAAAAAATAAAACCCATTTATCTAGCTTATATATTTTTAAGGTTTTACTATGGAATACAGCATGCATAAATAGTGAATGCACGTGAATGTGTGTAATGTGTGTATATACTCTTTAAATAATAATTATTGAACATCCATAAATTCATTACTAATATGTTGGATCGGGGGTTGGCAGATTTATGGGCCTCAGGCCACATCCAGCCCACGGCCTGTTTTTGTAAATAAAACTTTACTGGGACTCAGCCATGGCCATTTATTTACATATTATCTGTCTTGCTTTCTTGTTACAAGAGTAAAATTGAGTAGTTGCAACAGAGACATATGGCCCACAAAGCCAAAAATAGATACTGTCTGGCCCTTTATAGAAAGCATTTGCAGACTTCTGCCGTAGATATCTCTTCTTGATCCCATTCCCTCTTCCATCGCCAGGGGCAGCCACTCCCCTATACTCTGTACCAATCTTTCCTTTTAAGAAAATTAATTGTTTAGTTTCACATATTTGACTCTAATATAAATAAAATTATGGGCAATTCGTTCTTTATGTTTTTGAGATTCATCAATTTGATGTATAAGGCTGAAGTTCGTTGGCTTTTATTGCTGATTGATAGTCTATTACCTGAGACTATCTCTGTTCATTCAGTCTATTGTTTGATGGTTATTTTTGCTGTTTCCAGTTTTCTGCTATTTTGAATAGAGCTATAGAAACATTCTTAGTATGACCTCCGGTGAACATGTACACGATATTCCCTGGTATGCTTCCTGGAATTGCTGAGTGAAAGAGGATGTGCATATTTACATACCCAATGTCAATGCCCTATCTGAACTATTTTCCAAGTGGTTGAACCAAGTTATATTCTCACCTGCATTATATGAGAGTTTCTCTAACTCTATAACTTCACCAACACTTACTAACTTTCTAAATGTTTGCCAATCTGGGATGTGAGAAATGGTATCTCATTAGATTTTAGTTTGTTTCCCTTAGGAATATAATCTGCCGCTTTCTGTTTATGAACCACTCATGTTTCTTTTTCTGTGAAATAGCTGTTTATGTCTTTTCCCATTTCTCTGTTTTTGCCTAATATTAATTTATGTAAACTTGTTTTACATTCTGGATATAAGATTGTTGTCAATAATTTGTGTGATATATGTCCTTTTCCAGCTTGGACTTCTCTTGTCATTTTCTTGTGGTCATGTTTTGATTGACAGACTTTTAAAAATATATGTAATCTATAAACTAAAGAGCTTCTGCACAGCCAAAGAAACTATCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAATTTTTTGCAATCTATCCACCTGACAAAGGGCTAATATCCAGAATCTACAAAGAACTTAAACAAATTTACAAGAAAAAAAAACAAGCAACCCCATTAAAAATTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGAAATTTATGCAGCCCACAGACATGTGAAGAAAAAGCTCATCATCACTGGTCATTAGAGAAATTCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGTAATCATTAAAAAGTCAGGAAACAACAGATGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACATTGTTGGTGGGAGTGTAAATTAGTTCAATCATTATGGAAGACAGTGTGGCGATTCCTCAAGTATCTAGAACTAGAAATACCATTTGACCCAACAATCCCATTACTGGGTAGATACCCAAAGGATTATATATCATTCTACTATGAAGACACATGCACACGTATGTTTATTGTGGCACTGTTCACAATAGCAAAGACTTAGAACCAAACCAAATGTCCATCAATGATAGACTGGATAAAGAAAATGTGGCACATATACACCATGGAATATTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGCAGGGATATGGATGAAGCTGGAAAACATCATTCTCAGCAAACTAACATAAGAACAGAAAACTAAACACCGCATGTTCTCACTCATAAGTGGGAGTTGAACAAAGAGAGCAGAACATCACACACTGGGGTCTGTCAGGGGATGGTGGGTTAGGGGAGGGATGGCATTAGAAGAAATACCTAATGTAAATCACGGGTTGATGGGTGCAGCAAACCACCATGGCACGTGTATACCTATGTAACAAACCTGCATGTTCTGCATATGTACCCCAGAACTTAAAGTATAAAATATATATATGTAATCTAATATATCAATTTCTTTCTGTATGTCTATAAAGTTTGCATTTTAAGTAATCATTTTCTATCCCAAAGTTATGATGATATTCTCCTTATATTTTCTTCTAAAATTATCAAAGTTTTGCCTTTCAAAATTAGGTTGTAATATACCTGGAATTGAGTTTTGTGCATATTCTGAAGGACAGTCGACTTAACTTTTCTCCATAAAAATTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4075:HG3_PB_pbsv_10107:HG2_PB_pbsv_10363:HG3_PB_SVrefine2Falcon1Dovetail_6267:HG2_PB_SVrefine2Falcon1plusDovetail_12424:HG4_PB_SVrefine2PBcRDovetail_5201:HG4_Ill_SVrefine2DISCOVARDovetail_7511:HG3_PB_SVrefine2PBcRDovetail_4806:HG3_Ill_SVrefine2DISCOVARDovetail_7738:HG2_Ill_SVrefine2DISCOVARplusDovetail_13630:HG2_10X_SVrefine210Xhap12_7390:HG2_PB_SVrefine2PBcRplusDovetail_11622:HG2_PB_SVrefine2PB10Xhap12_7583:HG2_PB_SVrefine2Falcon2Bionano_4908:HG4_PB_SVrefine2Falcon1Dovetail_6359:HG4_PB_pbsv_10391:HG3_PB_HySA_15688:HG2_PB_PB10Xdip_31744:HG2_PB_PB10Xdip_31743;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7390:HG2_Ill_SVrefine2DISCOVARplusDovetail_13630:HG3_Ill_SVrefine2DISCOVARDovetail_7738:HG3_PB_SVrefine2PBcRDovetail_4806;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0455553;ClusterMaxSizeDiff=0.0399113;ClusterMaxEditDist=0.190191;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=2433;DistBack=146135;DistForward=32558;DistMin=32558;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=9:89613931-89613932;PctSeqSimilarity=0.9998;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5674.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:83:1/1:0:7:0:15:./.:0:0:0:0:1/1:0:42:1/1:11:430:.:2227:.
chr9	90381206	HG4_PB_SVrefine2PBcRDovetail_5207	G	GAAATAATTATAATATATAATATATAATAATATTATAATATATAATTATATATTATAATATATAATATATAATTATAATATATAATATATAATAATGTTATAATATATAATATATAATAATATTATAATATATAATATATAATAATATTATAATATATAACATATAATATATAATATAATATATAATATATCATATATATTTTATATATATATAATATATTATATATA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13637:HG4_PB_HySA_15237:HG2_PB_HySA_18845:HG2_PB_PB10Xdip_31751:HG2_PB_PB10Xdip_31750:HG4_Ill_MetaSV_5628:HG4_Ill_GATKHCSBGrefine_7223:HG3_Ill_MetaSV_5575:HG3_Ill_GATKHCSBGrefine_6994:HG2_Ill_SVrefine2DISCOVARplusDovetail_13638:HG2_Ill_MetaSV_5391:HG2_Ill_GATKHCSBGrefine_7092:HG4_PB_pbsv_10400:HG2_PB_pbsv_10373:HG3_PB_pbsv_10115:HG4_PB_SVrefine2Falcon1Dovetail_6363:HG2_PB_SVrefine2Falcon1plusDovetail_12431:HG3_PB_SVrefine2Falcon1Dovetail_6271:HG4_PB_SVrefine2PBcRDovetail_5207:HG4_Ill_SVrefine2DISCOVARDovetail_7516:HG3_PB_SVrefine2PBcRDovetail_4813:HG3_Ill_SVrefine2DISCOVARDovetail_7743:HG2_PB_SVrefine2PBcRplusDovetail_11630:HG2_PB_SVrefine2PB10Xhap12_7592:HG2_PB_SVrefine2Falcon2Bionano_4913;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13637:HG4_PB_SVrefine2PBcRDovetail_5207:HG4_Ill_SVrefine2DISCOVARDovetail_7516:HG3_PB_SVrefine2PBcRDovetail_4813:HG3_Ill_SVrefine2DISCOVARDovetail_7743:HG2_PB_SVrefine2PBcRplusDovetail_11630:HG2_PB_SVrefine2PB10Xhap12_7592:HG2_PB_SVrefine2Falcon2Bionano_4913;NumExactMatchSVs=8;ClusterMaxShiftDist=0.203704;ClusterMaxSizeDiff=0.203704;ClusterMaxEditDist=0.249412;PBcalls=15;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=227;DistBack=6212;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=138;REFWIDENED=9:90381207-90381344;PctSeqSimilarity=0.964;PctSizeSimilarity=0.9956;PctRecOverlap=0.4148;SizeDiff=-1;StartDistance=-133;EndDistance=-133;GTMatch=0;TruScore=79;MatchId=5677.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:./.:0:2:0:2:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr9	90482816	HG4_Ill_GATKHCSBGrefine_7224	C	CCAGGAGTTCAAGACCAGCCTCGCCAACATGGTGAAACCCCGTCTCTACTTAAAATACAAGAATTAGCCAGGTGTAGTGGCATGCACCTGTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCGGGGAGGTGGAGGCTGCAGTGAGCTGAGGTTGCGCCACTGCACTCCAGCCTGGGGGACAAGAGTGAGGCTTCGTCTGAAAAAAAAAAAGAAAGAAAGAAAGAAAAAATTCTTTTGTCAAAAACTTGTCTAAAACCCACAGGGCTTAGAAAACAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12432:HG4_PB_SVrefine2Falcon1Dovetail_6365:HG4_PB_HySA_15238:HG2_PB_HySA_18846:HG4_PB_pbsv_10402:HG2_PB_pbsv_10375:HG4_PB_assemblyticsfalcon_27282:HG4_Ill_MetaSV_5629:HG4_Ill_GATKHCSBGrefine_7224:HG2_Ill_SVrefine2DISCOVARplusDovetail_13639:HG2_Ill_MetaSV_5393:HG2_Ill_GATKHCSBGrefine_7093;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7093:HG2_Ill_MetaSV_5393:HG2_Ill_SVrefine2DISCOVARplusDovetail_13639:HG4_Ill_GATKHCSBGrefine_7224:HG4_Ill_MetaSV_5629;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0705882;ClusterMaxSizeDiff=0.0705882;ClusterMaxEditDist=0.134868;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=289;DistBack=-9;DistForward=-1;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=9:90482817-90482816;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5678.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:./.:18:6:2:16:./.:0:0:0:0:0/1:19:18:./.:.:.:.:.:.
chr9	90814782	HG2_Ill_SVrefine2DISCOVARplusDovetail_13641	G	GGGCCAAGGTGGGTGGATAACTTGAGGTCAGGAGTTCAAGACAGACCAGGCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAACATTAGCTGGGCATGATGGCATGTGCCTGTAATCCCAGCTACTTGGGAGATTGAGGCTGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGGAGTGAGCCAAGATCACGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAATTACATCTCAGAGAAAAAAAAAAAATCAGATCTCTTGATAATTTAAAATCTCTGAATATAGACTAAATAGAGGACATATCAAGGAGCAAAATAATTAGCAAATTAAAAAAGAAAACTGAGAAAATCTCCTAGTACAGAGCAGAGATGAAGAGATGGAAATTAGAAAAAAAAAAGTGAAGAGACATGATATAAATTTAAAGAAATGTCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAATTTTAGTATTTTAGCTGGGCTAAAATTTAGCTGGGCATGGTGGCGCGTGCCTGTAGTCCTAGCGACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCCGGGAAGCGGAGGTTGTAGTGAGCTGAGATCACGCCACTGTGCTCCAGCCTGGTGACAGAGCAGGAGCCTCAAAAGAAAAAAAAAAAGAAACGTTTGAAAGAGTGAAAAAAATGAATGTTAAAAATGGAATAATTAGGCCAGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCATGAGATCAGGAGATTGAGACCATCCTGGTGGCACGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTAAACCCGGGAGGCAGAGGTTGCAGTGAGCCCAGATCGTGCCACTGCACTCTAGCCTGGGTGACAGAACAAGACTCCATCTCAAAAAAAAAAAAAAAAAGTAATAATTAAAGAGATGAAAGCTGAGATTTTCCTAAACTGAAAGATAGGAGTTTTTTCATTGAAAAATTCTACCTAATGTTGGCTGGGCGTGGTGGCTCACGCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAAGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGATGAAACCCCGTCTCTACTAAAAAATACCAAAAATTAGCCAGATGTGGTGGCGGCTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTTGCAGTGAGGCCAAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGGGAGACTCCGTCTCAAAAAAAAAAAGAAAAGAAAAATTCTACCTAATGTTAAATAAATAATAATTATGGAATTATTATAGTAAATTCCTAACTAGCCCCATCATAGTAAAACTGCAGAACTTTAAAGAAAAATCTGGAAAGCTATCACAGGAAAAAAAAAGTGGTACATAAATAAAGGAATTAACTATGAATGATAAACAGATTTCTCACCAGACACAATAGATGTCAGAGCACATAGCAGTAATAAGTTCACAATACTGAGATAGAATAACTGACTCAAGAATTCTGGCTGGGCATGGTGGCTCACACCTGTAATCCTAGCTAGCACTTTTGGAGCCTGAAGTGAGAGGATTGCTTGAGTCCAGGAGCTCAAGCCAGGCTGGGCAACATGGTGAGACCTCATCTTTACAAAAAAAATAAAATAGAATTAGGCATGGTGGTGTGAGCCTCTCATCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATTGTGCCACTGCACTCCAGCCCAGGCAACAGAGAGAGACCATGTCTCTCTAAAAAAAAAAAAAATTCTATTACCAGCCAAATTATTATTCAGGAGGGGTATACAAAATGATTACCATATGTATTTCCTCTGCCACCAAAATCCCACTAAATAACTGTAAATAATTATAGAGCTATAAATCCACAATGGGTCATATGTTTTTGTAAGTTTTGCAAAAATAAAGATATTTGAACTGCAACTTGTAAAGAATATTGTTTCCACTCTGACTCCCCATCTTATCTGATGCCTCTGGTAATCCTTTTTTGTATTTTACACTTAAATATGTAGGCAGAACCAAGGAGAACTAGAGAAAAGGCTTCATCATGAAATACAGAGACCAAAACAAACATCATAAAAGATAACTTAGAGACAATGCAAGAAGCAGAAGATTTTGTGGAAAAAAAAATCTGTGATTAAACATTTTTCAATACAGAAAATATCATATCCCTGAAAAAAGGAACATGTTCTATTTCTAAAAGAACCAGCAGAAAAAATATATATAGTAGAAGAAATTTTTAAAAATCAGTAGAAATAGTTGAAGATAAAGTAAATCAAGACATATCCCAAAAACAAGATTTTAAAAATTTTTTTAAAAATTAAAGATCAATCTTGGTGGTCCAATATACGAGTAACAGGAATTGTAGAAAAAACAAAGTATAAAAAAGAAATTCAAGAGAAAGTCCTGTAACTTAAGGATACATATTGGATTGAAAGACCCCCACCGAAGCTCTAGCACAATGAATAAAACATTCCCCTACCAAAGGGTATCCTTGTGACATTTCCAAGTCATACACAAATCACCTAAAATCAAAATGGTATCACATTCTCAACAAGAATATTGCACACTAAAAAACAAGAGGAAATAAATTCGAATTTCTGAGGGAAAATTATTGTTAACTCAGAATTCTATATCTAGCCGAATTATCAATTACACATAAGGCTAGAATAAAGACATTTTTAGGTATAAAGGGCCAAGAGTAATTTCGTTTCTTCCTCAAGAAGCTAATAGAGGACATACCAAAACAAAGAACTAAACTAAGAAAGAGGAGAAAGACACTTAAGTGGCCAGAAACAGGGGTTTCAACACAGAACAGTGAAGAAAATCTCAAGTGACAGATACGGCAAGAAAATAAAGGAATTCAAGTTGTAAAACAAACCAAAAATTGAAATGTTTACATGTTTAACTATAGTTAAATTGTTAACTATAGGTATCATAATAAAATGTTCACCTATGGGAAAACAGTATTAAGAGGTCTCAATATATGGGATTATTTGAGAAAAAATATATCTATACATTCATAAAAAATTCTGTAAATAATAGAAACACAAATACTAGCTCTGGGCCCAACAATTTAACAAATAATGGTTAATAATCACAGTCATGACTGGGAGTGGTGGCTCACACCTGTAATCCAAACACTTTGGGAGGCCAAGGTGGGTGGATCATTTGAGGTCAGGAGCTCGAGACCAGCTTAGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGTATGCTGGTGCATGCCTGTAGTGCGAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGATGGAGGTTGCAGTGAGCCAAGATTGCACCACTGCACTCTAGCCTGAGCTACAGAGCAAGACTCTGTCTCAAAATAATAATAATAATAATTATCACAGTCATAATTTGTATCTGCATTGAATGACAGCTACACAAACATAAAGAAATGTAAATAGGGGCCAGGCACAGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATGCTGGCTAACATGGTGAAACCCAGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGCTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAATCCGGGAGGTGGAGCTTGCAGTAAGCCGAGACGGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAACTGTAAATAGGAAGTATCAATTTAACCAAACATGTGGTATGACCATATTAGGCAAGGACATCTTTGATACAACTATATTACACAAAAGAGTATATATAATATAATTTCATTTATAAAAGTCTAGAAAATACAAACTAATCTACAGTGACAGAAAGCAGATCATTCGTTGCCTGAGGGAGGTGATATCGTGGTGGAGTGAAGGATTCCAAATGGGCACAGGTGATCTTTAGAGCATGATAAATATGCTCATTTTTCTTTATGTTCATGATGGCTTCACAGGTGTATATGCATGCCAAAACTTTTCAAACTGTACACTTTAAATATGCTCACTTTATTGTATGTCAATTTTATCTCAATAAAATTATAAACAAAATTTTTTAGATAGGGTCTCACTCTGTTGGCCAGGCTAGAGTGCAATGGTGTGATCATAGCTCACTGCAGCCTCAAACTGCTGGGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCTAGGATCATGAGTGCTTGTCACCACACCCAGCTAACTTAAATGAAACATTTTTTAACACAATAAAAAAACATATTGTTAAAATGACTAACTTAAAAAAAAATCTAACAATACCAAATGCCAGTGAGGACACAGAACAACTAGAATTCTCATGCACTGCTGGTTAGACTGCAAAATAATATAGCCACTCTGAAAAACCACTTGGCCGTTTTTATAAAGTTAAACCTGGAGTTCTCACACGACCCATCAATCCTAGTCCTTGGTCATTACCCAAAAGAAATGAAAATGTCTGATCACACAAAAACTTTACATAAATGTTCATAGGAGCTTTAGTTATAACCATCAAGACCTGGAAACAACCCAATTATCCTTCAACAGGTGAATAAACTATGATATATCCATAAGATGAAATACTACTCAGAAATAAATGAGAACAAAGTATTCATACACATAAAAACACAGATGAATTCCTAATCTTGCAGAGAGAAAGAAGCAGACCTCAAGAGGTTACATACTGTATGATTTGTGTGTGTGGGTGATGTTCTAAAAAAGGCAAAACCGCAAGGAATGGGGAAGAGATCAGTGCTTGCCAGGGGTCAGGCGTTTGATTTTAAAGGGGTAACATTCAAGAGTTTACTTTTTATACGATGGAGCTCTCTTGCATCCTAATTGTGGTGGTGGTTATAAAAATCTATACAGGTGTTAAAACTTACAGAACTATAGACCCCAAAAAAGGTCAATAGATAAATTTTAAAATTAATTTTTAAAAATCGATGCATCTTGAGTATGTGTAGCAATAAAAGGACAATACTGGATGATGCAACTTAACATGAGTAATTGATGGTCTCTTCCCTAATGACCTGGAAGTCACAGACCGACCTGATGGCCAATCAACATTCAGCGTGTAGGCCTTGACTAGAGAGTGAGGGAGAGTTTTCTGAACACTGTATTTCCTTAAAAATTTACCAGTAAGTACATGCTACAGATAGAACTGTTTCTTACGTCTTCTAAAGCTCTCAGGTAGTAAAAGTGGCAATGTGAGGTGAAATTTTTTATTAAAAGTTACTATTAAATAATAACAACGAATGATATTTCAAGCAACTTCCTTAAAGTGATTTTATCACAGGTTTCAATGGACTAAAATGGCAATAAATTTAAGCATATTAAAGCTACGTAAACATCTTTAAACCTGAAAGCTGAGGATCTGAAGAATTTGAAAGGCATAATTTCGTGCTTTAAATTTCATATAAGGAAAGAACGAATTTGCACATTCTAGGATAAGCTGTAACAGTGCATATTAGCGCAGTTCATGGCATTATGGCTACAGCTTAAATGTGGAAAGAGTTAAGAAAATCTTGTTAAACTGACACAGACTTTTACAACACGATGTGTTTTGTCTGTTTTTTGCCAGCAAAGGCCAACTCAAGGACACTCCTCACCCAGCACTCACGACCCAGACAAGGGTAGAGCCAAGGGCCTCTGCAAGTAGGTGTCAGCGCTAGCTTTTCTTCTTGTCTTCACAGCCTGGGATGGGGCCGGTGAGGAGTCAAAGCACCCAGCGCTGTAACTGAATATTTAATCACCCGCTCCTTCCTGGTTGATGATTAGCATTTATTACGCAAAAACACTGAAACTGCTGTGCCTGTCCGGTTTAGAAAATGAAATCTATTCCTTTTCCAGAGACAGTTTGCTCCGGCCACTATGAGACGTCCAACACGGCACAACTCCTGACTCAACTCCAGGGAGTCCCCCCACTTTTCTGACAAAATAGCTCGGGATGAAGAAGGGACGTTTAAAGTCGGGATGATAAGCATTTTACCTGCTTGAGAAGCACAAAGCCTGCGACTAAAGACAGTCACAGAGTCTGGAAGGAGAAAGGTACTTTAGAAGAAATCATCTAGGCCAGGCGCGGTGGCTCACGCCTGTATTCCCAGCACTTTGGGAGGCCGAGGAGGGTGGATCACCTGAGATCAGGAGTTCAAGACCAGCCTGGTCAACATGGCAAACCCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCGGGCAGCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCGGTGAGCTGAGGTCATTCCATTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCATAAACAAGAAGAAGGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGGAGAAGGAGAAGGGGAAGGAGAAAGAGAGGAGGAAGAGGAAGGAGGAAGAGGAGGAGGAGGAGGAGGGAAGAAGAAGAAGAAGAAGAGAAGAAGGAGAAGGAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATAATCATCTAAAGTAAACCAATGGACTCATTCAACTAATAGTACCACCAGGGCGGGGCAGGGGTTAAGGTGGGCATATAAACTGGGGCATAGTTGACAGCTCGGTTGATGGCAGCTCTACCTTTGCAAACCTATTTAGCAAGGAAATGGAAGTCAGTTTCCTTGTTTTTCAGGTAAGAAGCTAAGGGAGAAAGTTCAGGGAGGTGAAACAATTTACCACGTTCAAGGAGCTGGCAGGTGGCAGAGCTGAACCCAGCAGTGGCACTCCTGATTCTGAGTCGGTCATGCCGCCCTTGAGGGCAGAAGGCAGCAGCCCTAGGAGTCAGGTGCCTGGGCAGGCGTCTCAGGTGACAGGCTCCAGGCCAGCTGCACGGGGCTGGTCCAGGGGTTGCCTCCACCGTGTGAGACCTTTCCAGGCTCCTCCTGCCTCACACTGGGTCCTTCCCAGAGCTGAAATCAAAGTGGGTCCAATCCCATTTACACACGAGCTGCAGGTGCTTACCCCTGTGCAGGGATATCAAATCTGTGAAGGGAAGGAGACAAATGCCCTCAACTGGGAATGGCAGGCCATGAAGGGGCGGGCACTGAGGTGAGCTAGGGGCTTCTCTACCCCACACACAAACTGAGTAACCCAAACATTCTACCAGCTGCAAAGCTGATACTCTGACAGCAGCCAGCGGCAAGACGTTGAACCACTTTGTCAAGTAGCTCTTAGGGAGGACCAAACTGAGAGGAAAAATCCGTTTTTCTCAAAGTCATTTGCTTCCAGGGCACAGTGTTTTTGCAGTCCATCTCCTCTCTCCCCAGCACCTTGGCCTGGTGTTAAAGTTCAGTCCATATCCATCAAATTGAAGGCAGCAGCTTCCTGGGGCCTCCCGCCTTAGACTCAGGTGTTTAGACAAAAAGTATTTCAGGTAGTTAGTACTAAGTGGAACTCAAAGCGGAGAGCAAATAGACACCCCCAGGGTTTACTGACCCTCCTCAAGCTCTCAGGTTGGTGGAGATTTCAAAGGTCCTTCGGGTGCCATAGCATGGCCTGCCTCCTCGACTGCACGGTGACACCCTCATATCCTGTTCATGAAGATATTGCACAGGAAAGATGCATCTAGAGACATGTTCCTGGCAGAGGCTGCCAAGCCCACATCTCCAGGTTTGCAGTTCACACAATCATAGGGTGTCTCTTCAGCAAAGTGTTTGCTATTTCTAACAACGGTCTCTGGGAAAGGTTATCAGATTTCATTCAACTGACCCATTAAAACTTCAAGTTCGATACCTTTCTTGCCTTTCCTTTATTTGTACTCAGTTGAAACAAGGTGGAGCCCTGGAGCCCACTGTGCTGAATGGGCTTCCTGCTTCAGTAAGGGAGAGGATGTCCACACAGTAATGCCTGGAGCCCCTCAGGCACACCAAGTGGTACTCCCACCCCTTACTGCCCCTACTTCCTTTACAAGCACAGAAACTGATGCCAGCCAAGTTAGGAATAAAGGAAGAATTAGGAGCATGCCAGACACTCCCCGGAAGGCTGAAGAATGGAGATCAGAAACCATGGGAACCAGGGCAGCAAGAACAGCTCGGCCACCTCTTCACACTTCATTTTGAAATGAATGAACCCCCAACTCACTCCTCATATTTGCATTAGTCCACTGGAGGCAAAATCCCAGCGGAGGGCCTGGTTGGCCCTCTTTACAGCAAATGCCCACCATTTGAATGTGGCTAAGGCTGTGGAAAAAAGGCTCTGCTAGGAAGGGCCCACTGGTTTCTGAACAGGGAGCAAAGGGAACTTTGATTTACATCCCCACCAAGCCTTTACCCAGTGAAGAATAGGAATTCCCAAAATGGAACTCAGGATGCTTACAGAGAAGGAGATATGGTAAGGGAGCAGGCAAAACAAGATGCTGTCCACAAAACCGCTCTATCAGGGCAGTGGATGGAGCTGTGGACTCCTCAGAGGATGTCTACACCATGGTCAACCCTGGGCCCTTTAAGCTGGCAATGGCGGCGACCTTGTCTTGTACTCAGCAGGACTCTCTCGCCTCCTCTTCCTCAAGCCCATTCCCTCTGTTTGCTGTGGGAAAGGTGAATGGGCGCTCAGATTCATCCAGGTTTCAGAGCTGGAGAGGGCTGGAGAGATTTCTAGCCGGAGCCCTGTCAGGGAGGAAATTGTGGATTGAAGAGGACGTGGACACCATGAGAAGGGTCAATGAGGAATGAAATGCTTTGCCTCAGCATTGGAAGATCACTCAGGGACAGGCACCGTGGCTCATGACTATCATCCCAGCACTTTGGGAGCCCGAAGCCGGGGGATCATTTGAGGCCAGGAGTTCAAGACCATCCTGGACAACATAGTGAGACCCTGTCTCTACAAAAAATTAAAAAATTATCTGGGCATGGTAGTGTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGGAGGCAGGATGACCACTTGAGCCCAGGAGTTCGAGGCTGCTGTGAGCTGTGATCACACCGTGGCACTCCAGCCTGGGTGAAACAGTGAGACTCTGTCTCTGGAAGAAAAAAAAAAATCACTCAGACTGTAGCCTACAGACCAGACCACGGGGCCCAACGTGAGAAAAGCAGGGAGCCCAGTGAGGAAGCTCCTGGTATCAGAGAGAGATGAGGCGGCCAGGTTGAGGGTGGGAGCTGGACATTGGGCAGGCACTCAGTGTCTCATATATCCTGAAGGAGAGGCCATGGGGCTTAGGACAGGCTGGATGTGGTGTGCTGGTCACAGAGGAGTCAGGGACTGCCCCAGAGGGAAGCTATGTTAAAAGAACAGCCCCTCTGAGAACCTGGGCACCACGTTGCCTTGAGAGTTGTTTACACAATCTGGTGTCTCTTCAGCAGTTTTCGACAGAAATTTTTTGAACAGAAAATTTTATCCCATAGGACTAACAACTTGGACAATCAATTCATTTACTTATTCTTTCTCATATTTACATCTGATGTTCCTTTCTTTTGCAGATTTTGTTAAGACTTGAATTAAATATGTAGTCAAGTTAAACTGTGCTCACTTAGAATGCAGCCAGTAATTTTTTAAGTTTAGCAAACAAACAAATGTTAGAAGGGAAAGACCAAATCTGAGGAAGAATGAGAGAAAGATCGGGGGAGGAATTTTGTTAAAGGAAGAGGGAACTTACAAGTATTGTGATTCGAAAATATTAGCAATAATTGGAGTAAAGAACTCAGTAGTTTACCTTAACGTTCACTCTTGGGTTTGTACATTCTGTGAGTTTGGACGAGTATAAAATGGCATGTAGCCACCATTACTGTATCATACAGAGTAGTTCTGCTGTCCTAAAAATCTATTTATCTCTCCCTTCCCTGAACTGGCAATCATTGATCTTCCAACTTCACAGTTTTGCCTTTTCCAGAATGTCATATAGTTGGAATCATACAGTCTGGGTCTTTTCTGATGGGGCTTCTTTTACTTAGTACAATGCAGTCAAGCTTCCTCCACGTCTGTTCATGGCTTGATGGATGATTTTTTTTTTTTTAGCACTGAATAATATTCCATTGCCTGGATATTGCACTGTTTAGCCATTTGCCTTTGAAGGACACCTTGATTGCTTATAGTTTGGGGCAATTGTGAATAAAGTTGCAATAAACATTCATGTGTTGTTTCTTGTGTGGATACAAGTTTTCAACTCCTTTGGGTAAATACCAAGAAGTACAATTGCTAGATCATATGGTAAAAGGATGTTTAGTTTTGTAAGAAACTGCTAAACTGTCTTCCAAAGTAGCTATACCATTCTGCACTCCTACAAACAATGAATGGGAGTTTTTGTTGCTCCATATCCTTGTCAGCATTTGGTGTTGACAGTGTTCTGGGTTTTAGCCATCCTGATAGGTATGAAAGGCTAGAATATTTTTAGTAATAGGACAGAACATTCCAATTGTAGGGTTAATAATAGTTGTTTTAATCTCTAGTATAGTTTTTATAATTAAATATCCTGCAATAGCTTTTAGTTTAGAGAACCACCCGTCATCATGAAATCATAATTCACTCATGCAAATTTGAGAGATAAAATCATCCTTTCACTAAAACCATCAGTACTCTTATTATATAAACATAGCATTACAACAAAAAATGCTGTTATGTCAAATCAAAGTAAATGCAATTTAAACTTCTTCTTAGCCCCATCTTTCCTTTAATACATGTATTGTTACACCCCATAGAGCAAAAGAAAAAAACCAGTGCACACAATATAGAGTAATAATGTTTAGTGATGTTGTAGGGAATTTAAAAGGTAAGAAAAGGAGGATGCTGTGATAATTCCTCAAGAGGTGATTGGGGCCAGATGAGGTAGCTCAATCCTGTAATCCCAGCACTTTGGGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4816:HG2_PB_PB10Xdip_31759:HG3_PB_SVrefine2Falcon1Dovetail_6275:HG2_PB_SVrefine2Falcon1plusDovetail_12436:HG4_PB_SVrefine2PBcRDovetail_5211:HG2_PB_SVrefine2Falcon2Bionano_4916:HG2_Ill_SVrefine2DISCOVARplusDovetail_13641:HG2_10X_SVrefine210Xhap12_7396:HG2_PB_SVrefine2PBcRplusDovetail_11634:HG2_PB_SVrefine2PB10Xhap12_7597;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7396:HG2_Ill_SVrefine2DISCOVARplusDovetail_13641:HG2_PB_SVrefine2Falcon2Bionano_4916;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00179711;ClusterMaxSizeDiff=0.00179695;ClusterMaxEditDist=0.00637658;PBcalls=8;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=11136;DistBack=20754;DistForward=241;DistMin=241;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=225;REFWIDENED=9:90814783-90815007;PctSeqSimilarity=0.9989;PctSizeSimilarity=0.9997;PctRecOverlap=0.9891;SizeDiff=3;StartDistance=-119;EndDistance=-119;GTMatch=0;TruScore=99;MatchId=5679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:1:14:1:20:./.:0:0:0:0:./.:0:1:1/1:0:618:.:11060:.
chr9	91274544	HG2_PB_PB10Xdip_31761	C	ACATGACTGCACTCCAGCCTCCAGCCTGGGCGACAGGGTGAGACTTCCTCTCAAAAAAAAAAAAAAAAAAAAAAAGAATACGCATGACAGCTTCAATTGCCAACAGTTCACCTTTGTTCTCTAAGATGAGTTTGAATCTAAAAATCAGTCAATTATCAGTAGGTGTCAAATCTTATTAAGAAAGCTAGTCATGAAGCAGGGTAATCAAATAGAAGTAGAAAAAACTGACTGCTCTTTCATCCATGACCTATAAGCTGGTTGAGAAGTTGGTTCCATGTGAGGAAGCTAGTATTTATGGTACCATATTTGGAAGGGAGGGTCTCCAGCAGGTATTTAGTAACTACCATTTCACTGTCAGAATTTGATGTGTACAACTCATTTAAAGAGTCTGATGCTCCATTTAAAGAACACTCCTGGCCCAATAGGGTGGCTCATACCTGTTGGGGAGGCTGAGGTGAGAGGAGCACTTGAGGCCAGGAGTTTGAGACCAGCTTGGGCAACACAGCGAGACCCTGTCTCTACAAAAATAAAAAAGAAAGTATCTGGGTATAGTGGCGTGTGCCTGTGGTCCCAACTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAGTTCAGGAGTTAGAGGTTACAGTGAGCTATGATTGTGCCACTGCACCCCAGCCTGGGTGGCAGAAACCCTGTCTCCCTGTCTCTTAAGAAAAAAAATAATAAATAAAAGGAACACTTCTACCTTGCAGGAGAGCTGGGAAGCAATTTGGCAATGAAGACTTTAAATATCTCAAGAATACCATGAAACAGGGCCAGTTGCAGGTTGAGTCCTGTGTCTGGGCCCTAATTTCCTTGTGACTGGGCTCCTGGTGATCATGCAGTTGTCTTCTGGATGAAAGGAGCTGTCTGCGGAGAGATCTCAGTGGCCACCTGAAGATAAAGGGAAGAGAGTCTTCAGGGCCCCAACCCACTTCAACCAGAGTACCTTTTCTTTCATTAATTTGATGGGTTTTTTCTTAATTAAAAAAAACTTTTAATTGTTGTGAGCATATTGTGTGTGTGTGTGTATATATATATGTGTTATGTATACGTATATATATATATATATACACACACACACACACACGGGGTACATGAGATGTTTGGATACAGGCATGCAATGCATACTAATCACATGATGGAAAACGGAGATATTCATTCCCTCAAGCATTTATTCTTTGTGTTACAAACAATCTAATTGTACTTTGTTATTTTAAAATGTACAATTAAATTATTATTGACTACTGTCACCCTGTTTTGCTAGCAAATACTAGGTCTTATTCATTCTTTCTATCCCCTCCTACCCCCCAGCCTCCTACTGCCCTTCCCAGCCTCTCGTAACCATCCTTCTATTTTCTATCTCCATGAGTTCAATCATTTTGATTTTTAGATCCCACAGATAAGTGAGAAGATACGATATTTGTCTTTCTGTGCCTGACTTACGTTACTTAACATAATGACTTCCAGTTCCATCCATGTTGTTGCAAATGACAGGATCTCTTTCTTTTTTGTGTGTCTGAATAATACTCCATTGTGTATACGTACCACATTTTTTTTACCTGTTCATCTGTTGATGAACACTTAGGTTGCTTCCAGATCTTGGCTATTGTGAACAGTGCTGCAAAAAACACAGGAATGCAGTTATCTCTTCAATATATTGATTTCCATTCGAGCATGTGCCCAGCAGTGGGATTACTGGATCATATGGTAGCTCTATTTTTAGTTTTTTGAGAAACCTCCAGATTGTTCTCCATAGTAGTTATACTAATTTACATTTCCACCAACAGTGTATGGGATTTCCTTTTCTCTACATTCTTGTCAGCATTTGTTGTTGCCTGACTTTTGGGTAAAAGCCATTTTAACTGGGGTGAGATGATATCTCATTGTAGTTTTGGTTTGCATTTCTCTGGTGATCAACGATGTTGAGGACCTGTTCATATGTCTGTTTGCCATGTGTATGTTTTCTTTAGAGAAATGTCTATTCAAATATTTTGCCTTTTTTTGATTGGATTGGTAAATTCTTTCCTTTAGAGTTGTTTGAGCTCCTATATATTTTGGTTATTGATCCCTTGTCAGAGTGGCAGTTTGCAGATATTTTCTCCCATTCTGTGAGTTGTCTCTTCACTTTGTTGATTGTTTCCTTTGCTGTGCAGAAGCTTTTTAACTTGATGTGTTCCCATTTGTCCATTTTTACTTTGGTTGCTTGCACTTATGGGGTACTATTCAAGAAACCTTTGCCCAGACCAATGTCCTGGAGAGCTTCCCCAGTGTTTTCTTGTAACAGTTTCACAGTTTGAGACCTTAGATCTAAGTCTTTAATCCATTTTAATTTGATTTTTGTATATGGCAAGAGATAGGGGTCTAGTTTCATTCTTCTGTATATGGATATCCAGTTTTCCTGGAGCCATTTATTGAAGAGACTGACCTTTCTTCAATGTATGTTCTTGGCACCTTTGTTGAAAATGAGTTCACTGTAGGTGTGCGGATTTGTTTCTGGGTTCTCTATTCTGTTCCATTGGTCTGTGTGTCTGTTTTTATGCCAGTACCATGCTGTTTTGGTTACTACAGCTCTGTAGTATAATTTGAAGTCAGGTAATGTGATCCCTCCAGTTTTGTTCTTTTTGCTTAGGATAGCACTGGCTATTTTGGGTCTTTTGTGATTCCACATAAATTTTAAGATTTTTTTTTTCTGTTTCTGTGAAGAATGTCATTGTTATTTTAATAGGGATTGCATTTAATCTGTAGATAGCTTTGGATAATATGGACATTTTAACAATATTTATTCTTCCAATCCATGAAAATGAAATATCTTTTCATCTTTGCTGTCCTCTTCAATTTCTTTCAGTCCCCTCACCTCATGGATTGAATCCCAGGCCACCACACAGGAGCCAAAGAGGCCAGGCTCCTCCCTCCTCCCTGTGGCTCTGCCCCATTCCCCAGGGTTCACGTGGGCATGCTCAGACAAGGCCCTGGGCAGGTTCCCTCATCTGCACAAAAGCACCTGATGTAAACACTTGTGGGGTAAGTCGGAAATTCTCTGAGGACCCCTTTTTATCTGCCTAGGCATTTGGCCTTCTCATTTGCATGATGTTAAACATTATCTTTGTCACCTAAATAAACTGCAAGTTCTGTTAATGTTGCTCAGTCAGTCACTATTCATGAGTAGTGACCTAGACCTATATGGCCTAAGTCTGTGCAACCAGAGCCTAAATGCTCCTAATAGTGCAGCCTTCAGCCTCTGTCACTTCCTCAGGGAGGCGATTGCAGAGCTGGATAGATCCCTTCGATTGGCTCTTTTTTTTTTTTTAATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGTATTTGGCAGGGTCATAGGACAATAGTGGAGGGAATGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGGGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCACAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACCTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCGCCTTTCCCCTCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGCTCCTCACTTCCCAGTAGGGGCGGCGGGCAGAGGCGCCCCTCACTCCCGGGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGCAGAGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGAGGCAGCTGGCTGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCGGGGCAGAGGCGCCCCTCACCTCCCAGAGGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGCGGCTGCCGGGCGGAGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCGGAGGGTCTCCTCGCTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCGCGGCCGGGTAGAGGCGCTCCTCACATCCCAGACGGGGCGGCGGGGCAAAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGGGCAGAGACGCTCCTCACTTCCAGACTGGCAGCCAGGCAGGGCCCTCACGTCCCGACGATGGCGCCAGCAGAGACGCTCCTCACTTCCAGAGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGGTGGGAGGTGGAGGTTGTAGCCAGCCGAGATCACGCCACTGCGCTCCAGCCTGGGCACCATTGAGCACTGAGTGAACCAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGGGCTGGCGATCACTCGCTGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAACCCCATCTCCACCAAAAAAATACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCACAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGCTGGGCATCAGAGGGAGACCGTGGAAAGAGGGGACAGGGACAGGGACAGGGACAGGGAGAGGGAGAGGGCGAGGGAGAGGGAGAGGACTTCCCAACACTTCTAAAGACTCTCGATTGGCTCTTAACTAAGAGCTTTCCATTTTATCTCTCTCCTTTTTGTCTCTTCAAATGAATACATTTCACAAAGGTATAGAAAGTTACTGTGGGAGCATCACTCTTCTTGTAAATGAAGGCAGCCATCACTGAAACATTGTTTAGAGCCACTTTGAGAGCAAAATGATGACAAATTTTAATGACAACAAATGTCAGCCTCAACCAGATATAAGCTCAAGAAATAAGAACACTCATCATTATTCTTATTTGTCAGCAATAAACAGCTGGAAAATAAAATGGCACCATGAAAATGAACTACTTAGGCATTATCTAATAAGAATGTATAAGACGTTTATGGAGGAAAAACTTAAGTCACTATTACAGGACATGAAAGAAGACCTAAATAAATGGAAAGATAAGCCATATTAATGGAGGGGAAGACATCATTTATCAAGAAGCTGATTTTTCAAATGTTTAATATAACTGCAAGGAAAATCCTAGCAGAATATCTAGGGAAACAAAACAGTGATTTTAGGCCAGGTGAGGTGGCTCACGCCTGTAATCACAGAATTTTGGGAGGCCAAGGTGGGTGGATTGCTTGAGGTCTGGAGTTCGAGACTAGCCTGGCCAATGTGGTAAAACCCCATCTCTACTAAAATACAAAAATTAGCCAGGCAAGGTGGCGGGCACCTGTAATCCCAGCTACTAGGGAGGCCGAGGCAGGAGAACTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7600:HG4_PB_pbsv_10408:HG2_PB_pbsv_10381:HG3_PB_pbsv_10121:HG2_PB_PB10Xdip_31761:HG3_PB_HySA_15709:HG4_PB_HySA_15243:HG2_PB_HySA_18854:HG3_PB_assemblyticsfalcon_27781:HG2_PB_assemblyticsPBcR_27127:HG3_PB_SVrefine2Falcon1Dovetail_6279:HG3_PB_SVrefine2PBcRDovetail_4820:HG4_PB_SVrefine2PBcRDovetail_5215:HG4_PB_SVrefine2Falcon1Dovetail_6371:HG2_PB_SVrefine2PBcRplusDovetail_11637:HG2_PB_SVrefine2Falcon2Bionano_4919:HG2_PB_SVrefine2Falcon1plusDovetail_12439;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_31761;NumExactMatchSVs=1;ClusterMaxShiftDist=0.168517;ClusterMaxSizeDiff=0.168517;ClusterMaxEditDist=0.236507;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=5908;DistBack=-55;DistForward=13288;DistMin=-55;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=272;REFWIDENED=9:91274328-91274599;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.9961;PctRecOverlap=0.9944;SizeDiff=-23;StartDistance=22;EndDistance=22;GTMatch=1;TruScore=99;MatchId=5680.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:84:1/1:0:35:1:34:./.:0:0:0:0:1/1:1:46:1/1:2:720:.:6759:.
chr9	91304356	HG4_Ill_GATKHCSBGrefine_7227	G	GATTTGTCTGTAAGGTTTTATTAAAAATTGGATTTAACATTAATAGTATACTAATGTAAAGGTGACATTTGGCTTACTTGGTGTAAAAATCATACAGGAAGCGCTGTCAAATATGAAATGGTATTTGGCTTTCTTTGGGCTGTATTTGTATAACTCTGTTATTGGTATGTGTTTCAAAATTATAGTAAACTCCTATAATTCTGATATAATTAAGTGTATGTTATTAATAATTATAAATGTTACATAAAATTATTGTATACCACAGAGGTAACAAAATTTCTTTGTCAATCGTGTT	20	PASS	ClusterIDs=HG3_PB_pbsv_10122:HG4_PB_SVrefine2PBcRDovetail_5216:HG4_Ill_SVrefine2DISCOVARDovetail_7522:HG2_Ill_SVrefine2DISCOVARplusDovetail_13643:HG2_10X_SVrefine210Xhap12_7398:HG4_PB_SVrefine2Falcon1Dovetail_6372:HG2_PB_SVrefine2Falcon1plusDovetail_12441:HG2_PB_pbsv_10383:HG3_PB_assemblyticsfalcon_27782:HG3_PB_SVrefine2Falcon1Dovetail_6280:HG4_Ill_MetaSV_5632:HG4_Ill_GATKHCSBGrefine_7227:HG3_Ill_manta_2431:HG3_Ill_SVrefine2DISCOVARDovetail_7748:HG3_Ill_MetaSV_5579:HG3_Ill_GATKHCSBGrefine_7000:HG2_Ill_manta_2970:HG2_Ill_MetaSV_5400:HG2_Ill_GATKHCSBGrefine_7098:HG2_PB_assemblyticsfalcon_27880:HG2_PB_SVrefine2Falcon1plusDovetail_12440:HG2_Ill_breakscan11_4078:HG4_PB_pbsv_10409;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7098:HG2_Ill_MetaSV_5400:HG2_Ill_manta_2970:HG3_Ill_GATKHCSBGrefine_7000:HG3_Ill_MetaSV_5579:HG3_Ill_SVrefine2DISCOVARDovetail_7748:HG3_Ill_manta_2431:HG4_Ill_GATKHCSBGrefine_7227:HG4_Ill_MetaSV_5632;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0627063;ClusterMaxSizeDiff=0.0594059;ClusterMaxEditDist=0.259016;PBcalls=10;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=294;DistBack=-1;DistForward=1710;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=9:91304357-91304356;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:18:0|1:24:0:4:17:./.:0:0:0:0:0/1:29:20:./.:.:.:.:.:.
chr9	91589326	HG3_PB_SVrefine2PBcRDovetail_4822	A	ACCACACACAAACACACACAGATGACACAACACACACGCACATACCACACACACAGACCACACAACACACATTCACACACCACATACACAGACTACACAACACACAACACACCCATACACCACACACAAACACATGCACACAACATACCACACACACACAAACACATACAGATTACACAACATACAATACAGACAACACACAGACATATGCAAACTACACAACACACATTACACAATACAAACATCACACACAAACACATGCAGACTACACAACACACAAAATACAAATAAGTGCAGACTATACAACACACACACCACACAAACACATGCATACCACACAATACACACACCATAGACACTACGTACAACAGACACACCACACACCACACAAGCACATGCACACAACACCACACACAACACACTCATGCACCAGACAATACTACACTATACATACACACCACACACCACACTATATC	20	PASS	ClusterIDs=HG3_PB_pbsv_10126:HG3_Ill_MetaSV_5581:HG4_PB_pbsv_10413:HG4_Ill_GATKHCSBGrefine_7231:HG2_PB_pbsv_10387:HG2_Ill_manta_2973:HG4_Ill_MetaSV_5634:HG2_PB_PB10Xdip_31763:HG2_Ill_breakscan11_4079:HG4_PB_SVrefine2Falcon1Dovetail_6376:HG4_PB_SVrefine2PBcRDovetail_5220:HG4_Ill_SVrefine2DISCOVARDovetail_7526:HG3_PB_SVrefine2PBcRDovetail_4822:HG2_PB_SVrefine2PBcRplusDovetail_11640:HG2_PB_SVrefine2PB10Xhap12_7603:HG2_PB_SVrefine2Falcon2Bionano_4922:HG2_PB_SVrefine2Falcon1plusDovetail_12446:HG3_PB_SVrefine2Falcon1Dovetail_6284:HG3_Ill_SVrefine2DISCOVARDovetail_7752:HG2_Ill_SVrefine2DISCOVARplusDovetail_13647;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12446:HG2_PB_SVrefine2Falcon2Bionano_4922:HG2_PB_SVrefine2PB10Xhap12_7603:HG2_PB_SVrefine2PBcRplusDovetail_11640:HG3_PB_SVrefine2PBcRDovetail_4822:HG4_Ill_SVrefine2DISCOVARDovetail_7526:HG4_PB_SVrefine2PBcRDovetail_5220;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0671414;ClusterMaxSizeDiff=0.0671414;ClusterMaxEditDist=0.282306;PBcalls=12;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=475;DistBack=14941;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=120;REFWIDENED=9:91589327-91589446;PctSeqSimilarity=0.9919;PctSizeSimilarity=0.9937;PctRecOverlap=0.9624;SizeDiff=-3;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=98;MatchId=5682.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:53:1/1:3:33:2:17:./.:0:0:0:0:1/1:0:11:1/1:1:93:.:.:.
chr9	91654925	HG2_PB_SVrefine2Falcon1plusDovetail_12447	C	CCACCACCACCACCATCGGCATCACCACCATCTCACCACCATTATCACCATCACCACCACCACCTTTGCCACCAGCACCATCATCAGCATCATCACCACCATCATCACCACCACCAGCACCATCAGCAGCAGCATCACCACCATCATCATCACCATCATCATCACTATCAACACCACCACCATCAGCAGCATCATCACCATCATCATCATCACCACCACCATCATCAACATCACCATCATCATCACTGTCACCACCACCACTATCATCATCAGCAGCAGCAGCAGCATCAT	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_7753:HG2_PB_PB10Xdip_31764:HG4_PB_pbsv_10414:HG2_PB_pbsv_10388:HG3_PB_pbsv_10127:HG4_Ill_MetaSV_5635:HG4_Ill_GATKHCSBGrefine_7232:HG3_Ill_manta_2432:HG3_Ill_MetaSV_5582:HG3_Ill_GATKHCSBGrefine_7004:HG2_Ill_GATKHCSBGrefine_7102:HG4_PB_HySA_15246:HG2_Ill_MetaSV_5402:HG4_PB_SVrefine2PBcRDovetail_5221:HG4_PB_SVrefine2Falcon1Dovetail_6377:HG4_Ill_SVrefine2DISCOVARDovetail_7527:HG3_PB_SVrefine2PBcRDovetail_4823:HG2_PB_SVrefine2PBcRplusDovetail_11641:HG2_PB_SVrefine2PB10Xhap12_7604:HG2_PB_SVrefine2Falcon2Bionano_4923:HG2_PB_SVrefine2Falcon1plusDovetail_12447:HG2_Ill_SVrefine2DISCOVARplusDovetail_13648:HG3_PB_SVrefine2Falcon1Dovetail_6285;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12447:HG2_PB_SVrefine2Falcon2Bionano_4923:HG2_PB_SVrefine2PB10Xhap12_7604:HG2_PB_SVrefine2PBcRplusDovetail_11641:HG3_PB_SVrefine2PBcRDovetail_4823:HG4_Ill_SVrefine2DISCOVARDovetail_7527:HG4_PB_SVrefine2Falcon1Dovetail_6377:HG4_PB_SVrefine2PBcRDovetail_5221;NumExactMatchSVs=8;ClusterMaxShiftDist=0.130933;ClusterMaxSizeDiff=0.12766;ClusterMaxEditDist=0.276771;PBcalls=13;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=290;DistBack=11486;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=241;REFWIDENED=9:91654926-91655166;PctSeqSimilarity=0.9484;PctSizeSimilarity=0.9732;PctRecOverlap=0.2542;SizeDiff=-8;StartDistance=-219;EndDistance=-219;GTMatch=0;TruScore=72;MatchId=5683.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:54:1/1:4:21:1:32:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr9	91674671	HG2_PB_assemblyticsfalcon_27887	G	GTGTGGAGGACAGTGGTGGAGGACATGGTGGAGGATGGTGGTGGAGGATATGATAGGATGTGGTGGAGGACGTTCTAGAAGACGTGGTGGAGGACGTGGTGGAGGAT	10	PASS	ClusterIDs=HG3_PB_pbsv_10128:HG2_PB_assemblyticsfalcon_27887:HG2_PB_pbsv_10389:HG2_PB_SVrefine2Falcon1plusDovetail_12448;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsfalcon_27887;NumExactMatchSVs=1;ClusterMaxShiftDist=0.106667;ClusterMaxSizeDiff=0.0977778;ClusterMaxEditDist=0.247863;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=106;DistBack=0;DistForward=91634;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=9:91674670-91674674;PctSeqSimilarity=0.9818;PctSizeSimilarity=0.9636;PctRecOverlap=0.964;SizeDiff=-4;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=96;MatchId=5684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:22:./.:13:5:4:15:./.:0:0:0:0:./.:1:1:./.:.:.:.:.:.
chr9	91869036	HG4_PB_SVrefine2Falcon1Dovetail_6378	A	ATGGCGTGTTCGAGTGTGGTGTGTGTGTGCTGTTTGTGATGTATGTGGTGAGTGTGGTGTGTGTGCTGTGTGTGATGTATGTGGTGAGTGTAGCGTGTGTGAGTGTGTGGTGTGTGTGGTGTGTGTGATGTGTGTATGTGGTGAGTGTGGCATGTGTGAGTGTGTGGTGTGTGTGCTGTGTGTGATGTGTGTATGTGACGAGTATGGCATGTATGAGTGTGGTGTGTGTGGTGTGTGTGGTGTATGTGGTGAGTGTGACGTGTGTGTGGTGTGAGTGTGTGCTGTGTGTGGTGTATGTGGTGAGTGTGGCGTGAGTATGTGCTGTGTGTGGTGTGTGTATGTGGTGAGTGTGGTGTATGTGAGTGTGTGCTGTGTGTGGTGTGTGTATGTGGTGAGTGTGGCGTGAGTGTGTGGTGTGAATGTGTGCTGTGTGTGCTGTGTGTATGTGGTGAGTGTGGTGTGTGTGTGTGCTGTGTGTATGTGGTAAGTGTGGCGTGTGTGTGTGCTGTGTGTGGTGTGTGTATGTGGTGAGTGTGGCGTGAGTGTGTGGTGTGAATGTGTGCTGTGTGTGATGTGTGTATGTGGTGAGTGTGGTGTGTGTGTGCTGTATGTGGTGAGTGTGTGGTGTTGAGTGTGGTGTGTGTGGTGTGAGTGTGGCGTGTATGAGTGTGTGATGTGTGTGTTGTGTGTGATGTGTGTATGTGGTGAGTGTGACGTGTGTGTGGTGTGTGCTGTGTGTGCTGTATGTGATGAGTGTGGCACGTATGAGTGTGGTGTGTGTGTTGTGTGTGGTGCATGTATGTGGTGAGTGTGACGTGTGTGTGTGGTGTGTGTGCTGTGTGTGGCATATGTGGTGAGTGTGGCACGTGTGTGTGCTGTGTGTGATGTGTGTATGTGGTAAGTGTGGTGTGTGTGGTGTGTGTGCTGTGTGTGGTGTGTGTATGTGGTGAGTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6286:HG2_PB_pbsv_10390:HG2_PB_PB10Xdip_31765:HG4_PB_pbsv_10416:HG3_PB_pbsv_10129:HG2_Ill_breakscan11_4080:HG3_PB_HySA_15711:HG2_PB_HySA_18863:HG3_PB_HySA_15710:HG2_PB_SVrefine2Falcon1plusDovetail_12449:HG2_PB_SVrefine2PB10Xhap12_7605:HG4_PB_pbsv_10415:HG2_PB_SVrefine2Falcon2Bionano_4924:HG2_PB_SVrefine2PBcRplusDovetail_11642:HG4_PB_SVrefine2PBcRDovetail_5222:HG4_PB_SVrefine2Falcon1Dovetail_6378:HG3_PB_SVrefine2PBcRDovetail_4824;NumClusterSVs=17;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_6378:HG4_PB_SVrefine2PBcRDovetail_5222;NumExactMatchSVs=2;ClusterMaxShiftDist=0.176744;ClusterMaxSizeDiff=0.176744;ClusterMaxEditDist=0.315133;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=952;DistBack=102699;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=315;REFWIDENED=9:91869037-91869351;PctSeqSimilarity=0.9711;PctSizeSimilarity=0.9744;PctRecOverlap=0.6663;SizeDiff=-25;StartDistance=-314;EndDistance=-314;GTMatch=0;TruScore=87;MatchId=5685.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:80:1/1:1:35:0:23:./.:0:0:0:0:./.:0:0:1/1:6:150:.:1113:.
chr9	93057511	HG2_PB_SVrefine2PB10Xhap12_7608	T	TAACACACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4081:HG3_PB_pbsv_10133:HG2_PB_PB10Xdip_31769:HG2_PB_pbsv_10396:HG2_PB_SVrefine2PBcRplusDovetail_11646:HG2_PB_assemblyticsPBcR_27146:HG2_PB_assemblyticsfalcon_27900:HG3_PB_assemblyticsfalcon_27800:HG4_PB_pbsv_10422:HG2_PB_SVrefine2PB10Xhap12_7608:HG2_PB_SVrefine2Falcon2Bionano_4929:HG2_Ill_GATKHCSBGrefine_7105:HG2_10X_SVrefine210Xhap12_7406:HG4_Ill_MetaSV_5636:HG2_PB_SVrefine2Falcon1plusDovetail_12455:HG2_Ill_MetaSV_5403:HG4_PB_SVrefine2Falcon1Dovetail_6381:HG4_Ill_GATKHCSBGrefine_7235:HG3_PB_SVrefine2Falcon1Dovetail_6289:HG2_PB_HySA_18871;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7406:HG2_Ill_GATKHCSBGrefine_7105:HG2_PB_SVrefine2Falcon2Bionano_4929:HG2_PB_SVrefine2PB10Xhap12_7608:HG2_PB_SVrefine2PBcRplusDovetail_11646;NumExactMatchSVs=5;ClusterMaxShiftDist=0.168712;ClusterMaxSizeDiff=0.168712;ClusterMaxEditDist=0.240126;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=317;DistBack=16118;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=9:93057512-93057522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:./.:8:14:2:17:./.:0:0:0:0:1/1:0:25:1/1:3:110:.:.:.
chr9	94397270	HG2_PB_SVrefine2Falcon2Bionano_4934	G	GGAGGAGGAGAAGGAAGAGGCAGAGGAGGAAGAGGCGGAGGAGGAGGAAGAGGAGGGGGAGGAAGAGGAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4934:HG2_Ill_breakscan11_4082:HG2_PB_assemblyticsfalcon_27908:HG4_PB_pbsv_10430:HG2_PB_PB10Xdip_31776:HG4_Ill_GATKHCSBGrefine_7249:HG3_Ill_scalpel_10078:HG3_Ill_GATKHC_16795:HG2_Ill_GATKHC_16863:HG4_PB_assemblyticsfalcon_27318:HG3_PB_HySA_15731:HG2_PB_HySA_18889:HG4_PB_HySA_15267:HG3_PB_assemblyticsfalcon_27811:HG3_PB_SVrefine2PBcRDovetail_4832:HG3_PB_pbsv_10143:HG2_PB_SVrefine2PBcRplusDovetail_11652:HG2_PB_SVrefine2PB10Xhap12_7614;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4934:HG3_PB_SVrefine2PBcRDovetail_4832:HG2_PB_SVrefine2PBcRplusDovetail_11652:HG2_PB_SVrefine2PB10Xhap12_7614;NumExactMatchSVs=4;ClusterMaxShiftDist=0.144928;ClusterMaxSizeDiff=0.144928;ClusterMaxEditDist=0.333333;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=94;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=99;REFWIDENED=9:94397271-94397369;PctSeqSimilarity=0.9665;PctSizeSimilarity=0.9583;PctRecOverlap=0.1096;SizeDiff=-3;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=67;MatchId=5687.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:42:1/1:5:17:2:14:./.:0:0:0:0:0/1:3:7:./.:.:.:.:.:.
chr9	96381011	HG3_PB_SVrefine2Falcon1Dovetail_6302	C	CCTGTGTGTATGTGTGTGTGTATGCCTGTGTTTGTGTGTCTGCATGTGTTTGTGTTTGTATCTGTGTATTTCTGTGTATGAGGGTGTCTGCATGTGTGATGTGTGTGGTGTGTGTGTGTGCCTGTGTGTGGTGTTCGTGTGTCTCTGTGTTTGCATATGTTTGTGTGTGTTTCCATGTGTGTGTTTGCATATGTGGTATGTGTGATGTGTGTGTGCATGTGTCTGTTTTGTGTTTGCATGTGTGTTTTGTGTGTGTGCCTGGATGTGTGGTATGTGTGTGTGCCTGGAGGTGTGGTGTATGTGTACCTGTGTGTCTGTGTGTGTAATGTGTGTGGCTGCGTGTGTGGTGTTTGTGTGTCTGCGTGTGTGTGGTGTGTGTTGTGTGTTTGCCCGTGTGGTGGGTGTGTCTGTGTCTGCATGTGTGTGGTGTGTGTGTCTGTATGTATGTTGTATATTTCTGTGTGCATGTGTGGTGTGTTTCTGTCTGTGTGTGATGTGTGTGTGTCTGTGGGGTGTATGTGTCTGCGTGTGTATTTGTGTCTGCATATGTGTGGTGTGTTTGCGTGTTTGGGGTATGTATGTGTGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7417:HG4_PB_pbsv_10441:HG2_Ill_breakscan11_4085:HG2_PB_pbsv_10414:HG2_PB_PB10Xdip_31792:HG2_PB_PB10Xdip_31791:HG3_PB_pbsv_10157:HG3_Ill_MetaSV_5589:HG4_Ill_MetaSV_5641:HG3_Ill_GATKHCSBGrefine_7025:HG2_Ill_manta_2981:HG4_Ill_GATKHCSBGrefine_7256:HG2_Ill_MetaSV_5407:HG2_Ill_GATKHCSBGrefine_7119:HG3_Ill_SVrefine2DISCOVARDovetail_7770:HG4_PB_SVrefine2PBcRDovetail_5236:HG4_PB_SVrefine2Falcon1Dovetail_6395:HG4_Ill_SVrefine2DISCOVARDovetail_7548:HG3_PB_SVrefine2Falcon1Dovetail_6302:HG2_PB_SVrefine2PBcRplusDovetail_11658:HG2_PB_SVrefine2PB10Xhap12_7621:HG2_PB_SVrefine2Falcon1plusDovetail_12464:HG2_Ill_SVrefine2DISCOVARplusDovetail_13665;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7417:HG4_PB_SVrefine2PBcRDovetail_5236:HG4_PB_SVrefine2Falcon1Dovetail_6395:HG4_Ill_SVrefine2DISCOVARDovetail_7548:HG3_PB_SVrefine2Falcon1Dovetail_6302:HG2_PB_SVrefine2PBcRplusDovetail_11658:HG2_PB_SVrefine2PB10Xhap12_7621:HG2_PB_SVrefine2Falcon1plusDovetail_12464:HG2_Ill_SVrefine2DISCOVARplusDovetail_13665;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0834697;ClusterMaxSizeDiff=0.0818331;ClusterMaxEditDist=0.211523;PBcalls=11;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=585;DistBack=3551;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=214;REFWIDENED=9:96381012-96381225;PctSeqSimilarity=0.9698;PctSizeSimilarity=0.9734;PctRecOverlap=0.7072;SizeDiff=-16;StartDistance=-168;EndDistance=-168;GTMatch=0;TruScore=88;MatchId=5688.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:37:1/1:0:26:0:14:./.:0:0:0:0:1/1:0:27:1/1:1:78:.:.:.
chr9	96580782	HG2_Ill_GATKHCSBGrefine_7123	G	GAGGAAGGAAGGAAGGGGAGGGAAAGAAGGAAGGAAGGAAAGGAAGGAAGGGAAAGAAGGAAGGA	20	PASS	ClusterIDs=HG2_PB_HySA_18914:HG3_PB_pbsv_10160:HG3_Ill_scalpel_10094:HG3_Ill_manta_2439:HG3_Ill_Spiral_11016:HG3_Ill_Krunchall_14138:HG3_Ill_GATKHC_16816:HG3_Ill_GATKHCSBGrefine_7028:HG3_Ill_250bpfermikitraw_13709:HG3_Ill_150bpfermikitraw_13275:HG2_Ill_scalpel_9969:HG2_Ill_SpiralSDKrefine_17981:HG2_Ill_Krunchall_14410:HG2_Ill_GATKHC_16883:HG2_Ill_GATKHCSBGrefine_7123:HG2_Ill_150bpfermikitraw_13232:HG3_PB_HySA_15763;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13232:HG2_Ill_GATKHCSBGrefine_7123:HG2_Ill_GATKHC_16883:HG2_Ill_Krunchall_14410:HG2_Ill_SpiralSDKrefine_17981:HG2_Ill_scalpel_9969:HG3_Ill_150bpfermikitraw_13275:HG3_Ill_250bpfermikitraw_13709:HG3_Ill_GATKHCSBGrefine_7028:HG3_Ill_GATKHC_16816:HG3_Ill_Krunchall_14138:HG3_Ill_Spiral_11016:HG3_Ill_manta_2439:HG3_Ill_scalpel_10094;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0451128;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.0902256;PBcalls=3;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=21863;DistForward=130;DistMin=130;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=9;REFWIDENED=9:96580781-96580792;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5689.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:54:19:./.:41:5:15:17:./.:0:0:0:0:0/1:11:6:./.:.:.:.:.:.
chr9	96909755	HG2_PB_SVrefine2PB10Xhap12_7631	T	TGGCCAGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGGCGAAGCCTCGTCTCTCTTAAAAATACAAAATTAGCCGGGCATGGTGGCACATGCCTGTAATCCCAGATACTCGGGAGGCTGAGGCAGAAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCTGTGAGCCGAGATCACGCCATTGCACCCCAGCCTGGACAACAAGAATGAAACTCCGTCTCAAAAAAAAAAAAGAGTCTAAAAAATCTAAGAACC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6399:HG2_Ill_breakscan11_4086:HG2_PB_pbsv_10420:HG4_Ill_MetaSV_5644:HG3_PB_pbsv_10163:HG4_PB_pbsv_10445:HG3_Ill_MetaSV_5591:HG2_Ill_MetaSV_5410:HG3_PB_HySA_15768:HG4_PB_HySA_15289:HG2_PB_PB10Xdip_31804:HG2_PB_PB10Xdip_31803:HG2_PB_SVrefine2Falcon1plusDovetail_12470:HG4_PB_SVrefine2PBcRDovetail_5241:HG3_PB_SVrefine2PBcRDovetail_4840:HG3_PB_SVrefine2Falcon1Dovetail_6306:HG2_PB_SVrefine2PBcRplusDovetail_11662:HG2_PB_SVrefine2PB10Xhap12_7631:HG2_PB_SVrefine2Falcon2Bionano_4941:HG2_10X_SVrefine210Xhap12_7421;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7421:HG2_PB_SVrefine2Falcon2Bionano_4941:HG2_PB_SVrefine2PB10Xhap12_7631:HG2_PB_SVrefine2PBcRplusDovetail_11662:HG3_PB_SVrefine2Falcon1Dovetail_6306:HG3_PB_SVrefine2PBcRDovetail_4840:HG4_PB_SVrefine2PBcRDovetail_5241;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0764526;ClusterMaxSizeDiff=0.0672783;ClusterMaxEditDist=0.313846;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=316;DistBack=99419;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=316;REFWIDENED=9:96909756-96910071;PctSeqSimilarity=0.9563;PctSizeSimilarity=0.9937;PctRecOverlap=0.0564;SizeDiff=-2;StartDistance=-300;EndDistance=-300;GTMatch=0;TruScore=66;MatchId=5690.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:23:0:7:./.:0:0:0:0:1/1:0:19:./.:1:12:.:.:.
chr9	99186853	HG2_Ill_scalpel_9986	G	GTGTGTGTGTGTGTATATATATATATACACACACACACATATATATGTATGTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7426:HG2_PB_HySA_18942:HG2_PB_pbsv_10430:HG4_PB_pbsv_10458:HG3_PB_pbsv_10173:HG4_Ill_250bpfermikitraw_13993:HG2_PB_PB10Xdip_31814:HG2_PB_PB10Xdip_31813:HG4_Ill_150bpfermikitraw_13395:HG3_Ill_scalpel_10114:HG3_Ill_Spiral_11027:HG3_Ill_Krunchall_14155:HG3_Ill_GATKHC_16839:HG3_Ill_GATKHCSBGrefine_7040:HG3_Ill_FB_9125:HG3_Ill_250bpfermikitraw_13726:HG3_Ill_150bpfermikitraw_13290:HG4_Ill_manta_2536:HG4_Ill_Krunchall_14677:HG4_Ill_GATKHC_16925:HG4_Ill_GATKHCSBGrefine_7265:HG4_Ill_FB_9141:HG2_Ill_scalpel_9986:HG2_Ill_manta_2984:HG2_Ill_Krunchall_14432:HG2_Ill_GATKHC_16907:HG2_Ill_GATKHCSBGrefine_7132:HG2_Ill_FB_9164:HG2_Ill_250bpfermikitraw_14110:HG2_Ill_150bpfermikitraw_13249:HG2_Ill_breakscan11_4087:HG2_Ill_Krunchall_14431:HG3_Ill_GATKHC_16838:HG3_Ill_GATKHCSBGrefine_7039:HG3_Ill_150bpfermikitraw_13289:HG2_Ill_GATKHC_16906:HG2_Ill_250bpfermikitraw_14109:HG4_Ill_SVrefine2DISCOVARDovetail_7560:HG3_PB_SVrefine2PBcRDovetail_4846;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13249:HG2_Ill_250bpfermikitraw_14110:HG2_Ill_FB_9164:HG2_Ill_GATKHCSBGrefine_7132:HG2_Ill_GATKHC_16907:HG2_Ill_Krunchall_14432:HG2_Ill_manta_2984:HG2_Ill_scalpel_9986:HG4_Ill_FB_9141:HG4_Ill_GATKHCSBGrefine_7265:HG4_Ill_GATKHC_16925:HG4_Ill_Krunchall_14677:HG4_Ill_manta_2536;NumExactMatchSVs=13;ClusterMaxShiftDist=0.169811;ClusterMaxSizeDiff=0.130841;ClusterMaxEditDist=0.317757;PBcalls=7;Illcalls=31;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=52;DistBack=5;DistForward=27;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5083;REFWIDENED=9:99186841-99177049;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5692.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:3:21:1:27:./.:0:0:0:0:0/1:7:45:./.:.:.:.:.:.
chr9	101090311	HG2_PB_SVrefine2PB10Xhap12_7642	T	TGGGATCAATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4089:HG4_PB_HySA_15315:HG3_PB_pbsv_10182:HG3_PB_HySA_15801:HG4_PB_pbsv_10465:HG2_PB_pbsv_10437:HG3_PB_assemblyticsfalcon_27858:HG2_PB_assemblyticsPBcR_27204:HG3_PB_HySA_15800:HG4_PB_SVrefine2PBcRDovetail_5248:HG2_PB_SVrefine2Falcon2Bionano_4946:HG2_10X_SVrefine210Xhap12_7434:HG3_PB_SVrefine2PBcRDovetail_4852:HG2_PB_SVrefine2PB10Xhap12_7642:HG2_PB_SVrefine2Falcon1plusDovetail_12475:HG3_PB_SVrefine2Falcon1Dovetail_6312:HG2_PB_SVrefine2PBcRplusDovetail_11672:HG4_PB_SVrefine2Falcon1Dovetail_6404:HG2_PB_HySA_18966:HG2_PB_PB10Xdip_30686;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7642:HG3_PB_SVrefine2PBcRDovetail_4852;NumExactMatchSVs=2;ClusterMaxShiftDist=0.127273;ClusterMaxSizeDiff=0.127273;ClusterMaxEditDist=0.233333;PBcalls=18;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=329;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=9:101090312-101090325;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5693.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:./.:0:1:0:10:./.:0:0:0:0:1/1:0:11:1/1:3:59:.:.:.
chr9	101339409	HG3_PB_assemblyticsfalcon_27862	C	CATGGATGGATGGATGGATGGATGGATGGTTAGGCGAATGGATGGGTGAACATATGGATGGATGGATAGGTGAATGG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13261:HG3_PB_pbsv_10186:HG2_PB_PB10Xdip_30687:HG2_PB_pbsv_10440:HG3_PB_HySA_15805:HG4_PB_HySA_15317:HG4_PB_HySA_15318:HG4_PB_pbsv_10468:HG4_PB_SVrefine2Falcon1Dovetail_6407:HG2_PB_HySA_18969:HG3_PB_assemblyticsfalcon_27862:HG2_PB_assemblyticsPBcR_27208:HG2_Ill_Krunchall_14443:HG2_Ill_250bpfermikitraw_14122;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13261:HG3_PB_assemblyticsfalcon_27862:HG2_PB_assemblyticsPBcR_27208:HG2_Ill_Krunchall_14443:HG2_Ill_250bpfermikitraw_14122;NumExactMatchSVs=5;ClusterMaxShiftDist=0.274286;ClusterMaxSizeDiff=0.272727;ClusterMaxEditDist=0.346369;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=76;DistBack=193;DistForward=99;DistMin=99;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=101;REFWIDENED=9:101339408-101339511;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5694.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:32:./.:1:35:0:0:./.:0:0:0:0:0/1:4:20:./.:.:.:.:.:.
chr9	103158932	HG4_Ill_GATKHCSBGrefine_7272	G	GTATATATATATATATATGTATATATATATATATATATATATATATATATATATACATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5255:HG3_PB_pbsv_10188:HG3_Ill_GATKHC_16870:HG4_PB_HySA_15329:HG3_Ill_GATKHCSBGrefine_7049:HG4_Ill_GATKHC_16949:HG4_Ill_GATKHCSBGrefine_7272:HG3_PB_HySA_15813:HG2_Ill_GATKHC_16932:HG2_Ill_GATKHCSBGrefine_7141:HG2_Ill_manta_2987:HG2_PB_HySA_18983:HG4_Ill_150bpfermikitraw_13417:HG2_Ill_150bpfermikitraw_13275:HG4_PB_pbsv_10471;NumClusterSVs=15;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_7272:HG4_Ill_GATKHC_16949;NumExactMatchSVs=2;ClusterMaxShiftDist=0.34965;ClusterMaxSizeDiff=0.34965;ClusterMaxEditDist=0.377622;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=0;DistForward=13;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=9:103158890-103158947;PctSeqSimilarity=0.8521;PctSizeSimilarity=0.7436;PctRecOverlap=0.7468;SizeDiff=-20;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=78;MatchId=5695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:54:./.:9:38:18:10:./.:0:0:0:0:0/1:12:22:./.:.:.:.:.:.
chr9	103429962	HG4_Ill_150bpfermikitraw_13421	A	AGATGACCTGTGTGAGGAGAGGAGCTACCCACTGTGGTTCTCCTCTCTGCTGAGAGCTGAGCAGATGTAGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7444:HG2_PB_PB10Xdip_30688:HG4_PB_pbsv_10472:HG4_PB_HySA_15330:HG3_PB_pbsv_10189:HG3_PB_HySA_15814:HG2_PB_HySA_18985:HG4_Ill_svaba_13184:HG4_Ill_Krunchall_14704:HG4_Ill_GATKHC_16953:HG4_Ill_GATKHCSBGrefine_7273:HG4_Ill_250bpfermikitraw_14017:HG4_Ill_150bpfermikitraw_13421:HG3_Ill_svaba_13267:HG3_Ill_Krunchall_14186:HG3_Ill_GATKHC_16872:HG3_Ill_GATKHCSBGrefine_7050:HG3_Ill_250bpfermikitraw_13755:HG3_Ill_150bpfermikitraw_13320:HG2_Ill_svaba_13111:HG2_Ill_manta_2988:HG2_Ill_Krunchall_14460:HG2_Ill_GATKHC_16935:HG2_Ill_GATKHCSBGrefine_7142:HG2_Ill_250bpfermikitraw_14137:HG2_Ill_150bpfermikitraw_13278:HG4_PB_SVrefine2PBcRDovetail_5256:HG4_PB_SVrefine2Falcon1Dovetail_6411:HG4_Ill_SVrefine2DISCOVARDovetail_7575:HG3_PB_SVrefine2PBcRDovetail_4859:HG3_PB_SVrefine2Falcon1Dovetail_6319:HG3_Ill_SVrefine2DISCOVARDovetail_7794:HG2_PB_SVrefine2PBcRplusDovetail_11678:HG2_PB_SVrefine2PB10Xhap12_7648:HG2_PB_SVrefine2Falcon2Bionano_4953:HG2_PB_SVrefine2Falcon1plusDovetail_12481:HG2_Ill_SVrefine2DISCOVARplusDovetail_13686;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13278:HG2_Ill_250bpfermikitraw_14137:HG2_Ill_GATKHCSBGrefine_7142:HG2_Ill_GATKHC_16935:HG2_Ill_Krunchall_14460:HG2_Ill_manta_2988:HG2_Ill_svaba_13111:HG3_Ill_150bpfermikitraw_13320:HG3_Ill_250bpfermikitraw_13755:HG3_Ill_GATKHCSBGrefine_7050:HG3_Ill_GATKHC_16872:HG3_Ill_Krunchall_14186:HG3_Ill_svaba_13267:HG4_Ill_150bpfermikitraw_13421:HG4_Ill_250bpfermikitraw_14017:HG4_Ill_GATKHCSBGrefine_7273:HG4_Ill_GATKHC_16953:HG4_Ill_Krunchall_14704:HG4_Ill_svaba_13184;NumExactMatchSVs=19;ClusterMaxShiftDist=0.109589;ClusterMaxSizeDiff=0.0821918;ClusterMaxEditDist=0.312925;PBcalls=14;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=70;DistBack=7;DistForward=53266;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=235;REFWIDENED=9:103429842-103430076;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:1:18:0:14:./.:0:0:0:0:./.:4:41:./.:.:.:.:.:.
chr9	104121211	HG2_Ill_SVrefine2DISCOVARplusDovetail_13690	T	TAGTCCCACCTACTCAGGAGGCTGAGATGAGAGGGACAGTCACTCAAGCCAAGGAGTTCAAGGCTGCAGGACTGATGATCATACCACTGTACTCCAGTCTGGACAACAGAGCTAGACCCTGTCTCTTAATAAATAAATAATTATTTAAAATAAAGAAATCAAGAAAAACTGTTCAATAAAATATGCTCTATGCTCTTACCTTTAAATATGACTTCATGAGGACAAAATAAAAAATATTTGTAAAACTCTGATTTTTTGGTGACTAGAAGTCAACAAATACCAAAAAATTCCTAAACATAATTATAGTACATATCTAAGTGTTCTTTTGATAGGCCAGTAATGTTTCAAATGAGTATAAAATAAAGACGTTCATAATTTATAAATTATTATATATTTATTATGTGTTTCATTTTAGCAAAATAACTGATTATGTTGTTTATTATAACCTATTTTCACATAATTTCTGTTCTATTGACAGTCATTTCTAAGGAAACATCTTTCTTTCAGTCATAATAGTTGTTAGGGTGTTTCTTAGTCATTTCAATTTGGAGAAATTTCGTTCTGCAGAGGCTATAGAAACTGAATGGTCAAAACATTTTTATAGTAATACTTAAATTCAGAAATAAAACATGAATATATGTATCAAGATAAACTATTGAAAGTTTGTAAATAATAAATTATTATAACTGCAGAAAATATTATAAAATATTTAATTTCGTTATATAAATTTCTATCAATTATATTGTGATTTTCACTTTCCAAGTGATATCAACATCAATACATTTATGCAAAGACGGGACATCACACTTTACACCTATTTATCTAAATACAGATACAGATCTAAGATTAACATAAACTATATGCAAAATGTTCTTTAACTGCCACATGCAAGTATTGCAAATATTACGCTAATCCTGAATACCTCCAGGATCACAAATTCGAACAAAAAGAGAGAAAAAAATACACATTATATTATTGGGAAGAACATTTTGTTACCCAAGAATCTGTTGCATTTGTGCTGTCTGAGGGGAATCAATGGTAATTATTTGGCCTTGTCTTTTGCAGAGAAAATCCAAAGATTAATTATCCTACATCAACACTGATATAGCACAAACCTTCCCAGTACTGGAAAGCTATTTCCTTTTGTTTCATGAACATAAGATAAGCTATGTGGGACCTGAAACTGAGGTGCTAAGTGACATCTCTTGAATGCTAAGTAACAGGGACACCCATGTATTATTTCATAAACTTGTAAGGATGGGGGCAGTGTATGTGATATGTAAGGAGGGTGATTGTCTAAAACAAAAAAACAGGTGCCCTTCACAATTTTTCTGTAAATCTAAAACTATTCTAAAATAAAAAATTATTTAGAAAACATGTTTTTAAATAAAACACATATTATTTGTTTAATTAGTCCTCTATTAATTACTATTGATCTATTGATTGTCACCATTAACTACTCCTATTGTTGTTTTAAATAATAGCATTTATGCACAAAAATGTAAATAATACAGAATACTATACACTTTAAAAGAAATGCTTATTGTATATATTTCATGATAAAATAATAACACATGTGTAACTATTATATATCATATTATTCTGGGTTTTTGGTCTGGTTTCTTTTTCTGAACAGTACTTCAAGGCTAGTGTCAATCCCCTGATTTCACTGATATTTTAAAATAAGACTAATAATTAGCAAGTTGCCTACATGATATATAAGGATGGTGCTCAAGTGAGCCTGTAAATATTTTAAACCTTTGGGAATTAAAACTTCTAAAATGATTGTTTTGAAGTTCAAATTGAGGTAGAAGGCTGGACTCAACACCAGAGGTGGGGCTCTGACACCAGACCAAATTGAGGACTAGCTAAAACAGGGATGAGGCAGAAGCAGTTTTCCATAAGACATGCCTAACAGTGTCCCATGACAGCTTACCATGGCCATGGCAACACCTGGTAGTTGCCGCTCCTTTCCATGGCAATGAACTCATGACCCAAAAGTTGTCAACCTTTTCCTGGCAATTTCTGCATAAACCACCCCTTAATCTACATGTAATTAAAAGTAGGTATAAATATGACTGCAAAAACTGCCCTGAGATGCTACTCTCAGCACACTGCCTATGGGGTAGCCCTGCTCTGCAGGAGCGGTCACAGAACTGTAACACCACCAGAGCTCTAACACTGCTGGAGCTATAATACTGCCACTTAAATAAAGCTATTTTCTTCTACCCCACCACCAGGTTGCCCTTTAATTATTTCCTAGGTGAAGCAAAGAACCCTTGCAGGCTAAGCCCTACTTTGGGGCTCACCCACCCTACATCAAAATGATATGTAAAATATAGATGATAAGAAGAGTAGTATAAATTCTAACATAATAAATTTTCATATGAATTCAGTGTCTTTTCAGAAATACATTGGAATGTTACTTACAGGAGTTGACAATTATTTAGTATATGAAAGAATGTTTATCCTACATATTCAGGCTATTGCAATGGAAGTGAAATATATTTATTGCCTATATGAAAGAAATATATTTATATGGATAGATGCCCAACTGCATGAAGATTTTAGTGAAATTCCTAACTAGGTAATTAAAAATGTACTGAATTTTTTATTTTTTTCTCAGTCTTGTGAAGAAAAGGGAATGATAGTAAATGTTTGTTATTTTATGCTGAAGTTTATTTATTTTCATATCAAAAGTTCTCATTCCTCTATTCAAGTTGCTGAAAGAACTTTAATATTAAATGACTTCATTAGTCTGTGGTAAAGAATAGACAGCTCAATTTTATATTGTTTACGAAAAGGAGAATCTGGCCAGTCATCAGCCAAAGTTAGCAAAAGAAAGGGCAAAGCTTAATTGTCTTAGTATGGACTTCGATAATTGGAAAAGCTGGGAAGATGATTCAGAAGAAGACATGTCTAATTTTGATCATTTCTCTGAGATGATGTGCTGAGACCAGCTTGGTTGTGGAGACCCTAACCCAGCGGCACTAGAGGAATTAAAGACACACACACAGAAATATAGCATGTGGAGTGGGAAATCAAGGGACTCAACAGCCTTCAAAGCTGAGAGCCCCGAACAGAGATTTACCCACATATTTATTGACAGCAAGTCAGTGGTAAGCATTGTTTCTATAGATTATAGATTAACTAAAAGTATTCCTTACAGGAAACAAAGGGATGGGCCAAAACAAAGGGATGGGCTCTGGCTAGTTATCTGCAGCAGGAACATGTCCTTAAGGCACAGATCGCTCATGCTATTGTTTGTGGCTTAGGAACACCTTTAAGCAGTTTTCTGCCCTGGGTGGGCCAGGTGTTCCTTGCCCTCATTCCGGTAAACCCACAACCTTCAGCGTGGGCGTCATGGCCATCACAAACATGTCACAGTGCTGCAGAGATTTTGTTTATGGCCAGTTTTGGGGCCAATTTATGGCCAGATTTGGGGGTCTGTTCCCAACAATGATGAACAACATGGGTGGTGAGGAGGATGTGGATTTACCAGAAATCAATGGAGCAGATGCTGATTTAAAAGACAGTGATGGAAAAAATGCCAGATCTGGAGTAAGGAATATTGTCATCACCTAGATTTTGAAAAAGAAAAGCAACTTCTCTGCAAGATTTCATAATTGACAGAATACCTGAGTTGACAGCTCTGAAGGCAGTTGCTGTATTTGCCTGCTTTAACCCATTTGTCAACTTGTTTGCGTTTTTAAAGGCTTCACTGAGGGTTAATATGTACCATTTGGATGGGGCAATTTGAAGTCAGCTAAGGCAGTAACCTTATGCATGAACATTTCCCAGACTTCTGTGAAGCTGTTGCAGTCCCAGGCAATTGATGCAGCAGTTGTGATAAATAAAACATATCATCTAAGTCTCCTTTTCTTCATAATGTAGATACTGATAGGAAGCTCTCAGCTTATGGAAAGATAACTAAATTTAGGGTATAGAATATGGACTTAAAAGCAGAGGAAGCAAATTGGCTGACACCTTAAATTGATAACCTGCTGTTCTTCTGGTGTATACTTCAGGACTAGTCTACTAACATTTAGTGTTCAAAAACTTCACTTCACACTATTGTATGTAAGTGATCACTTGCCAGTGTGCCAGATCTATCTTAGCTAAAACTAGTAAATGACTTAACTTAGATGGTTTCTGAAACCTGTACATTTGGTATTTTTTGGCCCATAAGCTTTTAATTCTCTTAGCATGGAGGATGAAGGAAGCTGTACATTGTTGCTTGAGAGTCTGCAGCTTTAGACCAGATTTATATTTGCACTGGAAGTATGGCAAGTGAGTGAAAAAAATGTTAGTGCACTTTGGATTTTGAATTTCCTTTTTTTTTAAATTATTCTGCTTGTACCAAGGCTGAAAACCTCAATTTATGTTAGTGACAGTAGAGATTTTTTTTATGTCTACATTCTTTCTAATAAACTGCTGGAAGACTTCTTGGCTGTCCTTTTAAGTGTCTGGCTTACTGTAATTTTATGTATTTACCATTGACTGTAATGTATTTTTATTTGAGGAAGAATTTCGGATTTTTCTGCTGTTTGGAAAAGAAGGCTTGCTGCAATGTCATAGGAAACCTTTTAAAAGTGGATCTGTAATAGAAAATTTTACATGCACTTTGCTGCAACTGGAAAAGAAAGCATTGTGATTTTATTGAAATATAACTAAATGTGTTGTCCTCCTCTAAAAAAGATAATAATAATTCAAGATTTGAACAAAAACTTGAAAGAGGTGATGACATTGTTCATCTCTACAACAGTATTCATGACTTGGACTGGACATGCAAGTTAACATATAATGCAAATTGATCTGCTTATTTGAACAACCTGAATTTATACTTATAAATCAAATTTATATCAGTCAGTGTTCTCCATACAAGACAACATGAGTATGGCCATTGTAAAGCTAGCAAGGTGAACGAACACCTTAATCATAATATATTTGATTTATTTGATTCTTTTTATCTTTTGAATTACCAAATTTCATCAGAAGTTTCTGAAAACAATCAATTGTGAAGAGTCATTTGAAAGAGTTGAAAAAAATCAAAGATAATTATAGGAATTTTCCTGACTTTTAGCTCTAATAGGAATATTGCGGCAGCTTAGTTTTAAATTACCCCACTCTTCCTAAAAACCAATCAGAGTTACAAAAAAAGGCACACTTTCGGTGAAACAAGAAGACAGATAAATCTAACAAATTACAAATATTCACTCCCAGAAAGAGACAACACTATGAGAAGAGGAAGCATCTGTGAGGAAATCAATCTCCAGGTGAGGCAGAAAGAGAACTGTCAGAAATAGAGAGTGGGACCCATAAGTGGCAGAACTCAGTAAGCCATTATGGTGGACACACTGATGCTGCACTGAGATCCTCCTTCAGAAATCAAGGATTTGTAATCCAGCTGTTGAAAGCACTGCTGGGAAACAGCACTCAGCTGTCAGCCATCTTCAAGGATTACCTTAGCTGAATAAAGCCGCCTAAGGTATGCCCCAACACAATGGCTATTATCAAAAAAGAAAAACAAAAAGAAAAAAGAAAAAAACAAGTGTTGATGAGAACGCAGAGAAATTGGAACCCTTGTGTATTGCTGTTGGAAATGTAAAATGGTGGAGCCATTATGAAAAACAGTATGATGGTCCATCAAAAAATCAAACATAGAATTACCATGTGATCTAATAATTCCACTTTGGGTATATATCCAAAAGTATTGAAAAGCAGGGCTTAAACACATCTTTATATACCAATGTTCATAGCAGCATTATTCAAAATAGTCAAAAGGTAGAAAAAACCCCAATGTCCACCAACAGATGAATGACTAAATAAAATGATGAGTAAATACACATACAATGGAATATTATTCAGCTGTAAAAAAGAAAATTCTGACACATGCTACAAAATAGATAAACTTTGAAGACATTACATTAAGTGAAATAAGCCAGACACAAAAGGGCAAATAAGGATTCTACTTATATGAGAAACATAGAATAGTTAAATTCACAAAAACAGAAAATAAAAAGGTGTTTCCAGGAACTAGGGTAAGGGGAAAATGTTATTGTTTAATGGATATAAAGTTTTAGTTTGGAAAGATGAAAAAATCCTGGAGATAGACAGTTGTAATGATAGCATATCATTGTGAATGTTCTTAATGCCACTATACAGCATATATATTATAGAACTAAAAATTTTATGCCTGTTTTTTGTTGTATCTATTTTATCACAATAAAAAAGTCAGTATCTTTTACAAAGTTTTGTTCATAGTTTTTAATTAAGCAAAAATTTATCTAGATTCCTTTTTTGCTTAAATTTTTTTATTTTTATTTTAGATTCAAGGGTAAGTGTGCAAGTTTGTTATACAGGTAAACTCATATGACAGGGATTTATTGTACAGATTATTTTGTCACCCTTGTACTAAGCATAGTACCCAATAGCTACTTTTCCTGTTCCTCTCTTTCCTGCCACCCTCCACCCTCAAATAGGCCCCAGTGTCTGTTGCTCCCCCCTTTGTGTCCATGTGTTCTCATCATTTAGCTCCCACATATAAGGGAAAACCTGCAGTATTTGGCTTTCTGTTCCTATGTTAGTTTCTTCCAACTCCATCCATGTTCCTGCAAAGAACACGATCTTGTTCTTTTTTTGTGGCTGCTTAGTATTCCATCGTGTATATGTACCACATTTTCTTTATTCAGTCTATCATTGGTGGGCATTTAGGATGATTCCATGTCTTTGCTATTGTGAATAGTGTTGCAGTGAGCATATGCATGCATGTGTCTTTATGATAGAACAATTTCTATTCCTTTGGGAATGGAATCCTAGTAATGGGATTGCTGGGTCAAATGGTAGTTGTATTTTTAGCTCTTTGAGGAATTGCCACACTGCTTTCCACAATGGTTGAATTTTATACTCCCACCAACAGTGTATAAGCATTCCTTTTGCTCTGCAACCTCACCAGCATCTGTTATTTTTTGACTTTTTAATAGTAGCCATTCTGACTGATGTAAGATGGTATCTCATTGTGTTTCTGATTTGCATTTCTCTAATGATCAGTGATGTTGAACTTCTTTTTATATGCTTGTTGGGCATATGTATGGCTTCTCTTGAAAAGTGTCAGGTCATGTCCTTTTCTATTTTAACTCTGGCAACATTAGTGTGCCAGATTAAGGGCTTTTTTTTTTTTTAAAGATTTTATCATGTAATTTAATTTTAAATATTTTTTTTTTATTTTCCTGGTATGTGAAAGGCTAAAAAATATAAAGAACTGGTTTGGACTGGAAATATCCTCTATAATATAGAAAAAATGTATTTTACTAGACATCAATAAAAATCCAGGTTGTCTTTTAAAAAATTACCAGGAATAATTACATCTCCAGGATCATACTACTAAACTTTCTAAAAAGGAGGTAATTTTTATTGTAATTAAACTATTATATTAAAAAAGAAATTTTTAAGATTCTGTTTATGAAAGAAGTACATTGGTATAATATCTAACCCAAAAATATCATGAAAAAGGAAACAACAGTTTAATCCCATTTATTAATGTTAATTAAGAATACATCATGACCAAATGAGTTTCATTTCTCAAATGCAAAGATGACTAAATACTAAAAAATAACTTATTCCATTTAGATATCCAGAGAAAAACCATAGAATTATTTCTGATGATGCTAAAAAGGCACTTGAAAAACAATTCAAAAAATTCTTAGTTTAAAATATTTTTCATAGACTATACATCAAAGGATATACATGAAGCCAAACACCAACATCATACTATATAGGCAAAAACATTCCTCCTAAAGTCCCAAACAGGAAATAAGAAAATTACACCCATTATGACAACTATTATATAACTTTGGACTGGAGGTGTTAGCCATTACATGATTATTACTCATATAGTCAAAGGAGATGTTCCTATTGACTGGGTCTATGAAATATGACCACTTCTATAACTGAAAGAGGAGGGAGGCTATTAGTCTCACTCAACAAAATGGAATGATTTTACTCTAAACAGAGGGAGTATCAGAAAGCAGATAGAAGGAAAAGAGTTTAGGCACATACAACCAAAGTGTCCTCAATTTACTTCCACTACTCTAATTCTTCACTGGCTCCCCACCTACCTACAAAACGATTCAAAATATATTTCTTGTCATCCATCTTCACCTTGATTATCCACCAATCACCTTCCACTTCCATACATTGCAATTTAGTAGCTCAGAAATATCTGGGCTATGACTTGCCCCTTAGAGAAAACCCCTCAGAGTTGACCTTGGACAAGGTTATTTGGATTGCACTATGCCCAGGACCATAAAATTATGTCCTGCAAGCCAAATAACCTACAGCCTATTTTTTGTACTGCTTGTGGGTTAAGAATGGCTTTTACATTTGTAAATACTTGGAGAAAAAATAAAAAGAAAATATTATTTTGTGATGCAAAGACTATATGCAAATTTTAGTGTCCATAAATCAAGTTTAATTGAAACACAGACAGTCATTCATTATTCATTACACACTGTCCATAGGTGTTGCTGTGCTATCATGGCAGAGCTGAGTAATAGTGACAGCGACCTTATGACTTGCAATACTGAAAATATTTGCTATCTAATACTTTACAGAAAGAGTTTGCCAGCTCCTAATCTAGAGACACACAATCCCCTCATCATGGCTGTGTCCTCAAGTTGCAATTCTGTGAATTTCATATGGTTCCTTTCCCATAGCTGAGAATGCCAAAATGTTGGACATTTTTAAGCACAAAAATAAGTTTATTTAATTTTATTAGATTTTGCTGAATTATTGATCGTAGACCCATTCTATGATCTTATATCCATATCAACTTCCATATTGCCTTAAACTAATAGATTATTTTCCCAGATCTAGTTTTCCAATAATAATTGCATTACTATTTTAAAATATCAGAGATCTAAGCATATTTAATTTGAGTTTCAGGACATCAACAAACATCAACCTCTGATTCATTTCATGTCTCTTTTATAAGCCAAGGCATTCTGTAGTTTATCAGTGGTAGTCTTTTTTCCCTTATGTATTGCTATGATTGCAAACTGGAATATTTTAGGTCAGGTAGAACTCTAAGTTTATTTCTACAAATATGGGACTCTCAGCGTATGATATTGGGTTAAGTAGAAACCATTTTTCCCTTTTAAAATTAAGGCGACCATTCTCAGTCCTCTTGCTGTTCTCTTGCTGTGACTTCCTTCTTACAGTAAAAGATCGAAGACATTCCTCTGTGAAGGGCAGGAGTGTAGGAGCTGGTGAAGGAGAGACTGTCCAGAACCTCCCGCTCATGCAGTCCAAGTCTCTAGTGCAGAAGCTGCAGTGCTCCTCAAAGACCTTGTAGCTCAAGGACTTTCCCTAGCTGCAATATTCCAAGGATACTGGGCTTATATCTTGAGGTTGGTGCCAAATGACCCCATGGATGACGGAGGTCTGAACCTTCCCCAAGTGGGACATGATGAGCTTTCTTGGGAGACCGACAACAACAAAAACACCCTTCTCCTGTGGTACCGCATCTCTGTTGAGGACAGACTCCATGGAGATAATGCCAAGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30689:HG3_PB_assemblyticsfalcon_27881:HG3_PB_SVrefine2Falcon1Dovetail_6321:HG2_PB_SVrefine2Falcon1plusDovetail_12482:HG3_PB_SVrefine2PBcRDovetail_4860:HG2_PB_SVrefine2PBcRplusDovetail_11679:HG2_PB_SVrefine2PB10Xhap12_7649:HG2_Ill_SVrefine2DISCOVARplusDovetail_13690:HG2_10X_SVrefine210Xhap12_7447;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7447:HG2_Ill_SVrefine2DISCOVARplusDovetail_13690:HG2_PB_SVrefine2PB10Xhap12_7649:HG2_PB_SVrefine2PBcRplusDovetail_11679:HG3_PB_SVrefine2PBcRDovetail_4860;NumExactMatchSVs=5;ClusterMaxShiftDist=0.00408698;ClusterMaxSizeDiff=0.00408698;ClusterMaxEditDist=0.0122841;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=9561;DistBack=16402;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=9:104121212-104121215;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5697.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:37:0|1:42:1:0:29:./.:0:0:0:0:0/1:29:22:0/1:201:321:.:68169:.
chr9	105073653	HG2_PB_SVrefine2PB10Xhap12_7656	T	TAGATTTTATTCATCATCTTGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGTGATATCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAACCAGCTCCTGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGTAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTTTATCTAGAAACCCCATGGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCCTGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCTCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCACATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGATGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAATTAACAGATCTCTCCACAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_30695:HG3_PB_pbsv_10198:HG2_PB_assemblyticsfalcon_27988:HG2_PB_assemblyticsPBcR_27237:HG2_PB_SVrefine2Falcon1plusDovetail_12488:HG3_PB_SVrefine2PBcRDovetail_4865:HG2_PB_SVrefine2Falcon2Bionano_4960:HG2_PB_SVrefine2PBcRplusDovetail_11685:HG2_PB_SVrefine2PB10Xhap12_7656:HG3_PB_HySA_15819:HG2_PB_HySA_18996;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7656;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0582867;ClusterMaxSizeDiff=0.0582867;ClusterMaxEditDist=0.108625;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=3332;DistBack=16366;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=9:105073654-105073669;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9973;PctRecOverlap=0.9976;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5698.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:39:0|1:37:0:0:31:./.:0:0:0:0:0/1:27:4:0/1:122:360:.:3474:.
chr9	105450604	HG2_PB_PB10Xdip_30699	T	TAAAAAACAAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCGTCTCTACTAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCGCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12490:HG2_PB_assemblyticsfalcon_27992:HG2_PB_assemblyticsPBcR_27241:HG2_PB_HySA_19003:HG2_PB_PB10Xdip_30699:HG2_PB_SVrefine2PB10Xhap12_7658:HG2_PB_SVrefine2PBcRplusDovetail_11687:HG2_PB_SVrefine2Falcon2Bionano_4962:HG3_PB_pbsv_10201:HG2_PB_pbsv_10453;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_30699;NumExactMatchSVs=1;ClusterMaxShiftDist=0.132686;ClusterMaxSizeDiff=0.132686;ClusterMaxEditDist=0.168285;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=306;DistBack=1311;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=9:105450605-105450619;PctSeqSimilarity=0.9887;PctSizeSimilarity=0.9839;PctRecOverlap=0.9871;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5699.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:32:./.:14:7:3:21:./.:0:0:0:0:0/1:22:11:0/1:16:23:.:.:.
chr9	105594218	HG2_PB_SVrefine2PBcRplusDovetail_11689	T	TATATATATGTATATCATATATATGTATATCATATATATGTATATCATATATATGTATATCATATATATGTATATCATATATATGTATATCATATATATGTATATCATATATATGTATATCATATATATGTATATCATATATATGTATATC	20	PASS	ClusterIDs=HG3_PB_pbsv_10204:HG3_PB_HySA_15827:HG2_10X_SVrefine210Xhap12_7457:HG3_PB_SVrefine2PBcRDovetail_4867:HG4_Ill_manta_2542:HG2_Ill_manta_2993:HG3_PB_SVrefine2Falcon1Dovetail_6328:HG4_PB_pbsv_10485:HG2_PB_HySA_19006:HG4_Ill_GATKHC_16979:HG2_Ill_GATKHC_16959:HG2_PB_SVrefine2PBcRplusDovetail_11689:HG2_PB_SVrefine2PB10Xhap12_7660:HG2_PB_PB10Xdip_30702:HG4_Ill_SVrefine2DISCOVARDovetail_7587:HG2_PB_SVrefine2Falcon2Bionano_4964:HG2_PB_SVrefine2Falcon1plusDovetail_12491:HG2_PB_pbsv_10455;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7660:HG2_PB_SVrefine2PBcRplusDovetail_11689:HG3_PB_SVrefine2Falcon1Dovetail_6328;NumExactMatchSVs=3;ClusterMaxShiftDist=0.254902;ClusterMaxSizeDiff=0.248366;ClusterMaxEditDist=0.28479;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=150;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=109;REFWIDENED=9:105594219-105594327;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5700.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:3:33:2:28:./.:0:0:0:0:1/1:1:50:./.:.:.:.:.:.
chr9	106076453	HG4_Ill_GATKHCSBGrefine_7290	T	TAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_Ill_GATKHCSBGrefine_7290:HG2_PB_pbsv_10458:HG4_PB_pbsv_10489:HG2_PB_HySA_19014:HG4_Ill_MetaSV_5660;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_7290:HG4_Ill_MetaSV_5660;NumExactMatchSVs=2;ClusterMaxShiftDist=0.117949;ClusterMaxSizeDiff=0.112821;ClusterMaxEditDist=0.195489;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=183;DistBack=69361;DistForward=4309;DistMin=4309;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=176;REFWIDENED=9:106076454-106076629;PctSeqSimilarity=0.9634;PctSizeSimilarity=0.9289;PctRecOverlap=0.9289;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=5701.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:0|1:38:1:1:27:./.:0:0:0:0:0/1:30:14:./.:.:.:.:.:.
chr9	107606587	HG2_PB_SVrefine2Falcon2Bionano_4971	T	TAAAAAAGGTTACCAGGCCGCGCCGGCGAGCGCCGCCGGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGCGGGGCCCGAGGGCAAGGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGCGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTTTCTGCCGGCTGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGTCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCGGCCAGCCGTGCCATCCGGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCATCCCCCCACCCGGCCAGCCGCCCCGTCCGGTAGGGAGGTAGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCTCTGCCCGGCCAGCCGCCCCGTCCGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGATCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGGGTCAGCCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGGTCGGCCCCCTCCCGGCCAGCCGCCCGTCCGGGAGGGAGGTGGGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCCACCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAAAGAATGGACTTTCCCAGGCCAGCTGTGGTGGCTCACGACTGTAATCCCAGCACTGTGGCAGGCCAAGGCGGGCAGATCACCTGAGATCAGGAGTTCAAGACCAGCCTGACCAACACGGAGAAACCCCGTCTCTACTAAAAATAAAAAAAATTAGCTGGGCGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGTTGTGAGCTGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAGAGGGAAACTCCATCAAAAAAAAAAAAAAAAAAAAGGACTTTCTCAAAGAAAATGTATTTAAATGTCTGCACCAATAATTCCAGCATGTGTATGAATAAATATGATATGTCCTTTACAGTGAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_HySA_15373:HG2_PB_pbsv_10468:HG4_PB_pbsv_10496:HG2_PB_assemblyticsPBcR_27258:HG2_PB_PB10Xdip_30713:HG2_PB_SVrefine2Falcon2Bionano_4971:HG2_PB_SVrefine2PBcRplusDovetail_11695:HG4_PB_SVrefine2Falcon1Dovetail_6427:HG2_PB_SVrefine2Falcon1plusDovetail_12498;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4971;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0784254;ClusterMaxSizeDiff=0.0766086;ClusterMaxEditDist=0.182701;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=3248;DistBack=9458;DistForward=18106;DistMin=9458;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=9:107606588-107606602;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9948;PctRecOverlap=0.9951;SizeDiff=-17;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:49:./.:18:10:2:20:./.:0:0:0:0:0/1:18:9:0/1:106:226:.:2524:.
chr9	107849924	HG2_PB_SVrefine2Falcon1plusDovetail_12501	GGCG	CCAGCTCCTGGATTCATTGATTTTTTTGAAGGGTTTTTTGTGTCTCCATTTCCTTCAGTTCTGCTCTGATCTTAGTTATTTCTTGTCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTCTCTAGTTCTTTTAATTTTGATGTTAGGGTGCCAATTTTAGATCTTTCTTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACCACTGCTTTAAATGTGTCCCAGAGATTCTTGTATGTTGTGTCTTTGTTCTCATTGGTTTTAAAGGACATCTTTATTTCTGCCTTCATTTGGTTATTTATGCAGTAGTCATTGAGGAGAGTTTGTTCAGTTTCCACGTAGTTGAGTGGTTTTGAGTGAGTTTATCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGACAGTTTATTGTGATTTCTTCTGTTCTTTTACATTTGCTGAGGAGTGCTTTACTTCCAACTATGTGGTCAGTTTTGGAATAAGTGTGATGTGGTGCTGAGAGGAATGTATATTCTGTTGATTTAGGGTGGAGAGTTCTGTAGATGTTATTAGGTCCGCTTGGTGCAGAGCTGAGTTCAAGTCCTAAATATCCTTGTTAACCTTCTGTCTCACTGATCTGTCTAATATTGACAGTGGGGTGTTAAAGTCTCCCATTATTATTGTGTGGGAGTCTAAGTCTCTTTGTAGGTCTCTAAGAAACTTGCTTTATGAATCTTGGTGCTCCTGTATTGGGTGCATATATATTTAGGATAAGTAGCTCTTCTTGTTGAATTGATCCCTTGACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATTTTGTTGGTAAAGTGTGTTTTATCAGAGACTAGGATTGCAACCCCTGCTTTTTTTTGCTTTCCATTTGCTTATAGATCTTCTCCATCTATTTTGAGACTATGTGTGTCTCTGCATGTGAGATGGGTCTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTAGCCCATTTACATTTAAGGTTAATATTGTTATGTGTGATATTTCATCGTGTCATTATAATGTTAGCTGGTTATTTTGTTGTTAGTTGATGCAGTTTCTTCATAGCATCGATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGATCTCTGTAAGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGATTTTATTTCTCCTCACTTATGAAGCTTAGTTGGCTGGATATGAATTCTGGCTTGAAAATTCTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTCTGGCTTGCAGAGTTTCTGCCAAGAGATCTGCTGTTAATCTGATGGGCTTCCCTTTGTGGGTAACCTGACCTTTCTCTCTGGTTGCCCTTAATACTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGTGTCTCAGGTTGCTCTTCTCGAGGAGTATCTTTGTGCTATTCTCTGTGTTTCCTGAATTTGAATGTTGGCCTGCCTTGCTAGGTTGGGAAAGTTCTCCTGGATAATATCCTGAAGAGTGTTTTCCAACTTGGTTCCATTCTCCCTGTCACTTTCAGGTACACCAATCCACATAGATTTGGTTTCTTCACATAGTCTCATATTTCTTGGAGGCTTTGTTCATCTCTTTTTACTCTTTTTTCTCTAACCTTCTCACTTTATTTCATTAATTTGATCTTCAATCACTGACACCCTTTCTTCCACTTGATGGAATCAGCTATTTAAGCTTGTGCATGCATCACGAAGTTCTCGTGCCATGGTTTTCAGCTCCATCAGGTCATTTAAGGTCTTCTCTACACTGTTTATTCTAGTTAGCCATTCATCTAATCTTTTTTCAAGGTTTTTAGCTTTCTTTGCGATGGGTTTTGAACATCCTTCTGTAGCTTGGAGAAGTTTGTTATTACCACCTTCTGAAGCCTACTTCTGTCAACTTGTCAAAGTCATTCTCCATCCAGCTTTGTTCCGTTGCTTGTGAGGAGCTGTGATCCTTTGGAGGAGAAGAGGCATTCTGGTTTTAGAATTTTCAGCTTTTCTGCTCTGGTTTCTCCCCATCTTTGTGGTTTTATCTATGTTTGGTCTTTGATGTTGTGACCTACAGATAGGATTTTTGGTGTGGATGTCCTTTTTGTTGATGTTGACACTATTCCTTTCTGTTTGTTAGTTTTCCTTCTAACTGTCTGGTCCTCAGTTGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCTGTTTGCCTGGGTATCACCAGCGGAAGCTGCAGAACAGCAAATATTGCTGCCTGATCCTTCCTCTGGAAGCTTTGTCCCAGAGGGGCACCCACCTGTATGAGGTGTCTCCCAGTTGGCTATACATGGGGTCAGGGACCCACTTGAGGAGGTAGTCTGTCCGTTCTCAGAGCTCAAACACCATGCTGGGAGAACCACTGCTCTCTTCAGAGCTGTCAGACAGGGATGTTTAAGTATGCAGAAGTTTCTGCTGCTTTTGTTCAGTTATGCCCTGCCCCAGAGGTGGAGTTTATAGAGAGCAGGCCTTGTTGAGCTGCGTGGCTCCGCAGTTCGAGCTTCCTGGCCACTTTTGTTTGCCTATTCAAGCCTCAGCAATGGTGGACACTACTCCCCCGCCAGGCTGCTGCCTTGCAGGTCAATCTCAGACTGCTGTGCTAGCAGTGAGCAAGGCTCCGTGGGCATGGGACTGCCGAGCCAGGTGGGGATATAATCTCCTGGTCTGCCATTTGCTAAGACCACTGGAAAAGTGCGTATTTGGGTGGAAGTGTCCGTTTTTCCAGGTACGGTTTGTCATGGCTTCCCTTGGCTAGGAAGAGAAATCTTCCAACCCCTTGCACTTCCAGGTGAGGCGACACCACCTGCTTCGGCTACCCTCTGTGGGCTGCACCACTGTCCAACCAGTCCCATGAGATGAACCAGGTACCTCAGTTAGAAATGCAGAAATCAGCCGGGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAATCTCGTCTCTACTAAAAAATACAAAAAAATAATTAGCCGGGCATGGTGGGGTGCCTGTAGTCCCTACTCGGGAGGCTGAGGCAGGAGAATGGTGGGAACCCGGGAGGCAGAGCTTGCAGTGAGTCGAGATCACGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCGTCTCAAAAAAAAATGCAGAAATCACCTGTCTTCTGTGTCGATCATGCTGGAGCTGCAACCAAAGCTGTTCCTATTCGGCCATCTTGGAACAGATCAACTAACAATAGAATTATTTAAATTGGCCGGCATGGTGGCTCATGCTATATTCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTTGAGTCCAGCCTGATCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAATTAGCTGGTGTGGTGGCACACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGCCTGGGCACAAGAGCGAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGAATATATTTAAATCTACCGTGACCTGGAAGTTCCCCCTTCAAGTTGTCCCCCGTTTCCAGTTCAAACCAATCTAAATCTAACATGTATCAATTGATGTATTATGTCTCCCTAAAATGTATAAAAGCAAGCTGTCTGTGACCACATGGGTACGTGTTGTCATGACCTTCTGAGGCTGTCACAGGTACATCCTTCACCTTGGCAAAATAAACTTTCTATATTTATTGAGGCTTGTTTCAGATACTTTTTGGTTTACAACAGCCACACTTTAGCAGAATTTAGGCTCTTCATCCTCCTAACCTAGTGGTCTTTCATTAACTTTACAAACGTGGTTTAGTTTGGGGGAAAGACTATTATCATTTAAACTATAAACTAAATGTCTCCGAAAGTTAGCATGACCTAAGCCCAGGAATGATTAAGGGCAGTTTGGAGTTAAAAGCAAGATGGGGTTGGTCAGACAGATCTCTTTCACTGTCATAATTTCTAACTGTTACTATTTTTGCAAAGGTGGTTTCAGTAATTCTTGCCTTACAAGGCTATGTGAAGATTACATAAAATAATACATTTGGGGGTGGGTGTGGTGGCTCACACTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGGAGATCAAGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30714:HG2_PB_pbsv_10475:HG2_PB_HySA_19040:HG4_PB_SVrefine2PBcRDovetail_5272:HG2_PB_SVrefine2Falcon2Bionano_4974:HG2_PB_assemblyticsfalcon_28009:HG2_PB_SVrefine2Falcon1plusDovetail_12501:HG2_Ill_SVrefine2DISCOVARplusDovetail_13716:HG2_10X_SVrefine210Xhap12_7468:HG4_PB_SVrefine2Falcon1Dovetail_6431:HG3_PB_assemblyticsfalcon_27922:HG3_PB_SVrefine2Falcon1Dovetail_6338:HG2_PB_PB10Xdip_30715;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12501:HG2_PB_assemblyticsfalcon_28009;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0528294;ClusterMaxSizeDiff=0.0523873;ClusterMaxEditDist=0.112732;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=4404;DistBack=-3;DistForward=260;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=9:107849928-107849923;PctSeqSimilarity=0.9906;PctSizeSimilarity=0.9877;PctRecOverlap=0.9886;SizeDiff=-55;StartDistance=-2;EndDistance=1;GTMatch=0;TruScore=98;MatchId=5705.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:38:1/1:3:12:0:15:./.:0:0:0:0:./.:0:4:1/1:0:624:.:4580:.
chr9	109142588	HG2_Ill_MetaSV_5428	A	ATATATATATACACATATATATATATATATATACACACATATATATATATATATATACACATATATATATATATACACACATATATATATATACACATATATATATATGTATATGTATATGTATATGTGTGTATATATATATATATATGTATATGTATATATATATATATATATATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4976:HG2_PB_HySA_19047:HG2_Ill_MetaSV_5428:HG2_PB_pbsv_10479;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_MetaSV_5428;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0278552;ClusterMaxSizeDiff=0.0278552;ClusterMaxEditDist=0.111111;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=176;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=9:109142564-109142615;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5706.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:1|0:6:23:27:1:./.:0:0:0:0:0/1:19:14:./.:.:.:.:.:.
chr9	109235270	HG2_PB_pbsv_10481	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGGTCTCGCTCTGTCCGCCCAGGTCGGACTGCGGACTGCCAGTGGCGCAATCTCGGCTCAACTGCAAGCTCCGCTTCCCGGTTCACGCATCTCTGCCTCAAGCCCTCCCGAGTATGGCTGGACTAACAGGCGCCCGCGCACCGCGCCCCGGCTAATTTTTTTTGTATTTTAGTAGAGACGGGGTTGCACGCTTGTTAGCCAGGATGGTCTCGATCTCCCTGACCATGATCCACCTACCGCCTCGGCCTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCAGCCGGCCCTGTTTTCCTGAC	20	PASS	ClusterIDs=HG2_PB_HySA_19050:HG3_PB_pbsv_10224:HG2_PB_pbsv_10481:HG2_PB_assemblyticsfalcon_28016:HG3_PB_HySA_15862:HG2_PB_HySA_19051:HG2_PB_SVrefine2Falcon1plusDovetail_12505:HG3_PB_assemblyticsfalcon_27932:HG2_PB_SVrefine2Falcon2Bionano_4978:HG3_PB_SVrefine2Falcon1Dovetail_6343:HG3_Ill_MetaSV_5608:HG4_PB_SVrefine2Falcon1Dovetail_6435:HG3_PB_SVrefine2PBcRDovetail_4877:HG2_PB_SVrefine2PB10Xhap12_7676;NumClusterSVs=14;ExactMatchIDs=HG2_PB_pbsv_10481;NumExactMatchSVs=1;ClusterMaxShiftDist=0.158385;ClusterMaxSizeDiff=0.15528;ClusterMaxEditDist=0.210046;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=346;DistBack=9;DistForward=85008;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=9:109235261-109235274;PctSeqSimilarity=0.9444;PctSizeSimilarity=0.9538;PctRecOverlap=0.9424;SizeDiff=16;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=94;MatchId=5707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:40:./.:8:22:8:16:./.:0:0:0:0:0/1:18:7:0/1:5:12:.:.:.
chr9	109841837	HG2_PB_SVrefine2PB10Xhap12_7678	A	AGGAAAGAGAGGGGAGGGGAAGGGGAGGGAAGGGGAGGGAAAAGGGAGAGGGAAGGGGAGGGGGAAGGGAAGGGGAAGGAAGGGGAGGGGAAGGAAGGGGAGGGGAAGGAAGGGAGGGGAGGGGAAGGGAAGGAAGGGGAGGGAGGGGAGAGGAAAGGGAGAGGGAAGAGGGGGGAAGGGAGGGGAGGGGAGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12507:HG4_PB_SVrefine2PBcRDovetail_5277:HG2_PB_pbsv_10482:HG2_Ill_breakscan11_4091:HG4_PB_pbsv_10514:HG2_PB_PB10Xdip_30726:HG4_PB_HySA_15388:HG2_PB_HySA_19054:HG2_PB_SVrefine2PBcRplusDovetail_11700:HG2_PB_SVrefine2PB10Xhap12_7678:HG2_PB_SVrefine2Falcon2Bionano_4979:HG2_10X_SVrefine210Xhap12_7474:HG3_PB_SVrefine2PBcRDovetail_4879:HG4_PB_SVrefine2Falcon1Dovetail_6437:HG3_PB_SVrefine2Falcon1Dovetail_6345;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7474:HG2_PB_SVrefine2Falcon2Bionano_4979:HG2_PB_SVrefine2PB10Xhap12_7678:HG2_PB_SVrefine2PBcRplusDovetail_11700:HG4_PB_SVrefine2PBcRDovetail_5277;NumExactMatchSVs=5;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.137566;ClusterMaxEditDist=0.285714;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=192;DistBack=-199;DistForward=67;DistMin=-199;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=191;REFWIDENED=9:109841838-109842028;PctSeqSimilarity=0.9574;PctSizeSimilarity=0.9796;PctRecOverlap=0.4315;SizeDiff=-4;StartDistance=-110;EndDistance=-110;GTMatch=0;TruScore=78;MatchId=5709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:0:14:0:15:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr9	111009774	HG2_PB_SVrefine2Falcon2Bionano_4983	C	CACACCATCCCAACCCACTGCCCACACATCATCCCAACCCACTGCACACACACTATCCCAACCCACTGCACACACACCATCCCAACCCACTGCCCACACATCATCCCAACCCACTGCACACACACTATCCCAACCCACTGCACACACCACTCCAACACACTGCACACACACCATCCCAACACGCTGCACAACCACCCCAACACAGTGCACACACACCATCCCAACACGCTGCACACACACCACCCCAACACACTACATACACACCATCCCAACACACTACATAACACCATCCCAACACACTGCATATATACCACCCCAACCCACTGCACACACACCATCACAACACACTGCACACATACCATCCCAACACACTACACACACACCACCCCAACACACTACATA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5283:HG3_PB_SVrefine2Falcon1Dovetail_6350:HG4_PB_HySA_15395:HG4_PB_pbsv_10520:HG2_PB_pbsv_10487:HG2_PB_HySA_19065:HG2_PB_PB10Xdip_30728:HG3_PB_pbsv_10230:HG3_PB_HySA_15876:HG2_PB_SVrefine2PBcRplusDovetail_11704:HG2_PB_SVrefine2PB10Xhap12_7682:HG2_PB_SVrefine2Falcon2Bionano_4983:HG2_PB_SVrefine2Falcon1plusDovetail_12511:HG4_PB_SVrefine2Falcon1Dovetail_6441:HG3_PB_SVrefine2PBcRDovetail_4883;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12511:HG2_PB_SVrefine2Falcon2Bionano_4983:HG2_PB_SVrefine2PB10Xhap12_7682:HG2_PB_SVrefine2PBcRplusDovetail_11704;NumExactMatchSVs=4;ClusterMaxShiftDist=0.17715;ClusterMaxSizeDiff=0.17715;ClusterMaxEditDist=0.290116;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=401;DistBack=49514;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=858;REFWIDENED=9:111009775-111010632;PctSeqSimilarity=0.9632;PctSizeSimilarity=1;PctRecOverlap=0.0399;SizeDiff=0;StartDistance=-385;EndDistance=-385;GTMatch=0;TruScore=66;MatchId=5710.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:51:1/1:1:24:0:28:./.:0:0:0:0:./.:0:0:./.:2:5:.:.:.
chr9	111217367	HG2_Ill_SVrefine2DISCOVARplusDovetail_13731	T	TTCTTATATATCTTATATACATAAGATATATATATCTTATATATATCTTATATCTTATATATATATGAGATATATATCTTATATAGATAAGATATATATATAAGATATATATCTTATATATATATAAGATATATATCTCATATATATAAGATATATATATCTCATATATATCTTATATATCTCATATATATAAGATATATATATCTCATATATATCTTATATATATCATATATA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7480:HG4_Ill_manta_2555:HG3_PB_SVrefine2PBcRDovetail_4884:HG3_PB_pbsv_10232:HG2_Ill_manta_3005:HG2_PB_pbsv_10489:HG2_Ill_breakscan11_4092:HG4_PB_pbsv_10522:HG3_Ill_SVrefine2DISCOVARDovetail_7835:HG3_PB_SVrefine2Falcon1Dovetail_6351:HG2_PB_SVrefine2Falcon2Bionano_4984:HG2_PB_SVrefine2PB10Xhap12_7683:HG2_PB_SVrefine2PBcRplusDovetail_11705:HG4_PB_SVrefine2PBcRDovetail_5284:HG4_PB_SVrefine2Falcon1Dovetail_6442:HG4_Ill_SVrefine2DISCOVARDovetail_7616:HG2_PB_SVrefine2Falcon1plusDovetail_12512:HG2_Ill_SVrefine2DISCOVARplusDovetail_13731;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13731:HG2_PB_SVrefine2Falcon1plusDovetail_12512:HG4_Ill_SVrefine2DISCOVARDovetail_7616:HG4_PB_SVrefine2Falcon1Dovetail_6442:HG4_PB_SVrefine2PBcRDovetail_5284;NumExactMatchSVs=5;ClusterMaxShiftDist=0.30735;ClusterMaxSizeDiff=0.30735;ClusterMaxEditDist=0.330357;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=233;DistBack=79266;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=288;REFWIDENED=9:111217368-111217655;PctSeqSimilarity=0.9407;PctSizeSimilarity=0.9209;PctRecOverlap=0.6917;SizeDiff=-20;StartDistance=-68;EndDistance=-68;GTMatch=1;TruScore=85;MatchId=5711.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:73:1/1:1:30:4:31:./.:0:0:0:0:./.:1:16:./.:.:.:.:.:.
chr9	112261394	HG2_PB_SVrefine2Falcon1plusDovetail_12514	TC	GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGGGCCGAGGCGGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAATTCTGT	20	PASS	ClusterIDs=HG4_PB_pbsv_10524:HG2_PB_HySA_19072:HG2_PB_assemblyticsfalcon_28040:HG2_PB_SVrefine2Falcon1plusDovetail_12514:HG2_PB_pbsv_10490:HG4_PB_HySA_15403:HG2_PB_SVrefine2Falcon2Bionano_4985:HG4_Ill_MetaSV_5674:HG4_PB_SVrefine2Falcon1Dovetail_6443:HG2_Ill_MetaSV_5432:HG4_PB_SVrefine2PBcRDovetail_5285:HG2_Ill_breakscan11_4093;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12514:HG2_PB_assemblyticsfalcon_28040;NumExactMatchSVs=2;ClusterMaxShiftDist=0.178151;ClusterMaxSizeDiff=0.164706;ClusterMaxEditDist=0.211765;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=299;DistBack=1;DistForward=11458;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=9:112261396-112261393;PctSeqSimilarity=0.9842;PctSizeSimilarity=0.9676;PctRecOverlap=0.9482;SizeDiff=-10;StartDistance=11;EndDistance=12;GTMatch=0;TruScore=96;MatchId=5712.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:13:./.:11:9:16:1:./.:0:0:0:0:0/1:29:10:0/1:15:19:.:.:.
chr9	113167494	HG4_PB_SVrefine2PBcRDovetail_5289	A	AATGGACTCAGATACTAGTAGGAATACAGCATAATTAATATGTATTATGAATACCTAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13744:HG2_PB_HySA_19085:HG3_PB_assemblyticsfalcon_27970:HG2_PB_assemblyticsfalcon_28050:HG4_PB_HySA_15411:HG4_PB_pbsv_10530:HG4_PB_SVrefine2PBcRDovetail_5289:HG2_PB_PB10Xdip_30732:HG4_PB_SVrefine2Falcon1Dovetail_6449:HG4_Ill_SVrefine2DISCOVARDovetail_7625:HG3_PB_SVrefine2PBcRDovetail_4889:HG3_Ill_SVrefine2DISCOVARDovetail_7847:HG2_PB_SVrefine2PBcRplusDovetail_11709:HG2_PB_SVrefine2PB10Xhap12_7687:HG2_PB_SVrefine2Falcon2Bionano_4989;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13744:HG4_PB_SVrefine2PBcRDovetail_5289:HG4_PB_SVrefine2Falcon1Dovetail_6449:HG4_Ill_SVrefine2DISCOVARDovetail_7625:HG3_PB_SVrefine2PBcRDovetail_4889:HG3_Ill_SVrefine2DISCOVARDovetail_7847:HG2_PB_SVrefine2PBcRplusDovetail_11709:HG2_PB_SVrefine2PB10Xhap12_7687:HG2_PB_SVrefine2Falcon2Bionano_4989;NumExactMatchSVs=9;ClusterMaxShiftDist=0.10084;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.283333;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=57;DistBack=14860;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=456;REFWIDENED=9:113167495-113167950;PctSeqSimilarity=0.9947;PctSizeSimilarity=1;PctRecOverlap=0.3684;SizeDiff=0;StartDistance=-36;EndDistance=-36;GTMatch=0;TruScore=78;MatchId=5713.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:54:1/1:4:34:1:20:./.:0:0:0:0:./.:38:2:./.:.:.:.:.:.
chr9	113491523	HG2_Ill_MetaSV_5434	G	GGAAAATAGCTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_19101:HG3_Ill_MetaSV_5615:HG2_PB_pbsv_10502:HG3_PB_pbsv_10245:HG4_PB_pbsv_10539:HG2_PB_assemblyticsPBcR_27303:HG4_PB_assemblyticsfalcon_27479:HG2_PB_assemblyticsfalcon_28057:HG3_PB_assemblyticsfalcon_27979:HG4_PB_HySA_15421:HG2_PB_SVrefine2PBcRplusDovetail_11712:HG2_PB_SVrefine2Falcon2Bionano_4993:HG2_Ill_MetaSV_5434:HG2_PB_SVrefine2Falcon1plusDovetail_12519:HG3_PB_SVrefine2Falcon1Dovetail_6360;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_MetaSV_5434:HG2_PB_SVrefine2Falcon2Bionano_4993;NumExactMatchSVs=2;ClusterMaxShiftDist=0.123267;ClusterMaxSizeDiff=0.123267;ClusterMaxEditDist=0.193252;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=327;DistBack=3;DistForward=26707;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=9:113491524-113491536;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5714.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:33:./.:19:0:12:28:./.:0:0:0:0:0/1:20:17:0/1:5:34:.:.:.
chr9	113571245	HG4_PB_pbsv_10540	T	TTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTATGAGACGGAGTCCTCGCTTGGTCGCCCAGGCTGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGCTCCGCCCCCTGGGTTCACGCCATTTCTCCTGCTCGCCTCCCGAGAAGCTGGGACTACCAGGCGCCCGCCACTTCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACGTGTTAGCCAGGGATGGTCTCGATCTCCTGTTAAACCTCGTGATCCGCGCCACGCCTCGGCCTCCCAAAAGTGCTGATTCCAGGCGTAGCCACCGCGCCCGCCTGACTTTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4094:HG4_PB_assemblyticsfalcon_27480:HG3_PB_assemblyticsfalcon_27980:HG2_PB_SVrefine2PB10Xhap12_7690:HG2_PB_HySA_19102:HG2_PB_PB10Xdip_30739:HG2_PB_assemblyticsfalcon_28058:HG4_PB_pbsv_10540:HG2_PB_pbsv_10503:HG2_PB_SVrefine2Falcon1plusDovetail_12520:HG2_PB_assemblyticsPBcR_27304:HG2_PB_SVrefine2Falcon2Bionano_4994:HG2_PB_SVrefine2PBcRplusDovetail_11713:HG4_PB_SVrefine2Falcon1Dovetail_6454:HG3_PB_SVrefine2Falcon1Dovetail_6361;NumClusterSVs=15;ExactMatchIDs=HG4_PB_pbsv_10540;NumExactMatchSVs=1;ClusterMaxShiftDist=0.237856;ClusterMaxSizeDiff=0.237856;ClusterMaxEditDist=0.269814;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=333;DistBack=34071;DistForward=30339;DistMin=30339;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=9:113571236-113571250;PctSeqSimilarity=0.9469;PctSizeSimilarity=0.97;PctRecOverlap=0.955;SizeDiff=10;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=95;MatchId=5715.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:46:0|1:26:1:4:37:./.:0:0:0:0:0/1:31:8:0/1:10:17:.:.:.
chr9	114736428	HG3_Ill_Spiral_11145	A	ACCAATTAAGTCATAAACTCTGGAGTGGGGCTCAGATGTCAGCAGGCCCTTGT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_14238:HG2_PB_pbsv_10508:HG3_PB_HySA_15905:HG3_PB_pbsv_10249:HG4_PB_assemblyticsfalcon_27490:HG4_PB_pbsv_10545:HG2_PB_PB10Xdip_30745:HG2_PB_HySA_19107:HG4_Ill_manta_2565:HG4_Ill_Krunchall_14825:HG4_Ill_GATKHC_17087:HG4_Ill_GATKHCSBGrefine_7333:HG4_Ill_250bpfermikitraw_14127:HG4_Ill_150bpfermikitraw_13531:HG3_PB_assemblyticsfalcon_27986:HG3_Ill_manta_2467:HG3_Ill_Spiral_11145:HG3_Ill_Krunchall_14285:HG3_Ill_GATKHC_17006:HG3_Ill_GATKHCSBGrefine_7096:HG3_Ill_250bpfermikitraw_13859:HG3_Ill_150bpfermikitraw_13425:HG2_PB_assemblyticsfalcon_28064:HG2_PB_assemblyticsPBcR_27310:HG2_Ill_manta_3013:HG2_Ill_Krunchall_14565:HG2_Ill_GATKHC_17051:HG2_Ill_GATKHCSBGrefine_7183;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14238:HG4_Ill_manta_2565:HG4_Ill_Krunchall_14825:HG4_Ill_GATKHC_17087:HG4_Ill_GATKHCSBGrefine_7333:HG4_Ill_250bpfermikitraw_14127:HG4_Ill_150bpfermikitraw_13531:HG3_PB_assemblyticsfalcon_27986:HG3_Ill_manta_2467:HG3_Ill_Spiral_11145:HG3_Ill_Krunchall_14285:HG3_Ill_GATKHC_17006:HG3_Ill_GATKHCSBGrefine_7096:HG3_Ill_250bpfermikitraw_13859:HG3_Ill_150bpfermikitraw_13425:HG2_PB_assemblyticsfalcon_28064:HG2_PB_assemblyticsPBcR_27310:HG2_Ill_manta_3013:HG2_Ill_Krunchall_14565:HG2_Ill_GATKHC_17051:HG2_Ill_GATKHCSBGrefine_7183;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0925926;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.311927;PBcalls=10;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=13340;DistForward=1946;DistMin=1946;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=9:114736421-114736471;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5716.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:1:31:1:25:./.:0:0:0:0:1/1:0:71:./.:.:.:.:.:.
chr9	114869030	HG2_PB_SVrefine2Falcon1plusDovetail_12522	T	TAAAAATAAAAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6364:HG2_PB_assemblyticsfalcon_28065:HG2_PB_pbsv_10509:HG3_PB_pbsv_10250:HG3_PB_HySA_15907:HG4_PB_assemblyticsfalcon_27491:HG3_PB_assemblyticsfalcon_27987:HG3_PB_HySA_15906:HG2_Ill_breakscan11_4095:HG2_PB_SVrefine2Falcon1plusDovetail_12522:HG4_PB_SVrefine2Falcon1Dovetail_6458:HG2_PB_SVrefine2Falcon2Bionano_4997:HG3_PB_SVrefine2PBcRDovetail_4893:HG2_PB_HySA_19108;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12522;NumExactMatchSVs=1;ClusterMaxShiftDist=0.118003;ClusterMaxSizeDiff=0.118003;ClusterMaxEditDist=0.154312;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=61241;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=9:114869031-114869043;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5717.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:0|1:25:2:0:24:./.:0:0:0:0:0/1:35:11:0/1:13:28:.:.:.
chr9	115969624	HG2_Ill_MetaSV_5437	A	ACTAATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6465:HG4_PB_pbsv_10557:HG4_PB_HySA_15432:HG2_PB_pbsv_10518:HG2_PB_HySA_19122:HG2_PB_assemblyticsfalcon_28077:HG2_Ill_breakscan11_4097:HG4_Ill_GATKHCSBGrefine_7341:HG2_Ill_MetaSV_5437:HG2_Ill_GATKHCSBGrefine_7192:HG2_PB_SVrefine2Falcon1plusDovetail_12529;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7192:HG2_Ill_MetaSV_5437:HG4_Ill_GATKHCSBGrefine_7341;NumExactMatchSVs=3;ClusterMaxShiftDist=0.140888;ClusterMaxSizeDiff=0.140888;ClusterMaxEditDist=0.196018;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=657;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=9:115969625-115969636;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5718.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:33:0|1:45:1:0:29:./.:0:0:0:0:./.:19:3:0/1:7:33:.:.:.
chr9	117040502	HG2_PB_SVrefine2PBcRplusDovetail_11725	T	TGGTGATGGTGGTAGTACTGATGATGGTGTTGGTGGTGGTGATGATGATGAAGATGATGGGGGTGTTGATGGTGGTAGTGGTGGTAGTGGTGACTGTGATGAGGTGGTGATGGTGGTGCTGGTGCTGGTGGCGATGGTGATAGTGGAGTGGAGGTGAGGGTGATGATGGTGCTGGTGGCGATGGTGATAGTGGGGGTGGGAGTGGAGTGGAGGTGAGGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGATGGTGGTTGGTGGTGGTGATGGTGGTGGTGGTTGGTGGTGGTGATGATGGCGGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4902:HG4_PB_SVrefine2PBcRDovetail_5302:HG4_PB_HySA_15447:HG4_PB_assemblyticsfalcon_27514:HG3_PB_SVrefine2Falcon1Dovetail_6375:HG2_PB_HySA_19136:HG2_PB_PB10Xdip_30757:HG4_PB_pbsv_10564:HG2_PB_SVrefine2PBcRplusDovetail_11725:HG4_PB_SVrefine2Falcon1Dovetail_6469:HG2_PB_SVrefine2PB10Xhap12_7705:HG2_PB_SVrefine2Falcon2Bionano_5008:HG2_PB_SVrefine2Falcon1plusDovetail_12532;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12532:HG2_PB_SVrefine2Falcon2Bionano_5008:HG2_PB_SVrefine2PB10Xhap12_7705:HG2_PB_SVrefine2PBcRplusDovetail_11725:HG4_PB_SVrefine2PBcRDovetail_5302;NumExactMatchSVs=5;ClusterMaxShiftDist=0.22427;ClusterMaxSizeDiff=0.22427;ClusterMaxEditDist=0.297935;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=308;DistBack=9943;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=328;REFWIDENED=9:117040503-117040830;PctSeqSimilarity=0.9514;PctSizeSimilarity=0.9578;PctRecOverlap=0.3916;SizeDiff=13;StartDistance=-181;EndDistance=-181;GTMatch=0;TruScore=76;MatchId=5719.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:0:21:0:20:./.:0:0:0:0:1/1:0:16:1/1:0:25:.:.:.
chr9	117928262	HG2_Ill_MetaSV_5439	T	TAAAAGAAAGAGCATAGTACGTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAACTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12534:HG4_PB_pbsv_10567:HG4_PB_assemblyticsfalcon_27518:HG2_PB_pbsv_10525:HG4_PB_HySA_15451:HG2_PB_assemblyticsfalcon_28092:HG2_PB_HySA_19142:HG4_Ill_GATKHCSBGrefine_7345:HG2_Ill_MetaSV_5439:HG4_PB_SVrefine2Falcon1Dovetail_6471;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_MetaSV_5439:HG4_Ill_GATKHCSBGrefine_7345;NumExactMatchSVs=2;ClusterMaxShiftDist=0.167504;ClusterMaxSizeDiff=0.167504;ClusterMaxEditDist=0.251256;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=303;DistBack=41486;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=9:117928263-117928281;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=0.9934;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:23:0|1:27:0:1:21:./.:0:0:0:0:0/1:25:8:0/1:8:33:.:.:.
chr9	118010704	HG3_Ill_250bpfermikitraw_13881	A	ATCCTATTAGTTTATAGGATATATGTGTATATCCTATTAGTTTATAGGATATATGTGTATATCCTATAAACTAATAGGATATACACATATATCCTATATACATATATCCCATTT	20	PASS	ClusterIDs=HG2_PB_HySA_19143:HG3_PB_pbsv_10270:HG3_Ill_GATKHCSBGrefine_7107:HG3_Ill_250bpfermikitraw_13881:HG2_PB_SVrefine2Falcon1plusDovetail_12535:HG2_Ill_GATKHCSBGrefine_7197:HG2_PB_assemblyticsfalcon_28093;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7197:HG2_PB_SVrefine2Falcon1plusDovetail_12535:HG3_Ill_250bpfermikitraw_13881:HG3_Ill_GATKHCSBGrefine_7107;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0603448;ClusterMaxSizeDiff=0.0517241;ClusterMaxEditDist=0.12069;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=113;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=62;REFWIDENED=9:118010705-118010766;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=5721.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:75:1/1:4:23:2:31:./.:0:0:0:0:0/1:2:13:./.:.:.:.:.:.
chr9	118083866	HG2_Ill_MetaSV_5440	A	AAAGTGTGGCATATTTTTTTTTTTTTTTTTTTTTTGTAATTTCATTTTTATTTATTTATTTTTTTTTTTTTTAATTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGGTATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTTGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTACAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTGAAACAAATTTACAAG	20	PASS	ClusterIDs=HG3_PB_HySA_15938:HG4_PB_pbsv_10570:HG2_PB_pbsv_10527:HG4_PB_HySA_15453:HG3_PB_pbsv_10271:HG2_PB_assemblyticsPBcR_27340:HG2_PB_assemblyticsfalcon_28096:HG4_PB_assemblyticsfalcon_27520:HG2_PB_SVrefine2PBcRplusDovetail_11727:HG2_PB_SVrefine2Falcon2Bionano_5010:HG2_Ill_MetaSV_5440:HG2_10X_SVrefine210Xhap12_7515:HG2_PB_SVrefine2Falcon1plusDovetail_12536:HG2_PB_HySA_19145:HG4_PB_SVrefine2PBcRDovetail_5305:HG3_PB_SVrefine2Falcon1Dovetail_6378:HG4_PB_SVrefine2Falcon1Dovetail_6472;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_5440:HG2_PB_SVrefine2Falcon2Bionano_5010:HG2_PB_SVrefine2PBcRplusDovetail_11727;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0640415;ClusterMaxSizeDiff=0.0631761;ClusterMaxEditDist=0.166385;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1159;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=9:118083867-118083880;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5722.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:17:37:0|1:24:1:0:37:./.:0:0:0:0:0/1:27:18:0/1:41:189:.:1189:.
chr9	119602746	HG2_PB_SVrefine2PB10Xhap12_7712	C	CCCTCACCTCCCGGACGGGGCGGCTGGCCGGACGGGGGGCTGACCCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCAGTGTGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAGGCGCCCCTCACTTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCGCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGACCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTGCCTCCCGGACGGAGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGACCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCAGACGGGGTGGCTGGCCGGGCGGGGGGCTGATCCCCCCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12540:HG2_PB_pbsv_10531:HG2_Ill_GATKHCSBGrefine_7200:HG3_PB_pbsv_10275:HG2_PB_PB10Xdip_30765:HG4_PB_pbsv_10575:HG4_PB_SVrefine2Falcon1Dovetail_6474:HG4_PB_SVrefine2PBcRDovetail_5308:HG3_PB_SVrefine2PBcRDovetail_4908:HG2_PB_SVrefine2PBcRplusDovetail_11731:HG2_PB_SVrefine2PB10Xhap12_7712:HG2_Ill_SVrefine2DISCOVARplusDovetail_13777:HG2_PB_SVrefine2Falcon2Bionano_5013:HG3_PB_SVrefine2Falcon1Dovetail_6381;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13777:HG2_PB_SVrefine2PB10Xhap12_7712:HG2_PB_SVrefine2PBcRplusDovetail_11731;NumExactMatchSVs=3;ClusterMaxShiftDist=0.101291;ClusterMaxSizeDiff=0.101291;ClusterMaxEditDist=0.264914;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=528;DistBack=23570;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=201;REFWIDENED=9:119602747-119602947;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.9962;PctRecOverlap=0.8393;SizeDiff=2;StartDistance=-84;EndDistance=-84;GTMatch=0;TruScore=94;MatchId=5723.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:61:1/1:1:8:1:9:./.:0:0:0:0:1/1:0:17:1/1:3:78:.:.:.
chr9	120536520	HG2_Ill_svaba_13239	C	CTTTTTTAGAGACAGGGTCTATCTCTTCAAATCTCATTTTCTTCGTCTTCCT	20	PASS	ClusterIDs=HG4_PB_pbsv_10578:HG4_PB_HySA_15470:HG4_Ill_svaba_13330:HG4_Ill_Krunchall_14888:HG4_Ill_GATKHC_17144:HG4_Ill_GATKHCSBGrefine_7351:HG4_Ill_250bpfermikitraw_14175:HG4_Ill_150bpfermikitraw_13575:HG2_Ill_svaba_13239:HG2_Ill_manta_3020:HG2_Ill_Krunchall_14613:HG2_Ill_GATKHC_17101:HG2_Ill_GATKHCSBGrefine_7202:HG2_Ill_250bpfermikitraw_14282:HG2_Ill_150bpfermikitraw_13419:HG2_PB_HySA_19167:HG4_PB_assemblyticsfalcon_27538:HG2_Ill_SpiralSDKrefine_18121;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13419:HG2_Ill_250bpfermikitraw_14282:HG2_Ill_GATKHCSBGrefine_7202:HG2_Ill_GATKHC_17101:HG2_Ill_Krunchall_14613:HG2_Ill_manta_3020:HG2_Ill_svaba_13239:HG4_Ill_150bpfermikitraw_13575:HG4_Ill_250bpfermikitraw_14175:HG4_Ill_GATKHCSBGrefine_7351:HG4_Ill_GATKHC_17144:HG4_Ill_Krunchall_14888:HG4_Ill_svaba_13330;NumExactMatchSVs=13;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.242424;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=30988;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=57;REFWIDENED=9:120536491-120536547;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5724.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:./.:24:11:14:9:./.:0:0:0:0:0/1:22:18:./.:.:.:.:.:.
chr9	121396219	HG2_10X_SVrefine210Xhap12_7527	A	ATTGCCGAGACCAGCTCGATCAGGGAGACCCTAACACAGTGGTTCTAGAGGAATTAAAGACACATACACAGAAATATAGAGGTGTAAAGTGGGAAATCAGGGTTCTCACAGCCTTCAGAGCTGAGAGCCCTGAACAGAGATTTACCCATGTATTTATTAACAGCAAGCCAATCATTAGCATTTTTCTATAGATATTTGATTAACTAAAAGTATCCCTTATGGGAAATGAATGGATGGGCTGAAATAAAGGGGTGGGTCTGGCTAGTTATTTGCAGCAGGAACATGCCCTTAAGGCACAGATCACTCATGCTGTTGTTTGTGGTTTAAGAACGCCTTTAAGTGATTTTCCGCCCTGGGCTGGCCAGGTGTTCCTTGCCCTCATCCCAGTAAACCCACAAACTTCCAGCGTGGGTGTTATGGCCATCATGAACATGTCACAGTGCTGCAGAGATTTTGTTTATGGCCAGTTTGGGGGCCAGTTTATGGCCAGATTTTGGGGGGGGCCTCTTCCCAACATGTCCCCCTTCTTTGATTTGCAAATCAATAAAAGCAAAGGCAGCTTTGTCACGGTGAGCTACTTCTCGCAGGAGTCAGGATACACATCTGCAGACTATACAAAGACAAAAAACACAGATTAAAAGCACAATCATCACTGAAATTACAGAGCTTCCAAGTGTTTTTATCCATTTTAATGGGTTACTAGCTGCTTATTTGTCTGCAGCTCCTTTAAGCACTCTAGTTCCTGGCATTAAGGTCAGGTGTGCCTGGGATGCTTTAAATATTTGTTCTTTTAATTTTGCAATATTCAAAAACAAATTTGTAAAGTGTCCTTTTAGATGCTTTTTTATTCTTTCCCAAATTTTGATCTTATTAAGAGCTATTATTAGTTTCCACAAATCCTTAATGTTTAGCTCCTACAGCAGGCCATATCATTTGAGGTTGAGGTGCCACTATACCGCCATGGTTTCAGATAATAGGAACTCTTGCCATACTTATTATGTCTACCATCTGACCATTTTGTTCAGATCAGCTGAACATAGTGTGGCCGTGGCACACAGACTGAGAGGTGCAATTCAAGCTAAACATCCCCTTAGGGGACCAATTAATAATGATTCCACAGGAATCATTGTGCAGCACCTCTCCCTGTTCTGCAATGCAATCTTCCTAAACAAGTATGTTCATTATTTCTGGCCAGGTCCAATCCTGTTTACAGATAGGATTTTTAGGGCAGTATGCCTCAATAATAGGAGCAGATTTATTATGGTAAATACTGAGATCAGAAAGCATGTGTAACTGTGTCATAGAGTGATTACATCCAGGCATTATTGCTAGCCAAGATTGATAAATATGCCCAATAAGTATAATTGTTCTCTGTGTCAGCCCTTGTTGAAGGAATACTCATGGCAAAGGTGATCATCACTATCATAGCTACCACTAAATTACTCATTGTGACTGTCTGTCCCACTTTCCTTAGGTTTTCTTCTGCCATCTGTGACAGCTTCTTGATCTGTCCCCAGGTGGGTGGCTATGTTCAACGGGTGTTGCTCATGACAGATGGGGTCCTCCTCAGCCTCAGCCTAAACATGGCTGCAACCGGGGGTCCCCAGGATCCTCCCAGAATCTCTTCCTTGGCATTTGGCTCATGATAAGGTTTCAGGTGTCTTGATGGTGTCCAAATTGGCTGTTGATTTTGGCCTGGAGAAACACAAGCATAACATCTACCCCAAGTTATTATTTTACCTATTTCCCAACTTTTTGTTATTGGATCTCTCTACCAAACCAGTTGTTCTGCTTCTGTCTTTGCAGCTGGTTTCTATAGATGCTGTTCAGCTGCTGATTACATCTGGCCTTTGGGCAGGCTCAAAAAATTTAAGGTTAATAATGCTAGATTCAATTGTGTATGGGCTGTCCCATAATCCCTATTTCTCCCCCTTTTTTGTTTTTGTCACCAGTTGTTTATCTGTATGAAATAGTAACTGAGAATTTTTAATTAACTGTGTGGAATGAACCATGTATGAAGAATCAGAAATCACATTAATAGGCATATCCAAAGCAGTCAATACCTTAATTACAGCTACAAGCTCCACTTTTTGAGCTGAAGTATAGGGCATCTGGAAAACTTTACCTTTTGATCCAGAGTAAGAAGCTTTACCATTACTAGACCCATCTGTAAAACAATGAAAACGCTTAGCAGGCTGCAGGTTGTTTACTGCAGGAATTGTAAATGCAAACTGTTCACAGTCTTGCTCAGCTAAGGGGATAGTAAAGAAACAGTCTTTTAAATCTATGGCTATTAAAGGCCAATTTTTTTTAATTATAGTAGGAGAAGGAAATCCTGGATGTAATGCTTCCATAGGTTATATAACTGAACTGATGGCTCTGAAGTCAGTTAACATTCTCCGTTTACCTGATTTTTACTTAATTATGAAAACTGGAGAATTCCAAGGGGAAAATGTTGGAGATATGTGCCCATTTTCTAATTGTTCAGTAACTGATTTATCTAAAGCCTCCAGTTTCTCTTTTCTTAGTGACCATTGTTCTATCCAAATTGGCTTATCTGTTAACCATTTTAAAGGTATAGGTTCTGGAGGCTTAACAATGGCTGCCATCAAAAATGATATCCTAATCTTTGTCAGGAACTTTGTCTTTCCACTTGAAGCAGTTTTTTCAAAACTTGCAAATTTTTTCCTAGTCCCATACTAGGGACATACCCCCATTTCATGCATTGTATGTTGACTTTGAGGGCTATATAATTGTTCTGGAATTAGAACTTGTGCTCCCTATTGTTGTAATAAATCTCTTCCCCATAAATTTATAGGTACAGAAGTTATAATTGGTTGAATAGTCCCAGGTTGCCCATCGGGCCCTTCACAATGCAAAATATAACTACTGTGATATACTTCAGGGGCTTTACCAACTCCAACTATGTTAAATTGAGCGGGTTGAATTGGCCATGCAGACAGCCAGTGCTGTAGAGAAATGATTGAAATGTCCACTCCTGTATCTACCAAACCTTTAAATTTCTTTCCCTGAATAGTTATTTCACAGGTAGGACATTTATCAGTAATTTGATTTACCCAATAAGCTGCTTTGCTTTGTTTATCTGTGCTTCCAAATCCTCCTGTTCATTTAATTTCACTTTTTCCCATTCCCACATACGGCACAATCAGGAGCTGTGCTATGCCCTCTCCTGGTTCTGCTTTCCAGGGAACAGAAGTAGATATAACAATTTGAATTTCCCCATTATAATCTGACTCAATGACTCCTGTTTGTATTTGTACCCCTTTTCAATTTAAAGTAGACCTTCCTAAAAGTAATCCTATTGTACCTGCTGGCAAGGGTCCACAGACTCCTGTTGGGACCTTTTGCAGGGGTTCCCTAGGCAGAAGACTCACAGCTTTTGTGCAGCATAAATCTACTGCAGCACTACTGGCTGTGGCGGGGAATAGACATTATACAGGGGTGACGGAATGGCCTGAGCTGGAAATGCCCCAGTTTGGAATGGGGCCCGGGACAGGCCCCTCATGGCATTTCCCGAAATCGGGTTCCCTTCTTTATCAAACTTAGAGTGACACTGATTAACCCAATGATTTCCTTTTCTCCATTTTGGATATATTTCAGGCTCAGCAGTTTTCTTTTTTCCCCTATCTGGTGGCCTGACTCGCTGATTTTTTCTACATTCTTTTTTAGTATGACCATGCTTCCCACAGTTAAAACAAGCTCCAGGAAATGGAGTATTTCCTTTATCCACTCTCAGTCCTGCCATTGCCTGTGCCAACAAAGTAGCTTTATGCAGATTACCTCTGATACCATCACAAGCCTTGATGTAATCAACTAAATGTGCTTTCCTGAATTTAAAAGGAAAAGGCTCAAATATAGCTATAATATTTCCCCGTTGATCTGGGGGGTGTATTCTAACAGGGAACTGCCAAGCCTCTAAATCACCCTCTCATCTCGCTTGCTGAATTCCTGCCTGAATAGAACTAAGAGCGGTCGCTCGAGGCGCGGCTCGAACAGTCACTGGGGCAACTACTTTTTGCCCAGTGTCCTCTGGAAAAGAAAGATATGGAGGGTCTTTTCTTCAAAATAATAATGAGGGGGTGCAGAAGGGTAGGGATGAACCTCTCCCTCCTTTGCCGCTTTAGCTTTAGCTGGCAAATAAACATGCTCTATAACCTCTTCTGTTACCTCGTTATACTCTCCTTCCTCCTTATTATCAGTGTGAAAAAGTTCCAAGATGGAACAAACCAGACTCCACACTTGTCCCATTATTAACCTGATGCTTCCGAGCTCCCCTTCTTACTCACCATGGGGATTGCTTTAAGAGTACTCGGGGGTCCTCCAGCTTAGTTCCGTGTTCTCCAACTGTCACTCCAGCAACACTTCAACCTGGGTTCGAGCCCCCATGATGGACGCCAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12544:HG4_PB_pbsv_10582:HG2_PB_HySA_19179:HG4_PB_HySA_15479:HG3_PB_HySA_15968:HG2_PB_PB10Xdip_30769:HG3_Ill_SVrefine2DISCOVARDovetail_7888:HG3_PB_SVrefine2PBcRDovetail_4913:HG4_PB_SVrefine2PBcRDovetail_5312:HG4_Ill_SVrefine2DISCOVARDovetail_7657:HG2_10X_SVrefine210Xhap12_7527:HG2_PB_SVrefine2PB10Xhap12_7717:HG2_PB_SVrefine2PBcRplusDovetail_11735:HG2_PB_SVrefine2Falcon2Bionano_5017:HG4_PB_SVrefine2Falcon1Dovetail_6478;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7527:HG4_Ill_SVrefine2DISCOVARDovetail_7657;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0621118;ClusterMaxSizeDiff=0.0621118;ClusterMaxEditDist=0.149479;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=4418;DistBack=24649;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=513;REFWIDENED=9:121396220-121396732;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9993;PctRecOverlap=0.9061;SizeDiff=3;StartDistance=-413;EndDistance=-413;GTMatch=0;TruScore=96;MatchId=5725.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:42:0|1:24:0:1:38:./.:0:0:0:0:./.:0:1:0/1:151:354:.:4293:.
chr9	121510375	HG2_Ill_GATKHCSBGrefine_7207	G	GTAAAGATCTTAAAACCTGACCCATTTATAAGTGGCAACTTAGTATATGATGAAGATAGTCCTATAAACTAATGAGGCAAAAAGAGTA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13784:HG2_PB_pbsv_10537:HG2_PB_assemblyticsfalcon_28121:HG2_PB_HySA_19181:HG3_Ill_GATKHCSBGrefine_7117:HG3_PB_HySA_15969:HG3_Ill_250bpfermikitraw_13919:HG2_Ill_Krunchall_14623:HG2_Ill_GATKHCSBGrefine_7207:HG3_Ill_SVrefine2DISCOVARDovetail_7889:HG2_PB_SVrefine2Falcon2Bionano_5018;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7207:HG2_Ill_Krunchall_14623:HG3_Ill_250bpfermikitraw_13919:HG3_Ill_GATKHCSBGrefine_7117;NumExactMatchSVs=4;ClusterMaxShiftDist=0.129412;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.258824;PBcalls=5;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=87;DistBack=18542;DistForward=62276;DistMin=18542;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=167;REFWIDENED=9:121510372-121510538;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5726.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:26:0|1:39:5:1:22:./.:0:0:0:0:0/1:27:20:./.:.:.:.:.:.
chr9	121930878	HG2_Ill_GATKHC_17114	A	ATTGTAAACAATCAGCAATGAAAAAGACCTTAGGGGTTATTTGTTTACTTAAACCACATG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7530:HG2_PB_HySA_19187:HG3_PB_pbsv_10285:HG4_PB_HySA_15483:HG2_PB_pbsv_10541:HG3_PB_HySA_15974:HG4_PB_pbsv_10585:HG4_Ill_svaba_13344:HG4_Ill_Krunchall_14900:HG4_Ill_GATKHC_17160:HG4_Ill_GATKHCSBGrefine_7356:HG4_Ill_250bpfermikitraw_14189:HG4_Ill_150bpfermikitraw_13593:HG3_Ill_svaba_13421:HG3_Ill_Krunchall_14352:HG3_Ill_GATKHC_17067:HG3_Ill_GATKHCSBGrefine_7120:HG3_Ill_250bpfermikitraw_13924:HG3_Ill_150bpfermikitraw_13481:HG2_Ill_svaba_13256:HG2_Ill_Krunchall_14625:HG2_Ill_GATKHC_17114:HG2_Ill_GATKHCSBGrefine_7209:HG2_Ill_250bpfermikitraw_14297:HG2_Ill_150bpfermikitraw_13432:HG4_Ill_SVrefine2DISCOVARDovetail_7661;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13432:HG2_Ill_250bpfermikitraw_14297:HG2_Ill_GATKHCSBGrefine_7209:HG2_Ill_GATKHC_17114:HG2_Ill_Krunchall_14625:HG2_Ill_svaba_13256:HG3_Ill_150bpfermikitraw_13481:HG3_Ill_250bpfermikitraw_13924:HG3_Ill_GATKHCSBGrefine_7120:HG3_Ill_GATKHC_17067:HG3_Ill_Krunchall_14352:HG3_Ill_svaba_13421:HG4_Ill_150bpfermikitraw_13593:HG4_Ill_250bpfermikitraw_14189:HG4_Ill_GATKHCSBGrefine_7356:HG4_Ill_GATKHC_17160:HG4_Ill_Krunchall_14900:HG4_Ill_svaba_13344;NumExactMatchSVs=18;ClusterMaxShiftDist=0.05;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.184874;PBcalls=6;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=59;DistBack=32648;DistForward=47897;DistMin=32648;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=9:121930874-121930939;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5728.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:33:0|1:26:6:3:20:./.:0:0:0:0:0/1:34:24:./.:.:.:.:.:.
chr9	122562257	HG4_PB_pbsv_10589	T	TCATATATATTACATATAATATACATATAATATACATATATATACATATATAGACATATATATACAATATATAACATATATATCATTATATACATATATATACATATATACATATATATACATTATATATACAATATATATATACATATATATATACATATATATACATATATAATAATACTATATATACATATATATATAA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13788:HG2_PB_HySA_19192:HG4_PB_HySA_15489:HG4_PB_pbsv_10589:HG2_PB_pbsv_10546;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_10589;NumExactMatchSVs=1;ClusterMaxShiftDist=0.040201;ClusterMaxSizeDiff=0.040201;ClusterMaxEditDist=0.171285;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=201;DistBack=30409;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=9:122562258-122562257;PctSeqSimilarity=0.9488;PctSizeSimilarity=0.995;PctRecOverlap=0.8867;SizeDiff=-1;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=94;MatchId=5729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:36:./.:8:20:30:7:./.:0:0:0:0:0/1:26:11:./.:.:.:.:.:.
chr9	123055170	HG2_PB_SVrefine2PBcRplusDovetail_11739	T	TTCCTTTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_19197:HG4_PB_pbsv_10592:HG2_PB_pbsv_10549:HG4_PB_assemblyticsfalcon_27560:HG3_PB_pbsv_10291:HG2_PB_assemblyticsPBcR_27379:HG3_PB_assemblyticsfalcon_28053:HG2_PB_assemblyticsfalcon_28134:HG2_PB_HySA_19198:HG3_PB_HySA_15983:HG2_Ill_breakscan11_4099:HG2_PB_PB10Xdip_30775:HG2_Ill_MetaSV_5446:HG4_PB_SVrefine2PBcRDovetail_5314:HG3_PB_SVrefine2PBcRDovetail_4918:HG4_PB_SVrefine2Falcon1Dovetail_6484:HG4_Ill_MetaSV_5692:HG4_Ill_GATKHCSBGrefine_7363:HG3_Ill_MetaSV_5625:HG3_Ill_GATKHCSBGrefine_7125:HG2_PB_SVrefine2PBcRplusDovetail_11739:HG2_PB_SVrefine2PB10Xhap12_7722:HG2_PB_SVrefine2Falcon2Bionano_5023:HG2_Ill_GATKHCSBGrefine_7216:HG3_PB_SVrefine2Falcon1Dovetail_6389:HG2_PB_SVrefine2Falcon1plusDovetail_12548:HG2_10X_SVrefine210Xhap12_7536;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7216:HG2_PB_SVrefine2Falcon2Bionano_5023:HG2_PB_SVrefine2PB10Xhap12_7722:HG2_PB_SVrefine2PBcRplusDovetail_11739:HG3_Ill_GATKHCSBGrefine_7125:HG3_Ill_MetaSV_5625:HG4_Ill_GATKHCSBGrefine_7363:HG4_Ill_MetaSV_5692:HG4_PB_SVrefine2Falcon1Dovetail_6484;NumExactMatchSVs=9;ClusterMaxShiftDist=0.10989;ClusterMaxSizeDiff=0.10989;ClusterMaxEditDist=0.223903;PBcalls=19;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=317;DistBack=31767;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=9:123055171-123055181;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5730.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:./.:0:4:0:2:./.:0:0:0:0:1/1:0:22:1/1:2:74:.:.:.
chr9	123135192	HG4_Ill_250bpfermikitraw_14199	A	ATCCAGGCTGAAGGAGACTAGAGACATGATGGCTGGATGCAACACTCGTGATACTGACCCCGGGAAGAGTGACGAACTGC	20	PASS	ClusterIDs=HG3_PB_pbsv_10292:HG4_Ill_GATKHC_17170:HG4_PB_pbsv_10593:HG4_PB_HySA_15496:HG2_PB_assemblyticsfalcon_28135:HG2_PB_HySA_19199:HG4_Ill_GATKHCSBGrefine_7364:HG4_Ill_250bpfermikitraw_14199:HG3_Ill_GATKHC_17075:HG3_Ill_GATKHCSBGrefine_7126:HG3_Ill_250bpfermikitraw_13928:HG2_Ill_GATKHC_17126:HG2_Ill_GATKHCSBGrefine_7217:HG2_Ill_250bpfermikitraw_14304:HG3_PB_HySA_15984;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14304:HG2_Ill_GATKHCSBGrefine_7217:HG2_Ill_GATKHC_17126:HG3_Ill_250bpfermikitraw_13928:HG3_Ill_GATKHCSBGrefine_7126:HG3_Ill_GATKHC_17075:HG4_Ill_250bpfermikitraw_14199:HG4_Ill_GATKHCSBGrefine_7364:HG4_Ill_GATKHC_17170;NumExactMatchSVs=9;ClusterMaxShiftDist=0.157576;ClusterMaxSizeDiff=0.157576;ClusterMaxEditDist=0.321429;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=79;DistBack=80010;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=270;REFWIDENED=9:123135100-123135369;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5731.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:1|0:4:13:19:6:./.:0:0:0:0:0/1:15:13:./.:.:.:.:.:.
chr9	124658038	HG4_Ill_SVrefine2DISCOVARDovetail_7670	T	TTGTGTGTGTCCGTAAGTGTGGTTGTGTGGGTTTGTGTGACTGTGATTGTATCTGTGTGTGTCCGTGTGTGTGGTTGCGTTTGTGAGTGTGTCTGTGTGTATGTGTGGGTGTGTGTGGATGTTTGTGTGTGTGTGAATGTGTGGGTGTGTGTTTGTGTGTCTGTGGGTGTGTGTTTGTGTGTCTGTGTGGGTGTGTTTTGTGTTTTTGTGTGTGTGGATGTGCGGGTGTGTTTTGTGTGTCTGTGTGTGGATGTGTGGGTGTGTTTCGTGTGTTTGTGTATCTGTGGATGTGTGGGTGTGTTTTGTGTGTGTGGATGTGCGGGTGTGTTTTGTGTGTCTGTGTGTGGATGTGTGGGTATGTTTTGTGTGTTTGTGTATCTGTGTATGTGTGGGTGTGTTTTGTGTGTTTCTGAGTGTGTGTCTGTGTGGATGTGTGGGTGTGTGTGTCTGTGTGGGGGTGTTTTGTGCAGTGGTGTGTCTGTGTGTGGATGTGTGGGTGTGTTTTATATGTTTGTGAGTGTGTATGTGTGGGTGTGTTTTGTGTGTGGGTGTGTGTCTGTGCTTATGTGTGGGTGTGTCTGTGTGTGTGGATGTGTGGGTGTGTTTGTGTGTTTGTGGATGTGTGGGTGTGTTTTTTGTGTTTGTGTGTAGATGTGTGGGTGTGTGTATATGTGGGTGTGTTTTGTGTTTGTGAGTGTGTGTAGATATGTGGACGTGTTTTGTGTGTGTGTGGATGTTTTGTGTGTGTGTATGTGTGGGTGTTTGTGTGTGCGAATGCGGTTGTATGGGTTTGTGTGACTGTGTGTGATGTGTGTGTTCATTTGTGTGTTTGTGTGTGTGTGGATGTGTGGGTGTGGGTGTGGATGTGTAGGTGTGTTGTGTTTGTGGGTGTGTTTGTGTGTATGTGTGGGTGTATTTGTGTGTCTGTGTGTAGATGGGTGGCTGTGGGTGTGTGTGGCTGTGTGTGTTTTGTGTGTGTGTCTGTGTGGATGTGTGGGTGTGTGTTTGTGTCTGTGTGAGTGTGTTTGTGTCTGTGTGTGGATGTGTGGGTGTAGTGTTTGTGAGTGTGAGTCTGTGTCGTGTGCTTTGTGTGTTTGTGTGGATGTGTGGGTGTGTTTGTGTGTGTGGATGTG	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_7899:HG2_PB_pbsv_10557:HG2_PB_PB10Xdip_30776:HG3_PB_pbsv_10296:HG4_PB_assemblyticsfalcon_27567:HG2_PB_assemblyticsPBcR_27391:HG3_PB_assemblyticsfalcon_28059:HG2_PB_assemblyticsfalcon_28147:HG2_PB_SVrefine2PB10Xhap12_7727:HG2_Ill_MetaSV_5449:HG4_Ill_SVrefine2DISCOVARDovetail_7670:HG2_Ill_SVrefine2DISCOVARplusDovetail_13795:HG3_PB_SVrefine2PBcRDovetail_4922:HG4_PB_SVrefine2Falcon1Dovetail_6488:HG2_PB_SVrefine2PBcRplusDovetail_11746:HG3_Ill_MetaSV_5628:HG3_PB_SVrefine2Falcon1Dovetail_6393:HG2_PB_SVrefine2Falcon1plusDovetail_12553:HG4_PB_pbsv_10598:HG4_PB_SVrefine2PBcRDovetail_5317:HG2_PB_SVrefine2Falcon2Bionano_5027;NumClusterSVs=21;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_7670;NumExactMatchSVs=1;ClusterMaxShiftDist=0.156584;ClusterMaxSizeDiff=0.156584;ClusterMaxEditDist=0.224199;PBcalls=16;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1132;DistBack=-1;DistForward=1880;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=37;REFWIDENED=9:124658039-124658075;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9965;PctRecOverlap=0.9965;SizeDiff=4;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=5732.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:1:35:0:26:./.:0:0:0:0:1/1:0:15:./.:12:177:.:1217:.
chr9	125331766	HG2_Ill_250bpfermikitraw_14321	A	ATTTTTTTGCAATTAAAGTTTTTGAGTAAGCATATTCATTCATACCTTGTGAAT	20	PASS	ClusterIDs=HG2_PB_HySA_19212:HG3_PB_pbsv_10300:HG2_PB_pbsv_10561:HG2_Ill_breakscan11_4101:HG2_PB_assemblyticsPBcR_27395:HG3_Ill_svaba_13437:HG3_Ill_manta_2481:HG3_Ill_Krunchall_14370:HG3_Ill_GATKHC_17089:HG3_Ill_GATKHCSBGrefine_7135:HG3_Ill_250bpfermikitraw_13941:HG3_Ill_150bpfermikitraw_13496:HG2_PB_assemblyticsfalcon_28151:HG2_Ill_svaba_13276:HG2_Ill_manta_3025:HG2_Ill_Krunchall_14648:HG2_Ill_GATKHC_17142:HG2_Ill_GATKHCSBGrefine_7226:HG2_Ill_250bpfermikitraw_14321:HG2_Ill_150bpfermikitraw_13455;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13455:HG2_Ill_250bpfermikitraw_14321:HG2_Ill_GATKHCSBGrefine_7226:HG2_Ill_GATKHC_17142:HG2_Ill_Krunchall_14648:HG2_Ill_manta_3025:HG2_Ill_svaba_13276:HG2_PB_assemblyticsfalcon_28151:HG3_Ill_150bpfermikitraw_13496:HG3_Ill_250bpfermikitraw_13941:HG3_Ill_GATKHCSBGrefine_7135:HG3_Ill_GATKHC_17089:HG3_Ill_Krunchall_14370:HG3_Ill_manta_2481:HG3_Ill_svaba_13437;NumExactMatchSVs=15;ClusterMaxShiftDist=0.152381;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.247619;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=53;DistBack=16715;DistForward=52;DistMin=52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=9:125331767-125331819;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:1|0:6:24:27:7:./.:0:0:0:0:0/1:30:33:./.:.:.:.:.:.
chr9	125536128	HG2_Ill_scalpel_10132	G	GCAGCAACATGGAGGGAGGGAATACTACATAGCAGTGAAAAAGACTAAGATCATGTCCTTTT	20	PASS	ClusterIDs=HG2_PB_pbsv_10562:HG2_PB_PB10Xdip_30779:HG2_PB_HySA_19213:HG4_PB_HySA_15507:HG4_Ill_svaba_13367:HG4_PB_pbsv_10601:HG4_Ill_scalpel_9858:HG4_Ill_manta_2577:HG4_Ill_Krunchall_14925:HG4_Ill_GATKHC_17187:HG4_Ill_GATKHCSBGrefine_7373:HG4_Ill_250bpfermikitraw_14211:HG4_Ill_150bpfermikitraw_13612:HG3_Ill_svaba_13438:HG3_Ill_scalpel_10263:HG3_Ill_manta_2482:HG3_Ill_Krunchall_14371:HG3_Ill_GATKHC_17090:HG3_Ill_GATKHCSBGrefine_7136:HG3_Ill_250bpfermikitraw_13942:HG3_Ill_150bpfermikitraw_13497:HG2_PB_assemblyticsPBcR_27396:HG2_Ill_svaba_13277:HG2_Ill_scalpel_10132:HG2_Ill_manta_3026:HG2_Ill_Krunchall_14649:HG2_Ill_GATKHC_17143:HG2_Ill_GATKHCSBGrefine_7227:HG2_Ill_250bpfermikitraw_14322:HG2_Ill_150bpfermikitraw_13456:HG3_PB_HySA_15997:HG3_PB_assemblyticsfalcon_28067:HG4_PB_assemblyticsfalcon_27573:HG3_PB_pbsv_10301;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13456:HG2_Ill_250bpfermikitraw_14322:HG2_Ill_GATKHCSBGrefine_7227:HG2_Ill_GATKHC_17143:HG2_Ill_Krunchall_14649:HG2_Ill_manta_3026:HG2_Ill_scalpel_10132:HG2_Ill_svaba_13277:HG2_PB_assemblyticsPBcR_27396:HG3_Ill_150bpfermikitraw_13497:HG3_Ill_250bpfermikitraw_13942:HG3_Ill_GATKHCSBGrefine_7136:HG3_Ill_GATKHC_17090:HG3_Ill_Krunchall_14371:HG3_Ill_manta_2482:HG3_Ill_scalpel_10263:HG3_Ill_svaba_13438:HG4_Ill_150bpfermikitraw_13612:HG4_Ill_250bpfermikitraw_14211:HG4_Ill_GATKHCSBGrefine_7373:HG4_Ill_GATKHC_17187:HG4_Ill_Krunchall_14925:HG4_Ill_manta_2577:HG4_Ill_scalpel_9858:HG4_Ill_svaba_13367;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0634921;ClusterMaxEditDist=0.310078;PBcalls=10;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=61;DistBack=-1;DistForward=76585;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=61;REFWIDENED=9:125536085-125536145;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5734.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:0:19:3:16:./.:0:0:0:0:./.:4:67:./.:.:.:.:.:.
chr9	126564778	HG4_Ill_Krunchall_14935	T	TCCCACCACAATCTTCCCGATTTTACTATTCACACAGATGATCCTTCCAAATCCCTATAACTCTTGATTCCTAGGCCACTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7549:HG4_PB_pbsv_10607:HG2_PB_PB10Xdip_30781:HG4_PB_assemblyticsfalcon_27583:HG4_Ill_svaba_13380:HG4_Ill_manta_2578:HG4_Ill_Krunchall_14935:HG4_Ill_GATKHC_17200:HG4_Ill_GATKHCSBGrefine_7376:HG4_Ill_Cortex_3866:HG4_Ill_250bpfermikitraw_14219:HG4_Ill_150bpfermikitraw_13621:HG3_PB_assemblyticsfalcon_28078:HG3_Ill_svaba_13451:HG3_Ill_manta_2483:HG3_Ill_Spiral_11205:HG3_Ill_Krunchall_14380:HG3_Ill_GATKHCSBGrefine_7138:HG3_Ill_Cortex_3904:HG3_Ill_250bpfermikitraw_13950:HG3_Ill_150bpfermikitraw_13505:HG2_Ill_svaba_13291:HG2_Ill_manta_3028:HG2_Ill_SpiralSDKrefine_18145:HG2_Ill_Krunchall_14660:HG2_Ill_GATKHCSBGrefine_7230:HG2_Ill_Cortex_9445:HG2_Ill_250bpfermikitraw_14331:HG2_Ill_150bpfermikitraw_13465:HG2_Ill_breakscan11_4102:HG3_PB_pbsv_10304:HG2_PB_HySA_19222:HG3_PB_HySA_16005:HG2_PB_pbsv_10566:HG4_PB_SVrefine2PBcRDovetail_5324:HG4_Ill_SVrefine2DISCOVARDovetail_7679:HG3_PB_SVrefine2PBcRDovetail_4928:HG3_Ill_SVrefine2DISCOVARDovetail_7907:HG2_PB_SVrefine2PBcRplusDovetail_11751:HG2_PB_SVrefine2PB10Xhap12_7732:HG2_PB_SVrefine2Falcon2Bionano_5033:HG2_PB_SVrefine2Falcon1plusDovetail_12558:HG2_Ill_SVrefine2DISCOVARplusDovetail_13805;NumClusterSVs=43;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13465:HG2_Ill_250bpfermikitraw_14331:HG2_Ill_Cortex_9445:HG2_Ill_GATKHCSBGrefine_7230:HG2_Ill_Krunchall_14660:HG2_Ill_SpiralSDKrefine_18145:HG2_Ill_manta_3028:HG2_Ill_svaba_13291:HG3_Ill_150bpfermikitraw_13505:HG3_Ill_250bpfermikitraw_13950:HG3_Ill_Cortex_3904:HG3_Ill_GATKHCSBGrefine_7138:HG3_Ill_Krunchall_14380:HG3_Ill_Spiral_11205:HG3_Ill_manta_2483:HG3_Ill_svaba_13451:HG3_PB_assemblyticsfalcon_28078:HG4_Ill_150bpfermikitraw_13621:HG4_Ill_250bpfermikitraw_14219:HG4_Ill_Cortex_3866:HG4_Ill_GATKHCSBGrefine_7376:HG4_Ill_GATKHC_17200:HG4_Ill_Krunchall_14935:HG4_Ill_manta_2578:HG4_Ill_svaba_13380:HG4_PB_assemblyticsfalcon_27583;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0736196;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.263473;PBcalls=14;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=80;DistBack=-13;DistForward=28366;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=9:126564774-126564791;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5735.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:2:23:0:5:./.:0:0:0:0:1/1:0:22:./.:.:.:.:.:.
chr9	127207339	HG2_Ill_manta_3029	A	AATATATATAATTATAATATATAGTATATAATATATATAATATATTATAATTATATATAAATATATATAATATATAATATATTATATATATATAATATATATTATATATAAATAAATATAATATATAATATATAAATATATATAATATATTATATATAAATATATATAATATATAATATATAAATATATAATATATTATATATATAAATATATATAATATATTATATATATAAATATAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12560:HG3_PB_HySA_16010:HG4_PB_pbsv_10610:HG2_PB_PB10Xdip_30803:HG2_PB_pbsv_10568:HG4_Ill_MetaSV_5699:HG4_Ill_GATKHCSBGrefine_7380:HG3_Ill_manta_2484:HG3_Ill_MetaSV_5632:HG3_Ill_GATKHCSBGrefine_7140:HG2_Ill_manta_3029:HG2_Ill_SVrefine2DISCOVARplusDovetail_13810:HG2_Ill_MetaSV_5451:HG2_Ill_GATKHCSBGrefine_7231:HG2_PB_HySA_19228:HG4_PB_HySA_15517:HG2_Ill_breakscan11_4103:HG3_PB_pbsv_10306:HG2_PB_SVrefine2Falcon2Bionano_5035:HG4_PB_SVrefine2Falcon1Dovetail_6493:HG3_PB_SVrefine2Falcon1Dovetail_6399:HG4_PB_SVrefine2PBcRDovetail_5326:HG4_Ill_SVrefine2DISCOVARDovetail_7684:HG3_PB_SVrefine2PBcRDovetail_4930:HG3_Ill_SVrefine2DISCOVARDovetail_7911:HG2_PB_SVrefine2PBcRplusDovetail_11753:HG2_PB_SVrefine2PB10Xhap12_7734:HG2_Ill_SVrefine2DISCOVARplusDovetail_13809;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7231:HG2_Ill_MetaSV_5451:HG2_Ill_SVrefine2DISCOVARplusDovetail_13810:HG2_Ill_manta_3029:HG3_Ill_GATKHCSBGrefine_7140:HG3_Ill_MetaSV_5632:HG3_Ill_manta_2484:HG4_Ill_GATKHCSBGrefine_7380:HG4_Ill_MetaSV_5699;NumExactMatchSVs=9;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.228448;PBcalls=15;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=238;DistBack=-25;DistForward=2;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=104;REFWIDENED=9:127207263-127207366;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5736.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:./.:0:4:0:1:./.:0:0:0:0:1/1:0:22:./.:.:.:.:.:.
chr9	128027685	HG4_PB_SVrefine2Falcon1Dovetail_6494	G	GTTTCTTTTTCTGTTCTTCTTTCTGAGAGGGAGTCTTACTTGTCTCCCAGGCTGGAGTGCAGTGGTGTAATCTTGGCTCACTGAAACCTCTGCCTCCCGGGTTCCAGCGATTCTCCTGCCTCAGTCTCCCTCCTGGGCTGGGACTACAGGCGGGTGCCACGATGGCTGGCTAATTTTTGTATTTTTTTGTAGAGACGGGGTTTCACCATATTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCGGGGTTATAGACCGCACCCAGCTGCATTGTTTCTTAATTGCTCTCTTATTCAGTATGTTGAGGGCCACAAATTTGCTTCTGTCAAAATGAAAGCAAAGGAGCTCTAGAAAGGGGTATTGGTGCTAGAATTAACATTGAATTATAATCAGTATAACTGATTAGTAATCAAGGAAGTGAAAGCCAAAATAAGTGAAAATGCATCAGATTGAGATTTCAGATTGATAACAAATCTAATGTTTTTCACATCAGATTGATAAAAAAAATTTTCATGTCTGGGCTGGGTGCAGTGGCTTACGTCTGTAATCCCAGCACTTTGGGAGGCCGAGATGGGCGGATCACCTGAGGTTATGAGTTCGAGACCAGGCTGGCCAACATGGCAAAACCCCGTCTCTACTAAAAATAAAAAATTAGCTAGGTGTGGTGGTGCATGTCTGTAATCCCAGCTACTTGGGAGCTTGAGGCAGGAGAATCCCTTGAACCCGGGAGGTGGAGCTTGCGGTGAGCCGAGATCGCGCCACTGCACTCCAGCCGGGGCGACAGAGCCAGACTCCACCTCAAAAAAAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7735:HG4_PB_pbsv_10612:HG2_PB_pbsv_10569:HG3_PB_pbsv_10307:HG4_PB_HySA_15521:HG2_PB_PB10Xdip_30804:HG2_Ill_MetaSV_5452:HG3_Ill_MetaSV_5633:HG4_Ill_MetaSV_5700:HG4_Ill_GATKHCSBGrefine_7381:HG3_Ill_GATKHCSBGrefine_7141:HG2_Ill_GATKHCSBGrefine_7232:HG2_PB_SVrefine2Falcon1plusDovetail_12561:HG3_PB_SVrefine2PBcRDovetail_4931:HG2_Ill_SVrefine2DISCOVARplusDovetail_13813:HG2_PB_SVrefine2Falcon2Bionano_5036:HG3_PB_SVrefine2Falcon1Dovetail_6400:HG4_PB_SVrefine2PBcRDovetail_5327:HG4_PB_SVrefine2Falcon1Dovetail_6494:HG4_Ill_SVrefine2DISCOVARDovetail_7688:HG3_Ill_SVrefine2DISCOVARDovetail_7913:HG2_PB_SVrefine2PBcRplusDovetail_11754;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7735:HG4_PB_SVrefine2PBcRDovetail_5327:HG4_PB_SVrefine2Falcon1Dovetail_6494:HG4_Ill_SVrefine2DISCOVARDovetail_7688:HG3_Ill_SVrefine2DISCOVARDovetail_7913:HG2_PB_SVrefine2PBcRplusDovetail_11754;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0445748;ClusterMaxSizeDiff=0.0386643;ClusterMaxEditDist=0.179517;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=836;DistBack=1695;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=275;REFWIDENED=9:128027686-128027960;PctSeqSimilarity=0.9761;PctSizeSimilarity=0.9964;PctRecOverlap=0.7247;SizeDiff=-3;StartDistance=-230;EndDistance=-230;GTMatch=0;TruScore=89;MatchId=5737.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:1:27:1:19:./.:0:0:0:0:1/1:0:11:0/1:12:95:.:.:.
chr9	128055897	HG3_Ill_svaba_13459	T	TTTATATATATTATATATATATAATATAAAAATATATATATTATATATATATAATATAAAAATATATATA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13473:HG3_PB_pbsv_10308:HG2_PB_pbsv_10570:HG3_Ill_svaba_13459:HG3_Ill_Krunchall_14391:HG3_Ill_GATKHC_17114:HG3_Ill_GATKHCSBGrefine_7142:HG3_Ill_250bpfermikitraw_13960:HG2_Ill_svaba_13297:HG2_Ill_manta_3030:HG2_Ill_Krunchall_14669:HG2_Ill_GATKHC_17167:HG2_Ill_GATKHCSBGrefine_7233:HG2_Ill_250bpfermikitraw_14340;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13473:HG3_Ill_svaba_13459:HG3_Ill_Krunchall_14391:HG3_Ill_GATKHC_17114:HG3_Ill_GATKHCSBGrefine_7142:HG3_Ill_250bpfermikitraw_13960:HG2_Ill_svaba_13297:HG2_Ill_manta_3030:HG2_Ill_Krunchall_14669:HG2_Ill_GATKHC_17167:HG2_Ill_GATKHCSBGrefine_7233:HG2_Ill_250bpfermikitraw_14340;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.179104;PBcalls=2;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=23784;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=50;REFWIDENED=9:128055896-128055948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5738.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:28:0|1:32:6:3:22:./.:0:0:0:0:0/1:16:16:./.:.:.:.:.:.
chr9	128221162	HG2_PB_SVrefine2Falcon2Bionano_5037	G	GCCGGGCGGGGTGCTGACCCCCCCACCTCCCTCCCGGACGGGGCAGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCAGATGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGCGGGGTGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCAGGCGGGGGGCTGACGCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCTGGCGGGGGACTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6401:HG3_PB_assemblyticsfalcon_28089:HG2_PB_pbsv_10571:HG4_PB_assemblyticsfalcon_27591:HG4_PB_pbsv_10613:HG2_PB_PB10Xdip_30805:HG2_PB_assemblyticsPBcR_27415:HG3_PB_pbsv_10309:HG2_PB_SVrefine2PB10Xhap12_7736:HG2_PB_SVrefine2PBcRplusDovetail_11755:HG2_PB_SVrefine2Falcon2Bionano_5037:HG3_PB_SVrefine2PBcRDovetail_4932:HG4_PB_SVrefine2PBcRDovetail_5328:HG2_PB_SVrefine2Falcon1plusDovetail_12562:HG4_PB_SVrefine2Falcon1Dovetail_6495;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5037:HG2_PB_SVrefine2PBcRplusDovetail_11755;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0790419;ClusterMaxSizeDiff=0.0790419;ClusterMaxEditDist=0.246002;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=432;DistBack=67449;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=9:128221163-128221172;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9977;PctRecOverlap=0.9885;SizeDiff=-1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=5739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:1/1:4:34:0:27:./.:0:0:0:0:1/1:0:23:1/1:2:60:.:.:.
chr9	128576165	HG3_PB_SVrefine2PBcRDovetail_4935	C	CGGGCACGGTGGCTCATACCTGTAATCCCAAAACTTTGGGAGGCCAAAATGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCTGTATCTATTAAAAATAAAAAATTAGTTGGGCATGGTGGGCACCTGTAGTCCCAGCAACCTGGGATGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATGGCGCCACCACACTCCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAACCCAAACAGAAAAACAACAAACCCACATATGTATGTAGTACACACACACATTCGGAAACACATTTAAATCTATACCTTTTTATCTACCTTGAAAACCATGAATCCATCTTAACATTTCAAAGTTCATTCTGATTTTCTCCTGTTTCATATTTGTAACTGCAATAGTCCTCCCTTACCTGTGTTTTCACTTTCCATGATTTCGGTTACCTATGGTCAATGGCAGTCTGAAAACATTAAGATATATTGGACACAAAGAGAGAGATCACGAATTCATATAACTTTTATTACAGTATATTGTTATAATTATTTTACTTTGTTATTATTGTTGTTAATCTCTTACTGTGCCTAATTTATAAATTAGCCCTTGTCATAGATTATGTATATATAGGAAAAAAACATAGGATAATAAGGGTTCAGTACTATATGCAGTTTCAGGCATCCTCTGGGAGGTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAAACTCCGCCTCCTGGGTTCATGCCATTCTCCTGCCTCAGCATCCCCAGTAGCTGGGACTACAGGCGCCTACCACCATGCCTGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCTATCTCCTGACCTTGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCCCTTCTGGGAGTTTTAGAACAGATCACCCACAGATAAGGGGGGCTGCTGCACCTTCTTTGATAGTGAGAAACCTGGCTGTTATTAACTCAATTCAGGCATACCTTGTTTTACATTGTGCTTCCCTTTATTGCACTTTGCAGAAACTGTGTTTTTTTCACAAATTGAAGGTTTATGCTAACCCTGCATTGAGCAAGTCTGTTGTTGCCATTTTTCCAACAGCTTGTGCTCACTTTTTGTCTCTGTGTCACATTTTGGTGATTCTCATAATACCTCACACTTTTTCACTACTATTATATCTGTTATGGTGATGTGTGATTGGTGATCTTTGATGTTACTATTGTAATTGTTTTGGGGTGCTGCTAACTGTACCCACATTAGATGGTGAACTTAATTGATGAATGTTGTGAGTGTTCTGACTGCTCCACTGCTATTCCCTGTCTCTCTCCCTCTCCTTGGGCCTCCCTATTCCCTGAGATACAACAATATTGAAATTAGGTCAATTAATAACACTACAATGGACTCTTCATCTCCAATTGAAAGGAAGAGTCTGAAGTCTCTCACTTTAATTCAAAAGCTAGAAATGATGAAGCTTAGTGAGGAAGGCATGTCAAAAGCTATGATAGGGTCCTGCATGGTGGTTCACTCCTGAAATCCCAGTGCATTGGGAGGCCCCAGCAGGTGGATTGCTTGAAACCAGAGCTTGGAGACCAGCCTGGGCAAAAGGATGAAACCCTGTCTCTACAAAAAAAAAAATACAAAAAATTAGTCAGCCATGGTGGCACGTGCCTGTAGCCCCAGCTACTTGGCAGGCTGAGGTGGGAGGATCACCTGAGCCTGGGAGGTTGAGGCTGCGGTGAGCTGTGATCACACTGCTGCACTCCAGCCTGGGTGACAGAGTGAGACCCTGTCTTAAAAGAAAAAATGCTGAGATAGTCCAAAAGCTAAACCTCTTGGGTCAGTTAGCCAAGTAGTGAATGCAAAGGAAGAGTTAAGGAAACTAAAAATGCTACTCCAGTAAATACACAAATGTTAAGAAAGTGAAACGGTCTTATTGTTGATATGGAGAATGTTTTAGTGCTGTGGGTAAAAGACCAAGCCAGAAACAACATTCCCTTAAGTCAAAGCCTAATCCAGAGCAAGGCTCAAATTCTCTTCAATTCTATGAAGGATGAGGAGGCAAGGAAACCACAGAAGAAAAGTTTGAAGCTAGCAGAGGTTGGTTCATGAGCTTTAAGGAAAGAAGCCATCTCCATAATGTAAAAGTGCAAGGTGAAGCAGCGAGTGCTGATGTAGAAGCTGCAGCGTTATCTTAGCTAGATCTTCTGAATAAAGCTGCAGCTTCTACATCAACACTTGCTGCTTCACCTTGCACTTTTACATTATGGAGATGGCTTCTTTCCTTAAAGCTCATGAACCAACCTCTGCTAGCTTCAAACTTTTCTTCTGTAGTTTCCTTGCCTCCCTCATCCTTCATAGAGAAGATCTAGCTAAGATAATTTAAGATAACTACAGTAAAAAAACAGATTTTTCAGTGTAGTTGAAATAGCATTCTATTTGAAGAAGATGCCATCTAGGACTCTCACAGCTCAGGAGGAGAAGTCAATGCCTGGCTTCAAAGTTTCAAAGAACAGGCTGACTCTCTTGTTAGGGGGTAATGCAGCTGGAGACATTTTTGGAAAATCATTTTGCAGTTATAGTAAAGATTGGGTTAGGCAAGAACCATGAACAAATTCTAAATTGGGGGGAAATTTTGATTAGTAGTAGTTTGTGTGGTCTTAAATAAAATGTCTTACCAGAGATTGCTTATTAGTGGGAAGGGAAAAAAGTAACAGTGCTAGTACAGTGGACAAATTGGACAATACCTTGACCAAGCGATCAAGTTAATAGCGCCAACAAGGGACAAATGGACATTTGGTGCCTCCAGATGTGGTATCCTGAGAAGATCACAGCATTACATTTGTGTCACTGAGAAGTCAGAATCAGAATCTTATCATGAAGAAACGCAGACAAAATTAAAATTAGGCACATTGTAATTTAAAAAAGAGCAGGGGGAGTTTGTTCTTCAAAATGTCAATGCTGTAACTGTTCTGGAAATGTTGCAGATTAAAGGCACCTAAAGAGATTGACAACTAAATACAATATCTGATCCTAAACTGGATCCTAAACTGGAAAGGTTAAAATGCTGGGACATATTGGGTCATCTGACAAAACTGGAGTACAAACAGTAGATTAAAGTATTATATCATGTTAAATTTACTGAGGTTGATAACTGTGCTATGATCATGGAAAAGAATATCACGTTTTAAGGATATGCTGAAGTGGTTGGGGAAAACGGCTATGATTTATGTAACTACTCTCAAATGGCTCAGACAAGAAATTATCTGTGCGCGCGCACACACACACACACACACACACACACACACACCCATTTGTGTATGTTTGATAGGTAAAGTGTTGACAATAGGTAAATATTGATAGGTGAATCTCTGGTAAAGTGTGTATGGGTGCTTTTTGTCCTATTTTTATTTTTGCTTTTTAAAAAATAAATTTGAAATTATTGAAACAAAAGCATAGCCTCACTCAATATCCTCTCTTCTCACTTCTTTCTCCCTTTGCCAAGTAACCTTTAGGCCTCATCTACACTATTGCAGTAGCCTCCTAACTGATCTCTGTTCCTGACCTTGTTGCCCTACAGTCATTTTGTCATACAACTGGCAAAGTAATTCTTTTAAAACATAAAGTCAGATGATGTCACTCTTCTCATGGCTTCCCATTTCATCTGAAATAAAAATTGAGCCCTTAACTGGGGTCTTCAAGGCCTGACTGCTTTAGTTCACTTCATCTTCTGTGATATTACCCCTTCCCCCATCACTCTGTGCCACTCATTTCACTCCAGCCTAATGGGCCTCTTTGTGTTCCTCCAGTAGGCAAAGTGTACTCTCCTTTCAGGGACTTTGTTCTTGCTTTTCTTTCTTTCTGCCTGGAACACTCATATGTCTGAATGGCTTCCTCCCACCCTCTGGCTTCTGCCCAAATTTATCATCAGAAGGACTACTCCTGACCTTCCTAGATAAAACAGCATTCCTCCTCCCGCTTCCCATTACACCCTGTCCCCTTTTCCTGCTTTATTTCTATTTCTGTTCTATATGCTGTATTTGTTTATTGTTGATTTCCCTTTTACAATGTGAGTTCCTTGAGTGAGGGACCTTGTTTCGTTCACTGCTATATCCACAGTGCATAGAACAGTGCCTGGCACATAGTAGGCTTTCAGTAAATGCTTGAGAATGAAAGAATATTTAAGCTTGAGGCACTTAAAAGCTGACTAAAAATTCAGTTATGTGAGTAGAGTAGTCTTCTTGGGTTTGGTAGTCTTCACTGTAGGGTGATGGGTACAGGGACCTAGTGGTTTGGTATGCAACAGGTCTTTATCCCTTATCCAAGTCAGTTAAGGTATTCACCAATTTCCTAGCTAGAAAGTCAGGGAGAAGGTTGGGGAGGTGTGTAAGCCTGCTTCCTAATGTTCTGGAAGCAAAGTGGTGCTCTTGTCTGTTCTCATGTTTTTTGTTCTTGCAGATTTTATGTTCTCCCCACCACCCCCTGTTGTCTTTGTAGTAGAGTTTCAACAAGGCATGGAGGCAAACAGGTGTGTTCATTTTACTAATCCAGTTGGCTCTTTTAATAGAGGTTAACCTTTCTTATACCACAACCAAGAAGACTCCTGCTTGATCCTGTGTGAAAGCAGGAAACTACAATTGACTTGGAAACCGAGAGTTTTGCTTCTATTAACCCATGCCTGTCAACCGAAAGGAGAACTCAAATGAGAGTGTCTTAGCAGCCACATGTGAATATTGAGCACTTAAAATGGGCTTGTTTCAATTGAAATGTGTTACAAGTGTAAAATACATACTTTTTAAACACATAGTAGGTGTAAAAGACTTGGAAGTTTTTGAAGTCTGAAAAAAAATGTAAAATATTTCATTAATAATCCTTTAAAGTATTGGCTGTATGTTGAAATAATATTTTGAATATATTGAACTTAATTTTGTGTTTCCTTTTGCTTTTCAAAATTTGGTTAGTAGAAATTTAGATTTATATATATAGCATGCATTAATTCTTTTGGATAACATTGCTGTGGAGGTCAACAACTAAGGCAAGTGTGTCTATCAGTAGTGGTCCTGGATCCTAGAATTCCATTAAAGTATCCTAGGATCAGCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6404:HG2_PB_pbsv_10577:HG2_Ill_breakscan11_4104:HG4_PB_pbsv_10617:HG2_PB_SVrefine2PBcRplusDovetail_11759:HG2_PB_assemblyticsPBcR_27421:HG3_PB_assemblyticsfalcon_28094:HG4_PB_assemblyticsfalcon_27596:HG2_PB_SVrefine2Falcon1plusDovetail_12566:HG4_PB_SVrefine2PBcRDovetail_5331:HG4_PB_SVrefine2Falcon1Dovetail_6496:HG4_Ill_SVrefine2DISCOVARDovetail_7690:HG3_PB_SVrefine2PBcRDovetail_4935:HG2_Ill_SVrefine2DISCOVARplusDovetail_13814:HG3_Ill_SVrefine2DISCOVARDovetail_7915:HG2_PB_SVrefine2Falcon2Bionano_5040;NumClusterSVs=16;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_4935;NumExactMatchSVs=1;ClusterMaxShiftDist=0.161408;ClusterMaxSizeDiff=0.161408;ClusterMaxEditDist=0.283892;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=5257;DistBack=8972;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=293;REFWIDENED=9:128576166-128576458;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9987;PctRecOverlap=0.9728;SizeDiff=-7;StartDistance=-139;EndDistance=-139;GTMatch=0;TruScore=98;MatchId=5741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:1/1:0:25:0:36:./.:0:0:0:0:1/1:0:37:1/1:0:640:.:5028:.
chr9	128747447	HG3_Ill_MetaSV_5634	C	CCACCACCATCACCAACTTCACCACCACCATCATCCTCACTATCACCACCTACTTCTGTCACCACCACCACCATCACCATCACCACCACCGCCACCACCAGCACCATCACCATCACCCCATCAACACCATCACCACTATCATCATTACCATCATCATCATCACCATCACCACTATCATCATTACCATCATCATAATCACCATCACCACCATCACCATCATCGCCACTATCACCACCATCACCATCATCACCACTACCACCACCATCACTATCATCATTATCCTCACTACTATCATCACCATCACCATCGCCACCACCATCACCATCACCACTATCATCATTACCATCATCATCACCAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6497:HG3_PB_pbsv_10316:HG4_PB_pbsv_10618:HG2_PB_pbsv_10578:HG4_Ill_MetaSV_5701:HG4_Ill_GATKHCSBGrefine_7382:HG3_Ill_manta_2485:HG3_Ill_MetaSV_5634:HG3_Ill_GATKHCSBGrefine_7143:HG2_Ill_manta_3031:HG2_Ill_MetaSV_5454:HG2_Ill_GATKHCSBGrefine_7234:HG2_Ill_breakscan11_4105:HG2_PB_HySA_19232:HG2_PB_PB10Xdip_30807:HG4_PB_SVrefine2PBcRDovetail_5332:HG4_Ill_SVrefine2DISCOVARDovetail_7693:HG3_Ill_SVrefine2DISCOVARDovetail_7916:HG2_PB_SVrefine2PBcRplusDovetail_11760:HG2_PB_SVrefine2PB10Xhap12_7739:HG2_PB_SVrefine2Falcon2Bionano_5041:HG2_Ill_SVrefine2DISCOVARplusDovetail_13815:HG3_PB_SVrefine2PBcRDovetail_4936:HG2_PB_SVrefine2Falcon1plusDovetail_12567:HG3_PB_SVrefine2Falcon1Dovetail_6405;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7234:HG2_Ill_MetaSV_5454:HG2_Ill_manta_3031:HG3_Ill_GATKHCSBGrefine_7143:HG3_Ill_MetaSV_5634:HG3_Ill_manta_2485:HG4_Ill_GATKHCSBGrefine_7382:HG4_Ill_MetaSV_5701;NumExactMatchSVs=8;ClusterMaxShiftDist=0.057377;ClusterMaxSizeDiff=0.0518417;ClusterMaxEditDist=0.195973;PBcalls=13;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=357;DistBack=-286;DistForward=-1;DistMin=-286;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=110;REFWIDENED=9:128747372-128747481;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5742.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:1:22:1:24:./.:0:0:0:0:1/1:1:20:1/1:1:53:.:.:.
chr9	128827807	HG2_PB_SVrefine2PB10Xhap12_7740	T	TCCCTTCCTCCTTTTCCTCCCCCTCCCTCCCTCCCTCCGTTCCTCCCCCCTCCCTCCCTCCTTTCCCTCCCCCTCCCTCCCTCCTTTCCCTCCCTCTCTTTTTCTCCCTCTTTTCCCTCCCCCTCCCTCCCACCCTCCTTTCCCTCCCCCTCCCTCCCACCCTCCTTTCCCTCCCCCTCCCTCCCACCCTCCTTTCCCTCCCCTCCCTC	10	PASS	ClusterIDs=HG4_PB_pbsv_10621:HG2_PB_PB10Xdip_30808:HG2_PB_pbsv_10580:HG3_PB_HySA_16021:HG2_PB_HySA_19233:HG3_PB_pbsv_10318:HG4_PB_SVrefine2Falcon1Dovetail_6498:HG3_PB_SVrefine2Falcon1Dovetail_6407:HG2_PB_SVrefine2Falcon1plusDovetail_12568:HG3_PB_SVrefine2PBcRDovetail_4938:HG2_PB_SVrefine2PBcRplusDovetail_11762:HG2_PB_SVrefine2PB10Xhap12_7740:HG2_PB_SVrefine2Falcon2Bionano_5042;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5042:HG2_PB_SVrefine2PB10Xhap12_7740:HG2_PB_SVrefine2PBcRplusDovetail_11762:HG3_PB_SVrefine2PBcRDovetail_4938;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0592593;ClusterMaxSizeDiff=0.0591133;ClusterMaxEditDist=0.217284;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=208;DistBack=13;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=84;REFWIDENED=9:128827808-128827891;PctSeqSimilarity=0.9977;PctSizeSimilarity=1;PctRecOverlap=0.9761;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=5743.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:1/1:0:29:2:22:./.:0:0:0:0:1/1:0:10:./.:.:.:.:.:.
chr9	129993334	HG2_Ill_GATKHCSBGrefine_7238	T	TATATATACACATATGTGTATATATACATATATGTATATATACATATATATATATATATATATATA	20	PASS	ClusterIDs=HG3_PB_HySA_16029:HG3_Ill_scalpel_10289:HG3_Ill_GATKHC_17133:HG3_Ill_GATKHCSBGrefine_7149:HG2_Ill_GATKHC_17189:HG2_Ill_GATKHCSBGrefine_7238:HG2_PB_assemblyticsfalcon_28190:HG2_Ill_scalpel_10151;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7238:HG2_Ill_GATKHC_17189:HG3_Ill_GATKHCSBGrefine_7149:HG3_Ill_GATKHC_17133;NumExactMatchSVs=4;ClusterMaxShiftDist=0.149254;ClusterMaxSizeDiff=0.144928;ClusterMaxEditDist=0.223881;PBcalls=2;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=3;DistForward=160459;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=9:129993333-129993335;PctSeqSimilarity=0.9375;PctSizeSimilarity=0.8904;PctRecOverlap=0.8904;SizeDiff=-8;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=90;MatchId=5744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:./.:5:5:26:28:./.:0:0:0:0:0/1:2:17:./.:.:.:.:.:.
chr9	130170512	HG3_PB_SVrefine2Falcon1Dovetail_6413	C	CCACTGTACTCCAGCCTGGGAGACAGAACAAGACCCCAACCCCACCCCCGCAAAAAAAAAAAAAAAAAAAAAAAAAATTTCAGTTCTATCTTGAAAGATCTCACTTCCAACACACATGCTGTCTAGCAACACTAAGTAGAGGGGACCATTCTTCCCAACTCACGGCTGCTTTGTCCACTTCCCAGACCTGCAGCCCCAGCACCTGCCCACCTTGGCATCTCCCATTAAGTCACATAATGAGGGCAGAGAGCAGGGGCCTGTTTTTGCGGACACTTGAAGTACAGCATGGACCAGGCAGAGCAAGGCGCCGGATCAGATCAGTTCCAGAAGATATGCAGCAGCTGCTCTGATTTCAGTGAAATGTGTGAAACCATGCACAGGACTTTGGACAACTCTCAGCTGTAGCAAATCCAGTTTCCCCTTGGGCCTTCCAGAAGCAGGGTCCTGTCTCCGCGCAGGAGCATCTCCCGTGGCAATGGCT	20	PASS	ClusterIDs=HG3_PB_pbsv_10328:HG2_PB_pbsv_10586:HG4_PB_pbsv_10629:HG3_Ill_MetaSV_5640:HG2_Ill_MetaSV_5458:HG4_Ill_MetaSV_5703:HG3_PB_assemblyticsfalcon_28116:HG3_PB_SVrefine2Falcon1Dovetail_6413:HG2_Ill_SVrefine2DISCOVARplusDovetail_13822:HG4_PB_assemblyticsfalcon_27616:HG4_PB_SVrefine2Falcon1Dovetail_6503:HG3_Ill_SVrefine2DISCOVARDovetail_7924:HG2_10X_SVrefine210Xhap12_7563:HG2_PB_assemblyticsfalcon_28193:HG2_PB_SVrefine2Falcon2Bionano_5046:HG3_Ill_Spiral_11227:HG4_Ill_Spiral_878:HG2_Ill_Spiral_749:HG2_Ill_breakscan11_4106:HG2_PB_PB10Xdip_30827:HG4_PB_SVrefine2PBcRDovetail_5337:HG3_PB_SVrefine2PBcRDovetail_4943:HG2_PB_SVrefine2Falcon1plusDovetail_12572:HG2_PB_SVrefine2PBcRplusDovetail_11765:HG2_PB_SVrefine2PB10Xhap12_7743;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13822:HG3_PB_SVrefine2Falcon1Dovetail_6413:HG3_PB_assemblyticsfalcon_28116:HG4_Ill_MetaSV_5703;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0607287;ClusterMaxSizeDiff=0.0607287;ClusterMaxEditDist=0.2002;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=480;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=9:130170513-130170512;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9959;PctRecOverlap=0.9959;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:1/1:0:9:0:24:./.:0:0:0:0:1/1:0:17:1/1:2:43:.:.:.
chr9	130644845	HG2_Ill_SVrefine2DISCOVARplusDovetail_13825	G	GGAAAGGAAAGAAGGGAAAGGAAGGGAAGGGAAGCGGGGGGAGGGGAGGAGAGGGGAGGGAAGGGGAGAGGGGGAGGGGAAGAAGGGGAGGGGAAGAAGGGGAAGGGAAGAAGGGAAGAAGGGAAGGGAAGAGGGAAGGGAAGAGGGGAAGGGAACAAGGGAAGGAAAGAAGGGAAGGGAAGAAGGGAAGGGAAGGAAAGGGAAGGGAAGAGGGCGAGGGAAGGGAAGGAAAGAGGGGGAGGGAAGGGGGAAGAGAGGGAGGGAAGAGGGGAAGGGAAAAAAGGAAGAGAAGAAGGGAAGGGAAGAAGGAAAGAAGGGAAGGGAAGAAAGGAAGGGAAGAAGGGAAGGGAAGGAGGGAAGGGAAGGGAAGAAAGGAAGGGAAGAGAA	20	PASS	ClusterIDs=HG4_PB_pbsv_10632:HG2_PB_HySA_19252:HG2_PB_PB10Xdip_30828:HG2_PB_assemblyticsfalcon_28197:HG3_PB_assemblyticsfalcon_28121:HG4_PB_assemblyticsfalcon_27619:HG4_PB_SVrefine2Falcon1Dovetail_6505:HG4_PB_HySA_15544:HG2_PB_HySA_19251:HG2_Ill_MetaSV_5460:HG4_Ill_MetaSV_5704:HG2_PB_SVrefine2PB10Xhap12_7744:HG4_PB_SVrefine2PBcRDovetail_5339:HG4_Ill_SVrefine2DISCOVARDovetail_7705:HG4_Ill_GATKHCSBGrefine_7387:HG3_Ill_manta_2487:HG3_Ill_SVrefine2DISCOVARDovetail_7926:HG3_Ill_MetaSV_5641:HG3_Ill_GATKHCSBGrefine_7152:HG2_PB_SVrefine2PBcRplusDovetail_11767:HG2_PB_SVrefine2Falcon2Bionano_5048:HG2_Ill_SVrefine2DISCOVARplusDovetail_13825:HG2_10X_SVrefine210Xhap12_7567:HG2_PB_SVrefine2Falcon1plusDovetail_12574:HG3_PB_SVrefine2PBcRDovetail_4944:HG3_PB_SVrefine2Falcon1Dovetail_6415:HG2_PB_pbsv_10589:HG3_PB_pbsv_10331;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7567:HG2_Ill_SVrefine2DISCOVARplusDovetail_13825:HG2_PB_SVrefine2Falcon2Bionano_5048:HG2_PB_SVrefine2PBcRplusDovetail_11767:HG3_Ill_GATKHCSBGrefine_7152:HG3_Ill_MetaSV_5641:HG3_Ill_SVrefine2DISCOVARDovetail_7926:HG3_Ill_manta_2487:HG4_Ill_GATKHCSBGrefine_7387:HG4_Ill_SVrefine2DISCOVARDovetail_7705:HG4_PB_SVrefine2PBcRDovetail_5339;NumExactMatchSVs=11;ClusterMaxShiftDist=0.206327;ClusterMaxSizeDiff=0.206327;ClusterMaxEditDist=0.261474;PBcalls=18;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=386;DistBack=16575;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=9:130644846-130644877;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5747.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:./.:0:4:0:1:./.:0:0:0:0:1/1:0:16:./.:3:35:.:.:.
chr9	130817566	HG2_PB_SVrefine2Falcon2Bionano_5049	A	AAGAGAGAGAGGGAGAGAGAGGAAGGGGAGGGGAGGGGAGGGGGGAAGGGAGGGGAGGGGAGGGGGGAAGGGAGGGGAGGGGGAGGGGAGGGGGAGGGGAGGGAAAGGGAGAAAAAGGGAGGGGAAGGGAGGAGAAGGGAAGGGAGGGGAGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4945:HG2_PB_HySA_19254:HG2_PB_PB10Xdip_30829:HG4_PB_HySA_15546:HG4_PB_pbsv_10633:HG3_PB_assemblyticsfalcon_28124:HG3_PB_SVrefine2Falcon1Dovetail_6416:HG4_PB_assemblyticsfalcon_27622:HG4_PB_SVrefine2Falcon1Dovetail_6506:HG3_PB_HySA_16036:HG4_PB_SVrefine2PBcRDovetail_5340:HG2_PB_SVrefine2PB10Xhap12_7745:HG2_PB_SVrefine2Falcon2Bionano_5049:HG2_PB_SVrefine2PBcRplusDovetail_11768:HG3_PB_pbsv_10332:HG2_PB_SVrefine2Falcon1plusDovetail_12575;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5049:HG2_PB_SVrefine2PB10Xhap12_7745:HG4_PB_SVrefine2PBcRDovetail_5340;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0664452;ClusterMaxSizeDiff=0.0598007;ClusterMaxEditDist=0.317568;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=151;DistBack=6316;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=9:130817567-130807757;PctSeqSimilarity=0.9722;PctSizeSimilarity=0.9869;PctRecOverlap=0.6993;SizeDiff=-2;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=88;MatchId=5748.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:53:1/1:0:18:3:16:./.:0:0:0:0:./.:0:3:./.:.:.:.:.:.
chr9	131116037	HG2_PB_HySA_19262	A	ATATTTGAGATGGAGGCTCACTCTGTTGCCTGGGCTGGAGTGCAGTGGCGTGAGCTCGGCTCACTCTAACCTCTGCCTCCTGGGTTCAAGCAATTCTCTTTTTTTTTTTTTTTTTTTTTTTTT	10	PASS	ClusterIDs=HG4_PB_pbsv_10640:HG4_PB_HySA_15548:HG2_PB_HySA_19262:HG4_PB_SVrefine2PBcRDovetail_5342:HG2_PB_pbsv_10595;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_19262:HG4_PB_HySA_15548;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0708661;ClusterMaxSizeDiff=0.056;ClusterMaxEditDist=0.251969;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=122;DistBack=61748;DistForward=2758;DistMin=2758;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=9:131116038-131116038;PctSeqSimilarity=0.9837;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5749.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:28:0|1:39:3:0:23:./.:0:0:0:0:./.:19:1:./.:.:.:.:.:.
chr9	131795417	HG2_PB_PB10Xdip_30834	T	TAAGACAGGGTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGACGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_pbsv_10341:HG2_PB_assemblyticsPBcR_27459:HG2_PB_SVrefine2PBcRplusDovetail_11774:HG2_PB_HySA_19281:HG3_PB_assemblyticsfalcon_28137:HG2_PB_pbsv_10604:HG3_PB_HySA_16051:HG2_PB_SVrefine2PB10Xhap12_7753:HG2_PB_PB10Xdip_30834:HG3_PB_SVrefine2Falcon1Dovetail_6420:HG2_PB_SVrefine2Falcon2Bionano_5054;NumClusterSVs=11;ExactMatchIDs=HG2_PB_PB10Xdip_30834:HG2_PB_SVrefine2PB10Xhap12_7753;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0977099;ClusterMaxSizeDiff=0.0977099;ClusterMaxEditDist=0.175334;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=327;DistBack=1;DistForward=11620;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=9:131805192-131795429;PctSeqSimilarity=0.9894;PctSizeSimilarity=0.979;PctRecOverlap=0.9761;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=5750.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:12:29:0|1:12:1:0:28:./.:0:0:0:0:0/1:6:3:./.:2:16:.:.:.
chr9	132001378	HG2_Ill_GATKHCSBGrefine_7249	A	ATATTATATATTATATATAATAATATATTATATATTATATATAATAATATATTATATATTATATATAATAATATATTATATATTCTATATAATAATATATTATATAGAATATATAATATATTATTATATATAATATATAATATATAATATATAATATAT	10	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7249:HG4_Ill_GATKHC_17245:HG4_Ill_GATKHCSBGrefine_7396:HG3_Ill_GATKHC_17152:HG3_Ill_GATKHCSBGrefine_7165:HG2_Ill_GATKHC_17208;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7249:HG3_Ill_GATKHC_17152:HG3_Ill_GATKHCSBGrefine_7165:HG2_Ill_GATKHC_17208;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0125786;PBcalls=0;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=158;DistBack=13;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=141;REFWIDENED=9:132001336-132001476;PctSeqSimilarity=0.7308;PctSizeSimilarity=0.519;PctRecOverlap=0.522;SizeDiff=76;StartDistance=-22;EndDistance=-22;GTMatch=1;TruScore=59;MatchId=5751.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:14:./.:13:6:12:4:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr9	132276934	HG2_Ill_250bpfermikitraw_14373	G	GCTGCAGAGAGGAGCTACCCACTCCAGGGCCTCCTCTCTGCTGAGAGCTGCAGAGATGACGAGAGGACCAGC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7582:HG2_PB_pbsv_10609:HG3_PB_HySA_16061:HG4_PB_pbsv_10653:HG2_PB_HySA_19286:HG3_PB_pbsv_10347:HG4_PB_assemblyticsfalcon_27638:HG4_Ill_manta_2586:HG4_Ill_Krunchall_14975:HG4_Ill_GATKHC_17250:HG4_Ill_GATKHCSBGrefine_7398:HG4_Ill_250bpfermikitraw_14257:HG4_Ill_150bpfermikitraw_13661:HG3_Ill_manta_2492:HG3_Ill_Spiral_11241:HG3_Ill_Krunchall_14422:HG3_Ill_GATKHC_17158:HG3_Ill_GATKHCSBGrefine_7168:HG3_Ill_250bpfermikitraw_13988:HG2_PB_assemblyticsPBcR_27464:HG2_Ill_manta_3039:HG2_Ill_SpiralSDKrefine_18178:HG2_Ill_Krunchall_14698:HG2_Ill_GATKHC_17210:HG2_Ill_GATKHCSBGrefine_7251:HG2_Ill_250bpfermikitraw_14373:HG2_PB_PB10Xdip_30841:HG4_Ill_SVrefine2DISCOVARDovetail_7717:HG3_PB_SVrefine2Falcon1Dovetail_6424:HG2_PB_SVrefine2Falcon1plusDovetail_12586;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14373:HG2_Ill_GATKHCSBGrefine_7251:HG2_Ill_GATKHC_17210:HG2_Ill_Krunchall_14698:HG2_Ill_SpiralSDKrefine_18178:HG2_Ill_manta_3039:HG2_PB_assemblyticsPBcR_27464:HG3_Ill_250bpfermikitraw_13988:HG3_Ill_GATKHCSBGrefine_7168:HG3_Ill_GATKHC_17158:HG3_Ill_Krunchall_14422:HG3_Ill_Spiral_11241:HG3_Ill_manta_2492:HG4_Ill_150bpfermikitraw_13661:HG4_Ill_250bpfermikitraw_14257:HG4_Ill_GATKHCSBGrefine_7398:HG4_Ill_GATKHC_17250:HG4_Ill_Krunchall_14975:HG4_Ill_manta_2586:HG4_PB_assemblyticsfalcon_27638;NumExactMatchSVs=20;ClusterMaxShiftDist=0.107383;ClusterMaxSizeDiff=0.0939597;ClusterMaxEditDist=0.263158;PBcalls=10;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=71;DistBack=-36;DistForward=-1;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=9:132276931-132276970;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5752.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:41:1/1:1:27:0:20:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr9	132621534	HG2_PB_SVrefine2PBcRplusDovetail_11779	A	TTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTATTTTATTTTATTTATTTTATTATTTTTTTTAATTTTTTTAATTTTATTTTAATTTTATTTTATTTTAT	20	PASS	ClusterIDs=HG3_PB_HySA_16064:HG2_PB_assemblyticsPBcR_27465:HG3_PB_assemblyticsfalcon_28145:HG4_PB_assemblyticsfalcon_27640:HG4_Ill_SVrefine2DISCOVARDovetail_7718:HG4_PB_SVrefine2PBcRDovetail_5351:HG2_PB_SVrefine2PBcRplusDovetail_11779:HG2_Ill_SVrefine2DISCOVARplusDovetail_13839:HG3_Ill_Spiral_11243:HG3_Ill_SVrefine2DISCOVARDovetail_7938:HG2_PB_SVrefine2PB10Xhap12_7758:HG2_PB_SVrefine2Falcon1plusDovetail_12587:HG3_PB_SVrefine2PBcRDovetail_4951:HG2_PB_SVrefine2Falcon2Bionano_5059:HG3_PB_SVrefine2Falcon1Dovetail_6425:HG3_PB_pbsv_10349:HG4_Ill_GATKHCSBGrefine_7401:HG3_Ill_GATKHCSBGrefine_7169:HG2_Ill_GATKHC_17214:HG2_Ill_GATKHCSBGrefine_7252:HG2_PB_pbsv_10610:HG4_PB_pbsv_10656:HG2_PB_HySA_19288:HG4_Ill_MetaSV_5714:HG2_Ill_MetaSV_5468:HG4_PB_SVrefine2Falcon1Dovetail_6515;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13839:HG2_PB_SVrefine2PBcRplusDovetail_11779:HG4_Ill_SVrefine2DISCOVARDovetail_7718;NumExactMatchSVs=3;ClusterMaxShiftDist=0.225;ClusterMaxSizeDiff=0.216667;ClusterMaxEditDist=0.241667;PBcalls=16;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=126;DistBack=0;DistForward=10;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=34;REFWIDENED=9:132621535-132621568;PctSeqSimilarity=0.976;PctSizeSimilarity=0.9524;PctRecOverlap=0.9528;SizeDiff=6;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=96;MatchId=5753.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:1:16:2:28:./.:0:0:0:0:1/1:0:54:./.:.:.:.:.:.
chr9	133833972	HG2_PB_SVrefine2Falcon2Bionano_5063	T	TCATCACCACCACTACCATCACCACCAGCACCACCACCATCACCATCACCACCTCCAACACCACCACCACCACCACCACCATCACCACCATCACCACCACTGTCATCACCATCACCACCACCACCGCCATCACCACCACCACCACCACCGCCATCACCACCACCACCGCCATCACCATCACCACCACCACCACCACCACCACCATCACCATCACCATCACCAGAACCACCACCATCACCATCACCACAACCACCACCATCACCATCACCACCTCCAACACCACCACCACCACCACCACCATCACCACCATCACCACCACTGTCATCACCATCACCACCACCACCACCACCACCACTGCCATCACCACCACCACTGCCACCGCCATCACCACCACCACCGCCATCACCATCACCACCACCACCACCACCACCATCCCCATCACCATCACCAGAACCACCACCATCACCATCACCACAACCACCACCATCACCATCACCACCTCCAACACCACCACCACCACCACCACCATCACCACCATCACCACCACTGTCATCACCATCACCACCACCACCGCCATCACCACCACCACCACCACCGCCATCACCACCACCACCGCCATCACCACCACCACCGCCACCACCACCACCACCACCATCACCACCACCATCACCACCACCACCACCACTGCCATCACCACCACCACCGCCACCGCCATCACCACCACCACCGCCATCACCATCACCACCACCACCACCACCACCACCACCATCATCACCATCACCATCACCACAACCACCACCATCACCATCACCACCTCCAACACCACCACCACCACCACCACCATCACCACCATCACCACCACTGTCATCACCATCACCACCACCACCGCCATCACCACCACCACCGCCACCGCCATCACCACCACCACCGCCATCACCATCACCACCACCACCACCACCACCATCACCACCACCATCACCATCACCAGAACCACCACCATCACCATCACCACAACCACCACCATCACCGTCACCACCACCACCACCATCACCTCCACCACCACCATCACCATCACTACCATCACCACCACCATCACCACCACCACCATCACCACCACCATCACCGTCACCACCACCACCACCATCACCACCACCATCATCACCATCACCATCACAACCACCACCACCACCACCACCACCATCACCATCACCAACACCATCACCGTCACCACCACCATCACCACCACCATCATCACCATCACCATCACAACCACCACCACCACCATCACCATCACCACCACCACCACCATCACCGTCACCACCACCATCACCACCACCATCACCATCACCAGAACCACCACCATCACCATCACCACAACCACCACCACCACCATCACCATCACCACCACCATCACCGTCACCACCACCACCATCACCTCCACCACGACCATCACCATCACTACCATCACCACCACCATCACCACCACCACCATCACCATCACCACCACCATCACCGTCACCACCACCACCATCACAACCACCACCATCACCATCACCAGAACTGCCACAATCACCACCACCACAACCACCACCATCACCACCACCACCACCATCACCGTCACCACCACCACCACCACCATCACCAGAACCACCATCATCACCACCACCACCACCATCACCATCAACAGAACCACCACCACCACCATCACCACCATCACCACCACCACCGTCACCACCACCACCACCATCACCACCACCATCATCACCATCACCATCACCACAAACACCACCATCACCATCACCACCACCACCACCATCACCACCACCATCACCGTCACCACCACCACCACCATCACCATCACCATCACCACCACCACCACCACCACCACCATCACCACCACCACCACCATCACCACCACCATCACCGTCACCACCACCACCATCACCATCACCAGAACCACCATCATCACCACCACCACCACCATCACCATCACCAGAACCACCACCACCACCATCACCACCACCACCGTCACCACCACCACCATCACCACCACCATCATCACCATCACCATCACCACAAACACCACCATCACCATCACCACCACCACCACCATCACCACCACCATCACCGTCACCACCACCACCACCATCACCATCACCACCACCACCACCACCACCATCACCACCACCACCACCATCACCACCACCATCACTGTCACCACCACCACCATCACCATCACCAGAACCACCACCATCACCATCACCACAACCACCACCATCACCATCACCATCACCACCACCATCACCATCACCACCACCATCACCGTCACCACCACCATCACCTCCACCACCACCATCACCATCACTACCATCACCACCACCATCACCACCACCACCGTCACCATCACTACCACCATCACCGTCACCACCACCACCATCACCACCACCACCATCACCATCACCACAACCAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6521:HG2_PB_pbsv_10616:HG2_PB_PB10Xdip_30845:HG2_Ill_breakscan11_4109:HG2_PB_SVrefine2PBcRplusDovetail_11783:HG2_PB_SVrefine2PB10Xhap12_7762:HG2_PB_SVrefine2Falcon2Bionano_5063:HG2_PB_SVrefine2Falcon1plusDovetail_12591;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12591:HG2_PB_SVrefine2Falcon2Bionano_5063:HG2_PB_SVrefine2PB10Xhap12_7762:HG2_PB_SVrefine2PBcRplusDovetail_11783;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0393362;ClusterMaxSizeDiff=0.0348289;ClusterMaxEditDist=0.138906;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=2469;DistBack=-239;DistForward=-1;DistMin=-239;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=448;REFWIDENED=9:133833973-133834420;PctSeqSimilarity=0.991;PctSizeSimilarity=0.9988;PctRecOverlap=0.87;SizeDiff=3;StartDistance=-320;EndDistance=-320;GTMatch=0;TruScore=95;MatchId=5754.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:./.:0:1:0:1:./.:0:0:0:0:./.:1:0:1/1:0:393:.:3516:.
chr9	134234685	HG3_Ill_GATKHCSBGrefine_7171	A	ACCTGTGGTCCCAGCTACTCGGGAAGCTGAGGCAGGAGAATCACATGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGACTGCACCGCTGCACTCCAGCCTAGTGACAGAGCAAGACTCTGTCTCAAAAAAATAAATAAAAATAAATAAATATATAAAATAAAATAATTAGCTGAGTGTGGTGGCATGCACCTGTGGTCCCAGCTATAGGGGAGGCTGAGGCTGAGCTGAGATCGTGCCACGCCATTGCACTCCAGCCTGGGCAACAGAGTGAGACCTTGTCTCAAAAAAAAAAAAAAAAAAAACGTGCACTGTGACATGACCAAAGGACAAAGAAGTTTCACAACACCCCTCTAGCCCTTCATTGCCAGTCAGATGTCTGTGGTCATTGGTTACCTCCTCCCTCTTCTCCCTTCTGCTAACAGAAAAAGAGCCTAAAAAGTGATGTTAACTTAAGCTCGTTCTTTAGAACACCAGTCTGCCATCCTCTTGGTTTGCTGGCTTTCCAAATCAAGTCACTTTCCTTGCCCCAACACCTTGTCTCCTGACTTACTGGCCATCATGTGGCAATCTGTACGAGCTTTGGACTCAGTTACAGCTTAATGGCCCAAAGTGAGGCATGAGAGGCAGCACTGGCCCCAGCTATGGATAGATGTTGCTCTTTGGACAGGTGCCCCAAAGCCTTCACACTTGAGAAGCTTGAGCCACTGATGAGGAAAGATCAGGCAACCTGACCAGCCCAGGGAGCCATTTCCTAGCCTCTAACAGGCCATCCTGGGGACTCCTGCCCTTTCTGGGGCAGGTCTTGGAGGAAACCTTTGGCCATGTTAGTATCGTATATTGTACAACCCAGAAGAAAATACACTTGAAAGGGTGGGATAAAATAAATAGATATGGCTGAGCACTGTGGCTGACACCTATAATCCCAGCACTTTCAGATGTCAAAGTGGGAGGATCATTTGAGCCCAGGAGTTTGAGACCAGCCTGGGGAGCATGGAGAGACCCTGTCTCTACAAAAATGTTAAAGTTAGCCAGGCCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGATGGGCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7764:HG3_PB_pbsv_10360:HG4_PB_pbsv_10666:HG2_PB_pbsv_10618:HG4_PB_HySA_15591:HG2_PB_PB10Xdip_30847:HG3_Ill_MetaSV_5649:HG3_Ill_GATKHCSBGrefine_7171:HG3_PB_HySA_16088:HG2_PB_SVrefine2Falcon1plusDovetail_12593:HG3_PB_SVrefine2PBcRDovetail_4956:HG3_Ill_SVrefine2DISCOVARDovetail_7943:HG3_PB_SVrefine2Falcon1Dovetail_6430:HG4_PB_SVrefine2PBcRDovetail_5358:HG4_Ill_SVrefine2DISCOVARDovetail_7731;NumClusterSVs=15;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_7171:HG3_Ill_MetaSV_5649;NumExactMatchSVs=2;ClusterMaxShiftDist=0.136875;ClusterMaxSizeDiff=0.134174;ClusterMaxEditDist=0.2026;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1139;DistBack=-151;DistForward=165;DistMin=-151;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=253;REFWIDENED=9:134234584-134234836;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9982;PctRecOverlap=0.9982;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5756.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:0|1:26:5:2:30:./.:0:0:0:0:0/1:28:12:0/1:39:91:.:1094:.
chr9	134245594	HG4_Ill_250bpfermikitraw_14276	C	CGGGGTTTTACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCACCTCAGCTT	20	PASS	ClusterIDs=HG2_PB_HySA_19319:HG2_PB_PB10Xdip_30848:HG2_PB_pbsv_10619:HG4_Ill_svaba_13450:HG3_PB_pbsv_10361:HG4_Ill_scalpel_9905:HG4_Ill_Krunchall_14995:HG4_Ill_GATKHC_17274:HG4_Ill_GATKHCSBGrefine_7406:HG4_Ill_250bpfermikitraw_14277:HG4_Ill_150bpfermikitraw_13684:HG3_Ill_svaba_13519:HG2_PB_assemblyticsPBcR_27488:HG2_Ill_svaba_13359:HG2_Ill_scalpel_10187:HG2_Ill_manta_3041:HG2_Ill_GATKHC_17232:HG2_Ill_GATKHCSBGrefine_7254:HG2_Ill_250bpfermikitraw_14391:HG2_Ill_150bpfermikitraw_13532:HG4_PB_pbsv_10667:HG4_PB_assemblyticsfalcon_27657:HG4_Ill_svaba_13449:HG4_Ill_GATKHC_17273:HG4_Ill_GATKHCSBGrefine_7405:HG4_Ill_250bpfermikitraw_14276:HG4_Ill_150bpfermikitraw_13683:HG3_PB_assemblyticsfalcon_28163:HG3_Ill_svaba_13518:HG3_Ill_scalpel_10329:HG3_Ill_Krunchall_14445:HG3_Ill_GATKHC_17181:HG3_Ill_GATKHCSBGrefine_7172:HG3_Ill_250bpfermikitraw_14009:HG3_Ill_150bpfermikitraw_13568:HG2_Ill_svaba_13358:HG2_Ill_MetaSV_5469:HG2_Ill_GATKHC_17231:HG2_Ill_GATKHCSBGrefine_7253:HG2_Ill_250bpfermikitraw_14390:HG2_Ill_150bpfermikitraw_13531:HG4_PB_HySA_15592;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13531:HG2_Ill_250bpfermikitraw_14390:HG2_Ill_GATKHCSBGrefine_7253:HG2_Ill_GATKHC_17231:HG2_Ill_MetaSV_5469:HG2_Ill_svaba_13358:HG3_Ill_150bpfermikitraw_13568:HG3_Ill_250bpfermikitraw_14009:HG3_Ill_GATKHCSBGrefine_7172:HG3_Ill_GATKHC_17181:HG3_Ill_Krunchall_14445:HG3_Ill_scalpel_10329:HG3_Ill_svaba_13518:HG3_PB_assemblyticsfalcon_28163:HG4_Ill_150bpfermikitraw_13683:HG4_Ill_250bpfermikitraw_14276:HG4_Ill_GATKHCSBGrefine_7405:HG4_Ill_GATKHC_17273:HG4_Ill_svaba_13449:HG4_PB_assemblyticsfalcon_27657;NumExactMatchSVs=20;ClusterMaxShiftDist=0.116788;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.335766;PBcalls=9;Illcalls=33;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=15;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=4269;DistForward=63;DistMin=63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=9:134245595-134245660;PctSeqSimilarity=0.9949;PctSizeSimilarity=1;PctRecOverlap=0.5373;SizeDiff=0;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=84;MatchId=5757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:37:1/1:0:20:2:21:./.:0:0:0:0:1/1:1:62:./.:.:.:.:.:.
chr9	134289812	HG4_PB_pbsv_10668	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTAAATTTTTTTTATTGATAATTCTTGGTGTTTTCTCTCACGAGAGGGGGATTTTGGGCAGGTGATCAATGGGAACAAATAGTGGGAGGGAAGGTCAGCAGAGTAAACAAAGTTGAACTAAAGGTCTCTGGTTTTCCTAAGGCAGAGGAACCCTGCGGCCGTTAGCCGCAGTGTTTGTGTTCCTGATTACGTTGAGATTAGGGATTGGTTGATGACTCTTAAAAACGAGCATGATCGTGCTGCCTTCAAAGCATCATGTTTAACAAAGCACATCTGGCGACCGCCCTTAATCGCATTAACCCCTGAGTGGACACAGCACAATGATTTCAGAGAGCACAGGGGTTGGGGTAAGGTCACAATCAAACAGGATTCCGCAAGGCAGAGGATAAATTTTTGTCTTTAGATGGCAGGAAACAAACATGAAAAGTCCTCGCCATGTCTACCTTCTTTTCTACACAAGACACGGCAACCATCACGATTTTGCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTTCCACAAAGGCCGCCATTGTCAATCACTGGCCCGTTCCTCAATGAGCTGTTGGGCACACCGTCCCAGACGGGGTGGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCAGGCTGGCAGAGGCGCGCCCTCACCTCCCGGACGGGGCGGCTGTGCCGGGCGAGGGGCTGACGCCCCCCCACCTCCTCCCTTGGACAGGGCGGACTGGCCCGGGCGGGGGGCTGACCCAACTCCCTCCGCGGACGGGGCGGCTGGCCCAGGGCGGTGGGGCTGACGCCGCCGACCGTCCCTCACCGGATGCGGGGCGGCTGAGCGGGCTAGAGGGGCTCCCTCACTTCCGGCAGTAGGGGGCGGCCAGGGCAGAGGCGCAGCCCTCACCTCAGCGCGGACGGGGCACGGGCTGGGCCGGATCGGGGGGCCGACCCCACCCACCTCCTCCCGGACGGGGGAGCGGCTTGGCCCGGGCGGGGGGCCGAACCCCGCCATCCTCCCGGACGGTGGCGGCTTGGCCGGGCGGGGGGCGCGACGCCCCGTGCCTCACACTCCCTCGCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCGCGGGCAAGAGGCGCCCTCACTCCGCGGAAGCAAGTGGCGGCTGGCTGGGCGGGGGGGCTGACCCCCCACCTCCCTCACCGGACGGGGGCGGCTTGGCGGAGTAGAGGGGCTCCTCACTATCCACAGTAGGGGCGGCCGAGCGAGGCGCCTCGCTTCACCTCCCGGAAACGGGGCGGCTGGCCGGGCAAGGGGGGCCGAGCGCCGCCCCCACCTCGCCTCCCGGAAGGGCGGCTGGCCGGGCGGGGGGCCGACTCCCCCACTGCTCCCTTTTCCCGGACGGGGGCGGCTGCCGGGGCGGGGGGCCGACCCCCCCACCATCCCTCTCCGGACGGGGCGGCCTGGCGCAGGGCAGAGGGGCTCCTCACTTTCCAGTAGGGGGCGGCCGGTGCAAAGAAGGACGCCCCTCATCCTCCCGGACAGGGCGAGACTGGCTGGGCGGGGGGAAAAGCTGGACCCCCCCAACCTGCCGCTCCCAGACGGGGGCGGCTGGCCGGGCGGGGGGGCTTGACGCCCCCACCTCCCTCGCCGGACGGGGCGGCTGGCAGGGCAGAGGGGTCCTCAACTTCCCGCAGTAGGGGCGGCGCGGGGCAGAGGGCCCCTCAACCTGCCCGGACAGGGGCGGCTGGCCGGGCAAGGGGGGCCGACCCCCCACCTGCCACTCCCGGACGGGGCGGCTGGCCGGCAGAGGTGGCTCCTTCACATTCCGGCTAGTAGGGGCGGCCGGGCAAGGATGGCGCCGCCTCACCTCCCGACGGGGCGGCTGGCCGGGCGAGGGCTGACGGCCCCCCACCATCCCTCCTCCGACAGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCGCCATCCGCTCTCCGGAGGGGCGGCCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGACTGGGCAGAGTGCGCCCCTACACCATCCAGACGGGGCGGCTGCCGGGCGGAGGGCTGACCCGCCCACCGTCGCCTCACCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCATACCTCCCTACGCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACACCCCCCATCTCCGCTCCCGGACGGGGTGGCCTGGCCGGGCCTGAGGGGCATCCTCACTTAACGCAGTAGGGGCGGCCGGGCAGAGGCGCGCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCACCTCCCTCCCCGAGGCAGGGGCGGCTGGCCGGGCCGGGGGGCTGACCCCCCCAACCTCCCTCCGGACGGGGCGGCTTGGCCCCGGTGCAGAGGGGCTCCTCACTTCCCATGTAGGAGGGCGGCTGGGAGCCAGAGGCCGCCCCTCACCTATCCAGACGGGGGCGGCTGGCGCGGGCGGAGGGCATGACCCCGCCCACCTGCCGCTCACCGGACGGGGGACGGCTTGGGCCAGGCGGGGGAGCTGACCGCCCTACCGTCCTAGCCCGGGACGGGGCGGCTGGCGGGTGGGTGGGGCTTGACGCCACCATCTCCCTCCCGGACGGGGTGAGCTGCCGGGCTGAGGGGTCTCCTCAACTTCCGCAAGTAGGAGGCGGCCGGGCATAGATGGCCGCCCCTGCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCACCCCACCTCCTCCGCGGATGGCAGAAGCGGCTGGCAGGGCGGGGGGCTGACCCCTCCGCACCTCCCTCCAGGAATGGCACGTGCTGGCCGGGGCGGGGGGGATGACCCCCAACCATCCCTCCCGGATGGGGCAGGCTGCCGGGGCGGGGCTTTGACCCCCCCGCCACTCTCCCTCCCGGGACGGGGTGGCTGCCAGGGCGGAGACGCTTCACTCACTTCCGCAGATGGGGTGGCTGCCGGGACGGAGAGCTCTCCACTTCTCAGAGGGGCAGCTGGCCCAGGGCGGAGGGCTCCTCCACTTCTCAAAGACGGGGTGGTTGCCAGGCAGAGGGTGCTCCTCACTTCTGCAGACGGTGGCGGCGGCAAGGAGACGGCTCCTCACCTTCCCAAGATCGGGGTCTCGGCCGGGCTAAGAGGCGCTCGCTACACATCCCAGATGGGGCGGCGGGGCAGTAGGAGCTCGCGACACATCTCAGAACGATGGGCGGCGGGAGAGACGCTCTCTCACTTTCCATAGAATTGTGATGGCGGCTGGGAAGAGGCGCTCCTTCACTTCACTTTAGATGGGATGGCGGCCGGGCGGAGAGACGCTCTCACTATTCCAGACTTGGGCAGCCAGGCAGAGAGGGGACTTCGCTCACATCCCAGTACGATGGGCGGCAGGCTAAGGACGCTCCTTCACTTCCCAGAAGACGGGGTGGCAGCCCGGGCAGAAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGCTCCTTGCCCTCGCGGCGCCCGGGCTGGGCCCGGTTCGCTTCTCCAGCCGCTGCCTCCCGTGGCGGGCGCTCTATCTTTTGCTTTTTT	10	PASS	ClusterIDs=HG2_PB_HySA_19320:HG4_PB_pbsv_10668:HG3_PB_pbsv_10362:HG4_PB_assemblyticsfalcon_27658:HG4_PB_HySA_15593;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_10668;NumExactMatchSVs=1;ClusterMaxShiftDist=0.10112;ClusterMaxSizeDiff=0.10112;ClusterMaxEditDist=0.197674;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=3649;DistBack=5402;DistForward=6026;DistMin=5402;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=9:134289813-134289812;PctSeqSimilarity=0.9369;PctSizeSimilarity=0.9197;PctRecOverlap=0.92;SizeDiff=293;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=92;MatchId=5758.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:17:./.:5:6:18:5:./.:0:0:0:0:0/1:30:5:0/1:167:45:.:3419:.
chr9	134839700	HG3_PB_SVrefine2Falcon1Dovetail_6434	G	GGTGCTGGTGGTGGAGGTGATGGTGGTGGTGGTGCTGGTGATGGTGGTGGTGATGGTGGTGGGGGTGGTGGTGGGGATGGAGGTGGTGATGGTGATGGTGGTGGTGGAGGTGCTGGTGGTAGAGGTTATGGTGGTGGTGGTGATGGTGGGGGTGGAGGTGGTGATAGTGGTGGTGGGGGTGGAGATGGTGATGGTAGTGGTGATGGTAGAGGTTATGGTGGTGGTGGTGATGGTGTTGGTAGAGGTGATGGTGATAGAGGTGATGGTGATGGTGGTGGTGGGGGTGATGGTGACAGGAGGTGGTGGCGATGATGGAAATGATGGTGGTAGTGAAGGTGATGGTGGTGGTGGTGATGGTAGTCGAGGTGATGGTGGTAGTGATGGTGGTGGTGGTGGAGGTGATGGTAGTGGAGGTGATGGTGGTGGAGATGATCATGATGGTGGTGGTGGTGATGGTGGAGGGTGTGGTGGTAGTGAAGGTGATGGTGGTGGTGGTAGAGGTGATGGTAATGGTGGAGGTGATGGTGGTGATGGTGGTAGTGAAAGTGATGGTGGTGATGGTGGAGGGTGTGGTGGTAGTGAAGGTGGTGGTGGTGGTGATGGCAGAGGGTGTGGTGGTAGTGAAGGTGATGGTGGTGGTGGTAGAGGTGATGGTAGAGGTGATGGTAATGGTGGAGGTGATGGTGGTGATGATGGTGGTAGTGAAAGTGATGGTGGTGATGGTTGAGGGT	20	PASS	ClusterIDs=HG3_PB_pbsv_10366:HG2_PB_PB10Xdip_30853:HG4_PB_pbsv_10672:HG2_PB_pbsv_10624:HG4_PB_HySA_15602:HG2_Ill_breakscan11_4110:HG2_PB_HySA_19329:HG4_Ill_MetaSV_5717:HG4_PB_HySA_15601:HG2_PB_HySA_19328:HG2_Ill_MetaSV_5472:HG2_PB_SVrefine2Falcon1plusDovetail_12596:HG3_PB_SVrefine2PBcRDovetail_4960:HG4_PB_SVrefine2PBcRDovetail_5361:HG3_PB_SVrefine2Falcon1Dovetail_6434:HG2_PB_SVrefine2PB10Xhap12_7767:HG4_PB_SVrefine2Falcon1Dovetail_6525:HG2_PB_SVrefine2PBcRplusDovetail_11789:HG2_PB_SVrefine2Falcon2Bionano_5066;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7767:HG3_PB_SVrefine2Falcon1Dovetail_6434:HG4_PB_SVrefine2PBcRDovetail_5361;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0457604;ClusterMaxSizeDiff=0.0430686;ClusterMaxEditDist=0.227916;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=730;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=126;REFWIDENED=9:134839701-134839826;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9986;PctRecOverlap=0.9822;SizeDiff=-1;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=99;MatchId=5759.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:./.:0:12:0:3:./.:0:0:0:0:1/1:0:20:1/1:1:165:.:.:.
chr9	135017991	HG2_PB_HySA_19331	A	ACACACAACACCACAGCACACCACACACACGCACACACACGCACACCACACACACACCACACACCACACACACCACACACACGCACACCACACACACCACACACACACCGCACACACACACACCATACGCACACCACACGCACACCACACACACACCACACACACACACCATACGCACACCACACGCCACACCACACACACACACCACACACACGCGCATACACACCACACACTACACACACACCACCACACACACGCGCGCACACACACACCATACGCACACCACACACACACCATACGCACACCACACGCACACACCACACACACACCACACACACCACACACACCACACACACACACACACACACACCACACACACACACCACACACACCATACGCACACCACACACACACCCCACACACACACACCACACACACACACACACACACACACACACACACACACACCACACACACACCACACACACCACACACCACACCACACACACGCGCACACACACCACACACACACAC	10	PASS	ClusterIDs=HG4_PB_pbsv_10673:HG2_PB_HySA_19331:HG2_PB_pbsv_10625:HG2_PB_PB10Xdip_30854:HG3_PB_pbsv_10368:HG4_PB_SVrefine2Falcon1Dovetail_6526:HG3_PB_SVrefine2Falcon1Dovetail_6435:HG3_PB_SVrefine2PBcRDovetail_4961:HG2_PB_SVrefine2Falcon2Bionano_5067:HG2_PB_SVrefine2PB10Xhap12_7768:HG4_PB_SVrefine2PBcRDovetail_5362:HG2_PB_SVrefine2Falcon1plusDovetail_12597:HG2_PB_SVrefine2PBcRplusDovetail_11790;NumClusterSVs=13;ExactMatchIDs=HG2_PB_HySA_19331;NumExactMatchSVs=1;ClusterMaxShiftDist=0.183267;ClusterMaxSizeDiff=0.183267;ClusterMaxEditDist=0.243028;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=533;DistBack=17;DistForward=60;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=143;REFWIDENED=9:135017917-135018059;PctSeqSimilarity=0.9671;PctSizeSimilarity=0.9831;PctRecOverlap=0.985;SizeDiff=9;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=97;MatchId=5760.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:0:31:1:13:./.:0:0:0:0:0/1:2:9:1/1:6:152:.:591:.
chr9	135049363	HG2_PB_SVrefine2PB10Xhap12_7769	A	GGACAGGCAGGCAGGTCGAACCATGCTACGGATGAGACGGACGGATGGACGGACAGGCAGGCAGGCCACACCATGCTGCGGATGAGATGGATGGACAGACGAACG	20	PASS	ClusterIDs=HG3_Ill_250bpfermikitraw_14016:HG3_PB_pbsv_10369:HG2_PB_PB10Xdip_30855:HG3_PB_assemblyticsfalcon_28174:HG3_PB_SVrefine2PBcRDovetail_4962:HG3_PB_SVrefine2Falcon1Dovetail_6436:HG2_PB_SVrefine2PBcRplusDovetail_11791:HG2_PB_SVrefine2PB10Xhap12_7769:HG2_PB_SVrefine2Falcon2Bionano_5068:HG2_PB_SVrefine2Falcon1plusDovetail_12598:HG2_Ill_SVrefine2DISCOVARplusDovetail_13849:HG2_PB_HySA_19332;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13849:HG2_PB_SVrefine2Falcon1plusDovetail_12598:HG2_PB_SVrefine2Falcon2Bionano_5068:HG2_PB_SVrefine2PB10Xhap12_7769:HG2_PB_SVrefine2PBcRplusDovetail_11791:HG3_PB_SVrefine2Falcon1Dovetail_6436:HG3_PB_SVrefine2PBcRDovetail_4962:HG3_PB_assemblyticsfalcon_28174;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0921659;ClusterMaxSizeDiff=0.0829493;ClusterMaxEditDist=0.174312;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=104;DistBack=-1;DistForward=27;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=778;REFWIDENED=9:135049026-135049803;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=0.6476;SizeDiff=0;StartDistance=37;EndDistance=37;GTMatch=0;TruScore=88;MatchId=5761.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:0:27:3:33:./.:0:0:0:0:./.:0:3:./.:.:.:.:.:.
chr9	136779933	HG2_Ill_GATKHCSBGrefine_7266	A	AAGGGGAGGGGAGGGCACGGGAGGAAGGGAGGGGAGGGGAAGGAGCAGGGGGGGAAGGGG	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7266:HG2_PB_pbsv_10655:HG4_PB_HySA_15633:HG4_PB_assemblyticsfalcon_27695:HG4_PB_pbsv_10700:HG2_PB_HySA_19373:HG3_PB_HySA_16137:HG2_PB_assemblyticsfalcon_28281:HG2_PB_PB10Xdip_30885:HG2_Ill_breakscan11_4116:HG4_Ill_svaba_13492:HG4_Ill_scalpel_9930:HG4_Ill_GATKHC_17314:HG4_Ill_GATKHCSBGrefine_7424:HG3_Ill_svaba_13558:HG3_Ill_GATKHC_17217:HG3_Ill_GATKHCSBGrefine_7191:HG3_Ill_250bpfermikitraw_14043:HG2_Ill_svaba_13404:HG2_Ill_GATKHC_17271;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7266:HG4_Ill_svaba_13492:HG4_Ill_scalpel_9930:HG4_Ill_GATKHC_17314:HG4_Ill_GATKHCSBGrefine_7424:HG3_Ill_svaba_13558:HG3_Ill_GATKHC_17217:HG3_Ill_GATKHCSBGrefine_7191:HG3_Ill_250bpfermikitraw_14043:HG2_Ill_svaba_13404:HG2_Ill_GATKHC_17271;NumExactMatchSVs=11;ClusterMaxShiftDist=0.177419;ClusterMaxSizeDiff=0.16129;ClusterMaxEditDist=0.307692;PBcalls=8;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=28;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=100;REFWIDENED=9:136779848-136779947;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5765.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:41:1/1:0:9:1:9:./.:0:0:0:0:./.:0:6:./.:.:.:.:.:.
chr9	136868293	HG3_PB_SVrefine2PBcRDovetail_4979	T	TCCCATCCATCCACCCATCCATCCACCCACCCATCCACCCACCCATCCACCCATCCATCCACCCATCCACCCATCCACCCATCCACCCACCCATCCATCCATCCACCCACCCACCCACCCACCCATCCATCCACCCACCTATCCACCCATCCACCCATCCACCTATCCCTCCATCCATCCATCCATCCACCCATCCACCCACCCATCCACACACCCATTCATCCACCCATCCACCCATCCATCCATCCACCCATCCATCCATCCATCCATCCACCCACCCATCCACCCATCCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6545:HG2_PB_pbsv_10659:HG4_Ill_GATKHC_17317:HG2_Ill_GATKHC_17274:HG2_PB_PB10Xdip_30887:HG3_PB_pbsv_10397:HG3_PB_HySA_16141:HG4_PB_pbsv_10703:HG2_PB_SVrefine2Falcon2Bionano_5090:HG2_PB_SVrefine2Falcon1plusDovetail_12619:HG2_PB_SVrefine2PBcRplusDovetail_11811:HG2_PB_SVrefine2PB10Xhap12_7791:HG4_Ill_SVrefine2DISCOVARDovetail_7748:HG3_PB_SVrefine2PBcRDovetail_4979:HG3_PB_SVrefine2Falcon1Dovetail_6454;NumClusterSVs=15;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6454:HG3_PB_SVrefine2PBcRDovetail_4979:HG4_Ill_SVrefine2DISCOVARDovetail_7748;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0929432;ClusterMaxSizeDiff=0.0929432;ClusterMaxEditDist=0.267581;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=292;DistBack=4328;DistForward=60;DistMin=60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=447;REFWIDENED=9:136868294-136868740;PctSeqSimilarity=0.9901;PctSizeSimilarity=0.9863;PctRecOverlap=0.785;SizeDiff=4;StartDistance=-61;EndDistance=-61;GTMatch=0;TruScore=92;MatchId=5766.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:30:1/1:1:17:2:14:./.:0:0:0:0:./.:0:3:./.:.:.:.:.:.
chr9	136890094	HG2_PB_SVrefine2Falcon2Bionano_5091	A	ACCTCCTCAGCCCCTTCTCCTCTGCCAGCCCCTCCTCCCACCTCCGCTCCCAGCCCCTCCTCCTTTCCCAGCCCCTCACCATCCAGCCCCTCCTCCTCCATCTCCTCCTCCTCTCTCAGCTCCTCCTCCTCCCCCAGCTCCTCCTCCTGCTCCTCCTTCTCCTCCACTCCTCCTTCTGCTCCTCCTTCTCGTTCAGCTCCTCCTCTCCCAGCCCCTCCTCCTCCTCCAGCCCCTCCTCCTCATCCAGCCCTTTCTCCTCTCCCAGCCCCTCCTCTCCCAGCTCCTCCTCCTCCTCCAGCCCCTCCTCCTCTCCCAGCCCCTCCTCCCCAGCTCCTCCTCCAACAGCCCCTCCTCCTCCTCGCGCAGACCCTCACCATCCAGCCCCTCCTCCTTCAGCCCCTCCTCCAGCCCTTCCTCCTTCAGCCCCTCCTCCAGCCCCTCCTCCTCCAGCCCCTCCTCCTCCTCCAGCCCCTCCTCCTCCAGCCCTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5091:HG3_PB_SVrefine2PBcRDovetail_4980:HG3_PB_pbsv_10399:HG3_PB_HySA_16146:HG2_PB_assemblyticsfalcon_28285:HG2_PB_SVrefine2Falcon1plusDovetail_12621:HG2_PB_HySA_19382:HG4_PB_HySA_15638:HG3_PB_SVrefine2Falcon1Dovetail_6455:HG2_PB_SVrefine2PB10Xhap12_7793:HG4_PB_SVrefine2Falcon1Dovetail_6547:HG2_PB_SVrefine2PBcRplusDovetail_11812:HG2_PB_SVrefine2PB10Xhap12_7792:HG4_PB_SVrefine2PBcRDovetail_5379;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5091:HG4_PB_SVrefine2PBcRDovetail_5379;NumExactMatchSVs=2;ClusterMaxShiftDist=0.179104;ClusterMaxSizeDiff=0.179104;ClusterMaxEditDist=0.276329;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=487;DistBack=10353;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=355;REFWIDENED=9:136890095-136890449;PctSeqSimilarity=0.9533;PctSizeSimilarity=0.961;PctRecOverlap=0.3799;SizeDiff=19;StartDistance=-293;EndDistance=-293;GTMatch=1;TruScore=76;MatchId=5767.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:50:1/1:1:19:5:24:./.:0:0:0:0:./.:0:1:./.:3:39:.:.:.
chr9	137099154	HG2_PB_SVrefine2Falcon2Bionano_5093	A	AGTCCTCCCCACGTGTCCTCCCGACCTGTCCTCTCCACCCGTCTCCCCCTCCATCCTCCCCACCTGTCCTCCTCACCTGTCCTCCCAGTGGTCCTCCCCCCATCCTCCCCACCTGTCCTCCCCACCTGTCCTCCCCACCTGTCCTCCCCATCGGTCCTCCGTACCAGTCCTCCCCCATCCTCTCCAGCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5093:HG2_PB_pbsv_10662:HG2_PB_HySA_19387:HG2_PB_SVrefine2PBcRplusDovetail_11814;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5093;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0543478;ClusterMaxSizeDiff=0.0543478;ClusterMaxEditDist=0.19726;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=188;DistBack=2497;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=670;REFWIDENED=9:137099155-137099824;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:25:0|1:19:0:2:24:./.:0:0:0:0:0/1:6:6:./.:.:.:.:.:.
chr9	137114633	HG4_PB_SVrefine2PBcRDovetail_5381	T	TTCACCTCCCCTCCCCTTCCTTCCCCTCCCCTCCACTCCCTTCCCCTCCCCTCTCCTCCGTTCCTTTTCCCTCCCTCCCCTCCCTTCCCTTCCCTTCACTCCCCTCCCCTCCCTTCTCCTCCCCTCCCTTCCCTTCCCTCCCCTCCCCTCCCCTTCCGTCCCCTCCCCTCCCTTCCCTTCTCTCCCGTCCCCTCCCTCCCCTCCCTTCCGTTCCC	10	PASS	ClusterIDs=HG2_PB_pbsv_10663:HG2_PB_assemblyticsfalcon_28291:HG3_PB_HySA_16149:HG2_PB_SVrefine2Falcon1plusDovetail_12625:HG4_PB_HySA_15642:HG2_PB_HySA_19388:HG3_PB_pbsv_10404:HG4_PB_pbsv_10709:HG3_PB_SVrefine2Falcon1Dovetail_6459:HG3_PB_SVrefine2PBcRDovetail_4983:HG4_PB_assemblyticsfalcon_27704:HG4_PB_SVrefine2Falcon1Dovetail_6551:HG2_PB_SVrefine2Falcon1plusDovetail_12624:HG2_PB_SVrefine2Falcon2Bionano_5094:HG4_PB_SVrefine2PBcRDovetail_5381:HG2_PB_SVrefine2PB10Xhap12_7796:HG2_PB_SVrefine2PBcRplusDovetail_11815;NumClusterSVs=17;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_5381;NumExactMatchSVs=1;ClusterMaxShiftDist=0.167901;ClusterMaxSizeDiff=0.167901;ClusterMaxEditDist=0.235577;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=214;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=45;REFWIDENED=9:137114634-137114678;PctSeqSimilarity=0.9933;PctSizeSimilarity=1;PctRecOverlap=0.9581;SizeDiff=0;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=98;MatchId=5770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:1:19:0:21:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr9	137146229	HG2_PB_SVrefine2PB10Xhap12_7797	A	AAGAAAGACAGAGAGAGAGAGAAAGCGAGAGAAAGAGAGAGAGAAAGAGACAGGAAGAGAGAGAGACAGAGAGAGAGCTAGGAGAGAGACATAGGAGAGAGAAAGAGAAGGAGAGAGAAAGAGAAAGAGAGAGAGAGGAGAGAGAGAGATAGAGGAGAGAGAGAAAGAAAGAGAGGAGAGAGACAGAAAGAGAAAGAGAGAAAGAAGGAGAGAGAAAGAGAGAGAGCAAGAGAAGAAGAGGAGGAGGAGGAAGGTGAGGGGGAGGAGGAGAAGGAGGAGAAGAAGGGGGAGGAGGAGGGGGATGGGGAGGGGGGTGAAGGGAGGGGGGAGGGGGAGGTGAAGGGAGGGAGGGAGAAGGAGGG	20	PASS	ClusterIDs=HG2_PB_pbsv_10664:HG2_PB_assemblyticsfalcon_28294:HG3_PB_SVrefine2Falcon1Dovetail_6460:HG4_PB_SVrefine2PBcRDovetail_5382:HG4_Ill_GATKHCSBGrefine_7429:HG4_Ill_MetaSV_5725:HG2_PB_SVrefine2Falcon1plusDovetail_12626:HG2_PB_SVrefine2Falcon2Bionano_5095:HG2_Ill_MetaSV_5479:HG2_PB_SVrefine2PBcRplusDovetail_11816:HG2_PB_SVrefine2PB10Xhap12_7797:HG3_Ill_MetaSV_5657:HG3_PB_SVrefine2PBcRDovetail_4984:HG2_PB_HySA_19390:HG2_PB_PB10Xdip_30895:HG3_PB_HySA_16151:HG4_PB_SVrefine2Falcon1Dovetail_6552:HG4_PB_assemblyticsfalcon_27707;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7797:HG2_PB_SVrefine2PBcRplusDovetail_11816;NumExactMatchSVs=2;ClusterMaxShiftDist=0.215247;ClusterMaxSizeDiff=0.215247;ClusterMaxEditDist=0.267496;PBcalls=14;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=361;DistBack=-6;DistForward=-1;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=9:137146230-137146231;PctSeqSimilarity=0.9972;PctSizeSimilarity=0.9945;PctRecOverlap=0.9945;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=5771.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:34:1/1:1:13:1:11:./.:0:0:0:0:1/1:0:11:1/1:2:34:.:.:.
chr9	137177294	HG4_Ill_SVrefine2DISCOVARDovetail_7751	C	CTGTGTCTGTGTGCGTGTGTTTGTGGTGTGTGTGTGTGTCTGTGTGTGTGTCTGCATGTATGGTGAGTGTGTGGTGTGGTGTGTGTCTGTGTGTGTGATGTGTGTCTGTGTGGTGTGCATCTGTGTATATGGTGTGTGTGTGGTGTGTGTGTATGGTATGTGTGGTGTGTGTCTGTGTGGTGTGTATGTGTCTGTGTGTGTGGTATGTGTCTGTGTGGTGTGTGTCTGTGTGGTGTGTATGTGTCTGTGTGTGTGGTATGTGTCTGTGTGGTGTGTGTGTGGTGTGTGTCTGTGGTATGTCTGTGTGTGTGGTGTGTGTCTGTGTGGTGTGTGTGTATGGTATGTGTATTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6461:HG2_PB_HySA_19394:HG2_PB_pbsv_10666:HG3_PB_pbsv_10408:HG2_PB_PB10Xdip_30897:HG4_PB_HySA_15646:HG2_Ill_MetaSV_5480:HG3_Ill_GATKHCSBGrefine_7193:HG4_Ill_MetaSV_5726:HG4_PB_pbsv_10713:HG2_PB_SVrefine2PB10Xhap12_7798:HG2_PB_SVrefine2PBcRplusDovetail_11817:HG2_PB_SVrefine2Falcon2Bionano_5096:HG2_Ill_SVrefine2DISCOVARplusDovetail_13866:HG4_PB_SVrefine2Falcon1Dovetail_6553:HG3_PB_SVrefine2PBcRDovetail_4985:HG4_PB_SVrefine2PBcRDovetail_5383:HG4_Ill_SVrefine2DISCOVARDovetail_7751:HG2_PB_SVrefine2Falcon1plusDovetail_12627:HG3_Ill_SVrefine2DISCOVARDovetail_7956;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12627:HG4_Ill_SVrefine2DISCOVARDovetail_7751:HG4_PB_SVrefine2PBcRDovetail_5383;NumExactMatchSVs=3;ClusterMaxShiftDist=0.260372;ClusterMaxSizeDiff=0.243205;ClusterMaxEditDist=0.322767;PBcalls=14;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=350;DistBack=7090;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=161;REFWIDENED=9:137177295-137177455;PctSeqSimilarity=0.97;PctSizeSimilarity=0.9749;PctRecOverlap=0.6323;SizeDiff=-9;StartDistance=-128;EndDistance=-128;GTMatch=1;TruScore=85;MatchId=5772.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:0:9:0:18:./.:0:0:0:0:1/1:0:14:1/1:0:80:.:.:.
chr9	137193125	HG3_Ill_manta_2500	A	AAAAGAGAGAAGGAAAGAGAGCGAGAGAGGGAGGGAGGGAGGGGGAGGGAGGGAAGGAAGGAAAGAAGGAAGGGAGGAAGGAAGGGAGGGAGGGAGAAAGGGAGAGGAGGGGAAGGGAAGGGAGGGGAGAAAGGAAGGAAGGAGAGGGAAAGAGAAAAGGAAGGAGAGAGAAAGAGAGAAAAGGCAGGAAAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5384:HG2_PB_SVrefine2Falcon1plusDovetail_12628:HG2_PB_SVrefine2Falcon2Bionano_5098:HG3_PB_HySA_16155:HG3_PB_SVrefine2Falcon1Dovetail_6462:HG4_PB_HySA_15647:HG4_PB_pbsv_10714:HG4_PB_assemblyticsfalcon_27711:HG2_PB_PB10Xdip_30900:HG2_Ill_breakscan11_4118:HG4_PB_SVrefine2Falcon1Dovetail_6554:HG4_Ill_manta_2593:HG4_Ill_MetaSV_5727:HG4_Ill_GATKHCSBGrefine_7430:HG4_Ill_250bpfermikitraw_14316:HG3_Ill_manta_2500:HG3_Ill_MetaSV_5658:HG3_Ill_GATKHCSBGrefine_7195:HG2_Ill_manta_3051:HG2_Ill_MetaSV_5481:HG2_Ill_GATKHCSBGrefine_7269:HG2_PB_pbsv_10668:HG3_PB_pbsv_10410:HG3_PB_SVrefine2PBcRDovetail_4986:HG2_PB_SVrefine2PBcRplusDovetail_11819:HG2_PB_SVrefine2PB10Xhap12_7800:HG2_Ill_SVrefine2DISCOVARplusDovetail_13867:HG4_Ill_SVrefine2DISCOVARDovetail_7752:HG3_Ill_SVrefine2DISCOVARDovetail_7958;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7269:HG2_Ill_MetaSV_5481:HG2_Ill_manta_3051:HG3_Ill_GATKHCSBGrefine_7195:HG3_Ill_MetaSV_5658:HG3_Ill_manta_2500:HG4_Ill_250bpfermikitraw_14316:HG4_Ill_GATKHCSBGrefine_7430:HG4_Ill_MetaSV_5727:HG4_Ill_manta_2593;NumExactMatchSVs=10;ClusterMaxShiftDist=0.147139;ClusterMaxSizeDiff=0.113821;ClusterMaxEditDist=0.359673;PBcalls=15;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=191;DistBack=4;DistForward=7;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=237;REFWIDENED=9:137192910-137193146;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5773.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:2:23:1:20:./.:0:0:0:0:1/1:0:27:./.:.:.:.:.:.
chr9	137260879	HG2_PB_SVrefine2PB10Xhap12_7801	T	TGGGGGGTTATGTGTGTATGGGGGGTTATGTGTGGGGGGAGTTGTGTGTGTGGGGGTTATGTGTGTGTGTGAGTGCCGGGGTTATGTGTGTGTGAGTGCGGGGGTTGTGTGTGTGGGGTTATGTGTGTGTGAGTGCGGGGCTTGTGTGTGTGTGTGTGGGGGGGGTTATGTGTGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12629:HG2_PB_pbsv_10669:HG4_PB_SVrefine2PBcRDovetail_5385:HG2_PB_SVrefine2PBcRplusDovetail_11820:HG2_PB_SVrefine2PB10Xhap12_7801:HG4_PB_pbsv_10715:HG2_PB_HySA_19397:HG3_PB_pbsv_10411:HG3_PB_SVrefine2Falcon1Dovetail_6463:HG3_PB_SVrefine2PBcRDovetail_4987:HG4_PB_SVrefine2Falcon1Dovetail_6555:HG2_PB_SVrefine2Falcon2Bionano_5099;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7801:HG2_PB_SVrefine2PBcRplusDovetail_11820;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0957747;ClusterMaxSizeDiff=0.084507;ClusterMaxEditDist=0.200542;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=175;DistBack=16;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=642;REFWIDENED=9:137260743-137261384;PctSeqSimilarity=0.9972;PctSizeSimilarity=0.9943;PctRecOverlap=0.9887;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:28:./.:2:7:0:3:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr9	137268473	HG3_Ill_250bpfermikitraw_14051	T	TCTCAGAGAACCAGTGAGACCTGTGCCGCGTCCTCTGTCTATAGAAGGTGATGCTTAGGGAGCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30903:HG4_PB_pbsv_10716:HG3_PB_HySA_16156:HG2_PB_HySA_19398:HG4_PB_assemblyticsfalcon_27713:HG2_PB_pbsv_10670:HG4_Ill_svaba_13503:HG4_Ill_Krunchall_15034:HG4_Ill_GATKHC_17324:HG4_Ill_GATKHCSBGrefine_7431:HG4_Ill_250bpfermikitraw_14317:HG4_Ill_150bpfermikitraw_13722:HG3_Ill_svaba_13566:HG3_Ill_Krunchall_14484:HG3_Ill_GATKHC_17227:HG3_Ill_GATKHCSBGrefine_7196:HG3_Ill_250bpfermikitraw_14051:HG3_Ill_150bpfermikitraw_13604:HG2_PB_assemblyticsfalcon_28301:HG2_Ill_svaba_13415:HG2_Ill_manta_3052:HG2_Ill_Krunchall_14772:HG2_Ill_GATKHC_17283:HG2_Ill_GATKHCSBGrefine_7270:HG2_Ill_250bpfermikitraw_14439:HG2_Ill_150bpfermikitraw_13567:HG4_PB_HySA_15648;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13567:HG2_Ill_250bpfermikitraw_14439:HG2_Ill_GATKHCSBGrefine_7270:HG2_Ill_GATKHC_17283:HG2_Ill_Krunchall_14772:HG2_Ill_manta_3052:HG2_Ill_svaba_13415:HG2_PB_assemblyticsfalcon_28301:HG3_Ill_150bpfermikitraw_13604:HG3_Ill_250bpfermikitraw_14051:HG3_Ill_GATKHCSBGrefine_7196:HG3_Ill_GATKHC_17227:HG3_Ill_Krunchall_14484:HG3_Ill_svaba_13566:HG4_Ill_150bpfermikitraw_13722:HG4_Ill_250bpfermikitraw_14317:HG4_Ill_GATKHCSBGrefine_7431:HG4_Ill_GATKHC_17324:HG4_Ill_Krunchall_15034:HG4_Ill_svaba_13503:HG4_PB_assemblyticsfalcon_27713;NumExactMatchSVs=21;ClusterMaxShiftDist=0.108527;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.330827;PBcalls=8;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=63;DistBack=38;DistForward=23;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=9:137268433-137268498;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5775.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:40:1/1:2:18:1:18:./.:0:0:0:0:1/1:2:42:./.:.:.:.:.:.
chr9	137343882	HG3_PB_SVrefine2Falcon1Dovetail_6466	A	ATCCACTCATCCATCTACCCACCCATCCATCTACCCACCCACCAATCCATCTACCCATCCATCCGTCTACCCACCCACCCATCCACCCACCCATCCATCCACCCACC	20	PASS	ClusterIDs=HG2_PB_pbsv_10674:HG2_PB_PB10Xdip_30908:HG2_PB_assemblyticsfalcon_28303:HG2_PB_SVrefine2Falcon1plusDovetail_12631:HG2_PB_SVrefine2PBcRplusDovetail_11822:HG2_PB_SVrefine2PB10Xhap12_7804:HG4_Ill_SVrefine2DISCOVARDovetail_7754:HG4_PB_assemblyticsfalcon_27717:HG4_PB_SVrefine2PBcRDovetail_5388:HG4_PB_SVrefine2Falcon1Dovetail_6557:HG2_PB_SVrefine2Falcon2Bionano_5101:HG4_Ill_GATKHCSBGrefine_7432:HG3_PB_SVrefine2PBcRDovetail_4990:HG3_PB_SVrefine2Falcon1Dovetail_6466:HG3_Ill_SVrefine2DISCOVARDovetail_7961:HG2_PB_assemblyticsPBcR_27554:HG2_Ill_GATKHCSBGrefine_7271:HG2_PB_HySA_19399:HG4_PB_pbsv_10719:HG3_PB_pbsv_10416;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7271:HG2_PB_assemblyticsPBcR_27554:HG3_Ill_SVrefine2DISCOVARDovetail_7961:HG3_PB_SVrefine2Falcon1Dovetail_6466:HG3_PB_SVrefine2PBcRDovetail_4990:HG4_Ill_GATKHCSBGrefine_7432;NumExactMatchSVs=6;ClusterMaxShiftDist=0.139535;ClusterMaxSizeDiff=0.139535;ClusterMaxEditDist=0.317308;PBcalls=16;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=106;DistBack=-1;DistForward=34;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=9:137343883-137343883;PctSeqSimilarity=0.9817;PctSizeSimilarity=0.9636;PctRecOverlap=0.964;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=5776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:33:./.:0:6:1:3:./.:0:0:0:0:./.:0:6:./.:.:.:.:.:.
chr9	137470119	HG2_PB_PB10Xdip_30928	AAA	GCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCACAGTCTCCTTCCACAGTCTCCTTCCACGGTCTCCCTCTGATGCCGAGCCAAGGCTGGACGGTGCTGCTGCCATCTCGGCTCACTGCAGCCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCTACGCCTCACTGGTTTTCGTTTTTTTTTTGGTGGAGACGGGTTTTGCTGTGTTGGCCGGCTGGTCTCCAGCTCCTAGCCGCGAGTGATCCGCCAGCCTCGGCCTCCTGGGGTGCCGGGATTGCGGACGGAGTCTCGTTCACTCAGTGCTCAGTGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAGCCTCCACCTCCCAGCCGCCTGCCTTGGCCCCCCAAAGTGCCGAGATTGCAGCCTCTGCCCAGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATATGAGGAGCCTCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCTTCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGCCGCAACCCTGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGTCGCCCCGTCCAGGAGGGAGTTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGTGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGTGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCAGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCACCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCACGCCCGACCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGGGGGGGGTCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGACGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCTGCCCTGTCCGGGAGGATGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCACTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTGGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAAACGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11827:HG2_PB_SVrefine2PB10Xhap12_7808:HG2_PB_PB10Xdip_30928:HG2_PB_SVrefine2Falcon1plusDovetail_12635:HG2_PB_assemblyticsfalcon_28310:HG2_PB_HySA_19413:HG2_PB_pbsv_10681:HG2_PB_assemblyticsPBcR_27562;NumClusterSVs=8;ExactMatchIDs=HG2_PB_PB10Xdip_30928:HG2_PB_SVrefine2PB10Xhap12_7808;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0964694;ClusterMaxSizeDiff=0.0964694;ClusterMaxEditDist=0.181336;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2869;DistBack=3306;DistForward=1489;DistMin=1489;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=9:137470122-137470118;PctSeqSimilarity=0.963;PctSizeSimilarity=0.9282;PctRecOverlap=0.9288;SizeDiff=-222;StartDistance=18;EndDistance=20;GTMatch=0;TruScore=94;MatchId=5780.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:47:./.:15:10:1:1:./.:0:0:0:0:./.:31:2:0/1:111:187:.:3156:.
chr9	137548736	HG2_PB_SVrefine2PB10Xhap12_7811	T	TTATAGATAATATGGGGGACGGGGCAGGGGGTGCACTTTATAGATAATATGGGGGGGTGAGACAGGGGGTGCAGTTTATAGATAATATGGGGGACGGGGCAGGGGGTGCACTTTATAGATAATATGGGGGGGTGAGACAGGGGGTGCAGTTTATAGATAATATGGGGGGTGGGGCAGGGGGTGTAGTTAATAGATAATATGGGGGTCAGGGCGGGGGTGCAGTTTATAGATGATATGGGGGTGGGGAGGGGGGTGCAGTTTATAGATGATATGGGGGTGGGGAAGGGATGCAGTTTATAGATGATATGGGGGTGGGGACAGGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGTGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGCGGGGTGGGGGTGCAGTTTATAGATAATATGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGTGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGCGGGGTGGGGGTGCAGTTTATAGATAATATGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGTGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGGCGGGGCGGGGGTGCAGTTTATAGATAATATGGGGGCGGGGCGGGGGTGTAGCTTATAGATAATATGGGGGCAGGGCCAGAGTATAGTTTATAGATAATATGGAGGCGGGGCGGGGGTACAGTTTATAGATAATATGGAGGCGGGGCGGGGGTGTAGTTTATAGGTAATATGGAGGTGGGGTAGGGGAGTGCAGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5106:HG3_PB_pbsv_10428:HG2_PB_HySA_19416:HG2_PB_HySA_19415:HG2_PB_PB10Xdip_30930:HG3_PB_SVrefine2Falcon1Dovetail_6474:HG2_PB_SVrefine2PBcRplusDovetail_11830:HG2_PB_SVrefine2PB10Xhap12_7811:HG4_PB_SVrefine2Falcon1Dovetail_6564;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7811:HG2_PB_SVrefine2PBcRplusDovetail_11830;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0589047;ClusterMaxSizeDiff=0.0579844;ClusterMaxEditDist=0.229885;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1076;DistBack=12299;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=252;REFWIDENED=9:137548737-137548988;PctSeqSimilarity=0.8706;PctSizeSimilarity=0.753;PctRecOverlap=0.7236;SizeDiff=-353;StartDistance=-219;EndDistance=-219;GTMatch=0;TruScore=78;MatchId=5781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:36:./.:0:3:0:3:./.:0:0:0:0:./.:0:0:0/1:7:32:.:2084:.
chr9	137606202	HG2_PB_SVrefine2PB10Xhap12_7813	A	AGTGGTGTGGTGGTAATGGTCATGATGGTAGTGATGGTGGTGGTGGTAGTGGTGGTGGTGAAGGTGATGGTGATGTTTATGGTGGTGGATATGCTGATGATGGTGATGGTGGTTGTGGAGAGGTGGTGATGGTCATGGTGAATGTTATGATGGTGATGATGATGGTGTTGGTGGTGATGATAATGGTAGTGGTGATGGGTATACTGCTGATGGTGATGCTGGTGATGGTGGTGATGCTGGTGATGGTGGTGACGGAGGTAGTGGTGGTTGTGACGATCTGGTAGTGTGGTGATTCTATGGTTTTGGTGGTCGTGGTGGTGGTGGAGGTGATGCTGGTGGTGGTGATAGTGAAGAGGATGGTTGTAGTGATGATGGTGATAGTGGTGGTAGAGGTGATGGTGGTTATGGTGATCCTGATGGAAGTGGTGATGGAGGTGATGGTGATGGTGATGCTGGTGATGATGATGCTGGTGATGGAGGTGATGGTCATGGTGGTGGTGATGCTGGTAGTGTGATGGTTCTGTGGTTTGGTGGTGGTGGTAATGCTGGTGATGGTAGTCATAGAGGTGATGGTGGTGGTGGTGATGGTGGTGGTGGAGGTGATGATGGTGGTGGTGATACTTGTGGAGGTGGTGGTGAAGGTGATGGTGGTGATGATGGTGGTGGTGGTGATGCTGGTGAAGATGGTGATGGTGATGGTGGTGATGGTGGTGGTGATGCTGGTGATGGTAGTCATAGAGGTGATGGTGGTGGTGGTGATGGTGGTGGTGGAGGTGATGGTGGTGATGGTGTTGCTTGTGGAGGTGGTGGTGAAGGTAATGGTGGTGATGGTGGTGGTGGTGGTGGTGATGCTGGTGATGGTAGTTGTAGAGGTGATGGTGGTGGTGATGGTGGTGGTGGAGGTGATGATGCTGGTGGTGATACTTGTGGAGGTGGTGGTGAAGGTGATGGTGGCGATGATGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGGTGGTGATGCTGGTGATGGTAGTCGTAGAGGTGATGGTGTTGGTGGAGGTGATGGTGGTGATGGTGATGCTTGTGGAGGTGGTGGTGAAGGTGATGGTGGTGATGGTGGTGATGGTGGTGGTGGTGGTGATGCTGGTGATGGTAGTCGTAGAGGTGATGGTGGTGGTGGAGGTGATGGTGGTGATGGTGATGCTTGTGGAGGTGGTGGTGAAGGTGATGGTGGTGATGATGGTGGTGGCGGTGGTGGTGGTGATGCTGGTGAAGGTGGTGATGGTGGTGATGGTGGTGGTGGTGATGCTGGTGATGGTAGTCCTAGAGGTGATGGTGGTGGTGGAGGTGATGGTGGTGATGGTGATGCTTGTGGAGGTGGTGGTGAAGGTGATGGTGGTGATGCTGGTGAAGGTGGTGATGGTGGTGATGGTGGTGGTGGTGGTGATGCTGGTGATGGTAGTCATAGAGGTGATGGTGGTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4997:HG2_PB_pbsv_10686:HG3_PB_pbsv_10429:HG4_PB_HySA_15662:HG2_PB_HySA_19420:HG2_PB_PB10Xdip_30936:HG2_Ill_breakscan11_4120:HG2_PB_HySA_19419:HG4_PB_pbsv_10730:HG4_PB_SVrefine2Falcon1Dovetail_6567:HG4_PB_assemblyticsfalcon_27738:HG2_PB_assemblyticsfalcon_28314:HG2_PB_assemblyticsPBcR_27569:HG3_PB_SVrefine2Falcon1Dovetail_6476:HG2_PB_SVrefine2Falcon2Bionano_5108:HG2_PB_SVrefine2Falcon1plusDovetail_12639:HG4_PB_SVrefine2PBcRDovetail_5394:HG2_PB_SVrefine2PBcRplusDovetail_11832:HG2_PB_SVrefine2PB10Xhap12_7813;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7813:HG2_PB_SVrefine2PBcRplusDovetail_11832:HG4_PB_SVrefine2PBcRDovetail_5394;NumExactMatchSVs=3;ClusterMaxShiftDist=0.201739;ClusterMaxSizeDiff=0.201739;ClusterMaxEditDist=0.272028;PBcalls=18;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1465;DistBack=81;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=116;REFWIDENED=9:137606203-137606318;PctSeqSimilarity=0.9899;PctSizeSimilarity=0.9932;PctRecOverlap=0.9214;SizeDiff=-10;StartDistance=-111;EndDistance=-111;GTMatch=0;TruScore=96;MatchId=5783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:1:15:0:32:./.:0:0:0:0:1/1:0:16:1/1:3:348:.:2084:.
chr9	137621288	HG4_PB_SVrefine2Falcon1Dovetail_6568	T	TGTGTGCATGAACGAGTGTGTGTGAGCATGTGGCATGCAGGCACGGGTGTGCTTGAGCCTGCGTGTGTGTGAGAGTGTGTGTGAGCGTGTGTGCATGCGGGCAGGGTGTGCATGAGCCTGTGTGTGTGTGAGAGTGTGTGTGAGCGTGTGTGCATGCGGGCACGGGTGTGCATGAGCCTGTGTGTGTGAGCGTGTGTGAGCGTGTGTGCATGCGGGCACGGGTGTGCATGAGCCTGTGTGTGTGAGCGTGTGTGAGCGTGTGTGCATGCGGGCACGGGTGTGCATGAGCCTGTGTGTGTGAGCGTGTGTGAGCGTGTGTGCGTGCGGGCACGGGTGTGCATGAGCCTGTGTGTGTGAGCGTGTGTGAGCGTGTGTGCGTGCGGGCACGGGTGTGCATGAGCCTGTGTGTGTGAGCGTGTGTGAGCGTGTGTGCATGCGGGCACGGGTGTGCATGAGCCTGTGTGTGTGAGCGTGTGTGAGCGTGTGTGCATGCGGGCACGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4998:HG3_PB_HySA_16189:HG4_PB_pbsv_10731:HG3_PB_pbsv_10430:HG2_PB_HySA_19421:HG2_PB_pbsv_10687:HG4_PB_SVrefine2Falcon1Dovetail_6568:HG2_PB_SVrefine2PB10Xhap12_7814:HG2_PB_SVrefine2Falcon1plusDovetail_12640:HG3_PB_SVrefine2Falcon1Dovetail_6477;NumClusterSVs=10;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_6568;NumExactMatchSVs=1;ClusterMaxShiftDist=0.210526;ClusterMaxSizeDiff=0.210526;ClusterMaxEditDist=0.267206;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=500;DistBack=14970;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=418;REFWIDENED=9:137621289-137621706;PctSeqSimilarity=0.9857;PctSizeSimilarity=0.996;PctRecOverlap=0.8104;SizeDiff=2;StartDistance=-94;EndDistance=-94;GTMatch=0;TruScore=93;MatchId=5784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:30:0|1:19:4:1:29:./.:0:0:0:0:0/1:4:8:0/1:2:10:.:.:.
chr9	137720505	HG4_Ill_GATKHC_17338	C	CAGATACACATCACACACAACATGCACCACACATACCACACAGATACATACTACACCCACACACACGATATACACCACACATCACACACCACACAG	20	PASS	ClusterIDs=HG2_PB_pbsv_10690:HG4_PB_SVrefine2PBcRDovetail_5396:HG3_PB_pbsv_10434:HG2_PB_assemblyticsPBcR_27573:HG4_Ill_scalpel_9941:HG4_Ill_SVrefine2DISCOVARDovetail_7759:HG2_PB_SVrefine2PBcRplusDovetail_11834:HG2_PB_SVrefine2Falcon2Bionano_5109:HG2_Ill_scalpel_10225:HG2_Ill_manta_3054:HG4_Ill_manta_2596:HG4_Ill_Krunchall_15040:HG4_Ill_GATKHC_17338:HG4_Ill_GATKHCSBGrefine_7438:HG4_Ill_250bpfermikitraw_14326:HG3_PB_SVrefine2PBcRDovetail_5000:HG3_PB_SVrefine2Falcon1Dovetail_6478:HG3_Ill_scalpel_10364:HG3_Ill_manta_2501:HG3_Ill_Spiral_11290:HG3_Ill_SVrefine2DISCOVARDovetail_7964:HG3_Ill_Krunchall_14492:HG3_Ill_GATKHC_17238:HG3_Ill_GATKHCSBGrefine_7204:HG3_Ill_250bpfermikitraw_14062:HG3_Ill_150bpfermikitraw_13613:HG2_PB_SVrefine2PB10Xhap12_7815:HG2_Ill_SVrefine2DISCOVARplusDovetail_13877:HG2_Ill_MetaSV_5484:HG2_Ill_GATKHC_17296:HG2_Ill_GATKHCSBGrefine_7276:HG2_Ill_250bpfermikitraw_14447:HG2_PB_PB10Xdip_30940;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14447:HG2_Ill_GATKHCSBGrefine_7276:HG2_Ill_GATKHC_17296:HG2_Ill_MetaSV_5484:HG2_Ill_SVrefine2DISCOVARplusDovetail_13877:HG2_PB_SVrefine2PB10Xhap12_7815:HG3_Ill_150bpfermikitraw_13613:HG3_Ill_250bpfermikitraw_14062:HG3_Ill_GATKHCSBGrefine_7204:HG3_Ill_GATKHC_17238:HG3_Ill_Krunchall_14492:HG3_Ill_SVrefine2DISCOVARDovetail_7964:HG3_Ill_Spiral_11290:HG3_Ill_manta_2501:HG3_Ill_scalpel_10364:HG3_PB_SVrefine2Falcon1Dovetail_6478:HG3_PB_SVrefine2PBcRDovetail_5000:HG4_Ill_250bpfermikitraw_14326:HG4_Ill_GATKHCSBGrefine_7438:HG4_Ill_GATKHC_17338:HG4_Ill_Krunchall_15040:HG4_Ill_manta_2596;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0808081;ClusterMaxSizeDiff=0.0808081;ClusterMaxEditDist=0.252525;PBcalls=10;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=95;DistBack=14;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=9:137720506-137720506;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:44:1/1:4:25:0:16:./.:0:0:0:0:1/1:1:24:./.:.:.:.:.:.
chr9	138021106	HG3_PB_pbsv_10441	A	AAATGGCAGGGGGTACCACAGGGGTCCCGGGCTGGGACAGTGGGTGGGGATGGCAGGGGGTAACAGACGGGTCTGGGCTGGACAGTGGGGTGGGTATGGTGGGAGGTGACATGGGGTGCTTGGGGATGGGGCAGTGGGGTGGGGGATAGAGGGGTAACACGGGGTCTGGCTGGGACAAGTGGGGCGGATGGTGGGGAGGTGAGCATGGGGTGCTTTGGGCTGGCAGTGGGGTGGGGATGGCAGGGGGTAACACGGGGTCCTGGCTGGGACAGTGGGTGGGTATGGTGGGAAGGTGACATGGGGTGCTTGGGGTGGGACTAGTGGGGTGGGGATGGCAGGGGGTACAGGGGTCCTGGCTGGGACAGTGGGGAGTGGGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6575:HG3_PB_pbsv_10441:HG2_PB_pbsv_10698:HG2_PB_SVrefine2Falcon2Bionano_5113;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_10441;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0616967;ClusterMaxSizeDiff=0.0616967;ClusterMaxEditDist=0.177378;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=376;DistBack=30;DistForward=30;DistMin=30;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=204;REFWIDENED=9:138021046-138021249;PctSeqSimilarity=0.9463;PctSizeSimilarity=0.9792;PctRecOverlap=0.9792;SizeDiff=-8;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=96;MatchId=5786.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:33:0|1:24:6:3:23:./.:0:0:0:0:0/0:9:0:0/1:7:5:.:.:.
chr9	138241927	HG3_Ill_SVrefine2DISCOVARDovetail_7969	C	CCCATCATCCTGTGCCACGCGGGCAAGGGTCGGCGCTGGGGCAGCGGGGAGGGCACCCAGCCCTTGGCAAGCGGAAAAGACACCCCCGGGGTCTCTGCCTCTCCCTGCTGAACCCTCTGCTGGCTCGGTTCCCAGGAGGCCCGGAGGAGCACACTCTCACCTTAGGCAAAGTAATGCAGCAACTGTGCCTCGGTTTCCCCTCTGGGGAGGTGGGGGAAACATCATGTCTATGTTGTATACTCTGTGAGACTTGCAAGGCACCGAGTGGGTTCCCGCCCACTGTAAGCACGTGCCAATGCCCCTGCTATGTGTCCAGCGGCAATGGGAGCTCCTGGGGGCAAGCACCCAGATCTCACTCAGGCCAGGACCGTTCTCCAGCCAGGGCCTCAGCACCTGCTGTACGCGGGCCCCACCGGAGCATCCCATGCAGCGGGTCTGGGGTGGGACCTGAGAATGGGCGTGTCTAGCAACTTCCCAGGGGCTACTGATCTGCCGGTCCAGGGACCACACGGTGAGACTCCCCTGCACCAGAGAGAGCGCCCAGGGCTGCGTGGGGCCGTGGGCGGGAAGGGAAGCAGGAAGGAGTCAGAAGTCCTCGCTGGGGCCCAGCAGGAGGTGAGCAGAGGGGTCTGTGTGGGTGGGAGATGCCTGTGCCATGCCTGTCCAGCCCCCGCCCCTCAGGGCTGCCAGCAACCCGTCCCTGGGTGCCACCCCCCTTGCCCCCTTGCCCAGAGCTCCCACACGGTGTCATCATCACTTTGAGCCCCCACAGCACCCGGCGCCACCAGGTCAAGTCTGCCTGATCTTCGAGCTCTACCAGGTCCCTCTGCAGCGCCTCGTTCACGCCTCACAACGGCAGCCTGGATGTCACAGCACTGTGTCCAGGTGAGCAAAACAAAGCTCAGGTGGGAGACTTGGGTCATCTCCTTGGCCAGGGCCGCTGGCTCCATCCAAGTCCCAAGTTCTCTCCTCCAAACTTCCGCCTTAACTTTCTCCCTTCAAACTCTGAGGCTGAGCTTCCAACCAGGGCCCAAGCCCTAGTCTCTGGGAGTACCTAATCCACGTGGTCTCTAACCCTAACCCAAGACAAGCCTGGACCTGTGGCCCCCACACTCCCGGCTCCCCTAGGGACAGCCAGGCCCCTCTCTCCCTGTCTCCATGGTGCAGGCCCTGAGGAGAGCTGCCGGGCCCCAGGATGAGCATCTACAGCTCTCACAGGCGGTCTTTGCCAAGGTTGGCATCCTGGCATGAAAAGGCAGACATGACTCAGTAACGGTGAAGAAGGACTCGCTCCAGTGCTGAGCTCCCAGGGCGCGTCCCCAGCCCGCAGGGGGTGGAGAATGGGGAGGATGGGTGGTCTGATGACATCAGTGAGAGCCGCAGAAGGACCCAGCAGCCAGCTCTGGGGCGGGGCATCAGGCTGGAACCAGAACAGGTGTAGGTCGGGGAACCTGATATAAACCAGCCAGTGGCAGGACAGCCCAGAGCTTCCCGAGGAGTAGCAGGCAGACAGAGCTTGCCCAGCGGGAGGGCACAAGTGTGTGTTCACAGGTGCATGAGGAAGGGGCTTTGGGGTTTGTAGAGGGCTTTGCAAGTGGCAGGGACTTACTGGTCATTGATAAAAGGGCCAGCAGTGTCAGGAACTCAACCAGAGTCAAGAGTCAGAGACTCGATATGGTCTGGGGGCTCGGCTGGGGATCTGGTTCAAGGTCATCCTCCAGCCAGAGCGAAGAATTCTCAATAGCCCTTGGGGCTCTAGTAGAGCTTAGGTCAGGGTGGGACCCATGCCATGGACTCAGGATGCTGAGGAGCAGGCAGTCAGCGAGGAGCGCGCAGAGCACAGACTCCCGGCTGAAACGGGCGGGTGTGGATGGCGAGGAGCGCGCAGAGCACAGACTCCCGGCTGAAACGGGCGGGTGTGGACGGCGAGGAGTGCGCAGAGCACAGACTCCCGGCTGAAACGGGCGGGTGTGGACGGCGAGGAGCACGCAGAGCACAGACTCCCGGCTGAAATGGGTGGGTATGGGTGGGGGTGTTTGCAGGCAGGGTTCCCAGTGCCCCTCCTTCTTCTCAACCTGGGGTCCTTGCCCTTAGAGTCTGATAAGATCACTCGGATGCCTCCCAGTCTGTGGTCAGCCAGGCCCTTTCTGAGGGGCTCGGCCGCAGGCCAGCCTCCTCCAACTCGATTTCCAGAAAAACCCCCCATCAGCTACCAGGCTCCCCCAGCCCCACGGGTCCCAGCAGCTCCTGCCAGCCATGAGCCAAGACGAGTCTCCACCCAGAAGCTTTCTCCTCCTCTGCCTGTCCCGACGCCACTTCCTCATCCTTGCCCTTCTGCCAGCCCAAATGTGGGACCCACCCCAACACTGCCGGACACCACCCACCAGGACTGGGACAGCGGACAGGGGATAGGTGACCGGGCTGACACGGGGTGGAAGGAGGGCATTGAAAGCTGACGGGCAGAAGAGGCAAAGTTGTCAATTTCACTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTCATCTCTTGGCCTCCTTGGAGAAGAGGCTGCTGATTCTGGGGCTGGAGCAGGGAAAAGGCAGGTGAGCCTGGAGCGTCCCATGAGGTCAGGAAGGAAGAGGTGTTCGGAACCACCAACACATGTCAAAGGGACACAGGGGCAAACTAAAGGGGCTCCCACAGCCAAAGAAAGAAAAGAAATAGGCCAAGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCATGAGGTCAGGAGTTCCAGACCAGGCTGGTCAACATGGTGAAACCCTGTCTCTAGTAAAAATACAAAAAATTAGCCAGGCGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGAAGGCAGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCCAAGCAACAGTGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAGAATTAACAGTAGCAATAAACAAATAAATGTCCCTGGGTCCATACCGGTATAAATAAATAACTGACAAAAGAGAGTTTGGGGCTGTCTCTGCGGGCTGCATGGGGAGACAGTATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12649:HG2_PB_pbsv_10710:HG3_PB_pbsv_10451:HG2_PB_PB10Xdip_30962:HG2_PB_assemblyticsfalcon_28336:HG3_PB_assemblyticsfalcon_28273:HG2_PB_SVrefine2PBcRplusDovetail_11841:HG4_Ill_SVrefine2DISCOVARDovetail_7763:HG3_Ill_SVrefine2DISCOVARDovetail_7969:HG2_PB_SVrefine2Falcon2Bionano_5117:HG3_PB_SVrefine2PBcRDovetail_5005:HG2_PB_SVrefine2PB10Xhap12_7824:HG4_PB_SVrefine2Falcon1Dovetail_6581:HG3_PB_SVrefine2Falcon1Dovetail_6487;NumClusterSVs=14;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_7969:HG4_Ill_SVrefine2DISCOVARDovetail_7763;NumExactMatchSVs=2;ClusterMaxShiftDist=0.156199;ClusterMaxSizeDiff=0.156199;ClusterMaxEditDist=0.222258;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=3115;DistBack=16427;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=171;REFWIDENED=9:138241928-138242098;PctSeqSimilarity=0.9972;PctSizeSimilarity=0.9997;PctRecOverlap=0.9708;SizeDiff=1;StartDistance=-91;EndDistance=-91;GTMatch=0;TruScore=98;MatchId=5787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:51:0|1:37:2:0:40:./.:0:0:0:0:0/1:8:22:0/1:87:152:.:.:.
chr9	138253650	HG2_PB_SVrefine2PBcRplusDovetail_11842	A	AAGATGGATGGATGGGTGGATGTGTGGGTGAGTGGATGAATGGGTTGATGGGTAGGTGGGTGGGTGAATGGATGGAAGAGTGGGTGGGTAGGTGGATGAGTGAATGAATAGTGGGCAAATGGGTAGATGGATAGATGGATGAGTGGGTGGATGGGCGGATAGATGAATGTGTGGATGGATGAATGGGTGGATACGTGGATGGCTGGATGGGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5118:HG2_PB_PB10Xdip_30963:HG3_PB_pbsv_10452:HG2_PB_pbsv_10711:HG3_PB_SVrefine2PBcRDovetail_5006:HG2_PB_SVrefine2Falcon1plusDovetail_12650:HG4_Ill_SVrefine2DISCOVARDovetail_7764:HG3_PB_SVrefine2Falcon1Dovetail_6488:HG2_PB_SVrefine2PBcRplusDovetail_11842:HG2_PB_SVrefine2PB10Xhap12_7825;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5118:HG4_Ill_SVrefine2DISCOVARDovetail_7764:HG3_PB_SVrefine2Falcon1Dovetail_6488:HG2_PB_SVrefine2PBcRplusDovetail_11842:HG2_PB_SVrefine2PB10Xhap12_7825;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0646651;ClusterMaxSizeDiff=0.0508083;ClusterMaxEditDist=0.277136;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=211;DistBack=11552;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=535;REFWIDENED=9:138253651-138254185;PctSeqSimilarity=0.9492;PctSizeSimilarity=0.9953;PctRecOverlap=0.3756;SizeDiff=-1;StartDistance=-132;EndDistance=-132;GTMatch=0;TruScore=77;MatchId=5788.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:31:1/1:2:12:4:18:./.:0:0:0:0:1/1:1:15:./.:.:.:.:.:.
chr9	138348195	HG4_PB_HySA_15702	T	TGGAGGGTGAGGGGAGGGATGGAGGTAAGGGTGGGGGTGGAGGTGGGGGAGGGATGGAGGTGGGGGAGGGATGGAGGTGAGGGGAGGGATGGAGGTAGTGGGGATGGAGGTGAGGGTGGGGATGGAGGTGGGGGAGGGATGGAGGGGAGGGTGGGGATGGAGGGGAGGGTGGGGATGGAGGTGAGGGGGAGGGAGGGAGGTGAGGGGAGGGAGGGAGGGGAGGGGAAGGGAGGGAGGGGAGGGGAAGGGAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6494:HG2_PB_HySA_19463:HG2_PB_PB10Xdip_30972:HG4_PB_pbsv_10760:HG4_PB_HySA_15702:HG2_PB_pbsv_10716:HG2_PB_SVrefine2Falcon1plusDovetail_12654:HG4_PB_SVrefine2PBcRDovetail_5405:HG2_PB_SVrefine2PB10Xhap12_7831:HG3_PB_SVrefine2PBcRDovetail_5008:HG2_PB_SVrefine2Falcon1plusDovetail_12653:HG2_PB_SVrefine2PBcRplusDovetail_11846:HG2_PB_SVrefine2Falcon2Bionano_5122:HG3_PB_pbsv_10458;NumClusterSVs=14;ExactMatchIDs=HG4_PB_HySA_15702;NumExactMatchSVs=1;ClusterMaxShiftDist=0.169231;ClusterMaxSizeDiff=0.169231;ClusterMaxEditDist=0.294776;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=250;DistBack=-84;DistForward=-1;DistMin=-84;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=93;REFWIDENED=9:138348190-138348282;PctSeqSimilarity=0.998;PctSizeSimilarity=0.996;PctRecOverlap=0.992;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=5789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:24:0:22:./.:0:0:0:0:0/1:3:6:./.:.:.:.:.:.
chr9	138512207	HG4_PB_assemblyticsfalcon_27780	C	CCCCAATCTCCCCCGTCTCCCCCGTCTCCCCCTTCCCCCTTTTCCCCCTACTCCCCTTCTCCCCCATCTCCCCCGTCTCCCGTCTCCCCCATCTCCCCCTTCTCACCCTTCTCCCCTACTCCTCTTCTCCCCTATCCCCTTCTCCCCATCTCCCCGTCTCTCCCGTCTCCCCATCTCCCCCTTCTCCCCTTCCCCCTACTCCCCTTCTCCCCCTACTCCCGTCTCCCCCGTCTCCCCCTTCTCCCCCTTTTTCCCCTACTCCCCCTTCTCCCCCATCTCCCCCGTCTCTCCCGTCTCCCCCATCTCCCCCTTCTCACCCTTCTCCCCCTACTCCCTCTTCTCCCCGTCTCCCCCGTCTGCCCAGTCTCCCCTTCTCCCCCTTCTCTCCCTTCT	10	PASS	ClusterIDs=HG2_PB_pbsv_10719:HG3_PB_pbsv_10462:HG2_PB_assemblyticsfalcon_28348:HG4_PB_assemblyticsfalcon_27780:HG2_PB_SVrefine2Falcon1plusDovetail_12657:HG4_PB_SVrefine2Falcon1Dovetail_6586;NumClusterSVs=6;ExactMatchIDs=HG4_PB_assemblyticsfalcon_27780;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0771144;ClusterMaxSizeDiff=0.0746269;ClusterMaxEditDist=0.164649;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=392;DistBack=89;DistForward=43433;DistMin=89;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=515;REFWIDENED=9:138511696-138512210;PctSeqSimilarity=0.9803;PctSizeSimilarity=0.9469;PctRecOverlap=0.4819;SizeDiff=-22;StartDistance=204;EndDistance=204;GTMatch=0;TruScore=80;MatchId=5790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:40:0|1:15:2:5:28:./.:0:0:0:0:./.:2:0:0/1:7:6:.:.:.
chr9	138587973	HG4_Ill_150bpfermikitraw_13755	T	TGCTTCCCAGCAGACCCAGGGAGTGACCAGGATGGGGCCAAGTCCCTCTACGTCCCCAC	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_27782:HG2_PB_pbsv_10723:HG2_PB_HySA_19479:HG4_PB_HySA_15708:HG4_Ill_svaba_13548:HG4_Ill_scalpel_9964:HG4_Ill_manta_2605:HG4_Ill_GATKHC_17370:HG4_Ill_GATKHCSBGrefine_7460:HG4_Ill_250bpfermikitraw_14361:HG4_Ill_150bpfermikitraw_13755:HG2_PB_assemblyticsfalcon_28351:HG2_Ill_svaba_13457:HG2_Ill_GATKHC_17330:HG2_Ill_GATKHCSBGrefine_7297:HG2_Ill_250bpfermikitraw_14475:HG2_Ill_150bpfermikitraw_13598;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13598:HG2_Ill_250bpfermikitraw_14475:HG2_Ill_GATKHCSBGrefine_7297:HG2_Ill_GATKHC_17330:HG2_Ill_svaba_13457:HG2_PB_assemblyticsfalcon_28351:HG4_Ill_150bpfermikitraw_13755:HG4_Ill_250bpfermikitraw_14361:HG4_Ill_GATKHCSBGrefine_7460:HG4_Ill_GATKHC_17370:HG4_Ill_manta_2605:HG4_Ill_scalpel_9964:HG4_Ill_svaba_13548:HG4_PB_HySA_15708;NumExactMatchSVs=14;ClusterMaxShiftDist=0.12069;ClusterMaxSizeDiff=0.103448;ClusterMaxEditDist=0.172414;PBcalls=5;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=16066;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=157;REFWIDENED=9:138587952-138588108;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5791.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:35:0|1:22:2:1:33:./.:0:0:0:0:0/1:19:21:./.:.:.:.:.:.
chr9	138966298	HG3_Ill_MetaSV_5666	C	CAAAAAAAAAAAAAAAAATTAGCCAGGCATGGTGGGACACACCTGTCATTCCAGCTACTTGGGAGGCTGAGGGAGGAGGATCCCTTGAGCCCAGGAATTCGAGGCTGCAGTGAGCTATGATCCCACCACCACACTCTAGCCTGGGGCCACAAAGCAAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAGAAAAGAAAACAGTTCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCAAGGCGGGTGGATCATGAGGTCAGGAGAACAAGACCATATTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTGGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7845:HG3_PB_HySA_16233:HG4_PB_assemblyticsfalcon_27793:HG4_PB_pbsv_10780:HG4_Ill_GATKHCSBGrefine_7463:HG4_PB_SVrefine2Falcon1Dovetail_6595:HG4_Ill_MetaSV_5738:HG3_Ill_MetaSV_5666:HG3_PB_pbsv_10476:HG2_PB_pbsv_10734:HG2_PB_PB10Xdip_30988:HG2_PB_HySA_19496:HG4_PB_HySA_15723:HG2_PB_SVrefine2Falcon1plusDovetail_12664:HG3_PB_SVrefine2PBcRDovetail_5018:HG3_PB_SVrefine2Falcon1Dovetail_6508:HG3_Ill_SVrefine2DISCOVARDovetail_7976:HG2_PB_SVrefine2Falcon2Bionano_5134:HG2_PB_SVrefine2PBcRplusDovetail_11858:HG4_PB_SVrefine2PBcRDovetail_5415;NumClusterSVs=20;ExactMatchIDs=HG3_Ill_MetaSV_5666:HG4_Ill_MetaSV_5738;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0536082;ClusterMaxSizeDiff=0.0412371;ClusterMaxEditDist=0.218557;PBcalls=16;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=480;DistBack=-17;DistForward=8189;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=297;REFWIDENED=9:138966020-138966316;PctSeqSimilarity=0.999;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=5795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:73:1/1:0:24:1:40:./.:0:0:0:0:1/1:0:24:./.:5:71:.:.:.
chr9	138991603	HG2_PB_HySA_19497	G	GGGGGGTTGTGTGTGGGGTGGCGGGGTGGGTGTTTGTGCGGGGCGGCGCGGGGGTGTGCGAGTCGGCCTGT	10	PASS	ClusterIDs=HG4_PB_HySA_15724:HG3_PB_pbsv_10477:HG2_PB_assemblyticsfalcon_28364:HG2_PB_PB10Xdip_30989:HG4_PB_pbsv_10781:HG2_PB_HySA_19497:HG3_PB_HySA_16234;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_19497;NumExactMatchSVs=1;ClusterMaxShiftDist=0.100719;ClusterMaxSizeDiff=0.100719;ClusterMaxEditDist=0.177778;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=70;DistBack=1;DistForward=18;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=163;REFWIDENED=9:138991465-138991627;PctSeqSimilarity=0.9931;PctSizeSimilarity=0.9859;PctRecOverlap=0.9859;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=98;MatchId=5796.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:31:1/1:2:16:0:15:./.:0:0:0:0:./.:0:5:./.:.:.:.:.:.
chr9	138993708	HG4_PB_SVrefine2PBcRDovetail_5416	G	GACGGACACAGGGCCTTTGCACCGCTGACGCACACCGCACCCCCGACGACCAGGGCCTTTGCACCCGCTGACGGACACAGGCCTTTGCACCCGCTGACGGACACAGGGCCTTTGCACCCTGGGACCGCAGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12665:HG4_PB_assemblyticsfalcon_27796:HG4_PB_SVrefine2Falcon1Dovetail_6596:HG2_PB_SVrefine2Falcon2Bionano_5135:HG2_PB_SVrefine2PBcRplusDovetail_11860:HG4_PB_SVrefine2PBcRDovetail_5416:HG4_PB_pbsv_10784:HG4_PB_pbsv_10783:HG2_PB_pbsv_10736;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_5416;NumExactMatchSVs=1;ClusterMaxShiftDist=0.270627;ClusterMaxSizeDiff=0.270627;ClusterMaxEditDist=0.343234;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=130;DistBack=0;DistForward=1661;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=402;REFWIDENED=9:138993307-138993708;PctSeqSimilarity=0.8885;PctSizeSimilarity=0.8025;PctRecOverlap=0.8037;SizeDiff=-32;StartDistance=1;EndDistance=1;GTMatch=1;TruScore=83;MatchId=5797.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:8:32:1/1:4:14:0:15:./.:0:0:0:0:0/0:20:0:./.:.:.:.:.:.
chr9	139151148	HG2_Ill_150bpfermikitraw_13611	G	GGGGGGAGGGTACCAAGATGAAGATCAAGTCACAGATTGGCAGAATGTTGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5140:HG2_PB_HySA_19514:HG3_Ill_GATKHC_17288:HG2_Ill_GATKHC_17351:HG2_Ill_250bpfermikitraw_14487:HG2_Ill_150bpfermikitraw_13611:HG3_Ill_svaba_13624:HG2_Ill_svaba_13479:HG4_PB_assemblyticsfalcon_27806:HG2_PB_pbsv_10743;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13611:HG2_Ill_250bpfermikitraw_14487:HG2_Ill_GATKHC_17351:HG3_Ill_GATKHC_17288;NumExactMatchSVs=4;ClusterMaxShiftDist=0.138614;ClusterMaxSizeDiff=0.138614;ClusterMaxEditDist=0.190476;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=29;DistForward=72281;DistMin=29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=95;REFWIDENED=9:139151059-139151153;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5798.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:36:0|1:35:2:3:37:./.:0:0:0:0:0/1:16:6:./.:.:.:.:.:.
chr9	139297829	HG3_PB_pbsv_10486	A	AAAAAGGGACAGGGGGTTCCAGGGGAGCAAGGGTGGGGTTTTGCCGGCGGGAG	20	PASS	ClusterIDs=HG3_Ill_GATKHC_17290:HG4_PB_HySA_15740:HG3_PB_pbsv_10486:HG2_PB_assemblyticsfalcon_28378;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_10486;NumExactMatchSVs=1;ClusterMaxShiftDist=0.161616;ClusterMaxSizeDiff=0.141414;ClusterMaxEditDist=0.313726;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=-40;DistForward=42;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=9:139297828-139297832;PctSeqSimilarity=0.7788;PctSizeSimilarity=0.5474;PctRecOverlap=0.4211;SizeDiff=-43;StartDistance=34;EndDistance=34;GTMatch=1;TruScore=58;MatchId=5799.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:38:1/1:3:24:2:17:./.:0:0:0:0:./.:5:0:./.:.:.:.:.:.
chr9	139650167	HG4_Ill_250bpfermikitraw_14390	G	GAACAGCATGGGGAACAGTGCAGGGAACCCTGCAGGGAACAGCATGGGGAACGGTGCAGGA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_14498:HG4_PB_pbsv_10804:HG4_PB_HySA_15760:HG4_Ill_250bpfermikitraw_14390:HG4_Ill_150bpfermikitraw_13778;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14498:HG4_Ill_250bpfermikitraw_14390:HG4_Ill_150bpfermikitraw_13778;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0661157;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.132231;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=7925;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=359;REFWIDENED=9:139650160-139650518;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5800.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:0|1:25:2:1:24:./.:0:0:0:0:0/1:18:7:./.:.:.:.:.:.
chr9	139928726	HG4_PB_SVrefine2Falcon1Dovetail_6615	G	GGGAGGGGGGCTGGAGGGAGGGGGACTTGGAGGGAGGGGGCTTGGGAGGGGGGCTGGAGAGAGGGGGTTTGGAGGGAGGGGGGCTGGAGGGAGGGGCTTGGAGGGAGGGGTTTGGGGAGGCTAAAGGGAGGGGAACTTGGAAGGAGGGGGGTTTGGAGGGAGAGGGGTTTGGAGGGAGGGTGGCTTGGAGGGAGGGGGTTTGGAGGGAGGGGGCTTGGAGAGAGGGGGGTTTGGAGGGAGGGGCTGGAGGGAGGGGAGCTTGGAGGGGAGCTTGGAGGGGGTTCGGAGGGGGGCTTGGAGGGAGGGGAGTTTGGAGGGGGGAGCTTGGAGGGAGGGGGGTTTAGAGGGAGGGAGCTGGAGGGAGGGGAGCTTGGAGGGGCTTGGAGGGAGGGGTTCGGAGGGGGACTTGGAGGGAGGGGGCTTGGAGGGAGGGGGCTTGGAGGGAGGGGGCTTGGAGGGAGGGGAGTTTGGAGGGAGGGGGCTGGAGGGAGGGGAGCTTGGTGGGGAGCTTGGAGGGAGGGGAGCTTGGAAGGAGGGGGGTTTGGAGGGAGGGGGTTTGGAGGGAGGGCGGCTTGGAGGGAGGGGGTTTGGAGGGGGGCTTGGAGAGGGGGGTTTGGAAGGAGGGGACGAGGGAGGGGAGCTTGGAGGGGAGCTTGGAGGGAGGGGGTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5154:HG3_PB_pbsv_10508:HG2_PB_pbsv_10767:HG2_PB_PB10Xdip_31027:HG2_PB_HySA_19559:HG4_PB_pbsv_10812:HG4_PB_SVrefine2Falcon1Dovetail_6615:HG2_PB_SVrefine2PB10Xhap12_7867:HG3_PB_SVrefine2PBcRDovetail_5034:HG2_PB_SVrefine2PBcRplusDovetail_11877:HG3_PB_SVrefine2Falcon1Dovetail_6531:HG2_PB_SVrefine2Falcon1plusDovetail_12684;NumClusterSVs=12;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_6615;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0424908;ClusterMaxSizeDiff=0.03663;ClusterMaxEditDist=0.229868;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=669;DistBack=56413;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=82;REFWIDENED=9:139928727-139928808;PctSeqSimilarity=0.9825;PctSizeSimilarity=0.9696;PctRecOverlap=0.8944;SizeDiff=-21;StartDistance=-62;EndDistance=-62;GTMatch=1;TruScore=94;MatchId=5802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:1:9:0:11:./.:0:0:0:0:./.:0:0:0/1:3:23:.:1979:.
chr9	139944496	HG2_PB_SVrefine2Falcon2Bionano_5155	T	CGCCACCCGCCTGCCCCTACTCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACTCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGCCCTTACCCACGACAAAGTTCCCAGCCACCCGCCTATCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGCCCCTACTCGCGACAAAGTTCCCAGCCACCCGCCTGCCCCTACTCACGACAAAGTTCCCAGCCACCCGCCTATCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGCCCCTACCCACGACAAAGTTCCCAGCCACCTGCCTGCCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGCCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGCCCCTACTCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACTCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTATCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGCCCTTACCCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGCCCTTACCCACGACAAAGTTCCCAGCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGCCCTTACCCACGACAAAGTTCCCAGCCACCCGCCTATCCCTACCCACGACAAAGTTCCCAGCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACCCACGACAAAGTTCCCAGCCACCCGCCTGCCCTTACCCACGACAAAGTTCCCAGCCACCCGCCTGTCCCTACCCACGACAAAGTTCCCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6616:HG2_PB_SVrefine2Falcon1plusDovetail_12685:HG2_PB_pbsv_10768:HG4_PB_pbsv_10813:HG2_PB_SVrefine2Falcon2Bionano_5155:HG3_PB_SVrefine2Falcon1Dovetail_6532;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5155;NumExactMatchSVs=1;ClusterMaxShiftDist=0.160322;ClusterMaxSizeDiff=0.160322;ClusterMaxEditDist=0.242211;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1042;DistBack=7475;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=228;REFWIDENED=9:139944497-139944724;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9981;PctRecOverlap=0.9799;SizeDiff=-2;StartDistance=-20;EndDistance=-20;GTMatch=0;TruScore=99;MatchId=5803.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:32:0|1:30:2:2:21:./.:0:0:0:0:0/1:11:6:0/1:35:21:.:1979:.
chr9	140005717	HG3_Ill_Spiral_11341	C	CAGGCGAGGGGCCTGTGATCCCAGCACTCTGAGGGTGAGACGGCAGCAGGGTAGAGGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7870:HG3_PB_assemblyticsfalcon_28351:HG2_PB_pbsv_10771:HG3_PB_pbsv_10510:HG4_PB_HySA_15782:HG4_Ill_GATKHC_17425:HG3_Ill_Spiral_11341:HG3_Ill_GATKHC_17318:HG3_Ill_150bpfermikitraw_13665:HG2_PB_assemblyticsfalcon_28413:HG2_Ill_GATKHC_17387:HG2_Ill_GATKHCSBGrefine_7311:HG3_PB_HySA_16288:HG2_PB_HySA_19566:HG2_PB_PB10Xdip_31031:HG3_PB_SVrefine2PBcRDovetail_5036:HG2_PB_SVrefine2PBcRplusDovetail_11879;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7311:HG2_Ill_GATKHC_17387:HG2_PB_assemblyticsfalcon_28413:HG3_Ill_150bpfermikitraw_13665:HG3_Ill_GATKHC_17318:HG3_Ill_Spiral_11341:HG4_Ill_GATKHC_17425;NumExactMatchSVs=7;ClusterMaxShiftDist=0.10084;ClusterMaxSizeDiff=0.0840336;ClusterMaxEditDist=0.316667;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=57;DistBack=5905;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=281;REFWIDENED=9:140005583-140005863;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5804.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:24:0|1:12:3:3:23:./.:0:0:0:0:0/0:13:1:./.:.:.:.:.:.
chr9	140240977	HG3_Ill_250bpfermikitraw_14120	G	GACCAGCATCCCACTTCTATTTCCGAACCTTCGACACTTTTAATGTCCGTATTTCCACAGATGGTCAGTTTCAGCTGCATTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12694:HG3_PB_pbsv_10519:HG3_PB_assemblyticsfalcon_28360:HG2_PB_pbsv_10780:HG4_Ill_Krunchall_15111:HG4_PB_pbsv_10823:HG4_Ill_250bpfermikitraw_14408:HG4_Ill_150bpfermikitraw_13801:HG3_Ill_250bpfermikitraw_14120:HG3_Ill_150bpfermikitraw_13671:HG2_Ill_Krunchall_14844:HG2_Ill_250bpfermikitraw_14517:HG2_Ill_150bpfermikitraw_13636:HG3_PB_HySA_16296:HG4_PB_SVrefine2Falcon1Dovetail_6626:HG4_PB_SVrefine2PBcRDovetail_5432:HG4_Ill_SVrefine2DISCOVARDovetail_7782:HG2_PB_SVrefine2Falcon2Bionano_5161;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13636:HG2_Ill_250bpfermikitraw_14517:HG2_Ill_Krunchall_14844:HG3_Ill_150bpfermikitraw_13671:HG3_Ill_250bpfermikitraw_14120:HG4_Ill_150bpfermikitraw_13801:HG4_Ill_250bpfermikitraw_14408:HG4_Ill_Krunchall_15111;NumExactMatchSVs=8;ClusterMaxShiftDist=0.118343;ClusterMaxSizeDiff=0.106509;ClusterMaxEditDist=0.265896;PBcalls=9;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=81;DistBack=1;DistForward=153;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=168;REFWIDENED=9:140240963-140241130;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5806.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:40:1/1:0:14:2:28:./.:0:0:0:0:0/1:7:24:./.:.:.:.:12107:.
chr9	140273293	HG2_PB_SVrefine2Falcon2Bionano_5165	A	AAGGGGAATGGGGCGTCTGTGTGAGGGGTACAGGGTTTGTGGGTGACGGTGACCGTTGCCTGGGGCCGAGGGGAATGGGGCATCTGTGTGAGGGGTACGGGGTTTGTGGGTGACGGTGACCATTGCCTGGGGCCGAGGGGAATGGGGCATCTGTGTGAGGGGTACAAGGTTCGTGGGTGACGGTGACCGTTGCCTGGGGCCGAGGGGAATGGGGCGTCTGTGTGAGGGGTACGGGGTTTGTGGGTGACGGTGACCATTGCCTGTGGCCGAGGGGAATGGGGCATCTGTGTGAGGGGTACAGGGTTTGTGGGTGACGGTGACCGTTGCCTGGGGCCGAGGGGAATGGGGGCGTCTGTGTGAGGGGTACGGGGTTTGTGGGTGACGGTGACCGTTGCCTGGGGCCGAGGGGAATGGGGCGTCTGTGTGAGGGGTACGGGGTTCGTGGGTGACGGTGACCGTTGCCTGGGGCCGAGGGGAATGGGGGCGTCTGTGTGAGGGGTACAGGGTTCGTGGGTGACGGTGACCATTGCCTGGGGCCGAGGGGAATGGGGCGTCTGTGTGAGGGGTACGGGGTTCGTGGGTGACGGTGACCGTTGCCTGGGGCCGAGGGGAATGGGGGCGTCTGTGTGAGGGGTACGGGGTTTGTGGGTGACAGTGACCGTTGCCTGGGGCCGAGGGGAATGGGGCATCTGTGTGAGGGGTACGGGGTTTGTGGGTGACGGTGACCATTGCCTGGGGCTGAGGGGAATGGGGCGTCTGTTTGAGGGGTACGGGGTTTGTGGGTGACGGCGACTGGGGCCTGGGGCCGAGGGGAATAGGGGCGTCTGTGTGAGGGGTACGGGGTTTGTGGGTGACGGTGACCGTTGCCTGGGGCCGAGGGGAATGGGGGCGTCTGTGTGAGGGGTACAGGGTTTGTGGGTGATGGTGACCGTTGCCTGGGGCCGAGGGGAATGGGGCATCTGTGTGAGGGGTACAGGGTTTGTGGGTGACGGTGACCGTTGCCTGGGGCCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12699:HG4_PB_pbsv_10827:HG2_PB_pbsv_10784:HG4_PB_SVrefine2Falcon1Dovetail_6628:HG2_PB_HySA_19581:HG2_PB_PB10Xdip_31045:HG3_PB_SVrefine2Falcon1Dovetail_6540:HG2_PB_SVrefine2PB10Xhap12_7876:HG2_PB_SVrefine2Falcon2Bionano_5165:HG2_PB_SVrefine2PBcRplusDovetail_11889;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5165:HG2_PB_SVrefine2PB10Xhap12_7876;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0920215;ClusterMaxSizeDiff=0.0910426;ClusterMaxEditDist=0.181287;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1010;DistBack=31;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=711;REFWIDENED=9:140273294-140274004;PctSeqSimilarity=0.9875;PctSizeSimilarity=1;PctRecOverlap=0.6123;SizeDiff=0;StartDistance=-392;EndDistance=-392;GTMatch=0;TruScore=86;MatchId=5808.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:1:16:0:16:./.:0:0:0:0:./.:0:0:0/1:12:46:.:.:.
chr9	140619266	HG2_PB_SVrefine2Falcon2Bionano_5171	T	TGGCATTCGTGTGGTAGACTTGTGGCATTCGTGTGGCAGACGTGTGGCATTCGTGGGGCAGACGTGTGGCATTCGTGGGACAGATGTGGCATTCGTTGGGCATTCGTGTGGCAGGCTTGTGGCATTCGTGGGGCAGGCGTGTGGCATTCATGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5171:HG2_PB_HySA_19594:HG4_PB_pbsv_10834:HG4_PB_SVrefine2Falcon1Dovetail_6635;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5171:HG4_PB_SVrefine2Falcon1Dovetail_6635;NumExactMatchSVs=2;ClusterMaxShiftDist=0.1571;ClusterMaxSizeDiff=0.151057;ClusterMaxEditDist=0.320242;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=152;DistBack=3459;DistForward=82;DistMin=82;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=500;REFWIDENED=9:140619267-140619766;PctSeqSimilarity=0.9489;PctSizeSimilarity=0.95;PctRecOverlap=0.1863;SizeDiff=-8;StartDistance=-127;EndDistance=-127;GTMatch=0;TruScore=69;MatchId=5809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:10:14:1|0:1:7:20:1:./.:0:0:0:0:0/0:12:0:./.:.:.:.:.:.
chr9	140816379	HG3_Ill_250bpfermikitraw_14126	G	GTCAGCACCACGGCCGCGCAGCATCCTGGGAGCAGAGTAAAGCGTTCGGAGAACATGA	20	PASS	ClusterIDs=HG3_PB_pbsv_10551:HG4_PB_HySA_15815:HG2_PB_pbsv_10806:HG2_PB_PB10Xdip_31105:HG4_PB_pbsv_10842:HG2_PB_assemblyticsfalcon_28446:HG3_Ill_GATKHC_17342:HG3_Ill_250bpfermikitraw_14126:HG2_Ill_250bpfermikitraw_14524:HG3_PB_HySA_16331:HG2_Ill_GATKHC_17405;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14524:HG3_Ill_250bpfermikitraw_14126:HG3_Ill_GATKHC_17342;NumExactMatchSVs=3;ClusterMaxShiftDist=0.184874;ClusterMaxSizeDiff=0.184874;ClusterMaxEditDist=0.256;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=19;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=11;REFWIDENED=9:140816378-140816391;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:2:43:1:5:./.:0:0:0:0:0/1:3:6:./.:.:.:.:.:.
chr9	140843417	HG4_PB_SVrefine2Falcon1Dovetail_6643	A	ATGGTGTGTGTCTGTTGTGTGTCTGGTGTTTGGTGTGTGTATGTGTGTTTTGTGTGTGTGGTGTATACGTGTGTGGTGTGTGTGTGGGTGTGAAGTATGTGTGTAGTGTGTGTGGTGTGTGTGTGGTGTGTGCATGTTTGTGGTGGCTGTGTGTCCAGTGTGTGTGTGTGTGGTGTATCTGTGTCTGATGTGTGTGGTGTGTGCACGTCTGGCATATGTGGTGTGTGTGTGGTGTGTGGGTGTGTGGGTGTGTGTGGTGTGGTGCATGTGTGTATCTGGTGTGTGCGCTTGTGTGTCCTTTGTGTGTGGTGTACATATGGTGTGCATGTAGTGTGTGTGTGTTTGGTGTTTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13908:HG2_PB_PB10Xdip_31106:HG2_PB_pbsv_10807:HG3_PB_HySA_16332:HG2_PB_HySA_19608:HG3_PB_pbsv_10552:HG4_PB_pbsv_10843:HG3_PB_SVrefine2Falcon1Dovetail_6559:HG4_PB_SVrefine2PBcRDovetail_5441:HG4_PB_SVrefine2Falcon1Dovetail_6643:HG4_Ill_SVrefine2DISCOVARDovetail_7791:HG3_PB_SVrefine2PBcRDovetail_5053:HG3_Ill_SVrefine2DISCOVARDovetail_7991:HG2_PB_SVrefine2PB10Xhap12_7893:HG2_PB_SVrefine2Falcon2Bionano_5174:HG2_PB_SVrefine2Falcon1plusDovetail_12711;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13908:HG4_PB_SVrefine2PBcRDovetail_5441:HG4_PB_SVrefine2Falcon1Dovetail_6643:HG4_Ill_SVrefine2DISCOVARDovetail_7791:HG3_PB_SVrefine2PBcRDovetail_5053:HG3_Ill_SVrefine2DISCOVARDovetail_7991:HG2_PB_SVrefine2PB10Xhap12_7893:HG2_PB_SVrefine2Falcon2Bionano_5174:HG2_PB_SVrefine2Falcon1plusDovetail_12711;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0608575;ClusterMaxSizeDiff=0.0580913;ClusterMaxEditDist=0.227778;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=351;DistBack=9113;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=266;REFWIDENED=9:140843418-140843683;PctSeqSimilarity=0.9576;PctSizeSimilarity=0.9943;PctRecOverlap=0.4929;SizeDiff=-2;StartDistance=-178;EndDistance=-178;GTMatch=0;TruScore=81;MatchId=5811.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:56:1/1:3:17:0:26:./.:0:0:0:0:./.:0:1:1/1:1:47:.:.:.
chr10	440404	HG4_Ill_GATKHCSBGrefine_7485	T	TCTGCCGTGTGCTGAACCGGAAGGACATTATGGCACACAGTGGGCACTATTCAGCCTTCAGGGAGGAGGGAAGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3485:HG2_PB_pbsv_10824:HG2_PB_HySA_19634:HG4_PB_pbsv_10857:HG2_PB_HySA_19633:HG4_PB_HySA_15854:HG4_Ill_GATKHC_17463:HG4_Ill_GATKHCSBGrefine_7485:HG4_Ill_250bpfermikitraw_14422:HG4_Ill_150bpfermikitraw_13816:HG2_Ill_scalpel_10278:HG2_Ill_GATKHCSBGrefine_7318:HG2_Ill_250bpfermikitraw_14531:HG2_Ill_150bpfermikitraw_13646:HG2_PB_PB10Xdip_3486;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13646:HG2_Ill_250bpfermikitraw_14531:HG2_Ill_GATKHCSBGrefine_7318:HG2_Ill_scalpel_10278:HG4_Ill_150bpfermikitraw_13816:HG4_Ill_250bpfermikitraw_14422:HG4_Ill_GATKHCSBGrefine_7485:HG4_Ill_GATKHC_17463;NumExactMatchSVs=8;ClusterMaxShiftDist=0.10596;ClusterMaxSizeDiff=0.0927152;ClusterMaxEditDist=0.298701;PBcalls=7;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=126;DistForward=20;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=788;REFWIDENED=10:440147-440934;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=462.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:0|1:23:4:1:18:1|0:0:6:7:0:0/1:12:5:./.:.:.:.:.:.
chr10	493076	HG2_PB_SVrefine2PB10Xhap12_7912	G	GTCACACACAGTGGGGCAGCAGGACCCACTCACCCCTGTCGATACTCAGGATCACACACAGTGGAGCAGCAGGACCCACTCATCCCCATCTATACTCAGGATCACACACAGTGGGGCAGTAGGACCCAATCACCCCCGTCGATATTCAGGATCACACACAGTGGGGCAGCAGGACCCACTCACCCCTGTCGATATTCAGGATCACACACAGTGGGGCAGCAGGACCCACTCACCCCTGTCGATACTCAGGATCACACACAGTGGGGCAGCAGGACCCACTCATCCCCATCTATACTCAGGATCACACACAGTGGGGCAGCAGGACCCGCTCACTCCCATCGATACTCAGGATCACACACAGTGGGGCAGCAGGACCCGCTCACTCCCATCAATACTCAGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7912:HG2_PB_pbsv_10829:HG2_PB_HySA_19639:HG4_PB_HySA_15860:HG2_PB_PB10Xdip_3499:HG4_PB_SVrefine2Falcon1Dovetail_6658:HG2_PB_SVrefine2Falcon1plusDovetail_999:HG2_PB_SVrefine2PBcRplusDovetail_963;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7912:HG2_PB_SVrefine2PBcRplusDovetail_963;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0485313;ClusterMaxSizeDiff=0.0485313;ClusterMaxEditDist=0.205392;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=400;DistBack=-1;DistForward=578;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2097;REFWIDENED=10:493077-495173;PctSeqSimilarity=0.9896;PctSizeSimilarity=0.995;PctRecOverlap=0.5561;SizeDiff=2;StartDistance=-177;EndDistance=-177;GTMatch=0;TruScore=84;MatchId=463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:31:./.:9:16:10:7:./.:1:10:1:2:./.:1:0:./.:1:2:.:.:.
chr10	601982	HG2_PB_SVrefine2PB10Xhap12_7920	G	GCACCCACCTCTCCCACAATCGGATCCCAGGACAGCACCCACCCACCCCCCCTTCCATAGCCGGATCCCCGGACAGCAACCACCCACCCCCTTCCACAGCCGGATCCGAGGACGGCACCCACCCCTCCCACAGCCGGATCCCAGGACAGCACCCACCCACCCCTCCCACAGCCGGATCCCAGGACAGCACCCACCCACCCCCTCCCACAGCCGGATCCGAGGACAGCACCCACCCCTCCCACAGCCGGATCCCAGGACAGCACCCACCCACCCCTCCCACAGCCGGATCCCAGGACAGCACCCACCCACCCCTCCCACAGCCGGATCCCAGGACAGCACC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1004:HG2_PB_pbsv_10838:HG3_PB_pbsv_10580:HG3_PB_SVrefine2Falcon1Dovetail_6581:HG3_PB_SVrefine2PBcRDovetail_5067:HG2_PB_SVrefine2PBcRplusDovetail_967:HG2_PB_SVrefine2PB10Xhap12_7920:HG2_PB_SVrefine2Falcon2Bionano_5185;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5185:HG2_PB_SVrefine2PB10Xhap12_7920:HG2_PB_SVrefine2PBcRplusDovetail_967:HG3_PB_SVrefine2PBcRDovetail_5067;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0667634;ClusterMaxSizeDiff=0.0609579;ClusterMaxEditDist=0.222543;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=339;DistBack=-258;DistForward=-1;DistMin=-258;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=309;REFWIDENED=10:601983-602291;PctSeqSimilarity=0.9738;PctSizeSimilarity=0.9912;PctRecOverlap=0.531;SizeDiff=3;StartDistance=-158;EndDistance=-158;GTMatch=1;TruScore=83;MatchId=464.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:1:21:1:18:./.:2:2:1:3:./.:0:0:1/1:1:8:.:941:.
chr10	685021	HG2_PB_SVrefine2PBcRplusDovetail_970	G	GCACAAGGGGACCCGTCAGGTCGGGAGGATGCTGCCCGGCTCACAGTCCACACATGGGGACGCGTCAGGTCGGGAGGGTGCTGCCCGGCTCACGGTCCACACATGGGGACGCGTCAGGTCGGGAGGGTGCTGCCCGGCTCACGGTCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1007:HG4_PB_assemblyticsfalcon_2122:HG4_PB_SVrefine2Falcon1Dovetail_6663:HG2_PB_PB10Xdip_4567:HG4_PB_pbsv_10874:HG3_PB_HySA_16362:HG2_PB_HySA_19651:HG2_PB_pbsv_10841:HG4_PB_SVrefine2PBcRDovetail_5459:HG3_PB_SVrefine2PBcRDovetail_5068:HG3_PB_SVrefine2Falcon1Dovetail_6584:HG2_PB_SVrefine2PBcRplusDovetail_970:HG2_PB_SVrefine2PB10Xhap12_7923:HG2_PB_SVrefine2Falcon2Bionano_5188;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1007:HG4_PB_SVrefine2PBcRDovetail_5459:HG3_PB_SVrefine2PBcRDovetail_5068:HG3_PB_SVrefine2Falcon1Dovetail_6584:HG2_PB_SVrefine2PBcRplusDovetail_970:HG2_PB_SVrefine2PB10Xhap12_7923:HG2_PB_SVrefine2Falcon2Bionano_5188;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0660066;ClusterMaxSizeDiff=0.0594059;ClusterMaxEditDist=0.255738;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=147;DistBack=6217;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=432;REFWIDENED=10:685022-685453;PctSeqSimilarity=0.9896;PctSizeSimilarity=1;PctRecOverlap=0.7007;SizeDiff=0;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=89;MatchId=465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:0:14:0:10:./.:1:1:1:2:1/1:1:15:./.:.:.:.:.:.
chr10	812272	HG2_PB_pbsv_10858	T	TATGATCGATTACAGCGTGTGGCATATACTCATAGTATCCCACGTTGATTCATTACATGTGCCGCATTATACTCATAGTTATCCCCAC	10	PASS	ClusterIDs=HG2_PB_HySA_19668:HG2_PB_pbsv_10858:HG3_PB_HySA_16379:HG3_PB_pbsv_10595;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_10858;NumExactMatchSVs=1;ClusterMaxShiftDist=0.131737;ClusterMaxSizeDiff=0.107784;ClusterMaxEditDist=0.232558;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=87;DistBack=52;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=842;REFWIDENED=10:812020-812861;PctSeqSimilarity=0.9406;PctSizeSimilarity=0.9195;PctRecOverlap=0.6782;SizeDiff=7;StartDistance=25;EndDistance=25;GTMatch=0;TruScore=84;MatchId=467.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:./.:18:5:7:17:./.:5:0:8:0:0/0:23:0:./.:.:.:.:3109:.
chr10	1219992	HG2_PB_SVrefine2Falcon1plusDovetail_1025	T	TAGAGCTGTGGGCTCATGGTCTATGGAGAAGCCATGTCTTCAGGACAGAGATGGGTGTATGTGGTCTATGGAGAGACCACATCCTCAGGACAGAGCTGTGTGCTCCTGGTCTACAAAGGGGCCACGCCCTCAAGACAGAGCTGTGTGCTCATGGTCTACGGAGGGGCCATGTCCTCAGGACAGAGATGGGTGTATGTGGTCTATGGAGGGGCCACGTCCTCAGGACAGAGATGGGTGTATGTGGTCTATGGAGAGACCACATCCTCAGGACAGAGCTGTGTGCTCCTGGTCTACAAAGGGGCCACGCCCTCAAGAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7676:HG2_PB_PB10Xdip_4623:HG2_PB_pbsv_10883:HG2_PB_PB10Xdip_4622:HG3_PB_pbsv_10612:HG3_Ill_SVrefine2DISCOVARDovetail_8007:HG2_PB_SVrefine2PBcRplusDovetail_989:HG2_PB_SVrefine2PB10Xhap12_7947:HG2_PB_SVrefine2Falcon2Bionano_5205:HG2_PB_SVrefine2Falcon1plusDovetail_1025:HG2_Ill_SVrefine2DISCOVARplusDovetail_1136:HG4_PB_SVrefine2Falcon1Dovetail_6679:HG3_PB_SVrefine2Falcon1Dovetail_6598;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1136:HG2_PB_SVrefine2Falcon1plusDovetail_1025:HG2_PB_SVrefine2Falcon2Bionano_5205:HG2_PB_SVrefine2PB10Xhap12_7947:HG2_PB_SVrefine2PBcRplusDovetail_989:HG3_Ill_SVrefine2DISCOVARDovetail_8007;NumExactMatchSVs=6;ClusterMaxShiftDist=0.121581;ClusterMaxSizeDiff=0.121581;ClusterMaxEditDist=0.255319;PBcalls=10;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=315;DistBack=4219;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=290;REFWIDENED=10:1219993-1220282;PctSeqSimilarity=0.9744;PctSizeSimilarity=0.9937;PctRecOverlap=0.5714;SizeDiff=2;StartDistance=-134;EndDistance=-134;GTMatch=0;TruScore=84;MatchId=470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:0:18:1:20:1/1:1:8:1:20:./.:1:17:1/1:2:21:.:.:.
chr10	1275635	HG4_Ill_MetaSV_452	C	CATGTGCTTGTGTTTGTGCACACATGTGCTTATGTATGTGTGTGTATGTGCAGATGTGCTTATGTACGTTTGTGTGTGCACACGTGCTTATGTACATGTGTTTGCGTGCACATGTGCTTATGTCTGTGCACATGTGCATGTGTGTGCACAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7680:HG4_Ill_Cortex_308:HG3_Ill_Cortex_327:HG2_Ill_Cortex_670:HG2_PB_pbsv_10890:HG2_PB_PB10Xdip_4629:HG2_PB_PB10Xdip_4628:HG4_Ill_svaba_13658:HG4_Ill_manta_2613:HG4_Ill_MetaSV_452:HG4_Ill_GATKHCSBGrefine_7512:HG3_Ill_svaba_13712:HG3_Ill_manta_2511:HG3_Ill_Spiral_11375:HG3_Ill_GATKHCSBGrefine_7248:HG2_PB_SVrefine2Falcon1plusDovetail_1030:HG2_Ill_svaba_13571:HG2_Ill_manta_3069:HG2_Ill_SpiralSDKrefine_1413:HG2_Ill_SVrefine2DISCOVARplusDovetail_1139:HG2_Ill_MetaSV_433:HG2_Ill_GATKHCSBGrefine_7330:HG2_Ill_250bpfermikitraw_14552:HG2_Ill_150bpfermikitraw_13664:HG4_PB_pbsv_10909:HG3_PB_pbsv_10620:HG3_Ill_SVrefine2DISCOVARDovetail_8008:HG2_PB_SVrefine2PBcRplusDovetail_992:HG2_PB_SVrefine2PB10Xhap12_7952:HG2_PB_SVrefine2Falcon2Bionano_5208:HG2_PB_SVrefine2Falcon1plusDovetail_1029:HG2_Ill_SVrefine2DISCOVARplusDovetail_1138;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13664:HG2_Ill_250bpfermikitraw_14552:HG2_Ill_GATKHCSBGrefine_7330:HG2_Ill_MetaSV_433:HG2_Ill_SVrefine2DISCOVARplusDovetail_1139:HG2_Ill_SpiralSDKrefine_1413:HG2_Ill_manta_3069:HG2_Ill_svaba_13571:HG2_PB_SVrefine2Falcon1plusDovetail_1030:HG3_Ill_GATKHCSBGrefine_7248:HG3_Ill_Spiral_11375:HG3_Ill_manta_2511:HG3_Ill_svaba_13712:HG4_Ill_GATKHCSBGrefine_7512:HG4_Ill_MetaSV_452:HG4_Ill_manta_2613:HG4_Ill_svaba_13658;NumExactMatchSVs=17;ClusterMaxShiftDist=0.102236;ClusterMaxSizeDiff=0.0897436;ClusterMaxEditDist=0.213836;PBcalls=10;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=150;DistBack=2;DistForward=10;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=30;REFWIDENED=10:1275618-1275647;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=471.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:./.:0:0:0:0:./.:0:0:0:0:1/1:0:27:./.:.:.:.:.:.
chr10	1292090	HG2_PB_PB10Xdip_4678	T	AAAAATCCTATTGAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_4678:HG3_PB_HySA_16411:HG3_PB_pbsv_10621:HG3_PB_SVrefine2PBcRDovetail_5083:HG3_PB_HySA_16410:HG4_PB_SVrefine2Falcon1Dovetail_6681:HG2_PB_HySA_19697:HG2_PB_pbsv_10891:HG2_Ill_breakscan11_4126:HG2_PB_SVrefine2Falcon2Bionano_5210:HG2_PB_SVrefine2Falcon1plusDovetail_1033:HG2_PB_SVrefine2PBcRplusDovetail_994:HG2_PB_SVrefine2PB10Xhap12_7954:HG2_10X_SVrefine210Xhap12_7681:HG3_PB_SVrefine2PBcRDovetail_5082:HG2_PB_PB10Xdip_4679;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_4678:HG2_PB_PB10Xdip_4679;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0923994;ClusterMaxSizeDiff=0.0923994;ClusterMaxEditDist=0.15919;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=331;DistBack=9658;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:1292091-1292089;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:./.:0:0:0:0:./.:0:0:0:0:0/1:2:14:1/1:1:72:.:.:.
chr10	1382260	HG4_PB_SVrefine2PBcRDovetail_5475	A	AGCACCCACCAGAGAACCACGTGCCCCACAGCGGCAATAACCGGCATCCACCAGAGAACCACGCGCCCCACAGTGGCAATAACCAGCATCCACCAGAGAACCACACACCCCACAGCGGCAATAACCGGCATCCACCAGAGAACCACGCGCCCCACAGCGGCAATAACCAGCATCCACCAGAGAACCACACACCCCACAGTGGCAATAACCGGCATCCACCAGAGAACCACGTGCCCCACAGCGGCAATAACCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7956:HG2_PB_HySA_19702:HG2_PB_pbsv_10894:HG2_PB_SVrefine2Falcon2Bionano_5212:HG4_PB_pbsv_10913:HG4_PB_SVrefine2Falcon1Dovetail_6683:HG2_PB_SVrefine2PBcRplusDovetail_996:HG4_PB_SVrefine2PBcRDovetail_5475:HG3_PB_SVrefine2PBcRDovetail_5085;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7956:HG4_PB_SVrefine2PBcRDovetail_5475:HG3_PB_SVrefine2PBcRDovetail_5085;NumExactMatchSVs=3;ClusterMaxShiftDist=0.161172;ClusterMaxSizeDiff=0.161172;ClusterMaxEditDist=0.288288;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=252;DistBack=-1822;DistForward=189;DistMin=-1822;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=786;REFWIDENED=10:1382261-1383046;PctSeqSimilarity=0.8715;PctSizeSimilarity=0.6667;PctRecOverlap=0.3325;SizeDiff=-126;StartDistance=-190;EndDistance=-190;GTMatch=1;TruScore=62;MatchId=473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:73:./.:1:0:1:0:./.:0:1:0:0:./.:0:1:./.:.:.:.:.:.
chr10	1516136	HG2_Ill_svaba_13580	A	AGGGGGCCGGGTAGTTTCTAGTGCAGGAGACACGCCTTTCCTTGCTGAGCCCCCGGATCATGGGGGAGGCCTCGACG	20	PASS	ClusterIDs=HG2_PB_HySA_19718:HG2_PB_pbsv_10900:HG2_PB_PB10Xdip_3327:HG3_PB_pbsv_10630:HG2_PB_PB10Xdip_3326:HG2_Ill_breakscan11_4128:HG4_PB_SVrefine2PBcRDovetail_5480:HG4_Ill_svaba_13666:HG4_Ill_scalpel_10028:HG4_Ill_manta_2615:HG4_Ill_SVrefine2DISCOVARDovetail_7809:HG4_Ill_Krunchall_15148:HG4_Ill_GATKHC_17507:HG4_Ill_GATKHCSBGrefine_7517:HG4_Ill_250bpfermikitraw_14451:HG4_Ill_150bpfermikitraw_13839:HG3_Ill_svaba_13721:HG3_Ill_scalpel_10440:HG3_Ill_SVrefine2DISCOVARDovetail_8009:HG3_Ill_Krunchall_14584:HG3_Ill_GATKHC_17408:HG3_Ill_GATKHCSBGrefine_7251:HG2_PB_SVrefine2PBcRplusDovetail_1000:HG2_PB_SVrefine2Falcon2Bionano_5216:HG2_PB_SVrefine2Falcon1plusDovetail_1039:HG2_Ill_svaba_13580:HG2_Ill_scalpel_10297:HG2_Ill_manta_3071:HG2_Ill_SVrefine2DISCOVARplusDovetail_1143:HG2_Ill_Krunchall_14877:HG2_Ill_GATKHC_17467:HG2_Ill_GATKHCSBGrefine_7336:HG2_10X_SVrefine210Xhap12_7686:HG3_PB_assemblyticsfalcon_2230:HG3_PB_HySA_16426;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7686:HG2_Ill_GATKHCSBGrefine_7336:HG2_Ill_GATKHC_17467:HG2_Ill_Krunchall_14877:HG2_Ill_SVrefine2DISCOVARplusDovetail_1143:HG2_Ill_manta_3071:HG2_Ill_scalpel_10297:HG2_Ill_svaba_13580:HG2_PB_SVrefine2Falcon1plusDovetail_1039:HG2_PB_SVrefine2Falcon2Bionano_5216:HG2_PB_SVrefine2PBcRplusDovetail_1000:HG3_Ill_GATKHCSBGrefine_7251:HG3_Ill_GATKHC_17408:HG3_Ill_Krunchall_14584:HG3_Ill_SVrefine2DISCOVARDovetail_8009:HG3_Ill_scalpel_10440:HG3_Ill_svaba_13721:HG4_Ill_150bpfermikitraw_13839:HG4_Ill_250bpfermikitraw_14451:HG4_Ill_GATKHCSBGrefine_7517:HG4_Ill_GATKHC_17507:HG4_Ill_Krunchall_15148:HG4_Ill_SVrefine2DISCOVARDovetail_7809:HG4_Ill_manta_2615:HG4_Ill_scalpel_10028:HG4_Ill_svaba_13666:HG4_PB_SVrefine2PBcRDovetail_5480;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0519481;ClusterMaxSizeDiff=0.0387097;ClusterMaxEditDist=0.216561;PBcalls=11;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=76;DistBack=4;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=129;REFWIDENED=10:1516137-1516265;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=474.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:1/1:0:18:2:23:1/1:0:31:1:23:1/1:0:36:./.:.:.:.:.:.
chr10	1525905	HG2_Ill_svaba_13581	T	TGAAAACAAACAAACATACAAAAATAGCCACAAAAGCCCCCCCAACCCCGGAACTGATGAAGTCTAGCTGTGTTATTTTTCATTTTTTGGTGACGCTTGATTCCCCTCTTATCACTGATGTTCCAGGGCCAGGGCCACCCTCGAATGACTCTCCCGAGA	20	PASS	ClusterIDs=HG2_PB_pbsv_10901:HG4_PB_HySA_15905:HG4_Ill_svaba_13667:HG4_PB_pbsv_10923:HG4_Ill_manta_2616:HG4_Ill_MetaSV_453:HG4_Ill_GATKHCSBGrefine_7518:HG4_Ill_Cortex_310:HG2_PB_SVrefine2Falcon2Bionano_5217:HG2_Ill_svaba_13581:HG2_Ill_manta_3072:HG2_Ill_SpiralSDKrefine_1419:HG2_Ill_MetaSV_434:HG2_Ill_GATKHCSBGrefine_7337:HG2_Ill_Cortex_674:HG2_10X_SVrefine210Xhap12_7687:HG2_PB_SVrefine2Falcon1plusDovetail_1040:HG2_PB_SVrefine2PB10Xhap12_7961:HG2_PB_SVrefine2PBcRplusDovetail_1001:HG2_Ill_breakscan11_4129;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7687:HG2_Ill_Cortex_674:HG2_Ill_GATKHCSBGrefine_7337:HG2_Ill_MetaSV_434:HG2_Ill_SpiralSDKrefine_1419:HG2_Ill_manta_3072:HG2_Ill_svaba_13581:HG2_PB_SVrefine2Falcon2Bionano_5217:HG4_Ill_Cortex_310:HG4_Ill_GATKHCSBGrefine_7518:HG4_Ill_MetaSV_453:HG4_Ill_manta_2616:HG4_Ill_svaba_13667;NumExactMatchSVs=13;ClusterMaxShiftDist=0.336634;ClusterMaxSizeDiff=0.336634;ClusterMaxEditDist=0.39604;PBcalls=7;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=158;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:1525906-1525907;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:35:0|1:24:2:1:31:1|0:0:23:17:0:0/1:33:13:./.:.:.:.:.:.
chr10	1717191	HG3_Ill_150bpfermikitraw_13721	A	ATTCTGGAGGTTTGGGTTTGGGGGTACATGGATGTTCTGGAGGTTTGGGTTCGGGGATGCATGGATG	20	PASS	ClusterIDs=HG3_PB_HySA_16440:HG4_PB_pbsv_10939:HG3_PB_pbsv_10643:HG3_PB_HySA_16441:HG2_PB_HySA_19745:HG2_PB_PB10Xdip_3373:HG2_PB_PB10Xdip_3372:HG4_PB_HySA_15927:HG2_PB_pbsv_10913:HG4_Ill_GATKHC_17528:HG4_Ill_GATKHCSBGrefine_7524:HG4_Ill_150bpfermikitraw_13853:HG3_PB_assemblyticsfalcon_2248:HG3_Ill_GATKHC_17422:HG3_Ill_GATKHCSBGrefine_7257:HG3_Ill_150bpfermikitraw_13721:HG2_Ill_GATKHC_17479:HG2_Ill_GATKHCSBGrefine_7346;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7346:HG2_Ill_GATKHC_17479:HG3_Ill_150bpfermikitraw_13721:HG3_Ill_GATKHCSBGrefine_7257:HG3_Ill_GATKHC_17422:HG3_PB_assemblyticsfalcon_2248:HG4_Ill_150bpfermikitraw_13853:HG4_Ill_GATKHCSBGrefine_7524:HG4_Ill_GATKHC_17528;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0882353;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.330827;PBcalls=10;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=866;REFWIDENED=10:1717057-1717922;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:34:./.:0:0:0:0:./.:0:0:0:0:./.:0:6:./.:.:.:.:.:.
chr10	1910092	HG4_Ill_manta_2620	A	AAATACTACATAAATACTGCAATGTACATAAATAGTACAGTGTACATAAATACTAAATAAATACTGCAATGTACATG	20	PASS	ClusterIDs=HG4_PB_HySA_15938:HG2_PB_HySA_19747:HG2_PB_pbsv_10918:HG4_PB_pbsv_10943:HG2_PB_PB10Xdip_3381:HG3_PB_HySA_16449:HG2_PB_PB10Xdip_3380:HG3_PB_assemblyticsfalcon_2253:HG3_Ill_Krunchall_14594:HG3_Ill_GATKHC_17424:HG3_Ill_GATKHCSBGrefine_7259:HG3_Ill_250bpfermikitraw_14179:HG3_Ill_150bpfermikitraw_13723:HG2_Ill_250bpfermikitraw_14573:HG4_Ill_scalpel_10039:HG4_Ill_manta_2620:HG4_Ill_Krunchall_15163:HG4_Ill_GATKHC_17532:HG4_Ill_GATKHCSBGrefine_7530:HG4_Ill_250bpfermikitraw_14466:HG4_Ill_150bpfermikitraw_13856:HG2_Ill_manta_3076:HG2_Ill_Krunchall_14888:HG2_Ill_GATKHC_17481:HG2_Ill_GATKHCSBGrefine_7352:HG2_Ill_breakscan11_4134;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7352:HG2_Ill_GATKHC_17481:HG2_Ill_Krunchall_14888:HG2_Ill_manta_3076:HG4_Ill_150bpfermikitraw_13856:HG4_Ill_250bpfermikitraw_14466:HG4_Ill_GATKHCSBGrefine_7530:HG4_Ill_GATKHC_17532:HG4_Ill_Krunchall_15163:HG4_Ill_manta_2620:HG4_Ill_scalpel_10039;NumExactMatchSVs=11;ClusterMaxShiftDist=0.1125;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.21118;PBcalls=8;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=46;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=33;REFWIDENED=10:1910091-1910126;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:62:1/1:4:30:1:23:1/1:1:33:1:35:1/1:0:52:./.:.:.:.:.:.
chr10	2077542	HG2_Ill_SVrefine2DISCOVARplusDovetail_1155	T	TATAAATTTCAGCATTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTCCTTGGTAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_GATKHCSBGrefine_7260:HG2_PB_pbsv_10921:HG3_PB_pbsv_10652:HG4_PB_pbsv_10946:HG4_Ill_SVrefine2DISCOVARDovetail_7816:HG4_Ill_MetaSV_455:HG4_Ill_GATKHCSBGrefine_7531:HG2_Ill_SVrefine2DISCOVARplusDovetail_1155:HG2_Ill_GATKHCSBGrefine_7353:HG2_Ill_MetaSV_438:HG2_10X_SVrefine210Xhap12_7700:HG2_PB_SVrefine2Falcon1plusDovetail_1050:HG3_Ill_MetaSV_420;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1155:HG4_Ill_GATKHCSBGrefine_7531:HG4_Ill_MetaSV_455:HG4_Ill_SVrefine2DISCOVARDovetail_7816;NumExactMatchSVs=4;ClusterMaxShiftDist=0.05919;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.249619;PBcalls=4;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=314;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=10:2077543-2077543;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:23:0|1:35:2:0:26:1|0:0:6:51:0:0/1:28:11:0/1:6:36:.:.:.
chr10	2604819	HG2_10X_SVrefine210Xhap12_7708	T	TAGAAAAATCGACTATGATACATATATATACATATATACATACATATATACATATATATACATATATATACATATATGATACATATATATGTATGTATACTATGATACATATATATATACATGTATATATATATACATGTATATATTCATGTATATATATATACATGCATATATACATGTATATATACATCTTATATATACATGTATATATATATATA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4137:HG2_PB_pbsv_10935:HG3_PB_pbsv_10669:HG2_PB_SVrefine2Falcon2Bionano_5236:HG4_PB_pbsv_10961:HG2_Ill_MetaSV_442:HG3_PB_assemblyticsfalcon_2278:HG3_PB_SVrefine2Falcon1Dovetail_6629:HG4_Ill_MetaSV_457:HG3_Ill_manta_2519:HG3_Ill_SVrefine2DISCOVARDovetail_8030:HG3_Ill_MetaSV_425:HG2_Ill_manta_3083:HG4_Ill_manta_2625:HG2_PB_SVrefine2PBcRplusDovetail_1019:HG2_PB_SVrefine2PB10Xhap12_7985:HG4_PB_SVrefine2PBcRDovetail_5494:HG4_PB_SVrefine2Falcon1Dovetail_6711:HG4_Ill_SVrefine2DISCOVARDovetail_7823:HG4_Ill_GATKHCSBGrefine_7541:HG3_PB_SVrefine2PBcRDovetail_5105:HG3_Ill_GATKHCSBGrefine_7272:HG2_PB_SVrefine2Falcon1plusDovetail_1058:HG2_Ill_SVrefine2DISCOVARplusDovetail_1167:HG2_Ill_GATKHCSBGrefine_7364:HG2_10X_SVrefine210Xhap12_7708:HG2_PB_HySA_19775:HG2_PB_PB10Xdip_3409:HG2_PB_PB10Xdip_3408;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7708:HG2_Ill_GATKHCSBGrefine_7364:HG2_Ill_SVrefine2DISCOVARplusDovetail_1167:HG2_PB_SVrefine2Falcon1plusDovetail_1058:HG3_Ill_GATKHCSBGrefine_7272:HG3_PB_SVrefine2PBcRDovetail_5105:HG4_Ill_GATKHCSBGrefine_7541:HG4_Ill_SVrefine2DISCOVARDovetail_7823:HG4_PB_SVrefine2Falcon1Dovetail_6711:HG4_PB_SVrefine2PBcRDovetail_5494;NumExactMatchSVs=10;ClusterMaxShiftDist=0.224299;ClusterMaxSizeDiff=0.224299;ClusterMaxEditDist=0.261682;PBcalls=15;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=217;DistBack=4142;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=10:2604820-2604839;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.9909;PctRecOverlap=0.9909;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:80:1/1:2:30:0:37:1/1:0:17:0:12:1/1:0:33:./.:.:.:.:.:.
chr10	2709206	HG2_PB_SVrefine2Falcon1plusDovetail_1060	A	ATGTGTGTGTGTGTGTATATATATACACACACACATTATATATACACATTTATGATATATTTATACATATATACACGTGTGTATGTGTGTGTATGTGTATATATGTATATATACATATATGCTTGTTTTGTATATGTGTATATTACATATGTATATATACATGGATATACATATGTATATACATATGTACATGTATGTATACATATAAATGTCTGTATGTATATACATATACATACATCTGTATGTATATATGTGTGTGTGTATACATATGCCTTTACATATCACTCACTTCATCAGGGTGTACTCTATATATATAGTGTATATATGTGTGTGCATATATATATGTATATACATATCACTCACTTGGCCAGGGTGTACTCTCTATATATAGTATACATATATGTGTGTGTGTGTGTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7711:HG3_PB_pbsv_10671:HG2_PB_pbsv_10937:HG4_PB_pbsv_10963:HG3_PB_HySA_16474:HG3_PB_assemblyticsfalcon_2282:HG2_PB_PB10Xdip_3610:HG2_PB_PB10Xdip_3609:HG4_PB_HySA_15974:HG3_Ill_MetaSV_426:HG4_PB_SVrefine2Falcon1Dovetail_6712:HG3_PB_SVrefine2PBcRDovetail_5107:HG3_PB_SVrefine2Falcon1Dovetail_6631:HG3_Ill_manta_2520:HG3_Ill_SVrefine2DISCOVARDovetail_8032:HG3_Ill_GATKHCSBGrefine_7274:HG2_PB_SVrefine2PBcRplusDovetail_1021:HG2_Ill_SVrefine2DISCOVARplusDovetail_1170:HG2_PB_SVrefine2PB10Xhap12_7987:HG4_PB_SVrefine2PBcRDovetail_5495:HG4_Ill_manta_2626:HG2_Ill_MetaSV_443:HG4_Ill_SVrefine2DISCOVARDovetail_7824:HG4_Ill_MetaSV_458:HG4_Ill_GATKHCSBGrefine_7543:HG2_PB_SVrefine2Falcon2Bionano_5237:HG2_PB_SVrefine2Falcon1plusDovetail_1060:HG2_Ill_manta_3084:HG2_Ill_GATKHCSBGrefine_7366;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7711:HG4_Ill_SVrefine2DISCOVARDovetail_7824:HG4_Ill_MetaSV_458:HG4_Ill_GATKHCSBGrefine_7543:HG2_PB_SVrefine2Falcon2Bionano_5237:HG2_PB_SVrefine2Falcon1plusDovetail_1060:HG2_Ill_manta_3084:HG2_Ill_GATKHCSBGrefine_7366;NumExactMatchSVs=8;ClusterMaxShiftDist=0.156028;ClusterMaxSizeDiff=0.156028;ClusterMaxEditDist=0.210402;PBcalls=16;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=416;DistBack=9110;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=10:2709207-2709227;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9905;PctRecOverlap=0.9905;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=482.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:1:19:0:27:1/1:1:38:0:54:1/1:0:36:1/1:1:176:.:.:.
chr10	3083754	HG2_PB_HySA_19786	G	GAAAAAATGGTGAGTGCTCAATGGTGCCCAGGCTGGAGTGCAAGTGGCGTGATCTCGGCTCACTACAACCTACACCTCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAAGTGAGGAGCGTCTCTCTGCCCCGCCGCCCATTGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCTCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCTGAGACCCCGTCTGGGAGGTGACGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCGGCAGCTGCCCCGTTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCCGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGTCAGCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGGGGGGCGGTCAGCCCCCCGCCTGGCCAGCCGTGCCGTCTGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGATGTGGGGGGTCAGCCTCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCTCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGAGGTGGGGGGTCAGCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCTCCGCCCGGCCAACCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGCGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTAAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCTCTGGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTTGTGACCTTACCCCCAACCCTGTGCTCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAAAGGATTAAGGGTGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCACAGGGTCCTCTGCCTAGGAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAAAAAAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7989:HG4_PB_pbsv_10965:HG2_PB_pbsv_10940:HG2_PB_HySA_19786:HG2_PB_HySA_19785:HG2_PB_SVrefine2Falcon1plusDovetail_1062:HG2_PB_SVrefine2PBcRplusDovetail_1023:HG4_PB_HySA_15979:HG2_PB_PB10Xdip_3614:HG2_PB_PB10Xdip_3613:HG3_PB_assemblyticsfalcon_2288:HG3_PB_SVrefine2Falcon1Dovetail_6633:HG4_PB_SVrefine2Falcon1Dovetail_6714:HG4_PB_SVrefine2PBcRDovetail_5497;NumClusterSVs=14;ExactMatchIDs=HG2_PB_HySA_19786;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0435137;ClusterMaxSizeDiff=0.0433839;ClusterMaxEditDist=0.183324;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1844;DistBack=-9;DistForward=13;DistMin=-9;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=10:3083755-3083763;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9989;PctRecOverlap=0.9989;SizeDiff=-2;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:40:0|1:21:3:0:28:0|1:17:0:0:7:0/1:21:12:0/1:54:105:.:1968:.
chr10	3248587	HG3_PB_HySA_16505	A	AGCTATGCTCTCCAGGTCACAGGGCACTGCACTGCCACCGACCAAAGGCACGGGAGGAGAGGTTGG	20	PASS	ClusterIDs=HG3_PB_pbsv_10683:HG2_PB_PB10Xdip_3626:HG3_PB_HySA_16505:HG2_Ill_GATKHC_17516;NumClusterSVs=4;ExactMatchIDs=HG3_PB_HySA_16505;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0625;ClusterMaxSizeDiff=0.0625;ClusterMaxEditDist=0.109375;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=59;DistForward=3253;DistMin=59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=489;REFWIDENED=10:3248102-3248590;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9846;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:./.:26:16:3:12:./.:2:1:6:0:0/0:27:1:./.:.:.:.:.:.
chr10	3284829	HG4_PB_SVrefine2PBcRDovetail_5503	A	ATGTGTGTGTCTGTGTGGTGTGTGATTGTGTGTGTCTGTGTGAATGTGTGTGTGCATATGTGGTGTGTGTGGTGTGTGAGTGCGTGTGTCTATGTATGTGTTGGGGTGTGTGTGGTATGTGTATGTATGTGTGAGGGGGTGTGTATGTGTGAGGGTGTGTGTGGGGGTGTGTATGTATAAATGTGTGCATCTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1178:HG2_PB_SVrefine2Falcon1plusDovetail_1068:HG4_PB_pbsv_10976:HG2_PB_SVrefine2PBcRplusDovetail_1028:HG2_PB_PB10Xdip_3630:HG2_PB_PB10Xdip_3629:HG2_10X_SVrefine210Xhap12_7718:HG4_Ill_manta_2628:HG4_Ill_GATKHCSBGrefine_7554:HG2_Ill_GATKHCSBGrefine_7374:HG3_PB_pbsv_10686:HG4_Ill_MetaSV_461:HG2_PB_HySA_19808:HG4_PB_SVrefine2Falcon1Dovetail_6721:HG3_PB_SVrefine2PBcRDovetail_5115:HG4_PB_HySA_15995:HG2_PB_HySA_19807:HG4_PB_HySA_15994:HG2_PB_pbsv_10950:HG2_PB_SVrefine2Falcon2Bionano_5244:HG3_PB_SVrefine2Falcon1Dovetail_6639:HG4_PB_SVrefine2PBcRDovetail_5503:HG4_Ill_SVrefine2DISCOVARDovetail_7830:HG2_PB_SVrefine2PB10Xhap12_7998;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1178:HG4_PB_SVrefine2PBcRDovetail_5503:HG4_Ill_SVrefine2DISCOVARDovetail_7830:HG2_PB_SVrefine2PB10Xhap12_7998;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0911392;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.300493;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=192;DistBack=13;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=88;REFWIDENED=10:3284830-3284917;PctSeqSimilarity=0.9617;PctSizeSimilarity=0.9697;PctRecOverlap=0.593;SizeDiff=-6;StartDistance=-78;EndDistance=-78;GTMatch=0;TruScore=84;MatchId=485.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:36:1/1:2:16:0:19:./.:6:87:3:78:./.:0:4:./.:.:.:.:.:.
chr10	3357362	HG2_PB_PB10Xdip_3635	A	GAGGAGGGTGACTTCACAGAGTGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCACAGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCAAAGAGTGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCACAGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGAGGAGGGTGACTTCAAAGAGTGAGGGAAGGGGAGGGTGACTTCACAGAGTGAGGGAAGGGACAGTGACTTCAGAGTGAGGGAAGGGGAGGGTGACTCACAGAGAGAGGGAAGGGACAGTGACTTCACAGAGTGAGGGAAGGGACAGTGACTTCACAGAGTGAGGGAAGAGGACGGTGACTTCACAGAGTGAGGGAAGGGGAGGGTGACTTCACAGAGTGAGGGAAGGGGAGGGTGACTTCACAGAGTGAGGGAAGGGGAGGGTGACTTCACAGAGTGAGGGAAGGGGACGGTGACTTCACAGAGTGAGGGAAGGGACGGTGACTTCACAGAGTGAGGGAAGAGGACGGTGACTTCACAGAGTGAGGGAAGGGGACGGTGACTTCACAGAGTGAGGGAAG	10	PASS	ClusterIDs=HG2_PB_HySA_19815:HG2_PB_PB10Xdip_3636:HG2_PB_PB10Xdip_3635:HG3_PB_HySA_16511;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_3635:HG2_PB_PB10Xdip_3636;NumExactMatchSVs=2;ClusterMaxShiftDist=0.176829;ClusterMaxSizeDiff=0.176829;ClusterMaxEditDist=0.182927;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=681;DistBack=-35;DistForward=35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1306;REFWIDENED=10:3356172-3357477;PctSeqSimilarity=0.9062;PctSizeSimilarity=0.7517;PctRecOverlap=0.3649;SizeDiff=-225;StartDistance=463;EndDistance=463;GTMatch=0;TruScore=67;MatchId=486.1.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:72:1/1:1:13:2:25:./.:3:11:2:4:./.:2:3:1/1:2:50:.:.:.
chr10	3473274	HG2_PB_SVrefine2PB10Xhap12_8003	A	AGATCTGGTGGAGATAGGACTAGTAGAGGTGGATCAAGTAGATGTGGATCTAGTAGAGGTGGATATAGTGGAGGTGGATCTAGTGGAGGTGGATCTAGTGGAGATGGATCTTGGGGTGGATCTCATGGGGATGGATCTAGTGGAGGTGGATCTAGTGGGGATGGGTCTCATGCAGGTGGATCTAGTGGAGGTGGATCTAGTGGAGGTGGATCTAGTGGAGGGGTATCTCGTGGAGGTGGATCTCGTGCAGGTGGATCTAGTGGAGGTGGATCTAGTGGAGGTGGATCTAGTGGAGGTGGGTCTCATGCGGGTGGATCTAGTGGGGGTGGATCTAGTGGAGGTGGATGTAGTGGAGGGGTATCTCGTGGAGGTGGATCTTGTGCAGGTGGGTCTCATGCGGGTGGATCTAGTGGGGGTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7722:HG2_PB_pbsv_10956:HG3_PB_pbsv_10695:HG3_PB_HySA_16520:HG2_PB_PB10Xdip_3648:HG2_PB_PB10Xdip_3647:HG4_PB_HySA_16010:HG2_PB_HySA_19825:HG4_PB_SVrefine2Falcon1Dovetail_6728:HG3_PB_SVrefine2Falcon1Dovetail_6646:HG2_PB_SVrefine2Falcon2Bionano_5250:HG4_PB_SVrefine2PBcRDovetail_5509:HG4_Ill_SVrefine2DISCOVARDovetail_7834:HG2_PB_SVrefine2PBcRplusDovetail_1033:HG2_PB_SVrefine2PB10Xhap12_8003:HG2_PB_SVrefine2Falcon1plusDovetail_1072:HG3_PB_SVrefine2PBcRDovetail_5120:HG3_Ill_SVrefine2DISCOVARDovetail_8042;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1072:HG2_PB_SVrefine2PB10Xhap12_8003:HG2_PB_SVrefine2PBcRplusDovetail_1033:HG4_Ill_SVrefine2DISCOVARDovetail_7834:HG4_PB_SVrefine2PBcRDovetail_5509;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0698487;ClusterMaxSizeDiff=0.0582072;ClusterMaxEditDist=0.237485;PBcalls=15;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=417;DistBack=10123;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=268;REFWIDENED=10:3473275-3473542;PctSeqSimilarity=0.9718;PctSizeSimilarity=0.9653;PctRecOverlap=0.8568;SizeDiff=-15;StartDistance=-54;EndDistance=-54;GTMatch=0;TruScore=93;MatchId=487.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:1/1:1:29:1:13:1/1:0:57:2:53:1/1:0:16:1/1:2:67:.:.:.
chr10	3569008	HG4_Ill_MetaSV_466	T	TAAAAATTCTGTGAACTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCATGGTGGCGCACGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_19826:HG2_PB_pbsv_10959:HG4_PB_pbsv_10986:HG4_PB_HySA_16014:HG3_PB_assemblyticsfalcon_2319:HG2_PB_SVrefine2Falcon1plusDovetail_1075:HG2_Ill_breakscan11_4138:HG2_PB_SVrefine2PBcRplusDovetail_1035:HG4_PB_SVrefine2PBcRDovetail_5510:HG4_PB_SVrefine2Falcon1Dovetail_6730:HG4_Ill_SVrefine2DISCOVARDovetail_7836:HG4_Ill_MetaSV_466:HG4_Ill_GATKHCSBGrefine_7557:HG2_Ill_MetaSV_448:HG2_Ill_GATKHCSBGrefine_7376:HG3_Ill_MetaSV_427:HG3_Ill_GATKHCSBGrefine_7288:HG3_PB_SVrefine2PBcRDovetail_5121:HG3_PB_pbsv_10697:HG3_PB_HySA_16523;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7376:HG2_Ill_MetaSV_448:HG4_Ill_GATKHCSBGrefine_7557:HG4_Ill_MetaSV_466:HG4_Ill_SVrefine2DISCOVARDovetail_7836:HG4_PB_SVrefine2Falcon1Dovetail_6730;NumExactMatchSVs=6;ClusterMaxShiftDist=0.150641;ClusterMaxSizeDiff=0.150641;ClusterMaxEditDist=0.251149;PBcalls=12;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=316;DistBack=-4;DistForward=0;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=10:3569009-3569025;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=488.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:31:./.:8:14:15:14:0|1:20:0:0:5:0/1:21:18:0/1:7:34:.:.:.
chr10	4905843	HG3_PB_SVrefine2PBcRDovetail_5132	A	AAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACAAAATTGATAGACCACTAGCAAGACTAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8020:HG3_PB_pbsv_10712:HG2_PB_pbsv_10977:HG4_Ill_svaba_13745:HG4_PB_pbsv_11003:HG4_Ill_SVrefine2DISCOVARDovetail_7851:HG4_Ill_Krunchall_15229:HG4_Ill_GATKHC_17609:HG4_Ill_GATKHCSBGrefine_7570:HG4_Ill_250bpfermikitraw_14537:HG3_PB_SVrefine2PBcRDovetail_5132:HG3_Ill_svaba_13802:HG3_Ill_Krunchall_14650:HG3_Ill_GATKHC_17488:HG3_Ill_GATKHCSBGrefine_7299:HG3_Ill_250bpfermikitraw_14248:HG2_Ill_svaba_13651:HG2_Ill_SVrefine2DISCOVARplusDovetail_1193:HG2_Ill_Krunchall_14949:HG2_Ill_GATKHC_17557:HG2_Ill_GATKHCSBGrefine_7389:HG2_Ill_250bpfermikitraw_14640;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14640:HG2_Ill_GATKHCSBGrefine_7389:HG2_Ill_GATKHC_17557:HG2_Ill_Krunchall_14949:HG2_Ill_SVrefine2DISCOVARplusDovetail_1193:HG2_Ill_svaba_13651:HG3_Ill_250bpfermikitraw_14248:HG3_Ill_GATKHCSBGrefine_7299:HG3_Ill_GATKHC_17488:HG3_Ill_Krunchall_14650:HG3_Ill_svaba_13802:HG3_PB_SVrefine2PBcRDovetail_5132:HG4_Ill_250bpfermikitraw_14537:HG4_Ill_GATKHCSBGrefine_7570:HG4_Ill_GATKHC_17609:HG4_Ill_Krunchall_15229:HG4_Ill_SVrefine2DISCOVARDovetail_7851:HG4_Ill_svaba_13745;NumExactMatchSVs=18;ClusterMaxShiftDist=0.136986;ClusterMaxSizeDiff=0.109589;ClusterMaxEditDist=0.261438;PBcalls=5;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=72;DistBack=8196;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=75;REFWIDENED=10:4905844-4905918;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:0|1:23:1:3:34:./.:1:14:18:0:0/1:21:30:./.:.:.:.:.:.
chr10	5074413	HG4_Ill_GATKHCSBGrefine_7571	T	TTCTCCAAGGCCCCACCAGAGTACCTAGATAAAGAGTGTCCATTGGTGCATTTACAAACCCTGAGCTAGACACAGGGTGCTGATTG	20	PASS	ClusterIDs=HG2_PB_pbsv_10978:HG4_Ill_Krunchall_15231:HG4_Ill_GATKHCSBGrefine_7571:HG4_Ill_250bpfermikitraw_14540:HG4_Ill_150bpfermikitraw_13913:HG2_Ill_manta_3094:HG2_Ill_Krunchall_14951:HG2_Ill_GATKHCSBGrefine_7390:HG2_Ill_250bpfermikitraw_14643:HG2_PB_PB10Xdip_4382:HG2_PB_PB10Xdip_4381:HG4_PB_pbsv_11004:HG2_PB_HySA_19859;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14643:HG2_Ill_GATKHCSBGrefine_7390:HG2_Ill_Krunchall_14951:HG2_Ill_manta_3094:HG4_Ill_150bpfermikitraw_13913:HG4_Ill_250bpfermikitraw_14540:HG4_Ill_GATKHCSBGrefine_7571:HG4_Ill_Krunchall_15231;NumExactMatchSVs=8;ClusterMaxShiftDist=0.193939;ClusterMaxSizeDiff=0.193939;ClusterMaxEditDist=0.230303;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=85;DistBack=-1;DistForward=23;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=10:5074412-5074414;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=490.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:49:0|1:31:1:2:43:./.:26:0:1:3:0/1:25:20:./.:.:.:.:.:.
chr10	5202142	HG2_PB_SVrefine2Falcon1plusDovetail_1087	G	GTGATTGAAATTGGACACCCCAATGGACCTGGTTAAACCTGCTTCTTTGCACTTCTCCAGGGCCTGGGGAGGAAGGATATGGGTGATAGACCTTTAGTGTAAATTTTTCTTTTCAATTGGCGTTTGACTTTGTAAATGCTGGAAATCTGTTTTAACATATATAAATATTAGACTGAATTAAACAGTTTTATCACTTGAATATACAATTTCCTAATGCATTACCTTGCTATGCATATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6742:HG3_PB_pbsv_10713:HG2_PB_pbsv_10979:HG4_PB_pbsv_11006:HG3_PB_assemblyticsfalcon_2346:HG2_PB_PB10Xdip_4384:HG2_PB_PB10Xdip_4383:HG3_Ill_GATKHCSBGrefine_7300:HG4_Ill_SVrefine2DISCOVARDovetail_7852:HG4_Ill_GATKHCSBGrefine_7572:HG3_Ill_SVrefine2DISCOVARDovetail_8059:HG2_PB_SVrefine2PBcRplusDovetail_1049:HG2_PB_SVrefine2PB10Xhap12_8022:HG2_PB_SVrefine2Falcon2Bionano_5260:HG2_PB_SVrefine2Falcon1plusDovetail_1087:HG2_Ill_SVrefine2DISCOVARplusDovetail_1195:HG2_Ill_MetaSV_453:HG2_Ill_GATKHCSBGrefine_7391:HG2_10X_SVrefine210Xhap12_7738:HG3_PB_SVrefine2PBcRDovetail_5133:HG4_PB_SVrefine2PBcRDovetail_5523;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7738:HG2_Ill_GATKHCSBGrefine_7391:HG2_Ill_MetaSV_453:HG2_Ill_SVrefine2DISCOVARplusDovetail_1195:HG2_PB_SVrefine2Falcon1plusDovetail_1087:HG2_PB_SVrefine2Falcon2Bionano_5260:HG2_PB_SVrefine2PB10Xhap12_8022:HG2_PB_SVrefine2PBcRplusDovetail_1049:HG3_Ill_SVrefine2DISCOVARDovetail_8059:HG4_Ill_GATKHCSBGrefine_7572:HG4_Ill_SVrefine2DISCOVARDovetail_7852;NumExactMatchSVs=11;ClusterMaxShiftDist=0.115464;ClusterMaxSizeDiff=0.115464;ClusterMaxEditDist=0.181087;PBcalls=13;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=236;DistBack=-122620;DistForward=-1;DistMin=-122620;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=10:5202143-5202148;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=491.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:./.:0:2:1:32:./.:0:8:0:0:1/1:0:33:./.:.:.:.:.:.
chr10	5681687	HG3_Ill_svaba_13819	G	GTCCATGAGTATCCGCAAAACTAAATAATAAGTGGGCGATGGTGCCCCCTGGGTGCGGGCAGCCTC	20	PASS	ClusterIDs=HG3_PB_pbsv_10718:HG4_PB_HySA_16051:HG4_PB_assemblyticsfalcon_2303:HG2_Ill_breakscan11_4139:HG3_PB_HySA_16563:HG2_PB_HySA_19872:HG4_PB_SVrefine2Falcon1Dovetail_6744:HG4_PB_SVrefine2PBcRDovetail_5527:HG4_Ill_svaba_13769:HG4_Ill_manta_2638:HG4_Ill_SVrefine2DISCOVARDovetail_7858:HG4_Ill_Krunchall_15243:HG4_Ill_GATKHC_17629:HG4_Ill_GATKHCSBGrefine_7577:HG4_Ill_Cortex_336:HG4_Ill_250bpfermikitraw_14557:HG4_Ill_150bpfermikitraw_13928:HG3_Ill_svaba_13819:HG3_Ill_manta_2527:HG3_Ill_Spiral_11447:HG3_Ill_Krunchall_14666:HG3_Ill_GATKHC_17507:HG3_Ill_GATKHCSBGrefine_7304:HG3_Ill_Cortex_347:HG3_Ill_250bpfermikitraw_14263:HG3_Ill_150bpfermikitraw_13795:HG2_PB_SVrefine2PBcRplusDovetail_1052:HG2_PB_SVrefine2PB10Xhap12_8026:HG2_PB_SVrefine2Falcon2Bionano_5264:HG2_PB_SVrefine2Falcon1plusDovetail_1088:HG2_Ill_svaba_13672:HG2_Ill_manta_3097:HG2_Ill_SpiralSDKrefine_1483:HG2_Ill_SVrefine2DISCOVARplusDovetail_1199:HG2_Ill_Krunchall_14965:HG2_Ill_GATKHC_17574:HG2_Ill_GATKHCSBGrefine_7395:HG2_Ill_Cortex_714:HG2_Ill_250bpfermikitraw_14658:HG2_Ill_150bpfermikitraw_13761:HG2_10X_SVrefine210Xhap12_7743:HG2_PB_PB10Xdip_4431:HG2_PB_PB10Xdip_4430;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7743:HG2_Ill_150bpfermikitraw_13761:HG2_Ill_250bpfermikitraw_14658:HG2_Ill_Cortex_714:HG2_Ill_GATKHCSBGrefine_7395:HG2_Ill_GATKHC_17574:HG2_Ill_Krunchall_14965:HG2_Ill_SVrefine2DISCOVARplusDovetail_1199:HG2_Ill_SpiralSDKrefine_1483:HG2_Ill_manta_3097:HG2_Ill_svaba_13672:HG2_PB_SVrefine2Falcon1plusDovetail_1088:HG2_PB_SVrefine2Falcon2Bionano_5264:HG2_PB_SVrefine2PB10Xhap12_8026:HG2_PB_SVrefine2PBcRplusDovetail_1052:HG3_Ill_150bpfermikitraw_13795:HG3_Ill_250bpfermikitraw_14263:HG3_Ill_Cortex_347:HG3_Ill_GATKHCSBGrefine_7304:HG3_Ill_GATKHC_17507:HG3_Ill_Krunchall_14666:HG3_Ill_Spiral_11447:HG3_Ill_manta_2527:HG3_Ill_svaba_13819:HG4_Ill_150bpfermikitraw_13928:HG4_Ill_250bpfermikitraw_14557:HG4_Ill_Cortex_336:HG4_Ill_GATKHCSBGrefine_7577:HG4_Ill_GATKHC_17629:HG4_Ill_Krunchall_15243:HG4_Ill_SVrefine2DISCOVARDovetail_7858:HG4_Ill_manta_2638:HG4_Ill_svaba_13769:HG4_PB_SVrefine2PBcRDovetail_5527;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0902256;ClusterMaxSizeDiff=0.0902256;ClusterMaxEditDist=0.150376;PBcalls=13;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=65;DistBack=5;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:5681688-5681689;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=493.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:1:26:2:22:1/1:0:16:0:31:1/1:0:64:./.:.:.:.:.:.
chr10	6502789	HG3_Ill_GATKHC_17519	C	CATCCATCCATCCATCCCATCCATCCATCCAACCATCTGTTCAATTTACCCATCACCA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_14669:HG4_Ill_svaba_13776:HG3_Ill_svaba_13829:HG2_Ill_svaba_13681:HG3_PB_HySA_16578:HG2_PB_pbsv_10996:HG4_Ill_GATKHC_17641:HG3_PB_pbsv_10727:HG4_Ill_GATKHCSBGrefine_7584:HG3_Ill_svaba_13828:HG2_Ill_svaba_13680:HG2_PB_HySA_19889:HG4_Ill_250bpfermikitraw_14568:HG4_Ill_150bpfermikitraw_13941:HG3_Ill_GATKHC_17519:HG3_Ill_GATKHCSBGrefine_7312:HG3_Ill_250bpfermikitraw_14273:HG2_Ill_Krunchall_14978:HG2_Ill_GATKHC_17586:HG2_Ill_GATKHCSBGrefine_7400;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14669:HG4_Ill_GATKHC_17641:HG4_Ill_GATKHCSBGrefine_7584:HG4_Ill_250bpfermikitraw_14568:HG4_Ill_150bpfermikitraw_13941:HG3_Ill_GATKHC_17519:HG3_Ill_GATKHCSBGrefine_7312:HG3_Ill_250bpfermikitraw_14273:HG2_Ill_Krunchall_14978:HG2_Ill_GATKHC_17586:HG2_Ill_GATKHCSBGrefine_7400;NumExactMatchSVs=11;ClusterMaxShiftDist=0.101695;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.305085;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=3;DistForward=66;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=56;REFWIDENED=10:6502788-6502846;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=494.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:1|0:6:24:23:2:./.:3:37:23:3:0/1:10:17:./.:.:.:.:.:.
chr10	6871341	HG4_PB_SVrefine2Falcon1Dovetail_6752	T	AAAAAAAGCAGTCCTGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6752:HG2_PB_pbsv_11000:HG2_PB_SVrefine2Falcon1plusDovetail_1097:HG4_PB_pbsv_11031:HG3_PB_SVrefine2Falcon1Dovetail_6659;NumClusterSVs=5;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_6752;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0424403;ClusterMaxSizeDiff=0.0371353;ClusterMaxEditDist=0.148148;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=184;DistBack=-6305;DistForward=-1;DistMin=-6305;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:6871342-6871340;PctSeqSimilarity=0.9919;PctSizeSimilarity=0.9892;PctRecOverlap=0.9893;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=495.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:17:26:0|1:16:4:2:16:./.:2:15:20:0:./.:35:4:./.:.:.:.:.:.
chr10	7761886	HG2_PB_SVrefine2PB10Xhap12_8044	A	AAAGTGTGGGAGGGTGGGAGTGGGGAGACTTGGGAGAAGTGTGGGAGGGTGGGAGTGGGGAGACTTGGGAG	10	PASS	ClusterIDs=HG2_PB_HySA_19913:HG4_PB_pbsv_11045:HG2_PB_PB10Xdip_4725:HG4_PB_HySA_16085:HG3_PB_HySA_16597:HG2_PB_pbsv_11014:HG2_PB_PB10Xdip_4724:HG3_PB_pbsv_10742:HG3_PB_SVrefine2Falcon1Dovetail_6667:HG2_PB_SVrefine2PB10Xhap12_8044:HG2_PB_SVrefine2Falcon2Bionano_5278;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5278:HG2_PB_SVrefine2PB10Xhap12_8044:HG3_PB_SVrefine2Falcon1Dovetail_6667;NumExactMatchSVs=3;ClusterMaxShiftDist=0.100719;ClusterMaxSizeDiff=0.100719;ClusterMaxEditDist=0.321678;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=70;DistBack=32029;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=234;REFWIDENED=10:7761887-7762120;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=498.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:36:1/1:2:19:3:16:./.:2:0:1:0:./.:1:0:./.:.:.:.:.:.
chr10	8339145	HG4_PB_SVrefine2Falcon1Dovetail_6758	TCC	ATTTTCCCCTCCCTCCCTTCTTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTCCTTCCTCCTCTCTCTCTGTCTCTCTCCCCACCGCTCTTTCTTTCTGGGGTACAGTGGTGTGCCTCTGGAATAAAGGCCTTAGACCTACAATCAGACAAACTATGTCAGAGAATTTCCTTTTATTTTCTTTTCTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1071:HG2_PB_SVrefine2Falcon2Bionano_5283:HG3_PB_assemblyticsfalcon_2401:HG3_PB_SVrefine2Falcon1Dovetail_6673:HG4_PB_assemblyticsfalcon_2351:HG4_PB_SVrefine2Falcon1Dovetail_6758:HG3_PB_pbsv_10747:HG2_PB_HySA_19930:HG2_PB_pbsv_11021:HG2_PB_PB10Xdip_4737:HG2_PB_PB10Xdip_4736:HG2_PB_SVrefine2PB10Xhap12_8049:HG2_Ill_SVrefine2DISCOVARplusDovetail_1226:HG2_PB_SVrefine2Falcon1plusDovetail_1108;NumClusterSVs=14;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_6758:HG4_PB_assemblyticsfalcon_2351;NumExactMatchSVs=2;ClusterMaxShiftDist=0.135266;ClusterMaxSizeDiff=0.135266;ClusterMaxEditDist=0.342432;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=195;DistBack=108;DistForward=111;DistMin=108;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=299;REFWIDENED=10:8338846-8339144;PctSeqSimilarity=0.9674;PctSizeSimilarity=0.907;PctRecOverlap=0.1395;SizeDiff=-20;StartDistance=175;EndDistance=177;GTMatch=0;TruScore=67;MatchId=500.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:4:31:2:17:./.:6:27:14:40:1/1:1:12:./.:.:.:.:.:.
chr10	8911216	HG2_PB_pbsv_11026	G	GTACCCGCCCCAGGCCAGCCCCCGCGTCCAGGAGGGAGGTGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCTGGAGGTGAGGGGCGCCTCTGCCCGGCTGCCGCTACTGGAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCCATCCGGGAGGGAGGGGGGGGGTCAGCACCCCGCCCGGCAGCCCGCCCGTCTGGGAGGGAGGTGGGGGGGTCAGCCCCCCCCGCCAGCCGCCCTCCGGAGGGAGGTGGGGGGGTCCAGCCCCGCCGGCCAGCGCCCCGTCCGGGAGGGAGGTGGGGGGTCCAGGCCCTCCTGGCCAGCCCCCCCGTCACGGGAGGGAGGTGGGGGGTCAGCCCCTGCCCGGCCAGCTTGCCCCGTCCGGGAGGTGAGGGGGCGCCTCTGCCCCGGCCGCCCCTACTGGGAAGTGGAGGAGCCGCCTCTGTCTGGCCAGCCGCCCCAGTGCCAGGAGGGAAGGTGGGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5287:HG2_PB_PB10Xdip_4752:HG2_PB_PB10Xdip_4753:HG4_PB_pbsv_11057:HG3_PB_pbsv_10752:HG2_PB_pbsv_11026:HG2_PB_SVrefine2Falcon1plusDovetail_1112:HG3_PB_SVrefine2Falcon1Dovetail_6677:HG4_PB_SVrefine2PBcRDovetail_5553:HG2_PB_SVrefine2PBcRplusDovetail_1074:HG3_PB_SVrefine2PBcRDovetail_5154:HG2_PB_SVrefine2PB10Xhap12_8052;NumClusterSVs=12;ExactMatchIDs=HG2_PB_pbsv_11026;NumExactMatchSVs=1;ClusterMaxShiftDist=0.129374;ClusterMaxSizeDiff=0.129374;ClusterMaxEditDist=0.226935;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=484;DistBack=-162;DistForward=84167;DistMin=-162;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=211;REFWIDENED=10:8911149-8911359;PctSeqSimilarity=0.9577;PctSizeSimilarity=0.9778;PctRecOverlap=0.9293;SizeDiff=-11;StartDistance=-30;EndDistance=-30;GTMatch=1;TruScore=95;MatchId=502.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:34:0:17:./.:6:0:1:0:./.:2:1:0/1:10:11:.:.:.
chr10	9406731	HG3_PB_SVrefine2Falcon1Dovetail_6679	GTA	AGCACATAAGCACTTATGCTACATATAAATTATAAGAAGGAAGCAGGGGCCAGGCACGGTGGCTCACACTGGTAATCCAGCACTTTGGGAGGCCGAGGCAGGAGGATCACCTGAGGTCAGGAGTTCGGGGCCAGCCTGGCCCACATGGCAAAACCCTGTCTCTACTAAAAATTCAAAAATTAGCTGGGTGGGGTGGTGCAAACCTGTAATCCCAGCTACTCGGGAGGCTGAGACAGAGGTATCGCTTGAACCCAGGAGGTGGAGTTTGCAGTGAGCTGAGATTGAGCCACTACACTCCAGCTGGGTGACAGACCAAGATTCCATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAGAAGGAAGCAATCAGGTAAATGTAGGTGAAAGGACATTCTAGGCTGAGAAGCAAAACATTAGTGAAGCCCTGAGATATAATCAATCTTGGTGTGTTCAAAGGTTTGAAAGAAGGCTGCATTAGTTTAAGCCTAAGTGAGCATTTTGGGGAGTTAGGCAATAGGAAGGTTGAATGAGGTAACAGAGAGAGATGCTCCGTAACAGGCCTTAGAATTTACCAAGGAGACAGGAGGTCAGTGGTGATGGGAAAGAGACAGAAGTGATGCTTTTGAGAGCACATGTGCTTCACCTTGGAAAGAACTGGAGAAATGAGCTTCTATTAAAACTGAACAAAGGGGAAGAATAATGTGGAAACAGAGAGGGGAGTCTGATAACGGAATGCCAACTGAGTGCTTTTAAAAGTTTCTCAATGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGGGGCGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCTGACATGGTGAAACCCCGTTTCTACTAGAAATACAAAAATTAGCCAGGCATCGTGGTGCGCGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGGTGAATCACTTGAACCCAGGAGGCGGAGGTTGCAGTAAACCGAGATTGAGTCATTGCACTCCAGCTTGGGCAAAACTCCATCTCAAGAAAAAAAAAAAAGTTTCTCAGTAAAATAGGGGACACATTTATCCACAGACCCCCAGTCCAGAGACCATATTGGGTATTTTGGATTGGAGACTTTAAACCATGCTTACATTTGTTAAGATCCTCTTGGGAGTGTTCTTGGTAATCAATGAGAAGTGTACCATGCGCTTGCTATGGTATGCCCCTGTTTAAAAGTGTGTGCCACTGAAGGCATCTTGCAAACATTAGCATTGATAGCATAAATAAGTAATACCCCAAATACTACAAGGCATTTTTTTTCTTAAATAGTATATTCACAGTTACTTTGGAAACGATTTAGCTTTTTTGACTCAGATTGTTATAGCATGCATAGCAAATGAACCTAGCATGTAAATAGCATCCAATGTATTCATGACATGATACATTTCCAAAGATATACACAACAGTTCTAACAATGCTTTTGATTTAAGAAATGCTTGGAAACTTGCTTATATGACAATTGTGCCTATTTTGTGTGATTTCCCCACTGAGTTACATCTGTATCTCTACCAGCAAACCACATCCAACCACCTCCATAATTGTTAAGTGCATGTGATATACACATACAGGCATCTGGATGTCTTCTTTGAATTTAATTATTTTACAAGAGGAAAATATTTTACAATTTCCCTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAGCCTCTGCCTCCCTGGTTTAAGGGATTCTCTCACCTCACCCTCCTGAGAAGCTGGGACTACAGGCGCACACCACCACGCCCAGCTAATTTTTGTAGCTTTTAGTAGAGATGAGGTTTCACCATGCTGGCCAGGATGGTCTCAATCTCTTGACCTCATGATCTGTCTGCCTCGGCCTCCCAGATTTCCATATTTTTTGAAACCATCTGAAACATTTCAGGAACTTTTCTTCTATAAGTATTGATCAGGCTTTCTTTCTCCCATACTAACCTGGAGAAGTCTGGTGGAAAACCCTTTCAAATTAGCCTGTTGAATTAGCAGTAGACAATCTTCATATATATATATACACACACACACACACATATATCAGGTATACATATATATGTATACATATGTGTATATATATGTGTGTGTATATACATATGTGTATACATATATGTGTGTGTGTGCGTGTATGTGTATATATATATAT	20	PASS	ClusterIDs=HG4_PB_pbsv_11061:HG2_10X_SVrefine210Xhap12_7767:HG3_PB_pbsv_10759:HG3_PB_assemblyticsfalcon_2415:HG3_PB_SVrefine2Falcon1Dovetail_6679:HG3_PB_HySA_16620:HG4_PB_HySA_16110:HG2_PB_HySA_19944:HG2_PB_assemblyticsfalcon_2429:HG4_PB_SVrefine2PBcRDovetail_5555:HG4_Ill_SVrefine2DISCOVARDovetail_7882:HG2_PB_SVrefine2PBcRplusDovetail_1076:HG2_PB_SVrefine2Falcon2Bionano_5289:HG4_PB_assemblyticsfalcon_2368:HG2_PB_SVrefine2Falcon1plusDovetail_1114:HG2_Ill_SVrefine2DISCOVARplusDovetail_1228:HG2_PB_SVrefine2PB10Xhap12_8054:HG3_PB_SVrefine2PBcRDovetail_5157:HG2_PB_PB10Xdip_4786:HG2_PB_PB10Xdip_4785:HG2_PB_pbsv_11030;NumClusterSVs=21;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6679:HG3_PB_assemblyticsfalcon_2415;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0526659;ClusterMaxSizeDiff=0.0526659;ClusterMaxEditDist=0.200604;PBcalls=18;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=2236;DistBack=-1;DistForward=29455;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:9406734-9406730;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.996;PctRecOverlap=0.9973;SizeDiff=-9;StartDistance=0;EndDistance=2;GTMatch=0;TruScore=99;MatchId=504.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:137:1/1:2:37:0:38:./.:2:13:1:10:0/1:2:17:1/1:9:321:.:2357:.
chr10	9474846	HG4_Ill_GATKHCSBGrefine_7611	T	TTATTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG4_PB_pbsv_11065:HG4_PB_SVrefine2PBcRDovetail_5558:HG2_PB_HySA_19949:HG2_PB_pbsv_11034:HG2_PB_SVrefine2PB10Xhap12_8057:HG2_PB_PB10Xdip_4787:HG2_PB_assemblyticsfalcon_2432:HG4_PB_HySA_16116:HG2_PB_HySA_19948:HG2_PB_SVrefine2Falcon1plusDovetail_1116:HG4_Ill_MetaSV_489:HG4_Ill_GATKHCSBGrefine_7611:HG2_Ill_MetaSV_466:HG2_Ill_GATKHCSBGrefine_7433;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7433:HG2_Ill_MetaSV_466:HG4_Ill_GATKHCSBGrefine_7611:HG4_Ill_MetaSV_489;NumExactMatchSVs=4;ClusterMaxShiftDist=0.18;ClusterMaxSizeDiff=0.18;ClusterMaxEditDist=0.215852;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=17416;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=10:9474847-9474855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=505.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:28:0|1:29:0:0:26:1|0:0:6:28:0:0/1:33:5:0/1:11:30:.:.:.
chr10	9510981	HG2_PB_PB10Xdip_4788	G	TGCAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7769:HG3_PB_HySA_16623:HG4_PB_pbsv_11066:HG4_PB_HySA_16117:HG2_PB_pbsv_11035:HG4_PB_assemblyticsfalcon_2371:HG3_PB_pbsv_10763:HG3_PB_assemblyticsfalcon_2419:HG2_PB_assemblyticsfalcon_2433:HG2_PB_PB10Xdip_4789:HG2_PB_PB10Xdip_4788:HG2_PB_HySA_19950:HG2_Ill_SVrefine2DISCOVARplusDovetail_1229:HG4_PB_SVrefine2PBcRDovetail_5559:HG2_PB_SVrefine2PB10Xhap12_8058:HG2_PB_SVrefine2Falcon2Bionano_5290:HG3_PB_SVrefine2Falcon1Dovetail_6681:HG2_PB_SVrefine2PBcRplusDovetail_1078:HG3_PB_SVrefine2PBcRDovetail_5160:HG3_Ill_MetaSV_446:HG2_PB_SVrefine2Falcon1plusDovetail_1117:HG4_Ill_MetaSV_490:HG2_Ill_MetaSV_467;NumClusterSVs=23;ExactMatchIDs=HG2_PB_PB10Xdip_4788:HG2_PB_PB10Xdip_4789;NumExactMatchSVs=2;ClusterMaxShiftDist=0.226037;ClusterMaxSizeDiff=0.226037;ClusterMaxEditDist=0.260631;PBcalls=18;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=332;DistBack=36116;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:9510982-9510980;PctSeqSimilarity=0.9896;PctSizeSimilarity=0.9794;PctRecOverlap=0.9823;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=506.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:18:0:26:./.:1:7:1:2:./.:2:13:1/1:2:58:.:.:.
chr10	9896383	HG2_PB_SVrefine2Falcon1plusDovetail_1120	C	CTCTTGAGTTACAGATTTCATATCTCAGAAATTTTAGTTTTTACTGGCAATATAACCTGTTTTGTATCCAAAAGATGATGAAACATAGGAAAGTTTTACTGCAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6685:HG3_PB_pbsv_10768:HG3_PB_assemblyticsfalcon_2426:HG2_PB_pbsv_11039:HG4_PB_pbsv_11069:HG2_PB_assemblyticsfalcon_2437:HG4_PB_assemblyticsfalcon_2376:HG2_Ill_breakscan11_4143:HG2_PB_PB10Xdip_4793:HG2_PB_PB10Xdip_4792:HG2_PB_HySA_19958:HG4_PB_SVrefine2PBcRDovetail_5562:HG4_Ill_manta_2646:HG4_Ill_SVrefine2DISCOVARDovetail_7886:HG4_Ill_MetaSV_493:HG4_Ill_GATKHCSBGrefine_7612:HG4_Ill_Cortex_344:HG4_Ill_250bpfermikitraw_14616:HG4_Ill_150bpfermikitraw_13987:HG3_PB_SVrefine2PBcRDovetail_5165:HG3_Ill_manta_2536:HG3_Ill_Spiral_11499:HG3_Ill_SVrefine2DISCOVARDovetail_8094:HG3_Ill_MetaSV_450:HG3_Ill_GATKHCSBGrefine_7337:HG3_Ill_Cortex_356:HG3_Ill_250bpfermikitraw_14326:HG3_Ill_150bpfermikitraw_13862:HG2_PB_SVrefine2PBcRplusDovetail_1081:HG2_PB_SVrefine2PB10Xhap12_8061:HG2_PB_SVrefine2Falcon2Bionano_5294:HG2_PB_SVrefine2Falcon1plusDovetail_1120:HG2_Ill_manta_3110:HG2_Ill_SpiralSDKrefine_1525:HG2_Ill_SVrefine2DISCOVARplusDovetail_1232:HG2_Ill_MetaSV_470:HG2_Ill_GATKHCSBGrefine_7434:HG2_Ill_Cortex_737:HG2_Ill_250bpfermikitraw_14733:HG2_Ill_150bpfermikitraw_13831:HG2_10X_SVrefine210Xhap12_7774;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7774:HG2_Ill_150bpfermikitraw_13831:HG2_Ill_250bpfermikitraw_14733:HG2_Ill_Cortex_737:HG2_Ill_GATKHCSBGrefine_7434:HG2_Ill_MetaSV_470:HG2_Ill_SVrefine2DISCOVARplusDovetail_1232:HG2_Ill_SpiralSDKrefine_1525:HG2_Ill_manta_3110:HG2_PB_SVrefine2Falcon1plusDovetail_1120:HG2_PB_SVrefine2Falcon2Bionano_5294:HG2_PB_SVrefine2PB10Xhap12_8061:HG2_PB_SVrefine2PBcRplusDovetail_1081:HG3_Ill_150bpfermikitraw_13862:HG3_Ill_250bpfermikitraw_14326:HG3_Ill_Cortex_356:HG3_Ill_GATKHCSBGrefine_7337:HG3_Ill_MetaSV_450:HG3_Ill_SVrefine2DISCOVARDovetail_8094:HG3_Ill_Spiral_11499:HG3_Ill_manta_2536:HG3_PB_SVrefine2PBcRDovetail_5165:HG4_Ill_150bpfermikitraw_13987:HG4_Ill_250bpfermikitraw_14616:HG4_Ill_Cortex_344:HG4_Ill_GATKHCSBGrefine_7612:HG4_Ill_MetaSV_493:HG4_Ill_SVrefine2DISCOVARDovetail_7886:HG4_Ill_manta_2646:HG4_PB_SVrefine2PBcRDovetail_5562;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0807175;ClusterMaxSizeDiff=0.0717489;ClusterMaxEditDist=0.229075;PBcalls=16;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=109;DistBack=43933;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:9896384-9896385;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=507.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:75:1/1:2:24:1:40:1/1:0:24:0:24:1/1:0:33:./.:.:.:.:.:.
chr10	9904392	HG3_PB_assemblyticsfalcon_2427	AGACTTTTAACTTTT	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGCTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_19959:HG4_PB_pbsv_11070:HG3_PB_pbsv_10769:HG2_PB_pbsv_11040:HG4_PB_assemblyticsfalcon_2377:HG3_PB_assemblyticsfalcon_2427:HG2_PB_assemblyticsfalcon_2438:HG2_Ill_breakscan11_4144:HG3_PB_SVrefine2Falcon1Dovetail_6686:HG2_PB_SVrefine2Falcon1plusDovetail_1121;NumClusterSVs=10;ExactMatchIDs=HG3_PB_assemblyticsfalcon_2427:HG4_PB_assemblyticsfalcon_2377;NumExactMatchSVs=2;ClusterMaxShiftDist=0.138973;ClusterMaxSizeDiff=0.138973;ClusterMaxEditDist=0.178187;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=302;DistBack=5857;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:9904407-9904391;PctSeqSimilarity=0.9754;PctSizeSimilarity=0.9096;PctRecOverlap=0.952;SizeDiff=-30;StartDistance=0;EndDistance=14;GTMatch=0;TruScore=94;MatchId=508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:38:1|0:2:35:43:0:./.:13:0:9:5:0/1:26:7:0/1:14:32:.:.:.
chr10	10135356	HG3_Ill_GATKHCSBGrefine_7338	T	TCATTCAGATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4145:HG2_PB_pbsv_11042:HG4_PB_pbsv_11072:HG4_PB_assemblyticsfalcon_2379:HG3_PB_pbsv_10771:HG3_PB_assemblyticsfalcon_2430:HG2_PB_assemblyticsfalcon_2440:HG2_PB_HySA_19961:HG3_PB_HySA_16636:HG2_PB_SVrefine2Falcon1plusDovetail_1122:HG4_PB_HySA_16124:HG4_Ill_MetaSV_494:HG4_Ill_GATKHCSBGrefine_7613:HG3_PB_SVrefine2PBcRDovetail_5166:HG3_Ill_MetaSV_451:HG3_Ill_GATKHCSBGrefine_7338:HG2_Ill_MetaSV_471:HG2_PB_SVrefine2PB10Xhap12_8062;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_MetaSV_471:HG3_Ill_GATKHCSBGrefine_7338:HG3_Ill_MetaSV_451:HG3_PB_SVrefine2PBcRDovetail_5166:HG4_Ill_GATKHCSBGrefine_7613:HG4_Ill_MetaSV_494;NumExactMatchSVs=6;ClusterMaxShiftDist=0.162246;ClusterMaxSizeDiff=0.159126;ClusterMaxEditDist=0.204978;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=58331;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=10:10135357-10135369;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:42:0|1:31:0:0:41:0|1:18:0:0:6:0/1:30:12:0/1:5:31:.:.:.
chr10	11149944	HG2_PB_SVrefine2Falcon1plusDovetail_1127	T	TCCCCACTTCCCTCCCTCCCTCTCCCCCTTCTTCCCCTCCCCTTCCCACTTCCCCTTCTTCCCCTCCCCTTCCCCACTTCCCCCTTCTTCCCCCCCTTCCCCACTTCCCCTTCTTCCCCTTCCTACTCCCCCTCCCCCTTCCCACTCCCCCTTCCCTTCCCACTCCCCCTTCCCCTTCCCACTCCCCCTTCCCACTTCCCACTCCCCCCTTCCCCTTCCTACTCCCCCTTCCCCCTCTTCCTACTGCCCCTTCTCCCTCTTCCTACTTTCTACTCTCCCTTCTCCTTCCCCCTACCGTCTTCCCCTCTCCCCCTCTCCCTACTCCCTCCATCTCCGCCTCTCCCCACTCCCCACTCCCTCCCTCTCCCTACTCCCCACTCCCTCCTTCTCCCCCTCTCCCCACTCCCTCCCTCTCCCCTCTCCCTCTCTCCCCACTCTCTCCCTCTCCCCACTCCGCACTCCCTCCCTCTCCCCCCTCCCCACTCCCCACTCCCTCCCTCTTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5300:HG3_PB_HySA_16647:HG2_PB_pbsv_11051:HG2_PB_PB10Xdip_2904:HG2_PB_PB10Xdip_2903:HG4_PB_HySA_16130:HG2_PB_HySA_19972:HG3_PB_pbsv_10778:HG4_PB_assemblyticsfalcon_2389:HG3_PB_SVrefine2PBcRDovetail_5171:HG2_PB_SVrefine2PBcRplusDovetail_1085:HG2_PB_SVrefine2PB10Xhap12_8070:HG2_PB_SVrefine2Falcon1plusDovetail_1127:HG3_PB_SVrefine2Falcon1Dovetail_6693:HG3_PB_assemblyticsfalcon_2440:HG4_PB_pbsv_11080;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1127;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115079;ClusterMaxSizeDiff=0.115079;ClusterMaxEditDist=0.1917;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=503;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=10:11149945-11149950;PctSeqSimilarity=0.9903;PctSizeSimilarity=0.9824;PctRecOverlap=0.9805;SizeDiff=-9;StartDistance=-5;EndDistance=-5;GTMatch=1;TruScore=98;MatchId=510.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:41:1/1:2:9:2:29:./.:6:95:3:58:./.:0:1:./.:2:33:.:.:.
chr10	11411709	HG4_Ill_150bpfermikitraw_14000	A	ATGGTCTTCCAGATGGTATACAAGCTTCTGCATTGGGGGTGGTCTTCAAGATGGTATACAAGCTTCTGCATTGGGGGTGGTCTTCAAGATGGTATATGAGCTTCTGCCTTGGGGGTGGTCTCTAAGATGGTATATGAGCTTCTGCCTTGGGGGTGGTCTCCAAGATGGTATACAAGCTTCTGCATTGGGGGTGGTCTTCCAGATGGTATACGAGCCTCTGCATGGGGATGGTCTTCCAGATGGTATACAAGCTTCTGCATTGGGGG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_7896:HG4_Ill_GATKHC_17727:HG2_PB_pbsv_11056:HG2_PB_HySA_19980:HG4_PB_HySA_16132:HG4_Ill_150bpfermikitraw_14000:HG2_Ill_GATKHC_17678:HG4_PB_pbsv_11085:HG4_PB_SVrefine2PBcRDovetail_5570:HG2_PB_SVrefine2Falcon1plusDovetail_1132;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHC_17678:HG4_Ill_150bpfermikitraw_14000:HG4_Ill_GATKHC_17727;NumExactMatchSVs=3;ClusterMaxShiftDist=0.056391;ClusterMaxSizeDiff=0.0526316;ClusterMaxEditDist=0.261194;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=265;DistBack=-1;DistForward=73256;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=453;REFWIDENED=10:11411304-11411756;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=511.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:23:0|1:13:2:1:19:1|0:1:61:19:0:0/1:12:7:./.:.:.:.:.:.
chr10	12334056	HG2_Ill_breakscan11_4146	T	TAAAAAATTCTGAGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4146:HG3_PB_pbsv_10788:HG2_PB_SVrefine2Falcon1plusDovetail_1137:HG2_PB_pbsv_11062:HG3_PB_SVrefine2Falcon1Dovetail_6699:HG3_PB_assemblyticsfalcon_2453:HG4_PB_assemblyticsfalcon_2400:HG2_PB_HySA_19989;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_breakscan11_4146;NumExactMatchSVs=1;ClusterMaxShiftDist=0.209553;ClusterMaxSizeDiff=0.206471;ClusterMaxEditDist=0.289362;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=331;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=10:12334057-12334072;PctSeqSimilarity=0.994;PctSizeSimilarity=0.9881;PctRecOverlap=0.9881;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:24:./.:8:14:19:11:./.:13:0:1:9:./.:26:2:0/1:7:24:.:.:.
chr10	12373317	HG2_PB_SVrefine2PBcRplusDovetail_1091	T	TTAAAATAAAGTGTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTGACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCGCTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAATAAAATAAAATAAAATAAAATAAAATAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_16670:HG3_PB_pbsv_10789:HG2_PB_pbsv_11063:HG4_PB_assemblyticsfalcon_2401:HG3_PB_assemblyticsfalcon_2454:HG2_Ill_breakscan11_4147:HG4_PB_pbsv_11090:HG2_PB_PB10Xdip_2990:HG2_PB_PB10Xdip_2989:HG2_PB_SVrefine2Falcon2Bionano_5306:HG3_PB_SVrefine2PBcRDovetail_5178:HG3_PB_SVrefine2Falcon1Dovetail_6700:HG3_Ill_MetaSV_460:HG3_Ill_GATKHCSBGrefine_7351:HG2_PB_SVrefine2PBcRplusDovetail_1091:HG2_PB_SVrefine2PB10Xhap12_8079:HG2_PB_SVrefine2Falcon1plusDovetail_1138:HG2_Ill_MetaSV_478:HG2_Ill_GATKHCSBGrefine_7447:HG2_10X_SVrefine210Xhap12_7784:HG4_Ill_manta_2652:HG4_Ill_GATKHCSBGrefine_7628:HG4_PB_SVrefine2PBcRDovetail_5574:HG4_PB_HySA_16143:HG2_PB_HySA_19990;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7784:HG2_Ill_GATKHCSBGrefine_7447:HG2_Ill_MetaSV_478:HG2_PB_SVrefine2Falcon1plusDovetail_1138:HG2_PB_SVrefine2PB10Xhap12_8079:HG2_PB_SVrefine2PBcRplusDovetail_1091:HG3_Ill_GATKHCSBGrefine_7351:HG3_Ill_MetaSV_460:HG3_PB_SVrefine2Falcon1Dovetail_6700:HG3_PB_SVrefine2PBcRDovetail_5178;NumExactMatchSVs=10;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.207002;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=337;DistBack=11905;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:12373318-12373332;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=513.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:1:8:0:13:1/1:0:6:0:10:1/1:0:26:1/1:2:80:.:.:.
chr10	12457207	HG4_Ill_GATKHCSBGrefine_7629	T	TAAAAACAAAGTGGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5308:HG4_PB_HySA_16146:HG4_PB_pbsv_11092:HG3_PB_assemblyticsfalcon_2457:HG3_PB_SVrefine2Falcon1Dovetail_6702:HG2_PB_HySA_19994:HG2_PB_pbsv_11066:HG4_Ill_MetaSV_501:HG4_PB_SVrefine2PBcRDovetail_5576:HG4_Ill_GATKHCSBGrefine_7629:HG2_PB_SVrefine2Falcon1plusDovetail_1140:HG2_Ill_breakscan11_4149;NumClusterSVs=12;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_7629:HG4_PB_SVrefine2PBcRDovetail_5576;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0777605;ClusterMaxSizeDiff=0.0777605;ClusterMaxEditDist=0.140673;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=314;DistBack=1599;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=10:12457208-12457219;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=514.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:15:12:0|1:17:0:0:11:1|0:0:12:23:0:0/1:18:13:0/1:7:42:.:1105:.
chr10	12667645	HG2_PB_pbsv_11073	T	TTTTTTTTTTTTTTTGTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGATGCGGACTGCAGTGGCGCAATCTCGGCTCCACTGCAAGCTGCCGCTTCCGGGTTTCACGCCATTTCTCCTGCCTCAGCCTCCCGCAGTAGCTGGGGACTAACAGGCGCCCGCCACCTGCGCCCGGCTAATTTTTGTTATTTTTAGTAGCAGACGGGGTTTCACCTTGTTAGCCAGAGGTTCTCGATCTCCTGACGCTCAGTGATCACCCCGCCTCGGCCCTCCCAAGGGCTGGATACAGGCGGTGAGCCACCCGCCGGCCCGGCCCCCTCTGCCCATTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8085:HG2_PB_HySA_20001:HG2_PB_pbsv_11073:HG2_PB_PB10Xdip_3000:HG2_PB_SVrefine2PBcRplusDovetail_1096:HG2_PB_SVrefine2Falcon1plusDovetail_1145:HG3_PB_pbsv_10798;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_11073;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147436;ClusterMaxSizeDiff=0.141026;ClusterMaxEditDist=0.295345;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=331;DistBack=14;DistForward=47249;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=10:12667646-12667646;PctSeqSimilarity=0.951;PctSizeSimilarity=0.9819;PctRecOverlap=0.9366;SizeDiff=6;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=95;MatchId=515.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:./.:17:11:3:9:./.:32:0:7:5:0/1:26:4:0/1:9:5:.:.:.
chr10	12867143	HG4_Ill_250bpfermikitraw_14638	G	GTTGCGGTTTCTTCCATTAAAATTGCCATGAGATTTGAAAATAGTTTTTATTTTCCTAGTATTGGTACTTTTGTCTGAAAGATTTAGGTTGGGGCAAAAGTAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7789:HG4_PB_pbsv_11098:HG4_PB_assemblyticsfalcon_2414:HG2_PB_PB10Xdip_3054:HG2_PB_PB10Xdip_3053:HG4_PB_SVrefine2PBcRDovetail_5578:HG4_Ill_manta_2653:HG4_Ill_MetaSV_503:HG4_Ill_GATKHC_17748:HG4_Ill_GATKHCSBGrefine_7633:HG4_Ill_250bpfermikitraw_14638:HG4_Ill_150bpfermikitraw_14018:HG3_Ill_MetaSV_465:HG2_Ill_MetaSV_483:HG3_PB_SVrefine2PBcRDovetail_5183:HG3_Ill_manta_2541:HG3_Ill_Spiral_11518:HG3_Ill_GATKHC_17624:HG3_Ill_GATKHCSBGrefine_7356:HG2_Ill_manta_3115:HG2_Ill_GATKHC_17709:HG2_Ill_GATKHCSBGrefine_7454:HG3_PB_pbsv_10801:HG2_PB_pbsv_11077:HG2_PB_SVrefine2PBcRplusDovetail_1098:HG2_PB_SVrefine2PB10Xhap12_8087:HG4_Ill_SVrefine2DISCOVARDovetail_7911:HG3_PB_SVrefine2Falcon1Dovetail_6708:HG3_Ill_SVrefine2DISCOVARDovetail_8112:HG2_PB_SVrefine2Falcon2Bionano_5314:HG2_Ill_SVrefine2DISCOVARplusDovetail_1253;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_MetaSV_483:HG3_Ill_MetaSV_465:HG4_Ill_150bpfermikitraw_14018:HG4_Ill_250bpfermikitraw_14638:HG4_Ill_GATKHCSBGrefine_7633:HG4_Ill_GATKHC_17748:HG4_Ill_MetaSV_503:HG4_Ill_manta_2653:HG4_PB_SVrefine2PBcRDovetail_5578;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0947867;ClusterMaxSizeDiff=0.0853081;ClusterMaxEditDist=0.239631;PBcalls=12;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=102;DistBack=-28;DistForward=2291;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=48;REFWIDENED=10:12867124-12867171;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:43:1/1:3:21:3:18:1/1:2:22:0:23:1/1:1:40:./.:.:.:.:.:.
chr10	13283640	HG2_PB_SVrefine2Falcon1plusDovetail_1150	C	CTCTCCCTATGTTGCCCAGAATGGCCTTGAACTCCTGGGCTCAAGCAATCCTGCTGCCACGGCCTCCCAAAGTGCTAGGATTACAGGCATGCACCACCACATGTGGCTGGGGTCATTTTTTGAAACGTAAACATTGAAGGAGGTAGCACCCTATATCCTGATCTCTGTGGAAAGGTAGGGGCATGAATTCAGCAGACACCCTACTCTGAGTTGTGAGGACCAAACATAGTGGCCTATGATTACCAACCCCTGAAGCTCTTTAAACCACTCCAGCTCTTTAGTTCAGCAGAATCGAGCCCAGGTTCTCTCCTCTATTGCACAAGTCTTTTATTATTATTATTTTTAAAATAGAGACGGGGGT	20	PASS	ClusterIDs=HG3_Ill_Spiral_11527:HG4_PB_pbsv_11105:HG3_PB_HySA_16691:HG2_PB_HySA_20019:HG4_Ill_MetaSV_506:HG4_Ill_GATKHCSBGrefine_7637:HG3_Ill_manta_2543:HG3_Ill_MetaSV_470:HG2_Ill_manta_3118:HG2_Ill_MetaSV_488:HG2_PB_pbsv_11085:HG3_PB_pbsv_10810:HG2_PB_PB10Xdip_3065:HG2_PB_PB10Xdip_3064:HG4_PB_HySA_16162:HG4_Ill_GATKHCSBGrefine_7636:HG3_PB_SVrefine2Falcon1Dovetail_6713:HG4_PB_SVrefine2PBcRDovetail_5582:HG4_Ill_SVrefine2DISCOVARDovetail_7916:HG3_Ill_SVrefine2DISCOVARDovetail_8118:HG2_PB_SVrefine2PB10Xhap12_8090:HG2_PB_SVrefine2Falcon1plusDovetail_1150:HG2_10X_SVrefine210Xhap12_7793:HG3_PB_SVrefine2PBcRDovetail_5188:HG2_PB_SVrefine2PBcRplusDovetail_1102:HG2_PB_SVrefine2Falcon2Bionano_5318:HG2_Ill_SVrefine2DISCOVARplusDovetail_1258:HG4_Ill_Spiral_903;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7793:HG2_PB_SVrefine2Falcon1plusDovetail_1150:HG2_PB_SVrefine2PB10Xhap12_8090:HG3_Ill_SVrefine2DISCOVARDovetail_8118:HG4_Ill_SVrefine2DISCOVARDovetail_7916:HG4_PB_SVrefine2PBcRDovetail_5582;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0672043;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.259162;PBcalls=15;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=360;DistBack=22883;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=82;REFWIDENED=10:13283641-13283722;PctSeqSimilarity=0.991;PctSizeSimilarity=1;PctRecOverlap=0.9169;SizeDiff=0;StartDistance=-30;EndDistance=-30;GTMatch=0;TruScore=96;MatchId=517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:28:0:20:1/1:0:19:0:16:1/1:0:27:./.:4:48:.:.:.
chr10	14396683	HG2_PB_HySA_20028	C	CACAAAACTCCAGTGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCGGGAGGCGGAGCTTGCAGTGAGCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4150:HG2_PB_HySA_20028:HG2_PB_SVrefine2PB10Xhap12_8091:HG2_PB_PB10Xdip_3323:HG3_PB_HySA_16702:HG2_PB_SVrefine2Falcon1plusDovetail_1151:HG2_Ill_MetaSV_490:HG2_PB_SVrefine2PBcRplusDovetail_1103:HG2_PB_pbsv_11086:HG2_PB_PB10Xdip_3324:HG3_PB_pbsv_10811;NumClusterSVs=11;ExactMatchIDs=HG2_PB_HySA_20028;NumExactMatchSVs=1;ClusterMaxShiftDist=0.201653;ClusterMaxSizeDiff=0.201653;ClusterMaxEditDist=0.218182;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=135703;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=10:14396684-14396684;PctSeqSimilarity=0.9874;PctSizeSimilarity=0.9874;PctRecOverlap=0.9875;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=518.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:38:./.:8:24:10:11:./.:28:0:1:8:0/1:32:8:0/1:6:24:.:.:.
chr10	14484817	HG4_PB_HySA_16174	T	TCCGGGCGCGTGGCTCACGCCGTAATCCCAGCACTTTGGGAGCCGGGCGGCGATATAAGAGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAACCCCGTCTCTACTAAAATACAAAAAATTAGCGGGCGTAGTGGGGGCGCCTGTAGTCCCAGCTACCTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCGGGAGGCGAGCTTGCAGTGAGCCGAGATCCCCACTGCACTCCACCTGGCGACAGAGCGAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGGAATGTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4151:HG4_PB_HySA_16174:HG3_PB_HySA_16703:HG3_PB_pbsv_10812:HG2_Ill_MetaSV_492:HG4_PB_pbsv_11109:HG3_PB_assemblyticsfalcon_2482:HG3_PB_SVrefine2PBcRDovetail_5190:HG4_PB_SVrefine2Falcon1Dovetail_6769:HG2_PB_HySA_20029:HG3_PB_SVrefine2Falcon1Dovetail_6714;NumClusterSVs=11;ExactMatchIDs=HG4_PB_HySA_16174;NumExactMatchSVs=1;ClusterMaxShiftDist=0.224359;ClusterMaxSizeDiff=0.224359;ClusterMaxEditDist=0.269481;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=304;DistBack=-3652;DistForward=2414;DistMin=-3652;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=10:14484818-14484817;PctSeqSimilarity=0.9557;PctSizeSimilarity=0.959;PctRecOverlap=0.9306;SizeDiff=-13;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=94;MatchId=520.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:31:0|1:40:6:0:29:0|1:23:0:0:10:0/1:31:13:0/1:13:10:.:.:.
chr10	15191046	HG2_PB_SVrefine2PB10Xhap12_8096	G	GCCACCACCACCGCCACCACCACCACCATCATCACCATCACCATATCATTACTAACATCGTCACCATTATCATCATCACCACCATCGCCACTACCATTGATTGCCATCACCACCATCACTGCCGCCATCACCACCACCACTGCCACCATCATCACCACCATCATCACCATCATATCATTACTACCATCATTGCCACTGTCATCATCACCATCACCATCGCCACTACCATTGCCATCACCACCATCACTGCCACCATCATCACCATCACCATCATCACCACCATCACATCATCATCACCACCATCATCACCATTATCATCACCATCATCACCACCATTGCCACTACCATTGCCATCACCACCATCACTGCCACCATCATCACCATCACCATCATCACCACCATCACATCATCACCACCATCATCACCATTATCATCACTGTCATCACCACTACCATCGCCACTACCATCGCCATCACCATCACTGCCACCATCATTATCACCATCATCACCACCACCATCACTACCCCATCATCGTCACCATCACCATAATCACCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6717:HG2_PB_PB10Xdip_3334:HG4_PB_pbsv_11114:HG2_PB_PB10Xdip_3333:HG2_Ill_breakscan11_4152:HG2_PB_pbsv_11094:HG3_PB_pbsv_10817:HG4_PB_SVrefine2PBcRDovetail_5587:HG4_Ill_SVrefine2DISCOVARDovetail_7924:HG2_PB_SVrefine2PBcRplusDovetail_1107:HG2_PB_SVrefine2PB10Xhap12_8096:HG2_PB_SVrefine2Falcon1plusDovetail_1155:HG3_PB_SVrefine2PBcRDovetail_5194:HG2_PB_SVrefine2Falcon2Bionano_5322:HG4_PB_SVrefine2Falcon1Dovetail_6770;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1155:HG2_PB_SVrefine2PB10Xhap12_8096:HG2_PB_SVrefine2PBcRplusDovetail_1107:HG4_PB_SVrefine2PBcRDovetail_5587;NumExactMatchSVs=4;ClusterMaxShiftDist=0.249077;ClusterMaxSizeDiff=0.247232;ClusterMaxEditDist=0.350554;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=554;DistBack=1951;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=572;REFWIDENED=10:15191047-15191618;PctSeqSimilarity=0.9533;PctSizeSimilarity=0.9693;PctRecOverlap=0.2721;SizeDiff=17;StartDistance=-395;EndDistance=-395;GTMatch=0;TruScore=73;MatchId=521.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:0:19:2:22:1/1:0:405:4:342:./.:2:3:1/1:1:62:.:.:.
chr10	15220386	HG3_PB_SVrefine2Falcon1Dovetail_6718	TA	GAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGTTCACGCCATTCTCCTGCCTCAGCCTCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAAAAATTTTTTTTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1156:HG4_PB_SVrefine2Falcon1Dovetail_6771:HG3_PB_assemblyticsfalcon_2489:HG3_PB_SVrefine2Falcon1Dovetail_6718:HG2_PB_HySA_20038:HG2_PB_pbsv_11095:HG2_PB_SVrefine2Falcon2Bionano_5323:HG3_PB_pbsv_10818:HG2_PB_assemblyticsfalcon_2503;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6718:HG3_PB_assemblyticsfalcon_2489;NumExactMatchSVs=2;ClusterMaxShiftDist=0.149847;ClusterMaxSizeDiff=0.149847;ClusterMaxEditDist=0.244648;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=300;DistBack=-1;DistForward=30912;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:15220388-15220385;PctSeqSimilarity=0.9502;PctSizeSimilarity=0.9119;PctRecOverlap=0.9119;SizeDiff=-29;StartDistance=15;EndDistance=16;GTMatch=0;TruScore=92;MatchId=522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:26:1|0:0:26:32:1:./.:15:1:1:2:./.:28:2:0/1:6:11:.:.:.
chr10	15251300	HG3_PB_SVrefine2Falcon1Dovetail_6719	T	TTTTTTTTTTTTGAGACGGAGCTTCGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACCGCAACCTCTGCCTCCCGGCTCAAGCAATTCCTGCCTCAGCCTCCCGAGTAGCTAGGATTACAGGCATGTGCCACCACCCCAGCTAATTTTGTATTTTAATAAGAGACGGTGTTTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCCGACCTCAGGTGATCCACACGCCTTGGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCCCAGCAAACACTTTCATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGACTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGTCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTCACCAGGATGGACTCGGTCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCCCATACACTTTGATAAATTCCTCCCAAGTCCTGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCCGGCGGATCACTAGGTCAGGAGACGGAGACCATCCTGGCGAACACGGTCAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGACGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGCAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACACAGAGCGAGACTCCGTCTCAAAAAAATAAATAAATAAATAAATAAATAAATACATAAATAAATAAATAAATAAATAAAAATTCCTCCCAAGTCCTGCAGCCAAATCTGCACCAAGAGAAGCTCTCTGATTTTTTCCCCAACGAACATTGCCTATCTTGCACCCTGAGTTACCACCAAAGCCTGTGAACAATTTCACCTGGACTTTTCTGTGCTAATTAGGGGTTTCCAACTGAAGCCTCAAAAAGTTAAAGAAATCTTAATGAAATAAACGTTATGATTTGGAGCTCTCATTGCTAACATAGAAGGCCATTTAGAATACAGTATCTAGTAAGAGAAGGAGACTGAGCACGGAGTGGGCATCCTTGTGTAGAAGTATTTATTTGGGTAAAGCACAAAATGTCAGCTATAGTTGTGTCTGGATGGTAGTTTTTGGTGACCGTGATTTTTAAATTCTTTTTATATTTGTACTTTCTAATTTTTCAAAGAATGATGAGTGTAATGTATAAAATATGCACTTTTTTGGACATCAGTGGAAAAACTGGTGAAGTGGTTTAGTTCATAGTATCGTGCTGGTGTTGATTTCTTATTTTGACAAATGTTCATGGTTCTGTAAGAAGGTAACCCCAGGGAAGCTGGATGAAGGATAAAGGAACTCTCTGTACTATTTTTGCAACTTAAAATAATTTCAGAATAAAAAGACTTAAAAAGGCCAGGCACGATGGCTCACGCCTATAATCTCAGCACTTTGGGAGGCCGAGGTGGGTGGATCATCCGAGGTCATGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATATAAAAAACTAGCTGGGGATGGTGGTGCGTGCCTGTAGTCCCAGCTACTCGGAGGCTGAGGCGAGAATCGCTTGAACCCGGGAGGTGGAAGTTGCAGTGAGCTGAGATCATGCCCTTGCACTACAGCCTGGGCGACAGAGCAAGACTGTCTCAAAAGGCTTAAAAAAATAAAAATAAAAAATAAAAAGCAAGAGACTAGGTTTTGGAGTCAGGTAGACCTTGGTTCGTGCATGGTTTGTTCCCTTCTAGTGGGCGGCATGCTGGAGTGGACTTAGGAGTGATGATCTACAATTTCAGGGATTTTGCAGGTCAGTTACTAGACGCAGTCATTTTTAAAAATTAAATATTACAAGTTTACAATTAAATATACCAAAACAAAGGTAATTACTTAAAACTCATTTCCCATTTACTTGAGCCTATTAAATGATTATCCGCAGTTATGTTCTATAAAGTTGCCGCGAACACTGAAACTAGTGAGTGCAATACTAGAACCCTTGCTTCTGGGGAACTACAGAAAAAGGTATTTCCTGTGAAGGTTTAGTCCAGGCCTACAGCTCTCCAGAGCTATGCTGGAAAGGTGGGGCCTCCTGAAATCCTCTGGACACATATTTCCATCAGCCTGCTCAACATATAACCTTGTTTTATACCTTTCCGTTTAAAGACGTCTCATTTAATATATATAGTTGTTCATGAACATTGCACTCACAGCCAACAGCACTACAACTCACGCTCAGTAACACATGATTTCTCTGTAAGGCAAATCCCGGCTTTCCCACGCTTAGGAACGCTAGCCAGCACTTAAGCACTGTATTTGGAGGCCATTTTAAACAGTGAGGTCACCAAGCAAAAGCACAGAAATCTAGAAAATGAAGCACAGCATAGACGTGAAAGGGACACCTATTTACAGCATGACAGCTGAACAAGAAGGCAAAGCGTTGCCATGTTTGACCGCAGCTGAAAACGTGCGTGTGGGGCAACGAATCCTTCATCCCTCTACACATCCCCTTAAATGACCACGAAAACACAGTGAGTATTGATTTTGGTGCTGCAAAATACACAGTTGATCCTCGGTATGCATGGATTCCATCTTTGCGAATTTCTACTTGCTAGTTATAGCTTAGTTTTTGCTTGCTAAAACTAGCAAGTAGAAATTCGCAAAGATGGAATCCATGCATACCGAGGATCAACTGTGTATTTTATTATCTGAGGTTATTTCCCTGCCTTGTATCTGTTTAGTGGAAATAGAACTGTGCTACCATGGATCTCTTCCCACCTCTTGTGTGCAGTGACTCAGGTCACCCTAGTTACTTGTAATTGACCACAGTGGGAGGATTTACACTATGGAAATTGGCAAATGCTACAATCGGGGCTTGGTTTGTTGATTTTCTCCATCACTTTCTTAAACCTAGACAATGTTAGTGATGCAGATTCACCTTAAAACTGTATCATACCTGGAGCCATTATACTTCAAATAATACAAAAAGTTGAGGAAATGTTCCAGTATTCAAAAACTGCTGAATACTGATTCAGCAAAGTAGTCACTCCATGATTGATGAACAAATGACATTCTGAGGGGGTTTCAATGTCACCTTAATCATTAATACAATAAAATGACAAAATGAGGCCAGGTATGATGGCTTACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAGCCCCATCTCTACTAAAAAAATACAAAAATTATCTGGGCATGGTGGTATACATATGTAGTACCAGCTATTCAGGAGGCTGAGCAGCAGAATCTCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGAGTTGGTGCCACTGCATTCCAACCTGGGTGACAGAGTGAGATTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGACAAAATCATGTCAGAGCTACACTCTTGTCAATCGTAACAAGACTGGCTATGACAAAATCTATGAAAGCATTGTGAGAACCAATCATTAAAGAGAATTTACAACGGAATATTATGTATTTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5196:HG3_PB_pbsv_10819:HG3_PB_HySA_16709:HG2_PB_HySA_20040:HG2_PB_pbsv_11096:HG2_PB_PB10Xdip_3335:HG2_PB_PB10Xdip_3336:HG4_PB_pbsv_11115:HG2_PB_HySA_20039:HG2_PB_assemblyticsfalcon_2504:HG3_PB_assemblyticsfalcon_2490:HG4_PB_SVrefine2Falcon1Dovetail_6772:HG2_PB_SVrefine2Falcon2Bionano_5324:HG2_PB_SVrefine2PBcRplusDovetail_1108:HG2_PB_SVrefine2PB10Xhap12_8097:HG2_10X_SVrefine210Xhap12_7800:HG4_Ill_SVrefine2DISCOVARDovetail_7925:HG2_Ill_SVrefine2DISCOVARplusDovetail_1268:HG4_PB_SVrefine2PBcRDovetail_5588:HG3_PB_SVrefine2Falcon1Dovetail_6719:HG2_PB_SVrefine2Falcon1plusDovetail_1157;NumClusterSVs=21;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6719;NumExactMatchSVs=1;ClusterMaxShiftDist=0.218162;ClusterMaxSizeDiff=0.218162;ClusterMaxEditDist=0.268516;PBcalls=18;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=3774;DistBack=30912;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7720;REFWIDENED=10:15251301-15241579;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.9968;PctRecOverlap=0.9646;SizeDiff=-12;StartDistance=-128;EndDistance=-128;GTMatch=0;TruScore=98;MatchId=523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:91:1/1:0:24:1:32:./.:7:2:3:1:0/1:2:15:1/1:3:458:.:3873:.
chr10	15983302	HG4_Ill_150bpfermikitraw_14059	T	TATGTCTAGACATATATACGTGTGTATATATGTCTAGACATATATACGTGTGTACATAC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13892:HG4_Ill_GATKHC_17796:HG4_Ill_GATKHCSBGrefine_7646:HG2_Ill_GATKHC_17756:HG2_Ill_GATKHCSBGrefine_7469:HG4_PB_HySA_16190:HG4_Ill_svaba_13884:HG4_PB_pbsv_11120:HG4_Ill_Krunchall_15372:HG2_PB_pbsv_11101:HG4_Ill_250bpfermikitraw_14674:HG4_Ill_150bpfermikitraw_14059:HG2_Ill_svaba_13793:HG2_Ill_Krunchall_15097:HG2_Ill_250bpfermikitraw_14787;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13892:HG4_Ill_svaba_13884:HG4_Ill_Krunchall_15372:HG4_Ill_250bpfermikitraw_14674:HG4_Ill_150bpfermikitraw_14059:HG2_Ill_svaba_13793:HG2_Ill_Krunchall_15097:HG2_Ill_250bpfermikitraw_14787;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0683761;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.275862;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=7;DistForward=17;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=17;REFWIDENED=10:15983301-15983320;PctSeqSimilarity=0.9869;PctSizeSimilarity=0.9828;PctRecOverlap=0.678;SizeDiff=1;StartDistance=-18;EndDistance=-18;GTMatch=0;TruScore=88;MatchId=524.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:35:./.:37:9:7:21:1|0:0:30:20:1:0/1:22:9:./.:.:.:.:.:.
chr10	16764854	HG2_PB_assemblyticsfalcon_2517	T	TATACATATATGTATATATACACACATATACATATATGTATATATACACAC	10	PASS	ClusterIDs=HG2_PB_pbsv_11104:HG3_PB_assemblyticsfalcon_2501:HG3_PB_HySA_16721:HG2_PB_assemblyticsfalcon_2517:HG2_PB_HySA_20056:HG2_PB_PB10Xdip_3366:HG2_PB_PB10Xdip_3365;NumClusterSVs=7;ExactMatchIDs=HG2_PB_assemblyticsfalcon_2517:HG3_PB_assemblyticsfalcon_2501;NumExactMatchSVs=2;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.254545;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=50;DistBack=5;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=10:16764853-16764858;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:1/1:3:19:1:12:1/1:2:26:1:30:./.:5:65:./.:.:.:.:.:.
chr10	17522872	HG2_Ill_breakscan11_4153	T	TGAAAGCCCCCCTTAGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCTGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTGGGAGGTGAGAGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCATTGTGGAATAGAAAGGCGGGAAAGGTGGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCAGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTTAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6779:HG2_PB_pbsv_11105:HG3_PB_pbsv_10828:HG2_PB_assemblyticsfalcon_2519:HG2_PB_PB10Xdip_3367:HG3_Ill_MetaSV_474:HG2_PB_SVrefine2PB10Xhap12_8105:HG3_PB_assemblyticsfalcon_2504:HG2_Ill_breakscan11_4153:HG3_PB_HySA_16726:HG2_PB_HySA_20064:HG2_PB_SVrefine2Falcon1plusDovetail_1162:HG3_PB_SVrefine2PBcRDovetail_5200:HG2_PB_SVrefine2PBcRplusDovetail_1113;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_breakscan11_4153;NumExactMatchSVs=1;ClusterMaxShiftDist=0.297822;ClusterMaxSizeDiff=0.295468;ClusterMaxEditDist=0.353149;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=947;DistBack=29740;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:17522873-17522887;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9968;PctRecOverlap=0.9958;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:36:1:0:32:0|1:31:0:0:8:0/1:24:6:0/1:39:87:.:886:.
chr10	18889888	HG2_Ill_GATKHCSBGrefine_7478	T	TATATATATATGTATATATATATATATATACATATATATATATGTATATATATATATATATAC	20	PASS	ClusterIDs=HG4_Ill_scalpel_10185:HG4_Ill_GATKHC_17815:HG4_Ill_GATKHCSBGrefine_7656:HG2_Ill_GATKHC_17777:HG2_Ill_GATKHCSBGrefine_7478:HG4_PB_HySA_16200:HG4_Ill_manta_2659:HG4_PB_pbsv_11132:HG4_Ill_GATKHC_17814:HG2_PB_pbsv_11112:HG4_Ill_GATKHCSBGrefine_7655:HG4_Ill_scalpel_10186:HG2_Ill_150bpfermikitraw_13910:HG4_Ill_svaba_13898;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7478:HG2_Ill_GATKHC_17777:HG4_Ill_GATKHCSBGrefine_7656:HG4_Ill_GATKHC_17815;NumExactMatchSVs=4;ClusterMaxShiftDist=0.120301;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.201439;PBcalls=3;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=16;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=10:18889887-18889890;PctSeqSimilarity=0.9583;PctSizeSimilarity=0.9118;PctRecOverlap=0.6957;SizeDiff=-6;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=85;MatchId=527.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:36:0|1:33:4:4:23:./.:4:1:9:0:0/1:30:13:./.:.:.:.:.:.
chr10	19211096	HG2_Ill_MetaSV_501	A	ATGTTGTAGCATGTGATGGAGTTTTCTTCTTTTTTAAGTCTGCATGATATTCACACACACACACACACACACACACACACACACACACACACACACACAACGTTTTCTTTTCCCACTCATCTGTCAGTGAGTATCTAGGTTGTTTCCATGGCTTGGCTATTGTGAATAATGTTGCAAAGAACATGGTTGTACAAATACTTTGAGATCTTGCTTAGAAATCTTTTGGATGTATACCCAGAAGTGAGATATCTGGATTATGTACTAATTATAGTTTTAAATTTTTGAAGAACCTTCATACTGTTTTCCATAATAGCTGTACCATTTTACATTACAACCCAAAGTGAGGAAGGGTTTCAACTTCTCTGCTTTCTCACTAATGCTTAATATTTTTTGTTCTTTTGATAGTGGCCATCCTGATGAGTGTAAGGTTTTGATTTGCATTTCCTTAATGATTAGTGATGTTGAACATCTTTTTATATGCTTATTAGCCATTTGTATATAGTATTTGGAGAAGTGTCTAAAGCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8110:HG4_PB_HySA_16203:HG2_PB_pbsv_11114:HG3_Ill_GATKHCSBGrefine_7387:HG4_Ill_GATKHCSBGrefine_7659:HG4_PB_SVrefine2PBcRDovetail_5594:HG2_10X_SVrefine210Xhap12_7810:HG2_PB_assemblyticsPBcR_2478:HG2_PB_SVrefine2PBcRplusDovetail_1116:HG2_PB_assemblyticsfalcon_2527:HG2_PB_SVrefine2Falcon1plusDovetail_1164:HG4_PB_SVrefine2Falcon1Dovetail_6783:HG4_Ill_SVrefine2DISCOVARDovetail_7940:HG3_PB_assemblyticsfalcon_2518:HG3_PB_SVrefine2Falcon1Dovetail_6728:HG4_Ill_MetaSV_513:HG3_Ill_MetaSV_476:HG2_Ill_MetaSV_501:HG3_PB_pbsv_10839:HG4_PB_pbsv_11134:HG2_PB_PB10Xdip_3436;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_MetaSV_501:HG3_Ill_MetaSV_476:HG4_Ill_MetaSV_513;NumExactMatchSVs=3;ClusterMaxShiftDist=0.17561;ClusterMaxSizeDiff=0.169756;ClusterMaxEditDist=0.222004;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=525;DistBack=-1;DistForward=5554;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=10:19211097-19211096;PctSeqSimilarity=0.9943;PctSizeSimilarity=0.9886;PctRecOverlap=0.9886;SizeDiff=6;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:38:0|1:29:1:1:32:1|0:0:18:32:0:0/1:34:13:0/1:6:54:.:.:.
chr10	19216651	HG2_Ill_MetaSV_502	T	TAAGAAGTGAGACATATGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATGGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGAACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3437:HG2_PB_pbsv_11115:HG3_PB_pbsv_10840:HG2_PB_HySA_20076:HG2_PB_assemblyticsfalcon_2528:HG2_PB_SVrefine2Falcon1plusDovetail_1165:HG3_PB_assemblyticsfalcon_2519:HG2_Ill_breakscan11_4154:HG3_PB_HySA_16736:HG2_PB_SVrefine2PB10Xhap12_8111:HG3_PB_SVrefine2Falcon1Dovetail_6729:HG2_PB_SVrefine2Falcon2Bionano_5329:HG2_Ill_MetaSV_502:HG2_PB_HySA_20075;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_502:HG2_PB_SVrefine2Falcon2Bionano_5329;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0734049;ClusterMaxSizeDiff=0.0734049;ClusterMaxEditDist=0.148597;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=874;DistBack=5554;DistForward=29;DistMin=29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:19216652-19216666;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=529.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:38:1|0:1:29:36:6:0|1:21:0:0:8:0/1:31:7:0/1:27:124:.:.:.
chr10	19819311	HG3_Ill_250bpfermikitraw_14416	T	TATAATATTTATATAAATATTTATATAAATATATAAATTTATATAAATATTTATATAAATA	20	PASS	ClusterIDs=HG2_PB_HySA_20086:HG3_PB_HySA_16746:HG4_Ill_250bpfermikitraw_14700:HG3_Ill_Krunchall_14835:HG3_Ill_250bpfermikitraw_14416:HG2_Ill_250bpfermikitraw_14813;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14813:HG3_Ill_250bpfermikitraw_14416:HG3_Ill_Krunchall_14835:HG4_Ill_250bpfermikitraw_14700;NumExactMatchSVs=4;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.2;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=10:19819310-19819312;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:27:./.:19:8:12:8:./.:2:6:0:8:0/1:11:37:./.:.:.:.:.:.
chr10	20007037	HG4_Ill_GATKHCSBGrefine_7666	G	GAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAGGAAGAAGAGGAAGAGGAAAAGAGGAAGAGGAAGAAAGGAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7815:HG4_Ill_Krunchall_15397:HG2_PB_pbsv_11122:HG2_PB_HySA_20088:HG4_PB_HySA_16213:HG4_Ill_GATKHC_17826:HG4_Ill_GATKHCSBGrefine_7666:HG2_Ill_Krunchall_15124:HG2_Ill_GATKHC_17790:HG2_Ill_GATKHCSBGrefine_7486:HG4_Ill_SVrefine2DISCOVARDovetail_7945;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7486:HG2_Ill_GATKHC_17790:HG2_Ill_Krunchall_15124:HG4_Ill_GATKHCSBGrefine_7666:HG4_Ill_GATKHC_17826:HG4_Ill_Krunchall_15397;NumExactMatchSVs=6;ClusterMaxShiftDist=0.172185;ClusterMaxSizeDiff=0.172185;ClusterMaxEditDist=0.291391;PBcalls=3;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=76;DistBack=9028;DistForward=4481;DistMin=4481;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=193;REFWIDENED=10:20006960-20007152;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=531.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:18:./.:16:11:23:4:./.:6:26:11:0:0/1:18:10:./.:.:.:.:.:.
chr10	21192817	HG3_Ill_GATKHCSBGrefine_7400	T	TAAAATCTACGGATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_20103:HG2_PB_pbsv_11134:HG3_PB_pbsv_10857:HG3_PB_assemblyticsfalcon_2545:HG2_PB_assemblyticsfalcon_2550:HG2_Ill_MetaSV_507:HG3_PB_SVrefine2Falcon1Dovetail_6741:HG3_Ill_MetaSV_481:HG3_Ill_GATKHCSBGrefine_7400:HG2_PB_SVrefine2Falcon2Bionano_5339:HG2_Ill_GATKHCSBGrefine_7494:HG2_PB_SVrefine2Falcon1plusDovetail_1178:HG2_Ill_breakscan11_4155;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7494:HG2_PB_SVrefine2Falcon2Bionano_5339:HG3_Ill_GATKHCSBGrefine_7400:HG3_Ill_MetaSV_481;NumExactMatchSVs=4;ClusterMaxShiftDist=0.15748;ClusterMaxSizeDiff=0.15748;ClusterMaxEditDist=0.183835;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=320;DistBack=21723;DistForward=20524;DistMin=20524;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=10:21192818-21192833;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=533.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:1|0:3:19:19:4:0|1:26:0:0:9:0/1:21:10:0/1:6:31:.:.:.
chr10	21346518	HG4_Ill_scalpel_10208	G	GCCCAGGCTGGAGTGCAGTAGCGTGAACTTGGCTCACTGCAACCTCTGTCA	20	PASS	ClusterIDs=HG2_Ill_svaba_13827:HG2_PB_PB10Xdip_3468:HG2_PB_pbsv_11135:HG4_Ill_svaba_13921:HG4_PB_pbsv_11152:HG4_Ill_scalpel_10208:HG3_PB_pbsv_10858:HG4_Ill_GATKHC_17844:HG4_Ill_GATKHCSBGrefine_7674:HG3_Ill_svaba_13983:HG3_Ill_scalpel_10630:HG3_Ill_Spiral_11579:HG3_Ill_GATKHC_17721:HG3_Ill_GATKHCSBGrefine_7401:HG2_PB_assemblyticsfalcon_2552:HG2_PB_assemblyticsPBcR_2498:HG2_Ill_svaba_13828:HG2_Ill_scalpel_10479:HG2_Ill_GATKHC_17801:HG2_Ill_GATKHCSBGrefine_7495:HG2_Ill_FB_9569:HG4_PB_HySA_16227:HG2_PB_HySA_20104:HG4_Ill_svaba_13920:HG3_Ill_svaba_13982;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_FB_9569:HG2_Ill_GATKHCSBGrefine_7495:HG2_Ill_GATKHC_17801:HG2_Ill_scalpel_10479:HG2_Ill_svaba_13828:HG2_PB_assemblyticsPBcR_2498:HG2_PB_assemblyticsfalcon_2552:HG3_Ill_GATKHCSBGrefine_7401:HG3_Ill_GATKHC_17721:HG3_Ill_Spiral_11579:HG3_Ill_scalpel_10630:HG3_Ill_svaba_13983:HG4_Ill_GATKHCSBGrefine_7674:HG4_Ill_GATKHC_17844:HG4_Ill_scalpel_10208:HG4_Ill_svaba_13921;NumExactMatchSVs=16;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.350877;PBcalls=8;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=13191;DistForward=35;DistMin=35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=70;REFWIDENED=10:21346511-21346580;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=534.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:31:0|1:24:0:1:32:0|1:8:0:1:15:0/1:12:10:./.:.:.:.:.:.
chr10	21350224	HG2_Ill_250bpfermikitraw_14827	A	ATTACATATTATGTGATATGTAACATATTACATATTATGTGATATGTAACATATTACATATTATGTGATATGTAACATATTACATATTATGTGATATGTAACATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1179:HG3_PB_HySA_16760:HG3_PB_pbsv_10859:HG3_Ill_250bpfermikitraw_14431:HG2_PB_HySA_20105:HG2_Ill_250bpfermikitraw_14827:HG2_PB_pbsv_11136;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14827:HG3_Ill_250bpfermikitraw_14431;NumExactMatchSVs=2;ClusterMaxShiftDist=0.119266;ClusterMaxSizeDiff=0.110092;ClusterMaxEditDist=0.220183;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=104;DistBack=4;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=118;REFWIDENED=10:21350170-21350287;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:23:./.:26:6:7:16:./.:18:1:11:23:0/1:25:23:./.:.:.:.:.:.
chr10	23775696	HG3_PB_pbsv_10869	A	ATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCCTCTGTCGCCCAGCCAGACTGCGGACTGCAGTGGCGGCAATCTCGGCTCACTGCAAGACCTCCGCTCCCGCGGTTCACGCCATTCTCCTTGCCTGCAGCCTTCCCGAGTAGCTGGTGACGTACAGGCGCCCGCCACCGCCCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGGATGGTAACTCGGAATCTCCTGACCTCATCATCACCCTCCTCGGCCTCCCAAAGTCTGGATTACAGGGCGTGAGCCAACCGCGCCCGGCCAACGTGTGATTATTTATT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4158:HG3_PB_pbsv_10869:HG2_PB_pbsv_11143:HG4_PB_pbsv_11159:HG2_PB_assemblyticsfalcon_2567:HG4_PB_assemblyticsfalcon_2514:HG3_PB_assemblyticsfalcon_2558:HG2_PB_SVrefine2Falcon2Bionano_5344:HG4_PB_SVrefine2PBcRDovetail_5608:HG4_PB_SVrefine2Falcon1Dovetail_6801:HG3_PB_SVrefine2Falcon1Dovetail_6746:HG4_PB_HySA_16241;NumClusterSVs=12;ExactMatchIDs=HG3_PB_pbsv_10869;NumExactMatchSVs=1;ClusterMaxShiftDist=0.164425;ClusterMaxSizeDiff=0.164425;ClusterMaxEditDist=0.197309;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=345;DistBack=8;DistForward=4823;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=10:23775697-23775696;PctSeqSimilarity=0.9515;PctSizeSimilarity=0.9768;PctRecOverlap=0.9333;SizeDiff=8;StartDistance=19;EndDistance=19;GTMatch=0;TruScore=95;MatchId=536.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:23:0|1:29:0:0:24:./.:7:13:20:0:./.:27:2:0/1:8:9:.:.:.
chr10	23797034	HG4_Ill_SVrefine2DISCOVARDovetail_7964	T	TTCATGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTCTTTGTATCCTCTTTTATTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTTACGTCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTACTGGTGTATAAGAATGCTTGTGATTTTTGCAGATTGATTTTGTATCCTGATACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGACTAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGACTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAGATACGTCCCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3556:HG2_PB_SVrefine2PBcRplusDovetail_1130:HG4_PB_assemblyticsfalcon_2516:HG2_PB_assemblyticsfalcon_2568:HG4_PB_pbsv_11160:HG3_PB_assemblyticsfalcon_2559:HG3_PB_SVrefine2Falcon1Dovetail_6747:HG2_PB_SVrefine2PB10Xhap12_8131:HG4_PB_SVrefine2PBcRDovetail_5609:HG4_Ill_SVrefine2DISCOVARDovetail_7964:HG2_PB_SVrefine2Falcon1plusDovetail_1182:HG2_10X_SVrefine210Xhap12_7829:HG2_PB_pbsv_11144:HG3_PB_pbsv_10870;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7829:HG2_PB_SVrefine2Falcon1plusDovetail_1182:HG4_Ill_SVrefine2DISCOVARDovetail_7964:HG4_PB_SVrefine2PBcRDovetail_5609;NumExactMatchSVs=4;ClusterMaxShiftDist=0.12628;ClusterMaxSizeDiff=0.12628;ClusterMaxEditDist=0.173985;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=572;DistBack=16487;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=10:23797035-23797037;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=537.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:17:0|1:25:0:0:17:./.:0:0:35:0:0/1:18:3:0/1:10:73:.:.:.
chr10	23842041	HG2_PB_SVrefine2Falcon1plusDovetail_1183	C	CAATACAGAAAAATTCTTTTTTATATGATCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACGTTTTCTTAATCCAGTCTATCATTGCTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCTGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGTTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTACAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATAAGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTTAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3557:HG3_PB_pbsv_10871:HG2_PB_pbsv_11145:HG4_PB_pbsv_11161:HG4_PB_assemblyticsfalcon_2517:HG4_PB_SVrefine2Falcon1Dovetail_6802:HG4_PB_SVrefine2PBcRDovetail_5610:HG3_PB_SVrefine2PBcRDovetail_5218:HG2_PB_SVrefine2Falcon2Bionano_5345:HG2_PB_SVrefine2PBcRplusDovetail_1132:HG2_PB_SVrefine2Falcon1plusDovetail_1183:HG3_PB_SVrefine2Falcon1Dovetail_6748:HG2_PB_SVrefine2PB10Xhap12_8132:HG3_PB_HySA_16779:HG4_PB_HySA_16242:HG2_PB_HySA_20128:HG2_Ill_breakscan11_4159;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1183;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0586895;ClusterMaxSizeDiff=0.0586895;ClusterMaxEditDist=0.171661;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=3431;DistBack=10395;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=10:23842042-23842058;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.998;PctRecOverlap=0.9977;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=538.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:66:0|1:41:1:0:43:1|0:0:14:31:0:0/1:29:21:0/1:108:456:.:3358:.
chr10	25707686	HG3_PB_SVrefine2PBcRDovetail_5224	T	TGAAAATAATCTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCCAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCGCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCCACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTTCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTAGCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCAGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTCTAAGTTGGATTCCTTGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAGACAGGGACAATTTGACTTCCTCTTTTCCTAACTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCTGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTATAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATATCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTGTGTGTCGAGGAATTTATCCGTTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCTGTCTATCAAATTGTTGATCCTTTCAAAAAACCAGCTCCTGCATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATTTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGCGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTCCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATTTTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGTTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACTGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGGGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTGTTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCAAGGGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTGTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCGCATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATTTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCAGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGTTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCGCTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGCGATTCCCTGGGCGTAGGACCCTGTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCAGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGTCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCGCACACACTGGCCTGTGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCATCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCTCCCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5224:HG3_PB_pbsv_10880:HG4_PB_assemblyticsfalcon_2527:HG3_PB_assemblyticsfalcon_2576;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_5224;NumExactMatchSVs=1;ClusterMaxShiftDist=0.077502;ClusterMaxSizeDiff=0.077502;ClusterMaxEditDist=0.147958;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=0;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=6054;DistBack=6823;DistForward=8048;DistMin=6823;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=10:25707687-25707704;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=0.9997;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=540.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:30:0|1:30:0:0:38:./.:34:0:0:2:0/1:31:10:0/1:229:666:.:5934:.
chr10	26045393	HG3_Ill_MetaSV_485	G	GTCTGGTGGGGACGTGGAGGACCTTTATGTCTAGCTCAGGGATTGTAAATACACCAATGGGCACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAGGGTTTGTGAATGCACCAATTGACACTCTGTATCTAGCTACTCTGGTGGGGCCTTGGAGAACCTTTGTGTCCACACTCTGTATCTAGCTAA	20	PASS	ClusterIDs=HG4_PB_HySA_16264:HG4_PB_pbsv_11172:HG2_PB_SVrefine2PB10Xhap12_8145:HG2_PB_pbsv_11155:HG4_PB_SVrefine2PBcRDovetail_5619:HG4_Ill_SVrefine2DISCOVARDovetail_7977:HG4_Ill_MetaSV_522:HG4_Ill_GATKHCSBGrefine_7696:HG3_PB_SVrefine2PBcRDovetail_5226:HG3_Ill_manta_2559:HG3_Ill_SVrefine2DISCOVARDovetail_8186:HG3_Ill_MetaSV_485:HG3_Ill_GATKHCSBGrefine_7416:HG2_PB_SVrefine2PBcRplusDovetail_1140:HG2_PB_SVrefine2PB10Xhap12_8144:HG2_PB_SVrefine2Falcon2Bionano_5354:HG2_PB_SVrefine2Falcon1plusDovetail_1191:HG2_Ill_manta_3141:HG2_Ill_SVrefine2DISCOVARplusDovetail_1316:HG2_Ill_MetaSV_511:HG2_Ill_GATKHCSBGrefine_7514:HG2_10X_SVrefine210Xhap12_7843:HG3_PB_pbsv_10883:HG2_PB_HySA_20164:HG2_PB_PB10Xdip_3569:HG2_PB_PB10Xdip_3568;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7843:HG2_Ill_GATKHCSBGrefine_7514:HG2_Ill_MetaSV_511:HG2_Ill_SVrefine2DISCOVARplusDovetail_1316:HG2_Ill_manta_3141:HG2_PB_SVrefine2Falcon1plusDovetail_1191:HG2_PB_SVrefine2Falcon2Bionano_5354:HG2_PB_SVrefine2PB10Xhap12_8144:HG2_PB_SVrefine2PBcRplusDovetail_1140:HG3_Ill_GATKHCSBGrefine_7416:HG3_Ill_MetaSV_485:HG3_Ill_SVrefine2DISCOVARDovetail_8186:HG3_Ill_manta_2559:HG3_PB_SVrefine2PBcRDovetail_5226:HG4_Ill_GATKHCSBGrefine_7696:HG4_Ill_MetaSV_522:HG4_Ill_SVrefine2DISCOVARDovetail_7977:HG4_PB_SVrefine2PBcRDovetail_5619;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0651163;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.242009;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=210;DistBack=2966;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=57;REFWIDENED=10:26045394-26045450;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:1:31:2:24:./.:0:5:0:5:1/1:0:48:./.:.:.:.:.:.
chr10	26852965	HG3_Ill_MetaSV_490	T	TAAAAAGAAAAAATATGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1194:HG3_PB_pbsv_10891:HG2_PB_pbsv_11163:HG4_PB_pbsv_11176:HG4_PB_HySA_16265:HG4_Ill_MetaSV_526:HG4_Ill_GATKHCSBGrefine_7700:HG3_Ill_MetaSV_490:HG2_Ill_MetaSV_516:HG2_Ill_GATKHCSBGrefine_7521:HG4_PB_assemblyticsfalcon_2535:HG3_PB_assemblyticsfalcon_2587;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7521:HG2_Ill_MetaSV_516:HG3_Ill_MetaSV_490:HG4_Ill_GATKHCSBGrefine_7700:HG4_Ill_MetaSV_526;NumExactMatchSVs=5;ClusterMaxShiftDist=0.144201;ClusterMaxSizeDiff=0.144201;ClusterMaxEditDist=0.200627;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=-10;DistForward=7454;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=10:26852962-26852979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:./.:10:16:15:8:0|1:31:0:0:5:0/1:28:11:0/1:4:23:.:.:.
chr10	26961088	HG3_PB_SVrefine2Falcon1Dovetail_6755	ATTG	TTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTT	20	PASS	ClusterIDs=HG4_PB_pbsv_11177:HG3_PB_HySA_16817:HG3_PB_assemblyticsfalcon_2589:HG3_PB_SVrefine2Falcon1Dovetail_6755:HG2_PB_SVrefine2Falcon2Bionano_5358:HG3_PB_pbsv_10892:HG3_Ill_MetaSV_491:HG2_PB_pbsv_11164:HG2_Ill_MetaSV_517;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5358:HG3_PB_SVrefine2Falcon1Dovetail_6755:HG3_PB_assemblyticsfalcon_2589;NumExactMatchSVs=3;ClusterMaxShiftDist=0.064;ClusterMaxSizeDiff=0.0426667;ClusterMaxEditDist=0.244032;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=181;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=166;REFWIDENED=10:26960922-26961087;PctSeqSimilarity=0.9948;PctSizeSimilarity=0.9891;PctRecOverlap=0.9565;SizeDiff=-2;StartDistance=6;EndDistance=9;GTMatch=0;TruScore=98;MatchId=543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:31:3:2:28:./.:1:12:23:0:0/1:28:16:./.:.:.:.:.:.
chr10	27696251	HG3_Ill_GATKHCSBGrefine_7430	A	AAAAAAAAAAAAACAAGCAGAAACTGTCAGAACCAATTTTATGTCCTCTCAAAGAATTATC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7858:HG3_PB_pbsv_10898:HG4_Ill_GATKHC_17911:HG4_Ill_GATKHCSBGrefine_7709:HG4_Ill_150bpfermikitraw_14145:HG3_Ill_GATKHC_17789:HG3_Ill_GATKHCSBGrefine_7430:HG3_Ill_150bpfermikitraw_14014:HG3_Ill_svaba_14047:HG3_Ill_150bpfermikitraw_14013:HG2_PB_PB10Xdip_3656:HG4_PB_assemblyticsfalcon_2548:HG2_PB_PB10Xdip_3655:HG2_Ill_150bpfermikitraw_13989:HG4_PB_pbsv_11186:HG4_Ill_GATKHC_17910:HG4_Ill_GATKHCSBGrefine_7708:HG3_PB_SVrefine2PBcRDovetail_5235:HG2_PB_SVrefine2Falcon1plusDovetail_1199:HG2_Ill_SVrefine2DISCOVARplusDovetail_1325:HG4_Ill_SVrefine2DISCOVARDovetail_7988:HG2_Ill_150bpfermikitraw_13988;NumClusterSVs=22;ExactMatchIDs=HG3_Ill_150bpfermikitraw_14014:HG3_Ill_GATKHCSBGrefine_7430:HG3_Ill_GATKHC_17789:HG4_Ill_150bpfermikitraw_14145:HG4_Ill_GATKHCSBGrefine_7709:HG4_Ill_GATKHC_17911;NumExactMatchSVs=6;ClusterMaxShiftDist=0.110236;ClusterMaxSizeDiff=0.110236;ClusterMaxEditDist=0.188976;PBcalls=7;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=60;DistBack=22;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=65;REFWIDENED=10:27696229-27696293;PctSeqSimilarity=0.9767;PctSizeSimilarity=0.9375;PctRecOverlap=0.6154;SizeDiff=-4;StartDistance=23;EndDistance=23;GTMatch=0;TruScore=84;MatchId=544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:31:0:26:./.:1:17:4:19:0/1:1:8:./.:.:.:.:.:.
chr10	27929918	HG2_Ill_GATKHCSBGrefine_7528	T	TCAAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCGTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGC	20	PASS	ClusterIDs=HG3_PB_HySA_16832:HG4_PB_pbsv_11190:HG3_PB_SVrefine2PBcRDovetail_5237:HG3_PB_assemblyticsfalcon_2609:HG2_PB_SVrefine2PB10Xhap12_8160:HG2_PB_PB10Xdip_3658:HG2_PB_PB10Xdip_3659:HG3_PB_HySA_16833:HG3_PB_pbsv_10901:HG2_PB_pbsv_11178:HG2_Ill_SVrefine2DISCOVARplusDovetail_1328:HG2_Ill_GATKHCSBGrefine_7528:HG2_PB_SVrefine2Falcon2Bionano_5364:HG2_PB_SVrefine2PB10Xhap12_8159:HG2_PB_HySA_20187;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7528:HG2_Ill_SVrefine2DISCOVARplusDovetail_1328;NumExactMatchSVs=2;ClusterMaxShiftDist=0.163724;ClusterMaxSizeDiff=0.163724;ClusterMaxEditDist=0.207237;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=24027;DistForward=45399;DistMin=24027;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=10:27929919-27929928;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=545.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:39:0|1:29:0:0:50:./.:1:6:16:0:0/1:22:11:0/1:17:37:.:.:.
chr10	28332917	HG2_PB_PB10Xdip_3660	T	AAGTGTATAATTGATCAGTTTACAAGAAATAATAACAATTAAAATAATAAACATATTCATTATTCCCAGATGTTTTCTTGTACCCCTTGGTAATCCCTCTTTTTCTTCCCATCCCCTCCCACATATCCTGGCAATCACTAATCTACGTTTTGTTATTTTAGGTTGCTTTAAATTTTCCAAAATTTTCTATAAATGGAACCGTACAGTATGTGCTCTCTCGCTCTCTCTCTCTCTTTTTGTCTGGCTGTTTCCTTCAGCATAATGATTTTGAGATTCATCCTTATTGATTGCATGTTTCATTAGTGTACTCCTGTGTATTGTGGAGTGCCATTCCATTGTATGTATAGGCCATGATTTGTTTACTCTTTAGCCTGTTGATAGATATTTAGTTTGTTTCCAGTTTGAGGCAATTACAAATAATGCTGGTACGGACATTTGTGTACAAGTCTTTATGTGAATGTGTCCTTCCGTTTCTCTTTGGCAAATGTCTAGGAATTAAATAGTTGCATTACATAGTAGTGTATTTAATTTCAGAAACTGCAAAATTGTTTTCCAAAGTGGCTGCATCATCCCTACAGTGTACCTTCCCAAAGTGCACCTTCCCTACAGCACTTGCCATGATCAGTGTTTTTAATTGTAATCAACCTGACAGGTGAATAATGGTGTCTCATTGTGATTTCAATTTGCATTTCCCTGTTGACTAATGAGGTTGAGCATCTTTCTAGAAATGCTTATTGGACAGTTATATATATATATTCAAATCATTTGCCCATTTGTTTATTGAGCTGTAAGACACTGAAGAAATTTAAGCAAGAGAGTATCATAATCAAATTTATGAAAAATCACTCAAGCAGGAAATATTGAAGATAAATGACACCAGGGCAAAACTGCAGAAGAGGAGCCAGTTAGAGTATATTGGAATAAGTCCAGCAAGAGATGATGAGTTAGTGGCAGTGAGTGAAGAAGAGACATCTCTGGTACAAAACTGACAAGTACCGGTGGCCATTTTTCCATGTGAGAGTTAATCAACAGAAAGAAAATCTAGAGGCTGGCTATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAAGCCAAGGCAGGGAGATTGCCTGAGGCCAGAAGTTTAAGAAAAGCCTGGGCAACATAGTGAGACCCTGACTCTACTATGTCTGTCATCTATCTATCTATCTATCTATCTATCTATCTATCTCTCTCTCTCTCTCTATATATATATATACAGTGTATATATATATACTATATATATATACACTGTATATATATATACAGTGTATATATATAGTATATATATATACATA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3660:HG2_PB_pbsv_11180:HG4_PB_SVrefine2PBcRDovetail_5629:HG2_Ill_SVrefine2DISCOVARplusDovetail_1332:HG2_PB_SVrefine2Falcon1plusDovetail_1201:HG2_PB_SVrefine2PBcRplusDovetail_1150:HG2_PB_SVrefine2PB10Xhap12_8161;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_3660:HG2_PB_SVrefine2PB10Xhap12_8161;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0467186;ClusterMaxSizeDiff=0.0467186;ClusterMaxEditDist=0.0860215;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=1316;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:28332918-28332916;PctSeqSimilarity=0.991;PctSizeSimilarity=0.9821;PctRecOverlap=0.9821;SizeDiff=-24;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=547.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:22:./.:11:14:13:5:./.:21:0:1:13:0/1:34:22:0/1:37:104:.:1356:.
chr10	28938617	HG2_Ill_SVrefine2DISCOVARplusDovetail_1335	T	TGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTAGGTGGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACAGTGAAACCCCATCTGTACTAAAAATACAAAAAAAATTAGCCAGGCATGGTGGCGGGTGCCTGTAGTCCCAGCTATGTGGGAGGCTGAGGCAGGAGAATGGCCTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGGCTGGGTGACAGAGCGAGACTCCATCTCAAAAAAAAAAGAAAAAAAGAAAGAAATGCCACTGATTTTTGTATAAAAATTTTGTATCCTGCAATTTTACTGAATTTATCAATTCAAATGGCTTTTTTGGTAGAGTATTTAGGTTTTTCTACATATAAGAACATGTCATCTGCAAAAAGGGACAGTGTTACTTCCTACTTTCCTATATGGATGCCCTTTGTTCCTTTCTCTTGCTTAGTTGCTATGGCTAGAACTTCTATTAATAATACTGTATTGAATAAGAGTGATGAGAGTGGGTATACTTGTCTTGTTCCAGTTTTTAGAGGAAAAGCTTTCAGTTTTTCCCCATTCAGTAAAATATTAGCTGTGGAACAATTTTAATTATAATTAAATGTCCCTCTTCATCTCTGGAAATATGTTTTTCTTGAAGTCCATTTTATCTGGCCTTAATACAGCCACTCAAACCCTGTTATGCTTACTGTTTGCATGGTACATCTTTTTCCACTTGCTTTTAGCCTATCTGTGTGTTTCTATACTTAAACTGCATTTCTTCTAGAAAAAAATAGAGTAG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1335:HG2_PB_HySA_20192:HG2_PB_pbsv_11181:HG3_PB_HySA_16844:HG2_PB_HySA_20191:HG4_Ill_GATKHCSBGrefine_7713:HG2_PB_PB10Xdip_3661:HG3_Ill_GATKHCSBGrefine_7434:HG2_Ill_GATKHCSBGrefine_7530:HG2_Ill_Spiral_781:HG4_Ill_Spiral_913:HG3_Ill_MetaSV_494:HG2_Ill_MetaSV_523:HG2_PB_SVrefine2Falcon2Bionano_5365:HG2_PB_SVrefine2PBcRplusDovetail_1151:HG2_PB_SVrefine2PB10Xhap12_8162;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1335:HG2_PB_SVrefine2PBcRplusDovetail_1151:HG2_PB_SVrefine2PB10Xhap12_8162;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0604595;ClusterMaxSizeDiff=0.0580411;ClusterMaxEditDist=0.122128;PBcalls=8;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=823;DistBack=23617;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=306;REFWIDENED=10:28938618-28938923;PctSeqSimilarity=0.9976;PctSizeSimilarity=1;PctRecOverlap=0.9878;SizeDiff=0;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=99;MatchId=548.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:22:38:0|1:17:3:1:35:1|0:0:7:29:0:0/1:24:4:0/1:17:84:.:.:.
chr10	29102527	HG2_Ill_MetaSV_524	T	TCTAAATCATCTATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCTTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4162:HG2_PB_pbsv_11182:HG4_PB_HySA_16284:HG4_PB_pbsv_11196:HG2_PB_HySA_20194:HG3_PB_assemblyticsfalcon_2621:HG4_PB_assemblyticsfalcon_2559:HG3_PB_HySA_16847:HG2_PB_SVrefine2Falcon2Bionano_5366:HG4_PB_SVrefine2PBcRDovetail_5631:HG4_Ill_MetaSV_531:HG3_PB_SVrefine2PBcRDovetail_5240:HG3_Ill_MetaSV_495:HG2_PB_SVrefine2PBcRplusDovetail_1152:HG2_PB_SVrefine2PB10Xhap12_8163:HG2_Ill_MetaSV_524:HG2_10X_SVrefine210Xhap12_7863:HG3_Ill_GATKHCSBGrefine_7435:HG4_Ill_GATKHCSBGrefine_7714:HG2_Ill_GATKHCSBGrefine_7531:HG2_Ill_manta_3149:HG2_PB_PB10Xdip_3663:HG2_PB_PB10Xdip_3662:HG2_PB_SVrefine2Falcon1plusDovetail_1203:HG3_PB_pbsv_10906;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7863:HG2_Ill_MetaSV_524:HG2_PB_SVrefine2PB10Xhap12_8163:HG2_PB_SVrefine2PBcRplusDovetail_1152:HG3_Ill_MetaSV_495:HG3_PB_SVrefine2PBcRDovetail_5240:HG4_Ill_MetaSV_531:HG4_PB_SVrefine2PBcRDovetail_5631;NumExactMatchSVs=8;ClusterMaxShiftDist=0.133758;ClusterMaxSizeDiff=0.133758;ClusterMaxEditDist=0.280488;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=315;DistBack=16259;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=10:29102528-29102541;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=549.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:55:1/1:0:7:0:11:1/1:0:8:0:13:1/1:0:20:1/1:2:53:.:.:.
chr10	29105284	HG3_Ill_MetaSV_496	T	TAAAAGTAAAAATACGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3664:HG2_PB_pbsv_11183:HG2_Ill_MetaSV_525:HG3_PB_pbsv_10907:HG2_PB_HySA_20196:HG4_PB_pbsv_11197:HG3_PB_assemblyticsfalcon_2622:HG4_PB_assemblyticsfalcon_2560:HG3_PB_HySA_16848:HG2_PB_HySA_20195:HG2_Ill_breakscan11_4163:HG4_PB_SVrefine2PBcRDovetail_5632:HG4_Ill_GATKHCSBGrefine_7715:HG3_Ill_MetaSV_496:HG3_Ill_GATKHCSBGrefine_7436:HG2_PB_SVrefine2PBcRplusDovetail_1153:HG2_PB_SVrefine2PB10Xhap12_8164:HG2_PB_SVrefine2Falcon2Bionano_5367:HG2_PB_SVrefine2Falcon1plusDovetail_1204:HG3_PB_SVrefine2PBcRDovetail_5241:HG2_10X_SVrefine210Xhap12_7864:HG4_PB_HySA_16285:HG4_Ill_MetaSV_532:HG2_PB_PB10Xdip_3665;NumClusterSVs=24;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1204:HG2_PB_SVrefine2Falcon2Bionano_5367:HG2_PB_SVrefine2PB10Xhap12_8164:HG2_PB_SVrefine2PBcRplusDovetail_1153:HG3_Ill_GATKHCSBGrefine_7436:HG3_Ill_MetaSV_496:HG4_Ill_GATKHCSBGrefine_7715;NumExactMatchSVs=7;ClusterMaxShiftDist=0.133758;ClusterMaxSizeDiff=0.133758;ClusterMaxEditDist=0.235474;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=315;DistBack=1363;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=10:29105285-29105298;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=550.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:9:0:5:./.:0:4:0:12:1/1:0:20:1/1:2:60:.:.:.
chr10	29146319	HG2_PB_pbsv_11184	T	TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAAGTCTGCTCCTGTCGCCCAGGCTGGAGTGCAGCTGCGGGATCTCGCTCACGGCAAGCTCCCGCCTCCCGGCGTTCACGCCATTCTCCGCCTCAGCCTCCCAAGTAGCTGGACTACAGGCGCCCGCCACTACGGCCCGCGCTAATTTGTGGCATTTTTTAGTAGAGACGGAGGTTTCACCGTTTGCCGTGCTGGTCTCGAATCTCCATGACCTTCGTTGAATCCGCCCGCCCTCGCCTTCCCTCTTCCTCTC	20	PASS	ClusterIDs=HG3_PB_HySA_16849:HG2_PB_pbsv_11184:HG3_PB_pbsv_10908:HG2_Ill_MetaSV_526:HG3_Ill_MetaSV_497:HG2_PB_SVrefine2Falcon1plusDovetail_1205:HG3_PB_SVrefine2PBcRDovetail_5242:HG2_PB_HySA_20197;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_11184;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0385965;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.235501;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=284;DistBack=9;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=10:29146320-29146319;PctSeqSimilarity=0.9399;PctSizeSimilarity=0.9894;PctRecOverlap=0.9368;SizeDiff=3;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=95;MatchId=551.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:33:0|1:28:3:0:40:./.:6:3:39:0:0/1:24:4:./.:.:.:.:.:.
chr10	29147339	HG3_Ill_GATKHCSBGrefine_7437	T	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG2_PB_HySA_20198:HG3_Ill_GATKHC_17811:HG3_Ill_GATKHCSBGrefine_7437:HG2_Ill_GATKHC_17891:HG2_Ill_GATKHCSBGrefine_7532:HG3_Ill_Spiral_11648:HG2_PB_HySA_20199:HG3_PB_HySA_16850;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7532:HG2_Ill_GATKHC_17891:HG3_Ill_GATKHCSBGrefine_7437:HG3_Ill_GATKHC_17811;NumExactMatchSVs=4;ClusterMaxShiftDist=0.191304;ClusterMaxSizeDiff=0.191304;ClusterMaxEditDist=0.191304;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=25;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=10:29147338-29147342;PctSeqSimilarity=0.9557;PctSizeSimilarity=0.8947;PctRecOverlap=0.5263;SizeDiff=-6;StartDistance=24;EndDistance=24;GTMatch=0;TruScore=79;MatchId=551.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:19:0|1:28:3:1:20:1|0:1:12:26:1:0/1:18:16:./.:.:.:.:.:.
chr10	29177725	HG3_Ill_150bpfermikitraw_14033	T	TTATATAATTAAATATATAATTAATTATATATTTATATATAATTAATTATATAATTAATTATATATTTATATATAATTAATTATATAATTAAATATATAATTAATTATATATTTATATATAATTAAATATATAATTAATTATATATTTATATATAATTAAATATATAATTAATTATATAGTTA	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_8204:HG2_PB_SVrefine2Falcon1plusDovetail_1206:HG2_PB_pbsv_11186:HG3_Ill_GATKHCSBGrefine_7438:HG3_Ill_250bpfermikitraw_14501:HG3_Ill_150bpfermikitraw_14033:HG2_Ill_GATKHCSBGrefine_7533:HG3_PB_pbsv_10910:HG3_PB_SVrefine2PBcRDovetail_5243;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7533:HG3_Ill_150bpfermikitraw_14033:HG3_Ill_250bpfermikitraw_14501:HG3_Ill_GATKHCSBGrefine_7438;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0842697;ClusterMaxSizeDiff=0.0786517;ClusterMaxEditDist=0.214689;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=182;DistBack=35;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=181;REFWIDENED=10:29177624-29177804;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:18:./.:15:20:14:8:./.:0:9:0:0:0/1:16:18:./.:.:.:.:.:.
chr10	30018600	HG2_Ill_MetaSV_528	T	TAAAAACACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_11193:HG3_PB_HySA_16863:HG3_PB_pbsv_10918:HG2_PB_HySA_20213:HG3_Ill_GATKHCSBGrefine_7443:HG2_Ill_MetaSV_528:HG2_Ill_GATKHCSBGrefine_7539;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7539:HG2_Ill_MetaSV_528:HG3_Ill_GATKHCSBGrefine_7443;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0802292;ClusterMaxSizeDiff=0.0630372;ClusterMaxEditDist=0.22409;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=174;DistBack=32466;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=186;REFWIDENED=10:30018601-30018786;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=553.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:19:0|1:18:2:1:17:./.:1:7:19:0:0/1:11:4:./.:.:.:.:.:.
chr10	30896100	HG3_Ill_150bpfermikitraw_14054	C	CAAAGTGCTGGGATTACAGGCGTAAGCCACCGCTAATTTTTGTATTTTTAGTAAAGACGGAGTTTCACTATGTTGGCCAGGATGGTCTTGATCTCTTGACCTCGTGATCTGCCCCCCTCGGCTTCCA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1340:HG2_PB_PB10Xdip_3673:HG3_PB_pbsv_10919:HG2_PB_PB10Xdip_3672:HG2_PB_pbsv_11194:HG4_PB_HySA_16301:HG2_PB_HySA_20223:HG4_Ill_manta_2677:HG4_Ill_MetaSV_533:HG2_PB_SVrefine2PB10Xhap12_8168:HG4_Ill_GATKHC_17945:HG4_Ill_GATKHCSBGrefine_7723:HG3_Ill_manta_2567:HG3_Ill_MetaSV_500:HG3_Ill_GATKHC_17835:HG3_Ill_GATKHCSBGrefine_7445:HG3_Ill_250bpfermikitraw_14520:HG3_Ill_150bpfermikitraw_14054:HG2_Ill_manta_3153:HG2_Ill_SVrefine2DISCOVARplusDovetail_1341:HG2_Ill_MetaSV_529:HG2_Ill_GATKHC_17911:HG2_Ill_GATKHCSBGrefine_7540:HG2_Ill_250bpfermikitraw_14920:HG2_Ill_150bpfermikitraw_14023:HG3_PB_HySA_16872:HG4_PB_SVrefine2PBcRDovetail_5633:HG4_Ill_SVrefine2DISCOVARDovetail_8000:HG3_PB_SVrefine2PBcRDovetail_5247:HG3_Ill_SVrefine2DISCOVARDovetail_8215:HG2_PB_SVrefine2PBcRplusDovetail_1156:HG2_PB_SVrefine2Falcon2Bionano_5370:HG2_PB_SVrefine2Falcon1plusDovetail_1210:HG4_PB_pbsv_11204;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14023:HG2_Ill_250bpfermikitraw_14920:HG2_Ill_GATKHCSBGrefine_7540:HG2_Ill_GATKHC_17911:HG2_Ill_MetaSV_529:HG2_Ill_SVrefine2DISCOVARplusDovetail_1341:HG2_Ill_manta_3153:HG3_Ill_150bpfermikitraw_14054:HG3_Ill_250bpfermikitraw_14520:HG3_Ill_GATKHCSBGrefine_7445:HG3_Ill_GATKHC_17835:HG3_Ill_MetaSV_500:HG3_Ill_manta_2567:HG4_Ill_GATKHCSBGrefine_7723:HG4_Ill_GATKHC_17945;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0775194;ClusterMaxSizeDiff=0.0694981;ClusterMaxEditDist=0.317829;PBcalls=14;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=126;DistBack=-30;DistForward=4390;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=131;REFWIDENED=10:30896002-30896132;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=554.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:44:1/1:0:10:0:16:1/1:0:11:0:11:1/1:1:33:./.:.:.:.:.:.
chr10	31067943	HG2_Ill_manta_3154	G	GAAGAAGAGGCGGGAAGGAGGAAGGGGAGGAGGAGAATGAGAAGGATAAGAAGAAGAAGGAGTAGGAGA	20	PASS	ClusterIDs=HG3_PB_HySA_16876:HG3_PB_pbsv_10922:HG3_Ill_svaba_14087:HG2_PB_pbsv_11196:HG3_Ill_GATKHC_17838:HG3_Ill_GATKHCSBGrefine_7447:HG3_Ill_250bpfermikitraw_14523:HG3_Ill_150bpfermikitraw_14057:HG2_Ill_svaba_13926:HG2_Ill_manta_3154:HG2_Ill_GATKHC_17918:HG2_PB_HySA_20230;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHC_17918:HG2_Ill_manta_3154:HG2_Ill_svaba_13926:HG3_Ill_150bpfermikitraw_14057:HG3_Ill_250bpfermikitraw_14523:HG3_Ill_GATKHCSBGrefine_7447:HG3_Ill_GATKHC_17838:HG3_Ill_svaba_14087;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0431655;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.246377;PBcalls=4;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=5196;DistForward=93410;DistMin=5196;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=9;REFWIDENED=10:31067942-31067953;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:16:./.:11:18:13:2:./.:27:1:4:29:0/1:19:20:./.:.:.:.:.:.
chr10	32320796	HG2_Ill_GATKHCSBGrefine_7545	G	GGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGACAATCACTTGAAACCAGAAGGCAGAGGTTGCAATGAGCCGCGACTGTGCCACAGCACTCCAGCCTGGGCAACAACAGTGAAACTCCGTCTCAAAAAAAAAAAAAAAAATTTTAGATTTGCTTTCAGCAACAAGTGATGACATTTGTGCTATGCCATGGAAAAACCTGGTATCAGCCAGGTGCAGTGGCTCACACCTGTAATCACAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTGAGGTCAGGAGTTGGAGACCAGCCTGGCCAACGTGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1350:HG4_PB_assemblyticsfalcon_2596:HG4_PB_pbsv_11211:HG2_PB_pbsv_11200:HG4_PB_SVrefine2Falcon1Dovetail_6808:HG4_PB_HySA_16316:HG4_Ill_GATKHCSBGrefine_7725:HG2_Ill_MetaSV_532:HG2_Ill_GATKHCSBGrefine_7545:HG2_PB_SVrefine2Falcon1plusDovetail_1215;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7545:HG2_Ill_MetaSV_532:HG4_Ill_GATKHCSBGrefine_7725;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0596206;ClusterMaxSizeDiff=0.0542005;ClusterMaxEditDist=0.209524;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=364;DistBack=-1;DistForward=34;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=10:32320646-32320943;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=556.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:23:25:./.:15:7:4:8:1|0:1:6:25:0:0/1:25:13:0/1:4:31:.:.:.
chr10	32674065	HG3_Ill_GATKHCSBGrefine_7452	T	TATGCCTATCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4164:HG2_PB_pbsv_11203:HG3_PB_pbsv_10928:HG3_PB_HySA_16889:HG2_PB_assemblyticsfalcon_2660:HG3_PB_assemblyticsfalcon_2662:HG4_PB_assemblyticsfalcon_2599:HG2_PB_SVrefine2Falcon2Bionano_5376:HG2_Ill_GATKHCSBGrefine_7548:HG3_Ill_MetaSV_503:HG3_Ill_GATKHCSBGrefine_7452:HG2_PB_SVrefine2PB10Xhap12_8175:HG2_PB_SVrefine2PBcRplusDovetail_1163:HG3_PB_SVrefine2Falcon1Dovetail_6759:HG4_PB_SVrefine2Falcon1Dovetail_6809:HG2_PB_HySA_20253:HG2_PB_PB10Xdip_3695;NumClusterSVs=17;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_7452;NumExactMatchSVs=1;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.231481;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=19264;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=10:32674066-32674078;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=557.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:17:32:0|1:17:1:0:38:0|1:29:0:0:13:0/1:22:9:0/1:7:52:.:.:.
chr10	32732243	HG2_PB_SVrefine2PB10Xhap12_8177	G	GATAAACCCAGTTGCTGTTACTCCATCTTGGCTGGAAGCAGAACCCTTCAC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_14936:HG4_PB_pbsv_11214:HG3_PB_assemblyticsfalcon_2666:HG2_PB_HySA_20256:HG2_PB_PB10Xdip_3697:HG2_PB_PB10Xdip_3696:HG4_PB_HySA_16319:HG4_PB_SVrefine2PBcRDovetail_5639:HG4_Ill_Krunchall_15515:HG4_Ill_GATKHC_17966:HG4_Ill_250bpfermikitraw_14811:HG2_PB_SVrefine2PBcRplusDovetail_1165:HG2_PB_SVrefine2PB10Xhap12_8177:HG2_PB_SVrefine2Falcon1plusDovetail_1218:HG2_Ill_SVrefine2DISCOVARplusDovetail_1354:HG2_Ill_Krunchall_15253:HG2_Ill_GATKHC_17937;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14936:HG4_PB_SVrefine2PBcRDovetail_5639:HG4_Ill_Krunchall_15515:HG4_Ill_GATKHC_17966:HG4_Ill_250bpfermikitraw_14811:HG2_PB_SVrefine2PBcRplusDovetail_1165:HG2_PB_SVrefine2PB10Xhap12_8177:HG2_PB_SVrefine2Falcon1plusDovetail_1218:HG2_Ill_SVrefine2DISCOVARplusDovetail_1354:HG2_Ill_Krunchall_15253:HG2_Ill_GATKHC_17937;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.205607;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=10:32732244-32732345;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:28:./.:6:13:13:7:./.:8:8:16:0:0/1:25:24:./.:.:.:.:.:.
chr10	32936398	HG4_Ill_GATKHCSBGrefine_7729	A	ACTGCACTCCAGCTTGGGTGACAGAGTGAGACCCTGTCTCAAAAACAAAAAGTTCT	20	PASS	ClusterIDs=HG2_PB_pbsv_11206:HG4_PB_assemblyticsfalcon_2604:HG3_PB_pbsv_10930:HG2_PB_assemblyticsfalcon_2669:HG2_PB_PB10Xdip_3699:HG2_PB_PB10Xdip_3698:HG4_PB_HySA_16320:HG4_Ill_svaba_14019:HG4_Ill_manta_2679:HG4_Ill_SVrefine2DISCOVARDovetail_8010:HG4_Ill_Krunchall_15520:HG4_Ill_GATKHC_17969:HG4_Ill_GATKHCSBGrefine_7729:HG4_Ill_FB_9667:HG4_Ill_250bpfermikitraw_14815:HG4_Ill_150bpfermikitraw_14189:HG3_PB_assemblyticsfalcon_2668:HG3_Ill_svaba_14098:HG3_Ill_manta_2569:HG3_Ill_Spiral_11674:HG3_Ill_SVrefine2DISCOVARDovetail_8226:HG3_Ill_Krunchall_14957:HG3_Ill_GATKHC_17853:HG3_Ill_GATKHCSBGrefine_7454:HG3_Ill_FB_9641:HG3_Ill_250bpfermikitraw_14536:HG3_Ill_150bpfermikitraw_14068:HG2_PB_SVrefine2PBcRplusDovetail_1166:HG2_PB_SVrefine2PB10Xhap12_8178:HG2_PB_SVrefine2Falcon2Bionano_5378:HG2_PB_SVrefine2Falcon1plusDovetail_1219:HG2_Ill_svaba_13940:HG2_Ill_manta_3156:HG2_Ill_SpiralSDKrefine_1677:HG2_Ill_SVrefine2DISCOVARplusDovetail_1355:HG2_Ill_Krunchall_15256:HG2_Ill_GATKHC_17940:HG2_Ill_GATKHCSBGrefine_7550:HG2_Ill_FB_9641:HG2_Ill_250bpfermikitraw_14939:HG2_Ill_150bpfermikitraw_14042:HG2_10X_SVrefine210Xhap12_7874:HG3_PB_HySA_16893;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7874:HG2_Ill_150bpfermikitraw_14042:HG2_Ill_250bpfermikitraw_14939:HG2_Ill_FB_9641:HG2_Ill_GATKHCSBGrefine_7550:HG2_Ill_GATKHC_17940:HG2_Ill_Krunchall_15256:HG2_Ill_SVrefine2DISCOVARplusDovetail_1355:HG2_Ill_SpiralSDKrefine_1677:HG2_Ill_manta_3156:HG2_Ill_svaba_13940:HG2_PB_SVrefine2Falcon1plusDovetail_1219:HG2_PB_SVrefine2Falcon2Bionano_5378:HG2_PB_SVrefine2PB10Xhap12_8178:HG2_PB_SVrefine2PBcRplusDovetail_1166:HG3_Ill_150bpfermikitraw_14068:HG3_Ill_250bpfermikitraw_14536:HG3_Ill_FB_9641:HG3_Ill_GATKHCSBGrefine_7454:HG3_Ill_GATKHC_17853:HG3_Ill_Krunchall_14957:HG3_Ill_SVrefine2DISCOVARDovetail_8226:HG3_Ill_Spiral_11674:HG3_Ill_manta_2569:HG3_Ill_svaba_14098:HG3_PB_assemblyticsfalcon_2668:HG4_Ill_150bpfermikitraw_14189:HG4_Ill_250bpfermikitraw_14815:HG4_Ill_FB_9667:HG4_Ill_GATKHCSBGrefine_7729:HG4_Ill_GATKHC_17969:HG4_Ill_Krunchall_15520:HG4_Ill_SVrefine2DISCOVARDovetail_8010:HG4_Ill_manta_2679:HG4_Ill_svaba_14019:HG4_PB_assemblyticsfalcon_2604;NumExactMatchSVs=36;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.0877193;ClusterMaxEditDist=0.25641;PBcalls=13;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=29;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=55;DistBack=30229;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:32936399-32936400;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=559.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:58:1/1:0:24:5:29:1/1:0:21:1:26:1/1:0:68:./.:.:.:.:.:.
chr10	33384361	HG2_10X_SVrefine210Xhap12_7876	C	CCAATTCCTTTGTGATAATAGGGTTTTTTTTCCTATTATATCAACAGAACAGCACTTTGGAACATATGCACTTGAATACGTGATTTTACCAAATCAAGGAAATATCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7876:HG2_PB_pbsv_11208:HG4_PB_HySA_16324:HG4_PB_pbsv_11217:HG2_PB_HySA_20265:HG4_Ill_svaba_14023:HG2_Ill_svaba_13945:HG2_Ill_SVrefine2DISCOVARplusDovetail_1357:HG2_Ill_GATKHC_17946:HG2_Ill_GATKHCSBGrefine_7553;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7876:HG4_Ill_svaba_14023:HG2_Ill_svaba_13945:HG2_Ill_SVrefine2DISCOVARplusDovetail_1357:HG2_Ill_GATKHC_17946:HG2_Ill_GATKHCSBGrefine_7553;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0458716;ClusterMaxSizeDiff=0.0366972;ClusterMaxEditDist=0.218182;PBcalls=4;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=106;DistBack=67104;DistForward=61;DistMin=61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=102;REFWIDENED=10:33384362-33384463;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:27:0:0:29:./.:1:29:6:1:0/1:13:22:./.:.:.:.:.:.
chr10	33416972	HG2_PB_PB10Xdip_3700	A	ACCCTCCTCCCCTCCCCTCCCCCCTCCCCTCCCCTCCCCCTCCCTCCCCTACCCCCTTCCCTTCCCTCCCCTCCCCCTCCCTCC	10	PASS	ClusterIDs=HG3_PB_pbsv_10932:HG2_PB_HySA_20266:HG2_PB_PB10Xdip_3701:HG2_PB_PB10Xdip_3700:HG4_PB_pbsv_11218:HG2_PB_pbsv_11209;NumClusterSVs=6;ExactMatchIDs=HG2_PB_PB10Xdip_3700:HG2_PB_PB10Xdip_3701;NumExactMatchSVs=2;ClusterMaxShiftDist=0.060241;ClusterMaxSizeDiff=0.0238095;ClusterMaxEditDist=0.228916;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=83;DistBack=-116;DistForward=47;DistMin=-116;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=272;REFWIDENED=10:33416817-33417088;PctSeqSimilarity=0.9941;PctSizeSimilarity=0.9881;PctRecOverlap=0.9765;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=562.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:33:1/1:1:18:3:13:./.:0:1:1:3:./.:0:0:./.:.:.:.:.:.
chr10	34177839	HG2_PB_SVrefine2Falcon1plusDovetail_1221	T	TAATTTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC	10	PASS	ClusterIDs=HG2_PB_pbsv_11212:HG4_PB_pbsv_11220:HG2_PB_assemblyticsfalcon_2677:HG4_PB_assemblyticsfalcon_2610:HG3_PB_assemblyticsfalcon_2676:HG2_PB_SVrefine2PBcRplusDovetail_1170:HG2_PB_SVrefine2PB10Xhap12_8182:HG2_PB_SVrefine2Falcon1plusDovetail_1221:HG2_PB_PB10Xdip_3705:HG2_PB_PB10Xdip_3704:HG3_PB_SVrefine2Falcon1Dovetail_6760:HG2_PB_SVrefine2Falcon2Bionano_5381:HG2_PB_HySA_20276:HG3_PB_pbsv_10936;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1221:HG2_PB_SVrefine2PB10Xhap12_8182:HG2_PB_SVrefine2PBcRplusDovetail_1170;NumExactMatchSVs=3;ClusterMaxShiftDist=0.138386;ClusterMaxSizeDiff=0.138386;ClusterMaxEditDist=0.191104;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=306;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:34177840-34177854;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=563.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:6:33:0:15:./.:0:5:0:4:1/1:0:15:1/1:1:61:.:.:.
chr10	34523082	HG2_Ill_GATKHC_17960	G	GTAACTACTTTGTAATCAATTTCTGATATAACTACTGATATATAACTACTTTGTAATCAATTTCTGATATAACTACTGATACGTAACTACTTTGTAATCAATTTCTGATATAACTACTGATATA	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_8235:HG2_PB_HySA_20280:HG3_PB_pbsv_10937:HG3_Ill_GATKHC_17873:HG2_PB_pbsv_11213:HG2_Ill_GATKHC_17960;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHC_17960:HG3_Ill_GATKHC_17873;NumExactMatchSVs=2;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.25641;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=123;DistBack=11;DistForward=7811;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=215;REFWIDENED=10:34522959-34523173;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:36:0|1:40:1:2:36:./.:11:0:3:24:0/1:19:38:./.:.:.:.:.:.
chr10	34571023	HG3_PB_HySA_16904	T	TAAAATACAAGTGCACCGGGTGGCAGCCTGTAATCCCAGCACTTTGGGAGGCGAGGCGGCGGATCACGAGTCAGGAGATCGAGACCATCCGGCTACGGTAAACCCCGTCTCTACTAAAATACAAAAAATTAGCTGGGTATGCGCGCCTGAGTCCCAGCACTTGGAGGCTGAGAGAATGGCTTGACCCGGAGGCAGAGCTTGCGTGAGCCGTCACTGCACTCCAGCCTGGGCGAGAGCGAGACTCCGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_HySA_16904:HG2_PB_SVrefine2Falcon1plusDovetail_1222:HG3_PB_pbsv_10938:HG2_PB_pbsv_11214:HG2_PB_assemblyticsfalcon_2681;NumClusterSVs=5;ExactMatchIDs=HG3_PB_HySA_16904;NumExactMatchSVs=1;ClusterMaxShiftDist=0.207792;ClusterMaxSizeDiff=0.207792;ClusterMaxEditDist=0.238806;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=275;DistBack=54;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=10:34571024-34571036;PctSeqSimilarity=0.9154;PctSizeSimilarity=0.8436;PctRecOverlap=0.841;SizeDiff=-51;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=86;MatchId=566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:32:./.:21:9:7:16:./.:26:0:3:1:0/1:43:7:./.:.:.:.:.:.
chr10	35899757	HG2_10X_SVrefine210Xhap12_7888	TTTTATTT	AATAACAAAAAAAGGTGAACCAATTCCTCATCAAAATGATGGGCACTTTGACTCTTCTAAAGAAGACCTTGACGATGAAATGTCTTCAAACATGGAGAATAACAGCCTGCTTGGTGTATCTGCAGGATGTCAAGGCAATTGGTCCAAACATTAAACAAAAATCCCAAATTGGTTTTGGCATAAAGCTATTTGAATGAATGTGCCTATTTTAATATATTCTCTCTCTCTCTCTCTCCTTTCTCTCACTTTTGCTCCTTAAGCCACTGAAAGCTGTGAGTGATGCCTCCAACCACTGTCTTCAATACTTAGATCAATGTCTGGCACATAGTGGCTGCTCAAAAAATTGTTTGTTTTTTTTTCATCTGATATTCCTGAAGCATTCAGGGGCAAATCTTGTTGTCCCTTGTAGTGTCCAATTCTGGTGGACTTCCCAAGTCTCTCTAAGTCTTCCCAGTCTTATAGAGATAAAGGATTTCTTTCTTTCTTTCTCCTTCCTTCCTCCCTCCCTCTCTCCCTCCGTCCCTCTCTCCCTCCCTCCCTCTCTTCCTCCCTCTCTCTTTTTCTCTTTCTCTCTTTCTCTTTCTTTCTTTCTTTTTTTTTCTTTCTTTCCTTCCTTCCTTCCTTTCTTCCTTCCTTCTTCCTTCCTTCCTCTTTCTTTCTTTCTTTCTTTCTTCTCTTTCTTTCTTTCCTGTTAATCTCTTTCCTTTCTTCTGATCTTCCTTCTTTTCATTTTCGAGGCAGGGTCTTGCTCTGTCACTCAGGCTGGAGTGCAGTGGCGTGATCATGGTTCACTGCATGAGCTCCCTCTGGGAGAGGGAGGGTAAGGGAGAGGGTAAGGGGCCTAGGGTAGGAGATCTGGGCTCTGGCCTCATGCCCGCCATTGCCTAGCAGATCGCTCCCTCCCCTGGGCCTCAGTCTTCTCCCCTGCATGATGAGGGGCCCTGACCAGGGGATTCTTTAGTGCTCTATGAGGGTGAGACTCCATCAGTGAGATGTGAGGCTGTCAGTCATCTTAGCATTAATAGGGACTCATTTATGAGGCCTATCCAGCTACCTGCCTGCATGCAGGTTTTGATCAGATGAAAATGGTAAGGACAATAGAGGCCTGTGTGTCCTTAGAGGAGCTGCCATGGCGAGGATGTGAAGAAAAGGGAATACTCGTTCTCTCTTGTGCACTGTTGGTGGGAATGTAAATTAGCACAACCACTATGGAGAACAGCATGGAGGTTTCTCAAAAAACTGAAAATAGAGATATAGGATCCAGCAATCCTACTGCTGGGTATGTACCCCAAAGAAAAGAAACCAGAATGTCAAAGAGATAGCTGCACTCCCATGTTTATTGCAACACTAGTCACAATAGCAAAGATGTGGAAACAACCTAAGGGTCCATCAGTTGATGGATGGATAAAGACAATGTGGTTTATATGCAGAATGGAGTACTATTCAGACATAAAAAGGATGAAATCTTGTTATTGGCAGCAACATGGATGGATCTGGAGGACATTATTTTATGTGAAATGAGCCAGGCACAAAAAGACAAATGTCACAGGCTCTCACTCCTATGTGGGAGCTGAAGAAGCGGATCTCATGGAGGTAGAGAGTAGAATGGGGGTCACTAGAGAAGGGGATGGCGAGGGGGCCTGAAGGGAAAAAGAAAGAATACAAATGCACTTATTACCACCAAGGTGTACACTGAACAGTGATAAAGATGGTAGATTATGTATGTCTATTTTACC	20	PASS	ClusterIDs=HG2_PB_pbsv_11219:HG3_PB_SVrefine2Falcon1Dovetail_6761:HG4_PB_SVrefine2PBcRDovetail_5646:HG2_PB_SVrefine2Falcon1plusDovetail_1229:HG2_PB_SVrefine2Falcon2Bionano_5386:HG2_Ill_SVrefine2DISCOVARplusDovetail_1370:HG2_10X_SVrefine210Xhap12_7888:HG2_PB_SVrefine2PBcRplusDovetail_1174:HG2_PB_SVrefine2PB10Xhap12_8188:HG2_PB_PB10Xdip_3711;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7888:HG2_Ill_SVrefine2DISCOVARplusDovetail_1370;NumExactMatchSVs=2;ClusterMaxShiftDist=0.1342;ClusterMaxSizeDiff=0.1342;ClusterMaxEditDist=0.201596;PBcalls=8;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=1728;DistBack=15352;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:35899765-35899756;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9994;PctRecOverlap=0.9948;SizeDiff=-1;StartDistance=2;EndDistance=9;GTMatch=0;TruScore=99;MatchId=568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:35:./.:5:17:17:8:./.:1:8:20:0:0/1:16:25:0/1:61:140:.:3956:.
chr10	36946385	HG3_Ill_MetaSV_512	G	GTTAGCCAGGATGGTATCGATCTCCTGACCTCGTGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGACATGAGCCACCGCGCCCGGCCTAAATGGATCTATTCTTTTTTTTTAGACAGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCCATCTCGGCTTACTGCTAGCTCCGCCTCCCGGGTTCATGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAAGCGCCCGCCACCATGCCCGGCTAATTCTTTGTGTTTTTAGTAGAGACGGGATTTCACCGTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1234:HG3_PB_HySA_16927:HG3_PB_pbsv_10951:HG4_PB_pbsv_11235:HG2_PB_PB10Xdip_3722:HG2_PB_PB10Xdip_3721:HG4_PB_HySA_16352:HG2_PB_HySA_20306:HG4_Ill_MetaSV_542:HG4_Ill_GATKHCSBGrefine_7741:HG3_Ill_MetaSV_512:HG3_Ill_GATKHCSBGrefine_7467:HG2_Ill_manta_3162:HG2_Ill_MetaSV_537:HG2_Ill_GATKHCSBGrefine_7564:HG2_PB_pbsv_11225:HG2_PB_SVrefine2Falcon2Bionano_5390:HG2_PB_SVrefine2PBcRplusDovetail_1178:HG2_PB_SVrefine2PB10Xhap12_8193:HG2_Ill_SVrefine2DISCOVARplusDovetail_1376:HG2_10X_SVrefine210Xhap12_7894:HG4_PB_SVrefine2PBcRDovetail_5652:HG4_Ill_SVrefine2DISCOVARDovetail_8024:HG3_PB_SVrefine2PBcRDovetail_5250:HG3_Ill_SVrefine2DISCOVARDovetail_8249;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7564:HG2_Ill_MetaSV_537:HG2_Ill_manta_3162:HG3_Ill_GATKHCSBGrefine_7467:HG3_Ill_MetaSV_512:HG4_Ill_GATKHCSBGrefine_7741:HG4_Ill_MetaSV_542;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0641026;ClusterMaxSizeDiff=0.0576923;ClusterMaxEditDist=0.182692;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=304;DistBack=-111;DistForward=28488;DistMin=-111;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=309;REFWIDENED=10:36946193-36946501;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:2:26:0:30:./.:3:2:2:5:1/1:2:26:1/1:2:42:.:.:.
chr10	43418951	HG4_Ill_Krunchall_15660	A	AACATTGTTTCACGTGTTTATTGACCATCTGCATATCTTCTTTGGTGATATCTATTCG	20	PASS	ClusterIDs=HG4_PB_HySA_16393:HG2_PB_pbsv_11258:HG2_PB_PB10Xdip_3817:HG4_PB_pbsv_11277:HG2_PB_PB10Xdip_3816:HG2_10X_SVrefine210Xhap12_7908:HG4_Ill_svaba_14117:HG4_Ill_SVrefine2DISCOVARDovetail_8042:HG4_Ill_Krunchall_15660:HG4_Ill_GATKHC_18109:HG4_Ill_GATKHCSBGrefine_7773:HG4_Ill_250bpfermikitraw_14935:HG4_Ill_150bpfermikitraw_14313:HG2_PB_SVrefine2PBcRplusDovetail_1190:HG2_PB_SVrefine2PB10Xhap12_8207:HG2_Ill_svaba_14029:HG2_Ill_Krunchall_15369:HG2_Ill_GATKHC_18065:HG2_Ill_GATKHCSBGrefine_7589:HG2_Ill_250bpfermikitraw_15047:HG2_Ill_150bpfermikitraw_14147:HG4_PB_SVrefine2PBcRDovetail_5664;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14147:HG2_Ill_250bpfermikitraw_15047:HG2_Ill_GATKHCSBGrefine_7589:HG2_Ill_GATKHC_18065:HG2_Ill_Krunchall_15369:HG2_Ill_svaba_14029:HG2_PB_SVrefine2PB10Xhap12_8207:HG2_PB_SVrefine2PBcRplusDovetail_1190:HG4_Ill_150bpfermikitraw_14313:HG4_Ill_250bpfermikitraw_14935:HG4_Ill_GATKHCSBGrefine_7773:HG4_Ill_GATKHC_18109:HG4_Ill_Krunchall_15660:HG4_Ill_SVrefine2DISCOVARDovetail_8042:HG4_Ill_svaba_14117;NumExactMatchSVs=15;ClusterMaxShiftDist=0.176;ClusterMaxSizeDiff=0.176;ClusterMaxEditDist=0.28125;PBcalls=8;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=57;DistBack=-57;DistForward=-1;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=10:43418952-43419009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=570.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:41:1|0:5:35:19:2:./.:17:0:2:37:0/1:24:35:./.:.:.:.:.:.
chr10	43677327	HG2_PB_PB10Xdip_3820	TCA	CAAAATAAACATTGAAAATCAAAAAAAAAATAGGACGTGGTCATGCTGTATCGCTACTGGAGCTCAAAAGAAAATTGTTTAACAGATGGCTGGGCACAGTGACTAACACTTGTAGTCTGAATGCTTTCAGAGGCCAAGACAGAAGGGCTTAAGGCTAGGAGTTTGAGACCAGCCTGGGCAACAGAGTGCAACCCTGTCTCTACAAAAATTTTCTTTAATTGGCCAGGTGTGGTGGCACACACCTATAGTTCTAGCTACTCAGGAGGCTGAGGCAGGAGGATTGCTTAAGCCCAGGAGTTTGAGGTTACAGTGAGCTATGATCATCCTACTTCACTCCAGCTTGGGTGACAGAGAGCTTGTCTCTAAAAAAAATAGAATTAATTTGGAAGCCTCACTCTTAATTAAAGAATTTTTTTCTAGGTTTTTAAGAATCAGTTTTCTAGCTCTTCAAAAAAAATCTGGTTTGCATTCTCCCTGCATCCTTAAAACGTTAGTTGTTTAGCTTGAACCTGGCTTGAAAATAGTCTTGACTTTATCTCCCGTTTTATGGGTCAGCCCACTATCGGGGGAAATTCACCCCCAATATTTCACGTAGGTTCTTTTCTATTTTCCCTAAGTGTCGGCCAGTCTGAGAAATAGAGGGACAGAGTACAAAAGAGAGAAATTTTAAAGCTGGGTGTCCAAGGGAGACATCACATGTTGGCAGGTTCCGTGATGCCCCCAAGCCACAAAACCAGCAAGTTTTTATTAGTGATTTTCAAAAAGGGAGGGAGTGTACAAATAGGGTGTGGGTCACAAAGATCACATGCTTCACAAGGTAATAAAATATCACAAGGCAAATAGAGGCAGGGCGAGATCACAGGACCACAGGACCAGGGTGAAATTAAAATTGCTAATGAAGTTTTGGGCATGCATTGTCATTGATAACATCTTATCAGGAGACAGGGTTTGAGAGCAGACAACTGGTCTGACCAAAATTTATTAGCCGGGAATTTCCTCATCCTAATAAGCCTGGGAGCACTACGGGAGACTGTGGCTTATTTCATCCCCTATCTATGACCGTAAAAGACAGCGTCCCAGAGGGCCATTTCAGAGGCCTCCCTTAGGGAACATTCTCTTTCTCAGGAGTTCTTGCTGAGAAAAAGAATTCAGTGATATTTCTCCTATTTGCTTTTGAAAGAAGAGAAATATGGCTCTGTTCCGCCTCACAGGCAGCCAGAGTTTAAGGTTATCTCCTTGTTCCCTGACATTGCTGTTATCTGTTCTTAAGGTGCCAGTTTGATATTGTTCAAACACACATGCTCTACAACAATTTGTGCAGTTAATGCAATCATCACAGGGTCCTGAGGTGACATACTCCTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3820:HG2_PB_pbsv_11260:HG2_PB_HySA_20365:HG4_PB_pbsv_11279:HG2_PB_assemblyticsfalcon_2759:HG2_PB_assemblyticsPBcR_2684:HG4_PB_assemblyticsfalcon_2661:HG2_PB_HySA_20364:HG2_PB_HySA_20363:HG2_PB_SVrefine2PBcRplusDovetail_1192:HG2_PB_SVrefine2Falcon1plusDovetail_1252:HG3_PB_SVrefine2Falcon1Dovetail_6783:HG4_PB_SVrefine2Falcon1Dovetail_6826:HG4_PB_SVrefine2PBcRDovetail_5665:HG4_Ill_SVrefine2DISCOVARDovetail_8046:HG2_10X_SVrefine210Xhap12_7909:HG4_PB_HySA_16396:HG2_PB_SVrefine2PB10Xhap12_8208;NumClusterSVs=18;ExactMatchIDs=HG2_PB_PB10Xdip_3820:HG2_PB_SVrefine2PB10Xhap12_8208;NumExactMatchSVs=2;ClusterMaxShiftDist=0.102475;ClusterMaxSizeDiff=0.102475;ClusterMaxEditDist=0.18121;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=1359;DistBack=29105;DistForward=11619;DistMin=11619;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:43677330-43677326;PctSeqSimilarity=0.9721;PctSizeSimilarity=0.9457;PctRecOverlap=0.9471;SizeDiff=-78;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=95;MatchId=571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:44:0|1:36:0:1:41:./.:32:0:3:0:0/1:29:6:0/1:52:104:.:1417:.
chr10	43706291	HG3_PB_SVrefine2PBcRDovetail_5253	A	AGAGCAGCAGCCCCTTGCAGGGAGTTGGGGACAGGCTTGCACCCAGTAGCCCCTCTGACTCCTTGGAGCAGCAGCCCCTTGCAGGGAGTGGGGGACAGGCTTGCACGCAGCAGCCCCTCTGACTCCTTGGAGCAGCAGCTCCTTGCAGGGAGTGGGGGACAGGCTTGCACCCAGTAGCCCCTCTGACTCCTTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1253:HG3_PB_HySA_16973:HG4_PB_HySA_16397:HG3_PB_pbsv_10985:HG2_10X_SVrefine210Xhap12_7910:HG2_PB_pbsv_11261:HG4_PB_SVrefine2Falcon1Dovetail_6827:HG3_PB_SVrefine2PBcRDovetail_5253:HG3_PB_SVrefine2Falcon1Dovetail_6784;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_5253;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0981912;ClusterMaxSizeDiff=0.0981912;ClusterMaxEditDist=0.204489;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=192;DistBack=7766;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=196;REFWIDENED=10:43706292-43706487;PctSeqSimilarity=0.9883;PctSizeSimilarity=1;PctRecOverlap=0.4508;SizeDiff=0;StartDistance=-106;EndDistance=-106;GTMatch=0;TruScore=81;MatchId=572.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:26:0|1:28:1:1:29:1|0:0:6:6:0:0/1:17:9:./.:.:.:.:.:.
chr10	47061089	HG4_Ill_manta_2697	T	CTCTATAATCTATAACCAGGTGTACCCAAACTTTGAGGAGATTCTGCTCCAATGTAACTTATGTAATTAGAGATTACATAATTACATAATGTAGTTAGAGATTATGCC	20	PASS	ClusterIDs=HG2_Ill_manta_3180:HG3_PB_pbsv_10994:HG4_Ill_GATKHCSBGrefine_7781:HG3_Ill_GATKHCSBGrefine_7501:HG2_Ill_GATKHCSBGrefine_7597:HG4_Ill_manta_2697:HG3_Ill_manta_2584;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_manta_3180:HG4_Ill_manta_2697:HG3_Ill_manta_2584;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0458716;ClusterMaxSizeDiff=0.0366972;ClusterMaxEditDist=0.0825688;PBcalls=1;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=107;DistBack=17;DistForward=58;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=73;REFWIDENED=10:47061076-47061148;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9907;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=574.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:88:34:./.:53:7:19:17:./.:32:23:17:0:0/1:113:21:./.:.:.:.:.:.
chr10	48419943	HG2_Ill_breakscan11_4172	C	ATAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4172:HG3_PB_assemblyticsfalcon_2778:HG2_PB_pbsv_11278:HG4_PB_pbsv_11300:HG4_PB_assemblyticsfalcon_2681:HG4_PB_SVrefine2PBcRDovetail_5673:HG4_PB_SVrefine2Falcon1Dovetail_6839:HG3_PB_SVrefine2Falcon1Dovetail_6797;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_breakscan11_4172;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115806;ClusterMaxSizeDiff=0.115806;ClusterMaxEditDist=0.174962;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=8988;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:48419944-48419942;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.9904;PctRecOverlap=0.9872;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:40:0|1:32:6:2:25:./.:19:0:1:7:0/1:25:12:0/1:7:17:.:.:.
chr10	50131551	HG4_Ill_GATKHCSBGrefine_7790	A	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATG	20	PASS	ClusterIDs=HG2_PB_pbsv_11285:HG4_Ill_GATKHC_18147:HG4_Ill_GATKHCSBGrefine_7790:HG4_PB_pbsv_11306:HG4_PB_HySA_16433;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_7790:HG4_Ill_GATKHC_18147;NumExactMatchSVs=2;ClusterMaxShiftDist=0.102941;ClusterMaxSizeDiff=0.0882353;ClusterMaxEditDist=0.218978;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=82216;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:50131544-50131558;PctSeqSimilarity=0.9844;PctSizeSimilarity=0.9688;PctRecOverlap=0.9692;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=577.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:35:0|1:23:5:1:17:./.:4:19:0:10:0/1:17:21:./.:.:.:.:.:.
chr10	50800477	HG2_PB_SVrefine2Falcon2Bionano_5409	A	AAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5682:HG4_PB_HySA_16439:HG4_PB_assemblyticsfalcon_2697:HG2_PB_assemblyticsPBcR_2723:HG2_PB_assemblyticsfalcon_2799:HG4_PB_SVrefine2Falcon1Dovetail_6844:HG3_PB_SVrefine2PBcRDovetail_5269:HG2_PB_SVrefine2PBcRplusDovetail_1211:HG2_PB_SVrefine2PB10Xhap12_8231:HG2_PB_SVrefine2Falcon2Bionano_5409:HG2_10X_SVrefine210Xhap12_7927:HG2_PB_SVrefine2Falcon1plusDovetail_1271:HG2_PB_HySA_20416:HG4_PB_pbsv_11310:HG3_PB_HySA_17020:HG2_PB_pbsv_11288:HG3_PB_pbsv_11011:HG2_PB_PB10Xdip_4416:HG2_PB_PB10Xdip_4415:HG3_Ill_SVrefine2DISCOVARDovetail_8276;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7927:HG2_PB_SVrefine2Falcon2Bionano_5409:HG2_PB_SVrefine2PB10Xhap12_8231:HG2_PB_SVrefine2PBcRplusDovetail_1211:HG3_PB_SVrefine2PBcRDovetail_5269:HG4_PB_SVrefine2Falcon1Dovetail_6844;NumExactMatchSVs=6;ClusterMaxShiftDist=0.124352;ClusterMaxSizeDiff=0.11399;ClusterMaxEditDist=0.260417;PBcalls=18;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=92;DistBack=44;DistForward=29429;DistMin=44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=10:50800437-50800488;PctSeqSimilarity=0.9915;PctSizeSimilarity=1;PctRecOverlap=0.7312;SizeDiff=0;StartDistance=25;EndDistance=25;GTMatch=0;TruScore=90;MatchId=578.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:2:18:1:20:./.:7:7:6:8:./.:4:0:./.:.:.:.:.:.
chr10	50830010	HG3_Ill_GATKHCSBGrefine_7514	G	GAGGGAGGGAGAAGGGAGGGAAGAGGAAGGAGATGGAAGGAAGAGGGAAGGAGGGAGGGGAGGCAGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7928:HG2_PB_pbsv_11289:HG2_PB_HySA_20417:HG3_PB_pbsv_11012:HG2_PB_assemblyticsfalcon_2800:HG3_PB_HySA_17021:HG4_Ill_Krunchall_15708:HG4_Ill_GATKHC_18156:HG4_Ill_GATKHCSBGrefine_7794:HG4_Ill_250bpfermikitraw_14972:HG4_Ill_150bpfermikitraw_14345:HG3_Ill_scalpel_10814:HG3_Ill_GATKHC_18026:HG3_Ill_GATKHCSBGrefine_7514:HG3_Ill_250bpfermikitraw_14677:HG3_Ill_150bpfermikitraw_14213:HG2_Ill_Krunchall_15412:HG2_Ill_GATKHC_18117:HG2_Ill_GATKHCSBGrefine_7610:HG2_Ill_250bpfermikitraw_15085:HG2_Ill_150bpfermikitraw_14182:HG2_PB_PB10Xdip_4418:HG2_PB_PB10Xdip_4417:HG4_PB_HySA_16440:HG4_PB_pbsv_11311:HG4_PB_SVrefine2PBcRDovetail_5683:HG4_PB_SVrefine2Falcon1Dovetail_6845:HG4_Ill_SVrefine2DISCOVARDovetail_8074:HG3_PB_SVrefine2Falcon1Dovetail_6804:HG3_Ill_SVrefine2DISCOVARDovetail_8277:HG2_PB_SVrefine2PBcRplusDovetail_1212:HG2_PB_SVrefine2PB10Xhap12_8232:HG2_PB_SVrefine2Falcon2Bionano_5410:HG2_Ill_SVrefine2DISCOVARplusDovetail_1425;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14182:HG2_Ill_250bpfermikitraw_15085:HG2_Ill_GATKHCSBGrefine_7610:HG2_Ill_GATKHC_18117:HG2_Ill_Krunchall_15412:HG3_Ill_150bpfermikitraw_14213:HG3_Ill_250bpfermikitraw_14677:HG3_Ill_GATKHCSBGrefine_7514:HG3_Ill_GATKHC_18026:HG3_Ill_scalpel_10814:HG4_Ill_150bpfermikitraw_14345:HG4_Ill_250bpfermikitraw_14972:HG4_Ill_GATKHCSBGrefine_7794:HG4_Ill_GATKHC_18156:HG4_Ill_Krunchall_15708;NumExactMatchSVs=15;ClusterMaxShiftDist=0.119403;ClusterMaxSizeDiff=0.103704;ClusterMaxEditDist=0.19697;PBcalls=15;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=66;DistBack=-79;DistForward=25775;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=95;REFWIDENED=10:50830001-50830095;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=579.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:45:1/1:1:21:0:18:./.:4:18:5:13:./.:3:24:./.:.:.:.:.:.
chr10	53495447	HG2_Ill_GATKHCSBGrefine_7616	A	AGTAGTTATAATACCTAATACAAAATGTAAATAGTTGTTATACTGCATTATTTAGGAATAATGACAAGGGAAAGTCTATATGTGTTTGG	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7616:HG4_PB_pbsv_11319:HG2_PB_SVrefine2Falcon2Bionano_5416:HG2_PB_pbsv_11297:HG4_Ill_svaba_14158:HG4_Ill_Krunchall_15725:HG4_Ill_GATKHCSBGrefine_7801:HG3_Ill_svaba_14233:HG2_Ill_svaba_14069:HG2_Ill_SVrefine2DISCOVARplusDovetail_1437:HG2_Ill_GATKHC_18141;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7616:HG4_Ill_svaba_14158:HG4_Ill_Krunchall_15725:HG4_Ill_GATKHCSBGrefine_7801:HG3_Ill_svaba_14233:HG2_Ill_svaba_14069:HG2_Ill_SVrefine2DISCOVARplusDovetail_1437:HG2_Ill_GATKHC_18141;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0874317;ClusterMaxSizeDiff=0.0765027;ClusterMaxEditDist=0.232804;PBcalls=3;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=96250;DistForward=26;DistMin=26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=88;REFWIDENED=10:53495448-53495535;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=581.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:./.:0:3:31:15:./.:2:0:1:23:0/1:14:21:./.:.:.:.:.:.
chr10	54466928	HG3_Ill_GATKHCSBGrefine_7528	T	TAAAAGTGTCCTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGATATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4174:HG4_PB_pbsv_11324:HG4_Ill_MetaSV_569:HG2_PB_pbsv_11304:HG2_PB_SVrefine2PB10Xhap12_8238:HG3_PB_assemblyticsfalcon_2816:HG2_PB_assemblyticsPBcR_2751:HG3_PB_SVrefine2PBcRDovetail_5278:HG3_PB_SVrefine2Falcon1Dovetail_6810:HG3_Ill_GATKHCSBGrefine_7528:HG2_PB_SVrefine2Falcon1plusDovetail_1276:HG2_Ill_MetaSV_558:HG4_PB_SVrefine2Falcon1Dovetail_6855:HG2_PB_SVrefine2Falcon2Bionano_5419:HG3_Ill_MetaSV_530:HG2_PB_SVrefine2PBcRplusDovetail_1220:HG3_PB_HySA_17057:HG3_PB_pbsv_11027;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_MetaSV_558:HG2_PB_SVrefine2Falcon1plusDovetail_1276:HG3_Ill_GATKHCSBGrefine_7528:HG3_PB_SVrefine2Falcon1Dovetail_6810:HG3_PB_SVrefine2PBcRDovetail_5278;NumExactMatchSVs=5;ClusterMaxShiftDist=0.130841;ClusterMaxSizeDiff=0.130841;ClusterMaxEditDist=0.221529;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=25718;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=10:54466929-54466942;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=582.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:32:0|1:24:3:1:24:1|0:0:12:31:0:0/1:23:12:0/1:12:34:.:.:.
chr10	54805955	HG2_Ill_GATKHCSBGrefine_7622	A	ACACTTTCAAGAATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_17066:HG2_PB_pbsv_11307:HG3_PB_assemblyticsfalcon_2820:HG2_Ill_breakscan11_4176:HG3_PB_pbsv_11030:HG2_Ill_MetaSV_560:HG2_Ill_GATKHCSBGrefine_7622:HG2_PB_SVrefine2PB10Xhap12_8241:HG3_Ill_MetaSV_533:HG3_Ill_GATKHCSBGrefine_7532:HG4_PB_SVrefine2Falcon1Dovetail_6858:HG2_PB_SVrefine2Falcon1plusDovetail_1279:HG3_PB_SVrefine2Falcon1Dovetail_6813:HG3_PB_SVrefine2PBcRDovetail_5281:HG2_PB_HySA_20446;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7622:HG2_Ill_MetaSV_560;NumExactMatchSVs=2;ClusterMaxShiftDist=0.140575;ClusterMaxSizeDiff=0.140575;ClusterMaxEditDist=0.2368;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=16251;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:54805956-54805970;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=583.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:48:0|1:31:3:1:57:1|0:0:7:19:0:0/1:21:11:0/1:7:36:.:.:.
chr10	55927541	HG4_Ill_GATKHCSBGrefine_7813	G	GCACCCCAACCTCTTATCTCTGTGTCCCAATCCCTTATTTCCACACCCCGACCTCTTATCTCTGCGCCCCAATCCCTTATTTCCA	20	PASS	ClusterIDs=HG4_PB_HySA_16477:HG4_Ill_scalpel_10402:HG4_Ill_GATKHC_18208:HG4_Ill_GATKHCSBGrefine_7813:HG4_Ill_150bpfermikitraw_14387:HG2_Ill_scalpel_10696:HG2_Ill_GATKHC_18169:HG2_Ill_GATKHCSBGrefine_7627:HG3_Ill_GATKHC_18078:HG3_Ill_GATKHCSBGrefine_7536:HG4_PB_pbsv_11330;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7627:HG2_Ill_GATKHC_18169:HG2_Ill_scalpel_10696:HG4_Ill_150bpfermikitraw_14387:HG4_Ill_GATKHCSBGrefine_7813:HG4_Ill_GATKHC_18208:HG4_Ill_scalpel_10402;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0348837;ClusterMaxSizeDiff=0.0232558;ClusterMaxEditDist=0.127907;PBcalls=2;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=84;DistBack=38;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=199;REFWIDENED=10:55927482-55927680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=584.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:21:0|1:14:2:1:15:./.:14:0:4:9:0/1:15:5:./.:.:.:.:.:.
chr10	55983284	HG3_PB_pbsv_11038	T	TTTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGACGGAGTCTCGCTCCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCTCCCAATAGCTGGGACTGTACAGCGCGCCCGCCACTACGCCCGGGCTATTTTTGAATTTTTATAGAGACGGGGTTTCACCGTTTTAGCCGGCATGGTCTCGCAATCTCCTGAGCACTCGTGATCCGCCCGCCTCGGCACTCCCAAAGTGCTGGGATTACAGGCGTGACCACCGCGCCCCGGCCCAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6817:HG2_PB_pbsv_11316:HG4_PB_pbsv_11331:HG3_PB_pbsv_11038:HG4_PB_SVrefine2Falcon1Dovetail_6862:HG2_PB_SVrefine2PBcRplusDovetail_1227:HG2_PB_assemblyticsPBcR_2767:HG2_PB_PB10Xdip_4438:HG2_PB_SVrefine2PB10Xhap12_8247:HG2_PB_HySA_20458:HG4_PB_HySA_16479:HG3_PB_assemblyticsfalcon_2830:HG2_Ill_breakscan11_4177:HG2_PB_SVrefine2Falcon1plusDovetail_1284:HG2_PB_SVrefine2Falcon2Bionano_5427;NumClusterSVs=15;ExactMatchIDs=HG3_PB_pbsv_11038;NumExactMatchSVs=1;ClusterMaxShiftDist=0.317355;ClusterMaxSizeDiff=0.317355;ClusterMaxEditDist=0.343802;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=343;DistBack=-11;DistForward=4;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=10:55983285-55983295;PctSeqSimilarity=0.9576;PctSizeSimilarity=0.965;PctRecOverlap=0.965;SizeDiff=12;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=96;MatchId=585.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:31:0|1:31:0:2:34:./.:29:0:2:1:0/1:26:8:0/1:5:15:.:.:.
chr10	56140311	HG2_PB_SVrefine2Falcon2Bionano_5429	C	CAATAGGCAGGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_20465:HG4_PB_pbsv_11334:HG3_PB_assemblyticsfalcon_2833:HG2_Ill_breakscan11_4178:HG4_Ill_GATKHCSBGrefine_7816:HG2_PB_SVrefine2Falcon2Bionano_5429:HG2_Ill_GATKHCSBGrefine_7629:HG4_PB_SVrefine2Falcon1Dovetail_6866:HG3_PB_SVrefine2Falcon1Dovetail_6819:HG4_PB_HySA_16484:HG2_PB_HySA_20466:HG2_PB_pbsv_11320;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5429:HG4_Ill_GATKHCSBGrefine_7816;NumExactMatchSVs=2;ClusterMaxShiftDist=0.109467;ClusterMaxSizeDiff=0.109467;ClusterMaxEditDist=0.19943;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=338;DistBack=4652;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=10:56140312-56140323;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=586.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:41:24:1|0:3:21:36:2:./.:27:0:1:2:0/1:25:16:0/1:10:61:.:.:.
chr10	56539248	HG2_PB_assemblyticsPBcR_2771	G	GTGTATATATACACACATATATGTGTGTATATATACACACATATATGTGTGTA	20	PASS	ClusterIDs=HG2_PB_HySA_20472:HG2_PB_pbsv_11322:HG4_Ill_scalpel_10411:HG4_PB_pbsv_11337:HG2_PB_PB10Xdip_4443:HG4_Ill_GATKHCSBGrefine_7819:HG2_PB_assemblyticsPBcR_2771:HG2_Ill_manta_3196:HG2_Ill_GATKHCSBGrefine_7631:HG3_PB_HySA_17083:HG4_Ill_GATKHC_18219:HG3_PB_pbsv_11044:HG2_Ill_GATKHC_18180:HG2_Ill_250bpfermikitraw_15137:HG4_PB_HySA_16488;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7631:HG2_Ill_manta_3196:HG2_PB_assemblyticsPBcR_2771:HG4_Ill_GATKHCSBGrefine_7819:HG4_Ill_scalpel_10411;NumExactMatchSVs=5;ClusterMaxShiftDist=0.163636;ClusterMaxSizeDiff=0.145455;ClusterMaxEditDist=0.283186;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=110;REFWIDENED=10:56539173-56539282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:6:30:1:20:./.:4:12:3:10:1/1:2:40:./.:.:.:.:.:.
chr10	56762358	HG4_Ill_GATKHCSBGrefine_7820	A	ACTAATCCTTGTGATGTTAAGTTACAGGGCTTTGAGTCATCTATCTAAGAAAAGGCACTGACTC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_14236:HG4_PB_pbsv_11339:HG2_PB_pbsv_11323:HG3_PB_pbsv_11046:HG2_PB_PB10Xdip_4444:HG2_Ill_breakscan11_4179:HG3_PB_assemblyticsfalcon_2839:HG2_PB_assemblyticsPBcR_2774:HG2_PB_HySA_20475:HG4_PB_SVrefine2Falcon1Dovetail_6869:HG4_Ill_svaba_14186:HG4_Ill_manta_2713:HG4_Ill_SVrefine2DISCOVARDovetail_8102:HG4_Ill_Krunchall_15763:HG4_Ill_GATKHC_18223:HG4_Ill_GATKHCSBGrefine_7820:HG4_Ill_Cortex_388:HG4_Ill_250bpfermikitraw_15031:HG4_Ill_150bpfermikitraw_14395:HG3_PB_SVrefine2PBcRDovetail_5289:HG3_PB_SVrefine2Falcon1Dovetail_6821:HG3_Ill_svaba_14268:HG3_Ill_manta_2598:HG3_Ill_Spiral_11819:HG3_Ill_SVrefine2DISCOVARDovetail_8304:HG3_Ill_Krunchall_15170:HG3_Ill_GATKHC_18088:HG3_Ill_GATKHCSBGrefine_7540:HG3_Ill_Cortex_401:HG3_Ill_250bpfermikitraw_14727:HG3_Ill_150bpfermikitraw_14266:HG2_PB_SVrefine2PBcRplusDovetail_1229:HG2_PB_SVrefine2PB10Xhap12_8248:HG2_PB_SVrefine2Falcon2Bionano_5430:HG2_PB_SVrefine2Falcon1plusDovetail_1286:HG2_Ill_svaba_14102:HG2_Ill_manta_3197:HG2_Ill_SpiralSDKrefine_1832:HG2_Ill_SVrefine2DISCOVARplusDovetail_1454:HG2_Ill_Krunchall_15468:HG2_Ill_GATKHC_18182:HG2_Ill_GATKHCSBGrefine_7632:HG2_Ill_Cortex_888:HG2_Ill_250bpfermikitraw_15139;NumClusterSVs=44;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14236:HG4_PB_SVrefine2Falcon1Dovetail_6869:HG4_Ill_svaba_14186:HG4_Ill_manta_2713:HG4_Ill_SVrefine2DISCOVARDovetail_8102:HG4_Ill_Krunchall_15763:HG4_Ill_GATKHC_18223:HG4_Ill_GATKHCSBGrefine_7820:HG4_Ill_Cortex_388:HG4_Ill_250bpfermikitraw_15031:HG4_Ill_150bpfermikitraw_14395:HG3_PB_SVrefine2PBcRDovetail_5289:HG3_PB_SVrefine2Falcon1Dovetail_6821:HG3_Ill_svaba_14268:HG3_Ill_manta_2598:HG3_Ill_Spiral_11819:HG3_Ill_SVrefine2DISCOVARDovetail_8304:HG3_Ill_Krunchall_15170:HG3_Ill_GATKHC_18088:HG3_Ill_GATKHCSBGrefine_7540:HG3_Ill_Cortex_401:HG3_Ill_250bpfermikitraw_14727:HG3_Ill_150bpfermikitraw_14266:HG2_PB_SVrefine2PBcRplusDovetail_1229:HG2_PB_SVrefine2PB10Xhap12_8248:HG2_PB_SVrefine2Falcon2Bionano_5430:HG2_PB_SVrefine2Falcon1plusDovetail_1286:HG2_Ill_svaba_14102:HG2_Ill_manta_3197:HG2_Ill_SpiralSDKrefine_1832:HG2_Ill_SVrefine2DISCOVARplusDovetail_1454:HG2_Ill_Krunchall_15468:HG2_Ill_GATKHC_18182:HG2_Ill_GATKHCSBGrefine_7632:HG2_Ill_Cortex_888:HG2_Ill_250bpfermikitraw_15139;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0775194;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.165414;PBcalls=14;Illcalls=30;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=29;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=63;DistBack=77999;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:56762359-56762360;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=588.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:0:24:0:18:1/1:0:32:1:31:1/1:0:41:./.:.:.:.:.:.
chr10	56902353	HG3_Ill_GATKHCSBGrefine_7541	A	ATACTACAGTTATTTTTTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_16491:HG3_PB_pbsv_11047:HG2_PB_pbsv_11324:HG2_Ill_breakscan11_4180:HG4_PB_pbsv_11340:HG2_PB_SVrefine2Falcon1plusDovetail_1287:HG3_Ill_MetaSV_538:HG3_Ill_GATKHCSBGrefine_7541:HG2_Ill_MetaSV_563:HG2_Ill_GATKHCSBGrefine_7633:HG4_Ill_manta_2714:HG4_Ill_MetaSV_574:HG4_Ill_GATKHCSBGrefine_7821:HG4_PB_SVrefine2Falcon1Dovetail_6870;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7633:HG2_Ill_MetaSV_563:HG3_Ill_GATKHCSBGrefine_7541:HG3_Ill_MetaSV_538;NumExactMatchSVs=4;ClusterMaxShiftDist=0.085758;ClusterMaxSizeDiff=0.0826953;ClusterMaxEditDist=0.242152;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=23044;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=10:56902354-56902378;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:25:0|1:34:0:4:26:1|0:0:9:24:0:0/1:26:17:0/1:6:21:.:.:.
chr10	57755783	HG4_Ill_GATKHCSBGrefine_7825	T	TATATATATATATATACATATATATATATATATATATATATACATATATATATATATATATATATATATAC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_14246:HG2_PB_pbsv_11331:HG4_Ill_GATKHC_18235:HG4_Ill_GATKHCSBGrefine_7825:HG2_Ill_GATKHC_18196;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14246:HG4_Ill_GATKHC_18235:HG4_Ill_GATKHCSBGrefine_7825:HG2_Ill_GATKHC_18196;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0428571;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.1;PBcalls=1;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=15;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=10:57755747-57755798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=590.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:37:1|0:7:32:45:2:./.:3:9:0:4:./.:2:11:./.:.:.:.:.:.
chr10	57974620	HG4_Ill_GATKHCSBGrefine_7826	T	TAAGAATTTTTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCAACCCCGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_11347:HG3_PB_assemblyticsfalcon_2852:HG2_PB_pbsv_11332:HG3_PB_pbsv_11055:HG3_PB_SVrefine2Falcon1Dovetail_6824:HG2_Ill_MetaSV_566:HG2_PB_SVrefine2PBcRplusDovetail_1233:HG2_PB_SVrefine2Falcon2Bionano_5433:HG2_10X_SVrefine210Xhap12_7950:HG4_Ill_MetaSV_577:HG4_Ill_GATKHCSBGrefine_7826:HG3_Ill_MetaSV_540:HG4_PB_SVrefine2Falcon1Dovetail_6873:HG3_PB_SVrefine2PBcRDovetail_5292:HG2_PB_SVrefine2Falcon1plusDovetail_1291:HG3_PB_HySA_17101:HG2_PB_HySA_20491:HG4_PB_HySA_16501:HG2_PB_PB10Xdip_4452:HG2_PB_HySA_20490;NumClusterSVs=20;ExactMatchIDs=HG3_Ill_MetaSV_540:HG4_Ill_GATKHCSBGrefine_7826:HG4_Ill_MetaSV_577;NumExactMatchSVs=3;ClusterMaxShiftDist=0.110236;ClusterMaxSizeDiff=0.110236;ClusterMaxEditDist=0.240122;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=313;DistBack=31968;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=10:57974621-57974632;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9812;PctRecOverlap=0.9812;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:18:1:26:1/1:0:7:0:10:1/1:0:15:1/1:2:53:.:.:.
chr10	58303224	HG3_Ill_GATKHC_18105	T	TTACAAATAATACATAATATTGTATACACATATAATATATAATAAATGTATGTACACATATAATATATACATATTGTATATATAATATATACGTATACATATTGTATACAATATGTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7951:HG2_PB_PB10Xdip_4453:HG2_PB_pbsv_11333:HG3_PB_HySA_17102:HG3_PB_pbsv_11056:HG2_Ill_breakscan11_4181:HG4_PB_pbsv_11348:HG4_Ill_svaba_14192:HG4_Ill_MetaSV_578:HG4_Ill_GATKHC_18240:HG4_Ill_GATKHCSBGrefine_7827:HG4_Ill_250bpfermikitraw_15046:HG4_Ill_150bpfermikitraw_14411:HG3_Ill_svaba_14276:HG3_Ill_MetaSV_541:HG3_Ill_GATKHC_18105:HG3_Ill_GATKHCSBGrefine_7546:HG3_Ill_250bpfermikitraw_14744:HG3_Ill_150bpfermikitraw_14281:HG2_Ill_svaba_14109:HG2_Ill_GATKHC_18201:HG2_Ill_GATKHCSBGrefine_7637:HG2_Ill_250bpfermikitraw_15156:HG2_Ill_150bpfermikitraw_14251:HG2_PB_HySA_20493:HG4_PB_SVrefine2Falcon1Dovetail_6874:HG4_Ill_SVrefine2DISCOVARDovetail_8111:HG3_PB_SVrefine2PBcRDovetail_5293:HG3_PB_SVrefine2Falcon1Dovetail_6825:HG3_Ill_SVrefine2DISCOVARDovetail_8313:HG2_PB_SVrefine2PBcRplusDovetail_1234:HG2_PB_SVrefine2Falcon2Bionano_5434:HG2_PB_SVrefine2Falcon1plusDovetail_1292:HG2_Ill_SVrefine2DISCOVARplusDovetail_1460;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14251:HG2_Ill_250bpfermikitraw_15156:HG2_Ill_GATKHCSBGrefine_7637:HG2_Ill_GATKHC_18201:HG2_Ill_svaba_14109:HG3_Ill_150bpfermikitraw_14281:HG3_Ill_250bpfermikitraw_14744:HG3_Ill_GATKHCSBGrefine_7546:HG3_Ill_GATKHC_18105:HG3_Ill_MetaSV_541:HG3_Ill_svaba_14276:HG4_Ill_150bpfermikitraw_14411:HG4_Ill_250bpfermikitraw_15046:HG4_Ill_GATKHCSBGrefine_7827:HG4_Ill_GATKHC_18240:HG4_Ill_MetaSV_578:HG4_Ill_svaba_14192;NumExactMatchSVs=17;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.10084;ClusterMaxEditDist=0.274678;PBcalls=12;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=116;DistBack=-109;DistForward=48;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=160;REFWIDENED=10:58303174-58303333;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:./.:0:1:0:0:1/1:0:18:0:27:1/1:0:35:./.:.:.:.:.:.
chr10	58679632	HG3_Ill_250bpfermikitraw_14749	T	TCAAAAAGAACAACAACAACAAAGTTTTGAGAATGAAAAGTAAAAAGTTGACTAAATTATAGTACTCCATAATAAACAATATAATGACTACAGGGATGTCCATTGATATCAAGAACCTAAGCAAACAAGAAATCTAAATGCCGAAAATAATCCTATATTTGGAACTAAATCAGAATTTTTATATATGTG	20	PASS	ClusterIDs=HG2_Ill_Spiral_786:HG2_PB_PB10Xdip_4455:HG2_PB_HySA_20496:HG3_Ill_svaba_14282:HG3_Ill_GATKHCSBGrefine_7548:HG3_Ill_250bpfermikitraw_14749:HG3_Ill_150bpfermikitraw_14287:HG2_Ill_svaba_14115:HG2_Ill_GATKHCSBGrefine_7639:HG3_PB_SVrefine2PBcRDovetail_5295:HG3_Ill_manta_2601:HG3_Ill_SVrefine2DISCOVARDovetail_8316:HG2_PB_SVrefine2Falcon1plusDovetail_1294:HG2_Ill_manta_3200:HG2_10X_SVrefine210Xhap12_7953:HG2_PB_SVrefine2PBcRplusDovetail_1236:HG2_PB_pbsv_11336:HG3_PB_pbsv_11060:HG3_Ill_MetaSV_542:HG2_Ill_MetaSV_567:HG3_Ill_Spiral_11835;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7639:HG2_Ill_svaba_14115:HG3_Ill_150bpfermikitraw_14287:HG3_Ill_250bpfermikitraw_14749:HG3_Ill_GATKHCSBGrefine_7548:HG3_Ill_svaba_14282;NumExactMatchSVs=6;ClusterMaxShiftDist=0.169399;ClusterMaxSizeDiff=0.163934;ClusterMaxEditDist=0.234973;PBcalls=7;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=188;DistBack=-1;DistForward=10299;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:58679633-58679634;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=593.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:35:0|1:16:0:1:35:1|0:0:29:19:0:0/1:25:7:./.:.:.:.:.:.
chr10	59457949	HG2_Ill_Cortex_902	T	TCAAAAAAGTTAAACACACGACTCTCATACAAATAAAAAGTTAGCAGATGTCAAAGATTTATAAAACTTACTAATGAGAGAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_4468:HG4_PB_pbsv_11355:HG2_PB_pbsv_11340:HG2_PB_HySA_20505:HG4_Ill_manta_2717:HG4_Ill_Krunchall_15788:HG4_Ill_GATKHCSBGrefine_7845:HG4_Ill_Cortex_392:HG4_Ill_250bpfermikitraw_15057:HG4_Ill_150bpfermikitraw_14423:HG2_Ill_manta_3202:HG2_Ill_Krunchall_15490:HG2_Ill_GATKHCSBGrefine_7655:HG2_Ill_Cortex_902:HG2_Ill_150bpfermikitraw_14260:HG2_PB_PB10Xdip_4469;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14260:HG2_Ill_Cortex_902:HG2_Ill_GATKHCSBGrefine_7655:HG2_Ill_Krunchall_15490:HG2_Ill_manta_3202:HG4_Ill_150bpfermikitraw_14423:HG4_Ill_250bpfermikitraw_15057:HG4_Ill_Cortex_392:HG4_Ill_GATKHCSBGrefine_7845:HG4_Ill_Krunchall_15788:HG4_Ill_manta_2717;NumExactMatchSVs=11;ClusterMaxShiftDist=0.124224;ClusterMaxSizeDiff=0.111801;ClusterMaxEditDist=0.173913;PBcalls=5;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=81;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=10:59457950-59457952;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=594.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:0|1:28:1:4:25:0|1:23:0:0:20:0/1:15:11:./.:.:.:.:.:.
chr10	59611402	HG4_Ill_Krunchall_15790	A	ATATATATATTCTATATATATATTCTCTATATATATTCTATATATATATTCTC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_15167:HG2_PB_pbsv_11341:HG4_PB_HySA_16511:HG2_PB_HySA_20507:HG2_PB_PB10Xdip_4470:HG2_PB_PB10Xdip_4471:HG4_Ill_Krunchall_15790:HG4_Ill_GATKHC_18256:HG4_Ill_250bpfermikitraw_15059;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15167:HG4_Ill_Krunchall_15790:HG4_Ill_GATKHC_18256:HG4_Ill_250bpfermikitraw_15059;NumExactMatchSVs=4;ClusterMaxShiftDist=0.190476;ClusterMaxSizeDiff=0.171429;ClusterMaxEditDist=0.266667;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=29;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=92;REFWIDENED=10:59611401-59611495;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:26:./.:8:18:8:2:./.:6:0:3:2:0/1:20:14:./.:.:.:.:.:.
chr10	59927927	HG2_Ill_svaba_14127	G	GTATATATGTATGTATGTATATGTATATATATATGTATGTGTATATATATGTATATGTATATGTATATGTA	20	PASS	ClusterIDs=HG4_PB_pbsv_11357:HG2_PB_pbsv_11342:HG3_PB_HySA_17117:HG3_PB_pbsv_11067:HG2_Ill_breakscan11_4183:HG4_Ill_svaba_14206:HG4_Ill_manta_2718:HG4_Ill_Krunchall_15794:HG4_Ill_GATKHC_18259:HG4_Ill_GATKHCSBGrefine_7846:HG4_Ill_250bpfermikitraw_15064:HG4_Ill_150bpfermikitraw_14429:HG3_Ill_svaba_14287:HG3_Ill_Spiral_11842:HG3_Ill_Krunchall_15198:HG3_Ill_GATKHC_18120:HG3_Ill_GATKHCSBGrefine_7566:HG3_Ill_250bpfermikitraw_14755:HG3_Ill_150bpfermikitraw_14295:HG2_Ill_svaba_14127:HG2_Ill_manta_3203:HG2_Ill_SpiralSDKrefine_1853:HG2_Ill_Krunchall_15495:HG2_Ill_GATKHC_18219:HG2_Ill_GATKHCSBGrefine_7656:HG2_Ill_250bpfermikitraw_15171:HG2_Ill_150bpfermikitraw_14266:HG2_PB_assemblyticsfalcon_2891:HG3_PB_assemblyticsfalcon_2876;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14266:HG2_Ill_250bpfermikitraw_15171:HG2_Ill_GATKHCSBGrefine_7656:HG2_Ill_GATKHC_18219:HG2_Ill_Krunchall_15495:HG2_Ill_SpiralSDKrefine_1853:HG2_Ill_manta_3203:HG2_Ill_svaba_14127:HG3_Ill_150bpfermikitraw_14295:HG3_Ill_250bpfermikitraw_14755:HG3_Ill_GATKHCSBGrefine_7566:HG3_Ill_GATKHC_18120:HG3_Ill_Krunchall_15198:HG3_Ill_Spiral_11842:HG3_Ill_svaba_14287:HG4_Ill_150bpfermikitraw_14429:HG4_Ill_250bpfermikitraw_15064:HG4_Ill_GATKHCSBGrefine_7846:HG4_Ill_GATKHC_18259:HG4_Ill_Krunchall_15794:HG4_Ill_manta_2718:HG4_Ill_svaba_14206;NumExactMatchSVs=22;ClusterMaxShiftDist=0.185714;ClusterMaxSizeDiff=0.169014;ClusterMaxEditDist=0.3;PBcalls=6;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=13;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=10:59927914-59927942;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=596.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:34:0|1:18:1:2:34:0|1:28:0:0:20:0/1:26:28:./.:.:.:.:.:.
chr10	60984903	HG2_PB_SVrefine2PBcRplusDovetail_1238	T	TAAGAAATGAAAATAGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_17123:HG2_PB_pbsv_11343:HG4_PB_pbsv_11358:HG3_PB_assemblyticsfalcon_2883:HG2_PB_assemblyticsfalcon_2896:HG2_PB_HySA_20513:HG2_Ill_breakscan11_4184:HG2_10X_SVrefine210Xhap12_7958:HG4_PB_SVrefine2Falcon1Dovetail_6881:HG2_PB_SVrefine2PBcRplusDovetail_1238:HG2_PB_SVrefine2Falcon2Bionano_5436:HG3_PB_SVrefine2PBcRDovetail_5299:HG2_PB_SVrefine2PB10Xhap12_8253:HG3_PB_SVrefine2Falcon1Dovetail_6833:HG2_PB_SVrefine2Falcon1plusDovetail_1296:HG4_Ill_MetaSV_583:HG2_PB_PB10Xdip_4475:HG2_PB_PB10Xdip_4474:HG4_PB_HySA_16523;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5436:HG2_PB_SVrefine2PBcRplusDovetail_1238:HG4_PB_SVrefine2Falcon1Dovetail_6881;NumExactMatchSVs=3;ClusterMaxShiftDist=0.166163;ClusterMaxSizeDiff=0.166163;ClusterMaxEditDist=0.260465;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=331;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=10:60984904-60984921;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=597.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:76:./.:0:2:0:0:./.:0:4:0:3:1/1:0:20:1/1:2:61:.:.:.
chr10	62234975	HG4_PB_SVrefine2Falcon1Dovetail_6888	T	TAAAAGCAAATGGATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4185:HG2_PB_pbsv_11349:HG2_PB_assemblyticsfalcon_2911:HG2_PB_HySA_20531:HG2_PB_SVrefine2Falcon1plusDovetail_1301:HG4_PB_SVrefine2Falcon1Dovetail_6888:HG4_PB_pbsv_11365:HG4_PB_HySA_16541;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_6888;NumExactMatchSVs=1;ClusterMaxShiftDist=0.131195;ClusterMaxSizeDiff=0.131195;ClusterMaxEditDist=0.217822;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=340;DistBack=5557;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:62234976-62234990;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9913;PctRecOverlap=0.9942;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=598.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:32:1|0:3:30:33:0:0|1:19:0:0:6:0/1:31:9:0/1:7:26:.:1757:.
chr10	62304779	HG2_Ill_MetaSV_571	T	TCTTGTAACAAACGCTTGTTTGTTACAAGTTACAAGGTTGATATATCAATATATATGATATGATATTAATATATCATATTAATATCATTAATATCATTAATAATATATTAATATATCAACCTTGTAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_4499:HG4_PB_pbsv_11366:HG3_PB_pbsv_11074:HG2_PB_assemblyticsfalcon_2912:HG2_PB_assemblyticsPBcR_2827:HG4_PB_assemblyticsfalcon_2814:HG3_PB_assemblyticsfalcon_2898:HG3_Ill_manta_2608:HG3_Ill_Spiral_11858:HG3_Ill_SVrefine2DISCOVARDovetail_8329:HG3_Ill_MetaSV_550:HG3_Ill_GATKHCSBGrefine_7575:HG2_PB_pbsv_11350:HG4_PB_SVrefine2Falcon1Dovetail_6889:HG4_Ill_manta_2721:HG4_Ill_MetaSV_587:HG4_Ill_GATKHCSBGrefine_7853:HG3_PB_SVrefine2PBcRDovetail_5303:HG3_PB_SVrefine2Falcon1Dovetail_6840:HG3_Ill_GATKHCSBGrefine_7574:HG2_PB_SVrefine2PB10Xhap12_8261:HG2_Ill_manta_3208:HG2_Ill_MetaSV_571:HG4_Ill_SVrefine2DISCOVARDovetail_8129:HG2_PB_SVrefine2Falcon2Bionano_5440:HG2_Ill_SpiralSDKrefine_1866:HG2_Ill_SVrefine2DISCOVARplusDovetail_1478:HG2_Ill_GATKHCSBGrefine_7666:HG2_10X_SVrefine210Xhap12_7965:HG2_PB_SVrefine2PBcRplusDovetail_1245:HG2_PB_SVrefine2Falcon1plusDovetail_1302:HG2_PB_PB10Xdip_4500;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_MetaSV_571:HG2_Ill_manta_3208:HG2_PB_SVrefine2PB10Xhap12_8261:HG3_Ill_GATKHCSBGrefine_7574:HG3_PB_SVrefine2Falcon1Dovetail_6840:HG3_PB_SVrefine2PBcRDovetail_5303:HG4_Ill_GATKHCSBGrefine_7853:HG4_Ill_MetaSV_587:HG4_Ill_manta_2721:HG4_PB_SVrefine2Falcon1Dovetail_6889;NumExactMatchSVs=10;ClusterMaxShiftDist=0.104839;ClusterMaxSizeDiff=0.0967742;ClusterMaxEditDist=0.26087;PBcalls=16;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=126;DistBack=42977;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:62304780-62304794;PctSeqSimilarity=0.996;PctSizeSimilarity=0.9921;PctRecOverlap=0.9843;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=599.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:23:0:36:./.:5:37:8:25:./.:4:43:./.:.:.:.:.:.
chr10	64130425	HG2_PB_SVrefine2PB10Xhap12_8265	C	CATATATATCATATATATACCATATATATCATATATACCATATATATCATATATATACCATATATATCATATATAACATATATATCATATATATACCATATATATAATATATATCATATAAATCATATATATCATATACATCATATACATCATATACATCATATACATCATATATGATATATACATCATATATCACACATATGATATATACATCATATATCACACATATGATATACATCATATATCACACATATGATATACATCATATATCACACATATGATATACATCATATATCACACATATGATATACATCATATATCACACATATGATATACATCATATATCACACATATGATATATATCATATATCACACATATGATATATATCATATATCACACATATATATATATCATATATCACACATATGATATATATCATAATATCACATATATCATATATATCATATATATCACATATATCATATATATCATATATATCACATATATGATATATATATCATATATATCACATATATGATATATATCATATATATCACATATATATATATATCATATATATCACATATATGATATATATATCATATATATCACATATATGATATATATATCATATATATCACATATATGATATATATATCATATATATCACATATATCATATATATCACATATATCATATATCATATATATCATATATATCACATACATGATATATATCATATGTGATATATATCATATATATCATATGTGATATATATCATATGTGATATATAGCATATATATCATATGTGATATATATCATATGTGATATATATCATATGTGATATATATGGTATATATGATACATATGACATATATCATATGTGATATATATGATACATATGACATATATCATATGTGATACATATGACATATATCATATGTGATACATATGACATATATCATATGTGATACATATGACATATATCATATGTGATACATATGACATATATCATATGTGATACATATGACATATATCATATGTGATATATGTCACATATATCATATGTGATATATGTCACATATATCATATGTGATATATGTCACATATATCACATGTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6890:HG3_PB_pbsv_11079:HG2_PB_SVrefine2PB10Xhap12_8265:HG2_PB_SVrefine2PBcRplusDovetail_1248:HG3_PB_pbsv_11080:HG3_PB_SVrefine2Falcon1Dovetail_6842:HG2_PB_SVrefine2Falcon1plusDovetail_1304:HG2_PB_SVrefine2Falcon2Bionano_5445:HG3_Ill_SVrefine2DISCOVARDovetail_8341:HG2_PB_SVrefine2PB10Xhap12_8264;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8265;NumExactMatchSVs=1;ClusterMaxShiftDist=0.184362;ClusterMaxSizeDiff=0.171193;ClusterMaxEditDist=0.26488;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=1120;DistBack=208;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=647;REFWIDENED=10:64130426-64131072;PctSeqSimilarity=0.928;PctSizeSimilarity=0.9116;PctRecOverlap=0.8091;SizeDiff=99;StartDistance=-164;EndDistance=-164;GTMatch=1;TruScore=88;MatchId=600.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:80:1/1:1:32:1:19:./.:0:0:0:0:1/1:0:12:1/1:6:170:.:1417:.
chr10	64688669	HG2_Ill_Krunchall_15533	T	TCCTCACATCCCAGACGGGGCGGCCGGGCAGAGGCGCTCCCCACTTCCCAGACAGGGTGGCGGCCGGGCAGAGGCGCTCC	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7671:HG4_PB_pbsv_11374:HG4_Ill_scalpel_10461:HG4_Ill_GATKHC_18288:HG4_Ill_GATKHCSBGrefine_7860:HG3_Ill_scalpel_10895:HG3_Ill_GATKHCSBGrefine_7581:HG2_Ill_scalpel_10746:HG2_Ill_Krunchall_15533:HG2_Ill_GATKHC_18250;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7671:HG4_Ill_scalpel_10461:HG4_Ill_GATKHC_18288:HG4_Ill_GATKHCSBGrefine_7860:HG3_Ill_scalpel_10895:HG3_Ill_GATKHCSBGrefine_7581:HG2_Ill_scalpel_10746:HG2_Ill_Krunchall_15533:HG2_Ill_GATKHC_18250;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0493827;ClusterMaxSizeDiff=0.0246914;ClusterMaxEditDist=0.160494;PBcalls=1;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=79;DistBack=21;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=10:64688668-64688672;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:23:./.:0:15:13:10:./.:2:19:1:8:1/1:1:16:./.:.:.:.:.:.
chr10	65542832	HG3_PB_SVrefine2PBcRDovetail_5306	C	CAGAAATTGTGGTGAGCTGTGATCACACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACCCTATTTTTCTGTCTCAAAAAAAAAATGGATCAACCATTTGAACCAAGGATCAACCCATAGACTGGTCACCGAGTAGAGAGAAAGCTGGGAAAAGACAAAAGAAGATGCTAAATATAGACAGCACAATATCACGGAACCAATAGAAGTTAGAGTTTGAAGACTGAGTAGTCAGGCTCTGTTAGTACTTGGGGAGAGTGAATGATATTGGGGTGAGAAAACAGAACAGAGCCTGTTCTGAGCCCCATCTCAGGACCCTTAAATTAATCAAGTCTGAATTAGAGTGAACACCTGATAAATGATGGTTTTCCTTTGGAAAGCATGTTTACTAATAGGAAATAAGTTCCTGTAATTAAGTGTTCTCAGAATTTTGAAGTTGCACAGCATCTATAGAATGCATTCTCAGAAGACCTAGACTGAGATTCAATTTAGTAAATTTGGTTACATGGAAATTAAATGAGCACTATTCAAAGGATTTTCCAGACCTTTTTTTGATGCTACTTTTAGTTTTCTTCACCAAGGTCCTCACAGAAAAGGTCATTTGGACCTTGAAAGTGAAGAGCTTGGTAGTCATTGACCAAAAATAAAACCCAGACACCCTGGTGAATTATGCATGCTGAGAAAGCTAACTTCGCCATATTTTACAATACACATCGCACTCCTATTGCATTTTGAGAATAATGCTAGACCCTGTAGGGAGTACAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4186:HG3_PB_pbsv_11083:HG2_PB_pbsv_11357:HG4_PB_pbsv_11375:HG2_PB_assemblyticsfalcon_2922:HG4_PB_HySA_16556:HG4_Ill_SVrefine2DISCOVARDovetail_8139:HG4_Ill_MetaSV_589:HG4_Ill_GATKHCSBGrefine_7861:HG3_PB_SVrefine2PBcRDovetail_5306:HG3_Ill_SVrefine2DISCOVARDovetail_8348:HG3_Ill_MetaSV_552:HG3_Ill_GATKHCSBGrefine_7582:HG2_PB_SVrefine2PBcRplusDovetail_1249:HG2_PB_SVrefine2PB10Xhap12_8266:HG2_PB_SVrefine2Falcon2Bionano_5446:HG2_PB_SVrefine2Falcon1plusDovetail_1305:HG2_Ill_SVrefine2DISCOVARplusDovetail_1483:HG2_Ill_MetaSV_573:HG2_Ill_GATKHCSBGrefine_7672:HG2_10X_SVrefine210Xhap12_7969:HG4_PB_SVrefine2Falcon1Dovetail_6891:HG3_PB_SVrefine2Falcon1Dovetail_6844:HG2_PB_PB10Xdip_4534;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7969:HG2_Ill_GATKHCSBGrefine_7672:HG2_Ill_MetaSV_573:HG2_Ill_SVrefine2DISCOVARplusDovetail_1483:HG2_PB_SVrefine2Falcon1plusDovetail_1305:HG2_PB_SVrefine2Falcon2Bionano_5446:HG2_PB_SVrefine2PB10Xhap12_8266:HG2_PB_SVrefine2PBcRplusDovetail_1249:HG3_Ill_GATKHCSBGrefine_7582:HG3_Ill_MetaSV_552:HG3_Ill_SVrefine2DISCOVARDovetail_8348:HG3_PB_SVrefine2PBcRDovetail_5306:HG4_Ill_GATKHCSBGrefine_7861:HG4_Ill_MetaSV_589:HG4_Ill_SVrefine2DISCOVARDovetail_8139;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0463023;ClusterMaxSizeDiff=0.0463023;ClusterMaxEditDist=0.195556;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=763;DistBack=101315;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=10:65542833-65542836;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=602.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:90:./.:0:0:0:0:./.:0:8:0:4:1/1:0:26:./.:6:100:.:.:.
chr10	66503259	HG2_Ill_MetaSV_574	C	CAAAAATTTTGGATTCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_11381:HG2_PB_assemblyticsfalcon_2929:HG2_PB_pbsv_11364:HG4_PB_SVrefine2Falcon1Dovetail_6895:HG3_PB_SVrefine2Falcon1Dovetail_6848:HG2_Ill_MetaSV_574:HG2_PB_SVrefine2Falcon2Bionano_5449:HG2_PB_SVrefine2Falcon1plusDovetail_1308:HG2_PB_HySA_20565;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_MetaSV_574;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0809249;ClusterMaxSizeDiff=0.0809249;ClusterMaxEditDist=0.159441;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=342;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=10:66503260-66503275;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9942;PctRecOverlap=0.9942;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:49:./.:30:16:17:26:./.:1:6:20:0:0/1:38:7:0/1:12:28:.:.:.
chr10	66837054	HG3_PB_SVrefine2Falcon1Dovetail_6849	T	TTCAATGAGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4187:HG3_PB_pbsv_11090:HG2_PB_HySA_20569:HG4_PB_pbsv_11382:HG2_PB_HySA_20568:HG2_PB_assemblyticsfalcon_2931:HG2_PB_pbsv_11365:HG4_PB_HySA_16573:HG4_PB_SVrefine2Falcon1Dovetail_6896:HG3_PB_SVrefine2Falcon1Dovetail_6849:HG2_PB_SVrefine2Falcon2Bionano_5450:HG2_PB_SVrefine2Falcon1plusDovetail_1309;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5450:HG3_PB_SVrefine2Falcon1Dovetail_6849:HG4_PB_SVrefine2Falcon1Dovetail_6896;NumExactMatchSVs=3;ClusterMaxShiftDist=0.14897;ClusterMaxSizeDiff=0.14897;ClusterMaxEditDist=0.2187;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:66837055-66837069;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=604.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:34:0|1:31:2:4:32:1|0:0:10:30:0:0/1:22:6:0/1:11:26:.:.:.
chr10	67196549	HG2_PB_pbsv_11370	T	TGTTCTGGGCCCGGGCGCGGGGCTCACGGCCTGTAATCCCAGCACTTTGCCGGGACGCCGAGGCGGGTGGATATGAGGTCAGGAGATCGGAGACCATCCTGGCTAACAAGGTGAACCCGTCTCTACTAAAAATACAAAAAATTAGCCGGCCGTGGCGGGCGCCTGTAGTCCAGCTACTCGGAGGCTTGAGGCAGGAGAATGGCTGTGAACCGGCCGCAAGCGGAGCTCTGCAGTGAGCCCGAGATTGGCGCCAACTGCAGTCCGCAGTCCGGCCTGGGCGAAACAGAGCGAGACTCCGTCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTTA	20	PASS	ClusterIDs=HG4_PB_HySA_16576:HG3_PB_pbsv_11096:HG2_Ill_breakscan11_4188:HG2_PB_pbsv_11370:HG2_PB_assemblyticsfalcon_2934:HG2_Ill_MetaSV_578:HG3_Ill_MetaSV_559:HG2_PB_SVrefine2Falcon1plusDovetail_1314:HG4_Ill_MetaSV_593:HG4_PB_pbsv_11386;NumClusterSVs=10;ExactMatchIDs=HG2_PB_pbsv_11370;NumExactMatchSVs=1;ClusterMaxShiftDist=0.119318;ClusterMaxSizeDiff=0.119318;ClusterMaxEditDist=0.3101;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=365;DistBack=11346;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=10:67196550-67196549;PctSeqSimilarity=0.9518;PctSizeSimilarity=0.9753;PctRecOverlap=0.9562;SizeDiff=9;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=96;MatchId=605.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:18:1|0:0:11:40:1:./.:28:0:2:4:0/1:31:10:0/1:8:11:.:.:.
chr10	68326813	HG2_Ill_GATKHCSBGrefine_7684	A	AGAGGGATGGGAGGGGAAGGAGAAAGAAGGAAGGAAGGGAGGGAGGGAGGGAGGAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5455:HG3_PB_assemblyticsfalcon_2932:HG4_PB_pbsv_11390:HG2_PB_PB10Xdip_4568:HG2_PB_HySA_20581:HG4_PB_HySA_16587:HG3_PB_HySA_17173:HG4_Ill_GATKHC_18322:HG4_Ill_GATKHCSBGrefine_7869:HG3_Ill_scalpel_10927:HG3_Ill_Krunchall_15264:HG3_Ill_GATKHC_18191:HG3_Ill_GATKHCSBGrefine_7592:HG3_Ill_250bpfermikitraw_14810:HG2_Ill_scalpel_10771:HG2_Ill_GATKHC_18293:HG2_Ill_GATKHCSBGrefine_7684:HG4_Ill_svaba_14264:HG4_Ill_scalpel_10481:HG3_Ill_svaba_14349:HG2_Ill_svaba_14192:HG2_Ill_manta_3215:HG2_Ill_Krunchall_15569:HG2_Ill_250bpfermikitraw_15238:HG2_Ill_breakscan11_4189:HG2_PB_pbsv_11374:HG4_Ill_SVrefine2DISCOVARDovetail_8150:HG2_Ill_SVrefine2DISCOVARplusDovetail_1494:HG3_PB_SVrefine2PBcRDovetail_5317:HG3_Ill_SVrefine2DISCOVARDovetail_8357;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7684:HG2_Ill_GATKHC_18293:HG2_Ill_scalpel_10771:HG3_Ill_250bpfermikitraw_14810:HG3_Ill_GATKHCSBGrefine_7592:HG3_Ill_GATKHC_18191:HG3_Ill_Krunchall_15264:HG3_Ill_scalpel_10927:HG4_Ill_GATKHCSBGrefine_7869:HG4_Ill_GATKHC_18322;NumExactMatchSVs=10;ClusterMaxShiftDist=0.104348;ClusterMaxSizeDiff=0.103448;ClusterMaxEditDist=0.206897;PBcalls=9;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=0;DistForward=3;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=10:68326790-68326818;PctSeqSimilarity=0.9655;PctSizeSimilarity=0.9322;PctRecOverlap=0.9322;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=606.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:51:1/1:4:21:4:26:./.:1:19:1:16:1/1:0:15:./.:.:.:.:.:.
chr10	68336758	HG2_PB_SVrefine2Falcon1plusDovetail_1317	T	TCTTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCGCGCCCGGCTAATTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCGGCC	10	PASS	ClusterIDs=HG2_PB_HySA_20582:HG2_PB_pbsv_11375:HG2_PB_assemblyticsfalcon_2948:HG4_PB_pbsv_11391:HG2_PB_SVrefine2Falcon1plusDovetail_1317:HG4_PB_SVrefine2Falcon1Dovetail_6901:HG4_PB_HySA_16588;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1317;NumExactMatchSVs=1;ClusterMaxShiftDist=0.14497;ClusterMaxSizeDiff=0.14497;ClusterMaxEditDist=0.222543;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=328;DistBack=2;DistForward=10;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=10:68336759-68336769;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9939;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:36:1|0:1:35:50:0:./.:0:3:23:0:0/1:31:14:0/1:12:35:.:.:.
chr10	69486468	HG4_Ill_scalpel_10490	A	ATATATCATATATATGATATACGATATATTATATATAATTATAATATATCATATAAATATAATATATATTATATATAATATATCG	20	PASS	ClusterIDs=HG2_PB_HySA_20593:HG4_PB_pbsv_11393:HG2_PB_pbsv_11378:HG2_PB_PB10Xdip_4571:HG3_PB_pbsv_11103:HG2_Ill_breakscan11_4190:HG4_Ill_svaba_14269:HG4_Ill_scalpel_10490:HG4_Ill_GATKHC_18331:HG4_Ill_GATKHCSBGrefine_7871:HG4_Ill_150bpfermikitraw_14496:HG3_Ill_svaba_14356:HG3_Ill_GATKHC_18199:HG3_Ill_GATKHCSBGrefine_7593:HG2_PB_assemblyticsfalcon_2955:HG2_Ill_svaba_14199:HG2_Ill_SpiralSDKrefine_1903:HG2_Ill_GATKHC_18304:HG2_Ill_GATKHCSBGrefine_7686:HG4_PB_HySA_16599;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7686:HG2_Ill_GATKHC_18304:HG2_Ill_SpiralSDKrefine_1903:HG2_Ill_svaba_14199:HG2_PB_assemblyticsfalcon_2955:HG3_Ill_GATKHCSBGrefine_7593:HG3_Ill_GATKHC_18199:HG3_Ill_svaba_14356:HG4_Ill_150bpfermikitraw_14496:HG4_Ill_GATKHCSBGrefine_7871:HG4_Ill_GATKHC_18331:HG4_Ill_scalpel_10490:HG4_Ill_svaba_14269;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.244186;PBcalls=7;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=-1;DistForward=85352;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=12;REFWIDENED=10:69486467-69486481;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=608.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:52:1/1:1:23:1:11:./.:0:4:0:6:1/1:0:16:./.:.:.:.:.:.
chr10	69585413	HG4_Ill_manta_2727	A	ATTAATGAAACTAACTTAGCTCCTGTTCGATAAATTAAATCTCAAGCAACTCAGCTGAATTCTGTCATAAGATTCATGGTAGAAACATATTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7983:HG2_PB_PB10Xdip_4572:HG3_PB_pbsv_11104:HG2_Ill_breakscan11_4191:HG2_PB_pbsv_11379:HG3_PB_assemblyticsfalcon_2940:HG2_PB_assemblyticsfalcon_2957:HG4_PB_pbsv_11394:HG4_PB_SVrefine2PBcRDovetail_5692:HG4_PB_SVrefine2Falcon1Dovetail_6902:HG4_Ill_svaba_14270:HG4_Ill_manta_2727:HG4_Ill_SVrefine2DISCOVARDovetail_8153:HG4_Ill_Krunchall_15861:HG4_Ill_GATKHC_18332:HG4_Ill_GATKHCSBGrefine_7872:HG4_Ill_Cortex_406:HG4_Ill_250bpfermikitraw_15129:HG4_Ill_150bpfermikitraw_14497:HG3_PB_SVrefine2PBcRDovetail_5318:HG3_PB_SVrefine2Falcon1Dovetail_6858:HG3_Ill_svaba_14357:HG3_Ill_manta_2617:HG3_Ill_Spiral_11903:HG3_Ill_SVrefine2DISCOVARDovetail_8362:HG3_Ill_Krunchall_15269:HG3_Ill_GATKHCSBGrefine_7594:HG3_Ill_Cortex_421:HG3_Ill_250bpfermikitraw_14815:HG3_Ill_150bpfermikitraw_14359:HG2_PB_SVrefine2PBcRplusDovetail_1258:HG2_PB_SVrefine2PB10Xhap12_8275:HG2_PB_SVrefine2Falcon2Bionano_5457:HG2_PB_SVrefine2Falcon1plusDovetail_1318:HG2_Ill_svaba_14200:HG2_Ill_manta_3217:HG2_Ill_SpiralSDKrefine_1904:HG2_Ill_SVrefine2DISCOVARplusDovetail_1499:HG2_Ill_Krunchall_15577:HG2_Ill_GATKHCSBGrefine_7687:HG2_Ill_Cortex_952:HG2_Ill_250bpfermikitraw_15245:HG2_Ill_150bpfermikitraw_14334;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7983:HG4_PB_SVrefine2PBcRDovetail_5692:HG4_PB_SVrefine2Falcon1Dovetail_6902:HG4_Ill_svaba_14270:HG4_Ill_manta_2727:HG4_Ill_SVrefine2DISCOVARDovetail_8153:HG4_Ill_Krunchall_15861:HG4_Ill_GATKHC_18332:HG4_Ill_GATKHCSBGrefine_7872:HG4_Ill_Cortex_406:HG4_Ill_250bpfermikitraw_15129:HG4_Ill_150bpfermikitraw_14497:HG3_PB_SVrefine2PBcRDovetail_5318:HG3_PB_SVrefine2Falcon1Dovetail_6858:HG3_Ill_svaba_14357:HG3_Ill_manta_2617:HG3_Ill_Spiral_11903:HG3_Ill_SVrefine2DISCOVARDovetail_8362:HG3_Ill_Krunchall_15269:HG3_Ill_GATKHCSBGrefine_7594:HG3_Ill_Cortex_421:HG3_Ill_250bpfermikitraw_14815:HG3_Ill_150bpfermikitraw_14359:HG2_PB_SVrefine2PBcRplusDovetail_1258:HG2_PB_SVrefine2PB10Xhap12_8275:HG2_PB_SVrefine2Falcon2Bionano_5457:HG2_PB_SVrefine2Falcon1plusDovetail_1318:HG2_Ill_svaba_14200:HG2_Ill_manta_3217:HG2_Ill_SpiralSDKrefine_1904:HG2_Ill_SVrefine2DISCOVARplusDovetail_1499:HG2_Ill_Krunchall_15577:HG2_Ill_GATKHCSBGrefine_7687:HG2_Ill_Cortex_952:HG2_Ill_250bpfermikitraw_15245:HG2_Ill_150bpfermikitraw_14334;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0765027;ClusterMaxEditDist=0.212766;PBcalls=14;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=91;DistBack=5875;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=10:69585414-69585416;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=609.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:2:36:1:6:./.:0:0:1:27:1/1:1:46:./.:.:.:.:.:.
chr10	69609055	HG2_PB_SVrefine2PBcRplusDovetail_1259	G	GGGGACGAGAAGAGGGAGAGGGGAGGGGAGAGGGGACAAGAAGAGGGAGAGGGGAGGGGAGGGGGGACGAGAAGAGGGGGAGGGGAGGGGAGGGAGAGAGGAGGGGAGGGGAGGGGAGTAGAGAGGAGGAGAGGAGAGAGGAGGAGAGGAGAGGAGAGGAGAAGAAGAGAAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA	20	PASS	ClusterIDs=HG3_PB_pbsv_11105:HG2_PB_SVrefine2Falcon2Bionano_5458:HG3_PB_assemblyticsfalcon_2942:HG2_PB_assemblyticsfalcon_2959:HG2_PB_HySA_20597:HG3_PB_HySA_17181:HG4_PB_SVrefine2Falcon1Dovetail_6903:HG4_PB_SVrefine2PBcRDovetail_5693:HG2_PB_SVrefine2PBcRplusDovetail_1259:HG2_PB_SVrefine2PB10Xhap12_8276:HG3_PB_SVrefine2PBcRDovetail_5319:HG2_PB_PB10Xdip_4573:HG2_PB_SVrefine2Falcon1plusDovetail_1319:HG3_PB_SVrefine2Falcon1Dovetail_6859:HG4_PB_HySA_16603:HG4_PB_pbsv_11395:HG2_PB_pbsv_11380:HG2_10X_SVrefine210Xhap12_7985;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_1259:HG4_PB_SVrefine2PBcRDovetail_5693;NumExactMatchSVs=2;ClusterMaxShiftDist=0.179669;ClusterMaxSizeDiff=0.179669;ClusterMaxEditDist=0.381643;PBcalls=17;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=223;DistBack=6631;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=10:69609056-69609068;PctSeqSimilarity=0.9841;PctSizeSimilarity=0.9686;PctRecOverlap=0.9731;SizeDiff=7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=610.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:41:1/1:0:11:1:11:./.:0:0:0:14:1/1:0:12:./.:.:.:.:.:.
chr10	69994890	HG3_PB_SVrefine2Falcon1Dovetail_6860	T	TAGAATTAGCAATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_11383:HG3_PB_pbsv_11107:HG3_PB_assemblyticsfalcon_2944:HG4_PB_pbsv_11397:HG2_PB_HySA_20603:HG2_PB_SVrefine2Falcon2Bionano_5459:HG4_PB_SVrefine2PBcRDovetail_5694:HG4_PB_SVrefine2Falcon1Dovetail_6904:HG4_Ill_GATKHCSBGrefine_7874:HG3_PB_SVrefine2Falcon1Dovetail_6860:HG3_PB_SVrefine2PBcRDovetail_5320:HG3_PB_HySA_17185:HG2_Ill_breakscan11_4192:HG4_PB_HySA_16607:HG4_Ill_MetaSV_595;NumClusterSVs=15;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6860:HG4_Ill_GATKHCSBGrefine_7874:HG4_PB_SVrefine2Falcon1Dovetail_6904:HG4_PB_SVrefine2PBcRDovetail_5694;NumExactMatchSVs=4;ClusterMaxShiftDist=0.131298;ClusterMaxSizeDiff=0.131298;ClusterMaxEditDist=0.177099;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=328;DistBack=11531;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=10:69994891-69994906;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=611.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:33:./.:9:23:12:7:1|0:0:6:27:0:0/1:30:11:0/1:8:37:.:.:.
chr10	70022233	HG3_PB_pbsv_11108	A	ACCAGAATCACGAGGTCAGGAGATTGAGAACCACCCTGGCTAAACACATGAAACCCGCATCTCTACTAAAAATATACAAAAAATGAGGCCCGGGCATGGTGGTGGGCACCCTGTAGTCCCCAGCTACTTGCGGAGGCTGAAGGCAG	10	PASS	ClusterIDs=HG2_PB_HySA_20606:HG3_PB_pbsv_11108:HG3_PB_HySA_17188:HG2_PB_pbsv_11384;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_11108;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0928571;ClusterMaxSizeDiff=0.0857143;ClusterMaxEditDist=0.24055;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=145;DistBack=18775;DistForward=6157;DistMin=6157;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=176;REFWIDENED=10:70022058-70022233;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.9517;PctRecOverlap=0.5862;SizeDiff=7;StartDistance=57;EndDistance=57;GTMatch=0;TruScore=83;MatchId=612.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:32:0|1:34:0:0:35:./.:29:0:12:2:./.:49:3:./.:.:.:.:.:.
chr10	70685900	HG4_Ill_GATKHCSBGrefine_7875	T	TTCCAGCCTGGGTGACAAAGTGAGACCGTCTCTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTGTCGCCCAGGCTGGAGTGCAGTGGCGCCATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGAGCCCACCACCACGCCCAGCTAATTTGTTGTATTTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTTCGAAAGTGCTGGGATTACAGGCATGAGCCACTGCGCCTGGCCTTTATCTTTTTAAAAGACAGGTTCACCAGGAGCTGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACAAGGTCAGGCGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGATGGTGGGCACTTGTAGTCTCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATGGCGCCACTGAAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6907:HG4_PB_HySA_16613:HG2_PB_HySA_20616:HG2_PB_pbsv_11387:HG4_PB_pbsv_11399:HG3_PB_pbsv_11111:HG3_PB_HySA_17192:HG4_Ill_MetaSV_597:HG4_Ill_GATKHCSBGrefine_7875:HG2_Ill_MetaSV_580:HG3_Ill_GATKHCSBGrefine_7597:HG2_PB_HySA_20615:HG2_PB_PB10Xdip_4690:HG2_PB_SVrefine2Falcon1plusDovetail_1321:HG2_PB_SVrefine2PBcRplusDovetail_1262:HG2_PB_SVrefine2PB10Xhap12_8279:HG3_PB_SVrefine2PBcRDovetail_5322:HG2_Ill_SVrefine2DISCOVARplusDovetail_1504:HG3_Ill_SVrefine2DISCOVARDovetail_8368:HG2_10X_SVrefine210Xhap12_7988:HG2_PB_SVrefine2Falcon2Bionano_5462:HG4_PB_SVrefine2PBcRDovetail_5695:HG3_PB_SVrefine2Falcon1Dovetail_6862:HG4_Ill_SVrefine2DISCOVARDovetail_8157;NumClusterSVs=24;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_7875:HG4_Ill_MetaSV_597;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0790323;ClusterMaxSizeDiff=0.0774194;ClusterMaxEditDist=0.167975;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=604;DistBack=-16;DistForward=5281;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=96;REFWIDENED=10:70685821-70685916;PctSeqSimilarity=0.9992;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=613.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:25:0:28:./.:0:11:1:6:1/1:0:22:1/1:7:132:.:.:.
chr10	70774428	HG2_Ill_GATKHCSBGrefine_7690	A	ACCCTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_20617:HG3_PB_SVrefine2Falcon1Dovetail_6863:HG2_PB_pbsv_11388:HG2_PB_assemblyticsfalcon_2969:HG3_PB_pbsv_11112:HG4_PB_SVrefine2Falcon1Dovetail_6908:HG2_PB_SVrefine2Falcon2Bionano_5463:HG3_Ill_MetaSV_563:HG2_Ill_GATKHCSBGrefine_7690:HG2_PB_SVrefine2Falcon1plusDovetail_1322;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7690:HG3_Ill_MetaSV_563;NumExactMatchSVs=2;ClusterMaxShiftDist=0.147436;ClusterMaxSizeDiff=0.147436;ClusterMaxEditDist=0.189103;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=-37;DistForward=29;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=10:70774429-70774439;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=614.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:39:1|0:6:35:21:1:0|1:20:0:0:6:0/1:30:8:0/1:6:24:.:.:.
chr10	71092113	HG2_Ill_svaba_14219	T	TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_15262:HG3_Ill_GATKHC_18221:HG2_PB_HySA_20621:HG3_Ill_GATKHCSBGrefine_7599:HG2_Ill_GATKHC_18323:HG2_Ill_GATKHCSBGrefine_7693:HG2_PB_pbsv_11391:HG3_PB_pbsv_11114:HG3_Ill_svaba_14376:HG3_Ill_Krunchall_15289:HG3_Ill_250bpfermikitraw_14831:HG3_Ill_150bpfermikitraw_14377:HG2_Ill_svaba_14219:HG2_Ill_Krunchall_15594;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15262:HG3_Ill_svaba_14376:HG3_Ill_Krunchall_15289:HG3_Ill_250bpfermikitraw_14831:HG3_Ill_150bpfermikitraw_14377:HG2_Ill_svaba_14219:HG2_Ill_Krunchall_15594;NumExactMatchSVs=7;ClusterMaxShiftDist=0.171429;ClusterMaxSizeDiff=0.171429;ClusterMaxEditDist=0.271429;PBcalls=3;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=25984;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=10:71092114-71092152;PctSeqSimilarity=0.9949;PctSizeSimilarity=0.9863;PctRecOverlap=0.6575;SizeDiff=1;StartDistance=-25;EndDistance=-25;GTMatch=0;TruScore=87;MatchId=615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:25:./.:16:6:4:14:0|1:15:0:1:10:0/1:24:17:./.:.:.:.:.:.
chr10	71308734	HG2_Ill_MetaSV_584	T	TAAAAACAAGCTTTAGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_20624:HG2_PB_assemblyticsfalcon_2977:HG3_PB_pbsv_11115:HG3_PB_HySA_17199:HG2_Ill_breakscan11_4193:HG3_PB_SVrefine2PBcRDovetail_5324:HG3_PB_SVrefine2Falcon1Dovetail_6867:HG3_Ill_MetaSV_566:HG2_PB_SVrefine2Falcon1plusDovetail_1325:HG2_Ill_MetaSV_584:HG2_PB_pbsv_11393;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_MetaSV_584:HG2_PB_SVrefine2Falcon1plusDovetail_1325:HG3_Ill_MetaSV_566;NumExactMatchSVs=3;ClusterMaxShiftDist=0.226974;ClusterMaxSizeDiff=0.223684;ClusterMaxEditDist=0.253289;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=10:71308735-71308748;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=616.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:24:0|1:29:8:2:18:0|1:18:0:0:8:0/1:27:15:0/1:6:37:.:.:.
chr10	71610160	HG2_10X_SVrefine210Xhap12_7996	T	TAAGAGACATCAGGAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4194:HG2_PB_pbsv_11395:HG3_PB_pbsv_11117:HG2_PB_PB10Xdip_4694:HG4_PB_pbsv_11406:HG3_PB_SVrefine2Falcon1Dovetail_6869:HG2_PB_assemblyticsfalcon_2982:HG2_PB_assemblyticsPBcR_2896:HG2_PB_HySA_20627:HG3_PB_HySA_17202:HG4_PB_HySA_16622:HG4_Ill_MetaSV_605:HG4_Ill_GATKHCSBGrefine_7881:HG3_PB_SVrefine2PBcRDovetail_5326:HG3_Ill_MetaSV_568:HG3_Ill_GATKHCSBGrefine_7603:HG2_PB_SVrefine2PBcRplusDovetail_1266:HG2_PB_SVrefine2PB10Xhap12_8284:HG2_PB_SVrefine2Falcon2Bionano_5466:HG2_PB_SVrefine2Falcon1plusDovetail_1328:HG2_Ill_MetaSV_586:HG2_Ill_GATKHCSBGrefine_7697:HG2_10X_SVrefine210Xhap12_7996:HG4_PB_SVrefine2PBcRDovetail_5700:HG4_PB_SVrefine2Falcon1Dovetail_6913;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7996:HG2_Ill_GATKHCSBGrefine_7697:HG2_Ill_MetaSV_586:HG2_PB_SVrefine2Falcon1plusDovetail_1328:HG2_PB_SVrefine2Falcon2Bionano_5466:HG2_PB_SVrefine2PB10Xhap12_8284:HG2_PB_SVrefine2PBcRplusDovetail_1266:HG3_Ill_GATKHCSBGrefine_7603:HG3_Ill_MetaSV_568:HG3_PB_SVrefine2PBcRDovetail_5326:HG4_Ill_GATKHCSBGrefine_7881:HG4_Ill_MetaSV_605;NumExactMatchSVs=12;ClusterMaxShiftDist=0.149682;ClusterMaxSizeDiff=0.149682;ClusterMaxEditDist=0.226115;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=311;DistBack=40027;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:71610161-71610175;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=617.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:29:0:29:1/1:0:9:0:11:1/1:0:18:1/1:2:61:.:.:.
chr10	71752550	HG2_PB_SVrefine2PB10Xhap12_8285	C	CCCTCACCTCCTGGATAGGGCGGCTGGCTGGGCGGGGGGCTGTCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCCGGCCGGAAGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGACCCCCCCCCTCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTTCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGACTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6870:HG2_PB_PB10Xdip_4695:HG2_PB_pbsv_11396:HG2_PB_HySA_20629:HG4_PB_pbsv_11407:HG3_PB_SVrefine2PBcRDovetail_5327:HG3_PB_pbsv_11118:HG2_PB_SVrefine2Falcon2Bionano_5467:HG2_PB_SVrefine2PBcRplusDovetail_1267:HG2_PB_SVrefine2PB10Xhap12_8285:HG4_PB_SVrefine2PBcRDovetail_5701:HG2_PB_SVrefine2Falcon1plusDovetail_1329:HG4_PB_SVrefine2Falcon1Dovetail_6914;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8285:HG2_PB_SVrefine2PBcRplusDovetail_1267;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0644491;ClusterMaxSizeDiff=0.0643821;ClusterMaxEditDist=0.252327;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=495;DistBack=-337;DistForward=-1;DistMin=-337;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9189;REFWIDENED=10:71762278-71752700;PctSeqSimilarity=0.9916;PctSizeSimilarity=1;PctRecOverlap=0.9152;SizeDiff=0;StartDistance=-42;EndDistance=-42;GTMatch=0;TruScore=96;MatchId=618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:0:23:0:5:./.:0:0:0:0:./.:0:2:./.:4:44:.:.:.
chr10	71999743	HG2_PB_SVrefine2Falcon2Bionano_5468	C	CGGCAGAGGCGCTCCTCACTTCCCAGACGGGGCGGCCGGGCAGAGGCGCTCCTCACTTCCCAGACGGGGCGGCCGGGCAGAGGCGCTCCTCACTTCCCAGACGGGGCGGCCG	20	PASS	ClusterIDs=HG3_PB_pbsv_11119:HG2_PB_PB10Xdip_4696:HG4_PB_pbsv_11408:HG3_PB_SVrefine2PBcRDovetail_5328:HG3_Ill_SVrefine2DISCOVARDovetail_8375:HG2_PB_SVrefine2PBcRplusDovetail_1268:HG2_PB_SVrefine2PB10Xhap12_8286:HG2_PB_SVrefine2Falcon2Bionano_5468:HG2_Ill_SVrefine2DISCOVARplusDovetail_1510:HG4_PB_SVrefine2Falcon1Dovetail_6915:HG2_PB_assemblyticsPBcR_2900:HG2_PB_pbsv_11397;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1510:HG2_PB_SVrefine2Falcon2Bionano_5468:HG2_PB_SVrefine2PB10Xhap12_8286:HG2_PB_SVrefine2PBcRplusDovetail_1268:HG3_Ill_SVrefine2DISCOVARDovetail_8375:HG3_PB_SVrefine2PBcRDovetail_5328;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0707965;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.277056;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=111;DistBack=54;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1655;REFWIDENED=10:71998406-72000060;PctSeqSimilarity=0.994;PctSizeSimilarity=1;PctRecOverlap=0.5045;SizeDiff=0;StartDistance=55;EndDistance=55;GTMatch=0;TruScore=83;MatchId=619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:44:1/1:4:23:1:16:./.:2:2:1:1:./.:1:1:./.:.:.:.:.:.
chr10	72167700	HG2_PB_SVrefine2PB10Xhap12_8287	C	CCCTCACCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCTGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCTGGGCGGGGGGCTGACCCCCCCACCTCCCTTCCGGACGGGCGGCTGGCCGGGTGGGGGGATGACCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCTCCCCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6917:HG3_PB_pbsv_11121:HG2_PB_PB10Xdip_4698:HG2_PB_pbsv_11399:HG2_PB_SVrefine2PBcRplusDovetail_1269:HG2_PB_SVrefine2PB10Xhap12_8287:HG4_PB_SVrefine2PBcRDovetail_5703:HG2_PB_SVrefine2Falcon2Bionano_5469:HG3_PB_SVrefine2PBcRDovetail_5330:HG2_PB_SVrefine2Falcon1plusDovetail_1331:HG3_PB_SVrefine2Falcon1Dovetail_6872;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8287:HG2_PB_SVrefine2PBcRplusDovetail_1269;NumExactMatchSVs=2;ClusterMaxShiftDist=0.122222;ClusterMaxSizeDiff=0.116667;ClusterMaxEditDist=0.269727;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=375;DistBack=13730;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=304;REFWIDENED=10:72167701-72168004;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9973;PctRecOverlap=0.9253;SizeDiff=1;StartDistance=-28;EndDistance=-28;GTMatch=0;TruScore=97;MatchId=620.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:51:1/1:1:20:1:14:./.:0:0:0:0:1/1:0:8:./.:2:30:.:.:.
chr10	72314739	HG2_PB_assemblyticsfalcon_2992	T	TCCTCCCCCTCTCCCTCCCCCTCCTCCCCCCTCCTCCCCTCCCCCTCCTCCCCCCCCCCCTCCCTCCCCCTCCCCCTCCCCCTCCTCCCCTCCCCTCCCTCCCCTCCACTCCCCTTCCCTCCCTCCCTCCCTCCCCCCTCCCCTCCCCTCCACTCCCCTTCCCCTCCCCTCCACTCCCCTTCCCCTCCCCTCCCTCCTCCCCTCCCCTCCCCTCCCTCCCCTCCCTCCCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5704:HG2_PB_assemblyticsPBcR_2906:HG2_PB_assemblyticsfalcon_2992:HG2_PB_SVrefine2Falcon1plusDovetail_1332:HG2_PB_SVrefine2Falcon2Bionano_5470:HG2_PB_SVrefine2PBcRplusDovetail_1270:HG2_PB_SVrefine2PB10Xhap12_8288:HG2_PB_pbsv_11400:HG3_PB_SVrefine2Falcon1Dovetail_6873:HG2_PB_PB10Xdip_4699;NumClusterSVs=10;ExactMatchIDs=HG2_PB_assemblyticsfalcon_2992;NumExactMatchSVs=1;ClusterMaxShiftDist=0.230248;ClusterMaxSizeDiff=0.230248;ClusterMaxEditDist=0.283105;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=229;DistBack=-1;DistForward=20212;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=10:72314740-72314739;PctSeqSimilarity=0.9241;PctSizeSimilarity=0.9622;PctRecOverlap=0.8577;SizeDiff=-9;StartDistance=29;EndDistance=29;GTMatch=1;TruScore=91;MatchId=621.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:2:22:1:20:./.:0:0:1:1:./.:1:0:./.:.:.:.:.:.
chr10	72336934	HG3_Ill_GATKHCSBGrefine_7605	T	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTCTTTCTTTTC	20	PASS	ClusterIDs=HG2_PB_HySA_20634:HG3_PB_pbsv_11123:HG3_Ill_FB_9878:HG2_Ill_250bpfermikitraw_15276:HG2_Ill_150bpfermikitraw_14364:HG3_Ill_manta_2622:HG3_Ill_Spiral_11923:HG3_Ill_Krunchall_15305:HG3_Ill_GATKHC_18237:HG3_Ill_GATKHCSBGrefine_7605:HG3_Ill_250bpfermikitraw_14846:HG3_Ill_150bpfermikitraw_14389;NumClusterSVs=12;ExactMatchIDs=HG3_Ill_150bpfermikitraw_14389:HG3_Ill_250bpfermikitraw_14846:HG3_Ill_GATKHCSBGrefine_7605:HG3_Ill_GATKHC_18237:HG3_Ill_Krunchall_15305:HG3_Ill_Spiral_11923:HG3_Ill_manta_2622;NumExactMatchSVs=7;ClusterMaxShiftDist=0.137931;ClusterMaxSizeDiff=0.137931;ClusterMaxEditDist=0.191304;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=10:72336933-72336937;PctSeqSimilarity=0.9667;PctSizeSimilarity=0.9344;PctRecOverlap=0.9344;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=622.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:34:./.:13:17:5:9:./.:2:21:2:17:./.:2:38:./.:.:.:.:.:.
chr10	72527416	HG2_Ill_SVrefine2DISCOVARplusDovetail_1511	A	AAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAGGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG4_PB_pbsv_11415:HG4_Ill_SVrefine2DISCOVARDovetail_8165:HG2_PB_assemblyticsPBcR_2912:HG2_PB_SVrefine2Falcon2Bionano_5473:HG3_PB_SVrefine2PBcRDovetail_5333:HG3_Ill_GATKHC_18244:HG3_Ill_GATKHCSBGrefine_7608:HG2_Ill_GATKHC_18348:HG3_Ill_SVrefine2DISCOVARDovetail_8378:HG3_Ill_250bpfermikitraw_14849:HG2_Ill_SVrefine2DISCOVARplusDovetail_1511:HG2_Ill_150bpfermikitraw_14368:HG4_PB_HySA_16632:HG2_PB_SVrefine2PB10Xhap12_8292:HG2_PB_SVrefine2PBcRplusDovetail_1273:HG2_Ill_GATKHCSBGrefine_7703:HG4_Ill_250bpfermikitraw_15153:HG4_PB_SVrefine2PBcRDovetail_5707:HG3_PB_SVrefine2Falcon1Dovetail_6875:HG2_PB_pbsv_11408;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14368:HG2_Ill_SVrefine2DISCOVARplusDovetail_1511:HG3_Ill_250bpfermikitraw_14849:HG3_Ill_SVrefine2DISCOVARDovetail_8378;NumExactMatchSVs=4;ClusterMaxShiftDist=0.164251;ClusterMaxSizeDiff=0.164251;ClusterMaxEditDist=0.299517;PBcalls=10;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=100;DistBack=-1;DistForward=17;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=81;REFWIDENED=10:72527354-72527434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=624.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:41:1/1:2:18:2:20:0|1:8:0:0:9:0/1:6:41:./.:.:.:.:.:.
chr10	73180221	HG4_Ill_GATKHC_18374	A	ATGATGGATGATGATGGTGATGGTGATGATGATGGTGATAGTGATGATGATGGTGATAGTGATGATGATGGTAATGGTGATGGTGATGATGATGATGGTGATGGTAATGGTGATGATGATGATGATGATGGTGATGGTAATGGTGATGGTGATGATGATGATGATGGTGATGATGATGGTGATGATGATGGTGATGATGATGGTGATGGTGATGATGATGATGATGGTGATGGTAATGGTGATGATGATGATGATGGTGATGATGGTGATGGTGATGATGATGATGGTGATGGTAATGGTGATGGTGATGATGATGATGGTGATGATGATGGTGATGGTGATGATGATGATGGTGATGGTAATGGTGATGGTGATGATGATGGTGATGATGATGGTGATGGTGATGGTAATGGTGATGGTGATGATGATTGTGATGATGATGGTGATGGTGATGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1336:HG4_PB_pbsv_11417:HG2_PB_pbsv_11412:HG2_PB_PB10Xdip_4712:HG3_PB_pbsv_11132:HG4_Ill_GATKHC_18374:HG2_PB_SVrefine2PB10Xhap12_8294:HG4_Ill_SVrefine2DISCOVARDovetail_8166:HG2_PB_SVrefine2Falcon2Bionano_5474:HG2_PB_SVrefine2PBcRplusDovetail_1275:HG4_PB_SVrefine2PBcRDovetail_5708:HG3_PB_SVrefine2PBcRDovetail_5335:HG3_PB_SVrefine2Falcon1Dovetail_6877:HG4_PB_SVrefine2Falcon1Dovetail_6921;NumClusterSVs=14;ExactMatchIDs=HG4_Ill_GATKHC_18374;NumExactMatchSVs=1;ClusterMaxShiftDist=0.125275;ClusterMaxSizeDiff=0.114286;ClusterMaxEditDist=0.210989;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=454;DistBack=17;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=218;REFWIDENED=10:73180143-73180360;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9956;PctRecOverlap=0.9956;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:./.:0:8:0:3:./.:11:49:9:14:0/1:8:14:./.:6:64:.:1006:.
chr10	73193529	HG4_Ill_GATKHCSBGrefine_7907	C	CCCTCTCAGCTCTACTTTGTTTTTTGTTTTTTGTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTTTTTGCATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGCGAGCCACCGCGCCCGG	20	PASS	ClusterIDs=HG2_PB_HySA_20653:HG4_PB_pbsv_11418:HG3_PB_pbsv_11133:HG2_PB_HySA_20654:HG2_PB_pbsv_11413:HG2_PB_PB10Xdip_4713:HG2_PB_assemblyticsfalcon_3003:HG2_PB_assemblyticsPBcR_2918:HG2_Ill_breakscan11_4196:HG4_PB_HySA_16634:HG3_Ill_MetaSV_570:HG3_Ill_GATKHCSBGrefine_7611:HG2_Ill_SVrefine2DISCOVARplusDovetail_1514:HG2_PB_SVrefine2Falcon1plusDovetail_1337:HG4_PB_SVrefine2Falcon1Dovetail_6922:HG3_PB_SVrefine2Falcon1Dovetail_6878:HG4_PB_SVrefine2PBcRDovetail_5709:HG4_Ill_manta_2733:HG4_Ill_SVrefine2DISCOVARDovetail_8167:HG4_Ill_MetaSV_607:HG4_Ill_GATKHCSBGrefine_7907:HG2_PB_SVrefine2PBcRplusDovetail_1276:HG2_PB_SVrefine2PB10Xhap12_8295:HG2_PB_SVrefine2Falcon2Bionano_5475:HG2_Ill_MetaSV_588:HG2_Ill_GATKHCSBGrefine_7705:HG3_PB_HySA_17217;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7705:HG2_Ill_MetaSV_588:HG2_PB_SVrefine2Falcon2Bionano_5475:HG2_PB_SVrefine2PB10Xhap12_8295:HG2_PB_SVrefine2PBcRplusDovetail_1276:HG4_Ill_GATKHCSBGrefine_7907:HG4_Ill_MetaSV_607:HG4_Ill_SVrefine2DISCOVARDovetail_8167:HG4_Ill_manta_2733:HG4_PB_SVrefine2PBcRDovetail_5709;NumExactMatchSVs=10;ClusterMaxShiftDist=0.149847;ClusterMaxSizeDiff=0.149847;ClusterMaxEditDist=0.259259;PBcalls=17;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=327;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=10:73193530-73193547;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=626.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:./.:0:2:0:6:./.:0:4:0:3:1/1:0:31:1/1:2:57:.:1006:.
chr10	73661701	HG2_10X_SVrefine210Xhap12_8009	A	AGTGGCTCATGCCTGTAATCTCAGCACTTTGGGAGGCTGAGGCAGCAGATAACCTGAGGTCGAGAGTTCAAGACCAGCCTGGCCAATATGGCAAAACGCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCACACATCTGTAGTCCCAGCTACTCAGGAGGCCACGGCAGGAGCATCACTTGAACCCAGGAGGTAGAGGCTGCAGTGAGCCGAGATCACATCACTGAGCTCCAGCCTGGGTGACAGAACGAGACTCTGTCTCAAAAAATAATAATAATAATTAAAAATAAAAATTGGGCCGGGCGCG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8009:HG2_Ill_breakscan11_4197:HG3_PB_pbsv_11138:HG4_PB_pbsv_11423:HG2_PB_pbsv_11418:HG2_Ill_MetaSV_590:HG4_PB_HySA_16641:HG2_PB_HySA_20656:HG3_PB_SVrefine2PBcRDovetail_5337:HG2_PB_SVrefine2PBcRplusDovetail_1280:HG2_PB_SVrefine2Falcon1plusDovetail_1340;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8009:HG2_PB_SVrefine2Falcon1plusDovetail_1340;NumExactMatchSVs=2;ClusterMaxShiftDist=0.193333;ClusterMaxSizeDiff=0.193333;ClusterMaxEditDist=0.296422;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=315;DistBack=-210;DistForward=107;DistMin=-210;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=305;REFWIDENED=10:73661702-73662006;PctSeqSimilarity=0.9521;PctSizeSimilarity=0.9937;PctRecOverlap=0.0762;SizeDiff=2;StartDistance=-290;EndDistance=-290;GTMatch=0;TruScore=67;MatchId=628.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:0|1:23:0:0:23:1|0:0:22:24:0:0/1:14:22:0/1:2:10:.:.:.
chr10	76230335	HG2_Ill_150bpfermikitraw_14393	A	ACATCCTCACTAGCACTTGTTATTTTTCGGTTTTTTTTTTTTAATAGTGGTCATCCTAATGAGTATGCAATATCTCATTGTGGATTTGATTTTCATTTCCCTAATGATTAGTGATGTTGAGCATCTTTTCATATACCTGTTGGC	20	PASS	ClusterIDs=HG3_PB_pbsv_11143:HG3_PB_assemblyticsfalcon_3008:HG2_PB_pbsv_11424:HG4_PB_pbsv_11429:HG2_Ill_breakscan11_4198:HG4_PB_SVrefine2PBcRDovetail_5720:HG4_Ill_manta_2738:HG4_Ill_SVrefine2DISCOVARDovetail_8187:HG4_Ill_MetaSV_615:HG4_Ill_GATKHCSBGrefine_7919:HG4_Ill_250bpfermikitraw_15180:HG4_Ill_150bpfermikitraw_14556:HG3_PB_SVrefine2PBcRDovetail_5345:HG3_PB_SVrefine2Falcon1Dovetail_6886:HG3_Ill_manta_2629:HG3_Ill_Spiral_11951:HG3_Ill_SVrefine2DISCOVARDovetail_8392:HG3_Ill_MetaSV_577:HG3_Ill_GATKHCSBGrefine_7618:HG3_Ill_250bpfermikitraw_14874:HG3_Ill_150bpfermikitraw_14417:HG2_PB_SVrefine2PBcRplusDovetail_1286:HG2_PB_SVrefine2Falcon1plusDovetail_1346:HG2_Ill_manta_3227:HG2_Ill_SpiralSDKrefine_1943:HG2_Ill_SVrefine2DISCOVARplusDovetail_1527:HG2_Ill_MetaSV_594:HG2_Ill_GATKHCSBGrefine_7711:HG2_Ill_250bpfermikitraw_15299:HG2_Ill_150bpfermikitraw_14393:HG2_10X_SVrefine210Xhap12_8020;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8020:HG2_Ill_150bpfermikitraw_14393:HG2_Ill_250bpfermikitraw_15299:HG2_Ill_GATKHCSBGrefine_7711:HG2_Ill_MetaSV_594:HG2_Ill_SVrefine2DISCOVARplusDovetail_1527:HG2_Ill_SpiralSDKrefine_1943:HG2_Ill_manta_3227:HG2_PB_SVrefine2Falcon1plusDovetail_1346:HG2_PB_SVrefine2PBcRplusDovetail_1286:HG3_Ill_150bpfermikitraw_14417:HG3_Ill_250bpfermikitraw_14874:HG3_Ill_GATKHCSBGrefine_7618:HG3_Ill_MetaSV_577:HG3_Ill_SVrefine2DISCOVARDovetail_8392:HG3_Ill_Spiral_11951:HG3_Ill_manta_2629:HG3_PB_SVrefine2Falcon1Dovetail_6886:HG3_PB_SVrefine2PBcRDovetail_5345:HG4_Ill_150bpfermikitraw_14556:HG4_Ill_250bpfermikitraw_15180:HG4_Ill_GATKHCSBGrefine_7919:HG4_Ill_MetaSV_615:HG4_Ill_SVrefine2DISCOVARDovetail_8187:HG4_Ill_manta_2738:HG4_PB_SVrefine2PBcRDovetail_5720;NumExactMatchSVs=26;ClusterMaxShiftDist=0.107744;ClusterMaxSizeDiff=0.107744;ClusterMaxEditDist=0.203947;PBcalls=9;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=143;DistBack=123449;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=10:76230336-76230338;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=630.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:56:./.:0:0:1:2:1/1:0:24:0:20:1/1:0:37:./.:.:.:.:.:.
chr10	77093484	HG3_PB_SVrefine2Falcon1Dovetail_6888	TGG	CAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGTGGAGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCTCCCGGACGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCGGACGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGGGGGGGCTGACCCCCCCACCTCCTCCCGGATGGCGGCTGGCGGCGGGGGGCTGACCCGCTCCCTCCCGGACGGGGTGGCTGCCGGCGAGACTCCTCACTTCCCAGATGGGGTGGCTGCCGGGGGAGAGGCTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1348:HG3_PB_assemblyticsfalcon_3011:HG3_PB_SVrefine2Falcon1Dovetail_6888:HG4_PB_SVrefine2PBcRDovetail_5722:HG3_PB_SVrefine2PBcRDovetail_5347:HG2_PB_SVrefine2PBcRplusDovetail_1288:HG2_PB_SVrefine2Falcon2Bionano_5484:HG4_PB_SVrefine2Falcon1Dovetail_6933;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6888:HG3_PB_assemblyticsfalcon_3011;NumExactMatchSVs=2;ClusterMaxShiftDist=0.113135;ClusterMaxSizeDiff=0.113135;ClusterMaxEditDist=0.122723;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=520;DistBack=-2;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5178;REFWIDENED=10:77093335-77083683;PctSeqSimilarity=0.8952;PctSizeSimilarity=0.8058;PctRecOverlap=0.2428;SizeDiff=101;StartDistance=343;EndDistance=345;GTMatch=1;TruScore=64;MatchId=631.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:32:1/1:3:15:5:23:./.:0:0:3:0:./.:3:0:0/1:5:21:.:.:.
chr10	79452552	HG2_PB_HySA_20706	T	TATAAAAGAATATAGAAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4199:HG2_PB_pbsv_11435:HG3_PB_assemblyticsfalcon_3023:HG2_PB_HySA_20706:HG3_PB_SVrefine2PBcRDovetail_5352:HG3_PB_SVrefine2Falcon1Dovetail_6894:HG2_PB_SVrefine2Falcon2Bionano_5491:HG3_PB_pbsv_11152;NumClusterSVs=8;ExactMatchIDs=HG2_PB_HySA_20706;NumExactMatchSVs=1;ClusterMaxShiftDist=0.195122;ClusterMaxSizeDiff=0.19187;ClusterMaxEditDist=0.25;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=331;DistBack=18198;DistForward=48344;DistMin=18198;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=409;REFWIDENED=10:79452160-79452568;PctSeqSimilarity=0.9909;PctSizeSimilarity=0.9849;PctRecOverlap=0.9879;SizeDiff=5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=633.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:18:0|1:45:1:0:21:./.:3:2:29:0:0/1:21:10:0/1:7:17:.:.:.
chr10	80282825	HG4_Ill_GATKHC_18429	C	CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7718:HG2_PB_pbsv_11436:HG4_Ill_GATKHC_18429:HG4_Ill_GATKHCSBGrefine_7926:HG2_Ill_GATKHC_18411;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7718:HG4_Ill_GATKHC_18429:HG4_Ill_GATKHCSBGrefine_7926:HG2_Ill_GATKHC_18411;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0517241;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.103448;PBcalls=1;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=30;DistForward=5366;DistMin=30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=44;REFWIDENED=10:80282824-80282870;PctSeqSimilarity=0.9661;PctSizeSimilarity=0.9333;PctRecOverlap=0.9344;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=634.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:./.:24:12:2:14:./.:7:1:2:10:0/1:8:13:./.:.:.:.:.:.
chr10	82189345	HG3_PB_HySA_17292	C	CTCCTGCCCTGCCCTGCCCTGCCCTGCCCCTAGCCTCTCCTGCCCTGCCCTGCCCTGCCCCTAGCCTCT	10	PASS	ClusterIDs=HG3_PB_HySA_17291:HG2_PB_pbsv_11444:HG2_PB_HySA_20728:HG3_PB_pbsv_11158:HG3_PB_HySA_17292:HG2_PB_assemblyticsPBcR_2982;NumClusterSVs=6;ExactMatchIDs=HG3_PB_HySA_17292;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115108;ClusterMaxSizeDiff=0.100719;ClusterMaxEditDist=0.223776;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=68;DistBack=26;DistForward=54321;DistMin=26;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=10:82189344-82189346;PctSeqSimilarity=0.9843;PctSizeSimilarity=0.9853;PctRecOverlap=0.5942;SizeDiff=1;StartDistance=27;EndDistance=27;GTMatch=0;TruScore=85;MatchId=635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:./.:19:11:7:17:./.:7:10:9:1:./.:5:0:./.:.:.:.:.:.
chr10	82303672	HG2_Ill_GATKHCSBGrefine_7732	T	TTGTCTAGCTCAGGGATTGTAAATACACCAATCGGCACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTATGTCTAGCTCAAGGTTTGTGAATGCACCAGTCGACACTCTGTATCTAGCTACTCTGGTGGGGACTTGGAGAACCTTTGTGTCCACACTCTGTATCTAGTTAATCTGGTGGGGACGTGGAGAACCTTTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6943:HG2_PB_pbsv_11445:HG4_Ill_GATKHCSBGrefine_7936:HG4_PB_pbsv_11445:HG2_Ill_GATKHCSBGrefine_7732:HG2_PB_HySA_20729:HG2_PB_SVrefine2Falcon1plusDovetail_1354;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7732:HG4_Ill_GATKHCSBGrefine_7936;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0742459;ClusterMaxSizeDiff=0.0696056;ClusterMaxEditDist=0.207675;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=210;DistBack=-42;DistForward=1564;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=283;REFWIDENED=10:82303432-82303714;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:21:0|1:47:0:2:18:./.:29:0:1:8:0/1:18:23:./.:.:.:.:.:.
chr10	82387399	HG2_PB_HySA_20730	T	TAACAAAATTCCCGCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCCCCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCTCCACGGTCTCCCTCTGATGCCGAGCCAAGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCACCGCCACGCCTGACTGGTTTTTCGTTTTTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAGCCGCGAGTGATCCGCCAGCCTCAGCCTCCCAAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCACCCGTCTGGGAAGTGAGGAGCGTCTCTTGCTTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTGGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCGCGCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGTCCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCTTCTGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGCGGGGGGGGGGGTGTCGGCCAGCTGCCCCGTCCGGGAGGGAGGTGGGGGGTAAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGACGCCCCATCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGTTCAGCCCCCCGCCCGGCCAGCCGCCCCATCTGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCGCCGCCCGGGAGGGAGGTGGGGGGGTCATCCCCCCACCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCGTCCGGGAGGGGGAGTGGGGGGATCAGCCCCCCGCCTGGCCAGTCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGAAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGTGGGGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTTCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGGCCCTACTGGGAAGTGAGGACCCTCTGCGCGGCCAGCCGCCCCGTCGGGGGAGGGAGGGGTGGGGGGACAGCCCCCCGCCCAGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGTCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGGGGTGTCAGCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCCTGCCGGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTCTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAATAAATAAATTAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_20730:HG3_PB_pbsv_11159:HG2_PB_pbsv_11446:HG3_PB_HySA_17293:HG3_PB_SVrefine2Falcon1Dovetail_6896:HG4_PB_SVrefine2Falcon1Dovetail_6944:HG2_PB_SVrefine2PBcRplusDovetail_1296;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_20730;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0545194;ClusterMaxSizeDiff=0.053802;ClusterMaxEditDist=0.170175;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2757;DistBack=32614;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=10:82387400-82387400;PctSeqSimilarity=0.9922;PctSizeSimilarity=0.9993;PctRecOverlap=0.9993;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=637.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:42:0|1:30:1:1:25:./.:1:6:34:0:0/1:27:6:0/1:92:191:.:2960:.
chr10	82524373	HG4_PB_HySA_16704	G	GCAAATGAAAGAAAGGAAGCTGATGAATTCTTCACTCTCAGTTAACTTCTAGGTTTTTTCCTAAGATTTTTGGAGGCAAACAGAGTGTAGGGAATGAAGCAGGGTCTCTTGGGCTGTATGTTTTAGGACGGTTTATAAATTTCTGCAACTACCAAGTTACAGGTTAATTCATATGAAGGAAAGTTTTAAATTTACATTCCTTTTTCAACACAGAAAAAGTAAAGATTTTAAAAAGACAGGTAAAGGTTGATATGGGCCAGTTTTCTCTTTCTTGTCCTATTGAGTTTTGTGATATTTTGACAGGAGTAGGAGGAAAAAGACTGAAGGAAGACTGTTGCATTCTCTCTTTCTGGTTTTGTAAAATTTATCTCTGAAGTCTGAATGTCACAGTGTTATAAGTACTTGTCATGCCTTGCTGCACCATCCCTTGAAGGAAATCACAATACAATATGTCCAGTTTCTCTTGAAATAGAACTACTTATTCAGAAGGATAATGCATTATGACTGGCATAAGAAATCAAAGTTGGACACTTTTTCATTTTGCAAATATCCTAAACATCAGAAGAAATGAAATAATGCACATACACATATGCCATTGTCTTGGATTTTTCCTTAAATAACCCTAACATAGTAATCCTATATTGTTTTATAAATCAAACAATTAATTAGGCTTTGACTGGAAATCTAAGTAGTGGTCTAATAGAGGCCAAATATATGGGATCATTGTCTTTTTGTCCTATGTCTCAGTTTATGTATTTGTAGGATGGAGATGACACTATGTCACTTCTTCAAAGGATAGGCCACATAGTAAAGCCTGTAAAATGGATATGAATTGCATTCAGGGCAGTCATTAGGCTCATATACTCATGACCGCATAGAAAGCTTCATGTGTTTGCAAACCTGGTAATGTCAGCTGTGCCAGGGCGAAGTGGTGGCTTGGGTGGCTCAACAAGGACTCTGTGCCTAAATCTCCCACGGTGAGAGTCTAGGGTGTATGAGATGGTGAACAAGTGTGACACTGGGCACCAGTCATGGAACCTGTAGCCTCTGCCCTTGGTGGCGACCTACACTGCCCAGTAAGGAGGAGAGGCCTCCTCTATACTTCCTTGTAGGTAAGCAGGAGGTCTGGAGGGGCTGGGGAAATGAAGCAGGGAGGAGGGCCTGCATTCCTCACTCTCCCCCACCTTGCACTTCAAAATAGAAGCTTAGTTTCAGAATTTCTCAACTTATTTCTTAAAGCATTATATGCATTGCGTTTGCAGTATTTTGTTTTGTTTGGATTGTGAATGATGCGTTACTGCTTTTGTGTGTTATTTTCATTTGTTAACTAAAATAAAGTCTTCCAAAATATTTACTACACATTCATCAAACTTACCATTAAATGTGGATAGAAAAAAACACTCAGAAAAGAACAAATAACACCTGTGATAACTTCCAGTCACAGTGTTGAGCCCCTGGTTGACGAAGTGACCTCAGAAGCAGTGTGTCTGTCGTTGCTCATGGTCTCCCTCAGATGTGAGGTCCCCATCCACACACACACACACACACACACAGCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1355:HG4_PB_HySA_16704:HG4_PB_SVrefine2PBcRDovetail_5732;NumClusterSVs=3;ExactMatchIDs=HG4_PB_HySA_16704;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0979192;ClusterMaxSizeDiff=0.0852619;ClusterMaxEditDist=0.146267;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1556;DistBack=65641;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=10:82524374-82524373;PctSeqSimilarity=0.9276;PctSizeSimilarity=0.9158;PctRecOverlap=0.9164;SizeDiff=-143;StartDistance=28;EndDistance=28;GTMatch=0;TruScore=91;MatchId=638.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:32:0|1:30:0:0:27:./.:19:0:0:2:0/1:28:8:0/1:62:95:.:1609:.
chr10	82670410	HG3_Ill_250bpfermikitraw_14918	C	CAATGTCATCAGTTAAGGCAGGAACAGGCCATTTTCACTTCTTTTGTGGTGG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_15351:HG2_PB_pbsv_11448:HG2_PB_HySA_20733:HG3_PB_pbsv_11160:HG3_PB_HySA_17295:HG4_Ill_svaba_14364:HG4_PB_pbsv_11447:HG4_Ill_Krunchall_15967:HG4_Ill_GATKHCSBGrefine_7937:HG4_Ill_250bpfermikitraw_15227:HG3_Ill_svaba_14456:HG3_Ill_Spiral_11990:HG3_Ill_GATKHCSBGrefine_7632:HG3_Ill_250bpfermikitraw_14918:HG2_Ill_svaba_14303:HG2_Ill_manta_3234:HG2_Ill_GATKHCSBGrefine_7733;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15351:HG4_Ill_svaba_14364:HG4_Ill_Krunchall_15967:HG4_Ill_GATKHCSBGrefine_7937:HG4_Ill_250bpfermikitraw_15227:HG3_Ill_svaba_14456:HG3_Ill_Spiral_11990:HG3_Ill_GATKHCSBGrefine_7632:HG3_Ill_250bpfermikitraw_14918:HG2_Ill_svaba_14303:HG2_Ill_manta_3234:HG2_Ill_GATKHCSBGrefine_7733;NumExactMatchSVs=12;ClusterMaxShiftDist=0.12963;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.27027;PBcalls=5;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=6966;DistForward=28;DistMin=28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=30;REFWIDENED=10:82670411-82670440;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:27:0|1:27:4:5:28:1|0:1:9:18:0:0/1:20:15:./.:.:.:.:.:.
chr10	82972198	HG2_Ill_SVrefine2DISCOVARplusDovetail_1558	A	AAAATATGGAAACAACCCAAATGTTGATAAAGAGATGAGTGGATAAAGAAAAAGTATATAAAGTGAAATGTTCCACTGTAAAAAAAGATGGAAATCCTGTCATATGTAACAACATGGATAAATCTTGTGGAAATTAGGCTAAATGAAATAAGCCAGTCTCTGAGGACAAATACTGTATTACTCCACTTACATGAGGTATGTGAAAGAGTCAGACACCTAGAAGCAGAGAGCAGAATGGTGGTTGCCAGGGGTTGGAGGAAGGGGAAATAAGGAGTTGCTATTCAATGGGCATAAAATTTCAGTTATGCAAGATGATTAACTTCTAGAGAGCAGCTGTACAACATTGCAATGTGCCTATAGTTAATAATACTCTATTATATACTTTAACATTGTTAAGCGAGCAGATCTCATGTTAAGTGTTCTTACTGCAATAAAAAATGAAGAAATGGTAGAAAACTTATCAGAATTTTATTCTATTAGAAATTATGCAGAAAGAATTCACAATGACACAAGAGTGAAAATGCAATTTTTAAAAATGCAAATCTAAGTTATAAAATACAAAAATATAATTTTAAATTCAATGGAAAATGTTTCTAAGGTCACAGTGAAATGAGTAATTTTAGATATCCTAGCAGTAAAGTAAATGTGTACACATAATATGTAGAGCTATTTGGTACTATTAAATTATTTATAATATGCATACAGTTGACCCTACAATTCCATATTTATGAGTTTAGACATTTCAATTTCAAGGTATTTTAAGATAGATTTATTTTCAATAATGTGTATTGCCTTTTTGTAAGAGATGCAACTTCAGATACATGTAGAAATAATTACAGATCTGTGTATACACTAGTTAGTATAGAAACATTGTATTGTAAGACCTAGAGTTTCAAGTGCTGCCTTAACCTCTTATAAGCCTCACAGCCCCCTCAGAGGCCTAATTATCAATTCCCCTCTTCTTGCAATATATGTACCCCTAACCAGTGGGAAAAGTTCTCCACCTGGCTAGTTTCTCTGTAAGTTAGACCAGCTGTACTCTACATGTTTCTCAACTTAGGCTCTATCTTCATGCCAGACTGTGGAATTATTCAAACAAGGCAATTACACCCTCCCGCAGGAACCAGAGAACATCCAACCTTGTTCCTATGAATACTGCCTCCCACAGTCCCTGCTTGTTCACTTTGCTCCTGAGTGCAACCACTGTGTGGCCCTGAAGGGTGTGTGGTGTCCTCCTACCCCAGACTGTGAATATACGTGACTCGTATATTCCTGTCAATCTTCTTTGTCCAGTGCTGAGTGTTGTGTATTCTGTATCTCATACTATTTATGGTGGAAAGGGGATCTGTCTCTTAACAATGGGGTGAATAGGAGGCAATCAGAACAAATACACGTTTCCTTCCTCTATTAGCTGAAAGGACTTAGAAACAATGATGTCTTGGTAGCAAATAGCACAGCAAACACATAGATTTTGGTTTCTAATACTCCTCCAATAAGAGGAACTAGGATTTTTTTGAGAAGTGACTGATTCTAGGTCTGGGGCAAAAAATATACTTGATGAGCCTAGAGCATCTTTTGTTCAGAAAGTAAGGAAGTGCTTTAAAACTCCACAATGATAGGGCTCTGTCAAAGGATGTAGGAATCATCTATAAGGGCTCCCAGTGGTCAAAACTGAAAAAATTTGAGCAACAAAATAAATATAGTAGTATTGGATTATAGATGCAAAGTCTAAAATAAATATCTCTGAGTAAATATTAATATAAATAACCGGTTGATCAAATGAATGAATAAGAAGTAAGTAAATAGGATGAACTAGCCAAATTTTCTGTCTCCTGTGCAAAGGAATTCCAAATCATTTATGTAGATACTCAGCCCTCTCAGAAATGGTAAATAACTGCCCTTGACTGTGGGCTGCCTATAGTGACATCCCTTCAAAAATACACTATGAACAAGGGGAAAAAAGAGTGACTTTATGGTGGAGAAATCTGGAAAATAATGGACTCAGGTGACGGGATAATATCAATAGTAATAAGGCATGTCCATAGTATGTAGTGAGAATATCACTGTACTCTTCCTCACCACTAAAATCTAACCCCAGAATGGAGCTTTACTTCTGTGGCCTTTCTTTAAAAAATTTATAATCTCAGTGTCATTGTGATAAAACCATAATGCAAACCCAAATTGAGGGACTTTCTGCAAAACATCTGAGCAGTATGCCTCAAATGTCAAAGGTAAGCAGACAAAAGGAAAGACAGAAACTGTGATATCCTTGAGGGGCCTATAGGGATGTGATGATTAAATATACTGTGTATGCTGAATAAAATCCTGGGGGGGGAAAAGACGTGGTAAAAACTAAGAAAATTTAAATAAGGCGTGGTCATTGGTTAACAATAATGTATTCATATTGGTGAATTAGTTGTGTCAAATGGACCGTATCGTATTAGTCCATTCTCATGCTTCTAATAAAGACATACCTGTGACTGGGTAATTTATAAAGGAAAGAGGTTTAATTGACTCCTGGTTCAGCATGGCTGGGGAGGCTTCAGGAAACTTACAATCATGTTGGAAAGGGAAGCAAACACGTCCTTCTTTACATGGCGGTAGCAAGGAGAAGTGCCGAGCAAAAGGGGGAAAAGCCCCTTATAAAACCATCAGATCTCAAGGGAACTCACTCACTATCAGAAGAACAGCATGAGGGTAAGCACCCCCATGAATAAACTATCTCCTGCTGGGTCCCTCTCCTGACACAAGGGGATTATGGGAACTACAATTCAAGATGAGATTTGGGTGGGAACACAGCCAAACCACATCACATACTAACGTAAGGTGTTAACAATAGGGGAAACTGGGTGTGGAAGCTCTATACAGTCTTTGCAACTTTTTTTGACATCTGAAACAATTCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6899:HG4_PB_pbsv_11450:HG4_PB_HySA_16706:HG2_Ill_breakscan11_4200:HG2_PB_SVrefine2Falcon1plusDovetail_1357:HG4_PB_SVrefine2Falcon1Dovetail_6947:HG2_10X_SVrefine210Xhap12_8037:HG4_PB_SVrefine2PBcRDovetail_5735:HG4_Ill_SVrefine2DISCOVARDovetail_8214:HG3_Ill_SVrefine2DISCOVARDovetail_8421:HG2_PB_SVrefine2PBcRplusDovetail_1299:HG2_Ill_SVrefine2DISCOVARplusDovetail_1558:HG2_PB_SVrefine2Falcon2Bionano_5495;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1558:HG2_PB_SVrefine2PBcRplusDovetail_1299:HG3_Ill_SVrefine2DISCOVARDovetail_8421:HG4_Ill_SVrefine2DISCOVARDovetail_8214:HG4_PB_SVrefine2PBcRDovetail_5735;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0368929;ClusterMaxSizeDiff=0.0368929;ClusterMaxEditDist=0.174221;PBcalls=8;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=2902;DistBack=19472;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=10:82972199-82972201;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=640.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:100:1/1:1:18:0:36:1/1:0:12:0:9:1/1:0:49:1/1:7:388:.:2811:.
chr10	85667207	HG2_PB_SVrefine2Falcon1plusDovetail_1364	G	GAATCTAAGCTGTTCTTGTAAGGGGAAGCTTTATTTTAAGGTTCATGATAGTTGGATCTGTGCTGAGGTGGTCTTGCCTCCTGGAAATCTCCAGTCTAGGCTGCATGACACTGCTAAGTGACACATAGGGTAGGCCCTACAAGATATTTGCAAGGGCCTTATGGCTGTCATTATTCTTATAGTCACAATATGTCTATTATAGTATACTAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6906:HG4_PB_pbsv_11461:HG2_PB_pbsv_11461:HG4_PB_HySA_16717:HG4_PB_SVrefine2PBcRDovetail_5742:HG4_PB_SVrefine2Falcon1Dovetail_6953:HG2_PB_SVrefine2PBcRplusDovetail_1307:HG2_PB_SVrefine2Falcon2Bionano_5503:HG2_PB_SVrefine2Falcon1plusDovetail_1364:HG2_PB_HySA_20752;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1364:HG2_PB_SVrefine2Falcon2Bionano_5503:HG2_PB_SVrefine2PBcRplusDovetail_1307:HG4_PB_SVrefine2Falcon1Dovetail_6953:HG4_PB_SVrefine2PBcRDovetail_5742;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0515222;ClusterMaxSizeDiff=0.0421546;ClusterMaxEditDist=0.197701;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=209;DistBack=21986;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=208;REFWIDENED=10:85667208-85667415;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:0|1:28:2:0:21:./.:4:1:0:41:0/1:11:11:./.:.:.:.:.:.
chr10	85983243	HG2_PB_SVrefine2Falcon1plusDovetail_1365	G	GTTAATTGGGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_20753:HG4_PB_SVrefine2Falcon1Dovetail_6954:HG2_PB_HySA_20754:HG2_PB_pbsv_11462:HG2_Ill_breakscan11_4201:HG4_PB_pbsv_11462:HG2_PB_SVrefine2Falcon1plusDovetail_1365:HG2_PB_assemblyticsPBcR_3000:HG2_PB_SVrefine2Falcon2Bionano_5504:HG2_Ill_MetaSV_607:HG3_PB_SVrefine2Falcon1Dovetail_6907:HG2_PB_SVrefine2PBcRplusDovetail_1308;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1365;NumExactMatchSVs=1;ClusterMaxShiftDist=0.215434;ClusterMaxSizeDiff=0.215434;ClusterMaxEditDist=0.263666;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=323;DistBack=42288;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=10:85983244-85983259;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=642.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:47:0|1:45:2:1:40:0|1:12:0:0:6:0/1:14:8:0/1:4:23:.:.:.
chr10	86361717	HG2_Ill_GATKHCSBGrefine_7749	T	TACATCATACACACATCCCATTCACACACTCCACACTCATGCACAGATATCACATACATTGCACACCACACATACATTGTACACACATCCCATTCACACACACCACATCCATGCACAGATATCACATACGCTGCACACCACACCACACTTACTACATACCACACATATGTCCTAGACACATCCCATTCACACACGCCACACCCATGCACAGATATCACACACACCACACACCACACCATACGTACTACATACCACACATACAACATACACACATCCCATTCACACACTACTACACCCATGCACAGATATCACATACACCACACATACTACATACCATACACATATCATACACACATCCCATTCACATACACACCACACACAAACCACACCACCCATACCACCCATCACACACACAAACATATATCACAATACATTACACCTCGCTCATACCACACACACACACCACCCATATCACACATACCAAACACACTATATCACACACACACCACACACCATCCATATCACACATTACACACACAGTACATCACATACATATACTACACACACACCACACACTGCACACATACCACGCACACATCACACACACCACATCAAACACACCGTACACATACCACACACACCACAATACACCACACACATCAAGCACACCATACATACAAACCACACACACACCTTACACTTACCACACACACATCAAGCACACCATACATACAAACCACACGCACACCTTCCACATACC	20	PASS	ClusterIDs=HG4_PB_pbsv_11464:HG3_PB_pbsv_11178:HG2_PB_pbsv_11464:HG2_PB_assemblyticsPBcR_3002:HG3_PB_SVrefine2Falcon1Dovetail_6909:HG4_PB_SVrefine2PBcRDovetail_5745:HG4_Ill_MetaSV_624:HG4_Ill_GATKHCSBGrefine_7953:HG3_Ill_GATKHCSBGrefine_7644:HG2_PB_SVrefine2PBcRplusDovetail_1310:HG2_PB_SVrefine2PB10Xhap12_8311:HG2_PB_SVrefine2Falcon2Bionano_5506:HG2_PB_SVrefine2Falcon1plusDovetail_1367:HG2_Ill_GATKHCSBGrefine_7749:HG4_PB_SVrefine2Falcon1Dovetail_6956:HG3_Ill_MetaSV_597:HG2_Ill_MetaSV_609:HG2_PB_HySA_20756:HG4_PB_HySA_16720:HG2_PB_PB10Xdip_4760:HG2_Ill_breakscan11_4202;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7749:HG2_PB_SVrefine2Falcon1plusDovetail_1367:HG2_PB_SVrefine2Falcon2Bionano_5506:HG2_PB_SVrefine2PB10Xhap12_8311:HG2_PB_SVrefine2PBcRplusDovetail_1310:HG3_Ill_GATKHCSBGrefine_7644:HG4_Ill_GATKHCSBGrefine_7953:HG4_Ill_MetaSV_624:HG4_PB_SVrefine2PBcRDovetail_5745;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0736434;ClusterMaxSizeDiff=0.0736434;ClusterMaxEditDist=0.190777;PBcalls=14;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=759;DistBack=1420;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=10:86361718-86361727;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=643.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:1/1:2:23:2:24:1/1:3:108:0:85:1/1:0:17:1/1:1:169:.:.:.
chr10	86872296	HG2_Ill_MetaSV_610	A	ATGTCTTCCTTGCCCCTCTAATGCCAAGTGGAGATTTTGGCTGTCATTTTCTAGGAGGAAGTACAAAGAAAAAAGAAAAGAACCATTCCATCAATTACATACAAGACCCAAGTTCACTGAAAGAGGAATTTCACTGCCAGTCTCTGGCCATATTGGACCTCCCAAGCATTTATATTTAGAAATATGAGTTGTGCACTTGTCTGTCTTACTTGGCTTGGAAGCTGCTCC	20	PASS	ClusterIDs=HG2_PB_HySA_20761:HG2_PB_pbsv_11466:HG4_PB_pbsv_11466:HG2_Ill_breakscan11_4203:HG2_PB_SVrefine2Falcon2Bionano_5507:HG2_PB_SVrefine2Falcon1plusDovetail_1369:HG4_PB_SVrefine2PBcRDovetail_5747:HG4_Ill_svaba_14390:HG4_Ill_SVrefine2DISCOVARDovetail_8232:HG4_Ill_MetaSV_625:HG4_Ill_GATKHCSBGrefine_7954:HG4_Ill_Cortex_425:HG2_Ill_svaba_14329:HG2_Ill_SVrefine2DISCOVARplusDovetail_1571:HG2_Ill_MetaSV_610:HG2_Ill_GATKHCSBGrefine_7750:HG2_Ill_Cortex_995:HG2_10X_SVrefine210Xhap12_8049:HG3_PB_SVrefine2Falcon1Dovetail_6911:HG4_PB_HySA_16725;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8049:HG2_Ill_Cortex_995:HG2_Ill_GATKHCSBGrefine_7750:HG2_Ill_MetaSV_610:HG2_Ill_SVrefine2DISCOVARplusDovetail_1571:HG2_Ill_svaba_14329:HG4_Ill_Cortex_425:HG4_Ill_GATKHCSBGrefine_7954:HG4_Ill_MetaSV_625:HG4_Ill_SVrefine2DISCOVARDovetail_8232:HG4_Ill_svaba_14390:HG4_PB_SVrefine2PBcRDovetail_5747;NumExactMatchSVs=12;ClusterMaxShiftDist=0.121849;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.20284;PBcalls=8;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=227;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:86872297-86872298;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=644.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:0|1:31:1:0:25:0|1:33:0:0:42:0/1:22:18:./.:.:.:.:.:.
chr10	87176157	HG4_PB_SVrefine2PBcRDovetail_5748	A	ATGGAACCAAAAAAGAGCCTGCATTGCCAAGTCAATACTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCCACAGTAACCAAAACAGCATGGTAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1572:HG4_PB_HySA_16726:HG3_PB_pbsv_11179:HG2_PB_PB10Xdip_4761:HG4_PB_pbsv_11467:HG2_PB_pbsv_11467:HG4_PB_SVrefine2PBcRDovetail_5748:HG4_PB_SVrefine2Falcon1Dovetail_6959:HG4_Ill_SVrefine2DISCOVARDovetail_8235:HG3_PB_SVrefine2Falcon1Dovetail_6912:HG3_Ill_SVrefine2DISCOVARDovetail_8442:HG2_PB_SVrefine2PBcRplusDovetail_1311:HG2_PB_SVrefine2PB10Xhap12_8312:HG2_PB_SVrefine2Falcon2Bionano_5508:HG2_PB_SVrefine2Falcon1plusDovetail_1370;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1572:HG4_PB_SVrefine2PBcRDovetail_5748:HG4_PB_SVrefine2Falcon1Dovetail_6959:HG4_Ill_SVrefine2DISCOVARDovetail_8235:HG3_PB_SVrefine2Falcon1Dovetail_6912:HG3_Ill_SVrefine2DISCOVARDovetail_8442:HG2_PB_SVrefine2PBcRplusDovetail_1311:HG2_PB_SVrefine2PB10Xhap12_8312:HG2_PB_SVrefine2Falcon2Bionano_5508:HG2_PB_SVrefine2Falcon1plusDovetail_1370;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.047619;ClusterMaxEditDist=0.33463;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=123;DistBack=2036;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=262;REFWIDENED=10:87176158-87176419;PctSeqSimilarity=0.9896;PctSizeSimilarity=1;PctRecOverlap=0.4472;SizeDiff=0;StartDistance=-68;EndDistance=-68;GTMatch=0;TruScore=81;MatchId=645.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:1:18:1:21:./.:2:2:3:0:0/1:21:12:./.:.:.:.:.:.
chr10	88229006	HG2_Ill_GATKHCSBGrefine_7751	T	TAAATCATTAATAAAATGTCTCAAAATCACTCAGATCAGGTAGTTAAATCAGCACACTCTAC	20	PASS	ClusterIDs=HG3_PB_pbsv_11182:HG3_Ill_manta_2644:HG2_PB_pbsv_11470:HG3_Ill_GATKHC_18367:HG3_Ill_GATKHCSBGrefine_7646:HG3_Ill_Spiral_12017:HG2_PB_HySA_20767:HG4_Ill_GATKHC_18491:HG4_Ill_GATKHCSBGrefine_7959:HG2_Ill_manta_3245:HG2_Ill_GATKHC_18472:HG2_Ill_GATKHCSBGrefine_7751:HG3_Ill_scalpel_11052:HG3_Ill_150bpfermikitraw_14494:HG2_PB_PB10Xdip_4763:HG4_PB_HySA_16730;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7751:HG2_Ill_GATKHC_18472:HG2_Ill_manta_3245:HG4_Ill_GATKHCSBGrefine_7959:HG4_Ill_GATKHC_18491;NumExactMatchSVs=5;ClusterMaxShiftDist=0.184874;ClusterMaxSizeDiff=0.184874;ClusterMaxEditDist=0.251969;PBcalls=5;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=-1;DistForward=8;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=10:88229005-88229007;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=646.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:35:0|1:18:1:2:42:1|0:1:24:26:0:0/1:15:16:./.:.:.:.:.:.
chr10	88264172	HG2_PB_PB10Xdip_4764	G	GCCTGTAATCCCAGCACTTTGGGAGGCGAGGCAGGTGGATCAGGAGATCAGGAGATCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCTGTCTCTACTAAAAATTAGCCGGACGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGGCAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCTGAGATTGCGCCACTGCACTCCAGCCTAGACAACAGAGCAAGACTCTGTCTCGAAAAAAAAAAAAAAGCCACCATCAGGTAAGTACTACTGCCAAGTTCATAATCCCTTACCCACAATTCCAACATCCAAAAAGCTCTAAAAAGTAAAAAGTTTTCTCATAACACACTTGGAAGCAAAACCCCAACCAAAGGGAGGCTATTTATAGTATTTACCCTACTTAGGGAAGGTATTTTCTTTTCTGAAAAAACACTATCTTTGATTAGAGAACACCACCTCAGATCCTGATAGGGGCGTTAATGTAAACTTTCCAAAATCCAAAATAATTCTAAATTCTAAGACACATCTGGCCCCAACGGTTTCAGAAAAGGAAATGTGAATCTCTAACTCATTCCACAGATAAAGGACAGTGGGCTTAAATTACTAGTTGTTGATTACATCTCTATTAAGTGGTATTTACTCTCTGAAAAATAAGGCAACTTATTAAAAAAAATTGGAAGCAACTTTAAAGTCTGACATTAATAAGGAATTGCTTAAGTAATTTATAGCACATACAGAATTTGACAACATGCAACAGTATTTTTTCAAAGGGTAGGGAGAGGGCCAAAAAGAAAACTGATACGGAATTATCCCCAAGATATTACATGAGAAAGAGTAAGGTACAAAACAGCAGCAAATTATCATTTTGTGGATTTTAATTTTGTGGATTAAAATACACAGGCACACATGTACATACAGATATGTGGAACTGCCTGTATGTGCACAGAACATACCAGAAAGGTTCAAACAAATAACAATGAATGGTCATTCCAGAGAAAACTGAGGTGGCTAAGGAAATGTACTAGGAGGGAAGCTTTTAACCAACACCATATTGAACCATGTGCAAATAAAAGGTATTTTTGTGTGTTTTTTGGGCTTTTTTTTTTTTTTTTTTTTTTGCAACGGAGTCTCACTCTGTCTCCCAGGCTGGAGGGCAGTGGCGCAACCTCTGCTCACTGCAACCTCTGCCTCCCTGGTTCAAGCTGCCTCAGTCTCCTGAGTAGCTGGTATTACAGGCACCCTCTACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTGGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGCAATCCACTCACCTCGGCCTCCCAAAGTGCTAGGATTACAGGCATGAGAAACTGAGCCCAGCCATAAACGGTTTTAAAAATAAAAGTAGGGCAGGGGCTGGGCGTGGTGGCTCACGCCCGTAATCCCTAAGGCATGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCAGTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCATCTAAAAAATAAACAAATAAATAAATAAAATAAATAGATAAATGTATAAGCCCTTTCAATGCCACTTAAGAAACATCTCCTACCCTTATATTCAGACATGTGACATGATGGTCAAAGACATACATAAAAAGACATTCAATATAACATTTATGTGTAATAGCAAAAGACTAGAAACAGCCAAAATATCCATAAGAGACCATTATTATAGTACATCCATGCAATGGAAAACTATGAAACTGCTTTAAAAAAAACCAAGGCAGATCTATAAATATAAGATTATAAAAAAATCTATAAATAAATCTATAATAATCATATCAGATTATAATGAAAAGATTATAACTTTAATAATTATAATCTTATTAATATTTATAGATCTGCCTTATAATAATATCTTAAAGATTAAGTGTTCTTAAAGGCATAATACACTAAATATATATATATGCATATATGCTCCCATTTGTGTTTTTAAGAATACAAATATAGACATACATGCTGTGCCCATTAAAGACTGTAACAAACTGTTAACAGCATTGGTTTCAGTGGAAGAGAACTCACTTTTCACTGTTAATAAGGTCATGTGGCTGATCACCAGAGGCACCTGAAAGGCCACAGGAAAAACACAGCACATCTTCCTAAGTGAGCAAATCTTTACTCAAAGATTTGAAAGGTAAAAATTATTTTTTAAAACAGTTAAGGCCAGGTACTGTGGCTCATGCCTGTAATCGCAGCACTCTGGGAGGCCGAGGCGGGCAGATCACTTGAGGTCAGTAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCGTGTCTACTAAAAATACAAAAAATTGCCATGAGTGGTGCTGCATGCATGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTCGTCCCAGGAGGCAGAGGTTGCGGTGAGCCAAGAGCCGCCACCGCACTCCAGCCTGGTCAACAGAGTGAGACTCCGTCTTGGCGGGAAAAAAAACCGGTTAAGCGTTACAATTGGTAATCCAAAACATTTTATATTTTATAAGGCATACCTATAAAATACAAAATTGACATGCAATTTTAAAGATAAAACACTAACCTAAAAACAATTTCAAAAGTACTATTCAGCTCGGCCCACCACACAGAACAGTTCAGGTTATCGCAACCTTCCCTTAACTCCCACCAACACAGCCTGTGGAGAGCCTCACTGCCAACTGCCACAGCTTATCTGCACATCAAGGAGCTTGTTTGCTCCCTGGCCTCCTGCTGAAGCTGCCCATCTCTGTCCTACCCTTGCAGAATAGGAAACACACCACACACCCCAGCCACTCCTCAACCAACGAGCCTTGGGCCTCCCTTCCAGGTGGCAATTAATTATTCAAACTAGAGACACATACCCCCAGAGGTAAACAAAGGCTTTTCAAATATAGGTACAATTGCATTTTAAGGAAATTCACTTCTAAATCCCCAACCTCCAGGTGTAAACTGTTCCAAAAACTGATTTTCCAACCCATCTGGGATTAACCAATCACTCTTCTCCCATATTACAAACATTAATAACAGCATATCGCTCACCTATCCCTAATCTCATATGGTACATTTTTCCAACTCTTGACATGACCTATAAAGAAATAATGTGATAGATTGTTGGTTTCTGTACTTCGTAATTAAGTAAAACTTTCATGTGTGGGTAACAAATCCTTGCATGTCAGGTGGTTTCCTAAATTAATTGCATTTCACAGAATTGAAAAGATCTAACAAACTGACTCATTATTACAATGAATTTCTATGATTACCACGTGCTTTGTGGCATGTAAGAATTCAAATAATAGAAACTGCTATAGCAAAACTCTTACCATTCTTACCTTTATTTTGTTAATTTATGGCTTCTCAACATTTACACACATTAAAAAATTGAAATAGGAGGTCGGGTGCAGGGGCTCACA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8054:HG4_PB_pbsv_11477:HG2_PB_PB10Xdip_4765:HG3_PB_pbsv_11183:HG2_PB_PB10Xdip_4764:HG2_PB_pbsv_11471:HG4_PB_HySA_16731:HG3_PB_SVrefine2Falcon1Dovetail_6914:HG2_PB_SVrefine2Falcon1plusDovetail_1373:HG2_Ill_SVrefine2DISCOVARplusDovetail_1577:HG4_Ill_SVrefine2DISCOVARDovetail_8243:HG4_PB_SVrefine2Falcon1Dovetail_6961:HG4_PB_SVrefine2PBcRDovetail_5752:HG2_PB_SVrefine2Falcon2Bionano_5510:HG2_PB_SVrefine2PBcRplusDovetail_1313:HG2_PB_SVrefine2PB10Xhap12_8314:HG3_Ill_SVrefine2DISCOVARDovetail_8447;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_4764:HG2_PB_PB10Xdip_4765;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0500765;ClusterMaxSizeDiff=0.0497983;ClusterMaxEditDist=0.236524;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=3511;DistBack=-209;DistForward=16762;DistMin=-209;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=225;REFWIDENED=10:88264157-88264381;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:71:1/1:0:26:0:25:./.:1:3:1:12:./.:4:27:1/1:2:414:.:3391:.
chr10	88284470	HG4_Ill_250bpfermikitraw_15263	A	ACTGAAATCATGGATCAGAGCCAAGTTTGTAGTACCCTTAGGAGGGGCCTCTGCCCTCCTGTGTGCTGCCTGGGTGAGGACAGAACCCCCTAAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8315:HG2_10X_SVrefine210Xhap12_8055:HG2_PB_PB10Xdip_4766:HG3_PB_pbsv_11184:HG4_PB_HySA_16732:HG2_PB_pbsv_11472:HG4_Ill_Krunchall_16004:HG4_Ill_GATKHC_18492:HG4_Ill_250bpfermikitraw_15263:HG3_Ill_SVrefine2DISCOVARDovetail_8448:HG3_Ill_Krunchall_15409:HG3_Ill_GATKHCSBGrefine_7647:HG3_Ill_250bpfermikitraw_14950:HG3_Ill_150bpfermikitraw_14495:HG2_Ill_SVrefine2DISCOVARplusDovetail_1578:HG2_Ill_Krunchall_15731:HG2_Ill_GATKHC_18473:HG2_Ill_250bpfermikitraw_15379:HG3_PB_HySA_17322:HG2_PB_HySA_20768;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15379:HG2_Ill_GATKHC_18473:HG2_Ill_Krunchall_15731:HG2_Ill_SVrefine2DISCOVARplusDovetail_1578:HG3_Ill_150bpfermikitraw_14495:HG3_Ill_250bpfermikitraw_14950:HG3_Ill_GATKHCSBGrefine_7647:HG3_Ill_Krunchall_15409:HG3_Ill_SVrefine2DISCOVARDovetail_8448:HG4_Ill_250bpfermikitraw_15263:HG4_Ill_GATKHC_18492:HG4_Ill_Krunchall_16004;NumExactMatchSVs=12;ClusterMaxShiftDist=0.174359;ClusterMaxSizeDiff=0.174359;ClusterMaxEditDist=0.27551;PBcalls=7;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=93;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=96;REFWIDENED=10:88284471-88284566;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:25:0|1:23:2:0:24:./.:3:18:8:0:0/1:17:28:./.:.:.:.:.:.
chr10	89373666	HG3_Ill_GATKHCSBGrefine_7653	T	TAAGAGGCCATGTATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4205:HG2_PB_PB10Xdip_4774:HG4_PB_pbsv_11481:HG4_PB_SVrefine2PBcRDovetail_5754:HG3_PB_assemblyticsfalcon_3081:HG2_PB_assemblyticsfalcon_3104:HG4_PB_assemblyticsfalcon_3003:HG4_PB_HySA_16735:HG2_Ill_MetaSV_614:HG3_PB_pbsv_11187:HG2_PB_pbsv_11475:HG2_PB_HySA_20788:HG3_PB_SVrefine2Falcon1Dovetail_6916:HG2_PB_SVrefine2PBcRplusDovetail_1317:HG2_PB_SVrefine2PB10Xhap12_8319:HG3_Ill_MetaSV_602:HG3_Ill_GATKHCSBGrefine_7653:HG2_PB_SVrefine2Falcon2Bionano_5512:HG2_PB_SVrefine2Falcon1plusDovetail_1376:HG4_PB_SVrefine2Falcon1Dovetail_6964:HG3_PB_HySA_17327;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1376:HG2_PB_SVrefine2Falcon2Bionano_5512:HG3_Ill_GATKHCSBGrefine_7653:HG3_Ill_MetaSV_602;NumExactMatchSVs=4;ClusterMaxShiftDist=0.128637;ClusterMaxSizeDiff=0.128637;ClusterMaxEditDist=0.196018;PBcalls=17;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=327;DistBack=14125;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:89373667-89373681;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=649.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:79:./.:0:4:0:5:./.:0:0:0:0:./.:0:7:1/1:2:55:.:.:.
chr10	89415446	HG4_PB_HySA_16736	T	TATTTTTTTTTTTTTTTGAGACGAGTCTCGCTCTGTCCACAGGCTGGATGCAGTGGCGGGATCTCGCTCAATGCAAAGCTCCGCTCCCGGGTCACGCCATTCTCCTGCTCCAGCCTCCCAAGCTCCTACCATTGTTTG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_8248:HG4_PB_HySA_16736:HG4_PB_pbsv_11482:HG2_PB_pbsv_11476:HG3_PB_pbsv_11188;NumClusterSVs=5;ExactMatchIDs=HG4_PB_HySA_16736;NumExactMatchSVs=1;ClusterMaxShiftDist=0.123288;ClusterMaxSizeDiff=0.109589;ClusterMaxEditDist=0.194444;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=137;DistBack=4;DistForward=3129;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=10:89415447-89415447;PctSeqSimilarity=0.943;PctSizeSimilarity=0.9448;PctRecOverlap=0.8621;SizeDiff=-8;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=91;MatchId=650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:41:./.:29:11:6:26:./.:18:0:3:10:0/1:27:9:./.:.:.:.:.:.
chr10	89814960	HG2_PB_assemblyticsfalcon_3108	TAGAATGACTTGATAC	CTAGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6917:HG2_PB_pbsv_11477:HG3_PB_pbsv_11189:HG3_PB_HySA_17331:HG4_PB_pbsv_11484:HG2_PB_HySA_20792:HG4_PB_HySA_16739:HG3_PB_SVrefine2PBcRDovetail_5359:HG4_PB_assemblyticsfalcon_3005:HG2_PB_assemblyticsfalcon_3108:HG3_PB_assemblyticsfalcon_3083:HG4_PB_SVrefine2Falcon1Dovetail_6965:HG2_PB_SVrefine2Falcon1plusDovetail_1377;NumClusterSVs=13;ExactMatchIDs=HG2_PB_assemblyticsfalcon_3108;NumExactMatchSVs=1;ClusterMaxShiftDist=0.202572;ClusterMaxSizeDiff=0.199357;ClusterMaxEditDist=0.276527;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=299;DistBack=2599;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:89814976-89814959;PctSeqSimilarity=0.9488;PctSizeSimilarity=0.8979;PctRecOverlap=0.9429;SizeDiff=-34;StartDistance=-9;EndDistance=6;GTMatch=0;TruScore=92;MatchId=651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:41:0|1:37:0:0:37:./.:10:1:29:0:0/1:42:7:0/1:17:22:.:.:.
chr10	89892056	HG2_PB_SVrefine2Falcon2Bionano_5513	C	CTTACGATGGGAAGTGAATACAGTATGAAAAGGGAGTGGGACATATGAGAGGAACGACAGGCTCAAAATATGAAGACTTAATCCAGACACCTCTGGA	20	PASS	ClusterIDs=HG2_PB_HySA_20794:HG4_PB_pbsv_11485:HG3_PB_HySA_17333:HG2_PB_pbsv_11478:HG4_PB_SVrefine2Falcon1Dovetail_6966:HG3_PB_pbsv_11190:HG4_PB_SVrefine2PBcRDovetail_5756:HG4_Ill_SVrefine2DISCOVARDovetail_8251:HG4_Ill_Krunchall_16017:HG4_Ill_GATKHC_18508:HG4_Ill_GATKHCSBGrefine_7967:HG4_Ill_250bpfermikitraw_15274:HG3_Ill_SVrefine2DISCOVARDovetail_8458:HG3_Ill_Krunchall_15418:HG3_Ill_GATKHC_18379:HG3_Ill_GATKHCSBGrefine_7655:HG3_Ill_250bpfermikitraw_14959:HG2_PB_SVrefine2Falcon2Bionano_5513:HG2_Ill_SVrefine2DISCOVARplusDovetail_1585:HG2_Ill_Krunchall_15740:HG2_Ill_GATKHCSBGrefine_7758:HG2_Ill_250bpfermikitraw_15390:HG4_PB_HySA_16740;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15390:HG2_Ill_GATKHCSBGrefine_7758:HG2_Ill_Krunchall_15740:HG2_Ill_SVrefine2DISCOVARplusDovetail_1585:HG2_PB_SVrefine2Falcon2Bionano_5513:HG3_Ill_250bpfermikitraw_14959:HG3_Ill_GATKHCSBGrefine_7655:HG3_Ill_GATKHC_18379:HG3_Ill_Krunchall_15418:HG3_Ill_SVrefine2DISCOVARDovetail_8458:HG4_Ill_250bpfermikitraw_15274:HG4_Ill_GATKHCSBGrefine_7967:HG4_Ill_GATKHC_18508:HG4_Ill_Krunchall_16017:HG4_Ill_SVrefine2DISCOVARDovetail_8251;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0612245;ClusterMaxEditDist=0.231156;PBcalls=9;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=96;DistBack=12118;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=94;REFWIDENED=10:89892057-89892150;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=652.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:0|1:27:4:3:18:0|1:10:0:0:14:0/1:17:28:./.:.:.:.:.:.
chr10	91847171	HG4_Ill_GATKHCSBGrefine_7976	T	TCTGATCATCTGGCATTTTGAGTCCTCTCAGAGGTCATGGACGTATGGAGAGAGAAA	20	PASS	ClusterIDs=HG4_PB_HySA_16752:HG3_PB_pbsv_11199:HG3_PB_assemblyticsfalcon_3094:HG4_PB_assemblyticsfalcon_3022:HG4_Ill_manta_2755:HG4_Ill_Krunchall_16030:HG4_Ill_GATKHCSBGrefine_7976:HG4_Ill_150bpfermikitraw_14668:HG3_Ill_Spiral_12039:HG3_Ill_Krunchall_15443:HG3_Ill_GATKHC_18399:HG3_Ill_GATKHCSBGrefine_7663:HG3_Ill_250bpfermikitraw_14978:HG3_Ill_150bpfermikitraw_14524:HG2_PB_assemblyticsfalcon_3125:HG2_Ill_manta_3252:HG2_Ill_SpiralSDKrefine_2023:HG2_Ill_Krunchall_15757:HG2_Ill_GATKHCSBGrefine_7764:HG2_Ill_250bpfermikitraw_15404:HG2_Ill_150bpfermikitraw_14500:HG4_Ill_svaba_14416:HG3_Ill_svaba_14515:HG3_Ill_manta_2651:HG2_Ill_svaba_14353:HG2_PB_pbsv_11487:HG2_PB_HySA_20816;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14500:HG2_Ill_250bpfermikitraw_15404:HG2_Ill_GATKHCSBGrefine_7764:HG2_Ill_Krunchall_15757:HG2_Ill_SpiralSDKrefine_2023:HG2_Ill_manta_3252:HG2_PB_assemblyticsfalcon_3125:HG3_Ill_150bpfermikitraw_14524:HG3_Ill_250bpfermikitraw_14978:HG3_Ill_GATKHCSBGrefine_7663:HG3_Ill_GATKHC_18399:HG3_Ill_Krunchall_15443:HG3_Ill_Spiral_12039:HG4_Ill_150bpfermikitraw_14668:HG4_Ill_GATKHCSBGrefine_7976:HG4_Ill_Krunchall_16030:HG4_Ill_manta_2755:HG4_PB_assemblyticsfalcon_3022;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0847458;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.2;PBcalls=7;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=1075;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=10:91847172-91847175;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=653.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:0|1:23:1:0:34:1|0:1:38:35:0:0/1:16:16:./.:.:.:.:.:.
chr10	92215056	HG4_Ill_GATKHCSBGrefine_7977	T	TCCTTTGTCCATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTA	20	PASS	ClusterIDs=HG4_PB_HySA_16755:HG3_PB_pbsv_11200:HG3_PB_HySA_17358:HG2_PB_pbsv_11488:HG4_PB_pbsv_11496:HG4_PB_assemblyticsfalcon_3025:HG2_PB_assemblyticsfalcon_3128:HG3_PB_assemblyticsfalcon_3096:HG2_PB_HySA_20819:HG2_PB_HySA_20818:HG4_PB_SVrefine2Falcon1Dovetail_6972:HG4_PB_SVrefine2PBcRDovetail_5766:HG4_Ill_MetaSV_636:HG4_Ill_GATKHCSBGrefine_7977:HG2_Ill_MetaSV_617:HG2_Ill_GATKHCSBGrefine_7765:HG2_PB_SVrefine2Falcon1plusDovetail_1382:HG2_PB_SVrefine2Falcon2Bionano_5519:HG3_PB_SVrefine2Falcon1Dovetail_6923;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7765:HG2_Ill_MetaSV_617:HG4_Ill_GATKHCSBGrefine_7977:HG4_Ill_MetaSV_636;NumExactMatchSVs=4;ClusterMaxShiftDist=0.161648;ClusterMaxSizeDiff=0.161648;ClusterMaxEditDist=0.278922;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=10:92215057-92215072;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=654.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:51:0|1:39:4:3:47:0|1:25:0:0:7:0/1:16:13:0/1:6:34:.:.:.
chr10	92227496	HG2_PB_SVrefine2PBcRplusDovetail_1323	T	TCCCCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTCGCTCTGTGCCAGGCTGGAGTGCAGTGCCAATCTCGCTCACTGCAGCTCCGCCTCCTTCACCCATTCTCCTGCTCAGCTCCAAGTACTGGACTACAGCCCCCACTACCCGCTATTTTTGTATTTTAGTAGAGACTTTCACCGTTTAGCGGATGGTCTCGATCTCTGACCTCTGATCCCCCCTCGCCCCAATGCTGGATTACAGCTACCCCCCC	20	PASS	ClusterIDs=HG2_PB_HySA_20820:HG2_PB_SVrefine2PB10Xhap12_8327:HG2_PB_PB10Xdip_4784:HG4_PB_assemblyticsfalcon_3026:HG4_PB_pbsv_11497:HG2_PB_pbsv_11489:HG3_PB_assemblyticsfalcon_3097:HG2_PB_assemblyticsfalcon_3129:HG4_Ill_MetaSV_637:HG2_Ill_breakscan11_4207:HG2_PB_SVrefine2PBcRplusDovetail_1323:HG2_PB_SVrefine2Falcon1plusDovetail_1383:HG4_PB_SVrefine2Falcon1Dovetail_6973:HG3_PB_SVrefine2Falcon1Dovetail_6924:HG4_PB_HySA_16756:HG2_PB_SVrefine2Falcon2Bionano_5520:HG4_PB_SVrefine2PBcRDovetail_5767:HG4_Ill_GATKHCSBGrefine_7978;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_1323;NumExactMatchSVs=1;ClusterMaxShiftDist=0.236667;ClusterMaxSizeDiff=0.236667;ClusterMaxEditDist=0.250883;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=261;DistBack=12424;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:92227497-92227511;PctSeqSimilarity=0.8988;PctSizeSimilarity=0.8156;PctRecOverlap=0.8131;SizeDiff=-59;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=84;MatchId=655.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:35:0|1:24:7:1:20:0|1:29:0:0:5:0/0:27:0:./.:.:.:.:.:.
chr10	92404112	HG4_Ill_manta_2756	G	GAGAGGCATTGCCTGAGCTGCAGTTTTTAGGAATGAATCAGGAGGAAGGGAAGGCAAGAACACAGAGGGCTTAACACTATTGTTGTGGGTGGTAAAACAAGGCTTTATGAC	20	PASS	ClusterIDs=HG2_PB_HySA_20821:HG4_PB_assemblyticsfalcon_3028:HG3_PB_assemblyticsfalcon_3098:HG4_PB_pbsv_11498:HG4_PB_SVrefine2PBcRDovetail_5768:HG2_PB_pbsv_11490:HG4_Ill_manta_2756:HG4_Ill_SVrefine2DISCOVARDovetail_8266:HG4_Ill_GATKHC_18524:HG4_Ill_GATKHCSBGrefine_7979:HG4_Ill_250bpfermikitraw_15289:HG4_Ill_150bpfermikitraw_14673:HG2_PB_SVrefine2Falcon2Bionano_5521:HG2_Ill_manta_3253:HG2_Ill_GATKHC_18502:HG2_Ill_GATKHCSBGrefine_7766:HG2_10X_SVrefine210Xhap12_8069:HG4_PB_SVrefine2Falcon1Dovetail_6974:HG3_PB_SVrefine2Falcon1Dovetail_6925:HG4_Ill_MetaSV_638;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8069:HG2_Ill_GATKHCSBGrefine_7766:HG2_Ill_GATKHC_18502:HG2_Ill_manta_3253:HG2_PB_SVrefine2Falcon2Bionano_5521:HG4_Ill_150bpfermikitraw_14673:HG4_Ill_250bpfermikitraw_15289:HG4_Ill_GATKHCSBGrefine_7979:HG4_Ill_GATKHC_18524:HG4_Ill_SVrefine2DISCOVARDovetail_8266:HG4_Ill_manta_2756:HG4_PB_SVrefine2PBcRDovetail_5768;NumExactMatchSVs=12;ClusterMaxShiftDist=0.100917;ClusterMaxSizeDiff=0.0733945;ClusterMaxEditDist=0.223214;PBcalls=9;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=110;DistBack=39351;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=10:92404057-92404169;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=656.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:0|1:32:3:0:21:./.:15:0:2:12:0/1:35:20:./.:.:.:.:.:.
chr10	93500788	HG2_Ill_SpiralSDKrefine_2028	T	TAGCAAACCCTGGGGGATGGGCATCCCTGGCCATACCCCACTGCAGACATTTCCTCACCAAGCCCTCTGGGCTCTGCACAGTCTGGAGTCCTGCTCCTACCACCTCTCTAAGCAGCTCTCCCTGCCAGCTCAAGTGTCCGTGGGGGTCGTGGGGTCTCTTGCTGCCAGGATTCCAG	20	PASS	ClusterIDs=HG3_PB_pbsv_11204:HG3_PB_assemblyticsfalcon_3104:HG2_PB_pbsv_11493:HG2_PB_assemblyticsfalcon_3136:HG3_PB_HySA_17365:HG2_PB_HySA_20829:HG2_PB_SVrefine2PB10Xhap12_8329:HG4_PB_SVrefine2PBcRDovetail_5773:HG4_Ill_manta_2759:HG4_Ill_SVrefine2DISCOVARDovetail_8269:HG4_Ill_MetaSV_641:HG4_Ill_GATKHCSBGrefine_7984:HG4_Ill_250bpfermikitraw_15296:HG4_Ill_150bpfermikitraw_14680:HG3_PB_SVrefine2Falcon1Dovetail_6927:HG3_Ill_MetaSV_606:HG3_Ill_GATKHCSBGrefine_7668:HG2_Ill_SpiralSDKrefine_2028:HG2_Ill_SVrefine2DISCOVARplusDovetail_1598:HG2_Ill_MetaSV_619:HG2_Ill_GATKHCSBGrefine_7770:HG2_10X_SVrefine210Xhap12_8072:HG4_PB_SVrefine2Falcon1Dovetail_6976:HG2_PB_SVrefine2Falcon1plusDovetail_1385:HG2_PB_SVrefine2PBcRplusDovetail_1326:HG2_PB_PB10Xdip_4835:HG2_PB_PB10Xdip_4836:HG4_PB_pbsv_11503;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8072:HG2_Ill_GATKHCSBGrefine_7770:HG2_Ill_MetaSV_619:HG2_Ill_SVrefine2DISCOVARplusDovetail_1598:HG2_Ill_SpiralSDKrefine_2028:HG3_Ill_GATKHCSBGrefine_7668:HG3_Ill_MetaSV_606:HG3_PB_SVrefine2Falcon1Dovetail_6927:HG4_Ill_150bpfermikitraw_14680:HG4_Ill_250bpfermikitraw_15296:HG4_Ill_GATKHCSBGrefine_7984:HG4_Ill_MetaSV_641:HG4_Ill_SVrefine2DISCOVARDovetail_8269:HG4_Ill_manta_2759:HG4_PB_SVrefine2PBcRDovetail_5773;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0811594;ClusterMaxSizeDiff=0.074928;ClusterMaxEditDist=0.219101;PBcalls=15;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=175;DistBack=45197;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:93500789-93500790;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:42:0|1:21:1:2:37:0|1:20:0:1:22:0/1:18:11:./.:.:.:.:.:.
chr10	94734297	HG4_Ill_scalpel_10629	G	GCTCGTCTCCCTCTCCCGTCTCCCTCTCCCCACGGTCTCCCTCTCCCTCTCCCTCTCC	20	PASS	ClusterIDs=HG4_PB_HySA_16764:HG4_Ill_svaba_14433:HG3_Ill_svaba_14532:HG2_Ill_svaba_14369:HG2_PB_pbsv_11497:HG3_PB_HySA_17370:HG4_PB_pbsv_11509:HG4_Ill_svaba_14432:HG2_PB_SVrefine2Falcon1plusDovetail_1390:HG4_Ill_scalpel_10629:HG4_Ill_SVrefine2DISCOVARDovetail_8280:HG4_Ill_Krunchall_16050:HG4_Ill_GATKHC_18540:HG4_Ill_GATKHCSBGrefine_7992:HG3_Ill_svaba_14531:HG3_Ill_GATKHC_18422:HG3_Ill_250bpfermikitraw_14998:HG2_Ill_svaba_14368:HG2_Ill_Krunchall_15782;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_Krunchall_15782:HG2_Ill_svaba_14368:HG3_Ill_250bpfermikitraw_14998:HG3_Ill_GATKHC_18422:HG3_Ill_svaba_14531:HG4_Ill_GATKHCSBGrefine_7992:HG4_Ill_GATKHC_18540:HG4_Ill_Krunchall_16050:HG4_Ill_SVrefine2DISCOVARDovetail_8280:HG4_Ill_scalpel_10629:HG4_Ill_svaba_14432;NumExactMatchSVs=11;ClusterMaxShiftDist=0.144144;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.290598;PBcalls=5;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=43424;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=67;REFWIDENED=10:94734298-94734364;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:36:./.:36:12:9:26:./.:4:0:2:10:0/1:23:12:./.:.:.:.:.:.
chr10	94735580	HG3_Ill_GATKHCSBGrefine_7671	C	CCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCAGCCAGCCGCCCCGTCCGGGAAGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGAGGGGGGGTCAGCCCCCCGCCCGACCAGCTGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCTGCCAGCCGCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5370:HG3_PB_pbsv_11212:HG4_PB_pbsv_11510:HG2_PB_PB10Xdip_4841:HG4_Ill_GATKHCSBGrefine_7993:HG3_Ill_GATKHCSBGrefine_7671:HG2_Ill_GATKHCSBGrefine_7778:HG2_PB_pbsv_11498:HG2_PB_SVrefine2Falcon2Bionano_5528:HG2_PB_SVrefine2Falcon1plusDovetail_1391:HG2_PB_SVrefine2PBcRplusDovetail_1330:HG2_PB_SVrefine2PB10Xhap12_8333:HG2_Ill_SVrefine2DISCOVARplusDovetail_1610:HG4_PB_SVrefine2Falcon1Dovetail_6981:HG4_PB_SVrefine2PBcRDovetail_5777;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7778:HG3_Ill_GATKHCSBGrefine_7671:HG4_Ill_GATKHCSBGrefine_7993;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0315315;ClusterMaxSizeDiff=0.0311804;ClusterMaxEditDist=0.232662;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=225;DistBack=-144;DistForward=6598;DistMin=-144;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=258;REFWIDENED=10:94735458-94735715;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=660.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:79:1/1:1:46:1:35:./.:1:0:1:2:1/1:0:22:./.:.:.:.:.:.
chr10	95002496	HG2_PB_SVrefine2Falcon1plusDovetail_1392	T	TAAATGAAAGAAGCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6934:HG3_PB_pbsv_11214:HG4_PB_pbsv_11511:HG2_PB_pbsv_11499:HG4_PB_HySA_16768:HG4_Ill_GATKHCSBGrefine_7994:HG3_Ill_GATKHCSBGrefine_7672:HG2_Ill_MetaSV_622:HG2_Ill_GATKHCSBGrefine_7779:HG2_PB_HySA_20836:HG3_Ill_MetaSV_609:HG2_PB_PB10Xdip_4842:HG2_Ill_breakscan11_4208:HG3_PB_assemblyticsfalcon_3114:HG4_PB_SVrefine2Falcon1Dovetail_6982:HG3_PB_SVrefine2PBcRDovetail_5372:HG2_PB_SVrefine2PBcRplusDovetail_1331:HG2_PB_SVrefine2PB10Xhap12_8334:HG2_PB_SVrefine2Falcon2Bionano_5529:HG2_PB_SVrefine2Falcon1plusDovetail_1392;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1392:HG2_PB_SVrefine2Falcon2Bionano_5529:HG2_PB_SVrefine2PB10Xhap12_8334:HG2_PB_SVrefine2PBcRplusDovetail_1331:HG3_PB_SVrefine2PBcRDovetail_5372;NumExactMatchSVs=5;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.189369;PBcalls=14;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=305;DistBack=62847;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=10:95002497-95002509;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9967;PctRecOverlap=0.9837;SizeDiff=-1;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=662.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:22:0:13:1/1:0:8:0:11:1/1:0:15:1/1:1:60:.:.:.
chr10	95584893	HG3_Ill_SVrefine2DISCOVARDovetail_8490	C	TATATATATGTATATATATATATACACATATATATATGTATATATATATATACATATATATATATGTATATATATATGTATATATATATATACACACATATATATATATGTGTATATATATATATACATACATATGTGTATATATATATGTATATATATATACACATATATATGT	20	PASS	ClusterIDs=HG2_PB_pbsv_11501:HG2_PB_HySA_20843:HG4_PB_SVrefine2PBcRDovetail_5779:HG4_PB_HySA_16774:HG4_PB_SVrefine2Falcon1Dovetail_6984:HG3_PB_SVrefine2Falcon1Dovetail_6936:HG3_PB_HySA_17380:HG2_PB_SVrefine2Falcon2Bionano_5531:HG3_PB_SVrefine2PBcRDovetail_5375:HG3_Ill_manta_2654:HG3_Ill_SVrefine2DISCOVARDovetail_8490:HG3_PB_pbsv_11217:HG4_PB_pbsv_11514:HG3_Ill_MetaSV_611;NumClusterSVs=14;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_8490:HG3_Ill_manta_2654:HG3_PB_SVrefine2PBcRDovetail_5375;NumExactMatchSVs=3;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.277108;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=174;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:95584894-95584892;PctSeqSimilarity=0.9944;PctSizeSimilarity=0.9886;PctRecOverlap=0.9774;SizeDiff=-2;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=98;MatchId=663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:0|1:33:2:3:38:./.:0:18:3:4:0/1:8:4:./.:.:.:.:.:.
chr10	95941604	HG4_Ill_SVrefine2DISCOVARDovetail_8286	A	ATTGAGGCTGCAGTGAGGTAGGATCATGCCACTATGCTCCAGTCTGAATGATAGAGTGAGACCCTTTCTCTAAAATTTAAAATAACAAAAAGGAAAAAACATAACTTCACGAGATAACGCTGATGCTACCAACACACCAATAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1394:HG2_PB_pbsv_11503:HG2_PB_HySA_20849:HG4_PB_HySA_16780:HG4_PB_pbsv_11516:HG4_Ill_SVrefine2DISCOVARDovetail_8286:HG2_PB_SVrefine2Falcon2Bionano_5533;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1394:HG4_Ill_SVrefine2DISCOVARDovetail_8286:HG2_PB_SVrefine2Falcon2Bionano_5533;NumExactMatchSVs=3;ClusterMaxShiftDist=0.04811;ClusterMaxSizeDiff=0.0343643;ClusterMaxEditDist=0.156463;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=142;DistBack=2334;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=147;REFWIDENED=10:95941605-95941751;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=664.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:38:0|1:42:2:0:35:./.:4:0:1:13:0/1:14:18:./.:.:.:.:.:.
chr10	97208026	HG3_PB_SVrefine2Falcon1Dovetail_6939	AC	TGGAGGCAGAGGCAGGAGAATCACTTGAACTCGGGAGGCGGAGGTTGCAGTGAGCTGAGCTCGCACCACTGCACTCCAACCTGGGTGACAGAACAAGCCTCTGTCTCAAAAACAAAACAAACAAACAAAAAAAACAAAAAAACCCAGTCTGGTACTGGGTGCCATGGCTCGTACCTGCAATCCCAGCACTTGGGAGGCTGAGGCAGGCAGACTGCTTGAGTCTGGAGTTCAAGACCAGCCTAGGTAACATGGGGATGCCCTG	20	PASS	ClusterIDs=HG4_Ill_MetaSV_649:HG4_PB_pbsv_11519:HG3_PB_assemblyticsfalcon_3129:HG3_PB_SVrefine2Falcon1Dovetail_6939:HG2_PB_SVrefine2Falcon2Bionano_5536:HG2_10X_SVrefine210Xhap12_8086:HG2_PB_SVrefine2Falcon1plusDovetail_1397:HG2_PB_pbsv_11506;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6939:HG3_PB_assemblyticsfalcon_3129;NumExactMatchSVs=2;ClusterMaxShiftDist=0.063197;ClusterMaxSizeDiff=0.063197;ClusterMaxEditDist=0.158672;PBcalls=6;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=260;DistBack=-2;DistForward=19615;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:97208028-97208025;PctSeqSimilarity=0.9943;PctSizeSimilarity=0.9848;PctRecOverlap=0.9887;SizeDiff=-4;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=665.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:27:0|1:21:0:1:19:1|0:0:58:30:0:0/1:27:17:./.:.:.:.:.:.
chr10	97668524	HG2_PB_SVrefine2Falcon2Bionano_5538	T	TAAAAAACATTACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_17394:HG4_PB_pbsv_11520:HG3_PB_pbsv_11221:HG3_PB_assemblyticsfalcon_3131:HG2_Ill_breakscan11_4209:HG2_PB_HySA_20859:HG2_PB_pbsv_11507:HG4_PB_SVrefine2Falcon1Dovetail_6988:HG2_PB_SVrefine2PBcRplusDovetail_1336:HG2_PB_SVrefine2PB10Xhap12_8340:HG2_PB_SVrefine2Falcon2Bionano_5538:HG2_Ill_MetaSV_626:HG2_10X_SVrefine210Xhap12_8088:HG2_PB_SVrefine2Falcon1plusDovetail_1399:HG3_PB_SVrefine2Falcon1Dovetail_6940:HG2_PB_PB10Xdip_4847;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5538:HG2_PB_SVrefine2PB10Xhap12_8340:HG2_PB_SVrefine2PBcRplusDovetail_1336;NumExactMatchSVs=3;ClusterMaxShiftDist=0.127925;ClusterMaxSizeDiff=0.127925;ClusterMaxEditDist=0.171607;PBcalls=13;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=319;DistBack=236594;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=10:97668525-97668538;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=666.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:./.:0:0:0:2:./.:0:2:0:2:1/1:0:17:1/1:2:79:.:.:.
chr10	97745960	HG2_Ill_SVrefine2DISCOVARplusDovetail_1620	G	GGGGCATCACGGAACCTGCCAACATGAGATGTCTCCCCCAGACATCCAGCTTTAAAATTTCTCTCTTTTGTACTCTTTCCCTTTATTTCTCAGACCGGCCGACACTTAGGGAAATAGAAAAGAACCTACGTGAAATAACGTTGAATTATTGGGGGCGGGTTCCCCTGATAATTCAACGTGGGCTCTTTTCTATTTCCCTAAGCGTTGGCTGGTCTGAGAAATAAAGGGAAAGAGTACAAAAGAGAGAAACTTTAAAGCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6941:HG3_PB_HySA_17397:HG3_PB_pbsv_11222:HG2_PB_PB10Xdip_4848:HG4_PB_pbsv_11521:HG2_PB_HySA_20861:HG2_Ill_breakscan11_4210:HG4_Ill_manta_2762:HG4_Ill_MetaSV_650:HG4_Ill_GATKHCSBGrefine_8007:HG3_Ill_manta_2656:HG3_Ill_MetaSV_613:HG3_Ill_GATKHCSBGrefine_7684:HG2_Ill_manta_3259:HG2_Ill_GATKHCSBGrefine_7790:HG2_Ill_MetaSV_627:HG4_PB_HySA_16792:HG3_PB_HySA_17396:HG2_PB_pbsv_11508:HG4_PB_SVrefine2PBcRDovetail_5783:HG4_PB_SVrefine2Falcon1Dovetail_6989:HG3_PB_SVrefine2PBcRDovetail_5380:HG3_Ill_SVrefine2DISCOVARDovetail_8497:HG2_PB_SVrefine2PBcRplusDovetail_1337:HG2_PB_SVrefine2PB10Xhap12_8341:HG2_PB_SVrefine2Falcon2Bionano_5539:HG2_PB_SVrefine2Falcon1plusDovetail_1400:HG2_Ill_SVrefine2DISCOVARplusDovetail_1620:HG2_10X_SVrefine210Xhap12_8089;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8089:HG2_Ill_SVrefine2DISCOVARplusDovetail_1620:HG2_PB_SVrefine2Falcon1plusDovetail_1400:HG2_PB_SVrefine2Falcon2Bionano_5539:HG2_PB_SVrefine2PB10Xhap12_8341:HG2_PB_SVrefine2PBcRplusDovetail_1337:HG3_Ill_SVrefine2DISCOVARDovetail_8497:HG3_PB_SVrefine2PBcRDovetail_5380:HG4_PB_SVrefine2Falcon1Dovetail_6989:HG4_PB_SVrefine2PBcRDovetail_5783;NumExactMatchSVs=10;ClusterMaxShiftDist=0.047619;ClusterMaxSizeDiff=0.0433925;ClusterMaxEditDist=0.22179;PBcalls=16;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=258;DistBack=59362;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=170;REFWIDENED=10:97745961-97746130;PctSeqSimilarity=0.9743;PctSizeSimilarity=0.9612;PctRecOverlap=0.3822;SizeDiff=10;StartDistance=-155;EndDistance=-155;GTMatch=0;TruScore=77;MatchId=667.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:1:54:0:12:./.:1:15:0:1:0/1:4:18:./.:.:.:.:.:.
chr10	98175473	HG2_PB_SVrefine2PB10Xhap12_8342	G	GCTCTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTGTCTCTTTCTCTCTCTGTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTGTCTCTTTCTCTCTCTCTCTCTCTCTGTCTCTCTCTGTCTCTTTCTCTCTGTCTCTCTCTGTCTCTTTCTCTCTCTCTCTCTCTGTCTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTCTTTCTCTCTCTCTCTCTCTGTCTCTTTCTCTCTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5785:HG2_PB_pbsv_11510:HG2_PB_PB10Xdip_4849:HG3_PB_HySA_17402:HG3_PB_HySA_17401:HG4_PB_HySA_16798:HG4_PB_HySA_16797:HG4_PB_pbsv_11524:HG3_PB_pbsv_11224:HG2_PB_SVrefine2Falcon1plusDovetail_1401:HG3_PB_assemblyticsfalcon_3135:HG2_PB_SVrefine2Falcon2Bionano_5540:HG3_PB_SVrefine2PBcRDovetail_5381:HG4_PB_SVrefine2Falcon1Dovetail_6990:HG3_PB_SVrefine2Falcon1Dovetail_6942:HG2_PB_SVrefine2PBcRplusDovetail_1338:HG2_PB_SVrefine2PB10Xhap12_8342;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8342:HG2_PB_SVrefine2PBcRplusDovetail_1338;NumExactMatchSVs=2;ClusterMaxShiftDist=0.276336;ClusterMaxSizeDiff=0.276336;ClusterMaxEditDist=0.28858;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=646;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=10:98175474-98175529;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9784;SizeDiff=-2;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=99;MatchId=668.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:./.:0:0:0:0:./.:0:7:0:0:1/1:1:14:1/1:4:133:.:.:.
chr10	98198881	HG3_Ill_SVrefine2DISCOVARDovetail_8499	G	GGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAAGCTCCACCTCCCAGGTTCATGCCATTCTCCTGCCTCAGCCTCCCACATAGCTGGGACTACAGGCACCTGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCTGCCTGCCTCGGCCCCCCAAAGTGCTGGGATTACAGGAGTGGGCCACCACGCCCAGCCTTAGGGGTGTCTCTTACAAGCGGCAAACAGCTAGATTTTTTTTCTTGTTGTTCAACCTGAGAATCTTCTAACAGATGAATTACATTTATTTTATAACTGATATACCTGGACTTATTCCCTTCCTTTTGTTTTATGCTTTCTTTTATTCTTTTGTTTTCTTTTCCTTCTTTTATTCTCCTTTCCTGCTTTCTTATTAGATTAAGAAATTTTTCTATATTTACTTTTTATTTCCATTATGTGCTTTCTATTCTTTAATATTGCCTTTCATGTTTAACATTCATACTTGACTTTTTAAAGTATAAAGAATTAGTGAACTAAGAAGACAGATCTGGGCTGGGTGTGGTGGCTCATCCCTGTAATCCCAACACTTTGGGAGGCCGAGGCAGGAGGATCATGAGGTCAGGAGATCGAGACCATCCTGACTAACATAGTGAAACCCCATCTCTACTAAAAAATACAAAAACTTAGCCAGGCATGGTGGCAGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATGGCGTGAACCCGGGAGGCGGAGCTTGTAGTGAGCCGAGATCACACCACTGCACTCCAGCCTGAGCGACAGAGCAAGACTCCATCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGACAGATCTGAAGCCAGAAACCACAGCCTTGTTCTAAGAAATACAGGGTTTTTAAAATATTTTAATTTGTAAGACACCCTCCAATTTTTCATGTTATTATTTGCTTCCTTTCAAGACCCCAAATTAGTCACCATTATTGATGGCTTATTTGTGTTTGTTTGCAATACAGATTGATATCTGCCTTCATATCCATCCATTCCCTTGCTCACTGGTATTTCGTACATCTCATTTCTCCCTCCTGGAAATGCTTTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6991:HG4_PB_pbsv_11525:HG2_Ill_SVrefine2DISCOVARplusDovetail_1624:HG3_PB_HySA_17403:HG2_PB_PB10Xdip_4850:HG4_PB_HySA_16799:HG2_PB_HySA_20866:HG3_PB_SVrefine2Falcon1Dovetail_6943:HG4_PB_SVrefine2PBcRDovetail_5786:HG4_Ill_SVrefine2DISCOVARDovetail_8300:HG3_Ill_SVrefine2DISCOVARDovetail_8499:HG2_Ill_SVrefine2DISCOVARplusDovetail_1623:HG2_10X_SVrefine210Xhap12_8090:HG2_PB_SVrefine2PBcRplusDovetail_1339:HG2_PB_SVrefine2PB10Xhap12_8343:HG2_PB_SVrefine2Falcon2Bionano_5541:HG3_PB_SVrefine2PBcRDovetail_5382:HG2_PB_SVrefine2Falcon1plusDovetail_1402;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8090:HG2_Ill_SVrefine2DISCOVARplusDovetail_1623:HG3_Ill_SVrefine2DISCOVARDovetail_8499:HG4_Ill_SVrefine2DISCOVARDovetail_8300:HG4_PB_SVrefine2PBcRDovetail_5786;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0581297;ClusterMaxSizeDiff=0.0572873;ClusterMaxEditDist=0.165282;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1170;DistBack=23311;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=255;REFWIDENED=10:98198882-98199136;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.9983;PctRecOverlap=0.9445;SizeDiff=2;StartDistance=-64;EndDistance=-64;GTMatch=0;TruScore=97;MatchId=669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:82:1/1:0:36:0:30:./.:0:2:0:0:1/1:0:54:0/1:25:201:.:1136:.
chr10	98901493	HG2_Ill_Krunchall_15806	T	TGTATCGTATCGTATCGTATCGTATTGCATTGCATTGTATTGTATTGTATTGTATC	20	PASS	ClusterIDs=HG2_PB_HySA_20872:HG2_PB_pbsv_11512:HG3_Ill_svaba_14555:HG3_PB_pbsv_11226:HG3_Ill_GATKHC_18455:HG3_Ill_GATKHCSBGrefine_7688:HG3_Ill_250bpfermikitraw_15024:HG3_Ill_150bpfermikitraw_14568:HG2_Ill_svaba_14388:HG2_Ill_SpiralSDKrefine_2055:HG2_Ill_Krunchall_15806:HG2_Ill_GATKHC_18553:HG2_Ill_GATKHCSBGrefine_7793:HG2_Ill_250bpfermikitraw_15447:HG2_Ill_150bpfermikitraw_14540;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14540:HG2_Ill_250bpfermikitraw_15447:HG2_Ill_GATKHCSBGrefine_7793:HG2_Ill_GATKHC_18553:HG2_Ill_Krunchall_15806:HG2_Ill_SpiralSDKrefine_2055:HG2_Ill_svaba_14388:HG3_Ill_150bpfermikitraw_14568:HG3_Ill_250bpfermikitraw_15024:HG3_Ill_GATKHCSBGrefine_7688:HG3_Ill_GATKHC_18455:HG3_Ill_svaba_14555;NumExactMatchSVs=12;ClusterMaxShiftDist=0.102564;ClusterMaxSizeDiff=0.0854701;ClusterMaxEditDist=0.297521;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=171789;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=168;REFWIDENED=10:98901399-98901566;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=670.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:./.:24:20:0:1:./.:1:9:21:11:0/1:23:27:./.:.:.:.:.:.
chr10	100306895	HG2_PB_SVrefine2Falcon2Bionano_5551	T	TAAAAAGTCAGGAAACATACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAATGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5551:HG2_PB_pbsv_11523:HG4_PB_SVrefine2Falcon1Dovetail_6999:HG4_PB_pbsv_11537;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5551;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0552147;ClusterMaxSizeDiff=0.0490798;ClusterMaxEditDist=0.216216;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=158;DistBack=-869295;DistForward=0;DistMin=-869295;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=10:100306896-100306911;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9937;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=671.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:./.:16:11:12:11:./.:0:0:6:0:0/1:17:3:./.:.:.:.:.:.
chr10	101011255	HG2_Ill_SVrefine2DISCOVARplusDovetail_1644	G	GCATCACCTGATACCAAAACTTGGCAAAGACACAACCGAAAAAGACTACAGGACAATATCCCTAATGAACATAGATGCAAAAATCCTCAACAAAATA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_14555:HG3_PB_HySA_17427:HG3_PB_assemblyticsfalcon_3167:HG2_PB_pbsv_11526:HG3_PB_SVrefine2Falcon1Dovetail_6954:HG4_PB_pbsv_11540:HG2_PB_PB10Xdip_2892:HG2_PB_HySA_20894:HG3_PB_pbsv_11238:HG4_PB_HySA_16822:HG2_10X_SVrefine210Xhap12_8099:HG4_PB_SVrefine2Falcon1Dovetail_7002:HG4_Ill_SVrefine2DISCOVARDovetail_8312:HG4_Ill_Krunchall_16099:HG4_Ill_GATKHCSBGrefine_8022:HG4_Ill_250bpfermikitraw_15349:HG3_Ill_GATKHCSBGrefine_7703:HG3_Ill_250bpfermikitraw_15037:HG2_PB_SVrefine2PBcRplusDovetail_1350:HG2_PB_SVrefine2PB10Xhap12_8352:HG2_PB_SVrefine2Falcon2Bionano_5553:HG2_PB_SVrefine2Falcon1plusDovetail_1413:HG2_Ill_SVrefine2DISCOVARplusDovetail_1644:HG2_Ill_MetaSV_636:HG2_Ill_Krunchall_15820:HG2_Ill_GATKHCSBGrefine_7803:HG2_Ill_250bpfermikitraw_15460;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14555:HG4_PB_SVrefine2Falcon1Dovetail_7002:HG4_Ill_SVrefine2DISCOVARDovetail_8312:HG4_Ill_Krunchall_16099:HG4_Ill_GATKHCSBGrefine_8022:HG4_Ill_250bpfermikitraw_15349:HG3_Ill_GATKHCSBGrefine_7703:HG3_Ill_250bpfermikitraw_15037:HG2_PB_SVrefine2PBcRplusDovetail_1350:HG2_PB_SVrefine2PB10Xhap12_8352:HG2_PB_SVrefine2Falcon2Bionano_5553:HG2_PB_SVrefine2Falcon1plusDovetail_1413:HG2_Ill_SVrefine2DISCOVARplusDovetail_1644:HG2_Ill_MetaSV_636:HG2_Ill_Krunchall_15820:HG2_Ill_GATKHCSBGrefine_7803:HG2_Ill_250bpfermikitraw_15460;NumExactMatchSVs=17;ClusterMaxShiftDist=0.108374;ClusterMaxSizeDiff=0.108374;ClusterMaxEditDist=0.243902;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=96;DistBack=16423;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=97;REFWIDENED=10:101011256-101011352;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=672.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:51:./.:0:0:0:0:./.:2:13:0:0:1/1:0:35:./.:.:.:.:.:.
chr10	101016124	HG3_PB_SVrefine2Falcon1Dovetail_6955	A	ATGTGTAGGGGTGGGTTGCCCCTACACACCTGTGGGTGTTTCTCGTAAGGTGGGACGAGAGATTTGGAAAAGAAAAAGACACAGAGACAAAGTATAGAGAAAGAAATAAGGGGACCCGGGGAACCAGCGTTCAGCATATGGAGGATCCCCTTATTTCTTTCTCTATACTTTGTCTCTGTGTCTTTTTCTTTTCCAAATCTCTCGTCCCACCTTACGAGAAACACCCACAGG	20	PASS	ClusterIDs=HG4_PB_HySA_16823:HG4_PB_pbsv_11541:HG2_PB_HySA_20897:HG2_PB_HySA_20896:HG2_PB_pbsv_11527:HG4_PB_HySA_16824:HG3_PB_assemblyticsfalcon_3168:HG2_PB_assemblyticsfalcon_3202:HG2_PB_PB10Xdip_2893:HG2_Ill_breakscan11_4211:HG2_PB_HySA_20895:HG3_PB_SVrefine2PBcRDovetail_5395:HG4_PB_SVrefine2PBcRDovetail_5797:HG4_PB_SVrefine2Falcon1Dovetail_7003:HG4_Ill_MetaSV_656:HG4_Ill_GATKHCSBGrefine_8023:HG3_PB_SVrefine2Falcon1Dovetail_6955:HG3_Ill_SVrefine2DISCOVARDovetail_8512:HG3_Ill_MetaSV_621:HG3_Ill_GATKHCSBGrefine_7704:HG2_PB_SVrefine2PBcRplusDovetail_1351:HG2_PB_SVrefine2PB10Xhap12_8353:HG2_PB_SVrefine2Falcon2Bionano_5554:HG2_Ill_MetaSV_637:HG2_Ill_GATKHCSBGrefine_7804:HG2_10X_SVrefine210Xhap12_8100:HG3_Ill_manta_2660:HG2_PB_SVrefine2Falcon1plusDovetail_1414;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8100:HG2_Ill_GATKHCSBGrefine_7804:HG2_Ill_MetaSV_637:HG2_PB_SVrefine2Falcon2Bionano_5554:HG2_PB_SVrefine2PB10Xhap12_8353:HG2_PB_SVrefine2PBcRplusDovetail_1351:HG3_Ill_GATKHCSBGrefine_7704:HG3_Ill_MetaSV_621:HG3_Ill_SVrefine2DISCOVARDovetail_8512:HG3_PB_SVrefine2Falcon1Dovetail_6955:HG4_Ill_GATKHCSBGrefine_8023:HG4_Ill_MetaSV_656:HG4_PB_SVrefine2Falcon1Dovetail_7003:HG4_PB_SVrefine2PBcRDovetail_5797;NumExactMatchSVs=14;ClusterMaxShiftDist=0.122004;ClusterMaxSizeDiff=0.122004;ClusterMaxEditDist=0.174292;PBcalls=18;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=230;DistBack=4772;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=10:101016125-101016134;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:./.:0:0:0:7:./.:2:6:0:0:0/1:11:32:./.:.:.:.:.:.
chr10	101340248	HG2_PB_SVrefine2Falcon2Bionano_5555	G	GTTTGTTTGTTTTTTGAGACAGAGTTTTGCTCTTGTTGCCCAGGCCAGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCGGCCTCCCAGGCAACTGGGATTACAGGCATGCACCACCATGCCCAGTTAATTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTTAAACTCCTGACCTCAAGTGATCCACCCACTTCAGCCTCCCAAAATGCTGGGATTTCAGGTGTGAGCCACCACGTCCGGCCTGTCATCTGTATTTTTAAATGTGCTTCTGTTGATTCTAACATGCTGCCAAGGCTGGGAACCCCTGCTCTAGGGCTGTGCTGTCCAATATGGCAGCTGCTAGCCACATGTGCCTATTTAAACTTAGATTAATTAGCCAGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGATCTGGGTGGATCACCTGAGGTAAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCAGTCTCTACTAAAAATACAAATATCAGCCGGGCATGGTCACGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGTAACGAGGATCACTTGAACCTGGGAGGTGGAGGTTGCAGTGAGACGAGATCGTGCCACTGCACTCCTGCCTGGGCGAAAAGAGTGAGACCCCATCTCAAAAATAAATAAATAAATACATAAATAAACTTAGGTTAATTAACTAAAATTAAAAATTCACTTCTTCAGTCACACTAGCTACACTTGAAGTGCTCAGTAGCTGCCGATGACTAGTGGTTGCTGTATCGAACAGTGCAGGTATGGAACATTTCCATCATCATGGAGAATTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8101:HG4_PB_pbsv_11543:HG2_PB_pbsv_11528:HG2_PB_PB10Xdip_2894:HG3_PB_pbsv_11240:HG4_PB_HySA_16829:HG3_Ill_GATKHCSBGrefine_7706:HG2_Ill_MetaSV_638:HG2_Ill_GATKHCSBGrefine_7806:HG3_Ill_MetaSV_622:HG4_Ill_MetaSV_657:HG2_PB_assemblyticsfalcon_3206:HG4_PB_SVrefine2Falcon1Dovetail_7004:HG2_PB_SVrefine2Falcon1plusDovetail_1415:HG3_PB_assemblyticsfalcon_3169:HG3_Ill_SVrefine2DISCOVARDovetail_8515:HG3_PB_SVrefine2PBcRDovetail_5396:HG3_PB_SVrefine2Falcon1Dovetail_6956:HG4_PB_SVrefine2PBcRDovetail_5798:HG2_PB_SVrefine2PBcRplusDovetail_1352:HG4_Ill_SVrefine2DISCOVARDovetail_8315:HG2_PB_SVrefine2PB10Xhap12_8354:HG2_PB_SVrefine2Falcon2Bionano_5555:HG2_Ill_SVrefine2DISCOVARplusDovetail_1646;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8101:HG4_Ill_SVrefine2DISCOVARDovetail_8315:HG2_PB_SVrefine2PB10Xhap12_8354:HG2_PB_SVrefine2Falcon2Bionano_5555:HG2_Ill_SVrefine2DISCOVARplusDovetail_1646;NumExactMatchSVs=5;ClusterMaxShiftDist=0.230635;ClusterMaxSizeDiff=0.230635;ClusterMaxEditDist=0.29237;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=881;DistBack=5035;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=82;REFWIDENED=10:101340249-101340330;PctSeqSimilarity=0.9947;PctSizeSimilarity=0.9989;PctRecOverlap=0.9387;SizeDiff=1;StartDistance=-54;EndDistance=-54;GTMatch=0;TruScore=97;MatchId=674.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:21:0:10:./.:0:6:0:4:1/1:0:17:./.:14:140:.:.:.
chr10	101384909	HG4_Ill_SVrefine2DISCOVARDovetail_8316	A	AGTGAGTGTTACAGCCTTAAAGGTGGCGTGTCCGGAGTTGTTTGTTCCTCCCGGTGGATTCGTGGTCTCGCTGACTTCAGGAATGAAGCCGCAGACCCTTGCG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7005:HG3_PB_assemblyticsfalcon_3170:HG2_PB_assemblyticsfalcon_3208:HG2_PB_HySA_20906:HG2_PB_HySA_20905:HG4_PB_pbsv_11544:HG3_PB_pbsv_11241:HG2_PB_PB10Xdip_2895:HG4_PB_SVrefine2PBcRDovetail_5799:HG4_Ill_manta_2768:HG4_Ill_SVrefine2DISCOVARDovetail_8316:HG4_Ill_MetaSV_658:HG4_Ill_GATKHC_18605:HG4_Ill_GATKHCSBGrefine_8025:HG3_PB_SVrefine2PBcRDovetail_5397:HG3_PB_SVrefine2Falcon1Dovetail_6957:HG3_Ill_Spiral_12097:HG3_Ill_SVrefine2DISCOVARDovetail_8516:HG3_Ill_MetaSV_623:HG3_Ill_GATKHC_18480:HG3_Ill_GATKHCSBGrefine_7707:HG3_Ill_250bpfermikitraw_15041:HG3_Ill_150bpfermikitraw_14588:HG2_PB_SVrefine2PBcRplusDovetail_1353:HG2_PB_SVrefine2PB10Xhap12_8355:HG2_PB_SVrefine2Falcon2Bionano_5556:HG2_PB_SVrefine2Falcon1plusDovetail_1416:HG2_Ill_SpiralSDKrefine_2065:HG2_Ill_SVrefine2DISCOVARplusDovetail_1648:HG2_Ill_MetaSV_639:HG2_Ill_GATKHC_18574:HG2_Ill_GATKHCSBGrefine_7807:HG2_Ill_250bpfermikitraw_15466:HG2_Ill_150bpfermikitraw_14559:HG2_10X_SVrefine210Xhap12_8102;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8102:HG2_Ill_150bpfermikitraw_14559:HG2_Ill_250bpfermikitraw_15466:HG2_Ill_GATKHCSBGrefine_7807:HG2_Ill_GATKHC_18574:HG2_Ill_MetaSV_639:HG2_Ill_SVrefine2DISCOVARplusDovetail_1648:HG2_Ill_SpiralSDKrefine_2065:HG2_PB_SVrefine2Falcon1plusDovetail_1416:HG2_PB_SVrefine2Falcon2Bionano_5556:HG2_PB_SVrefine2PB10Xhap12_8355:HG2_PB_SVrefine2PBcRplusDovetail_1353:HG3_Ill_150bpfermikitraw_14588:HG3_Ill_250bpfermikitraw_15041:HG3_Ill_GATKHCSBGrefine_7707:HG3_Ill_GATKHC_18480:HG3_Ill_MetaSV_623:HG3_Ill_SVrefine2DISCOVARDovetail_8516:HG3_Ill_Spiral_12097:HG3_PB_SVrefine2Falcon1Dovetail_6957:HG3_PB_SVrefine2PBcRDovetail_5397:HG4_Ill_GATKHCSBGrefine_8025:HG4_Ill_GATKHC_18605:HG4_Ill_MetaSV_658:HG4_Ill_SVrefine2DISCOVARDovetail_8316:HG4_Ill_manta_2768:HG4_PB_SVrefine2PBcRDovetail_5799;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0574163;ClusterMaxSizeDiff=0.0478469;ClusterMaxEditDist=0.171429;PBcalls=15;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=102;DistBack=45;DistForward=20;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=86;REFWIDENED=10:101384846-101384931;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=675.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:66:1/1:1:28:2:22:./.:0:18:1:6:1/1:0:23:./.:.:.:.:.:.
chr10	101587731	HG2_PB_SVrefine2PBcRplusDovetail_1354	G	GCCCCTCCACACCTGTGGGTGTTTCTCGTAAGGTGGAATGAGAGACTTAGGAAAGAAAAAGACACAGAGACAAAGTATAGAAATAAGGGGATCCTCCATATGCTGAACGCTGGTTCCCCGGGTCCCCTTATTTCTATACTTTGTCTCTGTGTCTTTTTCTTTCCTAAGTCTCTCGTTCCACCTTACGAGAAACACCCACAGGTGTGGAGGGGCAACCCA	20	PASS	ClusterIDs=HG2_PB_HySA_20911:HG4_PB_pbsv_11546:HG3_PB_pbsv_11243:HG2_PB_pbsv_11531:HG4_PB_HySA_16832:HG3_PB_HySA_17439:HG3_Ill_MetaSV_624:HG2_Ill_MetaSV_640:HG2_Ill_GATKHCSBGrefine_7809:HG4_Ill_MetaSV_659:HG4_Ill_GATKHCSBGrefine_8027:HG3_Ill_GATKHCSBGrefine_7709:HG2_PB_HySA_20912:HG2_PB_PB10Xdip_2896:HG3_PB_SVrefine2Falcon1Dovetail_6958:HG4_PB_SVrefine2Falcon1Dovetail_7006:HG4_PB_SVrefine2PBcRDovetail_5800:HG3_PB_SVrefine2PBcRDovetail_5398:HG2_PB_SVrefine2PBcRplusDovetail_1354:HG2_PB_SVrefine2PB10Xhap12_8356:HG2_PB_SVrefine2Falcon2Bionano_5557:HG2_PB_SVrefine2Falcon1plusDovetail_1417:HG2_Ill_SVrefine2DISCOVARplusDovetail_1649:HG3_Ill_SVrefine2DISCOVARDovetail_8518;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1649:HG2_PB_SVrefine2Falcon1plusDovetail_1417:HG2_PB_SVrefine2Falcon2Bionano_5557:HG2_PB_SVrefine2PB10Xhap12_8356:HG2_PB_SVrefine2PBcRplusDovetail_1354:HG3_PB_SVrefine2PBcRDovetail_5398:HG4_PB_SVrefine2PBcRDovetail_5800;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0767494;ClusterMaxSizeDiff=0.0677201;ClusterMaxEditDist=0.186253;PBcalls=16;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=218;DistBack=13244;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=10:101587732-101587745;PctSeqSimilarity=0.9978;PctSizeSimilarity=1;PctRecOverlap=0.9726;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=676.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:81:1/1:0:13:0:16:./.:3:6:2:3:0/1:12:36:./.:.:.:.:.:.
chr10	103048086	HG4_Ill_manta_2769	GG	CTTACTTTGGCAAATTGTTGGAGCATTGGTTGATCATTTACTTGGTGATCTGTGCTGAACACTTTATAAAGGACACCACCTTATTTGATCCTTTTAACAACCGCACAAGGTAGGTATTATTGTTGTTCCCAATTTTCGGATGAGGAAATGGGCCACACAAGTTACACAACATACCCAAGTTCATACCAGCTAAGAAGTGACAGAGTCAGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAAGCGGGCAGATCACCTGAGGTCAGAAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCCCGTCTCCACTAAAAATACAAAAAAAAATTAGCCAGGCGTGGTGGCGTATGCCTGTAGTCCCAGCCACTTGGGAAGCTGAGGCAGGAGAATCACTTGAACCTGGGAAGCAGAGGTTGCAGTGAGCAGAGATCGCACCATTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGAAAAAAGAAAAAAAATAAGTAACAGAACCGGGCTTCAAACTCAGGACTCTGTTTGCAGAACCTACAACTTAACCATTTTGCTAAGCTGTCTGTATGGATCTCTCTGGGTTGTTACTGGAGTCTAGTTAAACAGGTAGGCTTAGTTCTGGGATCCTTTGGCCCTCAATCTCCCAGGCTACAGAATGGGCCTGCTGTGGCCTCTCAT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_641:HG3_PB_HySA_17447:HG4_PB_HySA_16837:HG2_PB_assemblyticsfalcon_3226:HG2_PB_SVrefine2Falcon2Bionano_5561:HG2_PB_SVrefine2Falcon1plusDovetail_1422:HG4_Ill_SVrefine2DISCOVARDovetail_8318:HG2_PB_SVrefine2PBcRplusDovetail_1361:HG2_Ill_SVrefine2DISCOVARplusDovetail_1651:HG2_10X_SVrefine210Xhap12_8107:HG3_PB_SVrefine2PBcRDovetail_5402:HG4_PB_SVrefine2PBcRDovetail_5803:HG4_PB_SVrefine2Falcon1Dovetail_7011:HG4_Ill_manta_2769:HG3_PB_SVrefine2Falcon1Dovetail_6964:HG3_Ill_SVrefine2DISCOVARDovetail_8522:HG4_PB_pbsv_11552:HG3_PB_pbsv_11257:HG2_Ill_Spiral_803:HG4_Ill_Spiral_943:HG3_Ill_Spiral_12108:HG2_PB_pbsv_11540:HG4_Ill_MetaSV_662:HG3_Ill_MetaSV_626;NumClusterSVs=24;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_8522:HG3_PB_SVrefine2Falcon1Dovetail_6964:HG4_Ill_manta_2769:HG4_PB_SVrefine2Falcon1Dovetail_7011:HG4_PB_SVrefine2PBcRDovetail_5803;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0400276;ClusterMaxSizeDiff=0.0358868;ClusterMaxEditDist=0.186015;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=712;DistBack=-1;DistForward=27185;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:103048088-103048085;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9986;PctRecOverlap=0.9958;SizeDiff=-1;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=99;MatchId=679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:37:0:31:1/1:0:17:0:19:1/1:0:22:1/1:4:116:.:.:.
chr10	103488450	HG2_Ill_SVrefine2DISCOVARplusDovetail_1655	C	CGGGTGCAGTGGCTCATGCTTGTAATCCCAGCACTTTGGGAGACCAAGGCAGGTGGATCACTTGAGGTCAGGAGCTTGAGACCAGTCTGGCCAACATGGTGAAAACCCATCTCTACCAAAAATACAAAAAAGTTAGTGGGGTGTGGTGGTGCATACCTGTAATCCCAGACACTCAGGAGGCTGTGGTGGGAGGATTGCTTGAATCTGGGAGGTAGAGGTTGCAATGAACCGGGATGGTGCCTCTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGATTACAGGCACATGCCACCACACCCAACTAATTTTTGTATTTTTAGTAGAGACGCTTTCACCATGTTGGCCAGGATGGTCTTGAACTCCTGACCTCAAGTGATCCACCTGCCTCAGCCTCCCAAAGTGTTGGGATTACAGACGAGAGCCACTGCGTCCCGCCAAAAGTTTTTTTTAATTAAAAAAATAATAATAGAGTGCTACTAATCTATCATTTAAGATATTAGGAATATGTTTAGAAAGATGTAGAATGGGCT	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_8321:HG3_Ill_Spiral_12114:HG2_Ill_Spiral_804:HG4_Ill_Spiral_944:HG3_Ill_MetaSV_628:HG3_PB_pbsv_11260:HG2_PB_HySA_20932:HG2_Ill_MetaSV_643:HG4_Ill_manta_2771:HG4_Ill_MetaSV_663:HG4_Ill_GATKHCSBGrefine_8034:HG3_Ill_manta_2662:HG3_Ill_GATKHCSBGrefine_7713:HG2_Ill_manta_3266:HG2_Ill_GATKHCSBGrefine_7817:HG3_PB_HySA_17452:HG4_PB_HySA_16840:HG2_Ill_breakscan11_4213:HG4_PB_pbsv_11555:HG2_PB_pbsv_11544:HG4_PB_SVrefine2PBcRDovetail_5805:HG2_PB_assemblyticsfalcon_3231:HG4_PB_SVrefine2Falcon1Dovetail_7014:HG3_PB_SVrefine2PBcRDovetail_5405:HG3_PB_SVrefine2Falcon1Dovetail_6967:HG3_Ill_SVrefine2DISCOVARDovetail_8528:HG2_PB_SVrefine2PBcRplusDovetail_1363:HG2_PB_SVrefine2Falcon2Bionano_5563:HG2_Ill_SVrefine2DISCOVARplusDovetail_1655:HG2_10X_SVrefine210Xhap12_8111:HG2_PB_SVrefine2Falcon1plusDovetail_1425;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8111:HG2_Ill_SVrefine2DISCOVARplusDovetail_1655:HG2_PB_SVrefine2Falcon2Bionano_5563:HG2_PB_SVrefine2PBcRplusDovetail_1363:HG3_Ill_SVrefine2DISCOVARDovetail_8528:HG3_PB_SVrefine2Falcon1Dovetail_6967:HG3_PB_SVrefine2PBcRDovetail_5405:HG4_PB_SVrefine2Falcon1Dovetail_7014:HG4_PB_SVrefine2PBcRDovetail_5805;NumExactMatchSVs=9;ClusterMaxShiftDist=0.183636;ClusterMaxSizeDiff=0.183636;ClusterMaxEditDist=0.250909;PBcalls=14;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=558;DistBack=13598;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=10:103488451-103488490;PctSeqSimilarity=0.9983;PctSizeSimilarity=1;PctRecOverlap=0.966;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=98;MatchId=680.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:71:1/1:0:31:0:20:1/1:0:12:0:11:1/1:0:27:1/1:2:97:.:.:.
chr10	103614823	HG2_PB_SVrefine2Falcon1plusDovetail_1426	T	TTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTCGCCCAGGCTGGACTGGAACGGCGCGATCTCGGCTGACTGCAACCTCCACCTCCCAGGTTCAAGCAACTATCCCGCCTCAGCATCCTGAGTAGCTGGGATTATAGGTGCACACCACCATGCTGGCTAATTTTTTTTTGTTATTTTTAGTAGGGATGGGGTTTCACCATGTTGGCCAGGCTAGTCTCAAACTCCTGACCTCATGATCCGCCCGCCTCAGCCTTCCAAAGTGCTGGGATAACAGGCGTGAGCCACTGCACCAGGTTAACATTGTCTATGCAATGTGAAAGCAAGCTTCCCACAATGACCTCACCACTCTCAGTGTAACTAGCAAGGCATCAGCCAGAACTCAGAGAATGGCCAGTATAACTTTGGTAGTGCAAAGTGACACAGGTTATACTAAAGAAAAACTAAGCAAAGAGGCCTGGCTTTGCATGATGCAGGTTGTGAGGCTGTTGGCCACATCAGGATCAGGATGTCTTCAAGACAGGAAGTAGATGAGATCCCAGTGAACAAGGTTAGTTCAAAATTGCTGACAAGGTTTCAGACACATACACACCCTAGCACACATAATATGCATTCCTCACAGACTATTCAGTACCCTGTGCTCCATTTATTTCAGCAAGGCCTTTGAAACACAAAATAAATTCTACCCTGAAGGTAGCAGCGGCAAAACAAGAATCACCAACATGGAAAAGTTCCTGGCAATGGCTATTCAGTCTCAATGCCAGAGGGCTTTGCCTTGTGCCTGAAAAATTACTCCGTTTCGAATCTCTGTTGACCTGAATTCCCAGCAGAATAACAGTGAGAGGACACCTAAATAATAGGATGTGACCTGACAGCAAACTTGTGTTCATTACTTTCTTCTCAATTTAAGCTGACATCTACAGTTTAACCTGTTTGGGGAAAACATGTGAGGCTGCCACCAGCCCTCTCCCAACCAGGGCAACATGTATGGTCTTTCCTAGGGGCCAGGCTGCCAGATGAGGCTGAGACCACAAGATACTAACAGAGAAGCTTACAGAGACTTCTTACAGAATAGGAAGTAAACCAGGAACCTAACAGGATGGTAGTGGGGAATAAAGAGGCTATGAAATCAGAAACCTAGGTTCAAATTTTGAACCATCATTTACTAGTTACATGACTTTGACCTGGGTTTCAGTTTCCTTAATGGTGAAATAGTCCTAATACTATCTTCTCATAACATTATGAAGATTAGAGATAGTATACAAAATAAATATTTAAAAAAATGATAGGGCCTAGCAAATAGGAGGTGCCCAATGGATGAAGGCTATTGAGATGGAAACAAATAGAAAAAACGGAAATAGAAAATGGAAGTATCTGATGTGAGGGAGGGGAAAAAAGAAAAAGTGTCTGATGTATTCAAATAAAATGAATCAGCTGGTTACATGGTAGCCAGGAGGGCCTGGAGTTATTCCTTGCATCTGAGGACAGTGATATGGAAAATCATACC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_8529:HG3_PB_pbsv_11261:HG2_PB_HySA_20933:HG2_PB_SVrefine2PBcRplusDovetail_1364:HG2_PB_SVrefine2Falcon1plusDovetail_1426:HG4_PB_SVrefine2PBcRDovetail_5806:HG4_Ill_SVrefine2DISCOVARDovetail_8322:HG2_10X_SVrefine210Xhap12_8113:HG4_PB_SVrefine2Falcon1Dovetail_7015:HG3_PB_SVrefine2PBcRDovetail_5406:HG2_PB_SVrefine2Falcon2Bionano_5564:HG4_PB_HySA_16841:HG3_PB_SVrefine2Falcon1Dovetail_6968:HG2_10X_SVrefine210Xhap12_8112;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1426:HG2_PB_SVrefine2PBcRplusDovetail_1364;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0255486;ClusterMaxSizeDiff=0.0255486;ClusterMaxEditDist=0.130847;PBcalls=10;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=1511;DistBack=24455;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=289;REFWIDENED=10:103614824-103615112;PctSeqSimilarity=0.999;PctSizeSimilarity=0.998;PctRecOverlap=0.9974;SizeDiff=-3;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:32:0:24:1/1:0:6:1:8:1/1:1:20:./.:15:199:.:1523:.
chr10	103735757	HG3_PB_SVrefine2Falcon1Dovetail_6969	C	CAAAAAATTAGCGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAACTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCCTCCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7016:HG4_PB_pbsv_11558:HG2_PB_assemblyticsfalcon_3233:HG4_PB_HySA_16842:HG2_PB_SVrefine2Falcon1plusDovetail_1427:HG3_PB_SVrefine2Falcon1Dovetail_6969:HG2_PB_pbsv_11546:HG4_PB_SVrefine2PBcRDovetail_5807;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6969;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0747384;ClusterMaxSizeDiff=0.0747384;ClusterMaxEditDist=0.178886;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=321;DistBack=-15;DistForward=31158;DistMin=-15;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:103735758-103735772;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9757;PctRecOverlap=0.9757;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=682.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:15:0|1:25:5:1:8:./.:9:0:0:2:0/1:9:5:0/1:3:19:.:.:.
chr10	103795963	HG3_Ill_GATKHC_18506	A	AGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGTCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1428:HG3_PB_SVrefine2Falcon1Dovetail_6970:HG4_PB_pbsv_11559:HG4_PB_SVrefine2PBcRDovetail_5808:HG2_PB_pbsv_11547:HG4_Ill_GATKHCSBGrefine_8035:HG3_Ill_GATKHC_18506:HG3_Ill_GATKHCSBGrefine_7714:HG2_Ill_GATKHCSBGrefine_7818:HG3_PB_pbsv_11262:HG2_PB_SVrefine2PBcRplusDovetail_1365:HG2_PB_SVrefine2Falcon2Bionano_5565:HG4_PB_SVrefine2Falcon1Dovetail_7017;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7818:HG3_Ill_GATKHCSBGrefine_7714:HG3_Ill_GATKHC_18506:HG4_Ill_GATKHCSBGrefine_8035:HG4_PB_SVrefine2PBcRDovetail_5808;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0875912;ClusterMaxSizeDiff=0.064982;ClusterMaxEditDist=0.278388;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=142;DistBack=-110;DistForward=87;DistMin=-110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=253;REFWIDENED=10:103795822-103796074;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=683.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:37:1/1:2:13:1:16:./.:5:1:2:1:1/1:1:18:./.:.:.:.:.:.
chr10	104889290	HG4_PB_SVrefine2Falcon1Dovetail_7023	C	CAGCCCCCGCCGGCCAGCCGCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCGCCCGGCGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGCGCCTCTGCCCGGTGCCCCTACTGGGAAGTGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1369:HG3_PB_SVrefine2Falcon1Dovetail_6976:HG4_PB_pbsv_11565:HG2_PB_pbsv_11555:HG4_PB_SVrefine2Falcon1Dovetail_7023:HG4_PB_SVrefine2PBcRDovetail_5812;NumClusterSVs=6;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_7023;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0864553;ClusterMaxSizeDiff=0.074928;ClusterMaxEditDist=0.174157;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=166;DistBack=19362;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=268;REFWIDENED=10:104889291-104889558;PctSeqSimilarity=0.9696;PctSizeSimilarity=0.9222;PctRecOverlap=0.4696;SizeDiff=-14;StartDistance=-89;EndDistance=-89;GTMatch=0;TruScore=78;MatchId=684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:40:0|1:23:3:2:33:./.:1:0:1:0:0/0:26:0:./.:.:.:.:.:.
chr10	105817197	HG3_PB_SVrefine2PBcRDovetail_5413	T	TAAAAGATTGCCTCCTTCGGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAACCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_648:HG2_PB_PB10Xdip_2915:HG3_PB_pbsv_11274:HG4_PB_pbsv_11574:HG2_PB_HySA_20961:HG2_PB_pbsv_11562:HG4_PB_HySA_16857:HG2_PB_assemblyticsfalcon_3253:HG4_PB_SVrefine2PBcRDovetail_5818:HG2_PB_SVrefine2Falcon2Bionano_5575:HG4_Ill_SVrefine2DISCOVARDovetail_8331:HG4_Ill_MetaSV_669:HG3_PB_SVrefine2PBcRDovetail_5413:HG3_Ill_SVrefine2DISCOVARDovetail_8540:HG3_Ill_MetaSV_632:HG3_Ill_GATKHCSBGrefine_7726:HG2_PB_SVrefine2PBcRplusDovetail_1376:HG2_PB_SVrefine2PB10Xhap12_8362:HG2_Ill_SVrefine2DISCOVARplusDovetail_1668:HG2_Ill_GATKHCSBGrefine_7825:HG4_PB_SVrefine2Falcon1Dovetail_7031:HG3_PB_SVrefine2Falcon1Dovetail_6983:HG2_PB_SVrefine2Falcon1plusDovetail_1437:HG2_10X_SVrefine210Xhap12_8120:HG3_PB_HySA_17472:HG2_Ill_breakscan11_4214;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7825:HG2_Ill_SVrefine2DISCOVARplusDovetail_1668:HG2_PB_SVrefine2PB10Xhap12_8362:HG2_PB_SVrefine2PBcRplusDovetail_1376:HG3_Ill_GATKHCSBGrefine_7726:HG3_Ill_MetaSV_632:HG3_Ill_SVrefine2DISCOVARDovetail_8540:HG3_PB_SVrefine2PBcRDovetail_5413:HG4_Ill_MetaSV_669:HG4_Ill_SVrefine2DISCOVARDovetail_8331;NumExactMatchSVs=10;ClusterMaxShiftDist=0.205263;ClusterMaxSizeDiff=0.205263;ClusterMaxEditDist=0.294737;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=195;DistBack=1955;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=10:105817198-105817214;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=685.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:0:26:1:18:1/1:0:9:0:6:1/1:0:16:./.:.:.:.:.:.
chr10	106855454	HG2_PB_PB10Xdip_2916	GCAGT	GCATAAAGAGATATGTCGGGGCGGTGGCTCACGCTGTATCCAGCACTTTGGAGCGAGGCGGCGATCACGAGTCAGGAGATCGAGACCATCCGGCTAAACGGTGAAACCCGTCTCTACTAAAATACAAAAATTAGCGGCGTAGTGGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCGGGAGCGGAGCTTGCAGTGAGCGAGATCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_20974:HG3_PB_HySA_17482:HG3_PB_pbsv_11277:HG4_PB_pbsv_11578:HG2_PB_pbsv_11566:HG3_PB_SVrefine2PBcRDovetail_5415:HG2_PB_SVrefine2Falcon1plusDovetail_1440:HG3_PB_SVrefine2Falcon1Dovetail_6986:HG4_PB_SVrefine2PBcRDovetail_5821:HG4_PB_SVrefine2Falcon1Dovetail_7034:HG2_PB_HySA_20975:HG2_PB_SVrefine2PB10Xhap12_8364:HG2_Ill_MetaSV_650:HG2_PB_PB10Xdip_2916;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_2916:HG2_PB_SVrefine2PB10Xhap12_8364;NumExactMatchSVs=2;ClusterMaxShiftDist=0.194305;ClusterMaxSizeDiff=0.190955;ClusterMaxEditDist=0.239601;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=281;DistBack=-5;DistForward=12;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:106855459-106855456;PctSeqSimilarity=0.9433;PctSizeSimilarity=0.8978;PctRecOverlap=0.9105;SizeDiff=-32;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=91;MatchId=686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:36:0|1:28:2:1:36:./.:1:5:33:0:0/0:23:0:./.:.:.:.:.:.
chr10	107891546	HG2_Ill_manta_3270	T	TGGAGCACACGTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCG	20	PASS	ClusterIDs=HG2_PB_pbsv_11570:HG2_PB_PB10Xdip_2918:HG4_PB_pbsv_11581:HG3_PB_pbsv_11281:HG3_PB_HySA_17486:HG4_PB_SVrefine2PBcRDovetail_5824:HG4_PB_SVrefine2Falcon1Dovetail_7036:HG2_PB_HySA_20989:HG4_PB_HySA_16874:HG2_PB_SVrefine2Falcon1plusDovetail_1443:HG4_Ill_manta_2775:HG4_Ill_SVrefine2DISCOVARDovetail_8337:HG4_Ill_MetaSV_672:HG4_Ill_GATKHCSBGrefine_8048:HG3_PB_SVrefine2PBcRDovetail_5418:HG3_PB_SVrefine2Falcon1Dovetail_6989:HG3_Ill_SVrefine2DISCOVARDovetail_8545:HG3_Ill_MetaSV_636:HG3_Ill_GATKHCSBGrefine_7733:HG2_PB_SVrefine2PBcRplusDovetail_1380:HG2_PB_SVrefine2PB10Xhap12_8365:HG2_PB_SVrefine2Falcon2Bionano_5578:HG2_Ill_manta_3270:HG2_Ill_SVrefine2DISCOVARplusDovetail_1675:HG2_Ill_MetaSV_652:HG2_Ill_GATKHCSBGrefine_7832:HG2_10X_SVrefine210Xhap12_8127;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8127:HG2_Ill_GATKHCSBGrefine_7832:HG2_Ill_MetaSV_652:HG2_Ill_SVrefine2DISCOVARplusDovetail_1675:HG2_Ill_manta_3270:HG2_PB_SVrefine2Falcon2Bionano_5578:HG2_PB_SVrefine2PB10Xhap12_8365:HG2_PB_SVrefine2PBcRplusDovetail_1380:HG3_Ill_GATKHCSBGrefine_7733:HG3_Ill_MetaSV_636:HG3_Ill_SVrefine2DISCOVARDovetail_8545:HG3_PB_SVrefine2Falcon1Dovetail_6989:HG3_PB_SVrefine2PBcRDovetail_5418:HG4_Ill_GATKHCSBGrefine_8048:HG4_Ill_MetaSV_672:HG4_Ill_SVrefine2DISCOVARDovetail_8337:HG4_Ill_manta_2775;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0563847;ClusterMaxEditDist=0.24026;PBcalls=15;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=293;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:107891547-107891561;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=687.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:65:1/1:0:8:0:8:./.:0:1:0:1:1/1:0:24:./.:.:.:.:.:.
chr10	108251937	HG2_PB_SVrefine2PBcRplusDovetail_1384	C	CATAATATATATTTATATATTAAGTATATATAATATATATTTATATATTAAGTATATATAATATATATTTATATATTAAGTATATATAATATATATTTATATATTAAGTATAT	20	PASS	ClusterIDs=HG3_PB_pbsv_11286:HG3_PB_SVrefine2Falcon1Dovetail_6993:HG3_PB_assemblyticsfalcon_3233:HG2_PB_assemblyticsfalcon_3277:HG2_PB_SVrefine2Falcon1plusDovetail_1446:HG2_PB_SVrefine2Falcon2Bionano_5582:HG2_PB_pbsv_11574:HG4_PB_SVrefine2PBcRDovetail_5827:HG4_PB_SVrefine2Falcon1Dovetail_7039:HG4_Ill_SVrefine2DISCOVARDovetail_8341:HG4_Ill_GATKHCSBGrefine_8054:HG3_Ill_GATKHC_18548:HG3_Ill_GATKHCSBGrefine_7738:HG2_PB_SVrefine2PBcRplusDovetail_1384:HG2_Ill_SVrefine2DISCOVARplusDovetail_1680:HG2_Ill_GATKHC_18641:HG2_Ill_GATKHCSBGrefine_7838:HG4_PB_pbsv_11585:HG4_PB_HySA_16878:HG2_PB_HySA_20994:HG4_Ill_250bpfermikitraw_15402:HG4_Ill_150bpfermikitraw_14780:HG2_Ill_250bpfermikitraw_15515:HG2_Ill_150bpfermikitraw_14613;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7838:HG2_Ill_GATKHC_18641:HG2_Ill_SVrefine2DISCOVARplusDovetail_1680:HG2_PB_SVrefine2PBcRplusDovetail_1384:HG3_Ill_GATKHCSBGrefine_7738:HG3_Ill_GATKHC_18548:HG4_Ill_GATKHCSBGrefine_8054:HG4_Ill_SVrefine2DISCOVARDovetail_8341:HG4_PB_SVrefine2Falcon1Dovetail_7039:HG4_PB_SVrefine2PBcRDovetail_5827;NumExactMatchSVs=10;ClusterMaxShiftDist=0.127273;ClusterMaxSizeDiff=0.127273;ClusterMaxEditDist=0.269565;PBcalls=13;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=112;DistBack=-1;DistForward=20;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=140;REFWIDENED=10:108251840-108251979;PctSeqSimilarity=0.9868;PctSizeSimilarity=0.9739;PctRecOverlap=0.6696;SizeDiff=-3;StartDistance=37;EndDistance=37;GTMatch=0;TruScore=87;MatchId=688.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:./.:7:17:1:18:./.:3:9:2:11:1/1:2:44:./.:.:.:.:.:.
chr10	108980661	HG3_PB_pbsv_11287	A	ATACGCCGGGCGCGTGGCTCAACGCTGTAATCCCAGCACTTTGCCGAGGCCCTGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCGATATACCGTCTCTACTTTAAAAATACAAAAATTATGTCGGGCATGGGACGCGCGGCCGCCTGTAGTTCGCAAGCTACTTGGGAGGCTGAGGCATTTGAGAATGGCGTGAACCGGGAGGCGAGCTTGCTTCGGAATCGCGCCCTGCGCTCCCAGCGAGCGCGACAGAGCCGAACTCCGTTCTCAAAAAAAAAAAAAAAATATAAACAAAAAAAAATTACATAACC	20	PASS	ClusterIDs=HG2_PB_HySA_21001:HG2_PB_pbsv_11575:HG2_PB_assemblyticsfalcon_3283:HG3_PB_assemblyticsfalcon_3237:HG3_PB_SVrefine2Falcon1Dovetail_6994:HG3_PB_pbsv_11287:HG2_Ill_breakscan11_4215:HG2_PB_SVrefine2Falcon1plusDovetail_1447:HG2_PB_SVrefine2Falcon2Bionano_5583;NumClusterSVs=9;ExactMatchIDs=HG3_PB_pbsv_11287;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0955414;ClusterMaxSizeDiff=0.0955414;ClusterMaxEditDist=0.254372;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=53019;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=10:108980662-108980661;PctSeqSimilarity=0.9149;PctSizeSimilarity=0.9938;PctRecOverlap=0.9567;SizeDiff=2;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=95;MatchId=689.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:40:0|1:35:6:7:31:0|1:19:0:0:7:0/1:28:9:0/1:4:15:.:.:.
chr10	108991268	HG2_Ill_GATKHCSBGrefine_7839	T	TGCATATTACACATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4216:HG4_PB_pbsv_11586:HG3_PB_pbsv_11288:HG2_PB_pbsv_11576:HG2_PB_assemblyticsfalcon_3284:HG3_PB_assemblyticsfalcon_3238:HG3_PB_HySA_17492:HG2_PB_HySA_21002:HG3_PB_SVrefine2PBcRDovetail_5422:HG2_Ill_MetaSV_656:HG3_Ill_MetaSV_640:HG3_Ill_GATKHCSBGrefine_7739:HG2_Ill_GATKHCSBGrefine_7839:HG2_PB_SVrefine2Falcon2Bionano_5584:HG2_PB_SVrefine2Falcon1plusDovetail_1448:HG3_PB_SVrefine2Falcon1Dovetail_6995:HG4_PB_SVrefine2Falcon1Dovetail_7040:HG4_Ill_MetaSV_676:HG4_Ill_GATKHCSBGrefine_8055:HG4_PB_SVrefine2PBcRDovetail_5828:HG4_PB_HySA_16882;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7839:HG3_Ill_GATKHCSBGrefine_7739:HG3_Ill_MetaSV_640;NumExactMatchSVs=3;ClusterMaxShiftDist=0.186275;ClusterMaxSizeDiff=0.183007;ClusterMaxEditDist=0.28524;PBcalls=14;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=10605;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=10:108991269-108991284;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=690.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:./.:12:9:12:19:0|1:23:0:0:11:0/1:24:9:0/1:12:22:.:.:.
chr10	109124155	HG2_PB_SVrefine2PB10Xhap12_8368	G	GTTGCCCGGACAATGGCAAACTGACATGGTGCACTGCTGGGTGCACCATGTCAGT	20	PASS	ClusterIDs=HG2_PB_pbsv_11577:HG2_PB_PB10Xdip_2920:HG3_PB_pbsv_11289:HG4_PB_pbsv_11587:HG4_Ill_svaba_14518:HG2_PB_assemblyticsfalcon_3285:HG3_PB_assemblyticsfalcon_3239:HG4_Ill_manta_2778:HG3_Ill_svaba_14623:HG2_PB_SVrefine2Falcon2Bionano_5585:HG2_Ill_svaba_14454:HG4_PB_SVrefine2Falcon1Dovetail_7041:HG2_PB_SVrefine2Falcon1plusDovetail_1449:HG2_Ill_breakscan11_4217:HG4_Ill_scalpel_10697:HG4_Ill_Krunchall_16161:HG4_Ill_GATKHC_18675:HG4_Ill_GATKHCSBGrefine_8056:HG4_Ill_FB_10074:HG4_Ill_250bpfermikitraw_15409:HG4_Ill_150bpfermikitraw_14787:HG3_PB_SVrefine2PBcRDovetail_5423:HG3_PB_SVrefine2Falcon1Dovetail_6996:HG3_Ill_scalpel_11170:HG3_Ill_manta_2667:HG3_Ill_Spiral_12140:HG3_Ill_SVrefine2DISCOVARDovetail_8551:HG3_Ill_Krunchall_15563:HG3_Ill_GATKHC_18554:HG3_Ill_GATKHCSBGrefine_7740:HG3_Ill_FB_10064:HG3_Ill_250bpfermikitraw_15094:HG3_Ill_150bpfermikitraw_14640:HG2_PB_SVrefine2PBcRplusDovetail_1385:HG2_PB_SVrefine2PB10Xhap12_8368:HG2_Ill_scalpel_11001:HG2_Ill_manta_3274:HG2_Ill_SVrefine2DISCOVARplusDovetail_1683:HG2_Ill_Krunchall_15885:HG2_Ill_GATKHC_18649:HG2_Ill_GATKHCSBGrefine_7840:HG2_Ill_FB_10088:HG2_Ill_250bpfermikitraw_15523:HG2_Ill_150bpfermikitraw_14621:HG2_10X_SVrefine210Xhap12_8134:HG2_PB_HySA_21003;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8134:HG2_Ill_150bpfermikitraw_14621:HG2_Ill_250bpfermikitraw_15523:HG2_Ill_FB_10088:HG2_Ill_GATKHCSBGrefine_7840:HG2_Ill_GATKHC_18649:HG2_Ill_Krunchall_15885:HG2_Ill_SVrefine2DISCOVARplusDovetail_1683:HG2_Ill_manta_3274:HG2_Ill_scalpel_11001:HG2_PB_SVrefine2PB10Xhap12_8368:HG2_PB_SVrefine2PBcRplusDovetail_1385:HG3_Ill_150bpfermikitraw_14640:HG3_Ill_250bpfermikitraw_15094:HG3_Ill_FB_10064:HG3_Ill_GATKHCSBGrefine_7740:HG3_Ill_GATKHC_18554:HG3_Ill_Krunchall_15563:HG3_Ill_SVrefine2DISCOVARDovetail_8551:HG3_Ill_Spiral_12140:HG3_Ill_manta_2667:HG3_Ill_scalpel_11170:HG3_PB_SVrefine2Falcon1Dovetail_6996:HG3_PB_SVrefine2PBcRDovetail_5423:HG4_Ill_150bpfermikitraw_14787:HG4_Ill_250bpfermikitraw_15409:HG4_Ill_FB_10074:HG4_Ill_GATKHCSBGrefine_8056:HG4_Ill_GATKHC_18675:HG4_Ill_Krunchall_16161:HG4_Ill_scalpel_10697;NumExactMatchSVs=31;ClusterMaxShiftDist=0.238532;ClusterMaxSizeDiff=0.238532;ClusterMaxEditDist=0.330275;PBcalls=14;Illcalls=31;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=15;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=54;DistBack=27604;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=10:109124156-109124160;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=691.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:30:0:38:1/1:0:17:0:27:1/1:0:70:./.:.:.:.:.:.
chr10	109847087	HG2_PB_SVrefine2PB10Xhap12_8369	A	ATATATATATATATTTATATATATTATATATATTTATATATCATATATATATATTATATATAATATTTATATATCATATATTTATATATATTATATATAATAAATATATAACATATATTCATATATATTATATATAATATTTATATATCATATATTTATATATATTATATATAATATTTATATATCATATATTTATATATATTATATATAATATTTATATATCATATATTTATATATATTATATATAATATTTATATATCATATATTTATATATTATATATAATATTTATATATCATATATTTATATATTATATATAATATTTATATATCATATATTTCTATATATTACATATAATATTTATATATCATATATTTATATATTATATATAATATTATATATCATATATTTATATATTATATATAATATTTATATATCATATATTTATATATTATATATAATATTTATATATCATATATTTATATATTATATATATTTGTATATTATATATATTTTTATATATTATATATAATATTGATATATAATATATAATATTTATATATTATATATTATATATTTATATAATATATTAATATTTATATATTATATATAATATATTTATATATATTATATATAATATTTATATATTATATATATATATTTATATATATTATATATAATATTTATATATATATATTTATATATATTATATATATTTATATATCATATATTTATATATATTATATATATTTATATATCATATATTTATATATATTATATATATTTATATATCATATATTTATATATATTATATATATTTATATATCATATATTTATATATAGTATATATATTTATATATCATATATTTATATATAGTATATATATTTATATATATATTTATATATATATATATTTATATATATATTTATATATATATATATATATATATATATTTATATATAGTATATATATTTATATATCATATATTTATATATAGTATATATATTTATATATCATATATTTATATATAGTATATATATTTATATATCATATATTTATATATAGTATATATATTTATATATCATATATTTATATATAGTATATATATTTATATATCATATATTTATATATAGTATATATATTTATATATCATATATTTATATATAGTATATATATTTATATATATATATTTATATATATTATATATTTATTTATATATAGTATATATATTTATATATCATATATTTATATATAGTATATATATTTATATATTATATATTTATATATAGTATATATATTTATATATTATATATTTATATATAGTATATATATTTATATATTATATATTTATATATAGTATATATATTTATATATTATATATTTATATATAGTATATATATTTATATATTATATATTTATATATATATATATATTTATATATTATATATTTATATATAGTATATATATTTATATATTATATATTTATATATATATATATATATTATATATTATATATTTATATATAGTATATATATTTATATATTATATATTTATATATATATATATATATATTATATATTTATATATTATATATATTTATATATTATATATTTATATATAGTATATATATTTATATATTATATATTTATATATATATATATATTTATATATTATATATTTATATATAGTATATATATTTATATATATATATTTATATATAGTATATATATTTATATATTATATATTTATATATATATATATATTTATATATTATATATT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6997:HG2_PB_pbsv_11579:HG3_PB_pbsv_11292:HG2_Ill_breakscan11_4218:HG2_PB_PB10Xdip_2921:HG3_PB_HySA_17497:HG3_PB_pbsv_11291:HG4_PB_SVrefine2Falcon1Dovetail_7042:HG2_PB_SVrefine2Falcon1plusDovetail_1451:HG3_PB_SVrefine2PBcRDovetail_5425:HG2_PB_SVrefine2PB10Xhap12_8369:HG2_PB_SVrefine2PBcRplusDovetail_1386:HG2_PB_SVrefine2Falcon2Bionano_5586;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8369;NumExactMatchSVs=1;ClusterMaxShiftDist=0.119231;ClusterMaxSizeDiff=0.118681;ClusterMaxEditDist=0.219231;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=1777;DistBack=36700;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=611;REFWIDENED=10:109847088-109847698;PctSeqSimilarity=0.97;PctSizeSimilarity=0.9574;PctRecOverlap=0.7738;SizeDiff=-79;StartDistance=-380;EndDistance=-380;GTMatch=0;TruScore=90;MatchId=692.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:45:1/1:1:22:2:13:./.:0:0:0:0:./.:0:1:./.:9:80:.:1842:.
chr10	110489824	HG2_PB_SVrefine2PB10Xhap12_8370	G	GAGGGAGGGAGGTAGAGGGAAGGAGGGAAGGAGATAGAGGGAAGGAGGGAAGGAAGGAGGGAGGTAGAGGGAAGGATGGAGGGAGATAGAGGGAAGGAGGGAGGGAGGTAGAGGGAAGGAGGGAGGGAAGTAAGTAGAGGGAGGGAGGTAGGTAGGTGGAGGGAGGTAGGTAGAGGGAAGAAGGGAGGTAGAGGGAGGGAGGGAGTTGGAGGGAGGTGGAGGGAGAGGGAGGGAGGTGGAGGGAGAGGGAGGGAGGTGGAGGGAGAGGGAGGGAGGTGGAGGGAGAGGGAGGGAGAGGGAGGGAGGTGGAGGCATAGGGAAGGAAGTGGAGGGAGAGGGAGGGAGGGAAGTGGAGGGAGGGAAGGGGAGGGAGGGAGGGAAATGGAGGGAGGGAGGGAAATGGAGGGAGGGAGGGAAGGAGGGAGGGAGGTCAAGGGAAGGAGGGTGGGAGGGAGGTCGAGGGAAGGAGGGTGGGAGGGAGGTCAAGAGAAGGAGGGAGGGAGCGAGGGAAGTCGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAGGTCGAGGGAAAGGGGGAGGTAGGTGGAGGGAGGGAGGTGGAGGGAGGGAGGGAGGTAGGTGGAGGGAGGGAGGCAGGTAGGTGGAGGGAGGGAAGGAGGTATGTGGAGGGAGGGAGGGGGGCAGATAGGTAGAGGGAGGGAGGCAGGTAGGTGGAGGGAGGGAGGGATGCAGGTAGGTGGAGGGAGGGAGGCGGGTAGGGGGAGGGAGGGAGGCAGGTAGGTGGAGGGTGGGAGGGAGGCAGGTAGGTGGAGGGTGGGAGGGAGGCAGGTAGGTAGGTGGAGGGAGGGAGGGAGGTAGGTAGGTGTAGGGAGGGAGGGAGGTAGGTGGAAGGAGGGAGGTAGGTAGGTGGAGGGAGGGAGGGAGGCAGGTAGGTGGGAGGGAGGGAGGTGGAAGGAGGGAGGGAAGTGAAGGGAGGGAGGTAGGGGGAGGGAGGGAGAGAGGGAGGTGGAGGGAGAGAGGGAGGTGGAGGGAGGGAGGGGGAGGGGAGGGGGGAGGGATGAGGTGGGGGAGGGAGGTGGGGGGAGGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1452:HG2_Ill_breakscan11_4219:HG2_PB_pbsv_11580:HG2_PB_HySA_21016:HG3_PB_pbsv_11294:HG3_PB_HySA_17502:HG2_PB_PB10Xdip_2922:HG4_PB_SVrefine2Falcon1Dovetail_7045:HG2_PB_SVrefine2PBcRplusDovetail_1387:HG2_PB_SVrefine2Falcon2Bionano_5587:HG2_PB_SVrefine2PB10Xhap12_8370:HG3_PB_SVrefine2Falcon1Dovetail_7000:HG3_PB_SVrefine2PBcRDovetail_5426;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8370;NumExactMatchSVs=1;ClusterMaxShiftDist=0.15286;ClusterMaxSizeDiff=0.149901;ClusterMaxEditDist=0.296029;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=1071;DistBack=56;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=290;REFWIDENED=10:110489825-110490114;PctSeqSimilarity=0.9733;PctSizeSimilarity=0.9991;PctRecOverlap=0.7937;SizeDiff=1;StartDistance=-221;EndDistance=-221;GTMatch=0;TruScore=92;MatchId=693.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:1:16:0:28:./.:21:27:21:50:./.:0:0:0/1:16:59:.:975:.
chr10	112171496	HG4_Ill_SVrefine2DISCOVARDovetail_8353	T	TAGCCCTGGTGTCTCCAAAGAACTAGAGAAAAGCAGCAGCCTTGGACCTTGGAGAATCTTCCAACATCACTTCCC	20	PASS	ClusterIDs=HG2_PB_HySA_21024:HG3_PB_HySA_17513:HG3_PB_pbsv_11301:HG4_PB_SVrefine2PBcRDovetail_5831:HG4_PB_SVrefine2Falcon1Dovetail_7047:HG4_Ill_SVrefine2DISCOVARDovetail_8353:HG4_Ill_250bpfermikitraw_15435:HG2_PB_SVrefine2PBcRplusDovetail_1391:HG2_PB_SVrefine2PB10Xhap12_8374:HG2_PB_SVrefine2Falcon2Bionano_5589:HG2_PB_SVrefine2Falcon1plusDovetail_1455:HG2_Ill_SVrefine2DISCOVARplusDovetail_1691:HG2_Ill_250bpfermikitraw_15544:HG2_PB_PB10Xdip_2944:HG4_PB_HySA_16898;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15544:HG2_Ill_SVrefine2DISCOVARplusDovetail_1691:HG2_PB_SVrefine2Falcon1plusDovetail_1455:HG2_PB_SVrefine2Falcon2Bionano_5589:HG2_PB_SVrefine2PB10Xhap12_8374:HG2_PB_SVrefine2PBcRplusDovetail_1391:HG4_Ill_250bpfermikitraw_15435:HG4_Ill_SVrefine2DISCOVARDovetail_8353:HG4_PB_SVrefine2Falcon1Dovetail_7047:HG4_PB_SVrefine2PBcRDovetail_5831;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0784314;ClusterMaxSizeDiff=0.0653595;ClusterMaxEditDist=0.179487;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=-74;DistForward=-1;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=156;REFWIDENED=10:112171497-112171652;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=694.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:1:32:0:10:./.:8:6:9:6:0/1:19:32:./.:.:.:.:.:.
chr10	113015642	HG2_Ill_250bpfermikitraw_15548	A	AGGTGGTTACCCATGTTGTCTGAAAGGGCTACAATCCTGTCTCCCCCCCGCTC	20	PASS	ClusterIDs=HG4_PB_pbsv_11596:HG3_PB_pbsv_11303:HG2_PB_PB10Xdip_2946:HG2_PB_assemblyticsfalcon_3313:HG4_Ill_svaba_14543:HG4_Ill_manta_2779:HG4_Ill_Krunchall_16192:HG4_Ill_GATKHC_18715:HG4_Ill_GATKHCSBGrefine_8067:HG4_Ill_Cortex_451:HG4_Ill_250bpfermikitraw_15439:HG4_Ill_150bpfermikitraw_14821:HG3_Ill_svaba_14651:HG3_Ill_manta_2673:HG3_Ill_Spiral_12170:HG3_Ill_Krunchall_15594:HG3_Ill_GATKHC_18596:HG3_Ill_GATKHCSBGrefine_7752:HG3_Ill_Cortex_467:HG3_Ill_250bpfermikitraw_15126:HG3_Ill_150bpfermikitraw_14678:HG2_Ill_svaba_14475:HG2_Ill_manta_3279:HG2_Ill_SpiralSDKrefine_2130:HG2_Ill_Krunchall_15913:HG2_Ill_GATKHC_18681:HG2_Ill_GATKHCSBGrefine_7851:HG2_Ill_Cortex_1060:HG2_Ill_250bpfermikitraw_15548:HG2_Ill_150bpfermikitraw_14648:HG2_PB_HySA_21034:HG4_PB_HySA_16908;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14648:HG2_Ill_250bpfermikitraw_15548:HG2_Ill_Cortex_1060:HG2_Ill_GATKHCSBGrefine_7851:HG2_Ill_GATKHC_18681:HG2_Ill_Krunchall_15913:HG2_Ill_SpiralSDKrefine_2130:HG2_Ill_manta_3279:HG2_Ill_svaba_14475:HG3_Ill_150bpfermikitraw_14678:HG3_Ill_250bpfermikitraw_15126:HG3_Ill_Cortex_467:HG3_Ill_GATKHCSBGrefine_7752:HG3_Ill_GATKHC_18596:HG3_Ill_Krunchall_15594:HG3_Ill_Spiral_12170:HG3_Ill_manta_2673:HG3_Ill_svaba_14651:HG4_Ill_150bpfermikitraw_14821:HG4_Ill_250bpfermikitraw_15439:HG4_Ill_Cortex_451:HG4_Ill_GATKHCSBGrefine_8067:HG4_Ill_GATKHC_18715:HG4_Ill_Krunchall_16192:HG4_Ill_manta_2779:HG4_Ill_svaba_14543;NumExactMatchSVs=26;ClusterMaxShiftDist=0.12963;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.240741;PBcalls=6;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:113015643-113015644;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:4:28:1:9:1/1:0:17:0:21:1/1:0:48:./.:.:.:.:.:.
chr10	113097436	HG4_Ill_250bpfermikitraw_15440	C	CTGCTCACTTGCATGCTCCTTGGTCCCATTGAATGGAAGAAACAGCATTTCCAACTCTGGGGGTAGCCAATGCTGAGATAGGACTTTCTGGCTCCCGCAGCTGCTGTGTTTTAGAGGAAATAAATCAGGTTTGGGTACA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8145:HG4_PB_pbsv_11597:HG2_PB_HySA_21035:HG2_PB_pbsv_11589:HG4_PB_HySA_16909:HG4_PB_SVrefine2PBcRDovetail_5832:HG4_Ill_SVrefine2DISCOVARDovetail_8354:HG4_Ill_250bpfermikitraw_15440:HG2_PB_SVrefine2Falcon2Bionano_5591;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5591:HG4_Ill_250bpfermikitraw_15440:HG4_Ill_SVrefine2DISCOVARDovetail_8354:HG4_PB_SVrefine2PBcRDovetail_5832;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0694444;ClusterMaxSizeDiff=0.0694444;ClusterMaxEditDist=0.267606;PBcalls=6;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=138;DistBack=7096;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=143;REFWIDENED=10:113097437-113097579;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:31:./.:25:5:10:18:./.:2:26:3:0:0/1:21:14:./.:.:.:.:.:.
chr10	115048250	HG4_Ill_MetaSV_681	T	TAAAAATAATCATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4221:HG2_PB_pbsv_11595:HG4_PB_pbsv_11604:HG2_PB_assemblyticsfalcon_3329:HG4_PB_HySA_16922:HG2_PB_HySA_21045:HG4_PB_SVrefine2Falcon1Dovetail_7054:HG4_PB_SVrefine2PBcRDovetail_5838:HG4_Ill_MetaSV_681:HG2_PB_SVrefine2Falcon1plusDovetail_1460:HG3_PB_SVrefine2Falcon1Dovetail_7007;NumClusterSVs=11;ExactMatchIDs=HG4_Ill_MetaSV_681:HG4_PB_SVrefine2PBcRDovetail_5838;NumExactMatchSVs=2;ClusterMaxShiftDist=0.150943;ClusterMaxSizeDiff=0.150943;ClusterMaxEditDist=0.18038;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=316;DistBack=25226;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:115048251-115048265;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=698.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:23:0|1:25:3:1:13:1|0:0:11:20:0:0/1:25:16:0/1:8:30:.:.:.
chr10	115250282	HG2_PB_SVrefine2PB10Xhap12_8381	AGG	GGAGGGGCGCGTGGCTCACGCCTGTAATCCAGCACTTTGGAGGCGAGCGGGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCGTCTCTACTAAAAATACAAAAATTAGCGGGCGGTGGCGGGCCTGTAGTCCCAGCTACTCGGAGGCTGAGCAGGAGAATGGCGTGAACCGGGAGCGGAGCTTGCAGTGAGCGAGATTGCGCCACTGCAGTCGCAGTCGCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7008:HG2_PB_pbsv_11596:HG2_PB_SVrefine2PB10Xhap12_8381:HG2_PB_PB10Xdip_2951:HG2_PB_assemblyticsfalcon_3331:HG2_PB_SVrefine2Falcon1plusDovetail_1461:HG3_PB_HySA_17539:HG2_PB_SVrefine2Falcon2Bionano_5595:HG2_PB_SVrefine2PBcRplusDovetail_1397:HG2_Ill_breakscan11_4222:HG2_PB_HySA_21048:HG3_PB_pbsv_11310;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8381;NumExactMatchSVs=1;ClusterMaxShiftDist=0.189147;ClusterMaxSizeDiff=0.189147;ClusterMaxEditDist=0.266667;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=298;DistBack=9;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:115250285-115250281;PctSeqSimilarity=0.9444;PctSizeSimilarity=0.8896;PctRecOverlap=0.8985;SizeDiff=-37;StartDistance=13;EndDistance=15;GTMatch=0;TruScore=91;MatchId=699.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:39:./.:25:10:4:24:./.:25:0:1:5:./.:36:4:0/1:9:21:.:.:.
chr10	115843587	HG2_PB_SVrefine2PB10Xhap12_8383	C	CTATATATATATAAATATATATAAATTATAAATATATAATTACAAATATATATAATATTAATAATATAATATAATATTATATATAAATATATAATATAATATTATATATAATATATAATATAATATTATATATAATATATAATATAATATTATATATAACTATATAATATAATATTATATATAACTATATAATATAATATATATAAATATATAATATAATATTATATATAACTATATAATATAATATTATATATAATATATAATATATATTATATATAATATATAATATAATATTATATATAATATATAATATATTATATTATATATAAATATATAATATATTATATTATATAAATATATAATATATTATATTATATAAATATATAATATATTATATAAATATATAATATATTTTATAAATATATAATATATAGTTATATTATATTATATATTATAATATAATATATATATATATTATATATATATATTAATTATATATAAATAATATATTAAGATTATATATTATAACATAATATATTAAGATTATATATTATAATATATATATATTATATATTAATATAATATATTATATTATATATTACAATATAATATAATATATTATATTATATATTACAATATAATATAATATATTATATTATATATTACAATATAATATAATATATTATATTATATATTAAATATAATATATTATATTATATATTACAATATAATATAATATATTATATTATATATTATAATATATATTATATATTATAATATATAATATATAAATTATATATATAGTTATATTATATTATATATTATAATATAATACATAAATATATAATATATATAGTTATATATCATATTATATATTATGTATCATATAATATACATTATATATTTATATAGTTATAAATATATAATATATTAATATATTATAAATATATTATATATTATATATTTATAACTATATTAATATATTATATATTTATAACTATATTATATATTAAATATTTATAACTATATTATATATTAATGCATTTATAATATATTATATATTAATGCATTTATAAATATTTATATATTAATAAATATATAATATGTATTATATAATATATTATCTATTATAATATATTATATATTATATATTATTATATATTATATTATATATTAATATTATTATATTATTATATATTATATATTATTATATATTGTATAATATATTATATATTATTATATTATTATATATTATATATTATATATTGTATAATATATTATATATTATTATATTATTATATATATTATATATTATTATATATTTATAATATATTACTATATATTATATATTATTATATAATATATAATATATTACTATATATTATATATTATTATATAATATATAATATATTACTATATATTATATATTATTATATAATATATAATATATTACTATATATTATATATTATTATATAATATATAATATATTACTATATATTATATATTATTATATAATATATAATATATTACTATATTATATATTATTATATAATATATAATATATTACTATATATTATATATTATTATATAATATATAATATATTACTATATATTATATATTATTATATAATATATAATATATTACTATATATTATATATTATTATATAATATATAATATATTACTATATATTATATATTATTATATAATATATAATATATTACTATATTATATATTATTATATAATATATAATATATTACTATATAATATATTATTATATAATATATAATATATTACTATATATATATTATTATATATATATAATATATTACTATATATATATTATTATATATATATAATATATTACTATATAATATATTATTATATATATATAATATATTACTATATAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5597:HG4_PB_pbsv_11606:HG3_PB_HySA_17547:HG2_PB_HySA_21056:HG3_PB_SVrefine2PBcRDovetail_5436:HG3_PB_pbsv_11313:HG2_PB_SVrefine2PBcRplusDovetail_1399:HG2_PB_pbsv_11598:HG4_PB_SVrefine2PBcRDovetail_5840:HG2_PB_SVrefine2Falcon1plusDovetail_1463:HG2_PB_SVrefine2PB10Xhap12_8383:HG3_PB_SVrefine2Falcon1Dovetail_7010:HG4_PB_SVrefine2Falcon1Dovetail_7056;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8383;NumExactMatchSVs=1;ClusterMaxShiftDist=0.178447;ClusterMaxSizeDiff=0.177909;ClusterMaxEditDist=0.281645;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1910;DistBack=46689;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=208;REFWIDENED=10:115843588-115843795;PctSeqSimilarity=0.9754;PctSizeSimilarity=0.9637;PctRecOverlap=0.8855;SizeDiff=-72;StartDistance=-191;EndDistance=-191;GTMatch=1;TruScore=94;MatchId=701.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:1:35:1:19:./.:1:0:1:1:0/1:14:18:./.:14:139:.:1937:.
chr10	116012942	HG2_PB_SVrefine2PBcRplusDovetail_1400	T	TTCCCCTCCCCTCTCTCCTCTCCCCTCCCCCTCCCCATCCTCTCCCCCTCCCCCTCCCCTCCCCCTCCCCTCCCCTCCCCTCCCCCCCCTCCCCTCCCCTCCTCCTCCCCCTCCCCTCTCCTCCTCTCCCCTCTCCTCCTCTCCCCTCCTCTCCCCTCCCCTCCCCCTCTCCCCCTCCTCTCCCCTCCCCCTCTCCCCTCCCCCTCTCCCCTCCCCCTCTCCCCTCCCCCTGTCCCCCTCCTCTCCCCCTCTCCCCTCCCCCTCTCCTCTCCCCCTCCTCTCCCCCTCTCCCCCTCCCCCTCTCCCCCTCCCCCTCTCCCCCTCCCCCTCTCCCCTCCCCCTCTCCCCCTCCCCCCCTCCCCTCCCCTCCCCCTCCCCTCCCCCTCTCCCCTCCCCCTCCCCTCCCCCTCTCCCCCTCCCCCTCCCCTCCCCCTCTCCCCCTCCCCCTCCCCTCCCCCTCTCCCCCTCCCCCTCCCCTTTCCCCCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7057:HG2_PB_HySA_21058:HG2_PB_pbsv_11599:HG2_PB_SVrefine2Falcon1plusDovetail_1464:HG3_PB_SVrefine2Falcon1Dovetail_7011:HG3_PB_SVrefine2PBcRDovetail_5437:HG2_PB_SVrefine2Falcon2Bionano_5598:HG2_PB_SVrefine2PB10Xhap12_8384:HG2_PB_SVrefine2PBcRplusDovetail_1400:HG3_PB_pbsv_11314;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_1400;NumExactMatchSVs=1;ClusterMaxShiftDist=0.161088;ClusterMaxSizeDiff=0.158996;ClusterMaxEditDist=0.224696;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=485;DistBack=56349;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=119;REFWIDENED=10:116012943-116013061;PctSeqSimilarity=0.9614;PctSizeSimilarity=0.9838;PctRecOverlap=0.9615;SizeDiff=-8;StartDistance=-15;EndDistance=-15;GTMatch=1;TruScore=96;MatchId=702.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:50:1/1:1:13:2:8:./.:0:1:0:0:./.:0:6:0/1:2:14:.:.:.
chr10	117006327	HG2_Ill_GATKHCSBGrefine_7857	A	AATCTCTCTCATTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTAGCGCAATCTCGGCTCACTGCAAGCTCCACTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_Ill_manta_2781:HG2_PB_pbsv_11603:HG3_PB_pbsv_11317:HG2_PB_assemblyticsfalcon_3347:HG2_Ill_breakscan11_4223:HG4_PB_pbsv_11611:HG4_PB_SVrefine2Falcon1Dovetail_7059:HG4_PB_SVrefine2PBcRDovetail_5842:HG4_Ill_MetaSV_682:HG4_Ill_GATKHCSBGrefine_8080:HG3_PB_SVrefine2PBcRDovetail_5438:HG3_Ill_MetaSV_645:HG3_Ill_GATKHCSBGrefine_7757:HG2_PB_SVrefine2PB10Xhap12_8386:HG2_PB_SVrefine2Falcon2Bionano_5599:HG2_Ill_manta_3282:HG2_Ill_MetaSV_664:HG2_Ill_GATKHCSBGrefine_7857:HG3_PB_SVrefine2Falcon1Dovetail_7013:HG2_PB_SVrefine2PBcRplusDovetail_1401:HG2_PB_SVrefine2Falcon1plusDovetail_1467:HG2_PB_PB10Xdip_2961;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7857:HG2_Ill_MetaSV_664:HG2_Ill_manta_3282:HG2_PB_SVrefine2Falcon2Bionano_5599:HG2_PB_SVrefine2PB10Xhap12_8386:HG3_Ill_GATKHCSBGrefine_7757:HG3_Ill_MetaSV_645:HG3_PB_SVrefine2PBcRDovetail_5438:HG4_Ill_GATKHCSBGrefine_8080:HG4_Ill_MetaSV_682:HG4_PB_SVrefine2PBcRDovetail_5842;NumExactMatchSVs=11;ClusterMaxShiftDist=0.131661;ClusterMaxSizeDiff=0.131661;ClusterMaxEditDist=0.244514;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=319;DistBack=178791;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:117006328-117006342;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:0:12:1:16:1/1:0:8:0:8:1/1:0:30:1/1:1:71:.:.:.
chr10	118150205	HG2_PB_SVrefine2PBcRplusDovetail_1406	G	GAGGAAGAAGAAGGAGGAAGAGGAGAAGGAGGAGGAGGAGGAAGTGGAGGAGAAGGAGGAGGAAGAAGGAAGAAGGGGAAAGAAGAAGGAGGAGGATAGAGGAGGAGGAAGAAGAAAGAGGAGGGAGGAGGACAAAGGAGGAGAGAAGAAACAAGGAGGAGGAGAAAGGAGAAGAGAGGAGGAGGAAGGAGGAGGAGGAAGGAGAAAGGAGGAGGAGGAAGGAGAAAGGAGGAGGAAGGAGAAAGGAGGAGGAGGAAGGAGAAAGGAGGAGGAGGAGAAAGGAGGAACAAGAAGAAGGAGAAGGAGGAGCAGAAGGAGAAGGAAGAAGAGAAGGTGGAGGAGAAGGAGAAGAGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7016:HG2_PB_pbsv_11606:HG4_PB_HySA_16950:HG4_PB_pbsv_11616:HG4_Ill_MetaSV_684:HG2_PB_HySA_21085:HG4_Ill_GATKHCSBGrefine_8083:HG3_Ill_MetaSV_647:HG3_Ill_GATKHCSBGrefine_7760:HG2_Ill_MetaSV_666:HG2_Ill_GATKHCSBGrefine_7860:HG2_PB_PB10Xdip_2963:HG2_Ill_breakscan11_4224:HG4_PB_HySA_16949:HG4_PB_SVrefine2Falcon1Dovetail_7063:HG2_10X_SVrefine210Xhap12_8161:HG4_PB_SVrefine2PBcRDovetail_5846:HG4_Ill_SVrefine2DISCOVARDovetail_8374:HG3_PB_SVrefine2PBcRDovetail_5440:HG3_Ill_SVrefine2DISCOVARDovetail_8578:HG2_PB_SVrefine2PBcRplusDovetail_1406:HG2_PB_SVrefine2PB10Xhap12_8392:HG2_PB_SVrefine2Falcon2Bionano_5601:HG2_Ill_SVrefine2DISCOVARplusDovetail_1709:HG2_PB_SVrefine2Falcon1plusDovetail_1470;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1709:HG2_PB_SVrefine2Falcon2Bionano_5601:HG2_PB_SVrefine2PB10Xhap12_8392:HG2_PB_SVrefine2PBcRplusDovetail_1406:HG3_Ill_SVrefine2DISCOVARDovetail_8578:HG3_PB_SVrefine2PBcRDovetail_5440:HG4_Ill_SVrefine2DISCOVARDovetail_8374:HG4_PB_SVrefine2PBcRDovetail_5846;NumExactMatchSVs=8;ClusterMaxShiftDist=0.255977;ClusterMaxSizeDiff=0.255977;ClusterMaxEditDist=0.329114;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=353;DistBack=16;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=156;REFWIDENED=10:118150206-118150361;PctSeqSimilarity=0.978;PctSizeSimilarity=0.986;PctRecOverlap=0.7827;SizeDiff=-5;StartDistance=-75;EndDistance=-75;GTMatch=0;TruScore=91;MatchId=704.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:0:12:0:11:1/1:0:15:1:33:1/1:0:12:1/1:2:59:.:.:.
chr10	120769117	HG2_PB_assemblyticsfalcon_3381	AAGAGCAAGACCC	TTGGGCGGGCGCGGTGGCTTACGCCTGTAATCCAGCACTTTGGGAGGCCGAGACAGGCGGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACACGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGAGCGTTGGCGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTAAGATCGTGCCACTGCACTCCAGCCTGGGCGATAGAGCGAGACTCCGTCCCAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1416:HG2_PB_SVrefine2PB10Xhap12_8405:HG3_PB_pbsv_11332:HG3_PB_SVrefine2Falcon1Dovetail_7027:HG3_PB_HySA_17595:HG2_PB_pbsv_11618:HG2_PB_SVrefine2Falcon2Bionano_5610:HG2_PB_assemblyticsfalcon_3381:HG2_PB_assemblyticsPBcR_3293:HG2_PB_HySA_21117:HG2_PB_SVrefine2Falcon1plusDovetail_1479:HG4_PB_SVrefine2Falcon1Dovetail_7073:HG3_PB_SVrefine2PBcRDovetail_5450;NumClusterSVs=13;ExactMatchIDs=HG2_PB_assemblyticsfalcon_3381;NumExactMatchSVs=1;ClusterMaxShiftDist=0.15047;ClusterMaxSizeDiff=0.15047;ClusterMaxEditDist=0.282132;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=291;DistBack=42391;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:120769130-120769116;PctSeqSimilarity=0.9516;PctSizeSimilarity=0.9037;PctRecOverlap=0.9381;SizeDiff=-31;StartDistance=1;EndDistance=13;GTMatch=0;TruScore=93;MatchId=707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:28:./.:13:9:6:15:./.:4:1:19:0:0/1:28:14:0/1:14:20:.:.:.
chr10	121306836	HG2_PB_SVrefine2PB10Xhap12_8409	AAATAAATA	GCTCCGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCATGGTAACCTCTGCCTCCCAGGTTCAAGCGGTTCTCCTACCTTAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTGCCACCACATCCGGCTAATTTTCGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCGAGGCTGGTCTCAAAATCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTAAGCCAATGTGCCCAGCCGTCATTCATTTATTTTTGTAGAGCTGGGGTCTTGTTATGCTGCCCAGGATGGTCACAAACTCCTGACCTCCTACCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGGGAGCTACAGCATCTGGTCCCTACCCACCTCCCCTCCCCGCCCCCACTTTTTTTAAGAGTCAGGGTCTCACCGGGCATGGTTTCTCACGCCCGTAATCCCAGCACTTTGGGAGGCTGAGGGGGGCAGATCACGAGGTCAGGAGATCAACATCATCCTGGCCAACATAGTGAAACTCCGTTTCTACTAAAAATACAAAAATCAGCTGGGCGTGGTGGCACATGCCTGTAGTCCCTGGTCTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCAGGGAGTCGGAGATTGCAGTGAGCCGAGATCACGCCACTGCACTCCAACCTGGTGACAGAGTGAGACTCTGTCTCAGAAAACAAAAACAAGAAGAGCCAAGGTCTCCATCTGTCATCCGGGCTAGAGTGCAGTGGTACAATCATAGCTCACTGCTACCCACTCCTGGGTAAGCCTTCATTTTTACATTAGTTTTGCTTTCTTAAAACTCTTAATTTCCCATTGAAGGAGCAAGCAGACACTGGCTGCGTTTCCCATCTTTGATCTCTCTTGCACTTCAAGTCCCACATTCCTGGCATATCACAGCTGGAGGGATCCTTGGAGATCAGCATATTATGCTGCAGATCAGGAAACTGAGGCTCAGACAGCCGCTGAACTTGTGTTTAGCTATGATGTGATACTAGGTTTCCCGACTCCTGGGCAGGCAGTTTTCCTGGTACAGCACTCTTTATCTGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGAGACAGAGTCTCGTAATGTCACCCAGGCTGGAATGCAATGATGCAGTCACAGCTTACTGCAGCCTCCACCTCCCAGGCTCAAGCAATCCTCTCCTCCCACCTCAGCCCTCTTCAGTAGCTGGGACCACAGGTGTGCACTACCACGCCTAGCTAATTTTATTTATTTATTTATTTATTTATTGCAGAGATGGGGGTCTGTCTCCCTTTGTTGCCCAGGCTCAACTGGAATTTCTGGGTTCAAGTGATCCTCCCTCCTTAGCCTTCTAAGTAGCTGGGACTACAGGCACATGCCACTATGCATGGCTAATTTTTTTAAGTTTTTTATTATTATTATTTTTTTTTGAGACAGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCTGCAATGGTGCAATCTCGGCCCATCGCAACCTCTGCCTCCCGGGTTCAAGCGATTCCCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGCGGCACCACGCCTGGCTAATTTTGTATTTTTTAGTAAAGACAGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCGACCTCAGGTGATCCGTCCTCCTAGGCCTCCCAAAGGGTTGGGATTATAGGCTTGAGCCACCACGTCTAGCTGGCTAGGTTTTTTTAATACAATTTTTTTTAAAGTAAACTTTATTATATTATTATTTTATTTTTATTTTTTTGAGACCAAGTCTCACTCTGTCGCCAGGCTGGAATGCAGTGGCACAATCTTGGCTTACTGCAACCTCCATCTCCCAGGTTCAAGCAATTCCCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCGTGCCACCACACCTGGCTAAATTTTTGTATTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1482:HG4_PB_pbsv_11637:HG2_PB_pbsv_11630:HG4_PB_HySA_16992:HG3_PB_SVrefine2PBcRDovetail_5453:HG3_Ill_SVrefine2DISCOVARDovetail_8601:HG2_PB_assemblyticsPBcR_3305:HG2_PB_SVrefine2PBcRplusDovetail_1420:HG2_PB_SVrefine2PB10Xhap12_8409:HG2_PB_PB10Xdip_2980:HG2_Ill_SVrefine2DISCOVARplusDovetail_1720:HG2_PB_SVrefine2Falcon2Bionano_5614:HG3_PB_assemblyticsfalcon_3334:HG3_PB_SVrefine2Falcon1Dovetail_7030:HG4_PB_SVrefine2Falcon1Dovetail_7075:HG4_Ill_SVrefine2DISCOVARDovetail_8390:HG2_10X_SVrefine210Xhap12_8178:HG4_PB_SVrefine2PBcRDovetail_5857:HG2_PB_assemblyticsfalcon_3393;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1720:HG2_PB_PB10Xdip_2980:HG2_PB_SVrefine2PB10Xhap12_8409:HG2_PB_SVrefine2PBcRplusDovetail_1420:HG2_PB_assemblyticsPBcR_3305;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0391186;ClusterMaxSizeDiff=0.0381282;ClusterMaxEditDist=0.169798;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1981;DistBack=-9;DistForward=-1;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:121306845-121306835;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9985;PctRecOverlap=0.997;SizeDiff=-3;StartDistance=0;EndDistance=8;GTMatch=0;TruScore=99;MatchId=708.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:./.:0:11:0:4:./.:0:2:0:8:1/1:0:38:1/1:13:337:.:2078:.
chr10	122534886	HG2_PB_SVrefine2PBcRplusDovetail_1425	C	CTTTTTTTTTTTTGAGATAGAATCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACTGTCTCAGCTCAGTACAACCTCTGCCTCCTGGATTCAAGCAATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGACTACAGGCACACACCACCACGCCCAGCTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCAACATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCATGGTCCACTGGCCTCAACCTCCCAAAGTGCTGCGATTACAGGCATGAGCCACTGCTCCGGCCCCTGACACTTTTTTTTTTTTTTTTTTTTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1486:HG2_PB_PB10Xdip_2987:HG4_PB_HySA_17000:HG2_PB_HySA_21142:HG4_PB_SVrefine2Falcon1Dovetail_7081:HG3_PB_SVrefine2Falcon1Dovetail_7035:HG4_PB_pbsv_11645:HG2_PB_pbsv_11637:HG2_PB_SVrefine2PBcRplusDovetail_1425:HG2_PB_SVrefine2PB10Xhap12_8414:HG4_PB_SVrefine2PBcRDovetail_5862:HG4_Ill_SVrefine2DISCOVARDovetail_8393;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_1425;NumExactMatchSVs=1;ClusterMaxShiftDist=0.101852;ClusterMaxSizeDiff=0.0987654;ClusterMaxEditDist=0.253394;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=21930;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=305;REFWIDENED=10:122534887-122535191;PctSeqSimilarity=0.9585;PctSizeSimilarity=0.9908;PctRecOverlap=0.1046;SizeDiff=-3;StartDistance=-290;EndDistance=-290;GTMatch=0;TruScore=68;MatchId=709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:35:./.:17:16:6:9:./.:2:1:1:4:0/1:6:4:./.:2:10:.:.:.
chr10	124735996	HG2_PB_HySA_21167	A	AGGAGCAAAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGAGATCGAGACCATCCTGGCCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCAGGCGTGGTAGCGGGCGCCTGTAAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTACACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAG	20	PASS	ClusterIDs=HG2_PB_HySA_21166:HG4_PB_pbsv_11656:HG2_PB_HySA_21167:HG4_PB_HySA_17027:HG2_PB_SVrefine2Falcon2Bionano_5623:HG4_PB_SVrefine2Falcon1Dovetail_7088:HG3_PB_SVrefine2Falcon1Dovetail_7041:HG2_Ill_breakscan11_4227:HG3_PB_pbsv_11352:HG2_PB_pbsv_11643;NumClusterSVs=10;ExactMatchIDs=HG2_PB_HySA_21167;NumExactMatchSVs=1;ClusterMaxShiftDist=0.109375;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.184524;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=4;DistForward=46210;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:124735991-124736005;PctSeqSimilarity=0.9893;PctSizeSimilarity=0.9938;PctRecOverlap=0.9782;SizeDiff=2;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=98;MatchId=712.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:20:0|1:27:0:1:18:./.:2:7:32:0:0/1:27:7:0/1:7:21:.:.:.
chr10	126019507	HG3_Ill_manta_2692	A	ACCTTATTTGGAAATAAGGACTTTTCGGATGTCTGCAGTGAGCATGCAGACACAGATCCAGGAATTGATCATGCTCACTGCAGACATCCGAAAAGT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3023:HG3_PB_pbsv_11359:HG2_PB_assemblyticsfalcon_3448:HG2_PB_pbsv_11651:HG2_PB_assemblyticsPBcR_3357:HG4_PB_pbsv_11663:HG2_Ill_breakscan11_4229:HG4_PB_SVrefine2PBcRDovetail_5873:HG4_Ill_manta_2798:HG4_Ill_SVrefine2DISCOVARDovetail_8406:HG4_Ill_GATKHC_18846:HG4_Ill_GATKHCSBGrefine_8117:HG4_Ill_250bpfermikitraw_15550:HG4_Ill_150bpfermikitraw_14929:HG3_PB_SVrefine2Falcon1Dovetail_7046:HG3_Ill_manta_2692:HG3_Ill_SVrefine2DISCOVARDovetail_8614:HG3_Ill_Krunchall_15717:HG3_Ill_250bpfermikitraw_15243:HG2_PB_SVrefine2PBcRplusDovetail_1434:HG2_PB_SVrefine2PB10Xhap12_8425:HG2_PB_SVrefine2Falcon2Bionano_5628:HG2_PB_SVrefine2Falcon1plusDovetail_1494:HG2_Ill_manta_3294:HG2_Ill_SpiralSDKrefine_2212:HG2_Ill_SVrefine2DISCOVARplusDovetail_1734:HG2_Ill_Krunchall_16039:HG2_Ill_GATKHCSBGrefine_7895:HG2_Ill_250bpfermikitraw_15669:HG2_Ill_150bpfermikitraw_14763:HG2_10X_SVrefine210Xhap12_8195:HG3_PB_SVrefine2PBcRDovetail_5463:HG3_Ill_Spiral_12260:HG3_Ill_GATKHCSBGrefine_7791:HG2_PB_HySA_21198;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8195:HG2_Ill_150bpfermikitraw_14763:HG2_Ill_250bpfermikitraw_15669:HG2_Ill_GATKHCSBGrefine_7895:HG2_Ill_Krunchall_16039:HG2_Ill_SVrefine2DISCOVARplusDovetail_1734:HG2_Ill_SpiralSDKrefine_2212:HG2_Ill_manta_3294:HG2_PB_SVrefine2Falcon1plusDovetail_1494:HG2_PB_SVrefine2Falcon2Bionano_5628:HG2_PB_SVrefine2PB10Xhap12_8425:HG2_PB_SVrefine2PBcRplusDovetail_1434:HG3_Ill_250bpfermikitraw_15243:HG3_Ill_Krunchall_15717:HG3_Ill_SVrefine2DISCOVARDovetail_8614:HG3_Ill_manta_2692:HG3_PB_SVrefine2Falcon1Dovetail_7046:HG4_Ill_150bpfermikitraw_14929:HG4_Ill_250bpfermikitraw_15550:HG4_Ill_GATKHCSBGrefine_8117:HG4_Ill_GATKHC_18846:HG4_Ill_SVrefine2DISCOVARDovetail_8406:HG4_Ill_manta_2798:HG4_PB_SVrefine2PBcRDovetail_5873;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.0618557;ClusterMaxEditDist=0.240838;PBcalls=14;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=95;DistBack=16732;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=10:126019508-126019515;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=715.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:0:26:1:7:1/1:3:41:1:32:0/1:10:34:./.:.:.:.:.:.
chr10	126069208	HG2_10X_SVrefine210Xhap12_8196	C	CATGCTCCTCCCCTGACTCCTCATCTCCTCCATGCTCCTCCCGTCTCCCCAGCTCCTCTGTGCTCCTCCCAACTCCCCATCTCCTCCATGCTCCTCCCCTGACTCCG	20	PASS	ClusterIDs=HG2_PB_pbsv_11653:HG2_PB_assemblyticsfalcon_3450:HG2_PB_SVrefine2Falcon1plusDovetail_1495:HG2_PB_SVrefine2Falcon2Bionano_5629:HG2_PB_HySA_21200:HG2_Ill_SVrefine2DISCOVARplusDovetail_1736:HG2_10X_SVrefine210Xhap12_8196;NumClusterSVs=7;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8196:HG2_Ill_SVrefine2DISCOVARplusDovetail_1736;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0761905;ClusterMaxSizeDiff=0.0761905;ClusterMaxEditDist=0.164251;PBcalls=5;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=106;DistBack=14;DistForward=6886;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=10:126069209-126069208;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=716.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:21:0|1:25:2:4:21:1|0:0:40:32:1:0/1:17:5:./.:.:.:.:.:.
chr10	127197228	HG2_Ill_SVrefine2DISCOVARplusDovetail_1741	TTCAGTT	CATCTCAGAAAAACAAACAAACAAAAAATGCATGTGTGCATTCTGTATATGCCATACCTGGGCTCCTTCTATTACCTCTTAAACTATGAGAAATGAATTTTCTCACTTTATCTTTACTGGAATTTTGATCTAAAATACATTCTGTTGCTCAAATTTGACTAAATACTTCTAGGACAGAAATATGCAAAAATCCTTGTCTAGAGCAAGGTACTCCTGAGTTGGAGATGGGAAGGTAAGAAAAGAATGTGTAAGCATGGACACCCAAGCTGGAGTGCAGTGGTGTGATCACGGCTCACTGCAGCCTTGACCTCCTGGGCTCAAGCAATTCTCCCACTTCAGCCTCCCAAGTAGCTGGGACTCCAGGCATGTGCCACCATGCCCAGCTAATTTTTTGTATTTTTAATAGAGACGGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGGCCTCAAATCCGCCTGCTTTGGCCTTCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCGGGCTGCACACACGTTTTTTTGTGTGTTTGTTTGTTTTTGAGACGGAGTCTAGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAGGCACACATATTTTTAATGTCCCTTCCTGATATCATTACTTATCACCCCCATACCCTTGCCGCAGTCCAATGCCATCTGTGCCCCTGCCATGCTGCCTAGTAATGGGGATGCCCTGCATCTTATTAAAGGTGACTGACCCACCACTGAGCTATGGGCTTGCAACACAGAAATTCATTTTTTAATTAGATAATTGATGTTCTCCAGATTCTTCTCTTTCTTGCCATACAGTTTTTTTAACTTCAATTATTTTTGTCATTTACTCACCATCTTCTGTGGCAAATACATTCGTTTTTAAAAACTAATTTTATTTAATTAATTAATTTATTCGTTTTTGAGACGGAGTTTCGCTTTGTCACTCAGGCTGGAGTGCAGTGGTGCTATCTCAGCTCACTGCAACCTCCGCTTCCTGGGTTCAAGCGATTCTCCTGCCTCATGCTTGTAATTCTCTCTCTCCCGAGTAGCTGGAATTACAAGCATGCACCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCTCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCTG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3040:HG3_PB_HySA_17643:HG2_PB_assemblyticsPBcR_3368:HG2_PB_SVrefine2PBcRplusDovetail_1439:HG2_Ill_SVrefine2DISCOVARplusDovetail_1741:HG2_PB_assemblyticsfalcon_3463:HG2_PB_SVrefine2Falcon1plusDovetail_1500:HG3_PB_SVrefine2Falcon1Dovetail_7051:HG4_PB_SVrefine2PBcRDovetail_5878:HG2_PB_SVrefine2PB10Xhap12_8431;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1741:HG2_PB_SVrefine2PBcRplusDovetail_1439:HG2_PB_assemblyticsPBcR_3368;NumExactMatchSVs=3;ClusterMaxShiftDist=0.113627;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.152926;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=1220;DistBack=0;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=10:127197235-127197227;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9975;PctRecOverlap=0.9919;SizeDiff=3;StartDistance=-4;EndDistance=2;GTMatch=0;TruScore=99;MatchId=717.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:0|1:33:0:1:24:1|0:0:36:21:0:0/1:24:19:0/1:46:88:.:1290:.
chr10	127513335	HG2_Ill_MetaSV_680	G	GCCTCTGCTTAGATTGCTGCATTGGCTTTCTAGTTCATTTACAAGAAAATCAAGAGTCTTCACAATTGAGGGACGGAAAGGCAGCCTAGATGGCTGGATCAGAATAAGGAAGAGAGAGTGATAGGAAATAAAATCAGAGAGGTAATCATGAGTCATGATGAGCATGGAGGGGAGCATGGAGAGAAGCATGGATGCAGGATTAGAGGTGACACCATGGTGTGGGTATGTGATCAATCTTCCTTCCCTTACAAATTTTACTTTGGCTCTATGCCTTGAATGCCATCTCACCATTTTTCACTTAGAACTTTGACTGGCTCTTTTATTACTTTTGGGTTATAGAAATCAATGCTGCTTGTGTTAACATGGGAAATCTATCACACCACCACAGTCTTAATTCTAAATCACCTGGGAATGAGGGAC	20	PASS	ClusterIDs=HG3_Ill_MetaSV_661:HG2_PB_pbsv_11659:HG4_PB_HySA_17055:HG3_PB_pbsv_11368:HG2_PB_HySA_21228:HG4_PB_pbsv_11672:HG3_PB_HySA_17645:HG3_PB_SVrefine2Falcon1Dovetail_7052:HG2_PB_SVrefine2PBcRplusDovetail_1440:HG2_PB_SVrefine2PB10Xhap12_8432:HG2_PB_SVrefine2Falcon2Bionano_5634:HG2_PB_SVrefine2Falcon1plusDovetail_1501:HG2_Ill_MetaSV_680:HG4_PB_SVrefine2PBcRDovetail_5879:HG3_PB_SVrefine2PBcRDovetail_5465:HG2_PB_PB10Xdip_3041;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_680:HG2_PB_SVrefine2Falcon1plusDovetail_1501:HG2_PB_SVrefine2Falcon2Bionano_5634:HG2_PB_SVrefine2PB10Xhap12_8432:HG2_PB_SVrefine2PBcRplusDovetail_1440:HG3_PB_SVrefine2Falcon1Dovetail_7052;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0617577;ClusterMaxSizeDiff=0.0522565;ClusterMaxEditDist=0.268692;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=419;DistBack=118767;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=419;REFWIDENED=10:127513336-127513754;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=719.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:120:1/1:3:21:2:31:1/1:0:34:0:43:1/1:0:25:0/1:2:14:.:.:.
chr10	127846883	HG3_Ill_GATKHC_18753	G	GGAGGCACAGAGCATGGAGGGGAGGATGCACAGAGCACGGGGAGAGGATGCACAGAGCACAGGGAGGATGCACAGAGCACAGGGA	20	PASS	ClusterIDs=HG3_PB_HySA_17652:HG4_PB_HySA_17061:HG4_PB_pbsv_11673:HG2_PB_pbsv_11660:HG3_PB_pbsv_11370:HG2_PB_HySA_21236:HG4_Ill_GATKHCSBGrefine_8121:HG3_Ill_scalpel_11300:HG3_Ill_GATKHC_18753:HG3_Ill_GATKHCSBGrefine_7796:HG2_Ill_scalpel_11120:HG2_Ill_GATKHCSBGrefine_7898:HG2_Ill_250bpfermikitraw_15685:HG2_PB_PB10Xdip_3043;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15685:HG2_Ill_GATKHCSBGrefine_7898:HG2_Ill_scalpel_11120:HG3_Ill_GATKHCSBGrefine_7796:HG3_Ill_GATKHC_18753:HG3_Ill_scalpel_11300:HG4_Ill_GATKHCSBGrefine_8121;NumExactMatchSVs=7;ClusterMaxShiftDist=0.113636;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.247191;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=84;DistBack=-131;DistForward=21;DistMin=-131;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=122;REFWIDENED=10:127846816-127846937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:40:1/1:3:17:3:24:./.:3:35:3:19:./.:0:8:./.:.:.:.:.:.
chr10	129161103	HG2_PB_SVrefine2PB10Xhap12_8439	A	ACATGCACGTCCCCACACACACACATACACATACACATCCCCCCACACACACATACACATGTACATCTCCACACACACACATACACATCCCCACACACACATACACATGCACGTCCCCCCACACACATACACATGCACATCCCCACACACACACACACACACACATGCGCATCCCCACACACACACACACACATACACATCCCCCCACACACACACGCACATCCCCACACACACGTACACATGCACATCCCCACACACACACACATGCACCTCCCCC	10	PASS	ClusterIDs=HG2_PB_pbsv_11672:HG2_PB_SVrefine2PBcRplusDovetail_1446:HG2_PB_PB10Xdip_3072:HG2_PB_SVrefine2PB10Xhap12_8439:HG2_PB_SVrefine2Falcon2Bionano_5642:HG3_PB_SVrefine2PBcRDovetail_5475:HG3_PB_SVrefine2Falcon1Dovetail_7061:HG2_PB_SVrefine2Falcon1plusDovetail_1507:HG4_PB_SVrefine2Falcon1Dovetail_7095:HG4_PB_SVrefine2PBcRDovetail_5885:HG4_PB_HySA_17075:HG2_PB_HySA_21251;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5642:HG2_PB_SVrefine2PB10Xhap12_8439:HG2_PB_SVrefine2PBcRplusDovetail_1446;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0989399;ClusterMaxSizeDiff=0.084507;ClusterMaxEditDist=0.237288;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=276;DistBack=15;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=228;REFWIDENED=10:129161104-129161331;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=722.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:1/1:0:27:2:21:1/1:5:344:6:379:1/1:0:10:./.:.:.:.:.:.
chr10	129190292	HG2_PB_SVrefine2Falcon2Bionano_5643	A	AGCATCTGGCCTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5643:HG2_PB_SVrefine2PB10Xhap12_8441:HG2_PB_HySA_21252:HG2_Ill_breakscan11_4230:HG2_PB_pbsv_11674:HG3_PB_HySA_17675:HG3_PB_pbsv_11383:HG4_PB_SVrefine2Falcon1Dovetail_7096:HG3_Ill_MetaSV_669;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5643:HG3_Ill_MetaSV_669;NumExactMatchSVs=2;ClusterMaxShiftDist=0.186579;ClusterMaxSizeDiff=0.186579;ClusterMaxEditDist=0.232406;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=313;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=10:129190293-129190306;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=723.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:27:1|0:0:23:22:4:./.:0:4:12:0:0/1:31:14:0/1:6:40:.:.:.
chr10	129195131	HG3_PB_SVrefine2Falcon1Dovetail_7062	A	ATGAACATAAGTGACCCGGGACTCCGATCTGACAAGTTACGCAGCGACTCCTATGTGATCTGAGCATGAGCATGGGAGTCTCCTATGATCTGAGCATCAGTTACACGGGCAGTGTCTCCTATGTGATCTGAGCATGAGTTACACGGGCGGTGTCTCCTATGTGATCTGAGCATAGTTACACGGGCAGCGACTCCTATGTGATCTGAGCATCAGTTACACGGGCAGCGACTCCTATGTGATCTGAGCATAAGTTACACGGGCAGTGACTCCTATGTGATCTGAGCATGAGTTACACGCGGCGACTCCTATGTAACTGAGCATAGTTACAGCGTGTCTCCTATGTGATCTGAGCATGAGTTACACGGTGTGTCTCCTATGTGATCTGAGCATGAGTTACACGGGCAGTGTCTCCTATGTGATCTGAGCATCAGTTACACGGGCAGCGACTCCTATGTGATCTGAGCATGAGTTACACGGGCAGACTCCTATGTGATC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7062:HG2_PB_assemblyticsfalcon_3485:HG4_PB_pbsv_11685:HG3_PB_assemblyticsfalcon_3431:HG2_PB_SVrefine2Falcon1plusDovetail_1508:HG4_PB_SVrefine2Falcon1Dovetail_7097:HG3_PB_SVrefine2Falcon1Dovetail_7063:HG2_PB_HySA_21254:HG4_PB_HySA_17077:HG2_PB_SVrefine2PBcRplusDovetail_1447;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7062;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147638;ClusterMaxSizeDiff=0.145669;ClusterMaxEditDist=0.325;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=494;DistBack=774;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=785;REFWIDENED=10:129195147-129195931;PctSeqSimilarity=0.9573;PctSizeSimilarity=0.9286;PctRecOverlap=0.9174;SizeDiff=-38;StartDistance=-25;EndDistance=-25;GTMatch=0;TruScore=93;MatchId=724.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:35:0|1:22:1:1:25:0/0:11:0:7:1:0/0:19:0:0/1:9:9:.:.:.
chr10	129227238	HG2_PB_assemblyticsfalcon_3487	A	ATGTGGATTGGGGTGCCGTGTGGATTGGGGTGCCGTGTGGATTGGGGTGCCG	20	PASS	ClusterIDs=HG3_PB_HySA_17676:HG4_Ill_svaba_14688:HG4_PB_pbsv_11686:HG4_Ill_GATKHCSBGrefine_8125:HG3_PB_pbsv_11384:HG3_Ill_svaba_14799:HG3_Ill_GATKHC_18777:HG2_PB_assemblyticsfalcon_3487:HG2_PB_assemblyticsPBcR_3392:HG2_Ill_svaba_14621:HG4_PB_HySA_17079;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_svaba_14621:HG2_PB_assemblyticsPBcR_3392:HG2_PB_assemblyticsfalcon_3487:HG3_Ill_GATKHC_18777:HG3_Ill_svaba_14799:HG4_Ill_GATKHCSBGrefine_8125:HG4_Ill_svaba_14688;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0925926;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.303571;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=6826;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=28;REFWIDENED=10:129227237-129227267;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=725.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:./.:14:6:3:26:./.:4:14:20:45:./.:0:0:./.:.:.:.:.:.
chr10	129300709	HG2_Ill_SVrefine2DISCOVARplusDovetail_1754	G	GTAAATATGATGAAATATTTGTAAATATGATGTAAATATTTGTAAATATGAAATATTATTCCCATCATGATGCTCTCTTGTATGGCACAGTTGATCT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1754:HG2_PB_pbsv_11677:HG2_PB_SVrefine2Falcon2Bionano_5644:HG3_PB_pbsv_11385;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1754:HG2_PB_SVrefine2Falcon2Bionano_5644;NumExactMatchSVs=2;ClusterMaxShiftDist=0.050505;ClusterMaxSizeDiff=0.040404;ClusterMaxEditDist=0.247525;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=96;DistBack=20103;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=197;REFWIDENED=10:129300710-129300906;PctSeqSimilarity=0.9951;PctSizeSimilarity=0.9897;PctRecOverlap=0.9588;SizeDiff=-1;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=726.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:16:0|1:35:0:2:17:./.:7:8:5:0:0/1:18:14:./.:.:.:.:.:.
chr10	129808809	HG2_Ill_Krunchall_16084	C	CCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8213:HG3_Ill_Krunchall_15768:HG2_PB_pbsv_11683:HG2_Ill_Krunchall_16084;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_Krunchall_16084:HG3_Ill_Krunchall_15768;NumExactMatchSVs=2;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.231405;PBcalls=1;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=55;DistBack=66044;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=10:129808810-129808864;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=727.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:23:./.:12:12:13:8:./.:1:4:3:4:0/1:9:22:./.:.:.:.:.:.
chr10	130262625	HG4_PB_SVrefine2Falcon1Dovetail_7105	T	TTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCTCCCCTCTAGACTTCTCCTCCTCCTCCACATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCATCCTCCCCTCTAGACTTTCTCCTCCTCCTCATCTCCCCTCTAGACTTCTCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCCTTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCATCCTCCCCTAGACTTTCCTCCTCCTCCCATCCTCCCCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCACCATCCTCCTCTAGACTTCTCCTCCTCCTCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCTCCTCCTCTAGACTTCTCCTCCTCTCCCCATCCTCCCCTCTAGACTTCTCCTCTCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCTCTAGACTTCTCCTCCTCCTCCACCATCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCACCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCCTCCCCATCCTCCCCTCTAGACTTCTCCTCCTCTCTCCACATCCTCCCCTCTAGACTTCTCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7069:HG2_PB_pbsv_11687:HG2_PB_SVrefine2Falcon1plusDovetail_1515:HG2_PB_assemblyticsfalcon_3501:HG2_PB_HySA_21276:HG2_PB_HySA_21275:HG2_PB_assemblyticsPBcR_3409:HG3_PB_assemblyticsfalcon_3445:HG4_PB_assemblyticsfalcon_3380:HG4_PB_SVrefine2Falcon1Dovetail_7105:HG2_PB_SVrefine2Falcon2Bionano_5647:HG2_PB_SVrefine2PB10Xhap12_8448:HG2_PB_SVrefine2PBcRplusDovetail_1452;NumClusterSVs=13;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_7105;NumExactMatchSVs=1;ClusterMaxShiftDist=0.338596;ClusterMaxSizeDiff=0.338596;ClusterMaxEditDist=0.36037;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=3138;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=264;REFWIDENED=10:130262626-130262889;PctSeqSimilarity=0.9796;PctSizeSimilarity=0.977;PctRecOverlap=0.9546;SizeDiff=-74;StartDistance=-109;EndDistance=-109;GTMatch=0;TruScore=97;MatchId=728.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:90:./.:0:2:1:1:./.:9:62:4:29:./.:3:4:./.:8:95:.:3335:.
chr10	131578128	HG2_PB_SVrefine2Falcon2Bionano_5653	T	TCTCCTCCCCCTCTCCCTTCTCCTCTTCCCGCTCTCCCTTCTCCTCTTCCCGCTCTCCCTTCTCCTCTTCCTGCTCTCCCTTCTCCTCTTCCCCCTCTCCCTTCTCCTCTTCCCCCTCTCCCTTCTCCTCTTCCCCCTCTCCCTTCTCCTCTTCCCCCTCTCCCTTCTCCTCTTCCCCCTCTCCCTTCTCCTCTTCCCCCCTCCTCTTCCCCCTCTCCCTTCTCCTCTTCCCCCCTCCCTCCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1522:HG2_PB_HySA_21295:HG2_PB_PB10Xdip_3103:HG2_PB_assemblyticsfalcon_3522:HG2_PB_SVrefine2Falcon1plusDovetail_1523:HG3_PB_SVrefine2Falcon1Dovetail_7076:HG3_PB_pbsv_11406:HG4_PB_SVrefine2Falcon1Dovetail_7109:HG3_PB_SVrefine2PBcRDovetail_5486:HG4_PB_pbsv_11701:HG2_PB_SVrefine2PB10Xhap12_8454:HG2_PB_SVrefine2Falcon2Bionano_5653:HG2_PB_SVrefine2PBcRplusDovetail_1457;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5653:HG2_PB_SVrefine2PB10Xhap12_8454;NumExactMatchSVs=2;ClusterMaxShiftDist=0.280778;ClusterMaxSizeDiff=0.280778;ClusterMaxEditDist=0.376106;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=243;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=320;REFWIDENED=10:131578129-131578448;PctSeqSimilarity=0.9772;PctSizeSimilarity=0.9712;PctRecOverlap=0.3539;SizeDiff=7;StartDistance=-154;EndDistance=-154;GTMatch=1;TruScore=76;MatchId=729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:37:1/1:1:16:1:21:./.:1:2:2:6:./.:0:1:./.:.:.:.:.:.
chr10	131880073	HG2_Ill_SVrefine2DISCOVARplusDovetail_1770	T	TCATTGCATTGACACTTTTATCAATAAAAATGAAAGAATGAAAATTAATTAATAATTCCCAGCCAGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTAAGGCAGGCAGATCGCTTGAGGCCAGGAGTTTGAGACCAACCTGGGCAATATGGTACCCTGTCTCTACCAAAAAATATAAAAATTAGCCAGGCATGGTGGTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGGAAGATTGAGCCCATAAGGCTGAGGCTGAAGTGAGCTGACATCATGCCACTGCACTCCACCCTGGGTAACAGAGTGAGACTGTCTCAAAAAATAAATAATAACAATAATAATTCCCAGCTCATAAAAACTAGGAAAAGAACAAGAAAGCAAAACAAAAGAAAACACAAAGAAAAAATAAAGGAAAAAGCTAAAATTAATGAGAAAAAAGAATATATAAGATAAAATTAATGAGGTAGAGAATAGAAAAACAGTAGATCTAATGTACAAATATAAATCCTGGTTTTTGGAGGGAAAAAAGTAGATAAACCACTAGTTAAGTTACTCAAGAAAAAGGAGGAGTGAATACAAAAATAGAAAATAAGAAAGGACACAGGGGAAATAACCAATGAAACAAGAAATTATAAAAATCTTAAGGGAATATTTCACAGACCTCTATGCAAATGAATTTGAAAAATGTAGATGTAACTGATAACTTCCTAAGGATAGTCTGATTACCAAAACTGATCCCATTAGAGTTAGAAAGCTTAAACTGATGATTTCCCAGAAGAAACAGAAAGAGTTATTAAGTAACTACCCACAAGCCCAAGGACCAGACGGTTTCCCAGGAGAATTCTCCCAAACCTTCAAAGGCCAGGTAATGCCAATGCTCTATGAAGAAGATTCTAGCACACTATCTCCTTTTATCAAGCAAATGTAACACTGATAAGCCAGACAGAAAGTACAAGAAAATACAACTACACACCAATCAGTTGCTCGGTATCGATGTAAAAATATGAAATGAGGTCTAAGATATTCGAAATATTAGGAAACTATATAATGTACTATATTAATAAACATAAGGAAGTAGTGTGATGACCTCCATAGATTCTGAAAAATCCTTTAACAAAATTTAAAACCTATTTACGATAAAAGTTAAAGAAAACAGGAATTGAGGGTTATACTGTTAAATTAATAAAATACACATTCCTTAATTCATTACTAAATGGGGGAAAAACTAATAGCATTTCTACTACTATCAGGACAGGGCAAAGATGCTCACTGTCTCCATTTCTGTTCAACACTGTATGAGAGGTATTACCCAATATATTGAGACGAGAGAAATCAATCAGCATTATAAAAAGGGGTAAAGTAGTAAAACCACTTCTATTTGCAGTTGAAAACCATATATATATATATCTGGAAACCCCCAGAGAATCAATAATAAAATTAACTCAAACAATAAAAGAATTCACTAACACAGAATTAACATACAAAAATCAATAGCTTTCAAATACAAAATAATAATCAGAGAAAACGCCATTTAAAATAATTGCAACAAGGATTAAATATCTAGGAACAAATTTAACAAGAATTGCACAAAATCTATACAAGGAGAATGTAAGGCATTCTTGAAAGACACTAAAGTAGATATGAACAAGAGAAAAGACATCCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4231:HG4_PB_pbsv_11704:HG2_PB_pbsv_11704:HG2_PB_SVrefine2Falcon1plusDovetail_1525:HG4_PB_SVrefine2PBcRDovetail_5896:HG4_Ill_SVrefine2DISCOVARDovetail_8429:HG3_PB_SVrefine2Falcon1Dovetail_7078:HG3_Ill_SVrefine2DISCOVARDovetail_8642:HG2_PB_SVrefine2PBcRplusDovetail_1459:HG2_PB_SVrefine2PB10Xhap12_8457:HG2_PB_SVrefine2Falcon2Bionano_5655:HG2_Ill_SVrefine2DISCOVARplusDovetail_1770:HG2_10X_SVrefine210Xhap12_8225:HG4_PB_SVrefine2Falcon1Dovetail_7111:HG4_PB_HySA_17101:HG2_PB_PB10Xdip_3105;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8225:HG2_Ill_SVrefine2DISCOVARplusDovetail_1770:HG2_PB_SVrefine2Falcon2Bionano_5655:HG2_PB_SVrefine2PB10Xhap12_8457:HG2_PB_SVrefine2PBcRplusDovetail_1459:HG3_Ill_SVrefine2DISCOVARDovetail_8642:HG3_PB_SVrefine2Falcon1Dovetail_7078;NumExactMatchSVs=7;ClusterMaxShiftDist=0.041472;ClusterMaxSizeDiff=0.0397196;ClusterMaxEditDist=0.144585;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1678;DistBack=25856;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=10:131880074-131880075;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=730.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:./.:2:2:0:3:1/1:0:10:0:12:1/1:0:48:./.:18:211:.:1689:.
chr10	131894833	HG2_Ill_250bpfermikitraw_15742	A	AAGAAAATGTGGTACATATATACCATGGAATACTATGCAGCCCTCAAAAAGGATGAGTTCATGTCCTTTGCAGGGACATGGATGAAGCTGGAAACCATC	20	PASS	ClusterIDs=HG3_PB_pbsv_11409:HG3_PB_assemblyticsfalcon_3463:HG2_PB_pbsv_11705:HG4_PB_pbsv_11705:HG2_PB_assemblyticsfalcon_3526:HG2_PB_assemblyticsPBcR_3425:HG4_PB_HySA_17102:HG2_PB_PB10Xdip_3106:HG2_PB_HySA_21300:HG4_Ill_svaba_14717:HG4_Ill_GATKHCSBGrefine_8142:HG4_Ill_250bpfermikitraw_15604:HG3_PB_SVrefine2Falcon1Dovetail_7079:HG3_Ill_svaba_14828:HG3_Ill_manta_2702:HG3_Ill_Spiral_12317:HG3_Ill_SVrefine2DISCOVARDovetail_8643:HG3_Ill_GATKHCSBGrefine_7812:HG3_Ill_250bpfermikitraw_15309:HG2_PB_SVrefine2PBcRplusDovetail_1460:HG2_PB_SVrefine2PB10Xhap12_8458:HG2_PB_SVrefine2Falcon2Bionano_5656:HG2_PB_SVrefine2Falcon1plusDovetail_1526:HG2_Ill_svaba_14657:HG2_Ill_manta_3303:HG2_Ill_SVrefine2DISCOVARplusDovetail_1771:HG2_Ill_GATKHCSBGrefine_7924:HG2_Ill_250bpfermikitraw_15742:HG2_Ill_150bpfermikitraw_14831:HG2_10X_SVrefine210Xhap12_8226:HG4_PB_SVrefine2Falcon1Dovetail_7112:HG4_PB_SVrefine2PBcRDovetail_5897:HG3_PB_HySA_17712;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8226:HG2_Ill_150bpfermikitraw_14831:HG2_Ill_250bpfermikitraw_15742:HG2_Ill_GATKHCSBGrefine_7924:HG2_Ill_SVrefine2DISCOVARplusDovetail_1771:HG2_Ill_manta_3303:HG2_Ill_svaba_14657:HG2_PB_SVrefine2Falcon1plusDovetail_1526:HG2_PB_SVrefine2Falcon2Bionano_5656:HG2_PB_SVrefine2PB10Xhap12_8458:HG2_PB_SVrefine2PBcRplusDovetail_1460:HG3_Ill_250bpfermikitraw_15309:HG3_Ill_GATKHCSBGrefine_7812:HG3_Ill_SVrefine2DISCOVARDovetail_8643:HG3_Ill_Spiral_12317:HG3_Ill_manta_2702:HG3_Ill_svaba_14828:HG3_PB_SVrefine2Falcon1Dovetail_7079:HG4_Ill_250bpfermikitraw_15604:HG4_Ill_GATKHCSBGrefine_8142:HG4_Ill_svaba_14717;NumExactMatchSVs=21;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.103093;ClusterMaxEditDist=0.247525;PBcalls=17;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=98;DistBack=14569;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=10:131894834-131894834;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=731.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:./.:2:5:0:19:./.:1:5:0:1:1/1:0:37:./.:.:.:.:.:.
chr10	132001989	HG2_PB_SVrefine2Falcon1plusDovetail_1527	G	GCCTGCCCCTCCCGCCTCCACCTGCCCCTCCCGCCTCCACCTGCCCCTCCCGCCTCCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3107:HG3_PB_pbsv_11411:HG3_PB_HySA_17717:HG2_PB_pbsv_11706:HG3_Ill_SVrefine2DISCOVARDovetail_8645:HG2_PB_SVrefine2PBcRplusDovetail_1461:HG2_PB_SVrefine2Falcon1plusDovetail_1527;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1527:HG2_PB_SVrefine2PBcRplusDovetail_1461:HG3_Ill_SVrefine2DISCOVARDovetail_8645;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0695652;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.26087;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=57;DistBack=-55;DistForward=-1;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=85;REFWIDENED=10:132001990-132002074;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=732.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:12:21:./.:5:14:6:6:./.:3:0:4:0:./.:3:1:./.:.:.:.:.:.
chr10	132053009	HG3_Ill_GATKHCSBGrefine_7813	T	TCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAG	20	PASS	ClusterIDs=HG3_PB_pbsv_11412:HG3_PB_assemblyticsfalcon_3467:HG4_PB_pbsv_11707:HG2_PB_pbsv_11707:HG2_PB_SVrefine2Falcon2Bionano_5657:HG2_PB_HySA_21303:HG3_Ill_MetaSV_675:HG3_Ill_GATKHCSBGrefine_7813:HG2_Ill_MetaSV_687:HG2_Ill_GATKHCSBGrefine_7925:HG3_PB_SVrefine2Falcon1Dovetail_7080:HG3_PB_HySA_17718;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7925:HG2_Ill_MetaSV_687:HG3_Ill_GATKHCSBGrefine_7813:HG3_Ill_MetaSV_675;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0971524;ClusterMaxSizeDiff=0.0837521;ClusterMaxEditDist=0.221498;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=290;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=10:132053010-132053017;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:./.:14:6:8:18:1|0:0:6:21:0:0/1:27:13:./.:.:.:.:.:.
chr10	132145571	HG2_PB_SVrefine2PB10Xhap12_8460	T	TCTGTTAAAGAATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_21307:HG3_PB_pbsv_11413:HG3_PB_HySA_17722:HG2_PB_pbsv_11708:HG4_PB_pbsv_11708:HG2_PB_assemblyticsPBcR_3433:HG3_PB_assemblyticsfalcon_3470:HG2_PB_assemblyticsfalcon_3533:HG2_PB_PB10Xdip_3110:HG4_Ill_MetaSV_710:HG4_Ill_GATKHCSBGrefine_8143:HG3_Ill_MetaSV_676:HG2_PB_SVrefine2PBcRplusDovetail_1462:HG2_PB_SVrefine2PB10Xhap12_8460:HG2_Ill_GATKHCSBGrefine_7926:HG4_PB_SVrefine2Falcon1Dovetail_7113:HG3_Ill_GATKHCSBGrefine_7814:HG3_PB_SVrefine2Falcon1Dovetail_7081:HG2_PB_SVrefine2Falcon2Bionano_5658:HG2_PB_SVrefine2Falcon1plusDovetail_1528:HG2_10X_SVrefine210Xhap12_8233:HG4_PB_HySA_17108;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7926:HG2_PB_SVrefine2PB10Xhap12_8460:HG2_PB_SVrefine2PBcRplusDovetail_1462:HG3_Ill_MetaSV_676:HG4_Ill_GATKHCSBGrefine_8143;NumExactMatchSVs=5;ClusterMaxShiftDist=0.140351;ClusterMaxSizeDiff=0.137715;ClusterMaxEditDist=0.206119;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=321;DistBack=-10;DistForward=-1;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=10:132145572-132145586;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=734.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:2:19:0:17:./.:0:7:0:4:1/1:0:12:1/1:2:66:.:.:.
chr10	132767832	HG4_Ill_150bpfermikitraw_15001	C	CTCAGTACAGCTATTAAATATATATATAAATATATATAAATATATAAATAAATATATATATATAAATATATATATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_11729:HG2_Ill_breakscan11_4233:HG2_PB_pbsv_11733:HG4_PB_HySA_17130:HG2_PB_assemblyticsfalcon_3555:HG4_Ill_svaba_14741:HG4_Ill_Krunchall_16379:HG4_Ill_GATKHC_18941:HG4_Ill_GATKHCSBGrefine_8155:HG4_Ill_250bpfermikitraw_15619:HG4_Ill_150bpfermikitraw_15001:HG2_Ill_svaba_14682:HG2_Ill_manta_3306:HG2_Ill_SpiralSDKrefine_2267:HG2_Ill_Krunchall_16124:HG2_Ill_GATKHC_18929:HG2_Ill_GATKHCSBGrefine_7939:HG2_Ill_250bpfermikitraw_15765:HG2_Ill_150bpfermikitraw_14851;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14851:HG2_Ill_250bpfermikitraw_15765:HG2_Ill_GATKHCSBGrefine_7939:HG2_Ill_GATKHC_18929:HG2_Ill_Krunchall_16124:HG2_Ill_SpiralSDKrefine_2267:HG2_Ill_manta_3306:HG2_Ill_svaba_14682:HG4_Ill_150bpfermikitraw_15001:HG4_Ill_250bpfermikitraw_15619:HG4_Ill_GATKHCSBGrefine_8155:HG4_Ill_GATKHC_18941:HG4_Ill_Krunchall_16379:HG4_Ill_svaba_14741;NumExactMatchSVs=14;ClusterMaxShiftDist=0.075;ClusterMaxSizeDiff=0.075;ClusterMaxEditDist=0.209877;PBcalls=4;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=77;DistBack=10390;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=10:132767833-132767839;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=735.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:14:0|1:31:1:0:13:0|1:19:0:0:17:0/1:29:29:./.:.:.:.:.:.
chr10	133520600	HG4_Ill_scalpel_10864	C	CATACACATGCATGCACACACAAGACACACAAATATACACATAAACACAGG	20	PASS	ClusterIDs=HG2_PB_HySA_21369:HG4_PB_pbsv_11749:HG2_PB_pbsv_11758:HG3_Ill_Spiral_12350:HG3_Ill_Krunchall_15828:HG3_Ill_GATKHC_18863:HG3_Ill_GATKHCSBGrefine_7851:HG3_Ill_250bpfermikitraw_15348:HG3_Ill_150bpfermikitraw_14893:HG2_Ill_scalpel_11180:HG2_Ill_Krunchall_16142:HG2_Ill_GATKHC_18960:HG2_Ill_GATKHCSBGrefine_7958:HG2_Ill_250bpfermikitraw_15788:HG2_Ill_150bpfermikitraw_14871:HG2_PB_PB10Xdip_3135:HG4_Ill_svaba_14760:HG4_Ill_scalpel_10864:HG4_Ill_Krunchall_16398:HG4_Ill_GATKHC_18964:HG4_Ill_GATKHCSBGrefine_8173:HG4_Ill_FB_10226:HG4_Ill_250bpfermikitraw_15642:HG4_Ill_150bpfermikitraw_15021:HG3_Ill_svaba_14880:HG2_Ill_svaba_14703:HG2_Ill_scalpel_11179:HG2_Ill_Krunchall_16141:HG2_Ill_GATKHC_18959:HG2_Ill_GATKHCSBGrefine_7957:HG2_Ill_FB_10258:HG2_Ill_250bpfermikitraw_15787:HG2_Ill_150bpfermikitraw_14870;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14870:HG2_Ill_250bpfermikitraw_15787:HG2_Ill_FB_10258:HG2_Ill_GATKHCSBGrefine_7957:HG2_Ill_GATKHC_18959:HG2_Ill_Krunchall_16141:HG2_Ill_scalpel_11179:HG2_Ill_svaba_14703:HG3_Ill_svaba_14880:HG4_Ill_150bpfermikitraw_15021:HG4_Ill_250bpfermikitraw_15642:HG4_Ill_FB_10226:HG4_Ill_GATKHCSBGrefine_8173:HG4_Ill_GATKHC_18964:HG4_Ill_Krunchall_16398:HG4_Ill_scalpel_10864:HG4_Ill_svaba_14760;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0961538;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.15534;PBcalls=4;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=50190;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=10:133520601-133520702;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:1:29:1:31:1/1:2:80:3:123:1/1:0:26:./.:.:.:.:.:.
chr10	133522741	HG3_PB_SVrefine2PBcRDovetail_5501	T	TCACTCTCACACTCACTCTCACACACTCACAGACACTCTCACACACATTCACACACTCCTGCTCTCACACACTCTCACACTCACACACTCACACTCACACACTCACACAATTCACACACAATCACACTCAACACACACGAGTTGGTTTACACTCACACACTCACAGACACACACTCACACACATTCACAATCACACTCAACACACATACACGAGTTGGTTTA	20	PASS	ClusterIDs=HG3_PB_pbsv_11460:HG3_Ill_MetaSV_685:HG2_PB_SVrefine2Falcon1plusDovetail_1554:HG3_PB_SVrefine2Falcon1Dovetail_7114:HG2_PB_pbsv_11759:HG4_PB_SVrefine2Falcon1Dovetail_7141:HG3_PB_SVrefine2PBcRDovetail_5501:HG3_Ill_SVrefine2DISCOVARDovetail_8665:HG2_PB_SVrefine2Falcon2Bionano_5681:HG2_10X_SVrefine210Xhap12_8255;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8255:HG2_PB_SVrefine2Falcon2Bionano_5681:HG3_Ill_SVrefine2DISCOVARDovetail_8665:HG3_PB_SVrefine2PBcRDovetail_5501:HG4_PB_SVrefine2Falcon1Dovetail_7141;NumExactMatchSVs=5;ClusterMaxShiftDist=0.083151;ClusterMaxSizeDiff=0.0568928;ClusterMaxEditDist=0.273913;PBcalls=7;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=221;DistBack=5;DistForward=101;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=102;REFWIDENED=10:133522742-133522843;PctSeqSimilarity=0.9902;PctSizeSimilarity=0.9822;PctRecOverlap=0.8578;SizeDiff=-4;StartDistance=-30;EndDistance=-30;GTMatch=0;TruScore=94;MatchId=742.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:31:0|1:39:2:5:34:1|0:1:33:30:0:0/1:30:9:./.:.:.:.:.:.
chr10	133763584	HG3_PB_SVrefine2Falcon1Dovetail_7117	T	TGTACATGACCGCCAAACATGACGTGGAGACTGGAAAGGAGTCAGAGAACATCTAGAAATGACAAGTATGATACATGACTGCCAAACATGACGTGGAGACTGGAAAGGAGTCGAGAACATCTAGAAATGACAAGTATGATACATGACCGCCAACATGACGTGGAGACTGGAAAGGAGTCAGAGAACATCTAGAAATGACAAGTATGATACATGACCGCCAAACATGACGTGGAGACTGGAAAGGAGTCAGAGAACATCTAGAAATGACAAGTATGATACATGACCGCCAAACATGACGTGGAGACTGAAAGGAGTCAGAACATCTAGAAATGACAAGTATG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5686:HG2_PB_pbsv_11767:HG3_PB_SVrefine2Falcon1Dovetail_7117:HG4_PB_pbsv_11761:HG4_PB_SVrefine2Falcon1Dovetail_7151:HG2_PB_SVrefine2Falcon1plusDovetail_1562;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7117;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0515021;ClusterMaxSizeDiff=0.0486409;ClusterMaxEditDist=0.190476;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=340;DistBack=307;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=414;REFWIDENED=10:133763172-133763585;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9855;PctRecOverlap=0.2261;SizeDiff=-5;StartDistance=265;EndDistance=265;GTMatch=0;TruScore=73;MatchId=744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:24:0|1:13:2:5:18:0/0:13:0:15:0:0/0:31:0:0/1:10:6:.:.:.
chr10	133968489	HG3_PB_SVrefine2Falcon1Dovetail_7120	G	GGATGATGGTGATTATGATGATGATAATGGTTATGGTGATGACGGTGGTGGTGATGATGATGATCATGATGATGGTGGTAGTGGCAATGGTGATGATGATGGTGATCATGGCGGTGATCATGATGGTGGTGGTAGTGGTGATGGTGGTGGTGATGATGGCAATGATCATGATGGTGGTGGTAGTGGTGATGGTGATGATGATGGTGATCATGGTGACGATCATGATGGTGGTGGTGGTGATGGTGGTGGTGATGATGGCAATGATCATGATGGTGGTGGTGGTAGTGGCAATGGTGACGATGATGGTGATCATGGTGATGATCATGATGGTGGTGGTCATGGTGATGGTGATAATAGTGGTGATGATGCTGGTGGTAGT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_700:HG3_PB_HySA_17782:HG3_PB_pbsv_11474:HG2_PB_pbsv_11772:HG4_PB_pbsv_11769:HG2_Ill_breakscan11_4237:HG2_PB_HySA_21398:HG3_PB_HySA_17781:HG4_PB_HySA_17178:HG2_Ill_GATKHCSBGrefine_7964:HG4_Ill_GATKHCSBGrefine_8182:HG3_Ill_MetaSV_687:HG3_Ill_GATKHCSBGrefine_7858:HG2_PB_PB10Xdip_3156:HG3_PB_assemblyticsfalcon_3543:HG4_PB_SVrefine2Falcon1Dovetail_7154:HG2_PB_SVrefine2PB10Xhap12_8500:HG4_PB_SVrefine2PBcRDovetail_5924:HG3_PB_SVrefine2PBcRDovetail_5508:HG3_PB_SVrefine2Falcon1Dovetail_7120:HG3_Ill_SVrefine2DISCOVARDovetail_8672:HG2_PB_SVrefine2Falcon2Bionano_5688:HG2_PB_SVrefine2Falcon1plusDovetail_1564:HG2_PB_SVrefine2PBcRplusDovetail_1488;NumClusterSVs=24;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1564:HG2_PB_SVrefine2Falcon2Bionano_5688:HG3_Ill_SVrefine2DISCOVARDovetail_8672:HG3_PB_SVrefine2Falcon1Dovetail_7120:HG3_PB_SVrefine2PBcRDovetail_5508;NumExactMatchSVs=5;ClusterMaxShiftDist=0.172414;ClusterMaxSizeDiff=0.172414;ClusterMaxEditDist=0.27907;PBcalls=17;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=378;DistBack=-24;DistForward=-1;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=275;REFWIDENED=10:133968490-133968764;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9841;PctRecOverlap=0.9314;SizeDiff=6;StartDistance=-23;EndDistance=-23;GTMatch=0;TruScore=96;MatchId=745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:37:1/1:0:16:2:22:1/1:0:22:2:27:1/1:0:28:1/1:1:37:.:2899:.
chr10	134257457	HG2_PB_SVrefine2PB10Xhap12_8519	C	CCCCTCCCCCTCACTCCTCTCCCCTCTCCTCAGGGCTCCCTGGCTTCCTGCCTCACCCTTCCCCTCCCCCCACTCCCCTCCCCTTCCTCAGGGCTCCCTCCCCTCCTCACTCCCTCCCCGCTCACTCCCCTCCCCTTCCTCAGGGCCCCCTCCCCACTCACTCCCACCCCACTCACTCCCCTCCCCTTCTTCAGGGCTCCCTCCCCCCCCACTCCCTCCCCGCTCACTCCCTCTGGCCTCTCCTCAGGGCTCCCTTCCCCCTGTCACTCCCTCCCTGCTCAATCCCTCTCCCCTTCCTCAGGGCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1579:HG2_PB_pbsv_11804:HG2_PB_PB10Xdip_3206:HG3_PB_pbsv_11498:HG2_PB_HySA_21426:HG3_PB_HySA_17806:HG3_PB_SVrefine2Falcon1Dovetail_7137:HG2_PB_SVrefine2Falcon2Bionano_5703:HG4_PB_SVrefine2Falcon1Dovetail_7170:HG4_PB_SVrefine2PBcRDovetail_5933:HG3_PB_SVrefine2PBcRDovetail_5517:HG2_PB_SVrefine2PB10Xhap12_8519:HG2_PB_SVrefine2PBcRplusDovetail_1498;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8519:HG3_PB_SVrefine2PBcRDovetail_5517;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0467446;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.262023;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=304;DistBack=1378;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=216;REFWIDENED=10:134257458-134257673;PctSeqSimilarity=0.9801;PctSizeSimilarity=0.9967;PctRecOverlap=0.7672;SizeDiff=-1;StartDistance=-71;EndDistance=-71;GTMatch=0;TruScore=91;MatchId=749.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:0:8:0:22:./.:2:10:0:10:./.:0:4:1/1:1:10:.:.:.
chr10	134490455	HG3_Ill_GATKHCSBGrefine_7864	C	CAGACCCACAGGTTTTCACATGGTGACCCCCACCATCACCCAGGCACCTGTCCTGAACTGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8528:HG2_PB_PB10Xdip_3218:HG3_PB_HySA_17827:HG2_PB_HySA_21442:HG4_Ill_GATKHC_19007:HG3_PB_pbsv_11510:HG4_Ill_GATKHCSBGrefine_8187:HG2_PB_pbsv_11814:HG3_PB_assemblyticsfalcon_3583:HG4_PB_pbsv_11805:HG3_Ill_GATKHC_18899:HG3_Ill_GATKHCSBGrefine_7864:HG2_Ill_GATKHC_19006:HG2_Ill_GATKHCSBGrefine_7977:HG4_PB_HySA_17207:HG2_PB_SVrefine2PBcRplusDovetail_1505;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7977:HG2_Ill_GATKHC_19006:HG3_Ill_GATKHCSBGrefine_7864:HG3_Ill_GATKHC_18899:HG3_PB_assemblyticsfalcon_3583:HG4_Ill_GATKHCSBGrefine_8187:HG4_Ill_GATKHC_19007;NumExactMatchSVs=7;ClusterMaxShiftDist=0.211382;ClusterMaxSizeDiff=0.211382;ClusterMaxEditDist=0.357724;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=60;DistBack=-95;DistForward=9;DistMin=-95;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=230;REFWIDENED=10:134490411-134490640;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=752.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:25:./.:18:6:3:18:./.:2:1:2:3:./.:14:1:./.:.:.:.:.:.
chr10	134556715	HG4_PB_pbsv_11808	C	CCCAGCAGGACGGGCCCGGGAGTGTGAGGGGCAGCTCCCACCCACCAGCCGCTGCACTTCAGCCCCAGCAGGGGACGGGCCCCATGGGAGTGAGGCAGCCCACCCACCAGCGCTGCACTCAG	10	PASS	ClusterIDs=HG4_PB_pbsv_11808:HG4_PB_SVrefine2PBcRDovetail_5940:HG2_PB_SVrefine2Falcon2Bionano_5711:HG2_PB_pbsv_11817;NumClusterSVs=4;ExactMatchIDs=HG4_PB_pbsv_11808;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0669456;ClusterMaxSizeDiff=0.041841;ClusterMaxEditDist=0.272727;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=121;DistBack=12;DistForward=209;DistMin=12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=353;REFWIDENED=10:134556633-134556985;PctSeqSimilarity=0.9528;PctSizeSimilarity=0.9587;PctRecOverlap=0.3967;SizeDiff=5;StartDistance=71;EndDistance=71;GTMatch=0;TruScore=76;MatchId=753.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:22:0|1:26:2:4:20:./.:4:0:6:0:0/1:35:4:./.:.:.:.:.:.
chr10	134581316	HG2_Ill_GATKHCSBGrefine_7985	C	CGCCCAGTGGCATTCCAGAAAGATCTGTGGACCCCGACCCTCAACGTTCCCAGGGTGCCCACGCTG	20	PASS	ClusterIDs=HG3_PB_pbsv_11516:HG2_PB_HySA_21445:HG2_PB_PB10Xdip_3222:HG4_Ill_scalpel_10895:HG4_Ill_GATKHC_19016:HG4_Ill_GATKHCSBGrefine_8190:HG4_Ill_250bpfermikitraw_15679:HG3_PB_assemblyticsfalcon_3592:HG3_Ill_scalpel_11388:HG3_Ill_GATKHC_18902:HG3_Ill_GATKHCSBGrefine_7867:HG2_PB_assemblyticsPBcR_3526:HG2_Ill_scalpel_11203:HG2_Ill_GATKHC_19015:HG2_Ill_GATKHCSBGrefine_7985:HG3_PB_HySA_17830;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7985:HG2_Ill_GATKHC_19015:HG2_Ill_scalpel_11203:HG2_PB_assemblyticsPBcR_3526:HG3_Ill_GATKHCSBGrefine_7867:HG3_Ill_GATKHC_18902:HG3_Ill_scalpel_11388:HG3_PB_assemblyticsfalcon_3592:HG4_Ill_250bpfermikitraw_15679:HG4_Ill_GATKHCSBGrefine_8190:HG4_Ill_GATKHC_19016:HG4_Ill_scalpel_10895;NumExactMatchSVs=12;ClusterMaxShiftDist=0.118519;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.207407;PBcalls=6;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=65;DistBack=462;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=346;REFWIDENED=10:134581174-134581519;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=754.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:37:1/1:4:21:1:17:./.:1:6:1:5:./.:0:8:./.:.:.:.:.:.
chr10	134617662	HG2_Ill_GATKHC_19019	G	GTCCCCTCGGCCCTGTCCCCACGGCCCTGTCCCCACGTCCCTGTCCCCTCGGCCCCA	20	PASS	ClusterIDs=HG2_Ill_GATKHC_19019:HG2_PB_HySA_21453:HG4_Ill_GATKHC_19021;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_GATKHC_19019:HG4_Ill_GATKHC_19021;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0917431;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.110092;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=-52;DistForward=16;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=33;REFWIDENED=10:134617661-134617696;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=755.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:1|0:3:32:26:1:./.:6:1:1:4:0/1:8:5:./.:.:.:.:.:.
chr10	134678126	HG2_PB_HySA_21464	T	TTGCAACACACCTGTCCCCCTGCCTGAGACCTGCACACACCTGTCCCCAATGCCCGAGACCTGCACACACCTGTCCCCCGCCTGAGACCTGCACACACCTGTCCCCAGTGCCCGAGACCTGCACACACCTGTCCCCCACCTGAGACCTGCACACACCTGTCCCCAGTGCCCGAGACC	10	PASS	ClusterIDs=HG2_PB_HySA_21464:HG4_PB_pbsv_11823:HG2_PB_PB10Xdip_3254:HG3_PB_pbsv_11532:HG2_PB_pbsv_11832;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_21464;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0394366;ClusterMaxSizeDiff=0.028169;ClusterMaxEditDist=0.206704;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=176;DistBack=1116;DistForward=9664;DistMin=1116;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1500;REFWIDENED=10:134677010-134678509;PctSeqSimilarity=0.9972;PctSizeSimilarity=0.9943;PctRecOverlap=0.9887;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=756.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:./.:0:7:0:4:./.:10:12:3:6:./.:0:0:./.:.:.:.:.:.
chr10	134687791	HG2_PB_SVrefine2Falcon2Bionano_5718	G	GCTGCCCTATTGTGATAATCATTAGAAAGAATCAAGGTAATTAATTCAAGGAATGAAGGAGGAAAACATCATCTGCATAGATGGAGAAAAATATACAAGCATTCATGACTAAAATTATTAGCGAATAGAAATAAACTTCCTTAATCAATAAAGATCGATAAAAACCTACAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_3255:HG2_PB_pbsv_11833:HG4_PB_SVrefine2Falcon1Dovetail_7187:HG3_PB_pbsv_11533:HG3_PB_SVrefine2PBcRDovetail_5531:HG3_Ill_SVrefine2DISCOVARDovetail_8690:HG2_PB_SVrefine2PBcRplusDovetail_1512:HG2_PB_SVrefine2PB10Xhap12_8541:HG2_PB_SVrefine2Falcon2Bionano_5718:HG2_PB_SVrefine2Falcon1plusDovetail_1598:HG2_Ill_SVrefine2DISCOVARplusDovetail_1812;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1812:HG2_PB_SVrefine2Falcon1plusDovetail_1598:HG2_PB_SVrefine2Falcon2Bionano_5718:HG2_PB_SVrefine2PB10Xhap12_8541:HG2_PB_SVrefine2PBcRplusDovetail_1512:HG3_Ill_SVrefine2DISCOVARDovetail_8690:HG3_PB_SVrefine2PBcRDovetail_5531;NumExactMatchSVs=7;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.252055;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=170;DistBack=9664;DistForward=6342;DistMin=6342;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=511;REFWIDENED=10:134687792-134688302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:41:1/1:2:16:0:13:./.:1:2:0:2:0/1:6:9:./.:.:.:.:.:.
chr10	134749328	HG4_PB_HySA_17230	C	CCCTCAGCACCCAAACACACTGAGATCTCCTCACTCCCCTCACATCCAAACACACTGTGATCTCCTCACT	10	PASS	ClusterIDs=HG4_PB_pbsv_11828:HG4_PB_HySA_17230:HG2_PB_pbsv_11840:HG2_PB_HySA_21484;NumClusterSVs=4;ExactMatchIDs=HG4_PB_HySA_17230;NumExactMatchSVs=1;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.263158;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=69;DistBack=48;DistForward=6531;DistMin=48;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1378;REFWIDENED=10:134748742-134750119;PctSeqSimilarity=0.9916;PctSizeSimilarity=0.9718;PctRecOverlap=0.3099;SizeDiff=-2;StartDistance=48;EndDistance=48;GTMatch=0;TruScore=75;MatchId=758.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:31:./.:11:6:1:22:./.:4:2:3:2:./.:0:0:./.:.:.:.:.:.
chr10	134874934	HG2_PB_SVrefine2PB10Xhap12_8552	C	CCTGAATCCGAGGCCTCCACCGTGACCCTCGCCTCCACCCGGGTGCCGGCTGCAGAGACGGGGTTTCCTG	20	PASS	ClusterIDs=HG4_PB_HySA_17251:HG4_PB_pbsv_11842:HG3_PB_HySA_17872:HG3_PB_pbsv_11554:HG2_PB_HySA_21509:HG2_PB_pbsv_11856:HG4_PB_SVrefine2PBcRDovetail_5952:HG4_PB_SVrefine2Falcon1Dovetail_7199:HG3_Ill_Krunchall_15869:HG3_Ill_GATKHC_18928:HG3_Ill_250bpfermikitraw_15402:HG2_Ill_Krunchall_16182:HG2_Ill_GATKHCSBGrefine_7997:HG4_Ill_Krunchall_16441:HG4_Ill_GATKHC_19043:HG4_Ill_250bpfermikitraw_15697:HG2_PB_SVrefine2PBcRplusDovetail_1523:HG2_PB_SVrefine2PB10Xhap12_8552:HG2_PB_SVrefine2Falcon2Bionano_5729:HG2_PB_SVrefine2Falcon1plusDovetail_1608:HG2_Ill_SVrefine2DISCOVARplusDovetail_1817:HG2_Ill_GATKHC_19042:HG2_Ill_250bpfermikitraw_15843:HG2_PB_PB10Xdip_3270;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15843:HG2_Ill_GATKHC_19042:HG2_Ill_SVrefine2DISCOVARplusDovetail_1817:HG2_PB_SVrefine2Falcon1plusDovetail_1608:HG2_PB_SVrefine2Falcon2Bionano_5729:HG2_PB_SVrefine2PB10Xhap12_8552:HG2_PB_SVrefine2PBcRplusDovetail_1523:HG4_Ill_250bpfermikitraw_15697:HG4_Ill_GATKHC_19043:HG4_Ill_Krunchall_16441;NumExactMatchSVs=10;ClusterMaxShiftDist=0.151724;ClusterMaxSizeDiff=0.124138;ClusterMaxEditDist=0.293333;PBcalls=13;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=-68;DistForward=-1;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=74;REFWIDENED=10:134874935-134875008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=762.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:33:./.:6:19:6:15:./.:1:8:0:8:1/1:1:38:./.:.:.:.:.:.
chr10	134941336	HG4_PB_HySA_17253	C	CCCCAGCGCCACCTCCGCCTGGCCCCGCCCACCCAGCTCCACCTCCGCCTGGCCCCGCCCACCCAGCGCCACCTCCGCCTGGCCCCGCCCACCCAGCTCCACCTCCGCCTGGCCCGCCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5730:HG4_PB_HySA_17253:HG4_PB_SVrefine2PBcRDovetail_5953:HG4_PB_pbsv_11846:HG2_PB_pbsv_11864;NumClusterSVs=5;ExactMatchIDs=HG4_PB_HySA_17253;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0920502;ClusterMaxSizeDiff=0.0920502;ClusterMaxEditDist=0.320988;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=119;DistBack=4;DistForward=5;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=191;REFWIDENED=10:134941256-134941446;PctSeqSimilarity=0.9801;PctSizeSimilarity=0.9917;PctRecOverlap=0.3223;SizeDiff=-1;StartDistance=81;EndDistance=81;GTMatch=0;TruScore=76;MatchId=764.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:18:./.:20:4:8:14:./.:3:1:2:1:./.:4:0:./.:.:.:.:.:.
chr10	135057063	HG3_PB_assemblyticsfalcon_3659	G	GCTTCCTGCTCACCCTCCTTTCCCTCTGAGCTGCCCAGCTGCATGGGGCCGAGGGCTATGCCGGCTC	20	PASS	ClusterIDs=HG3_PB_HySA_17907:HG4_PB_pbsv_11865:HG2_PB_PB10Xdip_3300:HG3_PB_pbsv_11577:HG2_PB_HySA_21575:HG4_Ill_scalpel_10910:HG4_Ill_manta_2823:HG4_Ill_Krunchall_16449:HG4_Ill_GATKHC_19059:HG4_Ill_GATKHCSBGrefine_8205:HG4_Ill_250bpfermikitraw_15715:HG4_Ill_150bpfermikitraw_15090:HG3_PB_assemblyticsfalcon_3659:HG3_PB_SVrefine2PBcRDovetail_5544:HG3_Ill_scalpel_11420:HG3_Ill_SVrefine2DISCOVARDovetail_8701:HG3_Ill_Krunchall_15883:HG3_Ill_GATKHC_18948:HG3_Ill_GATKHCSBGrefine_7887:HG3_Ill_250bpfermikitraw_15418:HG2_Ill_scalpel_11231:HG2_Ill_Krunchall_16194:HG2_Ill_GATKHC_19064:HG2_Ill_GATKHCSBGrefine_8010:HG2_Ill_250bpfermikitraw_15857:HG2_Ill_150bpfermikitraw_14945;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14945:HG2_Ill_250bpfermikitraw_15857:HG2_Ill_GATKHCSBGrefine_8010:HG2_Ill_GATKHC_19064:HG2_Ill_Krunchall_16194:HG2_Ill_scalpel_11231:HG3_Ill_250bpfermikitraw_15418:HG3_Ill_GATKHCSBGrefine_7887:HG3_Ill_GATKHC_18948:HG3_Ill_Krunchall_15883:HG3_Ill_SVrefine2DISCOVARDovetail_8701:HG3_Ill_scalpel_11420:HG3_PB_SVrefine2PBcRDovetail_5544:HG3_PB_assemblyticsfalcon_3659:HG4_Ill_150bpfermikitraw_15090:HG4_Ill_250bpfermikitraw_15715:HG4_Ill_GATKHCSBGrefine_8205:HG4_Ill_GATKHC_19059:HG4_Ill_Krunchall_16449:HG4_Ill_manta_2823:HG4_Ill_scalpel_10910;NumExactMatchSVs=21;ClusterMaxShiftDist=0.10219;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.275362;PBcalls=7;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=71;REFWIDENED=10:135057064-135057134;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=766.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:./.:0:2:1:21:./.:2:3:1:10:1/1:1:49:./.:.:.:.:.:.
chr10	135229478	HG4_Ill_GATKHCSBGrefine_8212	G	GGCGGGTGTCGGGCAGGCGGGTGTCGGGCAGGCGGGTGTCGGGCAGGCGGGTGTCGGCAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1827:HG4_Ill_svaba_14868:HG4_Ill_GATKHC_19068:HG4_Ill_GATKHCSBGrefine_8212:HG3_Ill_svaba_14986:HG2_Ill_svaba_14819:HG2_Ill_GATKHC_19074:HG2_PB_SVrefine2Falcon2Bionano_5743;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_19074:HG2_Ill_svaba_14819:HG3_Ill_svaba_14986:HG4_Ill_GATKHCSBGrefine_8212:HG4_Ill_GATKHC_19068:HG4_Ill_svaba_14868;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0165289;ClusterMaxSizeDiff=0.0165289;ClusterMaxEditDist=0.0495868;PBcalls=1;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=-1;DistForward=9;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=107;REFWIDENED=10:135229459-135229565;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=768.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:2:10:2:17:1/1:0:14:1:20:1/1:0:15:./.:.:.:.:.:.
chr11	220681	HG2_PB_SVrefine2PBcRplusDovetail_1550	T	TGGAAGGCAAGTTCTCAATATTTATCAGCATTTACCCTTCAGGAGTTCTTGCATGGGTAGATAAGGATGATACACAGGGATATTCACCACAGCATTTACCCTTCAGGAGTACTTGCATGGGTAGATAAGGATGACACACAGGGATATTCACCGGAAGGCAAGTTCTCAGTATTTATCAGCATTTACCCTTCCAGAGTACTTGCATGGGTAGATAAGGATGATACACAGGGATATTCACTACAGCATTTACCCTTCAGGAGTACTTGCATGGGTAGATAAGGATGACACACAGGGATATTCACCGGAAGGCAAGTTCTCAGTATTTATCAGCATTTACCCTTCCAGAGTACTTGCATGGGTAGATAAGGATGATACACAGGGATATTCACCACAGCATTTACCCTTCAGGAGTACTTGCATGGGTAGATAAGGATGACACACAGGGATATTCACCGGAAGGCAAGTTCTCAGTATTTATCAGCATTTACCCTTCCAGAGTACTTGCATGGGTAGATAAGGATGATACACAGGGATATTCACTACAGCATTTACCCTTCAGGAGTACTTGCATGGGTAGATAAGGATGACACACAGGGATATTCACC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1630:HG3_PB_pbsv_11600:HG2_PB_pbsv_11907:HG4_PB_HySA_17297:HG4_PB_pbsv_11886:HG2_PB_PB10Xdip_5305:HG2_PB_PB10Xdip_5304:HG3_PB_SVrefine2Falcon1Dovetail_7201:HG3_PB_SVrefine2PBcRDovetail_5559:HG2_PB_SVrefine2PBcRplusDovetail_1550:HG2_PB_SVrefine2PB10Xhap12_8582:HG2_PB_SVrefine2Falcon2Bionano_5751;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1630:HG3_PB_SVrefine2PBcRDovetail_5559:HG2_PB_SVrefine2PBcRplusDovetail_1550:HG2_PB_SVrefine2PB10Xhap12_8582:HG2_PB_SVrefine2Falcon2Bionano_5751;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0885668;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.278599;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=604;DistBack=13299;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=452;REFWIDENED=11:220682-221133;PctSeqSimilarity=0.997;PctSizeSimilarity=1;PctRecOverlap=0.6066;SizeDiff=0;StartDistance=-238;EndDistance=-238;GTMatch=0;TruScore=86;MatchId=769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:82:./.:0:0:0:1:./.:0:0:0:0:./.:0:3:0/1:5:12:.:.:.
chr11	388709	HG2_PB_SVrefine2Falcon1plusDovetail_1640	A	ACAGGAGGGTTTCCAGACAGTGCAGGGAGGAGGGTCCTTCATGAGGGTTTCCACACAGTGCAGGGAGGAGGGTCCTTCAGGAGGGTTTCCACACAGTGCAGGGAGGAGGGTCCTTCAGGAGGGTTTCCACACAGTGCAGGGAGGAGGGTCCTTCAGGAGGCTTTCCAGACAGTCCTGGGAGGAGGGTCCTTCAGGAGGGTTTCCACACAGTGCAGGGAGGAGGGTCCTTCAGGAGGGTTTCCAGACAGTGCAGGGAGGAGGGTCCTTCAGGAGGGTTTCCACACAGTGCAGGGAGGAGGGTCCTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1640:HG2_PB_pbsv_11925:HG3_PB_pbsv_11615:HG2_PB_PB10Xdip_5318:HG2_PB_PB10Xdip_5317:HG2_PB_HySA_21643:HG4_PB_pbsv_11904:HG2_PB_SVrefine2Falcon2Bionano_5759:HG3_PB_HySA_17955:HG2_PB_SVrefine2PBcRplusDovetail_1562:HG2_PB_SVrefine2PB10Xhap12_8592;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1640:HG2_PB_SVrefine2PBcRplusDovetail_1562:HG2_PB_SVrefine2PB10Xhap12_8592;NumExactMatchSVs=3;ClusterMaxShiftDist=0.161512;ClusterMaxSizeDiff=0.157534;ClusterMaxEditDist=0.24055;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=304;DistBack=3001;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=261;REFWIDENED=11:388710-388970;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9934;PctRecOverlap=0.3508;SizeDiff=2;StartDistance=-197;EndDistance=-197;GTMatch=0;TruScore=77;MatchId=770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:./.:0:0:0:10:./.:0:3:0:3:1/1:0:8:1/1:0:15:.:.:.
chr11	473543	HG2_PB_SVrefine2Falcon2Bionano_5768	G	GGGCTGCAAATGTGAGGGCGAATGTTGGGTGCAGGGTGGTGGAGGTAGCTGGGCCTTCCCTGCCGCGGAGGAGGCAAATGTGAGCGCGAATGTCCAGCCCAGGGTGGTGGAGGTAGCTGGGCCTTCCCTGCCGCGGA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1836:HG2_PB_pbsv_11938:HG4_PB_SVrefine2Falcon1Dovetail_7252:HG4_PB_pbsv_11917:HG4_PB_SVrefine2PBcRDovetail_5978:HG4_Ill_SVrefine2DISCOVARDovetail_8474:HG2_PB_SVrefine2Falcon2Bionano_5768:HG2_PB_SVrefine2Falcon1plusDovetail_1650;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1836:HG4_PB_SVrefine2PBcRDovetail_5978:HG4_Ill_SVrefine2DISCOVARDovetail_8474:HG2_PB_SVrefine2Falcon2Bionano_5768:HG2_PB_SVrefine2Falcon1plusDovetail_1650;NumExactMatchSVs=5;ClusterMaxShiftDist=0.077193;ClusterMaxSizeDiff=0.077193;ClusterMaxEditDist=0.241379;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=136;DistBack=1524;DistForward=164;DistMin=164;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=205;REFWIDENED=11:473544-473748;PctSeqSimilarity=0.9871;PctSizeSimilarity=1;PctRecOverlap=0.3066;SizeDiff=0;StartDistance=-95;EndDistance=-95;GTMatch=0;TruScore=76;MatchId=774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:16:0|1:21:3:2:9:./.:1:2:2:0:0/1:32:5:./.:.:.:.:.:.
chr11	640099	HG2_PB_SVrefine2PB10Xhap12_8614	A	GGCCTCCCCCCGGACCCCTGCGGCCCCGACTGTGCGCCCCCCGCGCCCGGCCTCCCCCAGGACCCCTGCGGCCCCGACTGTGCGCCCCCCGCGCCCGGCCTTCCCCGGGTCCCTGCGGCCCCGACTGTGCGCCCCCGCGCCCG	10	PASS	ClusterIDs=HG2_PB_pbsv_11948:HG2_PB_SVrefine2Falcon2Bionano_5778:HG2_PB_SVrefine2PB10Xhap12_8615:HG2_PB_SVrefine2PB10Xhap12_8614:HG2_PB_SVrefine2PBcRplusDovetail_1575;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8614;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0422535;ClusterMaxSizeDiff=0.0210526;ClusterMaxEditDist=0.204225;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=142;DistBack=-1;DistForward=52;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=206;REFWIDENED=11:639989-640194;PctSeqSimilarity=0.9902;PctSizeSimilarity=0.9861;PctRecOverlap=0.931;SizeDiff=-2;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=96;MatchId=775.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:30:./.:9:10:14:15:./.:5:9:6:0:0/0:26:2:./.:.:.:.:2978:.
chr11	696767	HG2_Ill_SVrefine2DISCOVARplusDovetail_1843	C	CAAAAATTAAAAATTAGCCCGGGGAGCTACGTGGGAGGCTGACGCTGGTGGATCACTTGAGCCCAAGAGGCTGCAGTGAAGCCGTGATCAGGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACCCCCTTCTACA	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_8484:HG2_PB_SVrefine2Falcon1plusDovetail_1664:HG2_PB_PB10Xdip_5610:HG4_PB_pbsv_11935:HG2_PB_PB10Xdip_5609:HG3_PB_SVrefine2PBcRDovetail_5579:HG2_PB_SVrefine2Falcon2Bionano_5783:HG3_PB_SVrefine2Falcon1Dovetail_7228:HG3_Ill_manta_2720:HG3_Ill_SVrefine2DISCOVARDovetail_8718:HG3_Ill_MetaSV_713:HG3_Ill_250bpfermikitraw_15460:HG3_Ill_150bpfermikitraw_14987:HG2_PB_SVrefine2PBcRplusDovetail_1579:HG2_PB_SVrefine2PB10Xhap12_8621:HG2_Ill_manta_3335:HG2_Ill_SVrefine2DISCOVARplusDovetail_1843:HG2_Ill_MetaSV_725:HG2_10X_SVrefine210Xhap12_8351:HG3_PB_pbsv_11637:HG2_PB_HySA_21680:HG2_PB_pbsv_11953:HG3_PB_HySA_17972:HG4_Ill_GATKHCSBGrefine_8232:HG3_Ill_GATKHCSBGrefine_7911:HG2_Ill_GATKHCSBGrefine_8031:HG4_PB_HySA_17340:HG4_Ill_MetaSV_751:HG4_PB_SVrefine2PBcRDovetail_5989:HG4_PB_SVrefine2Falcon1Dovetail_7267;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8351:HG2_Ill_MetaSV_725:HG2_Ill_SVrefine2DISCOVARplusDovetail_1843:HG2_Ill_manta_3335:HG2_PB_SVrefine2PB10Xhap12_8621:HG2_PB_SVrefine2PBcRplusDovetail_1579:HG3_Ill_150bpfermikitraw_14987:HG3_Ill_250bpfermikitraw_15460:HG3_Ill_MetaSV_713:HG3_Ill_SVrefine2DISCOVARDovetail_8718:HG3_Ill_manta_2720:HG3_PB_SVrefine2Falcon1Dovetail_7228;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0989399;ClusterMaxSizeDiff=0.0851064;ClusterMaxEditDist=0.236111;PBcalls=16;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=136;DistBack=-29;DistForward=-1;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=121;REFWIDENED=11:696660-696780;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.9926;PctRecOverlap=0.6642;SizeDiff=1;StartDistance=45;EndDistance=45;GTMatch=0;TruScore=88;MatchId=776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:28:1/1:0:13:4:19:1/1:0:23:0:24:1/1:0:21:./.:.:.:.:.:.
chr11	877783	HG2_Ill_GATKHC_19130	G	GCACTGTGGGGAGGCGGGGCCTTTAGAAGGCGGCACTGTGGGGAGGCGGGGCCTTTAGAAGGCGA	20	PASS	ClusterIDs=HG2_PB_HySA_21689:HG2_Ill_GATKHC_19130:HG2_PB_pbsv_11960:HG4_PB_pbsv_11939;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHC_19130;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.283465;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=-1;DistForward=28;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=31;REFWIDENED=11:877782-877815;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=777.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:35:./.:18:6:3:24:./.:3:2:3:0:0/1:7:3:./.:.:.:.:.:.
chr11	879497	HG2_Ill_GATKHCSBGrefine_8034	G	GGGAGAAGGCAGTATTGACCAGCCAAGGAGAGAGGCCCTGGGAGAGGACACACACAGGTGCACACAGGACCTTGTGAGGACACAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8357:HG2_PB_pbsv_11961:HG2_PB_HySA_21690:HG4_PB_HySA_17346:HG4_Ill_svaba_14916:HG4_Ill_manta_2830:HG4_Ill_Krunchall_16489:HG4_Ill_GATKHC_19119:HG4_Ill_GATKHCSBGrefine_8233:HG4_Ill_Cortex_509:HG4_Ill_250bpfermikitraw_15757:HG4_Ill_150bpfermikitraw_15123:HG3_Ill_svaba_15033:HG3_Ill_manta_2721:HG3_Ill_Spiral_12430:HG3_Ill_Krunchall_15919:HG3_Ill_GATKHC_19008:HG3_Ill_GATKHCSBGrefine_7916:HG3_Ill_Cortex_531:HG3_Ill_250bpfermikitraw_15467:HG3_Ill_150bpfermikitraw_14994:HG2_Ill_svaba_14867:HG2_Ill_manta_3336:HG2_Ill_SpiralSDKrefine_2365:HG2_Ill_Krunchall_16228:HG2_Ill_GATKHC_19131:HG2_Ill_GATKHCSBGrefine_8034:HG2_Ill_Cortex_1179:HG2_Ill_250bpfermikitraw_15901:HG2_Ill_150bpfermikitraw_14979:HG2_Ill_breakscan11_4242:HG4_PB_pbsv_11940:HG3_PB_HySA_17979:HG2_Ill_SVrefine2DISCOVARplusDovetail_1848;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14979:HG2_Ill_250bpfermikitraw_15901:HG2_Ill_Cortex_1179:HG2_Ill_GATKHCSBGrefine_8034:HG2_Ill_GATKHC_19131:HG2_Ill_Krunchall_16228:HG2_Ill_SpiralSDKrefine_2365:HG2_Ill_manta_3336:HG2_Ill_svaba_14867:HG3_Ill_150bpfermikitraw_14994:HG3_Ill_250bpfermikitraw_15467:HG3_Ill_Cortex_531:HG3_Ill_GATKHCSBGrefine_7916:HG3_Ill_GATKHC_19008:HG3_Ill_Krunchall_15919:HG3_Ill_Spiral_12430:HG3_Ill_manta_2721:HG3_Ill_svaba_15033:HG4_Ill_150bpfermikitraw_15123:HG4_Ill_250bpfermikitraw_15757:HG4_Ill_Cortex_509:HG4_Ill_GATKHCSBGrefine_8233:HG4_Ill_GATKHC_19119:HG4_Ill_Krunchall_16489:HG4_Ill_manta_2830:HG4_Ill_svaba_14916;NumExactMatchSVs=26;ClusterMaxShiftDist=0.13253;ClusterMaxSizeDiff=0.120482;ClusterMaxEditDist=0.253012;PBcalls=5;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=84;DistBack=-1;DistForward=4;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=75;REFWIDENED=11:879464-879538;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=778.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:./.:15:6:7:19:./.:2:26:20:0:0/1:28:27:./.:.:.:.:.:.
chr11	975203	HG2_PB_SVrefine2Falcon1plusDovetail_1669	C	CAGAGTAGCCGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACATTAGCGAGTAGCTGTAGGGTCCTCGGTATCCCTCGTGTGAGCCGACATCGGAGAGTAGCAGTGGGGTCCTCGGTCTCCCTCGTGTGAGCTGACGTCGGAGAGTAGTGGTGGGGTCCTCGGTCTCCCTCTTACGAGCCGACATTAGTGAGTAGCAGTGGGGTCCTCGGTCTCCCTTGTGTGAGCCGACGTCGGAGAGCAGCGGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACATCGGAGAGTAGTGGTGGGGTCCTCGGTCTCCCTCTTACGAGCCGACATTAGTGAGTAGCAGTGGGGTCCTCGGTCTCTCTTGTGTGAGCTGACATCGGAGAGTAGCAGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACATCGGAGAGTAGCGGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACATCGGAGAGTAGTGGTGGGTCCTCGGTCTCCCTCTTACGAGCCGACATTAGTGAGTAGCAGTGGGGTCCTCGGTCTCCCTTGTGTGAGCCGACGTCGGAGAGCAGCGGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACATCGGAGAGTAGTGGTGGGGTCCTCGGTCTCCCTCTTACGAGCCGACATTAGTGAGTAGCAGTGGGGTCCTCGGTCTCTCTTGTGTGAGCTGACATCGGAGAGTAGCAGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACATCGGAGAGTAGCGGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACATCGGAGAGTAGTGGTGGGGTCCTCGGTCTCCCTCTTACGAGCCGACATTAGTGAGTAGCAGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACGTCGGAGAGTAGCGGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACGTCGGAGAGTAGCGGTGGGGTCCTCGGTCTCCCTCGTGTGAGCCGACGTCGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1584:HG2_Ill_breakscan11_4243:HG4_PB_SVrefine2Falcon1Dovetail_7275:HG3_PB_pbsv_11648:HG3_PB_SVrefine2Falcon1Dovetail_7234:HG2_PB_pbsv_11966:HG2_PB_SVrefine2Falcon2Bionano_5791:HG2_PB_SVrefine2Falcon1plusDovetail_1669;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1669:HG2_PB_SVrefine2Falcon2Bionano_5791;NumExactMatchSVs=2;ClusterMaxShiftDist=0.184367;ClusterMaxSizeDiff=0.182014;ClusterMaxEditDist=0.3296;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=986;DistBack=9899;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=698;REFWIDENED=11:975204-975901;PctSeqSimilarity=0.9876;PctSizeSimilarity=0.999;PctRecOverlap=0.6575;SizeDiff=-1;StartDistance=-338;EndDistance=-338;GTMatch=0;TruScore=88;MatchId=780.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:25:0|1:34:2:0:28:./.:1:0:0:2:./.:3:1:0/1:21:16:.:14770:.
chr11	995694	HG2_PB_SVrefine2Falcon1plusDovetail_1671	A	ATCCAGGCTGAGCCTGACATCTTGCCCAGTGGCTTCTCCTCCCCTCCTCCCTCTCTTCCCCCTCTCCGTCCTCCCTCCCTCTCTTCATCCTCCCTCCTCCCCCTCCTCTTCCCTCCTCCCCTTCTCCCTCCCTTCTCCCCCTTCTCCCTCCCCCCCCCGCTTCCTTCCCTCCCCATCCTCCTCCCCTCTCCCCCTCTTACTCCTCCTCCCTCCTCTTCCTCTTCCCCCTCCTCCCCTCCTCTTCCTCTTCCCCTCCCTCCTCCCTTCCTCCTCCCCTCCTCCTCCTTCCCCTCCTCTCCCTCCTCCCCTCTACACCCCCTCCTCCCCTCCTTTCCCCTTCTCCCCCTCCTTTCCCCTTCTCCCCTTCCTTCCCCCCTCCTCTCCCCCTCCCCCTCCTTTCCCACCTCATCGTCCTCCCCCCCCTCCTCCCTCTTTCTTCTCCTTCCCTCTCTCCTCTCCTCCCCCTCCAACCCCTCCTCCCTTCCTCTCCTCCCTCTCCTTCCCCTTCCTCTCCCTCTCCTTCCCCTTCCTCTTCTCCCTCTTCTCCTCCCACTCTCCCTCCTCCTTCTCCCCTTCCTCCTTCCCCCTCCCCTCCTCCCTTCCTCCTTCCCCCTCCCTCCTCCCCTTCCCCTCCTCCTCCTCTCCTCCTCCCCCTCTCCTCCTCCCTCTCCTCCTCCCCCTCTCCCTCCTCCTCCTCTCCTCCTCCCCTCCCTCCTCCTCCCTCCCTCCCCTCCTCCTCCTCCCCTTCCTCCTTCCCCCCCCCTCCTCCTTCCCCCTCCCCCTTCTCTCTCCTCCTCCCGCTCTCCTCCTTCCTCTCCTCTTCCCCCTCCCCTCCTCCCTCTCCTCCTCCTCTCTTCTCCCTCCCTTCCCTCCCTCTTCCTCTCCTTCCCCTCCTCTCCTCCCTCTCCTCCTCTGCTCCTCCTCTCCCCCTCCTCCCTCTCCTCTCCTTCCTCCTCCTCTCCCTCCTCCTCCCCCTCCTCCCCTTCCTTCTCCTCCCTCTCCTCCCCCTCCTCCCCTTCTCTTCCTCCTTTCCCTCCTCTTCCTCCTCCCCTTTCTCTCCTCTTCCTCCTCCTCCCCCCCCCCTCCCTTTCCTCCCCTCCCTCCTCCTCCTCTTCTCCTCCTCCCCCCTCTCCTCCTCTCTCTCCTCTCTTCCTCCTCCTTTCCCTCCTCTTCCTCCTCCTTTCCTCCTACTCCTCTCCTCCTCCCTTCTCTTCCTCCCCTTCCTCCTCCCCCTCCTCCTCCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5793:HG4_PB_pbsv_11948:HG3_PB_pbsv_11651:HG2_PB_PB10Xdip_5632:HG2_PB_pbsv_11968:HG2_PB_PB10Xdip_5633:HG2_PB_HySA_21695:HG3_PB_HySA_17982:HG2_PB_SVrefine2Falcon1plusDovetail_1671:HG4_PB_SVrefine2PBcRDovetail_5993:HG4_PB_SVrefine2Falcon1Dovetail_7277:HG3_PB_SVrefine2Falcon1Dovetail_7236:HG3_PB_SVrefine2PBcRDovetail_5584:HG2_PB_SVrefine2PBcRplusDovetail_1586:HG2_PB_SVrefine2PB10Xhap12_8630;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1671;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0509604;ClusterMaxSizeDiff=0.0493924;ClusterMaxEditDist=0.210405;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1243;DistBack=15188;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=11:995695-995715;PctSeqSimilarity=0.9654;PctSizeSimilarity=0.9431;PctRecOverlap=0.9424;SizeDiff=-75;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=95;MatchId=781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:41:1/1:0:14:0:18:1/1:0:6:0:14:1/1:0:16:0/1:13:61:.:14770:.
chr11	1148460	HG2_PB_SVrefine2PB10Xhap12_8640	C	CACCCACTCACTCACTCACCCACTCACTTATTCACTCACTCACCCACTCACTTATTCACCCATTCACCCATTCACTCACCCATTCACTCACTCACTTATTCACTCACTCTCTCACTCATTCATTAATTCGCCCATTCACTCACACTTTCACTCACTCACTTATTCACTCATACACTCATTCACTTATTTACTCACTCATTCACTCACTCATTAATTCACCCATTCACTCACTCACTTATTCACTCATAGACTCATACACTCACTCATTCACTCACGCATCCACTCATTCACTCACTCATTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7244:HG2_PB_pbsv_11975:HG2_PB_PB10Xdip_5693:HG4_PB_pbsv_11952:HG4_PB_SVrefine2PBcRDovetail_5999:HG2_PB_PB10Xdip_5694:HG2_PB_SVrefine2PB10Xhap12_8641:HG2_PB_SVrefine2PBcRplusDovetail_1593:HG2_PB_SVrefine2PB10Xhap12_8640:HG2_PB_SVrefine2Falcon2Bionano_5800:HG2_10X_SVrefine210Xhap12_8369;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8369:HG2_PB_SVrefine2Falcon2Bionano_5800:HG2_PB_SVrefine2PB10Xhap12_8640:HG2_PB_SVrefine2PBcRplusDovetail_1593;NumExactMatchSVs=4;ClusterMaxShiftDist=0.251309;ClusterMaxSizeDiff=0.240838;ClusterMaxEditDist=0.302703;PBcalls=10;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=300;DistBack=4447;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1664;REFWIDENED=11:1148461-1150124;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:30:./.:12:8:5:22:./.:0:99:7:5:0/1:10:17:./.:2:5:.:.:.
chr11	1308608	HG3_PB_SVrefine2PBcRDovetail_5594	A	AGCAGCTCCCTGCTGCAGCCTCCCCGCCCGCAGCCTCCCCGCCGCAGCCTCCCCGCCGCAGCCTCCCCGCCGCAGCCTCCCCGCCGCACCCTCCCCGCCGCAGCCTCCCCGCCGCAGCCTCCCGCCGCACCCTCCCCGCCGCAGCCTCCCCGCCGCACCCTCCCCGCCGCAGCCTCCCCGCCGCAGCCTCCCCGCCGCAGCCTCCCCCCGCCGGCAGCCTCCCCGCCGCAGCCTCCCCGCCGCACCCCTCCCCCGCCGCAGCCTCCCCGCCGCAGCCTCCCCGCCGCAGCCTCCCCGGCCCGCAGCCTCCCCGCCGCACCCTCCCCGCCGGCAGCCTCCCCGCCGCACCCTCCCCGCCGCACCCTCCCCGCCGCAGCCTCCCCGCCGCACCCTCCCGCCGCAGCCTCCCCGCCGCACCCTCCCCGCCGCAGCCTCCCCGCCGCACCCTCCCCGCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7248:HG3_PB_SVrefine2PBcRDovetail_5594:HG2_PB_SVrefine2Falcon1plusDovetail_1680:HG2_PB_pbsv_11980;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_5594;NumExactMatchSVs=1;ClusterMaxShiftDist=0.177033;ClusterMaxSizeDiff=0.177033;ClusterMaxEditDist=0.237875;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=454;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=522;REFWIDENED=11:1308626-1309147;PctSeqSimilarity=0.9444;PctSizeSimilarity=0.8921;PctRecOverlap=0.7846;SizeDiff=49;StartDistance=-73;EndDistance=-73;GTMatch=0;TruScore=87;MatchId=783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:0|1:19:4:4:19:./.:5:0:1:0:./.:4:1:0/1:3:7:.:.:.
chr11	1362769	HG2_Ill_150bpfermikitraw_14988	A	AGTTTAGGGTGGGGTCTCTGCTGCATATGGAAACACACAGTGTGACCGCTGTCTGCAT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_5006:HG4_PB_HySA_17362:HG4_PB_assemblyticsfalcon_3684:HG2_PB_pbsv_11983:HG3_PB_pbsv_11667:HG3_PB_HySA_18000:HG2_PB_HySA_21707:HG4_PB_pbsv_11959:HG4_Ill_GATKHC_19127:HG4_Ill_GATKHCSBGrefine_8239:HG4_Ill_150bpfermikitraw_15129:HG3_PB_assemblyticsfalcon_3746:HG3_Ill_GATKHC_19018:HG3_Ill_GATKHCSBGrefine_7921:HG3_Ill_150bpfermikitraw_15004:HG2_PB_assemblyticsPBcR_3652:HG2_Ill_GATKHC_19146:HG2_Ill_GATKHCSBGrefine_8040:HG2_Ill_150bpfermikitraw_14988:HG2_PB_PB10Xdip_5007;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14988:HG2_Ill_GATKHCSBGrefine_8040:HG2_Ill_GATKHC_19146:HG2_PB_assemblyticsPBcR_3652:HG3_Ill_150bpfermikitraw_15004:HG3_Ill_GATKHCSBGrefine_7921:HG3_Ill_GATKHC_19018:HG3_PB_assemblyticsfalcon_3746:HG4_Ill_150bpfermikitraw_15129:HG4_Ill_GATKHCSBGrefine_8239:HG4_Ill_GATKHC_19127;NumExactMatchSVs=11;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.247934;PBcalls=11;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=57;DistBack=4702;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=863;REFWIDENED=11:1362580-1363442;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:34:1/1:1:10:2:17:./.:2:3:1:4:./.:1:2:./.:.:.:.:.:.
chr11	1426246	HG4_Ill_150bpfermikitraw_15133	T	TGGCTCTCTGAGGGGTGTGGGCCTCCATCTCTGGTGGTCTAGGGGGTTGTAGGGG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1858:HG2_PB_HySA_21711:HG3_PB_pbsv_11669:HG4_Ill_svaba_14928:HG3_Ill_svaba_15045:HG3_Ill_scalpel_11457:HG3_Ill_Krunchall_15928:HG3_Ill_GATKHC_19021:HG3_Ill_250bpfermikitraw_15476:HG2_Ill_svaba_14882:HG2_PB_PB10Xdip_5014:HG2_PB_PB10Xdip_5013:HG4_Ill_scalpel_10947:HG4_PB_pbsv_11962:HG4_Ill_Krunchall_16500:HG4_Ill_GATKHC_19131:HG4_Ill_GATKHCSBGrefine_8241:HG4_Ill_150bpfermikitraw_15133:HG3_Ill_scalpel_11456:HG3_Ill_GATKHC_19020:HG3_Ill_GATKHCSBGrefine_7922:HG3_Ill_250bpfermikitraw_15475:HG3_Ill_150bpfermikitraw_15006:HG2_Ill_scalpel_11271:HG2_Ill_Krunchall_16246:HG2_Ill_GATKHC_19150:HG2_Ill_GATKHCSBGrefine_8041:HG2_Ill_250bpfermikitraw_15908:HG2_Ill_150bpfermikitraw_14990:HG4_PB_assemblyticsfalcon_3690:HG3_PB_assemblyticsfalcon_3752:HG4_PB_HySA_17364:HG4_PB_SVrefine2PBcRDovetail_6006:HG4_Ill_SVrefine2DISCOVARDovetail_8496:HG3_PB_SVrefine2PBcRDovetail_5596:HG2_PB_SVrefine2PBcRplusDovetail_1599:HG2_PB_SVrefine2PB10Xhap12_8650:HG2_PB_SVrefine2Falcon2Bionano_5804:HG2_PB_SVrefine2Falcon1plusDovetail_1683;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14990:HG2_Ill_250bpfermikitraw_15908:HG2_Ill_GATKHCSBGrefine_8041:HG2_Ill_GATKHC_19150:HG2_Ill_Krunchall_16246:HG2_Ill_scalpel_11271:HG3_Ill_150bpfermikitraw_15006:HG3_Ill_250bpfermikitraw_15475:HG3_Ill_GATKHCSBGrefine_7922:HG3_Ill_GATKHC_19020:HG3_Ill_scalpel_11456:HG4_Ill_150bpfermikitraw_15133:HG4_Ill_GATKHCSBGrefine_8241:HG4_Ill_GATKHC_19131:HG4_Ill_Krunchall_16500:HG4_Ill_scalpel_10947;NumExactMatchSVs=16;ClusterMaxShiftDist=0.209524;ClusterMaxSizeDiff=0.171429;ClusterMaxEditDist=0.342857;PBcalls=14;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=8712;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=11:1426213-1426314;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:35:1/1:2:25:1:19:./.:1:1:0:7:0/1:3:15:./.:.:.:.:.:.
chr11	1439285	HG2_PB_PB10Xdip_5016	T	CTGCTTCTGTTGGCTGTTTCTTCTCTTGAGAGTGGGTCACACTGTGTCCTGCTTCTGTTGGCTGTTTCTTCTCTTGAGAGTGGGTCACACTGTGTCCTGCTTCTGTTGGCTGTTTCTTCTCTTGTGAGTGGGTCACCTGTGTCCTGCTTCTGTGGGCTGTTTCTTCTCTTGAGAGTGGGTCACACTGTGTCCTGCTTCTGTGGGCTGTTTCTTCTCTTGAGAGTGGGTCACCTGTGTCCTGCTTCTGTGGGCTGTTTCTTCTCTTGAGAGTGGGTCACACTGTGTCCTGCTTCTGTTGGCAGTTTCTTCTCTTGAGAGTGGTTCTCCTGTGTCCTGCTTCTGTTGGCTGTTTCTTCTCTGAGAGTGGGTCACCTGTGTCCTGCTTCTGTTGGCAGTTTCTTCTCTTGAGAGTGGTTCTCCTGTGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8652:HG2_PB_PB10Xdip_5016:HG2_PB_SVrefine2Falcon1plusDovetail_1685:HG2_PB_SVrefine2PBcRplusDovetail_1602;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_5016;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115299;ClusterMaxSizeDiff=0.115299;ClusterMaxEditDist=0.154535;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=424;DistBack=5;DistForward=202;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1191;REFWIDENED=11:1438706-1439896;PctSeqSimilarity=0.9632;PctSizeSimilarity=0.8926;PctRecOverlap=0.4379;SizeDiff=-51;StartDistance=242;EndDistance=242;GTMatch=0;TruScore=76;MatchId=786.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:39:./.:18:8:6:17:./.:2:1:11:4:0/0:9:0:0/1:10:4:.:.:.
chr11	1534197	HG3_PB_SVrefine2Falcon1Dovetail_7257	G	GGGGTGGGGCTGGAGGTGGGGCCTGGTGGGAGGTGATTAGGGGCTGGGAGGGGGCCTGGTGGGCGGTGATTAGGGGTGGGGCTGGGAGGTGGGGCCTGGTGGGGGTGATTAGGGGTGGGGCTGGGAGGTGGGGCCTGGTGGGCGGTGATTA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7257:HG2_PB_SVrefine2Falcon1plusDovetail_1689:HG3_PB_assemblyticsfalcon_3765:HG3_PB_pbsv_11675;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7257;NumExactMatchSVs=1;ClusterMaxShiftDist=0.083871;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.205128;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=150;DistBack=48;DistForward=40;DistMin=40;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=275;REFWIDENED=11:1533965-1534239;PctSeqSimilarity=0.9756;PctSizeSimilarity=0.9375;PctRecOverlap=0.6646;SizeDiff=-10;StartDistance=49;EndDistance=49;GTMatch=0;TruScore=85;MatchId=787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:9:0|1:20:1:1:9:./.:6:0:3:0:./.:5:0:./.:.:.:.:.:.
chr11	1558989	HG2_PB_PB10Xdip_5033	A	AGTGAAACCCCATCTCTACTAAAAACACAAAAATTACTGGGCTGGTGGCACGTGCCTGTAATACCAGCTACTTGAGAGACTGAGGCAGGAGAATCACTTGAACCCAGAAGGCGGAGGTTGTGGTGAGCCGAGAACATGCCACTGCACTCTGGCCTGAGCAACAGAGCGAGACTCCATCTCAAAAAAACAAAACAAAACAAAAACAAGAATCAGTCCCCCGGAAGCTAGTATTAGTTAATTTCTGAATATTCACAATGATGACAGCAAAATCCACAAAGCATAGACCTCAGTGAGTTTAAAAAGACCAACTGCTGGTCAGCTTCCAGGCACAAAGTACCTGCTACTTATGAATGTACACAGGTAATAATCACACATTCACAAAACGCACTCAGCTGCCTCCTTGGGAACCCGGCTGACTGTGCTGGTCCCGCTGACACGAATCCCTGTGGGTTCAACTCACCGGCTCAAGAGTCTACTTCCCACTCCGAGGCCTGGGTGCTTCCAATGCAGTCCCTCCCAGTAAATGCAGAAAGCAAGCAAGAGCCTATGATTCGGAATAAAGCAAACACAGCTGTGCGGCCTCAACTCTCAGTGTCCGTGGGTTTCAGAGGCCTTGCATGAAACACCTCTCCACACTAACAGTAGCCAACATTTACCACACGCCAAGCACTGGGCTAAGCCTTTACCTTGGTCTCTCCCTCCACAACCATGCACTGCAAGTCGTACAGTTTCCGCCTTAGGGGTGATTTTTTTAAAGCAGGTGATTTAAAGAAAGAGGTGAAGTGACCACTCACACAGCTAATAAGCGGCAGGGCTGGAACAGCAGTGTTGCCTCTTCAAGAAGCCATGAGCCGGCCGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGAAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGTTCAAGACCAACCTGGCCTTGAAACCCCATCTCCACTAAAAATACAAAAATTAGGCGGGCATGGTGGCGGAAGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGTAACTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGACGACACAGTGAAACTCTGTCTCAAAAAAAAAAAAAAAGACATGAGCCCTCCCACCCCATGGTTGGTCCCCCGAGCCATCTGTACAGCTGCCCTGACCCCTACACTCTGGCTCCAGGCCGATCCCCGCTGCACTGGGCACTTCTGCCGTCTCTTGATTCATCCCATTCTGCTTGTCTTCCCTGCTCTCCCCGTCACTGAAGTCCATGCAATGCGATGCCAAGAACGGTTCTAATTCCTCTCCTTGGTTATCCTGACAACAACCCCCCGACCCCGCGCCCCCACGCCGCCCTTCGACTCCCAAGGGCCTGAGAGACACTGAAACAAAATGTCCATCAAGCCTTTCACTCCACTTTCTGAACTTCGGTGTCTACACAAGTCCTTCCACCGGCCAAAACCAAGAGCAACGGCTCCCCACTCCCACCCCAGGCCCCTGGAATGAGTAAGCGGACTCTGGACAGGCGCTATAGGGGTAGCTACAGGGACAGGCAGAGATGCGCAAGGACCACGCTGTCGGGTGAAAATGCCTGTCCTTATTGCTCTTCCAAAGGAAAAAAGTTTTGTTTTTTTTTAAATCACTATAGCCAGAATAACTGCTGCGGGCAAAGCGGCGACGCTTTAGCTGCTATACCGCTTCTCCGGTTTCCAGCAAGCTAAACACAGAAGCGGATGGGAGGGGAAGGCGGCCGCGGCTCCCCAGCTAAGAGCCAGCAGTTTCTCCGGCTTCCTTCCTACTCCACCCTCCTGCCCCGGCCGCCCGCGGACCGCAGCAAGATCTGCACCTCGCCGGGACCCTCCGCGGGTCCGCAGCCCGCAACACCCAGTCCTGCTCCCCTCCTTGGCCACAGCCCCGCGAGTATCTCAGGAAACTGGGGTCTTTCACTTCTTTTTCCTTTTTCTTAAGGAACTTGTCTCTACCGGTGTTCAAGTTACTTAGTCCAGAAGCGAGCCCCGCGCAGGGAGCGGAGCGGGCAGGGAAAGCTGCGAGGCCCCGGCCCACCGACAGCCGGGCGCGCGGGGCGGCCGGGCCAGGCCTCTGACGGGACCAGAACCGGGCTGCCCCCGAGACGCCCGCCCCGGCCCGGCCCGCCCAGGACAGGCGCGTCTGCTCCGCCCGCTCCGCCCGGGCCCGATGCCCTTGAGCGGCGGTGCCCGCACGGAGCCCCGCAACTCACTCGCGCTCCGACCGCCCCGCCCGGCGCCCGCCCGGCGCCCGCCCGAGCCCGGCCCGGCCGCAGACTCACCCCATGAGCCAGTCCATGGCTGCGCGGGGCCGCCGCGCCCGCTGCCCGACGCGATCGGCCTCAGCCCCGGCGTCCGGAAGTAAACACTGGCCCGCCCGCTCGCTCCCACACGCGCCGCCCGCCGCCGCCGGAAGTGATGCGCCCGCGCGCCGCCTGCTGGGACGCGTAGTCCCGGCCTCGCACCCTGCGCTTCCTGGCCGCCAGGTGTTCCTGGCTCCACGGGCTGTCCCCGCGCACCTGAACTGTCTCCCCACACCCCGGCTGTAATTTCCCCCTTGGGCTCTCTCCGCGCTGTCCCCCACGCCCTGGACGGTTACCTTCCGCCTTTGGCGCTCCCCTTGCTCCAGGACTGTCCCTCATACCCTGGCTGCCCCCTCCCTCCCCGGCAGTCCGCCTGCGCCCCCGGCTGTCCTCTCCCACCTTTGGCCCTCTCCTCGCTCCCTGCGCCGTCCCCGCTCGGTGGGCTGTATATCGCCTCGCTCTTGGCTGTCTCTCCCCCATCCCAGACTCTCCCCTTGAGCCCCTGGGTGTCCCCATGTCCCCTGGGTGTCCCCATGTTCCCTGGGCATCTGACCTCCTAGCCACTTTGTCCTGGGCCCGGCCCACAGCAGTTACTCAGTGACTGCCTGTCACTGAGTGACAGGAATTCCCCATTCTTCCCCCGGGGAAGATGCTCGGAGGAGCACAGAATCAGGACAGGGAGAACGCAGAACCTGGGGGAGAGCGGGGAGGGACTGCTTCCCCCGGCTGAATACAGGGCGGCCGGCGGGGCTGACCCTGGAGGGGGCGAGGTCAGCTGGCCTGATGCGGTCACTTGTCTGAAGCCCAGTGGCTGTGTCACTCCACCATGCTTGTCAGACAAGTGACCGCATCAGGCCAGCTGACCTCGCCCCCTCCAGGGTCAGCCCCGCCTGCTGCCCTGTATTCAGCCGGGGAAAGCGGCCCCTCCCCGCTCTCCCCAGTCCCCTCCTGCCACCTGGCCTCTCTCCAGGCTCAAGAATGCTTAGGTATCAGGCAGGACTCTCAGTTACCATCAAGAGAAAGGCTTAAGGTGAAAAGGAATTCATAACAGATCCTGGGTAGCTCACGGCATTGCCGAGAAAGCTCGAGAACTTCTAAGACCATGCATCTGGGAACGCCTCCAGTCGCAGTGGCCTCCGTTCTTAGTCCCTTCTCTCTGGCTTTGCCCCACAGTTGAGACCAGCAGGCGAAACCTTTCAACCCCAGACCCCCCCGCCCCACCTCCCCGCAGCAGCAGGAGGCTGCGTGACGTGGTTATGGTCAATGGAGTCAGAACAGAAGTCGGCCAGGGAGGCTTCCCATCCGAATGAGAGAATGACGCCTCCGCAGGGAGGCGGTTTGACTTCTGTTTCTGCACGGGCAGAATACCTGGAGGGCGGGAACCAGGTATTCGGACTGCCTTGGTGGGAGGCATTGACAGAAAACAAGGACCGAGAAGACCGGAAGAGCTTGGGACGTAGATGACTCCAAAAAGCGGCTGCACCAGCCATGGGCTGCCCTTCTCCGGAGCTCTTGATGTGCGGGAAATGCAGACCCGGCACTGGAATTTCTGCTGGTCACAGCCAAGCCTCTTCCTGCCTGATGTGTGAGCACAGAACTGGGACAGTAAAGGCGTCACTGCTGCAACCACAGGGCGCCAGCCTCCCGCATCCCTGAGTGCTGGTGCTGGAGATGCCGCCTCCGCCGGCCAAGCGCTGCTGCTGCTGCTGCTGCTGCTGCTCGCATGGGCCGTGCATGCCGCTTTCCGTTCCAAGTTGGGCAGGTGCTGCTGACAGGGAAGCTGAGGGCGTCTGCCTGCACCGCCGTTGGCAGCTTCTCCAATGCAAGGCAGACCCGGCCTCCTAAGGAGGGGTTTCTCCAGGAAGTTAAGGTGCTTAGACGGTGAAGAACGAAACGGCCCACAACAGTCCTTCTATTTCGCTGCTTTGTACAAACACCGTTCTGCCCACACCTCACCTTACTGCCCTCATAGTGCAGCTGAGCCTTGTAGAGGTGAATCCCCACTCCCTCCAGGGCCCAGCCCGCAGCTTATCAGCAACCGCCAGGAGGCGGGGAGGCGTCCACTCTTGCTGCGTCGCTTTCCTGGTTGTAAAGCTCGTGGGTGAACATTGCAAACTTAACCAGCAAAAACCACCGGAGATAAAATAGGAAAGACAAAGGAAAGAGGAGGAACACGCATTTAACACACAGCATCTCGGGAAGGAAGAAAAGACAGACACATGTCACCAAGGTCTGACTGTTGAGTCAGAGGTTGCAGTGAGCGGAGACCGTGTCATTGCACTCTAGCCTGGGCAACAAGAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAGTGACAAGTGACAGAACTGCTTGTACTGCAGCCCCAGCTAAACCTTGTTCTCAATCTGGGGCACATTTAAAGCTTTTGCGCACTCTTGGGTCTCTTGCTAATTACTTAAGAGCAGCACATTCTGTAAGCACTGGTCAGAGAGGACAGGCTACCTTACTGGTGTGGCCAAGGCTGATGACTTCCTTCTCCCTGCTTCATGCTCACTTTGCTTTAACGAACCGCTCGCTCGGCTGGCTGCATCTCTTTACCTTGCAGAGTGACCCAACCCATCGTTCCTGAGGACAAGGAACCCTTGGTGGCCCTGACTGCTCCTAGGTGCTGGCCTCTTCCAGTAATGGCTCCCCTGAAAGTGGTTGTCCTAGGGGATGCTTCAGGCAGCCCCCCCAGGTTCCATCCACATTCCTTCCTGCCCCATTGGGTGCCAGCAATCCTGGCGACAGCCTGCCTGACTTGGACAGGTTGTTTAATGTCCCTGTGCCTCAGCTTCCTTTTAGTGGAATGGGAATGATATTAGCAAACTTGTTTTAAGAAATCCTTCATTAGGCCCCTGGTGCAGGCGGAGGTGAGGAGCCATGGGGGAGTGGGTGGGCATGCTGGGCGTGTGGCCCCTGGCTTGGGCAGCTCTCCTGCCTTGGCCCGGCCCTCCTCCCCTGAGGATGGTATGCTGCCCAGTGCACCCCATGCATGTCTTCGTGTGTCCCACCCAGATCACATGTGTGCTATCTCATGTGTTACATATTGTCTGATCTGGAGCCCAGTGGCAAGCCGGAACGTGCATCTCTAAGAATCATGTTCATTTCTTAAGAGGATAGGGCTTTGCTCCAAAGCCCTGGGGCCCTCCTAGCTCACCCTCCTAGTAGAGCTTGCCACCATCTCCATGTAGCAGCACATGGGGTGCCACTGGATCTGTTGAGTCAGAAGTGACAAGTGGCCAGGTGCAGTGGCTCATGTCTGTCATCCCAGCACATTAGGAGGCCGAGGTGGGTGGATCCCTTGAGGTCAGGAGTTCGTGACCAGCCTGGCCAACATGGTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGTGGGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAAAATCGTTTGAACCCAGGAGGAAGAGGCTGCAGTGAGCTGAGATCACACCACTGCACTCCAGCCTGGGTGACAGAGGAAGGCTCCATCTCAAAAAAAGAAAAGAAAAGAAAAAGGCTGGGTGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGACTACCTGAGCTCAGGAGTTTGTGACCAGCCTGGCCAACATG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_8500:HG2_PB_pbsv_11994:HG4_PB_SVrefine2PBcRDovetail_6010:HG2_PB_PB10Xdip_5034:HG2_PB_PB10Xdip_5033:HG3_PB_assemblyticsfalcon_3766:HG4_PB_assemblyticsfalcon_3699:HG2_PB_assemblyticsPBcR_3664:HG3_PB_SVrefine2Falcon1Dovetail_7258:HG2_Ill_SVrefine2DISCOVARplusDovetail_1862:HG3_PB_SVrefine2PBcRDovetail_5601:HG3_Ill_SVrefine2DISCOVARDovetail_8728:HG2_PB_SVrefine2Falcon1plusDovetail_1690:HG4_PB_SVrefine2Falcon1Dovetail_7289:HG2_PB_SVrefine2PBcRplusDovetail_1605:HG2_PB_SVrefine2PB10Xhap12_8656:HG2_PB_SVrefine2Falcon2Bionano_5807;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_5033:HG2_PB_PB10Xdip_5034;NumExactMatchSVs=2;ClusterMaxShiftDist=0.108752;ClusterMaxSizeDiff=0.108752;ClusterMaxEditDist=0.172862;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=6023;DistBack=-150;DistForward=5265;DistMin=-150;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=253;REFWIDENED=11:1558888-1559140;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9995;PctRecOverlap=0.9993;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=788.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:77:1/1:0:36:0:29:./.:1:6:0:5:1/1:1:34:1/1:1:492:.:6174:.
chr11	1598279	HG4_Ill_manta_2832	C	CCAGCTAAAGGGATCCTCCCATCACAGCCTCCTGAGTAGCTGGCACTACAGGCATGTGCCAGCATG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_14995:HG2_PB_pbsv_11997:HG4_Ill_manta_2832:HG4_Ill_Krunchall_16504:HG4_Ill_GATKHC_19135:HG4_Ill_GATKHCSBGrefine_8244:HG4_Ill_250bpfermikitraw_15769:HG4_Ill_150bpfermikitraw_15138:HG2_Ill_manta_3340:HG2_Ill_Krunchall_16250:HG2_Ill_GATKHC_19155:HG2_Ill_GATKHCSBGrefine_8047:HG2_Ill_250bpfermikitraw_15914;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14995:HG4_Ill_manta_2832:HG4_Ill_Krunchall_16504:HG4_Ill_GATKHC_19135:HG4_Ill_GATKHCSBGrefine_8244:HG4_Ill_250bpfermikitraw_15769:HG4_Ill_150bpfermikitraw_15138:HG2_Ill_manta_3340:HG2_Ill_Krunchall_16250:HG2_Ill_GATKHC_19155:HG2_Ill_GATKHCSBGrefine_8047:HG2_Ill_250bpfermikitraw_15914;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.139535;PBcalls=1;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=64;DistForward=4030;DistMin=64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=11:1598278-1598280;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:25:2:1:24:./.:4:23:13:0:0/1:27:19:./.:.:.:.:.:.
chr11	1642943	HG4_PB_pbsv_11969	G	GGAGCCCCCCAGCCAGAAAGCACAGCTACCGCCTTGGAACCCCACTGGAGCCACAGCACCCTTGGATCCCCACAGGAGCCACAGCCCCCCTGGACCCCCACAGGAGACACAGCCCCCTTGGAAACCCCGCACAGGAGCGACAGCCCCCCTTGAACCCCCCCAGGAAGACACAGACCCCCTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5810:HG2_PB_pbsv_11998:HG4_PB_SVrefine2PBcRDovetail_6013:HG4_PB_pbsv_11969:HG2_PB_SVrefine2Falcon1plusDovetail_1693;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_11969;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0560224;ClusterMaxSizeDiff=0.0280112;ClusterMaxEditDist=0.221607;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=180;DistBack=-171;DistForward=6607;DistMin=-171;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=171;REFWIDENED=11:1642944-1643114;PctSeqSimilarity=0.9293;PctSizeSimilarity=1;PctRecOverlap=0.9834;SizeDiff=0;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=97;MatchId=790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:10:0|1:26:0:0:10:./.:19:1:8:0:0/0:11:0:./.:.:.:.:.:.
chr11	1707847	HG4_PB_SVrefine2Falcon1Dovetail_7299	G	GTCCTTCCTTCCTTCCTTCCTTCTTCCCTCCCTCACTTCCTTCCTTCTTCCCTCCCTGCCTCCCTCCCTTCCTTCTCTGCTCCCTCCCTCCCTCCTCCCTCCCCTCCTTCCCTGCCTCCCTCCTCCCTCCTTCTCTGCCTCCTTCCTCCCCCTTCCCTTCCTTCCTTTCCTTCTCTGCTCCCCCCCTCCCTCTTTCCCTCCCTCCCTCTTTCCCTCCCTTCCTCCTCCCTCCCCCTCCCTCCCTTCCTCCTTCCTTCTTTCTTTCCTTCCTTCCTTCCTGCTTCTCTCCCTTCCTCCCTCCCTCACTTCCTTCCTTCCTTCTTCTCTCCCTGCCTCCTCCCCTTCCTTCTCTGCTCCCTCCCTCCCCCCTTCCCTGCCTCCCTCTTCCCTCCTTCTTTGCCTCCTCCCTCCCTTCCCTTCCTTCCTTCTTCTCTGCTCCCTCCCTTCCTCCTCCCTCCTCCCTCCCTTCCTTCCTCCTTCTCTGCTCCCTGCCTCCCTCCTCCCTCCCCCCTTTCCCTGCCTCCCTCTTCCCTCCTTCCCTGCCTCTTCCCTCCCCCTTCCCTTCCTTCCTTCCTTCTCTGCTCCCTCCCTTTCCTCCTCCCCCCCTCCCTCTCTCCCTTCCTTCCTTCCTTCTCTGCTCCCTCCCTCCCTCCTCCCCCCTCCCTCCCTCCATTCCTTCTTCCTTGCTTCTTTCCTCCGGCTCTCCCTCCCTCCCTTCTCTGC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7299:HG2_PB_pbsv_12007:HG2_PB_SVrefine2Falcon1plusDovetail_1698:HG3_PB_SVrefine2Falcon1Dovetail_7267;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_7299;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0351865;ClusterMaxSizeDiff=0.0351865;ClusterMaxEditDist=0.190007;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=722;DistBack=791;DistForward=59;DistMin=59;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=487;REFWIDENED=11:1707848-1708334;PctSeqSimilarity=0.9662;PctSizeSimilarity=0.9958;PctRecOverlap=0.6667;SizeDiff=3;StartDistance=-239;EndDistance=-239;GTMatch=0;TruScore=87;MatchId=792.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:1|0:2:22:21:0:./.:8:0:7:29:0/0:9:0:0/1:10:9:.:.:.
chr11	1963338	HG2_PB_SVrefine2Falcon2Bionano_5816	G	GGGAAGGTGGGAGGGAGTGGGGGAGGAAGGTGGGAGGGAGGGGGGAGGAAGCTGGGAGGGAGGGGGGAGGAAGGTGGGAGGGAGGGGGGAGGAAGGTGGGAGGGAGGGGGGAGGAAGGTGGGAGGGAGGGGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1699:HG3_PB_SVrefine2PBcRDovetail_5609:HG3_PB_SVrefine2Falcon1Dovetail_7270:HG3_PB_pbsv_11689:HG4_PB_SVrefine2PBcRDovetail_6018:HG4_PB_pbsv_11988:HG2_PB_PB10Xdip_5073:HG2_PB_PB10Xdip_5072:HG2_PB_pbsv_12015:HG2_PB_SVrefine2PBcRplusDovetail_1610:HG2_PB_SVrefine2PB10Xhap12_8664:HG2_PB_SVrefine2Falcon2Bionano_5816;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5816:HG2_PB_SVrefine2PB10Xhap12_8664;NumExactMatchSVs=2;ClusterMaxShiftDist=0.268908;ClusterMaxSizeDiff=0.268908;ClusterMaxEditDist=0.368201;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=133;DistBack=447;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=11:1963339-1963396;PctSeqSimilarity=0.9878;PctSizeSimilarity=1;PctRecOverlap=0.7744;SizeDiff=0;StartDistance=-30;EndDistance=-30;GTMatch=0;TruScore=92;MatchId=794.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:30:./.:1:19:0:2:./.:0:6:0:3:./.:1:1:./.:.:.:.:2311:.
chr11	2259364	HG2_Ill_svaba_14904	C	CTGAAGACACAAGTAAGTTACATGAAGAAGTGGCCCAAATGCCCGTGGTCCCCATTCCTGCTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8396:HG4_PB_HySA_17373:HG2_PB_PB10Xdip_5344:HG2_PB_PB10Xdip_5345:HG2_PB_SVrefine2PB10Xhap12_8675:HG4_PB_pbsv_11996:HG2_PB_HySA_21753:HG2_PB_SVrefine2PB10Xhap12_8674:HG2_PB_pbsv_12024:HG4_PB_SVrefine2PBcRDovetail_6024:HG4_PB_SVrefine2Falcon1Dovetail_7305:HG4_Ill_svaba_14947:HG4_Ill_manta_2835:HG4_Ill_SVrefine2DISCOVARDovetail_8513:HG4_Ill_Krunchall_16518:HG4_Ill_GATKHC_19152:HG4_Ill_GATKHCSBGrefine_8257:HG4_Ill_250bpfermikitraw_15784:HG4_Ill_150bpfermikitraw_15150:HG2_PB_SVrefine2Falcon1plusDovetail_1706:HG2_Ill_svaba_14904:HG2_Ill_SVrefine2DISCOVARplusDovetail_1872:HG2_Ill_Krunchall_16261:HG2_Ill_GATKHC_19170:HG2_Ill_GATKHCSBGrefine_8057:HG2_Ill_250bpfermikitraw_15926:HG2_Ill_150bpfermikitraw_15003;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8396:HG4_PB_SVrefine2PBcRDovetail_6024:HG4_PB_SVrefine2Falcon1Dovetail_7305:HG4_Ill_svaba_14947:HG4_Ill_manta_2835:HG4_Ill_SVrefine2DISCOVARDovetail_8513:HG4_Ill_Krunchall_16518:HG4_Ill_GATKHC_19152:HG4_Ill_GATKHCSBGrefine_8257:HG4_Ill_250bpfermikitraw_15784:HG4_Ill_150bpfermikitraw_15150:HG2_PB_SVrefine2Falcon1plusDovetail_1706:HG2_Ill_svaba_14904:HG2_Ill_SVrefine2DISCOVARplusDovetail_1872:HG2_Ill_Krunchall_16261:HG2_Ill_GATKHC_19170:HG2_Ill_GATKHCSBGrefine_8057:HG2_Ill_250bpfermikitraw_15926:HG2_Ill_150bpfermikitraw_15003;NumExactMatchSVs=19;ClusterMaxShiftDist=0.206897;ClusterMaxSizeDiff=0.206897;ClusterMaxEditDist=0.293103;PBcalls=11;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=62;DistBack=4281;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=62;REFWIDENED=11:2259365-2259426;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:44:0|1:28:4:2:38:1|0:1:22:12:0:0/1:24:25:./.:.:.:.:.:.
chr11	2400682	HG2_Ill_GATKHC_19176	T	TTGAGGGAGGGTGTGGACCTGGGGGTAGGGGCTGAGGGAGTGTGGACCTGGGGGTGGGGGC	20	PASS	ClusterIDs=HG2_Ill_GATKHC_19176:HG4_PB_HySA_17379:HG2_PB_PB10Xdip_5349:HG2_PB_PB10Xdip_5348:HG2_PB_pbsv_12026:HG2_PB_HySA_21758:HG4_PB_pbsv_11998:HG3_PB_HySA_18026:HG4_Ill_GATKHC_19157:HG4_Ill_GATKHCSBGrefine_8258:HG3_Ill_GATKHC_19049:HG3_Ill_GATKHCSBGrefine_7936:HG2_PB_assemblyticsPBcR_3690;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHC_19176:HG4_Ill_GATKHC_19157:HG4_Ill_GATKHCSBGrefine_8258:HG3_Ill_GATKHC_19049:HG3_Ill_GATKHCSBGrefine_7936:HG2_PB_assemblyticsPBcR_3690;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.25;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=60;DistBack=6;DistForward=37;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=307;REFWIDENED=11:2400441-2400747;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=797.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:38:./.:0:0:0:0:./.:0:0:0:0:./.:2:5:./.:.:.:.:.:.
chr11	3118291	HG2_PB_PB10Xdip_5425	A	AGAGGGGGAAGATGGGAAGGGGAGGAGAGGAAGGAGGGGGAAGATGGGAGGAGGAGAAGAGGAAAGGGGGGAAGATGGGAGGAGGAGAGGAAAGGGGGGAAGACGGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGAAGGAGAGGAAAGAGGGGGAAGATGGGAGAAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAGGGGGGAAGACGGGAGGAGGAGAGGAAAGAGGGGGAAGACGGGAGAAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGAAAAGAGGGGGAAGATGGGAGGGGGAGGAGAGGAAAGAGGGGGAAGACGGGAAGAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGAAAAGAGGGGGAAGATGGGAGGGGGAGGAGAGGAAAGAGGGGGAAGACGGGAAGAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGGGGGGAAGATGGGAGGAGGAGAGGAAAGGGGGGAAGACGGGAGGAGGAGTGGAAAGAGGGGGAAGATGGGAGAAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAGGGGGGAAGACGGGAGGAGGAGAGGAAAGAGGGGGAAGACGGGAGAAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGAAAAGAGGGGGAAGATGGGAGGGGGAGGAGAGGAAAGAGGGGGAAGACGGGAAGAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGAAAAGAGGGGGAAGATGGGAGGGGGAGGAGAGGAAAGAGGGGGAAGACGGGAAGAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGGGGGAAGACGGGAGGAGGAGGACAGGAAAGAGGGGGAAGATGGGAGGAGAAGAGGAAAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7309:HG2_PB_pbsv_12031:HG4_PB_pbsv_12004:HG2_PB_HySA_21768:HG2_PB_PB10Xdip_5426:HG2_PB_PB10Xdip_5425:HG2_PB_HySA_21767:HG3_PB_pbsv_11704:HG2_PB_SVrefine2PB10Xhap12_8678:HG2_PB_SVrefine2Falcon2Bionano_5824:HG2_PB_SVrefine2PBcRplusDovetail_1618:HG3_PB_SVrefine2Falcon1Dovetail_7278:HG2_PB_SVrefine2Falcon1plusDovetail_1710;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_5425:HG2_PB_PB10Xdip_5426;NumExactMatchSVs=2;ClusterMaxShiftDist=0.106603;ClusterMaxSizeDiff=0.106603;ClusterMaxEditDist=0.254673;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1227;DistBack=6;DistForward=12;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=257;REFWIDENED=11:3118141-3118397;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9992;PctRecOverlap=0.9984;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=799.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:0:12:0:19:./.:17:135:9:86:./.:0:2:0/1:22:75:.:1159:.
chr11	3379995	HG2_Ill_SpiralSDKrefine_2410	C	CGTGCTCTATTCCTTTCTCCTTCAAATCCTCCATTGTTTACTTAAATTGGATT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_15023:HG3_PB_pbsv_11712:HG4_Ill_Cortex_516:HG4_PB_pbsv_12010:HG3_Ill_Cortex_545:HG2_Ill_Cortex_1197:HG2_PB_PB10Xdip_5434:HG2_PB_PB10Xdip_5433:HG2_PB_pbsv_12038:HG4_Ill_svaba_14967:HG4_Ill_manta_2837:HG4_Ill_Krunchall_16536:HG4_Ill_GATKHC_19175:HG4_Ill_GATKHCSBGrefine_8265:HG4_Ill_250bpfermikitraw_15802:HG4_Ill_150bpfermikitraw_15166:HG3_Ill_svaba_15085:HG3_Ill_scalpel_11482:HG3_Ill_manta_2728:HG3_Ill_Spiral_12460:HG3_Ill_Krunchall_15964:HG3_Ill_GATKHC_19068:HG3_Ill_GATKHCSBGrefine_7943:HG3_Ill_FB_10298:HG3_Ill_250bpfermikitraw_15508:HG3_Ill_150bpfermikitraw_15038:HG2_Ill_svaba_14924:HG2_Ill_scalpel_11295:HG2_Ill_manta_3344:HG2_Ill_SpiralSDKrefine_2410:HG2_Ill_Krunchall_16278:HG2_Ill_GATKHC_19190:HG2_Ill_GATKHCSBGrefine_8064:HG2_Ill_250bpfermikitraw_15945;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15023:HG4_Ill_svaba_14967:HG4_Ill_manta_2837:HG4_Ill_Krunchall_16536:HG4_Ill_GATKHC_19175:HG4_Ill_GATKHCSBGrefine_8265:HG4_Ill_250bpfermikitraw_15802:HG4_Ill_150bpfermikitraw_15166:HG3_Ill_svaba_15085:HG3_Ill_scalpel_11482:HG3_Ill_manta_2728:HG3_Ill_Spiral_12460:HG3_Ill_Krunchall_15964:HG3_Ill_GATKHC_19068:HG3_Ill_GATKHCSBGrefine_7943:HG3_Ill_FB_10298:HG3_Ill_250bpfermikitraw_15508:HG3_Ill_150bpfermikitraw_15038:HG2_Ill_svaba_14924:HG2_Ill_scalpel_11295:HG2_Ill_manta_3344:HG2_Ill_SpiralSDKrefine_2410:HG2_Ill_Krunchall_16278:HG2_Ill_GATKHC_19190:HG2_Ill_GATKHCSBGrefine_8064:HG2_Ill_250bpfermikitraw_15945;NumExactMatchSVs=26;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.339286;PBcalls=5;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=11:3379994-3379996;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=800.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:61:./.:0:3:0:0:./.:0:0:0:0:1/1:0:51:./.:.:.:.:.:.
chr11	4755987	HG2_PB_SVrefine2PB10Xhap12_8684	T	TTCTATATAAGCAGGGCATAGGCAGAATAGCATCGCATAGCATATTTATATAAGCAGGGCATAGGCAGAATAGCATCGCATAGCATATTTATATAAGCAGGGCATAGGCAGAATAGCATCGCATAGCATATTTATATAAGCAGGGCATAGGCAGAATAGCATCGCATAGCATA	10	PASS	ClusterIDs=HG2_PB_pbsv_12044:HG2_PB_HySA_21793:HG4_PB_pbsv_12017:HG3_PB_pbsv_11720:HG2_PB_SVrefine2PBcRplusDovetail_1625:HG2_PB_SVrefine2PB10Xhap12_8684:HG2_PB_PB10Xdip_5790;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8684:HG2_PB_SVrefine2PBcRplusDovetail_1625;NumExactMatchSVs=2;ClusterMaxShiftDist=0.138728;ClusterMaxSizeDiff=0.138728;ClusterMaxEditDist=0.168605;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=172;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=89;REFWIDENED=11:4755988-4756076;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=801.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:47:0|1:31:10:3:36:./.:0:23:10:5:0/1:6:29:./.:.:.:.:.:.
chr11	5126945	HG2_PB_SVrefine2Falcon1plusDovetail_1718	G	GAAAGAATACAAATCTTGTGCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCCCTCCCCTCCCTCTCCCTCCTCTCCCTCTCCCTCCACGGTCTCCCTCTGATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCACCGCCACGCCTGACTGGTTTTCGTTTTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAGCCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTGGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGATGTGAGGAGCGCCTCTGCTGGGCCGCAGCCCTGTCTGGGAGGTGGGAGCGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCATGGAGGGAGGCGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCTGGCCAGCCGCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCGCCTGGCCAGTCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGAAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGGGGGGGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCTTCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGACAGCCCCCGCCCAGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGTCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAATAATTAATTAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7288:HG3_PB_pbsv_11723:HG2_PB_assemblyticsfalcon_3839:HG2_PB_HySA_21797:HG3_PB_HySA_18062:HG4_PB_SVrefine2Falcon1Dovetail_7319:HG2_PB_SVrefine2Falcon1plusDovetail_1718:HG3_PB_SVrefine2PBcRDovetail_5626:HG2_PB_SVrefine2PBcRplusDovetail_1628:HG2_Ill_breakscan11_4244;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1718;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0509733;ClusterMaxSizeDiff=0.0509733;ClusterMaxEditDist=0.134042;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=2472;DistBack=-8469;DistForward=-1;DistMin=-8469;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=11:5126946-5126963;PctSeqSimilarity=0.9894;PctSizeSimilarity=0.9837;PctRecOverlap=0.9841;SizeDiff=-41;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:45:0|1:40:0:1:37:0|1:32:0:0:6:0/1:18:5:0/1:85:236:.:2620:.
chr11	5135413	HG3_Ill_GATKHCSBGrefine_7949	G	GAGTTTTCTTAATGTTGAGTTCTAATTTGATTGTGCTGCGGTCTGAGATGTTATGATTTCAGTTTTTTGGGGTTTTTTTGTTTTTTTTGCATTTGCTCAGGAGTGTTTTACTTCTGATTATGTAATTGCTTTCAGCGTAAGTGCCATGTGGTGATGAGAAAAATGTGTATTCTATTGTTTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8424:HG2_PB_HySA_21798:HG2_PB_pbsv_12048:HG3_PB_pbsv_11724:HG4_PB_SVrefine2Falcon1Dovetail_7320:HG3_PB_SVrefine2PBcRDovetail_5627:HG2_Ill_breakscan11_4245:HG3_Ill_svaba_15097:HG3_Ill_manta_2730:HG3_Ill_Spiral_12470:HG3_Ill_MetaSV_731:HG3_Ill_GATKHCSBGrefine_7949:HG2_PB_assemblyticsfalcon_3840:HG2_PB_SVrefine2Falcon1plusDovetail_1719:HG2_Ill_svaba_14937:HG2_Ill_manta_3347:HG2_Ill_MetaSV_737:HG2_Ill_GATKHCSBGrefine_8068:HG2_PB_SVrefine2Falcon1plusDovetail_1720;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8068:HG2_Ill_MetaSV_737:HG2_Ill_manta_3347:HG2_Ill_svaba_14937:HG2_PB_SVrefine2Falcon1plusDovetail_1719:HG2_PB_assemblyticsfalcon_3840:HG3_Ill_GATKHCSBGrefine_7949:HG3_Ill_MetaSV_731:HG3_Ill_Spiral_12470:HG3_Ill_manta_2730:HG3_Ill_svaba_15097;NumExactMatchSVs=11;ClusterMaxShiftDist=0.233918;ClusterMaxSizeDiff=0.233918;ClusterMaxEditDist=0.274854;PBcalls=8;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=180;DistBack=-2;DistForward=4805;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=11:5135414-5135413;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=803.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:0|1:32:3:1:21:0|1:52:0:0:24:0/1:23:15:./.:.:.:.:2620:.
chr11	5570685	HG2_Ill_150bpfermikitraw_15040	C	CCAACAATTCTGAAAGCCAAGTCAGTTTTTGTCAATGTTTGTCAAACGTTTGCTAAATACTGTTGAATGTGTTAATTAATAAAGATGGCCAGGAGTCCACT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_15040:HG2_PB_pbsv_12050:HG3_PB_SVrefine2PBcRDovetail_5628:HG3_PB_SVrefine2Falcon1Dovetail_7290:HG3_Ill_SVrefine2DISCOVARDovetail_8750:HG2_PB_SVrefine2Falcon2Bionano_5832:HG2_Ill_SVrefine2DISCOVARplusDovetail_1892:HG2_10X_SVrefine210Xhap12_8426:HG3_PB_HySA_18072:HG2_PB_HySA_21811:HG3_Ill_Krunchall_15988:HG3_Ill_GATKHCSBGrefine_7950:HG2_Ill_Krunchall_16299:HG2_Ill_GATKHC_19211:HG2_Ill_GATKHCSBGrefine_8069:HG2_Ill_250bpfermikitraw_15968;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15040:HG3_Ill_Krunchall_15988:HG3_Ill_GATKHCSBGrefine_7950:HG2_Ill_Krunchall_16299:HG2_Ill_GATKHC_19211:HG2_Ill_GATKHCSBGrefine_8069:HG2_Ill_250bpfermikitraw_15968;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0492611;ClusterMaxSizeDiff=0.00985222;ClusterMaxEditDist=0.187192;PBcalls=6;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=100;DistBack=1156;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=11:5570686-5570787;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=805.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:34:0|1:26:4:3:30:0|1:7:0:1:36:0/1:21:22:./.:.:.:.:.:.
chr11	5865389	HG2_Ill_SVrefine2DISCOVARplusDovetail_1894	T	TATATATATTTTATATATAATATATATTTATATATATATTTTTATATATAATATATATTATATATATTATATATATTATATATTATATATATTATATTATATTATATATATTATATATATTATATATATAATATATATTATATATATTATATATAATATATATTATATATAATATATATAATATATATTATATATAATATATATTATATATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7323:HG2_PB_pbsv_12053:HG3_PB_pbsv_11734:HG3_Ill_GATKHC_19098:HG3_Ill_GATKHCSBGrefine_7956:HG4_Ill_GATKHC_19197:HG4_Ill_GATKHCSBGrefine_8272:HG2_PB_PB10Xdip_5974:HG4_PB_pbsv_12023:HG2_PB_SVrefine2Falcon2Bionano_5835:HG2_Ill_SVrefine2DISCOVARplusDovetail_1894:HG2_PB_SVrefine2PBcRplusDovetail_1631:HG2_PB_SVrefine2PB10Xhap12_8688:HG2_PB_SVrefine2Falcon1plusDovetail_1723:HG3_PB_SVrefine2Falcon1Dovetail_7294:HG4_Ill_SVrefine2DISCOVARDovetail_8533:HG4_PB_SVrefine2PBcRDovetail_6035;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1894:HG2_PB_SVrefine2Falcon2Bionano_5835;NumExactMatchSVs=2;ClusterMaxShiftDist=0.130751;ClusterMaxSizeDiff=0.130751;ClusterMaxEditDist=0.226852;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=211;DistBack=-208;DistForward=24;DistMin=-208;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=208;REFWIDENED=11:5865390-5865597;PctSeqSimilarity=0.9722;PctSizeSimilarity=0.9953;PctRecOverlap=0.5545;SizeDiff=1;StartDistance=-94;EndDistance=-94;GTMatch=0;TruScore=84;MatchId=807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:1:31:3:17:./.:0:0:0:3:1/1:1:30:./.:.:.:.:.:.
chr11	5896446	HG2_PB_SVrefine2Falcon2Bionano_5836	A	ACTGAAAATGAAAACATTTTCAGAAATTTAATGCAAATTTTAATTGCAACTTTCTCCAAAAGAGAAAAAAATTTTTCAAAGATACTTGCTAAGAGAACAAAAATAATAGAAATGTTTTAAAAAGAGTAACAAAGTTTTTTCAGTGAATTAAATGTTTTTAAACCATTTCTATTATTTTTGTTTTCTTAGCATATATCTTAAAAATTTTTTTTCTCTCTTGGAGAAAGTTGCAGTTAAAATTTGCATTAAATTT	20	PASS	ClusterIDs=HG3_PB_pbsv_11735:HG2_PB_PB10Xdip_5975:HG2_PB_pbsv_12054:HG4_PB_pbsv_12024:HG2_PB_assemblyticsfalcon_3853:HG2_PB_assemblyticsPBcR_3732:HG4_PB_SVrefine2PBcRDovetail_6036:HG4_PB_SVrefine2Falcon1Dovetail_7324:HG4_Ill_manta_2840:HG4_Ill_SVrefine2DISCOVARDovetail_8534:HG4_Ill_MetaSV_772:HG4_Ill_GATKHCSBGrefine_8273:HG3_PB_SVrefine2PBcRDovetail_5634:HG3_Ill_SVrefine2DISCOVARDovetail_8756:HG3_Ill_MetaSV_736:HG3_Ill_GATKHCSBGrefine_7958:HG2_PB_SVrefine2PBcRplusDovetail_1632:HG2_PB_SVrefine2PB10Xhap12_8689:HG2_PB_SVrefine2Falcon2Bionano_5836:HG2_PB_SVrefine2Falcon1plusDovetail_1724:HG2_Ill_SVrefine2DISCOVARplusDovetail_1895:HG2_Ill_MetaSV_739:HG2_Ill_GATKHCSBGrefine_8071:HG2_10X_SVrefine210Xhap12_8431:HG3_PB_SVrefine2Falcon1Dovetail_7295;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8431:HG2_Ill_GATKHCSBGrefine_8071:HG2_Ill_MetaSV_739:HG2_Ill_SVrefine2DISCOVARplusDovetail_1895:HG2_PB_SVrefine2Falcon1plusDovetail_1724:HG2_PB_SVrefine2Falcon2Bionano_5836:HG2_PB_SVrefine2PB10Xhap12_8689:HG2_PB_SVrefine2PBcRplusDovetail_1632:HG3_Ill_GATKHCSBGrefine_7958:HG3_Ill_MetaSV_736:HG3_Ill_SVrefine2DISCOVARDovetail_8756:HG3_PB_SVrefine2PBcRDovetail_5634:HG4_Ill_GATKHCSBGrefine_8273:HG4_Ill_MetaSV_772:HG4_Ill_SVrefine2DISCOVARDovetail_8534:HG4_Ill_manta_2840:HG4_PB_SVrefine2Falcon1Dovetail_7324:HG4_PB_SVrefine2PBcRDovetail_6036;NumExactMatchSVs=18;ClusterMaxShiftDist=0.106299;ClusterMaxSizeDiff=0.106299;ClusterMaxEditDist=0.245681;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=252;DistBack=30900;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=11:5896447-5896455;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=808.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:33:0:36:./.:2:27:1:41:0/1:4:29:./.:.:.:.:.:.
chr11	6370969	HG4_Ill_250bpfermikitraw_15823	G	GAAGGTCAGGAGATCCAGACATTCCTGGCTAACACAGTGAAACCCCATCTCTACTAAAAATACAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_21818:HG2_PB_pbsv_12055:HG4_Ill_SVrefine2DISCOVARDovetail_8535:HG4_PB_HySA_17426:HG2_PB_SVrefine2PBcRplusDovetail_1633:HG4_Ill_250bpfermikitraw_15823;NumClusterSVs=6;ExactMatchIDs=HG4_Ill_250bpfermikitraw_15823:HG4_Ill_SVrefine2DISCOVARDovetail_8535;NumExactMatchSVs=2;ClusterMaxShiftDist=0.10219;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.218978;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=39560;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=136;REFWIDENED=11:6370970-6371105;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:18:./.:6:12:17:1:./.:2:1:6:1:0/1:19:8:./.:.:.:.:.:.
chr11	7092788	HG2_PB_SVrefine2PB10Xhap12_8692	T	TAAGAATGCAGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG4_PB_pbsv_12028:HG4_PB_HySA_17434:HG2_PB_PB10Xdip_6074:HG2_PB_pbsv_12058:HG3_PB_pbsv_11737:HG2_PB_assemblyticsPBcR_3737:HG2_PB_assemblyticsfalcon_3860:HG2_PB_HySA_21824:HG4_PB_SVrefine2Falcon1Dovetail_7326:HG3_PB_SVrefine2Falcon1Dovetail_7298:HG2_PB_SVrefine2PBcRplusDovetail_1636:HG2_PB_SVrefine2PB10Xhap12_8692:HG2_PB_SVrefine2Falcon2Bionano_5838:HG2_10X_SVrefine210Xhap12_8435:HG4_PB_SVrefine2PBcRDovetail_6039:HG2_Ill_breakscan11_4246:HG2_PB_SVrefine2Falcon1plusDovetail_1727;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5838:HG2_PB_SVrefine2PB10Xhap12_8692:HG2_PB_SVrefine2PBcRplusDovetail_1636;NumExactMatchSVs=3;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.225237;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=343;DistBack=8752;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=11:7092789-7092800;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:75:./.:0:0:0:0:./.:0:0:0:0:1/1:0:28:1/1:2:76:.:.:.
chr11	8180312	HG2_Ill_breakscan11_4247	T	CTCTGTCACCCAGGCTGGAGGGCAGTGGCACGATCTCGGGTCACTGCTTTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACCACAGGCATGCACCACCTTGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCCGATCTCAGGCGATCTGTCTGCCTCAGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACCGTGCCTGGCCCAGAGTTAAGAAGTTTTAAAAACAGACATAATGCCATGGCATGAGACGCTCTCTGAGAGGAAAGCCCTTAAAATGCCTTTCTATATGGGCACTTCAAAAATTCTCAGGCAGGTAGGAACAGCAGAGGAAAAAAAAAGTAGATGTGCAGGTAGCTCTTCTAAAAGGACAGAAAAGATGAACAGACAGACACGTAAGTAATCAGCATGAAAGAGTGGCAAGACTTGGAAGAGTGACATGAGGAGGCCAAGGCCCAAAAGAAATCCAGATTTACAAAAAGGCCAGCAAAAGCAAAAGGGGTGTTTTTAGTGATGTTTAGAGAAAAAAGGTAATTTGCCTTAGGATAAAATGTAATGGTAAGAAAACAGAACTTGCCAACTTCCATTTTGTTTCTATATCAAAGGGGATAAGTTTCTGGTGCAGTGGAGAATGAACAATTCTAAGGACAAAAGTAAAGTCCCAGAGGAGGATAAATTCAAGTCTATTCACTAAATAATTTCTATCAAGAGAACTGGGAAAACTTCCAAATAAGGTCACTGAACTAAAGAAAAATTTAAGAAATTATGTTGGTAAAAAGTGAAGTCTTAAAAGAATGGAGATAGAGAACTACCGTTCCAGTCTGAGGAAAGTAGAAAGTGGATGACAAACTCTACAAACTACAGAGAAGTGAACATGTTGTAACCCTTGGGCTAGATTCTAAAAAGGACTCAAATTTTTTTGAATGGATATGGAAGGGAAAAGAAAGTACTTTTCTTCTGATTATAAAAGAAATGCATACCTACAGAAAACTGAGAAAGTACAGAAAAATTTAAAGAACAACCCCTCGTAATTACATGATCTAGAAATATCCACTGTTAAAATGTTGAGTTCTTTTTTTTTTATTATTATTATACTTTAAGTTCTAGGGTACATTTGCATAATGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTTGTCATTTACATTAGGTATATCTCCTAATGCTATCCCTCCCCACCCCCACCCCACAACAGACCCCGGTGTGTGATGTTCCCCTTCCTGTGAAAATGCTGACATCTTTCTAGTGAGTATATATCTTTATTTTTCACTTGTATCATACAATGTTCCCATGTCATTTAAAACTCTTCATGAATATAAATTACTGAATTCATAATAGTCTATCACATGGATGCATGATCATTTATGTAACCATAATGAATGTAATAATAATAAGGTAATGGCTTACAAATGCTAATAGAGGAAGTCATGATCCCTAGGAGCCAGCTCTCATTAATTAACTCATTCTTTTACTCGGTCAATAAATATTTATTGTCTACTTACGTGCAGGCCTCATCTAAAGCTGGACACACAGCCATGAACAAAACAAATATAAATCCTTATCCTCACGGAGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATGGAGTCTCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5640:HG2_PB_pbsv_12064:HG3_PB_pbsv_11745:HG2_PB_HySA_21830:HG3_PB_HySA_18087:HG4_PB_HySA_17441:HG2_PB_PB10Xdip_6223:HG2_Ill_breakscan11_4247:HG4_PB_pbsv_12036:HG3_PB_SVrefine2Falcon1Dovetail_7306:HG4_Ill_SVrefine2DISCOVARDovetail_8542:HG4_PB_SVrefine2PBcRDovetail_6044:HG2_Ill_SVrefine2DISCOVARplusDovetail_1903:HG2_PB_SVrefine2Falcon1plusDovetail_1733:HG2_PB_SVrefine2PB10Xhap12_8698:HG2_PB_SVrefine2Falcon2Bionano_5844:HG2_PB_SVrefine2PBcRplusDovetail_1642:HG2_10X_SVrefine210Xhap12_8441:HG4_PB_SVrefine2Falcon1Dovetail_7331:HG3_Ill_SVrefine2DISCOVARDovetail_8763;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_breakscan11_4247:HG2_PB_PB10Xdip_6223;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0630553;ClusterMaxSizeDiff=0.0613356;ClusterMaxEditDist=0.185527;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1721;DistBack=-271;DistForward=3195;DistMin=-271;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:8180313-8180311;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=0.9988;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=812.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:1/1:0:26:0:41:./.:0:13:1:3:1/1:1:37:./.:18:225:.:1697:.
chr11	8446356	HG2_PB_SVrefine2PBcRplusDovetail_1644	A	ATCCTTTGCCCACTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACGACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8444:HG3_PB_HySA_18089:HG4_PB_pbsv_12039:HG2_PB_PB10Xdip_6273:HG3_PB_pbsv_11746:HG2_PB_pbsv_12067:HG2_PB_assemblyticsfalcon_3873:HG4_PB_SVrefine2PBcRDovetail_6046:HG3_PB_SVrefine2PBcRDovetail_5641:HG3_PB_SVrefine2Falcon1Dovetail_7307:HG2_PB_SVrefine2PBcRplusDovetail_1644:HG2_PB_SVrefine2PB10Xhap12_8700:HG2_PB_SVrefine2Falcon2Bionano_5846:HG4_PB_SVrefine2Falcon1Dovetail_7333:HG4_Ill_GATKHCSBGrefine_8285:HG3_Ill_GATKHCSBGrefine_7969:HG2_PB_SVrefine2Falcon1plusDovetail_1734:HG2_Ill_GATKHCSBGrefine_8081;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5846:HG2_PB_SVrefine2PB10Xhap12_8700:HG2_PB_SVrefine2PBcRplusDovetail_1644:HG3_PB_SVrefine2Falcon1Dovetail_7307:HG3_PB_SVrefine2PBcRDovetail_5641;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0670732;ClusterMaxSizeDiff=0.0609756;ClusterMaxEditDist=0.166915;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=321;DistBack=110304;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=11:8446357-8446373;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=813.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:0:5:1:39:./.:0:0:1:2:1/1:0:15:1/1:2:75:.:.:.
chr11	8839664	HG3_PB_pbsv_11750	C	CATCTTTAAAAAAAACATTAGCCTGGCCTCTCCCTCTCTCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTACCCCTCTCCCCCTTCCCACGGTCTCCTTCCATCGGTCTCCCTCGATGCCGAGCAAAGCTAGGACGGTACTCTGCCATCTCGGCATCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCTGGAGAGCAGCCGCCGCCACGCCGACTAGGTTTTCGCATTTTTTTTTTTTTGGTGGAGACAGGGGTTTTGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAAACCCGCGAGTGATCCGCCAGCCCTTCGGCTCCCGAACGGTGCCGGAGATTGCAGACGGGAGTCTTGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCGCTGCAACCTCACCTCCCAGCGCCTTGCCTTGGCCCCCCAAAGGTGGCCGAGATTGCAGCCTCTGCCCAGCCGCCATCCCGTCTGGGAAAGTGAGGAGCGTCTCTAGCCTGGGCCCCCCATCGTACTGGATATTGAGGAGCCTCTCTGCCTAGGCTGCCAGTCTGGAAGAGTGAGCGAGCGTCTCTGCACCGGCCGCCATCCCATCTAGGAACCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCTGCCGCCCATCGTCTGAGATGTGGAGCACCTCTGTTCCCGCCGCCCTGCTCTGGGAGTGGAGGAGCGTCTCTGCCCCGGCCGCCCCGTTCTGCAGAAGTGAGGAACCCTCTGCCTTGGAACCCCCCGTTGAGAAGTGAGGCAAGCCCTCGTCCCGGCAGCCACCACCGCTCTGGGAAGTTGAGGAGCGGGTTCTCCGCCCAGGCAGCCACCCGACCGGGAGCGGAGGTGGGGGGGGGTCAGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGCTCCTTCTGCCCGCCGCCCCTACTGCGGAAGTGAGAGCCCCTCTGCCAACGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGCTTCAGCCCCCCGCCCGGTAGCAACGCCAGTCCGGGAGGTAGGTTCGGTGCGGGGTCAGCCCTCCGCCCGGCCAGCCACCCCGTCCGGCGAGGGTGAGGAGGCCGCCTCTGCCCGGCCGCCCCTACTGGGGACAGTCGAGGACACCCTCTGGCCCGGCCAGCCGCCCCGTCCGCGGAGGTGACGGTGGGGGATCAGCCCCCGCCGCGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGCGGGACAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGATTGTGAGGGGCGCCTCTGCCCCGGCCGCCCCTACTGGGAAGTTGAGGAGGCCCCATCTGCGCCGGCCAGCCGCCCCGTTCCGGGAGGGACGGTGGGGGGCGTCAGCCCCCGCCCGGCCGGCTCCGCCCCGTCCGGAGGTGAGGGACGCCTCTTGCCCGGCCGCCCCTACTGGGAAGTTGAGGACCCCTTCTAGCCTGGCCAGCCGCCCCGTTCCGGAGGGTGGGTGGCGGCGTCACCCCCCCGCCTGGCCAGCCGCGCCCATCCGGGAGGTGAGGGGCCGCTTCTGCACCGGCCGCCCCTACTGGGAAATGAGGAGCCCCTCTGCCCCGAGGCCACGACCCCGTCGCGGCAGGTGTGCCCAGCGGCTCATTGGGGATGGCGCCATGATGACACAATGGCGGTTTTGGGAATAGAAGAGGCTGGCGAAGAGTGGGGAAAAAATTGGAGGAAATCGGATTAGGTTTGCCGGCGTCTGTGTGGATAGAGCGTAGACATGGGAGACTTTTCATTTTGTTCGTGTACTAAGAAATTCTTCTGCTGGGATCCTGTGGATCTGTGGACCTTTAGTCCCCAAACCCTGTTGCTCTCTGAAAACATGTTGCTGGTGTCCATCAGGTTAAATGGATTGGTGGGCGGTGCATAAGGATGTGCTTGTTAAACAGATGCTTGAAGGCAGCATTGCTTTCGTTAAGAGTCATTCAACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGGAAGGCCGCAGGGTCCTCTGGCCTAGGAAAACAGAGACCTTTGCTTACCTTGTTTATTTCTTACTGCACCTTCCCTCCCACTATTTTCCTCTATGACCCTTGCCAAATCCCCCTACTGCGAGAAAACACCCTAAAGAATGATCCAATAAAAAATAAAAAATAAAAAATAAAAAATAAATAAAAAATAAAAAAAAAATACAACAAACTAG	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_6274:HG4_PB_pbsv_12041:HG4_PB_HySA_17450:HG3_PB_pbsv_11750:HG2_PB_pbsv_12071:HG3_PB_SVrefine2Falcon1Dovetail_7309:HG2_PB_SVrefine2PBcRplusDovetail_1646:HG2_PB_SVrefine2Falcon1plusDovetail_1735:HG3_PB_SVrefine2PBcRDovetail_5642:HG4_PB_SVrefine2PBcRDovetail_6048:HG2_PB_SVrefine2Falcon2Bionano_5847:HG2_PB_SVrefine2PB10Xhap12_8701:HG3_PB_HySA_18092:HG2_PB_HySA_21837;NumClusterSVs=14;ExactMatchIDs=HG3_PB_pbsv_11750;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0921053;ClusterMaxSizeDiff=0.0912281;ClusterMaxEditDist=0.231121;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=2300;DistBack=0;DistForward=45227;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=11:8839665-8839664;PctSeqSimilarity=0.9539;PctSizeSimilarity=0.9543;PctRecOverlap=0.9539;SizeDiff=105;StartDistance=18;EndDistance=18;GTMatch=1;TruScore=95;MatchId=815.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:100:1/1:0:31:0:29:./.:0:10:3:15:0/1:4:36:0/1:11:87:.:2416:.
chr11	8887300	HG4_Ill_GATKHCSBGrefine_8286	T	TAAGAGAGATTAAATCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4248:HG4_PB_pbsv_12042:HG2_PB_pbsv_12072:HG2_PB_assemblyticsfalcon_3881:HG4_PB_HySA_17452:HG4_PB_SVrefine2Falcon1Dovetail_7335:HG2_Ill_MetaSV_745:HG2_PB_SVrefine2Falcon2Bionano_5848:HG3_PB_pbsv_11751:HG4_PB_SVrefine2PBcRDovetail_6049:HG4_Ill_MetaSV_779:HG4_Ill_GATKHCSBGrefine_8286:HG3_Ill_MetaSV_744:HG3_Ill_GATKHCSBGrefine_7970:HG3_PB_SVrefine2Falcon1Dovetail_7310:HG2_PB_SVrefine2Falcon1plusDovetail_1736;NumClusterSVs=16;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_7970:HG3_Ill_MetaSV_744:HG4_Ill_GATKHCSBGrefine_8286:HG4_Ill_MetaSV_779:HG4_PB_SVrefine2PBcRDovetail_6049;NumExactMatchSVs=5;ClusterMaxShiftDist=0.204511;ClusterMaxSizeDiff=0.204511;ClusterMaxEditDist=0.285714;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=321;DistBack=2406;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=11:8887301-8887317;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=816.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:0|1:25:2:0:21:0|1:13:0:0:7:0/1:25:9:0/1:5:25:.:.:.
chr11	10271239	HG4_Ill_SVrefine2DISCOVARDovetail_8556	T	TTTGGAATGCTATGGGGGAGTCCATAGCATTGGAATGCTATGGGGGAGTCCATAGCATTGGAATGCTATGGGGGAGTCCATAGCATTGGAATGCTATGGGGGAGTCCATAGCATTGGAATGCTATGGGGGAGTCCATAGCATTGGAATGCTATGGGGGAGTCCATAGCATTGGAATGCTATGGGGGAGTCCATAGCATTGGAATGCTATGGGGGAGTCCATAGCATTGGAATGCTATGGGGGAGTCCATAGCATTGGAATGCTATGGGGGAGTCCATAGCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5648:HG3_PB_pbsv_11765:HG2_PB_pbsv_12086:HG3_Ill_SVrefine2DISCOVARDovetail_8773:HG4_PB_pbsv_12054:HG4_Ill_SVrefine2DISCOVARDovetail_8556:HG3_PB_SVrefine2Falcon1Dovetail_7318:HG2_PB_SVrefine2Falcon1plusDovetail_1744;NumClusterSVs=8;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_8556;NumExactMatchSVs=1;ClusterMaxShiftDist=0.273603;ClusterMaxSizeDiff=0.273603;ClusterMaxEditDist=0.308851;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=280;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=211;REFWIDENED=11:10271240-10271450;PctSeqSimilarity=0.8893;PctSizeSimilarity=0.8;PctRecOverlap=0.8007;SizeDiff=56;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=83;MatchId=817.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:40:0|1:26:2:3:38:./.:1:0:2:0:0/1:3:12:./.:.:.:1087:.:.
chr11	10733385	HG2_PB_pbsv_12090	A	AAAAAATGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCGTCTGTGCGCCCTAGGCTGGAAGTGCAGTGGCGGATCTCGCTCACTGCAAGCTCCGCCTCCCGGGTTTTCAACACGCCATCTCCTGCCTCAGCCTCCCAAGTAGGCCTGGGACTACAGGGCCCGCCACACGCCGGCAATTTTTTTTTGTATTTTTAGTAGAGACGGGCTTTCAAAAAACCGTTTAGGGGCCGGGATGGCCCGATCCTCTGACGCTAGTGATCCGCCCGCCTCGGCTCCAAGTGTGGAATTACAAGGCGTGAGCCACCGCCGGCCAGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1657:HG2_PB_PB10Xdip_4868:HG2_PB_PB10Xdip_4869:HG4_PB_pbsv_12059:HG4_PB_assemblyticsfalcon_3809:HG2_PB_assemblyticsfalcon_3908:HG4_PB_SVrefine2PBcRDovetail_6059:HG2_PB_pbsv_12090:HG4_PB_SVrefine2Falcon1Dovetail_7339:HG3_PB_SVrefine2Falcon1Dovetail_7319:HG2_PB_SVrefine2PB10Xhap12_8715:HG2_PB_SVrefine2PB10Xhap12_8716:HG2_PB_SVrefine2Falcon2Bionano_5855:HG2_PB_SVrefine2Falcon1plusDovetail_1746:HG4_PB_HySA_17477:HG2_PB_HySA_21859:HG2_Ill_breakscan11_4250;NumClusterSVs=17;ExactMatchIDs=HG2_PB_pbsv_12090;NumExactMatchSVs=1;ClusterMaxShiftDist=0.3;ClusterMaxSizeDiff=0.3;ClusterMaxEditDist=0.334459;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=336;DistBack=-10;DistForward=35374;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:10733381-10733395;PctSeqSimilarity=0.9248;PctSizeSimilarity=0.9821;PctRecOverlap=0.9763;SizeDiff=6;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=96;MatchId=818.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:33:0|1:25:0:2:30:./.:22:0:1:8:0/1:21:5:0/1:12:15:.:.:.
chr11	10823576	HG3_PB_SVrefine2Falcon1Dovetail_7320	C	CACACTCCTAAAATAGTTTCATGTTTTAATAGCAAATGAAATCACATATATTGCATAATTTAACATTTGTTGCCTAA	20	PASS	ClusterIDs=HG2_PB_HySA_21860:HG2_PB_pbsv_12091:HG3_PB_pbsv_11769:HG4_PB_assemblyticsfalcon_3810:HG2_PB_PB10Xdip_4871:HG2_PB_PB10Xdip_4870:HG4_PB_SVrefine2Falcon1Dovetail_7340:HG4_Ill_250bpfermikitraw_15869:HG4_Ill_150bpfermikitraw_15237:HG3_PB_SVrefine2PBcRDovetail_5650:HG3_PB_SVrefine2Falcon1Dovetail_7320:HG3_Ill_manta_2737:HG3_Ill_Spiral_12511:HG3_Ill_SVrefine2DISCOVARDovetail_8775:HG3_Ill_Krunchall_16048:HG3_Ill_GATKHC_19146:HG3_Ill_GATKHCSBGrefine_7981:HG3_Ill_250bpfermikitraw_15582:HG3_Ill_150bpfermikitraw_15108:HG2_PB_assemblyticsfalcon_3909:HG2_PB_SVrefine2PBcRplusDovetail_1658:HG2_PB_SVrefine2PB10Xhap12_8717:HG2_PB_SVrefine2Falcon2Bionano_5856:HG2_Ill_manta_3354:HG2_Ill_SpiralSDKrefine_2463:HG2_Ill_SVrefine2DISCOVARplusDovetail_1912:HG2_Ill_Krunchall_16357:HG2_Ill_GATKHC_19263:HG2_Ill_GATKHCSBGrefine_8093:HG2_Ill_250bpfermikitraw_16024:HG2_Ill_150bpfermikitraw_15091:HG2_10X_SVrefine210Xhap12_8456:HG4_PB_SVrefine2PBcRDovetail_6060:HG4_Ill_svaba_15030:HG4_Ill_manta_2848:HG4_Ill_SVrefine2DISCOVARDovetail_8560:HG4_Ill_Krunchall_16609:HG4_Ill_GATKHC_19244:HG4_Ill_GATKHCSBGrefine_8301:HG3_Ill_svaba_15154:HG2_Ill_svaba_14995:HG2_Ill_breakscan11_4251;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8456:HG2_Ill_150bpfermikitraw_15091:HG2_Ill_250bpfermikitraw_16024:HG2_Ill_GATKHCSBGrefine_8093:HG2_Ill_GATKHC_19263:HG2_Ill_Krunchall_16357:HG2_Ill_SVrefine2DISCOVARplusDovetail_1912:HG2_Ill_SpiralSDKrefine_2463:HG2_Ill_manta_3354:HG2_PB_SVrefine2Falcon2Bionano_5856:HG2_PB_SVrefine2PB10Xhap12_8717:HG2_PB_SVrefine2PBcRplusDovetail_1658:HG2_PB_assemblyticsfalcon_3909:HG3_Ill_150bpfermikitraw_15108:HG3_Ill_250bpfermikitraw_15582:HG3_Ill_GATKHCSBGrefine_7981:HG3_Ill_GATKHC_19146:HG3_Ill_Krunchall_16048:HG3_Ill_SVrefine2DISCOVARDovetail_8775:HG3_Ill_Spiral_12511:HG3_Ill_manta_2737:HG3_PB_SVrefine2Falcon1Dovetail_7320:HG3_PB_SVrefine2PBcRDovetail_5650:HG4_Ill_150bpfermikitraw_15237:HG4_Ill_250bpfermikitraw_15869:HG4_PB_SVrefine2Falcon1Dovetail_7340;NumExactMatchSVs=26;ClusterMaxShiftDist=0.194805;ClusterMaxSizeDiff=0.194805;ClusterMaxEditDist=0.235294;PBcalls=14;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=76;DistBack=54673;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=11:10823577-10823582;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=819.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:./.:1:3:0:0:1/1:0:35:1:20:1/1:0:72:./.:.:.:.:.:.
chr11	11807843	HG4_Ill_250bpfermikitraw_15875	G	GTGTCCAAATTTCTCCTCCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTC	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_3916:HG4_PB_HySA_17483:HG3_PB_pbsv_11773:HG2_PB_HySA_21863:HG4_PB_pbsv_12064:HG2_Ill_breakscan11_4253:HG2_PB_pbsv_12095:HG4_Ill_svaba_15037:HG3_Ill_svaba_15158:HG3_Ill_GATKHC_19150:HG4_Ill_manta_2850:HG4_Ill_GATKHC_19252:HG4_Ill_GATKHCSBGrefine_8304:HG4_Ill_FB_10337:HG4_Ill_250bpfermikitraw_15875:HG4_Ill_150bpfermikitraw_15247:HG2_Ill_svaba_15000:HG2_Ill_SpiralSDKrefine_2468:HG2_Ill_Krunchall_16364:HG2_Ill_GATKHC_19270:HG2_Ill_GATKHCSBGrefine_8096:HG2_Ill_150bpfermikitraw_15097;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15097:HG2_Ill_GATKHCSBGrefine_8096:HG2_Ill_GATKHC_19270:HG2_Ill_Krunchall_16364:HG2_Ill_SpiralSDKrefine_2468:HG2_Ill_svaba_15000:HG4_Ill_150bpfermikitraw_15247:HG4_Ill_250bpfermikitraw_15875:HG4_Ill_FB_10337:HG4_Ill_GATKHCSBGrefine_8304:HG4_Ill_GATKHC_19252:HG4_Ill_manta_2850:HG4_Ill_svaba_15037;NumExactMatchSVs=13;ClusterMaxShiftDist=0.146789;ClusterMaxSizeDiff=0.12844;ClusterMaxEditDist=0.283186;PBcalls=6;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=3255;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=11:11807844-11807859;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=820.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:23:0|1:35:5:1:20:0|1:20:0:0:20:0/1:19:19:./.:.:.:.:.:.
chr11	12206628	HG3_PB_SVrefine2Falcon1Dovetail_7325	C	CTGGATGGGTGGGGGGATGGATAGGTGGGTGGGTGGGTGGGTGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGGGGGATGGGGGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7325:HG2_PB_HySA_21867:HG4_PB_SVrefine2PBcRDovetail_6065:HG2_PB_PB10Xdip_5092:HG2_PB_PB10Xdip_5091:HG3_PB_pbsv_11776:HG4_PB_SVrefine2Falcon1Dovetail_7347:HG4_PB_pbsv_12067:HG2_PB_pbsv_12099;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7325:HG4_PB_SVrefine2Falcon1Dovetail_7347;NumExactMatchSVs=2;ClusterMaxShiftDist=0.142132;ClusterMaxSizeDiff=0.13198;ClusterMaxEditDist=0.252632;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=95;DistBack=4730;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=157;REFWIDENED=11:12206629-12206785;PctSeqSimilarity=0.9617;PctSizeSimilarity=0.95;PctRecOverlap=0.5248;SizeDiff=-5;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=81;MatchId=821.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:41:1/1:2:18:0:27:./.:0:2:1:3:./.:0:0:./.:.:.:.:.:.
chr11	13023205	HG3_Ill_250bpfermikitraw_15595	G	GATCTGTCACTGCCTCCCATCACCCCCAGATGGAACCGTCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCACTGATTCTACATC	20	PASS	ClusterIDs=HG3_PB_HySA_18125:HG2_PB_pbsv_12103:HG4_Ill_GATKHC_19261:HG3_PB_pbsv_11779:HG4_Ill_GATKHCSBGrefine_8307:HG3_Ill_GATKHC_19160:HG3_Ill_GATKHCSBGrefine_7987:HG2_Ill_GATKHC_19280:HG2_Ill_GATKHCSBGrefine_8100:HG2_PB_HySA_21877:HG3_Ill_Spiral_12521:HG2_Ill_SpiralSDKrefine_2474:HG2_PB_PB10Xdip_5107:HG4_PB_pbsv_12069:HG4_Ill_Krunchall_16621:HG4_Ill_250bpfermikitraw_15883:HG4_Ill_150bpfermikitraw_15255:HG3_Ill_Krunchall_16065:HG3_Ill_250bpfermikitraw_15595:HG2_Ill_Krunchall_16375:HG2_Ill_250bpfermikitraw_16038:HG2_Ill_150bpfermikitraw_15106:HG4_PB_HySA_17490;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15106:HG2_Ill_250bpfermikitraw_16038:HG2_Ill_Krunchall_16375:HG3_Ill_250bpfermikitraw_15595:HG3_Ill_Krunchall_16065:HG4_Ill_150bpfermikitraw_15255:HG4_Ill_250bpfermikitraw_15883:HG4_Ill_Krunchall_16621;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0591716;ClusterMaxSizeDiff=0.0470588;ClusterMaxEditDist=0.258824;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=83;DistBack=6;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=11:13023206-13023207;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.988;PctRecOverlap=0.9759;SizeDiff=1;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=98;MatchId=822.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:0:29:0:23:1/1:0:8:1:6:1/1:0:38:./.:.:.:.:.:.
chr11	13037969	HG2_10X_SVrefine210Xhap12_8465	C	CCCCATTCCCACTCCCATTTCCCTCCTTGCTCTTATGATAGGCCCCTATTCCAATGTATTAATTTACAACCTTCCAAACCATCTTATATATTCAAGGCTGCCATGTTGCACACTGCGTGCTAGTCACACTCACACCTGGAGTGTAACTAGCACACAGTGTGCAACATGGCAGCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8465:HG2_PB_PB10Xdip_5108:HG3_PB_HySA_18126:HG3_PB_pbsv_11780:HG2_PB_pbsv_12104:HG2_Ill_MetaSV_758:HG4_PB_pbsv_12070:HG4_Ill_MetaSV_791:HG4_Ill_manta_2853:HG2_Ill_manta_3357:HG4_Ill_GATKHCSBGrefine_8308:HG3_Ill_MetaSV_757:HG3_Ill_GATKHCSBGrefine_7988:HG2_Ill_GATKHCSBGrefine_8101:HG2_PB_HySA_21878:HG4_PB_SVrefine2Falcon1Dovetail_7349:HG3_PB_SVrefine2Falcon1Dovetail_7327:HG4_PB_SVrefine2PBcRDovetail_6067:HG4_Ill_SVrefine2DISCOVARDovetail_8572:HG3_PB_SVrefine2PBcRDovetail_5655:HG3_Ill_SVrefine2DISCOVARDovetail_8790:HG2_PB_SVrefine2PBcRplusDovetail_1667:HG2_PB_SVrefine2PB10Xhap12_8727:HG2_PB_SVrefine2Falcon2Bionano_5863:HG2_PB_SVrefine2Falcon1plusDovetail_1755:HG2_Ill_SVrefine2DISCOVARplusDovetail_1919;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8465:HG4_PB_SVrefine2PBcRDovetail_6067:HG4_Ill_SVrefine2DISCOVARDovetail_8572:HG3_PB_SVrefine2PBcRDovetail_5655:HG3_Ill_SVrefine2DISCOVARDovetail_8790:HG2_PB_SVrefine2PBcRplusDovetail_1667:HG2_PB_SVrefine2PB10Xhap12_8727:HG2_PB_SVrefine2Falcon2Bionano_5863:HG2_PB_SVrefine2Falcon1plusDovetail_1755:HG2_Ill_SVrefine2DISCOVARplusDovetail_1919;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0730337;ClusterMaxSizeDiff=0.0670391;ClusterMaxEditDist=0.209366;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=173;DistBack=14759;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=109;REFWIDENED=11:13037970-13038078;PctSeqSimilarity=0.9827;PctSizeSimilarity=1;PctRecOverlap=0.5029;SizeDiff=0;StartDistance=-86;EndDistance=-86;GTMatch=0;TruScore=82;MatchId=823.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:1:24:1:20:./.:2:27:3:37:./.:1:15:./.:.:.:.:.:.
chr11	13092185	HG2_Ill_MetaSV_759	G	GATTAATGTAATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4254:HG2_PB_pbsv_12105:HG2_PB_assemblyticsfalcon_3934:HG2_PB_HySA_21880:HG3_PB_HySA_18128:HG2_PB_SVrefine2Falcon1plusDovetail_1756:HG2_Ill_MetaSV_759:HG2_PB_SVrefine2PBcRplusDovetail_1668:HG3_PB_SVrefine2Falcon1Dovetail_7328:HG2_PB_HySA_21879;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_MetaSV_759:HG2_PB_SVrefine2Falcon1plusDovetail_1756;NumExactMatchSVs=2;ClusterMaxShiftDist=0.129134;ClusterMaxSizeDiff=0.129134;ClusterMaxEditDist=0.203762;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=325;DistBack=-5;DistForward=-1;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:13092186-13092200;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=824.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:43:0|1:29:2:2:41:1|0:0:9:24:0:0/1:30:5:0/1:9:43:.:.:.
chr11	14500010	HG2_PB_SVrefine2Falcon1plusDovetail_1760	T	TCAGGAATGTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTGCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_21897:HG3_PB_pbsv_11788:HG4_PB_pbsv_12075:HG3_PB_SVrefine2Falcon1Dovetail_7332:HG2_PB_pbsv_12111:HG2_PB_SVrefine2Falcon2Bionano_5868:HG2_PB_SVrefine2Falcon1plusDovetail_1760:HG4_PB_SVrefine2Falcon1Dovetail_7354:HG4_PB_HySA_17500:HG2_Ill_breakscan11_4255;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1760;NumExactMatchSVs=1;ClusterMaxShiftDist=0.115854;ClusterMaxSizeDiff=0.115854;ClusterMaxEditDist=0.251445;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=11:14500011-14500027;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=825.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:0|1:25:0:0:25:1|0:0:6:13:0:0/1:27:13:0/1:8:40:.:.:.
chr11	15380244	HG2_Ill_breakscan11_4256	T	TGAAGAAGTAAATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGACTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATTCTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACTATGGAATACTATACAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGACTGTGGTGGGGTCGGGGGAGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7356:HG2_PB_HySA_21900:HG4_PB_pbsv_12078:HG2_PB_pbsv_12113:HG2_Ill_breakscan11_4256:HG2_PB_PB10Xdip_5261:HG2_PB_SVrefine2PB10Xhap12_8733:HG4_PB_HySA_17505:HG3_PB_SVrefine2Falcon1Dovetail_7333:HG2_PB_SVrefine2PBcRplusDovetail_1673:HG4_PB_SVrefine2PBcRDovetail_6071:HG2_PB_SVrefine2Falcon2Bionano_5869;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_breakscan11_4256;NumExactMatchSVs=1;ClusterMaxShiftDist=0.194098;ClusterMaxSizeDiff=0.194098;ClusterMaxEditDist=0.23082;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1572;DistBack=6766;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=11:15380245-15380244;PctSeqSimilarity=0.9978;PctSizeSimilarity=0.9994;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=826.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:40:./.:26:10:9:19:0|1:22:0:0:11:0/1:25:9:0/1:47:233:.:.:.
chr11	16605161	HG2_Ill_GATKHC_19315	C	CATATATATATATATATATATATACATATATATATATATATATACATATATATATATAT	20	PASS	ClusterIDs=HG2_PB_HySA_21910:HG2_PB_HySA_21911:HG3_Ill_svaba_15186:HG3_PB_pbsv_11794:HG3_Ill_Spiral_12548:HG3_Ill_GATKHC_19193:HG3_Ill_GATKHCSBGrefine_7998:HG4_PB_pbsv_12083:HG4_PB_HySA_17512:HG4_Ill_manta_2857:HG2_PB_pbsv_12119:HG2_Ill_scalpel_11380:HG2_Ill_GATKHC_19315:HG2_Ill_GATKHCSBGrefine_8112:HG2_Ill_150bpfermikitraw_15136;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15136:HG2_Ill_GATKHCSBGrefine_8112:HG2_Ill_GATKHC_19315:HG2_Ill_scalpel_11380:HG4_Ill_manta_2857;NumExactMatchSVs=5;ClusterMaxShiftDist=0.243902;ClusterMaxSizeDiff=0.243902;ClusterMaxEditDist=0.293103;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=7582;DistForward=7703;DistMin=7582;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=63;REFWIDENED=11:16605128-16605190;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=828.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:./.:10:24:17:3:./.:14:4:2:12:0/1:18:15:./.:.:.:.:.:.
chr11	17574078	HG2_PB_SVrefine2Falcon1plusDovetail_1772	C	CCCCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCTCCCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCCCTCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCTCCCACCTGTCCTGTGTCCCTCACCTGTACTGTGTCTCCCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCTCCCACCTGTCCTGTGTCTCCCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCCCCCACCTGTCCTGTGTCCCTCACCTGTCCTGTGTCTCCCACCTGTCCTGTGTCCCTCACCTGTCCTGTGTCT	10	PASS	ClusterIDs=HG3_PB_pbsv_11802:HG2_PB_SVrefine2Falcon1plusDovetail_1772:HG2_PB_pbsv_12128:HG4_PB_pbsv_12091:HG2_PB_HySA_21927:HG4_PB_SVrefine2Falcon1Dovetail_7365;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1772;NumExactMatchSVs=1;ClusterMaxShiftDist=0.142282;ClusterMaxSizeDiff=0.136913;ClusterMaxEditDist=0.258643;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=378;DistBack=48;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=84;REFWIDENED=11:17574079-17574162;PctSeqSimilarity=0.9987;PctSizeSimilarity=1;PctRecOverlap=0.9525;SizeDiff=0;StartDistance=-18;EndDistance=-18;GTMatch=0;TruScore=98;MatchId=829.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:39:./.:3:23:19:10:./.:9:2:0:14:0/1:3:7:0/1:3:17:.:.:.
chr11	18280215	HG2_PB_PB10Xdip_5277	CTG	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6080:HG4_PB_HySA_17534:HG2_PB_pbsv_12132:HG2_PB_HySA_21937:HG2_PB_SVrefine2PB10Xhap12_8748:HG2_PB_PB10Xdip_5277:HG4_PB_assemblyticsfalcon_3882:HG4_PB_SVrefine2Falcon1Dovetail_7367:HG2_PB_SVrefine2PBcRplusDovetail_1683:HG3_PB_SVrefine2Falcon1Dovetail_7343:HG2_PB_assemblyticsfalcon_3987:HG2_PB_SVrefine2Falcon1plusDovetail_1773:HG4_PB_pbsv_12095;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_5277:HG2_PB_SVrefine2PB10Xhap12_8748;NumExactMatchSVs=2;ClusterMaxShiftDist=0.129496;ClusterMaxSizeDiff=0.129496;ClusterMaxEditDist=0.24;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=275;DistBack=-3;DistForward=6016;DistMin=-3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:18280218-18280214;PctSeqSimilarity=0.9947;PctSizeSimilarity=0.9892;PctRecOverlap=0.9892;SizeDiff=-3;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=99;MatchId=830.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:51:0|1:20:6:1:38:0|1:20:0:0:5:0/1:25:7:./.:.:.:.:.:.
chr11	19640453	HG2_Ill_GATKHCSBGrefine_8120	C	CCTCCCCCCATCCCCTGACATCTGCCCACATTCTTATAACAAGCTCTCAAGTGTCCATCCACAAAAGCACATAGGCATTTCCACATACCTGAGTTCATATCCTGCTTCTGCCTCTTACTCACTGTGTGTTCTTAGGCAAATTACTTAACATCTCTGTGGCCTGCCTCTGATCCTAGGCTAAATATTCTTTACCTCACAGGAATATTGTAGGGCTCAAATGTGATCATTTAATTTTTTTGTGTTTTTCAAAATTTTGTTTGTTCTTTTTTTTTATACTTTAAGTTCTAGGGTACTTGTGCACACTGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTTGTCATTTCCATTAGGTATATCTCCTAATGCTATCCCTCCCCA	20	PASS	ClusterIDs=HG2_PB_pbsv_12134:HG2_PB_PB10Xdip_5302:HG4_PB_pbsv_12098:HG3_PB_pbsv_11807:HG3_PB_assemblyticsfalcon_3974:HG4_PB_assemblyticsfalcon_3889:HG3_PB_SVrefine2Falcon1Dovetail_7345:HG4_PB_SVrefine2Falcon1Dovetail_7370:HG2_PB_HySA_21950:HG2_PB_assemblyticsfalcon_3994:HG4_PB_HySA_17544:HG2_10X_SVrefine210Xhap12_8495:HG4_Ill_SVrefine2DISCOVARDovetail_8595:HG4_Ill_MetaSV_801:HG4_Ill_GATKHCSBGrefine_8330:HG3_Ill_SVrefine2DISCOVARDovetail_8811:HG3_Ill_MetaSV_774:HG3_Ill_GATKHCSBGrefine_8006:HG2_PB_SVrefine2PB10Xhap12_8751:HG2_Ill_SVrefine2DISCOVARplusDovetail_1944:HG2_Ill_MetaSV_770:HG2_Ill_GATKHCSBGrefine_8120:HG2_PB_SVrefine2Falcon1plusDovetail_1775:HG4_PB_SVrefine2PBcRDovetail_6082;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8120:HG2_Ill_MetaSV_770:HG2_Ill_SVrefine2DISCOVARplusDovetail_1944:HG2_PB_SVrefine2PB10Xhap12_8751:HG3_Ill_GATKHCSBGrefine_8006:HG3_Ill_MetaSV_774:HG3_Ill_SVrefine2DISCOVARDovetail_8811:HG4_Ill_GATKHCSBGrefine_8330:HG4_Ill_MetaSV_801:HG4_Ill_SVrefine2DISCOVARDovetail_8595;NumExactMatchSVs=10;ClusterMaxShiftDist=0.154791;ClusterMaxSizeDiff=0.154791;ClusterMaxEditDist=0.275534;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=404;DistBack=215012;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=11:19640454-19640472;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=831.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:0:24:1:35:1/1:0:12:0:12:1/1:0:23:1/1:3:69:.:.:.
chr11	19881503	HG2_PB_SVrefine2PB10Xhap12_8752	C	CCCTCACCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCTCCCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCCAACTCCCTCCTGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCCGGCGGGGGGCTGACCCCCCCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7371:HG2_PB_assemblyticsfalcon_3995:HG2_PB_SVrefine2Falcon1plusDovetail_1776:HG4_PB_pbsv_12099:HG2_PB_PB10Xdip_5325:HG3_PB_pbsv_11808:HG2_PB_pbsv_12135:HG4_PB_SVrefine2PBcRDovetail_6083:HG2_PB_SVrefine2PBcRplusDovetail_1686:HG2_PB_SVrefine2PB10Xhap12_8752:HG3_PB_SVrefine2Falcon1Dovetail_7346:HG2_PB_SVrefine2Falcon2Bionano_5880;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8752:HG2_PB_SVrefine2PBcRplusDovetail_1686;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0665189;ClusterMaxSizeDiff=0.0665189;ClusterMaxEditDist=0.226087;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=224;DistBack=41725;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=255;REFWIDENED=11:19881504-19881758;PctSeqSimilarity=0.9786;PctSizeSimilarity=0.9956;PctRecOverlap=0.4444;SizeDiff=-1;StartDistance=-125;EndDistance=-125;GTMatch=0;TruScore=80;MatchId=832.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:25:1:11:./.:0:0:0:0:./.:2:2:./.:.:.:.:.:.
chr11	19962993	HG4_Ill_GATKHCSBGrefine_8331	T	TAATAAATAGCATGAGGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAATAAAATAAATAAATAAATAAATA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_771:HG2_PB_pbsv_12136:HG4_PB_HySA_17548:HG4_PB_pbsv_12100:HG3_PB_SVrefine2Falcon1Dovetail_7347:HG2_PB_HySA_21954:HG4_PB_SVrefine2Falcon1Dovetail_7372:HG3_PB_assemblyticsfalcon_3978:HG4_PB_assemblyticsfalcon_3893:HG2_PB_assemblyticsfalcon_3998:HG4_Ill_MetaSV_802:HG4_Ill_GATKHCSBGrefine_8331:HG2_PB_SVrefine2Falcon1plusDovetail_1777:HG4_PB_SVrefine2PBcRDovetail_6084;NumClusterSVs=14;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_8331:HG4_Ill_MetaSV_802;NumExactMatchSVs=2;ClusterMaxShiftDist=0.231125;ClusterMaxSizeDiff=0.231125;ClusterMaxEditDist=0.292758;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=346;DistBack=5595;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=11:19962994-19963012;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9914;PctRecOverlap=0.9943;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=833.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:27:1|0:2:24:21:2:1|0:0:6:35:0:0/1:22:13:0/1:6:44:.:.:.
chr11	20254713	HG4_PB_assemblyticsfalcon_3897	C	CCCCGCCCCGTCCCGCCCCGTCCCGCTCTGCCCCGCCCCGCCCGCCCGCCCCGCCCCGCCCCGCCCGCCCGCCCCGCCCGCCCGCCCCGCCCCGCCTCGCCTCGCCTCG	10	PASS	ClusterIDs=HG3_PB_pbsv_11809:HG2_PB_PB10Xdip_5327:HG3_PB_assemblyticsfalcon_3984:HG4_PB_assemblyticsfalcon_3897:HG4_PB_SVrefine2Falcon1Dovetail_7374:HG2_PB_pbsv_12137:HG3_PB_SVrefine2Falcon1Dovetail_7348:HG2_PB_SVrefine2PBcRplusDovetail_1687:HG4_PB_pbsv_12102:HG4_PB_HySA_17553:HG2_PB_HySA_21959:HG2_PB_SVrefine2Falcon1plusDovetail_1778:HG3_PB_HySA_18184:HG4_PB_SVrefine2PBcRDovetail_6086:HG2_PB_SVrefine2PB10Xhap12_8753:HG2_PB_SVrefine2Falcon2Bionano_5881;NumClusterSVs=16;ExactMatchIDs=HG4_PB_assemblyticsfalcon_3897;NumExactMatchSVs=1;ClusterMaxShiftDist=0.131455;ClusterMaxSizeDiff=0.122066;ClusterMaxEditDist=0.2723;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=108;DistBack=17;DistForward=80874;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=11:20254714-20254715;PctSeqSimilarity=0.9585;PctSizeSimilarity=0.9391;PctRecOverlap=0.6957;SizeDiff=-7;StartDistance=32;EndDistance=32;GTMatch=1;TruScore=86;MatchId=834.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:43:1/1:1:21:2:18:./.:1:6:1:3:0/1:3:7:./.:.:.:.:.:.
chr11	21338970	HG3_Ill_GATKHCSBGrefine_8007	T	TTGCTATTTTGGTAAATAGCATTTTGGCAATATATGCTAAAGAGTACACACTTATTTGTGTACTCTTTAGCATATATTGCCAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4257:HG3_PB_pbsv_11813:HG2_PB_pbsv_12141:HG2_PB_HySA_21972:HG4_PB_SVrefine2PBcRDovetail_6089:HG4_PB_pbsv_12106:HG4_PB_SVrefine2Falcon1Dovetail_7377:HG4_PB_assemblyticsfalcon_3913:HG3_PB_assemblyticsfalcon_4000:HG2_PB_assemblyticsfalcon_4019:HG4_Ill_svaba_15113:HG4_Ill_manta_2863:HG4_Ill_SVrefine2DISCOVARDovetail_8601:HG4_Ill_Krunchall_16694:HG4_Ill_GATKHC_19345:HG4_Ill_GATKHCSBGrefine_8334:HG4_Ill_250bpfermikitraw_15952:HG4_Ill_150bpfermikitraw_15334:HG3_PB_SVrefine2Falcon1Dovetail_7353:HG3_Ill_svaba_15230:HG3_Ill_manta_2746:HG3_Ill_Spiral_12579:HG3_Ill_SVrefine2DISCOVARDovetail_8815:HG3_Ill_Krunchall_16138:HG3_Ill_GATKHC_19243:HG3_Ill_GATKHCSBGrefine_8007:HG3_Ill_250bpfermikitraw_15666:HG3_Ill_150bpfermikitraw_15192:HG2_PB_SVrefine2PBcRplusDovetail_1691:HG2_PB_SVrefine2PB10Xhap12_8758:HG2_PB_SVrefine2Falcon2Bionano_5883:HG2_PB_SVrefine2Falcon1plusDovetail_1782:HG2_Ill_svaba_15073:HG2_Ill_manta_3368:HG2_Ill_SpiralSDKrefine_2521:HG2_Ill_SVrefine2DISCOVARplusDovetail_1952:HG2_Ill_Krunchall_16456:HG2_Ill_GATKHC_19376:HG2_Ill_GATKHCSBGrefine_8122:HG2_Ill_250bpfermikitraw_16114:HG2_Ill_150bpfermikitraw_15185:HG2_10X_SVrefine210Xhap12_8500:HG4_PB_HySA_17567:HG2_PB_PB10Xdip_5350;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8500:HG2_Ill_150bpfermikitraw_15185:HG2_Ill_250bpfermikitraw_16114:HG2_Ill_GATKHCSBGrefine_8122:HG2_Ill_GATKHC_19376:HG2_Ill_Krunchall_16456:HG2_Ill_SVrefine2DISCOVARplusDovetail_1952:HG2_Ill_SpiralSDKrefine_2521:HG2_Ill_manta_3368:HG2_Ill_svaba_15073:HG2_PB_SVrefine2Falcon1plusDovetail_1782:HG2_PB_SVrefine2Falcon2Bionano_5883:HG2_PB_SVrefine2PB10Xhap12_8758:HG2_PB_SVrefine2PBcRplusDovetail_1691:HG3_Ill_150bpfermikitraw_15192:HG3_Ill_250bpfermikitraw_15666:HG3_Ill_GATKHCSBGrefine_8007:HG3_Ill_GATKHC_19243:HG3_Ill_Krunchall_16138:HG3_Ill_SVrefine2DISCOVARDovetail_8815:HG3_Ill_Spiral_12579:HG3_Ill_manta_2746:HG3_Ill_svaba_15230:HG3_PB_SVrefine2Falcon1Dovetail_7353:HG4_Ill_150bpfermikitraw_15334:HG4_Ill_250bpfermikitraw_15952:HG4_Ill_GATKHCSBGrefine_8334:HG4_Ill_GATKHC_19345:HG4_Ill_Krunchall_16694:HG4_Ill_SVrefine2DISCOVARDovetail_8601:HG4_Ill_manta_2863:HG4_Ill_svaba_15113:HG4_PB_SVrefine2Falcon1Dovetail_7377:HG4_PB_SVrefine2PBcRDovetail_6089;NumExactMatchSVs=34;ClusterMaxShiftDist=0.280702;ClusterMaxSizeDiff=0.280702;ClusterMaxEditDist=0.292683;PBcalls=16;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=84;DistBack=17892;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=11:21338971-21338978;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=835.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:29:0:26:./.:2:32:6:36:0/1:7:51:./.:.:.:.:.:.
chr11	22262800	HG3_Ill_Spiral_12588	G	GTGGGAATATACAACATTTGGTTTTCTGTTCTTGTATTAATTTGCTTAGGATAATGGCCTCCAGCTGTGTCAATGTTGTACAAAGGACATAATTTTATTCTTTTTGATGGTCGTGTAGTATTCCT	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_4026:HG2_PB_pbsv_12143:HG3_PB_assemblyticsfalcon_4009:HG3_PB_pbsv_11815:HG3_PB_SVrefine2Falcon1Dovetail_7354:HG4_PB_assemblyticsfalcon_3920:HG2_Ill_breakscan11_4258:HG4_PB_SVrefine2PBcRDovetail_6090:HG4_Ill_svaba_15126:HG4_Ill_manta_2866:HG4_Ill_SVrefine2DISCOVARDovetail_8605:HG4_Ill_MetaSV_803:HG4_Ill_GATKHCSBGrefine_8339:HG4_Ill_250bpfermikitraw_15968:HG4_Ill_150bpfermikitraw_15348:HG3_PB_SVrefine2PBcRDovetail_5672:HG3_Ill_svaba_15238:HG3_Ill_manta_2748:HG3_Ill_Spiral_12588:HG3_Ill_SVrefine2DISCOVARDovetail_8822:HG3_Ill_MetaSV_776:HG3_Ill_GATKHCSBGrefine_8011:HG2_PB_SVrefine2PBcRplusDovetail_1692:HG2_Ill_svaba_15083:HG2_Ill_manta_3370:HG2_Ill_SpiralSDKrefine_2530:HG2_Ill_SVrefine2DISCOVARplusDovetail_1956:HG2_Ill_MetaSV_773:HG2_Ill_GATKHCSBGrefine_8126:HG2_10X_SVrefine210Xhap12_8502:HG4_PB_SVrefine2Falcon1Dovetail_7378:HG4_PB_pbsv_12109:HG2_PB_SVrefine2Falcon1plusDovetail_1783;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8502:HG2_Ill_GATKHCSBGrefine_8126:HG2_Ill_MetaSV_773:HG2_Ill_SVrefine2DISCOVARplusDovetail_1956:HG2_Ill_SpiralSDKrefine_2530:HG2_Ill_manta_3370:HG2_Ill_svaba_15083:HG2_PB_SVrefine2PBcRplusDovetail_1692:HG3_Ill_GATKHCSBGrefine_8011:HG3_Ill_MetaSV_776:HG3_Ill_SVrefine2DISCOVARDovetail_8822:HG3_Ill_Spiral_12588:HG3_Ill_manta_2748:HG3_Ill_svaba_15238:HG3_PB_SVrefine2PBcRDovetail_5672:HG4_Ill_150bpfermikitraw_15348:HG4_Ill_250bpfermikitraw_15968:HG4_Ill_GATKHCSBGrefine_8339:HG4_Ill_MetaSV_803:HG4_Ill_SVrefine2DISCOVARDovetail_8605:HG4_Ill_manta_2866:HG4_Ill_svaba_15126:HG4_PB_SVrefine2PBcRDovetail_6090;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0632411;ClusterMaxEditDist=0.195313;PBcalls=12;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=124;DistBack=23138;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=11:22262801-22262803;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=836.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:0|1:28:1:1:31:1|0:2:53:27:1:0/1:20:18:./.:.:.:.:1239:.
chr11	22265277	HG2_Ill_MetaSV_774	A	ATTTTTGATTTCTGTAGGATTAGTTATAATATCATCATTGTCATTTCTCATTGGACTTATTTGGATCTCCTTTTTTTCTTTGTTAATATAGCTAGGGTGGTCTGTCTTATTTATTCTTTTGAAGAACCAATACTTGGTTTCATTGATCTTGTGTATAGATTTTTGCATCTCAGCTTAGTTCAATTCTTCTATAATTTTAGTTGTTTTTTTCTGCTAGCTGTGGAGTTAGTTTGTTCTTATTCTCTAGTTCCTCTAGGTGGAATTTTAGATTGGTATTTTGAGGTCTTTCTTACTACTTAATTGAGGCATATTAGAGCTATAAATTTTCCTCTTAGGACTGTGTTAACAGCATCCCAAAGATTTTGGTAAGTTGTATCCTATTTTTATTAATTTCAAATAATTGTTTGATTTGTGCCTTAATTTGGTTATATACACAGGAGTTATTCAGGAGCAAGTTGTTTAATTTCCATGTATTGGTACAGATTTGAGATATCTTGGTATTGATTTCCATTTTTAAAGCACTGTGGTCTCAGTGTGTGCTTGATATGATTTTGTCTTTTTTAATTTATTGAGACTTGCTTTATGTCTAAACACGTGATCTCTGAGAAGATGAGAATATATATTATGTGATTGGTTAGTGCTCTGTAGATGTCTATTAGGTCCAATTGGTCCAGTGTTGAGTTTAAGTCCAGAACTCTTTTGCTAGTTCTCTGCATCAGTGATCTGTCTAATGCTGTCAGTGGGATGCTGAAGTCTCCCACTACTATTATCTGGCTCTCTAAGTATTTTTATAGGTCAAGAAGGGCTTGTTTTATAAACATGGGTGCTTCATTGTTGGGTACATATATATTTAGGATAGTTAAGTCTTGTTGTTGAATTGAGCCCTTTATAATTACGTAATGGCCTGCTTTGCCCTTCTTAATTCTTGTTGGTTTAAAGTCTATTTCATCTGATAGAATAGAGACTCCTGTTGTTTTTGTTTTCCATTTGCATGGTAGATCTTTCTCCATCCCTTTACTTTGAACCTGTGAGTGTCATTAGACGTGAGACGGGTCTCTTAAAGACAGCGGACAGTTGGATCTTGTGTTTTTATCCAGCTTGCCACTCTATGTCTTTTACATGCAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5673:HG4_PB_pbsv_12110:HG3_PB_pbsv_11816:HG4_PB_HySA_17577:HG2_PB_pbsv_12144:HG2_PB_PB10Xdip_5352:HG2_10X_SVrefine210Xhap12_8503:HG4_Ill_SVrefine2DISCOVARDovetail_8606:HG4_Ill_MetaSV_804:HG2_PB_SVrefine2PB10Xhap12_8759:HG4_PB_SVrefine2PBcRDovetail_6091:HG3_Ill_SVrefine2DISCOVARDovetail_8823:HG3_Ill_MetaSV_777:HG2_PB_SVrefine2PBcRplusDovetail_1693:HG2_Ill_SVrefine2DISCOVARplusDovetail_1957:HG2_Ill_MetaSV_774:HG2_PB_SVrefine2Falcon1plusDovetail_1784:HG3_PB_SVrefine2Falcon1Dovetail_7355:HG4_PB_SVrefine2Falcon1Dovetail_7379;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_MetaSV_774:HG2_Ill_SVrefine2DISCOVARplusDovetail_1957:HG2_PB_SVrefine2PBcRplusDovetail_1693:HG3_Ill_MetaSV_777:HG3_Ill_SVrefine2DISCOVARDovetail_8823:HG4_PB_SVrefine2PBcRDovetail_6091;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0788346;ClusterMaxSizeDiff=0.075407;ClusterMaxEditDist=0.21106;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=1124;DistBack=2474;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=173;REFWIDENED=11:22265278-22265450;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=837.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:33:0|1:23:1:2:31:1|0:0:12:25:0:0/1:17:15:0/1:42:79:.:1239:.
chr11	22337777	HG4_Ill_GATKHC_19360	T	TCCCCGTGCCTCTCTCTCTCTCTCTCTCCCCTGTGCCTCTCTCTCTCCCCTGCCTGTCTCTCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_5353:HG2_PB_pbsv_12146:HG4_PB_assemblyticsfalcon_3924:HG4_Ill_GATKHC_19360:HG4_PB_pbsv_12112;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_GATKHC_19360:HG4_PB_assemblyticsfalcon_3924;NumExactMatchSVs=2;ClusterMaxShiftDist=0.151515;ClusterMaxSizeDiff=0.151515;ClusterMaxEditDist=0.240602;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=4;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=11:22337776-22337844;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=838.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:37:./.:17:22:4:2:./.:13:34:13:10:./.:1:0:./.:.:.:.:.:.
chr11	22454833	HG2_Ill_MetaSV_775	C	CCTGATGGATGGGGTGACCCACTACCGCGCCTATCTCCTCAAGTGCCACGAGCTGCCGTTTTATGGGTAAGAGCCACAGCCCCGCGGTCCCCCACCCCCTCCGCAGGCTGTTCTTGGGCTTTGCTAGCACAGCTGCCAGTGAGCCCACCTCTGCTCCAGCTGAGCTGTGTCCCCATGAAGTGGTGTCTTGTCACGAGCACCTCAGGCCCCACCGTTCCAAGCTGGGCACCTGTCCTCCCCTTCCTCCTGTCAGGGGCTGGGACACCTTGGATGGGTCCTCTCCTTCTACCTGGCACAGTCACCTCGTCACTGGCCCGGCCGACCTCGCCTTCAGCCAGCTGTCTCTGTCACGCAATTGTTGTCTAACAAACAGCT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_775:HG4_PB_pbsv_12115:HG2_PB_assemblyticsfalcon_4031:HG2_PB_SVrefine2Falcon1plusDovetail_1786:HG2_PB_pbsv_12147:HG2_PB_SVrefine2Falcon2Bionano_5885:HG2_Ill_SVrefine2DISCOVARplusDovetail_1958;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_MetaSV_775:HG2_Ill_SVrefine2DISCOVARplusDovetail_1958;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0501981;ClusterMaxSizeDiff=0.0343008;ClusterMaxEditDist=0.206806;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=374;DistBack=14093;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=11:22454834-22454850;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.984;PctRecOverlap=0.936;SizeDiff=6;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=97;MatchId=839.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:32:0|1:40:10:1:11:1|0:1:8:35:0:0/1:22:15:0/1:7:26:.:.:.
chr11	23038134	HG2_Ill_GATKHCSBGrefine_8134	C	CTGGAGTTGTTTCAAGGGGCTGATATTGTTGTAATACAAGCTGAAGATGGAACTTTTGGAGGCTGGAGGACACAAAGTTTACTATCAATTTAAATATACAGAACTGTAAAGTAACAGAACAGTGGCCACTCAGGGCCCCAACAGAGCAAAAAGGCTTTGTTTATTGCTTGCCAAATTTTACATTGATGGTAATAATTGGCATTAGGGTCTTTTGAGCCCTGATAGCTGTCTGTGATGGGACACAAATGGGTAGTGTTTGGAGTGCA	20	PASS	ClusterIDs=HG3_Ill_Spiral_12596:HG2_PB_pbsv_12152:HG3_PB_pbsv_11826:HG4_PB_assemblyticsfalcon_3933:HG4_PB_pbsv_12118:HG3_PB_assemblyticsfalcon_4024:HG2_PB_assemblyticsPBcR_3886:HG2_PB_assemblyticsfalcon_4041:HG2_PB_SVrefine2Falcon2Bionano_5889:HG2_PB_SVrefine2Falcon1plusDovetail_1790:HG2_PB_PB10Xdip_5356:HG2_PB_PB10Xdip_5355:HG2_Ill_breakscan11_4259:HG4_PB_HySA_17586:HG4_PB_SVrefine2PBcRDovetail_6097:HG4_PB_SVrefine2Falcon1Dovetail_7384:HG4_Ill_SVrefine2DISCOVARDovetail_8610:HG4_Ill_MetaSV_805:HG4_Ill_GATKHCSBGrefine_8349:HG3_PB_SVrefine2Falcon1Dovetail_7360:HG3_Ill_SVrefine2DISCOVARDovetail_8829:HG3_Ill_MetaSV_781:HG3_Ill_GATKHCSBGrefine_8022:HG2_PB_SVrefine2PBcRplusDovetail_1698:HG2_PB_SVrefine2PB10Xhap12_8766:HG2_Ill_SVrefine2DISCOVARplusDovetail_1966:HG2_Ill_MetaSV_777:HG2_Ill_GATKHCSBGrefine_8134:HG2_10X_SVrefine210Xhap12_8506:HG4_Ill_Spiral_964;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8506:HG2_Ill_GATKHCSBGrefine_8134:HG2_Ill_MetaSV_777:HG2_Ill_SVrefine2DISCOVARplusDovetail_1966:HG2_PB_SVrefine2PB10Xhap12_8766:HG2_PB_SVrefine2PBcRplusDovetail_1698:HG3_Ill_GATKHCSBGrefine_8022:HG3_Ill_MetaSV_781:HG3_Ill_SVrefine2DISCOVARDovetail_8829:HG3_PB_SVrefine2Falcon1Dovetail_7360:HG4_Ill_GATKHCSBGrefine_8349:HG4_Ill_MetaSV_805:HG4_Ill_SVrefine2DISCOVARDovetail_8610:HG4_PB_SVrefine2Falcon1Dovetail_7384:HG4_PB_SVrefine2PBcRDovetail_6097;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0519481;ClusterMaxSizeDiff=0.0482375;ClusterMaxEditDist=0.238971;PBcalls=17;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=265;DistBack=3760;DistForward=42973;DistMin=3760;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=11:23038135-23038137;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=840.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:35:1/1:4:19:0:14:1/1:0:18:0:21:1/1:0:25:./.:.:.:.:.:.
chr11	23113312	HG2_Ill_250bpfermikitraw_16142	C	CACATATATAATATATATACACACATATATATACACACACATACATATATATACACGTGT	20	PASS	ClusterIDs=HG4_PB_HySA_17588:HG2_PB_pbsv_12153:HG2_PB_PB10Xdip_5358:HG2_PB_PB10Xdip_5357:HG4_Ill_scalpel_11120:HG4_Ill_manta_2869:HG4_Ill_Krunchall_16722:HG4_Ill_GATKHC_19372:HG4_Ill_GATKHCSBGrefine_8350:HG4_Ill_250bpfermikitraw_15986:HG3_Ill_scalpel_11625:HG3_Ill_manta_2753:HG3_Ill_250bpfermikitraw_15691:HG2_Ill_scalpel_11433:HG2_Ill_manta_3373:HG2_Ill_Krunchall_16478:HG2_Ill_GATKHC_19403:HG2_Ill_GATKHCSBGrefine_8135:HG2_Ill_250bpfermikitraw_16142:HG2_Ill_150bpfermikitraw_15214:HG3_PB_HySA_18217;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15214:HG2_Ill_250bpfermikitraw_16142:HG2_Ill_GATKHCSBGrefine_8135:HG2_Ill_GATKHC_19403:HG2_Ill_Krunchall_16478:HG2_Ill_manta_3373:HG2_Ill_scalpel_11433:HG3_Ill_250bpfermikitraw_15691:HG3_Ill_manta_2753:HG3_Ill_scalpel_11625:HG4_Ill_250bpfermikitraw_15986:HG4_Ill_GATKHCSBGrefine_8350:HG4_Ill_GATKHC_19372:HG4_Ill_Krunchall_16722:HG4_Ill_manta_2869:HG4_Ill_scalpel_11120;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0847458;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.180328;PBcalls=5;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=11:23113311-23113314;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=841.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:49:1/1:0:20:4:27:./.:1:17:2:20:1/1:0:46:./.:.:.:.:.:.
chr11	23270710	HG2_PB_PB10Xdip_5359	GATG	GATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCAGGCTGGAGTGCAGTGGCGCATCTCGCTCACTGCAGCTCCGCCCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGCGCCCGCCACCTTGCCCGCTAATTTTTGTATTTTAGTAGAGACGGGGTTCACCGTGTTAGCCAGGATTGAT	20	PASS	ClusterIDs=HG4_PB_HySA_17589:HG4_PB_pbsv_12121:HG4_PB_SVrefine2Falcon1Dovetail_7385:HG4_PB_assemblyticsfalcon_3939:HG2_PB_HySA_21997:HG3_Ill_GATKHCSBGrefine_8026:HG2_PB_SVrefine2Falcon2Bionano_5890:HG2_PB_PB10Xdip_5360:HG2_PB_PB10Xdip_5359:HG2_PB_pbsv_12155:HG3_PB_pbsv_11829:HG2_PB_SVrefine2PB10Xhap12_8767:HG2_PB_assemblyticsPBcR_3892:HG2_PB_SVrefine2PBcRplusDovetail_1699:HG3_PB_HySA_18220;NumClusterSVs=15;ExactMatchIDs=HG2_PB_PB10Xdip_5359;NumExactMatchSVs=1;ClusterMaxShiftDist=0.250569;ClusterMaxSizeDiff=0.249433;ClusterMaxEditDist=0.348485;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=219;DistBack=1580;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:23270714-23270712;PctSeqSimilarity=0.9701;PctSizeSimilarity=0.9399;PctRecOverlap=0.9528;SizeDiff=-14;StartDistance=4;EndDistance=7;GTMatch=0;TruScore=95;MatchId=842.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:32:0|1:20:1:0:31:1|0:0:7:28:0:0/1:22:7:./.:.:.:.:.:.
chr11	23358503	HG3_Ill_GATKHCSBGrefine_8027	G	GAAAATACTTTTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_778:HG3_PB_assemblyticsfalcon_4030:HG3_PB_HySA_18221:HG3_PB_pbsv_11830:HG3_PB_SVrefine2Falcon1Dovetail_7361:HG2_PB_pbsv_12156:HG3_Ill_MetaSV_782:HG3_Ill_GATKHCSBGrefine_8027:HG2_Ill_GATKHCSBGrefine_8136:HG2_Ill_breakscan11_4260;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8136:HG3_Ill_GATKHCSBGrefine_8027:HG3_Ill_MetaSV_782;NumExactMatchSVs=3;ClusterMaxShiftDist=0.159875;ClusterMaxSizeDiff=0.159875;ClusterMaxEditDist=0.256489;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=40543;DistForward=10706;DistMin=10706;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:23358504-23358517;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=843.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:30:0|1:38:1:0:29:0|1:18:0:0:18:0/1:31:16:0/1:7:26:.:2958:.
chr11	23369210	HG2_PB_SVrefine2Falcon1plusDovetail_1791	G	GACTATAAATCTGAAATTCAAAATAAGATTAAATGGACCATGATCCAGGTTCTTAAACGTAAATTAGAGCATCTTTATAAAATAATTATCCTCAAAGAAATAAGCAAATATATGCATTCACGAGCATGAATCAATTGCTCTAAATATTTCCATAACACCAAACAGCCTGTGAAAATTGAAAAAATATATAATACAGAAATGAAAACCCAATACAAGTGTTGTAAAATTAGATTGAAAAAATATTCTAGAAAATAGAACAAAAAGATCAAGATATAGGAAATAGAAGCAAAGGAGAAAATTAAATGACCAGTCCAATAGATCCTCATAGATCAAAGCCCCACCTCTGTTCCCAACTGCCTCCCTACTTCCCCTTTTGGCTTTGTCCTTCTTGATATTACCAAGAAGAACTCCACGGAAACTTATCTTACCTTGTTCTCCTGCTGAGGACAACCACCACTGAGCAGAGATACATCAGGAAGAGTTGAGGAAATTGGATCTATATTCCTAGAGGTTCTGAATGCTCAACCTGGAACTGAAAGGAAACACATCCAAAATTGATGAAATTCAAAGATAGGCTAAATTATAATAATTTTTCAAGATTTTAGAGATTACATTGAGTTATAAAATTAAGTGAAAATAAACTTTAACATATATTCCAAGCTTACTTTTCTTCAATTTTAAATGTATCCTAATCAGGTGCTTTTAAAATGTTTATCTTTATTATTTACTGTAACATTCAGTAAGGTTGCCTGCTTTATCAGTCTATTATCTATCTGCCTATCTATGTATATACCTCTATTTATCTATCTATCATCTATTTAAAGGAGGGAATAACTTCTGCTGAATATCACAGAACATAATTTTGTCTCTTTTCTATTGGAATGTACACACCATAAGGGCAGGAAATTGTGTTTGTCCTCATCACCTTTATATATCCAGTACCTAGAATTGTATCCAGCACATATTTAGTAGTCAAAATACATTTTTATTACAAAACAATCCTGCAAGGCAAACATGGTACATTTGTTGATGATGAAGCAAATGCAGTAGGGCCTCTTAATTTGCTAAAGATTCAGAGCTAATAAGTACAACAATCTATTACCTTGGCTACTTTCTGTCTGGGTGCCTCCATAGATTTATTTTGAAACCAAGTTCAATTAAACTTAGCATTTCAAAAAATGATTTGATATGCAGAAGAAGAATCTATAAACAAATTAGAATCATTAACTTTCAAAAGCAGACCAACACTTTTATGGTATAACATAAGTGATGTAGATAAGCAACCTTTTTGAATACCCCAGATGCATTAAAGCTTTTAAAATTAGCAACTTCAATAGCTCAGAATTCTTTAACACAGATATTTTGGAAGATTTTAAAGAAAGCCTCTCACCAAACACTTGTCAGACGCATCTCCCAAATAATTTCAATTCATGATTTATTTTCATAATAGCTAAAATCACAGTAGTGTATCAAATTTCCATTGTAATTAATATGCATTTCATAGAGACTAATAAAATAGAGATATTGTCTGGCTTTCTAATACCTTTAACTGTCCCTCCAAATTTATCAGAAGTTTTCCCTTTTTATGGTAATTATGACTACTGATTCAAGAAGAGATTTCAGATGTCAATATTAAGTGTTCTGCCTTTGTGTGGCCATAGATTTTTAGAAGGATGTTTGCAGATATATTAGAATCCACATAGAATGACATATATCTATTTATATGATAATGTAATGCATTTGAGATTGCTACATGACTTCCTACTTCACTAAACATAAAAAATAAATATGCGGATAGTGCATTTGGCTGTTTTTGAAAAATTTGTGTTACTCTCAAAACTCTTAAGGAGTCACTCAAAAGCAGTTCATTTCTTACCTTCTAGTTGAAAGCAGTGACCTTGAGATAAAGTAAAGGTTAACTTAAAAAGGTTCACCAGCTGTGACTGCACTCAATAGCTTTCCATCTACTTCTTCTAAAGCTACACAAAACACAATACTAACACAATATATGTTTAAGCTCTTTGTAATGGTACCCAGGGGTACTCTTCTCCCAGAGCCCTTTCAATTTCACTTATTTCTCTTAGGCCTGGGAGCGGTGAGCAAATTGCCACAAGGCTAAAAATATCACCAATATATGCATGTCCACCCTTTTCAAAAACTCAGTAAAGGACATATCTTGGTAGTGAATTATTCCTTACTTCCCTCTGTATCCCACTTCTCAGAATAAATAGAGATATGAGACCTGTTTGCAATATTGCTGATGACTAAAAGTTCAGAACAGAACACCTCTTGAGGAAGTACTTGAGTCCTTGTGTCTATGCAATGATTTCAGTAGAGCCCCAAACAAAATTTCTCCAGATTTTCCCTTTCATTTTTCACTCTTATTCAAGTGAATTCTGTTTCTTCTTAAACCATTAAATAAATGTAAAGTGCTTTGAACAGATCCTAGCATGGAAAAACTGCTATGCAAATATTTGTTTCGATTCTGGACACTGCAGGCCCACACACAAACATATACTCACACAGTCACAGCCATGAACATGAATTTGCAGCTTATTTGTTCCTTTTTAGGTAAATACCTATTCTTTTATTAATCATTAATTTAATATGTTCAAGGTACCAATGCATGCCAAGAGATTCTCAGGTAAAGGCTTGCTGCATATAAATGTCCCATGTTTCTACACACTACTTAGACTAGTGTGTAGAGGGTTCATTGAAATTTTTTCGAATTATTCCTGTGCCCAAATATTTATCCCACTGTCTAACAAAAACAAACTTCCTATTTCCTGAGGATTACCTGCATTTTCTATAAGTCATATTGTGTTCTTACTGTTTTATCTATCATTCATATCTATCTTAATTTCTTTCCATCTTTCCCTTTAGTGACCAATTCAAAATTTAATTCGGTTATGATGATTTCTCCAATTATCTATTCAACCTGGCTCTGTTTGTAATGCTTCAGTTGCATTTTGATTTTGTTTTATGTCTATCTTTCTTTAAAAAAATAAATATTTTTGAGGTATAATTTACCTATCTAGAAATACTGACATTTTAAAACCACATAGTTTAGTGAGTTTTAACAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4261:HG2_PB_pbsv_12157:HG3_PB_pbsv_11831:HG2_PB_PB10Xdip_5361:HG2_PB_PB10Xdip_5362:HG4_PB_SVrefine2Falcon1Dovetail_7386:HG2_10X_SVrefine210Xhap12_8507:HG2_Ill_SVrefine2DISCOVARplusDovetail_1968:HG4_Ill_SVrefine2DISCOVARDovetail_8613:HG4_PB_SVrefine2PBcRDovetail_6098:HG3_PB_SVrefine2Falcon1Dovetail_7362:HG2_PB_SVrefine2PB10Xhap12_8768:HG2_PB_SVrefine2Falcon2Bionano_5891:HG2_PB_SVrefine2Falcon1plusDovetail_1791:HG3_Ill_SVrefine2DISCOVARDovetail_8831:HG2_PB_SVrefine2PBcRplusDovetail_1700:HG4_PB_HySA_17592;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1791:HG2_PB_SVrefine2Falcon2Bionano_5891:HG2_PB_SVrefine2PB10Xhap12_8768;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0522069;ClusterMaxSizeDiff=0.0509413;ClusterMaxEditDist=0.165741;PBcalls=12;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=3082;DistBack=10706;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=11:23369211-23369212;PctSeqSimilarity=0.999;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=844.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:97:1/1:0:41:0:35:1/1:0:22:0:19:1/1:0:47:1/1:7:278:.:2958:.
chr11	24347894	HG2_Ill_manta_3374	C	CGTATATATATACATATATGTATATATACGTATATATACACATATATGTATATATACGTATATATACACATATATGTATATATACGTATATATACACATATATGTATATATATACGTATATATATACATATATATGTGTATATACGTATATATATACATATATATGTATATATATACGTATATATATACATATATATGTATATATAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7388:HG2_PB_PB10Xdip_5364:HG2_PB_HySA_22004:HG4_Ill_GATKHC_19382:HG4_Ill_GATKHCSBGrefine_8355:HG3_Ill_GATKHC_19285:HG2_Ill_manta_3374:HG2_Ill_GATKHC_19413:HG2_Ill_GATKHCSBGrefine_8138:HG4_PB_pbsv_12126:HG3_PB_SVrefine2Falcon1Dovetail_7364:HG4_PB_HySA_17601:HG2_PB_SVrefine2Falcon1plusDovetail_1793:HG2_PB_pbsv_12159:HG4_Ill_SVrefine2DISCOVARDovetail_8617:HG3_PB_pbsv_11834:HG2_PB_SVrefine2PBcRplusDovetail_1702:HG2_PB_SVrefine2PB10Xhap12_8770:HG2_PB_SVrefine2Falcon2Bionano_5893:HG2_Ill_SVrefine2DISCOVARplusDovetail_1973:HG4_PB_SVrefine2PBcRDovetail_6101;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8138:HG2_Ill_GATKHC_19413:HG2_Ill_manta_3374:HG3_Ill_GATKHC_19285:HG4_Ill_GATKHCSBGrefine_8355:HG4_Ill_GATKHC_19382;NumExactMatchSVs=6;ClusterMaxShiftDist=0.20297;ClusterMaxSizeDiff=0.17734;ClusterMaxEditDist=0.321782;PBcalls=13;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=206;DistBack=-1;DistForward=6;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=237;REFWIDENED=11:24347753-24347989;PctSeqSimilarity=0.9763;PctSizeSimilarity=0.9626;PctRecOverlap=0.9628;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=845.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:1/1:2:20:1:16:./.:1:8:2:6:1/1:2:30:./.:.:.:.:.:.
chr11	24393043	HG4_Ill_SVrefine2DISCOVARDovetail_8618	A	AGTGATCCTCCCACCTCAGCTTCCTGAGTAGCAGGGATTACAGATGTGTGCCACCATGCCCAGCTAATTTTTGTATTTTAGTAGCAACTAATTTTTGTATTTTAGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGAAACGTAGTCTTTTTCTAATTCTGTGAAGAATGTAAATGATAGTTTAATGGGAATAACATTGAATATTTAAATTACTTTGGGAATTATGGCCTTTTCCACAATATTGATTCTTCCTATCCATGAGCATGGAATGTTTTTCCAATTGTTGGTTTCCACTGTGATTTCTGTGAGCAGTGGTTTGTAGTTCTCCTTGAAAACGTACTTTACTTCCCCCTTTCGCTGTATTCCTAGATATTTTATTTTCTTTGTAGCAATTGTGAATGGGAGTTTATTTATGATTTTGCTCTCTGCTTGTCTATTGTTGGTGTATAGAAATGCTTGTGATTCTTGCACATTGATTTTGTATCCTGAGACCTTGCTGAAGTTGCTTATCTGCTTAAGAAGCTTTTGGGCTAAGATGATGAGGTTTTCTAGATACAGAATTATGTCATCTGCAAACAGAGATACTTTGACTTCTCCTTCTATTTGAATTCCCCTGATTTCTTTCTCTTGCTTAATTGTTCTGGCCAGAACTTCCAATATTATACTGAATAGGAGTGAAGAGGGCATCTTTGTCTTGTGTTGATCTTTAAGGGGAATGCTTCCAGCTTTTACTCATTCAGTATGATATGGGCTATGGGTTTGTCATAAATGGCTCTTATTATTTTGAGGTATGTTCCATCAATACCTAGTTTATTGACAGTTTATAATATGAAGGGATGTTAAATTTCATTGAAGGCCTTTTCTGCCTCTACTGAGATAATCATGTGGTTTTTGTCTTTAGTTCTGTTTATGCGATTAATTACATTTATTGATTTGGGTATGCTGAACCAGCCTTGCATCCCAGGGATGAAGCCAACTTGATTGTGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTATTTTATTGAGGATTTTGCATCAATGTTCATCAGAGATATTGGCCTAAAGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTATCTCTGCCAAGTTTTGGTATCAGGATAATGTTGGCTTCATAAAGTGAGTTACAGAGGAGTCCCTCCGTTTCAATCATTTGAAATAATTTTAGAAGAAATGGTACTAGCTGTTTCTTGAAACTCTGGTAGAATTCAACTGTAAATTTGTCTAGTTCTGGGCTTTTTTTAGTTGGCAGGCTATTACTGCCTCAATTTCAGAACTTGCTACTCATTTATTCAGGGATTCAACTTCTTCCTGGTTCAGTCAAGGAAAGGTGTAGTGTCCAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTGTTTGCATAAAGGTGTTAATAGTATTCTTTGATGGTTGTTTTTATTTCTCTGGAGTCAGTGGTGATATCCCCTTTATCATTTTTTCGTATCTATTTGATTCTTCTCTCTTTTCTTCTTTATTAATCTAGCTTGCAGTCTATTTTATTAATTGAAAAAAACAGCTCATGGATCCATTAATTTTTTTTATGTCTATCTCCTTCAGTTCCACTCTGATCTCAGTTATTTCTTGTCTTCTGCTAGCTTTGGGGTTTGCATGCCCTTGGTTTTCTAGTTCTTTTAGTTGTGATGTTAGGGTGTCAATTTCAGATCTTTCTGGCTTTTTGGTGTGAGCATTCAGTGGTACAAATTTCCCTCTTAACACTGCTTTAGCTGCATCCCGGAGATTCTGGTACATTGTCTCTTTGTTCTCATTGGTTTCAAAAAACTTACTGATTTCTGGCTTACTTTCATTATTTAACCAGGAGTCATTCAGGAGCAGGTTGTTCAATCTTCATGTAGTTGTGTTGTTTTGAGTGATTTTCTTAATCTTGAATTCTAATTTGATTATGCTGTGGTCTGAGAGACTGTTACAATTTCATTACTTTGCAATGCTGAGGAGTATTTAACTCCCAATTATGTGATCAATTGTGGAATAAGTGCCATGTGGCACTGAAGAGTTTTGTAGATATTGATCAGGTCCACTTGAACCAGAGCTGAGTTCAAGTCCTATATATCTTTGTTAATTTTCTGTCTTGATGATCTGTCTAATATTTAATGTAAGGTATTAAAGTCTCCCACTGTTACACTGTGGGAGTCTAAGTCTCTTTGCAGGTCTCTAAAAATTTGTTTTATGAATCTGTGTTTTCCTGTATTGGAGGCATATATATTTAGGAGAGTTAGCTCTTCTTGTTGAATTGAACCCTTTCCCATTAGGTAATGCCCTTCTTTGTCTTTTTTGATCTCTGTTGGTTTAAAGTCTGTTTTGTCAGAAACTAAGATTGCCACCCCTGCCTTTTTTCTGCTTTTCATTTGCTTGGTAAATATTCCTCCATCCCTTTATTTTGAGCCTATGTGTGTCTTTGCATGTGAGATGGGTCTCCTGAATACAGACACGGGTGGATCTTGACCCTTTATTCAATTTCTGAGTCTGTGTATTTTAATTGGGGCATTTAGCCCATTTACTTTTAAGGTTATATTGTTATGTGTGAATTTAAACCTGTCATCATGATGCTAGCTGGCTATTTTGCAGACTTGATGTAGTTGCTTTCTATTGGCATTGGTCTCTGTACTTCAGTATGTTTCTGTAGTGGCTGGTAATGGTTTTTCCTAATATTTAGTGCTTCCTTCAGGAGCTCTTTCAAGGAAGACCTGGTGGTGATAAATTCCCTTAGCATTTGCTTATCTCAAAAGGATTTTATTTCTCCCTCGCTTATGAATCTTAGTTTGGCTGAATATGAAATTCTGGGTTGGAAATTATTTTCTTCTTGAACGTTGAATATTGGCCCCAATCTTTTCTGTCTTATAGAGTTTCTGCTGAGTGGTCTACTCTTATGCTGATGGGCTTCACTTTGTAGGTAACCCTGACTTTCTTTTTGGCTGCATTTAACATTTTTTCCTTCATTTCAACCTTGGGGAATCTGATGATTATGTGTCTTGGGGTTGATCTTCCTATGGAATATCTTACTGGCATTCTCTGGATTTTCTGAATTTGCATGTTGGCCTATCTTGCTAGGTTGGGGAGTTCTGGATGATATCCTGAAGTATGTTTTCCCGTTTGATTGCATTCTCCCCATCTCTTTCAGTTACTCTAATCAGTCATAGGTTCAGTCTTTTTACATAATCCCAAGTTCTCAGAGGTTTTGTTTGTTCCTTTGCATTTGTTTTTCTCTAATCTTCTTGGCCTGTCTAATTTCAGCAAGATAGTCTTCAAGTTTTCAAATTCTATTCTCTACTTTGTCTACTCAGCTATTGATACTTGTGGTTGAATTGTAAAGTTCTCATGTTGTGTTTTTCATCTCCATTGTCTCACTTATGTTCCTAAACTGGATTTTCTGGTTAACAATTCTAGTAATGTTTTATCTTAGTTCTTAGTTTCTTTACATTTGGTTAGAAGATGCTCCTTTAGCTCAGTTAAGTTCATTATTACCCAACTTTGAAATCTATTTCTGTCAGTTCATCCATCTCGGCCTCATCCCAGTTCTGTGCCCTTGCTAGAGAGGTGTTGTAATCATTTGGAAGAGAAGAGGCACTCTGGCTTTTTGTTTTCGGCATTTTATTGTTGATTTTTTCTGATTTTTGTGAATTTATCTAGCCTTAATCTTTGAGGATGTTGACTTTGAATGGGGTTTCACGGGGACTTTTTTGTTGATGCTGTTGTTGTTACTTTCTGTTTGTTTCTCTTTTAACAGTCACTCCCTCTTCTGTAGAGCTGCTGCAGTTTGCTGGGGGTCCACTCAAGACCCTATTTACCTTGGTCCCTCCCACACCTGCAGGTGTCACCGTTGGAGGCTGCAGAATAGTAAATGTGGCTGCTTGCCCCTTCCTCTGGGAGCTCTATCCCCAAGGGGCACCAACCTGATGCCAGTGGGAATGCTCCTGTATAAAGTGTCTGGAGACCCCTTTTGGGGGTCTTACCCAGTCAGGAGGCACTGGATCAGGGACCCACTTAATGAAGCACTCTGGCTGCTCCATGACAGGAGGGGTGTGCTGTGCTGGTGGGGAATGCCACTGGTCAGGACTGCCCAGATTCCTCAGAGCCAGCAGGGGGAAAGACTAAGTCTGCTGATCTGCAGAGACCATGGCTGCTCCTCCCCCAAGGGGCTCTGTCCCTGGGAAATCAGAGTTCCCTTCATAAACCCCTAGCTCTAGGGAGTTGTTGAAATTCCTATAGGGAGGCCCCATGCAGTGAGTAGAGATGGGTCTAGGTCTGGCCTAAAGAGGCAGTCTGGCCATGATCTGCCACAGCTGCTGTGCTGTGCTGTGGGGAATTCCTCCTGAGCCCAAACTTCTCAATCTCCCTGGCACCAGCAGGGGAAAAATGGCAGACTGAAGCCGCAGTGATGGCAGCCAGTACTCTCCCCAGGAGCTCAGTCGTCTTAGGCATCAGGCAGCCGCAGTGATGGCTGCCACCCATTCCCTAGGGAGCTCAGTCATCTTACGCAGCAGGCAGCTGCAGTGATGGCAGCCACCTCTTCCGCTGGGAACTCAGTAGTCTCAAGCTGTCTCCAGCATAGCATCCACTGAGAATCTGCACAGCATAGTGTTTAGGACCCAAGGCCTTGGTGGCCTGGGCTCACGAGGGGATCTCCTGATCTGTGGGTTGCACAGATCCAAGGAAAAAGCATGGTTTCCCAAGCGGGGTAGCACAATCACTCACTGTCTCCCTTGGCTGGGTGGGAGCTCCTCTTGCCCCACGCAACTCCGGGGTGGGCTTTTGTGCCACCCAGCTTTTCCTCTCTCTCCGGGGATCGCACCAATGGCCTAGTCAGGCCCAGTGAGAGAACCTGGATACCTCAGTTGCCAGTGCAGGATTCTCTCACTGTTTTCATTCTTCTCAGTGGGAGCCTCTGACCATAGCTGTTTCTGGTCAGCCATCTTGGCCAAGTCCAACCATAATTTGAATTTTTGATGAGTTAGGCATTTTAATCATATGCTCTAAAGATGGTAGAAGGAGTGGATTTTTAAACAATGAGACACCACTCTTGAAGAGTGGTTTCAAGATTGTAATGAAATAATAAAAGCAACAAACTTAGCACAGGTCCTGGAGAAGATGGTAAGTAATGAACAATTGTAGCCTTAGATCCAACTACTTTAACTTATACAGGAGGATTCTGTGTTTCTATAACTAGGGCAGCTGCTCTCAATTGTCTATGATACAATTAGATTGACCTGAAATCTTGCAAAAAACAAACAAACAAAAAAAAATGAGACAGCCTGGGTAGATGACCAGCAGCCAAATTCAAAATATTTTATTTCCTGTTTAATTCACAGCAAATCTCATGATATGATAAAAATTGTGTCTGCTTATTTAAAAAAAGATATGATTAAACTTTATTGTAAGTATATAATTATAATATTTAATTTTTGAGGGGAGAAAGGGAATTAGATCCTAAAGAAAGCTGGAAACACTGTAAAATGCCTCTATCAAAAGGGTCTTGCAAAATTCCCATGTTGATTGTTCTCTAAGCTGTTAATTTTGTAGCTTAATCTAGCTCTGTGTACATGTGTGTCAATTCCCCCAAATGTCTCTTGCTACTAAAATTGTTACAAATATGCTGCTGCAATTTAACAGACAGAACATGTTGTTTTGATTATAAATTTACATAATTTATTTTTATAGTTTAATCAGTCCATGATCTAAACATTGTTTCACACCCAATACTTCAAATAGGCAAGGTATCATAGCATTTAGAGTGCTACATCTGGAGGCAGACAAACCTTGCGTTCTCTAATTCAGGCAACGCAGGTAATCCTAACACAGCCTTCCTTTCTAGGAACTATTACCAAAATGTTTGCCTTCTTGATTTATCAGGGTTGAAGGTAGTCTCAGTTCCTGTTTTAATTTTTTTCAGATGTGTGTCAGTCATCAGTTCTTGTGAGTCTCATTGTAGGAAACACATTTTACATATCTGATCATATGAACTCCTTACTCCTTTAAGTCTTGTCACTAAACTTGGGGCCAGAAGGCAGCTCCTTTATGACTCTTTCTCTTTAGAGACTTACAGCACAAAAGCAGCTTTCTAAATAAATCTCTCACTACTATCCTTCTCTTCTGTCTTAATCCATTAATGTTGTAGAAGTCGATCAAAGAATTCAAGTGGTACAAAACAGATACCTCTTCATTCTCTTTATGAAATATATATAGAGTCAGAGATTCATTGTTTTACTTTCACTTTTACATTCATAAAAAATTCAAAATGGTGGCCAGAATACTGTTCTAACATATTATCGGAGGGTTTGAAATTAAATTCAATCCCTTCAGTAGTTCTTTTGTAATATGTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTTTCCTGCCTCAGACTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTC	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_8839:HG2_PB_pbsv_12160:HG4_PB_pbsv_12127:HG3_PB_HySA_18229:HG3_PB_pbsv_11837:HG2_Ill_breakscan11_4262:HG2_PB_PB10Xdip_5366:HG2_PB_PB10Xdip_5365:HG3_PB_SVrefine2Falcon1Dovetail_7365:HG2_PB_SVrefine2PB10Xhap12_8771:HG2_PB_SVrefine2Falcon2Bionano_5894:HG4_PB_SVrefine2PBcRDovetail_6102:HG4_Ill_SVrefine2DISCOVARDovetail_8618:HG2_PB_SVrefine2PBcRplusDovetail_1703:HG2_Ill_SVrefine2DISCOVARplusDovetail_1974:HG2_10X_SVrefine210Xhap12_8508:HG4_PB_SVrefine2Falcon1Dovetail_7389:HG2_PB_SVrefine2Falcon1plusDovetail_1794;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8508:HG2_Ill_SVrefine2DISCOVARplusDovetail_1974:HG2_PB_SVrefine2PBcRplusDovetail_1703:HG4_Ill_SVrefine2DISCOVARDovetail_8618:HG4_PB_SVrefine2PBcRDovetail_6102;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0476545;ClusterMaxSizeDiff=0.0473567;ClusterMaxEditDist=0.203417;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=6628;DistBack=43547;DistForward=62;DistMin=62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=63;REFWIDENED=11:24393044-24393106;PctSeqSimilarity=0.999;PctSizeSimilarity=1;PctRecOverlap=0.9916;SizeDiff=0;StartDistance=-56;EndDistance=-56;GTMatch=0;TruScore=99;MatchId=846.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:./.:0:0:0:1:./.:0:5:0:2:1/1:0:18:1/1:0:817:2592:6546:.
chr11	24792942	HG2_PB_SVrefine2PBcRplusDovetail_1707	T	TCTATTCATGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_22015:HG4_PB_pbsv_12131:HG2_PB_pbsv_12164:HG4_PB_assemblyticsfalcon_3957:HG2_PB_assemblyticsPBcR_3911:HG3_PB_assemblyticsfalcon_4049:HG2_PB_assemblyticsfalcon_4066:HG4_Ill_MetaSV_806:HG3_PB_HySA_18234:HG4_PB_HySA_17606:HG4_PB_SVrefine2Falcon1Dovetail_7391:HG4_PB_SVrefine2PBcRDovetail_6104:HG2_PB_SVrefine2PBcRplusDovetail_1707:HG2_PB_SVrefine2PB10Xhap12_8773:HG2_Ill_MetaSV_779:HG2_Ill_GATKHCSBGrefine_8140:HG2_10X_SVrefine210Xhap12_8510:HG3_PB_SVrefine2Falcon1Dovetail_7367:HG2_PB_SVrefine2Falcon1plusDovetail_1797:HG3_Ill_MetaSV_786:HG3_PB_pbsv_11840:HG2_PB_PB10Xdip_5370:HG2_PB_PB10Xdip_5369;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8510:HG2_Ill_GATKHCSBGrefine_8140:HG2_Ill_MetaSV_779:HG2_PB_SVrefine2PB10Xhap12_8773:HG2_PB_SVrefine2PBcRplusDovetail_1707:HG4_PB_SVrefine2PBcRDovetail_6104;NumExactMatchSVs=6;ClusterMaxShiftDist=0.304762;ClusterMaxSizeDiff=0.304762;ClusterMaxEditDist=0.320635;PBcalls=18;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=322;DistBack=6905;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=11:24792943-24792959;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=847.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:./.:2:30:2:6:./.:0:2:0:6:1/1:0:15:1/1:1:65:.:.:.
chr11	24940396	HG2_PB_SVrefine2PB10Xhap12_8774	T	TATATATGTTCTTTATATATATCCATAATATATATTATATATAGTTATATATAATATATATCCATAATATGTATTATATATAGTTATATATACTATATATCCATAATATGTATTATATATAGTTATATATACTATATATCCATAATATGTATTATATATAGTTATATATACTATATATCCATAATATGTATTAATATAGTTATATATACTATATATCCATAATATGTATTATATATAGTTATATATACTATATATCCATAATATGTATTATATATAGTTATATATACTATATATCCATAATATGTATTACATATAGTTATATATACTATATATCCATAATATGTATTATATATAGTTATATATACTATATATCCATAATATGTATTACATATAGTTATATATACTATATATCCATAATATGTATTATATATAGTTATATATACTATATATCCATAATATGTATTATATATAGTTATATATACTATATATCCATAATATGTATTATATATAGTTATATATATATATATCCATAATATGTATTATATATAGTTATATATACTATATATCCATAATATGTATTATATATAGTTATATATAATATATATCCATAATATGTATTATATATAGTTATATAAATATATCCATAATAGTATTATATATAGTTATATACAATATAGATTCATATGTATTATATATAGTTATATATATTTATTCATAATATTTATATGTAGTTATATATAATATTTATTCATAATATGTATTATATGTAGTTATATATAATATTTATTCATAATATATATTATATGTAGTTATATATAATATTTATTCATAATATATATCATATGTAGTTATATATATTTATTCATAATATATATCATATATAGTTATATATAATATTTATTCATAATATATATCATATGTAGTTATATATAATATTTATTCATAGTACATATTATATGTAGTTATATATAAAATTTATTCATAATATATCTTATATATAGCTATATATATTTATTCATAATATATCTTATATATAGCTATATATAATATTTATTCATAATATATATTATCTATAGTTAGATATAATATTCGTTCATAATATATAATATATAGTTATATAATATATATATAATATATATATTATAGTTAGTTATATAATATATATAAAATATATATATTATATATAGTTATATATAATATATATTCAGAAACTATATTATATATAGTTATATATTATATATTCAGAATATATATTATATATAGTTATATATAATATATAGATAATATATATTATAATAGTTATATATAATATATAGATAATATATATTATATATAGTTATATATAATATATATTGATAATATATATTATATATAGTTATATATAATATATTATATATAGTTATATATAATATATAATATATATATTATATATAGTTATATATATATATATTATATATAATATATATATATATTATATATATATATATTATATATATATATATAATATATATTATATATAGTTATATATAATATATATAATATATATTATATATAGTTATATATATATATATAATATATATTATATATAGTTATATATATATATAATATATATTATATATAGTTATATATAATATATAATAATATATTATATATAGTTATATATATATATTATATATAGTTATATATAATATATATAGATAATATATATTATATATAGTTATAATAATATATATAGATAATATATATTATATATAGTTATAATAATATATATTGATAATATATATTATATATAGTTATACATAATTATATTGATAATATATATTATATATAGTTATACATAATATATTGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATAATATATAGATAATATATGTTATATATAGTTATACATGATATATAGATAATATATGTTATATATAGTTATACATGATATATAGATAATATATGTTATATATAGTTATACATGATATATATATTGATAATATATATATATATTATATATAGTTATACATGATATATATTGATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8774:HG3_PB_pbsv_11841:HG2_PB_SVrefine2PB10Xhap12_8775:HG4_PB_pbsv_12133:HG4_PB_HySA_17610:HG2_PB_HySA_22020:HG3_PB_HySA_18240:HG4_PB_assemblyticsfalcon_3961:HG2_PB_assemblyticsfalcon_4069:HG2_PB_assemblyticsPBcR_3915:HG3_PB_assemblyticsfalcon_4053:HG2_PB_SVrefine2Falcon1plusDovetail_1798:HG2_PB_SVrefine2Falcon2Bionano_5896:HG4_PB_SVrefine2Falcon1Dovetail_7393:HG2_PB_SVrefine2PBcRplusDovetail_1708:HG3_PB_SVrefine2Falcon1Dovetail_7368;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8774;NumExactMatchSVs=1;ClusterMaxShiftDist=0.283144;ClusterMaxSizeDiff=0.283144;ClusterMaxEditDist=0.329336;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=2380;DistBack=21916;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=286;REFWIDENED=11:24940397-24940682;PctSeqSimilarity=0.9702;PctSizeSimilarity=0.9778;PctRecOverlap=0.8735;SizeDiff=-54;StartDistance=-281;EndDistance=-281;GTMatch=1;TruScore=94;MatchId=848.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:95:1/1:4:29:4:38:./.:0:0:0:0:./.:2:3:1/1:2:164:.:2414:.
chr11	25244524	HG3_PB_SVrefine2Falcon1Dovetail_7371	A	AAAGAACATGTCATGCAAAAGCCCCATTTTATTTCTCAGTAGCCAACTCTTTCCTCACCTTTGCTGTATTTTTATACGATAACTATAAATTGTGAGCACTTAATTGGTTCTGCAATCCTAACACCTTTATATTCAGGCCTTTGGACTACCAAGATATATCTTCTCTGTACCTGTAGAAAATAGGAGACTTTTAAAAACGTCCTATACAGACGTTTTTATTTTCCTCTTGTGTCTTGAGTTGGATAGTAAATATTTTATTTATCTTCTGTGTTGTGCACATTTTCTATTTTTTTAATAGAAGCCACACCCAATGCTACTTTTCTCTTAATGTCCATTTCCTCATTTCCCAGATCCTTGACCTCTACTCACACCACTTTTTATCCATGCCCAGGGAAAATGTGTATAATCATAGTGCCACCACAAACTGTGGTTTATCAGGGACTCAATTCATCTAGTAGGAAAGATACAAATGACCTCATCAATAATATGATCAACCCAACCCCAGGTTTCTATTTTTAAAATTTATTATTTAGATTACCTCCCAGAGCCAACTACTATATCAATTAGGATCCTCCTATCAAAAAATAGTTGTACACCCAAGAAAATAGTAGAAGAGAGCTTAATCAGGAGACTTGAGAACAGGAAGAAGACAAGGATGCTCACTCTTACCACTGGTATTCAACATAGTACTGGAAGTCTTAGCCAGAGCAATCAGGCAAGAGAAATAAATAAAGGTAACCAAATAGGAAGAGAGGAAGTCAAACTATCTCTTATGGCATGCAATATGATTCTATAACTAGAAAATCCCATACTCTCTCCTCAAAGTCTCCTGGAATTGATTTTTTTAAAACTTCAGTAAAATTTCAGGATACAAATTCAATGTACAAAAGCCAGTAGTGCCAATAACATCCAAGCTGAGAGCCAAATTAAGAATGCAATTCCATTTGTAATAGCCACAAAAAGAAATAAACTACCTAAGAATACAGCTAATAGGGAGGAGAAAAAGCTCTACAATGAAGATTAGAAAGCACTCCTGAAAAAAATCAAAGACAACAAGAACAAATGAAAAAACATTTCATGTTCATGAATACAAAGAATCAATGTTAAAATGGCCATACTGCTCAAAATGATTTACAGATCCCCTGTTATCCTATCAAATAAGCAATGGAATTTTTAATTTTTAAAATCAGAAAAAGCTATTCTAAAATGTATATAGAACCGAAAAAGAGCTCAAATAGCTAAAGCAAATCCTATTTAAAAAAAAAGCCAGAGGCATCACACTGCATGACTTCAAACCGTTTAAGGCTACAGTAACCAAAACAGCATCATACTGGTAAAAAAGCAGACACATAAACAAATGATACAAAACAGAGAGCTCAGAAATAATCCCACACGCCTACAATTATCTAATCTTCAACAAAGTCATTAATAAAATGCAATGGGAAAAGAATTCTCTATTCAATACATGGTGCTGGGATGACTGGCTAGCCATATGCAGAAGGTTGCATCTGGACACCTTCATTTTACCATATGCAAAAATCAACTCAAGATGGATTAATGGCTGAAATATATATACATAAAACTGTAAAAACCCTAGAAGAAAACCTAGGAATACCATTCTGGATACAGGCTTTGGCAAAGATTTCACGGCAAAACCTCCAAAAGCAATTACAACAAAACCAAAAATGGACAAGTGACATCTAATTAAACTAAAAAGATTCTGCACTGCAAAAGAAACTGTCAACAGAGTAAACAGACAACCTACAGAATGGGAGAAAATATTTGCAAACTATGCCTCTGACAAAGATCTAATATTCAGAGTATACAAGGAACATAGACAAATCAACAAGAAAAAAACAACCCTATTTAAAAATAGTCAAAGGACATAAACAGACCCTTCTCAAAAGAATATATACAAGTGGCCAACAAGAATGTGAAAAATTGCTCAACATCAGTAATCATAAGAGAAATACAAATCAAAACCACCTTGAGATACCATCTCACATCAGTCAGAATGGCTATTATAAAAAGTAAGAAAAAAAATGTTGGCCAGTTTGTGGGGAAAAAAAGAACATTTATACACTGCGGGTGGGGATTCAGATTAGTGAAGCTACTGTGGGAAAAGAAGTTAGGAGATTTCTGAAAGAGCTAAAAACAGAACTACCATCCAACCCAGCAATCTCATTACTGGGCATATGCTTGAAAGACTATAAAACATTCTACCAAAAACAAGCAAACAAATAGACAAAAAAAACCCACATGCACTTTAAGTTCATCGCAGCACTATTCACAATAGCAAAGACATGGCATCAACCTAGATACTCATCAATGTTGGACTCGATAAAGAAAATATGGTACATGTACACCCAGGAGTATATGAAGCCATAAAAAACTGAAGTAATGTCCTTCGCGGCATCATGGATGCAGCTGGAGGCCATTAACCTAAGCAAATTAACATAGGAACACAAAACAAAATACCAAACATGTTCTTACTAGTAAGTGGGGCTGAACACTGAGTACACATGGACACCACGGCCTACTTGAGTGGGGAAGGTGAGAGAAGAGTGAGAGTCAAAAAACTATCTACTGGTACTGTGCGCACTACCTGTGTGAGAAAAGTATTTGCACATCAAACCCCAAAGACATGCAATTTACTCATGTAGGAAACCTCCACATGTTCACTATGAACCTAAAATAAAAGTAGAAAAAAAAGACAATGATTCAAAAAATCATACAGCCTGCGTTCAGCATAGTCATCTTTCCCTCCAGCACATACAATTGTCCACCTGGCAATACTGACAAGAATGTGGCATCCTATGGATTTATGTTCTGAAGTTGCATATATAGACCCACACCTACTAAGCCTATTTGTTCTCAAACTCTGAAACTTAAAGTTGAGGTATCTCAACATGGATAAGGCGTTGCTGATCTGAAGTCTCACATGCACTCTGTACGAACAGCTTTGCTAGGTGGTAAGCAAGCTTTAGAGTCATTTAAATGGGAAAATATTTTGTTCTGTCTATCTCTTGAAAAGCAAATAGGCCACTTGGGCATTAAATTACATTAACTCACTAAATGTCATGGCTGTATTAACTACTGCCCAGGCAGCAAATTGGAAATATACCATCAGAGAGAAAGCTGTTTCTCTCAGTCACTTATTATGCCAGACTTTTTACTTTGCTATTACAGGATATAAAGGCATCATGATGGGGAAAAATTTGGAGACTAAGACACCTTGCCAAACACATTTTTTATTTGTTGTAGATCTTGATAACCTTGTAGGAATTTTTTGAAGGAAAAGTCAATGTTATTCTCAAAAGATTGTTTATTATAATTTTGGTAAGAATTCATAAGATCTACCCTTTAACAAACTTTTAAGTATATAATAAAGTATTGTATCGCATATTTAATGATGGACACTCTACACTCATTAAATAGCTACTCCTCATTTTTCTTTTTCTATCCAGACCCTGGCAAACACCATCCAGTCTTTGATTCTATGTATTTGAATATTTTCAATACCTAATATAAGTAGACTTGTACAGTATTTGTGTTTCTGTGACTGATTTACTTCACTTAACATAAGGACCTCAAGGTGCAGCCACGCTCCTGCATATTGCAAAATTTCTTCTTTTTAAAGGCTGAACACGCTTCCATTGTAGGTGTACACACATTTTTTAATCCACTTACCAGTTAACAGACCTTTAGATTCTTTCCATACATTGGTTAATGGAAATAGTGCTAAAGTGAAAACAGTAATGCTAATATCTGTTTGAGATTCTGTTTTTAATTATTTTAAATAAATCCCAAGAAGCAGGATTGTTCTATTTTTAGTAATTTGAGGATCATCAATATTGTTTTTCATAGTGGATGCATCATTTTGCATTTCTATCAACAGTGTGTAAGGGTTCCAAAATCTTTACCAACACTTGTCTTTAAAAAAAAAAAATTATTAGCTATTCTGACAATGTAAAGTGCTTTCTCACTGCAGTTTTGATTTGGATTTCTCTTATGATTATTGATGTCGAGTATATTTTTATATACCTGTTGATCATTTGTACATCTTCTGTGAAAAAAAAGTCTATTTAATTCCTTTACCCATGTTTTAAAATTTGGTTATTAGTTAGTATGCAATAGAGTTGTAGGAATTTTTTTACGCGTTTTAGAAATTAACCCGTAAGCAGATATGTTTTGCGAATATTTTTTCCCATTCTGTAGGTCACTTCTTCATGCTTTTTATTTTTTTCTTGATATGCAGCAGCTTTATAGCTTGATGCAGTCTCACTTGTATACATTGCTTTTTTTTTGCCTGTGTCTTTGGTATCATATTCATGAAATCATTGAAAAAACCAAAATGGGTTGAAAATTCTGGCAAATACGTTGCCGCAATATCGTTTGTGTTTGGCTATCTAGCTGAGATAATGAGTTCCAGTATTAATTCCTCTAGTAAAGGGCAGATTGCTCTCTCTCTCCAAACCCACACACCCAGTCATAGGGTCAGCCTGATTTGAAGATAAACCTCCTTGCAGTAAAGGTTTTTCATGTTCTTTGTTTCAAATTTTATGCCTTCTTGCTATAAACCGTGCAATTGCCACACTGCTCCTCTGACGCTTATGGACCTTAATGAAGGCAAGTGCCCCAAGTCTATGCTTCCTTCCTGCCCGAGCTCCCTGAGCTCCATGTGTCTGGCCTTCGGGCATGCTATGTACTCTCCAAGATCTATAAGTGATAAAATCTTTATTTCCATCTTGTGTCACTCTTAATCATTTAAGGGATACTCTTCATCTTAAAGCTCCTATATTAAAACACAATGTCAGAAAGCATTTTCCATATTTTTCTTCAAGGAGTTTTACAGTTTTATGTCTAAGGTGTAAGTCTTTGATCCATTTTGAGTTTATTTTTCTGTTCAGTTTCATACATTTGAATGTGGATATCCAGTTTTCATAGGACTACTTATTGAAAACAGTTTCCTTCTCCTATTGTGTGTTCTTGGTATCCTTGTAGTAGAACAACTGAAAGTATATGAATGGCTCTGTATACGTTCTATTAGTCTATATGTCCTCACTCTAGTACTAGACTGTTGTAAACACTATGGATTTTAAGATTTTTTTTATATTAGTAAGTCCGATGCCTCCAGCTCTGTTCTTCTTTCCCAAGAATGATTTGATTATTTGGTTTTGTTTTTTTTTTTGTGGTTGCATATGAGTTTAGAATTGGTTTTTCTATTTCCTTTTTAAAAAGGCATTAATGTTTTTATAGAAATTGCAAGAAATTTGTACATGACTTTGGGGAACATGGACATGTTTAACAATGTTACTCTTTCCAATCTATGAACAAAGATTTTTAAATTTGTTTTTGTGTTATTTAATCACCTTCATCAATGTTTGGTGGTTTTCAATGCACAAGTATTTCATCTCCTTAGCTAAATTTATTTCTATGTATTGAATTCTTTTTTGCTTTATTGTAAATGAGATCTTTTAAATTCCCTTTTCAGATAGTTGCTAGTGTATAGAAATGTAATTGATTTTTGCATGTTTATTTGATACTCTAAAAATGTGCTGTATTTGTTTGTTACATCTGCTTTTTAATGGAGTTTTTAGTGTTTTCTATATGTAAGATCAAGTCTTCTGCAAGCACTTTACTTCTTCTTTTGCAATTTGCCTTTTATTGTTTATTTTTCTTGCCTAACTGCTCTAGCTAAAACTTCCATGATTACATTTAATAGAGGTGGG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7371:HG4_PB_pbsv_12140:HG2_PB_PB10Xdip_5388:HG2_PB_pbsv_12171:HG2_PB_PB10Xdip_5389:HG4_PB_SVrefine2Falcon1Dovetail_7397:HG2_10X_SVrefine210Xhap12_8515:HG4_Ill_SVrefine2DISCOVARDovetail_8623:HG4_PB_SVrefine2PBcRDovetail_6108:HG2_PB_SVrefine2PB10Xhap12_8779:HG2_PB_SVrefine2Falcon2Bionano_5900:HG3_PB_pbsv_11845:HG2_PB_SVrefine2PBcRplusDovetail_1712:HG3_Ill_SVrefine2DISCOVARDovetail_8845:HG2_Ill_SVrefine2DISCOVARplusDovetail_1983:HG2_PB_SVrefine2Falcon1plusDovetail_1801;NumClusterSVs=16;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7371;NumExactMatchSVs=1;ClusterMaxShiftDist=0.189704;ClusterMaxSizeDiff=0.189069;ClusterMaxEditDist=0.352698;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=5731;DistBack=496;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=11:25244525-25244528;PctSeqSimilarity=0.9982;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=849.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:1/1:2:33:2:33:1/1:0:10:0:8:1/1:0:38:1/1:0:536:.:6408:.
chr11	25605123	HG3_Ill_GATKHCSBGrefine_8045	T	TAAAAGGAACTTAGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4263:HG4_PB_pbsv_12143:HG2_PB_pbsv_12174:HG3_PB_pbsv_11848:HG2_PB_HySA_22033:HG4_PB_assemblyticsfalcon_3976:HG2_PB_assemblyticsfalcon_4082:HG3_PB_assemblyticsfalcon_4070:HG4_PB_HySA_17620:HG3_Ill_MetaSV_789:HG4_PB_SVrefine2Falcon1Dovetail_7399:HG4_Ill_MetaSV_807:HG3_Ill_GATKHCSBGrefine_8045:HG3_PB_SVrefine2Falcon1Dovetail_7373:HG3_PB_HySA_18251:HG2_PB_SVrefine2Falcon1plusDovetail_1803;NumClusterSVs=16;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_8045:HG4_Ill_MetaSV_807;NumExactMatchSVs=2;ClusterMaxShiftDist=0.137195;ClusterMaxSizeDiff=0.137195;ClusterMaxEditDist=0.208211;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:25605124-25605138;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=850.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:37:1|0:3:38:19:1:0|1:18:0:0:9:0/1:29:7:0/1:7:27:.:.:.
chr11	25977805	HG4_PB_pbsv_12150	A	AAAGGCTAACTTTTTCATATAATATATATATGAAAGCTTTTCAATATATATATATATGAAAGGTTTTCATATTACTAATATTCATGAAAGGCTTATTTAGTATATATATATTG	20	PASS	ClusterIDs=HG2_PB_pbsv_12181:HG4_Ill_Krunchall_16772:HG4_PB_HySA_17637:HG2_PB_SVrefine2Falcon2Bionano_5904:HG4_PB_pbsv_12150:HG2_PB_HySA_22055;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_12150;NumExactMatchSVs=1;ClusterMaxShiftDist=0.101382;ClusterMaxSizeDiff=0.0829493;ClusterMaxEditDist=0.27027;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=112;DistBack=9;DistForward=8875;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=11:25977796-25977833;PctSeqSimilarity=0.9202;PctSizeSimilarity=0.9286;PctRecOverlap=0.8761;SizeDiff=8;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=90;MatchId=851.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:28:./.:17:6:1:21:./.:14:21:24:0:0/1:24:7:./.:.:.:.:.:.
chr11	26293273	HG3_PB_pbsv_11859	C	CCTTGGAGGCCCGAGCGGGTTGATCATGAAGGTCAGGAAGATCGAGACCAATGCTGGCTCACAAGGTGAAACCCGTCTCTCTATAAAAATAAACAAAAAATTAGCGGGCGCGGTGGCGGGCGCTGTAGTCCCAGCCTACTCGGGAGGCTGAGGCCAGGAGAATGGCGTGAACGCGGGAAGCGGAGCTTGCAGTGAGCCCGAGATTGCGGCCACTGGCAGTCCGCAGTCCGGCGCTGGGCGACAGAGCGAGAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACTTTGCTGT	10	PASS	ClusterIDs=HG2_PB_HySA_22062:HG3_PB_assemblyticsfalcon_4083:HG4_PB_assemblyticsfalcon_3990:HG3_PB_pbsv_11859:HG2_PB_pbsv_12183:HG2_PB_assemblyticsfalcon_4092:HG3_PB_HySA_18272:HG2_PB_assemblyticsPBcR_3945:HG2_PB_SVrefine2Falcon1plusDovetail_1808:HG2_PB_SVrefine2PBcRplusDovetail_1718;NumClusterSVs=10;ExactMatchIDs=HG3_PB_pbsv_11859;NumExactMatchSVs=1;ClusterMaxShiftDist=0.183639;ClusterMaxSizeDiff=0.183639;ClusterMaxEditDist=0.230384;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=318;DistBack=13;DistForward=11590;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=11:26293274-26293274;PctSeqSimilarity=0.9517;PctSizeSimilarity=0.9874;PctRecOverlap=0.9498;SizeDiff=4;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=96;MatchId=852.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:34:0|1:17:1:1:27:./.:28:0:0:1:0/1:27:9:0/1:7:10:.:.:.
chr11	26418538	HG3_PB_SVrefine2Falcon1Dovetail_7377	C	CAGACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTACACTGTTGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATTACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_791:HG2_PB_HySA_22066:HG4_PB_assemblyticsfalcon_3993:HG2_PB_pbsv_12186:HG2_PB_assemblyticsfalcon_4095:HG3_PB_assemblyticsfalcon_4086:HG4_PB_SVrefine2Falcon1Dovetail_7404:HG2_PB_HySA_22065:HG2_PB_SVrefine2Falcon1plusDovetail_1809:HG3_PB_SVrefine2Falcon1Dovetail_7377:HG3_PB_pbsv_11862:HG2_Ill_MetaSV_780;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7377;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0854392;ClusterMaxSizeDiff=0.0733496;ClusterMaxEditDist=0.236211;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=809;DistBack=-3;DistForward=13;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=853;REFWIDENED=11:26417689-26418541;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9878;PctRecOverlap=0.9878;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=853.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:54:22:./.:37:2:12:16:./.:25:0:1:11:0/1:21:8:0/1:22:97:.:.:.
chr11	27025231	HG2_PB_SVrefine2Falcon2Bionano_5910	G	GGATTCCATGTATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTAGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGC	10	PASS	ClusterIDs=HG3_PB_HySA_18285:HG3_PB_assemblyticsfalcon_4097:HG3_PB_pbsv_11866:HG2_PB_pbsv_12191:HG2_PB_SVrefine2Falcon1plusDovetail_1813:HG3_PB_SVrefine2Falcon1Dovetail_7382:HG2_PB_SVrefine2Falcon2Bionano_5910;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5910:HG3_PB_SVrefine2Falcon1Dovetail_7382;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0743243;ClusterMaxSizeDiff=0.0675676;ClusterMaxEditDist=0.152824;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=143;DistBack=2;DistForward=13;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=11:27025232-27025248;PctSeqSimilarity=0.9931;PctSizeSimilarity=0.9862;PctRecOverlap=0.9862;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=854.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:30:./.:9:25:32:4:0|1:28:0:0:11:0/1:26:6:./.:.:.:.:.:.
chr11	28816758	HG2_Ill_250bpfermikitraw_16227	T	TATAAATATATATAAATTATATATATAAATATATAATATAAATTATATATAA	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_16227:HG3_Ill_manta_2769:HG2_Ill_manta_3394:HG4_Ill_svaba_15215:HG3_Ill_svaba_15328:HG3_Ill_scalpel_11685:HG3_Ill_150bpfermikitraw_15296:HG2_Ill_svaba_15173;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16227:HG4_Ill_svaba_15215:HG3_Ill_svaba_15328:HG3_Ill_scalpel_11685:HG3_Ill_150bpfermikitraw_15296:HG2_Ill_svaba_15173;NumExactMatchSVs=6;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0192308;PBcalls=0;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=51;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=11:28816757-28816760;PctSeqSimilarity=0.9903;PctSizeSimilarity=0.9804;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=855.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:15:38:./.:11:10:3:18:./.:1:1:0:8:0/1:10:34:./.:.:.:.:.:.
chr11	28866276	HG2_PB_PB10Xdip_5406	C	CCTCTCCTTCATTCCTCCCTCCCTCCCCCTCCCTCTCCTTCCTCCCTCCCTCCCTCCCT	20	PASS	ClusterIDs=HG3_PB_pbsv_11873:HG2_PB_PB10Xdip_5407:HG2_PB_PB10Xdip_5406:HG4_Ill_GATKHC_19463:HG2_Ill_GATKHC_19501:HG2_PB_HySA_22093:HG3_PB_assemblyticsfalcon_4111:HG3_Ill_GATKHC_19361:HG2_Ill_GATKHC_19500:HG3_PB_HySA_18299;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_5406:HG2_PB_PB10Xdip_5407;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0967742;ClusterMaxSizeDiff=0.0967742;ClusterMaxEditDist=0.169231;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=15;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=11:28866275-28866278;PctSeqSimilarity=0.9618;PctSizeSimilarity=0.9206;PctRecOverlap=0.9048;SizeDiff=-5;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=92;MatchId=856.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:36:1/1:4:21:2:14:./.:1:20:3:21:./.:0:4:./.:.:.:.:.:.
chr11	30233149	HG2_Ill_250bpfermikitraw_16238	T	TTATATATATATGTGTATATATATATTATATATATATATGTGTATATATATATTATATATATGTG	20	PASS	ClusterIDs=HG3_PB_pbsv_11877:HG3_PB_HySA_18311:HG2_PB_pbsv_12201:HG2_Ill_breakscan11_4264:HG3_Ill_svaba_15336:HG3_Ill_manta_2771:HG3_Ill_Spiral_12671:HG3_Ill_Krunchall_16259:HG3_Ill_GATKHC_19372:HG3_Ill_GATKHCSBGrefine_8070:HG3_Ill_250bpfermikitraw_15787:HG3_Ill_150bpfermikitraw_15311:HG2_Ill_svaba_15180:HG2_Ill_SpiralSDKrefine_2598:HG2_Ill_Krunchall_16572:HG2_Ill_GATKHC_19513:HG2_Ill_GATKHCSBGrefine_8180:HG2_Ill_250bpfermikitraw_16238:HG2_Ill_150bpfermikitraw_15300:HG3_Ill_SVrefine2DISCOVARDovetail_8866:HG2_Ill_SVrefine2DISCOVARplusDovetail_2002:HG2_10X_SVrefine210Xhap12_8528;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15300:HG2_Ill_250bpfermikitraw_16238:HG2_Ill_GATKHCSBGrefine_8180:HG2_Ill_GATKHC_19513:HG2_Ill_Krunchall_16572:HG2_Ill_SpiralSDKrefine_2598:HG2_Ill_svaba_15180:HG3_Ill_150bpfermikitraw_15311:HG3_Ill_250bpfermikitraw_15787:HG3_Ill_GATKHCSBGrefine_8070:HG3_Ill_GATKHC_19372:HG3_Ill_Krunchall_16259:HG3_Ill_Spiral_12671:HG3_Ill_manta_2771:HG3_Ill_svaba_15336;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.207407;PBcalls=3;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=64;DistBack=0;DistForward=21;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=44;REFWIDENED=11:30233139-30233182;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=857.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:39:0|1:30:0:2:40:1|0:1:25:16:0:0/1:28:39:./.:.:.:.:.:.
chr11	30294200	HG4_Ill_150bpfermikitraw_15456	T	TGCAATTTCAGGATACTGAAGACAAAGAGAAGATCCCTCAAGCTGCCAAAAAGAAAAAAATGAGATTCCAAGTG	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_4124:HG3_PB_pbsv_11878:HG2_PB_pbsv_12202:HG4_PB_pbsv_12169:HG2_PB_HySA_22107:HG4_PB_HySA_17674:HG4_PB_SVrefine2PBcRDovetail_6122:HG4_PB_SVrefine2Falcon1Dovetail_7416:HG4_Ill_svaba_15228:HG4_Ill_manta_2887:HG4_Ill_SVrefine2DISCOVARDovetail_8643:HG4_Ill_Krunchall_16821:HG4_Ill_GATKHCSBGrefine_8409:HG4_Ill_Cortex_563:HG4_Ill_250bpfermikitraw_16084:HG4_Ill_150bpfermikitraw_15456:HG3_PB_SVrefine2Falcon1Dovetail_7389:HG3_Ill_svaba_15338:HG3_Ill_manta_2772:HG3_Ill_Spiral_12672:HG3_Ill_SVrefine2DISCOVARDovetail_8867:HG3_Ill_Krunchall_16260:HG3_Ill_GATKHC_19373:HG3_Ill_GATKHCSBGrefine_8071:HG3_Ill_Cortex_598:HG3_Ill_250bpfermikitraw_15789:HG3_Ill_150bpfermikitraw_15313:HG2_Ill_svaba_15182:HG2_Ill_manta_3396:HG2_Ill_SpiralSDKrefine_2600:HG2_Ill_SVrefine2DISCOVARplusDovetail_2003:HG2_Ill_Krunchall_16574:HG2_Ill_GATKHCSBGrefine_8181:HG2_Ill_Cortex_1339:HG2_Ill_250bpfermikitraw_16241:HG2_Ill_150bpfermikitraw_15303:HG2_10X_SVrefine210Xhap12_8529:HG2_Ill_breakscan11_4265:HG4_PB_assemblyticsfalcon_4034;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8529:HG2_Ill_150bpfermikitraw_15303:HG2_Ill_250bpfermikitraw_16241:HG2_Ill_Cortex_1339:HG2_Ill_GATKHCSBGrefine_8181:HG2_Ill_Krunchall_16574:HG2_Ill_SVrefine2DISCOVARplusDovetail_2003:HG2_Ill_SpiralSDKrefine_2600:HG2_Ill_manta_3396:HG2_Ill_svaba_15182:HG3_Ill_150bpfermikitraw_15313:HG3_Ill_250bpfermikitraw_15789:HG3_Ill_Cortex_598:HG3_Ill_GATKHCSBGrefine_8071:HG3_Ill_GATKHC_19373:HG3_Ill_Krunchall_16260:HG3_Ill_SVrefine2DISCOVARDovetail_8867:HG3_Ill_Spiral_12672:HG3_Ill_manta_2772:HG3_Ill_svaba_15338:HG3_PB_SVrefine2Falcon1Dovetail_7389:HG4_Ill_150bpfermikitraw_15456:HG4_Ill_250bpfermikitraw_16084:HG4_Ill_Cortex_563:HG4_Ill_GATKHCSBGrefine_8409:HG4_Ill_Krunchall_16821:HG4_Ill_SVrefine2DISCOVARDovetail_8643:HG4_Ill_manta_2887:HG4_Ill_svaba_15228:HG4_PB_SVrefine2Falcon1Dovetail_7416;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0805369;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.184211;PBcalls=10;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=73;DistBack=22766;DistForward=4597;DistMin=4597;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=11:30294201-30294202;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=858.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:20:0|1:19:1:1:26:1|0:0:41:26:0:0/1:21:21:./.:.:.:.:.:.
chr11	32388069	HG3_PB_assemblyticsfalcon_4141	GGGCAATTT	CTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1824:HG4_PB_assemblyticsfalcon_4047:HG2_PB_pbsv_12210:HG4_PB_pbsv_12176:HG3_PB_assemblyticsfalcon_4141:HG4_PB_HySA_17680:HG2_PB_SVrefine2Falcon2Bionano_5918:HG3_PB_SVrefine2Falcon1Dovetail_7393:HG2_PB_SVrefine2PBcRplusDovetail_1734:HG4_PB_SVrefine2Falcon1Dovetail_7421;NumClusterSVs=10;ExactMatchIDs=HG3_PB_assemblyticsfalcon_4141;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0913386;ClusterMaxSizeDiff=0.0913386;ClusterMaxEditDist=0.132283;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=298;DistBack=-2;DistForward=2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:32388078-32388068;PctSeqSimilarity=0.9824;PctSizeSimilarity=0.9401;PctRecOverlap=0.9685;SizeDiff=-19;StartDistance=0;EndDistance=8;GTMatch=0;TruScore=96;MatchId=860.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:16:0|1:40:1:0:13:./.:41:0:5:6:0/1:41:7:0/1:13:10:.:.:.
chr11	32434263	HG2_Ill_GATKHCSBGrefine_8188	T	TAAAAATCTAATTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4268:HG4_PB_pbsv_12178:HG4_PB_assemblyticsfalcon_4049:HG3_PB_assemblyticsfalcon_4143:HG2_PB_HySA_22119:HG4_PB_HySA_17681:HG4_Ill_MetaSV_808:HG2_Ill_MetaSV_781:HG2_PB_SVrefine2Falcon1plusDovetail_1825:HG4_Ill_GATKHCSBGrefine_8416:HG2_PB_SVrefine2Falcon2Bionano_5920:HG2_Ill_GATKHCSBGrefine_8188:HG4_PB_SVrefine2Falcon1Dovetail_7423:HG3_PB_SVrefine2Falcon1Dovetail_7395;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8188:HG2_PB_SVrefine2Falcon2Bionano_5920:HG4_Ill_GATKHCSBGrefine_8416;NumExactMatchSVs=3;ClusterMaxShiftDist=0.10802;ClusterMaxSizeDiff=0.10802;ClusterMaxEditDist=0.160656;PBcalls=9;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=311;DistBack=1624;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:32434264-32434278;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=861.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:0|1:39:3:0:30:0|1:18:0:0:7:0/1:19:13:0/1:8:26:.:.:.
chr11	32892044	HG2_PB_SVrefine2PB10Xhap12_8807	C	TAAGAATCTTATCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_801:HG3_PB_pbsv_11887:HG2_PB_pbsv_12217:HG4_PB_pbsv_12184:HG4_PB_assemblyticsfalcon_4055:HG2_PB_SVrefine2Falcon2Bionano_5923:HG3_PB_assemblyticsfalcon_4149:HG3_PB_SVrefine2Falcon1Dovetail_7399:HG4_PB_SVrefine2Falcon1Dovetail_7427:HG2_PB_SVrefine2PBcRplusDovetail_1737:HG2_PB_SVrefine2PB10Xhap12_8807:HG3_PB_SVrefine2PBcRDovetail_5678:HG2_10X_SVrefine210Xhap12_8536:HG2_PB_SVrefine2Falcon1plusDovetail_1828:HG3_Ill_GATKHCSBGrefine_8081:HG4_Ill_GATKHCSBGrefine_8425:HG2_Ill_GATKHCSBGrefine_8193:HG3_PB_HySA_18335:HG2_PB_HySA_22131:HG2_Ill_breakscan11_4269:HG2_Ill_MetaSV_782;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8807:HG2_PB_SVrefine2PBcRplusDovetail_1737;NumExactMatchSVs=2;ClusterMaxShiftDist=0.120664;ClusterMaxSizeDiff=0.120664;ClusterMaxEditDist=0.211161;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=333;DistBack=2082;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1056;REFWIDENED=11:32901622-32892058;PctSeqSimilarity=0.997;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=862.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:2:11:0:18:./.:2:8:0:7:1/1:0:14:1/1:3:63:.:.:.
chr11	33424726	HG2_PB_SVrefine2PB10Xhap12_8808	C	CACACACACAGACATACACAGACACACGCACCCACACATGCAGACACAGACACAAACACACATATGCAGACACACACACAGACACAGACACACACAGACACAGACACACACACACACACACACGCAGACACACAGACACGCAGACACAGATACACATACAGACATACACACAGGGACACACACAGAGACTCAGGGACACACACACACAGACACACAGACATAGACATATGCAGACACACACAGACACACACATGCAGACACAGACACACATGGACACACACATGCAGACACGCGGACAGACACACAGACACAGAGACACACACGCAGACAGAGACACAGACATACACAGAGACCCAGGG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2017:HG2_PB_pbsv_12218:HG3_PB_pbsv_11889:HG4_PB_HySA_17704:HG3_Ill_GATKHCSBGrefine_8083:HG2_Ill_GATKHCSBGrefine_8195:HG4_Ill_manta_2891:HG4_Ill_GATKHCSBGrefine_8428:HG2_PB_HySA_22135:HG3_PB_HySA_18342:HG3_Ill_manta_2774:HG2_Ill_manta_3402:HG3_Ill_MetaSV_802:HG2_Ill_MetaSV_783:HG4_PB_pbsv_12186:HG4_Ill_MetaSV_809:HG3_PB_SVrefine2PBcRDovetail_5679:HG3_Ill_SVrefine2DISCOVARDovetail_8878:HG2_PB_SVrefine2PBcRplusDovetail_1738:HG2_PB_SVrefine2PB10Xhap12_8808:HG2_PB_SVrefine2Falcon2Bionano_5924:HG3_PB_SVrefine2Falcon1Dovetail_7400:HG4_PB_SVrefine2Falcon1Dovetail_7428:HG4_PB_SVrefine2PBcRDovetail_6133:HG4_Ill_SVrefine2DISCOVARDovetail_8655:HG2_PB_SVrefine2Falcon1plusDovetail_1829;NumClusterSVs=26;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5924:HG2_PB_SVrefine2PB10Xhap12_8808:HG2_PB_SVrefine2PBcRplusDovetail_1738:HG3_Ill_SVrefine2DISCOVARDovetail_8878:HG3_PB_SVrefine2PBcRDovetail_5679;NumExactMatchSVs=5;ClusterMaxShiftDist=0.120482;ClusterMaxSizeDiff=0.120482;ClusterMaxEditDist=0.236364;PBcalls=14;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=358;DistBack=-323;DistForward=5308;DistMin=-323;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=446;REFWIDENED=11:33424727-33425172;PctSeqSimilarity=0.9695;PctSizeSimilarity=0.9804;PctRecOverlap=0.6546;SizeDiff=7;StartDistance=-120;EndDistance=-120;GTMatch=0;TruScore=86;MatchId=863.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:68:1/1:0:27:2:39:1/1:4:84:3:118:1/1:0:9:1/1:1:67:.:.:.
chr11	33670122	HG2_PB_SVrefine2Falcon2Bionano_5927	T	TTAAATACACTAGGCCATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGTGTTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTGAATTGATCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTGCTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAATTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAATACTTAGAGTATAATAAAAAAAATAAAAAATAAAAATAAATAAATAAATAAATAAATAAATAAAAATAAAAAAATAAATAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4270:HG3_PB_pbsv_11892:HG4_PB_pbsv_12189:HG2_PB_pbsv_12221:HG2_PB_SVrefine2PB10Xhap12_8810:HG3_PB_assemblyticsfalcon_4163:HG4_PB_HySA_17708:HG4_PB_SVrefine2Falcon1Dovetail_7431:HG3_PB_SVrefine2Falcon1Dovetail_7402:HG3_PB_SVrefine2PBcRDovetail_5681:HG4_PB_SVrefine2PBcRDovetail_6135:HG2_PB_SVrefine2PBcRplusDovetail_1741:HG2_PB_SVrefine2Falcon2Bionano_5927:HG2_PB_SVrefine2Falcon1plusDovetail_1832;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5927:HG2_PB_SVrefine2PBcRplusDovetail_1741:HG4_PB_SVrefine2PBcRDovetail_6135;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0856721;ClusterMaxSizeDiff=0.0856721;ClusterMaxEditDist=0.185017;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1670;DistBack=-1;DistForward=18684;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=11:33670123-33670138;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=864.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:42:0|1:33:0:0:35:0|1:23:0:0:8:0/1:32:25:0/1:62:233:.:1695:.
chr11	36308592	HG2_PB_SVrefine2PBcRplusDovetail_1749	C	CTATATATGTATACTACATACTATGTAATCATATAGTATGTATACTACATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATCTATGTAATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCATATAGTATGTATACTACATACTATGTATATCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1749:HG2_PB_PB10Xdip_5462:HG3_PB_SVrefine2PBcRDovetail_5689:HG4_PB_SVrefine2Falcon1Dovetail_7441:HG2_PB_SVrefine2PB10Xhap12_8819:HG3_PB_SVrefine2Falcon1Dovetail_7411:HG2_PB_SVrefine2Falcon2Bionano_5934:HG2_PB_SVrefine2Falcon1plusDovetail_1842;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_1749;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0949153;ClusterMaxSizeDiff=0.0949153;ClusterMaxEditDist=0.178531;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=855;DistBack=16855;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=398;REFWIDENED=11:36308593-36308990;PctSeqSimilarity=0.9467;PctSizeSimilarity=0.9896;PctRecOverlap=0.5896;SizeDiff=-9;StartDistance=-350;EndDistance=-350;GTMatch=1;TruScore=84;MatchId=865.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:95:1/1:1:28:1:33:./.:6:15:8:2:0/1:11:2:0/1:13:70:.:.:.
chr11	36331174	HG2_PB_HySA_22167	C	CATGATGGTGGTGGTGGTAGTGGGGATGATGAGTGGTTGGTTGGGGATGATGGTGGTGGTGGTAGTGGGATGGTGTGGTGGTGGTATTGGGGATGATGGTGGTGGTGGTATTGGGTGATGGTGTGGTGAGTGGGGATGAGGTGATTGGTGGTAATGGGATGGTGGTGGTGGTATTGGGGATGATGGTGGTGGTGGTAGTGGGATGGTAGGTGATGTAGTGGGATGGTGGTGGTATATGGGGATGATGGTGGTGGTATTGGGATGATGGTGGTGTGGCAGTGGGGATGTGGTGGTGGTGGTAGTGGGGATGGTGGTGTGGCATGGGTGATGGTGTGGTATTGGGATGATGGTGGTGTGGTATTGGGGATGATGCTGCTGGTGGTATTGGGATGATGGTGGTGGTGGTATTGGGATGATGCTGCTGGTGGTATTGGGATGATGGCGGTGGTGGTATTGGCATTGGTGGTGGTGGTAGTGAGCATGAGGTGGTGGTAGTATGGGGATGATGGTGGTGGTGGTATTGGGATGATGGTGGTGGTATGAGCATTGCTGGTGGTGGTGTAGTGGGTGATGATGGTCGGTGGTATGGGATGATGTGGTGGTGTATGGGATGAGTGGTGGTGGTAGTGAGCATGATGGTGGTGTGGTATTGGGATGATGGTGGTGGTGGTATTGATGATGATGGTGTGTAGTGGGGATGATGGTGGTGGTATTGGGGATGATGGTGGTGGTAGTGGGGATGATGGTGGTGGTGGTATTGGGGATGATGGTGGTGGTGGTAGTGAGCATGATGGTGGGTGTATTGGGGTGATGGTGGTGTGGTAGGGGATGATGGTGGTGGTGTAGTGGGGATGATGGTGGTGGTGGTATGGGGATGATGGTGGTGGTGGTGGGGATGATGTGTGGGGTGTATTGGGGATGATGGTGGTGGTGGTATTGGAGATGATGGTGGTGGTGGTAGTGGGATGATGGTGGTGGTGGTATGGGATGATGGGTGGTGATATGGGGATGATGGTGGTGGTGTAGTGGGGATGATGGTGGTGGTGGTAGTGGGGATGATGGTGGTGGTGGTATTGGGCATGATGGTGGTGGTGGTATTGGGGATGATGGTGGTGGTGGTGGGATGAGTGGTGGTAGTATTGGGGATGATGGTGGTGGTAGTAGTGGGATGATGGGTGGTGGTAGTGGGGATGATGGTGGTGGTGTATTGGATGATGGTGGTGGTAGTGGGGATGATGTGGTGTGGTATTGGGGAGATGGTAGTGGTGGTAGTGAGCATGAGGTGGTGGTGGTATTGGGAGATGATGGTGTGGTGGTAGTGGGGATGATGGTGGTGGTGGTAGTGGGGATGATGGTGGTGGTGGTAGTGGGATGATGTGGTGGTGGTAGTGGGATGATGGTGGTGGTGGTATTGGGGATGATGGTGGTGGTGGTATTGGAGATGATGGTGGTGGTGGTAGTGAGGATGATGGTGGTGGTGGTAGTGGGGATGATGGGTGGTGATATTGGGATGATGGTGGTGGTGGTAGTGGGGATGATGTGGTGTGGTAGTGGGGATGATGTGGTGGTGGTATTGGGGATGATGGTGGTGGTGGTATTGGGGATGATGGTGGTGGTGGTATTGGGGATGATGGTGGTGGTGTATGGGGATGCTGGTGGTGGTATTGGCGATGATGGTGGTGGTGGTATTGGGGATGATGTGGTGGTGGTATTGGGGATGATGGTGGTGGTGGTATTGGGGATGATGGGTGGTGGTAGTGGGGATGATGGTGTGGTGGTGGTATTGGGGATGATGGGTGGTGGTAGTGGGGATGATGGTGGTGGTGGTAGTGGGGATGATGATGGTGGTGTAGGGGATGATGGTAGTGGTGGTATGATGGTTGGTGGTGGTATTGGGGATGATGGTGGTGGTGGTATTGGAGATGATGGTGGTGGTGGTAGTGAGGATGATGGTGGTGGTGGTAGTGGGGATGATGGGTGGTGATATTGGGGATGATGGTGGTGGTGGTAGTGGGGATGATGGTGGTGGTGGTAGTGGGGATGATGGTGGTGGTGGTATTGGGATGATGGGTGGTGGTATTGGAGATGATGGTGGTGGTGGTAGTGAGG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7412:HG4_PB_pbsv_12203:HG4_PB_HySA_17726:HG3_PB_pbsv_11910:HG3_PB_HySA_18375:HG2_PB_HySA_22168:HG2_PB_HySA_22167:HG4_PB_assemblyticsfalcon_4088:HG2_PB_assemblyticsPBcR_4032:HG2_Ill_breakscan11_4273:HG3_PB_SVrefine2Falcon1Dovetail_7413:HG2_PB_PB10Xdip_5463:HG4_PB_assemblyticsfalcon_4087:HG2_PB_SVrefine2PB10Xhap12_8820:HG2_PB_SVrefine2PBcRplusDovetail_1750:HG2_PB_SVrefine2Falcon1plusDovetail_1843:HG4_PB_SVrefine2Falcon1Dovetail_7442:HG2_PB_SVrefine2Falcon2Bionano_5935;NumClusterSVs=18;ExactMatchIDs=HG2_PB_HySA_22167;NumExactMatchSVs=1;ClusterMaxShiftDist=0.372179;ClusterMaxSizeDiff=0.372179;ClusterMaxEditDist=0.383788;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=2108;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=49;REFWIDENED=11:36331161-36331209;PctSeqSimilarity=0.9667;PctSizeSimilarity=0.9495;PctRecOverlap=0.9496;SizeDiff=-112;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=95;MatchId=866.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:81:1/1:2:25:0:29:1/1:6:123:3:145:0/1:5:13:1/1:9:312:.:2512:.
chr11	37706286	HG4_PB_HySA_17758	A	AAAGGCATCCAGCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGACCGAGGCGGGCGGATCACGGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATATTAGCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAG	10	PASS	ClusterIDs=HG3_PB_pbsv_11920:HG3_PB_SVrefine2Falcon1Dovetail_7418:HG2_PB_HySA_22191:HG2_PB_pbsv_12244:HG3_PB_HySA_18392:HG4_PB_pbsv_12214:HG4_PB_HySA_17758:HG2_PB_PB10Xdip_5480:HG2_PB_SVrefine2PB10Xhap12_8825:HG3_PB_SVrefine2PBcRDovetail_5695:HG4_PB_assemblyticsfalcon_4096:HG4_PB_SVrefine2Falcon1Dovetail_7447:HG4_PB_SVrefine2PBcRDovetail_6149;NumClusterSVs=13;ExactMatchIDs=HG4_PB_HySA_17758;NumExactMatchSVs=1;ClusterMaxShiftDist=0.271451;ClusterMaxSizeDiff=0.271451;ClusterMaxEditDist=0.320251;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=320;DistBack=-8;DistForward=8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=11:37706271-37706296;PctSeqSimilarity=0.9408;PctSizeSimilarity=0.9143;PctRecOverlap=0.9145;SizeDiff=-30;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=92;MatchId=867.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:19:0|1:18:5:0:22:1|0:0:6:39:0:0/1:44:9:0/1:6:14:.:.:.
chr11	38801060	HG4_Ill_MetaSV_811	T	TAGAAAGTGGTTTATTGGCCGGGCGCGGTGGTTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_5491:HG3_PB_pbsv_11923:HG2_PB_pbsv_12250:HG2_PB_assemblyticsPBcR_4053:HG4_PB_assemblyticsfalcon_4105:HG3_PB_HySA_18401:HG2_Ill_breakscan11_4274:HG4_PB_HySA_17773:HG4_PB_SVrefine2Falcon1Dovetail_7450:HG4_PB_SVrefine2PBcRDovetail_6152:HG4_Ill_manta_2899:HG4_Ill_MetaSV_811:HG4_Ill_GATKHCSBGrefine_8450:HG2_10X_SVrefine210Xhap12_8554:HG2_PB_SVrefine2PBcRplusDovetail_1756:HG2_PB_SVrefine2PB10Xhap12_8829:HG2_PB_SVrefine2Falcon2Bionano_5943:HG2_PB_SVrefine2Falcon1plusDovetail_1850:HG3_PB_SVrefine2PBcRDovetail_5698:HG3_PB_SVrefine2Falcon1Dovetail_7423:HG3_Ill_MetaSV_813:HG2_PB_HySA_22207:HG2_PB_PB10Xdip_5490;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8554:HG4_Ill_GATKHCSBGrefine_8450:HG4_Ill_MetaSV_811:HG4_Ill_manta_2899;NumExactMatchSVs=4;ClusterMaxShiftDist=0.148837;ClusterMaxSizeDiff=0.148837;ClusterMaxEditDist=0.229457;PBcalls=17;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=316;DistBack=33203;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:38801061-38801075;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=868.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:41:0:14:./.:0:1:0:7:1/1:0:22:1/1:2:61:.:1702:.
chr11	39001769	HG4_Ill_GATKHCSBGrefine_8451	A	ATGGTATAGTATAAATCACGTTTAACTCTAATATGAAAATTAAAAGGAAAAGGTATTAAAAATAACTATTGCTACCACAACTTGTTAGTGAATACACAACGTGCACCTGTAATCCCAGCTATTTGGGAGTCTGAGGCAGAAGAATGGGTCGAACCAAGAGGTGGAGTTTGCAGTGAGCCCAGATCACTGCCACTGCACTCCAGCCTCAGCAACAGAATGAGACTCTGTCTCAAAAAAAAAAAAAAAAGTGTGAATTATGACATTAAAAACGTAAAAGGTGGCCAGGCGCGGCGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCAGAGGAGGGCGGATCACAATGTCAGGGGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCCACTAAAAATACAAAAAATCAGCCGGGCGTGGTGGCGGGCGCCTTTAGTCCCAGGTTCTGAGGAAGCTGAGGTAGGGGAATGGCGTGAACCCATGGGGCAGAGCTTG	20	PASS	ClusterIDs=HG2_PB_pbsv_12252:HG4_PB_HySA_17776:HG4_PB_pbsv_12222:HG4_Ill_Spiral_977:HG3_Ill_Spiral_12727:HG2_PB_PB10Xdip_5495:HG2_PB_PB10Xdip_5494:HG2_Ill_Spiral_841:HG3_PB_SVrefine2PBcRDovetail_5700:HG3_Ill_SVrefine2DISCOVARDovetail_8901:HG2_PB_SVrefine2PBcRplusDovetail_1758:HG2_PB_SVrefine2PB10Xhap12_8831:HG2_Ill_SVrefine2DISCOVARplusDovetail_2042:HG2_PB_SVrefine2Falcon1plusDovetail_1852:HG4_PB_assemblyticsfalcon_4109:HG4_PB_SVrefine2PBcRDovetail_6154:HG4_PB_SVrefine2Falcon1Dovetail_7452:HG4_Ill_manta_2901:HG4_Ill_SVrefine2DISCOVARDovetail_8674:HG4_Ill_MetaSV_813:HG4_Ill_GATKHCSBGrefine_8451:HG3_Ill_manta_2784:HG3_Ill_MetaSV_814:HG3_Ill_GATKHCSBGrefine_8108:HG2_PB_SVrefine2Falcon2Bionano_5945:HG2_Ill_SVrefine2DISCOVARplusDovetail_2041:HG2_Ill_MetaSV_785:HG2_Ill_GATKHCSBGrefine_8220:HG2_10X_SVrefine210Xhap12_8556:HG3_PB_SVrefine2Falcon1Dovetail_7425:HG3_PB_pbsv_11925;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8556:HG2_Ill_GATKHCSBGrefine_8220:HG2_Ill_MetaSV_785:HG2_Ill_SVrefine2DISCOVARplusDovetail_2041:HG2_PB_SVrefine2Falcon2Bionano_5945:HG3_Ill_GATKHCSBGrefine_8108:HG3_Ill_MetaSV_814:HG3_Ill_manta_2784:HG4_Ill_GATKHCSBGrefine_8451:HG4_Ill_MetaSV_813:HG4_Ill_SVrefine2DISCOVARDovetail_8674:HG4_Ill_manta_2901:HG4_PB_SVrefine2Falcon1Dovetail_7452:HG4_PB_SVrefine2PBcRDovetail_6154:HG4_PB_assemblyticsfalcon_4109;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0733591;ClusterMaxSizeDiff=0.0733591;ClusterMaxEditDist=0.212972;PBcalls=15;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=499;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=11:39001770-39001769;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=869.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:./.:0:0:0:0:./.:0:1:0:1:1/1:0:18:1/1:4:103:.:.:.
chr11	39186996	HG2_Ill_Krunchall_16651	T	TCCATTACAGATAACATAATCCTCATCCTCAAATTTACCTCTGCAAGTACTTTTTCAGTGACAGTATACTACAAACACAATC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_5496:HG4_PB_HySA_17778:HG2_PB_pbsv_12254:HG3_PB_HySA_18407:HG4_PB_assemblyticsfalcon_4112:HG2_PB_HySA_22212:HG4_PB_pbsv_12224:HG4_Ill_svaba_15300:HG4_Ill_manta_2903:HG4_Ill_SVrefine2DISCOVARDovetail_8676:HG4_Ill_GATKHC_19575:HG4_Ill_GATKHCSBGrefine_8453:HG4_Ill_250bpfermikitraw_16164:HG4_Ill_150bpfermikitraw_15534:HG3_PB_SVrefine2PBcRDovetail_5701:HG3_PB_SVrefine2Falcon1Dovetail_7427:HG3_Ill_svaba_15412:HG3_Ill_manta_2786:HG3_Ill_SVrefine2DISCOVARDovetail_8903:HG3_Ill_Krunchall_16341:HG3_Ill_GATKHC_19464:HG3_Ill_GATKHCSBGrefine_8110:HG3_Ill_250bpfermikitraw_15869:HG3_Ill_150bpfermikitraw_15394:HG2_PB_SVrefine2PBcRplusDovetail_1760:HG2_PB_SVrefine2PB10Xhap12_8833:HG2_PB_SVrefine2Falcon2Bionano_5947:HG2_PB_SVrefine2Falcon1plusDovetail_1854:HG2_Ill_svaba_15254:HG2_Ill_SVrefine2DISCOVARplusDovetail_2045:HG2_Ill_Krunchall_16651:HG2_Ill_GATKHC_19609:HG2_Ill_GATKHCSBGrefine_8222:HG2_Ill_250bpfermikitraw_16329:HG2_Ill_150bpfermikitraw_15392:HG2_10X_SVrefine210Xhap12_8558:HG2_PB_PB10Xdip_5497;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15392:HG2_Ill_250bpfermikitraw_16329:HG2_Ill_GATKHCSBGrefine_8222:HG2_Ill_GATKHC_19609:HG2_Ill_Krunchall_16651:HG2_Ill_SVrefine2DISCOVARplusDovetail_2045:HG2_Ill_svaba_15254:HG2_PB_SVrefine2Falcon1plusDovetail_1854:HG2_PB_SVrefine2Falcon2Bionano_5947:HG2_PB_SVrefine2PB10Xhap12_8833:HG2_PB_SVrefine2PBcRplusDovetail_1760:HG3_Ill_150bpfermikitraw_15394:HG3_Ill_250bpfermikitraw_15869:HG3_Ill_GATKHCSBGrefine_8110:HG3_Ill_GATKHC_19464:HG3_Ill_Krunchall_16341:HG3_Ill_SVrefine2DISCOVARDovetail_8903:HG3_Ill_manta_2786:HG3_Ill_svaba_15412:HG3_PB_SVrefine2Falcon1Dovetail_7427:HG3_PB_SVrefine2PBcRDovetail_5701:HG4_Ill_150bpfermikitraw_15534:HG4_Ill_250bpfermikitraw_16164:HG4_Ill_GATKHCSBGrefine_8453:HG4_Ill_GATKHC_19575:HG4_Ill_SVrefine2DISCOVARDovetail_8676:HG4_Ill_manta_2903:HG4_Ill_svaba_15300;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0481928;ClusterMaxEditDist=0.295858;PBcalls=14;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=81;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=162;REFWIDENED=11:39186997-39187158;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=870.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:14:66:1/1:1:7:6:24:./.:0:0:1:10:1/1:1:45:./.:.:.:.:.:.
chr11	39975535	HG3_Ill_GATKHCSBGrefine_8114	T	TTCCTCTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_5516:HG3_PB_pbsv_11930:HG3_PB_HySA_18415:HG2_PB_pbsv_12258:HG2_PB_SVrefine2Falcon2Bionano_5949:HG2_PB_SVrefine2PBcRplusDovetail_1762:HG2_PB_assemblyticsPBcR_4068:HG2_PB_SVrefine2PB10Xhap12_8835:HG2_PB_SVrefine2Falcon1plusDovetail_1856:HG3_PB_SVrefine2Falcon1Dovetail_7429:HG3_Ill_GATKHCSBGrefine_8114:HG3_PB_SVrefine2PBcRDovetail_5703:HG2_PB_HySA_22225:HG2_PB_PB10Xdip_5517:HG2_Ill_breakscan11_4275;NumClusterSVs=15;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_8114:HG3_PB_SVrefine2Falcon1Dovetail_7429;NumExactMatchSVs=2;ClusterMaxShiftDist=0.282828;ClusterMaxSizeDiff=0.282828;ClusterMaxEditDist=0.315609;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=316;DistBack=3646;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:39975536-39975550;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=871.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:21:39:0|1:20:1:1:31:./.:19:1:0:3:0/0:30:1:./.:4:32:.:.:.
chr11	40494004	HG4_Ill_GATKHCSBGrefine_8457	T	TAAAGAAGTGTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_22227:HG4_PB_pbsv_12228:HG3_Ill_MetaSV_817:HG2_PB_pbsv_12259:HG4_Ill_MetaSV_814:HG4_PB_assemblyticsfalcon_4121:HG4_Ill_GATKHCSBGrefine_8457:HG2_PB_SVrefine2Falcon2Bionano_5950:HG4_PB_SVrefine2Falcon1Dovetail_7455:HG2_PB_SVrefine2Falcon1plusDovetail_1857:HG3_PB_SVrefine2Falcon1Dovetail_7430;NumClusterSVs=11;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_8457:HG4_Ill_MetaSV_814;NumExactMatchSVs=2;ClusterMaxShiftDist=0.142395;ClusterMaxSizeDiff=0.142395;ClusterMaxEditDist=0.216828;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:40494005-40494018;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=872.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:28:0|1:29:2:2:21:1|0:0:5:18:0:0/1:32:8:0/1:7:32:.:.:.
chr11	41093832	HG2_Ill_SpiralSDKrefine_2672	T	CATTGTTCTCTTATTTTGATAATTCGCCACAGTCACCCCAACCCTCAGCAACCACCACCCTGATCAGTTAACAATCATAAGCATTGAGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_5522:HG4_Ill_GATKHC_19593:HG4_Ill_GATKHCSBGrefine_8459:HG3_Ill_GATKHCSBGrefine_8117:HG2_Ill_GATKHCSBGrefine_8228:HG4_PB_pbsv_12230:HG2_PB_HySA_22233:HG3_PB_pbsv_11934:HG4_Ill_SVrefine2DISCOVARDovetail_8682:HG2_PB_pbsv_12261:HG3_Ill_manta_2791:HG3_Ill_Spiral_12743:HG2_PB_assemblyticsPBcR_4072:HG2_PB_SVrefine2PBcRplusDovetail_1764:HG2_PB_SVrefine2PB10Xhap12_8838:HG2_PB_SVrefine2Falcon2Bionano_5952:HG2_PB_SVrefine2Falcon1plusDovetail_1859:HG2_Ill_manta_3420:HG2_Ill_SpiralSDKrefine_2672:HG2_Ill_SVrefine2DISCOVARplusDovetail_2052:HG2_10X_SVrefine210Xhap12_8564:HG4_PB_SVrefine2PBcRDovetail_6159:HG4_PB_SVrefine2Falcon1Dovetail_7457:HG3_PB_SVrefine2PBcRDovetail_5705:HG3_PB_SVrefine2Falcon1Dovetail_7432:HG3_Ill_SVrefine2DISCOVARDovetail_8911:HG4_Ill_250bpfermikitraw_16183:HG3_Ill_250bpfermikitraw_15887:HG2_Ill_Krunchall_16669:HG2_Ill_250bpfermikitraw_16349:HG2_Ill_150bpfermikitraw_15412:HG3_Ill_Krunchall_16361;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8564:HG2_Ill_SVrefine2DISCOVARplusDovetail_2052:HG2_Ill_SpiralSDKrefine_2672:HG2_Ill_manta_3420:HG2_PB_SVrefine2Falcon1plusDovetail_1859:HG2_PB_SVrefine2Falcon2Bionano_5952:HG2_PB_SVrefine2PB10Xhap12_8838:HG2_PB_SVrefine2PBcRplusDovetail_1764:HG2_PB_assemblyticsPBcR_4072:HG3_Ill_Spiral_12743:HG3_Ill_manta_2791:HG4_Ill_SVrefine2DISCOVARDovetail_8682;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0888889;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.211111;PBcalls=14;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=88;DistBack=-1;DistForward=104684;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:41093833-41093831;PctSeqSimilarity=0.9944;PctSizeSimilarity=0.9888;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=873.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:1:9:0:7:1/1:0:6:0:8:1/1:0:27:./.:.:.:.:.:.
chr11	41831796	HG2_PB_SVrefine2PB10Xhap12_8845	C	CAACAACAGAGGTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCCACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCAAGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACAGTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAA	20	PASS	ClusterIDs=HG2_PB_HySA_22245:HG2_PB_PB10Xdip_5526:HG3_PB_pbsv_11942:HG2_PB_HySA_22247:HG2_PB_pbsv_12270:HG4_PB_pbsv_12238:HG2_PB_HySA_22246:HG2_PB_SVrefine2PBcRplusDovetail_1771:HG2_PB_SVrefine2PB10Xhap12_8845:HG2_PB_SVrefine2Falcon2Bionano_5958:HG3_PB_SVrefine2Falcon1Dovetail_7436:HG4_PB_SVrefine2PBcRDovetail_6164:HG3_PB_SVrefine2PBcRDovetail_5710:HG2_10X_SVrefine210Xhap12_8571:HG4_PB_SVrefine2Falcon1Dovetail_7464:HG2_PB_SVrefine2Falcon1plusDovetail_1863:HG3_PB_HySA_18431;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5958:HG2_PB_SVrefine2PB10Xhap12_8845:HG2_PB_SVrefine2PBcRplusDovetail_1771;NumExactMatchSVs=3;ClusterMaxShiftDist=0.052737;ClusterMaxSizeDiff=0.046046;ClusterMaxEditDist=0.222512;PBcalls=16;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=1473;DistBack=11;DistForward=5405;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:41831797-41831810;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=874.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:87:1/1:0:11:0:61:./.:0:4:0:8:1/1:0:19:1/1:14:402:.:.:.
chr11	42740533	HG2_10X_SVrefine210Xhap12_8576	GCTTTCTTTT	AAAACAATCAACAGAGTGAAGAGATGACCCACAGAATGAAAGAAAACATTTGCAACCTATCCATCTGAAAAGGGATTAATAACCAGATATGTAAGGAGCTCAAACAACTCTATAGAAAAAAAAATTCTAATAATCCAAAAAAAAGGACAGAAGATCTGAACAGACATTTCTCAAAAGAAGACACACAAATAGAAAACAGGCATATGAAAATGTGCTCAACATCACTGATCATCAGAGAAATGCAAATCAAAATTATAATAAAATATCACATCATCCAAGTTAAAATGGCTTATGTCCAAAAGACAGGCAATGACAATTGCTGAGAGGAGGTAGAGAAAAGGGAACCCTCATACACTGTAAGTGGGAATGTAAATTAGTACAACCACTATGGAGAACAGTTTGGAGGTTCCTTTATAAACTAAAAATAGAGCTACCATATGATCCAGCAATCCCACTGCTAG	20	PASS	ClusterIDs=HG3_PB_pbsv_11947:HG3_PB_SVrefine2Falcon1Dovetail_7439:HG3_Ill_SVrefine2DISCOVARDovetail_8924:HG2_PB_SVrefine2Falcon1plusDovetail_1868:HG2_10X_SVrefine210Xhap12_8576:HG2_PB_pbsv_12275:HG3_Ill_MetaSV_822:HG2_Ill_MetaSV_787;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8576:HG2_PB_SVrefine2Falcon1plusDovetail_1868:HG3_Ill_SVrefine2DISCOVARDovetail_8924:HG3_PB_SVrefine2Falcon1Dovetail_7439;NumExactMatchSVs=4;ClusterMaxShiftDist=0.07431;ClusterMaxSizeDiff=0.0615711;ClusterMaxEditDist=0.196617;PBcalls=4;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=451;DistBack=0;DistForward=2634;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:42740543-42740532;PctSeqSimilarity=0.9913;PctSizeSimilarity=0.9934;PctRecOverlap=0.9848;SizeDiff=-3;StartDistance=0;EndDistance=9;GTMatch=0;TruScore=98;MatchId=875.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:18:0|1:40:1:0:17:0|1:35:0:0:18:0/1:30:16:0/1:13:51:.:1456:.
chr11	42743179	HG3_Ill_SVrefine2DISCOVARDovetail_8925	A	GACATAAAAGAGAAAGAGTAAAATACAATAGCTTTAATCAAATTAATTTATTTCAGGTAAATCAAGCTGTACTAGAATAAACACAGAGCAACTGGAATCATAAGGCATAGGTTCAAAGCTACTCCATTAATTGCATGAATGTGAACATCAATTTTCTTATCCGAGTCTTGATTTCCTTTATAAAGTGAGGATAATATTACCTGACCTGCCTGCTTCGTGAGGTTGTGAGAATAAGAAAAATAATTAAAATTTGAAAACTGTAAAGTATTCTAGACATATAAGGAATCTGTTTTAACATAAACATGTCCTTTCATGAATTCTTTTGAAGGGTAGATGCATGCATTTATTTGAAATTCCAAGCAGAAATAAATAGAACACTCAATTTAGGATAATTCCAGTGAGGTTAATTTACCAAGGGACTAATGACAAAGGTGTGGGTGGAAGCAGAGAAACCATAAGGGATAGTGCAGGAACCTGAGGCTATCAGCATCATGACTGTGAGTAACCTACGCCTGAAAAGATGCAAAGTGGAGGAGATAAACTAAAGAACCCAAATGGCAGGATCACAAAGATCAGACTACCTTGGGAAGAGCAATAACCTTCATTCACAGACACAGCCAATCTTACATGGCCTCAAAGTAAGAGAACTAGAGGTATGTATTCTGATTTCTCCCCATTGGCCGTACTCTACCAGCAGCCAGGAGACACAGGAGCTCGTCTTTGCAACTCGCACAGGCCAGGCTCCTGGGGCAAGAGTGAGGCGGACAAGGGAAGAGAGTGCTTCTGGAGGGATGAGGAAAGAAATCCAGCACAGAGAAAACAATCTTCTACCGCTCAGGATATCAACCCCAAAGCCATATTCTATTTTCCCTTTCTAAAGCTTCACTTCAACTTATGAAATCATGTCAACTTTCCCTCTACTGCTTCCTTCAGATTTATCTCCTATACGCCAATCCATTGCCTTTGTTCATGAACATATTAGGCAAGAATCTTTTGGGAGCAAGTGGCAGAGACCAGCTCAAAC	20	PASS	ClusterIDs=HG3_Ill_MetaSV_823:HG3_Ill_Cortex_615:HG2_Ill_Cortex_1384:HG3_PB_SVrefine2PBcRDovetail_5713:HG3_Ill_SVrefine2DISCOVARDovetail_8925:HG2_10X_SVrefine210Xhap12_8577:HG3_PB_SVrefine2Falcon1Dovetail_7440:HG3_PB_HySA_18439:HG3_PB_pbsv_11948:HG2_PB_pbsv_12276;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8577:HG3_Ill_SVrefine2DISCOVARDovetail_8925:HG3_PB_SVrefine2PBcRDovetail_5713;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0413263;ClusterMaxSizeDiff=0.0384986;ClusterMaxEditDist=0.169991;PBcalls=5;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=1023;DistBack=0;DistForward=5481;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:42743180-42743178;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.999;PctRecOverlap=0.998;SizeDiff=1;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=876.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:28:0|1:42:0:0:35:0|1:38:0:0:18:0/1:27:17:0/1:40:65:.:1456:.
chr11	42851060	HG3_Ill_Krunchall_16383	G	GAGAGAAAGGAAAGAAAGAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_15433:HG3_Ill_svaba_15443:HG2_Ill_svaba_15290:HG3_Ill_GATKHC_19510:HG2_Ill_GATKHC_19663:HG3_Ill_scalpel_11778:HG2_PB_pbsv_12279:HG3_Ill_Krunchall_16383:HG3_Ill_250bpfermikitraw_15908:HG3_Ill_150bpfermikitraw_15432:HG2_Ill_Krunchall_16695:HG2_Ill_250bpfermikitraw_16372;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15433:HG3_Ill_scalpel_11778:HG3_Ill_Krunchall_16383:HG3_Ill_250bpfermikitraw_15908:HG3_Ill_150bpfermikitraw_15432:HG2_Ill_Krunchall_16695:HG2_Ill_250bpfermikitraw_16372;NumExactMatchSVs=7;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.254545;PBcalls=1;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=19;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=11:42851059-42851064;PctSeqSimilarity=0.9636;PctSizeSimilarity=0.9286;PctRecOverlap=0.9298;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=877.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:27:0|1:34:10:1:16:./.:26:1:2:18:0/1:25:27:./.:.:.:.:.:.
chr11	42981473	HG4_Ill_SVrefine2DISCOVARDovetail_8690	A	AAGGCTTAATGACTTCCTAAAAGTGGAATTTCTGAGTCAATAGATAAATGTGTAATTTCGCTAACTATTGCCAAATGCCTCTCCTTAGTACCATACATACTAAAATCCCTGCAGTGAATGAAAGAATCTCTTTCCCCATAACTTTCCCGAAAGAGTTTGTGGTCAATAATGGTATCTCTTAGTACAGTTTTGATCTAAACTTATCTTATTATGGGTGAGACTGAGCATCTTTTATATGGGTAAGATTCATTTGCAATTTTCCTATGATCTTTCTGTTCATATCCTTATTCCACTTTTCAATAGCAGTGTTGGTATTTTTATTCTCTATTTTTATTTTTTTGTTTGTTTGTTTTACCCTTGGAAAGTCATGACTTCTCTATTTTTAGAAGCTCTTTTTATGTCAGAGATATTAATCCTTTATTATAAAAGTTGTAAATACTTTTCGAAACTGATATTTTAGCAGAAACATGAAGAAATTGAGTGAATAAAGCATACAGCTATGTAAAAAGGAGTATTTCTGTTCCGTTAGGAGGTTTATGGGGCTGCAGCAGGGTCCTTACTGGAAAGAAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7443:HG3_PB_SVrefine2PBcRDovetail_5717:HG2_Ill_breakscan11_4276:HG2_PB_pbsv_12280:HG2_PB_SVrefine2Falcon1plusDovetail_1869:HG3_PB_pbsv_11953:HG3_Ill_MetaSV_825:HG3_Ill_GATKHCSBGrefine_8135:HG4_Ill_MetaSV_816:HG4_Ill_GATKHCSBGrefine_8471:HG2_Ill_MetaSV_788:HG2_Ill_GATKHCSBGrefine_8244:HG4_PB_HySA_17808:HG4_PB_pbsv_12243:HG4_PB_SVrefine2Falcon1Dovetail_7469:HG4_PB_SVrefine2PBcRDovetail_6168:HG4_Ill_SVrefine2DISCOVARDovetail_8690:HG2_PB_SVrefine2Falcon2Bionano_5962:HG2_Ill_SVrefine2DISCOVARplusDovetail_2066:HG2_10X_SVrefine210Xhap12_8579;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8579:HG2_Ill_SVrefine2DISCOVARplusDovetail_2066:HG2_PB_SVrefine2Falcon2Bionano_5962:HG4_Ill_SVrefine2DISCOVARDovetail_8690:HG4_PB_SVrefine2PBcRDovetail_6168;NumExactMatchSVs=5;ClusterMaxShiftDist=0.165915;ClusterMaxSizeDiff=0.165915;ClusterMaxEditDist=0.222781;PBcalls=10;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=569;DistBack=5394;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=11:42981474-42981478;PctSeqSimilarity=0.9991;PctSizeSimilarity=1;PctRecOverlap=0.993;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=878.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:29:./.:31:7:11:23:1|0:0:28:29:0:0/1:30:18:0/1:14:30:.:.:.
chr11	44096300	HG3_Ill_GATKHCSBGrefine_8141	T	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG2_PB_pbsv_12286:HG2_PB_assemblyticsPBcR_4108:HG2_PB_PB10Xdip_5771:HG3_Ill_manta_2800:HG3_Ill_GATKHC_19527:HG3_Ill_GATKHCSBGrefine_8141:HG3_Ill_150bpfermikitraw_15447:HG2_Ill_GATKHC_19679:HG2_Ill_GATKHCSBGrefine_8251:HG2_PB_HySA_22281:HG4_Ill_GATKHC_19633:HG4_Ill_GATKHCSBGrefine_8483:HG4_Ill_FB_10548:HG2_Ill_FB_10585:HG3_PB_pbsv_11960;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8251:HG2_Ill_GATKHC_19679:HG3_Ill_150bpfermikitraw_15447:HG3_Ill_GATKHCSBGrefine_8141:HG3_Ill_GATKHC_19527:HG3_Ill_manta_2800;NumExactMatchSVs=6;ClusterMaxShiftDist=0.159292;ClusterMaxSizeDiff=0.159292;ClusterMaxEditDist=0.220183;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=2;DistForward=44418;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=91;REFWIDENED=11:44096283-44096373;PctSeqSimilarity=0.9815;PctSizeSimilarity=0.963;PctRecOverlap=0.9636;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=879.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:1/1:6:30:1:23:./.:1:8:0:10:1/1:0:28:./.:.:.:.:.:.
chr11	44963574	HG3_PB_SVrefine2PBcRDovetail_5724	A	ACACCACACACGACACAAACCACCACACACACCACACACATACGCACACACACCACACACACACCGTACAAACCACCACACACACCACACACATATGCACACACACACCACACAAACCCACCACACAACCACACACACATC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7452:HG3_PB_pbsv_11968:HG2_PB_pbsv_12295:HG2_PB_PB10Xdip_5784:HG4_PB_HySA_17832:HG2_PB_PB10Xdip_5783:HG3_PB_HySA_18469:HG4_Ill_manta_2915:HG4_Ill_MetaSV_819:HG4_Ill_GATKHCSBGrefine_8492:HG4_Ill_150bpfermikitraw_15592:HG3_PB_SVrefine2PBcRDovetail_5724:HG3_Ill_SVrefine2DISCOVARDovetail_8931:HG3_Ill_GATKHCSBGrefine_8144:HG2_Ill_manta_3432:HG2_Ill_MetaSV_789:HG2_Ill_GATKHCSBGrefine_8253:HG3_Ill_MetaSV_829:HG2_PB_HySA_22298:HG4_PB_pbsv_12262;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8253:HG2_Ill_MetaSV_789:HG2_Ill_manta_3432:HG3_Ill_GATKHCSBGrefine_8144:HG3_Ill_SVrefine2DISCOVARDovetail_8931:HG3_PB_SVrefine2PBcRDovetail_5724:HG4_Ill_150bpfermikitraw_15592:HG4_Ill_GATKHCSBGrefine_8492:HG4_Ill_MetaSV_819:HG4_Ill_manta_2915;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0893471;ClusterMaxSizeDiff=0.0622837;ClusterMaxEditDist=0.242215;PBcalls=10;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=140;DistBack=-430;DistForward=196;DistMin=-430;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=491;REFWIDENED=11:44963532-44964022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=881.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:48:1/1:5:25:1:16:./.:17:218:31:407:./.:1:6:./.:.:.:.:.:.
chr11	47118962	HG2_PB_SVrefine2PB10Xhap12_8865	A	AGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8865:HG2_PB_HySA_22312:HG2_PB_pbsv_12303:HG2_PB_SVrefine2Falcon2Bionano_5976:HG2_PB_SVrefine2PBcRplusDovetail_1791;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8865:HG2_PB_SVrefine2PBcRplusDovetail_1791;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0961538;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.211538;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=50;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=92;REFWIDENED=11:47118963-47119054;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.98;PctRecOverlap=0.8235;SizeDiff=1;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=92;MatchId=882.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:64:1/1:2:9:1:8:./.:0:0:0:0:./.:6:3:./.:.:.:.:.:.
chr11	47392640	HG2_Ill_SVrefine2DISCOVARplusDovetail_2086	G	GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACAACGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCTGCCTCTACTAAAAATACAAAAAACTAGCTGGGCATGGTGGCACTCGCTTGTAGTTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCTGACATCACACCACTGCAATCCAGCCTGGGCGACAGAGCGAGAGTCCATCTCAAAAAAAAAAAAGAAAAGAAAAAAGAAAGACAGACTGGAAAAATAGCTTTTATCAATCTCTGATATGCTACATATGTCATGGAGAAATGCAGAATGGCATGATATGAAATTCCATTTTTGAATGAATAAAATATACATGTGTATGTATATATACTTATTAACACTTAGGATTATATACACACAATAAAACGTCTGTAAGGATAAACTAAGGTTCTATCAGTGGGAAATGAGATTGAAAAGAGGGGGATGTGTTACTTGATATGCTGTTGTATTTTTAAAGTTTTTGCAATTAATATTTGTTACTTTAATAATTAAAAATTAGGCTGGGCGTGGTGGCTCACACTTGTAATCTCAGCACTTTGGGAGGCCAAGGCAGGAGGATTGCTTGAGCCCAGGAGTTCGAGACCAGCCTAGGCAAACATGGTGAAACCCCATCTCTATAAAAAATACAAAAAATTAGCCAGGCATGGTGGCACAAACCTGTAGTCCCAGCTACTTGGGGGCCTGAGGCAGGAGAATTGCTTGAACCCCATAGGTAGAGGCTGCAGTGAGCCAAGATTGCACCACTGCACTCCAGCTTGGGTGACAAAGTGAGACCCTGCCTTTTTTTTTTTAATTTTCGAGACGAAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCAAGCGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAAAGATGGAGTTTCATCATGTTGGCCAGGTTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTAAGATTACAGGCATGAGCCACTGGGCCTGGCCTAATTTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTTAACTCCTGACCTCAAGTGATCCACCTGTCTCAGCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAGCCTTTTCTTTCTTTCTTTTTTTTTTTTTAAGACAGTGTCTTGGCCAGGCACGGTGGCTCACGCCTGTAATCCCAACACTTTGGGACGCTGAGACAGGTGGATCACTTGAGTCAGGAGTTCAAGACCAGCCTGGCCAACATAATGAAGCCCCATCTCTACTAAAAATACAAAAATTAGGCTGGGCTCAGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCTGAGGCGGGTGGATCACCTGAGATCAGGATTTCAACCAACCTGGCCAACATGGTGAAACCCCGTATCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGGGCACCTATAATCCCAGCTACTCAGAAGACTGAGGCAGGAGAATCACTTGAACCCAGGGGCAGAGGTTGCAGTGAGCCAAAATCGCGCCACTGCACTCCAGCCTGGGTGAGACAGTGAAACCCTGTCTCAAAAAAATAAAAATTAAAATACAAAAATTAGCCAGGCGTGTTGGCATGTGCCTGTAGTCCCAGGTACTCGGGAGGCTGAGGCAGGAGGAGAATAACTTGAACCCAGGAGGCAGAAGTTGCAGTGAGCCGAGATTGCGCCACTGCGCTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAATAAATAAGACCCCAAAATAGTAAAAATAAAAATTAGAAGATTTTGCCCAGGCGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1884:HG2_PB_pbsv_12304:HG3_PB_pbsv_11979:HG4_PB_HySA_17851:HG4_PB_pbsv_12271:HG2_PB_HySA_22315:HG2_PB_PB10Xdip_5793:HG3_PB_SVrefine2Falcon1Dovetail_7458:HG4_PB_SVrefine2Falcon1Dovetail_7485:HG2_PB_SVrefine2PB10Xhap12_8866:HG2_PB_SVrefine2PBcRplusDovetail_1792:HG2_10X_SVrefine210Xhap12_8594:HG3_Ill_SVrefine2DISCOVARDovetail_8941:HG4_PB_SVrefine2PBcRDovetail_6183:HG4_Ill_SVrefine2DISCOVARDovetail_8706:HG3_PB_SVrefine2PBcRDovetail_5734:HG2_Ill_SVrefine2DISCOVARplusDovetail_2086:HG2_PB_SVrefine2Falcon2Bionano_5978;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2086:HG3_PB_SVrefine2PBcRDovetail_5734;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0669578;ClusterMaxSizeDiff=0.0659874;ClusterMaxEditDist=0.20287;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1998;DistBack=5404;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=294;REFWIDENED=11:47392641-47392934;PctSeqSimilarity=0.9861;PctSizeSimilarity=0.999;PctRecOverlap=0.8639;SizeDiff=2;StartDistance=-271;EndDistance=-271;GTMatch=0;TruScore=94;MatchId=883.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:1/1:0:21:2:21:./.:0:7:0:2:1/1:0:12:1/1:14:304:.:2009:.
chr11	47659832	HG3_PB_SVrefine2Falcon1Dovetail_7463	C	CGCCGGGCGCGGTGGCTCATGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGATATTGAGAACACGGTGAAACCCGTCTCTACTAAAAATACAAAAAATCAGCCGGGCGTGGTGGCAGATGCCTGTAATCCCAGCTACTCAGGAGGTTGAGGGAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCCATTGCACTCCAGCCTGGTCAACAGAGTGAGACTCTGTCTCAAAAAAAACCACATTAGAATTGGGGGCTATGTTAAAGCCTTAAAAAGTACACTGAGGACTGCAGGAACTGTTGCTATGTTTATATATATATGCAATTTTTTAGAGACAGGGTCTCACTGTTGCCCAGGCTGGAGTGCAGTGGTGTAATCACAGCTCACTGCAGCCTCAACCTCTCCAGCACAAGTGGTCCTCCCACCTCAGCCTCCCAGGGAGCTGGACTTCAGGTGCATGCCACAACACCCAGCTAATTCTGTTTTTTAATTTTTTTGTAGAGATGGGGTCTCACCATGTTGCCTAGAGGTTGGTCTGGAACTCCTAGGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAAGTGTTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCTAATTATTTATTTATTTATTATTTTTGTAGAGATGGGGTTCTTCCTATGTTGCCTAAGCTGGTCTCCAACTCTCGACCTCAAGTGATCTTGCCACCTTGGCCTCCAGAAGCACTAGGATTACAGGTGTGAGCCACTGTGCCCAGCCAATACTGCTAGTTTTTTTTTTGAGATGGAGTCTCACTCTGTTGCCTAGGCTGGAGTGCAGTGGTGCCATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCACTTGCCTGAGCCTCCTGAGTAGCTGGGATTACAGGTGTCCACCACCACTCCCGGGTAATTTTGTATTTTTAGTAGACACAGGGTTTCACTGGTGTTGGCCAGGCTGGTCTCAAATTCCTGACCTCAGGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGATTACAGAAGTGAGTCACAACTCTTAGCCTACTGCTACATTTTTGAGAGTTACACAAACAGTGACATACCCTTCGGCCGAGCACGGTGGCTCACTCCTGTAATCCAGCACTTTGTGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACGTGGTGAAACCCCGTCTCTACTAAAAATACAAAAACTTAGCTGGGCATGGTGGCACACGCCTGTAATCCTGGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCTACTGTACTCCAGCCGGGGCAACAGTGAGACTCGTTTCAAAAAACAAACAAACAAAAAACATACCCTTAGTACCACTAGGAAATAGAATAAACTAGAAAACCCATTAGTTTTATATTGTGAATTACATTCATGCTGCAGAAACTTCCCTTCGATTGTTCTAAATGCTACAGACTTCTTATTCATAACACCTTTATAAAACACAGAATTGCCCTTTATAAACAATTCTTTCTCCAGAAGTACGTTCTAAATACTAAGACTTCCTTAAAGGTTAATTCAGGTTAACCTACATAGTAATAGGTGCAAATGAGAAATCCGTACATTCAAAATTATATTACAATCTTTAGCATTAGAAGTAAAAAAATAGGCCTGGCGCGGTGGCTCACTCCTGTAATCCTAGCACTTTGGGAGGCCGAGGTGGGCAGATCACAAGGTCAGGCGTTCGAGACCAGCCTAGCCAACATGGCAAAACCCCGTCTCTACTAAAAATACAAAAATTAGCAGGGCGTGGTGGTGAGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAGTGCTTGTACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGCACCACTGCACTCCAGCTTGGGCGACAGAGTGAGACTCCGTCTCAAAAACAAAAAAAAAGTAACTTTGATGTTTTAAAAACATTTCGATTTCCAGTTCTTTGGAACTTGGAAAATAAAAACATTTTATTAAAAAATCTCAAAGCATGCAGAAAAATTAAAATACCTATGCATCCACCACCAAGGCTAAACCGATGTTAACATTTTGTGCCCTTTTTTGCTTAACATCCCTGCCTTCTTCCTTCTTTTTATTTTTTCAGACAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGTAACCTCCACCTCCTGGGTTCAAGCCATTCTCGTGCCTCAGTCTCCTGAGTTGCTGAGATTACAGGCATGCACCACCATGCCTGGCTAATTTCTGTATTTTTAGTAGAGACGGGATTTTGCCATGTTGCCCAGGCTGGCCTCAAACTCCTGGCCTCAAGTCATCCACCAGCCTCGGCCTCCCATACTGCTGTGATTACAGGCATGAGCCACTGCGCCCGGCCTTGCCTTCTTAAAATATTTTATTATTTTTTGAAACAAGGTCTCACTATGTTGCCAAAGGTGGTCTTGAACTCCTGGGCTCAAGCCATCCTCTCATTTGGTCATCTCTCAAAGTCCTGGGATTACAGGGGTGAGCCACTATGCCTGGCCTTGCGGTCTTAAAATAAAGTGCCACAGACAAAGCTGAAGTTTCATCTCTCATCCCTCCCTTTTCCCACAAGTAAACTACCATGCCTTCATGTACAATTTGGTGAGGCTTTTAAACTGTAAATATTTAGGCCGGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACAAGGTCAGGAGATTGAGACCATCCTGGTTAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTGGTGATGGGCACTTGTAGTGCCAGCTACTCAAGAGGATGAGGCAGGAGAAAGGTGTGAACCCGGGAGGCAGAGCTTGCAGTGACCCGAGATCACGCCACTACACTCCAGCCTGGGCGTCAGAGCAAGTCTCCGTCTCAAAAAAAAAAAAAAAAAAAATTTAATATAACGCACAGAATAGTGCGCAAAACACAAAAGTACAAGTAAAAAATAATTAAAAGGCAAACATCCATATAGCCATAATCTAGGTCAAGGAAAATCCTTTTTTTCCCCAAGACAAAATCTCACTCTGTCACCCAAGCTGGAGTGCAGTGGTGCAATCCCAGCTCACCATAGCCTCGACCTAAGGGGCTCAAGTGATCTTCTCCCCTCTGCTTCCTGAGTATCGGGAACCACAGGCATGTAACATCACACCTGGCTAATGTTTTTTTTTTTAAATTTTTGTAGAGGAGGTCTCACTATGTTGCCCAGGCTGGTCTCAAACTTCTGGGCTCAAGCAGTCCCCAGCCTCAGCCTCCAAAAGTGCTGGGATGACAGACATGATCCACCAGTTCTAGCCAAGGAAAGTCATTGTCATTATCCCAGACATGTGGTTCCTCCTCTCCATCTCCCAACAAATAACCACTACCCTGAATTTTATGTTTACTTTGTTATATTCTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCACTTGTTGCCCAGGCTGGAGTGCAATGGCACCATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTTAAGCGATTCTCCAGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCACCACATCTGGCTAATTTTTTTGTATTATTAGTAGAGATGGGGTTTCACCATGTTGGCCAGCCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGTCACTGCACCCAGCCAGTTATATTCTTTTTTTAAAAATATAAGTTTTTTAATAAAAAATATTTTACCAGGTTAACACCAGAAATAAGAGGAAAATAACTTCAGAAAAAAAAAATGTATGTTTTAGTCAGCTTCCTTCTTCCTTTGAAGAAATAAACTGAGCTGTGTAGGTGATCAAATAAGTGCATGTATTTAATTTCTGCTCCAAATGACTGGGTCAGAGGAAGAAGGTATGTAGAGCAAAATAAAATACTTCAGGCTGGGCACAGTGGCTCATGCCTGTAATCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGCGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGACGTGGTGGCACATGCCTATAATCTCAGCTACTAGGGAGGCTGAGGCAGGAGAACAGCATGAACCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAACAAAAACAAAAAAAAAAAAGAAAAAAAAAACCCACTTCATTTTAAAGGAATTCCTGTTGCTTCCCAGGAAAGAAGATGTTTTAAGAAAATGTTTTTCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1796:HG4_PB_pbsv_12275:HG3_PB_pbsv_11984:HG2_PB_pbsv_12308:HG4_PB_HySA_17858:HG2_PB_PB10Xdip_5798:HG2_PB_PB10Xdip_5797:HG2_PB_assemblyticsPBcR_4139:HG3_PB_SVrefine2PBcRDovetail_5737:HG3_PB_SVrefine2Falcon1Dovetail_7463:HG4_PB_SVrefine2Falcon1Dovetail_7489:HG4_Ill_SVrefine2DISCOVARDovetail_8712:HG3_Ill_SVrefine2DISCOVARDovetail_8947:HG4_PB_SVrefine2PBcRDovetail_6186:HG2_10X_SVrefine210Xhap12_8599:HG2_PB_SVrefine2Falcon2Bionano_5982:HG2_Ill_SVrefine2DISCOVARplusDovetail_2093:HG2_PB_SVrefine2PB10Xhap12_8870:HG2_PB_SVrefine2Falcon1plusDovetail_1888;NumClusterSVs=19;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7463;NumExactMatchSVs=1;ClusterMaxShiftDist=0.196825;ClusterMaxSizeDiff=0.196825;ClusterMaxEditDist=0.250357;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=4524;DistBack=4752;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=273;REFWIDENED=11:47659833-47660105;PctSeqSimilarity=0.9947;PctSizeSimilarity=0.9947;PctRecOverlap=0.9798;SizeDiff=-24;StartDistance=-80;EndDistance=-80;GTMatch=0;TruScore=98;MatchId=884.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:30:0:7:./.:4:2:1:0:1/1:2:27:1/1:0:753:.:.:.
chr11	47806640	HG3_Ill_GATKHCSBGrefine_8152	T	TGAGTTTCAGATTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACGACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_18499:HG2_PB_pbsv_12309:HG2_PB_HySA_22324:HG3_PB_pbsv_11985:HG3_PB_SVrefine2PBcRDovetail_5738:HG2_PB_SVrefine2Falcon1plusDovetail_1889:HG3_Ill_MetaSV_834:HG3_Ill_GATKHCSBGrefine_8152:HG2_Ill_MetaSV_791:HG3_PB_SVrefine2Falcon1Dovetail_7464;NumClusterSVs=10;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_8152:HG3_Ill_MetaSV_834;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0575296;ClusterMaxSizeDiff=0.0507614;ClusterMaxEditDist=0.168874;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=292;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:47806641-47806655;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=885.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:28:./.:6:14:9:5:./.:22:0:1:10:0/1:30:10:./.:.:.:.:.:.
chr11	48289844	HG2_10X_SVrefine210Xhap12_8606	C	CTTTTATTTTATTTTATTTTATATTTTATTTTATTTTATTTTATTTTATTTTATTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATATT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1893:HG2_PB_pbsv_12314:HG2_PB_PB10Xdip_5802:HG2_PB_PB10Xdip_5801:HG3_PB_HySA_18503:HG4_PB_pbsv_12279:HG3_PB_pbsv_11989:HG4_Ill_SVrefine2DISCOVARDovetail_8716:HG4_Ill_MetaSV_821:HG4_Ill_GATKHC_19676:HG4_Ill_GATKHCSBGrefine_8501:HG4_PB_SVrefine2Falcon1Dovetail_7493:HG3_PB_SVrefine2PBcRDovetail_5743:HG3_PB_SVrefine2Falcon1Dovetail_7468:HG3_Ill_Spiral_12791:HG3_Ill_Krunchall_16427:HG3_Ill_GATKHC_19563:HG3_Ill_GATKHCSBGrefine_8155:HG3_Ill_250bpfermikitraw_15948:HG3_Ill_150bpfermikitraw_15478:HG2_PB_SVrefine2PB10Xhap12_8874:HG2_PB_SVrefine2Falcon2Bionano_5985:HG2_Ill_SVrefine2DISCOVARplusDovetail_2102:HG2_Ill_GATKHC_19721:HG2_Ill_GATKHCSBGrefine_8267:HG2_10X_SVrefine210Xhap12_8606:HG2_PB_SVrefine2PBcRplusDovetail_1801:HG4_PB_HySA_17868:HG2_PB_assemblyticsPBcR_4147;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8606:HG2_Ill_GATKHCSBGrefine_8267:HG2_Ill_GATKHC_19721:HG2_Ill_SVrefine2DISCOVARplusDovetail_2102:HG2_PB_SVrefine2Falcon2Bionano_5985:HG2_PB_SVrefine2PB10Xhap12_8874:HG3_Ill_150bpfermikitraw_15478:HG3_Ill_250bpfermikitraw_15948:HG3_Ill_GATKHCSBGrefine_8155:HG3_Ill_GATKHC_19563:HG3_Ill_Krunchall_16427:HG3_Ill_Spiral_12791:HG3_PB_SVrefine2Falcon1Dovetail_7468:HG3_PB_SVrefine2PBcRDovetail_5743:HG4_PB_SVrefine2Falcon1Dovetail_7493;NumExactMatchSVs=15;ClusterMaxShiftDist=0.28877;ClusterMaxSizeDiff=0.28877;ClusterMaxEditDist=0.28877;PBcalls=15;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=99;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=47;REFWIDENED=11:48289845-48289891;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.9083;PctRecOverlap=0.9083;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=886.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:66:1/1:0:5:3:36:./.:0:8:0:3:1/1:0:60:./.:.:.:.:.:.
chr11	48378752	HG3_Ill_SVrefine2DISCOVARDovetail_8952	C	CTCATGAGGACTTACTCTCATGAAAATAGCAAGGGGGAAATCTGCCCCTGTAATCCATTCACCCCCGACCAGTTCCCTCCCACAGCATTGAAAATTACAATTCAACATGAGATTTGTGTGGGGACACAGAGCCAAACTGTGTAATTCTGTCCCAGTCCCTCCCAAATT	20	PASS	ClusterIDs=HG4_PB_pbsv_12280:HG2_PB_pbsv_12315:HG2_PB_PB10Xdip_5803:HG4_PB_HySA_17869:HG2_PB_HySA_22333:HG4_Ill_svaba_15374:HG4_Ill_MetaSV_822:HG4_Ill_GATKHCSBGrefine_8502:HG3_Ill_svaba_15484:HG3_Ill_Spiral_12792:HG3_Ill_SVrefine2DISCOVARDovetail_8952:HG3_Ill_MetaSV_837:HG3_Ill_GATKHCSBGrefine_8156:HG3_Ill_250bpfermikitraw_15949:HG3_Ill_150bpfermikitraw_15479:HG2_PB_SVrefine2PBcRplusDovetail_1802:HG2_PB_SVrefine2Falcon2Bionano_5986:HG2_Ill_svaba_15327:HG2_Ill_SpiralSDKrefine_2722:HG2_Ill_SVrefine2DISCOVARplusDovetail_2103:HG2_Ill_MetaSV_792:HG2_Ill_GATKHCSBGrefine_8268:HG2_Ill_250bpfermikitraw_16418:HG2_Ill_150bpfermikitraw_15475:HG2_PB_assemblyticsPBcR_4148:HG2_PB_SVrefine2Falcon1plusDovetail_1894:HG3_PB_pbsv_11990:HG2_PB_SVrefine2PB10Xhap12_8875;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15475:HG2_Ill_250bpfermikitraw_16418:HG2_Ill_GATKHCSBGrefine_8268:HG2_Ill_MetaSV_792:HG2_Ill_SVrefine2DISCOVARplusDovetail_2103:HG2_Ill_SpiralSDKrefine_2722:HG2_Ill_svaba_15327:HG2_PB_SVrefine2Falcon2Bionano_5986:HG2_PB_SVrefine2PBcRplusDovetail_1802:HG3_Ill_150bpfermikitraw_15479:HG3_Ill_250bpfermikitraw_15949:HG3_Ill_GATKHCSBGrefine_8156:HG3_Ill_MetaSV_837:HG3_Ill_SVrefine2DISCOVARDovetail_8952:HG3_Ill_Spiral_12792:HG3_Ill_svaba_15484:HG4_Ill_GATKHCSBGrefine_8502:HG4_Ill_MetaSV_822:HG4_Ill_svaba_15374;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0872093;ClusterMaxSizeDiff=0.0813954;ClusterMaxEditDist=0.206897;PBcalls=11;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=167;DistBack=214;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=11:48378753-48378753;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=887.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:57:1/1:0:22:1:17:./.:1:3:1:5:1/1:0:31:./.:.:.:.:.:.
chr11	48755846	HG2_PB_SVrefine2Falcon1plusDovetail_1900	T	TAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGTATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_5806:HG4_PB_HySA_17871:HG4_PB_pbsv_12289:HG2_PB_SVrefine2PBcRplusDovetail_1807:HG2_PB_SVrefine2Falcon2Bionano_5992:HG3_PB_SVrefine2PBcRDovetail_5748:HG2_PB_SVrefine2PB10Xhap12_8879:HG2_PB_SVrefine2Falcon1plusDovetail_1900:HG3_PB_SVrefine2Falcon1Dovetail_7475:HG4_PB_SVrefine2Falcon1Dovetail_7499:HG3_PB_HySA_18510;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1900:HG2_PB_SVrefine2PB10Xhap12_8879:HG3_PB_SVrefine2PBcRDovetail_5748;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.118457;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=351;DistBack=1;DistForward=4;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:48764974-48748442;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9972;PctRecOverlap=0.9943;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=888.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:38:1/1:2:16:1:8:1/1:0:5:0:14:1/1:0:17:1/1:1:105:.:.:.
chr11	50522127	HG2_PB_SVrefine2Falcon1plusDovetail_1907	T	TTAACTCTGTGAGAAGAATGCACACATCAGAAAGCAGTTTCTCAGAGACCTTCTTTCTAGTTTTTATCTGAAGATATCTCCTTTTTCACCA	20	PASS	ClusterIDs=HG4_PB_pbsv_12316:HG2_PB_PB10Xdip_5930:HG2_PB_pbsv_12339:HG3_PB_pbsv_12018:HG4_PB_SVrefine2PBcRDovetail_6199:HG4_PB_SVrefine2Falcon1Dovetail_7514:HG4_Ill_svaba_15398:HG4_Ill_SVrefine2DISCOVARDovetail_8732:HG4_Ill_Krunchall_17031:HG4_Ill_GATKHCSBGrefine_8524:HG4_Ill_250bpfermikitraw_16273:HG4_Ill_150bpfermikitraw_15635:HG3_Ill_svaba_15502:HG3_Ill_manta_2811:HG3_Ill_Spiral_12806:HG3_Ill_SVrefine2DISCOVARDovetail_8966:HG3_Ill_Krunchall_16442:HG3_Ill_GATKHCSBGrefine_8176:HG3_Ill_250bpfermikitraw_15973:HG3_Ill_150bpfermikitraw_15502:HG2_PB_SVrefine2PBcRplusDovetail_1818:HG2_PB_SVrefine2Falcon1plusDovetail_1907:HG2_Ill_svaba_15345:HG2_Ill_manta_3443:HG2_Ill_SVrefine2DISCOVARplusDovetail_2120:HG2_Ill_Krunchall_16753:HG2_Ill_GATKHCSBGrefine_8288:HG2_Ill_250bpfermikitraw_16440:HG2_Ill_150bpfermikitraw_15499:HG2_10X_SVrefine210Xhap12_8615:HG2_Ill_breakscan11_4282;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8615:HG2_Ill_150bpfermikitraw_15499:HG2_Ill_250bpfermikitraw_16440:HG2_Ill_GATKHCSBGrefine_8288:HG2_Ill_Krunchall_16753:HG2_Ill_SVrefine2DISCOVARplusDovetail_2120:HG2_Ill_manta_3443:HG2_Ill_svaba_15345:HG2_PB_SVrefine2Falcon1plusDovetail_1907:HG2_PB_SVrefine2PBcRplusDovetail_1818:HG3_Ill_150bpfermikitraw_15502:HG3_Ill_250bpfermikitraw_15973:HG3_Ill_GATKHCSBGrefine_8176:HG3_Ill_Krunchall_16442:HG3_Ill_SVrefine2DISCOVARDovetail_8966:HG3_Ill_Spiral_12806:HG3_Ill_manta_2811:HG3_Ill_svaba_15502:HG4_Ill_150bpfermikitraw_15635:HG4_Ill_250bpfermikitraw_16273:HG4_Ill_GATKHCSBGrefine_8524:HG4_Ill_Krunchall_17031:HG4_Ill_SVrefine2DISCOVARDovetail_8732:HG4_Ill_svaba_15398;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0962567;ClusterMaxSizeDiff=0.0748663;ClusterMaxEditDist=0.176166;PBcalls=8;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=90;DistBack=-1;DistForward=25271;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=11:50522128-50522129;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=889.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:35:1/1:1:9:0:7:1/1:1:20:0:20:1/1:0:43:./.:.:.:.:.:.
chr11	55320493	HG4_Ill_GATKHCSBGrefine_8529	T	TGAAAAACACATTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGAGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAATAAAAAAAAAAAAAATAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_12029:HG3_PB_HySA_18547:HG4_PB_assemblyticsfalcon_4238:HG2_PB_pbsv_12350:HG4_PB_pbsv_12328:HG4_PB_SVrefine2Falcon1Dovetail_7519:HG3_PB_SVrefine2Falcon1Dovetail_7487:HG4_Ill_MetaSV_826:HG4_Ill_GATKHCSBGrefine_8529:HG3_Ill_GATKHCSBGrefine_8182:HG2_Ill_MetaSV_796:HG2_Ill_GATKHCSBGrefine_8292:HG4_PB_HySA_17915;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8292:HG2_Ill_MetaSV_796:HG3_Ill_GATKHCSBGrefine_8182:HG4_Ill_GATKHCSBGrefine_8529:HG4_Ill_MetaSV_826;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0705882;ClusterMaxSizeDiff=0.0705882;ClusterMaxEditDist=0.179412;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=339;DistBack=3;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:55320494-55320507;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=890.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:33:1|0:2:24:28:2:./.:32:0:0:5:0/1:33:20:0/1:8:34:.:.:.
chr11	56143091	HG2_10X_SVrefine210Xhap12_8622	A	AGAAAAGATATGGCTCACATCAATTGCACCCAGGCGACAGAGTTTATTCTTGTGGGCCTCACAGACCATCAGGAGTTGAAGATGCCCCTCTTTGTGCTATTCTTATCCATCTACCTCTTCACAGTGGTAGGCAACTTGGGTTTGATCCTACTCATTAGAGCGGATACAAGTCTCAACACACCAATGTACTTCTTTCTTAGCAACCTAGCTTTTGTGGATTTCTGTTACTCTTCTGTCATTACACCCAAAATGCTTGGGAATTTCTTGTACAAACAAAATGTTATATCCTTTGATGCATGTGCTACTCAACTGGGCTGCTTTCTCACCTTCATGATATCAGAATGCTTGCTACTGGCTTCCATGGCCTATGACCGATATGTGGCCATTTGTAACCCTCTATTGTATATGGTTGTAATGACTCCAGGAATCTGCATTCAACTTGTAGCAGTTCCTTATAGCTATAGCTTCCTAATGGCACTATTTCACACCATCCTCACCTTCCGCCTCTCCTATTGCCACTCCAACATTGTCAACCATTTCTATTGTGATGACATGCCTCTCCTCAGGCTAACTTGCTCAGACACTCGCTTCAAACAGCTATGGATTTTGGCCTGTGCTGGTATCACATTCATCTGCTCTGTTCTGATTGTCTTTGTCTCCTACATGTTCATTATTTTTGCCATCCTGAGGATGAGCTCAGCTGAAGGAAGACGCAAAGCCTTCTCCACCTGTAGCTCTCACATGCTGGCAGTCACCATATTCTATGGCACCCTGATCTTTATGTACTTACAACCAAGCTCAAGCCATTCTCTTGATGCAGACAAGATGGCCTCTGTCTTCTACACGGTGATTATTCCCATGTTGAATCCCTTGATTTACAGTCTCAGGAACAAAGATGTAAAAGATGCCCTGAAGAAAGTCATCATCAATAGAAACCATGCTTTTATTTTTCTGAAACTGAGAAAATGAGTTCAATAGACAAAAATGGGCATTCCTTCATAACCAGGTTTTCCCCCACATTAATAAAACTATTGGAATACCTTGCTCTTAATTGGTAAGCAATAAAGATCTGTTTACTGAAAAAATTATTCTTTGCATTTTTGTAATTTTTTTGACTTAAAACCATATTTCATATGTAGAAAGTACCATAAGAATTTACATCATTTCTCACAGGAAAAATGTATTTTTAAAATGTATTATCTCATCTGATAGTTATACAATTAGGTGCTGCCAGGAATAGAAAAAATGAAAGCACTCTGAATGCCCAGTTCAGGGTTGTAAGAGTTCTTTAACAATATGTTAAGACTATTTTATAGTATATTTAAAATTAAATTTAATAATATTTAATTAAATTACCTGCAACAGTGTCTCTACATAGAGGTAATTTTTCTCCCAGGGGGACATTTGTCAATACTTAGGCTTATTATTGATTTTCACAATGACAGGATACTGTGAAGGAATGCTATTGCTATCTAGAGGGTGGAGGCCAGGTGTGCTGCAAAATATTTTACAATTCACAACATGGCCCCTCACTCAAAAAATTATACATCCCCAAATGATAATAGTGCTGAAGTTGAGAGAGCCGGTGTTAAATAATTTTTTTTTTCCTCAAGAGTCATTCTATAGATTCATTAAGATCAAGCCGGTTGATAGTGTTGCTCAAGCCTTTTTTGGCTTTATGGTTTTCTCTTTATTTGCTCTATCAATTATTAAGACTGATGTTAAAATCCCAAGTTAAATTATGTATTTACATTTATTTTCTGTCAGTTTTAATTTTAAATGTTTTGGGGCTCCTTTGTCATTTGTGCATGAATTTCTAGTTACTTAATTTACTGATTTTTTTCCTTATTAGCATTATTAAATGCTCTTCCTTTTTTGTGATAGCATTTAATGACTAAAAGTCTATATTTTTCTGACAATATAACCACTTCATCTCTCTTGCGGTTATTATAAGCATGGAAGAGTATTCCATCATTTTACTTTCATTATATTTGTGATTTTAAGTGTACATTTTGTCTCTTGTAAACAGCTAATAGTTGGATTTTTGTCTTTGTAATTAACTCTGAATAGCTCTCCCTTTTAATTAGAGTATTAAGTCCATTCATTTTTAACACAATTACTGATATGGCTGAATTTATGTCTTTCATGTTGTTAATATTCTAAATAGTTCAGTTTTTTTTTATTTCCTTGTTTGAGTTCTAACGCCTGTGTTAAAAAATTTTAAGTTAGAAATTTAATTTCTGATGTGTTAAATATGTACACACACAAACAGACACACAGACGTGCATTAGTAATGGTTGCTCTAAGGATTTCAATATTGATTTTAACTTATCACCATATACTTCAGATTAATACTAGCATAGCACTATGTAAATACATACATACATACACACATATGCAGTGTCTACTTATAAACCTCAAGACTGTATTATCATAATTGAATATGTATGCAATTTTATGTCATTAGGAGGACACAAGAAATATACAATTGTATGTCATTTATATAAATTAAGAAGAGAATACTTATGTAGACTATATATACACAGACATATGACTATATCAATAATATGATGATACATCAATAAATAAAAAAAATGATTGACATATCTGCCATTTCCAGTGTGCTTCGTGTATTTCTGTGATTGAAATTATCATACAGAATAATTTCTTATCCTCTGAAAGACATTCTTATGTACTTATTATAAGGCAGATTTGCTAGCAATGAATTATCTTAATCTCATTTACCCAGGTCTTTAAGTCACCTTTATTTCTGAAATATAATTTGACTGGATATAGTATTCCCTGTAGACAACAGTTTTCTTATAGCAGTTTGGACATGTCATCCCACCACATTCCATATTTTCCTTGTAAGAAGTCATGTGTTAAACTTGTGATTTTCTATAGAATTAATCAACAACTTTCAAGATTTTTCGCTGTCTTTGGCACTCAATACTTTGACTTTCATTAGCCTAAAGATTTCTTGGTGTTAATCTAACTTAAGTTTGGTTGAGTCCCTTAGATCCACATGTTAATGCTTTTCTTTCTCAAATTGGAGAAGTTTTCAGTAATTTATTCAAGTATTTTCCCCTTTATCTCCCTTCCTTCCTTTTGGGACTCCCACTTATTTTTACTGGTACACTTGATATGGCACACTTTATTGGTACCACTTTCTGGTGCCCCAGAAGTCGCCAGGATTTTCTTCATTTTTCTGTAATATTCTTCTTCTCTGTTTTCTAGAATAGACAAGTTTTATTTACCTATTTTCAATTTTACCAATTCTGTCTTCAGCTTTATCACTATTCTTTTTGGTCTAACCAATACATTTTTCATTTCAGGTATTGTATTTTTATCTCCAAATATTCTTTTTTTTCCAAGAAAAAATTGCTATAAGGATTTATTGGAGAAATTGATGAAATTTGAATATAATCAATATATTAGAAAATAATGTTGCACAAATGTTTTCTAGTTTTGATAATTGTACCTTGATAAAGTGACATGATATGTGCAATTTATTCTTTTTAAAATTATTATTTTTTCAGTATTCCTCTTTTATTATTATACTTTAAGTTCTAGGGTACATGTGCACAACGTGCAGGTTTGATACATATGTATACATGTGCCATGTAGTTTTATCTCCAAATACTCTATCTGGTTCTTTAAAAAATATATATTAAAATTTTTTTCCATTTGGTAAGATATTGGTAAGCTAATGACTGGATCCCAGGGTTTGTATCAAATGTCTTATTGGCCTTCTCATTTACGTATTTTTAGCTGATGGTGTAAACTCAATTGTGATTTTCACTTCCTATTTGAAATCTATAAAAGACATATTTGGGGAATCTTGTCCATCTTCATCCTTAGATAGCAGAAAAATACACTATATTTGGGGAAAAAAAAGTAGTTTTATAATTGCTTTCCACCCCTCCTCTTCCCTACCACCTTCCCCCAACAAAGCCTTTCGCACTGTAGAGGATTATTTTGCTTTTTCAGAGATGCTCTCCTATTCAACTCAGGCTACAGTAAAAAACAAAGAAATAACAACAACAAAAACCTCAAAACTTAGACTGGGTGGCCTAAGTGACAGAAATTTATTTTCTGACAGTTCTGGAGACAAGAAGTCCAAGATCAAGATACTTTCTGATTCAGCTTCTAGTTAGGTCTCTCTTCCTGGCTTGTAGGCAGCCACCATCTTCTGTCTGCTCACATGACCTCTTGTTTGTGAGCATAGAGGAGACAGAGAAAAAAAAAAAAAAGAGGGAGAGTGAGTGAGCATACACTTTTGCGTCTCTTCTTATAAGGGCACTAACCCCCTCCCTTATAACCTTATCTAATCTTAATTTTCTTCCAAAGTTGTTGTCTCTAAATATCATCACACTGGGAGTTAGAGCTTCAATATATGAATTTTGAGAGATACAATTCAGTTCCTAGCAGATGCATTGTTCTGTAATAAGTATTACAATAATGTTCTTCTCTTGCTATGGCCACAGATTGGCTAAAAAAATAATCTCAAAGGCTATTCTATAGACCAAGGAACTATAAAAATTAAGTAATAACAGATAGCAACAGCCTTAAAAAAGACACAGATGTTTCATGAGCATTTCAAAGAGTAAGCCAAAGAGAGAGTACCATGTCTTAAATTATTCTGTAATAGATTATTGGGAGTTCCAAATTAGTTCTTTGGAAGATATGTTGTAAAAATTTTTGCAAGGTAATTTTTATTTTTCTTTTAAAAATAAATCTAAACTTTATCACTAAGAAACAACAAAAGGAAAAGAATTCAAATAAATAAATAAATAAATAACAAGAACAACAATATGAACAAGTAAAATATGAATAAATAAATAGCACTATTAATAATAAAATTATCAATCAATAAATAGCATTCCAAAAATAAGAACATTAGAGCAATAATGTCATGCTAAGTCAGAGCTATAGATCTTTGGTTCCTCAAAGCTTGAGAATGATGTTAATTTATCTCTAGCCTGCTTTGGAATCCCTTAGGTCATTAACTATTTTTTCTGATAATTTTACTTGCATCATTCTCCTAAATAAGATCCTATGGGACAGAGGGGACAGAGTGACTGTCAAAACCCTATATTCTGTTGCTGTCCAAACCCACTTGGAGAGGAAATAGGAACACCTTTTACCCAAGTAAGTTCAAATAATATGTTTCAAAATTAAGGTCAAGATAAGCATTTTAAAAATAAAGTAGCATAGAATATAATGAACTTTATAACATTTTAGATGGCATTTTCTGAAATAAGGCTAATGTTTTCTATAATTTTATTTCTGTTATATATGTATGCGTTATATAAAATATATTTCTTATTGGTATGAGATGAAAAAGAAAGTTTGGGAATACCAAGATAAAATTTATTAGGCTGCTTGGAAAAGTTGGACACTTAATTGACTAGATTGCAATTTACATTAAAACTGTCCTTCCTATTTTTGCCCATATAAAAAGTGAGCACATCAAAACCAAGTCATCAATATGTCATCTAATGTGTTTGTTATAAGTAAAGAACATTAATTGTGAACCAGTGAAATAAATATTGAAAGGTTCTTGCAAAAATTTAATTATTAATTTCCCATTACCAAGCATCTAGAAGGGGCTACATTAAGACATTAATTAAAATTTCATGGCGTCCACCCATGGACTCAGCAGTCTATCAAAATAAAATATATGAAAACAGATGTTTGCCATATATGTGACATAGGTAAATGAATTATGTATACAATGTTTCTAGAACACAAAGATGAAAGATGGTAACACAGCATGAAAACTAGAAATCAGGGAAGCCTTGAAGAATAAATAGTTTTCACTGCAGCTCTCCATTCGCCATTCATCTGGTAGAGGTAAGTGTAAGCAAAAGCACATATAAAGCCTGGGTAACGTGTAAGGGCATGTTGTATTTGAGGACTGTAAAATAAGGTTTTTAATTGATCACTGGGTGTTGTTTGAGGAAGAAGGGAAGAGATGTTGCTGGAATTTTGATGGAAAACATCATGGACTATATTGTAAAAGGTCATGTATAATATTTTTTCAAATATAATGTACATTCTACCTTTGAGATGAGATAAAGTGGTACTTCAAGGTGAGATAATAAATGTCTTATAGTTGTCAAACAGTGCAGCCTTACCTGAAATCTCCAGACATGAAAACTAAATTTCCTATCAAATTGTTGCTTAATCATCTCAAAACAAAATTTATGTATTTGTATGAACACCAAAAAGTCTTTAAAAACTTTGATGATGCACATATTTCATGTAACAATAAGCAGCAGCAGCAGTAATAATAAATATTATCTGTTGTTATCTTCTTCATAGAAAGTGGTAGAAACATACATGCACACATACTCAAAAATATTCATTTTTGATTTTCATGTCCATGATTTATAAAGAACATCTAAATTTTCCTGATATATTCCCCTGCTGTTTCCTGAAATAATAAAAATATATCAATTAGGTTTCTTTTGTTAATTTATTATTTGCTGAGATTATATTTCAGGAACTAAAATTTTAAGACACTTTTCTCTGTATTCAACTTAAAAGGTACATTACGTGTAAAAGTTTACCTATACCTATCTACTTGCATTACTTAAGGATTTTCCATGTGTTCTTACTTTTTTGTATTTATTTCCTCAGACTTTTCTATGTTCAAGGCCTAGAGGTATATTACCTTGACCACCCATACATACTATGTATGTAGAAGTCAGCATAATCACTTTTAAAATTCATTGACAGCTGGGTGGTAAAGTGATTCTGCTGACTTATACATACGTGTAACTTTTAATACATCAGGGAAGCAAGTTTTATGGTTTAATATTATTTTCTAATTTAAAATATATTTATACCTGTTATGTGCAGGAGATAACTTTCTTTTGATAGTAACAATGATTATTTCAGATAGAAAATAACACCTTTTATAGATTAGGAAGCTTAAAGAACAAACTGAATTTTTGATGTGCCAAAGTTTATGTAACTAGAGAATGATAGAAATAAATTCCAGGTCTCCCAGTTTTATCTAGAGTTCTTTCCACTGTATCCTGCTTGACTTAAATACCTACAAAATGCCATTTTTCAATAGTTACCTGCCATTAAAATGCAACTGTTTATCACAAAAATGCTAAGTTTGTCAAAATTCACTATATTTACTTCCTCATAGCCATAATGGCAATTTACATTCACTTTTTAAGGGTAATTGAATACTATTTGGCCACAAAAAAAGAATGAAATCATGTCTTTTGCAGCAACATGGATGGAAATGGAGGCCATTATCTTAGTGAAGTAACTCAGAAAGTAAAACACCACATGTTCTCACTTATAAGCGGGAGCTAAATAATATGTACACATGGACATAGTATGTAAAGTACCTTTATAAATATAATAAATTTATGCAGAGAGAAATATGTGTTCCCACAAAATAACCTCTTTTACCTTTCATCCCATCCCATCCCATCCCCAGACCTCAAGTGAGCTAATAATTTTAATACTAAATTAGCACTTACATATTAACAATAAAATTGATTTTAAGGATATTAAGGTATTAAAAAATTATACAAATGTTAAGCTTGATTAAACTCTCCTCTTTTTATCCAGACAACCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7489:HG2_PB_PB10Xdip_5971:HG2_PB_SVrefine2PB10Xhap12_8889:HG3_Ill_SVrefine2DISCOVARDovetail_8972:HG3_PB_SVrefine2PBcRDovetail_5763:HG4_PB_SVrefine2Falcon1Dovetail_7521:HG4_Ill_SVrefine2DISCOVARDovetail_8740:HG2_PB_SVrefine2Falcon2Bionano_6004:HG2_Ill_SVrefine2DISCOVARplusDovetail_2132:HG2_10X_SVrefine210Xhap12_8622:HG2_PB_SVrefine2Falcon1plusDovetail_1916;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8622:HG2_Ill_SVrefine2DISCOVARplusDovetail_2132:HG2_PB_SVrefine2Falcon2Bionano_6004:HG4_Ill_SVrefine2DISCOVARDovetail_8740;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00858256;ClusterMaxSizeDiff=0.00858256;ClusterMaxEditDist=0.0203381;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=7605;DistBack=23480;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=935;REFWIDENED=11:56143092-56144026;PctSeqSimilarity=0.9964;PctSizeSimilarity=1;PctRecOverlap=0.937;SizeDiff=0;StartDistance=-479;EndDistance=-479;GTMatch=0;TruScore=97;MatchId=891.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:89:1/1:0:37:1:42:./.:0:0:0:0:./.:2:2:1/1:1:460:.:7344:.
chr11	56303346	HG2_Ill_MetaSV_799	T	TAAAAACTTTTACTATAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTAAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGCCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8623:HG2_PB_pbsv_12351:HG3_PB_pbsv_12030:HG4_PB_assemblyticsfalcon_4247:HG3_PB_assemblyticsfalcon_4353:HG2_PB_PB10Xdip_5972:HG2_Ill_manta_3447:HG4_PB_pbsv_12331:HG2_PB_HySA_22391:HG2_PB_HySA_22390:HG3_PB_HySA_18551:HG4_PB_SVrefine2Falcon1Dovetail_7522:HG3_Ill_MetaSV_873:HG4_Ill_MetaSV_827:HG4_Ill_GATKHCSBGrefine_8530:HG2_Ill_MetaSV_799:HG2_Ill_GATKHCSBGrefine_8295:HG2_PB_HySA_22389:HG2_Ill_breakscan11_4283:HG3_PB_SVrefine2Falcon1Dovetail_7490:HG2_PB_assemblyticsfalcon_4349:HG4_PB_HySA_17918:HG2_PB_HySA_22388:HG2_PB_SVrefine2PBcRplusDovetail_1826:HG2_PB_SVrefine2PB10Xhap12_8890:HG2_PB_SVrefine2Falcon2Bionano_6005:HG3_PB_SVrefine2PBcRDovetail_5764:HG2_PB_SVrefine2Falcon1plusDovetail_1917;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8295:HG2_Ill_MetaSV_799:HG4_Ill_GATKHCSBGrefine_8530:HG4_Ill_MetaSV_827;NumExactMatchSVs=4;ClusterMaxShiftDist=0.167722;ClusterMaxSizeDiff=0.167722;ClusterMaxEditDist=0.218354;PBcalls=20;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=313;DistBack=-17;DistForward=7676;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=11:56303343-56303363;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.966;PctRecOverlap=0.9631;SizeDiff=-11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=892.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:45:1/1:1:26:1:13:1/1:1:7:0:17:1/1:0:22:1/1:2:76:.:.:.
chr11	56793191	HG4_Ill_SVrefine2DISCOVARDovetail_8742	T	TTTATATATTATATAAATAAATATATATATAATATATAAATATATATATTTATATAATATATATTATATATAATATATATTATATAATATATAATATATAATAAAATATATTATATATTTATATTATATTTTATATAAATATATAATATATAATAAAATATATTATATATTTAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7524:HG2_Ill_manta_3448:HG3_Ill_SVrefine2DISCOVARDovetail_8974:HG3_PB_pbsv_12032:HG3_Ill_scalpel_11839:HG3_Ill_GATKHC_19610:HG3_Ill_GATKHCSBGrefine_8185:HG3_Ill_150bpfermikitraw_15519:HG2_Ill_GATKHC_19764:HG2_Ill_GATKHCSBGrefine_8297:HG4_Ill_scalpel_11342:HG4_Ill_scalpel_11341:HG2_PB_pbsv_12354:HG2_PB_SVrefine2Falcon2Bionano_6008:HG4_PB_pbsv_12334:HG2_PB_SVrefine2Falcon1plusDovetail_1920:HG3_PB_SVrefine2PBcRDovetail_5767:HG3_PB_SVrefine2Falcon1Dovetail_7493:HG4_PB_SVrefine2PBcRDovetail_6206:HG4_Ill_SVrefine2DISCOVARDovetail_8742:HG2_PB_SVrefine2PBcRplusDovetail_1829:HG2_PB_SVrefine2PB10Xhap12_8892:HG2_Ill_SVrefine2DISCOVARplusDovetail_2136;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2136:HG2_PB_SVrefine2PB10Xhap12_8892:HG2_PB_SVrefine2PBcRplusDovetail_1829:HG4_Ill_SVrefine2DISCOVARDovetail_8742:HG4_PB_SVrefine2PBcRDovetail_6206;NumExactMatchSVs=5;ClusterMaxShiftDist=0.143266;ClusterMaxSizeDiff=0.143266;ClusterMaxEditDist=0.23796;PBcalls=11;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=173;DistBack=128674;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=287;REFWIDENED=11:56793192-56793478;PctSeqSimilarity=0.9689;PctSizeSimilarity=0.9611;PctRecOverlap=0.5359;SizeDiff=-7;StartDistance=-80;EndDistance=-80;GTMatch=0;TruScore=82;MatchId=895.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:1/1:0:42:1:23:./.:0:4:0:1:0/1:6:30:./.:.:.:.:.:.
chr11	57143568	HG2_PB_SVrefine2PBcRplusDovetail_1830	G	GCTCCCATCCCCCACTCCCCCAGTCCTTACCCATACTCCCAACCCCTCCCTCCATCACACCCAACCCTACTCCCATCCCCACCACCATCTCCACCACCTCTACTCCCACCCCCCACTCCCCAATCCTTACCCATACTCCCAACCCCTCACCTCTATCACACCCATCCCTACTCCCATCCCCCATCTCCCACCCCTAACCCTAATCCCAACCCCTCACCTGCACCACACCCATCCCTACTTCCATCCCCCCATCTCCCACCCCACCCCTACTCCTAACCCCTCACGTCCCCACTCCCACCCCTACTCCCATCCCCCCACCTCCCACCCCCACCCCTACTTCCAACCCCTCACCTGCACCACACCATCCCTAAACCCATCCCCCCACCCCTACTCCCATCCCCCCACCTCCCACTCCCACCCCTACTCCCAACCCCCCACCTCCCACCCACACCCCTACTCCCATCCCCCACCTCCCCACTCCCACCCCTACTCCCATCCCCACCACCATCTCCCCCACCCCTACTCCCAACCCCTCACCTCCACCACACCCATCTCTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1921:HG2_PB_HySA_22395:HG2_PB_pbsv_12355:HG2_PB_PB10Xdip_5979:HG2_PB_HySA_22394:HG3_PB_HySA_18557:HG4_PB_HySA_17923:HG4_PB_pbsv_12335:HG3_PB_pbsv_12033:HG3_PB_SVrefine2PBcRDovetail_5768:HG2_PB_SVrefine2PB10Xhap12_8893:HG2_PB_SVrefine2Falcon2Bionano_6009:HG2_PB_SVrefine2PBcRplusDovetail_1830:HG4_PB_SVrefine2PBcRDovetail_6207:HG4_PB_SVrefine2Falcon1Dovetail_7525:HG3_PB_SVrefine2Falcon1Dovetail_7494;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_1830;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0447628;ClusterMaxSizeDiff=0.0447628;ClusterMaxEditDist=0.275612;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=556;DistBack=1643;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=430;REFWIDENED=11:57143569-57143998;PctSeqSimilarity=0.9566;PctSizeSimilarity=0.9841;PctRecOverlap=0.2319;SizeDiff=-9;StartDistance=-430;EndDistance=-430;GTMatch=0;TruScore=72;MatchId=896.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:1:20:1:11:./.:7:20:4:23:./.:1:1:./.:2:19:.:548:.
chr11	57774111	HG2_PB_SVrefine2PB10Xhap12_8894	T	TAAAAATTATGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_5980:HG2_PB_assemblyticsfalcon_4360:HG4_PB_assemblyticsfalcon_4256:HG3_PB_assemblyticsfalcon_4364:HG3_PB_HySA_18564:HG4_PB_pbsv_12337:HG2_PB_HySA_22402:HG2_PB_pbsv_12357:HG2_Ill_MetaSV_800:HG4_PB_SVrefine2Falcon1Dovetail_7526:HG3_PB_SVrefine2PBcRDovetail_5769:HG3_PB_SVrefine2Falcon1Dovetail_7495:HG2_PB_SVrefine2PBcRplusDovetail_1832:HG2_PB_SVrefine2PB10Xhap12_8894:HG3_Ill_GATKHCSBGrefine_8187:HG2_PB_SVrefine2Falcon2Bionano_6011:HG2_PB_SVrefine2Falcon1plusDovetail_1922:HG2_10X_SVrefine210Xhap12_8626:HG4_PB_HySA_17929:HG3_PB_HySA_18563:HG2_PB_HySA_22401;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8894:HG2_PB_SVrefine2PBcRplusDovetail_1832:HG3_PB_SVrefine2Falcon1Dovetail_7495:HG3_PB_SVrefine2PBcRDovetail_5769:HG4_PB_SVrefine2Falcon1Dovetail_7526;NumExactMatchSVs=5;ClusterMaxShiftDist=0.109489;ClusterMaxSizeDiff=0.10219;ClusterMaxEditDist=0.213523;PBcalls=18;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=133;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=11:57774112-57774121;PctSeqSimilarity=0.9889;PctSizeSimilarity=0.9779;PctRecOverlap=0.9708;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=897.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:2:21:2:31:1/1:0:14:0:16:1/1:0:15:./.:.:.:.:.:.
chr11	57907336	HG2_Ill_250bpfermikitraw_16469	C	CTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1924:HG2_PB_pbsv_12359:HG2_PB_HySA_22405:HG4_PB_pbsv_12340:HG4_Ill_svaba_15420:HG4_Ill_Krunchall_17066:HG4_Ill_GATKHC_19741:HG4_Ill_GATKHCSBGrefine_8533:HG4_Ill_250bpfermikitraw_16300:HG2_Ill_svaba_15368:HG2_Ill_SVrefine2DISCOVARplusDovetail_2139:HG2_Ill_GATKHC_19777:HG2_Ill_GATKHCSBGrefine_8300:HG2_Ill_250bpfermikitraw_16469:HG2_10X_SVrefine210Xhap12_8627;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8627:HG2_Ill_250bpfermikitraw_16469:HG2_Ill_GATKHCSBGrefine_8300:HG2_Ill_GATKHC_19777:HG2_Ill_SVrefine2DISCOVARplusDovetail_2139:HG2_Ill_svaba_15368:HG4_Ill_250bpfermikitraw_16300:HG4_Ill_GATKHCSBGrefine_8533:HG4_Ill_GATKHC_19741:HG4_Ill_Krunchall_17066:HG4_Ill_svaba_15420;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0895522;ClusterMaxSizeDiff=0.0597015;ClusterMaxEditDist=0.294118;PBcalls=4;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=65;DistBack=-65;DistForward=14292;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=11:57907337-57907402;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=898.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:21:1|0:6:18:31:1:0|1:10:0:1:23:0/1:26:23:./.:.:.:.:.:.
chr11	57967333	HG2_PB_SVrefine2PB10Xhap12_8896	T	TGAAAATGGCAAATTGTTAAAAAATCAAATGATTTTTTAACAAGTGCAGAAACAAAAAGATACTGGTTGCATTGTAACTCATGCAACATCCTTTTTTTTAGAAAAGAAAAACACAGATTTGGCCTTCGCACATTTTTTGCAAAGAACAGAAGGTATTTTTTTCTGTAGTGTGATCACAATGAAAACTTTATTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7497:HG2_PB_pbsv_12360:HG2_PB_PB10Xdip_5982:HG2_PB_assemblyticsfalcon_4365:HG4_PB_assemblyticsfalcon_4259:HG3_PB_assemblyticsfalcon_4367:HG4_PB_pbsv_12341:HG3_PB_pbsv_12037:HG2_PB_HySA_22406:HG3_PB_SVrefine2PBcRDovetail_5771:HG2_PB_SVrefine2PBcRplusDovetail_1834:HG2_PB_SVrefine2PB10Xhap12_8896:HG2_PB_SVrefine2Falcon2Bionano_6013:HG2_PB_SVrefine2Falcon1plusDovetail_1925:HG4_PB_SVrefine2Falcon1Dovetail_7528;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8896:HG2_PB_SVrefine2PBcRplusDovetail_1834;NumExactMatchSVs=2;ClusterMaxShiftDist=0.174098;ClusterMaxSizeDiff=0.174098;ClusterMaxEditDist=0.271255;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=239;DistBack=45679;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:57967334-57967348;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9917;PctRecOverlap=0.9917;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=899.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:./.:0:4:0:3:./.:0:7:0:5:1/1:0:19:./.:.:.:.:.:.
chr11	58165360	HG4_Ill_manta_2928	A	AAAGTAAGGACATATTCTAAATAAAATAAAAACAAAACACAAACGATGAACAATGTCAAAGGAACATAAGGCCTTCTGAAAGAGCTTCAAAGGATGAAAGTGGAAACATTGAGACCGAAAAAATTAAAACAAAAACCTAGTATTGCCTTATAATCCAAAGTATAAAGTAAACAAACAAGAACACACTAATATAAATG	20	PASS	ClusterIDs=HG3_PB_pbsv_12039:HG4_PB_pbsv_12342:HG2_PB_assemblyticsfalcon_4367:HG4_Ill_Spiral_987:HG3_Ill_Spiral_12830:HG2_Ill_breakscan11_4284:HG2_Ill_Spiral_851:HG4_PB_SVrefine2PBcRDovetail_6209:HG4_PB_SVrefine2Falcon1Dovetail_7529:HG4_Ill_svaba_15423:HG4_Ill_manta_2928:HG4_Ill_SVrefine2DISCOVARDovetail_8745:HG4_Ill_MetaSV_830:HG4_Ill_GATKHCSBGrefine_8535:HG4_Ill_Cortex_593:HG4_Ill_250bpfermikitraw_16303:HG4_Ill_150bpfermikitraw_15670:HG3_PB_SVrefine2PBcRDovetail_5772:HG3_PB_SVrefine2Falcon1Dovetail_7498:HG3_Ill_svaba_15523:HG3_Ill_manta_2814:HG3_Ill_MetaSV_875:HG3_Ill_GATKHCSBGrefine_8189:HG3_Ill_Cortex_631:HG2_Ill_svaba_15370:HG2_Ill_Cortex_1444:HG2_10X_SVrefine210Xhap12_8628:HG2_PB_pbsv_12361;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8628:HG2_Ill_Cortex_1444:HG2_Ill_svaba_15370:HG3_Ill_Cortex_631:HG3_Ill_GATKHCSBGrefine_8189:HG3_Ill_MetaSV_875:HG3_Ill_manta_2814:HG3_Ill_svaba_15523:HG3_PB_SVrefine2Falcon1Dovetail_7498:HG3_PB_SVrefine2PBcRDovetail_5772:HG4_Ill_150bpfermikitraw_15670:HG4_Ill_250bpfermikitraw_16303:HG4_Ill_Cortex_593:HG4_Ill_GATKHCSBGrefine_8535:HG4_Ill_MetaSV_830:HG4_Ill_SVrefine2DISCOVARDovetail_8745:HG4_Ill_manta_2928:HG4_Ill_svaba_15423:HG4_PB_SVrefine2Falcon1Dovetail_7529:HG4_PB_SVrefine2PBcRDovetail_6209;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.221675;PBcalls=8;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=196;DistBack=1546;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=11:58165361-58165361;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=900.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:22:0|1:36:2:2:18:0|1:26:0:1:30:0/1:30:25:./.:.:.:.:.:.
chr11	58171837	HG4_PB_SVrefine2PBcRDovetail_6211	T	TAAAAATGCTAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCTGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_17932:HG4_PB_pbsv_12344:HG2_PB_pbsv_12363:HG3_PB_pbsv_12041:HG3_PB_HySA_18568:HG3_PB_SVrefine2PBcRDovetail_5774:HG2_PB_SVrefine2Falcon1plusDovetail_1927:HG4_Ill_MetaSV_831:HG4_PB_SVrefine2PBcRDovetail_6211:HG3_PB_SVrefine2Falcon1Dovetail_7500:HG4_PB_SVrefine2Falcon1Dovetail_7531;NumClusterSVs=11;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_6211;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0802329;ClusterMaxSizeDiff=0.0795859;ClusterMaxEditDist=0.222712;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1499;DistBack=-1;DistForward=48769;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=11:58171838-58171849;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9993;PctRecOverlap=0.9987;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=901.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:21:0|1:38:0:0:21:0|1:18:0:0:8:0/1:26:12:0/1:50:160:.:.:.
chr11	58977348	HG2_PB_assemblyticsfalcon_4370	T	TGTGTGTGTTCATATAACAGGAGGACAGGAAAGGTAAGGACCCAGAACAATGAAGACTTATTGAAATGTGGGGGG	10	PASS	ClusterIDs=HG2_PB_HySA_22412:HG2_PB_pbsv_12365:HG4_PB_pbsv_12346:HG2_PB_assemblyticsfalcon_4370:HG4_PB_assemblyticsfalcon_4265:HG3_PB_pbsv_12045:HG3_PB_assemblyticsfalcon_4372:HG4_PB_HySA_17935:HG3_PB_HySA_18575;NumClusterSVs=9;ExactMatchIDs=HG2_PB_assemblyticsfalcon_4370;NumExactMatchSVs=1;ClusterMaxShiftDist=0.245399;ClusterMaxSizeDiff=0.208589;ClusterMaxEditDist=0.369048;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=74;DistBack=5;DistForward=6;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=210;REFWIDENED=11:58977190-58977399;PctSeqSimilarity=0.9934;PctSizeSimilarity=0.9867;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=902.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:35:./.:21:7:1:30:./.:40:1:5:33:0/1:12:11:./.:.:.:.:.:.
chr11	59124150	HG2_PB_SVrefine2Falcon2Bionano_6015	A	AGAGGAGAGGGGAGGGGAGGGAAGGGAAAGGGAGGGAAGGGAAGGGGAGGGGACGGAAGGGAAAGGGAGGGGAGGGGAGGGAAGGGGAGGGGAGGGGAGGGGGGGAGGGGAGGGGAGGGAAGGGAAGGGGAGGGGAGGGGGG	10	PASS	ClusterIDs=HG2_PB_pbsv_12367:HG2_PB_HySA_22419:HG3_PB_assemblyticsfalcon_4376:HG3_PB_SVrefine2Falcon1Dovetail_7504:HG3_PB_HySA_18578:HG4_PB_pbsv_12348:HG2_PB_PB10Xdip_5986:HG2_PB_PB10Xdip_5985:HG3_PB_HySA_18577:HG4_PB_SVrefine2Falcon1Dovetail_7535:HG4_PB_assemblyticsfalcon_4269:HG2_PB_SVrefine2Falcon1plusDovetail_1929:HG2_PB_assemblyticsfalcon_4373:HG4_PB_SVrefine2PBcRDovetail_6215:HG3_PB_SVrefine2PBcRDovetail_5779:HG2_PB_SVrefine2PBcRplusDovetail_1838:HG2_PB_SVrefine2PB10Xhap12_8899:HG2_PB_SVrefine2Falcon2Bionano_6015:HG3_PB_pbsv_12047;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6015:HG2_PB_SVrefine2PB10Xhap12_8899:HG2_PB_SVrefine2PBcRplusDovetail_1838:HG3_PB_SVrefine2PBcRDovetail_5779:HG4_PB_SVrefine2PBcRDovetail_6215;NumExactMatchSVs=5;ClusterMaxShiftDist=0.145329;ClusterMaxSizeDiff=0.145329;ClusterMaxEditDist=0.258993;PBcalls=19;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=141;DistBack=13649;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=11:59124151-59124170;PctSeqSimilarity=0.9966;PctSizeSimilarity=1;PctRecOverlap=0.9645;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=98;MatchId=903.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:1/1:0:14:0:11:./.:0:8:0:3:./.:1:3:./.:.:.:.:.:.
chr11	59412794	HG4_Ill_GATKHCSBGrefine_8540	A	AGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGCAGGGGTGGCCGGGCAGAGGCGCCCCCCACTTCCCGGACGGGGTGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGTGCCCCTCACCTCCCGGACGGGGCGGCTGGCTGGGCGGGGGGCTGACCCCCCCACATCCCTCCCTCCCGGACGGGGCGGCTGGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7536:HG4_PB_HySA_17939:HG4_PB_HySA_17938:HG2_PB_pbsv_12369:HG4_PB_pbsv_12350:HG2_PB_PB10Xdip_5988:HG3_PB_pbsv_12048:HG2_PB_PB10Xdip_5987:HG4_Ill_MetaSV_832:HG4_Ill_GATKHCSBGrefine_8540:HG3_Ill_GATKHCSBGrefine_8198:HG2_Ill_MetaSV_801:HG2_Ill_GATKHCSBGrefine_8305:HG3_Ill_MetaSV_878:HG2_PB_HySA_22423:HG3_PB_SVrefine2PBcRDovetail_5780:HG2_10X_SVrefine210Xhap12_8632:HG2_PB_SVrefine2PBcRplusDovetail_1839:HG2_PB_SVrefine2PB10Xhap12_8900:HG4_PB_SVrefine2PBcRDovetail_6216:HG2_PB_SVrefine2Falcon1plusDovetail_1930:HG2_PB_SVrefine2Falcon2Bionano_6016:HG3_PB_SVrefine2Falcon1Dovetail_7505;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8305:HG2_Ill_MetaSV_801:HG3_Ill_GATKHCSBGrefine_8198:HG4_Ill_GATKHCSBGrefine_8540:HG4_Ill_MetaSV_832;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0514801;ClusterMaxSizeDiff=0.0489061;ClusterMaxEditDist=0.239596;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=385;DistBack=-60;DistForward=6742;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=83;REFWIDENED=11:59412773-59412855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=904.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:./.:0:4:0:4:./.:0:0:1:0:1/1:0:16:1/1:2:83:.:.:.
chr11	60749595	HG2_Ill_GATKHC_19795	C	CGGTCTGTGCATGGGGCTGGGGACAGCAGATGCCCGAGTTGGCGGGGGGGGG	20	PASS	ClusterIDs=HG3_PB_HySA_18592:HG4_PB_pbsv_12356:HG2_PB_pbsv_12376:HG2_PB_PB10Xdip_6032:HG2_PB_HySA_22436:HG3_Ill_GATKHC_19642:HG2_Ill_scalpel_11672:HG2_Ill_GATKHC_19795:HG4_Ill_scalpel_11364:HG4_Ill_GATKHC_19766:HG4_Ill_GATKHCSBGrefine_8545:HG2_PB_assemblyticsfalcon_4380:HG3_PB_assemblyticsfalcon_4388;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHC_19795:HG2_Ill_scalpel_11672:HG3_Ill_GATKHC_19642;NumExactMatchSVs=3;ClusterMaxShiftDist=0.244898;ClusterMaxSizeDiff=0.204082;ClusterMaxEditDist=0.346939;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=27;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=79;REFWIDENED=11:60749540-60749618;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=905.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:0:23:0:19:1/1:1:10:1:5:1/1:0:14:./.:.:.:.:.:.
chr11	60758279	HG2_PB_SVrefine2PB10Xhap12_8905	CA	GGCTGAGGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACGTGGTGAAACCCCGTCTCTACTATATATATATATAATTTATATATAAATTTATATAAATTGGACCC	20	PASS	ClusterIDs=HG3_PB_pbsv_12056:HG4_Ill_SVrefine2DISCOVARDovetail_8753:HG3_Ill_GATKHCSBGrefine_8202:HG4_Ill_GATKHCSBGrefine_8546:HG2_Ill_GATKHCSBGrefine_8308:HG3_PB_SVrefine2PBcRDovetail_5786:HG3_Ill_Spiral_12846:HG3_Ill_SVrefine2DISCOVARDovetail_8987:HG2_PB_assemblyticsfalcon_4381:HG2_PB_SVrefine2Falcon1plusDovetail_1935:HG2_Ill_manta_3451:HG2_Ill_SVrefine2DISCOVARplusDovetail_2148:HG4_PB_assemblyticsfalcon_4283:HG4_PB_SVrefine2PBcRDovetail_6219:HG4_PB_SVrefine2Falcon1Dovetail_7540:HG3_PB_assemblyticsfalcon_4389:HG3_PB_SVrefine2Falcon1Dovetail_7509:HG2_PB_SVrefine2PBcRplusDovetail_1844:HG2_PB_SVrefine2PB10Xhap12_8905:HG2_PB_SVrefine2Falcon2Bionano_6019:HG2_PB_PB10Xdip_6033:HG2_10X_SVrefine210Xhap12_8638:HG4_Ill_MetaSV_833:HG3_Ill_MetaSV_881:HG2_Ill_MetaSV_802:HG2_PB_HySA_22437:HG3_PB_HySA_18593:HG2_PB_pbsv_12377:HG4_PB_pbsv_12357;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8638:HG2_PB_PB10Xdip_6033:HG2_PB_SVrefine2Falcon2Bionano_6019:HG2_PB_SVrefine2PB10Xhap12_8905:HG2_PB_SVrefine2PBcRplusDovetail_1844:HG3_PB_SVrefine2Falcon1Dovetail_7509:HG3_PB_assemblyticsfalcon_4389:HG4_PB_SVrefine2Falcon1Dovetail_7540:HG4_PB_SVrefine2PBcRDovetail_6219:HG4_PB_assemblyticsfalcon_4283;NumExactMatchSVs=10;ClusterMaxShiftDist=0.178723;ClusterMaxSizeDiff=0.178723;ClusterMaxEditDist=0.243478;PBcalls=17;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=118;DistBack=0;DistForward=2513;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:60758281-60758278;PctSeqSimilarity=0.9878;PctSizeSimilarity=0.9752;PctRecOverlap=0.9835;SizeDiff=-3;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=906.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:2:24:1:22:1/1:0:52:1:44:1/1:0:21:./.:.:.:.:.:.
chr11	61145201	HG4_Ill_MetaSV_834	T	TCATTCAGTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGCGCTATCCCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_12380:HG2_PB_PB10Xdip_6035:HG3_PB_pbsv_12060:HG4_PB_HySA_17955:HG3_PB_assemblyticsfalcon_4396:HG4_PB_assemblyticsfalcon_4291:HG3_PB_SVrefine2PBcRDovetail_5790:HG2_PB_HySA_22451:HG3_PB_SVrefine2Falcon1Dovetail_7511:HG4_PB_SVrefine2PBcRDovetail_6223:HG4_Ill_MetaSV_834:HG4_Ill_GATKHCSBGrefine_8548:HG3_Ill_MetaSV_885:HG3_Ill_GATKHCSBGrefine_8204:HG2_PB_SVrefine2PBcRplusDovetail_1847:HG2_PB_SVrefine2PB10Xhap12_8907:HG2_PB_SVrefine2Falcon2Bionano_6022:HG2_Ill_manta_3453:HG2_Ill_MetaSV_803:HG2_10X_SVrefine210Xhap12_8640:HG4_PB_SVrefine2Falcon1Dovetail_7542:HG2_PB_SVrefine2Falcon1plusDovetail_1939:HG4_PB_pbsv_12360:HG2_Ill_breakscan11_4285;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8640:HG2_Ill_MetaSV_803:HG2_Ill_manta_3453:HG2_PB_SVrefine2Falcon2Bionano_6022:HG2_PB_SVrefine2PB10Xhap12_8907:HG2_PB_SVrefine2PBcRplusDovetail_1847:HG3_Ill_GATKHCSBGrefine_8204:HG3_Ill_MetaSV_885:HG4_Ill_GATKHCSBGrefine_8548:HG4_Ill_MetaSV_834:HG4_PB_SVrefine2PBcRDovetail_6223;NumExactMatchSVs=11;ClusterMaxShiftDist=0.149682;ClusterMaxSizeDiff=0.149682;ClusterMaxEditDist=0.219136;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=311;DistBack=37076;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=11:61145202-61145214;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=907.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:0:20:0:5:./.:0:3:0:2:1/1:0:21:1/1:2:89:.:.:.
chr11	61777071	HG2_PB_SVrefine2PB10Xhap12_8910	A	ACCAGCCTGGGCAACGCAGCTAGACATCGTCTCTATAAATAATAAAACGTTAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGGAGGCTGAAGTGGGTGGATCACCTGAGGCCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAACCCCATTTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCAGGTGCCTGTCATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTCAGGAGTCAGAGGTTGCAGTGAGCCGAGATCATGCCACTGCACTCCAGCCTGGGCAACACACAGCAAGACTCCATCTCAAAAAAAAAAAAAAACGTTTTGGGCAGGGTGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCTAGGCAGGTGGATCACTAGGTCAGGAGATCGAGACCATCCTGACTAACATGGTGAAACCCCGTCTCTACTAAATGTACAAAAAATTAGCCGGGCATGATGGCAGGTGCCTGTAGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGACGGAGCTTGCAGTGAGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGAAGTCCCAGCTACTCAGGAATCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGGTTGAGACTGCAGTGAGCTATACTGGTGCCACTGCCCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5793:HG2_PB_pbsv_12383:HG3_PB_pbsv_12063:HG3_PB_HySA_18613:HG4_PB_pbsv_12362:HG2_PB_HySA_22464:HG2_PB_PB10Xdip_6037:HG2_PB_PB10Xdip_6036:HG2_PB_HySA_22463:HG2_PB_SVrefine2PBcRplusDovetail_1850:HG2_PB_SVrefine2PB10Xhap12_8910:HG2_PB_SVrefine2Falcon2Bionano_6024:HG4_PB_SVrefine2PBcRDovetail_6225:HG2_PB_SVrefine2Falcon1plusDovetail_1942:HG3_PB_SVrefine2Falcon1Dovetail_7513:HG4_PB_SVrefine2Falcon1Dovetail_7544;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6024:HG2_PB_SVrefine2PB10Xhap12_8910:HG2_PB_SVrefine2PBcRplusDovetail_1850;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0771663;ClusterMaxSizeDiff=0.0746363;ClusterMaxEditDist=0.235294;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=777;DistBack=21088;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1117;REFWIDENED=11:61777072-61778188;PctSeqSimilarity=0.9844;PctSizeSimilarity=0.9949;PctRecOverlap=0.5946;SizeDiff=4;StartDistance=-313;EndDistance=-313;GTMatch=0;TruScore=85;MatchId=908.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:2:29:1:20:1/1:0:13:0:23:1/1:0:27:./.:6:58:.:790:.
chr11	62153911	HG4_Ill_SVrefine2DISCOVARDovetail_8760	T	TTATCATAGATATGTACATATCATACATATCATAGATATGTACATATCATACATATCATAGATATGTACATATCATACATATCATAGATATGTACATATCATACA	20	PASS	ClusterIDs=HG2_PB_pbsv_12389:HG2_PB_HySA_22473:HG2_PB_HySA_22472:HG3_PB_pbsv_12071:HG2_PB_HySA_22471:HG2_PB_SVrefine2PB10Xhap12_8914:HG4_PB_pbsv_12368:HG4_PB_SVrefine2PBcRDovetail_6227:HG4_PB_SVrefine2Falcon1Dovetail_7547:HG3_PB_SVrefine2Falcon1Dovetail_7516:HG2_PB_SVrefine2PBcRplusDovetail_1853:HG2_PB_SVrefine2Falcon1plusDovetail_1945:HG2_Ill_SVrefine2DISCOVARplusDovetail_2158:HG4_Ill_SVrefine2DISCOVARDovetail_8760:HG4_Ill_Krunchall_17102:HG4_Ill_250bpfermikitraw_16337:HG2_Ill_Krunchall_16823:HG2_Ill_GATKHCSBGrefine_8314:HG3_Ill_GATKHC_19665:HG2_PB_PB10Xdip_6055:HG2_PB_PB10Xdip_6056;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8314:HG2_Ill_Krunchall_16823:HG4_Ill_250bpfermikitraw_16337:HG4_Ill_Krunchall_17102:HG4_Ill_SVrefine2DISCOVARDovetail_8760:HG4_PB_SVrefine2PBcRDovetail_6227;NumExactMatchSVs=6;ClusterMaxShiftDist=0.293333;ClusterMaxSizeDiff=0.293333;ClusterMaxEditDist=0.310345;PBcalls=14;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=104;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=11:62153912-62153980;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=909.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:57:1/1:1:9:1:16:1/1:0:20:0:18:1/1:0:51:./.:.:.:.:.:.
chr11	62551480	HG3_Ill_Spiral_12867	C	CGACAGTGTGAGACTCTGTCTGGAAAAAAAAAAAAAAGAATATATATATATTCTTTTTTTTTTTTTTCCA	20	PASS	ClusterIDs=HG2_PB_pbsv_12390:HG2_PB_PB10Xdip_6057:HG4_PB_pbsv_12369:HG3_PB_HySA_18625:HG3_PB_pbsv_12073:HG4_PB_HySA_17967:HG2_PB_assemblyticsPBcR_4264:HG4_PB_assemblyticsfalcon_4312:HG4_PB_SVrefine2PBcRDovetail_6228:HG4_Ill_manta_2935:HG4_Ill_SVrefine2DISCOVARDovetail_8761:HG4_Ill_GATKHC_19788:HG4_Ill_GATKHCSBGrefine_8552:HG3_Ill_Spiral_12867:HG3_Ill_GATKHC_19671:HG3_Ill_GATKHCSBGrefine_8210:HG2_PB_SVrefine2PBcRplusDovetail_1854:HG2_PB_SVrefine2PB10Xhap12_8915:HG2_PB_SVrefine2Falcon1plusDovetail_1946:HG2_Ill_manta_3456:HG2_Ill_SVrefine2DISCOVARplusDovetail_2160:HG2_Ill_GATKHC_19822:HG2_Ill_GATKHCSBGrefine_8315:HG4_PB_SVrefine2Falcon1Dovetail_7549:HG3_PB_assemblyticsfalcon_4414:HG2_PB_HySA_22481;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8315:HG2_Ill_GATKHC_19822:HG2_Ill_SVrefine2DISCOVARplusDovetail_2160:HG2_Ill_manta_3456:HG2_PB_SVrefine2Falcon1plusDovetail_1946:HG2_PB_SVrefine2PB10Xhap12_8915:HG2_PB_SVrefine2PBcRplusDovetail_1854:HG3_Ill_GATKHCSBGrefine_8210:HG3_Ill_GATKHC_19671:HG3_Ill_Spiral_12867:HG4_Ill_GATKHCSBGrefine_8552:HG4_Ill_GATKHC_19788:HG4_Ill_SVrefine2DISCOVARDovetail_8761:HG4_Ill_manta_2935;NumExactMatchSVs=14;ClusterMaxShiftDist=0.202899;ClusterMaxSizeDiff=0.202899;ClusterMaxEditDist=0.26087;PBcalls=15;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=4031;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=11:62551481-62551485;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=910.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:27:./.:1:6:0:4:./.:0:8:0:4:1/1:0:24:./.:.:.:.:.:.
chr11	62860001	HG2_Ill_GATKHCSBGrefine_8318	C	CATGGTACTGATATATATATATATATATATATATATATATATATATATATATATATATGGAACAGAACAGAGACCTCAGAA	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_4269:HG3_PB_pbsv_12076:HG4_PB_pbsv_12371:HG2_PB_pbsv_12393:HG4_PB_assemblyticsfalcon_4315:HG3_Ill_GATKHCSBGrefine_8214:HG2_Ill_manta_3457:HG2_Ill_GATKHC_19828:HG2_Ill_GATKHCSBGrefine_8318:HG2_10X_SVrefine210Xhap12_8645:HG2_PB_SVrefine2Falcon1plusDovetail_1948:HG4_PB_SVrefine2PBcRDovetail_6230:HG2_PB_SVrefine2PBcRplusDovetail_1856:HG2_PB_SVrefine2PB10Xhap12_8916:HG3_Ill_manta_2822:HG3_Ill_SVrefine2DISCOVARDovetail_9003:HG3_Ill_Krunchall_16515:HG4_PB_SVrefine2Falcon1Dovetail_7551:HG4_Ill_manta_2937:HG4_Ill_GATKHC_19793:HG4_Ill_GATKHCSBGrefine_8555:HG4_Ill_SVrefine2DISCOVARDovetail_8765:HG2_Ill_SVrefine2DISCOVARplusDovetail_2164:HG3_PB_assemblyticsfalcon_4417:HG4_PB_HySA_17971:HG2_PB_HySA_22488;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8645:HG2_Ill_GATKHCSBGrefine_8318:HG2_Ill_GATKHC_19828:HG2_Ill_manta_3457:HG3_Ill_GATKHCSBGrefine_8214;NumExactMatchSVs=5;ClusterMaxShiftDist=0.152047;ClusterMaxSizeDiff=0.152047;ClusterMaxEditDist=0.211765;PBcalls=13;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=80;DistBack=-222169;DistForward=-1;DistMin=-222169;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=11:62860002-62860003;PctSeqSimilarity=0.9529;PctSizeSimilarity=0.9091;PctRecOverlap=0.9101;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=911.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:0:11:0:8:./.:0:5:0:4:1/1:0:17:./.:.:.:.:.:.
chr11	63660829	HG2_Ill_MetaSV_805	C	CCATTTGAAATTTATATGAGTGGCTTTTATTAAATTCACAGTTGTGTATCCATCACCACAATCAATTTTAGAACATTTTCATTACCCCGAAAAGAAACCCCATACTCCTTAGTTTTCACCCTTAAATTTCCCCCAGCTTTCTCAGCAACCACTAACCTACTTTCTGTCTGTATAGATTTGCCTGTTGTGGGCATTTCATATAAATGGAATCATACAATATGTGGTTCTTTATGACCAGCTTTGTTTACTCAACATCGTTTT	20	PASS	ClusterIDs=HG4_PB_pbsv_12378:HG2_PB_pbsv_12398:HG3_PB_pbsv_12082:HG3_PB_assemblyticsfalcon_4420:HG4_PB_HySA_17978:HG4_Ill_manta_2939:HG4_Ill_SVrefine2DISCOVARDovetail_8773:HG4_Ill_GATKHCSBGrefine_8560:HG2_PB_SVrefine2Falcon1plusDovetail_1950:HG2_Ill_SVrefine2DISCOVARplusDovetail_2171:HG2_Ill_MetaSV_805:HG2_Ill_GATKHCSBGrefine_8321:HG2_Ill_manta_3460:HG3_PB_SVrefine2Falcon1Dovetail_7520:HG3_Ill_SVrefine2DISCOVARDovetail_9011:HG3_Ill_MetaSV_890:HG3_Ill_GATKHCSBGrefine_8218:HG4_PB_SVrefine2Falcon1Dovetail_7554:HG2_Ill_breakscan11_4286:HG2_PB_HySA_22494;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8321:HG2_Ill_MetaSV_805:HG2_Ill_SVrefine2DISCOVARplusDovetail_2171:HG2_PB_SVrefine2Falcon1plusDovetail_1950:HG4_Ill_GATKHCSBGrefine_8560:HG4_Ill_SVrefine2DISCOVARDovetail_8773:HG4_Ill_manta_2939;NumExactMatchSVs=7;ClusterMaxShiftDist=0.201183;ClusterMaxSizeDiff=0.193294;ClusterMaxEditDist=0.248521;PBcalls=9;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=260;DistBack=21513;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=11:63660830-63660831;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=913.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:24:0|1:22:4:0:22:0|1:19:0:0:18:0/1:39:15:./.:.:.:.:.:.
chr11	64363726	HG2_PB_HySA_22514	G	GTGGATGGATGGATGGATGGATGGATGGATGGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGAATAGATGGAATGGATAGATGGATGGATGGATGGTTTGATGGTTGAATGGATGGATGGATGGATGGAATGGATGGATGAATGGAATTGATGGATGGATGGGATGGATGGATGGATTGATGGATAGTTGCAATAGATGGAATGGATGGATGGATGGATGGTCGAATGGATAGTTGAATGGATGGATGCATGGATGGATGGATGGATGGAATGGATGGATGGATGGAATGGATGGATGGATGGGAT	10	PASS	ClusterIDs=HG2_PB_pbsv_12403:HG2_PB_HySA_22514:HG2_PB_HySA_22513:HG4_PB_pbsv_12385:HG4_PB_HySA_17994:HG2_PB_HySA_22512;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_22514;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0616883;ClusterMaxSizeDiff=0.0584416;ClusterMaxEditDist=0.281967;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=316;DistBack=4;DistForward=35;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1691;REFWIDENED=11:64362097-64363787;PctSeqSimilarity=0.9938;PctSizeSimilarity=1;PctRecOverlap=0.9842;SizeDiff=0;StartDistance=5;EndDistance=5;GTMatch=1;TruScore=99;MatchId=915.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:37:1/1:6:22:2:14:./.:241:504:225:546:./.:1:4:1/1:3:42:.:.:.
chr11	64526485	HG3_Ill_Spiral_12884	C	CCCCCCGCACAGCCCAGCAGGATGCCAGGACATGTGGAAGCGCCTCCAAGAGCTCCCCAGGAGGGCAAGGCCAAGG	20	PASS	ClusterIDs=HG4_PB_pbsv_12388:HG3_PB_pbsv_12089:HG2_PB_HySA_22517:HG2_PB_pbsv_12405:HG2_PB_SVrefine2Falcon1plusDovetail_1957:HG3_PB_assemblyticsfalcon_4432:HG2_PB_PB10Xdip_6068:HG2_Ill_breakscan11_4290:HG4_PB_SVrefine2PBcRDovetail_6241:HG4_Ill_svaba_15481:HG4_Ill_manta_2943:HG4_Ill_SVrefine2DISCOVARDovetail_8780:HG4_Ill_Krunchall_17126:HG4_Ill_GATKHC_19816:HG4_Ill_GATKHCSBGrefine_8569:HG4_Ill_Cortex_601:HG4_Ill_250bpfermikitraw_16362:HG4_Ill_150bpfermikitraw_15725:HG3_PB_SVrefine2Falcon1Dovetail_7528:HG3_Ill_svaba_15584:HG3_Ill_manta_2824:HG3_Ill_Spiral_12884:HG3_Ill_SVrefine2DISCOVARDovetail_9017:HG3_Ill_Krunchall_16528:HG3_Ill_GATKHC_19701:HG3_Ill_GATKHCSBGrefine_8223:HG3_Ill_Cortex_639:HG3_Ill_250bpfermikitraw_16055:HG3_Ill_150bpfermikitraw_15590:HG2_PB_SVrefine2PBcRplusDovetail_1865:HG2_PB_SVrefine2PB10Xhap12_8928:HG2_PB_SVrefine2Falcon2Bionano_6029:HG2_Ill_svaba_15429:HG2_Ill_manta_3462:HG2_Ill_SpiralSDKrefine_2814:HG2_Ill_SVrefine2DISCOVARplusDovetail_2177:HG2_Ill_Krunchall_16843:HG2_Ill_GATKHC_19851:HG2_Ill_GATKHCSBGrefine_8325:HG2_Ill_Cortex_1454:HG2_Ill_250bpfermikitraw_16519:HG2_Ill_150bpfermikitraw_15581:HG2_10X_SVrefine210Xhap12_8657;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8657:HG2_Ill_150bpfermikitraw_15581:HG2_Ill_250bpfermikitraw_16519:HG2_Ill_Cortex_1454:HG2_Ill_GATKHCSBGrefine_8325:HG2_Ill_GATKHC_19851:HG2_Ill_Krunchall_16843:HG2_Ill_SVrefine2DISCOVARplusDovetail_2177:HG2_Ill_SpiralSDKrefine_2814:HG2_Ill_manta_3462:HG2_Ill_svaba_15429:HG2_PB_SVrefine2Falcon2Bionano_6029:HG2_PB_SVrefine2PB10Xhap12_8928:HG2_PB_SVrefine2PBcRplusDovetail_1865:HG3_Ill_150bpfermikitraw_15590:HG3_Ill_250bpfermikitraw_16055:HG3_Ill_Cortex_639:HG3_Ill_GATKHCSBGrefine_8223:HG3_Ill_GATKHC_19701:HG3_Ill_Krunchall_16528:HG3_Ill_SVrefine2DISCOVARDovetail_9017:HG3_Ill_Spiral_12884:HG3_Ill_manta_2824:HG3_Ill_svaba_15584:HG3_PB_SVrefine2Falcon1Dovetail_7528:HG4_Ill_150bpfermikitraw_15725:HG4_Ill_250bpfermikitraw_16362:HG4_Ill_Cortex_601:HG4_Ill_GATKHCSBGrefine_8569:HG4_Ill_GATKHC_19816:HG4_Ill_Krunchall_17126:HG4_Ill_SVrefine2DISCOVARDovetail_8780:HG4_Ill_manta_2943:HG4_Ill_svaba_15481:HG4_PB_SVrefine2PBcRDovetail_6241;NumExactMatchSVs=35;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.278146;PBcalls=12;Illcalls=30;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=29;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=75;DistBack=52841;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=11:64526486-64526488;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=916.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:55:1/1:1:10:0:13:1/1:0:9:0:17:1/1:0:42:./.:.:.:.:.:.
chr11	65007149	HG2_PB_SVrefine2Falcon2Bionano_6031	TT	GGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGTCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTCGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTG	10	PASS	ClusterIDs=HG4_PB_pbsv_12390:HG2_PB_assemblyticsPBcR_4293:HG2_PB_SVrefine2PBcRplusDovetail_1867:HG2_PB_SVrefine2Falcon2Bionano_6031:HG4_PB_SVrefine2PBcRDovetail_6243:HG2_PB_SVrefine2PB10Xhap12_8930:HG4_PB_assemblyticsfalcon_4336:HG4_PB_SVrefine2Falcon1Dovetail_7562:HG2_PB_SVrefine2Falcon1plusDovetail_1959:HG3_PB_assemblyticsfalcon_4437:HG3_PB_SVrefine2Falcon1Dovetail_7530:HG3_PB_SVrefine2PBcRDovetail_5800:HG2_PB_pbsv_12407;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6031:HG2_PB_SVrefine2PBcRplusDovetail_1867:HG2_PB_assemblyticsPBcR_4293;NumExactMatchSVs=3;ClusterMaxShiftDist=0.119522;ClusterMaxSizeDiff=0.103586;ClusterMaxEditDist=0.229885;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=129;DistBack=-2;DistForward=6599;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=263;REFWIDENED=11:65007008-65007270;PctSeqSimilarity=0.9817;PctSizeSimilarity=0.9847;PctRecOverlap=0.7481;SizeDiff=-2;StartDistance=32;EndDistance=33;GTMatch=0;TruScore=90;MatchId=917.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:49:1/1:4:21:2:15:./.:0:3:0:5:1/1:0:22:./.:.:.:.:.:.
chr11	65503484	HG2_Ill_MetaSV_807	A	ACCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGAAACAACAC	20	PASS	ClusterIDs=HG2_PB_HySA_22526:HG2_PB_pbsv_12411:HG2_PB_PB10Xdip_6076:HG4_PB_pbsv_12398:HG2_PB_PB10Xdip_6075:HG3_Ill_GATKHCSBGrefine_8228:HG2_Ill_GATKHCSBGrefine_8332:HG4_Ill_MetaSV_838:HG3_Ill_MetaSV_892:HG2_Ill_MetaSV_807:HG3_PB_pbsv_12095:HG2_PB_assemblyticsPBcR_4298:HG4_PB_HySA_18005:HG2_PB_SVrefine2Falcon1plusDovetail_1961:HG2_PB_SVrefine2PBcRplusDovetail_1869:HG2_PB_SVrefine2PB10Xhap12_8932:HG2_PB_SVrefine2Falcon2Bionano_6033:HG2_10X_SVrefine210Xhap12_8661:HG4_PB_SVrefine2PBcRDovetail_6245;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_MetaSV_807:HG3_Ill_MetaSV_892:HG4_Ill_MetaSV_838;NumExactMatchSVs=3;ClusterMaxShiftDist=0.14673;ClusterMaxSizeDiff=0.144201;ClusterMaxEditDist=0.25641;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=315;DistBack=-1;DistForward=1133;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=11:65503485-65503484;PctSeqSimilarity=0.9969;PctSizeSimilarity=1;PctRecOverlap=0.9714;SizeDiff=0;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=98;MatchId=918.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:4:19:0:25:./.:1:7:0:8:1/1:1:31:1/1:4:72:.:.:.
chr11	65984325	HG4_PB_SVrefine2Falcon1Dovetail_7567	A	AGTGGAGACTTCTTAAAATCAACACAGGGTCATCCCTTCAACGATTCCAATGAACGCTCTATATCCTCACCACCGCCCAATTAGACTCACTGTTGTTTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4292:HG2_PB_pbsv_12415:HG3_PB_pbsv_12100:HG3_PB_assemblyticsfalcon_4448:HG3_PB_SVrefine2PBcRDovetail_5804:HG3_PB_SVrefine2Falcon1Dovetail_7535:HG3_PB_HySA_18671:HG4_PB_SVrefine2Falcon1Dovetail_7567:HG2_PB_HySA_22538;NumClusterSVs=9;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_7567;NumExactMatchSVs=1;ClusterMaxShiftDist=0.158055;ClusterMaxSizeDiff=0.158055;ClusterMaxEditDist=0.266667;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=310;DistBack=52238;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=96;REFWIDENED=11:65984326-65984421;PctSeqSimilarity=0.9025;PctSizeSimilarity=0.9568;PctRecOverlap=0.9569;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=93;MatchId=919.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:21:./.:19:6:6:15:./.:0:3:11:0:0/1:10:5:./.:2:25:.:.:.
chr11	66229610	HG2_PB_SVrefine2PBcRplusDovetail_1873	A	AGGGAGGGGAAGGGAAGGTGGGGGAAGGGGAGGCGGAGGGGAAGGAGAAGGGGGAAGGGGAGGGGAGGAGAGGGGGAGGGGGAGGGGAAGGGAAGGGAAGGGGGAGGGGGAGGAGAAGTGGGAGAGGAAGGGGAAGGGAAGGGGGAGGGGGAGGAGGAGTGGGAGGGGAAGGGGAGGGGAAGGGGAAGAGGAAGGGGAAGGGAAAGGGAAAGGGGAAGGGGAGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6248:HG3_PB_pbsv_12102:HG4_PB_assemblyticsfalcon_4349:HG2_Ill_breakscan11_4293:HG4_PB_pbsv_12403:HG2_Ill_SVrefine2DISCOVARplusDovetail_2184:HG3_PB_SVrefine2PBcRDovetail_5806:HG2_PB_SVrefine2PBcRplusDovetail_1873:HG2_PB_SVrefine2PB10Xhap12_8937:HG4_PB_SVrefine2Falcon1Dovetail_7570:HG2_PB_PB10Xdip_6092:HG2_PB_PB10Xdip_6091:HG3_PB_HySA_18673:HG2_PB_HySA_22541:HG2_PB_pbsv_12418:HG2_PB_SVrefine2Falcon2Bionano_6038:HG3_PB_SVrefine2Falcon1Dovetail_7538:HG3_PB_assemblyticsfalcon_4451:HG2_PB_SVrefine2Falcon1plusDovetail_1964;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8937:HG2_PB_SVrefine2PBcRplusDovetail_1873:HG3_PB_SVrefine2PBcRDovetail_5806;NumExactMatchSVs=3;ClusterMaxShiftDist=0.197647;ClusterMaxSizeDiff=0.197647;ClusterMaxEditDist=0.305825;PBcalls=17;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=223;DistBack=-17;DistForward=-1;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=11:66229611-66229627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=920.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:35:./.:0:1:0:1:1/1:0:10:0:8:1/1:0:17:./.:.:.:.:.:.
chr11	66365934	HG2_Ill_GATKHCSBGrefine_8342	G	GAGATTGTGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAAAAAAATAAAAAAATAAATTTAAAAAAATAGAGAAAGAAAATAGATTGGTGGCAGGGGTGGAAGAATAGGAGGGTGATAGCTAAGGGATATAGGATTTCCTTTCCTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTAGAGACGGAGTCTCACTTTTTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAGTTCTTGTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGTGCACCCCCTTGTCTGGCAAATTTTTATATTTTTGGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAACCTCCTGACCTCAGGTGATCCACCCATGTCGCCCTCCCAAACTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCTATTTTGTTCTTTTTGTTTGTTTTATTCCGTATCGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCATTGACATGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGTGGGTGGATTACCTGAGGCCAGGGGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAATCTAGCAGGTGGAGGTTGCAGTGAGCCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7539:HG3_PB_pbsv_12103:HG2_Ill_MetaSV_811:HG4_PB_pbsv_12404:HG3_Ill_MetaSV_895:HG3_Ill_GATKHCSBGrefine_8239:HG2_Ill_GATKHCSBGrefine_8342:HG4_Ill_GATKHCSBGrefine_8584:HG4_Ill_MetaSV_843:HG3_PB_HySA_18674:HG2_PB_pbsv_12419:HG2_PB_PB10Xdip_6093:HG2_PB_SVrefine2PB10Xhap12_8938:HG3_PB_SVrefine2PBcRDovetail_5807:HG3_Ill_SVrefine2DISCOVARDovetail_9027:HG2_10X_SVrefine210Xhap12_8666:HG4_PB_SVrefine2Falcon1Dovetail_7571:HG2_PB_SVrefine2Falcon1plusDovetail_1965;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8342:HG3_Ill_GATKHCSBGrefine_8239:HG3_Ill_MetaSV_895;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0755926;ClusterMaxSizeDiff=0.0755926;ClusterMaxEditDist=0.222637;PBcalls=10;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=779;DistBack=87;DistForward=13090;DistMin=87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=295;REFWIDENED=11:66365703-66365997;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=921.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:24:0|1:12:2:2:15:1|0:0:9:9:0:0/1:32:13:0/1:18:69:.:.:.
chr11	66990063	HG2_PB_SVrefine2Falcon2Bionano_6040	A	ACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGAGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGACCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCAGCTGGCCGGGCGGGGGGCTGACACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCAGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGACTGGCCGGGCGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACACCCCCACCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1967:HG2_PB_HySA_22543:HG4_PB_HySA_18018:HG3_PB_pbsv_12105:HG2_PB_PB10Xdip_6095:HG2_PB_PB10Xdip_6094:HG2_PB_pbsv_12421:HG4_PB_SVrefine2Falcon1Dovetail_7573:HG3_PB_SVrefine2PBcRDovetail_5809:HG4_PB_pbsv_12407:HG4_PB_SVrefine2PBcRDovetail_6250:HG2_PB_SVrefine2PBcRplusDovetail_1876:HG2_PB_SVrefine2PB10Xhap12_8940:HG2_PB_SVrefine2Falcon2Bionano_6040:HG3_PB_SVrefine2Falcon1Dovetail_7541;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6040:HG2_PB_SVrefine2PB10Xhap12_8940:HG2_PB_SVrefine2PBcRplusDovetail_1876;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0520446;ClusterMaxSizeDiff=0.0483271;ClusterMaxEditDist=0.264706;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=532;DistBack=30162;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=77;REFWIDENED=11:66990064-66990140;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9925;PctRecOverlap=0.9646;SizeDiff=-4;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=98;MatchId=922.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:10:0:6:./.:0:1:0:2:1/1:0:18:./.:4:70:.:2568:.
chr11	67001003	HG2_PB_PB10Xdip_6098	A	TCCCAGCTACTGGGGAGGCTGAGGCAGAATCTCTTCAACTCGGGAGGTAGAGGTTGCAGTGAGCCAAGATCACGTCATTGCACTCCAGCCTGGGCAACAAGTGCGAAACTCAGTCTCAAAAAAAAAAAAAAAATACTTATAGGGAATAATTTTGTGACCTCAGTGAAAATGGACTAAATGTCTCATAGTAAGTCTTTTCCATCGTTGATGCCTCATTCAGGTTTTCTGTGGCCACCACATAACCAGATGAGGTGCTCCTCAGCTTCTCCTGGCCACCTTAGGAGAGAATTCCAAAGACTAGGATAGGACTTCATCTTTTATTCTTTTTAAAATCGACATTTTAATTAGATCTTATATTGTTTATGCGTCAGTGAAAAGGTAAAAAATAACAGAGGCTTAAAAGGGGCAAAAACCTGGTGAAGTTGGTCCTTTTTAGTAGTGATAGAAACTAGATAGTTGGTGTTATAGTTTGGTTTTATAATGTTTGCTATAAGAAGAGGCAGTTGATATCATCGTAGGTTTTATTTATGTTTATGGGAGGAAATGACAAAGTTCCAGGTAGGTGTGGTCCTACTTCTATAATGATTCATGTGTGCAACAAAACAAATTTAGCTATACTTTCCCAGACTTTCACTTCATACCCTTAAATGAACAAAGGACATTCAGATTTTTCATTTCCATTGTGGTAAGACTTATATTCCATTGTGGATGTATGTGGGAAACTTTAAATTGTGACTTTCTTTTTTTTTTGGAGACAGAGTTTTGCTCTTGTTGCCCAGACTGGAGTGCAGTGTCGCGATCTCGGCTCACTGCAGCATCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGAGCATGCCACCACGCTCAGCTAATTTTTATTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTAATCTCGAACTCCTGAGCTCAGGTGATCCACTCGGCTCAGCCTCCCAAAATGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCCTAAATTGTGACCTTTGAGACTTTTAACTTGTATAATTGTCTTAGGGACCCTAAGAAAAAAGAATTCTAAGGTTACACCTCATAACATTCTTTTGGCCTGGGTATCTGTATTTCTAATTCATGATTTTTAAAAATGTCTTTTCAGCCCTAGGGGATGTCATAACATTCCATTGGCCTGGGTATCTGTGTTTCTGATTCATGATTTTTAAAAAAGTCTTTTCAGCCCTAGGGAATGTCTATAGATAGATTTGACTCCATTGAATTCAGTTGTAAAAAGCCATATAATAATCCACTAATCAATTATACAAGGTCAAGTGTGGTAGTAATAACACAAACTCCCTTAAACTATTGGAGGCTGAGCATGGTAGCTCACGCCTGTAACCTCAGCACTTTGGGGGGCTGAGGTAGGCAGATCACTTGAGCCCAGGAATTTGAGACCATCCTGGCCAACATGTTGAAACGCCATCTCTACAAAAAAAAAAAAACAAAACAAAACAAAAAAAAAAAAAAAAAATATATATATATATATATATAAATTAGCTGGGCATAGTGACGCTCTCCTGTAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1968:HG2_PB_pbsv_12422:HG2_PB_HySA_22545:HG2_PB_PB10Xdip_6099:HG2_PB_PB10Xdip_6098:HG4_PB_HySA_18019:HG3_PB_SVrefine2Falcon1Dovetail_7542:HG2_Ill_SVrefine2DISCOVARplusDovetail_2190:HG4_Ill_SVrefine2DISCOVARDovetail_8789:HG3_Ill_SVrefine2DISCOVARDovetail_9031:HG2_PB_SVrefine2PB10Xhap12_8941:HG2_10X_SVrefine210Xhap12_8669:HG2_PB_SVrefine2PBcRplusDovetail_1877:HG2_PB_SVrefine2Falcon2Bionano_6041:HG3_PB_SVrefine2PBcRDovetail_5810:HG4_PB_SVrefine2Falcon1Dovetail_7574:HG4_PB_SVrefine2PBcRDovetail_6251;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_6098:HG2_PB_PB10Xdip_6099;NumExactMatchSVs=2;ClusterMaxShiftDist=0.125481;ClusterMaxSizeDiff=0.124889;ClusterMaxEditDist=0.179935;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=1593;DistBack=34;DistForward=30;DistMin=30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:67001004-67001002;PctSeqSimilarity=0.9576;PctSizeSimilarity=0.9187;PctRecOverlap=0.9182;SizeDiff=-141;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=93;MatchId=923.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:1:20:1:13:./.:2:0:2:1:0/1:13:14:./.:20:221:.:2568:.
chr11	67097202	HG2_PB_SVrefine2Falcon2Bionano_6042	C	CCTCCCCTCCCCTCCCCTCCCTCCCCTCCTCTCCCCTCCCCTCCTCTCCCCTCCCCTCCTCTCCCCTCCCCTCCCCTCCCCTCCTCTCCCCTCCCCTCCTCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCTCTCCCGTCCCCTCCCCTCCT	10	PASS	ClusterIDs=HG3_PB_pbsv_12107:HG3_PB_assemblyticsfalcon_4456:HG4_PB_assemblyticsfalcon_4355:HG4_PB_SVrefine2Falcon1Dovetail_7575:HG4_PB_HySA_18021:HG3_PB_HySA_18677:HG2_PB_SVrefine2Falcon1plusDovetail_1969:HG4_PB_SVrefine2PBcRDovetail_6252:HG3_PB_SVrefine2Falcon1Dovetail_7543:HG3_PB_SVrefine2PBcRDovetail_5811:HG2_PB_SVrefine2PBcRplusDovetail_1878:HG2_PB_SVrefine2Falcon2Bionano_6042:HG2_PB_pbsv_12423:HG4_PB_pbsv_12409;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6042:HG2_PB_SVrefine2PBcRplusDovetail_1878:HG3_PB_SVrefine2PBcRDovetail_5811;NumExactMatchSVs=3;ClusterMaxShiftDist=0.120253;ClusterMaxSizeDiff=0.113924;ClusterMaxEditDist=0.22508;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=154;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=22;REFWIDENED=11:67097203-67097224;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=924.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:38:1/1:2:10:2:10:./.:0:2:0:4:./.:2:5:./.:.:.:.:.:.
chr11	67422494	HG2_PB_SVrefine2PBcRplusDovetail_1880	T	TTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCCCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAGGTTCTTAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7545:HG2_Ill_GATKHCSBGrefine_8344:HG3_PB_pbsv_12109:HG2_PB_HySA_22550:HG4_PB_pbsv_12411:HG2_Ill_MetaSV_813:HG4_PB_SVrefine2PBcRDovetail_6254:HG2_PB_SVrefine2PBcRplusDovetail_1880:HG2_PB_SVrefine2PB10Xhap12_8943:HG2_PB_SVrefine2Falcon2Bionano_6044:HG4_Ill_MetaSV_845:HG4_PB_SVrefine2Falcon1Dovetail_7577:HG2_PB_SVrefine2Falcon1plusDovetail_1971:HG2_PB_PB10Xdip_6103:HG2_PB_PB10Xdip_6102:HG2_PB_pbsv_12425:HG4_PB_HySA_18024:HG3_PB_HySA_18682:HG3_PB_SVrefine2PBcRDovetail_5813;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6044:HG2_PB_SVrefine2PB10Xhap12_8943:HG2_PB_SVrefine2PBcRplusDovetail_1880:HG4_PB_SVrefine2PBcRDovetail_6254;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0567823;ClusterMaxSizeDiff=0.0567823;ClusterMaxEditDist=0.255385;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=54114;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=338;REFWIDENED=11:67422481-67422818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=925.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:1/1:1:46:1:10:1/1:0:7:0:7:1/1:0:11:1/1:2:49:.:.:.
chr11	67974432	HG2_PB_SVrefine2PB10Xhap12_8946	G	GGGCACAGTGGCTCACGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCCACTAAAAATACAAAAAATTAGCCGGGCATGGTGGCGGCTGAGGCAGGAGAATGGTGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCAAGATTGCGCCACTGCACTCCAGCCTCGGCGACAGAGCGAGACTCCGTTTCAAAAAAAAAAAAAAAATCATGCCAAGCTACATCTCCCATCCTAAACATTCAGAGGGACCACAGACTGGACTACAGAGCTTCTTACAACACAGTTTAGTTTGTGGTGTACCTGGTCAAACAGATTATTTTCACACCCTATAAAAGAAGATACAAACATCACTGCCCTTTAACACACACTCAATACTATCATCCCCATTTTACAAATGAGAACAAAACTCAGAGAATTAGAAAAAAAACTGAAGTGAAGTCCAGGCTGAGAGACTGTGTACTGTTAATATCACACAAAAAAGCAACACAGGCCAGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAGGTCAAGAATTCGAGACCAGCCTGGCGAACATAGTGAAAATCCATTTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCACCTGCCCGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGTGGTGAACCAAGATCGTGCCACTGCACTCCAGCTTGGGCAACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAACAAACCAAAAAACAACACAGAATAATGACCCAAACAAATTTTTTATTTTTTTAGACGCTGTCTCGCTCTATTGCCCAGGCTGGAGTGCAGTGGCACGATCTCTGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGGAATTCTCTGTCTCAGCCTCCCGAGTAGCAGGAATTACAGGTGCCCACCACCACGCCCAGCTAATTTTTGTATTTTCAGTAGAGACAGCGTTTCACCATGTTGGCCAGGATGGTCTTGAACTCCTGACCACGTGATTCACCTGTCTCGGCCTCCCAAAGTGCTGAGGTTACAGGCGTGAGCCATCACGCCTGGCCCCAAACAAATTTTTAAACACACTTCGCCCAAGCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6046:HG2_PB_SVrefine2Falcon1plusDovetail_1975:HG2_PB_SVrefine2PBcRplusDovetail_1883:HG2_PB_SVrefine2PB10Xhap12_8946;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8946:HG2_PB_SVrefine2PBcRplusDovetail_1883;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00331813;ClusterMaxSizeDiff=0.00248859;ClusterMaxEditDist=0.00663625;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1206;DistBack=8507;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1350;REFWIDENED=11:67974433-67975782;PctSeqSimilarity=0.9958;PctSizeSimilarity=1;PctRecOverlap=0.9229;SizeDiff=0;StartDistance=-93;EndDistance=-93;GTMatch=0;TruScore=97;MatchId=926.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:24:1|0:3:23:16:0:./.:0:0:0:9:./.:0:5:0/1:34:22:.:.:.
chr11	68031789	HG2_PB_SVrefine2Falcon2Bionano_6047	A	ACCATTCATCCATCAATCCACCCATTCATCCATCCACCTGCCCGCCCACCCATCCATCCACCCACTATTCTATCCATCTACTCATCTGTCCATCCATCCATCCACTCACCCATCCATCCATCCACTTACCCACTTACCCATCTATCCATCCATCCATCCATCCACCCACCCATCCATCCACCCACTCATCCATCCACCCACTCATCCATCCATCCATCCATCCATCCACCCACCCACCCATCCATCCATCCACCCACCCATCCATCTACCTACTCATCCATCCATCCACCCACTATTCTATCCATCTACTCACCTGTCCATCCATAAGTCCATCCATCCATCCATCCATCCATCCACCCATCCATCCACCCACTCATCCATCCATCCACCCACCATATCCTATCCATCTGTTCATCTATCCATCCATCCACCCACCCACCCCATCCATCCACCCACTCATCCATCCATCCATCCATCCATCCTTCTATCCATCTACTCATCTGTCCATCCATCCATCCATCCACCCACCCATCCACCCACCCACTCTTCCATCCATCCATCCACCCACTATTCTATACATCTACTCATCTGTCCATCCATAGGTTCACTCATCCATCCATCCATCCATCTACCCACCCACCCATCCATCTATCCACTATTCTATTCATCTATTCATCTGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATTCATCCATCCATCCACTCATCCACTTTTCCATCCATCTACTCATCTGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6255:HG2_PB_PB10Xdip_6111:HG2_PB_pbsv_12431:HG3_PB_pbsv_12115:HG4_PB_pbsv_12417:HG2_Ill_breakscan11_4295:HG2_PB_HySA_22559:HG3_PB_SVrefine2PBcRDovetail_5817:HG4_PB_SVrefine2Falcon1Dovetail_7579:HG3_PB_SVrefine2Falcon1Dovetail_7547:HG2_PB_SVrefine2PBcRplusDovetail_1884:HG2_PB_SVrefine2PB10Xhap12_8947:HG2_PB_SVrefine2Falcon2Bionano_6047:HG2_PB_SVrefine2Falcon1plusDovetail_1976;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1976:HG2_PB_SVrefine2Falcon2Bionano_6047:HG2_PB_SVrefine2PB10Xhap12_8947:HG2_PB_SVrefine2PBcRplusDovetail_1884:HG3_PB_SVrefine2PBcRDovetail_5817;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0912185;ClusterMaxSizeDiff=0.0912185;ClusterMaxEditDist=0.261219;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=767;DistBack=44875;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=417;REFWIDENED=11:68031790-68032206;PctSeqSimilarity=0.9391;PctSizeSimilarity=0.9192;PctRecOverlap=0.4863;SizeDiff=62;StartDistance=-363;EndDistance=-363;GTMatch=0;TruScore=78;MatchId=927.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:11:0:10:./.:0:0:0:0:1/1:0:11:./.:4:45:.:838:.
chr11	68196392	HG2_PB_SVrefine2PB10Xhap12_8950	G	GAAAAAAAAAAAAAAAAAAAAAAAGCCAGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTATGGCCGGGCGCAGTGGCTCCCGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGAATTACAAGGTCAAGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCATCAAGATCACAAGGTCAAGAGATGGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCATGGTAGCGGGCGCCTGTAGTCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCGGTGAGCCGAGATCGCTCCATGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6050:HG2_10X_SVrefine210Xhap12_8674:HG3_PB_assemblyticsfalcon_4473:HG4_PB_pbsv_12423:HG2_PB_pbsv_12435:HG2_PB_PB10Xdip_6116:HG2_PB_PB10Xdip_6115:HG3_PB_SVrefine2Falcon1Dovetail_7551:HG4_PB_HySA_18042:HG2_PB_HySA_22563:HG3_PB_HySA_18700:HG2_PB_assemblyticsfalcon_4471:HG3_PB_SVrefine2PBcRDovetail_5821:HG3_PB_pbsv_12122:HG3_Ill_SVrefine2DISCOVARDovetail_9040:HG4_Ill_SVrefine2DISCOVARDovetail_8798:HG2_PB_SVrefine2PBcRplusDovetail_1887:HG2_PB_SVrefine2PB10Xhap12_8950:HG2_Ill_SVrefine2DISCOVARplusDovetail_2196:HG2_PB_SVrefine2Falcon1plusDovetail_1980:HG4_PB_SVrefine2Falcon1Dovetail_7582:HG4_PB_SVrefine2PBcRDovetail_6258;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2196:HG2_PB_SVrefine2PB10Xhap12_8950:HG2_PB_SVrefine2PBcRplusDovetail_1887;NumExactMatchSVs=3;ClusterMaxShiftDist=0.196555;ClusterMaxSizeDiff=0.196555;ClusterMaxEditDist=0.269504;PBcalls=18;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=509;DistBack=11474;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=11:68196393-68196415;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.998;PctRecOverlap=0.9609;SizeDiff=-1;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=98;MatchId=928.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:54:1/1:0:13:0:16:./.:0:6:0:2:./.:0:3:1/1:3:65:.:.:.
chr11	68656278	HG2_10X_SVrefine210Xhap12_8678	G	GTGGCTCATGCCTGTAATTCCAGCACTTTGAGAGGCCAAGGTGGGAGGATTGCTTAAGGCCAGGAGTTTGAGACCAGCCTGGGCAACATAATGAGATCTCATCTCTATTAAAAAAAAAAAAAATGCTGGGTGCAGTGGCTCATACCTATAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAAATGCTTGAACCTGGGAGACGGAGGTTGCAGTGAGCCAAGATCACGCCATTGTACTTTTGTACTTCAGCCCAGGCAACAAGAGCGAAATTCTGTCTCCAAAAAAAAAAAAAAAAAAAAAAGCTGGGTGCAGTGGCTCATGCCTGTAATCTCAGCACTTTGTGAGGCTGAGGTGGGCCGATCAGTTGAGCCCAGGAGTTTGAGACCAGCCGGGGCAACATGGCAAAACCCTGTCTCTACCAAAAAACCATAAAAAATTAGCCAGGTGTGATGGTGCGTGTCTATAGTCCCAGCTACTTGGGAGGCTGAGGTGAGAGGATCCCTTGACCCCAGGAGGTGAAGGTTGCAGTGAGTCGGGATGGGCCCACACACAGTATGTATATGTGTGTAAATAGATACATAGTTTCTAGTTTAATTTCTATTTTCCAACTGGACCAATGAGCTCAGGGTGGAGTCCATTACCAAACAGAACCAACAAAGCTTTTGCAGTTTCCAGGGCCGGATACTTATTTATGCAAAAAACAGGTGTAGCTGGAGGGCAGAGCATCTAGACCCCCAGAAATGAAGGATTCCATTTTTACACTGAAACTTGGGTCCCCGATAAGAAGGAAATGCTCTAGGACCGGCCTCCACAGAGCTTCCACAAGCAGCACACTGAAAAGGCATCCCCCAAGGCTGATGTGTGGTCCAGTGCCAATCAGCCCCTTCTGTGATCAGCCCATCCACCATGGGAGCCTTCTTCCTCTGTGGTGTTTCCATTGCGTCCAAGTGTTCTAACCTTTCTTTCTTCTCTTTCCTCCTTCCTTCCTTCCTTTCCTTTCCCTTTCTTTTTCTTTCCTTCCTTCCTTTTCTTCCTTTCTTTGTATTTCTCTCTCTCTCTCTCCTCTCTCTCCCCCTCCATCCCTCCCTCCCTTCCTTCCTTCTTTCTTTTCCTCCCTCCCTCCCTTTCCTCCTCATCCTCCCTTCCTCTTTCTCCTTCCTTCCTTCCGTCCTTCCTTCCTTCCTTCCTTCTCTCTCTCTTTCTTTTCGAGACAAGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCATGCGATTCTCCTGCCTCATCCTCTCAAGTAGCTGGGACCACAGGTGCATGCTACCACGCCTGGCTGATTTTTGTATTTTTAGTACAGACAGCGTTTCGCCATGCTGGCCAGGCTAGTCTCAAACTCCTAACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGACATGAGCCACCGCACCTGGCCTCAAATCGTGCCTTTCTTATAGAAAGTCACAAAGAAACAAGAAGCCCCTGCAGTAATAACTATTCACTGCAACCACCGTCAGCCACCTCCAAAATTGTAGCCCTTGCCAGTGACTTGCCAGTTGCCGCACACACAGAGGTCAAGCGCTCTCTCACAGTACAAAATAATCCTGGGTATCTCAAAAGCCAAAGAGATCTGGTAACTCAATGCAGAAGACAGCAGCCCTTTAGACCTGAGGGTCTTGGGAGCTCATGACTCTTGGGGCTCCACAAGGAAAACAGAAAACCCCAAATAGGGGATGTGCAAGGCACCTTTTTCTATGTTCTTCAAGGGGTCTCAGGGCTGCTAGAAGTCTCCCCTAGGTTTCTTCATGTGGTATCAAAGATGGCAAAAGGAAGGAGTCTTAGAAGAGCAAATTTGGGGAAATTTTAAGTTTTCTAAAAGGTAAATGAAATTCTGCATTTTTCTCAGCAAAAATCATGTCAACATGTGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGACTGAGGAGGCGGATCACATGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAATCCTGTCTCTACTAAAAATACAAAAAAAATTAACCTGGTATGGTGCTGTGCACCTACAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCTAAGATCGCGCTATTGCACTCCAGCCTGGATGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGGAAGCAAATGGTTGTAGTTCAGGGCTTCCCCTTTAGCAATTTTTTTTTATTTTTTTTATTTTTATTTTTTTTAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCACGATCTCGGTTCACCAAAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCTTCAGCCTCCTGAGTATCTGGGATTACAGGCATGCGCCACCACACCTGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCCCCATGTTGGTCAGGCTGGTCTCGAACCCCCGACCTCAGGTGATCCGTCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACAGCACCAGGCCTGTTCTGTCCCCATTAAACACTCACCTCCTACTCCTCCCTCCTCCAGCTCCTGGCACCCACCATCCTACTACTTTCTGCTGCTGGAATTCGACTACTCTAGGGACCTCATGTAAGCAGAAACATACAAATGCTTGTCTTTTTGTGTCTGGCTTCTCTCACTGAGCACAGTGTCTTCAAGGTTCATCCGTGTTGTGACATGCATAAGAATTTCCTTCCTTTCTATGGCTGAATGATATTCCATTGTGTGGATGGACCACATTTTGTTGATCCTTCCATCCATGGATGGACACTTGGGTTGCTTCCACCTTTTGGCCATTGTGAACAGTGCTGCTACGAACATGGTTGTACAAATGTCTCTTCAAGACCTTGCTGTTGGCCGGGTGTCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7555:HG3_PB_pbsv_12127:HG4_PB_HySA_18049:HG2_PB_assemblyticsfalcon_4476:HG3_PB_assemblyticsfalcon_4479:HG4_PB_SVrefine2Falcon1Dovetail_7585:HG4_PB_SVrefine2PBcRDovetail_6260:HG3_Ill_SVrefine2DISCOVARDovetail_9041:HG4_Ill_SVrefine2DISCOVARDovetail_8799:HG2_PB_SVrefine2Falcon2Bionano_6054:HG2_10X_SVrefine210Xhap12_8678:HG2_PB_SVrefine2Falcon1plusDovetail_1982:HG3_PB_SVrefine2PBcRDovetail_5824:HG2_Ill_SVrefine2DISCOVARplusDovetail_2199:HG2_PB_SVrefine2PB10Xhap12_8955:HG2_PB_SVrefine2PBcRplusDovetail_1890;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8678:HG2_PB_SVrefine2Falcon2Bionano_6054;NumExactMatchSVs=2;ClusterMaxShiftDist=0.18969;ClusterMaxSizeDiff=0.18969;ClusterMaxEditDist=0.226561;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=3017;DistBack=22351;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=239;REFWIDENED=11:68656279-68656517;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9931;PctRecOverlap=0.9737;SizeDiff=-21;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=98;MatchId=929.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:88:1/1:0:40:1:27:./.:0:2:0:8:1/1:0:24:1/1:4:423:.:3219:.
chr11	68723568	HG2_PB_PB10Xdip_6139	T	AGGGGTAGGGTTGAGGGGGCTGGAGTGGGGCAGGGTGGGGGCAGGGTGAGGGGGCTGGGGAGGGGGTAGGGTGAGGGGGCTGGGCGGGATGGGGCAGGGTGGGGGGCTGGGGAGGGGGTAGGGTGGGAGTGCTGGGGCAGGGTGGGGGCAGGATGGGGGGGCTGGGGCAGGGTGGGGGCAGGGTGGGGAGGCTGGGGAGGAGGTAGGGTGGGGTGCTGGGGGCAGGGTGGGGGGTTGGGGTGGGGTGGGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1984:HG2_PB_HySA_22570:HG2_PB_pbsv_12440:HG3_PB_pbsv_12129:HG2_PB_PB10Xdip_6140:HG2_PB_PB10Xdip_6139:HG4_PB_pbsv_12427:HG4_PB_SVrefine2PBcRDovetail_6261:HG3_PB_SVrefine2Falcon1Dovetail_7556:HG3_PB_SVrefine2PBcRDovetail_5826:HG2_PB_SVrefine2PBcRplusDovetail_1891:HG2_PB_SVrefine2PB10Xhap12_8956:HG4_PB_SVrefine2Falcon1Dovetail_7587:HG2_PB_SVrefine2Falcon2Bionano_6055;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_6139:HG2_PB_PB10Xdip_6140;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0629921;ClusterMaxSizeDiff=0.0629921;ClusterMaxEditDist=0.344294;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=250;DistBack=-97;DistForward=7851;DistMin=-97;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=221;REFWIDENED=11:68723445-68723665;PctSeqSimilarity=0.996;PctSizeSimilarity=0.996;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=930.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:31:1/1:3:18:1:11:./.:0:2:1:4:./.:0:0:./.:.:.:.:.:.
chr11	68859848	HG3_Ill_svaba_15625	C	CGGCTAAGGGGAGAGAGCCCGGAAGCCACGCACACCGGCGCAAGGGGCGGATA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_15608:HG4_PB_HySA_18064:HG2_PB_assemblyticsfalcon_4489:HG4_PB_pbsv_12435:HG2_PB_PB10Xdip_6155:HG2_PB_pbsv_12448:HG2_PB_HySA_22581:HG3_PB_HySA_18710:HG4_Ill_svaba_15532:HG4_Ill_manta_2948:HG4_Ill_Krunchall_17160:HG4_Ill_GATKHC_19862:HG4_Ill_GATKHCSBGrefine_8598:HG4_Ill_Cortex_607:HG4_Ill_250bpfermikitraw_16389:HG3_PB_assemblyticsfalcon_4487:HG3_Ill_svaba_15625:HG3_Ill_manta_2829:HG3_Ill_Spiral_12906:HG3_Ill_Krunchall_16553:HG3_Ill_GATKHC_19745:HG3_Ill_GATKHCSBGrefine_8252:HG3_Ill_Cortex_644:HG3_Ill_250bpfermikitraw_16081:HG2_Ill_svaba_15474:HG2_Ill_manta_3467:HG2_Ill_SpiralSDKrefine_2833:HG2_Ill_Krunchall_16872:HG2_Ill_GATKHC_19894:HG2_Ill_GATKHCSBGrefine_8356:HG2_Ill_Cortex_1460:HG2_Ill_250bpfermikitraw_16545;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15608:HG4_Ill_svaba_15532:HG4_Ill_manta_2948:HG4_Ill_Krunchall_17160:HG4_Ill_GATKHC_19862:HG4_Ill_GATKHCSBGrefine_8598:HG4_Ill_Cortex_607:HG4_Ill_250bpfermikitraw_16389:HG3_PB_assemblyticsfalcon_4487:HG3_Ill_svaba_15625:HG3_Ill_manta_2829:HG3_Ill_Spiral_12906:HG3_Ill_Krunchall_16553:HG3_Ill_GATKHC_19745:HG3_Ill_GATKHCSBGrefine_8252:HG3_Ill_Cortex_644:HG3_Ill_250bpfermikitraw_16081:HG2_Ill_svaba_15474:HG2_Ill_manta_3467:HG2_Ill_SpiralSDKrefine_2833:HG2_Ill_Krunchall_16872:HG2_Ill_GATKHC_19894:HG2_Ill_GATKHCSBGrefine_8356:HG2_Ill_Cortex_1460:HG2_Ill_250bpfermikitraw_16545;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0934579;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.238532;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=2151;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=136;REFWIDENED=11:68859849-68859984;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=931.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:2:41:0:9:./.:0:24:3:13:1/1:0:54:./.:.:.:.:.:.
chr11	68892136	HG4_PB_pbsv_12437	A	AAAGAGGAGGAGGGAGGGGAGGAGGAAGAGGAGGGGAGGTGGAGGAGGAAAAAGAGGGGGAGGGGAGCGGAGGAGAAGGTGGAGGAGGGGAAAGAGGGGGAGAAGGGGGGAGGGAGGCGAGAAGGTGGGGAGGGGGAAGAGGGGGAGGGAGAATGGGGAGGAGAAGGAAGAGGGAAGAGGGGAGGGGGAGAAGGGTGAGGAGAAGGGAAGAGGGGAGAGGGGGAGGGAGAAGGAGGAGGGGGAAGAGGGGGGAGAGGGGGAGGGGAGAAGGCGGAGGAGAGGGAGAGGGAGAGGGGAGGAGGGGGAGGAGGGGGGAGAGGAGGGAGGGGAGGTGCGGGAAGGGGAGGTGAGGGGCAGGAGGGGGAAGAGGGGAGGGGGAGGAGGGGGAGGAGGGGGGAAGAGGGGTAGGAGTGTGGGCGAAAGAGAGAAGAGGGGAGGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1990:HG2_PB_HySA_22586:HG4_PB_pbsv_12437:HG2_PB_HySA_22585:HG4_PB_HySA_18065:HG3_PB_HySA_18713:HG2_PB_PB10Xdip_6159:HG3_PB_pbsv_12139:HG3_PB_SVrefine2Falcon1Dovetail_7562:HG3_PB_SVrefine2PBcRDovetail_5831:HG4_PB_SVrefine2Falcon1Dovetail_7594:HG2_PB_SVrefine2PB10Xhap12_8962:HG2_PB_pbsv_12450:HG4_PB_SVrefine2PBcRDovetail_6265:HG2_PB_SVrefine2PBcRplusDovetail_1896:HG2_PB_SVrefine2Falcon2Bionano_6060;NumClusterSVs=16;ExactMatchIDs=HG4_PB_pbsv_12437;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0840909;ClusterMaxSizeDiff=0.0818182;ClusterMaxEditDist=0.266371;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=440;DistBack=6;DistForward=24936;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=11:68892130-68892155;PctSeqSimilarity=0.9392;PctSizeSimilarity=0.98;PctRecOverlap=0.9755;SizeDiff=-9;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=96;MatchId=933.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:0:11:0:8:./.:1:1:2:8:./.:1:8:./.:2:14:.:5819:.
chr11	68950356	HG2_PB_SVrefine2PBcRplusDovetail_1897	A	ATTTATTTTTTGTTGAGACATAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGATTACAGGTGCCCGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCATCTTGGCCTCCCAAAGTGCTGGGATTGCAGGCGTGAGCCACCGTGCCTGGCTGAGAAAGCCCTTCTTTACAGTGGAATGCCAGCAGACACACGTAGAAGGAACAGTAGTGTTAGGAAGTGGCAATTTTGCAACCATCAGAGTAATATATGATTTAGGCAAGAGTCACGGTCATGGATGGATGTGGACTGTTGGGGCCAAGTTTAAGAAGGATGAGGTTATTTCAATGGCCTCAAAGTATCTTGCCACAAATGACTTACGACTTCCAAAGGAAAAAATGGTAACTTTGCAGTAGAAAACACGACCTTGGCCGGACGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATAGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCTAGATTGCGCCACTGTACTCCAGCCTGGGCGACAGAGCCAGACTCCGTCTCAAAAAAAAAAAAGAAAACACGACCTTAACGAAGTGATCAAAGGTCACGTCACCAACACTGGGGTGAGCTGACATCAAGTGCCTGCCAGGACTCAAGGAGGGCACAGCATCTATTCTGTGTGTCCTGTCCCCAAAGACACAGTACCTAAATCAAATAAAGGAAACATCAACCAGACACAAATCCAGGAACAAGTGCAAATACCTCACTTGTCCTGTTCAAAATGCTAATATAAGAAAGACAAAGCAAGAAGCAAAGAATCGTTCAAAATAAAAGAACGTGGGCCAGGCGTGGTGACTCATGCCCGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACCTGAGATCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGTGGGCCCCTGTAATCCCAGCTGCTTTGGAGGCTGAGACAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCTGTGAGCCAAGATTGCACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAACAAACAAACAAACACAAAATAAAAGAATGTAAAGAAACATGATGCCACATGCAATGATTGATCCTGTTTTGAAACAACATGCTGTGAAAACATTGGGAAAATTGGAAGAACGTGAGCAGGGACTCTTCGTTAGATGATAGTTTTGTTTCAATGGTGATTTTTCTGCATGTAATGATTATTGAAGATTATGGTGGCTGGATAAGAATTGAGGCCCTTCCCTTTGTCTCTTGTCCTCTCAGTGGCCACCTTGCTGGCAGAACAGGATCTGGGATCGACATCGGGCTTGACAGAGCCCTGTTCCTTATTCTCCCAGCCAGATGCCTCATGGTGACCCCAGAGTACATGGGGCTCCTCCTGCCACTCTCCTGAGAATACCTTGTTCTCTCTTTTCACCACCCCTGCCAATGCCACCCATGCCCCAACCCCTTCTCCATCACTGAGGAATCTTGGCTTTCTCATGCATCCTGATGCCTGGCACAAAGTGTTCCTGACAAGGTGACAAAGGACACAACCCACAGTCCACCTTCCTGTGCTCACTGGTGTGGGAGGACATTGTCCAGCTGTGCGGATTCTTTACACCAAGAACCGATATGAATGAAGACATTTGGGGTCCTGCCTATTTCCTCATGAGACCCCATCACGGACACACCCAGACAATGTAGGTGCCCACAGGGGGGCATCTAAAGCTGTCGACTTGCTCCTCTTAAACCTGACGAAGACGCCACCAGACCTTCCCATCTGCCTCACAGCACAGGGGACGGCTGTGAGTTCCCTTTACGCAGCTGAGATCTCAGGTTTCAAACCATGTGCTGGCTCCTAATTTGATGCAGGTAAATGCGTTTCAAACCCTTAGTGAGTCGGCCCCTGCGGTGTGTGCAGCCTCGATGAGACCAGATGAGGGAAGCTTGGATCTGGCCGGGCAGATGTCTTCCGAGACTATCCTTCTGCACAGACCGACAGCTGGGCTGCTATTGCGTTATCAGTTGGGCTCATCACACATGACCGATGAAGCCGGGGAGACATCATGTCAGTCACCATGTCCTGCAACGCTTCAATCTTCGTAGTTTGATGATTTCATTTCAGATCTCTGCATCTTCGCAGGAATCAGCTGGTGAACTCATATGTCTAAATACCTCTTCCCTGTTATCTTTCACTTTAATATCTAAGACCTCCCCAAATTGCCTTTATTTATGGATAAAACAGACCATTTCTCCCTCCTAACAGTAAACAGTGTTCGCTAAGAAATGAAATATTTTCAACGATGAATTTCAGCGATTTTCCATTTTCCTGGACCTAATTGAATGAGTAGATGCTTTATCAGCAATGGCTCATGACAAAATGGATGCGTGCTCCAAAATTGCAGCCATGCCAAATGCATTTTGCTTCTTTAATGTTTTCTGATCATTTCCAGAGCGGCTTTTGTCACGGGAAGCTCCATGGGTCATGAGTGACTCTTCTCTATAACTGAATTCTTGTCCCTCCCCAGGTTGGGGAGCAGCCTTGACAGGCTGCGATGTCCATTCTTTATGAAGTCGTATCCCAGCATTGGAAATTGGAAAGCAGAAGTCTTTAGGACACCACGGCTGGCTTGAACCTTTGGCCTTTTGAGGGTGTCCGTTGGCGTCCATCACCTACCACTTATGTTCTCACATTTCAAACCATGTGCTGGATTCTAACCCCACACGGTATCATTCTCTGAATCCGTGTTAACCCCAGCTGCACACGGATTAATTATGGATGATAAAGAGACTCTGGGCTAATGCTACAAAGAGCTCCAGGCTGAGCCAGACTCTCTGGGCAAACTTGTAGCATATTTAATGGAGAGGGTCAAGTTAGCACAGACTTTTATTTTGCCCTGGGTTTTGAGAAATTATTTTCACCAAGAAACAACTGTAGCCAAGCACAGCCTGGGCGGAGAAGAGAGGCCAGGCCAGCAAGGATGGCACAGGGTGCAGGAGGGGGCCCAGGGGTGGTGGAGCCGGGGTGTGCGGCGGGGCCATTGTCACTTGAGTTTTATTCAATGTCATGGTTCTACTTTTATTTCAACTTCTTCCTTACATCGGTGGCTCATTTTGTAGTTGCAATTTTGTCTTCTTTTTCTTTTCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7563:HG4_PB_pbsv_12438:HG2_PB_PB10Xdip_6161:HG2_PB_PB10Xdip_6160:HG4_PB_SVrefine2Falcon1Dovetail_7595:HG2_Ill_SVrefine2DISCOVARplusDovetail_2203:HG2_10X_SVrefine210Xhap12_8684:HG3_Ill_SVrefine2DISCOVARDovetail_9043:HG2_PB_SVrefine2PBcRplusDovetail_1897:HG2_PB_SVrefine2PB10Xhap12_8963:HG2_PB_SVrefine2Falcon2Bionano_6061:HG4_PB_SVrefine2PBcRDovetail_6266:HG3_PB_SVrefine2PBcRDovetail_5832:HG4_Ill_SVrefine2DISCOVARDovetail_8802:HG2_PB_SVrefine2Falcon1plusDovetail_1991;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8963:HG2_PB_SVrefine2PBcRplusDovetail_1897:HG3_Ill_SVrefine2DISCOVARDovetail_9043;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0368029;ClusterMaxSizeDiff=0.036241;ClusterMaxEditDist=0.10788;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=3500;DistBack=28274;DistForward=172;DistMin=172;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=173;REFWIDENED=11:68950357-68950529;PctSeqSimilarity=0.9987;PctSizeSimilarity=1;PctRecOverlap=0.986;SizeDiff=0;StartDistance=-49;EndDistance=-49;GTMatch=0;TruScore=99;MatchId=934.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:78:1/1:0:32:2:25:./.:0:0:0:5:1/1:0:20:1/1:2:371:.:5819:.
chr11	68983109	HG4_Ill_GATKHCSBGrefine_8601	C	CCATCCATCCATCCATCCATCCATCCATCCATCCATCCGCTTACTCACCCACATGGTCTCCCACCCATTCACCCATTCACCTATTCATCCATCCATCCACCCATGTGTTCATACATACATATATACATATGCCCATCCATCCATACATTTAACCATCCACTCATCCACCACCCACCCATCCATCCACTCATTTATTAACCCATCTATCCATCCATATATCCATTGATTCATATATACATATACCTGTCCATCATCCATCTATCCACATATCCATCCATCTGTAAATTATCAAATTGTTCATTTGTCTCTATACTTATACATTATTCCGTCCATCCATCATCTATCCACCTATTCATGCATGAATCCACCCATCCATTCATCCATCCATCCACCTACCCACCCATCCATTTATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATCCACCCATCCACCCACCCACCCACCCATTTATCCATCCATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCATTTATCCATCCGTCCATCCGTCCACTCATCTATCCATCCATCCATCCACCCACCCACCCATCCATTTGTCCATCTGTCCATCCATCCACTCATTCATCCATCCAT	20	PASS	ClusterIDs=HG3_Ill_MetaSV_901:HG2_PB_HySA_22587:HG3_PB_HySA_18715:HG4_Ill_manta_2949:HG4_Ill_MetaSV_850:HG4_Ill_GATKHCSBGrefine_8601:HG2_Ill_MetaSV_817:HG4_PB_HySA_18066:HG2_Ill_breakscan11_4297:HG2_PB_PB10Xdip_6164:HG2_PB_PB10Xdip_6165:HG4_PB_pbsv_12440:HG2_PB_pbsv_12453:HG3_PB_HySA_18714:HG2_PB_assemblyticsfalcon_4493:HG3_PB_assemblyticsfalcon_4491:HG4_PB_SVrefine2Falcon1Dovetail_7597:HG2_Ill_SVrefine2DISCOVARplusDovetail_2205:HG3_Ill_SVrefine2DISCOVARDovetail_9045:HG3_PB_SVrefine2PBcRDovetail_5834:HG2_PB_SVrefine2PB10Xhap12_8965:HG2_PB_SVrefine2Falcon2Bionano_6063:HG4_PB_SVrefine2PBcRDovetail_6268:HG4_Ill_SVrefine2DISCOVARDovetail_8804:HG2_PB_SVrefine2PBcRplusDovetail_1899:HG2_PB_SVrefine2Falcon1plusDovetail_1993:HG3_PB_SVrefine2Falcon1Dovetail_7565;NumClusterSVs=27;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_8601:HG4_Ill_MetaSV_850:HG4_Ill_manta_2949;NumExactMatchSVs=3;ClusterMaxShiftDist=0.1827;ClusterMaxSizeDiff=0.1827;ClusterMaxEditDist=0.249595;PBcalls=18;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=650;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=50;REFWIDENED=11:68983100-68983149;PctSeqSimilarity=0.9876;PctSizeSimilarity=0.9754;PctRecOverlap=0.9754;SizeDiff=16;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=935.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:./.:0:3:0:11:./.:0:15:2:17:1/1:0:29:1/1:4:74:.:.:.
chr11	69061499	HG4_Ill_Krunchall_17163	C	CAGCCCCACCCACCTGGGCTAGCCCCACCCCAAGGAGCCCCACCCACCTGGGCTAGCCCCACCCCCAAGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_6168:HG2_PB_pbsv_12455:HG4_Ill_svaba_15536:HG3_PB_pbsv_12144:HG3_Ill_svaba_15630:HG2_Ill_svaba_15477:HG4_Ill_svaba_15535:HG3_Ill_svaba_15629:HG2_Ill_svaba_15476:HG4_PB_pbsv_12442:HG4_Ill_svaba_15534:HG3_Ill_svaba_15628:HG2_Ill_svaba_15475:HG2_10X_SVrefine210Xhap12_8689:HG3_PB_HySA_18716:HG4_PB_SVrefine2PBcRDovetail_6270:HG4_Ill_scalpel_11426:HG4_Ill_SVrefine2DISCOVARDovetail_8807:HG4_Ill_Krunchall_17163:HG4_Ill_GATKHC_19868:HG4_Ill_GATKHCSBGrefine_8603:HG4_Ill_250bpfermikitraw_16392:HG4_Ill_150bpfermikitraw_15757:HG3_PB_SVrefine2PBcRDovetail_5836:HG3_Ill_scalpel_11922:HG3_Ill_manta_2831:HG3_Ill_Spiral_12910:HG3_Ill_Krunchall_16558:HG3_Ill_GATKHC_19750:HG3_Ill_GATKHCSBGrefine_8256:HG3_Ill_250bpfermikitraw_16085:HG3_Ill_150bpfermikitraw_15622:HG2_PB_SVrefine2PBcRplusDovetail_1901:HG2_PB_SVrefine2PB10Xhap12_8967:HG2_PB_SVrefine2Falcon2Bionano_6065:HG2_Ill_scalpel_11733:HG2_Ill_manta_3469:HG2_Ill_SpiralSDKrefine_2834:HG2_Ill_SVrefine2DISCOVARplusDovetail_2207:HG2_Ill_Krunchall_16873:HG2_Ill_GATKHC_19899:HG2_Ill_GATKHCSBGrefine_8361:HG2_Ill_250bpfermikitraw_16546:HG2_Ill_150bpfermikitraw_15609:HG3_PB_assemblyticsfalcon_4493:HG2_Ill_breakscan11_4299:HG2_PB_HySA_22589:HG4_PB_HySA_18069:HG2_PB_PB10Xdip_6169;NumClusterSVs=49;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15609:HG2_Ill_250bpfermikitraw_16546:HG2_Ill_GATKHCSBGrefine_8361:HG2_Ill_GATKHC_19899:HG2_Ill_Krunchall_16873:HG2_Ill_SVrefine2DISCOVARplusDovetail_2207:HG2_Ill_SpiralSDKrefine_2834:HG2_Ill_manta_3469:HG2_Ill_scalpel_11733:HG2_PB_SVrefine2Falcon2Bionano_6065:HG2_PB_SVrefine2PB10Xhap12_8967:HG2_PB_SVrefine2PBcRplusDovetail_1901:HG3_Ill_150bpfermikitraw_15622:HG3_Ill_250bpfermikitraw_16085:HG3_Ill_GATKHCSBGrefine_8256:HG3_Ill_GATKHC_19750:HG3_Ill_Krunchall_16558:HG3_Ill_Spiral_12910:HG3_Ill_manta_2831:HG3_Ill_scalpel_11922:HG3_PB_SVrefine2PBcRDovetail_5836:HG4_Ill_150bpfermikitraw_15757:HG4_Ill_250bpfermikitraw_16392:HG4_Ill_GATKHCSBGrefine_8603:HG4_Ill_GATKHC_19868:HG4_Ill_Krunchall_17163:HG4_Ill_SVrefine2DISCOVARDovetail_8807:HG4_Ill_scalpel_11426:HG4_PB_SVrefine2PBcRDovetail_6270;NumExactMatchSVs=29;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.0979021;ClusterMaxEditDist=0.20979;PBcalls=14;Illcalls=34;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=21;HG3count=15;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=69;DistBack=-1;DistForward=25;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=96;REFWIDENED=11:69061500-69061595;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=936.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:4:26:1/1:1:7:3:15:1/1:1:23:0:12:1/1:0:30:./.:.:.:.:627:.
chr11	69312645	HG2_PB_SVrefine2Falcon2Bionano_6066	T	TTGCAGGTATAGGCGGAGGGGTGCAGGTATAGGCAGAGGGGTGCAGGTATAGGTGGAGGGGTGGAGGTATAGGTGGAGGACTGCAGGTATAGGTGGAGGGGTGTGGGTATAGGTGGAGGGGTGCAAGTGTAGGTGGAGGGGTGCAGGTATAGGCGGAGGGGTGCATGTGTAGGTGGAGGGGTGCAGGTATAGGTGAAGGGGTGCAGGTATAGGTGAAGGGGTGCAGGTACAGGTGGAGGGGTGCAGGTATAGGCGGAGGGGTGCAGGTATAGGTGGAGGACTGCAGGTATAGGTGGAGGGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7599:HG2_PB_HySA_22590:HG4_PB_pbsv_12443:HG3_PB_pbsv_12145:HG2_PB_pbsv_12456:HG2_PB_SVrefine2Falcon1plusDovetail_1995:HG3_PB_SVrefine2Falcon1Dovetail_7567:HG2_PB_SVrefine2PBcRplusDovetail_1902:HG2_PB_SVrefine2PB10Xhap12_8968:HG2_PB_SVrefine2Falcon2Bionano_6066:HG3_PB_SVrefine2PBcRDovetail_5837:HG4_PB_SVrefine2PBcRDovetail_6271;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6066:HG2_PB_SVrefine2PB10Xhap12_8968:HG2_PB_SVrefine2PBcRplusDovetail_1902;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0755337;ClusterMaxSizeDiff=0.0755337;ClusterMaxEditDist=0.236453;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=300;DistBack=15478;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=596;REFWIDENED=11:69312646-69313241;PctSeqSimilarity=0.971;PctSizeSimilarity=0.9772;PctRecOverlap=0.1824;SizeDiff=-7;StartDistance=-248;EndDistance=-248;GTMatch=0;TruScore=71;MatchId=937.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:55:1/1:2:19:3:24:1/1:4:691:6:672:./.:1:2:1/1:1:9:.:.:.
chr11	69941354	HG2_Ill_250bpfermikitraw_16561	A	AAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGG	20	PASS	ClusterIDs=HG2_PB_pbsv_12461:HG4_Ill_GATKHC_19883:HG4_PB_pbsv_12447:HG4_Ill_GATKHCSBGrefine_8606:HG4_Ill_250bpfermikitraw_16407:HG2_Ill_GATKHC_19914:HG2_Ill_250bpfermikitraw_16561:HG3_Ill_GATKHC_19772:HG2_Ill_GATKHCSBGrefine_8363:HG2_PB_assemblyticsfalcon_4502:HG2_PB_PB10Xdip_6181:HG2_PB_PB10Xdip_6182;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16561:HG2_Ill_GATKHC_19914:HG4_Ill_250bpfermikitraw_16407:HG4_Ill_GATKHCSBGrefine_8606:HG4_Ill_GATKHC_19883;NumExactMatchSVs=5;ClusterMaxShiftDist=0.159292;ClusterMaxSizeDiff=0.159292;ClusterMaxEditDist=0.218487;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=42692;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=225;REFWIDENED=11:69941337-69941561;PctSeqSimilarity=0.9636;PctSizeSimilarity=0.9286;PctRecOverlap=0.9298;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=939.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:42:1/1:5:29:2:11:./.:4:0:2:6:./.:1:19:./.:.:.:.:.:.
chr11	70217432	HG2_PB_SVrefine2Falcon2Bionano_6070	A	ATATTCTGTTGTTGGGTGGCATGTTCTATATTCTGTTGTTGGGTAGAGTGTTCTATATTCTGTTGTTTGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGCATGTTCTATATTCTGTTGTTGGGTGGCATGTTCTATATTCTCTTGGGTGGATTGTTCTATATTCTGTTGTTGGGTGGATTGTTGTATATTCTGTTGTTGGGTGGTGTGTTCTATATTCTGTTGTTGGGTAGCGTGCTCTGTCTTCTGTTGTTGGGTGGCGTGTTCTATCTTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTTTTGGGTGGATTGTATATTCTGGTGTTGGGTGGATTGTTCTATCTTCTGTTGTTGGGTGGAGTGTTCTATATTCTGTTGTTGGGTGGAATGTTGTCTATTCTGTTGTTGGGTGGATTGTTCTATATTCTGTTGTTGGGTGGTGTGTTTTATATTCTGTTGTTAGGTAGCGTGTTGTATATTCTGTTGTTGGGTGGCGTGTTCTATATTTTGTTGATGGCGTGTTCTATATTCTGTTGTTGGGTGGATTGTTCTATCTTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGATTGTTCTATCTTCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGGTGGCGTGTTCTAAATTCCGTTGTTGGGTGGATTGTTCTATATTCTGTTTTTGGGTGGATTGTTCTATATTCTGTTGTTGGTGTAGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTATATTCCGTTGTTGGGTGGATTGTTCTATATTCTGTTGTTGGGTGGATTGTTCTGTATTCCGTTGTTGGTGTAGTGTTCTATATTCTGTTGTTGGTGTAGTGTTCTATATTCTGTTGTTGGTGCAGTGTTCTATATTCTGTTGTTGGTGCAGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTATATTCCGTTGTTGGGTGGATTGTTCTATATTCCGTTGTTGGGTGGATTGTTCTATATTCTGTTGTTGGGTGGATTGTTCTATATTCTGTTGTTGGTGTGGTGTTCTATATTCTGTTGTTGGTGGAGTGTTCTACATTCTGTTGTTGGGTGGCATGTTCTATATTCTGTTGTTGGGTGGATTGTTCTATATTCCGTTGTTGGTGTAGTGTTCTATATTGTGTTGTTGGGTGGATGTTCTATATTCCGTTGTTGGATGGCATGTTCTATCTTCCATTATTGGGTGGATTGTTCTGTATTCTGTTGTTGGGTGGCATGTTCTATATTCTGTTGTTGGGTGGCATGTTCTATCTTCTGTTGTTGGGTGGCGTGTTCTGTCTTCTGTTGTTGGGTGGCGTGTTCTGTATTCTGTTGTTGGGTGGCATGTTCTATCTTCTGTTGTTGGGTGGCGTGTTCTATCTTCTGTTGTTGCGCGGCATGTTCTGTATTCTGTTGTTGGGTGGCGTGTTCTGTATTCTGTTGTTGGGTGGCGTGTCCTATCTTCTGTTGTTGGGTGGAGTGGTCTATCTTCTGTTGTTGGGTGGAGTGTTCTGTATTCTGTTGTGTGGAATGTTGTATATTCTGTTGTTGGGTGGATTGTTGTATATTCTCTTGTTCGGTGGCGTGTTTTATATTCTGTTGTTGAGTGGCGTGTTGTATATTCTGTTGTTGGGTGGTGTGTTCTATATTCTGTTGTTGGGTGGATTGTTCTATATTCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGGTGGATTGTTCTATCTTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGCATGTTCTATCTTCTGTTGTTGCGTGGCGTGTTCTATCTTCTGTTGTTGGGTGGATTGTTCTATATTCTGTTGTTGGGTGGCTTGTTCTGTATTCTGTTGTTGGGTGGCATGTTCTGTATTCTGTTGTTGGTGGAGTGTTCTATCTTCTGTTGTTGGGTAGATTGTTCTATATTCTCTTGTTGGGTGACAAGTTCTATATTCCGTTGTTGGATTGTGTGTTGTATATTCCGTTGTTGGGTGGTGTGTTCTATATTCTGTTGTTGGTGGCATGTTCTATATTCTGTTGTTGGGTGGAGTGTTGCATATTCTGTTGTTGGGTGGTGTGTTCTGTATTCTGTTGTTGGGTGGATTGTTCTATATTCCATTGTTGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGAGTGCTGCATATTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTATATTCTGGCGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTATATTTTGTTGGTGGAGTGTTCTATATTCTGTTGTTGGGTGGAGTGTTGTATATTCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGGTGGTGTGTTCTATAATCTCTTGCTAGGTAGAGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTGTATTCTGTTGTTGGTGGGGTGTTCTATATTCTGTTGTTGGTGGAGTGTTCTGTATTCTGTTGGTTGGAGTGTTCTACTATTGTTGGGTGGAGTGTTCTATCTTCTGTTGGGTGGAGTGTTCTGCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGTGTAGTGTTCTATATTCTGTTGTTGGGTAGTGTGTTCTATATTCTCTTGTTGGGTGGCGCGTTCTATATTCTCTTGTTGGGTGGCGCGTTCTATATTCTGTTGCTGGGGGGATTGTTGTATATTCTGTTGGGTGGAGTGTTCTATCTTCCGTTGTTAGGTGAAGTGTTCTATATTCTGTTGTTGAGTGGAGCATTCTATCTTCTGTTGTTGGGTGGAGTGTTCTATCCTCTGTTGTTGGGTAGAGCATTCTATCCTCTGTTGTTGGGTGGAGGGTTCTGTCTTCTGTTGTTAGGTGGCATGTTCTATATTCTGTTGTTGGGTGGATTGTTCTATCTTCTGTTGTTGGATGGCGTGTTCTATCTTCTGTTGTTGGGTGGATGGATTGTTCTGTATTCTGTTGGGTGGCGTGTTCTATCTTCTGTTGTTGGGTGGATGGATTGTTCTGTATTCTGTTGGGTGGCATGTTCTATCTTCTGTTTTTGGGTGGAGCGTTCTATCTTCTGTTGGGTGGCGCATTCTATATTCTGTTGTTGGGTGGCGTGTTCTGTATTCTGTTGTTGGGTGGCTTGTTCTGTATTCTGTTGTTGGGTGGCATGTTCTGTATTCTGTTGTTGGTGGAGTGTTCTATCTTCTGTTGTTGGGTAGATTGTTCTATATTCTCTTGTTGGGTGACAAGTTCTATATTCCGTTGTTGGATTGTGTGTTGTATATTCCGTTGTTGGGTGGTGTGTTCTATATTCTGTTGTTGGTGGCATGTTCTATATTCTGTTGTTGGGTGGAGTGTTGCATATTCTGTTGTTGGGTGGTGTGTTCTGTATTCTGTTGTTGGGTGGATTGTTCTATATTCCATTGTTGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGAGTGCTGCATATTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTATATTCTGGCGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTATATTTTGTTGGTGGAGTGTTCTATATTCTGTTGTTGGGTGGAGTGTTGTATATTCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGGTGGTGTGTTCTATAATCTCTTGCTAGGTAGAGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTGTATTCTTTTGTTGGTGGGGTGTTCTATATTCTGTTGTTGGTGGAGTGTTCTGTATTCTGTTGGTTGGAGTGTTCTACTATTGTTGGGTGGAGTGTTCTATCTTCTGTTGGGTGGAGTGTTCTGCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGGTGGCGTGTTGTATATTCTGTTGTTGGTGTAGTGTTCTATATTCTGTTGTTGGGTAGTGTGTTCTATATTCTCTTGTTGGGTGGCGCGTTCTATATTCTCTTGTTGGGTGGCGCGTTCTATATTCTGTTGCTGGGGGGATTGTTGTATATTCTGTTGGGTGGAGTGTTCTATCTTCCGTTGTTAGGTGAAGTGTTCTATATTCTGTTGTTGAGTGGAGCATTCTATCTTCTGTTGTTGGGTGGAGTGTTCTATCCTCTGTTGTTGGGTAGAGCATTCTATCCTCTGTTGTTGGGTGGAGGGTTCTGTCTTCTGTTGTTAGGTGGCATGTTCTATATTCTGTTGTTGGGTGGATTGTTCTATCTTCTGTTGTTGGATGGCGTGTTCTATCTTCTGTTGTTGGGTGGATGGATTGTTCTGTATTCTGTTGGGTGGCGTGTTCTATCTTCTGTTGTTGGGTGGATGGATTGTTCTGTATTCTGTTGGGTGGCATGTTCTATCTTCTGTTTTTGGGTGGAGCGTTCTATCTTCTGTTGGGTGGCGCATTCTATATTCTGTTGTTGGGTGGCGTGTTCTGTATTCTGTTGTTGGGTGGCCTGTTCTGTATTCTGTTGTTGGGTGGAGTGTTGTATCTTCTGTTGTTGGATGGCATGTTCTATCTTCTGTTGTTGGGTGGATTGTTCTATCTTCTGTTGTTGGATGGCATGTTCTATCTTCTGTTGTTGGGTGGATGGATTGTTCTGTATTCTGTTGGGTGGCATGTTCTATCTTCTGTTGTTGGGTGGAGCGTTCTATCTTCTGTTGTTGGGTGGAGCGTTCTATCTTCTGTTGTTGGGTGGAGCGTTCTATCTTCTGTTGGGTGGCACGTTCTGTATTCTGTTGTTGGGTGGCGTGTTCTGTATTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTGGGTGGCATGTTCTATATTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGTGGCGTGTTCTACTGTTGTTGGGTGGAGTGTTCTATCTTCTGTTGTTGGGTGGCGTGTTCTATCCTCTGTTGTTGGGTGGAGTGTTCTGTATTCTTTCGTTGGGTAGATTGTTCTATATTCTCTTGTTGGGTGGCATGTTATATTTTCTGTTGTTGGGTGGCGTGTTCTGTATTCTGTTGTTGGGTTACATGTTCTATATTCCATTGTTGGGTGGCATGTTCTATATTCTGTTGTTGGTGGCGTGTTCTATATTCTGTTGTTTGTGGAGTGTTCTATATTCTGTCGTTTGTGGCGTGTTTTATATTCTGTTGGGTGGTGTGTTCTGTATTCTGTTGTTGGGTGGCGTGTTCTATATTCTGTTGTTGGTGGCATGTTCTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2000:HG2_PB_pbsv_12465:HG2_PB_PB10Xdip_6187:HG4_PB_HySA_18077:HG2_PB_assemblyticsfalcon_4507:HG4_PB_SVrefine2Falcon1Dovetail_7603:HG3_PB_SVrefine2Falcon1Dovetail_7570:HG2_PB_SVrefine2PBcRplusDovetail_1906:HG2_PB_SVrefine2PB10Xhap12_8973:HG2_PB_SVrefine2Falcon2Bionano_6070;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6070:HG2_PB_SVrefine2PB10Xhap12_8973:HG2_PB_SVrefine2PBcRplusDovetail_1906;NumExactMatchSVs=3;ClusterMaxShiftDist=0.130733;ClusterMaxSizeDiff=0.130733;ClusterMaxEditDist=0.195917;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=5467;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=207;REFWIDENED=11:70217433-70217639;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9998;PctRecOverlap=0.9876;SizeDiff=-1;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=99;MatchId=940.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:0:16:0:14:./.:1:7:0:5:1/1:0:24:1/1:0:392:.:5249:.
chr11	71091391	HG2_PB_SVrefine2Falcon2Bionano_6077	A	AATGGATGGGTGGAGAGATGGTTGGATGGATGGATGAGTGGGTGGGTGGGTGGATGGAAGGAAGAGTGGATGGGTGGAGAGATGGTTGGATGGACGGATGAGTGGGCGGGTGGGTGGATGGAAGAAAGAGTGGATGGGTGGAGAGATGGTTGGATGGATGGATGAGTGGGTGGGTGGGTGGATGGAAGGAAGAATGGATGGGTGGAGAGATGGTTGGATGGATGGATGAGTGGGCGGGTGGGTGGATGGAAGGAAGAATGGATGGGTGGAGAGATGGTTGGATGGATGGATGAGTGGGCGGGTGGGTGGATGGAAGGAAGAATGGATGGGTGGAGAGATGGTTGGATGGATGGATGAGTGGGTGGGTGGTTGGATGGAAGGAGGAATGGATGGGTGGAGAGATGGTTGGATGGATGGAGGAGAGGGTGGATGGGTGGATGGAAGGAAGAATGGATGGGTGGAGAGATGGTTGGATGGATGGATGAGTGGGCGGGTGGGTGGATGGAAGGAAGAATGGATGGGTGGGGAGATGGTTGGATGGATGGATGAGTGGGTGGGTGGGTGGATGGAAGGAAGAATGGATGGGTGGAGAGATGGTTGGATGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7609:HG2_PB_pbsv_12471:HG2_PB_HySA_22617:HG3_PB_pbsv_12159:HG2_PB_SVrefine2PB10Xhap12_8977:HG3_PB_SVrefine2Falcon1Dovetail_7577:HG2_PB_SVrefine2PBcRplusDovetail_1911:HG3_PB_pbsv_12160:HG2_PB_pbsv_12472:HG2_PB_SVrefine2Falcon2Bionano_6077:HG3_PB_SVrefine2PBcRDovetail_5845:HG3_PB_HySA_18751:HG4_PB_SVrefine2PBcRDovetail_6280:HG2_PB_SVrefine2Falcon1plusDovetail_2005;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6077:HG2_PB_SVrefine2PBcRplusDovetail_1911;NumExactMatchSVs=2;ClusterMaxShiftDist=0.33101;ClusterMaxSizeDiff=0.33101;ClusterMaxEditDist=0.362983;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=604;DistBack=17335;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=556;REFWIDENED=11:71091392-71091947;PctSeqSimilarity=0.9916;PctSizeSimilarity=0.9934;PctRecOverlap=0.719;SizeDiff=4;StartDistance=-168;EndDistance=-168;GTMatch=1;TruScore=90;MatchId=943.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:1/1:1:29:0:24:1/1:5:202:9:273:./.:0:2:0/1:5:29:.:.:.
chr11	71098830	HG4_Ill_250bpfermikitraw_16421	G	GTCCCCGACATCCTGACTGTTCTGACATTCCAACAGTCCTGACGTGCTGACAGTCACAACATCCCAACAGTCCTGACATTCCAACAGTCCTGATATTCCAACA	20	PASS	ClusterIDs=HG2_PB_pbsv_12473:HG2_PB_HySA_22618:HG2_PB_PB10Xdip_6198:HG4_Ill_GATKHC_19900:HG4_Ill_GATKHCSBGrefine_8611:HG4_Ill_250bpfermikitraw_16421:HG4_Ill_150bpfermikitraw_15786:HG2_Ill_GATKHC_19925:HG2_Ill_GATKHCSBGrefine_8367;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8367:HG2_Ill_GATKHC_19925:HG4_Ill_150bpfermikitraw_15786:HG4_Ill_250bpfermikitraw_16421:HG4_Ill_GATKHCSBGrefine_8611:HG4_Ill_GATKHC_19900;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0878049;ClusterMaxSizeDiff=0.0878049;ClusterMaxEditDist=0.204878;PBcalls=3;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=102;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=739;REFWIDENED=11:71098529-71099267;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=944.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:38:0|1:34:2:3:32:./.:6:0:3:21:0/1:7:5:./.:.:.:.:.:.
chr11	73710014	HG2_PB_SVrefine2Falcon1plusDovetail_2011	A	ACCTAGGCTAGGGTGCAGTGGTGTAAGCTCGGCTCACTGCAACCTCCGCCTCCTGGGCTCAAGTGATCCTCCCACCTGAGCCCCCCGAGTAGCTGGGACCGCAGGCACATGTCACCATGCCTGGCTAAAAAGGGAAACTTTTAATTTAATTCAATTCAATTTAATTTTTTTTTTGAGACAGAGTCTCG	20	PASS	ClusterIDs=HG3_PB_HySA_18784:HG2_Ill_SVrefine2DISCOVARplusDovetail_2232:HG4_PB_pbsv_12468:HG2_PB_HySA_22647:HG4_PB_HySA_18120:HG2_PB_PB10Xdip_6210:HG2_PB_PB10Xdip_6209:HG3_PB_pbsv_12173:HG2_PB_pbsv_12482:HG4_PB_SVrefine2PBcRDovetail_6284:HG4_PB_SVrefine2Falcon1Dovetail_7615:HG4_Ill_SVrefine2DISCOVARDovetail_8832:HG3_PB_SVrefine2PBcRDovetail_5851:HG3_PB_SVrefine2Falcon1Dovetail_7584:HG3_Ill_SVrefine2DISCOVARDovetail_9071:HG2_PB_SVrefine2PBcRplusDovetail_1918:HG2_PB_SVrefine2PB10Xhap12_8984:HG2_PB_SVrefine2Falcon2Bionano_6083:HG2_PB_SVrefine2Falcon1plusDovetail_2011:HG2_10X_SVrefine210Xhap12_8713;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8713:HG2_PB_SVrefine2Falcon1plusDovetail_2011:HG2_PB_SVrefine2Falcon2Bionano_6083:HG2_PB_SVrefine2PB10Xhap12_8984:HG2_PB_SVrefine2PBcRplusDovetail_1918:HG3_Ill_SVrefine2DISCOVARDovetail_9071:HG3_PB_SVrefine2Falcon1Dovetail_7584:HG3_PB_SVrefine2PBcRDovetail_5851:HG4_Ill_SVrefine2DISCOVARDovetail_8832:HG4_PB_SVrefine2Falcon1Dovetail_7615;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0472441;ClusterMaxSizeDiff=0.0367454;ClusterMaxEditDist=0.222222;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=187;DistBack=6107;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=315;REFWIDENED=11:73710015-73710329;PctSeqSimilarity=0.9943;PctSizeSimilarity=0.9947;PctRecOverlap=0.1323;SizeDiff=-1;StartDistance=-163;EndDistance=-163;GTMatch=0;TruScore=70;MatchId=946.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:67:1/1:4:32:1:27:1/1:0:13:1:13:1/1:1:16:./.:.:.:.:.:.
chr11	74064905	HG2_Ill_150bpfermikitraw_15646	A	AGACGGGGTGGTGGCCGGGCAGACGGGCCCCCCACCTCCCAGAGGGGGCGGCCGGGCAGAGGCGCCCCCCACCTCCCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2014:HG3_PB_pbsv_12175:HG3_PB_HySA_18787:HG4_Ill_GATKHC_19934:HG4_Ill_GATKHCSBGrefine_8624:HG3_Ill_GATKHC_19807:HG3_Ill_GATKHCSBGrefine_8271:HG2_Ill_GATKHC_19951:HG2_Ill_GATKHCSBGrefine_8377:HG2_PB_PB10Xdip_6212:HG2_PB_PB10Xdip_6211:HG2_PB_HySA_22651:HG3_Ill_manta_2837:HG3_Ill_Spiral_12949:HG3_Ill_Krunchall_16604:HG3_Ill_250bpfermikitraw_16136:HG4_PB_HySA_18123:HG4_PB_pbsv_12470:HG2_Ill_manta_3475:HG4_Ill_Krunchall_17210:HG4_Ill_250bpfermikitraw_16446:HG4_Ill_150bpfermikitraw_15813:HG3_Ill_250bpfermikitraw_16135:HG2_Ill_Krunchall_16915:HG2_Ill_250bpfermikitraw_16590:HG2_Ill_150bpfermikitraw_15646:HG2_PB_pbsv_12484:HG3_PB_SVrefine2PBcRDovetail_5853:HG4_PB_SVrefine2PBcRDovetail_6287:HG3_PB_SVrefine2Falcon1Dovetail_7586:HG2_PB_SVrefine2PBcRplusDovetail_1921:HG2_PB_SVrefine2PB10Xhap12_8987:HG2_PB_SVrefine2Falcon2Bionano_6086:HG2_10X_SVrefine210Xhap12_8718:HG4_PB_SVrefine2Falcon1Dovetail_7618;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15646:HG2_Ill_250bpfermikitraw_16590:HG2_Ill_Krunchall_16915:HG3_Ill_250bpfermikitraw_16135:HG4_Ill_150bpfermikitraw_15813:HG4_Ill_250bpfermikitraw_16446:HG4_Ill_Krunchall_17210;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0927152;ClusterMaxSizeDiff=0.0915033;ClusterMaxEditDist=0.172185;PBcalls=16;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=77;DistBack=-19;DistForward=2;DistMin=-19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=11:74064897-74064924;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=947.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:./.:0:1:0:1:./.:4:6:0:9:1/1:0:33:./.:.:.:.:.:.
chr11	74368011	HG2_Ill_svaba_15515	G	GAGTGTTGAAGGCTCCAGCTATTATTGCATTGGTGTCTATCTCTCTCTCTTTAGCTCTAATAATATTTTCTTTATATATCTGGGTGCTCCAGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4302:HG4_PB_assemblyticsfalcon_4436:HG4_PB_SVrefine2Falcon1Dovetail_7619:HG2_PB_pbsv_12486:HG3_PB_pbsv_12178:HG3_PB_assemblyticsfalcon_4545:HG2_PB_assemblyticsfalcon_4544:HG4_PB_SVrefine2PBcRDovetail_6289:HG4_Ill_svaba_15585:HG4_Ill_manta_2956:HG4_Ill_SVrefine2DISCOVARDovetail_8836:HG4_Ill_Krunchall_17213:HG4_Ill_GATKHCSBGrefine_8627:HG4_Ill_250bpfermikitraw_16448:HG4_Ill_150bpfermikitraw_15815:HG3_PB_SVrefine2PBcRDovetail_5855:HG3_PB_SVrefine2Falcon1Dovetail_7588:HG3_Ill_svaba_15680:HG3_Ill_manta_2839:HG3_Ill_Spiral_12951:HG3_Ill_SVrefine2DISCOVARDovetail_9075:HG3_Ill_Krunchall_16607:HG3_Ill_GATKHCSBGrefine_8274:HG3_Ill_250bpfermikitraw_16138:HG3_Ill_150bpfermikitraw_15670:HG2_PB_SVrefine2PBcRplusDovetail_1923:HG2_PB_SVrefine2PB10Xhap12_8990:HG2_PB_SVrefine2Falcon2Bionano_6087:HG2_PB_SVrefine2Falcon1plusDovetail_2016:HG2_Ill_svaba_15515:HG2_Ill_manta_3477:HG2_Ill_SpiralSDKrefine_2872:HG2_Ill_SVrefine2DISCOVARplusDovetail_2234:HG2_Ill_Krunchall_16918:HG2_Ill_GATKHC_19953:HG2_Ill_GATKHCSBGrefine_8379:HG2_Ill_250bpfermikitraw_16592:HG2_Ill_150bpfermikitraw_15648:HG2_10X_SVrefine210Xhap12_8720:HG2_PB_PB10Xdip_6218:HG2_PB_PB10Xdip_6217;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8720:HG2_Ill_150bpfermikitraw_15648:HG2_Ill_250bpfermikitraw_16592:HG2_Ill_GATKHCSBGrefine_8379:HG2_Ill_GATKHC_19953:HG2_Ill_Krunchall_16918:HG2_Ill_SVrefine2DISCOVARplusDovetail_2234:HG2_Ill_SpiralSDKrefine_2872:HG2_Ill_manta_3477:HG2_Ill_svaba_15515:HG2_PB_SVrefine2Falcon1plusDovetail_2016:HG2_PB_SVrefine2Falcon2Bionano_6087:HG2_PB_SVrefine2PB10Xhap12_8990:HG2_PB_SVrefine2PBcRplusDovetail_1923:HG3_Ill_150bpfermikitraw_15670:HG3_Ill_250bpfermikitraw_16138:HG3_Ill_GATKHCSBGrefine_8274:HG3_Ill_Krunchall_16607:HG3_Ill_SVrefine2DISCOVARDovetail_9075:HG3_Ill_Spiral_12951:HG3_Ill_manta_2839:HG3_Ill_svaba_15680:HG3_PB_SVrefine2Falcon1Dovetail_7588:HG3_PB_SVrefine2PBcRDovetail_5855:HG4_Ill_150bpfermikitraw_15815:HG4_Ill_250bpfermikitraw_16448:HG4_Ill_GATKHCSBGrefine_8627:HG4_Ill_Krunchall_17213:HG4_Ill_SVrefine2DISCOVARDovetail_8836:HG4_Ill_manta_2956:HG4_Ill_svaba_15585:HG4_PB_SVrefine2PBcRDovetail_6289;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.0529101;ClusterMaxEditDist=0.113402;PBcalls=15;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=92;DistBack=3643;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=11:74368012-74368012;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=948.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:2:23:1:11:1/1:1:22:0:17:1/1:0:49:./.:.:.:.:.:.
chr11	75881883	HG4_Ill_250bpfermikitraw_16454	C	CCTGCCCCCCACCCCCGCCGCCCCGCCATTCCCCGTCCTTTCTTCTGGCCCCCAGCAGCT	20	PASS	ClusterIDs=HG4_CG_vcfBeta_7933:HG4_Ill_GATKHCSBGrefine_8631:HG2_Ill_manta_3480:HG4_PB_pbsv_12476:HG2_PB_PB10Xdip_6227:HG2_PB_PB10Xdip_6226:HG4_PB_assemblyticsfalcon_4443:HG3_PB_assemblyticsfalcon_4555:HG3_PB_HySA_18796:HG2_PB_HySA_22658:HG4_PB_HySA_18131:HG3_Ill_GATKHCSBGrefine_8278:HG2_Ill_GATKHC_19959:HG2_Ill_GATKHCSBGrefine_8382:HG4_Ill_Krunchall_17221:HG4_Ill_250bpfermikitraw_16454:HG3_Ill_250bpfermikitraw_16147:HG2_Ill_Krunchall_16925:HG2_Ill_250bpfermikitraw_16600:HG4_Ill_svaba_15594:HG3_Ill_svaba_15689:HG2_Ill_svaba_15524:HG2_PB_pbsv_12490:HG3_PB_pbsv_12183:HG2_PB_assemblyticsfalcon_4551:HG3_Ill_GATKHC_19818:HG4_Ill_GATKHC_19946;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16600:HG2_Ill_Krunchall_16925:HG3_Ill_250bpfermikitraw_16147:HG4_Ill_250bpfermikitraw_16454:HG4_Ill_Krunchall_17221;NumExactMatchSVs=5;ClusterMaxShiftDist=0.301887;ClusterMaxSizeDiff=0.301887;ClusterMaxEditDist=0.39604;PBcalls=11;Illcalls=15;TenXcalls=0;CGcalls=1;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=59;DistBack=0;DistForward=102681;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=11:75881882-75881884;PctSeqSimilarity=0.9922;PctSizeSimilarity=0.9833;PctRecOverlap=0.918;SizeDiff=-1;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=96;MatchId=950.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:45:1/1:1:23:4:22:1/1:0:16:0:20:1/1:0:42:./.:.:.:.:.:.
chr11	76313183	HG4_PB_HySA_18133	T	TCATCACAGAAGGTGTATGGAGCTGCTGTCAAGAGTGCTAGTGACAAAACTCACTTACTTAAAACTGACCGTCACAGAAGGTGTATGGAGCTGCTGTCAGAGTGCTAGTGACAAAACTCACTTACTTAAAACTGACCATCACAGAAGGTGTATGGAGCTGCTGTCAGAGTGCTAGTGACAAAACTCACTTACTTAAAACTGAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2019:HG2_PB_pbsv_12491:HG4_PB_HySA_18133:HG4_PB_pbsv_12478;NumClusterSVs=4;ExactMatchIDs=HG4_PB_HySA_18133;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0435835;ClusterMaxSizeDiff=0.0435835;ClusterMaxEditDist=0.213777;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=202;DistBack=79;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=268;REFWIDENED=11:76313104-76313371;PctSeqSimilarity=0.9975;PctSizeSimilarity=0.995;PctRecOverlap=0.9901;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=951.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:37:0|1:30:3:1:29:./.:6:2:8:0:0/1:32:5:./.:.:.:.:.:.
chr11	76645803	HG2_Ill_GATKHC_19969	C	CGGGAGAGGGAGGGAGACCGTGGAAAGAGAGGGAGAGGGAGACCGTGGGGAGAT	20	PASS	ClusterIDs=HG2_PB_HySA_22669:HG4_Ill_GATKHC_19958:HG3_Ill_Krunchall_16620:HG3_Ill_GATKHC_19826:HG3_Ill_250bpfermikitraw_16154:HG3_Ill_150bpfermikitraw_15682:HG2_Ill_GATKHC_19969:HG3_PB_HySA_18804:HG2_PB_pbsv_12496:HG4_PB_HySA_18141:HG3_PB_pbsv_12188:HG4_PB_SVrefine2Falcon1Dovetail_7625:HG3_PB_SVrefine2PBcRDovetail_5861:HG3_PB_SVrefine2Falcon1Dovetail_7595:HG3_Ill_SVrefine2DISCOVARDovetail_9086:HG3_Ill_Krunchall_16619;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHC_19969:HG3_Ill_150bpfermikitraw_15682:HG3_Ill_250bpfermikitraw_16154:HG3_Ill_GATKHC_19826:HG3_Ill_Krunchall_16620:HG4_Ill_GATKHC_19958;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0720721;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.25;PBcalls=8;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=10;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=94;DistForward=71194;DistMin=94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=108;REFWIDENED=11:76645706-76645813;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=952.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:./.:14:10:11:15:./.:22:1:8:14:0/1:22:14:./.:.:.:.:.:.
chr11	76990570	HG3_Ill_GATKHCSBGrefine_8284	G	GTGAACAGCAGCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTTGCCCAGGCTGGAATGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7628:HG2_PB_pbsv_12502:HG2_PB_HySA_22676:HG3_PB_pbsv_12193:HG3_PB_assemblyticsfalcon_4570:HG2_PB_assemblyticsfalcon_4560:HG4_PB_assemblyticsfalcon_4454:HG2_Ill_breakscan11_4305:HG2_PB_HySA_22675:HG3_PB_HySA_18808:HG3_PB_SVrefine2PBcRDovetail_5864:HG3_Ill_MetaSV_913:HG3_Ill_GATKHCSBGrefine_8284:HG2_Ill_MetaSV_827:HG2_Ill_GATKHCSBGrefine_8384:HG3_PB_SVrefine2Falcon1Dovetail_7600:HG2_PB_SVrefine2Falcon1plusDovetail_2025;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8384:HG2_Ill_MetaSV_827:HG3_Ill_GATKHCSBGrefine_8284:HG3_Ill_MetaSV_913:HG3_PB_SVrefine2PBcRDovetail_5864;NumExactMatchSVs=5;ClusterMaxShiftDist=0.133758;ClusterMaxSizeDiff=0.133758;ClusterMaxEditDist=0.178914;PBcalls=12;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=315;DistBack=0;DistForward=34854;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:76990571-76990585;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=953.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:21:./.:11:14:11:8:0|1:23:0:1:11:0/1:22:8:0/1:6:22:.:.:.
chr11	77043383	HG2_PB_SVrefine2Falcon2Bionano_6095	A	AGAGGGGGGGAAAGGGAAGGGAAGGGGAGGGGAGGGGAGGGGGGAGGGGGAGGGGGGAGGGGAGGGGAGGGGAGGGGGAGGGGGGAGGGGAGGGGGAGGGAGGGGGGAGGGAGGGGAGGGAGGGGGGAGGGGAGGGGGAGGGAGGGGGGAGGGGAGGGGGAGGGAGGGGGGAGGGGAGGGGGAGGGAGGGGGGAGGGGAGGGGGAGGGAGGGGGGAGGGGAGGGGGAGGGAGGGGGGAGGGGAGGGGGAGGGAGGGGGGAGGGGAGGGGAGGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7629:HG2_PB_PB10Xdip_6246:HG2_PB_PB10Xdip_6247:HG4_PB_pbsv_12488:HG2_PB_SVrefine2PB10Xhap12_9003:HG3_PB_HySA_18809:HG3_PB_pbsv_12194:HG3_PB_SVrefine2PBcRDovetail_5865:HG2_PB_SVrefine2PBcRplusDovetail_1931:HG2_PB_SVrefine2PB10Xhap12_9002:HG2_PB_SVrefine2Falcon2Bionano_6095:HG2_PB_HySA_22677:HG4_PB_SVrefine2PBcRDovetail_6299:HG2_PB_SVrefine2Falcon1plusDovetail_2026:HG3_PB_SVrefine2Falcon1Dovetail_7601;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6095;NumExactMatchSVs=1;ClusterMaxShiftDist=0.28479;ClusterMaxSizeDiff=0.28479;ClusterMaxEditDist=0.317152;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=272;DistBack=-59;DistForward=4;DistMin=-59;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=11:77043384-77043439;PctSeqSimilarity=0.9879;PctSizeSimilarity=0.9819;PctRecOverlap=0.9458;SizeDiff=-5;StartDistance=-13;EndDistance=-13;GTMatch=1;TruScore=97;MatchId=954.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:0:19:3:24:./.:0:2:2:1:./.:1:4:./.:.:.:.:.:.
chr11	78516320	HG3_Ill_Krunchall_16629	T	TCTCCCCACCCTCCACACCCCACCCCTCATTCTTCCCCACCCCCACTCCTCCTCCACCCACCCTTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8742:HG4_PB_HySA_18158:HG4_Ill_svaba_15614:HG3_PB_pbsv_12197:HG4_Ill_manta_2957:HG4_Ill_Krunchall_17238:HG4_Ill_GATKHC_19977:HG4_Ill_GATKHCSBGrefine_8632:HG4_Ill_Cortex_623:HG4_Ill_250bpfermikitraw_16474:HG3_Ill_svaba_15707:HG3_Ill_Spiral_12969:HG3_Ill_Krunchall_16629:HG3_Ill_GATKHCSBGrefine_8285:HG3_Ill_Cortex_659:HG3_Ill_250bpfermikitraw_16165:HG3_Ill_150bpfermikitraw_15696:HG2_Ill_svaba_15541:HG2_Ill_manta_3482:HG2_Ill_SpiralSDKrefine_2888:HG2_Ill_Krunchall_16944:HG2_Ill_GATKHC_19984:HG2_Ill_GATKHCSBGrefine_8385:HG2_Ill_Cortex_1484:HG2_Ill_250bpfermikitraw_16617:HG2_PB_PB10Xdip_6250:HG2_PB_PB10Xdip_6249:HG3_PB_HySA_18819:HG2_Ill_breakscan11_4306:HG2_PB_HySA_22688:HG2_PB_pbsv_12506:HG4_PB_pbsv_12491:HG4_PB_SVrefine2PBcRDovetail_6303:HG4_PB_SVrefine2Falcon1Dovetail_7633:HG4_Ill_SVrefine2DISCOVARDovetail_8858:HG3_PB_SVrefine2PBcRDovetail_5868:HG3_PB_SVrefine2Falcon1Dovetail_7604:HG3_Ill_SVrefine2DISCOVARDovetail_9095:HG2_PB_SVrefine2PBcRplusDovetail_1934:HG2_PB_SVrefine2PB10Xhap12_9006:HG2_PB_SVrefine2Falcon2Bionano_6098:HG2_PB_SVrefine2Falcon1plusDovetail_2030;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16617:HG2_Ill_Cortex_1484:HG2_Ill_GATKHCSBGrefine_8385:HG2_Ill_GATKHC_19984:HG2_Ill_Krunchall_16944:HG2_Ill_SpiralSDKrefine_2888:HG2_Ill_manta_3482:HG2_Ill_svaba_15541:HG3_Ill_150bpfermikitraw_15696:HG3_Ill_250bpfermikitraw_16165:HG3_Ill_Cortex_659:HG3_Ill_GATKHCSBGrefine_8285:HG3_Ill_Krunchall_16629:HG3_Ill_Spiral_12969:HG3_Ill_svaba_15707:HG4_Ill_250bpfermikitraw_16474:HG4_Ill_Cortex_623:HG4_Ill_GATKHCSBGrefine_8632:HG4_Ill_GATKHC_19977:HG4_Ill_Krunchall_17238:HG4_Ill_manta_2957:HG4_Ill_svaba_15614;NumExactMatchSVs=22;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.310078;PBcalls=16;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=65;DistBack=-1;DistForward=73732;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=24;REFWIDENED=11:78516303-78516326;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=955.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:0:22:0:27:1/1:1:26:1:20:1/1:0:38:./.:.:.:.:.:.
chr11	78590053	HG2_PB_SVrefine2PB10Xhap12_9007	T	TCCCATCTGGGATGTGAGGAGCGTCTCTGCCTGGCTGCCCCATCTAGGAAGTGAGGAGTGCCTCTGCCCGGCTGCCCCAAATGGGAAGTGAGGTGTGCCTCTGCCTGGCCACCCCATCTGGGAAGTGAGGAGCACCTCTGCCCGGCCACCCCGTCTGGGATGTGAGGAGCGCCTCTGCCCAGCCGCCACCCCGTCTAGGAAGTGAGAAGCGCCTCTGCCCGGTCGCCCCGTCTGGGAGGTGAGGAGCGCCTCTGCCTGGCAGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCCCAGCCGCCACCCGATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGCCCCGTCTGAGAGGTGAGGAGCGCCTCTGCCCGGCAGCCGCCCCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGCCCCGACTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGCCCCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGCCCCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGCCCCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGCCCCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGCCCCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGCCCCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGCCCCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2031:HG3_PB_HySA_18821:HG2_PB_HySA_22690:HG2_PB_pbsv_12507:HG3_PB_HySA_18820:HG4_PB_pbsv_12492:HG3_PB_pbsv_12198:HG2_PB_PB10Xdip_6252:HG2_PB_PB10Xdip_6251:HG2_PB_HySA_22689:HG3_PB_SVrefine2Falcon1Dovetail_7605:HG2_PB_SVrefine2PBcRplusDovetail_1935:HG2_PB_SVrefine2PB10Xhap12_9007:HG2_PB_SVrefine2Falcon2Bionano_6099:HG4_PB_SVrefine2PBcRDovetail_6304:HG4_PB_SVrefine2Falcon1Dovetail_7634:HG3_PB_SVrefine2PBcRDovetail_5869;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6099:HG2_PB_SVrefine2PB10Xhap12_9007:HG2_PB_SVrefine2PBcRplusDovetail_1935;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0718728;ClusterMaxSizeDiff=0.0704907;ClusterMaxEditDist=0.227456;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=715;DistBack=73732;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=916;REFWIDENED=11:78590054-78590969;PctSeqSimilarity=0.9702;PctSizeSimilarity=0.9958;PctRecOverlap=0.5664;SizeDiff=3;StartDistance=-309;EndDistance=-309;GTMatch=0;TruScore=84;MatchId=956.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:1:43:4:16:./.:0:0:0:0:./.:0:2:./.:3:29:.:.:.
chr11	79191613	HG2_PB_SVrefine2Falcon2Bionano_6101	T	TTAAAGGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6101:HG2_PB_pbsv_12509:HG3_PB_pbsv_12200:HG2_PB_HySA_22698;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6101;NumExactMatchSVs=1;ClusterMaxShiftDist=0.106918;ClusterMaxSizeDiff=0.100629;ClusterMaxEditDist=0.160606;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=325;DistBack=39;DistForward=1198;DistMin=39;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:79191614-79191627;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9909;PctRecOverlap=0.9514;SizeDiff=-3;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=97;MatchId=957.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:36:./.:14:22:22:10:./.:28:0:0:4:0/1:22:4:0/1:5:30:.:.:.
chr11	79210741	HG2_Ill_GATKHCSBGrefine_8388	C	CGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGTTGCCCAGTCTGGGATGTGAGGAGCGTCTCTACCCGGCCGCCACCCCGTCTAGGAAGTGAGGAGT	20	PASS	ClusterIDs=HG2_PB_HySA_22700:HG2_PB_pbsv_12511:HG4_Ill_GATKHC_19988:HG4_PB_pbsv_12495:HG4_Ill_GATKHCSBGrefine_8636:HG2_Ill_GATKHC_19995:HG2_Ill_GATKHCSBGrefine_8388;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8388:HG2_Ill_GATKHC_19995:HG4_Ill_GATKHCSBGrefine_8636:HG4_Ill_GATKHC_19988;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0600858;ClusterMaxSizeDiff=0.0429185;ClusterMaxEditDist=0.223176;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=116;DistBack=2953;DistForward=88718;DistMin=2953;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=432;REFWIDENED=11:79210704-79211135;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=958.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:./.:21:9:3:15:./.:2:9:16:0:./.:14:1:./.:.:.:.:.:.
chr11	81283867	HG2_PB_PB10Xdip_6265	A	AATATTTCAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_22710:HG2_PB_pbsv_12516:HG3_PB_pbsv_12206:HG2_PB_HySA_22711:HG3_PB_HySA_18843:HG4_PB_assemblyticsfalcon_4485:HG2_Ill_breakscan11_4307:HG2_PB_SVrefine2Falcon1plusDovetail_2034:HG2_PB_SVrefine2PBcRplusDovetail_1939:HG2_PB_SVrefine2PB10Xhap12_9013:HG2_PB_PB10Xdip_6264:HG2_PB_PB10Xdip_6265:HG4_PB_SVrefine2Falcon1Dovetail_7640;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_6265;NumExactMatchSVs=1;ClusterMaxShiftDist=0.203593;ClusterMaxSizeDiff=0.197605;ClusterMaxEditDist=0.230539;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=344;DistBack=25658;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=11:81283868-81283884;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9857;PctRecOverlap=0.9885;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=959.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:52:./.:21:16:6:28:./.:25:0:1:11:0/1:33:7:0/1:8:48:.:.:.
chr11	81473021	HG3_Ill_GATKHCSBGrefine_8293	A	ATATATATATATATACACACATATATATGTGTGTATATATATATATACACATATATATGTGTGTATATATATATACATATATATGTGTATATATATATATACATATATATGTGTATATATGTATACATATATACATATATATGTATATATATACATATATACACATATATATGTATATATG	20	PASS	ClusterIDs=HG4_PB_pbsv_12499:HG4_PB_assemblyticsfalcon_4486:HG2_PB_pbsv_12517:HG2_Ill_breakscan11_4308:HG4_Ill_MetaSV_863:HG2_Ill_MetaSV_829:HG2_Ill_GATKHCSBGrefine_8390:HG3_Ill_Spiral_12988:HG3_PB_pbsv_12207:HG3_Ill_MetaSV_914:HG2_PB_PB10Xdip_6266:HG2_PB_PB10Xdip_6267:HG2_PB_SVrefine2PB10Xhap12_9015:HG3_Ill_GATKHCSBGrefine_8293:HG4_PB_SVrefine2Falcon1Dovetail_7641:HG2_Ill_SpiralSDKrefine_2902:HG4_Ill_GATKHCSBGrefine_8637:HG2_PB_HySA_22713:HG4_PB_SVrefine2PBcRDovetail_6307:HG2_PB_SVrefine2Falcon1plusDovetail_2035:HG2_10X_SVrefine210Xhap12_8748:HG3_Ill_SVrefine2DISCOVARDovetail_9108:HG4_Ill_SVrefine2DISCOVARDovetail_8875:HG2_PB_SVrefine2PB10Xhap12_9014;NumClusterSVs=24;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_8293:HG3_Ill_MetaSV_914:HG3_Ill_Spiral_12988;NumExactMatchSVs=3;ClusterMaxShiftDist=0.352304;ClusterMaxSizeDiff=0.352304;ClusterMaxEditDist=0.368564;PBcalls=12;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=180;DistBack=1;DistForward=6;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=11:81473005-81473039;PctSeqSimilarity=0.9352;PctSizeSimilarity=0.8824;PctRecOverlap=0.8829;SizeDiff=-24;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=960.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:51:0|1:41:2:4:50:1|0:0:10:27:0:0/1:25:15:./.:.:.:.:.:.
chr11	81872547	HG2_PB_SVrefine2Falcon2Bionano_6104	T	TAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGTTGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAACAAAAACCAATTAGAGATTCTGTTGATTGTTGAAATAAAGACAAAAACAAACAAACAAAAAACCTCAGTGAATTAGTTCCTCTAATGATAATATGCCCCTCAAATGTGTTCATTTATATATATATACACATATATATACATATATATATATATATGTATGTATATATGACAAATGTGTTCATTTGAGGAGCAGATTATCAAGCCAGAAGGTCAAGTTGAAGAATACTCCCAAATGTGATATAAAAGGGCAAATATATGGAAAGAAATATTAGATAATGTGAAAGATATATTCATCATTTCAATGCAGATAATAGAAATTCCAGGTGGATAGAATGGAAAGAATAGAGCCTGGCTCTTGAGTTCTTTATTGTGGGAGATTTGTCTATCACTGCAGCAATCCTGTACTGTCTTGATTACAAGAGCTTTAGAATAATTCTTGTTATCTGGTAAAGCAAGTATGCCCGCTTTGGTATTCTCTTTACATGAACGCTTTGATGATTTCATACAAATTTTAAAATTAGCTTGACAAATTCTAAAAAAACTTTTCAGAAATTTGATTGGAATTTCTTTGAATCTATAAAGCAATTTTGAGATAACTTATATCTTTATTATATTGAGTCTTCCAGTCTATAAACATGGTATATTGCTCCATTTACTTTCATTTTCTTTAAATGTATATCATTAAATTAAAAAAATTTTCTCATTAAAGGTTCTACACATTTGTTAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7609:HG4_PB_HySA_18181:HG2_PB_HySA_22718:HG2_PB_HySA_22717:HG2_PB_pbsv_12519:HG2_PB_HySA_22716:HG3_PB_HySA_18849:HG2_PB_PB10Xdip_6269:HG2_PB_PB10Xdip_6268:HG4_PB_pbsv_12501:HG3_PB_HySA_18848:HG2_PB_SVrefine2PBcRplusDovetail_1942:HG2_PB_SVrefine2PB10Xhap12_9017:HG2_PB_SVrefine2Falcon2Bionano_6104:HG3_PB_SVrefine2PBcRDovetail_5874:HG4_PB_SVrefine2PBcRDovetail_6309:HG2_PB_SVrefine2Falcon1plusDovetail_2037:HG4_PB_SVrefine2Falcon1Dovetail_7643;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6104:HG2_PB_SVrefine2PB10Xhap12_9017:HG2_PB_SVrefine2PBcRplusDovetail_1942;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0689061;ClusterMaxSizeDiff=0.0689061;ClusterMaxEditDist=0.190076;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1125;DistBack=18397;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=390;REFWIDENED=11:81872548-81872937;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9991;PctRecOverlap=0.9156;SizeDiff=1;StartDistance=-95;EndDistance=-95;GTMatch=0;TruScore=97;MatchId=961.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:0:21:0:17:./.:0:0:0:1:./.:0:1:./.:19:187:.:1073:.
chr11	81893219	HG4_Ill_GATKHCSBGrefine_8640	A	ATCTGGGAGGGAGGTGGGGGTCAGCCCCTGCCAGGCCAGCCGCCCTGTTCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_6270:HG3_PB_SVrefine2Falcon1Dovetail_7610:HG3_PB_assemblyticsfalcon_4598:HG2_PB_SVrefine2Falcon1plusDovetail_2038:HG2_PB_pbsv_12520:HG4_PB_SVrefine2PBcRDovetail_6310:HG2_PB_SVrefine2Falcon2Bionano_6105:HG2_PB_HySA_22719:HG4_PB_HySA_18182:HG4_PB_pbsv_12502:HG4_Ill_Krunchall_17263:HG3_PB_pbsv_12209:HG4_Ill_GATKHC_20004:HG4_Ill_GATKHCSBGrefine_8640:HG4_Ill_250bpfermikitraw_16498:HG4_Ill_150bpfermikitraw_15865:HG3_PB_SVrefine2PBcRDovetail_5875:HG3_Ill_Krunchall_16653:HG3_Ill_GATKHC_19867:HG3_Ill_GATKHCSBGrefine_8295:HG3_Ill_250bpfermikitraw_16195:HG3_Ill_150bpfermikitraw_15727:HG2_PB_SVrefine2PBcRplusDovetail_1943:HG2_PB_SVrefine2PB10Xhap12_9018:HG2_Ill_SVrefine2DISCOVARplusDovetail_2245:HG2_Ill_Krunchall_16976:HG2_Ill_GATKHC_20013:HG2_Ill_GATKHCSBGrefine_8392:HG2_Ill_150bpfermikitraw_15698:HG2_10X_SVrefine210Xhap12_8752:HG2_PB_PB10Xdip_6271;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8752:HG2_Ill_150bpfermikitraw_15698:HG2_Ill_GATKHCSBGrefine_8392:HG2_Ill_GATKHC_20013:HG2_Ill_Krunchall_16976:HG2_Ill_SVrefine2DISCOVARplusDovetail_2245:HG2_PB_SVrefine2PB10Xhap12_9018:HG2_PB_SVrefine2PBcRplusDovetail_1943:HG3_Ill_150bpfermikitraw_15727:HG3_Ill_250bpfermikitraw_16195:HG3_Ill_GATKHCSBGrefine_8295:HG3_Ill_GATKHC_19867:HG3_Ill_Krunchall_16653:HG3_PB_SVrefine2PBcRDovetail_5875:HG4_Ill_150bpfermikitraw_15865:HG4_Ill_250bpfermikitraw_16498:HG4_Ill_GATKHCSBGrefine_8640:HG4_Ill_GATKHC_20004:HG4_Ill_Krunchall_17263;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0748663;ClusterMaxSizeDiff=0.0638298;ClusterMaxEditDist=0.347368;PBcalls=15;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=93;DistBack=20282;DistForward=27;DistMin=27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=130;REFWIDENED=11:81893201-81893330;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=962.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:76:./.:0:2:0:0:./.:1:5:0:6:1/1:0:26:./.:.:.:.:.:.
chr11	81926162	HG2_PB_SVrefine2Falcon2Bionano_6106	A	AGTGACGGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAGTCTCGCTCTGTCGCCCAGCGGGACTGCGGACTGCAGTGGCCAATCTCGGCTCACTGAAGCTCGCTTCCGGTTCACGCCATTCTCCTGCTCAGCCCCGAGTAGCTGGATACAGGCCGCCACGCGGCTAATTTTTTTTGTATTTTTAGTAGACGGTTTCACTTGAGGATGTCTGATCTCCTACCTCATATCCACCGCTCGCCCCAAGTGCGGATTACAGCGTGAGCCACCGCGCCGGC	10	PASS	ClusterIDs=HG3_PB_HySA_18851:HG3_PB_pbsv_12210:HG2_PB_pbsv_12521:HG2_PB_HySA_22721:HG4_PB_assemblyticsfalcon_4491:HG3_PB_assemblyticsfalcon_4599:HG4_PB_SVrefine2Falcon1Dovetail_7644:HG2_PB_SVrefine2Falcon2Bionano_6106:HG3_PB_SVrefine2Falcon1Dovetail_7611:HG2_PB_SVrefine2Falcon1plusDovetail_2039:HG2_PB_HySA_22720;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6106;NumExactMatchSVs=1;ClusterMaxShiftDist=0.170807;ClusterMaxSizeDiff=0.167183;ClusterMaxEditDist=0.244582;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=295;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:81926163-81926176;PctSeqSimilarity=0.9236;PctSizeSimilarity=0.8576;PctRecOverlap=0.8551;SizeDiff=-49;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=87;MatchId=963.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:./.:17:22:8:9:0|1:25:0:0:5:0/1:33:8:./.:.:.:.:.:.
chr11	85821763	HG2_PB_SVrefine2PBcRplusDovetail_1949	A	AGTGAGGAGCCCCTCCGCCCGGCAGCCGCCCCGTCTGAGAAGTGAGGAGTCCCTCTGCCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCATCCGGGAGGGAGGTGGGGGCGGTCAGCCCCCCGCCCGGCTAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCTGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCGGCCAGCCACCCCGTCCGGGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6111:HG2_PB_SVrefine2Falcon1plusDovetail_2045:HG2_PB_PB10Xdip_6276:HG2_PB_pbsv_12527:HG3_PB_pbsv_12217:HG4_PB_SVrefine2Falcon1Dovetail_7650:HG2_PB_HySA_22751:HG3_PB_SVrefine2Falcon1Dovetail_7616:HG4_PB_SVrefine2PBcRDovetail_6317:HG4_PB_pbsv_12510:HG2_PB_SVrefine2PBcRplusDovetail_1949:HG2_PB_SVrefine2PB10Xhap12_9025;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9025:HG2_PB_SVrefine2PBcRplusDovetail_1949:HG4_PB_SVrefine2PBcRDovetail_6317;NumExactMatchSVs=3;ClusterMaxShiftDist=0.196193;ClusterMaxSizeDiff=0.196193;ClusterMaxEditDist=0.310395;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=349;DistBack=18154;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=346;REFWIDENED=11:85821764-85822109;PctSeqSimilarity=0.9692;PctSizeSimilarity=0.9776;PctRecOverlap=0.7059;SizeDiff=-8;StartDistance=-101;EndDistance=-101;GTMatch=0;TruScore=88;MatchId=964.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:2:24:1:23:./.:0:0:0:0:./.:0:4:0/1:2:11:.:.:.
chr11	85841901	HG3_Ill_GATKHC_19906	G	GTATGTGTATATATATATATATATGTGTATATATATATATATATGTATATATATATATATGTGTGTATATATATATATATATGTGTGTGTGTATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_12511:HG4_PB_SVrefine2PBcRDovetail_6318:HG4_Ill_SVrefine2DISCOVARDovetail_8892:HG2_PB_SVrefine2Falcon2Bionano_6112:HG2_PB_SVrefine2Falcon1plusDovetail_2046:HG2_PB_PB10Xdip_6277:HG4_Ill_GATKHC_20030:HG4_PB_HySA_18209:HG3_PB_HySA_18880:HG4_Ill_GATKHCSBGrefine_8652:HG3_Ill_manta_2845:HG3_Ill_GATKHC_19906:HG3_Ill_GATKHCSBGrefine_8313:HG3_Ill_150bpfermikitraw_15760:HG2_Ill_GATKHC_20043:HG2_Ill_GATKHCSBGrefine_8404:HG2_Ill_150bpfermikitraw_15725:HG2_PB_HySA_22756:HG3_Ill_Spiral_13021:HG3_PB_pbsv_12218:HG2_PB_pbsv_12528;NumClusterSVs=21;ExactMatchIDs=HG3_Ill_150bpfermikitraw_15760:HG3_Ill_GATKHCSBGrefine_8313:HG3_Ill_GATKHC_19906:HG3_Ill_manta_2845;NumExactMatchSVs=4;ClusterMaxShiftDist=0.28877;ClusterMaxSizeDiff=0.28877;ClusterMaxEditDist=0.299465;PBcalls=10;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=96;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=11:85841902-85841921;PctSeqSimilarity=0.9948;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=965.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:36:0|1:28:2:1:36:1|0:0:10:25:0:0/1:36:17:./.:.:.:.:.:.
chr11	85970265	HG2_Ill_GATKHCSBGrefine_8405	T	TAAAAATCAGAAGTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_12512:HG2_PB_pbsv_12529:HG3_PB_SVrefine2Falcon1Dovetail_7617:HG2_PB_HySA_22758:HG4_PB_SVrefine2Falcon1Dovetail_7651:HG2_Ill_breakscan11_4309:HG4_Ill_MetaSV_869:HG4_Ill_GATKHCSBGrefine_8653:HG2_PB_SVrefine2Falcon1plusDovetail_2047:HG2_Ill_MetaSV_832:HG2_Ill_GATKHCSBGrefine_8405:HG4_PB_HySA_18211;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8405:HG2_Ill_MetaSV_832:HG2_PB_SVrefine2Falcon1plusDovetail_2047:HG4_Ill_GATKHCSBGrefine_8653:HG4_Ill_MetaSV_869;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0493827;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.172989;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=319;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=11:85970266-85970281;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=966.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:1|0:2:28:35:2:1|0:0:5:22:0:0/1:31:12:0/1:8:26:.:.:.
chr11	85983100	HG2_10X_SVrefine210Xhap12_8762	T	TTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGTGCATGCTGGAGTGCAGTGGTGCAGTCTTAGCTCACTGCAGCCCCCACCTCCTGGGTTCAAGTGATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGCCCCACGCCCAGCTTGTATTCTTTAGTAGAGGTGGAGTTTCGCCATGTTGGCTAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCGCCTGCCTTGGCCTCCCAAATTGTTGGGATTACAGGCGTGAGCCACTGCCCGGCTAGTGAAACTTTTTAATGAGGTCCATTAACTTAATAGTTATAGGGCTGTTCAAATTAACTACTTCATTTTGGGTCATACTGGGTGAGCTCTAGTGGTTTGTGCTGTTTGAGGAATTGGTACATTCCATCTAAGGTAAAATCTATGTGTACAGAGCTGTTTGTAATATTCCCTCATTATCCTTTCAACATCTGCTAAGTCTATAGTGATAACCCATTTCTTTCTCTTTTTTTGAGACAGGGTATTACTCTGGCTGTGGTGCAACTGGCTGTGGTGCTCAGTGCAGCCTCGACTTCCCAAGCAATCTGCCCACCTCTGCCTCCCGAGTAGCTGGGACTATAGGCGTGGGCCACCATGCCTGGCTAATTAAAAAAATTTTTTTTGTAGAGATGGAGTCTTGCTTTGTTGCCAGGGCTGGTCTCATTTTAGAAATTGGCAGTTTCGTTTTTGAAATTGGCAGTTTAGGTCTTTTTTAGGGTCAGTCTTGCTAGAGGTTTGTGAATTTTATTGATCTTTTCAAAGAACTAGCTTTTTATTGTTTGTTTTCTGTTGTAAATGTTATTGATGTCTTCTCTTTTGTTTGCTGTTGGTTTATTTTTTTTTCTTTCTTTC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_870:HG2_PB_pbsv_12530:HG4_PB_pbsv_12513:HG3_PB_SVrefine2PBcRDovetail_5880:HG3_PB_pbsv_12219:HG2_PB_SVrefine2PB10Xhap12_9026:HG3_PB_SVrefine2Falcon1Dovetail_7618:HG2_PB_PB10Xdip_6279:HG2_PB_SVrefine2Falcon1plusDovetail_2048:HG2_PB_SVrefine2PBcRplusDovetail_1951:HG4_PB_SVrefine2Falcon1Dovetail_7652:HG3_PB_HySA_18882:HG3_Ill_MetaSV_919:HG2_Ill_SVrefine2DISCOVARplusDovetail_2267:HG2_Ill_MetaSV_833:HG2_10X_SVrefine210Xhap12_8762:HG2_Ill_GATKHCSBGrefine_8406:HG4_Ill_SVrefine2DISCOVARDovetail_8894:HG4_PB_HySA_18212:HG4_PB_SVrefine2PBcRDovetail_6319:HG3_Ill_SVrefine2DISCOVARDovetail_9127:HG2_PB_SVrefine2Falcon2Bionano_6113:HG2_PB_HySA_22759;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8762:HG2_Ill_MetaSV_833:HG2_Ill_SVrefine2DISCOVARplusDovetail_2267;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0490998;ClusterMaxSizeDiff=0.0490998;ClusterMaxEditDist=0.282051;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=900;DistBack=12820;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=288;REFWIDENED=11:85983101-85983388;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=967.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:0:15:1:19:./.:0:3:0:6:./.:0:7:./.:18:176:.:998:.
chr11	86865952	HG2_PB_SVrefine2Falcon1plusDovetail_2050	A	GTTTCATGAGTTGTTTTTTAATTTTGTTGATAGAGTCCTTTGATGCACTAAAGTTTTTAATTTTTGGTGAAATTGGGTTGTTTAGTTTTTGTTGTTGAGTAGTGGGAGTTCCTAATATACTCTGGATATTAACTCCTCATCAGATATGCAATTTGCAGGTGTTTTCTG	20	PASS	ClusterIDs=HG2_PB_pbsv_12533:HG2_PB_HySA_22773:HG4_PB_HySA_18220:HG4_PB_pbsv_12515:HG4_Ill_SVrefine2DISCOVARDovetail_8899:HG2_PB_SVrefine2Falcon2Bionano_6115:HG2_PB_SVrefine2Falcon1plusDovetail_2050:HG2_PB_SVrefine2PB10Xhap12_9028:HG4_Ill_MetaSV_871:HG2_PB_PB10Xdip_6282;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2050:HG2_PB_SVrefine2Falcon2Bionano_6115:HG4_Ill_SVrefine2DISCOVARDovetail_8899;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0643275;ClusterMaxSizeDiff=0.0584795;ClusterMaxEditDist=0.211429;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=167;DistBack=-1;DistForward=19;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=170;REFWIDENED=11:86865855-86866024;PctSeqSimilarity=0.9978;PctSizeSimilarity=1;PctRecOverlap=0.6168;SizeDiff=0;StartDistance=64;EndDistance=64;GTMatch=0;TruScore=87;MatchId=968.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:39:0|1:24:0:1:37:./.:3:26:14:0:0/1:28:18:./.:.:.:.:.:.
chr11	86979201	HG2_Ill_250bpfermikitraw_16688	C	CTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT	20	PASS	ClusterIDs=HG2_PB_pbsv_12535:HG3_Ill_250bpfermikitraw_16238:HG3_Ill_SVrefine2DISCOVARDovetail_9133:HG2_Ill_250bpfermikitraw_16688:HG4_PB_pbsv_12517:HG4_Ill_250bpfermikitraw_16538:HG3_PB_pbsv_12226;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16688:HG3_Ill_250bpfermikitraw_16238;NumExactMatchSVs=2;ClusterMaxShiftDist=0.146341;ClusterMaxSizeDiff=0.146341;ClusterMaxEditDist=0.227848;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=85;DistBack=14459;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=4;REFWIDENED=11:86979200-86979206;PctSeqSimilarity=0.9841;PctSizeSimilarity=0.9882;PctRecOverlap=0.8941;SizeDiff=1;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=95;MatchId=969.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:0|1:34:0:1:30:./.:24:0:1:13:0/1:21:7:./.:.:.:.:.:.
chr11	87100629	HG2_Ill_GATKHCSBGrefine_8409	A	AATATATATATATATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG3_PB_HySA_18896:HG4_Ill_FB_10780:HG2_Ill_GATKHC_20057:HG2_Ill_GATKHCSBGrefine_8409:HG2_PB_HySA_22777:HG2_PB_PB10Xdip_6283:HG3_Ill_GATKHCSBGrefine_8320;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8409:HG2_Ill_GATKHC_20057;NumExactMatchSVs=2;ClusterMaxShiftDist=0.357895;ClusterMaxSizeDiff=0.357895;ClusterMaxEditDist=0.357895;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=11:87100630-87100645;PctSeqSimilarity=0.9619;PctSizeSimilarity=0.9434;PctRecOverlap=0.9623;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=970.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:1:35:1:25:./.:0:2:0:4:./.:0:5:./.:.:.:.:.:.
chr11	87149862	HG4_PB_pbsv_12519	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGAACGGAGTTCTTCGCTCTGTGCCCAGGCTGGAGTGCAAGTGGCGCGATCTCGGCTACTGCACAGCTCCGTCTCCGGGTTCACGCCATTTCTCCTGCATCAGCCTCCGATGTAGCTGGGACTGACAGGCGCCCGCCACCACGCCGGCTAATTTTTTGTATTTTAGTAGAGACGGGGTTTTCATCACCGTGTTAGCCCAGGATGGTCTCGATTTTCCTGACCTCGTGATCCGCCCGCTCGGCTCCCAAAGTGCTGGGATTACACGTGAGCCAGCTGCGCCCGGCCTGTTTTC	20	PASS	ClusterIDs=HG2_PB_HySA_22778:HG2_PB_pbsv_12537:HG4_PB_pbsv_12519:HG4_PB_HySA_18223:HG4_PB_SVrefine2Falcon1Dovetail_7655:HG2_Ill_breakscan11_4310:HG2_PB_SVrefine2Falcon2Bionano_6116;NumClusterSVs=7;ExactMatchIDs=HG4_PB_pbsv_12519;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0532915;ClusterMaxSizeDiff=0.0438871;ClusterMaxEditDist=0.16;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=9;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=11:87149857-87149867;PctSeqSimilarity=0.9472;PctSizeSimilarity=0.9723;PctRecOverlap=0.9569;SizeDiff=9;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=95;MatchId=971.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:34:1:3:20:./.:1:5:19:0:0/1:34:9:0/1:8:12:.:.:.
chr11	87166483	HG2_PB_PB10Xdip_6284	TTGCCAG	GATCCTTCTTCGGCTCTCTTCTTTGGCTCCTGGGCCAGATGTGTATGTTTAGCTCCAGGAGGAAGTGTACTTGCTTCTGCGGGACACTCACACCACCAAGATCAGAATAAAAAGAAAACTGGCCATCCTCGTGGGTTCCAACTTAGTCTTGCTCTCCCCTGCTTTACATCCATCTTCCCTCCTTGACTTCCTCCTCTCAGGACTGCACAGGCCAGCATCAGATGTGATGATAATCAGCTCCCACAACTGTATAAGGTTAAATCCCTATAGCAAATCACTTTCTATATTTGCTGGGGTCTGTTTCTCTCACTAAGCCTCTACTGAAACGCTACCTACTCATCACTGTTGTTTAAATGAGATAAGGCTTGTACAGCGCATAGTTCAGGACCTGGTCTGGATTAAGTGATTGATAAACATCTCCATTACAATCCCAAAAGACAGACATTATTTGACTAACACAAATCTAAGTCCAGCACCTAACACAGAGCCTGGCACATAGCAGATGCTCACTCAATAAACTTGTTGAATATTTTTTATCACAAGAGAGAAACAGAACTATATGTGGCAATACATG	20	PASS	ClusterIDs=HG2_PB_pbsv_12538:HG4_PB_pbsv_12520:HG4_Ill_GATKHCSBGrefine_8656:HG3_Ill_GATKHCSBGrefine_8321:HG2_Ill_GATKHCSBGrefine_8410:HG2_PB_PB10Xdip_6284:HG2_Ill_SVrefine2DISCOVARplusDovetail_2272:HG2_PB_SVrefine2PBcRplusDovetail_1955:HG2_PB_SVrefine2PB10Xhap12_9029:HG2_PB_SVrefine2Falcon2Bionano_6117:HG2_10X_SVrefine210Xhap12_8765:HG2_PB_SVrefine2Falcon1plusDovetail_2051:HG3_Ill_Spiral_13031:HG4_Ill_Spiral_995:HG2_Ill_Spiral_859:HG4_PB_HySA_18224:HG3_PB_pbsv_12227:HG2_Ill_MetaSV_836:HG3_Ill_MetaSV_923:HG4_Ill_MetaSV_873;NumClusterSVs=20;ExactMatchIDs=HG2_PB_PB10Xdip_6284:HG2_PB_SVrefine2PB10Xhap12_9029;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0998217;ClusterMaxSizeDiff=0.0855615;ClusterMaxEditDist=0.171233;PBcalls=9;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=567;DistBack=-6;DistForward=8010;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:87166489-87166482;PctSeqSimilarity=0.9948;PctSizeSimilarity=0.9982;PctRecOverlap=0.9895;SizeDiff=1;StartDistance=-3;EndDistance=3;GTMatch=0;TruScore=99;MatchId=972.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:2:29:0:20:1/1:0:14:0:21:1/1:0:27:./.:5:73:.:1169:.
chr11	88189454	HG2_PB_PB10Xdip_6292	T	TCCCTTCCCCTCCCCTCCCTCTCTGTTCCCCCTCTCCTCCCCCTCCCTTCCCCCTCCCCCTCCCCCTCTCCTTCCCCTCCCCTCCTCTTCCCCTCCCTTCCCCCTCCCCCTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1958:HG4_PB_pbsv_12527:HG2_PB_SVrefine2Falcon2Bionano_6119:HG2_PB_PB10Xdip_6293:HG2_PB_PB10Xdip_6292:HG3_PB_HySA_18904:HG4_PB_SVrefine2PBcRDovetail_6326:HG3_PB_SVrefine2PBcRDovetail_5885:HG2_10X_SVrefine210Xhap12_8770:HG3_PB_SVrefine2Falcon1Dovetail_7625:HG4_PB_SVrefine2Falcon1Dovetail_7662:HG3_PB_pbsv_12231:HG2_PB_SVrefine2Falcon1plusDovetail_2054:HG4_PB_HySA_18235:HG2_PB_HySA_22785:HG2_PB_pbsv_12542;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_6292:HG2_PB_PB10Xdip_6293;NumExactMatchSVs=2;ClusterMaxShiftDist=0.253275;ClusterMaxSizeDiff=0.242424;ClusterMaxEditDist=0.34632;PBcalls=15;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=111;DistBack=-1;DistForward=18;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=70;REFWIDENED=11:88189407-88189476;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9911;PctRecOverlap=0.9823;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=973.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:55:1/1:0:31:5:30:./.:1:15:0:13:1/1:0:14:./.:.:.:.:.:.
chr11	88420739	HG3_Ill_SVrefine2DISCOVARDovetail_9139	A	ATTATATATATATTATATATATATAATATATATATTATATATATATTATATATATTATATATATATTATATATATTATATATATATATAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_15744:HG2_PB_pbsv_12543:HG4_PB_HySA_18238:HG3_Ill_GATKHC_19931:HG3_Ill_GATKHCSBGrefine_8322:HG2_Ill_GATKHCSBGrefine_8412:HG3_PB_SVrefine2PBcRDovetail_5886:HG4_Ill_GATKHC_20058:HG4_Ill_GATKHCSBGrefine_8660:HG3_Ill_Spiral_13038:HG3_Ill_SVrefine2DISCOVARDovetail_9139:HG4_PB_pbsv_12528:HG3_PB_pbsv_12232;NumClusterSVs=13;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_9139:HG3_Ill_Spiral_13038:HG4_Ill_GATKHCSBGrefine_8660:HG4_Ill_GATKHC_20058;NumExactMatchSVs=4;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.079096;ClusterMaxEditDist=0.19209;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=89;DistBack=-1;DistForward=7;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=11:88420722-88420747;PctSeqSimilarity=0.9888;PctSizeSimilarity=0.9775;PctRecOverlap=0.9775;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=974.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:26:1|0:4:18:23:3:./.:9:7:0:9:0/1:13:17:./.:.:.:.:.:.
chr11	88908938	HG2_PB_HySA_22802	T	TATGATGAAGACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTATCACCCCAGGCTGGAGTGCAGTGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_18256:HG2_PB_pbsv_12547:HG3_PB_pbsv_12235:HG3_PB_HySA_18916:HG4_PB_pbsv_12533:HG2_PB_HySA_22802:HG4_PB_assemblyticsfalcon_4544:HG2_PB_assemblyticsfalcon_4646:HG2_Ill_breakscan11_4311:HG4_Ill_SVrefine2DISCOVARDovetail_8907:HG4_PB_SVrefine2PBcRDovetail_6329:HG2_Ill_SVrefine2DISCOVARplusDovetail_2279:HG2_PB_SVrefine2Falcon1plusDovetail_2055;NumClusterSVs=13;ExactMatchIDs=HG2_PB_HySA_22802;NumExactMatchSVs=1;ClusterMaxShiftDist=0.155488;ClusterMaxSizeDiff=0.155488;ClusterMaxEditDist=0.195122;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=0;DistForward=26851;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:88908939-88908952;PctSeqSimilarity=0.9909;PctSizeSimilarity=1;PctRecOverlap=0.9969;SizeDiff=0;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=975.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:25:0|1:39:1:0:26:./.:4:5:26:0:0/1:35:8:0/1:11:10:.:.:.
chr11	90000500	HG2_Ill_manta_3495	T	TGTGCTGGTTTTCAGAGGGAATGCTTCCAGTTTTTGCCCATCCAGTATGATATTGACTTTGGGTTTGTTATAAATAGCTCTTATTATTTTGAGATACATTCCATCAATAACTAGTTTATTGAGAGTTTTTAGCATGAAGGGACGTTGAATTTTTGTCGACGGCTTTTTCTGCATCTATTGAAATAATC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4312:HG4_PB_pbsv_12539:HG2_PB_pbsv_12553:HG3_PB_pbsv_12243:HG4_PB_HySA_18276:HG3_PB_assemblyticsfalcon_4661:HG4_PB_SVrefine2PBcRDovetail_6333:HG4_PB_SVrefine2Falcon1Dovetail_7666:HG4_Ill_manta_2964:HG4_Ill_SVrefine2DISCOVARDovetail_8912:HG4_Ill_MetaSV_879:HG4_Ill_GATKHCSBGrefine_8663:HG3_PB_SVrefine2PBcRDovetail_5893:HG3_PB_SVrefine2Falcon1Dovetail_7627:HG3_Ill_manta_2852:HG3_Ill_Spiral_13051:HG3_Ill_SVrefine2DISCOVARDovetail_9145:HG3_Ill_MetaSV_927:HG3_Ill_GATKHCSBGrefine_8330:HG3_Ill_250bpfermikitraw_16261:HG3_Ill_150bpfermikitraw_15797:HG2_PB_SVrefine2PBcRplusDovetail_1961:HG2_PB_SVrefine2PB10Xhap12_9036:HG2_PB_SVrefine2Falcon2Bionano_6124:HG2_PB_SVrefine2Falcon1plusDovetail_2058:HG2_Ill_manta_3495:HG2_Ill_SVrefine2DISCOVARplusDovetail_2283:HG2_Ill_MetaSV_840:HG2_Ill_GATKHCSBGrefine_8417:HG2_10X_SVrefine210Xhap12_8776:HG2_PB_PB10Xdip_6333:HG2_PB_PB10Xdip_6332;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8776:HG2_Ill_GATKHCSBGrefine_8417:HG2_Ill_MetaSV_840:HG2_Ill_SVrefine2DISCOVARplusDovetail_2283:HG2_Ill_manta_3495:HG2_PB_SVrefine2Falcon1plusDovetail_2058:HG2_PB_SVrefine2Falcon2Bionano_6124:HG2_PB_SVrefine2PB10Xhap12_9036:HG2_PB_SVrefine2PBcRplusDovetail_1961:HG3_Ill_150bpfermikitraw_15797:HG3_Ill_250bpfermikitraw_16261:HG3_Ill_GATKHCSBGrefine_8330:HG3_Ill_MetaSV_927:HG3_Ill_SVrefine2DISCOVARDovetail_9145:HG3_Ill_Spiral_13051:HG3_Ill_manta_2852:HG3_PB_SVrefine2Falcon1Dovetail_7627:HG3_PB_SVrefine2PBcRDovetail_5893:HG4_Ill_GATKHCSBGrefine_8663:HG4_Ill_MetaSV_879:HG4_Ill_SVrefine2DISCOVARDovetail_8912:HG4_Ill_manta_2964:HG4_PB_SVrefine2Falcon1Dovetail_7666:HG4_PB_SVrefine2PBcRDovetail_6333;NumExactMatchSVs=24;ClusterMaxShiftDist=0.172973;ClusterMaxSizeDiff=0.172973;ClusterMaxEditDist=0.255435;PBcalls=15;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=187;DistBack=7771;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=11:90000501-90000513;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=976.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:1/1:0:22:0:23:1/1:1:10:0:15:1/1:0:37:./.:.:.:.:.:.
chr11	90761452	HG3_Ill_GATKHC_19961	T	TGCATATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4313:HG3_PB_pbsv_12246:HG2_PB_pbsv_12557:HG3_PB_HySA_18954:HG3_Ill_svaba_15791:HG3_Ill_GATKHC_19961:HG2_Ill_svaba_15627:HG2_Ill_SVrefine2DISCOVARplusDovetail_2289:HG2_Ill_GATKHC_20093:HG2_Ill_GATKHCSBGrefine_8420:HG3_CG_vcfBeta_6794:HG2_CG_vcfBeta_7136:HG2_PB_HySA_22827;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8420:HG2_Ill_GATKHC_20093:HG2_Ill_SVrefine2DISCOVARplusDovetail_2289:HG2_Ill_svaba_15627:HG3_Ill_GATKHC_19961:HG3_Ill_svaba_15791;NumExactMatchSVs=6;ClusterMaxShiftDist=0.277228;ClusterMaxSizeDiff=0.27451;ClusterMaxEditDist=0.29703;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=2;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=54;DistBack=1702;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=11:90761453-90761462;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=977.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:./.:13:17:12:2:0|1:23:0:0:20:0/1:16:10:./.:.:.:.:.:.
chr11	90777327	HG2_PB_SVrefine2PBcRplusDovetail_1967	A	AATTATATGTATGAGGAAACTCTTAAGATATAGATAATATATTATATATTATCTATATCTTAAGAGTTCTCTCTCTATATATAATATATATTATGATCTATATTATATGCATTTATATATTGTATTAATTATATATTAATTATTATATAATATATATTTATAATATATAATAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8782:HG2_PB_PB10Xdip_6337:HG2_PB_PB10Xdip_6336:HG3_PB_pbsv_12247:HG2_PB_pbsv_12558:HG3_Ill_manta_2853:HG4_Ill_manta_2965:HG4_Ill_MetaSV_882:HG4_Ill_GATKHCSBGrefine_8666:HG3_Ill_MetaSV_929:HG3_Ill_GATKHCSBGrefine_8333:HG2_Ill_manta_3497:HG2_Ill_MetaSV_842:HG2_Ill_GATKHCSBGrefine_8421:HG4_PB_SVrefine2Falcon1Dovetail_7670:HG4_PB_pbsv_12543:HG2_PB_SVrefine2Falcon1plusDovetail_2061:HG3_Ill_SVrefine2DISCOVARDovetail_9150:HG3_PB_SVrefine2Falcon1Dovetail_7631:HG4_PB_SVrefine2PBcRDovetail_6337:HG4_Ill_SVrefine2DISCOVARDovetail_8917:HG3_PB_SVrefine2PBcRDovetail_5897:HG2_PB_SVrefine2PBcRplusDovetail_1967:HG2_PB_SVrefine2PB10Xhap12_9042:HG2_PB_SVrefine2Falcon2Bionano_6127:HG2_Ill_SVrefine2DISCOVARplusDovetail_2290;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8782:HG4_PB_SVrefine2PBcRDovetail_6337:HG4_Ill_SVrefine2DISCOVARDovetail_8917:HG3_PB_SVrefine2PBcRDovetail_5897:HG2_PB_SVrefine2PBcRplusDovetail_1967:HG2_PB_SVrefine2PB10Xhap12_9042:HG2_PB_SVrefine2Falcon2Bionano_6127:HG2_Ill_SVrefine2DISCOVARplusDovetail_2290;NumExactMatchSVs=8;ClusterMaxShiftDist=0.102273;ClusterMaxSizeDiff=0.102273;ClusterMaxEditDist=0.250681;PBcalls=13;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=172;DistBack=15864;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=71;REFWIDENED=11:90777328-90777398;PctSeqSimilarity=0.9748;PctSizeSimilarity=0.9942;PctRecOverlap=0.6243;SizeDiff=-1;StartDistance=-65;EndDistance=-65;GTMatch=0;TruScore=86;MatchId=978.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:41:1/1:3:25:1:10:1/1:1:30:0:16:1/1:0:21:./.:.:.:.:.:.
chr11	91135198	HG2_PB_SVrefine2PBcRplusDovetail_1970	A	AAAACTATGAAAACCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGATATGCGCAAAGACTTCATGACTAAAACACTTCTGCTCAGCAAAAGAAACTATCATCAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTATCCACCTGACAAAGGCCAAGAGAAATTATATAAATATATTGTGACATACTGTATATATATACATCTATGTGTGTGTGTGTATATATATATAAATATATACATCTTTTTATATATAAATATATATATACACACACATATATACACACACATAGATGTATATATGTCTGTTTATGTATATATATGCGGTATGTCACTATATATGACATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7635:HG3_PB_pbsv_12252:HG4_PB_HySA_18295:HG2_PB_pbsv_12564:HG4_PB_HySA_18294:HG3_Ill_MetaSV_931:HG4_Ill_GATKHCSBGrefine_8674:HG3_Ill_GATKHCSBGrefine_8337:HG2_Ill_GATKHCSBGrefine_8426:HG2_PB_PB10Xdip_6359:HG2_PB_PB10Xdip_6358:HG4_PB_pbsv_12549:HG3_PB_HySA_18967:HG2_Ill_MetaSV_844:HG4_PB_HySA_18293:HG4_PB_SVrefine2Falcon1Dovetail_7675:HG2_PB_SVrefine2Falcon1plusDovetail_2065:HG2_10X_SVrefine210Xhap12_8784:HG4_PB_SVrefine2PBcRDovetail_6340:HG4_Ill_SVrefine2DISCOVARDovetail_8921:HG3_PB_SVrefine2PBcRDovetail_5900:HG2_PB_SVrefine2PBcRplusDovetail_1970:HG2_PB_SVrefine2PB10Xhap12_9046:HG2_PB_SVrefine2Falcon2Bionano_6130:HG3_Ill_SVrefine2DISCOVARDovetail_9155:HG2_Ill_SVrefine2DISCOVARplusDovetail_2297;NumClusterSVs=26;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6130:HG2_PB_SVrefine2PB10Xhap12_9046:HG2_PB_SVrefine2PBcRplusDovetail_1970:HG3_PB_SVrefine2PBcRDovetail_5900;NumExactMatchSVs=4;ClusterMaxShiftDist=0.102564;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.276596;PBcalls=17;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=394;DistBack=30268;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=255;REFWIDENED=11:91135199-91135453;PctSeqSimilarity=0.9857;PctSizeSimilarity=0.9704;PctRecOverlap=0.5995;SizeDiff=-12;StartDistance=-157;EndDistance=-157;GTMatch=0;TruScore=85;MatchId=979.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:0:28:1:16:1/1:0:9:0:11:1/1:0:30:1/1:2:48:.:.:.
chr11	91153577	HG2_PB_SVrefine2Falcon2Bionano_6131	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATACGGAGCCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCCGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCCCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCCGCCACCACGCCCAGCTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2066:HG3_PB_SVrefine2PBcRDovetail_5901:HG3_PB_SVrefine2Falcon1Dovetail_7636:HG4_PB_SVrefine2Falcon1Dovetail_7676:HG3_PB_HySA_18968:HG2_10X_SVrefine210Xhap12_8785:HG2_PB_pbsv_12565:HG4_PB_SVrefine2PBcRDovetail_6341:HG2_PB_SVrefine2PBcRplusDovetail_1971:HG2_PB_SVrefine2PB10Xhap12_9047:HG2_PB_SVrefine2Falcon2Bionano_6131:HG2_PB_HySA_22841:HG2_PB_PB10Xdip_6361:HG2_PB_PB10Xdip_6360:HG4_PB_pbsv_12550:HG3_PB_pbsv_12253:HG2_PB_HySA_22840;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6131:HG2_PB_SVrefine2PB10Xhap12_9047:HG2_PB_SVrefine2PBcRplusDovetail_1971;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0862534;ClusterMaxSizeDiff=0.0860215;ClusterMaxEditDist=0.178478;PBcalls=16;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=185;DistBack=-27;DistForward=0;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=27;REFWIDENED=11:91153578-91153604;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9946;PctRecOverlap=0.9893;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=980.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:1/1:0:28:1:27:1/1:0:7:0:7:./.:0:2:./.:.:.:.:.:.
chr11	92145898	HG2_Ill_150bpfermikitraw_15783	T	TATATACACATATATATATATATATATACACATATATATATATATACACACAC	20	PASS	ClusterIDs=HG4_PB_pbsv_12553:HG3_Ill_manta_2855:HG3_PB_HySA_18972:HG2_Ill_manta_3499:HG2_PB_PB10Xdip_6363:HG4_Ill_scalpel_11557:HG4_Ill_150bpfermikitraw_15952:HG3_Ill_scalpel_12051:HG3_Ill_150bpfermikitraw_15821:HG2_Ill_150bpfermikitraw_15784:HG2_Ill_scalpel_11854:HG2_PB_pbsv_12568:HG2_PB_HySA_22844:HG2_Ill_scalpel_11853:HG4_Ill_scalpel_11556:HG4_Ill_manta_2967:HG4_Ill_Krunchall_17365:HG4_Ill_150bpfermikitraw_15951:HG2_Ill_Krunchall_17060:HG2_Ill_150bpfermikitraw_15783;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15783:HG2_Ill_Krunchall_17060:HG4_Ill_150bpfermikitraw_15951:HG4_Ill_Krunchall_17365:HG4_Ill_manta_2967:HG4_Ill_scalpel_11556;NumExactMatchSVs=6;ClusterMaxShiftDist=0.234234;ClusterMaxSizeDiff=0.234234;ClusterMaxEditDist=0.346154;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=13;DistForward=19;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=11:92145869-92145934;PctSeqSimilarity=0.9636;PctSizeSimilarity=0.9286;PctRecOverlap=0.9298;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=982.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:1/1:6:21:2:26:./.:3:7:1:2:./.:2:18:./.:.:.:.:.:.
chr11	92608477	HG2_Ill_GATKHCSBGrefine_8429	T	TAAGATCCTAGACAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7679:HG4_PB_pbsv_12557:HG3_PB_HySA_18976:HG2_PB_pbsv_12570:HG3_PB_pbsv_12258:HG3_PB_assemblyticsfalcon_4695:HG3_PB_SVrefine2PBcRDovetail_5906:HG4_Ill_MetaSV_886:HG4_Ill_GATKHCSBGrefine_8678:HG3_Ill_MetaSV_934:HG3_Ill_GATKHCSBGrefine_8341:HG2_Ill_MetaSV_847:HG2_Ill_GATKHCSBGrefine_8429:HG2_PB_SVrefine2Falcon1plusDovetail_2070:HG3_PB_SVrefine2Falcon1Dovetail_7639;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8429:HG2_Ill_MetaSV_847:HG3_Ill_GATKHCSBGrefine_8341:HG3_Ill_MetaSV_934;NumExactMatchSVs=4;ClusterMaxShiftDist=0.146965;ClusterMaxSizeDiff=0.146965;ClusterMaxEditDist=0.188498;PBcalls=9;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=5;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:92608478-92608491;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=983.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:21:0|1:29:2:0:20:0|1:26:0:0:7:0/1:38:16:0/1:9:43:.:.:.
chr11	93354729	HG3_Ill_Spiral_13083	G	GTCACAAGAACAGCAAGGGTGATATCCACCCCCATGATCCAATCACCTCCCAC	20	PASS	ClusterIDs=HG2_PB_HySA_22858:HG2_PB_PB10Xdip_6372:HG2_PB_PB10Xdip_6371:HG2_Ill_breakscan11_4315:HG4_Ill_scalpel_11568:HG4_Ill_manta_2970:HG4_Ill_Krunchall_17376:HG4_Ill_GATKHC_20123:HG4_Ill_GATKHCSBGrefine_8683:HG4_Ill_FB_10829:HG4_Ill_250bpfermikitraw_16598:HG4_Ill_150bpfermikitraw_15961:HG3_PB_assemblyticsfalcon_4706:HG3_Ill_scalpel_12065:HG3_Ill_Spiral_13083:HG3_Ill_Krunchall_16757:HG3_Ill_GATKHC_20002:HG3_Ill_GATKHCSBGrefine_8346:HG3_Ill_FB_10842:HG3_Ill_250bpfermikitraw_16298:HG3_Ill_150bpfermikitraw_15834:HG2_PB_assemblyticsPBcR_4571:HG2_Ill_scalpel_11865:HG2_Ill_manta_3502:HG2_Ill_SpiralSDKrefine_2974:HG2_Ill_Krunchall_17073:HG2_Ill_GATKHC_20124:HG2_Ill_GATKHCSBGrefine_8433:HG2_Ill_FB_10831:HG2_Ill_250bpfermikitraw_16741:HG2_Ill_150bpfermikitraw_15793:HG3_PB_pbsv_12264:HG4_PB_pbsv_12562:HG2_PB_HySA_22859;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15793:HG2_Ill_250bpfermikitraw_16741:HG2_Ill_FB_10831:HG2_Ill_GATKHCSBGrefine_8433:HG2_Ill_GATKHC_20124:HG2_Ill_Krunchall_17073:HG2_Ill_SpiralSDKrefine_2974:HG2_Ill_manta_3502:HG2_Ill_scalpel_11865:HG2_PB_assemblyticsPBcR_4571:HG3_Ill_150bpfermikitraw_15834:HG3_Ill_250bpfermikitraw_16298:HG3_Ill_FB_10842:HG3_Ill_GATKHCSBGrefine_8346:HG3_Ill_GATKHC_20002:HG3_Ill_Krunchall_16757:HG3_Ill_Spiral_13083:HG3_Ill_scalpel_12065:HG3_PB_assemblyticsfalcon_4706:HG4_Ill_150bpfermikitraw_15961:HG4_Ill_250bpfermikitraw_16598:HG4_Ill_FB_10829:HG4_Ill_GATKHCSBGrefine_8683:HG4_Ill_GATKHC_20123:HG4_Ill_Krunchall_17376:HG4_Ill_manta_2970:HG4_Ill_scalpel_11568;NumExactMatchSVs=27;ClusterMaxShiftDist=0.127273;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.145455;PBcalls=8;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=11:93354728-93354730;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=984.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:2:35:0:20:1/1:0:37:0:36:1/1:0:62:./.:.:.:.:.:.
chr11	93871032	HG4_Ill_150bpfermikitraw_15970	C	CTATCTTGGTCTGTTTTCCCCCAGGATATATATATATATATATATATATATATATATATATATATGTACAGTAACTTTTAAAAAGTT	20	PASS	ClusterIDs=HG4_PB_pbsv_12566:HG4_Ill_manta_2972:HG4_Ill_GATKHC_20133:HG4_Ill_GATKHCSBGrefine_8687:HG4_Ill_250bpfermikitraw_16607:HG4_Ill_150bpfermikitraw_15970:HG4_PB_SVrefine2PBcRDovetail_6354:HG4_Ill_SVrefine2DISCOVARDovetail_8937:HG3_PB_assemblyticsfalcon_4716:HG3_PB_SVrefine2Falcon1Dovetail_7646:HG2_PB_PB10Xdip_6376:HG2_PB_PB10Xdip_6375:HG2_Ill_breakscan11_4316:HG3_PB_pbsv_12269:HG4_PB_HySA_18317:HG2_PB_pbsv_12579:HG2_PB_HySA_22872:HG4_PB_SVrefine2Falcon1Dovetail_7685:HG2_PB_SVrefine2PB10Xhap12_9058:HG2_Ill_manta_3504:HG2_Ill_GATKHCSBGrefine_8437:HG3_Ill_manta_2859:HG3_Ill_Spiral_13094:HG3_Ill_GATKHCSBGrefine_8350:HG2_PB_SVrefine2Falcon2Bionano_6142:HG2_PB_SVrefine2Falcon1plusDovetail_2076:HG3_Ill_MetaSV_942:HG2_PB_SVrefine2PBcRplusDovetail_1981:HG2_PB_assemblyticsPBcR_4582;NumClusterSVs=29;ExactMatchIDs=HG4_Ill_150bpfermikitraw_15970:HG4_Ill_250bpfermikitraw_16607:HG4_Ill_GATKHCSBGrefine_8687:HG4_Ill_GATKHC_20133:HG4_Ill_manta_2972;NumExactMatchSVs=5;ClusterMaxShiftDist=0.320388;ClusterMaxSizeDiff=0.31068;ClusterMaxEditDist=0.349515;PBcalls=16;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=-1;DistForward=30445;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=11:93871031-93871034;PctSeqSimilarity=0.8564;PctSizeSimilarity=0.7544;PctRecOverlap=0.7565;SizeDiff=-28;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=78;MatchId=986.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:./.:1:3:0:3:1/1:0:6:0:11:1/1:0:18:./.:.:.:.:.:.
chr11	94684369	HG2_PB_PB10Xdip_6377	A	GACTCCACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAAACCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCGATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTGAAACTTAGAGTATAATAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_4718:HG2_PB_PB10Xdip_6377:HG4_PB_SVrefine2Falcon1Dovetail_7686:HG3_PB_SVrefine2Falcon1Dovetail_7647:HG3_PB_SVrefine2PBcRDovetail_5915:HG2_PB_SVrefine2PBcRplusDovetail_1982:HG2_PB_SVrefine2Falcon1plusDovetail_2077:HG2_PB_SVrefine2PB10Xhap12_9059:HG4_PB_SVrefine2PBcRDovetail_6355:HG2_PB_HySA_22874:HG2_PB_pbsv_12581:HG4_PB_pbsv_12567;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_6377;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0481182;ClusterMaxSizeDiff=0.0481182;ClusterMaxEditDist=0.155911;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=4111;DistBack=0;DistForward=49956;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=11:94684368-94684368;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9966;SizeDiff=-13;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=987.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:64:0|1:25:0:0:44:./.:18:1:0:10:0/1:7:9:0/1:149:571:.:4344:.
chr11	94828593	HG3_Ill_scalpel_12075	A	AAAGCAGTCACTCACAATTTCTTCCTTACTGTGATGCACACAGCAAAACAGGGACCACACATGCTAT	20	PASS	ClusterIDs=HG2_PB_pbsv_12582:HG3_PB_HySA_18992:HG2_PB_HySA_22876:HG2_PB_PB10Xdip_6379:HG2_PB_PB10Xdip_6378:HG2_Ill_breakscan11_4317:HG4_Ill_svaba_15736:HG4_Ill_scalpel_11576:HG4_Ill_manta_2973:HG4_Ill_Krunchall_17394:HG4_Ill_GATKHC_20137:HG4_Ill_GATKHCSBGrefine_8688:HG4_Ill_Cortex_643:HG4_Ill_250bpfermikitraw_16612:HG4_Ill_150bpfermikitraw_15974:HG3_Ill_svaba_15830:HG3_Ill_scalpel_12075:HG3_Ill_manta_2860:HG3_Ill_Spiral_13096:HG3_Ill_Krunchall_16770:HG3_Ill_GATKHC_20012:HG3_Ill_GATKHCSBGrefine_8352:HG3_Ill_Cortex_682:HG3_Ill_250bpfermikitraw_16310:HG3_Ill_150bpfermikitraw_15847:HG2_PB_assemblyticsPBcR_4583:HG2_Ill_svaba_15662:HG2_Ill_scalpel_11876:HG2_Ill_manta_3505:HG2_Ill_Krunchall_17091:HG2_Ill_GATKHC_20137:HG2_Ill_GATKHCSBGrefine_8439:HG2_Ill_Cortex_1540:HG2_Ill_250bpfermikitraw_16755:HG2_Ill_150bpfermikitraw_15807:HG3_PB_assemblyticsfalcon_4719:HG4_PB_pbsv_12568;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15807:HG2_Ill_250bpfermikitraw_16755:HG2_Ill_Cortex_1540:HG2_Ill_GATKHCSBGrefine_8439:HG2_Ill_GATKHC_20137:HG2_Ill_Krunchall_17091:HG2_Ill_manta_3505:HG2_Ill_scalpel_11876:HG2_Ill_svaba_15662:HG2_PB_assemblyticsPBcR_4583:HG3_Ill_150bpfermikitraw_15847:HG3_Ill_250bpfermikitraw_16310:HG3_Ill_Cortex_682:HG3_Ill_GATKHCSBGrefine_8352:HG3_Ill_GATKHC_20012:HG3_Ill_Krunchall_16770:HG3_Ill_Spiral_13096:HG3_Ill_manta_2860:HG3_Ill_scalpel_12075:HG3_Ill_svaba_15830:HG4_Ill_150bpfermikitraw_15974:HG4_Ill_250bpfermikitraw_16612:HG4_Ill_Cortex_643:HG4_Ill_GATKHCSBGrefine_8688:HG4_Ill_GATKHC_20137:HG4_Ill_Krunchall_17394:HG4_Ill_manta_2973:HG4_Ill_scalpel_11576:HG4_Ill_svaba_15736;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0875912;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.18705;PBcalls=8;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=28;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=9;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=11:94828592-94828594;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=988.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:2:39:1:15:1/1:1:26:0:22:1/1:0:66:./.:.:.:.:.:.
chr11	95823119	HG2_PB_PB10Xdip_6392	GCCGTCAGCACCAG	TGCCTTGGTCTAGACTTACTAAGGTCAGGAATATGGTTTATAGTTGCTGATATCAGCAGTATGTCCGGAAACAGACCAGAGGATGTTGGAGGTGGCAGGGAGGCTCCCAGAAAAGGACTGATGGGGCACCAAAGATATATGTTTCTACGTGGTGGCTCGTGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGAGGGCGGATCACTAGCTCAGGAATTCTAGACCAGCATGGCCAACTTGGTGAAACCCCATCTCTACTAAAAATATAAAAATTAGCCAGGCTTGGTGATGCCCGCCTGTAATCCGAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAAGTGGAAGTTGCAGCGAGCCGAGATCAAGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAGATATATATTTCCTTTTGTAAATTGTTTATTTTGGCTAACTCCATAATGTTTACCCTCAGGAAGGCTAACAGTCACACAGATATGTATGTATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTATATAAAATTTCTTTAGCGTCTCTAAAGAATAGAGTTTAGGATATGTTTTTATCCCAAAGGACTTAATCTACTATGTAGATTATGTAAGTAGGGCTCAACATTAGAAGAATATTCTTTTTAAGAATTCCACAATGATCTAGGACTCCAGCAAATCCTACCTGTGAGCTGTAGATCCTAGTGGCTGAAAGTATAGGCTTCAAAGTAGATCATCAGAATCCTGCAGCTGCTACTCATTATCTGTGCGAACTTGGGAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_6392:HG4_PB_pbsv_12576:HG4_Ill_SVrefine2DISCOVARDovetail_8942:HG4_PB_SVrefine2PBcRDovetail_6359:HG2_10X_SVrefine210Xhap12_8800:HG4_PB_SVrefine2Falcon1Dovetail_7691:HG3_PB_assemblyticsfalcon_4727:HG3_PB_SVrefine2Falcon1Dovetail_7651:HG2_PB_SVrefine2Falcon1plusDovetail_2081:HG3_Ill_MetaSV_945:HG2_Ill_MetaSV_857:HG4_Ill_MetaSV_896:HG3_PB_pbsv_12278:HG4_PB_HySA_18322:HG2_PB_HySA_22886:HG2_PB_pbsv_12588:HG2_PB_SVrefine2PB10Xhap12_9065;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_6392:HG2_PB_SVrefine2PB10Xhap12_9065;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0920746;ClusterMaxSizeDiff=0.0897436;ClusterMaxEditDist=0.208263;PBcalls=12;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=812;DistBack=21516;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:95823133-95823118;PctSeqSimilarity=0.9798;PctSizeSimilarity=0.9598;PctRecOverlap=0.9752;SizeDiff=-34;StartDistance=-11;EndDistance=2;GTMatch=0;TruScore=97;MatchId=989.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:35:0|1:37:1:0:34:./.:14:16:41:0:0/1:49:7:0/1:25:85:.:.:.
chr11	96665925	HG3_PB_SVrefine2PBcRDovetail_5922	G	GTCAAGGTGCAAAATAAAATCTCTTCTAAGGAAGAACTATATGTCACAGTGGTACAGAACAAATCTGATTACATGGGTAGCAGAGGAGCCATTTCTGGAATAGTGTGGTAGAGTTAATACTTCTCAGAACTTTTTTTTTGCAGAGAAGAAAATATTTATTTTAAAACTTTATTTGGATATATGTAATATAAGTTGTAAAAATAGTAGTAAGTAAATCTTTATAAGTCACCATTCTAAGGTAATCCAGCATGAGACTTGCATACTGACAGAATAAAACAATCAGGAAATGAGGTAGAAAAAGGTCAGTGGAAGGAACAACTACTGTGAGTCTCATAGGTCCTGAGCAGGAACATTTTCATGAATCTGAGTAAACTAATCTGCAGTAAGAAGGAAGTAGTAGCTATCACTGGAACCAAATGCAGTCATTATAATTATATGTATAGTTCAGTTTAGGTTTTAGGTGATCAGTGAATTAAACATAGTTCATTCTATCAAGATGGATTCAATCATCCTCATTTATCTTTTTATGGTTGGTTTTATGTCACCCTTGGTTCTTTTCTT	20	PASS	ClusterIDs=HG4_Ill_Spiral_1000:HG3_PB_pbsv_12281:HG4_PB_pbsv_12581:HG3_PB_assemblyticsfalcon_4734:HG2_PB_assemblyticsPBcR_4593:HG2_PB_PB10Xdip_6395:HG4_PB_HySA_18328:HG2_PB_HySA_22892:HG2_PB_pbsv_12591:HG2_PB_SVrefine2PBcRplusDovetail_1988:HG2_PB_SVrefine2PB10Xhap12_9069:HG4_Ill_SVrefine2DISCOVARDovetail_8949:HG4_Ill_MetaSV_900:HG4_Ill_GATKHCSBGrefine_8698:HG3_PB_SVrefine2PBcRDovetail_5922:HG3_Ill_SVrefine2DISCOVARDovetail_9179:HG3_Ill_MetaSV_948:HG3_Ill_GATKHCSBGrefine_8360:HG2_PB_SVrefine2Falcon2Bionano_6150:HG2_PB_SVrefine2Falcon1plusDovetail_2085:HG2_Ill_MetaSV_859:HG2_Ill_GATKHCSBGrefine_8449:HG2_10X_SVrefine210Xhap12_8803:HG3_Ill_manta_2862:HG4_PB_SVrefine2Falcon1Dovetail_7695:HG3_PB_SVrefine2Falcon1Dovetail_7654:HG4_PB_SVrefine2PBcRDovetail_6364:HG4_Ill_Cortex_646:HG3_Ill_Cortex_685:HG2_Ill_Cortex_1548:HG3_Ill_Spiral_13103:HG2_Ill_Spiral_862;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8803:HG2_Ill_GATKHCSBGrefine_8449:HG2_Ill_MetaSV_859:HG2_PB_SVrefine2Falcon1plusDovetail_2085:HG2_PB_SVrefine2Falcon2Bionano_6150:HG3_Ill_GATKHCSBGrefine_8360:HG3_Ill_MetaSV_948:HG3_Ill_SVrefine2DISCOVARDovetail_9179:HG3_PB_SVrefine2PBcRDovetail_5922:HG4_Ill_GATKHCSBGrefine_8698:HG4_Ill_MetaSV_900:HG4_Ill_SVrefine2DISCOVARDovetail_8949;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0918728;ClusterMaxSizeDiff=0.0918728;ClusterMaxEditDist=0.20954;PBcalls=16;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=560;DistBack=40123;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=11:96665926-96665927;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=990.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:41:0|1:31:4:1:42:1|0:0:28:34:0:0/1:27:10:0/1:9:29:.:.:.
chr11	97704638	HG3_PB_SVrefine2Falcon1Dovetail_7656	T	TCTCCTCTCCTCCCCTCCCCTCCCCTCCCCTCCCCTCGCCTACCCTCTCCCATCCTCCATCCTCCCGTCCCCTCCCCTCCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_6398:HG2_PB_pbsv_12595:HG3_PB_HySA_19012:HG4_PB_pbsv_12587:HG2_PB_HySA_22899:HG4_PB_HySA_18331:HG3_PB_pbsv_12284:HG2_PB_SVrefine2Falcon1plusDovetail_2088:HG2_Ill_breakscan11_4319:HG4_PB_SVrefine2PBcRDovetail_6366:HG4_PB_SVrefine2Falcon1Dovetail_7697:HG4_Ill_SVrefine2DISCOVARDovetail_8953:HG4_Ill_GATKHCSBGrefine_8706:HG4_Ill_150bpfermikitraw_15991:HG3_PB_SVrefine2PBcRDovetail_5924:HG3_PB_SVrefine2Falcon1Dovetail_7656:HG3_Ill_SVrefine2DISCOVARDovetail_9187:HG3_Ill_GATKHC_20038:HG3_Ill_GATKHCSBGrefine_8363:HG3_Ill_250bpfermikitraw_16325:HG2_PB_SVrefine2PBcRplusDovetail_1990:HG2_PB_SVrefine2PB10Xhap12_9071:HG2_PB_SVrefine2Falcon2Bionano_6152:HG2_Ill_manta_3509:HG2_Ill_SpiralSDKrefine_3001:HG2_Ill_SVrefine2DISCOVARplusDovetail_2324:HG2_Ill_Krunchall_17116:HG2_Ill_GATKHC_20160:HG2_Ill_GATKHCSBGrefine_8454:HG2_Ill_250bpfermikitraw_16771:HG2_10X_SVrefine210Xhap12_8810:HG4_Ill_GATKHC_20164:HG2_PB_PB10Xdip_6399;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8810:HG2_Ill_250bpfermikitraw_16771:HG2_Ill_GATKHCSBGrefine_8454:HG2_Ill_GATKHC_20160:HG2_Ill_Krunchall_17116:HG2_Ill_SVrefine2DISCOVARplusDovetail_2324:HG2_Ill_SpiralSDKrefine_3001:HG2_Ill_manta_3509:HG2_PB_SVrefine2Falcon2Bionano_6152:HG2_PB_SVrefine2PB10Xhap12_9071:HG2_PB_SVrefine2PBcRplusDovetail_1990:HG3_Ill_250bpfermikitraw_16325:HG3_Ill_GATKHCSBGrefine_8363:HG3_Ill_GATKHC_20038:HG3_Ill_SVrefine2DISCOVARDovetail_9187:HG3_PB_SVrefine2Falcon1Dovetail_7656:HG3_PB_SVrefine2PBcRDovetail_5924:HG4_Ill_150bpfermikitraw_15991:HG4_Ill_GATKHCSBGrefine_8706:HG4_Ill_SVrefine2DISCOVARDovetail_8953:HG4_PB_SVrefine2Falcon1Dovetail_7697:HG4_PB_SVrefine2PBcRDovetail_6366;NumExactMatchSVs=22;ClusterMaxShiftDist=0.097561;ClusterMaxSizeDiff=0.0731707;ClusterMaxEditDist=0.25;PBcalls=16;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=80;DistBack=5293;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=11:97704639-97704649;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=991.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:1/1:1:31:0:29:1/1:0:8:0:17:1/1:0:27:./.:.:.:.:.:.
chr11	98196291	HG2_Ill_GATKHCSBGrefine_8456	C	CTTTCCTGACTTTTTTTTTTTTTTTAATTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGTACATTGTGCAGGTTAGTTACATATGTATACATGTGCCAT	20	PASS	ClusterIDs=HG3_PB_HySA_19017:HG2_PB_pbsv_12598:HG4_Ill_GATKHCSBGrefine_8707:HG3_PB_pbsv_12286:HG3_Ill_GATKHCSBGrefine_8365:HG2_Ill_GATKHCSBGrefine_8456:HG2_PB_SVrefine2Falcon2Bionano_6154:HG3_PB_SVrefine2PBcRDovetail_5926;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8456:HG3_Ill_GATKHCSBGrefine_8365:HG4_Ill_GATKHCSBGrefine_8707;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0648148;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.240741;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=108;DistBack=5213;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:98196292-98196305;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=992.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:0|1:29:2:1:22:./.:1:4:18:0:0/1:23:5:./.:.:.:.:.:.
chr11	98294163	HG2_Ill_GATKHC_20172	A	AGTCCCTGGACCCTGCTGATCAGAATAGTTGCACTCATCAACACAGCAGCAGATCCCCCTCTTGCCCAAGAACTTGCAATG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8815:HG2_PB_pbsv_12600:HG4_PB_pbsv_12592:HG2_PB_HySA_22906:HG3_PB_pbsv_12288:HG2_PB_PB10Xdip_6410:HG2_PB_PB10Xdip_6409:HG4_Ill_svaba_15759:HG4_Ill_GATKHC_20174:HG4_Ill_GATKHCSBGrefine_8709:HG4_Ill_250bpfermikitraw_16635:HG3_Ill_svaba_15847:HG3_Ill_scalpel_12093:HG3_Ill_GATKHC_20043:HG3_Ill_GATKHCSBGrefine_8367:HG3_Ill_250bpfermikitraw_16328:HG3_Ill_150bpfermikitraw_15867:HG2_Ill_svaba_15690:HG2_Ill_scalpel_11896:HG2_Ill_Krunchall_17127:HG2_Ill_GATKHC_20172:HG2_Ill_GATKHCSBGrefine_8457:HG2_Ill_250bpfermikitraw_16781:HG2_Ill_150bpfermikitraw_15835:HG4_PB_SVrefine2PBcRDovetail_6369:HG4_Ill_SVrefine2DISCOVARDovetail_8956:HG3_PB_SVrefine2PBcRDovetail_5928:HG3_Ill_SVrefine2DISCOVARDovetail_9190:HG2_PB_SVrefine2PBcRplusDovetail_1993:HG2_PB_SVrefine2PB10Xhap12_9074:HG2_Ill_SVrefine2DISCOVARplusDovetail_2328;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15835:HG2_Ill_250bpfermikitraw_16781:HG2_Ill_GATKHCSBGrefine_8457:HG2_Ill_GATKHC_20172:HG2_Ill_Krunchall_17127:HG2_Ill_scalpel_11896:HG2_Ill_svaba_15690:HG3_Ill_150bpfermikitraw_15867:HG3_Ill_250bpfermikitraw_16328:HG3_Ill_GATKHCSBGrefine_8367:HG3_Ill_GATKHC_20043:HG3_Ill_scalpel_12093:HG3_Ill_svaba_15847:HG4_Ill_250bpfermikitraw_16635:HG4_Ill_GATKHCSBGrefine_8709:HG4_Ill_GATKHC_20174:HG4_Ill_svaba_15759;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.282209;PBcalls=10;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=80;DistBack=0;DistForward=8126;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=232;REFWIDENED=11:98294063-98294294;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=993.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:1/1:0:29:1:28:./.:1:13:0:19:1/1:3:44:./.:.:.:.:.:.
chr11	98482043	HG3_Ill_150bpfermikitraw_15868	T	TAATATAAATATTCATATTACATATATTTATATTTTATATTTAGATTTAAATATAA	20	PASS	ClusterIDs=HG3_PB_pbsv_12289:HG2_PB_PB10Xdip_6411:HG3_Ill_Spiral_13112:HG2_PB_pbsv_12601:HG3_Ill_Krunchall_16792:HG3_Ill_GATKHC_20044:HG3_Ill_GATKHCSBGrefine_8368:HG3_Ill_250bpfermikitraw_16329:HG3_Ill_150bpfermikitraw_15868:HG2_Ill_SpiralSDKrefine_3010:HG2_Ill_Krunchall_17128:HG2_Ill_GATKHC_20173:HG2_Ill_GATKHCSBGrefine_8458:HG2_Ill_250bpfermikitraw_16782:HG2_Ill_150bpfermikitraw_15836;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15836:HG2_Ill_250bpfermikitraw_16782:HG2_Ill_GATKHCSBGrefine_8458:HG2_Ill_GATKHC_20173:HG2_Ill_Krunchall_17128:HG2_Ill_SpiralSDKrefine_3010:HG3_Ill_150bpfermikitraw_15868:HG3_Ill_250bpfermikitraw_16329:HG3_Ill_GATKHCSBGrefine_8368:HG3_Ill_GATKHC_20044:HG3_Ill_Krunchall_16792:HG3_Ill_Spiral_13112;NumExactMatchSVs=12;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.107143;ClusterMaxEditDist=0.293103;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=22;DistForward=24;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=225;REFWIDENED=11:98481977-98482201;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=994.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:32:0|1:17:3:0:31:./.:2:10:8:0:0/1:19:21:./.:.:.:.:.:.
chr11	98640836	HG4_Ill_GATKHCSBGrefine_8710	A	ACACCTCCCAGACGGGGTGGCTGCCGTGCAGAGGGGCTCCTCACCTCCCAGACAGGGCAGCCGGGCAGAGGCGCCCCCCACCTCCCGGATGGGGCAGCGGCTGGGCGGGGGTGCCCCCAACCTCCCCCCGGGACGGGGCGGCTGGCCGGGCAGGGGCTGCCCCCCACCTCCCTCCCGGAAGGGGCAGCTGGCCGGGCGGGGGCTGCCCCC	20	PASS	ClusterIDs=HG3_PB_pbsv_12290:HG4_PB_pbsv_12593:HG2_PB_pbsv_12602:HG2_PB_HySA_22907:HG4_PB_HySA_18338:HG3_PB_HySA_19018:HG4_PB_SVrefine2Falcon1Dovetail_7699:HG3_PB_SVrefine2PBcRDovetail_5929:HG2_PB_SVrefine2Falcon1plusDovetail_2091:HG2_Ill_MetaSV_864:HG3_Ill_SVrefine2DISCOVARDovetail_9192:HG3_Ill_MetaSV_952:HG3_Ill_GATKHCSBGrefine_8369:HG2_PB_SVrefine2Falcon2Bionano_6155:HG3_PB_SVrefine2Falcon1Dovetail_7659:HG2_PB_SVrefine2PB10Xhap12_9075:HG4_PB_SVrefine2PBcRDovetail_6370:HG4_Ill_SVrefine2DISCOVARDovetail_8957:HG4_Ill_GATKHCSBGrefine_8710:HG2_PB_SVrefine2PBcRplusDovetail_1994:HG2_Ill_SVrefine2DISCOVARplusDovetail_2332:HG2_Ill_GATKHCSBGrefine_8459:HG4_Ill_MetaSV_908:HG2_10X_SVrefine210Xhap12_8816:HG2_PB_PB10Xdip_6412:HG2_PB_PB10Xdip_6413;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8459:HG2_Ill_SVrefine2DISCOVARplusDovetail_2332:HG2_PB_SVrefine2PBcRplusDovetail_1994:HG4_Ill_GATKHCSBGrefine_8710:HG4_Ill_SVrefine2DISCOVARDovetail_8957:HG4_PB_SVrefine2PBcRDovetail_6370;NumExactMatchSVs=6;ClusterMaxShiftDist=0.076555;ClusterMaxSizeDiff=0.0574163;ClusterMaxEditDist=0.211765;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=209;DistBack=61590;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=96;REFWIDENED=11:98640837-98640932;PctSeqSimilarity=0.9952;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=995.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:24:2:30:./.:2:4:1:8:1/1:0:17:./.:.:.:.:.:.
chr11	98774694	HG2_PB_pbsv_12603	T	TGTGATTGGGGCCTTGCCGGTGGCTCACGCTGTAATCCAGCACTCTTGGGAGGCCGAGCGCGGGCGGATCACGAGGTCAGGAAGATCGAGACCATCCCTGGCTTAACACGGTGAAAAACCCCCGTTCTCTACAAAAATACAAAAATTTAGAACCCGGGCGTGGTAGCGGGCGCTGTAGTCCCAGCTACTCGTGTGAGGCTGAGCAGCGGAGAAATTGGCGTGAACCCGGGAGGCGGACTTGAGTGTGAGCGAGATCGCGCCACTGCACCTCGAGCCTGGGGACAGAGCCGAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAATAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_HySA_18340:HG2_PB_pbsv_12603:HG4_PB_SVrefine2PBcRDovetail_6371:HG2_PB_SVrefine2Falcon1plusDovetail_2092;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_12603;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0620155;ClusterMaxSizeDiff=0.0589147;ClusterMaxEditDist=0.130898;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=331;DistBack=0;DistForward=7;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=11:98774690-98774702;PctSeqSimilarity=0.9426;PctSizeSimilarity=0.9637;PctRecOverlap=0.9637;SizeDiff=12;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=95;MatchId=996.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:51:0|1:46:2:2:46:0|1:25:0:0:6:0/1:15:10:0/1:5:16:.:.:.
chr11	98848035	HG2_Ill_GATKHCSBGrefine_8460	A	ATCATATGTCTATTAAAAATAAAACTGATATTTAACAATCCAGTATATTGTTATTGAGCTGTACAATAACACATTAGTGAAGTTTTCAAGCTGCACATTTCTTTCTTTTATCATTTTTCAATACTTCTTGTGATTATTGGAGATCAGTAGATTCTTATCCTCATTTAAGAATTAAAATACTATGGAACCATAAAGGAGCCCATATAGCCAAGACACTCCTAAGCAAAAAGAACAAAGCTGGAGGCATAACAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7700:HG2_PB_pbsv_12604:HG2_Ill_breakscan11_4320:HG3_PB_SVrefine2Falcon1Dovetail_7660:HG4_Ill_GATKHCSBGrefine_8711:HG3_Ill_GATKHCSBGrefine_8370:HG2_Ill_GATKHCSBGrefine_8460:HG4_Ill_MetaSV_911:HG2_Ill_MetaSV_866:HG2_PB_HySA_22910:HG2_PB_SVrefine2PBcRplusDovetail_1995:HG2_PB_SVrefine2Falcon2Bionano_6156:HG4_Ill_SVrefine2DISCOVARDovetail_8960:HG2_Ill_SVrefine2DISCOVARplusDovetail_2334;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8460:HG3_Ill_GATKHCSBGrefine_8370:HG4_Ill_GATKHCSBGrefine_8711;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0856031;ClusterMaxSizeDiff=0.0856031;ClusterMaxEditDist=0.14786;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=251;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=11:98848036-98848036;PctSeqSimilarity=0.9863;PctSizeSimilarity=0.9805;PctRecOverlap=0.9767;SizeDiff=-5;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=98;MatchId=997.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:39:./.:4:9:10:10:0|1:29:0:0:60:0/1:26:26:./.:.:.:.:.:.
chr11	99432454	HG4_Ill_GATKHC_20181	C	CCGGTCTAATCATTAGAGAAATATGAAGAGATATTTTCTAAGGGATATTTATTAAAAGAAAAGAAGCCTTGACTAGTACTCCT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_15840:HG4_PB_pbsv_12600:HG3_PB_pbsv_12294:HG2_PB_pbsv_12608:HG2_PB_PB10Xdip_6418:HG2_PB_PB10Xdip_6417:HG2_Ill_breakscan11_4321:HG4_Ill_manta_2981:HG4_Ill_Krunchall_17442:HG4_Ill_GATKHC_20181:HG4_Ill_GATKHCSBGrefine_8726:HG4_Ill_Cortex_650:HG4_Ill_250bpfermikitraw_16643:HG4_Ill_150bpfermikitraw_16006:HG3_Ill_manta_2866:HG3_Ill_Spiral_13115:HG3_Ill_Krunchall_16799:HG3_Ill_GATKHC_20051:HG3_Ill_GATKHCSBGrefine_8373:HG3_Ill_Cortex_688:HG3_Ill_250bpfermikitraw_16335:HG3_Ill_150bpfermikitraw_15874:HG2_PB_assemblyticsfalcon_4747:HG2_Ill_manta_3512:HG2_Ill_SpiralSDKrefine_3014:HG2_Ill_Krunchall_17138:HG2_Ill_GATKHC_20178:HG2_Ill_GATKHCSBGrefine_8474:HG2_Ill_Cortex_1566:HG2_Ill_250bpfermikitraw_16787;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15840:HG4_Ill_manta_2981:HG4_Ill_Krunchall_17442:HG4_Ill_GATKHC_20181:HG4_Ill_GATKHCSBGrefine_8726:HG4_Ill_Cortex_650:HG4_Ill_250bpfermikitraw_16643:HG4_Ill_150bpfermikitraw_16006:HG3_Ill_manta_2866:HG3_Ill_Spiral_13115:HG3_Ill_Krunchall_16799:HG3_Ill_GATKHC_20051:HG3_Ill_GATKHCSBGrefine_8373:HG3_Ill_Cortex_688:HG3_Ill_250bpfermikitraw_16335:HG3_Ill_150bpfermikitraw_15874:HG2_PB_assemblyticsfalcon_4747:HG2_Ill_manta_3512:HG2_Ill_SpiralSDKrefine_3014:HG2_Ill_Krunchall_17138:HG2_Ill_GATKHC_20178:HG2_Ill_GATKHCSBGrefine_8474:HG2_Ill_Cortex_1566:HG2_Ill_250bpfermikitraw_16787;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0591716;ClusterMaxEditDist=0.128655;PBcalls=6;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=82;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=11:99432453-99432456;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=998.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:1:29:0:14:1/1:0:34:1:30:1/1:0:64:./.:.:.:.:.:.
chr11	99685968	HG2_PB_SVrefine2Falcon2Bionano_6158	T	TCTGCATTTGTTAATTTAATTTAGTCTCACAAAGTTGAGCGTTAGATAAAGTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8822:HG4_PB_pbsv_12602:HG2_PB_HySA_22915:HG2_PB_pbsv_12609:HG4_PB_SVrefine2Falcon1Dovetail_7705:HG4_Ill_svaba_15766:HG4_Ill_SVrefine2DISCOVARDovetail_8967:HG4_Ill_Krunchall_17446:HG4_Ill_GATKHC_20187:HG4_Ill_GATKHCSBGrefine_8727:HG4_Ill_250bpfermikitraw_16647:HG4_Ill_150bpfermikitraw_16010:HG2_PB_SVrefine2Falcon2Bionano_6158:HG2_Ill_svaba_15694:HG2_Ill_manta_3513:HG2_Ill_SVrefine2DISCOVARplusDovetail_2339:HG2_Ill_Krunchall_17140:HG2_Ill_GATKHC_20181:HG2_Ill_GATKHCSBGrefine_8475:HG2_Ill_250bpfermikitraw_16789:HG2_Ill_150bpfermikitraw_15842;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8822:HG4_PB_SVrefine2Falcon1Dovetail_7705:HG4_Ill_svaba_15766:HG4_Ill_SVrefine2DISCOVARDovetail_8967:HG4_Ill_Krunchall_17446:HG4_Ill_GATKHC_20187:HG4_Ill_GATKHCSBGrefine_8727:HG4_Ill_250bpfermikitraw_16647:HG4_Ill_150bpfermikitraw_16010:HG2_PB_SVrefine2Falcon2Bionano_6158:HG2_Ill_svaba_15694:HG2_Ill_manta_3513:HG2_Ill_SVrefine2DISCOVARplusDovetail_2339:HG2_Ill_Krunchall_17140:HG2_Ill_GATKHC_20181:HG2_Ill_GATKHCSBGrefine_8475:HG2_Ill_250bpfermikitraw_16789:HG2_Ill_150bpfermikitraw_15842;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.214286;PBcalls=5;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=52;DistBack=2215;DistForward=52;DistMin=52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=54;REFWIDENED=11:99685969-99686022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=999.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:31:./.:3:6:5:8:0|1:11:0:1:15:0/1:14:23:./.:.:.:.:2805:.
chr11	99690013	HG3_PB_SVrefine2Falcon1Dovetail_7664	T	TCCCTCTCCTCTCCTCCCCTTCCCCTCTTCTCCCCTCCCTCCCCTCTCTTGTCCCCTCTCTCTCTCCTCCCTCCCCTCTCCCTCCTCCCCTCCTCCCCCCCCTCCCTCTCCTCCCCTCTCCTCCCCTCTCCTCCCTCCCTCTCCCTCCCCTCCTCTCTCCTCTCCTCCCCTGTTCTCCCTCCCCTCCCCTCTCCCTCCTCCTCTCCTCCCTGTTCTCCCTCCCCTCTCCTCCCCTGTTCTCCCCCCTCCCCTCCCCTCCCCCTCCTCTCCTCCCTCCCCTCCCCCTCCTCCTCCCCTGTCCCTCCCCCTCCTCCCTCCTCCCTCCTCTCCCTCTTGTCCCCTCCCCTTCTCCCCTCCCTCCCTCTCCCTCTTGTCCCCTCCCCCTCTCCCTCTCTCCCCTCCCCTCCCTCCCCTCCTCTCTTCTCCCCTCCTCCCTCCTCCCCTCTCCTCCCCTTCCTCTCCCTCCCCTCCCTCCCCTCCTCCTCCCTCCTCCCTCCCCTCTTCCCTCCCTCCCCTCTTCTCCCCTCCCCCCGTCCCTCCTCTCTCTCCCTCCCTCCCCTCTTCTCCCCTCCCCTCCCGTCCCCTCCTCTCTCTCCTCCTCCCCTCCCTCCCCTCCTCTCCCTCCCCTCCCTCTCTCCCCTCTCCTCCCCTCTCTCCTCTCCTCTCCTCTCCCCTCTCTCCTCTCACTCCTCCCTCTCCTCTCTCCCCCTCCTCCCTCCCTCCCCTCTCCCTCCCCTCCCCTCCCTCCCCTCCCCTCTTCCCCTCCCCTCTCCTCCTCCCCCCCTCCCTCCTCCCTCCCTCCTCCTCCCTCCCCTCCTCCCTCCCTCCCTCCCTCCCCTCTCCTCCCTCCCCTCCCCTCTCCTCCCTCCCTCCCTCTCCTCCCTCTCTCCCTCCCTCTCTCCTCTCCTCCCCTCCCTCTCTTCCCCTGTCTCCCCCCTCTCCTCCCCTCTCCCCCTCTCCTCCCCTCCTCCTTTCCTCAATATTATAGCTAGTAGAATTTCAGAAAATATTAAAAAATAATAAAAGTAACATTTTTCACACTCTCACTGTAATCTGAATTTGCTTGCAGCTCCAAAGAAGGTTTTTAGTAATGTCTTCAAAGAAACAATCTTTATAAGAAAAAAATAAACTAGTTTCCTCAAAATTCAGATTTTATTATATTTTTTCTCTTACAGAGTATTCAAAAGCTCTTCCTGGTCTCTCCACTTCATATGCTGCTTTGTTAAGAATTAAGAAAGTTCATCTTCATCTCTTTTTGGTTCCAAAACCAGACCAGATACAGCAGCCCTTCATTAGGAACACTGAGTGCTTCTTCACCCAGCTGGCGAGGGGCAGCTCAGAATTATTATCCCCCATCAATCTTTATCATTCCTCAGATGCCAACTGAGGAACCAGGCATTATTTTGTCGATAGATCCAAAATTGACAAAGGTAGACAACATCTAGAAAAGTTTATTCAAAACTATAAAGCCAATAGCTGTAGAGCAGTCTTTAATTTAACTGATATCTTAGTGTTGGATATATAGATTTTTCTTATTTTCCATTCATAAGTAATGCTAAGTATATACTTATCTTTGCGTGCCTCTTTAATTATTTTCTTACACAGAATACACTTCCAGAAATAAAACCACTGGATTGAAGGATAGGTCTGTTTTATGTTTCCGATATTCACTGTCAAATTGGCCTTCAAAAATGTTATTTTACTTTCATTCTACGAGAGTATTTAGTCTTAATCCTAAATTATAATTGGTATAGTAGAGTGCAATTCGAATAGAGTGCTCTCTCCCTCCCTCCCTCTCCCTCCCCTCCCTCTCCTCTCTCCCCTCTCCCTCCCCTCCCCCTCCTCCCTGTTCTCCCTCCTCTCCCTCTCCCTCCCCTCCCTCTCCTCTCCTCCCCTGTTCTCCCCTCCTCTCCTCCCTCTCCCCTCCCTCCCTCTTGTCCCCTCCCTCCCCTCTTCCCTCCCCTCTTCTCCCTCCCCTGTCCCTCCCCTCCCTCTCCCTCCCTCTTCCCCTCCCTCCCTCTCTCCCTCCCCTCCGTTCCCTCCCCTCCCCCTCCCCCCTCTCTCCTCTCCCTCTCCTCCCCCCTCTCTCCCTCCCCTTCCTCCCCCCCCCTCCCCTCCTCCCTGTTCTCCCCTCCCCTCTCCTCCCCTGTTCTCGCCCTCCCCTCTCCTCCCCTGTTCTCCCTCCCCTCTCCTCCCTGTTCTCCTCCCTCTCCTCCCGTTCTCTCCTCCCCTCCCTCTCCTCCTCCCTCCCCTCCTCTCTACTCCTCCCCTCTCCTCTCCTCCCCTCCCCTCCCCTCTCCTCTCCTCCCCTTCTCCCTCTCCTCCCCTGTTCTCCCTCCCTCTCCTCCCCTGTTCTCCCCTCCCCTCCCCTCTCTCCCCCCCCTCCCTCCCCTCCTCCCTCCCTCCCCTCCCTCCTCCCTCCCCTCCCCCCTCCCCTCCCTCCCTCCCCCCCTCTCCTCCCCTCCCCTC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7664:HG2_PB_PB10Xdip_6419:HG2_PB_pbsv_12610:HG2_PB_assemblyticsfalcon_4750:HG2_PB_SVrefine2Falcon1plusDovetail_2095:HG4_PB_SVrefine2Falcon1Dovetail_7706:HG2_PB_SVrefine2Falcon2Bionano_6159:HG2_PB_SVrefine2PBcRplusDovetail_1998:HG2_PB_SVrefine2PB10Xhap12_9079;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7664;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0791311;ClusterMaxSizeDiff=0.0791311;ClusterMaxEditDist=0.233964;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2468;DistBack=-12;DistForward=1;DistMin=-12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=50;REFWIDENED=11:99690014-99690063;PctSeqSimilarity=0.9204;PctSizeSimilarity=0.9014;PctRecOverlap=0.9014;SizeDiff=-270;StartDistance=-21;EndDistance=-21;GTMatch=1;TruScore=90;MatchId=1000.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:84:1/1:2:14:1:11:./.:2:0:1:0:./.:3:1:./.:8:76:.:2805:.
chr11	100619411	HG2_Ill_GATKHC_20189	A	AATAGATTGAATGCATTTGGGCCATCTATGGGTTACTGGGTTAAGGATTTTTGATTAGGAAGGCTACGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8824:HG2_PB_pbsv_12612:HG4_Ill_svaba_15771:HG2_PB_HySA_22921:HG4_PB_HySA_18349:HG4_Ill_SVrefine2DISCOVARDovetail_8968:HG4_PB_pbsv_12606:HG4_Ill_Krunchall_17455:HG4_Ill_GATKHC_20195:HG4_Ill_GATKHCSBGrefine_8728:HG4_Ill_250bpfermikitraw_16655:HG2_PB_SVrefine2Falcon2Bionano_6160:HG2_Ill_svaba_15699:HG2_Ill_manta_3514:HG2_Ill_Krunchall_17149:HG2_Ill_GATKHC_20189:HG2_Ill_GATKHCSBGrefine_8476:HG2_Ill_250bpfermikitraw_16796;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8824:HG4_Ill_svaba_15771:HG4_Ill_SVrefine2DISCOVARDovetail_8968:HG4_Ill_Krunchall_17455:HG4_Ill_GATKHC_20195:HG4_Ill_GATKHCSBGrefine_8728:HG4_Ill_250bpfermikitraw_16655:HG2_PB_SVrefine2Falcon2Bionano_6160:HG2_Ill_svaba_15699:HG2_Ill_manta_3514:HG2_Ill_Krunchall_17149:HG2_Ill_GATKHC_20189:HG2_Ill_GATKHCSBGrefine_8476:HG2_Ill_250bpfermikitraw_16796;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0735294;ClusterMaxSizeDiff=0.057971;ClusterMaxEditDist=0.328571;PBcalls=5;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=68;DistBack=66883;DistForward=21031;DistMin=21031;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=11:100619412-100619479;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1002.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:0|1:33:3:2:25:0|1:9:0:0:23:0/1:22:13:./.:.:.:.:.:.
chr11	100650283	HG2_Ill_GATKHC_20190	A	ATACATACGTATATATATACGTATACATACGTATATATACGTATATATACG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_16797:HG4_Ill_manta_2982:HG2_Ill_manta_3515:HG4_Ill_GATKHC_20196:HG4_Ill_GATKHCSBGrefine_8729:HG2_Ill_GATKHC_20190:HG2_Ill_GATKHCSBGrefine_8477:HG4_PB_pbsv_12607:HG2_PB_HySA_22922;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8477:HG2_Ill_GATKHC_20190:HG4_Ill_GATKHCSBGrefine_8729:HG4_Ill_GATKHC_20196;NumExactMatchSVs=4;ClusterMaxShiftDist=0.146789;ClusterMaxSizeDiff=0.12844;ClusterMaxEditDist=0.183486;PBcalls=2;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=23;DistForward=21317;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=93;REFWIDENED=11:100650237-100650329;PctSeqSimilarity=0.9758;PctSizeSimilarity=0.9615;PctRecOverlap=0.7925;SizeDiff=-2;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=90;MatchId=1003.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:32:0|1:36:2:1:27:./.:19:0:2:9:0/1:12:6:./.:.:.:.:.:.
chr11	100781379	HG2_PB_SVrefine2Falcon2Bionano_6161	C	CAAATAAGACTTGGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7707:HG2_PB_pbsv_12614:HG3_PB_pbsv_12297:HG3_PB_HySA_19028:HG2_Ill_breakscan11_4322:HG4_PB_HySA_18350:HG4_PB_pbsv_12608:HG4_Ill_MetaSV_915:HG2_PB_HySA_22925:HG2_PB_PB10Xdip_4855:HG2_PB_assemblyticsfalcon_4756:HG3_PB_SVrefine2PBcRDovetail_5932:HG2_PB_SVrefine2PBcRplusDovetail_1999:HG2_PB_SVrefine2PB10Xhap12_9080:HG2_PB_SVrefine2Falcon2Bionano_6161:HG3_PB_SVrefine2Falcon1Dovetail_7665:HG2_PB_SVrefine2Falcon1plusDovetail_2096;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6161:HG2_PB_SVrefine2PB10Xhap12_9080:HG2_PB_SVrefine2PBcRplusDovetail_1999;NumExactMatchSVs=3;ClusterMaxShiftDist=0.128637;ClusterMaxSizeDiff=0.128637;ClusterMaxEditDist=0.194145;PBcalls=15;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=7530;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:100781380-100781393;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9969;PctRecOverlap=0.9878;SizeDiff=-1;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=1004.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:./.:0:4:1:13:1/1:0:6:0:9:1/1:0:23:1/1:2:79:.:.:.
chr11	100911782	HG3_PB_pbsv_12298	A	AAATGTTTTCTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGGGCCGAGGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAACCCCGTCTCTACTAAAATACAAAAAATTAGCTGGCGTAGTGTCGGGCGCTGTAGTCCCAGCTACTTGACGAGGCTGAGGCAGGGAGGGGGGAAAGAAATTGGCCCGTGAACCCGGATGCGGGAGCTTGCAGTGAGCGAATCCCGCCACTGCACTCCCAGCCTGGGACGACAGAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2097:HG2_PB_pbsv_12615:HG3_PB_pbsv_12298:HG2_PB_assemblyticsfalcon_4758:HG2_Ill_breakscan11_4323:HG2_PB_HySA_22928:HG2_PB_SVrefine2Falcon2Bionano_6162;NumClusterSVs=7;ExactMatchIDs=HG3_PB_pbsv_12298;NumExactMatchSVs=1;ClusterMaxShiftDist=0.1125;ClusterMaxSizeDiff=0.1125;ClusterMaxEditDist=0.171875;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=331;DistBack=2;DistForward=109;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=11:100911783-100911793;PctSeqSimilarity=0.9485;PctSizeSimilarity=0.9698;PctRecOverlap=0.9698;SizeDiff=10;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=96;MatchId=1005.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:34:0|1:33:1:2:29:./.:0:2:24:0:0/1:38:6:0/1:7:13:.:.:.
chr11	101796436	HG4_PB_HySA_18357	G	GGGTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACAAAAAAAAAAAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGGAAGGGGCGGGCAATAATGTGATTAATGCAACTTCTTAAGGCAAAGAAATTGAAATAAATTTTAAGAAGAGCTCAACGGGAACATTCAGATCGTTATAAAACACTATAATATAGGCACATAAAAGCTCAGATGAAGAGACAAAATTCTATGTAGTTAACTGGCAGAATAAGAGAAAAACACCACAAAAATGGGGAAAATTGTGCAGTGAAGAAGAGGAAAGAATACCAAATGACAGATGAGGGACAAGTACTTTGGAAGGGTCACTAAAATCTACGATAAAAAAGATTCCTTAAATATCCTAGAGGCAGAAAAAAGTACTTAGAGGATCAGTGAAATACTTGGTGGACATGAAGTGTGAGGTAGCTACATTATCTGTTTGTGAGAATGATGGAGTTTGGAGTTTCTCATAAAAGCATTAAAAAAGTACTCCTAGAGTAATTAAGAAGGAATTATACGTTAAACAATAAGTCATATTTATTGAACCTCCATAGATATATATGTATGCTATAAGCCAAAAAAAAAAACAGATTCAAATAATTTTAGATATAAATTTAAAACTATCAATATCAATAGGTCTAAATATTCATGGGCAATACATCCATACTACATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTGGTTTTTTGTTTTTTGAGATGAAGTCTCGCTCTGTCGCCCATGCTGGA	20	PASS	ClusterIDs=HG4_Ill_MetaSV_918:HG4_PB_pbsv_12615:HG2_PB_pbsv_12622:HG3_PB_pbsv_12305:HG4_PB_HySA_18357:HG3_Ill_MetaSV_956:HG2_PB_assemblyticsfalcon_4769:HG2_Ill_breakscan11_4324:HG2_PB_PB10Xdip_4859:HG2_PB_SVrefine2Falcon2Bionano_6167:HG3_PB_SVrefine2Falcon1Dovetail_7669:HG2_Ill_GATKHCSBGrefine_8480:HG2_10X_SVrefine210Xhap12_8831:HG2_PB_SVrefine2PBcRplusDovetail_2002:HG3_PB_SVrefine2PBcRDovetail_5936:HG2_Ill_SVrefine2DISCOVARplusDovetail_2350:HG4_Ill_SVrefine2DISCOVARDovetail_8978:HG3_Ill_SVrefine2DISCOVARDovetail_9208:HG2_PB_SVrefine2PB10Xhap12_9084:HG2_PB_SVrefine2Falcon1plusDovetail_2102:HG4_Ill_GATKHCSBGrefine_8734:HG4_PB_SVrefine2Falcon1Dovetail_7711:HG4_PB_SVrefine2PBcRDovetail_6380;NumClusterSVs=23;ExactMatchIDs=HG4_PB_HySA_18357;NumExactMatchSVs=1;ClusterMaxShiftDist=0.128386;ClusterMaxSizeDiff=0.128386;ClusterMaxEditDist=0.235698;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=817;DistBack=-6;DistForward=77509;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=11:101796437-101796436;PctSeqSimilarity=0.9865;PctSizeSimilarity=0.9963;PctRecOverlap=0.9976;SizeDiff=3;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=1006.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:1/1:0:31:0:32:./.:1:11:0:7:./.:2:26:./.:8:84:.:.:.
chr11	102169753	HG2_PB_HySA_22941	C	CAGTTTGCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGCGGATCTCGCTCTGTCGCCCAGGCTGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTTCCCGGGTTCACGCATTCTCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCTACCACGCCCGGCTAATTTTTTATTTTTAGTAGAGACGGGGTTTACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCGCCCGCCTCGGCCTCCCAAAGT	10	PASS	ClusterIDs=HG2_PB_HySA_22941:HG2_PB_pbsv_12624:HG3_PB_pbsv_12306:HG3_PB_SVrefine2Falcon1Dovetail_7670:HG2_PB_SVrefine2PB10Xhap12_9085;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_22941;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.142609;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=275;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=11:102169754-102169769;PctSeqSimilarity=0.9683;PctSizeSimilarity=0.945;PctRecOverlap=0.945;SizeDiff=-16;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=1007.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:28:0|1:22:2:1:21:1|0:0:5:34:0:0/1:21:5:./.:.:.:.:.:.
chr11	102723173	HG3_Ill_150bpfermikitraw_15904	A	ACATATATATATATATATATACATATATATATATATATACACATATATATATATACACATATATATATACG	20	PASS	ClusterIDs=HG2_PB_HySA_22949:HG2_PB_pbsv_12628:HG3_PB_pbsv_12313:HG2_Ill_breakscan11_4325:HG3_PB_HySA_19046:HG3_Ill_Spiral_13133:HG3_Ill_Krunchall_16826:HG3_Ill_GATKHC_20083:HG3_Ill_GATKHCSBGrefine_8381:HG3_Ill_250bpfermikitraw_16362:HG3_Ill_150bpfermikitraw_15904:HG2_Ill_SpiralSDKrefine_3035:HG2_Ill_GATKHC_20218:HG2_Ill_GATKHCSBGrefine_8483:HG2_Ill_250bpfermikitraw_16820:HG2_Ill_150bpfermikitraw_15867;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15867:HG2_Ill_250bpfermikitraw_16820:HG2_Ill_GATKHCSBGrefine_8483:HG2_Ill_GATKHC_20218:HG2_Ill_SpiralSDKrefine_3035:HG3_Ill_150bpfermikitraw_15904:HG3_Ill_250bpfermikitraw_16362:HG3_Ill_GATKHCSBGrefine_8381:HG3_Ill_GATKHC_20083:HG3_Ill_Krunchall_16826:HG3_Ill_Spiral_13133;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.165517;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=0;DistForward=11;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=11:102723174-102723191;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1008.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:33:0|1:32:4:4:31:./.:1:14:24:1:0/1:17:14:./.:.:.:.:.:.
chr11	103201266	HG2_Ill_manta_3520	A	AACAATAAATTGTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTATTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9092:HG4_PB_pbsv_12620:HG2_PB_HySA_22958:HG2_PB_pbsv_12631:HG3_PB_pbsv_12316:HG3_PB_HySA_19053:HG4_PB_HySA_18371:HG2_PB_HySA_22957:HG2_PB_assemblyticsfalcon_4779:HG2_Ill_breakscan11_4326:HG2_PB_PB10Xdip_4885:HG3_PB_SVrefine2PBcRDovetail_5943:HG2_Ill_MetaSV_875:HG4_PB_SVrefine2Falcon1Dovetail_7715:HG3_PB_SVrefine2Falcon1Dovetail_7674:HG4_PB_SVrefine2PBcRDovetail_6383:HG4_Ill_MetaSV_920:HG4_Ill_GATKHCSBGrefine_8739:HG3_Ill_GATKHCSBGrefine_8384:HG2_PB_SVrefine2PBcRplusDovetail_2008:HG2_Ill_manta_3520:HG2_Ill_GATKHCSBGrefine_8486:HG2_PB_SVrefine2Falcon1plusDovetail_2106;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8486:HG2_Ill_manta_3520:HG2_PB_SVrefine2PBcRplusDovetail_2008:HG3_Ill_GATKHCSBGrefine_8384:HG4_Ill_GATKHCSBGrefine_8739:HG4_Ill_MetaSV_920;NumExactMatchSVs=6;ClusterMaxShiftDist=0.173913;ClusterMaxSizeDiff=0.173913;ClusterMaxEditDist=0.228654;PBcalls=16;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=323;DistBack=19837;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:103201267-103201280;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1009.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:45:0|1:22:4:0:42:1|0:0:12:20:0:0/1:38:9:0/1:8:34:.:.:.
chr11	103792588	HG2_PB_SVrefine2Falcon2Bionano_6173	T	TAAATTTCAATTAGTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACGGGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCATTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_19057:HG2_PB_HySA_22961:HG3_PB_pbsv_12318:HG4_PB_SVrefine2Falcon1Dovetail_7717:HG2_PB_pbsv_12633:HG2_PB_HySA_22960:HG3_PB_SVrefine2PBcRDovetail_5945:HG3_Ill_MetaSV_962:HG3_Ill_GATKHCSBGrefine_8386:HG2_PB_SVrefine2Falcon2Bionano_6173:HG2_Ill_MetaSV_877:HG2_Ill_GATKHCSBGrefine_8488:HG2_PB_SVrefine2Falcon1plusDovetail_2108:HG3_PB_SVrefine2Falcon1Dovetail_7676;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8488:HG2_Ill_MetaSV_877:HG2_PB_SVrefine2Falcon2Bionano_6173:HG3_Ill_GATKHCSBGrefine_8386:HG3_Ill_MetaSV_962:HG3_PB_SVrefine2PBcRDovetail_5945;NumExactMatchSVs=6;ClusterMaxShiftDist=0.131579;ClusterMaxSizeDiff=0.128655;ClusterMaxEditDist=0.241135;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=328;DistBack=11099;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=11:103792589-103792604;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1010.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:0|1:31:1:0:29:./.:0:4:19:0:0/1:22:25:0/1:8:30:.:.:.
chr11	104786590	HG3_Ill_GATKHCSBGrefine_8389	T	TAAGAATTTAAATATTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4327:HG4_PB_pbsv_12631:HG4_PB_SVrefine2Falcon1Dovetail_7722:HG3_PB_pbsv_12325:HG2_PB_SVrefine2PBcRplusDovetail_2013:HG2_PB_pbsv_12639:HG2_PB_SVrefine2PB10Xhap12_9098:HG2_PB_SVrefine2Falcon2Bionano_6177:HG4_PB_SVrefine2PBcRDovetail_6389:HG3_PB_SVrefine2Falcon1Dovetail_7681:HG3_Ill_MetaSV_967:HG3_Ill_GATKHCSBGrefine_8389:HG2_Ill_MetaSV_882:HG2_Ill_GATKHCSBGrefine_8491:HG2_10X_SVrefine210Xhap12_8840:HG2_PB_SVrefine2Falcon1plusDovetail_2112:HG3_PB_HySA_19074:HG2_PB_HySA_22978:HG2_PB_PB10Xdip_4903;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8840:HG2_Ill_GATKHCSBGrefine_8491:HG2_Ill_MetaSV_882:HG3_Ill_GATKHCSBGrefine_8389:HG3_Ill_MetaSV_967:HG3_PB_SVrefine2Falcon1Dovetail_7681:HG4_PB_SVrefine2PBcRDovetail_6389;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0758725;ClusterMaxSizeDiff=0.0545455;ClusterMaxEditDist=0.31454;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=322;DistBack=20567;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=11:104786591-104786608;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1011.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:0:18:0:12:1/1:0:5:0:10:1/1:0:18:1/1:2:62:.:.:.
chr11	105836037	HG4_Ill_MetaSV_929	T	TAAGAATTAACACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCTACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_4905:HG2_PB_HySA_22988:HG2_PB_pbsv_12641:HG3_PB_pbsv_12327:HG2_Ill_breakscan11_4328:HG4_PB_pbsv_12634:HG3_PB_SVrefine2Falcon1Dovetail_7683:HG4_PB_SVrefine2PBcRDovetail_6391:HG4_Ill_MetaSV_929:HG2_PB_SVrefine2Falcon2Bionano_6179:HG2_PB_SVrefine2Falcon1plusDovetail_2114:HG4_PB_HySA_18394:HG2_PB_SVrefine2PB10Xhap12_9100;NumClusterSVs=13;ExactMatchIDs=HG4_Ill_MetaSV_929:HG4_PB_SVrefine2PBcRDovetail_6391;NumExactMatchSVs=2;ClusterMaxShiftDist=0.228125;ClusterMaxSizeDiff=0.221875;ClusterMaxEditDist=0.265625;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=330;DistBack=16753;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:105836038-105836051;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1012.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:1|0:0:29:26:1:1|0:0:7:26:0:0/1:26:11:0/1:10:35:.:.:.
chr11	106044578	HG2_Ill_GATKHCSBGrefine_8492	T	TTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAGAAATAGCACG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7684:HG3_PB_pbsv_12328:HG2_PB_pbsv_12642:HG3_Ill_MetaSV_969:HG3_Ill_GATKHCSBGrefine_8390:HG2_Ill_MetaSV_884:HG2_Ill_GATKHCSBGrefine_8492:HG4_Ill_MetaSV_930:HG4_PB_pbsv_12635:HG4_PB_SVrefine2Falcon1Dovetail_7725:HG2_PB_SVrefine2Falcon2Bionano_6180;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8492:HG2_Ill_MetaSV_884:HG3_Ill_GATKHCSBGrefine_8390:HG3_Ill_MetaSV_969;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0808709;ClusterMaxSizeDiff=0.0777605;ClusterMaxEditDist=0.2118;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=-3;DistForward=2;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=11:106044565-106044581;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1013.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:25:0|1:38:0:1:27:0|1:32:0:1:7:0/1:28:13:0/1:9:41:.:.:.
chr11	106170475	HG4_PB_pbsv_12639	C	CCCTTTTGCGCGGCGCGGGCGCGGTGGCTCACGCCTGTAATGCAGCCACTGGTTGGGAGGCCGAGGCCGGGCGGATCACGAAGTCAGGAGTATCGAGACCATCCGGGCGGCTAAAACGGTGAACCGTGCTCTACTAAAAATACAAAAAATTAAGCCGGGCGTAGTGGCGGGCGCCTGTAGCTCCTAGCTTAGCTTGGGAGGCTGAAGGCAGGAGATGGCGTGAACCCGGGAGGCCGGAGCTTGCCAGTGAGCCGAGATTCGCCGCCACTGCACTCCAGCCTGGGCGAGCAGAGCGAGACTCCGTCCTCAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4329:HG2_PB_pbsv_12646:HG2_PB_SVrefine2Falcon2Bionano_6184:HG4_PB_pbsv_12639:HG3_PB_pbsv_12332;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_12639;NumExactMatchSVs=1;ClusterMaxShiftDist=0.100147;ClusterMaxSizeDiff=0.0972018;ClusterMaxEditDist=0.230657;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=355;DistBack=7;DistForward=17934;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=11:106170476-106170475;PctSeqSimilarity=0.9325;PctSizeSimilarity=0.9099;PctRecOverlap=0.9099;SizeDiff=32;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=91;MatchId=1014.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:0|1:33:0:1:33:./.:29:0:0:3:0/1:21:11:0/1:5:14:.:.:.
chr11	106202443	HG3_Ill_150bpfermikitraw_15944	T	TCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	20	PASS	ClusterIDs=HG3_PB_HySA_19088:HG2_PB_pbsv_12647:HG2_Ill_breakscan11_4330:HG3_Ill_250bpfermikitraw_16403:HG3_Ill_150bpfermikitraw_15944:HG2_Ill_250bpfermikitraw_16858:HG3_PB_pbsv_12333:HG2_PB_HySA_22991;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16858:HG3_Ill_150bpfermikitraw_15944:HG3_Ill_250bpfermikitraw_16403;NumExactMatchSVs=3;ClusterMaxShiftDist=0.14876;ClusterMaxSizeDiff=0.115702;ClusterMaxEditDist=0.227642;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=-1;DistForward=32;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=45;REFWIDENED=11:106202434-106202478;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1015.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:39:./.:5:10:8:26:./.:4:9:1:9:0/1:12:22:./.:.:.:.:.:.
chr11	106533910	HG2_Ill_250bpfermikitraw_16862	C	CTGAGGTGGTGGGTGGATTAGGTGAGGTGGTGGGTGGATTAGGTGAGGTGGTGGGTGGATTAGGTGAGGTGGTGGGTGGATTAGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9105:HG2_PB_HySA_22993:HG2_PB_pbsv_12649:HG3_PB_HySA_19089:HG4_PB_pbsv_12641:HG4_Ill_SVrefine2DISCOVARDovetail_9001:HG3_PB_pbsv_12335:HG3_Ill_SVrefine2DISCOVARDovetail_9230:HG2_PB_PB10Xdip_4909:HG3_Ill_250bpfermikitraw_16405:HG2_PB_SVrefine2PBcRplusDovetail_2020:HG2_PB_SVrefine2Falcon2Bionano_6186:HG2_PB_SVrefine2Falcon1plusDovetail_2118:HG2_Ill_SVrefine2DISCOVARplusDovetail_2372:HG2_Ill_Krunchall_17212:HG2_Ill_250bpfermikitraw_16862;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16862:HG2_Ill_Krunchall_17212:HG2_Ill_SVrefine2DISCOVARplusDovetail_2372:HG2_PB_SVrefine2Falcon1plusDovetail_2118:HG2_PB_SVrefine2Falcon2Bionano_6186:HG2_PB_SVrefine2PBcRplusDovetail_2020:HG3_Ill_250bpfermikitraw_16405:HG3_Ill_SVrefine2DISCOVARDovetail_9230:HG4_Ill_SVrefine2DISCOVARDovetail_9001;NumExactMatchSVs=9;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.2;ClusterMaxEditDist=0.314465;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=24463;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=65;REFWIDENED=11:106533911-106533975;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1016.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:./.:1:2:2:8:1/1:1:9:0:7:1/1:1:23:./.:.:.:.:.:.
chr11	106839502	HG2_Ill_svaba_15742	T	TAGACCATAACATTGGTGCATAACAGTGTCTAAGCTGCCCACAAAGGCTAAAATAAAATTCATTTATAACACAGTGGAAAATTCTGAAAAGTACTTCCAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4331:HG2_PB_pbsv_12655:HG3_PB_pbsv_12340:HG4_PB_pbsv_12647:HG4_PB_SVrefine2PBcRDovetail_6399:HG4_PB_SVrefine2Falcon1Dovetail_7733:HG4_Ill_svaba_15818:HG4_Ill_manta_2993:HG4_Ill_SVrefine2DISCOVARDovetail_9004:HG4_Ill_MetaSV_934:HG4_Ill_Krunchall_17519:HG4_Ill_GATKHCSBGrefine_8753:HG4_Ill_Cortex_664:HG4_Ill_250bpfermikitraw_16728:HG4_Ill_150bpfermikitraw_16078:HG3_PB_SVrefine2PBcRDovetail_5959:HG3_PB_SVrefine2Falcon1Dovetail_7691:HG3_Ill_svaba_15895:HG3_Ill_manta_2877:HG3_Ill_Spiral_13171:HG3_Ill_SVrefine2DISCOVARDovetail_9234:HG3_Ill_MetaSV_974:HG3_Ill_Krunchall_16874:HG3_Ill_GATKHCSBGrefine_8397:HG3_Ill_Cortex_697:HG3_Ill_250bpfermikitraw_16408:HG3_Ill_150bpfermikitraw_15945:HG2_PB_SVrefine2PBcRplusDovetail_2025:HG2_PB_SVrefine2PB10Xhap12_9109:HG2_PB_SVrefine2Falcon2Bionano_6190:HG2_PB_SVrefine2Falcon1plusDovetail_2123:HG2_Ill_svaba_15742:HG2_Ill_manta_3526:HG2_Ill_SpiralSDKrefine_3063:HG2_Ill_SVrefine2DISCOVARplusDovetail_2374:HG2_Ill_MetaSV_888:HG2_Ill_Krunchall_17216:HG2_Ill_GATKHC_20263:HG2_Ill_GATKHCSBGrefine_8500:HG2_Ill_Cortex_1593:HG2_Ill_250bpfermikitraw_16865:HG2_Ill_150bpfermikitraw_15900:HG2_10X_SVrefine210Xhap12_8850:HG2_PB_PB10Xdip_4912;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8850:HG2_Ill_150bpfermikitraw_15900:HG2_Ill_250bpfermikitraw_16865:HG2_Ill_Cortex_1593:HG2_Ill_GATKHCSBGrefine_8500:HG2_Ill_GATKHC_20263:HG2_Ill_Krunchall_17216:HG2_Ill_MetaSV_888:HG2_Ill_SVrefine2DISCOVARplusDovetail_2374:HG2_Ill_SpiralSDKrefine_3063:HG2_Ill_manta_3526:HG2_Ill_svaba_15742:HG2_PB_SVrefine2Falcon1plusDovetail_2123:HG2_PB_SVrefine2Falcon2Bionano_6190:HG2_PB_SVrefine2PB10Xhap12_9109:HG2_PB_SVrefine2PBcRplusDovetail_2025:HG3_Ill_150bpfermikitraw_15945:HG3_Ill_250bpfermikitraw_16408:HG3_Ill_Cortex_697:HG3_Ill_GATKHCSBGrefine_8397:HG3_Ill_Krunchall_16874:HG3_Ill_MetaSV_974:HG3_Ill_SVrefine2DISCOVARDovetail_9234:HG3_Ill_Spiral_13171:HG3_Ill_manta_2877:HG3_Ill_svaba_15895:HG3_PB_SVrefine2Falcon1Dovetail_7691:HG3_PB_SVrefine2PBcRDovetail_5959:HG4_Ill_150bpfermikitraw_16078:HG4_Ill_250bpfermikitraw_16728:HG4_Ill_Cortex_664:HG4_Ill_GATKHCSBGrefine_8753:HG4_Ill_Krunchall_17519:HG4_Ill_MetaSV_934:HG4_Ill_SVrefine2DISCOVARDovetail_9004:HG4_Ill_manta_2993:HG4_Ill_svaba_15818:HG4_PB_SVrefine2Falcon1Dovetail_7733:HG4_PB_SVrefine2PBcRDovetail_6399;NumExactMatchSVs=39;ClusterMaxShiftDist=0.0585366;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.181818;PBcalls=12;Illcalls=31;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=30;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=100;DistBack=24540;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=11:106839503-106839503;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1017.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:3:22:1:27:1/1:1:51:1:34:1/1:0:45:./.:.:.:.:.:.
chr11	107983872	HG2_PB_SVrefine2PB10Xhap12_9110	A	AGCTGACATGGTGAAAACCCATCTCTACAAAAAATACAAAAAGTAGCCAGGTGTGTTGGCATGCGCCTGTAGTCCCAGCTACTCAAAGGCTGAGGTGGGAGGATCACTTGGGCGGGAGAGGTTGAGGCTGCAGAGAGCAGTGATCGCGCCACTGCACTCCTGCCTGGGTGACAGAGTGAGACCCTTTCTCAAAAAAAAAAAAAAAAAAAAAACAAACTTTCTAAAATACCCTCTTGGATCTTTGTTTTTGTTTTTGTTTTGTTTTGTTCTAAGAGATCCTGTCAACATTTTAAAAGAAGACACTAGGCCAGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACAAGGTCAGGAGATCAAGACCATCCTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6400:HG2_PB_pbsv_12658:HG3_PB_pbsv_12344:HG2_PB_HySA_23014:HG4_PB_HySA_18415:HG2_Ill_MetaSV_889:HG3_PB_HySA_19109:HG2_PB_PB10Xdip_4914:HG4_PB_pbsv_12650:HG4_Ill_MetaSV_935:HG2_PB_SVrefine2Falcon1plusDovetail_2124:HG2_Ill_SVrefine2DISCOVARplusDovetail_2377:HG3_PB_SVrefine2PBcRDovetail_5960:HG2_10X_SVrefine210Xhap12_8853:HG3_PB_SVrefine2Falcon1Dovetail_7692:HG4_PB_SVrefine2Falcon1Dovetail_7734:HG2_PB_SVrefine2PBcRplusDovetail_2026:HG2_PB_SVrefine2PB10Xhap12_9110:HG2_PB_SVrefine2Falcon2Bionano_6191;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6191:HG2_PB_SVrefine2PB10Xhap12_9110:HG2_PB_SVrefine2PBcRplusDovetail_2026;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0786825;ClusterMaxSizeDiff=0.0786825;ClusterMaxEditDist=0.19708;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=528;DistBack=3268;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=215;REFWIDENED=11:107983873-107984087;PctSeqSimilarity=0.9675;PctSizeSimilarity=0.9851;PctRecOverlap=0.6406;SizeDiff=-8;StartDistance=-189;EndDistance=-189;GTMatch=0;TruScore=86;MatchId=1018.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:0:15:1:21:./.:0:2:0:5:./.:0:6:./.:3:55:.:572:.
chr11	109056951	HG2_Ill_SVrefine2DISCOVARplusDovetail_2382	T	TGAGTGTGTACGTATTTGTGTATGATCAAAAATGTTGAATTTTTTTCCTTTTAATAATAATACCAATTTTTTAAAAAATTATA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_4916:HG4_PB_pbsv_12654:HG2_PB_HySA_23019:HG2_PB_pbsv_12662:HG3_Ill_SVrefine2DISCOVARDovetail_9243:HG3_Ill_Krunchall_16885:HG3_Ill_GATKHC_20142:HG3_Ill_GATKHCSBGrefine_8399:HG3_Ill_250bpfermikitraw_16416:HG4_PB_HySA_18418:HG2_PB_SVrefine2PB10Xhap12_9113:HG4_Ill_SVrefine2DISCOVARDovetail_9014:HG4_Ill_Krunchall_17531:HG4_Ill_GATKHC_20283:HG4_Ill_GATKHCSBGrefine_8756:HG4_Ill_250bpfermikitraw_16739:HG2_PB_assemblyticsfalcon_4831:HG2_PB_SVrefine2PBcRplusDovetail_2028:HG2_Ill_SVrefine2DISCOVARplusDovetail_2382:HG2_Ill_Krunchall_17227:HG2_Ill_GATKHC_20277:HG2_Ill_GATKHCSBGrefine_8503:HG2_Ill_250bpfermikitraw_16872:HG2_Ill_150bpfermikitraw_15910;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15910:HG2_Ill_250bpfermikitraw_16872:HG2_Ill_GATKHCSBGrefine_8503:HG2_Ill_GATKHC_20277:HG2_Ill_Krunchall_17227:HG2_Ill_SVrefine2DISCOVARplusDovetail_2382:HG2_PB_SVrefine2PBcRplusDovetail_2028:HG2_PB_assemblyticsfalcon_4831:HG4_Ill_250bpfermikitraw_16739:HG4_Ill_GATKHCSBGrefine_8756:HG4_Ill_GATKHC_20283:HG4_Ill_Krunchall_17531:HG4_Ill_SVrefine2DISCOVARDovetail_9014;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0946746;ClusterMaxSizeDiff=0.0828402;ClusterMaxEditDist=0.222222;PBcalls=8;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=82;DistBack=7;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=82;REFWIDENED=11:109056952-109057033;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1019.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:38:0|1:17:1:2:29:0|1:9:0:2:23:0/1:23:23:./.:.:.:.:.:.
chr11	111187788	HG3_Ill_150bpfermikitraw_15983	T	TATATATATATATATATATATATATATATATATATATACCACATCATATATATATATATATATATATATATACCACATC	20	PASS	ClusterIDs=HG2_PB_HySA_23041:HG2_PB_HySA_23042:HG3_PB_pbsv_12356:HG3_Ill_GATKHC_20171:HG3_Ill_150bpfermikitraw_15983:HG2_Ill_GATKHC_20305:HG3_PB_HySA_19132;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_20305:HG3_Ill_150bpfermikitraw_15983:HG3_Ill_GATKHC_20171;NumExactMatchSVs=3;ClusterMaxShiftDist=0.177215;ClusterMaxSizeDiff=0.177215;ClusterMaxEditDist=0.177215;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=78;DistBack=9;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=11:111187789-111187840;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1020.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:0|1:31:2:1:29:./.:1:6:3:6:0/1:16:15:./.:.:.:.:.:.
chr11	112084608	HG2_Ill_MetaSV_893	C	CTAAGACTTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATCCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAA	20	PASS	ClusterIDs=HG3_PB_HySA_19139:HG2_PB_SVrefine2PBcRplusDovetail_2037:HG2_PB_pbsv_12671:HG2_PB_PB10Xdip_4931:HG2_PB_SVrefine2PB10Xhap12_9121:HG4_PB_pbsv_12662:HG2_Ill_breakscan11_4332:HG4_PB_HySA_18439:HG2_PB_HySA_23047:HG4_Ill_MetaSV_939:HG2_Ill_MetaSV_893:HG3_PB_SVrefine2Falcon1Dovetail_7702:HG4_PB_SVrefine2Falcon1Dovetail_7743;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_MetaSV_893:HG4_Ill_MetaSV_939;NumExactMatchSVs=2;ClusterMaxShiftDist=0.208674;ClusterMaxSizeDiff=0.206219;ClusterMaxEditDist=0.272504;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1289;DistBack=59202;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=11:112084609-112084617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1021.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:35:./.:21:12:5:23:0|1:26:0:0:5:0/1:37:14:0/1:57:192:.:1254:.
chr11	112202500	HG2_PB_SVrefine2Falcon1plusDovetail_2133	C	CCTCCTGGGTTCAAGTGATTCTCCTGCTTCAGCCTCCTGGATAGCTGGGATTACAGGTATGCACCACCACACCTAGCTAATTTTTTTGTATTTTTAGTAGAGACAGTGTTTCACCATGTTGGCCCAGGCTGGTCTCGAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2133:HG4_PB_pbsv_12663:HG4_PB_HySA_18441:HG2_PB_HySA_23051:HG2_PB_pbsv_12672:HG2_10X_SVrefine210Xhap12_8871:HG4_Ill_250bpfermikitraw_16766:HG4_PB_SVrefine2PBcRDovetail_6410:HG4_Ill_SVrefine2DISCOVARDovetail_9029;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2133:HG4_PB_SVrefine2PBcRDovetail_6410:HG4_Ill_SVrefine2DISCOVARDovetail_9029;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0819113;ClusterMaxSizeDiff=0.0694444;ClusterMaxEditDist=0.228374;PBcalls=6;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=138;DistBack=58760;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=153;REFWIDENED=11:112202501-112202653;PctSeqSimilarity=0.9968;PctSizeSimilarity=1;PctRecOverlap=0.8849;SizeDiff=0;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=96;MatchId=1022.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:17:./.:10:9:10:5:./.:3:0:0:16:0/1:19:16:./.:.:.:.:.:.
chr11	114713679	HG2_PB_SVrefine2PB10Xhap12_9125	T	TTTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAAGGAGCAAAATCACCAGCTAACATCATAATGACAGGACCAAATTCACACATAACAATATTAACTTTAAATGTAAATGGACTAAATGCTCCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCCTACACCCACGGAGTCTCACTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCTGGGAAGCTGGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGTCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTTCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGAGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTGCTGTCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAGAGGAACGCAGTTCCTCACCAGCAACGGAACAAAGCTGGATGGAGAATGACTTTGACGAGCGGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGGTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCTAATCTACGTCTGATTGGTGTACCTGAAAGTGATGCGGAGAATGGAACCAAGTTGGAAAACACTCTACAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACACCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCTGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGACCAATATTCAACA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7747:HG4_PB_pbsv_12669:HG2_PB_pbsv_12678:HG3_PB_pbsv_12365:HG2_PB_PB10Xdip_4943:HG4_PB_SVrefine2PBcRDovetail_6413:HG2_PB_SVrefine2Falcon1plusDovetail_2136:HG2_PB_SVrefine2PBcRplusDovetail_2042:HG2_PB_SVrefine2PB10Xhap12_9125:HG2_PB_SVrefine2Falcon2Bionano_6203:HG2_10X_SVrefine210Xhap12_8875:HG3_PB_SVrefine2Falcon1Dovetail_7707;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8875:HG2_PB_SVrefine2Falcon2Bionano_6203:HG2_PB_SVrefine2PB10Xhap12_9125:HG2_PB_SVrefine2PBcRplusDovetail_2042;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0604178;ClusterMaxSizeDiff=0.0587239;ClusterMaxEditDist=0.192771;PBcalls=11;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=1726;DistBack=13895;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=372;REFWIDENED=11:114713680-114714051;PctSeqSimilarity=0.9997;PctSizeSimilarity=1;PctRecOverlap=0.9902;SizeDiff=0;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=99;MatchId=1023.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:13:0:14:./.:0:2:0:4:1/1:0:20:./.:18:319:.:1604:.
chr11	115949496	HG2_Ill_GATKHC_20353	A	AGAGGGAAGGGGGAAAAAAGGGAGGGAGGGAGGGAAGGGGGAAAAAAGGAGGGAGGGAGGGAGG	20	PASS	ClusterIDs=HG3_PB_pbsv_12371:HG4_PB_pbsv_12673:HG4_PB_HySA_18461:HG2_PB_pbsv_12682:HG2_Ill_breakscan11_4333:HG3_Ill_manta_2888:HG3_Ill_Krunchall_16949:HG3_Ill_250bpfermikitraw_16478:HG4_Ill_svaba_15875:HG4_Ill_scalpel_11708:HG4_Ill_Krunchall_17595:HG4_Ill_GATKHC_20352:HG4_Ill_GATKHCSBGrefine_8770:HG4_Ill_250bpfermikitraw_16800:HG4_Ill_150bpfermikitraw_16152:HG3_Ill_svaba_15961:HG3_Ill_scalpel_12210:HG3_Ill_GATKHC_20221:HG3_Ill_GATKHCSBGrefine_8421:HG2_Ill_svaba_15803:HG2_Ill_scalpel_12008:HG2_Ill_manta_3536:HG2_Ill_SpiralSDKrefine_3114:HG2_Ill_Krunchall_17291:HG2_Ill_GATKHC_20353:HG2_Ill_GATKHCSBGrefine_8517:HG2_Ill_250bpfermikitraw_16937:HG2_Ill_150bpfermikitraw_15971:HG2_PB_PB10Xdip_4946:HG3_PB_HySA_19163:HG2_PB_HySA_23072:HG2_PB_SVrefine2Falcon2Bionano_6206:HG4_PB_SVrefine2PBcRDovetail_6415:HG4_PB_SVrefine2Falcon1Dovetail_7750:HG4_Ill_SVrefine2DISCOVARDovetail_9040:HG3_PB_SVrefine2Falcon1Dovetail_7710:HG3_Ill_SVrefine2DISCOVARDovetail_9270:HG2_PB_SVrefine2PBcRplusDovetail_2045:HG2_PB_SVrefine2PB10Xhap12_9129:HG2_Ill_SVrefine2DISCOVARplusDovetail_2403:HG2_10X_SVrefine210Xhap12_8878:HG2_PB_SVrefine2Falcon1plusDovetail_2139:HG3_PB_SVrefine2PBcRDovetail_5975;NumClusterSVs=43;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15971:HG2_Ill_250bpfermikitraw_16937:HG2_Ill_GATKHCSBGrefine_8517:HG2_Ill_GATKHC_20353:HG2_Ill_Krunchall_17291:HG2_Ill_SpiralSDKrefine_3114:HG2_Ill_manta_3536:HG2_Ill_scalpel_12008:HG2_Ill_svaba_15803:HG3_Ill_GATKHCSBGrefine_8421:HG3_Ill_GATKHC_20221:HG3_Ill_scalpel_12210:HG3_Ill_svaba_15961:HG4_Ill_150bpfermikitraw_16152:HG4_Ill_250bpfermikitraw_16800:HG4_Ill_GATKHCSBGrefine_8770:HG4_Ill_GATKHC_20352:HG4_Ill_Krunchall_17595:HG4_Ill_scalpel_11708:HG4_Ill_svaba_15875;NumExactMatchSVs=20;ClusterMaxShiftDist=0.108527;ClusterMaxSizeDiff=0.108527;ClusterMaxEditDist=0.210526;PBcalls=15;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=63;DistBack=-9;DistForward=-1;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=11:115949490-115949505;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1024.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:1/1:3:8:2:10:./.:1:16:1:13:1/1:1:28:./.:.:.:.:.:.
chr11	117131362	HG2_PB_SVrefine2PB10Xhap12_9137	T	TTTTTCTTTTTCCTTTTTTATTTGAGACGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATAATGGCGCGATCTTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCGGTTCTCCTTCCTTAGCCTCCCGAGTAGCTGGGGTTGCAGGCATGCGCCACCAAGCCCGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCGCCCAGCCGATCTCTATTTCTTTATTAAATTTTTTTTGCTAAATAATTTATATAAATAAAAAATTCAGGCCTGGTGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACTCCGTCTCTACTAAAAATACAAAATTAGCCGGGCATGGTGGCGCATGCCTGTAATCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATCCCTTGAACCTGGAAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCATTGCACTCCAGCCTGGTGACAGAGTGAAACTCTGTCTCGAAAAAAAAGAAAAATTCACACTGTTGTGATTATTATATCTTTATCATAAGTCATGAAATCAGATAATACAAGGTCTTCTACTTTTTTTCAAGACATTCTAGGTCCTTTGCATATTCTAGGTTCTCAGCATGTTCATGTACTTATTTTTTATTTTTCTGAGACAGTGTCTCAAGGCTGGAGTGCAGTGGCATGATCACGGCTCACTGTGGCCTCGACCTCCTGGGCTCAAGCAATCCTCTCATCTCAGCCTTCGCAGTAGCTGGGACTACAGATGCTCGTTACCACACCTAGCTAATTTTTTGTCTTTTTTGTGGAGACAAGGTTTCGCCATGTTATCCAGGCTGGTCTTGAACTCCTAGACTCAAGCAGTCGGCCCGCCTCAACCTCCCAAAATGCTGGGATTACAGGCGTGAGCCACCGTACCTGGCCTCATGTATTTTAGAATCAGTTTGCCAGTTTCTACAAAAAAAGATAAAACTGGTAGGAACATATATCAACTTGGGAAAAATTGACATCTTAACAATATTAAATCTTCTAATTCATAAATATGAAATATCTTTTTGTTGATTTAGGTCTTTATCTCAGCAACATTTTATTGTTTTCAGTGTACAGATCTTGCACATTTTTCTTTAAACTTATTCCTAAATATTTTATGTTCTTTGATGCTATTGTAAATGAAATTAAGAATTTTTTAAAATTTTAATTGCTGTTAAGTACAACTTATTTTTGTTTTTGGCCTTGTACCTGCTATTTTGCTAAATTTCTGTATCAGTGTATTAGTTGTTTTGTATATTCTTCAAGA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6422:HG4_PB_pbsv_12681:HG3_PB_pbsv_12379:HG4_PB_HySA_18476:HG2_PB_HySA_23105:HG2_PB_pbsv_12689:HG2_PB_PB10Xdip_4960:HG2_PB_HySA_23104:HG2_Ill_GATKHCSBGrefine_8519:HG3_Ill_GATKHCSBGrefine_8423:HG4_Ill_GATKHCSBGrefine_8772:HG2_PB_SVrefine2Falcon2Bionano_6213:HG4_PB_SVrefine2Falcon1Dovetail_7756:HG3_PB_SVrefine2Falcon1Dovetail_7716:HG2_PB_SVrefine2PBcRplusDovetail_2052:HG2_PB_SVrefine2PB10Xhap12_9137:HG2_Ill_SVrefine2DISCOVARplusDovetail_2412:HG2_PB_SVrefine2Falcon1plusDovetail_2145:HG4_Ill_SVrefine2DISCOVARDovetail_9046:HG3_Ill_SVrefine2DISCOVARDovetail_9275:HG3_PB_SVrefine2PBcRDovetail_5979;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9137:HG2_PB_SVrefine2PBcRplusDovetail_2052;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0598923;ClusterMaxSizeDiff=0.0592194;ClusterMaxEditDist=0.169435;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=1449;DistBack=9201;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=307;REFWIDENED=11:117131363-117131669;PctSeqSimilarity=0.9934;PctSizeSimilarity=1;PctRecOverlap=0.9096;SizeDiff=0;StartDistance=-131;EndDistance=-131;GTMatch=0;TruScore=96;MatchId=1025.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:0:31:1:15:1/1:0:6:0:7:1/1:0:17:./.:21:204:.:1490:.
chr11	118677891	HG2_PB_SVrefine2Falcon2Bionano_6220	G	GTGGTGGCTCAGGCCTGCAATCCCAGCACTTTGGGAAGCCGAGGCAGGCAGATCACGATGTCAGGAGTCCAGGACTAGCCTGGCCGACATAGTGAACCCCCGTCTCTACTGAAAATACAAAAATTAGCCAGGAGTGGTGTCACGCACCTGTAGTCTCAGCTACTTGGGAGGCTGAGACAGGAGAATTGCTTGAGTCCGGGAGGCGGAGATTACAGTGAGCTGAGACCATGCCATTGTACTCCAGTCTGGGTGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAATAGCCGGGTGTAGTGTCAGGTGCCTATAATCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATCACTTGAACCTGGGAGGTGGAGTTTGCAGTGAGCCAACATCTTGCCACTTCTCTCCAGCCTGGGCGAAACAGCGAAACTCCATCTCAAAAAAAAAAAAAGAATCTTGGCTGAGTAGAGAAGGAGAAAAATAAGGTGATCTTGAGAAGCAAGGATAGGGTTGACAATTTTTTTTTTATTTATTCTTTTGAGACGGAGTCTCACTCTTGTTGCCCAGGCTGGAGCGCAGTGGTGCAATCTCGGCTCCCTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCACCAAGCCTGGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGATCGAATTCCTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGAAATTAGAGATGTGAGCCACCGCGCCCAGCCAGCAATTATTTTAAGGTGTAAAAGGTTAGAGCATGTTTATGTGTTCAAAATAGTATTATTTTTTTAAAAAATGTAAAACGACTAAATACTTACGAGGAAGTGATTTTTCTGTATTTCTGTAGAGCATGCGCTGTTGCATTTCAGCTCCTCACTTAGTGCCTGGCTTTTCAGTAAAAGTGTGTGTTGAATGAATTATCAACAGATTACACTGAGCAGGATGGTGTGAAAGTGGAGAGGCTTGCAGGGAAGGGAGAAGGGCAGAGGTGCAGGCTTGCCATTTAAAACGCAGGACTCCTGCCAGGGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2151:HG2_PB_pbsv_12697:HG3_PB_pbsv_12388:HG3_PB_HySA_19186:HG2_PB_SVrefine2PB10Xhap12_9145:HG2_Ill_SVrefine2DISCOVARplusDovetail_2422:HG4_PB_HySA_18493:HG4_PB_pbsv_12688:HG2_Ill_SVrefine2DISCOVARplusDovetail_2421:HG2_10X_SVrefine210Xhap12_8887:HG4_PB_SVrefine2PBcRDovetail_6428:HG4_PB_SVrefine2Falcon1Dovetail_7761:HG3_PB_SVrefine2Falcon1Dovetail_7723:HG2_PB_SVrefine2PBcRplusDovetail_2057:HG2_PB_SVrefine2PB10Xhap12_9144:HG2_PB_SVrefine2Falcon2Bionano_6220;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6220:HG2_PB_SVrefine2PB10Xhap12_9144:HG2_PB_SVrefine2PBcRplusDovetail_2057;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0594828;ClusterMaxSizeDiff=0.0586207;ClusterMaxEditDist=0.201274;PBcalls=13;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=1129;DistBack=4731;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=288;REFWIDENED=11:118677892-118678179;PctSeqSimilarity=0.9732;PctSizeSimilarity=0.9982;PctRecOverlap=0.7622;SizeDiff=-2;StartDistance=-268;EndDistance=-268;GTMatch=0;TruScore=91;MatchId=1026.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:0:5:1:16:./.:0:3:0:11:1/1:0:20:0/1:23:154:.:1120:.
chr11	119124249	HG2_PB_SVrefine2Falcon2Bionano_6221	A	ACCTGTAATCCCAGCACATTGGGAGGCCAAGGCTGGAGGATTGTCTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAGCAAGACCTCATTGCTACTAATAATAAAAAAGGCCGGGTGTGGTGGCTCACGCCTGTAACCCCAGCGCTTTGGGAGGCCGAGACAGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAATTAGCTGGGTGTGGTGGTGCATG	20	PASS	ClusterIDs=HG2_Ill_Spiral_869:HG2_PB_pbsv_12699:HG3_PB_pbsv_12390:HG4_PB_pbsv_12690:HG2_PB_PB10Xdip_4968:HG4_PB_HySA_18496:HG4_PB_SVrefine2Falcon1Dovetail_7763:HG4_PB_SVrefine2PBcRDovetail_6429:HG4_Ill_manta_3004:HG4_Ill_MetaSV_943:HG4_Ill_GATKHCSBGrefine_8775:HG3_PB_SVrefine2PBcRDovetail_5983:HG3_PB_SVrefine2Falcon1Dovetail_7724:HG3_Ill_manta_2891:HG3_Ill_SVrefine2DISCOVARDovetail_9285:HG3_Ill_MetaSV_981:HG3_Ill_GATKHCSBGrefine_8426:HG2_PB_SVrefine2PBcRplusDovetail_2058:HG2_PB_SVrefine2PB10Xhap12_9146:HG2_PB_SVrefine2Falcon2Bionano_6221:HG2_PB_SVrefine2Falcon1plusDovetail_2153:HG2_Ill_SVrefine2DISCOVARplusDovetail_2423:HG2_Ill_MetaSV_897:HG2_Ill_GATKHCSBGrefine_8526:HG2_10X_SVrefine210Xhap12_8889:HG2_PB_HySA_23118:HG3_Ill_Spiral_13249;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8889:HG2_Ill_GATKHCSBGrefine_8526:HG2_Ill_MetaSV_897:HG2_Ill_SVrefine2DISCOVARplusDovetail_2423:HG2_PB_SVrefine2Falcon1plusDovetail_2153:HG2_PB_SVrefine2Falcon2Bionano_6221:HG2_PB_SVrefine2PB10Xhap12_9146:HG2_PB_SVrefine2PBcRplusDovetail_2058:HG3_Ill_GATKHCSBGrefine_8426:HG3_Ill_MetaSV_981:HG3_Ill_SVrefine2DISCOVARDovetail_9285:HG3_Ill_manta_2891:HG3_PB_SVrefine2Falcon1Dovetail_7724:HG3_PB_SVrefine2PBcRDovetail_5983:HG4_Ill_GATKHCSBGrefine_8775:HG4_Ill_MetaSV_943:HG4_Ill_manta_3004:HG4_PB_SVrefine2PBcRDovetail_6429;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0442804;ClusterMaxSizeDiff=0.0369004;ClusterMaxEditDist=0.196007;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=266;DistBack=33689;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=11:119124250-119124291;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1027.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:28:1:32:1/1:0:10:0:11:1/1:0:21:./.:.:.:.:.:.
chr11	119222186	HG2_PB_SVrefine2Falcon2Bionano_6222	A	ATCCCCTCCCCCTCTCTCCTCCCTCCCCTCCTCTCTCCTCCTCTGTCCCCCTCCCCCCCTCCCTCCCTCCTCTCTCCTCCTCTGTCCTCCTCCCTCCCTCCCCTCCTCTCTCTCTCCCTTCCCTCCTCCTCTCTCCTCCCCTCCCTCCCTCCTCTCTCCCCTCCTCCCCTCCCCTCCTCTCCCTCCCCTCCCTCCCCTCCTCTCTCCTCCCCTCCTCCCCTCCTCTCTCTCCTCCCTCCTCTTCTCCCTCCTCCCCTCTCCCCCCCCTCCCTCCTCTCTCCTCCCTCCCCTCCCCTCCTCTTCCCCCCCTCTCCTCTCTCCTCCCTCTCCCCTCCCCTCCCCCTCTCCTCCCTCCCCTCCTCCTCCCTCCCTCCTCCCCTCCTCTCTCCTCCCCTCCCTCCCCTCTCTCCCCGCTCCGTCCCTCTCCTCCCTCCTCCCCTCCTTCCCCTCCCTCCTCCTCTCCTCCCTCCCTCTCCTCCCCTCTCCTCCCTCCTCTCTCCTCTCCCTCCCCTCTCTCCTCCGCTCCCCTCCCCTCTCCTCTGCTCCTCTCCCCTCCCTTCCTCTCCTCCTCCTCTCTCCTCCCTCCCTCTCTCGCTCCTCTCCCCTCTTCCCTCTCCTCTCCCTCTCTCTCTTCCCCTCCGCTCCCTCCCCTCTCTCTCCGCTCCTCTCCCCTCCCTTCCCTCCCTCCCCTCTCTCTCCCCTCCCTCTCCTCTGCTCCTCTCCCCTCCCTTCCTCTCCTCCCCTCCCTCTCCCCCTCCTCTCCTCCGCTCCCTCCCTCTCCTCCACTCCTCTCCCCTCCCTCCTCTCTCCTCCACTCCTCTCCCTCCCTCTCCTCTTCCTCCCCTCCCTCTCCCCTCCCCACCCCTCCCTCCCCCTTTCTCCTCCCTCCCACGGC	10	PASS	ClusterIDs=HG4_PB_pbsv_12691:HG2_PB_HySA_23120:HG2_PB_pbsv_12700:HG2_PB_SVrefine2Falcon1plusDovetail_2154:HG2_PB_assemblyticsfalcon_4910:HG2_PB_HySA_23121:HG2_PB_SVrefine2Falcon1plusDovetail_2155:HG2_PB_assemblyticsfalcon_4911:HG3_PB_SVrefine2PBcRDovetail_5984:HG3_PB_pbsv_12391:HG3_PB_SVrefine2Falcon1Dovetail_7725:HG2_PB_SVrefine2Falcon2Bionano_6222:HG2_PB_SVrefine2PB10Xhap12_9147;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6222;NumExactMatchSVs=1;ClusterMaxShiftDist=0.364162;ClusterMaxSizeDiff=0.364162;ClusterMaxEditDist=0.382937;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=894;DistBack=19969;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=11:119222187-119222228;PctSeqSimilarity=0.928;PctSizeSimilarity=0.886;PctRecOverlap=0.887;SizeDiff=-115;StartDistance=-34;EndDistance=-34;GTMatch=1;TruScore=90;MatchId=1028.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:1:22:0:16:./.:1:3:1:2:0/1:5:3:0/1:13:43:.:1144:.
chr11	119809117	HG2_PB_SVrefine2PB10Xhap12_9154	T	TTCTCTCTCTTGTCTCTCCCCCACCCCTCTCTCTCTCTCATCTCTTCCCCACCCCCCTCTCTCTTGTCTCTCCCCCACCCCTCTCTCTCTCATCTCTACCCCACCCCCTCTCTCTCTTATCTCTTCCCCACCCCTCTCTCTCTCTCTCTCATCTCTCCCCCACCGCTCTCTCTCTCGTCTCTCCCCCACCCCTCTCTCTCTCATCTCTTCCCCACCCCTCTCTCTCTCGTCTCTCCCCCACCCCTCTCTCTCTCATCTCTTCCCCACCCCTCTCTCTCTCTCTCATCTCTCCCCTACCCCTCTCTCTCTCTCCTCTCTCCCTCATCCCTCTCTCTCTCTCTCATCTCTTCCCCACCCCCTCTCTCTCATCTCTCCCCACCCCTCTCTCTCTCTCGTCTCTACCCCACCCCTCTCTCTCTCGTCTCTTCCCCACCCCTCTCTCTCTCGTCTGTCCCCCACCCCTCTCTCTCCTCTCTCGTCTCTACCCCACCCCTCTCTCTCTCGTCTCTTCCCCACCCCTCTCTCTCTCGTCTGTCCCCCACCCCTCTCTCTCCTCTCTCGACTCTACCCCACCCCTCTCTCTCTCTCGTCTCTTCCCCACCCCTCTCTCTCTCTCTCGTCTCTCCCCCACCCCTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_4989:HG3_PB_HySA_19195:HG2_PB_pbsv_12706:HG3_PB_pbsv_12395:HG2_PB_HySA_23126:HG3_PB_assemblyticsfalcon_4945:HG4_PB_assemblyticsfalcon_4816:HG2_PB_assemblyticsfalcon_4916:HG3_PB_HySA_19194:HG4_PB_SVrefine2Falcon1Dovetail_7767:HG2_Ill_breakscan11_4334:HG2_PB_SVrefine2Falcon1plusDovetail_2159:HG3_PB_SVrefine2PBcRDovetail_5987:HG2_PB_SVrefine2PBcRplusDovetail_2063:HG2_PB_SVrefine2PB10Xhap12_9154:HG2_PB_SVrefine2Falcon2Bionano_6226:HG4_PB_SVrefine2PBcRDovetail_6433:HG3_PB_SVrefine2Falcon1Dovetail_7729;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9154:HG2_PB_SVrefine2PBcRplusDovetail_2063;NumExactMatchSVs=2;ClusterMaxShiftDist=0.22716;ClusterMaxSizeDiff=0.22716;ClusterMaxEditDist=0.275;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=635;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=37;REFWIDENED=11:119809118-119809154;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9969;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1029.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:20:0:14:1/1:0:17:0:18:1/1:0:17:./.:4:38:.:.:.
chr11	119932659	HG2_PB_pbsv_12707	T	TACTAAAAGGCCACTTCGCTGAGCTTGGTGGAAGGAGGGCACAGAAGGTCGGTCCGCAGGCAGTACACCACAGACAGCTCTCTGCACGTTCCAGCCAACCTCAGCTCTGCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8892:HG4_PB_pbsv_12699:HG2_PB_HySA_23128:HG2_PB_pbsv_12707:HG2_Ill_breakscan11_4335;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_12707;NumExactMatchSVs=1;ClusterMaxShiftDist=0.102326;ClusterMaxSizeDiff=0.102326;ClusterMaxEditDist=0.225225;PBcalls=3;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=110;DistBack=366;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=11:119932660-119932659;PctSeqSimilarity=0.9174;PctSizeSimilarity=0.9821;PctRecOverlap=0.9646;SizeDiff=-2;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=95;MatchId=1030.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:25:./.:6:13:18:1:1|0:0:10:22:0:0/1:34:15:./.:.:.:.:.:.
chr11	120138320	HG2_PB_SVrefine2PBcRplusDovetail_2065	T	TTGTTTAGGACACAGCTGAGGAAAAGGGGTTAAAGCTCCAGGGAATTCTCTTAGACCCCATTCATTCATCTCTCAGGTGTTTCTTGAGCCTCTTATCCATGTTAGGAACTGTGGTCATTTTGTGGCCACTGAGGACAAAAAAAAAATGGGTGTCACTGTCCAGCTCTCAAGGAATTCATAGACTAGCAGAAGAGGGAAACATACAAAGAGGGAGTGACACAATGAGTGCCACGCAACCAGCAGAGAGGCCTCCCGGATTCCAGAGGGGAGAGGGACTAACTCCATGCGAGGGAGCAGTGCACGGAGGCACGGTAACGTGAGCGTGTGTGTTAGGATGCAAGTGAGTACTTTGTGTGGCTGGAGCTCAGGGTACCTGGGAGAAAAAGTAAGGTAGGATTGTGAGTGGCATAAGAGCAGAAAAGGTAGGCAGGAGACAGGACATGTGGGGAATTCCATGTTGTGTCAAGGAATCTGACTTTATTCCAAAGCTATTTTGAGAGTTTTGAATTTGTTTACTCATGCATTCAACCAATGTATTTTGAGCTCCTACTATATATATATATATGTGTATATATATATATGTATATATATATATATTATATATGCATATTA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4336:HG4_PB_pbsv_12704:HG4_PB_HySA_18512:HG2_PB_pbsv_12709:HG2_Ill_breakscan11_4337:HG3_PB_pbsv_12397:HG2_Ill_MetaSV_900:HG2_PB_PB10Xdip_4995:HG2_PB_HySA_23130:HG3_PB_HySA_19202:HG4_PB_SVrefine2Falcon1Dovetail_7770:HG3_PB_SVrefine2Falcon1Dovetail_7732:HG4_Ill_SVrefine2DISCOVARDovetail_9057:HG3_PB_SVrefine2PBcRDovetail_5988:HG2_PB_SVrefine2PBcRplusDovetail_2065:HG2_PB_SVrefine2PB10Xhap12_9156:HG2_PB_SVrefine2Falcon2Bionano_6227:HG2_PB_SVrefine2Falcon1plusDovetail_2162:HG2_Ill_SVrefine2DISCOVARplusDovetail_2425:HG3_Ill_SVrefine2DISCOVARDovetail_9286:HG2_10X_SVrefine210Xhap12_8893;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2425:HG2_PB_SVrefine2Falcon1plusDovetail_2162:HG2_PB_SVrefine2Falcon2Bionano_6227:HG2_PB_SVrefine2PB10Xhap12_9156:HG2_PB_SVrefine2PBcRplusDovetail_2065:HG3_PB_SVrefine2PBcRDovetail_5988:HG4_Ill_SVrefine2DISCOVARDovetail_9057;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0467742;ClusterMaxSizeDiff=0.0451613;ClusterMaxEditDist=0.27685;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=611;DistBack=2211;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=178;REFWIDENED=11:120138321-120138498;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=0.9967;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1031.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:34:0:9:1/1:0:29:0:21:1/1:0:38:1/1:3:85:.:.:.
chr11	120199305	HG4_PB_SVrefine2Falcon1Dovetail_7771	C	CTGTGTGTGTGTGTGTGTATGTGTGTGTGTTTGTATATGTATGCATATCTGTGTCCTAATCCCTTCTAAGGATAACAGTCATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTATGTATGCATACCTGTGTCCTAATCCTTGTAAGGATAACAGTCATATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTATGTGTTTGTATATGTATGCATATCTGTGTCCTAATCCCTTCTAAGGATAACAGTCATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTATGTATGCATATCTGTGTCCTAATCCCTTCTAAGGATAACAGTCATATTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTGTATATGTATGCGTATCTGTGTCCTAATCCCTTCTAAGGATAACAGTCATATTGTGTGTGTGTGTGTGTGTGTGCGTGTATGTGTTTGTATATGTATGCATATCTGTGTCCTAATCCCTTCTAAGGATAACAGTCATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTATGTATGCATATCTGTGTCCTAATCCCTTCTAAGGATAACAGTCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTTTGTATATGTATGCGTATCTGTGTCCTAATCCCTTCTAAGGATAACAGTCATATTGTGTGTGTGTGTGTGTATGTGTATGTGTTTGTATATGTATGCATATCTGTGTCCTAATCCCTTCTAAGGATAACAGTCATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTATGTATGCATACCTGTGTCCTAATCCCTTGTAAGGATAACAGTCATTTTGTGTGTGTGTGTGTGTGCGTGTATGTTTGTATATGTATGCATATCTGTGTCCTAATCCCTTCTAAGGATAACAGTCATAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6228:HG4_PB_pbsv_12706:HG2_PB_HySA_23133:HG4_PB_HySA_18514:HG4_PB_SVrefine2Falcon1Dovetail_7771:HG3_PB_SVrefine2Falcon1Dovetail_7733:HG2_PB_SVrefine2Falcon1plusDovetail_2163:HG4_PB_SVrefine2PBcRDovetail_6435:HG3_PB_pbsv_12398:HG3_PB_SVrefine2PBcRDovetail_5989:HG2_PB_SVrefine2PB10Xhap12_9157:HG2_PB_SVrefine2PBcRplusDovetail_2066;NumClusterSVs=12;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_7771;NumExactMatchSVs=1;ClusterMaxShiftDist=0.07195;ClusterMaxSizeDiff=0.0688217;ClusterMaxEditDist=0.22732;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=939;DistBack=8052;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=193;REFWIDENED=11:120199306-120199498;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9916;PctRecOverlap=0.9071;SizeDiff=-8;StartDistance=-84;EndDistance=-84;GTMatch=1;TruScore=96;MatchId=1032.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:84:1/1:0:23:1:28:./.:3:82:6:83:./.:1:1:0/1:20:127:.:1008:.
chr11	120746822	HG2_PB_SVrefine2PB10Xhap12_9158	T	TCATCATCATCACCACCACCATCACTGTCATCATCACCACCACCACCATCATCATCACCACCCCCACCATCATCATCACCACTACAACCACCACCATCATCATCATCACCACCACCACGATTACTACCACCACCACCACCATTACCACCACCATCACCACCACCACTACCACCATCATCACCACCACCACAACCACAAAACCACTACCACCATTATCACTACCACCACTATCACCACCACCACCCTCATCACTACCACTACCATCACCACCACCACCATCATCATCATCACCACCACCACTATCACCACCATCACACCACCACCACCATAATCACCATCACCACCACCACCACCATAATCACCATCACCACCACCATCACCATGATCACCATCACCACCACCACCATAATCACCATCACCACCACCACCATAATCACCACCACCACCACCACCATCATCATCATCACCACCACCATCACCACCATCACACCACCACCACCACCACAATCACCATCACCACCACCACCATAACCACCACCACCACCACCATAATCACCATCACCACCACCACCACCACCATAACCACCACCACCACCATAATCACCATCACCACCACCACCATCATCATCATCACCACCACCACCATCACCACCACCACCACCATCATCATCACCACCACCACCACCATCACCACCACCAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2165:HG2_PB_pbsv_12711:HG2_PB_PB10Xdip_5000:HG3_PB_pbsv_12399:HG2_Ill_breakscan11_4338:HG2_PB_HySA_23137:HG3_PB_SVrefine2PBcRDovetail_5990:HG2_PB_SVrefine2PBcRplusDovetail_2067:HG2_PB_SVrefine2PB10Xhap12_9158:HG4_PB_SVrefine2PBcRDovetail_6436:HG4_PB_SVrefine2Falcon1Dovetail_7772:HG3_PB_SVrefine2Falcon1Dovetail_7734:HG2_PB_SVrefine2Falcon2Bionano_6230;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9158:HG2_PB_SVrefine2PBcRplusDovetail_2067;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0577872;ClusterMaxSizeDiff=0.0577872;ClusterMaxEditDist=0.233516;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=699;DistBack=10922;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=386;REFWIDENED=11:120746823-120747208;PctSeqSimilarity=0.9715;PctSizeSimilarity=0.9943;PctRecOverlap=0.623;SizeDiff=-4;StartDistance=-263;EndDistance=-263;GTMatch=0;TruScore=86;MatchId=1034.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:0:21:0:19:./.:2:34:1:28:./.:0:1:1/1:1:157:.:.:.
chr11	120985265	HG2_PB_SVrefine2Falcon2Bionano_6231	T	TCCACCCACCCATCTATCCAGCTACCCACCCACCCACCCACCCATCCACCCACCCATCCATCCACCTACCCACCCACCCATCCACCCACCCATCCATCCACCTACCCACCCGCCCATCCACCCACCCATCCGTCCACCTACCCACCCACCCATCCATTCACCCATCCGTCCACCTACCCACCCACCCACCCACCCATCCACCCACCCATCCATCCACCTACCCACCCACCCATCCATTCACCCATCCGTCCACCTAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2166:HG4_PB_SVrefine2Falcon1Dovetail_7773:HG4_PB_pbsv_12708:HG4_PB_SVrefine2PBcRDovetail_6437:HG2_PB_pbsv_12712:HG2_PB_SVrefine2Falcon2Bionano_6231:HG3_PB_SVrefine2Falcon1Dovetail_7735;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6231:HG4_PB_SVrefine2PBcRDovetail_6437;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0551181;ClusterMaxSizeDiff=0.0504854;ClusterMaxEditDist=0.226488;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=256;DistBack=-703;DistForward=-1;DistMin=-703;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=703;REFWIDENED=11:120985266-120985968;PctSeqSimilarity=0.9837;PctSizeSimilarity=1;PctRecOverlap=0.6848;SizeDiff=0;StartDistance=-81;EndDistance=-81;GTMatch=0;TruScore=88;MatchId=1035.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:17:0|1:25:1:1:15:./.:2:16:1:4:./.:1:4:./.:.:.:.:.:.
chr11	121032229	HG2_PB_SVrefine2PB10Xhap12_9159	T	TCCCTCCCTCCTTCCCTCCCTCCTTCCCTTCCCTTCCCTTCCCTTCCCTCCCCTCCCCTCCCCTCCCCCACTCCCCCTTCCCGTCCTCCTCCCCCCTCCCCTCCCTTCCCCTCCTTTCCCCTC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7736:HG3_PB_pbsv_12400:HG4_PB_SVrefine2Falcon1Dovetail_7774:HG4_PB_HySA_18517:HG2_PB_HySA_23141:HG2_PB_pbsv_12713:HG2_PB_PB10Xdip_5074:HG2_PB_HySA_23140:HG3_PB_HySA_19210:HG4_PB_assemblyticsfalcon_4830:HG4_PB_pbsv_12709:HG2_PB_SVrefine2Falcon1plusDovetail_2167:HG4_PB_SVrefine2PBcRDovetail_6438:HG2_PB_SVrefine2Falcon2Bionano_6232:HG3_PB_SVrefine2PBcRDovetail_5991:HG2_PB_SVrefine2PBcRplusDovetail_2068:HG2_PB_SVrefine2PB10Xhap12_9159;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9159:HG2_PB_SVrefine2PBcRplusDovetail_2068:HG3_PB_SVrefine2PBcRDovetail_5991;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0883534;ClusterMaxSizeDiff=0.0722892;ClusterMaxEditDist=0.257261;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=122;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=11:121032230-121032282;PctSeqSimilarity=0.9588;PctSizeSimilarity=0.9531;PctRecOverlap=0.6357;SizeDiff=-6;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=84;MatchId=1036.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:72:1/1:1:25:2:51:./.:1:4:0:11:1/1:0:10:./.:.:.:.:.:.
chr11	121199947	HG2_PB_SVrefine2Falcon1plusDovetail_2170	T	TCACACACACACACACCACACACCACCCCCCCACACACACCATACACACCACACACACCACACACACACCACCCACACACACCACACACACACCCGACACCACACACACACCACACATACACCACACACACCACACACACACCCCACACACACCATACACACCACACACACACACCACACACGCCACACACGCCACACACACACCACACCACACACACACACACCACACACCACACCCCACACACACACATCACCCCCACACACCACACACCAAACACCCACACACACATCCACACACACCCCATATACACACCACACACACCACACACACTACACACACTACACACACCACACACACCACACACATACACACACACCACACACCATACACACACACATCCCCCCACACCACACCCCCACACACACAACACACACACACACACCACAACACACCCACACACAACCACACACACCACACACACACACACACACCACACACACACCACACACCCACCACACCACACACGCTGCACACGCCACACCCACACCCACACACACCACTCACACCACACACCACACACACACCCACACACACACCACACACACCACACATACCACACACACCACACACACACACACACCACCACACACACCACACACGCTGCACACGCCACACACACGCCACACCCACCCCACACACACCACCCACACCGCACACACCACACACACTACACACACACCCACACACCACACACCACACACACCACCCACACACACACACACCACACACACCACACACCACACACCACCACACACACCACACACACACACACACACCGCACACACCACACACACACACACCGACACACACATCACCCACACACCCACACACCCACCACACACACCATCCACACACACCGCATATACACACCACACACACCACACACACCATACACTACACACGCCATACACACCACACACATACACACACACCACACACACCACACACACACACACCCCACAACACACATCCCCCCCACACACACATCCCCCACACACACACCACACACACACACCCATACACACCACACCACACCCACAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6234:HG4_PB_HySA_18520:HG4_PB_assemblyticsfalcon_4834:HG3_PB_HySA_19212:HG2_PB_HySA_23146:HG3_PB_pbsv_12402:HG2_PB_SVrefine2Falcon1plusDovetail_2170:HG2_PB_pbsv_12714:HG2_PB_assemblyticsPBcR_4806:HG3_PB_assemblyticsfalcon_4964:HG2_PB_SVrefine2PB10Xhap12_9162:HG2_PB_SVrefine2PBcRplusDovetail_2070:HG4_PB_SVrefine2PBcRDovetail_6439:HG4_PB_SVrefine2Falcon1Dovetail_7776:HG3_PB_SVrefine2Falcon1Dovetail_7739:HG3_PB_SVrefine2PBcRDovetail_5993;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2170;NumExactMatchSVs=1;ClusterMaxShiftDist=0.21982;ClusterMaxSizeDiff=0.21982;ClusterMaxEditDist=0.266855;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1101;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=11:121199948-121200000;PctSeqSimilarity=0.9805;PctSizeSimilarity=0.9658;PctRecOverlap=0.9649;SizeDiff=-39;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=97;MatchId=1037.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:31:1/1:1:20:0:11:./.:2:15:12:18:./.:0:7:1/1:8:198:.:1064:.
chr11	121351459	HG2_PB_SVrefine2Falcon2Bionano_6235	A	AGCTCCATCTCCTCCTCCCCAGCTCCTCCCCTAGTGCACAGATACCAATAAGCAAGCTCCATCTCCTCCTCCCCAGCTCCTCCCCTAGTGCACAGATACCTATCGGCAGGCTCCATCTCCTCCTCCCCAGCTCCTCCCCTAGTGCACAGATACCTATAGGCAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7777:HG3_PB_HySA_19214:HG2_PB_SVrefine2PB10Xhap12_9163:HG2_PB_SVrefine2Falcon2Bionano_6235:HG2_PB_PB10Xdip_5088:HG4_PB_pbsv_12712:HG2_PB_HySA_23147:HG2_PB_pbsv_12715:HG3_PB_SVrefine2Falcon1Dovetail_7740:HG4_PB_SVrefine2PBcRDovetail_6440:HG2_PB_SVrefine2PBcRplusDovetail_2071;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6235:HG2_PB_SVrefine2PB10Xhap12_9163;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0729483;ClusterMaxSizeDiff=0.0668693;ClusterMaxEditDist=0.246154;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=162;DistBack=-1280;DistForward=38;DistMin=-1280;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1503;REFWIDENED=11:121351244-121352746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1038.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:42:./.:0:1:0:0:./.:5:3:4:4:./.:2:3:./.:.:.:.:.:.
chr11	122707245	HG2_Ill_GATKHCSBGrefine_8535	T	TCTCAGCTGATCCTGATCCCTTGGGGAGCTTCAGAGTTGCTCCACCTCAAGGCAAGGGAAAAGGACCTTGAGACCCCC	20	PASS	ClusterIDs=HG2_PB_HySA_23161:HG2_PB_pbsv_12722:HG4_PB_HySA_18536:HG3_PB_HySA_19225:HG4_PB_pbsv_12718:HG2_PB_HySA_23162:HG4_Ill_svaba_15922:HG3_PB_pbsv_12406:HG4_Ill_GATKHC_20427:HG4_Ill_GATKHCSBGrefine_8785:HG4_Ill_250bpfermikitraw_16865:HG3_PB_SVrefine2PBcRDovetail_5995:HG3_PB_SVrefine2Falcon1Dovetail_7744:HG3_Ill_svaba_16018:HG3_Ill_Krunchall_17002:HG3_Ill_GATKHC_20293:HG3_Ill_GATKHCSBGrefine_8433:HG3_Ill_250bpfermikitraw_16532:HG2_PB_SVrefine2Falcon1plusDovetail_2174:HG2_Ill_svaba_15859:HG2_Ill_SVrefine2DISCOVARplusDovetail_2435:HG2_Ill_Krunchall_17343:HG2_Ill_GATKHC_20419:HG2_Ill_GATKHCSBGrefine_8535:HG2_Ill_250bpfermikitraw_16996:HG2_10X_SVrefine210Xhap12_8901;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8901:HG2_Ill_250bpfermikitraw_16996:HG2_Ill_GATKHCSBGrefine_8535:HG2_Ill_GATKHC_20419:HG2_Ill_Krunchall_17343:HG2_Ill_SVrefine2DISCOVARplusDovetail_2435:HG2_Ill_svaba_15859:HG2_PB_SVrefine2Falcon1plusDovetail_2174:HG3_Ill_250bpfermikitraw_16532:HG3_Ill_GATKHCSBGrefine_8433:HG3_Ill_GATKHC_20293:HG3_Ill_Krunchall_17002:HG3_Ill_svaba_16018:HG3_PB_SVrefine2Falcon1Dovetail_7744:HG3_PB_SVrefine2PBcRDovetail_5995:HG4_Ill_250bpfermikitraw_16865:HG4_Ill_GATKHCSBGrefine_8785:HG4_Ill_GATKHC_20427:HG4_Ill_svaba_15922;NumExactMatchSVs=19;ClusterMaxShiftDist=0.119205;ClusterMaxSizeDiff=0.0927152;ClusterMaxEditDist=0.341772;PBcalls=10;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=77;DistBack=-75;DistForward=22582;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=77;REFWIDENED=11:122707246-122707322;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1039.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:32:0|1:34:2:1:39:0|1:7:0:1:10:0/1:24:18:./.:.:.:.:.:.
chr11	122860357	HG2_PB_SVrefine2PBcRplusDovetail_2075	G	GTGGTGATGATGGTAGTAGTGGTGGTAGTGGTGGTGGTGGTGATGATGGTGGTGATGATGGTGATGGTGGTGATGGTGATGGTGGTGATTGTAGTGGTGGTGGTGGTGATTATGGTGATGGTGGTGGTGGCGGTGATGGTTGTGGTGATGGTGGTGGTGATGGTGGTGACGATGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTAGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGATTATGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGATGGTGGTGATGGTGTTGGTGGTGGTGATTATGGTGATGATAGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTGATTGTGGTGGTGGTGGTGATTATGGTGATGGTGGTGGTGATGGTGGGAATGGTAGTGATGGTGATGGTGGTGATGATGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTAGTGATGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGTGGTGGTGATGATGATGGTGATGGTGGTGATGGTGGTGCTGGTGGTGGTTGTGGTGATGGTGGTGGTGCTGGTGGTGGTGATGGTGATGGTGGTGGTGGTAATGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGATGATGGTATTCGTGGTGGTGATGGTGATGGTGGTGATGGTGGTGATGGTGATGGTGGTGATGATGGTGTTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGATGATGGTATTCGTGGTGGTGATGGTGATGGTGATGGTGGTGATGGTGATGGTGGTGATGATGGTGTTGGTGGTGGTGGTGGTGATGGTGATGGTGGTGGTGGTGGTGATGATGGTGTTGGTGGTGGTGCTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGATGGTGGTGGTGATGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7782:HG2_PB_pbsv_12723:HG2_PB_PB10Xdip_5104:HG2_PB_HySA_23165:HG2_PB_SVrefine2PB10Xhap12_9169:HG4_PB_pbsv_12719:HG3_PB_pbsv_12407:HG2_PB_assemblyticsPBcR_4817:HG2_PB_SVrefine2Falcon1plusDovetail_2175:HG3_PB_SVrefine2Falcon1Dovetail_7745:HG2_PB_SVrefine2Falcon2Bionano_6238:HG2_PB_SVrefine2PB10Xhap12_9168:HG2_PB_SVrefine2PBcRplusDovetail_2075:HG3_PB_SVrefine2PBcRDovetail_5996;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_2075;NumExactMatchSVs=1;ClusterMaxShiftDist=0.140956;ClusterMaxSizeDiff=0.140956;ClusterMaxEditDist=0.193486;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1017;DistBack=6125;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=204;REFWIDENED=11:122860358-122860561;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9971;PctRecOverlap=0.954;SizeDiff=-3;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=98;MatchId=1040.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:1/1:0:7:0:7:./.:2:21:1:19:./.:1:11:1/1:12:281:.:1038:.
chr11	123327826	HG2_PB_pbsv_12724	A	AAGAAAGAAGAAAGAAAGAAAGAAGAAGAAAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAGAAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAAGAGAAGAAAGAAAAGAAAGAAAAGAAAGAAAAGAAAGAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAGAAAGAAAG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_9071:HG2_PB_pbsv_12724:HG2_PB_HySA_23166:HG4_PB_pbsv_12722;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_12724;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0736544;ClusterMaxSizeDiff=0.0736544;ClusterMaxEditDist=0.171745;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=182;DistBack=42058;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=11:123327827-123327827;PctSeqSimilarity=0.9407;PctSizeSimilarity=0.9838;PctRecOverlap=0.9892;SizeDiff=-3;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=97;MatchId=1041.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:22:0|1:31:1:0:21:./.:1:8:14:0:0/1:20:7:./.:.:.:.:.:.
chr11	124894971	HG2_Ill_GATKHC_20445	A	AATATATATATGAATATATATGAATATATATATGAATATATATATGAATATATATGAATATATATATGAATATATATGAATATATATATGAATATATATATGAATATATATGAATATATATATGAATATATATATGAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_12735:HG3_PB_pbsv_12419:HG2_PB_SVrefine2PB10Xhap12_9178:HG3_Ill_GATKHC_20322:HG2_Ill_GATKHC_20445:HG2_Ill_GATKHCSBGrefine_8544:HG2_PB_SVrefine2PBcRplusDovetail_2083;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8544:HG2_Ill_GATKHC_20445:HG3_Ill_GATKHC_20322;NumExactMatchSVs=3;ClusterMaxShiftDist=0.103704;ClusterMaxSizeDiff=0.0945455;ClusterMaxEditDist=0.219081;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=138;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=194;REFWIDENED=11:124894896-124895089;PctSeqSimilarity=0.9823;PctSizeSimilarity=0.965;PctRecOverlap=0.972;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1042.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:34:0|1:25:3:6:28:./.:18:14:0:5:0/1:17:31:./.:.:.:.:.:.
chr11	126146203	HG4_PB_SVrefine2Falcon1Dovetail_7794	T	TGTGTGTGATGTGGTGTGTGTGTGTATGTATGGGTTGGGGGAGAGTGTGTATGTGTGTGTGTATGGGGTTGGGGAAGGTGTGTGTGTGTGTGTGTATGGGGTTGGGGAGAGTGTGTATGTGTGTGTGTATGGGTTGGGGAGGGGGTGTGTGTGTGGTGTGTGTGTACGGGGGGAAAGTGTATGTGTGTGTGTGTGTGTGTGTATGGGGTTGGGGAAGGTGTGTGTGTGTGTGTATGGGGTTGGGGAGAGTGTGTATGTGTGTATGGGGTTGGGGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGTTGGGGAGGGGTGTGTGTGTATGGGGTTGGGGAGGTGTGTGTATGGGGTTGAGGAGGGTGTGTGTGTATGGGGTCGGGGAGGGTGTGTGTGTGTGTATGGGGTTGGGGAGAGTGGGGGGTGTGTGTGTGTGTATGGGGTTGGGGAGAGTGGGGGTGTGTGTGTGTGTATGTGGGGTTGAGGAGGGTGTGTGTGTGGGGACAGGGTTGGGGAGGGTGTGTGTGTGTGGGGTTAGGGAGGGTGTGTATGGGGTTGGGGAGGGTGTGTGTGTGTATGGGTTGGGGAGGGTGTGTATGTGTGTATGGGGTTGGGAGGGTGTGTGGGGTTGGGGGGGTGTGTGTGTGTGTTTATGGGGTTGGGAGGGTGTGTGTGTGTGTGTGTATGGGGTTGGAGGGAGGGTGTGGGTGTGTGTGTGTATGGGGTTGGGAGGGTGTGTTGTAGGGGTTGGGAGGGTGTGTGTGTGTGGTATAGGGTTGGGAAGGGTGTGTGTGTGTGTATGGGGTTGGGGAGGGTGTGTGTGTGTATGGGGTTGGGGATGGTGTGTGTGTGTATGGGGTTGGGAGGGGTGTGTGTGTGTGTATGGGGTTGGGGAGGGGTGTGGTGTGTGTATGGGGTTGGGAGGTGTGTGTGTGTGTGTGTGTGGACGGGGTTGGGGAGGGTTGCCGGCCATGCTGTTCCTGCAGTTCATAACTGCATTAGGGTGGTGTGTGTGCTGGGTTGGGTAGTGTATGTGGGGGGTTGGGGAGGGGTGTGTGTGTGTGCATGTGTATGGGGTTGGGGAGGGGGTGTGTGTGTGTGTGTGCTGGGTTGGGGAAAGTGTATGTGGGGGGGTTGGGAGGGGGTGTGTGTGTGTGCTGGGTTGGGGAGAGTGTATGTGGGGGGTTGGGGAGGGTGTGTGTGTGTGTGTGCATGTGTATGGGGTTGGGGAGGGTGTGTGTGTGTGCTGGGTTGGGGAGAGTGTATGTGGGGGGGTTGGGGAGGGTGTGTGTGTGTGTGTGCATGTGTATGGGGTTGGGGAGGGTGTGTGTGTGTGTGTGCTGGGTTGGGGAGAGTGTATGTGGGGGGTTGGGGAGGGTTGTGTGTGTGTGTGCATGTGTATGGGGTTGGGGAGGTGTGTGTGTGTGGGGGACGGGGTTGGGGTGGGTGTGTGTGTGTATGGGGTTGGGGAGGTGTGTGTATGTATGGGGTTGGGAAGGTGTGTGTATGGTGTGTGTGTGTATGGATTGGGGAGGGGGTGTGTGTGTGTGTGTATGGGGTCAGGGAGGGTGTGTGTGTGGGACAGGGTTGGGGAGGGGTGTGGGTGTGGACAGGGTTGGGGAGGGTGTGTGTGTGTTGTGTGGTGTGTTGGGTGGGAGGGTGTGTGTGTGTATGGGGTTGGGAGGGTGTGTGTGTGTATGGGTTGGGGAGGGTGTGTGTGTGTGGGGACAGGGTTGGGGAGGGTGTGTGGGGGTGGGGGTGGACGGGGTTGGGGAGGGTGTGTGGGGGTCGGGGTGACGGGGTTGGGAGGGTGTGTGGGGTGGGGGTGGACGGGTTGGGGAGGGTGTGTGGGGGTGGGGTGGACGGGGTTGGGGAGGTGGTGTGGGGGTGGGAGGTGGACGGGGTTGGGGAGGGTGTGTGGGGTCGGGGTGGACGGGGTTGGGGAGGGTGTGTGGGGTGGGGGTGGACGGGTTGGGGAGGGTGTGTGGGGGTGCGGGGTAGACAGGGTTGGGGAGG	10	PASS	ClusterIDs=HG3_PB_pbsv_12426:HG2_PB_assemblyticsPBcR_4849:HG2_PB_pbsv_12744:HG3_PB_assemblyticsfalcon_5007:HG4_PB_assemblyticsfalcon_4879:HG2_PB_SVrefine2Falcon1plusDovetail_2190:HG2_PB_PB10Xdip_5135:HG3_PB_SVrefine2Falcon1Dovetail_7757:HG2_PB_SVrefine2PB10Xhap12_9187:HG2_PB_SVrefine2Falcon2Bionano_6252:HG3_PB_SVrefine2PBcRDovetail_6006:HG2_PB_SVrefine2PBcRplusDovetail_2090:HG4_PB_SVrefine2Falcon1Dovetail_7794:HG2_PB_HySA_23195:HG4_PB_pbsv_12737;NumClusterSVs=15;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_7794;NumExactMatchSVs=1;ClusterMaxShiftDist=0.074056;ClusterMaxSizeDiff=0.0735688;ClusterMaxEditDist=0.258325;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=2019;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=11:126146204-126146210;PctSeqSimilarity=0.959;PctSizeSimilarity=0.9931;PctRecOverlap=0.9931;SizeDiff=14;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=98;MatchId=1043.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:0:12:1:15:./.:2:16:9:16:./.:0:6:1/1:4:128:.:2110:.
chr11	126502581	HG2_10X_SVrefine210Xhap12_8918	G	GCCACAAGCCTCCTTCCCTGTGCAGCTGCTTTTCTGTCCTGCCCAAGAGCAGCCCTGGGGAGGGGGCAATTGAGTGAGGGACTGCGAATGCCAGAAAACATGGGTGAGAAGCATGTCCGCACCTCCCACCCAACCTGGTGGGAATCCTGTAAAGCCTGCCTGAACTCTTGTTCATATCGTTGCTGCATACTGGGCATTGGGAGATAAAAATTGATGAGGAGACATTAGTATACTTGTTACAGCAGTGGCTAATATGCAGTGGAGGAGGCTTGTGGGGAGAGAGAGAGAGAGAGAGAAAAGAAGAAGAAAAAGAAAGGAAAGGAAAGGAAAGGAAGGAAAGGAAGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGGAAGGAAAGGAAGGAACGGTAGCGGCTATCCAAGGTGCGGACAACAGCCCTTATAGCCCTTATGCAGCTCAGATGCCCACTCCATGACAGGTATGCGACCTGGGCATGCATTCTCTGCAGGGAGACAATTACTGTTGCTGTGTGTGACAGGGTTGATACATCCTGCTGAAGGTAGGCATCTCTGTGTTTCCTTATTTTGTAATCCTTTCAAGCCTTCTGAATCCAGCCTCTGTCTCCAGCTGTCCAGTTCTGGACAAGCCTGCTACTCAGTGGAACCCCTCGTTTCTACCCCCAGGTGGTCTAGGCACTGAGGCTACAGAGGGCTATAAGGGCTGTTGTCCGCACCTTGGATAGCCGCTACCGTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTTCCTTCCTTTCCTTTCCTTTCCTTTCTTTTTCTTCTTCTTTTCTCTCTCTCTCTCTCTCTCC	20	PASS	ClusterIDs=HG3_Ill_MetaSV_991:HG2_PB_pbsv_12747:HG4_PB_pbsv_12739:HG3_PB_pbsv_12429:HG4_PB_HySA_18558:HG2_PB_assemblyticsPBcR_4854:HG3_PB_assemblyticsfalcon_5012:HG4_PB_assemblyticsfalcon_4883:HG2_PB_PB10Xdip_5138:HG3_Ill_GATKHCSBGrefine_8444:HG2_Ill_GATKHCSBGrefine_8546:HG2_PB_SVrefine2PB10Xhap12_9189:HG2_PB_SVrefine2PBcRplusDovetail_2091:HG3_Ill_SVrefine2DISCOVARDovetail_9318:HG3_PB_SVrefine2PBcRDovetail_6009:HG2_PB_SVrefine2Falcon1plusDovetail_2192:HG4_Ill_SVrefine2DISCOVARDovetail_9091:HG4_PB_SVrefine2PBcRDovetail_6454:HG2_PB_SVrefine2Falcon2Bionano_6255:HG2_10X_SVrefine210Xhap12_8918:HG3_PB_SVrefine2Falcon1Dovetail_7759:HG4_PB_SVrefine2Falcon1Dovetail_7795:HG2_PB_HySA_23203;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8918:HG2_PB_SVrefine2Falcon2Bionano_6255;NumExactMatchSVs=2;ClusterMaxShiftDist=0.139738;ClusterMaxSizeDiff=0.139738;ClusterMaxEditDist=0.285875;PBcalls=17;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=887;DistBack=40484;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=11:126502582-126502594;PctSeqSimilarity=0.9994;PctSizeSimilarity=0.9989;PctRecOverlap=0.9978;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1045.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:104:1/1:0:24:0:28:1/1:1:25:1:30:./.:0:7:0/1:15:108:.:1208:.
chr11	126669033	HG3_Ill_SVrefine2DISCOVARDovetail_9321	C	CTGTGTGTGCATGTGCGTATCTGTATGTGTGTGTATGTGTGTACCTATGGGTATCTGTGTGTGTGCATGTGTGTATCTGTGTGTGTATCTGTGTATCTGTGTGTGGATGTGTGTATCTGTGTGCGTGTGCATGTACCTGTGTGTGCATGTGTGTATCTGTACGTGTGTGCATGTGTGTACCTATGTGTATCTGTGTGTGTGCATGTGTGTATCTCTGTATCTGTGTATCTGTGTGTGCATGCGTGTATCTGTGTGTGCGTCTATCTGTGTGTGTGCGTCTCTGTGTGCATGTGTGTATCTGTGTGCATGCATCTCTGTGTGCATGTGTGTACCTGTAGGCATGTGCATGTGTGTATGTGTGTGTGCATGTGTGTATCTCTGTGTGTGCATGTGTGTATCTGTGTGCATGTGTGTATCTCTGTGCATGTGCATGTGTATATCTGTATGTGTGCATGTGTGTATCACTGTGTGCATGTATGTGTCTGTGTGTGAATGTGTGTATCTGTGTATGTGCATGTAGCTGTGTGTGTGCATGTATCTGTGTGCATGTGGTATCTGTGTGTGCGCATGTGTATCTGCATATGTGTGTATCCATGTGCACATGTGTGTATCTGTGTGCATGTGCATGTGATGTGTGTATCTGTGTGTGCATATATCTGTGTGTGCATGTGTGTATCTGTGTGTGCATATGTGTATCTGCATATGTGCATGTATCTATGTGTGCATGTGTGTGTCTGTGTGTGCATGTGCATGTATCTGTGCATGTGCATGTATCTGTGCATGTGTGTATCTGTGTGCATGTGCACGTGGTATCTGGGTGTGTGCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7796:HG3_PB_pbsv_12430:HG4_PB_HySA_18561:HG3_Ill_MetaSV_992:HG4_Ill_MetaSV_953:HG3_Ill_GATKHCSBGrefine_8445:HG4_PB_pbsv_12740:HG4_PB_HySA_18559:HG2_PB_SVrefine2Falcon1plusDovetail_2193:HG2_PB_SVrefine2PBcRplusDovetail_2092:HG2_PB_SVrefine2Falcon2Bionano_6256:HG2_10X_SVrefine210Xhap12_8919:HG2_Ill_SVrefine2DISCOVARplusDovetail_2454:HG2_PB_SVrefine2PB10Xhap12_9190:HG3_PB_SVrefine2Falcon1Dovetail_7760:HG4_Ill_SVrefine2DISCOVARDovetail_9093:HG3_Ill_SVrefine2DISCOVARDovetail_9321:HG4_PB_SVrefine2PBcRDovetail_6455:HG3_PB_SVrefine2PBcRDovetail_6010;NumClusterSVs=19;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_9321:HG4_Ill_SVrefine2DISCOVARDovetail_9093;NumExactMatchSVs=2;ClusterMaxShiftDist=0.269165;ClusterMaxSizeDiff=0.269165;ClusterMaxEditDist=0.309353;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=825;DistBack=-353;DistForward=-1;DistMin=-353;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=353;REFWIDENED=11:126669034-126669386;PctSeqSimilarity=0.9661;PctSizeSimilarity=0.9798;PctRecOverlap=0.6145;SizeDiff=-17;StartDistance=-316;EndDistance=-316;GTMatch=1;TruScore=85;MatchId=1046.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:./.:1:5:0:3:./.:0:0:0:0:0/1:10:3:1/1:2:156:.:.:.
chr11	126903172	HG2_PB_SVrefine2PB10Xhap12_9191	T	TCATTGCTGAATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGCCGGACTGCGGACTGCAGTGGCGCATCTCGGCTCACTGCAAGCTCCGCTTCCCGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGCGCCGCCACCGCGCCGGCTAATTTTTGTATTTTAGTAGAGACGGAGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACTCATGATCCACCGCCTCGCTCCAAAGTGCTGGATTACAGGTGAGCCACCGCGCCGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4342:HG3_PB_pbsv_12431:HG2_PB_pbsv_12749:HG2_PB_PB10Xdip_5141:HG2_PB_SVrefine2Falcon1plusDovetail_2194:HG2_PB_SVrefine2PB10Xhap12_9191:HG2_PB_HySA_23209;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9191;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0972644;ClusterMaxSizeDiff=0.0911854;ClusterMaxEditDist=0.180758;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=58779;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=11:126903173-126903187;PctSeqSimilarity=0.9677;PctSizeSimilarity=0.9373;PctRecOverlap=0.9403;SizeDiff=-21;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=1047.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:25:./.:13:26:17:1:1|0:0:6:21:0:0/1:27:12:0/1:9:19:.:.:.
chr11	126941117	HG4_PB_pbsv_12741	T	TCCACTGCTATATTTCTTTTTATTTGTTTTTTTTTGTTTTGTTTTTTTTGGGAATCGGTAGTCCTGCTCTTGTCGGCCCAGGCTGGAGGTGCATAGTCGCCGCGCCGATCTCGCTCCACTCGCAAAGCTCCGGCCTCCCGGGTTCACGCCATTCCCTCCTGCCTTCAGCCTCGTATAGAGGAGGTGGGACTACAGGCCGCCCGCTACCCACGCCCCGCTAATTTTTTTTATTATGTATTTTTAGTAGAACGGTTGGAGTTGTCACCGATGTAGGGCCGAGGAGATGGTTCTGCGATCTCCTGATCCTCGTGATCCGGCCCGCCTCGGACCTCCCAAGTGCTGTGATTTACAGGCGTGAGCCACGCGCCCGGGCCCC	10	PASS	ClusterIDs=HG4_PB_pbsv_12741:HG2_PB_SVrefine2Falcon2Bionano_6257:HG3_PB_pbsv_12433:HG2_PB_pbsv_12750:HG2_PB_SVrefine2Falcon1plusDovetail_2195:HG4_PB_assemblyticsfalcon_4887:HG4_PB_SVrefine2Falcon1Dovetail_7797;NumClusterSVs=7;ExactMatchIDs=HG4_PB_pbsv_12741;NumExactMatchSVs=1;ClusterMaxShiftDist=0.207792;ClusterMaxSizeDiff=0.207792;ClusterMaxEditDist=0.27417;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=375;DistBack=25790;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=11:126941118-126941131;PctSeqSimilarity=0.9059;PctSizeSimilarity=0.8933;PctRecOverlap=0.8933;SizeDiff=40;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=89;MatchId=1048.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:22:./.:23:10:12:6:0|1:18:0:0:6:0/1:19:8:0/1:9:7:.:.:.
chr11	127997826	HG4_PB_assemblyticsfalcon_4900	TAGCAGTT	CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACGACAGGCGCCCCGCCACTACCCGGCTAATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGAATCTCCTGACCTCGTGATCGCCCGCCTCGGCCTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4343:HG2_PB_pbsv_12757:HG4_PB_pbsv_12745:HG3_PB_pbsv_12440:HG2_PB_HySA_23226:HG4_PB_assemblyticsfalcon_4900:HG2_PB_assemblyticsfalcon_4999:HG3_PB_assemblyticsfalcon_5028:HG2_PB_SVrefine2Falcon2Bionano_6260:HG4_PB_SVrefine2Falcon1Dovetail_7803:HG2_PB_SVrefine2PBcRplusDovetail_2097:HG2_PB_SVrefine2PB10Xhap12_9197:HG2_PB_SVrefine2Falcon1plusDovetail_2201:HG3_Ill_GATKHCSBGrefine_8449:HG3_Ill_MetaSV_995:HG3_PB_SVrefine2Falcon1Dovetail_7767:HG2_10X_SVrefine210Xhap12_8926:HG4_PB_HySA_18569:HG2_PB_PB10Xdip_5152;NumClusterSVs=19;ExactMatchIDs=HG4_PB_assemblyticsfalcon_4900;NumExactMatchSVs=1;ClusterMaxShiftDist=0.121875;ClusterMaxSizeDiff=0.121875;ClusterMaxEditDist=0.222222;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=310;DistBack=3298;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:127997834-127997825;PctSeqSimilarity=0.9708;PctSizeSimilarity=0.9337;PctRecOverlap=0.955;SizeDiff=-22;StartDistance=0;EndDistance=7;GTMatch=0;TruScore=95;MatchId=1049.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:0:86:1/1:3:35:0:33:./.:4:6:4:4:0/1:12:16:0/1:7:31:.:.:.
chr11	128737982	HG2_PB_HySA_23235	A	ATAATATTATTATGTAATGTAATATAATATATTATTATGTAATGTAATATAATATATTATTATATAACATAATATAATATAATATAATATATTATATAACAAAATAATAATATAATATAATATATTATTATATAACATAATATAATGTAATATATTATTATATATAACATAATATAATACAATATAATATATTATTATATAACATAATATAATATAATATAATATAGTATATTATAATATAATATAGTATAATATAATATGATATATTATTATATAATATAATATAATATGTAATTATATATTATATTATATTATAATATAATATGTAATTATATTATATTATTATAATATAATATGTAATTATATTATATTATGATATATAATTATATTATAATAATAATATAATATATAATTATATATTATAATATAATATATAATTATATTATATTATATTATTATATTATAATATATCATTATATATTATAATGATATATTATATTATAATATATGATATATTATAATATAATATAAAATGATATATATATAATATAATATATATATAATATTATATTATATATATATAATAAAAATATATTATATTATATAATATTATATATATATATTATATTATATAGTATTATATAATATATTATATTATATAATATTATATAATATATATATATATATAATATATTATATAATACTATTATAATATATATTATATATACATTATATAATTATTATACAATATATTATTATATTATATATATTATATATATTATATATGTATATTATAAAAATATATTTATATATTATATAATATAATATATATAATATATTATATGTTATATATTATTATATATTGTATATAATATATTATATATTATATATTTTTATATATTATATATTATTATATATAATATATAATATATTATTATATATTATATATATTATATATATATAATATATTTGTATATTATATATTTTTATATATATATATATATTACTATATCTATTATATATAATATATGATATATTATATATAGTATATATATATATATTATATATATATAATATATTATATATTATACATATTATAGATAATATATATAATATATTATATATTATAGATAATATATATAATATATTATATATATATGTTATATAATATATTATATATTATACATATTATAGAATAATATATAAATATATTATATATATATACATAATATATATAATATATTATATATATATATATATATATATTATATATTATACATATAATATATAATATATTATATATTATATATAATATATTATATATATATTATGTATAATATATAATATAATTATATATATCTATATATATATATATATATTATATATAATATATATAATAATTATATATTATATATAATATATTACATATTATATATTATATATAATATATAATATATTATATATATAGTATATATAATATATATATATTATTATATATATTATATATATTATGTATTATATATATTATATTATATTATATATTATATATAGTATATATAATTATTATATCTTATATATATTATTATATATATATAATTATATATTTTATATAATATAATTATTATATATTATTATTAAAATATATTGTATATTATATGATATCATATAATTTATTATATTATATATATATATAACATATTATATATTACATTGTATAATATATAATATATAATATATATTACATTGTATAATATATTATATATAATATATTTTAATAATAATATATAATAATTATATTATATAAAATATATAATTATATTATATAATAATATATATAAGATATAATAATTATATATAATATATAATATATAATATATATTATATAATATATAATATAATATATAATATAATATATATATATAATATATTATATAATATATATTAATATAATATATATTATATAATATATATATAATATAATAATATTATATATATTAATATATATATATATAATATATAGTATAATATTGTATAATAAATATATAATATATAAATATAATATATTATATATATTATTATATTATATATTTTATATATATATAATATATTATATACAATATGTAATATATCATTTATAATATATTATATAATAATATATTATATATATAATATTATATATATGATAATATATTATATAATATATTATATGATAATATATTATATATATATATATTATATTATATTACATAATATATTATATAATAATATATTACATAATATATTATATAATAATATATTACATAATAATATTATATAATAATATATTACATAATATATTATATAATAATATATTACATAATGTATTATATAATAATATATTACATAATGTATTATATAATAATATATTATATATATTATATATATAATAATATATTATATTATATTACATAATGTATTATATAATATATTATATTATATTACATAATATATTATGTTATATATTATATTATATTACATAATATATATTATATTATATATTAGAATATAATACATAATGAAATAAGGAATATAATAGAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_12762:HG3_PB_pbsv_12442:HG2_PB_PB10Xdip_5155:HG4_PB_pbsv_12750:HG2_PB_SVrefine2PB10Xhap12_9201:HG3_PB_HySA_19284:HG4_PB_HySA_18576:HG2_PB_HySA_23235:HG2_Ill_breakscan11_4344:HG4_PB_assemblyticsfalcon_4906:HG3_PB_assemblyticsfalcon_5033:HG2_PB_assemblyticsfalcon_5004:HG2_PB_assemblyticsPBcR_4874:HG2_PB_SVrefine2Falcon2Bionano_6263:HG3_PB_SVrefine2Falcon1Dovetail_7771:HG4_PB_SVrefine2Falcon1Dovetail_7804:HG3_PB_SVrefine2PBcRDovetail_6014:HG2_PB_SVrefine2PBcRplusDovetail_2100:HG2_PB_SVrefine2Falcon1plusDovetail_2204;NumClusterSVs=19;ExactMatchIDs=HG2_PB_HySA_23235;NumExactMatchSVs=1;ClusterMaxShiftDist=0.204702;ClusterMaxSizeDiff=0.204702;ClusterMaxEditDist=0.277811;PBcalls=18;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=2577;DistBack=4040;DistForward=144;DistMin=144;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=190;REFWIDENED=11:128737972-128738161;PctSeqSimilarity=0.9709;PctSizeSimilarity=0.9461;PctRecOverlap=0.9464;SizeDiff=139;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=1051.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:84:1/1:4:19:0:7:./.:0:1:1:5:1/1:1:35:1/1:3:261:.:2387:.
chr11	129015279	HG2_PB_SVrefine2Falcon1plusDovetail_2206	AAAG	CCCTTCTTATATATATATATATATATAAACTGAATAAACGAGATTTTGATACAAAATTTGTGCTGTCAAGAAAGGCAAACAGGACTGCCAGTTTCCTGCAGTTTAACCATAAGAAACACACATAATGAATTTCTGAAATGACATGTTTTAGAAGATTTTACCATTGGTCTAAGTATTGTCCCCTTTCTTAAAAAGAACAGAGACAATGTAGGGGAAATCCAATAAGTAGTCCTCCTTTATCTGTTATTTCACTTTTCACAGTTTCAGTTACCCATGGTCAACCTCGGTCAAAAAATACTAAATGGAAAATTCCTGAAAAAAACAATGTATAAGTTTTAAACTGCATGCAGTTCTGAGTAATGTGATGAAATCTCACACAGTCCCGCACCGCCCCACTCCGTCCCGCCTGGAACATGAATCATTCCTTTGTCCAGTGCATCTACACTGTGGACTACCCGCCGGTGACTCACTTGGGAGTCATCTCAGTGACCAGACCAACTTTCATGGTATTGCAGTGCTTGTATTCAACTCACGCTTCTTTGACTTAATAATAGCGTCACAAACTAGATGTTTATTTTGAAACTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9203:HG2_PB_pbsv_12765:HG2_PB_SVrefine2PBcRplusDovetail_2102:HG2_PB_SVrefine2Falcon2Bionano_6265:HG2_PB_assemblyticsfalcon_5006:HG2_PB_SVrefine2Falcon1plusDovetail_2206:HG2_PB_PB10Xdip_5157:HG2_Ill_MetaSV_913;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2206:HG2_PB_assemblyticsfalcon_5006;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0911436;ClusterMaxSizeDiff=0.0911436;ClusterMaxEditDist=0.142734;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=581;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:129015283-129015278;PctSeqSimilarity=0.9949;PctSizeSimilarity=0.9966;PctRecOverlap=0.9914;SizeDiff=-2;StartDistance=3;EndDistance=6;GTMatch=0;TruScore=99;MatchId=1052.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:50:./.:26:14:5:13:1|0:0:41:28:0:0/1:30:21:0/1:11:28:.:.:.
chr11	130675910	HG2_PB_assemblyticsfalcon_5023	TAAAAAGAAGCAC	AGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGACCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGTGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAACGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGAGACAGAACGAGACTCCGTCTCAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_23267:HG4_PB_assemblyticsfalcon_4918:HG3_PB_pbsv_12452:HG3_PB_assemblyticsfalcon_5052:HG2_PB_assemblyticsfalcon_5023:HG3_PB_HySA_19300:HG2_PB_SVrefine2Falcon2Bionano_6272:HG3_PB_SVrefine2PBcRDovetail_6021:HG3_Ill_SVrefine2DISCOVARDovetail_9340:HG2_PB_SVrefine2Falcon1plusDovetail_2213:HG3_Ill_MetaSV_999:HG3_Ill_GATKHCSBGrefine_8454:HG2_Ill_breakscan11_4345:HG3_PB_SVrefine2Falcon1Dovetail_7779:HG2_PB_HySA_23268:HG4_PB_SVrefine2Falcon1Dovetail_7812:HG2_PB_pbsv_12775;NumClusterSVs=17;ExactMatchIDs=HG2_PB_assemblyticsfalcon_5023:HG3_PB_assemblyticsfalcon_5052;NumExactMatchSVs=2;ClusterMaxShiftDist=0.148387;ClusterMaxSizeDiff=0.148387;ClusterMaxEditDist=0.241206;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=280;DistBack=-1;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=11:130675923-130675909;PctSeqSimilarity=0.975;PctSizeSimilarity=0.9121;PctRecOverlap=0.9544;SizeDiff=-27;StartDistance=0;EndDistance=12;GTMatch=0;TruScore=94;MatchId=1053.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:1|0:7:29:12:2:./.:4:4:23:0:0/1:24:6:./.:.:.:.:.:.
chr11	131178167	HG2_10X_SVrefine210Xhap12_8940	A	AGCTGAGATTACAGGCATGTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAAACGAGGTTTCACCATGTTGACCAGGCTGGTCTGAAACTCCTAACCTCAAGTGATTTGCCCAGCTCGGCCTCCCAAAGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8940:HG3_PB_pbsv_12454:HG3_PB_HySA_19308:HG2_PB_pbsv_12777:HG2_PB_HySA_23275:HG4_PB_HySA_18593:HG4_Ill_svaba_16006:HG4_Ill_MetaSV_962:HG4_Ill_GATKHCSBGrefine_8814:HG3_Ill_svaba_16098:HG3_Ill_Spiral_13335:HG3_Ill_MetaSV_1000:HG3_Ill_GATKHCSBGrefine_8456:HG2_PB_SVrefine2Falcon1plusDovetail_2214:HG2_Ill_svaba_15943:HG2_Ill_MetaSV_915:HG2_Ill_GATKHCSBGrefine_8562:HG2_PB_assemblyticsfalcon_5031:HG2_PB_PB10Xdip_5170:HG2_Ill_breakscan11_4346:HG4_PB_SVrefine2PBcRDovetail_6464:HG4_PB_SVrefine2Falcon1Dovetail_7813:HG4_Ill_SVrefine2DISCOVARDovetail_9113:HG3_PB_SVrefine2PBcRDovetail_6022:HG3_PB_SVrefine2Falcon1Dovetail_7780:HG3_Ill_SVrefine2DISCOVARDovetail_9341:HG2_PB_SVrefine2PBcRplusDovetail_2110:HG2_PB_SVrefine2PB10Xhap12_9214:HG2_PB_SVrefine2Falcon2Bionano_6273:HG2_Ill_SVrefine2DISCOVARplusDovetail_2470;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8940:HG4_PB_SVrefine2PBcRDovetail_6464:HG4_PB_SVrefine2Falcon1Dovetail_7813:HG4_Ill_SVrefine2DISCOVARDovetail_9113:HG3_PB_SVrefine2PBcRDovetail_6022:HG3_PB_SVrefine2Falcon1Dovetail_7780:HG3_Ill_SVrefine2DISCOVARDovetail_9341:HG2_PB_SVrefine2PBcRplusDovetail_2110:HG2_PB_SVrefine2PB10Xhap12_9214:HG2_PB_SVrefine2Falcon2Bionano_6273:HG2_Ill_SVrefine2DISCOVARplusDovetail_2470;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0581818;ClusterMaxSizeDiff=0.0509091;ClusterMaxEditDist=0.180505;PBcalls=15;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=135;DistBack=22755;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=34;REFWIDENED=11:131178168-131178201;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=0.963;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=98;MatchId=1054.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:0:44:0:10:1/1:0:14:0:13:1/1:0:42:./.:.:.:.:.:.
chr11	131389144	HG2_PB_SVrefine2Falcon1plusDovetail_2216	A	AGAACCTGCTTGTTAGGGAGCTGTAGAGTTAGTTATGACCAGCCCAACTCTTCTTTACTTTCAGGTCTTCATAGGAGGCTGCATCTTTAGTTTTATTTCTGGGTTAGCACCTGAGAGGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6275:HG2_PB_pbsv_12779:HG4_PB_HySA_18594:HG4_PB_pbsv_12767:HG4_PB_SVrefine2Falcon1Dovetail_7817:HG2_PB_PB10Xdip_5174:HG3_PB_HySA_19311:HG2_PB_HySA_23279:HG4_PB_SVrefine2PBcRDovetail_6466:HG3_PB_SVrefine2Falcon1Dovetail_7782:HG2_PB_SVrefine2Falcon1plusDovetail_2216:HG2_PB_SVrefine2PBcRplusDovetail_2112:HG2_PB_SVrefine2PB10Xhap12_9216;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2216:HG3_PB_SVrefine2Falcon1Dovetail_7782:HG4_PB_SVrefine2PBcRDovetail_6466;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0823045;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.321285;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=118;DistBack=78413;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=827;REFWIDENED=11:131389145-131389971;PctSeqSimilarity=0.993;PctSizeSimilarity=1;PctRecOverlap=0.7983;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=93;MatchId=1055.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:83:1/1:11:36:0:42:./.:2:0:1:0:./.:13:2:./.:.:.:.:.:.
chr11	131995548	HG3_Ill_SVrefine2DISCOVARDovetail_9345	G	GTGGTGTGTGTGTCATGTGTAGTGCGTAGTGGGGTATGTGGTGTGAGTGTGGTGTGTAGTGTGTGGTGTGTGATGTGTGTGTGGTGATGGTGGGGTATGTGGTGTATGTGTTGTGTAGCATGGTGTGTGATGTGTGTGTGGTGTGTGGTGTGAGTGTGGTGTGTAGTGTGTGGTGTGTGATGTGTTTGTGGTGCGTGGTGGGGTATGTGGTGTATGTGTTGTATGGTGTGGTATGTGGTATGTGTGTGGTGTGTAGTGTGTGTTATGTGGTGTGTTGTGGGGTATGTGGTATGTCTAGTGATATGGTGTGTGTGGTGTGTGTGTGTTATGTGTGTGGTGTGGTATGAGGTGTAGTGTATTGTGTGGTGTGGTATGTGGTGTAGGTGTAGTATGGTGTGTGTGTGGTGGTGTGTGTGATGTATGTTGTATATGGTGTGTGTGGTGTGGTATATGTGGTGGGGCATGTGTGTGTTGTGGTGTGTGTTGTGTGTGTGGTGTGTGTGTGTGGTGTCTATAGTATGTGTGTTGTGAGTGTGTGGTGTGTGTGGTGGAGTGTGTGTTGTGTGGTATGTGGTGCATGTGTGTTGTGTGTGTGATGTGTGTGGTGGGGTGTGTGCTGTGTGTTGTATGTGGTGCATGTGTGTTGTGTGTGTGATGTGTGTGGTGGGGTGTGTGCTGTGTGTTGTATGTGGTGCGTGTGTGGTGGAGTGTGTGGTATGTGGTGTGTATTGTTTGGTATGTGTGGTACGATGTGTGGTACAATGTGTGGTGTGTGGTGTGGTGCATGGTGTGTGTATTTTGTGTGTGGTATGTTTGTGTGTGTGTTGTGTATTATCTGTGATGTGGGTTTATGTGGTGTGTGGTGGGGTATGTGGTGTGTGTTATGGTATGTGGGGTGTGTGTCTCTGTGTGGTGTGCGGTGGTGTATGTGGTGTGTGTGGTATGTGATGTGTGTGTTGTGTGATGGGGTATGAGTGTGTGTGTGGTGTGTAGTGTGTGATGTGTGGTGGGGTATGTGATGTGTGTTATGGTATGTGGGGTGTGTGTCTCTGTGTGGTGTGGTATGTGGTGTGCGTGTTGTGTATGGTATGAGTGATGTGTGTGTGTGGTGGGGTGTATGGTGTGTGGTATAGTATGTGGTGTGTGTGGTGTGTTCATGCGTAGTGTGTGGTATGTGGTCTGTGTTGTGGTATGTCGTGCATATGTTGAGCATGCTATGGTAAGTGATGTGTGTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2219:HG3_PB_pbsv_12465:HG4_PB_pbsv_12776:HG2_PB_pbsv_12786:HG3_Ill_GATKHCSBGrefine_8461:HG4_Ill_GATKHCSBGrefine_8819:HG2_Ill_GATKHCSBGrefine_8566:HG2_PB_SVrefine2Falcon2Bionano_6279:HG2_PB_HySA_23292:HG4_PB_HySA_18608:HG2_PB_HySA_23291:HG3_PB_SVrefine2PBcRDovetail_6027:HG4_PB_SVrefine2Falcon1Dovetail_7821:HG4_Ill_SVrefine2DISCOVARDovetail_9120:HG2_PB_SVrefine2PBcRplusDovetail_2116:HG2_PB_SVrefine2PB10Xhap12_9220:HG4_PB_SVrefine2PBcRDovetail_6470:HG3_Ill_SVrefine2DISCOVARDovetail_9345:HG2_Ill_SVrefine2DISCOVARplusDovetail_2472:HG3_PB_SVrefine2Falcon1Dovetail_7785;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2472:HG3_Ill_SVrefine2DISCOVARDovetail_9345:HG4_PB_SVrefine2PBcRDovetail_6470;NumExactMatchSVs=3;ClusterMaxShiftDist=0.138958;ClusterMaxSizeDiff=0.138958;ClusterMaxEditDist=0.186931;PBcalls=14;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=1234;DistBack=14563;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=240;REFWIDENED=11:131995549-131995788;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9992;PctRecOverlap=0.9385;SizeDiff=1;StartDistance=-75;EndDistance=-75;GTMatch=0;TruScore=97;MatchId=1057.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:0:20:1:24:./.:174:545:157:523:./.:0:0:1/1:5:216:.:1312:.
chr11	132891569	HG2_PB_SVrefine2Falcon2Bionano_6281	C	CCAGCATTCCAGCTCACCCATCCTGTGATCCTTATCAGTCATTACAGAAGGTAATTAAGCCAGTGTCGCCGCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8949:HG4_PB_HySA_18614:HG2_PB_HySA_23301:HG2_PB_pbsv_12789:HG2_PB_SVrefine2PBcRplusDovetail_2118:HG4_PB_SVrefine2PBcRDovetail_6471:HG4_Ill_svaba_16016:HG4_Ill_scalpel_11816:HG4_Ill_manta_3019:HG4_Ill_SVrefine2DISCOVARDovetail_9124:HG4_Ill_Krunchall_17762:HG4_Ill_GATKHC_20535:HG4_Ill_GATKHCSBGrefine_8822:HG4_Ill_250bpfermikitraw_16953:HG4_Ill_150bpfermikitraw_16310:HG3_PB_assemblyticsfalcon_5076:HG2_PB_SVrefine2Falcon2Bionano_6281:HG2_PB_SVrefine2Falcon1plusDovetail_2221:HG2_Ill_svaba_15950:HG2_Ill_SVrefine2DISCOVARplusDovetail_2477:HG2_Ill_Krunchall_17443:HG2_Ill_GATKHC_20528:HG2_Ill_250bpfermikitraw_17086:HG2_Ill_150bpfermikitraw_16100;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8949:HG4_PB_SVrefine2PBcRDovetail_6471:HG4_Ill_svaba_16016:HG4_Ill_scalpel_11816:HG4_Ill_manta_3019:HG4_Ill_SVrefine2DISCOVARDovetail_9124:HG4_Ill_Krunchall_17762:HG4_Ill_GATKHC_20535:HG4_Ill_GATKHCSBGrefine_8822:HG4_Ill_250bpfermikitraw_16953:HG4_Ill_150bpfermikitraw_16310:HG3_PB_assemblyticsfalcon_5076:HG2_PB_SVrefine2Falcon2Bionano_6281:HG2_PB_SVrefine2Falcon1plusDovetail_2221:HG2_Ill_svaba_15950:HG2_Ill_SVrefine2DISCOVARplusDovetail_2477:HG2_Ill_Krunchall_17443:HG2_Ill_GATKHC_20528:HG2_Ill_250bpfermikitraw_17086:HG2_Ill_150bpfermikitraw_16100;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0945946;ClusterMaxSizeDiff=0.0810811;ClusterMaxEditDist=0.18543;PBcalls=8;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=72;DistBack=6242;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=11:132891570-132891635;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1058.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:32:0|1:29:3:3:27:0|1:8:0:0:13:0/1:13:18:./.:.:.:.:1376:.
chr11	132897680	HG3_PB_SVrefine2PBcRDovetail_6030	A	ATGTGGTGTATGTGTGTGTGTATTATGTGTGGTGTATCTGTTGTGTGTATGTATATGTGGTGTGTGTGTATGCTGTGATGTGTGTATGCTGTGTGGTCTGATGTGATATGTATAGTGTGTATGGTGTGTATGTGTGTTTGGTGTGTGCGTATGGTGTGATGTGTGTGGTATGTGTGGTGTGTATGTGTGTGTGTTTGCAGTTTGTGTGTGGTATGTGTGATGTGTTTGTGGGTGGTGTGGTGTGTGGTGTGTGTGGTATGTGTGGTGTGTGTGTGGTGTGATGCATGGGTGGTATGTGTGGCATGTATGTGTGATACACCTGGTGTGTATGTGTGTTTGTGTGGTGTGTGTATGGTGTGATGCATGGGTGGTATGTGTGGCGTGTATGTGTGATATACCTGGTGTGTATGTGTGTTTGGTGTGTGTGGTGTGTGTATGGCGTGATGCATGGGTGGTATGTGTGGTGTGTGTGTGTGGTGTGGTGTCTGTGTGGTACATGTGGTGTGGATGGTGTGTATGTATGTTTGGTATGTGTGGCATATATGTATGGTGTGACATGTGTATGGTGTATGGTATCTGTGCTGTGCTGTGTGGAGTAATGGTGATGTGTGTGGTATGTGTGTATGGTGTGACATGTGTGGTATGTGTGGTGTATGGTATCTGTGCTATGGCCTGTGGGGAATGGTGGTGTGTGTGTGGAGGTGGAGGTGGGGGTGTAGTGTGGTGTGTGTTTGTGTGGTGTGATGCACGTGTGGTATGTGTGATGTGTGTGTGCTTGTGTGATGTCTATGGTGGTGTGTGGAGGTGAGGTGGGAGTGCAGTGTGGTGGTGTGTGTGTATGGTGCAATGCATGTGTGGCATGTGTGTTTGTGTGTGTGGTGTCTGTGGTGGTGTGTGTGGAGGTGAGGTAGGACTGTAGTGTGGTGTGTGTTTACGGTGCAATGCATGTGTGGCATGTGTATTGTGTGTTGTGTGTGTGTGGTGTCTGTGGTGGTGTACGTGTGTGTGGAGGTGAGGTGGGAGTGTAGTGTGGTGTGTGTGCATGATGTGATGCATATATGGTATGTGGTGTGTGTGTGGTGTCTGGTGGGGCGTGTGTGGAGGTGGGTTGGGAGTGTAATGTGACGTGTATGTGTGGTGTCTGTGGTGGGGTGTGTGTGGAGGTGGGGTGGGGGTGTAGTATTGTGTGTGTGCTGTGTGTGTTTGGTGTGATGCATGTGTGGTGTGTGGTGTGTGTGTGGTGTCTGTGGTGGGGTGCGTGTGGAGGTAGGTTGGGAATGTAGTACGATGTGTGTGTGGTGCGTGTGTATGATGCGATTCATG	20	PASS	ClusterIDs=HG2_PB_HySA_23302:HG2_PB_pbsv_12790:HG3_PB_pbsv_12469:HG4_PB_pbsv_12781:HG4_PB_HySA_18615:HG3_PB_assemblyticsfalcon_5077:HG2_Ill_breakscan11_4348:HG2_PB_PB10Xdip_5186:HG4_PB_SVrefine2Falcon1Dovetail_7823:HG4_PB_SVrefine2PBcRDovetail_6472:HG4_Ill_SVrefine2DISCOVARDovetail_9125:HG3_PB_SVrefine2PBcRDovetail_6030:HG3_PB_SVrefine2Falcon1Dovetail_7788:HG3_Ill_SVrefine2DISCOVARDovetail_9348:HG2_PB_SVrefine2PBcRplusDovetail_2119:HG2_PB_SVrefine2PB10Xhap12_9222:HG2_PB_SVrefine2Falcon2Bionano_6282:HG2_Ill_SVrefine2DISCOVARplusDovetail_2478:HG2_PB_SVrefine2Falcon1plusDovetail_2222;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2478:HG2_PB_SVrefine2Falcon2Bionano_6282:HG2_PB_SVrefine2PB10Xhap12_9222:HG2_PB_SVrefine2PBcRplusDovetail_2119:HG3_Ill_SVrefine2DISCOVARDovetail_9348:HG3_PB_SVrefine2Falcon1Dovetail_7788:HG3_PB_SVrefine2PBcRDovetail_6030:HG4_Ill_SVrefine2DISCOVARDovetail_9125:HG4_PB_SVrefine2PBcRDovetail_6472;NumExactMatchSVs=9;ClusterMaxShiftDist=0.11285;ClusterMaxSizeDiff=0.11285;ClusterMaxEditDist=0.202541;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=1322;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=11:132897681-132897699;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1059.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:44:1/1:0:24:0:21:./.:4:70:5:63:1/1:0:21:1/1:7:284:.:1376:.
chr11	132925066	HG3_Ill_GATKHC_20396	T	TAATGCTGCCTCCATGATACTTCCAAGTGGTGAGACTCCATGAAGGAGCCACCTCTACTGTAC	20	PASS	ClusterIDs=HG2_PB_HySA_23303:HG2_PB_pbsv_12791:HG4_Ill_GATKHC_20536:HG4_PB_pbsv_12782:HG4_Ill_GATKHCSBGrefine_8823:HG3_PB_pbsv_12470:HG4_Ill_250bpfermikitraw_16954:HG3_PB_assemblyticsfalcon_5078:HG3_Ill_GATKHC_20396:HG3_Ill_GATKHCSBGrefine_8466:HG3_Ill_250bpfermikitraw_16618:HG2_PB_assemblyticsfalcon_5051:HG2_Ill_GATKHCSBGrefine_8568:HG2_Ill_250bpfermikitraw_17087:HG2_PB_PB10Xdip_5187:HG4_PB_HySA_18616:HG3_PB_HySA_19327;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17087:HG2_Ill_GATKHCSBGrefine_8568:HG2_PB_assemblyticsfalcon_5051:HG3_Ill_250bpfermikitraw_16618:HG3_Ill_GATKHCSBGrefine_8466:HG3_Ill_GATKHC_20396:HG3_PB_assemblyticsfalcon_5078:HG4_Ill_250bpfermikitraw_16954:HG4_Ill_GATKHCSBGrefine_8823:HG4_Ill_GATKHC_20536;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0625;ClusterMaxSizeDiff=0.0625;ClusterMaxEditDist=0.27907;PBcalls=9;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=23635;DistForward=39;DistMin=39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1301;REFWIDENED=11:132924649-132925949;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1060.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:12:37:1/1:6:21:3:16:./.:1:2:1:1:0/1:2:6:./.:.:.:.:.:.
chr11	133307557	HG2_PB_pbsv_12796	C	CTCTTCTCAACCCCGGCTCACCTCTCCCCTCTCCAACCCCGCTACCTCTCCCTCTTTGCAACCCTCTCACCTCTCCCCTCTCAAACCCCTCTCACCTCTCCCCTCTCATACCCCGCTCACCTCTCCCTCTGCAACCCCTCTCACCTCTCCCTCAACCCCGCTCACCTCTCCCCTCTCAAACCCCGCTCACCTCTCTCCCCTTCTGCAATACCCGTCTCACCTCTCCCCTCTCAAACCTTCCACCTCTCCTCTCTCAATAACCCCTCTCCACATCTCCCCCTCTCAACCCCTCTCCCCTCCCCTCTTCAACCCCTCTCACGTCTCCCCTTCAACCCCTTCTCACCTCTCCCCTTCTAAACCCCGCTCCACCTCTCCCCGTCTCGACCCCGCTCACCTCTCCCCTCTCAACCCGCTCACCTCTCCCTCTCACCCGCCGCTCACCTCTCCCCTCTGCAACCCGCTCACCTCTCCCCTCGTCAACCCGCTCACCTCTCCCCTTTGCAACCCCTTCTCACCTCTCCCCTCTCAACCCCTCTTCACCTCTCCCTCAAGCCCTGGCTCACTCTCCCTCTGCAACCCTCTCAACCTCTCCCTCTCAACCCCTCTCACCTCTCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2123:HG3_PB_pbsv_12474:HG2_PB_pbsv_12796:HG2_PB_HySA_23310:HG3_PB_HySA_19328:HG2_PB_SVrefine2Falcon1plusDovetail_2226:HG2_PB_SVrefine2Falcon2Bionano_6286:HG4_PB_SVrefine2Falcon1Dovetail_7828;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_12796;NumExactMatchSVs=1;ClusterMaxShiftDist=0.058382;ClusterMaxSizeDiff=0.0517098;ClusterMaxEditDist=0.194079;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=614;DistBack=40;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=128;REFWIDENED=11:133307508-133307635;PctSeqSimilarity=0.9541;PctSizeSimilarity=0.9788;PctRecOverlap=0.9691;SizeDiff=13;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=96;MatchId=1061.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:32:0|1:34:0:2:23:./.:50:9:30:0:./.:14:1:0/1:27:7:.:.:.
chr11	133415747	HG3_PB_SVrefine2Falcon1Dovetail_7792	G	GGCCTCCTTCCCCTGTGCAGCCTCTTCCCACAGTGCAGCCTCCTCCCCCTGTGCGGCCTTCCCCTGTGTGGCCTCCTCCTTCAGCATGGCCTCCTTCCCCTGTGCAGCCTCCTCCCCTGTGCAGCCTCCTCCCCCTGTGCAGCCTCCTCCTTCAGCGTGGCCTCCTCCCCTGTGCAGCCTCCTTCCCCTGTGCAGCCTCCTCCCCCTGTGCAGCCTCCTCCTCCTGTGCGGCCTCCTCCCCTGTGCAGCCTCCTCCTTCAGCGTGGCCTCCTCCCGTGCAGCCTCCTTCCCCTGTGCAGCCTCCTCCTCCTGTGCGGCCTCCTCCCCTGTGCAGCCTCCTCCCTCCCGTGTGCAGCCTCCTCCTTCAGCATGGCCTCCTTCCCCTGTGCAGCCTCCTCCCTGTGCAGCCTCCTCCCCTCTGTGCAGCCTCCTCCTTCGTGGCCTCCTCCCCTGTGCAGCCTCCTCCCCTGTGCAGCCTCCTCCCCCTGTGCAGGCCTCCTCCCTGTGGGCCTCCTCCCCTGTGCAGCCTCCTCCTTCAGCGTGGCCTCCTCCCTGTGCAGCCTCCTCCTCCTGTGCGGCCTCCTCCCCTGTGCAGCCTCCTCCCCTGTGCAGCCTCCTCCTTCAGCGTGGCCTCCTCCCGTGTGCAGCCTCCTTCCCCTGTGCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2125:HG3_PB_SVrefine2Falcon1Dovetail_7792:HG2_PB_HySA_23315:HG2_PB_SVrefine2Falcon1plusDovetail_2228:HG2_PB_SVrefine2PB10Xhap12_9230;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7792;NumExactMatchSVs=1;ClusterMaxShiftDist=0.103896;ClusterMaxSizeDiff=0.102368;ClusterMaxEditDist=0.220977;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=663;DistBack=87083;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=563;REFWIDENED=11:133415748-133416310;PctSeqSimilarity=0.9456;PctSizeSimilarity=0.9157;PctRecOverlap=0.7228;SizeDiff=-61;StartDistance=-170;EndDistance=-170;GTMatch=0;TruScore=86;MatchId=1062.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:43:0|1:16:1:5:37:./.:14:11:16:1:0/0:13:0:0/1:10:9:.:.:.
chr11	133519946	HG4_Ill_GATKHC_20539	C	CTGTGTCCCTCCCCAGGAAGGCCCACTCCCCGGAGCACTGCAACTGCCTCACTGT	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_5058:HG3_PB_HySA_19333:HG3_PB_pbsv_12480:HG4_PB_HySA_18620:HG4_Ill_manta_3020:HG4_Ill_Krunchall_17764:HG4_Ill_GATKHC_20539:HG4_Ill_GATKHCSBGrefine_8825:HG4_Ill_Cortex_699:HG4_Ill_250bpfermikitraw_16958:HG4_Ill_150bpfermikitraw_16311:HG3_Ill_Krunchall_17102:HG3_Ill_GATKHC_20403:HG3_Ill_GATKHCSBGrefine_8470:HG3_Ill_Cortex_733:HG3_Ill_250bpfermikitraw_16623:HG3_Ill_150bpfermikitraw_16150:HG2_Ill_manta_3559:HG2_Ill_Krunchall_17447:HG2_Ill_GATKHC_20533:HG2_Ill_GATKHCSBGrefine_8572:HG2_Ill_Cortex_1696:HG2_Ill_250bpfermikitraw_17092:HG2_Ill_150bpfermikitraw_16104:HG2_PB_HySA_23316;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16104:HG2_Ill_250bpfermikitraw_17092:HG2_Ill_Cortex_1696:HG2_Ill_GATKHCSBGrefine_8572:HG2_Ill_GATKHC_20533:HG2_Ill_Krunchall_17447:HG2_Ill_manta_3559:HG3_Ill_150bpfermikitraw_16150:HG3_Ill_250bpfermikitraw_16623:HG3_Ill_Cortex_733:HG3_Ill_GATKHCSBGrefine_8470:HG3_Ill_GATKHC_20403:HG3_Ill_Krunchall_17102:HG4_Ill_150bpfermikitraw_16311:HG4_Ill_250bpfermikitraw_16958:HG4_Ill_Cortex_699:HG4_Ill_GATKHCSBGrefine_8825:HG4_Ill_GATKHC_20539:HG4_Ill_Krunchall_17764:HG4_Ill_manta_3020;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0720721;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.18018;PBcalls=5;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=22252;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=11:133519917-133519969;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1063.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:28:./.:19:8:1:18:./.:15:0:3:13:0/1:24:26:./.:.:.:.:.:.
chr11	133702958	HG2_PB_SVrefine2Falcon1plusDovetail_2229	G	GGGGGAGGGGGAGGGGGATGGAGGGTGGGGTAGGGGTGCGGGGGGGGGAGGGGAGCGGGGTAGGGGTGCGGGGGTGGGGGAGGGGCGCGGGGTAGGGGTGCGGGGTGGGGGAGGGCGCCGGGTAGGGGTGCGGGGTGGGGGAGGGGCGCCGGTAGTGTGCGGGGGTGGGAGGGGCGGGTAGGGGTGCGGGGGTGGGGTAGGGGTGCGGGGGCGGGGAGGGTGCGGGGTAGGGGTGCGGGGGTGGGGGAGGGGCGCGGGAGTAGGGGGTGCGGGTGGGGGAGGTGCGGGGGTAGGGGTGCGGGGGTGGGGAGGGGTCGGGTGGGGAGGGGTGCGGGTGGGGGAGGGGTGCGTGGTAGGGGTGCGGGGGGAGGGGGCAGGGGTGCGGGTAGGGGTGCGGGGGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6474:HG2_PB_SVrefine2Falcon2Bionano_6288:HG4_PB_SVrefine2Falcon1Dovetail_7830:HG3_PB_SVrefine2Falcon1Dovetail_7793:HG3_PB_pbsv_12482:HG2_PB_PB10Xdip_5196:HG2_PB_HySA_23317:HG2_PB_pbsv_12802:HG2_PB_SVrefine2Falcon1plusDovetail_2229:HG3_PB_SVrefine2PBcRDovetail_6035:HG2_PB_SVrefine2PBcRplusDovetail_2126:HG2_PB_SVrefine2PB10Xhap12_9231;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2229;NumExactMatchSVs=1;ClusterMaxShiftDist=0.101205;ClusterMaxSizeDiff=0.101205;ClusterMaxEditDist=0.235152;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=400;DistBack=-90;DistForward=1;DistMin=-90;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=85;REFWIDENED=11:133702959-133703043;PctSeqSimilarity=0.9356;PctSizeSimilarity=0.985;PctRecOverlap=0.9401;SizeDiff=6;StartDistance=-21;EndDistance=-21;GTMatch=1;TruScore=95;MatchId=1064.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:47:1/1:1:7:2:30:./.:0:3:0:1:./.:0:2:./.:1:6:.:.:.
chr11	133802154	HG2_PB_SVrefine2Falcon1plusDovetail_2230	G	GGACAGACAGACAGACACAGGGACAGACAGACAGACACAGGGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGACAGACAGACAGACACAGGGACAGACAGACAGACACGGGGACAGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGACAGACAGATACAGGGACAGACAGACAGACACAGGGACAGACAGACAGACACAGGGAAGCCAGGTGAGAGAGCAGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCAGACAGACAGACACAGGGAAGCCAGGTGGGAGAGCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7831:HG2_PB_pbsv_12803:HG3_PB_pbsv_12483:HG4_PB_pbsv_12789:HG3_PB_HySA_19335:HG4_PB_SVrefine2PBcRDovetail_6475:HG4_PB_HySA_18623:HG3_PB_SVrefine2Falcon1Dovetail_7794:HG2_PB_SVrefine2Falcon2Bionano_6289:HG2_PB_SVrefine2Falcon1plusDovetail_2230;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2230:HG2_PB_SVrefine2Falcon2Bionano_6289:HG3_PB_SVrefine2Falcon1Dovetail_7794;NumExactMatchSVs=3;ClusterMaxShiftDist=0.248341;ClusterMaxSizeDiff=0.24455;ClusterMaxEditDist=0.312796;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=574;DistBack=17;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=785;REFWIDENED=11:133802155-133802939;PctSeqSimilarity=0.977;PctSizeSimilarity=0.9878;PctRecOverlap=0.44;SizeDiff=7;StartDistance=-318;EndDistance=-318;GTMatch=0;TruScore=80;MatchId=1065.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:32:1|0:1:22:24:3:./.:1:7:0:7:./.:0:0:0/1:3:11:.:.:.
chr11	133925372	HG3_Ill_SVrefine2DISCOVARDovetail_9356	G	GCCTGTAATCCCAGCTACTCAGGAGGCTGAAGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGGTGAGATCGCGCCACTGCACTCCAGCCTGGATGACAGTCTCCGAAAAAAAAAAAAAAAAAAGGGAGCGGAAGGCCGGGTGTGGTGGCTCACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2233:HG2_PB_pbsv_12806:HG4_PB_pbsv_12791:HG3_PB_pbsv_12486:HG4_PB_HySA_18624:HG2_Ill_MetaSV_918:HG4_PB_SVrefine2Falcon1Dovetail_7833:HG4_Ill_MetaSV_966:HG4_Ill_GATKHCSBGrefine_8826:HG3_Ill_SVrefine2DISCOVARDovetail_9356:HG3_Ill_MetaSV_1004:HG3_Ill_GATKHCSBGrefine_8471:HG2_Ill_GATKHCSBGrefine_8573:HG3_PB_HySA_19337:HG2_PB_HySA_23321:HG2_PB_PB10Xdip_5201:HG2_PB_SVrefine2Falcon2Bionano_6291:HG4_Ill_SVrefine2DISCOVARDovetail_9131:HG4_PB_SVrefine2PBcRDovetail_6476:HG3_PB_SVrefine2Falcon1Dovetail_7796:HG3_PB_SVrefine2PBcRDovetail_6038:HG2_PB_SVrefine2PBcRplusDovetail_2130:HG2_PB_SVrefine2PB10Xhap12_9235:HG2_Ill_SVrefine2DISCOVARplusDovetail_2485;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8573:HG3_Ill_GATKHCSBGrefine_8471:HG3_Ill_MetaSV_1004:HG3_Ill_SVrefine2DISCOVARDovetail_9356:HG4_Ill_GATKHCSBGrefine_8826:HG4_Ill_MetaSV_966;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0648968;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.189911;PBcalls=15;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=165;DistBack=-35;DistForward=0;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=11:133925353-133925407;PctSeqSimilarity=0.994;PctSizeSimilarity=0.9939;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1066.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:26:1/1:0:21:1:7:./.:0:3:0:5:1/1:0:22:./.:.:.:.:.:.
chr11	134353375	HG2_Ill_SVrefine2DISCOVARplusDovetail_2491	T	TTCCAGAGTATCTCCCCCTCCGGCCGGAAGTTCTGTCTAACCGATACGGGTTATCCAGAGTATCTCCCCCTCCGGCCGGAAGTTCTGTCTAACCGATACGGGTTA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2491:HG4_PB_SVrefine2Falcon1Dovetail_7840:HG2_PB_assemblyticsfalcon_5077:HG2_PB_SVrefine2Falcon1plusDovetail_2241:HG3_PB_pbsv_12498:HG2_PB_pbsv_12815;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2491;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.196262;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=104;DistBack=25657;DistForward=154;DistMin=154;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=156;REFWIDENED=11:134353376-134353531;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1070.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:26:./.:36:14:8:11:./.:3:2:6:0:0/1:16:17:./.:.:.:.:.:.
chr11	134509146	HG4_Ill_250bpfermikitraw_16971	C	CGCAAGAGTAGAGGGGAAGGAGGACTTGGAGGGAAATAGAAACTGCCTGACACGGGACCCACT	20	PASS	ClusterIDs=HG2_PB_pbsv_12822:HG2_PB_HySA_23339:HG4_PB_HySA_18634:HG4_Ill_manta_3022:HG4_Ill_GATKHC_20553:HG4_Ill_GATKHCSBGrefine_8832:HG4_Ill_250bpfermikitraw_16971:HG4_Ill_150bpfermikitraw_16322:HG3_Ill_GATKHC_20426:HG3_Ill_GATKHCSBGrefine_8479:HG3_Ill_250bpfermikitraw_16640:HG2_PB_assemblyticsfalcon_5087:HG2_Ill_Krunchall_17462:HG2_Ill_GATKHC_20555:HG2_Ill_GATKHCSBGrefine_8579:HG2_Ill_250bpfermikitraw_17112:HG2_Ill_150bpfermikitraw_16119;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16119:HG2_Ill_250bpfermikitraw_17112:HG2_Ill_GATKHCSBGrefine_8579:HG2_Ill_GATKHC_20555:HG2_Ill_Krunchall_17462:HG2_PB_assemblyticsfalcon_5087:HG3_Ill_250bpfermikitraw_16640:HG3_Ill_GATKHCSBGrefine_8479:HG3_Ill_GATKHC_20426:HG4_Ill_150bpfermikitraw_16322:HG4_Ill_250bpfermikitraw_16971:HG4_Ill_GATKHCSBGrefine_8832:HG4_Ill_GATKHC_20553:HG4_Ill_manta_3022:HG4_PB_HySA_18634;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0787402;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.15748;PBcalls=4;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=16803;DistForward=48;DistMin=48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=116;REFWIDENED=11:134509129-134509244;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1071.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:34:0|1:40:2:3:33:./.:8:0:3:13:0/1:31:14:./.:.:.:.:.:.
chr11	134777558	HG3_Ill_150bpfermikitraw_16163	A	AGCACAGCAGCAGGTCTAGATCCACAGAGAAACTGAGACTCAGCACTAAACACCAGT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_16127:HG3_PB_pbsv_12516:HG2_PB_assemblyticsfalcon_5100:HG4_PB_pbsv_12818:HG2_Ill_breakscan11_4350:HG3_PB_HySA_19365:HG4_Ill_svaba_16039:HG2_PB_pbsv_12833:HG4_Ill_manta_3025:HG4_Ill_Krunchall_17788:HG4_Ill_GATKHC_20564:HG4_Ill_GATKHCSBGrefine_8839:HG4_Ill_250bpfermikitraw_16980:HG4_Ill_150bpfermikitraw_16328:HG3_Ill_svaba_16132:HG3_Ill_scalpel_12328:HG3_Ill_Spiral_13358:HG3_Ill_Krunchall_17119:HG3_Ill_GATKHC_20431:HG3_Ill_GATKHCSBGrefine_8481:HG3_Ill_250bpfermikitraw_16642:HG3_Ill_150bpfermikitraw_16163:HG2_Ill_svaba_15980:HG2_Ill_SpiralSDKrefine_3233:HG2_Ill_Krunchall_17468:HG2_Ill_GATKHC_20566:HG2_Ill_GATKHCSBGrefine_8581:HG2_Ill_250bpfermikitraw_17120;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16127:HG4_Ill_svaba_16039:HG4_Ill_manta_3025:HG4_Ill_Krunchall_17788:HG4_Ill_GATKHC_20564:HG4_Ill_GATKHCSBGrefine_8839:HG4_Ill_250bpfermikitraw_16980:HG4_Ill_150bpfermikitraw_16328:HG3_Ill_svaba_16132:HG3_Ill_scalpel_12328:HG3_Ill_Spiral_13358:HG3_Ill_Krunchall_17119:HG3_Ill_GATKHC_20431:HG3_Ill_GATKHCSBGrefine_8481:HG3_Ill_250bpfermikitraw_16642:HG3_Ill_150bpfermikitraw_16163:HG2_Ill_svaba_15980:HG2_Ill_SpiralSDKrefine_3233:HG2_Ill_Krunchall_17468:HG2_Ill_GATKHC_20566:HG2_Ill_GATKHCSBGrefine_8581:HG2_Ill_250bpfermikitraw_17120;NumExactMatchSVs=22;ClusterMaxShiftDist=0.103448;ClusterMaxSizeDiff=0.0854701;ClusterMaxEditDist=0.297521;PBcalls=5;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=62;REFWIDENED=11:134777559-134777620;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1073.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:23:1:3:32:1|0:0:9:13:0:0/1:21:20:./.:.:.:.:.:.
chr12	619660	HG4_Ill_250bpfermikitraw_16995	A	AGGGCTGGGCTGGGAGGGAGTTGGCTGGGCTGGGAGGGAGTTGGCTGGGCT	20	PASS	ClusterIDs=HG4_PB_pbsv_12844:HG4_Ill_Krunchall_17806:HG4_PB_HySA_18670:HG2_PB_HySA_23372:HG4_Ill_manta_3027:HG3_Ill_manta_2911:HG4_Ill_250bpfermikitraw_16995:HG3_Ill_Krunchall_17141:HG3_Ill_250bpfermikitraw_16660:HG2_Ill_Krunchall_17484:HG2_Ill_250bpfermikitraw_17136:HG2_PB_PB10Xdip_7011:HG2_PB_PB10Xdip_7010:HG2_PB_pbsv_12860;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17136:HG2_Ill_Krunchall_17484:HG3_Ill_250bpfermikitraw_16660:HG3_Ill_Krunchall_17141:HG4_Ill_250bpfermikitraw_16995:HG4_Ill_Krunchall_17806;NumExactMatchSVs=6;ClusterMaxShiftDist=0.150943;ClusterMaxSizeDiff=0.150943;ClusterMaxEditDist=0.31068;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=19;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=12:619659-619664;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1074.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:40:./.:0:1:0:0:./.:0:0:0:0:1/1:0:20:./.:.:.:.:.:.
chr12	686596	HG2_Ill_GATKHCSBGrefine_8588	C	CATATATATGTATATATATATATACATATATATATGTATATATATATATATACATATATATGTATATATATATATACATATATGTATGTAT	20	PASS	ClusterIDs=HG4_PB_pbsv_12848:HG4_Ill_svaba_16054:HG4_Ill_SVrefine2DISCOVARDovetail_9156:HG4_Ill_GATKHC_20590:HG4_Ill_GATKHCSBGrefine_8851:HG4_Ill_250bpfermikitraw_16996:HG4_Ill_150bpfermikitraw_16345:HG3_Ill_svaba_16148:HG2_PB_SVrefine2Falcon2Bionano_6323:HG2_Ill_svaba_15996:HG2_Ill_SpiralSDKrefine_3249:HG2_Ill_SVrefine2DISCOVARplusDovetail_2507:HG2_Ill_Krunchall_17485:HG2_Ill_GATKHC_20591:HG2_Ill_GATKHCSBGrefine_8588:HG2_Ill_250bpfermikitraw_17137:HG2_Ill_150bpfermikitraw_16140:HG2_10X_SVrefine210Xhap12_8992:HG3_Ill_Spiral_13375:HG3_Ill_Krunchall_17143:HG3_Ill_GATKHCSBGrefine_8492:HG3_Ill_250bpfermikitraw_16662:HG2_Ill_breakscan11_4351:HG3_PB_pbsv_12550;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8992:HG2_Ill_150bpfermikitraw_16140:HG2_Ill_250bpfermikitraw_17137:HG2_Ill_GATKHCSBGrefine_8588:HG2_Ill_GATKHC_20591:HG2_Ill_Krunchall_17485:HG2_Ill_SVrefine2DISCOVARplusDovetail_2507:HG2_Ill_SpiralSDKrefine_3249:HG2_Ill_svaba_15996:HG2_PB_SVrefine2Falcon2Bionano_6323:HG3_Ill_svaba_16148:HG4_Ill_150bpfermikitraw_16345:HG4_Ill_250bpfermikitraw_16996:HG4_Ill_GATKHCSBGrefine_8851:HG4_Ill_GATKHC_20590:HG4_Ill_SVrefine2DISCOVARDovetail_9156:HG4_Ill_svaba_16054;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.120219;PBcalls=3;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=90;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=12:686582-686614;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1075.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:22:0|1:22:1:2:20:./.:29:1:2:19:0/1:28:18:./.:.:.:.:.:.
chr12	785369	HG2_PB_SVrefine2PBcRplusDovetail_2162	A	GCCCACCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_9158:HG2_Ill_manta_3564:HG4_PB_SVrefine2PBcRDovetail_6504:HG2_Ill_SVrefine2DISCOVARplusDovetail_2510:HG2_PB_SVrefine2PB10Xhap12_9279:HG4_PB_SVrefine2Falcon1Dovetail_7878:HG2_PB_SVrefine2Falcon1plusDovetail_2270:HG3_PB_SVrefine2PBcRDovetail_6068:HG3_Ill_SVrefine2DISCOVARDovetail_9378:HG2_PB_assemblyticsPBcR_4987:HG2_PB_SVrefine2PBcRplusDovetail_2162:HG2_PB_SVrefine2Falcon2Bionano_6325:HG2_10X_SVrefine210Xhap12_8995:HG3_PB_assemblyticsfalcon_5154:HG3_PB_SVrefine2Falcon1Dovetail_7835:HG4_Ill_GATKHCSBGrefine_8853:HG3_Ill_GATKHCSBGrefine_8493:HG2_Ill_GATKHCSBGrefine_8589:HG4_Ill_MetaSV_979:HG3_Ill_MetaSV_1018:HG2_Ill_MetaSV_927:HG4_PB_pbsv_12852:HG2_PB_pbsv_12866:HG2_PB_HySA_23380:HG3_PB_pbsv_12552:HG3_PB_HySA_19388:HG4_PB_HySA_18678;NumClusterSVs=27;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6325:HG2_PB_SVrefine2PBcRplusDovetail_2162:HG2_PB_assemblyticsPBcR_4987:HG3_Ill_SVrefine2DISCOVARDovetail_9378;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0882353;ClusterMaxSizeDiff=0.0735294;ClusterMaxEditDist=0.254545;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=134;DistBack=0;DistForward=13863;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=143;REFWIDENED=12:795196-785368;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=0.9407;SizeDiff=0;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=97;MatchId=1076.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:0:33:1:11:./.:1:8:1:7:1/1:1:46:./.:.:.:.:.:.
chr12	1160952	HG4_PB_SVrefine2Falcon1Dovetail_7883	G	GGTGAATTAATAAAGCACTAAGGCACCGTGTCCTTATGATCGCCTCTGCTCCTGCCTGCTTCTCTTGTTTTCTGTTCTTGATGAATAGT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2515:HG4_PB_pbsv_12859:HG2_PB_PB10Xdip_6484:HG2_PB_PB10Xdip_6483:HG4_PB_HySA_18688:HG2_PB_HySA_23386:HG2_PB_pbsv_12871:HG3_PB_pbsv_12556:HG2_PB_assemblyticsPBcR_4995:HG2_PB_SVrefine2PBcRplusDovetail_2166:HG2_PB_assemblyticsPBcR_4994:HG4_PB_SVrefine2PBcRDovetail_6508:HG4_PB_SVrefine2Falcon1Dovetail_7883:HG3_PB_SVrefine2Falcon1Dovetail_7839:HG2_PB_SVrefine2PBcRplusDovetail_2165:HG2_PB_SVrefine2PB10Xhap12_9282:HG2_PB_SVrefine2Falcon2Bionano_6329:HG2_PB_SVrefine2Falcon1plusDovetail_2273;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2515:HG4_PB_SVrefine2PBcRDovetail_6508:HG4_PB_SVrefine2Falcon1Dovetail_7883:HG3_PB_SVrefine2Falcon1Dovetail_7839:HG2_PB_SVrefine2PBcRplusDovetail_2165:HG2_PB_SVrefine2PB10Xhap12_9282:HG2_PB_SVrefine2Falcon2Bionano_6329:HG2_PB_SVrefine2Falcon1plusDovetail_2273;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0883978;ClusterMaxSizeDiff=0.0773481;ClusterMaxEditDist=0.297872;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=88;DistBack=35628;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=263;REFWIDENED=12:1160953-1161215;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1077.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:./.:8:25:2:26:./.:3:0:5:0:0/1:13:5:./.:.:.:.:.:.
chr12	1177129	HG2_10X_SVrefine210Xhap12_9000	G	GCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAGCATCCGCCTCCCGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTATAGGCGCCCACCACCAAGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGTTTTCTCCATCTTGGCCAGGCTGGTCTCGAACTCCTGACTTTGTGATCTGCCCACCTCGGCCTCCCAAAGTACTGGGATTACAGGCGTGAGCCATTGCGGCCGGCCTAGCCACTACTTTTTAGAGTAATTGCCATAGCTGGTTGTGTCAGTTTGACATTTTGATTTCAAAGATTGTATTATAGTCGTTTGCCAAATGTCAAACAGTGAGTTCAGTGTTCTTGAATGATAGGCATAAACTCACTGGTGCTTTGTTTGTTAACAGTATTATATAAGATGATTTTATAACTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGTTCTGTCCCCCAGGTGGAGTGCAGTGGCGCCATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCGTGCCATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCTGCCACCAAGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGGTGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTTGGCCTTCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCGGCCCCCCCCTTTTTTTTTTTTTTTTTTTGAGACGAAGTCTCACTCTGTCGCCCAGGTTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCCGCCTCCTGAATTCAAGCGATTCTCCTGCCTCAACCTCCTGAGTAGCCGGAATTACAGGCAGGCACCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGTTGGGGTTTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTTGTGATCCGCCTGCCTCGGCCTCCCAAATTGCTGGGATTACAGATGTGAGGCATCGCGCCCACCTTATAATTTCTTATTTTGTCTGTAAACTCTGTGTATAGTGCTGAAATGAGAGCTTCCCTTGACTCTAAAGAGTATATTTATATTGCCCAATGAAGCTTTTATGTATTGATTTCAGGTTATTGGCTGCCTAACTTTAATACTTAAGTGAACTTATAACTTGATTAGAACCTTGATGATACTGGGTAGGTAGGGATTTTCAAAAAGCAGGCGGATTTTACTTACAGGCCAGTCTCAAGGACAACTATTGCTTTCTAGCTTTAAAATGTCCCTCAGTAGTGTACATTTGAAGGTCTGGCAAATTTCTTAGTTTTAGTGTTCATTGTTTCTTGACTGGAGACTAACTTTGGAACTGACTTTGGAGTATGTGGAAGAGTGTATTGTTAGGGTAGCACTGTTAAGATTCTTGATCTGTGTATTTTTTGTTTTTGAGACATAGTATCGCTCTATAGTCCAGGCTGGAGTGCGGTGGTGTGATCATGGATCATTGTACCCTTGACCACCCCAGCTCAAGTGATCCCCCAGCGTCAGCCTCCTGAGTAGCTGAGACCACAAGCACGTGCCACCATGCCAGGCTCATTTTAAATTTTTTTGTGGAGACAGGGCCCCGCCATGTTGCCCAGGCTGGTCTTTACCTCCTGGGCTCAAGCAGTTCTTCCTCCTCAGCCTCCCAAAGTACTGAGATTGTAGGCATGAGCTACTGCGTCTGGCCTGATCTCTGTATTCTTTGAGAAGAATATTCTATTCACCCTCCTTTACTTTATAAGCACAATTGTACCATCTTCAGGAAGCATTCATTATCTTTTGCAATGTTACTTCTCTCTAAACGCGGAGTAGATAACATAGTACTTTGTAGAGTTATTTCTTTAATATTCTTTCCTCATTACAAAGTAATATTAACATATGATAAAAAAATGTTTAAGAATACTAAAGGGTATGTAGGAAAAGAAACCTTCTATACTTCTATGTGTCATAGACATATTCAGCTGGGTTGATGCATGCATGTGTACACATACCACACACATTTCTTTCGTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCACTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGACGTTAGCCACCGCGCCCGGCCTCTTTCGTTCTTTTAGAGAGACAGAGTCTCACTGTGTTGCCCAGGCTGGAGTGCAGTGGCACAATCATAGCTAACTGAGCCTCAAACTCCTGGGCTCCAGTGATCCTCCTGCCTCTGCTGCCTGAGTAGCTAGGACTACAGGTGTGAACTAATAGCCCTGGCTAATTTTTAAAAAATTTTTTGTAGAGACAGGATGTCGCTCTGTTGCCTGGGCTGGTCTCGAATTCCTAGCCTTAAGCAATCCTCCCTCCTCAGCCTCCCAAAGTGCTGGGATTATAGGTGTTAGCCACTACACCTGGCCCTCACACTCTTTATATGACTTTAAAGAACTGATTTAAAAACTTTAGAGCATCTGCCCTATGTTACTAAATATTCTTCAGGAAGGTTATTTTAAATGACTATATGAAATGATGTCATATTTTTAGCTGTTCTTTTATTGTTGGATAGTTAGGGTATTCCTTCTTTTTATTATAATACTGTTATGACTATCTTTGTTAATACATTTTCACATTTTCTGATTATTTTCCTAAGGTAGATTGCTAAATAATTGAACCTGTTTGTCAAAGATGATCAAAGGAATTACAGGAGAGTCCTTTTCCCCCCATATACATTATATATTATTAAAGTGTTTAACATATTTTAACATAGTTAACATTACTTTGTAATGAAAAAAATGTTACAAAAATGAGTCCACAGATTATTATATTATCTACCTTGTGTTTGGAGAGAAAAGCAACATTGCTAAAATACAGTCTCTGCTTCTTGATGATGACACAATTGTGCTTATAAAATGAAAGAGGTGTATTATAATATTCTTAAAGAATACGTGTTTTTAAAGTAGCTCTTGATCAGCCCTTCTCAATTCCATCCTTGAGGAAATTAAGCTCTGATGCCTTGAGGCATCTACTATGGGTAGTGAAATTAACGTATTTCCTGTGCGTCTTGAACTCTACTGGCTTGAATTATCCTTGAGAGAATTGAGAAAACAGTCATGAAATTATTTTATGTAGGGCTTAATTCTTTAGCAGAATACAGTGCTGGTTTAGAAAGGCTGTTCTGGATATACCTATTGACAGATTGTTTTCCATAAAATTAGACCATCTCACTAGCAGTGTGTAAGAATGACTGTCTCACTTCCCATCTTAATGTTATCTTCAAAGATCTTTTCCCTGAAAAAAAATCTTGCCTGTTTTATAGGTTAAAAAGTATTATTTTGTTTTAATTTGCATTTTTTGGTTTACATTTTTCTTGTGTTTACTGGCTATTTGGGTATTATCTGTGAATTGCGTATTTTTTGTTAATTTTTCTTGGGGAAGGGAAGAGCTTAATATTTAATTTATATGGGCTCTATATAGTGAGGATAAAGTTTTTCCTCTCACATTTGTTATAAATAATTTTCAGTGTTTGTCATTTGCTCTTTAGTCTTTATATTTTTGATGTATACACATTTTATATTGGTAAGCAGTAAAATGTACCACACTTTTTTTTTTTTTTTTTTTTTGCAATTCCTTACATTTCTTTTTTGCTTGGAAAGGCCTTCTTTATCTGAATGAGTATCATTAAATGTGTATATATATTTTTTATTTTCTAATTAATTTGCATTTTACTCTTAGTTCTTTAATCTTCCTTAAGAATTTATTTTGTATTTTTGTGTGAGGAGACAAACTTATTTTGATGTTTTCCTAATAACTGAAGAACGTTCTACACAGTGTATGGGTAAATGATCAGTGTCTTTCCTTTTGGTTTGTGGCATTTTGTTGTTGTTGTTGTTAAGTGCTTATATATTATACGATCTATTTTTCTGTTTGTTATCCTTTTTTCTAGTACTTTTTTATAGTACTAGATTGATTTAATTATTACAGGCTTATAATTTTGTATTAATGGCCGGTTGGGCATTAAAAAAATTTCCCTCCCGTATCTGTATTTTTGCCATTCTCACTCTTTATTCTTAGGTGCTGCCCAATACTCTTACCCAACTCTTTTTATATCCCAGCTGCCTCAGGGCTCAGCTCAGATGCTGTTTCTTCAAAGGGCCCTCCTGAACCCAACACTATCTAAAGTAGAAAATCCTGTACCCAATCTGCCATATTATCCTATCTCTTCAATATCATTTATCACAATCTGTAAATAACATTCTTGACAGTTTGTCTACTCTCTTTTTCATTGGAATTTCGGTTCCATGAGGGTAAAGATCTTATTTTTCTTGCTTACTGCTGTACCCCTTGTACCTGACACATGGTACATACTCAATAAATATATTTTGGATCACTGAATAAATTAAAAATGAGCTTTAGAACTGTTCTTTTTCTCAGTCAGCCACAACTAGGGTTGTGTTAAACCTACAAATTATTTTTCAAGTATGGCTTGGGCCAGGTATGGTGGCTCATGTCTGTAATCCCGGCACCTTGGGAGGCTGAGGTGGGCAGATTGCTTGAGCCGAAGACTTCATGACCCGCCTGGGCAACGTGGTGAAACCTCATCTGTAAAAAAAATAAAAAAGTTAGCCAAGTGTCGTGGCATGCACTTGTGGTCTCAGCTACTGTGGAGGCCGGGGTGGGAGGATCACTCGAGCCTGGGAAGTTGAGGCTGCAGTGAGCCAGGATTGCACCACTGCACTTCAGCCTGGGTGACAGAGTGAGACCCTGTGTCAAAAAAATAAAAATAAAGTATGGCTTTTTTTTTAATTGATTAAAAGTTTATTTACTTGTTCCAGCAAAGTGTTGTAGTTTTCTTCATTTAAGTGTTGCGTATTTCTTGTCAAGGTTACTACTATGTAATTTGTAAAATTTTTTTGCCTACTTTGAATGGATTTTTTCCCTATCATATTTTTTCAGTAATTAAAAATTGAAACAATCTCAAATTTAGAGAAAAATTCCAAATACGGTAAAAATAACTTTTTTGCCTCTGTAACCATTTGAGGATAAATTGCCAACCTATATGTCATCATACCGCTCCCCTTCATACAGTGTATGTTTCCCACAAAAAGGGACCTTTGGCATAACCATCACATTCAGGAAATTACCTTTAAATTCAAATTTTGTTTGTTGTTCTAATAAACAAAAATAATCTTTGTAAATAAAAAAGATTGAGTTTAGAATCACAGGTTACATGTCTCTCTTATCTCCTTCAGTCCACAGGTTGCATGTCTCTTTCATCTCCTTCAATCTGGGACACTTTCTGTCTGTTTTTGGCTTCATGACCTGGATACTTTCAAGGTTTACAGACTAGTAGTTTTATAGAATATACTTCTATTTGGATTGTCTTATGTTTCTTCATTATATGCTCAGGTTGTATATCACTGAAAAGAATATCACAGAAGTGATGCTCTGTTCTTGTCATTGTACCCTGGCAGGTGGCACATGATTGTCAGGCTGTCTTATTACTGAAGATGATCACTTTGATTGCTTGAGCAAGGTGATAATATCTTTCCAGCTTCTCCACTGGGCAGTTACTCTCCTTTTGTAATTAATACTTATTTTGTGAGGAGATACCTTGAGACTATATACATATCTCATTCTTCATCAACTGTTCAATTTATTTATGTCATATCTGTATGGATTTATAGATCCCTGTTTTTTTCAGTAGTTTGTATGTAATCACCATTATTGAATTTGATGCTCAATCTGTCCAAGAGTTGGCCAGTAGGAGCCCATTCAAGCTCACTCCTGTGTCTGGTAGACATGTTCCTGTTATTCTTTGAGTACTTCCTTTCTTTCTGGCGTGAAAATTTTAGGTTCACTAAAGTTATTTAATATTCTTGTGTGAATATTTAAGTTTTCTTGTTTTGTATAGAAACCTTAAGGTTAAACAAGTAGCTTTATTTGAAATGTCAATTACCCCTGTAATATGGGGACCAAAAATTTTGTTCAAAACTGTCAGAAAAACCTGTGCATGGTGGCATGCATGCCTGCAGTCCCAACCACTCAGGAGAGGCTGAGGTGGGAGGATTGCTTGAGCTCAGGAATTTGAGATCAACCTGGGCAGTAAAGCGAAACCCCCATCTCTCTATTAAACACACATGCACACACACACACAGGAAATTGTCAGAATAAAGACATGTATAAGCATCTATCCCTGCTCATATATTTGGATTAAAAAAATGCTAAGCATCAGTAAAGAATCGGGTATCCCTGTGTGACTACTTAATTTTTTTTTTAGTTCCTAAAGTGAAAAGTAATTATTTTTGTATGCAATAAATAAGAAAGGACCAGAAGAGAAACTTGATTGTTGTGTCTTTTAAGCCTTTAGGTTCCTTATCTCCAAGATAATTTTATAGGGATTTTTGAGATCAAAATTTTGGCACCTTAGTGTACAAGTACAACAGTACTTGGCATTTTGTAGAGATTCTCAGGGAAATATGTTATTTTATGATGTTAGGTGAAAGGAGGAGAGAAATTAGAATTATTCCCAATCTTTTCTGTTTCCTCTCTCTTTCCTTCTTTGAGAGAGATTATAGTTGAAAAGAGGAAGCAGCAAGGTGGGAAGGAACATAGATGGAGAGAGATGTTTAAGTTTTTGAAGCGATGATGATGAGATGAGTTTTTTTTTTTTGAGACGGAATCTCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2167:HG2_PB_PB10Xdip_6485:HG2_PB_SVrefine2Falcon1plusDovetail_2274:HG2_10X_SVrefine210Xhap12_9000:HG4_PB_SVrefine2PBcRDovetail_6509:HG2_PB_SVrefine2PB10Xhap12_9283;NumClusterSVs=6;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9000;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00229885;ClusterMaxSizeDiff=0.00201149;ClusterMaxEditDist=0.0160896;PBcalls=5;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=6963;DistBack=16000;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=265;REFWIDENED=12:1177130-1177394;PctSeqSimilarity=0.9978;PctSizeSimilarity=1;PctRecOverlap=0.9687;SizeDiff=0;StartDistance=-218;EndDistance=-218;GTMatch=0;TruScore=98;MatchId=1078.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:20:0|1:21:0:0:22:./.:12:3:0:4:0/1:10:11:0/1:216:404:.:1123:.
chr12	1645375	HG2_10X_SVrefine210Xhap12_9007	G	GATGCGGGCTGGCTGGCAGGGCCGCTAGAACCCCTTGGCACCTGCCCTGGACTTGCTCTGCCTTGAAAGATGGAGGCGGCTTTATGTGGGACACTAGCACCACCGACTGCTTGTGTCAGCATGCCTCGCCCTTCCCCAGGGAAATGCGTCTCACGGACATTGACTGTGTCCCATCAGGCCTAAGAGTCATTTTGATCATTACATGACAGGAAGAGAGGTTTGTGGAAGGACTGGGAGAGCACAGATGCTCAGGGTGGGCTGTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4352:HG3_PB_pbsv_12565:HG2_PB_pbsv_12885:HG3_Ill_MetaSV_1023:HG3_Ill_GATKHCSBGrefine_8500:HG3_Ill_Cortex_738:HG2_Ill_MetaSV_932:HG2_Ill_GATKHCSBGrefine_8596:HG2_Ill_Cortex_1710:HG2_10X_SVrefine210Xhap12_9007:HG2_PB_SVrefine2Falcon1plusDovetail_2282:HG2_PB_SVrefine2Falcon2Bionano_6332:HG2_PB_HySA_23406;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9007:HG2_Ill_Cortex_1710:HG2_Ill_GATKHCSBGrefine_8596:HG2_Ill_MetaSV_932:HG3_Ill_Cortex_738:HG3_Ill_GATKHCSBGrefine_8500:HG3_Ill_MetaSV_1023;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0676692;ClusterMaxEditDist=0.193784;PBcalls=5;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=262;DistBack=14032;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=12:1645376-1645378;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1079.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:0|1:22:2:4:20:1|0:0:29:17:0:0/1:38:13:./.:.:.:.:.:.
chr12	1652490	HG3_Ill_SVrefine2DISCOVARDovetail_9389	CA	TGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACGCAAGCTCCGCCTCCTGGGTTCACACCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGTATTAGTAGTATTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGGGCCTGGCCTCCTGGCTAATTTTTAAAAATTTTGTAGAGAGAGCGTCTCGCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGCGATCCTCCTGCCTCAGCCCCCCAAAGTGTGAGCCGCTGCTCCCAGCCTAGAGAATTATTGAGTACCTTTC	20	PASS	ClusterIDs=HG2_Ill_MetaSV_933:HG2_PB_HySA_23408:HG4_PB_SVrefine2Falcon1Dovetail_7893:HG2_PB_SVrefine2Falcon1plusDovetail_2283:HG3_PB_assemblyticsfalcon_5171:HG3_PB_SVrefine2Falcon1Dovetail_7846:HG3_Ill_manta_2915:HG2_10X_SVrefine210Xhap12_9008:HG3_PB_SVrefine2PBcRDovetail_6077:HG3_Ill_SVrefine2DISCOVARDovetail_9389:HG2_PB_SVrefine2Falcon2Bionano_6333:HG2_PB_HySA_23407:HG3_PB_pbsv_12566:HG3_Ill_Spiral_13394:HG2_PB_pbsv_12886:HG2_Ill_Spiral_878:HG4_PB_pbsv_12869:HG3_Ill_MetaSV_1024;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6333:HG3_Ill_SVrefine2DISCOVARDovetail_9389:HG3_PB_SVrefine2PBcRDovetail_6077;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0646651;ClusterMaxSizeDiff=0.0623557;ClusterMaxEditDist=0.211845;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=423;DistBack=0;DistForward=31011;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:1652492-1652489;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9976;PctRecOverlap=0.9953;SizeDiff=-1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1080.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:0|1:27:5:2:24:1|0:0:11:19:0:0/1:23:10:0/1:14:54:.:1575:.
chr12	1730120	HG2_PB_PB10Xdip_6933	G	CCTCCCAAAGTGCTGGGATTACAGGTGTGAACCACCGGGCCTGGCCGGTCAAGAGTGTTGCTATTCTTGACAAATTTCCTGATGTACAGACATCTCTAGTGGGGTGGAATTAACTGCATCATAAGAAACACTTTTTAAAAATGTAACAGCTTTCCTGAGATATAATTTACATACCATACAGTTCACCCATTTAAAGTATACAGTTCAGGCCAGGCGTGGTGGTGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACATGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACGTGGTGAAACCCTGTCTTTACTAAAAATACAAAAATTAGCCGGGTGTGGTGGCGGGTGCCTGTAATCCCAGCTATTTGGGAGGCTGAGGCAGGAGAACCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCCGGCCACTGCACTCCAGTGGGCCACTGCACTTCAGCCTGGGTGACAGAGCAAGATTCCATCTAAAAAAAAAAAAAAAAGATTTTGTATTTCTAACAAGTTTCCAAATGATGCAGATACAGTGGACCACACTTTGAGAAAACTGGTTGCTGGCTGTTACTTTCTTTTTTTTTTTTTTTTGAGATTGAGTTTTGCTCTTATTGCCCAGGTTAGAGTGCAGTGGTGTGATCTCAACTCACTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCTGAGTAGCTAGGATTACAGGCACGTGCCACCACGCCCGGCTAATTTTGTATTTTTAGTAGGGATGGGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGATGATCCGCCCGCCTTGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6079:HG2_PB_HySA_23411:HG4_PB_pbsv_12871:HG4_PB_SVrefine2Falcon1Dovetail_7895:HG2_PB_pbsv_12888:HG2_Ill_GATKHCSBGrefine_8598:HG3_Ill_MetaSV_1025:HG2_Ill_MetaSV_934:HG4_Ill_MetaSV_983:HG4_Ill_GATKHCSBGrefine_8861:HG4_PB_HySA_18704:HG2_PB_PB10Xdip_6934:HG2_PB_PB10Xdip_6933:HG3_Ill_Spiral_13396:HG3_PB_pbsv_12569:HG4_PB_SVrefine2PBcRDovetail_6514:HG2_PB_SVrefine2Falcon1plusDovetail_2285:HG4_Ill_SVrefine2DISCOVARDovetail_9165:HG2_10X_SVrefine210Xhap12_9010:HG3_PB_SVrefine2Falcon1Dovetail_7848:HG2_PB_SVrefine2PBcRplusDovetail_2176:HG2_PB_SVrefine2PB10Xhap12_9294:HG2_PB_SVrefine2Falcon2Bionano_6335;NumClusterSVs=23;ExactMatchIDs=HG2_PB_PB10Xdip_6933:HG2_PB_PB10Xdip_6934;NumExactMatchSVs=2;ClusterMaxShiftDist=0.057971;ClusterMaxSizeDiff=0.0544928;ClusterMaxEditDist=0.275706;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=862;DistBack=-41;DistForward=5;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=289;REFWIDENED=12:1729873-1730161;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9965;PctRecOverlap=0.9977;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=1081.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:21:1:32:1/1:0:14:1:8:1/1:0:20:0/1:15:121:.:1036:.
chr12	2364959	HG2_PB_SVrefine2Falcon2Bionano_6340	C	CCCTGACCTTACTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACAGGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTTACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTACTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACAGGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAACCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAGTCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAGTCACACGATCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAGTCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAGTCACACGATCCTGACCTGACTAGTTTACAGTCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAGTCACACGATCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAGTCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAGTCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTTACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTTACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTTACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTAAATCACACGACCTGACCTGACTAGTTTACAATCACACAATCCTGACCTTGCTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACAGGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTTACTAGTTTACAACCACACGATCCTGACCTGACTAGTTTACAATCACACGACCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACAGGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACAGGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACATGATCCTGACCTTGCTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACAGGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTTACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACAAGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAATCACACTATCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTTACTAGTTTACAATCACACGACCCTGACCTTACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACGATCACATGACCCTGACCTGACTAGTTTACGATCACACGATCCTGACCTGACTAGTTTACGATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACAGGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAACCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACGACCACACGACCCTGACCTGACTAGTTTACGACCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAACCACACGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAGTCACATGATCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTGCTAGTTTACAATCACACTATCCTGACCTTACTAGTTTACAATCACAAGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACACGATCCTGACCTTACTAGTTTACAATCACAAGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2182:HG2_PB_PB10Xdip_7031:HG4_PB_pbsv_12881:HG3_PB_assemblyticsfalcon_5181:HG2_PB_assemblyticsPBcR_5014:HG3_PB_SVrefine2Falcon1Dovetail_7854:HG2_PB_SVrefine2Falcon1plusDovetail_2290:HG2_PB_SVrefine2PB10Xhap12_9300:HG2_PB_SVrefine2Falcon2Bionano_6340:HG4_PB_SVrefine2Falcon1Dovetail_7901;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6340;NumExactMatchSVs=1;ClusterMaxShiftDist=0.322164;ClusterMaxSizeDiff=0.322164;ClusterMaxEditDist=0.344772;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=5366;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=296;REFWIDENED=12:2364960-2365255;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9993;PctRecOverlap=0.9523;SizeDiff=-4;StartDistance=-254;EndDistance=-254;GTMatch=0;TruScore=98;MatchId=1082.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:1/1:0:13:1:20:./.:0:2:0:4:./.:1:11:1/1:0:158:.:5477:.
chr12	2648372	HG2_PB_PB10Xdip_7041	G	GAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCAAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGTTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGTTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGTTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGTTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGTTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGTTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGTTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGTTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGTTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTAAGGAGGGCTTCATAAAGATGCAGGCAGGGTTTAAGGACTTA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7904:HG3_PB_pbsv_12585:HG2_PB_PB10Xdip_7042:HG2_PB_pbsv_12900:HG2_PB_PB10Xdip_7041:HG3_PB_SVrefine2Falcon1Dovetail_7858:HG2_PB_SVrefine2Falcon1plusDovetail_2293:HG2_PB_SVrefine2PBcRplusDovetail_2185:HG2_PB_SVrefine2PB10Xhap12_9304:HG2_PB_SVrefine2Falcon2Bionano_6343;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_7041:HG2_PB_PB10Xdip_7042;NumExactMatchSVs=2;ClusterMaxShiftDist=0.224317;ClusterMaxSizeDiff=0.223667;ClusterMaxEditDist=0.263972;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1393;DistBack=-692;DistForward=317;DistMin=-692;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=699;REFWIDENED=12:2648367-2649065;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9993;PctRecOverlap=0.9986;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=1083.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:93:./.:0:0:0:0:./.:0:0:0:0:./.:0:0:0/1:11:25:.:2619:.
chr12	2681463	HG2_PB_SVrefine2PB10Xhap12_9305	T	TTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTTCTCTTCTTCCTCCTCCTCCTCCTCTCCTCCTCCTTCTCCTCTTCCTCCTCCTCCCCTCCTCCTTCTCCTCCTCGTCTTCCTCCTCCTCTCCTCCTTCTCCTCCTCTCCTCCTCCTTCTCCTCCTCCTGTTCCTCCTCCTCCTTTCCTCCTCCTCCTGTTCCTCCTCCTCCTCTCCTCCTCCTCCTCTCCTCCTCCTTCTCCTCTTCCTCCTCCTCCTCTCCTCCTCCTCCTCCTCCTTTTCCTCCTCCTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2294:HG2_PB_PB10Xdip_7044:HG2_PB_PB10Xdip_7043:HG2_PB_HySA_23431:HG2_PB_pbsv_12901:HG3_PB_pbsv_12586:HG2_PB_SVrefine2PBcRplusDovetail_2186:HG4_PB_pbsv_12884:HG2_PB_SVrefine2PB10Xhap12_9305:HG2_PB_HySA_23430:HG3_PB_HySA_19434:HG3_PB_SVrefine2PBcRDovetail_6090:HG4_PB_SVrefine2Falcon1Dovetail_7905:HG2_PB_SVrefine2Falcon2Bionano_6344:HG4_PB_SVrefine2PBcRDovetail_6524:HG3_PB_SVrefine2Falcon1Dovetail_7859;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6344:HG2_PB_SVrefine2PB10Xhap12_9305:HG2_PB_SVrefine2PBcRplusDovetail_2186;NumExactMatchSVs=3;ClusterMaxShiftDist=0.220532;ClusterMaxSizeDiff=0.220532;ClusterMaxEditDist=0.26691;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=289;DistBack=-731;DistForward=-1;DistMin=-731;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=754;REFWIDENED=12:2681464-2682217;PctSeqSimilarity=0.979;PctSizeSimilarity=0.9619;PctRecOverlap=0.7301;SizeDiff=11;StartDistance=-73;EndDistance=-73;GTMatch=0;TruScore=89;MatchId=1084.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:38:./.:0:3:0:0:./.:3:36:2:20:./.:0:4:./.:.:.:.:.:.
chr12	2792016	HG2_Ill_MetaSV_936	A	AACACACACACACACACCACACAAACACAACACACACACACACAAACAACACACAACACACACAAACACAACACAGCACACAACACACACAAACACCACACAACACACACACAACACACGCACACACACAAACATACGCGTGCACAAACACGCACCCACACACACCAAACACACGCATACACACACAACATACACGTGTGCATACAAACACAATACACACACAAAACAGCACACACAACACGCACCCACACACCACACAAACACAAAACACACGCACCCACACACACACAAACACACCACACACACAGCACACACACAAAACACACACACCCACACACACATACACAAACACACCACACAAAACACACCACACATACAACACACATGTGCACGCACACAATACACAACACACACAACACACACACAAACGCACGCACACACACATGCGCGCGCACACAAACAATACACACACACAACATGCGCGTGCACACAAACAATACACACACACGTGCACGCACACAAACACAATACACACAACACACCACACAACCCACACACAAACGCGCACACACACACCACACACAACACACACACAACACAAACGCGCACGCAAACACACAACACACAAACACGCGTGCACACAAACACCACACACACACCACACAAAACACAACACAAACACAAACACAACACAGCACAAACGCGTGCACACACAACACAGCACACACACAAACGCGCACACAAACACAACACATACACGCACGCCCACACAACACAAACACCACACGCACGCACAAACACCACACACACAACACACAAACACACCACACAACACACACACAACACACATACACCACACACACCACACAACACAAACACAGCACACACAAACGCGCACACACACACAAAACACACCACACACAGAAACACACACACAAAACACACACAGCACAACACGCACACAACACAAACGCGCACACACACATGCACGTGCACACAAATACACACAACACACACAACACACAACACAAACACACATGCGCACGCACACAAATACAACACACAGCACACAACACACAAACGCACACACACAACACACAATACACAAACACGCACGCACACACAAACAACACGCGCGTGCACACACACACCACACGCAATACACACGCACCCACACACCACACACACAACACACACATACACACAAAACACAACACACACAACACAACCACACAACACACACACACAAAACGCACAAACATACATGCACGCACACAATGCACGCACACACACAAACACACACACACACACACAACACACGCACCCACACACAACACACACACCACACAGACACACACACAGAAACACACACAACACACAAACACACAAACACAACACACAAACATGCGCGCACACACACACAAAACACACACAGACACACACAACACACAACACAGAC	20	PASS	ClusterIDs=HG4_PB_pbsv_12886:HG4_PB_HySA_18722:HG3_PB_pbsv_12587:HG2_PB_pbsv_12902:HG4_PB_SVrefine2PBcRDovetail_6525:HG2_PB_assemblyticsPBcR_5019:HG3_PB_assemblyticsfalcon_5187:HG2_PB_PB10Xdip_7045:HG2_PB_PB10Xdip_7046:HG2_PB_SVrefine2PBcRplusDovetail_2187:HG4_Ill_MetaSV_985:HG2_PB_SVrefine2Falcon2Bionano_6345:HG2_PB_SVrefine2Falcon1plusDovetail_2295:HG2_Ill_SVrefine2DISCOVARplusDovetail_2526:HG4_Ill_SVrefine2DISCOVARDovetail_9170:HG2_PB_SVrefine2PB10Xhap12_9306:HG3_PB_SVrefine2PBcRDovetail_6091:HG2_Ill_MetaSV_936:HG3_Ill_SVrefine2DISCOVARDovetail_9399:HG4_PB_SVrefine2Falcon1Dovetail_7906:HG3_PB_SVrefine2Falcon1Dovetail_7860;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_MetaSV_936;NumExactMatchSVs=1;ClusterMaxShiftDist=0.138552;ClusterMaxSizeDiff=0.138552;ClusterMaxEditDist=0.235213;PBcalls=16;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=1458;DistBack=8539;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=67;REFWIDENED=12:2792017-2792083;PctSeqSimilarity=0.9914;PctSizeSimilarity=0.9952;PctRecOverlap=0.9945;SizeDiff=7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1085.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:31:0:25:1/1:0:83:7:133:1/1:0:23:1/1:7:245:.:1630:.
chr12	2939073	HG3_Ill_GATKHCSBGrefine_8509	A	ATCTCTACTAAAAATACAAAATTAGCCAGGCGTGGTGGCATTTTCCTGTAATCCCAGCTACTCGGGAAGCCGAGGCAGAAGAATTGCTTGAATCTAGGAGGCAGAGGTTGCGGTGAGCCAAGATCACACCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAGGGCTCGGAGCAGTGGCTCACGCCTGTAATCCCAGCACCAGGAATTTGAGACCAGCCTGGCCAACCTGGTGAAACCCTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2529:HG2_PB_HySA_23438:HG3_Ill_MetaSV_1030:HG3_Ill_GATKHCSBGrefine_8509:HG2_Ill_MetaSV_937:HG2_Ill_GATKHCSBGrefine_8604:HG3_PB_pbsv_12589:HG3_PB_HySA_19438:HG2_PB_SVrefine2PB10Xhap12_9309:HG2_PB_SVrefine2PBcRplusDovetail_2190:HG2_PB_SVrefine2Falcon1plusDovetail_2298:HG2_PB_pbsv_12905;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8604:HG2_Ill_MetaSV_937:HG3_Ill_GATKHCSBGrefine_8509:HG3_Ill_MetaSV_1030;NumExactMatchSVs=4;ClusterMaxShiftDist=0.145383;ClusterMaxSizeDiff=0.145383;ClusterMaxEditDist=0.27156;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=263;DistBack=-138;DistForward=2;DistMin=-138;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=218;REFWIDENED=12:2939033-2939250;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1086.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:0|1:26:0:1:38:./.:0:4:6:0:0/1:27:8:./.:.:.:.:.:.
chr12	3048698	HG4_PB_SVrefine2PBcRDovetail_6528	A	AAAGAGCAATAGTTTGCCCCTTTTGGAATGATCTCTGAATATATAAAACACACACACAAAGAGCAATAGTTTGCCCCTTTTGGAACGACCCCTGAATATATAAAACACACACACG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2299:HG4_PB_HySA_18727:HG3_PB_HySA_19440:HG4_PB_pbsv_12889:HG2_PB_HySA_23440:HG2_PB_PB10Xdip_7051:HG2_PB_pbsv_12907:HG2_PB_PB10Xdip_7050:HG4_PB_SVrefine2PBcRDovetail_6528:HG4_PB_SVrefine2Falcon1Dovetail_7907:HG3_PB_SVrefine2PBcRDovetail_6093:HG2_PB_SVrefine2PBcRplusDovetail_2191:HG2_PB_SVrefine2PB10Xhap12_9311:HG2_PB_SVrefine2Falcon2Bionano_6347;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2299:HG4_PB_SVrefine2PBcRDovetail_6528:HG4_PB_SVrefine2Falcon1Dovetail_7907:HG3_PB_SVrefine2PBcRDovetail_6093:HG2_PB_SVrefine2PBcRplusDovetail_2191:HG2_PB_SVrefine2PB10Xhap12_9311:HG2_PB_SVrefine2Falcon2Bionano_6347;NumExactMatchSVs=7;ClusterMaxShiftDist=0.119149;ClusterMaxSizeDiff=0.093617;ClusterMaxEditDist=0.347107;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=114;DistBack=-114;DistForward=-1;DistMin=-114;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=280;REFWIDENED=12:3048699-3048978;PctSeqSimilarity=0.9825;PctSizeSimilarity=0.9825;PctRecOverlap=0.4957;SizeDiff=2;StartDistance=-57;EndDistance=-57;GTMatch=0;TruScore=82;MatchId=1087.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:1:16:2:23:./.:3:0:4:0:0/0:22:0:./.:.:.:.:.:.
chr12	3427785	HG2_Ill_150bpfermikitraw_16179	T	TGTGTTAGCCCAAGAAAGTTTCTGCAGCCGTCTTTTTGGTTTAAACAATCAAATGCTCA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_16179:HG4_Ill_manta_3037:HG3_Ill_manta_2918:HG4_Ill_GATKHC_20630:HG4_Ill_GATKHCSBGrefine_8868:HG3_Ill_GATKHC_20500:HG3_Ill_GATKHCSBGrefine_8511:HG2_Ill_GATKHC_20639:HG2_Ill_GATKHCSBGrefine_8606:HG2_PB_HySA_23447:HG2_PB_pbsv_12910:HG4_PB_pbsv_12893:HG4_Ill_scalpel_11866:HG3_PB_HySA_19448:HG4_PB_HySA_18739:HG4_Ill_Krunchall_17842:HG4_Ill_250bpfermikitraw_17027:HG3_Ill_Krunchall_17185:HG3_Ill_250bpfermikitraw_16698:HG3_Ill_150bpfermikitraw_16214:HG2_Ill_scalpel_12154:HG2_Ill_Krunchall_17527:HG2_Ill_250bpfermikitraw_17178;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16179:HG4_Ill_scalpel_11866:HG4_Ill_Krunchall_17842:HG4_Ill_250bpfermikitraw_17027:HG3_Ill_Krunchall_17185:HG3_Ill_250bpfermikitraw_16698:HG3_Ill_150bpfermikitraw_16214:HG2_Ill_scalpel_12154:HG2_Ill_Krunchall_17527:HG2_Ill_250bpfermikitraw_17178;NumExactMatchSVs=10;ClusterMaxShiftDist=0.175439;ClusterMaxSizeDiff=0.175439;ClusterMaxEditDist=0.245614;PBcalls=5;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=2543;DistForward=52;DistMin=52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=12:3427786-3427843;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1088.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:68:22:./.:55:9:22:12:0|1:6:0:0:16:0/1:26:32:./.:.:.:.:.:.
chr12	3877531	HG3_Ill_scalpel_12368	G	GACCAACATGGAGAAACCTCGTCTCTACTAAAAATACAAAATTAGCCGGGCATAGTGGTGCATGCCTGTAATTCCAGCACTTTGGGAAGCCGAGGCAGGCGGATCACCCAAGGTCGGGAGTTCGAGACCAGCCTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2195:HG2_PB_SVrefine2Falcon1plusDovetail_2302:HG2_PB_pbsv_12912:HG3_PB_pbsv_12598:HG3_PB_HySA_19456:HG4_PB_pbsv_12894:HG4_PB_HySA_18744:HG4_Ill_GATKHC_20635:HG4_Ill_GATKHCSBGrefine_8869:HG3_Ill_scalpel_12368:HG3_Ill_GATKHC_20505:HG3_Ill_GATKHCSBGrefine_8514:HG3_Ill_150bpfermikitraw_16219:HG2_Ill_GATKHC_20643:HG2_Ill_GATKHCSBGrefine_8608:HG2_PB_HySA_23451:HG2_PB_PB10Xdip_7120:HG2_PB_PB10Xdip_7119:HG4_PB_HySA_18743:HG4_PB_SVrefine2Falcon1Dovetail_7910:HG3_PB_SVrefine2PBcRDovetail_6098:HG3_Ill_SVrefine2DISCOVARDovetail_9405:HG2_PB_SVrefine2PB10Xhap12_9314:HG2_Ill_SVrefine2DISCOVARplusDovetail_2535:HG2_10X_SVrefine210Xhap12_9027:HG4_PB_SVrefine2PBcRDovetail_6530:HG2_PB_SVrefine2Falcon2Bionano_6349;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8608:HG2_Ill_GATKHC_20643:HG3_Ill_150bpfermikitraw_16219:HG3_Ill_GATKHCSBGrefine_8514:HG3_Ill_GATKHC_20505:HG3_Ill_scalpel_12368:HG4_Ill_GATKHCSBGrefine_8869:HG4_Ill_GATKHC_20635;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0724638;ClusterMaxSizeDiff=0.057971;ClusterMaxEditDist=0.304348;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=134;DistBack=-222;DistForward=178;DistMin=-222;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=401;REFWIDENED=12:3877327-3877727;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1089.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:1/1:1:25:2:23:./.:1:17:1:15:1/1:1:26:./.:.:.:.:.:.
chr12	4742905	HG2_PB_SVrefine2Falcon2Bionano_6351	T	TCAGTAGTTTTTTTTTTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAACAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAAGTTTTCTTAGTACAGAACCAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACTGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTAGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCCCACCTCCCGGATGGGGCGGCTGGCTGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCCAGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGACCCCCCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCCAGGCGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGCCGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCTCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTTCCAGACGGGGTGGCTGCCAGGCGGAGGGGCTCCTCACTTCCCAGACGGGGTGGCTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCTAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACAGGGTTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGCGGGGAAGAGGCGCTCCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGAGGCTCCTCATATCCCAGACGATGGGGGGGCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCTGGGCAGAGGCTGCAATCTCGGCACTTTGGGGGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCGGGGAGAGGGGAGAGGGGAGAGGGGAGAGGGGGAGGGGGAGGGGGAGGGGGGAGGGGGAGGGGGAGGGGAGAGGGAGAGGGGAGAGGGGAGAGGGGAGAGCCTTCAGTAGTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG2_PB_HySA_23463:HG2_PB_pbsv_12915:HG2_PB_PB10Xdip_7463:HG4_PB_pbsv_12897:HG2_PB_SVrefine2Falcon2Bionano_6351:HG2_PB_SVrefine2PBcRplusDovetail_2196:HG2_PB_SVrefine2PB10Xhap12_9316;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6351;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0371043;ClusterMaxSizeDiff=0.030248;ClusterMaxEditDist=0.242791;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2490;DistBack=8913;DistForward=1733;DistMin=1733;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=12:4742906-4742915;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9936;PctRecOverlap=0.9936;SizeDiff=-16;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1090.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:54:0|1:51:5:4:32:0|1:31:0:0:8:0/1:23:15:0/1:97:251:.:2564:.
chr12	5590649	HG3_Ill_MetaSV_1034	G	GCACATACAAACAGAATAACACCACACACACACCACAGACACAGAAATAACACCACACACACATGCACATACACACACCACATACACACAGAATAACACCACACACACATGCACACACACACAGAATAACACGATACACACATGCACATACACCACAGACACACACAGAATAGCGCGACACACGTGCACACATAGACATACACACACCACACACACAGAATAACACCAGAAACATGCACACACAGACATACACACACCACACACGGAATAACACCACCCACACATGCGCACACACACAGAATAACACCACACACACGCACATACACACACCACACACAGAGTAACACACACGCACACACACAGATATACACCACACACAGAATACCACCACACACACATGCACACATGCATACAGACATACATCACACACACAATAACATAACACACATGCACACAGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7917:HG4_PB_HySA_18765:HG4_Ill_MetaSV_986:HG4_Ill_GATKHCSBGrefine_8876:HG3_Ill_MetaSV_1034:HG3_Ill_GATKHCSBGrefine_8520:HG2_Ill_manta_3573:HG2_Ill_MetaSV_938:HG2_Ill_GATKHCSBGrefine_8613:HG2_PB_pbsv_12921:HG2_PB_PB10Xdip_7525:HG2_PB_PB10Xdip_7524:HG2_Ill_breakscan11_4353:HG4_PB_pbsv_12903:HG2_PB_SVrefine2PBcRplusDovetail_2200:HG2_PB_SVrefine2PB10Xhap12_9320:HG2_PB_SVrefine2Falcon2Bionano_6355:HG2_PB_SVrefine2Falcon1plusDovetail_2309:HG2_Ill_SVrefine2DISCOVARplusDovetail_2541;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8613:HG2_Ill_MetaSV_938:HG2_Ill_manta_3573:HG3_Ill_GATKHCSBGrefine_8520:HG3_Ill_MetaSV_1034:HG4_Ill_GATKHCSBGrefine_8876:HG4_Ill_MetaSV_986;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0635593;ClusterMaxSizeDiff=0.0635593;ClusterMaxEditDist=0.20625;PBcalls=10;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=457;DistBack=-1;DistForward=260;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=428;REFWIDENED=12:5590508-5590935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1093.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:0:13:0:23:./.:8:224:19:288:1/1:0:22:1/1:2:113:.:.:.
chr12	5747637	HG2_Ill_MetaSV_939	A	ATGATCTGCCCGCCTTGGCCTCCCAGCACTGATTCTTATAACTACCATGCAAGATATGCCTTTAATAGGTGAGATTTCATGATGATTTAGGATTTGAACCCTGCTCCATGGTTCCAAAGTCTACAATCCCATCCTGACATTAGAACTCAGGTTTTCCAGCACTACATCTAGTACTATTTCCACCACTTGTGGTTACATTATTGATTTTCTTTTTCTTTTTCTTTTTTTGTTTGAGATAGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCGATCTCAGCTCACCGCAACCTCTGCCTCCCTGGTTCAAGCAATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGCGCCACCACGCCTGGCTACTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCCAACTCTCGACCTCAAGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7919:HG4_PB_pbsv_12906:HG2_Ill_GATKHCSBGrefine_8614:HG4_Ill_GATKHCSBGrefine_8878:HG4_PB_HySA_18773:HG4_Ill_MetaSV_987:HG2_Ill_MetaSV_939;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_MetaSV_939:HG4_Ill_MetaSV_987;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0502732;ClusterMaxSizeDiff=0.0459016;ClusterMaxEditDist=0.194595;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=451;DistBack=65;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=244;REFWIDENED=12:5747394-5747637;PctSeqSimilarity=0.9978;PctSizeSimilarity=0.9978;PctRecOverlap=0.9978;SizeDiff=1;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=1094.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:20:0|1:36:2:1:18:0|1:32:0:0:6:0/1:20:5:0/1:8:32:.:.:.
chr12	6032425	HG4_PB_assemblyticsfalcon_5111	C	CACACACACACACACACACACGCACACACACATGCACACATACACACACGCATACACACACAT	10	PASS	ClusterIDs=HG3_PB_pbsv_12612:HG2_PB_PB10Xdip_7573:HG4_PB_assemblyticsfalcon_5111:HG4_PB_pbsv_12909:HG3_PB_HySA_19471;NumClusterSVs=5;ExactMatchIDs=HG4_PB_assemblyticsfalcon_5111;NumExactMatchSVs=1;ClusterMaxShiftDist=0.149254;ClusterMaxSizeDiff=0.149254;ClusterMaxEditDist=0.244604;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=62;DistBack=6;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=279;REFWIDENED=12:6032178-6032456;PctSeqSimilarity=0.9683;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1095.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:./.:0:0:0:0:./.:0:0:0:0:./.:2:16:./.:.:.:.:2963:.
chr12	6040649	HG4_PB_SVrefine2Falcon1Dovetail_7922	T	TATAAGGAAAGAAGGCAGACGAGTGAGGAAAGAAGACAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGCAGACCAGTAAGGAAGAAGGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGCAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGCAGACGAGTGAGGAAAGAAGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGCAGACGAGTGAGGAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGACTAGAAAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAAGGTAGACGAGTGAGGAAAGAAGACAGAAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGCAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGCAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGCTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAAAAAGAGGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGCAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGGTAGACTAGTAAGGAAGGAAGACTGGTAAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGGTAGACTAGTAAGGAAGGAAGACTGGTAAAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGCAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAGTGACTAATAAGGAAAGAAGGCAGACGAGTGAGGAAAGAAGGTAGACTAGTTAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGATAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGCAGACGAGTGAGGAAAGAAGTAGACTAGTAAGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7922:HG2_PB_pbsv_12928:HG2_PB_PB10Xdip_7575;NumClusterSVs=3;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_7922;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0650224;ClusterMaxSizeDiff=0.064275;ClusterMaxEditDist=0.144917;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2716;DistBack=1320;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1230;REFWIDENED=12:6040650-6041879;PctSeqSimilarity=0.9918;PctSizeSimilarity=0.9949;PctRecOverlap=0.9648;SizeDiff=-14;StartDistance=-89;EndDistance=-89;GTMatch=1;TruScore=98;MatchId=1096.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:9:0:12:./.:0:0:0:0:./.:7:2:0/1:14:66:.:2963:.
chr12	6414587	HG3_Ill_SVrefine2DISCOVARDovetail_9420	G	GCTCATGCCTGTAATCCCAGCACTTTGGGAGGCGGAGGCAGGCCAATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTTCAAAAAAAAAAAAAAGAAACCGACACAAAATGGATGCAAAGTCAGAGGCAGACATCTGTCCTACATACTCACAGTGGTCTCCTGTTTGGCAGCTGGCAGCTGGACCAAATGTCCGCTCTAAAGCCTTGTTAGGTATAGGAATTGACCCAGCTCTTCCACATCCTGGCTTTGTGACCTTGGTGAAGCTATTTTACCTCTGAGATTCAGTCTTCCACCAACTAAGTAGGATGATACCGGTAGCATCTGCCTCTTGGGTTGTTGTAAGGAGAAATGGAATGATGTCTTCTGAGCATCCCACTCAGTGCCTGGTGCACAGGGTGCTTCCTCAGACCTTGTTGTCTGCCCATATGAACACAAACTGAGAACACAGTCTCTGAAGGAAGGCAAAAGGATCCAGGGCTTCTAAACCTGCTAAAATGACTGAACTGTGGTTCAGTTATCCAAAGAGGGGTTCATGATACAGAGAAGCGTATTCCCCAGAGTACGAGGAAATTAAATTTAAGCTGGAGGTATTTGGGTCAGAGATGACAAAGAACTTCCTGAAAGTCAGGGTTGTCAAATTAAATTAGTAATGATGATTTAAGACTGTCGTGCTGCTAGTGTCTACTCTAACAGGAGAATACCAGCTCATCTGCCTGGGCTAGGCAAGGTGTGCCATAATGAGATGGACCCAGACAGTCAGCCACCCTGGGCAAATGGGCCTCGAAATACATGTGCCCCAAGTGAGGGCTGGCTGTGACCCCGGACTAAGTGACAAGGGCCACAGAGCTAGTAGAAGTTGGCCATGGGGGAAGGGCTGTTCTAGCTTTGAAGACATTTGCAAGGGTTGACACAGAGCCTTAAACTGCCTAGGTGCATGGATATTTGCGTCATCCTCAGGTGGAAGAAACCTGAGAGGACCCAGCATCAGCGCAGACCTGAGGGAGGAAATCAAATGACCACTGGAAGGAAGGGGGCTTGAAGGAAGTGACCCCACTCACTGAGCAGAGCCACTTGAACAAAGGCATTGACCCTGGAAGAAGCATGGCTGGAGGTGTTGGGCACAGGCAGGAGCCATCCGTGAAGGGCATTAGCCTGCACTCCTGTGTGGGTAGAAGTGTTGGACTACAAACCACTTGGGGCCCATTAGACTCAGGAAGGCCAGGCCTCGGAGGCTTGTCCGCTCCTGCCCCCAAAGACCAAGACAATGCAATGAGGCTTCATTGCATTTCCAGGGGAGGCCACTAGGGGAGACCATGGCTGTCAGGTGCCATGGGGCAAAGACAGAAGGCCAAGAAATAAAATGGCTCCGGACATCTTTCACTTTGGATATGCCCTTGTCATTCCTGAAGGCCTGAGCAGCCTGGAAAGAGAGAAGGATGGGGAACATTTCCACAGCTGGGAAATTCAGTGCCATGGCCTCAACGTCACCTGCTAAGGAACCTGCTGGGGCTCCTGAGCCACAAAGGCCCTATAGGTCTGGTTAAGATTCCACAGCCCTTGGCTTGGCGTGGTCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2313:HG2_PB_pbsv_12932:HG4_PB_pbsv_12916:HG3_PB_pbsv_12618:HG3_PB_HySA_19485:HG3_PB_HySA_19484:HG2_PB_PB10Xdip_7605:HG2_10X_SVrefine210Xhap12_9042:HG4_Ill_SVrefine2DISCOVARDovetail_9182:HG3_Ill_SVrefine2DISCOVARDovetail_9420:HG2_PB_SVrefine2PBcRplusDovetail_2207:HG2_PB_SVrefine2PB10Xhap12_9328:HG2_Ill_SVrefine2DISCOVARplusDovetail_2548:HG4_PB_SVrefine2Falcon1Dovetail_7925:HG4_PB_SVrefine2PBcRDovetail_6536:HG2_PB_SVrefine2Falcon2Bionano_6360;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2548:HG2_PB_SVrefine2PB10Xhap12_9328:HG2_PB_SVrefine2PBcRplusDovetail_2207:HG3_Ill_SVrefine2DISCOVARDovetail_9420:HG4_Ill_SVrefine2DISCOVARDovetail_9182;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0520199;ClusterMaxSizeDiff=0.0520199;ClusterMaxEditDist=0.152884;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=1760;DistBack=2807;DistForward=18850;DistMin=2807;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=280;REFWIDENED=12:6414588-6414867;PctSeqSimilarity=0.997;PctSizeSimilarity=1;PctRecOverlap=0.9637;SizeDiff=0;StartDistance=-64;EndDistance=-64;GTMatch=0;TruScore=98;MatchId=1097.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:8:0:9:./.:0:3:0:1:1/1:0:29:./.:15:199:.:1788:.
chr12	6471877	HG2_PB_SVrefine2Falcon2Bionano_6361	A	ACTCTGTCACTCAGGCTGGAGTACAGTGGTGTGATCAAGGCTCACAGCAGTCTCCATCTCCCGAGTTCAAGCAATTCTCCCATCTCAGCCTCCTAAGTAGCTGGAACTACAGGCTTGTGCCACCACATGGGCTAATTTTTGTATTTTTTTTTTGTAGAGATGGGGTTTCACTATGTTGACCAGGCTGGTCTAAAACTCCTGGGCTCAGGTGATCTGCACGCCTAGGCCTCCCAAGTGCTAGGATTACAGGCGGGAGTCACTGCACCCAGCCTTATTTTATATTAAAAAAAAAAATTGGGACGGGTGCGGTGGCTCACTCCTGTAATCGGGCACTTTGGGAGGCCGAGGCGGGCAGATCACCTGAGGTCGGGAGCTGGAGGCCAGCCTGACCAACATGGAGAAACCCCATCTCTACTAAAAATATTAAAAATTAGCCAGGCATGGTGGTTCATGACTGTAATCCCAGCTAGTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGCGCCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCGTCTCAAAAAAAAAAAAAAAAAATTAAGTTTCCTTTTTTTTGTTTGTTTTTTGAGATGGAGTCTTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7926:HG3_PB_pbsv_12619:HG2_PB_pbsv_12933:HG2_PB_PB10Xdip_7610:HG4_PB_pbsv_12917:HG4_PB_HySA_18785:HG3_Ill_manta_2923:HG3_Ill_MetaSV_1037:HG3_Ill_GATKHCSBGrefine_8522:HG2_Ill_MetaSV_943:HG4_Ill_MetaSV_990:HG4_Ill_GATKHCSBGrefine_8881:HG2_PB_HySA_23487:HG3_Ill_Spiral_13425:HG2_10X_SVrefine210Xhap12_9043:HG4_PB_SVrefine2PBcRDovetail_6537:HG4_Ill_SVrefine2DISCOVARDovetail_9183:HG2_PB_SVrefine2Falcon2Bionano_6361:HG2_Ill_SVrefine2DISCOVARplusDovetail_2549:HG2_PB_SVrefine2PBcRplusDovetail_2208:HG2_PB_SVrefine2PB10Xhap12_9329:HG3_Ill_SVrefine2DISCOVARDovetail_9421:HG2_PB_SVrefine2Falcon1plusDovetail_2314;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2549:HG2_PB_SVrefine2Falcon2Bionano_6361:HG4_Ill_SVrefine2DISCOVARDovetail_9183:HG4_PB_SVrefine2PBcRDovetail_6537;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0974513;ClusterMaxSizeDiff=0.095952;ClusterMaxEditDist=0.264179;PBcalls=12;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=640;DistBack=19065;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=270;REFWIDENED=12:6471878-6472147;PctSeqSimilarity=0.9699;PctSizeSimilarity=0.9953;PctRecOverlap=0.6474;SizeDiff=3;StartDistance=-224;EndDistance=-224;GTMatch=0;TruScore=87;MatchId=1098.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:1/1:0:30:0:42:./.:0:8:1:6:1/1:0:12:1/1:5:88:.:.:.
chr12	6512726	HG2_PB_SVrefine2PB10Xhap12_9330	A	AATACAAAAATTAGCCAGGTATGTTGGTGGGCATCTGTAATTCCAGCTACTCGGGAGGCTGAGGCACAAGAATTGCTTGAACTTGGGAGATGGAGGTTGCAGTGCGCCAAGATTGCATCACTGCACTCCAGCATGGGTGACAGAGCAAGACTCTGTCTCAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATTGGGCTATTTTGTTGTTGTTGTTTGTTTGCTTGTTTGTTTTTGAGATGGAGTCTCGCTTTCTCACCAGGCTGGAGTACAGTGGCATGATCTCAGGTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTTGTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACATGCCACCACACCCAGCTACTTTTTGTATTTTTAGTAGAGACGGGGTTTTACCATGTTATCCAGGATGGTCTCAATCTCCTGACCTCGTGATTTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGATCCATGGTGCCTGGTTGGGCCATTTGTTTTCTTATTCTGTTTTAAGAAGTCTTTATTCTGGGCGGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCCGGTGGATCGCGAGGTCAGGAGATTGAGACCAGCCTGGCCAATATGGTGAAACCCCATCTCTACTAAAAT	20	PASS	ClusterIDs=HG3_PB_pbsv_12620:HG2_PB_HySA_23490:HG4_PB_pbsv_12918:HG2_PB_pbsv_12934:HG2_PB_PB10Xdip_7616:HG2_PB_PB10Xdip_7615:HG3_Ill_GATKHCSBGrefine_8523:HG2_Ill_GATKHCSBGrefine_8617:HG4_Ill_GATKHCSBGrefine_8882:HG3_Ill_MetaSV_1038:HG2_Ill_breakscan11_4354:HG4_PB_HySA_18789:HG2_PB_HySA_23489:HG3_Ill_SVrefine2DISCOVARDovetail_9422:HG2_PB_SVrefine2PBcRplusDovetail_2209:HG2_10X_SVrefine210Xhap12_9045:HG4_PB_SVrefine2PBcRDovetail_6538:HG4_Ill_SVrefine2DISCOVARDovetail_9184:HG2_PB_SVrefine2PB10Xhap12_9330:HG2_Ill_SVrefine2DISCOVARplusDovetail_2550:HG2_PB_SVrefine2Falcon2Bionano_6362:HG4_PB_SVrefine2Falcon1Dovetail_7927:HG2_PB_SVrefine2Falcon1plusDovetail_2315:HG2_PB_HySA_23488:HG4_PB_HySA_18788;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2550:HG2_PB_SVrefine2PB10Xhap12_9330:HG4_Ill_SVrefine2DISCOVARDovetail_9184:HG4_PB_SVrefine2PBcRDovetail_6538;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0438783;ClusterMaxSizeDiff=0.0410474;ClusterMaxEditDist=0.217207;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=696;DistBack=2863;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=196;REFWIDENED=12:6512727-6512922;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9986;PctRecOverlap=0.9928;SizeDiff=1;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=1099.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:79:1/1:1:36:1:36:./.:0:5:0:2:1/1:0:11:1/1:6:115:.:.:.
chr12	6613354	HG2_Ill_150bpfermikitraw_16207	T	TATATATATACACATATATATATACACATATATATACACATATATATATACACATATATATACACATATATATATACACATATATATACAC	20	PASS	ClusterIDs=HG4_PB_pbsv_12921:HG2_PB_SVrefine2Falcon2Bionano_6365:HG2_Ill_SVrefine2DISCOVARplusDovetail_2552:HG2_10X_SVrefine210Xhap12_9047:HG2_Ill_GATKHCSBGrefine_8622:HG4_PB_HySA_18793:HG2_PB_pbsv_12937:HG4_Ill_Krunchall_17871:HG4_Ill_250bpfermikitraw_17055:HG2_Ill_250bpfermikitraw_17206:HG2_Ill_150bpfermikitraw_16207;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16207:HG2_Ill_250bpfermikitraw_17206:HG4_Ill_250bpfermikitraw_17055:HG4_Ill_Krunchall_17871;NumExactMatchSVs=4;ClusterMaxShiftDist=0.318182;ClusterMaxSizeDiff=0.318182;ClusterMaxEditDist=0.318182;PBcalls=4;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=90;DistBack=15;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=61;REFWIDENED=12:6613343-6613403;PctSeqSimilarity=0.9794;PctSizeSimilarity=0.9574;PctRecOverlap=0.9368;SizeDiff=-4;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=95;MatchId=1100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:0|1:27:1:0:20:./.:2:10:16:0:0/1:30:15:./.:.:.:.:.:.
chr12	7002378	HG2_PB_SVrefine2Falcon2Bionano_6366	A	AGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATAGTGAAACCCGGTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCATGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGACGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAGTAAGCCGAGATCAGGCCACTGCACTCCAGCCTGGGTGACCAGAGCGAGACTCCATCTCAGAAAATAAATAAATAAATAATAAATAAATAAAAGCAGAGTTAGAGGAAAAGATTGAGAATTTGGTTTTGGACATGTTGAGTTTGAGATGTCTGTGCCTCATATAAATGGAGAAATGAAGTGGGAGGTTAGATGTATGAGCCTGGGGCTCAGAAAAAAGTTCTCGGTTGGAGATAGAAATTTGGGATTCATGGCTGGGTGTGGTGGCTTACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCACCTGAGGATGGGAGTTCAAGATCAGCCTGGCCAACATGGCAAAACCCTATCTCTGCCAAAAATACAAAAACAACCCGGGCGTGGTGGCAGGTGCATGTAATCCCAGCTACTCAGGAGGCTGAGGGAGGAGAACTGCTTGAACCTGGAAGGCAGAGGTTGTAGTGAACTGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAAAGTAACTCCGTCTCAAAAAAAAAAAAAAAAAAGGCTGGATGCGGTGGCTCACATTTGTAATTCCAGCACTTTGGGAGGCCAAGGCAGGCGGATCACAAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTACCCCAGCATGGTGGTGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAGAATGACATGTTTTTTTGTTGTTGTTTTGTTTTGTTTTTGTTTTTGTTTTTTTTGAGACAGATTCTTGCTCTGTTGCCCAGGCTGGAGTTCAGTGGTGCAATCTCAGCTCATTGGAAACTGTGCCTCCTGGGTTCAAGCTATTCTTCTGCCTCAGCCTCCCTAGTTGCTGGGATTATAGGCACGCACCACCACACCCCACTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGCTAGTCTGGTCTCGAACTCCTGACCTCTGGTGATCCACCTGCCTTGGCAGCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCCGACCAGAATCTTGAGAGTATAATTTGAATGTGGCCGCGTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9049:HG2_PB_pbsv_12939:HG3_PB_pbsv_12624:HG4_PB_pbsv_12923:HG2_PB_PB10Xdip_7630:HG2_PB_PB10Xdip_7629:HG4_PB_HySA_18794:HG4_PB_SVrefine2Falcon1Dovetail_7930:HG4_PB_SVrefine2PBcRDovetail_6541:HG2_PB_SVrefine2Falcon1plusDovetail_2318:HG4_Ill_SVrefine2DISCOVARDovetail_9190:HG3_Ill_SVrefine2DISCOVARDovetail_9425:HG2_PB_SVrefine2PBcRplusDovetail_2211:HG2_PB_SVrefine2PB10Xhap12_9333:HG2_PB_SVrefine2Falcon2Bionano_6366:HG2_Ill_SVrefine2DISCOVARplusDovetail_2555;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9049:HG3_Ill_SVrefine2DISCOVARDovetail_9425:HG2_PB_SVrefine2PBcRplusDovetail_2211:HG2_PB_SVrefine2PB10Xhap12_9333:HG2_PB_SVrefine2Falcon2Bionano_6366:HG2_Ill_SVrefine2DISCOVARplusDovetail_2555;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0651537;ClusterMaxSizeDiff=0.0644217;ClusterMaxEditDist=0.177587;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1324;DistBack=14311;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=278;REFWIDENED=12:7002379-7002656;PctSeqSimilarity=0.9947;PctSizeSimilarity=1;PctRecOverlap=0.9238;SizeDiff=0;StartDistance=-101;EndDistance=-101;GTMatch=0;TruScore=97;MatchId=1101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:1:37:0:12:./.:0:0:0:0:1/1:0:13:./.:21:211:.:1374:.
chr12	7059062	HG2_PB_SVrefine2PB10Xhap12_9335	C	CACCTCCTGAGAAGCTGGGATTACAGGCATGTGCCACCACACCCGGCTAATCTTTGTATTTTTAGTAGAGTTGGGGTTTCACTATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCGCGCCTGGCCTGGTTTTTAATTTTTTAAAAATTTATTGGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCACGAGATCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAATACAAAAAAAATTAGCCAGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGCAGAAAGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGAGACAGAGCGAGACTCCGTATCAAAAAAAAAAAAAAAAGATTTTATTTATATTTATTTGTTTATTTATTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGCGGTGCAATATCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCTAGTAGAGATGGGGTTCCACTGTGTTGCCCAGCTGGTCTCGAACTCCTGACCTCAAGTGATCCTCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTAAGTCACTGCGCCCAGCTGTATTTTTATTTTTTGAGACAGGGTCTCACTCTGTCACCCAGGCCGGATTACAGTGGCACAACCATGGCTCACTGCAGCCTCGACCACCCCAGGCTCAAGCGATCCTCCCATCTCAGTCTCCCAAGTACCTGGGGCTACAGGGGTGTGCTACCACACCTGGCTAAATTTTGTATTTTTTGTAGAGACAGGGTTTCTCCAGGTTTCCTAGGCTGCTCTCAAACTTGGTGTCAAGTAATCCACCAGCCTCACCCCCACAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCTTGATCTCTACTTTTATCTTCCTGCTTCCAAGGAAATATTTTTTTCTTCTGAATTATCAGGCATTTACTCTTGTAATTCTTAGTCTCCCTACGCTTGTTTCCTCCCATAAGAAAATGGGGAAAATTATTCCTACATCACAGGGCTGTCTGAGGCCTAAATGAGATCGTGTATGTGAAAGTGATCTGCAAACCCCACACCATGCCAAGGTAAGGGAGGTAGTTTTTTATTTTCCTGCCAAAGGATAGCAGAAGCTGTACCTCTTGTCTGAGTTCTGTCTCTTGGCTTGACACCCTTCAGAGGAATTCCTGCCTCTTCCATGGGTCAGGAAGAGGTGCCTAGTTAGTTTCTTCTGGGTGCCGAGTTAATTCCTTCCCACCAAGTGGGTTTAAGCCCTGGAAGGAGTGTCTTGGGGCCAGGGTGCAGTGGGCGTTTGGTGCTGAGCATGGACCTGAAACTTCGTGTGTGGTCAGATTTATGTTCCATGCGTGGGGATGTGCACCGGACCAGGTATGTGTGTAGGTGGACATGGATGATGAGGTGTGTGTGCTGTGACTGTGTGTGCACCCTTGCCTGCGTATGACAAGCAGGCTGTGTGTGTAGGACCAGGAAGCTGTACTTGTGGCCAGGTATGTGGCTATGGACTGACGAGCTTGTTTGTTGAACACTTGCTCAGTGCCAGGCATCGCACTGGACTCTGAACACTCCGAGATGAGCGAGAGCGCCAGCGGGTGTCCCGCGCTGCAGCCAGCTTTGCATGTGCTCTTCTTGCTCCTTGGCGTTGGGCGTGGGGGTTCCGCGGATTTCCGGGGCTCTGGGGTGGTGTCCAAGCTGAAGGGGTAGTCAAAGCTGGACCATGCAATAAACCCACCAGGCAGATTCCCCAGGGCACCAGTGAGAGAAGAAAACCAGAAACAAATAGAACAAAAAGAAAGAAAGAAAAGTGGAAAAGCCTTTTTTGGGGGAAAACATTGATGTTTGATGTTTCTAAAAATGATAATGTAGTTATCATGGGAAAATTAGACTTGTTGGGCTTAAAACTTTTTCTTCTTTTACCTGAAGCAGAACATGCATAATGTTCATAAATATTAAGCACACAACCTGGCTCCATTTTTTTTTTTTTTTTTGAAATAGAGTCTTACTGTGTTGCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCGCTGCAACCTCCGCTTCCTGGGTTCAAGTGATTCTCCTGCTTCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7932:HG3_PB_pbsv_12626:HG4_Ill_SVrefine2DISCOVARDovetail_9191:HG2_PB_pbsv_12941:HG4_PB_SVrefine2PBcRDovetail_6543:HG4_PB_assemblyticsfalcon_5129:HG3_Ill_SVrefine2DISCOVARDovetail_9426:HG2_PB_SVrefine2PBcRplusDovetail_2213:HG2_PB_SVrefine2PB10Xhap12_9335:HG2_Ill_SVrefine2DISCOVARplusDovetail_2556:HG2_10X_SVrefine210Xhap12_9051:HG2_PB_SVrefine2Falcon2Bionano_6368:HG2_PB_SVrefine2Falcon1plusDovetail_2320;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2556:HG2_PB_SVrefine2PB10Xhap12_9335:HG2_PB_SVrefine2PBcRplusDovetail_2213:HG3_Ill_SVrefine2DISCOVARDovetail_9426:HG4_PB_SVrefine2PBcRDovetail_6543;NumExactMatchSVs=5;ClusterMaxShiftDist=0.199868;ClusterMaxSizeDiff=0.199868;ClusterMaxEditDist=0.28105;PBcalls=9;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=2307;DistBack=21674;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=180;REFWIDENED=12:7059063-7059242;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.9991;PctRecOverlap=0.9584;SizeDiff=-2;StartDistance=-95;EndDistance=-95;GTMatch=1;TruScore=98;MatchId=1102.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:76:1/1:1:18:0:40:./.:0:4:1:2:1/1:0:21:1/1:9:271:.:2399:.
chr12	7094601	HG2_PB_SVrefine2PBcRplusDovetail_2214	A	AGTGGCTCACGCCTGTAAACCAAGGCACTTTGGGAGGCTGAGGTGGGTGGATCACTTGAGATCCGGAGTTTGAGACCATACTGGCCAACATGGTGAAACCCCATCTCTACCAAAAATATAAAAAATTAGCTGGGTGTGGTGGCGGGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGTTTGCAGTGAGCTGAGATCGTGCCATTGCACTCCAGCTTGGGCAACAGAGCGAGACTCTGTCTCAAAACAAACAAACAAACAAATGCCATTTGATCTTCCTGGTGCCAGGATCAACTGGTGTTTTTTTTTTTTTTTGAGATGGAGTTTAGCTGTTTTTACCCAGGCTGGAGAGTGCAATGGCACGATCTTGGCAGCTCACTGCAACCTCCGGCCCCTAGGTTCAAGCGATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCCCGCCACCATGCCCAGTGAATTTTTGTATTTTTAGTAGAGACGGTATTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACCACGCCCGGCCAACTGGTGTTTTTTTTTTAATTGCTGTTCCCATAATAGGCTAGGCTCTTAAATTTATAGCTTCATGCAAGTATAGTTGACCCTTGATCAACACAATTTTGAACAGCAAGGGTCCCCTTAGACTTCCCTCTGCCTCTGCCACTGCTGAGATGGCAACCCTTTCTCTTTCTCCTCCTCCTTGCCTGCTCAACCTGAAGATCATGAGGAGGAAGACCTTTATGCTGATCCACTTCCACTGAATGAAGAGTAAACATATTTTTTCTTGCTTATGATTCTCTTAATAACATTTTCTTTTCTATAGTTTACTTTATGGTAAGAAATACATATATAACACAAATGACATACAAAATATATGTTAATCAACTTGTTTATGCTATTGGTAAGTCTTCTATTAGTAGTTAAGTTTTTGGAGAGTCAAAAGTTATATGTGGCCGGGTGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2321:HG3_PB_pbsv_12627:HG4_PB_pbsv_12926:HG2_PB_pbsv_12942:HG2_PB_PB10Xdip_7647:HG3_Ill_MetaSV_1041:HG4_Ill_MetaSV_994:HG4_Ill_GATKHCSBGrefine_8887:HG2_Ill_GATKHCSBGrefine_8624:HG2_Ill_MetaSV_946:HG3_Ill_GATKHCSBGrefine_8528:HG2_Ill_Spiral_881:HG4_Ill_Spiral_1018:HG3_Ill_Spiral_13426:HG4_PB_SVrefine2PBcRDovetail_6544:HG2_10X_SVrefine210Xhap12_9052:HG4_PB_SVrefine2Falcon1Dovetail_7933:HG3_Ill_SVrefine2DISCOVARDovetail_9427:HG2_PB_SVrefine2PBcRplusDovetail_2214:HG2_PB_SVrefine2PB10Xhap12_9336:HG2_PB_SVrefine2Falcon2Bionano_6369:HG2_Ill_SVrefine2DISCOVARplusDovetail_2557;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2557:HG2_PB_SVrefine2Falcon2Bionano_6369:HG2_PB_SVrefine2PB10Xhap12_9336:HG2_PB_SVrefine2PBcRplusDovetail_2214:HG3_Ill_SVrefine2DISCOVARDovetail_9427:HG4_PB_SVrefine2Falcon1Dovetail_7933;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.062585;ClusterMaxEditDist=0.193462;PBcalls=10;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=1072;DistBack=4775;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=227;REFWIDENED=12:7094602-7094828;PctSeqSimilarity=0.9865;PctSizeSimilarity=0.9963;PctRecOverlap=0.822;SizeDiff=4;StartDistance=-189;EndDistance=-189;GTMatch=0;TruScore=93;MatchId=1103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:27:0:20:./.:0:1:0:0:1/1:0:11:0/1:23:163:.:1821:.
chr12	7108053	HG2_10X_SVrefine210Xhap12_9053	T	TCAGGCTGGAGTGCAGTAGTGCAGTCTTGGCTCACTGAAACCTCTGCCTCTCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTGTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCTGGTGATCCGCCCGCCTCAGACTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGCGCCTGGCCTACTTACATTCGTTAAACCTCAATTTCTTCATCTTTGAAATCGGGAAAATACCAGCCATCTTGCAGGGCATCTTAAAGGTGAAAATATTTGGCCGGGCGCGGTGGCTCATGCCCACCCAGCTCTTTGGGAGGCCGAGACAGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGACGCCCCGTCTCTACTAAAAATACAAAAAAAAAGCCGGGGCGTGGTGGCGGATGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGAGACAGAGTGAGACTCAGTCTCAAAAAAAAAAAAAAAAAAAGCGAAAATATTTGCAAAAGTAGCATACATGTACTTCCTTCAGGCCACTTAAAATACTTATGCATGTCTAAATATTTTATATAAGCATACCTACACCTAACTTCTTAAAAATTGAGTATTCTTTTTTTGAGACGGCTGTCGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6545:HG3_PB_pbsv_12628:HG2_PB_pbsv_12943:HG4_PB_pbsv_12927:HG2_PB_PB10Xdip_7649:HG2_PB_PB10Xdip_7648:HG2_Ill_MetaSV_947:HG4_Ill_GATKHCSBGrefine_8888:HG3_Ill_GATKHCSBGrefine_8529:HG2_Ill_GATKHCSBGrefine_8625:HG4_Ill_SVrefine2DISCOVARDovetail_9192:HG4_PB_SVrefine2Falcon1Dovetail_7934:HG3_Ill_SVrefine2DISCOVARDovetail_9428:HG2_Ill_SVrefine2DISCOVARplusDovetail_2558:HG2_10X_SVrefine210Xhap12_9053:HG2_PB_SVrefine2PBcRplusDovetail_2215:HG2_PB_SVrefine2PB10Xhap12_9337:HG2_PB_SVrefine2Falcon2Bionano_6370:HG2_PB_SVrefine2Falcon1plusDovetail_2322;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9053:HG2_Ill_SVrefine2DISCOVARplusDovetail_2558:HG3_Ill_SVrefine2DISCOVARDovetail_9428:HG4_PB_SVrefine2Falcon1Dovetail_7934;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0604192;ClusterMaxSizeDiff=0.0591862;ClusterMaxEditDist=0.1972;PBcalls=11;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=787;DistBack=12909;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=258;REFWIDENED=12:7108054-7108311;PctSeqSimilarity=0.9918;PctSizeSimilarity=0.9987;PctRecOverlap=0.9202;SizeDiff=-1;StartDistance=-62;EndDistance=-62;GTMatch=0;TruScore=97;MatchId=1104.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:44:1/1:2:35:1:7:./.:0:0:0:4:1/1:0:20:1/1:6:114:.:1821:.
chr12	7253724	HG2_PB_SVrefine2PBcRplusDovetail_2216	T	TCTTTCCCTCCCTCCCTCCTTCCTTTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCTTTCCTTCCTTCCCTCCCTCCCTCCCTCCTTCCTTCTTTCCTTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_7658:HG4_PB_assemblyticsfalcon_5132:HG4_PB_SVrefine2Falcon1Dovetail_7935:HG2_PB_SVrefine2Falcon1plusDovetail_2323:HG3_PB_HySA_19493:HG3_PB_pbsv_12629:HG4_Ill_scalpel_11891:HG4_Ill_SVrefine2DISCOVARDovetail_9193:HG3_Ill_scalpel_12389:HG3_Ill_SVrefine2DISCOVARDovetail_9429:HG3_Ill_GATKHC_20537:HG3_Ill_GATKHCSBGrefine_8530:HG2_PB_SVrefine2PBcRplusDovetail_2216:HG2_PB_SVrefine2PB10Xhap12_9338:HG2_PB_SVrefine2Falcon2Bionano_6371:HG2_Ill_scalpel_12173:HG2_Ill_manta_3576:HG2_Ill_SVrefine2DISCOVARplusDovetail_2559:HG2_Ill_GATKHC_20671:HG2_Ill_GATKHCSBGrefine_8626:HG2_Ill_150bpfermikitraw_16210:HG3_PB_HySA_19492:HG4_PB_SVrefine2PBcRDovetail_6546:HG2_PB_HySA_23503:HG2_PB_PB10Xdip_7659;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16210:HG2_Ill_GATKHCSBGrefine_8626:HG2_Ill_GATKHC_20671:HG2_Ill_SVrefine2DISCOVARplusDovetail_2559:HG2_Ill_manta_3576:HG2_Ill_scalpel_12173:HG2_PB_SVrefine2Falcon2Bionano_6371:HG2_PB_SVrefine2PB10Xhap12_9338:HG2_PB_SVrefine2PBcRplusDovetail_2216:HG3_Ill_GATKHCSBGrefine_8530:HG3_Ill_GATKHC_20537:HG3_Ill_SVrefine2DISCOVARDovetail_9429:HG3_Ill_scalpel_12389:HG4_Ill_SVrefine2DISCOVARDovetail_9193:HG4_Ill_scalpel_11891;NumExactMatchSVs=15;ClusterMaxShiftDist=0.253521;ClusterMaxSizeDiff=0.253521;ClusterMaxEditDist=0.287037;PBcalls=13;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=98;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=228;REFWIDENED=12:7253660-7253887;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1105.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:2:31:2:21:1/1:1:16:0:18:./.:1:16:./.:.:.:.:.:.
chr12	7603968	HG2_PB_SVrefine2Falcon2Bionano_6375	A	AGAACGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4355:HG3_PB_pbsv_12637:HG2_PB_pbsv_12950:HG4_PB_pbsv_12934:HG4_PB_assemblyticsfalcon_5144:HG2_PB_PB10Xdip_7679:HG2_PB_PB10Xdip_7678:HG4_PB_HySA_18805:HG2_PB_SVrefine2PBcRplusDovetail_2220:HG2_PB_SVrefine2Falcon2Bionano_6375:HG2_PB_SVrefine2PB10Xhap12_9343:HG2_Ill_MetaSV_948:HG4_PB_SVrefine2PBcRDovetail_6551:HG4_PB_SVrefine2Falcon1Dovetail_7943:HG4_Ill_GATKHCSBGrefine_8893:HG2_PB_SVrefine2Falcon1plusDovetail_2327:HG2_10X_SVrefine210Xhap12_9056:HG2_PB_HySA_23520:HG3_PB_HySA_19504;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6375:HG2_PB_SVrefine2PBcRplusDovetail_2220;NumExactMatchSVs=2;ClusterMaxShiftDist=0.227273;ClusterMaxSizeDiff=0.227273;ClusterMaxEditDist=0.257143;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=318;DistBack=14079;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:7603969-7603983;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9907;PctRecOverlap=0.9938;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=1106.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:1/1:3:36:0:23:./.:1:6:0:4:1/1:0:14:1/1:1:41:.:.:.
chr12	7743728	HG2_Ill_GATKHCSBGrefine_8630	T	TGGAAAGAGAGGGAGAGGGAGATCGTGGGGAGAGGGAGAGGGAGAGATGCCGACCGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2562:HG4_PB_assemblyticsfalcon_5145:HG2_PB_pbsv_12952:HG4_PB_HySA_18806:HG2_PB_HySA_23521:HG2_PB_PB10Xdip_7681:HG2_PB_PB10Xdip_7680:HG4_Ill_GATKHC_20682:HG4_Ill_GATKHCSBGrefine_8894:HG4_Ill_150bpfermikitraw_16411:HG3_Ill_Spiral_13434:HG3_Ill_GATKHC_20550:HG3_Ill_GATKHCSBGrefine_8532:HG3_Ill_250bpfermikitraw_16741:HG3_Ill_150bpfermikitraw_16251:HG2_Ill_GATKHC_20684:HG2_Ill_GATKHCSBGrefine_8630:HG2_Ill_150bpfermikitraw_16223:HG4_PB_SVrefine2PBcRDovetail_6552:HG4_Ill_SVrefine2DISCOVARDovetail_9197:HG3_Ill_SVrefine2DISCOVARDovetail_9435:HG2_PB_SVrefine2PBcRplusDovetail_2221:HG2_PB_SVrefine2PB10Xhap12_9344:HG2_PB_SVrefine2Falcon2Bionano_6376:HG2_PB_SVrefine2Falcon1plusDovetail_2328;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16223:HG2_Ill_GATKHCSBGrefine_8630:HG2_Ill_GATKHC_20684:HG3_Ill_150bpfermikitraw_16251:HG3_Ill_250bpfermikitraw_16741:HG3_Ill_GATKHCSBGrefine_8532:HG3_Ill_GATKHC_20550:HG3_Ill_Spiral_13434:HG4_Ill_150bpfermikitraw_16411:HG4_Ill_GATKHCSBGrefine_8894:HG4_Ill_GATKHC_20682;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0884956;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.141593;PBcalls=11;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=-101;DistForward=52;DistMin=-101;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=107;REFWIDENED=12:7743723-7743829;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:43:1/1:1:13:3:21:./.:3:14:1:11:./.:3:19:./.:.:.:.:.:.
chr12	7841391	HG2_Ill_SVrefine2DISCOVARplusDovetail_2564	A	AAAAAAATTAGCCAGGTATGGTGGCCTATGCCTATAATGCCAGCTACTCGGGAGGCTGAGGCAGGATAATCGACTGAACCCAGGGGGCGGAGGCTGCAGAGAGCTGAGATTGTGCCACTACACACCAGCCTGGGTGACAGAGTGAAACCCTGTCTCAAAATATTTCTTTTCTATTTTTTTTTTTTTTCGAGACAGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCACAATCTCGGCTCACTGCAACCTCTGCCTCCCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGATTACAGGCACCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCCGACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCCAGCCCTCAAAATTAAATAAATAAAATAAAATAAAATTATATGTACAATGAGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGAACTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7947:HG4_PB_pbsv_12939:HG2_PB_pbsv_12956:HG2_PB_PB10Xdip_7688:HG2_PB_PB10Xdip_7687:HG4_PB_HySA_18810:HG3_PB_pbsv_12643:HG2_PB_HySA_23529:HG2_Ill_MetaSV_950:HG4_Ill_MetaSV_997:HG4_Ill_GATKHCSBGrefine_8895:HG3_Ill_GATKHCSBGrefine_8534:HG2_Ill_GATKHCSBGrefine_8632:HG3_Ill_MetaSV_1044:HG2_PB_HySA_23528:HG4_Ill_SVrefine2DISCOVARDovetail_9199:HG2_PB_SVrefine2Falcon2Bionano_6379:HG2_Ill_SVrefine2DISCOVARplusDovetail_2564:HG2_PB_SVrefine2PB10Xhap12_9348:HG3_Ill_SVrefine2DISCOVARDovetail_9437:HG2_10X_SVrefine210Xhap12_9060:HG2_PB_SVrefine2PBcRplusDovetail_2225:HG2_PB_SVrefine2Falcon1plusDovetail_2331:HG4_PB_SVrefine2PBcRDovetail_6555;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2564:HG2_PB_SVrefine2Falcon2Bionano_6379:HG4_Ill_SVrefine2DISCOVARDovetail_9199;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0561883;ClusterMaxSizeDiff=0.0501139;ClusterMaxEditDist=0.188822;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=644;DistBack=-159;DistForward=-1;DistMin=-159;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=12:7851222-7841550;PctSeqSimilarity=0.9927;PctSizeSimilarity=1;PctRecOverlap=0.9333;SizeDiff=0;StartDistance=-43;EndDistance=-43;GTMatch=0;TruScore=97;MatchId=1109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:0:28:1:24:./.:0:9:0:4:1/1:0:21:1/1:5:112:.:.:.
chr12	9369225	HG2_PB_SVrefine2PBcRplusDovetail_2232	T	TAAAGAAAAAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAAACACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGTCTGTAGTCCCAGCTACGCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4356:HG4_PB_pbsv_12953:HG3_PB_assemblyticsfalcon_5272:HG3_PB_pbsv_12656:HG4_PB_HySA_18823:HG3_PB_HySA_19524:HG3_PB_SVrefine2Falcon1Dovetail_7876:HG2_PB_pbsv_12969:HG2_PB_HySA_23544:HG4_PB_assemblyticsfalcon_5162:HG2_PB_assemblyticsPBcR_5098:HG2_PB_PB10Xdip_7884:HG2_PB_PB10Xdip_7883:HG4_PB_SVrefine2Falcon1Dovetail_7952:HG2_Ill_SVrefine2DISCOVARplusDovetail_2571:HG4_Ill_MetaSV_1004:HG4_Ill_GATKHCSBGrefine_8906:HG3_Ill_MetaSV_1052:HG3_Ill_GATKHCSBGrefine_8544:HG2_PB_SVrefine2PBcRplusDovetail_2232:HG2_PB_SVrefine2PB10Xhap12_9357:HG2_Ill_MetaSV_957:HG2_Ill_GATKHCSBGrefine_8643:HG2_PB_SVrefine2Falcon2Bionano_6385:HG2_10X_SVrefine210Xhap12_9071:HG2_PB_SVrefine2Falcon1plusDovetail_2342;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8643:HG2_Ill_MetaSV_957:HG2_PB_SVrefine2PB10Xhap12_9357:HG2_PB_SVrefine2PBcRplusDovetail_2232:HG3_Ill_GATKHCSBGrefine_8544:HG3_Ill_MetaSV_1052:HG4_Ill_GATKHCSBGrefine_8906:HG4_Ill_MetaSV_1004;NumExactMatchSVs=8;ClusterMaxShiftDist=0.224422;ClusterMaxSizeDiff=0.224422;ClusterMaxEditDist=0.285235;PBcalls=17;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=313;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=12:9369226-9369239;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1110.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:64:1/1:1:9:0:8:./.:0:3:0:5:1/1:0:32:1/1:2:64:.:.:.
chr12	9480771	HG3_Ill_svaba_16239	C	CTCCCCTCCCCTTCCCTTCCCCTCCCCTCCCTTTCCCCTCCCTTCCCCTTCCCTTCCCTTCCCTCCCCTCCCTTTCCCCTCCCT	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_5165:HG2_Ill_breakscan11_4357:HG2_PB_PB10Xdip_8095:HG2_PB_PB10Xdip_8094:HG4_Ill_svaba_16150:HG3_Ill_svaba_16239:HG3_Ill_GATKHC_20581:HG2_PB_assemblyticsPBcR_5100:HG2_Ill_svaba_16094:HG2_Ill_GATKHC_20708:HG2_Ill_GATKHCSBGrefine_8645:HG2_Ill_250bpfermikitraw_17248:HG2_PB_pbsv_12971:HG4_PB_pbsv_12957;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17248:HG2_Ill_GATKHCSBGrefine_8645:HG2_Ill_GATKHC_20708:HG2_Ill_svaba_16094:HG2_PB_assemblyticsPBcR_5100:HG3_Ill_GATKHC_20581:HG3_Ill_svaba_16239:HG4_Ill_svaba_16150;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0853659;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.2125;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=83;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=12:9480764-9480821;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:./.:1:9:0:1:./.:0:0:0:1:1/1:1:22:./.:.:.:.:.:.
chr12	10155045	HG2_10X_SVrefine210Xhap12_9074	TTT	GTGACCAGAAATATGCTGTAAGTACTTAGCTTTTGTTTATATCCATTAGCCTATGATCAAATTGGCTTTGCTCTACCTTGCTTCACCTAAGTCACAGTTTCTAAGAATCTATTAATTGATGACGTTAAGTGAGGACTTCCTGTGTTACCCGATACATATTTGTTGAATGAGTGAAGCATATATGTATGACAGACATTATAATCCCGATTTTGCATATGGGAAGAGAAGTTTAACTAATTTGAGCAAG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_960:HG4_Ill_GATKHCSBGrefine_8913:HG2_Ill_GATKHCSBGrefine_8651:HG4_PB_HySA_18855:HG4_PB_SVrefine2Falcon1Dovetail_7956:HG3_PB_SVrefine2Falcon1Dovetail_7878:HG4_Ill_SVrefine2DISCOVARDovetail_9210:HG2_Ill_SVrefine2DISCOVARplusDovetail_2574:HG2_10X_SVrefine210Xhap12_9074:HG4_PB_pbsv_12970:HG4_Ill_Spiral_1020:HG2_PB_pbsv_12983:HG4_Ill_MetaSV_1008;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9074:HG2_Ill_SVrefine2DISCOVARplusDovetail_2574:HG4_Ill_SVrefine2DISCOVARDovetail_9210;NumExactMatchSVs=3;ClusterMaxShiftDist=0.175589;ClusterMaxSizeDiff=0.167024;ClusterMaxEditDist=0.235546;PBcalls=5;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=244;DistBack=0;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:10155048-10155044;PctSeqSimilarity=0.996;PctSizeSimilarity=0.9959;PctRecOverlap=0.9919;SizeDiff=-1;StartDistance=-1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=1112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:37:0|1:45:3:0:34:0|1:21:0:0:14:0/1:25:15:./.:.:.:.:.:.
chr12	10234187	HG3_Ill_GATKHCSBGrefine_8551	G	GCAAATTAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_HySA_18856:HG4_PB_pbsv_12971:HG3_PB_pbsv_12670:HG3_PB_HySA_19535:HG3_PB_SVrefine2PBcRDovetail_6106:HG4_Ill_MetaSV_1009:HG3_Ill_MetaSV_1056:HG3_Ill_GATKHCSBGrefine_8551:HG2_PB_SVrefine2PB10Xhap12_9361:HG2_PB_SVrefine2Falcon2Bionano_6386:HG2_Ill_MetaSV_961:HG2_10X_SVrefine210Xhap12_9075:HG2_Ill_breakscan11_4359:HG2_PB_PB10Xdip_8135:HG2_PB_PB10Xdip_8134:HG2_PB_HySA_23565;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_961:HG2_PB_SVrefine2Falcon2Bionano_6386:HG2_PB_SVrefine2PB10Xhap12_9361:HG3_Ill_GATKHCSBGrefine_8551:HG3_Ill_MetaSV_1056:HG4_Ill_MetaSV_1009;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0758725;ClusterMaxSizeDiff=0.0695915;ClusterMaxEditDist=0.199413;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=320;DistBack=52300;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:10234188-10234202;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:71:1/1:1:30:0:28:./.:1:1:0:9:1/1:0:34:1/1:2:80:.:.:.
chr12	10732292	HG2_PB_PB10Xdip_8141	T	GGCCACAGGCCAGCATCCCAACAGCATTTCACACTATTGTATAGGTTTTTTTTGTTTTATTTTATTTTTTATTGACACATAATAATTGTACATATTTATGGGGTACAGTGTGATGTTTCAATACATGTATACATTGTGTAATCATCAAGTCAGGAATCAGGGTAATTAGCTTATCCATATCCCCAAACACTTACCATTGCTTTGTGGTGAGGACATTCAAAATTCTCTCTTCTAGTTATTTTAAAATAGACTCTACAATATCATTAACGATAGTCATCCTACTTTGCAATAGAACACCAGAACTTATTCCTTCTATCTGTAATTTTGTACCTGTTGACCAATCTCTCTCCATTCCTTCCTCCCTCTGCCCTCCCCAGACTCTGGTAACCACTATTCTACTCTGTACTCCCATGATACCAACCTTTTAAAATTCCACAAAAGAGTGAAACCATGTAGTATTTGTTTCTGTGCCTGGTTCATTTCACTTAACATAATATTCTCCAGGTTCATCAAATTAATGCAAATGACAGGATTTTATTTTTTTTATGACTGAATGCTTTTCATTGTCTATATATACTAATTTTTTTTTTTTTAAGGCAGAGTTTCACTCTGTCACACAGGCTACAGTGCAGTGATGCGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGTGCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTTGCTATGTTGGTAAGGTTGCTCTTGAACTCCTGACCTCAAATGATCCGCCTACCTGGGCATCCCAAAGTGCTGGGATTCCAGGCATGAGCCACTGCGCCTGGCCTATATGCCACATTTTTTAATCCATTAATTCACTGATGAGCACTTAGGTTGATCCCATATTTTGGCTATTGTGAATAGTGCTGCCGATATCTCTTCGACATACTGATTTCATTTCCTTTGGATAAATATCCAGTAGTGGGATTGTTGGATCATTTTTAATTTTTTGAGGCACCTCCATATTGTTTTCCATAGTGACTGAACTAATTTACATCTCCACCAACAGTGTTTAAGAGTTCCCACTTTTCTACATCCATGCCAAGGCAGCATTTTTTCTCTTTTTCATAATAATCATTCTAATAGGCATGAAGTGATAACTCATTGTAGTTTTGATTTGCATTTCCCTCATGATTAGTAATGTTGAGCATTTATGCATATACCTATTCCCATTTGTTTGTCGTCTTTTGAGAGATGCCTATTCAGATCTTTTGTCCATTTTTTAATTGAGTTGTTTGAGTTTCTTATATATTTTGGATACTAACCCCTTCTCAGATGCATAGTTTGTAAGTATTTTCTCCCATTCTGCATGTTGTCTCTTCACTCTTGATTATTTGATTTGCTGTGCAGAAGCTTTTCTGATGTATTCCCACTCGTCTACTCTTGCTTTTGTTGCCTGTGCTCTCAAAGTCTTAACCAAAAAATCATTGCCCAGACCAATATTATGATACATTTCCACTGTGTTTTCTTCTAGTAGTTTTGGTCTTACCTTTTAGACTTTAATCCATTTTGAGTTGATTTAAGTATATGGTGAAAGGTGAGGATCTAGTTTCATTGTGCATGTGGATATAAAATTTTCCCAGCACCATTTATTGAGGAGACAGTCCCTTCTCCAATGTGTGTTCTCAGTGCCTTTGTTGAAGATCAGTTGGCTGTAAGTCTGTGGATTTATTTCTGTGTTCTTCATTCTGTTCCATTGGTCTGTGTGTCTATTTTTATGCTACCATGCTGTTTTGGTTACTATAACTTTGTGGTATACTTTGAAGTTAGGTAATGTCTTTTTGCTCAAGATTTCTACTATGGGCAGGAGGCCAGTGGGCACATAGATGGAGGCTCAGCATCACTGAACATTAGGGAGATGGGAATCAGAGTCACCACAGATAACTATCCAATCACAAGGTAAACAAGAGACAAAGAAAGGACCAAATAATCTATAAAACAACCAGAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8141:HG2_PB_pbsv_12986:HG3_PB_pbsv_12673:HG4_PB_HySA_18863:HG2_Ill_SVrefine2DISCOVARplusDovetail_2579:HG2_PB_SVrefine2PBcRplusDovetail_2234:HG2_PB_SVrefine2PB10Xhap12_9365:HG3_PB_SVrefine2PBcRDovetail_6109:HG2_PB_SVrefine2Falcon2Bionano_6389:HG4_Ill_SVrefine2DISCOVARDovetail_9214:HG2_PB_SVrefine2Falcon1plusDovetail_2345:HG2_Ill_breakscan11_4360:HG2_PB_PB10Xdip_8142;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_8141:HG2_PB_PB10Xdip_8142;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0493413;ClusterMaxSizeDiff=0.0483832;ClusterMaxEditDist=0.194093;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=2036;DistBack=-3;DistForward=0;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:10732293-10732291;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.998;PctRecOverlap=0.998;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1114.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:122:1/1:0:38:0:41:1/1:0:18:0:17:1/1:0:48:1/1:11:275:.:2052:.
chr12	10973724	HG4_Ill_GATKHC_20734	A	ATATCTTATACATATATATATCTTATACATATATATATCTTATACATATATATATC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2582:HG4_Ill_svaba_16174:HG2_PB_pbsv_12989:HG4_Ill_manta_3048:HG4_Ill_Krunchall_17928:HG4_Ill_GATKHC_20734:HG4_Ill_GATKHCSBGrefine_8918:HG4_Ill_250bpfermikitraw_17121:HG4_Ill_150bpfermikitraw_16458:HG3_Ill_svaba_16257:HG3_Ill_scalpel_12426:HG3_Ill_manta_2933:HG3_Ill_Krunchall_17270:HG3_Ill_GATKHC_20601:HG3_Ill_GATKHCSBGrefine_8556:HG3_Ill_250bpfermikitraw_16783:HG3_Ill_150bpfermikitraw_16291:HG2_Ill_svaba_16113:HG2_Ill_manta_3588:HG2_Ill_Krunchall_17606:HG2_Ill_GATKHC_20731:HG2_Ill_GATKHCSBGrefine_8656:HG2_Ill_250bpfermikitraw_17271:HG2_Ill_150bpfermikitraw_16265:HG4_Ill_SVrefine2DISCOVARDovetail_9216:HG3_PB_pbsv_12676:HG2_PB_SVrefine2Falcon2Bionano_6392;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16265:HG2_Ill_250bpfermikitraw_17271:HG2_Ill_GATKHCSBGrefine_8656:HG2_Ill_GATKHC_20731:HG2_Ill_Krunchall_17606:HG2_Ill_manta_3588:HG2_Ill_svaba_16113:HG3_Ill_150bpfermikitraw_16291:HG3_Ill_250bpfermikitraw_16783:HG3_Ill_GATKHCSBGrefine_8556:HG3_Ill_GATKHC_20601:HG3_Ill_Krunchall_17270:HG3_Ill_manta_2933:HG3_Ill_scalpel_12426:HG3_Ill_svaba_16257:HG4_Ill_150bpfermikitraw_16458:HG4_Ill_250bpfermikitraw_17121:HG4_Ill_GATKHCSBGrefine_8918:HG4_Ill_GATKHC_20734:HG4_Ill_Krunchall_17928:HG4_Ill_manta_3048:HG4_Ill_svaba_16174;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.357143;PBcalls=3;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=10;DistForward=39646;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=96;REFWIDENED=12:10973663-10973758;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:47:0|1:35:5:5:48:./.:3:35:20:0:0/1:23:35:./.:.:.:.:.:.
chr12	12806237	HG4_PB_HySA_18871	A	AGTGTCAGGCATGGTGGCTCACGCCTGTTATCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCATGAGGTCAGGAGATCGAGACCATTCCTGGCTAACACAGTGAAACCCCGTCTTTACTAAAAATAAAAAAAATTAGCTGGGCGTGGTAGGCACGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGATTGCAATTGAGCCGAGATCGCACCATTGCACTCCAGCCTGGGCAACAAGAGCAAAAACTCTGTCTCCAAAAAAAAAAAAAAAACCAACCAACCATCAAACAAACAAAACCAAAACCAAAACACCTATAAAAAATCCTAAGAGGAAGCATGGAAAATAAAAGAAAAAAATCAGAGTCGGGGGCTTTTTAGCAAAAACCCACAAGACTGATAAATGGACTACAGAAAAGTGTCTGTTTGAAAAAAAATGCCATAAACAAAAGCTTTAAAAGACAAATGATTAAAATAGAAAATATCTTTGATATGTTTGGATTTGTGTCCTGCCCAAATCTCATGTTGAATTGCAACCTCCAACCTCCAGTGTTTGGTGATATGGAAGTGGAGGCAGGGAAGTTGCTGGGTAGAGAAAGGCAGGTCCCTGGTGAGGGCTCCACCCCAGGCCTGTTGCCCACGGACCTAGGTGGAGAACAGGGACTCCTTGCCTTCGTGCCCAAATGTTGCATTTCCCAGGACCACCCTGGCCCACCACACCCCCCATCCTGTGCCTATTAAAAACCCCCAAGACCCTAGCAGGCAGGCACTCCAGCAGTTGGATGTCCAGAGAAACACATTTGGCAGAGGAACACACACAAATGGCTGGATGTTGAGAGGATATCCAAGAACACATTGACAGGCACGCTGGCATGCCAGCAGGCCACCGACCGGCAGAACGACGTTGGGAGTTTGGCCGGGGTGGTTGGAGGAGAGCCCGGGGCCACTGAGCGGCCCGACTCCAGGAGAAAACCATCTCCCTTCTGGCTCCACCATCTGCTGAGAGCTACTTCCACTCAATAAAACCTTGCACTCACGGTCCAAGCCCACATGCGATTCCAAGTCTTCCAGTACACCAAGGCAAGAATCCCCGGGATACAGAAAGCCCTCTGTCCTTGTGTTGTGAGGCAGGGGTCTAATTGAGCTGACTAACACAAGCCACCTATGGATAGCTAAACTAAAAGAGCACCCTGTAACACACACCCACTGGGGCTTCAGCTGTAAACATTCACTCCTAGACACTGCCATGGGGTTGGAGCCCCATAGCCCGCCTGTCTGTATGCTCCCTTAGAGGTTTGAGCAGCGGGGCACTGAAGAAGTGAGGCACACCCCCATTGCATGGCCTACGAGGGGGACAAGGGAATTTCTCTCGTTTCATTGGGAGGTGATTGGATCATGGGGGCAGATTTCCCCCCTTGCTGTTCTTGTGATAATGAGTGAGTTCTCATGAGAGCTGGTTGTTTAAAAGTGTGTGGCATCTCCCACCTTCTCTTCCTCCTTCTTGGCCTTGTAAGATGTGCCTGCTTCCCCTTTACCTTCTGCCATGATTGTAAGGTTTCCTGAGGCCTGCCCAGCCATGCTTCCTGTACAGCCTGTGGAACGGTGAGTCAATTAAGCCGCTTTTTCTTTACCCAGTCTCAGGTAGTTCTTTATAGCAATGCTTGAATGGACTTATATAGAAAAATTGGTACCAAGAAGTGGGGGCATTGCCATACAGATACCTGAAAATGTGGAAGTGACTTTGGAACTGCGTACCAGGCAGAGGTTGGAACAGTTTGAGGCTCAGAAGAAGACAGGCAGATGAGGAAAGTTTGGAACTTCCTAGAGACTTGTTAAATTGTTGTGACCAAAATGCTGATAGTGATATGAACAATGAAGTCCAGGGTGAGGTGGTCTCAGATGGAGATGAAAAACTTATTGGGAACTGGAGTAAAAGGTCACTTTAGTTATGCATTAGCAAAGAGGATTGTGCCCCCTGCCCTAGAGATCTGTGAAACTTTGAACTTGAGAGTGATGATTTTGGGTATCTGGCAGAAGAAATTCTAAGCAGCAAAATGTTCAAGACTTGGCTTGTCTGCTTCTCTAGGCAGCCTATGCTTATATTCATGAGCAAAGAGATTGATCTGAAAGTGGAACTTATATTTAAAAAGGAAGCACAGCATAAAAGTTTGGAAAATTTGCAGCCTGACCATGTGTGTAGAGAAGAAAAAACCCATTTTCTGGGGAGGAATTCAAGCTGGCTTCAGAAATTTGCGTAAGTAAAAGAGGAGCCCAATGTTTTATAGCCAAGACAATGGGGAAAATGCTTCAAAGACATTTCTGGAGACCTGCTTGCACCATGCCTGGATAAGCACAGGCACTCAACCCCAGCTCATAAAGCAGCCAAGCAGCCGAGGGGGCTGTTACCCTCCAGAGCCATAGGGACAGAGATGCCCAAGGCCTTGGGAGCCCCACCCCTTGTACAAGTGTGCCCTGGATATGAGACATGGAGTCAGAGGAGATTATTTTGGAGATTTAAGGATTTAATGACTTCCCTGCTGGGTTTCAGACTTGCATGGGGCTTGTAGCCCCTTTGTTTGGCTGATTTCTCCCTTTTGGAAAGGGTGTATTTACCCCAATGCCTGTACCCCCATTGTATCTTAGAAGTAACTCACTGTTTTTATTTCACAGACTTATAGGTAGAAGGGACTTGCCTCGTCTCAGGTGAGACTTTGGGCTGCAGACTTCTGAGTTAATGCTGATATGAGTTAAGAACTTGGGGGACTATTGAGAAGGGATGATTGTAGTTTGCAATTTGAGAAGGACATGAGATTTGGGAGGGGCCAGAGGTGGAATGATATGGTTTGAGATTTGTGTCCCCGCCTAAATCTCATGTTGAGTTGTAACCCTACTGTTGGAGGAGGGGCCTGGTGGGAGGTGATTGGATCATGGGGGCAGATCTCCCCCTTGCTGTTCTCATAATAAGGTGAGTGAGTTCTCACAAGATCTGGTTGTTTAAAAATGTGTGGCACCTCCCCTGCCCTGTTCCTCCTTCTCCAGCCACGTAAGACGTGCCTGCTTCCCTCTTGCCTTCCTCCATGATTGTAAGTTTCCTGAAGCCTCCCCAGCCATGCTTCCTGTACAGCCATGCAGAACTGTGAGTCAATTCAACCTCTTTTCTTTATAAATTATCCAGTCACAGGTAGTACTTTATAGCAATGTGAGAACAGACTAATACAATCTACTTCAAAATGACAGAGTATTTTCCTGAAATAATTAGACCATCATGTTTTCGAGGTGAAAATGATTGGTTTAGTGACTGGGTTGGGCCTGACCCAAGTCCAGCCAATCAGAATCAAAAGAGACTCAATTCTGCAGCTTTTATGATATCTTGTGAGAAGTGAATTAGCTCTTTCCTGCTGAACTTGGCATATGAAAAGCTGTAGGGGATAGAGCTGCTACTCTAATTTGCTCCCAGTAAAGCCAAGCTACTTCAAGGCAGAGGGCAGAGAGAGTACCAACTCTCTCACTGATACAGGAACCAGAAAGAAATTATTTAGGCAGATAGGGTAAAACGAGTCTTTGGCAGAATTTCCCTTTTAACAAAAAAGCAGCCCCCAAATTATTTTTTTCTAACTAAGGACAGCTTGAAAAATTGAGCTGCAAAAATAGATAAGCAACTGGAAGTTTACATGGGTGAATGCCAGCATCTGTGCCAATAGAAGAGGGCTACTACCTGGGAACCAGGTATGTTCGGCATGGAGGCTCCATCTTCCCTTTTTCTTTGTTACCATGTGTACAGTAAAGAAACAGGCAACATGGCACCGGCCAGGTAAATAACCCATCTGCGTAATAAAAGATTAGGGTGGGTGCAGCCACCTTTTTGTGCCCTATGCATTATGGCACCCCTAGCTCTAACCAGTTTTTCACACCTTATGCAAATGGCACACCTGGTCCATGCAATCTTTTGTGCCCTATGTTAATCAGACCACCACCTCCTCAAGCTCACCTATAAAAACCTGCTGCATGTGCCTGTTCGGGACCCCTCTCTCTGCAGGAGAGAGCTCTTCTCTTTCTTTTGCCTGTTAAGCCTCAGCTCTTAACCTCACTCCTAGTGTGTCCATGTCCTTGATTTCCTTGGCATGAGAGACAACAAACCTAGGAAATCACCCCAGACAGTGAGGCCACTTCATCATGACATTGTTTGAGTCTCAAATACAGTTATGCCTGAAGTTCTACTCCCACAATTTTTAGTTAGGGGAGCAGTTCATTCTTTTGTCAATTTGGGTCTGTCACTTAAAATCAAAAGCGGACCTAACTGATATACAATTCACTATGAAAACAGGCAAAAGACATGAAAAAAAGAGTTGCTTTTAAATATAAAAAAGCTATTCAACCTCACTCATAAAGAAATGTACATTAAAACAATAAGG	20	PASS	ClusterIDs=HG4_PB_HySA_18871:HG2_PB_HySA_23584:HG3_PB_HySA_19549:HG2_Ill_breakscan11_4362:HG2_PB_PB10Xdip_6649:HG2_PB_PB10Xdip_6648:HG4_PB_pbsv_12997:HG2_PB_SVrefine2Falcon1plusDovetail_2358:HG2_Ill_SVrefine2DISCOVARplusDovetail_2595:HG2_PB_SVrefine2PB10Xhap12_9381:HG2_PB_SVrefine2PBcRplusDovetail_2248:HG3_PB_SVrefine2PBcRDovetail_6119:HG2_PB_SVrefine2Falcon2Bionano_6404:HG2_PB_HySA_23583;NumClusterSVs=14;ExactMatchIDs=HG4_PB_HySA_18871;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0701405;ClusterMaxSizeDiff=0.0701405;ClusterMaxEditDist=0.142715;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=4441;DistBack=57057;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=266;REFWIDENED=12:12806238-12806503;PctSeqSimilarity=0.9902;PctSizeSimilarity=0.9872;PctRecOverlap=0.9874;SizeDiff=57;StartDistance=-26;EndDistance=-26;GTMatch=0;TruScore=98;MatchId=1116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:91:1/1:0:51:0:24:./.:0:6:1:12:1/1:1:28:1/1:13:684:.:4417:.
chr12	12933683	HG2_PB_PB10Xdip_6650	CA	TTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTATTCCATTTGCAGGTTATTTTACTTGCATGGCTCACCATGTGTCATCTATATATTCCAGCTATTGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTACATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGT	10	PASS	ClusterIDs=HG2_PB_HySA_23586:HG3_PB_HySA_19552:HG4_PB_pbsv_12998:HG2_PB_pbsv_13006:HG3_PB_pbsv_12692:HG2_PB_SVrefine2Falcon1plusDovetail_2359:HG2_PB_SVrefine2PB10Xhap12_9382:HG2_PB_PB10Xdip_6650:HG3_PB_SVrefine2PBcRDovetail_6120;NumClusterSVs=9;ExactMatchIDs=HG2_PB_PB10Xdip_6650:HG2_PB_SVrefine2PB10Xhap12_9382;NumExactMatchSVs=2;ClusterMaxShiftDist=0.166092;ClusterMaxSizeDiff=0.166092;ClusterMaxEditDist=0.211744;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1594;DistBack=2838;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:12933685-12933682;PctSeqSimilarity=0.9434;PctSizeSimilarity=0.8925;PctRecOverlap=0.8931;SizeDiff=-192;StartDistance=4;EndDistance=5;GTMatch=0;TruScore=90;MatchId=1117.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:36:./.:4:16:32:17:./.:22:3:35:0:0/0:53:1:0/1:63:170:.:1743:.
chr12	13164369	HG2_10X_SVrefine210Xhap12_9096	G	GACCTTGGGCGACTTATTTACTCTCTCTTTGCCTCAGGGCTGTCATCTGAAAAATGGAAATAATGATAATGTGTACCTCAGAGGCTTGTTATGAGGATTAATAATTGCAAAGCACTTAGAACAGGGCCTGGCACATAGTAAGTGCTCTGTAAGTGAATCTTAACCTAAAAAAGGAGAAGAATGATGAAAAATCCAAATTGAAGCAACTATTTCAATATCATAAAATTACTAATCTATATTCTTTTAAAATGTCAATGTCTTAAAAGACAAGAAAAGGCTAAAGAATTGATTCAAATTAAACGAGACTAGAGAGACACTACAAGTAAATGTCATCTGTGATTATGGGCTGGACCCTGTGCCAAGAAAAAATACTCTAAAGAACATTAGTAGAATTAAATTGATTAAGTTAGCATACAGACTGTAGATTAGATAAAAGTATTATATCAATATTAAAGTTCCTGACATTGATAACTATATTGTGGTTATCACAATATAGTTGGGCGAC	20	PASS	ClusterIDs=HG2_PB_HySA_23592:HG4_PB_pbsv_13000:HG4_PB_HySA_18874:HG2_PB_pbsv_13010:HG2_PB_PB10Xdip_6777:HG3_PB_SVrefine2Falcon1Dovetail_7882:HG2_PB_SVrefine2PB10Xhap12_9384:HG2_PB_SVrefine2Falcon2Bionano_6405:HG2_10X_SVrefine210Xhap12_9096;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9096:HG2_PB_SVrefine2Falcon2Bionano_6405;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0880626;ClusterMaxSizeDiff=0.0861057;ClusterMaxEditDist=0.201923;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=504;DistBack=41;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=483;REFWIDENED=12:13164370-13164852;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:58:./.:22:11:5:15:./.:0:0:0:57:1/1:1:23:0/1:6:12:.:.:.
chr12	13504684	HG2_PB_SVrefine2Falcon2Bionano_6407	A	ATATGTGTATATATATATATACACATATATATATACATATATATATGTATATATATATATACATATGTATATATATATATGTATATACATATGTATATATATATATG	20	PASS	ClusterIDs=HG4_PB_pbsv_13003:HG4_Ill_manta_3056:HG4_PB_HySA_18876:HG4_Ill_GATKHCSBGrefine_8937:HG4_PB_assemblyticsfalcon_5216:HG2_Ill_GATKHC_20762:HG2_Ill_GATKHCSBGrefine_8679:HG4_Ill_SVrefine2DISCOVARDovetail_9234:HG2_PB_SVrefine2Falcon2Bionano_6407:HG2_Ill_SVrefine2DISCOVARplusDovetail_2598:HG2_10X_SVrefine210Xhap12_9099:HG2_10X_SVrefine210Xhap12_9098:HG2_PB_HySA_23599:HG2_PB_HySA_23598:HG2_PB_pbsv_13012:HG2_Ill_manta_3597:HG4_Ill_250bpfermikitraw_17142:HG4_Ill_150bpfermikitraw_16478:HG2_PB_HySA_23597;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9099:HG2_Ill_SVrefine2DISCOVARplusDovetail_2598:HG2_PB_SVrefine2Falcon2Bionano_6407:HG4_Ill_SVrefine2DISCOVARDovetail_9234;NumExactMatchSVs=4;ClusterMaxShiftDist=0.239234;ClusterMaxSizeDiff=0.239234;ClusterMaxEditDist=0.352381;PBcalls=8;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=106;DistBack=2;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=60;REFWIDENED=12:13504645-13504704;PctSeqSimilarity=0.9917;PctSizeSimilarity=1;PctRecOverlap=0.8692;SizeDiff=0;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=95;MatchId=1119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:39:0|1:37:4:3:37:./.:11:1:3:11:0/1:22:13:./.:.:.:.:.:.
chr12	14173869	HG3_Ill_MetaSV_1065	T	TCATAAATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGACACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4363:HG2_PB_pbsv_13015:HG4_PB_HySA_18884:HG4_PB_pbsv_13006:HG2_PB_SVrefine2Falcon1plusDovetail_2364:HG3_PB_assemblyticsfalcon_5337:HG3_PB_SVrefine2PBcRDovetail_6126:HG2_PB_SVrefine2Falcon2Bionano_6411:HG3_PB_pbsv_12700:HG4_Ill_MetaSV_1017:HG3_Ill_MetaSV_1065:HG2_Ill_MetaSV_968:HG3_PB_HySA_19564;NumClusterSVs=13;ExactMatchIDs=HG3_Ill_MetaSV_1065:HG4_Ill_MetaSV_1017;NumExactMatchSVs=2;ClusterMaxShiftDist=0.101911;ClusterMaxSizeDiff=0.101911;ClusterMaxEditDist=0.203822;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=1906;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=12:14173870-14173879;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:31:./.:16:28:16:9:1|0:0:8:34:0:0/1:30:14:0/1:6:35:.:.:.
chr12	14419176	HG2_PB_SVrefine2Falcon1plusDovetail_2366	C	CAAAAATTAGCTGGGTCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_19570:HG3_PB_pbsv_12702:HG3_PB_assemblyticsfalcon_5340:HG2_PB_HySA_23611:HG2_PB_pbsv_13018:HG3_Ill_MetaSV_1066:HG3_Ill_GATKHCSBGrefine_8578:HG2_PB_SVrefine2Falcon2Bionano_6413:HG2_PB_SVrefine2Falcon1plusDovetail_2366:HG2_Ill_MetaSV_969:HG2_Ill_GATKHCSBGrefine_8683:HG3_PB_SVrefine2PBcRDovetail_6127;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8683:HG2_Ill_MetaSV_969:HG2_PB_SVrefine2Falcon1plusDovetail_2366:HG2_PB_SVrefine2Falcon2Bionano_6413:HG3_Ill_GATKHCSBGrefine_8578:HG3_Ill_MetaSV_1066;NumExactMatchSVs=6;ClusterMaxShiftDist=0.142165;ClusterMaxSizeDiff=0.142165;ClusterMaxEditDist=0.239095;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=312;DistBack=75437;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=12:14419177-14419192;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:21:22:./.:10:8:6:15:1|0:0:6:22:0:0/1:27:14:1/1:2:41:.:.:.
chr12	14476753	HG2_10X_SVrefine210Xhap12_9105	T	TGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTGAAAATACAAAAATTAGCCAGGCTTGGTGGTGCATGCCTGTAATTCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCAAGATCCTGCCACTGCACTCCAGCCTAGGCGACAGACCAAGACTCTGTCTCAAAAAAAAAAAAAAGAAAAAAAAAATATATGTATGTGTGTGTGTGTATATTCTTTTTTTTTTTTTTGAGATGGAGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCAAATTCACGCCATTCCCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCTCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTGGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACACCTGTGAGCCACAGCGCCTGGCCAACATCATCTTATTCTAAAACATTTCATTTTGCCGGGTGCGGTGGCTCAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9105:HG3_PB_pbsv_12703:HG4_PB_HySA_18893:HG4_PB_pbsv_13011:HG4_Ill_GATKHCSBGrefine_8942:HG4_PB_HySA_18892:HG2_PB_pbsv_13020:HG3_PB_HySA_19572:HG2_PB_PB10Xdip_6923:HG2_PB_PB10Xdip_6922:HG4_Ill_MetaSV_1019:HG2_Ill_MetaSV_970:HG3_Ill_MetaSV_1067:HG3_Ill_GATKHCSBGrefine_8579:HG2_Ill_GATKHCSBGrefine_8684:HG4_Ill_GATKHCSBGrefine_8941:HG2_PB_HySA_23614:HG4_Ill_SVrefine2DISCOVARDovetail_9239:HG2_PB_SVrefine2PBcRplusDovetail_2254:HG2_PB_SVrefine2Falcon2Bionano_6414:HG3_PB_SVrefine2PBcRDovetail_6128:HG2_PB_SVrefine2PB10Xhap12_9392:HG2_PB_SVrefine2Falcon1plusDovetail_2367:HG2_Ill_SVrefine2DISCOVARplusDovetail_2601;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9105:HG2_PB_SVrefine2PB10Xhap12_9392:HG2_PB_SVrefine2Falcon1plusDovetail_2367:HG2_Ill_SVrefine2DISCOVARplusDovetail_2601;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0433039;ClusterMaxSizeDiff=0.0384;ClusterMaxEditDist=0.201416;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=613;DistBack=5542;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=234;REFWIDENED=12:14476754-14476987;PctSeqSimilarity=0.991;PctSizeSimilarity=0.9984;PctRecOverlap=0.8195;SizeDiff=-1;StartDistance=-110;EndDistance=-110;GTMatch=1;TruScore=93;MatchId=1123.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:1:35:0:16:./.:1:3:0:6:1/1:0:25:1/1:4:80:.:.:.
chr12	16232273	HG3_Ill_250bpfermikitraw_16836	C	CATATATATATATATATATATATATATATATATGTATATATATATATATATATGTAT	20	PASS	ClusterIDs=HG4_PB_HySA_18901:HG2_PB_HySA_23624:HG2_PB_pbsv_13022:HG2_PB_PB10Xdip_6942:HG3_PB_pbsv_12707:HG3_Ill_manta_2945:HG3_Ill_Spiral_13509:HG3_Ill_GATKHC_20650:HG3_Ill_GATKHCSBGrefine_8584:HG3_Ill_250bpfermikitraw_16836:HG3_Ill_150bpfermikitraw_16343:HG2_Ill_GATKHC_20783:HG2_Ill_GATKHCSBGrefine_8688:HG2_Ill_250bpfermikitraw_17326:HG4_Ill_GATKHC_20777:HG4_Ill_GATKHCSBGrefine_8946:HG4_Ill_150bpfermikitraw_16499:HG2_Ill_manta_3601:HG4_PB_pbsv_13014;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17326:HG2_Ill_GATKHCSBGrefine_8688:HG2_Ill_GATKHC_20783:HG3_Ill_150bpfermikitraw_16343:HG3_Ill_250bpfermikitraw_16836:HG3_Ill_GATKHCSBGrefine_8584:HG3_Ill_GATKHC_20650:HG3_Ill_Spiral_13509:HG3_Ill_manta_2945;NumExactMatchSVs=9;ClusterMaxShiftDist=0.14876;ClusterMaxSizeDiff=0.115702;ClusterMaxEditDist=0.266667;PBcalls=6;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=12:16232274-16232290;PctSeqSimilarity=0.9821;PctSizeSimilarity=0.9643;PctRecOverlap=0.9649;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:5:0:5:./.:0:4:1:8:1/1:0:28:./.:.:.:.:.:.
chr12	16520839	HG4_Ill_GATKHCSBGrefine_8947	T	TATTTTTTCCTGTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4364:HG2_PB_pbsv_13024:HG4_PB_HySA_18905:HG4_PB_pbsv_13015:HG4_Ill_svaba_16218:HG2_PB_HySA_23630:HG2_Ill_svaba_16160:HG2_PB_SVrefine2PB10Xhap12_9395:HG2_PB_PB10Xdip_6947:HG2_PB_SVrefine2PBcRplusDovetail_2256:HG2_PB_PB10Xdip_6946:HG4_Ill_GATKHC_20782:HG4_Ill_GATKHCSBGrefine_8947:HG2_PB_SVrefine2Falcon1plusDovetail_2369:HG2_Ill_manta_3602:HG2_Ill_GATKHC_20787:HG2_Ill_GATKHCSBGrefine_8689:HG2_10X_SVrefine210Xhap12_9110;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9110:HG2_Ill_GATKHCSBGrefine_8689:HG2_Ill_GATKHC_20787:HG2_Ill_manta_3602:HG2_PB_SVrefine2Falcon1plusDovetail_2369:HG4_Ill_GATKHCSBGrefine_8947:HG4_Ill_GATKHC_20782;NumExactMatchSVs=7;ClusterMaxShiftDist=0.358491;ClusterMaxSizeDiff=0.339623;ClusterMaxEditDist=0.396226;PBcalls=9;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=58;DistBack=1226;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=12:16520840-16520856;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1125.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:30:./.:7:22:9:3:1|0:2:28:19:0:0/1:20:8:./.:.:.:.:.:.
chr12	17827816	HG2_PB_SVrefine2Falcon2Bionano_6416	C	CATTTGTGAACTCAATAAATGCATTTGCAGCATATTGTGGAGTCAAATGCCTGAAAGAAGGTGATTGAAGGAAAAAATGGGAGGAGGGGAGTTTTTCTGTTAAAGGTAAGAAAAAACAATGGAGTAACAGCTAGAGGAAAATATAGATGTAGAAAGTTTTCTTTTTAATGTGGAAGAAATTACAGTATATATGTACAAAATATGTTTAGAAGATAATCCGGTTGAGAGGGAAAGTCAACAGTCACTT	20	PASS	ClusterIDs=HG2_Ill_Spiral_886:HG2_PB_pbsv_13026:HG2_PB_SVrefine2PBcRplusDovetail_2258:HG3_PB_pbsv_12710:HG2_PB_SVrefine2PB10Xhap12_9397:HG2_10X_SVrefine210Xhap12_9115:HG2_PB_assemblyticsPBcR_5175:HG2_PB_SVrefine2Falcon1plusDovetail_2371:HG3_Ill_svaba_16306:HG3_Ill_MetaSV_1070:HG3_Ill_GATKHCSBGrefine_8589:HG2_PB_SVrefine2Falcon2Bionano_6416:HG2_Ill_svaba_16165:HG2_Ill_MetaSV_973:HG2_Ill_GATKHCSBGrefine_8691:HG3_PB_assemblyticsfalcon_5354:HG4_PB_SVrefine2Falcon1Dovetail_7961:HG3_Ill_Cortex_761:HG2_Ill_Cortex_1755;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8691:HG2_Ill_MetaSV_973:HG2_Ill_svaba_16165:HG2_PB_SVrefine2Falcon2Bionano_6416:HG3_Ill_GATKHCSBGrefine_8589:HG3_Ill_MetaSV_1070:HG3_Ill_svaba_16306;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0864198;ClusterMaxSizeDiff=0.0823045;ClusterMaxEditDist=0.215139;PBcalls=9;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=246;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=12:17827817-17827816;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:36:0|1:19:0:0:35:0|1:19:0:0:20:0/1:27:14:./.:.:.:.:.:.
chr12	18248318	HG2_Ill_250bpfermikitraw_17337	C	CAGGAAAAGAGAAACAACAAAAAAGAAAGCAAGCAAGCAAGAGAGAGAGATAAAGAAAAGGAAGGAAGGA	20	PASS	ClusterIDs=HG4_PB_pbsv_13020:HG4_PB_HySA_18912:HG4_PB_HySA_18911:HG2_PB_pbsv_13028:HG3_PB_pbsv_12712:HG2_PB_PB10Xdip_6950:HG2_PB_PB10Xdip_6951:HG2_PB_HySA_23636:HG3_PB_assemblyticsfalcon_5358:HG4_Ill_svaba_16225:HG4_Ill_SVrefine2DISCOVARDovetail_9250:HG3_Ill_svaba_16308:HG2_Ill_svaba_16167:HG3_Ill_Krunchall_17340:HG3_Ill_GATKHCSBGrefine_8591:HG3_Ill_250bpfermikitraw_16848:HG3_Ill_150bpfermikitraw_16357:HG2_10X_SVrefine210Xhap12_9118:HG2_PB_assemblyticsPBcR_5178:HG2_PB_SVrefine2Falcon1plusDovetail_2373:HG2_PB_assemblyticsfalcon_5352:HG4_Ill_manta_3060:HG4_Ill_Krunchall_17991:HG4_Ill_GATKHC_20791:HG4_Ill_GATKHCSBGrefine_8951:HG4_Ill_250bpfermikitraw_17175:HG2_Ill_manta_3604:HG2_Ill_Krunchall_17680:HG2_Ill_GATKHC_20796:HG2_Ill_GATKHCSBGrefine_8693:HG2_Ill_250bpfermikitraw_17337;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17337:HG2_Ill_GATKHCSBGrefine_8693:HG2_Ill_GATKHC_20796:HG2_Ill_Krunchall_17680:HG2_Ill_manta_3604:HG4_Ill_250bpfermikitraw_17175:HG4_Ill_GATKHCSBGrefine_8951:HG4_Ill_GATKHC_20791:HG4_Ill_Krunchall_17991:HG4_Ill_manta_3060;NumExactMatchSVs=10;ClusterMaxShiftDist=0.333333;ClusterMaxSizeDiff=0.333333;ClusterMaxEditDist=0.366864;PBcalls=12;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=69;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=12:18248319-18248323;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1127.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:60:1/1:10:34:2:25:1/1:0:32:0:21:1/1:0:27:./.:.:.:.:.:.
chr12	18751615	HG3_PB_SVrefine2Falcon1Dovetail_7886	C	CAAAAGAAACTACCATCAGACACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGAGCGGTGGCGGCTCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCCAGACGCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7886:HG2_PB_pbsv_13032:HG3_PB_pbsv_12716:HG4_PB_pbsv_13023:HG2_PB_SVrefine2Falcon1plusDovetail_2374:HG3_PB_assemblyticsfalcon_5363:HG4_PB_assemblyticsfalcon_5253:HG4_PB_SVrefine2Falcon1Dovetail_7962;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7886:HG4_PB_SVrefine2Falcon1Dovetail_7962;NumExactMatchSVs=2;ClusterMaxShiftDist=0.169844;ClusterMaxSizeDiff=0.169844;ClusterMaxEditDist=0.229167;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=291;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=12:18751616-18751634;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9966;PctRecOverlap=0.9932;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:38:0|1:32:3:0:32:1|0:0:7:21:0:0/1:22:7:./.:.:.:.:.:.
chr12	19806207	HG2_PB_SVrefine2Falcon1plusDovetail_2377	T	TAAGAGGCATTAAGAGTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_HySA_18933:HG3_PB_pbsv_12721:HG2_PB_pbsv_13035:HG4_PB_pbsv_13026:HG3_PB_assemblyticsfalcon_5374:HG3_PB_HySA_19610:HG2_PB_SVrefine2Falcon1plusDovetail_2377:HG3_PB_SVrefine2PBcRDovetail_6139:HG2_PB_HySA_23662;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2377;NumExactMatchSVs=1;ClusterMaxShiftDist=0.175258;ClusterMaxSizeDiff=0.175258;ClusterMaxEditDist=0.189003;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=288;DistBack=11968;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:19806208-19806222;PctSeqSimilarity=0.9948;PctSizeSimilarity=0.9965;PctRecOverlap=0.9931;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1129.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:31:1:0:29:0|1:19:0:0:8:0/1:21:3:./.:.:.:.:.:.
chr12	19951522	HG2_Ill_GATKHCSBGrefine_8709	G	GAGCGAGACTCTGTCTCAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAGAATCCCCTTCTTTATAAAAGAAGATCGTCTGGTGT	20	PASS	ClusterIDs=HG4_PB_pbsv_13029:HG2_PB_HySA_23665:HG3_PB_pbsv_12722:HG3_PB_HySA_19612:HG4_PB_HySA_18936:HG2_Ill_GATKHCSBGrefine_8709:HG3_PB_assemblyticsfalcon_5376;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8709;NumExactMatchSVs=1;ClusterMaxShiftDist=0.120482;ClusterMaxSizeDiff=0.120482;ClusterMaxEditDist=0.22619;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=83;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=12:19951521-19951523;PctSeqSimilarity=0.9941;PctSizeSimilarity=0.9881;PctRecOverlap=0.9765;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:35:./.:12:26:21:9:0|1:24:0:0:10:0/1:36:5:./.:.:.:.:.:.
chr12	20064408	HG4_Ill_GATKHCSBGrefine_8968	T	TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTC	20	PASS	ClusterIDs=HG4_PB_pbsv_13030:HG4_Ill_GATKHC_20808:HG4_Ill_GATKHCSBGrefine_8968:HG4_Ill_250bpfermikitraw_17193:HG2_Ill_GATKHC_20819:HG2_Ill_GATKHCSBGrefine_8710:HG2_PB_pbsv_13038;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8710:HG2_Ill_GATKHC_20819:HG4_Ill_250bpfermikitraw_17193:HG4_Ill_GATKHCSBGrefine_8968:HG4_Ill_GATKHC_20808;NumExactMatchSVs=5;ClusterMaxShiftDist=0.10687;ClusterMaxSizeDiff=0.10687;ClusterMaxEditDist=0.195489;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=45;DistForward=41563;DistMin=45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=12:20064407-20064410;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:1|0:6:21:21:3:./.:3:18:14:0:0/1:24:12:./.:.:.:.:.:.
chr12	20908670	HG4_Ill_GATKHCSBGrefine_8972	T	TAGTTCTTTATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_6964:HG4_PB_HySA_18945:HG4_PB_pbsv_13037:HG2_PB_pbsv_13042:HG2_PB_HySA_23674:HG2_PB_assemblyticsPBcR_5203:HG2_Ill_breakscan11_4366:HG2_Ill_MetaSV_976:HG2_PB_SVrefine2Falcon1plusDovetail_2382:HG2_PB_SVrefine2PBcRplusDovetail_2268:HG4_Ill_SVrefine2DISCOVARDovetail_9268:HG4_Ill_MetaSV_1026:HG4_Ill_GATKHCSBGrefine_8972:HG2_PB_SVrefine2PB10Xhap12_9406:HG2_Ill_GATKHCSBGrefine_8713:HG2_PB_HySA_23673:HG2_PB_PB10Xdip_6965;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8713:HG2_PB_SVrefine2PB10Xhap12_9406:HG4_Ill_GATKHCSBGrefine_8972:HG4_Ill_MetaSV_1026:HG4_Ill_SVrefine2DISCOVARDovetail_9268;NumExactMatchSVs=5;ClusterMaxShiftDist=0.120063;ClusterMaxSizeDiff=0.120063;ClusterMaxEditDist=0.21485;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=319;DistBack=8718;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:20908671-20908685;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:15:51:0|1:18:0:3:46:./.:1:4:20:0:0/1:27:16:0/1:9:31:.:.:.
chr12	22085943	HG2_Ill_MetaSV_978	A	AAAGAAAATGTGGGCCGGGCGCGGTGGCTCGCGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAGTCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAACAAACAAAAAAAACAAACAAAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2385:HG2_PB_HySA_23687:HG4_PB_pbsv_13040:HG2_PB_pbsv_13045:HG3_PB_assemblyticsfalcon_5395:HG4_PB_HySA_18956:HG2_PB_HySA_23686:HG4_PB_HySA_18955:HG4_PB_SVrefine2Falcon1Dovetail_7964:HG4_Ill_MetaSV_1028:HG2_Ill_MetaSV_978;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_MetaSV_978:HG4_Ill_MetaSV_1028;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0619469;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.149425;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=334;DistBack=17494;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=12:22085944-22085955;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:34:1|0:7:24:28:0:1|0:0:15:34:0:0/1:24:20:0/1:11:43:.:.:.
chr12	22123784	HG2_PB_HySA_23690	C	CCCTTCATTTTTTTTTTTTTTTTTTTTTTTTTTGACGAGTCTCGCCTTCGCCAGCTGGAGTGCAGGCGGGATTCGCTCATGCAAGCTCGCTCGTTCAGCCATTCTCTGCTCAGCCTCAGTAGTGATACAGGCGCCCGCACTACGCCGGCTAATTTTTGTATTTAGCGGGGTTCACCGTTTTAGCCGGATGGTCTCATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCAAAGTCTGGATTACACTGAGCCACCGCCGGCCT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4367:HG2_PB_pbsv_13046:HG2_PB_SVrefine2Falcon1plusDovetail_2386:HG4_PB_pbsv_13041:HG2_PB_SVrefine2PB10Xhap12_9408:HG2_PB_HySA_23690:HG2_PB_HySA_23689:HG4_PB_HySA_18958;NumClusterSVs=8;ExactMatchIDs=HG2_PB_HySA_23690;NumExactMatchSVs=1;ClusterMaxShiftDist=0.257426;ClusterMaxSizeDiff=0.257426;ClusterMaxEditDist=0.326733;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=263;DistBack=-6604;DistForward=1;DistMin=-6604;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=12:22123785-22123789;PctSeqSimilarity=0.9002;PctSizeSimilarity=0.8168;PctRecOverlap=0.8142;SizeDiff=-59;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=84;MatchId=1134.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:30:./.:10:12:4:4:1|0:0:9:19:0:0/1:13:7:./.:.:.:.:.:.
chr12	23022371	HG2_Ill_SVrefine2DISCOVARplusDovetail_2633	T	TATATAATATATATATATAATATTTATATATATTATATTTATATATATTATATATAAATATAATATAATATATAAATAATATATATTTATATATAATATGTAATATATATTATATAATAATATGTAAATAATATATATAATATATATATTTCATATATATTATATAATATATATTACATAATACTATATATTTTATATATAATATAATATATATTATATATAAAATATATATATATTATTATATATATATATAATAATATAATATATATTATATATAAAATATATATTTTATATATATTATATAATAAATATAATATATTATATATATTATATAATATATAATATAATATATATTTTATAATATATTATATA	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_9280:HG2_Ill_manta_3607:HG2_Ill_SVrefine2DISCOVARplusDovetail_2634:HG2_Ill_breakscan11_4368:HG3_Ill_manta_2949:HG4_PB_HySA_18963:HG3_Ill_GATKHCSBGrefine_8606:HG3_PB_HySA_19638:HG4_Ill_MetaSV_1030:HG2_Ill_GATKHCSBGrefine_8720:HG4_Ill_GATKHCSBGrefine_8977:HG2_PB_PB10Xdip_7028:HG3_PB_HySA_19637:HG2_PB_PB10Xdip_7027:HG2_PB_pbsv_13050:HG2_PB_SVrefine2PBcRplusDovetail_2274:HG4_PB_pbsv_13044:HG2_PB_SVrefine2PB10Xhap12_9415:HG2_PB_SVrefine2Falcon2Bionano_6428:HG2_Ill_SVrefine2DISCOVARplusDovetail_2633:HG2_PB_SVrefine2Falcon1plusDovetail_2391:HG3_PB_SVrefine2PBcRDovetail_6146;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2633:HG2_PB_SVrefine2Falcon2Bionano_6428:HG2_PB_SVrefine2PB10Xhap12_9415:HG2_PB_SVrefine2PBcRplusDovetail_2274;NumExactMatchSVs=4;ClusterMaxShiftDist=0.336283;ClusterMaxSizeDiff=0.336283;ClusterMaxEditDist=0.35503;PBcalls=12;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=371;DistBack=27299;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=352;REFWIDENED=12:23022372-23022723;PctSeqSimilarity=0.9635;PctSizeSimilarity=0.9562;PctRecOverlap=0.4756;SizeDiff=-17;StartDistance=-195;EndDistance=-195;GTMatch=0;TruScore=79;MatchId=1135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:0:15:0:7:./.:0:1:0:2:1/1:0:8:1/1:2:34:.:.:.
chr12	24518611	HG2_PB_SVrefine2Falcon1plusDovetail_2397	T	TTGATTAATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4369:HG3_PB_pbsv_12744:HG2_PB_PB10Xdip_7035:HG2_PB_pbsv_13058:HG3_PB_assemblyticsfalcon_5420:HG3_PB_HySA_19655:HG2_PB_assemblyticsPBcR_5242:HG2_PB_SVrefine2PBcRplusDovetail_2278:HG2_PB_SVrefine2Falcon1plusDovetail_2397:HG2_PB_SVrefine2PB10Xhap12_9419:HG3_PB_SVrefine2PBcRDovetail_6150:HG2_PB_HySA_23714;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2397;NumExactMatchSVs=1;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.121951;ClusterMaxEditDist=0.188906;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=337;DistBack=-16;DistForward=11012;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=12:24518612-24518627;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9912;PctRecOverlap=0.9883;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1136.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:30:./.:14:8:1:22:0|1:24:0:0:5:0/1:35:10:0/1:6:23:.:.:.
chr12	25462933	HG4_Ill_GATKHCSBGrefine_8992	G	GAAAGATGCAGGGATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAAAAAAATACAAAAAATTAGCCGGGCATAGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_23731:HG4_PB_pbsv_13056:HG2_PB_pbsv_13065:HG4_PB_HySA_19001:HG3_PB_assemblyticsfalcon_5433:HG4_PB_HySA_19000:HG3_PB_SVrefine2Falcon1Dovetail_7890:HG4_PB_SVrefine2Falcon1Dovetail_7965:HG2_PB_SVrefine2Falcon2Bionano_6437:HG4_Ill_SVrefine2DISCOVARDovetail_9298:HG4_Ill_MetaSV_1033:HG4_Ill_GATKHCSBGrefine_8992:HG2_Ill_MetaSV_983:HG2_Ill_GATKHCSBGrefine_8733:HG2_PB_SVrefine2Falcon1plusDovetail_2402:HG2_Ill_breakscan11_4370;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8733:HG2_Ill_MetaSV_983:HG4_Ill_GATKHCSBGrefine_8992:HG4_Ill_MetaSV_1033:HG4_Ill_SVrefine2DISCOVARDovetail_9298;NumExactMatchSVs=5;ClusterMaxShiftDist=0.132921;ClusterMaxSizeDiff=0.132921;ClusterMaxEditDist=0.241113;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=84686;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=12:25462934-25462949;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:25:0|1:40:1:0:22:1|0:0:10:11:0:0/1:27:17:0/1:8:36:.:.:.
chr12	25499684	HG2_PB_PB10Xdip_7060	T	CCCCCCTCCCTCCCACCCCCTCCCTTCTCCTCCCCTCCCCCTCCCTTCCCCTCCCCTCCCTTCCCTCCCTTCTCCTCCCCTCCCCCTCCCTTCCCCGCCCCCTCCCTTCCCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTCTTCCCCTCCCCCTCCCTTCCCTCCCTTCCCCCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTCCTCTGCTCCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTCCCTCCCTTCCCCCTCCCTTCTCCTCCCCTCCCCTCCCCTCTCTTCCGCTCCCCCTCCCTTCCCTCCCTTCCCCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTCCTCTGCTCCCCCTCCCCTCCCCCTCCCCTCCCCCTCCCCTCTCCTCTGCTCCCCCTCCCCTGCCCCTCCCCTCTACTCCCCTCCCCCTCCCCTCTACTCCCTTCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCTCCCCTCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTCCCTCCCTTCCCCCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTCTTCCCCTCCCCCTCCCTTCCCTCCCTTCCCCCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTCCTCTGCTCCCCCTCCCCTCCCCCTCCCCTCCCCCTCCCCTCTCCTCTGCTCCCCCTCCCCTGCCCCTCCCCTCTACTCCCCTCCCCTCCCCTCTACTCCCCTTCCCCTCCCCTCTACTCCCCTTCCCCTCCCCTCTACTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCCTCTACTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCCCTCCCCCTCCCCTCTACTCCCCTTCCCCTCCCTTTCCTCCCTTTCCCTCTCCCTTCTCCTCCCCTCCCCTCCCCTCTCCTCCCCTCCCCTCCCTTCCCTCCCTTCCCTCCCTTCCCCTTCCCTTCCCTCCCTTCCCCCTCCCTTCTCCTCCCCTCCCCCTCCCCTCTCCTCCCCTCCCTCTCCCTTCTCCTCCCCCCTTCCTTTCCCTCCCTTCCCCCTCCCTTCTCCTCCCCTCCCCCTCCCATCTCCTCCCCTC	10	PASS	ClusterIDs=HG4_PB_pbsv_13057:HG3_PB_HySA_19667:HG2_PB_HySA_23734:HG2_PB_PB10Xdip_7061:HG2_PB_PB10Xdip_7060:HG3_PB_assemblyticsfalcon_5435:HG2_PB_SVrefine2Falcon1plusDovetail_2403:HG2_PB_SVrefine2Falcon2Bionano_6438:HG3_PB_pbsv_12748:HG2_PB_assemblyticsPBcR_5254:HG2_PB_SVrefine2PBcRplusDovetail_2282:HG2_PB_SVrefine2PB10Xhap12_9425:HG2_PB_HySA_23733:HG2_PB_pbsv_13066;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_7060;NumExactMatchSVs=1;ClusterMaxShiftDist=0.13717;ClusterMaxSizeDiff=0.13717;ClusterMaxEditDist=0.210104;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1546;DistBack=-42;DistForward=3;DistMin=-42;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=12:25499676-25499728;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9942;PctRecOverlap=0.9949;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:./.:0:3:0:0:./.:0:1:1:2:./.:0:6:0/1:14:45:.:1462:.
chr12	26650421	HG2_Ill_150bpfermikitraw_16398	T	TCAATGCCTGAAATGATCTTCCTCCGTCTTACCTATGAACTGGTCCTATCTTCCCTCTTCATTCTACAAATATTCATTAGGTGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_7065:HG2_PB_pbsv_13072:HG4_PB_HySA_19009:HG3_PB_pbsv_12754:HG2_PB_HySA_23747:HG4_PB_pbsv_13062:HG3_PB_HySA_19677:HG4_Ill_svaba_16294:HG4_Ill_manta_3068:HG4_Ill_Krunchall_18067:HG4_Ill_GATKHCSBGrefine_8996:HG4_Ill_Cortex_726:HG4_Ill_250bpfermikitraw_17250:HG4_Ill_150bpfermikitraw_16589:HG3_Ill_svaba_16381:HG3_Ill_manta_2956:HG3_Ill_Spiral_13576:HG3_Ill_Krunchall_17415:HG3_Ill_GATKHCSBGrefine_8622:HG3_Ill_Cortex_772:HG3_Ill_250bpfermikitraw_16922:HG3_Ill_150bpfermikitraw_16436:HG2_PB_assemblyticsPBcR_5263:HG2_Ill_svaba_16241:HG2_Ill_manta_3613:HG2_Ill_Krunchall_17757:HG2_Ill_GATKHCSBGrefine_8738:HG2_Ill_Cortex_1784:HG2_Ill_250bpfermikitraw_17417:HG2_Ill_150bpfermikitraw_16398:HG2_PB_PB10Xdip_7066;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16398:HG2_Ill_250bpfermikitraw_17417:HG2_Ill_Cortex_1784:HG2_Ill_GATKHCSBGrefine_8738:HG2_Ill_Krunchall_17757:HG2_Ill_manta_3613:HG2_Ill_svaba_16241:HG2_PB_assemblyticsPBcR_5263:HG3_Ill_150bpfermikitraw_16436:HG3_Ill_250bpfermikitraw_16922:HG3_Ill_Cortex_772:HG3_Ill_GATKHCSBGrefine_8622:HG3_Ill_Krunchall_17415:HG3_Ill_Spiral_13576:HG3_Ill_manta_2956:HG3_Ill_svaba_16381:HG4_Ill_150bpfermikitraw_16589:HG4_Ill_250bpfermikitraw_17250:HG4_Ill_Cortex_726:HG4_Ill_GATKHCSBGrefine_8996:HG4_Ill_Krunchall_18067:HG4_Ill_manta_3068:HG4_Ill_svaba_16294;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0924855;ClusterMaxSizeDiff=0.0809249;ClusterMaxEditDist=0.284091;PBcalls=9;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=83;DistBack=26184;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=12:26650422-26650425;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1140.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:61:1/1:3:25:3:27:1/1:1:39:0:32:1/1:0:13:./.:.:.:.:.:.
chr12	27864795	HG2_PB_SVrefine2Falcon2Bionano_6443	A	AATAATTGTCTATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_19692:HG3_PB_pbsv_12760:HG4_PB_pbsv_13066:HG2_PB_pbsv_13076:HG2_PB_assemblyticsfalcon_5447:HG2_PB_HySA_23765:HG2_Ill_breakscan11_4371:HG4_Ill_MetaSV_1041:HG4_Ill_GATKHCSBGrefine_8999:HG3_Ill_GATKHCSBGrefine_8624:HG2_PB_SVrefine2Falcon2Bionano_6443:HG2_PB_SVrefine2Falcon1plusDovetail_2409:HG2_Ill_MetaSV_987:HG2_Ill_GATKHCSBGrefine_8740:HG3_Ill_MetaSV_1085:HG3_PB_SVrefine2Falcon1Dovetail_7891;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8740:HG2_Ill_MetaSV_987:HG2_PB_SVrefine2Falcon1plusDovetail_2409:HG2_PB_SVrefine2Falcon2Bionano_6443:HG3_Ill_GATKHCSBGrefine_8624;NumExactMatchSVs=5;ClusterMaxShiftDist=0.127186;ClusterMaxSizeDiff=0.127186;ClusterMaxEditDist=0.197138;PBcalls=9;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=316;DistBack=62317;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=12:27864796-27864811;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:25:1|0:1:20:44:0:1|0:0:11:28:0:0/1:18:11:0/1:12:34:.:.:.
chr12	28226428	HG4_PB_pbsv_13068	A	ATTTGTTTTTTTGTTTTTCTTTTTTTTTTATTTTTTTATTAGACTACTAAGTTTTAGTACATGTGGCACATTGTGGCAGTTACATATGTATACATGTGTTCATGCTGGTGCGCTGCCACCACTACGTGTCATCTAGCATTTAGGTATATCTCCCAATTGCTATCCCTCCCCCCTCCCCGACCCCACCCACAGTCCCCAGAGTGTGATATTCCCCTTCTGTGTCCAATGTTCTCATGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTGTGTTCTTGCGATAGTTACTAGAATGATGGTTTCCATTCATCCATGTCCCTACAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATCATTGTTGCCACATTTCTTAATTCAGTCTATCATTGTTGACATGTGGGTTGGTTCCAATTCTTTTGCTATTGTGAATAGTCCGCAAATATAACACACGTGTGCATGTTTCTTTATAGCAGCATGATTTATAGTCCTTTGGTATATTACCATAAATGGGATAGCTATGGGTCAAATGGTATTTCTAAGTTCTAGATCCCTGGAGGAATCGCCACACTGACTTCCACAATGTTGAACTAGTTTACAGTCCCACCAACAGTGGAAAAGTTTCCTAATTTTCCACATCCTCTCCAGCACCTTTTGTTTCCTGAGCTTTTGTTAAGGATTGCCATTCTTAACTGGGTGAGATGATATTCTCATAGGTTTTGATTGCATTTCTTCTGATGGCCAGTATGATGAGCATTTCTTCATGTGTTTTTTGGCTTGCATTCAATGTCTTCTTTTGAGAAGTGTTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGTTGTTTGTTTTTTTCTTAAATTTGTTTGAGTTCATTGTAGATTTCTGGATATTAGCCCTTTGTCAGATGAAGGTGCGAAAATTTTCTTCCCATGTTGTAGGTTGCCTGTTCACTCTGAGGTAGTTTTTTTGCTGTGCAGAACTCTTTAGTTTAATTAAAGACCCATTTGTACAATTTTGGGCTTTTGTTGCAATTGCCTTTTGGTGTTTTGACATGAAAGTCCTTTTGCCCACCTATTTGTCCTAATGGTTAATGCCTAGGTTTTCTTCTAGGTTTTTTATGGTTTTAGGCTCTACGTTTAATCTTTTAAATCCATCTTGAATTATTTTTGTATAAGGTTAAGAAGATCAGTTTCAGCTTTCTACATATGCTAGCCAGTTTTCCCAGCCACCATTTATTAAATAGGGAAATCCTTCCCCATTGCTTGTTTTTCTCAGGTTGGCCAAGATCAGAATAGTTGTAGATATGGCATTATTTCTGAGGCTCTGTTCTGCCATGATCTATATCTCTGTTTTTGTACCAGTACCATGCGTTTTGCGTTACTGTAGCCTTTTAGTTATAGTTTTGAAGTCAGAGTGTATGCTCCAGCTTTGTTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCCTCTTTTTTGTTCCATATGACTTTAAATAGTTTTTTCAATTCTTGAAGAAAGTCAGTGGTAGCTTGATGGGGGATGGCATTGGAATCTGTAAATGACCTGGGCCAGTTATGGCCATTTTCACGTATTTGATTTCTTCCTACCCATGAGCATTGGAATGTTCTTCCATTGTTTATGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTAGTTCCCTTGAAGAGGTCCCTTCACATCCCATGTAAGTTGGATTCCTAGCTATTTTATTCTCTTTGTAAGCAATTTGAATGGGAGTTCACGTCATGATTTGGCTCTCTGTTTGGTCTTTTGTTGCGTTGTATAAGAATGCTTGTGATTTTGTTACATTGATTTTGTATCCTGACTCTGAAGTTGCTTATTCAGCTTAAGGTAAGATTGGCTGAGACGATGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACATTGACTTCCTCTTTTCTAATGAATACCCTTTATTTCCTTTCCTGCCTGATTGCCCTGGCCAGAATTCCAACCACTATTTGAATAGTAGCGGTGAGAGAGGGCATCCCTTCTTGTGCCAGTTTTCAAATGAATGCTTCAGTTTTTGCCCATTCATATGATATTGCTGTGCGCGTTTGTCATAGATAGCTCTTTATTATTTGAAAATACTTCCCATCAATACCTAATTTATGAGAGTTTTACAGGAAGGGTTGTTGAATTTTTGTTTTTCAAAGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTGTCTTTGGCTCTGTTTATATGCTGGATACATTTATTGATTGCGTATATTGAACCAGCCTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGAGAAGCTTTTTGATGGCTGCTGGATTTCGGTTTGCCAGTATTTTAGAGGATTTTTTGCTCAAGTCATCAAGATATTGCGTCTAAAAATTTCTCTTTTTTGGTTGTGTCTCTGCCGGCTTTGGTATCAGAATTATGCTGGCCTTCATAAAATGAGTTAGGAGGTATTCCCTCTTTTTCTATTGATTGGAATAGTTTTAGGAGGGAATGGTACCAGTTCCTCCTTGTACCTTCTGGTAGGAATTCGGCTGTGAATCCATTGTCCTGACTCTTTTTGTTGGCTAAACTATTTATTATTGCCACAATTTCAAGCCTGTTATTGTCTATTCAGAGAATTCAACTTCTCCTGGTTTAGTCTTGGAGAGTGATGGGTCGAGAATTATCCATTCTTCTAATTTCATATTTGTTAGAGTGGGATGTTTTAGTATTCTCTGGTGGTAAGTTTGTATTTCTTGTGGGATCAGTGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTCTTGATTTAGTCTTGACTAGCGTCCATCACTTTTGTTGATCCTTTCAAAAAAACCAGCTCCTGCGTCATCTGATTTTTTGAGGTGTGTTACTTCTGTCTCTATTTCCTCAGGTCTGCTCTGATTTTATTATTTCTTGCCTTCTGCTAGCGTTTTGAATGTGTTTGCTCTTGCTATTCTAGTTTCTTTAATTGGTGATGTATAGCTAGGTGTCAATTTTGATCTTTCCTGCTTTCTTCTTGTGGCATTTTAGTGCTAAAATTTCCCTCTACAACACTGCTTTGAATGAAGTCCAGAGATATCGGTATGTGTGGTCTTTGTTCTCGTTTTTCCAAGAACATCTTATTTCTGCCTTCATTTCGTAGTACCATAGTCATTCAGAGCAGGTTGTTCAGTTTCATGTAGTTGATGCTTTGAGTGAGAGTCTTAATCCCTGAGGTTCTGTGAGATTGCACTTGTGGTCTGGAGATAGTTTGTTATAATTTCTGTTCTTTACATTTGCTGAGGAGAGCTTACTTCCAAACATGTGTTCAATTTTGGAATAAGTTTGTGTGCTGCTGAAAAAAAATGTATATTACTGTTGATTTGGGGTGGAGAGTTCTGTAAATGTCTATGGTCTGCTTGGGCAGAGTGAGTTCAATTCCTTGGATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAATGGCAGTGTTAAATCATCCCATTATTCAATGTTGAGTCTAAGTCTCTTGTAGGTCACCTCAGGACTTGCTTTTATGAATCTGGTGCTCCTGTATTGGAGTGGCATAAATATTAGAGATAGTTAGCTCCTCTTGTTGTTATTGATCCTTACCACTTATGTAAATCCTTCTTGTCTCTTTTATCCTTTGTTGGTTTAAAGTCTGTTTTTTCAAGCTAGGATTGCAAACCCCTGCCTTTTTTGTTTTCCATTGGCTGGTAGATCTCCCCATCTGTTATTTTGAGCCTATGTGTGTCTCTGCACGGGAATGTTCCTTGAATACAGCACACTGATGGTCTTGACTCTTTATCCAACTTGCCGTCTGGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTTAAAGTTAATATTCATGTGTGAATTTGATCCTTCATTATGATGTTACTGGTTGATTTTGCTCATAGTTGATTGCAGTTTCTTCCTAGTCCGATGTCTTTACATTTTGCATGATTTTTCAGCGCTGGTACGTTGTTCCTTTCCATGTTTAGCGTCCTTACAGGAAGCTCTTTTAGCAGGCCTGGTGTGACAAAATCTCTAGCATTGCTTGTCTATAAAGTATTTTATTTCTCCCTTCACTTATTGAAGCTTTAGTTCGGCTGATATGAAAATCTTGGTTGAAAAATTCTTTTCTTTAAGAATGTTGAAATATTGCCCCCCACTCTCTTCTGGCTTGTAGTTTCTGCGAGAGATCCGCTGTTGTCTGAGGCTTTGCCTTTGAGGGTAACCGACCTTTCTTCTTGGCGTGCCCTGTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCCTTGGAGTTGCTCGTCTCGAGGAGTATCTTTGGCTTCTCTGTATCTTCCTGAAGCTGAACGTTGCCTGCCTTGCTAGATTGGGAAGTTCTCTGGATAATATCCTGCCAGAGTGTTTTCCACTTGGTTCCATCTCCCATCACTTTCAGTACACCAATCAGACGTGTAAGATTTGCTTTTCACATAGTCCCCATATTTTGGAGTTTGCTCAATTTCTTTTTTATTCTTTTTTTTCTCTAAACTTCCCTTCTCCGCTCATTTCATTCATTCATCTTCATTGTCTATTACCCTTTTTCCAGTTGACGCACGGCTCCTGAGGCTTCTGCATTCTTTCACGTATTCTCGAGCCTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCGCTGTATTGCGTTATTTCTAGTTATACATTCTTCTAAATTTTTTTTCAAAAGTTTGCAACTTCTTTGCTTGTTGAATGTCCTCCCCGTAGCTCAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCTGTCAAAATCATCTCCAATCCAGCTTTTTCTGTGTGAAACTGCGTTCCTTTTGGAGGATGGAAGAGACGCTCTGCGTTTTGAGTTTCCAGTTTTTCTTTCTGTTTTTTCCCCATCTTTGTGTTTATCTACTATTAGGTCTTGGGATGATGTGATGTACAGATGGGTTTCAGGTTGTAGATTCCTTTCTGGTTGTTTAGTTTTCCTTCTAACGACAGGGGGACCCTCAAAGCTGCAGGTCTGTGGAATACCCTGCCGGTGACTGTTCAGTGTGCCCTGCTTGGGGGTGCCTCCCTCAGTTAGGCTGCTCGGGGGTCAGGGGTCACGGACCCACTTGAGGAGGCAGTCTGCCCCATTCTCAGATCTCCAGCTGCATTGTGAAACCACTGCTCTCCTTCAAAGCTGTCAGACAGGGACACTTAGTCTTGCAGAGGTACTGCTGTCTTTTTGTTTGTCTGTTCCTGCCCCCAGAGGTGGAGGCCTACAGGGCAGGCAGGCCTCCTTGAGCTGTGTGGGCCGTCCACCCAGTTCAGCATTCCTAGGCTGCTTGTTATACCAACAAGCCTGGGCAATGCGGGCCCCCTCCCCCAGCCTCGTTGCGCCCTTGCATTTATCTCAGAACTGCTGTGCTAGCAAATCAGTGAGATTCCGTGGCGTTAGACTCTGAGCCAGTTGTGGATATAGTCTCGTGGTGCGCCGTTTCTTTAAGCCGTCTGAAAGCGGCAATAATTTCGAGTGGAATGACCCGATTTTCCAGTGCGTCCGTCACCCCTTTCTTTGACTTGAAAGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCGCTTTGGCTCGCGCACTGTGCACGCACCCAACTGGCCCTGCCCACTGTCTGGCACTCCCTAGTGCAGTGAACGGTTACCTCAGATGGAAATGCAGAAATTCACCCGTCTTCTGACGTCGCTCACGCTGGGAGCTGTAGACCGGAGTTGTTCCTATTCAGCCAGTCTGGCTCCTCCTCCCTACATGCTACTGTATTCATT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9433:HG4_PB_pbsv_13068:HG2_PB_assemblyticsfalcon_5449:HG2_PB_PB10Xdip_7068:HG2_PB_SVrefine2Falcon1plusDovetail_2410;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_13068;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0169295;ClusterMaxSizeDiff=0.0162656;ClusterMaxEditDist=0.111499;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=5975;DistBack=4;DistForward=1419;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=12:28226416-28226428;PctSeqSimilarity=0.9494;PctSizeSimilarity=0.9852;PctRecOverlap=0.9852;SizeDiff=-90;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=97;MatchId=1142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:55:0|1:34:0:1:60:./.:31:0:2:7:0/1:25:13:0/1:233:43:.:6047:.
chr12	28417298	HG2_PB_SVrefine2Falcon2Bionano_6444	T	TAATAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGCGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCATCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9434:HG4_Ill_MetaSV_1042:HG4_PB_pbsv_13069:HG2_PB_pbsv_13078:HG2_PB_HySA_23769:HG2_PB_HySA_23768:HG4_PB_SVrefine2Falcon1Dovetail_7967:HG4_Ill_GATKHCSBGrefine_9001:HG2_PB_SVrefine2Falcon2Bionano_6444:HG2_Ill_MetaSV_988:HG2_Ill_GATKHCSBGrefine_8742;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8742:HG2_Ill_MetaSV_988:HG2_PB_SVrefine2Falcon2Bionano_6444:HG4_Ill_GATKHCSBGrefine_9001:HG4_Ill_MetaSV_1042;NumExactMatchSVs=5;ClusterMaxShiftDist=0.233276;ClusterMaxSizeDiff=0.233276;ClusterMaxEditDist=0.253859;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=309;DistBack=-4;DistForward=4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=12:28417299-28417311;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:44:0|1:36:1:1:37:1|0:0:10:29:0:0/1:27:9:0/1:7:41:.:.:.
chr12	29823935	HG2_Ill_GATKHCSBGrefine_8752	T	TGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCCGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAGAAATTAA	20	PASS	ClusterIDs=HG2_PB_HySA_23791:HG2_PB_PB10Xdip_7076:HG3_Ill_GATKHCSBGrefine_8632:HG2_Ill_GATKHCSBGrefine_8752:HG3_Ill_manta_2960:HG3_Ill_MetaSV_1090:HG2_PB_pbsv_13085:HG2_PB_HySA_23792:HG3_PB_HySA_19706:HG2_PB_SVrefine2Falcon1plusDovetail_2414:HG2_PB_SVrefine2Falcon2Bionano_6448:HG2_PB_SVrefine2PB10Xhap12_9440:HG2_PB_SVrefine2PBcRplusDovetail_2292:HG3_PB_pbsv_12768;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8752:HG3_Ill_GATKHCSBGrefine_8632;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0903226;ClusterMaxSizeDiff=0.0903226;ClusterMaxEditDist=0.195584;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=300;DistBack=-318;DistForward=4586;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=310;REFWIDENED=12:29823926-29824235;PctSeqSimilarity=0.9873;PctSizeSimilarity=0.9772;PctRecOverlap=0.9577;SizeDiff=-7;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=97;MatchId=1144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:41:0|1:25:1:1:37:./.:20:0:1:5:./.:32:2:0/1:11:11:.:.:.
chr12	30358060	HG3_PB_SVrefine2Falcon1Dovetail_7896	T	TATTTCGTATTATCGCACAGTCCGCCCTCTGGTCTCTGGCCACACACTTCTTATGGCAAAACAAAATAGAACTCAATAGATACGGGCACATTACTAGAGTCCCACTGAGTCATTAACAG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2669:HG3_PB_HySA_19715:HG2_PB_HySA_23797:HG3_PB_pbsv_12771:HG2_PB_assemblyticsfalcon_5468:HG2_PB_SVrefine2Falcon1plusDovetail_2416:HG4_PB_pbsv_13082:HG3_PB_SVrefine2Falcon1Dovetail_7896:HG2_PB_pbsv_13087:HG2_PB_SVrefine2Falcon2Bionano_6450;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2669:HG3_PB_SVrefine2Falcon1Dovetail_7896:HG2_PB_SVrefine2Falcon2Bionano_6450;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0813008;ClusterMaxSizeDiff=0.0650406;ClusterMaxEditDist=0.33871;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=118;DistBack=14428;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=236;REFWIDENED=12:30358061-30358296;PctSeqSimilarity=0.9789;PctSizeSimilarity=1;PctRecOverlap=0.8067;SizeDiff=0;StartDistance=-23;EndDistance=-23;GTMatch=0;TruScore=92;MatchId=1145.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:27:./.:22:3:7:20:./.:3:10:2:10:0/1:22:11:./.:.:.:.:.:.
chr12	30420645	HG2_Ill_MetaSV_992	T	TAAATTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGTAGTGGCACGATCTTGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTTTGTAGTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_19717:HG3_PB_pbsv_12773:HG2_PB_assemblyticsfalcon_5470:HG2_PB_SVrefine2Falcon2Bionano_6452:HG2_PB_pbsv_13089:HG3_Ill_MetaSV_1093:HG3_Ill_GATKHCSBGrefine_8636:HG2_Ill_MetaSV_992:HG2_PB_SVrefine2Falcon1plusDovetail_2418;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_MetaSV_992:HG3_Ill_GATKHCSBGrefine_8636:HG3_Ill_MetaSV_1093;NumExactMatchSVs=3;ClusterMaxShiftDist=0.166405;ClusterMaxSizeDiff=0.166405;ClusterMaxEditDist=0.220211;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=48897;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=12:30420646-30420657;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:16:0|1:21:0:1:33:./.:28:0:0:4:0/1:33:9:0/1:8:29:.:.:.
chr12	30501743	HG2_PB_PB10Xdip_7085	ATTTAG	TTGAATGCAATCATTTAAACTGTCCTGTGATTATGGGAGCTCACCTGGAACCCTCAGGTTATTTCAATTCTGTGTAAACACAGAACATAATGTAGAAGATCTGTTTGTGTGAAAACTCTGCTTCTCAAACATATTTGGACCCTGTCACAAGCATTCATCTATCTAAAGTTTGTTTAAAATGATGAATAATAAATCACCAATTATATCATGACTGTGGTCCTATCAAATTCCAGAATTAAGTTGAGCTGGAATTTGGCAGGCAGAGGTAAAGCCCATGACAGCGGGAGAGAAGGCTACTCAGAAGGCTCTATGCCCTCAAATAAGGACTAGCCCCCAGAATTTTGCAAGGAGGTACCATTCTTAAATGAAGATTCTGATCTTTGCAGATTTCTCTTTGCATGGGGACATACTGCTGTGGGATTCAGGAGGACCAGAGAGACCTTGGGGTGAATACAGGAGGATCTTTATTGAGTGCACTCAGACCCAGCGGACTTAACATCCAAAAACTGGGCCAAGGACAAAGACAGGTCTTGGCTTTTATACATACTTCAAAAGGGGTTGGCTAGTTTGAAGAAGCTTACAGTGGCTTGAAAGCAAGGATACAGAGGCAGAACAAAGACAGTTAATCAAATTATGACAGGTTCATAACTCAGGATTACACATGACCGTTTCCATGCAGCCCAGATGTCTGTTATCTAGGTTTGCTCTAGTGCCTAGCTCGGGCTTATCCCATAACCTTCACTATAGTGCCCAGGTGGCTGTATCTCAGGGCTGCTCAGATGGTTTATGACCTTCACTCCGCTGCTTAGATAAAACTACTTGAAGTCACTAGTTGCAGAAAACAGGAATCTATAAACCCATACCACAAAGAAAGGAAAATTTTTCCTTCTTCTCCCTATGTTGAGGGAGTGCTGGGAGAGTCTCCAGAGCACATTCATTTCTGTCCTAGTTTCTCAGATAGTGTTTATCAAGGCTTTTCCTGGATTTGGGCAGTGCCTGTTGCTGACTCTGGGAAAAGTCAGCCTAATACAGGAAGGCTTATTTCTCTTTCTTTTTAATTTTATTTTTCTTTATTTCTTTAATTTCTGCCTCAATACAGCAAACTGATTAAAAGTGGGGGCTCTGAAGCCAGGTTTGATTTTCAGTTTTATGATTTACTCACAATGTCAACTCCAAACAGTGAGTGTGAGGATTAAGTGAATTAATATATGAAAAACACTTAAAATAATGTTTAAACATCATAATTCATCAGTAAATGTTATCCATTATATATTATTGGTAATTGTGTGCAATATCTGTTAAAATTCCTGGGCTCAGCCAGGCGTAATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAGGCAGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAACATTAGCCAGGCATGGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGGGGGCAGAGCTTGCAGTGAGCTGAGATCGCACCATTGCACTCCAGCCTGGGTGACAGGGCGAGACTCCATCTCAAAAAAAAAAAAAAAAACATTCCTGGGCTCTTGTTAGGACTGAGATGTAATTTACATATAAGAAATATGTATCTAAGTGTACCATTCAATCAGTATTGATAAATGGGCATCAAGATACAGAACATTTCCACCATCACTCCTCTTTCCTCTATTCAGGTAACACCTCCCAATAAGTAGCCAATGATGCCATTTCTATTGCTATAGATTAGCTTTGGTCTATGGTAGAATTTCATATAAATGAGACCATATAATATGGACTTTTTTTTCTTGACTTCTTTCCCTTGCAGATTTTTTGGGGATTTACTTATTCTGTTGTAGCAATAGTTTGCTCCCTTTTATGGGTGAGCAGTATTTCATGTATGAATATACAATGTTAGAGACATCTGGGTTGTTTTCAGTTTGGGGCTATGATAAATAAAGCTACTATAAACATTCTGATAGCTTCAACTTCTTTTCAAAATATGAAATTGTCAGTCTTTTAAGTTATAGTCAGTTTATGACTATAGAATGGTATACCATTGTCATGTTCATGTGAACTCCCCTAATGATGGATTTTTAGCTTTTTCTTATGTGTTTATTGACCTTTTGTCATATTTTTTGTATGCTCTAGTCTTTTGCCCATTTTTTTAAATTGGAATTTTATCTTTTTTATTGTGGAGTTACATGAGTTCTTCACCTATTATGTTTACGAATCCTTCATCAGATACATGTGTTGCCCAAATTTTCTCAAAATCTATGACTTGTCTATTTATTTGATGACATATTTTAAAGAGCTAAAGCTTTAAATTTTAATAAAGTCTTTTTTCTCTTAGATTCAGCTACTTTTTTTCTAAGAAATATTTGCCCAGTACAAGTTTGCAAAGATATTTTTCTAAGATTTTGTTCATTAGCTCTATTTTTTAGTATTTACATTTTAGTTATATGATCTAATTTAAATTAATTTTTTGTGTATGGTGTGAGATGGGGATAGGCTTTTTTTAATCCTGTATTCCAACATGTTTGTTGAAGAGCTTCTCCTTTCTCCATTAGGTTGCTTTGGTGCTCTTGTTGAAAATCATTTAATTGTATATTTGGTCCTTTTTCTATACTCTCCATTTTGTCTAATTAATCTATTTGTTCTTTGCCAATATTACACTGATTTGGATTTAGTAGCTTTATGGTGAATCTTGAAGTCAGGTAGAGTAAATCATCCTTCTATTTGTTTTCTTTTTTTTTTTTTTTAAGATTGTCTTGATTATTCTTGGTCTTTTGCCTTTCCAATATTTTCAAATAATGTTTCATTGAAATAGCTTTAGATTTATAGAAAATTGCAAAGATCGTAAAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2295:HG2_PB_pbsv_13091:HG2_PB_HySA_23800:HG3_PB_HySA_19718:HG3_PB_pbsv_12774:HG2_PB_SVrefine2Falcon1plusDovetail_2420:HG2_PB_PB10Xdip_7086:HG2_Ill_SVrefine2DISCOVARplusDovetail_2671:HG2_PB_SVrefine2PB10Xhap12_9444:HG2_PB_PB10Xdip_7085:HG2_PB_SVrefine2Falcon2Bionano_6453:HG2_10X_SVrefine210Xhap12_9152;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_7085:HG2_PB_SVrefine2PB10Xhap12_9444;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0380856;ClusterMaxSizeDiff=0.0380856;ClusterMaxEditDist=0.154845;PBcalls=10;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=2915;DistBack=1315;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:30501749-30501742;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9979;PctRecOverlap=0.9997;SizeDiff=-6;StartDistance=-3;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:94:1/1:0:52:0:27:1/1:0:10:0:13:1/1:0:49:1/1:6:398:.:2757:.
chr12	31802792	HG2_PB_SVrefine2Falcon2Bionano_6455	G	GCAATTCTCCTGCCTCAGCCCCCTGAGTAGCTGGGATTACAGGCACGTACCACCACACCCAGCTAATTTATGTATTTTTAGTAGAGGTGGGGTTTTGCCATATTGGCCAGGTTGGTCTCGAACTCCTGGCCTCAAGTGATCCACCTGCCTCCCAAAGTGCTGGGATTACAGGCATGATCCACCACGCCCGGCCCCCACCCCCCAGCTTTTCTTTTTTCTTTTTTTTTTGAGACAGAGTCTCACTTTGTCACCAGGCTGGAATGCAGTGGTGAAATCTCAGCCCACTGCAGCTTCAAACTCCTGGGCTGAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6162:HG4_PB_pbsv_13094:HG3_PB_pbsv_12784:HG2_PB_pbsv_13096:HG2_PB_PB10Xdip_7090:HG4_Ill_MetaSV_1052:HG2_Ill_manta_3621:HG3_Ill_manta_2963:HG3_Ill_MetaSV_1097:HG3_Ill_GATKHCSBGrefine_8644:HG2_Ill_MetaSV_995:HG4_Ill_manta_3076:HG4_Ill_GATKHCSBGrefine_9025:HG2_Ill_GATKHCSBGrefine_8759:HG4_PB_HySA_19044:HG2_PB_HySA_23807:HG3_PB_SVrefine2Falcon1Dovetail_7901:HG4_PB_SVrefine2Falcon1Dovetail_7972:HG3_Ill_SVrefine2DISCOVARDovetail_9452:HG4_Ill_SVrefine2DISCOVARDovetail_9322:HG2_PB_SVrefine2PBcRplusDovetail_2297:HG2_PB_SVrefine2PB10Xhap12_9448:HG2_PB_SVrefine2Falcon2Bionano_6455:HG2_PB_SVrefine2Falcon1plusDovetail_2422:HG2_Ill_SVrefine2DISCOVARplusDovetail_2677:HG2_10X_SVrefine210Xhap12_9155:HG4_PB_SVrefine2PBcRDovetail_6566;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9155:HG2_Ill_SVrefine2DISCOVARplusDovetail_2677:HG2_PB_SVrefine2Falcon1plusDovetail_2422:HG2_PB_SVrefine2Falcon2Bionano_6455:HG2_PB_SVrefine2PB10Xhap12_9448:HG2_PB_SVrefine2PBcRplusDovetail_2297:HG4_Ill_SVrefine2DISCOVARDovetail_9322;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0476948;ClusterMaxEditDist=0.209857;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=310;DistBack=12409;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=181;REFWIDENED=12:31802793-31802973;PctSeqSimilarity=0.9667;PctSizeSimilarity=0.981;PctRecOverlap=0.4637;SizeDiff=-6;StartDistance=-167;EndDistance=-167;GTMatch=0;TruScore=80;MatchId=1148.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:49:1/1:5:22:1:22:./.:0:3:0:13:1/1:0:21:1/1:2:29:.:.:.
chr12	32076412	HG3_Ill_MetaSV_1098	T	TGAAATAATTGATCTCGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2298:HG3_PB_assemblyticsfalcon_5484:HG2_PB_PB10Xdip_7091:HG2_Ill_MetaSV_996:HG2_PB_pbsv_13097:HG4_PB_assemblyticsfalcon_5378:HG3_PB_pbsv_12785:HG2_PB_assemblyticsfalcon_5482:HG2_PB_HySA_23808:HG2_PB_SVrefine2PB10Xhap12_9449:HG3_PB_HySA_19732:HG4_PB_SVrefine2Falcon1Dovetail_7973:HG3_PB_SVrefine2PBcRDovetail_6163:HG3_Ill_SVrefine2DISCOVARDovetail_9454:HG3_Ill_MetaSV_1098:HG3_Ill_GATKHCSBGrefine_8645:HG2_Ill_SVrefine2DISCOVARplusDovetail_2679:HG2_PB_SVrefine2Falcon1plusDovetail_2423:HG3_PB_SVrefine2Falcon1Dovetail_7902;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2679:HG3_Ill_GATKHCSBGrefine_8645:HG3_Ill_MetaSV_1098:HG3_Ill_SVrefine2DISCOVARDovetail_9454:HG3_PB_SVrefine2PBcRDovetail_6163:HG4_PB_SVrefine2Falcon1Dovetail_7973;NumExactMatchSVs=6;ClusterMaxShiftDist=0.19398;ClusterMaxSizeDiff=0.19398;ClusterMaxEditDist=0.237458;PBcalls=14;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=314;DistBack=16563;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:32076413-32076427;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1149.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:18:0|1:17:0:0:22:0|1:25:0:0:8:0/1:22:8:0/1:6:20:.:.:.
chr12	32251799	HG2_Ill_manta_3622	T	TTCGAGGCCAGCCTGACCACCATGGAGAAACTCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCTTTGGCCGGGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGCTGGATCACGAGGTCAAGAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9450:HG4_PB_assemblyticsfalcon_5381:HG2_PB_assemblyticsfalcon_5486:HG2_PB_HySA_23812:HG4_PB_pbsv_13095:HG2_PB_pbsv_13098:HG2_PB_HySA_23811:HG4_PB_SVrefine2PBcRDovetail_6567:HG4_PB_SVrefine2Falcon1Dovetail_7974:HG4_Ill_manta_3077:HG4_Ill_MetaSV_1053:HG4_Ill_GATKHCSBGrefine_9026:HG3_Ill_manta_2964:HG3_Ill_MetaSV_1099:HG3_Ill_GATKHCSBGrefine_8646:HG2_PB_SVrefine2PBcRplusDovetail_2299:HG2_PB_SVrefine2Falcon2Bionano_6456:HG2_PB_SVrefine2Falcon1plusDovetail_2424:HG2_Ill_manta_3622:HG2_Ill_MetaSV_997:HG2_Ill_GATKHCSBGrefine_8760:HG2_PB_PB10Xdip_7093:HG2_PB_PB10Xdip_7092:HG3_PB_pbsv_12786:HG2_PB_HySA_23810:HG3_PB_SVrefine2PBcRDovetail_6164:HG3_PB_SVrefine2Falcon1Dovetail_7903;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8760:HG2_Ill_MetaSV_997:HG2_Ill_manta_3622:HG2_PB_SVrefine2Falcon1plusDovetail_2424:HG2_PB_SVrefine2Falcon2Bionano_6456:HG2_PB_SVrefine2PBcRplusDovetail_2299:HG3_Ill_GATKHCSBGrefine_8646:HG3_Ill_MetaSV_1099:HG3_Ill_manta_2964:HG4_Ill_GATKHCSBGrefine_9026:HG4_Ill_MetaSV_1053:HG4_Ill_manta_3077:HG4_PB_SVrefine2Falcon1Dovetail_7974:HG4_PB_SVrefine2PBcRDovetail_6567;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0675676;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.210169;PBcalls=18;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=145;DistBack=-56;DistForward=53;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=135;REFWIDENED=12:32251721-32251855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:40:0:17:1/1:1:15:0:9:1/1:0:26:./.:.:.:.:.:.
chr12	32358649	HG2_PB_PB10Xdip_7095	T	TTATATGTCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4372:HG3_PB_pbsv_12787:HG4_PB_pbsv_13096:HG2_PB_pbsv_13099:HG2_PB_assemblyticsfalcon_5488:HG4_PB_assemblyticsfalcon_5382:HG3_PB_assemblyticsfalcon_5489:HG2_PB_HySA_23815:HG4_PB_HySA_19048:HG4_PB_SVrefine2PBcRDovetail_6568:HG2_PB_SVrefine2PBcRplusDovetail_2300:HG2_PB_SVrefine2PB10Xhap12_9451:HG2_PB_SVrefine2Falcon2Bionano_6457:HG2_PB_PB10Xdip_7095:HG2_PB_PB10Xdip_7094:HG2_PB_SVrefine2Falcon1plusDovetail_2425:HG2_10X_SVrefine210Xhap12_9160:HG4_PB_SVrefine2Falcon1Dovetail_7975:HG3_PB_SVrefine2Falcon1Dovetail_7904:HG4_Ill_GATKHCSBGrefine_9027:HG3_PB_HySA_19735;NumClusterSVs=21;ExactMatchIDs=HG2_PB_PB10Xdip_7094:HG2_PB_PB10Xdip_7095:HG2_PB_SVrefine2Falcon2Bionano_6457;NumExactMatchSVs=3;ClusterMaxShiftDist=0.139881;ClusterMaxSizeDiff=0.139881;ClusterMaxEditDist=0.228228;PBcalls=18;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=340;DistBack=23464;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=12:32358650-32358663;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9942;PctRecOverlap=0.9942;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:10:0:7:./.:0:3:0:2:1/1:0:14:1/1:2:60:.:.:.
chr12	32486467	HG3_PB_SVrefine2Falcon1Dovetail_7905	TC	GCAGGCCGCGGTGGCTCACGCCTGTAATCCCAGCACTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGCGCAGCGGTGGCGGCGCCTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAGGTAGTG	20	PASS	ClusterIDs=HG4_PB_HySA_19057:HG2_PB_PB10Xdip_7100:HG2_PB_PB10Xdip_7101:HG3_PB_assemblyticsfalcon_5493:HG3_PB_SVrefine2Falcon1Dovetail_7905:HG2_PB_pbsv_13102:HG4_Ill_MetaSV_1055:HG2_Ill_MetaSV_999:HG2_PB_assemblyticsfalcon_5493:HG2_PB_SVrefine2Falcon1plusDovetail_2427:HG4_PB_pbsv_13100:HG2_PB_SVrefine2Falcon2Bionano_6459:HG2_PB_SVrefine2PB10Xhap12_9453:HG2_PB_SVrefine2PBcRplusDovetail_2301:HG2_PB_HySA_23821;NumClusterSVs=15;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7905:HG3_PB_assemblyticsfalcon_5493;NumExactMatchSVs=2;ClusterMaxShiftDist=0.163142;ClusterMaxSizeDiff=0.163142;ClusterMaxEditDist=0.247734;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=328;DistBack=1;DistForward=9807;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:32486469-32486466;PctSeqSimilarity=0.9825;PctSizeSimilarity=0.9848;PctRecOverlap=0.9424;SizeDiff=5;StartDistance=15;EndDistance=16;GTMatch=0;TruScore=96;MatchId=1152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:34:0|1:32:1:0:31:1|0:1:7:42:0:0/1:27:15:0/1:6:17:.:.:.
chr12	33140885	HG3_PB_HySA_19740	T	TAAGGACGAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGCGCCCGCCACCGCGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG3_PB_HySA_19740:HG3_PB_pbsv_12791:HG2_PB_pbsv_13108:HG4_PB_assemblyticsfalcon_5392:HG4_PB_SVrefine2Falcon1Dovetail_7979:HG2_PB_HySA_23830;NumClusterSVs=6;ExactMatchIDs=HG3_PB_HySA_19740;NumExactMatchSVs=1;ClusterMaxShiftDist=0.155224;ClusterMaxSizeDiff=0.155224;ClusterMaxEditDist=0.18209;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=325;DistBack=24491;DistForward=33683;DistMin=24491;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=12:33140886-33140886;PctSeqSimilarity=0.9863;PctSizeSimilarity=0.9789;PctRecOverlap=0.976;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:26:1|0:4:24:28:2:0|1:26:0:0:5:0/1:23:12:./.:3:40:.:.:.
chr12	38824344	HG2_PB_assemblyticsPBcR_5336	CTTACTCTGAAATTTT	ATTTTTTTTTTTTTTTTTTTTTTTTTCATTCTTTTTTTTTTTTCTTTTTTAATTATTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCACCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTGGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGACTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGACTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTAATGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4373:HG4_PB_pbsv_13128:HG2_PB_PB10Xdip_7420:HG2_PB_pbsv_13127:HG2_PB_assemblyticsPBcR_5336:HG2_PB_assemblyticsfalcon_5519:HG4_PB_HySA_19090:HG4_PB_SVrefine2PBcRDovetail_6576:HG2_PB_SVrefine2PBcRplusDovetail_2310:HG2_PB_SVrefine2PB10Xhap12_9476:HG2_PB_SVrefine2Falcon2Bionano_6474:HG2_PB_SVrefine2Falcon1plusDovetail_2440;NumClusterSVs=12;ExactMatchIDs=HG2_PB_assemblyticsPBcR_5336;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0279214;ClusterMaxSizeDiff=0.0279214;ClusterMaxEditDist=0.188699;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=2858;DistBack=7534;DistForward=16979;DistMin=7534;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:38824360-38824343;PctSeqSimilarity=0.9941;PctSizeSimilarity=0.9882;PctRecOverlap=0.9934;SizeDiff=-34;StartDistance=1;EndDistance=16;GTMatch=0;TruScore=99;MatchId=1154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/0:./.:26:79:0|1:26:7:0:27:./.:40:0:5:4:./.:31:3:0/1:113:411:.:2917:.
chr12	39378237	HG2_PB_SVrefine2PBcRplusDovetail_2312	T	TAAGAATTTAAATGTTTGCCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2442:HG3_PB_pbsv_12802:HG4_PB_pbsv_13130:HG2_PB_PB10Xdip_7422:HG2_PB_HySA_23851:HG2_PB_SVrefine2PB10Xhap12_9478:HG2_Ill_MetaSV_1011:HG2_PB_pbsv_13129:HG2_PB_HySA_23850:HG3_Ill_MetaSV_1104:HG4_Ill_MetaSV_1072:HG2_PB_SVrefine2PBcRplusDovetail_2312:HG2_PB_SVrefine2Falcon2Bionano_6476;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6476:HG2_PB_SVrefine2PBcRplusDovetail_2312:HG4_Ill_MetaSV_1072;NumExactMatchSVs=3;ClusterMaxShiftDist=0.109272;ClusterMaxSizeDiff=0.10596;ClusterMaxEditDist=0.179739;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=304;DistBack=41582;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=12:39378238-39378255;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:40:0|1:20:1:0:34:1|0:0:16:24:0:0/1:22:10:0/1:6:22:.:.:.
chr12	39810517	HG2_PB_pbsv_13133	G	GATACTATATATGTACATAATATGTGTGGTATATATATGTACATATAATTATGCTGTGTATATTATATGTACAATATATGTGTGTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9483:HG2_PB_pbsv_13133:HG3_PB_HySA_19759:HG2_PB_HySA_23857:HG3_PB_pbsv_12806;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_13133;NumExactMatchSVs=1;ClusterMaxShiftDist=0.105882;ClusterMaxSizeDiff=0.0941176;ClusterMaxEditDist=0.308571;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=85;DistBack=82;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=295;REFWIDENED=12:39810408-39810702;PctSeqSimilarity=0.9467;PctSizeSimilarity=0.9647;PctRecOverlap=0.9765;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=1156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:39:./.:13:11:4:8:./.:23:3:34:3:0/0:46:2:./.:.:.:.:.:.
chr12	40540030	HG4_PB_SVrefine2Falcon1Dovetail_7993	C	CATATATATATATATAAATATATATAAATATATATAAATATATATAAATATATATAAAATATATATAAATATATATAATATATATAAATATATATATAAATATATATAAAATATATATAAATATATATATAAATATATATAATATATATAAAATATATATAAATATATAAAATATATAAAAAATATATATATAAATATATATAAATATATAAATATATATATAAATATACATAAAATATATATAAATGTATATATAAAATATATATATATAAATGTAATATAAATATATATAATTGTATATATAAATATATATAAATTATATATAAATATATGTAAAAATATATATAAAAATATATATAAATATATATATAAATATATATATATAAATATATAAAATATAATATAAATATATATATTAAATATATATAATATATATATAAATGTATATATAAATATATATAAATATATATAAATGTATATATAATATATATAAATATATATAAATATATATAAATATATATAAATATATATAAATATATATATAAATATATATAAATATATAAATATATATATAAATATATATGAATATATATAATATATATATAATATATTATAAATATAAATAAATATATAAATCTATGTAAATATGTATAAATATATATAAATATATATGTAAATATATATATAAATATATAAATATATATATCAATATATATAAATATATATAAATATATATATCAATATATATAAATATATATAAAGATATATAAAGATATGTATAAATATATTAAAGATATATAAAGATATGTATAAATATATAAAGATATATAAAGATATATATATATAATATATATCTAACATATATAATATATATAAACATATATAAATATATATAAATAATATATATAATATATATAAATATATATATAAATATATATAAATATATAAATATATATATAAAATATATAAATATATATAAATATAAAATATATATAAAATATATAATAATATATAAATATATAAATATATATAAATATACATAAATATATATATCAATATACATAAATATACATAAATATATATATAAATATACATAAATATATATAAATATATATAAATATACATAAATATATAAAAATATATATAAATATATTATAAATATATATAAATATATATAAATAATATAAATATACATGAATATATATAAATATATATATAAATATATATAAAAATATAAATAAATATATAACTATATATGGAAATATATAAATATATATAAATATATATAAATAGATATAAAATATGTATAAATATATATAAATATATATATAAATATATATAATATATATAAATATATATATAAATATATATAAATATATATAAACATATATAAATATATATAAATATACATAAATATACATATAAATATATATAAATATACATAAATATACATAAAAATATATATAAATATATATAAATATACATAAATATATATATAAATATATATAATATATATATAAAAATATATAAATATATATAAATATATATACATATAGATGAATATATATATAAATATAGATAAATATATATATAAATATACATAAATATATATAAATATAGATAAATATATATATAAATATAAATATATATAAATATATAGATAAATATATATAAAATATAGATAAAATATATATAATATATAGATAAATATATATAAATATATATAAATATATAGATAAATATATATAAATATATATAAATATATAGATAAATATATATAAATATATATAAATATATAGATAAATATATATAAATATATATAAATATATAGATAAATATATATAAATATATAATATATAAATATATAAAATATATATAAATATATATATAAATATATAAATATATATAAATATATATAAATATACATAAATATACATAAATATACATAAAATATATATAAATATACATAAAATATACATAAATATATATAAATTATATAAATATATACATAAATATATACATAATATATACAAATATATACATAAATATATATATAAATATATATAAATATATAAATATATATATAAATATATATATAAATATATATAAATATATAATAAATATATATAAATTATATAAATATATATATATAATATATAAATATATAAATATATATATAAATATATATATAAATATATATAAATATATATAAATATATATTAAATATATATATAAATATATATATATAAAATATATATTAAATATATATAAATATATATAAATATATATATAAATATATATATAAATATATATAAAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7993:HG2_PB_pbsv_13140:HG2_PB_pbsv_13139:HG4_PB_pbsv_13139:HG2_PB_PB10Xdip_7434:HG2_PB_SVrefine2Falcon1plusDovetail_2447:HG3_PB_SVrefine2Falcon1Dovetail_7925:HG4_PB_SVrefine2PBcRDovetail_6580:HG2_PB_SVrefine2Falcon2Bionano_6480:HG2_PB_SVrefine2PB10Xhap12_9488:HG2_PB_SVrefine2PBcRplusDovetail_2318;NumClusterSVs=11;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_7993;NumExactMatchSVs=1;ClusterMaxShiftDist=0.192376;ClusterMaxSizeDiff=0.192376;ClusterMaxEditDist=0.248944;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=2316;DistBack=2875;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=364;REFWIDENED=12:40540031-40540394;PctSeqSimilarity=0.9659;PctSizeSimilarity=0.9496;PctRecOverlap=0.843;SizeDiff=-123;StartDistance=-322;EndDistance=-322;GTMatch=0;TruScore=91;MatchId=1157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:53:./.:5:31:0:1:./.:6:2:2:0:./.:1:0:./.:19:171:.:2405:.
chr12	40898625	HG2_Ill_SVrefine2DISCOVARplusDovetail_2701	A	ATTTATTGAAATAATAAATAAGTATACAGCCTGTGTCTATTTATTTGCTTAATACTCATTTCCCACTTCATGGTAATGAGGTAATGACCCACCACTGCCCCATCCCTTTCTTAATAGCTAGCAGTGGGGCATTCTCTGGGAAGACTCTGGAACCTGGGATTGACAACACAGGCAAGTCAAAAAGCACACAGAGAATGCTACACCATGGCTGCTCAGATGGCAGTCTCCTAGGGCAACATAACCCTGTACTCCCCATACTGCAGACTTCATGCTTGCTTTCTTTTCTCTCAGAGGCCACAAGTTCCACAGGAAGGATCAGGGCGACCGGATCAGAAGCTCCAGGAGGTAAGGTTCACCAGTCCCAGACCTCAGGGTTCTCCTCATTTCCCTGTTATGCTGAGGTGAACACATAAGTGAGAATGGGGGCAAAGGAAAGGGGGTTACTTCTTGCCTGGAAGCACAACATGTATTCTGACCATCCTGAGTAGTCCTGCTAAGGAATTTCTGCCACTTGGCCATCTAAGTTAGGCATTGCTCCATGGCCTGTGTGACAGTGTTAGTTCTCTGGACACCTGGCTGAGGCCCACTGACCTGCAGGAGCTTCCCCAGAACCCTGATTCTCCCCACTCAGGTCATCATGATTCCACAAAGCACTATCACCTGTTGCCATCTCTCTAACATGTTTATTACACTTCTTGCATATTTTCTATTTCCTCTCTCACAAACACAAATCTCACAAGGCAGTTACTTTGTTCTTTTCACTGAGAGGATTATGTCAGGCACAGAGGAAATGCTTACAAAATATAACATGAGTGACAGTCATATTCTTATGTAGAGTGTCACTGTTTACTTCACAGTTTCACTTGGTGTCAGCAGCAGTTTATTGGGTCTGAAGACGGTCAAGGAGGCTACTTAAAACACCATGGAAATGTAAAAATATCGACATGAGTGTATTCTTAAATACCTGATTATCACACTACCACCAATTACAAAAATAAGAACATTGGAAATATAAAAATGTTTCCTCCTTTTTCCCTCTGGAATGGCAGGGAGCCACATCACTGAAACTGAAATCAGTAAAGTGAAATTAAGCTTCCTTCTTTTTTTTTTTTTTTTTTTGCTAGGGTACAATGGAAGGAATAGTCAGTATGAGAACATTAAACAATAAGTTCACAAAAAATTACGGTGTACACTTTTTCTAAAACAGAAGTTGTCAAGAAAATTCTTCCAATGGTTCAGGACCACAGTGCTGAATCCAGTACTGCTTGCTCTGTTAGCTCTTTATATTCTCGTTTTAGGTACCTCCGGTAAATTCTCTGGGACAACCATTTCATCTGGAGGTTCCCACACAGGTAGTTCAATGAGAAGGAAATTTCCATTTTGCATGAATGATAACTTTGTAGAGCCGCAATCATAAAATAGCGCCTCAATATTTTTTACTCATATCTCAAATTCCCCAGACCTCATGATTTTCCTCTTTCTTTCCTCAGAGGCCACAACTCTCGCAGGTGGCAGGGACAGCACTGAAAGTGAATTCAGAACAGGTGAGGAAGAGCAGCCCATAATTTGGGAGTTACCATAAATCATGTCTCTCATTAGGAAGACTTGCTTAGAAGTAGGATTTCCTACAGAATATTAAATATGGATTTACAGACAATGTAACTGCGGTCAAATATATTTTTTCACTTAATATTTCCCTATAAATATCCTAAAATCCTCTTTTGAAATGGGTTGACTCTTCTAGATGAGGTGTAAATGGGATGTAATTGTTTTGAGAAATTTCCATATAATATTATATATAAATATTTCCAGTGTAATAGTAGAAGTTAAAAAGTTTTGATCCCAGGAAGTACAGATAACACAAATGAACTTTAAAAACATGCCTGCATAGATATTTCCTTGGCCCCAAAGCAAGAGAAATAATTATAGTATTAGGTCAACGGGGCAATGATTTTGCCCCGTTGACCTAATGTGGAGCAATTAGGAGTAATTAGTTCTGGTGTTTTGTAGCAATGAGGTGCCTATGGTAAACAATGTTATGGTGTACATTCAAATGTTCTTGATAAGAAGATTCTGAATGTTCTACCCACAAAGCAATGATAAGTGAGATGATGGATAAGCTAAATATCATGACTTGATTATTACAAAATATATACATATATCAAAACCTCCCATATAACCTCCAGAAATATGTATACTTATATGAAAATTAAAAAGAAAAGTAAAAATAGATCAAATTATCATGAAATAAATAATTTTTTGTCTTCTACCCCTGGCAGTGTAACTGGTAAGTATGGGAGAAAACCACCTGTTTTGCTGTCATGGAATGTCAGGTGTAATCCTGAAATTTTGCCCCTTTGACTCCATTGGTAGTTTATTAACGAATGGGAAAACACATCCGAGTGGCAGCCAGAGAAAGTGGCCTTTGACATCTTAAAGATGTAAACAGATTCCTTCTAGAGGCAGGTCTTCAGGAGACAAACAGGAGTCACTGTGGTGATGCCAGTTTCCCTTGTGTTTCAGCCACCATTGGAGTAGTTCCTGCTACAACTGTTGCTCCTGGCAGTTCCAAGACAGGTAAGTCAACAGATTGACATGGAATCTTCCACGTGCCCTCCCATAATTAGATATCTCCTTTGTATTATTTTTTGCAGGAGTAGCACCATATCTTCTCCACAATCCTTAAATATTCTCCAGGTAACTCTTATCTCTTTGTTTCCCTTAGAGGCCACCACTTTCCTAGGAGTAAGTGGAACAACAAGTGTTGGAAGAGCCACGGGTGAGTGCTGCTAGACTAAGACCTGTAATTCCTAACGACACCTTCAATAGTCTTCTGAAAATATCTATATGATTTGTATATACTATATTGAGAAAATTCATAAAAAAGACTAGACAGTCTCCTTATTTCCTGAGCTTACAAAGTCCCTCACTAAACCATCATGACATCAAACCAATGACAGATAAATAAGTAATATGGGGAGAAAATTCTTATCTTCCCCCAAAAGAGAAGGACATGATTGCTGAGAACTGTCTCAGTAAAATTGCTGTGGAAAGAAATGTTGCATGGGACAAATATGAATTTCTTCTAGCACTGTGAGTCTCAGAGTAATAGTTTGCTTCTAAGTGGGGATTTGAGATTCCTATAGAAATGAAGTGGAAATAGAGTTCAGCTAGTGTCACCATCTCTCTCTTGTTGTAGGTATTACCGTTGTAGTCTCTGGAAAAACACTGAAACCTGGAAGTTACAAGACAGGCACGTCTGAAAATACATGCAAAATCTGGACATGGGCACCTTGATTGACATACTCTGCCCACAGCGCAGTGTGTACTCTCTCAAAAACTAGTCTTCACTCCTTCCTTTCTTTTCTCTCTCTCAGGGGCCACAACTTCCATAGCAGGGAGTGACACCAGCCAAGCAGAACATCCAGGAGGTGAGCTTTTTACTCTGAGGCCTTGGTGCTTTTAGCAAATCCCTGTTCTCCGCAGTGAAGACATTGATGTGAAGGTGGGCTGAGGAAAGGGGCCTGCATTTCCTCTGGTAACACAGCATGCCGGAGTTACAAACCTGGGTGTGCATAGGAATTCCCTGGCCTCACCTGGGTTATCCCTCTGGATTTCCAGGAGCCCAGACTTGCAAAGCTAGTTATTATGTAGCAGGGATGAGGGCAAGCTGCTGGATACCCCCCACCATTCAGGGCATACAATTTGCCTTTTATACAATTTGCCTTTTTCCCAAAGTGTTTACTAACATCTTTCACACTGACTTATTTGTTACGTTTATTGTTCATTGCTGGCCTCCAGCTACTAGAATGTAAGGTGCATTAGGAGAAAGATCTTTGAACATTTCGCTCACTGATACATCCCAAGGTCCTAAAACAATATTACACAGGAGAGATGCTTAATAAATATTAGTGGAATGATGAAAGAAATTATTTTGAAGTTCTTCATTCTATTTACTCTAATAGATACAATTATAGTTTCACCTGAAGTCAGAATTCCAAGCCAGGTAGAATAGATTGAGTAAAGTCATCACATGGGAATATTAGAGTTAGAGAGTTATTTTTTAAACATGTGAATATCAAAATACCTCAAGTAATTGGTGAGAAATATTTATAAAAATAGAAGGTAGTCTGCTTTTTTCTTCTTAACACATCATTGTCACATCAGGGGGCCCAGCTTTTGGAAGTTCAACAGGTGAGGGGGAGATAAGGTCTCCTTTCGCATTCACTGGGATCTATGGAAAGGGGAACCCCAGAAGCAACAATGTTCAGTTGAGGGGCAAAGAAACAAAGGGGTAGTCATTCATGGTTCATTTCCTTCTGAAACATACGTTCTTAGGAAAGGCCTCTAGTGGTTCAGGATCATATCACTTCTTTTACCATTCTTTGCTCTATTAGCACCTTTACTCTTCTCATTTTAGGTACTTCTGGTGAATTCCCAGGAACAACCATTACATCTGGAGATTCCCACACAGGTAGTTCAATAAGAAGGAAATCCTCATGTTGAATGTACGGTAACTTTTTAGAGCTGCAGTCATAAAATAGCTTTTTCCTTGTATCTTCAATTCCTTACACCCCTTGATTTTCTTTTTCCCACAGAGGCCACAGCTCTAACAGGAAGCAGGGGCAGTATTGGAACTGAATCCACAGTAGGTGAGGAGCAGGCCATGATTTGGGAGTTATGTGAATTATGACTTTTATTATTATGACTTGTTTAGAAGTGAAATTTCCTACAGAACATTGTGCATTTTTTTTAGGGAAAATGAATCTAAGCCCAAATAATTTTTTTTTTTACATTTAATGTTTTCTTTTTTTAAAAAAAAAACACAAATTACCAATAGTGTCTTTTGAATGTGATGCCTCTTGAATTTGTTTTGAGAAATTTCTCCTATAACGTTATAAACATTGCCAGGGTTTTAGTATGAGCTGAAAAGTTTTGCTCTTGGGAAGTAGAGACAAGGTAAATGAACCTTGAAATCATGCCTAATAAAGGTTTCTATGCCCCAAAAGCAATGCAAATAATTATTATTTTATGAATATCTGAAATTCTCATTAAACTTAATTTTTCTAAAGTAAAACCAATGAATATGGGAGGAAACCACCTGTCTTCCTCTAATGGAATTCCAAGAATGCCACATGTTGAGAAATTGATCACCCTTACTATTTTGATAATAAAATTGTTAATGAGAAAATACATCTGGCCTATCATCAGGGAAGAACCAGAAAAAGAGTTATTTGGATATAATGATGATTTGCTTAGATTCTTTCTAGAGCCAGATCTTTGGGAAAAAAAAAAAGAAAACATAAGCACCATAATGACCACAGTCCTCTTGATGTTTCATCCACCACCGGGATAACTCCTGGCACAATTCTTGCCCCTGGCAGTTCCAATACAAGTGAATCTACAGGTTGTCAGGAAACTCTTCAAGGATCTTTACATAATTAGATGCCTCATTTGGTGCAATTCTATCCATGAATACTATCATATCTGTTTCATGGCCCTTCAATATTTTCCAAGTATGTCCTCTCTGTTTTTCTCTCTCTCAGAGACCACAACATACATTGGAGAAAGTGGGACCACAAGAGGTGGATTAGCCACGGGTGAGCATTGCATTCACCTGCCAATAATAACCCCAAAGGATTACAGACTGAAATGTATCCATGCTAATCATTTTTCCAATACTGAGTATTATTAGAGATAATCTTACCATTATTCATTGACTGAGGTTTCAGATTCTCAAATTTTGTTCTTATTTCCTATGCTTTCAACAGCTGTCCTCATAACCCCCAAGGCAATCATGCAGCCATTCCACTGACACTAATTTAGATGTTGTAGAGAGTTAGCTTCTATCTCCCTAGTCCTGAACGCTAGAAGAAAGAAAGCCCAATAAGTAAAAAATTACTTGGTAAATATTCTGTCACATGTATATCGTATGAAGAATATGCAGATTACTATTAGGCATAAAAAGTCCAGTTTACAGCTGGGCATGGTGACTCATGCCTGTAATCCCAGAACTTTGAGAGTCCAAGGCGTGAGGATCACTTAAGCCAAGGAGATTGAGACCAGCCTGGGCGATATGGTGCAACCCTGTCTCTACAAATAATAATAACAATAATAATAATAATAATACAAAAATTAGCTGGGCATGGTGGCATGTGCTTGTAGTCCCAGCTACTCGGAAGGCTAAGGCTGGAGGATGGCTTGAGCCCAGGAGGTGGAGGTTGCAGTGAACTAAGATTGTGCCACTATGCTCCAGCCTGGGTAAGAGTGAGACTGTCTGAAAAAAAAAAAAATCACAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7931:HG2_Ill_SVrefine2DISCOVARplusDovetail_2702:HG2_PB_HySA_23881:HG3_PB_HySA_19784:HG4_PB_HySA_19125:HG2_PB_PB10Xdip_7445:HG3_PB_SVrefine2PBcRDovetail_6179:HG3_Ill_SVrefine2DISCOVARDovetail_9475:HG4_Ill_SVrefine2DISCOVARDovetail_9350:HG4_PB_SVrefine2Falcon1Dovetail_7998:HG2_PB_SVrefine2PBcRplusDovetail_2323:HG2_PB_SVrefine2Falcon2Bionano_6485:HG2_Ill_SVrefine2DISCOVARplusDovetail_2701:HG2_PB_SVrefine2PB10Xhap12_9493:HG4_PB_SVrefine2PBcRDovetail_6583:HG2_PB_SVrefine2Falcon1plusDovetail_2452;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2701:HG2_PB_SVrefine2Falcon2Bionano_6485;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0156596;ClusterMaxSizeDiff=0.0155014;ClusterMaxEditDist=0.0268902;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=6298;DistBack=11591;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=12:40907161-40899350;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9997;PctRecOverlap=0.9316;SizeDiff=2;StartDistance=-430;EndDistance=-430;GTMatch=0;TruScore=97;MatchId=1158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:0:23:2:39:./.:0:3:0:5:1/1:0:20:1/1:5:615:.:6865:.
chr12	41847708	HG3_Ill_MetaSV_1113	T	TAAAATTTAATCTCCTGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCGCCTGGGCCGCAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4376:HG2_PB_pbsv_13152:HG3_PB_pbsv_12824:HG2_PB_assemblyticsPBcR_5378:HG2_PB_assemblyticsfalcon_5562:HG3_PB_HySA_19800:HG4_PB_HySA_19140:HG4_PB_SVrefine2PBcRDovetail_6586:HG3_PB_SVrefine2PBcRDovetail_6185:HG4_Ill_SVrefine2DISCOVARDovetail_9354:HG4_Ill_GATKHCSBGrefine_9065:HG3_PB_SVrefine2Falcon1Dovetail_7936:HG2_PB_SVrefine2PBcRplusDovetail_2328:HG2_PB_SVrefine2PB10Xhap12_9498:HG2_PB_SVrefine2Falcon2Bionano_6490:HG3_Ill_SVrefine2DISCOVARDovetail_9483:HG3_Ill_MetaSV_1113:HG3_Ill_GATKHCSBGrefine_8675:HG2_PB_SVrefine2Falcon1plusDovetail_2457:HG2_Ill_manta_3647:HG2_Ill_SVrefine2DISCOVARplusDovetail_2707:HG2_Ill_MetaSV_1019:HG2_Ill_GATKHCSBGrefine_8798:HG2_10X_SVrefine210Xhap12_9183:HG4_PB_SVrefine2Falcon1Dovetail_8003:HG4_Ill_manta_3093:HG4_Ill_MetaSV_1084:HG2_PB_PB10Xdip_7452:HG2_PB_PB10Xdip_7453:HG2_PB_HySA_23897:HG4_PB_pbsv_13156;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9183:HG2_Ill_GATKHCSBGrefine_8798:HG2_Ill_MetaSV_1019:HG2_Ill_SVrefine2DISCOVARplusDovetail_2707:HG2_Ill_manta_3647:HG2_PB_SVrefine2Falcon1plusDovetail_2457:HG3_Ill_GATKHCSBGrefine_8675:HG3_Ill_MetaSV_1113:HG3_Ill_SVrefine2DISCOVARDovetail_9483;NumExactMatchSVs=9;ClusterMaxShiftDist=0.184049;ClusterMaxSizeDiff=0.184049;ClusterMaxEditDist=0.245322;PBcalls=18;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=242;DistBack=7638;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:41847709-41847723;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1159.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:18:0:27:./.:0:11:0:0:1/1:0:35:./.:.:.:.:.:.
chr12	42432014	HG2_PB_pbsv_13154	G	GGGCGGGTCCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGCGGATCAGCGAGGTCAGAGAATCGAGACTCATCCGGTAAAAACGGTGACAACCCGTCTCTTACTAAACAATACAAAAAATTAAGCCGGGCGTAGTGGCGGCGCCTGTAGTCCAGCTACTTGGGGGCTGAGGCAGGAGACATCTGGCGTGCAACCCGGGAGGCGGAGCCTGCAGTGAGCGAGATCGCGCCACTGCATCCAGCTGGCGACAGACGCGGACTCCGTCTCAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_5569:HG2_PB_pbsv_13154:HG2_PB_SVrefine2Falcon1plusDovetail_2459:HG4_PB_HySA_19146:HG2_PB_SVrefine2Falcon2Bionano_6492:HG2_PB_HySA_23904;NumClusterSVs=6;ExactMatchIDs=HG2_PB_pbsv_13154;NumExactMatchSVs=1;ClusterMaxShiftDist=0.073132;ClusterMaxSizeDiff=0.073132;ClusterMaxEditDist=0.15949;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=323;DistBack=-30;DistForward=13487;DistMin=-30;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=12:42432015-42432014;PctSeqSimilarity=0.9506;PctSizeSimilarity=1;PctRecOverlap=0.969;SizeDiff=0;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=97;MatchId=1160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:22:0|1:22:0:2:18:./.:23:0:0:3:0/1:27:8:0/1:4:6:.:.:.
chr12	43256972	HG2_PB_SVrefine2PB10Xhap12_9502	T	TTTTAATTCTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATAGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAGTGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACG	20	PASS	ClusterIDs=HG3_PB_HySA_19813:HG2_PB_pbsv_13155:HG4_PB_HySA_19155:HG2_PB_assemblyticsfalcon_5576:HG2_PB_assemblyticsPBcR_5392:HG2_PB_HySA_23912:HG3_PB_pbsv_12829:HG4_PB_pbsv_13160:HG3_PB_HySA_19814:HG2_PB_HySA_23911:HG2_Ill_MetaSV_1021:HG4_Ill_MetaSV_1087:HG4_PB_HySA_19154:HG4_PB_SVrefine2Falcon1Dovetail_8006:HG2_PB_SVrefine2Falcon1plusDovetail_2460:HG2_10X_SVrefine210Xhap12_9186:HG4_PB_SVrefine2PBcRDovetail_6589:HG3_PB_SVrefine2PBcRDovetail_6191:HG3_PB_SVrefine2Falcon1Dovetail_7942:HG2_PB_SVrefine2PBcRplusDovetail_2331:HG2_PB_SVrefine2PB10Xhap12_9502:HG2_PB_SVrefine2Falcon2Bionano_6493:HG2_PB_PB10Xdip_7457:HG2_PB_PB10Xdip_7456;NumClusterSVs=24;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6493:HG2_PB_SVrefine2PB10Xhap12_9502:HG2_PB_SVrefine2PBcRplusDovetail_2331;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0573876;ClusterMaxSizeDiff=0.0573876;ClusterMaxEditDist=0.164116;PBcalls=21;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=1159;DistBack=17532;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=12:43256973-43256985;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9983;PctRecOverlap=0.9983;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:85:./.:9:26:1:42:1/1:0:7:0:9:1/1:0:20:1/1:18:377:.:1094:.
chr12	44139555	HG4_Ill_GATKHCSBGrefine_9069	T	TAAAAAAAATCTCTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_19158:HG4_PB_pbsv_13164:HG4_PB_SVrefine2Falcon1Dovetail_8009:HG2_PB_pbsv_13158:HG4_Ill_MetaSV_1089:HG4_Ill_GATKHCSBGrefine_9069:HG2_Ill_MetaSV_1023:HG2_Ill_GATKHCSBGrefine_8802:HG3_PB_SVrefine2Falcon1Dovetail_7945:HG4_PB_SVrefine2PBcRDovetail_6592;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8802:HG2_Ill_MetaSV_1023:HG4_Ill_GATKHCSBGrefine_9069:HG4_Ill_MetaSV_1089;NumExactMatchSVs=4;ClusterMaxShiftDist=0.201626;ClusterMaxSizeDiff=0.197731;ClusterMaxEditDist=0.260163;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=322;DistBack=26915;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=12:44139556-44139571;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:27:0|1:35:2:0:21:0|1:19:0:0:6:0/1:33:15:0/1:13:57:.:.:.
chr12	44420989	HG2_Ill_GATKHC_21027	T	TTTATTTTATTTTAGTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTATTTTATTTTATTTTATTTTATTTTATTTTATATTTTATTTTATTTTTTATTTTATTTTATTTTATTTTTTATTTTATTTTATTTTATTTTATTTTATTTTTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_9366:HG2_Ill_scalpel_12392:HG2_PB_HySA_23922:HG4_Ill_GATKHC_21021:HG4_Ill_GATKHCSBGrefine_9070:HG2_Ill_GATKHC_21027:HG2_Ill_GATKHCSBGrefine_8803:HG4_PB_HySA_19159:HG4_PB_pbsv_13165:HG2_PB_pbsv_13159:HG2_PB_SVrefine2Falcon2Bionano_6495;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8803:HG2_Ill_GATKHC_21027:HG4_Ill_GATKHCSBGrefine_9070:HG4_Ill_GATKHC_21021;NumExactMatchSVs=4;ClusterMaxShiftDist=0.157518;ClusterMaxSizeDiff=0.157518;ClusterMaxEditDist=0.279412;PBcalls=5;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=217;DistBack=21;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=117;REFWIDENED=12:44420886-44421002;PctSeqSimilarity=0.9887;PctSizeSimilarity=0.9775;PctRecOverlap=0.9731;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:18:0|1:40:1:0:16:./.:14:2:0:11:0/1:15:14:./.:.:.:.:.:.
chr12	44487570	HG2_PB_SVrefine2Falcon2Bionano_6496	T	TGAGAAAATTGATCTTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8010:HG2_PB_pbsv_13160:HG4_PB_pbsv_13166:HG2_PB_SVrefine2PB10Xhap12_9505:HG2_PB_assemblyticsfalcon_5581:HG2_PB_assemblyticsPBcR_5396:HG2_Ill_breakscan11_4377:HG2_PB_HySA_23923:HG4_PB_HySA_19160:HG4_Ill_MetaSV_1090:HG4_Ill_GATKHCSBGrefine_9071:HG2_PB_SVrefine2Falcon2Bionano_6496:HG2_PB_SVrefine2Falcon1plusDovetail_2463:HG2_Ill_MetaSV_1024:HG2_Ill_GATKHCSBGrefine_8804:HG2_PB_SVrefine2PBcRplusDovetail_2333;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8804:HG2_Ill_MetaSV_1024:HG2_PB_SVrefine2Falcon1plusDovetail_2463:HG2_PB_SVrefine2Falcon2Bionano_6496:HG4_Ill_GATKHCSBGrefine_9071:HG4_Ill_MetaSV_1090;NumExactMatchSVs=6;ClusterMaxShiftDist=0.259635;ClusterMaxSizeDiff=0.259635;ClusterMaxEditDist=0.283976;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=253;DistBack=5;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=12:44487571-44487589;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:51:0|1:28:3:1:45:0|1:24:0:0:9:0/1:33:6:./.:.:.:.:.:.
chr12	45419544	HG3_Ill_GATKHCSBGrefine_8679	T	TAGAAAGATCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCATAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4378:HG4_PB_pbsv_13167:HG2_PB_assemblyticsfalcon_5587:HG3_PB_pbsv_12836:HG3_PB_HySA_19826:HG3_PB_SVrefine2Falcon1Dovetail_7946:HG4_PB_SVrefine2Falcon1Dovetail_8011:HG4_Ill_manta_3095:HG3_Ill_MetaSV_1117:HG3_Ill_GATKHCSBGrefine_8679:HG2_PB_SVrefine2Falcon1plusDovetail_2464:HG2_Ill_MetaSV_1025:HG4_PB_SVrefine2PBcRDovetail_6593:HG4_Ill_GATKHCSBGrefine_9072:HG4_Ill_MetaSV_1091:HG4_PB_HySA_19166:HG2_PB_pbsv_13162;NumClusterSVs=17;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_8679:HG3_Ill_MetaSV_1117;NumExactMatchSVs=2;ClusterMaxShiftDist=0.106452;ClusterMaxSizeDiff=0.106452;ClusterMaxEditDist=0.202212;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=310;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=12:45419545-45419555;PctSeqSimilarity=0.9904;PctSizeSimilarity=0.9904;PctRecOverlap=0.9936;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:26:0|1:49:4:1:27:0|1:29:0:0:12:0/1:20:9:0/1:7:15:.:.:.
chr12	46175155	HG2_10X_SVrefine210Xhap12_9194	T	TTGGCCAGGCACGGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCTGAGGTGGGCGGATCATGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAACCTCATCTCTACTAAAAATACAAAAAAAAAAAAATTAGCCGGGCATGGTGGAGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCAGAGATTGTGCCACTGCACTCCAGCCTGGGCGACAGAGCTAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAATGAGGGCATTAGTTTCTTGCTAGCTGTTGGCTGGAGGGCCTCCCTCAGTTTTTTGCGTCTCCATGGGGCAGCTCACTGTAGGACAACTGTTTTTCTTCAGAATAAGCAAGTGGGAGAGAAAAAGAACAAGATGGAAGTTGAGTCTTTATGTAACCTAATCTCAGAAGTGACATCTTACCACTTCTGTTGTCTTCTGATCTTAAAACAAGTCAGTAGGTTTATCCTCTACTCAAGGGGAAAGAATTATGCAGTGACATGAATAGCAGGAGTCAGGAATCATTGGGAGCCTTCTTAGAAGCTGCCTGCCTGAAGAGCAAAGCAAAACATCTGCATAAAACTAAATTTATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGAGCCCGCCACCACTCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTGGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_13165:HG4_PB_pbsv_13168:HG2_PB_assemblyticsPBcR_5405:HG2_PB_assemblyticsfalcon_5594:HG3_PB_HySA_19829:HG2_PB_PB10Xdip_7465:HG2_PB_PB10Xdip_7464:HG4_Ill_MetaSV_1092:HG4_Ill_SVrefine2DISCOVARDovetail_9373:HG2_10X_SVrefine210Xhap12_9194:HG4_PB_SVrefine2PBcRDovetail_6594:HG3_PB_SVrefine2PBcRDovetail_6197:HG2_Ill_SVrefine2DISCOVARplusDovetail_2722:HG2_PB_SVrefine2PBcRplusDovetail_2334:HG2_PB_SVrefine2PB10Xhap12_9506:HG2_PB_SVrefine2Falcon2Bionano_6497:HG3_PB_SVrefine2Falcon1Dovetail_7948:HG4_PB_SVrefine2Falcon1Dovetail_8013:HG2_PB_SVrefine2Falcon1plusDovetail_2465:HG4_PB_HySA_19173:HG2_PB_HySA_23935:HG2_Ill_breakscan11_4379;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9194:HG4_Ill_SVrefine2DISCOVARDovetail_9373;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0714976;ClusterMaxSizeDiff=0.0714976;ClusterMaxEditDist=0.170916;PBcalls=17;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=1021;DistBack=23013;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=12:46175156-46175166;PctSeqSimilarity=0.998;PctSizeSimilarity=0.998;PctRecOverlap=0.998;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:22:0:18:1/1:0:14:0:12:1/1:0:33:0/1:25:161:.:.:.
chr12	46471056	HG2_Ill_Krunchall_17904	A	ATATATGAATATACATGTACATGTGTATACATATATGTGTATATATATATGAATATACATGTACATGTGTATACATATATG	20	PASS	ClusterIDs=HG2_PB_pbsv_13166:HG2_PB_HySA_23936:HG3_PB_pbsv_12841:HG3_Ill_svaba_16503:HG3_Ill_manta_2979:HG3_Ill_Krunchall_17558:HG3_Ill_GATKHC_20904:HG3_Ill_GATKHCSBGrefine_8681:HG3_Ill_250bpfermikitraw_17065:HG2_Ill_svaba_16370:HG2_Ill_manta_3650:HG2_Ill_Krunchall_17904:HG2_Ill_GATKHC_21040:HG2_Ill_GATKHCSBGrefine_8806:HG2_Ill_250bpfermikitraw_17567:HG3_Ill_SVrefine2DISCOVARDovetail_9498:HG2_PB_SVrefine2Falcon2Bionano_6498:HG2_Ill_SVrefine2DISCOVARplusDovetail_2724;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17567:HG2_Ill_GATKHCSBGrefine_8806:HG2_Ill_GATKHC_21040:HG2_Ill_Krunchall_17904:HG2_Ill_manta_3650:HG2_Ill_svaba_16370:HG3_Ill_250bpfermikitraw_17065:HG3_Ill_GATKHCSBGrefine_8681:HG3_Ill_GATKHC_20904:HG3_Ill_Krunchall_17558:HG3_Ill_manta_2979:HG3_Ill_svaba_16503;NumExactMatchSVs=12;ClusterMaxShiftDist=0.121212;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.294118;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=80;DistBack=-1;DistForward=11718;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=70;REFWIDENED=12:46471051-46471120;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:0|1:31:2:1:24:./.:1:44:19:1:0/1:19:26:./.:.:.:.:.:.
chr12	48153648	HG4_PB_SVrefine2PBcRDovetail_6598	C	CAGACTGGGAAGAAGTATCTCTAAAAAGCCTATACCCCAATTTTGGGATGCCAAGCCCGCATCCTCCACCATGATTATTTTCTTGAAAGTGAGGAGA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2731:HG2_PB_pbsv_13175:HG4_PB_HySA_19189:HG2_10X_SVrefine210Xhap12_9202:HG4_Ill_GATKHCSBGrefine_9080:HG4_PB_pbsv_13176:HG4_Ill_250bpfermikitraw_17416:HG2_Ill_250bpfermikitraw_17584:HG4_PB_SVrefine2PBcRDovetail_6598:HG4_Ill_SVrefine2DISCOVARDovetail_9378;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2731:HG4_PB_SVrefine2PBcRDovetail_6598:HG4_Ill_SVrefine2DISCOVARDovetail_9378;NumExactMatchSVs=3;ClusterMaxShiftDist=0.107317;ClusterMaxSizeDiff=0.107317;ClusterMaxEditDist=0.278846;PBcalls=4;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=96;DistBack=65121;DistForward=100028;DistMin=65121;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=194;REFWIDENED=12:48153649-48153842;PctSeqSimilarity=0.9839;PctSizeSimilarity=0.9897;PctRecOverlap=0.4021;SizeDiff=-1;StartDistance=-58;EndDistance=-58;GTMatch=0;TruScore=79;MatchId=1168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:26:0|1:26:4:2:21:./.:3:0:5:2:0/1:36:13:./.:.:.:.:.:.
chr12	48334643	HG2_PB_SVrefine2Falcon1plusDovetail_2472	A	ATGGATGCATTAAGTCGAAATGTCCGCGAGGCCTCCAACAGAAGTCTCCAAGGGAACTGCTTCTGGGGGTCAGAACTCAGAGGAAGAATGGGGTTTGCCACCATACAGATGGTGTCTAAACCACAGAAACACAGCAGAGGGTACGGCAGGACCAAGTCCACGTGGCACTAGCTTTCCAGTCACTTTGGTGGCTTAGAAAAACCAGGGCCATGGTGGCCATTGAGAAGAATGGTGGCAAAGCAAGTGCATTTTTTGTGGGATCTGGTGGACTGGACGATATATTGGATGTGAAAGGTAAGGCAGCACCAAGGACTGCAGTCTTCAGCAACTAGAAAGATGAAGGTGAGGCAGGCTAGATTGGGGGTGACAGGGGGGAATCAAGGGTTGTCATC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2472:HG2_PB_pbsv_13176:HG3_PB_pbsv_12852:HG3_PB_SVrefine2PBcRDovetail_6203:HG4_PB_SVrefine2Falcon1Dovetail_8019;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2472:HG4_PB_SVrefine2Falcon1Dovetail_8019;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0378788;ClusterMaxSizeDiff=0.0252525;ClusterMaxEditDist=0.175219;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=391;DistBack=21278;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=577;REFWIDENED=12:48334644-48335220;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:25:./.:12:18:27:6:./.:0:15:0:2:0/1:2:10:./.:3:5:.:.:.
chr12	48929051	HG2_PB_assemblyticsPBcR_5429	TAACATCACAC	ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACGATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACGTATGTAACTAACCTGCACAATGTGCACATGTACCTAAAACTTAGAGTATAATAAAAAAAAAAATTCTAATTAAAAACATAAAAAAAAAAAAAAAATAAAAAAAAAGAAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_23972:HG4_PB_pbsv_13183:HG2_PB_PB10Xdip_7487:HG2_PB_pbsv_13183:HG4_PB_SVrefine2Falcon1Dovetail_8025:HG3_PB_pbsv_12859:HG2_PB_HySA_23973:HG2_PB_assemblyticsPBcR_5429:HG2_PB_assemblyticsfalcon_5621:HG3_PB_HySA_19851:HG2_PB_SVrefine2PBcRplusDovetail_2343:HG4_Ill_MetaSV_1096:HG3_Ill_MetaSV_1124:HG2_PB_SVrefine2Falcon1plusDovetail_2476:HG3_PB_SVrefine2Falcon1Dovetail_7959:HG2_PB_SVrefine2PB10Xhap12_9517;NumClusterSVs=16;ExactMatchIDs=HG2_PB_assemblyticsPBcR_5429;NumExactMatchSVs=1;ClusterMaxShiftDist=0.21232;ClusterMaxSizeDiff=0.21232;ClusterMaxEditDist=0.278388;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=693;DistBack=10237;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:48929062-48929050;PctSeqSimilarity=0.9867;PctSizeSimilarity=0.9598;PctRecOverlap=0.9723;SizeDiff=-29;StartDistance=0;EndDistance=10;GTMatch=0;TruScore=97;MatchId=1170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:30:1|0:0:31:18:0:./.:30:0:3:5:0/1:31:8:0/1:21:84:.:.:.
chr12	49760329	HG3_Ill_250bpfermikitraw_17093	A	AGGAACTGACTTGGGGAGCGTGCCGGGCGGACATCGCCAGGGCAGAGAACCCCCATCAGC	20	PASS	ClusterIDs=HG2_PB_pbsv_13186:HG3_PB_HySA_19855:HG2_PB_HySA_23975:HG2_PB_PB10Xdip_7495:HG2_PB_PB10Xdip_7494:HG2_Ill_breakscan11_4380:HG3_Ill_svaba_16531:HG3_Ill_manta_2983:HG3_Ill_Spiral_13708:HG3_Ill_Krunchall_17585:HG3_Ill_GATKHC_20937:HG3_Ill_GATKHCSBGrefine_8696:HG3_Ill_Cortex_795:HG3_Ill_250bpfermikitraw_17093:HG2_PB_assemblyticsPBcR_5433:HG2_Ill_svaba_16390:HG2_Ill_manta_3656:HG2_Ill_SpiralSDKrefine_3518:HG2_Ill_Krunchall_17933:HG2_Ill_GATKHC_21067:HG2_Ill_GATKHCSBGrefine_8819:HG2_Ill_Cortex_1836:HG2_Ill_250bpfermikitraw_17594:HG2_Ill_150bpfermikitraw_16563:HG2_PB_assemblyticsfalcon_5625:HG3_PB_pbsv_12863;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16563:HG2_Ill_250bpfermikitraw_17594:HG2_Ill_Cortex_1836:HG2_Ill_GATKHCSBGrefine_8819:HG2_Ill_GATKHC_21067:HG2_Ill_Krunchall_17933:HG2_Ill_SpiralSDKrefine_3518:HG2_Ill_manta_3656:HG2_Ill_svaba_16390:HG2_PB_assemblyticsPBcR_5433:HG3_Ill_250bpfermikitraw_17093:HG3_Ill_Cortex_795:HG3_Ill_GATKHCSBGrefine_8696:HG3_Ill_GATKHC_20937:HG3_Ill_Krunchall_17585:HG3_Ill_Spiral_13708:HG3_Ill_manta_2983:HG3_Ill_svaba_16531;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0826446;ClusterMaxSizeDiff=0.0826446;ClusterMaxEditDist=0.17094;PBcalls=8;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=59;DistBack=0;DistForward=59806;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=12:49760328-49760330;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:26:0|1:14:3:0:21:0|1:10:0:0:21:0/1:35:27:./.:.:.:.:.:.
chr12	50005442	HG3_Ill_SVrefine2DISCOVARDovetail_9512	G	GACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGATGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGGGAGACTCTGTCTCAAGAAAAAAAAATGTAGAGACGGGATTTCACCACATTGCCCAGGCTGTTCTCATACTCCTGGGCTCAAGTAATCCACCCGTCTCAGCCTTCTAAAGTCTGGGATTATAGGCGTGAGCCATGGTACCCAGCCCTCAACTTTTTTTTTTTTTTTTGAGACAGTCTTGATCTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCCACCTCCCAGATTCAAGCAATTCTCCTGCCTCAGTCTCCCAAGTAGCTAGAACTACAGGCACCTGCCCCCACGCCAAGCTAATTTTTGTATTTTTTGTAGAGATGGGCTTTCACCATGTTGGCCAGGCTCATCTTGGACTCCTGACCTCAAAAGACCCACCCACCTTGGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCCGGCCCATCTGCATTCTTAAAAGAAAAGTAATTCCAACCAAGAATTTCATATCCTGCCAAACTAAACTTCATAATTGGGCCAGGTATGGTAGCTCACACCTGTAATCCCAGCACTTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8027:HG3_PB_pbsv_12864:HG2_PB_PB10Xdip_7497:HG4_PB_pbsv_13185:HG2_PB_PB10Xdip_7496:HG4_PB_HySA_19204:HG3_Ill_MetaSV_1127:HG4_Ill_MetaSV_1097:HG3_Ill_manta_2984:HG3_Ill_GATKHCSBGrefine_8697:HG2_Ill_MetaSV_1031:HG4_Ill_GATKHCSBGrefine_9087:HG2_Ill_GATKHCSBGrefine_8820:HG3_PB_HySA_19856:HG2_PB_pbsv_13187:HG4_Ill_SVrefine2DISCOVARDovetail_9385:HG3_PB_SVrefine2PBcRDovetail_6209:HG3_Ill_SVrefine2DISCOVARDovetail_9512:HG2_PB_SVrefine2PB10Xhap12_9522:HG2_10X_SVrefine210Xhap12_9211:HG4_PB_SVrefine2PBcRDovetail_6604:HG3_PB_SVrefine2Falcon1Dovetail_7961:HG2_PB_SVrefine2PBcRplusDovetail_2346:HG2_PB_SVrefine2Falcon2Bionano_6510:HG2_Ill_SVrefine2DISCOVARplusDovetail_2741:HG2_PB_SVrefine2Falcon1plusDovetail_2479;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9211:HG2_PB_SVrefine2PB10Xhap12_9522:HG3_Ill_SVrefine2DISCOVARDovetail_9512:HG3_PB_SVrefine2PBcRDovetail_6209:HG4_Ill_SVrefine2DISCOVARDovetail_9385;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0602094;ClusterMaxSizeDiff=0.0549738;ClusterMaxEditDist=0.259403;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=745;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=192;REFWIDENED=12:50005443-50005634;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.9987;PctRecOverlap=0.9624;SizeDiff=1;StartDistance=-28;EndDistance=-28;GTMatch=0;TruScore=98;MatchId=1172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:24:1:26:./.:0:4:0:5:1/1:0:28:1/1:4:156:.:725:.
chr12	50292018	HG2_PB_SVrefine2PBcRplusDovetail_2349	C	CCCAGCCCGGCTCCACCCCAATCCCCAGATCTCTCTCCCTGGTCAATTCTCACTTTTCCTGCTCTGAGTCCTGGGAAGAAGCTGTCATCCCCTACCTCTCCCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9214:HG2_PB_pbsv_13191:HG3_PB_HySA_19862:HG4_PB_pbsv_13188:HG2_PB_HySA_23980:HG4_PB_HySA_19209:HG4_Ill_GATKHCSBGrefine_9089:HG4_Ill_250bpfermikitraw_17428:HG3_Ill_GATKHCSBGrefine_8699:HG3_Ill_250bpfermikitraw_17101:HG2_Ill_GATKHCSBGrefine_8822:HG2_Ill_250bpfermikitraw_17597:HG3_PB_pbsv_12869:HG2_PB_PB10Xdip_7501:HG4_PB_SVrefine2Falcon1Dovetail_8030:HG4_PB_SVrefine2PBcRDovetail_6607:HG4_Ill_SVrefine2DISCOVARDovetail_9387:HG3_PB_SVrefine2PBcRDovetail_6212:HG3_PB_SVrefine2Falcon1Dovetail_7964:HG3_Ill_SVrefine2DISCOVARDovetail_9515:HG2_PB_SVrefine2PBcRplusDovetail_2349:HG2_PB_SVrefine2PB10Xhap12_9525:HG2_PB_SVrefine2Falcon2Bionano_6513:HG2_PB_SVrefine2Falcon1plusDovetail_2482:HG2_Ill_SVrefine2DISCOVARplusDovetail_2744;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9214:HG4_PB_SVrefine2PBcRDovetail_6607:HG4_Ill_SVrefine2DISCOVARDovetail_9387:HG3_PB_SVrefine2PBcRDovetail_6212:HG3_PB_SVrefine2Falcon1Dovetail_7964:HG3_Ill_SVrefine2DISCOVARDovetail_9515:HG2_PB_SVrefine2PBcRplusDovetail_2349:HG2_PB_SVrefine2PB10Xhap12_9525:HG2_PB_SVrefine2Falcon2Bionano_6513:HG2_PB_SVrefine2Falcon1plusDovetail_2482:HG2_Ill_SVrefine2DISCOVARplusDovetail_2744;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0669856;ClusterMaxSizeDiff=0.0663507;ClusterMaxEditDist=0.268519;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=102;DistBack=-102;DistForward=64259;DistMin=-102;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=12:50292019-50292131;PctSeqSimilarity=0.9953;PctSizeSimilarity=1;PctRecOverlap=0.9612;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=1174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:./.:0:0:0:0:./.:0:0:0:0:./.:3:29:./.:.:.:.:.:.
chr12	51217304	HG4_PB_pbsv_13194	T	TTATATATTATGATATATAATCTATATTATATATAATATAGATATATTGATAATATTAGCATTATATATATAATCTATATTATATAATATTTTTTTATATAGATTATTATATAATTATTATATATAATATAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2352:HG3_Ill_MetaSV_1132:HG3_PB_pbsv_12877:HG2_PB_SVrefine2Falcon2Bionano_6515:HG4_PB_pbsv_13194:HG2_PB_pbsv_13196;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_13194;NumExactMatchSVs=1;ClusterMaxShiftDist=0.09319;ClusterMaxSizeDiff=0.09319;ClusterMaxEditDist=0.246269;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=132;DistBack=-203;DistForward=45;DistMin=-203;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=207;REFWIDENED=12:51217305-51217511;PctSeqSimilarity=0.8799;PctSizeSimilarity=0.9242;PctRecOverlap=0.203;SizeDiff=10;StartDistance=-101;EndDistance=-101;GTMatch=0;TruScore=66;MatchId=1175.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:39:./.:14:31:12:9:./.:5:4:0:4:0/1:9:24:./.:.:.:.:.:.
chr12	51892548	HG2_10X_SVrefine210Xhap12_9221	T	TAGCTATTCCGGAGGCTGAGGCACAAGAATCGCTTGAACCCATGAGGCAGAGGTTGCAGTGAGCCGAGATTGTGCCACTCCACTCCAGCCTGGGCGACAGAGTGAGACTTTGTCTCAAAAAAAAAAAAAAAAAGGTAATATAAGTTGCATAAATCTCTTTAGAGGGCAGTTTAACCTTAGAGTCTTAAAAACGTATATGCCCTTTGGCCCAGCAACTCTAATTTTTAAATTTATCCTAAGGATATAATTAGCAATGTAGACAAAATATTTTAATTGTGGTGACATAAAGAAAAAAAGAAAATTAGAGTAAATGTATTACAATGGAATATTGTACAACAGTTTAAAAAAATTTTTTTTTGAGACAGAGTCTCGCTCTGTCTCCAGACTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGCGCACGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCATGTTGGCCAGGATGGTCTTAATCTCTTGACCTCGTGATCCACCCTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGTCTAAAAATAAAGTTTTAAAAAATACTTAATGATGATAAGTATTTTGTAATGATACTCAATGATGTGTGCTGTAGTCCC	20	PASS	ClusterIDs=HG4_Ill_Spiral_1035:HG3_PB_pbsv_12883:HG2_PB_PB10Xdip_7511:HG2_PB_pbsv_13202:HG4_PB_pbsv_13200:HG2_PB_PB10Xdip_7510:HG3_PB_HySA_19887:HG4_PB_HySA_19235:HG4_Ill_GATKHCSBGrefine_9094:HG3_Ill_GATKHCSBGrefine_8707:HG4_Ill_MetaSV_1100:HG2_Ill_GATKHCSBGrefine_8827:HG2_Ill_MetaSV_1032:HG2_Ill_breakscan11_4381:HG4_Ill_SVrefine2DISCOVARDovetail_9397:HG3_PB_SVrefine2PBcRDovetail_6218:HG3_Ill_SVrefine2DISCOVARDovetail_9526:HG2_PB_SVrefine2PBcRplusDovetail_2355:HG2_PB_SVrefine2PB10Xhap12_9533:HG2_Ill_SVrefine2DISCOVARplusDovetail_2752:HG2_10X_SVrefine210Xhap12_9221:HG2_PB_SVrefine2Falcon1plusDovetail_2486:HG2_PB_SVrefine2Falcon2Bionano_6518:HG3_PB_SVrefine2Falcon1Dovetail_7969:HG4_PB_SVrefine2PBcRDovetail_6612:HG4_PB_SVrefine2Falcon1Dovetail_8036:HG3_Ill_Spiral_13723;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9221:HG2_Ill_SVrefine2DISCOVARplusDovetail_2752:HG2_PB_SVrefine2PB10Xhap12_9533:HG2_PB_SVrefine2PBcRplusDovetail_2355;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0876601;ClusterMaxSizeDiff=0.0876601;ClusterMaxEditDist=0.227986;PBcalls=15;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=713;DistBack=74686;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=132;REFWIDENED=12:51892549-51892680;PctSeqSimilarity=0.9979;PctSizeSimilarity=1;PctRecOverlap=0.9874;SizeDiff=0;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=99;MatchId=1176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:0:34:0:14:1/1:0:17:0:17:1/1:0:11:1/1:5:147:.:.:.
chr12	52227866	HG3_Ill_GATKHCSBGrefine_8709	C	CAGACGGATGGGTGGATGGATGGATGGATGGATGGATGAATGGACAGATGGACAGATGGACAGATGGATGAAT	20	PASS	ClusterIDs=HG3_PB_pbsv_12884:HG4_Ill_Krunchall_18281:HG2_PB_HySA_24002:HG4_PB_HySA_19237:HG4_Ill_GATKHC_21094:HG2_PB_pbsv_13203:HG4_PB_pbsv_13201:HG4_Ill_GATKHCSBGrefine_9095:HG4_Ill_150bpfermikitraw_16784:HG3_PB_assemblyticsfalcon_5650:HG3_Ill_GATKHC_20970:HG3_Ill_GATKHCSBGrefine_8709:HG3_Ill_250bpfermikitraw_17124:HG3_Ill_150bpfermikitraw_16630:HG2_PB_assemblyticsPBcR_5457:HG2_Ill_GATKHC_21100:HG2_Ill_GATKHCSBGrefine_8829:HG3_PB_HySA_19889:HG2_PB_PB10Xdip_7513:HG2_PB_PB10Xdip_7512;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8829:HG2_Ill_GATKHC_21100:HG2_PB_assemblyticsPBcR_5457:HG3_Ill_150bpfermikitraw_16630:HG3_Ill_250bpfermikitraw_17124:HG3_Ill_GATKHCSBGrefine_8709:HG3_Ill_GATKHC_20970:HG3_PB_assemblyticsfalcon_5650:HG4_Ill_150bpfermikitraw_16784:HG4_Ill_GATKHCSBGrefine_9095:HG4_Ill_GATKHC_21094:HG4_Ill_Krunchall_18281;NumExactMatchSVs=12;ClusterMaxShiftDist=0.12987;ClusterMaxSizeDiff=0.12987;ClusterMaxEditDist=0.264151;PBcalls=10;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=72;DistBack=53525;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=201;REFWIDENED=12:52227721-52227921;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:3:32:0:9:1/1:1:32:1:38:1/1:2:47:./.:.:.:.:.:.
chr12	52662945	HG2_10X_SVrefine210Xhap12_9225	G	GAGATTATAGGAACTACAATTCAAGATGAGATTTGGGTGGGGACACAACCAAACCATATCAGATGGGGTTTTGCCATGTTGCCCAAGCTGGTCTTGAACTCCTGAGCTCAAGTGGCCCACCTGCCTTGGCCTTCGAAAGTGTTGAGATTACTGGTGTGAGCCACCGTGCCCAGCCTGACATAAATATTTTATCAAGCTAAAGGCAATTAAGAAGATGCAGGGGAGTTCTCTGCTTTCCCTGTGTTTGCCTAAAAGCAGAACAGAGAATTACAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_7514:HG4_PB_assemblyticsfalcon_5561:HG2_PB_pbsv_13204:HG3_PB_pbsv_12885:HG3_PB_assemblyticsfalcon_5652:HG2_PB_assemblyticsfalcon_5657:HG4_PB_SVrefine2Falcon1Dovetail_8037:HG3_PB_SVrefine2PBcRDovetail_6221:HG3_PB_SVrefine2Falcon1Dovetail_7971:HG3_Ill_manta_2985:HG3_Ill_SVrefine2DISCOVARDovetail_9531:HG3_Ill_MetaSV_1133:HG3_Ill_GATKHCSBGrefine_8710:HG2_PB_SVrefine2Falcon1plusDovetail_2488:HG2_Ill_SVrefine2DISCOVARplusDovetail_2755:HG2_Ill_MetaSV_1033:HG2_Ill_GATKHCSBGrefine_8830:HG2_10X_SVrefine210Xhap12_9225:HG4_Ill_MetaSV_1103:HG4_Ill_GATKHCSBGrefine_9099:HG2_PB_HySA_24005:HG2_PB_SVrefine2PB10Xhap12_9535:HG4_PB_HySA_19241:HG2_Ill_breakscan11_4382:HG2_PB_PB10Xdip_7515;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9225:HG2_Ill_GATKHCSBGrefine_8830:HG2_Ill_MetaSV_1033:HG2_Ill_SVrefine2DISCOVARplusDovetail_2755:HG2_PB_SVrefine2Falcon1plusDovetail_2488:HG3_Ill_GATKHCSBGrefine_8710:HG3_Ill_MetaSV_1133:HG3_Ill_SVrefine2DISCOVARDovetail_9531:HG3_Ill_manta_2985:HG3_PB_SVrefine2Falcon1Dovetail_7971:HG3_PB_SVrefine2PBcRDovetail_6221:HG4_PB_SVrefine2Falcon1Dovetail_8037;NumExactMatchSVs=12;ClusterMaxShiftDist=0.297787;ClusterMaxSizeDiff=0.293763;ClusterMaxEditDist=0.325956;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=272;DistBack=-24;DistForward=1;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=12:52662946-52662948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:41:0|1:25:1:1:47:1|0:0:13:21:0:0/1:40:12:./.:.:.:.:.:.
chr12	53542034	HG3_Ill_SVrefine2DISCOVARDovetail_9533	C	CGCCCAGGCTGGAGTGCAATGGCGCTATCTCGGCTCACTGCAAGCTCCGCCTCCCGAGTTCATGCCATTCTCCTGCCTCAGCCTCTCTAGTAACTGGGACTACAGGTGCTCGCCACCACGCCCGGCCAATTTTTTGTATTTTTGAGTAGAGACGGGGTTTCACCATGTTAGCCAGGAAGGTCTCAATCTCCTGACCTCGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCCGGCCCTGAATAGCCATTATCTATTAAAGAAATTGAATTTGTAGTTTAAATCTTCCCCCAGAGAAAATCTGTGTCAATACCTGCTGTACATAATCCTCAAATCTATTTACCCTGGTAGATGGGGACAGCACCCAAACCACCTCCATTTGACATTAAAAAAACACTTCAACTCCTGAGCTAACTTTAAAATGTATGTTGTTATAAGAAAAGCTAAAAATAACATGCTACAAATTAAGAAAGTGTGCGAGCTAATTATGTTGGCACCGGAGAATTTGCTAAAAATGAACTCCAGGAATATTTTCAAAAGTGGGTCATCAGACTGACTGGACCCTTTAACATGTGGAAACTGGATCTAAAGAGCTGACAGAATTGCCTAGAAAAGAAACTACAGAATGATTGTATTTGTTGGGATGAAATAAAGAAATGTTAGCAGGCCAGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGAGGGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGGTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGCAGCTTGCAGTGAGCCGAGATAGCGCCACTGCACTCCCGCCTGGGCGAAAGAGCGAGACTCCGTCTTAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAGAAATGTTAGCTGGACCTGGTAGCATTCAGCTATAGTCCTAGCTACTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTGGAGGCAGCAGTGGGCTATGATTGTGTCACTGCACTCCAGCCAGGGTAACAAAGCAAGACCCTGTCTCTAAAAAAAAAAAAAACAAACAAAAAAAAACAAAAAAACCTTTTTGACACGGAGTTTCGCTCTTGTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8041:HG2_PB_pbsv_13212:HG2_PB_PB10Xdip_7521:HG4_PB_pbsv_13211:HG4_PB_HySA_19248:HG2_PB_assemblyticsPBcR_5472:HG3_PB_HySA_19903:HG3_PB_pbsv_12893:HG2_PB_HySA_24020:HG4_PB_SVrefine2PBcRDovetail_6618:HG2_Ill_GATKHCSBGrefine_8834:HG3_Ill_Spiral_13734:HG3_Ill_SVrefine2DISCOVARDovetail_9533:HG3_Ill_GATKHCSBGrefine_8717:HG2_10X_SVrefine210Xhap12_9232:HG2_PB_SVrefine2Falcon2Bionano_6525:HG3_Ill_MetaSV_1135:HG3_PB_SVrefine2PBcRDovetail_6225:HG4_Ill_GATKHCSBGrefine_9102:HG4_Ill_MetaSV_1104:HG2_PB_SVrefine2PBcRplusDovetail_2360:HG2_PB_SVrefine2PB10Xhap12_9540:HG2_Ill_MetaSV_1036:HG2_PB_assemblyticsfalcon_5667:HG2_PB_SVrefine2Falcon1plusDovetail_2491:HG4_Ill_SVrefine2DISCOVARDovetail_9405:HG2_Ill_SVrefine2DISCOVARplusDovetail_2760:HG3_PB_assemblyticsfalcon_5665:HG3_PB_SVrefine2Falcon1Dovetail_7975:HG4_PB_assemblyticsfalcon_5572;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9232:HG3_Ill_GATKHCSBGrefine_8717:HG3_Ill_SVrefine2DISCOVARDovetail_9533:HG3_Ill_Spiral_13734;NumExactMatchSVs=4;ClusterMaxShiftDist=0.175556;ClusterMaxSizeDiff=0.175556;ClusterMaxEditDist=0.220539;PBcalls=19;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=1219;DistBack=694;DistForward=55396;DistMin=694;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=84;REFWIDENED=12:53542035-53542118;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=0.9967;SizeDiff=4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:21:0:26:1/1:0:9:0:10:1/1:0:21:0/1:15:125:.:1398:.
chr12	53684500	HG2_Ill_Cortex_1848	G	GTTTTAGCTTTCATTGCCACCTGTTCATATTTGTCACAACAGAGGGATAGATAATAGTCTATACTCTCCCAGTCTCAGAAAATGAAAAAAGTTTCTAGATTCTTGCCTTCTATTAGTCATAACTTCTGTTAGTCATAACTAA	20	PASS	ClusterIDs=HG4_PB_pbsv_13212:HG2_Ill_breakscan11_4383:HG2_PB_pbsv_13213:HG4_PB_assemblyticsfalcon_5573:HG4_PB_SVrefine2Falcon1Dovetail_8042:HG4_Ill_svaba_16483:HG4_Ill_manta_3099:HG4_Ill_MetaSV_1105:HG4_Ill_GATKHCSBGrefine_9103:HG4_Ill_Cortex_757:HG4_Ill_250bpfermikitraw_17460:HG4_Ill_150bpfermikitraw_16796:HG3_PB_assemblyticsfalcon_5666:HG3_Ill_svaba_16561:HG3_Ill_manta_2986:HG3_Ill_Spiral_13736:HG3_Ill_MetaSV_1136:HG3_Ill_GATKHCSBGrefine_8718:HG3_Ill_Cortex_799:HG3_Ill_250bpfermikitraw_17137:HG3_Ill_150bpfermikitraw_16641:HG2_PB_assemblyticsfalcon_5668:HG2_PB_assemblyticsPBcR_5473:HG2_PB_SVrefine2Falcon2Bionano_6526:HG2_Ill_svaba_16422:HG2_Ill_manta_3659:HG2_Ill_SpiralSDKrefine_3543:HG2_Ill_SVrefine2DISCOVARplusDovetail_2762:HG2_Ill_MetaSV_1037:HG2_Ill_GATKHCSBGrefine_8835:HG2_Ill_Cortex_1848:HG2_Ill_250bpfermikitraw_17628:HG2_Ill_150bpfermikitraw_16597:HG2_10X_SVrefine210Xhap12_9233:HG3_PB_pbsv_12894:HG4_PB_SVrefine2PBcRDovetail_6619:HG4_Ill_SVrefine2DISCOVARDovetail_9408:HG3_PB_SVrefine2PBcRDovetail_6226:HG3_PB_SVrefine2Falcon1Dovetail_7976:HG3_Ill_SVrefine2DISCOVARDovetail_9534:HG2_PB_SVrefine2PBcRplusDovetail_2361:HG2_PB_SVrefine2Falcon1plusDovetail_2492;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9233:HG2_Ill_150bpfermikitraw_16597:HG2_Ill_250bpfermikitraw_17628:HG2_Ill_Cortex_1848:HG2_Ill_GATKHCSBGrefine_8835:HG2_Ill_MetaSV_1037:HG2_Ill_SVrefine2DISCOVARplusDovetail_2762:HG2_Ill_SpiralSDKrefine_3543:HG2_Ill_manta_3659:HG2_Ill_svaba_16422:HG2_PB_SVrefine2Falcon2Bionano_6526:HG2_PB_assemblyticsPBcR_5473:HG2_PB_assemblyticsfalcon_5668:HG3_Ill_150bpfermikitraw_16641:HG3_Ill_250bpfermikitraw_17137:HG3_Ill_Cortex_799:HG3_Ill_GATKHCSBGrefine_8718:HG3_Ill_MetaSV_1136:HG3_Ill_Spiral_13736:HG3_Ill_manta_2986:HG3_Ill_svaba_16561:HG3_PB_assemblyticsfalcon_5666:HG4_Ill_150bpfermikitraw_16796:HG4_Ill_250bpfermikitraw_17460:HG4_Ill_Cortex_757:HG4_Ill_GATKHCSBGrefine_9103:HG4_Ill_MetaSV_1105:HG4_Ill_manta_3099:HG4_Ill_svaba_16483;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0684932;ClusterMaxSizeDiff=0.0684932;ClusterMaxEditDist=0.234899;PBcalls=14;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=141;DistBack=-1;DistForward=43010;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=12:53684501-53684500;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:35:./.:1:1:0:1:1/1:0:13:0:13:1/1:0:28:./.:.:.:.:.:.
chr12	53748375	HG2_PB_SVrefine2Falcon2Bionano_6527	A	AAAACCCCATCTCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_19249:HG3_PB_pbsv_12895:HG3_PB_HySA_19905:HG4_PB_assemblyticsfalcon_5575:HG2_PB_pbsv_13214:HG4_PB_SVrefine2Falcon1Dovetail_8043:HG2_PB_assemblyticsPBcR_5474:HG2_PB_assemblyticsfalcon_5669:HG3_PB_assemblyticsfalcon_5668:HG3_PB_SVrefine2PBcRDovetail_6227:HG4_PB_SVrefine2PBcRDovetail_6620:HG4_Ill_SVrefine2DISCOVARDovetail_9409:HG4_Ill_GATKHCSBGrefine_9104:HG2_PB_SVrefine2Falcon2Bionano_6527:HG2_Ill_GATKHCSBGrefine_8836:HG2_PB_SVrefine2PBcRplusDovetail_2362:HG2_10X_SVrefine210Xhap12_9234:HG2_PB_SVrefine2Falcon1plusDovetail_2493:HG3_PB_SVrefine2Falcon1Dovetail_7977:HG4_PB_pbsv_13213:HG2_PB_HySA_24021;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8836:HG2_PB_SVrefine2Falcon2Bionano_6527:HG4_Ill_GATKHCSBGrefine_9104:HG4_Ill_SVrefine2DISCOVARDovetail_9409:HG4_PB_SVrefine2PBcRDovetail_6620;NumExactMatchSVs=5;ClusterMaxShiftDist=0.148377;ClusterMaxSizeDiff=0.148377;ClusterMaxEditDist=0.206278;PBcalls=17;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=323;DistBack=6494;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=12:53748376-53748389;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:25:./.:1:4:0:2:./.:0:3:0:8:./.:1:19:1/1:1:79:.:.:.
chr12	54147630	HG2_Ill_GATKHC_21119	A	AGTGGTGGTAGAGGTATAGGACAGCAATGTAAAATGTCCTGCTGTTGTAGCTCTACCGTGACCCTGGGCTGAGATGTTCTTGAAGACACCTGGGATAGGATAGCC	20	PASS	ClusterIDs=HG3_PB_HySA_19908:HG2_PB_pbsv_13216:HG4_PB_assemblyticsfalcon_5580:HG4_PB_SVrefine2Falcon1Dovetail_8046:HG4_PB_HySA_19252:HG4_Ill_GATKHC_21113:HG4_Ill_GATKHCSBGrefine_9107:HG3_Ill_GATKHC_20991:HG3_Ill_GATKHCSBGrefine_8722:HG2_Ill_GATKHC_21119:HG2_PB_HySA_24024:HG3_PB_pbsv_12898:HG3_PB_SVrefine2PBcRDovetail_6229:HG4_PB_pbsv_13215:HG3_PB_SVrefine2Falcon1Dovetail_7980:HG3_Ill_SVrefine2DISCOVARDovetail_9537:HG2_PB_SVrefine2Falcon1plusDovetail_2494:HG2_10X_SVrefine210Xhap12_9237;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHC_21119:HG3_Ill_GATKHCSBGrefine_8722:HG3_Ill_GATKHC_20991:HG4_Ill_GATKHCSBGrefine_9107:HG4_Ill_GATKHC_21113;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0657277;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.285714;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=104;DistBack=-59;DistForward=58607;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=12:54147588-54147700;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1183.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:33:0|1:19:1:1:34:./.:2:14:9:0:0/1:23:12:./.:.:.:.:.:.
chr12	54324312	HG4_Ill_GATKHCSBGrefine_9109	G	GGTCTTGGCCGTGGATGTTGCGAAGAGAAATTGGCAGTCAGGATGTATCCCTCTGGAGGCACAGGGACCTAGCTCCCGACGCTCCGCGTCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6622:HG4_PB_pbsv_13217:HG2_PB_pbsv_13218:HG4_PB_assemblyticsfalcon_5584:HG3_PB_pbsv_12900:HG2_Ill_breakscan11_4384:HG2_PB_HySA_24028:HG4_Ill_svaba_16486:HG4_Ill_manta_3102:HG4_Ill_Krunchall_18300:HG4_Ill_GATKHCSBGrefine_9109:HG4_Ill_Cortex_758:HG4_Ill_250bpfermikitraw_17466:HG4_Ill_150bpfermikitraw_16801:HG3_Ill_svaba_16566:HG3_Ill_manta_2988:HG3_Ill_Spiral_13740:HG3_Ill_SVrefine2DISCOVARDovetail_9539:HG3_Ill_Krunchall_17629:HG3_Ill_GATKHCSBGrefine_8724:HG3_Ill_Cortex_801:HG3_Ill_250bpfermikitraw_17143:HG3_Ill_150bpfermikitraw_16645:HG2_Ill_svaba_16426:HG2_Ill_manta_3661:HG2_Ill_SpiralSDKrefine_3546:HG2_Ill_Krunchall_17974:HG2_Ill_GATKHCSBGrefine_8840:HG2_Ill_Cortex_1849:HG2_Ill_250bpfermikitraw_17633:HG2_Ill_150bpfermikitraw_16602:HG2_10X_SVrefine210Xhap12_9240:HG4_PB_SVrefine2Falcon1Dovetail_8048;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9240:HG2_Ill_150bpfermikitraw_16602:HG2_Ill_250bpfermikitraw_17633:HG2_Ill_Cortex_1849:HG2_Ill_GATKHCSBGrefine_8840:HG2_Ill_Krunchall_17974:HG2_Ill_SpiralSDKrefine_3546:HG2_Ill_manta_3661:HG2_Ill_svaba_16426:HG3_Ill_150bpfermikitraw_16645:HG3_Ill_250bpfermikitraw_17143:HG3_Ill_Cortex_801:HG3_Ill_GATKHCSBGrefine_8724:HG3_Ill_Krunchall_17629:HG3_Ill_SVrefine2DISCOVARDovetail_9539:HG3_Ill_Spiral_13740:HG3_Ill_manta_2988:HG3_Ill_svaba_16566:HG4_Ill_150bpfermikitraw_16801:HG4_Ill_250bpfermikitraw_17466:HG4_Ill_Cortex_758:HG4_Ill_GATKHCSBGrefine_9109:HG4_Ill_Krunchall_18300:HG4_Ill_manta_3102:HG4_Ill_svaba_16486;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.15873;PBcalls=7;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=90;DistBack=20029;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=12:54324313-54324314;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:21:0|1:29:1:2:17:0|1:23:0:0:40:0/1:28:34:./.:.:.:.:.:.
chr12	54602920	HG2_Ill_SVrefine2DISCOVARplusDovetail_2764	C	CCAGGCTGGAGTGCAGTGGCCCAATCTTGGCTCACTGCAACCTCCGCCTGCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCGCACCACCACGCCCAGATAATTTTTGTATTTTTAGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACGCCTGACCTCGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCACCGTGCCCAGCCGAGAATTTGACATATTATATATAAAGTGCCTGCCTCAAATTGTAGCTGATATTGTGCCAGGTGCAGTGGCTCACGCCTGTAATCGCAGCACTTTGGGAGGCCGAGGCGGGAGGATCACCTAAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCTCATCTCTACTAAAAATACAAAAATTAGCCAGGGGTGTTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACTGCTTGATCCTGGGAGGCGGAGGTTGTAGTGAGCCAAGATCGCGCCGCTGCACTCCAGCCCAGGCAACAGAGCAAGACTCCATTTAAAAAAAAAAAACGTAGCTGATATTATTAGCTATTACAGAGTTTGTAAATAAGGCAAAAAACTAGAGATTCCCACCCCACTTAACGGTCCTAGAAATTTTTCGCTAATCCTGCTCCCAAGGCAGTCCCTATGCTGCAAGTGTCCGTCCCACCTCTCAATAGGGTGGTCCCATCCCAGGCCTCTCCACCTCCCCACCCTTCTGCCTGGTTTTGTGTGTGTGTTGCCCTCTGCTGGCAATGGAAAGAACTGCACATTCTTCTCCCCTCTGCAGCCTGGAAAGCTGAGGCTTTAGACGGAGTGGAGAAGAGTTACCGCTGTGAAATCCATAAAAGAACCGTAGACAATAGGCCCCAGAGAGGTTTGGGAGTAGGAATCAGAAACTAGAGTGCCTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTTGTTGTTGTTATTGTTGTTGTTTTGGAGACGGAGTTTCACTCTGTCTCT	20	PASS	ClusterIDs=HG4_PB_pbsv_13219:HG3_PB_HySA_19914:HG2_PB_pbsv_13220:HG4_PB_HySA_19257:HG3_PB_pbsv_12901:HG4_Ill_MetaSV_1108:HG2_Ill_MetaSV_1040:HG2_Ill_GATKHCSBGrefine_8841:HG3_Ill_MetaSV_1140:HG3_Ill_GATKHCSBGrefine_8726:HG2_PB_HySA_24032:HG4_PB_SVrefine2PBcRDovetail_6623:HG4_Ill_SVrefine2DISCOVARDovetail_9412:HG2_PB_SVrefine2PBcRplusDovetail_2364:HG2_Ill_SVrefine2DISCOVARplusDovetail_2764:HG2_10X_SVrefine210Xhap12_9241:HG2_PB_SVrefine2Falcon2Bionano_6530:HG2_PB_SVrefine2Falcon1plusDovetail_2497:HG3_PB_SVrefine2Falcon1Dovetail_7982:HG3_Ill_SVrefine2DISCOVARDovetail_9540:HG4_PB_SVrefine2Falcon1Dovetail_8050:HG3_PB_SVrefine2PBcRDovetail_6231;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9241:HG2_Ill_SVrefine2DISCOVARplusDovetail_2764:HG2_PB_SVrefine2PBcRplusDovetail_2364:HG4_Ill_SVrefine2DISCOVARDovetail_9412:HG4_PB_SVrefine2PBcRDovetail_6623;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0913614;ClusterMaxSizeDiff=0.071103;ClusterMaxEditDist=0.268617;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1073;DistBack=4210;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=233;REFWIDENED=12:54602921-54603153;PctSeqSimilarity=0.9956;PctSizeSimilarity=1;PctRecOverlap=0.9432;SizeDiff=0;StartDistance=-61;EndDistance=-61;GTMatch=0;TruScore=97;MatchId=1186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:41:./.:0:0:0:0:./.:0:0:0:4:1/1:0:26:0/1:20:124:.:1572:.
chr12	58359057	HG2_PB_SVrefine2Falcon2Bionano_6537	C	CAAAAGAAAGGAAATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTAAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_24054:HG3_PB_HySA_19936:HG4_PB_pbsv_13232:HG3_PB_pbsv_12913:HG2_PB_pbsv_13230:HG3_PB_assemblyticsfalcon_5696:HG3_PB_SVrefine2PBcRDovetail_6238:HG2_PB_SVrefine2Falcon2Bionano_6537:HG2_PB_SVrefine2PB10Xhap12_9550:HG4_PB_SVrefine2PBcRDovetail_6632:HG2_PB_SVrefine2PBcRplusDovetail_2371:HG2_10X_SVrefine210Xhap12_9251:HG4_PB_SVrefine2Falcon1Dovetail_8060:HG2_PB_SVrefine2Falcon1plusDovetail_2505:HG2_PB_PB10Xdip_7545:HG2_PB_PB10Xdip_7546;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6537:HG3_PB_SVrefine2PBcRDovetail_6238;NumExactMatchSVs=2;ClusterMaxShiftDist=0.144578;ClusterMaxSizeDiff=0.144578;ClusterMaxEditDist=0.198795;PBcalls=15;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=333;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=12:58359058-58359071;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:0:21:0:5:./.:0:3:0:2:1/1:0:27:1/1:1:48:.:.:.
chr12	58458206	HG2_Ill_MetaSV_1042	T	TAAAAATATTCTAATGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4387:HG4_PB_pbsv_13233:HG3_PB_pbsv_12914:HG2_PB_PB10Xdip_7548:HG3_PB_assemblyticsfalcon_5697:HG2_PB_assemblyticsPBcR_5509:HG2_PB_PB10Xdip_7547:HG4_PB_SVrefine2PBcRDovetail_6633:HG3_Ill_manta_2994:HG3_Ill_MetaSV_1147:HG3_Ill_GATKHCSBGrefine_8736:HG2_PB_SVrefine2PBcRplusDovetail_2372:HG2_PB_SVrefine2PB10Xhap12_9551:HG2_PB_SVrefine2Falcon2Bionano_6538:HG2_PB_SVrefine2Falcon1plusDovetail_2506:HG2_Ill_MetaSV_1042:HG4_Ill_MetaSV_1113:HG4_Ill_GATKHCSBGrefine_9123:HG2_Ill_GATKHCSBGrefine_8849:HG2_10X_SVrefine210Xhap12_9252:HG4_PB_SVrefine2Falcon1Dovetail_8061:HG2_PB_pbsv_13231;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_MetaSV_1042:HG2_PB_SVrefine2Falcon1plusDovetail_2506:HG2_PB_SVrefine2Falcon2Bionano_6538:HG2_PB_SVrefine2PB10Xhap12_9551:HG2_PB_SVrefine2PBcRplusDovetail_2372:HG3_Ill_GATKHCSBGrefine_8736:HG3_Ill_MetaSV_1147:HG3_Ill_manta_2994;NumExactMatchSVs=8;ClusterMaxShiftDist=0.165342;ClusterMaxSizeDiff=0.165342;ClusterMaxEditDist=0.222576;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=314;DistBack=1703;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5037;REFWIDENED=12:58458207-58451769;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:12:0:11:1/1:0:5:0:9:1/1:0:33:1/1:2:31:.:.:.
chr12	58856544	HG3_Ill_GATKHCSBGrefine_8737	T	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTTTC	20	PASS	ClusterIDs=HG2_PB_pbsv_13236:HG3_Ill_manta_2996:HG2_PB_assemblyticsfalcon_5712:HG3_Ill_GATKHC_21037:HG3_Ill_GATKHCSBGrefine_8737:HG3_Ill_150bpfermikitraw_16680:HG2_Ill_GATKHCSBGrefine_8850:HG2_Ill_150bpfermikitraw_16626:HG3_PB_pbsv_12919;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16626:HG2_Ill_GATKHCSBGrefine_8850:HG3_Ill_150bpfermikitraw_16680:HG3_Ill_GATKHCSBGrefine_8737:HG3_Ill_GATKHC_21037;NumExactMatchSVs=5;ClusterMaxShiftDist=0.119658;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.275862;PBcalls=3;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=18;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=12:58856543-58856545;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:0|1:29:1:0:40:1|0:0:16:13:0:0/1:15:9:./.:.:.:.:.:.
chr12	59029086	HG2_PB_PB10Xdip_7551	ATCAGATCAGAGATATTTAGTAAATAAT	TCATTTTTCTTCTTTCTTTCTCTCTCTTCTTCTATCCGAGCCAAGCTGACGTACTGCTGCCACTGCAACCCCTGCCTGATTCCTGCCTCAGCCTGCGATTGCAGGCACGCACGCACTGACGTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAGCCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCAGAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTGGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCAAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGCGGGGGGGGTCGTCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGACGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCTGGGAGGGAGGTGGGGGGGTCATCCCCCCACCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCTGGCCAGCTGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGTCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGAAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTGTCAGCCCCCCTTCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCTGCCCCGTCCGGGAGGGAGGTGGGGGGGACAGCCCCCCGCCCAGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGTCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCACCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGTCTGTGATAGAAGTAGACATGGAGACTTTCATTTGTTCTTACTAAGAAAAATTCTTCTGCTTGGATCTGTTGATCTGTGATTATCCCAACCTTGCTCTCTGAAACATGTGTGTTCACTCAGGTTAAATGATTAAGGCGTGCAAGATGTGCTTTGTTAAACAGATTGAAGAAGCTTAAGATAAATTAATAAAAAAAAAAAAAAAAAAAAAAAAAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_24062:HG2_PB_pbsv_13237:HG2_PB_SVrefine2PB10Xhap12_9554:HG2_PB_PB10Xdip_7551:HG2_PB_assemblyticsfalcon_5715:HG2_PB_assemblyticsPBcR_5516;NumClusterSVs=6;ExactMatchIDs=HG2_PB_PB10Xdip_7551:HG2_PB_SVrefine2PB10Xhap12_9554;NumExactMatchSVs=2;ClusterMaxShiftDist=0.130435;ClusterMaxSizeDiff=0.130435;ClusterMaxEditDist=0.188797;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2372;DistBack=-28;DistForward=57981;DistMin=-28;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:59029114-59029085;PctSeqSimilarity=0.9424;PctSizeSimilarity=0.8897;PctRecOverlap=0.8999;SizeDiff=-294;StartDistance=5;EndDistance=32;GTMatch=0;TruScore=91;MatchId=1192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:43:0|1:37:0:2:24:0/0:30:0:13:0:0/0:57:0:0/1:106:212:.:2637:.
chr12	60225837	HG4_Ill_SVrefine2DISCOVARDovetail_9428	T	TTTCTTCCTTCCTTTCCTTCCCTTCCCCTTCCCCTTCCTTCCTTCCTTTCCTTCCTTCCCTTCCCTTGCCTTCCCCTTCCTTCCTTTCCTTCCTTCCCTTCCCTTGCCTTCCCCTTCCTTCCTTCCTCCCTCCACCCTCCC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_1116:HG4_PB_assemblyticsfalcon_5629:HG2_PB_assemblyticsPBcR_5521:HG2_PB_HySA_24068:HG2_PB_PB10Xdip_7566:HG2_PB_PB10Xdip_7567:HG2_PB_SVrefine2PB10Xhap12_9556:HG2_10X_SVrefine210Xhap12_9261:HG2_PB_SVrefine2Falcon2Bionano_6542:HG4_PB_SVrefine2PBcRDovetail_6635:HG4_PB_SVrefine2Falcon1Dovetail_8066:HG4_Ill_SVrefine2DISCOVARDovetail_9428:HG4_Ill_GATKHC_21154:HG4_Ill_GATKHCSBGrefine_9128:HG3_Ill_SVrefine2DISCOVARDovetail_9554:HG2_PB_SVrefine2PBcRplusDovetail_2377:HG2_Ill_SVrefine2DISCOVARplusDovetail_2782:HG2_Ill_GATKHCSBGrefine_8857:HG4_PB_HySA_19290;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8857:HG2_Ill_SVrefine2DISCOVARplusDovetail_2782:HG2_PB_SVrefine2PBcRplusDovetail_2377:HG3_Ill_SVrefine2DISCOVARDovetail_9554:HG4_Ill_GATKHCSBGrefine_9128:HG4_Ill_GATKHC_21154:HG4_Ill_SVrefine2DISCOVARDovetail_9428:HG4_PB_SVrefine2Falcon1Dovetail_8066:HG4_PB_SVrefine2PBcRDovetail_6635;NumExactMatchSVs=9;ClusterMaxShiftDist=0.141844;ClusterMaxSizeDiff=0.141844;ClusterMaxEditDist=0.156028;PBcalls=11;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=140;DistBack=4;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=131;REFWIDENED=12:60225774-60225904;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:22:0:34:1/1:1:30:1:49:1/1:0:25:./.:.:.:.:.:.
chr12	60548146	HG2_PB_HySA_24072	T	TAAAAGACCAATCTGGGCGGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGAGCCGAGCGGTGGATCACGAGCTCAGAGATCGAGACCATCCTGCTAACAAGTGAAACCCGTCTTACTAAAAATACAAAAAATTAGCCGGCGTGGCGGGGCCTGTAGTCCAGCTACTCGGAGCTAGCAGAGAATGCGTGAACCCGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCACTGCAGTCAGCGCCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_HySA_19292:HG2_PB_pbsv_13247:HG4_PB_assemblyticsfalcon_5633:HG2_PB_assemblyticsPBcR_5526:HG2_PB_HySA_24072:HG2_PB_SVrefine2Falcon1plusDovetail_2509:HG2_PB_SVrefine2Falcon2Bionano_6544:HG3_PB_SVrefine2Falcon1Dovetail_7997:HG4_PB_SVrefine2PBcRDovetail_6640:HG2_PB_SVrefine2PBcRplusDovetail_2380:HG4_PB_pbsv_13246;NumClusterSVs=11;ExactMatchIDs=HG2_PB_HySA_24072;NumExactMatchSVs=1;ClusterMaxShiftDist=0.194903;ClusterMaxSizeDiff=0.194903;ClusterMaxEditDist=0.275862;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=299;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=12:60548147-60548157;PctSeqSimilarity=0.9373;PctSizeSimilarity=0.8872;PctRecOverlap=0.8872;SizeDiff=-38;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=1194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:39:./.:16:10:15:15:./.:20:0:3:2:0/1:33:5:0/1:8:14:.:.:.
chr12	60677830	HG2_Ill_GATKHCSBGrefine_8862	A	AGTCAATTCTATTTTATGTGTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2510:HG4_PB_pbsv_13247:HG4_PB_HySA_19293:HG3_PB_pbsv_12928:HG2_PB_HySA_24074:HG2_PB_pbsv_13248:HG3_PB_HySA_19948:HG2_PB_HySA_24073:HG2_Ill_breakscan11_4388:HG3_PB_SVrefine2PBcRDovetail_6247:HG4_Ill_GATKHCSBGrefine_9133:HG3_PB_SVrefine2Falcon1Dovetail_7998:HG3_Ill_MetaSV_1152:HG3_Ill_GATKHCSBGrefine_8741:HG2_Ill_MetaSV_1048:HG2_Ill_GATKHCSBGrefine_8862;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8862:HG2_Ill_MetaSV_1048:HG3_Ill_GATKHCSBGrefine_8741:HG3_Ill_MetaSV_1152:HG3_PB_SVrefine2Falcon1Dovetail_7998:HG4_Ill_GATKHCSBGrefine_9133;NumExactMatchSVs=6;ClusterMaxShiftDist=0.063253;ClusterMaxSizeDiff=0.0573152;ClusterMaxEditDist=0.139881;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=69622;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:60677831-60677845;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:34:./.:15:10:17:26:1|0:0:12:21:0:0/1:19:12:0/1:6:35:.:.:.
chr12	61704135	HG2_PB_SVrefine2Falcon2Bionano_6546	T	TAAAAATTTTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8000:HG2_PB_pbsv_13251:HG4_PB_assemblyticsfalcon_5637:HG3_PB_pbsv_12931:HG2_PB_PB10Xdip_7587:HG3_PB_assemblyticsfalcon_5724:HG2_PB_HySA_24080:HG3_PB_HySA_19955:HG2_PB_SVrefine2Falcon1plusDovetail_2513:HG3_Ill_GATKHCSBGrefine_8745:HG2_PB_SVrefine2PB10Xhap12_9563:HG2_PB_SVrefine2Falcon2Bionano_6546:HG4_PB_SVrefine2Falcon1Dovetail_8071;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6546:HG2_PB_SVrefine2PB10Xhap12_9563:HG3_Ill_GATKHCSBGrefine_8745;NumExactMatchSVs=3;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.121795;ClusterMaxEditDist=0.199387;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=322;DistBack=1;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=12:61704136-61704147;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:51:./.:24:22:10:25:1|0:0:11:19:0:0/1:39:10:0/1:4:17:.:.:.
chr12	61838512	HG4_PB_SVrefine2Falcon1Dovetail_8072	A	TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGAGTAGCTGGGACTACAGGCGCCCGTACCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCAACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCGCGCCCGCCTCGGCCTCCAAAGTGCTGGTTACAGGCGTGAGCCACACGCCGGCCAATTTC	20	PASS	ClusterIDs=HG2_PB_HySA_24083:HG4_PB_assemblyticsfalcon_5641:HG4_PB_SVrefine2Falcon1Dovetail_8072:HG3_PB_pbsv_12932:HG3_PB_assemblyticsfalcon_5725:HG2_PB_pbsv_13253:HG2_Ill_breakscan11_4389:HG2_Ill_MetaSV_1050:HG3_Ill_GATKHCSBGrefine_8746:HG2_Ill_GATKHCSBGrefine_8867:HG3_PB_SVrefine2Falcon1Dovetail_8001:HG2_PB_SVrefine2Falcon2Bionano_6547:HG2_PB_SVrefine2Falcon1plusDovetail_2514;NumClusterSVs=13;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_8072:HG4_PB_assemblyticsfalcon_5641;NumExactMatchSVs=2;ClusterMaxShiftDist=0.115756;ClusterMaxSizeDiff=0.109325;ClusterMaxEditDist=0.232772;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=305;DistBack=1;DistForward=57671;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:61838513-61838511;PctSeqSimilarity=0.9764;PctSizeSimilarity=0.9713;PctRecOverlap=0.9619;SizeDiff=-9;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=96;MatchId=1198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:1|0:5:22:32:2:1|0:0:11:22:0:0/1:19:13:0/1:8:18:.:.:.
chr12	64597828	HG4_Ill_GATKHCSBGrefine_9146	G	GCTTTGCAGGGACAAGGATGAAGCTGTAAGCCATTATCCTCAGCAAACTAACGTAGGAACAGAAAACTAAACACTGCATGTTCTCA	20	PASS	ClusterIDs=HG4_PB_HySA_19322:HG2_PB_HySA_24107:HG2_PB_pbsv_13264:HG4_PB_pbsv_13264:HG4_Ill_GATKHC_21196:HG4_Ill_GATKHCSBGrefine_9146:HG4_Ill_250bpfermikitraw_17526:HG2_Ill_GATKHC_21194:HG2_Ill_GATKHCSBGrefine_8875:HG2_Ill_250bpfermikitraw_17700;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17700:HG2_Ill_GATKHCSBGrefine_8875:HG2_Ill_GATKHC_21194:HG4_Ill_250bpfermikitraw_17526:HG4_Ill_GATKHCSBGrefine_9146:HG4_Ill_GATKHC_21196;NumExactMatchSVs=6;ClusterMaxShiftDist=0.100559;ClusterMaxSizeDiff=0.100559;ClusterMaxEditDist=0.313514;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=85;DistBack=31631;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=177;REFWIDENED=12:64597740-64597916;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:18:0|1:26:2:0:11:0|1:14:0:2:27:0/1:21:26:./.:.:.:.:.:.
chr12	65177628	HG3_PB_SVrefine2PBcRDovetail_6257	T	TGGTTTTTTTTTTTTTTAAATAGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCGATCTTGGCTCACTGCAACTTTCGCCTCCTGGTTTCAAGCGTTGCTCCTGATCCAGCCTCCCAAGTAGCTGGGATTACAGCCATGTGCCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_7613:HG4_PB_pbsv_13273:HG2_PB_assemblyticsfalcon_5756:HG3_PB_pbsv_12948:HG3_PB_assemblyticsfalcon_5745:HG4_PB_assemblyticsfalcon_5673:HG2_PB_HySA_24121:HG4_PB_HySA_19327:HG4_Ill_manta_3119:HG4_Ill_SVrefine2DISCOVARDovetail_9449:HG4_Ill_MetaSV_1126:HG4_Ill_GATKHCSBGrefine_9153:HG4_Ill_250bpfermikitraw_17534:HG4_Ill_150bpfermikitraw_16872:HG3_PB_SVrefine2PBcRDovetail_6257:HG3_PB_SVrefine2Falcon1Dovetail_8008:HG3_Ill_manta_3005:HG3_Ill_Spiral_13801:HG3_Ill_SVrefine2DISCOVARDovetail_9579:HG3_Ill_MetaSV_1158:HG3_Ill_GATKHCSBGrefine_8758:HG3_Ill_250bpfermikitraw_17213:HG3_Ill_150bpfermikitraw_16716:HG2_PB_SVrefine2PBcRplusDovetail_2393:HG2_PB_SVrefine2PB10Xhap12_9576:HG2_PB_SVrefine2Falcon2Bionano_6556:HG2_PB_SVrefine2Falcon1plusDovetail_2522:HG2_Ill_manta_3678:HG2_Ill_SVrefine2DISCOVARplusDovetail_2799:HG2_Ill_MetaSV_1057:HG2_Ill_GATKHCSBGrefine_8878:HG2_10X_SVrefine210Xhap12_9281:HG3_PB_HySA_19988:HG2_PB_pbsv_13271:HG4_PB_SVrefine2Falcon1Dovetail_8083:HG2_PB_PB10Xdip_7614;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9281:HG2_Ill_GATKHCSBGrefine_8878:HG2_Ill_MetaSV_1057:HG2_Ill_SVrefine2DISCOVARplusDovetail_2799:HG2_Ill_manta_3678:HG2_PB_SVrefine2Falcon1plusDovetail_2522:HG2_PB_SVrefine2Falcon2Bionano_6556:HG2_PB_SVrefine2PB10Xhap12_9576:HG2_PB_SVrefine2PBcRplusDovetail_2393:HG3_Ill_150bpfermikitraw_16716:HG3_Ill_250bpfermikitraw_17213:HG3_Ill_GATKHCSBGrefine_8758:HG3_Ill_MetaSV_1158:HG3_Ill_SVrefine2DISCOVARDovetail_9579:HG3_Ill_Spiral_13801:HG3_Ill_manta_3005:HG3_PB_SVrefine2Falcon1Dovetail_8008:HG3_PB_SVrefine2PBcRDovetail_6257:HG4_Ill_150bpfermikitraw_16872:HG4_Ill_250bpfermikitraw_17534:HG4_Ill_GATKHCSBGrefine_9153:HG4_Ill_MetaSV_1126:HG4_Ill_SVrefine2DISCOVARDovetail_9449:HG4_Ill_manta_3119;NumExactMatchSVs=24;ClusterMaxShiftDist=0.119171;ClusterMaxSizeDiff=0.119171;ClusterMaxEditDist=0.204082;PBcalls=18;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=188;DistBack=24307;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=12:65177629-65177633;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:38:1/1:0:23:0:19:1/1:0:12:0:7:1/1:0:28:./.:.:.:.:.:.
chr12	65818782	HG2_Ill_SVrefine2DISCOVARplusDovetail_2802	C	CTATATATATATATTTAGGTCCTCTGGTTTTGGTCATATATATAAATATATATAAATATATATAAATATATATATAAATATATATTTAGCTATATTTATATCAGATAAAATGGATTAAAAGTCAAAAACTGTAAAATGAGACAAAGAAGGCCATTATATAACGATAAAGCAGTCAATTCTTCAAGAACATATAACTACTGTAAATATATATATTATATATATATAAAACCAAAACCAGAAGACCTAATTATATATATATATTTAGGTCCTCTGGTTTTGGTTTTTTATATATATATATATATATTTAGGTCTTCTGGTTTTGGTTTTATATATATATTTATATAAATATAAATATATAAATATATATAATTATATATATATTTAGGTCCTCTGGTTTTGGTTATATG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6259:HG3_PB_pbsv_12950:HG3_Ill_GATKHCSBGrefine_8760:HG2_PB_HySA_24126:HG4_PB_pbsv_13277:HG2_PB_PB10Xdip_7618:HG2_PB_PB10Xdip_7617:HG2_PB_SVrefine2PB10Xhap12_9577:HG2_Ill_MetaSV_1058:HG2_PB_SVrefine2Falcon1plusDovetail_2523:HG2_PB_SVrefine2PBcRplusDovetail_2394:HG4_Ill_SVrefine2DISCOVARDovetail_9451:HG2_Ill_SVrefine2DISCOVARplusDovetail_2802:HG2_Ill_GATKHCSBGrefine_8880:HG3_Ill_SVrefine2DISCOVARDovetail_9583:HG2_PB_SVrefine2Falcon2Bionano_6558;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8880:HG2_Ill_SVrefine2DISCOVARplusDovetail_2802:HG4_Ill_SVrefine2DISCOVARDovetail_9451;NumExactMatchSVs=3;ClusterMaxShiftDist=0.225877;ClusterMaxSizeDiff=0.223684;ClusterMaxEditDist=0.313043;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=406;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=12:65818783-65818836;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1202.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:118:1/1:0:29:2:15:1/1:0:29:0:33:1/1:0:33:./.:4:57:.:.:.
chr12	67011570	HG2_10X_SVrefine210Xhap12_9286	T	AAAGAAATGCATATTAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_12957:HG2_PB_pbsv_13279:HG3_PB_SVrefine2Falcon1Dovetail_8012:HG2_PB_HySA_24136:HG2_PB_assemblyticsfalcon_5769:HG2_PB_SVrefine2Falcon1plusDovetail_2526:HG2_Ill_manta_3680:HG2_10X_SVrefine210Xhap12_9286:HG3_PB_SVrefine2PBcRDovetail_6261:HG4_PB_SVrefine2Falcon1Dovetail_8088;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9286:HG2_Ill_manta_3680:HG2_PB_SVrefine2Falcon1plusDovetail_2526:HG2_PB_assemblyticsfalcon_5769;NumExactMatchSVs=4;ClusterMaxShiftDist=0.216393;ClusterMaxSizeDiff=0.216393;ClusterMaxEditDist=0.245902;PBcalls=8;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=325;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:67011571-67011569;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9908;SizeDiff=-1;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1204.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:31:0|1:27:1:0:37:1|0:0:17:25:0:0/1:34:13:0/1:8:27:.:.:.
chr12	67632877	HG4_Ill_GATKHC_21228	A	AAACTAAAGTTTATTAACTAAACTTTATAAACTAAAGTTTATTAACTAAACTTTAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9581:HG2_PB_pbsv_13281:HG2_PB_PB10Xdip_7625:HG2_PB_PB10Xdip_7624:HG2_Ill_breakscan11_4391:HG2_PB_HySA_24140:HG4_Ill_svaba_16571:HG4_PB_pbsv_13285:HG4_Ill_manta_3122:HG4_Ill_Krunchall_18394:HG4_Ill_GATKHC_21228:HG4_Ill_GATKHCSBGrefine_9163:HG4_Ill_250bpfermikitraw_17550:HG4_Ill_150bpfermikitraw_16887:HG2_Ill_svaba_16510:HG2_Ill_manta_3681:HG2_Ill_SpiralSDKrefine_3617:HG2_Ill_Krunchall_18066:HG2_Ill_GATKHC_21228:HG2_Ill_GATKHCSBGrefine_8887:HG2_Ill_250bpfermikitraw_17725:HG2_Ill_150bpfermikitraw_16686:HG4_PB_HySA_19341:HG4_Ill_SVrefine2DISCOVARDovetail_9458:HG2_PB_SVrefine2Falcon1plusDovetail_2527:HG2_Ill_SVrefine2DISCOVARplusDovetail_2805:HG2_10X_SVrefine210Xhap12_9287:HG2_PB_SVrefine2PBcRplusDovetail_2397;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16686:HG2_Ill_250bpfermikitraw_17725:HG2_Ill_GATKHCSBGrefine_8887:HG2_Ill_GATKHC_21228:HG2_Ill_Krunchall_18066:HG2_Ill_SpiralSDKrefine_3617:HG2_Ill_manta_3681:HG2_Ill_svaba_16510:HG4_Ill_150bpfermikitraw_16887:HG4_Ill_250bpfermikitraw_17550:HG4_Ill_GATKHCSBGrefine_9163:HG4_Ill_GATKHC_21228:HG4_Ill_Krunchall_18394:HG4_Ill_manta_3122:HG4_Ill_svaba_16571;NumExactMatchSVs=15;ClusterMaxShiftDist=0.145455;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.295652;PBcalls=9;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=55;DistBack=-34;DistForward=10470;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=48;REFWIDENED=12:67632864-67632911;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:27:0|1:22:2:3:22:0|1:28:0:0:21:0/1:22:26:./.:.:.:.:.:.
chr12	67678492	HG2_PB_HySA_24141	A	ACACACACACACACACACAAACTTTCTTCAGCCCATGCACACATACACACACACACACTTCAGCCCCCGCCCCCGACACACACACAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9582:HG3_PB_HySA_20002:HG2_PB_HySA_24141:HG3_Ill_GATKHC_21104:HG2_PB_pbsv_13282:HG2_Ill_GATKHC_21229:HG3_PB_pbsv_12960:HG2_PB_PB10Xdip_7626:HG2_PB_SVrefine2PBcRplusDovetail_2398:HG2_PB_SVrefine2Falcon2Bionano_6561;NumClusterSVs=10;ExactMatchIDs=HG2_PB_HySA_24141;NumExactMatchSVs=1;ClusterMaxShiftDist=0.207317;ClusterMaxSizeDiff=0.195122;ClusterMaxEditDist=0.268293;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=-90;DistForward=59;DistMin=-90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=97;REFWIDENED=12:67678486-67678582;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9884;PctRecOverlap=0.977;SizeDiff=1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=98;MatchId=1206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:47:0|1:34:3:3:41:./.:12:38:33:0:0/1:23:8:./.:.:.:.:.:.
chr12	67705312	HG2_Ill_GATKHCSBGrefine_8888	T	TGTTTGAGACAGATTTGTCTCAAACCTTATCTGAGTTAAGTGCTAAAGAGACCTCACCTATAATATGCTGCTCAATAGACCTCACCTAAAATACAATCTGGTGAGGTCTCTTTAGCACTTAACTCAGGTAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4392:HG3_PB_pbsv_12961:HG2_PB_PB10Xdip_7628:HG4_PB_pbsv_13286:HG2_PB_PB10Xdip_7627:HG4_Ill_manta_3123:HG4_Ill_SVrefine2DISCOVARDovetail_9459:HG4_Ill_MetaSV_1131:HG4_Ill_GATKHCSBGrefine_9164:HG4_Ill_Cortex_767:HG4_Ill_150bpfermikitraw_16888:HG3_PB_SVrefine2PBcRDovetail_6262:HG3_PB_SVrefine2Falcon1Dovetail_8013:HG3_Ill_manta_3009:HG3_Ill_SVrefine2DISCOVARDovetail_9587:HG3_Ill_MetaSV_1161:HG3_Ill_GATKHCSBGrefine_8766:HG3_Ill_Cortex_810:HG2_PB_SVrefine2PBcRplusDovetail_2399:HG2_PB_SVrefine2PB10Xhap12_9583:HG2_PB_SVrefine2Falcon2Bionano_6562:HG2_PB_SVrefine2Falcon1plusDovetail_2528:HG2_Ill_manta_3682:HG2_Ill_SVrefine2DISCOVARplusDovetail_2806:HG2_Ill_MetaSV_1060:HG2_Ill_GATKHCSBGrefine_8888:HG2_Ill_Cortex_1872:HG2_10X_SVrefine210Xhap12_9288;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9288:HG2_Ill_Cortex_1872:HG2_Ill_GATKHCSBGrefine_8888:HG2_Ill_MetaSV_1060:HG2_Ill_SVrefine2DISCOVARplusDovetail_2806:HG2_Ill_manta_3682:HG2_PB_SVrefine2Falcon1plusDovetail_2528:HG2_PB_SVrefine2Falcon2Bionano_6562:HG2_PB_SVrefine2PB10Xhap12_9583:HG2_PB_SVrefine2PBcRplusDovetail_2399:HG3_Ill_Cortex_810:HG3_Ill_GATKHCSBGrefine_8766:HG3_Ill_MetaSV_1161:HG3_Ill_SVrefine2DISCOVARDovetail_9587:HG3_Ill_manta_3009:HG3_PB_SVrefine2Falcon1Dovetail_8013:HG3_PB_SVrefine2PBcRDovetail_6262:HG4_Ill_150bpfermikitraw_16888:HG4_Ill_Cortex_767:HG4_Ill_GATKHCSBGrefine_9164:HG4_Ill_MetaSV_1131:HG4_Ill_SVrefine2DISCOVARDovetail_9459:HG4_Ill_manta_3123;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0447761;ClusterMaxEditDist=0.205882;PBcalls=10;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=131;DistBack=10;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=12:67705313-67705331;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:1/1:1:34:1:33:./.:5:43:6:35:./.:2:28:./.:.:.:.:.:.
chr12	70675596	HG4_Ill_150bpfermikitraw_16905	T	TTAAATTTAAACTCATTTAAATTAAATAAATTTAAACTCATTTAAATTAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6565:HG2_PB_SVrefine2PBcRplusDovetail_2405:HG2_PB_PB10Xdip_7642:HG2_PB_pbsv_13293:HG2_PB_PB10Xdip_7643:HG4_PB_pbsv_13297:HG4_Ill_svaba_16587:HG4_Ill_scalpel_12223:HG4_Ill_SVrefine2DISCOVARDovetail_9469:HG4_Ill_Krunchall_18410:HG4_Ill_GATKHC_21245:HG4_Ill_GATKHCSBGrefine_9171:HG4_Ill_FB_11466:HG4_Ill_250bpfermikitraw_17565:HG4_Ill_150bpfermikitraw_16905:HG2_PB_SVrefine2PB10Xhap12_9591:HG2_Ill_svaba_16535:HG2_Ill_SVrefine2DISCOVARplusDovetail_2817:HG2_Ill_Krunchall_18087:HG2_Ill_GATKHC_21250:HG2_Ill_GATKHCSBGrefine_8896:HG2_Ill_FB_11452:HG2_Ill_250bpfermikitraw_17747:HG2_Ill_150bpfermikitraw_16710;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16710:HG2_Ill_250bpfermikitraw_17747:HG2_Ill_FB_11452:HG2_Ill_GATKHCSBGrefine_8896:HG2_Ill_GATKHC_21250:HG2_Ill_Krunchall_18087:HG2_Ill_SVrefine2DISCOVARplusDovetail_2817:HG2_Ill_svaba_16535:HG2_PB_SVrefine2PB10Xhap12_9591:HG4_Ill_150bpfermikitraw_16905:HG4_Ill_250bpfermikitraw_17565:HG4_Ill_FB_11466:HG4_Ill_GATKHCSBGrefine_9171:HG4_Ill_GATKHC_21245:HG4_Ill_Krunchall_18410:HG4_Ill_SVrefine2DISCOVARDovetail_9469:HG4_Ill_scalpel_12223:HG4_Ill_svaba_16587;NumExactMatchSVs=18;ClusterMaxShiftDist=0.257426;ClusterMaxSizeDiff=0.257426;ClusterMaxEditDist=0.268041;PBcalls=7;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=79166;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=57;REFWIDENED=12:70675597-70675653;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1209.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:23:0|1:28:0:1:19:./.:3:9:13:0:0/1:23:28:./.:.:.:.:.:.
chr12	71053961	HG2_PB_SVrefine2Falcon2Bionano_6567	T	AAAATAAATAAATAAATAAATAAATAAGGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCTGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACCCCATGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACACAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGGAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACAAGACAGAAAGTCAACAAGGATACCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAACCGCGCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGAAATTTATAGCACTAAATGCCTACCAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTGGAAGAAATGGATACATTTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGATGCAAGGCTGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACACCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCTGAAAATGGCCATACTGCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACCAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGATCTAATTAACTAAAGAGCTTCTGCACAGCAAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAAACAAATTTACAAGAAAAAAAACAAACAACCCCATCAAAAGTGGGCGAAGACATGACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAGTCAGGAAACACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAAGAAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAAACAATGAGATCACATGGACACAGGAAGGGAATATCACACTCTGGGGACTGTGTGGGGTCGGGGGAGGGGGAGGGATAGCATTGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATTTATACATATGTACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAATGCCATTACATTCTAAATCCCTGTAGCAGCATTTCAGGGAACAGTTTGTCAATATTACTTTCCTTTGTCAAATCCGTGAAATAGCAGTTGATTTCTTAAAATAAATCTCAGCTATAAAATGTTAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6567:HG4_PB_pbsv_13298:HG2_PB_PB10Xdip_7644:HG2_PB_HySA_24163:HG4_PB_SVrefine2Falcon1Dovetail_8097:HG3_PB_SVrefine2Falcon1Dovetail_8022:HG2_PB_SVrefine2PB10Xhap12_9592:HG2_PB_SVrefine2Falcon1plusDovetail_2536;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6567;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0544625;ClusterMaxSizeDiff=0.0544625;ClusterMaxEditDist=0.218701;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=6179;DistBack=1297;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=12:71053962-71053987;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.996;PctRecOverlap=0.9958;SizeDiff=-25;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=99;MatchId=1210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:40:0|1:25:0:0:33:1|0:0:8:23:0:0/1:19:10:0/1:192:637:.:6264:.
chr12	71081095	HG2_Ill_manta_3684	T	TTTATATATATGTTATATATATATAACATATATAACATATAGTTATATATATAACATATAAAACATATAGTTTTATATATATG	20	PASS	ClusterIDs=HG2_PB_pbsv_13294:HG3_PB_pbsv_12976:HG4_PB_pbsv_13299:HG4_Ill_svaba_16589:HG4_Ill_manta_3124:HG4_Ill_Krunchall_18412:HG4_Ill_GATKHC_21248:HG4_Ill_GATKHCSBGrefine_9172:HG4_Ill_250bpfermikitraw_17567:HG4_Ill_150bpfermikitraw_16908:HG3_Ill_svaba_16682:HG3_Ill_manta_3010:HG3_Ill_Spiral_13831:HG3_Ill_Krunchall_17745:HG3_Ill_GATKHC_21138:HG3_Ill_GATKHCSBGrefine_8773:HG3_Ill_250bpfermikitraw_17257:HG3_Ill_150bpfermikitraw_16761:HG2_Ill_svaba_16539:HG2_Ill_manta_3684:HG2_Ill_SpiralSDKrefine_3635:HG2_Ill_Krunchall_18091:HG2_Ill_GATKHC_21255:HG2_Ill_GATKHCSBGrefine_8897:HG2_Ill_250bpfermikitraw_17750:HG2_Ill_150bpfermikitraw_16714:HG2_PB_HySA_24164:HG2_PB_PB10Xdip_7646:HG2_PB_PB10Xdip_7645:HG2_Ill_breakscan11_4393:HG4_Ill_SVrefine2DISCOVARDovetail_9473:HG3_PB_SVrefine2PBcRDovetail_6270:HG3_Ill_SVrefine2DISCOVARDovetail_9600:HG2_PB_SVrefine2PBcRplusDovetail_2406:HG2_PB_SVrefine2PB10Xhap12_9593:HG2_PB_SVrefine2Falcon2Bionano_6568:HG2_PB_SVrefine2Falcon1plusDovetail_2537:HG2_Ill_SVrefine2DISCOVARplusDovetail_2819:HG2_10X_SVrefine210Xhap12_9293;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16714:HG2_Ill_250bpfermikitraw_17750:HG2_Ill_GATKHCSBGrefine_8897:HG2_Ill_GATKHC_21255:HG2_Ill_Krunchall_18091:HG2_Ill_SpiralSDKrefine_3635:HG2_Ill_manta_3684:HG2_Ill_svaba_16539:HG3_Ill_150bpfermikitraw_16761:HG3_Ill_250bpfermikitraw_17257:HG3_Ill_GATKHCSBGrefine_8773:HG3_Ill_GATKHC_21138:HG3_Ill_Krunchall_17745:HG3_Ill_Spiral_13831:HG3_Ill_manta_3010:HG3_Ill_svaba_16682:HG4_Ill_150bpfermikitraw_16908:HG4_Ill_250bpfermikitraw_17567:HG4_Ill_GATKHCSBGrefine_9172:HG4_Ill_GATKHC_21248:HG4_Ill_Krunchall_18412:HG4_Ill_manta_3124:HG4_Ill_svaba_16589;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0595238;ClusterMaxSizeDiff=0.0591716;ClusterMaxEditDist=0.265896;PBcalls=11;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=82;DistBack=1;DistForward=21;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=27;REFWIDENED=12:71081091-71081117;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:27:0:25:1/1:0:25:1:26:1/1:0:54:./.:.:.:.:.:.
chr12	71339049	HG2_PB_SVrefine2PB10Xhap12_9594	TATCAAAGGTTGTTTGA	AGGGTGTGTGTACACTCCTGGATATATTGGGAGTAATATATTTTCACTTCCTGAATATTAGAAACAATATCACGGGGGGGGGTGTCTACCTTCTGCAATATTGGGAGTAAGATCATCTCTCCACCTGGATATTAGGAACAATATCACAGGAGGGGTGTACACGCCCTGTGATGTTTTGAGTTATATAATCCTCTCCCCACCTGGATATTAGATACAATATCACAGGGGTTGCACACCCCTTGCGATCTTGGGTGTAACATTATTCTCTCTCCTCCTTAACATTAGGAACAATATCACAGGGGGAGTGTACATTTTCTGCGATATTGACGGTAATATCATCGTCTCTTCTCCTGGATATTAGGAACAATATCTCAAGGAAAGTGTACACCTACTGTGATACTGAAAGTAATACTATTCTCTCCTCTGTTAGATATTAGGAACAATATCACAGAACGGGTGTACACCAACTGCGCTATTGGGAGTAATATCATCCTCTCCCCTCGTGGATGTTAGGAACAATATCACCAGGGGGATGTACACCCCCTGATATATTGGGAGTAATATCATCTACTCCCCCCTGGGTATTACGAACAATATCACTGGGAATGTACACCCCCTGTGATATCTTGAGTAATATAATTCTTTCTCCCCCTAGATATTAGGAACAAAATATTACAAGGGGGGTGTACAACCCCTGCAATATTGAGGTAATATTATTTTCTCCCCACCCGGATATTAGAAACAATATTAAAGAAAGAGTGTACACCCTCTGTGACATTGGCTGTAATATCACACACTGTGATATTAGGAGGGTAATACCTCTCCAGAATATTACAAATAATATTCCAGGGTGTACTCACATGGTATACACACACTGTGATATTAGGAGATGTATATCTCTCCAGAATATTTTTAATAATATCCCATGTCGTATACACATGGTGTACACTCATTTTCATATTAGGAGTGTAATATCTCCCTATGATATTACAAATAACATCCCAGAGTGTACACACATGGTGTAAACCCACTGTGATATTAGGAGAGTAATATTTCCCCAGGATATTATGAATAATATTCCAGGGTGTACAAACATGGTGAACACCTACTTTGATATTAGGAGAGTCATATCTCCCCAGGATATTATGAATAATATCCTAGGTTGTACAAACAAGGTGTAAACCCACTGTGATATTAGGAGAGTAACATCTCCCCAAAATATTATGAATAATATTCCAGGGTGTAAACACATAATGTACACCCTCTGTGATATTAGGAGAGTAATATATTCTAGGTTGTATGCAAATGTTGTACAACCATTGTGGTATTAGAAAAGTTATATCTCCCCAGGATATTACAAATAATATCCAAGGTGTATGCACATGGTGTACATCCAATGTAATATTAGGAGAATAATATTTCCCCCGGATATTACGAACAATATCCCAGGGTATACACACGTGGTGTAAACTGACTGTGATATTAGGAATCATATCAGGACATTACGAATAATATCCCAGGGTGTACCCATATGGTGTATATCCACTGTGATATAAGGAATACTATGCAGCCATAAAAAAGGTTGAGTTCATGTCCTTTGTAGGGACATGGAAGAAGCTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAATCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACTTAGACACAGGAAGGGGAACATCACACACTGGGGCCTGTCATGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGTGCATGTATACATATGTAACAAACCTGCAGGTTGTGCACATGTACCCTAGAACTTAAAGTATAATAATAAAAAAAAGTAATATCTCCCCAGGATATTATGAATAATATCCCAGGGTGTACACACATGGTGTACACCAGCTGTGATATAAAAAGTAGTATCTTCCCAGGATATTATGAACAATATCTCAGGGTGAACACCCACTGTGGTATAAGGAGTAATATCTTCCTAGGATATAACCAATAATATATTCGGTGTACACCCACTGGGATATTAGAAGTAATATCCTTCCAGGATATTACAAATAATATCCCAGAGTGTATACCCACTGTGATATCAGGAGTAATATCTCCCCAGGATATTACAAATAATATCCAAGGGTGTCAATTCACCATGATATCAGTAGTAATATCTCTGCAAGATGTTACAAATAATATACAAAGTTGTACACCCACTGTAATATTAAGAGTAATGTCTCCCCAGAATATTACGAATAATATCCCAGGGTTGACATCCTCTGTTATATCAGGAGTAATATCTGCCTAAGATATTACAAATAATATTTCAGTGTGTACACACAGCGTGTACACCCACTGTGATATTAGGAGTAATATCTCCCCAGGATATTACAAATAATATCACAGGGTGTAAACCCACTGTGACATTAGAAGTAACATCCCCCTATTATAATACGAATAATATCACAGGGTGTACACACGTGGTGTACACTCACTGTCACATTAGAACTGACATCCCCCTATAATATTACGATTAATATCACAGGGTGTACACACATGGTGTACACCCACTGTGACATTAGATGTAACATCCCCCTAGGATATTACAAATAATATCACAGGTTGTACACACATTGTGTAACCCACTGTGAAATCAGCAGTAACATTTCCCTAGGATATTATGAATAATATCCCTGGTGGTTTACACACATGGGGTGTACCCCCTGTGACATTAGCATTAACATCACTTTAGGATATTACGAATAATATCTCAGGGTGTACATCCTCTGTGACATTCAAAGTAACATCCCCCTAAGGTATTACAAATAATATCACAGGGTGTACACCCCCTGTGACATGAGGAGTAACATATTTTAGGATATTATGAATAATATCGCAAAATGTACACCCCCTGTGACATTAGGAGAAACATCCCCATAACATATTATGAATAATACCACAGGGAGTACACCCCCATGATATTAGAAGTAACATCCCTGTAGGATTATGAATAATATAACAGGGTGTACAACCATTGTGACATTAGTAGTAACATTCTCCTAGGATATTACGAATAATATCACAGGGTGTACACATTAGGAGTAAAATGAATCCTAGGATATTACAAATAATATCACAGGGTGCATACCCCCTTTGACATTAGGGGTAATATCCCCCTAGAATATTATGAATAATATCAAAGGGTGTACATCCCCAGTGACATTAAAAGTAACACCCCGCCTAGGATATTACCAAAAATATCACAGGATGGACATCCACTGTGAAATTAGGAGTAACATCCCCCTAGGATATTACAAGTAATATCACAGTGTGTACACCCACTATAATATTAGGAGTAATATAGTCCTGGAATATTACAAATAATATCACAGAATATACACCCACTGTGATATTAGGAGTAATATCTCCCTTAGACATTACAAATAATGTCACAGAGTGTACACATATGCTATACATTCACTGTATTATTAGAAGTAATATCTCCCTAAAATATTATGAAAATATCACAAGGTGTACACCCACTGTGATATTAGAAGTAATAACTACCTAGGATATTATGAATATCACAGTGGGTGTACACACATGGTGTGTGTATACACACATGGTATATGCCCACTGTGATATTAAGAGTTATAGCTTCCTAAACTATTATGAATAATATCACAAAGTGTACACGATGTATGTACACCCATTGTTATATTTGAAGTAATATCTTTTTAGAATATTACAAATAATATCACAAGGTGTGCACCCCCGTGCCATTAAAAGCAACAAACTTCTAGAAAATTACAAGTAATATCGAAAGGAGTATACCCCTTGTGACATCATAAGTAGTATCACTCAAAGATATTACAAATAATATTCAAGGAAGTACAACTCCTTTGGCATTGGGAGTAACATCACCCTAGGATATTACGAATAATATCACAGGGTGTACACCCATTGTGACATTAAGAGTAACATCCCCCTAGGATATTACCAGTCATATCACAGGGTGTACACGCTCTTTGACATCATAATTAACATCCATCTAGGATATTAAGAATCATATCACAGAATGTACACCCCCTGTGACATTAGTAGTAACATCACCCTAGAAAATAACGAATAATATCACTGGTTATATATCACCTGTGACATTAGGAGTAACATTTTCCTAGGATATTACCAAGAATATCACAAGGTGTACACACACTGTGAAATAGGGCATAATATCCCCCTAGAATATTACTGCTAATATCACAGGTAGTACACCCACTGTGATATTAGGAGTCACATCTCCCTAGGATAGTACGAATAATATCACAGGGTCTATACCAACTGTGATATTAGAAGGAATATCTCCCTAGAATATTACGAATAATATAAGAGGTTATACACACAGGCTGTACAACCGCTGTGATATTAGGATTAAATCCCCCTGAAATACAACGAATATTATTACAGGGTGTACACCATATGTGTACACCCACTGTGACATTAGAGGTAACATCTCCCCATAATTAAACGAATAATATCACAGGGCATACACACAAGGTGTACACTTATGTGAAATTAGGAATAACATCCCCCTAGGATTTTATGAATAATAACACGGGTTGAAAACATATGGTGTACACCGACTGTGACATTAGGAGTAACATCCCCCTAGGATATTACAAATAATATCACAGGGTGTACACATGGTGCACACCCACTGTGACAATAGGAGTAATATTTTCCTATAACATTATGAATAATATCACAGGGTGTACACACATGGTGTACTCGCACAGCGTCATTAGGTAGATCATCCTCCTAGAATATTACCAATAATATCACAGGGTGTATACCAACTGTGACATTAAATGTAACATCTCGCCAGGTATTACAAGTAATATCACCCTCTCCCCTCCTGACTATTATGAACCATATCACAGTGGGGTGTATGCCTCCTGCGACATGGGGAGTAATATCACCCTCTCCCCCCCTGGATATTACAAACTATATCACAGGGGGGTGTATGCCCCCCGAGATACGGAAAGTAATATCACCCTCTCCCACCAAGATATTACGAACCGTATCATGGGCGGGGGGTGTACACCCCCCGTGATATGGGGAGTAATATCACCTTTTTCCCCCCTGGATATTGCAAACCATATGACCCTCTCCCCCGATGGATATCATGAACCTTATCACAGGGGGTGTACACACATGGTATTTACTCTATTTGCAGCAGTATTATCTCCCTTCCTGCATATTATAAACAATATCACAAAGAAGTATACACCCCCTGAGATATTGGGAGTAATATCATCCTCTCCCTCCCTGTATAGTAGAAATAATGTCATAGGGGGTGTGTACATTTCCTGAGATATTGGCAGTATAACATTCTCTCCTCCCTGAATATTAAGAACAATATTACACAAGAGGTGTACATCTCCCGTGATATTGGGATTAATATCCTGTTTTCCCTTGGATATTATGATCCATATCACAGGGGAATGTATAACTTCTGCAATATTGCGAGTGATATCATCCTCTCCCTCAATGGATCTTACAAACAATATCACAGGGGAGGTGTACATTTCCTGCGATATGGGGAGTAATATCATCCTTTCGCCCTGTCGATATTAGGAGCAATATCACAGAGGTTGTGTACACCCCCTGCGATAATGGGAGTAATATCATCCCTCCCCCCCCTCCATATTAGGCACAATATTATGGAGGGGGGAAGCCCTGCGATATTGGGGGTAATATTATCCTTTACCTTTCTGGAAATTAGAAATAATATCACAGCATGGGCGTACTCCCCTTGCGGTATTGTGATGAACATCAAACCCTTTCCCTTGGATATTAGGAACAATATCACAAAATTGGTGTACACCCCCTGCGATAATGGAAGTACTATTATCCTCTCCCTGCCTAAATATTAGGAACAATATCACAGGGGAGGTTTACACCTTTTGCGATATTGTTAGTAATATCATCCTCACACCTGGATATTAGGAACCATATCATCGGGAGGTTTACACTTTTTGTGATACTTGGAATAGTATCCTCTTCTCTCCTGAATATTAGGAACAAAATCACAGGAAAGGTGTACACCCCTTGGAATATTAGAAGTAATAGTCCCACTCCTGGATATTAGAAACAATATTACAGAGGGTTAGAACCCCTTCGATATTGAGAGTAATATCATTCTCTCTTCTTTTATTTTATGAACAATATCACAAGGAGGGTATACACTCCCTGCAATATTAGGAATAATATAATTTTATTCTATTCTGGATATTAGAAACAATATCATGTGGGGGTGTTCACCCCCTGCGATATTGGGAGTAATATCATCCTCTACCCACCTTGATATTAGGAACAATATCACAGGAAGGGTGTACACCCCCTGCGATACTGAGAGTATTATTTTCTAATCTCCTGTATATTAGGAACAATATCACGGTGGGGGTGTACACCCCTTGCGATATTGGGAGTAATATCATCCTCACCCTTGAAACATTAGAAAGAATGTCACAGAAGGGGAGTATGCCCTTTGCGGTAATAGAAATGATATCATCCTCACCCTTCCTGAACATTAGGAACAATATCAAAGTGGGGGGTGTGTATCCCCTACGATATTGGGAGTAACATCATCTTCTTTCCTTCTAGATATAAAGAACAATATCACAGGGGGAGCGTACAGTTCCTGAGATATTGAGAGTAACATCATCCTCTCCTCCCCTGGATATTAGGAACAATATCACAGGGTGGGTATACACCCACTGCGATATTGGTAGTAATATTAACCTCTCCCCTTCTGGATACTAAAAACAATATCATGGGGGGGTGTACACATGCTGGGATATTGAGAGTAATATCATCCTTTTTCTCCCTTGATATTAGGAACAATATCACAGGAGGTGTGTACACACTCAGCGATATTGGGAGTAATATCATCCTCTCCCTCCCTGGATACTAAAAACAATCTCAGTGTTAGGGTGTACACCTTCTGTGATATTGAGAGTAATGTCATCCTGTCTTTCCCTGGATATTAAAAACAACATCACAGGTGGGGTGTACACCCCCTGTGATATTGAAAATAATATCATCCTCTCTTTACCTAAACATTAGAAACAATATCACAGGATGGGTGTACACGCCTTGCGATATTGGGAGTAATATCATTCACTTCCCACCTGGATATTAGCAACAATATCACAGGGGGAGTGTACACGCTCCGCAATATTGGGAGTAATATTTTCTTCCCCCCGCCCTGAATACTAGGAACAATATTAAAGAGAAAGTGTATACTTCCTGTGATATTCTCTTCATCTAGATATTATGAGCAATATCACAGGGAGGATGTACACCAGCGGCAATATTGGGAGCAATATTATCCTCTTTCCCCCTGCATATTATGAACAACATCACATGGGGCGTGTACACACCTTTCCATGTTGGGAGTAATATCATCCCCTCCCTTTCTGTATATTAGGAACAACATCACTGTGGGGGGTGTACAACCCCTGTGATATTATGAGTATTATTTTTCTCTCCCACCTGGATATTAGGAACAAAATTACACAGGGGGTGTACACCCCCTGCCATATTGGGAGGAATATCATCCTCTCCCTTTTTGTATATAGAAAAAAATCACAGGTGGGGGGTTGGTGTGCAGCCCCTGCGATAATGGGAATAATATCATGCTCTTTCCCCCTGGATATTAGGAACAATATTACAGGAAGGGTGTACACTCTATGCGATATTAAAACTAATACCATCCTTTCCCCTTCTAGGTATTAGAAACAATATCACAGGGAGGGGTGTACACCCACTGCAATATTGGGAGTAATATAATCCTCTCCCCTCCCCGGATATTAGGAACAATACCACAGTGCATGTGTATGCCTTGTGTGATATTGAGAGTAATACCATCCTTTCCCTCACTAAATATTAGGAACAATATCACAGGGGGAGTGTACATCCTGTGCGATATTGGGAGCAATATCATCTTCTCACCCTCTAGGTTTAGAAACAATATTACATGGTGGGTGTACACCTGCTGCAATATTGGGAGTAATATCCTCTCTCCCTTTTGATACTAAGAACAATATCACAGTGGGGGGTGTAAACATCCTGTGATATTGAGAGTAATATCATCCTCTCCCTCCTGGATATGAGAAACAATATCACAGAAGGAGTGTACACCTCCTGCGATATTGGGAGTAATATTATCCTCTACCTCCCAGATATTAGGAACAATATCACAGTGGGGTTGTACATCCCCTGTGATATTGGGAGTAATATCATATGTTCCCTCACTAAATATTAGGAACAATATCACAGGGGGTGTGCACACATCCTGCGATGTTGAGAGTAATATCATTTTCTTACCCCCTGGATTTAGAAACAATATCACAGGGGGTTATACAGCTGCTACAATATTGGGAATAATATCACCATTTTCCCTTCTGGATATGAGGAAGAATATCACAGGGGAGGTGTACATGCCCTGCAATATTGGGAGTAATATTATCCTCTATCACCCTGGATGTTAGAAAAAATATCACAGCGAGGGTGTACGTCTCCTGCAATATTGTGAGTAATATCATCCTCTCCCCCCACTTGAATATTAGAAACAATATCACATGAGGGGTATACAGTCCCTATGATATTGGGCGTAATATCATCTTTTATACCCATGGATATTAGGAACAATATCACAGGGGAAGTGTACACCCACTGTGGTATTGGGAGTAATATCATCCCCTTAATCCTGGATATTAGGAACAATATCTTAGGGAGGGTGAATACGCCTCGCAATATGAGGAGTACTATAATCTTCTCTCCCGTTGGATATTAGGAATAATATTACAGGGGTGTTTTACACCCCCTGCGATACTGGGAGTAATGTCATCCTCTCCCTGGATATTAGGAACAATATCACAAAGGGGGTGGACTCTTCCTGTGATGTTGGGAATAATATGCTCTCCCCTCATTGATATTAGGAACAATTCACAGGGGAGGTGTTCACCCCCTGCGGTATTGAGTGTAGCATCATAATCTCCTTCCTGGATATTAAAAACAATATCACAGAAGGGGTGTAGACCCCCTGCGATATTGGGAGTAATATCATCCTTTTCTTACCTGGATATTAGGAACAATATCACAGGGAAGGTGTACACCCCCTGCAATATTAGAAGTAATATCATTCTCCCCACCCCTGGACATTAGGGACAATATGACATGCGAGGTAAACCCCTCTGCTAAAATGGGAATTATATTATATTCTTGCCCTCTAAATATTAGGAACAATATCACAGAGGGAGTGTACATTACCTGCCATATTGAGGGTAATTTCATCCTTTTTCCCATGAATGTTAGTACAATATCACGAGTGGTGTACAGCACCTGCGATATTGGGAGTAATATCACCCTCTTTCCCCCTGGACATTAGGAACAATATTACAGGGGATTTGTACACTTACTGTGATATTGAAATAATGTGATCGTCTCCACACGTGGATATTAGAAATAATATATCAGGGTGTTGTACACCTCATGTGATATTGGGAATAATATCATACTCCCCCTCCCTTGATATTAGGAACAATATCACCAAGGGGGTTACACTTCCTGTGATATTGGGAATAATAGCATCCTTTCTCTTCCTGGATATTATGAACAATATCATAAAAGTGGTGTGCACCTCATGCGATATTGGGTGTATATCATCCTCTACCTACCAGGGTATTAAAAGTAACAAACTTCTAGAAAATTACGAATAATATCACAAGGTGTACATCCCCTGTGACATTATAAGTAATATAATCCAAGGATATTACAAATAATATCGCAGGGAGTACAACCCCTGTGACATTGGGAGCCTCACCCTAGGATATTACGAATAACATCACAGGGTGTACACCCATTGTGTCATTAGGAGTAATATCTTCCTAGGATATTACCAGTAATATCACAGGGTGTACACCCTCTGTAACATTAGGAGTAACATCAACCTAGGGTATTAAGAATAATATTACAGAATGTACACCCGCTGTGACATTAGGAGTAACATCCCCTAGGATATTACAAATAATATCACAGGGTGTACACCCCCTGTGACATTAAGAGTAACATCACCCTAGAATATTGCGAATAATATCACAGATTATACATCACCTGTGACATTAGGAGTAACATTCCCCTAGGATATTACAAATAATATCACAGGGTGTACACACACTGTGACATTAGGCATAATGTCCCCTAGGATATTACTGATAATATCACAGGTTGTATACCCACTGTGATATTTGGAGTAATATCTCCCTAGGATATTATGAATAATATCACAGTTTGTACACACAGGCTGTATGACCACTGTGATATTAGGAGTAGAATCCCCCCCAAATATTACGCATATTATCACAGGGTGTACACATATGGTGTACATCCACTGTGACATTAGAAGTAACGTCCCCCTATAACACACATGGTGTACAGTTACTGTGAAATTAGGAGTAACATCCCACCAGGATTTTACAAATAATACCACAGGGTGAACACACATGGTGTACACTAACTGTGACATTTGGAGTAACATCCCCCTAGGATATTACAAATAATATCACAGACAGTATACACATAGTGTACACCCACTGTGACATTAGGAGTAACATCCCCCTAGGTAGGATATTACTAGTAAGATCACAGGGTGTACAAACATGGTGTACACCCATTGTGACATTAGGAGTAACATTTTCCTAGAATATTATGAATAATGTCACAGGGTGCATACACCTGGTGCACACCCACTGTGATATTAGGTATAAACCCCCCTAAGATATTACAAATAATATCACAGGGTGTACATTCACTGTAACATTAAATGTAACATCTCAAACAAAGCCGCCAAGAAGTTCAAACTTGGTGGAGCCCACCGCAGCTCAGCAAGGTCGCTACATCCCTGAGTATCTGGGATTACAGGTGCCTGCCACCACACCTGGCTAATTTTTTTTATTTTTAGTAAAGATGTGTTTTCACCATATTTGCCAGGCTCCTCTTGAACCCCTGAGCTCAAGCAATCTGCCTGCCTCAGCCTCCAATAAATTCTGGGATTACAGGTTTGAGACTACCTCTCTAGGTTCCCTCCTCTCTGGGCGGGGCATTTCTGAAAAAAAGGCAGCAGCCCCAGTCAGGGACTTATAGATAAAAGCCCCAAGTCCCTGGGACAAAGCAGGGAGCCGTGGCTTATGCCTATAATTTCAGCACATTGGCAGGCCAAGGCGGGTGGATCACCTGAGGTCAGGAGTTCATGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCTGGAGAATCCCTTAGAACCTGAGAGGCGGAGGTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGTCTGGGTGACAGAGCGAGACTCTGTCTCAAACAAAAAACAAACAAACAAACAAAACTATCTTAATCTACTCCTATATCCTAACCTTGAAAGCATCAGAAATGAATTTACTAAACAATTTTTTTTTTTTTGAGACAGAGTATTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAGCCTCTGCCTCCCAGGTTCCAGTGATTCTTGTGCCTCAGCCACCTGAGTATCTGGGATTACAGGTGCCTGCCACTACACCTGGCTAATTTTTGTAGTTTTAGTAAAGATGTGTTTTCACCATATTTGCCAGGCTCGTCTTGAACCCCTGAGCTCAAGCAATCTGCCTGCCTCAGCCTCCATAAATTCTGGGATTACAGGTTTGAGCTTCCATGCCTGGAATACTAAACACTTTTCAAATTGGATAATAAGATATAGTCATGAGGAGCTCAAAATTCAAGTCATGCTCCTCCATGTATCCTTAGCAATGTTCAAAATATCTCTCAGTTCAGATCAGGAAACACTTGCTGAGCACTCACTACATGTCGGGTACCATGCTAGGCACTAGGGATAGAAGAGAGAAATAAAAGAATAAAATAGGGAGGTAGGTCTCAAAGAGCTTATATATTTGTGGATAAGATGGCATATAATACTGTAAGAAAGAAAAATGACATGGATATACAATGGGTATTTTATAAGTACTGAGTAGCACTTAGTCCATCTTTGGATTAATGTACATATCCCAGACGAAAATGACACCTTGAAGGATGAGTAAGTTAGCCAACAAAAGAAATATGCATGTCTCTCTTCAATTAAAGTGAACGAATGACACAAAAAGCTAAAAAAGTAATATATTTATTAAAGTATAAAATATAAGATTGAGAATGAGGTTAAAAGGCAAACTATGTCAGGATATAAAGGTATTTATGTGTTACCCTAAGGAACTTAAATTAAATCATCTCAATGTTAATGGGAAGTCTCTAAGTGTTTCAAGGACTAGAGTGATAGGAAGACCAGGTATATGTTGTAGAGAGACCCCTTTGGTTGGTGTTTAGAAAATTGATTATGAGATTGCAGCAATACTGAAGTAAGAGAAAACAGATAGTAAGCAACTGAAATTCTGTGGCCAAATGATCAAGGCCTCAACTTGGTTAGTAAAAACTAATTATGGAGAAGAATAGGAAGGGAGTACATGCTAGAACGTTTAGAAGATAAAGTTGGCATGACTTGGTGATAGATCAGATAAAAGATATGTAGGAGAAGGATAATTCAAGAATGATTTCCATTTTCCTGGAGAAGATGAGACCACCAACTAGAAGAATCAGTGTGGAAGGTGTGGAGATAATGTATTCTGTTTTTGTTATACTGAATTTGAGTACTGTGAAATGCAGGTGTCCCAATGTATTTAGATTTATATGTCTGAATCACAGTGTAGAAGTTATAACTGAAGACAAATGTATATAGCTGGAAGATAGAGACATCAGAAGGGATCACATAACCCAATAGCTGTGAGTGACAAGAAGAAAGCAATGGGCTAGATATTGAAGTCTGAGGATTATCAAAGACAGGGGAGCAGATAAGGCAGGCTCTACCTGTCATAAAGACAAGATGGCAAGATAAGTTTCAAGACCTGGTTGTATCAAAAGGCATGAGAGGCCAACACTGTCCAACACCATAAGACAAGCATTACTTTTTTTTACTTTCTTTTTAAAAAATTTTTTATTATAATACTTTAAGTTCTAGGCTAATGTGCACAACGTGCAGGTTTGTTACATATGTATACATATGCCATGTTGGTGTGCTGCACCCGTTAACATGTCATTTACATTAGGTATATCTCCTAATGTTATCCCTCCCCCCTCCCCCCACCCCCAATAGGCCCTGGTGTGTGATGTTCCCCACCCTGTGTCCAAGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2538:HG2_PB_SVrefine2PBcRplusDovetail_2407:HG4_PB_SVrefine2Falcon1Dovetail_8098:HG4_PB_SVrefine2PBcRDovetail_6648:HG2_10X_SVrefine210Xhap12_9295:HG2_Ill_SVrefine2DISCOVARplusDovetail_2821:HG4_Ill_SVrefine2DISCOVARDovetail_9476:HG2_PB_SVrefine2PB10Xhap12_9594:HG2_PB_SVrefine2Falcon2Bionano_6569:HG3_PB_SVrefine2PBcRDovetail_6271:HG3_Ill_SVrefine2DISCOVARDovetail_9602:HG3_PB_SVrefine2Falcon1Dovetail_8023;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9594:HG4_Ill_SVrefine2DISCOVARDovetail_9476;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00684218;ClusterMaxSizeDiff=0.00684218;ClusterMaxEditDist=0.0124515;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=13470;DistBack=0;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:71339066-71339048;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9987;PctRecOverlap=0.9994;SizeDiff=-17;StartDistance=-16;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:./.:1:5:0:0:./.:0:7:0:0:1/1:0:28:1/1:0:695:.:13410:.
chr12	73580544	HG2_PB_SVrefine2Falcon1plusDovetail_2546	A	ACATTGATTCTTTCTCATCTTTGTGGGCTTATCTATCTTTGATCTTTGAGGTTGATTACCTTTGAATGGGTTTTTTATGAGATCTCTTTTGTTGAATTTGTTGTTGTTTTCTGTTTGTTTTCTTTTAACAGTCAGGCCACTCTTCCACAAGGCTGCTGCAGTTTTCTGGGGATTCACTCCATACCCTTGTTGCCTCATTTTTACCTGTACCTGGACATATCACCAGTGAAGACTGTGAAACAGCAAAGGTGTTAGCCTTTTCCTTCCTCTAGAGGCTTCATCCCAGGGGTTACTGACCTGTTGCTGGCTTAAATCCACCTGTAGGAGGTGGCTGGAGGCCCCTTTAGGAGGTCTCAGCCAGTCAAGAGGAATGGGATGAGCAACACACTTAAAGAAGCAGTCAGGCAGCTTTCCGGTAGAGCAGGTGTGCTGTATTGTGGGGGACACTTCCTTGTCCACACCATTTGGATTCACCAAAGTTGGCAGGCTAGAATGGCTGAGTTAGCCAAACTGCAGAGATACTGGCCACACCACCTGCTGGGAGCTCCATCCCAGGGAGAGATCAGAGCTTGGTCTGTAGAAGCCTGGCTGGAGTGACTGAAGCCCCCATAGGCAGGTCCTACCCAGTGAAGAGAAATGGATCTGCGTCCTGCTTAAAGAAGCAATCTGGCTATGATCTGGCAAGGCAGCTGTGCTGTGTTGTGAGGGACCCTTCATCCATATCATTTGGATTTTCCAAAGCCAGCAGGCTGGAATGGCTGAGTCTATTGAACCACAGAGAGGGCAGCCACCCCTCACCCCAGGAATTTGGTCTCATCTCAGGCAGACTCCAGCCTTTGCCATTGGCTGGCTGGAATTCCAAACCAGTGGTTATTAAATTGTGAGGTGTTTTGAAAGTATGGCATAAAGAATGATGCTGCTTAGCTCCCTGGATTCTTCCATTCTTTTGTGATTTCCAGCATTTCAAGTTCAATGTTTAACTGAAAGCACTATTTCTATCATGTACATTTTTGAAGAAAGTGTCAAAAATAATTTATGTGTTTCTTAGTCTTTCTTCTTTCTGTCCACTAGGATTCTGACTTCATCTCTTCTCTGGACTTCCATTATGAGGAATGTGGAAAGACAAAAAAATAGAAAGGACAAAGGCAAATTCATCAGATTATCACAGAAAAATGGTCAGAGTGAAGGATAAACTGCTTTCTTTTCCAGCATAGCAGTGGGCATAGCAATAAGTTAGAGGGAAGAATTGGGAAATGATGTGGGAAAGTGAGCTCAACTGGGGAAGCAAGGTGAGATTCTCTCAGCAATTTTCAAAGTATAAAGAATAGAGAACAGATATTTTTAATGAGTGACTATGAACAATATACTTGGATTTCTTCTAATGTTATTGAAAAATGAGTGTAATGATTTGATATTTCATCAGTTCTAAGCCTGAAATACATGACCATGGATTTGATAAAGTGATATCTGTCTATCTATCATCTATCTATCATCTATTTATCTATCTATCATCTATCTATCTATTTTCTTTTGAGATGGAGTTTCACTCTTGTCACCCAGGCTGGAGTGCAATGGCATGATCTTGGCTCACTGCAACCTCCACCTCCAGGGTTCATGTGATTCTCCTGCCTCAGTCTCCCGAGTAGCTGGGATTACCGGCATGTATCACCATGTCCAGCTTATTTTGTATTTTTAGTAGATATGAGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGAGGTCTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACTGAATCTGGCCTAAAGTGACATGTTTCAATCAAAGAAGTATGGCTAGATTGCCAGCCAACTCAGCCCTCTCCATGACAAGAAAATAGGCCTTGTAAGAGATGGCAATACATTTTCTAATTGTACGTTAAAAACTAGATTACATTAATTCTTTGCAAAAGGAAAAGATGATAGCTCTAAAAATATGGAATTTTAACTAATTGGCACTATTTATGTTTTAGCATTTACTGGCTCTATTAAAATAGATT	20	PASS	ClusterIDs=HG4_PB_HySA_19374:HG3_PB_pbsv_12988:HG2_PB_PB10Xdip_7664:HG2_PB_PB10Xdip_7663:HG4_Ill_SVrefine2DISCOVARDovetail_9483:HG2_PB_SVrefine2PBcRplusDovetail_2416:HG2_PB_SVrefine2PB10Xhap12_9606:HG2_PB_SVrefine2Falcon2Bionano_6577:HG2_PB_SVrefine2Falcon1plusDovetail_2546:HG2_Ill_SVrefine2DISCOVARplusDovetail_2829:HG2_10X_SVrefine210Xhap12_9304:HG3_PB_SVrefine2PBcRDovetail_6277:HG3_PB_SVrefine2Falcon1Dovetail_8033:HG4_PB_SVrefine2Falcon1Dovetail_8106;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9304:HG2_Ill_SVrefine2DISCOVARplusDovetail_2829:HG2_PB_SVrefine2Falcon1plusDovetail_2546:HG2_PB_SVrefine2Falcon2Bionano_6577:HG2_PB_SVrefine2PB10Xhap12_9606:HG2_PB_SVrefine2PBcRplusDovetail_2416:HG4_Ill_SVrefine2DISCOVARDovetail_9483;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0363108;ClusterMaxSizeDiff=0.0363108;ClusterMaxEditDist=0.135683;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=2036;DistBack=2587;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=186;REFWIDENED=12:73580545-73580730;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1213.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:91:1/1:4:16:0:22:1/1:0:17:0:7:1/1:0:63:./.:15:252:.:1852:.
chr12	74124808	HG3_PB_SVrefine2PBcRDovetail_6279	T	TGATGTAGGTGCAGGAGAATGGCGTGAAGGAGGCGAGGCAGTGAGGAGATGGCCACTGCACTCCAGCTGGCGACAGAGCGAGATGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2419:HG2_PB_pbsv_13304:HG2_PB_HySA_24200:HG3_PB_pbsv_12992:HG2_Ill_breakscan11_4394:HG3_PB_SVrefine2PBcRDovetail_6279:HG2_PB_SVrefine2Falcon1plusDovetail_2549:HG4_PB_SVrefine2Falcon1Dovetail_8108:HG3_PB_SVrefine2Falcon1Dovetail_8034;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_6279;NumExactMatchSVs=1;ClusterMaxShiftDist=0.22973;ClusterMaxSizeDiff=0.22973;ClusterMaxEditDist=0.273973;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=130;DistBack=-10;DistForward=7;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=12:74124809-74124818;PctSeqSimilarity=0.9073;PctSizeSimilarity=0.8228;PctRecOverlap=0.8239;SizeDiff=-28;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=85;MatchId=1214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:32:./.:11:18:10:17:0|1:30:0:1:19:0/1:26:10:./.:.:.:.:.:.
chr12	75931085	HG2_PB_SVrefine2Falcon2Bionano_6585	A	AGAAGATTATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGTGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCATCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4396:HG2_PB_pbsv_13309:HG4_PB_pbsv_13317:HG3_PB_pbsv_12996:HG4_PB_SVrefine2Falcon1Dovetail_8113:HG3_PB_HySA_20078:HG3_Ill_MetaSV_1172:HG4_Ill_MetaSV_1144:HG2_PB_SVrefine2Falcon2Bionano_6585:HG3_PB_SVrefine2Falcon1Dovetail_8039:HG2_Ill_GATKHCSBGrefine_8913:HG3_Ill_GATKHCSBGrefine_8795:HG2_PB_SVrefine2PBcRplusDovetail_2423:HG2_PB_HySA_24216:HG4_PB_HySA_19403;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6585:HG4_Ill_MetaSV_1144;NumExactMatchSVs=2;ClusterMaxShiftDist=0.125984;ClusterMaxSizeDiff=0.122835;ClusterMaxEditDist=0.228209;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=320;DistBack=28839;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=12:75931086-75931101;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:20:28:./.:21:8:1:17:./.:0:2:14:0:0/1:22:11:0/1:3:27:.:.:.
chr12	76249926	HG2_PB_PB10Xdip_7674	G	GTGGTGGTGGGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2552:HG4_PB_HySA_19405:HG3_PB_pbsv_12998:HG3_PB_HySA_20081:HG2_PB_HySA_24218:HG2_Ill_breakscan11_4397:HG2_PB_PB10Xdip_7675:HG2_PB_PB10Xdip_7674:HG4_PB_pbsv_13319:HG2_PB_pbsv_13311;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_7674:HG2_PB_PB10Xdip_7675;NumExactMatchSVs=2;ClusterMaxShiftDist=0.141935;ClusterMaxSizeDiff=0.141935;ClusterMaxEditDist=0.189873;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=12:76249904-76249945;PctSeqSimilarity=0.9934;PctSizeSimilarity=0.9867;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1217.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:./.:0:0:0:0:./.:4:18:8:12:0/1:4:8:./.:.:.:.:.:.
chr12	76510931	HG2_PB_pbsv_13312	T	TGTTGAAGGCCGGCGCGTGTGGGCTCACGCCTGTAATCCAGCACTTTGGGATGCCGAGCGGCGGATCACGAGGTCAGGAGATCGACGACATTCCGCTTAGAATCGGTGGAAACCCCCTGTCTTACTAAAAATACAATAATTAAGGCTGGGTAGTCGTGGGACGCCTGTAGTCCCAGCTACTTGGAGGCTGAGGCAGCTGAGAATGGCGTTGACCCGGGAGGCGGAGCTTGCAGGATGAGCCGAGTGAATCCGCACTGAGGCTCCAGCGGCTGGGCGAAGAGCGTGACTCCGTCTGCAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAGTA	10	PASS	ClusterIDs=HG3_PB_pbsv_12999:HG2_PB_SVrefine2Falcon1plusDovetail_2553:HG4_PB_pbsv_13320:HG4_PB_HySA_19406:HG2_PB_pbsv_13312:HG2_PB_SVrefine2Falcon2Bionano_6587:HG3_PB_SVrefine2Falcon1Dovetail_8042:HG4_PB_SVrefine2Falcon1Dovetail_8116:HG2_PB_HySA_24219;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_13312;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0819423;ClusterMaxSizeDiff=0.0819423;ClusterMaxEditDist=0.264487;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=329;DistBack=40581;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=12:76510932-76510931;PctSeqSimilarity=0.9184;PctSizeSimilarity=0.9818;PctRecOverlap=0.9605;SizeDiff=6;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=95;MatchId=1218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:16:./.:7:12:19:2:./.:28:0:3:5:./.:42:5:0/1:6:4:.:2910:.
chr12	76823043	HG2_Ill_GATKHCSBGrefine_8915	T	TAAAAAGTTCTTTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATTCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCACAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8044:HG2_PB_HySA_24221:HG2_PB_HySA_24220:HG3_PB_pbsv_13001:HG2_Ill_breakscan11_4398:HG4_Ill_MetaSV_1145:HG4_Ill_GATKHCSBGrefine_9193:HG3_Ill_MetaSV_1173:HG3_Ill_GATKHCSBGrefine_8798:HG2_Ill_GATKHCSBGrefine_8915:HG2_PB_SVrefine2Falcon2Bionano_6589:HG2_Ill_manta_3689:HG4_PB_SVrefine2Falcon1Dovetail_8118:HG4_PB_HySA_19410:HG4_PB_pbsv_13322;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8915:HG3_Ill_GATKHCSBGrefine_8798:HG3_Ill_MetaSV_1173;NumExactMatchSVs=3;ClusterMaxShiftDist=0.128926;ClusterMaxSizeDiff=0.128926;ClusterMaxEditDist=0.251572;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=-15;DistForward=-1;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:76823044-76823058;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:40:0|1:36:4:0:31:0|1:31:0:0:9:0/1:22:8:0/1:7:30:.:.:.
chr12	78396937	HG3_PB_pbsv_13009	G	GAGCAATTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGACGGGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAAGTGGCCCGCAAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGTTCACAGCAATTATCCTGCCTTCAGCCTCTCCGAGTAGCTGGGACTACAGGCGCCCGCCAACCTACGCCCGGCTAATTTTGTATTTTTAGTAGAGACGGGTTTCACCTTGTTAGCCCCAGGAATGGTCTCGATCTCCTGACCTCATGATGCCAACCGCCTGAGGCCTCGCAAAAGTGCTGGGATTAACAGCGTGAGCGCCACCGCGCCCGCCACGA	10	PASS	ClusterIDs=HG3_PB_HySA_20096:HG2_PB_pbsv_13320:HG4_PB_SVrefine2Falcon1Dovetail_8123:HG4_PB_pbsv_13329:HG3_PB_pbsv_13009:HG4_PB_HySA_19423:HG3_PB_SVrefine2PBcRDovetail_6290:HG3_PB_SVrefine2Falcon1Dovetail_8050:HG4_PB_SVrefine2PBcRDovetail_6651:HG2_PB_SVrefine2Falcon1plusDovetail_2561;NumClusterSVs=10;ExactMatchIDs=HG3_PB_pbsv_13009;NumExactMatchSVs=1;ClusterMaxShiftDist=0.123308;ClusterMaxSizeDiff=0.123308;ClusterMaxEditDist=0.216058;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=352;DistBack=-11;DistForward=52059;DistMin=-11;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=12:78396934-78396945;PctSeqSimilarity=0.9453;PctSizeSimilarity=0.946;PctRecOverlap=0.9433;SizeDiff=19;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=94;MatchId=1221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:15:1|0:3:10:14:3:0|1:26:0:0:6:0/1:24:7:0/1:6:14:.:.:.
chr12	78999488	HG2_PB_SVrefine2PB10Xhap12_9623	T	TTGGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_7740:HG3_PB_pbsv_13015:HG2_PB_HySA_24247:HG2_PB_pbsv_13323:HG2_PB_SVrefine2Falcon1plusDovetail_2565:HG4_PB_pbsv_13333:HG2_PB_HySA_24246:HG2_PB_SVrefine2Falcon2Bionano_6596:HG3_PB_HySA_20105:HG4_PB_SVrefine2Falcon1Dovetail_8126:HG3_PB_SVrefine2Falcon1Dovetail_8053:HG2_PB_SVrefine2PBcRplusDovetail_2431:HG2_PB_SVrefine2PB10Xhap12_9623:HG3_PB_SVrefine2PBcRDovetail_6293:HG2_10X_SVrefine210Xhap12_9323:HG2_Ill_breakscan11_4400:HG4_PB_HySA_19437:HG2_PB_PB10Xdip_7741;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9623:HG2_PB_SVrefine2PBcRplusDovetail_2431;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0602219;ClusterMaxEditDist=0.209553;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=310;DistBack=15612;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=12:78999489-78999500;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9936;PctRecOverlap=0.9936;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:78:1/1:3:38:1:26:./.:0:4:0:6:1/1:0:16:1/1:2:52:.:.:.
chr12	79019919	HG2_Ill_Krunchall_18169	T	TTATATATTATATATTATATAATACGTATTATATAATATATAATATATAATACGTATTA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_7742:HG3_Ill_scalpel_12826:HG2_PB_HySA_24248:HG4_Ill_scalpel_12276:HG4_PB_HySA_19440:HG4_Ill_Krunchall_18490:HG4_Ill_GATKHC_21340:HG4_Ill_GATKHCSBGrefine_9208:HG4_Ill_250bpfermikitraw_17641:HG4_Ill_150bpfermikitraw_16978:HG3_Ill_svaba_16757:HG3_Ill_scalpel_12825:HG3_Ill_manta_3021:HG3_Ill_Spiral_13892:HG3_Ill_GATKHC_21223:HG3_Ill_GATKHCSBGrefine_8812:HG3_Ill_150bpfermikitraw_16838:HG2_Ill_scalpel_12580:HG2_Ill_manta_3694:HG2_Ill_Krunchall_18169:HG2_Ill_GATKHC_21347:HG2_Ill_GATKHCSBGrefine_8925:HG2_Ill_250bpfermikitraw_17832:HG2_Ill_150bpfermikitraw_16789:HG2_Ill_breakscan11_4401:HG2_PB_PB10Xdip_7743;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16789:HG2_Ill_250bpfermikitraw_17832:HG2_Ill_GATKHCSBGrefine_8925:HG2_Ill_GATKHC_21347:HG2_Ill_Krunchall_18169:HG2_Ill_manta_3694:HG2_Ill_scalpel_12580:HG3_Ill_150bpfermikitraw_16838:HG3_Ill_GATKHCSBGrefine_8812:HG3_Ill_GATKHC_21223:HG3_Ill_Spiral_13892:HG3_Ill_manta_3021:HG3_Ill_scalpel_12825:HG3_Ill_svaba_16757:HG4_Ill_150bpfermikitraw_16978:HG4_Ill_250bpfermikitraw_17641:HG4_Ill_GATKHCSBGrefine_9208:HG4_Ill_GATKHC_21340:HG4_Ill_Krunchall_18490:HG4_Ill_scalpel_12276;NumExactMatchSVs=20;ClusterMaxShiftDist=0.134454;ClusterMaxSizeDiff=0.113821;ClusterMaxEditDist=0.238095;PBcalls=4;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=-1;DistForward=23;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=13;REFWIDENED=12:79019918-79019933;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:67:1/1:5:37:4:13:./.:0:6:1:8:1/1:1:48:./.:.:.:.:.:.
chr12	80383078	HG4_PB_SVrefine2Falcon1Dovetail_8133	A	AAGGTTTTTAAGCAGAGGAAGCTGCCACTTTCTGGGTCATTACCACCTCTCCCTCATGCTCTCTAACCCCACCTAAGCAGTATATTACATGAACTTTTTATCTCCCACTACTATTCCT	20	PASS	ClusterIDs=HG2_PB_HySA_24264:HG4_PB_pbsv_13344:HG4_Ill_SVrefine2DISCOVARDovetail_9511:HG3_PB_SVrefine2Falcon1Dovetail_8060:HG2_PB_SVrefine2PB10Xhap12_9625:HG2_10X_SVrefine210Xhap12_9327:HG2_PB_PB10Xdip_7751:HG2_PB_PB10Xdip_7750:HG2_Ill_breakscan11_4403:HG2_PB_HySA_24265:HG4_PB_assemblyticsfalcon_5797:HG4_PB_SVrefine2PBcRDovetail_6661:HG4_PB_SVrefine2Falcon1Dovetail_8133:HG4_Ill_svaba_16676:HG4_Ill_manta_3137:HG4_Ill_MetaSV_1150:HG4_Ill_GATKHCSBGrefine_9214:HG4_Ill_Cortex_779:HG4_Ill_250bpfermikitraw_17654:HG4_Ill_150bpfermikitraw_16992:HG3_PB_assemblyticsfalcon_5877:HG3_PB_SVrefine2PBcRDovetail_6299:HG3_Ill_svaba_16764:HG3_Ill_manta_3024:HG3_Ill_Spiral_13901:HG3_Ill_SVrefine2DISCOVARDovetail_9645:HG3_Ill_MetaSV_1181:HG3_Ill_GATKHCSBGrefine_8817:HG3_Ill_Cortex_824:HG3_Ill_250bpfermikitraw_17344:HG3_Ill_150bpfermikitraw_16849:HG2_PB_SVrefine2PBcRplusDovetail_2433:HG2_PB_SVrefine2Falcon2Bionano_6600:HG2_PB_SVrefine2Falcon1plusDovetail_2567:HG2_Ill_svaba_16621:HG2_Ill_manta_3698:HG2_Ill_SpiralSDKrefine_3694:HG2_Ill_SVrefine2DISCOVARplusDovetail_2861:HG2_Ill_MetaSV_1072:HG2_Ill_GATKHCSBGrefine_8930:HG2_Ill_Cortex_1893:HG2_Ill_250bpfermikitraw_17842:HG2_Ill_150bpfermikitraw_16799:HG2_PB_pbsv_13328:HG3_PB_pbsv_13021;NumClusterSVs=45;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16799:HG2_Ill_250bpfermikitraw_17842:HG2_Ill_Cortex_1893:HG2_Ill_GATKHCSBGrefine_8930:HG2_Ill_MetaSV_1072:HG2_Ill_SVrefine2DISCOVARplusDovetail_2861:HG2_Ill_SpiralSDKrefine_3694:HG2_Ill_manta_3698:HG2_Ill_svaba_16621:HG2_PB_SVrefine2Falcon1plusDovetail_2567:HG2_PB_SVrefine2Falcon2Bionano_6600:HG2_PB_SVrefine2PBcRplusDovetail_2433:HG3_Ill_150bpfermikitraw_16849:HG3_Ill_250bpfermikitraw_17344:HG3_Ill_Cortex_824:HG3_Ill_GATKHCSBGrefine_8817:HG3_Ill_MetaSV_1181:HG3_Ill_SVrefine2DISCOVARDovetail_9645:HG3_Ill_Spiral_13901:HG3_Ill_manta_3024:HG3_Ill_svaba_16764:HG3_PB_SVrefine2PBcRDovetail_6299:HG3_PB_assemblyticsfalcon_5877:HG4_Ill_150bpfermikitraw_16992:HG4_Ill_250bpfermikitraw_17654:HG4_Ill_Cortex_779:HG4_Ill_GATKHCSBGrefine_9214:HG4_Ill_MetaSV_1150:HG4_Ill_manta_3137:HG4_Ill_svaba_16676:HG4_PB_SVrefine2Falcon1Dovetail_8133:HG4_PB_SVrefine2PBcRDovetail_6661:HG4_PB_assemblyticsfalcon_5797;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0829876;ClusterMaxSizeDiff=0.0661157;ClusterMaxEditDist=0.232932;PBcalls=17;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=117;DistBack=-1;DistForward=10609;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=12:80383079-80383078;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:1:28:2:16:1/1:0:30:0:36:1/1:0:30:./.:.:.:.:.:.
chr12	83052961	HG2_Ill_250bpfermikitraw_17862	T	TTTAGCTAGACACAGAGTGCTGATTGGTGCATTTACAATCCTTTAGACACAAAAGTTCACCAAGTCCCCACCTGA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_17862:HG2_PB_pbsv_13337:HG4_PB_HySA_19471:HG4_PB_pbsv_13356:HG2_PB_HySA_24292:HG3_PB_pbsv_13030:HG3_PB_HySA_20135:HG4_Ill_Krunchall_18520:HG4_Ill_GATKHC_21376:HG4_Ill_GATKHCSBGrefine_9218:HG3_Ill_GATKHC_21260:HG3_Ill_250bpfermikitraw_17366:HG2_Ill_Krunchall_18200:HG2_Ill_GATKHC_21382;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17862:HG4_Ill_Krunchall_18520:HG4_Ill_GATKHC_21376:HG4_Ill_GATKHCSBGrefine_9218:HG3_Ill_GATKHC_21260:HG3_Ill_250bpfermikitraw_17366:HG2_Ill_Krunchall_18200:HG2_Ill_GATKHC_21382;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0774194;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.230769;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=18928;DistForward=115;DistMin=115;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=117;REFWIDENED=12:83052962-83053078;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:0|1:26:6:1:27:./.:4:16:4:2:0/1:19:25:./.:.:.:.:.:.
chr12	84086112	HG2_10X_SVrefine210Xhap12_9337	T	TCACCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4404:HG3_PB_pbsv_13037:HG3_PB_assemblyticsfalcon_5911:HG4_PB_pbsv_13362:HG2_PB_pbsv_13340:HG2_PB_HySA_24302:HG4_PB_assemblyticsfalcon_5828:HG3_PB_SVrefine2PBcRDovetail_6305:HG3_PB_SVrefine2Falcon1Dovetail_8065:HG4_PB_SVrefine2Falcon1Dovetail_8143:HG2_PB_SVrefine2PB10Xhap12_9635:HG2_PB_SVrefine2PBcRplusDovetail_2439:HG2_10X_SVrefine210Xhap12_9337:HG2_PB_SVrefine2Falcon2Bionano_6606:HG2_PB_SVrefine2Falcon1plusDovetail_2571:HG3_PB_HySA_20146:HG2_PB_HySA_24301:HG2_PB_PB10Xdip_7865:HG2_PB_PB10Xdip_7864;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9337:HG2_PB_SVrefine2PBcRplusDovetail_2439;NumExactMatchSVs=2;ClusterMaxShiftDist=0.158824;ClusterMaxSizeDiff=0.158824;ClusterMaxEditDist=0.240688;PBcalls=17;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=325;DistBack=43827;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=12:84086113-84086124;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:1:20:0:9:1/1:0:7:0:5:1/1:0:19:1/1:2:36:.:.:.
chr12	84615106	HG2_Ill_svaba_16660	C	CATGCATATATATGCATGTATATGCATGTATATAGTATATACATGCATATAT	20	PASS	ClusterIDs=HG3_Ill_Spiral_13935:HG3_PB_pbsv_13041:HG4_PB_HySA_19484:HG2_PB_pbsv_13343:HG4_Ill_svaba_16711:HG3_Ill_svaba_16803:HG3_Ill_GATKHC_21278:HG3_Ill_FB_11558:HG3_Ill_250bpfermikitraw_17377:HG3_Ill_150bpfermikitraw_16885:HG2_Ill_svaba_16660:HG4_Ill_manta_3144:HG4_Ill_Krunchall_18536:HG4_Ill_GATKHC_21393:HG4_Ill_GATKHCSBGrefine_9230:HG2_Ill_Krunchall_18212:HG2_Ill_GATKHCSBGrefine_8941:HG2_PB_HySA_24310;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_svaba_16660:HG3_Ill_150bpfermikitraw_16885:HG3_Ill_250bpfermikitraw_17377:HG3_Ill_FB_11558:HG3_Ill_GATKHC_21278:HG3_Ill_Spiral_13935:HG4_Ill_svaba_16711:HG3_Ill_svaba_16803;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0925926;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.234234;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=-1;DistForward=17;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=10;REFWIDENED=12:84615105-84615117;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:34:0|1:34:5:4:40:./.:20:2:0:18:0/1:19:18:./.:.:.:3304:.:.
chr12	84955204	HG2_PB_PB10Xdip_7867	T	TTTTTGTTTTTTTATTATACTCTAAGTTTTAGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGAGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGATTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGCATTAATCTGTAATTATGGCAGTATGGCCATTTTCACGATATTGATTCTTCTAATGAATGTTTTTTTTTTTTCTCTTTTATTTTTGAGATTTTGTATTCTTTGAAGAGTTTCACATTTGTAGTTATTCTAGTATTTTTTCTTTGAAGAAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6672:HG2_PB_pbsv_13344:HG3_PB_assemblyticsfalcon_5921:HG4_PB_pbsv_13367:HG3_PB_SVrefine2Falcon1Dovetail_8071:HG2_PB_SVrefine2PB10Xhap12_9639:HG2_PB_PB10Xdip_7867:HG2_PB_SVrefine2Falcon2Bionano_6610:HG2_PB_SVrefine2PBcRplusDovetail_2443:HG2_PB_SVrefine2Falcon1plusDovetail_2575;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_7867;NumExactMatchSVs=1;ClusterMaxShiftDist=0.111815;ClusterMaxSizeDiff=0.111815;ClusterMaxEditDist=0.227617;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1713;DistBack=-12;DistForward=12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=12:84955205-84955208;PctSeqSimilarity=0.9684;PctSizeSimilarity=0.9386;PctRecOverlap=0.9386;SizeDiff=-112;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=94;MatchId=1230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:33:0|1:37:0:0:30:./.:1:6:44:0:0/1:28:10:0/1:53:217:.:1846:.
chr12	85154693	HG2_PB_PB10Xdip_7886	T	TTATATTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2577:HG3_PB_pbsv_13044:HG2_PB_HySA_24319:HG4_PB_pbsv_13369:HG4_PB_HySA_19491:HG2_PB_pbsv_13346:HG4_PB_SVrefine2Falcon1Dovetail_8150:HG4_PB_assemblyticsfalcon_5844:HG3_PB_assemblyticsfalcon_5923:HG3_PB_HySA_20158:HG3_PB_SVrefine2Falcon1Dovetail_8072:HG2_PB_SVrefine2PB10Xhap12_9640:HG2_PB_SVrefine2Falcon2Bionano_6611:HG2_PB_PB10Xdip_7887:HG2_PB_PB10Xdip_7886:HG2_PB_SVrefine2PBcRplusDovetail_2445;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_7886:HG2_PB_PB10Xdip_7887;NumExactMatchSVs=2;ClusterMaxShiftDist=0.185693;ClusterMaxSizeDiff=0.185693;ClusterMaxEditDist=0.299694;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=334;DistBack=1505;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=12:85154694-85154718;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.9941;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:87:1/1:2:14:0:12:./.:0:1:0:6:1/1:0:15:./.:3:58:.:.:.
chr12	85506275	HG2_PB_SVrefine2Falcon1plusDovetail_2579	T	TAAGAGTTTTGCTTCTAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAGAAGTTAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4405:HG3_PB_pbsv_13046:HG2_PB_pbsv_13348:HG4_PB_assemblyticsfalcon_5845:HG2_PB_HySA_24321:HG3_PB_HySA_20161:HG2_PB_SVrefine2Falcon2Bionano_6613:HG2_PB_SVrefine2Falcon1plusDovetail_2579:HG3_Ill_MetaSV_1191:HG2_Ill_GATKHCSBGrefine_8944:HG4_PB_SVrefine2Falcon1Dovetail_8151;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2579:HG2_PB_SVrefine2Falcon2Bionano_6613;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0807175;ClusterMaxSizeDiff=0.0807175;ClusterMaxEditDist=0.180214;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=774;DistBack=15;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:85506276-85506290;PctSeqSimilarity=0.9981;PctSizeSimilarity=0.9961;PctRecOverlap=0.9974;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1232.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:40:0|1:34:7:0:27:0|1:34:0:0:11:0/1:30:6:0/1:12:76:.:.:.
chr12	86034071	HG2_CG_vcfBeta_7568	G	GCAGAGCCAAAAAAGTGACTAAAAAGAATGAATTAAGAGGTCAGCGAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_24326:HG4_PB_HySA_19494:HG2_PB_HySA_24327:HG4_PB_pbsv_13371:HG4_PB_SVrefine2PBcRDovetail_6675:HG2_PB_pbsv_13351:HG4_Ill_svaba_16725:HG2_Ill_breakscan11_4406:HG4_Ill_scalpel_12318:HG4_Ill_SVrefine2DISCOVARDovetail_9538:HG4_Ill_Krunchall_18549:HG4_Ill_GATKHC_21404:HG4_Ill_GATKHCSBGrefine_9233:HG4_Ill_FB_11544:HG4_Ill_250bpfermikitraw_17698:HG4_Ill_150bpfermikitraw_17037:HG4_CG_vcfBeta_8492:HG2_PB_SVrefine2Falcon2Bionano_6615:HG2_Ill_svaba_16676:HG2_Ill_Krunchall_18229:HG2_Ill_GATKHC_21416:HG2_Ill_GATKHCSBGrefine_8946:HG2_Ill_250bpfermikitraw_17894:HG2_Ill_150bpfermikitraw_16848:HG2_CG_vcfBeta_7568:HG2_10X_SVrefine210Xhap12_9349;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9349:HG2_CG_vcfBeta_7568:HG2_Ill_150bpfermikitraw_16848:HG2_Ill_250bpfermikitraw_17894:HG2_Ill_GATKHCSBGrefine_8946:HG2_Ill_GATKHC_21416:HG2_Ill_Krunchall_18229:HG2_Ill_svaba_16676:HG2_PB_SVrefine2Falcon2Bionano_6615:HG4_CG_vcfBeta_8492:HG4_Ill_150bpfermikitraw_17037:HG4_Ill_250bpfermikitraw_17698:HG4_Ill_FB_11544:HG4_Ill_GATKHCSBGrefine_9233:HG4_Ill_GATKHC_21404:HG4_Ill_Krunchall_18549:HG4_Ill_SVrefine2DISCOVARDovetail_9538:HG4_Ill_scalpel_12318:HG4_Ill_svaba_16725:HG4_PB_SVrefine2PBcRDovetail_6675;NumExactMatchSVs=20;ClusterMaxShiftDist=0.152381;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.306306;PBcalls=7;Illcalls=16;TenXcalls=1;CGcalls=2;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=2;HG2count=13;HG3count=0;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=50;DistBack=4389;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=51;REFWIDENED=12:86034072-86034122;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1233.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:32:./.:10:22:21:4:1|0:1:26:18:0:0/1:19:16:./.:.:.:.:.:.
chr12	86504078	HG3_Ill_GATKHCSBGrefine_8837	C	CTATATATATATAGTCTATATATATAGACTATATATATATAGTCTATATATAGTCTATATA	10	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_8948:HG4_Ill_GATKHC_21410:HG4_Ill_GATKHCSBGrefine_9235:HG3_Ill_GATKHC_21302:HG3_Ill_GATKHCSBGrefine_8837:HG2_Ill_GATKHC_21420;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8948:HG4_Ill_GATKHC_21410:HG4_Ill_GATKHCSBGrefine_9235:HG3_Ill_GATKHC_21302:HG3_Ill_GATKHCSBGrefine_8837:HG2_Ill_GATKHC_21420;NumExactMatchSVs=6;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=60;DistBack=-1;DistForward=12487;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=57;REFWIDENED=12:86504034-86504090;PctSeqSimilarity=0.8421;PctSizeSimilarity=0.7317;PctRecOverlap=0.7349;SizeDiff=-22;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=76;MatchId=1234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:72:./.:0:3:2:56:./.:4:3:2:20:0/1:4:28:./.:.:.:.:.:.
chr12	87870814	HG4_PB_SVrefine2PBcRDovetail_6684	A	ACTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_24359:HG2_PB_pbsv_13363:HG4_PB_pbsv_13385:HG4_PB_assemblyticsfalcon_5872:HG2_PB_PB10Xdip_8053:HG3_PB_HySA_20197:HG2_PB_SVrefine2PB10Xhap12_9656:HG4_PB_SVrefine2PBcRDovetail_6684:HG3_PB_pbsv_13061:HG4_PB_HySA_19520:HG2_Ill_breakscan11_4407;NumClusterSVs=11;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_6684;NumExactMatchSVs=1;ClusterMaxShiftDist=0.217532;ClusterMaxSizeDiff=0.194805;ClusterMaxEditDist=0.30972;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=37;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=12:87870815-87870823;PctSeqSimilarity=0.9922;PctSizeSimilarity=0.9876;PctRecOverlap=0.9876;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1236.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:0|1:27:0:0:29:1|0:0:10:20:1:0/1:21:7:0/1:10:22:.:.:.
chr12	88111348	HG4_Ill_250bpfermikitraw_17725	A	ATATATATTTGGTATATATATGTATATATATATGATATATATATATTTGTTATATATATGTATATATGTATATATATGATATATATATTTGT	20	PASS	ClusterIDs=HG4_PB_pbsv_13386:HG3_PB_HySA_20199:HG2_PB_pbsv_13364:HG4_PB_HySA_19523:HG2_PB_PB10Xdip_8057:HG2_PB_PB10Xdip_8056:HG2_Ill_breakscan11_4408:HG2_PB_HySA_24368:HG4_Ill_svaba_16755:HG4_Ill_manta_3150:HG4_Ill_Krunchall_18579:HG4_Ill_GATKHC_21433:HG4_Ill_GATKHCSBGrefine_9242:HG4_Ill_250bpfermikitraw_17725:HG4_Ill_150bpfermikitraw_17061:HG3_Ill_svaba_16848:HG3_Ill_manta_3041:HG3_Ill_Spiral_13978:HG3_Ill_Krunchall_17913:HG3_Ill_GATKHC_21328:HG3_Ill_GATKHCSBGrefine_8846:HG3_Ill_250bpfermikitraw_17428:HG3_Ill_150bpfermikitraw_16928:HG2_Ill_svaba_16704:HG2_Ill_manta_3714:HG2_Ill_SpiralSDKrefine_3747:HG2_Ill_Krunchall_18249:HG2_Ill_GATKHC_21440:HG2_Ill_GATKHCSBGrefine_8953:HG2_Ill_250bpfermikitraw_17921:HG2_Ill_150bpfermikitraw_16870:HG3_PB_pbsv_13062;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16870:HG2_Ill_250bpfermikitraw_17921:HG2_Ill_GATKHCSBGrefine_8953:HG2_Ill_GATKHC_21440:HG2_Ill_Krunchall_18249:HG2_Ill_SpiralSDKrefine_3747:HG2_Ill_manta_3714:HG2_Ill_svaba_16704:HG3_Ill_150bpfermikitraw_16928:HG3_Ill_250bpfermikitraw_17428:HG3_Ill_GATKHCSBGrefine_8846:HG3_Ill_GATKHC_21328:HG3_Ill_Krunchall_17913:HG3_Ill_Spiral_13978:HG3_Ill_manta_3041:HG3_Ill_svaba_16848:HG4_Ill_150bpfermikitraw_17061:HG4_Ill_250bpfermikitraw_17725:HG4_Ill_GATKHCSBGrefine_9242:HG4_Ill_GATKHC_21433:HG4_Ill_Krunchall_18579:HG4_Ill_manta_3150:HG4_Ill_svaba_16755;NumExactMatchSVs=23;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.104167;ClusterMaxEditDist=0.265306;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=91;DistBack=161449;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=99;REFWIDENED=12:88111327-88111425;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:65:1/1:1:17:2:16:1/1:0:12:0:14:1/1:0:57:./.:.:.:.:.:.
chr12	88338159	HG3_PB_SVrefine2PBcRDovetail_6322	T	TAAAAGAAAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8058:HG3_PB_pbsv_13064:HG2_PB_pbsv_13366:HG4_PB_assemblyticsfalcon_5877:HG2_PB_HySA_24370:HG4_PB_pbsv_13389:HG4_PB_HySA_19526:HG2_Ill_breakscan11_4409:HG2_Ill_MetaSV_1085:HG4_PB_SVrefine2PBcRDovetail_6687:HG4_Ill_MetaSV_1162:HG4_Ill_GATKHCSBGrefine_9244:HG3_PB_SVrefine2PBcRDovetail_6322:HG3_Ill_MetaSV_1198:HG3_Ill_GATKHCSBGrefine_8848:HG2_PB_SVrefine2PBcRplusDovetail_2459:HG2_PB_SVrefine2PB10Xhap12_9659:HG2_PB_SVrefine2Falcon2Bionano_6627:HG2_PB_SVrefine2Falcon1plusDovetail_2586:HG2_Ill_GATKHCSBGrefine_8954:HG4_PB_SVrefine2Falcon1Dovetail_8163:HG2_10X_SVrefine210Xhap12_9356:HG3_PB_SVrefine2Falcon1Dovetail_8085:HG3_PB_HySA_20201:HG2_PB_PB10Xdip_8059;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8954:HG2_PB_SVrefine2Falcon1plusDovetail_2586:HG2_PB_SVrefine2Falcon2Bionano_6627:HG2_PB_SVrefine2PB10Xhap12_9659:HG2_PB_SVrefine2PBcRplusDovetail_2459:HG3_Ill_GATKHCSBGrefine_8848:HG3_Ill_MetaSV_1198:HG3_PB_SVrefine2PBcRDovetail_6322:HG4_Ill_GATKHCSBGrefine_9244:HG4_Ill_MetaSV_1162:HG4_PB_SVrefine2PBcRDovetail_6687;NumExactMatchSVs=11;ClusterMaxShiftDist=0.1344;ClusterMaxSizeDiff=0.1344;ClusterMaxEditDist=0.229709;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=307;DistBack=59878;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=12:88338160-88338170;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:1:26:0:11:./.:0:5:0:4:1/1:0:28:1/1:2:80:.:.:.
chr12	88520871	HG4_Ill_manta_3151	A	AAAAGAGACTCCAAAATTATTTAATTCAAAAGGAGTATATAATAAAAATGAAATTTAATTTCAACAGGAG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_16873:HG3_PB_pbsv_13065:HG4_PB_pbsv_13390:HG2_PB_pbsv_13367:HG2_PB_PB10Xdip_8060:HG2_PB_HySA_24371:HG4_PB_assemblyticsfalcon_5879:HG4_Ill_svaba_16757:HG4_Ill_manta_3151:HG4_Ill_Krunchall_18582:HG4_Ill_GATKHC_21436:HG4_Ill_GATKHCSBGrefine_9245:HG4_Ill_Cortex_793:HG4_Ill_250bpfermikitraw_17729:HG4_Ill_150bpfermikitraw_17064:HG3_Ill_svaba_16850:HG3_Ill_manta_3042:HG3_Ill_Spiral_13979:HG3_Ill_Krunchall_17916:HG3_Ill_GATKHC_21331:HG3_Ill_GATKHCSBGrefine_8849:HG3_Ill_Cortex_840:HG3_Ill_250bpfermikitraw_17432:HG3_Ill_150bpfermikitraw_16931:HG2_Ill_svaba_16707:HG2_Ill_manta_3715:HG2_Ill_SpiralSDKrefine_3750:HG2_Ill_Krunchall_18251:HG2_Ill_GATKHC_21443:HG2_Ill_GATKHCSBGrefine_8955:HG2_Ill_Cortex_1916:HG2_Ill_250bpfermikitraw_17925;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16873:HG4_PB_assemblyticsfalcon_5879:HG4_Ill_svaba_16757:HG4_Ill_manta_3151:HG4_Ill_Krunchall_18582:HG4_Ill_GATKHC_21436:HG4_Ill_GATKHCSBGrefine_9245:HG4_Ill_Cortex_793:HG4_Ill_250bpfermikitraw_17729:HG4_Ill_150bpfermikitraw_17064:HG3_Ill_svaba_16850:HG3_Ill_manta_3042:HG3_Ill_Spiral_13979:HG3_Ill_Krunchall_17916:HG3_Ill_GATKHC_21331:HG3_Ill_GATKHCSBGrefine_8849:HG3_Ill_Cortex_840:HG3_Ill_250bpfermikitraw_17432:HG3_Ill_150bpfermikitraw_16931:HG2_Ill_svaba_16707:HG2_Ill_manta_3715:HG2_Ill_SpiralSDKrefine_3750:HG2_Ill_Krunchall_18251:HG2_Ill_GATKHC_21443:HG2_Ill_GATKHCSBGrefine_8955:HG2_Ill_Cortex_1916:HG2_Ill_250bpfermikitraw_17925;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.228571;PBcalls=6;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=15927;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=12:88520872-88520876;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1239.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:57:1/1:1:11:1:7:1/1:0:19:0:36:1/1:0:61:./.:.:.:.:.:.
chr12	88605724	HG2_Ill_scalpel_12630	T	TATATATTATATATATATATATATATATATATAATATATATATATATATATATAATATATA	20	PASS	ClusterIDs=HG2_PB_HySA_24372:HG4_PB_pbsv_13391:HG3_Ill_svaba_16851:HG3_Ill_scalpel_12887:HG3_Ill_manta_3043:HG3_Ill_Spiral_13981:HG3_Ill_GATKHC_21332:HG3_Ill_GATKHCSBGrefine_8851:HG3_Ill_FB_11588:HG3_Ill_150bpfermikitraw_16932:HG2_Ill_svaba_16708:HG2_Ill_scalpel_12630:HG2_Ill_GATKHC_21445:HG2_Ill_GATKHCSBGrefine_8957:HG3_Ill_SVrefine2DISCOVARDovetail_9687:HG2_Ill_SVrefine2DISCOVARplusDovetail_2896:HG3_PB_pbsv_13066:HG2_PB_SVrefine2Falcon1plusDovetail_2587:HG4_Ill_scalpel_12339:HG2_PB_SVrefine2Falcon2Bionano_6628;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8957:HG2_Ill_GATKHC_21445:HG2_Ill_scalpel_12630:HG2_Ill_svaba_16708:HG3_Ill_150bpfermikitraw_16932:HG3_Ill_FB_11588:HG3_Ill_GATKHCSBGrefine_8851:HG3_Ill_GATKHC_21332:HG3_Ill_Spiral_13981:HG3_Ill_manta_3043:HG3_Ill_scalpel_12887:HG3_Ill_svaba_16851;NumExactMatchSVs=12;ClusterMaxShiftDist=0.361905;ClusterMaxSizeDiff=0.361905;ClusterMaxEditDist=0.361905;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=6;DistForward=9;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=70;REFWIDENED=12:88605717-88605786;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:36:./.:16:16:4:11:./.:1:14:0:4:0/1:3:22:./.:.:.:.:.:.
chr12	92143456	HG2_PB_SVrefine2Falcon2Bionano_6635	T	TCTCTCTCTCTCTCCCTCCCTCTCTCTCTCTCCCTCCCTCTCTCTCTCTCCCTCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8083:HG4_PB_pbsv_13402:HG4_PB_HySA_19557:HG2_PB_HySA_24396:HG4_PB_SVrefine2Falcon1Dovetail_8174:HG3_PB_HySA_20225:HG2_PB_pbsv_13379:HG2_Ill_breakscan11_4411:HG4_PB_SVrefine2PBcRDovetail_6692:HG3_PB_SVrefine2PBcRDovetail_6331:HG3_PB_SVrefine2Falcon1Dovetail_8095:HG2_PB_SVrefine2PBcRplusDovetail_2466:HG2_PB_SVrefine2PB10Xhap12_9669:HG2_PB_SVrefine2Falcon2Bionano_6635:HG2_PB_SVrefine2Falcon1plusDovetail_2596:HG2_PB_PB10Xdip_8084;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2596:HG2_PB_SVrefine2Falcon2Bionano_6635:HG2_PB_SVrefine2PB10Xhap12_9669:HG2_PB_SVrefine2PBcRplusDovetail_2466:HG3_PB_SVrefine2Falcon1Dovetail_8095:HG3_PB_SVrefine2PBcRDovetail_6331:HG4_PB_SVrefine2PBcRDovetail_6692;NumExactMatchSVs=7;ClusterMaxShiftDist=0.126126;ClusterMaxSizeDiff=0.126126;ClusterMaxEditDist=0.178571;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=4;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=12:92143457-92143492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:55:1/1:2:29:4:27:./.:0:17:1:16:0/1:2:12:./.:.:.:.:.:.
chr12	92738526	HG2_Ill_GATKHCSBGrefine_8965	C	CAAATATATATATATATATATATATATATAAATAAATATATATATATATATATATAAAT	20	PASS	ClusterIDs=HG2_PB_HySA_24401:HG2_PB_pbsv_13381:HG3_PB_pbsv_13084:HG3_Ill_svaba_16885:HG3_Ill_manta_3046:HG3_Ill_Krunchall_17953:HG3_Ill_GATKHC_21369:HG3_Ill_GATKHCSBGrefine_8864:HG3_Ill_FB_11607:HG3_Ill_250bpfermikitraw_17463:HG3_Ill_150bpfermikitraw_16964:HG2_PB_assemblyticsPBcR_5806:HG2_Ill_breakscan11_4412:HG3_Ill_Spiral_14004:HG3_Ill_SVrefine2DISCOVARDovetail_9699:HG3_Ill_Krunchall_17952:HG3_Ill_GATKHC_21368:HG3_Ill_GATKHCSBGrefine_8863:HG3_Ill_250bpfermikitraw_17462:HG3_Ill_150bpfermikitraw_16963:HG2_Ill_Krunchall_18283:HG2_Ill_GATKHC_21473:HG2_Ill_GATKHCSBGrefine_8965:HG2_Ill_250bpfermikitraw_17949:HG2_Ill_150bpfermikitraw_16898:HG2_10X_SVrefine210Xhap12_9365;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9365:HG2_Ill_150bpfermikitraw_16898:HG2_Ill_250bpfermikitraw_17949:HG2_Ill_GATKHCSBGrefine_8965:HG2_Ill_GATKHC_21473:HG2_Ill_Krunchall_18283:HG3_Ill_150bpfermikitraw_16963:HG3_Ill_250bpfermikitraw_17462:HG3_Ill_GATKHCSBGrefine_8863:HG3_Ill_GATKHC_21368:HG3_Ill_Krunchall_17952:HG3_Ill_SVrefine2DISCOVARDovetail_9699:HG3_Ill_Spiral_14004;NumExactMatchSVs=13;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.123894;ClusterMaxEditDist=0.168067;PBcalls=4;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=16;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=58;DistBack=52733;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=91;REFWIDENED=12:92738527-92738617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:48:0|1:25:2:2:53:0|1:18:0:0:19:0/1:29:27:./.:.:.:.:.:.
chr12	92866895	HG2_Ill_GATKHC_21475	T	TATATATATATATATATATATATATATATATATATATATATATATTTTCAGCAGGTCTTTG	20	PASS	ClusterIDs=HG4_Ill_manta_3153:HG4_Ill_scalpel_12357:HG2_PB_pbsv_13382:HG4_Ill_GATKHC_21471:HG4_Ill_GATKHCSBGrefine_9255:HG4_Ill_250bpfermikitraw_17759:HG2_Ill_SpiralSDKrefine_3770:HG2_Ill_GATKHC_21475:HG2_Ill_GATKHCSBGrefine_8966:HG2_Ill_150bpfermikitraw_16902:HG4_PB_HySA_19562:HG2_PB_HySA_24403:HG2_Ill_manta_3719:HG4_PB_pbsv_13405;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16902:HG2_Ill_GATKHCSBGrefine_8966:HG2_Ill_GATKHC_21475:HG2_Ill_SpiralSDKrefine_3770:HG4_Ill_250bpfermikitraw_17759:HG4_Ill_GATKHCSBGrefine_9255:HG4_Ill_GATKHC_21471:HG4_Ill_scalpel_12357;NumExactMatchSVs=8;ClusterMaxShiftDist=0.233577;ClusterMaxSizeDiff=0.218978;ClusterMaxEditDist=0.3;PBcalls=4;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=0;DistForward=46775;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=12:92866896-92866918;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1243.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:19:0|1:36:1:2:17:1|0:0:6:13:0:0/1:31:11:./.:.:.:.:.:.
chr12	92970216	HG2_Ill_150bpfermikitraw_16904	G	GTGTATATATATATATATATATATATATACATATATATATATATATACATATATATATATATACATGTATA	20	PASS	ClusterIDs=HG3_PB_pbsv_13085:HG4_Ill_manta_3155:HG4_PB_pbsv_13407:HG4_Ill_GATKHC_21474:HG2_PB_pbsv_13383:HG4_Ill_GATKHCSBGrefine_9257:HG4_Ill_150bpfermikitraw_17095:HG2_Ill_manta_3720:HG2_Ill_GATKHC_21477:HG2_Ill_GATKHCSBGrefine_8967:HG2_Ill_150bpfermikitraw_16904:HG3_Ill_manta_3047:HG3_Ill_Spiral_14005:HG3_Ill_GATKHC_21370:HG3_Ill_GATKHCSBGrefine_8865:HG4_PB_HySA_19563;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16904:HG2_Ill_GATKHCSBGrefine_8967:HG2_Ill_GATKHC_21477:HG2_Ill_manta_3720:HG4_Ill_150bpfermikitraw_17095:HG4_Ill_GATKHCSBGrefine_9257:HG4_Ill_GATKHC_21474:HG4_Ill_manta_3155;NumExactMatchSVs=8;ClusterMaxShiftDist=0.191781;ClusterMaxSizeDiff=0.191781;ClusterMaxEditDist=0.266667;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=39290;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=12:92970217-92970251;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:28:0|1:47:4:1:20:./.:2:18:20:0:0/1:19:7:./.:.:.:.:.:.
chr12	93310375	HG3_PB_SVrefine2Falcon1Dovetail_8097	G	GCCAAGATTGTGCCATTGCACTCCAGCCCAGGCAACAGGGTAAGACTCCATCGCAAAAAAAAAAAAAAAATCTGTTAGGTGGCCAGACGCAGTGGCTCATGAGGCCAGGAATTTGAGAACAGTCTGGTCAACATGGCAAAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCATGGGGGCATGTGTCTGTAATCCCAGCTATTTGGGAGGCTGAGGCATGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCTAGATCGCACCATTACACTCCATCCTGGGCAACGGTGAGACTTTGTCTCAAAAAAAAAAAAAAAAATCTGTTAGGTAACACTTTATAATCTAACAGAAATTAGAATCTACTGGCCACAGATTCCCATTATAAAAGATATATAGAATCAGTTTCAAAGAAGTAGACCACAAAGTTCGTAAAATTAAAATCTATCCTGAATATAATCATTTTCTATAATGCAAAAATTGAGAGAGACGATCCAAATAGCAGATGACTGTCATAACTTGGGTTCCCAAAGAAACAGACTCTGAGACTGAAATCTGCATACAAGAGGTTTATCGGGAAGTAATCTCAAGAACAACACCTGTGTGGGCATAGAGGAAAGCATGACTGGGTAGAGGGAGAAGTTGAACAGTACTGAACGGTAACACAATCCCAACAGCAACCTCAGTGAATCCTACTAAGAGTTCTGAAGTTGGGACAGTCCCTCATATAAGACCCTAATGAGGCAAAGCATATCTTCCACATTAATCATTAATTAAATGCAGGCTGCTTCCAGAAAGGAGACATAATCTTGGGTGCTTTCTTCTACAAGCTGCTATGACTCTAGGCAGCTAAAGGAAGGTGTCTCCACCCTGAATGGGGATCTAGGTGTCACACTACAATAATGTGCCTTACTTGCCTTTGAAATATCAAAAAGGGCTATACACTGGAGGGACAAAGATCTCGGTAAAGAAGGAGACCTAATATCTTCTGGAGCCTACTATGTGGCAGGTGCTGTTTCCACCACTGCACTCCAGCCTGGACAACAGAGCAAGACTGTGACTTAAAAAAGAAAAAAAGAGAGATCACCGGTCGGGCGCGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCGAGGCAGGCAATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAACTTGGAGAAACCCCATCTCTACTAAAACTACAAAATTAGCCAGGCATGGTGGTGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGCTGTGGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGCAACAAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAATTTACTTAACAGCAGAAACAAGATGCAAACAGGTGAACTGAGTCCTTTAATAGATGAAACCTACAGTGAAAAATCTATAAAGCCCTGTCACAGAGCTCCCAAAGAGCACTGCCTTAATCCTGCAAAGCCTTCCAGTAAAAATGTCTCAGAGGCTGAGCGCCACATGACATTTTTCGTCTTGGATTTCTATGAAATTCTATCTTTTTTTATTGCAGAGTGTATCCTTATAACCATTACTATCCTATTTGAGCTAACCCAATAGATTCTTTACTCCTAGAACCAAATGAACTTAATCAGAACCATTATCACTGTTACAGAGCCACGTTAAAGTTTATTTCTAGAAGAATGACCTATAAAAGATGTGTTTTATGGTGCCACAACTCCTAGAAGACACAATATTACCCCACCCCCAACCTTGGTTGACTAGACCAGCAATGGACACTTGACTCGGAGGAAACAACTCTATTGGCCATCCAGAGACCTATGCATGACGTGACATGAAAAGATGAGAACGTTTTAGATTCTTCTGTTGGGATTTTGGAAACAAGACACTGGGCCAGTTGGCTATGCAAAGTTAACATGAAAGCCATGTGGAATCATGTCAGATGGCCATCATCAAAATCCTGGCCATACTTAGTAAGCAGCAGTGAGAAGAACAGGCACAGAGAAGCGGAGACAAGAAGCCAGTGGTCCATCACAGAGTGTGAGACAGACAAAAGAGCTGCCTCTGTCCCTGACACATTCTAGGTCCTGCTCTCCAGAGACCCAACTAGGTATACAGTAATTCCAGATCTTGGATCACTATGAAACCTTATAATAAATCCCCCTTTCAACTTCAAAATAATTTGAGGAGATCTGTAATCCTTGAAAATAAAGTTATTGGCTGGATGAGGTGGCTCACGACTGTAATCCCAGCACTCTGGGAGGCCGAGGCAGGCGGATCACAAGGTCAGGAGATCATCCTGGCCAACAGGGTGAAACTCTGTCTCTACTAAAAATACAAAACTTTGCCAGATATGGTGGCGCATGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATCGCTTGAGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGACCGACGCAGAAGACCGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGGGTGCGCGCACGGTGCGCGAGCCAAAGCACGGCAAGGCATTGCCTCACCTGGGAAGCTCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCAAATATTGCGCTTTTCAGACCGGCTTAAAAAACGGCGCAACACGAGACTATATCCCACACCTGGCTCTGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGTGATCAAACTGCAAGGCCGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGGGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGCAGACTGCCTCTTCAAGTGGGTCCCTGACCCCTGACCCCGAGCAGCCTAACTGGGAGGCATCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAAACAACCTGTACATCA	20	PASS	ClusterIDs=HG2_PB_pbsv_13385:HG2_PB_assemblyticsPBcR_5809:HG2_PB_HySA_24405:HG3_PB_HySA_20231:HG3_PB_SVrefine2Falcon1Dovetail_8097:HG2_PB_SVrefine2Falcon2Bionano_6636:HG3_PB_SVrefine2PBcRDovetail_6333:HG2_10X_SVrefine210Xhap12_9368:HG4_PB_SVrefine2Falcon1Dovetail_8176:HG2_PB_SVrefine2Falcon1plusDovetail_2597:HG2_PB_SVrefine2PBcRplusDovetail_2467:HG2_PB_SVrefine2PB10Xhap12_9671:HG2_PB_PB10Xdip_8086:HG2_PB_PB10Xdip_8085;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8097;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00984487;ClusterMaxSizeDiff=0.00507993;ClusterMaxEditDist=0.166468;PBcalls=13;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=3341;DistBack=21445;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6763;REFWIDENED=12:93310376-93300604;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9973;PctRecOverlap=0.997;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:70:1/1:0:15:0:20:./.:0:10:0:4:1/1:0:12:1/1:3:494:.:3399:.
chr12	93685213	HG4_PB_SVrefine2PBcRDovetail_6693	T	TCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGGCTGCCACCACTCCCGGCTAATTTTTTGTATTTTTAGTAGGGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTTGTGATCCG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2915:HG2_PB_HySA_24410:HG3_PB_pbsv_13088:HG4_PB_pbsv_13409:HG4_Ill_250bpfermikitraw_17771:HG2_PB_pbsv_13387:HG2_Ill_250bpfermikitraw_17961:HG2_PB_PB10Xdip_8088:HG2_PB_PB10Xdip_8087:HG4_PB_HySA_19570:HG2_PB_SVrefine2Falcon1plusDovetail_2599:HG4_PB_SVrefine2PBcRDovetail_6693:HG4_PB_SVrefine2Falcon1Dovetail_8177:HG4_Ill_SVrefine2DISCOVARDovetail_9568:HG3_PB_SVrefine2Falcon1Dovetail_8099:HG2_PB_SVrefine2PBcRplusDovetail_2469:HG2_PB_SVrefine2PB10Xhap12_9674:HG2_PB_SVrefine2Falcon2Bionano_6638;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2915:HG4_PB_SVrefine2PBcRDovetail_6693:HG4_PB_SVrefine2Falcon1Dovetail_8177:HG4_Ill_SVrefine2DISCOVARDovetail_9568:HG3_PB_SVrefine2Falcon1Dovetail_8099:HG2_PB_SVrefine2PBcRplusDovetail_2469:HG2_PB_SVrefine2PB10Xhap12_9674:HG2_PB_SVrefine2Falcon2Bionano_6638;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0797101;ClusterMaxSizeDiff=0.064982;ClusterMaxEditDist=0.259928;PBcalls=14;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=134;DistBack=4489;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=182;REFWIDENED=12:93685214-93685395;PctSeqSimilarity=0.9742;PctSizeSimilarity=1;PctRecOverlap=0.4222;SizeDiff=0;StartDistance=-78;EndDistance=-78;GTMatch=0;TruScore=79;MatchId=1246.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:4:55:1/1:5:22:2:21:./.:2:5:1:3:0/1:18:16:./.:.:.:.:.:.
chr12	93845894	HG2_PB_HySA_24412	T	TTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGCTGCCCAGGCTGGAGCGCAGTGGTGTCATCATGGTTCACTGCAACCCCGACTTCCTGGGTTCAAACTATCCTCCCATCTGAGCCTCCTGAATAGCTGAAACCATAGGCACATACCACCATGACTGGCTAATTTTTGTTTTTTTTTTTTTTTTTTGAGCCACCAGCCACCACACCTGGTTTAGGAACTAAATTTTTTTTAAATTTTTTTTTTAAAGATAGAGATGGGGTCTTGCTTTGTTGCCCAGGCTGGTCTCGAACTCCTAAGCTCAAGCGATCCTCTGGCCTTGGCCTCCCAAAGTGCTGGGTTCACAGGCATAAGCCACCATGCCTGGTCTAGGAAGTAAATTTTTTTTTAATGAACAAGGTAGGAAAGGTAGGATCTCTGATCTTGAATTTGCATTTTTTTTTCTTTTTTTTTTTGAGATGGAGTTTTGCTTTTGTTGCCCAGGCTGGAGTGCGATAGTGCGATCGCGGCTCACTGCAACCTCCGCCTCCCAGGCTCAAGCAATTCTCCTGCGTTAGCCTCCCAAGTAGCTGGGATTATAGGCATGTGCCACCACACCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTGCACCATGTTGGTCAGGCTGGTCTGAAACTCCTGACCTCAGGTGATCCACTCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCAGGCCCCGACTGCTTACTTTCTATGACAACTCCCTGAAAGCAACCCCAGATCACAACCTGGGCAATCTCTTCATTGTTTTGAACGTCCTATAATGGGTCATACTTGCACTCCCTCTAACACCATAATTTTCACATCTGGTTGCCTTTTCACAAGTGGTTCTCCACCCCATCTGCCTGATGGTTTCTTGCCCTCCTCCATGAATGTTATATGTAAAATGTTTATTTAAAAACAGAATGCTTGTTCCTTGGTACCACAAGGAAAAATTAGCATTCAGACAAAAATTCTCTCAACGAGGCAATTTTACTTTCTGCAGAAAGGGTGCTCCTCGCAGATGGAACAATGGTGACAGCACATCTGAACAAAGGAGGGAAGCAATTTTTATTCCTTATGCAGCTTGTCCTTGCTACTGTGTCCTGTCTCCATTGGCTGGAGCCAGACCTCACAGTCTAAACTGCACCCGATTGGTAACAGCTTAAAAACTTTTAAAAAATAGGTAAAAGCAATGGAGAACAGAGGAAAAGAGGAAGTTGCTTACCAAAGGACTTAGAAAAGTAATAATATTCCCAAATAAGGAAGGGGCATAGGCTGCGAGCTGGGACATGCCTGTGAGCACGTCCAGCACAAATATCTTGGTTAAAGTACAAGGACATAGAAAGTACTATGTGCCTGTGAGCATGTCTAACAGCTACATAGGATAGGGCTTAACAGAGAGTTATTTGCACAAAGCAAGGAGGCTTAAAGGAAGTTAGTCTTTAAAAGAAATTATTATTTCTAACACTTATGATTTATTCTTTAACAAGAAGGGAAACTTTGAAGAGGAAACTTTTTACTTTCTACAGTGAAGTTTTCTCCATGTTCTCCAAAACACCTTGTTCATCATGTTCTAACAACAGTCACTTGTAATAATCTGTTTACCTGTCTCCTTCACCACATTGTGCACCCCTTTAAGGCAGGGAACACCATATTCTTCTTTGTTATGTGTTCAGCAGTAACATAATGGCTGCACACATTCTCTCCTTCCTGCCTTCACTCATTCTCTGCCTATGATGTATTATACTAGACCATCTATAGGAACTTTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGCTGCCCAGGCTGGAGCGCAGTGGTGTCATCATGGTTCACTGCAACCCCGACTTCCTGGGTTCAAACTATCCTCCCATCTGAGCCTCCTGAATAGCTGAAACCATAGGCACATACCACCATGACTGGCTAATTTTTGTTTTTTTTTTTTTTTTTTTGAGCCACCAGCCACCACACCTGGTTTAGGAACTAAATTTTTTTTAAATTTTTTTTTTAAAGATAGAGATGGGGTCTTGCTTTGTTGCCCAGGCTGGTCTCGAACTCCTAAGCTCAAGCGATCCTCTGGCCTTGGCCTCCCAAAGTGCTGGGTTCACAGGCATAAGCCACCATGCCTGGTCTAGGAAGTAAATTTTTTTTTAATGAACAAGGTAGGAAAGGTAGGATCTCTGATCTTGAATTTGCATTTTTTTTCTTTTTTTTTTTTGAGATGGAGTTTTGCTTTTGTTGCCCAGGCTGGAGTGCGATAGTGCGATCGCGGCTCACTGCAACCTCCGCCTCCCAGGCTCAAGCAATTCTCCTGCGTTAGCCTCCCAAGTAGCTGGGATTATAGGCATGTGCCACCACACCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTGCACCATGTTGGTCAGGCTGGTCTGAAACTCCTGACCTCAGGTGATCCACTCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCAGGCCCCGACTGCTTACTTTCTATGACAACTCCCTGAAAGCAACCCCAGATCACAACCTGGGCAATCTCTTCATTGTTTTGAACGTCCTATAATGGGTCATACTTGCACTCCCTCTAACACCATAATTTTCACATCTGGTTGCCTTTTCACAAGTGGTTCTCCACCCCATCTGCCTGATGGTTTCTTGCCCTCCTCCATGAATGTTATATGTAAAATGTTTATTTAAAAACAGAATGCTTGTTCCTTGGTACCACAAGGAAAAATTAGCATTCAGACAAAAATTCTCTCAACGAGGCAATTTTACTTTCTGCAGAAAGGGTGCTCCTCGCAGATGGAACAATGGTGACAGCACATCTGAACAAAGGAGGGAAGCAATTTTTATTCCTTATGCAGCTTGTCCTTGCTACTGTGTCCTGTCTCCATTGGCTGGAGCCAGACCTCACAGTCTAAACTGCACCCGATTGGTAACAGCTTAAAAACTTTTAAAAATAGGTAAAAGCAATGGAGAACAGAGGAAAAAGAGGAAGTTGCTTACCAAAGGACTTAGAAAAGTAATAATATTCCCAAATAAGGAAGGGGCATAGGCTGCGAGCTGGGACATGCCTGTGAGCACGTCCAGCACAAATATCTTGGTTAAAGTACAAGGACATAGAAAGTACTATGTGCCTGTGAGCATGTCTAACAGCTACATAGGATAGGGCTTAACAGAGAGTTATTTGCACAAAGCAAGGAGGCTTAAAGGAAGTTAGTCTTTAAAAGAAATTATTATTTCTAACACTTATGATTTATTCTTTAACAAGAAGGGAAACTTTGAAGAGGAAACTTTTTACTTTCTACAGTGAAGTTTTCTCCATGTTCTCCAAAACACCTTGTTCATCATGTTCTAACAACAGTCACTTGTAATAATCTGTTTACCTGTCTCCTTCACCACATTGTGCACCCCTTTAAGGCAGGGAACACCATATTCTTCTTTGTTATGTGTTCAGCAGTAACATAATGGCTGCACACATTCTCTCCTTCCTGCCTTCACTCATTCTCTGCCTATGATGTATTATACTAGACCATCTATAGGAAC	10	PASS	ClusterIDs=HG2_PB_HySA_24412:HG2_PB_PB10Xdip_8089;NumClusterSVs=2;ExactMatchIDs=HG2_PB_HySA_24412;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00138236;ClusterMaxSizeDiff=0.000552944;ClusterMaxEditDist=0.00276472;PBcalls=2;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=3617;DistBack=-733;DistForward=5529;DistMin=-733;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1897;REFWIDENED=12:93844733-93846629;PctSeqSimilarity=0.9989;PctSizeSimilarity=0.9994;PctRecOverlap=0.9992;SizeDiff=2;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:49:0|1:16:6:4:22:./.:2:2:0:8:./.:1:5:0/1:114:55:.:3588:.
chr12	95262306	HG3_Ill_MetaSV_1205	A	AATCCTTGGGCTCTTAAGACTTATGCCAAATTGACTTTGCCTGTGTTCTATAAATGGAGCCACAAAGCCTGGATGATAGCACGTCTGTTTACAACATGGCTTACTGAATATTTTAAGCCCACGTTGAGACCTACTGCTCAGAAAAAAAATAAAAAGATTCCTTTCAAATATTAATGCACATTGACAATGCACTTAGTCACCCAATATCTCTGATGGAAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_13392:HG2_Ill_breakscan11_4413:HG3_PB_pbsv_13094:HG4_Ill_svaba_16803:HG4_Ill_manta_3160:HG4_Ill_MetaSV_1169:HG4_Ill_GATKHCSBGrefine_9266:HG3_Ill_svaba_16900:HG3_Ill_MetaSV_1205:HG3_Ill_GATKHCSBGrefine_8874:HG2_Ill_svaba_16756:HG2_Ill_MetaSV_1091:HG2_Ill_GATKHCSBGrefine_8975:HG4_PB_HySA_19582:HG3_PB_HySA_20241:HG4_PB_SVrefine2PBcRDovetail_6696:HG3_PB_SVrefine2PBcRDovetail_6340:HG3_PB_SVrefine2Falcon1Dovetail_8103:HG3_Ill_SVrefine2DISCOVARDovetail_9711:HG2_PB_SVrefine2Falcon2Bionano_6644:HG2_PB_SVrefine2Falcon1plusDovetail_2604:HG2_10X_SVrefine210Xhap12_9378:HG4_PB_pbsv_13414;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8975:HG2_Ill_MetaSV_1091:HG2_Ill_svaba_16756:HG3_Ill_GATKHCSBGrefine_8874:HG3_Ill_MetaSV_1205:HG3_Ill_svaba_16900:HG4_Ill_GATKHCSBGrefine_9266:HG4_Ill_MetaSV_1169:HG4_Ill_manta_3160:HG4_Ill_svaba_16803;NumExactMatchSVs=10;ClusterMaxShiftDist=0.153499;ClusterMaxSizeDiff=0.148984;ClusterMaxEditDist=0.254945;PBcalls=10;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=219;DistBack=-4;DistForward=1651;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=12:95262303-95262310;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1249.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:32:0|1:19:5:1:31:1|0:0:15:22:0:0/1:30:10:./.:.:.:.:.:.
chr12	95870308	HG2_Ill_SVrefine2DISCOVARplusDovetail_2924	A	AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAG	20	PASS	ClusterIDs=HG3_PB_pbsv_13099:HG2_PB_HySA_24432:HG3_Ill_SVrefine2DISCOVARDovetail_9715:HG2_Ill_SVrefine2DISCOVARplusDovetail_2924:HG2_PB_SVrefine2Falcon1plusDovetail_2608:HG3_PB_HySA_20246:HG2_PB_pbsv_13397;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2924:HG3_Ill_SVrefine2DISCOVARDovetail_9715;NumExactMatchSVs=2;ClusterMaxShiftDist=0.090566;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.137405;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=132;DistBack=-10;DistForward=5;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=12:95870293-95870315;PctSeqSimilarity=0.9888;PctSizeSimilarity=0.9851;PctRecOverlap=0.9852;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:20:0|1:23:0:2:22:0|1:17:0:1:6:0/1:30:11:./.:.:.:.:.:.
chr12	96705362	HG2_Ill_GATKHCSBGrefine_8983	T	TGTTAATGGCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGATTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_pbsv_13107:HG2_PB_HySA_24445:HG2_PB_pbsv_13405:HG2_PB_assemblyticsfalcon_6025:HG2_PB_assemblyticsPBcR_5845:HG2_PB_SVrefine2Falcon1plusDovetail_2612:HG2_Ill_MetaSV_1098:HG2_Ill_GATKHCSBGrefine_8983:HG2_PB_SVrefine2PBcRplusDovetail_2487:HG2_Ill_breakscan11_4414:HG2_PB_SVrefine2PB10Xhap12_9692;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8983;NumExactMatchSVs=1;ClusterMaxShiftDist=0.211509;ClusterMaxSizeDiff=0.211509;ClusterMaxEditDist=0.242613;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:96705363-96705377;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:19:./.:10:9:7:5:0|1:23:0:0:8:0/1:28:14:0/1:10:22:.:.:.
chr12	97495344	HG2_PB_SVrefine2Falcon2Bionano_6654	T	TAAAAACAAATGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_13111:HG2_Ill_breakscan11_4415:HG2_PB_PB10Xdip_8127:HG2_PB_assemblyticsPBcR_5855:HG2_PB_assemblyticsfalcon_6034:HG2_PB_SVrefine2PB10Xhap12_9695:HG2_PB_SVrefine2PBcRplusDovetail_2489:HG2_PB_HySA_24456:HG3_PB_SVrefine2PBcRDovetail_6349:HG2_PB_SVrefine2Falcon2Bionano_6654:HG3_PB_SVrefine2Falcon1Dovetail_8110:HG2_PB_SVrefine2Falcon1plusDovetail_2613:HG2_PB_pbsv_13409:HG3_PB_HySA_20264;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6654;NumExactMatchSVs=1;ClusterMaxShiftDist=0.230648;ClusterMaxSizeDiff=0.230648;ClusterMaxEditDist=0.28752;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=336;DistBack=7059;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=12:97495345-97495358;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9941;PctRecOverlap=0.9941;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:35:0|1:20:5:3:37:0|1:35:0:0:8:0/1:39:9:0/1:11:28:.:.:.
chr12	97550758	HG2_Ill_MetaSV_1099	T	TGTAGGACCAGTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCACTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_13411:HG4_PB_pbsv_13422:HG4_PB_HySA_19612:HG4_PB_SVrefine2Falcon1Dovetail_8187:HG4_Ill_GATKHCSBGrefine_9276:HG2_Ill_MetaSV_1099:HG2_Ill_GATKHCSBGrefine_8986;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8986:HG2_Ill_MetaSV_1099:HG4_Ill_GATKHCSBGrefine_9276;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0607903;ClusterMaxSizeDiff=0.0607903;ClusterMaxEditDist=0.182635;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=47028;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=12:97550759-97550772;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:29:./.:31:5:10:15:1|0:0:9:21:0:0/1:20:14:0/1:11:24:.:.:.
chr12	97768433	HG2_Ill_GATKHCSBGrefine_8989	C	CCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTT	20	PASS	ClusterIDs=HG2_PB_HySA_24462:HG4_PB_assemblyticsfalcon_5952:HG4_Ill_GATKHC_21531:HG2_PB_pbsv_13414:HG2_PB_PB10Xdip_8129:HG2_PB_PB10Xdip_8128:HG4_Ill_GATKHCSBGrefine_9279:HG4_Ill_250bpfermikitraw_17812:HG2_Ill_GATKHCSBGrefine_8989:HG3_Ill_GATKHC_21433:HG4_PB_pbsv_13425:HG3_Ill_GATKHCSBGrefine_8890:HG2_Ill_GATKHC_21533:HG2_Ill_250bpfermikitraw_18002:HG2_PB_assemblyticsfalcon_6039:HG2_PB_assemblyticsPBcR_5861;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8989:HG4_Ill_250bpfermikitraw_17812:HG4_Ill_GATKHCSBGrefine_9279:HG4_Ill_GATKHC_21531;NumExactMatchSVs=4;ClusterMaxShiftDist=0.333333;ClusterMaxSizeDiff=0.333333;ClusterMaxEditDist=0.351852;PBcalls=8;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=-1;DistForward=48;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=154;REFWIDENED=12:97768375-97768528;PctSeqSimilarity=0.9194;PctSizeSimilarity=0.8485;PctRecOverlap=0.8507;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=87;MatchId=1254.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:64:1/1:1:10:1:9:./.:1:2:1:3:./.:3:19:./.:.:.:.:.:.
chr12	98886338	HG3_PB_SVrefine2Falcon1Dovetail_8114	C	TCAAAAAAAAAAAAAAATCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_13429:HG3_PB_SVrefine2Falcon1Dovetail_8114:HG4_PB_assemblyticsfalcon_5957:HG2_PB_assemblyticsfalcon_6044:HG3_PB_assemblyticsfalcon_6039:HG2_PB_HySA_24472:HG4_PB_SVrefine2Falcon1Dovetail_8189:HG4_PB_SVrefine2PBcRDovetail_6707:HG4_Ill_MetaSV_1176:HG2_PB_pbsv_13417:HG4_PB_HySA_19621:HG3_Ill_MetaSV_1213:HG3_PB_pbsv_13119:HG3_PB_HySA_20280;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8114;NumExactMatchSVs=1;ClusterMaxShiftDist=0.231355;ClusterMaxSizeDiff=0.231355;ClusterMaxEditDist=0.263238;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=17497;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=12:98886339-98886358;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1255.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:29:0|1:29:2:0:28:./.:1:4:15:0:./.:31:3:0/1:5:37:.:.:.
chr12	100688207	HG2_PB_SVrefine2Falcon1plusDovetail_2619	G	GTGACCCCCCACCTCCTCCCGGACGGGCGCTGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGCAGCTGGCCGGCAGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGCGGCTGGCCGGCGGGGCTGACCCCCCCACCTCCCTCCCGGACGAGGCGGCTGGCCGGGCAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6661:HG2_PB_pbsv_13421:HG2_PB_PB10Xdip_6426:HG2_PB_assemblyticsfalcon_6052:HG2_PB_SVrefine2Falcon1plusDovetail_2619:HG4_PB_assemblyticsfalcon_5963:HG3_PB_SVrefine2Falcon1Dovetail_8118:HG2_PB_SVrefine2Falcon1plusDovetail_2618:HG2_Ill_GATKHCSBGrefine_8995:HG4_PB_SVrefine2Falcon1Dovetail_8192:HG3_PB_pbsv_13124:HG4_PB_SVrefine2PBcRDovetail_6709:HG4_PB_pbsv_13431:HG2_PB_SVrefine2PBcRplusDovetail_2494:HG2_PB_SVrefine2PB10Xhap12_9702:HG3_PB_SVrefine2PBcRDovetail_6355;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2619:HG2_PB_assemblyticsfalcon_6052;NumExactMatchSVs=2;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.316062;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=179;DistBack=-2;DistForward=0;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=85;REFWIDENED=12:100688123-100688207;PctSeqSimilarity=0.9526;PctSizeSimilarity=0.9086;PctRecOverlap=0.9086;SizeDiff=-18;StartDistance=1;EndDistance=1;GTMatch=1;TruScore=92;MatchId=1256.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:2:24:2:22:./.:0:0:2:0:./.:2:3:./.:.:.:.:.:.
chr12	101450675	HG4_PB_SVrefine2Falcon1Dovetail_8193	T	TGGAACGTGCAGGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCAGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGAC	20	PASS	ClusterIDs=HG4_PB_HySA_19627:HG2_PB_pbsv_13422:HG4_PB_assemblyticsfalcon_5965:HG3_Ill_MetaSV_1216:HG4_PB_pbsv_13432:HG4_Ill_MetaSV_1177:HG3_PB_pbsv_13125:HG4_PB_SVrefine2PBcRDovetail_6710:HG4_PB_SVrefine2Falcon1Dovetail_8193:HG4_Ill_GATKHCSBGrefine_9284:HG3_PB_SVrefine2Falcon1Dovetail_8119:HG2_Ill_GATKHCSBGrefine_8996:HG2_PB_SVrefine2Falcon2Bionano_6662:HG3_PB_HySA_20288:HG2_PB_HySA_24483;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8996:HG3_PB_SVrefine2Falcon1Dovetail_8119:HG4_Ill_GATKHCSBGrefine_9284:HG4_PB_SVrefine2Falcon1Dovetail_8193:HG4_PB_SVrefine2PBcRDovetail_6710;NumExactMatchSVs=5;ClusterMaxShiftDist=0.142405;ClusterMaxSizeDiff=0.139241;ClusterMaxEditDist=0.236686;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=326;DistBack=536;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=12:101450676-101450693;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1257.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:0|1:27:3:1:31:1|0:0:6:26:0:0/1:30:12:0/1:10:39:.:.:.
chr12	102030827	HG3_Ill_Krunchall_18033	A	ATTCCGTCTCATGACTGAATAAATGAAGCCTTCATTCTCTTACCTTTGATATTTAGTCAAAAAATCAGTTTTACGAT	20	PASS	ClusterIDs=HG2_PB_pbsv_13423:HG2_PB_PB10Xdip_6428:HG2_Ill_breakscan11_4416:HG4_PB_SVrefine2Falcon1Dovetail_8194:HG4_Ill_svaba_16853:HG4_Ill_manta_3167:HG4_Ill_SVrefine2DISCOVARDovetail_9599:HG4_Ill_Krunchall_18695:HG4_Ill_GATKHC_21558:HG4_Ill_GATKHCSBGrefine_9285:HG4_Ill_Cortex_809:HG4_Ill_250bpfermikitraw_17837:HG4_Ill_150bpfermikitraw_17173:HG3_PB_SVrefine2Falcon1Dovetail_8120:HG3_Ill_svaba_16952:HG3_Ill_manta_3058:HG3_Ill_Spiral_14063:HG3_Ill_SVrefine2DISCOVARDovetail_9745:HG3_Ill_Krunchall_18033:HG3_Ill_GATKHCSBGrefine_8898:HG3_Ill_Cortex_856:HG3_Ill_250bpfermikitraw_17526:HG3_Ill_150bpfermikitraw_17030:HG2_PB_SVrefine2PBcRplusDovetail_2495:HG2_PB_SVrefine2PB10Xhap12_9704:HG2_PB_SVrefine2Falcon2Bionano_6664:HG2_PB_SVrefine2Falcon1plusDovetail_2621:HG2_Ill_svaba_16811:HG2_Ill_manta_3733:HG2_Ill_SpiralSDKrefine_3822:HG2_Ill_SVrefine2DISCOVARplusDovetail_2950:HG2_Ill_Krunchall_18367:HG2_Ill_GATKHCSBGrefine_8997:HG2_Ill_Cortex_1950:HG2_Ill_250bpfermikitraw_18028:HG2_Ill_150bpfermikitraw_16979:HG2_10X_SVrefine210Xhap12_9409:HG4_PB_pbsv_13433:HG4_PB_assemblyticsfalcon_5968:HG2_PB_assemblyticsPBcR_5876:HG3_PB_pbsv_13126;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9409:HG2_Ill_150bpfermikitraw_16979:HG2_Ill_250bpfermikitraw_18028:HG2_Ill_Cortex_1950:HG2_Ill_GATKHCSBGrefine_8997:HG2_Ill_Krunchall_18367:HG2_Ill_SVrefine2DISCOVARplusDovetail_2950:HG2_Ill_SpiralSDKrefine_3822:HG2_Ill_manta_3733:HG2_Ill_svaba_16811:HG2_PB_SVrefine2Falcon1plusDovetail_2621:HG2_PB_SVrefine2Falcon2Bionano_6664:HG2_PB_SVrefine2PB10Xhap12_9704:HG2_PB_SVrefine2PBcRplusDovetail_2495:HG3_Ill_150bpfermikitraw_17030:HG3_Ill_250bpfermikitraw_17526:HG3_Ill_Cortex_856:HG3_Ill_GATKHCSBGrefine_8898:HG3_Ill_Krunchall_18033:HG3_Ill_SVrefine2DISCOVARDovetail_9745:HG3_Ill_Spiral_14063:HG3_Ill_manta_3058:HG3_Ill_svaba_16952:HG3_PB_SVrefine2Falcon1Dovetail_8120:HG4_Ill_150bpfermikitraw_17173:HG4_Ill_250bpfermikitraw_17837:HG4_Ill_Cortex_809:HG4_Ill_GATKHCSBGrefine_9285:HG4_Ill_GATKHC_21558:HG4_Ill_Krunchall_18695:HG4_Ill_SVrefine2DISCOVARDovetail_9599:HG4_Ill_manta_3167:HG4_Ill_svaba_16853:HG4_PB_SVrefine2Falcon1Dovetail_8194;NumExactMatchSVs=34;ClusterMaxShiftDist=0.089172;ClusterMaxSizeDiff=0.089172;ClusterMaxEditDist=0.21118;PBcalls=12;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=76;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=12:102030828-102030829;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:1/1:3:15:3:21:1/1:1:53:0:42:1/1:0:50:./.:.:.:.:.:.
chr12	102284253	HG4_Ill_150bpfermikitraw_17174	T	TCCCTCTTTATCACCATACTGGGCTAAGCCACTGTCATAAAGAGGGTGATAAAG	20	PASS	ClusterIDs=HG3_PB_HySA_20292:HG4_PB_pbsv_13436:HG2_PB_pbsv_13426:HG3_PB_pbsv_13129:HG4_Ill_svaba_16855:HG4_Ill_manta_3168:HG4_Ill_Krunchall_18698:HG4_Ill_GATKHC_21561:HG4_Ill_GATKHCSBGrefine_9289:HG4_Ill_Cortex_810:HG4_Ill_250bpfermikitraw_17839:HG4_Ill_150bpfermikitraw_17174:HG3_Ill_svaba_16954:HG3_Ill_manta_3059:HG3_Ill_Spiral_14065:HG3_Ill_Krunchall_18036:HG3_Ill_GATKHC_21461:HG3_Ill_GATKHCSBGrefine_8902:HG3_Ill_Cortex_857:HG3_Ill_250bpfermikitraw_17528:HG3_Ill_150bpfermikitraw_17031:HG2_PB_SVrefine2Falcon2Bionano_6665:HG2_Ill_svaba_16812:HG2_Ill_manta_3734:HG2_Ill_SpiralSDKrefine_3823:HG2_Ill_SVrefine2DISCOVARplusDovetail_2952:HG2_Ill_Krunchall_18370:HG2_Ill_GATKHC_21565:HG2_Ill_GATKHCSBGrefine_9001:HG2_Ill_Cortex_1951:HG2_Ill_250bpfermikitraw_18030:HG2_Ill_150bpfermikitraw_16980:HG2_10X_SVrefine210Xhap12_9411:HG2_PB_HySA_24488:HG2_Ill_breakscan11_4417;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9411:HG2_Ill_150bpfermikitraw_16980:HG2_Ill_250bpfermikitraw_18030:HG2_Ill_Cortex_1951:HG2_Ill_GATKHCSBGrefine_9001:HG2_Ill_GATKHC_21565:HG2_Ill_Krunchall_18370:HG2_Ill_SVrefine2DISCOVARplusDovetail_2952:HG2_Ill_SpiralSDKrefine_3823:HG2_Ill_manta_3734:HG2_Ill_svaba_16812:HG2_PB_SVrefine2Falcon2Bionano_6665:HG3_Ill_150bpfermikitraw_17031:HG3_Ill_250bpfermikitraw_17528:HG3_Ill_Cortex_857:HG3_Ill_GATKHCSBGrefine_8902:HG3_Ill_GATKHC_21461:HG3_Ill_Krunchall_18036:HG3_Ill_Spiral_14065:HG3_Ill_manta_3059:HG3_Ill_svaba_16954:HG4_Ill_150bpfermikitraw_17174:HG4_Ill_250bpfermikitraw_17839:HG4_Ill_Cortex_810:HG4_Ill_GATKHCSBGrefine_9289:HG4_Ill_GATKHC_21561:HG4_Ill_Krunchall_18698:HG4_Ill_manta_3168:HG4_Ill_svaba_16855;NumExactMatchSVs=29;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.107143;ClusterMaxEditDist=0.186441;PBcalls=6;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=53;DistBack=25496;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=12:102284254-102284281;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1259.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:24:0|1:20:2:0:23:1|0:1:44:23:0:0/1:22:36:./.:.:.:.:.:.
chr12	103900704	HG2_Ill_GATKHCSBGrefine_9009	A	ATATATATATTATATTTATATTTTATATATTATATATAATTATATTTATATATTATATATAAATATATTATATTTATATATTATATATAAATATATTTATATATAATATATAAATATAATATATTTATATATTATATATAAATATATTTATATATTATATATAAATATATTATATTTATATATTATATATAAATATATTATATTTATATATTATATATAAATATAATATATTTATATATATATTATATTTATATATTATATATAAATATATATATTATATT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2499:HG2_PB_pbsv_13430:HG3_Ill_GATKHCSBGrefine_8906:HG3_Ill_GATKHC_21479:HG2_PB_PB10Xdip_6431:HG3_Ill_GATKHC_21478:HG4_Ill_GATKHC_21579:HG2_Ill_GATKHC_21579:HG2_Ill_GATKHCSBGrefine_9009:HG4_PB_pbsv_13439:HG2_PB_SVrefine2Falcon1plusDovetail_2624:HG3_PB_pbsv_13135:HG3_PB_SVrefine2Falcon1Dovetail_8125:HG4_PB_SVrefine2PBcRDovetail_6714:HG4_PB_SVrefine2Falcon1Dovetail_8197:HG3_PB_SVrefine2PBcRDovetail_6360:HG2_PB_SVrefine2PB10Xhap12_9710:HG2_PB_SVrefine2Falcon2Bionano_6669:HG2_Ill_SVrefine2DISCOVARplusDovetail_2958;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9009:HG2_Ill_GATKHC_21579:HG4_Ill_GATKHC_21579;NumExactMatchSVs=3;ClusterMaxShiftDist=0.17795;ClusterMaxSizeDiff=0.174081;ClusterMaxEditDist=0.252874;PBcalls=12;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=280;DistBack=-1;DistForward=52401;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=288;REFWIDENED=12:103900595-103900882;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:63:1/1:2:15:0:17:./.:0:1:0:0:1/1:0:24:./.:.:.:.:.:.
chr12	103953106	HG3_Ill_SVrefine2DISCOVARDovetail_9751	A	ATGAAGTGTGCCCATGTGACGCCACTGGAGGAGGACACCTGGAAACTTGGGCCTGTTT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_16994:HG3_PB_pbsv_13136:HG2_PB_HySA_24500:HG3_PB_HySA_20304:HG2_PB_SVrefine2PB10Xhap12_9711:HG2_PB_SVrefine2PBcRplusDovetail_2500:HG2_PB_SVrefine2Falcon2Bionano_6670:HG2_PB_pbsv_13431:HG3_Ill_svaba_16964:HG3_Ill_SVrefine2DISCOVARDovetail_9751:HG3_Ill_Krunchall_18049:HG3_Ill_GATKHC_21480:HG3_Ill_GATKHCSBGrefine_8907:HG3_Ill_250bpfermikitraw_17541:HG3_Ill_150bpfermikitraw_17045:HG2_Ill_svaba_16825:HG2_Ill_manta_3737:HG2_Ill_SVrefine2DISCOVARplusDovetail_2959:HG2_Ill_Krunchall_18386:HG2_Ill_GATKHC_21580:HG2_Ill_GATKHCSBGrefine_9010:HG2_Ill_250bpfermikitraw_18046;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16994:HG3_Ill_svaba_16964:HG3_Ill_SVrefine2DISCOVARDovetail_9751:HG3_Ill_Krunchall_18049:HG3_Ill_GATKHC_21480:HG3_Ill_GATKHCSBGrefine_8907:HG3_Ill_250bpfermikitraw_17541:HG3_Ill_150bpfermikitraw_17045:HG2_Ill_svaba_16825:HG2_Ill_manta_3737:HG2_Ill_SVrefine2DISCOVARplusDovetail_2959:HG2_Ill_Krunchall_18386:HG2_Ill_GATKHC_21580:HG2_Ill_GATKHCSBGrefine_9010:HG2_Ill_250bpfermikitraw_18046;NumExactMatchSVs=15;ClusterMaxShiftDist=0.266667;ClusterMaxSizeDiff=0.247619;ClusterMaxEditDist=0.365385;PBcalls=7;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=52401;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=12:103953107-103953164;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:35:./.:7:12:6:17:./.:10:0:1:17:0/1:16:24:./.:.:.:.:.:.
chr12	103954145	HG4_Ill_Krunchall_18713	A	ACTAGCCAAGTGGGGCACACATGGGGCAAGAGACAGTGGATGCAAGATCAGCTTG	20	PASS	ClusterIDs=HG2_PB_HySA_24501:HG3_PB_pbsv_13137:HG2_PB_PB10Xdip_6432:HG2_PB_pbsv_13432:HG2_Ill_breakscan11_4418:HG4_PB_assemblyticsfalcon_5981:HG4_Ill_svaba_16866:HG4_Ill_scalpel_12416:HG4_Ill_manta_3170:HG4_Ill_Krunchall_18713:HG4_Ill_GATKHC_21580:HG4_Ill_GATKHCSBGrefine_9296:HG4_Ill_Cortex_811:HG4_Ill_250bpfermikitraw_17852:HG4_Ill_150bpfermikitraw_17191:HG3_Ill_svaba_16965:HG3_Ill_scalpel_12971:HG3_Ill_manta_3062:HG3_Ill_Spiral_14074:HG3_Ill_Krunchall_18050:HG3_Ill_GATKHC_21481:HG3_Ill_GATKHCSBGrefine_8908:HG3_Ill_Cortex_858:HG3_Ill_250bpfermikitraw_17542:HG3_Ill_150bpfermikitraw_17046:HG2_PB_assemblyticsfalcon_6068:HG2_PB_assemblyticsPBcR_5892:HG2_Ill_svaba_16826:HG2_Ill_scalpel_12715:HG2_Ill_manta_3738:HG2_Ill_SpiralSDKrefine_3828:HG2_Ill_Krunchall_18387:HG2_Ill_GATKHC_21581:HG2_Ill_GATKHCSBGrefine_9011:HG2_Ill_Cortex_1956:HG2_Ill_250bpfermikitraw_18047:HG2_Ill_150bpfermikitraw_16995:HG3_PB_HySA_20305;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16995:HG2_Ill_250bpfermikitraw_18047:HG2_Ill_Cortex_1956:HG2_Ill_GATKHCSBGrefine_9011:HG2_Ill_GATKHC_21581:HG2_Ill_Krunchall_18387:HG2_Ill_SpiralSDKrefine_3828:HG2_Ill_manta_3738:HG2_Ill_scalpel_12715:HG2_Ill_svaba_16826:HG2_PB_assemblyticsPBcR_5892:HG2_PB_assemblyticsfalcon_6068:HG3_Ill_150bpfermikitraw_17046:HG3_Ill_250bpfermikitraw_17542:HG3_Ill_Cortex_858:HG3_Ill_GATKHCSBGrefine_8908:HG3_Ill_GATKHC_21481:HG3_Ill_Krunchall_18050:HG3_Ill_Spiral_14074:HG3_Ill_manta_3062:HG3_Ill_scalpel_12971:HG3_Ill_svaba_16965:HG4_Ill_150bpfermikitraw_17191:HG4_Ill_250bpfermikitraw_17852:HG4_Ill_Cortex_811:HG4_Ill_GATKHCSBGrefine_9296:HG4_Ill_GATKHC_21580:HG4_Ill_Krunchall_18713:HG4_Ill_manta_3170:HG4_Ill_scalpel_12416:HG4_Ill_svaba_16866:HG4_PB_assemblyticsfalcon_5981;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0892857;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.192982;PBcalls=8;Illcalls=30;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=29;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=999;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=60;REFWIDENED=12:103954110-103954169;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:1:16:0:23:1/1:1:24:1:18:1/1:1:65:./.:.:.:.:.:.
chr12	103994629	HG2_Ill_Krunchall_18388	A	ATGGATGGCAGAGCACTTGTTTCAAAGCGGAGGATGTGTTGGGGCACTTCTTCAGAAATAAGCACTAAAGTCGGCCCC	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_5893:HG2_PB_PB10Xdip_6433:HG4_Ill_manta_3171:HG4_Ill_GATKHC_21581:HG4_Ill_GATKHCSBGrefine_9297:HG2_Ill_GATKHC_21582:HG2_Ill_GATKHCSBGrefine_9012:HG4_Ill_Cortex_812:HG2_Ill_manta_3739:HG2_Ill_SpiralSDKrefine_3829:HG2_Ill_Cortex_1957:HG2_PB_pbsv_13433:HG4_Ill_svaba_16867:HG4_Ill_Krunchall_18714:HG4_Ill_250bpfermikitraw_17853:HG4_Ill_150bpfermikitraw_17192:HG2_Ill_svaba_16827:HG2_Ill_Krunchall_18388:HG2_Ill_250bpfermikitraw_18048:HG2_Ill_150bpfermikitraw_16996;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16996:HG2_Ill_250bpfermikitraw_18048:HG2_Ill_Krunchall_18388:HG2_Ill_svaba_16827:HG4_Ill_150bpfermikitraw_17192:HG4_Ill_250bpfermikitraw_17853:HG4_Ill_Krunchall_18714:HG4_Ill_svaba_16867;NumExactMatchSVs=8;ClusterMaxShiftDist=0.2125;ClusterMaxSizeDiff=0.175;ClusterMaxEditDist=0.324324;PBcalls=3;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=77;DistBack=40458;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=12:103994628-103994630;PctSeqSimilarity=0.9518;PctSizeSimilarity=0.9059;PctRecOverlap=0.9059;SizeDiff=-8;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=92;MatchId=1263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:32:0|1:33:1:3:27:1|0:1:28:25:0:0/1:34:15:./.:.:.:.:.:.
chr12	104162273	HG2_PB_SVrefine2PB10Xhap12_9712	A	AGGGAGGGGGAGGGAAAGATGGAGAGATGGGAGAGAGAGGGAGAGGGGGAGAGGGAGGGAGGCGGAGGGAGAGAGAGGGAGGGGGAGGGGAGGGAGGGAGAGGGAAAGGGGGAGGGAGGGGGAGAGGGGGGACAGGGAGGGAGGGAGAGGGAGGGGTAGGGGAGAGGGGGGACAGAGAGGGAGGGGGAGGGGGGAGGGAGAGGGACAGGGACAGGGAGAGGGAGAGAGAGGGAGGGAGAGGGACAGGGAGAGGGAGAGAGAGGGAGGGAGAGAGGGAGAGGGAGGGGAGGGGGAGAGGGAGGGGAGGGGGAGAGGGGGGAGAGAGAGGGAGGGGGCGGGAGGGGAGGGAGAGGGACAGGGAGAGGGAGGGAGAGGGAGGGAGAGGGAGGGAGAGGGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGGGAGAGGGAGAGGGAGGGAGGGGGGAGGGAGAGAGATGGGGGAGGGGGAGGGAGAGGGATGGGGGAGGGAGAGGGATGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2626:HG2_PB_HySA_24505:HG2_PB_PB10Xdip_6434:HG2_PB_pbsv_13436:HG4_PB_SVrefine2Falcon1Dovetail_8198:HG4_PB_pbsv_13443:HG4_PB_SVrefine2PBcRDovetail_6715:HG2_PB_SVrefine2Falcon2Bionano_6671:HG2_PB_SVrefine2PBcRplusDovetail_2501:HG2_PB_SVrefine2PB10Xhap12_9712:HG3_PB_SVrefine2Falcon1Dovetail_8127;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9712:HG2_PB_SVrefine2PBcRplusDovetail_2501;NumExactMatchSVs=2;ClusterMaxShiftDist=0.107356;ClusterMaxSizeDiff=0.107356;ClusterMaxEditDist=0.219758;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=504;DistBack=18653;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=152;REFWIDENED=12:104162274-104162425;PctSeqSimilarity=0.9758;PctSizeSimilarity=0.973;PctRecOverlap=0.7765;SizeDiff=-14;StartDistance=-109;EndDistance=-109;GTMatch=1;TruScore=90;MatchId=1264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:30:1/1:0:13:0:6:./.:0:1:0:3:./.:0:0:./.:2:23:.:.:.
chr12	104278787	HG3_Ill_SVrefine2DISCOVARDovetail_9752	A	GATGATAGACTAAATGGCCAATGTTTATGTAGTGCTAGATTGGTGGGCTAGATTATGCTGTACTGAAAGACAACCCCCAAATATGATGTGAGGAATGGTTTGACCCCAGCATCATCTTTATACACATTGCCGCACTCG	20	PASS	ClusterIDs=HG3_PB_HySA_20309:HG3_PB_pbsv_13140:HG3_PB_SVrefine2Falcon1Dovetail_8128:HG4_PB_SVrefine2PBcRDovetail_6716:HG4_Ill_SVrefine2DISCOVARDovetail_9611:HG3_PB_SVrefine2PBcRDovetail_6363:HG3_Ill_SVrefine2DISCOVARDovetail_9752:HG2_PB_HySA_24506:HG3_Ill_MetaSV_1219:HG4_PB_pbsv_13444:HG4_PB_HySA_19649;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_9752:HG3_PB_SVrefine2PBcRDovetail_6363:HG4_Ill_SVrefine2DISCOVARDovetail_9611:HG4_PB_SVrefine2PBcRDovetail_6716;NumExactMatchSVs=4;ClusterMaxShiftDist=0.114865;ClusterMaxSizeDiff=0.110345;ClusterMaxEditDist=0.304054;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=137;DistBack=13;DistForward=21;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=139;REFWIDENED=12:104278730-104278868;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9927;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:33:0|1:27:2:1:36:./.:14:0:3:24:0/1:22:25:./.:.:.:.:.:.
chr12	105438378	HG2_Ill_GATKHCSBGrefine_9017	G	GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCGCTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAGTGGGAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8202:HG2_PB_assemblyticsPBcR_5909:HG4_Ill_GATKHCSBGrefine_9300:HG2_Ill_GATKHCSBGrefine_9017:HG2_PB_SVrefine2PBcRplusDovetail_2504:HG2_PB_HySA_24533:HG4_PB_HySA_19660:HG2_PB_SVrefine2PB10Xhap12_9716:HG2_PB_PB10Xdip_6438:HG2_PB_pbsv_13445:HG4_PB_pbsv_13450:HG2_PB_SVrefine2Falcon1plusDovetail_2630:HG2_PB_assemblyticsfalcon_6082:HG4_PB_assemblyticsfalcon_6000:HG2_PB_SVrefine2PBcRplusDovetail_2503;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9017:HG4_Ill_GATKHCSBGrefine_9300;NumExactMatchSVs=2;ClusterMaxShiftDist=0.18543;ClusterMaxSizeDiff=0.183028;ClusterMaxEditDist=0.236273;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=308;DistBack=-492;DistForward=0;DistMin=-492;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=12:105438379-105438378;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1266.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:56:0|1:44:3:1:49:1|0:0:9:31:0:0/1:31:9:0/1:9:32:.:.:.
chr12	106603651	HG4_Ill_SVrefine2DISCOVARDovetail_9621	A	ATTTTAGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATACATTTCCCTCTAAATACTGCTTTAAATGTGTCCCAGAGATTCTGGTACATTGTGTCTTCATTCTCATTGGTTTCAAAGAAAACCTTTATTTCTGCCTTCATTTCGTTATTTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGTGTGGTTTTGAGTGACTTTCTTAATCTTGAGTTCTAATTTGATTGCACTGTGGTCTGAGAGACTGTTGGTTATGATTTCCGTTCT	20	PASS	ClusterIDs=HG4_PB_pbsv_13457:HG4_PB_assemblyticsfalcon_6014:HG2_PB_assemblyticsPBcR_5921:HG2_PB_PB10Xdip_6441:HG3_PB_pbsv_13145:HG2_PB_pbsv_13450:HG4_PB_SVrefine2Falcon1Dovetail_8206:HG4_PB_SVrefine2PBcRDovetail_6722:HG4_Ill_svaba_16898:HG4_Ill_manta_3173:HG4_Ill_SVrefine2DISCOVARDovetail_9621:HG4_Ill_MetaSV_1181:HG4_Ill_GATKHCSBGrefine_9306:HG3_PB_SVrefine2PBcRDovetail_6366:HG3_Ill_svaba_16982:HG3_Ill_manta_3063:HG3_Ill_SVrefine2DISCOVARDovetail_9762:HG3_Ill_MetaSV_1223:HG3_Ill_GATKHCSBGrefine_8911:HG2_PB_SVrefine2PBcRplusDovetail_2507:HG2_PB_SVrefine2PB10Xhap12_9718:HG2_PB_SVrefine2Falcon2Bionano_6677:HG2_Ill_svaba_16853:HG2_Ill_SVrefine2DISCOVARplusDovetail_2967:HG2_Ill_MetaSV_1108:HG2_Ill_GATKHCSBGrefine_9021:HG2_10X_SVrefine210Xhap12_9427:HG3_PB_SVrefine2Falcon1Dovetail_8136:HG2_PB_SVrefine2Falcon1plusDovetail_2633;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9427:HG2_Ill_GATKHCSBGrefine_9021:HG2_Ill_MetaSV_1108:HG2_Ill_SVrefine2DISCOVARplusDovetail_2967:HG2_Ill_svaba_16853:HG2_PB_SVrefine2Falcon2Bionano_6677:HG2_PB_SVrefine2PB10Xhap12_9718:HG2_PB_SVrefine2PBcRplusDovetail_2507:HG3_Ill_GATKHCSBGrefine_8911:HG3_Ill_MetaSV_1223:HG3_Ill_SVrefine2DISCOVARDovetail_9762:HG3_Ill_manta_3063:HG3_Ill_svaba_16982:HG3_PB_SVrefine2PBcRDovetail_6366:HG4_Ill_GATKHCSBGrefine_9306:HG4_Ill_MetaSV_1181:HG4_Ill_SVrefine2DISCOVARDovetail_9621:HG4_Ill_manta_3173:HG4_Ill_svaba_16898:HG4_PB_SVrefine2PBcRDovetail_6722;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0554593;ClusterMaxSizeDiff=0.0554593;ClusterMaxEditDist=0.172881;PBcalls=14;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=286;DistBack=-40;DistForward=1;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=12:106603652-106603654;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:0:21:1:15:./.:0:2:0:4:1/1:0:46:./.:.:.:.:.:.
chr12	106666206	HG3_Ill_MetaSV_1224	T	TTGTTCCTGGGAAGCTTTTAAAAAACAGATGAGTTGGCCGGGCACGGTGGCTCACGCCTCTAATCCCAGCACTTTGGGAGGCGGAAGCAGGCAGAACACGAGGTCAGGAGCTCAAGACCAGCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAAATATAAAAATTAGCCAGGCGTGGTGGTGCGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGTACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATGACGCCAC	20	PASS	ClusterIDs=HG2_PB_pbsv_13452:HG4_PB_assemblyticsfalcon_6016:HG3_PB_pbsv_13147:HG4_PB_pbsv_13459:HG4_Ill_MetaSV_1182:HG4_PB_HySA_19676:HG4_Ill_GATKHCSBGrefine_9308:HG4_PB_SVrefine2Falcon1Dovetail_8208:HG3_Ill_manta_3064:HG3_Ill_MetaSV_1224:HG3_Ill_GATKHCSBGrefine_8913:HG2_Ill_SVrefine2DISCOVARplusDovetail_2969:HG2_Ill_MetaSV_1109:HG2_Ill_GATKHCSBGrefine_9023:HG2_10X_SVrefine210Xhap12_9429:HG2_PB_SVrefine2Falcon1plusDovetail_2635:HG3_PB_SVrefine2Falcon1Dovetail_8138:HG2_PB_HySA_24555;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9429:HG2_Ill_GATKHCSBGrefine_9023:HG2_Ill_MetaSV_1109:HG2_Ill_SVrefine2DISCOVARplusDovetail_2969:HG3_Ill_GATKHCSBGrefine_8913:HG3_Ill_MetaSV_1224:HG3_Ill_manta_3064;NumExactMatchSVs=7;ClusterMaxShiftDist=0.104505;ClusterMaxSizeDiff=0.0972973;ClusterMaxEditDist=0.294221;PBcalls=9;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=276;DistBack=34901;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=12:106666207-106666209;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1268.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:28:0|1:20:3:2:24:1|0:0:19:26:0:0/1:31:10:./.:.:.:.:.:.
chr12	106890946	HG3_PB_SVrefine2Falcon1Dovetail_8139	T	TGTGTTAGCGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1225:HG3_PB_pbsv_13148:HG2_PB_pbsv_13453:HG4_PB_pbsv_13460:HG4_PB_HySA_19679:HG3_PB_HySA_20332:HG2_PB_SVrefine2Falcon2Bionano_6679:HG4_PB_SVrefine2Falcon1Dovetail_8209:HG3_PB_SVrefine2Falcon1Dovetail_8139:HG3_PB_SVrefine2PBcRDovetail_6368:HG4_PB_SVrefine2PBcRDovetail_6724:HG2_PB_SVrefine2Falcon1plusDovetail_2636;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8139:HG4_PB_SVrefine2Falcon1Dovetail_8209;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0854962;ClusterMaxSizeDiff=0.0824427;ClusterMaxEditDist=0.169139;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=323;DistBack=-3;DistForward=-1;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=12:106890947-106890961;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:39:0|1:33:1:0:40:0|1:9:0:0:6:0/1:27:9:0/1:12:29:.:.:.
chr12	107122080	HG2_PB_pbsv_13454	A	AAATAGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTCGCTTGTCGCCCAGGCTGGAGTGGGCAGTGGCGGGATGCTCGGCTTCACTGCAAGCCCGCCCTCCCGGTTCACGCGCATTCTCACTGCCTCAGCCTCCCAAGTAGCTTGGGACTACCAGGAGCCCGCCAACTACGCCCGCTAATTTTTGTATTTTTGTAGGGACGGGGTTTCACCATTTTAGCGGGATGGTCTCGATCTCCTGACGTCGTATCCGCCCGCCTCGGCCTCGCCAAAGTGGCTGGGATTACAGGCGTGAGCCACCAGGGCCCGGCCCCTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4419:HG3_PB_pbsv_13149:HG2_PB_pbsv_13454:HG3_PB_SVrefine2Falcon1Dovetail_8140:HG2_PB_SVrefine2Falcon1plusDovetail_2637:HG3_PB_HySA_20333;NumClusterSVs=6;ExactMatchIDs=HG2_PB_pbsv_13454;NumExactMatchSVs=1;ClusterMaxShiftDist=0.167722;ClusterMaxSizeDiff=0.164557;ClusterMaxEditDist=0.196203;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=-6;DistForward=37126;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=12:107122081-107122080;PctSeqSimilarity=0.9527;PctSizeSimilarity=0.9724;PctRecOverlap=0.9694;SizeDiff=9;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=96;MatchId=1270.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:22:0|1:23:1:0:25:./.:1:6:32:0:0/1:23:10:0/1:18:17:.:.:.
chr12	107675349	HG2_PB_PB10Xdip_6473	T	AAAACACAATCATGGAGCCCGTCCGCCATGTGGCCGCGGCTGGTGTTGGCGCGGCTGCGCTGCGCCCGGGCAGTGCGGAGCCGGGACAGTCGCGGCGCTGACGCCCGCGGCCCCAGCTGCAGATATGAAGCGGAGCCGCTGCCGCACGACCGCAGCCGCCGCCGCCCGACCGCCGGAGATGGAGTTCAGCGGGCAGCGAGCTGTCTCAGTCTTGCCGCCGCGCCGGCGAGCGCCGCCCGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGCGGGGCCCGAGGGCAAGGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCGATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCACCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCAGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGTGCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGGCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGGTCAGCCCCCCACCTGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGGTCAGCCCCCCACCTGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGTGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCATCTGGGAGGGAGGTGGGGGGGGTCGGCCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGTGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTGGTCAGCCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCGGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCGCCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGCGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAATAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAATAAATAAATAAAAGCTTCCCCTACTTCTTTATGTTATTCCATCTTAAAAGCCATATCACATGTATGATTTTTATTTTATTTCAAATCTCTTTTGAAAGCTGAAGGAGGACTGTAAATGATAAATAACCAAGGAAAATGTCCTTACAATCTCCTAACAATATTTTCTTAATGTTTAGAAGAAGCGATTAAGCATTCGATTAAAGAGAATTTTGAAATAGAGAGGTGAGGCAATGTGAATAGGATCTTTTGAAGGTGGCATGTGATGTTTCCTTCCAGGGTTTATTATGAAAATAACTATGAGTTGCTTTTTTTTTTTCTTCTTGAGATGGAATCTTGCCCTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGAAACCTCCCCCTCCCGGGTTTAAGCAATTCTCCTGTCTCATCCTCCCCAGTAGCTGGGACTACAGACACACGCCACCACGCCCGGCTATTTTTTGTATATTTAGTAGAGATGGGGTTTCACCATAATGGTCAGGCTGGTCTCAAACTCCTGACCTCAAATGATCCACCCGCTTCGGCCTCCCAAAGTGCTGAGATTGCAGGTGTGAGCCACTGCGCCCAGCTGACTGTGAGTTCTTTGAGGGCTGGACCTAACTAAATGCCCATCTCACATATGCAGAACGTCTAGGCGGCAGAGGCAAACAAGCAATCAATTGTCACAAATAAAAGGCATCAAGATGGTTTCCTTTTCCCTAGAAAAAAGATTGAGTTGCATCTAACAAGTGTGGGCAAAGAAGGGGAGGAAGAGACTGAACATGTACGAATAGAACCTGCCGACTGCATTTCTTGTCATTCCCCATTTTCCACCCCAGAGTGGCATCTTCCTGAAGACATTTCAAAGCACAAATTTTATGTATAAGGAGAATAAATGAATACAATGTATTCCCCAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_6473:HG3_PB_HySA_20338:HG2_PB_HySA_24561:HG2_PB_SVrefine2PBcRplusDovetail_2510:HG4_PB_SVrefine2Falcon1Dovetail_8210:HG3_PB_SVrefine2Falcon1Dovetail_8141:HG2_PB_SVrefine2Falcon1plusDovetail_2638:HG2_PB_SVrefine2PB10Xhap12_9723:HG2_PB_HySA_24560;NumClusterSVs=9;ExactMatchIDs=HG2_PB_PB10Xdip_6473;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0193896;ClusterMaxSizeDiff=0.0193896;ClusterMaxEditDist=0.0386137;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=4197;DistBack=2844;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:107675350-107675348;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9962;PctRecOverlap=0.9962;SizeDiff=-16;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1271.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:33:0|1:35:0:0:20:./.:38:0:3:10:0/1:21:9:0/1:152:247:.:4278:.
chr12	108308064	HG2_10X_SVrefine210Xhap12_9432	G	GTGGTCTCGCTGAGTTCAGGAGTGAAGTCGCAGACCTTCACAGTGAGTGTTATAGCTCTTAAAGGTGAGGCATCCAGAGTTGTTTGTTTCTCCCGGTGGGTTCGTGGTCTCGCAGACTTCAGGAATGAAACCACAGACCCTGCGGTGAGTGTTATAGCTCATAAAGGTAGTGCAGACCCAAACAGTGAGCAGCAGCAAGATTTACTGTGAAGAGTGAAAGAACAAAGCTTCCACAGCGTGGAAGGGGACCCAAGTGGGTTGCCGGGCTGGCTCGGGTGGCCAGCTTTTATTCCCTTATTTGGCCCCACCCACGTCCTGCTGATTGCTCCATTTTACAGAGCGCTGATTCGTCCATTTAAAGAGTGCTGATTGGTCTGTTTTACAGAGTGCTGATTGGTGCATTTACAAACCTTTAGCTAGACCACAGGGTGCTGATTGGTGTGTTTTTACAGAGTGCTGATTGGTGCGTTTACAAACCTTTAGCTAGACATAGAGTGCTGATTGGTGTGTTTTTACAGAGTGCTGATTGGTGCGTTTACAAACTTTTAGCTAGACCACAGGGTGTTGATTGGTGTGTTTTTACAGAGTGCTGATTGGTGCGTTTACAAACCTTTAGCTAGACACAGCGCTGATTGGTGTGTTTTTACAGAGTGCTGATTGGTGCGTTTACAAACCTTTAGCTAGACACAGAGTGCTGATTGGTGCATTTACAATCCTCTAACTAGACAGAAAAGTTCTCCAAGTCCCCACTCCACCCAGGAAGTCCAGGTGGCTTCACCTCTCACTGAGATCAGGAGGTGCTGACTGCCTGGGGTCAGGGATGGGAAGCTTGGGCTGAGCCTGAGGGGTCCTGGAGCCTGAGACTAACTATTTTCTAAAAGAAATGGCAAATACAACCATTATTTGTTGTTTTTTTTTCCTTTATTAAGTAAGCAATGAATGTTCTTAGTAGAAAGTGTAGAAATTGCAGATGCATGAAATGAACTAAATGAAACCATTCCACAAAAATAATCCCCAAACCAAGGGACCCTTACCATTTGTATTTGAGTAGGCCTCATTCATGTCTTATGTCTACATGAGCCCCCTCCCCATTATCCCATAGGAAAGAGAGAATGAGTCCTTAAAAAGTTGTTCATGGGGTAAGGGTTTCTCTCAACTTCATTTTGAATTGCAAAAGGAAGTTTAGAGAAGATGCATGGGCTTTAAAGGACCTCTATTAACATGAATACTGGGACCTAAAGAGGTGTCCCAGGAAACCAGGAAAACAAGTGGTAAAGAAATTGGACTCAGACTTAGCAATTATTCCTTGGAAGATGACCTTACACTTACATGCATGGATGGGGATGTATACAGTGTTTTTACAGTTACTTAAAAGAAGAATCTCACATTGATATTGTGGAGGTTTCACACTTAAAGGATTAATTTAGAAATGTCCTAATGCCACATGAATCCCTCGCTGTGGTCAAGAGTTTCCTGATTCAAGGCTTCTGTTTCTCCCTCCGCTTAGATGAAAGAAAAGATGTGAAGCCCTGGAAAACTTGGCTTTGAAGATGCCAAACTCGCTTTAGAGAAGAGAAAGGCATTACTGTTGGAGATGCTTGTGAAGAATTTGAGTTAAAAAAATTGTTTTCTAACCAAATACCACATGTTCTCACTTATAAGTGGGAGCTAAACATGGAGCATCTGTGGACATAAACATGGGAACAATGGATACTGCAGACTACTAGAGCGGGGAGGGAGGGAGGGAAGGAGGGGGATGGGGGTTGAAAAAGTACCAGTTGGGTACTAGCCTCAATACCTGGGTGCAATGTACCCATGTCACAATCTGCACATATGCCCCCTGTATCTAAAATAAAAGTTGAAATTAAAAATGAATAAATGAATAAAAGATGGTTGGCTGTCTCTGTGAAAAAACTAAATTGTTTTCCTGCTGGGTGCGGTGGCTCACGCCTGTAATCCCAGGTGTTTGGGATGCCGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGATGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGTATGGTGGCGTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGACCCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGCTACACTGTACTCCAGCCTGGGCAACAGAGTGAAACTCTGCTTCAAAAAAAAAAAAATGTTTTCTAATGTGAAAGAAACCAGCAATACTCATAAAATATATCATATAGATAGATAGTTGCATCTAAACTAGTATTATAAGTACATATTTGTTTTCCCTAAAAGCTTATATAATCTGGACAACCCCAGCATTTCTGTTCACTCACTGGGACATATTTTTTTTTTAATTTTTGCACTGGGAAAATTGATTCGGGCATTAGTGGTATGTACATTCCAATGTAATTCCCATTGACTTGGGCATTAGTGGTATGTATATTCATATTTTAAAAAATCTGGAGTATTTTATACATGCTCTTTGATAATCTATTTTTAAACAATACATTTTAGATTATGTTAGTACACCTTTATGATGATCCATTTCCACTTAATGAATAGTAAATATATTTTTTCTTCCTTATGATTTTAATGTTTTCTTTTTTCTAGCTTACTTTATTGTAAGAATACAGTATCTAATACATATAACATACAAAATATGTGTTAATCGATTGTTTATATTATCAATAGGCTTCCAGTCAATAGTAGGCTATTAGCTGTTACATTTCCAAAAACATAGTCAAACATTGTATGAGGATTTTCAGCTGCACGGGGTGTTGGTGCTCCAACCCCTGCACCGTGCAAGGTCAATTGTATATCTATGTCATAGTTTTTATGATCTACACAGTATAAGAATATCATATTGTGGTTTTGTTTTTGCTTTTGTTTTAAAAGACAGGGTGTTGCTGTATCACACAATCTGAAGTGTGGTGGCACCATCATAGCTCACTGTAACCCCAAACTCCTGGGCTGAAGTGATCTTCCCACTTCAGCCTCCTGAGTAGCTAGGACTACAAGGGTGTGCCACCATGCTTGGATAATTAAAAAAAAATTTTTTTAGTAGAGACAGGATCTTGCCGTGTTGCCCAGGCTGTTCTCAGACTCCTGACCTCAAGTGATCTTCCTACCTCTGCCTCCCAAAGCACTGGGATTACAGGTGTGAACCATCCATGCCTGGCCCAAAAATTGTATACTCAAAATTATTGAATGCTTTTCTTATCTCTTTTATGTCGTGTGTGCATGTGTGTGTTTGTGTGTGCATGTGTGTGTGTGTGTGTTTGTAAGCCACATGCTATGAAAAGCTTTCAGCATAGTCTACTGGGCCTGGAGTTCTAGCCCTGGCCTGGCTCTGCAGCTTCACATGTCATGGGCTGCCCCCACCTCCTCACTGGCTGATGTCTTTCCACTCCATGTGCTTTTCTGTCACTCCGCCTTTTTCTGTCACCCCTCCTGTCCCTGCTTCCCCTCTAGGCTGAGAGCCCCCAGGGGCCCCACTTATGCACCACTGTATCCCCAGTGCCTGCTGCAGGCCTGGCATCTGGGAGGTGCTTATTCAATGGTTTTTGAATGAATATGTGTGAATGATGAGGCCTGAGAAAGAAAATCAGCCCCTGACATCCAGAAATGGGTCTGATGACCAGAAACAGGCCATTATCATTGTCGCTTTATTGGAGATAAGTAACCTCACGGAACATCAACATTAGACAAGGTACTCTGAGACTGTGATAAAATGTGAAATAAAAACAAGGTTCCTGTGCAGCTTCCAAAATTCCAATATCTTTGTTCCTTGTGGAGGGCTGGGTGGCTGCTGCTTCTTTACCAGTCAGAACTTTATTCTCACTCGAGTGAGCCTCCCCTTACGTACAATGTGCTGAGACACTTAATTGTATAATTGTCCCCACATTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4420:HG3_PB_SVrefine2Falcon1Dovetail_8144:HG2_PB_pbsv_13457:HG2_PB_PB10Xdip_6474:HG3_PB_SVrefine2PBcRDovetail_6369:HG4_PB_SVrefine2Falcon1Dovetail_8212:HG2_PB_SVrefine2Falcon1plusDovetail_2639:HG2_PB_SVrefine2PB10Xhap12_9724:HG2_Ill_SVrefine2DISCOVARplusDovetail_2973:HG2_10X_SVrefine210Xhap12_9432:HG2_PB_SVrefine2PBcRplusDovetail_2511:HG2_PB_SVrefine2Falcon2Bionano_6680:HG4_Ill_SVrefine2DISCOVARDovetail_9632:HG4_PB_SVrefine2PBcRDovetail_6727:HG4_PB_HySA_19688;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9432:HG2_Ill_SVrefine2DISCOVARplusDovetail_2973:HG2_PB_SVrefine2PB10Xhap12_9724;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0712329;ClusterMaxSizeDiff=0.0712329;ClusterMaxEditDist=0.110336;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=3941;DistBack=55639;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=12:108308065-108308067;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1272.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:2:17:0:12:./.:0:4:0:6:1/1:0:52:1/1:1:465:.:3993:.
chr12	108972358	HG2_PB_SVrefine2PBcRplusDovetail_2513	C	CCATTATCATCACCACCACCATCACCACCACCATCACCATCACCATCACCACCACCACCATCACCACCACCACCACCATCACCACCATCACCACCACCATCACCATCACCACCATCACCATCACCACCATCATCACCACCCCATTATCACCACCCCCATTATTACCACCACCACCATCACCACCCCCATTATCACCACCCTATCAACACCACCACCACCACCCCCATCACCACCACCACCACCACCATCACCATCACCACCACCATCACCATCACCATCACTACCACCACCACCACCACCATTACCACCATCACCACCACCATCACCATCACTACCATCATCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCATCACCACCATCACCACCACCACCACCATCACCACCACCATCACCATCAGCATCACCACCACCACCACCACCATTACCACCCCCATTATCACCACCACCACCATCACCACCCCCATTATCACCACCCTGATTATCAACACCACCACCATCACCATCATAATTGTTACAGGGTGGATTCCCCAGGAACTTGATCCTGAGATGGAGATTAGCAGGGAGGTGTTTATTTGGGAATGTTCCTGGGATCAGCACCTATGGAAGGGGGTTAAGAAACCAGGATTGGGCAGAGGGAGGAGACAGGATGCAGTGTAGTCCCAACAAAGGCTTCGGTCAACACCATGGGGAGCTCTAACTCAGATGGTCCCTCCAAGTTGTCCTGCACTGGGGCCTCTATCACTTACAACCTATAAAGTTTATCACTCTATTGGGTTCAGGACATCATCTTCCCACTCTTTTTCCAAAGGAGATTTGCACTTTACAAGAGGAGGAGCTAAGGACAATGCTTACACCAACGAATAAACCACTGGAATTCCAGGCATCTGTTGGGCTCACTGGGGGCAAAGAGTTTGTGGGAGCTTCTCACACTGTTTCATTGGCCCTTCAACCCCAGAATCTTGCTCACTTTCCCACAATAGCAGGGCCCCTGGGGACCACCTCCCATCAAGGGGGTGTTCATCCACTCCAACCCCCAATGACTCTGGACAGGGTAGCCCTTCTTCCTGGCAAAAACTGCTTGAGCAGTCACCAGGCTGTGAGTCTCCTCTTGTCTGTTCCCATCCTTTTTCTCCAAAGCTGACGCAGAGGACAAAATGCTGGTATGGGTAAGTCCCTCTCTGGCTGAGTTAACTGAGCCGAGGGCCTCAAGAGAGAGAGCCTGGGTCAAGGATGCCTGCACTGAGTGCCTGCAGGCAAGCACGGGCCTCTCTCACTTGTCCTTCTTGCTTGGACAACCCAAGGGGTTGTTTGCACGACTAAAGGAGATCACATGGAGAAAGTGCCCAGCACAGCCACGCACACAGCAGATGCTTACGATGCTCATTTGCTTGCAAGACAGGCTCTTACCGTGGTGCAAGGGAAGGAGTCAGGAGGTGGGCAGTCTCCTGCTCAATGCTGAGCAACAGCCTTCCACCGAACCTCTCTCTTTGGCCTCCAAGACCTGACCTGACCGGGCTCTGCCCACCTCTGTCCTCACTTAGCCCCCTCCTGTCTCAGCAGCCTCCCTGCTGTCCCTTAAATTCACCCAGCTCAATCCCATCTCAGGGCCTTTGCACTTGCTGGTCCCACAGCCTGGAGCCCTGTTCCCCGGAGCTTCACAAGGCTGCCCCCTCCATTCAGGTCTCATCTAAATGCCATCCCCCAATTAGGTTCCCGCAACCATCCAGCTAAATAGAGACACATGCCTAGTCACTATGCCATCACACTGTGCATTTCATTCACACCACAGATCACGCTGGATTTATCTGGCTCAGGGAGAGAGCACCTCTGAGGGGTCACTGTTAAATTTCTGATGCCTGGGAGAGTAACTACATAAAATAACAACACAGGAGGTGCTCCTTACACAATAACAACACAGGAGGCGCTCCTCATACAATAACAACACAGGAGGCGCTCCTTATACAATAACAAAGGAGGTGCTCCTTATACAATAACACAGGAGATGCTCCTATACAATAACAGCACAGGAGGCACTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGGTGCTCCTTATACAATAACAACACAGGAGGTGCTCCTTATACAATAACACAGGAGGTGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACAACACAGGAGATGCTCCTTATACAACAACACAGGAGGCGCTCCTTATACAATAACAACACAGGAGGTGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGGCGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGACATGCTCCTTATACAATAACAAAGGAGGCGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACAACACAGGAGGTGCTCCTTATACAATAACACAGGGGGCGCTCCTTATACAATAACAACACAGGAGCTGCTCCTTATACAATAACACAGGAGATGCTCCTTATACAATAACACAGGAGGCGCTCCTTATACAATAACAACACAGGAGGTGCTCCTTATACAATAATAATACAGGACATGCTCCTCACAGAATGATAGGGAGTGCTCCTAATACAATAACAGCACAGAGGGTGCTCCTTATACAATGGCAGCACAGGGAGCAGAGTAGAGAAGGGTGATGATGCTCCTGAAAGTCTCTTGTTTGCCCCAGGCCCTCAGTCATAGTCAGGGGCCTGGAGAAAGCTCAGAGGCAAGAGATCCATTTCTAATTCCCTGGGCAAATCTCTCTCCCTCTCTGTATTCGCAGTTTTCTCTGCAAACCGAAGTGATTGCATGTGATGAACCATATTTCCTTCCAGCTCAAACGAAAAGATTCCACAGACTTGGATAACTTCTCATTTTAGCCAATAACCAGCTCACGCCAGAACATGATTCATCTCTGCTGATTCTGCCTAGCAACCAGGCCTTCTCCCCACATCCCAGATCAACTCTCCCCCAAGAAAAATTCCTTGCCCACCACACACCCGCCCAGCCCCCAGTGTCCCGGAGAGGAATGCAAGGCTTCAAGATCCCCTCCTCGCCTGTCTGCCAGCAGCATTTTAACTCAACCTCAGAATGTCTCCGACTCTGTCTGGAACAACTGGGGGAAGCTGTGCCCCTCCTGGGATTAGCACAGGAAACAGCAGCAGAAGTGAGGCTGGTGAAAGCGCTGACCCAGCATGCGGAGATCATTTCTATTCTGATGCCTCACCCTCCTCTTCTGCTCCCTTCCTCAGGCCTCTTACAGTGTCTGCATTTGAGGGAGGGAGGAAGAGATGGGGCAAGTGAAAGAAAGGAAGGGAGGTTCCATGCTTGAGACAAAACCAGCTTGTTCAGACTGCCTGAGGGTGTTTTTACCCAGTTTCCCACAGTGAGGAAAAAAACTGTATCATCATTTTAGTAGATTTGGGTAAACATTTGATCAGCTTCAATACCCATTTGTGACAAAATTTTGGCAATCTAGGAAGAGAAAAGAATGTCCTTAACTTGATACAGGACATTGACAAGAAAACTACAGCAAACACCTTGCCCACTGGCAAATCTTTGGAAGCATTCCCATTAAGATCAGGAACAAGGAAGGGTGCTCACAACTACCACCACCATGACCACTATCACCACCTCCACTACCATCACCATCACCATGACTACCTACACCACCACCACCATCACCATTTCCACCAACATGATCACCACCACCACCATCACCATCACCACAACCACCATCTCCACCACCACCATCACCACCACCACCATCACCACCTCCACCACCACCATCACCATCACCACCACCACCATCACCATCTCCACCACCACCATCACCATCACCACCACCACCATCACCATCACCACCACCATCAACATCTCCACCACCACCATGATCACCACCACCACCACCATCAACATCTCCACCACCACCATGATCACCACCACCACTACCACCACCACCATCACCATCACCGTCTCCACCACCACCACCGTCGCCACCACCACCATCACCACCACCACCACCACCATCTCCACCACCACCATCTCCACCACCACCATCACCACCACCACCACTACCATCACCACCTCCACCACCACCACCACCATCTCCACCACCACCTCCACCACCACCACCACCATCATCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8215:HG2_PB_HySA_24572:HG3_PB_pbsv_13156:HG2_PB_PB10Xdip_6479:HG2_PB_SVrefine2PB10Xhap12_9727:HG3_PB_SVrefine2PBcRDovetail_6371:HG3_PB_SVrefine2Falcon1Dovetail_8148:HG2_PB_SVrefine2Falcon1plusDovetail_2641:HG2_PB_SVrefine2PBcRplusDovetail_2513:HG2_PB_SVrefine2Falcon2Bionano_6682;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_2513;NumExactMatchSVs=1;ClusterMaxShiftDist=0.086036;ClusterMaxSizeDiff=0.0824324;ClusterMaxEditDist=0.180856;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=4516;DistBack=12995;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=104;REFWIDENED=12:108972359-108972462;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9985;PctRecOverlap=0.9839;SizeDiff=-7;StartDistance=-70;EndDistance=-70;GTMatch=1;TruScore=99;MatchId=1273.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:1:15:0:30:./.:19:35:24:53:./.:0:8:1/1:0:523:.:4610:.
chr12	109493205	HG2_Ill_GATKHCSBGrefine_9026	A	ATATATACATATATATATATATATACATATATATATATATATATATTTTTTTTTTTT	20	PASS	ClusterIDs=HG2_PB_pbsv_13462:HG4_Ill_GATKHC_21638:HG4_PB_HySA_19697:HG2_Ill_GATKHCSBGrefine_9026;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9026:HG4_Ill_GATKHC_21638;NumExactMatchSVs=2;ClusterMaxShiftDist=0.131148;ClusterMaxSizeDiff=0.131148;ClusterMaxEditDist=0.224;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=11;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=12:109493204-109493207;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.9655;PctRecOverlap=0.9661;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1274.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:32:./.:19:20:4:1:1|0:1:9:11:0:0/1:8:6:./.:.:.:.:.:.
chr12	109647684	HG2_Ill_SVrefine2DISCOVARplusDovetail_2982	G	GTGTGTATATATGTATATATACACACACACACACGTGTGTGTATATATGTATATACACACACATATATGTGTATATATGTGTATACACACATATATGTGTATACACACACATATATGTGTATATATACACACATACATGCATGTGTGTATATATGTGTATATATACACACATACATGCATGTGTGTATATATGTGTATATATACACACATACGTATGTGTGTATATATACACACGTACGTATGTGTGTATATATGTGTATATATACACACATACATATGTGTGTATATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8217:HG2_PB_pbsv_13466:HG4_Ill_SVrefine2DISCOVARDovetail_9642:HG2_Ill_SVrefine2DISCOVARplusDovetail_2982;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2982:HG4_Ill_SVrefine2DISCOVARDovetail_9642;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0703518;ClusterMaxSizeDiff=0.0703518;ClusterMaxEditDist=0.164154;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=288;DistBack=15268;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=299;REFWIDENED=12:109647663-109647961;PctSeqSimilarity=0.8882;PctSizeSimilarity=0.7701;PctRecOverlap=0.6373;SizeDiff=-86;StartDistance=-93;EndDistance=-93;GTMatch=0;TruScore=76;MatchId=1275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:24:0|1:31:5:1:19:1|0:0:11:26:0:0/1:34:9:./.:.:.:.:.:.
chr12	109887636	HG2_Ill_GATKHCSBGrefine_9036	T	TAAACAGTATAAAATGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCACCACTGCACTCCAGCCGGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_19703:HG4_PB_pbsv_13473:HG2_Ill_breakscan11_4422:HG2_PB_pbsv_13468:HG4_Ill_GATKHCSBGrefine_9319:HG2_Ill_MetaSV_1111:HG2_Ill_GATKHCSBGrefine_9036:HG2_PB_SVrefine2Falcon1plusDovetail_2645;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9036:HG2_Ill_MetaSV_1111:HG4_Ill_GATKHCSBGrefine_9319;NumExactMatchSVs=3;ClusterMaxShiftDist=0.083682;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.220408;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=119;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=12:109887637-109887650;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9917;PctRecOverlap=0.9835;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1276.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:42:0|1:32:0:2:39:1|0:0:21:16:0:0/1:31:8:./.:.:.:.:.:.
chr12	110305689	HG2_PB_SVrefine2PB10Xhap12_9736	T	TCTCCTGCCTCAGCTTCCTGAGTAGCTGGGACTACAGGTGCCCGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCGCGATCTCCTGACCTCGTGATCCACCCGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCTCACTGCAGCTTTGACCTCCGAGGCTCAAGTGATC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2648:HG2_PB_PB10Xdip_6537:HG4_PB_assemblyticsfalcon_6043:HG2_PB_pbsv_13475:HG3_PB_SVrefine2Falcon1Dovetail_8154:HG4_PB_SVrefine2Falcon1Dovetail_8221:HG4_PB_pbsv_13478:HG4_PB_HySA_19704:HG2_PB_HySA_24581:HG4_PB_SVrefine2PBcRDovetail_6732:HG2_PB_SVrefine2PB10Xhap12_9736:HG2_PB_SVrefine2Falcon2Bionano_6688;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2648:HG4_PB_SVrefine2PBcRDovetail_6732:HG2_PB_SVrefine2PB10Xhap12_9736:HG2_PB_SVrefine2Falcon2Bionano_6688;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0847458;ClusterMaxSizeDiff=0.0847458;ClusterMaxEditDist=0.306034;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=227;DistBack=17602;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=263;REFWIDENED=12:110305690-110305952;PctSeqSimilarity=0.9526;PctSizeSimilarity=0.9784;PctRecOverlap=0.5279;SizeDiff=-5;StartDistance=-107;EndDistance=-107;GTMatch=0;TruScore=81;MatchId=1277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:39:2:2:28:./.:1:5:3:0:./.:4:1:./.:.:.:.:.:.
chr12	110616588	HG4_Ill_SVrefine2DISCOVARDovetail_9646	T	TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTTGTGATCTGCCTGCCTGGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGTGCCCGGGCTAAAAAGGCTGAGATTCTTAAAGAATTATCTCACATTAGGTAATATGGAAGCTTCCCTTTGTTTTGGAGTGATATGTTTAAATATGGTAGGCCAAGTTCTTACTATAGAAATTTTCTTTGTAATGTATTTAATAAAAAGATTATTAAAGCAGAGAAAATAATTTTACTTTTTGAGACAAGGTCTTGCTTTGTCACCCAGGCTGGAGTACAGTGGCATGATCATAGCTTACTGCAGCCTTGACCGCCTGTGTTTGAGCGCTCCTCCCACCTCAGCCTCTCAAGTAGCTGGGACCACAGGCACGTGCCACCACACCCTACTAATTTTTTAATTTTTTTTGTAGGGATGGAGTCTCGCCATGTTGCCCAGGCTGGTCTTGAATTCCTGGACTCAAGCAATCCCCTGCCTCGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCAACTTGCCCAGCCAAAATTATTTTATATAGTACAAAAATCTGGAAATTATTAGTACTCTTAATACATAAGAGGAAGTGATTTTTTAAGTATTATGTTCTGTTTCAGAAATATCAGAAATTTCTGGCATTTTCTTCTGGCATTTGCTTCTTACATTGAGCAATACTTTACAGTCATACATTGCTTAATGACAAGGATACATTTTGAGAAATGCACTTTTTTAGGCAGTTTTGTTGTTGTGTGAACATCATAGACCTTACACAAACCTTGATGATATAGCCTACTACATAACTAGGCTGTATGCCATAGCCTATTGCTCCTAGGCTACAAACTTGTACAGCATGTTACTATACTAAATACTGTAGGCAACTGTAACAGAGTGGTAGGTATTTGTGTATCTAAACATATCTAAACTTAGAAAAGGTACAGTAAAAGTATGGTATTGTAGGCCAGGTACGGTGGGTGGCTCACGCCTGTAATGCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACTTGAGGCCAGGAGTTCAAGACCAGCCTGGCCAACATAGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCAGGTGCCCGTAATCCCAGCTACTCAGGAAGCTGAGGTAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATGATGTCATTGCACTCCAGCCTGGGCAACAGAATGAGACTCCATCTCAAAAAAAATATATATGACATTGTAATCTTATGAGACTGCCATCCTATATGCAGTCCATCATTGACTGCAGTGTTGTTATACAGCACATGACTATACTTTCATCGAGTCAGTGCTTCAGGACCTTTACACATGCTGTTCTCTCCTCCTAGGATGTTGCTCCTTGCCTCTTCTTCCTTCCTCTAACACATTCCTACTTCTTCAGTCTTGGCTTAAATATACCTTCTTCCAAGAAGCTTGCCATATCCCACCTCCCCTACTTCCCAACCCTCGCCTTCCTATCTTCATCCCTACCCAGGTTAAACTGTTACTTATTTGCAGGGTCTATTCAGTTCTGTGTAATGTTTGCCATCATCTTAAACTTCAGTTCAATATTTGTTTTCCCCACTGTTCCTTAAGCTTGATGAGGGCAGGACCTGCAAGTATCTTGCTCTAAGCAACTCTACGTTGTATCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATCAGCCTGGCATGGTCGCGCTCACCTGTAATCCCAGCTACTCAGGAAGATGAGGCAGGAGAACCACACCTGGCTGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9443:HG2_PB_pbsv_13476:HG3_PB_pbsv_13164:HG4_PB_pbsv_13479:HG4_PB_HySA_19705:HG3_PB_HySA_20362:HG2_PB_HySA_24582:HG2_PB_PB10Xdip_6538:HG2_PB_SVrefine2Falcon2Bionano_6689:HG4_PB_SVrefine2PBcRDovetail_6733:HG4_Ill_SVrefine2DISCOVARDovetail_9646:HG3_PB_SVrefine2PBcRDovetail_6376:HG3_Ill_SVrefine2DISCOVARDovetail_9776:HG2_PB_SVrefine2PBcRplusDovetail_2520:HG2_PB_SVrefine2PB10Xhap12_9737:HG3_PB_SVrefine2Falcon1Dovetail_8155:HG2_PB_SVrefine2Falcon1plusDovetail_2649:HG4_PB_SVrefine2Falcon1Dovetail_8222:HG2_Ill_SVrefine2DISCOVARplusDovetail_2985;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9737:HG2_PB_SVrefine2PBcRplusDovetail_2520:HG3_Ill_SVrefine2DISCOVARDovetail_9776:HG3_PB_SVrefine2PBcRDovetail_6376:HG4_Ill_SVrefine2DISCOVARDovetail_9646:HG4_PB_SVrefine2PBcRDovetail_6733;NumExactMatchSVs=6;ClusterMaxShiftDist=0.065735;ClusterMaxSizeDiff=0.0652174;ClusterMaxEditDist=0.158917;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1875;DistBack=5475;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=122;REFWIDENED=12:110616589-110616710;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1278.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:82:1/1:0:46:0:36:1/1:0:12:0:13:1/1:0:38:./.:17:308:.:1750:.
chr12	111196734	HG3_Ill_Krunchall_18108	A	ACAAAGTCCTGATCTTTTAGTGATAGCTATTCAAATATTTATAGATGAAATGACATGACGTCTGGGATCAGCTT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17063:HG3_PB_pbsv_13166:HG2_PB_pbsv_13479:HG3_Ill_svaba_17014:HG3_Ill_manta_3069:HG3_Ill_Spiral_14121:HG3_Ill_Krunchall_18108:HG3_Ill_GATKHC_21554:HG3_Ill_GATKHCSBGrefine_8923:HG3_Ill_Cortex_868:HG3_Ill_250bpfermikitraw_17599:HG3_Ill_150bpfermikitraw_17105:HG2_Ill_svaba_16884:HG2_Ill_manta_3745:HG2_Ill_SpiralSDKrefine_3868:HG2_Ill_Krunchall_18454:HG2_Ill_GATKHCSBGrefine_9038:HG2_Ill_Cortex_1975:HG2_Ill_250bpfermikitraw_18115;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17063:HG3_Ill_svaba_17014:HG3_Ill_manta_3069:HG3_Ill_Spiral_14121:HG3_Ill_Krunchall_18108:HG3_Ill_GATKHC_21554:HG3_Ill_GATKHCSBGrefine_8923:HG3_Ill_Cortex_868:HG3_Ill_250bpfermikitraw_17599:HG3_Ill_150bpfermikitraw_17105:HG2_Ill_svaba_16884:HG2_Ill_manta_3745:HG2_Ill_SpiralSDKrefine_3868:HG2_Ill_Krunchall_18454:HG2_Ill_GATKHCSBGrefine_9038:HG2_Ill_Cortex_1975:HG2_Ill_250bpfermikitraw_18115;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0794702;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.18543;PBcalls=2;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=8769;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=12:111196735-111196738;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1279.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:0|1:26:1:1:21:0|1:25:0:1:23:0/1:14:25:./.:.:.:.:.:.
chr12	111318458	HG2_Ill_SVrefine2DISCOVARplusDovetail_2989	T	TTGATAAGTGGTGATGATGGTGGTGACGATAATGATGGTAATGATGGTGATATGGTGATGGTGATGATGGTGAATAATGGTGATGGTAATGATAATGACTGTGGTGACGGTGGTGGCGATGATGGTGATGGTGATGATGGGGATGATAGTGGTGATTAGGAAGATAATGATGGTGATGGTAATCATGGTGATGAGGGTGATAATGGTGATGGTAATGATGATGATGATGGTGATAATGATGGTGATGATGGTGGTGGTGGTGGTGATAATGATGATGGTTATGGTGATGGCGGTGATGATGAGGATGGTGATGGTGGTGGTGATGATGGTGATGATGATGGTGATAGTGGTGATTAGGAAGGTGATGATGGTGATGGTGAGGTAGTGATGGTGGTGGTGGTGATGAATGTGATGGTGGTCATGGTAATGATGGTGATAATGGTGATGATGATGGTGGTGGTGGTGATGGTGGTGATGATAATGGTGATAATGGTGATGGCGGTGGTGAGGATGATGATGGTGACAGTGATGATATTGGTGATGGTAGTGATAATGGTTATGATGATGGTGGTGGTGGTGGTGGTGGGGGTCATGGTAATGATGGTGATGATGGTGGTGATGGTGATGATGATGGTGATGGTGGTGATGAGGATGGTGATGGTTGTGATGTAGTGATGGTGGGGTGGTGATAGTGATGGTGATGATAGTGGTGATGGTGATAGTGGTAATGGTGGTGGTGATGGTGGTGGTGATGATGATGGTGATGGTGGTGGCAGTGATGATGGTGATGATGGTAATAGTGATGATAGTGGTGATAATGGTGATGGTGGTGAGGATGTTATGGTGACAGTGATGATGGTAATGGTAGTGATGGTGATAATGGTGATGATGATAGTGGTAATGGTAATGGTGGTGGTGGTGATGATGGTGATGGTGGTCATGGTAATGATGGTGATAATGATGGTGGTGGTGATGGTAATGGTGGTGATGATAATGATTGTGGTGATGGTGGTGGTGATGATAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8156:HG4_PB_pbsv_13482:HG4_PB_HySA_19707:HG2_PB_pbsv_13480:HG3_PB_pbsv_13168:HG2_Ill_breakscan11_4423:HG2_Ill_MetaSV_1112:HG4_Ill_GATKHCSBGrefine_9321:HG4_Ill_MetaSV_1185:HG2_Ill_GATKHCSBGrefine_9039:HG3_Ill_MetaSV_1228:HG2_PB_PB10Xdip_6539:HG4_PB_SVrefine2Falcon1Dovetail_8223:HG2_PB_SVrefine2Falcon1plusDovetail_2650:HG2_PB_SVrefine2PBcRplusDovetail_2521:HG4_PB_SVrefine2PBcRDovetail_6734:HG2_PB_SVrefine2Falcon2Bionano_6690:HG4_Ill_SVrefine2DISCOVARDovetail_9649:HG3_Ill_SVrefine2DISCOVARDovetail_9782:HG2_Ill_SVrefine2DISCOVARplusDovetail_2989:HG2_PB_SVrefine2PB10Xhap12_9739:HG3_PB_SVrefine2PBcRDovetail_6378;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2989:HG3_Ill_SVrefine2DISCOVARDovetail_9782:HG4_Ill_SVrefine2DISCOVARDovetail_9649;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0580552;ClusterMaxSizeDiff=0.0570876;ClusterMaxEditDist=0.22868;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=1023;DistBack=13694;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=231;REFWIDENED=12:111318459-111318689;PctSeqSimilarity=0.993;PctSizeSimilarity=0.9912;PctRecOverlap=0.9433;SizeDiff=9;StartDistance=-54;EndDistance=-54;GTMatch=1;TruScore=97;MatchId=1280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:25:1:22:1/1:2:68:0:75:1/1:0:22:./.:13:175:.:1047:.
chr12	111763410	HG2_PB_SVrefine2PB10Xhap12_9742	T	TTTTTGTTTATAGTGTTGTGGTGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGGTGGGGGAGGGGTGGGTTTGTTTATAGTGTTGTGTTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTGGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGTTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGTTGGGGGAGGGGTGGGTTTTGTTTATAGTGTGTTGGGGGAGGGGTGGGTTTTGTTTATAGTGTGTTGGGGGAGGGGTGGGTTTTGTTTATAGTGTGTTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGTTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGTTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGTTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGTTGGGGGAGGGTGGGTTTTGTTTATAGTGTTGGGGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGATGGGGAGGGGTTGGTTTTGTTTATAGTGTTGGGGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGGGGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGGGGGAGGGGTGGGTTTTGTTTATAGTGTTGGGGTCGGGGAGGGGTGGGTTTTGTTTATAGTGTTGTGTTGGGGGAGGGGTGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2653:HG2_PB_SVrefine2PBcRplusDovetail_2524:HG4_PB_pbsv_13486:HG2_PB_pbsv_13484:HG3_PB_pbsv_13172:HG2_PB_SVrefine2PB10Xhap12_9742:HG2_PB_SVrefine2Falcon2Bionano_6693:HG4_PB_SVrefine2Falcon1Dovetail_8225:HG3_PB_SVrefine2Falcon1Dovetail_8159;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9742:HG2_PB_SVrefine2PBcRplusDovetail_2524;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0918605;ClusterMaxSizeDiff=0.0906977;ClusterMaxEditDist=0.227405;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=853;DistBack=28533;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=898;REFWIDENED=12:111763411-111764308;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9873;PctRecOverlap=0.6185;SizeDiff=-11;StartDistance=-324;EndDistance=-324;GTMatch=0;TruScore=86;MatchId=1282.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:./.:0:8:0:2:./.:0:1:0:4:./.:0:0:0/1:7:16:.:.:.
chr12	113271365	HG4_Ill_GATKHCSBGrefine_9325	C	CTCCCTTTGAGGGTGCTGGCTGCATGCGTGGGTCTCCAATTCAGCTTCTGCACCCTGTCAGGAGCTCCACGTCAG	20	PASS	ClusterIDs=HG4_PB_HySA_19712:HG4_PB_pbsv_13490:HG3_PB_pbsv_13178:HG2_PB_pbsv_13488:HG3_PB_HySA_20376:HG2_PB_HySA_24604:HG2_Ill_breakscan11_4424:HG4_PB_assemblyticsfalcon_6056:HG4_Ill_svaba_16928:HG4_Ill_manta_3179:HG4_Ill_Krunchall_18784:HG4_Ill_GATKHC_21660:HG4_Ill_GATKHCSBGrefine_9325:HG4_Ill_Cortex_823:HG4_Ill_250bpfermikitraw_17927:HG4_Ill_150bpfermikitraw_17256:HG3_Ill_svaba_17023:HG3_Ill_manta_3073:HG3_Ill_Spiral_14126:HG3_Ill_Krunchall_18120:HG3_Ill_GATKHC_21563:HG3_Ill_GATKHCSBGrefine_8929:HG3_Ill_Cortex_869:HG3_Ill_250bpfermikitraw_17607:HG3_Ill_150bpfermikitraw_17110:HG2_Ill_svaba_16890:HG2_Ill_manta_3749:HG2_Ill_SpiralSDKrefine_3873:HG2_Ill_Krunchall_18464:HG2_Ill_GATKHC_21675:HG2_Ill_GATKHCSBGrefine_9043:HG2_Ill_Cortex_1977:HG2_Ill_250bpfermikitraw_18123:HG2_Ill_150bpfermikitraw_17070;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17070:HG2_Ill_250bpfermikitraw_18123:HG2_Ill_Cortex_1977:HG2_Ill_GATKHCSBGrefine_9043:HG2_Ill_GATKHC_21675:HG2_Ill_Krunchall_18464:HG2_Ill_SpiralSDKrefine_3873:HG2_Ill_manta_3749:HG2_Ill_svaba_16890:HG3_Ill_150bpfermikitraw_17110:HG3_Ill_250bpfermikitraw_17607:HG3_Ill_Cortex_869:HG3_Ill_GATKHCSBGrefine_8929:HG3_Ill_GATKHC_21563:HG3_Ill_Krunchall_18120:HG3_Ill_Spiral_14126:HG3_Ill_manta_3073:HG3_Ill_svaba_17023:HG4_Ill_150bpfermikitraw_17256:HG4_Ill_250bpfermikitraw_17927:HG4_Ill_Cortex_823:HG4_Ill_GATKHCSBGrefine_9325:HG4_Ill_GATKHC_21660:HG4_Ill_Krunchall_18784:HG4_Ill_manta_3179:HG4_Ill_svaba_16928:HG4_PB_assemblyticsfalcon_6056;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0921053;ClusterMaxSizeDiff=0.0903226;ClusterMaxEditDist=0.226415;PBcalls=7;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=41692;DistForward=7612;DistMin=7612;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=12:113271364-113271366;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1283.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:37:./.:17:12:15:25:1|0:1:29:22:0:0/1:35:17:./.:.:.:.:.:.
chr12	113954041	HG4_Ill_GATKHC_21674	C	CTCCCTTCCTCCCTCCCTCCCTCCCTCCATCCCTCCATCCCTCCCTCCCTCCATCCCTCCA	20	PASS	ClusterIDs=HG2_PB_pbsv_13494:HG4_Ill_GATKHC_21674:HG4_PB_pbsv_13496;NumClusterSVs=3;ExactMatchIDs=HG4_Ill_GATKHC_21674;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0854701;ClusterMaxSizeDiff=0.0854701;ClusterMaxEditDist=0.226087;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=22;DistForward=27139;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=119;REFWIDENED=12:113953972-113954090;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:./.:19:32:20:5:./.:1:13:10:3:0/1:7:4:./.:.:.:.:.:.
chr12	114869574	HG4_PB_SVrefine2PBcRDovetail_6742	C	CTGTGTGTGTGTATGTGTATACGTCTGTGTGTGTGTGTGTGTGTGATACGTCTGTGTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9460:HG4_Ill_GATKHC_21694:HG2_PB_HySA_24635:HG4_PB_HySA_19738:HG2_Ill_GATKHC_21700:HG4_PB_SVrefine2PBcRDovetail_6742:HG2_PB_pbsv_13503:HG4_Ill_SVrefine2DISCOVARDovetail_9669:HG2_PB_SVrefine2Falcon2Bionano_6706;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9460:HG4_PB_SVrefine2PBcRDovetail_6742:HG4_Ill_SVrefine2DISCOVARDovetail_9669:HG2_PB_SVrefine2Falcon2Bionano_6706;NumExactMatchSVs=4;ClusterMaxShiftDist=0.300885;ClusterMaxSizeDiff=0.300885;ClusterMaxEditDist=0.333333;PBcalls=5;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=57;DistBack=61476;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=80;REFWIDENED=12:114869575-114869654;PctSeqSimilarity=0.9655;PctSizeSimilarity=0.8906;PctRecOverlap=0.3231;SizeDiff=-7;StartDistance=-40;EndDistance=-40;GTMatch=0;TruScore=72;MatchId=1286.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:29:0|1:51:6:3:24:./.:3:31:16:0:0/1:16:6:./.:.:.:.:.:.
chr12	115072979	HG2_Ill_GATKHC_21704	T	TATATATATATAATATATATATATTATATATATATAATATATATATATTATATATATATAATATATATATATTATATATATATAATATATATATATAATATATATATAATATATATATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6745:HG2_PB_pbsv_13506:HG4_Ill_GATKHC_21698:HG4_Ill_GATKHCSBGrefine_9343:HG2_Ill_GATKHC_21704:HG3_PB_pbsv_13190:HG4_PB_SVrefine2Falcon1Dovetail_8236:HG3_PB_SVrefine2Falcon1Dovetail_8169:HG4_PB_pbsv_13509:HG3_Ill_svaba_17044:HG3_Ill_scalpel_13032:HG3_Ill_GATKHC_21588;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHC_21704:HG4_Ill_GATKHCSBGrefine_9343:HG4_Ill_GATKHC_21698;NumExactMatchSVs=3;ClusterMaxShiftDist=0.324324;ClusterMaxSizeDiff=0.324324;ClusterMaxEditDist=0.324324;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=118;DistBack=0;DistForward=102;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=202;REFWIDENED=12:115072956-115073157;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1287.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:24:1|0:1:20:23:2:./.:0:0:0:0:0/1:5:14:./.:.:.:.:.:.
chr12	115251918	HG2_Ill_GATKHCSBGrefine_9057	T	TTTTCTTTCTTTCTTTTTCTTTCTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17099:HG3_Ill_Spiral_14141:HG3_PB_pbsv_13192:HG3_Ill_GATKHC_21596:HG3_Ill_GATKHCSBGrefine_8942:HG3_Ill_FB_11722:HG2_Ill_GATKHC_21711:HG2_Ill_GATKHCSBGrefine_9057:HG2_Ill_FB_11706;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17099:HG3_Ill_GATKHC_21596:HG3_Ill_GATKHCSBGrefine_8942:HG3_Ill_FB_11722:HG2_Ill_GATKHC_21711:HG2_Ill_GATKHCSBGrefine_9057:HG2_Ill_FB_11706;NumExactMatchSVs=7;ClusterMaxShiftDist=0.103448;ClusterMaxSizeDiff=0.103448;ClusterMaxEditDist=0.15;PBcalls=1;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=17;DistForward=14330;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=15;REFWIDENED=12:115251917-115251934;PctSeqSimilarity=0.9683;PctSizeSimilarity=0.9375;PctRecOverlap=0.9385;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=1288.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:22:0|1:28:1:1:21:./.:10:0:3:7:0/1:24:12:./.:.:.:.:.:.
chr12	115266249	HG2_Ill_MetaSV_1116	A	AAATTTCGTATAAGTCACAGTTTCTCCAACAGTGGGACAGACAGAACCCAGACAGAACTCAGAACTCAGACAGAGCTCTGAAACTCAACAGGATCCTGGTTTTGAGATGTTCTGGATTTGTCTTGAATGTTCTTTTCATTTGAACAAGCTAAGGGTCCATGAGTGGTTGGACTGACCTCTCTTTAGTTGTGTCTTTTGTCTGCATTTTGGACAAGAATGGGGTTGCTCTTGGGGAGTTTCAGTCTTGCTCCAAGAACTATTGCCAACTTCCATGATGACACAGGGCCAAGAAGGAAGGTGAGTGCTTCCTCAAATATCTTCTTTCCAGAATCTCCTCATCTCTATCTTTGCATCTCAAATATGAGTCTCCTTATCAACCTAGATCTTCCTAGGAAATGGTTCTTCCTCTCACCAGCCCTCCATCATAGTGAGAGATCATGTTCCAATATGAAGTTTTCTTCAAAAGGGTTCTGCTCCATCCATTTTATTTCCAGATTCCACCAACATCTGGTAACAGCTTCCCTTTTACAAACCATGACGGCTGGGGCTGTTATATGAAAAATGATTCCATGGTAGATCAGTTTGAAATTAGAGAAAATCCAACTTTTTTTTTTTTCCTGTAGACTCTCCAGAGCTTGCTTTTTTTTTTTTTTTTTCAGACGGAGTCTCCCTCTGTCACCTAGGCTGGAGTGCAGTGGCACAATCTCAGTTCACTGCAACCTCTGCCTCCACCTCCCTGGTTCAAACGATTCTTTTGTCTCAGCCTCCCGAGTAGCTGGGACTGTAGGAGCCTGCCACCATGCCTGACTAATGTTTACTTTTAGTGGAGACAGGGTTTTGCCCTGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCTGTCTGCCTCGGCCTCCAAAAGTGCTGGGATTATAGGTGTGAGCCACTGTGCCCGGCCTTTTTCAGAGCCTTTAATGTGCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8237:HG3_PB_pbsv_13193:HG2_PB_PB10Xdip_6571:HG2_PB_pbsv_13509:HG3_PB_assemblyticsfalcon_6155:HG4_PB_assemblyticsfalcon_6078:HG2_Ill_breakscan11_4427:HG2_10X_SVrefine210Xhap12_9462:HG2_PB_SVrefine2Falcon2Bionano_6709:HG3_Ill_MetaSV_1232:HG3_Ill_GATKHCSBGrefine_8943:HG2_Ill_SVrefine2DISCOVARplusDovetail_3007:HG2_Ill_MetaSV_1116:HG2_Ill_GATKHCSBGrefine_9058:HG3_PB_SVrefine2PBcRDovetail_6392:HG2_PB_SVrefine2PB10Xhap12_9759:HG2_PB_HySA_24645:HG3_PB_SVrefine2Falcon1Dovetail_8170;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9058:HG2_Ill_MetaSV_1116:HG2_Ill_SVrefine2DISCOVARplusDovetail_3007:HG3_Ill_GATKHCSBGrefine_8943:HG3_Ill_MetaSV_1232;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0788382;ClusterMaxSizeDiff=0.0767635;ClusterMaxEditDist=0.226815;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=964;DistBack=-1;DistForward=45937;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=12:115266250-115266252;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1289.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:29:0|1:16:5:4:18:0|1:25:0:0:13:0/1:28:10:0/1:32:66:.:.:.
chr12	115312188	HG2_PB_SVrefine2Falcon2Bionano_6710	C	CAGGAAAGGAGAGGACAGGGTAGGGGAGGAGAGGGGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6746:HG2_PB_SVrefine2PB10Xhap12_9760:HG3_PB_pbsv_13194:HG2_PB_SVrefine2PBcRplusDovetail_2536:HG2_PB_SVrefine2Falcon2Bionano_6710:HG2_PB_SVrefine2Falcon1plusDovetail_2664:HG4_PB_assemblyticsfalcon_6079:HG4_PB_SVrefine2Falcon1Dovetail_8238;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6710;NumExactMatchSVs=1;ClusterMaxShiftDist=0.361186;ClusterMaxSizeDiff=0.361186;ClusterMaxEditDist=0.371968;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=210;DistBack=-190;DistForward=-1;DistMin=-190;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=265;REFWIDENED=12:115312189-115312453;PctSeqSimilarity=0.9462;PctSizeSimilarity=0.881;PctRecOverlap=0.7773;SizeDiff=25;StartDistance=-34;EndDistance=-34;GTMatch=1;TruScore=86;MatchId=1290.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:36:1/1:3:20:1:10:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr12	116347532	HG2_Ill_150bpfermikitraw_17111	G	GTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGTTT	20	PASS	ClusterIDs=HG3_Ill_manta_3080:HG2_PB_HySA_24661:HG3_PB_HySA_20414:HG3_PB_pbsv_13202:HG2_PB_pbsv_13517:HG3_Ill_250bpfermikitraw_17647:HG3_Ill_150bpfermikitraw_17152:HG2_Ill_250bpfermikitraw_18163:HG2_Ill_150bpfermikitraw_17111;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17111:HG2_Ill_250bpfermikitraw_18163:HG3_Ill_150bpfermikitraw_17152:HG3_Ill_250bpfermikitraw_17647;NumExactMatchSVs=4;ClusterMaxShiftDist=0.285714;ClusterMaxSizeDiff=0.285714;ClusterMaxEditDist=0.349515;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=12310;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=12:116347533-116347572;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1291.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:47:./.:16:15:11:20:./.:4:6:0:21:0/1:14:15:./.:.:.:.:.:.
chr12	116561953	HG2_Ill_150bpfermikitraw_17113	G	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGACAGAGAGAGACAGAGAGAGACAGAGAGAGAC	20	PASS	ClusterIDs=HG2_PB_HySA_24662:HG3_PB_HySA_20417:HG2_Ill_SpiralSDKrefine_3903:HG3_Ill_150bpfermikitraw_17154:HG2_Ill_150bpfermikitraw_17113:HG2_PB_pbsv_13519;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17113:HG3_Ill_150bpfermikitraw_17154;NumExactMatchSVs=2;ClusterMaxShiftDist=0.119403;ClusterMaxSizeDiff=0.119403;ClusterMaxEditDist=0.253731;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=-5;DistForward=3;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=86;REFWIDENED=12:116561911-116561996;PctSeqSimilarity=0.9853;PctSizeSimilarity=0.9706;PctRecOverlap=0.971;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:26:0|1:32:0:2:21:./.:17:3:3:6:0/1:22:15:./.:.:.:.:.:.
chr12	116715144	HG3_Ill_Cortex_874	GCGCGCGC	TCCGCGGCGGCCGCGCGGCTCCTTCCTGCTCGGGCGGCGGCGGCGGCTGCGGCGGCTTCGGCGGCGGCGGGGGGCGCTGTCCGTGCGGCCCGGCGCCCTCCCCGCCTCTCAGGGCCGCCGCTGCCT	20	PASS	ClusterIDs=HG4_PB_pbsv_13518:HG4_PB_HySA_19752:HG2_PB_PB10Xdip_6581:HG2_Ill_SpiralSDKrefine_3905:HG3_PB_HySA_20419:HG2_PB_HySA_24664:HG4_PB_assemblyticsfalcon_6090:HG4_PB_SVrefine2PBcRDovetail_6751:HG4_PB_SVrefine2Falcon1Dovetail_8243:HG4_Ill_SVrefine2DISCOVARDovetail_9678:HG4_Ill_Cortex_829:HG3_PB_SVrefine2PBcRDovetail_6398:HG3_Ill_SVrefine2DISCOVARDovetail_9814:HG3_Ill_Cortex_874:HG2_PB_SVrefine2Falcon2Bionano_6716:HG2_PB_SVrefine2Falcon1plusDovetail_2669:HG2_Ill_SVrefine2DISCOVARplusDovetail_3012:HG2_Ill_Cortex_1990:HG3_PB_assemblyticsfalcon_6167:HG3_PB_SVrefine2Falcon1Dovetail_8176:HG2_Ill_manta_3755:HG3_PB_pbsv_13205:HG2_PB_assemblyticsPBcR_5998:HG2_PB_SVrefine2PBcRplusDovetail_2541:HG2_PB_SVrefine2PB10Xhap12_9767:HG4_Ill_MetaSV_1193:HG2_Ill_MetaSV_1119:HG3_Ill_MetaSV_1235;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_Cortex_1990:HG2_Ill_SVrefine2DISCOVARplusDovetail_3012:HG2_PB_SVrefine2Falcon1plusDovetail_2669:HG2_PB_SVrefine2Falcon2Bionano_6716:HG3_Ill_Cortex_874:HG3_Ill_SVrefine2DISCOVARDovetail_9814:HG3_PB_SVrefine2PBcRDovetail_6398:HG4_Ill_Cortex_829:HG4_Ill_SVrefine2DISCOVARDovetail_9678:HG4_PB_SVrefine2Falcon1Dovetail_8243:HG4_PB_SVrefine2PBcRDovetail_6751:HG4_PB_assemblyticsfalcon_6090;NumExactMatchSVs=12;ClusterMaxShiftDist=0.152542;ClusterMaxSizeDiff=0.152542;ClusterMaxEditDist=0.265487;PBcalls=17;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=118;DistBack=-8;DistForward=9973;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=12:116724848-116715143;PctSeqSimilarity=0.9714;PctSizeSimilarity=1;PctRecOverlap=0.9444;SizeDiff=0;StartDistance=-7;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1293.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:31:1/1:3:17:2:14:./.:0:1:0:2:1/1:0:25:./.:.:.:.:.:.
chr12	117037016	HG2_Ill_breakscan11_4428	T	TAAAAATATTTGTTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4428:HG2_PB_pbsv_13521:HG3_PB_pbsv_13206:HG2_PB_SVrefine2Falcon1plusDovetail_2670;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_breakscan11_4428;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0594901;ClusterMaxSizeDiff=0.0566572;ClusterMaxEditDist=0.149086;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=342;DistBack=27752;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=12:117037017-117037032;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9884;PctRecOverlap=0.9885;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1294.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:24:1|0:3:22:25:0:./.:28:0:1:5:0/1:38:13:0/1:4:32:.:.:.
chr12	117807886	HG2_PB_SVrefine2Falcon2Bionano_6718	TCT	CCATTTATCCCCATCCCTCCGCCCCACCCTCTGTCTGCCAACATTCACCCATCTATCCATCCATCCCCCCGAGTTCATTCACCATCCATCCATCCATCCATCCATCCATCCATTCCCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9475:HG3_PB_assemblyticsfalcon_6178:HG2_PB_HySA_24678:HG3_PB_SVrefine2Falcon1Dovetail_8179:HG4_Ill_SVrefine2DISCOVARDovetail_9685:HG3_PB_pbsv_13210:HG2_PB_SVrefine2PB10Xhap12_9768:HG2_PB_SVrefine2Falcon2Bionano_6718:HG2_PB_pbsv_13525:HG2_PB_HySA_24677:HG4_PB_pbsv_13520;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6718;NumExactMatchSVs=1;ClusterMaxShiftDist=0.273063;ClusterMaxSizeDiff=0.273063;ClusterMaxEditDist=0.317343;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=115;DistBack=-7;DistForward=-1;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=12:117807854-117807886;PctSeqSimilarity=0.8918;PctSizeSimilarity=0.8042;PctRecOverlap=0.8182;SizeDiff=-28;StartDistance=2;EndDistance=4;GTMatch=0;TruScore=83;MatchId=1295.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:0|1:20:2:2:23:./.:38:2:14:12:0/1:26:7:./.:.:.:.:.:.
chr12	118186926	HG2_PB_PB10Xdip_6584	AA	AAAAAAAAAAAAAGCAAGGTAAAATCAATCAACAAGAGAGCTAACTATCCTAAATATTATGCACCAATACAGGAGCACCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCAACATTAATAATGGGAGACTTAACACCCCACTGTCAACATTAGACAGATCCACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACTAATAGACATCTACAGAACTCTCACCCCAAATCAACAGAATATACATTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATTCTCAGACACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCTGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTATATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAGTAACAGAATCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGTCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGCCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAATTGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCACCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACGTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAGCAGCATGGTATTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCTGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGACACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTGGGGGAGAGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACTCATTTGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATATGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_6013:HG4_PB_pbsv_13523:HG2_PB_PB10Xdip_6584:HG2_PB_assemblyticsfalcon_6195:HG2_PB_SVrefine2Falcon1plusDovetail_2671:HG4_PB_SVrefine2PBcRDovetail_6753:HG2_PB_SVrefine2PBcRplusDovetail_2544:HG2_PB_SVrefine2PB10Xhap12_9770:HG2_PB_pbsv_13527:HG4_PB_HySA_19764:HG2_PB_HySA_24689;NumClusterSVs=11;ExactMatchIDs=HG2_PB_PB10Xdip_6584:HG2_PB_SVrefine2PB10Xhap12_9770;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0711864;ClusterMaxSizeDiff=0.0711864;ClusterMaxEditDist=0.163157;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=3750;DistBack=8542;DistForward=22706;DistMin=8542;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=12:118186926-118186938;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9955;PctRecOverlap=0.996;SizeDiff=-17;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:46:./.:13:17:23:5:1|0:0:12:24:0:0/1:14:9:0/1:145:318:.:3797:.
chr12	118461586	HG4_PB_pbsv_13524	G	GCCCCAAATATAATTTTTTTTTTTTCTGTTTTTTTTTGAGACGCGAGTCTCCGCCTTCTGTCGCCCAGGCTGGGTGGCAGAGTGGCGCCGGATCTTCGCGCTCACATGCCAAGCTCCGCCTCCCGGCGTTCACGCCATTCCCTCCTGCCTCAGCCCTCCCCAATAGCTGGACTACAGCGCCCGCAACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGCGGTTTCACCGTTTTTAGCCGGCGCTTCTCGTCTCGATCTCCTACTCACACATAGCTGATCCGCCCGCCTCGCCTCCCAAAGCCTGCTGGCGATACACGCGTGAGCCACCTCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_HySA_19765:HG2_PB_assemblyticsfalcon_6196:HG4_PB_assemblyticsfalcon_6105:HG2_PB_pbsv_13528:HG4_PB_pbsv_13524:HG4_Ill_MetaSV_1194:HG4_Ill_GATKHCSBGrefine_9351:HG2_PB_SVrefine2Falcon1plusDovetail_2672:HG4_PB_SVrefine2PBcRDovetail_6754:HG3_PB_SVrefine2Falcon1Dovetail_8181:HG4_PB_SVrefine2Falcon1Dovetail_8245:HG2_PB_HySA_24690;NumClusterSVs=12;ExactMatchIDs=HG4_PB_pbsv_13524;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0998487;ClusterMaxSizeDiff=0.0998487;ClusterMaxEditDist=0.193833;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=346;DistBack=27787;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=12:118461587-118461600;PctSeqSimilarity=0.9175;PctSizeSimilarity=0.922;PctRecOverlap=0.9193;SizeDiff=27;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=91;MatchId=1297.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:28:./.:16:4:9:20:1|0:0:7:15:0:0/1:23:6:0/1:8:9:.:.:.
chr12	118571032	HG2_PB_SVrefine2PBcRplusDovetail_2545	A	CATTTCATTTCATTTCATTTCATTTCATTTCATTTCATTTCATTTCATTTCATTTCATTTCATTCATTTCATTTCATTTCATTTATTTCATTTCTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2673:HG3_Ill_Spiral_14158:HG2_PB_assemblyticsPBcR_6014:HG3_PB_SVrefine2PBcRDovetail_6404:HG2_PB_SVrefine2PBcRplusDovetail_2545:HG2_PB_HySA_24694:HG2_PB_pbsv_13530:HG3_PB_pbsv_13216;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_2545;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147368;ClusterMaxSizeDiff=0.147368;ClusterMaxEditDist=0.378947;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=96;DistBack=25;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=12:118571033-118571032;PctSeqSimilarity=0.9339;PctSizeSimilarity=0.9897;PctRecOverlap=0.6804;SizeDiff=-1;StartDistance=31;EndDistance=31;GTMatch=0;TruScore=86;MatchId=1298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:48:0|1:23:6:2:44:./.:7:0:1:6:0/1:35:15:./.:.:.:.:.:.
chr12	118732858	HG2_10X_SVrefine210Xhap12_9478	A	AGCATTTTTTTTTTTTCTTTTGGAGACGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGCGCAACCTCTGCCTACCGGGTTCAAGCGATTCTCCTGCTTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTAGTCAGGCTGGTCTCGAACTCCCAATGTCAGGTGATCTGCCCCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACTCTAGGCCAAGCATACTGTTAATGCTATTAAAGGCACAGTGCTGAATGAGATCACCAAGGACACGTGGTCAAAAGAGAAGACCAAGGTCCAATCTCTGAAACACTCCAACTTTAAGAGACTGGGGATAAGAGGAAGAACCAAAGGAGGCCAATAAGAAACTTCCAGTAAGATAAAAGGAAAATGAAGACATTGCGGTATCCTGAAAGTCAAGTGTAAAGTCTCAAGGAAGAGGAGTGGTAACTGCGTCAAATGCTGCTGATAGGTCAAATTGGAGATAAAAATTGACCATTTGATTTAGCAACATGGGGGTCACTGGTGATCTTGATAAAAGTAAATTTGGTGAAATGGCAGGGACACATGCTTTCTTGGCTACGTTAAGGAGCCACTGGCAGAAAAGAAATTGGAGGCAGCAAGTATAGTTTGGTGAGTTTACCTGTAAAGGGGAGCAAAGAAAGGGAGATGTAGCTGGGAGGAAAAGAACAGTTAAGAGAAGATTTTAGCTTGTTTTTAAGATGGGAAAAATAAGAACATGTTTGTAGGCTGATAGGAGTGATCCAGCAGGAAGAAAAATTGGTGTAGGAGAGAAGGCAGAATTGCTGAAGCAATGTCCTTGAGTGGACGTGAGAGGGTGGGAGCCAGTGTACCAATAAAGGATTAGCTTTTGAATGAGGCATAAAAAGTTATCTACTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8182:HG2_PB_assemblyticsfalcon_6199:HG2_PB_SVrefine2Falcon1plusDovetail_2674:HG3_PB_pbsv_13217:HG2_PB_PB10Xdip_6588:HG2_PB_pbsv_13531:HG2_Ill_SVrefine2DISCOVARplusDovetail_3023:HG2_10X_SVrefine210Xhap12_9478:HG2_PB_SVrefine2PB10Xhap12_9772:HG3_PB_SVrefine2PBcRDovetail_6405;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9478:HG2_Ill_SVrefine2DISCOVARplusDovetail_3023;NumExactMatchSVs=2;ClusterMaxShiftDist=0.12112;ClusterMaxSizeDiff=0.119084;ClusterMaxEditDist=0.264463;PBcalls=8;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=969;DistBack=-276;DistForward=87290;DistMin=-276;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=275;REFWIDENED=12:118732859-118733133;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9868;PctRecOverlap=0.9115;SizeDiff=-13;StartDistance=-80;EndDistance=-80;GTMatch=0;TruScore=96;MatchId=1299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:24:0|1:23:0:0:29:./.:20:0:0:4:0/1:25:17:0/1:34:55:.:1002:.
chr12	119768908	HG2_Ill_MetaSV_1120	T	TAAGAGATGACCTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4429:HG2_PB_HySA_24702:HG2_PB_assemblyticsfalcon_6207:HG2_PB_SVrefine2Falcon1plusDovetail_2677:HG2_PB_pbsv_13533:HG2_PB_SVrefine2PB10Xhap12_9774:HG4_PB_pbsv_13527:HG4_PB_assemblyticsfalcon_6113:HG4_PB_HySA_19770:HG4_Ill_MetaSV_1195:HG4_Ill_GATKHCSBGrefine_9352:HG2_PB_SVrefine2Falcon2Bionano_6721:HG2_Ill_MetaSV_1120:HG4_PB_SVrefine2PBcRDovetail_6756:HG4_PB_SVrefine2Falcon1Dovetail_8247:HG3_PB_SVrefine2Falcon1Dovetail_8185;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_1120:HG2_PB_SVrefine2Falcon2Bionano_6721:HG4_Ill_GATKHCSBGrefine_9352;NumExactMatchSVs=3;ClusterMaxShiftDist=0.14557;ClusterMaxSizeDiff=0.14557;ClusterMaxEditDist=0.205696;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=16181;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=12:119768909-119768922;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:23:./.:14:2:4:6:1|0:0:6:16:0:0/1:25:12:0/1:9:35:.:.:.
chr12	120005517	HG4_Ill_GATKHCSBGrefine_9354	T	TATATATAATATATATAAATTATATATTATATATTATATATAAATTATATATA	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17132:HG4_Ill_svaba_16991:HG4_Ill_scalpel_12522:HG4_Ill_manta_3192:HG4_Ill_Krunchall_18853:HG4_Ill_GATKHC_21747:HG4_Ill_GATKHCSBGrefine_9354:HG4_Ill_250bpfermikitraw_17991:HG4_Ill_150bpfermikitraw_17318:HG2_Ill_svaba_16951:HG2_Ill_scalpel_12822:HG2_Ill_SpiralSDKrefine_3919:HG2_Ill_Krunchall_18532:HG2_Ill_GATKHC_21759:HG2_Ill_GATKHCSBGrefine_9067:HG2_Ill_250bpfermikitraw_18188;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17132:HG4_Ill_svaba_16991:HG4_Ill_scalpel_12522:HG4_Ill_manta_3192:HG4_Ill_Krunchall_18853:HG4_Ill_GATKHC_21747:HG4_Ill_GATKHCSBGrefine_9354:HG4_Ill_250bpfermikitraw_17991:HG4_Ill_150bpfermikitraw_17318:HG2_Ill_svaba_16951:HG2_Ill_scalpel_12822:HG2_Ill_SpiralSDKrefine_3919:HG2_Ill_Krunchall_18532:HG2_Ill_GATKHC_21759:HG2_Ill_GATKHCSBGrefine_9067:HG2_Ill_250bpfermikitraw_18188;NumExactMatchSVs=16;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=8;NumTechs=1;NumTechsExact=1;SVLEN=52;DistBack=1860;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=155;REFWIDENED=12:120005461-120005615;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1301.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:29:./.:21:13:8:12:./.:1:7:5:0:0/1:30:27:./.:.:.:.:.:.
chr12	120201092	HG4_Ill_150bpfermikitraw_17320	G	GTGCCAGGGGACTACTGTGTACATTCTCATAATTTTCTAACAATTGAAGTACCAGGGGTCACAGGAGAACACTTTGAGGTCATTTCTGGGTTGTTTTCCCATATGTCTTTCCA	20	PASS	ClusterIDs=HG3_PB_pbsv_13222:HG2_PB_assemblyticsfalcon_6212:HG4_PB_pbsv_13531:HG4_PB_assemblyticsfalcon_6117:HG2_PB_pbsv_13534:HG2_PB_assemblyticsPBcR_6027:HG2_PB_PB10Xdip_6592:HG2_Ill_breakscan11_4430:HG2_PB_HySA_24707:HG4_PB_SVrefine2PBcRDovetail_6757:HG4_PB_SVrefine2Falcon1Dovetail_8249:HG4_Ill_svaba_16992:HG4_Ill_manta_3193:HG4_Ill_SVrefine2DISCOVARDovetail_9697:HG4_Ill_MetaSV_1197:HG4_Ill_GATKHCSBGrefine_9356:HG4_Ill_250bpfermikitraw_17993:HG4_Ill_150bpfermikitraw_17320:HG3_PB_SVrefine2PBcRDovetail_6408:HG3_Ill_svaba_17085:HG3_Ill_manta_3084:HG3_Ill_Spiral_14166:HG3_Ill_SVrefine2DISCOVARDovetail_9834:HG3_Ill_MetaSV_1237:HG3_Ill_GATKHCSBGrefine_8957:HG3_Ill_250bpfermikitraw_17673:HG3_Ill_150bpfermikitraw_17182:HG2_PB_SVrefine2PBcRplusDovetail_2547:HG2_PB_SVrefine2PB10Xhap12_9776:HG2_PB_SVrefine2Falcon2Bionano_6722:HG2_Ill_svaba_16952:HG2_Ill_manta_3757:HG2_Ill_SpiralSDKrefine_3921:HG2_Ill_SVrefine2DISCOVARplusDovetail_3028:HG2_Ill_MetaSV_1121:HG2_Ill_GATKHCSBGrefine_9068:HG2_Ill_250bpfermikitraw_18190:HG2_Ill_150bpfermikitraw_17134:HG2_10X_SVrefine210Xhap12_9484:HG3_PB_SVrefine2Falcon1Dovetail_8186:HG2_PB_SVrefine2Falcon1plusDovetail_2678;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9484:HG2_Ill_150bpfermikitraw_17134:HG2_Ill_250bpfermikitraw_18190:HG2_Ill_GATKHCSBGrefine_9068:HG2_Ill_MetaSV_1121:HG2_Ill_SVrefine2DISCOVARplusDovetail_3028:HG2_Ill_SpiralSDKrefine_3921:HG2_Ill_manta_3757:HG2_Ill_svaba_16952:HG2_PB_SVrefine2Falcon2Bionano_6722:HG2_PB_SVrefine2PB10Xhap12_9776:HG2_PB_SVrefine2PBcRplusDovetail_2547:HG3_Ill_150bpfermikitraw_17182:HG3_Ill_250bpfermikitraw_17673:HG3_Ill_GATKHCSBGrefine_8957:HG3_Ill_MetaSV_1237:HG3_Ill_SVrefine2DISCOVARDovetail_9834:HG3_Ill_Spiral_14166:HG3_Ill_manta_3084:HG3_Ill_svaba_17085:HG3_PB_SVrefine2PBcRDovetail_6408:HG4_Ill_150bpfermikitraw_17320:HG4_Ill_250bpfermikitraw_17993:HG4_Ill_GATKHCSBGrefine_9356:HG4_Ill_MetaSV_1197:HG4_Ill_SVrefine2DISCOVARDovetail_9697:HG4_Ill_manta_3193:HG4_Ill_svaba_16992:HG4_PB_SVrefine2Falcon1Dovetail_8249:HG4_PB_SVrefine2PBcRDovetail_6757;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0779221;ClusterMaxSizeDiff=0.0779221;ClusterMaxEditDist=0.246809;PBcalls=16;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=112;DistBack=17460;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=12:120201093-120201094;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1302.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:1:25:0:11:1/1:0:21:1:30:1/1:0:43:./.:.:.:.:.:.
chr12	120875087	HG2_Ill_GATKHCSBGrefine_9070	T	TTCAGGAGGCTGAGGCAGGGGAATCGCTTGAACCCGGGAGGCGGAGATTGCAGTGAGCTGAGATCGCGCCACTGCACTCCTCCAGCCTGGCAACAGAGCAAGATTCCGTTTCAAAAAAAAAAAAAAAAAAGTTTACTGTCATTTTATGTTATATACTTTTTTTTTAAAGTTTTATTTTTAAAGCTGCTTTTAGACAAGTCGAAGGAAGAAAGAAGGGGATAAGGAGGAAAGAATTTTGTAGACAAAATTTAACAGAGGTCAATTTTTTTTTTTTTTTTTTGTCTCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACTTGCCCTCCCAGGTTCAAGCGATTCCTGTGCCTCAGCCACCCGGGTAGCTGGGATTACAGGTGTGCGCCACCATGCCCAGGTAATTTTTGTATTTTTAGTAGAGTTGGGGTTTCACCATGTTGGCCAGGCGGGTCTCGAACTTCTGACGTCAAGTGATCAGCCAGTCTCGGCATCCCAAAGTGCTGGGATTACAGGCGTGAACCACCACTCCCGGCCAGATGTCAATTTTTGTTTCCACAATTTCAAGGAAGAGAAAGCCAGTGTGACCAGAGGTCAAAAGATGAGAATGTTGGCCGGGTACGGTGGCTCATGCCTGTCATCCCACTATTTTGGGAGGCCGAGGCAGACAGATCACCTGAGGTCAAGAGTTTGAGACCAGCCTGGCTAACATGGTGAAACACCGTCTCTACTAAAAATACAAAAGAATTTGCTGGGCGTGGTGGTGCGTGCCTGTAATCCCAGCTAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2680:HG4_Ill_SVrefine2DISCOVARDovetail_9705:HG2_Ill_SVrefine2DISCOVARplusDovetail_3034:HG4_Ill_GATKHCSBGrefine_9359:HG3_Ill_GATKHCSBGrefine_8960:HG2_Ill_GATKHCSBGrefine_9071:HG3_Ill_Spiral_14169:HG4_PB_HySA_19774:HG4_Ill_GATKHCSBGrefine_9358:HG3_Ill_GATKHCSBGrefine_8959:HG2_Ill_GATKHCSBGrefine_9070:HG2_PB_PB10Xdip_6594:HG2_PB_pbsv_13537:HG2_PB_HySA_24710:HG4_PB_pbsv_13536:HG3_PB_HySA_20450:HG3_PB_pbsv_13225:HG2_10X_SVrefine210Xhap12_9489:HG4_PB_SVrefine2PBcRDovetail_6759:HG3_Ill_SVrefine2DISCOVARDovetail_9838:HG2_PB_SVrefine2Falcon2Bionano_6724:HG3_PB_SVrefine2PBcRDovetail_6410:HG2_PB_SVrefine2PBcRplusDovetail_2549:HG2_PB_SVrefine2PB10Xhap12_9777:HG4_PB_SVrefine2Falcon1Dovetail_8250:HG3_PB_SVrefine2Falcon1Dovetail_8187;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9070:HG3_Ill_GATKHCSBGrefine_8959:HG4_Ill_GATKHCSBGrefine_9358;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0665025;ClusterMaxSizeDiff=0.0665025;ClusterMaxEditDist=0.227465;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=792;DistBack=-128;DistForward=4701;DistMin=-128;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=255;REFWIDENED=12:120874912-120875166;PctSeqSimilarity=0.9994;PctSizeSimilarity=0.9987;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1304.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:0:40:2:17:./.:1:8:0:3:./.:0:6:1/1:4:83:.:2315:.
chr12	120879963	HG2_Ill_GATKHCSBGrefine_9072	A	ATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGAGAGGGCAATTATTTGCAATCAAAATTTAAAACCTTTATTTTGGCCGGGTGTGGTGACTCACACCTGTGATTCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCATGAGGTCAAGGGATCAAGACCATCCTGGACAACATGGTGAAACCTCATCTCTACTGAAAGTACAAAAATTAGCTGGGCGTGGTGGCACGCACCTGTAGTCCCAGGAGGCGGAGGTTGCAGTGAGCTCAGATCGCTCCACTGCACTCCAGCCTGGTGACAGAGGAGACTCCGTCTCAAAAAAAAAAAAAAACTTTTTTATTTTTTTTTGAGATGGAGTCTCACTCTGTTGCCCAGGGTACAGTGCAGTGGCATGATCTCAGTTCACTGCAACCTTCTCCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCGAATAGCTGGGACTACAGGCACGTGCCACCACGCTGGGCTAATTTTTTGTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9490:HG2_PB_HySA_24712:HG3_PB_pbsv_13226:HG2_PB_pbsv_13538:HG3_PB_HySA_20451:HG4_PB_HySA_19775:HG2_PB_PB10Xdip_6595:HG3_Ill_GATKHCSBGrefine_8961:HG4_Ill_MetaSV_1198:HG4_Ill_GATKHCSBGrefine_9360:HG2_Ill_GATKHCSBGrefine_9072:HG4_PB_pbsv_13537:HG2_PB_HySA_24711:HG2_PB_SVrefine2Falcon2Bionano_6725:HG2_PB_SVrefine2Falcon1plusDovetail_2681:HG4_PB_SVrefine2Falcon1Dovetail_8251:HG3_PB_SVrefine2PBcRDovetail_6411:HG3_Ill_SVrefine2DISCOVARDovetail_9839:HG3_PB_SVrefine2Falcon1Dovetail_8188:HG2_PB_SVrefine2PBcRplusDovetail_2550:HG2_PB_SVrefine2PB10Xhap12_9778:HG4_PB_SVrefine2PBcRDovetail_6760;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9072:HG4_Ill_GATKHCSBGrefine_9360;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0546358;ClusterMaxSizeDiff=0.046281;ClusterMaxEditDist=0.253247;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=591;DistBack=-128;DistForward=-1;DistMin=-128;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:120889680-120880091;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:39:1/1:0:24:0:22:./.:0:3:0:2:1/1:0:16:1/1:3:106:.:2315:.
chr12	120905615	HG3_PB_SVrefine2PBcRDovetail_6412	C	CGGCCTGGCGTGGTGGCTCAGGCCTGTAACCTCAGCATTTTGGGAGGCTGAGGTGGGTGGATCACTTGAGGTTAGGAGTTCAAGACAAACCTGGCCAACATGGAGAAACCCCATATCTGCTGAACATAGAAAAATCAGCCAGGCATGATGGCGGGCGCCTGTAATCCCAGCTACTGGGAAGCTGAGGCAGAAGAATCGATTGAACCTGGGAGGCCGAGGTTGCAGTGAGCGGAGACAGTGACATCGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCGTCTCAAAAAAATAAAGAAAAATAAAAAAAACAAATCCCTCGAACTTTTTCTCTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCAGGCTGGGATGTAGTGGCGCCATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCGAGGAACTGGGACTACAGGCGCGCGCCACCACGCCCAGCTCATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTTGTGATCCGCCCGCCTCGGCCTCCTAAAGTGCTGGGATTGCCACTAGCTTTCTATCAGTAACTCTAAATCCTCAATATCCTGATCTGTAAAATCTGGTTAACCATACA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8189:HG2_Ill_SVrefine2DISCOVARplusDovetail_3036:HG2_PB_pbsv_13539:HG3_PB_pbsv_13227:HG4_Ill_Spiral_1069:HG2_PB_PB10Xdip_6596:HG2_PB_HySA_24713:HG4_Ill_MetaSV_1199:HG4_Ill_GATKHCSBGrefine_9361:HG3_Ill_MetaSV_1238:HG3_Ill_GATKHCSBGrefine_8962:HG2_Ill_MetaSV_1122:HG2_Ill_GATKHCSBGrefine_9073:HG4_PB_HySA_19776:HG4_PB_pbsv_13538:HG2_PB_SVrefine2Falcon1plusDovetail_2682:HG4_PB_SVrefine2Falcon1Dovetail_8252:HG4_Ill_SVrefine2DISCOVARDovetail_9706:HG3_Ill_SVrefine2DISCOVARDovetail_9840:HG4_PB_SVrefine2PBcRDovetail_6761:HG3_PB_SVrefine2PBcRDovetail_6412:HG2_PB_SVrefine2PBcRplusDovetail_2551:HG2_PB_SVrefine2PB10Xhap12_9779:HG2_PB_SVrefine2Falcon2Bionano_6726:HG2_Ill_SVrefine2DISCOVARplusDovetail_3035:HG2_10X_SVrefine210Xhap12_9491;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9491:HG2_Ill_SVrefine2DISCOVARplusDovetail_3035:HG2_PB_SVrefine2Falcon2Bionano_6726:HG2_PB_SVrefine2PB10Xhap12_9779:HG2_PB_SVrefine2PBcRplusDovetail_2551:HG3_PB_SVrefine2PBcRDovetail_6412:HG4_PB_SVrefine2PBcRDovetail_6761;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0573108;ClusterMaxSizeDiff=0.0543718;ClusterMaxEditDist=0.205499;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=665;DistBack=25008;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=300;REFWIDENED=12:120905616-120905915;PctSeqSimilarity=0.9787;PctSizeSimilarity=0.9955;PctRecOverlap=0.7294;SizeDiff=-3;StartDistance=-179;EndDistance=-179;GTMatch=0;TruScore=90;MatchId=1306.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:1/1:0:23:0:16:1/1:0:10:0:9:1/1:0:19:./.:6:93:.:2315:.
chr12	121490565	HG2_Ill_MetaSV_1124	A	ACCTGTAATCCCAGCACTTCGGGGGGCCGAGGCGGGCAGATCACTTGAGGTGAGGAGTTCGAGACCAGCCTGACCAATATGGTGAAACCCCGTCTCTACTAAAAATACAGAAAATTAGCTGGGCCTGGTGGTGGGTGCCTATAATTCCAGCTACTCGGGTGGCTGAGGCAGGAGAATCACTTGAACCAGAGAGGTGGAGGCGGAGGTTGCAGTGAGCTGAGATCGCGCCACTGTATTCCAGCCTGGATGACAGACTGAGGCTCCATCTCAAAAAATAAAAAAAGGCAGGAGAGAATAGTCACTGTTATTGGTATTCTCTCAGGGATTTCATGTGAATTTTATCATTTTCCTTATGCTTTTCTGCATTGCTTTAATTTTTTTTAAAAATAAGTCTATTGTGATATTCAGATAATCAGAAAAAATTAATTATTATTATTTTTTGAGACAGGGTCTCACTCTGTCACCCAGGCTGGAGCACAGTGGTGCGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGCTCAAGCAATCTTTCCATCTCAGCCTCTTGTGTAGCTGGGACTACAGGCAAGCGCCACCTCGCCCGGCTAACTTTTGTATTTTTTTGTAAAGACGGGGTTTTGCCATGTTGCCCAGGCTGGTCTGGAACTCCTGAGCTCAAGTGATCCACCCACCTTTGCCTCCCAATAATTTAATATTTAAGAAATTTAATATACATTTTAATGTATATTAAAATAATTGCTGGAAAGACTACATAAAAAATGCAGACTACTTAGCATAGATCATGAACAGAATTAACAGTCAGTAAATGGTGGTTTTATTATTATTATTGATGTTATTGTTTTTATTAATATCTGAAGCCCCTGAGCTCTGAAGCTTGTTGAAAATCATGTTTGTACTCATCAGGAACCATTTTATTGTCCTTGAGTAAGGTGGCATTGGAACCAGGAGGTTCTAAGCAGGACACCACACTTCAGAATGTAACAGGTGGGCTGTGTGTGGTGGCTCACG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6730:HG3_PB_HySA_20457:HG2_PB_pbsv_13547:HG2_PB_PB10Xdip_6603:HG4_PB_HySA_19787:HG3_Ill_MetaSV_1240:HG4_Ill_MetaSV_1200:HG2_Ill_MetaSV_1124:HG3_Ill_GATKHCSBGrefine_8970:HG3_PB_pbsv_13235:HG4_PB_pbsv_13547:HG3_PB_SVrefine2Falcon1Dovetail_8195:HG2_PB_assemblyticsfalcon_6227:HG2_PB_assemblyticsPBcR_6044:HG4_PB_assemblyticsfalcon_6133:HG2_PB_SVrefine2PB10Xhap12_9788:HG2_PB_SVrefine2PBcRplusDovetail_2555:HG4_PB_SVrefine2Falcon1Dovetail_8256:HG4_Ill_SVrefine2DISCOVARDovetail_9708:HG4_PB_SVrefine2PBcRDovetail_6763:HG2_Ill_SVrefine2DISCOVARplusDovetail_3039:HG3_PB_SVrefine2PBcRDovetail_6416:HG3_Ill_SVrefine2DISCOVARDovetail_9845:HG2_PB_SVrefine2Falcon1plusDovetail_2687;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_MetaSV_1124:HG4_Ill_MetaSV_1200;NumExactMatchSVs=2;ClusterMaxShiftDist=0.136095;ClusterMaxSizeDiff=0.136095;ClusterMaxEditDist=0.209313;PBcalls=17;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=1009;DistBack=12;DistForward=24188;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=12:121490553-121490595;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1308.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:1:29:0:16:1/1:0:6:0:11:1/1:0:24:0/1:19:138:.:1052:.
chr12	121952534	HG4_PB_SVrefine2Falcon1Dovetail_8258	T	TCCCCTAATCGCACTCACCCATCCCCCCATTCACACTCTCCTAACCCCCATCACACTCCCCACCTCCTATTCACACTCTCCACCCTCCTATTCACACTCCCCACACGCCAATCACACTCTCCAATCCCCATCACACTCCCCACCCGCCAATCACACTCTCCAATCCCATCACACTCCCCACCCCCTCTAATCACATTCCCCATCCCTCTAATCACACACCCCATCCCCTCTAATCACACTCCCCACCCCAATCACACTCCCCACCCCCCAATCACACTCCCCACCCCCCAATCACACTACCCACCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCAATCACACTCCATCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCTCTAATCACACTCCCCACCCCCCAATCACACTCCCCACCCCCCAATCACACTCCCCACCCCCCAATCACACTCCCCACCCCCTCTAATCACACTCCCCACCCCTCTAATCACACTCCCCACCCCAATCACACTCCCCATCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCTCTAATCACACTCCCCACCCCTCTAATCACACTCCCCACCCCCATCACACTCCCCACCCCAATCACACTCCCCACCCCCCAATCACACTCCCCACCCCCTCTAATCACACTCCCCACCCCCTAATCACACTCCCCACCCCAATCACACTCCCCATCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCAATCACACTCCCCACCCCTCTAATCACACTCCCCCCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCCAATCACACTCCCCACCCCTCTAATCACACTCCCCACCCCCTAATCACACTCCCCACCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCTCTAATCACACTCCCCACCCCCTAATCACACTCCCCACCCCAGTCACACTCCCCATCCCCTCTAATCACACTCCCACCCCCACCCCCAATCACACTCCCCACCCCCCAATCACACTCCTCACCCCCTCTAATCACACTCCCCATCCCCTAATCACACTCCCCACCCCAATCACACTCCCCATCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCCAATCACACTCCTCACCCCTCTAATCACACTCCCCACCCCCTAATCACACTCCCCACCCCAATCACACTCCCCATCCCCTCTAATCACACTCCCCACCCCAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCTCTAATCACACTCCCCACCCCCTAATCACACTCCCCACCCCAATCACACTCCCCATCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCTCTAATCACACTCCCCACCCCCTAATCACACTCCCCACCCCAATCACACTCCCCATCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCTCCAATCACACTCCTCACCCCCTCTAATCACACTCCCCACCCTAATCACACTCCCCACCCCAATCACACTCCCCATCCCCTCTAATCACACTCCCCACCCCCAATCACACTCCCCACCCCCTCTAATCACACTCCCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2689:HG3_PB_pbsv_13238:HG4_PB_pbsv_13550:HG2_PB_PB10Xdip_6608:HG2_PB_pbsv_13550:HG2_PB_HySA_24726:HG2_PB_HySA_24725:HG4_PB_SVrefine2Falcon1Dovetail_8258:HG2_PB_SVrefine2Falcon2Bionano_6732:HG3_PB_SVrefine2PBcRDovetail_6418:HG3_PB_SVrefine2Falcon1Dovetail_8197:HG2_PB_SVrefine2PB10Xhap12_9791:HG2_PB_SVrefine2PBcRplusDovetail_2557;NumClusterSVs=13;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_8258;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0691443;ClusterMaxSizeDiff=0.0685681;ClusterMaxEditDist=0.224911;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1753;DistBack=-812;DistForward=-1;DistMin=-812;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=323;REFWIDENED=12:121952535-121952857;PctSeqSimilarity=0.9868;PctSizeSimilarity=0.9938;PctRecOverlap=0.9416;SizeDiff=-11;StartDistance=-97;EndDistance=-97;GTMatch=0;TruScore=97;MatchId=1309.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:64:./.:0:0:0:0:./.:0:0:0:0:1/1:0:11:0/1:11:59:.:1595:.
chr12	123386873	HG3_Ill_SVrefine2DISCOVARDovetail_9851	A	AGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGAACAGCCTGGCTAACATGGTGAAATCCTGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGCGGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGACAGGAGAATCACTTGAACCGGACAGGTGGAGGTTGCAGAGAGTCGAGATTGCGCCATTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCATCTCAAAAAAGATAAACATGTACATAAGTTAACTTTTCATTTAATAGAAGTGGGGTCTTACTACTCTGCAATGGCATTTCGGTACTGTACTTTCAGCTATACCACATTCTTTTTAACTACTGTATAGTATTCCAGAGTATACACTGTGGCATACATGGATGCATTTAGTTATGAGACAGGGTCTCATGTTATAGCCCAGGCTGGAGTGCAGTGATGAGATCATAGCTCAATGCAGCCTCAAACTCCTGGCCTGAAGCAATCCTCCCTACTCAGCCTCCTGAGTAGTTGAGACTACAGGTATGTGCCACCATGCCTGACTTACTGTGGCATTTAGATTTCTCTTTGTCCATACAATAAGCTGTGAAAAACAGCCTTGTGTACTTAATCTTTCTGTACATCTTAAGCCTATATGTAGGATAATTTCATAGAAATTGAATCACTTTTTTTTGTTGTTGTTTTTTGACAGGGTCTTTCTCTGTTGCCCAAGCTGGAGTGCAGCAGCACAATCTTGGCTCACTGCTCAAGCCTCAAGCTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCTTGAGTAGCTGGGACCATAGGCACACACCACTATGCCCTGCTATTTTTTTTTCTTTTTGAAAGACAGGGTCTTGCTATGTCGCCCAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCCTCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCAAGACTTCTTTTTAATTTTAAAAAATTAAAAAGATCCTTGGCTGGGCATGGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCCGAGGCAAGTGGATCGCTTGAGGTCAGGAGTTCCAGACCAGCCTGGGCGACATAGCAAGACCCTGTCTTTCAAAAAAAAAAAAAATAGCAGCCAGGCCAACATAGTGAAACCCCATCTCTACAAAAAAATTAAAAATTAGCTAGGCATGGTGGTGTGCACCTGTGGTCCCAGCTACTCGGAAGGCTGAGGCATAAGAATCTCTTGAACCCGGAAGGTAGATCTCGGTTACAGTGGCGTGATCTTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8205:HG2_PB_pbsv_13561:HG4_PB_pbsv_13563:HG2_PB_HySA_24744:HG3_PB_pbsv_13251:HG4_PB_HySA_19812:HG2_PB_PB10Xdip_6655:HG4_PB_assemblyticsfalcon_6158:HG4_PB_SVrefine2Falcon1Dovetail_8269:HG2_PB_SVrefine2Falcon1plusDovetail_2694:HG4_PB_SVrefine2PBcRDovetail_6771:HG4_Ill_SVrefine2DISCOVARDovetail_9722:HG3_PB_SVrefine2PBcRDovetail_6423:HG3_Ill_SVrefine2DISCOVARDovetail_9851:HG2_PB_SVrefine2PBcRplusDovetail_2563:HG2_PB_SVrefine2PB10Xhap12_9798:HG2_PB_SVrefine2Falcon2Bionano_6737:HG2_Ill_SVrefine2DISCOVARplusDovetail_3050;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3050:HG2_PB_SVrefine2Falcon2Bionano_6737:HG2_PB_SVrefine2PB10Xhap12_9798:HG2_PB_SVrefine2PBcRplusDovetail_2563:HG3_Ill_SVrefine2DISCOVARDovetail_9851:HG3_PB_SVrefine2PBcRDovetail_6423:HG4_Ill_SVrefine2DISCOVARDovetail_9722;NumExactMatchSVs=7;ClusterMaxShiftDist=0.231187;ClusterMaxSizeDiff=0.231187;ClusterMaxEditDist=0.332545;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=1313;DistBack=6727;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=228;REFWIDENED=12:123386874-123387101;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9985;PctRecOverlap=0.9437;SizeDiff=-2;StartDistance=-73;EndDistance=-73;GTMatch=0;TruScore=97;MatchId=1311.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:22:0:22:./.:0:2:0:0:1/1:0:29:./.:18:220:.:1357:.
chr12	123873678	HG4_Ill_150bpfermikitraw_17344	T	TGGCGGCGGCAGCAGCAGCAGCAGCGGCAGCGGCAGCGGTGGTGGCCGGGCCGCGGCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4431:HG3_PB_pbsv_13252:HG2_PB_pbsv_13562:HG2_PB_HySA_24747:HG4_PB_pbsv_13564:HG4_PB_assemblyticsfalcon_6160:HG4_Ill_SVrefine2DISCOVARDovetail_9725:HG4_Ill_Krunchall_18880:HG4_Ill_GATKHC_21778:HG4_Ill_GATKHCSBGrefine_9379:HG4_Ill_FB_11751:HG4_Ill_250bpfermikitraw_18019:HG4_Ill_150bpfermikitraw_17344:HG3_PB_SVrefine2PBcRDovetail_6424:HG3_Ill_manta_3089:HG3_Ill_Spiral_14183:HG3_Ill_SVrefine2DISCOVARDovetail_9858:HG3_Ill_Krunchall_18211:HG3_Ill_GATKHC_21677:HG3_Ill_GATKHCSBGrefine_8979:HG3_Ill_250bpfermikitraw_17693:HG3_Ill_150bpfermikitraw_17205:HG2_PB_SVrefine2PBcRplusDovetail_2564:HG2_PB_SVrefine2PB10Xhap12_9799:HG2_PB_SVrefine2Falcon2Bionano_6738:HG2_Ill_scalpel_12846:HG2_Ill_SpiralSDKrefine_3933:HG2_Ill_SVrefine2DISCOVARplusDovetail_3053:HG2_Ill_Krunchall_18556:HG2_Ill_GATKHC_21791:HG2_Ill_GATKHCSBGrefine_9089:HG2_Ill_250bpfermikitraw_18212:HG2_Ill_150bpfermikitraw_17157;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17157:HG2_Ill_250bpfermikitraw_18212:HG2_Ill_GATKHCSBGrefine_9089:HG2_Ill_GATKHC_21791:HG2_Ill_Krunchall_18556:HG2_Ill_SVrefine2DISCOVARplusDovetail_3053:HG2_Ill_SpiralSDKrefine_3933:HG2_Ill_scalpel_12846:HG2_PB_SVrefine2Falcon2Bionano_6738:HG2_PB_SVrefine2PB10Xhap12_9799:HG2_PB_SVrefine2PBcRplusDovetail_2564:HG3_Ill_150bpfermikitraw_17205:HG3_Ill_250bpfermikitraw_17693:HG3_Ill_GATKHCSBGrefine_8979:HG3_Ill_GATKHC_21677:HG3_Ill_Krunchall_18211:HG3_Ill_SVrefine2DISCOVARDovetail_9858:HG3_Ill_Spiral_14183:HG3_Ill_manta_3089:HG3_PB_SVrefine2PBcRDovetail_6424:HG4_Ill_150bpfermikitraw_17344:HG4_Ill_250bpfermikitraw_18019:HG4_Ill_FB_11751:HG4_Ill_GATKHCSBGrefine_9379:HG4_Ill_GATKHC_21778:HG4_Ill_Krunchall_18880:HG4_Ill_SVrefine2DISCOVARDovetail_9725:HG4_PB_assemblyticsfalcon_6160;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0826446;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.225806;PBcalls=9;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=59;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=12:123873679-123873687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:./.:0:2:0:11:./.:0:0:0:0:1/1:0:54:./.:.:.:.:.:.
chr12	124719464	HG2_PB_SVrefine2PB10Xhap12_9805	G	GTCACCACCACCACCACCATCACCACCATCACCTCCATCATCACCATTACCACCATAATCATCATCATCAATACCACCACCACCATCACCACCATCACCATCATCACCATCACCATCATTAACACCATCATCACCACCATCACCATCACCACCACCATCATCACCATCACTGTCACCACCACCATCATCACCACCACCATCACCATCATCACCATCACCATCACCATCATCACCACCACCTCCATCATCACCATTACCACCATAATCATCATCAATACCACCACCACCATCACTACCATCATCACCATCACCACCATCATCCCCATCACCATCATCACCATCACCATCATCACCACCACCATCACCACCACCATCACCACCACCACCACCATCACCACCACCATCACCACCACCACCATCACCACCATCATCACCATCACCATCACCATCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8211:HG4_PB_pbsv_13574:HG2_PB_pbsv_13570:HG3_PB_pbsv_13259:HG4_PB_HySA_19827:HG4_Ill_MetaSV_1204:HG4_Ill_GATKHC_21785:HG2_Ill_GATKHCSBGrefine_9095:HG3_Ill_GATKHC_21686:HG4_Ill_GATKHCSBGrefine_9385:HG2_PB_PB10Xdip_6664:HG2_Ill_breakscan11_4433:HG2_PB_SVrefine2Falcon1plusDovetail_2700:HG2_PB_SVrefine2Falcon2Bionano_6743:HG3_PB_SVrefine2PBcRDovetail_6428:HG2_PB_SVrefine2PBcRplusDovetail_2567:HG2_PB_SVrefine2PB10Xhap12_9805:HG4_PB_SVrefine2Falcon1Dovetail_8274;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9805:HG2_PB_SVrefine2PBcRplusDovetail_2567:HG3_PB_SVrefine2PBcRDovetail_6428;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0826986;ClusterMaxSizeDiff=0.0761698;ClusterMaxEditDist=0.134472;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=450;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=219;REFWIDENED=12:124719465-124719683;PctSeqSimilarity=0.9872;PctSizeSimilarity=0.9933;PctRecOverlap=0.867;SizeDiff=3;StartDistance=-58;EndDistance=-58;GTMatch=0;TruScore=94;MatchId=1313.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:0:8:2:19:1/1:3:69:4:83:1/1:0:16:1/1:2:99:.:.:.
chr12	124863563	HG2_Ill_scalpel_12860	A	ATGGGACAAGGAGCACAAGGGCAGCACTCAGAGGGTCGCGCGGGTGAAACGGGG	20	PASS	ClusterIDs=HG3_PB_pbsv_13268:HG3_PB_HySA_20500:HG4_PB_HySA_19840:HG4_Ill_svaba_17041:HG4_Ill_Krunchall_18897:HG4_Ill_250bpfermikitraw_18035:HG4_Ill_150bpfermikitraw_17355:HG3_Ill_svaba_17130:HG3_Ill_scalpel_13096:HG3_Ill_Krunchall_18226:HG3_Ill_250bpfermikitraw_17708:HG3_Ill_150bpfermikitraw_17216:HG2_Ill_svaba_16998:HG2_Ill_scalpel_12860:HG2_Ill_Krunchall_18573:HG2_Ill_250bpfermikitraw_18232:HG2_Ill_150bpfermikitraw_17170:HG2_PB_HySA_24773:HG2_PB_PB10Xdip_6671:HG4_Ill_manta_3201:HG4_Ill_Cortex_840:HG3_Ill_manta_3091:HG3_Ill_Spiral_14199:HG3_Ill_Cortex_884:HG2_Ill_manta_3764:HG2_Ill_SpiralSDKrefine_3944:HG2_Ill_Cortex_2009:HG4_PB_pbsv_13586;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17170:HG2_Ill_250bpfermikitraw_18232:HG2_Ill_Krunchall_18573:HG2_Ill_scalpel_12860:HG2_Ill_svaba_16998:HG3_Ill_150bpfermikitraw_17216:HG3_Ill_250bpfermikitraw_17708:HG3_Ill_Krunchall_18226:HG3_Ill_scalpel_13096:HG3_Ill_svaba_17130:HG4_Ill_150bpfermikitraw_17355:HG4_Ill_250bpfermikitraw_18035:HG4_Ill_Krunchall_18897:HG4_Ill_svaba_17041;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0733945;ClusterMaxSizeDiff=0.0550459;ClusterMaxEditDist=0.183486;PBcalls=6;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=-1;DistForward=37665;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=46;REFWIDENED=12:124863537-124863582;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1317.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:1/1:0:10:3:20:./.:0:11:1:16:1/1:1:44:./.:.:.:.:.:.
chr12	125392298	HG3_Ill_manta_3093	A	AATATATGAATATATATATGAATATATATATATATGAATATATGAATATATAT	20	PASS	ClusterIDs=HG2_PB_HySA_24787:HG4_Ill_250bpfermikitraw_18040:HG3_PB_pbsv_13274:HG4_Ill_150bpfermikitraw_17359:HG2_Ill_250bpfermikitraw_18237:HG2_Ill_150bpfermikitraw_17177:HG4_Ill_manta_3203:HG3_Ill_manta_3093:HG3_Ill_Spiral_14207:HG3_Ill_250bpfermikitraw_17715:HG3_Ill_150bpfermikitraw_17226;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_150bpfermikitraw_17226:HG3_Ill_250bpfermikitraw_17715:HG3_Ill_Spiral_14207:HG3_Ill_manta_3093:HG4_Ill_manta_3203;NumExactMatchSVs=5;ClusterMaxShiftDist=0.163636;ClusterMaxSizeDiff=0.145455;ClusterMaxEditDist=0.234234;PBcalls=2;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=7;DistForward=4366;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2160;REFWIDENED=12:125392251-125382576;PctSeqSimilarity=0.9808;PctSizeSimilarity=0.9615;PctRecOverlap=0.9623;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=1318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:12:27:./.:10:6:1:20:./.:0:10:5:7:0/1:19:33:./.:.:.:.:.:.
chr12	125484156	HG2_PB_SVrefine2PB10Xhap12_9814	T	TATTTATTTATTTATTTATTTTTCTTGAGACGGAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATTTCGGCTCACTGCAAGCTCCACCTCCTGGGTTCATGCCATTCTTCTGCTTCAGCCTCCCAAGTGGCTGGGACTACAGGCGCCTGCCACCATGCCCAGCTAATTTTTTTGTGTGTTTTTAGTAGAGACGGGGTTTCACTGTGTTCGCCAGGATGGTTTCGATTTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCCTTAAGTTTTTTATTTTTTGTAGAGGTGCGGTTTCACTCTATTGCCCAGGCTGGTCTCTAACTCCTGGCCTCCAGTGATCTACCTGCCTCAGCCTCCCAAAGTGCTGGCATTACGGGCGTGAGCCACTGCGCCGGCCCCTGTTTTTAAAAATGAATAAATTTTGGGCTGGGTGCGGTGCCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACAAGGTCAGGAGATCGAGACCATCCTGGCGAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTATCCGAGTGTGGCAGTGTGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGGATGGCGTGAACCCGGGAGGCAAAGCTTGTAATGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCAACACTCTGTCTCAAAAAAAAGAGAATAAATGTTGGAGGGCTGGGTACAGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCTGAGGCAGGTAGATCACCTGAGGTCGAGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGCCTGGTGGCATGTGCCTGTAGTCCCACCTACTCGGAAGGCTGACACAGGAGAATCGCTTGAACCCCGGAGGTGGAGGTTATAGTGAGTAGAGATCACGCCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTGTCTCAAAAAAAGGAAGATCAGAACTTATCAGTACATAAACTTTGCTTCCTCCTTGTGAAGGGCTGCAAAGAGCTCATTGCTGTAAGGATGTGCCAGCGTTAAACCTGCCCCTGGTAGCTAACATTTGATCCTGTCTCGGGCCACTCTAAACATGGCTGCAGTGTAGGTCTTTCTGTATGTATTGTTTTGTGTGCACCTAGACAAGTTCATCTGTAAATTGTTAGAAATGGAATTGCTGAGTCAAAGGGTCTGTGCATTTAAAAAGAAGTTTTTTTTTTTTTGAGATGGAGTCTCGCTGTGTCACCAAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCGCCACCACGCCCTGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGATCGCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCACGCCCGGCCTTTTTTTTTTTTTTTTTTTTTTAAGAGATAGGTTCGTGCTCTGTCACCCAGGCTGAAATGCAGTGGTGAAATCATAGCTCACTGAAGCCTTGGACTCCTCGCTTCAAGTAGTCCTAACCTCAGCCTCCCAAAGTGCTGGGATTACAGGGGTGAGCCAGCACTCCCTGCTCTTTTACTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAGACGGAGTTTCATTCTTCTTGCCCAGGCTGGAGTGCAATGGCATGATCTCGGCTCACTGCAACCTCTGACTCCTGGGTTCAAGTGATTCTCCTTCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCATGCCTCCACACCCAGCTACTTTTGTATTTTTAGTAGAGACAGGGTTTCTCCATGTTGGTCAGGCTGGTGTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTGCCGGGATTACAGGCGTGAGACACTGCGCTTGGCCTCTTTTACATTTTTCATCGAAATGTCATTGGTATACGTTTTTTGCTTACATCAATCTATAGCATCATGAATTGTCACACACAGAACACACTCCTTGACCAGCAGATCTAAAAATGGATTGTTCCAGCCTCCAGAAGTCCCTTTCTGCTCCCACATGGTTACTAACCCCCTAAGGTCGCTACTGTGTGTGCTACCCATGTGAATTAACTCTGTTTGCTTGAGCCCTTGCATAGTAAGGGCTCTATATGCATTGTTCATATTGCAAAGATACTACTAAATGGTCCTTCAAAGGGTGATAGCAGTTTCTACTCTCACCAGACACGTGTGAAGGCTAGTTCCCAAGCCCTTTCCAACGAAGTGGCTCGTTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6438:HG2_PB_pbsv_13587:HG4_PB_HySA_19852:HG4_PB_pbsv_13591:HG2_PB_pbsv_13586:HG3_PB_pbsv_13276:HG3_PB_HySA_20510:HG2_PB_HySA_24790:HG2_PB_PB10Xdip_6675:HG4_PB_SVrefine2Falcon1Dovetail_8287:HG4_Ill_SVrefine2DISCOVARDovetail_9732:HG4_PB_SVrefine2PBcRDovetail_6783:HG3_Ill_SVrefine2DISCOVARDovetail_9865:HG2_PB_SVrefine2Falcon1plusDovetail_2711:HG3_PB_SVrefine2Falcon1Dovetail_8223:HG2_PB_SVrefine2Falcon2Bionano_6751:HG2_PB_SVrefine2PBcRplusDovetail_2574:HG2_PB_SVrefine2PB10Xhap12_9814;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9814:HG2_PB_SVrefine2PBcRplusDovetail_2574;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0549299;ClusterMaxSizeDiff=0.0549299;ClusterMaxEditDist=0.236791;PBcalls=16;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=2470;DistBack=2395;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=310;REFWIDENED=12:125484157-125484466;PctSeqSimilarity=0.9888;PctSizeSimilarity=0.9964;PctRecOverlap=0.8919;SizeDiff=9;StartDistance=-262;EndDistance=-262;GTMatch=0;TruScore=95;MatchId=1319.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:72:1/1:1:17:3:24:./.:0:0:0:4:1/1:0:12:1/1:10:331:.:2455:.
chr12	125520704	HG3_Ill_GATKHC_21701	A	AGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACGTGCCACCATGCCCAGCTATTTTTTTTTTTTTTTAGACAGAGTCTTGCTCTTTCACCCAGGGTAGAGTGCAATGGCACTATCTCGGCTCACTGCAACCTCCGCCTCCTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6439:HG3_PB_assemblyticsfalcon_6279:HG3_PB_HySA_20511:HG2_PB_pbsv_13588:HG2_PB_PB10Xdip_6676:HG4_PB_HySA_19853:HG4_PB_pbsv_13592:HG3_PB_SVrefine2Falcon1Dovetail_8224:HG3_Ill_GATKHCSBGrefine_8990:HG4_Ill_GATKHC_21807:HG4_Ill_GATKHCSBGrefine_9397:HG3_Ill_MetaSV_1249:HG3_Ill_GATKHC_21701:HG2_Ill_manta_3766:HG2_Ill_SVrefine2DISCOVARplusDovetail_3065:HG2_Ill_MetaSV_1132:HG2_Ill_GATKHC_21814:HG2_Ill_GATKHCSBGrefine_9108:HG2_PB_HySA_24791:HG3_PB_pbsv_13277:HG3_Ill_SVrefine2DISCOVARDovetail_9866:HG2_PB_SVrefine2PBcRplusDovetail_2575:HG2_PB_SVrefine2PB10Xhap12_9815:HG2_PB_SVrefine2Falcon2Bionano_6752:HG2_PB_SVrefine2Falcon1plusDovetail_2712:HG2_Ill_SVrefine2DISCOVARplusDovetail_3064:HG2_10X_SVrefine210Xhap12_9524:HG4_PB_SVrefine2Falcon1Dovetail_8288;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9108:HG2_Ill_GATKHC_21814:HG2_Ill_MetaSV_1132:HG2_Ill_SVrefine2DISCOVARplusDovetail_3065:HG2_Ill_manta_3766:HG3_Ill_GATKHC_21701:HG3_Ill_MetaSV_1249:HG4_Ill_GATKHCSBGrefine_9397:HG4_Ill_GATKHC_21807;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0771513;ClusterMaxEditDist=0.286533;PBcalls=15;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=162;DistBack=-52;DistForward=17339;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=144;REFWIDENED=12:125520614-125520757;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1320.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:2:36:3:22:./.:1:4:3:9:./.:3:29:./.:.:.:.:.:.
chr12	125801147	HG2_PB_PB10Xdip_6680	A	CTGAGTAGATGATTTTCTTTTTTTTTTTTTTTTTTTTTTTACAGGATATATCAACATTTACTACTCATCTGTCATGTTAGGAAAAACATCATTATTACACGCTTGGAAAATCCTCAAACCCATCTCTAGTGCATGTCCGTCATAATTTAAAGGGTATTTTCCCCATTCAAATAAAACAATCTCTTGTAAAGCTACAATAGTTATATACCAAAGCAATACCTAGTTACATGCTTTACACAGTCCCGTGAAAAAATAATTTAATTGCTCCTAATCCCTGATGCAAGGCACTTCAAAGCACCCGCACAAAACGTCCATGTAAACAGCAGTACAGTACATCATTTAAATAACATAAATGACTTTTACACAGCTTGACCTAGGAAAAAATAAAATCCATCATAGCCACAGCTAAAAAGCATGTTAAGATTCACAATAAGAATTTGTTTCTCTTATTATAAAGAGAAGAGCAATCATATAACCTCCTGGGGGTGGGGGAGACCTCATAAATATTTTATATTGATTGACAAAACAGCATGCTCCCTGGGTACGTATGAAATCAGAATATTCAGGAGTAACTGAGAGGATGCAAATAACATTTCTTAGTACCCAGCTTTAATATCTACCAGACCTGGTAGTCTGGATTATTTGTAGCACCATGGAAAACTCATTAGAAAATCACAAAGGTATACACCTCAACCTTTCCATGAGGTTCATTTAATTTATAGTAACAAACAGCAATGATGCAGATAAAGAATCTTTAAAATTATTGGCTTACTGGATTTACCTAGCAAGAAAAATTCTATATTACTTATTTTAGTACATCTCATGTACATAAAGCACCAGTTTAAATGAGAGTATCAAATATCTCCAGCATCTTTTTGCTTAGCCTAGAAGTTCATTTCTTATCACTTTCCATGGCACACTCTTAAAGCCAAGGAAGATAAAACTAGAATGGTTATAAATATGAATGGAGAAATTCAGTTCCTTCCCTATCATATTTACATGTCTCAAGTAAAACACAGATGAGTGGCAAAAGGTCTACTGCATTCTCTGGAACCTGCCACCCCAGAGTAGTTAACTGGCTACTAGAGGATTAACACACAGGGCTGAGCAGGTCAAAGCCAGGGCTCTGTCAGGTAAGGGCCAGTTTTTACTACTGAGCAACTCACAAACACCACTGGTAAAGCAAAGAGGTCTGAGTGTGCATATAGCTCAGGGAACCCTGAGTTTACGCTTAGTTACCACTAAAAACTAACAAATGAGACTCCACTGAGGCTTAACTTCATATACAAAAATCAACACCTTTGCCTCTTTGACAGTGGTAATTATTAGCATGCCCTTCTTAGGTATAAAAGGGATAATGGTATATCTAGGTTTATGCACAGTTAAGAATCAACTATAAATATTCAGACTTGTATTTTAAAATTACAGATTAAAAGTGACTCCCAAAAGAAAATCAATTTCTTCATAAATGAAATATAGTATATAAAAAGCTGGAATGATAATTAATTCAAATACAAAAGCTAGTATACAAAAACCCTACTTTTTCTTCCAAACTACTTAGGTTCATACGGTTCACACTACCACACAACTGTTCTACATTACAATTACACCACTAGAGTAAAATACTAATAAAACACTTCAGTTAGCAAACTGAGGTTCTACTTGTTGACAACTGCATTAAAACTGCAGCATTTAAGCAGAGCTGAGAAGCACCATTCTTAAGCATGGCTTTCTTCTTCCTGTTCTTGTGTTCCACAGTGATTACTAAAGGAAGGAATTTGGTCTGTAAATGACTGGGTCATCCACTGCCCATTAGGAATGCCACTGAAAGCTGATTCTCCTCTTAACTCCACGCTCTCAATTAGCCCATTTGAAGAGAAGCCACAAGGTTCACTGCTGCATGGATTTTCTCCGTAAGCACCACCATATGCTGCCTCATAACCTGGATCATATTTTTCTTCCTTAACAGCCATCTTCTTTGCATCCTCTTGGGCAAGCTGTAGGTCAAATGTATATTGCACCTCTTGAACGTCCATATTTCGTTCAATGCCTTTCAACTGATCTCTTAAGTCCTTCAGTTTTATGTAGTAATGAACTTTGTCTTGGGCTCGAGGAAACTGAGCACATCTTGCACTGGATGATGGCATAACATAGCAGAGAGTTTCTGTGTCTGGAATCTTATGGGGCTGAAGCCCAAATTCCAAGTTCTTAACCTTTACTCCAAAAACTTCTTTACTAAAAATTTCATAAATACATTTTCCATTAAACACTGCTATTCGTGGCTGATATTTCTGTAATTTCTGTACTAGAATACGTCCTCCTTCACGAAATTCTTTACTGGAGAGATCTGTGCTGCCGGGCGTGGTCCTTTCCACCATGTTGGTAAATCCAATACCATACTTCCCTGGTAGAGTGTGATCATCCATATGGTTCAGCTGGACTTCACTGAGCCCTGACATAAACAAACACTTCCAAAAATGGTTTCCAGGTCCAGGGTAATGATGCCCTTTGTAAGCAGCCATTAGTCCCGGGTTTATGCCAATAATGACAATGTCCAGATTGAAGGTCAAAATATCGGGGAGAGTCTTGGTCAGAAGTTCAGCTTCTGAAACACCATTAAAACGGTCTACTTTTCTTTTTACTTTAAATGTGTCTGTAATTTTTTTCTTGTTTTTCTTTTGATTTTGCAGACTTGCCAGATTTTTTTGACTCAACAGGTTTTTTGGGTTCCACTGGTTGTTTTGGTTCTGTTGTTCTGGGTTTTCTTTTTCTTCCTTTTGGAGCCTCTTGCACTGGTTCCTGAGCAGGAGCTGGGGCTGGAACTTCTTCTGGCATTTGCTGTTCATTCACAACTGCCATATTAGGAGCTTCAGCCATCAGTTGTTGAAATGGAAACGTATAAAAAGCTTGAGCTTGCTGAAGGGAATAGCTGCCCGCGTTCTCCGCTTCCATTCCCCGAGGCCGCTGATGCGGGCGGCTCCACCTGCCAGGCACACGGGCAGCCAGTCTCTGTAGTACCGCGTGGTACTCACTGCGGTAAGACAACCCCAGAGACCTGGGCCCGATGGCTGGCAGTACCCAGACAGTGGCCGGACTCAAGCTCCTCCTCCAGGCTTCTACCGTCCCCCACGGACCCCC	20	PASS	ClusterIDs=HG2_PB_HySA_24797:HG2_Ill_breakscan11_4436:HG2_PB_PB10Xdip_6680:HG3_PB_HySA_20513:HG2_PB_HySA_24798;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_6680;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0117237;ClusterMaxSizeDiff=0.0114068;ClusterMaxEditDist=0.0530554;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=3137;DistBack=0;DistForward=17;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=12:125801148-125801146;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:73:0|1:26:0:0:51:./.:35:0:2:15:0/1:29:17:0/1:113:242:.:3171:.
chr12	125945796	HG2_Ill_SVrefine2DISCOVARplusDovetail_3071	A	ATGGAAGGAGGAGATTCTCAGAGTCAGGGTCAGACCCACACATGCTTACTGTGGCCAGGCTGATCACAGGTACTGAGACTGAAGGGCTGGTGCTGGCC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3071:HG4_PB_pbsv_13598:HG4_PB_HySA_19859:HG2_PB_HySA_24799:HG2_PB_pbsv_13595:HG4_Ill_250bpfermikitraw_18050:HG2_Ill_250bpfermikitraw_18248:HG4_PB_SVrefine2PBcRDovetail_6787:HG2_PB_SVrefine2Falcon2Bionano_6754;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3071:HG4_PB_SVrefine2PBcRDovetail_6787:HG2_PB_SVrefine2Falcon2Bionano_6754;NumExactMatchSVs=3;ClusterMaxShiftDist=0.06;ClusterMaxSizeDiff=0.04;ClusterMaxEditDist=0.22;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=97;DistBack=23691;DistForward=3835;DistMin=3835;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=194;REFWIDENED=12:125945797-125945990;PctSeqSimilarity=0.975;PctSizeSimilarity=1;PctRecOverlap=0.7732;SizeDiff=0;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=91;MatchId=1322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:19:./.:16:4:9:9:./.:5:3:5:0:0/1:30:7:./.:.:.:.:.:.
chr12	126191050	HG4_PB_pbsv_13603	T	TAGTGAGGGGATGCAGGGGAGAGGGGGAGAGCGGGAGAGGGGAGAGGGAAGGGGAGAGGCGCGAGAGGGGAGAGGGGGAACCGAGGGGAGAGGTGAGACCGGGAGAGGGGAGAGGGGAGAGGGAGAGGGGAGATGGAGAGGGGAGAGGGTGAGAGGCGGAGAAGGAGCAGGGGAGAGGGAGAGGGGAGGAC	10	PASS	ClusterIDs=HG2_PB_pbsv_13598:HG4_PB_HySA_19867:HG4_PB_pbsv_13603:HG2_PB_HySA_24803;NumClusterSVs=4;ExactMatchIDs=HG4_PB_pbsv_13603;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0359897;ClusterMaxSizeDiff=0.0359897;ClusterMaxEditDist=0.267352;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=190;DistBack=12335;DistForward=17306;DistMin=12335;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=81;REFWIDENED=12:126190972-126191052;PctSeqSimilarity=0.9113;PctSizeSimilarity=0.9596;PctRecOverlap=0.9397;SizeDiff=-8;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=93;MatchId=1323.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:36:./.:8:20:34:12:./.:0:5:19:1:0/1:9:1:./.:.:.:.:.:.
chr12	126340809	HG3_Ill_svaba_17146	A	ATGTCATCTTCAGATGACTGGCTGGCAGCCATGCTGGAGGATACACAACGG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17194:HG4_PB_HySA_19871:HG2_PB_HySA_24808:HG4_PB_pbsv_13604:HG2_Ill_breakscan11_4437:HG2_PB_pbsv_13599:HG3_PB_HySA_20528:HG4_PB_assemblyticsfalcon_6204:HG4_PB_SVrefine2PBcRDovetail_6790:HG4_Ill_svaba_17056:HG4_Ill_scalpel_12578:HG4_Ill_SVrefine2DISCOVARDovetail_9739:HG4_Ill_Krunchall_18918:HG4_Ill_GATKHC_21819:HG4_Ill_GATKHCSBGrefine_9405:HG4_Ill_FB_11773:HG4_Ill_250bpfermikitraw_18058:HG4_Ill_150bpfermikitraw_17374:HG3_PB_SVrefine2PBcRDovetail_6443:HG3_PB_SVrefine2Falcon1Dovetail_8231:HG3_Ill_svaba_17146:HG3_Ill_SVrefine2DISCOVARDovetail_9872:HG3_Ill_Krunchall_18245:HG3_Ill_GATKHC_21711:HG3_Ill_GATKHCSBGrefine_8996:HG3_Ill_250bpfermikitraw_17725:HG3_Ill_150bpfermikitraw_17240:HG2_Ill_svaba_17013:HG2_Ill_Krunchall_18596:HG2_Ill_GATKHC_21827:HG2_Ill_GATKHCSBGrefine_9115:HG2_Ill_250bpfermikitraw_18255;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17194:HG4_PB_SVrefine2PBcRDovetail_6790:HG4_Ill_svaba_17056:HG4_Ill_scalpel_12578:HG4_Ill_SVrefine2DISCOVARDovetail_9739:HG4_Ill_Krunchall_18918:HG4_Ill_GATKHC_21819:HG4_Ill_GATKHCSBGrefine_9405:HG4_Ill_FB_11773:HG4_Ill_250bpfermikitraw_18058:HG4_Ill_150bpfermikitraw_17374:HG3_PB_SVrefine2PBcRDovetail_6443:HG3_PB_SVrefine2Falcon1Dovetail_8231:HG3_Ill_svaba_17146:HG3_Ill_SVrefine2DISCOVARDovetail_9872:HG3_Ill_Krunchall_18245:HG3_Ill_GATKHC_21711:HG3_Ill_GATKHCSBGrefine_8996:HG3_Ill_250bpfermikitraw_17725:HG3_Ill_150bpfermikitraw_17240:HG2_Ill_svaba_17013:HG2_Ill_Krunchall_18596:HG2_Ill_GATKHC_21827:HG2_Ill_GATKHCSBGrefine_9115:HG2_Ill_250bpfermikitraw_18255;NumExactMatchSVs=25;ClusterMaxShiftDist=0.132075;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.234234;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=13;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=9854;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=55;REFWIDENED=12:126340810-126340864;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:0|1:30:2:0:29:1|0:0:18:14:1:0/1:30:31:./.:.:.:.:.:.
chr12	126889863	HG3_PB_SVrefine2Falcon1Dovetail_8235	A	ATGAAGTAACTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACATTTTAGCCGGGATGGTCTCGATCTCCTGACCCCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4438:HG2_PB_pbsv_13602:HG3_PB_pbsv_13290:HG2_PB_SVrefine2Falcon2Bionano_6759:HG3_PB_SVrefine2Falcon1Dovetail_8235:HG2_PB_SVrefine2Falcon1plusDovetail_2719;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8235;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0530973;ClusterMaxSizeDiff=0.0471976;ClusterMaxEditDist=0.107715;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=333;DistBack=11;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=12:126889864-126889879;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.9911;PctRecOverlap=0.9881;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:35:0|1:40:1:3:27:./.:14:0:0:4:0/1:24:6:0/1:7:28:.:.:.
chr12	127184521	HG4_Ill_250bpfermikitraw_18067	T	TATATACATATATGTGCATATATACATATATGTACATATATACATATATGTAC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17207:HG2_PB_HySA_24820:HG4_Ill_svaba_17065:HG4_Ill_Krunchall_18932:HG4_Ill_250bpfermikitraw_18067:HG2_Ill_svaba_17024:HG2_Ill_Krunchall_18608:HG2_Ill_250bpfermikitraw_18271;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17207:HG4_Ill_svaba_17065:HG4_Ill_Krunchall_18932:HG4_Ill_250bpfermikitraw_18067:HG2_Ill_svaba_17024:HG2_Ill_Krunchall_18608:HG2_Ill_250bpfermikitraw_18271;NumExactMatchSVs=7;ClusterMaxShiftDist=0.156522;ClusterMaxSizeDiff=0.156522;ClusterMaxEditDist=0.191304;PBcalls=1;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=19;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=5;REFWIDENED=12:127184520-127184527;PctSeqSimilarity=0.9128;PctSizeSimilarity=0.8387;PctRecOverlap=0.4762;SizeDiff=-10;StartDistance=-28;EndDistance=-28;GTMatch=0;TruScore=74;MatchId=1327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:26:./.:28:14:12:13:./.:9:9:30:0:0/1:26:32:./.:.:.:.:.:.
chr12	127486305	HG3_Ill_150bpfermikitraw_17255	A	AATATATATATACACACATACATAAATATATGTATGTGTGTATATATATACACACATACATAAATATATGTGTGT	20	PASS	ClusterIDs=HG3_PB_HySA_20547:HG3_Ill_Spiral_14226:HG2_Ill_SpiralSDKrefine_3967:HG3_PB_pbsv_13298:HG2_PB_pbsv_13611:HG3_Ill_GATKHC_21729:HG3_Ill_GATKHCSBGrefine_9002:HG2_Ill_breakscan11_4439:HG2_Ill_GATKHC_21844:HG2_Ill_GATKHCSBGrefine_9124:HG2_PB_HySA_24826:HG3_Ill_svaba_17161:HG3_Ill_Krunchall_18262:HG3_Ill_250bpfermikitraw_17745:HG3_Ill_150bpfermikitraw_17255:HG2_Ill_svaba_17027:HG2_Ill_Krunchall_18612:HG2_Ill_250bpfermikitraw_18274:HG2_Ill_150bpfermikitraw_17210:HG2_PB_HySA_24825;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17210:HG2_Ill_250bpfermikitraw_18274:HG2_Ill_Krunchall_18612:HG2_Ill_svaba_17027:HG3_Ill_150bpfermikitraw_17255:HG3_Ill_250bpfermikitraw_17745:HG3_Ill_Krunchall_18262:HG3_Ill_svaba_17161;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0671141;ClusterMaxSizeDiff=0.0526316;ClusterMaxEditDist=0.169935;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=4;DistForward=20;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=60;REFWIDENED=12:127486306-127486365;PctSeqSimilarity=0.9935;PctSizeSimilarity=0.9865;PctRecOverlap=0.9467;SizeDiff=1;StartDistance=-3;EndDistance=-3;GTMatch=0;TruScore=97;MatchId=1329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:34:0|1:31:2:2:38:0|1:30:0:0:30:0/1:22:20:./.:.:.:.:.:.
chr12	127967015	HG2_Ill_250bpfermikitraw_18285	C	CTGGAAAAACAATACCCCATCCCATCAACCCTTCACCTCTGCCGATCTCCTCAAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3085:HG2_PB_pbsv_13620:HG3_PB_HySA_20556:HG2_PB_HySA_24838:HG3_PB_pbsv_13306:HG4_PB_assemblyticsfalcon_6227:HG3_Ill_Krunchall_18273:HG3_Ill_GATKHC_21740:HG3_Ill_GATKHCSBGrefine_9011:HG3_Ill_250bpfermikitraw_17756:HG3_Ill_150bpfermikitraw_17265:HG2_Ill_Krunchall_18624:HG2_Ill_GATKHC_21857:HG2_Ill_250bpfermikitraw_18285:HG3_PB_SVrefine2PBcRDovetail_6458:HG3_Ill_SVrefine2DISCOVARDovetail_9889:HG2_PB_SVrefine2PBcRplusDovetail_2588:HG2_PB_SVrefine2Falcon2Bionano_6769:HG2_PB_SVrefine2Falcon1plusDovetail_2732;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18285:HG2_Ill_GATKHC_21857:HG2_Ill_Krunchall_18624:HG3_Ill_150bpfermikitraw_17265:HG3_Ill_250bpfermikitraw_17756:HG3_Ill_GATKHCSBGrefine_9011:HG3_Ill_GATKHC_21740:HG3_Ill_Krunchall_18273:HG4_PB_assemblyticsfalcon_6227;NumExactMatchSVs=9;ClusterMaxShiftDist=0.110092;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.230089;PBcalls=9;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=-75;DistForward=62;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=107;REFWIDENED=12:127966984-127967090;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1330.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:1|0:4:36:29:5:./.:5:23:14:1:0/1:21:14:./.:.:.:.:1500:.
chr12	128118715	HG3_Ill_250bpfermikitraw_17759	C	CGGAAGGATGGAGGTGCTCCCTCCTATCACAGGTTTGGAAGGATGGAGGTGCTCCCTCTTAGCACAGGCTT	20	PASS	ClusterIDs=HG4_PB_pbsv_13627:HG3_PB_HySA_20559:HG4_PB_HySA_19895:HG2_PB_PB10Xdip_6694:HG4_PB_assemblyticsfalcon_6232:HG3_PB_pbsv_13310:HG3_Ill_250bpfermikitraw_17759:HG2_Ill_250bpfermikitraw_18289:HG2_PB_HySA_24844;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18289:HG3_Ill_250bpfermikitraw_17759:HG4_PB_assemblyticsfalcon_6232;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.028169;ClusterMaxEditDist=0.35461;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=-56;DistForward=8;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=294;REFWIDENED=12:128118647-128118940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:./.:0:3:0:12:./.:2:0:5:0:0/1:10:5:./.:.:.:.:.:.
chr12	128391065	HG2_Ill_250bpfermikitraw_18297	A	AAATTTGTAAAATTAGTATCGTGTCTTTCTTAAATATTTGGTAGAATTCAACGGTTAAACCATTTGGAACTGGACTTTTCTTTAAAGAACTTTTTAAACTAATAATGCAATATTAT	20	PASS	ClusterIDs=HG2_PB_pbsv_13630:HG4_PB_assemblyticsfalcon_6236:HG4_Ill_GATKHCSBGrefine_9418:HG3_Ill_GATKHCSBGrefine_9014:HG2_Ill_GATKHCSBGrefine_9134:HG2_PB_PB10Xdip_6697:HG3_PB_HySA_20564:HG4_PB_SVrefine2Falcon1Dovetail_8311:HG4_PB_SVrefine2PBcRDovetail_6803:HG4_Ill_SVrefine2DISCOVARDovetail_9752:HG4_Ill_MetaSV_1216:HG3_PB_SVrefine2PBcRDovetail_6462:HG3_Ill_SVrefine2DISCOVARDovetail_9892:HG3_Ill_250bpfermikitraw_17767:HG3_Ill_150bpfermikitraw_17275:HG2_PB_SVrefine2PBcRplusDovetail_2594:HG2_PB_SVrefine2PB10Xhap12_9832:HG2_PB_SVrefine2Falcon2Bionano_6773:HG2_PB_SVrefine2Falcon1plusDovetail_2736:HG2_Ill_SVrefine2DISCOVARplusDovetail_3088:HG2_Ill_MetaSV_1144:HG2_Ill_250bpfermikitraw_18297:HG2_Ill_150bpfermikitraw_17227:HG2_10X_SVrefine210Xhap12_9547:HG3_PB_SVrefine2Falcon1Dovetail_8254:HG3_Ill_Spiral_14240:HG2_PB_HySA_24852:HG4_PB_pbsv_13630:HG3_PB_pbsv_13314;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9547:HG2_Ill_150bpfermikitraw_17227:HG2_Ill_250bpfermikitraw_18297:HG2_Ill_MetaSV_1144:HG2_Ill_SVrefine2DISCOVARplusDovetail_3088:HG2_PB_SVrefine2Falcon1plusDovetail_2736:HG2_PB_SVrefine2Falcon2Bionano_6773:HG2_PB_SVrefine2PB10Xhap12_9832:HG2_PB_SVrefine2PBcRplusDovetail_2594:HG3_Ill_150bpfermikitraw_17275:HG3_Ill_250bpfermikitraw_17767:HG3_Ill_SVrefine2DISCOVARDovetail_9892:HG3_PB_SVrefine2PBcRDovetail_6462:HG4_Ill_MetaSV_1216:HG4_Ill_SVrefine2DISCOVARDovetail_9752:HG4_PB_SVrefine2PBcRDovetail_6803;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.161017;PBcalls=15;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=115;DistBack=1565;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=12:128391066-128391066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1332.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:88:1/1:0:22:0:22:1/1:0:22:1:51:1/1:0:23:./.:.:.:.:.:.
chr12	128425046	HG4_Ill_250bpfermikitraw_18086	T	TTTAAAGACAACCTGACAAAAGGGGAGTAAGACTGCCAGTCACCTGGAGTTAGCCTCACCACTGCCCGAA	20	PASS	ClusterIDs=HG4_PB_HySA_19901:HG2_PB_HySA_24855:HG4_Ill_GATKHC_21847:HG4_Ill_GATKHCSBGrefine_9419:HG3_Ill_GATKHC_21747:HG3_Ill_GATKHCSBGrefine_9015:HG2_Ill_GATKHC_21865:HG2_Ill_GATKHCSBGrefine_9135:HG4_Ill_manta_3213:HG4_Ill_Cortex_850:HG3_Ill_manta_3100:HG3_Ill_Cortex_895:HG2_Ill_manta_3775:HG2_Ill_SpiralSDKrefine_3980:HG2_Ill_Cortex_2040:HG2_PB_pbsv_13631:HG3_PB_pbsv_13315:HG4_Ill_svaba_17083:HG4_Ill_Krunchall_18950:HG4_Ill_250bpfermikitraw_18086:HG4_Ill_150bpfermikitraw_17403:HG3_Ill_svaba_17179:HG3_Ill_Krunchall_18284:HG3_Ill_250bpfermikitraw_17768:HG3_Ill_150bpfermikitraw_17276:HG2_Ill_svaba_17046:HG2_Ill_Krunchall_18635:HG2_Ill_250bpfermikitraw_18298:HG2_Ill_150bpfermikitraw_17228:HG3_PB_HySA_20566:HG4_PB_pbsv_13631;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17228:HG2_Ill_250bpfermikitraw_18298:HG2_Ill_Krunchall_18635:HG2_Ill_svaba_17046:HG3_Ill_150bpfermikitraw_17276:HG3_Ill_250bpfermikitraw_17768:HG3_Ill_Krunchall_18284:HG3_Ill_svaba_17179:HG4_Ill_150bpfermikitraw_17403:HG4_Ill_250bpfermikitraw_18086:HG4_Ill_Krunchall_18950:HG4_Ill_svaba_17083;NumExactMatchSVs=12;ClusterMaxShiftDist=0.161074;ClusterMaxSizeDiff=0.157895;ClusterMaxEditDist=0.241611;PBcalls=6;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=-1;DistForward=6189;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=12:128425045-128425047;PctSeqSimilarity=0.9408;PctSizeSimilarity=0.92;PctRecOverlap=0.92;SizeDiff=-6;StartDistance=-3;EndDistance=-3;GTMatch=0;TruScore=92;MatchId=1333.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:20:./.:30:3:14:22:1|0:1:27:28:0:0/1:27:17:./.:.:.:.:.:.
chr12	128869779	HG2_Ill_250bpfermikitraw_18301	C	CGCCGAGTCCTCGCACAGAGCCTGATAGGATCATTGTAAAGATTTAAGACATAAAT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_18301:HG3_PB_HySA_20575:HG2_PB_HySA_24863:HG2_PB_pbsv_13635:HG3_Ill_GATKHC_21762:HG3_PB_pbsv_13320:HG3_Ill_GATKHCSBGrefine_9021:HG3_Ill_250bpfermikitraw_17773;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18301:HG3_Ill_GATKHC_21762:HG3_Ill_GATKHCSBGrefine_9021:HG3_Ill_250bpfermikitraw_17773;NumExactMatchSVs=4;ClusterMaxShiftDist=0.103448;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.307692;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=10243;DistForward=33;DistMin=33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=278;REFWIDENED=12:128869748-128870025;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1334.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:32:0|1:18:5:3:27:./.:5:0:2:7:0/1:13:21:./.:.:.:.:.:.
chr12	128967846	HG2_PB_SVrefine2Falcon2Bionano_6777	G	GGGGGAGGTGAGGGGAGTGGAGGAGGGGGGAGGGGAGGAGAGGGGAGGAGGGGGGAGGGGAGGAGGGGGAGGGCAAGGGGAGAGGAGGAGGGGAGGAGGGGGAGGGGGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2743:HG2_PB_HySA_24867:HG2_PB_PB10Xdip_6710:HG4_PB_pbsv_13639:HG3_PB_HySA_20579:HG3_PB_assemblyticsfalcon_6346:HG3_PB_SVrefine2Falcon1Dovetail_8259:HG4_PB_assemblyticsfalcon_6246:HG4_PB_SVrefine2Falcon1Dovetail_8316:HG3_PB_SVrefine2PBcRDovetail_6466:HG2_PB_pbsv_13638:HG3_Ill_SVrefine2DISCOVARDovetail_9895:HG2_PB_SVrefine2PBcRplusDovetail_2600:HG2_PB_SVrefine2PB10Xhap12_9838:HG2_PB_SVrefine2Falcon2Bionano_6777:HG2_10X_SVrefine210Xhap12_9550:HG4_PB_SVrefine2PBcRDovetail_6807:HG4_PB_HySA_19910;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9550:HG2_PB_SVrefine2Falcon2Bionano_6777:HG2_PB_SVrefine2PB10Xhap12_9838:HG2_PB_SVrefine2PBcRplusDovetail_2600:HG3_Ill_SVrefine2DISCOVARDovetail_9895:HG3_PB_SVrefine2PBcRDovetail_6466;NumExactMatchSVs=6;ClusterMaxShiftDist=0.151659;ClusterMaxSizeDiff=0.122066;ClusterMaxEditDist=0.258929;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=108;DistBack=-34;DistForward=7;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=34;REFWIDENED=12:128967847-128967880;PctSeqSimilarity=0.9915;PctSizeSimilarity=0.9908;PctRecOverlap=0.9266;SizeDiff=-1;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=96;MatchId=1335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:2:26:0:26:./.:1:8:1:5:./.:0:6:./.:.:.:.:1060:.
chr12	129519425	HG4_Ill_GATKHCSBGrefine_9437	T	TCCTCATCCCTAACTTCCAGCCCCTAGATCTCCCCCTAATTCCCCACCATGCCCCACACACGTG	20	PASS	ClusterIDs=HG4_PB_HySA_19925:HG4_Ill_svaba_17104:HG2_Ill_svaba_17071:HG4_PB_pbsv_13650:HG2_PB_HySA_24890:HG2_PB_pbsv_13650:HG4_Ill_Krunchall_18966:HG4_Ill_GATKHC_21874:HG4_Ill_GATKHCSBGrefine_9437:HG4_Ill_250bpfermikitraw_18101:HG4_Ill_150bpfermikitraw_17418:HG2_PB_SVrefine2PBcRplusDovetail_2605:HG2_Ill_SVrefine2DISCOVARplusDovetail_3098:HG2_Ill_Krunchall_18656:HG2_Ill_GATKHC_21896:HG2_Ill_GATKHCSBGrefine_9148:HG2_Ill_250bpfermikitraw_18316:HG2_Ill_150bpfermikitraw_17243;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17243:HG2_Ill_250bpfermikitraw_18316:HG2_Ill_GATKHCSBGrefine_9148:HG2_Ill_GATKHC_21896:HG2_Ill_Krunchall_18656:HG2_Ill_SVrefine2DISCOVARplusDovetail_3098:HG2_PB_SVrefine2PBcRplusDovetail_2605:HG4_Ill_150bpfermikitraw_17418:HG4_Ill_250bpfermikitraw_18101:HG4_Ill_GATKHCSBGrefine_9437:HG4_Ill_GATKHC_21874:HG4_Ill_Krunchall_18966;NumExactMatchSVs=12;ClusterMaxShiftDist=0.09375;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.230769;PBcalls=5;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=63;DistBack=2021;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=63;REFWIDENED=12:129519426-129519488;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1338.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:31:1|0:5:26:15:2:1|0:1:20:12:0:0/1:25:26:./.:.:.:.:.:.
chr12	129650847	HG3_Ill_GATKHC_21780	G	GCTCCATCTAAAGGGCCACGTATGTTTCGTCTCCGGCTACTGTTTGACATACATGAATGTGGGCGGAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17245:HG4_PB_assemblyticsfalcon_6263:HG3_PB_assemblyticsfalcon_6364:HG4_PB_HySA_19927:HG2_PB_HySA_24893:HG4_Ill_svaba_17106:HG2_PB_pbsv_13652:HG4_Ill_scalpel_12614:HG4_PB_pbsv_13651:HG4_Ill_manta_3215:HG4_Ill_Krunchall_18968:HG4_Ill_GATKHC_21877:HG4_Ill_GATKHCSBGrefine_9439:HG4_Ill_250bpfermikitraw_18103:HG4_Ill_150bpfermikitraw_17421:HG3_Ill_svaba_17207:HG3_Ill_Spiral_14262:HG3_Ill_GATKHC_21780:HG3_Ill_GATKHCSBGrefine_9028:HG3_Ill_250bpfermikitraw_17786:HG3_Ill_150bpfermikitraw_17298:HG2_Ill_svaba_17073:HG2_Ill_scalpel_12915:HG2_Ill_SpiralSDKrefine_3995:HG2_Ill_Krunchall_18658:HG2_Ill_GATKHC_21898:HG2_Ill_GATKHCSBGrefine_9149:HG2_Ill_250bpfermikitraw_18318;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17245:HG4_Ill_svaba_17106:HG4_Ill_scalpel_12614:HG4_Ill_manta_3215:HG4_Ill_Krunchall_18968:HG4_Ill_GATKHC_21877:HG4_Ill_GATKHCSBGrefine_9439:HG4_Ill_250bpfermikitraw_18103:HG4_Ill_150bpfermikitraw_17421:HG3_Ill_svaba_17207:HG3_Ill_Spiral_14262:HG3_Ill_GATKHC_21780:HG3_Ill_GATKHCSBGrefine_9028:HG3_Ill_250bpfermikitraw_17786:HG3_Ill_150bpfermikitraw_17298:HG2_Ill_svaba_17073:HG2_Ill_scalpel_12915:HG2_Ill_SpiralSDKrefine_3995:HG2_Ill_Krunchall_18658:HG2_Ill_GATKHC_21898:HG2_Ill_GATKHCSBGrefine_9149:HG2_Ill_250bpfermikitraw_18318;NumExactMatchSVs=22;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.347826;PBcalls=6;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=9503;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=133;REFWIDENED=12:129650848-129650980;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:16:0|1:25:5:3:10:1|0:1:21:17:0:0/1:26:15:./.:.:.:.:.:.
chr12	129787681	HG2_PB_SVrefine2PBcRplusDovetail_2606	C	CAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCAACATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAGAGCCTCCACCATCATCACTCGCCGGGACTCTGCAG	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_6721:HG3_PB_pbsv_13338:HG2_PB_pbsv_13655:HG4_PB_pbsv_13654:HG3_PB_SVrefine2Falcon1Dovetail_8269:HG2_PB_HySA_24898:HG3_PB_SVrefine2PBcRDovetail_6470:HG2_PB_SVrefine2PBcRplusDovetail_2606:HG2_PB_SVrefine2Falcon1plusDovetail_2750:HG2_PB_SVrefine2PB10Xhap12_9848:HG4_PB_SVrefine2Falcon1Dovetail_8325:HG4_PB_HySA_19930:HG2_PB_SVrefine2Falcon2Bionano_6784;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2750:HG2_PB_SVrefine2PBcRplusDovetail_2606:HG3_PB_SVrefine2Falcon1Dovetail_8269;NumExactMatchSVs=3;ClusterMaxShiftDist=0.240077;ClusterMaxSizeDiff=0.238141;ClusterMaxEditDist=0.280736;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=525;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=497;REFWIDENED=12:129787682-129788178;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1340.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:93:1/1:0:21:0:18:./.:1:0:1:0:./.:0:0:0/1:4:8:.:.:.
chr12	130455045	HG2_PB_SVrefine2Falcon1plusDovetail_2760	T	TAAAAAGGCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2760:HG4_PB_pbsv_13667:HG4_PB_HySA_19943:HG4_PB_assemblyticsfalcon_6283:HG3_PB_assemblyticsfalcon_6381:HG3_PB_pbsv_13354:HG3_PB_HySA_20626:HG4_PB_SVrefine2Falcon1Dovetail_8334:HG3_PB_SVrefine2Falcon1Dovetail_8276:HG3_Ill_MetaSV_1268:HG4_PB_SVrefine2PBcRDovetail_6821:HG3_PB_SVrefine2PBcRDovetail_6476;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2760:HG3_PB_SVrefine2PBcRDovetail_6476;NumExactMatchSVs=2;ClusterMaxShiftDist=0.11875;ClusterMaxSizeDiff=0.11875;ClusterMaxEditDist=0.237237;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=8389;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=12:130455046-130455055;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9875;PctRecOverlap=0.9875;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:38:./.:11:24:32:18:0|1:17:0:0:10:0/1:19:4:0/1:8:19:.:.:.
chr12	130539584	HG3_Ill_GATKHCSBGrefine_9038	C	CACAACCACACACAAAACCACACACAACCACACACACAAAACTACACACAACCACACACCTCCACAACCACACACAACCACACACAGCCACACACACAACCACAACCAAACACAACCACACACACATATAACCCCACACACAACCATCACAACCCCACACACACCACCACCACACACAAACGACTACACACACCACAACCACACACATATATACACACCACACAAAACCACAACCACATACCACCACAACCACACACGCAAACAACCATACAAAAGCACACACAACCACAACCACACACACCACCATACACACCACAACCACACACCTCTACAACCACACACACAACCGCACACACACATAGCCACACACACTGCCACACACAACCACACATACAACCACAACCACACCACCACACACACAACCACACACACACAAATCCCCACACACCACCACACACAACCGCACACACCACGCACAACCAGATACAACCACACACACACAAATTCCCACACACACAACCACACACACCATCACACACCACCACACACACCATACACAACCACATACATGCACACACAACCATACACAAATAAGCACACACCACAACCACAACCACACACCTCCACAACTACACACAGAACCGCACACACAGCCACGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2762:HG3_PB_assemblyticsfalcon_6386:HG4_PB_assemblyticsfalcon_6288:HG4_PB_SVrefine2Falcon1Dovetail_8337:HG3_PB_SVrefine2Falcon1Dovetail_8279:HG4_PB_pbsv_13668:HG4_PB_HySA_19947:HG2_PB_PB10Xdip_6737:HG4_Ill_GATKHCSBGrefine_9448:HG4_Ill_MetaSV_1226:HG2_Ill_GATKHCSBGrefine_9160:HG3_Ill_MetaSV_1269:HG3_Ill_GATKHCSBGrefine_9038:HG2_Ill_MetaSV_1153:HG4_PB_HySA_19946:HG3_PB_pbsv_13357:HG3_Ill_SVrefine2DISCOVARDovetail_9912:HG2_PB_pbsv_13671:HG2_PB_SVrefine2PB10Xhap12_9863:HG4_PB_SVrefine2Falcon1Dovetail_8336:HG2_Ill_SVrefine2DISCOVARplusDovetail_3106:HG3_PB_SVrefine2Falcon1Dovetail_8278:HG2_PB_SVrefine2Falcon2Bionano_6793:HG4_Ill_SVrefine2DISCOVARDovetail_9769:HG4_PB_SVrefine2PBcRDovetail_6822:HG2_PB_SVrefine2PBcRplusDovetail_2616;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_MetaSV_1153:HG3_Ill_GATKHCSBGrefine_9038:HG3_Ill_MetaSV_1269;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0965108;ClusterMaxSizeDiff=0.0876021;ClusterMaxEditDist=0.224286;PBcalls=17;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=658;DistBack=0;DistForward=10;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=774;REFWIDENED=12:130539312-130540085;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.985;PctRecOverlap=0.9851;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1342.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:2:19:2:20:./.:415:1515:320:1272:./.:0:3:1/1:2:139:.:.:.
chr12	130871435	HG4_PB_pbsv_13672	C	CCCATTTCACCCATGCAACACCACCCCCTTCCTGTCTCCACTTCACCCATGCACCCACCCCTTCCTGTCTCCATTCACCCACTGCACACTACCCCTTCCTGTTCTCCATTTCACCTTTATGGCACCACTACCCCCTTTCTGTCTACCATTCACCCCATGGGCACACTACCCCCCTTTCCTGCTCCATTCACCCATGCCACACCACCCCTTCCTGTCTCCATTTCACCCACTGCACACCACCCCTTCCTGTCTCCATTCACCCATGCAACACCAACCCCTCCTGTCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2765:HG3_PB_SVrefine2Falcon1Dovetail_8282:HG4_PB_SVrefine2Falcon1Dovetail_8341:HG4_PB_assemblyticsfalcon_6294:HG4_PB_SVrefine2Falcon1Dovetail_8340:HG4_PB_pbsv_13672:HG2_PB_SVrefine2Falcon2Bionano_6796:HG2_PB_SVrefine2PBcRplusDovetail_2620:HG3_PB_SVrefine2PBcRDovetail_6479;NumClusterSVs=9;ExactMatchIDs=HG4_PB_pbsv_13672;NumExactMatchSVs=1;ClusterMaxShiftDist=0.281426;ClusterMaxSizeDiff=0.281426;ClusterMaxEditDist=0.314563;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=285;DistBack=-349;DistForward=18;DistMin=-349;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=625;REFWIDENED=12:130870936-130871560;PctSeqSimilarity=0.9602;PctSizeSimilarity=0.9333;PctRecOverlap=0.5719;SizeDiff=19;StartDistance=113;EndDistance=113;GTMatch=0;TruScore=82;MatchId=1344.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:18:0|1:26:3:5:20:./.:3:0:8:0:./.:0:0:./.:.:.:.:4084:.
chr12	131126011	HG2_PB_SVrefine2Falcon1plusDovetail_2770	C	TGGGCTGGATTTAGGATGGTGACTGCCGGACACTCGGCCCGGCATCACGGGCTGGATTTAGGATGGTGACTGCCGGACACTCGGCCCGGCATCAT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_18348:HG3_PB_pbsv_13374:HG2_PB_SVrefine2Falcon2Bionano_6801:HG3_Ill_SVrefine2DISCOVARDovetail_9918:HG2_PB_SVrefine2Falcon1plusDovetail_2770:HG2_Ill_SVrefine2DISCOVARplusDovetail_3110:HG2_PB_pbsv_13682:HG3_Ill_250bpfermikitraw_17820;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3110:HG2_PB_SVrefine2Falcon1plusDovetail_2770:HG3_Ill_SVrefine2DISCOVARDovetail_9918;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0725389;ClusterMaxSizeDiff=0.0618557;ClusterMaxEditDist=0.361809;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=94;DistBack=-1;DistForward=4572;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=173;REFWIDENED=12:131125838-131126010;PctSeqSimilarity=0.9974;PctSizeSimilarity=1;PctRecOverlap=0.0105;SizeDiff=0;StartDistance=94;EndDistance=94;GTMatch=0;TruScore=66;MatchId=1345.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:18:1|0:0:21:29:2:./.:2:0:2:1:0/1:16:9:./.:.:.:.:11506:.
chr12	131144866	HG4_Ill_MetaSV_1228	G	GCAGGTGCTGACATAAAACATCGGGGAGACCTCCAGGAAGCAAGAACACCGCCCATAGCTCTTGGGTTTGGTAAGTGGAATGTAAATATGCCGGAAGGCTGGGCTCAGTGGCTCATGCCTTTAATCCCAACACTTTGGGAGGCCAAGGCCAGTGGATCACTGGAGGCCAGGAGTTTGAGACTAGCCTGGGCAACATGGTGAAACCCCATCTCTACAAAAAATACAAAAATTAGCTAGGCGGTCCATGCCTGTAGTCCCAGCTACTCAGGGGGCACAGGTGGGAGGATCACCTGAGCCTGGGAGGCAGAGGTTGCAGTGATACTCAGGGGACTCAGGTGGGAGGATCACCTGAACCTGGGAGGCAGAGGTCGCAGTGAGCCACGATCACGTCGCTGCACTCCAGCCTGGGCAACAGGGCGACCTTGTCTCAAAAAAATAAAATGAATAAATAAACAAGCCCAAAGATTTTGC	20	PASS	ClusterIDs=HG2_PB_pbsv_13683:HG4_Ill_Spiral_1082:HG4_PB_pbsv_13683:HG3_Ill_Spiral_14296:HG2_Ill_Spiral_923:HG3_PB_pbsv_13376:HG4_PB_assemblyticsfalcon_6309:HG3_PB_assemblyticsfalcon_6412:HG4_PB_SVrefine2PBcRDovetail_6830:HG2_PB_SVrefine2PBcRplusDovetail_2625:HG4_Ill_SVrefine2DISCOVARDovetail_9773:HG4_Ill_MetaSV_1228:HG4_Ill_GATKHCSBGrefine_9457:HG3_PB_SVrefine2PBcRDovetail_6484:HG3_Ill_MetaSV_1272:HG3_Ill_GATKHCSBGrefine_9048:HG2_PB_SVrefine2Falcon2Bionano_6802:HG2_PB_SVrefine2Falcon1plusDovetail_2772:HG2_Ill_SVrefine2DISCOVARplusDovetail_3111:HG2_Ill_MetaSV_1154:HG2_Ill_GATKHCSBGrefine_9166:HG2_10X_SVrefine210Xhap12_9580:HG4_PB_SVrefine2Falcon1Dovetail_8349:HG2_Ill_manta_3782:HG3_PB_SVrefine2Falcon1Dovetail_8291:HG4_PB_HySA_19967:HG3_PB_HySA_20655;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9166:HG2_Ill_MetaSV_1154:HG2_Ill_SVrefine2DISCOVARplusDovetail_3111:HG2_PB_SVrefine2Falcon1plusDovetail_2772:HG2_PB_SVrefine2Falcon2Bionano_6802:HG3_Ill_GATKHCSBGrefine_9048:HG3_Ill_MetaSV_1272:HG3_PB_SVrefine2PBcRDovetail_6484:HG4_Ill_GATKHCSBGrefine_9457:HG4_Ill_MetaSV_1228:HG4_Ill_SVrefine2DISCOVARDovetail_9773;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0672976;ClusterMaxSizeDiff=0.0609884;ClusterMaxEditDist=0.202454;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=470;DistBack=1385;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=12:131144867-131144870;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:23:0|1:30:2:0:22:0|1:13:0:0:10:0/1:20:10:0/1:10:37:.:11506:.
chr12	131197843	HG4_Ill_SVrefine2DISCOVARDovetail_9774	A	ACCTTTGCACACAAGGGTGGTGGCACCAGCATCACCAACAAGAGATGCAGGTGTCCTCAGCTGGTTGC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_18351:HG4_PB_pbsv_13686:HG4_PB_HySA_19970:HG2_PB_pbsv_13685:HG2_PB_HySA_24954:HG4_Ill_SVrefine2DISCOVARDovetail_9774:HG4_Ill_250bpfermikitraw_18133:HG2_Ill_SVrefine2DISCOVARplusDovetail_3113;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18351:HG4_Ill_SVrefine2DISCOVARDovetail_9774:HG4_Ill_250bpfermikitraw_18133:HG2_Ill_SVrefine2DISCOVARplusDovetail_3113;NumExactMatchSVs=4;ClusterMaxShiftDist=0.057554;ClusterMaxSizeDiff=0.0431655;ClusterMaxEditDist=0.326241;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=37742;DistForward=43904;DistMin=37742;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=134;REFWIDENED=12:131197844-131197977;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1347.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:1|0:3:24:20:3:./.:5:7:11:0:0/1:23:21:./.:.:.:.:.:.
chr12	131514402	HG2_PB_SVrefine2PB10Xhap12_9884	T	TCGGTGACATTCCCAGGCTCTGGGGTTAGGTTGTGGACCCCTCGTTCGGTGACATTCCCAGGCTCTGGGGTTAGGTTGTGGACCCCTCTTAA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_6785:HG2_PB_SVrefine2Falcon2Bionano_6809:HG4_PB_pbsv_13696:HG3_PB_HySA_20674:HG3_PB_pbsv_13395:HG3_PB_SVrefine2PBcRDovetail_6489:HG2_PB_pbsv_13697:HG2_PB_SVrefine2PBcRplusDovetail_2630:HG2_PB_SVrefine2PB10Xhap12_9884:HG2_PB_SVrefine2Falcon1plusDovetail_2782:HG2_PB_HySA_24970;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2782:HG2_PB_SVrefine2PB10Xhap12_9884:HG2_PB_SVrefine2PBcRplusDovetail_2630:HG3_PB_SVrefine2PBcRDovetail_6489;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0543478;ClusterMaxSizeDiff=0.0217391;ClusterMaxEditDist=0.281081;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=91;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=844;REFWIDENED=12:131514000-131514843;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:69:1/1:1:32:6:33:./.:1:3:2:5:./.:0:1:./.:.:.:.:.:.
chr12	131530398	HG2_PB_SVrefine2PB10Xhap12_9887	T	TCCTGGTCAGTGCTCCCTGCCTTGTCCATATCCTTCCTGGTCAGTGCTCCCTGCCTTGTCCATATCCTTCCTGGTGGTGCTCCCGCCCTGGTTGGTGCTCCCTCCCTGGTCAGTGTCCTCCCTGGGGAGTGCTCCCTCCTTGCTCAGTGTCCTCCCTGGTGAGTGTCCTCCCTGGTCAGTGTCCTCCCTGGTCAGCACTTCTCCCAGGTCAGTGTCCTTCCCGGTCAGCGTCCTCCCTGGTCAATGCTCCCTCCCAGGTCAGTGTCCTCCCTGGTCAGTGCTCCCTCTCTGCTCGGTGTCCTCCCTGGTCAGTGTCCTTCCTGGTCAATGCTCCCTCCCTGGTCAGTGTCCTCCCTGGTCAGTGTCCTCCCTGGTCAATGCTCCTCCCTGGTCAGTGTCCTCCTGGTCAGTACTCCCTCCCTGGTCAATGCTCCCTC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8358:HG2_PB_HySA_24973:HG3_PB_pbsv_13396:HG2_PB_pbsv_13700:HG3_PB_HySA_20675:HG4_PB_pbsv_13699:HG2_PB_SVrefine2Falcon1plusDovetail_2783:HG2_PB_SVrefine2PBcRplusDovetail_2631:HG2_PB_SVrefine2PB10Xhap12_9887:HG2_PB_SVrefine2PB10Xhap12_9886:HG2_PB_SVrefine2Falcon2Bionano_6810:HG3_PB_SVrefine2PBcRDovetail_6490:HG3_PB_SVrefine2Falcon1Dovetail_8300:HG2_PB_PB10Xdip_6788;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9887:HG2_PB_SVrefine2PBcRplusDovetail_2631;NumExactMatchSVs=2;ClusterMaxShiftDist=0.296837;ClusterMaxSizeDiff=0.296837;ClusterMaxEditDist=0.313869;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=436;DistBack=-1309;DistForward=29;DistMin=-1309;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=497;REFWIDENED=12:131530399-131530895;PctSeqSimilarity=0.9555;PctSizeSimilarity=0.9633;PctRecOverlap=0.1625;SizeDiff=16;StartDistance=-358;EndDistance=-358;GTMatch=1;TruScore=69;MatchId=1350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:71:1/1:6:35:4:21:./.:3:2:3:4:./.:0:3:./.:1:18:.:.:.
chr12	131591847	HG2_Ill_GATKHC_21961	C	CGAAGGGCTCTGATGGGTCCCGCTCTCCCAGAGACCTGTGTCTGAATCCCAGG	20	PASS	ClusterIDs=HG3_PB_pbsv_13400:HG3_PB_HySA_20679:HG4_PB_HySA_19983:HG4_PB_pbsv_13702:HG4_PB_assemblyticsfalcon_6337:HG2_PB_pbsv_13706:HG4_Ill_GATKHC_21938:HG4_Ill_GATKHCSBGrefine_9467:HG3_Ill_GATKHC_21849:HG2_Ill_GATKHC_21961:HG2_Ill_GATKHCSBGrefine_9177:HG2_Ill_150bpfermikitraw_17291;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17291:HG2_Ill_GATKHCSBGrefine_9177:HG2_Ill_GATKHC_21961:HG3_Ill_GATKHC_21849:HG4_Ill_GATKHCSBGrefine_9467:HG4_Ill_GATKHC_21938:HG4_PB_assemblyticsfalcon_6337;NumExactMatchSVs=7;ClusterMaxShiftDist=0.145455;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.265487;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=-79;DistForward=249;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=451;REFWIDENED=12:131591666-131592116;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1351.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:10:./.:11:4:3:5:./.:2:0:7:0:./.:19:1:./.:.:.:.:.:.
chr12	131613988	HG2_PB_HySA_24980	T	TGTGAAGTGACAGGCCCGCCCTGCTGTCTGGGTGTGAGTGACAGCCCCCCCTCCTGTCTGGGTGTGAGTGACAGGCCGGCCCTGCTGTCTGGGTGTGAGTGACAGGCCCGCCCTGCTGTCTGGGTGTGAGTAACAGCCCCGCCCTGCTCTCTGGGTGTGAATGACAGCCCCGCCCTGCTCTGGGTGTGA	10	PASS	ClusterIDs=HG2_PB_HySA_24980:HG2_PB_pbsv_13708:HG3_PB_pbsv_13403:HG2_PB_SVrefine2PB10Xhap12_9893:HG2_PB_SVrefine2PBcRplusDovetail_2635:HG2_PB_SVrefine2Falcon1plusDovetail_2787:HG3_PB_HySA_20682;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_24980;NumExactMatchSVs=1;ClusterMaxShiftDist=0.193732;ClusterMaxSizeDiff=0.188034;ClusterMaxEditDist=0.338109;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=188;DistBack=3;DistForward=32;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=699;REFWIDENED=12:131613382-131614080;PctSeqSimilarity=0.9799;PctSizeSimilarity=0.9787;PctRecOverlap=0.9259;SizeDiff=4;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=96;MatchId=1352.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:36:0|1:18:2:2:31:0|1:11:0:0:19:0/1:5:8:./.:.:.:.:.:.
chr12	131797376	HG2_Ill_svaba_17137	T	TCATCATCCTGCCCACTGTGCAGCTGGAAAACCCAAGGCTCAGAGGTGCTTTCATG	20	PASS	ClusterIDs=HG2_PB_HySA_24984:HG4_PB_HySA_19991:HG2_PB_pbsv_13713:HG3_PB_pbsv_13407:HG3_PB_HySA_20689:HG4_PB_assemblyticsfalcon_6346:HG4_Ill_svaba_17161:HG4_Ill_Krunchall_19024:HG4_Ill_GATKHC_21951:HG4_Ill_GATKHCSBGrefine_9470:HG4_Ill_250bpfermikitraw_18152:HG4_Ill_150bpfermikitraw_17474:HG3_Ill_svaba_17271:HG3_Ill_scalpel_13197:HG3_Ill_manta_3108:HG3_Ill_Spiral_14308:HG3_Ill_Krunchall_18353:HG3_Ill_GATKHC_21859:HG3_Ill_GATKHCSBGrefine_9066:HG3_Ill_250bpfermikitraw_17845:HG2_Ill_svaba_17137:HG2_Ill_SpiralSDKrefine_4034:HG2_Ill_Krunchall_18711:HG2_Ill_GATKHC_21971:HG2_Ill_GATKHCSBGrefine_9179:HG2_Ill_250bpfermikitraw_18373;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18373:HG2_Ill_GATKHCSBGrefine_9179:HG2_Ill_GATKHC_21971:HG2_Ill_Krunchall_18711:HG2_Ill_SpiralSDKrefine_4034:HG2_Ill_svaba_17137:HG3_Ill_250bpfermikitraw_17845:HG3_Ill_GATKHCSBGrefine_9066:HG3_Ill_GATKHC_21859:HG3_Ill_Krunchall_18353:HG3_Ill_Spiral_14308:HG3_Ill_manta_3108:HG3_Ill_scalpel_13197:HG3_Ill_svaba_17271:HG4_Ill_150bpfermikitraw_17474:HG4_Ill_250bpfermikitraw_18152:HG4_Ill_GATKHCSBGrefine_9470:HG4_Ill_GATKHC_21951:HG4_Ill_Krunchall_19024:HG4_Ill_svaba_17161:HG4_PB_assemblyticsfalcon_6346;NumExactMatchSVs=21;ClusterMaxShiftDist=0.106195;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.178571;PBcalls=6;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=55;DistBack=5683;DistForward=55;DistMin=55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=57;REFWIDENED=12:131797377-131797433;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1353.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:31:./.:28:10:10:27:0|1:9:0:1:17:0/1:30:17:./.:.:.:.:.:.
chr12	131803071	HG2_Ill_250bpfermikitraw_18374	T	TTGAATGAATGAATGAATGAGTGAGTGAATGAATGAATGAATGAATGAGTGAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4444:HG3_PB_pbsv_13408:HG2_PB_pbsv_13714:HG2_PB_HySA_24985:HG3_PB_HySA_20690:HG3_Ill_svaba_17272:HG3_Ill_scalpel_13198:HG3_Ill_Spiral_14309:HG3_Ill_Krunchall_18354:HG3_Ill_GATKHC_21860:HG3_Ill_GATKHCSBGrefine_9067:HG3_Ill_250bpfermikitraw_17846:HG3_Ill_150bpfermikitraw_17353:HG2_Ill_svaba_17138:HG2_Ill_Krunchall_18712:HG2_Ill_GATKHC_21972:HG2_Ill_GATKHCSBGrefine_9180:HG2_Ill_FB_11822:HG2_Ill_250bpfermikitraw_18374:HG2_Ill_150bpfermikitraw_17298;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17298:HG2_Ill_250bpfermikitraw_18374:HG2_Ill_FB_11822:HG2_Ill_GATKHCSBGrefine_9180:HG2_Ill_GATKHC_21972:HG2_Ill_Krunchall_18712:HG2_Ill_svaba_17138:HG3_Ill_150bpfermikitraw_17353:HG3_Ill_250bpfermikitraw_17846:HG3_Ill_GATKHCSBGrefine_9067:HG3_Ill_GATKHC_21860:HG3_Ill_Krunchall_18354:HG3_Ill_Spiral_14309:HG3_Ill_scalpel_13198:HG3_Ill_svaba_17272;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0747664;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.146789;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=-1;DistForward=76;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=15;REFWIDENED=12:131803070-131803087;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1354.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:32:0|1:25:6:6:32:0|1:24:0:1:35:0/1:19:35:./.:.:.:.:.:.
chr12	132006821	HG3_Ill_svaba_17280	A	ATACTTCTCAGAGAAATTATGCAAATTATGCGAGCTTTTTTTCATATGTTTGTTGGCCACATGTATATTTCCTACGGAAAAACAAGGATAAAAGTTATACAG	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_9183:HG3_PB_SVrefine2PBcRDovetail_6503:HG2_PB_SVrefine2PB10Xhap12_9903:HG2_PB_SVrefine2Falcon2Bionano_6819:HG2_Ill_SVrefine2DISCOVARplusDovetail_3126:HG2_10X_SVrefine210Xhap12_9595:HG2_PB_PB10Xdip_6824:HG2_PB_pbsv_13725:HG3_PB_HySA_20707:HG3_PB_pbsv_13418:HG2_PB_HySA_24997:HG3_Ill_svaba_17280:HG3_Ill_GATKHCSBGrefine_9072:HG2_Ill_svaba_17146:HG2_Ill_GATKHC_21982;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9183:HG3_Ill_svaba_17280:HG3_Ill_GATKHCSBGrefine_9072:HG2_Ill_svaba_17146:HG2_Ill_GATKHC_21982;NumExactMatchSVs=5;ClusterMaxShiftDist=0.157635;ClusterMaxSizeDiff=0.147783;ClusterMaxEditDist=0.26;PBcalls=8;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=101;DistBack=44566;DistForward=17092;DistMin=17092;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=172;REFWIDENED=12:132006799-132006970;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:38:0|1:27:1:1:35:0|1:14:0:0:27:0/1:31:28:./.:.:.:.:.:.
chr12	132072801	HG2_PB_SVrefine2PBcRplusDovetail_2647	G	GTGGAGTGGAGTGGAGTGGGGTGGGGTGGGGTGGGGTGGAATGGAATGGAATGGAATGGAATAGAGTAGGGTGGGGTGGAGTGGGGTGGGGTGGGGTGGGGTGGGGTAGGGTGGAGTAGGGTGGGGTGGGGTGGAGTGGAGTGGAGTGGAATTGAATGGAATGGAATAGAGTAGGGTGGGTGGGGTGGGGTGGGGTGGGGTGTGGTGGGGTGGAATGGAATGGAATGGAATAGAGTGGGGTGGGGTGGGGTGGAGTGGAGTGGAGTGGAATGGAATGGAATAGAGTAGGGTGGGGTGGAGTGGGGTGGGGTGGGGTGGAATGGAATGGAATGGAATGGAATGGAATAGAGTGGGGTGGGGTGGGGTGGAGTGGAGTGGAGTGGAATGGAATGGAATAGAGTAGGGTGGGGTGGAGTGGGGTGGGGTGGGGTGGAATGGAATGGAATAGAGTGGGGTGGGGTGGAGTGGAATGGAATGGAATGGAATGGAATGGAATGGAATAGAGTGGGGTGGGGTGGAGTGGAGTGGAGTGGAATGGAATGGAATGGAATGGAATAGAGTGGGGTGGGGTGGAGTGGAATGGAATGGAATGGAATGGAATGGAATAGAGTGGGGTGGGGTGGAGTGGAGTGGAGTGGAATGGAATGGAATGGAATGGAATAGAGTGGGGTGGGGTGGAGTGGAATGGAATGGAATGGAATGGAATGGAATGGAATAGAGTGGGGTGGGGTGGAGTGGAGTGGAGTGGAATGGAATGGAATGGAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6841:HG2_PB_SVrefine2PBcRplusDovetail_2647:HG2_PB_SVrefine2PB10Xhap12_9908:HG2_PB_SVrefine2PB10Xhap12_9907:HG3_PB_SVrefine2Falcon1Dovetail_8312:HG2_PB_SVrefine2Falcon2Bionano_6821;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_2647;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0834455;ClusterMaxSizeDiff=0.0834455;ClusterMaxEditDist=0.132701;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=764;DistBack=3028;DistForward=21;DistMin=21;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=88;REFWIDENED=12:132072802-132072889;PctSeqSimilarity=0.9854;PctSizeSimilarity=0.9871;PctRecOverlap=0.8839;SizeDiff=-10;StartDistance=-85;EndDistance=-85;GTMatch=1;TruScore=95;MatchId=1356.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:0:16:0:27:1/1:1:9:0:5:./.:1:0:0/1:6:26:.:25096:.
chr12	132101441	HG4_Ill_GATKHC_21956	T	TCCCACCCTGTCCACCTCCCAGCCAGGAGTCATGTGGCCCCGTCCCGCTCCTCGAA	20	PASS	ClusterIDs=HG2_Ill_svaba_17152:HG3_PB_pbsv_13424:HG3_PB_HySA_20714:HG4_PB_pbsv_13720:HG2_PB_HySA_25003:HG2_PB_pbsv_13733:HG4_PB_HySA_20000:HG4_Ill_Krunchall_19028:HG4_Ill_GATKHC_21956:HG4_Ill_GATKHCSBGrefine_9472:HG4_Ill_250bpfermikitraw_18155:HG3_Ill_Spiral_14317:HG3_Ill_150bpfermikitraw_17363:HG2_Ill_manta_3790:HG2_Ill_SpiralSDKrefine_4042:HG2_Ill_Krunchall_18721:HG2_Ill_GATKHC_21989:HG2_Ill_GATKHCSBGrefine_9187:HG2_Ill_250bpfermikitraw_18382:HG2_Ill_150bpfermikitraw_17306:HG4_Ill_svaba_17168:HG3_Ill_svaba_17285:HG3_Ill_Krunchall_18363:HG3_Ill_GATKHC_21874:HG3_Ill_GATKHCSBGrefine_9079:HG3_Ill_250bpfermikitraw_17856;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17306:HG2_Ill_250bpfermikitraw_18382:HG2_Ill_GATKHCSBGrefine_9187:HG2_Ill_GATKHC_21989:HG2_Ill_Krunchall_18721:HG2_Ill_SpiralSDKrefine_4042:HG2_Ill_manta_3790:HG3_Ill_150bpfermikitraw_17363:HG3_Ill_Spiral_14317:HG4_Ill_250bpfermikitraw_18155:HG4_Ill_GATKHCSBGrefine_9472:HG4_Ill_GATKHC_21956:HG4_Ill_Krunchall_19028;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0877193;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.280702;PBcalls=6;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=17029;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=118;REFWIDENED=12:132101400-132101517;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1357.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:33:1|0:5:29:26:3:0|1:5:0:1:10:0/1:21:20:./.:.:.:.:1916:.
chr12	132355878	HG2_PB_SVrefine2PB10Xhap12_9918	T	TGGCCGGGTGTGCTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTAACACGGTGAAACCCCGTGTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCCGAGGCAGGAGAAGGGCGTGAACGCAGGAGGCGGAGCTTGCAGTGAGCCAGATCGCACCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAACTTAACAATGTATATTGAAGTTCTTTCCAGATCTGCATATAGACAGTTATCTCCCTTTTTTTTTTTTTTCTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTTACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCGGCTTCCCGAGTAGCTGTGACTACAGGCGCCTGCCACCAGGCCCGGCTAATTTTTTGTGTTTTTTAGTAGAGACAGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGCGATCCGCCCACCTCGGCCTCCCAAAGCATTGGAATTACAGACATGAGCCAGCGCGTCCGGCCGTTATCTCCTTTTTAATAGCTGTGTAGTACTCCATGAATGGGTACGTCGTAATTTATTTAGTCAGTTTCCCCAAATGAATTTTTATTAAGCTGTTGCCAGTCTTCTGTTACAACAAAAAATCCTGTATCAAAAAACTAAACA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8319:HG2_PB_pbsv_13742:HG4_PB_pbsv_13728:HG3_PB_pbsv_13434:HG2_PB_PB10Xdip_6870:HG4_Ill_GATKHCSBGrefine_9475:HG4_Ill_MetaSV_1238:HG3_PB_HySA_20729:HG4_PB_HySA_20021:HG2_PB_SVrefine2Falcon1plusDovetail_2793:HG3_PB_SVrefine2PBcRDovetail_6506:HG2_PB_SVrefine2PBcRplusDovetail_2653:HG2_PB_SVrefine2PB10Xhap12_9918:HG2_PB_SVrefine2Falcon2Bionano_6829:HG3_Ill_SVrefine2DISCOVARDovetail_9937:HG4_PB_SVrefine2PBcRDovetail_6847;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6829:HG2_PB_SVrefine2PB10Xhap12_9918:HG2_PB_SVrefine2PBcRplusDovetail_2653;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0650706;ClusterMaxSizeDiff=0.0601596;ClusterMaxEditDist=0.161252;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=795;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=12:132355879-132356176;PctSeqSimilarity=0.9862;PctSizeSimilarity=0.9975;PctRecOverlap=0.729;SizeDiff=-2;StartDistance=-215;EndDistance=-215;GTMatch=0;TruScore=90;MatchId=1359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:0:56:0:16:./.:0:7:0:0:./.:0:8:1/1:5:94:.:.:.
chr12	132403270	HG2_PB_SVrefine2PB10Xhap12_9920	T	TGTGTGGGGTGTGTGGGGTGTCGGGTGTGTGGGGTATAGGGTGTGTGGGGTGTAGGGTGTGTGGGGTGTCGGGTGTGGGGTGTCGGGGGTGTGGGGTGTAGAGTGTGGGGTGTAGTGTGTGGGGTGTCAGGTGTGTGGGGTGTCGGGTGTGGGGTGTAGGGTATGGGGTGTCGGGTGTGTGGGGTGTCGGGTGTGTGGGGTATAGGGTGTGTGGGGTATAGGGTGTGTGGGGTGTCGGGTGTGGGGTGTCGGGGGTGTGGGGTGTAGAGTGTGGGGTGTAGTGTGTGGGGTGTCAGGTGTGTGGGGTGTCGGGTGTGGGGTGTAGGGTGTGTGGGGTATAGGGTGTGTGGGGTGTCGGGTGTGGGGTGTCGGGGGTGTGGGGTGTAGAGTGTGGGGTGTAGTGTGGGGTGTCAGGTGTGTGGGGTGTCGGGTGTGGGGTGTCAGGTGTGTGGGGTGTAGGGTGTGGGGTGTAGGGTGTGTGGTGTAGGGTATGGG	10	PASS	ClusterIDs=HG3_PB_pbsv_13436:HG2_PB_HySA_25024:HG4_PB_SVrefine2Falcon1Dovetail_8376:HG3_PB_pbsv_13437:HG2_PB_pbsv_13745:HG2_PB_PB10Xdip_6877:HG4_PB_pbsv_13731:HG4_PB_SVrefine2Falcon1Dovetail_8375:HG3_PB_HySA_20734:HG2_PB_pbsv_13744:HG2_PB_SVrefine2Falcon1plusDovetail_2795:HG2_PB_SVrefine2Falcon2Bionano_6831:HG3_PB_SVrefine2PBcRDovetail_6508:HG2_PB_SVrefine2PBcRplusDovetail_2655:HG2_PB_SVrefine2PB10Xhap12_9920:HG3_PB_SVrefine2Falcon1Dovetail_8321:HG4_PB_pbsv_13732;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9920:HG2_PB_SVrefine2PBcRplusDovetail_2655:HG3_PB_SVrefine2PBcRDovetail_6508;NumExactMatchSVs=3;ClusterMaxShiftDist=0.203285;ClusterMaxSizeDiff=0.197125;ClusterMaxEditDist=0.394251;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=494;DistBack=1355;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=347;REFWIDENED=12:132403271-132403617;PctSeqSimilarity=0.999;PctSizeSimilarity=1;PctRecOverlap=0.9899;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=1360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:30:1/1:0:5:0:10:1/1:3:482:3:307:1/1:0:10:1/1:1:51:.:1779:.
chr12	132483181	HG2_PB_SVrefine2Falcon2Bionano_6833	T	TCTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGACTTTGTATACAGTCTTGTATACAAAGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6849:HG3_PB_pbsv_13440:HG2_PB_SVrefine2PBcRplusDovetail_2656:HG4_PB_pbsv_13734:HG3_PB_SVrefine2Falcon1Dovetail_8322:HG2_PB_pbsv_13748:HG2_PB_SVrefine2Falcon1plusDovetail_2796:HG3_PB_pbsv_13439:HG2_PB_pbsv_13747:HG4_PB_SVrefine2Falcon1Dovetail_8377:HG3_PB_SVrefine2PBcRDovetail_6509:HG2_PB_SVrefine2Falcon2Bionano_6833;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6833:HG3_PB_SVrefine2PBcRDovetail_6509:HG4_PB_SVrefine2Falcon1Dovetail_8377;NumExactMatchSVs=3;ClusterMaxShiftDist=0.297705;ClusterMaxSizeDiff=0.297705;ClusterMaxEditDist=0.299401;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=648;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=307;REFWIDENED=12:132483182-132483488;PctSeqSimilarity=0.8729;PctSizeSimilarity=0.7742;PctRecOverlap=0.7754;SizeDiff=-189;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=80;MatchId=1361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:72:1/1:0:13:0:19:./.:0:0:0:0:./.:0:1:0/1:2:14:.:913:.
chr12	132646292	HG2_PB_assemblyticsfalcon_6483	C	CCTCACTCAGCTCCTCCTCTCTCAGTTCCTCCTCTCTCAGCTCCTCCCCACTCAGCTCCTA	20	PASS	ClusterIDs=HG3_PB_pbsv_13446:HG2_PB_PB10Xdip_6885:HG4_PB_pbsv_13742:HG2_PB_pbsv_13754:HG3_PB_HySA_20739:HG2_PB_HySA_25035:HG4_PB_HySA_20034:HG3_PB_HySA_20738:HG4_Ill_GATKHCSBGrefine_9481:HG3_PB_assemblyticsfalcon_6477:HG3_Ill_Spiral_14323:HG3_Ill_GATKHC_21885:HG2_PB_assemblyticsfalcon_6483:HG2_Ill_GATKHC_22004:HG2_Ill_150bpfermikitraw_17315:HG4_Ill_GATKHC_21978;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17315:HG2_Ill_GATKHC_22004:HG2_PB_assemblyticsfalcon_6483:HG3_Ill_GATKHC_21885:HG3_Ill_Spiral_14323:HG3_PB_assemblyticsfalcon_6477:HG4_Ill_GATKHCSBGrefine_9481;NumExactMatchSVs=7;ClusterMaxShiftDist=0.140625;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.246154;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=60;DistBack=264;DistForward=129;DistMin=129;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=12:132646291-132646296;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:43:1/1:3:34:3:11:./.:1:1:3:4:./.:1:1:./.:.:.:.:.:.
chr12	132666652	HG2_PB_SVrefine2PB10Xhap12_9925	G	GTGTGTGATGTGTTTCATGGGTGGTGTATTGTGTATGTGTGTGTTGTGTGGTTGAATGTGTGGTGTGTGTATTGTGTGTGTGTCGTGTGGGTGTCATGTGGTTGAATGTGGTGTGGCACATGTGTTGCATACGTGTGTGTTGTGTGGTTCAGTGTGTGGTGTGTGTTTGGATGATGGTGTGTGTATTGTGTGTGCATGGCGTGTGTTGCATGTGTGCGTGTGGTGCGTGTTTGGATGATGGTGTGTGTATTGCATGTGTATCACATTTGTGTGTGTGTTGTATGATGGTGTGTATTGTTTATCATGTGTATTGTGTGTCGTGTGTGTCATGTGTGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9606:HG3_PB_pbsv_13449:HG2_PB_pbsv_13757:HG4_Ill_GATKHCSBGrefine_9483:HG2_PB_HySA_25038:HG3_Ill_SVrefine2DISCOVARDovetail_9942:HG4_Ill_GATKHCSBGrefine_9482:HG3_Ill_MetaSV_1285:HG3_Ill_GATKHCSBGrefine_9087:HG2_Ill_MetaSV_1165:HG2_Ill_GATKHCSBGrefine_9193:HG4_PB_pbsv_13746:HG4_Ill_MetaSV_1240:HG4_PB_HySA_20039:HG2_PB_PB10Xdip_6887:HG2_Ill_breakscan11_4448:HG4_PB_SVrefine2Falcon1Dovetail_8383:HG3_PB_SVrefine2Falcon1Dovetail_8328:HG4_PB_SVrefine2PBcRDovetail_6856:HG4_Ill_SVrefine2DISCOVARDovetail_9792:HG3_PB_SVrefine2PBcRDovetail_6512:HG2_PB_SVrefine2PBcRplusDovetail_2661:HG2_PB_SVrefine2PB10Xhap12_9925:HG2_PB_SVrefine2Falcon2Bionano_6838:HG2_PB_SVrefine2Falcon1plusDovetail_2802:HG2_Ill_SVrefine2DISCOVARplusDovetail_3136;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9606:HG4_Ill_SVrefine2DISCOVARDovetail_9792:HG3_PB_SVrefine2PBcRDovetail_6512:HG2_PB_SVrefine2PBcRplusDovetail_2661:HG2_PB_SVrefine2PB10Xhap12_9925:HG2_PB_SVrefine2Falcon2Bionano_6838:HG2_PB_SVrefine2Falcon1plusDovetail_2802:HG2_Ill_SVrefine2DISCOVARplusDovetail_3136;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0963173;ClusterMaxSizeDiff=0.0963173;ClusterMaxEditDist=0.189802;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=335;DistBack=4371;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=70;REFWIDENED=12:132666653-132666722;PctSeqSimilarity=0.9854;PctSizeSimilarity=0.9853;PctRecOverlap=0.8827;SizeDiff=-5;StartDistance=-37;EndDistance=-37;GTMatch=0;TruScore=95;MatchId=1363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:1:26:0:33:1/1:0:7:0:9:1/1:0:10:1/1:1:56:.:.:.
chr12	132871216	HG2_Ill_SpiralSDKrefine_4054	A	AGAGGGCAGGGCAGGAGCAAGGAGAGGCTGGGGGTCAGGACTTCCAGCCGG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17323:HG4_PB_pbsv_13750:HG3_PB_pbsv_13459:HG2_PB_PB10Xdip_6888:HG3_PB_HySA_20746:HG2_Ill_breakscan11_4450:HG2_PB_HySA_25048:HG4_PB_SVrefine2PBcRDovetail_6861:HG4_Ill_Krunchall_19037:HG4_Ill_GATKHC_21984:HG4_Ill_250bpfermikitraw_18168:HG4_Ill_150bpfermikitraw_17489:HG3_Ill_Krunchall_18377:HG3_Ill_GATKHC_21897:HG3_Ill_GATKHCSBGrefine_9093:HG3_Ill_250bpfermikitraw_17873:HG2_PB_SVrefine2PBcRplusDovetail_2666:HG2_PB_SVrefine2PB10Xhap12_9928:HG2_PB_SVrefine2Falcon2Bionano_6841:HG2_PB_SVrefine2Falcon1plusDovetail_2804:HG2_Ill_scalpel_12986:HG2_Ill_SpiralSDKrefine_4054:HG2_Ill_SVrefine2DISCOVARplusDovetail_3138:HG2_Ill_Krunchall_18737:HG2_Ill_GATKHC_22016:HG2_Ill_GATKHCSBGrefine_9198:HG2_Ill_FB_11826:HG2_Ill_250bpfermikitraw_18399;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17323:HG4_PB_SVrefine2PBcRDovetail_6861:HG4_Ill_Krunchall_19037:HG4_Ill_GATKHC_21984:HG4_Ill_250bpfermikitraw_18168:HG4_Ill_150bpfermikitraw_17489:HG3_Ill_Krunchall_18377:HG3_Ill_GATKHC_21897:HG3_Ill_GATKHCSBGrefine_9093:HG3_Ill_250bpfermikitraw_17873:HG2_PB_SVrefine2PBcRplusDovetail_2666:HG2_PB_SVrefine2PB10Xhap12_9928:HG2_PB_SVrefine2Falcon2Bionano_6841:HG2_PB_SVrefine2Falcon1plusDovetail_2804:HG2_Ill_scalpel_12986:HG2_Ill_SpiralSDKrefine_4054:HG2_Ill_SVrefine2DISCOVARplusDovetail_3138:HG2_Ill_Krunchall_18737:HG2_Ill_GATKHC_22016:HG2_Ill_GATKHCSBGrefine_9198:HG2_Ill_FB_11826:HG2_Ill_250bpfermikitraw_18399;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0961538;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.148148;PBcalls=10;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=2938;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=67;REFWIDENED=12:132871217-132871283;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:1/1:0/1:10:28:./.:8:8:3:15:1/1:0:6:1:6:1/1:1:36:./.:.:.:1291:.:.
chr12	132893488	HG3_PB_SVrefine2Falcon1Dovetail_8332	T	TCTACACCCACAGAGCACAGCCTGCATCCTACACCCCACAGAGCACAGCCTGCACCCTACACCCCACGGAGCATGGTCCTATTCTACACCCACAGAGCACAGCCTGCACC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8332:HG3_PB_SVrefine2PBcRDovetail_6516:HG3_PB_HySA_20749:HG2_PB_HySA_25049:HG4_PB_HySA_20045:HG4_PB_pbsv_13753;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8332;NumExactMatchSVs=1;ClusterMaxShiftDist=0.134615;ClusterMaxSizeDiff=0.134615;ClusterMaxEditDist=0.316742;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=109;DistBack=2836;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=8;REFWIDENED=12:132893487-132893497;PctSeqSimilarity=0.9487;PctSizeSimilarity=0.945;PctRecOverlap=0.1651;SizeDiff=6;StartDistance=-88;EndDistance=-88;GTMatch=0;TruScore=68;MatchId=1365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:19:0|1:18:1:2:19:0/0:12:0:14:0:0/0:17:0:./.:.:.:.:.:.
chr12	132897214	HG4_Ill_GATKHC_21987	G	GCCTGGGAGAGGCCCCTCTCCGATGCCGAGGTCAGAGGCCGAGACAGGGGT	20	PASS	ClusterIDs=HG2_PB_HySA_25050:HG4_Ill_Cortex_863:HG2_PB_pbsv_13768:HG3_Ill_Cortex_910:HG2_Ill_Cortex_2075:HG4_PB_pbsv_13754:HG4_Ill_svaba_17193:HG3_PB_pbsv_13462:HG4_Ill_Krunchall_19038:HG4_Ill_GATKHC_21987:HG4_Ill_GATKHCSBGrefine_9486:HG4_Ill_250bpfermikitraw_18169:HG4_Ill_150bpfermikitraw_17493:HG4_CG_vcfBeta_8727:HG3_PB_assemblyticsfalcon_6488:HG3_Ill_svaba_17317:HG3_Ill_Spiral_14331:HG3_Ill_Krunchall_18378:HG3_Ill_GATKHC_21900:HG3_Ill_GATKHCSBGrefine_9094:HG3_Ill_250bpfermikitraw_17874:HG3_Ill_150bpfermikitraw_17377:HG3_CG_vcfBeta_7436:HG2_Ill_svaba_17177:HG2_Ill_SpiralSDKrefine_4056:HG2_Ill_Krunchall_18738:HG2_Ill_GATKHC_22017:HG2_Ill_GATKHCSBGrefine_9200:HG2_Ill_250bpfermikitraw_18400:HG2_CG_vcfBeta_7793:HG3_PB_HySA_20750;NumClusterSVs=31;ExactMatchIDs=HG2_CG_vcfBeta_7793:HG2_Ill_250bpfermikitraw_18400:HG2_Ill_GATKHCSBGrefine_9200:HG2_Ill_GATKHC_22017:HG2_Ill_Krunchall_18738:HG2_Ill_SpiralSDKrefine_4056:HG2_Ill_svaba_17177:HG3_CG_vcfBeta_7436:HG3_Ill_150bpfermikitraw_17377:HG3_Ill_250bpfermikitraw_17874:HG3_Ill_GATKHCSBGrefine_9094:HG3_Ill_GATKHC_21900:HG3_Ill_Krunchall_18378:HG3_Ill_Spiral_14331:HG3_Ill_svaba_17317:HG3_PB_assemblyticsfalcon_6488:HG4_CG_vcfBeta_8727:HG4_Ill_150bpfermikitraw_17493:HG4_Ill_250bpfermikitraw_18169:HG4_Ill_GATKHCSBGrefine_9486:HG4_Ill_GATKHC_21987:HG4_Ill_Krunchall_19038:HG4_Ill_svaba_17193;NumExactMatchSVs=23;ClusterMaxShiftDist=0.15534;ClusterMaxSizeDiff=0.135922;ClusterMaxEditDist=0.317757;PBcalls=6;Illcalls=22;TenXcalls=0;CGcalls=3;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=3;HG2count=10;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=50;DistBack=3539;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=12:132897215-132897219;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1366.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:19:0|1:19:0:4:21:0|1:6:0:0:10:0/1:26:23:./.:.:.:.:.:.
chr12	132922107	HG2_Ill_150bpfermikitraw_17327	G	GAGACAATGGCTGCAGCACCCACCGCCCTCCCGCCTCTCCCGGGTCTCAGTCGGTCCC	20	PASS	ClusterIDs=HG4_PB_HySA_20047:HG2_PB_HySA_25052:HG2_PB_pbsv_13769:HG4_Ill_Cortex_864:HG2_Ill_Cortex_2076:HG4_PB_pbsv_13755:HG4_Ill_svaba_17197:HG4_Ill_manta_3229:HG4_Ill_Krunchall_19040:HG4_Ill_GATKHC_21989:HG4_Ill_GATKHCSBGrefine_9487:HG4_Ill_250bpfermikitraw_18172:HG4_Ill_150bpfermikitraw_17496:HG2_Ill_svaba_17181:HG2_Ill_Krunchall_18741:HG2_Ill_GATKHC_22019:HG2_Ill_GATKHCSBGrefine_9201:HG2_Ill_250bpfermikitraw_18403:HG2_Ill_150bpfermikitraw_17327;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17327:HG2_Ill_250bpfermikitraw_18403:HG2_Ill_GATKHCSBGrefine_9201:HG2_Ill_GATKHC_22019:HG2_Ill_Krunchall_18741:HG2_Ill_svaba_17181:HG4_Ill_150bpfermikitraw_17496:HG4_Ill_250bpfermikitraw_18172:HG4_Ill_GATKHCSBGrefine_9487:HG4_Ill_GATKHC_21989:HG4_Ill_Krunchall_19040:HG4_Ill_manta_3229:HG4_Ill_svaba_17197;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.275862;PBcalls=4;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=8882;DistForward=2200;DistMin=2200;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=104;REFWIDENED=12:132922108-132922211;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:22:0|1:26:1:0:17:0|1:12:0:0:15:0/1:15:20:./.:.:.:.:.:.
chr12	132964178	HG2_PB_SVrefine2Falcon1plusDovetail_2809	G	GAGAAAGGGGAGGGAGATGCGGGCTCAGAGAGAGGGGAGGGAGATGCGGGCTCAGAGAGGGGAGGGAGATGCGGGTCATAGAAGGGGAGGGAGATGCGGCTCAGAGAGGGGAGGGAGATGCGGGCTCAGAGAGAGGGGAGGGAGATGCGGGCTCAGAGAGAGGGGAGGGAGATGCGGGCTCAGAGAGAGGGGAGGGAATGCGGGCTCATAGAGAGGGAGGGAGATGCGGGCTCAGAGAGGGGAGGGAGATGCGGGCTCAGAGAGGGAAGATGCGGGCTCAGAGAGGGGAGGAGATGCGGGCTCAGAGAGGGGAGGGAGATGCGGGCTCAGAGAGGGGAGGGAGATGCGGGCTCAGAGAGGGGAGGGAGATGCGGGTCAGAGGGAGGGAGATGCGGGCTGAGAGAGAGGGAGGGAGATGCAGGCTCAGAGAGAGGGGAGGGAGAGTGTGATCTCAGAAAGAGAGGATGGAGATGTGAGCTCAGAGAGAGGAGGGAGATGCGGGCTCAGAGAGAGGGGACGGAGACGGGGCTCAGAGTGGGGGGGTAGATGCGGGCTCAGAGAGGGGAGAGAGATGCGGGCTCAGAGAGAGGAAGGGAGATGCGGGCTCAGTGAGAGGGGAGGGAGATGCAGGCTCAGAGAGGGGAGAGAGATGCGGGCTCAGAGAGAGGGAAGGGAGATGCGGGCTCAGTGAGAGGGAGGAGATGCGGGCTCAGAGAGGGGAGGGAGATGCGGGCTCAGAGAGAGGGGAGGGAGATGCGGGCTCAGTGAGAGGGAGGGAGATGCGGGCTCAGAGAGAGGGGAGGGAGATGGGACTC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8390:HG4_PB_pbsv_13763:HG2_PB_pbsv_13775:HG2_PB_HySA_25057:HG2_PB_SVrefine2Falcon1plusDovetail_2809:HG2_PB_SVrefine2Falcon2Bionano_6845:HG3_PB_SVrefine2Falcon1Dovetail_8338;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2809;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0630577;ClusterMaxSizeDiff=0.0606782;ClusterMaxEditDist=0.221297;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=814;DistBack=2654;DistForward=45;DistMin=45;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=849;REFWIDENED=12:132964179-132965027;PctSeqSimilarity=0.9779;PctSizeSimilarity=0.9737;PctRecOverlap=0.7013;SizeDiff=-22;StartDistance=-239;EndDistance=-239;GTMatch=0;TruScore=88;MatchId=1368.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:25:0|1:16:2:1:17:./.:4:2:11:1:0/0:12:0:0/1:12:18:.:.:.
chr12	133281894	HG2_Ill_150bpfermikitraw_17358	C	CACACACACACACACACACACACATATATATGTATATATGTGTCTATATAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17358:HG4_PB_pbsv_13784:HG2_PB_pbsv_13801:HG2_Ill_breakscan11_4452:HG4_Ill_scalpel_12693:HG4_Ill_Krunchall_19064:HG4_Ill_GATKHC_22039:HG4_Ill_150bpfermikitraw_17520:HG2_Ill_GATKHC_22059;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17358:HG4_Ill_scalpel_12693:HG4_Ill_Krunchall_19064:HG4_Ill_GATKHC_22039:HG4_Ill_150bpfermikitraw_17520:HG2_Ill_GATKHC_22059;NumExactMatchSVs=6;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.196429;PBcalls=2;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=68;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=17;REFWIDENED=12:133281893-133281912;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:26:./.:8:3:2:4:./.:1:18:0:19:0/1:13:39:./.:.:.:.:.:.
chr12	133295206	HG3_PB_pbsv_13501	T	TGTCCTGGTAGGGTGCGTGCTGGTGGGGTCTGTCCTGGGGTGGGCGGTCCCTGCAGTGGGGTGCGGCTGGTGGGTTTGTCCTGGGTGGGTCTGCGGGGTGGGGGTCCTGGTGGGTGTCCTGGTTGGGGTGCGTGCTGGATGCGGGTCGCTGGGTGGGGGTCCTGAGTGTGCGTGCACTGCTGGGTGGGTGTTTGTCGGGTGGGAGTGCATGCTGGGTGGGTGTGCCTGGGTGGGTGCGTCTGCCGAGTGGGGTGTCCTGTGGTGGGGTGCGTGCTGGGTGGGGGTCCTGGGTGGGTGCATGCTGGGATGGGTGTCCCTGGTGGGTGGTGCCGTTGCTGGGTGGGGGTGTCCTGGTGGGGTGCCGGCTGGGTGGGGTGTTCCGGGGTGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2677:HG2_PB_PB10Xdip_6906:HG2_PB_HySA_25131:HG3_PB_pbsv_13501:HG2_PB_SVrefine2PB10Xhap12_9947:HG3_PB_SVrefine2Falcon1Dovetail_8348:HG4_PB_SVrefine2Falcon1Dovetail_8402:HG2_PB_SVrefine2Falcon1plusDovetail_2821:HG2_PB_SVrefine2Falcon2Bionano_6858;NumClusterSVs=9;ExactMatchIDs=HG3_PB_pbsv_13501;NumExactMatchSVs=1;ClusterMaxShiftDist=0.138925;ClusterMaxSizeDiff=0.138925;ClusterMaxEditDist=0.311828;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=388;DistBack=22;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=12:133295180-133295231;PctSeqSimilarity=0.9268;PctSizeSimilarity=0.951;PctRecOverlap=0.5648;SizeDiff=-20;StartDistance=168;EndDistance=168;GTMatch=1;TruScore=81;MatchId=1370.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:46:./.:3:7:0:9:./.:16:1:10:1:./.:5:0:0/1:6:6:.:.:.
chr12	133304125	HG2_Ill_GATKHCSBGrefine_9214	C	CGCCCGGGCGGAGGAGAGGCATTGCTGAACCCTGGCACCGCGGGCACATGCGCCCGGACGGAGGAGACGCACTGCTGAACCCTGGCACCGTGGGCACACGCGCCCGGGCGGAGGAGAGGCACTGCTGAACCCTGGCACCGCGGGCACACGCGCCCGGATGGAGGAGATGCACTGCTGAACCCTGGCACCGTGGGCACACGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2822:HG4_PB_SVrefine2Falcon1Dovetail_8403:HG3_PB_assemblyticsfalcon_6519:HG3_PB_SVrefine2Falcon1Dovetail_8349:HG3_PB_pbsv_13502:HG2_PB_PB10Xdip_6907:HG4_PB_pbsv_13786:HG4_Ill_GATKHC_22042:HG4_Ill_GATKHCSBGrefine_9498:HG3_Ill_GATKHC_21941:HG3_Ill_GATKHCSBGrefine_9102:HG2_Ill_manta_3798:HG2_Ill_GATKHC_22062:HG2_Ill_GATKHCSBGrefine_9214:HG2_Ill_MetaSV_1169:HG4_PB_HySA_20089:HG2_PB_HySA_25133:HG4_PB_SVrefine2PBcRDovetail_6877:HG2_PB_SVrefine2PBcRplusDovetail_2678:HG2_PB_SVrefine2PB10Xhap12_9948:HG2_PB_SVrefine2Falcon2Bionano_6859:HG2_Ill_SVrefine2DISCOVARplusDovetail_3143:HG2_10X_SVrefine210Xhap12_9626;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9214:HG2_Ill_GATKHC_22062:HG2_Ill_manta_3798:HG3_Ill_GATKHCSBGrefine_9102:HG3_Ill_GATKHC_21941:HG4_Ill_GATKHCSBGrefine_9498:HG4_Ill_GATKHC_22042;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0643564;ClusterMaxSizeDiff=0.049505;ClusterMaxEditDist=0.183575;PBcalls=13;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=200;DistBack=-189;DistForward=16;DistMin=-189;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=205;REFWIDENED=12:133304117-133304321;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1371.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:32:1/1:3:24:1:7:1/1:0:15:1:13:1/1:0:35:./.:.:.:.:.:.
chr12	133319347	HG2_Ill_MetaSV_1170	C	CTCACCACCATCATCCTCACCACATCTTCACCATCATCATCCTCATCAGCATCACAACCATCATCACTACCATCACCCTCACCATCACCACCACAACCATCATCCTCCCTACCACCACCATTATCTCACTCACCATCACAATCCTCACCACTACCACCACCACCATCTTCATCCTCACCACCATCATGACCACATCATCACCATCTTCATCACCATCCTCACCACCATCATCCTCAACACAACCATCATCACTACCATCATCCTCACTACCACCACCACCGTCACCATCAACCACCATCACCATCACCATAATCACAATCACCAACATCATCACCACCATCATTCTCACTACCACCATCACCATCAAGTCATCACCACCATCATCATCCTCATTGTCACCATTACCACAATCCTCACCACTACCTCCATCACCACCTTCATCACCATCTTCATCACCACCATAATCATCTTTCTCACTACCACCGTCATCACCATCACCATCACCACCATCATTCTCACTACCACCATCACCATCATAATCATCACTATCACCATCACAACCATTATCCTCACCACCACCATCATTCTCACTACCATCACCACCACCATCACCACCATCATTCTACCACCGTCATCACCATTATAATCACCA	20	PASS	ClusterIDs=HG3_PB_pbsv_13506:HG2_PB_pbsv_13807:HG4_PB_pbsv_13789:HG2_PB_PB10Xdip_6909:HG2_Ill_breakscan11_4453:HG3_PB_SVrefine2PBcRDovetail_6526:HG3_Ill_MetaSV_1294:HG4_PB_SVrefine2PBcRDovetail_6880:HG4_PB_SVrefine2Falcon1Dovetail_8405:HG4_Ill_SVrefine2DISCOVARDovetail_9801:HG4_Ill_MetaSV_1244:HG2_PB_SVrefine2PB10Xhap12_9951:HG2_PB_SVrefine2Falcon2Bionano_6862:HG2_Ill_SVrefine2DISCOVARplusDovetail_3144:HG2_Ill_MetaSV_1170:HG2_PB_SVrefine2PBcRplusDovetail_2681:HG2_PB_SVrefine2Falcon1plusDovetail_2824:HG3_Ill_SVrefine2DISCOVARDovetail_9956:HG2_Ill_GATKHCSBGrefine_9216;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_MetaSV_1170:HG2_Ill_SVrefine2DISCOVARplusDovetail_3144:HG2_PB_SVrefine2Falcon2Bionano_6862:HG2_PB_SVrefine2PB10Xhap12_9951:HG4_Ill_MetaSV_1244:HG4_Ill_SVrefine2DISCOVARDovetail_9801:HG4_PB_SVrefine2Falcon1Dovetail_8405:HG4_PB_SVrefine2PBcRDovetail_6880;NumExactMatchSVs=8;ClusterMaxShiftDist=0.074129;ClusterMaxSizeDiff=0.0726464;ClusterMaxEditDist=0.225923;PBcalls=11;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=651;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=67;REFWIDENED=12:133319348-133319414;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1372.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:26:1:26:1/1:2:61:1:43:1/1:0:27:1/1:3:102:.:1016:.
chr12	133366259	HG4_Ill_Krunchall_19071	G	GCTCAGAAATAAAATACAGCAGGCCGGGCGCGGTGGCTCACACTTGTAATCCCAGCACT	20	PASS	ClusterIDs=HG2_Ill_GATKHC_22069:HG4_PB_pbsv_13794:HG2_PB_pbsv_13813:HG2_PB_HySA_25150:HG3_PB_HySA_20807:HG4_PB_HySA_20097:HG2_PB_PB10Xdip_6911:HG3_PB_pbsv_13512:HG4_Ill_SVrefine2DISCOVARDovetail_9803:HG4_Ill_Krunchall_19071:HG4_Ill_GATKHC_22047:HG3_Ill_SVrefine2DISCOVARDovetail_9960:HG3_Ill_GATKHC_21945:HG3_Ill_250bpfermikitraw_17913:HG2_PB_SVrefine2PBcRplusDovetail_2683:HG2_PB_SVrefine2PB10Xhap12_9954:HG2_PB_SVrefine2Falcon2Bionano_6865;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHC_22069:HG4_Ill_SVrefine2DISCOVARDovetail_9803:HG4_Ill_Krunchall_19071:HG4_Ill_GATKHC_22047:HG3_Ill_SVrefine2DISCOVARDovetail_9960:HG3_Ill_GATKHC_21945:HG3_Ill_250bpfermikitraw_17913:HG2_PB_SVrefine2PBcRplusDovetail_2683:HG2_PB_SVrefine2PB10Xhap12_9954:HG2_PB_SVrefine2Falcon2Bionano_6865;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0840336;ClusterMaxSizeDiff=0.0826446;ClusterMaxEditDist=0.247934;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=6;DistForward=21;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=118;REFWIDENED=12:133366260-133366377;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1373.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:3:21:1/1:1:9:2:16:./.:5:7:3:6:0/1:7:36:./.:.:.:.:.:.
chr12	133413068	HG2_PB_SVrefine2PB10Xhap12_9958	A	ACTCACAGTGACAGGCTCCCAGCAGGGCGCACGGCACTCACAGTGACAGGCTCCCAGCACGGCGCACGGCACTCACAGTGACAGGCTCCCAGCACGGCGCTCGGC	10	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_6535:HG3_PB_pbsv_13514:HG3_PB_HySA_20812:HG2_PB_HySA_25161:HG2_PB_SVrefine2Falcon1plusDovetail_2833:HG2_PB_SVrefine2PB10Xhap12_9958:HG3_PB_SVrefine2Falcon1Dovetail_8358;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9958;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0654206;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.168224;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=104;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1875;REFWIDENED=12:133422850-133413178;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9905;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1374.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:19:1|0:1:23:13:2:./.:0:1:1:0:./.:2:1:./.:.:.:.:.:.
chr13	19711565	HG2_PB_SVrefine2Falcon1plusDovetail_2843	T	TTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTGTTCTTTGTTGCGGTGTTACTGACAGTATAGGGAGTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8367:HG2_PB_pbsv_13831:HG2_PB_PB10Xdip_8542:HG2_PB_PB10Xdip_8541:HG2_PB_HySA_25185:HG2_PB_SVrefine2Falcon2Bionano_6875:HG4_PB_SVrefine2Falcon1Dovetail_8415:HG2_PB_SVrefine2PBcRplusDovetail_2697:HG2_PB_SVrefine2PB10Xhap12_9969:HG2_PB_SVrefine2Falcon1plusDovetail_2843;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2843:HG2_PB_SVrefine2PB10Xhap12_9969:HG2_PB_SVrefine2PBcRplusDovetail_2697:HG4_PB_SVrefine2Falcon1Dovetail_8415;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0968858;ClusterMaxSizeDiff=0.094579;ClusterMaxEditDist=0.124567;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=432;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=963;REFWIDENED=13:19711566-19712528;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:./.:3:46:0:1:./.:1:0:0:0:./.:0:1:./.:1:3:.:.:.
chr13	19825786	HG2_10X_SVrefine210Xhap12_9638	C	CTAGAGATCTAGACATCCAAATACCAGAAGTTCCAAGAACACCCTGGAAATTCATCACAGAAATTATCACCACCTAGGCACATAGTCATCAGGTTATCTAAAGTCAAGATGAAGGAAAACAATTTTAAGAGCTGTGAAGCAAAAGCATCAGGTAACCTATAAAGGAAAATCAACCAGATTAACAGCAGATTTCTCAGCAGAAACCCTACAAGCCAGAATAATTGGCATTCTATCTTTAGCCTCCTTAAACAAAAAAATTATCAGCTAAAAATTTTGTATCTAGTGAAACTAAGCTTCCTAAATGAAGAGTGGTAAAGTCCTTTTCCAACAAAAAATGCTGAGAGAATTCACCACTACCAAGCCAGCACAAAAAATGCTAAAAGGAGCTCTAAACCTTGAAACAAAACCTCCACAGACACCAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_13528:HG4_Ill_GATKHCSBGrefine_9512:HG3_Ill_GATKHCSBGrefine_9116:HG2_Ill_GATKHCSBGrefine_9229:HG2_PB_PB10Xdip_8547:HG2_PB_PB10Xdip_8546:HG4_PB_HySA_20135:HG3_Ill_manta_3121:HG2_PB_SVrefine2PB10Xhap12_9972:HG2_Ill_SVrefine2DISCOVARplusDovetail_3156:HG4_Ill_MetaSV_1251:HG3_Ill_MetaSV_1300:HG2_Ill_MetaSV_1177:HG4_PB_HySA_20134:HG2_PB_pbsv_13834:HG4_PB_pbsv_13815:HG2_PB_assemblyticsfalcon_6550:HG4_PB_assemblyticsfalcon_6461:HG3_PB_assemblyticsfalcon_6553:HG2_PB_assemblyticsPBcR_6331:HG2_PB_SVrefine2Falcon1plusDovetail_2844:HG4_PB_SVrefine2Falcon1Dovetail_8418:HG3_PB_SVrefine2Falcon1Dovetail_8369:HG4_PB_SVrefine2PBcRDovetail_6894:HG4_Ill_SVrefine2DISCOVARDovetail_9811:HG3_PB_SVrefine2PBcRDovetail_6539:HG3_Ill_SVrefine2DISCOVARDovetail_9966:HG2_PB_SVrefine2PBcRplusDovetail_2698:HG2_PB_SVrefine2PB10Xhap12_9971:HG2_PB_SVrefine2Falcon2Bionano_6877:HG2_Ill_SVrefine2DISCOVARplusDovetail_3155:HG2_10X_SVrefine210Xhap12_9638:HG2_PB_HySA_25188;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9638:HG2_Ill_SVrefine2DISCOVARplusDovetail_3155:HG2_PB_SVrefine2Falcon2Bionano_6877:HG2_PB_SVrefine2PB10Xhap12_9971:HG2_PB_SVrefine2PBcRplusDovetail_2698:HG3_Ill_SVrefine2DISCOVARDovetail_9966:HG3_PB_SVrefine2PBcRDovetail_6539:HG4_Ill_SVrefine2DISCOVARDovetail_9811:HG4_PB_SVrefine2PBcRDovetail_6894;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0874568;ClusterMaxSizeDiff=0.0874568;ClusterMaxEditDist=0.194631;PBcalls=21;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=423;DistBack=16256;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=13:19825787-19825792;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9976;PctRecOverlap=0.9882;SizeDiff=1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=1377.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:./.:0:0:0:0:./.:0:3:0:5:1/1:0:29:./.:3:50:.:.:.
chr13	20921630	HG4_Ill_SVrefine2DISCOVARDovetail_9815	C	CGCTGAAAAAGAAACGTATTTCAGAGTCAGTCACTTGAGTTTGAATCACAATGTTTTCATTTACAACCATGAGATCTGTCACCTCATCTCATTTTTATCAGCATT	20	PASS	ClusterIDs=HG3_PB_HySA_20845:HG4_PB_pbsv_13822:HG2_PB_HySA_25208:HG2_PB_pbsv_13841:HG3_PB_SVrefine2Falcon1Dovetail_8373:HG3_PB_pbsv_13535:HG4_PB_SVrefine2Falcon1Dovetail_8420:HG2_10X_SVrefine210Xhap12_9640:HG4_Ill_SVrefine2DISCOVARDovetail_9815:HG4_Ill_GATKHCSBGrefine_9515:HG3_Ill_SVrefine2DISCOVARDovetail_9972:HG3_Ill_GATKHCSBGrefine_9121:HG2_PB_SVrefine2Falcon1plusDovetail_2846:HG2_Ill_SVrefine2DISCOVARplusDovetail_3163:HG2_Ill_GATKHCSBGrefine_9232:HG2_PB_SVrefine2Falcon2Bionano_6879;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9232:HG2_Ill_SVrefine2DISCOVARplusDovetail_3163:HG2_PB_SVrefine2Falcon1plusDovetail_2846:HG3_Ill_GATKHCSBGrefine_9121:HG3_Ill_SVrefine2DISCOVARDovetail_9972:HG4_Ill_GATKHCSBGrefine_9515:HG4_Ill_SVrefine2DISCOVARDovetail_9815:HG4_PB_SVrefine2Falcon1Dovetail_8420;NumExactMatchSVs=8;ClusterMaxShiftDist=0.138889;ClusterMaxSizeDiff=0.12963;ClusterMaxEditDist=0.273128;PBcalls=9;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=104;DistBack=516;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=99;REFWIDENED=13:20921631-20921729;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1378.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:0|1:31:7:2:18:./.:4:0:1:20:0/1:21:24:./.:.:.:.:.:.
chr13	22188479	HG2_PB_SVrefine2PBcRplusDovetail_2709	T	TAAGAATCAATAGGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGAACATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_20176:HG3_PB_pbsv_13551:HG2_PB_pbsv_13856:HG4_PB_pbsv_13836:HG2_PB_assemblyticsPBcR_6370:HG2_PB_PB10Xdip_8586:HG2_PB_PB10Xdip_8585:HG3_PB_HySA_20866:HG3_PB_SVrefine2Falcon1Dovetail_8382:HG4_Ill_MetaSV_1257:HG4_Ill_GATKHCSBGrefine_9528:HG3_PB_SVrefine2PBcRDovetail_6548:HG3_Ill_MetaSV_1305:HG3_Ill_GATKHCSBGrefine_9129:HG2_PB_SVrefine2PBcRplusDovetail_2709:HG2_PB_SVrefine2PB10Xhap12_9992:HG2_PB_SVrefine2Falcon2Bionano_6885:HG2_Ill_MetaSV_1182:HG2_Ill_GATKHCSBGrefine_9241:HG2_10X_SVrefine210Xhap12_9647:HG2_PB_SVrefine2Falcon1plusDovetail_2854:HG4_PB_SVrefine2Falcon1Dovetail_8428:HG2_PB_HySA_25232;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9647:HG2_Ill_GATKHCSBGrefine_9241:HG2_Ill_MetaSV_1182:HG2_PB_SVrefine2Falcon2Bionano_6885:HG2_PB_SVrefine2PB10Xhap12_9992:HG2_PB_SVrefine2PBcRplusDovetail_2709:HG3_Ill_GATKHCSBGrefine_9129:HG3_Ill_MetaSV_1305:HG3_PB_SVrefine2PBcRDovetail_6548:HG4_Ill_GATKHCSBGrefine_9528:HG4_Ill_MetaSV_1257;NumExactMatchSVs=11;ClusterMaxShiftDist=0.141287;ClusterMaxSizeDiff=0.141287;ClusterMaxEditDist=0.183835;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=316;DistBack=33722;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:22188480-22188494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1379.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:1/1:0:13:0:17:1/1:0:13:0:7:1/1:0:23:1/1:1:51:.:.:.
chr13	22299993	HG2_PB_SVrefine2Falcon1plusDovetail_2855	A	ACATCACCACCACAACCACTACCACCAACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCCAACCATCACCATCACCATCATCACCACCACCATCACCAACACCACCACCATCACCATCACCATCATCACTGCCACCATCACCAACACCACCACCATCACCACTATCACCATCACCACCACCATCACCATCACCACCACCATCACCACCACCACCATCACCACCAACATCACCACCAGCATCACCAACACCATCACCACCACCACCACCAGCACCACCACCACTGCCATCACCACCACCATCATCACCATCACCATCAACACCATCACCACCACTAGCACCACCACCACCAGCACCACCACCACCACCATCACCATAACCATCACCACCACCACCACCATCACCATAACCACCACCATCACCACCACCACCACCACCATCACCATAACCACCATCACCACCATCACCATAACCACAATCACCATCACCATAACCACCACCACCACCACCATCACCATCACCACCACCACCATCACTATCACCACCATCACCGTAACCACCACCACCACCCACCACCATCACCACCATCACCACCATCACCGTAACCACCACCACCATCACCATAACCACCACCATCACCACCACCAGCACCAGCACCACCAACACCACGACCACCATCATCACCACCATCACCACCATCACCATCATCACCACCACCACCACCATCACCACCACCACCATCACCACCACCACCACCACCACCACCACCATCACCATCACCACCATCACCATCACCTCACCACTACCACCACCATCACCACCACCATCACCACCACCATCACCACCACCACCACCACCATCACCACCATCACCACCACCACCATCATCACCACCACCACCACCATCACCACCACCACCACCATCACCACCACCACCATCACCACCACCACAACCACCACCACCATCACCACCACCATCACCACCACCACCACCACCATCACCACCTCACCACCACCACATCACCACCACCACCACCACCATCACCACCACCACCACCATCACCACACCATCACCACCACCATCACCACCACCACCACCACCACATCACCATCACCATAACCACCACCACCATCACTATCACCATACCACCAACCACACCATCACCATCACCAGAACCACCATCACCACATCACCATAACCACCACCACCATCACCATCACCACCACCATCAACCCACCACCACCATCACCACCACCACACCACCATCACCATCCACCACCACCACCACCATCACCACACCACCACCATCACCACCATCACCACACCACCACCACCCACCATCACCACCACCACATCACCACCACCATCACCACCACCACCACCCACCACCATCACCACCACCACCATCACCACCACCACCACCACCATCACCACCACCATCACCACCACCACCATCACCACCACCACATCACCACACCATAACCAGCCCCACCACCCACCCATCACTATCATCATCACCACCACCACCACCACCACCATCACCACCATCACCAGAACCATCATCACCATCACCATAACCACCACCACCATCACCATCACCACCACCATCACCACCACCACCACCACCATCACCACCACCAGCAAGCAGCACCATCATCACCACCACCACCACCATCACCACCATCACCATCATCACCACCACCATCACCACCACCACCATCACCACCACCATCACCATAACCACCACCACCACCATCACCACCACCATCACCATCACCACCATCACATCACCACCATCACCACCATCAGCACCATCACCATCACCACCATCACCACCACCACCACCACACCATCCACCACCATCACCACACCACCACCACCACCACCATCACCACCACCACAACCACACCACCACCACCATCACCATCACCACCACCACCACCATCACTACCATCACCACCACCCACCACCACCACCATCACCACCACCATCACCACCACCACCACCACCACCACTACCACCACCATCACCACCACCACCACCACTACCACCACCATCACCACCACCACCACCACCATCACCATCACCATAACCACCACCACCATCACCACCACCATCACCACCATCACCATAACCACCACCACCACCATCACCACACCACCACCACCACCACCATCACCACCCATCACCACCAACCACCACCATCACACCACCACCACCACATCACCACCACCACAACCACCACCACCACCATCACCATCACCACCACCACCACCATCACCACCACCTTCACCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCATCACCACCACCACCACCCACCATCACCACCACCACCATCACCACACCACCACCACCACCACTACCACCACCATCACCACCACCACCACCACCATCACCACCACCACCATCACCATCAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2855:HG4_PB_pbsv_13837:HG2_PB_pbsv_13857:HG2_Ill_breakscan11_4455:HG3_PB_pbsv_13552:HG3_PB_SVrefine2Falcon1Dovetail_8383:HG4_PB_SVrefine2Falcon1Dovetail_8429:HG2_PB_SVrefine2Falcon2Bionano_6886:HG3_PB_SVrefine2PBcRDovetail_6549:HG2_PB_SVrefine2PB10Xhap12_9993:HG2_PB_SVrefine2PBcRplusDovetail_2710:HG4_PB_SVrefine2PBcRDovetail_6903;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2855;NumExactMatchSVs=1;ClusterMaxShiftDist=0.159856;ClusterMaxSizeDiff=0.159455;ClusterMaxEditDist=0.269023;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=2468;DistBack=9803;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=129;REFWIDENED=13:22299997-22300125;PctSeqSimilarity=0.9852;PctSizeSimilarity=0.9988;PctRecOverlap=0.9733;SizeDiff=-3;StartDistance=-65;EndDistance=-65;GTMatch=1;TruScore=98;MatchId=1380.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:76:1/1:0:26:2:31:./.:3:16:9:6:0/1:8:5:1/1:8:400:.:2621:.
chr13	22530349	HG2_PB_SVrefine2PB10Xhap12_9996	T	TAAAAAACCATCAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_20871:HG3_PB_pbsv_13557:HG2_PB_pbsv_13861:HG2_PB_assemblyticsPBcR_6374:HG3_Ill_MetaSV_1308:HG4_PB_SVrefine2PBcRDovetail_6906:HG4_PB_SVrefine2Falcon1Dovetail_8431:HG4_Ill_MetaSV_1259:HG4_Ill_GATKHCSBGrefine_9531:HG3_PB_SVrefine2PBcRDovetail_6554:HG3_PB_SVrefine2Falcon1Dovetail_8385:HG3_Ill_GATKHCSBGrefine_9134:HG2_PB_SVrefine2PBcRplusDovetail_2713:HG2_PB_SVrefine2PB10Xhap12_9996:HG2_PB_SVrefine2Falcon2Bionano_6888:HG2_Ill_MetaSV_1183:HG2_Ill_GATKHCSBGrefine_9243:HG2_10X_SVrefine210Xhap12_9652:HG2_PB_SVrefine2Falcon1plusDovetail_2857:HG4_PB_pbsv_13841:HG2_PB_PB10Xdip_8601:HG2_PB_PB10Xdip_8600:HG4_PB_HySA_20183:HG2_PB_HySA_25236;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9652:HG2_Ill_GATKHCSBGrefine_9243:HG2_Ill_MetaSV_1183:HG2_PB_SVrefine2Falcon2Bionano_6888:HG2_PB_SVrefine2PB10Xhap12_9996:HG2_PB_SVrefine2PBcRplusDovetail_2713:HG3_Ill_GATKHCSBGrefine_9134:HG3_PB_SVrefine2Falcon1Dovetail_8385:HG3_PB_SVrefine2PBcRDovetail_6554:HG4_Ill_GATKHCSBGrefine_9531:HG4_Ill_MetaSV_1259:HG4_PB_SVrefine2Falcon1Dovetail_8431;NumExactMatchSVs=12;ClusterMaxShiftDist=0.12381;ClusterMaxSizeDiff=0.12381;ClusterMaxEditDist=0.204019;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=313;DistBack=6790;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=13:22530350-22530362;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:./.:0:11:0:2:1/1:0:7:0:6:./.:1:18:1/1:1:67:.:.:.
chr13	23023796	HG3_Ill_150bpfermikitraw_17461	G	GTAATGAATGATGTTAATTATAGGGAAAACTTGCATCCAGTTTTCCCTATAATTAACATCATTCATTACCATGGCTTGTCACAGC	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_6379:HG2_PB_PB10Xdip_8610:HG3_PB_pbsv_13560:HG4_PB_pbsv_13846:HG2_PB_pbsv_13867:HG2_PB_PB10Xdip_8609:HG4_Ill_SVrefine2DISCOVARDovetail_9826:HG4_Ill_250bpfermikitraw_18249:HG3_PB_SVrefine2PBcRDovetail_6556:HG3_PB_SVrefine2Falcon1Dovetail_8388:HG3_Ill_manta_3129:HG3_Ill_Spiral_14392:HG3_Ill_SVrefine2DISCOVARDovetail_9986:HG3_Ill_Krunchall_18449:HG3_Ill_GATKHC_22011:HG3_Ill_GATKHCSBGrefine_9149:HG3_Ill_250bpfermikitraw_17962:HG3_Ill_150bpfermikitraw_17461:HG2_PB_SVrefine2Falcon1plusDovetail_2859:HG2_Ill_manta_3807:HG2_Ill_Krunchall_18814:HG2_Ill_250bpfermikitraw_18488:HG2_PB_HySA_25245:HG4_Ill_manta_3240:HG4_Ill_Krunchall_19115:HG4_Ill_250bpfermikitraw_18248:HG2_Ill_Krunchall_18813:HG2_Ill_250bpfermikitraw_18487;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18488:HG2_Ill_Krunchall_18814:HG2_Ill_manta_3807:HG2_PB_SVrefine2Falcon1plusDovetail_2859:HG3_Ill_150bpfermikitraw_17461:HG3_Ill_250bpfermikitraw_17962:HG3_Ill_GATKHCSBGrefine_9149:HG3_Ill_GATKHC_22011:HG3_Ill_Krunchall_18449:HG3_Ill_SVrefine2DISCOVARDovetail_9986:HG3_Ill_Spiral_14392:HG3_Ill_manta_3129:HG3_PB_SVrefine2Falcon1Dovetail_8388:HG3_PB_SVrefine2PBcRDovetail_6556:HG4_Ill_250bpfermikitraw_18249:HG4_Ill_SVrefine2DISCOVARDovetail_9826;NumExactMatchSVs=16;ClusterMaxShiftDist=0.195122;ClusterMaxSizeDiff=0.195122;ClusterMaxEditDist=0.268293;PBcalls=10;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=13:23023797-23023803;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:70:1/1:1:35:1:30:1/1:0:19:0:21:./.:3:35:./.:.:.:.:.:.
chr13	23253526	HG2_PB_SVrefine2PB10Xhap12_10003	C	CCACCACCACCTTCACCACCACCATTACAACCACCACCATTACCACTACCACCACCATCACCACTAACATCACCACCACCTTTATCACCATCAACACAACCACCACCTTCACTATCCCCATCACCACCACCACAATCACCTTCATCACCACTACCTTCACAACCACCACCACAACTGCTAATCACCACCATCTTAACCACAACTACTATCATCACCACTACCATCTACCTTGGCAACCACAACCACCACCACCACCTTCACCACCAACACCAACACCACTACCACCTTCACCATCACCATCACAACCACCACAATTACTGCCACCACCATGACAACTGTTACCACCACCGGCATCGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2718:HG3_PB_pbsv_13563:HG2_PB_pbsv_13869:HG4_PB_HySA_20188:HG2_PB_PB10Xdip_8612:HG2_Ill_breakscan11_4458:HG2_PB_PB10Xdip_8613:HG4_PB_HySA_20187:HG4_Ill_MetaSV_1261:HG4_Ill_GATKHCSBGrefine_9540:HG3_Ill_MetaSV_1311:HG3_Ill_GATKHCSBGrefine_9153:HG2_Ill_manta_3809:HG2_Ill_MetaSV_1185:HG2_Ill_GATKHCSBGrefine_9252:HG4_PB_pbsv_13848:HG2_PB_SVrefine2Falcon1plusDovetail_2861:HG3_PB_SVrefine2Falcon1Dovetail_8390:HG4_Ill_SVrefine2DISCOVARDovetail_9830:HG4_PB_SVrefine2PBcRDovetail_6910:HG4_PB_SVrefine2Falcon1Dovetail_8434:HG3_PB_SVrefine2PBcRDovetail_6558:HG3_Ill_SVrefine2DISCOVARDovetail_9989:HG2_PB_SVrefine2PB10Xhap12_10003:HG2_PB_SVrefine2Falcon2Bionano_6892:HG2_Ill_SVrefine2DISCOVARplusDovetail_3170;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3170:HG2_PB_SVrefine2Falcon2Bionano_6892:HG2_PB_SVrefine2PB10Xhap12_10003:HG3_Ill_SVrefine2DISCOVARDovetail_9989:HG3_PB_SVrefine2PBcRDovetail_6558:HG4_PB_SVrefine2Falcon1Dovetail_8434;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0767123;ClusterMaxEditDist=0.227815;PBcalls=15;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=356;DistBack=5357;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=101;REFWIDENED=13:23253527-23253627;PctSeqSimilarity=0.9883;PctSizeSimilarity=0.9916;PctRecOverlap=0.9248;SizeDiff=-3;StartDistance=-26;EndDistance=-26;GTMatch=0;TruScore=96;MatchId=1383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:1:21:2:15:./.:18:241:28:299:1/1:0:28:1/1:1:63:.:.:.
chr13	23580860	HG2_Ill_SVrefine2DISCOVARplusDovetail_3172	A	CTAATGGTAGATGAGGAAAAAACATACAGGAGGGAGAAGTGGGAGGATGTTTATTCAGGAAATAAAATATGAAATGGGGAGGGTTGCTACGTGGAAAACTAGAACCAGACCAGTGATAGTAACAGAATAGCGGTAGATTCCTAGGGTTGCTGAGATTCTCTTGAAGAAAGGAGTTTCTGGGTTTTATCTTTGAGATACTTAAAAAAAATTGGGTGGAGTATGGCCCAAGCATCTGAAAACAATACCAATTTCCTTAGGTGACCTTGAGTGCATAAGCCTGAATTCTGGAATTTTATATTACATGCTTACATTTCTTTTTACCCTAACATTATCAGCTCTTTGAGGGAAAAAGTAGGTCTCAAAATATGAATGCCAAGATTCTCAAGAATATCAGCTACCATGTGTTGTGTACTTACTGTGTTCAAGGCACATGGTGGATACTCCTCATTTATTTTATCTACTCTTCATTAAAACCCTCGAAGTTGAGGTACTGATGGCCCTCATTTGGAGATGAAGAAAGGGGATGGAAAGGAGTTAAGCACTTGGCCAGAATCACACAGCTAGTATCAGGTCTTCTGAAAACCATAGTCATGCTTTTTTATCTTCATTTTGCTTTCTGAGCTAATTAACCAGATTACATGGTTGATAAAATAATTTAAATGTCATAACTTTGTAAAAGGAAGACAGAATTTTGTAAAAGTAGCAATGCAATTTCAATAATTAACCTTAAATGCTAAACAGTTAAGTGAAGGTTTTACACAATTTATCTAATTCAACACCATTGTCTTCCCTGGATATTTAGTTTTTCTATTTATAATGTTTGCTGTGTGCTTTTAGTTTATTACTCTATCTTACAATCCCTTATTTCAACATTTACTTTTTTTCTTTCATATAGTATTGCATTGGAATTTCTCGGTTCTTAAGAAGAAAAGATTATTTGTATTTCTATGATAGGATTAAAGAGGTTTACTAAACAGATTTGGTGAAACTAAAAGAGACCAGTAACGAGTCAATTGTGACTGCCATTTTTTTCAGAGTTTTGAATTAAACTACTCTAAAATTTTGTATTATACCTTGAAGAGATATTTTAGAAATGGAAGGCTTCAACTTTATTTTTCCTCATAAATGTTTGGGAATCCTGATTTCATTCCAAATCCCCCTCCTTCCACCACAGAATCTGGAATAATGAACTCCTCTAGAGATGATAAACATCTGTTGCTTTCAGAGGGCAATTTGCAGACCTTATTTTATTTCTTATTTTGACTCACTAAAGAAGTAGAGATATTCTTCTTATCTACTTTTAGCAAATGAGGTAATTGAAGCTTAGGGAGTCAAAGAACTTGCCCAAGATCAATAGCTATCAGGTGGTGGAGCTCTCATTCTAATAAAGCTGACCACAAAACCTATATTCATAGCTCCTACAATTGCAAGGCAAGGGACGTTGAATATCACAAATGTGTGTGGTGGTTTTAACACAAATTATAGAGCACAGATCAGTGATTGAGGAGTAGAAGATATACATCAACCAAAGATAAAAGCTGGTATTTGCAAGATTGAAAAGATATACAACTACACAGAAAACATTTCCAAAACCAATTGGAAATTAATTAAATGCAGTATTGAGCAACTGTTTGGACGTAATTTAAAGTTTCATTAATTGAGGAAATGCTGAAAAAATATACAGTGATATATTTTACAGAGATCAAAGGAACGATAGGATTTACATAGGCTGATTTTGAAAGGTCTTTGATTTGCGAGTTAAAAAATAGGCACATTACAAAACAGTGTGTAGTGTATGGGTGAACACAATCAATGACAAGACTTGTGTGGGCGAGTATGTATGTGCAGTTGCTTATGTACAAACTGTAAGATAAATTCTTACAGGAGGCATTCCTGAGGTATAGGTTTGCATATTTAAAATGTTGATGGATACTGACCAATATAATTCTCTCTACCCAGAGGTGGATATAAGTATGTATTTTTACATCCTCTTGCCAATCATAATTTTTTCTAATATTCTATTCACAGAATATTTAGTTTTAATTTGCATTTTTTCATTAATGTGGTATAGTACATTCCATTTGTCAATTAACTATACAAATCTTTTCTCATTTTGGGTTACTTGGTTTATTTTTTATTTTTAGGGTCTTCTGCTTTATAATATATGTAACCTGTTTTAATGTCTTGTGTTGGGAACAGGCCCCCCAAAATCTGGCCATAAACTGGCCACAAAACTGGCCATAAACAAAATCTCTGCAGCACTGTGACATGTTCATGATGGCCATGACGCCCATGCTGGAAGGTTGTGGGTTTACCGGAATGAGGGCAAGGAACACCTGGCCCACCCAGGGCAGAAACCGCTTAAAGGCATTCTTAAACCACAAACAATAGCATGAGCAATCTGTGCCTTAAGGACATGCTCCTGCTGCAGATAACTAGCCCAACCCATCCCTTTATTTCGGCCCATCCCTTCATTTCCCATAAGGGATACTTTTAGTTAATCTAATATCTATAGCAACAATGCTAATGACTGGCTTGCTGTTAATAAATATGTAGGTAAGTCTCTGTTTGGGGCTCTCAGCTCTGAAGGCTGTGAGACCCCTGATTTCCCACTTCACACTTCTATATTTCTGTGTGTGTGTCTTTAATTCCTCTAATGCCACTGGGTTAGGGTCTCCCTGACCGAGCTGGTATCGACAAGTGGCACCCATATGTGGGGGCTCAAATCCAGGCCAAAGGTTCACCGGAGCGACAGTTGGAGAACGTGGAACTAGCTGGAGGACACCTGAGTACTCTTAAAGCAATCCCCGTGGTGAGTAAGAAGAGGAGCTCAGAAGCATCAGGG	20	PASS	ClusterIDs=HG3_PB_HySA_20882:HG2_PB_SVrefine2PB10Xhap12_10007:HG2_PB_SVrefine2PBcRplusDovetail_2722:HG2_Ill_SVrefine2DISCOVARplusDovetail_3172:HG2_10X_SVrefine210Xhap12_9658:HG2_PB_SVrefine2Falcon1plusDovetail_2866:HG3_PB_SVrefine2PBcRDovetail_6562:HG3_PB_SVrefine2Falcon1Dovetail_8395:HG4_PB_SVrefine2Falcon1Dovetail_8439:HG3_PB_pbsv_13568:HG2_PB_HySA_25253;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9658:HG2_Ill_SVrefine2DISCOVARplusDovetail_3172:HG2_PB_SVrefine2PBcRplusDovetail_2722;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0735558;ClusterMaxSizeDiff=0.073197;ClusterMaxEditDist=0.140653;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=2844;DistBack=43183;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=13:23580861-23580863;PctSeqSimilarity=0.9998;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:44:0|1:32:0:0:39:0|1:30:0:0:7:0/1:30:17:0/1:89:186:.:5619:.
chr13	24482740	HG4_Ill_GATKHCSBGrefine_9546	T	TTATAACTGATTTTATTTATTTATTTATTTATTTTTTTTTTTTTTATTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2870:HG3_PB_SVrefine2Falcon1Dovetail_8399:HG4_PB_HySA_20202:HG2_PB_pbsv_13876:HG4_PB_pbsv_13859:HG4_PB_HySA_20201:HG4_PB_SVrefine2PBcRDovetail_6915:HG4_PB_SVrefine2Falcon1Dovetail_8444:HG4_Ill_manta_3242:HG4_Ill_SVrefine2DISCOVARDovetail_9835:HG4_Ill_MetaSV_1264:HG4_Ill_GATKHCSBGrefine_9546:HG2_Ill_SVrefine2DISCOVARplusDovetail_3178:HG2_Ill_MetaSV_1189:HG2_Ill_GATKHCSBGrefine_9257:HG2_PB_HySA_25262:HG2_Ill_breakscan11_4459;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9257:HG2_Ill_MetaSV_1189:HG2_Ill_SVrefine2DISCOVARplusDovetail_3178:HG4_Ill_GATKHCSBGrefine_9546:HG4_Ill_MetaSV_1264:HG4_Ill_SVrefine2DISCOVARDovetail_9835:HG4_Ill_manta_3242:HG4_PB_SVrefine2Falcon1Dovetail_8444:HG4_PB_SVrefine2PBcRDovetail_6915;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0994152;ClusterMaxSizeDiff=0.0994152;ClusterMaxEditDist=0.174785;PBcalls=9;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=339;DistBack=31;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:24482741-24482756;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1386.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:45:0|1:27:7:7:32:0|1:23:0:0:5:0/1:30:16:0/1:8:43:.:.:.
chr13	24620675	HG2_Ill_GATKHCSBGrefine_9259	T	TCATATGGTGTGTACTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCCGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG3_PB_pbsv_13573:HG4_Ill_MetaSV_1265:HG2_PB_pbsv_13877:HG3_PB_SVrefine2Falcon1Dovetail_8400:HG4_PB_pbsv_13860:HG4_PB_SVrefine2PBcRDovetail_6916:HG4_PB_SVrefine2Falcon1Dovetail_8445:HG3_Ill_MetaSV_1313:HG3_Ill_GATKHCSBGrefine_9157:HG2_Ill_MetaSV_1190:HG2_Ill_GATKHCSBGrefine_9259:HG4_PB_HySA_20205;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9259:HG2_Ill_MetaSV_1190:HG3_Ill_GATKHCSBGrefine_9157:HG3_Ill_MetaSV_1313;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0591716;ClusterMaxSizeDiff=0.0591716;ClusterMaxEditDist=0.242075;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=8173;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=13:24620676-24620695;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:26:0|1:32:0:2:27:./.:1:5:26:0:0/1:30:11:0/1:5:38:.:.:.
chr13	24626970	HG3_PB_SVrefine2PBcRDovetail_6567	G	GATCCTCCCCGCCCCCCCCGCCCCCCCGCCCCCCCCCCCCCCCGCCCCCCCCCCCCCGCCCCCCCGCCCCCCGCCCCCCCGCCCCCCCCCCCCGCTTACCCCCGCCCCCCCCGCAGCTGTGCCCCCGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6567:HG3_PB_pbsv_13574:HG4_PB_SVrefine2Falcon1Dovetail_8446:HG4_PB_HySA_20206:HG2_PB_HySA_25267:HG3_PB_HySA_20889:HG4_Ill_SVrefine2DISCOVARDovetail_9836:HG3_Ill_SVrefine2DISCOVARDovetail_9994:HG2_PB_PB10Xdip_8633:HG2_PB_PB10Xdip_8632:HG2_PB_pbsv_13878:HG3_PB_SVrefine2Falcon1Dovetail_8401:HG4_PB_pbsv_13861:HG4_PB_SVrefine2PBcRDovetail_6917:HG2_PB_SVrefine2Falcon1plusDovetail_2871:HG2_PB_SVrefine2Falcon2Bionano_6898:HG2_PB_assemblyticsPBcR_6400:HG2_PB_SVrefine2PBcRplusDovetail_2726:HG2_PB_SVrefine2PB10Xhap12_10014;NumClusterSVs=19;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_6567;NumExactMatchSVs=1;ClusterMaxShiftDist=0.257028;ClusterMaxSizeDiff=0.257028;ClusterMaxEditDist=0.367521;PBcalls=17;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=127;DistBack=6261;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=13:24626971-24626982;PctSeqSimilarity=0.9453;PctSizeSimilarity=0.9407;PctRecOverlap=0.9333;SizeDiff=-8;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=93;MatchId=1388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:23:0:24:./.:0:4:0:9:0/1:2:14:./.:.:.:.:.:.
chr13	25096907	HG4_Ill_SVrefine2DISCOVARDovetail_9840	C	CAGTGGCTCACCCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGCCAGGAGATTGAGACCATCCTAGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACAGTGAGCGGAGATTGCACCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCAAAAAGACAGTGAAAGACAACTCCATATCTTAGACGATTTTGGCACAAACCTTTCTTATATTTACTATGTCTGAATATTCACGTTTTTATTTGAAAGTTGAATGGGTTCAAGCGTGTCTCTTCTTAGGTCTAAAAACGTGGTTTTACTAACTGTTCTAAGAAAGAATGTGTTTAATTCAGTGAAACAAAACAACACATCATAAGGATTTTTGGCACAAAACCTGTTCTCAGCTTTTACGTGTGCATATTTATATTCTTTTATTAGTGTCCACTGGGTTCGCAAATTTCTATTCTGTGTGTTAACAAAACTTACGTTTGAAAACTGTATTAACTGCCGGGCAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2875:HG4_PB_HySA_20215:HG4_PB_HySA_20214:HG4_PB_pbsv_13865:HG2_PB_pbsv_13884:HG2_PB_PB10Xdip_8644:HG2_PB_PB10Xdip_8643:HG3_Ill_MetaSV_1314:HG3_Ill_GATKHCSBGrefine_9160:HG4_Ill_MetaSV_1267:HG4_Ill_GATKHCSBGrefine_9551:HG2_Ill_MetaSV_1192:HG2_Ill_GATKHCSBGrefine_9263:HG2_PB_HySA_25282:HG3_PB_pbsv_13580:HG4_PB_SVrefine2PBcRDovetail_6918:HG3_PB_HySA_20915:HG4_PB_SVrefine2Falcon1Dovetail_8450:HG4_Ill_SVrefine2DISCOVARDovetail_9840:HG2_PB_SVrefine2PBcRplusDovetail_2730:HG2_PB_SVrefine2PB10Xhap12_10019:HG2_PB_SVrefine2Falcon2Bionano_6901:HG2_10X_SVrefine210Xhap12_9668:HG3_Ill_SVrefine2DISCOVARDovetail_9997:HG2_Ill_SVrefine2DISCOVARplusDovetail_3183:HG2_10X_SVrefine210Xhap12_9667;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9668:HG2_PB_SVrefine2Falcon2Bionano_6901:HG2_PB_SVrefine2PB10Xhap12_10019:HG2_PB_SVrefine2PBcRplusDovetail_2730:HG4_Ill_SVrefine2DISCOVARDovetail_9840:HG4_PB_SVrefine2Falcon1Dovetail_8450:HG4_PB_SVrefine2PBcRDovetail_6918;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0400348;ClusterMaxEditDist=0.234079;PBcalls=15;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=563;DistBack=-162;DistForward=-1;DistMin=-162;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=162;REFWIDENED=13:25096908-25097069;PctSeqSimilarity=0.9879;PctSizeSimilarity=1;PctRecOverlap=0.7584;SizeDiff=0;StartDistance=-136;EndDistance=-136;GTMatch=0;TruScore=91;MatchId=1389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:3:33:2:13:./.:2:8:0:7:0/1:3:17:./.:4:73:.:.:.
chr13	25311857	HG2_PB_SVrefine2Falcon2Bionano_6902	A	AATTTTATATATATATAAAATATATATATTATATATAAAATATATATATTATATATAAAATATATATATTATATATAATATATATATTATATATAATATATATATAATATATATAATATATATATAATATATAATATATATATTATATATATAGTATATATATAAAATATATACTATATAAAATATATATACTATATATATAATATATATTATATATAATATATAGTATAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6902:HG2_Ill_SVrefine2DISCOVARplusDovetail_3184:HG2_PB_HySA_25286:HG3_PB_pbsv_13583:HG2_Ill_breakscan11_4460:HG2_PB_PB10Xdip_8647:HG2_PB_PB10Xdip_8646:HG3_Ill_GATKHCSBGrefine_9165:HG2_Ill_manta_3814:HG2_Ill_GATKHCSBGrefine_9264:HG2_PB_pbsv_13886:HG2_PB_SVrefine2PBcRplusDovetail_2731:HG3_PB_SVrefine2Falcon1Dovetail_8405:HG3_Ill_SVrefine2DISCOVARDovetail_9998:HG4_PB_SVrefine2Falcon1Dovetail_8452:HG3_PB_SVrefine2PBcRDovetail_6572:HG2_PB_SVrefine2PB10Xhap12_10021;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6902:HG2_PB_SVrefine2PBcRplusDovetail_2731:HG2_PB_SVrefine2PB10Xhap12_10021;NumExactMatchSVs=3;ClusterMaxShiftDist=0.1959;ClusterMaxSizeDiff=0.1959;ClusterMaxEditDist=0.256522;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=230;DistBack=18010;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=261;REFWIDENED=13:25311858-25312118;PctSeqSimilarity=0.9708;PctSizeSimilarity=0.9783;PctRecOverlap=0.2727;SizeDiff=5;StartDistance=-165;EndDistance=-165;GTMatch=0;TruScore=74;MatchId=1390.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:54:1/1:3:26:1:20:./.:0:0:0:0:1/1:1:22:./.:.:.:.:.:.
chr13	25838886	HG3_PB_pbsv_13590	C	CATCTCAAAAAAAACTAAAACAAAAATACTTGGGAGGCGGAGCAAAGGAAGAAATGGAATGACCCTGGAGGTCGGAGCTTGACGAGTGACCGACGATCCCGCCACTGCCTCCAGCGCTGGGCGATCAGAGCGAGATGCGCGTCTCAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_pbsv_13590:HG3_PB_HySA_20928:HG2_PB_pbsv_13894:HG2_PB_SVrefine2Falcon2Bionano_6907;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_13590;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0668693;ClusterMaxSizeDiff=0.0668693;ClusterMaxEditDist=0.288288;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=162;DistBack=21882;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=13:25838887-25838911;PctSeqSimilarity=0.8721;PctSizeSimilarity=0.9529;PctRecOverlap=0.9474;SizeDiff=-8;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=92;MatchId=1391.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:19:./.:8:18:6:5:./.:3:1:14:0:./.:5:1:./.:.:.:.:.:.
chr13	26386629	HG2_PB_PB10Xdip_8660	AGATA	TTCTGAGACGTTGGATAGCCACAATATCTTTATTCTTTGATTATATTTGATTGGTAGATTAGCTGGGTATAAAATTCTAGGCTGAAATTCTTTTTCTGTCAGAATGCTATGTGTTGTTTAGCTTACTTCTGGTTGATTGGAAACTCAATGCAATTTTGATTCTCCATCTTTGGCATTTAGATTCTATTTTCTCTTTATGTTTAGTGTTCTGAAATTTACAAAGATATGTGTTTTTGTGGATATCCTTTTCTTAATGCGCTTTCAATCTAAAGACTGGTTTCCTTTAGTCTGGGAAATTTTCTTCTATTATTTTTTGGTAATATCCTCCTTTGCATTTTCTACATTCTGTCTCTCTACAACTTAGTCATATATTTAACCTTCTGGGTTTACATTCTAATCTTATCCTTTTACTGTCTTGGATATTTCCGTGACTTATCTTCTAGGTCCTCTATTGAGGATTGGGTTTTTATACTCTCTTTTTAATTTTCAAGTTCTTTTTTATGTCTTTTTTTCCCTACAAGCATTCTGATCTTAGTTTACAGATGTAATATCTTCTCCTATCTCTTTGAGGATATGAAATAAAATTTATTTAATGTTTTCTTTTGTTCTCTCATTCATCTCTGTTTTCTCTGTGTTCTTTCTTGTGAAAACTTCTCTTAAAAGCCCCAATGGGTGTGTTCAGTCTTTCTTTAATTAGCTCTTTTATTTATTAATTACATCATTTAACATCCATCTAGTAATGCAAATATTGAAATACTGAATGGCTAATACATTTCAGATGCTAGTAAAAGTAACATATGTTCACAGTAATTTGACCCTGTGATAAAATGTGAGAGTTTTTTTCATGGCTTATCTCTTTTATTTTCCTTTCCTGGAAGAATTTCCAGAAAACAATAGAATTTCTGTTGTTATGAAAACAGTAGAGAACAAACTTGTTAGCAAATGTAGATAATGAAAAGCACTATCCATCTCCTTTAAATTCTGTTGTGGAAAGGGATTTTACACTGTGCAAATACAAAGAATATTGTATTTTAACTATATATTTATTCATACTTGGATGATAATTAAGAGGACCTTCCATGGAATTAGCTGTGGATTTCTTTTCCAGGTGTTCATGATTGTGTCATATATTCAGGTTAAATCAGACATTAGCCTATTTAGTGAAATTCTAATGTATACAAGCATCTGCAGCAATAAAATATATTTTGAGGATTTTACTCCTCATAAAACACATTCCATGCTGTAATTATTTCCTTCAGCAGTTGCTGATTCCCTATCTATATTAGTATTCTTAGGCTTTTCAGCAGGATTGAAAAATATTTCTGTTGATTGTTCAGCTACTGTTCTGAAGTCATAAAAGTACACTTACAATAGACAACTTGCTATATCAATGCCTTAAAATTATTTTCAATAAATTATGGTATTTTCTGAATATTAATAATGCCATAATTAAGCATAAACAATAAAATGACCATGATAGTAGCTTGATTGCTAGGAATTTTTTAAGGCAATATTGCTTGTTCCTTCTGAAAATAAAAGCTGAGAGCAAAGAGAAAGGGGAAGGAGAAAGGAACAAGTATTCAAGAATGGTTTTCCACGTGAAACTGTGAGCTGAATGCACCAGCATCATCCACCTGCAGCTTTCTGGGGCCTGGGAGGGACACGTGGTGCTGACTGAGAGGTGGGGCTCCTGGTGCTGTTTCCCATTTCTGTCCTTGCAGGGGTCTTAGTGCTAAGCCTTTTGCAGCAGCTCCTAGTGTGGGCCCTTGAGGAAGCTGCCACTTCTGAGTGCCAGAAACTGATAGCCGGGATTGTGGGGTCTAACAGCTGGGACGAAGGGCCAAGGAGGAGAGTGCTTTTACCATGGGCGGCACAGGTTGGGCTTTGTTTGTCTCATGTCATTTTTGATCTGTTGGACAGACAGGGCTATTGAGCCAGCTTGACCTCTTCTGTAACCTCTTCCCCACTGCCATTCTCAGCAATGGCTCTGGAGGAGGTCATGCTTCCTGATTGTGGCCAGTCATGTCTGATGAAGTCTCTGTCCCAGAATAAATACTTACTTAGGGTTAAAATAGAGGAGCCATAAACTTTAGGTACCGTTTATGAAATGTATTGCAAAGTCCCTTTTCTTTGCTTCTGTCCTTGCCCTTGACCTTTAAGTGTTGCTGTCGCCCAGAGGCCCACCATGGATTTCCTCTTGCCTCCTTACATAAGTTCCCTTGCTGGAGACTTCCACTGCTGTGGTTATAGCATATTTGCCAATGTTACAAACATTTTTCTTATCAGAAACTCTCCCCTGAGCATCAGCCTTGTGCTGTGGATTTTTTCCTGGAGAGCCCACAGGTACTGTGCCTTAAACATACCCCCAAAATACATTCATCTACCACTTGGCGCTCTCCCTCCCGAGCTTCACCTTTGGTTGTGTTTGTTGCCATCTTTCCTGTCTCCTATCAGAAAATGCCTGGAGTCATTCTTTGCTGCCACCCTATATCAGGTCCATCAGCCAGGACCTCTCAGGATCTTTCTTCAAGACTAATCCCAGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCTTGTCTCAGCCTCCCAAGTAGCTGGGATTAAAGGCATGTACCACTGTTCCTGGCCCATGTGGGATTCCTGCCTCTCCTGACACTCCAGCCTGCTCCCAAACATTTCTGTTTAGGTAATTAACAATTATCTAACAAGTAATTAACAAATACTTTCACAAGTCAGTGGTTAGGTTAGACTTACAAAAACTGTCAGTGAATCATGCTACCCCCACCCCACTACCTTGATGTAGTTGCCCTGTGTTCCCAGTTGCTTTGAGAAAGCAGATTCAAGAGCAGAAAGCATTCCTAAGGACAGATGAACTTTCCACGAGAGTCCATTTGTAGTGGTCCACTTCCGTGGTACTCTGGGCCCTCCCTCCCCACCTCCCTCTCCAGAGCCCACATTTCCCAGTTTACAAAAGGAAGGAATACATCTCACTTCTTCAAGTCTTTACTGTGGTGTATGCATCATGATACAAAAAATCTTAGGGATACAAACCAATGAGACAACATTTAGTGGAAAAAAAAAAAAAAGAAAAGACTGCCTATGTTTATTATATCTGGACCCTGATAGGATATTTATCTTCTGTCAGGGAGTTGAGACAGTATCTATTCAGCTGTACAATACACCCTCTCACCATACACAATGGTCAGCGATACCTTGCTCCTGAGCAAAAGTCCAAAGAAACTGCCAGTGAGAAACATGGGAGGCAGCTGCCTCTGATATCGTGGAGACACCAAGGTCATGGCCAGACTGTTCATCAGATCCATCTGTGTCTATGAGTGGAAGCTCAGAAGCAAAAGAGTCATCATGGCATGTTTATTAACATGTGCATTGTAGTTGAAATATGAAATCAGAGTCTTTTTTTATGATTTAACTGATTGGTTAGAAAGTGAAGACAGAGGTGTTGTCAGAGTGTGGCAAAAATTTTCCAAAACTTGAATGAGCTAAATCTGCAACTGTAGGGTTTGAAAGAGCACTTAAGGCATGTGACACAGTGACTGTGATATGTTGGAGAGAACCTTTTTCACAAAGAATACAATGTGAGCAAGCTTAGCCCTGTGTGATAAGAGAAAACTATTTTATCAAATGGCAATGAAGTAGCAAGAGGCTATTACAAATGAAACAATTTTACTTTCCTCAAACTTTGCTGAGTGTACTGAGTGAAAAAAGATAAATCTAAATGAGACCATAGCAGGGATAATTAAAGGTCATTTGAAACTTCTTGGTATACCTCTAGATATACTTCTCAGAAGTTAAGAAAGTAAATGATTCTTGTGACTAATTAACAACTATTTTCACTAGTCAGTGGTTTCTGTTTCTTTGCTTTTTAGAAAATTTAGAAAACGACCTAATCACGATGTCAGCAGATAGAAGATTTCAAATAACTTTGCAATACAGCACCATATTATTTTTGGCATACGGTTC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8413:HG3_PB_pbsv_13595:HG2_PB_pbsv_13898:HG4_PB_pbsv_13880:HG4_PB_SVrefine2PBcRDovetail_6924:HG4_PB_SVrefine2Falcon1Dovetail_8457:HG2_PB_SVrefine2Falcon2Bionano_6910:HG2_10X_SVrefine210Xhap12_9673:HG3_Ill_SVrefine2DISCOVARDovetail_10005:HG4_Ill_SVrefine2DISCOVARDovetail_9852:HG2_Ill_SVrefine2DISCOVARplusDovetail_3188:HG2_PB_SVrefine2PBcRplusDovetail_2737:HG2_PB_SVrefine2PB10Xhap12_10030:HG2_PB_PB10Xdip_8660:HG2_PB_PB10Xdip_8659:HG2_PB_SVrefine2Falcon1plusDovetail_2882;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_8659:HG2_PB_PB10Xdip_8660:HG2_PB_SVrefine2PB10Xhap12_10030:HG2_PB_SVrefine2PBcRplusDovetail_2737;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0353829;ClusterMaxSizeDiff=0.0343932;ClusterMaxEditDist=0.192744;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=3978;DistBack=0;DistForward=12649;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:26386634-26386628;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9997;PctRecOverlap=0.999;SizeDiff=-1;StartDistance=0;EndDistance=4;GTMatch=0;TruScore=99;MatchId=1392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:85:1/1:0:37:1:13:1/1:0:15:0:12:1/1:0:39:1/1:1:353:.:3974:.
chr13	26452619	HG3_Ill_GATKHCSBGrefine_9176	A	AGCAGCCCCAAGGGCTGCTGGTTGCCCATTTTTATGGTTATTTCTTGAGTATATGCTAAACAAGGGGTGGATTATTCATGCCTCCCCTTTTTAGACCACATAGAGTAACTTCCTGACGTTGCCATGGCATTTGTAAACTATCGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9674:HG2_PB_pbsv_13899:HG2_Ill_breakscan11_4461:HG3_PB_pbsv_13596:HG2_PB_HySA_25316:HG3_PB_HySA_20934:HG3_Ill_svaba_17491:HG3_Ill_manta_3139:HG3_Ill_Spiral_14430:HG3_Ill_MetaSV_1320:HG3_Ill_GATKHCSBGrefine_9176:HG2_PB_SVrefine2Falcon2Bionano_6911:HG2_PB_SVrefine2Falcon1plusDovetail_2883:HG2_Ill_svaba_17335:HG2_Ill_SVrefine2DISCOVARplusDovetail_3189:HG2_Ill_MetaSV_1196:HG2_Ill_GATKHCSBGrefine_9271;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9674:HG3_Ill_svaba_17491:HG3_Ill_manta_3139:HG3_Ill_Spiral_14430:HG3_Ill_MetaSV_1320:HG3_Ill_GATKHCSBGrefine_9176:HG2_PB_SVrefine2Falcon2Bionano_6911:HG2_PB_SVrefine2Falcon1plusDovetail_2883:HG2_Ill_svaba_17335:HG2_Ill_SVrefine2DISCOVARplusDovetail_3189:HG2_Ill_MetaSV_1196:HG2_Ill_GATKHCSBGrefine_9271;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0544218;ClusterMaxEditDist=0.208054;PBcalls=6;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=143;DistBack=16;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=13:26452620-26452621;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1393.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:28:0|1:24:1:4:24:1|0:0:7:13:0:0/1:23:14:./.:.:.:.:.:.
chr13	26816254	HG2_PB_SVrefine2Falcon1plusDovetail_2884	A	AGGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCTCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	10	PASS	ClusterIDs=HG3_PB_pbsv_13598:HG2_PB_pbsv_13901:HG3_PB_assemblyticsfalcon_6671:HG4_PB_assemblyticsfalcon_6575:HG3_PB_SVrefine2Falcon1Dovetail_8414:HG4_PB_SVrefine2Falcon1Dovetail_8458:HG2_PB_PB10Xdip_8661:HG2_PB_assemblyticsPBcR_6433:HG2_PB_SVrefine2PBcRplusDovetail_2738:HG2_PB_SVrefine2PB10Xhap12_10031:HG2_PB_SVrefine2Falcon2Bionano_6912:HG2_PB_SVrefine2Falcon1plusDovetail_2884:HG2_PB_HySA_25319;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2884:HG2_PB_SVrefine2Falcon2Bionano_6912;NumExactMatchSVs=2;ClusterMaxShiftDist=0.13099;ClusterMaxSizeDiff=0.127796;ClusterMaxEditDist=0.175719;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=318;DistBack=36894;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=13:26816255-26816264;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1394.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:31:0|1:18:4:6:26:./.:0:2:30:0:0/1:13:8:0/1:9:38:.:.:.
chr13	28639671	HG3_PB_SVrefine2Falcon1Dovetail_8429	C	CGGGAGGCTGAGGCAGGAGGATTGCTTGAGCCTAGGAGGTTGAGGCTGAAGTGAGCTATGTTTGTGTCACTGCACTCCAGCCTGGACAACGGAGTGAGATCTTGTCTCAAAGTAATAATAATAATAATAATAATAATAATAATAATCCAGGTGTGGTGGCTCACGCCTGTAATCCCAGCACTTT	10	PASS	ClusterIDs=HG4_PB_HySA_20272:HG2_PB_pbsv_13919:HG2_PB_HySA_25360:HG3_PB_pbsv_13619:HG2_PB_PB10Xdip_8702:HG2_PB_PB10Xdip_8701:HG2_PB_HySA_25359:HG4_PB_pbsv_13900:HG4_PB_SVrefine2Falcon1Dovetail_8472:HG3_PB_SVrefine2Falcon1Dovetail_8429:HG2_PB_SVrefine2Falcon2Bionano_6925:HG2_PB_SVrefine2Falcon1plusDovetail_2895:HG2_PB_SVrefine2PBcRplusDovetail_2749:HG2_PB_SVrefine2PB10Xhap12_10044;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6925:HG3_PB_SVrefine2Falcon1Dovetail_8429:HG4_PB_SVrefine2Falcon1Dovetail_8472;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0698925;ClusterMaxSizeDiff=0.0434783;ClusterMaxEditDist=0.301075;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=183;DistBack=53877;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=397;REFWIDENED=13:28639672-28640068;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9836;PctRecOverlap=0.3716;SizeDiff=3;StartDistance=-114;EndDistance=-114;GTMatch=0;TruScore=78;MatchId=1395.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:./.:1:11:0:2:./.:2:5:3:12:./.:3:37:./.:.:.:.:.:.
chr13	29158946	HG2_PB_SVrefine2PBcRplusDovetail_2752	C	TCCTCTCCCTCTGCATGGAATCAATAGCCAAGTCCTTCCTAACCTCCGTTCTCTTTGTTCCTCTCCCTCCCTTCCCTATTTCTTATTAGGCCTTTCTCACCATCCTCACAGGCAACACAGCAATAGCAGCTGTGAGTCTCCTGTCTGCCCAAGAAGGTGCCCCCTCATCAGGAAGCCGGCTCTCCTCTCACACCAGCTGGCAGGGGCCTCTCCAACCCCTGAGCTCCAAGCACACATGGCTTCCACATTCCTGTGACACGTGCCACAGTCAGCCTGGCATTGCGGTGTCTGAGCACCTGTCATTGCATCTGTGCTGAATCAGGCACTGTGAGTGCAAGGCCAGGCCCCGTGGACTTGGGTTCCCACGGGCACCTGGCAGGTTGTGGGAAGTGCTCGTTCCATCCGGAATGTGGACTTCAGGAAAGGACACCCCAACATATGCTGCTTTGGTATGCTGCTTTCTTTGCACTTAGGGCACTTGGAGAACAGCAAAGGCAGCAGGGAGCTCTCTCTGAGGTCCCCTTATTTGCCTAAAGACAAGAGCCTCCGAAAGGGATTCTCACCAACCAGGGAAGATTAAGCACGAATCAGAGGAGAGGAGTCTGGAGGCCACACTACACCCAGACATAGACTTGTCACAGGCTGTCCCCTGTTCTTCTGAGGGCCCGTTCATCTTCCCCAAAATCATTTACTCTCCCCCAAGTTGCCTGCATTCCCCCTCCACTCTCCCCTGTGGAGCCGGTGTCTAAACTCCTAGATCTCGCTGGGCTTGGGGTGCTCACTTTTCCTTCCTCTGATGCCCGTGTGCATATAATACATTTGTATCTCTTTTTTCCTGATAATCTGTCTGTTGTCAGTTTATTTCACAGACTCAGATCTCCAACTCTCTAGAGGGAAAGTTTTCCCTTTCCTACAAATGTAATGACAAAAACAGCATGTACCAAATGGGCTAACAAATGAATGAAAACATTTTATCCCACACATTTCCTCCTATGAAGCCACCAAGAG	20	PASS	ClusterIDs=HG2_PB_pbsv_13921:HG3_Ill_Spiral_14449:HG2_PB_PB10Xdip_8707:HG2_PB_PB10Xdip_8706:HG2_Ill_breakscan11_4464:HG3_PB_SVrefine2Falcon1Dovetail_8430:HG3_Ill_SVrefine2DISCOVARDovetail_10020:HG2_PB_SVrefine2PBcRplusDovetail_2752:HG2_PB_SVrefine2PB10Xhap12_10047:HG2_PB_SVrefine2Falcon2Bionano_6926:HG2_Ill_SVrefine2DISCOVARplusDovetail_3203:HG2_10X_SVrefine210Xhap12_9684:HG4_PB_SVrefine2PBcRDovetail_6935:HG3_Ill_MetaSV_1327:HG3_Ill_GATKHCSBGrefine_9191:HG2_PB_SVrefine2PBcRplusDovetail_2751:HG2_PB_SVrefine2Falcon1plusDovetail_2897:HG2_Ill_MetaSV_1204:HG4_PB_SVrefine2Falcon1Dovetail_8473:HG4_Ill_SVrefine2DISCOVARDovetail_9864:HG4_Ill_MetaSV_1276:HG4_Ill_GATKHCSBGrefine_9578:HG4_PB_pbsv_13901:HG2_PB_HySA_25361:HG4_PB_HySA_20274:HG3_PB_pbsv_13621;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9684:HG2_Ill_SVrefine2DISCOVARplusDovetail_3203:HG2_PB_SVrefine2Falcon2Bionano_6926:HG2_PB_SVrefine2PB10Xhap12_10047:HG2_PB_SVrefine2PBcRplusDovetail_2752:HG3_Ill_SVrefine2DISCOVARDovetail_10020;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0440744;ClusterMaxSizeDiff=0.0391773;ClusterMaxEditDist=0.160627;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=1007;DistBack=-1;DistForward=2592;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:29158947-29158945;PctSeqSimilarity=0.999;PctSizeSimilarity=0.998;PctRecOverlap=0.998;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1396.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:24:0:14:1/1:0:16:1:12:1/1:0:29:0/1:20:118:.:1070:.
chr13	29538875	HG2_Ill_MetaSV_1205	G	GCTTTTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGGTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTTGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8431:HG3_PB_pbsv_13623:HG3_PB_HySA_20962:HG2_PB_pbsv_13923:HG2_Ill_breakscan11_4465:HG4_PB_SVrefine2Falcon1Dovetail_8475:HG2_Ill_MetaSV_1205:HG3_Ill_SVrefine2DISCOVARDovetail_10021:HG2_PB_SVrefine2Falcon2Bionano_6927;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_MetaSV_1205;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0517504;ClusterMaxSizeDiff=0.0395738;ClusterMaxEditDist=0.229851;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=324;DistBack=34877;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:29538876-29538890;PctSeqSimilarity=0.9954;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1398.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:31:0|1:24:3:6:28:0|1:25:0:0:5:0/1:24:12:0/1:10:32:.:.:.
chr13	29564764	HG3_Ill_250bpfermikitraw_18053	T	TGCACCAATCAGCAGTCTGTAAAAAATGCACCAATCAGTGCTCTGTGCCTAGCTAAAGGATTGTAAAC	20	PASS	ClusterIDs=HG2_PB_pbsv_13924:HG3_Ill_svaba_17513:HG3_PB_pbsv_13624:HG3_Ill_scalpel_13360:HG3_Ill_manta_3144:HG3_Ill_Spiral_14453:HG3_Ill_Krunchall_18541:HG3_Ill_GATKHC_22122:HG3_Ill_GATKHCSBGrefine_9193:HG3_Ill_250bpfermikitraw_18053:HG3_Ill_150bpfermikitraw_17543:HG2_PB_assemblyticsPBcR_6457:HG2_Ill_svaba_17353:HG2_Ill_scalpel_13100:HG2_Ill_SpiralSDKrefine_4166:HG2_Ill_Krunchall_18884:HG2_Ill_GATKHC_22227:HG2_Ill_GATKHCSBGrefine_9286:HG2_Ill_250bpfermikitraw_18571:HG2_Ill_150bpfermikitraw_17493:HG3_PB_HySA_20964:HG2_PB_HySA_25368:HG2_PB_PB10Xdip_8710:HG2_PB_PB10Xdip_8711;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17493:HG2_Ill_250bpfermikitraw_18571:HG2_Ill_GATKHCSBGrefine_9286:HG2_Ill_GATKHC_22227:HG2_Ill_Krunchall_18884:HG2_Ill_SpiralSDKrefine_4166:HG2_Ill_scalpel_13100:HG2_Ill_svaba_17353:HG2_PB_assemblyticsPBcR_6457:HG3_Ill_150bpfermikitraw_17543:HG3_Ill_250bpfermikitraw_18053:HG3_Ill_GATKHCSBGrefine_9193:HG3_Ill_GATKHC_22122:HG3_Ill_Krunchall_18541:HG3_Ill_Spiral_14453:HG3_Ill_manta_3144:HG3_Ill_scalpel_13360:HG3_Ill_svaba_17513;NumExactMatchSVs=18;ClusterMaxShiftDist=0.10219;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.241135;PBcalls=7;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=67;DistBack=15142;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=241;REFWIDENED=13:29564558-29564798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1399.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:41:0|1:18:5:2:38:./.:22:0:3:11:0/1:28:28:./.:.:.:.:.:.
chr13	34811550	HG4_Ill_150bpfermikitraw_17695	G	GTGGATTTGATGAAGTGCTCTGCCTGTATCATCTGCATTTTATCACTGCGTCGGCGTCAGCCAAACCCTCTTCCCTGATCAGAAC	20	PASS	ClusterIDs=HG2_PB_HySA_25437:HG2_PB_pbsv_13959:HG3_PB_pbsv_13654:HG2_Ill_breakscan11_4466:HG2_PB_PB10Xdip_8749:HG2_PB_PB10Xdip_8748:HG4_Ill_svaba_17423:HG4_Ill_manta_3272:HG4_Ill_Krunchall_19252:HG4_Ill_250bpfermikitraw_18372:HG4_Ill_150bpfermikitraw_17695:HG3_PB_assemblyticsfalcon_6757:HG3_Ill_svaba_17560:HG3_Ill_Spiral_14487:HG3_Ill_Krunchall_18584:HG3_Ill_GATKHC_22177:HG3_Ill_250bpfermikitraw_18098:HG3_Ill_150bpfermikitraw_17586:HG2_PB_assemblyticsPBcR_6517:HG2_Ill_svaba_17396:HG2_Ill_manta_3843:HG2_Ill_Krunchall_18947:HG2_Ill_GATKHC_22292:HG2_Ill_250bpfermikitraw_18616:HG2_Ill_150bpfermikitraw_17546;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17546:HG2_Ill_250bpfermikitraw_18616:HG2_Ill_GATKHC_22292:HG2_Ill_Krunchall_18947:HG2_Ill_manta_3843:HG2_Ill_svaba_17396:HG2_PB_assemblyticsPBcR_6517:HG3_Ill_150bpfermikitraw_17586:HG3_Ill_250bpfermikitraw_18098:HG3_Ill_GATKHC_22177:HG3_Ill_Krunchall_18584:HG3_Ill_Spiral_14487:HG3_Ill_svaba_17560:HG3_PB_assemblyticsfalcon_6757:HG4_Ill_150bpfermikitraw_17695:HG4_Ill_250bpfermikitraw_18372:HG4_Ill_Krunchall_19252:HG4_Ill_manta_3272:HG4_Ill_svaba_17423;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0809249;ClusterMaxSizeDiff=0.0578035;ClusterMaxEditDist=0.170455;PBcalls=7;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=13:34811551-34811558;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:1:22:1:22:1/1:0:29:1:31:1/1:0:35:./.:.:.:.:.:.
chr13	35787524	HG2_PB_pbsv_13963	C	CGCGGGCCGGGCCGCGGTGGCTTCACGCCTGTAATCCAGCACTTTGGAGGCCGAGGCGGTGATCACGAGGTCAGGAGATCGAGACATCCCGGCTAAAAAACGGTTGGAAACCCGTCTCTATAAAAATACAAAAAATTAGCCGGGCGTATAGTGCGGGCGCCCTGTAGTCGCCAGCTACTTGGGAGGCTGGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTCCCGCCCCCCCCACTGGGGCACTCCAGCCTGGGGCGACAGAAGCGAGAACTCCGGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATCTTTCTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2918:HG2_PB_pbsv_13963:HG3_PB_pbsv_13658:HG2_Ill_breakscan11_4467;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_13963;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0854197;ClusterMaxSizeDiff=0.0854197;ClusterMaxEditDist=0.173785;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=353;DistBack=-1;DistForward=23018;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=13:35787525-35787524;PctSeqSimilarity=0.9482;PctSizeSimilarity=0.9547;PctRecOverlap=0.9462;SizeDiff=16;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=94;MatchId=1402.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:16:0|1:24:1:0:15:1|0:0:7:16:0:0/1:29:6:0/1:9:11:.:.:.
chr13	36325330	HG4_PB_HySA_20344	C	CCCATTGGATCTTTTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTTAATTTATTTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGATTTGGCAGGGTCATGGGACAATAGTGAGGGAAGGGTCAGCAGATTAAACAATGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCTGATTTATTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTGCACCGCCTTAATCCATTTAACCCTGAGTGGACACAGGCACATGTTTCAGAGAGCACACAGGGTTGGGGGTAAGGTCACAGAATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTGCAGAACAAAATGAAAAAGTCTCTCCCATGTCTACTTCTTTCTACACAGAACAGGCAACCATCCGATTTCTCAATCTTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCAAGCCTTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTTCCCAGACGGGGTGGTGGCCGGGCAAGGGGCTCCTCACTTCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCAGAGCGGGGCGGCTGGCCGGGCGGAGGCTGACCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACTCCCTCCCGGACGGGCGGCTGGCCGGGCCGGGGGCTGACGCCCCATCTCCCTCCTGGACGGGTGGGTGGCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGTTGGCTGGCCGGCGCGGGGTGCTGACCCCCCCCACCCTCCCTCCCGGATGGCACGGCTGGCCAGGGCGGGGCTGACCCCCCACCCCTCCTACCCGGACGTGTATTCCTGGCCGGCGGGGGGGGCTGACCCACCCCACCTCCCTCCGGGACGGGGTGGCTGCCGGCGGAGATGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTCGCCGTGTGGAGGGGGCTCCTCACTTCTCAGACGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTTCTCAGATGTGGGGGACCGGGCAGAGACGCTCCTCACCTCCCAGACGGCGGGTCTCGGCCGGGCAGAGGCGCTCCTCACGTCCCAGAGGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCATTCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCCTTCCTAGATGGGATGGCGCCGGGCGGAGATGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGCTCCTCACATCCCAGACGATGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTAGGTTTGTAGTGAGCCGAAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTCAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6960:HG2_PB_HySA_25448:HG4_PB_HySA_20344:HG4_PB_pbsv_13939:HG2_PB_pbsv_13964:HG2_PB_assemblyticsPBcR_6529:HG2_Ill_breakscan11_4468:HG4_PB_HySA_20343:HG2_PB_HySA_25447:HG2_PB_SVrefine2Falcon1plusDovetail_2919:HG2_PB_SVrefine2PBcRplusDovetail_2776:HG2_PB_SVrefine2Falcon2Bionano_6944;NumClusterSVs=12;ExactMatchIDs=HG4_PB_HySA_20344;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0768761;ClusterMaxSizeDiff=0.0768761;ClusterMaxEditDist=0.188714;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1621;DistBack=-12;DistForward=10485;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=13:36325331-36325331;PctSeqSimilarity=0.9757;PctSizeSimilarity=0.9969;PctRecOverlap=0.9963;SizeDiff=5;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=98;MatchId=1403.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:24:0|1:28:0:0:23:./.:36:0:3:14:0/1:31:11:0/1:60:54:.:1676:.
chr13	37368801	HG2_Ill_250bpfermikitraw_18640	T	TACACACCTATTTTTAATGAATATATTTCTTTGGCAGGAAAGTATATAGAAGAACAGTATATAGAAGAAAGTATATAGAAGA	20	PASS	ClusterIDs=HG4_PB_HySA_20353:HG3_PB_pbsv_13667:HG3_PB_HySA_21059:HG2_PB_pbsv_13973:HG2_PB_PB10Xdip_8775:HG2_PB_PB10Xdip_8774:HG4_PB_SVrefine2PBcRDovetail_6964:HG4_PB_SVrefine2Falcon1Dovetail_8500:HG4_Ill_SVrefine2DISCOVARDovetail_9893:HG4_Ill_Krunchall_19277:HG4_Ill_250bpfermikitraw_18392:HG3_PB_SVrefine2PBcRDovetail_6593:HG3_PB_SVrefine2Falcon1Dovetail_8451:HG3_Ill_SVrefine2DISCOVARDovetail_10049:HG3_Ill_250bpfermikitraw_18115:HG2_PB_SVrefine2PBcRplusDovetail_2780:HG2_PB_SVrefine2PB10Xhap12_10082:HG2_PB_SVrefine2Falcon2Bionano_6948:HG2_PB_SVrefine2Falcon1plusDovetail_2923:HG2_Ill_SVrefine2DISCOVARplusDovetail_3232:HG2_Ill_250bpfermikitraw_18640:HG2_PB_HySA_25461;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18640:HG2_Ill_SVrefine2DISCOVARplusDovetail_3232:HG2_PB_SVrefine2Falcon1plusDovetail_2923:HG2_PB_SVrefine2Falcon2Bionano_6948:HG2_PB_SVrefine2PB10Xhap12_10082:HG2_PB_SVrefine2PBcRplusDovetail_2780:HG3_Ill_250bpfermikitraw_18115:HG3_Ill_SVrefine2DISCOVARDovetail_10049:HG3_PB_SVrefine2Falcon1Dovetail_8451:HG3_PB_SVrefine2PBcRDovetail_6593:HG4_Ill_250bpfermikitraw_18392:HG4_Ill_Krunchall_19277:HG4_Ill_SVrefine2DISCOVARDovetail_9893:HG4_PB_SVrefine2Falcon1Dovetail_8500:HG4_PB_SVrefine2PBcRDovetail_6964;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0736196;ClusterMaxSizeDiff=0.0598802;ClusterMaxEditDist=0.214286;PBcalls=15;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=81;DistBack=-81;DistForward=2;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=138;REFWIDENED=13:37368802-37368939;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:1/1:1:18:1:8:./.:6:16:7:14:0/1:6:27:./.:.:.:.:.:.
chr13	37854905	HG2_Ill_GATKHC_22316	G	GGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGT	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_6773:HG3_PB_assemblyticsfalcon_6779:HG2_PB_pbsv_13976:HG2_PB_PB10Xdip_8781:HG4_PB_pbsv_13950:HG2_PB_PB10Xdip_8780:HG4_Ill_scalpel_12861:HG4_Ill_GATKHC_22297:HG4_Ill_GATKHCSBGrefine_9614:HG4_Ill_250bpfermikitraw_18399:HG4_Ill_150bpfermikitraw_17720:HG3_Ill_scalpel_13415:HG3_Ill_Spiral_14506:HG3_Ill_GATKHC_22201:HG3_Ill_GATKHCSBGrefine_9228:HG3_Ill_250bpfermikitraw_18118:HG3_Ill_150bpfermikitraw_17609:HG2_Ill_scalpel_13158:HG2_Ill_GATKHC_22316:HG2_Ill_GATKHCSBGrefine_9318:HG2_Ill_250bpfermikitraw_18643:HG2_Ill_150bpfermikitraw_17573:HG2_PB_assemblyticsPBcR_6546:HG4_PB_HySA_20358:HG2_PB_HySA_25467;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17573:HG2_Ill_250bpfermikitraw_18643:HG2_Ill_GATKHCSBGrefine_9318:HG2_Ill_GATKHC_22316:HG2_Ill_scalpel_13158:HG3_Ill_150bpfermikitraw_17609:HG3_Ill_250bpfermikitraw_18118:HG3_Ill_GATKHCSBGrefine_9228:HG3_Ill_GATKHC_22201:HG3_Ill_Spiral_14506:HG3_Ill_scalpel_13415:HG4_Ill_150bpfermikitraw_17720:HG4_Ill_250bpfermikitraw_18399:HG4_Ill_GATKHCSBGrefine_9614:HG4_Ill_GATKHC_22297:HG4_Ill_scalpel_12861;NumExactMatchSVs=16;ClusterMaxShiftDist=0.252427;ClusterMaxSizeDiff=0.213592;ClusterMaxEditDist=0.349515;PBcalls=9;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=41;DistForward=26;DistMin=26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=161;REFWIDENED=13:37854772-37854932;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1405.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:1/1:2:19:2:20:./.:1:5:1:4:1/1:1:26:./.:.:.:.:.:.
chr13	38226812	HG3_Ill_svaba_17589	G	GTGAAGAGAATTGTACATATTGTTTCCTGCAGGCATGGAGAATGGGACTCAGCATTGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9717:HG4_PB_HySA_20364:HG2_PB_pbsv_13978:HG2_PB_PB10Xdip_8783:HG3_PB_pbsv_13674:HG2_PB_PB10Xdip_8782:HG4_PB_pbsv_13954:HG3_PB_HySA_21066:HG2_PB_HySA_25472:HG4_Ill_svaba_17458:HG4_Ill_manta_3277:HG4_Ill_Krunchall_19288:HG4_Ill_GATKHC_22301:HG4_Ill_GATKHCSBGrefine_9617:HG4_Ill_250bpfermikitraw_18404:HG4_Ill_150bpfermikitraw_17724:HG3_Ill_svaba_17589:HG3_Ill_Krunchall_18608:HG3_Ill_GATKHC_22205:HG3_Ill_GATKHCSBGrefine_9230:HG3_Ill_250bpfermikitraw_18121:HG3_Ill_150bpfermikitraw_17612:HG2_Ill_svaba_17426:HG2_Ill_manta_3852:HG2_Ill_Krunchall_18976:HG2_Ill_GATKHC_22320:HG2_Ill_GATKHCSBGrefine_9320:HG2_Ill_250bpfermikitraw_18647:HG2_Ill_150bpfermikitraw_17579:HG4_PB_SVrefine2PBcRDovetail_6966:HG4_PB_SVrefine2Falcon1Dovetail_8506:HG4_Ill_SVrefine2DISCOVARDovetail_9898:HG3_PB_SVrefine2PBcRDovetail_6599:HG3_PB_SVrefine2Falcon1Dovetail_8457:HG3_Ill_SVrefine2DISCOVARDovetail_10056:HG2_PB_SVrefine2PBcRplusDovetail_2784:HG2_PB_SVrefine2PB10Xhap12_10087:HG2_PB_SVrefine2Falcon2Bionano_6952:HG2_PB_SVrefine2Falcon1plusDovetail_2926:HG2_Ill_SVrefine2DISCOVARplusDovetail_3236;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17579:HG2_Ill_250bpfermikitraw_18647:HG2_Ill_GATKHCSBGrefine_9320:HG2_Ill_GATKHC_22320:HG2_Ill_Krunchall_18976:HG2_Ill_manta_3852:HG2_Ill_svaba_17426:HG3_Ill_150bpfermikitraw_17612:HG3_Ill_250bpfermikitraw_18121:HG3_Ill_GATKHCSBGrefine_9230:HG3_Ill_GATKHC_22205:HG3_Ill_Krunchall_18608:HG3_Ill_svaba_17589:HG4_Ill_150bpfermikitraw_17724:HG4_Ill_250bpfermikitraw_18404:HG4_Ill_GATKHCSBGrefine_9617:HG4_Ill_GATKHC_22301:HG4_Ill_Krunchall_19288:HG4_Ill_manta_3277:HG4_Ill_svaba_17458;NumExactMatchSVs=20;ClusterMaxShiftDist=0.118644;ClusterMaxSizeDiff=0.101695;ClusterMaxEditDist=0.276423;PBcalls=16;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=57;DistBack=-49;DistForward=45491;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=13:38226806-38226865;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1406.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:2:26:1:22:./.:3:27:2:25:1/1:0:53:./.:.:.:.:.:.
chr13	38578967	HG4_Ill_SVrefine2DISCOVARDovetail_9901	A	AATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG3_PB_HySA_21073:HG3_PB_pbsv_13675:HG2_PB_pbsv_13979:HG4_Ill_SVrefine2DISCOVARDovetail_9901:HG4_PB_pbsv_13956;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_9901;NumExactMatchSVs=1;ClusterMaxShiftDist=0.126126;ClusterMaxSizeDiff=0.126126;ClusterMaxEditDist=0.210526;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=15473;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=13:38578968-38578992;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1407.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:1|0:2:27:27:4:./.:11:2:0:1:0/1:18:7:./.:.:.:.:.:.
chr13	39530939	HG2_PB_PB10Xdip_8786	A	AGTTATAATATAGTATAGAACTATATACAATATATAGTTATATATATAGTATAGAACTATATACAATATATAGTTATATATATAGTATATAACTATATATAATATATAGTTATATACTATATAACTATATATAATATATAGTTATATAGTATATAACTATATATAATATATAGTTATATACTATATAACTATATATTATATATAGTTATATACTATATAACTATATATTATATATAGTTATATTATGTATAGTTATATAGTATATAACTATATATAATATATAGTTATATAATATATAACTATATATAATATATAGTTATATAATATATAACTATATATAATATATAGTTATATATATTGTATATAACTATGTGTAATATATAGTTATATATATTGTATATAACTATGTGTAATATATAGTTCTATATATTGTATATAATAACTATGTGTAATATATAGTTATATATATTGTATATAATAACTATGTGTAATATATAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATAGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATACACAGTTATATATATTGTATATAACTATGTGTAATATACAGTTATATATATTGTATATAACTATGTGTAATATATAGTTATATATAGTATATAACTATGTGTAATATATAGTTATATATATTGTATATAACTATGTGTAATATATAGTTATATATATTGTATATAACTATGTGTAATATATAGTTATATATATTGTATATAACTATGTGTAATATATGGTTATATATATTGTACATAACTATGTGTAATATATGGTTATATATATTGTACATAACTATGTGTAATATATGGTTATATATTGTACATAACTATATGTAATATATGGTTATATATATTGTACATAACTATATATAATATATGGTTATATATATTGTACATAACTATATATAATATATGGTTATATATTGTACATAACTATATATAATATATGGTTATATATTGTACATAACTATATATAATATATGGTTATATATATTGTACATAACTATATATAATATATGGTTATATATATTGTACATAACTATATATAATATATGGTTATATATATTGTACATAACTATATATAATATATGGTTATATATATTGTACATAACTATATATAATATATGGTTATATATATTGTATATAACTATATATAATATATGGTTATATATATTGTATATAACTATATATAATATATGGTTATATATAGTATATAACTACATATAATATATGGTTATATATATTGTATATAACTACATATAATATATGGTTATATATATTGTATATAACTACATATAATATATGGTTATATATATTGTATATAACTACATATAATATATGGTTATATATATTGTATATAACTATATATAATATATGGTTATATATATTGTATATAACTATATATAATATATGGTTATATATATTGTATATAACTATATATAATATATGGTTATATATATTGTATATAACTATATATAATATATGGTTATATATATTGTATATAACTATATATAATATATGGTTATATATATTGTATATAACTATATATAATATATG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8512:HG2_PB_pbsv_13982:HG3_PB_pbsv_13678:HG2_PB_PB10Xdip_8787:HG2_PB_PB10Xdip_8786:HG2_PB_HySA_25485:HG3_PB_SVrefine2Falcon1Dovetail_8460:HG2_PB_SVrefine2Falcon2Bionano_6955:HG2_PB_SVrefine2PBcRplusDovetail_2789:HG2_PB_SVrefine2PB10Xhap12_10093:HG3_PB_SVrefine2PBcRDovetail_6603:HG2_PB_SVrefine2Falcon1plusDovetail_2929;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_8786:HG2_PB_PB10Xdip_8787;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0825185;ClusterMaxSizeDiff=0.0806105;ClusterMaxEditDist=0.135185;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2104;DistBack=-12;DistForward=29099;DistMin=-12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=30;REFWIDENED=13:39530916-39530945;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9995;PctRecOverlap=0.9886;SizeDiff=-1;StartDistance=24;EndDistance=24;GTMatch=0;TruScore=99;MatchId=1408.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:100:1/1:0:25:1:12:./.:4:9:2:7:0/1:9:23:1/1:5:107:.:2116:.
chr13	41252412	HG2_Ill_GATKHCSBGrefine_9326	G	GCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTTGCTCACTGCAACCTCTGCCTCCAGGGTTCAAGTGATTGTCCTGCCTCAGTCTCCAGAGTAGCTGGGATTGCAGGCATATACCACTACGCCCGGCTAATTTTTTTTTTTTTTTTTTTGAGTTGGAGTCTCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6976:HG4_PB_SVrefine2Falcon1Dovetail_8519:HG3_PB_pbsv_13686:HG2_PB_HySA_25503:HG2_PB_pbsv_13988:HG2_PB_SVrefine2Falcon1plusDovetail_2934:HG4_PB_pbsv_13968:HG4_Ill_GATKHCSBGrefine_9625:HG2_Ill_GATKHCSBGrefine_9326:HG4_PB_HySA_20384:HG3_PB_HySA_21093:HG2_Ill_breakscan11_4469:HG4_Ill_SVrefine2DISCOVARDovetail_9911:HG3_Ill_SVrefine2DISCOVARDovetail_10067;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9326:HG4_Ill_GATKHCSBGrefine_9625;NumExactMatchSVs=2;ClusterMaxShiftDist=0.155763;ClusterMaxSizeDiff=0.143302;ClusterMaxEditDist=0.244514;PBcalls=9;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=167;DistBack=93805;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9104;REFWIDENED=13:41262217-41252518;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:17:0|1:21:5:1:15:0|1:15:0:0:17:0/1:17:10:./.:.:.:.:.:.
chr13	42135094	HG2_10X_SVrefine210Xhap12_9731	G	GGCCAGGAAAACATCCCAGAGGGACTCTATTATAGTCTTTATCTTTAAGGCAGTTCCAGTGCTAACAGCCTCCTCCAGAGAAATCTGTTGCAGAGCAAACTACTGGGAGACACTCCTAAGAAAGGCCATTTCGCCTCATCCAGAGACAGGCCATGGCAGAGTTTGAGAAGCACAGTTTTCACCAGGAAACAAATTCAAGATCACAACCATGTGTGCAAATCAGGCAGCAAGCACAGGCTGTGCATGGTCCTGGCGGAACGGAGTCCTGGGAGAGGAGTGGCCTCCATGATCTGCCACTGCACTCCCACTGCTTTACCTGGGGCTTTTCTTTCATTTGGTTCCTACTTCATTCATCCAAAGAGGCTGCTCTGGGCTCTGCATCTGCTCTGAGGTGTTTGACCAGGATGACCTGGTTTCCAAACAAAATTGGTCAAAGAGACTCTCATCTCTTAGGGGCCCACTTCCCTCTGAGGGCTGAAAACCAAATGCTCCTGCTTTTGGGGCAAGTGACGACCTCCTCATGAGAACATGCCTCTCACAAAGGACCTCCCTCATCCTCTCCAGAGGAGAAGTGGAAACAAGAAACGCCTGGTCCAGAGCCAGGATTGCTACGTCATGGATGTGAAATGCTCAGGATGCCCCAAGGCCGCCGTGGTCTGGGAGTTTTGCGTTGTTGACTGCCCAGCTTGTCGTCTGCTACCCGACAGGGGGACAAGTGAGGCTTACAGAAAGATGCTCCTTCAGACAGAGCAGCACCACAAGCTCCCTGAATCAAGATGAGTGGGAGACCATCCCAATAAACACCTTTCAGATCAATGAAACCTCAAACGAAAACCCCAAATCAAACTCCAAATGCCTCTTGAACTGGATAGCACTTCTGGTTTATGAGGCATTTTCATTATCTTATTTCAATCTTCACATGAACCCTAAGAGATGGGATTATGATCCTCATCTGAGAGGTGAGGAACCTGATGCTCAGAGAGACCAGAAAACCAGCCCCAAGTCATGGGGCTCATAGGGCAGGCAGACCCAGGATTCTGCACTGATCCTGCCATCTTTGAATCCTGCACCAAGTAGATTTGAGTTCGGGTTTCTCAGGTATTCGTGACCTGGCGGGATGGAATTGACTATGCCAACTAGGGTGCGTCATCTTATCACAAACGTCAACTTCTCTCTTTCTATGCTCATCCTTTGGTTTGTCTGACATATAGAATATTTTCACGGTGCCAGCCATGTGACCTCTATTTACAGAAGACCTAGGTGGGACAGTCTAGTTGAATGATATCCAAATGACAGGACAAATTAGATTATCAAGGGGAAGGGCTGACATGGTTTTAAGGGGGAAATTGTGTCATGAATCTTTTTTTTATAAGCACTTTGTGGGTGGGAGTAATGAAGTGGGGAGAGAGGTAATTTGTCAAACAAGGATCAGAAAACACAAAACTGGTTCTCCTTGGAAGAGGAAAAAAGAGAAACTTTTTTTTTTTTTGAAACTGGGTCTCATTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCATGGCTTACTGCAGCCTCGACCTCCCAGGCTCAAGTGATCTTCCCCCCTCAGCCTCCCGAGAAGCTGGGACCACAGGCATGT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8822:HG2_PB_SVrefine2PBcRplusDovetail_2797:HG2_PB_SVrefine2PB10Xhap12_10103:HG2_Ill_Spiral_934:HG3_PB_pbsv_13695:HG2_PB_pbsv_13996:HG3_Ill_SVrefine2DISCOVARDovetail_10073:HG2_PB_SVrefine2Falcon2Bionano_6962:HG2_Ill_SVrefine2DISCOVARplusDovetail_3248:HG2_10X_SVrefine210Xhap12_9731:HG2_PB_SVrefine2Falcon1plusDovetail_2940:HG3_PB_SVrefine2Falcon1Dovetail_8470;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9731:HG2_Ill_SVrefine2DISCOVARplusDovetail_3248:HG2_PB_SVrefine2Falcon2Bionano_6962:HG3_Ill_SVrefine2DISCOVARDovetail_10073;NumExactMatchSVs=4;ClusterMaxShiftDist=0.035899;ClusterMaxSizeDiff=0.0346821;ClusterMaxEditDist=0.145946;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=1619;DistBack=38814;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=13:42135095-42135099;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1410.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:50:./.:17:20:3:27:0|1:29:0:0:8:0/1:17:28:0/1:63:99:.:1636:.
chr13	42145403	HG2_PB_SVrefine2PBcRplusDovetail_2798	A	ACCCTGTCCCTCTCCCGTCTCCCTCTCCCGTCTCCCTCTCCCTCCTCCCTCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6963:HG3_PB_pbsv_13696:HG2_PB_PB10Xdip_8824:HG2_PB_pbsv_13997:HG2_PB_PB10Xdip_8823:HG2_PB_SVrefine2PBcRplusDovetail_2798:HG2_PB_SVrefine2PB10Xhap12_10104;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6963:HG2_PB_SVrefine2PBcRplusDovetail_2798:HG2_PB_SVrefine2PB10Xhap12_10104;NumExactMatchSVs=3;ClusterMaxShiftDist=0.146789;ClusterMaxSizeDiff=0.12844;ClusterMaxEditDist=0.234234;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=51;DistBack=10301;DistForward=2218;DistMin=2218;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=110;REFWIDENED=13:42145404-42145513;PctSeqSimilarity=0.9779;PctSizeSimilarity=1;PctRecOverlap=0.6863;SizeDiff=0;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=88;MatchId=1411.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:32:0|1:22:2:1:29:./.:18:0:11:1:0/0:10:0:./.:.:.:.:.:.
chr13	42223740	HG2_PB_pbsv_13999	A	ATTTAATTTATTTTTTTATTGATAATTCTTGGGTGTGTTAGGCTCACAGAGGGGATATTGGCCCAGGGTCATGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAATGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTATGACTCTTAACGGAGCATGCTGCTTCAAGCATCTGTTTACAAAGCACATCTTGCACCGCCCTAAATCCATTTAACCCGAGTGGCGACCACAGCACATGTTTCAGAGAGCACAGGTGGGTGGTTAAGGTCACAGATCACTATCATCCCAGACAGAGGAATTTCTATGCAGAACAAAATGAAAAGTCGTTCCCATGTCTACCTCTTCTCACAGACACGCGCAACCATCCGATTTCCCAATCCTTTCCCCGCCTTCCGCCTTTCTATTCCAACAAAGCGCCATTGTCATCCTGGCCCGTTCTCAAAATGAGCTGTTCTTGGGCACACCTCCCAGACGCGGGTGGTGGCCGGGCGGAGGCGCCCCTCACCGTCCCGGATGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCCCCACCTCCCTCCCAGACGGGCGGCTGGCCGGCGGCGGCTGACACCCCCACCTCCCTCCCGGGATCGGGGCGGCTGGCCGGGCAGGAGGGCTCCCTGCACTTCCCAAGTAGGGTCGACGGCAAGAGGCGCCCCTCACCTCCCGGACGGAGGCTGTCTGGCCGGGCGGGGGGCTGACCCCCCCCCCAAACCTCCCTCCGGCGGGGCGCTGCCGGGCCAGAGGGGCTCCTCACTACCCAGTAGGTGCGGCCGGGCTATATGGCGCCCCTCACCTCCCGACGGTCATCTGGTTCCTCTATTGGCTTTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGCGGGTGGGGGCTACCCCCACCTCCCTTCCCGGACCGAGGCGGCTGGTCCCGGCGTTGGGGCTGACACCCCACCCTCCCTCCCTGAAACAGGGCGGCTGGTTCCGGGCGGGGGCGCTGAACCCCCGCCACCTCCTCTCCGATGGTCTGGCTGGCTGGCGGGGGTCTCTATCTCTCTCTCTATTTGTCTCTCTCTCTCTCTACGGGGCGGTGCCGGGCCAGAGGGCTCCTCGACTTCCCAGTAGGGGCGGCCGGTTTCAGAGGCACCACCTCACTCCCAGATCGGTGGGTCGGGCTGGTCCGGCGGAGGGCGGACCCCCCAACCTCCCGGCCCTATTCTATCTCTCTACCCCCCACCTCCCTCCTCTATCTCTGCTGCCTCGCAGAGGGCTCCTCACTCCCAGTAGGGCTGTTTCCCGGGCAGAGCCGCCCCTCACCTCCCAGACGGGGCGGCTGCCGGCGGGGCGCTGACCCCCACCTCCTCCCTGCACGGGGCGGCTGGCCAGGCGGGGCTGACCCCCCCCACCTCCCCTTCGCCGACGCGGGGCGGGCTGCCGGTGGGCTGACCCCCCCATTTCCCTCCTGAGTCGGTGTATGCCGGCTGAGGGCTCCTCACTTCCCATAGGTCGCGGCCGGAAGCGCCCCTCACCTCCCAGGGCGGCTGGTTTCCGGCGGCGGGGCTGACCCCCCACCTCCCTCTCTCTATCTCTAACGGCTGGCCGGCGGGGTGCTGATCTTCCTCTCCTATCTCTCTCTCTTCTCCGGACGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCACCTCCCTCCCGGATGGGGCCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCCACCTCCCTCTTCTCTTATCTCTCTCTGGCGGAGAAACGCTTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGCAGCTGCGGGCGAGGGCTCCTTCACTTCCAGACGCGGGTGTGCCAGGCAGGGGTCTCCTCACTTCTCAGACGGGGCGGCCCCGGGCAGAGACGGCTCTCACTCTCCCAGACGGGGTCTCCGGCCTCTGGGCAGAGCGCTCCTCACATCCCAGATGGGGCTGCGGTGGCAGAGGCGCTCCCCTACATCTCAGACGGATGGGGCTGCCGGGCAGAGGAGCGCTCCTCACTTCCTAATGTGATGGCGGCTGGGAAGAGGCACTCCTCACTTCCTAGATGGATGCCGGTCCGGGCAGAGATCGCTCCTCACTTTGCCAGACTGTTCATTCTATCTATATCTCTCTCTATCTATCCCAGACGATGGCGGCCAGCCAGAGACACTTCCTCACTTCCCAGACGAGTTGGTGCGGTTTTCCGGGCAGAGGCTGCAATCTCGGCACTTTGGATGAGGCCAAGGCAGGCGGCTGGGACTGATTGTACGTTTAGTGACGAGATCACGCCACTGCACTCCAGCCGGGCCACCATTGAGCACTGAGTGAACGAGACTCCTCTTGCAAGTCCCGGCAACCTCGGAGCCGAGGTTGGGGATACAACTCGAGCCGGTGAGGGGCTGGAGACGCCGCCCAGCCAAACAGCGAAAAATCCCCCGTCTCCACCAAACCAGTCAGCGTCGCGCGCGTTGCCTGCAATCGCAGGCATGGCAGACTGAGGCAGGAGGAAATCAGGCAGGCGGTTGCAGTGTGAGCGAGATGCAGCAGTACAGTCCAGCTTCGGGCTCCGGCATAGAGGGAGACCGTGGGGAAGGAGAGGAACGGAGAGGGAGAGCGAGAGGAGAGAGAGGGAGAGGAAGCGATCATTTTTGTTT	10	PASS	ClusterIDs=HG2_PB_HySA_25519:HG2_PB_SVrefine2PB10Xhap12_10106:HG2_PB_PB10Xdip_8827:HG2_PB_HySA_25520:HG2_PB_pbsv_13999:HG2_PB_SVrefine2Falcon1plusDovetail_2942:HG2_PB_SVrefine2PBcRplusDovetail_2800;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_13999;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0969697;ClusterMaxSizeDiff=0.0969697;ClusterMaxEditDist=0.228788;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2751;DistBack=-29;DistForward=26149;DistMin=-29;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=13:42223741-42223740;PctSeqSimilarity=0.922;PctSizeSimilarity=0.9931;PctRecOverlap=0.9913;SizeDiff=19;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=96;MatchId=1412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:54:0|1:38:1:1:34:./.:0:3:30:0:0/1:27:9:0/1:101:58:.:2790:.
chr13	42571547	HG2_PB_SVrefine2PBcRplusDovetail_2802	T	TAAAAATCGTTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCGCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4472:HG2_PB_pbsv_14002:HG3_PB_assemblyticsfalcon_6833:HG2_PB_assemblyticsPBcR_6588:HG4_PB_pbsv_13979:HG4_PB_HySA_20400:HG3_PB_pbsv_13699:HG4_Ill_manta_3283:HG4_Ill_MetaSV_1301:HG3_Ill_MetaSV_1352:HG2_PB_SVrefine2PBcRplusDovetail_2802:HG2_PB_SVrefine2PB10Xhap12_10109:HG2_PB_SVrefine2Falcon2Bionano_6966:HG2_PB_SVrefine2Falcon1plusDovetail_2944:HG2_Ill_manta_3862:HG2_Ill_MetaSV_1226:HG2_10X_SVrefine210Xhap12_9733:HG3_Ill_GATKHCSBGrefine_9243:HG2_Ill_GATKHCSBGrefine_9333:HG3_PB_SVrefine2Falcon1Dovetail_8473:HG4_PB_SVrefine2Falcon1Dovetail_8524:HG2_PB_HySA_25521:HG2_PB_PB10Xdip_8832:HG2_PB_PB10Xdip_8831;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_MetaSV_1226:HG2_Ill_manta_3862:HG2_PB_SVrefine2Falcon1plusDovetail_2944:HG2_PB_SVrefine2Falcon2Bionano_6966:HG2_PB_SVrefine2PB10Xhap12_10109:HG2_PB_SVrefine2PBcRplusDovetail_2802:HG3_Ill_MetaSV_1352:HG4_Ill_MetaSV_1301:HG4_Ill_manta_3283;NumExactMatchSVs=9;ClusterMaxShiftDist=0.141732;ClusterMaxSizeDiff=0.141732;ClusterMaxEditDist=0.261261;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=313;DistBack=115487;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=13:42571548-42571560;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1413.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:5:28:0:15:1/1:0:8:0:8:1/1:0:28:1/1:2:56:.:.:.
chr13	42725669	HG2_Ill_GATKHC_22376	A	ATATATATATACACGTGTATATATATACACGTGTATATATATATACACGTGTATATATATACACGTG	10	PASS	ClusterIDs=HG2_Ill_GATKHC_22376:HG4_Ill_GATKHC_22350:HG4_Ill_GATKHCSBGrefine_9633:HG4_Ill_150bpfermikitraw_17768;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHC_22376:HG4_Ill_GATKHC_22350:HG4_Ill_GATKHCSBGrefine_9633:HG4_Ill_150bpfermikitraw_17768;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=66;DistBack=-3;DistForward=7;DistMin=-3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=13:42725642-42725694;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1414.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:16:./.:24:6:8:7:./.:2:24:19:7:0/1:18:17:./.:.:.:.:.:.
chr13	42726786	HG2_PB_SVrefine2Falcon2Bionano_6967	G	GGACCTCTTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8474:HG4_PB_pbsv_13981:HG2_PB_HySA_25525:HG2_PB_pbsv_14004:HG2_PB_SVrefine2Falcon1plusDovetail_2945:HG4_PB_SVrefine2Falcon1Dovetail_8525:HG4_Ill_MetaSV_1302:HG2_PB_SVrefine2Falcon2Bionano_6967;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6967:HG4_Ill_MetaSV_1302;NumExactMatchSVs=2;ClusterMaxShiftDist=0.077728;ClusterMaxSizeDiff=0.0687593;ClusterMaxEditDist=0.155198;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=327;DistBack=1108;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:42726787-42726801;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1415.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:23:./.:28:6:11:12:./.:1:3:26:0:0/1:20:13:0/1:6:36:.:.:.
chr13	42771388	HG2_PB_SVrefine2Falcon2Bionano_6970	C	CAACAACAAAAAAAAATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAATTAAAAAAAAAATAAAAATAAAAATAAAATAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8528:HG3_PB_assemblyticsfalcon_6837:HG2_PB_SVrefine2Falcon1plusDovetail_2948:HG2_PB_HySA_25527:HG4_PB_SVrefine2PBcRDovetail_6983:HG2_PB_SVrefine2Falcon2Bionano_6970:HG2_Ill_MetaSV_1228:HG3_PB_SVrefine2Falcon1Dovetail_8477:HG2_Ill_GATKHCSBGrefine_9335:HG2_PB_pbsv_14007:HG4_PB_pbsv_13984;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6970;NumExactMatchSVs=1;ClusterMaxShiftDist=0.230964;ClusterMaxSizeDiff=0.230964;ClusterMaxEditDist=0.307888;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=419;DistBack=-14;DistForward=-1;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:42771389-42771403;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9976;PctRecOverlap=0.9952;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:51:37:./.:37:7:17:24:./.:1:11:33:1:0/1:14:14:0/1:8:51:.:.:.
chr13	42940072	HG4_Ill_GATKHCSBGrefine_9635	T	TAAAAAAATAGTTTTTCGGGCCGGGAGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_14008:HG2_PB_SVrefine2Falcon2Bionano_6971:HG3_PB_pbsv_13701:HG2_Ill_breakscan11_4473:HG2_PB_SVrefine2PB10Xhap12_10112:HG2_PB_SVrefine2PBcRplusDovetail_2805:HG2_PB_PB10Xdip_8834:HG3_PB_HySA_21112:HG4_Ill_MetaSV_1304:HG4_Ill_GATKHCSBGrefine_9635:HG2_PB_HySA_25531;NumClusterSVs=11;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_9635:HG4_Ill_MetaSV_1304;NumExactMatchSVs=2;ClusterMaxShiftDist=0.305732;ClusterMaxSizeDiff=0.273885;ClusterMaxEditDist=0.359873;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=329;DistBack=107636;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:42940073-42940088;PctSeqSimilarity=0.972;PctSizeSimilarity=0.9454;PctRecOverlap=0.9427;SizeDiff=-19;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=1417.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:35:1|0:7:28:11:2:./.:26:0:0:3:0/1:28:14:0/1:6:28:.:.:.
chr13	43050578	HG2_Ill_250bpfermikitraw_18698	G	GCCCCGTCTGGGAGGTGGGGAGCGCCTCCGCCCGGCCGTCCCGTCTGGGAGGTGGGGAGCGCCTCCGCCCGGCCT	20	PASS	ClusterIDs=HG2_PB_pbsv_14011:HG3_PB_HySA_21115:HG3_PB_pbsv_13704:HG3_Ill_250bpfermikitraw_18172:HG2_Ill_250bpfermikitraw_18698:HG2_PB_HySA_25535;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18698:HG3_Ill_250bpfermikitraw_18172;NumExactMatchSVs=2;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.28;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=111;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=16;REFWIDENED=13:43050577-43050595;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1418.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:28:1:2:42:./.:12:0:8:1:0/1:37:11:./.:.:.:.:.:.
chr13	44044545	HG4_Ill_SVrefine2DISCOVARDovetail_9921	T	CACATATATATGTATATATATACACATATATATGTATATATGTATATATATACACATATATATGTATATATATGTATATATATACACATATATATGTATATATATGTGTATATATATAC	20	PASS	ClusterIDs=HG2_PB_HySA_25545:HG4_PB_assemblyticsfalcon_6752:HG4_PB_SVrefine2PBcRDovetail_6990:HG4_PB_SVrefine2Falcon1Dovetail_8535:HG4_Ill_SVrefine2DISCOVARDovetail_9921:HG2_Ill_SVrefine2DISCOVARplusDovetail_3261:HG4_PB_HySA_20414:HG4_PB_pbsv_13991:HG2_PB_pbsv_14016:HG4_Ill_svaba_17508:HG2_Ill_svaba_17473;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3261:HG4_Ill_SVrefine2DISCOVARDovetail_9921:HG4_PB_SVrefine2Falcon1Dovetail_8535;NumExactMatchSVs=3;ClusterMaxShiftDist=0.147186;ClusterMaxSizeDiff=0.147186;ClusterMaxEditDist=0.199134;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=118;DistBack=21;DistForward=8534;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=172;REFWIDENED=13:44044373-44044544;PctSeqSimilarity=0.9771;PctSizeSimilarity=1;PctRecOverlap=0.7143;SizeDiff=0;StartDistance=34;EndDistance=34;GTMatch=0;TruScore=89;MatchId=1419.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:38:./.:17:27:11:1:./.:1:21:13:6:0/1:11:25:./.:.:.:.:.:.
chr13	44069827	HG2_PB_SVrefine2PB10Xhap12_10121	C	CCTTTCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTCTTTAGTCTTCAATTTTATTTCTATTTTAAACAGCAACTAACAGCTTGGAAATGTCCTAACAGCTAGGACCCGCCCCATGCATTCCAGAGGCTCCCCACCAAGGCTGGGGTCCAGGTTCCAGGAATTCCCCTCATCAGGCCTGATTTCTCTCTGGAGACTTGGGACAGAAGAGGCTGTCCAGTTAGAGGGGAAGTTGGCACTAAAGGTCACCGTTTAGAAGGGTTGGGCTCAGACACAGCTGCCTTTGTTAGTCTTAGGATATTTTGAGATTTGGTAGCGTGCTCAGATTGTGGGTATGGAGAAGGGTTCCTGAACTCCTCTCCGGCCTCACTTGCTCCTGGGCAAGCCTCACAGCACCCCTTCCTCTTGCTGGCTCGGCACGCTGCCTTTGGAAGAGGGGCACCTGATAGGCTGGGTACTCCAGCATGCCTTTGTGTGACCCGGTCAGCTGCAGGGAAGCATGCTCCCCTCAACTTCTCCTGGCGTAGGCAGGGTGCGGAATCAGAAAGATGGTGAAGATTCAGACCTGAGATACCAACCCCTTACCAACCCTCACCTAAAAGGGAATATTACAAGGACATCTCTTTGTGACTTGGAGGGGCACACCTGGATATTTAAACCCCAAGTGTGGTAATAGCTGGGCCACCAGGCTGGAGGCAGCTCAATGCATGCACTTAAGCAGCAGGGGCAGCTCAGCAGGAGGGTAGGGCCCACAGAGCTGGACCTGCCCTCCCCACACTGCCATCCACACCCATGGTAACCATGGAAACATAACCACCCCACTCCTGCCAGCTGCCTGGGTTCAGACAACCAGGACTGGCCCACTTCCATCAAGCCAAGGCCTAAACTGATGCCAGGCTGGCCACAGAGTGGTTGCAGGAAGAACTGGGATTGGGTGATTTGGTCAGTCCGGGCTTCCCAGCACAGCTTGGGAGGACTACCACAGGAGCCTCCACACCTTGCTGTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCCTCTGCCTGTGGGCTAACAGCTACTGTGTGGCAGTAGCCCTTGCTGCAGCAGCAAAAGCCTCTGTGTCTCATTGAGGGGACTCTCTGGCTGGTGCTCTGCCTGCCCTGGCTGCTCAGCCAGCCCTCCGGGGGTGAGTATGTACCGACAGTCACTGGGAGTGCCACCCACTGCCCCCATGCCACTGCCATCCCCAGCCCCACTGTAGGGCTGATCCCTGCCAGGTAGCTCCAGGCTGCCTCCCGCAGTGGGCTCCTCAGCTCTCTCGATGTTGATGTATAAGGGGTCCTGGCTGGCAGATAGCACAGACAGCTGGCCCAAGATGTTCTCCAGTTCCATTCGCAGACAAGTAAAGCTCGGGCGCTGCTTGGGGTCAGCACTCCAGCACTGGTACATGAGATCATACACGTCCTCCATACACTCCGGAGGCTGTTTCAGGCGGTTCCCGCCAATGAGGTAGTTGTAAATCTCAGCGTTTTCGATGCCAGCATATGGCGTCTGCCCACGTGTCATGATCTCCCACATGGTCACCCCGAACGCCCACACGTCACTCTGCACAGTATACAGGTTGTCGGCCAGGCTCTCCAGGGCCAGCCACTTGACAGGCAGTTTGGAGGCACAGCCTTGACGATAGTAGTCCCCACTGTAGATCTTCCGGGAGAGTCCGAAGTCAGCCACACACAATGTCATGTCCTCTGCCAGCATGCAATTCCGAGCAGCCAGGTCTCGGTGGATGAAGTTCCGAGAGCTCAGGTACTCCATGCCGCAGGCAATGTCCACCATGAACCGGATCAGGGTCTGGAGGGGTAGGTTAAAGGGGTTCTCCCCAATCCGGGAGGCGAGCAGGAAGGCATGCAGGTCCCCATGCTTCATGAAGGGCAAGATGACCATGGGGATGGGGAGACGGCCTTTAGCCCTGCTCCGGAGGCTTACCCCAACAAGTTTGGCCACGTGTGGATGGTCAAACTCCTTCATGCAAGCTGCTTCCCTGAGGAACTCTTCAATGTCGCTTGAGGCAATGATGTCAGCTTTCAGCATCTTCACAGCCACTTTCACAAAGGAGCCATCCTCTTGCTTCAGCTGGGCCTCCCGCACTGAACCAAACTCTCCTTTGCCCAACATCCGGCCCAGGGTGAACTGCTGCTCTGGGATGAGCACATCCTCCAGTTTTTCCTTTAGTTCATCGCTGATGCCCAAGCTGTCCAATGTGGCCTCGATGCGCTCGGGCCTTTCTCGATTGAAGGACCGGGCTGCCCGGAAGTGAACGGCTGGCTCTCCCCGGGCCATGACACTGTCAAAGGCTTGCCCAAACCGCGTCTCTTTCCGTCTCTTTCGAAGCAGGATGAGGGCCAGGGCAGCAGCCGTCACCAGGGCCGTTAGCACACCAAGGACCACAGGTACCCAGGATGTGCGGCTGTGAGGAGGGCCCTGCTGGCCTGCACGGTCATGAGAAGAGACCACCAGTGGCTGACTCCAGGGTCCACAGCCAACTGCATTGGAGACGCACACACGTACGATCAGGTCCTTTTGGGGATCCCAGCCTGTCAAATTGGCCCTGGTCCCCTCCACTGTCAGCTCATCCTGGGTTCCATTGTCTTGAACCCAGGACAGTTTGTAGGGTCCCAGGGGGCCTTCCAAAGGGGCCTCGGGGATCACTTCTTCCCACTCCAAGATGAGGCCTGAATCTGTGCGGATGGCATGGAGGTTTTGGGGAGCGCTGGCTGGGGCTAGACCCTTGGTCTGAAAGGGCACCCAGTCAGCATAGGGAGAGGGCCCCAAGGCATTGGCACAGCGCACCCTGAGGCTGTAGTTGGTGGCAGGCACCAGGTCCCGGAGCAGGCAGGTAAAGGGGGGCACAGGGACCACAACAGCCAGGACTTCCCAGCCTCCTGGGGCCTGTGTCACCTGAACTGTACAGGACTGTAGCAGAGCTCGGCCATCAGCACCTGGCATCCAGGCCACACTAGCGTTGCTGCTGGAAAGCTTTGTCACGGTGATGTTGAAGGGGGCTGCAGGCAGTGCTTGAAGGTGAACAGTGGCTGTGCGAGAAGAGGCCAGGCCTTTTAGGTTGTGAGCTTCACAGGAAAACATGGTGCTCTGGGTCACCCCTGTTACATTTAAAACAGATGGAGAGGGAGCGGGTCCCCCGATCTTCGTAGTTCCTCTCCACCAGACAATGGTAACAGGTTCAGGGGGACCCACAGCCTCACAAGACAGTTGGAAAGGGGCATTGGGTGGCACTGCCAGATCTTTTGGCTCCACTGTGAAAAATGGCACACCTTCTACCGTGAGCCACACTGGCTGGGAGATCTCGGTTTCACCCCCATCCTCCACCTGGCACCAGTACCGGCCGGCGTCAGAGCGCTCCACTGACTTCAGGCTGAGGAAGCCGATCCAGTGCTGCTCGCTGACTGGGATGTACAACTGGTCCAAGTTCTGGACCACAGCCCCATCCTTCACCCACTGGATGTCAGGCTCCTCCATCCCCTCCACACTGCAGTTGAGCTTCACCGGCTGCCCCTGAGACACTGTCAGCTTCACCGGGGCTCCCATGAGCTTCAGACCTGCGGCGGCGGACTCCGCCAGCAGCAGCCCGAGCCGCGGTGGCGGCGGCAGCGGCAGCGGCGGGAGCCCCGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4474:HG2_PB_pbsv_14017:HG3_PB_SVrefine2Falcon1Dovetail_8485:HG4_PB_assemblyticsfalcon_6753:HG2_PB_PB10Xdip_8843:HG2_PB_SVrefine2PB10Xhap12_10121:HG4_PB_SVrefine2Falcon1Dovetail_8536:HG4_PB_SVrefine2PBcRDovetail_6991:HG2_PB_SVrefine2PBcRplusDovetail_2813:HG2_PB_SVrefine2Falcon1plusDovetail_2956;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10121;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0387863;ClusterMaxSizeDiff=0.0385224;ClusterMaxEditDist=0.190789;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=3717;DistBack=16746;DistForward=120390;DistMin=16746;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=13:44069828-44069838;PctSeqSimilarity=0.9875;PctSizeSimilarity=0.9753;PctRecOverlap=0.9753;SizeDiff=-94;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=97;MatchId=1420.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:60:0|1:47:6:0:39:./.:0:4:27:0:0/0:22:1:0/1:157:278:.:3792:.
chr13	44551898	HG2_PB_SVrefine2Falcon2Bionano_6978	C	CTTCCTTCCTTCTTTCTTCCTTCCTTCCTCCCTCCCTTCCTCCCTCTCTCTCTTTCTCTCCCTTCCCTTCCCTCCCTCCCTCCCTTCCTTCCTTCCTCCCTCCCCCTCCCTTCCCTCTCTCTCGCTCTCTTTCTTTCTTTCCTTCTCTTTCTTTCTCTTCTTCCCTTCCTTCCTTCCTCCCTCCATCCCTCCCTCCCTCTCTTTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCTCCTCCCTTCCCTCCTTCCTTCCTTCCTCCCTCCATCCCTCCCTCCCTCTCTCTTTCCCTCCCTCCTTTCCTTCCTCTCTCTCTTTCCCTCCCTCCTTTCCTTCCTCTCTCTCTTTCCCTCCCTCCTTTCCTTCCTCTCTCTCTTTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCTCCTCCCTCCCTCCCTCCCTCCTCCTCCCTTCCCTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCCCTCTCTCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8538:HG2_PB_pbsv_14020:HG3_PB_pbsv_13711:HG4_PB_pbsv_13994:HG2_PB_PB10Xdip_8846:HG2_PB_PB10Xdip_8845:HG4_PB_HySA_20422:HG2_PB_HySA_25555:HG3_PB_HySA_21131:HG2_PB_SVrefine2Falcon1plusDovetail_2958:HG3_PB_SVrefine2Falcon1Dovetail_8488:HG4_PB_SVrefine2PBcRDovetail_6993:HG2_PB_SVrefine2PBcRplusDovetail_2815:HG2_PB_SVrefine2PB10Xhap12_10122:HG2_PB_SVrefine2Falcon2Bionano_6978;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6978:HG2_PB_SVrefine2PB10Xhap12_10122:HG2_PB_SVrefine2PBcRplusDovetail_2815;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0422535;ClusterMaxSizeDiff=0.0402415;ClusterMaxEditDist=0.169561;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=491;DistBack=37162;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=219;REFWIDENED=13:44551899-44552117;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:./.:0:4:1:3:1/1:0:22:1:20:1/1:0:11:./.:3:25:.:.:.
chr13	46059537	HG2_PB_PB10Xdip_8855	G	GGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGTGGCTGGCCGGGCAGGGGGGCTGACACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGTGCAGAGGGGCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGACGGCTGGCCGGGTGGGGGGGCTGACCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGGCCATCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCAGACGGCACGGCTGGCCGGGCGGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGC	10	PASS	ClusterIDs=HG3_PB_pbsv_13723:HG2_PB_PB10Xdip_8856:HG4_PB_pbsv_14002:HG2_PB_PB10Xdip_8855:HG2_PB_pbsv_14030:HG4_PB_SVrefine2PBcRDovetail_6996:HG2_PB_SVrefine2PBcRplusDovetail_2820:HG2_PB_SVrefine2Falcon2Bionano_6983:HG2_PB_SVrefine2PB10Xhap12_10128:HG2_PB_SVrefine2Falcon1plusDovetail_2963:HG4_PB_SVrefine2Falcon1Dovetail_8544:HG3_PB_SVrefine2Falcon1Dovetail_8493;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_8855:HG2_PB_PB10Xdip_8856;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0662691;ClusterMaxSizeDiff=0.0635762;ClusterMaxEditDist=0.275628;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=773;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=458;REFWIDENED=13:46059255-46059712;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9949;PctRecOverlap=0.9949;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1422.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:0:20:0:27:./.:0:0:1:0:0/1:3:7:./.:5:88:.:785:.
chr13	46268065	HG3_Ill_GATKHCSBGrefine_9255	T	TAAGAAGAGGATACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8858:HG3_PB_assemblyticsfalcon_6875:HG3_PB_SVrefine2Falcon1Dovetail_8494:HG2_PB_SVrefine2PB10Xhap12_10130:HG2_PB_assemblyticsfalcon_6864:HG2_PB_assemblyticsPBcR_6627:HG2_PB_SVrefine2PB10Xhap12_10129:HG2_Ill_breakscan11_4476:HG3_Ill_MetaSV_1359:HG3_Ill_GATKHCSBGrefine_9255:HG2_Ill_MetaSV_1235:HG2_PB_SVrefine2Falcon1plusDovetail_2964:HG2_PB_HySA_25569:HG2_PB_SVrefine2PBcRplusDovetail_2821:HG3_PB_HySA_21140:HG2_PB_PB10Xdip_8857;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_1235:HG3_Ill_GATKHCSBGrefine_9255:HG3_Ill_MetaSV_1359;NumExactMatchSVs=3;ClusterMaxShiftDist=0.101106;ClusterMaxSizeDiff=0.101106;ClusterMaxEditDist=0.143791;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=30356;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=13:46268066-46268079;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1423.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:43:0|1:21:6:3:36:1|0:0:8:26:0:0/1:22:11:0/1:7:36:.:.:.
chr13	46647732	HG2_PB_HySA_25573	T	TCTCAATGTACTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCGGCTAATTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_HySA_20435:HG2_PB_pbsv_14035:HG4_PB_pbsv_14004:HG4_PB_assemblyticsfalcon_6775:HG4_PB_SVrefine2Falcon1Dovetail_8545:HG2_PB_assemblyticsfalcon_6869:HG2_PB_HySA_25573:HG2_PB_SVrefine2Falcon2Bionano_6985:HG2_PB_SVrefine2Falcon1plusDovetail_2966:HG2_Ill_breakscan11_4477;NumClusterSVs=10;ExactMatchIDs=HG2_PB_HySA_25573;NumExactMatchSVs=1;ClusterMaxShiftDist=0.12601;ClusterMaxSizeDiff=0.12601;ClusterMaxEditDist=0.212418;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=-1;DistForward=34559;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=13:46647733-46647733;PctSeqSimilarity=0.9889;PctSizeSimilarity=0.9905;PctRecOverlap=0.9874;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1425.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:0|1:30:2:1:22:./.:32:0:4:6:0/1:40:11:0/1:12:20:.:.:.
chr13	47095338	HG2_Ill_GATKHCSBGrefine_9348	C	CAAGAAAGTAAATCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGGGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8893:HG3_PB_pbsv_13731:HG2_PB_assemblyticsfalcon_6873:HG4_PB_pbsv_14010:HG2_PB_assemblyticsPBcR_6633:HG3_Ill_MetaSV_1362:HG2_PB_pbsv_14042:HG3_PB_HySA_21150:HG2_Ill_breakscan11_4479:HG4_PB_SVrefine2PBcRDovetail_6997:HG4_Ill_GATKHCSBGrefine_9650:HG2_PB_SVrefine2PB10Xhap12_10134:HG2_10X_SVrefine210Xhap12_9751:HG4_Ill_SVrefine2DISCOVARDovetail_9933:HG3_Ill_GATKHCSBGrefine_9259:HG2_PB_SVrefine2Falcon1plusDovetail_2967:HG2_Ill_SVrefine2DISCOVARplusDovetail_3273:HG2_Ill_GATKHCSBGrefine_9348:HG2_PB_HySA_25583:HG4_PB_HySA_20440:HG4_Ill_MetaSV_1318:HG2_PB_PB10Xdip_8894;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9348:HG2_Ill_SVrefine2DISCOVARplusDovetail_3273:HG2_PB_SVrefine2Falcon1plusDovetail_2967:HG3_Ill_GATKHCSBGrefine_9259:HG4_Ill_SVrefine2DISCOVARDovetail_9933;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0736196;ClusterMaxSizeDiff=0.046225;ClusterMaxEditDist=0.291351;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=319;DistBack=5621;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:47095339-47095353;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1426.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:39:0:28:1/1:0:13:0:16:1/1:0:17:1/1:2:77:.:.:.
chr13	47293128	HG3_Ill_manta_3159	A	AAAGATGTTCTCACAACAAGTACATAAATGGTTTCTTGTACACATCCTTAAATATCTGCTGAGTGCCTATT	20	PASS	ClusterIDs=HG4_PB_HySA_20443:HG2_PB_pbsv_14044:HG3_PB_pbsv_13732:HG2_PB_PB10Xdip_8897:HG2_PB_PB10Xdip_8896:HG2_PB_HySA_25586:HG4_Ill_svaba_17533:HG4_Ill_SVrefine2DISCOVARDovetail_9936:HG4_Ill_Krunchall_19382:HG4_Ill_GATKHC_22394:HG4_Ill_GATKHCSBGrefine_9651:HG4_Ill_250bpfermikitraw_18494:HG3_PB_SVrefine2PBcRDovetail_6609:HG3_Ill_svaba_17659:HG3_Ill_manta_3159:HG3_Ill_Krunchall_18693:HG3_Ill_GATKHC_22302:HG3_Ill_GATKHCSBGrefine_9260:HG3_Ill_250bpfermikitraw_18206:HG3_Ill_150bpfermikitraw_17701:HG2_PB_SVrefine2PB10Xhap12_10136:HG2_PB_SVrefine2Falcon2Bionano_6986:HG2_PB_SVrefine2Falcon1plusDovetail_2969:HG2_Ill_svaba_17499:HG2_Ill_SVrefine2DISCOVARplusDovetail_3276:HG2_Ill_Krunchall_19073:HG2_Ill_GATKHC_22426:HG2_Ill_GATKHCSBGrefine_9349:HG2_Ill_250bpfermikitraw_18737:HG2_Ill_150bpfermikitraw_17666;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17666:HG2_Ill_250bpfermikitraw_18737:HG2_Ill_GATKHCSBGrefine_9349:HG2_Ill_GATKHC_22426:HG2_Ill_Krunchall_19073:HG2_Ill_SVrefine2DISCOVARplusDovetail_3276:HG2_Ill_svaba_17499:HG2_PB_SVrefine2Falcon1plusDovetail_2969:HG2_PB_SVrefine2Falcon2Bionano_6986:HG2_PB_SVrefine2PB10Xhap12_10136:HG3_Ill_150bpfermikitraw_17701:HG3_Ill_250bpfermikitraw_18206:HG3_Ill_GATKHCSBGrefine_9260:HG3_Ill_GATKHC_22302:HG3_Ill_Krunchall_18693:HG3_Ill_manta_3159:HG3_Ill_svaba_17659:HG3_PB_SVrefine2PBcRDovetail_6609:HG4_Ill_250bpfermikitraw_18494:HG4_Ill_GATKHCSBGrefine_9651:HG4_Ill_GATKHC_22394:HG4_Ill_Krunchall_19382:HG4_Ill_SVrefine2DISCOVARDovetail_9936:HG4_Ill_svaba_17533;NumExactMatchSVs=24;ClusterMaxShiftDist=0.109589;ClusterMaxSizeDiff=0.0821918;ClusterMaxEditDist=0.2;PBcalls=10;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=-70;DistForward=-1;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=71;REFWIDENED=13:47293129-47293199;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:./.:0:3:0:1:1/1:1:21:0:20:1/1:0:52:./.:.:.:.:.:.
chr13	47827614	HG2_Ill_Krunchall_19079	A	AACTTCTCTATCCAAGTTCTATCTATCTGGATAGAACTTCTATCCAGAAGTTCT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17673:HG3_PB_pbsv_13734:HG2_Ill_breakscan11_4480:HG3_PB_HySA_21157:HG3_Ill_svaba_17664:HG3_Ill_manta_3161:HG3_Ill_Spiral_14585:HG3_Ill_Krunchall_18699:HG3_Ill_GATKHC_22307:HG3_Ill_GATKHCSBGrefine_9263:HG3_Ill_Cortex_959:HG3_Ill_250bpfermikitraw_18211:HG3_Ill_150bpfermikitraw_17707:HG2_Ill_svaba_17505:HG2_Ill_manta_3868:HG2_Ill_SpiralSDKrefine_4283:HG2_Ill_Krunchall_19079:HG2_Ill_GATKHC_22431:HG2_Ill_GATKHCSBGrefine_9352:HG2_Ill_Cortex_2184:HG2_Ill_250bpfermikitraw_18742;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17673:HG3_Ill_svaba_17664:HG3_Ill_manta_3161:HG3_Ill_Spiral_14585:HG3_Ill_Krunchall_18699:HG3_Ill_GATKHC_22307:HG3_Ill_GATKHCSBGrefine_9263:HG3_Ill_Cortex_959:HG3_Ill_250bpfermikitraw_18211:HG3_Ill_150bpfermikitraw_17707:HG2_Ill_svaba_17505:HG2_Ill_manta_3868:HG2_Ill_SpiralSDKrefine_4283:HG2_Ill_Krunchall_19079:HG2_Ill_GATKHC_22431:HG2_Ill_GATKHCSBGrefine_9352:HG2_Ill_Cortex_2184:HG2_Ill_250bpfermikitraw_18742;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.127273;PBcalls=2;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=5;DistForward=1699;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=13:47827613-47827616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1429.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:32:0|1:50:1:2:34:1|0:1:36:32:0:0/1:13:35:./.:.:.:.:.:.
chr13	48281503	HG3_Ill_GATKHCSBGrefine_9265	A	AACAGGGTAGCTGGATTTAGACAGGTTCTGTTTCCTTAAATGTTTGTCTCCACATTAATGAGTCAACTTCTGTCATGCATTTAAAGAAATTTTTTTTGTTGCTAAATTATTGTCT	20	PASS	ClusterIDs=HG2_Ill_Cortex_2187:HG3_PB_HySA_21162:HG2_PB_HySA_25595:HG3_Ill_svaba_17670:HG3_Ill_manta_3163:HG3_Ill_Spiral_14591:HG3_Ill_GATKHCSBGrefine_9265:HG2_Ill_svaba_17511:HG2_Ill_manta_3870:HG2_Ill_SpiralSDKrefine_4287:HG2_Ill_MetaSV_1239:HG2_Ill_GATKHCSBGrefine_9354:HG2_10X_SVrefine210Xhap12_9758:HG3_PB_SVrefine2PBcRDovetail_6612:HG3_PB_pbsv_13736:HG2_PB_pbsv_14048:HG3_Ill_Cortex_962;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9758:HG2_Ill_GATKHCSBGrefine_9354:HG2_Ill_MetaSV_1239:HG2_Ill_SpiralSDKrefine_4287:HG2_Ill_manta_3870:HG2_Ill_svaba_17511:HG3_Ill_GATKHCSBGrefine_9265:HG3_Ill_Spiral_14591:HG3_Ill_manta_3163:HG3_Ill_svaba_17670;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0517241;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.152542;PBcalls=5;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=114;DistBack=109;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=13:48281504-48281503;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1430.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:29:0|1:33:0:0:29:1|0:0:33:19:0:0/1:26:14:./.:.:.:.:.:.
chr13	48286064	HG3_Ill_GATKHCSBGrefine_9266	C	CGCTCCTTATCCAGACACCATCGTATAAAGTGAATATGGGTCTTCTAGGATGAGTTTCCCTTTTCT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_9355:HG3_PB_pbsv_13737:HG3_PB_HySA_21163:HG2_PB_pbsv_14049:HG2_PB_HySA_25596:HG3_Ill_svaba_17671:HG3_Ill_Krunchall_18707:HG3_Ill_GATKHC_22314:HG3_Ill_GATKHCSBGrefine_9266:HG3_Ill_150bpfermikitraw_17714:HG2_Ill_svaba_17512:HG2_Ill_manta_3871:HG2_Ill_Krunchall_19083:HG2_Ill_GATKHC_22438;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9355:HG3_Ill_svaba_17671:HG3_Ill_Krunchall_18707:HG3_Ill_GATKHC_22314:HG3_Ill_GATKHCSBGrefine_9266:HG3_Ill_150bpfermikitraw_17714:HG2_Ill_svaba_17512:HG2_Ill_manta_3871:HG2_Ill_Krunchall_19083:HG2_Ill_GATKHC_22438;NumExactMatchSVs=10;ClusterMaxShiftDist=0.10219;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.228571;PBcalls=4;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=427;DistForward=28250;DistMin=427;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=67;REFWIDENED=13:48286006-48286072;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:25:0|1:32:2:2:24:./.:4:25:25:0:0/1:22:16:./.:.:.:.:.:.
chr13	49486579	HG2_PB_SVrefine2Falcon2Bionano_6989	TC	CTATCATTAGACTACTTCAGATGGGGGAGAAGAGAGCAGTTGATTATAGACTGTGACTTCTTGATCAGAAGAAAATTGGTGTCACAATTTAGCGAGCCTAGGCCAAATCAGTTCTGCTTTAGTTCACAGAAAGGAGTCCAGGGTAAGCAAAATTTTTGGTAAAAGTTGCAGACTTTTCTTATTCCCTTAGAGCCTTGTCATCTGGCCAAACCTAGCTTCAGGAGCATCTGGGAAATGAAATCCAAACAACGTAGCCTTGTATTCACCAAAAATTCCATGATATGGAGGAAAGAGAGAACCAATTTGGAGAGAAAATAACAGTCTGCCTCATCTTCCCAAGTCAGCACAGAATGCAATGCAGAAGAACAGGCACTCCACCTTAATTGCTCTCTAATATCAACTCCCGCCTTGGCCAAGTATTAGCTCTCTGAGCTAGGACCATGACTTAGCCTCAGCTTGCAAAATGGAGACATTAAAATTTACACAGTTGTTATGGAAATTAACTTAATTTATATAATTTATGAATGTAAATTGTTTACTGTAATTACTATGTATTCAGAACCAACAAAAAATTAATGGCATGTGGCCAGCAGAGAAAAGTGCATATAATACACCAAGGAGCAAATCTTAAGTGACACAAAATACAGGCTGCTGGTTAGAAGCATAACCCTGGAGCCAGATTGCTCAGATTTGGATTCTGACTCTACCACTTACGAACCACTTTGGCACGTTAGGTTACATCTGTGCCTCAGTTTCCTCATCTGGAAAGTGGGGATTATAATTAATATCTACCTCTAGAGTTGCTGTGATGATTGCATGACTTAATGTAGAAAGTGTGTAGCACAGAGCCTAGCACATAGCAAGCACTATCTAAGTGTTAATTTCTACCCGTCTTAAAGGTGTGTTGCCAAAGAAAATTAACCAGTATTTCTACGAAATCAATACATTGGCCTGAGTCTTTGCAAGTGACATTACACCTGCACATGCATTGACGATCACCCTAAATATCATGCCATTTTTGTTCCTATTCCCCAGTACTAAGGCTTCTGTGCTTTCCAACCTCAATAGATTAGTATTCTTTAACATGGGAGGTGGGACTACATTCATCACTCAAATTGGACAGGAATTACATCTGCGCCCAATTTCATTTCCTTTTGGAGTGCCATGCATGTTCTCATACATCTTCCGTGGTTCTGTA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8899:HG4_Ill_GATKHCSBGrefine_9661:HG3_Ill_GATKHCSBGrefine_9268:HG2_Ill_GATKHCSBGrefine_9358:HG2_PB_pbsv_14054:HG3_PB_pbsv_13741:HG4_Ill_Spiral_1095:HG2_Ill_Spiral_936:HG3_Ill_Spiral_14594:HG4_PB_SVrefine2PBcRDovetail_7005:HG4_Ill_SVrefine2DISCOVARDovetail_9947:HG2_PB_SVrefine2Falcon2Bionano_6989:HG2_10X_SVrefine210Xhap12_9761:HG2_PB_SVrefine2PB10Xhap12_10141:HG3_PB_SVrefine2PBcRDovetail_6615:HG2_Ill_SVrefine2DISCOVARplusDovetail_3286:HG2_PB_SVrefine2Falcon1plusDovetail_2974:HG4_PB_HySA_20457:HG4_Ill_MetaSV_1323:HG2_Ill_MetaSV_1240:HG3_Ill_MetaSV_1366:HG2_PB_PB10Xdip_8900;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9761:HG2_PB_SVrefine2Falcon2Bionano_6989:HG4_Ill_SVrefine2DISCOVARDovetail_9947:HG4_PB_SVrefine2PBcRDovetail_7005;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0643564;ClusterMaxSizeDiff=0.0643564;ClusterMaxEditDist=0.163052;PBcalls=10;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1196;DistBack=0;DistForward=11521;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:49486581-49486578;PctSeqSimilarity=0.9992;PctSizeSimilarity=1;PctRecOverlap=0.9983;SizeDiff=0;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1432.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:1:27:0:26:1/1:0:31:0:17:1/1:0:40:0/1:22:146:.:1202:.
chr13	50042750	HG4_Ill_GATKHCSBGrefine_9665	T	TGTTACCCTAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG4_Ill_GATKHCSBGrefine_9665:HG2_PB_pbsv_14058:HG4_PB_pbsv_14024:HG4_PB_HySA_20462:HG2_PB_PB10Xdip_8906:HG2_PB_SVrefine2PB10Xhap12_10145:HG2_PB_HySA_25610:HG4_PB_SVrefine2PBcRDovetail_7008:HG4_PB_SVrefine2Falcon1Dovetail_8546:HG4_Ill_MetaSV_1326:HG2_PB_SVrefine2Falcon1plusDovetail_2977;NumClusterSVs=11;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_9665;NumExactMatchSVs=1;ClusterMaxShiftDist=0.299342;ClusterMaxSizeDiff=0.296053;ClusterMaxEditDist=0.305921;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=333;DistBack=28692;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=13:50042751-50042775;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1433.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:27:1|0:4:13:18:4:1|0:0:9:31:0:0/1:37:16:0/1:6:27:.:.:.
chr13	50460723	HG2_10X_SVrefine210Xhap12_9765	G	GTGGCTCACGCCTGTAATCCCAGCACTTCGGGAGGCCCAGGCCGGCGGATCATGAGGTCAGGAAATCGAGACCATCCTGGCTGACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGTCGGGCGTGGTAGCAGGTGCCGGTAGTCACAGCTACTCGGGAGGCTGAGGCAGAATGGCGTTAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACCTCATCTCAAAAAAAAAAAAAAAATTGACATTGGCTTGGATTAAATAGTAACAACAACAAGTATGAGACTTCCTAGTGATTTTTGATCCCAATGTGTTTATCACTGATGGGCCTTCATGTGTGTACTTGAAAACAAAATACATACAAGTGTTGCACTGGTTTGAAAATTTTAGTGGTGAAAGTCACCTAGTCAGTTGACAGTACTGTATCTAGAAACCAATCTTGGAAATGTATGATGATGCTCTCTTATTTATTTAGTTCATTTTATTTTATTTTTGAGATGGAATCTTACTCTGTCGTCCAGGCTGGAGTGCAGTTGCGTGATCGGGGCTCACTGCAACTTTCATCTCCTGGGTTCAAATGATTCTCGTGCCTCAGCCTCCCAAGTAGCTGAGATTATAGGTGCGTGCCACCATGCTTGGTTAATTTTTTAATATTTTTAGTAAAGACCAGATTTCACAATGTTGACCAGGTTGGTCTTGAACTCCTGGCCTCAAGTGATATGCCCTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGTACCCGACAATGATGCTCTTTTAAATAGCTGAAAAGAAATTATTGTGTGCTTGTTCTTACTTTGTCCTTGTTTTGTTGTATAGTATTTAAGTGAAAGGAGATTATTTATCCCCATACCGAATTTCCAAAACTGGTATTTGTAGTTACCATTTTTTAGTGATGGAGAGAAATGTTAGTTGTCTTACTTTGATAAGTTCAGCATAGGACCTGTCACATTTTTTATGCTTTTAGCCACAATTCTGTCACTAGAATGCTAGCAATTAGACATATGCAATGAATAACCTAACTACTTTAATATAGTGGTTTGAAGTGCTGCAGGCAGTGGCTCCTAAACACCAAATCACAGTGTTTTAATTTGTGACGTGTTAGAATGATAGGACTTTCTGGAGTAAAAATATCCTATTAACTAATCCTTGTGCTGTTAAATTACAGGGCTTTGACTCTTGGGTCTGAAGAAGGCACCGACTCCTGCTAAATCTTGAGCATTGATACCAGTCAAAGCTTTGTTGTCAGACCCGGGAGAAGCTGACAATGAAAATGATTGGCTTTTTTTTTTTTTTGTTTGAGACGGAGCCTCACTCTGTCACCCAGGCTGGAGTGCAGTAGTGCAATCTTGGCTCACTGCAACCTCCATCTCCTGGGCTCAAGCAATTCTCTTGCTTCCAGCCTCTGAGTACCTGGGCTTACAGGCACGTGCCACCATGCCCGGCTAATTTTTGTACTCTTAGCAGAGATGGGGTTTCGCCATGTTGGTCAGGCTGGTCTCAAATTCCTGACCTAATATGATCTGCCAGTATAAGCTACTGTGCCCAGCCGTGATCTGCTTTCAAAAGACACAGGGCTGGCTGGGCACAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9765:HG2_PB_pbsv_14062:HG4_Ill_Spiral_1096:HG4_PB_pbsv_14028:HG2_PB_PB10Xdip_8911:HG2_PB_HySA_25614:HG2_PB_SVrefine2PB10Xhap12_10148:HG4_PB_HySA_20466:HG3_PB_SVrefine2Falcon1Dovetail_8495:HG4_PB_SVrefine2PBcRDovetail_7009:HG4_Ill_SVrefine2DISCOVARDovetail_9953;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9765;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0758824;ClusterMaxSizeDiff=0.0752941;ClusterMaxEditDist=0.233759;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=1665;DistBack=4547;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=80;REFWIDENED=13:50460724-50460803;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9988;PctRecOverlap=0.997;SizeDiff=-2;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=1434.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:0|1:29:0:0:22:1|0:0:14:31:0:0/1:15:11:0/1:57:128:.:1674:.
chr13	51036153	HG4_Ill_GATKHC_22432	T	TATATATGTGTATATGTGCATATATACACAATATATGTGTATATGTGCATATATACACA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9768:HG4_PB_pbsv_14031:HG2_Ill_breakscan11_4481:HG2_PB_pbsv_14063:HG4_Ill_svaba_17566:HG2_PB_HySA_25619:HG4_Ill_manta_3296:HG4_Ill_Krunchall_19417:HG4_Ill_GATKHC_22432:HG4_Ill_GATKHCSBGrefine_9667:HG4_Ill_250bpfermikitraw_18522:HG4_Ill_150bpfermikitraw_17835:HG2_Ill_svaba_17525:HG2_Ill_Krunchall_19096:HG2_Ill_GATKHC_22458:HG2_Ill_GATKHCSBGrefine_9363:HG2_Ill_FB_12096:HG2_Ill_250bpfermikitraw_18765:HG2_Ill_150bpfermikitraw_17695:HG4_Ill_SVrefine2DISCOVARDovetail_9956:HG2_PB_SVrefine2Falcon1plusDovetail_2980:HG2_Ill_SVrefine2DISCOVARplusDovetail_3299;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17695:HG2_Ill_250bpfermikitraw_18765:HG2_Ill_FB_12096:HG2_Ill_GATKHCSBGrefine_9363:HG2_Ill_GATKHC_22458:HG2_Ill_Krunchall_19096:HG2_Ill_svaba_17525:HG4_Ill_150bpfermikitraw_17835:HG4_Ill_250bpfermikitraw_18522:HG4_Ill_GATKHCSBGrefine_9667:HG4_Ill_GATKHC_22432:HG4_Ill_Krunchall_19417:HG4_Ill_manta_3296:HG4_Ill_svaba_17566;NumExactMatchSVs=14;ClusterMaxShiftDist=0.137931;ClusterMaxSizeDiff=0.137931;ClusterMaxEditDist=0.310345;PBcalls=4;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=58;DistBack=-37;DistForward=-1;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=67;REFWIDENED=13:51036124-51036190;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1435.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:24:0|1:23:5:2:19:./.:1:25:29:2:0/1:27:30:./.:.:.:.:.:.
chr13	51645024	HG2_10X_SVrefine210Xhap12_9770	T	TGAAGTAGGCACTCGAGCTTTGTTCATTTTACAGTTAGGAAGCTGGGGCTGGGAGCAGGCGAGTAGCACATTCAAGGCCATCCAGCCGGTGGGTGGAGGAACCAAGATTCAAGCCAGACCTCCTGCCTACA	20	PASS	ClusterIDs=HG4_PB_pbsv_14033:HG2_PB_pbsv_14065:HG2_PB_HySA_25621:HG4_PB_SVrefine2PBcRDovetail_7011:HG4_Ill_svaba_17568:HG4_Ill_manta_3297:HG4_Ill_SVrefine2DISCOVARDovetail_9959:HG4_Ill_MetaSV_1329:HG4_Ill_GATKHCSBGrefine_9668:HG4_Ill_Cortex_916:HG4_Ill_250bpfermikitraw_18524:HG4_Ill_150bpfermikitraw_17837:HG2_PB_SVrefine2Falcon2Bionano_6995:HG2_Ill_svaba_17527:HG2_Ill_manta_3876:HG2_Ill_SpiralSDKrefine_4301:HG2_Ill_MetaSV_1244:HG2_Ill_GATKHCSBGrefine_9365:HG2_Ill_Cortex_2193:HG2_10X_SVrefine210Xhap12_9770:HG2_Ill_breakscan11_4482;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9770:HG2_Ill_Cortex_2193:HG2_Ill_GATKHCSBGrefine_9365:HG2_Ill_MetaSV_1244:HG2_Ill_SpiralSDKrefine_4301:HG2_Ill_manta_3876:HG2_Ill_svaba_17527:HG2_PB_SVrefine2Falcon2Bionano_6995:HG4_Ill_150bpfermikitraw_17837:HG4_Ill_250bpfermikitraw_18524:HG4_Ill_Cortex_916:HG4_Ill_GATKHCSBGrefine_9668:HG4_Ill_MetaSV_1329:HG4_Ill_SVrefine2DISCOVARDovetail_9959:HG4_Ill_manta_3297:HG4_Ill_svaba_17568:HG4_PB_SVrefine2PBcRDovetail_7011;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0674157;ClusterMaxSizeDiff=0.0524345;ClusterMaxEditDist=0.153846;PBcalls=5;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=130;DistBack=28013;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=13:51645025-51645026;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:32:0:0:28:1|0:0:46:23:0:0/1:36:11:./.:.:.:.:.:.
chr13	51735261	HG2_PB_SVrefine2PB10Xhap12_10152	T	TAAAAGTAGTTTTTCTCCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCATGCCTAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTTTTTTTTTGGTGGAGATGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCTGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATATGAGGAGCCCCTCTGCCTGGCTGCCCAGTGTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGAAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCACCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAACCCTGTCTGGGAGGTGAGGAGTGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCTGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCCGGGGGGGGGTGGGGGTCGGCCAGCCGCCCCGGCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAACCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGACGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGCCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGAACAGCCCCCCGCCCGGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGCGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCTGGGAGGTGAGGGGCACTTCTGCCGGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAATAAAAAATAAAAAAAAAAATAAATAAATAAATAAAAAAAAAAAGAAAAAAAAAAAAAGAATTTAACTACAAAACAAATAAAGCTTTCCCCTCTTAAAAAAAAAAAACAAAAAAAAAAAACAAAAAAAAACAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4483:HG2_PB_HySA_25623:HG3_PB_pbsv_13754:HG2_PB_pbsv_14067:HG4_PB_HySA_20473:HG2_PB_assemblyticsPBcR_6665:HG2_PB_HySA_25622:HG4_PB_SVrefine2PBcRDovetail_7013:HG3_PB_SVrefine2Falcon1Dovetail_8500:HG2_PB_SVrefine2Falcon1plusDovetail_2983:HG2_PB_SVrefine2Falcon2Bionano_6997:HG2_PB_SVrefine2PB10Xhap12_10152:HG3_PB_SVrefine2PBcRDovetail_6627:HG3_PB_HySA_21188:HG4_PB_pbsv_14035:HG2_PB_PB10Xdip_8916:HG2_PB_PB10Xdip_8915;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10152;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0391;ClusterMaxSizeDiff=0.0383622;ClusterMaxEditDist=0.176154;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=2706;DistBack=82826;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:51735262-51735277;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9996;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1438.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:103:1/1:0:6:0:7:1/1:0:7:0:5:1/1:0:8:1/1:7:515:.:2649:.
chr13	51922815	HG2_Ill_SVrefine2DISCOVARplusDovetail_3303	G	GAATGGAGCCCCCCAGGACCCCCTGATCCAGCCCTAGGCTGGACCAGTTTTTGGAAAGGAAATGCTCGTGGTTCCCTTGTAGGAACGTTGCCCAAATCTTATCCCATCCTAAGAGTATACAACTGTCATTTTCCCAAAACCAAAGAGATAAGATGACTTATGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6998:HG4_PB_HySA_20474:HG2_10X_SVrefine210Xhap12_9772:HG2_PB_PB10Xdip_8917:HG4_PB_pbsv_14036:HG2_PB_HySA_25624:HG3_PB_pbsv_13756:HG3_Ill_250bpfermikitraw_18235:HG2_PB_pbsv_14068:HG3_PB_HySA_21191:HG3_PB_SVrefine2Falcon1Dovetail_8501:HG2_PB_SVrefine2PB10Xhap12_10153:HG3_PB_SVrefine2PBcRDovetail_6629:HG2_Ill_SVrefine2DISCOVARplusDovetail_3303;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3303:HG3_PB_SVrefine2PBcRDovetail_6629;NumExactMatchSVs=2;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.268657;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=162;DistBack=47272;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=170;REFWIDENED=13:51922816-51922985;PctSeqSimilarity=0.9916;PctSizeSimilarity=0.9939;PctRecOverlap=0.908;SizeDiff=-1;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=96;MatchId=1439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:36:0|1:17:1:0:25:./.:2:0:1:14:0/1:18:11:./.:.:.:.:.:.
chr13	52576740	HG4_PB_HySA_20479	A	AAAGGGGAAAGGGGGGGAGGGGAGGGGAGGAGCGGGGAGGGGAGGAGAAGGGAGGAAGGGGGGGAAGGGACAGGAGGGAAGGGGAGGGGGATAACAGAAGGTAGGGAGGGGAGGGGGAAGGAAAGGAAGGAAGGAGGGAGGGAGGGAGGG	20	PASS	ClusterIDs=HG2_PB_pbsv_14072:HG2_PB_PB10Xdip_8919:HG4_PB_HySA_20479:HG4_Ill_MetaSV_1332:HG2_PB_SVrefine2Falcon1plusDovetail_2986:HG2_Ill_SVrefine2DISCOVARplusDovetail_3307:HG2_PB_HySA_25627:HG3_PB_SVrefine2Falcon1Dovetail_8504:HG3_PB_HySA_21195:HG3_PB_pbsv_13758:HG2_10X_SVrefine210Xhap12_9774:HG4_PB_SVrefine2PBcRDovetail_7016:HG2_PB_SVrefine2PB10Xhap12_10155:HG3_PB_SVrefine2PBcRDovetail_6630:HG2_PB_SVrefine2Falcon2Bionano_7000:HG4_PB_pbsv_14040:HG2_PB_assemblyticsPBcR_6671;NumClusterSVs=17;ExactMatchIDs=HG4_PB_HySA_20479;NumExactMatchSVs=1;ClusterMaxShiftDist=0.334545;ClusterMaxSizeDiff=0.334545;ClusterMaxEditDist=0.360294;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=149;DistBack=-1;DistForward=9086;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=13:52576741-52576740;PctSeqSimilarity=0.9732;PctSizeSimilarity=0.9732;PctRecOverlap=0.9732;SizeDiff=4;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=97;MatchId=1440.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:1:23:1:27:./.:2:3:1:11:./.:1:13:./.:.:.:.:.:.
chr13	53034588	HG3_Ill_SVrefine2DISCOVARDovetail_10098	A	ATTTTTTTTTGAGACAGAGTCTCTCTCTGTCACCCAGGCTGGAGTGCAGTGGCTCGATCTTGGCTCACTGCGAACTCCGCCTCCCGGGTTCATGCCATTCTCCTTCCTCAGCCTCCCTAGTAGCTGGGACTACAGGACTACAAGCGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGTCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTTTACACTGTTAAAAATAATTAAAAGTTTTGCTTAGGGCTGGGCGTGATGGCTCACACTTGTAATCACAGCACTTTGGGAGGCCAGTGTAGGCAGATCACCTCAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAATCCTGTCTCTATTAAAAATACAAAAATTAGCTGGGTGAGGTGGCGTGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAAACTCTCTTGAAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAATTTGCTTAGGACAAATTTCTTTTTTTTTTCTTTTTTTTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8549:HG3_PB_pbsv_13759:HG2_PB_pbsv_14073:HG3_PB_HySA_21197:HG4_Ill_MetaSV_1333:HG4_Ill_GATKHCSBGrefine_9671:HG2_Ill_MetaSV_1245:HG2_PB_PB10Xdip_8930:HG2_PB_PB10Xdip_8929:HG2_PB_HySA_25633:HG4_PB_HySA_20484:HG3_PB_SVrefine2PBcRDovetail_6631:HG3_Ill_SVrefine2DISCOVARDovetail_10098:HG2_PB_SVrefine2PB10Xhap12_10158:HG2_Ill_SVrefine2DISCOVARplusDovetail_3308:HG2_PB_SVrefine2Falcon1plusDovetail_2987;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3308:HG2_PB_SVrefine2PB10Xhap12_10158:HG3_Ill_SVrefine2DISCOVARDovetail_10098:HG3_PB_SVrefine2PBcRDovetail_6631;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0587803;ClusterMaxSizeDiff=0.0573108;ClusterMaxEditDist=0.172694;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=672;DistBack=48036;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=13:53034589-53034886;PctSeqSimilarity=0.9749;PctSizeSimilarity=0.9851;PctRecOverlap=0.6211;SizeDiff=10;StartDistance=-250;EndDistance=-250;GTMatch=0;TruScore=86;MatchId=1441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:44:./.:0:0:0:0:./.:0:1:0:1:1/1:0:12:./.:5:87:.:.:.
chr13	53433776	HG2_PB_SVrefine2PB10Xhap12_10159	T	TGAAGTGGATAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4484:HG2_PB_HySA_25641:HG3_PB_pbsv_13760:HG2_Ill_MetaSV_1246:HG4_PB_pbsv_14044:HG2_PB_pbsv_14074:HG2_PB_SVrefine2PBcRplusDovetail_2824:HG2_PB_assemblyticsPBcR_6674:HG2_PB_assemblyticsfalcon_6920:HG2_PB_SVrefine2PB10Xhap12_10159:HG2_PB_SVrefine2Falcon2Bionano_7001:HG4_PB_SVrefine2Falcon1Dovetail_8552:HG2_PB_SVrefine2Falcon1plusDovetail_2988:HG4_Ill_MetaSV_1335:HG2_10X_SVrefine210Xhap12_9779:HG4_PB_HySA_20486:HG2_PB_PB10Xdip_8932:HG2_PB_PB10Xdip_8931;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7001:HG2_PB_SVrefine2PB10Xhap12_10159:HG2_PB_SVrefine2PBcRplusDovetail_2824;NumExactMatchSVs=3;ClusterMaxShiftDist=0.193939;ClusterMaxSizeDiff=0.193939;ClusterMaxEditDist=0.232012;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=323;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:53433777-53433792;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:./.:0:0:0:0:./.:0:4:0:1:1/1:0:13:1/1:2:62:.:.:.
chr13	55511731	HG4_Ill_GATKHCSBGrefine_9673	G	GAGGTTTGGGGGGAGTGTTGGCAGTACCAATAAGATTTTTGGGGCAGTTTGTCCCTA	20	PASS	ClusterIDs=HG2_PB_HySA_25655:HG3_PB_pbsv_13765:HG2_PB_PB10Xdip_8941:HG2_PB_PB10Xdip_8940:HG4_Ill_svaba_17583:HG4_Ill_scalpel_12966:HG4_Ill_manta_3298:HG4_Ill_Krunchall_19436:HG4_Ill_GATKHC_22459:HG4_Ill_GATKHCSBGrefine_9673:HG4_Ill_250bpfermikitraw_18543:HG4_Ill_150bpfermikitraw_17853:HG3_Ill_svaba_17702:HG3_Ill_scalpel_13519:HG3_Ill_manta_3172:HG3_Ill_Spiral_14623:HG3_Ill_Krunchall_18747:HG3_Ill_GATKHC_22357:HG3_Ill_GATKHCSBGrefine_9284:HG3_Ill_250bpfermikitraw_18251:HG3_Ill_150bpfermikitraw_17747:HG2_PB_assemblyticsfalcon_6930:HG2_PB_assemblyticsPBcR_6687:HG2_Ill_svaba_17538:HG2_Ill_scalpel_13259:HG2_Ill_manta_3878:HG2_Ill_SpiralSDKrefine_4314:HG2_Ill_Krunchall_19111:HG2_Ill_GATKHC_22477:HG2_Ill_GATKHCSBGrefine_9369:HG2_Ill_250bpfermikitraw_18783:HG2_Ill_150bpfermikitraw_17712:HG3_PB_assemblyticsfalcon_6931;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17712:HG2_Ill_250bpfermikitraw_18783:HG2_Ill_GATKHCSBGrefine_9369:HG2_Ill_GATKHC_22477:HG2_Ill_Krunchall_19111:HG2_Ill_SpiralSDKrefine_4314:HG2_Ill_manta_3878:HG2_Ill_scalpel_13259:HG2_Ill_svaba_17538:HG2_PB_assemblyticsPBcR_6687:HG2_PB_assemblyticsfalcon_6930:HG3_Ill_150bpfermikitraw_17747:HG3_Ill_250bpfermikitraw_18251:HG3_Ill_GATKHCSBGrefine_9284:HG3_Ill_GATKHC_22357:HG3_Ill_Krunchall_18747:HG3_Ill_Spiral_14623:HG3_Ill_manta_3172:HG3_Ill_scalpel_13519:HG3_Ill_svaba_17702:HG4_Ill_150bpfermikitraw_17853:HG4_Ill_250bpfermikitraw_18543:HG4_Ill_GATKHCSBGrefine_9673:HG4_Ill_GATKHC_22459:HG4_Ill_Krunchall_19436:HG4_Ill_manta_3298:HG4_Ill_scalpel_12966:HG4_Ill_svaba_17583;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.157895;PBcalls=7;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=13:55511730-55511733;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1444.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:44:./.:0:0:0:0:1/1:0:11:0:16:1/1:0:57:./.:.:.:.:.:.
chr13	56186559	HG2_Ill_GATKHCSBGrefine_9374	T	TTAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGCGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGAGCCCGCCACCGCTCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_21219:HG2_PB_assemblyticsfalcon_6938:HG3_PB_pbsv_13770:HG3_PB_HySA_21220:HG3_PB_assemblyticsfalcon_6939:HG2_Ill_MetaSV_1250:HG2_PB_pbsv_14083:HG2_Ill_GATKHCSBGrefine_9374:HG2_PB_SVrefine2Falcon1plusDovetail_2994:HG3_PB_SVrefine2PBcRDovetail_6638:HG3_PB_SVrefine2Falcon1Dovetail_8510:HG3_Ill_MetaSV_1378:HG3_Ill_GATKHCSBGrefine_9289;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9374:HG2_Ill_MetaSV_1250;NumExactMatchSVs=2;ClusterMaxShiftDist=0.1696;ClusterMaxSizeDiff=0.1696;ClusterMaxEditDist=0.272727;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=31721;DistForward=31961;DistMin=31721;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=13:56186560-56186576;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1445.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:58:33:0|1:48:6:0:21:./.:0:4:22:0:0/1:24:13:0/1:6:32:.:.:.
chr13	57909004	HG4_Ill_250bpfermikitraw_18567	T	TACACATATATATACATATATGTGTGTGTGTGTTAATATATATACACATATATATTATATATGTGTATATATATTAACACACAC	20	PASS	ClusterIDs=HG2_PB_HySA_25678:HG4_PB_HySA_20517:HG3_Ill_manta_3176:HG4_Ill_manta_3302:HG4_Ill_250bpfermikitraw_18567:HG4_Ill_150bpfermikitraw_17875;NumClusterSVs=6;ExactMatchIDs=HG4_Ill_150bpfermikitraw_17875:HG4_Ill_250bpfermikitraw_18567:HG4_Ill_manta_3302;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0578035;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=83;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=13:57909005-57909017;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:0:15:2:13:./.:12:10:13:18:0/1:11:31:./.:.:.:.:.:.
chr13	58621051	HG4_Ill_manta_3304	C	CAAAATGAATAATATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTG	20	PASS	ClusterIDs=HG4_PB_HySA_20523:HG2_PB_pbsv_14096:HG2_PB_HySA_25690:HG3_PB_pbsv_13780:HG4_PB_SVrefine2PBcRDovetail_7034:HG4_PB_pbsv_14065:HG4_Ill_manta_3304:HG3_PB_assemblyticsfalcon_6965:HG2_PB_assemblyticsfalcon_6972:HG4_PB_assemblyticsfalcon_6871:HG4_Ill_MetaSV_1343:HG4_Ill_GATKHCSBGrefine_9693:HG3_Ill_MetaSV_1381:HG3_Ill_GATKHCSBGrefine_9299:HG2_Ill_MetaSV_1255:HG2_Ill_GATKHCSBGrefine_9391:HG2_Ill_manta_3886:HG3_PB_SVrefine2Falcon1Dovetail_8517:HG2_PB_SVrefine2Falcon1plusDovetail_3004:HG2_PB_SVrefine2Falcon2Bionano_7012:HG4_PB_SVrefine2Falcon1Dovetail_8566:HG2_10X_SVrefine210Xhap12_9801;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9391:HG2_Ill_MetaSV_1255:HG3_Ill_GATKHCSBGrefine_9299:HG3_Ill_MetaSV_1381:HG4_Ill_GATKHCSBGrefine_9693:HG4_Ill_MetaSV_1343:HG4_Ill_manta_3304:HG4_PB_SVrefine2PBcRDovetail_7034;NumExactMatchSVs=8;ClusterMaxShiftDist=0.151203;ClusterMaxSizeDiff=0.151203;ClusterMaxEditDist=0.254545;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=292;DistBack=40129;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:58621052-58621066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1448.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:20:./.:2:8:19:7:0|1:19:0:0:6:0/1:22:11:./.:.:.:.:.:.
chr13	58915321	HG2_PB_SVrefine2PBcRplusDovetail_2838	A	AATGTCTTTTTCCACCTCCTCTTTAAGGCCAATATCTCTTAGATTTGCCCTTTTGAGGCTATCTTTTAGATTCTATGGATCTATTTCATTGCTTTCTATTCTTTTTTCTTTTGTCTCCTCTGACTGTGTATTTTCAAATAGCCTGTCTTCAATCTCACTAATTCTTTCTTCTGCTTGACCAACTCTACTATTAAAAGACACTGATATATTCTTCAGCATGCCTATTGCATTTTTTCAGCTCTAGATTTTCTACTTGATTTTTAATTATTTCAATCTCTTTGTTAAATCTATCTGATAGAATTCTGAATTCCTTCTCTGTGTTATCTTGAATTTCTTTGAGTTTACTCAATGTAGTTATTTTGAATTCTCTGCCTGAAAGGTCACATATCTCTGTTTCTCCAGGATTAGTCCCTGGTGCCACTTAGTGCAGTTGGTGAGGTCATGTTTTTCTGGATGGTGTTGATGCTAGTAAGTGCTTTTCCGTGTCTGAGCATTAAAGAGTTAGGTATTTATTGTAATCTTCACTGTCTGGGTTTATTTGTAGCCATCCTTCTTGGAAAGGCTTTCCAGATATTTGAAAGAACTTGGTTGTTGTGATCTAAGCTGTATCTGCTTCAGGGGGCACCCCAAGTCCTGTAATTGTAGTTCTCGCAGACTCATAAAGGTACTGCCTTGATGGTCTTAAATAAGATCGAGGAGAATTCTTTGGATTACCAGGCAGAAACCCTTGTTCTCTTCCCTTAACTTCTCCCAAACATACAGTCTCTCTCTCTCTCTATTTTGAGCCACCTAAAGTTGGAGGTGAAGTAACACAAGCACTCCTGTGGCCACCACCACTATGATGGCACTGAGTCAGAAGTGAAGTCGGTACAGTGCTAGGTCTTGCCCAAGGCCTGCTGTAACCACTCCCTAGCTGCTGCCTATGTTCGCTCAAGGTACTGGGGCTCTACCATCAGCAGGTTGCAAAGCCAGCCAGACCTGCATCTTTCCCTTTAGGGCAGTGAGGTCCCCCAGGCCCTGATTCGGTCAAGGAGTGCCATAGAGGGGTCAGGGACCCATGTCTAAAACCTTTAGAAGTCTACCTGGTGAGCCGGGTGTTGTGGCTTACGCATGTAATCACATCACTTTGGGAGGCCAAGGCAGGTGTATCACTTGAATCCAGGAGTTCAAGACCAGCCTGGGCAACGTGGAAAAACCCTATCTCTACAACAAATACAAAAAAAATGTTAGCCAGATGTGGTGGCACATGCCTGTAGTCCCAGCTACTAAGGAGGTCGAGGTGCAAGGAGAGTTTCAGTCCAGGAGGTCGAGGCAGCAGTGAGCCGTGGTTGTGTCACTGCACTCCAGCCTGGGCAACAGAACAACATCCTGTCTTTAAATAAATAAATAAGTAAATAAGTAGTCTACTTGGTGTTCTATTGTACTGCAGCTGAGCTGGCACTCAAACCACAGGGTACAGTCCTTCCCACTCTTTCCTTGCATTTCCAAAGGCAGAGGAGCCTAACCACCACTATACCACCACCCCAGGCCACAAGTAATATTGCCAGACAACCACTGACATTCCCATAAGGCCCATAGGCTCTTAAGTCAGCTTGTTGTGAGTGCTGCCTGGGCTGGGACTCACTTTTCAGGGCAGTGGTCTCCCCTCTGTCCCATGGCAGGTCCAGAAATGCTGTCCAAGTATCATGTCCGGGAATTGGGAACCCCATGGGCCCCATGATGCTCTACCCCTCTGTGGCAGTGTTGGAACCTAAGGTGCAAGACAAAGTCCCCTTTACTTTCCCCTCTTTCAGCAATATGAAATGAAAACCAAGTACTATGAGTGCTCACCTGATTTTTGGTTCTTATGAAGGTGTTTTTTCTGTATAGATACTTATTAACTGAGTGTTTTTGCTGGGGAGATGATCAGTGGAGTCTTCTATTTCACCATGTTGCTCTGCCTCCTCCTCAATTGTCAATGTTTTGTTAAAGTATAAATGTACATAGAGATGAACTTTTTGGCTGAATGCCAAATGGATGAATCGAAAAATTAATATTTATATAAAACCCAGGATGAAGACAGATCTCATCATACAACAAACTCAGAGACTGAAGGATAAAGTTAATGTCATACAAAACTTAACAATTACTAACATTGATAATCTATTACTAACACAGTAGTAGTTGATTGCTTTTTTTTTTTTAAAAAATGACATTATAACAGAGAGACAATAATTTCTCAGATCTAATAGATTCTGGAATGCTTCTCTCTTTCCTATACTGAATGTTCACAATTCTAAAAGAATGATGATTTTTTATCTGAGGTCAATTATAAAATGAATTATGTTTTTGGTTAGCTCTGCTTACACGGGATACTGCTTATGGTTATGTTATCACCAAAGCATTACGATCTCCTTTCTCTTTCACAGTACGTGATTTACAGAAAGGCTGTTTTTTTTTAAAGATAGTAATACATAGCAATTCCCACAAAATTTATATTATCTAATAAATATTCTCACGTCAAAATGGATGACATACCCTTCCCAAATATATTGAGCTAATATGTTCTAACATTTGTATAAATTGTCAACCTAATTTTCGCTAGATATTTGTATGAACTGTCAGCCTTGAGAATATTTTTCAATATTCTCAACTCCTTTTAAGTTAATTACTAATATTTTTGGTACAGAAAATTATCAGTGATTGATATC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8567:HG2_PB_PB10Xdip_8959:HG2_Ill_breakscan11_4486:HG4_PB_HySA_20525:HG3_PB_SVrefine2Falcon1Dovetail_8518:HG2_PB_SVrefine2Falcon2Bionano_7013:HG2_PB_SVrefine2Falcon1plusDovetail_3005:HG4_PB_SVrefine2PBcRDovetail_7035:HG2_PB_SVrefine2PB10Xhap12_10179:HG3_PB_SVrefine2PBcRDovetail_6645:HG3_Ill_SVrefine2DISCOVARDovetail_10118:HG2_PB_SVrefine2PBcRplusDovetail_2838:HG2_Ill_SVrefine2DISCOVARplusDovetail_3334:HG2_10X_SVrefine210Xhap12_9802:HG2_PB_HySA_25692:HG3_PB_HySA_21248;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9802:HG2_Ill_SVrefine2DISCOVARplusDovetail_3334:HG2_PB_SVrefine2PBcRplusDovetail_2838:HG3_Ill_SVrefine2DISCOVARDovetail_10118:HG3_PB_SVrefine2PBcRDovetail_6645;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0280961;ClusterMaxSizeDiff=0.0280961;ClusterMaxEditDist=0.0414048;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=2689;DistBack=3589;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=13:58915322-58915323;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:62:0|1:36:4:0:35:1|0:0:16:48:0:0/1:26:21:0/1:97:215:.:2216:.
chr13	59377680	HG2_PB_pbsv_14102	C	CCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTCCCGCCCAGGCTGGAGTGCAGTGGGCGGGATCTCGGCTCACTGCAAGCTCGCTACCCGGGTTCACGCCATTCTCCTGCCCTCAGCCCACAAGTAGCTGGGACCTACAGCGCCCGACACTACGCGCTCGGCTAATTTTTGTTTGTTAATTTTTTAGTAGCAGACGGGGTTTTCACCGTTTTTAGCCGGATGGTCCTCAGAATATCTGACCTTGTGATCCCGCCCGCCTCGGCCTCCCAAAGTGCTTGGATTACAGCGTGAGCCCACCGCGCGCCGGCCTGGGGTCT	20	PASS	ClusterIDs=HG4_PB_pbsv_14070:HG2_PB_pbsv_14102:HG2_PB_assemblyticsPBcR_6729:HG2_PB_SVrefine2PBcRplusDovetail_2839:HG2_PB_assemblyticsfalcon_6977:HG4_PB_assemblyticsfalcon_6877:HG4_Ill_GATKHCSBGrefine_9696:HG2_PB_SVrefine2Falcon1plusDovetail_3006:HG2_PB_HySA_25696:HG4_PB_HySA_20531;NumClusterSVs=10;ExactMatchIDs=HG2_PB_pbsv_14102;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147567;ClusterMaxSizeDiff=0.147567;ClusterMaxEditDist=0.200942;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=335;DistBack=50;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=13:59377681-59377680;PctSeqSimilarity=0.9421;PctSizeSimilarity=0.9463;PctRecOverlap=0.9433;SizeDiff=18;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=94;MatchId=1450.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:31:./.:10:20:13:8:0|1:30:0:1:9:0/1:36:9:0/1:11:12:.:.:.
chr13	59396879	HG2_Ill_GATKHCSBGrefine_9395	T	TGAGTGTTACAGTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_20532:HG4_PB_HySA_20533:HG2_PB_pbsv_14103:HG3_PB_pbsv_13784:HG2_PB_PB10Xdip_8962:HG4_PB_pbsv_14071:HG4_PB_assemblyticsfalcon_6879:HG2_PB_assemblyticsPBcR_6731:HG2_PB_assemblyticsfalcon_6979:HG3_PB_assemblyticsfalcon_6974:HG2_Ill_MetaSV_1257:HG3_PB_SVrefine2Falcon1Dovetail_8521:HG3_PB_HySA_21252:HG3_PB_SVrefine2PBcRDovetail_6647:HG3_Ill_GATKHCSBGrefine_9304:HG3_Ill_MetaSV_1383:HG2_10X_SVrefine210Xhap12_9806:HG4_PB_SVrefine2PBcRDovetail_7038:HG4_Ill_manta_3305:HG4_Ill_SVrefine2DISCOVARDovetail_9985:HG4_Ill_MetaSV_1346:HG4_Ill_GATKHCSBGrefine_9697:HG3_Ill_SVrefine2DISCOVARDovetail_10119:HG2_PB_SVrefine2PB10Xhap12_10180:HG2_PB_SVrefine2Falcon2Bionano_7015:HG2_Ill_SVrefine2DISCOVARplusDovetail_3336:HG2_Ill_GATKHCSBGrefine_9395:HG4_PB_SVrefine2Falcon1Dovetail_8570:HG2_PB_SVrefine2PBcRplusDovetail_2840:HG2_PB_SVrefine2Falcon1plusDovetail_3007:HG2_PB_HySA_25698;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9395:HG2_Ill_SVrefine2DISCOVARplusDovetail_3336:HG2_PB_SVrefine2Falcon2Bionano_7015:HG2_PB_SVrefine2PB10Xhap12_10180:HG3_Ill_SVrefine2DISCOVARDovetail_10119:HG4_Ill_GATKHCSBGrefine_9697:HG4_Ill_MetaSV_1346:HG4_Ill_SVrefine2DISCOVARDovetail_9985:HG4_Ill_manta_3305:HG4_PB_SVrefine2PBcRDovetail_7038;NumExactMatchSVs=10;ClusterMaxShiftDist=0.157729;ClusterMaxSizeDiff=0.157729;ClusterMaxEditDist=0.201893;PBcalls=20;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=316;DistBack=7681;DistForward=254;DistMin=254;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:59396880-59396895;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:25:0:20:1/1:0:11:0:10:1/1:0:21:1/1:2:81:.:.:.
chr13	60465036	HG4_PB_HySA_20541	T	TATAAAACTGAACTTTACGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_25706:HG2_PB_pbsv_14106:HG4_PB_HySA_20541:HG4_PB_pbsv_14074:HG2_Ill_breakscan11_4488:HG4_PB_SVrefine2PBcRDovetail_7041;NumClusterSVs=6;ExactMatchIDs=HG4_PB_HySA_20541;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0958084;ClusterMaxSizeDiff=0.0778443;ClusterMaxEditDist=0.208999;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=328;DistBack=-1;DistForward=6;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=13:60465037-60465037;PctSeqSimilarity=0.9954;PctSizeSimilarity=0.997;PctRecOverlap=0.9939;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1452.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:37:0|1:20:6:3:20:./.:37:0:2:7:0/1:25:14:0/1:13:31:.:.:.
chr13	60611168	HG4_Ill_svaba_17618	C	CAAAGATAAAAAAAATCATAGAATCAGACAAAGAGAAAAGGCAGATTAGCTGGAAAGGAATCAGTTTTACTAAACGCCAAGTTCTCAAAAATAGCAATGAAAGCCAGAAGAGAAAATAGGGTCTTCAATGTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4489:HG2_PB_pbsv_14107:HG3_PB_pbsv_13787:HG3_PB_assemblyticsfalcon_6981:HG4_PB_pbsv_14075:HG3_PB_SVrefine2Falcon1Dovetail_8524:HG4_PB_assemblyticsfalcon_6884:HG4_PB_SVrefine2Falcon1Dovetail_8573:HG4_Ill_svaba_17618:HG4_Ill_manta_3307:HG4_Ill_SVrefine2DISCOVARDovetail_9993:HG4_Ill_MetaSV_1349:HG4_Ill_GATKHCSBGrefine_9699:HG4_Ill_Cortex_928:HG3_Ill_svaba_17749:HG3_Ill_manta_3181:HG3_Ill_Spiral_14664:HG3_Ill_SVrefine2DISCOVARDovetail_10124:HG3_Ill_MetaSV_1386:HG3_Ill_GATKHCSBGrefine_9307:HG3_Ill_Cortex_982:HG3_Ill_250bpfermikitraw_18300:HG3_Ill_150bpfermikitraw_17798:HG2_PB_assemblyticsfalcon_6986:HG2_PB_assemblyticsPBcR_6739:HG2_Ill_svaba_17583:HG2_Ill_manta_3889:HG2_Ill_SpiralSDKrefine_4347:HG2_Ill_SVrefine2DISCOVARplusDovetail_3342:HG2_Ill_MetaSV_1260:HG2_Ill_GATKHCSBGrefine_9397:HG2_Ill_Cortex_2213:HG2_10X_SVrefine210Xhap12_9810:HG4_PB_SVrefine2PBcRDovetail_7042:HG3_PB_SVrefine2PBcRDovetail_6649:HG2_PB_SVrefine2PBcRplusDovetail_2844:HG2_PB_SVrefine2PB10Xhap12_10184:HG2_PB_SVrefine2Falcon2Bionano_7018:HG2_PB_SVrefine2Falcon1plusDovetail_3010:HG2_PB_PB10Xdip_8966:HG2_PB_PB10Xdip_8965;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9810:HG2_Ill_Cortex_2213:HG2_Ill_GATKHCSBGrefine_9397:HG2_Ill_MetaSV_1260:HG2_Ill_SVrefine2DISCOVARplusDovetail_3342:HG2_Ill_SpiralSDKrefine_4347:HG2_Ill_manta_3889:HG2_Ill_svaba_17583:HG2_PB_assemblyticsPBcR_6739:HG2_PB_assemblyticsfalcon_6986:HG3_Ill_150bpfermikitraw_17798:HG3_Ill_250bpfermikitraw_18300:HG3_Ill_Cortex_982:HG3_Ill_GATKHCSBGrefine_9307:HG3_Ill_MetaSV_1386:HG3_Ill_SVrefine2DISCOVARDovetail_10124:HG3_Ill_Spiral_14664:HG3_Ill_manta_3181:HG3_Ill_svaba_17749:HG4_Ill_Cortex_928:HG4_Ill_GATKHCSBGrefine_9699:HG4_Ill_MetaSV_1349:HG4_Ill_SVrefine2DISCOVARDovetail_9993:HG4_Ill_manta_3307:HG4_Ill_svaba_17618:HG4_PB_SVrefine2Falcon1Dovetail_8573:HG4_PB_assemblyticsfalcon_6884;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0814815;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.234432;PBcalls=17;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=131;DistBack=19968;DistForward=4071;DistMin=4071;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=13:60611169-60611168;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:0:25:0:22:1/1:0:41:0:38:1/1:0:20:./.:.:.:.:.:.
chr13	60829446	HG2_PB_PB10Xdip_8968	T	TCCCTCCCCTCCTCCTCCCCTCCCCCTCCCCTCCCCCCCCTCCCCTCCCCCTCCC	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_6741:HG3_PB_HySA_21261:HG2_PB_PB10Xdip_8967:HG2_PB_PB10Xdip_8968:HG2_PB_assemblyticsfalcon_6989;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_8968;NumExactMatchSVs=1;ClusterMaxShiftDist=0.291667;ClusterMaxSizeDiff=0.291667;ClusterMaxEditDist=0.291667;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=54;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=13:60829445-60829448;PctSeqSimilarity=0.866;PctSizeSimilarity=0.7593;PctRecOverlap=0.7455;SizeDiff=13;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=79;MatchId=1454.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:8:38:1/1:6:19:2:12:./.:0:2:1:5:./.:0:2:./.:.:.:.:.:.
chr13	61162456	HG2_Ill_GATKHCSBGrefine_9401	T	TTTAAATGAACTGTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_pbsv_13790:HG3_PB_assemblyticsfalcon_6989:HG2_PB_pbsv_14111:HG2_PB_assemblyticsfalcon_6992:HG2_PB_HySA_25714:HG3_PB_HySA_21266:HG2_PB_SVrefine2Falcon1plusDovetail_3012:HG3_Ill_GATKHCSBGrefine_9310:HG2_Ill_manta_3892:HG2_Ill_MetaSV_1264:HG2_Ill_GATKHCSBGrefine_9401:HG3_PB_SVrefine2Falcon1Dovetail_8527;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9401:HG2_Ill_MetaSV_1264:HG2_Ill_manta_3892:HG3_Ill_GATKHCSBGrefine_9310;NumExactMatchSVs=4;ClusterMaxShiftDist=0.147567;ClusterMaxSizeDiff=0.147567;ClusterMaxEditDist=0.222222;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=28393;DistForward=12700;DistMin=12700;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:61162457-61162472;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:14:0|1:40:2:0:14:./.:0:2:23:0:0/1:26:13:./.:5:38:.:.:.
chr13	61734484	HG2_PB_SVrefine2Falcon2Bionano_7024	T	TAAGAGTTTGGGGATTTATACTCATTTGGGTATATACCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTTACAGTCCCACCAAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCACGCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAATGATGAGTTCATATCCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATCAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_pbsv_13798:HG3_PB_HySA_21278:HG2_PB_pbsv_14115:HG4_PB_pbsv_14084:HG4_PB_assemblyticsfalcon_6904:HG2_PB_assemblyticsPBcR_6754:HG2_PB_assemblyticsfalcon_7002:HG2_PB_PB10Xdip_8973:HG2_PB_PB10Xdip_8974:HG4_PB_SVrefine2Falcon1Dovetail_8580:HG2_PB_SVrefine2PB10Xhap12_10190:HG2_PB_SVrefine2PBcRplusDovetail_2850:HG2_PB_SVrefine2Falcon1plusDovetail_3016:HG3_PB_SVrefine2Falcon1Dovetail_8532:HG2_PB_SVrefine2Falcon2Bionano_7024:HG2_PB_HySA_25722;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7024;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0622222;ClusterMaxSizeDiff=0.0622222;ClusterMaxEditDist=0.217518;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1326;DistBack=38149;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=13:61734485-61734497;PctSeqSimilarity=0.9951;PctSizeSimilarity=0.997;PctRecOverlap=0.997;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:31:0:10:./.:0:4:0:9:1/1:0:22:1/1:16:315:.:1319:.
chr13	61787401	HG3_Ill_MetaSV_1391	T	TAAAATTTAATTATTTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGGGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCCTCTCAGAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_25724:HG2_PB_pbsv_14116:HG4_PB_assemblyticsfalcon_6905:HG3_PB_HySA_21279:HG2_PB_assemblyticsfalcon_7003:HG3_PB_SVrefine2Falcon1Dovetail_8533:HG3_PB_pbsv_13799:HG3_PB_SVrefine2PBcRDovetail_6652:HG3_Ill_MetaSV_1391:HG2_PB_SVrefine2Falcon1plusDovetail_3017:HG3_Ill_GATKHCSBGrefine_9316;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_MetaSV_1391:HG3_PB_SVrefine2PBcRDovetail_6652;NumExactMatchSVs=2;ClusterMaxShiftDist=0.139319;ClusterMaxSizeDiff=0.139319;ClusterMaxEditDist=0.241486;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=325;DistBack=23751;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=13:61787402-61787418;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:35:./.:14:13:7:29:1|0:0:12:24:0:0/1:14:10:0/1:9:24:.:.:.
chr13	62236797	HG3_Ill_GATKHCSBGrefine_9318	T	TATATGTGTATATATACATATATACATATATACATGTATATGTGTATATATACATATATACACATATACATGTATATGTGTATATATACATATATACATATATACATGTATATGTGTATATATACATATATACATATATACATATATATACATATACATATATATAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8536:HG3_PB_HySA_21281:HG3_Ill_GATKHC_22442:HG3_Ill_GATKHCSBGrefine_9318:HG2_Ill_GATKHC_22557:HG2_Ill_GATKHCSBGrefine_9411:HG3_PB_pbsv_13801:HG2_PB_pbsv_14120:HG3_PB_SVrefine2PBcRDovetail_6654:HG3_Ill_SVrefine2DISCOVARDovetail_10130:HG2_Ill_SVrefine2DISCOVARplusDovetail_3355:HG2_10X_SVrefine210Xhap12_9823;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9411:HG2_Ill_GATKHC_22557:HG3_Ill_GATKHCSBGrefine_9318:HG3_Ill_GATKHC_22442;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0467836;ClusterMaxEditDist=0.236994;PBcalls=5;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=166;DistBack=9;DistForward=57;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=162;REFWIDENED=13:62236710-62236871;PctSeqSimilarity=0.994;PctSizeSimilarity=0.9881;PctRecOverlap=0.9882;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:25:0|1:43:6:2:35:./.:5:15:25:2:0/1:28:12:./.:.:.:.:.:.
chr13	62588958	HG2_PB_SVrefine2Falcon1plusDovetail_3019	A	ACCGTTCATGTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_25732:HG2_PB_PB10Xdip_8978:HG2_PB_pbsv_14121:HG3_PB_pbsv_13802:HG3_Ill_MetaSV_1394:HG2_Ill_MetaSV_1270:HG3_PB_SVrefine2Falcon1Dovetail_8537:HG2_PB_SVrefine2Falcon1plusDovetail_3019:HG2_PB_SVrefine2PB10Xhap12_10194;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3019:HG3_PB_SVrefine2Falcon1Dovetail_8537;NumExactMatchSVs=2;ClusterMaxShiftDist=0.168919;ClusterMaxSizeDiff=0.168919;ClusterMaxEditDist=0.199324;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=305;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=13:62588959-62588972;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=0.9935;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:0|1:23:0:0:30:./.:1:7:28:0:0/1:23:11:0/1:10:22:.:.:.
chr13	63262191	HG2_PB_SVrefine2PB10Xhap12_10198	A	ATATAATTTGATATATAATTATATTATGCCTATAATAAATATTATAAATAATATATAAATAATATAATATATGATATAATATATAAATAATATAATATATAATATAATATATAAATAATATATAATATAATATAATATATAAATAATATAATATATAATATAATATAATACATAAATAATATAATATATAACATAATATATAAATAATATAATATAATATATAATATAATATATAAATAATATAATATATAATATAATATATAACATAATATAATATATAATATGCTATATATTAAAATATATAATATGTTATATATTATATTATAATTATGTTATATAATATGCTATATATTATAATATATAATATGCTATATATTATAATATATAATATATATTATATATAATGTATAATATAATATATTATATATTATATATAATG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6656:HG2_PB_SVrefine2PBcRplusDovetail_2854:HG2_PB_SVrefine2PB10Xhap12_10198:HG2_PB_SVrefine2Falcon1plusDovetail_3021:HG2_PB_SVrefine2PB10Xhap12_10197:HG2_PB_SVrefine2Falcon2Bionano_7029;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10198:HG2_PB_SVrefine2PBcRplusDovetail_2854;NumExactMatchSVs=2;ClusterMaxShiftDist=0.183066;ClusterMaxSizeDiff=0.183066;ClusterMaxEditDist=0.183066;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=438;DistBack=-679;DistForward=-1;DistMin=-679;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=598;REFWIDENED=13:63262192-63262789;PctSeqSimilarity=0.9491;PctSizeSimilarity=0.9977;PctRecOverlap=0.123;SizeDiff=-1;StartDistance=-385;EndDistance=-385;GTMatch=1;TruScore=68;MatchId=1460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:71:1/1:2:36:1:19:./.:0:3:0:1:1/1:0:16:1/1:1:35:.:.:.
chr13	64801976	HG3_Ill_scalpel_13594	T	TTCTTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTCTTTCTCTTTCTTTCTC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17789:HG3_Ill_GATKHCSBGrefine_9327:HG2_Ill_GATKHCSBGrefine_9418:HG4_Ill_scalpel_13025:HG2_PB_HySA_25763:HG2_PB_pbsv_14134:HG4_Ill_manta_3321:HG3_PB_pbsv_13812:HG4_Ill_Krunchall_19509:HG4_Ill_GATKHC_22538:HG4_Ill_GATKHCSBGrefine_9717:HG3_Ill_scalpel_13594:HG3_Ill_Spiral_14688:HG3_Ill_Krunchall_18836:HG3_Ill_GATKHC_22461:HG3_Ill_250bpfermikitraw_18335:HG3_Ill_150bpfermikitraw_17833:HG2_Ill_scalpel_13333:HG2_Ill_manta_3901:HG2_Ill_GATKHC_22577:HG2_Ill_250bpfermikitraw_18858:HG2_Ill_150bpfermikitraw_17790:HG2_PB_PB10Xdip_9021:HG2_PB_PB10Xdip_9020:HG3_Ill_scalpel_13593:HG3_Ill_Krunchall_18835:HG3_Ill_250bpfermikitraw_18334:HG3_Ill_150bpfermikitraw_17832:HG2_Ill_scalpel_13332:HG2_Ill_Krunchall_19199:HG2_Ill_250bpfermikitraw_18857;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17790:HG2_Ill_250bpfermikitraw_18858:HG2_Ill_GATKHC_22577:HG2_Ill_manta_3901:HG2_Ill_scalpel_13333:HG3_Ill_150bpfermikitraw_17833:HG3_Ill_250bpfermikitraw_18335:HG3_Ill_GATKHC_22461:HG3_Ill_Krunchall_18836:HG3_Ill_Spiral_14688:HG3_Ill_scalpel_13594:HG4_Ill_GATKHCSBGrefine_9717:HG4_Ill_GATKHC_22538:HG4_Ill_Krunchall_19509:HG4_Ill_manta_3321:HG4_Ill_scalpel_13025;NumExactMatchSVs=16;ClusterMaxShiftDist=0.308725;ClusterMaxSizeDiff=0.308725;ClusterMaxEditDist=0.310811;PBcalls=5;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=181;REFWIDENED=13:64801944-64802124;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1462.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:40:1/1:0:22:4:17:./.:4:13:1:14:./.:3:37:./.:.:.:.:.:.
chr13	64825865	HG2_Ill_SVrefine2DISCOVARplusDovetail_3364	T	TACATTCTGTAGGTTGTCTTTTCATTTCACGCATGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCATGTGTGCAGAAGCTTTTAGCTTGATATAATACAATTGACCTATTTTTGTTTTTCTACCTGTGCTTTTGAGGTCTTCCTCAAAAAAATTATTGTCCAAACAAATATTCTGAAGCAATTACTCAATGTTTTCTTCTAGTAGTTTCATAGTTCCAGGTTTTGTTTTTAAGTTTTTAATTTATTTAGAATTGTTTTTTGTATATGGTGGGAGACAAGGGTCTAGTTCCGTTCTTCTGCTTATGAACAACCAGTTATCCCAGCACTCTTTATTAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9022:HG3_PB_pbsv_13813:HG4_PB_pbsv_14100:HG2_PB_pbsv_14135:HG4_PB_SVrefine2PBcRDovetail_7056:HG4_Ill_SVrefine2DISCOVARDovetail_10012:HG4_Ill_MetaSV_1360:HG4_Ill_GATKHCSBGrefine_9718:HG2_PB_SVrefine2Falcon2Bionano_7033:HG2_10X_SVrefine210Xhap12_9830:HG4_PB_SVrefine2Falcon1Dovetail_8588:HG3_PB_SVrefine2PBcRDovetail_6659:HG2_PB_SVrefine2PBcRplusDovetail_2860:HG2_PB_SVrefine2PB10Xhap12_10206:HG2_PB_assemblyticsPBcR_6773:HG3_PB_SVrefine2Falcon1Dovetail_8543:HG3_Ill_SVrefine2DISCOVARDovetail_10139:HG3_Ill_MetaSV_1397:HG3_Ill_GATKHCSBGrefine_9328:HG2_PB_SVrefine2Falcon1plusDovetail_3024:HG2_Ill_SVrefine2DISCOVARplusDovetail_3364:HG2_Ill_MetaSV_1273:HG2_Ill_GATKHCSBGrefine_9419:HG2_PB_assemblyticsfalcon_7023:HG4_PB_HySA_20573:HG2_PB_PB10Xdip_9023;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9419:HG2_Ill_MetaSV_1273:HG2_Ill_SVrefine2DISCOVARplusDovetail_3364:HG2_PB_SVrefine2Falcon1plusDovetail_3024:HG3_Ill_GATKHCSBGrefine_9328:HG3_Ill_MetaSV_1397:HG3_Ill_SVrefine2DISCOVARDovetail_10139;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0643357;ClusterMaxSizeDiff=0.0587413;ClusterMaxEditDist=0.185286;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=347;DistBack=23835;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=13:64825866-64825866;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:62:1/1:1:35:1:35:1/1:0:27:0:27:1/1:0:20:1/1:2:75:.:.:.
chr13	64904744	HG3_Ill_svaba_17780	A	AAAGAATCAAATATATGAAAATGAAGACATGATATTAAAAGAATATGTATTAATTAATTTCCACCTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9833:HG2_PB_pbsv_14137:HG2_PB_HySA_25764:HG3_PB_pbsv_13815:HG2_PB_PB10Xdip_9026:HG2_PB_SVrefine2PBcRplusDovetail_2861:HG3_PB_HySA_21303:HG2_PB_SVrefine2PB10Xhap12_10208:HG3_Ill_svaba_17780:HG3_Ill_manta_3195:HG3_Ill_Krunchall_18840:HG3_Ill_GATKHC_22464:HG3_Ill_GATKHCSBGrefine_9330:HG3_Ill_250bpfermikitraw_18337:HG2_PB_assemblyticsfalcon_7025:HG2_Ill_svaba_17614:HG2_Ill_Krunchall_19203:HG2_Ill_GATKHC_22580:HG2_Ill_GATKHCSBGrefine_9421:HG2_Ill_250bpfermikitraw_18860;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9833:HG3_Ill_svaba_17780:HG3_Ill_manta_3195:HG3_Ill_Krunchall_18840:HG3_Ill_GATKHC_22464:HG3_Ill_GATKHCSBGrefine_9330:HG3_Ill_250bpfermikitraw_18337:HG2_PB_assemblyticsfalcon_7025:HG2_Ill_svaba_17614:HG2_Ill_Krunchall_19203:HG2_Ill_GATKHC_22580:HG2_Ill_GATKHCSBGrefine_9421:HG2_Ill_250bpfermikitraw_18860;NumExactMatchSVs=13;ClusterMaxShiftDist=0.191176;ClusterMaxSizeDiff=0.176471;ClusterMaxEditDist=0.307692;PBcalls=8;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=66;DistBack=1084;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=74;REFWIDENED=13:64904745-64904818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1464.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:29:./.:34:1:11:27:./.:2:30:18:0:0/1:21:22:./.:.:.:.:.:.
chr13	64964519	HG3_PB_SVrefine2Falcon1Dovetail_8546	T	TAAGAACTGTGGTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3026:HG2_PB_HySA_25766:HG2_PB_HySA_25765:HG3_PB_pbsv_13817:HG3_PB_SVrefine2Falcon1Dovetail_8546:HG2_PB_pbsv_14138:HG2_PB_assemblyticsfalcon_7027:HG3_PB_HySA_21307;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8546;NumExactMatchSVs=1;ClusterMaxShiftDist=0.207668;ClusterMaxSizeDiff=0.204473;ClusterMaxEditDist=0.258786;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=324;DistBack=1578;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:64964520-64964535;PctSeqSimilarity=0.994;PctSizeSimilarity=0.9939;PctRecOverlap=0.9786;SizeDiff=-2;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=98;MatchId=1465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:43:0|1:45:2:0:39:1|0:0:6:36:0:0/1:28:13:0/1:5:23:.:.:.
chr13	66014507	HG4_PB_SVrefine2PBcRDovetail_7060	T	TAAAGACTTAAATTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_25769:HG4_PB_pbsv_14104:HG2_PB_PB10Xdip_9034:HG4_PB_HySA_20578:HG3_PB_pbsv_13821:HG2_Ill_breakscan11_4490:HG2_PB_pbsv_14144:HG2_PB_SVrefine2Falcon2Bionano_7034:HG2_PB_SVrefine2PB10Xhap12_10212:HG4_PB_SVrefine2PBcRDovetail_7060:HG4_PB_SVrefine2Falcon1Dovetail_8592;NumClusterSVs=11;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_7060;NumExactMatchSVs=1;ClusterMaxShiftDist=0.100917;ClusterMaxSizeDiff=0.0978593;ClusterMaxEditDist=0.248876;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=336;DistBack=86982;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:66014508-66014522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1466.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:36:0|1:31:3:0:42:0|1:29:0:0:9:0/1:32:12:0/1:8:32:.:.:.
chr13	66720736	HG2_PB_SVrefine2PB10Xhap12_10215	A	ATTTCATGCACATCAGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAGCAATAAAGCTGTTTATTTCACCTGGGTGCAGGTGGGCCGAGTCTGAAAAGAGTCAGCAAAGGGAGATAGGGGTGGGGCCGTTTTATAGGATTTGGGAAGGTAATGGAAAATCACAGTCAAAGGGGGTTGTTCTCTGGTGGGCAGAGGTGGGGGTCACAAGGTGCTCAGTGGGGGAGTTTCTGAGCCAGGAGAAGGAAATTCGCAGGGTTAATCATTCAGTTAAGGTGGGGCAGGAACAAATCACAATGGTGGAATGTCATCAGTTAAGGCGGGGCAGGGCATATTCGCTTCTTTTGTGATTCTTCAGTTACTTCAGGCCATCTGGGCGTATACGTGCAAGTCACAGGGGATGCGATGGCTTGGCTTGGGCTCAGAGGCCTGACACTAGCCAAGTGCAGTGTTTTAGGTTTTTTAAAAAGTATTTTATTATTTGCATACCATCACAGTGACATTCTAATAGCTAAACAGCTCAGTTTTTTATATGACAGTTCCTCTCAAAACAGTGAATTTACATGGTTGATGTTGAAATTGATATACACACAAAAAAGATCTCTATCTTACTGACATATTGCATTCTATCTTTAAGAATTTTGTTTAAACTAAGGTATAAGGCAAAAAAAAGTTATAAAATCTAAATCTTAGCGTCTTACCTGATTTTTATTTAACATTCTTTCCTTGTGAAATGATGGCAGGGACGTGACTATGTTTAAACTTGAGCTACAGTACCTGAAATTCTTCAAATTGTGATAGAAGTCTTAAGATAGAAGAGAAGGATAATCATGTTGCCTTTCCTGTTTCCACAGAGTGCAGAACTCCTTCTATTATGAGTCTTAAAGGGAGTTGTAACAGCCTAATCGTTGTGCCTGAGTGTTAAATTGCATAACAACTAAAGGTAAGTTGAGCGATAATTGGCAAAATTGAAATGTAAATAATCAAAGATGTCACTCTAGGTAACCCTTCTTGGAAAACTCTCAAAAGACTGAAGTATATAGAAAAATGTCTTAAGTATGTCATTTCCTTTTCTTTACATTTTCTCTCTGATGTACTTTTTAGTGTCCTAGCAATAAGACTTCCCAAATGAGTTTGTGAGACCAAATAAAACTCTACACGGATGTTAGGAAGAAAGCAGGATATTAGCACTCTCTAATTCATATTCCCACCTGCTTCCTTGCTTGTTATC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8594:HG4_PB_pbsv_14108:HG2_PB_pbsv_14148:HG3_PB_pbsv_13824:HG2_PB_PB10Xdip_9045:HG2_PB_PB10Xdip_9044:HG4_Ill_MetaSV_1362:HG3_Ill_MetaSV_1400:HG2_Ill_MetaSV_1278:HG2_PB_assemblyticsfalcon_7040:HG2_PB_SVrefine2Falcon1plusDovetail_3032:HG4_PB_SVrefine2PBcRDovetail_7062:HG3_PB_SVrefine2PBcRDovetail_6663:HG3_PB_SVrefine2Falcon1Dovetail_8548:HG4_Ill_SVrefine2DISCOVARDovetail_10021:HG3_Ill_SVrefine2DISCOVARDovetail_10149:HG2_PB_SVrefine2PBcRplusDovetail_2866:HG2_PB_SVrefine2PB10Xhap12_10215:HG2_PB_SVrefine2Falcon2Bionano_7036:HG2_Ill_SVrefine2DISCOVARplusDovetail_3373:HG2_10X_SVrefine210Xhap12_9841;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9841:HG2_Ill_SVrefine2DISCOVARplusDovetail_3373:HG2_PB_SVrefine2Falcon2Bionano_7036:HG2_PB_SVrefine2PB10Xhap12_10215:HG2_PB_SVrefine2PBcRplusDovetail_2866:HG3_Ill_SVrefine2DISCOVARDovetail_10149:HG4_Ill_SVrefine2DISCOVARDovetail_10021;NumExactMatchSVs=7;ClusterMaxShiftDist=0.244124;ClusterMaxSizeDiff=0.242474;ClusterMaxEditDist=0.274639;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1228;DistBack=31761;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=432;REFWIDENED=13:66720737-66721168;PctSeqSimilarity=0.9951;PctSizeSimilarity=0.9984;PctRecOverlap=0.9131;SizeDiff=-2;StartDistance=-106;EndDistance=-106;GTMatch=0;TruScore=96;MatchId=1467.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:15:0:11:./.:0:5:0:5:1/1:0:20:0/1:17:96:.:955:.
chr13	67903454	HG2_Ill_GATKHCSBGrefine_9425	T	TTATCTATCTGTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4491:HG4_PB_pbsv_14111:HG2_PB_pbsv_14150:HG4_Ill_GATKHCSBGrefine_9721:HG2_PB_assemblyticsfalcon_7049:HG4_PB_SVrefine2PBcRDovetail_7064:HG2_PB_HySA_25782:HG2_Ill_GATKHCSBGrefine_9425:HG2_PB_SVrefine2Falcon2Bionano_7037:HG3_PB_SVrefine2Falcon1Dovetail_8549:HG4_PB_SVrefine2Falcon1Dovetail_8595:HG2_PB_SVrefine2Falcon1plusDovetail_3033;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9425:HG4_PB_SVrefine2PBcRDovetail_7064;NumExactMatchSVs=2;ClusterMaxShiftDist=0.246154;ClusterMaxSizeDiff=0.241758;ClusterMaxEditDist=0.28;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=240;DistBack=49;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=13:67903455-67903471;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1468.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:31:0|1:27:1:0:24:0|1:17:0:0:5:0/1:25:10:./.:.:.:.:.:.
chr13	67967151	HG2_Ill_GATKHCSBGrefine_9427	A	AACATTCAGGCTTTATTTTTTTTTTTTATTTTATTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGAGGACTGCAGTGGCGGAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6665:HG3_PB_HySA_21317:HG2_PB_assemblyticsfalcon_7051:HG2_PB_pbsv_14152:HG3_Ill_MetaSV_1401:HG3_PB_pbsv_13827:HG3_Ill_GATKHCSBGrefine_9337:HG2_PB_HySA_25784:HG2_Ill_MetaSV_1279:HG2_Ill_GATKHCSBGrefine_9427:HG2_10X_SVrefine210Xhap12_9845:HG2_PB_SVrefine2Falcon1plusDovetail_3035:HG4_PB_SVrefine2Falcon1Dovetail_8596:HG3_PB_SVrefine2Falcon1Dovetail_8550;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9845:HG2_Ill_GATKHCSBGrefine_9427:HG2_Ill_MetaSV_1279:HG3_Ill_GATKHCSBGrefine_9337:HG3_Ill_MetaSV_1401;NumExactMatchSVs=5;ClusterMaxShiftDist=0.207668;ClusterMaxSizeDiff=0.204473;ClusterMaxEditDist=0.250396;PBcalls=9;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=330;DistBack=16556;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:67967152-67967167;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:36:./.:18:12:6:21:1|0:0:7:22:0:0/1:31:16:0/1:7:44:.:.:.
chr13	68097909	HG2_PB_SVrefine2PB10Xhap12_10219	AAAATGTAA	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCAGGACTGGACTGCAGTGGCAATCTCGGCTCACTGCAAGCTCCGCTCCCGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTACTACAGGCGCCGCCACCGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGTTTCACCTTGTTAGCCAGGATGGTCGATCTCCTGACCTCATGATCCACCCCTCGCCTCCAAGTGCTGGATTACAGGCGTGAGCCACCGCCCCCTCATTTTTAAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3036:HG2_PB_SVrefine2PB10Xhap12_10219:HG3_PB_pbsv_13828:HG2_PB_pbsv_14153:HG2_PB_assemblyticsfalcon_7053:HG2_PB_assemblyticsPBcR_6792:HG2_PB_SVrefine2PBcRplusDovetail_2868:HG2_PB_HySA_25785:HG3_PB_SVrefine2Falcon1Dovetail_8551;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10219;NumExactMatchSVs=1;ClusterMaxShiftDist=0.238173;ClusterMaxSizeDiff=0.238173;ClusterMaxEditDist=0.266886;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=284;DistBack=1;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:68097918-68097908;PctSeqSimilarity=0.9259;PctSizeSimilarity=0.8529;PctRecOverlap=0.8799;SizeDiff=-49;StartDistance=13;EndDistance=21;GTMatch=0;TruScore=88;MatchId=1470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:21:23:./.:16:11:5:8:./.:2:3:25:0:0/0:27:2:./.:.:.:.:.:.
chr13	68114178	HG2_PB_pbsv_14154	T	TCTAATATCTTGCGGCCGGACGGCGGTGGCTCACGCCTGTAAATCCCAGCACTTTGGGAGGCCCGAGGCAGGGCGGGGCGGATCACGAGGCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCTGGGCATGGTGGCGGGCAGCTGTAGTCCCGCAGCTACTTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGTAAAGCGGAGCTTGCAGTGAGCCGAGATCCCGCCCTGCGACTCCACCTGGCGCCAGAGCGAAGACCCGGTATCAAAAAAAAAAAAAAAAATAGATAATAATATAATATATATATTTATATATATTATAGTATATACTATA	20	PASS	ClusterIDs=HG3_PB_HySA_21318:HG2_PB_pbsv_14154:HG2_Ill_breakscan11_4492:HG3_PB_pbsv_13829:HG2_PB_PB10Xdip_9049:HG2_PB_SVrefine2PB10Xhap12_10220:HG3_Ill_SVrefine2DISCOVARDovetail_10155;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_14154;NumExactMatchSVs=1;ClusterMaxShiftDist=0.158046;ClusterMaxSizeDiff=0.155172;ClusterMaxEditDist=0.213904;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=372;DistBack=-9;DistForward=67723;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=13:68114179-68114178;PctSeqSimilarity=0.9413;PctSizeSimilarity=0.9516;PctRecOverlap=0.9517;SizeDiff=18;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=94;MatchId=1471.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:20:0|1:35:3:2:18:1|0:0:6:24:0:0/1:29:6:0/1:10:5:.:.:.
chr13	68354763	HG3_Ill_GATKHCSBGrefine_9340	A	ATATATATAATATATATAATATATATTATATATAATATATATAATATATATAATATGTATTATATATATTGCTATATATAATATATATAATATATAAATTGCTATATATAATATATATAATT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9846:HG2_PB_HySA_25793:HG3_PB_HySA_21324:HG4_Ill_manta_3325:HG3_Ill_Spiral_14711:HG3_Ill_GATKHCSBGrefine_9340:HG2_Ill_GATKHCSBGrefine_9431:HG4_Ill_MetaSV_1364:HG4_PB_HySA_20593:HG3_Ill_MetaSV_1402:HG2_Ill_MetaSV_1280:HG3_PB_pbsv_13833:HG2_PB_pbsv_14159;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9431:HG3_Ill_GATKHCSBGrefine_9340:HG3_Ill_Spiral_14711;NumExactMatchSVs=3;ClusterMaxShiftDist=0.280443;ClusterMaxSizeDiff=0.265683;ClusterMaxEditDist=0.354244;PBcalls=5;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=121;DistBack=15;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=13:68354744-68354781;PctSeqSimilarity=0.9;PctSizeSimilarity=0.8121;PctRecOverlap=0.8121;SizeDiff=-28;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=84;MatchId=1472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:24:0|1:37:3:1:28:./.:2:5:18:1:0/1:35:16:./.:.:.:.:.:.
chr13	68823790	HG2_Ill_SpiralSDKrefine_4398	A	AAGTGGAAGGATCAAAGCTCATTGCTGCCTCCAACTCCTAGGGTCAAGCTATCCTTGCCTCAGACTCCTAAGTAGCTGGTACTACAAGCACATACCACCATACCCAGCT	20	PASS	ClusterIDs=HG2_PB_pbsv_14161:HG4_PB_assemblyticsfalcon_6950:HG2_Ill_breakscan11_4493:HG4_PB_SVrefine2Falcon1Dovetail_8600:HG4_Ill_svaba_17664:HG4_Ill_manta_3327:HG4_Ill_SVrefine2DISCOVARDovetail_10028:HG4_Ill_MetaSV_1366:HG4_Ill_GATKHCSBGrefine_9728:HG4_Ill_Cortex_942:HG2_PB_SVrefine2Falcon2Bionano_7042:HG2_Ill_svaba_17634:HG2_Ill_manta_3908:HG2_Ill_SpiralSDKrefine_4398:HG2_Ill_SVrefine2DISCOVARplusDovetail_3378:HG2_Ill_MetaSV_1282:HG2_Ill_GATKHCSBGrefine_9434:HG2_Ill_Cortex_2252:HG2_10X_SVrefine210Xhap12_9848:HG2_PB_HySA_25796:HG4_PB_HySA_20594:HG4_PB_pbsv_14120;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9848:HG2_Ill_Cortex_2252:HG2_Ill_GATKHCSBGrefine_9434:HG2_Ill_MetaSV_1282:HG2_Ill_SVrefine2DISCOVARplusDovetail_3378:HG2_Ill_SpiralSDKrefine_4398:HG2_Ill_manta_3908:HG2_Ill_svaba_17634:HG2_PB_SVrefine2Falcon2Bionano_7042:HG4_Ill_Cortex_942:HG4_Ill_GATKHCSBGrefine_9728:HG4_Ill_MetaSV_1366:HG4_Ill_SVrefine2DISCOVARDovetail_10028:HG4_Ill_manta_3327:HG4_Ill_svaba_17664:HG4_PB_SVrefine2Falcon1Dovetail_8600;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0723982;ClusterMaxSizeDiff=0.0720721;ClusterMaxEditDist=0.174672;PBcalls=7;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=108;DistBack=15958;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=13:68823791-68823792;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:41:0|1:30:0:1:34:0|1:21:0:0:29:0/1:37:30:./.:.:.:.:.:.
chr13	69670751	HG2_PB_SVrefine2Falcon1plusDovetail_3045	T	TCATTCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCA	10	PASS	ClusterIDs=HG3_PB_pbsv_13838:HG3_PB_assemblyticsfalcon_7057:HG2_PB_pbsv_14163:HG3_PB_HySA_21332:HG2_PB_HySA_25804:HG2_PB_SVrefine2PBcRplusDovetail_2874:HG2_PB_assemblyticsPBcR_6806:HG2_PB_SVrefine2PB10Xhap12_10227:HG2_PB_SVrefine2Falcon2Bionano_7044:HG2_PB_SVrefine2Falcon1plusDovetail_3045:HG2_PB_PB10Xdip_9081:HG2_PB_PB10Xdip_9082;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3045:HG2_PB_SVrefine2Falcon2Bionano_7044;NumExactMatchSVs=2;ClusterMaxShiftDist=0.286765;ClusterMaxSizeDiff=0.279412;ClusterMaxEditDist=0.338235;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=151;DistBack=10175;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=13:69670752-69670764;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1474.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:30:0|1:26:2:2:28:1|0:1:12:39:0:./.:30:3:./.:.:.:.:.:.
chr13	70056949	HG4_Ill_MetaSV_1371	G	GGAGAAGTTTATTTATTTATTTATTTATTTATTTATTTATTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGCGGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAAGCTCCGCCTCCAGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCATCACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4494:HG2_PB_pbsv_14166:HG4_PB_assemblyticsfalcon_6964:HG4_PB_pbsv_14124:HG3_PB_assemblyticsfalcon_7064:HG2_PB_assemblyticsPBcR_6813:HG3_PB_SVrefine2Falcon1Dovetail_8557:HG4_Ill_SVrefine2DISCOVARDovetail_10033:HG4_Ill_MetaSV_1371:HG2_PB_SVrefine2Falcon2Bionano_7047:HG2_PB_SVrefine2Falcon1plusDovetail_3048:HG2_Ill_SVrefine2DISCOVARplusDovetail_3381:HG2_Ill_MetaSV_1287:HG2_Ill_GATKHCSBGrefine_9439:HG4_Ill_GATKHCSBGrefine_9734:HG4_PB_SVrefine2Falcon1Dovetail_8603:HG2_PB_HySA_25810:HG2_PB_SVrefine2PBcRplusDovetail_2877;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9439:HG2_Ill_MetaSV_1287:HG2_Ill_SVrefine2DISCOVARplusDovetail_3381:HG2_PB_SVrefine2Falcon1plusDovetail_3048:HG2_PB_SVrefine2Falcon2Bionano_7047:HG4_Ill_MetaSV_1371:HG4_Ill_SVrefine2DISCOVARDovetail_10033;NumExactMatchSVs=7;ClusterMaxShiftDist=0.165869;ClusterMaxSizeDiff=0.165869;ClusterMaxEditDist=0.197767;PBcalls=11;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=327;DistBack=20233;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=13:70056950-70056961;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:28:0|1:36:1:0:25:0|1:27:0:0:13:0/1:25:20:0/1:9:38:.:.:.
chr13	70295194	HG2_PB_PB10Xdip_9084	G	ATATATATATATATATATATATATATATATATATATATATATATATATATATACAAATTCCTTGTAAGGGAGGTACATAGCTTTATATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9084:HG2_PB_pbsv_14169:HG2_PB_HySA_25813:HG2_PB_SVrefine2Falcon1plusDovetail_3049:HG3_PB_assemblyticsfalcon_7067:HG3_PB_SVrefine2Falcon1Dovetail_8558:HG4_PB_SVrefine2Falcon1Dovetail_8604:HG4_PB_assemblyticsfalcon_6967:HG4_PB_pbsv_14127:HG4_Ill_GATKHCSBGrefine_9737:HG3_PB_SVrefine2PBcRDovetail_6670:HG3_Ill_SVrefine2DISCOVARDovetail_10164:HG3_Ill_GATKHCSBGrefine_9347:HG2_PB_SVrefine2PBcRplusDovetail_2879:HG2_PB_SVrefine2Falcon2Bionano_7048:HG4_PB_SVrefine2PBcRDovetail_7070:HG3_PB_pbsv_13841:HG2_Ill_GATKHCSBGrefine_9441:HG2_PB_SVrefine2PB10Xhap12_10231:HG4_PB_HySA_20608:HG2_PB_PB10Xdip_9085;NumClusterSVs=21;ExactMatchIDs=HG2_PB_PB10Xdip_9084:HG2_PB_PB10Xdip_9085;NumExactMatchSVs=2;ClusterMaxShiftDist=0.288136;ClusterMaxSizeDiff=0.288136;ClusterMaxEditDist=0.387665;PBcalls=17;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=123;DistBack=36032;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:70295195-70295193;PctSeqSimilarity=0.9841;PctSizeSimilarity=0.9685;PctRecOverlap=0.9685;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1476.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:1/1:2:21:1:14:./.:0:0:0:0:0/1:2:8:./.:.:.:.:.:.
chr13	70945573	HG2_10X_SVrefine210Xhap12_9855	C	CCATCATTTTTGGGGTAAAAAATTAATTTTAGGGAAAACATTTGTTCACTGAATTATACAGATTATACAAGAGCTTGACACATTTTATTATAAAATATATATTTAAGGATCATAACTGTTAATATCACCATCAGTCTCATCAGGGAAGTTTTTATGTATTGATAAACCACAATGGTGAGTATAAATAAGCTTTCCAAAGTTCTACTAATGGAGAAAGACAGGAAAGTAATACTTTCTGAACATACAGATTAACTACAAAGATTTTGAAAGAAAATGCTCATCACTGACAACAAATGCTGTCATTTATTTTCTCTCTTGAAGGGTTCACTTCATTCCTTTTTGAAGAGCTGTATCAATTCCCACGTCCAAATAATCATAGCTGTCAAATGCTTTTTCAAGTAAAAATAGTGTTTCATGGAAAAAAAAAAGTTGGTTCAGATTGCAACTCAAATAATTGCACACATATTTTCCTTGAGAAAACCACAGTACTAGCATGTATGTTGTAGAATTGCATTATACATACTTATAATTGTGGCATATGGAATATTAAAATGATAGCAGTTTAATGAAGTTAGTGATTTTTACTCCTGCTTTATCAAGAACAGTGTTATGTGAGAGGTTTTTGTTTGTTTTTTACCTTAGACATACAGAGGTGAGTAACATAATAATTGTGAATGTGATTTGGTGCCACATTTTTGATTCATGCTAAGGTAACATTTTTTTACCCATTGCTTTTGTACTGTGAATAAAAATGCTAACACAATGAAACAAGGAAATAACTTCTTGGTAGTTTTCTTTTTTTCCCAATAAGACTTGCAGACACCTGAAAAATTCTCAGGGATCTCTAGAGGTTGGTGGACCATACTTCAAAAACGGATGGCTGAAGATATATATTTATCGAACCCAAGGCTAAAAGTCATGGTTTCTAATACCTAGCCTAGAGCTTGCTTCAACCCTGTAAACCTCCTCATATACTTTGATTTCTATTACTACTTAACCTTTTCCAGACACCCTTCTTGTCTACCCGTTTACTCATCACTTCTGCAATGCTCTATGGTATATATGGTATTTTTGTGAACACAGTTTCTTGGATTGCACATATTTTCTATTAATCCTCACCTTCATTTTCCTTTACCTTTTGCAGTAGATTCAATACCTCTTATCACCCTCAACTGTTCTCAAGCTAAGGACCATGAAACTGTTAGTATCCCCATTTCTGGTTATTTCTTGGTATTCAGATTTTGACAGAATATATCTATATGAGATATATATTACCACATTTAGCTTGGTAGATAGTAAAAAGAAATAAGCAGCAAATCAATTAAATGTTTTATGACAGCAAAATAAGCTGCCTGCTATGGAGGTAAACATGAGAAGCTTTTCATTCAGAACAATAGTAGAGGTCATGAGTGACACATAAGGGCTGAAAAAATGCTTCATTATGTAGAGGTTTCCTCTCTGCTGGAAGGGATTATAGTACTAACAATGTGCAAGAATCTGCTTATATTGCAAGGAAAACACTATTTTTTTTTTTTGTCACCAGTGTCTGCATTTCTTGAGATAATGTTTTTTGTGTCAGATATGTTAGTGAGCCACCAAGAGCCAATTGTTCTCTCTTTAAGGCTAATAAAATTTCCACTTTTTTCTTTTGAGACAGAGTTGTACTCTGTTGCCCAGGCTGGAGTGCAGTGGCACAATCTCATCTCACTGCAACCTCTGCCTCCCAGGCTCAAGTGATTCTCCTGCCTCAGCCTCCTGAATAGCTGGGACTACAGGCACCCGCCACCACACCTGGCTAATTTTTTGTCTTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCTGCTTCAGCCTCCCAAAGTGCTGGGGTTACAGGCGTGGGCCACCACGCACAGCAAAAATTTCCACTTTTTAAGGGACATCAATGTTTATCTGCAGGAAATAAATTATGGTGAATTAAAGCCAATTATGCTCATAGCATTCTCCATATCCAGATATTTAACAGACTTTCTTGCTCTTATCCAATGAGACAAAAGGATGTTTTCTCTTTTGGTGGAGCTTCTGGGAAGAAAAAATAAAAAAGCTTGAACAAAGACACAGTGGCCCAATAAGTACTTGCTTGAATTGTTCATCACTTTCCTTTCAGCCTTGAATGAAAACTCAGAGCCTGTTGAATCCAGTCATCCTGCTGTCGTTGGATGGCATGGCAACACTTTCAGAATAGCCAAGCAGGAGGAAAAAATGCTTTTGGACCTTGATGCATTCTTGAGGATGTTATTGTTTCACCACTGGTATTAATTTCATTTTTTAAATTAAGCTAGATAAAAGGAATATTGTTTAAATCTCTCATTTTAATTTCATTATTGTTGGGGATGGATAGTCACAGCCCAAAGCATTTACAATCTTTTGATATGGTTCTCTAGAATTGAAATCTTCTCCTCTCCTAAATTTTACCACTTACATAGCCTCCAGTTGATGGGTATGTGGCTTGGTTTTACATGACAGTTTCTTGCATTGGCCTTTTGATACTCACTGCTCTTTTATTTTAAATATTTAATCTCATTTTTCCCCTGTAATTGGTCTCTGACCACATTGAATCTCTTGGTGATATGGTTGATTTTACAAGTCTTTTATGTGTTTTCTTACCTCTCCTCCTACTGAATATGTAACCTAAAAATCTTAGTTTCTCACTTTTGGGAACTTCCTATTAAAAATTCTTGATCTCTGTCTTTGTACCTTTCCTCTCAGAAATTTGTCTGTTCCTAGGGTAAGGGAAAAGTAAGAACTCCCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4495:HG3_PB_pbsv_13843:HG3_Ill_Spiral_14727:HG4_PB_pbsv_14129:HG2_PB_pbsv_14171:HG3_PB_SVrefine2Falcon1Dovetail_8560:HG3_Ill_SVrefine2DISCOVARDovetail_10167:HG3_PB_SVrefine2PBcRDovetail_6672:HG4_PB_SVrefine2Falcon1Dovetail_8606:HG4_Ill_SVrefine2DISCOVARDovetail_10039:HG2_PB_SVrefine2PB10Xhap12_10233:HG2_PB_SVrefine2PBcRplusDovetail_2881:HG2_PB_SVrefine2Falcon1plusDovetail_3051:HG2_10X_SVrefine210Xhap12_9855:HG2_PB_PB10Xdip_9086;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9855:HG2_PB_SVrefine2Falcon1plusDovetail_3051:HG2_PB_SVrefine2PBcRplusDovetail_2881;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0471159;ClusterMaxSizeDiff=0.0471077;ClusterMaxEditDist=0.150956;PBcalls=10;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=2824;DistBack=17566;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=13:70945574-70945578;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:67:./.:19:26:11:32:1|0:0:12:27:0:0/1:20:20:0/1:99:138:.:3330:.
chr13	71137269	HG2_PB_SVrefine2PBcRplusDovetail_2882	T	TAGTTTCAAGCAATGTTAGTAATAAATCACTCCTTTTCCAGAAAAATCTTTTGTTTTTCTAAATTGTTAATAATTGTCTGGTCTGTATTACCCAGAGATTGCCTGGCATTAGGTTTTGTTAGATGTTCCTTACCTCAAATGTGAAAGGTGGGGAAAACATTTAATCTTCAAAGATGAGGATTTTTTATATGAAAGTACATGTAAAAAGAATTAATCAGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8607:HG4_PB_HySA_20612:HG2_PB_pbsv_14172:HG3_PB_pbsv_13844:HG2_PB_HySA_25819:HG2_PB_PB10Xdip_9088:HG2_PB_PB10Xdip_9087:HG4_PB_pbsv_14130:HG4_Ill_SVrefine2DISCOVARDovetail_10040:HG2_PB_SVrefine2PBcRplusDovetail_2882:HG2_PB_SVrefine2PB10Xhap12_10234:HG2_PB_SVrefine2Falcon2Bionano_7050:HG2_Ill_SVrefine2DISCOVARplusDovetail_3387:HG2_PB_SVrefine2Falcon1plusDovetail_3052:HG3_PB_SVrefine2Falcon1Dovetail_8561;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3387:HG2_PB_SVrefine2Falcon2Bionano_7050:HG2_PB_SVrefine2PB10Xhap12_10234:HG2_PB_SVrefine2PBcRplusDovetail_2882:HG4_Ill_SVrefine2DISCOVARDovetail_10040;NumExactMatchSVs=5;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.222222;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=218;DistBack=62753;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=437;REFWIDENED=13:71137270-71137706;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9954;PctRecOverlap=0.7443;SizeDiff=-1;StartDistance=-56;EndDistance=-56;GTMatch=0;TruScore=91;MatchId=1478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:42:1/1:1:15:1:20:./.:1:3:1:2:0/1:12:9:./.:.:.:.:.:.
chr13	71142393	HG2_PB_SVrefine2Falcon2Bionano_7051	T	TCCAAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCG	20	PASS	ClusterIDs=HG2_PB_pbsv_14173:HG3_PB_pbsv_13845:HG2_PB_HySA_25820:HG2_Ill_MetaSV_1288:HG3_Ill_MetaSV_1407:HG3_Ill_GATKHCSBGrefine_9351:HG2_PB_SVrefine2Falcon2Bionano_7051:HG2_Ill_SVrefine2DISCOVARplusDovetail_3388:HG2_Ill_GATKHCSBGrefine_9445:HG2_Ill_breakscan11_4496;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9445:HG2_Ill_SVrefine2DISCOVARplusDovetail_3388:HG2_PB_SVrefine2Falcon2Bionano_7051:HG3_Ill_GATKHCSBGrefine_9351:HG3_Ill_MetaSV_1407;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0616246;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.142857;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=174;DistBack=4687;DistForward=50446;DistMin=4687;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=13:71142394-71142404;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:./.:20:8:8:18:1|0:1:13:24:0:0/1:21:4:./.:.:.:.:.:.
chr13	73227391	HG3_Ill_manta_3207	A	ATTACAAGTCTCTATTATAAGAACATGTCTATTATCAAGAGAAGGAAAAAAGATTTACCTGCAAATGAAGCAGACTTTGGGGATTAAAACAATGCAAACTCATGTCACTTCATGGACTCATTACCATCCACACCGTGTCTGTATTCTCCAGTAGTGTATTTTGTTAACAAGATACAAGTGAAATGGGTGTGTATGCAGAAATGTCCCACTAGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9095:HG2_Ill_Spiral_945:HG4_PB_pbsv_14139:HG3_PB_assemblyticsfalcon_7089:HG3_PB_pbsv_13855:HG3_PB_SVrefine2Falcon1Dovetail_8567:HG2_PB_pbsv_14183:HG4_PB_assemblyticsfalcon_6989:HG2_PB_assemblyticsPBcR_6842:HG2_Ill_breakscan11_4497:HG4_PB_SVrefine2PBcRDovetail_7079:HG4_PB_SVrefine2Falcon1Dovetail_8614:HG4_Ill_MetaSV_1375:HG4_Ill_GATKHCSBGrefine_9749:HG3_PB_SVrefine2PBcRDovetail_6679:HG3_Ill_manta_3207:HG3_Ill_SVrefine2DISCOVARDovetail_10180:HG3_Ill_MetaSV_1412:HG3_Ill_GATKHCSBGrefine_9362:HG2_PB_SVrefine2PBcRplusDovetail_2889:HG2_PB_SVrefine2PB10Xhap12_10242:HG2_PB_SVrefine2Falcon2Bionano_7058:HG2_PB_SVrefine2Falcon1plusDovetail_3059:HG2_Ill_MetaSV_1293:HG2_Ill_GATKHCSBGrefine_9454:HG2_10X_SVrefine210Xhap12_9865:HG2_PB_PB10Xdip_9096;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9865:HG2_Ill_GATKHCSBGrefine_9454:HG2_Ill_MetaSV_1293:HG2_PB_SVrefine2Falcon1plusDovetail_3059:HG2_PB_SVrefine2Falcon2Bionano_7058:HG2_PB_SVrefine2PB10Xhap12_10242:HG2_PB_SVrefine2PBcRplusDovetail_2889:HG3_Ill_GATKHCSBGrefine_9362:HG3_Ill_MetaSV_1412:HG3_Ill_SVrefine2DISCOVARDovetail_10180:HG3_Ill_manta_3207:HG3_PB_SVrefine2PBcRDovetail_6679:HG4_Ill_GATKHCSBGrefine_9749:HG4_Ill_MetaSV_1375:HG4_PB_SVrefine2Falcon1Dovetail_8614:HG4_PB_SVrefine2PBcRDovetail_7079;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0772727;ClusterMaxSizeDiff=0.0683371;ClusterMaxEditDist=0.14966;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=213;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=13:73227392-73227393;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1480.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:2:31:1:33:1/1:0:27:0:22:1/1:0:22:./.:.:.:.:.:.
chr13	73760906	HG2_Ill_SVrefine2DISCOVARplusDovetail_3402	A	ATATATATATGTGTATATATATGTGTGTGTATATATATGTGTGTATATACACACGTGTATATACACACGTGTATATACACACGTGTATATATGTGTGTATATACACACGTGTATATATGTGTATATATGTGTATATATGTATATATGTGTATATATGTATATATACATGTGTACATATACATGTGTACATATACGTGTGTATACATGTGTACATATACGTGTGTATACATGTGTACATATAAGTGTGTATACATGTGTATATATACGTGTGTATACATGTGTGTATATATACGTGTGTATACATGTGTACATATACGTGTGTATACAGTGTATATATACGTGTGTATACATGTGTATATATACGTGTGTATACATGTGTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3402:HG4_PB_HySA_20638:HG2_Ill_SVrefine2DISCOVARplusDovetail_3403:HG2_PB_pbsv_14188:HG3_PB_pbsv_13859:HG2_PB_SVrefine2Falcon1plusDovetail_3061:HG2_PB_SVrefine2Falcon2Bionano_7061:HG2_PB_HySA_25845;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3402:HG2_PB_SVrefine2Falcon2Bionano_7061;NumExactMatchSVs=2;ClusterMaxShiftDist=0.239554;ClusterMaxSizeDiff=0.239554;ClusterMaxEditDist=0.287308;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=379;DistBack=1809;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=168;REFWIDENED=13:73760907-73761074;PctSeqSimilarity=0.9663;PctSizeSimilarity=0.9743;PctRecOverlap=0.7198;SizeDiff=-10;StartDistance=-104;EndDistance=-104;GTMatch=0;TruScore=88;MatchId=1481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:36:0|1:30:1:2:40:./.:0:22:10:3:0/1:29:12:1/1:3:68:.:.:.
chr13	73848816	HG3_Ill_Krunchall_18919	G	GAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGC	20	PASS	ClusterIDs=HG2_PB_HySA_25851:HG3_Ill_svaba_17846:HG3_Ill_scalpel_13645:HG3_Ill_Krunchall_18919:HG3_Ill_GATKHC_22546:HG2_Ill_svaba_17683:HG2_Ill_GATKHC_22662;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_22662:HG2_Ill_svaba_17683:HG3_Ill_GATKHC_22546:HG3_Ill_Krunchall_18919:HG3_Ill_scalpel_13645:HG3_Ill_svaba_17846;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0144928;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0289855;PBcalls=1;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=-1;DistForward=30;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=75;REFWIDENED=13:73848797-73848871;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1482.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:22:./.:25:10:7:16:./.:2:12:21:0:0/1:22:11:./.:.:.:.:.:.
chr13	76214299	HG2_Ill_manta_3921	C	CTAGCTGCTGCAGCTAAAATCATTTTAAAGGGTTGCATGTGAAGGAATTGTACTGTGAGTCTTCCAATGATTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9874:HG2_PB_pbsv_14197:HG2_PB_PB10Xdip_9112:HG3_PB_assemblyticsfalcon_7111:HG2_PB_assemblyticsPBcR_6867:HG2_PB_PB10Xdip_9111:HG4_PB_pbsv_14153:HG4_Ill_svaba_17728:HG3_PB_pbsv_13870:HG4_Ill_manta_3339:HG4_Ill_SVrefine2DISCOVARDovetail_10059:HG4_Ill_Krunchall_19612:HG4_Ill_GATKHC_22642:HG4_Ill_GATKHCSBGrefine_9763:HG4_Ill_250bpfermikitraw_18698:HG3_Ill_svaba_17859:HG3_Ill_scalpel_13664:HG3_Ill_manta_3210:HG3_Ill_Spiral_14761:HG3_Ill_Krunchall_18937:HG3_Ill_GATKHC_22568:HG3_Ill_GATKHCSBGrefine_9367:HG3_Ill_250bpfermikitraw_18419:HG3_Ill_150bpfermikitraw_17920:HG2_PB_SVrefine2Falcon2Bionano_7068:HG2_Ill_svaba_17695:HG2_Ill_scalpel_13397:HG2_Ill_manta_3921:HG2_Ill_SpiralSDKrefine_4446:HG2_Ill_Krunchall_19297:HG2_Ill_GATKHC_22677:HG2_Ill_GATKHCSBGrefine_9464:HG2_Ill_250bpfermikitraw_18949;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9874:HG4_Ill_svaba_17728:HG4_Ill_manta_3339:HG4_Ill_SVrefine2DISCOVARDovetail_10059:HG4_Ill_Krunchall_19612:HG4_Ill_GATKHC_22642:HG4_Ill_GATKHCSBGrefine_9763:HG4_Ill_250bpfermikitraw_18698:HG3_Ill_svaba_17859:HG3_Ill_scalpel_13664:HG3_Ill_manta_3210:HG3_Ill_Spiral_14761:HG3_Ill_Krunchall_18937:HG3_Ill_GATKHC_22568:HG3_Ill_GATKHCSBGrefine_9367:HG3_Ill_250bpfermikitraw_18419:HG3_Ill_150bpfermikitraw_17920:HG2_PB_SVrefine2Falcon2Bionano_7068:HG2_Ill_svaba_17695:HG2_Ill_scalpel_13397:HG2_Ill_manta_3921:HG2_Ill_SpiralSDKrefine_4446:HG2_Ill_Krunchall_19297:HG2_Ill_GATKHC_22677:HG2_Ill_GATKHCSBGrefine_9464:HG2_Ill_250bpfermikitraw_18949;NumExactMatchSVs=26;ClusterMaxShiftDist=0.244604;ClusterMaxSizeDiff=0.244604;ClusterMaxEditDist=0.323529;PBcalls=8;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=72;DistBack=13567;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:76214300-76214314;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:1/1:0:31:1:33:1/1:1:50:1:48:1/1:0:55:./.:.:.:.:.:.
chr13	76350286	HG2_Ill_GATKHC_22680	G	GTATATATATCGGATATATATATATATATATATATATCGGATATATATATATATA	20	PASS	ClusterIDs=HG2_Ill_manta_3922:HG4_PB_pbsv_14155:HG4_Ill_GATKHC_22648:HG2_PB_HySA_25871:HG4_PB_HySA_20661:HG2_PB_pbsv_14198:HG4_Ill_150bpfermikitraw_18012:HG2_Ill_GATKHC_22680:HG4_Ill_manta_3340;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHC_22680:HG4_Ill_150bpfermikitraw_18012:HG4_Ill_GATKHC_22648;NumExactMatchSVs=3;ClusterMaxShiftDist=0.230769;ClusterMaxSizeDiff=0.230769;ClusterMaxEditDist=0.271845;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=4565;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=110;REFWIDENED=13:76350232-76350341;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:29:./.:0:2:2:0:./.:1:3:0:14:0/1:4:20:./.:.:.:.:.:.
chr13	77890838	HG2_Ill_150bpfermikitraw_17884	T	TACTAGCCATTCTAGATTCCTTTAATCTATGGCTAGTATTTCTGTTGGTCCAGGTGGCTG	20	PASS	ClusterIDs=HG4_PB_HySA_20676:HG2_PB_PB10Xdip_9120:HG2_PB_pbsv_14205:HG2_PB_HySA_25883:HG4_Ill_svaba_17745:HG4_Ill_Krunchall_19630:HG4_Ill_GATKHC_22664:HG4_Ill_GATKHCSBGrefine_9771:HG4_Ill_250bpfermikitraw_18715:HG2_PB_SVrefine2PBcRplusDovetail_2899:HG2_PB_SVrefine2PB10Xhap12_10258:HG2_PB_SVrefine2Falcon1plusDovetail_3070:HG2_Ill_svaba_17706:HG2_Ill_Krunchall_19313:HG2_Ill_GATKHC_22692:HG2_Ill_GATKHCSBGrefine_9468:HG2_Ill_250bpfermikitraw_18967:HG2_Ill_150bpfermikitraw_17884:HG2_PB_HySA_25882;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17884:HG2_Ill_250bpfermikitraw_18967:HG2_Ill_GATKHCSBGrefine_9468:HG2_Ill_GATKHC_22692:HG2_Ill_Krunchall_19313:HG2_Ill_svaba_17706:HG2_PB_SVrefine2Falcon1plusDovetail_3070:HG2_PB_SVrefine2PB10Xhap12_10258:HG2_PB_SVrefine2PBcRplusDovetail_2899:HG4_Ill_250bpfermikitraw_18715:HG4_Ill_GATKHCSBGrefine_9771:HG4_Ill_GATKHC_22664:HG4_Ill_Krunchall_19630:HG4_Ill_svaba_17745;NumExactMatchSVs=14;ClusterMaxShiftDist=0.112903;ClusterMaxSizeDiff=0.0967742;ClusterMaxEditDist=0.171875;PBcalls=8;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=59;DistBack=-59;DistForward=54;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=62;REFWIDENED=13:77890839-77890900;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1485.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:47:./.:35:15:4:16:0|1:5:0:1:16:0/1:22:31:./.:.:.:.:.:.
chr13	78584663	HG2_PB_SVrefine2Falcon1plusDovetail_3072	G	GCAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_25890:HG3_PB_HySA_21403:HG2_PB_pbsv_14210:HG3_PB_pbsv_13881:HG2_PB_assemblyticsPBcR_6889:HG2_PB_PB10Xdip_9132:HG2_PB_PB10Xdip_9131:HG3_PB_HySA_21402:HG4_PB_SVrefine2Falcon1Dovetail_8626:HG3_PB_SVrefine2PBcRDovetail_6690:HG3_PB_SVrefine2Falcon1Dovetail_8583:HG4_Ill_MetaSV_1380:HG2_PB_SVrefine2Falcon1plusDovetail_3072:HG2_PB_SVrefine2PB10Xhap12_10262:HG2_PB_SVrefine2PBcRplusDovetail_2902:HG4_PB_pbsv_14169:HG2_Ill_breakscan11_4499;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3072;NumExactMatchSVs=1;ClusterMaxShiftDist=0.154093;ClusterMaxSizeDiff=0.154093;ClusterMaxEditDist=0.189406;PBcalls=15;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=6557;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=13:78584664-78584671;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9937;PctRecOverlap=0.9937;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1486.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:57:0|1:25:0:0:52:./.:0:4:33:0:0/1:22:12:0/1:10:24:.:.:.
chr13	78651671	HG2_Ill_GATKHCSBGrefine_9470	T	TAAAAATGGGAATTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1300:HG3_PB_pbsv_13882:HG4_PB_pbsv_14170:HG2_PB_pbsv_14211:HG4_PB_HySA_20687:HG2_PB_assemblyticsPBcR_6891:HG2_PB_SVrefine2Falcon1plusDovetail_3073:HG4_PB_SVrefine2Falcon1Dovetail_8627:HG4_Ill_GATKHCSBGrefine_9774:HG3_PB_SVrefine2PBcRDovetail_6691:HG3_PB_SVrefine2Falcon1Dovetail_8584:HG3_Ill_GATKHCSBGrefine_9373:HG2_Ill_GATKHCSBGrefine_9470:HG2_PB_SVrefine2PBcRplusDovetail_2903:HG2_PB_HySA_25892:HG3_PB_HySA_21405:HG4_Ill_MetaSV_1381:HG3_Ill_MetaSV_1418;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9470:HG3_Ill_GATKHCSBGrefine_9373:HG3_PB_SVrefine2Falcon1Dovetail_8584:HG3_PB_SVrefine2PBcRDovetail_6691:HG4_Ill_GATKHCSBGrefine_9774:HG4_PB_SVrefine2Falcon1Dovetail_8627;NumExactMatchSVs=6;ClusterMaxShiftDist=0.216393;ClusterMaxSizeDiff=0.216393;ClusterMaxEditDist=0.267769;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=315;DistBack=-30;DistForward=0;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:78651672-78651687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1487.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:43:0|1:21:1:0:48:1|0:0:9:31:0:0/1:41:17:0/1:6:18:.:.:.
chr13	79259787	HG2_PB_SVrefine2PBcRplusDovetail_2905	A	ATAAACAGTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCATCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCAAGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCACCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTACTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCAGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGAT	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_9137:HG4_PB_pbsv_14173:HG2_PB_pbsv_14214:HG2_PB_assemblyticsPBcR_6896:HG3_PB_pbsv_13884:HG2_PB_HySA_25896:HG4_PB_SVrefine2Falcon1Dovetail_8629:HG4_PB_SVrefine2PBcRDovetail_7092:HG2_PB_SVrefine2PBcRplusDovetail_2905:HG2_PB_SVrefine2PB10Xhap12_10265:HG2_PB_SVrefine2Falcon2Bionano_7072:HG2_PB_SVrefine2Falcon1plusDovetail_3075:HG3_PB_SVrefine2PBcRDovetail_6693:HG3_PB_SVrefine2Falcon1Dovetail_8586:HG4_PB_HySA_20691:HG3_PB_HySA_21414:HG2_PB_PB10Xdip_9138;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_2905:HG4_PB_SVrefine2PBcRDovetail_7092;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0617861;ClusterMaxSizeDiff=0.0612669;ClusterMaxEditDist=0.203988;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1880;DistBack=26333;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=13:79259788-79259793;PctSeqSimilarity=0.9997;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:6:0:24:1/1:0:12:0:8:1/1:0:26:1/1:17:556:.:2002:.
chr13	79271585	HG3_Ill_MetaSV_1419	G	GAGAAATGGGCATATTCGGCCGGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4500:HG2_PB_pbsv_14215:HG2_PB_HySA_25898:HG3_PB_pbsv_13885:HG2_PB_assemblyticsPBcR_6897:HG3_PB_HySA_21415:HG4_PB_pbsv_14174:HG2_PB_HySA_25897:HG4_PB_HySA_20692:HG4_PB_SVrefine2PBcRDovetail_7093:HG4_PB_SVrefine2Falcon1Dovetail_8630:HG4_Ill_MetaSV_1382:HG4_Ill_GATKHCSBGrefine_9776:HG3_PB_SVrefine2PBcRDovetail_6694:HG3_PB_SVrefine2Falcon1Dovetail_8587:HG3_Ill_MetaSV_1419:HG3_Ill_GATKHCSBGrefine_9375:HG2_PB_SVrefine2PBcRplusDovetail_2906:HG2_PB_SVrefine2PB10Xhap12_10266:HG2_PB_SVrefine2Falcon2Bionano_7073:HG2_Ill_MetaSV_1301:HG2_Ill_GATKHCSBGrefine_9472:HG2_10X_SVrefine210Xhap12_9880:HG2_PB_SVrefine2Falcon1plusDovetail_3076:HG2_PB_PB10Xdip_9140:HG2_PB_PB10Xdip_9139;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9880:HG2_Ill_GATKHCSBGrefine_9472:HG2_Ill_MetaSV_1301:HG2_PB_SVrefine2Falcon2Bionano_7073:HG2_PB_SVrefine2PB10Xhap12_10266:HG2_PB_SVrefine2PBcRplusDovetail_2906:HG3_Ill_GATKHCSBGrefine_9375:HG3_Ill_MetaSV_1419:HG3_PB_SVrefine2Falcon1Dovetail_8587:HG3_PB_SVrefine2PBcRDovetail_6694:HG4_Ill_GATKHCSBGrefine_9776:HG4_Ill_MetaSV_1382;NumExactMatchSVs=12;ClusterMaxShiftDist=0.172043;ClusterMaxSizeDiff=0.172043;ClusterMaxEditDist=0.239645;PBcalls=18;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=319;DistBack=761;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:79271586-79271601;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1490.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:84:1/1:0:20:1:25:1/1:0:11:1:9:1/1:0:26:1/1:3:96:.:.:.
chr13	79774273	HG2_Ill_MetaSV_1303	C	CAAAAAGTCTTCAATATTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGCGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAGGGCGTGACCCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_14218:HG4_PB_HySA_20698:HG4_PB_pbsv_14177:HG3_PB_SVrefine2Falcon1Dovetail_8589:HG2_Ill_GATKHCSBGrefine_9474:HG2_PB_SVrefine2Falcon1plusDovetail_3078:HG2_Ill_MetaSV_1303:HG4_PB_SVrefine2Falcon1Dovetail_8632:HG2_PB_HySA_25904;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_MetaSV_1303;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0707965;ClusterMaxSizeDiff=0.0633803;ClusterMaxEditDist=0.234079;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=286;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:79774274-79774288;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1491.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:42:0|1:28:1:2:35:0|1:18:0:0:10:0/1:23:10:./.:.:.:.:.:.
chr13	80199078	HG2_PB_SVrefine2Falcon1plusDovetail_3082	T	TAAGAAGTACAGGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_25916:HG2_Ill_breakscan11_4501:HG4_PB_pbsv_14185:HG4_Ill_MetaSV_1385:HG2_PB_pbsv_14225:HG2_PB_SVrefine2Falcon2Bionano_7077:HG2_PB_SVrefine2Falcon1plusDovetail_3082;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3082:HG2_PB_SVrefine2Falcon2Bionano_7077;NumExactMatchSVs=2;ClusterMaxShiftDist=0.151057;ClusterMaxSizeDiff=0.151057;ClusterMaxEditDist=0.26361;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=345;DistBack=17303;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=13:80199079-80199092;PctSeqSimilarity=0.9943;PctSizeSimilarity=0.9885;PctRecOverlap=0.9885;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1492.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:30:./.:7:17:25:3:0|1:21:0:0:9:0/1:33:9:0/1:6:39:.:.:.
chr13	80994340	HG2_PB_PB10Xdip_9148	A	ACTCTCCCCCATCTCCCCACTTCTCCCCATCTCCCCACTTCTCCCCCATCTCCCCCCATCTCCCCCTTCTCCCCCCATCTCCCCCATCTCCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCATCTCCCCACTTCTCCCACATCTCCCCACTTCTCCCCCATCTCCCCACTTCTCCCCATCTCCCCATCTCCCCACTTCTCCCCCATCTCCCCACTTCTCCCCATCTCCCCATCTCCCCACTTCTCCCCCCATCTCCCCACTTCTCCCCCATCTCCCCACTTCTCCCCATCTCCCCACTTCTCCCACATCTCCCCACTTCTCCCCCATCTCCCCACTTCTCCCCATCTCCCCACTTCTCCCCCATCTCCCCCCATCTCCCCCCATCTCCCCCCATCTCATCTCCCCCCTTCTCCCCCGTTCTCCCCCGTTCTCCCCCGTTCTCCCCCGTTCTCCCCCGTTCTCCCCCATCTCCCCCATCTCCCCCATCTCCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10275:HG3_PB_HySA_21438:HG2_PB_HySA_25922:HG4_PB_HySA_20712:HG3_PB_pbsv_13891:HG2_PB_PB10Xdip_9149:HG2_PB_PB10Xdip_9148:HG4_PB_SVrefine2Falcon1Dovetail_8639:HG3_PB_SVrefine2Falcon1Dovetail_8594:HG3_PB_SVrefine2PBcRDovetail_6698:HG2_PB_SVrefine2Falcon2Bionano_7079:HG2_PB_SVrefine2Falcon1plusDovetail_3085:HG2_PB_SVrefine2PB10Xhap12_10276:HG2_PB_SVrefine2PBcRplusDovetail_2912;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_9148:HG2_PB_PB10Xdip_9149;NumExactMatchSVs=2;ClusterMaxShiftDist=0.1477;ClusterMaxSizeDiff=0.1477;ClusterMaxEditDist=0.246973;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=774;DistBack=-28;DistForward=7;DistMin=-28;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=391;REFWIDENED=13:80994156-80994546;PctSeqSimilarity=0.9572;PctSizeSimilarity=0.9171;PctRecOverlap=0.9172;SizeDiff=-70;StartDistance=-8;EndDistance=-8;GTMatch=1;TruScore=93;MatchId=1493.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:./.:0:0:1:1:./.:13:42:21:69:./.:0:0:0/1:4:30:.:.:.
chr13	82268302	HG3_Ill_GATKHCSBGrefine_9385	A	ATTTATATTTTATATTATATAATATATATTATATATAAAATAAAATATAATATATATTATATATATTATATTTTATATTATATATAATATATATTATATAATATAAAATATATATATTATAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7084:HG4_PB_SVrefine2PBcRDovetail_7105:HG3_PB_assemblyticsfalcon_7174:HG2_PB_PB10Xdip_9171:HG2_PB_SVrefine2Falcon1plusDovetail_3091:HG3_PB_pbsv_13898:HG2_PB_PB10Xdip_9170:HG4_PB_pbsv_14199:HG4_Ill_manta_3348:HG4_Ill_MetaSV_1390:HG3_PB_SVrefine2Falcon1Dovetail_8601:HG3_Ill_scalpel_13698:HG3_Ill_GATKHC_22617:HG3_Ill_GATKHCSBGrefine_9385:HG3_Ill_250bpfermikitraw_18465:HG3_Ill_150bpfermikitraw_17968:HG2_Ill_manta_3933:HG2_Ill_GATKHC_22734:HG2_Ill_GATKHCSBGrefine_9485:HG2_Ill_250bpfermikitraw_19009:HG2_Ill_150bpfermikitraw_17924:HG2_PB_pbsv_14235:HG4_PB_SVrefine2Falcon1Dovetail_8645:HG3_PB_SVrefine2PBcRDovetail_6703:HG3_Ill_SVrefine2DISCOVARDovetail_10220:HG2_PB_SVrefine2PBcRplusDovetail_2917:HG2_PB_SVrefine2PB10Xhap12_10284:HG2_Ill_SVrefine2DISCOVARplusDovetail_3433:HG4_Ill_scalpel_13135;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17924:HG2_Ill_250bpfermikitraw_19009:HG2_Ill_GATKHCSBGrefine_9485:HG2_Ill_GATKHC_22734:HG2_Ill_manta_3933:HG3_Ill_150bpfermikitraw_17968:HG3_Ill_250bpfermikitraw_18465:HG3_Ill_GATKHCSBGrefine_9385:HG3_Ill_GATKHC_22617:HG3_Ill_scalpel_13698;NumExactMatchSVs=10;ClusterMaxShiftDist=0.358974;ClusterMaxSizeDiff=0.358974;ClusterMaxEditDist=0.359447;PBcalls=14;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=121;DistBack=-100;DistForward=29;DistMin=-100;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=166;REFWIDENED=13:82268242-82268407;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1494.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:45:1/1:3:14:1:12:./.:0:6:0:4:1/1:0:49:./.:.:.:.:.:.
chr13	82367697	HG2_PB_HySA_25952	A	ATAGGTTAAGACTTTTTTTTTTTTTTTTTTTAATTTTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGATACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCATTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCAGGCAGAGGGGCTCCTCACCTCCCAGTAGGGGCGGCCGGGCAGAGGCGCTCCTCACCTCCCGGACGGGGCAGCTGGCCGGGCAGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGCGGAGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGGCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGAAGGGGCGGCTGACCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGGCCCCCCCTACCTCCCTCCCGGACGGGGGCGGCTGGCGGCGGCGGCGGGCGGGGTCCTCACTTCCCAGTAGGGTGGCCGGGCAGAGGCACCCCTCACCTCCCAGACAGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGAAGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAATAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGCGGCTGGCCGGGCCGAGGGGCTCCTCACTTCCCAGTAGGGGCAGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGCACGGCTGGCCGGACGGGGGGGCTGACCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGTGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGCTGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACCTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGATGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCGGCCGGCCGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGTTGGCGGATCACTCGCGGTTAGGGGCTGGAGACCGGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAACCAGTCAGGCGTGGCGGCGCGTGCCTGCAATCGCAGGCATTTGGCAGACTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGCAGTACAGTCCAGCTTCGGCTCCGCATGAGAGGGAGACCGTGGAGAGGGAGAGGGAGAGGGAGAGGGAGCGGGAGAGGGAGAGGGAGAGGGAGAGGGGTGGCTTTTAAAGCTTGTTATTTGTGGCCGAGTGTGATGGCTCC	10	PASS	ClusterIDs=HG2_PB_HySA_25952:HG2_PB_pbsv_14237:HG3_PB_pbsv_13900:HG4_PB_HySA_20732:HG4_PB_pbsv_14201:HG2_PB_assemblyticsPBcR_6932:HG2_PB_PB10Xdip_9174:HG2_PB_PB10Xdip_9175:HG4_PB_HySA_20731:HG3_PB_HySA_21446:HG2_PB_SVrefine2Falcon2Bionano_7085:HG4_PB_SVrefine2PBcRDovetail_7106:HG2_PB_SVrefine2PB10Xhap12_10285:HG2_PB_SVrefine2PBcRplusDovetail_2918:HG4_PB_SVrefine2Falcon1Dovetail_8646:HG3_PB_SVrefine2PBcRDovetail_6704:HG3_PB_SVrefine2Falcon1Dovetail_8602;NumClusterSVs=17;ExactMatchIDs=HG2_PB_HySA_25952;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0781032;ClusterMaxSizeDiff=0.0777047;ClusterMaxEditDist=0.221347;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=2553;DistBack=10722;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=13:82367698-82367711;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9992;PctRecOverlap=0.9992;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=1495.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:119:1/1:0:22:0:34:1/1:1:7:1:8:./.:2:31:1/1:8:491:.:2390:.
chr13	82485277	HG2_PB_PB10Xdip_9176	C	CAAAAAAAAAAAAAAAAAAAAGAGAACCTGAGGTGTATGGTGACCGTCTCAAAAA	10	PASS	ClusterIDs=HG4_PB_pbsv_14202:HG2_PB_PB10Xdip_9177:HG3_PB_HySA_21449:HG2_PB_PB10Xdip_9176:HG4_PB_HySA_20733:HG2_PB_HySA_25955:HG3_PB_pbsv_13901;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_9176;NumExactMatchSVs=1;ClusterMaxShiftDist=0.160714;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.336283;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=54;DistBack=27;DistForward=15274;DistMin=27;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=84;REFWIDENED=13:82485240-82485323;PctSeqSimilarity=0.973;PctSizeSimilarity=0.9818;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1496.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:63:1/1:1:40:3:32:./.:1:12:5:5:./.:0:0:./.:.:.:.:.:.
chr13	84862056	HG2_Ill_250bpfermikitraw_19028	G	GATATATATGTGTGTGAGATATATATATATATCTCACACACATATATATGATATATATGTGTGTGAGATATATATATATATCTCACACACATATATATC	20	PASS	ClusterIDs=HG3_Ill_Krunchall_18992:HG2_PB_pbsv_14254:HG4_Ill_250bpfermikitraw_18769:HG4_PB_pbsv_14218:HG2_PB_SVrefine2Falcon2Bionano_7090:HG2_Ill_250bpfermikitraw_19028:HG2_Ill_150bpfermikitraw_17942:HG2_PB_PB10Xdip_9193:HG4_PB_SVrefine2Falcon1Dovetail_8656:HG3_PB_pbsv_13915:HG2_PB_HySA_25988;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17942:HG2_Ill_250bpfermikitraw_19028:HG2_PB_SVrefine2Falcon2Bionano_7090:HG4_Ill_250bpfermikitraw_18769;NumExactMatchSVs=4;ClusterMaxShiftDist=0.256684;ClusterMaxSizeDiff=0.245989;ClusterMaxEditDist=0.31016;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=98;DistBack=33;DistForward=57552;DistMin=33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=63;REFWIDENED=13:84862004-84862066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1498.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:40:0|1:31:2:3:32:./.:20:1:6:19:0/1:23:13:./.:.:.:.:.:.
chr13	84919609	HG2_10X_SVrefine210Xhap12_9907	TGATCTTTTAT	CCTCTTCAACATGGTATTGAAAGTCCTAGCCAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCCGAATCGGTAAATAGGAAGTCAAACTGCCACTGTTTGCTGATGATATGATTGTTTACCTTGAAAATGCAAAAGATTCCTCCAGAAAGCTCCTGGAACTAATAAAATAATTCCACAAAGTTTCCAGATACAAGATTAATCTACACAAATCAGTATCTCTTCTATACACCAACAGTGACCAAGCAGAGAATCAAATCAGAACTCAACCTCATTTACAATAGCTACAAAAAAAAATTGAATACTTAGGAATATACCTAGCCAAGGATGTGAAAGACTTCTATAAGGAAAACTACAAAACACTGCTGAGGGAAATCATAGATGACACAAACAAATGGAAACACATCCTATGCTCATGGATGGGTAGAATCAATATTGTGAAAATGACCAGACTGCCAAAAGCAATCCACAAATTCAGTGTAATCCCCATCAAAATACCATGATCATTCTTCACAGAACTAGAAAAAACAATTCTAAGATTCATATGAAACCAAAAAAGACCCCACATAGCAAAAGCAAGACCAAGCAAAAAGAACAAATCTGGAGGCATCACACTACCTGATTCAAACTACACTGTAAGGCCATAGTCACCAAAACAGCATGGTACTGGTATAAAAATAGGCACATAGACCAATGGAACAGAAGAGAGAACCCACAAATAAAATCAAATATTTACAGCCAGCTGATCTTCAAGAAAGCAAACAAAAACATAAAGTGGGGAAAGGACACCCTTTTCAACAAATAGTGCTGGGATAATTGGCTAACCACATGTAGGAGAATGAAACTGGATCCTCATCTCTCATCTTTTACAAAAATCAACTAAGGATGGATTAAGGACTTAAATCTAAGACCTAAAACTATAAAACTTCTGGAAGATAACATTGGAAAAACCCTTCTAAACATTGGCTTGTGCAAGGATTTCATGACCAAGAACCCAAAAGCAAATGCAATAAAAAAACTAAATAGCTGGGAGTTAATTAAACTAAAGAGCTTTTGCAGGGCAAAGGGAAGTTTCAGCAGAGTAAACAGACAACCCACAAAATGGAAGAAAATCTTTGCAATCTATACATCTGACAAAGGACTAATATTAAGAATCTACAATGAACTAGTCAAGTCAACAAAAAACAAACAAAAAATCCTATCAAAAAGTGGGCTAAGAACATAAACAGACAATTCTTAAAAGAGGGTATACAAATGGCCATCAAACGTATGAAAAAATACTCAACATCACTAATGATCAGGGAAATGCAAATCAAAACCAGAATGTGATATCACCTTACACCTGCAAGAATGGCCATAATCAAAAAACCAAACAGCAGTTGATGTTGGCGAGGATGTGGTGATCAGGGAACACTTCTACACCGTTGGTAGGAATGTAAACTAGTACAACCACTATGGAAAACAGTATGGAGATTCCTTAAAGAACTGAAAGAATTACCATTTGATCCAGCAATCTCACTACTGGGTATCTACCCAGAGGACAAGAAGTCATTATACAAAAAGAGATACTTGCATACGCATGTTATGGCAACACAATTTGCAATTGCAAAATCATGGAACCAACCCAAAAGCCCATCAATCAACCAGTGGATAAAGAAACTGGTATAAATATACAATGGAATACTACTCAGCCATAAAAAAGAATGAATTAATGGCATCTGTAGTGACCTGGATGAGATTGGAGACTATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAACGTTGTATGTACTCACTGATATATAGGAGCTAAGCTATGAGGACACAAAGGTGTGAGAATGATACAATGGACTTTGGGGACTTGGGGGGAAGGATATGAGGGGGGCGAGGGATAAAAGACTACAAATAGGGTGCAATGTATACTGCTCTGATGATGGGTGCACCAAAATCTCACAAATCACCACTAAAGAACTTACTCATGCAACCAAACACCACATGTACCCCAATAATCTATGGAAAAATAATATATATACATTATAAATATAATTATGTTTCTATTATATTTGTAAACAATAATTTTTACCTACTTAAAATTTCTTAGGACATTAATTAGATATAAAGTTAACAAATCTCTTTTGCTCCTTCTCCCATTCTCCCTACCTCAATTATAAGAGATTCTGTGTTTTAGGTTCCTAAATGCTAATGCTGGTTGCTATACATTTTCTAATATTAGGAAGAATTTCCCACATATTAAACAATTTGTATAAACAAGACCGTAGAAATGTTTTAACATATGACTATGAGTCTTTCCAGTGATTAAGTTCCTAGGTACTAGAGTGGTCTTTATATGATGAGTTCTACTGTCTATGTCTCTGTTCCTTCTTCTTCCTGCTTAAACAAGTATGAAACCTATATTCCGTTTACTTAGTGTGGCTCTGGAAACATTCTTACTATCTGTTTTTTGAGGGTTTCCGGTGGTCCTAGTTAATCAGCCTCCCCAGAAGCAATGTTTTTTCTTTCAGGCTGCTTCCAGTCAAAGATGAGCCTTAGACATCATCTGGTGCTCAAGCAGTTTATTTTGGCAGCGCTCTTACAAGACAGATAGCAGGAACAGGCCATGGCATTGGGCAGATACAACCAGGGTATCGGTTTACCCCCTGACCAGAAGCGTTTCTGTGCAGAGACCATTCTCAGAGTTTGGGGGTTCTTCCCCTTTTCTTATTCCTGTATTCAGTCCGGGTAAATAACCAGGTGTTTCTTACATAAAGAGGATGTAAGCTATAAGGGTAAGCTTTGCTGTAAGGTTTATGAGACTAGCATCTGTACTAAACTACACTTATCCGCTGGAACTCTGTGGTTCAGCATTGGAAATCGCCAGGCTAAGTTGCATTATATAGCTGAATGAAACACAGTATTGGCCCTGCAAGTTGTTTGCATGGGGCTAATGGCTATCATTAATCTTATGTCTCTTATTGTATATTGGGGTCCACCCACTGACCCTGAAGGATTCAGTTATCAAGAGACTGCCCACCTGAACTTGAAAGAATACCCAATAGTCAGTTAAATCTTGAGAAGTGGAACTTGTGAGAGAGGGTGAGGAGGAGCCACAACATGAAGAATACCAAGAGGAAATAATAGAAAGCTCTGAACATTGGTGAAGATTTGGAGCTCATCTGCCTGGGTGAGTGGGTGGGCCACATTGAGGTCAAAGAGAATCAGGGGGAATGCGTGAGGCACGTTGGAGATGAGGCAATCAGGGAGACCCTTTCTGCATAGCTGCTAGTAGAGTTCATTCTAATAGCTGTGCAGTAATTGTGATTTCAATTTGCATTTATCTTATGCCTAATCAATTGAAATGGAATTTCTTATGTTTCAGGGCAGTTTGGATATCACTTAGGAAATGACTTTCAATTTGTTGCTCAATTTTTTCTTTTGTTTCGAAAATTTTGAATAGATTTTACCTGTCACTTGTATATTTTAGATGAAGTCCTTTATTATATAAATTAAATGCAAATATTTATAGCAGTCTGTAGATTACCTTTAGTTCTGATACATAGATGTCCCTAAGTTTCAGGTAGTCCAATTTGTCAAACTTTTTATTGTTAGTGCTTTATATGTAGTGAGTTAAGATATAGTTTCCTACAATATAAAGCCTTTATTCCAAGGCCACAGTATATATTTCTGCTTATGTAAATTAGAAAATACTATCAATAATACTTCATAGATTTTTGTGCTAAAATTTCTAAATATTTTGTTAGGCAAATGAATACCTACATATTTATATTGTTCCTATAAATTATATTGTTTTATTGCAGTTTATTTTCTACTGCTTGTTACTAGTATATGACAACACAAATATCCTAGTTGAAAAAAAAGCAGCTTTAGTAAACTTAATTCTAAAGTTTACCTATACATTAGTTTGTATTTTTAATATGCACAATGAAATCAACTCAATTTTTTCTCTACAATCATTATATATTTTATTTATTTTTATTCTTTTTTTATTTTGCATTGGTAGGGACCTTCAGCCTAGTAGAAATGTGGAGGGAAGCAAGGTTTATTTTATTTCCAATCTCAGTGAATGCCTCTATTTTTTTTATACTAAATGTGATGTTTGCTGTATACATTTTTCTAGATACTCTATGAGATTGATACAGTTCTATTCTACTTATAATTTGCAAAGATATTTACCATGTATTAAATGTTATAATAGTTTTGAAATTTATTAAGATAATATGATATTTTTTAAATTTCAGATATTTTAAAATATTAAACCAATTTTTATCAATTTGGTTGAATGTAATATATATTGTAGATGGGATTTATTTTCCGGAGAATGTTTGCAACTGTGTTTCATAGTATTTTTTTCTGCAAATGTTCAATTTTATCTAAATTTTTAAAAATTTGTGGGAAAAAATAGTTTATAATATTCTTATATTGTTACACAAATGCCAGGGAGTTCAGTCTAGGTACTGCTGCTCACTGCACAAAAAGCCAAACACTGAAACAATGAGTATTGCCAGAGAAGAAGGTTTTAATCAGGTGCTACAGCTGAGGAGATGGGAGATTAGTCTAAACTCATCTCCCTGACAGACTACAATTAGGAGTTTATATAGCAGTGAAGAAATAGAACTACGTGTGGGAAAACATGAACTACAGAGGAGTAAGCAAGAAGAGGAGTGGGTCAACAAGACGCAGATGGTTGGTTAGGAAGCAATCAAAGCAAATGAGGGGTTTGGCATCTCTTTGCCTGGTTATGGTGTCTGGTGAGTTTCAGTTCTTTGATACTTTTTGAGGGAACTGAGAGTCCTTTCCTGAGGAAGGAACTCAGATAAAACAAAGGTAAGTTTCAAGCTTTAAGACCAGAAAGGTCAATTGCTATGTTTATCAAAAAAGCCGTATATGGGACTATTAGGTCAGTTTCAATATTATCTTTTTAGTGTCTATGAAGTCTATAATGATATCTTGTTTTAACTCCTGAATTTGGAAATTGTGTCTTCTCTAATTTTTCCTTAGTCAGTCTTACCAGGCTTCATCAATTTTATTACTCTGTTAAGAGAACCACAACTGAGTTGCTGATATTTTCTAATACATATTTGTATCCTATGCTGTATTAATTTATTCTATTGTAATTATTATATCTTTATTTCTACTTTCATTGCATTTAATTTGCTTTCAGTTGTCTAATTTTTGAAGATGGATACTTTATTACTAATTTTCAGACTTTATTTTCTATAGGGGATACATATATTTGTATACACATATCCCTATATATCCATACATATATTCCTTACACACACACACACACACACACACACATACTTTAAGGGTAACTTTTGGAGCAGTATACATGTTCTAAGTTATATTTTATTAAATATACATTCAAAATATTTTTCTAATTTTAATTCTTTACCAATGAGATTTTAGACACATATATCTTCATTTCCAAACATATATAGATTTTGTTTTTAGTTATCTTTTAAAAATTTGATTTCTATATTGATTTTAGTGGATAAGAATACGTACTTTATATGTTGTAATCCTTTGAAACATATTGAGACTTGCTATGTGACCCAGAATAACAACAACAAAAGTGAGTTTAGCAGTTTTTGGAAACAGACTTTGTGTGCATATAGTCACTTAGTACTTAGCTCAATTTTGTTTTTCATTCTTTCTTAATGGCTATATAATGCTTAGAGATGATTTGCTAGAGATATATGTTAAATAAGATTATACAATTCTTATTATTTCTTTTTAATTTTTGCTTATATATTTTAAGATTTAGTTACTCCGCATATTTTCTTCTACCTTTGTTTCAGTTCATTAATTTCCTTATCAATTATATCTGATGAATAATGAAACCTATTCATTAAGTGCTTACTTTCAGTTTTTTTATTTTTACTTCTATAATGTCAACTTATTATGTTTAAAATTATAGTTCTCTGTTGAAAATCATTAGCTTGCCTTTTAATTTTGATCACATTAGTAAAAGTAATTTTAAAATATTAGTCGAGCTTACTCAATACCTGTACCCACTGTAAATTTGATATTATTTTTCCACTCTCTTTCTGTGTTTAGGCATGTTAAATTAGTGTGGAATATTTTGTATTAAAAATTCTAGAGACAATTTGAAACTTTATATTTTATTATATTTTTCATACAGATGATTTACTAAAAGAACTTAGGGTGAGGTAAGATGGCCTTAAACAAATGAGAACCTGTGTTAAAGGTTTTAAAGTTGAGTTTTAAAACTAATGTGGAGTTGGATTTTTTTAAATAAAGCCAGATAAAAGCATTAGTTTAGCTCCATCCAGGAGATTAATTTGTTTTCCACAATAAAACTAACAAATTCAGATAGCAACTTTTACCAATCTCCACTTGATGTCTCCTCATTTTGTACCTTAGGACTATGTATTTTTGTGTCTAGCATGCTTCTTTATCAAAATGTGGCATATTTGTCACTTCATATATTTGCCTTTTTCAGAATTCAAACAAGTCTCTTAGTTGTTTATAAGTTATAAACAGCCTAGTGTGGTGATTTAGTAATTGGATTCACTAATTTATACACGACTTTCTAGTCCAGTCTAAAACATCTACAACTTATTCTGATTATTGCTCCATTATTGAAGATAACTGCCTGAATGTTACATATCCAACAAATGTGTCTGTACAATCTAAACAAGTTAACCACTTCGGGACAAGTGGAACAATCAAATATTCAATTAGGAAAAAAAAATGTTGGTTATCAAAATTTGGCCAAGCTATCTATAGGATTAATTCTTTTAGGTGAGTGTACACCAATAAAACAAAACAAAACTAAATAAAAATAAGTTTCTGAATGTTGCCTAATATATTTGTGATTGTACAAATAATTTTTGCCTTCCTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAACGGGATCTAATTAAACCAAAGACCTTCTGCACAGCAAAATAAACTACCATCAGAGTGAACAGCAACCTACAAAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAGACACACGAAAAAATGCTTATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATCTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAAGGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCACAAGGACAAAAAACCAAACAGCGCACGTTCTCACTCATAGATGAGAATTGAACAATAACACATGGACACAGGAAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGAGAGGGGAGGGATAGCATTAGGAGATATACCTAAAGCTAAATGACGAATTAATGGGTGCAGCATTAGATATACCTAATGCTAAATGACGAATTAATGGGTGCATGGCACATGTATACATGTGTAACTAACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTGTAATAATAATAATAATTTTTGCCTTCCTCTGCTTTGTGATATACAGGTGATTAAACATTTATTTCCTTTGATAACTTGTATCTGTCATCCAGCAGATGGTATGTCATAAAAAGACTTCAGCCTCCATGGTCAATTTGGCTCCTCTGGGACCTGAGTTTGACCCAAAGGAAAGACTGAGGGATTACTATGAGGGAAACGGCACAATCCTGGCTTACCTAGCAGAGATGGTAACAGATGGGTACCAGTGCCCATTACCCAGAGATAAACAAAACATGTAGCTTTTATAGTTGAAATCACAATTTTTTTTTGAAACACTGCAGATTATTGAAATTGCTTTCCCTAATAACTGTGTTGATCTACTTTAGAGCAGGCTGCTAAGCCCTGGTGGTTTTTTATCAGGGCTTAGAAAAAGAAATGTAAACAAACACAAGAACACAACAGAACACAGCTCATTGTCCCACAGGCTGTTTTGTAAACTCTGCTTTGCTTTTGTTCACTTACTATTATATAACTGATAATTTACCTTGTATATAAAGAAATTCAGCTGTATGTTCTACTAAACTAATTCTGGATTATTTTTTGACAAGTTGGATACGAACTAAATCAAGCTTCTAGAGTTAATGTCACCTAACACAAAACAGAAGGTAGAAGAACAAATGACATCAATCAATAAATAAAATTATAAAATATGAGAAATCTAAAAGAGAATTGGTCTGGACTTCGCAACAATCAATAGTAGAAACTAAAAGCAAGGAAGGGTACTTTATTCCACACCAAGAGACTTACGTTGTACAATAACCAAACATAATGGGAATACCTTATATGGGTTCGGATTAAAACAACAACCATAGAAATTAATTGTATTGAGATTATTGGGGACATTTAATTATGGTTTAGTTATTACATGTCAGCAAAGAAGTATTATAAATATTTAAATGATTTGATAATTGTTGCATTTGGGTTATAAATGTATAGTGGTTAATTTTATACTGTTTTCTCAGCTTTTGACTGGAAATTTTCATAATTATATTAATTTTAAAAATTAATGTCAGTGTGCCTATACTTCTTAAAATTCTTCAATAGATTTTCAGAAATACTTCTGAAAATTTCAAACTTCTTCATCTTCAAATAAGGTCTTTTATGAAATCTTAATATAAGTTCTTACTTGTCTGATTTCACCACTCACTCTTACACAGTCACTCAAACAAAACTGCTTGAAGTTTCACAAAACGTCATTATATGTCACAGCTGTTTGCCATGGCACAGGTTGTACTCTCCATCTGGCATGTCTCTACCTTTTTTTTTAATACTATTTAAGAGCATGTATTAGGATTATTACAATCTTGCTACAAGGGAAATAACCTCTGACGGAATAGTAGAAAAATTCACTCTTAGTTTGGACATTTTATAGAAAAAAGAGAATGTTACATAATAATCATTAGATGGACAAGAAAATGTATATCTAGGTAAAGACTTTTAGATTTTGAGTAAGACATATATGACAATCACTTGTGCAGCTGTATGGAGGTAATATCCATTGTGTAAAATTTTGCATTTATGTAAATTTTGCATTTATATAAAGCAACTGGCAAATTCTGTGTCAGTTCAAGAGTTACCCTGATCTAAAATATTTGCTTTGTTTCCAATTTCATAGGCATTTCTTTCTTTGTGCTCCAATGACCTCATGCTTACTTCAGGACACCTTACTTGTTAATTTCCTTTATTTTCTTCTGCAGATTATAATTAGTTTGAAGGCCTGGATAATTTGCTTTGATGACTTATAACATTGAACCTGGCAGAAGAGCTGACTTACTCTACATACTACATAGGCATTTGGGAGATTATTTTTGAATTGAATGACTTAGTTATTTAGAGGTTAATAATAGTGTGAGGATATATACGTATATTTCAGCTAATATTTTTGTCTATTAAAATGTCAATTTTCAATAATTGACAATTAAAATCTTTTTATGTATATTCTCCTTGTAGTGAGTAACTCTGGTATTCTTTTAAAGATAATCAGGACTATGCTGGCTCTGAAAGTTTATCTTGGCCTTTGCATATTTTATTGCAAAAGCAGTTCAAAAGCACAGTCATTAATATACACCAGTTCCGGGCTTCCATCTCAAAAGCTTTGATAATACTTAGGTCTTTGAGTTGTAAAAATTCCCTAGGGAACTGGAAATACATTCTTATGA	20	PASS	ClusterIDs=HG2_PB_HySA_25989:HG4_PB_pbsv_14219:HG2_PB_HySA_25990:HG2_PB_SVrefine2Falcon2Bionano_7091:HG4_PB_SVrefine2Falcon1Dovetail_8657:HG3_PB_SVrefine2Falcon1Dovetail_8610:HG4_PB_SVrefine2PBcRDovetail_7116:HG3_PB_SVrefine2PBcRDovetail_6711:HG2_PB_SVrefine2PBcRplusDovetail_2929:HG2_PB_SVrefine2PB10Xhap12_10298:HG2_10X_SVrefine210Xhap12_9907:HG2_PB_SVrefine2Falcon1plusDovetail_3104;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9907:HG2_PB_SVrefine2PB10Xhap12_10298:HG2_PB_SVrefine2PBcRplusDovetail_2929;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0113854;ClusterMaxSizeDiff=0.0112872;ClusterMaxEditDist=0.120528;PBcalls=11;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=10157;DistBack=-5;DistForward=-1;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:84919620-84919608;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9999;PctRecOverlap=0.999;SizeDiff=1;StartDistance=-6;EndDistance=4;GTMatch=0;TruScore=99;MatchId=1499.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:76:1/1:0:12:0:10:1/1:0:9:0:6:1/1:0:44:1/1:0:714:.:9900:.
chr13	85308194	HG2_Ill_Krunchall_19376	C	CATATATATATATATAACATGTATATATGTGTATATACATATATATATATATAACATGTATATATGTGTATATACAT	20	PASS	ClusterIDs=HG2_Ill_Krunchall_19376:HG4_PB_HySA_20761:HG2_Ill_GATKHCSBGrefine_9509:HG2_PB_HySA_26002:HG4_PB_pbsv_14226:HG2_PB_pbsv_14261:HG4_Ill_Krunchall_19698;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_Krunchall_19376:HG4_Ill_Krunchall_19698;NumExactMatchSVs=2;ClusterMaxShiftDist=0.089172;ClusterMaxSizeDiff=0.0636943;ClusterMaxEditDist=0.171053;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=26222;DistForward=11200;DistMin=11200;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=81;REFWIDENED=13:85308176-85308256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1500.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:38:./.:16:24:17:8:0|1:26:0:1:21:0/1:21:20:./.:.:.:.:.:.
chr13	85469834	HG3_Ill_250bpfermikitraw_18493	T	TTGCAGTGAGCCGAGATCGGGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTATTTCAAAAATAGAGTCTAATTTTTTTTTTTGAAATAGAGTCTCGCTCTGTCGCCCAGGCTGGAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9202:HG4_PB_pbsv_14227:HG3_PB_pbsv_13919:HG2_PB_pbsv_14262:HG2_Ill_MetaSV_1314:HG4_Ill_GATKHCSBGrefine_9806:HG2_Ill_GATKHCSBGrefine_9511:HG2_PB_assemblyticsPBcR_6961:HG4_PB_SVrefine2PBcRDovetail_7120:HG4_Ill_SVrefine2DISCOVARDovetail_10095:HG4_Ill_MetaSV_1399:HG4_Ill_GATKHCSBGrefine_9805:HG3_PB_SVrefine2PBcRDovetail_6714:HG3_PB_SVrefine2Falcon1Dovetail_8615:HG3_Ill_Spiral_14820:HG3_Ill_SVrefine2DISCOVARDovetail_10228:HG3_Ill_MetaSV_1428:HG3_Ill_GATKHCSBGrefine_9400:HG3_Ill_250bpfermikitraw_18493:HG3_Ill_150bpfermikitraw_17997:HG2_PB_SVrefine2PBcRplusDovetail_2933:HG2_PB_SVrefine2PB10Xhap12_10302:HG2_PB_SVrefine2Falcon2Bionano_7094:HG2_PB_SVrefine2Falcon1plusDovetail_3108:HG2_Ill_manta_3944:HG2_Ill_SVrefine2DISCOVARplusDovetail_3446:HG2_Ill_GATKHCSBGrefine_9510:HG4_PB_SVrefine2Falcon1Dovetail_8662:HG3_PB_HySA_21485:HG2_PB_HySA_26005:HG2_PB_PB10Xdip_9203;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9510:HG2_Ill_SVrefine2DISCOVARplusDovetail_3446:HG2_Ill_manta_3944:HG2_PB_SVrefine2Falcon1plusDovetail_3108:HG2_PB_SVrefine2Falcon2Bionano_7094:HG2_PB_SVrefine2PB10Xhap12_10302:HG2_PB_SVrefine2PBcRplusDovetail_2933:HG3_Ill_150bpfermikitraw_17997:HG3_Ill_250bpfermikitraw_18493:HG3_Ill_GATKHCSBGrefine_9400:HG3_Ill_MetaSV_1428:HG3_Ill_SVrefine2DISCOVARDovetail_10228:HG3_Ill_Spiral_14820:HG3_PB_SVrefine2Falcon1Dovetail_8615:HG3_PB_SVrefine2PBcRDovetail_6714:HG4_Ill_GATKHCSBGrefine_9805:HG4_Ill_MetaSV_1399:HG4_Ill_SVrefine2DISCOVARDovetail_10095;NumExactMatchSVs=18;ClusterMaxShiftDist=0.108949;ClusterMaxSizeDiff=0.101167;ClusterMaxEditDist=0.224806;PBcalls=16;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=122;DistBack=2486;DistForward=26;DistMin=26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=13:85469835-85469862;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1501.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:0:32:3:32:./.:0:5:0:2:./.:1:19:./.:.:.:.:.:.
chr13	85820937	HG2_10X_SVrefine210Xhap12_9910	C	CAGAAGTCAGCAATTTTTATAAATAAGTGGACCAGATTCTCATGTTACTTTTCTCTCTTCTTCTCTTTTAACTCATATCCTTGGCCTCATAAAGGATTTCCTATGAAAAATTGACAGAGGAGAAAAGGTCTTCGCCTTGTTTAAGAGATTGGTTAGTGCACTAAGCTGGCATTTGCTAGGATATGCTTCTGCCATTTTATAGCCCCACCAACGGGGAGTCCTCAAAAACAGTGGTAAAGATAAATCCTTCCACTGGAAAGAGCTAGGAGTAGTACAATTTGTTATCAACTTAATATGAGGAGAGGAATATCTGGAAGGAGAGAGATATATACTAACTATTAGGCACTGACAAATAGCTTTGCCTGTTTTATTAGAAGCCAGTAAAGAAAAATGCTGGGAGAGCTGATAAAATAAGCCTAAGGAAGAGTTATATGGATGGACAAGTTGAAATGGGTATGAAGTGCATTTATTCTGCTGGCTGAAATAATTCTGATTATGGAGAAGATAAAGGTTGCCTTTATACTTATGAGGAATGGG	20	PASS	ClusterIDs=HG2_Ill_Spiral_949:HG4_PB_pbsv_14229:HG2_PB_pbsv_14266:HG3_PB_pbsv_13922:HG2_PB_PB10Xdip_9206:HG3_Ill_GATKHCSBGrefine_9402:HG4_Ill_GATKHCSBGrefine_9809:HG2_Ill_GATKHCSBGrefine_9513:HG3_Ill_SVrefine2DISCOVARDovetail_10229:HG3_Ill_MetaSV_1430:HG4_Ill_MetaSV_1400:HG2_Ill_SVrefine2DISCOVARplusDovetail_3447:HG2_Ill_MetaSV_1315:HG2_10X_SVrefine210Xhap12_9910:HG2_PB_SVrefine2PB10Xhap12_10304:HG4_PB_HySA_20765:HG3_Ill_Spiral_14825;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9910:HG2_Ill_MetaSV_1315:HG2_Ill_SVrefine2DISCOVARplusDovetail_3447:HG4_Ill_MetaSV_1400;NumExactMatchSVs=4;ClusterMaxShiftDist=0.1875;ClusterMaxSizeDiff=0.1875;ClusterMaxEditDist=0.215074;PBcalls=6;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=536;DistBack=0;DistForward=1784;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=13:85820938-85820941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1502.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:39:0|1:46:0:0:31:./.:26:0:1:19:0/1:26:11:0/1:13:40:.:.:.
chr13	85871613	HG2_PB_PB10Xdip_9207	AA	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGTGATATTCTCTTTTTGATAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4504:HG2_PB_SVrefine2PB10Xhap12_10305:HG2_PB_PB10Xdip_9207:HG4_PB_pbsv_14230:HG3_PB_pbsv_13923:HG4_PB_assemblyticsfalcon_7117:HG2_PB_pbsv_14267:HG3_PB_assemblyticsfalcon_7207:HG2_PB_HySA_26011:HG2_PB_assemblyticsPBcR_6966:HG4_PB_HySA_20767:HG2_PB_SVrefine2Falcon1plusDovetail_3110:HG4_PB_SVrefine2PBcRDovetail_7122:HG4_PB_SVrefine2Falcon1Dovetail_8664:HG3_PB_SVrefine2Falcon1Dovetail_8618:HG3_PB_HySA_21491:HG2_PB_SVrefine2PBcRplusDovetail_2935;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_9207:HG2_PB_SVrefine2PB10Xhap12_10305;NumExactMatchSVs=2;ClusterMaxShiftDist=0.167229;ClusterMaxSizeDiff=0.167229;ClusterMaxEditDist=0.240054;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=744;DistBack=1;DistForward=35601;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:85871615-85871612;PctSeqSimilarity=0.9781;PctSizeSimilarity=0.9563;PctRecOverlap=0.9576;SizeDiff=-34;StartDistance=12;EndDistance=13;GTMatch=0;TruScore=96;MatchId=1503.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:32:0|1:29:1:1:33:0/0:25:0:6:0:0/0:42:2:0/1:20:76:.:.:.
chr13	86166447	HG3_PB_SVrefine2Falcon1Dovetail_8620	GA	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTATTTGT	20	PASS	ClusterIDs=HG2_PB_HySA_26018:HG4_PB_HySA_20773:HG3_PB_SVrefine2PBcRDovetail_6718:HG2_PB_SVrefine2Falcon2Bionano_7099:HG2_PB_SVrefine2PB10Xhap12_10306:HG2_PB_PB10Xdip_9212:HG3_PB_assemblyticsfalcon_7212:HG3_Ill_GATKHCSBGrefine_9407:HG3_PB_SVrefine2Falcon1Dovetail_8620:HG2_PB_assemblyticsPBcR_6972:HG2_PB_SVrefine2PBcRplusDovetail_2937:HG2_PB_PB10Xdip_9213:HG4_PB_pbsv_14235:HG3_PB_pbsv_13925:HG2_PB_pbsv_14272:HG3_PB_HySA_21498;NumClusterSVs=16;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8620:HG3_PB_assemblyticsfalcon_7212;NumExactMatchSVs=2;ClusterMaxShiftDist=0.258462;ClusterMaxSizeDiff=0.252308;ClusterMaxEditDist=0.3367;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=172;DistBack=1;DistForward=3062;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:86166449-86166446;PctSeqSimilarity=0.9916;PctSizeSimilarity=0.9885;PctRecOverlap=0.9771;SizeDiff=-2;StartDistance=3;EndDistance=4;GTMatch=0;TruScore=98;MatchId=1504.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:42:./.:7:22:13:17:1|0:0:12:16:0:0/1:29:7:./.:.:.:.:.:.
chr13	87392947	HG3_PB_SVrefine2PBcRDovetail_6721	T	TTTAACTGAACATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4507:HG4_PB_pbsv_14243:HG2_PB_HySA_26035:HG2_PB_pbsv_14280:HG4_PB_HySA_20784:HG3_PB_pbsv_13930:HG3_PB_assemblyticsfalcon_7222:HG2_PB_assemblyticsPBcR_6981:HG4_PB_assemblyticsfalcon_7125:HG4_PB_SVrefine2PBcRDovetail_7128:HG3_PB_SVrefine2PBcRDovetail_6721:HG2_PB_SVrefine2Falcon2Bionano_7102:HG3_PB_SVrefine2Falcon1Dovetail_8625:HG2_PB_SVrefine2PBcRplusDovetail_2942:HG2_PB_SVrefine2PB10Xhap12_10313:HG2_PB_SVrefine2Falcon1plusDovetail_3115:HG4_Ill_MetaSV_1403:HG4_PB_SVrefine2Falcon1Dovetail_8670:HG2_10X_SVrefine210Xhap12_9914:HG3_PB_HySA_21505:HG2_PB_PB10Xdip_9237;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7102:HG3_PB_SVrefine2PBcRDovetail_6721:HG4_PB_SVrefine2PBcRDovetail_7128;NumExactMatchSVs=3;ClusterMaxShiftDist=0.175379;ClusterMaxSizeDiff=0.175379;ClusterMaxEditDist=0.240678;PBcalls=18;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=295;DistBack=7182;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:87392948-87392963;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9966;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1505.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:72:1/1:2:23:0:33:1/1:0:7:0:11:1/1:0:32:./.:.:.:.:.:.
chr13	87432094	HG4_PB_pbsv_14244	T	TATATATTAATTATTTATATATATTATGCATTAGTATAATATTTATACTATATATTTAATAATATTAGTATTATATACTACAATTATATTATATTAAAATATATTACTATATATTTATATATATATGATAATTTATATATAATATATATCATATAGTATATAATTATATAATAATAATAATTATATATATTATATATAATATATTAATATATATAAATATATTTATATATTATATATATTTATATAAATATAGTTTATATACAATATATTTATATATATACTGTTACTATATATAATATAATTTATATATATTGTATATATATTTATATATATATATTTATATAGATAAATATTTTCTAATATATATTATATATTATATATATTAATTATATATATTATATAAAGAATATGTATTTATATATATTATATATATATATATAATTATTATACGTATAATATATTATATATATATTATATATAGTTATATATAGAATATAGTTATATATATATTAATAGTATATATAATATAAATATATATATATTTATATAATATATATCAATATATAATAATATTTTACACTATTATAAATATATTAAATAATTTATATATAGTTATATATTATATTAATATATAGAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7103:HG3_PB_SVrefine2PBcRDovetail_6722:HG2_PB_SVrefine2PB10Xhap12_10315:HG4_PB_pbsv_14244:HG2_PB_SVrefine2PBcRplusDovetail_2943:HG3_PB_pbsv_13931:HG2_PB_SVrefine2PB10Xhap12_10314:HG2_PB_SVrefine2Falcon1plusDovetail_3116:HG3_PB_SVrefine2Falcon1Dovetail_8626:HG4_PB_SVrefine2Falcon1Dovetail_8671:HG4_PB_SVrefine2PBcRDovetail_7129;NumClusterSVs=11;ExactMatchIDs=HG4_PB_pbsv_14244;NumExactMatchSVs=1;ClusterMaxShiftDist=0.151771;ClusterMaxSizeDiff=0.151771;ClusterMaxEditDist=0.240786;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=637;DistBack=49;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=435;REFWIDENED=13:87431969-87432403;PctSeqSimilarity=0.9218;PctSizeSimilarity=0.9906;PctRecOverlap=0.6075;SizeDiff=6;StartDistance=-247;EndDistance=-247;GTMatch=1;TruScore=83;MatchId=1506.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:3:15:1:19:./.:1:1:1:0:./.:2:1:0/1:17:17:.:.:.
chr13	87600201	HG2_Ill_GATKHC_22804	T	TTGGGGTACACTGGATATAACACAGCTGATGTTAGCTGATGTCAGTAATAACGACTAATATTTAAAACCTGATTTAGACTGGATTTTGGGGTACAGTGGATATAAGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9915:HG2_PB_pbsv_14282:HG3_PB_HySA_21508:HG3_PB_pbsv_13933:HG2_PB_HySA_26038:HG3_Ill_svaba_17953:HG3_Ill_GATKHC_22682:HG3_Ill_GATKHCSBGrefine_9412:HG2_Ill_svaba_17794:HG2_Ill_GATKHC_22804:HG2_Ill_GATKHCSBGrefine_9522:HG3_Ill_SVrefine2DISCOVARDovetail_10238:HG2_PB_SVrefine2Falcon2Bionano_7104;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9522:HG2_Ill_GATKHC_22804:HG2_Ill_svaba_17794:HG3_Ill_GATKHCSBGrefine_9412:HG3_Ill_GATKHC_22682:HG3_Ill_svaba_17953;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0545455;ClusterMaxEditDist=0.20354;PBcalls=5;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=106;DistBack=22068;DistForward=31399;DistMin=22068;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=101;REFWIDENED=13:87600169-87600269;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1507.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:25:0|1:38:2:1:21:0|1:13:0:0:48:0/1:24:13:./.:.:.:.:.:.
chr13	87696253	HG2_PB_HySA_26040	C	CCCCAATCGAGACCATCCTGGCTAACACGGTGAAACCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAGAACTCTCCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4508:HG3_PB_pbsv_13934:HG3_PB_HySA_21509:HG4_PB_pbsv_14245:HG2_PB_pbsv_14283:HG2_PB_HySA_26040:HG2_PB_HySA_26039:HG4_PB_HySA_20786:HG4_PB_assemblyticsfalcon_7128:HG3_PB_assemblyticsfalcon_7225:HG4_PB_SVrefine2PBcRDovetail_7130:HG2_PB_SVrefine2Falcon1plusDovetail_3117:HG4_PB_SVrefine2Falcon1Dovetail_8672:HG3_PB_SVrefine2Falcon1Dovetail_8627;NumClusterSVs=14;ExactMatchIDs=HG2_PB_HySA_26040;NumExactMatchSVs=1;ClusterMaxShiftDist=0.210938;ClusterMaxSizeDiff=0.210938;ClusterMaxEditDist=0.300781;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=253;DistBack=-4;DistForward=14921;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=13:87696240-87696258;PctSeqSimilarity=0.9816;PctSizeSimilarity=0.9693;PctRecOverlap=0.931;SizeDiff=-8;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=96;MatchId=1508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:28:0|1:31:5:1:18:1|0:1:7:26:0:0/1:27:15:./.:.:.:.:.:.
chr13	87863023	HG3_Ill_SVrefine2DISCOVARDovetail_10242	T	TTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCATCCTTCTCTCTCTTCTTCCTTCCTCCCTCCCTCCCTCTCTTCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCTTCTTCCTTCCTTCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8674:HG4_PB_pbsv_14248:HG3_PB_HySA_21511:HG4_PB_HySA_20790:HG4_Ill_GATKHCSBGrefine_9821:HG2_Ill_GATKHCSBGrefine_9524:HG3_Ill_GATKHCSBGrefine_9413:HG3_Ill_MetaSV_1431:HG2_PB_HySA_26043:HG2_Ill_breakscan11_4509:HG3_PB_pbsv_13937:HG4_PB_SVrefine2PBcRDovetail_7132:HG4_Ill_SVrefine2DISCOVARDovetail_10113:HG2_10X_SVrefine210Xhap12_9917:HG3_PB_SVrefine2Falcon1Dovetail_8629:HG3_PB_SVrefine2PBcRDovetail_6723:HG3_Ill_SVrefine2DISCOVARDovetail_10242:HG2_PB_SVrefine2PBcRplusDovetail_2945:HG2_PB_SVrefine2Falcon2Bionano_7105:HG2_Ill_SVrefine2DISCOVARplusDovetail_3460:HG2_PB_SVrefine2Falcon1plusDovetail_3119:HG2_PB_pbsv_14286;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3460:HG2_PB_SVrefine2Falcon2Bionano_7105:HG2_PB_SVrefine2PBcRplusDovetail_2945:HG3_Ill_SVrefine2DISCOVARDovetail_10242:HG3_PB_SVrefine2PBcRDovetail_6723;NumExactMatchSVs=5;ClusterMaxShiftDist=0.10453;ClusterMaxSizeDiff=0.10453;ClusterMaxEditDist=0.268041;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=147;DistBack=-260;DistForward=-1;DistMin=-260;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=270;REFWIDENED=13:87863024-87863293;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9932;PctRecOverlap=0.8844;SizeDiff=1;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=95;MatchId=1509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:2:23:0:24:./.:1:19:2:20:./.:2:19:./.:.:.:.:.:.
chr13	89110954	HG2_PB_SVrefine2Falcon2Bionano_7107	A	TATATATATAATATTATATATATTTCTGTAGCATCACATCTCACAACTCCCCACCATGCTTTTATAATATGCATTTATTTGTCATTTCCTTTTATACAACGTATTTTTCAGGCCATCTTTCTTTTCCTTATGCTAATCCCTGTTAGGAAAGCCCTTATCTCTGTTCTTCGCCAGCCATACTCATGCTCATTTCTTCCAGAGTGACCCTAGGCACTGTCTCTTCTATGAAATCCTCCCTGAATGAAGAGGTTGAAAGAATTACTGCTGTGGTGTGGGGTGATCTTTGTGTCTTCTTGTT	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_10246:HG2_PB_PB10Xdip_9259:HG2_PB_PB10Xdip_9258:HG3_PB_pbsv_13947:HG2_PB_SVrefine2Falcon1plusDovetail_3122:HG3_Ill_MetaSV_1435:HG4_PB_SVrefine2PBcRDovetail_7135:HG3_PB_assemblyticsfalcon_7241:HG4_PB_assemblyticsfalcon_7148:HG2_PB_assemblyticsPBcR_7003:HG4_PB_SVrefine2Falcon1Dovetail_8680:HG2_PB_SVrefine2PBcRplusDovetail_2948:HG2_PB_SVrefine2PB10Xhap12_10318:HG2_PB_SVrefine2Falcon2Bionano_7107:HG3_PB_SVrefine2Falcon1Dovetail_8634:HG4_Ill_SVrefine2DISCOVARDovetail_10117:HG3_PB_SVrefine2PBcRDovetail_6727;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7107:HG2_PB_SVrefine2PB10Xhap12_10318:HG2_PB_SVrefine2PBcRplusDovetail_2948:HG4_PB_SVrefine2Falcon1Dovetail_8680:HG4_PB_SVrefine2PBcRDovetail_7135;NumExactMatchSVs=5;ClusterMaxShiftDist=0.335443;ClusterMaxSizeDiff=0.335443;ClusterMaxEditDist=0.335443;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=297;DistBack=16;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=13:89110926-89110977;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9966;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1510.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:79:1/1:0:16:0:9:./.:0:3:0:10:1/1:0:18:./.:.:.:.:.:.
chr13	89227028	HG4_Ill_250bpfermikitraw_18821	C	CTTTTTTCTATACACAAATACATTAAGTATTTGTACTTAATGTATTTAAATACATAAGTATACTTATTGTATACACAAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_14296:HG4_Ill_manta_3364:HG4_Ill_Cortex_971:HG2_Ill_manta_3949:HG2_Ill_Cortex_2335:HG2_PB_HySA_26070:HG4_Ill_svaba_17854:HG4_Ill_Krunchall_19746:HG4_Ill_250bpfermikitraw_18821:HG4_Ill_150bpfermikitraw_18123:HG2_Ill_svaba_17816:HG2_Ill_Krunchall_19423:HG2_Ill_250bpfermikitraw_19086:HG2_Ill_150bpfermikitraw_17997:HG4_PB_assemblyticsfalcon_7150:HG3_PB_assemblyticsfalcon_7242:HG4_PB_pbsv_14258;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17997:HG2_Ill_250bpfermikitraw_19086:HG2_Ill_Krunchall_19423:HG2_Ill_svaba_17816:HG4_Ill_150bpfermikitraw_18123:HG4_Ill_250bpfermikitraw_18821:HG4_Ill_Krunchall_19746:HG4_Ill_svaba_17854;NumExactMatchSVs=8;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.287582;PBcalls=5;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=79;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=13:89227027-89227029;PctSeqSimilarity=0.9877;PctSizeSimilarity=1;PctRecOverlap=0.9873;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=1511.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:35:./.:16:21:16:10:1|0:0:51:25:0:0/1:33:24:./.:.:.:.:.:.
chr13	89791406	HG2_10X_SVrefine210Xhap12_9921	ATATATATACACACAC	TTTAAGTCATATGTGTTATATTTCCATTGACAGTTCTGATTTCTAATAGCACCTATGCTCTGAAGTACATAAGAAATATGGTATATGCCTGTAAATACGTATATATGTGTGTGTGTGTGTGTATATATATAT	20	PASS	ClusterIDs=HG4_Ill_150bpfermikitraw_18127:HG4_PB_assemblyticsfalcon_7154:HG4_PB_SVrefine2Falcon1Dovetail_8683:HG4_PB_SVrefine2PBcRDovetail_7137:HG4_Ill_SVrefine2DISCOVARDovetail_10120:HG2_Ill_SVrefine2DISCOVARplusDovetail_3463:HG2_10X_SVrefine210Xhap12_9921:HG3_PB_assemblyticsfalcon_7245:HG3_PB_SVrefine2Falcon1Dovetail_8637:HG3_Ill_Spiral_14858:HG2_Ill_SpiralSDKrefine_4529:HG4_PB_pbsv_14260:HG3_Ill_MetaSV_1437:HG4_Ill_manta_3365:HG3_Ill_manta_3229:HG2_Ill_manta_3951:HG2_PB_pbsv_14298:HG4_Ill_250bpfermikitraw_18825:HG4_Ill_MetaSV_1407;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9921:HG2_Ill_SVrefine2DISCOVARplusDovetail_3463:HG4_Ill_SVrefine2DISCOVARDovetail_10120:HG4_PB_SVrefine2PBcRDovetail_7137;NumExactMatchSVs=4;ClusterMaxShiftDist=0.293103;ClusterMaxSizeDiff=0.293103;ClusterMaxEditDist=0.318584;PBcalls=7;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=116;DistBack=62499;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:89791422-89791405;PctSeqSimilarity=0.9745;PctSizeSimilarity=0.9508;PctRecOverlap=0.8939;SizeDiff=-6;StartDistance=2;EndDistance=17;GTMatch=0;TruScore=93;MatchId=1512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:27:0|1:36:2:1:27:1|0:1:28:29:0:0/1:32:18:./.:.:.:.:.:.
chr13	90321198	HG2_PB_SVrefine2PBcRplusDovetail_2949	G	GCACTTTGGGAGGCCGAGAAGGACGGATCACGAGGTCAGGAGATCGAGACCATCCTGACTAACACGTTGAAACCCCCGTCTCTACTAAAAATACAAAAAATTACCTGGGCATGGTGGCAGGCGCCTGTAGCCCCAGCTACTCAGGAGGCTGAGGGAGGAGAATGGCGTGAACCCAGAGGTGGAGCTTGCAGTTAGCCGAGACCACACCACTGCACTCCAGTCTGGGCCACAGGGCGAGACTCCATCTCACAAAAAAAAAAAAAAAAAAAATTTGCATGGAAAGGACATTTAGATCTAAAGCAACATTTCTGCTAGTCATATTGGATGCTATTTTTTACTTTAATAAACTAAAAATTTATGTTATCCAATAAGCAGATGCTTTATTACTTTCTGAGTAATTAACTACAGAAATAAATGATTTCCAAATTGCAAAAAATAATCTAAATACAATGCCTTGCTTTTTTCTAGAAAATCACAACTTCTCTGCAAATTATTCCTTTAATATAAAGGACTTCAGTGTTCATAGATACAGAACATAAATAATTATTTTAATAATAGTACATTATCTATCTCCTTTTATACTATCATCACTCGATATGGGTAAAGAGTTACATACACTTTTTATCCTTTTAATTTATATTGCTATAAACTATATATTCATGGAAAATAAAGCACTAAGTGATGCTGGTTTTCTTAAACATGGTTTAACTTATTTTCCATGGATGACACATTATTTAAACAGGTGGCATAAATGAATGCTTCCATTTCTAAAAATGAGGACAAGCTCCATACATAATGTATAGTTTTAATATTATTAATGACCAAGTCATTCTTTGGTTTATTTCTATTCTCTATCAATACCATGATGTAGCATTCTAATAAATCATTAGTGGGACACCATTGTAATGTCATCGTACAAAAATGCATCATCAAAACTATTGTGATAAAAGCTGCCCTTGTGATGATGAATAGGTCTGACTCATAAGCACTCATTTAGTACATACCTGCTGTAAAATTAGGAAGGTCTTTGAATAACCAGATAAGCAATATTGCATTGATGATAAAAAATATTGTATGTTTAATTGTTACGCATTTATTTGTGCAAACAAAAGCTGAGTGGAAAGTCCATTAAGGAATTTTGGAGAAAAGCTTCCTATATGGTCTGTTGTTTTCTGAATGAGTTTTGTTCAAAATTTTTCATTTCCAGGATGATTAATAAAATAAGAATACAAAAATATTCACTGAAAATATTCCTAATTCTTTAGAAGTCTACTATATCTAAGAAAATATTTCACTGTTTGATTTTATTTCTTCCAAAATGCTTAAACCAATTAGTAAGTTGCTTGTCAGTGGCAAGGACAGGATTCATGTAGAGTACAATCTAAATCTAAAGCCAATGCTTAAAATTTTTATTACCTAAAGTCACTCATGAGTCGGTACAGACACTTATTTTGTTTTTCTTTTTTGTTTCCCAGTGGAATACTTTATTAGTGCAACATCTGTAAATCTACAGATGTTTTCCATTGTCACCATAAGGTGTAGGATGATCAAGGGATCACAGTTATTATTGAATGAACTATCTCAGCTTACTGGAACCATTTTATAATCAACCACTTGCTTGATGAGCTTCTTAGAATATCTTTGGTAGTCTTGATAGTTAAGTGGGCCTCTTGAGTGGTAAAAAGTGGTGAAAGAGTCTTAGATTATCCTTTCTGCTCTAGCGGTCCTATACCTCTATAGATACCACAGCTGGGTTCAAGGGCAAGAAATTTGGGAAATATATCAGTTTTTGGTTGATGCCAGTCAACTTCACATTGGATCTATTACCTTCATTCTGGAATAGGTGTTTACTTTCTGATTGACTGAATTACTGAATCATTCCTCCCTTCTTTATTTTAAATATCTACTAGACATTTTCTGTATGCCAATAGAAGATATGCTGAAAGTTGAGAATGAGGGAATGAAATGAACTTGGTCCTCTATCTAAGGGTTTCACAATCTATAGGTAAGAGCAGACAAATAAGTTCAGCAACATAAACAATTTTAAAATAAACACATGTTCATTAATAGGAAGATAATTTTTATTTCAATAATTTAAATCCTTAAAGTTTGTAGTAAATAAGTGAACATTTCTTCCTTTATTTAAATATCAGATATTAATTTTACTGTATCAAGCTAAGTATTTTCTTTTAAGAATTATCTAACTATTGAATTTTTGGTAAATTGGCTCTAAATTTCTATAAAGATTTTGAAACAGTATTGTGTTTTCCATTGTCACCGAAGGTGTAGGATGATAAAGGTATCAAGTCAGTAAAAGCTACAATTTTCAGTTAGTAAAAACATATTTGTTGTTGTGTTTAAGATAATCCCTGCTTTTTGTTCCCTAAATAACTAATTCAAATGTTTATAATGCTTTTTTTTTGTTGCTGCAATTATTTGTTTCTCCTTACCTTTAGACTTCCTAGTCTACTCACGCCCTTTTCAGACCCTTTTAACACAGCAGCCAGAAATACTGAAATTCTTGTTAGATTAAATTGTATCAGTGTACCCGGTTGGGCATGGTGGTTCACACTTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGGTCAGAAGTTTGAGACCAGCCTGACCAACATGGTGAAACCCTGTCTGTACTAAAAATACACACACACAAATTGTATTAGTGTACTTAGCTCAAAAATCTTGTACCAGCTTTACATTTGCTCAGGTAAGAGACAAGTACTCTATGGTAGCACGCAAGGCCCACGTGACCTCCTACATCTGCAATCTCATGGCCCATGACACAATACTCTTGCCCTCAACATTCCAGGCACACTCATTCCTTTTCTCTTCTTGATCAGGCAAAGTGAACCTTTGTCTCATGGCCTTTGCCCCTTGCTGTTTCTTGAACCAGAGAGACTATATAAAAGAAACTTTGTAAATGTTTTCCACAAAACCAATAGTAGTCTTCTCAATTTACAGAGCACTAACAATTAATTACATGTTGTGAAACCAGAAGATACTTTTAAAACTACCAGTTAAATACAAAACTAAATTTTGATAAACCACACTATGAGAAAGACTAAAGTATTTTTCTATCTCTCAAGAATATACTGTAAGATTTTATTTCAAATGAGTGAACAAGGAGTAAGTATATGGCTAGAAAACAGAAAAAATTATTATAGCAATGGATCAGAAAGTTACAGGTATGTTATATATTTATATAAAATATATATTTATAAAATTCTAAATATATAGAATGTTAGTTTCTTGGATTTATCTGGTGTGGTATTTCTGAAGCTGAGGGGTTAATCTGATTGGGTTTGTCAAACAAACTGCCCTGTTGCTTTTGGTCCCTTGCTTTTGGCTGTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTCCATAAAGCTGAAGGCCATGCTACTGAACGCCGTAACTTAACCTTCACTGGCTACATTATAGATAACATTTATGAGTCACCATGGTAACAGCTGCTTCAGTTATTTTTCAGGAACTTCAGGCAGCTCCTGTCCTGTTCAAACCAGTTGCAAATACAGACCCTTCAACAGAGGCTGAGCACAGTCCTACTAGGTGGCTTTTTGACATGAGAAGGCCCAAAACACCACCCTCAGATCAAGCTACTGCCTCCGTTTTCTGAACATATGCCCTAGAAAAAGCCATGAGCCCTGACTACACTTGTGTAGATCACTGATTACTTCATTTTCTTGTCCCTAACCCTTATCTTCTGGGAGGCAAATTTGAGAGCTCTTTTCCTGCCTCCTCGCTAGGCTCCCTAGTGAATAAATCTTTTCTCTTTTGCAAAATGTGTTGTCACAGTGATTGACTTACTGTGGGCGTGGGCAAAACAAACCTGAATGAACTGATCAGTATCATTTCCAGCTTATTTAAATTTATAATTGGTAGTGATTTTTTTTCCTCTATCCAAATAAATGTTTACTTTCATAACAAATTTTGGATTATTTCTTAAAGAGAGCTCCTGTAATTA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9263:HG2_PB_pbsv_14303:HG3_PB_pbsv_13957:HG3_PB_HySA_21542:HG3_PB_SVrefine2Falcon1Dovetail_8639:HG4_Ill_SVrefine2DISCOVARDovetail_10122:HG2_PB_SVrefine2Falcon2Bionano_7108:HG3_Ill_SVrefine2DISCOVARDovetail_10254:HG4_PB_SVrefine2PBcRDovetail_7138:HG2_PB_SVrefine2Falcon1plusDovetail_3125:HG2_Ill_SVrefine2DISCOVARplusDovetail_3467:HG3_PB_SVrefine2PBcRDovetail_6730:HG2_10X_SVrefine210Xhap12_9925:HG2_PB_SVrefine2PBcRplusDovetail_2949:HG2_PB_SVrefine2PB10Xhap12_10321:HG4_PB_SVrefine2Falcon1Dovetail_8686;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_2949;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0615496;ClusterMaxSizeDiff=0.0608255;ClusterMaxEditDist=0.189618;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=4022;DistBack=3010;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=13:90321199-90321200;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=1513.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:99:1/1:0:33:0:34:1/1:0:6:0:10:1/1:0:33:1/1:1:345:.:3958:.
chr13	90365273	HG2_Ill_MetaSV_1323	A	AGTGGGTGTCTATAGATGCGAGGCTATAAATTTGGTTTACAAAAATTCATTTCCCAGAAGTTTACTCCGAATTAGCAAAGGCATTGGTTGATTGAGATGTTACTCTGTTAGATTACAGGTGGGTGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2950:HG2_PB_pbsv_14304:HG3_PB_pbsv_13958:HG2_Ill_breakscan11_4511:HG2_PB_assemblyticsPBcR_7017:HG3_PB_SVrefine2Falcon1Dovetail_8640:HG3_PB_assemblyticsfalcon_7254:HG3_PB_SVrefine2PBcRDovetail_6731:HG3_Ill_svaba_17978:HG3_Ill_manta_3232:HG3_Ill_Spiral_14864:HG3_Ill_SVrefine2DISCOVARDovetail_10256:HG3_Ill_MetaSV_1440:HG3_Ill_GATKHCSBGrefine_9434:HG3_Ill_Cortex_1014:HG2_Ill_svaba_17826:HG2_Ill_manta_3953:HG2_Ill_SpiralSDKrefine_4535:HG2_Ill_SVrefine2DISCOVARplusDovetail_3469:HG2_Ill_MetaSV_1323:HG2_Ill_GATKHCSBGrefine_9541:HG2_Ill_Cortex_2342:HG2_10X_SVrefine210Xhap12_9926:HG2_PB_SVrefine2Falcon2Bionano_7109;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9926:HG2_Ill_Cortex_2342:HG2_Ill_GATKHCSBGrefine_9541:HG2_Ill_MetaSV_1323:HG2_Ill_SVrefine2DISCOVARplusDovetail_3469:HG2_Ill_SpiralSDKrefine_4535:HG2_Ill_manta_3953:HG2_Ill_svaba_17826:HG3_Ill_Cortex_1014:HG3_Ill_GATKHCSBGrefine_9434:HG3_Ill_MetaSV_1440:HG3_Ill_SVrefine2DISCOVARDovetail_10256:HG3_Ill_Spiral_14864:HG3_Ill_manta_3232:HG3_Ill_svaba_17978:HG3_PB_SVrefine2PBcRDovetail_6731;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0979592;ClusterMaxSizeDiff=0.0897959;ClusterMaxEditDist=0.180392;PBcalls=8;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=125;DistBack=21250;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=13:90365274-90365275;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1514.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:30:0|1:14:1:1:36:0|1:25:0:0:39:0/1:28:12:./.:.:.:.:.:.
chr13	90401830	HG3_PB_SVrefine2Falcon1Dovetail_8641	T	TAGAAATGAGTTTTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_21543:HG2_PB_pbsv_14305:HG3_PB_pbsv_13959:HG4_PB_assemblyticsfalcon_7163:HG3_PB_assemblyticsfalcon_7255:HG2_PB_SVrefine2Falcon1plusDovetail_3126:HG3_PB_SVrefine2PBcRDovetail_6732:HG3_PB_SVrefine2Falcon1Dovetail_8641:HG3_Ill_MetaSV_1441:HG2_PB_SVrefine2Falcon2Bionano_7110:HG2_Ill_MetaSV_1324:HG2_Ill_breakscan11_4512;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7110:HG3_Ill_MetaSV_1441:HG3_PB_SVrefine2Falcon1Dovetail_8641:HG3_PB_SVrefine2PBcRDovetail_6732;NumExactMatchSVs=4;ClusterMaxShiftDist=0.147813;ClusterMaxSizeDiff=0.147813;ClusterMaxEditDist=0.217195;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=330;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:90401831-90401846;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1515.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:0|1:26:0:0:34:0|1:15:0:0:5:0/1:24:7:0/1:8:31:.:.:.
chr13	90903261	HG2_Ill_MetaSV_1326	A	ACTCTTTAATAATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_26086:HG2_PB_pbsv_14308:HG2_Ill_breakscan11_4513:HG4_PB_pbsv_14268:HG4_PB_HySA_20823:HG4_Ill_GATKHCSBGrefine_9838:HG2_Ill_MetaSV_1326:HG2_Ill_GATKHCSBGrefine_9544:HG2_10X_SVrefine210Xhap12_9928:HG4_Ill_MetaSV_1410:HG2_PB_SVrefine2Falcon1plusDovetail_3127;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9928:HG2_Ill_GATKHCSBGrefine_9544:HG2_Ill_MetaSV_1326:HG4_Ill_GATKHCSBGrefine_9838;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0507937;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.21978;PBcalls=5;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=309;DistBack=-4;DistForward=0;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:90903262-90903276;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:38:./.:10:24:27:6:1|0:0:13:18:0:0/1:25:19:./.:4:45:.:.:.
chr13	90943356	HG2_Ill_GATKHC_22851	C	CCTTGAGCCAAATGTCTCCCAATAGCACTCCTTAGCATTAGGACAGCCCCAAGAAAAGA	20	PASS	ClusterIDs=HG2_PB_HySA_26087:HG4_PB_pbsv_14269:HG2_PB_PB10Xdip_9268:HG3_PB_pbsv_13965:HG2_PB_pbsv_14309:HG4_PB_assemblyticsfalcon_7173:HG4_Ill_svaba_17867:HG4_Ill_manta_3367:HG4_Ill_Krunchall_19762:HG4_Ill_GATKHC_22813:HG4_Ill_GATKHCSBGrefine_9839:HG4_Ill_250bpfermikitraw_18837:HG4_Ill_150bpfermikitraw_18140:HG3_PB_assemblyticsfalcon_7264:HG3_Ill_svaba_17985:HG3_Ill_manta_3235:HG3_Ill_Spiral_14872:HG3_Ill_Krunchall_19055:HG3_Ill_GATKHC_22734:HG3_Ill_GATKHCSBGrefine_9439:HG3_Ill_250bpfermikitraw_18548:HG3_Ill_150bpfermikitraw_18050:HG2_PB_assemblyticsPBcR_7027:HG2_Ill_svaba_17833:HG2_Ill_manta_3955:HG2_Ill_SpiralSDKrefine_4540:HG2_Ill_Krunchall_19442:HG2_Ill_GATKHC_22851:HG2_Ill_GATKHCSBGrefine_9545:HG2_Ill_250bpfermikitraw_19103:HG2_Ill_150bpfermikitraw_18015;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18015:HG2_Ill_250bpfermikitraw_19103:HG2_Ill_GATKHCSBGrefine_9545:HG2_Ill_GATKHC_22851:HG2_Ill_Krunchall_19442:HG2_Ill_SpiralSDKrefine_4540:HG2_Ill_manta_3955:HG2_Ill_svaba_17833:HG2_PB_assemblyticsPBcR_7027:HG3_Ill_150bpfermikitraw_18050:HG3_Ill_250bpfermikitraw_18548:HG3_Ill_GATKHCSBGrefine_9439:HG3_Ill_GATKHC_22734:HG3_Ill_Krunchall_19055:HG3_Ill_Spiral_14872:HG3_Ill_manta_3235:HG3_Ill_svaba_17985:HG3_PB_assemblyticsfalcon_7264:HG4_Ill_150bpfermikitraw_18140:HG4_Ill_250bpfermikitraw_18837:HG4_Ill_GATKHCSBGrefine_9839:HG4_Ill_GATKHC_22813:HG4_Ill_Krunchall_19762:HG4_Ill_manta_3367:HG4_Ill_svaba_17867:HG4_PB_assemblyticsfalcon_7173;NumExactMatchSVs=26;ClusterMaxShiftDist=0.130081;ClusterMaxSizeDiff=0.113821;ClusterMaxEditDist=0.220472;PBcalls=8;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=6048;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=13:90943357-90943360;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:./.:0:2:0:2:1/1:0:7:0:16:1/1:0:49:./.:.:.:.:.:.
chr13	91597382	HG2_PB_SVrefine2PB10Xhap12_10326	A	AGATATACATATATGTATATCTATTAGATATACATATATGTATATCTATTAGATATACATATATGTGTATATATATTATATATACACATATATGTATATATTAT	20	PASS	ClusterIDs=HG4_PB_HySA_20831:HG4_PB_assemblyticsfalcon_7179:HG2_PB_assemblyticsPBcR_7032:HG3_PB_assemblyticsfalcon_7270:HG4_PB_SVrefine2Falcon1Dovetail_8694:HG4_Ill_SVrefine2DISCOVARDovetail_10130:HG3_PB_SVrefine2PBcRDovetail_6736:HG3_Ill_SVrefine2DISCOVARDovetail_10265:HG2_PB_SVrefine2PBcRplusDovetail_2954:HG2_PB_SVrefine2PB10Xhap12_10326:HG2_PB_SVrefine2Falcon2Bionano_7113:HG2_PB_SVrefine2Falcon1plusDovetail_3129:HG2_Ill_SVrefine2DISCOVARplusDovetail_3474:HG3_PB_SVrefine2Falcon1Dovetail_8647:HG2_PB_HySA_26091:HG3_PB_HySA_21557:HG4_Ill_GATKHC_22820:HG3_Ill_GATKHC_22738:HG2_Ill_GATKHC_22855:HG3_Ill_manta_3237:HG2_PB_PB10Xdip_9270:HG2_PB_PB10Xdip_9269:HG4_Ill_Krunchall_19769:HG4_Ill_250bpfermikitraw_18842:HG4_Ill_150bpfermikitraw_18147:HG3_Ill_250bpfermikitraw_18552:HG3_Ill_150bpfermikitraw_18054:HG2_Ill_150bpfermikitraw_18020:HG3_PB_HySA_21556:HG3_PB_pbsv_13968:HG4_PB_pbsv_14273;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3474:HG2_PB_SVrefine2Falcon1plusDovetail_3129:HG2_PB_SVrefine2Falcon2Bionano_7113:HG2_PB_SVrefine2PB10Xhap12_10326:HG2_PB_SVrefine2PBcRplusDovetail_2954:HG3_Ill_SVrefine2DISCOVARDovetail_10265:HG3_PB_SVrefine2PBcRDovetail_6736:HG4_Ill_SVrefine2DISCOVARDovetail_10130;NumExactMatchSVs=8;ClusterMaxShiftDist=0.134021;ClusterMaxSizeDiff=0.111675;ClusterMaxEditDist=0.263415;PBcalls=18;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=103;DistBack=39;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=262;REFWIDENED=13:91597131-91597392;PctSeqSimilarity=0.9607;PctSizeSimilarity=0.9903;PctRecOverlap=0.3981;SizeDiff=1;StartDistance=62;EndDistance=62;GTMatch=0;TruScore=78;MatchId=1518.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:52:1/1:5:30:1:13:./.:2:17:0:3:1/1:0:65:./.:.:.:.:.:.
chr13	91626222	HG2_PB_SVrefine2Falcon2Bionano_7114	T	TAAGAAAATACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9271:HG2_PB_pbsv_14312:HG2_10X_SVrefine210Xhap12_9931:HG3_PB_pbsv_13969:HG4_PB_assemblyticsfalcon_7180:HG4_PB_pbsv_14274:HG2_PB_assemblyticsPBcR_7033:HG3_PB_assemblyticsfalcon_7271:HG2_PB_HySA_26092:HG2_Ill_breakscan11_4514:HG3_PB_HySA_21558:HG4_PB_SVrefine2Falcon1Dovetail_8695:HG3_PB_SVrefine2PBcRDovetail_6737:HG2_PB_SVrefine2PBcRplusDovetail_2955:HG2_PB_SVrefine2PB10Xhap12_10327:HG2_PB_SVrefine2Falcon2Bionano_7114:HG4_PB_SVrefine2PBcRDovetail_7142:HG3_PB_SVrefine2Falcon1Dovetail_8648:HG2_PB_SVrefine2Falcon1plusDovetail_3130:HG4_PB_HySA_20832:HG2_PB_PB10Xdip_9272;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7114:HG2_PB_SVrefine2PB10Xhap12_10327:HG2_PB_SVrefine2PBcRplusDovetail_2955;NumExactMatchSVs=3;ClusterMaxShiftDist=0.061663;ClusterMaxSizeDiff=0.061663;ClusterMaxEditDist=0.237319;PBcalls=19;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=1574;DistBack=28832;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=13:91626223-91626231;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1519.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:./.:0:0:0:0:./.:0:5:0:0:1/1:0:22:1/1:16:414:.:1580:.
chr13	92161658	HG2_PB_SVrefine2PBcRplusDovetail_2956	T	TAACATATTCATATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9273:HG2_PB_pbsv_14313:HG3_PB_pbsv_13972:HG3_PB_SVrefine2Falcon1Dovetail_8650:HG4_PB_pbsv_14275:HG2_PB_HySA_26094:HG2_PB_assemblyticsPBcR_7035:HG4_PB_assemblyticsfalcon_7184:HG3_PB_assemblyticsfalcon_7276:HG4_PB_HySA_20833:HG3_PB_HySA_21565:HG3_PB_SVrefine2PBcRDovetail_6739:HG4_PB_SVrefine2Falcon1Dovetail_8697:HG2_PB_SVrefine2Falcon2Bionano_7115:HG4_Ill_manta_3369:HG4_Ill_MetaSV_1412:HG4_Ill_GATKHCSBGrefine_9843:HG3_Ill_MetaSV_1448:HG3_Ill_GATKHCSBGrefine_9442:HG2_PB_SVrefine2PBcRplusDovetail_2956:HG2_PB_SVrefine2PB10Xhap12_10328:HG2_Ill_MetaSV_1328:HG2_Ill_GATKHCSBGrefine_9547:HG2_10X_SVrefine210Xhap12_9933:HG2_PB_SVrefine2Falcon1plusDovetail_3131:HG4_PB_SVrefine2PBcRDovetail_7143:HG2_PB_PB10Xdip_9274;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9933:HG2_Ill_GATKHCSBGrefine_9547:HG2_Ill_MetaSV_1328:HG2_PB_SVrefine2PB10Xhap12_10328:HG2_PB_SVrefine2PBcRplusDovetail_2956:HG3_Ill_GATKHCSBGrefine_9442:HG3_Ill_MetaSV_1448:HG4_Ill_GATKHCSBGrefine_9843:HG4_Ill_MetaSV_1412:HG4_Ill_manta_3369;NumExactMatchSVs=10;ClusterMaxShiftDist=0.170015;ClusterMaxSizeDiff=0.170015;ClusterMaxEditDist=0.249221;PBcalls=19;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=325;DistBack=30500;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:92161659-92161674;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1520.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:0:10:0:14:./.:0:10:0:4:1/1:0:33:1/1:2:77:.:.:.
chr13	92261273	HG3_PB_SVrefine2PBcRDovetail_6740	A	AAATTTAGATTTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4515:HG2_PB_pbsv_14314:HG2_PB_SVrefine2Falcon2Bionano_7116:HG4_PB_pbsv_14276:HG4_PB_SVrefine2PBcRDovetail_7144:HG3_PB_SVrefine2PBcRDovetail_6740:HG4_PB_HySA_20834:HG3_PB_assemblyticsfalcon_7277:HG4_PB_assemblyticsfalcon_7185:HG2_PB_assemblyticsPBcR_7037:HG2_PB_HySA_26095:HG3_PB_pbsv_13973:HG3_PB_SVrefine2Falcon1Dovetail_8651:HG4_PB_SVrefine2Falcon1Dovetail_8698:HG4_Ill_MetaSV_1413:HG2_PB_SVrefine2PB10Xhap12_10329:HG2_PB_SVrefine2PBcRplusDovetail_2957:HG2_PB_SVrefine2Falcon1plusDovetail_3132:HG2_PB_PB10Xdip_9276:HG2_PB_PB10Xdip_9275;NumClusterSVs=20;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_6740;NumExactMatchSVs=1;ClusterMaxShiftDist=0.131298;ClusterMaxSizeDiff=0.131298;ClusterMaxEditDist=0.257778;PBcalls=18;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=336;DistBack=-13;DistForward=17974;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=13:92261274-92261286;PctSeqSimilarity=0.9971;PctSizeSimilarity=1;PctRecOverlap=0.9941;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1521.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:1:20:0:18:./.:0:11:0:1:1/1:0:15:1/1:3:77:.:.:.
chr13	92513962	HG4_PB_SVrefine2PBcRDovetail_7146	T	TAAATAAAACATGTTGCTATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGACGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8653:HG2_PB_pbsv_14316:HG3_PB_pbsv_13975:HG3_PB_HySA_21573:HG4_PB_pbsv_14278:HG4_PB_HySA_20837:HG2_Ill_breakscan11_4516:HG2_PB_HySA_26099:HG2_PB_SVrefine2Falcon1plusDovetail_3134:HG3_PB_assemblyticsfalcon_7280:HG4_PB_assemblyticsfalcon_7188:HG4_PB_SVrefine2PBcRDovetail_7146:HG4_PB_SVrefine2Falcon1Dovetail_8700;NumClusterSVs=13;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_7146;NumExactMatchSVs=1;ClusterMaxShiftDist=0.208547;ClusterMaxSizeDiff=0.204778;ClusterMaxEditDist=0.252991;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=302;DistBack=30895;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=13:92513963-92513980;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9967;PctRecOverlap=0.9868;SizeDiff=-1;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=1522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:0|1:35:0:2:30:1|0:0:5:20:0:0/1:34:12:0/1:9:35:.:.:.
chr13	92825230	HG3_PB_pbsv_13977	A	AAAAAACGTTTGCGGCCGGCTGCCGGTGGCTCACGCCCCTGTTAATCCCAGCACTTTGGGAGGCCGAGGCCAGGCCGGATCACGAGGTCAGGAATTCGGACCATCCCGCTAAACGGTTGGAAAAACCCGGTTCTACTAAAAATCAAAAAAATTAGCCGGGCGTAGTGGCGGGGCTGCCTGTAGTCCAGCCCCCTACTTGGAGGCTAGAGGAAGGAGAAATGGCGTGACCGAGGCGTGAGCTTGCAGTGAGCCGAGATTCCCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACCTTCCGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG3_PB_HySA_21579:HG3_PB_pbsv_13977:HG4_PB_assemblyticsfalcon_7192:HG2_Ill_breakscan11_4517:HG2_PB_pbsv_14318:HG4_PB_SVrefine2Falcon1Dovetail_8701:HG2_PB_SVrefine2Falcon2Bionano_7118:HG4_PB_pbsv_14280;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_13977;NumExactMatchSVs=1;ClusterMaxShiftDist=0.127527;ClusterMaxSizeDiff=0.127527;ClusterMaxEditDist=0.248889;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=341;DistBack=-8;DistForward=7;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=13:92825231-92825232;PctSeqSimilarity=0.932;PctSizeSimilarity=0.9531;PctRecOverlap=0.9531;SizeDiff=16;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=94;MatchId=1523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:19:0|1:23:7:3:12:./.:1:4:22:0:0/1:37:6:0/1:15:16:.:.:.
chr13	92892086	HG3_Ill_250bpfermikitraw_18565	T	TGCATTTTACATTATCACCATTTTAGCTATATTATATTTAATAGATCACCTAAGATAA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3483:HG3_PB_pbsv_13978:HG3_PB_HySA_21580:HG4_PB_pbsv_14281:HG2_PB_HySA_26103:HG2_PB_pbsv_14319:HG4_Ill_svaba_17877:HG4_Ill_scalpel_13211:HG4_Ill_Krunchall_19778:HG4_Ill_GATKHC_22825:HG4_Ill_GATKHCSBGrefine_9845:HG4_Ill_250bpfermikitraw_18851:HG3_Ill_svaba_17998:HG3_Ill_Krunchall_19074:HG3_Ill_GATKHC_22754:HG3_Ill_GATKHCSBGrefine_9444:HG3_Ill_250bpfermikitraw_18565:HG2_Ill_svaba_17842:HG2_Ill_manta_3958:HG2_Ill_Krunchall_19457:HG2_Ill_GATKHC_22861:HG2_Ill_GATKHCSBGrefine_9549:HG2_Ill_250bpfermikitraw_19116:HG2_Ill_150bpfermikitraw_18028:HG3_PB_SVrefine2PBcRDovetail_6745:HG3_PB_SVrefine2Falcon1Dovetail_8654:HG3_Ill_SVrefine2DISCOVARDovetail_10272:HG2_PB_SVrefine2Falcon1plusDovetail_3136;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18028:HG2_Ill_250bpfermikitraw_19116:HG2_Ill_GATKHCSBGrefine_9549:HG2_Ill_GATKHC_22861:HG2_Ill_Krunchall_19457:HG2_Ill_manta_3958:HG2_Ill_svaba_17842:HG3_Ill_250bpfermikitraw_18565:HG3_Ill_GATKHCSBGrefine_9444:HG3_Ill_GATKHC_22754:HG3_Ill_Krunchall_19074:HG3_Ill_svaba_17998:HG4_Ill_250bpfermikitraw_18851:HG4_Ill_GATKHCSBGrefine_9845:HG4_Ill_GATKHC_22825:HG4_Ill_Krunchall_19778:HG4_Ill_scalpel_13211:HG4_Ill_svaba_17877;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.266667;PBcalls=8;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=-64;DistForward=6464;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=68;REFWIDENED=13:92892083-92892150;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1524.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:0|1:35:2:2:30:./.:14:0:3:23:0/1:14:27:./.:.:.:.:.:.
chr13	93375606	HG2_Ill_manta_3959	A	AAAATGCAGTTCCTGATTTTCTTTTCCTAATAGAAAAATCAATAAATTAATCATAG	20	PASS	ClusterIDs=HG4_PB_pbsv_14287:HG4_Ill_svaba_17884:HG4_PB_assemblyticsfalcon_7198:HG2_Ill_breakscan11_4518:HG4_Ill_scalpel_13215:HG4_Ill_manta_3372:HG4_Ill_Krunchall_19784:HG4_Ill_GATKHC_22834:HG4_Ill_GATKHCSBGrefine_9848:HG4_Ill_250bpfermikitraw_18857:HG4_Ill_150bpfermikitraw_18160:HG2_Ill_svaba_17846:HG2_Ill_manta_3959:HG2_Ill_SpiralSDKrefine_4554:HG2_Ill_Krunchall_19463:HG2_Ill_GATKHC_22869:HG2_Ill_GATKHCSBGrefine_9551:HG2_Ill_250bpfermikitraw_19120:HG2_Ill_150bpfermikitraw_18034:HG2_PB_HySA_26109:HG2_PB_pbsv_14323;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18034:HG2_Ill_250bpfermikitraw_19120:HG2_Ill_GATKHCSBGrefine_9551:HG2_Ill_GATKHC_22869:HG2_Ill_Krunchall_19463:HG2_Ill_SpiralSDKrefine_4554:HG2_Ill_manta_3959:HG2_Ill_svaba_17846:HG4_Ill_150bpfermikitraw_18160:HG4_Ill_250bpfermikitraw_18857:HG4_Ill_GATKHCSBGrefine_9848:HG4_Ill_GATKHC_22834:HG4_Ill_Krunchall_19784:HG4_Ill_manta_3372:HG4_Ill_scalpel_13215:HG4_Ill_svaba_17884;NumExactMatchSVs=16;ClusterMaxShiftDist=0.12963;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.259259;PBcalls=4;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=14495;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=13:93375605-93375607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:33:0|1:35:3:1:29:1|0:0:16:13:0:0/1:23:31:./.:.:.:.:.:.
chr13	93629628	HG2_Ill_Cortex_2353	TAAT	AATTTTCTCTCACTGTTCTTGATTTTGCATAGTTTTTATTGCTATGATTTAAGTTTATTGATTTTCTTATGGTTTCTAATCTCATACTACCATCAGGGAATAATTTATTTCAGATTTTTTTTTTGAAGTTTGGTTTTGTTCTTTTTTACATCTTACATTTCTCACCTCTCTGTCTTCATATTTTCTTTATGTAGATGGACATATTTATAATAACATATTTGCAATCCCATCACTTCTGTAACTTCTGAATCTGATTCTAGTAACTAATTGTTCTCTGTATTTTATGTTA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1331:HG4_PB_HySA_20848:HG4_PB_pbsv_14290:HG2_PB_pbsv_14326:HG4_Ill_Spiral_1111:HG2_Ill_Spiral_952:HG4_PB_SVrefine2PBcRDovetail_7150:HG4_Ill_Cortex_974:HG2_Ill_SVrefine2DISCOVARplusDovetail_3490:HG2_Ill_Cortex_2353:HG2_10X_SVrefine210Xhap12_9942:HG2_PB_SVrefine2Falcon1plusDovetail_3140:HG4_Ill_MetaSV_1417;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9942:HG2_Ill_Cortex_2353:HG2_Ill_SVrefine2DISCOVARplusDovetail_3490:HG4_Ill_Cortex_974;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0783646;ClusterMaxSizeDiff=0.0749574;ClusterMaxEditDist=0.134003;PBcalls=5;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=285;DistBack=0;DistForward=8009;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:93629632-93629627;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.9965;PctRecOverlap=0.9931;SizeDiff=-1;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:26:0|1:43:6:1:19:1|0:0:23:34:0:0/1:27:14:./.:.:.:.:.:.
chr13	93828406	HG2_PB_SVrefine2Falcon2Bionano_7121	T	TGCAGAAAAGGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9287:HG3_PB_pbsv_13982:HG2_PB_pbsv_14328:HG4_PB_pbsv_14292:HG4_PB_assemblyticsfalcon_7202:HG2_PB_assemblyticsPBcR_7055:HG2_PB_HySA_26115:HG3_PB_HySA_21587:HG2_PB_HySA_26114:HG2_PB_SVrefine2Falcon1plusDovetail_3141:HG2_10X_SVrefine210Xhap12_9944:HG4_Ill_MetaSV_1418:HG3_PB_SVrefine2PBcRDovetail_6748:HG3_Ill_GATKHCSBGrefine_9446:HG2_PB_SVrefine2Falcon2Bionano_7121:HG2_Ill_MetaSV_1332:HG4_PB_SVrefine2Falcon1Dovetail_8705:HG2_Ill_manta_3961:HG2_PB_SVrefine2PBcRplusDovetail_2961:HG2_PB_SVrefine2PB10Xhap12_10333:HG4_PB_SVrefine2PBcRDovetail_7151:HG3_PB_SVrefine2Falcon1Dovetail_8658:HG3_Ill_MetaSV_1451:HG2_Ill_breakscan11_4519:HG2_PB_PB10Xdip_9288;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_MetaSV_1332:HG2_PB_SVrefine2Falcon2Bionano_7121:HG3_Ill_GATKHCSBGrefine_9446:HG3_PB_SVrefine2PBcRDovetail_6748:HG4_Ill_MetaSV_1418;NumExactMatchSVs=5;ClusterMaxShiftDist=0.145455;ClusterMaxSizeDiff=0.145455;ClusterMaxEditDist=0.204959;PBcalls=18;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=303;DistBack=13891;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:93828407-93828421;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1527.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:1:22:1:14:./.:0:13:0:3:1/1:0:19:1/1:2:64:.:.:.
chr13	94169000	HG2_Ill_breakscan11_4520	T	TAAGACATATATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_20854:HG4_PB_assemblyticsfalcon_7206:HG2_PB_pbsv_14332:HG4_PB_pbsv_14296:HG2_PB_HySA_26120:HG2_Ill_breakscan11_4520:HG4_PB_SVrefine2Falcon1Dovetail_8709:HG3_PB_SVrefine2Falcon1Dovetail_8663:HG2_PB_SVrefine2Falcon1plusDovetail_3144;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_breakscan11_4520;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0879765;ClusterMaxSizeDiff=0.0821114;ClusterMaxEditDist=0.18;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=337;DistBack=5294;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=13:94169001-94169013;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9854;PctRecOverlap=0.9825;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:24:./.:9:3:9:5:./.:1:4:31:0:0/0:37:1:0/1:15:37:.:.:.
chr13	95249503	HG2_Ill_MetaSV_1336	C	CGCTGATGTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9953:HG2_PB_HySA_26133:HG4_PB_assemblyticsfalcon_7213:HG4_PB_pbsv_14301:HG3_PB_pbsv_13992:HG2_PB_pbsv_14338:HG3_PB_HySA_21600:HG2_PB_assemblyticsPBcR_7065:HG2_Ill_breakscan11_4521:HG2_PB_HySA_26132:HG2_PB_PB10Xdip_9297:HG2_PB_PB10Xdip_9296:HG2_PB_SVrefine2PB10Xhap12_10339:HG4_PB_SVrefine2Falcon1Dovetail_8712:HG4_Ill_GATKHCSBGrefine_9858:HG2_PB_SVrefine2PBcRplusDovetail_2965:HG2_PB_SVrefine2Falcon2Bionano_7125:HG2_PB_SVrefine2Falcon1plusDovetail_3147:HG2_Ill_SVrefine2DISCOVARplusDovetail_3497:HG2_Ill_MetaSV_1336:HG2_Ill_GATKHCSBGrefine_9562;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9562:HG2_Ill_MetaSV_1336:HG2_Ill_SVrefine2DISCOVARplusDovetail_3497:HG2_PB_SVrefine2Falcon1plusDovetail_3147:HG2_PB_SVrefine2Falcon2Bionano_7125:HG2_PB_SVrefine2PBcRplusDovetail_2965:HG4_Ill_GATKHCSBGrefine_9858:HG4_PB_SVrefine2Falcon1Dovetail_8712;NumExactMatchSVs=8;ClusterMaxShiftDist=0.191781;ClusterMaxSizeDiff=0.191781;ClusterMaxEditDist=0.245614;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=146;DistBack=30798;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=13:95249504-95249514;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1529.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:3:23:1:14:1/1:0:17:0:16:1/1:0:14:./.:.:.:.:.:.
chr13	95339433	HG2_Ill_GATKHCSBGrefine_9563	T	TATATATATATACATGTATATATGTATATACATATATATATACATGTATATATGTATATACATATATATATACATGTATATATGTATATAC	20	PASS	ClusterIDs=HG2_PB_HySA_26135:HG4_PB_HySA_20862:HG2_PB_pbsv_14339:HG3_PB_pbsv_13995:HG4_Ill_Krunchall_19810:HG4_PB_pbsv_14302:HG4_Ill_GATKHC_22854:HG4_Ill_250bpfermikitraw_18880:HG4_Ill_150bpfermikitraw_18179:HG3_Ill_Krunchall_19096:HG3_Ill_GATKHC_22781:HG3_Ill_GATKHCSBGrefine_9459:HG3_Ill_250bpfermikitraw_18588:HG2_Ill_GATKHC_22886:HG2_Ill_GATKHCSBGrefine_9563:HG2_Ill_250bpfermikitraw_19141:HG2_Ill_150bpfermikitraw_18053:HG2_Ill_breakscan11_4522:HG2_PB_PB10Xdip_9299:HG2_PB_PB10Xdip_9298;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18053:HG2_Ill_250bpfermikitraw_19141:HG2_Ill_GATKHCSBGrefine_9563:HG2_Ill_GATKHC_22886:HG3_Ill_250bpfermikitraw_18588:HG3_Ill_GATKHCSBGrefine_9459:HG3_Ill_GATKHC_22781:HG3_Ill_Krunchall_19096:HG4_Ill_150bpfermikitraw_18179:HG4_Ill_250bpfermikitraw_18880:HG4_Ill_GATKHC_22854:HG4_Ill_Krunchall_19810;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0851064;ClusterMaxSizeDiff=0.0851064;ClusterMaxEditDist=0.215054;PBcalls=7;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=90;DistBack=-1;DistForward=4762;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=164;REFWIDENED=13:95339310-95339473;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:./.:4:24:0:4:./.:3:18:0:5:1/1:1:46:./.:.:.:.:.:.
chr13	95779017	HG3_Ill_SVrefine2DISCOVARDovetail_10287	A	ATATATATATTTAAGTACACCAAATATATATATTTATATATATTTAAGTACACCATATATATTTATATATATTTAAGTACACCAAATATATATATTTATATATATTTAAGTACACAAAATATATATATTTATATATATTTAAGTACACCAAATATATATATTTATATATATTTAAGTACACCAAATATATATATT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3150:HG2_PB_HySA_26144:HG2_PB_pbsv_14341:HG2_PB_PB10Xdip_9309:HG2_PB_PB10Xdip_9308:HG3_PB_pbsv_13999:HG4_PB_pbsv_14304:HG4_PB_SVrefine2Falcon1Dovetail_8715:HG3_PB_SVrefine2Falcon1Dovetail_8668:HG3_Ill_SVrefine2DISCOVARDovetail_10287:HG2_PB_SVrefine2PBcRplusDovetail_2967:HG2_PB_SVrefine2PB10Xhap12_10341:HG2_PB_SVrefine2Falcon2Bionano_7127:HG2_Ill_SVrefine2DISCOVARplusDovetail_3498;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3498:HG2_PB_SVrefine2Falcon2Bionano_7127:HG2_PB_SVrefine2PB10Xhap12_10341:HG2_PB_SVrefine2PBcRplusDovetail_2967:HG3_Ill_SVrefine2DISCOVARDovetail_10287:HG3_PB_SVrefine2Falcon1Dovetail_8668;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0913706;ClusterMaxSizeDiff=0.0913706;ClusterMaxEditDist=0.181373;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=194;DistBack=-143;DistForward=-1;DistMin=-143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=127;REFWIDENED=13:95779018-95779144;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9798;PctRecOverlap=0.7236;SizeDiff=-4;StartDistance=-53;EndDistance=-53;GTMatch=0;TruScore=89;MatchId=1531.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:14:2:19:1/1:0:12:0:7:1/1:0:26:./.:.:.:.:.:.
chr13	98715897	HG2_PB_PB10Xdip_9321	C	CCCTCCCTTTCCCTCCCCTCCGCCCCTCCCCTTCCCTCCCTCCCCTCCCATCCCCTCCCTTTCCCTCCCCTCCCCTCCCTCCCTCCCTTTCCCTCCCCTCCCTTTCCCTCCCCTTCCCTTCCCTCCCCTCCCCTTCCCTCCCCTCCCTCTCTCCCTAGTCTATAATCTCCCCTTCCCTCCCCTCCCCTCTCCTCCCCTCCCCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2972:HG2_PB_pbsv_14348:HG2_PB_PB10Xdip_9321:HG3_PB_SVrefine2Falcon1Dovetail_8674:HG3_PB_pbsv_14007:HG3_PB_HySA_21624:HG4_PB_SVrefine2Falcon1Dovetail_8721:HG2_PB_PB10Xdip_9320:HG2_PB_SVrefine2PB10Xhap12_10348:HG4_PB_HySA_20883:HG2_PB_HySA_26163:HG3_PB_SVrefine2Falcon1Dovetail_8673:HG3_PB_SVrefine2PBcRDovetail_6760:HG2_PB_SVrefine2Falcon2Bionano_7133:HG2_PB_SVrefine2Falcon1plusDovetail_3156:HG2_PB_SVrefine2PB10Xhap12_10347;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_9321;NumExactMatchSVs=1;ClusterMaxShiftDist=0.250549;ClusterMaxSizeDiff=0.250549;ClusterMaxEditDist=0.277657;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=202;DistBack=17;DistForward=21;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=37;REFWIDENED=13:98715885-98715921;PctSeqSimilarity=0.9704;PctSizeSimilarity=0.995;PctRecOverlap=0.9901;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=98;MatchId=1532.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:3:21:1:19:./.:0:2:1:7:./.:2:4:./.:.:.:.:.:.
chr13	98734894	HG3_Ill_GATKHCSBGrefine_9467	A	AGACAGTTTGCCATTAACCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8723:HG4_PB_pbsv_14314:HG2_PB_HySA_26165:HG3_PB_pbsv_14009:HG4_PB_HySA_20885:HG2_PB_pbsv_14350:HG4_Ill_MetaSV_1424:HG4_Ill_GATKHCSBGrefine_9866:HG3_Ill_GATKHCSBGrefine_9467:HG2_Ill_MetaSV_1341:HG2_PB_SVrefine2Falcon1plusDovetail_3158:HG3_PB_SVrefine2Falcon1Dovetail_8676;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_MetaSV_1341:HG3_Ill_GATKHCSBGrefine_9467:HG4_Ill_GATKHCSBGrefine_9866:HG4_Ill_MetaSV_1424;NumExactMatchSVs=4;ClusterMaxShiftDist=0.11994;ClusterMaxSizeDiff=0.116942;ClusterMaxEditDist=0.266082;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=13643;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=13:98734895-98734914;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1533.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:28:./.:18:10:11:17:1|0:0:9:21:0:0/1:29:5:./.:4:33:.:.:.
chr13	99096115	HG3_Ill_manta_3244	G	GGGGTGCAGACAGGACCAGGAGGAGGGAACGGACAGTGGGGCAGGGGAGGGAAAGGACA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9964:HG2_PB_pbsv_14355:HG2_PB_HySA_26175:HG2_PB_PB10Xdip_9325:HG2_PB_PB10Xdip_9324:HG4_Ill_scalpel_13253:HG4_Ill_manta_3381:HG4_Ill_Krunchall_19847:HG4_Ill_GATKHC_22886:HG4_Ill_GATKHCSBGrefine_9870:HG4_Ill_Cortex_981:HG4_Ill_250bpfermikitraw_18911:HG4_Ill_150bpfermikitraw_18210:HG3_PB_assemblyticsfalcon_7332:HG3_Ill_manta_3244:HG3_Ill_Spiral_14928:HG3_Ill_Krunchall_19131:HG3_Ill_GATKHC_22820:HG3_Ill_GATKHCSBGrefine_9469:HG3_Ill_Cortex_1030:HG3_Ill_250bpfermikitraw_18620:HG3_Ill_150bpfermikitraw_18118:HG2_Ill_scalpel_13554:HG2_Ill_Krunchall_19514:HG2_Ill_GATKHC_22924:HG2_Ill_GATKHCSBGrefine_9572:HG2_Ill_Cortex_2369:HG2_Ill_250bpfermikitraw_19173:HG2_Ill_150bpfermikitraw_18086:HG2_Ill_breakscan11_4523:HG4_PB_HySA_20894:HG3_PB_HySA_21632:HG4_Ill_SVrefine2DISCOVARDovetail_10164:HG2_PB_SVrefine2PBcRplusDovetail_2977:HG2_PB_SVrefine2PB10Xhap12_10354:HG2_PB_SVrefine2Falcon2Bionano_7138;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18086:HG2_Ill_250bpfermikitraw_19173:HG2_Ill_Cortex_2369:HG2_Ill_GATKHCSBGrefine_9572:HG2_Ill_GATKHC_22924:HG2_Ill_Krunchall_19514:HG2_Ill_scalpel_13554:HG3_Ill_150bpfermikitraw_18118:HG3_Ill_250bpfermikitraw_18620:HG3_Ill_Cortex_1030:HG3_Ill_GATKHCSBGrefine_9469:HG3_Ill_GATKHC_22820:HG3_Ill_Krunchall_19131:HG3_Ill_Spiral_14928:HG3_Ill_manta_3244:HG3_PB_assemblyticsfalcon_7332:HG4_Ill_150bpfermikitraw_18210:HG4_Ill_250bpfermikitraw_18911:HG4_Ill_Cortex_981:HG4_Ill_GATKHCSBGrefine_9870:HG4_Ill_GATKHC_22886:HG4_Ill_Krunchall_19847:HG4_Ill_manta_3381:HG4_Ill_scalpel_13253;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0508475;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.1;PBcalls=10;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=58;DistBack=-1;DistForward=36;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=13:99096102-99096161;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1534.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:3:32:1:29:1/1:1:37:2:22:1/1:0:38:./.:.:.:.:.:.
chr13	99278636	HG2_PB_PB10Xdip_9334	G	GGAGGGGAGGGGGAGGAGGGGAGGGGAGGGCAGACGAGGGGAGGGGATGGGGAGGAGGGGAGGGGGAGGAGGGGAGGGGGAGGAGGGGAGGGGGAGGAGGGGAGGGGAGGGCAGACGAGGGGAGGGGACGGGGAGGAGGGGAGGGGAGGGCAGATGAGGGGAGGGGATGGGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8729:HG2_PB_SVrefine2PB10Xhap12_10357:HG3_PB_assemblyticsfalcon_7337:HG3_PB_SVrefine2Falcon1Dovetail_8683:HG3_PB_SVrefine2PBcRDovetail_6766:HG4_PB_pbsv_14324:HG4_PB_HySA_20898:HG2_PB_pbsv_14359:HG2_PB_PB10Xdip_9335:HG2_PB_PB10Xdip_9334:HG2_PB_SVrefine2PBcRplusDovetail_2980:HG2_PB_SVrefine2Falcon2Bionano_7141:HG2_PB_SVrefine2Falcon1plusDovetail_3164;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_9334:HG2_PB_PB10Xdip_9335;NumExactMatchSVs=2;ClusterMaxShiftDist=0.161491;ClusterMaxSizeDiff=0.161491;ClusterMaxEditDist=0.319489;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=172;DistBack=-30;DistForward=0;DistMin=-30;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=79;REFWIDENED=13:99278588-99278666;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9942;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:26:1/1:0:5:1:5:./.:1:7:1:7:./.:0:3:./.:.:.:.:.:.
chr13	99519873	HG2_Ill_breakscan11_4525	T	TAGAAATATCATTAGCGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAATAAATAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_26179:HG2_PB_PB10Xdip_9337:HG3_PB_assemblyticsfalcon_7339:HG2_Ill_breakscan11_4525:HG2_PB_HySA_26180:HG3_PB_SVrefine2Falcon1Dovetail_8684:HG2_PB_SVrefine2PBcRplusDovetail_2982:HG2_PB_SVrefine2Falcon2Bionano_7143:HG4_PB_SVrefine2Falcon1Dovetail_8730:HG2_PB_SVrefine2Falcon1plusDovetail_3166:HG2_PB_SVrefine2PB10Xhap12_10359;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_breakscan11_4525;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0112008;ClusterMaxSizeDiff=0.0112008;ClusterMaxEditDist=0.0383792;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=6066;DistBack=17420;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:99519874-99519889;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.9985;PctRecOverlap=0.9987;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1536.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:46:1|0:2:25:33:0:./.:1:5:25:0:0/1:19:9:0/1:242:782:.:5981:.
chr13	99764997	HG2_Ill_MetaSV_1343	A	ATGTAGCCTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGTG	20	PASS	ClusterIDs=HG2_PB_HySA_26183:HG2_PB_pbsv_14363:HG4_PB_pbsv_14327:HG2_PB_HySA_26184:HG4_PB_HySA_20903:HG4_PB_SVrefine2Falcon1Dovetail_8731:HG4_Ill_MetaSV_1426:HG2_Ill_MetaSV_1343:HG2_PB_SVrefine2Falcon2Bionano_7146:HG2_PB_SVrefine2Falcon1plusDovetail_3169;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_MetaSV_1343;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0620155;ClusterMaxSizeDiff=0.0589147;ClusterMaxEditDist=0.173252;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=398;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=13:99764998-99765009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1537.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:19:0|1:30:0:1:18:1|0:0:9:22:0:0/1:23:15:0/1:5:44:.:.:.
chr13	100082611	HG2_PB_SVrefine2PB10Xhap12_10364	T	TTATCCATCCATCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4527:HG2_PB_pbsv_14365:HG4_PB_pbsv_14329:HG3_PB_pbsv_14020:HG3_PB_HySA_21640:HG2_PB_PB10Xdip_8148:HG3_PB_SVrefine2PBcRDovetail_6768:HG3_PB_SVrefine2Falcon1Dovetail_8686:HG4_PB_SVrefine2Falcon1Dovetail_8733:HG2_PB_SVrefine2PBcRplusDovetail_2986:HG2_PB_SVrefine2PB10Xhap12_10364:HG2_PB_SVrefine2Falcon2Bionano_7148:HG2_PB_SVrefine2Falcon1plusDovetail_3171:HG2_Ill_SVrefine2DISCOVARplusDovetail_3524:HG2_10X_SVrefine210Xhap12_9968:HG2_PB_HySA_26189:HG4_PB_HySA_20911;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7148:HG2_PB_SVrefine2PB10Xhap12_10364:HG2_PB_SVrefine2PBcRplusDovetail_2986:HG4_PB_SVrefine2Falcon1Dovetail_8733;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0693816;ClusterMaxSizeDiff=0.0633484;ClusterMaxEditDist=0.206795;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=323;DistBack=-1;DistForward=16;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:100082612-100082627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1538.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:./.:0:1:0:3:./.:0:5:0:4:1/1:0:23:1/1:2:53:.:.:.
chr13	101104451	HG2_PB_pbsv_14369	T	TTTCCCCTCTTTTTCCTCTTCCCTCTCTCTCCTCTTGCCCCCCTCTCTCCTCTTTCCTCTCTCCTTTTCCTCTCCTCTCTCCTCTTCCTCTCTCTCTCTTTTCCTCTCTTCCTCCGTCTTTCCTCTCTCTCCATTTTCCTCTCGTCTCTCTCCTATTCCTCTCTCTCTCTCCTCTCTCGCTCTTCCTCTCTCTCTCTCCTCTTCCCTCTCTCTCCCTCCCTCTTCCTCTCTCCCTCCTCTTCCTCCTCTCTTCTCCTCTTCCTCTCTCTCTCCTCTCCTCTCTTCTCATCTCCTCTTCCATCTCGTCTCTCCCTCTTCCTCTCTCTCTTCTCCTCTTCCTCTCTTCTCTCCTCTTCTCTCTCTCCTCTTCCTCTCTCTCTCTTCCTCTTATCCTCTCTCTCTCTCCTCGTCCTCTCTTCTCCTCTTCCTCTCCTCTCCTCTTCCTCTCTCTCTCTCCGCTTCTCTTTTTCTCTCCCACTTCTCTCTCTCTCCTCTTCCTCCCTGTCTCCTCTTCCTCCCTCTCTCCTCTGCTCTTCTCTCTCCTCTTCCTCTCTCTCTCCCTTCCTACTCTTCTCTCTCCTCTTCCTCTCTGTCTCCTCCTTTTCCTCTCTGTCTCTTCCTCTCTCTGTCTCCTCTTCTTCTCCTCCTCCTCTCTGTCTCCCTCCTCTCTCTGTCTTCCTCCTCTCTCTGTCTCCTCTTCCTCTCTGTTTCTCTCTCTCTCTCCTTCTTCCCACTCTCTCTTCTCCTCACTCTCTCCTTCTCTCTTTCCTCTTCCTCTCTCCTCTCCCTCTCTCTCTCCTCTCCCCCTTTCTCCATTCCCTCTCCTCTCCTCTCCCTCTCTCTCCTCTCCCGCTCCTCTCTCCTCTCCCCTCCTCCTCTCCTCTCCTCTCTCTCCTCCCCTCCTCTCTCCTCTCCCTCTCTCTCTCCTCTCACTCTCTCCTCTCGCCTCCTCTCTCCTCCCCTTCTCTCTCTTCCTCCCTCTCTCTCTCCTTCCCCTCCTCTCTCCTCTCCCATCTCTCTCTCCTCTCCCTTCTCTCCTCTCCCTCTCTCTCCTCTCCTCTCCTCTCCTCTCCCTCTCTCTCCTCTCCCTCTCTTCTCCTCTCCCTCTCTCTCCTCTCCCTCTCTTCCCCTCCCCTCCTCTCCTCTCCCTCTCTCTCCTCGCCCTCTCTCTCTTTTCTCCCTCTCTCTCCCTCCCTCTCTCCCTCCTCTCCCCTCTCTCTTTCCTTCCTCTTCCCTCTCTTTCCTCCTCTTCCCTCTCTCCTCTCCTCCTCTTCCTCGTCTTCCTTTCTCTTCTCTCCTCTTTTCCATCTCCCTCTCTCTCCTCTTCTTCCTCTCCCTCTCTCCTCTCTTTTTTTTCTCCTCTTTCTCCTCCTC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8736:HG4_PB_pbsv_14334:HG2_PB_assemblyticsfalcon_7388:HG3_PB_pbsv_14024:HG2_PB_SVrefine2Falcon1plusDovetail_3176:HG4_PB_HySA_20920:HG4_PB_HySA_20919:HG3_PB_HySA_21647:HG2_PB_SVrefine2Falcon2Bionano_7151:HG3_PB_SVrefine2PBcRDovetail_6770:HG4_PB_assemblyticsfalcon_7262:HG4_PB_SVrefine2Falcon1Dovetail_8737:HG2_PB_pbsv_14369:HG2_PB_SVrefine2Falcon1plusDovetail_3175:HG3_PB_SVrefine2Falcon1Dovetail_8689:HG2_PB_SVrefine2PBcRplusDovetail_2989:HG2_PB_SVrefine2PB10Xhap12_10367;NumClusterSVs=17;ExactMatchIDs=HG2_PB_pbsv_14369;NumExactMatchSVs=1;ClusterMaxShiftDist=0.346509;ClusterMaxSizeDiff=0.346509;ClusterMaxEditDist=0.361001;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=6;NumTechs=1;NumTechsExact=1;SVLEN=1373;DistBack=292;DistForward=6242;DistMin=292;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=528;REFWIDENED=13:101103926-101104453;PctSeqSimilarity=0.9467;PctSizeSimilarity=0.965;PctRecOverlap=0.7691;SizeDiff=48;StartDistance=293;EndDistance=293;GTMatch=1;TruScore=89;MatchId=1539.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:72:1/1:1:34:3:21:./.:108:31:116:19:0/0:28:0:0/1:29:135:.:1603:.
chr13	101535961	HG2_Ill_MetaSV_1345	A	AGAGTTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1345:HG2_PB_pbsv_14370:HG3_PB_HySA_21650:HG3_PB_pbsv_14025:HG2_PB_HySA_26200:HG2_PB_assemblyticsfalcon_7391:HG2_Ill_breakscan11_4528:HG3_PB_SVrefine2PBcRDovetail_6771:HG2_PB_SVrefine2Falcon2Bionano_7152;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_MetaSV_1345:HG3_PB_SVrefine2PBcRDovetail_6771:HG2_PB_SVrefine2Falcon2Bionano_7152;NumExactMatchSVs=3;ClusterMaxShiftDist=0.12037;ClusterMaxSizeDiff=0.12037;ClusterMaxEditDist=0.263473;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=320;DistBack=2;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=13:101535962-101535973;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1540.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:37:0|1:18:6:7:27:1|0:0:11:34:0:0/1:37:8:0/1:8:36:.:.:.
chr13	101577232	HG2_Ill_GATKHCSBGrefine_9578	A	AAGCAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8690:HG2_PB_assemblyticsfalcon_7392:HG4_PB_assemblyticsfalcon_7266:HG3_PB_assemblyticsfalcon_7354:HG4_PB_pbsv_14335:HG2_PB_pbsv_14371:HG4_Ill_MetaSV_1428:HG4_Ill_GATKHCSBGrefine_9879:HG2_Ill_GATKHCSBGrefine_9578:HG2_PB_SVrefine2Falcon1plusDovetail_3177:HG4_PB_SVrefine2Falcon1Dovetail_8738;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9578:HG4_Ill_GATKHCSBGrefine_9879:HG4_Ill_MetaSV_1428;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0969697;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.194118;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=41;DistForward=48412;DistMin=41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=13:101577233-101577244;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:19:0|1:33:1:0:17:0|1:22:0:0:8:0/1:27:9:0/1:5:43:.:.:.
chr13	101986727	HG4_PB_SVrefine2Falcon1Dovetail_8743	A	AGGAGAGAGGCAATCCAGGAAGAATGGGATGAACACATACATTCAAGAAGAGAATGGAGAGAGGCATTCCAGGAAGAATGGATGAATACATACATTCAAGAAGAGAATGGAGAGAGGCATTCCAGGAAGAATGGGATGAATACATACATTCAAGAAGAGAATGGAGAGAGGCATTCCAGGAAGAATGGGATGAATACATACATTCAAGAAGAGAAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8743:HG4_PB_pbsv_14341:HG4_PB_HySA_20924:HG2_PB_HySA_26205:HG2_PB_SVrefine2Falcon2Bionano_7157:HG3_PB_SVrefine2Falcon1Dovetail_8695;NumClusterSVs=6;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_8743;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0138249;ClusterMaxSizeDiff=0.00921659;ClusterMaxEditDist=0.119816;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=215;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=111;REFWIDENED=13:101986728-101986838;PctSeqSimilarity=0.994;PctSizeSimilarity=0.9954;PctRecOverlap=0.8433;SizeDiff=-1;StartDistance=-33;EndDistance=-33;GTMatch=0;TruScore=94;MatchId=1542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:33:0|1:37:6:5:25:./.:10:0:3:13:0/1:16:7:./.:.:.:.:.:.
chr13	103346855	HG2_PB_SVrefine2PB10Xhap12_10380	CTG	AGCCTGCTGAGAGGAAAGAGCTGGACAAGGCCCGAGTCGCTCAGCCCAAGACATTCCCGAAGAGCTCTGAAAGGTGTAGCTTATCTGAGCTGAAAAGAACGCCTGCTTTTCAGCTTAGTTCCCTGAGTGAGCAAAGCAGCCACCCAAGGGACTGTTATCCTGGCTTTGCTGAGCAAGATGCAGAGAAACCATTACGCATTTCTGAACCTATGTGAGTGAAGAAATGCAAAAACAACAGCTTTGGCCTGAAAACCAGTTTTATGTTGCTCAGGGGCCTATAGCAAGTTTTTGTTCTTTTGAAAAATTATTCTTTGCCATCCTCCTCCCTACTCCAAATATTGCAGCCCATCACTAAGTTCTGGGACTCTACACTGTATCTCTAATAACTTCTGGAACTGAATCGTAAAATCTATCCAGACTTGCATACCACTGGGGGTACATGTGGATTCTGGGGTTAACGACATCATGGATGAGAAGCTGGGATTTGGAGCAAACACAAGGCTGCTCTGCTTTCCTCCTAGGCTCTATTGCAAGACAGTAGAAAGCACTGGGGCCGGGGCCAGGAGCTCGACTTGGCTCCCGCTCTAACACTGGGCAACTCACTCAGTCCCTCAGGGCCCATTTCCTCATCAGCGAAAAGGCGATCATAATATCCGCCTACCTCCTAAGGCTGCCGTGAGAAACAGAAGAGTGAAGGTGATTATTAAAGTGCGGGAAATGGTACCTGGTCCAGAACAAGAGACCTACCTATTGGGATCATTGATTGGTCTCAAAATAACGATGCCTGATGTTGCTGGAGGAATTCTCATATTGTTGCTGCGCATAGTTCTTGAAGGGCTTGATGTGTATTCATTGAATCCTCACAAAAACCCTATGAGGTAGACACTGGCATGACGCCTTGTCTCAGATGAGACAAATTCAGGCTCAGAGAAATTAAAAACCAGCGCAAGACCAGGCGCAGCTGGCCAGGGACGAGGCCAGGAGTCAGAGCCAGGATGGGCCATCCAGCCGAAGTCTCCATTGGTCCTCAGCAGGCAGGATGCAGCCCGAGTTGCCTTGGTTCTGACTTGGTTTCCCATGCCTGTTTCTCCTGAAATTTCTCATCATGTTTTGTGTATCTGAAGTCTATGCTGTCACAGTGACATTTTGTGGTCCCTTTTACAAAGTGTAAATGGTTCTCATCTGTGTTTACTGTCCTGGGTTTATTCCTCACACACACGAGTTGCCCATCACATTGAGGTTCCATCCAACTGAGGATGGAAGCTGGACACGCCAGCCACACCACAACTGACTAGCTCACCTAAGACCAGCACTAAATCCAGCCGTGCAGGCACGAAATTGCCCTCAGGGAACAAAGCATAAGAAAAAGCGCCAGGCCCCCACCATGTGGGTAATTCTGTCTATACCTGGGAGAGGCTGCGTGCCCCACACATGTCTACACAACAGATTTCAAAGCAATGAGATTGTGGTGGAAGTAATGTGGCATTTTCATTGACTCTAGAATCAAATAATCAACTATTTGATACAATTTCCCAGCTCACCAAGCCAGCCAAGAATGCTCTACCAGGCTCTGATTCACAGGAGAATTTGTTTATCTTACAGGTGCTCACTTTCTCCTTCTTTCCAACTTTCTCACAACTGCAGGAAGTTAATTGTTCCCCCTAGAAAGTAGCAGACTGGTTGTTACAAAGTACCTGGAGGGTCCGCAATGTAGACGTCTCAGCACTGTGGTGAGAAACCTGCCTGCCCTTGACTCTTGGCTGTGCCATGTACAATCCAAGTAAATAATGTAGATGATGGTGACACCTGCTTCATACTATGATTGTGGGAATTAAGAGGGGTCGCCCATGCAAAGCCTCCTGCGTATACAATATCAACTGTTGTTATTGTCTCCAGAGTTACAGAGGAGATACACAGTGTGACACTGTGTACGGAATTTCAACCTGTCACCATGGGACCCTGCACACTAAATCTAAGCCATCTTCATTTTACATGCAAGAAAAGAACTATTTTCAGTCAAATACCAGTGACAGTTTTCCTTGTGCAGTGAAATGATAACCTCCCCATCACTGTAGATATGACAAATTAATTTT	20	PASS	ClusterIDs=HG2_Ill_Spiral_956:HG3_PB_pbsv_14035:HG4_PB_SVrefine2Falcon1Dovetail_8750:HG4_PB_pbsv_14347:HG2_PB_SVrefine2Falcon1plusDovetail_3186:HG2_PB_pbsv_14381:HG3_Ill_SVrefine2DISCOVARDovetail_10318:HG2_PB_SVrefine2PBcRplusDovetail_3000:HG2_PB_SVrefine2PB10Xhap12_10380:HG2_PB_PB10Xdip_8162:HG2_Ill_SVrefine2DISCOVARplusDovetail_3538:HG2_10X_SVrefine210Xhap12_9985:HG2_PB_SVrefine2Falcon2Bionano_7162:HG4_Ill_SVrefine2DISCOVARDovetail_10186:HG3_PB_SVrefine2PBcRDovetail_6780:HG3_PB_SVrefine2Falcon1Dovetail_8703:HG4_PB_HySA_20940:HG2_PB_HySA_26220:HG3_Ill_Spiral_14950:HG4_Ill_Spiral_1115;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9985:HG2_Ill_SVrefine2DISCOVARplusDovetail_3538:HG2_PB_PB10Xdip_8162:HG2_PB_SVrefine2PB10Xhap12_10380:HG2_PB_SVrefine2PBcRplusDovetail_3000:HG3_Ill_SVrefine2DISCOVARDovetail_10318;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0449333;ClusterMaxSizeDiff=0.0444652;ClusterMaxEditDist=0.252699;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=2090;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=13:103346858-103346854;PctSeqSimilarity=0.9981;PctSizeSimilarity=0.9986;PctRecOverlap=0.9971;SizeDiff=3;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:94:1/1:0:35:0:29:./.:0:4:0:13:1/1:0:48:1/1:9:200:.:2151:.
chr13	103435913	HG2_PB_SVrefine2Falcon1plusDovetail_3189	G	AGGTGCCACACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCCCGGCTCACTGCAGGCTCCGCCCCCTGGGTTCACGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8164:HG3_PB_HySA_21667:HG2_PB_pbsv_14383:HG3_PB_pbsv_14037:HG2_Ill_MetaSV_1350:HG2_PB_HySA_26222:HG2_PB_assemblyticsfalcon_7410:HG2_PB_SVrefine2Falcon1plusDovetail_3189:HG2_PB_assemblyticsPBcR_7138:HG2_PB_SVrefine2PBcRplusDovetail_3002:HG2_PB_SVrefine2PB10Xhap12_10382;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3189:HG2_PB_assemblyticsfalcon_7410;NumExactMatchSVs=2;ClusterMaxShiftDist=0.139344;ClusterMaxSizeDiff=0.131148;ClusterMaxEditDist=0.172131;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=123;DistBack=7440;DistForward=49763;DistMin=7440;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:103435914-103435929;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9762;PctRecOverlap=0.9685;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:41:./.:12:10:12:25:./.:29:0:4:30:0/1:31:14:./.:.:.:.:.:.
chr13	104296222	HG2_PB_SVrefine2Falcon2Bionano_7165	G	GTCCTTGCCCACTTTTTTTTTTATTTTTTTTTTATTTTTATTTTTTATTTTTAATCTATTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCTCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCACAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTT	20	PASS	ClusterIDs=HG2_PB_HySA_26229:HG4_PB_pbsv_14351:HG2_PB_assemblyticsPBcR_7146:HG3_PB_pbsv_14047:HG4_PB_assemblyticsfalcon_7289:HG4_PB_HySA_20944:HG2_PB_PB10Xdip_8165:HG3_PB_HySA_21678:HG2_PB_SVrefine2Falcon1plusDovetail_3192:HG3_PB_SVrefine2PBcRDovetail_6786:HG3_Ill_MetaSV_1467:HG2_PB_SVrefine2PBcRplusDovetail_3005:HG2_PB_SVrefine2Falcon2Bionano_7165:HG2_Ill_MetaSV_1354:HG2_10X_SVrefine210Xhap12_9993:HG4_PB_SVrefine2Falcon1Dovetail_8755:HG3_PB_SVrefine2Falcon1Dovetail_8708:HG2_PB_SVrefine2PB10Xhap12_10385:HG4_Ill_MetaSV_1436;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9993:HG2_Ill_MetaSV_1354:HG2_PB_SVrefine2Falcon2Bionano_7165:HG2_PB_SVrefine2PBcRplusDovetail_3005:HG3_Ill_MetaSV_1467:HG3_PB_SVrefine2PBcRDovetail_6786;NumExactMatchSVs=6;ClusterMaxShiftDist=0.108798;ClusterMaxSizeDiff=0.108798;ClusterMaxEditDist=0.214121;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1023;DistBack=46541;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=13:104296223-104296238;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1545.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:70:1/1:0:12:0:28:./.:0:7:0:3:1/1:0:37:./.:21:285:.:.:.
chr13	105217121	HG2_Ill_SpiralSDKrefine_4615	G	GCTGACAATTATACACACATGCTCAGACACACACAACTCACAAGCTAACACACCCACACACATGCTCTCTCACACACACACATGCTCATACACACACATGGGCTACACTCACCCTCACAGACA	20	PASS	ClusterIDs=HG3_PB_pbsv_14055:HG4_PB_HySA_20955:HG2_PB_pbsv_14392:HG4_PB_pbsv_14358:HG2_PB_PB10Xdip_8171:HG4_PB_assemblyticsfalcon_7296:HG2_PB_assemblyticsPBcR_7151:HG3_PB_SVrefine2Falcon1Dovetail_8715:HG4_PB_SVrefine2PBcRDovetail_7166:HG4_PB_SVrefine2Falcon1Dovetail_8760:HG4_Ill_manta_3391:HG4_Ill_SVrefine2DISCOVARDovetail_10198:HG4_Ill_MetaSV_1439:HG4_Ill_GATKHCSBGrefine_9902:HG3_PB_SVrefine2PBcRDovetail_6792:HG3_Ill_manta_3256:HG3_Ill_Spiral_14966:HG3_Ill_SVrefine2DISCOVARDovetail_10330:HG3_Ill_MetaSV_1471:HG3_Ill_GATKHCSBGrefine_9493:HG2_PB_SVrefine2PBcRplusDovetail_3011:HG2_PB_SVrefine2PB10Xhap12_10391:HG2_PB_SVrefine2Falcon2Bionano_7171:HG2_PB_SVrefine2Falcon1plusDovetail_3198:HG2_Ill_manta_3986:HG2_Ill_SpiralSDKrefine_4615:HG2_Ill_SVrefine2DISCOVARplusDovetail_3549:HG2_Ill_MetaSV_1358:HG2_Ill_GATKHCSBGrefine_9596:HG2_Ill_250bpfermikitraw_19215:HG2_Ill_150bpfermikitraw_18127:HG2_10X_SVrefine210Xhap12_9999:HG2_PB_HySA_26234:HG2_Ill_breakscan11_4529;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9999:HG2_Ill_150bpfermikitraw_18127:HG2_Ill_250bpfermikitraw_19215:HG2_Ill_GATKHCSBGrefine_9596:HG2_Ill_MetaSV_1358:HG2_Ill_SVrefine2DISCOVARplusDovetail_3549:HG2_Ill_SpiralSDKrefine_4615:HG2_Ill_manta_3986:HG2_PB_SVrefine2Falcon1plusDovetail_3198:HG2_PB_SVrefine2Falcon2Bionano_7171:HG2_PB_SVrefine2PB10Xhap12_10391:HG2_PB_SVrefine2PBcRplusDovetail_3011:HG3_Ill_GATKHCSBGrefine_9493:HG3_Ill_MetaSV_1471:HG3_Ill_SVrefine2DISCOVARDovetail_10330:HG3_Ill_Spiral_14966:HG3_Ill_manta_3256:HG3_PB_SVrefine2PBcRDovetail_6792:HG4_Ill_GATKHCSBGrefine_9902:HG4_Ill_MetaSV_1439:HG4_Ill_SVrefine2DISCOVARDovetail_10198:HG4_Ill_manta_3391:HG4_PB_SVrefine2Falcon1Dovetail_8760:HG4_PB_SVrefine2PBcRDovetail_7166;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0873016;ClusterMaxSizeDiff=0.0634921;ClusterMaxEditDist=0.239382;PBcalls=16;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=122;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=13:105217122-105217122;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1546.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:64:./.:0:3:1:17:1/1:1:55:0:38:1/1:0:15:./.:.:.:.:.:.
chr13	105433395	HG2_Ill_GATKHC_22978	G	GTGGGTGGAATGGCTGGGTTGCTGGAATGGCTGGGTTGGTGGCTGGAATGGCTGAGTGGGTGGCTGAAATGGCTGAC	20	PASS	ClusterIDs=HG2_Ill_GATKHC_22978:HG3_PB_pbsv_14060:HG3_Ill_GATKHC_22873:HG2_PB_pbsv_14397;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHC_22978:HG3_Ill_GATKHC_22873;NumExactMatchSVs=2;ClusterMaxShiftDist=0.167742;ClusterMaxSizeDiff=0.167742;ClusterMaxEditDist=0.309677;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=1963;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=469;REFWIDENED=13:105433303-105433771;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1547.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:32:./.:22:10:14:16:./.:74:16:22:58:0/1:7:4:./.:.:.:.:.:.
chr13	105714920	HG2_PB_SVrefine2PBcRplusDovetail_3015	T	TGACTTTGCTGCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCTACCCGCCTCGGCCTCCCAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8175:HG2_PB_pbsv_14399:HG4_PB_HySA_20963:HG4_PB_pbsv_14363:HG2_PB_SVrefine2Falcon2Bionano_7176:HG3_PB_pbsv_14062:HG2_PB_HySA_26248:HG4_PB_SVrefine2Falcon1Dovetail_8765:HG2_PB_SVrefine2PBcRplusDovetail_3015:HG2_PB_SVrefine2PB10Xhap12_10396:HG2_10X_SVrefine210Xhap12_10003:HG4_PB_SVrefine2PBcRDovetail_7172:HG2_PB_SVrefine2Falcon1plusDovetail_3203:HG3_PB_SVrefine2Falcon1Dovetail_8720;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10003:HG2_PB_SVrefine2PB10Xhap12_10396:HG2_PB_SVrefine2PBcRplusDovetail_3015:HG4_PB_SVrefine2Falcon1Dovetail_8765;NumExactMatchSVs=4;ClusterMaxShiftDist=0.15311;ClusterMaxSizeDiff=0.14992;ClusterMaxEditDist=0.294671;PBcalls=13;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=291;DistBack=-13;DistForward=26594;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6822;REFWIDENED=13:105724794-105714937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1548.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:./.:0:0:0:0:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr13	106297134	HG2_Ill_SVrefine2DISCOVARplusDovetail_3556	C	CTCCCTCCCTCCTTCCTCCCTCCCTCCTTCTTCCCTCCCTCCCTTCCTCCCTCCCTCCTTCCTTGCTCCCTCCTTCCTTCCTTCCATCTTTCCTTCCTTCCTTCCTTCCTTCATTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCATTCCTTCCTTCCTTCCTTCCATCTTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCTTTCTTCCTTCTTCCCTTTCTCCCTCCCTTCCTTCCTTTCTTCCTTACCTCAA	20	PASS	ClusterIDs=HG3_PB_pbsv_14065:HG3_PB_HySA_21702:HG3_PB_assemblyticsfalcon_7403:HG4_PB_assemblyticsfalcon_7310:HG4_PB_SVrefine2Falcon1Dovetail_8768:HG3_PB_SVrefine2Falcon1Dovetail_8723:HG4_PB_HySA_20970:HG2_PB_HySA_26256:HG4_Ill_SVrefine2DISCOVARDovetail_10205:HG3_PB_SVrefine2PBcRDovetail_6798:HG3_Ill_SVrefine2DISCOVARDovetail_10338:HG2_PB_SVrefine2PBcRplusDovetail_3019:HG2_PB_SVrefine2PB10Xhap12_10401:HG2_Ill_SVrefine2DISCOVARplusDovetail_3556:HG2_PB_SVrefine2Falcon2Bionano_7180:HG2_PB_SVrefine2Falcon1plusDovetail_3206:HG4_PB_SVrefine2PBcRDovetail_7175:HG4_PB_pbsv_14368:HG2_PB_pbsv_14404;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3556:HG2_PB_SVrefine2PB10Xhap12_10401:HG2_PB_SVrefine2PBcRplusDovetail_3019:HG3_Ill_SVrefine2DISCOVARDovetail_10338:HG3_PB_SVrefine2PBcRDovetail_6798:HG4_Ill_SVrefine2DISCOVARDovetail_10205;NumExactMatchSVs=6;ClusterMaxShiftDist=0.136986;ClusterMaxSizeDiff=0.136986;ClusterMaxEditDist=0.290258;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=256;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=118;REFWIDENED=13:106297135-106297252;PctSeqSimilarity=0.9716;PctSizeSimilarity=0.9446;PctRecOverlap=0.9483;SizeDiff=-15;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=95;MatchId=1549.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:1:14:2:15:1/1:0:31:1:26:./.:1:20:./.:.:.:.:.:.
chr13	108539740	HG3_Ill_GATKHC_22907	C	CTGCACACTTTTAAACAACCAGATCTCATGAGAACTCACTATTATGAGAAGAGCAAGGGGGAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_14413:HG3_PB_pbsv_14073:HG2_PB_PB10Xdip_8183:HG4_PB_HySA_20992:HG3_Ill_Spiral_14994:HG4_PB_pbsv_14373:HG2_Ill_manta_3992:HG4_PB_assemblyticsfalcon_7324:HG4_Ill_svaba_17993:HG4_Ill_Krunchall_19939:HG4_Ill_GATKHC_22979:HG4_Ill_GATKHCSBGrefine_9917:HG4_Ill_250bpfermikitraw_18999:HG4_Ill_150bpfermikitraw_18294:HG3_PB_assemblyticsfalcon_7423:HG3_Ill_svaba_18124:HG3_Ill_manta_3260:HG3_Ill_Krunchall_19219:HG3_Ill_GATKHC_22907:HG3_Ill_GATKHCSBGrefine_9505:HG3_Ill_250bpfermikitraw_18699:HG3_Ill_150bpfermikitraw_18193:HG2_PB_assemblyticsfalcon_7455:HG2_PB_assemblyticsPBcR_7184:HG2_Ill_svaba_17957:HG2_Ill_Krunchall_19600:HG2_Ill_GATKHC_23013:HG2_Ill_GATKHCSBGrefine_9610:HG2_Ill_250bpfermikitraw_19252:HG2_Ill_150bpfermikitraw_18160:HG2_PB_HySA_26278:HG3_PB_HySA_21719;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18160:HG2_Ill_250bpfermikitraw_19252:HG2_Ill_GATKHCSBGrefine_9610:HG2_Ill_GATKHC_23013:HG2_Ill_Krunchall_19600:HG2_Ill_svaba_17957:HG2_PB_assemblyticsPBcR_7184:HG2_PB_assemblyticsfalcon_7455:HG3_Ill_150bpfermikitraw_18193:HG3_Ill_250bpfermikitraw_18699:HG3_Ill_GATKHCSBGrefine_9505:HG3_Ill_GATKHC_22907:HG3_Ill_Krunchall_19219:HG3_Ill_manta_3260:HG3_Ill_svaba_18124:HG3_PB_assemblyticsfalcon_7423:HG4_Ill_150bpfermikitraw_18294:HG4_Ill_250bpfermikitraw_18999:HG4_Ill_GATKHCSBGrefine_9917:HG4_Ill_GATKHC_22979:HG4_Ill_Krunchall_19939:HG4_Ill_svaba_17993:HG4_PB_assemblyticsfalcon_7324;NumExactMatchSVs=23;ClusterMaxShiftDist=0.122137;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.251852;PBcalls=11;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=63;DistBack=11748;DistForward=17058;DistMin=11748;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=13:108539739-108539742;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1551.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:82:1/1:2:32:1:37:1/1:1:30:1:19:1/1:0:38:./.:.:.:.:.:.
chr13	108669012	HG3_PB_SVrefine2PBcRDovetail_6802	T	TAAAGTATGTTCTAATCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGAGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4531:HG3_PB_pbsv_14075:HG2_PB_assemblyticsfalcon_7458:HG2_PB_pbsv_14416:HG2_PB_assemblyticsPBcR_7189:HG3_PB_assemblyticsfalcon_7425:HG4_PB_assemblyticsfalcon_7327:HG4_PB_HySA_20994:HG2_PB_PB10Xdip_8185:HG2_PB_SVrefine2Falcon1plusDovetail_3214:HG3_PB_SVrefine2Falcon1Dovetail_8729:HG4_PB_SVrefine2Falcon1Dovetail_8772:HG2_10X_SVrefine210Xhap12_10018:HG4_Ill_MetaSV_1449:HG3_PB_SVrefine2PBcRDovetail_6802:HG3_Ill_MetaSV_1478:HG2_PB_SVrefine2PBcRplusDovetail_3026:HG2_PB_SVrefine2PB10Xhap12_10410:HG2_Ill_MetaSV_1369:HG2_PB_SVrefine2Falcon2Bionano_7188:HG4_PB_pbsv_14376:HG3_PB_HySA_21722:HG2_PB_HySA_26281;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_MetaSV_1369:HG2_PB_SVrefine2PB10Xhap12_10410:HG2_PB_SVrefine2PBcRplusDovetail_3026:HG3_Ill_MetaSV_1478:HG3_PB_SVrefine2PBcRDovetail_6802:HG4_Ill_MetaSV_1449;NumExactMatchSVs=6;ClusterMaxShiftDist=0.169279;ClusterMaxSizeDiff=0.169279;ClusterMaxEditDist=0.253918;PBcalls=18;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=322;DistBack=3250;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=13:108669013-108669030;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:55:1/1:0:23:1:26:1/1:0:7:0:7:1/1:0:22:1/1:1:73:.:.:.
chr13	108695325	HG4_Ill_250bpfermikitraw_19003	A	AGTAGTTCTGCTTTTGCCCTTTGCCTTGTGGTCTTTGTTGGACCCTTATCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10019:HG2_PB_pbsv_14417:HG4_Ill_svaba_17997:HG4_PB_pbsv_14377:HG4_Ill_Krunchall_19944:HG4_Ill_GATKHC_22983:HG4_Ill_GATKHCSBGrefine_9921:HG4_Ill_250bpfermikitraw_19003:HG4_Ill_150bpfermikitraw_18298:HG2_Ill_svaba_17961:HG2_Ill_Krunchall_19604:HG2_Ill_GATKHC_23017:HG2_Ill_GATKHCSBGrefine_9614:HG2_Ill_250bpfermikitraw_19256:HG2_Ill_150bpfermikitraw_18163:HG2_Ill_SVrefine2DISCOVARplusDovetail_3563;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18163:HG2_Ill_250bpfermikitraw_19256:HG2_Ill_GATKHCSBGrefine_9614:HG2_Ill_GATKHC_23017:HG2_Ill_Krunchall_19604:HG2_Ill_svaba_17961:HG4_Ill_150bpfermikitraw_18298:HG4_Ill_250bpfermikitraw_19003:HG4_Ill_GATKHCSBGrefine_9921:HG4_Ill_GATKHC_22983:HG4_Ill_Krunchall_19944:HG4_Ill_svaba_17997;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0754717;ClusterMaxSizeDiff=0.0754717;ClusterMaxEditDist=0.277778;PBcalls=2;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=50;DistBack=143;DistForward=24482;DistMin=143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=13:108695315-108695347;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1553.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:31:0|1:52:1:1:28:./.:1:10:20:0:0/1:26:24:./.:.:.:.:.:.
chr13	108719808	HG2_Ill_GATKHCSBGrefine_9615	T	TAATAATTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCCCTGTCACCCAGGCCGAACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3027:HG3_PB_pbsv_14076:HG2_PB_pbsv_14418:HG3_PB_assemblyticsfalcon_7426:HG4_PB_assemblyticsfalcon_7328:HG2_PB_assemblyticsfalcon_7459:HG2_PB_assemblyticsPBcR_7190:HG3_PB_SVrefine2Falcon1Dovetail_8730:HG4_PB_SVrefine2Falcon1Dovetail_8773:HG3_Ill_MetaSV_1479:HG3_Ill_GATKHCSBGrefine_9508:HG2_PB_SVrefine2Falcon2Bionano_7189:HG2_Ill_MetaSV_1370:HG2_Ill_GATKHCSBGrefine_9615:HG2_10X_SVrefine210Xhap12_10020:HG2_PB_SVrefine2Falcon1plusDovetail_3215;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10020:HG2_Ill_GATKHCSBGrefine_9615:HG2_Ill_MetaSV_1370:HG2_PB_SVrefine2Falcon2Bionano_7189:HG3_Ill_GATKHCSBGrefine_9508:HG3_Ill_MetaSV_1479;NumExactMatchSVs=6;ClusterMaxShiftDist=0.135861;ClusterMaxSizeDiff=0.135861;ClusterMaxEditDist=0.199052;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=317;DistBack=-1;DistForward=48593;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=13:108719809-108719818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1554.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:41:0|1:28:5:1:30:0|1:30:0:0:12:0/1:18:10:0/1:5:27:.:.:.
chr13	108768402	HG4_Ill_150bpfermikitraw_18299	T	TTGTTTCATCAACTCCCAGTGGTATGAACTAGGATCCTATTAGGGTCTTCCGTGAAGTTCACACTCCAGCCCACA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4532:HG2_PB_pbsv_14419:HG3_PB_HySA_21723:HG3_PB_pbsv_14077:HG4_PB_HySA_20995:HG4_PB_pbsv_14378:HG4_PB_assemblyticsfalcon_7329:HG2_PB_assemblyticsPBcR_7191:HG3_PB_assemblyticsfalcon_7427:HG3_Ill_Spiral_14996:HG3_Ill_SVrefine2DISCOVARDovetail_10345:HG2_Ill_manta_3995:HG2_Ill_SpiralSDKrefine_4642:HG2_Ill_SVrefine2DISCOVARplusDovetail_3564:HG2_Ill_Krunchall_19605:HG2_Ill_GATKHC_23018:HG2_Ill_GATKHCSBGrefine_9616:HG2_Ill_250bpfermikitraw_19257:HG2_Ill_150bpfermikitraw_18164:HG2_10X_SVrefine210Xhap12_10021:HG4_PB_SVrefine2Falcon1Dovetail_8774:HG4_Ill_svaba_17998:HG4_Ill_manta_3397:HG4_Ill_SVrefine2DISCOVARDovetail_10216:HG4_Ill_Krunchall_19945:HG4_Ill_GATKHC_22984:HG4_Ill_GATKHCSBGrefine_9922:HG4_Ill_250bpfermikitraw_19004:HG4_Ill_150bpfermikitraw_18299:HG3_PB_SVrefine2PBcRDovetail_6803:HG3_Ill_svaba_18126:HG3_Ill_manta_3261:HG3_Ill_Krunchall_19221:HG3_Ill_GATKHC_22909:HG3_Ill_GATKHCSBGrefine_9509:HG3_Ill_250bpfermikitraw_18701:HG2_Ill_svaba_17962:HG2_PB_HySA_26282;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_svaba_17962:HG3_Ill_250bpfermikitraw_18701:HG3_Ill_GATKHCSBGrefine_9509:HG3_Ill_GATKHC_22909:HG3_Ill_Krunchall_19221:HG3_Ill_manta_3261:HG3_Ill_svaba_18126:HG3_PB_SVrefine2PBcRDovetail_6803:HG4_Ill_150bpfermikitraw_18299:HG4_Ill_250bpfermikitraw_19004:HG4_Ill_GATKHCSBGrefine_9922:HG4_Ill_GATKHC_22984:HG4_Ill_Krunchall_19945:HG4_Ill_SVrefine2DISCOVARDovetail_10216:HG4_Ill_manta_3397:HG4_Ill_svaba_17998:HG4_PB_SVrefine2Falcon1Dovetail_8774;NumExactMatchSVs=17;ClusterMaxShiftDist=0.198582;ClusterMaxSizeDiff=0.184397;ClusterMaxEditDist=0.297872;PBcalls=11;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=74;DistBack=48593;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=13:108768403-108768404;PctSeqSimilarity=0.9933;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:33:0|1:21:0:1:36:0|1:23:0:1:35:0/1:19:32:./.:.:.:.:.:.
chr13	108867775	HG2_PB_SVrefine2Falcon2Bionano_7190	C	CCTCCCAACCCCCCACCCCCCCGCCCCCACCTCCCAGCCCCCCACCCCCCCGCCCCCACCTCCCAACCCCCCACCCCCCCGCCCCCACCT	10	PASS	ClusterIDs=HG2_PB_pbsv_14420:HG2_PB_assemblyticsPBcR_7192:HG4_PB_HySA_20996:HG4_PB_pbsv_14379:HG2_PB_PB10Xdip_8187:HG4_PB_SVrefine2PBcRDovetail_7179:HG2_PB_SVrefine2Falcon2Bionano_7190:HG2_PB_SVrefine2PB10Xhap12_10412:HG2_PB_SVrefine2PBcRplusDovetail_3028:HG2_PB_HySA_26283:HG3_PB_HySA_21724:HG4_PB_assemblyticsfalcon_7331:HG3_PB_assemblyticsfalcon_7429:HG2_PB_assemblyticsfalcon_7460:HG3_PB_pbsv_14078;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7190:HG4_PB_SVrefine2PBcRDovetail_7179;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0935673;ClusterMaxSizeDiff=0.0809249;ClusterMaxEditDist=0.315789;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=89;DistBack=8258;DistForward=42773;DistMin=8258;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=13:108867776-108867776;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1556.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:37:1/1:1:18:2:12:./.:0:1:0:1:./.:0:1:./.:.:.:.:.:.
chr13	109110917	HG4_PB_HySA_21003	T	TCCCCTCTTCCCTCTCTCCCCTCCCTCTCTCACCTCCTCCCCCTCCATCTCTCCCCCCTCCATCTCTCCCCCCTCCCTCTCTCCCCCCTTCCCTCTCTGCCCTTTCCCTCTCTCCCCAACTTCCCTCTCTCCCAACTTCCCTCTCTCCCCAACTTCCCCTCTCTCCCCACTTCCCTCTCTCCCCAACTTTCCTCTCTCCCCAAATTCCCTCTCTCCCCACTTCCTCTCTCTCCCCCCTTCCCTCTCTCCCCCCTTCCTTCTTTCCCCCTCCTCTCCCCCTTCCCTCTCTCCCCCTTCCCTCTCTCTCCCCTTCCCTCTCTCCCCCTCCCTCTCTCACCTCCTCCCCCTCCATCTCTCCCCCCTCCATCTCTCCCCCCTCCATCTCTCCCCCCTCTCTCCCCCCTTCCCTCTCTGCCCCTTTCCCCTCTCTCCCCAACTTCCCTCTCTCCCCAACTTCCCTCTCTCCCCAACTTCCCTCTCTCCCAAATTCCCTCTCTCCCCACTTCCCTCTCTCCCCCCTTCCTTCTTTCCCCCTCCTCTCCCCCTTCCCTCTCCCCCTTCCCTCTCTCCCCTCCCTCTCTCCCCTCCCTCTCTCCCCCTCCCTCTCTCCCCCCTCCCTCTCTCCCTCCTCCCTCTCTCCCCCCTCCCTCTCTCCCCCCTTCCCTCTCTGCCCCTTTTCTCTCTCTCCCCCCTTCCCTCTCTCCCCCTTCCCTCTCTCCCCCTCTTCCTCTCTCCCCCCTTCCCTCTCTCCCCGGCTCCCTCTCTCCCCTGCTCCCTCTCTCCCCTCTCCCTCTCTCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3031:HG2_PB_pbsv_14424:HG3_PB_pbsv_14082:HG4_PB_HySA_21003:HG4_PB_pbsv_14383:HG2_PB_HySA_26291:HG2_PB_HySA_26290:HG4_PB_SVrefine2PBcRDovetail_7182:HG4_PB_SVrefine2Falcon1Dovetail_8777:HG4_PB_assemblyticsfalcon_7335:HG3_PB_SVrefine2Falcon1Dovetail_8733:HG3_PB_HySA_21727:HG3_PB_SVrefine2PBcRDovetail_6806:HG2_PB_assemblyticsPBcR_7195:HG2_PB_assemblyticsfalcon_7463:HG2_PB_SVrefine2Falcon1plusDovetail_3218:HG2_PB_SVrefine2Falcon2Bionano_7193:HG2_PB_SVrefine2PB10Xhap12_10415;NumClusterSVs=18;ExactMatchIDs=HG4_PB_HySA_21003;NumExactMatchSVs=1;ClusterMaxShiftDist=0.304693;ClusterMaxSizeDiff=0.304693;ClusterMaxEditDist=0.329446;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=797;DistBack=14;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=70;REFWIDENED=13:109110877-109110946;PctSeqSimilarity=0.9869;PctSizeSimilarity=0.9938;PctRecOverlap=0.9913;SizeDiff=-5;StartDistance=-4;EndDistance=-4;GTMatch=1;TruScore=99;MatchId=1557.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:47:1/1:0:13:4:26:./.:13:63:1:31:./.:1:5:0/1:7:44:.:.:.
chr13	109180973	HG2_PB_SVrefine2Falcon2Bionano_7194	C	CCTTTCCCCTCCTCTCCCCTCTCCTCTCCTCTCTTCTCCTTTCCCCTCCTCTCCCCTCCCCTCTCCTTTCCCCTCCTCTCCCCTCCCCTCTCCTTTCCCCTCCTCTCCCCTCCCCTCTCCTCTCCTCTCCACTCCTTTCCCCTCCCCTCCTCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8778:HG2_PB_assemblyticsfalcon_7464:HG2_PB_SVrefine2Falcon1plusDovetail_3219:HG2_PB_PB10Xdip_8194:HG2_PB_assemblyticsPBcR_7196:HG3_PB_assemblyticsfalcon_7433:HG2_PB_SVrefine2PBcRplusDovetail_3032:HG2_PB_SVrefine2PB10Xhap12_10416:HG2_PB_SVrefine2Falcon2Bionano_7194:HG4_PB_SVrefine2PBcRDovetail_7183:HG3_PB_SVrefine2Falcon1Dovetail_8734:HG3_PB_SVrefine2PBcRDovetail_6807:HG2_PB_pbsv_14425:HG3_PB_pbsv_14083;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7194:HG2_PB_SVrefine2PB10Xhap12_10416:HG2_PB_SVrefine2PBcRplusDovetail_3032;NumExactMatchSVs=3;ClusterMaxShiftDist=0.199377;ClusterMaxSizeDiff=0.185185;ClusterMaxEditDist=0.339506;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=152;DistBack=-1;DistForward=86215;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=244;REFWIDENED=13:109180897-109181140;PctSeqSimilarity=0.9189;PctSizeSimilarity=0.8492;PctRecOverlap=0.8547;SizeDiff=-27;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=87;MatchId=1558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:39:./.:0:0:0:0:./.:1:3:1:8:./.:0:3:./.:.:.:.:.:.
chr13	109643897	HG2_PB_SVrefine2PB10Xhap12_10418	T	TCTGACTCACTGCTTGCATAGCATGAGAAGACACAAGTATAGCTAGTGAGGACCAC	20	PASS	ClusterIDs=HG4_PB_HySA_21010:HG2_PB_HySA_26301:HG4_PB_SVrefine2Falcon1Dovetail_8780:HG4_PB_pbsv_14387:HG3_PB_SVrefine2Falcon1Dovetail_8736:HG2_PB_pbsv_14427:HG3_Ill_250bpfermikitraw_18707:HG2_PB_SVrefine2PBcRplusDovetail_3034:HG2_PB_SVrefine2PB10Xhap12_10418:HG2_PB_SVrefine2Falcon2Bionano_7196:HG2_PB_SVrefine2Falcon1plusDovetail_3221:HG2_Ill_GATKHCSBGrefine_9619:HG2_PB_PB10Xdip_8195:HG3_PB_HySA_21733:HG3_PB_pbsv_14086;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9619:HG2_PB_SVrefine2Falcon1plusDovetail_3221:HG2_PB_SVrefine2Falcon2Bionano_7196:HG2_PB_SVrefine2PB10Xhap12_10418:HG2_PB_SVrefine2PBcRplusDovetail_3034:HG3_Ill_250bpfermikitraw_18707:HG3_PB_SVrefine2Falcon1Dovetail_8736:HG4_PB_SVrefine2Falcon1Dovetail_8780;NumExactMatchSVs=8;ClusterMaxShiftDist=0.152542;ClusterMaxSizeDiff=0.135593;ClusterMaxEditDist=0.370968;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=55;DistBack=19234;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=225;REFWIDENED=13:109643898-109644122;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1559.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:37:0|1:15:3:1:27:0/0:8:0:8:0:./.:30:2:./.:.:.:.:.:.
chr13	109701356	HG3_PB_pbsv_14090	C	CCCTCACGAGGATAGAAAAATTTTAGTGCCTAAGATTAGAAGTAAAGTCTACTTCACTCAAAAGGAGGCAGAAAAAAAAAAAAAAAAAAAAAAGCCGGAAACTCAGACTTTTTAATTTCATTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7198:HG3_PB_HySA_21736:HG4_PB_pbsv_14391:HG3_PB_pbsv_14090:HG2_PB_HySA_26304:HG4_PB_HySA_21013:HG3_PB_SVrefine2Falcon1Dovetail_8737:HG2_PB_pbsv_14430;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_14090;NumExactMatchSVs=1;ClusterMaxShiftDist=0.13913;ClusterMaxSizeDiff=0.13913;ClusterMaxEditDist=0.318367;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=122;DistBack=-18;DistForward=26372;DistMin=-18;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=93;REFWIDENED=13:109701264-109701356;PctSeqSimilarity=0.9515;PctSizeSimilarity=0.9672;PctRecOverlap=0.626;SizeDiff=4;StartDistance=44;EndDistance=44;GTMatch=0;TruScore=84;MatchId=1560.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:0|1:25:2:0:25:./.:20:0:16:10:./.:12:1:./.:.:.:.:.:.
chr13	109887538	HG2_Ill_GATKHC_23037	C	CATATCTGTTGGCTTTATCAGGGGTTTCTGATACTGTTCTCGTGGTAGTGAATAAGTCTCACA	20	PASS	ClusterIDs=HG4_PB_pbsv_14394:HG2_PB_PB10Xdip_8199:HG3_PB_pbsv_14091:HG4_PB_assemblyticsfalcon_7349:HG4_Ill_manta_3401:HG4_Ill_GATKHC_23006:HG4_Ill_GATKHCSBGrefine_9929:HG4_Ill_250bpfermikitraw_19023:HG3_PB_assemblyticsfalcon_7445:HG3_Ill_manta_3263:HG3_Ill_GATKHC_22925:HG3_Ill_GATKHCSBGrefine_9515:HG2_Ill_manta_3997:HG2_Ill_Krunchall_19620:HG2_Ill_GATKHC_23037:HG2_Ill_GATKHCSBGrefine_9621:HG2_Ill_250bpfermikitraw_19271:HG2_PB_HySA_26307:HG2_PB_pbsv_14431:HG3_PB_HySA_21740:HG4_PB_SVrefine2PBcRDovetail_7186:HG3_Ill_SVrefine2DISCOVARDovetail_10349:HG2_PB_SVrefine2PBcRplusDovetail_3036:HG2_PB_SVrefine2PB10Xhap12_10421:HG2_PB_SVrefine2Falcon2Bionano_7199:HG2_PB_SVrefine2Falcon1plusDovetail_3223:HG2_Ill_SVrefine2DISCOVARplusDovetail_3571:HG2_10X_SVrefine210Xhap12_10026;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19271:HG2_Ill_GATKHCSBGrefine_9621:HG2_Ill_GATKHC_23037:HG2_Ill_Krunchall_19620:HG2_Ill_manta_3997:HG3_Ill_GATKHCSBGrefine_9515:HG3_Ill_GATKHC_22925:HG3_Ill_manta_3263:HG3_PB_assemblyticsfalcon_7445:HG4_Ill_250bpfermikitraw_19023:HG4_Ill_GATKHCSBGrefine_9929:HG4_Ill_GATKHC_23006:HG4_Ill_manta_3401:HG4_PB_assemblyticsfalcon_7349;NumExactMatchSVs=14;ClusterMaxShiftDist=0.107692;ClusterMaxSizeDiff=0.0923077;ClusterMaxEditDist=0.343284;PBcalls=13;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=62;DistBack=-48;DistForward=81;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=124;REFWIDENED=13:109887506-109887629;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:3:14:0:30:./.:3:23:2:15:1/1:2:39:./.:.:.:.:.:.
chr13	110907890	HG2_PB_SVrefine2Falcon1plusDovetail_3228	A	AAGGAAGGGAAGGGGGCAGGCAGGAAGGGCGGGCAGGCAGGCAGGAAGGGAAGGGGCAGGCAGGAAGGGAGGGGCAGGCAGGCAGGAAGGGAAGGGGGAAGGCAGGAAGGGAGGAGGAAGGCAGGAAGGGAGGGGGAAGGCAGGAAGGGAGGGGAAAGGCAGGAAGGGAGGGGGCAGGCAGGAAGGGAAGGGGGAAGGCAGGAAGGGAGGGGGAAGGCAGGAAGGGAGGGGCAGGCAGGAAGGGAAGGGGGCAGGCAGGAAGGGAGGGGAAGGCAGGAAGGGAGGGGGCAGGCAGGAAGGGAAGGGGGCAGGCAGGAAGGGAGGGGGCAGGCAGGCAGGAAGGGAAGGGGGCAGGCAGGAAGGGAGGGGGCAGGCAGGAAGGGAAGGGGGAAGGCAGGAAGGGAAGGGGGAAGGCAGGAAGGGAGGGGAAAGGCAGGAAGGGAAGGGGAAGGCAGGAAGGGAGGGAAGGAGGCAGGAAGGGAGGGGGAAGGCAGGAAGGGAAGGGGGAAGGCAGGAAGGGAGGGGAAAGGCAGGAAGGGAAGGGGAAGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3042:HG2_PB_SVrefine2Falcon1plusDovetail_3228:HG2_PB_SVrefine2PB10Xhap12_10430:HG4_PB_SVrefine2Falcon1Dovetail_8789:HG3_PB_pbsv_14103:HG2_PB_SVrefine2Falcon2Bionano_7207;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3228;NumExactMatchSVs=1;ClusterMaxShiftDist=0.191235;ClusterMaxSizeDiff=0.191235;ClusterMaxEditDist=0.292829;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=549;DistBack=-393;DistForward=49;DistMin=-393;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=249;REFWIDENED=13:110907891-110908139;PctSeqSimilarity=0.9646;PctSizeSimilarity=0.9821;PctRecOverlap=0.6941;SizeDiff=-10;StartDistance=-166;EndDistance=-166;GTMatch=1;TruScore=88;MatchId=1562.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:53:1/1:4:25:3:18:./.:32:143:13:29:./.:8:1:0/1:7:13:.:.:.
chr13	111131743	HG4_Ill_GATKHCSBGrefine_9952	C	CGGGGAGAAGGCTGGGACTGGAATGTGGGGTGCTCTCTAGGAAAGGGGGACCACCCCAGCAGAGGCAGGCCAGCG	20	PASS	ClusterIDs=HG4_PB_HySA_21048:HG2_PB_pbsv_14451:HG3_PB_pbsv_14110:HG2_PB_PB10Xdip_8231:HG4_PB_assemblyticsfalcon_7375:HG4_Ill_Krunchall_19987:HG4_Ill_GATKHC_23044:HG4_Ill_GATKHCSBGrefine_9952:HG4_Ill_250bpfermikitraw_19051:HG4_Ill_150bpfermikitraw_18344:HG3_Ill_scalpel_13902:HG3_Ill_Krunchall_19251:HG3_Ill_GATKHC_22955:HG3_Ill_GATKHCSBGrefine_9534:HG3_Ill_250bpfermikitraw_18735:HG3_Ill_150bpfermikitraw_18221:HG2_PB_assemblyticsfalcon_7502:HG2_PB_assemblyticsPBcR_7234:HG2_Ill_manta_4005:HG2_Ill_Krunchall_19649:HG2_Ill_GATKHC_23077:HG2_Ill_GATKHCSBGrefine_9642:HG2_Ill_250bpfermikitraw_19302:HG2_Ill_150bpfermikitraw_18204:HG2_PB_HySA_26360:HG3_PB_assemblyticsfalcon_7465;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18204:HG2_Ill_250bpfermikitraw_19302:HG2_Ill_GATKHCSBGrefine_9642:HG2_Ill_GATKHC_23077:HG2_Ill_Krunchall_19649:HG2_Ill_manta_4005:HG2_PB_assemblyticsPBcR_7234:HG2_PB_assemblyticsfalcon_7502:HG3_Ill_150bpfermikitraw_18221:HG3_Ill_250bpfermikitraw_18735:HG3_Ill_GATKHCSBGrefine_9534:HG3_Ill_GATKHC_22955:HG3_Ill_Krunchall_19251:HG3_Ill_scalpel_13902:HG4_Ill_150bpfermikitraw_18344:HG4_Ill_250bpfermikitraw_19051:HG4_Ill_GATKHCSBGrefine_9952:HG4_Ill_GATKHC_23044:HG4_Ill_Krunchall_19987:HG4_PB_assemblyticsfalcon_7375;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.186667;PBcalls=9;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=3148;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=73;REFWIDENED=13:111131738-111131810;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1563.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:3:18:2:20:1/1:1:7:1:10:1/1:0:32:./.:.:.:.:.:.
chr13	111239420	HG4_PB_SVrefine2Falcon1Dovetail_8797	A	AGGCCAGGTGCGGTGGCTCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAAATCCCTTGAGGTCAGGAGTTCCAGACCAGCCTGTTCATCATGATGAAACCACGCTTCTACTAAAAATACAAAAATTAGCCAGCAGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCATGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCGGTGAGCCGAGATCACGCCACTGCATTCCACCCTGGGTGACAGAGTGAGACTCTGTCTAAAGAAAACAAAACAAAACAAAAAAACTACAAGCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8797:HG2_PB_HySA_26369:HG4_PB_pbsv_14423:HG2_PB_SVrefine2Falcon1plusDovetail_3238;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_8797;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0522273;ClusterMaxSizeDiff=0.046083;ClusterMaxEditDist=0.230415;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=318;DistBack=38895;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=643;REFWIDENED=13:111239421-111240063;PctSeqSimilarity=0.9623;PctSizeSimilarity=0.9906;PctRecOverlap=0.2853;SizeDiff=3;StartDistance=-226;EndDistance=-226;GTMatch=0;TruScore=74;MatchId=1564.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:25:./.:8:17:21:2:1/1:0:7:0:5:0/1:3:13:./.:2:6:.:.:.
chr13	111258686	HG3_PB_SVrefine2Falcon1Dovetail_8747	GAC	CCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGGGGGGCTGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6815:HG3_PB_assemblyticsfalcon_7469:HG3_PB_SVrefine2Falcon1Dovetail_8747:HG4_PB_assemblyticsfalcon_7379:HG4_PB_SVrefine2Falcon1Dovetail_8798:HG2_PB_SVrefine2Falcon1plusDovetail_3239:HG2_PB_assemblyticsfalcon_7506:HG2_PB_pbsv_14454:HG3_PB_pbsv_14113;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8747:HG3_PB_assemblyticsfalcon_7469;NumExactMatchSVs=2;ClusterMaxShiftDist=0.103586;ClusterMaxSizeDiff=0.103586;ClusterMaxEditDist=0.204322;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=247;DistBack=-7;DistForward=41355;DistMin=-7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=440;REFWIDENED=13:111258525-111258964;PctSeqSimilarity=0.9809;PctSizeSimilarity=0.9724;PctRecOverlap=0.4392;SizeDiff=-7;StartDistance=139;EndDistance=141;GTMatch=0;TruScore=79;MatchId=1565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:19:./.:12:9:14:11:0/0:16:0:6:0:0/1:28:5:./.:.:.:.:.:.
chr13	111300044	HG3_Ill_250bpfermikitraw_18738	G	GAGGGAGGAGCAGTCCCCAGACCTGGCTTTAGAGTCTGTGGGTGTTTCTTAGGCCATCTGGATGAGGAGCCCAAAGTGGA	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_9643:HG3_PB_pbsv_14115:HG4_PB_assemblyticsfalcon_7380:HG2_PB_pbsv_14455:HG4_Ill_svaba_18059:HG4_PB_pbsv_14424:HG4_Ill_Krunchall_19989:HG4_Ill_250bpfermikitraw_19054:HG4_Ill_150bpfermikitraw_18347:HG3_Ill_svaba_18178:HG3_Ill_Krunchall_19253:HG3_Ill_250bpfermikitraw_18738:HG3_Ill_150bpfermikitraw_18223:HG2_Ill_svaba_18021:HG2_Ill_Krunchall_19650:HG2_Ill_250bpfermikitraw_19304:HG3_PB_HySA_21780:HG2_PB_HySA_26371:HG4_Ill_GATKHC_23047:HG4_Ill_GATKHCSBGrefine_9953:HG3_Ill_GATKHC_22960:HG3_Ill_GATKHCSBGrefine_9535:HG2_Ill_GATKHC_23079;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19304:HG2_Ill_Krunchall_19650:HG2_Ill_svaba_18021:HG3_Ill_150bpfermikitraw_18223:HG3_Ill_250bpfermikitraw_18738:HG3_Ill_Krunchall_19253:HG3_Ill_svaba_18178:HG4_Ill_150bpfermikitraw_18347:HG4_Ill_250bpfermikitraw_19054:HG4_Ill_Krunchall_19989:HG4_Ill_svaba_18059;NumExactMatchSVs=11;ClusterMaxShiftDist=0.152866;ClusterMaxSizeDiff=0.089172;ClusterMaxEditDist=0.298137;PBcalls=6;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=79;DistBack=41355;DistForward=26722;DistMin=26722;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=83;REFWIDENED=13:111300032-111300114;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:22:0|1:24:1:2:24:1|0:1:21:8:0:0/1:29:24:./.:.:.:.:.:.
chr13	111326767	HG2_PB_SVrefine2PB10Xhap12_10442	A	ACAACCATCTGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCAAGTAGCTGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCAAAGTGCTGGATTACAGCGTGAGCCACCGCCCGG	20	PASS	ClusterIDs=HG2_PB_HySA_26372:HG3_PB_assemblyticsfalcon_7470:HG3_PB_pbsv_14116:HG2_PB_PB10Xdip_8234:HG2_PB_pbsv_14456:HG2_PB_assemblyticsfalcon_7507:HG3_Ill_MetaSV_1486:HG4_Ill_MetaSV_1458:HG2_PB_SVrefine2Falcon2Bionano_7215:HG2_PB_SVrefine2PB10Xhap12_10442:HG3_PB_SVrefine2Falcon1Dovetail_8748;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10442;NumExactMatchSVs=1;ClusterMaxShiftDist=0.156202;ClusterMaxSizeDiff=0.156202;ClusterMaxEditDist=0.22293;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=26722;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:111326768-111326782;PctSeqSimilarity=0.9862;PctSizeSimilarity=0.9727;PctRecOverlap=0.9698;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1567.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:21:1|0:5:25:8:2:./.:0:1:20:0:0/1:39:9:0/1:5:7:.:.:.
chr13	111580888	HG4_Ill_SVrefine2DISCOVARDovetail_10234	A	AATTTTGGCTAATTTATACTTGCACCAACAATGTTTGAGAGTACCTGTTTCCCCACACCCTGGCTAATATTGGGTATTACCCATAGTTTTATGCAAAAATAATTCATTCAACAAGTATTTATTAAGCACCCACCATATGCCACTGTTAATTTGCACTTTAAAAATTGTCAATGAGGCTGCTACCAATGT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8236:HG2_10X_SVrefine210Xhap12_10044:HG2_PB_HySA_26378:HG4_PB_pbsv_14428:HG2_PB_pbsv_14460:HG3_PB_HySA_21785:HG4_PB_HySA_21060:HG3_PB_assemblyticsfalcon_7478:HG3_PB_SVrefine2Falcon1Dovetail_8753:HG4_PB_SVrefine2PBcRDovetail_7201:HG4_PB_SVrefine2Falcon1Dovetail_8801:HG4_Ill_SVrefine2DISCOVARDovetail_10234:HG3_PB_SVrefine2PBcRDovetail_6818:HG3_Ill_SVrefine2DISCOVARDovetail_10358:HG3_Ill_MetaSV_1488:HG2_PB_SVrefine2PBcRplusDovetail_3053:HG2_PB_SVrefine2PB10Xhap12_10445:HG2_PB_SVrefine2Falcon2Bionano_7218:HG2_PB_SVrefine2Falcon1plusDovetail_3242:HG2_Ill_SVrefine2DISCOVARplusDovetail_3585;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3585:HG2_PB_SVrefine2Falcon1plusDovetail_3242:HG2_PB_SVrefine2Falcon2Bionano_7218:HG2_PB_SVrefine2PB10Xhap12_10445:HG2_PB_SVrefine2PBcRplusDovetail_3053:HG3_Ill_MetaSV_1488:HG3_Ill_SVrefine2DISCOVARDovetail_10358:HG3_PB_SVrefine2PBcRDovetail_6818:HG4_Ill_SVrefine2DISCOVARDovetail_10234:HG4_PB_SVrefine2Falcon1Dovetail_8801:HG4_PB_SVrefine2PBcRDovetail_7201;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0721649;ClusterMaxSizeDiff=0.0721649;ClusterMaxEditDist=0.185;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=188;DistBack=21459;DistForward=75;DistMin=75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=192;REFWIDENED=13:111580889-111581080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:1:15:0:8:1/1:1:29:1:19:1/1:2:25:./.:.:.:.:.:.
chr13	111590550	HG3_PB_SVrefine2PBcRDovetail_6819	A	GGTGAAGGCAGAGCCTGTTGAAGTCGTAGCCCCAAGAGGGAAGTCAGGAGCTGTGCTCTCCAAAAAAAGCAAGGGCCAGGTCAAGGAGGAAGGTATCAACAAATCTGAAAAGAGAATGAAATTAACTCTTAAAGGAGGAGCAGCTGTGGATCCTGACTCTGGTCTGGAACACTCTGCGCATGTCCTGGAGAAAG	20	PASS	ClusterIDs=HG2_PB_HySA_26379:HG3_PB_assemblyticsfalcon_7479:HG2_Ill_250bpfermikitraw_19307:HG2_PB_PB10Xdip_8237:HG3_PB_HySA_21786:HG4_PB_pbsv_14429:HG4_PB_SVrefine2PBcRDovetail_7202:HG3_PB_pbsv_14122:HG4_PB_SVrefine2Falcon1Dovetail_8802:HG4_Ill_SVrefine2DISCOVARDovetail_10235:HG3_PB_SVrefine2PBcRDovetail_6819:HG3_PB_SVrefine2Falcon1Dovetail_8754:HG3_Ill_SVrefine2DISCOVARDovetail_10359:HG2_PB_SVrefine2PBcRplusDovetail_3054:HG2_PB_SVrefine2PB10Xhap12_10446:HG2_PB_SVrefine2Falcon2Bionano_7219:HG2_Ill_SVrefine2DISCOVARplusDovetail_3586:HG2_10X_SVrefine210Xhap12_10045:HG2_PB_SVrefine2Falcon1plusDovetail_3243:HG4_PB_HySA_21061;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10045:HG2_Ill_SVrefine2DISCOVARplusDovetail_3586:HG2_PB_SVrefine2Falcon2Bionano_7219:HG2_PB_SVrefine2PB10Xhap12_10446:HG2_PB_SVrefine2PBcRplusDovetail_3054:HG3_Ill_SVrefine2DISCOVARDovetail_10359:HG3_PB_SVrefine2Falcon1Dovetail_8754:HG3_PB_SVrefine2PBcRDovetail_6819:HG4_Ill_SVrefine2DISCOVARDovetail_10235:HG4_PB_SVrefine2Falcon1Dovetail_8802:HG4_PB_SVrefine2PBcRDovetail_7202;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0460358;ClusterMaxSizeDiff=0.0460358;ClusterMaxEditDist=0.241206;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=193;DistBack=0;DistForward=30;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=196;REFWIDENED=13:111590551-111590746;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9896;PctRecOverlap=0.1036;SizeDiff=2;StartDistance=-172;EndDistance=-172;GTMatch=0;TruScore=69;MatchId=1569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:0:14:1:7:1/1:0:14:0:16:1/1:0:25:./.:.:.:.:.:.
chr13	111611740	HG2_PB_SVrefine2Falcon1plusDovetail_3244	T	TAAAAGTGATGGGTCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAAATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_21062:HG4_PB_pbsv_14430:HG2_PB_pbsv_14462:HG4_Ill_SVrefine2DISCOVARDovetail_10236:HG4_PB_SVrefine2PBcRDovetail_7203:HG2_PB_SVrefine2Falcon1plusDovetail_3244:HG3_PB_SVrefine2Falcon1Dovetail_8755:HG2_PB_HySA_26380:HG4_PB_SVrefine2Falcon1Dovetail_8803;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3244:HG4_PB_SVrefine2PBcRDovetail_7203;NumExactMatchSVs=2;ClusterMaxShiftDist=0.132;ClusterMaxSizeDiff=0.12;ClusterMaxEditDist=0.244;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=254;DistBack=20994;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=233;REFWIDENED=13:111611741-111611973;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1570.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:39:1|0:7:27:29:2:1|0:0:13:28:0:0/1:25:9:./.:.:.:.:.:.
chr13	112087160	HG3_PB_SVrefine2Falcon1Dovetail_8765	G	GTGTATGGATGAATGGATGGATGGGTGGGTGGATATGTGGATGAATGGGTAAGTGGGTGGGTGAAACGGATGGAGATGTGGATAAATGGATGGATGGATAGATGGGTGGATGGATGAGTGGGTAGATGTATGTATGGATGGATGGATGAGTGGTAGGTGGATGTGTGTATAGATGGATGCATTGATGAGTGGATAGATGGATGGGTGGGTGAATGTATATATGGATGGATGGATTGATGAGTGGATAGATGGATGGGTGGATGAATGCATGAGTGAGTGGGTAGGTGGGTGGATGTAGGAATGCATGGGTGGATAGGTGGATGTGTAGATGGATGGATGAATAGGTGGGTGGATGTGTGAATGGATGGATGGGTAAGTGGGTGGGTGGGTGGGTGGATGGATGGATGGATGGATGGATGTGTGAATGGGTGCGTGGATGAGTGGATGAATAGATGGATAGATGGATGAGTGGGTAGGTGGGTGGATGTGTGGATGTAGGAATGCGTTGGGTGGGTAGGTGGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8765:HG4_PB_SVrefine2Falcon1Dovetail_8809:HG3_Ill_MetaSV_1491:HG2_Ill_GATKHCSBGrefine_9661:HG4_PB_pbsv_14440:HG4_PB_HySA_21077:HG2_PB_pbsv_14475:HG3_PB_pbsv_14136:HG2_PB_PB10Xdip_8257:HG3_Ill_GATKHCSBGrefine_9548:HG2_Ill_GATKHCSBGrefine_9660:HG4_PB_SVrefine2PBcRDovetail_7209:HG2_PB_SVrefine2Falcon1plusDovetail_3252:HG2_PB_SVrefine2Falcon2Bionano_7225:HG2_PB_SVrefine2PBcRplusDovetail_3063:HG2_PB_SVrefine2PB10Xhap12_10453:HG2_Ill_SVrefine2DISCOVARplusDovetail_3594:HG3_Ill_SVrefine2DISCOVARDovetail_10368:HG4_Ill_SVrefine2DISCOVARDovetail_10243:HG3_PB_SVrefine2PBcRDovetail_6831;NumClusterSVs=20;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8765:HG4_PB_SVrefine2PBcRDovetail_7209:HG4_Ill_SVrefine2DISCOVARDovetail_10243:HG3_PB_SVrefine2PBcRDovetail_6831;NumExactMatchSVs=4;ClusterMaxShiftDist=0.149132;ClusterMaxSizeDiff=0.149132;ClusterMaxEditDist=0.263106;PBcalls=13;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=521;DistBack=4640;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6493;REFWIDENED=13:112087161-112077355;PctSeqSimilarity=0.9501;PctSizeSimilarity=0.9827;PctRecOverlap=0.3704;SizeDiff=9;StartDistance=-324;EndDistance=-324;GTMatch=0;TruScore=76;MatchId=1572.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:0:19:1:21:./.:60:518:33:391:./.:0:7:./.:3:26:.:.:.
chr13	112198372	HG2_PB_SVrefine2Falcon1plusDovetail_3254	G	GTGAGTGTTAACTGAGCACTTTCTGTATGCCTGGCTTCCTTTCCGTGACTGTTAACTGAGCGCTTTCTGTAGGCCTGGCTTCCTTTCCGTGACTGTTAACTGAGCGCTTTCTGTATGTCTGGCTTCCTTTCCGTGAGTGTTAACTGAGCACTTTCTGTATGCCTGGCTTCCTTTCCC	10	PASS	ClusterIDs=HG2_PB_pbsv_14477:HG2_PB_SVrefine2PB10Xhap12_10455:HG2_PB_SVrefine2Falcon1plusDovetail_3254:HG2_PB_PB10Xdip_8262:HG3_PB_pbsv_14139;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3254:HG2_PB_SVrefine2PB10Xhap12_10455;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0552486;ClusterMaxSizeDiff=0.0552486;ClusterMaxEditDist=0.196721;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=176;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=676;REFWIDENED=13:112197757-112198432;PctSeqSimilarity=0.9812;PctSizeSimilarity=1;PctRecOverlap=0.3503;SizeDiff=0;StartDistance=115;EndDistance=115;GTMatch=0;TruScore=77;MatchId=1573.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:37:./.:26:10:0:26:./.:4:9:3:10:0/1:5:7:./.:.:.:.:.:.
chr13	112220218	HG2_PB_SVrefine2Falcon2Bionano_7227	C	CCCCCCACGCTGCCCTCGGAGTGTCTTTCAACACACACTGGACCTTGTCGCCCCCACGCTGCCCTCGGAGTATCTTTCAATACACACTGGACCTTGTCACTGCCACGCTGCCCTCAGAGTATCTTTCAACACACACTGGACCTTGTCACCCCCACGCTGTCCTCAGAGTATCTTTCAACACACTGGACCTTGTTGCCCCCCATGCTGTTCTTGGAGTATCTTTCAACACACATTGGACCTTGTCACCCCCAATGCTGCCCTTGGAGTATCTTTCAATACACTGGACCTTGTCACCCCCACGCTGTCCTTGGAGTATCTTTCAACACACATTGGACCTTGTCACCCCTAATGCTGCCCTCGGAGTATCTTTCAACACACTGGACCTTGTCGCCCCCCACGCTGTCCTTGGAGTATCTTTCAACACACATTGGACCTTGTCACCCCCACGCTGCCCTCGGAGTATCTTTCAATACACTGGACCTTGTCACCCCCAATGCTGCCCTCGGAGTATCTTTCAATACACACTGGACCTTGTCGCCCCCCACGCTGCCCTCAGAGTATCTTTCAATACACACTGGACCTTGTTGCCCCCCACGCTGCCCTCGGAGTATCTTTCAACACACTGGACCTTGTCGCCCCCATGCTGCCCTCAGAGTATCTTTCAACACACTGGACCTTGTCACCCCCCACACTGTCCTCGGAGTATCTTTCAATACACACTGGACCTTGTCACCCCCCATGCTGTCCTCAGAGTATCTTTCAACACACTGGACCTTGTCGCTCCCACACTGTCCTCGGAGTATCTTTCAACACACACTGGACCTTGTCACCCCCCACGCTGTCCTCGGAGTATCTTTCAACACATTGGACCTTGTCACCCCCATGCTGTCCCCGGAGTATCTTTCAACACACTGGACCTTGTTGCCCCCCACGCTGTTCTTGGAGTATCTTTCAACACACTGGACCTTGTCA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8768:HG2_PB_SVrefine2Falcon1plusDovetail_3256:HG3_PB_pbsv_14141:HG2_PB_PB10Xdip_8263:HG4_PB_pbsv_14445:HG2_PB_pbsv_14478:HG3_PB_HySA_21809:HG2_PB_HySA_26411:HG4_PB_HySA_21079:HG2_PB_SVrefine2Falcon1plusDovetail_3255:HG4_PB_SVrefine2PBcRDovetail_7212:HG2_PB_SVrefine2PBcRplusDovetail_3065:HG2_PB_SVrefine2PB10Xhap12_10456:HG2_PB_SVrefine2Falcon2Bionano_7227:HG3_PB_SVrefine2PBcRDovetail_6834:HG4_PB_SVrefine2Falcon1Dovetail_8813;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7227:HG2_PB_SVrefine2PB10Xhap12_10456:HG2_PB_SVrefine2PBcRplusDovetail_3065:HG4_PB_SVrefine2PBcRDovetail_7212;NumExactMatchSVs=4;ClusterMaxShiftDist=0.180328;ClusterMaxSizeDiff=0.179235;ClusterMaxEditDist=0.314754;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=971;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=209;REFWIDENED=13:112220219-112220427;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.9979;PctRecOverlap=0.8301;SizeDiff=2;StartDistance=-164;EndDistance=-164;GTMatch=0;TruScore=94;MatchId=1575.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:95:1/1:0:13:1:8:1/1:1:33:0:17:./.:0:6:./.:13:129:.:1572:.
chr13	112263393	HG3_Ill_Krunchall_19269	G	GGTCCTGTCTACACTGGACGATGGGACTCTGGGCCTCCAGAAGGCGGTGACTGCA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_18222:HG2_PB_PB10Xdip_8264:HG2_PB_pbsv_14479:HG3_PB_HySA_21810:HG2_PB_HySA_26412:HG4_Ill_GATKHC_23070:HG4_Ill_GATKHCSBGrefine_9969:HG3_Ill_GATKHC_22985:HG3_Ill_GATKHCSBGrefine_9553:HG2_Ill_GATKHC_23106:HG2_Ill_GATKHCSBGrefine_9663:HG3_Ill_manta_3269:HG3_Ill_Spiral_15027:HG2_Ill_manta_4009:HG3_PB_assemblyticsfalcon_7500:HG2_PB_assemblyticsPBcR_7264:HG4_PB_HySA_21081:HG4_Ill_Krunchall_20000:HG4_Ill_250bpfermikitraw_19063:HG3_Ill_Krunchall_19269:HG3_Ill_250bpfermikitraw_18759:HG3_Ill_150bpfermikitraw_18237:HG2_Ill_Krunchall_19665:HG2_Ill_250bpfermikitraw_19326;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18222:HG4_Ill_Krunchall_20000:HG4_Ill_250bpfermikitraw_19063:HG3_Ill_Krunchall_19269:HG3_Ill_250bpfermikitraw_18759:HG3_Ill_150bpfermikitraw_18237:HG2_Ill_Krunchall_19665:HG2_Ill_250bpfermikitraw_19326;NumExactMatchSVs=8;ClusterMaxShiftDist=0.188679;ClusterMaxSizeDiff=0.150943;ClusterMaxEditDist=0.283019;PBcalls=7;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=926;DistForward=36;DistMin=36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=37;REFWIDENED=13:112263392-112263431;PctSeqSimilarity=0.9892;PctSizeSimilarity=0.9815;PctRecOverlap=0.2909;SizeDiff=1;StartDistance=-38;EndDistance=-38;GTMatch=0;TruScore=75;MatchId=1576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:./.:4:49:0:3:./.:1:11:0:4:1/1:1:38:./.:.:.:.:1572:.
chr13	112273825	HG2_PB_SVrefine2PB10Xhap12_10457	G	GTGGTATGTGTGGTGTGTGTGTGTCTGTGTGGTGTGTGTCTCTGTGGTGTGTGTGTGTGGTATATGTACATGGGGTGTGGGCGGGCGTGTGTGTGTGGTGTGTGTCTGTGGTGTGTGTATTGGTGTGGTGTGTGTGTCTGTGGTGTGTGTGGTATGTGTCTGTATGGTATGTGTATGTGTGGTATATGTGTGTGGTGTGTGTCTGGTGTGTGTGTGGTGTGTGTCTGTGGTATGTGTGTGTGTTGTGTGTGGGTGTGTGTGTTGTGTGTGGTTTGTGTGTCTGTGGTGTGTGTGGTGTGTGGGTGTGTCTGTGGTGTGTGTGTGGTGTGTGTGTGGTATGTGTCTGGTAAGTGTATGTGTGGTGCATGTGTGTGGTGTGTGTGTGGTGTGTTTGGTGTGTGTGTGGTGTGTGTGGGTGTGTCTGTGGTGTGTCTGGTGTGTGTGGTGTGTGTGTCTGTGGTGTGTGTGGTATGTGTCTGTGTGGTAAGTGTGTGTGTGGTGTGTGTGGGTGTGTGTGGTGTGTGTGTCTGGTGTATGTGGTGTGTTGTGTGTGTGTCTGTGGTGTGTGTGATGTGTGTGTGTCTGTGGTGTGTGTGGTGTGTGTGTGTGGTATGTGGTATGTGTCTGTGTGGTAAGTGTATGCATGGTGCGTGAGTGTGATGTGTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3066:HG3_PB_pbsv_14143:HG2_PB_PB10Xdip_8265:HG4_PB_pbsv_14447:HG4_Ill_MetaSV_1464:HG2_PB_HySA_26413:HG2_PB_pbsv_14480:HG2_PB_SVrefine2Falcon1plusDovetail_3257:HG4_PB_SVrefine2PBcRDovetail_7213:HG3_PB_SVrefine2PBcRDovetail_6835:HG2_PB_SVrefine2PB10Xhap12_10457:HG3_PB_SVrefine2Falcon1Dovetail_8769:HG2_PB_SVrefine2Falcon2Bionano_7228:HG4_PB_SVrefine2Falcon1Dovetail_8814;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10457:HG3_PB_SVrefine2PBcRDovetail_6835;NumExactMatchSVs=2;ClusterMaxShiftDist=0.101545;ClusterMaxSizeDiff=0.101545;ClusterMaxEditDist=0.231863;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=665;DistBack=4302;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=455;REFWIDENED=13:112273826-112274280;PctSeqSimilarity=0.9838;PctSizeSimilarity=0.997;PctRecOverlap=0.7925;SizeDiff=2;StartDistance=-137;EndDistance=-137;GTMatch=0;TruScore=92;MatchId=1577.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:56:1/1:7:23:0:18:./.:53:142:48:81:./.:0:0:1/1:2:149:.:.:.
chr13	112511895	HG4_PB_SVrefine2Falcon1Dovetail_8816	T	TGGGGAACGGGGAACCTCTCTGGTGGTCGTTAGGAGGCGGGGGGATGTCTCTGGTGGTCCTTAGGGGATGGGGGGACGTCTCTGGTGGGCGTTAGGGGACAGGGAACAGGGGACATCTCTGGTAGTCGTTAGGGGATGGGGGATGTCTATGGCGGGTGTTGGGGGATGGGGGGATGTATCTGGCAGTTATTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3260:HG3_PB_SVrefine2PBcRDovetail_6837:HG3_PB_pbsv_14146:HG4_PB_HySA_21089:HG4_PB_pbsv_14450:HG2_PB_pbsv_14483:HG3_PB_HySA_21812:HG2_PB_HySA_26416:HG2_PB_PB10Xdip_8267:HG4_PB_SVrefine2PBcRDovetail_7214:HG4_PB_SVrefine2Falcon1Dovetail_8816:HG3_PB_SVrefine2Falcon1Dovetail_8771:HG2_PB_SVrefine2PBcRplusDovetail_3068:HG2_PB_SVrefine2PB10Xhap12_10459:HG2_PB_SVrefine2Falcon2Bionano_7230;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3260:HG4_PB_SVrefine2PBcRDovetail_7214:HG4_PB_SVrefine2Falcon1Dovetail_8816:HG3_PB_SVrefine2Falcon1Dovetail_8771:HG2_PB_SVrefine2PBcRplusDovetail_3068:HG2_PB_SVrefine2PB10Xhap12_10459:HG2_PB_SVrefine2Falcon2Bionano_7230;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0583554;ClusterMaxSizeDiff=0.0477454;ClusterMaxEditDist=0.280519;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=191;DistBack=2800;DistForward=151;DistMin=151;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=284;REFWIDENED=13:112511896-112512179;PctSeqSimilarity=0.9564;PctSizeSimilarity=0.9634;PctRecOverlap=0.1099;SizeDiff=7;StartDistance=-167;EndDistance=-167;GTMatch=0;TruScore=67;MatchId=1579.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:1:16:0:26:./.:0:5:3:9:./.:0:0:./.:.:.:.:.:.
chr13	112733081	HG4_Ill_GATKHC_23086	C	CTGTGTGCTGTGTGTTGTGTTGTACTGTGTTGTGTTGTGCTGTGCCGTGTGTTGTGCTGTGCTGTGTTGTGTTGTGCTGTGTGTTATAT	20	PASS	ClusterIDs=HG4_PB_pbsv_14457:HG3_PB_HySA_21825:HG4_PB_HySA_21097:HG2_PB_pbsv_14489:HG2_Ill_breakscan11_4537:HG2_PB_PB10Xdip_8275:HG4_Ill_manta_3413:HG4_Ill_Krunchall_20010:HG4_Ill_GATKHC_23086:HG4_Ill_GATKHCSBGrefine_9976:HG4_Ill_250bpfermikitraw_19075:HG4_Ill_150bpfermikitraw_18369:HG3_Ill_scalpel_13924:HG3_Ill_Spiral_15033:HG3_Ill_GATKHC_22993:HG3_Ill_GATKHCSBGrefine_9561:HG3_Ill_250bpfermikitraw_18766:HG3_Ill_150bpfermikitraw_18242:HG2_Ill_scalpel_13669:HG2_Ill_manta_4012:HG2_Ill_SpiralSDKrefine_4690:HG2_Ill_GATKHC_23121:HG2_Ill_GATKHCSBGrefine_9671:HG2_Ill_250bpfermikitraw_19337:HG2_Ill_150bpfermikitraw_18232:HG2_PB_HySA_26434;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18232:HG2_Ill_250bpfermikitraw_19337:HG2_Ill_GATKHCSBGrefine_9671:HG2_Ill_GATKHC_23121:HG2_Ill_SpiralSDKrefine_4690:HG2_Ill_manta_4012:HG2_Ill_scalpel_13669:HG3_Ill_150bpfermikitraw_18242:HG3_Ill_250bpfermikitraw_18766:HG3_Ill_GATKHCSBGrefine_9561:HG3_Ill_GATKHC_22993:HG3_Ill_Spiral_15033:HG3_Ill_scalpel_13924:HG4_Ill_150bpfermikitraw_18369:HG4_Ill_250bpfermikitraw_19075:HG4_Ill_GATKHCSBGrefine_9976:HG4_Ill_GATKHC_23086:HG4_Ill_Krunchall_20010:HG4_Ill_manta_3413;NumExactMatchSVs=19;ClusterMaxShiftDist=0.108108;ClusterMaxSizeDiff=0.0972973;ClusterMaxEditDist=0.276596;PBcalls=6;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=564;REFWIDENED=13:112732923-112733486;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1580.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:47:1/1:3:21:1:4:./.:9:111:3:74:1/1:0:18:./.:.:.:.:.:.
chr13	112996019	HG2_PB_SVrefine2Falcon1plusDovetail_3267	C	CTCTCTCTCCCCCTTCCTCTCTCTCTCTCTCTCTCCCCGACTCTCTCCCTCACTCTTCCCCTCTCTCTCTCCCCTCTATCTCTCTCTCCCCCTCTCCCTCTCCCTCTCTCTCTCCCTCTCTCTCTCCCCCTCTCTCTCTCTCTCTGTCCCTCTTTCCCTCTCTCTCTCTCCCTGACTCTCTCCCTCACTCTTCCCCTCTCTCTCTCCCCCTCTCTCTCTCTCTCCCCCTCTTTCTCCCTCTCTCTCCTCTCTCCCTCTCTCTCTCTCCCTCTCTCTCCCTCTGTCTCTCTCCCTCTCTCCCTCTCCCTCTCTCTCCCTCTCTCTCCATCTCTCTCCCTCTGTCTCTCTCCCTCTCTCTCCCTCCCTCTCCCTCCCTCTCTCTCCCTCTCTATCTCTCTCCCTCTGTCTCTCTCCCTCTCCCAGTCTCTCTCTCTCCCTCTTTCTCTCTGCCTCTGTCTCTCCCTCTCTCCCTCCTCTCCCTCCCTCTCCCTCCCTCTCTCTCCCTCTCTCTCCCTCTGCCTGTCTCTCCCTCCCTCTCTCTCCCTCTCTCCCTCTCTCTCTCCCTCCCTCTTTCTCTCTCTCCCTCTCTCTCTCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTTTCCCTCTCCCTCTCCCCCCGCCTCTCTCTCTCTCTTTTCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8825:HG2_PB_assemblyticsfalcon_7571:HG3_PB_pbsv_14161:HG2_PB_SVrefine2Falcon1plusDovetail_3267:HG2_PB_PB10Xdip_8344:HG2_PB_HySA_26441:HG2_PB_pbsv_14502:HG3_PB_SVrefine2PBcRDovetail_6845:HG2_PB_SVrefine2Falcon2Bionano_7238:HG2_PB_SVrefine2PB10Xhap12_10469:HG3_PB_SVrefine2Falcon1Dovetail_8784:HG2_PB_SVrefine2PBcRplusDovetail_3074:HG4_PB_SVrefine2PBcRDovetail_7221;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3267:HG2_PB_assemblyticsfalcon_7571;NumExactMatchSVs=2;ClusterMaxShiftDist=0.169312;ClusterMaxSizeDiff=0.164777;ClusterMaxEditDist=0.220711;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=663;DistBack=164;DistForward=3182;DistMin=164;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=245;REFWIDENED=13:112995775-112996019;PctSeqSimilarity=0.961;PctSizeSimilarity=0.9837;PctRecOverlap=0.7111;SizeDiff=-11;StartDistance=189;EndDistance=189;GTMatch=1;TruScore=88;MatchId=1582.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:1:27:0:12:./.:16:13:17:8:0/0:17:0:0/1:11:79:.:11630:.
chr13	113299670	HG3_PB_SVrefine2PBcRDovetail_6848	A	AGAGGACACCGAGGATGGCGAGGATGGCGAGGATGGTGAGGATGGCGAGGACACTGAGGATGGCGAGGATGGCGAGGACGGCGAGGACGGCGAGGACGGCGAGGATGGCGAGGATGGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3270:HG4_PB_pbsv_14472:HG3_PB_pbsv_14165:HG2_PB_pbsv_14505:HG2_PB_PB10Xdip_8350:HG4_Ill_GATKHC_23108:HG4_Ill_GATKHCSBGrefine_9984:HG3_PB_SVrefine2Falcon1Dovetail_8786:HG3_Ill_GATKHC_23010:HG2_Ill_GATKHC_23137:HG4_PB_HySA_21103:HG3_PB_HySA_21835:HG2_PB_HySA_26444:HG4_PB_SVrefine2PBcRDovetail_7222:HG4_PB_SVrefine2Falcon1Dovetail_8828:HG3_PB_SVrefine2PBcRDovetail_6848:HG2_PB_SVrefine2PB10Xhap12_10473;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3270:HG4_PB_SVrefine2PBcRDovetail_7222:HG4_PB_SVrefine2Falcon1Dovetail_8828:HG3_PB_SVrefine2PBcRDovetail_6848:HG2_PB_SVrefine2PB10Xhap12_10473;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0829876;ClusterMaxSizeDiff=0.0661157;ClusterMaxEditDist=0.128514;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=117;DistBack=1859;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=333;REFWIDENED=13:113299671-113300003;PctSeqSimilarity=0.9921;PctSizeSimilarity=1;PctRecOverlap=0.9231;SizeDiff=0;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=97;MatchId=1584.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:2:24:1:18:./.:2:15:1:16:./.:0:5:./.:.:.:.:.:.
chr13	113368184	HG2_PB_SVrefine2Falcon2Bionano_7241	A	AGCTTCCATTCCTGGCCCCAGCCTCCCTTCCACTCCTCCCACCCCTGATCCCAGCCTCCCTTCCATTCTTCCCACCCCAGATCCCACGCCTCCCTTCCCACCCAGCTTCCATTCCTGGCCCCAGTCTCCCTTCCACTCCCCCCACCCCTGATCCCACACCTCCCTTTCACTCCCCCGACCCCTGATGGCCGTGCCTCCTTTCCACTCCCCCAACCCCTGGTCCCAACCTCCCTTCCGCTCCCCCAACCCCTGATCCCACACCTCCCTTCCACTCCCCCCACCCCTGATGCCATGCCTCCTTTCCACTCCCCCCACCGCTGGTCCCAGCCTCCCTTCCACTCCTCCCACCCGGCTTCCATTCCTGGCCCCAGCCTCCCTTCCACTCCCCCCACCCCTGATCCCACACCTCCCTTCCACTCCCCCCACCCCTGATGCCATGCCTCCCTTCCACTCCCCCCACCGCTGGTCCCAGCCTCCCTTCCACTCCTCCCACCCG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7223:HG3_PB_pbsv_14166:HG2_PB_PB10Xdip_8352:HG3_PB_HySA_21836:HG4_PB_HySA_21104:HG2_PB_HySA_26446:HG4_PB_pbsv_14474:HG2_PB_pbsv_14507:HG2_PB_SVrefine2Falcon1plusDovetail_3272:HG2_PB_SVrefine2PBcRplusDovetail_3078:HG2_PB_SVrefine2Falcon2Bionano_7241:HG2_PB_SVrefine2PB10Xhap12_10475:HG3_PB_SVrefine2PBcRDovetail_6849:HG4_PB_SVrefine2Falcon1Dovetail_8830:HG3_PB_SVrefine2Falcon1Dovetail_8787;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7241:HG2_PB_SVrefine2PBcRplusDovetail_3078;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0399202;ClusterMaxSizeDiff=0.0300903;ClusterMaxEditDist=0.229541;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=495;DistBack=26226;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=282;REFWIDENED=13:113368185-113368466;PctSeqSimilarity=0.9814;PctSizeSimilarity=0.996;PctRecOverlap=0.6404;SizeDiff=2;StartDistance=-177;EndDistance=-177;GTMatch=0;TruScore=87;MatchId=1585.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:44:./.:0:1:0:1:./.:0:0:0:0:1/1:0:11:./.:3:26:.:.:.
chr13	113369638	HG2_PB_SVrefine2Falcon2Bionano_7242	T	TCCTGGCCCATCCCCGGTACCTGGCCAATCCCCTACACCTGGCCCACCTCCCCACACCTGGCCGATCCCCCCACACCTGGCCCACCTCCCCACACCTGGCCGATCCCACCACACCTGGCCCACCTCCCCACACCTGGCCCACCTCCCCACACCTGGCCCACTTCCCCACACCTGGCCCATCCCCCCACACCTGGCCCATCTCCCACA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8831:HG4_PB_HySA_21105:HG2_PB_HySA_26447:HG2_PB_PB10Xdip_8353:HG4_PB_pbsv_14475:HG2_PB_pbsv_14508:HG4_PB_SVrefine2PBcRDovetail_7224:HG2_PB_SVrefine2Falcon1plusDovetail_3273:HG3_PB_SVrefine2PBcRDovetail_6850:HG2_PB_SVrefine2PBcRplusDovetail_3079:HG2_PB_SVrefine2PB10Xhap12_10476:HG2_PB_SVrefine2Falcon2Bionano_7242:HG3_PB_SVrefine2Falcon1Dovetail_8788:HG3_PB_pbsv_14167;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7242:HG2_PB_SVrefine2PB10Xhap12_10476:HG2_PB_SVrefine2PBcRplusDovetail_3079:HG3_PB_SVrefine2PBcRDovetail_6850;NumExactMatchSVs=4;ClusterMaxShiftDist=0.152709;ClusterMaxSizeDiff=0.147783;ClusterMaxEditDist=0.231527;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=206;DistBack=1276;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=198;REFWIDENED=13:113369639-113369836;PctSeqSimilarity=0.9777;PctSizeSimilarity=0.9904;PctRecOverlap=0.5933;SizeDiff=-2;StartDistance=-84;EndDistance=-84;GTMatch=0;TruScore=85;MatchId=1586.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:32:./.:0:0:1:0:./.:0:0:0:0:1/1:0:10:./.:.:.:.:.:.
chr13	113622030	HG2_PB_SVrefine2Falcon2Bionano_7248	G	GATGTTGCCGGATGCTCTTTTGGACGCTGGAATGCTGGTGCATTGTTGCCGGATGCTGGAATGGTGCACGCACGCTCTGTTGGACGCTGGAATGCTGGTGCATTGTTGCCGGATGCTGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7248:HG4_PB_HySA_21125:HG4_PB_pbsv_14496:HG2_PB_assemblyticsfalcon_7588:HG2_PB_pbsv_14522:HG2_PB_SVrefine2Falcon1plusDovetail_3279:HG4_PB_SVrefine2Falcon1Dovetail_8841;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7248;NumExactMatchSVs=1;ClusterMaxShiftDist=0.126482;ClusterMaxSizeDiff=0.118577;ClusterMaxEditDist=0.280303;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=119;DistBack=3605;DistForward=71;DistMin=71;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=282;REFWIDENED=13:113622031-113622312;PctSeqSimilarity=0.9688;PctSizeSimilarity=0.9917;PctRecOverlap=0.3967;SizeDiff=-1;StartDistance=-72;EndDistance=-72;GTMatch=0;TruScore=78;MatchId=1587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:24:1|0:4:18:32:3:./.:1:0:4:0:./.:18:1:./.:.:.:.:.:.
chr13	113627112	HG3_Ill_GATKHCSBGrefine_9575	T	TGGATGGATGACTGGGTGACTGGATGGATGGGTAGGTGGAGGATGGATGGATGGATGGATAGATGGGTGGGTAGATGGGTGGGTGGATGCATCAATGAGCAGATAGATGGATGAGTGGATGGATGGATGCATAGATGAATGGGTGGATGAATGGGTAGATGGGTAGCTGGATGGATGTGTGGGTGGGTGGATGAGTAGATGTGTGGGTGGGTGAGTGGATGGATGATGATGGATGGATAGATGGATGGGTGGCTGGATGGATGAATGAGTGAGTGGGTGGATGGATGGGTGAGTGAATGGATGGATGATGGATGGATGGAAGGTGGATGGATGAATGGGTAGATAGATAGGTGGATGGATGGATGAGAAGATGAATGGATGTAAGGTAGATGGATGGATGGGTGAGTGGGTGAATAGGTATGTGAACACATGGATGACTAGACAAATGGGTGGGTGGGTGGATGGATGGATGAATAGGTGGGTGGTAGATGGGTGGGTGAGTGGATGGATGCATAAGTGGATGTATGGATGGATGGATGGATGACTTGATGGATGGATGGATGATGATAGATGGGTGGGTGGGTGGGTGGATGGATAGATGGATGTGTGGGTGGATGGACAGAATGACTGGATGGACAGGTGGGTGGATGCATAGATGAATGGATGCATGGATGAGTGGATGGATGGATGGGTAGATGGATGGGTGGGTGGGTAGATAAGTGGATGGATGGATGGATGGATGGATGACCGGATGGATGGATGATGATGGATGGGTGGGTGAGTGGGTGGGTGGATGGATAGATGACTGGATGGATGGATGAATGATGATGGATGAATGGATGGGTAGGTAGATGGATGGATGAATGGATGGGTGGATGTGTAGGTGGATGAGTGATTGGATGTATGGATGAATGGGTGGGTGGGTGGGTGGATGGATGGA	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_10262:HG4_PB_HySA_21126:HG2_PB_pbsv_14523:HG3_PB_pbsv_14183:HG4_Ill_MetaSV_1473:HG4_Ill_GATKHCSBGrefine_9998:HG3_Ill_MetaSV_1500:HG3_Ill_GATKHCSBGrefine_9575:HG2_Ill_MetaSV_1386:HG2_Ill_GATKHCSBGrefine_9689:HG2_PB_HySA_26465:HG2_PB_PB10Xdip_8364:HG2_PB_assemblyticsfalcon_7589:HG2_PB_assemblyticsPBcR_7311:HG3_PB_SVrefine2PBcRDovetail_6857:HG4_PB_SVrefine2Falcon1Dovetail_8843:HG3_PB_SVrefine2Falcon1Dovetail_8796:HG2_PB_SVrefine2PBcRplusDovetail_3088:HG2_PB_SVrefine2PB10Xhap12_10485:HG2_PB_SVrefine2Falcon2Bionano_7249:HG2_PB_SVrefine2Falcon1plusDovetail_3280:HG4_PB_pbsv_14497:HG2_Ill_SVrefine2DISCOVARplusDovetail_3610:HG4_PB_SVrefine2PBcRDovetail_7231:HG4_PB_SVrefine2Falcon1Dovetail_8842:HG3_Ill_SVrefine2DISCOVARDovetail_10381;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9689:HG2_Ill_MetaSV_1386:HG3_Ill_GATKHCSBGrefine_9575:HG3_Ill_MetaSV_1500:HG4_Ill_GATKHCSBGrefine_9998:HG4_Ill_MetaSV_1473;NumExactMatchSVs=6;ClusterMaxShiftDist=0.2116;ClusterMaxSizeDiff=0.2116;ClusterMaxEditDist=0.269103;PBcalls=17;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=939;DistBack=-62;DistForward=2;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=71;REFWIDENED=13:113627104-113627174;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9958;PctRecOverlap=0.9958;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1588.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:1/1:1:23:3:19:1/1:15:446:12:305:1/1:0:26:0/1:14:97:.:1077:.
chr13	113634942	HG2_Ill_svaba_18073	G	GCCGCCTTCCCCTTCCCCCCGCCTTCCCCTTTCCCCCGCCTTCCCCTTTCCCCCGCCTTCCCCTTTCCC	20	PASS	ClusterIDs=HG3_PB_pbsv_14184:HG4_Ill_svaba_18109:HG2_PB_pbsv_14524:HG3_Ill_svaba_18230:HG2_Ill_svaba_18073;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_svaba_18073:HG3_Ill_svaba_18230:HG4_Ill_svaba_18109;NumExactMatchSVs=3;ClusterMaxShiftDist=0.129496;ClusterMaxSizeDiff=0.129496;ClusterMaxEditDist=0.258993;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=7826;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=41;REFWIDENED=13:113634943-113634983;PctSeqSimilarity=0.9928;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:21:./.:27:1:7:15:./.:3:11:3:13:0/1:14:21:./.:.:.:.:.:.
chr13	113734044	HG4_PB_SVrefine2Falcon1Dovetail_8850	C	CGTCCAGGCAGAGGATTGTCCACACGGAGGAGGGTCCAAGCAGAGGGGCGTCTGCACGGAGGAGGGTCCAGGCAGAGGAACGTCCAGGCAAGGGAGGGTCCACACAGAAGAGGGTCCAGGTAGAAGGCTATCCGCACGGAGGAGGGTCCAGGCAGAGGAGTGTCCATACGGAGGAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3286:HG3_PB_HySA_21874:HG2_PB_PB10Xdip_8372:HG2_PB_HySA_26480:HG4_PB_HySA_21138:HG3_PB_pbsv_14193:HG2_PB_pbsv_14533:HG4_PB_SVrefine2PBcRDovetail_7238:HG4_PB_SVrefine2Falcon1Dovetail_8850:HG3_PB_SVrefine2PBcRDovetail_6862:HG2_PB_SVrefine2PBcRplusDovetail_3094:HG2_PB_SVrefine2PB10Xhap12_10492:HG2_PB_SVrefine2Falcon2Bionano_7257;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3286:HG4_PB_SVrefine2PBcRDovetail_7238:HG4_PB_SVrefine2Falcon1Dovetail_8850:HG3_PB_SVrefine2PBcRDovetail_6862:HG2_PB_SVrefine2PBcRplusDovetail_3094:HG2_PB_SVrefine2PB10Xhap12_10492:HG2_PB_SVrefine2Falcon2Bionano_7257;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0718232;ClusterMaxSizeDiff=0.0552486;ClusterMaxEditDist=0.169399;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=176;DistBack=1510;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=596;REFWIDENED=13:113734045-113734640;PctSeqSimilarity=0.9751;PctSizeSimilarity=1;PctRecOverlap=0.6384;SizeDiff=0;StartDistance=-64;EndDistance=-64;GTMatch=0;TruScore=87;MatchId=1591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:75:./.:2:77:2:0:1/1:1:7:0:16:1/1:0:13:./.:.:.:.:.:.
chr13	113743521	HG2_PB_SVrefine2Falcon2Bionano_7259	T	TTCAGAGCAAGTAGGGTGGGCGTCTGTTCTCATCCAGCCCGTCCGGGTTTAACTTAGAAGTGTGTGGCCCC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3614:HG2_PB_HySA_26481:HG2_PB_PB10Xdip_8373:HG4_PB_pbsv_14509:HG2_PB_pbsv_14535:HG3_PB_pbsv_14195:HG3_PB_assemblyticsfalcon_7589:HG3_PB_HySA_21875:HG4_PB_SVrefine2Falcon1Dovetail_8851:HG3_PB_SVrefine2PBcRDovetail_6864:HG3_Ill_SVrefine2DISCOVARDovetail_10384:HG2_PB_SVrefine2PBcRplusDovetail_3096:HG2_PB_SVrefine2PB10Xhap12_10494:HG2_PB_SVrefine2Falcon2Bionano_7259:HG2_PB_SVrefine2Falcon1plusDovetail_3288;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3614:HG4_PB_SVrefine2Falcon1Dovetail_8851:HG3_PB_SVrefine2PBcRDovetail_6864:HG3_Ill_SVrefine2DISCOVARDovetail_10384:HG2_PB_SVrefine2PBcRplusDovetail_3096:HG2_PB_SVrefine2PB10Xhap12_10494:HG2_PB_SVrefine2Falcon2Bionano_7259:HG2_PB_SVrefine2Falcon1plusDovetail_3288;NumExactMatchSVs=8;ClusterMaxShiftDist=0.108108;ClusterMaxSizeDiff=0.108108;ClusterMaxEditDist=0.251748;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=3382;DistForward=106;DistMin=106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=268;REFWIDENED=13:113743522-113743789;PctSeqSimilarity=0.9769;PctSizeSimilarity=1;PctRecOverlap=0.4789;SizeDiff=0;StartDistance=-37;EndDistance=-37;GTMatch=0;TruScore=81;MatchId=1592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:1/1:3:41:1:23:./.:2:0:3:1:0/0:9:0:./.:.:.:.:.:.
chr13	113917459	HG3_PB_HySA_21887	G	GGCAGAATGTCGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGATCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGGGTCTGCCTCGCTTATACGTGCCCTTGCTGATGGCAGATGTCGGGTCTGCCTCGCTTATACGTGCCCTTACTGAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3296:HG2_PB_pbsv_14545:HG4_PB_pbsv_14518:HG3_PB_HySA_21887:HG3_PB_pbsv_14204:HG2_PB_PB10Xdip_8389:HG4_PB_HySA_21162:HG4_PB_SVrefine2Falcon1Dovetail_8857:HG2_PB_SVrefine2Falcon2Bionano_7267:HG2_PB_SVrefine2PBcRplusDovetail_3104:HG3_PB_SVrefine2Falcon1Dovetail_8806:HG2_PB_SVrefine2PB10Xhap12_10504;NumClusterSVs=12;ExactMatchIDs=HG3_PB_HySA_21887;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0924949;ClusterMaxSizeDiff=0.0916836;ClusterMaxEditDist=0.251698;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1178;DistBack=76;DistForward=38497;DistMin=76;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=430;REFWIDENED=13:113917080-113917509;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9992;PctRecOverlap=0.9941;SizeDiff=1;StartDistance=6;EndDistance=6;GTMatch=1;TruScore=99;MatchId=1593.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:84:1/1:1:22:2:11:1/1:0:14:0:12:1/1:0:30:0/1:14:48:.:1343:.
chr13	113986696	HG2_Ill_SpiralSDKrefine_4718	C	CGTGCACACGCACGCCACACAGGTACACACGTGCACACGCACGCCACACGT	20	PASS	ClusterIDs=HG4_PB_HySA_21166:HG4_Ill_scalpel_13382:HG2_PB_PB10Xdip_8390:HG4_Ill_Krunchall_20035:HG4_Ill_GATKHC_23146:HG4_Ill_250bpfermikitraw_19104:HG4_Ill_150bpfermikitraw_18398:HG3_Ill_scalpel_13948:HG3_Ill_Spiral_15063:HG3_Ill_Krunchall_19301:HG3_Ill_GATKHC_23039:HG3_Ill_250bpfermikitraw_18798:HG3_Ill_150bpfermikitraw_18279:HG2_Ill_scalpel_13694:HG2_Ill_SpiralSDKrefine_4718:HG2_Ill_GATKHC_23166:HG2_Ill_250bpfermikitraw_19372:HG2_Ill_150bpfermikitraw_18259:HG3_PB_HySA_21892:HG3_PB_assemblyticsfalcon_7608:HG2_PB_assemblyticsPBcR_7334:HG2_PB_assemblyticsfalcon_7611:HG4_PB_HySA_21167;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18259:HG2_Ill_250bpfermikitraw_19372:HG2_Ill_GATKHC_23166:HG2_Ill_SpiralSDKrefine_4718:HG2_Ill_scalpel_13694:HG3_Ill_150bpfermikitraw_18279:HG3_Ill_250bpfermikitraw_18798:HG3_Ill_GATKHC_23039:HG3_Ill_Krunchall_19301:HG3_Ill_Spiral_15063:HG3_Ill_scalpel_13948:HG4_Ill_150bpfermikitraw_18398:HG4_Ill_250bpfermikitraw_19104:HG4_Ill_GATKHC_23146:HG4_Ill_Krunchall_20035:HG4_Ill_scalpel_13382;NumExactMatchSVs=16;ClusterMaxShiftDist=0.252427;ClusterMaxSizeDiff=0.252427;ClusterMaxEditDist=0.291262;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=13;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=215;REFWIDENED=13:113986538-113986752;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1594.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:47:1/1:2:12:5:38:./.:1:21:3:25:0/1:3:25:./.:.:.:.:.:.
chr13	114011355	HG2_PB_SVrefine2PBcRplusDovetail_3106	A	AGTGGCTCATGCCTGGAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCTGCCTCTACTAAAAATACAAAAATTAGCTGGACGTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10096:HG4_PB_SVrefine2Falcon1Dovetail_8860:HG4_PB_HySA_21172:HG3_PB_HySA_21898:HG2_PB_pbsv_14552:HG3_PB_SVrefine2PBcRDovetail_6868:HG4_PB_pbsv_14526:HG2_PB_PB10Xdip_8403:HG3_PB_SVrefine2Falcon1Dovetail_8812:HG2_Ill_GATKHC_23171:HG3_PB_pbsv_14210:HG4_Ill_GATKHC_23150:HG4_Ill_GATKHCSBGrefine_10010:HG3_Ill_GATKHC_23044:HG3_Ill_GATKHCSBGrefine_9582:HG3_PB_SVrefine2Falcon1Dovetail_8811:HG2_PB_SVrefine2Falcon2Bionano_7269:HG2_Ill_SVrefine2DISCOVARplusDovetail_3621:HG2_PB_SVrefine2Falcon1plusDovetail_3300:HG4_PB_SVrefine2PBcRDovetail_7248:HG4_Ill_SVrefine2DISCOVARDovetail_10273:HG2_PB_SVrefine2PBcRplusDovetail_3106:HG2_PB_SVrefine2PB10Xhap12_10508;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10096:HG4_PB_SVrefine2PBcRDovetail_7248:HG4_Ill_SVrefine2DISCOVARDovetail_10273:HG2_PB_SVrefine2PBcRplusDovetail_3106:HG2_PB_SVrefine2PB10Xhap12_10508;NumExactMatchSVs=5;ClusterMaxShiftDist=0.162963;ClusterMaxSizeDiff=0.162963;ClusterMaxEditDist=0.398551;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=133;DistBack=3996;DistForward=250;DistMin=250;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=292;REFWIDENED=13:114011356-114011647;PctSeqSimilarity=0.9933;PctSizeSimilarity=1;PctRecOverlap=0.8872;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=96;MatchId=1596.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:46:1/1:4:21:3:22:./.:2:22:1:20:1/1:1:34:./.:.:.:.:.:.
chr13	114058175	HG2_PB_SVrefine2PBcRplusDovetail_3109	C	CCTGTTCCCGACCCTGTTCCCAAGCCCGTTCCTGAGCCCCTTTCTGGGTCTGCCTCTGAGTCTCTATCTGGGTCTGCTCCCAGCCCTGATCCCGAGCCCGATCCCGAGCCCATTCCTGAGCCCCTTTCTGGGCCTGACCCTGAGCCTCTATGTGGGTCTGCTCCCGACCCTGTTCCTGAGCCCGTTCCTGAGCCCCTTTCTGGGCCTGTTCCCGAGCCCGTTCCTGAGCCCCTTTCTGGGCCTGACCCTGAGCCTCTATGTGGGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7273:HG3_PB_pbsv_14217:HG3_PB_SVrefine2PBcRDovetail_6872:HG2_PB_SVrefine2Falcon1plusDovetail_3307:HG2_PB_assemblyticsfalcon_7619:HG2_PB_HySA_26518:HG2_PB_PB10Xdip_8413:HG3_PB_SVrefine2Falcon1Dovetail_8821:HG4_PB_SVrefine2PBcRDovetail_7252:HG2_PB_SVrefine2PBcRplusDovetail_3109:HG2_PB_SVrefine2PB10Xhap12_10512;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7273:HG3_PB_SVrefine2PBcRDovetail_6872:HG2_PB_SVrefine2PBcRplusDovetail_3109:HG2_PB_SVrefine2PB10Xhap12_10512;NumExactMatchSVs=4;ClusterMaxShiftDist=0.297619;ClusterMaxSizeDiff=0.293651;ClusterMaxEditDist=0.357143;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=264;DistBack=24806;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=768;REFWIDENED=13:114058176-114058943;PctSeqSimilarity=0.9586;PctSizeSimilarity=0.8636;PctRecOverlap=0.1321;SizeDiff=36;StartDistance=-212;EndDistance=-212;GTMatch=0;TruScore=65;MatchId=1597.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:34:1/1:3:20:0:6:1/1:0:10:0:8:./.:0:8:./.:.:.:.:.:.
chr13	114072079	HG2_Ill_GATKHC_23177	A	AAACTTCTGTGTGTTAACTGGAAATGCGTTTACACACCAGGGATTTTAACCAGGGG	20	PASS	ClusterIDs=HG4_PB_HySA_21187:HG2_PB_PB10Xdip_8414:HG2_PB_assemblyticsfalcon_7620:HG4_Ill_manta_3419:HG4_Ill_Krunchall_20041:HG4_Ill_GATKHC_23155:HG4_Ill_GATKHCSBGrefine_10011:HG4_Ill_250bpfermikitraw_19111:HG3_Ill_scalpel_13954:HG3_Ill_Krunchall_19307:HG3_Ill_GATKHC_23048:HG3_Ill_GATKHCSBGrefine_9584:HG3_Ill_250bpfermikitraw_18806:HG2_Ill_manta_4021:HG2_Ill_Krunchall_19717:HG2_Ill_GATKHC_23177:HG2_Ill_GATKHCSBGrefine_9695:HG2_Ill_250bpfermikitraw_19381:HG2_PB_HySA_26520:HG3_PB_pbsv_14218;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19381:HG2_Ill_GATKHCSBGrefine_9695:HG2_Ill_GATKHC_23177:HG2_Ill_Krunchall_19717:HG2_Ill_manta_4021:HG3_Ill_250bpfermikitraw_18806:HG3_Ill_GATKHCSBGrefine_9584:HG3_Ill_GATKHC_23048:HG3_Ill_Krunchall_19307:HG3_Ill_scalpel_13954:HG4_Ill_250bpfermikitraw_19111:HG4_Ill_GATKHCSBGrefine_10011:HG4_Ill_GATKHC_23155:HG4_Ill_Krunchall_20041:HG4_Ill_manta_3419;NumExactMatchSVs=15;ClusterMaxShiftDist=0.132075;ClusterMaxSizeDiff=0.130841;ClusterMaxEditDist=0.232143;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=4616;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=111;REFWIDENED=13:114072028-114072138;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1598.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:33:1/1:3:10:1:19:./.:1:8:4:15:./.:3:36:./.:.:.:.:2413:.
chr13	114436463	HG2_PB_SVrefine2Falcon2Bionano_7287	C	CGTGTGTGTATGTGTGTGCACGTGTGTGTGCATGTGTGCATGTGTGCGCGTGTGTGCATGCGTGTGCGCGCACGTGTGTGCATGTATGTGTATGTGTGTGCATACGTGTGTGTGCACGTGTGCGCATGTGTATGTGTGTGCATACGTGTGTGCTCATGTATGTGTGCATACGTGTGTGCGTGTGTGCATGTATGTATGCATACATGTGTGCGCGTGTGTGCACGTGTGTGTGCGCGCGTGTGTATGTGTGCATACATGTGTGTGCGTGTGTAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8876:HG4_PB_HySA_21216:HG2_PB_pbsv_14587:HG4_PB_pbsv_14554:HG2_PB_SVrefine2PBcRplusDovetail_3123:HG2_PB_SVrefine2PB10Xhap12_10535:HG2_PB_SVrefine2Falcon2Bionano_7287;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7287:HG2_PB_SVrefine2PB10Xhap12_10535:HG2_PB_SVrefine2PBcRplusDovetail_3123;NumExactMatchSVs=3;ClusterMaxShiftDist=0.148673;ClusterMaxSizeDiff=0.145133;ClusterMaxEditDist=0.297297;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=272;DistBack=2877;DistForward=211;DistMin=211;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=594;REFWIDENED=13:114436464-114437057;PctSeqSimilarity=0.9898;PctSizeSimilarity=1;PctRecOverlap=0.9231;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=97;MatchId=1600.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:26:./.:17:11:1:10:./.:0:18:11:2:0/1:29:17:./.:.:.:.:.:.
chr13	114463540	HG2_PB_SVrefine2PBcRplusDovetail_3124	A	ATTGGTGTGTCTGGGGTTGGATTATGGTCTTTCTGCTTTGGTGTGTCGGGGTGGATTATGGTCTTTCTGCTTTGGGGTATCTGGGGGTGGGTTATGGTCTTTCTGCTTTGGGGTATCTGGGGGTGGATTATGGTCTTTCTGCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3322:HG4_PB_pbsv_14557:HG2_PB_pbsv_14591:HG2_PB_PB10Xdip_8448:HG4_PB_SVrefine2Falcon1Dovetail_8879:HG4_PB_SVrefine2PBcRDovetail_7264:HG2_PB_SVrefine2PBcRplusDovetail_3124:HG2_PB_SVrefine2PB10Xhap12_10537:HG2_PB_SVrefine2Falcon2Bionano_7288;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3322:HG2_PB_SVrefine2PBcRplusDovetail_3124:HG2_PB_SVrefine2PB10Xhap12_10537:HG2_PB_SVrefine2Falcon2Bionano_7288;NumExactMatchSVs=4;ClusterMaxShiftDist=0.062069;ClusterMaxSizeDiff=0.0551724;ClusterMaxEditDist=0.188811;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=142;DistBack=1845;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=471;REFWIDENED=13:114463541-114464011;PctSeqSimilarity=0.9889;PctSizeSimilarity=0.9861;PctRecOverlap=0.1241;SizeDiff=-2;StartDistance=-126;EndDistance=-126;GTMatch=0;TruScore=69;MatchId=1601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:41:1/1:2:16:4:23:./.:2:7:2:6:./.:3:0:./.:.:.:.:.:.
chr13	114527416	HG2_PB_pbsv_14600	A	AAGCACTGTTGTCTGGGTCTGAACTGTCAGGAGCTATGCGCGGTTGGGGTCTAACTTGTCAGGGCATGCGCGGTCTGGGGTCTGAGCTGTCACGGAGCACCTGCGGTCATGGGTCTGAACTGTCGGAGCACCTGCGCTCTGGGGTCTGCAGCTGTCGCGGAAGCACTATGGTCTGGGGTCTGCTGAGCTGTCGGCGAGGAGCACGCGCGCTGGGTCTGAAAAGCTGTCGGGAGCGACGCGCCGGATCTGGGTCTGAGCTGTCGGAGCCGCGCGTCTGGGGATGCTGAGCTGTCGGGAGCACGCGCGGTCTGCGGGTCTTGAGCTGTCGGGAGCACCGCGGTCTGGCGTCTGAAGCTGTCCGGGGCACGCGCGGTCTGGGCGGTCTGAGCTGTCGGACCGCGGCGTGTCTGGGGTCTGACTGTGGGAGCACGCGCGGTCTGGGGTCTGGAGCTGTCGGGAGCACCGCGTCTGGGTCTACTGTCCGGAGCACGCGCGGTCTGGGGTCGAGCTGTCGGGAGCACGCGCAGGTCTGGGTCTTAGCTGTCGCGAGCACGCGCGGTCTGGGCGTTCGAAGCTGTCGGGAGCACTGACGCGGTCTGGAGTCTGAGCTGTCGGAAGCACGCGCGCGTCTGGGGTCTGAGCTGTCGGCGAGCACGCGCGGTCGGGTCTGAGCTGTCGGGAGCACGCGCCGGTCTGGGTTCTGAGCTGTCGGGAGCACGCGCGGTCTGGAGGTCTGAGCTGTCGGCGAGCACGCGCGGTCTGCGGGCGTCTTGAGCTGTCTGGCGGAGCACGCGCGGTCTGGGGTCTGAGCTGTCGGAGCACGCGCGGTCTGGGTCTGAGGCCTGTCGGAGCACGCGCGGTCTGGGGTCTGAAGCTGTCGCGGAGCACCCTGCGGTATCTGGGGTCTGAGCTGTCTGGGCAGCAGCGGCGGTCTGGGGTCTGAGCTGTCGGGAGCACGCGCGGTCTGGGTCTGAGCTGTCGGGAGCACGCGCGGTTCTGGGGTCTGACTGTCGGTGAGCACGCGCGTTCTGGGGTCTGAAGCTGTCGGGGAGCACGCGCGCTCTGGGCGTCCTGAGCTGTCGGGAGCACCGCGGTCTGGGTCTGAGCTGTTCGGAGCACGCGCGGTCTGGGGTCTGAGCTTCAGGGACACGCGCGGTCTGGGGTCTGAGCTGTCGGGAGCACGCGCGGTCTCTGGGTCTGAGCTGCGGGAGCCACGCGCGTCTGGGGTCTGAGCTGTCGAGCACCCCGGTCTGGGTCTGAGCTTGTCGGAGCAAACCCGCGGTCTGGGGTCTGCCAGCTGTCGGAGCACCCGCGCGTCTGGGCTGAGCTTCGGGAGCACCCGCGGGTCTGCGGGTCTGAGCTGTCGGGAGCACCCGCGGTTGGGGTCTGAGCGGTCTGGAAGCACCCGGTCTGGGTTGAGCTGTCCGGGAGCACCCGCGGTCTGGGGTTCTGAAAGCTGTGGGAGCACGCGCGGTCTGGGTCTGAGCTGTCGGGAGCACGCGCGGTCTGCGGGTCTGAGCTGTCGGGAAGCACGCGCGCGTCTGGGTCTGAGGCTGTCCGGGAAAGCAACCGCGGTCTTATGCGGGTCTGAGCTGTCGGGTGAGCGCACGCGCGGTCTGGGTCTGAGCTGTCGGGAGCACGCGCCGGTCTGGGGTCATGAGCTGTCAGGGAGCACCGCGGTCTGGGGTCTGAGCTTCGGGAGCACCCGCGTCTGGGCGTTCATGAGCTGGCGGGAGCACGCGAGGTCTGGGGGTCTGATTCTTGTCGGGATCACCCGCGGTCTGGGGTCTGAGCCTGTCGGGAGCACCCCGCGGTCTGGGTTCTGAGCTGTCGGGAGCCCCCGCGGTCTGGGGTCTGAGCTGTCGGGAGCACCCGCGGTCTGGGGTCTGAGCTGTCGGAGCAACCTATGTCTGGGTGTCTGAGCTGTTCGGGAGCACGCGCAGTCTGGGGTCTGAGCTGTCGGAAGCAACGCGGGGTCTTGGGTCTGAGCTGTCGGGGAGCACCTGCGGTGCTGGGGTCTGAGCTGTCCAGGAGCATGTGCGGTCTGGGGTCTGATCTGTCGGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3326:HG2_PB_pbsv_14600:HG2_PB_SVrefine2PB10Xhap12_10546:HG2_PB_HySA_26570:HG2_PB_SVrefine2PBcRplusDovetail_3132;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_14600;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147686;ClusterMaxSizeDiff=0.147686;ClusterMaxEditDist=0.213729;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2064;DistBack=26;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=407;REFWIDENED=13:114527011-114527417;PctSeqSimilarity=0.9485;PctSizeSimilarity=0.9758;PctRecOverlap=0.9748;SizeDiff=50;StartDistance=27;EndDistance=27;GTMatch=0;TruScore=96;MatchId=1603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:19:60:0|1:27:1:1:27:./.:8:1:18:0:0/0:23:0:0/1:48:21:.:4244:.
chr13	114798892	HG3_PB_pbsv_14286	C	CCACGGCACCCCACACTTGACACACGCCCCACAGCACCCCACACTGACACCCATGCCCACGGCACCCTCACATTGACACCACGTGT	10	PASS	ClusterIDs=HG3_PB_pbsv_14286:HG2_PB_PB10Xdip_8498:HG2_PB_HySA_26593:HG2_PB_pbsv_14629:HG2_PB_SVrefine2PB10Xhap12_10567:HG3_PB_HySA_21994;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_14286;NumExactMatchSVs=1;ClusterMaxShiftDist=0.122222;ClusterMaxSizeDiff=0.0888889;ClusterMaxEditDist=0.388889;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=85;DistBack=2859;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=11;REFWIDENED=13:114798891-114798904;PctSeqSimilarity=0.9353;PctSizeSimilarity=0.9551;PctRecOverlap=0.6629;SizeDiff=-4;StartDistance=-28;EndDistance=-28;GTMatch=0;TruScore=85;MatchId=1605.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:7:16:./.:4:3:3:12:0/0:33:2:27:1:./.:0:0:./.:.:.:.:.:.
chr13	114828017	HG3_Ill_SVrefine2DISCOVARDovetail_10409	A	ATCACAGCCCACGTCCGCACGCAGACTCGGACACGCGTGCTCACAGCCCACGTCCGCACGCAGACTCAGACACGCGTGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3638:HG3_PB_pbsv_14287:HG3_Ill_250bpfermikitraw_18837:HG2_PB_pbsv_14631:HG3_Ill_SVrefine2DISCOVARDovetail_10409:HG2_PB_SVrefine2Falcon2Bionano_7302;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3638:HG3_Ill_SVrefine2DISCOVARDovetail_10409:HG2_PB_SVrefine2Falcon2Bionano_7302;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0853659;ClusterMaxSizeDiff=0.0731707;ClusterMaxEditDist=0.238095;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=78;DistBack=-22312;DistForward=6881;DistMin=-22312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=203;REFWIDENED=13:114828018-114828220;PctSeqSimilarity=0.9897;PctSizeSimilarity=1;PctRecOverlap=0.1519;SizeDiff=0;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=71;MatchId=1607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:29:3:0:28:0/0:6:0:8:0:0/1:19:4:./.:.:.:.:.:.
chr13	114838992	HG2_Ill_250bpfermikitraw_19406	A	AGGAAAATGGGACGGTGACGTACACGCTCGGGACATTGTCTACGCACAGAAAAATTCCCTACACGCG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_19406:HG3_PB_HySA_21999:HG3_PB_pbsv_14291:HG2_PB_HySA_26594:HG2_PB_pbsv_14635:HG2_Ill_GATKHC_23223;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19406:HG2_Ill_GATKHC_23223;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.233577;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=22;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=509;REFWIDENED=13:114838583-114839091;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1608.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:28:0|1:22:2:6:29:./.:3:0:2:3:0/1:17:9:./.:.:.:.:.:.
chr13	114846294	HG2_PB_SVrefine2Falcon1plusDovetail_3346	G	GGTGCCCCAGGGCACAGGGCCGTCCACCTAGAACACCAATAGTGCCGTGTGGCAGAGGGCCGTCCACCCAAAACACCAATAGTGCCCCTCGGCAGAGGGCCGTCCACCTAGAACACCAATAGTGCCCCTCGGCAGAGGGCCGTCCACCTAGAACACCAAGAGTGCCCCTCGGCAGAGGGCCATCCACCCAAAACACCAATAGTGCCCCTCGGCAGAGGGCCGTCCACCTAGAACACCAATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7272:HG2_PB_pbsv_14638:HG4_PB_HySA_21229:HG4_PB_pbsv_14581:HG4_PB_SVrefine2Falcon1Dovetail_8900:HG4_Ill_SVrefine2DISCOVARDovetail_10286:HG2_PB_SVrefine2Falcon1plusDovetail_3346;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3346:HG4_Ill_SVrefine2DISCOVARDovetail_10286;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0773931;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.264766;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=240;DistBack=140;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=313;REFWIDENED=13:114846295-114846607;PctSeqSimilarity=0.9862;PctSizeSimilarity=1;PctRecOverlap=0.3402;SizeDiff=0;StartDistance=-159;EndDistance=-159;GTMatch=0;TruScore=77;MatchId=1610.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:43:./.:7:23:18:14:./.:1:12:4:0:0/1:9:8:./.:.:.:.:.:.
chr14	21176134	HG2_PB_PB10Xdip_9548	T	TTTTTTTTTTTTTTTTTTTTTTTTTCGCCCTTAATCCATTTAATCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGCAGAGGCGCCCCTCACCTCCCGGACGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCCGACATCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACATCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCTCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGACGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGACTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTCACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGAGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTCACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCAGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCTCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGATGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGTGGTTGCCGGGCAGAGGGTCTCCTCACTTCTCAGGTGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCAGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGAGGATGGGCTGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCAGCCGGGCAGAGGCTGCAATCTTGGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGTTGGCGGATCACTCGCGGTTAGGGGCTGGAGACCGGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAACCAGTCAGGCGTGGCGGCGCACTGGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGCTCCGCATGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGGAGAGGGAGAGGGAGAGGGAGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGGGGAGAGGGAGAGGGGAGGGAGAGGGAGAGGGACGCAAAGGGATTT	10	PASS	ClusterIDs=HG2_PB_HySA_26683:HG2_PB_pbsv_14684:HG2_PB_PB10Xdip_9548:HG3_PB_pbsv_14334:HG2_PB_SVrefine2PB10Xhap12_10601:HG4_PB_SVrefine2Falcon1Dovetail_8922:HG3_PB_SVrefine2PBcRDovetail_6924:HG3_PB_SVrefine2Falcon1Dovetail_8891:HG2_PB_SVrefine2PBcRplusDovetail_3168:HG2_PB_SVrefine2Falcon1plusDovetail_3380;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_9548;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0364364;ClusterMaxSizeDiff=0.0356356;ClusterMaxEditDist=0.207895;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2472;DistBack=0;DistForward=49584;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=14:21176124-21176134;PctSeqSimilarity=0.9899;PctSizeSimilarity=0.9798;PctRecOverlap=0.9802;SizeDiff=-51;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=98;MatchId=1613.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:41:./.:10:11:11:19:0|1:24:0:0:12:0/1:32:12:0/1:89:165:.:2549:.
chr14	22041648	HG3_PB_SVrefine2Falcon1Dovetail_8897	T	TAAAATAAAAAAATTAGCCCAGGCCGGGCGCGGTGGCTCACGCCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3175:HG2_PB_PB10Xdip_9557:HG2_PB_HySA_26695:HG2_PB_pbsv_14690:HG4_PB_pbsv_14629:HG4_PB_SVrefine2Falcon1Dovetail_8927:HG2_PB_assemblyticsfalcon_7703:HG2_PB_SVrefine2Falcon2Bionano_7326:HG2_PB_SVrefine2PB10Xhap12_10610:HG3_PB_SVrefine2Falcon1Dovetail_8897:HG4_PB_SVrefine2PBcRDovetail_7290:HG2_PB_SVrefine2Falcon1plusDovetail_3385;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8897;NumExactMatchSVs=1;ClusterMaxShiftDist=0.298157;ClusterMaxSizeDiff=0.298157;ClusterMaxEditDist=0.355476;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=326;DistBack=898;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=14:22041649-22041669;PctSeqSimilarity=0.9865;PctSizeSimilarity=0.9879;PctRecOverlap=0.9789;SizeDiff=-4;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=98;MatchId=1614.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:42:./.:30:19:8:15:./.:0:3:12:1:0/1:44:14:0/1:7:30:.:.:.
chr14	22578791	HG3_PB_SVrefine2Falcon1Dovetail_8898	T	TGACAACTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8928:HG3_PB_pbsv_14343:HG2_PB_pbsv_14692:HG2_PB_assemblyticsfalcon_7707:HG2_10X_SVrefine210Xhap12_10147:HG4_PB_pbsv_14631:HG4_PB_SVrefine2PBcRDovetail_7292:HG2_PB_SVrefine2PBcRplusDovetail_3176:HG2_PB_SVrefine2PB10Xhap12_10611:HG2_PB_SVrefine2Falcon2Bionano_7327:HG2_PB_SVrefine2Falcon1plusDovetail_3386:HG3_PB_SVrefine2PBcRDovetail_6931:HG3_PB_SVrefine2Falcon1Dovetail_8898:HG2_PB_PB10Xdip_9559:HG2_PB_PB10Xdip_9558;NumClusterSVs=15;ExactMatchIDs=HG2_PB_PB10Xdip_9558:HG2_PB_PB10Xdip_9559:HG3_PB_SVrefine2Falcon1Dovetail_8898:HG3_PB_SVrefine2PBcRDovetail_6931;NumExactMatchSVs=4;ClusterMaxShiftDist=0.159754;ClusterMaxSizeDiff=0.159754;ClusterMaxEditDist=0.270353;PBcalls=14;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=58194;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=14:22578792-22578806;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:84:./.:0:2:0:1:./.:0:4:0:4:./.:0:6:1/1:2:89:.:.:.
chr14	23105130	HG2_PB_SVrefine2Falcon2Bionano_7329	G	GCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCT	10	PASS	ClusterIDs=HG2_PB_pbsv_14696:HG2_PB_assemblyticsfalcon_7711:HG4_PB_SVrefine2PBcRDovetail_7294:HG2_PB_SVrefine2Falcon1plusDovetail_3389:HG4_PB_pbsv_14634:HG3_PB_SVrefine2PBcRDovetail_6934:HG3_PB_pbsv_14347:HG2_PB_SVrefine2PB10Xhap12_10614:HG2_PB_SVrefine2Falcon2Bionano_7329:HG2_PB_SVrefine2PBcRplusDovetail_3179:HG2_PB_PB10Xdip_9565:HG2_PB_PB10Xdip_9564;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7329:HG2_PB_SVrefine2PB10Xhap12_10614;NumExactMatchSVs=2;ClusterMaxShiftDist=0.294872;ClusterMaxSizeDiff=0.294872;ClusterMaxEditDist=0.294872;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=162;DistBack=70636;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=41;REFWIDENED=14:23105131-23105171;PctSeqSimilarity=0.9819;PctSizeSimilarity=0.9643;PctRecOverlap=0.9645;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1616.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:1/1:0:35:0:7:./.:0:1:0:1:./.:2:1:./.:.:.:.:.:.
chr14	24236375	HG3_Ill_GATKHCSBGrefine_9642	T	TAGGGGGAGCAGAAGGTAGATACAATTGGGCAATTCTTGGAACCAATTTGATATTGAGGGTGAGGG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3665:HG4_PB_pbsv_14641:HG3_PB_pbsv_14354:HG3_PB_HySA_22080:HG2_PB_pbsv_14703:HG2_PB_HySA_26713:HG4_PB_HySA_21340:HG4_Ill_svaba_18210:HG4_Ill_Krunchall_20109:HG4_Ill_GATKHC_23245:HG4_Ill_GATKHCSBGrefine_10057:HG4_Ill_250bpfermikitraw_19187:HG3_Ill_svaba_18331:HG3_Ill_manta_3287:HG3_Ill_Krunchall_19383:HG3_Ill_GATKHC_23148:HG3_Ill_GATKHCSBGrefine_9642:HG3_Ill_250bpfermikitraw_18889:HG2_Ill_svaba_18182:HG2_Ill_manta_4033:HG2_Ill_Krunchall_19795:HG2_Ill_GATKHC_23289:HG2_Ill_250bpfermikitraw_19459:HG3_PB_SVrefine2Falcon1Dovetail_8906:HG3_Ill_SVrefine2DISCOVARDovetail_10434;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19459:HG2_Ill_GATKHC_23289:HG2_Ill_Krunchall_19795:HG2_Ill_manta_4033:HG2_Ill_svaba_18182:HG3_Ill_250bpfermikitraw_18889:HG3_Ill_GATKHCSBGrefine_9642:HG3_Ill_GATKHC_23148:HG3_Ill_Krunchall_19383:HG3_Ill_manta_3287:HG3_Ill_svaba_18331:HG4_Ill_250bpfermikitraw_19187:HG4_Ill_GATKHCSBGrefine_10057:HG4_Ill_GATKHC_23245:HG4_Ill_Krunchall_20109:HG4_Ill_svaba_18210:HG4_PB_HySA_21340;NumExactMatchSVs=17;ClusterMaxShiftDist=0.075188;ClusterMaxSizeDiff=0.075188;ClusterMaxEditDist=0.270677;PBcalls=7;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=65;DistBack=-74;DistForward=62924;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=79;REFWIDENED=14:24236371-24236449;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:43:0|1:33:2:2:41:./.:4:35:13:0:0/1:27:25:./.:.:.:.:.:.
chr14	24369410	HG3_PB_SVrefine2PBcRDovetail_6941	C	CAAAAATATATCTGAGACACATTAACATGAAAAAGACAAGTTAACAAATGATGTGTAGCATGTAAATACATTTATGTAAACGTACCAAATGATGTAATTATATGAGTTCCTGTCTGATTGTATGTTCAGAGACACAGAGGGGAAACTAAAAGTTGTGATATTATGACATAAGAAATTTACATTTTGATCTTCTTTCCCAGCTATTGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7334:HG2_PB_HySA_26714:HG3_PB_pbsv_14355:HG4_PB_SVrefine2Falcon1Dovetail_8934:HG2_PB_pbsv_14704:HG3_PB_SVrefine2PBcRDovetail_6941:HG3_PB_SVrefine2Falcon1Dovetail_8907:HG3_Ill_SVrefine2DISCOVARDovetail_10436:HG4_PB_HySA_21343:HG4_PB_pbsv_14642;NumClusterSVs=10;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_10436:HG3_PB_SVrefine2Falcon1Dovetail_8907:HG3_PB_SVrefine2PBcRDovetail_6941:HG4_PB_SVrefine2Falcon1Dovetail_8934;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0959233;ClusterMaxSizeDiff=0.0815348;ClusterMaxEditDist=0.247086;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=206;DistBack=9171;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=205;REFWIDENED=14:24369411-24369615;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:28:0|1:22:2:0:30:./.:2:0:1:26:0/1:11:21:./.:.:.:.:.:.
chr14	24408494	HG2_Ill_SVrefine2DISCOVARplusDovetail_3667	GGC	CCATAAACAACTGAAGTGGATTCCAATAGGGGACTGGTAAGTGATAGTTCATCCAGATAATGAACAAAGGAATAAGAATGGAGTAGATCTGTATGGCTCGCTAGTCAAAATTCTCCTAAATACATCAACAAGCAGAGAAGCACAGACACACATTGACACACACAAATGAGTGCATGTAAAAAATAATGAAAACTGAATAAGGTCT	20	PASS	ClusterIDs=HG2_Ill_Spiral_968:HG4_Ill_Cortex_1028:HG2_Ill_Cortex_2488:HG2_PB_SVrefine2Falcon2Bionano_7336:HG2_Ill_SVrefine2DISCOVARplusDovetail_3667:HG2_PB_pbsv_14706:HG4_PB_pbsv_14644:HG4_Ill_MetaSV_1494:HG2_Ill_MetaSV_1416:HG4_Ill_Spiral_1127;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3667:HG2_PB_SVrefine2Falcon2Bionano_7336;NumExactMatchSVs=2;ClusterMaxShiftDist=0.04914;ClusterMaxSizeDiff=0.044226;ClusterMaxEditDist=0.157248;PBcalls=3;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=202;DistBack=-3;DistForward=-2;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:24408497-24408493;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.9901;PctRecOverlap=0.9707;SizeDiff=2;StartDistance=3;EndDistance=5;GTMatch=0;TruScore=98;MatchId=1620.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:0|1:34:1:1:21:1|0:0:38:24:0:0/1:20:8:./.:.:.:.:.:.
chr14	24681603	HG3_PB_SVrefine2PBcRDovetail_6945	C	CTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCCAGAGTGCAGTGGCATGATCTCAGCTCATTGCAACCTCCGTCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCTGAGTAGCTGGGACTACAGGCACACACCATCATGCCCACCTAATTTTTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3395:HG2_PB_PB10Xdip_9581:HG2_PB_pbsv_14711:HG4_PB_HySA_21348:HG3_PB_HySA_22083:HG2_PB_HySA_26716:HG4_PB_pbsv_14650:HG2_Ill_SVrefine2DISCOVARplusDovetail_3670:HG4_PB_SVrefine2PBcRDovetail_7302:HG4_PB_SVrefine2Falcon1Dovetail_8938:HG3_PB_SVrefine2PBcRDovetail_6945:HG3_PB_SVrefine2Falcon1Dovetail_8908:HG2_PB_SVrefine2PBcRplusDovetail_3188:HG2_PB_SVrefine2PB10Xhap12_10626:HG2_PB_SVrefine2Falcon2Bionano_7338;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3395:HG4_PB_SVrefine2PBcRDovetail_7302:HG4_PB_SVrefine2Falcon1Dovetail_8938:HG3_PB_SVrefine2PBcRDovetail_6945:HG3_PB_SVrefine2Falcon1Dovetail_8908:HG2_PB_SVrefine2PBcRplusDovetail_3188:HG2_PB_SVrefine2PB10Xhap12_10626:HG2_PB_SVrefine2Falcon2Bionano_7338;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0532544;ClusterMaxSizeDiff=0.0473373;ClusterMaxEditDist=0.267442;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=165;DistBack=-165;DistForward=-1;DistMin=-165;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=341;REFWIDENED=14:24681604-24681944;PctSeqSimilarity=0.9614;PctSizeSimilarity=1;PctRecOverlap=0.0424;SizeDiff=0;StartDistance=-158;EndDistance=-158;GTMatch=0;TruScore=66;MatchId=1621.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:1:34:0:12:./.:2:0:2:0:./.:3:1:./.:.:.:.:.:.
chr14	24943035	HG3_PB_SVrefine2PBcRDovetail_6946	G	ATCAGCACTCTCTACCTAGCTAATCTGGTGGGGACTTGGAGAACTTTTATGTCTAGCTAAAGGATTGTAAATGCACCAATCAGCACTCTGTGTCTAGCTCAAGGTTTGTAAGCTCACCAA	20	PASS	ClusterIDs=HG2_PB_HySA_26720:HG2_PB_assemblyticsfalcon_7730:HG4_PB_SVrefine2PBcRDovetail_7305:HG4_PB_SVrefine2Falcon1Dovetail_8942:HG4_Ill_SVrefine2DISCOVARDovetail_10321:HG3_PB_SVrefine2PBcRDovetail_6946:HG3_PB_SVrefine2Falcon1Dovetail_8910:HG3_Ill_SVrefine2DISCOVARDovetail_10438:HG2_PB_SVrefine2PBcRplusDovetail_3190:HG2_PB_SVrefine2PB10Xhap12_10630:HG2_PB_SVrefine2Falcon2Bionano_7339:HG2_PB_SVrefine2Falcon1plusDovetail_3397:HG2_Ill_SVrefine2DISCOVARplusDovetail_3671:HG4_PB_pbsv_14653:HG2_PB_PB10Xdip_9586:HG2_PB_PB10Xdip_9585:HG4_Ill_MetaSV_1497:HG4_Ill_GATKHC_23251:HG4_Ill_GATKHCSBGrefine_10064:HG4_Ill_250bpfermikitraw_19194:HG4_Ill_150bpfermikitraw_18479:HG3_Ill_GATKHC_23152:HG3_Ill_GATKHCSBGrefine_9645:HG3_Ill_250bpfermikitraw_18895:HG3_Ill_150bpfermikitraw_18357:HG2_Ill_GATKHC_23296:HG2_Ill_GATKHCSBGrefine_9761:HG3_PB_HySA_22088:HG4_PB_HySA_21355:HG2_PB_pbsv_14714;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3671:HG2_PB_SVrefine2Falcon1plusDovetail_3397:HG2_PB_SVrefine2Falcon2Bionano_7339:HG2_PB_SVrefine2PB10Xhap12_10630:HG2_PB_SVrefine2PBcRplusDovetail_3190:HG3_Ill_SVrefine2DISCOVARDovetail_10438:HG3_PB_SVrefine2Falcon1Dovetail_8910:HG3_PB_SVrefine2PBcRDovetail_6946:HG4_Ill_SVrefine2DISCOVARDovetail_10321:HG4_PB_SVrefine2Falcon1Dovetail_8942:HG4_PB_SVrefine2PBcRDovetail_7305;NumExactMatchSVs=11;ClusterMaxShiftDist=0.057377;ClusterMaxSizeDiff=0.0491803;ClusterMaxEditDist=0.204918;PBcalls=16;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=119;DistBack=-30;DistForward=5;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=191;REFWIDENED=14:24942844-24943034;PctSeqSimilarity=0.9756;PctSizeSimilarity=1;PctRecOverlap=0.1176;SizeDiff=0;StartDistance=105;EndDistance=105;GTMatch=0;TruScore=69;MatchId=1622.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:72:1/1:3:46:0:25:./.:3:0:9:0:0/1:8:16:./.:.:.:.:.:.
chr14	25599107	HG2_Ill_GATKHC_23298	T	TATATATAGTCATATATATATAGTCATATATATAGTCATATATATATAGTCATATATATAGTC	20	PASS	ClusterIDs=HG3_PB_pbsv_14364:HG4_Ill_svaba_18217:HG4_PB_pbsv_14657:HG4_Ill_GATKHC_23254:HG4_Ill_GATKHCSBGrefine_10066:HG4_Ill_250bpfermikitraw_19197:HG4_Ill_150bpfermikitraw_18482:HG3_Ill_svaba_18337:HG3_Ill_Spiral_15121:HG3_Ill_Krunchall_19392:HG3_Ill_GATKHC_23155:HG3_Ill_GATKHCSBGrefine_9646:HG3_Ill_250bpfermikitraw_18898:HG3_Ill_150bpfermikitraw_18361:HG2_Ill_svaba_18189:HG2_Ill_Krunchall_19805:HG2_Ill_GATKHC_23298:HG2_Ill_GATKHCSBGrefine_9762:HG2_Ill_250bpfermikitraw_19467:HG2_Ill_150bpfermikitraw_18342:HG3_PB_HySA_22094:HG2_PB_pbsv_14716;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18342:HG2_Ill_250bpfermikitraw_19467:HG2_Ill_GATKHCSBGrefine_9762:HG2_Ill_GATKHC_23298:HG2_Ill_Krunchall_19805:HG2_Ill_svaba_18189:HG3_Ill_150bpfermikitraw_18361:HG3_Ill_250bpfermikitraw_18898:HG3_Ill_GATKHCSBGrefine_9646:HG3_Ill_GATKHC_23155:HG3_Ill_Krunchall_19392:HG3_Ill_Spiral_15121:HG3_Ill_svaba_18337:HG4_Ill_150bpfermikitraw_18482:HG4_Ill_250bpfermikitraw_19197:HG4_Ill_GATKHCSBGrefine_10066:HG4_Ill_GATKHC_23254:HG4_Ill_svaba_18217;NumExactMatchSVs=18;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.238806;PBcalls=4;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=27;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=7;REFWIDENED=14:25599106-25599115;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1623.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:35:0|1:38:4:1:30:1|0:2:31:37:0:0/1:30:26:./.:.:.:.:.:.
chr14	25741910	HG2_10X_SVrefine210Xhap12_10152	A	ACAGTACTGCATGCTGTTTCAATTGTTTCTCTTAAGGAAGGTATTGTAATCCTTGACCAAAAATACCTTATCTGTTAGGGTGCCTGGTGTTTCTCATATTATCATCTTTCCTTAATGTTCTTTAGCCAATTTCTTAAAATTATGCCATTCCTCTTCCTTTGCTACAATTGCATGCAAACAAAGCTGAGTTGCCAATGTAACTGAAAGTTTTTCTGGGACCATGGGAAAGACTTTAGATATTTCTGTTTTCAGTTAGTAGAGAAAGCAACTTGGCATTTAATTCACAGCCCTTTCAGACTGCCAGCCATGAAGTATTCCTTACCAGTCTCCCACTGCTGAGTCTTGGTTCATCTGTCCCCTCCAGTTGAGTCTTTGTTTTTCTATAAATAAATTCATCTGGTTTACCTTTTTTTTGTAAATCTGCCTTACATTGGCTAGACCTAAATGAGGCCAGACTTCCTGAAAATGGAGGCAGTCTCAGCTCTTAGGCCACTCAAAGACCCCTGAGAGAACTTGGGCTGGACTTGGTGCATGGGCGTGGGGCTGCCCTTTCCTCCTTTCATCGGGAGCCCTCAGAAGTGGGGCGGCAGCTCTTCTAGACAAGACAATTCTTAGTGCCTTAATTTTTTTTAATTCAAGGAGTCAACTTTCATTGGAATTTCTAACACATTAGAGTAGAAATTAGGTTTAAAAGAATAGTACCCAGAACTGAGAAATTGTGAGGGGTCAAAGAGGTCAGGATGAAAAGCCAATCAGGAAGCTGTAAAGAAAGGGCACTGGTTGGGCTGGGGGGTGGGATGTGGTGAAAGAAGGCATGGAAAAGAGGTAGTGAGGGACCTGTGCTCAGCACAGAGAATCACCAGCTGTTCTCCTAGTCTTGGGGGAGTGTTGGGATCTGTGTGTACATGAAAGCCATTAATATTTGTAGCCAGGGGGACTTGCACTGAGGCTTAAATACAGATTTTATATATATATGTACATATATATACACACACACACACAGAAATGTATATCTATAAAGAACATATACATACACACATGCATAATATATATATATTCAACTTTATAACCCATTAAGAAGGCCAGGTTTTTTTTTTTATAAGGGGTAGGGAAAGAAAGGCATTTTTTTTCCCCTAAGTACTACTAGGGAGCTAATGGTCTCCTGTTTGTTTGAACTCTTCTAGCTACAAGTCTAAGAGGAAAAAATGAGACAGCATGGAGAGGGGCCTGAGAGTTGAGCCAGCTGGCATTTACCTGACATGACACATTCATTTCCTTCCTGTCTCAATACTAAGGCTAGACCTGGAAAACCTTTTAAAGGAAGCAGTACCCAAGAAAAGAAGTGTAATGCAAAAAAAAAAATTATTTAGTGCATGCCAATCAGGATAGACTCAAAAAAATCCACTTTCAGATACGTCTGTAATTAAACTGTTGAAAACCAAAGACAAAGACAAAGAATCTCAAAAGCAGCCACAGAAAAACGAAGCATTGCATATAGGGGAACAATGATTGGAATGACTGTAATTCTTTATCAGAAAACCCAGAGACCAGAAGACAGTAGAACAACATTTTTTGAAGTGCTTCACACAGAATTGTATGCCTAGAGGTTCTAGAGGGAATGTGGTACAGGTGGCTATTTTATAATTTGACTGGAAGAGGTGGAAGAAGCAGCTCATGGAGACTGCTTAGTTGCTCTCTTGTTCTGCTGTTTTGCAGAGTGTTCCGCTCTTGTGTTTTGTAGAGTTAAAGCAGAGAAACAAATTTTACCAAATGATGAAACACTGGTAAATGTGAGCACCAACCCGCCTCAGCTGCTTGCTTCATTTCATCCAATCCATGTTTTTATGTAAACATTCTTTCTTTTAAATTTGCATCCCCTTTT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9589:HG2_PB_pbsv_14717:HG3_PB_pbsv_14365:HG2_Ill_breakscan11_4549:HG2_PB_SVrefine2PB10Xhap12_10632:HG3_PB_SVrefine2PBcRDovetail_6948:HG3_Ill_SVrefine2DISCOVARDovetail_10444:HG2_PB_SVrefine2Falcon2Bionano_7341:HG2_PB_SVrefine2Falcon1plusDovetail_3399:HG2_10X_SVrefine210Xhap12_10152:HG2_PB_SVrefine2PBcRplusDovetail_3192:HG3_PB_SVrefine2Falcon1Dovetail_8912:HG4_PB_SVrefine2Falcon1Dovetail_8944:HG3_PB_HySA_22095;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10152:HG2_PB_SVrefine2Falcon1plusDovetail_3399:HG2_PB_SVrefine2Falcon2Bionano_7341;NumExactMatchSVs=3;ClusterMaxShiftDist=0.061722;ClusterMaxSizeDiff=0.0612033;ClusterMaxEditDist=0.196148;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=1881;DistBack=10475;DistForward=7009;DistMin=7009;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=14:25741911-25741914;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1624.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:47:0|1:34:0:0:61:0|1:35:0:0:21:0/1:31:23:0/1:63:90:.:1712:.
chr14	26046844	HG2_Ill_GATKHCSBGrefine_9764	C	CTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAATAAATAAATAAATAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_26730:HG2_PB_pbsv_14719:HG4_PB_pbsv_14659:HG2_PB_assemblyticsfalcon_7738:HG2_PB_SVrefine2Falcon1plusDovetail_3401:HG2_PB_SVrefine2PBcRplusDovetail_3194:HG4_Ill_GATKHCSBGrefine_10068:HG2_Ill_GATKHCSBGrefine_9764;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9764:HG4_Ill_GATKHCSBGrefine_10068;NumExactMatchSVs=2;ClusterMaxShiftDist=0.229032;ClusterMaxSizeDiff=0.225806;ClusterMaxEditDist=0.274194;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=14:26046845-26046844;PctSeqSimilarity=0.9834;PctSizeSimilarity=0.9673;PctRecOverlap=0.9644;SizeDiff=-11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:44:./.:23:20:18:16:./.:2:7:37:0:0/1:30:7:0/1:9:25:.:.:.
chr14	27765229	HG2_PB_SVrefine2PB10Xhap12_10640	T	TTCACCAATAACATATGACAAAGCAGAAGGAAGTTACTTCAGTGATTGGGTTATAAAATATCAAGACTTCTATATTGCTTACAGACTTTATTACCTTTTTGGCTTACATAATCAATAAAGAGAAACTGCCATATGAGAGAGCACCCATGGCAACAAATTAAAGGATCCTTTGCCTAACAGCCAGTGAAGAACTGAGGTCCTCAGTCTAACAATCTTCCGGAACTGAATGCTATCAATGATCACTGAATGAGCTTGCAGTTGAATCTTTCTTTAAGTTAAGCCGTCGGAAGAGACCACAAACCCTGGCTAATGCCTTGATTGCAGCCTTGCGGAATAGTTAGAAGCAGAGGACCATGCCCAGATGCCTGACCAACAGAAATTATGAGATAAAAGTCAGTAGTTTTAAGCCATTCGTTATTGGTGTGATTTGTTATGTGGCAACAGATAACTAATGTGACCTTTTAGATTAATCAATTTGCTTGTTTGGAACTTGGTTGTTTTTGTTTTTTTCAATGAGTGTGTGACAAGAATTTTGAAGTGCTTCTTTAAAAATTCATTGGAACCAAGCCAGTATTTATGAGTTTTAATATTAAAATTTCCTTTTATCTAAGGCAAAAATGTTTTGTAATTTGCAATGTTAAAAACTCAAAACCTGCGAAAATAGCAGTAAACTGGAACAAGGGCTTTCAAAGTTTTTCAAGACACACATAACAGTGCTTGTTTAAATTGTGAAATAACTCTGAGATCTTAAATTCATTTTGATGTAAATTAACCTTAGAATGTTAGCAAACATACTAACAAATACACTAAAATTTACTTTGATGGCCTGAGTACATTCAATATTTCTAAGGATAAATTTAAACAATAATATTCCTTCAAGGCAGATTTCCTTTCAGTGGATAAACTCAACTTGGACTGATGAATAATGATCCTTTGTGTCAAACTCTCTTGTATTTTCACAACATACATCCTACTTGAAATAGCACATGTGTTTTGTATTAGTCCATTCTTGTACTCCTATTCAGAAATATCTGAGACTGGGTAATTTATAAGAAAAGAAAATTAATTGGCTCACAGTTCTGCAAGCTGTACAGAAAGCACAGTGGCATCTGCTTCTGGGGAGGGCTCTGGTGCTTTCAATCTTGGCAGAAGGTAAAAGGTGAGCAGACAAGTCACATGATGAGGATGGGAATGAAAGAGAGAGAGAGTATATGTATGGTCGGGGTGGGTGCCACACTTTATACAACCAGATCTTGTGAGGACAGTACAAAACTGTGAGAAATTGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9593:HG4_Ill_Spiral_1130:HG3_Ill_Spiral_15141:HG4_PB_SVrefine2Falcon1Dovetail_8949:HG3_PB_HySA_22120:HG4_PB_HySA_21378:HG2_PB_HySA_26757:HG2_PB_SVrefine2PBcRplusDovetail_3197:HG2_PB_SVrefine2Falcon1plusDovetail_3404:HG4_Ill_SVrefine2DISCOVARDovetail_10337:HG2_PB_SVrefine2PB10Xhap12_10640:HG2_Ill_GATKHCSBGrefine_9767:HG2_10X_SVrefine210Xhap12_10158:HG4_Ill_MetaSV_1502:HG4_Ill_GATKHCSBGrefine_10071:HG3_Ill_MetaSV_1532:HG3_Ill_GATKHCSBGrefine_9648:HG2_Ill_breakscan11_4550:HG2_PB_pbsv_14725;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10158:HG2_Ill_GATKHCSBGrefine_9767:HG2_PB_SVrefine2PB10Xhap12_10640:HG4_Ill_SVrefine2DISCOVARDovetail_10337;NumExactMatchSVs=4;ClusterMaxShiftDist=0.140867;ClusterMaxSizeDiff=0.140867;ClusterMaxEditDist=0.252288;PBcalls=9;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=1285;DistBack=1230;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=14:27765230-27765231;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:43:0|1:20:1:0:42:1|0:0:17:26:0:0/1:25:22:0/1:42:74:.:.:.
chr14	29031316	HG2_Ill_GATKHC_23337	G	GTAAGACTGAAGGACAAAGAAACTGTCTGTAAGTCCTACACTTCAATCAACAAAATTTGTGTTTCACA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_18378:HG3_PB_pbsv_14376:HG2_PB_pbsv_14731:HG2_PB_HySA_26770:HG3_PB_HySA_22124:HG2_PB_PB10Xdip_9599:HG2_PB_PB10Xdip_9598:HG2_Ill_breakscan11_4551:HG4_PB_assemblyticsfalcon_7682:HG4_Ill_svaba_18249:HG4_Ill_manta_3439:HG4_Ill_Krunchall_20159:HG4_Ill_GATKHC_23298:HG4_Ill_GATKHCSBGrefine_10077:HG4_Ill_Cortex_1038:HG4_Ill_250bpfermikitraw_19235:HG4_Ill_150bpfermikitraw_18524:HG3_PB_assemblyticsfalcon_7784:HG3_Ill_svaba_18360:HG3_Ill_manta_3292:HG3_Ill_Spiral_15149:HG3_Ill_Krunchall_19419:HG3_Ill_GATKHC_23190:HG3_Ill_GATKHCSBGrefine_9653:HG3_Ill_Cortex_1084:HG3_Ill_250bpfermikitraw_18920:HG3_Ill_150bpfermikitraw_18388:HG2_PB_assemblyticsfalcon_7769:HG2_PB_assemblyticsPBcR_7488:HG2_Ill_svaba_18216:HG2_Ill_manta_4038:HG2_Ill_SpiralSDKrefine_4828:HG2_Ill_Krunchall_19843:HG2_Ill_GATKHC_23337:HG2_Ill_GATKHCSBGrefine_9773:HG2_Ill_Cortex_2515:HG2_Ill_250bpfermikitraw_19501;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18378:HG4_PB_assemblyticsfalcon_7682:HG4_Ill_svaba_18249:HG4_Ill_manta_3439:HG4_Ill_Krunchall_20159:HG4_Ill_GATKHC_23298:HG4_Ill_GATKHCSBGrefine_10077:HG4_Ill_Cortex_1038:HG4_Ill_250bpfermikitraw_19235:HG4_Ill_150bpfermikitraw_18524:HG3_PB_assemblyticsfalcon_7784:HG3_Ill_svaba_18360:HG3_Ill_manta_3292:HG3_Ill_Spiral_15149:HG3_Ill_Krunchall_19419:HG3_Ill_GATKHC_23190:HG3_Ill_GATKHCSBGrefine_9653:HG3_Ill_Cortex_1084:HG3_Ill_250bpfermikitraw_18920:HG3_Ill_150bpfermikitraw_18388:HG2_PB_assemblyticsfalcon_7769:HG2_PB_assemblyticsPBcR_7488:HG2_Ill_svaba_18216:HG2_Ill_manta_4038:HG2_Ill_SpiralSDKrefine_4828:HG2_Ill_Krunchall_19843:HG2_Ill_GATKHC_23337:HG2_Ill_GATKHCSBGrefine_9773:HG2_Ill_Cortex_2515:HG2_Ill_250bpfermikitraw_19501;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0724638;ClusterMaxSizeDiff=0.057971;ClusterMaxEditDist=0.15942;PBcalls=10;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=67;DistBack=3969;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=14:29031315-29031318;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1629.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:1/1:5:28:1:26:1/1:0:32:0:28:1/1:0:53:./.:.:.:.:.:.
chr14	29996014	HG2_PB_assemblyticsfalcon_7773	A	ACACATATATGTGGATATATATGTATGTATATACACATATATGTGGATATATATGTATGTATATACACATATAGGTGGATATATATGTATGTATATACACATATAGGTGGATATATATGTGTATATATAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6952:HG3_PB_assemblyticsfalcon_7791:HG2_PB_assemblyticsfalcon_7773:HG4_PB_assemblyticsfalcon_7687:HG2_PB_SVrefine2PB10Xhap12_10645:HG3_PB_SVrefine2Falcon1Dovetail_8920:HG2_PB_SVrefine2Falcon1plusDovetail_3410:HG4_PB_SVrefine2Falcon1Dovetail_8952:HG3_PB_pbsv_14378:HG4_PB_pbsv_14673;NumClusterSVs=10;ExactMatchIDs=HG2_PB_assemblyticsfalcon_7773;NumExactMatchSVs=1;ClusterMaxShiftDist=0.181102;ClusterMaxSizeDiff=0.173228;ClusterMaxEditDist=0.23166;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=129;DistBack=3;DistForward=43279;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=276;REFWIDENED=14:29995739-29996014;PctSeqSimilarity=0.9902;PctSizeSimilarity=0.9922;PctRecOverlap=0.8217;SizeDiff=1;StartDistance=23;EndDistance=23;GTMatch=0;TruScore=93;MatchId=1631.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:./.:18:18:2:18:./.:11:2:12:1:0/0:51:0:./.:.:.:.:.:.
chr14	30111405	HG2_PB_HySA_26775	T	TGGCGCCGGCAAAAGTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8953:HG2_PB_HySA_26775:HG3_PB_pbsv_14379:HG2_PB_PB10Xdip_9603:HG2_PB_pbsv_14735:HG2_PB_SVrefine2PB10Xhap12_10646:HG2_PB_SVrefine2Falcon1plusDovetail_3411:HG2_PB_SVrefine2Falcon2Bionano_7348;NumClusterSVs=8;ExactMatchIDs=HG2_PB_HySA_26775;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0780781;ClusterMaxSizeDiff=0.0749625;ClusterMaxEditDist=0.283582;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=339;DistBack=-13;DistForward=17;DistMin=-13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=324;REFWIDENED=14:30111101-30111424;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9971;PctRecOverlap=0.9941;SizeDiff=1;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=99;MatchId=1632.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:./.:31:18:0:7:0|1:24:0:1:7:0/1:24:15:0/1:9:28:.:.:.
chr14	31150808	HG4_PB_assemblyticsfalcon_7696	GCTCAATAGTTATAATGT	TTTTTTTTTTTTTTTTTTTTATTATTCTTTTTTTTATTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_9610:HG4_PB_assemblyticsfalcon_7696:HG2_PB_SVrefine2PB10Xhap12_10651:HG4_PB_SVrefine2PBcRDovetail_7316:HG4_PB_SVrefine2Falcon1Dovetail_8958;NumClusterSVs=5;ExactMatchIDs=HG4_PB_assemblyticsfalcon_7696;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0182027;ClusterMaxSizeDiff=0.0182027;ClusterMaxEditDist=0.0219744;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=6033;DistBack=3774;DistForward=31736;DistMin=3774;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:31150826-31150807;PctSeqSimilarity=0.9906;PctSizeSimilarity=0.9826;PctRecOverlap=0.9852;SizeDiff=-107;StartDistance=0;EndDistance=17;GTMatch=0;TruScore=98;MatchId=1633.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:41:0|1:11:1:2:13:./.:3:1:26:0:0/1:46:6:0/1:167:295:.:.:.
chr14	31444296	HG4_Ill_MetaSV_1510	T	TAAGAAAAAGACACGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9611:HG2_PB_HySA_26787:HG3_PB_pbsv_14384:HG4_PB_pbsv_14680:HG3_PB_HySA_22134:HG2_PB_pbsv_14741:HG4_PB_assemblyticsfalcon_7698:HG3_PB_assemblyticsfalcon_7803:HG2_PB_assemblyticsPBcR_7504:HG3_PB_SVrefine2PBcRDovetail_6957:HG2_PB_SVrefine2Falcon2Bionano_7353:HG4_PB_SVrefine2PBcRDovetail_7318:HG4_PB_SVrefine2Falcon1Dovetail_8960:HG4_Ill_manta_3443:HG4_Ill_MetaSV_1510:HG4_Ill_GATKHCSBGrefine_10087:HG3_PB_SVrefine2Falcon1Dovetail_8926:HG3_Ill_GATKHCSBGrefine_9661:HG2_PB_SVrefine2PBcRplusDovetail_3207:HG2_PB_SVrefine2PB10Xhap12_10653:HG2_Ill_MetaSV_1425:HG2_Ill_GATKHCSBGrefine_9783:HG2_10X_SVrefine210Xhap12_10172:HG2_PB_SVrefine2Falcon1plusDovetail_3416:HG2_PB_HySA_26786:HG4_PB_HySA_21393:HG2_PB_PB10Xdip_9612;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10172:HG2_Ill_GATKHCSBGrefine_9783:HG2_Ill_MetaSV_1425:HG2_PB_SVrefine2PB10Xhap12_10653:HG2_PB_SVrefine2PBcRplusDovetail_3207:HG3_Ill_GATKHCSBGrefine_9661:HG3_PB_SVrefine2Falcon1Dovetail_8926:HG4_Ill_GATKHCSBGrefine_10087:HG4_Ill_MetaSV_1510:HG4_Ill_manta_3443:HG4_PB_SVrefine2Falcon1Dovetail_8960:HG4_PB_SVrefine2PBcRDovetail_7318;NumExactMatchSVs=12;ClusterMaxShiftDist=0.135266;ClusterMaxSizeDiff=0.135266;ClusterMaxEditDist=0.190016;PBcalls=20;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=307;DistBack=45135;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=14:31444297-31444309;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1634.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:29:1/1:1:10:0:7:1/1:0:6:0:6:1/1:0:20:1/1:2:72:.:.:.
chr14	32669217	HG4_Ill_GATKHCSBGrefine_10091	C	CAAAACTCTGGGACCTCCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_22143:HG2_PB_pbsv_14746:HG4_PB_assemblyticsfalcon_7711:HG3_PB_pbsv_14390:HG4_PB_pbsv_14684:HG3_PB_assemblyticsfalcon_7814:HG4_PB_SVrefine2Falcon1Dovetail_8965:HG3_PB_SVrefine2Falcon1Dovetail_8932:HG4_Ill_MetaSV_1514:HG4_Ill_GATKHCSBGrefine_10091:HG3_PB_SVrefine2PBcRDovetail_6962:HG3_Ill_manta_3297:HG3_Ill_MetaSV_1541:HG3_Ill_GATKHCSBGrefine_9665:HG2_Ill_MetaSV_1429:HG2_Ill_GATKHCSBGrefine_9787:HG2_PB_SVrefine2Falcon1plusDovetail_3421:HG2_Ill_breakscan11_4552;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9787:HG2_Ill_MetaSV_1429:HG3_Ill_GATKHCSBGrefine_9665:HG3_Ill_MetaSV_1541:HG3_Ill_manta_3297:HG3_PB_SVrefine2PBcRDovetail_6962:HG4_Ill_GATKHCSBGrefine_10091:HG4_Ill_MetaSV_1514;NumExactMatchSVs=8;ClusterMaxShiftDist=0.213178;ClusterMaxSizeDiff=0.213178;ClusterMaxEditDist=0.255814;PBcalls=10;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=251;DistBack=12476;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=14:32669218-32669233;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:40:13:0|1:33:10:1:5:0|1:13:0:0:7:0/1:28:8:./.:.:.:.:.:.
chr14	34493338	HG2_Ill_MetaSV_1434	A	ATAAAGGCGGACTTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_21420:HG2_PB_pbsv_14753:HG4_PB_pbsv_14694:HG3_PB_pbsv_14396:HG2_PB_HySA_26817:HG4_Ill_MetaSV_1519:HG2_Ill_MetaSV_1434:HG3_Ill_MetaSV_1545:HG2_PB_SVrefine2PBcRplusDovetail_3216;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_MetaSV_1434:HG4_Ill_MetaSV_1519;NumExactMatchSVs=2;ClusterMaxShiftDist=0.151815;ClusterMaxSizeDiff=0.151815;ClusterMaxEditDist=0.225539;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=-8;DistForward=1;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=14:34493339-34493354;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:30:0|1:27:0:0:29:1|0:0:10:22:0:0/1:28:6:./.:3:45:.:.:.
chr14	34516670	HG2_10X_SVrefine210Xhap12_10190	GACT	TTCATGCTAAAGGACTCGTCCTCTTCTGCAGGCGTGCTCACAACTTCCGCCATCTGTGGTTCCTTTGATGTTTTCGAGAGTTTCTCCTCATTCTCCTGTCTATTCTCATTTTTCCTTCCTCACCTGTCTCTGTATCTCTCAGTCATTTGGCCCAATTTTAAAGGCACAGGATCAACATACCCCTGAACAAAAAGAGAGGAGAGCTGCCTTTGCCTCCCCAGCTACCAAACCCCATAGCTCTCGTCTTCCCCCATGGAGTGCTGGTCTTCCAGCTGTCCCCCAGCAGCAAGCTTCCTGGAAGCACAAGCCACTGACACATACGGAGTAAAAGATGCCCAGGGGCTGCCCAGGTGCCCTTGATAGAGTAACAAGATTTTTTTTGTGTGCGGGGTTGAGGGGGGGCGGGTAATTGTGTTAGTCTGTTTTGCATTGCTGTTAAGGAATACCTGAGACTGCGTAATTTATAATGAAAAGAGATTTATTTGGCTCACAGTTCTGCAGACTGTACAGGAAGCACGGCACAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1436:HG2_PB_HySA_26818:HG4_PB_HySA_21421:HG2_PB_SVrefine2Falcon1plusDovetail_3426:HG4_PB_assemblyticsfalcon_7729:HG4_PB_SVrefine2Falcon1Dovetail_8973:HG4_Ill_SVrefine2DISCOVARDovetail_10370:HG3_PB_assemblyticsfalcon_7827:HG3_PB_SVrefine2Falcon1Dovetail_8938:HG3_Ill_SVrefine2DISCOVARDovetail_10484:HG2_PB_SVrefine2PBcRplusDovetail_3219:HG2_PB_SVrefine2PB10Xhap12_10666:HG2_PB_SVrefine2Falcon2Bionano_7366:HG2_PB_PB10Xdip_9624:HG2_PB_PB10Xdip_9623:HG2_Ill_SVrefine2DISCOVARplusDovetail_3717:HG2_10X_SVrefine210Xhap12_10190:HG4_PB_SVrefine2PBcRDovetail_7328:HG3_PB_SVrefine2PBcRDovetail_6969:HG4_Ill_Spiral_1134:HG3_Ill_Spiral_15188:HG2_Ill_Spiral_974:HG2_PB_pbsv_14757:HG3_PB_pbsv_14400:HG4_Ill_MetaSV_1520:HG3_Ill_MetaSV_1547;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10190:HG2_Ill_SVrefine2DISCOVARplusDovetail_3717:HG2_PB_PB10Xdip_9623:HG2_PB_PB10Xdip_9624:HG2_PB_SVrefine2Falcon2Bionano_7366:HG2_PB_SVrefine2PB10Xhap12_10666:HG2_PB_SVrefine2PBcRplusDovetail_3219:HG3_Ill_SVrefine2DISCOVARDovetail_10484:HG3_PB_SVrefine2Falcon1Dovetail_8938:HG3_PB_assemblyticsfalcon_7827:HG4_Ill_SVrefine2DISCOVARDovetail_10370:HG4_PB_SVrefine2Falcon1Dovetail_8973;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.043152;ClusterMaxEditDist=0.16451;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=520;DistBack=-1;DistForward=11;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:34516674-34516669;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9962;PctRecOverlap=0.9905;SizeDiff=2;StartDistance=1;EndDistance=4;GTMatch=0;TruScore=99;MatchId=1637.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:20:0:16:1/1:0:24:0:11:1/1:0:29:./.:5:70:.:.:.
chr14	34627938	HG4_Ill_svaba_18292	A	AGCTGGGATTACAGGCGCCCCCCACCTGCCACCACACCCAGATGATTTTTGTATTTTTAGTAGATCCGCCCACCTCGGCCTCCCAAAGT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_19551:HG4_PB_pbsv_14698:HG3_PB_assemblyticsfalcon_7829:HG2_PB_pbsv_14758:HG4_Ill_svaba_18292:HG4_Ill_manta_3450:HG4_Ill_SVrefine2DISCOVARDovetail_10372:HG4_Ill_Krunchall_20212:HG4_Ill_GATKHC_23357:HG4_Ill_GATKHCSBGrefine_10099:HG4_Ill_250bpfermikitraw_19288:HG4_Ill_150bpfermikitraw_18577:HG3_PB_SVrefine2Falcon1Dovetail_8939:HG2_Ill_svaba_18257:HG2_Ill_manta_4050:HG2_Ill_SVrefine2DISCOVARplusDovetail_3719:HG2_Ill_Krunchall_19895:HG2_Ill_GATKHC_23391:HG2_Ill_GATKHCSBGrefine_9795;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19551:HG4_Ill_svaba_18292:HG4_Ill_manta_3450:HG4_Ill_SVrefine2DISCOVARDovetail_10372:HG4_Ill_Krunchall_20212:HG4_Ill_GATKHC_23357:HG4_Ill_GATKHCSBGrefine_10099:HG4_Ill_250bpfermikitraw_19288:HG4_Ill_150bpfermikitraw_18577:HG3_PB_SVrefine2Falcon1Dovetail_8939:HG2_Ill_svaba_18257:HG2_Ill_manta_4050:HG2_Ill_SVrefine2DISCOVARplusDovetail_3719:HG2_Ill_Krunchall_19895:HG2_Ill_GATKHC_23391:HG2_Ill_GATKHCSBGrefine_9795;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0659341;ClusterMaxSizeDiff=0.0659341;ClusterMaxEditDist=0.184783;PBcalls=4;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=88;DistBack=15836;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=14:34627922-34627954;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1638.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:38:0|1:38:5:7:32:1|0:1:22:19:0:0/1:32:25:./.:.:.:.:.:.
chr14	34952469	HG2_Ill_GATKHCSBGrefine_9796	T	TCAAGCCATTTTCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4553:HG4_PB_HySA_21436:HG4_PB_pbsv_14705:HG2_PB_pbsv_14762:HG2_PB_HySA_26827:HG2_PB_PB10Xdip_9631:HG2_PB_SVrefine2PB10Xhap12_10669:HG2_PB_SVrefine2Falcon1plusDovetail_3428:HG4_PB_assemblyticsfalcon_7735:HG4_Ill_MetaSV_1522:HG4_Ill_GATKHCSBGrefine_10101:HG2_Ill_MetaSV_1437:HG2_Ill_GATKHCSBGrefine_9796:HG4_PB_SVrefine2Falcon1Dovetail_8977:HG4_PB_SVrefine2PBcRDovetail_7333;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9796:HG2_Ill_MetaSV_1437:HG4_Ill_GATKHCSBGrefine_10101:HG4_Ill_MetaSV_1522;NumExactMatchSVs=4;ClusterMaxShiftDist=0.236667;ClusterMaxSizeDiff=0.233333;ClusterMaxEditDist=0.256667;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=3;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=14:34952470-34952485;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:32:./.:19:9:8:17:1|0:0:11:26:0:0/1:32:8:0/1:6:21:.:.:.
chr14	35457790	HG2_Ill_GATKHCSBGrefine_9798	T	TATATATATAACATATATATATATATAACATATATATAACATATATATATATAACATATATATAAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9729:HG3_PB_assemblyticsfalcon_7842:HG3_PB_pbsv_14407:HG3_Ill_Spiral_15200:HG3_Ill_GATKHC_23255:HG3_Ill_GATKHCSBGrefine_9674:HG2_Ill_GATKHCSBGrefine_9798:HG3_PB_HySA_22176:HG2_PB_HySA_26831:HG2_PB_PB10Xdip_9728;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9798:HG3_Ill_GATKHCSBGrefine_9674:HG3_Ill_GATKHC_23255;NumExactMatchSVs=3;ClusterMaxShiftDist=0.285714;ClusterMaxSizeDiff=0.285714;ClusterMaxEditDist=0.322581;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=5;DistForward=14;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=14:35457791-35457816;PctSeqSimilarity=0.94;PctSizeSimilarity=0.9155;PctRecOverlap=0.8732;SizeDiff=-6;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=90;MatchId=1640.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:30:0|1:16:3:0:32:./.:9:4:2:4:0/1:15:14:./.:.:.:.:.:.
chr14	35641659	HG2_Ill_Krunchall_19910	C	CTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8944:HG4_Ill_GATKHCSBGrefine_10106:HG4_PB_HySA_21450:HG3_Ill_GATKHC_23257:HG3_Ill_GATKHCSBGrefine_9676:HG3_Ill_250bpfermikitraw_18974:HG2_Ill_Krunchall_19910:HG2_Ill_GATKHC_23404:HG2_Ill_GATKHCSBGrefine_9800:HG2_Ill_250bpfermikitraw_19562:HG3_Ill_Krunchall_19482:HG4_PB_pbsv_14713;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19562:HG2_Ill_GATKHCSBGrefine_9800:HG2_Ill_GATKHC_23404:HG2_Ill_Krunchall_19910:HG3_Ill_250bpfermikitraw_18974:HG3_Ill_GATKHCSBGrefine_9676:HG3_Ill_GATKHC_23257;NumExactMatchSVs=7;ClusterMaxShiftDist=0.357616;ClusterMaxSizeDiff=0.357616;ClusterMaxEditDist=0.397351;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=39;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=81;REFWIDENED=14:35641612-35641692;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:26:0|1:35:5:5:23:./.:15:7:0:9:0/1:13:16:./.:.:.:.:.:.
chr14	36647932	HG2_PB_SVrefine2PB10Xhap12_10675	A	ACTTCCAATATTACAATATTCTAACATTCTTCGAATATTACAATATTCTAACATTCTTCGAATATTACAATATTCTAACATTCTTCGAATATTACAATATTCTAACATTCTTCGAATATTACAATATTCTAACATTCTTCGAATATTACAATATTCTAACATT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3434:HG2_PB_HySA_26836:HG4_PB_pbsv_14718:HG3_PB_pbsv_14413:HG2_PB_PB10Xdip_9741:HG2_PB_pbsv_14771:HG2_PB_PB10Xdip_9740:HG4_PB_SVrefine2Falcon1Dovetail_8984:HG3_PB_SVrefine2PBcRDovetail_6974:HG2_PB_SVrefine2PBcRplusDovetail_3224:HG2_PB_SVrefine2PB10Xhap12_10675:HG2_PB_SVrefine2Falcon2Bionano_7370;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3434:HG4_PB_SVrefine2Falcon1Dovetail_8984:HG3_PB_SVrefine2PBcRDovetail_6974:HG2_PB_SVrefine2PBcRplusDovetail_3224:HG2_PB_SVrefine2PB10Xhap12_10675:HG2_PB_SVrefine2Falcon2Bionano_7370;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0662651;ClusterMaxSizeDiff=0.0481928;ClusterMaxEditDist=0.230089;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=162;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=110;REFWIDENED=14:36647933-36648042;PctSeqSimilarity=0.997;PctSizeSimilarity=1;PctRecOverlap=0.9693;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=98;MatchId=1642.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:1/1:1:16:1:8:1/1:1:8:1:11:1/1:0:34:./.:.:.:.:.:.
chr14	36674744	HG3_PB_SVrefine2PBcRDovetail_6975	T	TAAGAATTTCCTGTTTAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAACATTAAAAAAAAAATGCAAAAAAGAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_21460:HG2_Ill_manta_4052:HG4_PB_pbsv_14720:HG3_PB_pbsv_14415:HG2_PB_pbsv_14772:HG2_Ill_MetaSV_1441:HG3_PB_assemblyticsfalcon_7856:HG2_PB_PB10Xdip_9743:HG2_PB_PB10Xdip_9742:HG4_Ill_MetaSV_1527:HG4_Ill_GATKHCSBGrefine_10108:HG3_PB_SVrefine2PBcRDovetail_6975:HG3_Ill_GATKHCSBGrefine_9678:HG2_PB_SVrefine2PBcRplusDovetail_3225:HG2_PB_SVrefine2PB10Xhap12_10676:HG2_10X_SVrefine210Xhap12_10201:HG3_Ill_MetaSV_1555:HG4_PB_SVrefine2Falcon1Dovetail_8985:HG4_PB_SVrefine2PBcRDovetail_7340:HG2_PB_SVrefine2Falcon2Bionano_7371:HG2_PB_SVrefine2Falcon1plusDovetail_3435:HG3_PB_SVrefine2Falcon1Dovetail_8948:HG3_PB_HySA_22186:HG2_PB_HySA_26837;NumClusterSVs=24;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_9678:HG3_PB_SVrefine2PBcRDovetail_6975:HG4_Ill_GATKHCSBGrefine_10108;NumExactMatchSVs=3;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.219512;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=252;DistBack=24608;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=14:36674745-36674760;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1643.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:86:1/1:0:23:0:11:1/1:0:5:0:5:1/1:0:10:./.:.:.:.:.:.
chr14	37014928	HG2_Ill_SVrefine2DISCOVARplusDovetail_3733	C	CATATATATATATATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG3_PB_pbsv_14417:HG2_PB_SVrefine2Falcon1plusDovetail_3438:HG3_PB_HySA_22189:HG3_Ill_Spiral_15213:HG3_Ill_FB_12592:HG3_Ill_150bpfermikitraw_18456:HG3_PB_SVrefine2PBcRDovetail_6976:HG3_Ill_SVrefine2DISCOVARDovetail_10505:HG3_Ill_GATKHC_23268:HG3_Ill_GATKHCSBGrefine_9680:HG2_Ill_SpiralSDKrefine_4878:HG2_Ill_SVrefine2DISCOVARplusDovetail_3733:HG3_PB_SVrefine2Falcon1Dovetail_8951:HG4_PB_SVrefine2Falcon1Dovetail_8987;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3733:HG2_Ill_SpiralSDKrefine_4878:HG3_Ill_GATKHCSBGrefine_9680:HG3_Ill_GATKHC_23268:HG3_Ill_SVrefine2DISCOVARDovetail_10505:HG3_PB_SVrefine2PBcRDovetail_6976;NumExactMatchSVs=6;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.222222;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=10;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=33912;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=14:37014929-37014945;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1644.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:17:1|0:0:18:19:1:0|1:19:0:0:6:0/1:23:8:./.:.:.:.:.:.
chr14	39502717	HG4_PB_SVrefine2PBcRDovetail_7345	A	ATAATAGGAGTGTCTTTATTCATAGGCTGATGGGATCACATAGGAGTTTATGCTATGAGATGAGATGAATCAGGATGGCGGCTAGTCACCACGAAGACTAACAATGGAATTAGAGGCTTGGTGCTTT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3743:HG2_10X_SVrefine210Xhap12_10211:HG4_PB_pbsv_14731:HG4_PB_HySA_21483:HG2_PB_HySA_26868:HG3_PB_pbsv_14430:HG2_PB_pbsv_14785:HG3_PB_HySA_22205:HG4_PB_SVrefine2PBcRDovetail_7345:HG4_PB_SVrefine2Falcon1Dovetail_8993:HG4_Ill_SVrefine2DISCOVARDovetail_10391:HG3_PB_SVrefine2PBcRDovetail_6983:HG3_PB_SVrefine2Falcon1Dovetail_8958:HG3_Ill_SVrefine2DISCOVARDovetail_10515:HG3_Ill_250bpfermikitraw_19012:HG2_PB_SVrefine2Falcon1plusDovetail_3444;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3743:HG4_PB_SVrefine2PBcRDovetail_7345:HG4_PB_SVrefine2Falcon1Dovetail_8993:HG4_Ill_SVrefine2DISCOVARDovetail_10391:HG3_PB_SVrefine2PBcRDovetail_6983:HG3_PB_SVrefine2Falcon1Dovetail_8958:HG3_Ill_SVrefine2DISCOVARDovetail_10515:HG3_Ill_250bpfermikitraw_19012:HG2_PB_SVrefine2Falcon1plusDovetail_3444;NumExactMatchSVs=9;ClusterMaxShiftDist=0.106061;ClusterMaxSizeDiff=0.106061;ClusterMaxEditDist=0.203008;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=126;DistBack=44239;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=129;REFWIDENED=14:39502718-39502846;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1645.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:17:./.:5:0:0:4:./.:0:12:2:0:0/1:14:21:./.:.:.:.:.:.
chr14	39533220	HG2_PB_PB10Xdip_9779	T	AAAAGTATATGCTATTTAGAAAGAAGCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCCCCTCTCCCTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCATGCCGAGCCAAAGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTTTTTTTTTGGTGGAGATGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATATGAGGAGCCCCTCTGCCTGGCTGCCCAGTGTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGAAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCACCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAACCCTGTCTGGGAGGTGAGGAGTGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCTGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGTGGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAACCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCATCTGGGAGGTGAGGGGCACTTCTGCCGGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAACTTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAATAAAAAATAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8959:HG2_PB_pbsv_14786:HG4_PB_pbsv_14732:HG2_PB_HySA_26870:HG3_PB_pbsv_14431:HG2_Ill_breakscan11_4554:HG4_PB_HySA_21484:HG2_PB_PB10Xdip_9779:HG2_PB_PB10Xdip_9778:HG2_PB_HySA_26869:HG4_PB_SVrefine2Falcon1Dovetail_8994:HG2_PB_assemblyticsfalcon_7855:HG2_PB_SVrefine2PB10Xhap12_10683:HG2_PB_SVrefine2PBcRplusDovetail_3233:HG2_PB_SVrefine2Falcon2Bionano_7376:HG4_PB_SVrefine2PBcRDovetail_7346;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_9779;NumExactMatchSVs=1;ClusterMaxShiftDist=0.104673;ClusterMaxSizeDiff=0.104673;ClusterMaxEditDist=0.209059;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=2891;DistBack=-18;DistForward=30184;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:39533221-39533219;PctSeqSimilarity=0.995;PctSizeSimilarity=0.9993;PctRecOverlap=0.9993;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1646.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:87:./.:3:10:0:2:./.:2:5:1:1:0/1:3:16:1/1:6:525:.:2936:.
chr14	39875083	HG2_PB_SVrefine2Falcon1plusDovetail_3445	T	AAAAAAGTTTTAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACGCAATAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCTGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGAACAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAACCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGCAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATGAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCAATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCTCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACATTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAACTAAAGAGCTTCTGCACAGCAAAAGAAAACTACCATCAGAGTGAACAGGCAAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAATGTGGCACATATACACCATGGAATATTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGAAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3445:HG2_PB_pbsv_14790:HG4_PB_pbsv_14736:HG4_PB_HySA_21491:HG3_PB_assemblyticsfalcon_7882:HG3_PB_SVrefine2Falcon1Dovetail_8960:HG4_PB_SVrefine2PBcRDovetail_7347:HG4_PB_HySA_21490:HG2_PB_HySA_26875;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3445;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0686849;ClusterMaxSizeDiff=0.0686849;ClusterMaxEditDist=0.17745;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=2993;DistBack=22925;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:39875084-39875082;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9997;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:46:0|1:32:1:0:26:0|1:37:0:0:6:0/1:23:13:0/1:99:327:.:3025:.
chr14	40312947	HG3_PB_SVrefine2PBcRDovetail_6985	A	AGATTCTTAGCAACTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4555:HG3_PB_HySA_22211:HG4_PB_assemblyticsfalcon_7778:HG3_PB_assemblyticsfalcon_7886:HG4_PB_pbsv_14738:HG3_PB_pbsv_14434:HG2_PB_pbsv_14792:HG2_PB_PB10Xdip_9781:HG2_PB_assemblyticsfalcon_7862:HG2_PB_PB10Xdip_9782:HG4_PB_HySA_21493:HG3_PB_HySA_22210:HG3_Ill_MetaSV_1560:HG2_PB_SVrefine2PB10Xhap12_10685:HG4_PB_SVrefine2Falcon1Dovetail_8996:HG4_Ill_MetaSV_1532:HG4_Ill_GATKHCSBGrefine_10131:HG3_PB_SVrefine2PBcRDovetail_6985:HG3_PB_SVrefine2Falcon1Dovetail_8962:HG2_Ill_MetaSV_1446:HG2_Ill_GATKHCSBGrefine_9810:HG2_PB_HySA_26876;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9810:HG2_Ill_MetaSV_1446:HG3_PB_SVrefine2Falcon1Dovetail_8962:HG3_PB_SVrefine2PBcRDovetail_6985:HG4_Ill_GATKHCSBGrefine_10131:HG4_Ill_MetaSV_1532:HG4_PB_SVrefine2Falcon1Dovetail_8996;NumExactMatchSVs=7;ClusterMaxShiftDist=0.169492;ClusterMaxSizeDiff=0.169492;ClusterMaxEditDist=0.241113;PBcalls=16;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=40785;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=14:40312948-40312966;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:1:22:0:24:1/1:0:13:0:7:1/1:0:15:1/1:1:87:.:.:.
chr14	40317396	HG4_Ill_GATKHCSBGrefine_10132	T	TGGTGCAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGAAGAAGAATCGCTTGAACCCGGGAGGCGGAGGTTACCGTGTGCCAAGACTGCACCCCTGCACTCCAGCCTGGCAACAGCACGAGACTCCATCTCAACAACAACAACAACAACAACAACAACAACAACAACAACAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9784:HG3_PB_pbsv_14435:HG2_PB_assemblyticsfalcon_7863:HG4_PB_assemblyticsfalcon_7779:HG3_PB_assemblyticsfalcon_7887:HG2_PB_pbsv_14793:HG4_Ill_manta_3456:HG4_Ill_MetaSV_1533:HG4_Ill_GATKHCSBGrefine_10132:HG3_PB_SVrefine2PBcRDovetail_6986:HG3_Ill_MetaSV_1561:HG2_PB_SVrefine2PB10Xhap12_10686:HG2_10X_SVrefine210Xhap12_10216:HG3_Ill_SVrefine2DISCOVARDovetail_10519:HG3_Ill_GATKHCSBGrefine_9693:HG2_Ill_SVrefine2DISCOVARplusDovetail_3747:HG2_Ill_MetaSV_1447:HG2_Ill_GATKHCSBGrefine_9811:HG4_PB_SVrefine2Falcon1Dovetail_8997:HG3_PB_SVrefine2Falcon1Dovetail_8963:HG2_PB_HySA_26877:HG2_PB_PB10Xdip_9783;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10216:HG2_PB_SVrefine2PB10Xhap12_10686:HG3_Ill_MetaSV_1561:HG3_PB_SVrefine2PBcRDovetail_6986:HG4_Ill_GATKHCSBGrefine_10132:HG4_Ill_MetaSV_1533:HG4_Ill_manta_3456;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0750552;ClusterMaxSizeDiff=0.0750552;ClusterMaxEditDist=0.194384;PBcalls=12;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=223;DistBack=4430;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=14:40317397-40317397;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1649.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:3:18:0:30:1/1:0:12:1:14:1/1:0:32:./.:.:.:.:.:.
chr14	41313519	HG3_Ill_GATKHCSBGrefine_9695	A	ATATATATACACACGTATATATACATATATATATATATATATATATATACCCACATATATGT	20	PASS	ClusterIDs=HG3_PB_pbsv_14437:HG3_Ill_manta_3309:HG2_PB_pbsv_14794:HG2_PB_HySA_26881:HG3_Ill_Spiral_15240:HG3_Ill_GATKHC_23306:HG3_Ill_GATKHCSBGrefine_9695:HG2_Ill_GATKHC_23457:HG2_Ill_GATKHCSBGrefine_9812:HG3_PB_HySA_22215:HG3_Ill_150bpfermikitraw_18491:HG2_Ill_scalpel_13870;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9812:HG2_Ill_GATKHC_23457:HG3_Ill_GATKHCSBGrefine_9695:HG3_Ill_GATKHC_23306;NumExactMatchSVs=4;ClusterMaxShiftDist=0.112;ClusterMaxSizeDiff=0.09375;ClusterMaxEditDist=0.269841;PBcalls=4;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=191042;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=103;REFWIDENED=14:41313520-41313622;PctSeqSimilarity=0.8976;PctSizeSimilarity=0.7439;PctRecOverlap=0.506;SizeDiff=-21;StartDistance=-30;EndDistance=-30;GTMatch=0;TruScore=71;MatchId=1650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:51:./.:2:40:30:10:./.:0:17:2:8:0/1:5:13:./.:.:.:.:.:.
chr14	41376752	HG2_10X_SVrefine210Xhap12_10218	TTTTA	CAATGCAATTTTATCTTCTAGATATAAAATATACAATGCAATTTTATCTTCTAGATGTTCTGAGCTATTTTCCAACTAAGACGTCTCTTTAACCTGTAACAGTTAACTACTTTAAGGTGGAGCTTTTAAGAGTATGTTTTCAGAATCTAAGTGAAAATGT	20	PASS	ClusterIDs=HG2_PB_HySA_26885:HG4_PB_assemblyticsfalcon_7784:HG4_PB_SVrefine2Falcon1Dovetail_8998:HG3_Ill_SVrefine2DISCOVARDovetail_10520:HG2_PB_assemblyticsfalcon_7868:HG2_PB_SVrefine2PB10Xhap12_10687:HG2_PB_PB10Xdip_9786:HG2_PB_PB10Xdip_9785:HG2_Ill_SVrefine2DISCOVARplusDovetail_3750:HG2_10X_SVrefine210Xhap12_10218:HG2_PB_pbsv_14795:HG2_Ill_MetaSV_1449:HG3_PB_pbsv_14438;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10218:HG2_Ill_SVrefine2DISCOVARplusDovetail_3750:HG2_PB_PB10Xdip_9785:HG2_PB_PB10Xdip_9786:HG2_PB_SVrefine2PB10Xhap12_10687:HG2_PB_assemblyticsfalcon_7868:HG3_Ill_SVrefine2DISCOVARDovetail_10520;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0501567;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.165605;PBcalls=9;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=155;DistBack=-5;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:41376757-41376751;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9873;PctRecOverlap=0.9686;SizeDiff=-2;StartDistance=2;EndDistance=6;GTMatch=0;TruScore=98;MatchId=1651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:84:1/1:3:20:1:29:1/1:0:21:0:38:1/1:0:13:./.:.:.:.:.:.
chr14	43241809	HG2_Ill_SVrefine2DISCOVARplusDovetail_3765	T	TGGATTTATGGCTGAATTCTATTAGAGGTACAAAGAGTAGCTGGTAACATTTCTTCTAAAACTATTCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10228:HG3_PB_pbsv_14451:HG3_PB_HySA_22245:HG2_PB_HySA_26909:HG2_PB_pbsv_14806:HG4_PB_HySA_21522:HG4_PB_pbsv_14753:HG2_PB_PB10Xdip_9790:HG2_PB_PB10Xdip_9789:HG4_PB_SVrefine2PBcRDovetail_7353:HG4_Ill_svaba_18348:HG4_Ill_manta_3462:HG4_Ill_SVrefine2DISCOVARDovetail_10404:HG4_Ill_Krunchall_20293:HG4_Ill_GATKHC_23440:HG4_Ill_GATKHCSBGrefine_10145:HG4_Ill_250bpfermikitraw_19360:HG4_Ill_150bpfermikitraw_18643:HG3_PB_SVrefine2PBcRDovetail_6994:HG3_Ill_svaba_18468:HG3_Ill_manta_3315:HG3_Ill_SVrefine2DISCOVARDovetail_10537:HG3_Ill_Krunchall_19559:HG3_Ill_GATKHC_23334:HG3_Ill_GATKHCSBGrefine_9711:HG3_Ill_250bpfermikitraw_19053:HG3_Ill_150bpfermikitraw_18521:HG2_PB_SVrefine2PB10Xhap12_10690:HG2_Ill_svaba_18319:HG2_Ill_manta_4061:HG2_Ill_SVrefine2DISCOVARplusDovetail_3765:HG2_Ill_Krunchall_19979:HG2_Ill_GATKHC_23491:HG2_Ill_GATKHCSBGrefine_9818:HG2_Ill_250bpfermikitraw_19632:HG2_Ill_150bpfermikitraw_18501;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10228:HG4_PB_SVrefine2PBcRDovetail_7353:HG4_Ill_svaba_18348:HG4_Ill_manta_3462:HG4_Ill_SVrefine2DISCOVARDovetail_10404:HG4_Ill_Krunchall_20293:HG4_Ill_GATKHC_23440:HG4_Ill_GATKHCSBGrefine_10145:HG4_Ill_250bpfermikitraw_19360:HG4_Ill_150bpfermikitraw_18643:HG3_PB_SVrefine2PBcRDovetail_6994:HG3_Ill_svaba_18468:HG3_Ill_manta_3315:HG3_Ill_SVrefine2DISCOVARDovetail_10537:HG3_Ill_Krunchall_19559:HG3_Ill_GATKHC_23334:HG3_Ill_GATKHCSBGrefine_9711:HG3_Ill_250bpfermikitraw_19053:HG3_Ill_150bpfermikitraw_18521:HG2_PB_SVrefine2PB10Xhap12_10690:HG2_Ill_svaba_18319:HG2_Ill_manta_4061:HG2_Ill_SVrefine2DISCOVARplusDovetail_3765:HG2_Ill_Krunchall_19979:HG2_Ill_GATKHC_23491:HG2_Ill_GATKHCSBGrefine_9818:HG2_Ill_250bpfermikitraw_19632:HG2_Ill_150bpfermikitraw_18501;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0863309;ClusterMaxSizeDiff=0.0719424;ClusterMaxEditDist=0.242857;PBcalls=11;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=67;DistBack=14338;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=67;REFWIDENED=14:43241810-43241876;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1654.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:84:1/1:0:19:1:14:1/1:1:24:1:23:1/1:1:42:./.:.:.:.:.:.
chr14	44886696	HG3_Ill_SVrefine2DISCOVARDovetail_10542	A	TTCCTGGTCAGTAAGACCTCAAAAGGTTAAATACTAACAACTTACACACCTTAAATGTTTATCAAAAATTACTGGGCAATATTAATTGGCTTCACTCCACCTTGGGCATAACTACTGATAAGTTACAAAACCTGTTTTCTACCCTAAAGGGCAATATAGCCCTACACTGTCCCAGGTATTTAACTCCTGCAGCAAAAAGGGAAATTGAGGAAGTAGAGCAAGCTCTTTCTCGGAGGCAACTAGATCGCATAGACCCATGATATTCAGTTCAATAGTTTGTTTTTCTTAGTAAACATTCCCTAACAGGATTAATAAGATAGATGGCCCCAGGGCTATGCTTCCTAGAATGGGTTTTTTGCTCACTTACCAGGACTAAAACACTATCTCCCTACATCCAGCTAGTTAGTAAAGTTATCTATACAGGCCACAGATGATGCCATCAGTTGCTAGGTTATGACCCTGAGGTCATAAGAATTCCTTGAGTAAAAAGTAATTCGAAGCAGTATTGCCCT	20	PASS	ClusterIDs=HG2_PB_HySA_26922:HG4_PB_assemblyticsfalcon_7814:HG4_PB_SVrefine2Falcon1Dovetail_9003:HG3_PB_assemblyticsfalcon_7927:HG3_PB_SVrefine2Falcon1Dovetail_8973:HG2_PB_assemblyticsPBcR_7617:HG2_PB_SVrefine2PBcRplusDovetail_3235:HG3_PB_SVrefine2PBcRDovetail_6998:HG3_Ill_SVrefine2DISCOVARDovetail_10542:HG2_10X_SVrefine210Xhap12_10234:HG2_PB_pbsv_14811:HG3_PB_pbsv_14458:HG3_Ill_GATKHCSBGrefine_9715:HG2_Ill_GATKHCSBGrefine_9822:HG3_Ill_MetaSV_1568:HG2_Ill_MetaSV_1451;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10234:HG3_Ill_SVrefine2DISCOVARDovetail_10542:HG3_PB_SVrefine2PBcRDovetail_6998;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0655106;ClusterMaxSizeDiff=0.061657;ClusterMaxEditDist=0.142995;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=511;DistBack=0;DistForward=350;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:44886697-44886695;PctSeqSimilarity=0.999;PctSizeSimilarity=1;PctRecOverlap=0.9961;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1656.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:20:0|1:39:0:0:27:1|0:0:8:38:0:0/1:30:10:0/1:15:57:.:.:.
chr14	45472969	HG4_Ill_250bpfermikitraw_19378	C	CATGTATGTATATGTATACATATACATGCATGTATGTATGTATATGTATACATATACATGCATGT	20	PASS	ClusterIDs=HG3_PB_HySA_22264:HG4_PB_pbsv_14763:HG3_PB_pbsv_14461:HG4_PB_HySA_21535:HG4_Ill_GATKHCSBGrefine_10151:HG3_Ill_GATKHCSBGrefine_9718:HG2_Ill_GATKHCSBGrefine_9829:HG3_Ill_manta_3318:HG3_Ill_Spiral_15285:HG2_Ill_manta_4064:HG4_PB_assemblyticsfalcon_7820:HG3_PB_assemblyticsfalcon_7932:HG4_Ill_svaba_18360:HG4_Ill_Krunchall_20313:HG4_Ill_250bpfermikitraw_19378:HG4_Ill_150bpfermikitraw_18661:HG3_Ill_svaba_18489:HG3_Ill_Krunchall_19582:HG3_Ill_250bpfermikitraw_19076:HG3_Ill_150bpfermikitraw_18547:HG2_Ill_svaba_18334:HG2_Ill_Krunchall_19998:HG2_Ill_250bpfermikitraw_19653:HG2_Ill_150bpfermikitraw_18523;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18523:HG2_Ill_250bpfermikitraw_19653:HG2_Ill_Krunchall_19998:HG2_Ill_svaba_18334:HG3_Ill_150bpfermikitraw_18547:HG3_Ill_250bpfermikitraw_19076:HG3_Ill_Krunchall_19582:HG3_Ill_svaba_18489:HG4_Ill_150bpfermikitraw_18661:HG4_Ill_250bpfermikitraw_19378:HG4_Ill_Krunchall_20313:HG4_Ill_svaba_18360;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.179104;PBcalls=6;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=3;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=41;REFWIDENED=14:45472970-45473010;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:20:0|1:35:2:1:18:1|0:0:31:19:0:0/1:33:33:./.:.:.:.:.:.
chr14	45858989	HG2_PB_PB10Xdip_9796	C	GCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTTGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCGGCCCCCCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6999:HG2_PB_SVrefine2Falcon1plusDovetail_3448:HG3_PB_pbsv_14462:HG2_PB_PB10Xdip_9797:HG2_PB_pbsv_14814:HG2_PB_PB10Xdip_9796:HG4_PB_pbsv_14765:HG4_PB_SVrefine2PBcRDovetail_7358:HG3_PB_SVrefine2Falcon1Dovetail_8975:HG4_PB_SVrefine2Falcon1Dovetail_9006:HG2_PB_SVrefine2PB10Xhap12_10695;NumClusterSVs=11;ExactMatchIDs=HG2_PB_PB10Xdip_9796:HG2_PB_PB10Xdip_9797;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0707965;ClusterMaxSizeDiff=0.0619469;ClusterMaxEditDist=0.225166;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=226;DistBack=-209;DistForward=67837;DistMin=-209;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=589;REFWIDENED=14:45858941-45859529;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9912;PctRecOverlap=0.9913;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1658.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:48:1/1:3:31:2:8:./.:1:0:0:1:./.:1:4:./.:.:.:.:.:.
chr14	47836088	HG3_Ill_GATKHCSBGrefine_9728	A	AATGAAATTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_Ill_GATKHCSBGrefine_9728:HG2_PB_pbsv_14818:HG2_PB_HySA_26947:HG2_PB_SVrefine2PB10Xhap12_10700:HG4_PB_assemblyticsfalcon_7839:HG3_PB_pbsv_14470:HG3_PB_assemblyticsfalcon_7954:HG2_PB_assemblyticsfalcon_7926:HG2_Ill_breakscan11_4558:HG2_Ill_MetaSV_1455:HG2_PB_SVrefine2Falcon1plusDovetail_3451;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_9728;NumExactMatchSVs=1;ClusterMaxShiftDist=0.147147;ClusterMaxSizeDiff=0.147147;ClusterMaxEditDist=0.212518;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=328;DistBack=3;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=14:47836089-47836102;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9939;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:39:0|1:16:5:3:28:1|0:0:10:16:0:0/1:36:11:0/1:5:29:.:.:.
chr14	48323967	HG2_PB_SVrefine2Falcon1plusDovetail_3452	C	CTTCTCTGGTCTCTGACTGCTTCCAGAATGGGTAAAAGAGGGCAAGAAAAGATGTGACTACAATAGTCTGGGACCCAAACAGATTAAAGTATGAGATATTTCATAGCATAAGCAGTATATTATTAATCATATTTCCTAGTACATAATACATGCTCAATAAGAAGTTATTGCATTAATTTAACTGAAGACTGAACTAGAATTATCTGAGTGAAATTGCACAGGATCTAGGAGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8979:HG2_PB_pbsv_14819:HG4_PB_assemblyticsfalcon_7842:HG2_PB_assemblyticsfalcon_7931:HG3_PB_assemblyticsfalcon_7956:HG3_PB_pbsv_14471:HG2_Ill_breakscan11_4559:HG2_PB_SVrefine2PB10Xhap12_10701:HG4_PB_SVrefine2Falcon1Dovetail_9010:HG3_Ill_GATKHCSBGrefine_9730:HG2_PB_SVrefine2Falcon1plusDovetail_3452:HG2_Ill_MetaSV_1456:HG2_Ill_GATKHCSBGrefine_9833;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9833:HG2_Ill_MetaSV_1456:HG2_PB_SVrefine2Falcon1plusDovetail_3452:HG3_Ill_GATKHCSBGrefine_9730;NumExactMatchSVs=4;ClusterMaxShiftDist=0.100877;ClusterMaxSizeDiff=0.100656;ClusterMaxEditDist=0.204593;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=231;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=14:48323968-48323968;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1660.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:61:0|1:25:0:2:35:1|0:0:38:31:0:0/1:32:31:./.:.:.:.:.:.
chr14	49105710	HG2_Ill_svaba_18359	A	ATTTGTCTATAGATAGATGTGTGCATATTTATATATACATAATATATAAACAGAAGGGAATATGTACAATAAGGTATTCAGAATGGAAATCATCTTAGGTAATATAATCTTAATGCTTTAATATTTGGTGAAAAATTATTATTTTCAAATAATAATGTAACAATGTAACATTATTACAATGTAATAATCTAACATTGTAAAATAATATTCTAATAAT	20	PASS	ClusterIDs=HG2_Ill_Spiral_979:HG4_PB_assemblyticsfalcon_7848:HG2_PB_pbsv_14821:HG4_PB_pbsv_14772:HG3_PB_pbsv_14474:HG2_PB_assemblyticsfalcon_7936:HG4_PB_SVrefine2Falcon1Dovetail_9013:HG3_PB_SVrefine2Falcon1Dovetail_8982:HG4_PB_SVrefine2PBcRDovetail_7364:HG4_Ill_svaba_18385:HG4_Ill_SVrefine2DISCOVARDovetail_10420:HG4_Ill_MetaSV_1541:HG4_Ill_GATKHCSBGrefine_10160:HG3_Ill_svaba_18525:HG3_Ill_GATKHCSBGrefine_9733:HG2_Ill_svaba_18359:HG2_Ill_MetaSV_1458:HG2_Ill_GATKHCSBGrefine_9835:HG2_PB_SVrefine2Falcon1plusDovetail_3454:HG4_Ill_Spiral_1144:HG3_Ill_Spiral_15313;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9835:HG2_Ill_MetaSV_1458:HG2_Ill_svaba_18359:HG3_Ill_GATKHCSBGrefine_9733:HG3_Ill_svaba_18525:HG4_Ill_GATKHCSBGrefine_10160:HG4_Ill_MetaSV_1541:HG4_Ill_SVrefine2DISCOVARDovetail_10420:HG4_Ill_svaba_18385:HG4_PB_SVrefine2PBcRDovetail_7364;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0636364;ClusterMaxSizeDiff=0.0636364;ClusterMaxEditDist=0.137778;PBcalls=9;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=216;DistBack=-24;DistForward=2;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=14:49105711-49105714;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1661.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:36:0|1:41:1:0:35:1|0:0:21:17:0:0/1:30:4:./.:.:.:.:.:.
chr14	50192040	HG2_PB_SVrefine2PB10Xhap12_10710	A	AGCAAAAATGAGGAGTTCTGAGCATGTACTTTAGGGAAACAGATTTTAAAATGTAAACATCATTCCACCCTCTGCAATTTTAAAAAAGATAATCCTTAGAGAAAATTGAAAGATTGTCAACAAGTAAAATTATGATTCACTGCAAACAATACTATGAGAAGAAAAGTTGCCAGGTGGTGCTGCTACTGGTCTGGGGACCACGCTTTGGGAGGTACCCATGTATCCATTGGCTTTGTGACTATGGTAACACTTAACTCTATTTTTGTAAGGTGTCTGTTATTTTACCAGTAAATATGTGATAAAACTATAAAAATAATAATGTAATAAACT	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7011:HG2_PB_pbsv_14830:HG4_PB_pbsv_14780:HG3_PB_pbsv_14484:HG4_PB_HySA_21577:HG2_PB_PB10Xdip_9829:HG2_PB_PB10Xdip_9828:HG4_Ill_MetaSV_1542:HG3_Ill_MetaSV_1577:HG2_Ill_MetaSV_1462:HG3_PB_HySA_22329:HG4_PB_SVrefine2PBcRDovetail_7370:HG4_PB_SVrefine2Falcon1Dovetail_9019:HG4_Ill_SVrefine2DISCOVARDovetail_10430:HG3_PB_SVrefine2Falcon1Dovetail_8987:HG3_Ill_SVrefine2DISCOVARDovetail_10575:HG2_PB_SVrefine2PB10Xhap12_10710:HG2_PB_SVrefine2Falcon1plusDovetail_3462:HG2_Ill_SVrefine2DISCOVARplusDovetail_3794:HG2_10X_SVrefine210Xhap12_10250;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10250:HG2_Ill_SVrefine2DISCOVARplusDovetail_3794:HG2_PB_SVrefine2Falcon1plusDovetail_3462:HG2_PB_SVrefine2PB10Xhap12_10710:HG3_Ill_SVrefine2DISCOVARDovetail_10575:HG3_PB_SVrefine2Falcon1Dovetail_8987:HG4_Ill_SVrefine2DISCOVARDovetail_10430:HG4_PB_SVrefine2Falcon1Dovetail_9019:HG4_PB_SVrefine2PBcRDovetail_7370;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0449775;ClusterMaxSizeDiff=0.041791;ClusterMaxEditDist=0.208517;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=329;DistBack=6590;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=316;REFWIDENED=14:50192041-50192356;PctSeqSimilarity=0.9973;PctSizeSimilarity=1;PctRecOverlap=0.8936;SizeDiff=0;StartDistance=-35;EndDistance=-35;GTMatch=0;TruScore=96;MatchId=1662.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:16:0:11:1/1:1:33:0:29:1/1:0:40:1/1:2:22:.:.:.
chr14	50227844	HG3_Ill_SVrefine2DISCOVARDovetail_10576	G	GTTGAACTAATTTACACTCCCACCAACAGTGTAAAAGTGTCTCTATTCCTCCACATCCTCTCCAGCATCTGTTGTTTCCTGACTTTTTAGTGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTAATGACGAGTGATGATGAGCTTTTTTTCATATGTTTGTTGGCCGCATAAATGTCTTCTTTTGAGAAATGTCTGTTCATATTCTTCACCCACTTTTTGATGGAGTGGTTTGTTTTCTTCCTGTAAATTTGTTTAAGTTCTTTGTAGATTCTGGATGTTAGCCCTTTGTCAGATGAGTAGATTGCAAAAATTTTCTCCCATTCTACAGGTTGCCTGTTCACTGTGATGATAGTTTGCTTTGCTGTGCAGAAGCTCTTCAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTCCCTTTGCTTTTGGTGTTTTAGTCATGAAGTCCTTGCCCATGCCTATGTCCTGAATTGCCTCGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTTACATTTAAGTCTTTAATCCAAAATCTTGAGTTAGTTTTTGTATAATGTGTAAGGAAGGGGTCCAGTTTCAGTTTTCTGCATATGGCTAGCCAGTTTTCCCAACACCATTTATTAAATAGGGAATCCTTTCTCCATTGCTTGTTTTTCTCAGGTTTATCAAAGATCAGATGTTTGTAGATGTGTGGTGTTATTTCTGAAGCCTCTATTCTGTTCCATTGGTCTATATATCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATATTTTGAAGTCAGGTAGCATGATGCCTCCAGCTTTGTTCTTTTTGCTCAGGATTGTCTTGGATATATGGGCTCTTTTTTGGTTCCACATGAAATTTAAAATAGTTTTTTCTAATTCTGTGAAGAAAGTCAATAATAGCTTGATGGGGATGGCATTGAACCTATAAATTACTTTGGACAGTATGGCCATTTCCATGATATTGATTCTTCCTACCCATGAGCATGGAATGTTTTTCCATTTATTTGTGTCCTCAATTATTTCCTTGAGAAGTGGTTTGTAATTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGCTGTATTCCTAGGTATTTTATTCTCTTTGTAGCAATTGTGAATGGGAGTTCACTCATAATTTGGCTGTTTGTCTGTTATTGGTGTTTAGGAATGCTTGTGATTTTTGCACATTGATTTTGTACCCTGAGACTTTCCTGAAGTTGCTTATCAGCTTAAGGAGGTTTTGGACTGAGACAATGGGTTTTTTTTTTTCTTTCTTTTTTTTGAGATGGAGTTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCACTATCTTGGCTCACCACAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTCGGATTACAGGCATGCACCTCCATGCCCGGCTAATTTTATATTTTTAGTAGAGACGGGGTTTCTCCATGTTGATCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCCGGGATTACAGACGTGAGCCACTGCACCTGGCTGACGATGGGGTTTTCTAAATATACAATCATGTCATCTGCAAACAGAGACAATTTGACTTCCTCTTTTCCTATTTGAATGCCCTTTATTTCTTTCTCTTGCCTGAGTGCCCTGGCCAGAACTTCCAATACTATGTTGAATAAAAGTGGTGAGAGAGGGCATCCTTGTCTTGTGACAGTTTTCAAAGGGAATACTTCCAGTTTTTATCCAGTCAGTATGATATTGGCTGTGGGTTTGTCATAAATAGCTCTTATTATTTTGAGATACGTCCCATCAATTCCTAGTTTATTGAGAGTTTTTAGCATGAAGGGGTGTTGAATTTTATCAAAGGCCTTTTCTGCGTCTATTAAGATAATTATGTGGTTTTTGTCATTGGTTCTGTTTATGTGATGGATTACATTTATTGATTTGCATATGTTGAGCCAGCCTTGCATCCCAGGGATGAAGCCGACTTGATCATGGTGGATAAGCTTTTAGATGTGCTGCTTGATTCGGTTTGCCAGTATTTTATTGAGGATTTTCACATCGATATTCATCAGGGATATTGGCCTGAAATTTTCTTTTTTTTGTTGTTGTATCTCTGCCAGTCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCTCTCTTTTTGTATTCTTTGGAATAGTTTCAGAAGGAATGGTACCAGCTCCTCTTTGTACCTCTGGTAGAATTTGGCTGTGAATCCATCTTGTGCCGGACTTTTTTTGGTTGGTAGGCTGTTAATTACTGCCTCAATTTTAGAACTTGCTATTGGTCTATTCAGGGATTTGACTTCTTCCTGGTTTAGTCTTGGGAGGGTGTATGTGTCCAGAAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTTTATAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCAGTGGTGATATCCCCTTTATCTTTTTTTATTGCATCTATTTGATTCTTCTCTCTTTTTTTCTTTATTCGTCTGGCTAGTGGTCTATGTATTTTGTTGATCTTTTCAAAAAAACAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATCTCCTTCAGTTCTGCTCTGATCTTAGTTATTTCTTGCCTTCTGCTATCTTTTGAATGTGTTTGCTCTTGCTTATCTAGTTCTTTCAATTGTGATGTTAGAGTGTCAATTTTAGATCTTTCCTGCTTCTTTTGTGGGCATTTAGTGCTATAAATTTCCCTCTATATGCTGCTTTAAATGTGTTTCAGAGATTCTGGTACGTTGTGTCTTTGTTCTCATTAGTTTCAAAAAGCATCTTTATTTCTGCCTTCCTTTCATTATTTACCCAGTAATTATTCAGGAGCAGGTTGTTCAGTTTCCACGTAGTTGTACGGTTTTGAGTGAGTTTCTTTTCTTTTTTTTTTCAGACAAAGTCTCGCTCTGTTGCCTAGGCTGCAGTGGCAGGATCTCAGCTCACTACAACCTTCGCCTCCCGGGTTCAAGTGATTCTTCTGCCTCAGCCTCCCAAGTAACTGGGATTACAGGTGCCCACCACCATGCCCAGCTAATTTTTGTATTTTCAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCAAACTCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAACGTGCTGGGATTACAGGCATGAGCCACTGCACCCAGCCTTGAGTGAGTTTCTTAATCCTGAGTTCTAATTTGATTGCACTGTGGTCTGAAAGACTGTTATGATTTCCGTTCTTTTGCATTTGCTGAGGAGTGTTTTACTTTCAGTTATGTGGTCAATTTTAGAATAAGTGTGATATGGTGCTGAGAAGAATGTATATTCTGTTGATTGGGGGTGGAGAGTTCTGTAGATGACTATTAGGTTTGCTTGGTCCAGAGCTGAGTTCAAGTCCTGAATATTCTTGTTAATTTTCTGTCTCATTGATCTGTCTAATACTGACAGTGGGGTGTTAATGTCTCCCGCTATTATTGTGTGGGAGTCTAAGTCTCTTTGTAGGTCTCTAAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATGTATATTTAGGATAGTTAGCTCTTCTTGTTGCATTGACCCCTTTACCATTATGTAATGGCATTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGAATAGGATTGCAACCCCTGCTTTTTTTGCTTTCCATTTGCTTGGTAAATATTCCTCCATCCCTTTATTTTGAGCCTATGTGCATCTTTGCACGTGAGATGGGTCTCCTAAATACAGCACACCGAAGGGTCTTGACTATCCAATTTGCTAGTCTGTGTCTTTTAATTGGGGCATTTATCCCATTTACATTTAAGGTTAATATTGTCATGTGTGAATTTGATCCTATCATTATGATGCTAGCTGGTTATTTTGCCCGTTAGTTGATACAGTTTCTTCATAGCATCAATGGCCTTTACAATTTGGTATGTTTTTGCAGTGGCTGGTACCGGTTTTTCTTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTGTAAGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTCTCCTTTGCTTATGGAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAACAATGTTGAATATTGGCCCCTACTCTCTTCTGGCTTGTAGGGTTTCTGCAGAGAGATCCACTGTTAGTCTGATGGGCTTCCCTTTGTGGGTAACCCAACCTTTCTCTCTGGCTGCCCTTAACATTTTTTTCCTTCATTTCAACCTTTGTGAATCTGATGAATATGTGTCTTGGGGTTGCTGTTCTTAAGGTGTATCTTTGTGGTGGTCTCTGTATTTCCTGAATTTGAATGTTGTCCTGTCTTGCTAGGTTGGGGGAGTTCTCCTGGATAATATCCTGAAGAGTGTTTTCCAGCTTGGTTCCATTCTCCCCATCACTTTCAGGTACATCATCAAACGTAGATTTGGTCCCATATTTCTTGGAGGCTTTGTTCATTCATTTTCATTCTTTTTTCTCTAATCTTGTCTTCTCGCTTTATTTCATTAAGTTGATCTTCAATCTCTGATAGCCTTTCTTCTGCTTGATCGATTCTGCTATTGATACTTACGTATGCTTCACGAAGTTCTTGTGCTGTGTTTTTCAGCTCCATTGGGTCGTTTATCTTCTTCTCTAAACTGGTTATTCTAGTTAGCAATTCCTCTAACCTTTTTTCAAGGTTCTTGGCTTCCTTGCATTGGGTTAGAACACGCTTCTTTAGCTCAGAGGAGTTTGTTGTTACCCACTTTCTGAAGCCTACTTCTGTCAACTCGTCAAACTCATTCTCCATCCAGTTTTTTTCCCTTTCTGGCAAGGAGTTGTGATCCTTTGGAGGAGAGGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTTTGTGCTGGTTTCTCCCCATCTTCGTGGATTTATCTACCTTTGGTCTTTGATGTTGGTGACCTTCGGAAGGGGTCTCTGAGTGGACATCCTTTTTGTTGATGTTGATGCTATTCCTTTTTGTTTGATAGTTTTCCTCCTAATAGTCAGGCCCCTCTGCTTCAGGTCTCCTGAAGTCTGCTGGAAGTCCACTCCAGACCCTGTTTTCCTGGGTATTACCAGCAGAGGCTGCAGAATAGCAAAGATTGCTGCCTGTTCCTTCCTCTGGAAGCTTTGTCCCAGAGGGGCACCCGCCAGATGCCAGCCAGAGCTCTCCTGTATGAGGTGTCTGTCGGCCCCTACTGGGAGGTGTCTCCCAGTCAGGAGACACGGGGGTCAGGAACTCACTTGAGGAGGTAGTCTGTCCCCTAGCAGAGCTCAAATGCTGTGCTGGGAGATCCACTGCTCTCTTCAGAGCTGCCAGACAGGGACGTTTAAGTCTGCTGAAGCTGCATCCACAGCTGCCCCTTCCCCCAGGTGCTCTGTCCCAGGGAGAGGGGCAGTTTATCTATGAGCCCCTGACTGGGGCTGCTGCCTTTTTTTCAGAGATGCCCTGCCCAGAGAGGAGGAATCTAGAGAGGCAGTCTGGCCACAGTGGTCTTGCTGAGCTGTGGTGGGTTCCACCCAGTTTGAATTTCCCGGTGGCTTTGTTTACACTGTGAGGGTGAACAGCCTACTCAAGCCTCAGCAATGTTGGGTGCCCCTCCCCCTACCAAGCTCAAGCATCCCAGGTCCACCTCAGACTGCTATGCTGGCAGCAAGAATTTCAAGCTAGTGGATCTTAGCTTGCTGGGCTCCGTGGGGGTGGGACCCACTGAGCCAGACCACTTGGCTCCCTGGCTTCAGCCCCCTTTCCAGGGGAGTGAACGGTTCTGTCTTGCTGGCGTTCCAGGTGCCACTGGGGTATGAAAAAAAAAACAAAAAAAAACTACAGCTAGCTCAGTGTCTGCCCAAATGGCTGCCCAGTTTTGTGCATGAAACCCAGGACCCTGGTAGTGTAGGCACCAGAGGAAATCTCCTGGTCTGCAGGTTGCGAAGACCATGGGGAAAGCACAGTATCTGGGCCGGAGTGCACCATTCACAGTCCCTCATGGCTTCCCTTGGCTAGGGCAGGGAATTCCCCTACCCCTTGTGCTTCCTGGGTGAGGCGATGCCCCACCCTGCTTCGGCTTGCCCTCCATGGGCTGCACCCAATGTCCAAGCAGTCCCAATGAGATTAACTGGGAACCTCAGTTGGAAATGCAGAAATCACCTGCCTTCTGCGTTGATGTAGCTGGGAGCTTCAGCCTGAGCTGTTTCTATTTGGCCATCTTTGAAGCTTTCCTGTAACAACCTATTTTTTCTTTTTTTTTGAAATGGAGTCTCACTCTGTTACCCAGGCTGGAGTGCAGTGGCGCAATCTTGGCTCACTGCCACCTCTACCTCCCGGGTTCAAGCGATACTCCTGTATCAGCCCCCTGAGTAGCTGTGATTACAGGCATGCGCCACCACGCCCGTCTAATTTTTGTACTTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGATCTTTTGATCCACCCGCCTCAGCCTCCCAACATGCTGGGATTACAGATGTAAGCCACCACGCCTGACCTCCTTCAGAACTTTAAATATGTCATGCCACTCTCTTCTGGCCTGTAAGGTTTCCAGTGAAAAGTCTGCTGCCAGACATATTGGAGCTCCATTTTATGTTGTTTCTTTTCTCTTGCTGCTTTTAGGATCCTTTTTTTATGCTTGATCTTTGGTAGTTTGATTATTAAATGCCTTGAGGCAGTCTTCTTTGGGTTAAATCTGCTTGGTATTCTATAACCTTCTTGTACTTGGACATTGATTTCTGTTATCCCTTTGAATAAGCTTTATACCCCATCTCTTTCTCTACCTCCTCTTTAAGGCCAATAACTCTTAGATTTGCCTTTTGTGGCTATTTTCTATATTTTGTACGTATGCTTCATTTTTAATAATTCTTTCTTTTGGTAGGGCATGGTGGCTCATGCCTGTAATCCCAGCACTATAGGAGGCCCAGGTGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTCGCCAACATGGCAAAACCCCATCCCTACTAAAAATACAAAAATTAGGCATGGTGGCACACACTTGTAGTCCTAGCTACTCAGAAGGCTGAAGCAGGAGAATCAC	20	PASS	ClusterIDs=HG4_PB_HySA_21578:HG3_PB_pbsv_14485:HG2_PB_assemblyticsfalcon_7957:HG4_PB_pbsv_14781:HG3_PB_assemblyticsfalcon_7980:HG4_PB_assemblyticsfalcon_7866:HG2_PB_PB10Xdip_9831:HG2_PB_PB10Xdip_9830:HG4_PB_SVrefine2PBcRDovetail_7371:HG4_Ill_SVrefine2DISCOVARDovetail_10431:HG3_Ill_SVrefine2DISCOVARDovetail_10576:HG2_Ill_SVrefine2DISCOVARplusDovetail_3795:HG2_10X_SVrefine210Xhap12_10251:HG2_PB_SVrefine2Falcon1plusDovetail_3463:HG2_PB_SVrefine2PB10Xhap12_10711:HG3_PB_SVrefine2PBcRDovetail_7012:HG3_PB_SVrefine2Falcon1Dovetail_8988:HG4_PB_SVrefine2Falcon1Dovetail_9020;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10251:HG2_Ill_SVrefine2DISCOVARplusDovetail_3795:HG3_Ill_SVrefine2DISCOVARDovetail_10576:HG4_Ill_SVrefine2DISCOVARDovetail_10431;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0487316;ClusterMaxSizeDiff=0.0487316;ClusterMaxEditDist=0.209589;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=7359;DistBack=7036;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=14:50227845-50227850;PctSeqSimilarity=0.9999;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:77:1/1:0:17:0:13:./.:0:4:0:2:1/1:0:41:1/1:1:1027:.:7558:.
chr14	51432079	HG2_PB_SVrefine2PBcRplusDovetail_3238	T	TCTGGAATTAAATCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_HySA_21582:HG4_PB_pbsv_14785:HG3_PB_pbsv_14489:HG2_PB_pbsv_14834:HG4_PB_assemblyticsfalcon_7874:HG3_PB_assemblyticsfalcon_7987:HG2_PB_assemblyticsfalcon_7965:HG2_Ill_breakscan11_4560:HG3_PB_HySA_22334:HG2_PB_PB10Xdip_9836:HG2_PB_PB10Xdip_9835:HG4_PB_SVrefine2PBcRDovetail_7374:HG4_Ill_MetaSV_1546:HG2_Ill_GATKHCSBGrefine_9845:HG4_Ill_GATKHCSBGrefine_10187:HG4_PB_SVrefine2Falcon1Dovetail_9024:HG3_PB_SVrefine2PBcRDovetail_7016:HG2_PB_SVrefine2PBcRplusDovetail_3238:HG3_PB_SVrefine2Falcon1Dovetail_8991:HG2_PB_SVrefine2PB10Xhap12_10715:HG2_PB_SVrefine2Falcon1plusDovetail_3467:HG3_Ill_MetaSV_1580:HG3_Ill_GATKHCSBGrefine_9740:HG2_Ill_MetaSV_1465:HG2_PB_HySA_26985;NumClusterSVs=25;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_3238:HG3_PB_SVrefine2PBcRDovetail_7016:HG4_PB_SVrefine2Falcon1Dovetail_9024;NumExactMatchSVs=3;ClusterMaxShiftDist=0.146565;ClusterMaxSizeDiff=0.146565;ClusterMaxEditDist=0.214706;PBcalls=18;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=8765;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=14:51432080-51432094;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1664.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:1:17:0:19:1/1:0:5:0:5:1/1:0:18:1/1:1:58:.:.:.
chr14	51718986	HG2_Ill_GATKHCSBGrefine_9853	T	TAAAGAAATCTTTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_26990:HG3_PB_pbsv_14493:HG4_PB_assemblyticsfalcon_7882:HG2_PB_pbsv_14839:HG4_PB_SVrefine2Falcon1Dovetail_9027:HG3_PB_assemblyticsfalcon_7994:HG2_PB_assemblyticsfalcon_7970:HG3_PB_SVrefine2Falcon1Dovetail_8994:HG3_Ill_MetaSV_1582:HG3_Ill_GATKHCSBGrefine_9744:HG2_Ill_MetaSV_1467:HG2_Ill_GATKHCSBGrefine_9853:HG3_PB_HySA_22337:HG2_PB_SVrefine2Falcon1plusDovetail_3470;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9853:HG2_Ill_MetaSV_1467:HG3_Ill_GATKHCSBGrefine_9744;NumExactMatchSVs=3;ClusterMaxShiftDist=0.18887;ClusterMaxSizeDiff=0.185497;ClusterMaxEditDist=0.259696;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=310;DistBack=12199;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=14:51718987-51719000;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1665.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:34:0|1:34:7:5:24:1|0:0:8:21:0:0/1:26:15:0/1:9:30:.:.:.
chr14	53304081	HG3_Ill_150bpfermikitraw_18611	A	AGGTACACCAACTAAATAACTTTGTAACCTCACTTCATCTTCTTCATTTACATAGGG	20	PASS	ClusterIDs=HG4_PB_HySA_21595:HG4_PB_pbsv_14792:HG2_PB_pbsv_14844:HG2_PB_PB10Xdip_9853:HG3_PB_pbsv_14499:HG2_PB_PB10Xdip_9852:HG2_PB_HySA_27004:HG4_Ill_svaba_18411:HG4_Ill_scalpel_13610:HG4_Ill_manta_3473:HG4_Ill_Krunchall_20377:HG4_Ill_GATKHC_23526:HG4_Ill_GATKHCSBGrefine_10194:HG4_Ill_250bpfermikitraw_19437:HG4_Ill_150bpfermikitraw_18717:HG3_PB_assemblyticsfalcon_8006:HG3_Ill_svaba_18554:HG3_Ill_scalpel_14205:HG3_Ill_Krunchall_19649:HG3_Ill_GATKHC_23443:HG3_Ill_GATKHCSBGrefine_9748:HG3_Ill_250bpfermikitraw_19137:HG3_Ill_150bpfermikitraw_18611:HG2_PB_assemblyticsfalcon_7983:HG2_Ill_svaba_18390:HG2_Ill_scalpel_13953:HG2_Ill_manta_4074:HG2_Ill_Krunchall_20060:HG2_Ill_GATKHC_23583:HG2_Ill_GATKHCSBGrefine_9856:HG2_Ill_250bpfermikitraw_19711:HG2_Ill_150bpfermikitraw_18586;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18586:HG2_Ill_250bpfermikitraw_19711:HG2_Ill_GATKHCSBGrefine_9856:HG2_Ill_GATKHC_23583:HG2_Ill_Krunchall_20060:HG2_Ill_manta_4074:HG2_Ill_scalpel_13953:HG2_Ill_svaba_18390:HG2_PB_assemblyticsfalcon_7983:HG3_Ill_150bpfermikitraw_18611:HG3_Ill_250bpfermikitraw_19137:HG3_Ill_GATKHCSBGrefine_9748:HG3_Ill_GATKHC_23443:HG3_Ill_Krunchall_19649:HG3_Ill_scalpel_14205:HG3_Ill_svaba_18554:HG3_PB_assemblyticsfalcon_8006:HG4_Ill_150bpfermikitraw_18717:HG4_Ill_250bpfermikitraw_19437:HG4_Ill_GATKHCSBGrefine_10194:HG4_Ill_GATKHC_23526:HG4_Ill_Krunchall_20377:HG4_Ill_manta_3473:HG4_Ill_scalpel_13610:HG4_Ill_svaba_18411;NumExactMatchSVs=25;ClusterMaxShiftDist=0.103448;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.252101;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=0;DistForward=30;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=92;REFWIDENED=14:53304060-53304151;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1666.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:2:24:0:14:./.:1:14:1:15:1/1:1:50:./.:.:.:.:.:.
chr14	53875170	HG3_PB_SVrefine2Falcon1Dovetail_9000	C	CCCCACTCTGCCTCCCTCCCCCACTCCTGCCTCCCTACCCACTCCTGCCTCCCCGACTCCTGCCTCCTCCTTACTCCTGCCTCCCTCCCCTACTCCTGCCTCCCTCCCCCACTCCTGCCTCCCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7022:HG3_PB_assemblyticsfalcon_8010:HG3_PB_SVrefine2Falcon1Dovetail_9000:HG2_PB_assemblyticsfalcon_7988:HG2_PB_SVrefine2Falcon1plusDovetail_3474:HG4_PB_HySA_21601:HG3_PB_HySA_22352:HG2_PB_pbsv_14845:HG4_PB_pbsv_14795:HG3_PB_pbsv_14500:HG4_PB_SVrefine2Falcon1Dovetail_9031;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9000;NumExactMatchSVs=1;ClusterMaxShiftDist=0.122137;ClusterMaxSizeDiff=0.122137;ClusterMaxEditDist=0.216216;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=123;DistBack=14;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=90;REFWIDENED=14:53875087-53875176;PctSeqSimilarity=0.9699;PctSizeSimilarity=0.9248;PctRecOverlap=0.5564;SizeDiff=-10;StartDistance=54;EndDistance=54;GTMatch=0;TruScore=81;MatchId=1667.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:36:0|1:37:8:3:27:./.:10:13:20:0:0/1:17:2:./.:.:.:.:.:.
chr14	54670461	HG2_PB_pbsv_14848	G	GGGAGTGGGGGGTCAGCCCCGCCCGGCCAGCCACCCCCGTCCGGGAGGTGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCCCCGTCTGGGGGGAGGTGGGGGGTCCAGCACCCCCTGCCCTGGCCAGCCGCCGCCAATCCGGGAGGTGAGGCGCCTCTGCACGGCCGCCCCCTACTGGGAAGTGAGGAGCACCTCTCCCGGCCAGCGCCGTCTGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10721:HG2_PB_pbsv_14848:HG3_PB_SVrefine2Falcon1Dovetail_9002:HG2_PB_SVrefine2Falcon1plusDovetail_3476;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_14848;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0269058;ClusterMaxSizeDiff=0.0269058;ClusterMaxEditDist=0.185941;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=219;DistBack=175;DistForward=88;DistMin=88;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=716;REFWIDENED=14:54670203-54670918;PctSeqSimilarity=0.9468;PctSizeSimilarity=0.9733;PctRecOverlap=0.9333;SizeDiff=-6;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=95;MatchId=1669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:40:./.:6:35:13:8:./.:4:0:1:0:0/0:12:0:./.:.:.:.:.:.
chr14	54815727	HG4_Ill_GATKHCSBGrefine_10202	T	TTGTCCCAAATATTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTGTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9004:HG2_PB_SVrefine2PB10Xhap12_10722:HG2_PB_PB10Xdip_9858:HG4_PB_HySA_21613:HG2_PB_pbsv_14851:HG4_Ill_SVrefine2DISCOVARDovetail_10451:HG4_PB_pbsv_14799:HG4_Ill_MetaSV_1551:HG4_Ill_GATKHCSBGrefine_10202:HG2_Ill_SVrefine2DISCOVARplusDovetail_3821:HG2_Ill_MetaSV_1471:HG2_Ill_GATKHCSBGrefine_9862:HG4_PB_SVrefine2Falcon1Dovetail_9033:HG2_PB_SVrefine2Falcon1plusDovetail_3478:HG2_PB_HySA_27028;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9862:HG2_Ill_MetaSV_1471:HG2_Ill_SVrefine2DISCOVARplusDovetail_3821:HG4_Ill_GATKHCSBGrefine_10202:HG4_Ill_MetaSV_1551:HG4_Ill_SVrefine2DISCOVARDovetail_10451;NumExactMatchSVs=6;ClusterMaxShiftDist=0.202212;ClusterMaxSizeDiff=0.202212;ClusterMaxEditDist=0.246445;PBcalls=9;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=2878;DistForward=18891;DistMin=2878;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=14:54815728-54815743;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1670.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:29:0|1:47:2:2:24:0|1:20:0:0:11:0/1:23:11:0/1:6:28:.:.:.
chr14	56302028	HG2_Ill_250bpfermikitraw_19736	A	ATATATATATATACACACATATATATGTGTGTGTGTGTATATACACACACAC	20	PASS	ClusterIDs=HG4_PB_HySA_21622:HG2_PB_PB10Xdip_9864:HG2_PB_PB10Xdip_9863:HG4_Ill_Krunchall_20401:HG4_Ill_250bpfermikitraw_19461:HG4_Ill_150bpfermikitraw_18744:HG2_Ill_Krunchall_20081:HG2_Ill_250bpfermikitraw_19736:HG2_PB_HySA_27035:HG4_PB_pbsv_14802;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19736:HG2_Ill_Krunchall_20081:HG4_Ill_150bpfermikitraw_18744:HG4_Ill_250bpfermikitraw_19461:HG4_Ill_Krunchall_20401;NumExactMatchSVs=5;ClusterMaxShiftDist=0.175439;ClusterMaxSizeDiff=0.175439;ClusterMaxEditDist=0.303571;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=30;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=12;REFWIDENED=14:56302027-56302041;PctSeqSimilarity=0.9655;PctSizeSimilarity=0.9273;PctRecOverlap=0.8909;SizeDiff=-4;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=92;MatchId=1671.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:38:0|1:26:3:5:33:./.:2:8:5:24:0/1:13:25:./.:.:.:.:.:.
chr14	56437911	HG3_PB_SVrefine2Falcon1Dovetail_9006	A	AAAGTCCAAATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTG	20	PASS	ClusterIDs=HG4_PB_HySA_21623:HG3_PB_pbsv_14507:HG4_PB_assemblyticsfalcon_7913:HG2_PB_pbsv_14854:HG4_PB_pbsv_14803:HG3_PB_assemblyticsfalcon_8028:HG2_PB_assemblyticsfalcon_8006:HG2_Ill_breakscan11_4561:HG2_PB_HySA_27036:HG3_PB_HySA_22370:HG4_Ill_MetaSV_1553:HG4_PB_SVrefine2Falcon1Dovetail_9034:HG4_PB_SVrefine2PBcRDovetail_7382:HG4_Ill_GATKHCSBGrefine_10205:HG3_PB_SVrefine2Falcon1Dovetail_9006:HG3_Ill_GATKHCSBGrefine_9751:HG2_Ill_MetaSV_1472:HG4_Ill_manta_3479:HG2_PB_SVrefine2Falcon1plusDovetail_3481:HG3_PB_SVrefine2PBcRDovetail_7027;NumClusterSVs=20;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_9751:HG3_PB_SVrefine2Falcon1Dovetail_9006:HG4_Ill_GATKHCSBGrefine_10205:HG4_PB_SVrefine2PBcRDovetail_7382;NumExactMatchSVs=4;ClusterMaxShiftDist=0.163043;ClusterMaxSizeDiff=0.15942;ClusterMaxEditDist=0.21164;PBcalls=14;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=286;DistBack=76345;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=14:56437912-56437925;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1672.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:27:0|1:30:2:1:28:0|1:32:0:0:5:0/1:29:14:./.:.:.:.:.:.
chr14	56666860	HG3_PB_SVrefine2PBcRDovetail_7028	A	AATATTTGTAGTTGTTATTGTAACAGAAGGTATTTCTTCTTTCTTTTACTGCTACTACACCACCTTGCCCTAACAATAATGAGAGTTCAAATACAGAGTGCTTATTCTGTGTCATACAGGTAATATCTATGGCCACCAGATTCTGTGCTAATAAGCACTTTGCATATTTTT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9865:HG3_PB_pbsv_14508:HG2_PB_pbsv_14855:HG2_10X_SVrefine210Xhap12_10266:HG2_PB_HySA_27038:HG4_PB_HySA_21626:HG4_PB_SVrefine2PBcRDovetail_7383:HG4_PB_SVrefine2Falcon1Dovetail_9035:HG4_Ill_SVrefine2DISCOVARDovetail_10458:HG4_Ill_250bpfermikitraw_19463:HG3_PB_SVrefine2PBcRDovetail_7028:HG3_PB_SVrefine2Falcon1Dovetail_9007:HG3_Ill_SVrefine2DISCOVARDovetail_10603:HG2_PB_SVrefine2PBcRplusDovetail_3244:HG2_PB_SVrefine2PB10Xhap12_10726:HG2_Ill_SVrefine2DISCOVARplusDovetail_3826:HG2_PB_SVrefine2Falcon1plusDovetail_3482:HG3_PB_HySA_22372:HG2_PB_PB10Xdip_9866;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3826:HG2_PB_SVrefine2PB10Xhap12_10726:HG2_PB_SVrefine2PBcRplusDovetail_3244:HG3_Ill_SVrefine2DISCOVARDovetail_10603:HG3_PB_SVrefine2Falcon1Dovetail_9007:HG3_PB_SVrefine2PBcRDovetail_7028:HG4_Ill_250bpfermikitraw_19463:HG4_Ill_SVrefine2DISCOVARDovetail_10458:HG4_PB_SVrefine2Falcon1Dovetail_9035:HG4_PB_SVrefine2PBcRDovetail_7383;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0691643;ClusterMaxSizeDiff=0.0685714;ClusterMaxEditDist=0.174648;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=170;DistBack=-168;DistForward=-1;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=170;REFWIDENED=14:56666861-56667030;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:./.:0:5:0:1:./.:1:14:2:18:1/1:2:41:./.:.:.:.:.:.
chr14	56942316	HG2_PB_pbsv_14856	A	AAATATATGTAATATATTACATATATATGTAAATATGTTATATAACATATAATATGTATATATATACACAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_14856:HG4_Ill_GATKHC_23561;NumClusterSVs=2;ExactMatchIDs=HG2_PB_pbsv_14856;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0408163;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.163265;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=-3;DistForward=14;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=14:56942315-56942317;PctSeqSimilarity=0.9072;PctSizeSimilarity=0.8875;PctRecOverlap=0.0864;SizeDiff=-9;StartDistance=-69;EndDistance=-69;GTMatch=1;TruScore=62;MatchId=1674.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:61:./.:6:15:1:31:./.:3:0:10:3:0/1:17:12:./.:.:.:.:.:.
chr14	59894353	HG3_PB_SVrefine2Falcon1Dovetail_9014	G	GGGTCTTCCACTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9040:HG4_PB_pbsv_14811:HG4_PB_HySA_21652:HG3_PB_HySA_22394:HG3_PB_pbsv_14520:HG2_PB_pbsv_14864:HG2_PB_HySA_27068:HG2_Ill_MetaSV_1476:HG3_PB_SVrefine2Falcon1Dovetail_9014:HG2_PB_SVrefine2Falcon1plusDovetail_3490;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9014;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0568862;ClusterMaxSizeDiff=0.0538922;ClusterMaxEditDist=0.185351;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=326;DistBack=9380;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=14:59894354-59894370;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1675.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:33:0|1:40:0:0:34:1|0:0:11:20:0:0/1:36:10:0/1:4:28:.:.:.
chr14	60454155	HG2_PB_PB10Xdip_9892	T	CAACCTTAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9892:HG3_PB_assemblyticsfalcon_8056:HG3_PB_pbsv_14526:HG2_PB_pbsv_14870:HG4_PB_pbsv_14815:HG2_PB_assemblyticsPBcR_7765:HG2_PB_HySA_27084:HG4_Ill_GATKHCSBGrefine_10218:HG3_PB_HySA_22398:HG2_PB_SVrefine2PB10Xhap12_10739:HG3_PB_SVrefine2Falcon1Dovetail_9017:HG2_PB_SVrefine2PBcRplusDovetail_3253:HG2_PB_SVrefine2Falcon1plusDovetail_3493:HG4_PB_SVrefine2Falcon1Dovetail_9044:HG2_10X_SVrefine210Xhap12_10275:HG4_PB_HySA_21662:HG2_PB_PB10Xdip_9893;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_9892:HG2_PB_PB10Xdip_9893;NumExactMatchSVs=2;ClusterMaxShiftDist=0.130501;ClusterMaxSizeDiff=0.130501;ClusterMaxEditDist=0.217968;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=330;DistBack=12285;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:60454156-60454154;PctSeqSimilarity=0.997;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1676.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:1/1:0:13:0:14:./.:1:8:2:6:./.:2:28:0/1:6:32:.:.:.
chr14	60532084	HG2_PB_SVrefine2PB10Xhap12_10740	C	CGCCAGGTGCAGTGGTTCACGCCTGTAATCCCAGAACTTTAGGCGGCCAAGGTGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACAAGGCAAAGCCCCATCCCTACTAAAAATACAAAAATTAACTGGGAATGGTGGCGTACACCTGTAATCTCAGCTACTCAGGAGGCTAAGGCAGGAGAATCGCTTGAACCAGGGAGGCAGAGGTTGCAGTGAGCTGAGATGGCACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCCTCTCAAAAAAAAAAAAAAAAAACTGTAAAAGAGAGTAAACTATTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10740:HG2_PB_HySA_27087:HG4_PB_pbsv_14816:HG2_Ill_breakscan11_4562:HG2_PB_pbsv_14871:HG2_PB_PB10Xdip_9895:HG3_PB_pbsv_14527:HG2_PB_PB10Xdip_9894:HG3_Ill_MetaSV_1594:HG3_PB_HySA_22399:HG2_10X_SVrefine210Xhap12_10276:HG2_PB_HySA_27086:HG2_PB_HySA_27085:HG4_PB_SVrefine2Falcon1Dovetail_9045:HG2_PB_SVrefine2Falcon1plusDovetail_3494:HG3_PB_SVrefine2Falcon1Dovetail_9018:HG2_PB_SVrefine2PBcRplusDovetail_3254;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10740:HG3_PB_SVrefine2Falcon1Dovetail_9018:HG2_PB_SVrefine2PBcRplusDovetail_3254;NumExactMatchSVs=3;ClusterMaxShiftDist=0.161137;ClusterMaxSizeDiff=0.135861;ClusterMaxEditDist=0.325434;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=322;DistBack=40324;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=322;REFWIDENED=14:60532085-60532406;PctSeqSimilarity=0.9578;PctSizeSimilarity=0.9908;PctRecOverlap=0.0615;SizeDiff=-3;StartDistance=-304;EndDistance=-304;GTMatch=0;TruScore=67;MatchId=1677.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:46:1/1:0:13:2:10:./.:0:3:0:3:1/1:0:10:0/1:2:12:.:.:.
chr14	60575486	HG4_Ill_GATKHCSBGrefine_10219	A	AATATTGATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_14872:HG3_PB_pbsv_14528:HG3_PB_HySA_22400:HG4_PB_pbsv_14817:HG4_PB_HySA_21663:HG2_PB_HySA_27088:HG3_PB_assemblyticsfalcon_8058:HG2_PB_assemblyticsPBcR_7767:HG2_Ill_breakscan11_4563:HG3_Ill_MetaSV_1595:HG3_PB_SVrefine2Falcon1Dovetail_9019:HG4_Ill_MetaSV_1555:HG4_Ill_GATKHCSBGrefine_10219:HG3_Ill_GATKHCSBGrefine_9765:HG2_PB_SVrefine2PBcRplusDovetail_3255:HG2_PB_SVrefine2PB10Xhap12_10741:HG2_PB_SVrefine2Falcon1plusDovetail_3495:HG2_Ill_MetaSV_1479:HG2_Ill_GATKHCSBGrefine_9878:HG2_10X_SVrefine210Xhap12_10277:HG4_PB_SVrefine2Falcon1Dovetail_9046:HG2_PB_PB10Xdip_9897:HG2_PB_PB10Xdip_9896;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10277:HG2_Ill_GATKHCSBGrefine_9878:HG2_Ill_MetaSV_1479:HG2_PB_SVrefine2Falcon1plusDovetail_3495:HG2_PB_SVrefine2PB10Xhap12_10741:HG2_PB_SVrefine2PBcRplusDovetail_3255:HG3_Ill_GATKHCSBGrefine_9765:HG4_Ill_GATKHCSBGrefine_10219:HG4_Ill_MetaSV_1555;NumExactMatchSVs=9;ClusterMaxShiftDist=0.128728;ClusterMaxSizeDiff=0.128728;ClusterMaxEditDist=0.165414;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=315;DistBack=43103;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=14:60575487-60575499;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1678.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:./.:0:1:0:1:./.:0:3:0:5:1/1:0:28:1/1:2:60:.:.:.
chr14	60741384	HG2_Ill_MetaSV_1480	T	TGAAATGGTTCACTCATGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAGAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9898:HG4_PB_pbsv_14818:HG4_PB_HySA_21664:HG3_PB_pbsv_14529:HG3_PB_HySA_22401:HG2_PB_pbsv_14873:HG3_PB_assemblyticsfalcon_8060:HG2_PB_assemblyticsPBcR_7768:HG4_Ill_MetaSV_1556:HG3_Ill_MetaSV_1596:HG3_Ill_GATKHCSBGrefine_9766:HG2_Ill_MetaSV_1480:HG3_PB_SVrefine2Falcon1Dovetail_9020:HG2_PB_SVrefine2PBcRplusDovetail_3256:HG2_PB_SVrefine2PB10Xhap12_10742:HG4_Ill_GATKHCSBGrefine_10220:HG2_PB_SVrefine2Falcon1plusDovetail_3496:HG4_PB_SVrefine2PBcRDovetail_7392:HG2_10X_SVrefine210Xhap12_10278:HG4_PB_SVrefine2Falcon1Dovetail_9047:HG2_PB_HySA_27090:HG2_Ill_breakscan11_4564:HG2_PB_PB10Xdip_9899;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_MetaSV_1480:HG3_Ill_GATKHCSBGrefine_9766:HG3_Ill_MetaSV_1596;NumExactMatchSVs=3;ClusterMaxShiftDist=0.181278;ClusterMaxSizeDiff=0.181278;ClusterMaxEditDist=0.26;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=327;DistBack=34627;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=14:60741385-60741400;PctSeqSimilarity=0.9954;PctSizeSimilarity=0.9909;PctRecOverlap=0.9879;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:4:20:0:22:./.:0:12:0:3:1/1:0:17:1/1:2:44:.:.:.
chr14	61639502	HG2_PB_SVrefine2Falcon1plusDovetail_3497	T	TAAAACCCAGGCAGCCTGGCAGCAAAGCTCACTCTTACATATAGGACCCCACTACTTTTCCAAGCAAGAACATCACTAGGTGATATGTTTTAGCTGTGTCCCCACCCAAATCTCATGTTAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9970:HG2_PB_pbsv_14877:HG4_PB_HySA_21675:HG4_PB_pbsv_14824:HG3_PB_pbsv_14533:HG3_PB_HySA_22404:HG2_PB_HySA_27097:HG4_PB_SVrefine2Falcon1Dovetail_9052:HG3_Ill_SVrefine2DISCOVARDovetail_10627:HG2_PB_SVrefine2PBcRplusDovetail_3258:HG2_PB_SVrefine2PB10Xhap12_10744:HG2_PB_SVrefine2Falcon1plusDovetail_3497:HG2_Ill_SVrefine2DISCOVARplusDovetail_3844:HG2_Ill_250bpfermikitraw_19770:HG2_10X_SVrefine210Xhap12_10279:HG4_PB_SVrefine2PBcRDovetail_7394:HG2_PB_PB10Xdip_9971;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10279:HG2_Ill_250bpfermikitraw_19770:HG2_Ill_SVrefine2DISCOVARplusDovetail_3844:HG2_PB_SVrefine2Falcon1plusDovetail_3497:HG2_PB_SVrefine2PB10Xhap12_10744:HG2_PB_SVrefine2PBcRplusDovetail_3258:HG3_Ill_SVrefine2DISCOVARDovetail_10627:HG4_PB_SVrefine2Falcon1Dovetail_9052;NumExactMatchSVs=8;ClusterMaxShiftDist=0.057377;ClusterMaxSizeDiff=0.0491803;ClusterMaxEditDist=0.234818;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=120;DistBack=3562;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=121;REFWIDENED=14:61639503-61639623;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1680.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:3:10:1:28:./.:2:12:1:11:1/1:1:27:./.:.:.:.:.:.
chr14	63221680	HG3_Ill_MetaSV_1598	T	TAAAGAGACAAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_21686:HG2_PB_HySA_27107:HG4_PB_pbsv_14830:HG2_PB_pbsv_14881:HG3_PB_assemblyticsfalcon_8075:HG3_PB_pbsv_14537:HG2_PB_assemblyticsPBcR_7783:HG3_PB_SVrefine2Falcon1Dovetail_9024:HG4_PB_SVrefine2Falcon1Dovetail_9056:HG2_PB_SVrefine2Falcon1plusDovetail_3499:HG2_PB_SVrefine2PBcRplusDovetail_3261:HG4_Ill_GATKHCSBGrefine_10227:HG3_Ill_MetaSV_1598:HG2_Ill_MetaSV_1482:HG2_Ill_GATKHCSBGrefine_9883;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9883:HG2_Ill_MetaSV_1482:HG3_Ill_MetaSV_1598:HG4_Ill_GATKHCSBGrefine_10227;NumExactMatchSVs=4;ClusterMaxShiftDist=0.177019;ClusterMaxSizeDiff=0.177019;ClusterMaxEditDist=0.195652;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=14:63221681-63221692;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:0|1:24:2:2:23:0|1:16:0:0:10:0/1:24:7:0/1:11:37:.:.:.
chr14	63226283	HG2_PB_SVrefine2Falcon1plusDovetail_3500	T	TAGGGTATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGCCTGGAGGGCAGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTAGCCAGGATGGTCTTGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4565:HG3_PB_pbsv_14538:HG2_PB_HySA_27109:HG2_PB_PB10Xdip_9976:HG2_PB_pbsv_14882:HG3_PB_assemblyticsfalcon_8076:HG4_PB_pbsv_14831:HG4_PB_HySA_21687:HG4_Ill_GATKHCSBGrefine_10228:HG2_PB_HySA_27108:HG4_PB_SVrefine2PBcRDovetail_7396:HG4_Ill_SVrefine2DISCOVARDovetail_10480:HG2_PB_SVrefine2PB10Xhap12_10747:HG2_PB_SVrefine2Falcon1plusDovetail_3500:HG4_PB_SVrefine2Falcon1Dovetail_9057:HG3_PB_SVrefine2Falcon1Dovetail_9025:HG3_Ill_SVrefine2DISCOVARDovetail_10633:HG4_Ill_MetaSV_1558;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3500;NumExactMatchSVs=1;ClusterMaxShiftDist=0.31016;ClusterMaxSizeDiff=0.31016;ClusterMaxEditDist=0.385027;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=338;DistBack=4589;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=14:63226284-63226292;PctSeqSimilarity=0.9971;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1682.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:24:0|1:21:0:3:28:0|1:20:0:0:7:0/1:28:12:0/1:8:27:.:.:.
chr14	64268839	HG2_PB_SVrefine2PB10Xhap12_10752	A	ATTTGAGATGAAGTCTTGCTCTGTCACCCAGGCTGGAATGCAGTGGCATAATCTTGGCTTACTGCAACCTCCGCCTCTCGTGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCACGCCACCACACCTGGCTAATTTGTGAATTCTTAGTAGAGGTGGGGCTTCACCATGTTGGCCAGGATGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTCTGGCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCACTCAGCTGATAATTCTATTTTAAATTTAGGTTAACCTTAATTTATTCTTCTTAAGAAGTTTTTTTAAAATAATATATGAAAGACAAAAGCAATAAAAGACTGAAAAAAATTTAATTCATCTAAATATAAAGCATTTAAAAAAAAAAAAAGGCTATTTGGCCAGGTGTGGTGGCTTACCCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGTGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGTGTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGTCAAGATCATGCCACTGAACTCCAGCCTGGTGACACAGCAAGACTCCATCAAAAAAAAAAAAAAAAAAAAAGCTATTCATGCTTTTACCAACAAACAAGGGAAAGATAATAGTCACAGTTCTGATCTTTGCTAACTTGCACCATGTAGATTACCAAACTGTTTTGAGGAGAAATTAGATGAATCAAAAATCCCCAAATGCTTGGAAATTGAGCAAAATACATTCAAAAAACAGGTAGATTAAAGAAGAAAACATAATGGACATTTTAAACTATTTTGAATGAAACGTGACAAAAATATAACATAACAAAATTTGTGAAATACAGCTAAAATAGTGCTCAGAGGGAAAATATAGCTTTCAATATAATATTAAAAATCAAAGGTTAGTCTGGGCAACATATGGGCCCTGTCTTTACAAAAAATAATAATAATAATTAGCCACGGTGGCATGCACCTGTAGTTCCAGCTACTCAGGTAACTGAGGTGGGAGGGTGGCTTGAGCCCAGGAGCTCAAGGCTGCAGTAAGCAGAGATCATGCCACTGCCCTCCAGCCTGGATGACCGGGTGAGACCTTGTCTCAAAAGAAAAAAAAAAAGAAAGAAAAGACAAAGAAAGAAAAAAAAAGATTGTCAGTTATCTGAGCCTCCATATCAATAGTGTATTTTTTTTTAAAGAAACTGAAGCCAAAATTAATGTAACTAGAAAGTTTATTTTGGCTAAGGTTGAGGACTACGGCCAGGGAATCCGAGATTAATGTTACCCTGAATATATGCTTTAATTAGCAGCAGTTACAAGTGGGTTTATACAGGAAAAAAGAGAAGTTAGAGTGCAGTCCCTAAAGTGTTTACCAAGAATTAACATTGGTTCTCTAAAATAAGTAAGCTATTGATTGGCTTATGATACATTGTTCTTGTATCACAAAACCCAGGAACATGAAGATAATAAGTTGGGGTTACATTGTGCTATTTGTGGTAACATTTTAGGAAAACAAAACAATTACCTCCAGGCATGGCTGCAGGGGATATGATTGAAGCCTGGTGTTCATGTCTCTGTGGGCCTGATAAATTTTGAATATTTCACATTCCTTAGACTGTGCTGAGCCACTTTTCTTTCTCAAAAGCAAAAATTATAAATAACTGAAATAAAAAGTGGACATTGATATTGTCAACTTTAAATAACAAGATTCAGAAAATATGATTAAATACAGAGTTTGAGAATAGACATCCAGGAAGCACAGATTCCAAATAATGGAAGACAGTATTCCAAAGTGTAGAAGTTTGGGATTATTTATATAGACAAGGTTTAGGGAAGCTTAATAGAATTTCAACATCTTTTATGTAAGGGTTAATGCATAGTTACAATAATTTGATCGAAGTGGGCTTTTTCTTTCAAGAAAGGTATGTTTAACATTCCACACAGAAGATGAAACAGTCATGGGGTCTTTTGTGCCATCTGTTCTGAATTAGGTACAGGACAATAAAGGAGGCGGTTAACCTATGACGAAGGTCATTGATTTGAAGGGGAAGTTGTCTGGTCTCTGGTCTTTCCTAGTCATTTACAGAACAAGAAGCATGAGAAAGAGACTCAATCTATAATATAATATTATTTTATTTTATTATTTTATTTTATTTTATTGAGACAGAGTCTCACTCTGTTGCCCAGACTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCTACCTCCCAGGTTCAAGCGATTCTGCTGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGTGCCCATGATCATGCCCTACTAATTTTTGTATTTTTATTAGAGACAGGGTTTCATCATGTTGGCCAGGCTAGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTTGGCCTCCCAAAATGCTGGGATTACAGGAGTGAGCACCACACCTGGCCTAATCTATAAGAAGCAGAAGTTACAACTCCATGCTACATGACTCGGATCGGCCATGTCTCTCTCAAGTCTTGAAGTGTTTTTGGAGTTCCAGCAGCTTCTAAATTTTATTTTCACACTATATATCCTACATGCCTTTAAAAAATAAAATATTATGAATAACTGCATCCCAATAAAATGTGACAATTAGATCAGAAGGACAAATTACTTGATTTTAAAAATTACTAAGACTGATGAAAGAAGAAATTTAAAAGCTGAATAGTTCTAAATACATAAGAAAAACAGGATTTAACATTTGACACCTTTCCACCATGTGTATGGCATAGACAGAGAAAAGAAATATGAGCAAAGGCATTGTTGAGAGAGCTGTTTAGGCAAAGCGGACAGTCAATGTACGAGAGGTCTGAAAACAGGACCTGAAATTTAGGTACTTTGAACTGTGGGGTTACCGTTAATAGTGAGAATAAAGCAGAGTAACCCAAGTCCTGAAAGAACAGGGCAAAGCCAGACTAGCAGCTAAAGTGTCACTTGAGCTACTGAATTATATTGCCTTCAGTTCTTCACATTAAAGGACAAGATTGGTCTCTGGTCCTGATCTGGGGCTAGGTTTTTCAATGGGAGTGAATTAACTCTAGCTGTGTGATGAATGTTAAAAGAAAAACTTAAGAAAATTAAATTTAACAGAGTTTGACTGAGCAAAGAATGATTTGAGTATTGGTCAGGTCTCTGAACCAGGATAGGTTCAGGGCAACTTCAGGGCTGCCACATGGCCAGATAATATTTATGGACAGAAAAAGGAAAATGAGGTACAGAGAAACATGAGGTATAGAAACAGCTAGATTGGTTACAGCTTGGTGTTTGCCTTATTTGAACATGGTTTGAACAGTTAGCTGTCTGTGACTAGCCAAAACTCTGTGATTGGCACAAGAGTAGGTTAGTCTGTTTACACTTCCAGTTCAGTTACAGTTCACTGTGTACAGAGAAAACTTTAAGCTGAGCTTAAAATATGTAAGAAGGCACTTTTAGGCTAAACTTAATTTAACATGAAGTTAGAATAAAGTGAAAATAATGCATACTTATTTTATTGTACATTGAGGGAGTTTCAAGGTGATGGGGTTCAGGACATGCTACCCCAAAATATGTCACCTTGGCATACTGAAAAATGGCAGAAGCCTTTGGCATAAGGATTATTTTGAGCTCATTATTTTGAGAGACTGCAGCTACAGGAGAAGCTTAGAAAACAAGAGCAGAAGTCATACTTTTCTTTCTTATGTATTTATTTATTTCTCCATGAAGACCTAGAAGTCACACTTTTCTTTCTTTTTAATGTATTTCTCCATGAAGGCCCAGAAGTCACACTAAGAGAAATTTACATCTATAGAGGAAATTTCCATTCACAAGCATGTCTCCATTTGTAACCATGTCTCTCCTCCCACTTTATACCAGAAAGAGAAAGATGACTCTAAGTCACTACAGACTCTTATCAATGGAGAAGGCACCAATGTAAATCTGCATAACAAACATGACCCTGATTTACCATGCTTTTCCTGATCACCTCCTCATAATCAGGCTTTCCCACACCCTCTTTCTTTGTTTCCATTGAAGATTTTTTTTTTTTTTTGCTTCCAAATTTTATTTTAGGTTCAAGGGATACATGTGCAGGTTTGTTACATGGGTAAATTGCATGTCACAGGGGTTTGGTTTATTAATTATTTCATTACCCAGGTAATAATCATAGTTCCTGATAGATAGCTTCTCCATCCTCACCTTCCTCCCACCTTTCACCTTCAAGTAGGCCCCCTTGTCTGTTGTTCCCTTCTTTGTGTCCATGTGTACTCAGTGTTTAGCTCCCACTTATAAGTGAGAACTTGCAGTGTTTGGTTTTCTGTTCCTGTATTAATTTGTTTAGAATAATGGCCTCCAGCTCTGTCCATGTTGCTGCAAAGAACATTATTTCATTCTTTTTTATGGCTGTGTAGTATTCCATGGTGTATATCTGCCATGTTTTCTTTATCCAGTGACCATCAATAGGCATTTAGATTGAGTTCATGTCTTTGCTATTTTGATAGTGTTGTGATGAACATACGCGTGCATGTGTCTTTATGATAGAATAATTTATATTCCTTTGGGTATTTACGCAGTAATAGGATTGCTGGGTCAAATGATAGTTCTGAGGTTTTTTTCTTTCTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGTTGGAGTGCAGTGGCGCGATCTTGGCTTACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACTGGCGCCCACCACCATGCCCGGCTAATTTTTTGTATTTTTAGTGGAGATGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTTCTGACCTTGTGATCTGCCTGCCTCGGCCTGCCAAAGTGCTGGGATTACAGTCATGAGCCACTGCACCCAGCCTCATTTTTGTTATTGTTTTGTTTTTTGTTTTTTTCTGAGACAGGGTCTTGCTCTGTGGCCCAGGCTAGAGTACAGTGGCACGCTCATAGCTCACTGCAGGCTCAACCTTCCAGGCTCAAGGGATCCTCTACCTGAGCTTCCCCAACAGCTGGGACCACAGACGCATGCCACATGCCTGGCTAATTTTTTATTTTCTGTAGAGATGGAGTCTTAGTATGTTACCCAGGCTTCTCTCCAACTCCTGGCCTCAAATGATTCTCCCACCTCAGCCTCCCAAAGTGATGGGATTACAGGTGTGAGCCACTGCATCCAGCTGGTAGTTCTGCTTTAAGTTCTTTGAGAAATCTCCAAACTACTTTCCACAGTGGTTAAGCTAACTTACATTCCCACTAGCAGTGAATCAGTGTTCCCTTTTCTCTGCAATCTCATCAGCATCTGTTATTTTTTGACTTTTTAATAATAGCCATTCTGACTGGTAGTATCTCTTTGTGGTTTTGACTTGCATTTCTCATTTTTGTTTTTGTTTTTTAGAGTTGGGGTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTGGGTTCAAGTGATCCTCCCACCTCAGCCTACCGAAGTGCTGGATTACAGGTGTGAGCCACTATGCCCAGCCGATTTGCATTTATCTAATGATTAGTGATGATGAGCATTTTTTCACATGCTTGTTGGCCATGTGTATGTCTTCTTTTGAGAAGTGTCTGGTCATGTTCTTTGCCCATTAATATGGTTTGGCTCTGTGTTCCCACCAAAATCTCATGTTGAATTGTAATCCCCTGTGTTGGAGGAAGTACCTGATGGGAGGTGATTGGATTGCACGGGCAGATCTCCCCCTTGCTGTTCTCATGATGGTGAGTGAGTTCTCACGAGATCTGGTTGTTTGAGAGTATGTAGCACTTCCCCCTTCACTCTTTCTCTCCTGCTCCACCATGGTAAGATGTGCTTGCTTCCCCGTTGCCTTCCACCATGATTAATAAATTTCCTGAGGCCTCCCAGCCATGCTTCCATGTCATGTTGGGCCTGTGGGTGCACAGAAGGCAAGGGTTGAGATTTGGGACCCTTCGCCTAGATTTCAGAGAAGGTATGGAAATGCCTGGATGTCCAGACAGGAGTCTGCTGGAGGGGCAGAGCCCTCATGGAGAACCTCTACTAGGGCAGTGTGGATGGGAAAGGTGGGGTTGTAGCTCCCACAGTGTCCCCACTGGGGCATTGCCTAGTGGAGTTGTGTGAAGAGAACCACCATCCTCTAGACCTCAAAATGGTAGATTCACTGACAGCTTCCACTGTGCACCTAGAAAAGCCACAGGCACTCAATGTTAACCTATGAAAGCAGCTGCAGGGGCTTTACCCTGCAGAGCCACAGGGGAGGAGCTGCCCAAGGCTTTGTGAGCCCACTCTTTGCATCAGCATGCCCTTGGAAGTGAGTCTTTCCCTGTTTGGAGTCATAGGAGATTATTTTGGAGCTTTAAAATTTAATGACTGCCCTGCTGAGCTTCAGACTTGCATGGGGCCTGTCATGCCTTTGTTTTGGTCAATCTCTCTCTTTTGGAACAGAGGCATTTACCCAATGCCTGTACCCCCACTGTATCTAAGTAGTAACAAACTTGTTTTGTTTTGTTTTGGTTTGGTTTTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10294:HG3_PB_HySA_22416:HG4_PB_pbsv_14837:HG2_PB_PB10Xdip_9982:HG2_PB_assemblyticsPBcR_7789:HG2_PB_assemblyticsfalcon_8067:HG3_Ill_SVrefine2DISCOVARDovetail_10638:HG4_PB_SVrefine2Falcon1Dovetail_9061:HG2_PB_SVrefine2PBcRplusDovetail_3264:HG2_PB_SVrefine2PB10Xhap12_10752:HG2_Ill_SVrefine2DISCOVARplusDovetail_3860:HG3_PB_SVrefine2Falcon1Dovetail_9026:HG4_PB_SVrefine2PBcRDovetail_7400:HG2_PB_SVrefine2Falcon1plusDovetail_3504;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3860:HG2_PB_SVrefine2PB10Xhap12_10752:HG2_PB_SVrefine2PBcRplusDovetail_3264;NumExactMatchSVs=3;ClusterMaxShiftDist=0.110542;ClusterMaxSizeDiff=0.110542;ClusterMaxEditDist=0.194428;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=6704;DistBack=19653;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=275;REFWIDENED=14:64268840-64269114;PctSeqSimilarity=0.9992;PctSizeSimilarity=1;PctRecOverlap=0.9894;SizeDiff=0;StartDistance=-71;EndDistance=-71;GTMatch=0;TruScore=99;MatchId=1683.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:13:0:8:./.:0:6:0:5:1/1:0:42:1/1:0:857:.:6774:.
chr14	65015035	HG4_Ill_GATKHCSBGrefine_10234	T	TGAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_27129:HG2_PB_pbsv_14891:HG4_PB_HySA_21698:HG3_PB_pbsv_14545:HG2_PB_assemblyticsfalcon_8073:HG3_PB_HySA_22426:HG2_PB_SVrefine2Falcon1plusDovetail_3506:HG4_PB_SVrefine2PBcRDovetail_7404:HG4_PB_SVrefine2Falcon1Dovetail_9064:HG4_Ill_GATKHCSBGrefine_10234:HG3_PB_SVrefine2Falcon1Dovetail_9028:HG4_Ill_MetaSV_1560:HG2_PB_SVrefine2PB10Xhap12_10757:HG4_PB_pbsv_14841:HG2_Ill_breakscan11_4566;NumClusterSVs=15;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9028:HG4_Ill_GATKHCSBGrefine_10234:HG4_PB_SVrefine2Falcon1Dovetail_9064:HG4_PB_SVrefine2PBcRDovetail_7404;NumExactMatchSVs=4;ClusterMaxShiftDist=0.117465;ClusterMaxSizeDiff=0.114374;ClusterMaxEditDist=0.228148;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=324;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=14:65015036-65015043;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:27:0|1:25:0:0:28:0|1:29:0:0:11:0/1:32:11:0/1:11:29:.:.:.
chr14	65289121	HG2_PB_SVrefine2PBcRplusDovetail_3269	G	CACACACACACACACACACAGCAAGAGAGAGAGAGGGTGGGGGTGGAGAATATCTTAAATCTCTAGTAGAAATGGCTTCTCCTCCCTCTGCTGGCTGAGGTCTGGTTCTTGGGATACACACACACACACACACACACACACACACACACACACACACACAC	20	PASS	ClusterIDs=HG3_Ill_Spiral_15403:HG4_PB_SVrefine2Falcon1Dovetail_9065:HG3_Ill_GATKHCSBGrefine_9782:HG2_PB_SVrefine2Falcon1plusDovetail_3507:HG3_Ill_SVrefine2DISCOVARDovetail_10643:HG2_Ill_SVrefine2DISCOVARplusDovetail_3865:HG2_PB_assemblyticsPBcR_7799:HG2_PB_SVrefine2PBcRplusDovetail_3269:HG2_PB_SVrefine2PB10Xhap12_10758:HG3_PB_SVrefine2Falcon1Dovetail_9029:HG4_PB_SVrefine2PBcRDovetail_7405:HG4_Ill_SVrefine2DISCOVARDovetail_10490:HG2_10X_SVrefine210Xhap12_10298:HG2_PB_PB10Xdip_9988:HG2_PB_PB10Xdip_9987:HG4_PB_pbsv_14843:HG2_PB_HySA_27132:HG3_PB_pbsv_14546:HG2_Ill_MetaSV_1484:HG2_PB_pbsv_14893:HG4_PB_HySA_21700:HG3_PB_HySA_22427:HG3_Ill_MetaSV_1602;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10758:HG2_PB_SVrefine2PBcRplusDovetail_3269:HG2_PB_assemblyticsPBcR_7799;NumExactMatchSVs=3;ClusterMaxShiftDist=0.210863;ClusterMaxSizeDiff=0.210863;ClusterMaxEditDist=0.280822;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=160;DistBack=0;DistForward=3;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=14:65289093-65289120;PctSeqSimilarity=0.9786;PctSizeSimilarity=0.9563;PctRecOverlap=0.795;SizeDiff=7;StartDistance=29;EndDistance=29;GTMatch=0;TruScore=90;MatchId=1686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:0:24:0:29:./.:4:58:1:53:./.:1:11:./.:.:.:.:.:.
chr14	66258295	HG2_PB_PB10Xdip_9994	G	GTGTGTGGTCTGTGCGGTATGCATGTAGGTGCGGTGTAAGCTGTGGGATTGTGGTGTGTGTGTGGTGGGTGATGTGTGCATTTTATGCATAGGCTGTGTGTGTGTGGTGTGTGTGTGTGAGGTGTGTAGTCTGTGGGATTATAGTGTGTGTGGAGTGGGGAGGTGTGTGTGATCTGTGTGAGGTGTGTGTGGTGTGTGTGTGTGAGGTGTGTGGTCTGTGGGATTATAGTGTGTGTGTGTGTGTGTGTGAGGTGTGTGTGGTCTGTGTGAGGTATGTGTGGTCTGTGTGTGTGGTCTGTGTGAGGTGTGAGGTATCTGTGGTCTGTGTGTGTGTGAGGTGTGTGTGGTCTGTGGGTCTATAGTGTGTGTGTGACGTGTGAGGTGTGTGTGGTCTGTGTGAGGTGTGAGGTGTGTGTGGTCTGTGTGTGTGTGAGGTGTGTGTGGTCTGTGGGTCTATAGTGTGTATGAGGTGTGCGTGGTCTGTGTGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGGTATGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGTGAAGTGTGTGTGGTCTGTGTGTGTGTGAGGTGTGTGTGTTCTGTGGGTATGTAGTGTGTGTGAGGTGTGTGTGGTCTGTGTGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGTGAGTTGTGTGTGGTCTGTGTGTGTGTGAGGTGTGTGTGGTCTGTCGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATAAGGTGTGTATGAGGTGTGTGTGGTCTGTGTGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGTGGTGTGTGTGAGGTGTGTGTGGTCTGTGTGTGTATGAGCTGTGTGTGGTCTGTGGGTATGTAGTGTGTGTGAGGCGTGTGTGGTCTGTGTGTGTGAGATGTGTGTGGTCTGTCGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGTGAGGCATGTGTGGTCTGTGTGTGTGAGGTGTGTATGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTATGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGTGAGGCGTGTGTGGTCTGTGTGTGTGAGGTGTGTATGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGTGAGGCGTGTGTGGTCTGTGTATGTGAGGTGTGTGTGGTCTGTGTGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGGTCTGTGGGTATGTAGTGTGTGTGAGGCGTGTGTGGTCTGTGTATGTGAGGTGTGTGTGGTCTGTGTGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGTGTGTGAGGCGTGTGTGGTCTGTGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTTTGTAGTTTGTGTGAGGCGTGTGTGGTCTGTGTATGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATGTAGTGCGTGTGAGGCATGTGTGGTCTATTTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAGTGTGTGAGGTGTGTGTGGTCTGTGGGTATATAATGTGTGAGGTGTGTGGCCTGTGGGTATATAGTGTGTGAGGT	10	PASS	ClusterIDs=HG2_PB_pbsv_14898:HG3_PB_assemblyticsfalcon_8100:HG3_PB_pbsv_14550:HG2_PB_PB10Xdip_9995:HG2_PB_assemblyticsPBcR_7808:HG2_PB_PB10Xdip_9994:HG2_PB_HySA_27143:HG4_PB_SVrefine2Falcon1Dovetail_9067:HG2_PB_SVrefine2Falcon2Bionano_7379:HG3_PB_SVrefine2Falcon1Dovetail_9031:HG2_PB_SVrefine2PBcRplusDovetail_3273:HG2_PB_SVrefine2PB10Xhap12_10763:HG2_PB_SVrefine2Falcon1plusDovetail_3511:HG3_PB_HySA_22432:HG2_PB_HySA_27142;NumClusterSVs=15;ExactMatchIDs=HG2_PB_PB10Xdip_9994:HG2_PB_PB10Xdip_9995;NumExactMatchSVs=2;ClusterMaxShiftDist=0.134391;ClusterMaxSizeDiff=0.134391;ClusterMaxEditDist=0.258983;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2180;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=14:66258296-66258295;PctSeqSimilarity=0.9921;PctSizeSimilarity=0.9853;PctRecOverlap=0.9853;SizeDiff=32;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1687.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:92:1/1:1:28:0:22:./.:1:12:4:23:1/1:1:21:1/1:4:341:.:2274:.
chr14	66934446	HG2_Ill_MetaSV_1489	C	CAAGAATCTGAAAGTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3513:HG2_PB_pbsv_14901:HG3_PB_assemblyticsfalcon_8103:HG3_PB_pbsv_14553:HG2_Ill_breakscan11_4567:HG2_PB_HySA_27147:HG2_PB_SVrefine2Falcon2Bionano_7383:HG3_PB_SVrefine2Falcon1Dovetail_9034:HG2_Ill_MetaSV_1489:HG2_Ill_GATKHCSBGrefine_9896;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9896:HG2_Ill_MetaSV_1489:HG3_PB_SVrefine2Falcon1Dovetail_9034;NumExactMatchSVs=3;ClusterMaxShiftDist=0.194719;ClusterMaxSizeDiff=0.191419;ClusterMaxEditDist=0.247525;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=321;DistBack=-25;DistForward=-1;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=14:66934447-66934461;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1688.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:34:./.:36:0:13:34:./.:18:0:1:15:0/1:21:14:0/1:11:28:.:.:.
chr14	67083008	HG2_PB_SVrefine2PB10Xhap12_10767	G	GCAGTACGGCCATTTTCACGATATTGATTCTTACTATCCATGAGGATGGAATGTTTTTCCATTTGCTTGTGTCCTCTCTTATTTCCTTGAGCAGTGGTTTGTAGTTCTGCTTGAAGAGGTCCTTCACATCCTTGTTACCTGTATTCCTAGGTATTTTATTCTTTTTGTAGCACCTGTTGAATGGGAGTCATGATTTGGCTCTCTGCTTGTATATTGTTGGTGTAGAGGAATACTTGTGATTTTTGCACATTGATTTTGCATCCTGAGACTTTGCTGAAGTTCCTTATCAGTTTATGGAGTTTTTGCGCTGAGATGATGGAGTTTTCTAAATATAAAATAATGCCATGTTCAAACAGAGACAGTTTGACTTCCTCTTTTCTTTTTTGAATACCTTTTATTTCTTTCTCTTGTCCGATTGTCCTGGCCAGAACTTCCAATACTATGTTTTATAGGATTGGTGAGAGAGGGCATCCTTGTCTTGTACTGGTTTTCTGCTTCCAGCTTTTGCCCATTTAGTATGATATTGGCTGTGGGTTTGTCATAAATAGCTCTTATTATTTTGAGATATGTTCAATCAATACCTAGTTTATTGAGTGTTTTTAACATGAAGGGATACTGAATTTTATCCAAGGGCTTTTCTGGTTCTATTCAGATAATCACGTGGTTTCTGTCTTTGGTTCTGTTTATGTGATGGATTATGTTTATTGATTTGCATATTTTGAACCAGCCTTGCATCCCAGGGATGAAGCCTACATGATTGTGTTGGATAAGTTTTTTGATGTGCTGGATTTGGTTTGGCAGCATTTTATTGAGGATTTTCACATCAGTGTTCATCAGGGATATTGGCCTGAAGTTTTTTTGTTGTTGTTGTGTTTCTTCCTGGTTTTGGTATCAGGATGATGCTGGCTTCATAAAATGAGTTAGGGAGGAGTCCCTCCTTTTCAGTTGTTTGGAATAGTTTCAGAAGGAATGGTACCGGCTCCTCTTTATACTTCAAAGAGGTCTGCTCTTAATTTGCTCTTGCCTCTCTAGCTCTTTAAATTGTGATTTTAGGGTGTCAATTTGAGATCTTTCTAGCTTTCTGATGTGGGCATTTAGTGCTGCTTTAGCTGTGTCCCAGAGATTCTGGTATGTTGTCTCTTTGTTCTCACTGGAGTCAAAGAACTTGATCTCTGCCTTAATTTCATTATTTACCCAGGAGTCATTCAGGAGCAGATTGTTCAATTTCCATGTAATTGTATGGTTTTCAGTGAGTTTCTCTAATCCCGTGTTCTAATTTGATTGCACTGTGGTCTGAGAGACTGTTTGTTATGATTTTTGTTCTTTTGCATTTGGTAAGGAGTGTTTTACTTCCAGTTATGCGGTCGATTTTAGAATAAGTGCCATGTGGCACCGAGATGAATGTACATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGGTGTCTATTAAGTTAGGTCCACTTGATCCAGAGCTGAGTTCAAGTCCTGAATATGGTTATTAATTTTCTCTCTCGTTGATCTGTCCAGTATTTACAGTGAGGTGGTAAAGTCTCTCACTATTATTGTGTGGGAGTCTAAGACTCTTTGTAGGTCTCTAAGAACTTGTGTTATGAATTTGGGTGTCCTGTACTGGGTGCATATATACTTCAAATAGTGAGCTTTTCTTTTTGAATTGTTCCGTTTACCATTATGTAATGACCTTCTTTTGTCTTTTCTGATCTTTGTTGGTTTAAATTCTGTTTTGTCAGAGACTAGGATTGCAACCCCTGCTTTATTTTGCTTTCCATTTGCTTGGTAAATTTTCCTCCATCCCTTTATTTTGAGCCTATGTGTGTCTTTGCACATGAGATCAGTCTCCTGAATACAGCACTCTGAAGGAAGTTCACTCTTTCCAGTTTGCCAGTCTGTGTCTTAATTCGGGCATTTGGCCCATTTGCATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATCATGACGCTATCTGGTTATTTTGCACACTAGTTGATGCAGTTTCTTCATAGTGTCATTGGTCTTTATATTTTGGTGTATTTTTGCGATAGCTGGTACTGGTTTTTCCTTTCCATATTTAGTGCTTCTTTCAGGAGCTCTTGCAAGGCAGGCCTGGTGGTAACAAAATCCCTTAGCATTTGCTTGTCTGGAAAGGATTTTATTTCTCCTTCGCTTATGAAGCTTAGTTTGACTGGATATGCAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCTAGTCTCTTCTGGCTTCTGATTGGCTTCCTTTGTAGGTGACCTGGCCTTTCTTTCTGGCTCCTCTTAACATTTTTTCCTTTATTTTGACCTTGGAGAATCTGATGATTAAGTGTCTTTGTGTTGATCTTCTTGTGGAGTATCTTAGTAGTGTTTTCCGTATTTCCTGAATTTCAGTGTTGGCCTGTTTTGCTATGTTGGGGAAGTTCTGCTGGATAATATCATGAAGTGTGTTTTGTAGCTTGTTTCTGTTCTCCCCATCTCCTTCAGGTACTCCAGTCAATTGTAGATTCGGTCTTTTCATGAAGTCCCATATTTCTTGGAGGCTTTGTTCATTCCTTTTCATTCTTTTTTCTCTAGTCTTGTCTGCATGCCTTATTTTTGCAAGATGGTCTTCAAACTCTGATATCCTTTCTTCTGCTTTGTTGATTTGGCTATTGATACTTGTGTATGCTTCACGAAGTTCTCAAGCAGTGTTTTTTCTCTCCACCAGGTCATTTATGTTCCTCTTTAAAGTGGTTATTCTAGTTAGGAGCTCCTTTAACCTTTTATCAAGGTTCTTAGCTCTTTGCATTGAGTTAAAACATGCTCCTTTAGCTCAGCATAGTTTCCATTTTCTGAAGCCTACTTCTATCACTTTGTCTGTCTCATCCTCTGTCTAGTTCTGCGCCCTTGCTGGAGAGACGTTGCGATTATTTGGAGGAGAAGTGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4568:HG3_PB_pbsv_14555:HG2_PB_pbsv_14903:HG2_PB_assemblyticsPBcR_7812:HG2_PB_HySA_27148:HG2_PB_SVrefine2Falcon1plusDovetail_3515:HG3_Ill_SVrefine2DISCOVARDovetail_10648:HG2_PB_SVrefine2PBcRplusDovetail_3276:HG2_PB_SVrefine2PB10Xhap12_10767:HG2_PB_SVrefine2Falcon2Bionano_7385:HG2_10X_SVrefine210Xhap12_10306:HG4_PB_SVrefine2Falcon1Dovetail_9070:HG2_PB_PB10Xdip_10001;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10306:HG2_PB_SVrefine2Falcon2Bionano_7385:HG2_PB_SVrefine2PB10Xhap12_10767:HG2_PB_SVrefine2PBcRplusDovetail_3276:HG3_Ill_SVrefine2DISCOVARDovetail_10648;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0555923;ClusterMaxSizeDiff=0.0555923;ClusterMaxEditDist=0.189286;PBcalls=10;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=2976;DistBack=8256;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=14:67083009-67083012;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1689.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:47:0|1:18:0:0:41:0|1:22:0:0:9:0/1:28:11:0/1:105:261:.:2916:.
chr14	67095891	HG2_Ill_250bpfermikitraw_19817	A	ATATTTATATACGTATATAAATATGTATATAAATATATATTTATATACGTATATAAATATGTATATAAATATATATT	20	PASS	ClusterIDs=HG2_PB_pbsv_14904:HG3_PB_HySA_22437:HG3_Ill_250bpfermikitraw_19228:HG2_Ill_250bpfermikitraw_19817:HG2_PB_HySA_27149:HG3_PB_pbsv_14556;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19817:HG3_Ill_250bpfermikitraw_19228;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0805369;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.201342;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=5;DistForward=34;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=165;REFWIDENED=14:67095795-67095959;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1690.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:34:0|1:31:2:10:31:./.:9:2:0:15:0/1:34:32:./.:.:.:.:.:.
chr14	67170332	HG2_PB_SVrefine2PBcRplusDovetail_3278	CC	TTTGGAATAATTTCAGAAGGAATGGTACCATCTCCTCTTTGTACTTCTGGTAGAATTCCACTGTGAATTCATCTGGTCCTGGGCTTTTTTTGGTTAGTATGCTATTAATTGCTGCCTCAATTTCAGAACTTGTTATTGGTCAATTCAGGGATTCAACTTCTTCCTGTTTAGTCTTGGAGGGTGTACATGTCCAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCCTAGAGGTGTTTATAGTATTCTCTAATGGTAGTTTGTATCTCTGTTGGATCTG	10	PASS	ClusterIDs=HG3_PB_pbsv_14558:HG2_PB_HySA_27150:HG2_PB_PB10Xdip_10009:HG2_PB_assemblyticsPBcR_7814:HG2_PB_SVrefine2PBcRplusDovetail_3278:HG2_PB_SVrefine2Falcon2Bionano_7387:HG2_PB_SVrefine2Falcon1plusDovetail_3517:HG4_PB_SVrefine2Falcon1Dovetail_9072;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_3278:HG2_PB_assemblyticsPBcR_7814;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0695652;ClusterMaxSizeDiff=0.0695652;ClusterMaxEditDist=0.177391;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=284;DistBack=-2;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:67170334-67170331;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.9861;PctRecOverlap=0.9792;SizeDiff=-4;StartDistance=4;EndDistance=5;GTMatch=0;TruScore=98;MatchId=1691.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:54:0|1:22:0:0:35:0|1:37:0:0:42:0/1:31:28:./.:.:.:.:.:.
chr14	67419863	HG2_PB_SVrefine2PBcRplusDovetail_3279	A	ACACCTTTTGCCCATTTTCTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTCTTTTTTTTTTCCTTTCTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGATTATGCGGTGTTTGGTTTTTTGTTCTTGCGATCGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGTGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTTCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTAGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGACAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGTGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGAGTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGCTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGTGGCTTTGAGTGAGATTCTTAATCCTGATTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTGTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCGGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGACGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGCTGGAATACCCTGCCGTGTGAGGTGTCAGTGTTCCCCTGGTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCAGTTCTCAGATCTCCAGCTGTGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTTGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTGGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTTGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3518:HG3_PB_pbsv_14559:HG2_Ill_breakscan11_4569:HG2_PB_pbsv_14907:HG2_PB_SVrefine2PBcRplusDovetail_3279:HG3_PB_SVrefine2PBcRDovetail_7033;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_3279;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0684757;ClusterMaxSizeDiff=0.0679968;ClusterMaxEditDist=0.206269;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=6090;DistBack=100034;DistForward=6747;DistMin=6747;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=14:67419864-67419881;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.9993;PctRecOverlap=0.9993;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1692.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:49:0|1:30:0:0:42:./.:32:0:0:4:0/1:27:10:0/1:214:618:.:5958:.
chr14	67862850	HG2_Ill_SVrefine2DISCOVARplusDovetail_3877	T	TTTTTGTTTTGTTTTGTTTTTTGTTTTTTTCTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTACAATGGTGCAATCTCAGCTCACTGCAAACTCCGGCTCCCAGGTTCAAGCAATTCTCCCACCTCAGCCTCCGGAGCAGCTGGGATTACAGGCGCCCACCACCACACCTGGCTAATTGTTGTATTTTTAGTAGAGACGTGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTACTGACCTCAGGTGATCGGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGACCCCATCCAGGTCACTTTGTGCTAAGTGTTCTATACTTGGTCAGCATTCTCATAAATACGGTGCATGGAATGGAACACGCAGCTCCAGGGGAAGCCTGAGCCCACTGGTTGTGGGCAGCTGCAGGGCACTGTAGACTCATTCAGTGCTGTCAGAAGAGAATCTTTTTCATTTAGGCCACTTCTCTATCTTTTAAGTGTACACTTATGGTTTTTTTTTTTTTAATCAGTTGTGGGATTGATAGGACACTATCAATCGGGTGGTAGGCTGGATCCATCACTTCTGTTGGAAAACAGAAGCATTTTATTTCATTCTGAATCTATTTTCCAAAGGATTCCCTCGGCTTATTATTTTGCTTACAAACTTAGTCAACGTCCCTCATCTAAACTAAATGGTGAATAAGACATGGCTGGTCTGGGCGCGGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCCGCCTCTATTAAAAATACAAAAACTAGCCGTGCGTGGTGGTGGGCACCTGTAGTCCCAGCTATTCAGGAGGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGCACCACTGCACTCTAACCTGGGTGACAGAGAGAGGCTCTGTTTCAAAAAAAAGACATGACTGGCTCATGATCCTAAAGAACACCACAGGCCGGGCTCAGTGGCTCACGCCTATAATCCCAACACTTTGGGAGGCAGAAGCCACACCCACCTCTCTCCATGTATACTCTTCTTACTTTTACTCAAGACATTCTACCTGTCCAGAATGACTGCCTCTCTCCTTGTTCCATCTTTGCCCACATCTCTATTCCTGAAGCGTTGCCTGACCCAGCCTGAAATATCTTTTTCCTCTTCAGCGATAAAGGGTTCTCTGCAGCTCCTGATAGCTGTGGCATCGTTGGAATGCCAAATATTTTTCAATTAACCACTTGCTTTCCCAATAAAATCAGCAACTCTATGAAGAAACAATCTTACCATTTTCTTCCTTGATTCCTCCATGCCTTGCAAATGTCTTGGCACATGATGGGCCCTTGATAAATAATTTATTGGGAGACTTTTTTTTTTTTTTTTTTTGAGGAGTCTCATTCTGTCGCCCAGGCTGGAGTGCAGTGGGTGATTTCGGCTTACTGCAAACTCTGCCTCCCAGGGTCAAGATCACTTGAGGTCAGGAGTTCAAGACGAGCCTGGCCAACACGGTCAAACCTCATCTCCACTAAAAATACAATTAGCTGGGCATGGTGCAAAATTGTGCCACTGAACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTAAATAAAAACACACACACACACCACGGAGCTGCTCCTCCAGTAGTAGTAGCTTGGCAGTGAGCTCATCACCACTGTGGAAGAACAGAGTTCAGCCAGCTTCCTGAACCCATGCTGTCAGCCTGCAGTTCACCATTTCAATGAACAGAATTTTAGGACACACTATAAAATTCCACGTAAAATTCTGGCACTCTTTTTACACGTTCTCAAATTTTAAAAAGTATGTGTGTATATATTTCATGATTTGTTCTTAGGGAATCTATTGGCTCCTCTTGATCTAGCCCAAGTACTCATGAACCAGGCAGGTGACAATTAGAGAATTTTATGTAGATTTTTTTTTTGTTTTTTGAGTTAGGGTCTTGCTCTGCCTCCCAGGCTAGAGTGAAGTGGCATGGTCATAGCTCACTGCAGCCTTGAGCTCCTGGGCTCAAGCAATCCACTTGCCTCAGGCTCCCAAAGTGTTGAGATAATAGGCGTGAGCCACTGCACCTGACCGTGTCTGGTCTTAAGATGCTAAAAGGAGGAGGATGCAGAGCCCATCTTTTCCCAGGCTCAGCATCCTCCAGTGGTCCTACAGCTACCCCAGCAGAAAGCTACCCCTGCCTGACTTCCCACTTTTAATCAGTGACACCTCCAAGCTTGCAATGGAAATAATGGAATGACATTTCATTTGTGCAGGCTCCTAGGCTGGAATGATGCTCGATGCCTCCTTTTCCCTTGCCCTCAACAGGCAGTCAGCCACCAAGTCCTGTTGACATTTCTTTCATAATGCTTTCTCCTGTTCATCCCTTCTTTTTGCCTTATTTCATGCCTACATTATTTTAATAGCTCCTTTTGTTTTTTATTTGAGAAAAATTTGAAATTACAGAAGAGTACAGAGGTAAACATAACAAATGCCAGTAAACCCACCACCCAGAATGAACCATCATTAATATTTTCTTATACTTAGAAGATTCCTTAATTGACCTCATTTGTTTTCAGTCTTTTTCTCTCCTGAACACGGCAAGCATAGGAGAGTCAAAGAAGAAAAACATGATAAGAAAGAAAACGGTGAGATTCCTTTTTATGGACCTAGAAATCTTATTAGTAACTGAACTAAAACTGGTTCTTCCTTTTATTCTTTCTACACTTTTTTTTTCAGAGACAGAGTCTCACTCTGTCACCCAGGCTACAGTGCAGTGGCACAATCATAGCTCACTGTAGTCTTGGACTCCTGGGTACAAGTGATCCTCCTGCCTCAGCCTCCAAACTTGCTGGGACTACCAACACCTGCCAACACGCCCATCCAGTTTTTTTTTTTTTTTTTTTAGAGATGGGGGTCTCACTATGTTGCCCAGGCAGGTCTTGAACTCCTGGGCTCAAGCTATCTTTCCATCTTGGCCTTCTGAAATGCTGACATTACAGGCGTGAGCCACTGTGCCAGGCCTACCTTTTTGTTTTTCGGAGATGTAGTCTCGCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGGCTTGAGTGATCCTCCCACCTCAGCCTCCTGAGCAGCTAGAATCACAGGTGTGTACCACCACAACCAGCCTTCATTTTGGTCTTTCTAAGAGAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3280:HG2_PB_PB10Xdip_10010:HG2_PB_SVrefine2Falcon1plusDovetail_3519:HG2_PB_SVrefine2PB10Xhap12_10771:HG3_PB_SVrefine2PBcRDovetail_7034:HG3_Ill_SVrefine2DISCOVARDovetail_10654:HG2_Ill_SVrefine2DISCOVARplusDovetail_3877:HG2_PB_SVrefine2Falcon2Bionano_7388;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3877:HG3_Ill_SVrefine2DISCOVARDovetail_10654;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0070563;ClusterMaxSizeDiff=0.0070563;ClusterMaxEditDist=0.0190155;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=3268;DistBack=40683;DistForward=2417;DistMin=2417;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=302;REFWIDENED=14:67862851-67863152;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9997;PctRecOverlap=0.9667;SizeDiff=1;StartDistance=-108;EndDistance=-108;GTMatch=0;TruScore=98;MatchId=1693.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:24:0|1:29:0:0:22:./.:13:0:0:2:0/1:26:10:0/1:101:197:.:3292:.
chr14	68822867	HG3_PB_SVrefine2Falcon1Dovetail_9038	T	TGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACAAGGTCAGGAGATCGAGACTATCCTGGCTAACAGGGTGAAACCCCGTCTCTACTAAATAAATACAAAAAATTAGCCGGGTGCAGTGGCGGGCGCCTGTGGTCCCAGCTACTCCGGAGGCTGAGGCGGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGGTTGTGTCACTGCACTCCAACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAGTTATGTTTACACTCTACTCTATTAAAAGTGCAATAGTATTATATTTTTTAAAAACAATATAGATTACCTAAATTTAAAATACTTAATTGCTAAAAAAAAAATGCTAGGGATCATCGGAGCCTTCAGTGAGTTATAATCTTGCTGGTGAAGGGTCTTGCCTTAGTGTTGAAGGTTGCTGACTGTTCAGGGGGTGGTTGCTGAAGGTTGGAGTGGCTGTAGCAATTTCTTAAAAAATGACAATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3521:HG2_PB_pbsv_14910:HG3_PB_pbsv_14562:HG2_PB_PB10Xdip_10011:HG3_PB_HySA_22443:HG2_10X_SVrefine210Xhap12_10312:HG3_PB_SVrefine2Falcon1Dovetail_9038:HG2_PB_SVrefine2PB10Xhap12_10773;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9038;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0879121;ClusterMaxSizeDiff=0.0879121;ClusterMaxEditDist=0.181179;PBcalls=7;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=546;DistBack=95831;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=853;REFWIDENED=14:68822868-68823720;PctSeqSimilarity=0.9958;PctSizeSimilarity=0.9963;PctRecOverlap=0.4753;SizeDiff=2;StartDistance=-286;EndDistance=-286;GTMatch=0;TruScore=82;MatchId=1694.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:31:./.:20:18:20:9:./.:4:1:3:27:0/1:6:27:0/1:8:23:.:.:.
chr14	69108278	HG2_PB_pbsv_14912	T	TAAGATGTTAGCTGTAGAGCCGGGCCGCGGTTCGGCTCATCGGCTGTAATCCCAGGCACTTGGGAGGCCGAGGCGGGTGGATCCACCGAGGTCCGGAACGAGCCTAATCCTGGCTAACACGGTGAAACCCGGTCCTACTAAAAATACAAAAAATTAGCCGGCGTGGTAGTCGGGCGCCTGTAGTCCCAGCTACTCGGAGTGAGCTGAGGCAGGGGAATGGCGTGACCGGGAGAGGAGCTTGCAGTGAGCCGTAGATCACGCCACTGCACTCCATCCTGGGCGAGCAGAGCCGAGACATCCGTCGTCAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3523:HG4_PB_pbsv_14853:HG2_PB_HySA_27157:HG2_PB_SVrefine2PB10Xhap12_10775:HG2_PB_pbsv_14912:HG2_PB_SVrefine2Falcon2Bionano_7391;NumClusterSVs=6;ExactMatchIDs=HG2_PB_pbsv_14912;NumExactMatchSVs=1;ClusterMaxShiftDist=0.160991;ClusterMaxSizeDiff=0.160991;ClusterMaxEditDist=0.273128;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=331;DistBack=395;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=14:69108279-69108295;PctSeqSimilarity=0.9464;PctSizeSimilarity=0.9668;PctRecOverlap=0.9698;SizeDiff=11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=1695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:31:1|0:2:24:20:2:./.:1:2:20:0:0/1:33:8:0/1:6:17:.:.:.
chr14	69109785	HG4_Ill_manta_3493	T	TTGCATAAAGTAGTCTTTAGATTTCTATTAAATTTAGTTGATTGCTGGTGTTGAGTTCAATAATGTTGCTACTAATTTTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4570:HG2_PB_pbsv_14913:HG4_PB_pbsv_14854:HG4_PB_HySA_21719:HG4_Ill_svaba_18505:HG4_Ill_manta_3493:HG4_Ill_Krunchall_20479:HG4_Ill_GATKHC_23656:HG4_Ill_250bpfermikitraw_19535:HG4_Ill_150bpfermikitraw_18819:HG2_PB_SVrefine2Falcon2Bionano_7392:HG2_Ill_svaba_18498:HG2_Ill_manta_4096:HG2_Ill_SpiralSDKrefine_5053:HG2_Ill_Krunchall_20172:HG2_Ill_GATKHC_23716:HG2_Ill_250bpfermikitraw_19827:HG2_Ill_150bpfermikitraw_18695:HG2_10X_SVrefine210Xhap12_10314;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10314:HG2_Ill_150bpfermikitraw_18695:HG2_Ill_250bpfermikitraw_19827:HG2_Ill_GATKHC_23716:HG2_Ill_Krunchall_20172:HG2_Ill_SpiralSDKrefine_5053:HG2_Ill_manta_4096:HG2_Ill_svaba_18498:HG2_PB_SVrefine2Falcon2Bionano_7392:HG4_Ill_150bpfermikitraw_18819:HG4_Ill_250bpfermikitraw_19535:HG4_Ill_GATKHC_23656:HG4_Ill_Krunchall_20479:HG4_Ill_manta_3493:HG4_Ill_svaba_18505;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0853659;ClusterMaxSizeDiff=0.0731707;ClusterMaxEditDist=0.170732;PBcalls=4;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=79;DistBack=2;DistForward=4992;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=14:69109786-69109788;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:1|0:2:21:21:1:1|0:0:51:27:0:0/1:39:35:./.:.:.:.:.:.
chr14	69332829	HG2_PB_PB10Xdip_10012	GGG	TTTTTTTTTTTTTTTTTTTTCCAAGACAGAGTCTTACTCTGCTGAGTGCAGTGGTGGGATCTCAGCTCACTGCAACCTCCACCTCCTGGGCTCAAGCAATTCTTATGCCTCAGCCTCCCTGAGTAGCTGGGACTACAGGCATGTGCCAACATGCCCAGCTAATTTTTTATATTTTAGTAGAGACGAGGTTTCGCCATGTTGCACAGGCTGGTCTCGAACTCCTGAGCTCAGGCAATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACGGGCATGAGCCATCACACCCAGCTTATCCTTCTATCTTTACCAGCTTAGATTGGGTTTTAAGTTTCCTGCACCCAGAAGGGTCCTAACCACTACACAATCTAACGGTTACTGTCACCCACAAATGACAGTGGGTTGGGTACATTGATGACTTATTACATTTATTATCTCATGCCGATTGTACATAAAACCAAATTATTCCCACCTCCACTTCTCTCTCTCCTCCCGACCATCATGGCCCCCAAACTTTGCTGTCCTGTACAGAGCACTGGGCTACAAGTCAGGAGACCTGGGTTCTCACCTTAGCTCTGCCTCAGGCCCTGTGACTTACAGCAAGGCAACCCATGCTCCCAGGCCTTGGTTTTCTCCTACAATGATTGGGAAGGTTGGACTCCATGACTTCAAAGGTGTTTCCAACACTAACATTCTATGGACATTCTTCTCCTTCTTCAACTGCATTTAGCCAGTCACTGAGGACCACAGAAGTTCCCTTGGAAATCTCTAACCCATTCCTTCTGCATTCCCCATTTCTATTACCTATATAAGAAGAATGGGTTTCTCTCTTTCTTCTTTAAATGCTGCTTTCACCATGGAGTGCAAATTTGGAACTAAAAAGAATCTTGCAGTGAGTACAGCCCAGGAAGCCCCCTCACTCCCTCACCACCAGAAGATTCTGGAAAAGCAAGCGGAGATTTCCATTCATTTTGATCCTCAAAGTCCCAAATCAGCCTCAACCACTTGATCTTACCAAACCACTCAGTGTTAGGGGTCGTGTCCTGCCCATCTCTCACAGTCCTTATAACATTTGCGTTGAGTAGGACTTGGGTTACAAATCCAATCCCAAATCCACCTGCATTAACTCAAATTAGAGAAGGGAAATAAATGCACCTGTAATCCCAGCTATTCAGGAGGTTGAACCAGGAAGATCGCTTGAGCCCAGGAGGTCAAGGCTGCAGTGAGCTATGATTGCACCACTGCACTTCAGCCTGGGTGACAGAGTGAGACCCCATCTCTTAAAAAAAAAGAAAAAATTAAGTTTTGCTTAAAAAAAGAAAGAAAGAAAAGGAAAATGTGTCACGAGGTACCAGGATACAATTCATGTCACTCACCCACAGGCTCGGGCTGACACGTGGCAGGATCTCTTCTCCACTGTGAGCATTGCTTCATTCTTCTCTCGTCAGAGACCGGCTTTCCGTGCTTCACAGCCACATTGGCAGAAAACCACCAGCTTCTGAGCTCCCAAGTTATCAGTTCAGCCCGAGATTGAAGTAACTCTTTTCAGCTGCATCACCACACTGCTGAATCACATTTAGAGTCTTCTCGGCCTCTTTTCCATGTGGTCCCACCATATCTTCCCACCTTGGAGACAGGTTTCGGTTTTTTAGACCCAGTTTCAGGGTTTTATGTTTATTACTATGAAATGTAGCCTTGTAAGATTACTCCCATCATGACTGCCTATTAAGGTCTTTTTGAACCTCAAATCTCCCACTTACTTTATTGGCTTCAAAATGGCCATGAGTTTGATGAGTCCAAGTCATTAAGAAAAATGACTGGCTGGGAATAATCACTGGTCCTCACAGCATGCAGAAATGTCCCTGCAAGTTGTCAGATGCATAAGCCAGCACATTCTGGCATGTTGGTTTCCACAGCCATTTAGTCCTCTAGTGGGACTCTCCATCCACTCCCCTTTCCCCATCGTTCCCACCAGGATTAGAGGAGACGCTGCTTGTCTGAATTTCAGCAAGGACAGAGACATCTTCATATTGCTCTTCTGTAGAGCCTGGTATCCAACCCCAAAAGAAGAGTTAATCAAGCAGAGCCTCTTCTACCTGGGACTGGGCTGGGCCCAAGGATCCCTGTATCTTTTTTTGGGGGGGGGGGT	20	PASS	ClusterIDs=HG4_PB_pbsv_14855:HG4_PB_SVrefine2Falcon1Dovetail_9076:HG3_PB_pbsv_14565:HG3_PB_assemblyticsfalcon_8112:HG2_PB_SVrefine2Falcon2Bionano_7393:HG3_PB_SVrefine2Falcon1Dovetail_9040:HG2_PB_SVrefine2Falcon1plusDovetail_3524:HG2_PB_SVrefine2PB10Xhap12_10776:HG2_PB_PB10Xdip_10013:HG2_PB_PB10Xdip_10012:HG3_Ill_SVrefine2DISCOVARDovetail_10660:HG2_10X_SVrefine210Xhap12_10315:HG2_Ill_SVrefine2DISCOVARplusDovetail_3889:HG2_PB_assemblyticsPBcR_7822:HG2_PB_SVrefine2PBcRplusDovetail_3283:HG4_Ill_SVrefine2DISCOVARDovetail_10511:HG4_PB_SVrefine2PBcRDovetail_7416:HG4_PB_HySA_21721;NumClusterSVs=18;ExactMatchIDs=HG2_PB_PB10Xdip_10012:HG2_PB_PB10Xdip_10013:HG2_PB_SVrefine2PB10Xhap12_10776;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0560237;ClusterMaxSizeDiff=0.0555682;ClusterMaxEditDist=0.254011;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=2148;DistBack=-3;DistForward=-1;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:69332832-69332828;PctSeqSimilarity=0.9998;PctSizeSimilarity=1;PctRecOverlap=0.9986;SizeDiff=0;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=99;MatchId=1697.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:35:0:13:1/1:0:8:0:8:1/1:0:20:1/1:14:293:.:2249:.
chr14	69780312	HG3_Ill_SVrefine2DISCOVARDovetail_10665	C	CCAGTAGTGTTGGAAAGCTGTGCAGTCATCAGTACCCCTGGAGGAGTCATATTAGGATGTGTTGGGAAATCTAACTGGAGGCCTTAGGTGGGTTTCCCCAGGCAGCTCCTATCTCGTGTTCTGGATATGTAATTAAACTAGGGCCTCCCAGGCCTGTGGGA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3890:HG2_PB_pbsv_14916:HG2_PB_HySA_27161:HG3_PB_pbsv_14567:HG3_PB_HySA_22449:HG3_Ill_SVrefine2DISCOVARDovetail_10665:HG2_PB_SVrefine2Falcon2Bionano_7394;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3890:HG3_Ill_SVrefine2DISCOVARDovetail_10665:HG2_PB_SVrefine2Falcon2Bionano_7394;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0685358;ClusterMaxSizeDiff=0.0436137;ClusterMaxEditDist=0.272446;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=160;DistBack=93341;DistForward=80;DistMin=80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=171;REFWIDENED=14:69780313-69780483;PctSeqSimilarity=0.9973;PctSizeSimilarity=1;PctRecOverlap=0.8509;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=94;MatchId=1698.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:38:0|1:35:1:1:37:./.:3:0:2:20:0/1:11:13:./.:.:.:.:.:.
chr14	70864683	HG2_Ill_Krunchall_20185	G	GATGAGTGTTCGGCTCCTAGCAGAGACAGTAGCTCTTCTCTGCTAGGGAGGTCATCCCA	20	PASS	ClusterIDs=HG2_PB_HySA_27171:HG3_PB_pbsv_14572:HG4_Ill_svaba_18516:HG2_PB_pbsv_14920:HG4_Ill_Krunchall_20490:HG4_PB_pbsv_14860:HG4_Ill_GATKHC_23668:HG4_PB_HySA_21732:HG4_Ill_GATKHCSBGrefine_10251:HG4_Ill_250bpfermikitraw_19545:HG4_Ill_150bpfermikitraw_18830:HG3_Ill_svaba_18663:HG3_Ill_manta_3349:HG3_Ill_Krunchall_19764:HG3_Ill_GATKHC_23582:HG3_Ill_GATKHCSBGrefine_9797:HG3_Ill_250bpfermikitraw_19247:HG3_Ill_150bpfermikitraw_18726:HG2_Ill_svaba_18509:HG2_Ill_Krunchall_20185:HG2_Ill_GATKHC_23729:HG2_Ill_GATKHCSBGrefine_9907:HG2_Ill_250bpfermikitraw_19837:HG3_PB_HySA_22457;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19837:HG2_Ill_GATKHCSBGrefine_9907:HG2_Ill_GATKHC_23729:HG2_Ill_Krunchall_20185:HG2_Ill_svaba_18509:HG3_Ill_150bpfermikitraw_18726:HG3_Ill_250bpfermikitraw_19247:HG3_Ill_GATKHCSBGrefine_9797:HG3_Ill_GATKHC_23582:HG3_Ill_Krunchall_19764:HG3_Ill_manta_3349:HG3_Ill_svaba_18663:HG4_Ill_150bpfermikitraw_18830:HG4_Ill_250bpfermikitraw_19545:HG4_Ill_GATKHCSBGrefine_10251:HG4_Ill_GATKHC_23668:HG4_Ill_Krunchall_20490:HG4_Ill_svaba_18516;NumExactMatchSVs=18;ClusterMaxShiftDist=0.114754;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.341463;PBcalls=6;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=2472;DistForward=165;DistMin=165;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=168;REFWIDENED=14:70864684-70864851;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1699.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:40:./.:19:22:13:14:./.:7:0:2:18:0/1:22:18:./.:.:.:.:.:.
chr14	71197776	HG2_PB_SVrefine2PB10Xhap12_10784	T	TAAGAATAATAGGACATTTGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTGACGGTCGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACGGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGTGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAGCAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACCTTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCGTAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_27175:HG2_PB_PB10Xdip_10023:HG3_PB_SVrefine2Falcon1Dovetail_9047:HG2_PB_SVrefine2PBcRplusDovetail_3287:HG2_PB_SVrefine2PB10Xhap12_10784:HG2_PB_SVrefine2Falcon1plusDovetail_3529:HG2_Ill_breakscan11_4571;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10784;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0116537;ClusterMaxSizeDiff=0.0116537;ClusterMaxEditDist=0.0215018;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=6078;DistBack=29267;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=14:71197777-71197799;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9982;PctRecOverlap=0.9984;SizeDiff=-11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1700.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:53:0|1:25:2:3:18:./.:1:1:34:0:0/1:30:9:0/1:204:745:.:.:.
chr14	71280209	HG3_PB_SVrefine2Falcon1Dovetail_9048	C	CTGGGAGGCCGAGATGGGTGGACCACTTGAGCTGAGGAGTTCAAGACCAGCCTGGGCAACATGGTGAAACCCCATCTCTACAAAATAGAAAAATTAGCCAGGCATGGTGGTGCCTGTGGTCCTAGCTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3530:HG3_PB_pbsv_14575:HG4_PB_HySA_21737:HG4_PB_pbsv_14864:HG3_Ill_MetaSV_1609:HG3_Ill_250bpfermikitraw_19254:HG3_PB_HySA_22462:HG2_PB_HySA_27177:HG4_PB_SVrefine2PBcRDovetail_7421:HG4_PB_SVrefine2Falcon1Dovetail_9082:HG4_Ill_SVrefine2DISCOVARDovetail_10520:HG3_PB_SVrefine2Falcon1Dovetail_9048:HG3_Ill_SVrefine2DISCOVARDovetail_10673;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3530:HG4_PB_SVrefine2Falcon1Dovetail_9082:HG4_Ill_SVrefine2DISCOVARDovetail_10520:HG3_PB_SVrefine2Falcon1Dovetail_9048:HG3_Ill_SVrefine2DISCOVARDovetail_10673;NumExactMatchSVs=5;ClusterMaxShiftDist=0.168;ClusterMaxSizeDiff=0.16;ClusterMaxEditDist=0.240602;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=128;DistBack=169;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=163;REFWIDENED=14:71280210-71280372;PctSeqSimilarity=0.9964;PctSizeSimilarity=1;PctRecOverlap=0.9302;SizeDiff=0;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=97;MatchId=1701.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:31:0|1:31:0:2:29:./.:4:0:2:15:0/1:18:17:./.:.:.:.:.:.
chr14	71328812	HG2_Ill_GATKHCSBGrefine_9916	A	AAAGGGAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGG	20	PASS	ClusterIDs=HG4_PB_pbsv_14867:HG2_PB_SVrefine2Falcon2Bionano_7399:HG2_Ill_breakscan11_4572:HG4_Ill_svaba_18529:HG4_Ill_Krunchall_20504:HG4_Ill_GATKHC_23684:HG4_Ill_GATKHCSBGrefine_10262:HG4_Ill_250bpfermikitraw_19558:HG2_Ill_svaba_18520:HG2_Ill_manta_4101:HG2_Ill_GATKHC_23742:HG2_Ill_GATKHCSBGrefine_9916;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9916:HG2_Ill_GATKHC_23742:HG2_Ill_manta_4101:HG2_Ill_svaba_18520:HG4_Ill_250bpfermikitraw_19558:HG4_Ill_GATKHCSBGrefine_10262:HG4_Ill_GATKHC_23684:HG4_Ill_Krunchall_20504:HG4_Ill_svaba_18529;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.311927;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=10;DistForward=12;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=100;REFWIDENED=14:71328781-71328880;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1702.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:25:0|1:37:3:2:18:./.:2:18:13:0:0/1:24:9:./.:.:.:.:.:.
chr14	71480267	HG2_Ill_GATKHCSBGrefine_9918	T	TCTGTTTCCCTGGTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCCGGCGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_27184:HG3_PB_pbsv_14580:HG2_PB_PB10Xdip_10024:HG2_PB_pbsv_14931:HG4_Ill_GATKHCSBGrefine_10264:HG4_PB_pbsv_14869:HG3_PB_SVrefine2Falcon1Dovetail_9051:HG3_PB_assemblyticsfalcon_8134:HG3_PB_HySA_22470:HG4_PB_SVrefine2Falcon1Dovetail_9086:HG3_Ill_MetaSV_1612:HG3_Ill_GATKHCSBGrefine_9802:HG2_PB_SVrefine2PB10Xhap12_10789:HG2_PB_SVrefine2Falcon1plusDovetail_3534:HG2_Ill_GATKHCSBGrefine_9918:HG2_PB_SVrefine2Falcon2Bionano_7401:HG4_PB_HySA_21742;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9918:HG2_PB_SVrefine2Falcon1plusDovetail_3534:HG2_PB_SVrefine2PB10Xhap12_10789:HG3_Ill_GATKHCSBGrefine_9802:HG3_Ill_MetaSV_1612;NumExactMatchSVs=5;ClusterMaxShiftDist=0.166163;ClusterMaxSizeDiff=0.165926;ClusterMaxEditDist=0.240713;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=333;DistBack=19123;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=14:71480268-71480284;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:28:1|0:2:32:20:1:0|1:33:0:0:7:0/1:36:19:0/1:13:35:.:.:.
chr14	72466391	HG3_Ill_Krunchall_19791	T	TCATGAGCTCTGGTTGTTTAAAAGTGTGTAGCACTTCCCCTCTCTCTTTCTCGTGCTCTGGACATGTGAATTGCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10331:HG2_PB_HySA_27194:HG2_PB_pbsv_14933:HG3_PB_pbsv_14582:HG3_PB_HySA_22477:HG3_PB_SVrefine2Falcon1Dovetail_9053:HG3_Ill_Krunchall_19791:HG3_Ill_GATKHC_23605:HG3_Ill_GATKHCSBGrefine_9803:HG3_Ill_250bpfermikitraw_19268:HG2_PB_SVrefine2Falcon2Bionano_7403:HG2_Ill_SVrefine2DISCOVARplusDovetail_3910:HG2_Ill_Krunchall_20209:HG2_Ill_GATKHC_23754:HG2_Ill_GATKHCSBGrefine_9919:HG2_Ill_250bpfermikitraw_19859;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10331:HG3_PB_SVrefine2Falcon1Dovetail_9053:HG3_Ill_Krunchall_19791:HG3_Ill_GATKHC_23605:HG3_Ill_GATKHCSBGrefine_9803:HG3_Ill_250bpfermikitraw_19268:HG2_PB_SVrefine2Falcon2Bionano_7403:HG2_Ill_SVrefine2DISCOVARplusDovetail_3910:HG2_Ill_Krunchall_20209:HG2_Ill_GATKHC_23754:HG2_Ill_GATKHCSBGrefine_9919:HG2_Ill_250bpfermikitraw_19859;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0897436;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.1875;PBcalls=6;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=74;DistBack=63658;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=74;REFWIDENED=14:72466392-72466465;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1704.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:22:0|1:27:0:3:26:0|1:6:0:1:18:0/1:18:20:./.:.:.:.:.:.
chr14	72911465	HG3_PB_SVrefine2Falcon1Dovetail_9054	T	TGGGAGAAGACCCCAGGTTGATGACCCCTGGTTTAGGAGTGCATATGGCAGGATGCTTGAGGGATCACTGGGCCCAAAATCGTATTTGCTGTGTCTGGATGTAATGCCTCCCACCTGTTCAAGACCCACCTGTTCAACCCTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10333:HG3_PB_pbsv_14583:HG2_PB_pbsv_14934:HG3_Ill_250bpfermikitraw_19270:HG2_PB_HySA_27195:HG3_PB_HySA_22479:HG3_Ill_150bpfermikitraw_18745:HG3_PB_SVrefine2Falcon1Dovetail_9054:HG3_Ill_SVrefine2DISCOVARDovetail_10680;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10333:HG3_PB_SVrefine2Falcon1Dovetail_9054:HG3_Ill_SVrefine2DISCOVARDovetail_10680;NumExactMatchSVs=3;ClusterMaxShiftDist=0.062069;ClusterMaxSizeDiff=0.0277778;ClusterMaxEditDist=0.227586;PBcalls=5;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=141;DistBack=7412;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=125;REFWIDENED=14:72911466-72911590;PctSeqSimilarity=0.989;PctSizeSimilarity=1;PctRecOverlap=0.7163;SizeDiff=0;StartDistance=-40;EndDistance=-40;GTMatch=0;TruScore=90;MatchId=1705.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:22:0|1:16:2:1:23:./.:4:0:0:19:0/1:29:20:./.:.:.:.:.:.
chr14	73703671	HG2_Ill_GATKHC_23761	A	AAAGAGGAAGGGAGGGAGGGAAAGAAAGAAGAAAGTGAGGGAGGAAAGTAGAAAGAAAGAG	20	PASS	ClusterIDs=HG3_PB_pbsv_14585:HG3_Ill_GATKHC_23617:HG3_Ill_GATKHCSBGrefine_9804:HG2_PB_assemblyticsPBcR_7847:HG2_Ill_GATKHC_23761:HG3_PB_HySA_22483;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHC_23761:HG2_PB_assemblyticsPBcR_7847:HG3_Ill_GATKHCSBGrefine_9804:HG3_Ill_GATKHC_23617;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0495868;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.130081;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=60;DistBack=-57904;DistForward=10;DistMin=-57904;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=135;REFWIDENED=14:73703571-73703705;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:39:0|1:17:4:2:29:./.:6:0:3:3:0/1:22:10:./.:.:.:.:.:.
chr14	73799449	HG2_10X_SVrefine210Xhap12_10337	CA	GTTGAAATGATGTTTTTAAAAAGGAAATAAAAAAGATTTATTCAGCACTTCTAGGTTTTTGTATTCAGAATTCAGAGTATTTCTTTTTTTTCTTTTTCCTTGAGATGGAGTTTCGCACTTGTTGCCCAAGCTGGAGTGCAATGGCACGATCTCAGCTCACCACAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGACTCCCGAGTAGCTGGAATTACAGGCATGCGCCACGATGTCCAGCTAATTTTGTGTTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACTTCAGGTCATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGCCCGGCCTGTATTCAGAGTATTTCTATGTTAAGTTAATCCACAGTCTCCCAGAACCAACCAGACCAACTGGTTTTTCTACTGATTTCAGGATATCTTACAAGTAACCAACATACTAAAATTTCCTATCATTTAAAACCACTTTTTGGTTGATTCTCTTGGGTTTTTCAGATAGATATCATCTGTAGAGACAAATATGAAAAAACTTTATTCTTGCTTTCCAACATTTACAATATTTATTTTTTTGTCCAACAGACCACTACTTCTAACCCAGTGTTGAACACGGGTGTCTGAGAGCATCCTCGTCTTCCTCCCAAATTAACTGCATATGTTTCACCATTATGCATGACTCTGGGACAGTTTTTCAATCATTTAAACAATGTATTATGCTATTCCTATTATGCTAAGATTTATAAGGACTGAATAATAAATACTTTTTAAGGCTTTTAAATTTGAGATGTAATTCACACCACATAAAATTAATCATTTTAAAGTAAACAATTCAGGACGGGCATGGTGGCTCAAGCCTGTAATCCCAGCATTTCGGGAGGCTGAGGCAGGAGCATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGTGAAACCCTGTCTCTTCCAAAAATACAAAAGTTAGCTGGGTGTGGTGGCACATGCCTGTAATCCCAGCCACTCGGGAAGCTGAGGCATGAGACTCGCTTGAACCCAGGAGGTGAAGGTTGCAGTGAGCCAAGATTGCACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTACCTTAAGAAAAATAAACAATAAACAATTCAGTGGTAGTTAGTATACTCACAACACTGTAGAACCACCACCTTTATCTAGTTCCAAAACATTTTCTTGCACCAAAAGGAAAACTTGTAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10030:HG4_PB_pbsv_14875:HG2_PB_pbsv_14940:HG3_PB_assemblyticsfalcon_8146:HG3_PB_SVrefine2Falcon1Dovetail_9056:HG2_PB_SVrefine2Falcon2Bionano_7406:HG2_10X_SVrefine210Xhap12_10337:HG2_PB_SVrefine2PB10Xhap12_10793:HG4_PB_SVrefine2Falcon1Dovetail_9089:HG4_PB_SVrefine2PBcRDovetail_7426:HG4_PB_HySA_21753:HG2_PB_HySA_27202:HG4_Ill_Spiral_1155:HG2_Ill_Spiral_988:HG2_PB_HySA_27201;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10337:HG2_PB_SVrefine2Falcon2Bionano_7406;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0494208;ClusterMaxSizeDiff=0.0486486;ClusterMaxEditDist=0.152091;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1271;DistBack=0;DistForward=1;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:73799451-73799448;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9992;PctRecOverlap=0.9976;SizeDiff=-1;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=99;MatchId=1708.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:38:0|1:35:0:0:34:1|0:0:16:25:0:0/1:37:27:0/1:61:103:.:1350:.
chr14	73820292	HG2_Ill_GATKHCSBGrefine_9922	G	GGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTACATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGCAAAACCCTGTCTCTACCAAAAATACAAAAATTAGCCAGGCATGTTGGTGCCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10338:HG3_PB_pbsv_14588:HG2_PB_PB10Xdip_10034:HG2_PB_pbsv_14942:HG2_PB_assemblyticsPBcR_7850:HG4_PB_pbsv_14876:HG2_PB_HySA_27204:HG3_PB_HySA_22484:HG4_Ill_MetaSV_1568:HG4_Ill_GATKHCSBGrefine_10268:HG3_Ill_Spiral_15447:HG3_Ill_MetaSV_1616:HG3_Ill_GATKHCSBGrefine_9807:HG2_PB_SVrefine2PBcRplusDovetail_3293:HG2_PB_SVrefine2PB10Xhap12_10794:HG2_PB_SVrefine2Falcon2Bionano_7407:HG2_PB_SVrefine2Falcon1plusDovetail_3538:HG2_Ill_GATKHCSBGrefine_9922:HG4_PB_SVrefine2Falcon1Dovetail_9090:HG4_Ill_SVrefine2DISCOVARDovetail_10534:HG2_Ill_SVrefine2DISCOVARplusDovetail_3915;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9922:HG2_PB_SVrefine2Falcon1plusDovetail_3538:HG2_PB_SVrefine2Falcon2Bionano_7407:HG2_PB_SVrefine2PB10Xhap12_10794:HG2_PB_SVrefine2PBcRplusDovetail_3293:HG3_Ill_GATKHCSBGrefine_9807:HG3_Ill_MetaSV_1616:HG3_Ill_Spiral_15447:HG4_Ill_GATKHCSBGrefine_10268:HG4_Ill_MetaSV_1568;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0996441;ClusterMaxSizeDiff=0.0925267;ClusterMaxEditDist=0.286713;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=135;DistBack=2;DistForward=10;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=46;REFWIDENED=14:73820274-73820319;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:2:37:2:11:1/1:0:16:1:8:1/1:0:44:./.:.:.:.:.:.
chr14	74186531	HG2_Ill_GATKHCSBGrefine_9923	G	GCTCATGCCCTGTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4574:HG2_PB_pbsv_14946:HG4_PB_pbsv_14881:HG2_PB_HySA_27208:HG2_PB_assemblyticsfalcon_8151:HG2_PB_SVrefine2Falcon2Bionano_7410:HG2_PB_SVrefine2Falcon1plusDovetail_3541:HG4_Ill_MetaSV_1570:HG2_Ill_MetaSV_1500:HG2_Ill_GATKHCSBGrefine_9923:HG4_PB_SVrefine2PBcRDovetail_7429:HG4_PB_SVrefine2Falcon1Dovetail_9093:HG4_PB_HySA_21758;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9923:HG2_Ill_MetaSV_1500:HG4_Ill_MetaSV_1570;NumExactMatchSVs=3;ClusterMaxShiftDist=0.167472;ClusterMaxSizeDiff=0.164251;ClusterMaxEditDist=0.219002;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=15485;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=14:74186532-74186546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1710.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:27:0|1:39:0:0:20:1|0:0:10:32:0:0/1:21:5:./.:4:44:.:.:.
chr14	74666850	HG2_10X_SVrefine210Xhap12_10345	T	TGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCATAGGTCAAAAGATCGAGACCATCCTGGCCAATATGGTGAAACCTCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCACGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAATAAATAAATAAATAAAAAAGAATCTCCTGGCCAGGC	20	PASS	ClusterIDs=HG2_Ill_Spiral_989:HG4_PB_pbsv_14882:HG3_PB_HySA_22491:HG4_PB_HySA_21762:HG2_PB_HySA_27211:HG3_PB_pbsv_14591:HG2_PB_pbsv_14948:HG2_PB_PB10Xdip_10042:HG2_PB_PB10Xdip_10041:HG4_Ill_manta_3497:HG4_Ill_MetaSV_1572:HG4_Ill_GATKHCSBGrefine_10269:HG3_Ill_MetaSV_1619:HG3_Ill_GATKHCSBGrefine_9808:HG2_Ill_MetaSV_1501:HG2_Ill_GATKHCSBGrefine_9924:HG4_PB_SVrefine2PBcRDovetail_7430:HG4_PB_SVrefine2Falcon1Dovetail_9094:HG4_Ill_SVrefine2DISCOVARDovetail_10540:HG3_PB_SVrefine2Falcon1Dovetail_9058:HG3_Ill_SVrefine2DISCOVARDovetail_10687:HG2_PB_SVrefine2PBcRplusDovetail_3296:HG2_PB_SVrefine2PB10Xhap12_10798:HG2_PB_SVrefine2Falcon2Bionano_7412:HG2_PB_SVrefine2Falcon1plusDovetail_3543:HG2_Ill_SVrefine2DISCOVARplusDovetail_3920:HG2_10X_SVrefine210Xhap12_10345:HG4_Ill_Spiral_1156:HG3_Ill_Spiral_15454;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10345:HG2_Ill_SVrefine2DISCOVARplusDovetail_3920:HG2_PB_SVrefine2Falcon1plusDovetail_3543:HG2_PB_SVrefine2Falcon2Bionano_7412:HG2_PB_SVrefine2PB10Xhap12_10798:HG2_PB_SVrefine2PBcRplusDovetail_3296:HG3_Ill_SVrefine2DISCOVARDovetail_10687:HG3_PB_SVrefine2Falcon1Dovetail_9058:HG4_Ill_SVrefine2DISCOVARDovetail_10540:HG4_PB_SVrefine2Falcon1Dovetail_9094:HG4_PB_SVrefine2PBcRDovetail_7430;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0815047;ClusterMaxSizeDiff=0.0752351;ClusterMaxEditDist=0.229102;PBcalls=15;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=306;DistBack=17647;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=289;REFWIDENED=14:74666851-74667139;PctSeqSimilarity=0.9795;PctSizeSimilarity=0.9903;PctRecOverlap=0.7314;SizeDiff=-3;StartDistance=-82;EndDistance=-82;GTMatch=0;TruScore=90;MatchId=1711.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:2:16:0:25:1/1:0:6:0:6:1/1:0:30:1/1:1:37:.:.:.
chr14	74928512	HG2_PB_SVrefine2PB10Xhap12_10799	A	AGTGGCTCATGTCTGTAATGCCAGCACTTTGGGAGGCTGAAGTGGGCAAGATTGCTTGAGCTCAGGAGTTTGAGGCCAGCCTGGGCAACATGGCGAAACCCTATCTCAACAAAAAATACAAAAAAAATTTAGCTGGTCTTGGTGGCACATGCCTGTAGTCCTAGCTACTTGGAAGGCTGAGGCAGGAGGATTGCTTGAGCCTGGAAGATCAAGGCTGCAGTGGGCCATGGTCACACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACCATGTCTCAAAAGAAAAAAAAAAAAATTCTGAGGGTCAGGCATCAGGAAGTAGCTAGGCAAGATGGCTCAGGTCCCTTTCATGCGGCTGCAGTCAAGAGGGGGCTGCAGTTTCCTGAAGGTTTGACCGGAGCTGGAAAATCTGTTTCCAACATGGTTCACTCATGTGGCTATTGGCAAGAAGCCTTAATTCCTCACCATGTGGGCCTTATCACATGCAGCAAGCTTCCTGCAGAGTGACTGATCAGGCAGAAAGAGGCTAAAATGGAAGCTACAATGTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCCCTTGTCACCCAGCCTGGAGTGCAATGGCGTGATCTCGACTCACTGCAACCTCCGTCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGGCGCCCGACACCACGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCTGTGTTGGCCAGGCTGGTCTCAAACTTCCGATCTCAGGTGATCCGCCCACCTTGGCCTCTCAAATTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGCTACAATGTATTTTATACAGATGATCCCTGACTTACAATGCTTCCACTTAAAATTTTCAACTTTACAATGGTGCAAAAATAATATGCATTAAGTAGAAACCATACTTCGAATTTTGAATTTTGATCTTTTCATAGGCTGGCAATATACAGTATGATACTCTCTTGTGATGCTGGACAGTAGTAGAAAGTGCTAGCTCCCAGTCAGCCATGCAATCACAAGGGTAAACAGCCAATACTCGGCCAGGCGTCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7413:HG2_PB_pbsv_14949:HG4_PB_HySA_21764:HG4_PB_pbsv_14883:HG3_PB_HySA_22494:HG4_Ill_MetaSV_1573:HG4_Ill_GATKHCSBGrefine_10270:HG3_Ill_GATKHCSBGrefine_9809:HG2_Ill_GATKHCSBGrefine_9925:HG3_Ill_MetaSV_1620:HG2_Ill_MetaSV_1502:HG2_PB_HySA_27213:HG2_PB_PB10Xdip_10044:HG2_PB_PB10Xdip_10043:HG3_PB_SVrefine2Falcon1Dovetail_9059:HG4_PB_SVrefine2PBcRDovetail_7431:HG4_PB_SVrefine2Falcon1Dovetail_9095:HG4_Ill_SVrefine2DISCOVARDovetail_10543:HG3_Ill_SVrefine2DISCOVARDovetail_10690:HG2_PB_SVrefine2PBcRplusDovetail_3297:HG2_PB_SVrefine2PB10Xhap12_10799:HG2_PB_SVrefine2Falcon1plusDovetail_3544:HG2_Ill_SVrefine2DISCOVARplusDovetail_3923:HG2_10X_SVrefine210Xhap12_10347;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10347:HG2_Ill_SVrefine2DISCOVARplusDovetail_3923:HG2_PB_SVrefine2Falcon1plusDovetail_3544:HG2_PB_SVrefine2PB10Xhap12_10799:HG2_PB_SVrefine2PBcRplusDovetail_3297:HG3_Ill_SVrefine2DISCOVARDovetail_10690:HG4_Ill_SVrefine2DISCOVARDovetail_10543;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0674956;ClusterMaxSizeDiff=0.0639432;ClusterMaxEditDist=0.210804;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=1095;DistBack=8413;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=290;REFWIDENED=14:74928513-74928802;PctSeqSimilarity=0.9862;PctSizeSimilarity=0.9954;PctRecOverlap=0.8721;SizeDiff=5;StartDistance=-138;EndDistance=-138;GTMatch=0;TruScore=95;MatchId=1712.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:25:2:32:./.:0:3:0:4:1/1:0:17:0/1:20:150:.:1145:.
chr14	75499568	HG3_PB_assemblyticsfalcon_8157	GGAAAGATAGATT	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10046:HG3_PB_pbsv_14593:HG2_PB_pbsv_14951:HG4_PB_assemblyticsfalcon_8054:HG3_PB_assemblyticsfalcon_8157:HG4_PB_HySA_21768:HG4_PB_pbsv_14885:HG2_PB_SVrefine2Falcon2Bionano_7414:HG4_Ill_GATKHCSBGrefine_10271:HG2_PB_HySA_27214:HG3_PB_SVrefine2Falcon1Dovetail_9061:HG3_Ill_MetaSV_1622:HG2_Ill_breakscan11_4575:HG2_PB_SVrefine2PB10Xhap12_10801;NumClusterSVs=14;ExactMatchIDs=HG3_PB_assemblyticsfalcon_8157:HG4_PB_assemblyticsfalcon_8054;NumExactMatchSVs=2;ClusterMaxShiftDist=0.182104;ClusterMaxSizeDiff=0.178964;ClusterMaxEditDist=0.263736;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=298;DistBack=44;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:75499581-75499567;PctSeqSimilarity=0.9543;PctSizeSimilarity=0.9085;PctRecOverlap=0.9453;SizeDiff=-30;StartDistance=2;EndDistance=14;GTMatch=0;TruScore=93;MatchId=1713.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:./.:19:9:6:11:./.:3:4:29:0:0/1:38:13:0/1:20:37:.:.:.
chr14	77259694	HG4_PB_SVrefine2Falcon1Dovetail_9099	A	AGGAGAGGAGAAAGAGGAGAGGGAAAGAGGAGAGGGGAGAGGAGGGAGAGGGGAGAGGAGGGGAGGGTAGGGGAGGGGAGGGGAGAGGAGGGGAGGGGAGGGGAGAGGAGGGGAGGGGAGGGGAGAGGAGGGGAGGGGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7418:HG3_PB_assemblyticsfalcon_8175:HG2_PB_pbsv_14959:HG3_PB_SVrefine2Falcon1Dovetail_9064:HG3_PB_HySA_22518:HG2_PB_PB10Xdip_10054:HG2_PB_PB10Xdip_10055:HG2_PB_SVrefine2PB10Xhap12_10808:HG2_PB_HySA_27231:HG2_PB_SVrefine2PB10Xhap12_10807:HG2_PB_SVrefine2Falcon1plusDovetail_3552:HG4_PB_SVrefine2Falcon1Dovetail_9099:HG4_PB_pbsv_14892:HG2_PB_SVrefine2PBcRplusDovetail_3302:HG4_PB_SVrefine2PBcRDovetail_7434;NumClusterSVs=15;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_9099;NumExactMatchSVs=1;ClusterMaxShiftDist=0.184502;ClusterMaxSizeDiff=0.184502;ClusterMaxEditDist=0.294964;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=140;DistBack=-129;DistForward=42;DistMin=-129;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=130;REFWIDENED=14:77259695-77259824;PctSeqSimilarity=0.9648;PctSizeSimilarity=0.9524;PctRecOverlap=0.7075;SizeDiff=-7;StartDistance=-40;EndDistance=-40;GTMatch=1;TruScore=87;MatchId=1715.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:39:1/1:1:23:1:18:./.:2:0:2:0:./.:2:1:./.:.:.:.:.:.
chr14	77333250	HG4_PB_SVrefine2Falcon1Dovetail_9100	T	TTGTGTGGGGTGTGTGTGTTGGGGGGGGTGGTAGGTGTGTGGGGTGTGTGTGTGTGTTGGGGAGGTGGGGTGTGTGTGTGGTAGTGTGGGGGTGTGTGTGTTGGGGGTGGGGTGTGTGTGTGCGTGTGGTAGTGTGTGTGTGGGGTGTGTGGGTGTGTTGGGGGTGGGGTGTGTGTGTGTGTGTGTTGGGGGTGGGTGTGTGTTGGGGGGTGGGGTGTGTGTGTGGGGGTGTGTGTTGGGGGGATGGGGTGTGTGTGGTAGTGTGGGGGGTGTGTGTGTTGGGGGTGGGGTGTGTGGTAGTGTGTGTGGGGGAGTGTGTGTGTTGGGGGGTGGGGTGTGTGTGTGTGTGGTAGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10809:HG2_PB_SVrefine2PBcRplusDovetail_3303:HG4_PB_SVrefine2Falcon1Dovetail_9100:HG3_PB_SVrefine2Falcon1Dovetail_9065:HG4_PB_SVrefine2PBcRDovetail_7435;NumClusterSVs=5;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_9100;NumExactMatchSVs=1;ClusterMaxShiftDist=0.109955;ClusterMaxSizeDiff=0.109955;ClusterMaxEditDist=0.136701;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=354;DistBack=67628;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=359;REFWIDENED=14:77333251-77333609;PctSeqSimilarity=0.927;PctSizeSimilarity=0.9833;PctRecOverlap=0.3712;SizeDiff=-6;StartDistance=-224;EndDistance=-224;GTMatch=0;TruScore=76;MatchId=1716.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:40:1|0:1:32:17:4:./.:2:96:2:23:./.:0:4:./.:2:16:.:.:.
chr14	80528746	HG4_Ill_GATKHCSBGrefine_10286	T	TTATATATATATACACACACATATATATGTGTGTGTGTGTATATATATATATGTCCCTGTTATATATATATATATATATTTATATATATATATAAATATATATATATATATATAAAACAGGGACA	20	PASS	ClusterIDs=HG4_Ill_manta_3507:HG4_PB_pbsv_14908:HG2_PB_PB10Xdip_10069:HG3_PB_assemblyticsfalcon_8209:HG3_PB_SVrefine2Falcon1Dovetail_9076:HG3_PB_HySA_22541:HG3_PB_pbsv_14620:HG4_PB_HySA_21815:HG2_PB_HySA_27265:HG2_PB_pbsv_14975:HG2_PB_SVrefine2Falcon1plusDovetail_3561:HG4_PB_SVrefine2Falcon1Dovetail_9115:HG3_Ill_GATKHCSBGrefine_9828:HG4_PB_SVrefine2PBcRDovetail_7444:HG4_Ill_GATKHCSBGrefine_10286:HG2_PB_SVrefine2PBcRplusDovetail_3312:HG2_PB_SVrefine2PB10Xhap12_10820:HG2_PB_SVrefine2Falcon2Bionano_7429:HG2_Ill_manta_4111:HG2_Ill_GATKHC_23833:HG2_Ill_GATKHCSBGrefine_9942;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9942:HG2_Ill_GATKHC_23833:HG2_Ill_manta_4111:HG2_PB_SVrefine2Falcon2Bionano_7429:HG2_PB_SVrefine2PB10Xhap12_10820:HG2_PB_SVrefine2PBcRplusDovetail_3312:HG4_Ill_GATKHCSBGrefine_10286:HG4_PB_SVrefine2PBcRDovetail_7444;NumExactMatchSVs=8;ClusterMaxShiftDist=0.220339;ClusterMaxSizeDiff=0.220339;ClusterMaxEditDist=0.27234;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=124;DistBack=23666;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=62;REFWIDENED=14:80528747-80528808;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:6:61:1/1:1:5:1:8:./.:1:7:0:3:0/1:13:15:./.:.:.:.:.:.
chr14	80954553	HG4_Ill_SVrefine2DISCOVARDovetail_10571	C	CAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACACAAATAAACTCGAAAATCTAGAAGAAATGGATAAATTGCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAAATGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCAACCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATCGATGCAAAAATCCTCAATAAAACACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACACAAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAACATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGACGGGACATATCTCAAAATAAGAAGAGCTATCTATGACAAACCCACAGCCAATATCGTACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCATTCCTGTTTAACATAGTGTTAGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACGTGATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGCCAAATCAAGAGGGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGAATACAAACAAATGCAAGAACATTCCATGCTCATGGGTAGGAAGAATCAACATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAATCAAAAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACTGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACCATCTAATCTTTGACAAACCTGACAAACACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTCAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTGAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGTCAAGGACTTCATGACTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTATAAAATGGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10070:HG4_PB_pbsv_14909:HG2_PB_assemblyticsfalcon_8226:HG2_PB_pbsv_14976:HG3_PB_assemblyticsfalcon_8211:HG4_PB_assemblyticsfalcon_8105:HG3_PB_pbsv_14621:HG2_PB_SVrefine2Falcon2Bionano_7430:HG2_10X_SVrefine210Xhap12_10375:HG2_PB_SVrefine2PB10Xhap12_10821:HG2_PB_SVrefine2Falcon1plusDovetail_3562:HG4_PB_SVrefine2PBcRDovetail_7445:HG4_Ill_SVrefine2DISCOVARDovetail_10571:HG2_PB_SVrefine2PBcRplusDovetail_3313:HG4_PB_SVrefine2Falcon1Dovetail_9116:HG2_PB_HySA_27269:HG2_PB_PB10Xdip_10071;NumClusterSVs=17;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_10571:HG4_PB_SVrefine2PBcRDovetail_7445;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0576773;ClusterMaxSizeDiff=0.0576773;ClusterMaxEditDist=0.195222;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1891;DistBack=20650;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=14:80954554-80954558;PctSeqSimilarity=0.9976;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1721.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:62:1/1:0:38:0:32:./.:0:0:0:0:1/1:0:14:1/1:17:392:.:.:.
chr14	81144408	HG3_Ill_GATKHC_23687	G	GTATATATATATATATATACGTATATATATATATATGTATATATATATATATATATATGTATATATATATATATATATGTATATATATATA	20	PASS	ClusterIDs=HG3_PB_pbsv_14622:HG3_Ill_SVrefine2DISCOVARDovetail_10717:HG3_Ill_Spiral_15494:HG3_Ill_GATKHC_23687:HG3_Ill_GATKHCSBGrefine_9830:HG2_Ill_GATKHC_23839:HG2_Ill_GATKHCSBGrefine_9944:HG2_PB_pbsv_14977:HG3_Ill_manta_3362:HG3_Ill_150bpfermikitraw_18812:HG2_Ill_150bpfermikitraw_18797;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9944:HG2_Ill_GATKHC_23839:HG3_Ill_GATKHCSBGrefine_9830:HG3_Ill_GATKHC_23687:HG3_Ill_Spiral_15494;NumExactMatchSVs=5;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.203209;PBcalls=2;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=90;DistBack=-1;DistForward=99146;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=14:81144397-81144421;PctSeqSimilarity=0.9762;PctSizeSimilarity=0.9574;PctRecOverlap=0.8526;SizeDiff=-4;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=92;MatchId=1722.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:34:0|1:39:1:2:32:./.:2:7:2:8:0/1:12:14:./.:.:.:.:.:.
chr14	81786773	HG2_Ill_breakscan11_4576	G	GACCTTTTTTTTTTTTAATTTATTTATTTATTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGTAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCAGGTCTACTTCTATCCACACAGACCTGGCAACCATCCGATTTCTCAATTTTTTCCCCACTCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCAGGCAGAGGGGCTCCTCATTTCCCAGTAGGGGTGGCCGGGCAGAAGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGTCCCTCACCTCCCGGACAGGGCGCGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGACCCCCCCCCGCCCCGCCTCCCTCCCGGACGGGGCGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCTCACCTCCCTCCCGGGCGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGCTGATCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGAGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCACCACCTCCCTCCCGGACTGGGCGGCTGACCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGTCGGGGTGGCTGCCGGGGAGACGCTCCTCACTTCCCAGACGGGTGGCTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACAGGGTTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCAGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTCCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGAGGCTCCTCATATCCCAGACGATGGGGGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCTGGGCAGAGGCTGCAATCTCGGCACTTTGGGGGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACAAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCCGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCGTGGAAGGAGACCGTGGGAAGGGGGAGAGGGGAGAGGGGGAGGGGAGAGGGGAGATACCATAAAGTCTTTTATCCCTAACAAATGTTTTTTGAATACCTTCCACATGCATGTTCCCAGGACAGACTTATACAGGCCAGGTGTGGTGGCTCACGCCCTTGTAATCCCAGCACTGTAGGAGGCCAAGGTGGGGACATTGTTTGAGCCTGGGAGTTCAAGACCAGCCTGGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9119:HG3_PB_HySA_22551:HG2_PB_pbsv_14981:HG2_PB_PB10Xdip_10075:HG2_PB_assemblyticsPBcR_7930:HG2_PB_assemblyticsfalcon_8232:HG3_PB_assemblyticsfalcon_8217:HG2_PB_HySA_27278:HG3_PB_pbsv_14625:HG4_PB_assemblyticsfalcon_8112:HG2_Ill_breakscan11_4576:HG2_PB_SVrefine2Falcon1plusDovetail_3563:HG3_PB_SVrefine2Falcon1Dovetail_9079;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_breakscan11_4576;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0541935;ClusterMaxSizeDiff=0.0541935;ClusterMaxEditDist=0.220737;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=2682;DistBack=4910;DistForward=18664;DistMin=4910;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=14:81786774-81786782;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.9904;PctRecOverlap=0.9904;SizeDiff=-26;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1723.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:65:./.:27:14:1:32:0|1:33:1:0:10:0/1:32:19:0/1:82:217:.:2670:.
chr14	81924161	HG4_PB_SVrefine2Falcon1Dovetail_9120	A	ATATATTATATATAATTTATATATAATATATGTTATATTATATATAATTTATATATAATATATGTTATATTATATATAATTTATATATAATATATGTTATATTATATATAATTTATATATAATATATGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3564:HG2_PB_PB10Xdip_10076:HG2_PB_SVrefine2PB10Xhap12_10825:HG4_PB_SVrefine2PBcRDovetail_7447:HG2_PB_pbsv_14982:HG4_PB_SVrefine2Falcon1Dovetail_9120:HG4_PB_pbsv_14911:HG2_PB_SVrefine2Falcon2Bionano_7432;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3564:HG4_PB_SVrefine2PBcRDovetail_7447:HG4_PB_SVrefine2Falcon1Dovetail_9120:HG2_PB_SVrefine2Falcon2Bionano_7432;NumExactMatchSVs=4;ClusterMaxShiftDist=0.165289;ClusterMaxSizeDiff=0.165289;ClusterMaxEditDist=0.298755;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=128;DistBack=47538;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=525;REFWIDENED=14:81924162-81924686;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1724.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:42:1/1:1:19:0:8:./.:0:0:0:0:0/0:10:0:./.:.:.:.:.:.
chr14	83587174	HG2_10X_SVrefine210Xhap12_10382	A	ATCTGTTGCCTCTCATACACACCTGGAATTCCTCATCTCCCTTGTTCTCCTATAGCTTTTATTTTCCCCTCCTCCTCCCCCTTCTTCTCCTCTTCCTCCTTCTTTTTTAAATAGCAGTGACTCCTTCTAACATACTACAAAATTTATTTATTTATCATGTTTGATTCATCTGACATTCCCAAGTTGAATGTTAATTCCCCAAAATAAGAGACTTTTGCATGTTTTCTCCCCTAATGCATTTAAAGCCCTTAGAATATGTCTGATACATAATAAGTCCTAATACAAATTTGTTTAACAACTTAATAATAATAGGCTATATGTTATGGAAACAGCTTCATATCACTGTATCAAGCACATTTCATAGATTGACTTCACAGTTCTTGCTGTAACTGAAGTGGGAGCTATTTTTCTCGCCAGTTTACCAATTAGAAAACCAACGTATGAAGAGCTTAAGTAAATTGTCAAATACCTGTCAAGTGGCAGAGCAAGATTTGGATCTAGAAATCTGACTCCAGAGTTTGTATTCTCAAACTTGTGAAACATTTTTATATTAAATAAAACTTTAGTTGTCAAATATATTTTTTTAAAACGCAGTCATACATTGCTTAACTATGGAAATACATTGTTACATGTATGTACATATATGCATTCTGCCATTGACCAAAATATCTTTATACATTGCATGGTTGTAATAGTGATTTTTTTAAGTCATGGAAAAAACAACTTTTAAAAAGTTATTCCATAAAGTAGAATAAAAAGTAAGGGACATAAAATATGAGCAAATATTATGATATAAAAAGATAAATCTAGGCTTCATTAGCCAGTTAGTAACATTTATTAGAAGAAAACATCCAGAAATCAGAAAGAAGGCCATAAGGAAAAATACTATGGAGTAAAATTTTCAAGAGCAGAGGTGCTTATATATTTTTTGAGTTTCTAACAAAATAAAAAAAAAAATGGCCTGGCGCGGTGGCTTACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAAGTCAGGAGATTGAGACCATCCTGGTCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGCAGCGTGCGGCTGTAGTCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATTGTTTGAACCCGGGAGGTGGAGGCTGCAGTGAGCCGAGATGGCACCACTGCACTCCAGCCTGGACAACAGAGCGCGAGACTCTGTCTCAAAAAAAAAAGAAAAAAAAATTTCTACACTTAAATATATCATTGAACTATTTCTGATCCCAAAGTATAAAAAAAAGTTTTTGAGGAGAGAGCAATGTTCAAAGGCACAGGAATTAGACCAGTGTCACACGTAGTTACTGAGAGTTGCTCTATTGATTCCGGCAGCCAAAGTTTGAGGACAACATATTTTCACTTGGAATTCTGCATCAAGCAAAATTATGAACTTCAATATGAAGGCACAATAAAGATATCTTCAAAGTCAGAAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9127:HG3_PB_pbsv_14632:HG2_PB_PB10Xdip_10084:HG2_Ill_breakscan11_4577:HG4_PB_pbsv_14920:HG2_PB_SVrefine2PB10Xhap12_10832:HG2_PB_SVrefine2PBcRplusDovetail_3321:HG3_PB_SVrefine2Falcon1Dovetail_9086:HG2_10X_SVrefine210Xhap12_10382:HG3_Ill_SVrefine2DISCOVARDovetail_10727;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10382;NumExactMatchSVs=1;ClusterMaxShiftDist=0.10143;ClusterMaxSizeDiff=0.10143;ClusterMaxEditDist=0.222082;PBcalls=7;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=1504;DistBack=6471;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=14:83587175-83587177;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1725.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:34:0|1:35:6:1:37:0|1:36:0:0:17:0/1:29:14:0/1:58:107:.:1426:.
chr14	84632721	HG2_Ill_manta_4118	A	AAAAATAATTTAAAAAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3573:HG2_PB_pbsv_14991:HG4_PB_SVrefine2Falcon1Dovetail_9130:HG3_PB_assemblyticsfalcon_8246:HG4_PB_assemblyticsfalcon_8135:HG3_PB_pbsv_14637:HG2_PB_assemblyticsfalcon_8258:HG2_Ill_breakscan11_4578:HG3_PB_SVrefine2Falcon1Dovetail_9089:HG3_PB_HySA_22579:HG3_Ill_MetaSV_1635:HG3_Ill_GATKHCSBGrefine_9849:HG3_Ill_manta_3365:HG2_Ill_manta_4118:HG2_Ill_GATKHCSBGrefine_9963;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9963:HG2_Ill_manta_4118:HG3_Ill_manta_3365;NumExactMatchSVs=3;ClusterMaxShiftDist=0.131195;ClusterMaxSizeDiff=0.131195;ClusterMaxEditDist=0.239067;PBcalls=9;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=356;DistBack=15241;DistForward=25963;DistMin=15241;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=14:84632722-84632740;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1726.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:29:./.:13:25:21:9:0|1:22:0:0:5:0/1:24:21:0/1:7:27:.:.:.
chr14	86082065	HG2_PB_SVrefine2Falcon1plusDovetail_3578	T	TATTTATAACCTATAGTTACGACTGTGGAAATGTGCATAAAATCTATAAATTGCTTTAGTGTTTCCAGATTTGTAGTGTAGTTAGGCCTGTGGATTATGTACCTACCTGTGTCTGATTTTTGGCATGAACTGCTTAACTCCAGAAGCTATAAGTCAGATATGACCCTGGGAAAATTTTCTA	20	PASS	ClusterIDs=HG3_PB_pbsv_14644:HG2_PB_pbsv_14997:HG4_PB_SVrefine2PBcRDovetail_7458:HG4_PB_SVrefine2Falcon1Dovetail_9133:HG4_Ill_svaba_18640:HG4_Ill_manta_3513:HG4_Ill_SVrefine2DISCOVARDovetail_10592:HG4_Ill_MetaSV_1584:HG4_Ill_GATKHCSBGrefine_10311:HG4_Ill_Cortex_1101:HG3_PB_SVrefine2Falcon1Dovetail_9093:HG3_Ill_svaba_18797:HG3_Ill_manta_3369:HG3_Ill_Spiral_15522:HG3_Ill_SVrefine2DISCOVARDovetail_10739:HG3_Ill_MetaSV_1638:HG3_Ill_GATKHCSBGrefine_9853:HG3_Ill_Cortex_1148:HG3_Ill_250bpfermikitraw_19375:HG3_Ill_150bpfermikitraw_18849:HG2_PB_SVrefine2PBcRplusDovetail_3328:HG2_PB_SVrefine2PB10Xhap12_10840:HG2_PB_SVrefine2Falcon2Bionano_7443:HG2_PB_SVrefine2Falcon1plusDovetail_3578:HG2_Ill_svaba_18642:HG2_Ill_SpiralSDKrefine_5160:HG2_Ill_SVrefine2DISCOVARplusDovetail_3978:HG2_Ill_MetaSV_1514:HG2_Ill_GATKHCSBGrefine_9967:HG2_Ill_Cortex_2688:HG2_Ill_250bpfermikitraw_19965:HG2_Ill_150bpfermikitraw_18831:HG2_10X_SVrefine210Xhap12_10391:HG2_PB_PB10Xdip_10094:HG2_PB_PB10Xdip_10093:HG2_Ill_breakscan11_4580:HG4_PB_assemblyticsfalcon_8138:HG3_PB_assemblyticsfalcon_8250:HG2_PB_assemblyticsfalcon_8268:HG4_PB_pbsv_14928;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10391:HG2_Ill_150bpfermikitraw_18831:HG2_Ill_250bpfermikitraw_19965:HG2_Ill_Cortex_2688:HG2_Ill_GATKHCSBGrefine_9967:HG2_Ill_MetaSV_1514:HG2_Ill_SVrefine2DISCOVARplusDovetail_3978:HG2_Ill_SpiralSDKrefine_5160:HG2_Ill_svaba_18642:HG2_PB_SVrefine2Falcon1plusDovetail_3578:HG2_PB_SVrefine2Falcon2Bionano_7443:HG2_PB_SVrefine2PB10Xhap12_10840:HG2_PB_SVrefine2PBcRplusDovetail_3328:HG3_Ill_150bpfermikitraw_18849:HG3_Ill_250bpfermikitraw_19375:HG3_Ill_Cortex_1148:HG3_Ill_GATKHCSBGrefine_9853:HG3_Ill_MetaSV_1638:HG3_Ill_SVrefine2DISCOVARDovetail_10739:HG3_Ill_Spiral_15522:HG3_Ill_manta_3369:HG3_Ill_svaba_18797:HG3_PB_SVrefine2Falcon1Dovetail_9093:HG4_Ill_Cortex_1101:HG4_Ill_GATKHCSBGrefine_10311:HG4_Ill_MetaSV_1584:HG4_Ill_SVrefine2DISCOVARDovetail_10592:HG4_Ill_manta_3513:HG4_Ill_svaba_18640:HG4_PB_SVrefine2Falcon1Dovetail_9133:HG4_PB_SVrefine2PBcRDovetail_7458;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0434783;ClusterMaxEditDist=0.13941;PBcalls=15;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=180;DistBack=-1;DistForward=15390;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=14:86082066-86082066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1727.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:./.:0:4:0:15:1/1:0:29:0:14:1/1:0:33:./.:.:.:.:.:.
chr14	88776499	HG2_PB_SVrefine2Falcon1plusDovetail_3587	C	CTCATATACCATATCATATGGTATATGATATACCATATCATATGGTATATGATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATATCATATACCATATCATATGGTATA	10	PASS	ClusterIDs=HG2_PB_pbsv_15013:HG3_PB_pbsv_14662:HG4_PB_SVrefine2Falcon1Dovetail_9142:HG2_PB_SVrefine2Falcon2Bionano_7452:HG2_PB_SVrefine2Falcon1plusDovetail_3587:HG3_PB_SVrefine2Falcon1Dovetail_9104:HG3_PB_HySA_22621;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3587:HG2_PB_SVrefine2Falcon2Bionano_7452:HG4_PB_SVrefine2Falcon1Dovetail_9142;NumExactMatchSVs=3;ClusterMaxShiftDist=0.127778;ClusterMaxSizeDiff=0.127778;ClusterMaxEditDist=0.177778;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=360;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=85;REFWIDENED=14:88776500-88776584;PctSeqSimilarity=0.9976;PctSizeSimilarity=1;PctRecOverlap=0.8615;SizeDiff=0;StartDistance=-50;EndDistance=-50;GTMatch=0;TruScore=95;MatchId=1729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:0:0:0|1:30:7:4:22:./.:0:2:6:3:1/1:0:10:0/1:3:11:.:.:.
chr14	89150580	HG2_PB_PB10Xdip_10108	A	TAAATTTAACAAAATGAGTGCAAGATCTGTACACTGAAAACTACAAAACACTCAGAAAAAGTTAAAAGAAGATCTAATTAAATAGGGAGCTATCCCATGTTCATGGACTGAAAGACTTAATGTGTAGGATGGCACTACTCCCCAAACTGATCATGGAATAGTGCTGCTACAAACATTGTACAGTTTTTGTTGTTGTTGTTGTTGTTAATATATGTAAACATTTCTGCAGGGTATACACATTCCTATACTTGTAATTACTATCATTTTATAATATTTTTATTTCTAGCATGGAGAGTTTCTCAAAGCTTTCTTGACTATTCTTGAATATTTTTTCTTCTATATGGTTTTTAATATCTTTCCAGAATTTGTGAAAAATCTAATTAAAATTTTGATTGTGATTAAATTTATATAACTTATTTCTTTTATTCTTTAGTAAAATCTTACAGTTTTCTTAACACAGGTTGTGCATATTTTTAGCTATATTTATTCCCAGTTATTATATTTTTTGTGTATCTTTTTTTTTTTTTTAAAGAAATGAGATCTCCCTCTGTCACCCAGGTTGCCATGCAGTGGTGCAATCATAGTTTACTGCACCCTTGAACTCCTGGGCTCAAGTGATCCTCCTACATTAGCCTCCTGAGTAGCTGGGACTACACATGTGTGCAAGAAAACCCAGCTAATTTTATTTAGAGGTGTGGGGGCGGGGGGCTCACTATGTTGCCCAGGCTGATCTTGAACCCTCAGCTTCAAGTGATTGTCCCACCTCAGCCTCTTGAGTAGCTGGGATTATAGGCATGAGCAACTGCACCTGGTGCAAGTAGCATTTTATTTATTTATTTATTGAGAGGGAATCTTGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCAATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTTCAACCAATTCTCCTGCCTCTGTCCCCTGAGTAGCTGGGATTACAGGTGCCTGCCACCATGTCCCACTAATTTTTGTATTTTTAGTAGAGATGGAGTTTCACCACATTGGCCAGGACGGTCTCGAACTCCTGACCTCGTGATCTGCCTGCCCAAGCCTCCCAAAGTGCTGGGATTAGAGGTGTGAGCCACTGCACCCGTCCGGCAAGTAGCATTTTTAATATCATATTTTCTAACTAGTTATTGCTAGTATATAGAAACACTATTGATTTTTATAAGTGGATTTTGCATCTAATCACTTTACAGAACTCTTTAATTAGTTCTAATAATTTTTCAGTTTATTCCCTTGATATTCAAGGTATAGGGCTATAATATCCAGAAATACCAACACTGTTGTCCATTCCTTTCCAACACATACATCTTAATTATTGTTTTGTTTTACTAGATTGGCTAAGACCTCACACAAAATGTTGGACAGTAATGGTGTGATCTGGTATCCTTGTCTTGCTTGCGATCTCAAGAAGATAATAAGACATTTGAAATCTTGAACTCTACAATAAATACTAAAAACAATGGGACATTTTAAAAATTTTTAACTGGGAGGCCAAAGCTTTGGCACTTTAAGTTCCTATGTAAGCAAACCAAAGCCCAATGTAAACAGTGAAACGAAACTAGAGACTATGCCAATCAGAATCTGCAACTAATCTCTAAGTAAGGTCTTTCCACTCTAACCAATTAAATATATTTTCTTTGTCTTACTTCTGCACTCAGCCTATAAAATCTCACTGCCCACACTGCTACAGCAGATCTCTCTGAGCCTTTTCCAGTGCTGAGTGCTGCCTAATTCATGTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTCTGAGACAAGGTTTCGCTATGTTGCTCATACTGGGCTCAAGCAATCTGCCCACCTCAGCTTCCCAAACTCCTGGGCTCACGTGATCTGCCTGCCTCAGTCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCGGCCCTCTTTTAATGTGCAGGTAAACTCTGTTAAATTTATTTTGTCTAGAGTTTTTCTCTTAACAGACATTATTTGTGACTTCTAAATCTTTTTTCCAGTTAAGAAACTGTGTTTTTAATAATGTCATATTTGGATTCATCTGTAAAAGCATACTTGTGTTAATATTTTCCAAGACATCACAAACATGTTAAACACCATGACCCCATCATCTTTTTACTTCAAAGACATATTATGTAAGTGAAATTAAACAGTAAGACACCAGTTAATTTAGTATATAACATTTTGTCATCCATTTACAAATTTTCCTTGATCCATCAAAATGTTATTTTAACATTAAAGCACGTTCTCCTCTATGTGTGCTCATTGGTGTCATAACAGTGAAGTGGGGGTTGCAGGAGAAATAAGTCTGTATTAAGAAAATTCTTTTTCAGGGTAAAAAGGCAAGCCAAAGTTTGGTGTTACTATATAGAGTTGCACAAGGACAGTTTTTGGTCAGGATATATCCTGTTTCATTTACTGTTTTATGGTGTTATTTCCCTATTTTCCAGAAAAATATAATACACAGAAGAAATATAAATCTAAAAATCGAATCCACCATTCCTGATGGAAATGTTAAGGATCATATAACCAGCACCTAATCCTGCTATTTAATTTTACATCTCTATCACATAATTTTTGTATTTCTGGATTTTTGTTTTATTATTATTATTATTATTTTTTTTTTTTTTTATTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9108:HG4_PB_pbsv_14947:HG2_PB_pbsv_15015:HG3_PB_pbsv_14664:HG2_PB_PB10Xdip_10109:HG2_PB_PB10Xdip_10108:HG4_PB_SVrefine2PBcRDovetail_7464:HG2_10X_SVrefine210Xhap12_10405:HG4_Ill_SVrefine2DISCOVARDovetail_10604:HG4_PB_HySA_21897:HG2_PB_SVrefine2Falcon1plusDovetail_3589:HG2_PB_SVrefine2PBcRplusDovetail_3339:HG2_PB_SVrefine2PB10Xhap12_10852:HG2_PB_SVrefine2Falcon2Bionano_7454:HG4_PB_SVrefine2Falcon1Dovetail_9145;NumClusterSVs=15;ExactMatchIDs=HG2_PB_PB10Xdip_10108:HG2_PB_PB10Xdip_10109;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0521395;ClusterMaxSizeDiff=0.0517799;ClusterMaxEditDist=0.196664;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=2724;DistBack=0;DistForward=27139;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:89150581-89150579;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9985;PctRecOverlap=0.9985;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1730.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:0:0:1/1:0:31:0:33:1/1:0:8:0:6:1/1:0:24:1/1:9:436:.:4038:.
chr14	89177720	HG2_PB_SVrefine2Falcon1plusDovetail_3590	G	GCAGTTCCCTCCATTGTTCCCACTCTCTCTCCTGCTGCCGTTTAAGTTGTGCCTTGCTTCCCCTTCACCTTCTGCCATGACTGTAAGTTACCTGAGGCCTCCCCAGCCATGAGGAACTGTGAGTCAATTAAACCTCATTTTTAGAAATAAATTACCAGTGTCAGGAAGTTCTTTATAGCAGTGTGAAAACAGACTAACACACCTTTATTAACATACTTAGTGAAATATCTTCACATGTACCTAGGAAGCTGACATCTCACAGGCAGGAATCAATAACATGGCAAGCCAGCAAGATCTTTTTTTTTTTTTTTTTTTTTTGAGACGTAGTCTCGCTCTGTCCCCCAGGCTGGAGTGCAGCAGTGCGATCTCGGCTCACTGCAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACCCGCCACCATGCCCAGCTAAATTTTTTTCTATTTTTTAGTAGAGACAGGGTTTCAGTGTTAGCCAGGATGGTCTCGATCTTCTGACCTTGTGATCCACTGCCTCAGCCTCCTAAAGTGCTGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAGCTGGCAAGATCTTAAACTCATCACTTTACCTTAGAGGCACAACAGAAATACCAGCCTGGGCTTCTGGAAAAATTGAGCCCTTAAGTTTGACATCAGCAGATTATATATTTGAATCAAACTATTTTAGCTGTTTCCAAAAATCACCTTTACTAAGCTACATTTTTAATGTTTGCCCAACACCTTGTATCAACAAGCCAGGTGAAAATCACTACTGCATCTGTTACAGGTGTTGATGCTCTAGGAATACACATTCACTACATCTAACATAAAGTCCCATACCTCAGGAAAGTTCCTTGAAAATTTTCCAAAGAAACTTTGATTTGCTAGAGGAGTAAGTTGCTTTTTTTTTTAATGTACAATGAAAACTATTTTGTGCACTGCTTTATTTTTGGTTTCCACGAAGCTCAGAATCAAATTTGATGTTTGACTACTGTCATTTTCTTTATCTAGTTTGAATATGGTATTTCTATTTATATTTCCCCTGATACTGATTCTCTATTTGTATAGTTACTTTAGTACTTACGGACTTGTTATGAGCTGACTCAAATACTTTATGAAATAGGCATGGAATAAATAAATGATACCTAACATTTTATTTAATTATCCCAGATCTATGAACAGAATGATTCATCATTTTAGAAGAGATCCAAGAAAAAGAGGTGATATATAAAATACATAGAAAATAACCAAATGATAAGACTATGTATTAGTCCATTTTCAAACTGCTATAAAGAACTGCCCAAGGCTGAGTAATTTATAAAGGAAAGAGATTTAATTGACTCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3590:HG3_PB_pbsv_14665:HG4_PB_SVrefine2Falcon1Dovetail_9146:HG2_10X_SVrefine210Xhap12_10406;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3590;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0561601;ClusterMaxSizeDiff=0.0554581;ClusterMaxEditDist=0.115128;PBcalls=3;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=1384;DistBack=27139;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=14:89177721-89177726;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.995;PctRecOverlap=0.9957;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1731.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:0:0:./.:11:14:10:9:1|0:0:11:44:0:0/1:27:27:0/1:51:117:.:4038:.
chr14	90074542	HG4_Ill_SVrefine2DISCOVARDovetail_10610	C	CTGTTAGCCAGGATGGTCTCGATCTCCCGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCAGCCAACACCCAGATAATTTTTGTATTTTTAGTACAGACAGGGTTTCACCA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3997:HG3_PB_pbsv_14670:HG2_PB_PB10Xdip_10116:HG4_PB_pbsv_14952:HG3_PB_HySA_22635:HG2_PB_HySA_27378:HG3_PB_SVrefine2Falcon1Dovetail_9113:HG4_PB_SVrefine2PBcRDovetail_7467:HG4_PB_SVrefine2Falcon1Dovetail_9152:HG4_Ill_SVrefine2DISCOVARDovetail_10610:HG3_Ill_SVrefine2DISCOVARDovetail_10762:HG2_PB_SVrefine2PBcRplusDovetail_3344:HG2_PB_SVrefine2PB10Xhap12_10860:HG2_PB_SVrefine2Falcon2Bionano_7458:HG2_PB_SVrefine2Falcon1plusDovetail_3593;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3997:HG4_PB_SVrefine2PBcRDovetail_7467:HG4_PB_SVrefine2Falcon1Dovetail_9152:HG4_Ill_SVrefine2DISCOVARDovetail_10610:HG3_Ill_SVrefine2DISCOVARDovetail_10762:HG2_PB_SVrefine2PBcRplusDovetail_3344:HG2_PB_SVrefine2PB10Xhap12_10860:HG2_PB_SVrefine2Falcon2Bionano_7458:HG2_PB_SVrefine2Falcon1plusDovetail_3593;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0735786;ClusterMaxEditDist=0.265781;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=144;DistBack=21081;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=241;REFWIDENED=14:90074543-90074783;PctSeqSimilarity=0.9967;PctSizeSimilarity=1;PctRecOverlap=0.9655;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=98;MatchId=1732.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:1:26:0:14:./.:1:2:1:6:0/1:8:11:./.:.:.:.:.:.
chr14	90767212	HG2_PB_SVrefine2PB10Xhap12_10863	A	AGGAGGGGAGGGGGAGGAGGGGAGGGGGGGGAGGAGGGGAGGAGGGGAGGGGGAGGGGAGGGGGAGGGGAGGGGAGGGGAGGGGAGGGGGAGGAGGGGGGAGGGGGGAGGGGTGGGGAGGGGGAGGGGAGGGGAGGGAGGGGAAGGGAGGGGATGGGGGAGGGAGAAGGGAGGGGAGGGGGAGGGGGGGGAGGGGAGGGGAGGGGGGAGGGGGAGGGGGGGGGGGGGGAGGGGAGGGGGGGGGGGGGGGAGGGGAGGGGGGGGAGGGGGGAGGGGGAGGGGGAGGGGAGGGGGAGGGGGAAGGGAGAAGGGGGAGGGGAAGGGAGGGGAAGGGGAGGAAGGGGGAGGGGAGGAGGAAGGGGGAGGGGGAGGGGGAGGGGAAAGGAGGAGGAAGGGGGAGGGGGAAGGGGAGGGAGGGGAGGAGGGGGAAGGGAGGGGAGGAGGGGGAAGGGAGGGGAGGGGAGGAGGGGGAGGGAGAGGGGAGGGGAGGAAGAAGGGGAAGGG	10	PASS	ClusterIDs=HG3_PB_pbsv_14674:HG2_PB_SVrefine2Falcon2Bionano_7461:HG4_PB_pbsv_14956:HG2_PB_SVrefine2PB10Xhap12_10863:HG2_PB_pbsv_15023:HG2_PB_HySA_27384:HG2_PB_SVrefine2PBcRplusDovetail_3347:HG3_PB_assemblyticsfalcon_8301:HG3_PB_SVrefine2Falcon1Dovetail_9116:HG2_PB_SVrefine2Falcon1plusDovetail_3595:HG4_PB_SVrefine2PBcRDovetail_7470:HG4_PB_SVrefine2Falcon1Dovetail_9154;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10863;NumExactMatchSVs=1;ClusterMaxShiftDist=0.323749;ClusterMaxSizeDiff=0.321619;ClusterMaxEditDist=0.348862;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=502;DistBack=-42;DistForward=-1;DistMin=-42;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=29;REFWIDENED=14:90767213-90767241;PctSeqSimilarity=0.9359;PctSizeSimilarity=0.9163;PctRecOverlap=0.9165;SizeDiff=42;StartDistance=-17;EndDistance=-17;GTMatch=1;TruScore=92;MatchId=1735.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:1:23:1:19:./.:0:3:1:7:0/1:3:8:0/1:4:12:.:.:.
chr14	90962739	HG2_PB_SVrefine2PB10Xhap12_10864	T	TCTCTCCTCCCCTCCCCTCCCCTCCCCTCCCCCTCCTCTCCTCCCCTCCCCTCCCCTCCCCTCTCCTCCCTCTCCTCCCCTCCCCTCTCCTCCCCACCCCTCCCCTCCCCTCTCCTCCCCACCCCTCTCCTCCCCTCCCCTCTCCTCCCCTCCCCTCCCCTCCCCTCTCCCCCCTCTCCTCCCCTCTCCTCCCCTCCCCTCTCTTCCCCCCTCCTCCCCTCTCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCTCCCCTCCCCTCCCCTCTCCTCCCCTCCCCTCCCCTCTCCTCCCCTCCCCTCCCCTCCCTCCCCTCTCCCTCCCCTCTCCTCCCCTCCCCTCTCCTCTCCTCCCCTCCCCTCTCCTCCCCTCCCCTCCCCTCCCCTCCCCTCTC	10	PASS	ClusterIDs=HG2_PB_pbsv_15024:HG2_PB_HySA_27386:HG2_PB_PB10Xdip_10121:HG2_PB_SVrefine2Falcon2Bionano_7462:HG4_PB_SVrefine2Falcon1Dovetail_9155:HG2_PB_SVrefine2Falcon1plusDovetail_3596:HG2_PB_SVrefine2PBcRplusDovetail_3348:HG3_PB_SVrefine2Falcon1Dovetail_9117:HG2_PB_SVrefine2PB10Xhap12_10864:HG4_PB_SVrefine2PBcRDovetail_7471:HG3_PB_pbsv_14675;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10864;NumExactMatchSVs=1;ClusterMaxShiftDist=0.105781;ClusterMaxSizeDiff=0.105781;ClusterMaxEditDist=0.231631;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=406;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=82;REFWIDENED=14:90962740-90962821;PctSeqSimilarity=0.9861;PctSizeSimilarity=0.9736;PctRecOverlap=0.9424;SizeDiff=-11;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=96;MatchId=1736.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:32:./.:1:11:0:3:./.:0:0:0:0:./.:1:3:./.:1:10:.:.:.
chr14	91263634	HG3_PB_SVrefine2Falcon1Dovetail_9119	T	CTAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTTGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9119:HG4_Ill_MetaSV_1590:HG4_PB_SVrefine2PBcRDovetail_7472:HG2_PB_pbsv_15027:HG4_PB_HySA_21908:HG3_PB_HySA_22643:HG2_PB_HySA_27388:HG3_PB_pbsv_14678:HG4_PB_SVrefine2Falcon1Dovetail_9156;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9119:HG4_PB_SVrefine2Falcon1Dovetail_9156;NumExactMatchSVs=2;ClusterMaxShiftDist=0.172702;ClusterMaxSizeDiff=0.172702;ClusterMaxEditDist=0.211699;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=174;DistBack=-176;DistForward=3;DistMin=-176;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:91263635-91263633;PctSeqSimilarity=0.983;PctSizeSimilarity=0.9886;PctRecOverlap=0.9887;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1738.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:19:0|1:25:1:0:16:./.:23:1:1:2:0/0:23:1:./.:.:.:.:.:.
chr14	92101081	HG3_PB_SVrefine2Falcon1Dovetail_9122	AAGCTGCAAAAA	CTTGGATGGAACTGAAGGCCATTACCCTCAGTGAAGTGACTTAGGAACAGAAAAACCAAACACTGCATGTTCTCACTTAAAAGTAGGAGCTAAGCTATGGGTATGCAAAGGCATACAGAGTGGCCTGTATGATATTGGAGGCTCAGAAGAAGGGAGGGTGGGAGGGGTGAGAGAGGAAAAACTGCCTATTGGGTACAATGTACACTACTTGGGTGATAGGTACACCAAAAATCCAGACTTCACCACTACACAATTCACCCATGTAACCAAAATTCACTTGTACCCTTAAAGCTATTGAAACTTAAAAAAAAAATTAAAAATTTACCTCTACTCCAAAACCCAAGATAATATGTAGAAAAAGTACTAGAATTAAAAGAATTTAGCAAATTTGAAAAATATAAGATTACTCTACAAAAGGCAATCATAAGACTTCTGCTTTTGCTTTAAATGCAGAAAGATGCACTCAAACAAGAAAACAAAACAAAAAGTAGATAAAGTACAAAGTCATGACTTTTCTCTAGTTTGTCAGAGAACTAAGGTCACTAGATAACCAACTAAGCTGAAATCCAGAGCAATAAGCCATTCAAGGAGAGATTGAACACTAGGACAGTGTCACCTATGGAAGAACATGGGAAGGAGAAACAGTGCTGACCACAACACAAGCAAGTAAGAGTTAGCTGAAGTTGTTAAAAAGGGCCAAAGGCCAGGTATGTGCTAGCATGTGAGTCTGGAAGTACTTGGGCGCCTGACAAATGGGAGTCTGCACTCACTTGCAAACTCCACTGGCTTCCATTGAAGGCTCGTGGCAAAGACTGGGGAAGGGCCATAGACCAGAGACAGCCACCATTGGTGGTGCAGGTAGTTTGTGGGGATCAGAGGTTGGGAGGAAACAGGCCTGAAGCATCACCTACTTCCCTGAACCTTCTCTCATAGGAAGTAAAAGCCTTAAACCACAGGAGGTTGGGCATTAGATGCTTTTGCACACAGGCCTCAAAAGAGCTGATCAGTGGCTGAGGGTTAGGGGGCATCAGGAGGGTGCTGGCATGGAAGTCCTGCCTCCCTCCCTCACCCTTTTCCCTTATAAAGCAAACGCTTTTACCTACTGTCAGAGAAGAAGTAAAGGTACACTCACCCACAGGGCCCAGGGAAAGACATGTAACAGAGGAGGGAAGGATGAAATAATAACTTCTATCCCTTAAGATGAATCAGGAAGCTGTCTTGGTCCTAAAATTCTAAAAGAACTAATAATTATTAGTTCTTTTCTGCTAATAATTGTTAGCAGAAAGATAATTATCTTACTGCTAGGGGAAGAGCACGAAATTCCCACCCAAGATCTATCTAACAGTGATATAAGGCAGAGTTTGGTTGCAAGAGGTAATTTCTATTACCAGGTTTTGGGGTTTTTATTTTCCTTAATGGAACTTGACAAGCTGAGTCTAACATATAAATGGAAGACCAAATGCCAAGAAAGGGCACGGGGAGGGGGTTATTCACATGTGTTTCATAATTAGAGTCATTTAGTCAGTGTGTCACGGAGAAGACAAATACACCAGTGAAATAGGAGAGAGGACAGGAGCAGACAAATGCATATACGGGACCAGGATATATCACAGGGCAGTGCTGCAGATCAGTTGGGGAAAGGAGGGGCTTGTATGGACAATAGATTACCCATATTAAAAAAAAAAAAAAAAAGAAAAACTGGATTCCCACTTCACACTAGGCACATCAATTCTACATAGGTAAAATTGAAAAGCCGCGGGGTCGCTCACACCTGTAATCCTAGCACTTTGGACAGCCAAGGTGGGCAGATGACTTGAGCCCAGGAGTTCAAGGCCAGCCTGGGCAACATGGCAAAAACCCATCTCTACAAAAAAAAACAAAAAAGCAACTCCCACCCCGCAAAAAAAGAAACTAGCTGGGCATGGCGGCACGTGTGTGCCTGTAGTCCCAGATACTCAGGAGGCTGAGGTGGGAGGACCACTTGAGCCAGGAAGTTCAAAGCCGCAGTGAGTCATTATTGCACCACTGCACTCCAGCATGGGTGACAGAGGAAGACCCTGTCGAAAGAAGGAAAGAGAAAGAAAGAAAGGAAGGAAGGAAGGAGGGAGGGAGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAGGGAAAAGTTTGACATGATTCCAAAACAATATAGGAGAATAGCTACATAACTTGTAGCATATTCATGTGAGTGAATTCCAGCCTATATATCAATATGGAGTAATTTCAAAAGTATAATGTTATATGAAAAAGGCAAGTCATACATTTCATAAAACTAGTGTTAAAGCTCTAAAGCAAAACTTTAAAATATGTTAACATAAAATCCAAGACAGTGCTTATCTCTGGGGGACAAGGGTCATGGGGGGGTGGAGGGGAGGCAGGAGAGAAAAAAATATGCTGCCCAGAAGGACTGCTGAAAGGATGAAGGGACCCCAACACAGTGATAGAATTCCAGGGGCCGGCAGGGCAGGGGTAGTTTTCACTAGTGGCAAGGGTAGCATTGCCCATAACCAAAGACTCCGGAAGTCTCCAACAGGAGGACTTCTTGTCCCTTTACCTCACCTCTCTTCTTTCACCCAAACTCTGAGGCTTAAGAAAAGACCAGAAGAACAAGCATGAAGGAAGAGAGTGGCGGTTGGGGAAGGTTCCAGGCTGAGAGGAACAGCATGCTCAAAGGCCTCCAGGCCAAAAGGAGCAGGACGTGTTACAGAAACCAAAGGAAAACCAGAGTGACTTCACCGCAGTGAACAAAGCAAAGAGGTCACTCAAGAGAGTGGAACCAGGTCAGTGGGGCTTTTTGAGTTCCAGTAAGGAACTTGGGTGTTATTCCAGGAGAATCTAGGATTCTCCAAACAAGGGCTCAAGCCCCAGGAAAATACTCTTTCGATGCTGTATACTCCCTTTTATAGACTTGGTCAACTGTAATTACATACTTGTCTGCTTCTGGGGCTAGAATATAAGCTCACGGAATGAGGTGCTTGAATGTCATGCTCACCACTCTGTTGCAGCACCCGCCACAGTGCCTTGCTGGTAGTCAGTGTTAAATGATGATTGGTGGAGTAAGTGAATGGCTCTCTCTGCCTTATGCCCTGACTACCTGGATAACTGCCTTTGGCCTCCTGCCGACCTGAGAACACTGGGATCCCAAATTCCTCACCTGCCCAGTTGAAGTACCACTTGCTCTCCAGGTCTCTGACCCTGGTTTTGCTCGTATTTCCTGCCTTGAAGCTACCCATTCCCTAGTTTCTGTGCAAACAGAGCAAAGTTATTGAATCTTATCACAGATTGTGCTGTTCTGGTTTTTAAATATTCTAATCCTTAAGAGAATGACCCTATGCTTTTAAAAATAATTAGAATATAAGAAATTAAGATAAACACTGGTATAATATTACTCATATTAATATTAAAAGATTGAAAAGTGATTCTGTAGGTTTTCTATAGAAAAACACCTACATAAACACAAACTAGCTGATCTGGAACATCACACATAAAAGATCCACCTAGAGCAAAAAATAATTCTAGAGATTACTGACACTTTTGTCAGAGACAAAATTTGTACAATCCTCATGAGAAAAAATATTGCTGATGTTTGTTATATTAGGTCTGATTCCCATGTTCACCTCTGCTTCTGAGTGAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9122:HG3_PB_pbsv_14684:HG2_PB_pbsv_15030:HG2_PB_SVrefine2Falcon1plusDovetail_3600:HG4_PB_SVrefine2Falcon1Dovetail_9158:HG3_PB_SVrefine2PBcRDovetail_7040:HG4_Ill_SVrefine2DISCOVARDovetail_10617:HG3_Ill_SVrefine2DISCOVARDovetail_10773:HG2_PB_SVrefine2PBcRplusDovetail_3351:HG2_10X_SVrefine210Xhap12_10417:HG3_PB_assemblyticsfalcon_8317;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9122:HG3_PB_assemblyticsfalcon_8317;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0402199;ClusterMaxSizeDiff=0.0402199;ClusterMaxEditDist=0.161269;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=3650;DistBack=-12;DistForward=-2;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:92101093-92101080;PctSeqSimilarity=0.998;PctSizeSimilarity=0.9967;PctRecOverlap=0.9984;SizeDiff=-12;StartDistance=0;EndDistance=11;GTMatch=0;TruScore=99;MatchId=1739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:49:./.:26:10:9:16:0|1:35:0:0:20:0/1:33:21:0/1:150:181:.:4119:.
chr14	92116005	HG3_Ill_GATKHCSBGrefine_9882	T	TAAAAAAATTCCATGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGAATCGCGAGGTCAGGAGATCGAGAGCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGAGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_22649:HG2_PB_pbsv_15031:HG2_PB_HySA_27399:HG3_PB_pbsv_14685:HG4_PB_SVrefine2Falcon1Dovetail_9159:HG2_Ill_MetaSV_1522:HG3_Ill_MetaSV_1646:HG3_Ill_GATKHCSBGrefine_9882:HG2_Ill_GATKHCSBGrefine_9992:HG2_10X_SVrefine210Xhap12_10418;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9992:HG3_Ill_GATKHCSBGrefine_9882:HG3_Ill_MetaSV_1646;NumExactMatchSVs=3;ClusterMaxShiftDist=0.058104;ClusterMaxSizeDiff=0.0428135;ClusterMaxEditDist=0.212575;PBcalls=5;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=321;DistBack=14913;DistForward=3008;DistMin=3008;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=14:92116006-92116020;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1740.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:27:0|1:34:3:0:17:0|1:21:0:0:11:0/1:24:3:0/1:7:19:.:4119:.
chr14	92125069	HG3_PB_SVrefine2Falcon1Dovetail_9123	AG	GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGGGAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1523:HG3_PB_pbsv_14686:HG2_PB_pbsv_15032:HG3_PB_assemblyticsfalcon_8318:HG3_PB_SVrefine2Falcon1Dovetail_9123:HG4_PB_pbsv_14963;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9123:HG3_PB_assemblyticsfalcon_8318;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0821918;ClusterMaxEditDist=0.236527;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=-7;DistForward=10598;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:92125071-92125068;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9874;PctRecOverlap=0.9406;SizeDiff=4;StartDistance=16;EndDistance=17;GTMatch=0;TruScore=97;MatchId=1741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:32:0|1:38:1:3:25:./.:30:0:2:6:0/1:29:8:0/1:11:27:.:4119:.
chr14	92586720	HG3_PB_SVrefine2Falcon1Dovetail_9124	G	GTTTCGCTCTTGTTGCCTAGGCCGGAGTGCAATGGCGCAATCTTGGCTCACAGCAACCTCTGCCTCTCGGATTCAAGGGATTCTCCTACCTCAGCCTCCCAAGTAGCTGGGATTACAGGTATGCGCCACCATGCCCAGCTAATTTTGTACTTTTGGTAGAGACGAGGTTTCTCCATGTTGGTCAGGCTGGTCTTGAATTCCCAACCTCAGGTGGTCCGCCCGCCTAGGCCTCCCAAAGTGCTGGGATTACAGGCGAGAGCCATCACGCCCGGCTTTTTTTTTTTT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4008:HG2_PB_assemblyticsfalcon_8331:HG2_PB_HySA_27402:HG2_PB_SVrefine2Falcon1plusDovetail_3601:HG2_PB_pbsv_15034:HG3_PB_HySA_22651:HG3_PB_pbsv_14687:HG4_PB_HySA_21917:HG3_Ill_MetaSV_1647:HG2_Ill_MetaSV_1524:HG4_Ill_MetaSV_1591:HG4_PB_SVrefine2Falcon1Dovetail_9160:HG4_PB_SVrefine2PBcRDovetail_7476:HG4_Ill_SVrefine2DISCOVARDovetail_10618:HG3_PB_SVrefine2Falcon1Dovetail_9124:HG2_PB_SVrefine2Falcon2Bionano_7464;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4008:HG4_Ill_SVrefine2DISCOVARDovetail_10618:HG3_PB_SVrefine2Falcon1Dovetail_9124:HG2_PB_SVrefine2Falcon2Bionano_7464;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0819113;ClusterMaxSizeDiff=0.0819113;ClusterMaxEditDist=0.263069;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=284;DistBack=28240;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=272;REFWIDENED=14:92586721-92586992;PctSeqSimilarity=0.9579;PctSizeSimilarity=0.9965;PctRecOverlap=0.2526;SizeDiff=-1;StartDistance=-213;EndDistance=-213;GTMatch=0;TruScore=73;MatchId=1742.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:28:0|1:18:3:0:20:./.:0:6:1:0:0/1:6:5:./.:.:.:.:.:.
chr14	93106142	HG4_Ill_GATKHC_23896	C	CCTGCCTGACTGTGCGTTTGCTGGGAGATGCCTGACTGTGTGCTCGTCAGAGG	20	PASS	ClusterIDs=HG2_Ill_GATKHC_23970:HG2_PB_PB10Xdip_10125:HG4_PB_HySA_21921:HG4_PB_pbsv_14972:HG2_PB_HySA_27409:HG3_PB_pbsv_14694:HG4_Ill_GATKHC_23896:HG2_PB_pbsv_15040:HG3_PB_assemblyticsfalcon_8327:HG3_Ill_GATKHC_23821:HG3_Ill_250bpfermikitraw_19454:HG2_PB_assemblyticsfalcon_8338:HG2_PB_assemblyticsPBcR_8032;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHC_23970:HG4_Ill_GATKHC_23896:HG3_PB_assemblyticsfalcon_8327:HG3_Ill_GATKHC_23821:HG3_Ill_250bpfermikitraw_19454:HG2_PB_assemblyticsfalcon_8338:HG2_PB_assemblyticsPBcR_8032;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0925926;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.321429;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=92410;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1065;REFWIDENED=14:93106143-93107207;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1743.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:./.:0:0:0:0:./.:0:0:0:0:0/1:4:6:./.:.:.:.:.:.
chr14	93830925	HG3_Ill_GATKHCSBGrefine_9892	T	TAGAAAAGGGGCCTGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTTGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4582:HG3_PB_pbsv_14698:HG2_PB_PB10Xdip_10128:HG2_PB_pbsv_15046:HG3_PB_SVrefine2Falcon1Dovetail_9127:HG2_PB_assemblyticsPBcR_8041:HG2_PB_assemblyticsfalcon_8347:HG4_PB_SVrefine2PBcRDovetail_7483:HG4_Ill_MetaSV_1593:HG4_Ill_GATKHCSBGrefine_10345:HG3_PB_SVrefine2PBcRDovetail_7047:HG3_Ill_MetaSV_1648:HG3_Ill_GATKHCSBGrefine_9892:HG2_PB_SVrefine2PBcRplusDovetail_3358:HG2_PB_SVrefine2PB10Xhap12_10871:HG2_PB_SVrefine2Falcon2Bionano_7468:HG2_Ill_MetaSV_1527:HG2_Ill_GATKHCSBGrefine_10006:HG2_10X_SVrefine210Xhap12_10424:HG4_PB_SVrefine2Falcon1Dovetail_9170:HG2_PB_SVrefine2Falcon1plusDovetail_3608:HG3_PB_HySA_22657;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10424:HG2_Ill_GATKHCSBGrefine_10006:HG2_Ill_MetaSV_1527:HG2_PB_SVrefine2Falcon2Bionano_7468:HG2_PB_SVrefine2PB10Xhap12_10871:HG2_PB_SVrefine2PBcRplusDovetail_3358:HG3_Ill_GATKHCSBGrefine_9892:HG3_Ill_MetaSV_1648:HG3_PB_SVrefine2PBcRDovetail_7047:HG4_Ill_GATKHCSBGrefine_10345:HG4_Ill_MetaSV_1593;NumExactMatchSVs=11;ClusterMaxShiftDist=0.149206;ClusterMaxSizeDiff=0.149206;ClusterMaxEditDist=0.22293;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=316;DistBack=6609;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=14:93830926-93830941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:65:./.:0:23:0:3:1/1:0:6:0:10:1/1:0:27:1/1:2:69:.:.:.
chr14	94812310	HG2_PB_SVrefine2Falcon1plusDovetail_3611	T	TCCTACAATGCACGGGAAAGCCCCTGCACCACGCAGGACCGTCCAGCCCGTGATGTGCCTGCAGTGCACGGGAAAGCCCCTGCACCACGCAGGACCGTCCAGCCCGTGATGTGCCTGCAGTGCACGGGAAAGCCCCTGCACCACGCAGGACCGTCCAGCCCGTGATGTGCCTGCAGTGCACGGGAAAGCCCCTGCACCACGCAGGACCGTCCAGCCCGTGATGTGCCTGCAGTGCACGGGAAAGCCCCTGCACCACGCAGGACCGTCCAGCCCGTGATGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3611:HG3_PB_assemblyticsfalcon_8344:HG3_PB_SVrefine2Falcon1Dovetail_9130:HG4_PB_SVrefine2Falcon1Dovetail_9174:HG2_PB_SVrefine2PBcRplusDovetail_3362:HG2_PB_SVrefine2PB10Xhap12_10876:HG2_PB_SVrefine2Falcon2Bionano_7473;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3611:HG2_PB_SVrefine2PBcRplusDovetail_3362:HG2_PB_SVrefine2PB10Xhap12_10876:HG2_PB_SVrefine2Falcon2Bionano_7473;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0142857;ClusterMaxSizeDiff=0.0142857;ClusterMaxEditDist=0.110912;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=280;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=616;REFWIDENED=14:94812311-94812926;PctSeqSimilarity=0.9916;PctSizeSimilarity=1;PctRecOverlap=0.3096;SizeDiff=0;StartDistance=-194;EndDistance=-194;GTMatch=0;TruScore=76;MatchId=1745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:86:./.:0:2:1:10:./.:1:0:0:0:1/1:1:13:./.:.:.:.:.:.
chr14	94830103	HG2_Ill_SVrefine2DISCOVARplusDovetail_4017	C	ATGTCATCCTTGATGATGACCAGGAAGGGCCGGTTGAACATGACTGTCTGATACTTAGACCAGGCCTTCTCCTCCAGATGGGGGGCTCCGGTGGCTTCGGTCCCTTTCTCATCAATGGTGAGCACAGCCACATGCACAGCCTGAAGGGGAGAGAAGCAGAGATACGTTCCGAGGCTGAGCCATGCCCCAGCCCAGGCCTGGAGCGAGGCCCATGTGGACAGCCTCATCCTAGGAGGTGAGGAACTCACTCCAGCCTTTCTCCACTCGGGTGGCACTGACCCTGCACGTCCTCTCCCTCCCTGTCACACAGGCCTTGCTCCCCCTCAAGGCTTTGGCTGATGGGGCTGGCTCCCCTCCGTCTGCCTTCCCTATAAGAGCCTCTCCCCTGCTCAGGGTGCACCCACAATTCAGAAAGTGGAGGGGCATCCCCGCTGCACGTCTGCCTCCAGGGCTCTCTCCTTTCTTGTACACAGCTTGAAGCTCCTTGGGGACATGGACTCTGACAGTGTCCTTCATGGTGCCCAGACCCCAAGAGAACGCAGCCATTCACAGAACTGCCAAAGTTGTCCTTTGGCCACCTTTAGTTTTCCTAAATTAGCGTCATCTTTAGCTCAAATCATTCATTGATTCGGGCTTGGTGATGCACCAGAAACTCAAAACCTCACAGATGAAAGGGGCCAGAAAGTCTTTTGAAATGAGCCTAAGCTTTCTTGTATCAATACGGATAAATTAAGGCCCCAAACTGGAAGGTTCTGGGCAAAGGGTCAATGACACAACAGCGGGGGAGGCCCTGAAAGTGCCAGCTGCACAGGAGGCGCCTCCCCAGCTCCGCCGTCTGACCATGGCCCATCTCAGTGAATCTCAGGCATCCTCAGGAGCTCGGCCTGGGTCTTCATTTGTGTCTCTTAGCCCCTTCTTCAGCCTCAGGACAGAACTGCAACCTCCACACAATCTGCCAGCCGACACCAGGGGACAACACGGTCTTCTGGGTGACCTCACCTTGGAGAGCTTCAGGGGTGCCTCCTGACTGACTCCAGAGAGGTCGGCCTTGTTGCTGAAGATCTTGGTGATGCCCAGATTCCTAGGGACTCTCTTGAGTTTGTAGGTTCCAGAAATGGACAGTTTGGGAAAATGTAGATTGATAGACCTGCCATGCAGGAAAGAGAATCAAGGCATGGAGCAGCATTTCTCCTGTTCTTCTGGAACCCACCACAGTGCCAGTGCTTTCTCTTCTGATTGCGTCTCCCACTTAGTGCCATGTCCTCACCCATATCAAGATCAGAAGTCAGAGGGAGAGGATCAGAGAAAATAACTATTGGGTACTACGCTTAGTACCTGGGTGACAAAATAATCTATACAACAAAACCCCAGGGTTTACCTATATAACAAACCTGCACACGGACCCCTGAACCTAAAAGAAAAGTTAAAAAAAAAAATAAAACAATCAGAAGTTGACCTTGGTTTGTTCTCCTTTGAGCTCCTCTATACCCAGAATCAAAGAATGTTAGTATCAGACTAACCATCTTGTTAAGGCAGCTTGAAATGCCACCTCCTTTGAGAAGCCCTTCAGGCAGATTCTAGGTGTCCTGGAAGCGTGTCTCATCCTGCTGTGTAGTGTTGGGTCACCGGGCCCCCAGCCTGGAACATCCCCAGGGCCCTACACCCAGGGGAACGTGGGGCAGCAGTGCGCAGTGACACCCGTTCAGGGGATGAGAGAAGAGTGATCACACCAGGCCGAATGCTCCCCTCTGGTTTTCCGTGGGAAGACAGAGCCGCCCCAAGCACGGTCTGGTGTGAGCGGGCAGCCTGGCTCTGGGCTCTCTGATCAGTTATTCTCTCAGCCTCCTTGTTCTTTCTCAACCCCTGGAGCAGGTACCTCAGGAGGCGTTTGCATGGGACAGAGAAATTCCAGCCTCGATTCCTATTATGAACCTGAGACTTTCGTATTTTCATCTTGGTTTTACGGTGTAAAAATAAAAATAAACTAGATCAGCAGGGCATGGGCATAATCACGAATGCACACA	20	PASS	ClusterIDs=HG2_Ill_Spiral_996:HG4_PB_pbsv_14985:HG2_Ill_breakscan11_4584:HG3_PB_pbsv_14704:HG2_PB_pbsv_15054:HG3_PB_SVrefine2Falcon1Dovetail_9131:HG3_PB_SVrefine2PBcRDovetail_7051:HG4_PB_SVrefine2PBcRDovetail_7486:HG4_PB_SVrefine2Falcon1Dovetail_9175:HG4_Ill_SVrefine2DISCOVARDovetail_10631:HG2_PB_SVrefine2PBcRplusDovetail_3363:HG2_PB_SVrefine2PB10Xhap12_10877:HG2_PB_SVrefine2Falcon2Bionano_7474:HG2_Ill_SVrefine2DISCOVARplusDovetail_4017:HG2_10X_SVrefine210Xhap12_10430:HG2_PB_SVrefine2Falcon1plusDovetail_3612:HG2_PB_PB10Xdip_10136:HG4_Ill_Spiral_1164:HG3_Ill_Spiral_15583;NumClusterSVs=19;ExactMatchIDs=HG2_PB_PB10Xdip_10136:HG2_10X_SVrefine210Xhap12_10430:HG2_Ill_SVrefine2DISCOVARplusDovetail_4017:HG2_PB_SVrefine2Falcon2Bionano_7474:HG2_PB_SVrefine2PB10Xhap12_10877:HG2_PB_SVrefine2PBcRplusDovetail_3363:HG4_Ill_SVrefine2DISCOVARDovetail_10631;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0652748;ClusterMaxSizeDiff=0.061915;ClusterMaxEditDist=0.261285;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=2023;DistBack=799;DistForward=85623;DistMin=799;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=14:94830104-94830102;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9995;PctRecOverlap=0.9995;SizeDiff=1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=1746.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:112:1/1:3:15:0:15:./.:0:4:0:11:1/1:0:41:1/1:11:263:.:2177:.
chr14	95363387	HG3_Ill_GATKHCSBGrefine_9898	C	CACAGAGACACACAAACATACACACAGACACACACATATGCACAGAGATGCAGAGACACACACAGACACACACAT	20	PASS	ClusterIDs=HG3_PB_HySA_22662:HG3_PB_pbsv_14706:HG2_PB_PB10Xdip_10138:HG4_PB_pbsv_14990:HG2_PB_HySA_27417:HG2_PB_pbsv_15058:HG4_PB_HySA_21929:HG2_Ill_breakscan11_4585:HG4_Ill_svaba_18746:HG4_Ill_GATKHC_23924:HG4_Ill_GATKHCSBGrefine_10351:HG4_Ill_250bpfermikitraw_19762:HG4_Ill_150bpfermikitraw_19041:HG3_Ill_svaba_18900:HG3_Ill_Krunchall_19999:HG3_Ill_GATKHC_23843:HG3_Ill_GATKHCSBGrefine_9898:HG3_Ill_250bpfermikitraw_19473:HG2_PB_assemblyticsfalcon_8359:HG2_PB_assemblyticsPBcR_8056:HG2_Ill_svaba_18740:HG2_Ill_scalpel_14201:HG2_Ill_manta_4143:HG2_Ill_Krunchall_20416:HG2_Ill_GATKHC_23996:HG2_Ill_GATKHCSBGrefine_10012:HG2_Ill_250bpfermikitraw_20065:HG2_Ill_150bpfermikitraw_18920;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18920:HG2_Ill_250bpfermikitraw_20065:HG2_Ill_GATKHCSBGrefine_10012:HG2_Ill_GATKHC_23996:HG2_Ill_Krunchall_20416:HG2_Ill_manta_4143:HG2_Ill_scalpel_14201:HG2_Ill_svaba_18740:HG2_PB_assemblyticsPBcR_8056:HG2_PB_assemblyticsfalcon_8359:HG3_Ill_250bpfermikitraw_19473:HG3_Ill_GATKHCSBGrefine_9898:HG3_Ill_GATKHC_23843:HG3_Ill_Krunchall_19999:HG3_Ill_svaba_18900:HG4_Ill_150bpfermikitraw_19041:HG4_Ill_250bpfermikitraw_19762:HG4_Ill_GATKHCSBGrefine_10351:HG4_Ill_GATKHC_23924:HG4_Ill_svaba_18746;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0915033;ClusterMaxSizeDiff=0.0779221;ClusterMaxEditDist=0.27451;PBcalls=9;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=-1;DistForward=16693;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=142;REFWIDENED=14:95363357-95363498;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1747.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:55:1/1:7:33:3:20:1/1:1:50:3:39:1/1:0:53:./.:.:.:.:.:.
chr14	97441932	HG3_Ill_SVrefine2DISCOVARDovetail_10793	G	GGCAACTGAGGTTCCAAAGATTTAAGTGATGTGCCAAGGGCTTAATAAATCTCTGCTGAATGAAGGGGTGATGTGCAGCCATTTATCTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10437:HG3_PB_pbsv_14718:HG2_PB_HySA_27445:HG2_PB_pbsv_15072:HG3_PB_SVrefine2PBcRDovetail_7059:HG3_Ill_SVrefine2DISCOVARDovetail_10793:HG3_Ill_Krunchall_20028:HG3_Ill_GATKHC_23877:HG3_Ill_GATKHCSBGrefine_9907:HG3_Ill_250bpfermikitraw_19502:HG2_Ill_Krunchall_20440:HG2_Ill_GATKHCSBGrefine_10020:HG2_Ill_250bpfermikitraw_20094;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10437:HG3_PB_SVrefine2PBcRDovetail_7059:HG3_Ill_SVrefine2DISCOVARDovetail_10793:HG3_Ill_Krunchall_20028:HG3_Ill_GATKHC_23877:HG3_Ill_GATKHCSBGrefine_9907:HG3_Ill_250bpfermikitraw_19502:HG2_Ill_Krunchall_20440:HG2_Ill_GATKHCSBGrefine_10020:HG2_Ill_250bpfermikitraw_20094;NumExactMatchSVs=10;ClusterMaxShiftDist=0.076087;ClusterMaxSizeDiff=0.043956;ClusterMaxEditDist=0.271739;PBcalls=4;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=88;DistBack=3283;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=88;REFWIDENED=14:97441933-97442020;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1748.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:44:1|0:6:30:17:3:./.:13:0:3:20:0/1:18:16:./.:.:.:.:.:.
chr14	98494376	HG4_Ill_manta_3526	T	TCCAACTCAAAGACAGTTTTGTTTTGTTTTGTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGG	20	PASS	ClusterIDs=HG2_PB_HySA_27450:HG3_PB_pbsv_14721:HG4_PB_pbsv_15007:HG2_PB_pbsv_15077:HG2_PB_assemblyticsfalcon_8388:HG3_PB_assemblyticsfalcon_8371:HG2_PB_assemblyticsPBcR_8086:HG2_PB_SVrefine2Falcon1plusDovetail_3621:HG2_PB_SVrefine2PB10Xhap12_10886:HG2_Ill_manta_4152:HG2_10X_SVrefine210Xhap12_10441:HG3_PB_SVrefine2Falcon1Dovetail_9139:HG4_PB_SVrefine2Falcon1Dovetail_9184:HG4_PB_SVrefine2PBcRDovetail_7496:HG4_Ill_manta_3526:HG4_Ill_MetaSV_1597:HG3_PB_SVrefine2PBcRDovetail_7061:HG2_PB_SVrefine2PBcRplusDovetail_3375:HG2_PB_SVrefine2Falcon2Bionano_7486:HG2_Ill_MetaSV_1530:HG4_Ill_GATKHCSBGrefine_10363:HG3_Ill_manta_3386:HG3_Ill_MetaSV_1649:HG4_PB_HySA_21965:HG2_PB_HySA_27451:HG3_PB_HySA_22699:HG2_PB_PB10Xdip_10157:HG2_Ill_breakscan11_4586;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_MetaSV_1530:HG2_PB_SVrefine2Falcon2Bionano_7486:HG2_PB_SVrefine2PBcRplusDovetail_3375:HG3_PB_SVrefine2PBcRDovetail_7061:HG4_Ill_MetaSV_1597:HG4_Ill_manta_3526:HG4_PB_SVrefine2PBcRDovetail_7496;NumExactMatchSVs=7;ClusterMaxShiftDist=0.151745;ClusterMaxSizeDiff=0.151745;ClusterMaxEditDist=0.214826;PBcalls=19;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=330;DistBack=11070;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=14:98494377-98494393;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1750.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:93:1/1:0:31:0:32:1/1:0:6:0:8:1/1:0:15:1/1:3:92:.:.:.
chr14	99145108	HG3_Ill_GATKHCSBGrefine_9914	T	TTGCAGACAACCGAGATCATGCCACTGCATTCTAGTCTGGGCAACAAAGAGAGAC	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_10027:HG3_PB_HySA_22706:HG2_PB_pbsv_15080:HG2_PB_HySA_27460:HG3_Ill_Spiral_15613:HG3_Ill_GATKHC_23897:HG3_Ill_GATKHCSBGrefine_9914:HG2_Ill_GATKHC_24047;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10027:HG3_Ill_Spiral_15613:HG3_Ill_GATKHC_23897:HG3_Ill_GATKHCSBGrefine_9914:HG2_Ill_GATKHC_24047;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0535714;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.160714;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=7837;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=14:99145107-99145110;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1751.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:27:8:2:20:0|1:22:0:0:19:0/1:17:13:./.:.:.:.:.:.
chr14	100394090	HG3_PB_SVrefine2PBcRDovetail_7065	A	AGTGGTGGTGATAGTAGTGGTGGTGGTAGTGGTGGTGGTATTGGTGGTGGGGGGATGGGGGGTGTGGTGGTGGTGGTATTGGTGTGGTGATGGTGGTGGTGGTAGTGGTAGTAGTGGTGGCGGTGGTGGTGGGGTGGGGGGGGGGGTGGTGGTATGGTGTGGTGGTGATGTGGTGATGGTGGTGGTGGTGTGGGGTGGTGGTGGGTGGTGGTGGTGGATGGTGGTGGTGGTGGTGGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTAGGTGGTGGTGATGGTGGTGGGGTGGAGGTGGTGGTGGTGGGTGGTATGGTGGTGGTGATGGTGGTGGTGTGGTGAGTGGTGGTGGTGGTGGTGGTGGGTGGGTGGGGTGGTGGTGGATGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGTGGTGGTGGTGGTGTGGTGGTGGTGGTGGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGAGGTGGTGGTGGTGGTGATGGTGGTGTGGTGGTGGATGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGAGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGATGGTGGTGGTGTGGTGGTGATGGTGATGGTGGTGGTGGTGGATGGTGGTGTGGTGGATGGTGGTGGTGGTGGTGATGGTGGTGTGGTGGTGGTGGTGGTGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGATGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGATGTGGTGGTGGTGATGGTGGTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7065:HG4_PB_assemblyticsfalcon_8265:HG4_PB_SVrefine2Falcon1Dovetail_9185:HG3_PB_SVrefine2Falcon1Dovetail_9142:HG2_PB_SVrefine2Falcon2Bionano_7488:HG2_PB_pbsv_15085:HG2_PB_SVrefine2Falcon1plusDovetail_3623:HG2_PB_SVrefine2PBcRplusDovetail_3379:HG2_PB_SVrefine2PB10Xhap12_10890;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_7065;NumExactMatchSVs=1;ClusterMaxShiftDist=0.129394;ClusterMaxSizeDiff=0.129394;ClusterMaxEditDist=0.274081;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=963;DistBack=4113;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=504;REFWIDENED=14:100394091-100394594;PctSeqSimilarity=0.9399;PctSizeSimilarity=0.9948;PctRecOverlap=0.7761;SizeDiff=-5;StartDistance=-214;EndDistance=-214;GTMatch=1;TruScore=90;MatchId=1752.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:1:15:0:14:./.:7:2:11:6:./.:4:0:./.:6:51:.:1052:.
chr14	100811401	HG3_Ill_GATKHCSBGrefine_9921	C	CGCCCGGCCAGCCGCCCCGTCCGGGAGGGAAGTTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10449:HG3_PB_assemblyticsfalcon_8394:HG4_PB_assemblyticsfalcon_8273:HG4_PB_SVrefine2Falcon1Dovetail_9189:HG2_PB_assemblyticsfalcon_8413:HG4_PB_pbsv_15016:HG2_PB_SVrefine2Falcon1plusDovetail_3628:HG4_Ill_GATKHC_23978:HG4_Ill_GATKHCSBGrefine_10368:HG3_PB_SVrefine2PBcRDovetail_7069:HG3_Ill_GATKHC_23911:HG3_Ill_GATKHCSBGrefine_9921:HG3_Ill_250bpfermikitraw_19526:HG2_PB_HySA_27476:HG2_Ill_SVrefine2DISCOVARplusDovetail_4041:HG2_Ill_GATKHC_24061:HG2_Ill_GATKHCSBGrefine_10032:HG2_Ill_250bpfermikitraw_20117:HG2_10X_SVrefine210Xhap12_10450:HG3_PB_SVrefine2Falcon1Dovetail_9147:HG2_PB_PB10Xdip_9356:HG2_PB_SVrefine2PBcRplusDovetail_3382:HG2_PB_SVrefine2PB10Xhap12_10895:HG2_PB_SVrefine2Falcon2Bionano_7492;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10450:HG2_Ill_250bpfermikitraw_20117:HG2_Ill_GATKHCSBGrefine_10032:HG2_Ill_GATKHC_24061:HG2_Ill_SVrefine2DISCOVARplusDovetail_4041:HG2_PB_HySA_27476:HG3_Ill_250bpfermikitraw_19526:HG3_Ill_GATKHCSBGrefine_9921:HG3_Ill_GATKHC_23911:HG3_PB_SVrefine2PBcRDovetail_7069:HG4_Ill_GATKHCSBGrefine_10368:HG4_Ill_GATKHC_23978;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0631579;ClusterMaxSizeDiff=0.0631579;ClusterMaxEditDist=0.227979;PBcalls=13;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=97;DistBack=45;DistForward=20205;DistMin=45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=27;REFWIDENED=14:100811400-100811429;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1754.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:1:26:0:24:./.:1:4:1:3:1/1:0:25:./.:.:.:.:.:.
chr14	100929250	HG2_10X_SVrefine210Xhap12_10452	C	CTGCTCCTTCCTTTTTCCCTTCTCCCCTTCTCTTCTCTCCCCTCTTCCTCTCCCCCTGCTCCTTCCTTCCTTTTTCCCTTCTCTTTCCCTCTCCCCGCTTCCTCTCCCCCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9191:HG4_PB_SVrefine2PBcRDovetail_7500:HG2_10X_SVrefine210Xhap12_10452:HG4_PB_HySA_21986:HG4_PB_pbsv_15018:HG2_PB_pbsv_15091:HG2_PB_HySA_27480;NumClusterSVs=7;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10452:HG4_PB_SVrefine2PBcRDovetail_7500;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.271028;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=110;DistBack=-192;DistForward=1820;DistMin=-192;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=302;REFWIDENED=14:100929135-100929436;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1755.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:26:0|1:41:0:3:25:./.:2:20:14:1:./.:6:2:./.:.:.:.:.:.
chr14	101262946	HG2_PB_HySA_27486	T	TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTGTCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCTTCTTTCTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3389:HG2_PB_HySA_27486:HG2_PB_PB10Xdip_9364:HG2_PB_assemblyticsfalcon_8423:HG2_PB_assemblyticsfalcon_8424:HG2_PB_SVrefine2Falcon1plusDovetail_3635:HG2_PB_SVrefine2Falcon1plusDovetail_3634:HG2_PB_pbsv_15097:HG4_PB_pbsv_15023:HG2_PB_SVrefine2PB10Xhap12_10901;NumClusterSVs=10;ExactMatchIDs=HG2_PB_HySA_27486;NumExactMatchSVs=1;ClusterMaxShiftDist=0.34192;ClusterMaxSizeDiff=0.34192;ClusterMaxEditDist=0.34192;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=181;DistBack=2;DistForward=65322;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=60;REFWIDENED=14:101262894-101262953;PctSeqSimilarity=0.9564;PctSizeSimilarity=0.9282;PctRecOverlap=0.9282;SizeDiff=-14;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=93;MatchId=1756.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:31:0|1:16:5:3:15:./.:0:2:10:1:0/1:7:4:./.:.:.:.:.:.
chr14	101339787	HG3_PB_HySA_22730	C	CCACCAGCCCCTCCTCCACCCATGTGTCACACTAATCCCCCCTCCACCCATGTGTCATACCAGCCCCTCCTCCACCCATGGGTCACACCAACCCCCTCCTCCACCCACGCACGGTACCGCTAACCCCTCCTCCACCCATGTGTCACACACCAACTCCCTCCTCCACCCACGCAGGTACCGCTAACCCCCTCCTCCACCCATGTGTCCCACTAACCCCCTCCTCAACCCGATGTGTCCCACTAACCCCCTCCTCCACCCGTGTGTCACACCAACCCCCTCCTCCACCCCGTGTGTCACACCAACCCCCTCCTCCACCCATGTCACACCAACCCCCTCCTCAACCCGTGTGTCACACCAACCCCCTCCTCAACCCGTGTCACACCAACCCCTTCCTCCACCCGTGTGTCCACACCAACCCCTCCTCAACCCGTGTCACACCAACCCCCTCCCCCACCCGTGTGTCACACCAACCCCCTCCTCCACCCATGTCACACCAACCCCCTCCTCCACCCGTGTGTCACACCAAACCCCCTCCTCAACCCGTGTCACACCAAACCCCCTCCCCCACCCGTGTGTCACACCAACCCCCTCCTCCACCCGTGTGTCACACCAACCCCCTCCTCAACCCGTGTCACACCAACCCCCTCCCCCCACCCGTGTGTCACACCAACCCCCCTCCTCCACCCATGTCACACCAACCCCCTCCTCAACCCGTGTGTCACACCAACCCCCTCCTCTCCACCCGTGTGTCACACCAACCCCTCCCCCACCCGTGTGTCACACCAACCCCCTCCTCAACCCGTGTCACACCAACACCCCTCCCCCACCCGTGTGTCACACCAACCCCCTCCTCCCACCCATGTCACACCAACCCCCTCCTCAACCCGTGTGTCACACCAAACCCCCTCCTCAACACCGTGTCACACCAACCCCCTCCTCAACCCGTGTGTCACACCCAACCCCTCCTCCACACCCGTGTGTCACACCAACCCCCTCCCCCACCCGTGTGTCACACCAACCCCCTCCTCAACCCGTGTCACACCAACCCCTCCCCCACCCGTGTGTCACACCAACCCCCTCCTCAACCCGTGTCACACCAACCCCCTCCTCCACCCGTGTGTCACACCAACCCCCTCTCCCCCACCCGTGTGTCACACACCAACCCCTCCTCCACCCGTGTGTCACACCAAACCCCTCCCCCACCCGTGTGTCACACCAACCCCTCCCCCACCCGTGTGTCACACCAACCCCCTCAACCCGTGTGTCACACCAACCCCCTCAACCCGTGTGTCACACCAACCCCCTCCCCCACCCGTGTGTCACACCAACCCCCTCCCCCACCCGTGTGTCACACACAACCCCCTCCTCAACCCGTGTGTCACACCAACCCCCTCCTCAACCCATGTCACACCAACCCCCTCCCCCACCCGTGTTTCACACCAACCCCTCCTCAACCCGTGTGTCACACCAACCCCCTCCTCAACCCATGTGTCACACCAACCCCCTCCAGCCATGTGTCACACCAACCCCCTCCTCCACCCATGGGTCACACCAACACTCTCCCCGACACATGTGTCATACCAACGTCCTCCTCCAACCCATGTATCACAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3391:HG2_PB_pbsv_15099:HG4_PB_pbsv_15025:HG2_Ill_breakscan11_4587:HG3_PB_HySA_22731:HG3_PB_pbsv_14743:HG2_PB_HySA_27488:HG3_PB_HySA_22730:HG3_PB_SVrefine2Falcon1Dovetail_9152:HG4_PB_SVrefine2Falcon1Dovetail_9196:HG2_PB_SVrefine2Falcon2Bionano_7498:HG2_PB_SVrefine2Falcon1plusDovetail_3637:HG2_PB_SVrefine2PB10Xhap12_10903;NumClusterSVs=13;ExactMatchIDs=HG3_PB_HySA_22730;NumExactMatchSVs=1;ClusterMaxShiftDist=0.136978;ClusterMaxSizeDiff=0.136349;ClusterMaxEditDist=0.251599;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1610;DistBack=20;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=307;REFWIDENED=14:101339535-101339841;PctSeqSimilarity=0.9866;PctSizeSimilarity=0.9863;PctRecOverlap=0.9863;SizeDiff=22;StartDistance=-5;EndDistance=-5;GTMatch=1;TruScore=98;MatchId=1757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:95:1/1:0:21:0:19:./.:11:25:14:49:1/1:0:13:0/1:15:50:.:.:.
chr14	101423612	HG2_PB_SVrefine2PB10Xhap12_10904	A	AATCCTATAGATTATTTAAGAATATATAAGGATCTTATTTGGCCTTTTTAAATGAGTTTTTACTCTATCATAATAAATTGATCAATAAAAGGATCAACATATGGATACAAATACATAAAGGTAAATAGGGTGAAGCATCATCAAATTATGGAAAGATGTGGTGGCAAGAGAATCCACGTGTATGTACACTGAAGACACTGAATGTCATTAAAAAACCAATGGTTCAGGCTGTTACACCTGGTTAAAAATCATGCAGGTAACATAAATAATAGCCTGTATTCTGGGCTAATGGAAAGTTTGATGTTGTTTTTCTTAAGTTAAAGTGTCACATGTATTACCCCAAATCAGTATATACCTCGAACTACAAGGATCAATGGAGAGAATTTCTCAATTTTGTTTTTGTCTGTACTACTTTGTATTTCTTAGAATGGACGCACCTGAACTGACCTATGCATTTGCAAGCTCCACGGCTGTCCCAGTGTTTGGAGCATGGAGACCGATTTGAGTTATAGTCAGTGTTCTTGCCTTGGTTTTGGTGGCTTATTTAGGATACTTACTGAATACTTTTTTAAAAAGTATTAAATATAACCAAAGAAGGCCAACTGTGGCCCAATGATAAGTATGGATTTGACATGAAATATTATGTTGATTGATCAATTTTTGTAACAATGGGAATGATTAATGAAAGAGGTATATTCAGTGATATACACATATGTCACTAAATGAATGATGTGATTCCATAGATAGATATTAGGGATATAAGAATCTCTTTTCTGTGAGATTTTGTGATTCACAGATAATTATTTTATTATGTTTGATGAATTGAGAATTAATTAATAAGCAAATGTACAGTAGTATGAAGAAAAAGACATGTAAACCTGAACCAATGATTGATGGTTTAGGAGTCATGGGTGATGAATAATATGTGTCTGGAACCTAAAGGTTTGCAGAAAACAAAATCTGATCTATTTCCTAGGGTCATTTGCAAATGACAATCAATGTTTGAAATGATAGATTGATGTTAATAATGTGTAAGAATCTACTTTTATTTTGGATTCATGGATTCATATATTGTTATTATTTAAAATTGATCCATGATGAAAGTATTAAACTAACATATAATTCGACAAATATGAAGATGGAGAGATGGACTTCAACCATGTGATGATTCAAGATATACGATCAACATAAAATGAAACACTAGCTCCCAACATGGTGAAACCCTGTCTCTATTAAAAATACAAAAAATTAAATTGACGTGGTGGTGCACGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACTCGGGAGGTGGAGGTTGCCGTGAGCCAAGATTGCGCCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTAAAAAAAAAAAAAAAAAAAAAGAAAGAAATGGACCCAAGGGTGTTACCTCTTTTTGATTAGTGATCATATAGATGCTGGGTAGTAGGAATTTTATTGCTTGGAGCAGTCCTTTTGAGGTTGTTTGTTTTGTTCAGAATGAACATATATGTTATGAAAAATTAATAAATACCTAAATTACTGGGAAAGCAAAGATCGACAAAAAGGTCTTAGTTTTTAAAATCAGCTGCTTTGCTTTGTATTTCTTAGAAGGGATGCACTGGCGCTGATTTAAGAATTCTCTCATAGTCACAAGACGTATGGTTGCCTCTGTGTAGGTTCCTGGAAACCAATGTGAGTATGAGTCAATATTCTTGTTTTCGTTTGAGTGTTTTTTAAGAGGTATCACTGTGTTATTATACACTTTGGCATATAATTAGTTAATGTCTTAAGAATGGGATTGATGTAATGCATTATGTTGATTAATCTGTATGTGAAACACTGCATTAAATTAATAAAATGTATCTAGTGTCTACGGGAAATAATTTTGTAGACAGACATTAGATATTCAAGAATCTTGCTCTTGAGTTTTTCTGACTCTTTGATATTTACTTATTCTTATTAGTGAGTTGATGAATTAATCTATCAATAAATGGAGACATGAATGAAGAAAAAGAGCTCCAGGTCTGGACCAAAGACGAAGTTTGGTGATGTATGAATTATGAACAATAAATACCTGTGTTTGGAACTTTGAGGTCCAACATGAAAACTAGCTTACTCCCTATGATGTAATTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7499:HG4_PB_pbsv_15026:HG4_PB_HySA_21994:HG3_PB_pbsv_14744:HG2_PB_HySA_27490:HG2_PB_PB10Xdip_9370:HG4_PB_HySA_21993:HG2_PB_SVrefine2Falcon1plusDovetail_3638:HG4_PB_SVrefine2PBcRDovetail_7504:HG2_PB_SVrefine2PBcRplusDovetail_3392:HG2_PB_SVrefine2PB10Xhap12_10904:HG3_PB_SVrefine2Falcon1Dovetail_9153:HG3_PB_SVrefine2PBcRDovetail_7074:HG4_PB_SVrefine2Falcon1Dovetail_9197;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10904:HG2_PB_SVrefine2PBcRplusDovetail_3392:HG4_PB_SVrefine2PBcRDovetail_7504;NumExactMatchSVs=3;ClusterMaxShiftDist=0.058523;ClusterMaxSizeDiff=0.058523;ClusterMaxEditDist=0.237977;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=2168;DistBack=19932;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=282;REFWIDENED=14:101423613-101423894;PctSeqSimilarity=0.9989;PctSizeSimilarity=0.9995;PctRecOverlap=0.9945;SizeDiff=1;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=99;MatchId=1758.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:128:1/1:3:30:0:33:1/1:0:10:0:11:1/1:0:42:1/1:12:232:.:1965:.
chr14	101693278	HG4_Ill_250bpfermikitraw_19819	C	CACAGACAGGGGCACCCAGGGACAGGCAGACCCACAGACAGGTGCGCCCAGAGACAGGCAGACCG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9371:HG2_PB_pbsv_15104:HG4_PB_assemblyticsfalcon_8293:HG3_PB_pbsv_14748:HG4_PB_HySA_21998:HG3_PB_HySA_22735:HG4_Ill_Krunchall_20785:HG4_Ill_GATKHC_23997:HG4_Ill_GATKHCSBGrefine_10374:HG4_Ill_250bpfermikitraw_19819:HG4_Ill_150bpfermikitraw_19096:HG3_PB_assemblyticsfalcon_8411:HG3_Ill_scalpel_14495:HG3_Ill_Spiral_15629:HG3_Ill_GATKHC_23922:HG3_Ill_GATKHCSBGrefine_9925:HG3_Ill_150bpfermikitraw_18993:HG2_PB_assemblyticsfalcon_8433:HG2_Ill_scalpel_14246:HG2_Ill_manta_4155:HG2_Ill_Krunchall_20468:HG2_Ill_GATKHC_24076:HG2_Ill_GATKHCSBGrefine_10037:HG2_Ill_250bpfermikitraw_20126:HG2_Ill_150bpfermikitraw_18973:HG4_Ill_svaba_18804:HG3_Ill_svaba_18963:HG2_Ill_svaba_18806:HG2_PB_HySA_27498;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18973:HG2_Ill_250bpfermikitraw_20126:HG2_Ill_GATKHCSBGrefine_10037:HG2_Ill_GATKHC_24076:HG2_Ill_Krunchall_20468:HG2_Ill_manta_4155:HG2_Ill_scalpel_14246:HG2_PB_assemblyticsfalcon_8433:HG3_Ill_150bpfermikitraw_18993:HG3_Ill_GATKHCSBGrefine_9925:HG3_Ill_GATKHC_23922:HG3_Ill_Spiral_15629:HG3_Ill_scalpel_14495:HG3_PB_assemblyticsfalcon_8411:HG4_Ill_150bpfermikitraw_19096:HG4_Ill_250bpfermikitraw_19819:HG4_Ill_GATKHCSBGrefine_10374:HG4_Ill_GATKHC_23997:HG4_Ill_Krunchall_20785;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0757576;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.208955;PBcalls=9;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=8288;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=24;REFWIDENED=14:101693277-101693303;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1759.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:53:1/1:3:20:1:25:1/1:1:25:1:32:1/1:0:22:./.:.:.:.:.:.
chr14	101885929	HG4_PB_SVrefine2Falcon1Dovetail_9200	A	AAAATAAAATAAAATAATATATATATAAAATTAAATAAAATAAAACAAAATTTTATATTATAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10908:HG2_PB_PB10Xdip_9374:HG3_PB_assemblyticsfalcon_8414:HG4_PB_SVrefine2Falcon1Dovetail_9200:HG2_PB_SVrefine2PBcRplusDovetail_3396;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10908:HG4_PB_SVrefine2Falcon1Dovetail_9200:HG2_PB_SVrefine2PBcRplusDovetail_3396;NumExactMatchSVs=3;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.302521;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=62;DistBack=53429;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=68;REFWIDENED=14:101885928-101885998;PctSeqSimilarity=0.9505;PctSizeSimilarity=1;PctRecOverlap=0.2381;SizeDiff=0;StartDistance=-48;EndDistance=-48;GTMatch=0;TruScore=72;MatchId=1761.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:47:./.:4:23:7:12:./.:4:0:8:0:0/0:39:0:./.:.:.:.:.:.
chr14	102179038	HG3_PB_pbsv_14754	C	CGCCCCCACCTACCGTCATCTCTCCCACCCACCGTCATCTCACCCCACCCACCGCCATTCTCA	10	PASS	ClusterIDs=HG4_PB_HySA_22004:HG2_PB_HySA_27505:HG4_PB_pbsv_15037:HG2_PB_pbsv_15112:HG2_PB_PB10Xdip_9377:HG3_PB_pbsv_14754:HG2_PB_assemblyticsfalcon_8440:HG3_PB_assemblyticsfalcon_8419:HG4_PB_HySA_22005;NumClusterSVs=9;ExactMatchIDs=HG3_PB_pbsv_14754;NumExactMatchSVs=1;ClusterMaxShiftDist=0.097561;ClusterMaxSizeDiff=0.0813008;ClusterMaxEditDist=0.220472;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=62;DistBack=53;DistForward=49;DistMin=49;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=14:102179037-102179039;PctSeqSimilarity=0.95;PctSizeSimilarity=0.9677;PctRecOverlap=0.8571;SizeDiff=2;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=92;MatchId=1763.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:42:1/1:2:17:1:10:./.:85:5:104:10:./.:0:0:./.:.:.:.:.:.
chr14	102316009	HG3_Ill_MetaSV_1656	G	GATCAACCAGTCTTTTAACGATTACTGGCTTTGTGTCTAAGGAAGTCCTTCTCTACTTCTTTCCCTATGTAAGACATTCTTCTATATTATTTTTTAAAAGCATTAGAGTTTTGCCTTTCAGATTTAAGTCTATAACCCACCAGGAGTTTGTTTTTTTAAT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9383:HG2_PB_assemblyticsfalcon_8445:HG2_PB_SVrefine2Falcon1plusDovetail_3644:HG4_Ill_manta_3531:HG2_PB_SVrefine2PBcRplusDovetail_3399:HG2_PB_SVrefine2PB10Xhap12_10912:HG2_PB_SVrefine2Falcon2Bionano_7505:HG2_Ill_manta_4158:HG2_Ill_SVrefine2DISCOVARplusDovetail_4052:HG2_10X_SVrefine210Xhap12_10465:HG3_PB_pbsv_14758:HG4_Ill_GATKHCSBGrefine_10380:HG2_Ill_GATKHCSBGrefine_10042:HG2_PB_pbsv_15115:HG4_Ill_MetaSV_1603:HG4_PB_assemblyticsfalcon_8301:HG3_PB_assemblyticsfalcon_8426:HG4_PB_pbsv_15041:HG4_PB_SVrefine2PBcRDovetail_7509:HG4_PB_SVrefine2Falcon1Dovetail_9204:HG4_Ill_SVrefine2DISCOVARDovetail_10666:HG4_Ill_GATKHCSBGrefine_10379:HG3_PB_SVrefine2Falcon1Dovetail_9161:HG3_Ill_manta_3393:HG3_Ill_Spiral_15635:HG3_Ill_MetaSV_1656:HG3_Ill_GATKHCSBGrefine_9927:HG2_Ill_GATKHCSBGrefine_10041:HG2_10X_SVrefine210Xhap12_10464:HG3_PB_SVrefine2PBcRDovetail_7080;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10464:HG2_Ill_GATKHCSBGrefine_10041:HG3_Ill_GATKHCSBGrefine_9927:HG3_Ill_MetaSV_1656:HG3_Ill_Spiral_15635:HG3_Ill_manta_3393:HG3_PB_SVrefine2Falcon1Dovetail_9161:HG4_Ill_GATKHCSBGrefine_10379:HG4_Ill_SVrefine2DISCOVARDovetail_10666:HG4_PB_SVrefine2Falcon1Dovetail_9204:HG4_PB_SVrefine2PBcRDovetail_7509;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0866873;ClusterMaxSizeDiff=0.0804954;ClusterMaxEditDist=0.203593;PBcalls=15;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=159;DistBack=66445;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=14:102316010-102316011;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1764.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:43:1/1:1:27:0:12:1/1:0:28:1:36:1/1:0:41:./.:.:.:.:.:.
chr14	102351635	HG2_PB_SVrefine2PBcRplusDovetail_3400	A	ACCCACAGCCCTGGCCCCTCCCATCCCGTGCCGGCTTGCACAGCCTGCGTCGGGAGCACCCTGCCTTTCCCTCTGCAGTCATTAGGGCCCGCAGCCCCGGCCTCTCCCATCCCGTGCCGGCTTGCACAGCCTGCGTCGGGAGCACCCTGCCTTTCCCTCTGCAGTCATTAGGGCCCACAGCCCCGGCCTCTCCCATCCCGTGCCAGCTTGCACAGCCTGCGTCGGGAGCACCCTGCCTTTCCGTCTGCAGTCATTAGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10913:HG2_PB_pbsv_15116:HG4_PB_pbsv_15042:HG3_PB_assemblyticsfalcon_8427:HG3_PB_SVrefine2Falcon1Dovetail_9162:HG2_PB_HySA_27512:HG4_PB_SVrefine2Falcon1Dovetail_9205:HG2_PB_SVrefine2PBcRplusDovetail_3400:HG2_PB_SVrefine2Falcon2Bionano_7506:HG2_PB_SVrefine2Falcon1plusDovetail_3645;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3645:HG2_PB_SVrefine2Falcon2Bionano_7506:HG2_PB_SVrefine2PBcRplusDovetail_3400:HG4_PB_SVrefine2Falcon1Dovetail_9205;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0801527;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.192593;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=258;DistBack=-255;DistForward=31;DistMin=-255;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=259;REFWIDENED=14:102351636-102351894;PctSeqSimilarity=0.9945;PctSizeSimilarity=1;PctRecOverlap=0.9382;SizeDiff=0;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=97;MatchId=1765.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:38:1|0:2:24:17:0:./.:0:11:3:1:0/1:6:6:./.:.:.:.:.:.
chr14	103028439	HG2_PB_SVrefine2PB10Xhap12_10914	T	TCACTTAGCAAAACTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCGCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4589:HG3_PB_HySA_22748:HG2_PB_HySA_27523:HG4_PB_pbsv_15045:HG2_PB_HySA_27522:HG2_PB_pbsv_15120:HG3_PB_assemblyticsfalcon_8433:HG4_PB_assemblyticsfalcon_8307:HG2_PB_assemblyticsPBcR_8154:HG2_PB_HySA_27521:HG3_PB_HySA_22747:HG3_PB_pbsv_14761:HG4_PB_HySA_22012:HG3_PB_SVrefine2Falcon1Dovetail_9163:HG3_Ill_MetaSV_1658:HG4_PB_SVrefine2PBcRDovetail_7510:HG4_PB_SVrefine2Falcon1Dovetail_9206:HG4_Ill_manta_3532:HG4_Ill_SVrefine2DISCOVARDovetail_10670:HG4_Ill_MetaSV_1604:HG4_Ill_GATKHCSBGrefine_10382:HG3_PB_SVrefine2PBcRDovetail_7082:HG3_Ill_SVrefine2DISCOVARDovetail_10833:HG3_Ill_GATKHCSBGrefine_9929:HG2_PB_SVrefine2PBcRplusDovetail_3401:HG2_PB_SVrefine2PB10Xhap12_10914:HG2_PB_SVrefine2Falcon2Bionano_7507:HG2_Ill_SVrefine2DISCOVARplusDovetail_4054:HG2_Ill_MetaSV_1538:HG2_Ill_GATKHCSBGrefine_10044:HG2_10X_SVrefine210Xhap12_10468:HG2_PB_SVrefine2Falcon1plusDovetail_3646:HG2_PB_PB10Xdip_9387:HG2_Ill_manta_4161;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10468:HG2_Ill_GATKHCSBGrefine_10044:HG2_Ill_MetaSV_1538:HG2_Ill_SVrefine2DISCOVARplusDovetail_4054:HG2_PB_SVrefine2Falcon2Bionano_7507:HG2_PB_SVrefine2PB10Xhap12_10914:HG2_PB_SVrefine2PBcRplusDovetail_3401:HG3_Ill_GATKHCSBGrefine_9929:HG3_Ill_SVrefine2DISCOVARDovetail_10833:HG3_PB_SVrefine2PBcRDovetail_7082:HG4_Ill_GATKHCSBGrefine_10382:HG4_Ill_MetaSV_1604:HG4_Ill_SVrefine2DISCOVARDovetail_10670:HG4_Ill_manta_3532:HG4_PB_SVrefine2Falcon1Dovetail_9206:HG4_PB_SVrefine2PBcRDovetail_7510;NumExactMatchSVs=16;ClusterMaxShiftDist=0.157303;ClusterMaxSizeDiff=0.157303;ClusterMaxEditDist=0.222222;PBcalls=21;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=312;DistBack=36459;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=14:103028440-103028457;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1766.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:./.:0:3:0:7:./.:0:3:0:3:1/1:0:15:1/1:2:64:.:.:.
chr14	104551741	HG2_PB_SVrefine2Falcon2Bionano_7517	C	CGCCCCGCCCCGCACCCCGCCAGGCCCCGCCCCGCACCCCGCCAGGCCCCGCCCCGCACCCCGCCAGGCCCCGCCCCGCACCCCGCCAGGCCCCGCCCCCACCCCGCCAGGCCCCGCCTCTCTCTCCGACCCTGGACAGTCCCCGGGACCCACCCCGCCCCCAGGTCCTGCCCCCGCCCGCCTCCGCGGGGCCTCCCACCCTCCCGGGCAGACTCCACTCCCGCCCCCTCCCCGTGGGTGCCCCCGCCAGGCCCCGCCCCCACCCCGCCAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3656:HG2_PB_HySA_27559:HG4_PB_pbsv_15057:HG2_PB_pbsv_15137:HG3_PB_pbsv_14774:HG4_PB_HySA_22033:HG2_PB_HySA_27558:HG2_PB_PB10Xdip_9394:HG2_PB_HySA_27557:HG2_PB_SVrefine2PBcRplusDovetail_3410:HG4_PB_SVrefine2Falcon1Dovetail_9216:HG3_PB_SVrefine2PBcRDovetail_7091:HG3_PB_SVrefine2Falcon1Dovetail_9171:HG2_PB_SVrefine2PB10Xhap12_10925:HG2_PB_SVrefine2Falcon2Bionano_7517;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7517:HG2_PB_SVrefine2PB10Xhap12_10925;NumExactMatchSVs=2;ClusterMaxShiftDist=0.166052;ClusterMaxSizeDiff=0.162362;ClusterMaxEditDist=0.269373;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=270;DistBack=-1;DistForward=8217;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=257;REFWIDENED=14:104551742-104551998;PctSeqSimilarity=0.9827;PctSizeSimilarity=0.9704;PctRecOverlap=0.6937;SizeDiff=8;StartDistance=-79;EndDistance=-79;GTMatch=1;TruScore=88;MatchId=1767.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:68:1/1:1:20:2:11:./.:0:5:0:3:./.:0:0:./.:.:.:.:.:.
chr14	104652116	HG2_PB_SVrefine2Falcon2Bionano_7519	A	ATGGGGTGGGGTGATTGTAGGGGATGGGGTGGGGTAGAGGGGTGGGGTGGGGTGATTGTAGGGGATGGGGTGGGGTAGAGGGATGGGGTGGGGTGATTGTAGGGGGTGGGGTGGGGTAGAGGGG	10	PASS	ClusterIDs=HG3_PB_HySA_22770:HG2_PB_SVrefine2Falcon2Bionano_7519:HG2_PB_SVrefine2Falcon1plusDovetail_3658:HG4_PB_SVrefine2Falcon1Dovetail_9218:HG3_PB_SVrefine2Falcon1Dovetail_9173;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7519;NumExactMatchSVs=1;ClusterMaxShiftDist=0.128755;ClusterMaxSizeDiff=0.128755;ClusterMaxEditDist=0.313901;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=123;DistBack=14;DistForward=37;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=89;REFWIDENED=14:104652099-104652187;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1768.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:0|1:22:2:1:21:./.:3:0:0:0:./.:1:0:./.:.:.:.:.:.
chr14	104698126	HG2_PB_SVrefine2Falcon2Bionano_7524	G	GTCACCATCACCATAATCATCATATCACCATCACAACACCCTCACCACCATCATCATTACCATCATGATCATCACTGTCACATCATCACCATCATTACCATCATCATTACCATCATCACTATTACACACCATCATCAACATCATCCCCACTGTCATCATCACCATCACCACCATCATCATCACCATCACCATCACCATCAACATCATCATCACCATCACCACCATCACCATCAACATCAACATCACCATCACCACCATCACCATCAACATCAACATCACCATCATCACCATCACCATCACCACCATCACCACCATCACCATCACCATCACCACCATCACCACCATCACCACCATCATCACCATCATCATCACCATCACCATCAGCATCATCATCACCATCACCACCATCATCATCACCATCAACATCAACATCACCATCATCACCATCACCATCATCACCATCACCATCACCACCATCACCATCACCACCATCACCATCACCACCATCATCACCACCATCATCTCCACCATCACCACCATCATCACCATCACCATCACCATCAACATCATCATCACCATCACCACCATCACCATCAACATCAACATCACCATCATCACCATCACCATCACCACCATCATCACCATCATCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3663:HG4_PB_HySA_22042:HG3_PB_pbsv_14784:HG2_PB_HySA_27580:HG4_PB_pbsv_15063:HG4_Ill_MetaSV_1607:HG2_PB_PB10Xdip_9405:HG2_Ill_breakscan11_4591:HG2_PB_pbsv_15143:HG2_PB_SVrefine2PB10Xhap12_10930:HG2_PB_SVrefine2PBcRplusDovetail_3415:HG2_PB_SVrefine2Falcon2Bionano_7524:HG3_PB_SVrefine2PBcRDovetail_7095:HG3_PB_SVrefine2Falcon1Dovetail_9176:HG4_PB_SVrefine2Falcon1Dovetail_9220:HG4_PB_SVrefine2PBcRDovetail_7518;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7524:HG2_PB_SVrefine2PBcRplusDovetail_3415;NumExactMatchSVs=2;ClusterMaxShiftDist=0.209358;ClusterMaxSizeDiff=0.2046;ClusterMaxEditDist=0.274385;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=649;DistBack=6522;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=825;REFWIDENED=14:104698127-104698951;PctSeqSimilarity=0.9853;PctSizeSimilarity=0.9877;PctRecOverlap=0.8351;SizeDiff=8;StartDistance=-103;EndDistance=-103;GTMatch=1;TruScore=93;MatchId=1770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:1:28:2:21:./.:7:38:8:53:1/1:0:18:1/1:1:135:.:2722:.
chr14	105149647	HG2_Ill_MetaSV_1540	G	GTGCCTCAGCCTGGGGCTGCCACTCCCTGCCTCCCACCGTCCACTCTAAGAGCCTGGCTCCCCTGGAAGGGTGCTGCCCTTCCCTGGGCCTCAGCGTGCCCTGTAAAGTGGGGGTCCCGGTGCCCACTGCACACGGCAGGGAGGATGGAAGGAGACCCGGTGTGCTGAGCACTGGCACTTGCAGCTGGCACCTGGACATCTACGGAATGTGCTTCCGTGGTTGTCATTGCTGTTACAGATCCATCCACGTGTGGCTGACTCAGAGCTGTGACATTAAGGGAAAATAAAGGAAATGATTGAGCTGCCTTTTCAGACAACACTGGAATTTTTGAAGAACCCGAGAATCAGTATATTGAAAGGTCTGCGCCGTGGAGTCCCTGCTTGTGAAGCCCGTGTGCATCCGAAGTGCTGACAAGGACAATGGAAAGACGCTTCATTCATGAGCTCCTTTAAAATGCCAGACGGGCCCCTCGACAGGGACGGGGAGAATTCAGCAGATGAATAAGATTGGCAACATAAACCCAAACGTTTGGGGAAAAAACTGATTTTATTATTTTTATTTTACTTTATTTTATTTTTTGAGACAGGGTATCGCTCTGTCACCCAGGCTAGAGTGCAGTGGCTTGATCTTGGCTCATTGCACCCCTGGCTTCCCGGGTTCAAGCGCTCCTCATGCCTCAGCCTCCCAAGTAGGTAGGACTACAGACACACGCCATGACGCCTGGTTAATTTTCGTATTTTTTATAAAGACAGGGTTTCCCCATGTTGGCCAGGCTGGTCTTGAACCCCTGGGCTCAAGCGGTCCACCCTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCTGGCAAAAATGAGACTTCCAATGTGCTACTTTAATAAACTAAGTATTAATGTTGAAAACCCAAGGAGCAGCAAAGGTCCTCAAAGACACAGAGACCTGGGGGAGGGGTCTGCGGGTGGCTGCAATGGGGGAGGGGAGGGGTGGAGGGGAGGAGGGGCCCTGGGGAGGCAGCACAGACTGGTTTGTAGAGTGACCCCTCCGTGGCTTCCTGGTGACCCTTCCAGAATAAATCCCAAGCATGCATCCTCCTACA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10495:HG4_PB_pbsv_15075:HG4_PB_HySA_22050:HG2_PB_pbsv_15153:HG2_PB_PB10Xdip_9422:HG4_Ill_MetaSV_1610:HG2_Ill_MetaSV_1540:HG4_PB_SVrefine2Falcon1Dovetail_9230:HG2_PB_SVrefine2Falcon1plusDovetail_3673:HG4_PB_SVrefine2PBcRDovetail_7527:HG2_PB_SVrefine2PBcRplusDovetail_3423:HG2_PB_SVrefine2Falcon2Bionano_7530:HG2_PB_SVrefine2PB10Xhap12_10941;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_MetaSV_1540:HG4_Ill_MetaSV_1610;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0412002;ClusterMaxSizeDiff=0.0403045;ClusterMaxEditDist=0.20372;PBcalls=10;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=1108;DistBack=-65;DistForward=64;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=294;REFWIDENED=14:105149419-105149712;PctSeqSimilarity=0.9995;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1771.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:33:0|1:20:2:1:16:./.:7:14:10:0:0/1:27:14:0/1:32:39:.:1214:.
chr14	105481735	HG4_Ill_manta_3537	A	ACAGAACTCTCAGCCATTATCTGCCGCCATCAGTCGGAAACCAGCCCTTTACCTTCAGTAACCGGCCAGGAACTACACACAAAAG	20	PASS	ClusterIDs=HG2_PB_HySA_27610:HG3_Ill_manta_3402:HG3_PB_pbsv_14809:HG3_PB_assemblyticsfalcon_8488:HG2_PB_pbsv_15162:HG4_Ill_svaba_18850:HG4_Ill_manta_3537:HG4_Ill_Krunchall_20812:HG4_Ill_GATKHC_24045:HG4_Ill_GATKHCSBGrefine_10396:HG4_Ill_250bpfermikitraw_19852:HG4_Ill_150bpfermikitraw_19131:HG3_Ill_svaba_19011:HG3_Ill_Krunchall_20088:HG3_Ill_GATKHC_23987:HG3_Ill_GATKHCSBGrefine_9952:HG3_Ill_250bpfermikitraw_19570:HG2_Ill_svaba_18857:HG2_Ill_Krunchall_20513:HG2_Ill_GATKHC_24139:HG2_Ill_GATKHCSBGrefine_10064:HG2_Ill_250bpfermikitraw_20172:HG4_PB_HySA_22061;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20172:HG2_Ill_GATKHCSBGrefine_10064:HG2_Ill_GATKHC_24139:HG2_Ill_Krunchall_20513:HG2_Ill_svaba_18857:HG3_Ill_250bpfermikitraw_19570:HG3_Ill_GATKHCSBGrefine_9952:HG3_Ill_GATKHC_23987:HG3_Ill_Krunchall_20088:HG3_Ill_svaba_19011:HG4_Ill_150bpfermikitraw_19131:HG4_Ill_250bpfermikitraw_19852:HG4_Ill_GATKHCSBGrefine_10396:HG4_Ill_GATKHC_24045:HG4_Ill_Krunchall_20812:HG4_Ill_manta_3537:HG4_Ill_svaba_18850;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0681818;ClusterMaxEditDist=0.298343;PBcalls=5;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=84;DistBack=4;DistForward=40;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=88;REFWIDENED=14:105481719-105481806;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1772.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:./.:8:15:11:11:1|0:0:19:6:0:0/1:12:17:./.:.:.:.:.:.
chr14	105562399	HG4_Ill_SVrefine2DISCOVARDovetail_10691	G	GGCCCTTCTCAAGGGTGTGAGATCAATTTGGCCGAGAAGGGCGCCCTGAACGTCAGGCTGCTTGTCAGGAAGCGCTGCCAGGCCCAGTGAGATGCGGAGATTCGGTTGCGAACACCCGGCCTGAGCCTCGGAGCAGCACTCCAGGGTGAGCGAGGGCTGTCCCGGAGGAGGACAAATTACACCTTTTCCCCAGTTCCCTCACAACAGGACCATGCCTAGTCCTTGAGGAATCGGGGGAGGGATGTAATTTGTCCTCCTCCAGGACAGCCCTCGCTCACCCTGGAGTGCTGCTCCGCGGCTCAGGCCGGGTGTTCGCAACCGAATCTCCGCATCTCACTGGGCCTGGCAGCGCTTCCTGACAAGCAGCCTGACGTTCAGGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4593:HG3_PB_pbsv_14814:HG4_PB_pbsv_15088:HG3_PB_HySA_22808:HG2_PB_pbsv_15166:HG3_PB_assemblyticsfalcon_8493:HG4_PB_SVrefine2PBcRDovetail_7532:HG4_Ill_SVrefine2DISCOVARDovetail_10691:HG4_Ill_MetaSV_1614:HG4_Ill_GATKHCSBGrefine_10398:HG3_PB_SVrefine2PBcRDovetail_7108:HG3_Ill_SVrefine2DISCOVARDovetail_10859:HG3_Ill_MetaSV_1667:HG3_Ill_GATKHCSBGrefine_9955:HG2_PB_SVrefine2PBcRplusDovetail_3429:HG2_PB_SVrefine2PB10Xhap12_10949:HG2_PB_SVrefine2Falcon2Bionano_7535:HG2_PB_SVrefine2Falcon1plusDovetail_3679:HG2_Ill_manta_4171:HG2_Ill_SVrefine2DISCOVARplusDovetail_4078:HG2_Ill_MetaSV_1544:HG2_Ill_GATKHCSBGrefine_10066:HG3_PB_SVrefine2Falcon1Dovetail_9196:HG4_PB_HySA_22063:HG2_PB_PB10Xdip_9428;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10066:HG2_Ill_MetaSV_1544:HG2_Ill_SVrefine2DISCOVARplusDovetail_4078:HG2_Ill_manta_4171:HG2_PB_SVrefine2Falcon1plusDovetail_3679:HG2_PB_SVrefine2Falcon2Bionano_7535:HG2_PB_SVrefine2PB10Xhap12_10949:HG2_PB_SVrefine2PBcRplusDovetail_3429:HG3_Ill_GATKHCSBGrefine_9955:HG3_Ill_MetaSV_1667:HG3_Ill_SVrefine2DISCOVARDovetail_10859:HG3_PB_SVrefine2PBcRDovetail_7108:HG4_Ill_GATKHCSBGrefine_10398:HG4_Ill_MetaSV_1614:HG4_Ill_SVrefine2DISCOVARDovetail_10691:HG4_PB_SVrefine2PBcRDovetail_7532;NumExactMatchSVs=16;ClusterMaxShiftDist=0.110398;ClusterMaxSizeDiff=0.110398;ClusterMaxEditDist=0.194199;PBcalls=14;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=380;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=14:105562400-105562408;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1773.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:76:1/1:1:35:1:31:./.:1:13:0:6:1/1:0:27:1/1:2:38:.:.:.
chr14	105905492	HG3_Ill_scalpel_14524	C	CCCACCCCTGAGGTGTCTGCGTGGCTGGAAGCTCCCTCCCTGGTCACTCAGGCAGCCCTGAAGGGCTGTGAGCTCTGCCCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10508:HG4_PB_HySA_22074:HG3_PB_HySA_22823:HG2_PB_HySA_27628:HG4_Ill_svaba_18860:HG3_Ill_svaba_19021:HG2_Ill_svaba_18869:HG4_Ill_scalpel_13908:HG4_Ill_manta_3538:HG4_Ill_Krunchall_20820:HG4_Ill_GATKHC_24052:HG4_Ill_Cortex_1135:HG4_Ill_250bpfermikitraw_19860:HG4_Ill_150bpfermikitraw_19137:HG3_Ill_scalpel_14524:HG3_Ill_Krunchall_20095:HG3_Ill_GATKHC_23996:HG3_Ill_Cortex_1181:HG3_Ill_150bpfermikitraw_19035:HG2_Ill_scalpel_14279:HG2_Ill_manta_4172:HG2_Ill_Krunchall_20518:HG2_Ill_GATKHC_24144:HG2_Ill_Cortex_2759:HG2_Ill_250bpfermikitraw_20180:HG2_Ill_150bpfermikitraw_19016:HG2_PB_assemblyticsfalcon_8524:HG2_PB_PB10Xdip_9436:HG4_PB_SVrefine2PBcRDovetail_7537:HG2_PB_pbsv_15176:HG4_PB_SVrefine2Falcon1Dovetail_9245:HG4_Ill_SVrefine2DISCOVARDovetail_10697:HG3_PB_SVrefine2PBcRDovetail_7114:HG3_PB_SVrefine2Falcon1Dovetail_9199:HG3_Ill_SVrefine2DISCOVARDovetail_10865:HG2_PB_SVrefine2PBcRplusDovetail_3437:HG2_PB_SVrefine2PB10Xhap12_10955:HG2_PB_SVrefine2Falcon2Bionano_7543:HG2_Ill_SVrefine2DISCOVARplusDovetail_4080;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19016:HG2_Ill_250bpfermikitraw_20180:HG2_Ill_Cortex_2759:HG2_Ill_GATKHC_24144:HG2_Ill_Krunchall_20518:HG2_Ill_manta_4172:HG2_Ill_scalpel_14279:HG3_Ill_150bpfermikitraw_19035:HG3_Ill_Cortex_1181:HG3_Ill_GATKHC_23996:HG3_Ill_Krunchall_20095:HG3_Ill_scalpel_14524:HG4_Ill_150bpfermikitraw_19137:HG4_Ill_250bpfermikitraw_19860:HG4_Ill_Cortex_1135:HG4_Ill_GATKHC_24052:HG4_Ill_Krunchall_20820:HG4_Ill_manta_3538:HG4_Ill_scalpel_13908;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0969697;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.239521;PBcalls=13;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=80;DistBack=7;DistForward=135;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=169;REFWIDENED=14:105905461-105905629;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:54:1/1:4:44:1:5:./.:0:11:0:2:1/1:1:54:./.:.:.:.:.:.
chr14	105968621	HG3_PB_SVrefine2Falcon1Dovetail_9203	A	GCAGCCTCCATCTTCCGGGATCAAGTCATCCTCCCACCTCAGCCTCCTGAGTGGCTGGGACTGCAGCCTCCATCTTCCGGGATCAAGTCATCCTCCCACCTCAGCCTCCTGAGTGGCTGGGACTGCAGCCTCGATCTTCCGGGATCAAGTCATCCTCCCACCTCAGCCTCCTGAGTGGCTGGGACTGCAGCCTCGATCTTCCGGGATCAAGTCATCCTCCCACCTCAGCCTCCTGAGTGGCTGGGACTG	10	PASS	ClusterIDs=HG2_PB_pbsv_15182:HG3_PB_assemblyticsfalcon_8508:HG3_PB_SVrefine2Falcon1Dovetail_9203:HG3_PB_pbsv_14832;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9203;NumExactMatchSVs=1;ClusterMaxShiftDist=0.083004;ClusterMaxSizeDiff=0.055336;ClusterMaxEditDist=0.209486;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=248;DistBack=-1;DistForward=1899;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=189;REFWIDENED=14:105968432-105968620;PctSeqSimilarity=0.9895;PctSizeSimilarity=0.996;PctRecOverlap=0.8514;SizeDiff=1;StartDistance=36;EndDistance=36;GTMatch=0;TruScore=94;MatchId=1775.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:0|1:26:3:0:24:./.:1:3:9:0:0/1:21:6:./.:.:.:.:.:.
chr14	105987019	HG4_PB_SVrefine2Falcon1Dovetail_9249	T	TTGGGTGTGAAAGGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGTGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGCTCTGGTGGGTGTGAAAGGGGGTGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGTGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGGTTTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGGTTTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGGTTTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGGTTTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGGTTTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGTACTGGCTCTGGGTGGGTGTGAAAGGGGGTCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCGAATGTACTGGCTCTGGGTGGGTGTGAAAGGGGGTCGAATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10959:HG4_PB_SVrefine2Falcon1Dovetail_9249:HG3_PB_pbsv_14833:HG4_PB_pbsv_15104:HG3_PB_SVrefine2Falcon1Dovetail_9204;NumClusterSVs=5;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_9249;NumExactMatchSVs=1;ClusterMaxShiftDist=0.201447;ClusterMaxSizeDiff=0.200868;ClusterMaxEditDist=0.286574;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1842;DistBack=16497;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=769;REFWIDENED=14:105987020-105987788;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9984;PctRecOverlap=0.7946;SizeDiff=-3;StartDistance=-378;EndDistance=-378;GTMatch=0;TruScore=92;MatchId=1776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:25:0|1:23:3:2:15:./.:1:3:0:0:./.:0:1:0/1:44:18:.:23241:.
chr15	22806432	HG2_PB_pbsv_15259	A	AAAAAAAAAGAGAGACCAGTTTCACCGCGTTGCCCAGGCCAGTCTGGAACTCGGAGGCTGTGCAGGAAGAACCACCGAAACCCCAGGAGGCGGAGGCCCGACAAGCCCGAGACTCGCCACTGCACTCACCAGCCTGGGCAACAATGAGCGAATCTCCACCTC	20	PASS	ClusterIDs=HG2_PB_pbsv_15259:HG2_10X_SVrefine210Xhap12_10535:HG2_Ill_breakscan11_4599;NumClusterSVs=3;ExactMatchIDs=HG2_PB_pbsv_15259;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0664653;ClusterMaxSizeDiff=0.0422961;ClusterMaxEditDist=0.146341;PBcalls=1;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=161;DistBack=37355;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=60;REFWIDENED=15:22806433-22806492;PctSeqSimilarity=0.9607;PctSizeSimilarity=0.9938;PctRecOverlap=0.9755;SizeDiff=-1;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=97;MatchId=1779.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:28:0|1:21:3:4:25:./.:1:16:23:0:0/1:10:6:./.:.:.:.:8908:.
chr15	23707579	HG4_Ill_GATKHCSBGrefine_10441	G	GGAGTCTCGCTCTGTCGCCCAGACTGGAGTGCAGTGGTGCAATCTCGGCTCACCGCATCCTCCGCCTCCCAGGTTTAAGCAATTCTCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTGATTTTTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATCTTGGCCAGGCTGGTCTTGAACTCCTGACCCAGTGATCCACCCACCTCGGCCTCCCAAAGAGCTGGGATTACAGGCATGAGCCACCATGCCTGGCCCTAAATTAACTTTTAATGACACTAATTTAGCATCTTAAGTTTCAAATATCTTTAGCTGAAATAACATTGTCAGTGTTTTCCCAGGATTTTAATAAATTAAATGTCACTTGTTTTCTTTTTTTTTTTTTTAAGATA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7145:HG3_PB_HySA_22870:HG2_PB_pbsv_15268:HG3_PB_pbsv_14914:HG4_PB_pbsv_15176:HG2_PB_PB10Xdip_10462:HG2_PB_HySA_27687:HG4_Ill_MetaSV_1632:HG4_Ill_GATKHCSBGrefine_10441:HG3_Ill_MetaSV_1689:HG3_Ill_GATKHCSBGrefine_9999:HG2_Ill_MetaSV_1564:HG2_Ill_GATKHCSBGrefine_10100:HG4_PB_HySA_22126:HG4_PB_SVrefine2PBcRDovetail_7574:HG2_PB_SVrefine2Falcon1plusDovetail_3716:HG4_Ill_SVrefine2DISCOVARDovetail_10723:HG3_Ill_SVrefine2DISCOVARDovetail_10892:HG2_PB_SVrefine2PBcRplusDovetail_3478:HG2_PB_SVrefine2PB10Xhap12_11013:HG2_Ill_SVrefine2DISCOVARplusDovetail_4108:HG2_10X_SVrefine210Xhap12_10537:HG4_PB_SVrefine2Falcon1Dovetail_9285:HG3_PB_SVrefine2Falcon1Dovetail_9245;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10100:HG2_Ill_MetaSV_1564:HG3_Ill_GATKHCSBGrefine_9999:HG3_Ill_MetaSV_1689:HG4_Ill_GATKHCSBGrefine_10441:HG4_Ill_MetaSV_1632;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0597372;ClusterMaxSizeDiff=0.0597372;ClusterMaxEditDist=0.197647;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=413;DistBack=-270;DistForward=22342;DistMin=-270;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7240;REFWIDENED=15:23707566-23697763;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1780.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:./.:0:3:1:8:./.:0:4:0:6:1/1:1:26:1/1:3:76:.:.:.
chr15	23743561	HG2_PB_SVrefine2PB10Xhap12_11014	C	CAGGCATTGTTTCTTTATGAGGAATTAGCTATGCTGCAGGCATTGTTTCTATATGAGGAGTTATCTATGTTGCAGGCATTGTTTCTATATGAGGAATAAGCTATGCTGCAGGCATTGTTTCTTTATGAGGGGTTAGCTATGCTGCAGGCATTGTTTCTATACGAGGAGTTATCTATGTTGCAGGCATTGTTTCTATATGAGGAATAAGCTATGCTGCAGGCATTGTTTCTTTATGAGGGATTAGCTATGCTGCAGGCATTGTTTCTATATGAGGGGTTAGCTATGCTGCAGGCATTGTTTCTATATGAGGAATTAGCTATGCTGCAGGCATTGTTCCTTTATGAGGGGTTAGCTATGCTGCAGGCATTGTTTCTATATGAGGGGTTAGCTATGCTGCAGGCATTGTTTCTTTATGAGGGGCTAGCTATACTGCATGCATTGTTTCTATATGAGGAATTAGCTATGCTGCAGGCATTTTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACAACGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTATTCAGAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGGTTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGCTCACGTCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAATACCACATATTCTCACACATAGGTGGGAATTGAACAATA	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_10724:HG4_PB_pbsv_15177:HG2_PB_assemblyticsfalcon_8578:HG3_PB_assemblyticsfalcon_8555:HG3_PB_pbsv_14915:HG2_PB_SVrefine2Falcon1plusDovetail_3717:HG3_PB_SVrefine2Falcon1Dovetail_9246:HG4_PB_SVrefine2Falcon1Dovetail_9286:HG3_PB_HySA_22871:HG2_PB_HySA_27689:HG4_PB_HySA_22127:HG2_PB_PB10Xdip_10464:HG2_PB_PB10Xdip_10463:HG2_PB_pbsv_15269:HG3_PB_SVrefine2PBcRDovetail_7146:HG4_PB_SVrefine2PBcRDovetail_7575:HG2_PB_SVrefine2PBcRplusDovetail_3479:HG2_PB_SVrefine2PB10Xhap12_11014;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11014:HG2_PB_SVrefine2PBcRplusDovetail_3479:HG4_PB_SVrefine2PBcRDovetail_7575;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0788177;ClusterMaxSizeDiff=0.0788177;ClusterMaxEditDist=0.20957;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=788;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=157;REFWIDENED=15:23743562-23743718;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:76:1/1:1:11:0:16:1/1:0:36:2:43:1/1:0:34:1/1:5:171:.:.:.
chr15	25012281	HG2_PB_SVrefine2PB10Xhap12_11020	A	ATATATATATTTATATATGTTTATATATTTATATATATTTACATATATTTATATATTTACATATATTTATATATTTATATATATTTACATATATATTTATATATATTTATATATATTTATATATATTTACATATATATTTATATATATTTATATATTTATATATATTTACATATATATATTTATATATATTTACATATATATATTTATATATATTTACATATATATATTTATATATATTTACATATATATATTTATATATATTTACATATATATATTTATATATATTTACATATATTTACATATATATATTTACATATATATATTTACATATATATTTATGTATATTTATATATATTTATGTATATTTATATATTTATATATATTTACATATATTTATATATATTTACATATATTTATATATATTTACATATATTTATATATATATTTACATATATTTATATATATTTATATATATTTATATATATTTATATATATATTTATATATATATTTATATATATATATTTATATATTTATATATTTATATATATTTATATATATTTATATATATATTTATATATTTACATATATTTACATATATTTATATATTTATATATATTATATATATTTATATATATATCATATATATTATATATATTTATATATTTATATATATTATATATATTTATATATATTTATATATATTATATATATTTATATATTATATATATTTATATATATTTATATATATTATATATATTTATATATTATATATATATTATATATATTTATATATTATATATATTTATATATATTATATATATTCATATGTATTTATATATAATATATATTTATATATTTATATATGTATTTATATATTATATATTTATATGTTTATATATATTATATATATTTATATATTTATATATTTATATAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9289:HG2_PB_HySA_27726:HG2_PB_HySA_27727:HG2_PB_pbsv_15278:HG2_PB_SVrefine2Falcon1plusDovetail_3723:HG4_PB_SVrefine2PBcRDovetail_7582:HG3_PB_SVrefine2Falcon1Dovetail_9250:HG3_PB_SVrefine2Falcon1Dovetail_9249:HG2_PB_SVrefine2PBcRplusDovetail_3484:HG3_PB_pbsv_14924:HG2_PB_SVrefine2PB10Xhap12_11020:HG3_PB_SVrefine2PBcRDovetail_7152;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11020;NumExactMatchSVs=1;ClusterMaxShiftDist=0.166754;ClusterMaxSizeDiff=0.159458;ClusterMaxEditDist=0.266528;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=935;DistBack=3833;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=478;REFWIDENED=15:25012284-25012761;PctSeqSimilarity=0.9714;PctSizeSimilarity=0.9957;PctRecOverlap=0.6187;SizeDiff=-4;StartDistance=-356;EndDistance=-356;GTMatch=1;TruScore=86;MatchId=1782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:./.:2:37:0:1:./.:0:0:0:0:0/1:3:8:0/1:17:78:.:964:.
chr15	25137670	HG2_PB_SVrefine2PBcRplusDovetail_3486	G	GGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCTATCTCTACTAAAAATACAAAAATTAGTTGGGTGTGGTGGATCACTTGAT	20	PASS	ClusterIDs=HG2_PB_HySA_27731:HG2_PB_assemblyticsPBcR_8309:HG3_PB_assemblyticsfalcon_8571:HG4_PB_pbsv_15191:HG2_PB_HySA_27732:HG4_PB_SVrefine2PBcRDovetail_7583:HG4_Ill_SVrefine2DISCOVARDovetail_10733:HG4_Ill_GATKHC_24177:HG4_Ill_GATKHCSBGrefine_10454:HG4_Ill_250bpfermikitraw_19943:HG2_PB_SVrefine2PBcRplusDovetail_3486:HG2_PB_SVrefine2PB10Xhap12_11022:HG2_PB_SVrefine2Falcon1plusDovetail_3724:HG2_Ill_SVrefine2DISCOVARplusDovetail_4117:HG2_Ill_GATKHC_24264:HG2_Ill_GATKHCSBGrefine_10115:HG2_Ill_250bpfermikitraw_20253:HG2_PB_PB10Xdip_10506:HG2_PB_PB10Xdip_10507:HG4_PB_HySA_22156;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20253:HG2_Ill_GATKHCSBGrefine_10115:HG2_Ill_GATKHC_24264:HG2_Ill_SVrefine2DISCOVARplusDovetail_4117:HG2_PB_SVrefine2Falcon1plusDovetail_3724:HG2_PB_SVrefine2PB10Xhap12_11022:HG2_PB_SVrefine2PBcRplusDovetail_3486:HG4_Ill_250bpfermikitraw_19943:HG4_Ill_GATKHCSBGrefine_10454:HG4_Ill_GATKHC_24177:HG4_Ill_SVrefine2DISCOVARDovetail_10733;NumExactMatchSVs=11;ClusterMaxShiftDist=0.124294;ClusterMaxSizeDiff=0.124294;ClusterMaxEditDist=0.222222;PBcalls=12;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=91;DistBack=9674;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=15:25137650-25137751;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:23:./.:8:20:10:1:./.:2:12:8:0:0/1:13:11:./.:.:.:.:.:.
chr15	25565737	HG2_Ill_GATKHCSBGrefine_10116	T	TAAGAAACTGCTAGTGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_27738:HG2_PB_pbsv_15284:HG2_PB_PB10Xdip_10508:HG2_PB_HySA_27739:HG4_PB_pbsv_15192:HG2_PB_assemblyticsPBcR_8311:HG2_PB_SVrefine2PB10Xhap12_11023:HG4_PB_SVrefine2Falcon1Dovetail_9291:HG4_Ill_MetaSV_1633:HG2_Ill_GATKHCSBGrefine_10116:HG2_Ill_MetaSV_1568:HG2_PB_SVrefine2Falcon1plusDovetail_3725:HG2_PB_SVrefine2PBcRplusDovetail_3487:HG2_Ill_breakscan11_4600;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10116:HG4_Ill_MetaSV_1633;NumExactMatchSVs=2;ClusterMaxShiftDist=0.150235;ClusterMaxSizeDiff=0.150235;ClusterMaxEditDist=0.228482;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=323;DistBack=30164;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=15:25565738-25565754;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:47:0|1:24:1:0:28:./.:0:3:18:0:0/1:19:6:0/1:10:23:.:.:.
chr15	25612311	HG2_PB_SVrefine2Falcon1plusDovetail_3726	T	TATATTTACATATTTGTAAATATGTAAATATTTACATATTTGTAAATATGTAA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_20258:HG2_PB_HySA_27741:HG3_PB_SVrefine2Falcon1Dovetail_9252:HG3_PB_pbsv_14931:HG2_PB_SVrefine2Falcon1plusDovetail_3726:HG2_Ill_GATKHC_24271:HG2_Ill_GATKHCSBGrefine_10117;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20258:HG3_PB_SVrefine2Falcon1Dovetail_9252:HG2_PB_SVrefine2Falcon1plusDovetail_3726:HG2_Ill_GATKHC_24271:HG2_Ill_GATKHCSBGrefine_10117;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0761905;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.247619;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=118;REFWIDENED=15:25612312-25612429;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:35:1|0:8:29:26:3:./.:9:0:5:4:0/1:34:21:./.:.:.:.:.:.
chr15	25735665	HG3_PB_pbsv_14934	T	TTTAGGCTGCCGCGGTTTGGCTCACGCCGTAATCCCAGCACTTTGGGAGGCCGAGGTGGCGATCACGAGGTCAGGAGAATCGAGACCATCCTGGCCAACAATGGTGAAACCCCGTTTCTCTACCTAAAAATACCAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCTGTAAGTCCCAGCTACGCGGGAAGGCGAGGCAGGAGAATGGCCGTGAACCCGGGAAGGCGGAGCTTGCAGTGAGCTGAATCGCGCCAGCCGCTAACTCCAGCCTGGTCTGCGACAGAGTGAGACTCCGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGATACAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4601:HG2_PB_pbsv_15288:HG4_PB_pbsv_15194:HG3_PB_pbsv_14934:HG2_PB_SVrefine2PB10Xhap12_11025:HG3_PB_SVrefine2PBcRDovetail_7155:HG2_Ill_SVrefine2DISCOVARplusDovetail_4120:HG4_Ill_MetaSV_1634:HG4_PB_SVrefine2Falcon1Dovetail_9292:HG2_PB_HySA_27744:HG3_PB_HySA_22916:HG4_PB_HySA_22161;NumClusterSVs=12;ExactMatchIDs=HG3_PB_pbsv_14934;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0860215;ClusterMaxSizeDiff=0.0829493;ClusterMaxEditDist=0.172363;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=333;DistBack=-4;DistForward=1;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=15:25735654-25735669;PctSeqSimilarity=0.959;PctSizeSimilarity=0.973;PctRecOverlap=0.952;SizeDiff=9;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=96;MatchId=1786.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:46:./.:13:15:3:12:./.:24:0:1:12:0/1:22:7:0/1:12:23:.:.:.
chr15	26060659	HG2_10X_SVrefine210Xhap12_10550	T	TGATCCTCAATAAACTCTGTTCTCGGAGCTGAAAAAAAGGAGACGTATGAAAAAGACAGTTATGAAAATCTCCATGCATAGCTTGTTGTACACCTCAGACAGCACTGGACTCCACGGGCTCCGGGCCCCCCTGGGGCCAAACTGCTCTGCAGCCACACAGTGCCTCCCATCACCGGAGCTCCAGTACCCATACACCCCAGCGGCATCTCAGTGTGGACACGCCCTTCTTCCGGCCCCTCAATTCCCTCAGCCCTTCCCACCAGCTCTTCCTTACTTTCCATGCCGGTAAAGACGAGGCAAACAGAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4602:HG4_PB_SVrefine2Falcon1Dovetail_9297:HG3_PB_pbsv_14938:HG2_PB_pbsv_15292:HG4_PB_pbsv_15199:HG4_Ill_Spiral_1181:HG3_Ill_Spiral_15737:HG2_Ill_Spiral_1008:HG3_PB_assemblyticsfalcon_8582:HG2_PB_assemblyticsPBcR_8320:HG3_PB_SVrefine2Falcon1Dovetail_9256:HG4_PB_SVrefine2PBcRDovetail_7586:HG4_Ill_SVrefine2DISCOVARDovetail_10736:HG4_Ill_MetaSV_1635:HG4_Ill_GATKHCSBGrefine_10457:HG3_PB_SVrefine2PBcRDovetail_7158:HG3_Ill_SVrefine2DISCOVARDovetail_10902:HG3_Ill_MetaSV_1698:HG3_Ill_GATKHCSBGrefine_10014:HG2_PB_SVrefine2PBcRplusDovetail_3492:HG2_PB_SVrefine2PB10Xhap12_11032:HG2_Ill_SVrefine2DISCOVARplusDovetail_4122:HG2_Ill_MetaSV_1570:HG2_Ill_GATKHCSBGrefine_10121:HG2_10X_SVrefine210Xhap12_10550:HG2_PB_SVrefine2Falcon1plusDovetail_3731:HG2_PB_PB10Xdip_10537:HG2_PB_PB10Xdip_10536;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10550:HG2_Ill_GATKHCSBGrefine_10121:HG2_Ill_MetaSV_1570:HG2_Ill_SVrefine2DISCOVARplusDovetail_4122:HG2_PB_SVrefine2PB10Xhap12_11032:HG2_PB_SVrefine2PBcRplusDovetail_3492:HG3_Ill_GATKHCSBGrefine_10014:HG3_Ill_MetaSV_1698:HG3_Ill_SVrefine2DISCOVARDovetail_10902:HG3_PB_SVrefine2PBcRDovetail_7158:HG4_Ill_GATKHCSBGrefine_10457:HG4_Ill_MetaSV_1635:HG4_Ill_SVrefine2DISCOVARDovetail_10736;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0887199;ClusterMaxSizeDiff=0.0887199;ClusterMaxEditDist=0.198425;PBcalls=14;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=305;DistBack=11090;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=15:26060660-26060662;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:76:1/1:1:23:0:18:1/1:0:10:0:20:1/1:0:20:1/1:2:46:.:.:.
chr15	26141232	HG2_Ill_GATKHCSBGrefine_10123	T	TAGTAATCTAATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGAGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_1636:HG4_PB_HySA_22173:HG2_PB_pbsv_15293:HG2_PB_HySA_27753:HG4_PB_SVrefine2Falcon1Dovetail_9298:HG4_Ill_GATKHCSBGrefine_10459:HG2_PB_SVrefine2Falcon1plusDovetail_3732:HG2_Ill_MetaSV_1571:HG2_Ill_GATKHCSBGrefine_10123;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10123:HG2_Ill_MetaSV_1571:HG2_PB_SVrefine2Falcon1plusDovetail_3732:HG4_Ill_GATKHCSBGrefine_10459;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0512;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.148265;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=306;DistBack=-7;DistForward=-1;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=15:26141233-26141247;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1788.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:26:./.:13:19:28:3:1|0:0:9:14:0:0/1:22:6:1/1:2:21:.:.:.
chr15	26169813	HG2_Ill_MetaSV_1572	A	AAATGTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCTCTTGACCTCGTGATCCCCCCCCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCCCCCCGCCCCGCCC	20	PASS	ClusterIDs=HG3_PB_pbsv_14939:HG2_Ill_MetaSV_1572:HG2_Ill_breakscan11_4603:HG2_PB_HySA_27754:HG2_PB_SVrefine2Falcon1plusDovetail_3733:HG3_Ill_GATKHCSBGrefine_10016:HG2_PB_pbsv_15294;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_MetaSV_1572;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0650406;ClusterMaxSizeDiff=0.0648649;ClusterMaxEditDist=0.15748;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=179;DistBack=-12;DistForward=-1;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=15:26169814-26169825;PctSeqSimilarity=0.9835;PctSizeSimilarity=1;PctRecOverlap=0.9888;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:22:./.:10:7:7:12:0|1:25:0:0:11:0/1:37:12:./.:.:.:.:.:.
chr15	26872512	HG3_Ill_GATKHCSBGrefine_10022	T	TCAAGTTTTATTTATTTATTTATTTATTTATTTATTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_15297:HG4_Ill_MetaSV_1637:HG4_PB_pbsv_15203:HG3_PB_pbsv_14942:HG2_PB_assemblyticsPBcR_8330:HG3_PB_assemblyticsfalcon_8595:HG4_PB_HySA_22182:HG4_Ill_GATKHCSBGrefine_10464:HG3_Ill_MetaSV_1699:HG3_Ill_GATKHCSBGrefine_10022:HG2_Ill_MetaSV_1573:HG2_Ill_GATKHCSBGrefine_10130:HG4_PB_SVrefine2Falcon1Dovetail_9299:HG2_PB_SVrefine2PB10Xhap12_11040:HG2_PB_SVrefine2PBcRplusDovetail_3493:HG2_PB_SVrefine2Falcon1plusDovetail_3734:HG2_PB_PB10Xdip_10545:HG3_PB_SVrefine2Falcon1Dovetail_9258:HG4_PB_SVrefine2PBcRDovetail_7587:HG2_PB_PB10Xdip_10546:HG2_10X_SVrefine210Xhap12_10553:HG2_PB_HySA_27763;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10130:HG2_Ill_MetaSV_1573:HG3_Ill_GATKHCSBGrefine_10022:HG3_Ill_MetaSV_1699:HG4_Ill_GATKHCSBGrefine_10464;NumExactMatchSVs=5;ClusterMaxShiftDist=0.180723;ClusterMaxSizeDiff=0.180723;ClusterMaxEditDist=0.28821;PBcalls=15;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=330;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=15:26872513-26872528;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:67:1/1:3:23:1:29:./.:2:6:0:5:1/1:1:22:1/1:5:83:.:.:.
chr15	27630372	HG3_Ill_SVrefine2DISCOVARDovetail_10911	C	CTCCTTTGTAGAGCTATCACAGGGTTCTCACACTCGGGTCATTATTCAGTACTAATCACCCCAGGGAAACTGGGGACAACCCTGTCCCAGAGCCCAGTGAAATTATTAAAACTGGGAATTATAAACTGTTTATTCTTCTTTGCCTGTTCTTTCCCATGGAAACCACAGTAAAGGGCCTTACCCACATTTTCCTCCTTTCCTCTGACCGCCCAGTGTCATGGTGTGCCCTATTCTCTTAAAAACCATGAGTAGCAGTCTTTTCAGTGACAATCACATCTTGATTTATTGGTCTCGTCATACCTGAATAATAGTAAAACTTGCATTTTTAAACACTTTTGTTTTAGAGACAGTGTCTCGCTCTGTCGCCCAGGCTGGAGTACAGTGGTTTGATCTTGGCTCACTGCAACCTCCACCCCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTGCAGGTATGCACCACCATGCCTGACTAGTTTTTGCATTTTTAGTAGAGATGGAGTTTTGCTATGTTGGCCAGGCTGGTCTCGAACTCCTGGCCTCAGGTGATCCACCGGCCTCAGCCTCCCAGAGTGCTGGGATTACAGGCATGAGCCACTGTGACCGGCCACA	20	PASS	ClusterIDs=HG2_PB_pbsv_15303:HG2_Ill_breakscan11_4605:HG3_PB_pbsv_14949:HG3_PB_SVrefine2Falcon1Dovetail_9263:HG2_PB_PB10Xdip_10552:HG4_PB_SVrefine2Falcon1Dovetail_9304:HG3_PB_SVrefine2PBcRDovetail_7165:HG3_Ill_SVrefine2DISCOVARDovetail_10911:HG3_Ill_MetaSV_1703:HG3_Ill_GATKHCSBGrefine_10031:HG2_Ill_MetaSV_1577:HG2_10X_SVrefine210Xhap12_10559:HG2_PB_SVrefine2Falcon1plusDovetail_3738:HG2_PB_SVrefine2PB10Xhap12_11044;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10559:HG2_Ill_MetaSV_1577:HG3_Ill_GATKHCSBGrefine_10031:HG3_Ill_MetaSV_1703:HG3_Ill_SVrefine2DISCOVARDovetail_10911:HG3_PB_SVrefine2PBcRDovetail_7165;NumExactMatchSVs=6;ClusterMaxShiftDist=0.163501;ClusterMaxSizeDiff=0.163501;ClusterMaxEditDist=0.212871;PBcalls=8;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=627;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=15:27630373-27630373;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1791.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:27:0|1:21:3:1:19:0|1:16:0:0:21:0/1:23:9:0/1:13:67:.:.:.
chr15	28094012	HG4_Ill_250bpfermikitraw_19981	T	TTGAACACAGCCACGTGTGGCCTGGATTGGTGTGAACACAGCCACATGCTGCCTGGATTGGTGTGAACACAGCCACGTGCTGCCTGGGTTGGTGTGAACACAGCCATGTGCTGCCTGGATTGGTGTGAACACAGCCACGTGCTGCCTGGGTTTGTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9307:HG3_PB_pbsv_14955:HG2_PB_pbsv_15308:HG4_PB_HySA_22199:HG4_PB_pbsv_15213:HG4_PB_SVrefine2PBcRDovetail_7591:HG4_Ill_250bpfermikitraw_19981;NumClusterSVs=7;ExactMatchIDs=HG4_Ill_250bpfermikitraw_19981:HG4_PB_SVrefine2PBcRDovetail_7591;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0928793;ClusterMaxSizeDiff=0.0804954;ClusterMaxEditDist=0.245399;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=155;DistBack=24263;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=431;REFWIDENED=15:28094013-28094443;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1792.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:33:./.:18:7:7:15:./.:1:12:2:0:0/1:14:15:./.:.:.:.:.:.
chr15	28212946	HG2_PB_SVrefine2PBcRplusDovetail_3499	T	TGTCCTGGAATAAGTCAGCGGCGTCATTGGTTGGTTCTGTTCTTTCACACACAAACGTCCTGGAATAAGTCAGCAGCATCATTGGTTGGTTCTGTTCTTTCACTGAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3741:HG3_PB_SVrefine2Falcon1Dovetail_9269:HG2_PB_SVrefine2PBcRplusDovetail_3499:HG2_PB_SVrefine2PB10Xhap12_11046;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3741:HG3_PB_SVrefine2Falcon1Dovetail_9269:HG2_PB_SVrefine2PBcRplusDovetail_3499:HG2_PB_SVrefine2PB10Xhap12_11046;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=106;DistBack=37155;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=355;REFWIDENED=15:28212947-28213301;PctSeqSimilarity=0.978;PctSizeSimilarity=0.9623;PctRecOverlap=0.2617;SizeDiff=4;StartDistance=-77;EndDistance=-77;GTMatch=0;TruScore=73;MatchId=1793.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:32:./.:4:1:3:3:./.:5:0:3:1:0/0:24:0:./.:.:.:.:.:.
chr15	29821418	HG2_PB_PB10Xdip_10577	A	GGGCGTGGAGGGGTGTGTGAGGGTGTGGAGGGGTGGGGGCGTGGAGGGGTGTGGGGGGCGTGGAGGGATGTGGGGGGGCGTGGAGGGGTGTGGGAGGCGTGGAGGGGAGTGGGGGGGAGTGGAGGGGCATGTGGGGGCATGGGGGACGTGGGAGGCATGGAGGGGTGTGGGGGGGCGTGGAGGGGTGTGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9314:HG3_PB_pbsv_14962:HG4_PB_pbsv_15218:HG2_PB_HySA_27799:HG2_PB_PB10Xdip_10578:HG2_PB_PB10Xdip_10577:HG2_PB_pbsv_15315:HG4_PB_SVrefine2PBcRDovetail_7596:HG2_PB_SVrefine2PBcRplusDovetail_3504:HG2_PB_SVrefine2PB10Xhap12_11054:HG2_PB_SVrefine2Falcon2Bionano_7564:HG3_PB_SVrefine2Falcon1Dovetail_9275;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_10577:HG2_PB_PB10Xdip_10578;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0771208;ClusterMaxSizeDiff=0.0565553;ClusterMaxEditDist=0.210256;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=189;DistBack=-57;DistForward=3;DistMin=-57;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=67;REFWIDENED=15:29821409-29821475;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9947;PctRecOverlap=0.9895;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1794.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:1:32:2:34:./.:3:9:11:23:0/1:5:11:./.:.:.:.:.:.
chr15	29853207	HG4_Ill_SVrefine2DISCOVARDovetail_10750	C	CACAGAAGACCATGTGACCACAAAGCCTAAACACTGACTCTTCTGTATAGAAACGTTGGTCCATCTCTGGTCTACACATTTTCCTCCCCCAGTGCTATCTTATGGCTCCTCCATCATGGTGGAAGACATGGAAGGCAAGGGACAGATGGCCAATGTCCAGTCCTCATTCATTCAATCATGTGGAGTAGTACAGGGTGCTACGGTGCTATGTCCCTTCTTAGGGACCCAAGAAGCTTCTTCACTTCTAAATCTCTCCACCTGCTCAGAGTCCTTCCTCCCAGACTCACATGGCTTTCTCCTTCCCCTTCCTTTCCACTCCCCGGTGGAGGGGAACTTCTCTCCCATCATCTCCTCCATCCTACCACCAATAAAACCATTTTCAGGCCTCCCAGCTTTGCTCTCAGTATATAAAAGAAAGCTTCTGGAATATGATTCTTTTTCTCTTGCCACAAAGCCTAGTTTTCATGACTGTAGTCCCTCTTGAGACTGAAGAAAGTCAGTGCCAGGACTCAAAGCTGAGTAATGAGCTTTTTGTTCTACATAGTACTTGCTCTTCCCCCAAAGAAAAGAACACCCTTGATTTAATGGGTGGGAGAGCTGCAGGGTAATATGATTTACAAGAAAGAAAAAAAAATGGGTCAATTTAAATTTTCAGAGCTATTATTCTTGCAAGAACTAGAGTGAGGTCCAAAAAGTTTCCACCAGTCTATGGAAAGAGAGATACAGCATGAAACTTGGAAAACTGGGTCAGAACTCAAGAAAGAGCTAGCTGGAGATGAGCCCTGCTAATCAGTCTCTGAGACTGTGAGCTGCTCCCTTGGAGTTCTCCTGCTGATGGAGTTCATTTGGGTGGAAGAGGAGAGAAAGACGGCCATTGAGAGTTATGAATAAAAGTTAAGATCAGTTACTGGCAGAGGAAACAGAGAGAAGAGTCTCAACTCAGCACATGAAGGAGAGAGGCTTTAGAGTGATAAGATGAGCTGCACCTAGGAACTCCCAGAGTCTACAAGTTCCAACAGCTAAAGCAAAAAATGGGATAAAAAACCAGGTGACAAAAGGCTACCTGCAGAAATACAGATGAACCCTGGGCCTCCAGACCCCTATGTCTCACGCCAGCACTTACAGCACTAGTATCATTCTCAGGCAGAGGAAAAAAGAACGCTGCACTCCCCAAAGAAATGAGCCATCGGCCTCTTCTGCTTTCAAACTGGGAAGTCATGCCCCCCAGAGCAGACACTCTTCATATTAGCTAAGAAATGGCAGGAGGGGCAGCTCATCTATGCCCAGCCCAAGCATCCAAAGGTGAGGCCGCCAGCTGACATGCTCTGCCCACATCCAGACAGAGCTAGGCCACACCCTCATTTGATGGGGAGGTCAGGGACATAGAAGAAAACATGCCAAGCACCTTTAATCAACCCTATAAACATCAAAGGACAACCAAGGGCCACCAGACTGTTAAGGAAAACCAAAACTAGCAAAGACAAAGATTTAGAGCAATACACAGAAAAACTGACTCTGGAGCAAACTAGAAAACTTATCTTACTTAATTCCAATTAGTACCCTCAGGTAGAAATGAAAAAAATATGCAACCAAAAGATAAGACAAATACTAAGAAAAAGTAGCAGGAAATATAAATGAGAATAAAAAATGTATAAAATAACAAGTTAATCTCACCTGTTCTGTTGCAACCCTGTGCTAGGTTTCCAGAAGGCTTAGAACTGCCACTCAGATCTTCAGCCAAACCAGGATGAAATGTAACAACTAGCAACTAATGTCAACCCATGCTTGGGTCCAAGACTGACCAGGGAGCAAACTGCACAGTCAGATTGTTTATACAAAATGTTCAGCATAATGATCTGCACCTGGTTCTCTGATTTTGTTACTGAACTCGTCATGCATCCTGGTTCTAGATACCTGACCAAAAGGGTAGGAAAGACTCCTCCTCCGATAAGCCTGTTGCTCCCAAGGCCAAGCGTCTCTCCAGTATCTTAATGATTCACAATCTGAAGACAAAGTGCATCCTGTGTGACAGAGAAAGGCCTCTGGGAGCAGCACATGGGTGGGCTGGACCTCTCTAGTACTGCCCTGTGTGACCTTCCTCCTCCTGCCCTGCACCATTTCCCTTTCTGAAAGCCTTAGGGTCAGGCAAAGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGAGGTGGGAGGGTTGCTTGAGGCCAGGAGTTTGAGACCAGCCTGGTCAACACAGAAAAAAACCCATCTCTACAAAAAAATTAAAAATTAGCTGGGCATGCTCCTGAGTGCCTGTAGTCCCAGCTACTCGGGAAGATCGCTTGAGCCTAGGAGTCTGAAGCTATAGTGAAATGTGATCATACCACTGCACTCCAGCCTGGGTGACACAGCGAGACCCCAACTCTTAAAAAAAAGAAAGCCTTACCCAAGTATACCCTGGGGAGTCTCAGAGTCCTTCCAACTGTCCAACCCTGTGTCACTGATGTACTTAATGGGTACAATGTTCAGTAGTTGGGTGACAGATACCCTAAAAGCCCTGACTTCACCACTATACGATCTGTGCATGCAACAAAATTATACTTCTACCCCATAAATCTATACAACTGAAAGTAAATAAATAAAAATTAAAATTCAATAGGTGGTCCAGAAGATGGAATTAAAGAAATCTCCTGGATTATAAAGCAAAAAGCACAGCAGTGGAAACTGTGACAGAGAAGTTAAGACACCTGGAAGATCAACACAGAAAGTCAGACACCTGGCCAGGCACAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCTGAGGTCAGGAGATCAAGACCATCCTGGCCAACATGGTGAAACTCCATCTCTACTAAAATACAAAAAATTAGCCAGGCATGGTGGTGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATCGCTTGAACCCAGGAGGCAGAGGTTTCAGTGAGCCGAGAGAGATTGTGCCACCGCACTCCAGCCTGGTGACAGAGTGAGACTCTGTCTCAAAAAACAGCAACAACAACAAAAAAGTCAGACACCTAACTAACAGGAGTTCCATAAAAGAGAAACAACAATTGAGGAAATACTCAAGGTACAAAATTTTCAGCATTAAAGAAAGGACACATTGAGTAGCTAAGACCCATCACTAAGTTCTGCAAAATATCAGAAAACCAAGAACAAAGAGTAGACCCTAGCAGCTTCCAGAAAAGCAGGTTAGGTTACCAGCAAAAGAAGATGAACCAGATTAGCATTAGATGCTTCTTCAGTGATGTCGGTTATGAAGACAATGGTGTGCTTGCCACCAAAGAAGTAACAACAGAGGGTTGAAATATTTAACTCTGAGGAATAGGGAGGGCAGGAGCTGAGGAGTAGGTTTTGCCTTTCATTCTGTACCTTTCCATACTGTCTGAATGTTTATTTCCATGAACATATATTGCTGTCATCATCATCATCATCATCATCATCACCATCATAAAGCACACACATATACATGGTTTTATGCACAGATACATACATACATATTTTAATATGTATATGTATGTTTTATGATGGTGATGATGATGCTAACAGTAATATGTGAAAACAATCAGTAATATATGAAAAGAAAAATTAGTTATATATGAAAAAGATAACAGAATATATGAAAACTACATTATATAATATATAACGTACATTATATATAATATACATTACTATATATATATATACACACACACACACACACACAGACACACACATACAGCACTAGTATGCATTCTCAGGCAGAAGAAAAAGAATGCTGCACTCCCCAAAGAAATGAGCCATCGGCCTCTTCTGCTTTCACACTGAGAAGTCATGCCCCAGAGCAGACACTCTTCATATTAGCCCAAGATATGGCAGGGGAGGCAGCTCACCTATGCCCAGCCCAAGCATCCAAAGGAGAGGCCGCCAGCTGACATGCTCTGCCCACATCCACACATTATATATATATATATATATATATATATATGATGCTGACATGCTCTGCCCACATCCACACATCATCACATATATTATATATAATATATATTATATATATTTTTATATAAATTATATATTATAATATATATTATATATAATATATATATAATGTGCTTTCAGTACCAGGGGAGCATGTCACAGCAGGGCTCTTTCTCCACACAGACACAGTGCTTCTCTACCTCCTTAAACTCTCTCAGATGTCACCCCACTCACCAAGAGGCATGCATCTGGGCCACTGGGAGCAACCATAGGTAGAACTTTTGAAGTCACTGGGCAGGTGCCTTGCTCAGGGGGTTCCAAAGGTTTTTGCTTTCTTTTTTATTGTTGTTGTTATTGATGATATGGCAATAAAGCAATAAAGTATCATGAAATGTATATACAATTATATGTATACTTTTTAAACACATTCTCTTTTTTCCAAAGAGAAAGCCAATCTTGAGGAGCAGCTATTGACCATGTTATGACAGACTCACAGCCCTGTTAACCTGCTCACATTTCTTAGGTGTTACTTCCTCTTCTGGAAGAGTCCGCTCTGGGGTGTCTCATACCCTCTCAAGGCACCAAAGACAGGGGCAGGCCCAGAGAGGGGACCTGGGTGTCACCAATGCTGGATTTAATGAATTGGCAGGTGCAAAGCAGATGCTATGTTCCTCTGCTTTTTTCTGACACTGGGTCAGAAATCAGTTTCAAAAAACATAGTATCCCTTTGCAAATGGTAGAAAAGAACTTGGGTATAATTGAAAAAAAATGTGTTTTTTTAAAAAAAATCAAGAGACTGATGAGGATATGCTCATTGTGGCTAAGTTGCTTATTAACATGTTAAGTAGGTATCATTATCATAATCCTTTCAAATTCTGCTGAGGGTTCCAAAAATGTCTTTCAAAATCACTATCCCTATTCACTATCAAAGCCATTATCTATAATTTCTCATTACAGATGAGAAGCCAGCACATCTCTTATAATTAGTTAACTTCGAGGTTTACTTTTCAAATAAAAATTTGCTTTTTCATGAAGTCCCACATGTTCTCTGTTTTCTCTGCAAAAGAGTGAGCTTAAACTTTAAGGATTTATTTTAGAACAAATAACTTGAATGTTTATGTAATAATTATGTCATAGGCTTTAGTAGCTGGGATGCAAAAGAAGTAGTTTGTTTACATTTATTATGCCCTAAATACTAGACTCACCAACACCCCTTCCTCCCCCACAAATGCCAGTGTTTTAACATCCTCCATTCCTGTGGGCTGCCTACATCACCCTCCATCTCACTGTACCATGTCCTTCAGGTAAATCATGACACTTTTATCAGCAGTTGGAAGTGGAGATAAGAGCAGTCCAAGCTTATAAATTGAAACTATAATTCCAAAACATGGTATCAAAAATGGGGACACATTGGTCAAAGTGTGCACATTTTCAGTTAAAAGATGAATCCGTACTGGGTTTCTAAAGTACAGCCTGTCAAGTACAGTTAATAGTATTGTCTTGTATACTTGAAGTCTGTTAAGGGAGTAGATTGTAAATGTTCACACACACACATAGAGGTAACTACGTCAGGTGATGGACACGTTAATTAGCTTGATTGTGGGAATCATTACACAGGTATACTTACATCAAAACACCATACTGTATACCTTAAGAATGACAAATTTTTTATTTGTCAATCATCATACCTCAATAAAACTGAGGAAAGGCCGGGCACAGTGGCTCACACCTGTAATCCCAGTGCTTTGGGAGGCCGAGGTGGGCGGATCACAAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACAAAGATACAAAAATTAACCGAGCATAACGGCACCTAGCTACTTGGGAGGCTGAGATAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCAGAGACCACATCACTGCACTCCAGCTGGGGTGACAGAGTGAAACTCTGTCTCAAAAAAAAAAAAAAAAACTGGGGAAAAAAATTTAAAATGCCTAAATGCAGGAATAGAATTCAGGTAGGCCTGAAGCTCGGGGACGCCGGGGGACAGTGGGCCTGGGAACCGCACCTGCCCTGCACCTGGCCAACACACAGGCAGGCATCTAGCCAGAGCTCCAGAAAAGCTCAGAGAAGCCACTGCATATCCCACCTCTGCCACAAAGGCAGAGTAGGCTTCTCAAAGGCCCTGAGAGGACCCTGTCCCCTCATCAGGCGATTCCCCAGCAGCACCTGCCTATGGGGAACCAAGGAGGGTGAGGTCCTAGGGACTCAGAGGAAGCCATGTTCTAGCCTTTGCTGTCTGTCAACATCCTTCCTTCCATGACTGTCATCCTCAGAAGAGCTCTGTGATGACAAAAAAAAAAAAAAACACGTGGTTTAAACTCACTATCAAACGTGGAAACAACAGAGTTTGAAGAAACCATCCTAGGTTTTATAATTTCTTTACTCTTCAATAAAACTATCGGATACAGTACTTTTGACCTTTTCAAAATTCCAGTTTGAAATTCCCCCAAATAAAAAGGTGAAATACAAAGGAAAAAAAAATCTCTTTCACACACTCAAATTATGTAGACCCCGGTATAATGTTCAAGGTCCGTTTTCTTTTGAAGAATTATTTTTAAATGAACCAGGCCAGGGATTCTTCCTGTGGGGTTACAGAGTAGAAGATGACAAGGGGGGGGGAGGGTGAAAGCATAAAGAAACCATTTGGCTTGAGCAAGGGGGATTGTGATCACAGCTGTCATTTAGTCTGGTATACTAACAGAAAACACAGATTTAAATAGATTGTTAAAGAGGAAAGCGTAACCACTAGAAGAACGGAGACACACAGGAGAGAGTGGTTGGAGTTCATGAATACACATTTTTTAAAAGAAGACACACGAATGGCAAACAGGTGTATGAAAAAATGCTCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4608:HG4_Ill_SVrefine2DISCOVARDovetail_10750:HG2_10X_SVrefine210Xhap12_10566:HG2_PB_SVrefine2Falcon2Bionano_7566:HG2_PB_SVrefine2PB10Xhap12_11056:HG2_PB_SVrefine2PBcRplusDovetail_3505:HG4_PB_SVrefine2Falcon1Dovetail_9316:HG2_PB_PB10Xdip_10586;NumClusterSVs=8;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_10750;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00461994;ClusterMaxSizeDiff=0.00360933;ClusterMaxEditDist=0.0168916;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=6935;DistBack=2301;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=15:29853208-29853210;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:40:0|1:14:0:0:11:1|0:0:8:31:0:0/1:34:21:0/1:139:268:.:8800:.
chr15	33350175	HG2_PB_SVrefine2PB10Xhap12_11067	T	TGAAAAGTATGATGGGGCTGGTGGTGGAAAGGCGTGGCGGGGCTGGTAGTGGAAAGGCGTGGCGGGCTGGTGGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11067:HG2_PB_pbsv_15336:HG2_PB_HySA_27838:HG2_PB_HySA_27839:HG4_Ill_GATKHCSBGrefine_10491:HG2_Ill_GATKHC_24357:HG3_PB_SVrefine2Falcon1Dovetail_9282;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11067:HG3_PB_SVrefine2Falcon1Dovetail_9282;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0794702;ClusterMaxSizeDiff=0.0662252;ClusterMaxEditDist=0.206452;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=9329;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=151;REFWIDENED=15:33350176-33350326;PctSeqSimilarity=0.9826;PctSizeSimilarity=1;PctRecOverlap=0.8533;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=94;MatchId=1796.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:0|1:26:2:1:27:./.:8:14:15:0:0/0:17:0:./.:.:.:.:.:.
chr15	34113099	HG4_PB_SVrefine2Falcon1Dovetail_9327	T	TGTGGCTCGCCCACCAGCAGTGTGTGAGTTGGCAAGTCTGCCTTAATAAAGCACACTCATTAGCTGTGGTTTCTTGTCTCTCTGCCCATGAAAAGTAGCAGGTAGTATGCCAGTCAGCAACACTAGCTTTGTTCTTGTGGGAAATTGTACTCAATTACTGTAATAACAGGGCCATAGAAGGACAAACTGAAACATCTAAATGAAAAAGTCAAAAAATGAAAATCAGGCAAGCGTGGTGCTCACACCTGTAATCCCAGCTTTGGGAGGCCAGGGGAGGAAGATCACTTGAGCTTAGAAGTTCGAGACCAGTCTGGGCAACATAGGGAGACCTACCTCATCTATACAAAAAATAAAAATTAGTTGGTATGGTGTGTGCTCCTGTAGTCCCAGCTGCTCAGGAGCAGTAGGAGGATATTTGAGCCCAAGTATTGAGGCTGCAGTGTTCTGATTGCACCCTGCACTCCAGGCTGGCGACAAGTAAACATCCAGTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGATTAAAAAATCAGAGAATGGGGACACTTGAATGGTTTTTGTGCTATTATTCTATAAATGCAAGTTGATAGTGATTTTTATTTTGAGGCAGTACAGGACCCTGCAATTCTCAAGATTAAACTATATTAGGTTACTTGTACTCTTTTGTAGACAAAGCACATGACAAAACACAGCAGAAGTAAATGACTATAATTACAGTCTGGAAAGCTTTGACATTCTCATAACCCATGTCTGATAGAAGTGTGCGGTGCTCACGCCTGTAATCCCAGCACTTTGGGTGGCCAAGGCGGGTGGATCACCTGAAGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCGAAACCCCATCTCTACTAAAAATACAAAATTAGCTGGTTGTGTGGCATACGCCTGTAATCCCAGCTACTGGGAGGCTGAGCAGGAGAATCGCTTGAACTCAGAGCAGACGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCGAGCCTGGCGACAGAACAAGACTCCGTCTCAAAAAAAAATGTGTTAGCTTGTCTGAGCATTCCAGGAAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10623:HG2_PB_pbsv_15338:HG3_PB_pbsv_14981:HG3_PB_HySA_23019:HG4_PB_assemblyticsfalcon_8519:HG4_PB_SVrefine2Falcon1Dovetail_9327:HG2_PB_SVrefine2Falcon2Bionano_7570:HG3_Ill_MetaSV_1713:HG2_Ill_GATKHCSBGrefine_10155:HG2_PB_assemblyticsPBcR_8383:HG3_PB_SVrefine2PBcRDovetail_7179:HG2_PB_assemblyticsfalcon_8667:HG3_Ill_SVrefine2DISCOVARDovetail_10930:HG2_PB_SVrefine2PBcRplusDovetail_3513:HG2_10X_SVrefine210Xhap12_10578:HG2_PB_SVrefine2Falcon1plusDovetail_3753:HG2_PB_SVrefine2PB10Xhap12_11068;NumClusterSVs=17;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_9327:HG4_PB_assemblyticsfalcon_8519;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0814848;ClusterMaxSizeDiff=0.0805794;ClusterMaxEditDist=0.163176;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=1069;DistBack=-1;DistForward=1118;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:34113100-34113099;PctSeqSimilarity=0.9798;PctSizeSimilarity=0.9683;PctRecOverlap=0.9674;SizeDiff=-35;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1797.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:42:./.:18:6:0:26:0|1:23:0:0:14:0/1:30:12:0/1:43:101:.:1163:.
chr15	34186760	HG2_PB_SVrefine2PBcRplusDovetail_3515	T	TAGCACTTTGGGAGGCCGAGGCAGGGGGACTGCCTGAGCTCAGGAATTCAAGACTAACCTGGGCAACACGGTAAAACCCCATCTCTACAGAAATACAAAAAATTAGCTGGGCATGGCAGCATGTACCTGTAGTCCCAGCTACTCAGCAGGCTGAGGCAGGAGAATTGCTTGAACTTGGGAGGCGGAGGTTGCAGTCAGCTGAGATCGCGACACTGCACTCCAGTCCGGGTGACAGAGTGAGACTCCGTCTCCAAAAAAAAAAAAAGAAAAAAAAAATCATCAAGTCTGTCAAATGCAGTTTTCCCCTATGGGTGGCTCTTCAAGATTCACACTTTAACATAACGCTAAGGTTTGGGTATATTTTATTCTTGACATATATTCCTAAAATTGGAATTACTGGGTACAGGAATAAAATTTAGTTTGAAACTATTTGTTATGTTACTCTATAGATCTGCTGAAACATAGATCCAACGTGCAAATTCCATTCATAACATTCTCATCCACTTTTACACAAATGTGTGTTAAATGCCTACTATGTGTCAGATTAGAAGCTAGTGATACAGAATGTTATCCAAAGTCCCTGCTCTCATGGAATTACTACTACTTAAATGTCTACTAAAGGGAGAAGAAAATTTAAATGAATCACCTAGTTCCTGAAAGCCCTATCAATAACTTTTGTATTTACATACACAATTGTATTAAAAGTGTTATTATTTATTAAGTATATTAAGAAGTACAAGCCCTTCTACTTATTAAAATAATAGAATGTGGCCGGGCTTGGTGGCTCACACGTGTAATCCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9329:HG2_PB_HySA_27852:HG2_PB_SVrefine2PB10Xhap12_11070:HG4_PB_pbsv_15239:HG3_PB_pbsv_14982:HG4_PB_HySA_22232:HG2_PB_PB10Xdip_10625:HG2_PB_PB10Xdip_10624:HG2_Ill_MetaSV_1589:HG4_Ill_GATKHCSBGrefine_10493:HG3_Ill_MetaSV_1714:HG3_Ill_GATKHCSBGrefine_10053:HG2_Ill_GATKHCSBGrefine_10156:HG2_PB_pbsv_15339:HG2_PB_HySA_27851:HG3_Ill_Spiral_15796:HG4_Ill_Spiral_1185:HG3_PB_SVrefine2PBcRDovetail_7180:HG3_Ill_SVrefine2DISCOVARDovetail_10931:HG2_PB_SVrefine2Falcon2Bionano_7572:HG4_PB_SVrefine2PBcRDovetail_7599:HG4_Ill_SVrefine2DISCOVARDovetail_10764:HG2_PB_SVrefine2PBcRplusDovetail_3515:HG2_PB_SVrefine2PB10Xhap12_11069:HG2_PB_SVrefine2Falcon1plusDovetail_3754:HG2_Ill_SVrefine2DISCOVARplusDovetail_4146:HG2_10X_SVrefine210Xhap12_10580:HG3_PB_SVrefine2Falcon1Dovetail_9283;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10580:HG2_Ill_SVrefine2DISCOVARplusDovetail_4146:HG2_PB_SVrefine2Falcon1plusDovetail_3754:HG2_PB_SVrefine2PB10Xhap12_11069:HG2_PB_SVrefine2PBcRplusDovetail_3515:HG4_Ill_SVrefine2DISCOVARDovetail_10764:HG4_PB_SVrefine2PBcRDovetail_7599;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0591862;ClusterMaxSizeDiff=0.0591862;ClusterMaxEditDist=0.19293;PBcalls=17;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=800;DistBack=33628;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=263;REFWIDENED=15:34186761-34187023;PctSeqSimilarity=0.9815;PctSizeSimilarity=0.9988;PctRecOverlap=0.8165;SizeDiff=1;StartDistance=-146;EndDistance=-146;GTMatch=0;TruScore=93;MatchId=1798.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:0:25:0:21:./.:0:4:0:7:1/1:0:9:./.:7:78:.:.:.
chr15	34638811	HG2_PB_SVrefine2PBcRplusDovetail_3517	G	GGTGGCTCATGCCTGTAATCCCAGCACTTTGGAAGGCTGAGGCGGGTGGATCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTCCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCGCTTGAGGTCGGGAGTTCGAGACCAGCCTGACCAACGCGTGGAGAAACCCTATCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCATGGTGGCACATGCCTGTAATCTTAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAATCTGGGAGGCGGAGGTTGTGGTGAGCCAAGATCGCGTCATCGCACTCCAGCCTGGGCAACAAGAGCGAAACTCAGTCTCAAAAAAACAAAAAAAAACAAAAAAACAAAACACAAAAAACAGCTGCCTCTGCTCAGAGCCCCACGGCTCCTTCCAGCCCTAGAGGTGGCTTTGCTCTGAGTTCAGGAAGCAGTTTTTCCTGATTCATCTGGGCCAGGGAGGTGGGTCATGACAGCCAGGATGAGAGCAGGGGCTTCACTGAGATGCTCTTAGTTTTTCTTCCTTTTATGGATCTCAGGCCTTCAGGCCCCTTTCATTGTGTTCTGCACTCAGTGGCATACCCTCAGCCCTCTGCTCTGTGGCTGAAATGAGTTTGAATCTGAGTTTGCTCATGTCCCATGGTCAGAATGCAGAAGTTGAGTGGTGTTAGTTTGCCAGTGGAATATTTTTTGTAAGGGGGAGGAGATTTAAGCAGGTTATATTCTACCTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTGTGTCGCTTACGCTGGAGTGCAGTGGTGTGATGTTAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCTTTCCTCAGCCTCCTGAGCAGCTGGGATACAGGCGCCCACCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCCAACTCCTGACCTCAAGCGCCTGTAATCTCAGCACTTTGGGAGGCCGAGGGAGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAACTGGGCATGGTGGCGCCCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCTGCAGAGGTTGCAGTGAGCTGAAATTGTGCCACTGCGCTCCAGCCTAGGTGACAGAGACTCTGCCTCGGAAAAGAGAAAAAAAAAAAGTCCTAGGAGACACAGGTTCTCATCAATTAAGTACACATTTGTATACTTATCCTTGGTCTTTTTGACTAGAGTCCACGTAGCCCCTCCTCAGCTGGAACTGTGACAATGAAGGACTTCATTGTCCTTTCCTTAGCACCTAGCTCAGTGCCTTGTTCCTAGTGAGCCCTAAATTTCTGATATTAGGAGCTCCAAGTAGAAGGACCACAGATAGTCTGCATCGCCAAACATGTCCAGCAGTTACTTAAAGATGTGGAAACTTCTCTCCCCACACCGCCCTCCCCTCACTCATTTCCTTGTCCTTATCTAATCCTCTCTAATTATTCCTGGCTGTTATACAACAACATTTCTGGGAACCAAACATCCAATCCCCGTATCCTCTCCTGGGAACAGTACTTCTGTGAGTGGTGGCAGAGGCCACAGAGCAGCTGGGAGAAAGCAGGGTTCAGGTGGTTTGAATCTTTTGTTTGGAATAGGTGAGCATAGGAGATGTACATGTAATGCTGGGTGGAATGTGTTATGGGATATCTGAACTTCGTGGGTCCTAGAGTCACTGCTCCTGCTTATAGATTGAATCTTTCTTCTGTTGTTTTAGGTTAAGAGAGATTTATAAGAAGCAACAGGAAAAGGAAAAGGAGGAGGGAATAAGCCAATAATATTTTTGAAAGTGCCTCCTTCTCAAAGGCCTTGTGGATGCCTCGAGATGGGCTGGAACTTATCGTGGACTAGTTCCCTTACTGCACTGAGCCTGCTGTGGGCTGTTTTCTCTGCAGATCAGGTGTCAACCCAATTCTGTATCTTAGTAAACAGCCTATGGAGAGGCTGGAGAGGTCTGCCAGGAATTTTCTTAGAGAAGCACTTAGGGGACCGGGCACA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9285:HG2_Ill_SVrefine2DISCOVARplusDovetail_4149:HG4_PB_pbsv_15241:HG2_PB_HySA_27859:HG2_PB_pbsv_15341:HG3_PB_pbsv_14985:HG2_PB_HySA_27858:HG4_Ill_Spiral_1186:HG2_PB_HySA_27857:HG2_PB_SVrefine2PB10Xhap12_11073:HG4_PB_HySA_22238:HG2_PB_PB10Xdip_10629:HG2_PB_PB10Xdip_10628:HG3_PB_HySA_23027:HG2_PB_assemblyticsfalcon_8677:HG4_PB_assemblyticsfalcon_8529:HG2_PB_SVrefine2Falcon1plusDovetail_3756:HG3_PB_SVrefine2PBcRDovetail_7182:HG3_Ill_SVrefine2DISCOVARDovetail_10934:HG2_PB_SVrefine2PBcRplusDovetail_3517:HG2_PB_SVrefine2PB10Xhap12_11072:HG4_Ill_SVrefine2DISCOVARDovetail_10767:HG2_PB_SVrefine2Falcon2Bionano_7574:HG4_PB_SVrefine2Falcon1Dovetail_9331:HG4_PB_SVrefine2PBcRDovetail_7601;NumClusterSVs=25;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11072:HG2_PB_SVrefine2PBcRplusDovetail_3517:HG3_Ill_SVrefine2DISCOVARDovetail_10934;NumExactMatchSVs=3;ClusterMaxShiftDist=0.09093;ClusterMaxSizeDiff=0.09093;ClusterMaxEditDist=0.230357;PBcalls=21;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=2159;DistBack=35790;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=15:34638812-34638865;PctSeqSimilarity=0.9998;PctSizeSimilarity=1;PctRecOverlap=0.9893;SizeDiff=0;StartDistance=-23;EndDistance=-23;GTMatch=0;TruScore=99;MatchId=1799.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:1:23:0:21:./.:0:9:2:11:1/1:0:10:1/1:12:269:.:7629:.
chr15	34668595	HG3_PB_HySA_23030	T	TTTTTTCAGACTCAGCCCGCCTGCACCCAGGTGAAATAAATAGCCTTGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACATGAACATGTGAGACATTTGGTGCTGAAGACCCAGGTCAGCGGGACTTCTTCGGGAGACCAGTCCCCTGTCCTCACCCTCACTCCATGAAGAGATCCACCTACGACCCCGGGTCCTCAGACCAACCAGCCCAAGGAACATCTCACCGATTTTAAATCGGATAAGCAGCCTCTTTTTACTCTCTTATCCAACCTCTCTCACTATCCCTCAACCTCTTTCTCCTTTCAATCTTGGCGCCACACTTCAATCTCTCCCTACTCTTAATTTCAATTCCTTTCATTTTCTGGTAGAGACAAAGGAGACACATTTTATCTGTGGACCCAAAACTCCGGCGGTGGTCACAGACTTGGGAAGGCAGCCTTCCCTTGGTGTTTAATCATTGCAGGGATGCCTCTCTGATTATTCACCCATGTTCCATTGGTGTCTGATCTCTGTGGGGATGCCTGCCTTCATCATTCACCCACATTCCCTTGGTGGCAAGTCAATTGCCGGGATGCCTGCTTTGGCTGCTCACCCACATTGCAGCCCAGGGCTGCTCCCCAACCCCCTTCTCCATGTCTCTACCCTTCTCTTTAAACTTGCCTCCTTCACTATGGGCAAACTTCCACCCTCCATTCCTCCTTCTTCTCCCTTAGCCTGTGTTCTCAAGAACTTAAAACCTCTTCAACTCTCACCTGACCTAAAATCTAAGCATCTTATTTTCTTCTGCAACATCACTTGGCCCCAGTACAAACTCGACAATGGTTCTAAATGGCCAGAAAATGGCACTTTTGATTTCTCCATCCTACTAGATCTAGATAATTTTTCTTCGAAACATGGGCAAATGGTCTGAGGGGCCTGACATCTGGGCATTCTTTTACACATCGGTCACTCCCTAGTCTCTGCTCCCAATGCAACTTGTCCCAAATCTCTCTTCTTTCTCTCCTGTCTGTTCTTTCAGTCTCCACCCCAAGTTCTGAGTCCTTTGAATGCTTCTTTTCTACAGACTCATCTGACCTCTCCCTTCTCCCAAGGCTGCTCCTTGCCAGGCCAAGCCAGGTCCCAATTTTTCCTCAGCCTCTATTCCCCCACCCTATAATCCTTCTATCACCTGCCCTCCTCACACCCGGTCTGGCTTACAGTTTTGTTCCGCAACTAGCCCTCCCACACCTGCCCAACAATTTCCTCTTAAAGAGGTGGCTGGAGCTAAAGGCATAGTCAAGGTTAATGCTCCTTTTTTTCTTTATCTGACCTCTCCCAAATCAGCTAGCATTTGGGCTCTTTTTCATCAAATATAAAAACCCAGCCCAGTTCATGGCCCGTTTGGCAACAACCCTTAGACGCTTTACCGCCCTAGACCCAGAGGGCCAGAAGGCCATCTTATTCTCTTTGCATTTTATTACCCAATCCCCTCCCGGCATTAAAAAAAGCTCCAAAAATTGGATTCCAGCCCTCAAACCCCACAACAGCACTCAATTAACCTTGCCTTCAAGGTGTACGATAATAGAGTAGAGGCAACATATTTCTGAGTTGCAATTACTTGCCTCCACTGTGAGAGAAACCCCAGCCACATGTCCAGCACACAAGAACTTCAGAACGCCTGAGCTGCAGTGGCCAGATGTTCCTCCAGGACCGCCTCCCCCAGGATCTTGCTTCAAGTGCTGGAAATCTGGCCACTGGGCCAAGGAATGCCCACAGCCAGGATTCCTCCTAAGCTCTGTCCCATCTGTGCAGAACCCCACTGGAAATTGGACTGTCCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCATAAGGCTCTCTGACTGACTCCTTCCCAGATCTTCTCGGCTTAGCAGCAGAAGACTGACGCTGCCCAATTGCCTTGGAAGCCCCCTGGACCATCACAGATGCTTTGGGTAACTCTTACAGTGGAGGGTAAGTCCGTCCCCTTCTTAATCAATACGGAGGCTACCAACTCCATATTACTTTCTTTTCAAAGGCCTGTTTCCCTTGCCTCCGTAACAGTTGTGGGTATTGACAGCCAGGCTTCTAAACCTCTTAAAACTCCCCAACTCTGGTGTCAACTTGGACAACATTCTTTTATGCACTCATTTTAGTTATCCCCACCTGCCCAGCTCTCCCTTATTAGGTCAAGACATTTTAACTAAAATTATCTGCTTCCCTGACTATTCCTAGGCTACAGCCACACCTCATTGCTGCCCTTTTCCCCAGTTCAAAGCCTCCTTCATGTCCTCCCCTTGTTATCTCCCCACCTTAATCCACAAATATGGGATACCTCTACTTCCTCCCTGGCAACCGATCACACTCCCCTTACCATCCCATTAAAACCTAATCACCCTTACCCTGCTCAATGCCAATATCCCATCCCACAGCACCCTTTAAAAAGATTAAAGCCTGTTATCACTCGCCTGTTACAGCATGGTGTTTTAAAGCTTATAAACTCTCCTTACAGTTCCCCCATTTTACCTGTCCTAAAAACCAGACAAGCCTTACAGGTTAGTTCAGGATCTGCACCTTATCAACCAAATTGTTTTGCCTATCCACCCCATGGTGCCAAACCCATATACTCTCCTATCCTCAACACCTCCCTCCACAATCCATTATTCTGTTCTGGATCTCAAACGTGCTTTCTTTACTATTCCTTTGCACCCTTCATCCCAGCCTCTCTTCGCTTTCACTTGGACTGACCCTGACACCCATCAGGCTCAGCAAATTACCTGGGCTGTACCGCCGCAAAGCTTCACAGACAGCCCCATTACTTCAGTCAAGCCCAAGGCTTCACAGACAGCCCCCATTACTTCAGTCAAGCCCAAATTTCTTCCTCATCTGTTACCTATCTCGGCATAATTCTCACAAAAAACACACGTGCTCTCCCTGCTGATCATGTCCGACTAATCTCCCAAACCACAACCCCTTCTACAAAACAACTCCTTTCCTTCCTAGGCATGGTTAGGTACTTCCACCTTTGGATACCTAGTTTTACCATCCTGACTAAACCATTATATAAACTCACAAAAGCAAACCTAGCTGACCCCACAGATCCTAAATCTTTTCCCCACTCCTCTTTCCATTCCTTGAAGACAGCTTTAGAGACTGCCCCAACACTAGCTCTCCCTGATTCATCCCAACCATTTCATTACACACACAGCTGAAGTGCAGGGCTGTGCAGTTGGAATTTTTACACAAGCACCAGGACCGCACCCTGTAGCTTTTTTGTCCAAACAACTTGACCTTACTGTTTTAGGCTGGCCATCATGTCTCCGTGCTGTGGCCACCGCCGTCCTAATGCTTTTAGAGGCCCTCATACTCACAAACTATGCTCAACTCACTCTCTACAGTTCTCGTAACTTCCAAAATCTATTTTCTTCCTCACACCTGACACATATATTTCTGCTGCTCCCGGCTCCTTCAGCTGTACTCACTCTTTGTTGAGTTTCCCACAGTTACCATTGTTCCTGGCCCAGACATCAATCCAGCCTCCCACATTATTCCTGATATCACACCTGACCCCCATGACTGTATTTTCTCTGATACACTTGGCATTCACTCCATTTCCCCATATTTCCTTCTTTCCTGTTCCTCACCCTGATCACACTTGGTTTATTGATAGCAGTTCCACCAGGCCTAATTGCCCACACACCAGCAAAGGCAGGCTATGCTATACTATCTTCCACATCTATCATTGAGGCTACTGCTCTGTCCCCCTCCACTACCTCTCAGCAAGCCAAACTCATTGACTTAACTCAAGCCCTCACTCTTGCAAAGGGACTACATGTCAATATTTATACTGACCCCATATCCTGCACCACCATGCTGTTTTATGGGCTGAAAGGTTTCCTCACTATGCAAGGGTCCTCCATCATTAATGCCTCTTTAATAAAAACTCTTCTCAAGGCCGCTTTACTTCCAAAGGAAGCTGGAGTCATATACTGCAAGGGCCATCAAAAGGCATCAGATCCCATCGCTCAGAACAACACTTATGCTGATAAGGTAGCTAAAAAAAACAGCTAGCATTCCAACTTCTATCCCTCATGGCAGCTTTTCTCCTCATCAGTCACTCCCACCTACTCCCCCACTGAAACTTCCACCTATCAGTCTCTTCCCACACACAAGGCAAATGGTTCTTGGACCAAGGAAAATATCTCTTTCCAGCCTCACAGGCCCATTCTATTCTATGGTCATTTCATAACCTCTTTCATGTAGGTTACAAGCCGCTAGCCCACCTCTTAGAACTTCTCATTTCCTTTCCATCGTGGAAATCTATCCTAAAGGAAATCACTTCTCAGTGTTCCATCTGCTATTCTACTACCCCTCAGGGATTATTCATGCCCCCTCCCTTCCCTACACATCAAGCTCCAGGATTTGCACCTGCCCAGGACTGGCAAATTGACTTTACTCACATGCCCTGAGTCAGGAAACTAAAATACCTTTTGGTCTGGGTAGACACTTTGAACTGGATGGGTAGAGGCCTTTCCCACAGGGTCTAAACTCGCCAACCAAGCAAACAATAACGTTGAACCTCCTTGGACACTCTCTAATTGGACATCCTGGGTACTCCCAATTCTTAGTCCTTTAATACCTGTTTTTCTCCTTCTCTTATTCAGACCTTGTGTCTTTCTTTTAGTTTCTCAATTCATACAAAACTGCATCCAGGCCATCATCAATAATTCTATACGGCAAATGCTCCTTCTAACAACCCCACAATATCACCCCTTACCCCAAAATCTTCCTTCAGCTTAATCTCTCCCACTCTAGGTTCCCACACCACCCCTAATCCTGCTTGAAGCAGCCCTGAGAAACATCGCCCATTCTCTCTCCATACCACCCCCAAAAAATTTCGCCGCCCCAACGCTTTACCACTATTCCATTTTATTTTTCTTATTAATATAAGAAGACAGGAATGTCAGGCCTGTGAGCCCAAGCTAAGCCATCATATCCCCAGTGACCTGCACGTATACATCCAGATGGCCTGAAGCAACTGAAGATCCACGAAAGAAGTGAAAATAGCCTTAACTGATGACATTCCATCATTGTGTGATTTGTTTCTGCCCCACCCTAACTGATCAATGTACTTTGTAATCTCCCCCACCCTTGAGAAGGTTCTTTGTAATTCTCCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCTAACTCCACCACCTATCCAAAACCTGTAAGAACTAATGATAATCCACCACCCTTTGCTGACTAC	20	PASS	ClusterIDs=HG2_PB_HySA_27860:HG3_PB_HySA_23030:HG3_PB_HySA_23029:HG2_PB_PB10Xdip_10630:HG2_PB_PB10Xdip_10631:HG2_PB_SVrefine2Falcon2Bionano_7575:HG3_PB_SVrefine2Falcon1Dovetail_9286:HG4_PB_SVrefine2Falcon1Dovetail_9332:HG2_PB_SVrefine2PB10Xhap12_11074:HG2_PB_SVrefine2PBcRplusDovetail_3518:HG3_PB_SVrefine2PBcRDovetail_7183:HG3_Ill_SVrefine2DISCOVARDovetail_10935:HG2_Ill_SVrefine2DISCOVARplusDovetail_4150:HG4_PB_SVrefine2PBcRDovetail_7602:HG2_10X_SVrefine210Xhap12_10583:HG4_Ill_SVrefine2DISCOVARDovetail_10768:HG4_PB_HySA_22239:HG3_PB_HySA_23028:HG2_PB_SVrefine2Falcon1plusDovetail_3757;NumClusterSVs=19;ExactMatchIDs=HG3_PB_HySA_23030;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0230191;ClusterMaxSizeDiff=0.0230191;ClusterMaxEditDist=0.0416627;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=5309;DistBack=152;DistForward=95;DistMin=95;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=433;REFWIDENED=15:34668260-34668692;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9972;PctRecOverlap=0.9354;SizeDiff=15;StartDistance=336;EndDistance=336;GTMatch=0;TruScore=97;MatchId=1800.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:2:70:1/1:1:17:0:23:0/0:8:1:26:0:0/1:35:17:1/1:6:585:.:7629:.
chr15	36424772	HG4_Ill_manta_3569	AGG	CTGCTAATATATCAAAGTGTGATAGATACATTTTCTCCTATCTTATCTCACCTAATTAGTACTACAACTCTCTGAAGTAGGTATTATCATCTCCACTGAGCAGACAAGGAACTGAGATGATGAAGA	20	PASS	ClusterIDs=HG2_PB_HySA_27878:HG4_PB_SVrefine2PBcRDovetail_7608:HG4_Ill_manta_3569:HG4_Ill_SVrefine2DISCOVARDovetail_10778:HG4_Ill_Cortex_1153:HG2_PB_SVrefine2Falcon2Bionano_7580:HG2_Ill_manta_4209:HG2_Ill_SpiralSDKrefine_5439:HG2_Ill_Cortex_2811:HG2_10X_SVrefine210Xhap12_10587:HG4_Ill_svaba_19027:HG4_Ill_MetaSV_1652:HG2_Ill_svaba_19038:HG2_Ill_MetaSV_1594:HG4_PB_pbsv_15251:HG2_PB_pbsv_15350;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10587:HG2_Ill_Cortex_2811:HG2_Ill_SpiralSDKrefine_5439:HG2_Ill_manta_4209:HG2_PB_SVrefine2Falcon2Bionano_7580:HG4_Ill_Cortex_1153:HG4_Ill_SVrefine2DISCOVARDovetail_10778:HG4_Ill_manta_3569:HG4_PB_SVrefine2PBcRDovetail_7608;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0813008;ClusterMaxSizeDiff=0.0813008;ClusterMaxEditDist=0.173228;PBcalls=5;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=123;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=15:36424775-36424771;PctSeqSimilarity=0.9961;PctSizeSimilarity=1;PctRecOverlap=0.976;SizeDiff=0;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=99;MatchId=1802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:35:0|1:30:7:6:19:0|1:29:0:0:44:0/1:31:15:./.:.:.:.:.:.
chr15	36846913	HG3_Ill_GATKHCSBGrefine_10066	T	TAAGAAGGAACATTTCTTTTTTTTTTTTTTTTTTTTATTTTTTTATTTATTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATGTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4613:HG2_PB_pbsv_15352:HG4_PB_pbsv_15254:HG3_PB_pbsv_14995:HG2_PB_assemblyticsPBcR_8413:HG4_PB_HySA_22258:HG2_Ill_MetaSV_1595:HG4_Ill_MetaSV_1653:HG3_Ill_MetaSV_1720:HG3_Ill_GATKHCSBGrefine_10066:HG2_PB_SVrefine2PB10Xhap12_11080:HG2_Ill_GATKHCSBGrefine_10169:HG2_PB_SVrefine2PBcRplusDovetail_3527:HG2_PB_SVrefine2Falcon2Bionano_7582:HG4_PB_SVrefine2Falcon1Dovetail_9344:HG2_10X_SVrefine210Xhap12_10590:HG2_PB_SVrefine2Falcon1plusDovetail_3764:HG3_PB_SVrefine2Falcon1Dovetail_9292:HG2_PB_HySA_27883:HG3_PB_HySA_23050:HG2_PB_PB10Xdip_10637;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10169:HG2_PB_SVrefine2PB10Xhap12_11080:HG3_Ill_GATKHCSBGrefine_10066:HG3_Ill_MetaSV_1720;NumExactMatchSVs=4;ClusterMaxShiftDist=0.135057;ClusterMaxSizeDiff=0.135057;ClusterMaxEditDist=0.20977;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=349;DistBack=14191;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=15:36846914-36846930;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1803.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:3:31:0:8:./.:0:9:2:3:1/1:0:27:1/1:2:105:.:.:.
chr15	37707889	HG2_PB_SVrefine2Falcon2Bionano_7584	T	TTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAATATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCC	20	PASS	ClusterIDs=HG2_PB_pbsv_15356:HG2_PB_assemblyticsPBcR_8421:HG2_PB_HySA_27894:HG4_Ill_MetaSV_1655:HG3_PB_SVrefine2PBcRDovetail_7192:HG2_PB_SVrefine2Falcon2Bionano_7584:HG4_PB_SVrefine2Falcon1Dovetail_9346:HG2_PB_SVrefine2PB10Xhap12_11082:HG3_PB_SVrefine2Falcon1Dovetail_9294:HG2_PB_SVrefine2Falcon1plusDovetail_3767:HG2_PB_SVrefine2PBcRplusDovetail_3529:HG2_PB_PB10Xdip_10639:HG2_PB_PB10Xdip_10638:HG2_10X_SVrefine210Xhap12_10596:HG4_PB_HySA_22265:HG3_PB_pbsv_14998:HG4_PB_pbsv_15258;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7584:HG3_PB_SVrefine2PBcRDovetail_7192:HG4_Ill_MetaSV_1655;NumExactMatchSVs=3;ClusterMaxShiftDist=0.130152;ClusterMaxSizeDiff=0.130152;ClusterMaxEditDist=0.228491;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=673;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=15:37707890-37707915;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1804.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:./.:0:0:0:0:./.:0:2:0:1:1/1:0:20:1/1:7:181:.:.:.
chr15	39691590	HG3_Ill_MetaSV_1724	T	TTAAATGTCTGTGTTCGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAATAAAAATAAAAATAAAAAAAATAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10640:HG4_PB_HySA_22281:HG2_PB_pbsv_15359:HG2_PB_assemblyticsPBcR_8431:HG4_PB_pbsv_15261:HG4_PB_SVrefine2Falcon1Dovetail_9350:HG3_PB_pbsv_15004:HG3_PB_HySA_23070:HG3_PB_SVrefine2Falcon1Dovetail_9298:HG3_PB_SVrefine2PBcRDovetail_7195:HG4_PB_SVrefine2PBcRDovetail_7612:HG4_Ill_MetaSV_1657:HG4_Ill_GATKHCSBGrefine_10518:HG3_Ill_MetaSV_1724:HG2_PB_SVrefine2PBcRplusDovetail_3532:HG2_PB_SVrefine2PB10Xhap12_11085:HG2_PB_SVrefine2Falcon2Bionano_7587:HG2_Ill_GATKHCSBGrefine_10178:HG2_10X_SVrefine210Xhap12_10600:HG3_Ill_GATKHCSBGrefine_10075:HG2_PB_SVrefine2Falcon1plusDovetail_3769:HG2_Ill_MetaSV_1597:HG2_PB_HySA_27909:HG2_Ill_breakscan11_4614:HG2_PB_PB10Xdip_10641;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10600:HG2_Ill_GATKHCSBGrefine_10178:HG2_PB_SVrefine2Falcon2Bionano_7587:HG2_PB_SVrefine2PB10Xhap12_11085:HG2_PB_SVrefine2PBcRplusDovetail_3532:HG3_Ill_MetaSV_1724:HG4_Ill_GATKHCSBGrefine_10518:HG4_Ill_MetaSV_1657:HG4_PB_SVrefine2PBcRDovetail_7612;NumExactMatchSVs=9;ClusterMaxShiftDist=0.136585;ClusterMaxSizeDiff=0.136585;ClusterMaxEditDist=0.246006;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=307;DistBack=75199;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=15:39691591-39691605;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1805.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:1:28:0:27:1/1:0:7:0:11:1/1:0:23:1/1:2:70:.:.:.
chr15	39994624	HG4_Ill_GATKHCSBGrefine_10520	T	TAAAACTACTTTTTTTTTTTTTTTTTCTATCAAATGTGGTTTTTTTATTCAACAACTGACAAGCACTTTTCTACAGCTGCACTTGTGGAACATCACATGGCAAAAACAGGAGTTTTTTCGCTAGACTTTTTTCTTTTTAACCTTATTAAAAATGAGATTGGTCCTAAAAATATAGAAAGAAATAAATTTAAATTCACAAAAAACTGTACATTATCAAAAAGTCACTAAAACACCACATTTGGTTATATAAAAAGTCCCTTTTGCTGTAAAAGGAACACAGAAACTTGTTGGTGTTGATGGTGTGGTTTCTTCCTGTCAACCAGACTGATGGGAGGGAAGCAAAAGGGCAGGGGGTGGGTTGTCTTTTTATTTTAAACCTGCTTTCCCTACCAAATACTCTTGAGCTAGGTGGATTTTCTCTTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4615:HG4_PB_pbsv_15263:HG2_PB_pbsv_15361:HG3_PB_pbsv_15006:HG2_PB_assemblyticsPBcR_8433:HG4_PB_assemblyticsfalcon_8568:HG3_Ill_MetaSV_1726:HG2_PB_SVrefine2Falcon2Bionano_7589:HG4_Ill_SVrefine2DISCOVARDovetail_10789:HG4_Ill_MetaSV_1659:HG4_Ill_GATKHCSBGrefine_10520:HG3_Ill_SVrefine2DISCOVARDovetail_10960:HG3_Ill_GATKHCSBGrefine_10077:HG2_PB_SVrefine2PBcRplusDovetail_3534:HG2_PB_SVrefine2PB10Xhap12_11087:HG2_PB_SVrefine2Falcon1plusDovetail_3771:HG2_Ill_SVrefine2DISCOVARplusDovetail_4165:HG2_Ill_MetaSV_1599:HG2_Ill_GATKHCSBGrefine_10180:HG2_10X_SVrefine210Xhap12_10602:HG4_PB_SVrefine2Falcon1Dovetail_9352:HG4_PB_SVrefine2PBcRDovetail_7614:HG3_PB_SVrefine2Falcon1Dovetail_9300:HG4_PB_HySA_22282:HG2_PB_PB10Xdip_10643:HG2_PB_PB10Xdip_10642;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10602:HG2_Ill_GATKHCSBGrefine_10180:HG2_Ill_MetaSV_1599:HG2_Ill_SVrefine2DISCOVARplusDovetail_4165:HG2_PB_SVrefine2Falcon1plusDovetail_3771:HG2_PB_SVrefine2PB10Xhap12_11087:HG2_PB_SVrefine2PBcRplusDovetail_3534:HG3_Ill_GATKHCSBGrefine_10077:HG3_Ill_SVrefine2DISCOVARDovetail_10960:HG4_Ill_GATKHCSBGrefine_10520:HG4_Ill_MetaSV_1659:HG4_Ill_SVrefine2DISCOVARDovetail_10789;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0998811;ClusterMaxSizeDiff=0.0998811;ClusterMaxEditDist=0.187283;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=422;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=15:39994625-39994637;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1806.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:109:1/1:4:34:1:38:1/1:0:13:0:11:1/1:0:36:1/1:3:71:.:.:.
chr15	40854179	HG2_PB_SVrefine2PB10Xhap12_11091	T	TTCAGGAAATATATTTTTTTTTTAAAGAAATATATAACTATTTATTAACCACTGTTCAGTATTTACAATAAAGTAAACAATATACAGTTGGATAACATTTTGATTACTACAAAGTTGTTCTTCCTGGCTTTTGCTGAACCAGTAAAGCAAACTCAAGATTGAGCCTCCATGTAATGAATTGGGGTAAAGAAAAAACATGCAGGTCAATAGGTTAGGTTACAAAAGGTTGTTCACACATTTATGACAGCAGGTCCTAAACTGCCAACACCTCTAACCATCTGATTAGGTTTCTATGAGCCAAGTCTTACATATTCCATTCATCATGACCTTTTAGTCAATGTAGCAACAGGGATTCCAACATTTTGCTAAGGAATGGCCCGCTAGGGAAACTTTTAAATGTTCATTTAACTTAGTTTTGTTTAGCTAGTTAAAACACACTAGCATTTGTCTAGTTTCCTCATCTGGATGAGGAAACCTGCTGTGATGGCAGTGATAAAATTTTTCCTTTTAGGAATTTTGCAAATAAACCACTGCAATTATAGACACTTTAAAATTATCCAATTTAAATTGTCCTATCTAGAATTACTTATTTCACTTGAAATGTATGGCTTCAGGAAAATTTTCAATTTAACTTGAAGGGATTATCTCTTATTTTGCTTGGAATAATGGCATCTCAGAAACATGGGTTTACCTGTGATTTTTTTGTTTGGGTGAATGCTTAAAAACAAAAAAAAATTTACATATGCATTTTATGGATACACACACACACACACACACACACACAAAACACGTAATAAATCTAGAATGGTCCTTAGGCTTATGAGAACACAAGTTTTGACTGAGTAATGACTATGGACATTTCCCCCAACATTTAGAAAAGCTGTTCTTTAATGAAGAGGAAATGATATACCATGGTATCAAATGTTCTTTTCTGATAAAGGAAGCAACTACAGAAAGCTTTTATTTATTTGTTCAAAGTAACCAGTGCTATGGATGCAAAAAACCCCCAACAACTCTTCCAACGCTACTTTCAAAACAAACATATCAAACTTGATTTTCATTAGGATGTAGTTATTTTGTCACACTAGTAAATCAAAATCTAAGACCCAATTTTTATATATATATATAAATATATATAAAAAAACAATGTGAACAATTATTGAGCTTCATCTTCTGGACAAGAATGCCAAGTTAGTCTCTCTTCATAAAAAGCAATTACAATTTGAGGACACTTCATATTTGCCTCTTTCGCCAGCACCAAGTCTGCCTCATCTGAATCTTTCCATTTCATGAGAAACATCAATTCTCCACTGCTGTCTGTGGCACCAATTATTCTTTCAGGATCAAGACCTCTGGCAAATCCTCTTGGTTTGTCAGCAGCATCTCTTTTCTTCTTTGATTTGCTGTCATCAGATTCACTGTCAGATAAAGATTTTCTTTTTGTACCATCTTTTTCTTTGCCAGCTTTCTGAGAGTTAAGAAACGCTTCAATCAATTCTGGACAATCTAAATTTTCTTCAGGTTCCCAAGTATTGTCAGCATCTGTAAATCCCTTCCACTTCAGGAAATATTCCACTTTCCCATTCACTACACGTCGATCTAGTACTTTTTCCACGACAAATTCTTCAGGCTCTGCCTCTTCAACTTTTTACTCTTTCCATTCTGTTTTTTTCCATTTTTTGCAATGTAGTTTTGTTGGAGGCCATTTTTTATTGCAGACTTGAAGAGCTATTATTCACCGCCTCCGAGCTGCTCCGGGTCGCGGGTCTGCAGCGTCTCCGGCCCTCCGCGCCTACAGCTCAAGCCACATCCGAAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10652:HG4_PB_SVrefine2PBcRDovetail_7617:HG4_PB_SVrefine2Falcon1Dovetail_9355:HG3_PB_SVrefine2Falcon1Dovetail_9303:HG2_PB_SVrefine2Falcon1plusDovetail_3774:HG2_10X_SVrefine210Xhap12_10606:HG2_PB_SVrefine2PBcRplusDovetail_3538:HG2_PB_SVrefine2PB10Xhap12_11091:HG2_Ill_breakscan11_4616;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11091;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0194229;ClusterMaxSizeDiff=0.0188679;ClusterMaxEditDist=0.0410655;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=1815;DistBack=8038;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=15:40854180-40854194;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9983;PctRecOverlap=0.9978;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:50:./.:12:7:5:15:1|0:0:14:35:0:0/1:28:15:0/1:71:117:.:1852:.
chr15	41235858	HG3_PB_pbsv_15013	C	CCCCTTCCAGGCCGGGCGCGGTGGCTCACGCCTGTTAATCCAGCACTTATTGGAAGGCCGAGGCGGGCGGATTCACGGAGGTATGAATCGAGCACCATCCGGCCAAACAACCGGTGAAACCCCGCTCTACTAAACTACAAAATTAGCCGGCGTTGGCGGGCGCCTGTAGTCCCACTACTTGGGCCGCTGAGGCAGGAAGAGTGAAGGCGTGAAACCCGGAGGCGCGAAGCTTGGCAGGAGCCGAATCCCCCGCCACTGCAACTCCAGCCTGGCACAGAGCGAGACCTCCTCTCAAAAAAAAAAAAAAAAAAAACAAAAAAAAGGT	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1727:HG2_PB_pbsv_15368:HG2_PB_HySA_27922:HG3_PB_pbsv_15013:HG2_PB_HySA_27921:HG2_Ill_GATKHCSBGrefine_10183;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_15013;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0301659;ClusterMaxSizeDiff=0.021309;ClusterMaxEditDist=0.273973;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=324;DistBack=1110;DistForward=37800;DistMin=1110;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:41235859-41235858;PctSeqSimilarity=0.9207;PctSizeSimilarity=0.9878;PctRecOverlap=0.9726;SizeDiff=-4;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=96;MatchId=1808.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:24:0|1:28:2:1:21:0|1:15:0:1:5:0/1:32:8:0/1:7:8:.:.:.
chr15	41948542	HG4_Ill_GATKHCSBGrefine_10523	T	TTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTC	20	PASS	ClusterIDs=HG3_PB_pbsv_15019:HG4_PB_assemblyticsfalcon_8584:HG2_PB_pbsv_15373:HG4_PB_HySA_22294:HG4_Ill_GATKHC_24336:HG4_Ill_GATKHCSBGrefine_10523:HG2_PB_assemblyticsfalcon_8730:HG4_PB_pbsv_15275;NumClusterSVs=8;ExactMatchIDs=HG2_PB_assemblyticsfalcon_8730:HG4_Ill_GATKHCSBGrefine_10523:HG4_Ill_GATKHC_24336;NumExactMatchSVs=3;ClusterMaxShiftDist=0.2;ClusterMaxSizeDiff=0.2;ClusterMaxEditDist=0.262069;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=-1;DistForward=797;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=15:41948517-41948576;PctSeqSimilarity=0.9844;PctSizeSimilarity=0.9688;PctRecOverlap=0.9692;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:./.:6:17:20:7:./.:1:15:8:8:0/1:11:14:./.:.:.:.:.:.
chr15	42633306	HG3_PB_pbsv_15021	C	CTGGCCCGGGCGCGGTGGGCTCACGCTGTAATCCCAGCAACTTTGGGAGGCCGAGGCGGCGGGATCACGAGGTCAGAGATCGGAGACCATCCTGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCGGGCGTGGTAGCGGGCGCCTGTTAGTCCCAAGCTACCTCGGGAGCTGAGGGCCAGGAGAATTGGCGTGAACCCGGAGGCGGAGCTGCAGTGAGCCGAGATCGCGCCACCACACATCCAGCCTGGGCCGACGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAGTGTAAATTA	20	PASS	ClusterIDs=HG3_PB_HySA_23095:HG3_PB_pbsv_15021:HG3_Ill_GATKHCSBGrefine_10084:HG2_Ill_MetaSV_1604:HG2_PB_HySA_27932:HG2_PB_assemblyticsfalcon_8734:HG2_PB_SVrefine2Falcon2Bionano_7596:HG2_PB_pbsv_15375:HG2_PB_SVrefine2Falcon1plusDovetail_3778:HG3_PB_SVrefine2Falcon1Dovetail_9307;NumClusterSVs=10;ExactMatchIDs=HG3_PB_pbsv_15021;NumExactMatchSVs=1;ClusterMaxShiftDist=0.168254;ClusterMaxSizeDiff=0.168254;ClusterMaxEditDist=0.238095;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=1;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:42633307-42633306;PctSeqSimilarity=0.9574;PctSizeSimilarity=0.9748;PctRecOverlap=0.9401;SizeDiff=8;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=95;MatchId=1810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:46:0|1:35:2:0:32:0|1:24:0:0:5:0/1:28:8:0/1:11:14:.:.:.
chr15	44823515	HG4_Ill_GATKHCSBGrefine_10529	G	GCCAATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7601:HG3_PB_HySA_23110:HG4_PB_pbsv_15284:HG4_PB_assemblyticsfalcon_8596:HG3_PB_assemblyticsfalcon_8720:HG4_PB_SVrefine2Falcon1Dovetail_9367:HG3_PB_pbsv_15030:HG2_PB_pbsv_15381:HG2_PB_HySA_27957:HG3_PB_SVrefine2Falcon1Dovetail_9314:HG4_PB_HySA_22317:HG4_Ill_MetaSV_1666:HG4_Ill_GATKHCSBGrefine_10529:HG3_Ill_MetaSV_1733:HG3_Ill_GATKHCSBGrefine_10091:HG2_Ill_MetaSV_1609:HG2_Ill_GATKHCSBGrefine_10190:HG3_PB_SVrefine2PBcRDovetail_7209:HG2_PB_PB10Xdip_10669:HG2_PB_PB10Xdip_10668:HG2_PB_SVrefine2Falcon1plusDovetail_3783:HG4_PB_SVrefine2PBcRDovetail_7623:HG2_PB_SVrefine2PBcRplusDovetail_3545:HG2_PB_SVrefine2PB10Xhap12_11100;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10190:HG2_Ill_MetaSV_1609:HG3_Ill_GATKHCSBGrefine_10091:HG3_Ill_MetaSV_1733:HG4_Ill_GATKHCSBGrefine_10529:HG4_Ill_MetaSV_1666;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0840336;ClusterMaxSizeDiff=0.0840336;ClusterMaxEditDist=0.191597;PBcalls=18;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=302;DistBack=-17;DistForward=48208;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=71;REFWIDENED=15:44823462-44823532;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1811.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:1:17:0:10:./.:0:1:0:4:1/1:0:31:1/1:1:50:.:.:.
chr15	45753622	HG2_PB_SVrefine2Falcon1plusDovetail_3785	T	TAACCATCACCACCACCACCATCATCACCACCACACCATCACCACACCACTACCACCACCACCATCACCACCATCATCATCACCACCAGCACCACACCATCACCCACACATCATCATCACCACCACACCATCACCACCACCACTACCACCACCACCATCACACCATCATCATCACCACCAGCACC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3785:HG2_PB_HySA_27968:HG2_PB_pbsv_15385:HG3_PB_pbsv_15034;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3785;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0585106;ClusterMaxSizeDiff=0.0583554;ClusterMaxEditDist=0.170213;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=184;DistBack=-9902;DistForward=-1;DistMin=-9902;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=380;REFWIDENED=15:45753598-45753977;PctSeqSimilarity=0.984;PctSizeSimilarity=0.9787;PctRecOverlap=0.9788;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1812.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:34:./.:6:3:0:9:./.:24:13:21:25:0/0:13:0:./.:.:.:.:.:.
chr15	45989679	HG2_PB_SVrefine2Falcon1plusDovetail_3786	T	TGATAGTTTTCTTTTTTTTTTTTTTTTTTTTTTAAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGCCGGCAGGCGGGCGCCCCACCTCCCTCCGACGGCGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGGGCGCGGCTGGCCGGCACGGGGGGCCGACCCCCCACCTCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGCGGCGACCCCCCCACCTCCCTCCGGACGGGGCGCTGGCCGGGCAGGGGGCTCCTCACTTCCCAGTAGGGCGCCGGCCCGGGCAGAGGCCGCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGCGACCCCCCACCTCCCTCCCGGACAGGGCGGCTTGGCCGGGCGGGGGCGACCCCCCCACCTCCTCCCGGACGGGCGGCTGGCCGGGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGCAGAGGGCTCCTCACTTCCAGTAGGGCGGCCGGGCAGAGCGCCCCTCACCTCCCGGACGGGCGGCTGGCTGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACCTCCCTCCGGACGGGGCGGCTGGCCGGGCAGAGGGCCCTCACTTCCCAGAGGGCGGCTGGCCGGGCAGAGGCGCCCCTCACCTCCCGACGGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGCGGCTGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCTACCTCCCTACCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGGCTGACCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCAGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGCTCCTTGCCCTCGGGCCCCGCGGGGCCCGTCCGCTCCTCCAGCCGCTGCCTCCCGGGCGGCGCTCGCCGGCGCGGCGGCAAAGACTGAGACAGCTCCGCTGCCCGCTGAACTCCATCCTCCCGGCGGTCGGGCGGCGGCGGCTGCGGTCGGTCGCGGCAGCGGCTCCGCTTCATATCTGCAGCTGGGGCCCGCGGGCGTCAGCGCCGCGACTGTCCTGGCTCCGCACTGCCCCGGGCCGCAGCGCAGCCGCGCCAACCACCAGCCGCGGCCACCATGGCCAGACGGGCTCCCTAAGCCACCGACCCCAGCCCGCGGCGCCTTCGACCCTTCTGGGGCCTCCGGCGCCGCGACCTCCTCTGCCTGAAATTTCTTTTTTCTTTTCCTTTTATTTTATTTTATTTTTTGAGACGGAGTCTTGCTCTGTTGTCTGGGTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTGAAGCGATTTTCCTGCCTCAGCCTCAGCCTCCTGAGTAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3786:HG2_PB_pbsv_15386:HG3_PB_pbsv_15035:HG2_PB_PB10Xdip_10674:HG4_PB_assemblyticsfalcon_8607:HG4_PB_pbsv_15290:HG4_PB_HySA_22324:HG2_PB_SVrefine2PBcRplusDovetail_3547:HG2_PB_SVrefine2PB10Xhap12_11104;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3786;NumExactMatchSVs=1;ClusterMaxShiftDist=0.13522;ClusterMaxSizeDiff=0.13522;ClusterMaxEditDist=0.267976;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=2962;DistBack=393;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=15:45989680-45989691;PctSeqSimilarity=0.9533;PctSizeSimilarity=0.9179;PctRecOverlap=0.9182;SizeDiff=-265;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=1814.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:0|1:27:0:0:26:0|1:39:0:0:8:0/1:22:8:0/1:87:219:.:3274:.
chr15	47571300	HG2_PB_SVrefine2PB10Xhap12_11107	T	TTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTA	20	PASS	ClusterIDs=HG3_PB_pbsv_15041:HG4_PB_SVrefine2PBcRDovetail_7630:HG3_PB_SVrefine2PBcRDovetail_7215:HG3_PB_SVrefine2Falcon1Dovetail_9321:HG2_PB_SVrefine2PBcRplusDovetail_3550:HG2_PB_SVrefine2PB10Xhap12_11107:HG2_PB_SVrefine2Falcon1plusDovetail_3788:HG4_PB_SVrefine2Falcon1Dovetail_9372:HG4_Ill_GATKHCSBGrefine_10536:HG3_PB_assemblyticsfalcon_8739:HG3_Ill_GATKHCSBGrefine_10097:HG2_PB_SVrefine2Falcon2Bionano_7607:HG2_Ill_GATKHCSBGrefine_10196:HG2_PB_PB10Xdip_10676:HG2_PB_pbsv_15392:HG2_PB_HySA_27982:HG4_PB_pbsv_15297;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3788:HG2_PB_SVrefine2PB10Xhap12_11107:HG2_PB_SVrefine2PBcRplusDovetail_3550:HG3_PB_SVrefine2Falcon1Dovetail_9321:HG3_PB_SVrefine2PBcRDovetail_7215:HG4_PB_SVrefine2PBcRDovetail_7630;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0561798;ClusterMaxSizeDiff=0.0335196;ClusterMaxEditDist=0.187845;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=90;DistBack=-1;DistForward=25329;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:47571301-47571300;PctSeqSimilarity=0.9889;PctSizeSimilarity=0.9778;PctRecOverlap=0.978;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1815.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:1/1:0:8:1:29:./.:0:0:0:0:./.:0:6:./.:.:.:.:.:.
chr15	48562844	HG2_Ill_SVrefine2DISCOVARplusDovetail_4200	C	CATATATATATTATATACTCCAAGTATATATATATTATTTATATATATACACATACACACAATTGTGGAGTATATAATATATAATACTTATGTGTGTATGTGTGTATATATATATATATATATATATATATACTCTAAGTATTATATATTATATACTCCAAAACTGTGTGTGTGTGTGTATATATATATATATATATGTATAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9374:HG2_PB_pbsv_15394:HG3_PB_pbsv_15043:HG4_PB_pbsv_15301:HG2_PB_HySA_27991:HG4_Ill_MetaSV_1673:HG4_Ill_GATKHCSBGrefine_10538:HG2_Ill_manta_4226:HG2_Ill_MetaSV_1614:HG2_Ill_GATKHCSBGrefine_10198:HG3_PB_SVrefine2PBcRDovetail_7216:HG2_PB_SVrefine2Falcon1plusDovetail_3789:HG4_PB_SVrefine2PBcRDovetail_7633:HG3_Ill_SVrefine2DISCOVARDovetail_10999:HG2_PB_SVrefine2PBcRplusDovetail_3552:HG2_PB_SVrefine2Falcon2Bionano_7608:HG2_Ill_SVrefine2DISCOVARplusDovetail_4200:HG3_PB_SVrefine2Falcon1Dovetail_9323;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4200:HG2_PB_SVrefine2Falcon2Bionano_7608:HG2_PB_SVrefine2PBcRplusDovetail_3552:HG3_Ill_SVrefine2DISCOVARDovetail_10999:HG4_PB_SVrefine2PBcRDovetail_7633;NumExactMatchSVs=5;ClusterMaxShiftDist=0.105516;ClusterMaxSizeDiff=0.101205;ClusterMaxEditDist=0.230958;PBcalls=11;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=202;DistBack=16054;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=131;REFWIDENED=15:48562845-48562975;PctSeqSimilarity=0.962;PctSizeSimilarity=0.9703;PctRecOverlap=0.4778;SizeDiff=6;StartDistance=-103;EndDistance=-103;GTMatch=0;TruScore=80;MatchId=1816.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:79:./.:1:70:0:0:./.:0:2:1:4:./.:3:22:./.:.:.:.:.:.
chr15	48740414	HG2_PB_HySA_27995	G	GAAAAATAAGCCGGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATTCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTTAGTCCCAGCTACTCGGGAGGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAGTAGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10679:HG3_PB_assemblyticsfalcon_8748:HG2_PB_pbsv_15395:HG4_PB_pbsv_15303:HG2_PB_HySA_27995:HG2_PB_assemblyticsfalcon_8776:HG2_PB_SVrefine2Falcon2Bionano_7610:HG2_PB_SVrefine2Falcon1plusDovetail_3791:HG2_PB_SVrefine2PB10Xhap12_11111:HG2_PB_SVrefine2PBcRplusDovetail_3554:HG3_PB_SVrefine2Falcon1Dovetail_9325:HG4_PB_HySA_22346:HG2_PB_HySA_27994:HG2_PB_PB10Xdip_10680:HG2_Ill_breakscan11_4617;NumClusterSVs=15;ExactMatchIDs=HG2_PB_HySA_27995;NumExactMatchSVs=1;ClusterMaxShiftDist=0.135952;ClusterMaxSizeDiff=0.135952;ClusterMaxEditDist=0.198251;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=341;DistBack=-7;DistForward=6;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=15:48740407-48740422;PctSeqSimilarity=0.9885;PctSizeSimilarity=0.9795;PctRecOverlap=0.9677;SizeDiff=7;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=97;MatchId=1817.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:54:./.:10:23:11:9:1|0:1:5:27:0:0/1:36:15:0/1:10:21:.:.:.
chr15	51169673	HG4_Ill_150bpfermikitraw_19377	A	AAGACTTGAGAAATCAATAGTCCAAGCCCTTTATATGAAGAATGAGGAAATTGAGGCTCAG	20	PASS	ClusterIDs=HG2_PB_pbsv_15407:HG4_PB_pbsv_15312:HG3_PB_pbsv_15054:HG4_PB_assemblyticsfalcon_8635:HG2_PB_PB10Xdip_10698:HG2_PB_PB10Xdip_10697:HG2_Ill_breakscan11_4619:HG4_PB_SVrefine2PBcRDovetail_7635:HG4_PB_SVrefine2Falcon1Dovetail_9380:HG4_Ill_svaba_19110:HG4_Ill_manta_3585:HG4_Ill_SVrefine2DISCOVARDovetail_10831:HG4_Ill_Krunchall_21101:HG4_Ill_GATKHC_24400:HG4_Ill_GATKHCSBGrefine_10545:HG4_Ill_250bpfermikitraw_20117:HG4_Ill_150bpfermikitraw_19377:HG3_PB_SVrefine2PBcRDovetail_7226:HG3_PB_SVrefine2Falcon1Dovetail_9333:HG3_Ill_svaba_19282:HG3_Ill_manta_3450:HG3_Ill_Spiral_15889:HG3_Ill_SVrefine2DISCOVARDovetail_11010:HG3_Ill_Krunchall_20388:HG3_Ill_GATKHC_24353:HG3_Ill_GATKHCSBGrefine_10112:HG3_Ill_FB_13177:HG3_Ill_250bpfermikitraw_19840:HG3_Ill_150bpfermikitraw_19300:HG2_PB_SVrefine2PBcRplusDovetail_3558:HG2_PB_SVrefine2PB10Xhap12_11117:HG2_PB_SVrefine2Falcon2Bionano_7616:HG2_PB_SVrefine2Falcon1plusDovetail_3797:HG2_Ill_svaba_19130:HG2_Ill_manta_4231:HG2_Ill_SpiralSDKrefine_5513:HG2_Ill_SVrefine2DISCOVARplusDovetail_4212:HG2_Ill_Krunchall_20781:HG2_Ill_GATKHC_24497:HG2_Ill_GATKHCSBGrefine_10208:HG2_Ill_FB_13211:HG2_Ill_250bpfermikitraw_20433:HG2_Ill_150bpfermikitraw_19267:HG2_10X_SVrefine210Xhap12_10637:HG2_PB_HySA_28007;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10637:HG2_Ill_150bpfermikitraw_19267:HG2_Ill_250bpfermikitraw_20433:HG2_Ill_FB_13211:HG2_Ill_GATKHCSBGrefine_10208:HG2_Ill_GATKHC_24497:HG2_Ill_Krunchall_20781:HG2_Ill_SVrefine2DISCOVARplusDovetail_4212:HG2_Ill_SpiralSDKrefine_5513:HG2_Ill_manta_4231:HG2_Ill_svaba_19130:HG2_PB_SVrefine2Falcon1plusDovetail_3797:HG2_PB_SVrefine2Falcon2Bionano_7616:HG2_PB_SVrefine2PB10Xhap12_11117:HG2_PB_SVrefine2PBcRplusDovetail_3558:HG3_Ill_150bpfermikitraw_19300:HG3_Ill_250bpfermikitraw_19840:HG3_Ill_FB_13177:HG3_Ill_GATKHCSBGrefine_10112:HG3_Ill_GATKHC_24353:HG3_Ill_Krunchall_20388:HG3_Ill_SVrefine2DISCOVARDovetail_11010:HG3_Ill_Spiral_15889:HG3_Ill_manta_3450:HG3_Ill_svaba_19282:HG3_PB_SVrefine2Falcon1Dovetail_9333:HG3_PB_SVrefine2PBcRDovetail_7226:HG4_Ill_150bpfermikitraw_19377:HG4_Ill_250bpfermikitraw_20117:HG4_Ill_GATKHCSBGrefine_10545:HG4_Ill_GATKHC_24400:HG4_Ill_Krunchall_21101:HG4_Ill_SVrefine2DISCOVARDovetail_10831:HG4_Ill_manta_3585:HG4_Ill_svaba_19110:HG4_PB_SVrefine2Falcon1Dovetail_9380:HG4_PB_SVrefine2PBcRDovetail_7635;NumExactMatchSVs=37;ClusterMaxShiftDist=0.115702;ClusterMaxSizeDiff=0.115702;ClusterMaxEditDist=0.16;PBcalls=15;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=60;DistBack=1;DistForward=11210;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=15:51169674-51169676;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1818.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:54:1/1:3:26:2:18:1/1:1:28:1:31:1/1:0:61:./.:.:.:.:.:.
chr15	51222269	HG2_PB_SVrefine2PB10Xhap12_11118	C	CTTTTTTTTTTTTGAGATTGAGTTTCGCTTTTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTCAGCTCACCACAACCTCCCCGTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCATGTGCCACCACACCCGGCTTATTTGGTATTTTTAGTAGAACCAGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGATGATCCACTGGCTCGGCCTCCCAGAGTGCTGGGATTACAGGTGTGAGCCACTGTGCCTGGCCGATTTTGGGGACTTTTAATGTTTAGTCTTGGCTGTGCTCTTCTACCCAGAACAAATTTTTTTTTTTTTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3798:HG3_PB_pbsv_15055:HG4_PB_pbsv_15313:HG3_PB_HySA_23161:HG4_PB_HySA_22360:HG3_Ill_MetaSV_1742:HG2_Ill_MetaSV_1617:HG4_Ill_MetaSV_1675:HG4_Ill_GATKHCSBGrefine_10546:HG2_PB_PB10Xdip_10700:HG2_PB_PB10Xdip_10699:HG2_PB_HySA_28008:HG2_PB_pbsv_15408:HG4_PB_SVrefine2PBcRDovetail_7636:HG3_PB_SVrefine2Falcon1Dovetail_9334:HG3_PB_SVrefine2PBcRDovetail_7227:HG3_Ill_SVrefine2DISCOVARDovetail_11012:HG2_PB_SVrefine2PBcRplusDovetail_3559:HG2_PB_SVrefine2PB10Xhap12_11118:HG2_PB_SVrefine2Falcon2Bionano_7617:HG2_Ill_SVrefine2DISCOVARplusDovetail_4213:HG4_Ill_SVrefine2DISCOVARDovetail_10832:HG4_PB_SVrefine2Falcon1Dovetail_9381;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4213:HG2_PB_SVrefine2Falcon2Bionano_7617:HG2_PB_SVrefine2PB10Xhap12_11118:HG2_PB_SVrefine2PBcRplusDovetail_3559:HG3_Ill_SVrefine2DISCOVARDovetail_11012:HG3_PB_SVrefine2PBcRDovetail_7227;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0486486;ClusterMaxSizeDiff=0.0432432;ClusterMaxEditDist=0.247645;PBcalls=16;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=364;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=294;REFWIDENED=15:51222270-51222563;PctSeqSimilarity=0.9748;PctSizeSimilarity=0.9973;PctRecOverlap=0.4712;SizeDiff=1;StartDistance=-192;EndDistance=-192;GTMatch=0;TruScore=81;MatchId=1819.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:1:36:0:26:./.:0:6:0:3:1/1:0:8:1/1:2:41:.:.:.
chr15	52264752	HG2_Ill_GATKHCSBGrefine_10210	C	CGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATTGCCTGAGCTCCTGAGTTTGCGACCAGCCTGGGCAACACGGTGAAACCCCGTGTCTACTAAAATACAAAAAATTAGCCGGGTGTGGTGGCGGGCGCCTGTCGTCCCAGCTACTCGGGAGGCTGAGGAATTAGAATTGCTTGAACCCGGACAGTGGAGGTTGCTGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACTGAGCGAGACTCCATCTCAAAAAATAAAATAAATAAATAAATAAAAAGAACATTATTTTCTAAAAAATATTTAGGCCAGGCGCGGTGGCTTACTCCTGTAATCCCAGCTCTTTGGGAGACCGAGGCGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATGCAAAATTTAGCCGGGCATGGTGGCACATGACTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAAACCTGGGAGGTAGAGGTCGCAGTGAGCCGAGATTGTGCCGTTGCACTCCAGCCTGGAGACAGAGTGAAACTGCATCTCAAAAAAAAAAATTTTAGAAGAGTGGAACTGTTTTAGTTTTGAAAATATCTTTAATGCCTAGCTTAAAAGAAGACGTCTGAATTATCATACCTGTTTCTACAATCTGTTGAGAAATGTAGTTGAAGCACATGAAGAAAATCTGGTCTTGCACAAATACATTTGTAATTGGAAAAGGGAGGCTCTCTCAGGGCTCTCTCAGATCCCCTGAAAGAGTCTCCATCCAACCACAGCTTTGGAGCAGTGATTCTCAAACATCATAGATTTTCCTTCCTACTTTGGTTTGAATGTCCTCTCCAAAACTCATGTTGAAATTTAATTGCCATTGTGAAGGTATTAAGAGGTGGGACTTTTAAGAGGTGATTAGGTCATGAAGGGTCTGCCCTCCCATGTGGATTAATGTCATTATCACGGGAGTGGGTTAGTTATTGCAGGAGTGGTTTCCTAATAAAAGAATAAGTTTGGGCCGGGCGAGGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3801:HG2_PB_PB10Xdip_10702:HG2_Ill_MetaSV_1619:HG2_Ill_GATKHCSBGrefine_10210:HG4_PB_pbsv_15317:HG2_PB_SVrefine2PB10Xhap12_11121:HG2_PB_SVrefine2PBcRplusDovetail_3560:HG4_PB_SVrefine2PBcRDovetail_7638;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10210:HG2_Ill_MetaSV_1619;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0405469;ClusterMaxSizeDiff=0.0405469;ClusterMaxEditDist=0.135512;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1080;DistBack=13;DistForward=265;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=303;REFWIDENED=15:52264735-52265037;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1821.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:37:0|1:24:2:0:23:./.:1:13:34:3:0/1:28:13:0/1:41:88:.:1094:.
chr15	53402322	HG4_Ill_Krunchall_21113	A	AGACTCCATGTCTAGATCAAACATTCTCATTTTTAATGAACTCTAGAAGGAAAGCAAAGAAAACACTCCAGGCTTTTG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_19282:HG4_Ill_GATKHC_24420:HG4_Ill_GATKHCSBGrefine_10551:HG3_Ill_GATKHC_24364:HG3_Ill_GATKHCSBGrefine_10115:HG2_Ill_GATKHC_24514:HG2_Ill_GATKHCSBGrefine_10212:HG4_Ill_manta_3586:HG4_Ill_Cortex_1164:HG3_Ill_manta_3452:HG3_Ill_Spiral_15899:HG3_Ill_Cortex_1214:HG2_PB_PB10Xdip_10705:HG2_PB_PB10Xdip_10704:HG2_Ill_manta_4233:HG2_Ill_SpiralSDKrefine_5521:HG2_Ill_Cortex_2844:HG2_PB_pbsv_15413:HG4_PB_pbsv_15320:HG3_PB_pbsv_15060:HG2_PB_HySA_28024:HG4_Ill_svaba_19117:HG4_Ill_Krunchall_21113:HG4_Ill_250bpfermikitraw_20128:HG4_Ill_150bpfermikitraw_19389:HG3_PB_assemblyticsfalcon_8776:HG3_Ill_svaba_19289:HG3_Ill_Krunchall_20398:HG3_Ill_250bpfermikitraw_19851:HG3_Ill_150bpfermikitraw_19313:HG2_Ill_svaba_19139:HG2_Ill_Krunchall_20795:HG2_Ill_250bpfermikitraw_20446;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19282:HG4_Ill_svaba_19117:HG4_Ill_Krunchall_21113:HG4_Ill_250bpfermikitraw_20128:HG4_Ill_150bpfermikitraw_19389:HG3_PB_assemblyticsfalcon_8776:HG3_Ill_svaba_19289:HG3_Ill_Krunchall_20398:HG3_Ill_250bpfermikitraw_19851:HG3_Ill_150bpfermikitraw_19313:HG2_Ill_svaba_19139:HG2_Ill_Krunchall_20795:HG2_Ill_250bpfermikitraw_20446;NumExactMatchSVs=13;ClusterMaxShiftDist=0.143791;ClusterMaxSizeDiff=0.12987;ClusterMaxEditDist=0.196078;PBcalls=7;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=77;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=15:53402321-53402323;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1823.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:65:1/1:2:33:1:15:1/1:0:21:0:21:1/1:0:55:./.:.:.:.:.:.
chr15	53800434	HG4_Ill_MetaSV_1680	A	AGCTGGGATTACAGGCATGTGCCACCACACTTGGCTAATTTTATATTTTTAGTAGAGATGGGGGTTTCACCACGTTGGCCAGGCTGGTCTCGTACTCCTGACCTCAGGTGATCCACCTGCTTTGGCCTCCCAAAGT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4620:HG3_PB_pbsv_15063:HG2_PB_pbsv_15415:HG2_PB_HySA_28030:HG4_PB_pbsv_15321:HG3_PB_HySA_23180:HG4_PB_HySA_22380:HG2_PB_HySA_28029:HG2_PB_SVrefine2PB10Xhap12_11126:HG4_PB_SVrefine2Falcon1Dovetail_9386:HG4_Ill_svaba_19120:HG4_Ill_MetaSV_1680:HG4_Ill_GATKHCSBGrefine_10556:HG3_Ill_svaba_19292:HG3_Ill_Spiral_15903:HG3_Ill_MetaSV_1744:HG3_Ill_GATKHCSBGrefine_10119:HG2_Ill_svaba_19141:HG2_Ill_SpiralSDKrefine_5523:HG2_Ill_MetaSV_1621:HG2_Ill_GATKHCSBGrefine_10217:HG2_10X_SVrefine210Xhap12_10651:HG2_PB_PB10Xdip_10706:HG2_PB_PB10Xdip_10707;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10651:HG2_Ill_GATKHCSBGrefine_10217:HG2_Ill_MetaSV_1621:HG2_Ill_SpiralSDKrefine_5523:HG2_Ill_svaba_19141:HG3_Ill_GATKHCSBGrefine_10119:HG3_Ill_MetaSV_1744:HG3_Ill_Spiral_15903:HG3_Ill_svaba_19292:HG4_Ill_GATKHCSBGrefine_10556:HG4_Ill_MetaSV_1680:HG4_Ill_svaba_19120:HG4_PB_SVrefine2Falcon1Dovetail_9386;NumExactMatchSVs=13;ClusterMaxShiftDist=0.168582;ClusterMaxSizeDiff=0.167939;ClusterMaxEditDist=0.235714;PBcalls=11;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=135;DistBack=11123;DistForward=24;DistMin=24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=15:53800435-53800459;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1825.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:55:./.:26:9:2:36:1|0:0:15:21:0:0/1:19:10:./.:.:.:.:.:.
chr15	53807252	HG4_Ill_150bpfermikitraw_19392	G	GTATATATATACACACATATATATGTGTATATATATGTGTGTATATATATACACACATATATATGTGTATATATATGTGTGTA	20	PASS	ClusterIDs=HG4_PB_pbsv_15322:HG4_Ill_250bpfermikitraw_20134:HG4_Ill_SVrefine2DISCOVARDovetail_10850:HG4_Ill_GATKHCSBGrefine_10557:HG3_PB_pbsv_15064:HG2_Ill_GATKHC_24517:HG2_Ill_GATKHCSBGrefine_10218:HG4_Ill_150bpfermikitraw_19392:HG3_Ill_250bpfermikitraw_19857:HG2_Ill_150bpfermikitraw_19286;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19286:HG3_Ill_250bpfermikitraw_19857:HG4_Ill_150bpfermikitraw_19392:HG4_Ill_250bpfermikitraw_20134;NumExactMatchSVs=4;ClusterMaxShiftDist=0.141176;ClusterMaxSizeDiff=0.141176;ClusterMaxEditDist=0.27933;PBcalls=2;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=82;DistBack=13;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=72;REFWIDENED=15:53807213-53807284;PctSeqSimilarity=0.9661;PctSizeSimilarity=0.9111;PctRecOverlap=0.6154;SizeDiff=-8;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=83;MatchId=1826.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:38:1|0:7:33:30:5:./.:29:1:7:13:0/1:26:12:./.:.:.:.:.:.
chr15	54165938	HG4_Ill_SVrefine2DISCOVARDovetail_10852	A	AACTCTTTTTCTAGCAGATGACTTGCATTTCTGACATTTGTTCTGATCTCCATCACCCACGTGCGGACTGAATGGGAAAGTTGTGATGGGGTGATGGTTGTAGCATAGGGGAGATGGCTTAGTCACCTCTCAAAAGACTTTTAAGAGGTATCGGATCTGCCAAGAATTTTCAGAATGCACTATTTTCAGCTGCTGGTCATTAGCTTTAAGTTCTAGTCTCTATTTAGGGAAAACAGAAAAAGTCTGAGTAAGTGTTCTTATACATTCCCAAATAAGAATATTTCTTATTTTTAAAATTATTTTTAATAGAGACGAAGTCTT	20	PASS	ClusterIDs=HG3_Ill_Spiral_15905:HG4_PB_pbsv_15323:HG3_PB_pbsv_15065:HG2_PB_pbsv_15417:HG2_PB_PB10Xdip_10709:HG2_PB_PB10Xdip_10708:HG2_PB_HySA_28034:HG4_Ill_MetaSV_1681:HG3_PB_SVrefine2PBcRDovetail_7232:HG3_Ill_SVrefine2DISCOVARDovetail_11025:HG2_Ill_SVrefine2DISCOVARplusDovetail_4223:HG2_10X_SVrefine210Xhap12_10652:HG4_PB_SVrefine2Falcon1Dovetail_9387:HG3_PB_SVrefine2Falcon1Dovetail_9338:HG2_PB_SVrefine2Falcon1plusDovetail_3805:HG4_PB_SVrefine2PBcRDovetail_7641:HG4_Ill_SVrefine2DISCOVARDovetail_10852:HG4_Ill_GATKHCSBGrefine_10559:HG3_Ill_GATKHCSBGrefine_10120:HG2_Ill_GATKHCSBGrefine_10220:HG2_PB_SVrefine2PBcRplusDovetail_3564:HG2_PB_SVrefine2PB10Xhap12_11127:HG3_Ill_MetaSV_1745:HG2_Ill_MetaSV_1622:HG2_PB_SVrefine2Falcon2Bionano_7624:HG4_PB_HySA_22388;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10220:HG3_Ill_GATKHCSBGrefine_10120:HG4_Ill_GATKHCSBGrefine_10559:HG4_Ill_SVrefine2DISCOVARDovetail_10852:HG4_PB_SVrefine2PBcRDovetail_7641;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0609756;ClusterMaxSizeDiff=0.054878;ClusterMaxEditDist=0.165165;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=320;DistBack=12275;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=15:54165939-54165941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1827.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:0:32:1:30:1/1:0:29:0:23:1/1:0:19:1/1:2:53:.:.:.
chr15	54248770	HG3_PB_SVrefine2PBcRDovetail_7234	T	TAGAACTGAAGCTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_22390:HG4_PB_pbsv_15325:HG2_PB_SVrefine2PBcRplusDovetail_3567:HG2_PB_PB10Xdip_10713:HG2_PB_PB10Xdip_10712:HG2_PB_HySA_28036:HG3_Ill_GATKHCSBGrefine_10121:HG3_PB_pbsv_15067:HG2_Ill_MetaSV_1624:HG4_Ill_MetaSV_1683:HG3_PB_SVrefine2Falcon1Dovetail_9339:HG4_PB_SVrefine2Falcon1Dovetail_9388:HG3_PB_SVrefine2PBcRDovetail_7234:HG2_PB_SVrefine2PB10Xhap12_11129:HG2_PB_SVrefine2Falcon2Bionano_7625:HG2_PB_SVrefine2PBcRplusDovetail_3566:HG2_10X_SVrefine210Xhap12_10654:HG2_PB_SVrefine2Falcon1plusDovetail_3807:HG4_PB_SVrefine2PBcRDovetail_7644:HG2_PB_pbsv_15419:HG2_PB_HySA_28035:HG3_PB_HySA_23185;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7625:HG2_PB_SVrefine2PB10Xhap12_11129:HG3_PB_SVrefine2PBcRDovetail_7234:HG4_PB_SVrefine2Falcon1Dovetail_9388;NumExactMatchSVs=4;ClusterMaxShiftDist=0.147014;ClusterMaxSizeDiff=0.143951;ClusterMaxEditDist=0.212518;PBcalls=18;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=329;DistBack=24231;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=15:54248771-54248784;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1828.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:./.:0:3:0:9:1/1:0:8:0:7:1/1:0:16:1/1:2:68:.:.:.
chr15	54895081	HG2_Ill_250bpfermikitraw_20464	T	TCATTTACAAATCCCTTCTGTACTTTATTATCTTTTTAAGAGCAAGCATTTTTCAATTGTAGATTCTCTGACAGCCTGGATTTTTCTGATTGAGGATGAACA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4621:HG4_PB_pbsv_15328:HG4_PB_SVrefine2Falcon1Dovetail_9392:HG3_PB_pbsv_15070:HG2_PB_pbsv_15421:HG4_Ill_svaba_19136:HG4_Ill_manta_3588:HG4_Ill_GATKHCSBGrefine_10564:HG4_Ill_Cortex_1167:HG3_Ill_svaba_19305:HG3_Ill_manta_3453:HG3_Ill_Spiral_15912:HG3_Ill_SVrefine2DISCOVARDovetail_11030:HG3_Ill_MetaSV_1747:HG3_Ill_GATKHCSBGrefine_10124:HG3_Ill_Cortex_1219:HG2_PB_SVrefine2PBcRplusDovetail_3569:HG2_PB_SVrefine2PB10Xhap12_11131:HG2_PB_SVrefine2Falcon2Bionano_7627:HG2_PB_SVrefine2Falcon1plusDovetail_3808:HG2_Ill_svaba_19159:HG2_Ill_manta_4234:HG2_Ill_SpiralSDKrefine_5538:HG2_Ill_SVrefine2DISCOVARplusDovetail_4225:HG2_Ill_MetaSV_1625:HG2_Ill_GATKHC_24536:HG2_Ill_GATKHCSBGrefine_10221:HG2_Ill_Cortex_2851:HG2_Ill_250bpfermikitraw_20464:HG2_Ill_150bpfermikitraw_19302:HG2_10X_SVrefine210Xhap12_10658:HG2_PB_HySA_28043:HG2_PB_PB10Xdip_10717:HG2_PB_PB10Xdip_10716;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10658:HG2_Ill_150bpfermikitraw_19302:HG2_Ill_250bpfermikitraw_20464:HG2_Ill_Cortex_2851:HG2_Ill_GATKHCSBGrefine_10221:HG2_Ill_GATKHC_24536:HG2_Ill_MetaSV_1625:HG2_Ill_SVrefine2DISCOVARplusDovetail_4225:HG2_Ill_SpiralSDKrefine_5538:HG2_Ill_manta_4234:HG2_Ill_svaba_19159:HG2_PB_SVrefine2Falcon1plusDovetail_3808:HG2_PB_SVrefine2Falcon2Bionano_7627:HG2_PB_SVrefine2PB10Xhap12_11131:HG2_PB_SVrefine2PBcRplusDovetail_3569:HG3_Ill_Cortex_1219:HG3_Ill_GATKHCSBGrefine_10124:HG3_Ill_MetaSV_1747:HG3_Ill_SVrefine2DISCOVARDovetail_11030:HG3_Ill_Spiral_15912:HG3_Ill_manta_3453:HG3_Ill_svaba_19305:HG4_Ill_Cortex_1167:HG4_Ill_GATKHCSBGrefine_10564:HG4_Ill_manta_3588:HG4_Ill_svaba_19136:HG4_PB_SVrefine2Falcon1Dovetail_9392;NumExactMatchSVs=27;ClusterMaxShiftDist=0.103774;ClusterMaxSizeDiff=0.0943396;ClusterMaxEditDist=0.224299;PBcalls=11;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=101;DistBack=49939;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=15:54895082-54895083;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1829.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:79:./.:0:0:0:0:1/1:1:21:0:10:1/1:0:48:./.:.:.:.:.:.
chr15	55593664	HG2_PB_SVrefine2Falcon1plusDovetail_3813	T	TAAAAGTGTACAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_15076:HG2_Ill_breakscan11_4622:HG2_Ill_MetaSV_1628:HG2_PB_pbsv_15426:HG3_PB_SVrefine2PBcRDovetail_7240:HG2_PB_SVrefine2Falcon1plusDovetail_3813:HG2_PB_SVrefine2Falcon2Bionano_7631;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3813;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0864;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.220155;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=307;DistBack=83781;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=15:55593665-55593678;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9935;PctRecOverlap=0.9935;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1830.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:41:0|1:29:0:0:35:./.:31:0:0:2:0/1:28:9:0/1:9:29:.:.:.
chr15	55595465	HG2_PB_SVrefine2Falcon1plusDovetail_3814	C	CAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7632:HG3_PB_SVrefine2PBcRDovetail_7241:HG2_PB_SVrefine2Falcon1plusDovetail_3814:HG2_PB_pbsv_15428:HG3_PB_pbsv_15077;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3814;NumExactMatchSVs=1;ClusterMaxShiftDist=0.107692;ClusterMaxSizeDiff=0.107692;ClusterMaxEditDist=0.253846;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=125;DistBack=17;DistForward=75842;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=618;REFWIDENED=15:55595290-55595907;PctSeqSimilarity=0.8344;PctSizeSimilarity=0.7062;PctRecOverlap=0.7062;SizeDiff=-52;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=74;MatchId=1831.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:27:0|1:30:2:3:24:./.:2:0:0:0:0/0:15:0:./.:.:.:.:.:.
chr15	55671321	HG4_PB_HySA_22398	T	TTCACGCTGTAATCCCAGCACTTTGGAGGCCGAAGCGGGCGGATCACGAGGTCAGGAGATCGAGACATCCTGGGTAACACTGGAAACCCTCTCTACTAAAAAATAAAAAAATTAGCCGGGCGTGGCGGGCGCCTGTAGTCCAGCTACTCCGGAGGCTGAGGCAGTGAAATGGCTGACTCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGACTCCAGCTGGACGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGAAAACCGTTGC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7648:HG4_PB_HySA_22398:HG2_PB_pbsv_15429:HG4_PB_pbsv_15336:HG2_PB_HySA_28048:HG2_PB_SVrefine2PBcRplusDovetail_3572:HG2_PB_SVrefine2PB10Xhap12_11134:HG4_PB_SVrefine2Falcon1Dovetail_9396;NumClusterSVs=8;ExactMatchIDs=HG4_PB_HySA_22398;NumExactMatchSVs=1;ClusterMaxShiftDist=0.156202;ClusterMaxSizeDiff=0.156202;ClusterMaxEditDist=0.205207;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=300;DistBack=-1;DistForward=9944;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=15:55671310-55671324;PctSeqSimilarity=0.9349;PctSizeSimilarity=0.8929;PctRecOverlap=0.8902;SizeDiff=-36;StartDistance=19;EndDistance=19;GTMatch=0;TruScore=90;MatchId=1832.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:0|1:24:2:0:22:./.:2:0:31:0:./.:21:2:0/1:12:17:.:.:.
chr15	56104910	HG2_Ill_GATKHCSBGrefine_10225	A	ACCCAGGCTGGAGTGCAGTGGTGTGATCTCGACTCACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTAAAGGCGCATGCCACCACTCCTGGCTAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9347:HG4_PB_pbsv_15340:HG3_PB_pbsv_15078:HG4_PB_HySA_22404:HG2_PB_HySA_28057:HG4_Ill_MetaSV_1687:HG4_Ill_GATKHCSBGrefine_10569:HG3_Ill_MetaSV_1750:HG2_Ill_GATKHCSBGrefine_10225:HG2_PB_pbsv_15431:HG4_PB_SVrefine2Falcon1Dovetail_9398;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10225:HG3_Ill_MetaSV_1750:HG4_Ill_GATKHCSBGrefine_10569:HG4_Ill_MetaSV_1687;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0569801;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.185393;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=171;DistBack=-145;DistForward=19;DistMin=-145;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=184;REFWIDENED=15:56104872-56105055;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9942;PctRecOverlap=0.9884;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1834.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:28:0|1:26:0:1:28:1|0:1:9:21:0:0/1:22:7:./.:.:.:.:.:.
chr15	56833920	HG4_Ill_GATKHCSBGrefine_10575	T	TAAAAAGTGCTCATCATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAATAGCCGGGCGTGATGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGACCCGAGATTGCGCCACTGCACTCCCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_15343:HG3_PB_pbsv_15082:HG2_PB_pbsv_15435:HG3_PB_HySA_23216:HG4_PB_SVrefine2PBcRDovetail_7650:HG4_PB_SVrefine2Falcon1Dovetail_9400:HG3_PB_SVrefine2Falcon1Dovetail_9349:HG4_Ill_MetaSV_1688:HG4_Ill_GATKHCSBGrefine_10575:HG2_Ill_MetaSV_1629:HG3_PB_SVrefine2PBcRDovetail_7243:HG2_PB_SVrefine2Falcon2Bionano_7635:HG2_PB_SVrefine2PBcRplusDovetail_3575:HG2_PB_SVrefine2PB10Xhap12_11139:HG2_PB_SVrefine2Falcon1plusDovetail_3817:HG2_Ill_GATKHCSBGrefine_10227:HG2_PB_PB10Xdip_10726:HG2_PB_PB10Xdip_10725;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_MetaSV_1629:HG4_Ill_GATKHCSBGrefine_10575:HG4_Ill_MetaSV_1688;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0678514;ClusterMaxSizeDiff=0.0678514;ClusterMaxEditDist=0.208531;PBcalls=14;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=298;DistBack=2297;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=15:56833921-56833937;PctSeqSimilarity=0.99;PctSizeSimilarity=0.9868;PctRecOverlap=0.9868;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1835.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:27:0:17:./.:0:4:0:2:1/1:0:20:./.:.:.:.:.:.
chr15	57116928	HG2_Ill_GATKHC_24561	A	AGGGGAGGCCAGAACAACAGCCACTCAGAACTTCAAAATGAATCGTCAGTACAGAGGAGCAAGACAGAGAAAAAGAATCTAGGCCAGGTGT	20	PASS	ClusterIDs=HG3_PB_pbsv_15084:HG2_PB_pbsv_15438:HG2_PB_HySA_28069:HG3_PB_HySA_23219:HG2_PB_SVrefine2Falcon1plusDovetail_3818:HG4_Ill_manta_3592:HG3_PB_SVrefine2PBcRDovetail_7244:HG3_PB_SVrefine2Falcon1Dovetail_9351:HG3_Ill_Spiral_15930:HG3_Ill_SVrefine2DISCOVARDovetail_11043:HG2_PB_SVrefine2PBcRplusDovetail_3576:HG2_PB_SVrefine2PB10Xhap12_11140:HG2_Ill_SVrefine2DISCOVARplusDovetail_4236:HG2_10X_SVrefine210Xhap12_10664:HG4_PB_SVrefine2PBcRDovetail_7651:HG4_PB_SVrefine2Falcon1Dovetail_9401:HG4_Ill_SVrefine2DISCOVARDovetail_10870:HG4_Ill_Krunchall_21153:HG4_Ill_GATKHCSBGrefine_10579:HG4_Ill_250bpfermikitraw_20173:HG3_Ill_manta_3457:HG3_Ill_Krunchall_20441:HG3_Ill_GATKHC_24407:HG3_Ill_GATKHCSBGrefine_10127:HG3_Ill_250bpfermikitraw_19895:HG2_PB_SVrefine2Falcon2Bionano_7636:HG2_Ill_manta_4238:HG2_Ill_Krunchall_20838:HG2_Ill_GATKHC_24561:HG2_Ill_GATKHCSBGrefine_10229:HG2_Ill_250bpfermikitraw_20488:HG2_PB_PB10Xdip_10728:HG2_PB_PB10Xdip_10727:HG4_PB_pbsv_15345;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20488:HG2_Ill_GATKHCSBGrefine_10229:HG2_Ill_GATKHC_24561:HG2_Ill_Krunchall_20838:HG2_Ill_manta_4238:HG2_PB_SVrefine2Falcon2Bionano_7636:HG3_Ill_250bpfermikitraw_19895:HG3_Ill_GATKHCSBGrefine_10127:HG3_Ill_GATKHC_24407:HG3_Ill_Krunchall_20441:HG3_Ill_manta_3457:HG4_Ill_250bpfermikitraw_20173:HG4_Ill_GATKHCSBGrefine_10579:HG4_Ill_Krunchall_21153:HG4_Ill_SVrefine2DISCOVARDovetail_10870:HG4_PB_SVrefine2Falcon1Dovetail_9401:HG4_PB_SVrefine2PBcRDovetail_7651;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0752688;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.252632;PBcalls=15;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=90;DistBack=41577;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=15:57116929-57116930;PctSeqSimilarity=0.9945;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1836.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:2:28:0:15:1/1:0:25:0:41:1/1:0:42:./.:.:.:.:.:.
chr15	57567525	HG2_Ill_SVrefine2DISCOVARplusDovetail_4242	G	GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGTGTACGTATGTAGAGATGGTCTCACTGTGTGTGTGTGTGTGTGT	20	PASS	ClusterIDs=HG4_PB_HySA_22417:HG3_PB_HySA_23225:HG2_PB_pbsv_15439:HG2_PB_PB10Xdip_10729:HG2_PB_PB10Xdip_10730:HG3_PB_pbsv_15085:HG3_PB_SVrefine2PBcRDovetail_7245:HG2_PB_HySA_28076:HG4_PB_pbsv_15346:HG2_PB_SVrefine2PBcRplusDovetail_3577:HG3_Ill_150bpfermikitraw_19358:HG2_PB_SVrefine2Falcon2Bionano_7637:HG4_PB_SVrefine2PBcRDovetail_7652:HG3_Ill_SVrefine2DISCOVARDovetail_11048:HG2_Ill_SVrefine2DISCOVARplusDovetail_4242:HG4_Ill_GATKHC_24478:HG4_Ill_GATKHCSBGrefine_10580:HG2_PB_SVrefine2PB10Xhap12_11141:HG3_PB_SVrefine2Falcon1Dovetail_9352:HG2_Ill_GATKHCSBGrefine_10230:HG4_PB_SVrefine2Falcon1Dovetail_9402:HG2_PB_SVrefine2Falcon1plusDovetail_3819;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4242:HG4_PB_SVrefine2PBcRDovetail_7652;NumExactMatchSVs=2;ClusterMaxShiftDist=0.361446;ClusterMaxSizeDiff=0.361446;ClusterMaxEditDist=0.361446;PBcalls=16;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=79;DistBack=5966;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=63;REFWIDENED=15:57567526-57567588;PctSeqSimilarity=0.9211;PctSizeSimilarity=0.8987;PctRecOverlap=0.8987;SizeDiff=8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=1837.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:1/1:2:24:0:17:./.:3:32:3:32:./.:2:16:./.:.:.:.:.:.
chr15	58568546	HG3_PB_SVrefine2Falcon1Dovetail_9354	G	GAGATATACATATCTCTCTATACATATAGAGAGAGATATACATATCTCTCTATACATATAGAGAGAGATATACATATCTCTCTATACATATAGAGAGAGATATACATATCTCTCTATACTAT	20	PASS	ClusterIDs=HG4_PB_HySA_22431:HG3_PB_SVrefine2Falcon1Dovetail_9354:HG4_PB_SVrefine2Falcon1Dovetail_9404:HG2_PB_HySA_28087:HG2_Ill_SVrefine2DISCOVARplusDovetail_4245:HG2_PB_SVrefine2PB10Xhap12_11144:HG2_PB_pbsv_15441:HG4_PB_pbsv_15349:HG2_PB_HySA_28086;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9354;NumExactMatchSVs=1;ClusterMaxShiftDist=0.123077;ClusterMaxSizeDiff=0.123077;ClusterMaxEditDist=0.2;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=121;DistBack=16;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=15:58568461-58568573;PctSeqSimilarity=0.9619;PctSizeSimilarity=0.9167;PctRecOverlap=0.8271;SizeDiff=-11;StartDistance=17;EndDistance=17;GTMatch=0;TruScore=90;MatchId=1838.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:51:./.:18:33:14:7:./.:6:29:21:1:0/1:20:5:./.:.:.:.:.:.
chr15	59169389	HG3_PB_pbsv_15091	A	ATTTTTTTTTTTTCTTTTTTTTTTTTTTTTGAGACGGAAGTCTCGGCTCATGATCGCCCAGCTGGAGTGCATGGCGCGATCTCGGCTCACTGCAAGTCCGCCTCCCGAGGTTCACGGCCATTCTCCCTGCCTCAGCCCTCCCGAGTAGCTGGACGACTACAGAGCGACCCGCTCCACGCCCGGGCTAATTTTTTGTAATTTTTAGTAGAACGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGGATCCCGCCCGCTCGGCTCCAAAGTGTGGATTACAGGGTTGAGCCACGCGCGCCCGCCAGCTTTTTAATTTTATTTT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4623:HG3_PB_pbsv_15091:HG2_PB_pbsv_15445:HG2_PB_SVrefine2Falcon1plusDovetail_3824:HG3_PB_SVrefine2Falcon1Dovetail_9357:HG2_PB_SVrefine2Falcon2Bionano_7643;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_15091;NumExactMatchSVs=1;ClusterMaxShiftDist=0.175041;ClusterMaxSizeDiff=0.171799;ClusterMaxEditDist=0.230146;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=334;DistBack=14;DistForward=5001;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:59169390-59169389;PctSeqSimilarity=0.9471;PctSizeSimilarity=0.9731;PctRecOverlap=0.9284;SizeDiff=9;StartDistance=19;EndDistance=19;GTMatch=0;TruScore=94;MatchId=1839.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:39:./.:1:17:18:6:./.:14:0:1:10:0/1:28:7:0/1:8:9:.:.:.
chr15	59725444	HG2_Ill_GATKHCSBGrefine_10236	C	CAGGCGTTCAGGACCAGCCTGACCAACATGGTGAAACCCTGACTCTACTAAAAATTACAAAAATTAGCCAGGTGTGGTGGCACGCGCCTATAATCCCAGCTACTCGGGAGGCTGAGGAAGGAGAATTTCTTGAACCCGGGAGGTGGAGATTACAGTGAGCCAAGATTGCACCATTGCACTCCAGCCTGAGCAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAAAAAAGAAAGAAATTGATGCAAAACATCCATGATTAATAAAAAATGAAAATTTTCAATAAGGACAGGGTCAGTATTCCTAATTTTCTTTGCCTGGCTTCAATATGTCTTGCTATGGCACTGTATACCACAACCTCATGTGATGGGTATTGTCATTTCTTTTTTGTTGTTGAACAGAAGTTCAAGTTGTCTTTTAATTCAACCTATGAGAACAACTGTCTGATAATGTATTACTTGACAAAGAAGCCAAAACAAGAGTGTCAGCTTATGTGAGGTTTCATTGTCTAAACTGTGGTGTCATGACTGGCTAATGTAAGGTAGGCCATGAATGTTTGCTGAACTAGATTGAACCGAGCCAAAGTGGTATCAAAGTTCAGAACAGCCTGAAGACTATATATGTGTGTATTTTATATATATATATATATATATATATGTCTATTTCCTGAGAATTGTTGGAAAGAAGAATTGTTTCAAAATCAATGTGAAATAGAATTTTCCATTACTTTTCTTGCCTCTGAACTGGGTTTTGGATAAATCAGTTTTATTATA	20	PASS	ClusterIDs=HG3_PB_HySA_23254:HG4_PB_SVrefine2PBcRDovetail_7658:HG3_PB_pbsv_15094:HG2_PB_PB10Xdip_10734:HG2_PB_pbsv_15447:HG2_Ill_breakscan11_4624:HG4_PB_HySA_22442:HG2_PB_HySA_28104:HG4_Ill_SVrefine2DISCOVARDovetail_10885:HG4_Ill_MetaSV_1694:HG4_Ill_GATKHCSBGrefine_10586:HG3_Ill_MetaSV_1755:HG3_Ill_GATKHCSBGrefine_10133:HG2_PB_SVrefine2Falcon2Bionano_7645:HG2_Ill_GATKHCSBGrefine_10236:HG2_PB_SVrefine2PBcRplusDovetail_3585:HG3_PB_SVrefine2PBcRDovetail_7251:HG2_PB_SVrefine2PB10Xhap12_11149:HG2_PB_SVrefine2Falcon1plusDovetail_3826;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10236:HG2_PB_SVrefine2Falcon2Bionano_7645:HG3_Ill_GATKHCSBGrefine_10133:HG3_Ill_MetaSV_1755:HG4_Ill_GATKHCSBGrefine_10586:HG4_Ill_MetaSV_1694:HG4_Ill_SVrefine2DISCOVARDovetail_10885;NumExactMatchSVs=7;ClusterMaxShiftDist=0.108143;ClusterMaxSizeDiff=0.108143;ClusterMaxEditDist=0.145928;PBcalls=12;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=771;DistBack=11347;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=15:59725445-59725448;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1841.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:./.:12:43:0|1:10:0:0:31:0|1:27:0:1:16:0/1:25:10:0/1:13:63:.:.:.
chr15	60061407	HG4_Ill_GATKHCSBGrefine_10588	A	AAGAAAGTATGAATCAGCACAGATTTTAGAGTACAATTTAATAATACGTGTTCAAATCATAGAAGAT	20	PASS	ClusterIDs=HG3_Ill_GATKHCSBGrefine_10137:HG4_PB_assemblyticsfalcon_8721:HG4_PB_pbsv_15355:HG4_Ill_GATKHC_24506:HG3_PB_HySA_23257:HG4_Ill_GATKHCSBGrefine_10588:HG2_Ill_manta_4244:HG2_Ill_GATKHC_24590:HG2_Ill_GATKHCSBGrefine_10237:HG2_Ill_150bpfermikitraw_19354:HG3_PB_assemblyticsfalcon_8841:HG4_Ill_svaba_19187:HG2_Ill_svaba_19213:HG2_PB_PB10Xdip_10736:HG2_PB_PB10Xdip_10735:HG4_Ill_manta_3599:HG4_Ill_150bpfermikitraw_19463;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19354:HG2_Ill_GATKHCSBGrefine_10237:HG2_Ill_GATKHC_24590:HG2_Ill_manta_4244:HG4_Ill_GATKHCSBGrefine_10588:HG4_Ill_GATKHC_24506;NumExactMatchSVs=6;ClusterMaxShiftDist=0.12766;ClusterMaxSizeDiff=0.12766;ClusterMaxEditDist=0.22069;PBcalls=6;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=7526;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=15:60061406-60061409;PctSeqSimilarity=0.9437;PctSizeSimilarity=0.8919;PctRecOverlap=0.8933;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=1842.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:0:23:1:22:1/1:1:27:1:15:1/1:0:16:./.:.:.:.:.:.
chr15	60657243	HG2_PB_SVrefine2Falcon2Bionano_7649	A	ATGGCAGTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCTCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	10	PASS	ClusterIDs=HG2_PB_pbsv_15452:HG4_PB_pbsv_15359:HG4_PB_HySA_22452:HG3_PB_assemblyticsfalcon_8848:HG3_PB_SVrefine2Falcon1Dovetail_9363:HG4_PB_SVrefine2Falcon1Dovetail_9413:HG4_PB_SVrefine2PBcRDovetail_7662:HG2_PB_SVrefine2Falcon2Bionano_7649:HG2_PB_SVrefine2PBcRplusDovetail_3589:HG4_PB_HySA_22451:HG2_PB_HySA_28119:HG2_PB_SVrefine2Falcon1plusDovetail_3831:HG3_PB_pbsv_15099;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7649:HG4_PB_SVrefine2PBcRDovetail_7662;NumExactMatchSVs=2;ClusterMaxShiftDist=0.114977;ClusterMaxSizeDiff=0.114977;ClusterMaxEditDist=0.215976;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=330;DistBack=0;DistForward=10;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=15:60657244-60657259;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1844.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:52:0|1:36:1:2:41:./.:0:5:17:0:0/1:33:8:0/1:4:27:.:.:.
chr15	61216532	HG2_Ill_MetaSV_1638	T	TAAGAAATGTTCTGGCCGGGCGCGGTGGCTCACGCCTGTCAACCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGACACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAGAAAAAAAAGAAAGAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10745:HG4_PB_assemblyticsfalcon_8739:HG3_PB_pbsv_15105:HG2_PB_pbsv_15456:HG3_PB_assemblyticsfalcon_8859:HG3_PB_HySA_23277:HG4_PB_pbsv_15364:HG2_10X_SVrefine210Xhap12_10683:HG2_Ill_SVrefine2DISCOVARplusDovetail_4258:HG4_PB_SVrefine2PBcRDovetail_7665:HG2_PB_SVrefine2Falcon2Bionano_7652:HG4_Ill_MetaSV_1698:HG4_PB_SVrefine2Falcon1Dovetail_9418:HG3_PB_SVrefine2Falcon1Dovetail_9367:HG2_PB_SVrefine2Falcon1plusDovetail_3833:HG2_Ill_manta_4247:HG2_Ill_MetaSV_1638:HG2_Ill_GATKHCSBGrefine_10240:HG3_PB_SVrefine2PBcRDovetail_7256:HG3_Ill_MetaSV_1758:HG3_Ill_GATKHCSBGrefine_10142:HG2_PB_SVrefine2PBcRplusDovetail_3591:HG2_PB_SVrefine2PB10Xhap12_11156:HG4_PB_HySA_22455:HG2_PB_PB10Xdip_10746;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10240:HG2_Ill_MetaSV_1638:HG2_Ill_manta_4247:HG2_PB_SVrefine2Falcon1plusDovetail_3833;NumExactMatchSVs=4;ClusterMaxShiftDist=0.153139;ClusterMaxSizeDiff=0.153139;ClusterMaxEditDist=0.217458;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=326;DistBack=13242;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=15:61216533-61216544;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9939;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1845.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:98:1/1:1:46:1:33:./.:0:2:0:7:1/1:0:17:1/1:2:50:.:.:.
chr15	61640647	HG3_Ill_Spiral_15966	A	ACCTTCAACCAGATGTTGAGCTTCTTCAAATTGAGACATTGCTCTCACTTTTAAAATACTCCCTGCATGGGTATACATGTGCCGTGGTGGTTTGCTCGTATATCTATGCAGGGAGTATTTTAAAAGTGAGAGCAATGTCTCAATTTAAAGAAGCTCAACATCTGGTTGAAGGTGATTTTCCCTTCC	20	PASS	ClusterIDs=HG3_PB_HySA_23283:HG3_PB_assemblyticsfalcon_8867:HG4_PB_pbsv_15368:HG3_PB_pbsv_15107:HG4_PB_assemblyticsfalcon_8744:HG2_PB_pbsv_15459:HG2_PB_PB10Xdip_10750:HG2_Ill_breakscan11_4625:HG4_PB_SVrefine2PBcRDovetail_7668:HG4_PB_SVrefine2Falcon1Dovetail_9420:HG4_Ill_svaba_19198:HG4_Ill_manta_3601:HG4_Ill_SVrefine2DISCOVARDovetail_10894:HG4_Ill_MetaSV_1699:HG4_Ill_GATKHCSBGrefine_10590:HG4_Ill_250bpfermikitraw_20215:HG4_Ill_150bpfermikitraw_19473:HG3_PB_SVrefine2PBcRDovetail_7258:HG3_Ill_svaba_19368:HG3_Ill_manta_3464:HG3_Ill_Spiral_15966:HG3_Ill_SVrefine2DISCOVARDovetail_11064:HG3_Ill_MetaSV_1759:HG3_Ill_GATKHCSBGrefine_10143:HG3_Ill_250bpfermikitraw_19938:HG2_PB_SVrefine2PBcRplusDovetail_3594:HG2_PB_SVrefine2PB10Xhap12_11160:HG2_PB_SVrefine2Falcon2Bionano_7654:HG2_PB_SVrefine2Falcon1plusDovetail_3836:HG2_Ill_svaba_19225:HG2_Ill_manta_4248:HG2_Ill_SpiralSDKrefine_5585:HG2_Ill_SVrefine2DISCOVARplusDovetail_4260:HG2_Ill_MetaSV_1639:HG2_Ill_GATKHCSBGrefine_10241:HG2_Ill_250bpfermikitraw_20536:HG2_Ill_150bpfermikitraw_19371:HG3_PB_SVrefine2Falcon1Dovetail_9369:HG2_PB_HySA_28135;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19371:HG2_Ill_250bpfermikitraw_20536:HG2_Ill_GATKHCSBGrefine_10241:HG2_Ill_MetaSV_1639:HG2_Ill_SVrefine2DISCOVARplusDovetail_4260:HG2_Ill_SpiralSDKrefine_5585:HG2_Ill_manta_4248:HG2_Ill_svaba_19225:HG2_PB_SVrefine2Falcon1plusDovetail_3836:HG2_PB_SVrefine2Falcon2Bionano_7654:HG2_PB_SVrefine2PB10Xhap12_11160:HG2_PB_SVrefine2PBcRplusDovetail_3594:HG3_Ill_250bpfermikitraw_19938:HG3_Ill_GATKHCSBGrefine_10143:HG3_Ill_MetaSV_1759:HG3_Ill_SVrefine2DISCOVARDovetail_11064:HG3_Ill_Spiral_15966:HG3_Ill_manta_3464:HG3_Ill_svaba_19368:HG3_PB_SVrefine2PBcRDovetail_7258:HG4_Ill_150bpfermikitraw_19473:HG4_Ill_250bpfermikitraw_20215:HG4_Ill_GATKHCSBGrefine_10590:HG4_Ill_MetaSV_1699:HG4_Ill_SVrefine2DISCOVARDovetail_10894:HG4_Ill_manta_3601:HG4_Ill_svaba_19198:HG4_PB_SVrefine2Falcon1Dovetail_9420:HG4_PB_SVrefine2PBcRDovetail_7668;NumExactMatchSVs=29;ClusterMaxShiftDist=0.170799;ClusterMaxSizeDiff=0.170799;ClusterMaxEditDist=0.264045;PBcalls=16;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=185;DistBack=12614;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=15:61640648-61640653;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1846.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:./.:0:3:1:28:1/1:0:9:0:6:1/1:0:24:./.:.:.:.:.:.
chr15	62030239	HG2_Ill_GATKHCSBGrefine_10242	A	AAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_15460:HG4_Ill_Krunchall_21205:HG4_Ill_GATKHC_24521:HG4_Ill_GATKHCSBGrefine_10591:HG4_Ill_250bpfermikitraw_20218:HG4_Ill_150bpfermikitraw_19476:HG2_Ill_Krunchall_20891:HG2_Ill_GATKHCSBGrefine_10242:HG2_Ill_250bpfermikitraw_20539:HG2_Ill_150bpfermikitraw_19374:HG4_PB_HySA_22465;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19374:HG2_Ill_250bpfermikitraw_20539:HG2_Ill_GATKHCSBGrefine_10242:HG2_Ill_Krunchall_20891:HG4_Ill_150bpfermikitraw_19476:HG4_Ill_250bpfermikitraw_20218:HG4_Ill_GATKHCSBGrefine_10591:HG4_Ill_GATKHC_24521:HG4_Ill_Krunchall_21205;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0441176;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.132353;PBcalls=2;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=-1;DistForward=18;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=15:62030229-62030267;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1847.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:36:0|1:33:2:2:28:./.:2:9:13:0:0/1:21:8:./.:.:.:.:.:.
chr15	62169639	HG4_PB_pbsv_15370	A	AAACATAACCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTATTATAACTCCTAAGTTTTAGGTACATGTGAAG	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_8745:HG2_PB_pbsv_15461:HG4_PB_pbsv_15370:HG3_PB_pbsv_15109:HG4_Ill_GATKHC_24522:HG3_Ill_GATKHCSBGrefine_10145;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_15370;NumExactMatchSVs=1;ClusterMaxShiftDist=0.195652;ClusterMaxSizeDiff=0.195652;ClusterMaxEditDist=0.244681;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=89;DistBack=1;DistForward=5;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:62169640-62169639;PctSeqSimilarity=0.95;PctSizeSimilarity=0.9551;PctRecOverlap=0.9551;SizeDiff=4;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=95;MatchId=1848.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:40:0|1:35:5:2:34:1|0:0:24:32:0:./.:40:3:./.:.:.:.:.:.
chr15	62318265	HG2_Ill_GATKHCSBGrefine_10243	T	TGAGATATGTTGTTTTTTTTTGTTTTTTTTGTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGTGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10754:HG2_PB_pbsv_15462:HG4_PB_pbsv_15371:HG4_PB_assemblyticsfalcon_8746:HG2_PB_SVrefine2PB10Xhap12_11163:HG3_PB_pbsv_15110:HG2_PB_SVrefine2PBcRplusDovetail_3596:HG3_PB_SVrefine2PBcRDovetail_7259:HG4_PB_SVrefine2Falcon1Dovetail_9421:HG4_Ill_MetaSV_1700:HG4_Ill_GATKHCSBGrefine_10592:HG3_Ill_MetaSV_1760:HG3_Ill_GATKHCSBGrefine_10146:HG2_Ill_MetaSV_1640:HG2_Ill_GATKHCSBGrefine_10243:HG4_Ill_manta_3602:HG2_PB_SVrefine2Falcon1plusDovetail_3838:HG3_PB_SVrefine2Falcon1Dovetail_9370:HG4_PB_HySA_22466:HG2_PB_HySA_28138:HG2_Ill_breakscan11_4626:HG3_PB_HySA_23287:HG2_PB_PB10Xdip_10753;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10243:HG2_Ill_MetaSV_1640:HG3_Ill_GATKHCSBGrefine_10146:HG3_Ill_MetaSV_1760:HG4_Ill_GATKHCSBGrefine_10592;NumExactMatchSVs=5;ClusterMaxShiftDist=0.237942;ClusterMaxSizeDiff=0.237942;ClusterMaxEditDist=0.276083;PBcalls=15;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=328;DistBack=117211;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=15:62318266-62318280;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1849.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:63:0|1:26:1:2:48:1|0:0:21:33:0:0/1:28:13:0/1:10:21:.:.:.
chr15	63086025	HG2_PB_SVrefine2Falcon1plusDovetail_3841	T	TAGAAACTTGGCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_pbsv_15466:HG3_PB_pbsv_15115:HG3_PB_SVrefine2Falcon1Dovetail_9374:HG2_PB_assemblyticsfalcon_8906:HG2_PB_SVrefine2Falcon1plusDovetail_3841:HG3_PB_SVrefine2PBcRDovetail_7262:HG2_PB_HySA_28140:HG3_PB_HySA_23295;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3841;NumExactMatchSVs=1;ClusterMaxShiftDist=0.130303;ClusterMaxSizeDiff=0.130303;ClusterMaxEditDist=0.20303;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=324;DistBack=20521;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=15:63086026-63086037;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1850.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:1|0:0:15:25:1:0|1:6:0:0:5:0/1:25:16:0/1:9:26:.:.:.
chr15	63287082	HG2_Ill_GATKHCSBGrefine_10249	C	CCGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGTCTACT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7659:HG3_PB_pbsv_15117:HG2_Ill_MetaSV_1644:HG2_Ill_GATKHCSBGrefine_10249:HG2_PB_HySA_28144:HG2_Ill_breakscan11_4627:HG2_PB_pbsv_15468:HG2_PB_assemblyticsfalcon_8911:HG2_PB_SVrefine2Falcon1plusDovetail_3843:HG3_PB_HySA_23300;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10249:HG2_Ill_MetaSV_1644;NumExactMatchSVs=2;ClusterMaxShiftDist=0.186441;ClusterMaxSizeDiff=0.183051;ClusterMaxEditDist=0.26455;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=15:63287072-63287086;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1851.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:35:1|0:1:21:25:1:0|1:16:0:1:9:0/1:19:11:0/1:7:36:.:.:.
chr15	63770038	HG2_PB_pbsv_15470	A	AAAGAAGAGTGCGGAGCCGGGAAAAGTCGCGGCGCTGACGCCCGCGGGCCCAGCTGCAGATATGAAGCGGAGGCCGCTGCCGCGACGACCGCAGCCGCCGCCGCCGCGACTGCAGGCCGCCGCCGCGCGCCGACGGCCGGAGGATGAGTTCAGCGGGCAGCGGAGCTGTCCTCAGTCTTTGCCGCCGCGCGCGGGAGCGCGCCCGAGGCAGCGGCTGGAGGAGCGGACGGCCCCGCGGGGCGCGAGGGCCAAGGAGGGCAGCCGGCCGCCTTGGGCCTCAAAGTGCCGAGATTGGCAGCCTGCGCCGGCCGCCACCGTCTGGGAAGTTGAGGAATGTGTCTCTGCCTGGCGCCATCGTCTGGGATGTTGAAGGAGGCCCCTCTGGCCTGGCTGCCAGATACATAGGAAGTGGAGGAGCGTCTGCGCCCGCGCGCCATCGCCTCTAGGAAAGTGAGGAAGCGCCTCTTCCAGCCGCACAACACATCTAGGAAGTGAGGAGCGTTTGCCGGCGCGCATGGTCTGAGATGTGGGGACGGCCTCTGCCCGCCGCCCATTGGGATGTGAGGAGCGCCTCTGCCACGCCGAGACCGTCTGGGAGGTGAGGAGCGTCTCTTGCGCCTGGCCCGCCCGTCTGAGAAGTGAGGAGACCGCTCTGCCTGGCAACCACCGTCCTGAAGAAGTGAGGAAGCCCTCCGCCGGCAAGCTTGCCCGCGTCTGAGAGTGAGGAAGCCTCTCCGCGCGCAGCCACCCATCTGGGAAGTGAGGAGCGTCTCCGACCCGCCAGGCCACCCGTCCGTGAGGGAGGTTGGGGGGTTCCACGCCCCCGCCCGGACAGCCGCCCATCCGGGAGGGAGTGGGGGTCAGCCCCCCGCCTAGCCAGCCGTGCCGTCCGGGAGGGGGAGGGTGGGGGATCAGCCCCCGCCCCTAGGCATCCGTGGCGTCCGGGAGGGGAAAGGTGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCTACTGTGAAGTGAGGAGCCCCTCAGCCCGGACGCGCCCGTGCGGTGACGGGAGGTGGGGGGTCAGCCCCCGCTGGCCACCGCCCCCGTCCGGGAGGAGGTGGGGGGTCAGGTCCCTCCCCCATTGGTTTGTTGTTGCCAGTCCGGGGCTGTCTTGCCGTCTGTGGAGGATGAGGGGCCGCCAAAATAGAAAATAATTGACCGTCATGTTTCTTTGGCAGCACGTTGTCTTCTGTGATATTGGTATAGTGTGTTATAGAGCGGCGCTTGTCTATCTTGTCCGCCATGTCGCCCCGTCTCGGAAGGAGGGTGTGGGGCAGCAAACCGCCCTTGGCGCCGGCAGGCCTGCCCTGGTCCGGAGGGAGGTGGGTTCTCACCGGGTACCACCGCTTTTTACTCACCCCCTCGCCCGGCCGCCCGCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCTATGGGTAAGTGAGGACCCCGCCCCGCCGCCGCCCGCCCCTCTGCCCGGCCAGCCGCCATTCCGGGAGGGCGGTGGGGGTCGGCCCCCACGCGCGGCAGCAGCCCCGTCGCGGGAGGTGAGGTGGGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCGTCCAGGAGGGAGGTGGGGGGGTCGGCCCCCGCCCGGCCAGCGCCCGTGCGGGAGGGGGTGGGGGGTGTCGGCCCCCGCCGGCCAGCGCCCCGTCCGGAGGGAGGTGGGGGGGGGTCGCCCCCCGCCGGCAGCCAAGCCCGTCCAGGAGGTGAGGGCGCCTCTGCCGGCCGCCCCTAACTGGGAAGTGAGGAGCGCACGTCTGCCGGCCAAACGCCGCGTCTGGAGGTGTGCCCAACAGCTGCATCTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGCTTGAGAAATCTCGATGGTTTGCCGTGTCTGTGGTAGTAAAGAAGTAGACTGGGAGACTTTTCATTTTGTTCTGCACTAGAAAAATTCCTCTGCTGGGGATCTGTTTGATCTGTGACGCTTACCCGCCACCTTGTGCTGCTCTGAAACATGTGGCTGGTGTGCACTCAGGGTTAAATGGATTAAGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAGGCCATGCTCGTTAAGAGCTCTCACAATCCCTAATCTCAAGTAACTCAGGGACACAAACACTCGCGGAAGGCGGCAGGTCCCTCTGGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCACTAATGTCCCATGACCCTGCCAAATCCTCTGTGAGAAACACCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAATTAAACAATGGGAAATTAACTGCTAGCTGTTTGATAGGGCATAATTGGTGAGGAGCTAAAACCGTTAATTGTTTTCTAAACTCTCATTGATGTTTGGAGCAATACACTTGGAATCATAATTTATAAATGTATTTCTGAAGCACTTTTAGGCTCTCAGCAAACATATTTAACTTGCCAATATTGGTTGCCATGGAGAAAGCTTTCCTGAATTAAAAATGTATTTAAATTAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10764:HG2_PB_assemblyticsfalcon_8913:HG3_PB_pbsv_15121:HG2_Ill_breakscan11_4628:HG2_PB_pbsv_15470:HG2_PB_SVrefine2PB10Xhap12_11171:HG2_PB_SVrefine2PBcRplusDovetail_3599:HG2_PB_HySA_28148:HG2_PB_SVrefine2Falcon1plusDovetail_3845;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_15470;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0899131;ClusterMaxSizeDiff=0.0853797;ClusterMaxEditDist=0.268464;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=2655;DistBack=-4;DistForward=3;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=15:63770027-63770043;PctSeqSimilarity=0.9166;PctSizeSimilarity=0.9676;PctRecOverlap=0.9676;SizeDiff=86;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=95;MatchId=1852.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:38:./.:6:0:1:2:./.:0:2:16:0:0/1:34:7:0/1:92:51:.:2565:.
chr15	66394597	HG2_PB_PB10Xdip_10768	A	CAGCTTTTCAACTTGTTAATGATATTGGAGCATACGGCCTGAGTCAGCAACCCCCCGCACACCACCCAAGAAAATCTTTTTCTGGGTCTTTTTTCCCCATTTGACAGATGCCAGTCTTTCTCCAGAAAGACACATTCCAACTGATTGATTTTTTTCTTTGGGGAATTGATCCTTACCACCTACGAGGAAAGCAAAACATGAGGCTTGTCAAGCATTTTTTTAATGCTCTGATTTAAAAACTCATCCCCTGCTTCTGCCTTGCAACTTGCCTTGCCCAAAGGAGCTGCCTCTTCTCAAGGAGACATATGACAGAGTCCCGAAGGAGATGGCACTGGGAGGATGGACAGAAGGACGGATGGTGCCCACCGCCTGCCCTCCATCAGGGAGGCTCCAGGCAGAGGGAAGTAGTTAGGCACCTGGGATTCAGGTTGGACAGACCTGGGTTTGAGTCCCAGTTCTACTGAGCCAGCTATGTGACCTTGAGTCAATTAAAGTTACCTAACATCACAAAGCCTTGTGTTCTCCATCTATAAAGTTGGACTAATCACATTACCCAAATAGATGATAGTGAGGGAGAAATAAGATAACAGCTGTGAAGTGTCTGGCAGAGTGGGCTCCCAGCAAGGGCCCCAGAAATCCCAACTCTTCCTGTCATCATTGGCTTTGGAGAAGGCAGCACACTTGTGAGACTCAAGCATGCTGAACTCAGGGACTTCAGCAGACTCAAAACCAAGCATCTAGGGACAGAAGAGGCCAAGTAATAACACAGTCTCTGCTTCCACCACCTCATCCAGTGCTTGCAGACCCTCTCCCTCATCTCATGTCAAACCTCTCCCGAGATGCTTCTGCTAACAGCAAACACAGGCATTCTGTTCCTGCCTAACTCCATTGCATTCGTGTCCTCAAGTGAAAATGGCTCTCTCCAACTCCTGGGCCTTTGTACATGCTGTTCTCCCCATCCCCCATCCCACCCCTCTTCCCGCCTCCTCACCTGGCTAACTCTCTCTCAGGTGTCACTTTCAATGTTCCCTACTTTAGGAAGCTGTCCCTGGCTACCCTCCATAGGTTAGACGTTCCTGACTCGTGCTCCCCTAACATCTCCCCTATCCCATCATAGGGTCACATGTCACTGTTTTTGTTTGATTGTCTTCAACACTGGCTCAGGAGCCTCTGAAAAGGGGATGCTGTTTCTCTTACCATCATCTCCTCAGCACCCAGCTCGGTAGCGGCACAGAGCAGAAGCTTAATAATCATTTGCTGAATGTGTCAATGGGCGAATCAATGAAGCCCCTTTCAATTATAAGCAGCTCTGATTATTACAAGCTCTTCGCTTCACTGAGCTGAAATCTGCCTCCTTGAACTTCCACGTATTGGCAGCAAGTCTGCCCTTTCCTGCTCCCCAGACACATTTTATTTTGATTCCATGTGAAAAGCCTTCAGGGGATTTTTCTCTATTAGGATCTGATAGAAGTTAGAGATAGAGTGACAGGAACCCATGGCTTCTAAGCAGGATGTGGCAGGGACAGTGCCCACCTGTGAAGAAGTGTTCTCCCTTCAAAGTTAGCCTTTTGTCCTGGGGACTGCAGCAAGGCTGCTGCCACCATCCTGCTCCACGAAGCCCACCCTGTTTAGGAAAGCTGTCACTGCCGCATCCCCAGCACTGAGCAGCCTGTGGTCCCACTGATTTTAAATCTTATTCCAGTGAGAAGCTAAATCAGGAGCTACTTAGCACCACTGATTTATCACTTTAATAAACCTAACACAAAGCGAATGTGAGAGGCCACTGTCAGTCACCCCTCCCATCCTGCCCCCACCTTCCCTCCCAGCGCCTTTGCCCAGCCTGCAGGCCCCCTAACTTCCCTGCAATCTCAGGGAGTTTGTGCTTTTATGAATTGGTCCTTATCAAAACCACATCCTTTTCATGATGTCGGCTGTATTTGTTTCTCACTGAGTTGTGTTTACAAATTCCCTGCCTCCCCAGGAACTCGCACTTCTTCTTTGAAAAGACTCTTTAACACCCCTGGCCTGAGAGTCTACAGTCCTTCGCCTGTCCATGCCCCAGCTCTGTGGCTAACTCCTCATGTGGACGGGTCACACTGTTGGCCAGAACAGTGCAGGAGGGGGCAGGAGGAGACAAACTCCCAGAGTCCTTTTGCAGCCTCACATTCTTTGAGCTGGGAATGTTCAGTTCTCCCCTAACCAGAGCTTCGAGAAGTTGATTTCCATTCCCCCCAATCCAAACTACGCCCAGGGTCAAGCCCAAAGAGTTTCCTTACATGTCCAATAACTCTACTTGAACATTTAATGCTTTCCCCTTATTTTTAAATAACTTTATTTTTAAAATCACCTATTACACTGCTTCTAAGCCAGGATTCAAACCCAGGACTGTGCAGCCCCAAAGCCCGCACTCCCCCCAACTCTCACACGCAGCCTCTCCAGCAAACCCAAGCCTGTGGGGCAGGTGGATACAGAAGCGATGCTGGCCCACAGGCTGGGTGAGCAGGGAAGGCTTCCTAGCAGAGGAGGAAACCCCCAAGTGCAGTGGCATGAAGCACTTCATTGCGCAGATTGAGGTTGTGGAAACAGAACCCTGATCAGCTCTCTCCTCTGAACTCCAGTGGTCAAATTAGGGTCACCAAGGCAAAGGACATGTCATCCTCTTAGCCCGTGAGACTTAGGGTAAAGGGAGCAGACATTCCATCCTGTCCCTCCCTGGCTCACCCTGCAGGATGTCCCTGCCCATCACCCCCTTCCCACTCTCTATCCCTCATCCGGCCCTGCAGCTATACAGAGAAACAGCTTTGCCTACCCTGGGGGCCCCTGACTTCCCTTGCAGTTCCAGGGAGTTCGTGCTTTCATGAATTAGTTGAGGTGAGGATGGGCAGGTGCTCTGTTCTCTCCTGAGCGTTTCACCCAGGGGTCTGACTCTGTGTCTTTGGGAAGAAGCACCACCTCAATATATCTGAACTTGAGAGAATGACAAATGTGTAAGGTCATTTACTGCAGGACTGTTTACAATAGCAAAAGCCTAGAAATAACCTAGCTTTCCATACTCAAGGGAAAGGGTAAATCATGGTACAGCCACACAATGGAATAGTATGCAGCCACAAAAAGGAATCAGAAAGCTCTTCGGGTACTGAAAAGTGTACAATACTAGAGCTAAAGTGAAAAAAAGTACAGAGCAGAATTTAGAATATGTTACCATCTGTGTAAGAATGTTGAAGTATAGGGGAAGAATATATGTGTATATTTCCTTATCTATGCATAAAGTATCTCCAGAAAGATGCTCCAAAACTGGTCTCATGGATTTCCTCCAGGAAGGGCGGTCTGGAAGAAAGTTTATACTGCACTGCCTTTTATAACTGTTAAAGTTTGAGCCAGGAGAATGTGTTACCTGTGCAGAAAATAAATACCATTAAAACTACAAAAAATAAGGCACATTTTCCTGAAGGCCTCTGCTAACACAGAAAAGCATCCTCTGGGAGAAGAAACATGCTAGCATCCATAAACTTATTAGTCTCAAGTGAGCATAACTGTTACTAAGGCAGAGCCCTGACGGAAGGGGAGTCGGGATTGATCAGGAAGGTTTGTTCCGATCAAGGGGCCAAACCTTGGCCACTTCCAGAAGGTCAGTTCTGCTGCTGAGTTGGAGCCTGAGGTGTCACCTCCCCAGCAATGACTGGCCTCTGTCACACCTTGCTTAGCCCAGCTCAGGACAACAGCAGGTCCCTTGAGGCTGGCAGAGCAGGGGCGGTGGCAGCTGCAGCAAGGTCCCAGCAGCTGCTGGTCTCAGCACAACACGGAGAGCCCCCATAAAGCATAATTGCACAGAGCCCCAAGATGGTGTTTACTCCTGTAGCACACTCAGAGCAATATCGATTTCTTCAAATAAGATCCCTGTTTTCCCTTACTCCAACTTTCATCAACCTAATCTTGCAAGACGCCTTCTCCCTTCCTTTTCCCATTTTTTCCCTTCTCTTCCACTACTCTTGTTTCCTCTTTCACTTTCCCTTTCTCCCCTTTCTTCTTAATTCACAGCCCTGCTCTAAGCACCTCCCCTGGGCCAGGGCCAGGGCCAGGCACAGAAGCCACAAAGCTGGCCCCCTCCTCCCTCCCTTCTTCCTTTTCTCCTCTCCTCTCTTCCTCCCTCCCTTCCTTTCTTCCTATCAGTGATGGTTCTTCATCCAAGTCTACTCACTCTGGCCCTTTGGGGGATTGGGGCAAAGGGAGGGAGAAAGAGATGGGGGCAGAGGCTGCAGGATGTGCCAGCTGGCCCTGTCATCTCAAGTAGAGCCCCCCAGGGGAGATGAGAGTCAGAAGGATGCAGGGAAGGGAGCTGATGGGCCCCCGACTGGCCCAGCATCAGCTCTTGAGAAGCCACTGCAGCCCAGCAGAGAGCAAGGTGCCAACACCACGAGCACCTTTGGGTCCCCGGACCCCTTCATCTCTCCACCCACAGTGGAGAAAATTCCCTTCTGGAATGGCAGGCTATCCTCCCTACTGCTGCCCATCCATGTTCCCACCTTTCTTCCAGGTGCAGCCCACGCCCCTGCTCTCAACACATCCTGCCCAGTACCACAGCTGGTCATGCAGCTGCCACCCTCCTTTGTATCATAGTTCTGGTGACATCTGGCTCCTAACTAGTCTCAAATTCCTTAAAGGGGGAAACAAGGCCTTCTTTATTTGTGCCTCACTCTCTTCCCCCAACCTTGACCTATCACCTAGCACAGTTACATGGGGAAGACACTTGGCAGGTATTTGCAGAAAGGAAGAAGGGATGGAAGGAAGGAAGGAAGAAAAGGAGGGAGGGACAGAGAGGGAGAGGAAGGAAGGGAGGGAGGGAGGAAATAAAGACAAAACAGATTTCTACCTCTGAATTTTCAGAGCATATAATAGTTGCTATTCATCTGGTGCTTTTTAATTTCTAAAGCACACTTATGTTTATCATTTAATTTGCTTTCCCAACTCCTCTAAGAAGTAGGCAAGACAGCTGTGTTATTGTCTCCACTTTAGAGATGAGAACAGTGAGGTTCAAAGACATAAAAGACTTGACCAAGGTCATCCATGCCAGATCTGGTCCAGAGCCCAGAGCTCCTGGCTCCATGCCCCTGGCACTTGGCATAGCCTCTCTCATTACCTGTAGCATACTCTGGGCCTGACTCCTAGAGCAGCTGGCATGATTAATTGCCTCCTGGCATGTGGGGGACTCATCTACTGGCCTGGGCTATCAGCCACTGAAGGGCAGAGACCCCTCTCTGCTGTTCCTCCCAGTCCACAGGCACAGCCCAGAACCTGGCATTGCATAGTGGCTGGTGGACCCTTACTGGTCACTAAGAACCTTAACCCCCGCCAGGCCCTGCAATAGGGAACAATGGTGGGATGGGGGCCGGGGAGCCTGGACTTCATACCCTGCCCGAGATGAGCAAGCCCACAGTGCTGCTGGCTTCTCTGGTGCCTGAGAACACACATGTCTAGAAACTAGAAAGCCTGAGAGGCGGGACACTTATTTTTTTCCTGGGGGCAGAACAGTAGAGGAAAGGTGACAAGGAATTCAGCCCTTAAACACATAACTAAGTTGCTTCTTCCACCCCTGCCCCAGAGCACCTACAGAGGGCATGAATGCCACACACTCAACAAAACATTTTACCAAAGCAACAAAAACAATATCAGGCCCACAGTGGCAGCGTGTGGGTTGCCATGGAGTCTGACAAATCCTCGGACGCCAGCAGTCAGGGCTGCAGCCCGCGTGCTTCCACGGCTCTCTACACACCACGTGCAAACACACCCCAAGGCCAACGCACCACATTCTTCCAGGGCCAGAACTAGGGCCTACCAGATGGCAAAATCATCCAACCCGGAGTCGGGAGATCAGGCGGTGTGACCCAGGTGAACTTCACTTCTCAGAGCTCCAATTTTCTCATCTGGAAAATGAGAGTGATGAAGCTTTCCTGTGCCGCAGATAGCATGACATGTATGTGTGCAAGTGCTTTGCAGAGAATACAGAGTGTGGTAGGAGAGTCGAGTGGCTAGACTGTGGACTCTAGAGCTGGGGTTCCTGTGTTCAAATTCCAACTCCAGCACTTAGAGCTAGGCAACCAGCTAGTTACTAGGGCAACTCACCCACTGCTGGATAAGACGTTTCCCCACGTGTGTGAGAACAAGCAGCTGACAGGCACCATGGGAAAAGGCGACTCTGGCCTTGGCAAAGAGAGGAGAAAGGGTGGAAGATAACCCGAGGGCATGGCTCAGGCACCAGGGCAACCTTCTACCTGCCCACACTTCACATTTCACAAAGCCCCCTCTTTCCCATGATCTCACTTGCTTTTCTGCTCCCATCCCCACTTGCAGTCCAAGAGTCGGGATGATTTGTCAGACATGAACAGATGAGAATCCTAAGCAGCTCAGAGGATGAAGGTGAGTTGCCCAAGGTCACATAAAGGCAGTGTCACAGCCAGAAGCCAGTACAGCAAAGCCCGCTTTAGCCAGGCACTGTGCAAGGCATGGGTACCAGAATGTGCCACGGTCTTAGCTCTGGGAAAGTCACATCTAGAGAGGGAGTCAGGAGTCAGTGAAGCACCACCCAAAGCACGAGTCCTATTCCCACAAGGCAAGGGTGTGAGCCCCAAGGGAGTGAACACAAAGTGCAACAGCCACCAGGACACAGCCCGATGGCCTGGCAGTCCCAGGGCCAAGTGTTGGTATCTGCAGCCACAATGGTGCCTGCACATCCCTGAGCCCCTGCTCCAGGCTCCTGCCTGCTTTGGCTCCAGTCCAGCTGGTGATGCTGCAGCCACAGGTTCTTACTCTAGTTGGAGCCCCCAGGGGATCTGGCTGTGCCCACTTCTTCCATTCCATCCCTGCCACCTCCTCCTCCAGCCCTCTGGCCACCAGCATCTTCTAGTTGCTTAGGAGCAAAAAACTCTTTTCCTTCTCAAGGTCTTCACCCATTCAATTTCCCCTGCCAGGAGTTCCCTCCCCATCCCCAGGCTTTACTTCTGAATCCTTCAGGTCTCAGCTCCATAATCCTTCCCTGATCCCCCCAGCTTCCCATCTAAAGGAGGTCTCCCTGGTGTATTAGCTCTCAGCACCCCATGTTCTTTTCCTCCATGCCATCCATTGAAAATGTCCTCAATTTATTTGAGGATGGCTGTTAACAGCCTCTCTCACTAGGCTGTCGGTATCATGGAGACAGACACCTCATCTCTTTTATTCACCCCCAGCATCCACCTCTCAGCCCAACAATGAGCTCAGCGCACAGTAAGCACTCAATACTTACTGCCCAGATAAAAAATAAGTGAAGATGTTATTTAGCCATTTGAGTGGGTTTGCTGAGGATGGATGACCCTCTCGTCTGAAAGGATGCAGTAATTACTGTCATAGGGACACCACCAAAATAAACACCTTTCTTTTCCAGTCTCTCTGCCTCCTTGGGATTAAATGCAAGTAATATCTCATACTTGTGTGTAACAAAGTAAAAATCTGACTCCTGTTAGATCCCACACTTTACCTTTGTTAGGTAGTAGGGAAGTGCTGTTATCCTTGGGATGATGCCCAGGGAAGGGAAGTGATTAGCCCAGCTTCACACAGACATTAACTGAAGTATGGAGAACAAAGTGGGGCTGTCACCTTCTGCCCTGATCAAGCCAGACCTGCAGCCCTTTTTACATTTAAGAGGGAGAGCCTGGGAATAATGACTTGCTGGGCTGTGAGCTCCCTGAGTGAAGGGTCATGTCTGTTTTATAAATTTCTGTCTTGTCAGCACCTAGCCAACAGCCTGGCACATAAGAAAGAGGTGCTTGAAAATCCATTGTGAAATCAACAAATGATGCCTGCCCTGGAAAAGAAAACATTGGTTGGGGTGGGGGCAGGGAGAAGGGAGACAGGTTTCTAAACATCTGAAAAGTTACTATGTGAAAGAGAGAAATCATTTCTGGGACCAAAATAAATACCTTTCTTTTACTAAGAACAGTCCAAACCCACATGGGCTCCCTTAGGAGACAGTGAGTTCCCTGTCAACCAAGGTAATCAAACTGAGCCTGGACAAGCATCTCTGTGGCAGTGACAGCAGCAGGGCCTCCACGTTGCATAACCTGTGAGGCCCGTTTACATCCAAGAGTGGAAATGGTAGCCCAGAGGCTGGGGTAGAAATTAGCATCCGAAGAGCTGTGCCCAGGTTCAGAGACCTGCAGGGCCCCACCTAACTCTGAGAATGTGTGATTCTCTGGTCTGGGTGCAGAGAAGGACCAGGATTCACCCCCATGTCTCCTGATTTGCAGCCCGGTCCCATGGACATGAAGCCTGGGGTTATGGATCAGAAAGTCTCAGGACTCAGCTTTGAGCCTCAGCTACTCCATTCGACTTCTGGCCTTTGTTCTCCCAGTGACTTTGCTTGGGGTCAGAAAACGGAACCTCCACCCATAAATCCACCCCAATGCTCACCGTCCCCTTGGGACATCTTTCCTTTCCTCCTCCATCTGGGCACAATCTCACTCACACATCCCCAAGTCTAGCCTGAGGTGCTGAGGCAGCTGTCTCCCTGAGAGCCATCTCCCAGGTGCCCCTACCTTCCCCCCGCACATGGGAGTCCTTGTGCAGAGAGAACAAGGTGCAGCTGGAAGGGGCTCAGCTGGGCCCAGAGACAAAGGAGAAGAGGGAGGTGGCTGCCTGGGAACTGGATGCCAATTCCCAGCTGCCTCTGAAGGTCATTGATGTAGCTGCCTCCCAGCCTTCCCTCTCAGTGGGTCCAATAAGAGGACTCTCAAATGGTCTCCACCCAAAGAAAAGAGAAATTCATGAAGCAGCAGCAAGCGGGGGTGGCAGAGGGGAAGTCAAGCAGGAAAGTGATTCTGATCTCCAGCCAGCTCGGCTTTAGTGGCCAGGGGCCATCGTCACACGACACCAGCACAAAAGGCTCAATGGGCTTGGATCCACTAGCTTGTGCCCAGGGCCGTCTCTAGGGAGGGGAACCAAAAGAAAGTGACACCCAAAGACTGAATCAGCCTTTCTGCTGCCAGAGGTTAATGAGCAAGGCTCCCTGCCTTTCTGGGGAGGTGCTATTTTGATTTCCCCAAAGCCCCTTCCTGGTAGACACTGAAATGGTCAACAAACCCTACTAACTCTTGTTAGCCCCACAAGGACATAGAGACATTCAGACTCAAACCCTGCCTTGGGGACCTTCAGGACAACTTCACCAAGGAGGCACAGGGGGTGAACAGGTGACATGACATAATGCCACACAGAGCCCAGCAGGTGACTAGCAGGGGCACCCTGAGTTTCCTCTGGGCTTCTGGAGAGACCTTGGTTTCTTCTGGTGGGGGAGACAGTGGCCTTTAGGCTGTGCCTCATCCCCACAAGCCAGGGAGCAAGGGGCAAGGCTGGAGCCACAGGCTGCACTCCTCCCTCCTGGGACACCCTGGTGCTGGGCTTGGGCAATCCACCCAAGGCCAACCTGCTCAGATCGGCTGTGATGTCTGGATTGTGAAGACTCTAGTTGGGATGTCCTGGTAACAGAAGGTGTGGGGTGATTGGAACGGGGGACACAGTTGGCTTCAGATCGTTTTTTGTTTTGTTTTGTTTTTGTTTCTTTGAGCTGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTACAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCTGCCACCACACACACCGGCTAATTTTTGTAATTTTTAATAGAGACAGTGTTTTGCCATGTTGGCCAGGCTGGTCTTGATCTCCTGACCTCAGGTGATCCGCCTGCCTTGGCCTCCTGAAGTGCTGGGATTATAGGCTTGAGCCACCACGCCCAGCTCAGATCAAGTTTTAAAGGTGGAAGGGCACCAGTACCCTTCATCTATCTGTGTCAATCTCTCTCCATCCGAAGGAGCATGGAGAGAAATGTCACCTCCCCGGGGAACAAAACTACATTTTAGCAGGAGCCTTCTGGAGACCAGGAAATCACCCAGTGGCATCTCCCTAATGGGAAAATCTCTGGCTTGTCAGTGGGAGAGATATTGAGAGGTCCTGAGACATAGCAATTTGTACAATGCCTTTTTCCTCAAAAGCATACCCTCTGCTAACACTTCATTCAGATATCTGCCTCCTTCCAGGTCTGGCACAGTTTCTAGGAAAGAGGCTTGGCTTTGGAGTCAAGCAGACCTAAGCTTGAATCCTATCTCTTCGGGTTCCCAGCTCAGTGACCTCTGGCTAGTCACCTGACTTCTCTGTGCTTCTGCTTCCTCCTATCTGAACTAGGAATAACAGGCCCCACTGCGAAGCACTTCTGTAAGAATGGAGGAAGAAAAGGCTGGGCACAGTGGCTGATGCCTGCAATCCCAGCACTTTGGGAGCCCGAGGCGGGCAGGTCACCTGAGGTCAGAGGTTGGAGACCAGCCTGGCCAATATGGTGAAACCCCATCTCTACTAAAAATACAAAAACTAGCTGGGCATGATGACACGTGCCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGACTGCAGTGAGCCGAGATCGTGCCATTACACTCCAGCCTGGGTGACAGAACGAGATTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGGGACTGGAGGAAGAGCACCCCTTGTGGGGCCTGGCGCTCCATGGACCCCACTACGTGACTCTCCTCTCTGTGCCCCTGGATATGCAGCACTTGCTCTGGGAGGCCACCAATAACCACAGGAAAAGTTTTATCACTGGGATGAAGACACACTGGAATATACCCATCATTCCAACCAGCTGGGGAGGCAGGGAAGGGAGAGGACCATTTGGGGAAAAGGATATTAACGGTTCCAGCCAACAGAAGTCCCTCATCACCTTTAATTCTCCCAGAGGAAGCCTGTCCAGGTTGAGTTATCTTCTGTGGGAAGGAAAAGTGGCTCTGGCCCTTTTAACCTAACACGGATCATAGAGCAGAGAAAATATAACAGCCCCAAACCACTAAGCACTCTTCAACTAGATTTTCCCAGCCCTGCCAGAGGCAAATGGAGGCTGCAGCTAAAGGAATGACATGTATATTTTCTGGAGGAAGTGGAAGGCCCACCTGTCAGGCAAAGGCAGTGGGGATCCTCAGGGAGCTGGCAGGGCATCTGCCCATGTGACCTCAGAGGCAGGCCCTGCCCAGGGCAGACAGGCTCAAGAGGTGGCTGCCGAGTCAGGGTTTCTGAGGATGGATAGCCATGCAGTGGGCCAGCACTCAGAGCACGGGGACATTTCATCTCTCCATCATTGACCCACTTGACCGCTGTGCTGGTAAGTTGTTGCAACATATGCATGAAAATTGCAAGTCTCGTAATTCACCCAGATGGTGGAAGTTCCCAAATTGTTCCTTCTCAAGAGACAGCTGTTCCACCGCTGGGCCATATGGCTCCCTTTGCTCCGTACTCTGCTCTGGGAAATAAACCACTTGCCATGAGCAACTGCGCAGATCTTAGAACCATCTCTTGTTCTTAGCAGGTAATGAAGACCTCCAACAGAGGCGTCCACATTGTACCATGCATGGTTTGTACACATGTCAGAAGCTGTGTTTTAAAACTCCATTAAGGTAAATACAGGAAGCTGGTGGGCAAGGCATGCCGGCTTTGCTTCCTACTCAGGGGTAATGTCTACCATCACAGATTCAGAAAAGGAAGATGCCCAGAAAGTCAGCTAGCCGTTTCTCTGCTTGCAGCAGGGCTAGCCCTCACCACACCCAGACAAGCCCCAGAATGCTGGGCTGGAAGTGACCTTGAGAAAAATGCTATTTACCCTCTGACAGAGGCTTGCTTCATTCCAGACACATGGAGACAGACAAATCTCACACATATATTTCACCATTTGAGCTGTAAGGTTATTAATCGCTAAGACCTGGGCTTTAGAACCATACTGACCTCCTCAGCGGAAATTCAAGAACACCGGCTGCCAGAGACCGTTCTTGTCACAGGTAGGCTGGCCCTTCGGACCCCTCTCTGCAGTTCTGAATAATTGTTTCTCTCTGGGACACCTGTAGGCTGACCCCCAGGACCTTGATGATGCAGATCTAAAATTTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7666:HG2_PB_PB10Xdip_10769:HG2_PB_PB10Xdip_10768:HG2_PB_SVrefine2Falcon1plusDovetail_3851:HG3_PB_SVrefine2Falcon1Dovetail_9383:HG4_PB_SVrefine2Falcon1Dovetail_9434:HG2_Ill_SVrefine2DISCOVARplusDovetail_4292:HG3_Ill_SVrefine2DISCOVARDovetail_11095:HG4_PB_SVrefine2PBcRDovetail_7678:HG3_PB_SVrefine2PBcRDovetail_7271:HG2_PB_SVrefine2PBcRplusDovetail_3607:HG2_PB_SVrefine2PB10Xhap12_11180:HG4_Ill_SVrefine2DISCOVARDovetail_10916;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_10768;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00371088;ClusterMaxSizeDiff=0.00371088;ClusterMaxEditDist=0.00767897;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=12136;DistBack=62350;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=15:66394598-66394604;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.999;PctRecOverlap=0.999;SizeDiff=-12;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1853.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:117:1/1:1:32:0:18:./.:0:13:1:6:1/1:0:30:1/1:0:488:.:12173:.
chr15	66668137	HG2_PB_HySA_28175	T	TAAAAGCACATATACAGCCGGGCGCGGTGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCGTCTCTACTAAAAATACAAAAAATTAGCCGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_28175:HG2_PB_pbsv_15481:HG3_PB_assemblyticsfalcon_8911:HG2_Ill_breakscan11_4630:HG3_PB_pbsv_15132:HG3_PB_SVrefine2Falcon1Dovetail_9386;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_28175;NumExactMatchSVs=1;ClusterMaxShiftDist=0.135802;ClusterMaxSizeDiff=0.135802;ClusterMaxEditDist=0.234074;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=8573;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=15:66668138-66668152;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9846;PctRecOverlap=0.9815;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1854.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:33:./.:11:8:6:15:./.:26:0:1:8:0/1:27:7:0/1:10:32:.:.:.
chr15	66879302	HG2_PB_SVrefine2PB10Xhap12_11184	C	CCTTCTCCTCCTCCTCCTCCCCCTCCTCCTCCTCCCCCTCCTTCCCCTCCTTCTCCCCCTCCCCCTCCTCCGCCTCCCCTTCCCCCTTCTCCCCTCCCCTTCCCCTTCTCCCCCTCCCCACTTCCCTTCCCCCTTCTCCCCCTCCCCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7669:HG2_PB_SVrefine2PB10Xhap12_11185:HG4_PB_SVrefine2Falcon1Dovetail_9437:HG3_PB_SVrefine2PBcRDovetail_7274:HG2_PB_PB10Xdip_10773:HG2_PB_PB10Xdip_10774:HG3_PB_SVrefine2Falcon1Dovetail_9387:HG2_PB_pbsv_15482:HG2_PB_HySA_28178:HG3_PB_pbsv_15133:HG4_PB_SVrefine2PBcRDovetail_7682:HG2_PB_SVrefine2Falcon1plusDovetail_3854:HG2_PB_SVrefine2PBcRplusDovetail_3610:HG2_PB_SVrefine2PB10Xhap12_11184:HG2_10X_SVrefine210Xhap12_10710;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11184:HG2_PB_SVrefine2PBcRplusDovetail_3610;NumExactMatchSVs=2;ClusterMaxShiftDist=0.178082;ClusterMaxSizeDiff=0.178082;ClusterMaxEditDist=0.192691;PBcalls=14;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=147;DistBack=9807;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=343;REFWIDENED=15:66879303-66879645;PctSeqSimilarity=0.9847;PctSizeSimilarity=0.9932;PctRecOverlap=0.8926;SizeDiff=-1;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=95;MatchId=1855.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:39:1/1:2:16:1:8:./.:1:13:2:11:./.:0:3:./.:.:.:.:.:.
chr15	67156987	HG4_Ill_manta_3616	A	ATCTGGTGCTGAGGCCCATGAACTTCCCACAGCCAGGACTGGCCTGCAGGGTCAGGACTTGTAATTAATCCAAATTCTCTGAGAAGCAGATGCCAAGTCAGGATTAGATGTGCAAGAGATTTATTAGGGAACATGGCTGCGAGGGAAGATGGGGAGGGAGCTAGG	20	PASS	ClusterIDs=HG2_PB_pbsv_15487:HG2_Ill_breakscan11_4631:HG2_PB_SVrefine2Falcon1plusDovetail_3857:HG3_PB_SVrefine2Falcon1Dovetail_9389:HG4_Ill_svaba_19243:HG4_Ill_manta_3616:HG4_Ill_SVrefine2DISCOVARDovetail_10922:HG4_Ill_MetaSV_1709:HG4_Ill_GATKHCSBGrefine_10614:HG4_Ill_Cortex_1195:HG2_PB_SVrefine2Falcon2Bionano_7672:HG2_Ill_svaba_19267:HG2_Ill_manta_4258:HG2_Ill_SpiralSDKrefine_5618:HG2_Ill_MetaSV_1651:HG2_Ill_GATKHCSBGrefine_10263:HG2_Ill_Cortex_2898:HG2_10X_SVrefine210Xhap12_10712:HG2_PB_assemblyticsfalcon_8950:HG3_PB_assemblyticsfalcon_8919:HG2_PB_HySA_28188:HG4_PB_HySA_22519:HG4_PB_pbsv_15393;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10712:HG2_Ill_Cortex_2898:HG2_Ill_GATKHCSBGrefine_10263:HG2_Ill_MetaSV_1651:HG2_Ill_SpiralSDKrefine_5618:HG2_Ill_manta_4258:HG2_Ill_svaba_19267:HG2_PB_SVrefine2Falcon2Bionano_7672:HG4_Ill_Cortex_1195:HG4_Ill_GATKHCSBGrefine_10614:HG4_Ill_MetaSV_1709:HG4_Ill_SVrefine2DISCOVARDovetail_10922:HG4_Ill_manta_3616:HG4_Ill_svaba_19243;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0771513;ClusterMaxSizeDiff=0.0771513;ClusterMaxEditDist=0.25;PBcalls=9;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=164;DistBack=-1;DistForward=2916;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:67156988-67156987;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1856.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:19:./.:13:11:16:6:1|0:1:34:25:0:0/1:30:15:./.:.:.:.:.:.
chr15	67294847	HG4_Ill_GATKHCSBGrefine_10615	T	TGGTCACTCTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10780:HG3_PB_pbsv_15138:HG2_PB_assemblyticsfalcon_8951:HG4_PB_pbsv_15394:HG2_PB_pbsv_15488:HG3_PB_assemblyticsfalcon_8920:HG4_PB_HySA_22520:HG3_PB_SVrefine2PBcRDovetail_7276:HG2_PB_SVrefine2PBcRplusDovetail_3613:HG2_PB_SVrefine2Falcon2Bionano_7673:HG2_PB_SVrefine2PB10Xhap12_11188:HG2_PB_SVrefine2Falcon1plusDovetail_3858:HG3_PB_SVrefine2Falcon1Dovetail_9390:HG4_PB_SVrefine2Falcon1Dovetail_9439:HG4_PB_SVrefine2PBcRDovetail_7684:HG4_Ill_MetaSV_1710:HG4_Ill_GATKHCSBGrefine_10615:HG2_10X_SVrefine210Xhap12_10713:HG2_Ill_MetaSV_1652:HG3_PB_HySA_23344:HG2_PB_HySA_28189:HG2_PB_PB10Xdip_10779;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10713:HG4_Ill_GATKHCSBGrefine_10615:HG4_Ill_MetaSV_1710:HG4_PB_SVrefine2PBcRDovetail_7684;NumExactMatchSVs=4;ClusterMaxShiftDist=0.134351;ClusterMaxSizeDiff=0.134351;ClusterMaxEditDist=0.252941;PBcalls=18;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=312;DistBack=35733;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=15:67294848-67294860;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1857.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:71:1/1:0:27:0:10:1/1:0:9:0:7:1/1:0:17:1/1:2:65:.:.:.
chr15	68688009	HG3_PB_SVrefine2PBcRDovetail_7283	G	GACCAAATCTACGTTTGACTGGTGTACCTGAAAGTAATGGGGATAATGGAACCAAGTTGGAAAACAGTTTTCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAAATTCAGGAAATACAGAGAACACCACAAAGATACTCCTTGAGAAGGGCAACCCCAAGACACATAGTTGTCAGATTCACTAAGGTTGAAATGAAGGAAAAAATGTTAAGGCAGCCAGAGAGAAAGGTCGAGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCTTAAAAGCCAGAAGAGTGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATGTCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAACAAAATCCTTTACAGACAAGCAAACGCTGAGAGATTTTGTCACCACCAGGCCTGCCTTACAAGAGCTCCTGAAGGAAGCACTAAATGTGGAAAGAAACAACTGGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACTATTGATGCTATGAAGAAACTGCATCAATTAACCAGCTAACATCATAACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAGTTTTAACTTTAAATGTAAATGGGCTAAATTCCCCAATTAAAAGACACAAACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTCTATTCAGGAGACCCATTTCCCATGCAAAAACGCACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGTAAACGGAAAGCAAAAAACAACAACAACAACAAAAAGCAGGGGTTGAAATCCTCCTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGGTCAATTCAACAAGAAGAGCTAACTATCCTAAACATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCATAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAGGTTAACAAGGATATACAGGACTTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTCTCAGCACCACATTGCACTTATTCTAAAATTGACCACATAATTGGAAGTAAAGCACTCCTCAGGAAATGCAAAAGAACAGAAATCACAACAAATTGTCTCTCAGACCACAGTGCAATCAGATTAGAACTCAGGATTAAGGAACTCACTCAAAACCACACAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTAAATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAATGAGAACAAAGACACAATGTACCAGAATCTCTGGGACACAATTAAAGCAGTGTGTAGAGGGAACTTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCTAAAATCGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACAAATTCAAAAGCTAGAAGAAGGCAAGAAGTAAATAAGATCAGAGCAGAACTGAAAGAGATAGAAACACAAAAAACCCTTCAAAATATCAATGAATCCAGGAGCTGTTTTTTTGAAAAGGTCAACAAAATTGATTAGACAGCTAGCAAGACTAATAAAGAAGAAAAAAGAGAAGAATCAAATAGACGTAATAAAAAGTGATAAAGGGGATATCACCACTGATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAGGACTAAACCAGGATGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGAGACAATAACAGCCTACCAACCAAAAAAAGTCCAGGACCAGACGGATTCACAGCCGAATTCTACTAGAGGTACAAAGAGGAGCTGGTACCATTCCTTCAGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCGTAACTCATTTTATGAGGCCAACATCATCCTGATACCAAAGCTTGGCAGAGACACAACAAAAAAAGAGAATTTTAGATGAATATCCCTGATGAACACCGATGCGAAAATCCTCAATAAAATCTGGCAAACTGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAGGTTGGCTTCATCCCTGGGATGCAAGACTGGTTCAACATATGCAAATTAATAAACATAATCCATCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAGCCCTTCATGCTAAAAACTCTCAATAAACTGGATATTGATGGAACGTATCTCAAAATAATAAGAGCTATTTATGACAAACCCACAGCCAATACCATACTGAATGGGCAAAAACTAGAAGCATTCCCTTTGAAAACCAGCACAACACAAGGATGCCCTCTCTCACCACTCCTGTTCAACATAGTGTTGGAAGTTCTGGCCAGGGATTTCAGGCAAGAGAAAGAAATAAAGGGTATTCAATTAGGAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGACTGTATATTTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAACAACTTCAGCAAAGTCTCTGGATAGAAAATCAGTGTGCAAAAATCACAAGCATTCCTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCTCATTCACAATTGCTACAAAGAGAATAAAATACCTAGGAATCTAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTAGAAACCACTGCTCAATGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGATAGGAAGAATCAATATTGTGAAAATGGCCATACTCCCCAAGATAATTTATAGATTCAATGCCTTCCCCATCAAGCTACCAATGGCTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAACCCGCATTGCCAAGACAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCATGCTACCTGACTTGAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGATATATAGACCTATGGAACAGAACAGAGGCCTCAGAAATAACACCACACATCTACAACCACCTGATCTTTGACAAAGCTGACAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGTTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATTCAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTAGATCTAAAACCATAAAAACCCTAGAGGAAAATCTAGGCAATACCATTCAGGACATAGGCATTGGCAAGGATTTCATGACTAAAACACCAAAAGCAATGGCAACAAAACCCAAAATAGACAAATGGGATCAATTAAACTAAAGAGCTTCTGCATGGCAAAAGAAACTACCACTAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTACCCATCTGGCAAAGGGCTAATATCCAGAATCTACAAAGAACTCAAACAAATTTACAAGAAAAAAAAACCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATCTATGCAGCCAACAGACACATGAAAAAATGCTCATCATCACTGGTCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACGCCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTAGAGAGGATGTGGAGAAATAGGAACGCTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCAATTCCTCAAGGATCTAGAACTAGAAATACCATTTGACCCAGTGATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTACTATAAAGACACATGCACACGTTTGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAAAGTCCATCAATGATTGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGTCATAAAAAAGGATGGGTTCTTGTCCTTTGCAGGCACATGGATGAAGCTGGAAACCATCATCCTCAGCAAACTATCACAAGGACAGAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10785:HG2_PB_pbsv_15494:HG3_PB_pbsv_15144:HG4_PB_pbsv_15398:HG2_PB_SVrefine2Falcon1plusDovetail_3864:HG4_PB_SVrefine2PBcRDovetail_7688:HG2_10X_SVrefine210Xhap12_10722:HG4_Ill_SVrefine2DISCOVARDovetail_10928:HG4_PB_SVrefine2Falcon1Dovetail_9442:HG2_PB_SVrefine2PB10Xhap12_11194:HG2_PB_SVrefine2PBcRplusDovetail_3618:HG3_PB_SVrefine2PBcRDovetail_7283:HG2_PB_SVrefine2Falcon2Bionano_7679:HG2_Ill_SVrefine2DISCOVARplusDovetail_4301:HG3_PB_HySA_23361:HG2_PB_HySA_28208:HG2_PB_PB10Xdip_10784;NumClusterSVs=17;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_7283;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0676403;ClusterMaxSizeDiff=0.0674207;ClusterMaxEditDist=0.177344;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=4450;DistBack=6653;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=15:68688010-68688011;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9998;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1858.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:95:1/1:4:22:0:23:./.:0:3:0:5:1/1:0:52:1/1:2:844:.:4355:.
chr15	68701815	HG3_Ill_Krunchall_20546	A	AGTAGGTACTGATAGGTAGTACTGATACTCTACCTATCAGTACTACCTGACTAG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_20605:HG2_PB_HySA_28210:HG4_Ill_SVrefine2DISCOVARDovetail_10930:HG4_Ill_250bpfermikitraw_20269:HG3_Ill_Krunchall_20546:HG3_Ill_GATKHCSBGrefine_10177:HG2_Ill_GATKHCSBGrefine_10269;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20605:HG4_Ill_SVrefine2DISCOVARDovetail_10930:HG4_Ill_250bpfermikitraw_20269:HG3_Ill_Krunchall_20546:HG3_Ill_GATKHCSBGrefine_10177:HG2_Ill_GATKHCSBGrefine_10269;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0377358;PBcalls=1;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=8560;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=173;REFWIDENED=15:68701816-68701988;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1859.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:24:1|0:1:18:23:2:./.:14:0:8:2:0/1:25:17:./.:.:.:.:.:.
chr15	69578336	HG4_Ill_SVrefine2DISCOVARDovetail_10934	T	TGAGCCCTCAACCTCTGGGATCTGACGCGGTCTTTAGGTAGAGAGTGTCAGAACTGAATCGGAGGACACCCA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4307:HG4_PB_assemblyticsfalcon_8814:HG2_PB_pbsv_15502:HG2_PB_HySA_28217:HG4_PB_pbsv_15408:HG4_Ill_250bpfermikitraw_20279:HG2_PB_SVrefine2PBcRplusDovetail_3622:HG3_Ill_Krunchall_20556:HG3_Ill_250bpfermikitraw_20008:HG2_Ill_250bpfermikitraw_20614:HG3_PB_HySA_23375:HG3_PB_pbsv_15152:HG4_Ill_SVrefine2DISCOVARDovetail_10934:HG3_PB_SVrefine2PBcRDovetail_7288:HG2_PB_SVrefine2Falcon2Bionano_7684;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4307:HG4_Ill_SVrefine2DISCOVARDovetail_10934:HG3_PB_SVrefine2PBcRDovetail_7288:HG2_PB_SVrefine2Falcon2Bionano_7684;NumExactMatchSVs=4;ClusterMaxShiftDist=0.248175;ClusterMaxSizeDiff=0.231884;ClusterMaxEditDist=0.347826;PBcalls=9;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=71;DistBack=45683;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=143;REFWIDENED=15:69578337-69578479;PctSeqSimilarity=0.9947;PctSizeSimilarity=1;PctRecOverlap=0.6901;SizeDiff=0;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=89;MatchId=1860.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:41:./.:27:12:3:20:./.:12:5:10:0:0/1:30:20:./.:.:.:.:.:.
chr15	70408622	HG2_PB_SVrefine2PBcRplusDovetail_3625	T	TAAAAAAAAAGAGCGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3870:HG2_PB_pbsv_15507:HG4_PB_pbsv_15413:HG2_PB_assemblyticsPBcR_8703:HG2_PB_assemblyticsfalcon_8994:HG4_PB_assemblyticsfalcon_8829:HG2_PB_HySA_28237:HG2_PB_PB10Xdip_10792:HG2_PB_PB10Xdip_10793:HG4_PB_SVrefine2PBcRDovetail_7693:HG2_PB_SVrefine2PBcRplusDovetail_3625:HG2_PB_SVrefine2PB10Xhap12_11204:HG2_PB_SVrefine2Falcon2Bionano_7687:HG2_10X_SVrefine210Xhap12_10732:HG4_Ill_MetaSV_1716:HG2_Ill_MetaSV_1658:HG2_Ill_GATKHCSBGrefine_10279:HG4_PB_SVrefine2Falcon1Dovetail_9449:HG3_PB_HySA_23396:HG3_PB_pbsv_15157;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10732:HG2_PB_SVrefine2Falcon2Bionano_7687:HG2_PB_SVrefine2PB10Xhap12_11204:HG2_PB_SVrefine2PBcRplusDovetail_3625:HG4_PB_SVrefine2PBcRDovetail_7693;NumExactMatchSVs=5;ClusterMaxShiftDist=0.143312;ClusterMaxSizeDiff=0.143312;ClusterMaxEditDist=0.2;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=314;DistBack=36818;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=15:70408623-70408637;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1861.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:71:./.:4:4:0:32:1/1:0:5:0:7:1/1:0:21:1/1:2:52:.:.:.
chr15	70577522	HG3_Ill_manta_3482	T	TGTGTGTGTGAGAGAGAGAGAGAGAGAGAGACAGAGGCTTGATAAGATCTCTGTGGGCTGTGGGGTTAACCATCTTTAAATTAAATTATTTAAATCAAATTCAACCCATGAAAACCCATATTTATACACACACACACACACGCACACCCATATTCAGCCACTGTTCACTCTACCAAAAAAAAACCCTAAAGCAAACAAAAAAACCCTTAACTCTAAAAAGAAAAACAAAAAAGAAAAAAAAAACCTTAACTCTAGAGTTTTTCCTAGGACTATATTGGAATCTTCATTTTCCAACACATTCATGACAAGATGTGGTTAGAAACAACCTCCATGTCCATCAAAAGGAGAGTGGCTAAATATTTTATGGCATATCTATACAACA	20	PASS	ClusterIDs=HG2_PB_pbsv_15509:HG3_PB_pbsv_15159:HG4_PB_HySA_22564:HG4_PB_pbsv_15416:HG4_PB_SVrefine2Falcon1Dovetail_9451:HG4_PB_SVrefine2PBcRDovetail_7695:HG4_Ill_SVrefine2DISCOVARDovetail_10940:HG3_Ill_MetaSV_1779:HG3_PB_SVrefine2PBcRDovetail_7292:HG4_Ill_MetaSV_1717:HG2_PB_SVrefine2Falcon1plusDovetail_3872:HG4_Ill_manta_3625:HG3_Ill_manta_3482:HG3_Ill_SVrefine2DISCOVARDovetail_11116:HG3_Ill_GATKHCSBGrefine_10188:HG2_PB_SVrefine2PBcRplusDovetail_3627:HG2_PB_SVrefine2PB10Xhap12_11206:HG2_PB_SVrefine2Falcon2Bionano_7689:HG2_Ill_manta_4268:HG2_Ill_SVrefine2DISCOVARplusDovetail_4310:HG2_Ill_MetaSV_1659:HG2_10X_SVrefine210Xhap12_10735:HG2_PB_PB10Xdip_10795:HG2_PB_PB10Xdip_10794:HG2_Ill_breakscan11_4632;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_MetaSV_1659:HG2_Ill_SVrefine2DISCOVARplusDovetail_4310:HG2_Ill_manta_4268:HG2_PB_SVrefine2Falcon2Bionano_7689:HG2_PB_SVrefine2PB10Xhap12_11206:HG2_PB_SVrefine2PBcRplusDovetail_3627:HG3_Ill_GATKHCSBGrefine_10188:HG3_Ill_SVrefine2DISCOVARDovetail_11116:HG3_Ill_manta_3482:HG4_Ill_manta_3625;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0439276;ClusterMaxSizeDiff=0.0413437;ClusterMaxEditDist=0.201018;PBcalls=13;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=381;DistBack=2005;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=15:70577523-70577524;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1862.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:30:0:17:1/1:0:23:1:26:1/1:0:24:./.:3:49:.:.:.
chr15	70823810	HG2_PB_SVrefine2PBcRplusDovetail_3629	G	AAGAAAGGAAGGAAAAAAGGAAGGGAGGAAAGAAAGAAGGAAGGAAGGAGGGAAGGAAGGAAGGGAAGAAGGATGGAAGGAAGGAAAGAAGGAAGGGAGGGAGGGAAGGAAGGGAGGGAGGGAAGGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10737:HG4_PB_SVrefine2PBcRDovetail_7698:HG2_PB_SVrefine2Falcon2Bionano_7691:HG3_PB_HySA_23402:HG4_Ill_SVrefine2DISCOVARDovetail_10942:HG2_PB_assemblyticsfalcon_8999:HG2_PB_assemblyticsPBcR_8708:HG2_PB_SVrefine2PBcRplusDovetail_3629:HG2_PB_SVrefine2PB10Xhap12_11209:HG2_PB_SVrefine2Falcon1plusDovetail_3875:HG2_Ill_SVrefine2DISCOVARplusDovetail_4312:HG2_10X_SVrefine210Xhap12_10738:HG4_PB_HySA_22567:HG4_PB_assemblyticsfalcon_8836:HG2_PB_HySA_28242:HG2_Ill_MetaSV_1660:HG2_PB_PB10Xdip_10797:HG2_PB_PB10Xdip_10796:HG4_Ill_GATKHC_24621:HG4_Ill_GATKHCSBGrefine_10630:HG3_Ill_GATKHCSBGrefine_10191:HG4_PB_SVrefine2Falcon1Dovetail_9453:HG4_PB_pbsv_15420:HG3_PB_pbsv_15163:HG3_PB_SVrefine2PBcRDovetail_7295:HG2_PB_pbsv_15513:HG3_Ill_SVrefine2DISCOVARDovetail_11118;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10738:HG2_Ill_SVrefine2DISCOVARplusDovetail_4312:HG2_PB_SVrefine2Falcon1plusDovetail_3875:HG2_PB_SVrefine2PB10Xhap12_11209:HG2_PB_SVrefine2PBcRplusDovetail_3629:HG2_PB_assemblyticsPBcR_8708:HG2_PB_assemblyticsfalcon_8999:HG4_Ill_SVrefine2DISCOVARDovetail_10942;NumExactMatchSVs=8;ClusterMaxShiftDist=0.135338;ClusterMaxSizeDiff=0.135338;ClusterMaxEditDist=0.350195;PBcalls=18;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=126;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=85;REFWIDENED=15:70823725-70823809;PctSeqSimilarity=0.9925;PctSizeSimilarity=1;PctRecOverlap=0.9449;SizeDiff=0;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=97;MatchId=1863.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:42:1/1:3:13:1:26:./.:3:25:3:20:1/1:1:21:./.:.:.:.:.:.
chr15	70929877	HG3_PB_SVrefine2Falcon1Dovetail_9392	G	GAAAATTAATGCCATGCCACTCACAGCCACCTTCGTGTACCATGTTCGGGCTCAGGACCAATAGGGAAGGCACAGGAAGGCAGATTTCTGGTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3876:HG2_PB_pbsv_15514:HG4_Ill_GATKHCSBGrefine_10632:HG3_PB_pbsv_15164:HG4_Ill_250bpfermikitraw_20300:HG4_PB_pbsv_15421:HG3_Ill_GATKHCSBGrefine_10192:HG2_Ill_GATKHC_24727:HG2_Ill_GATKHCSBGrefine_10286:HG4_PB_HySA_22571:HG3_PB_HySA_23406:HG2_PB_PB10Xdip_10799:HG2_PB_PB10Xdip_10798:HG2_PB_HySA_28246:HG2_Ill_SVrefine2DISCOVARplusDovetail_4314:HG4_PB_SVrefine2PBcRDovetail_7699:HG4_PB_SVrefine2Falcon1Dovetail_9454:HG3_PB_SVrefine2PBcRDovetail_7296:HG3_PB_SVrefine2Falcon1Dovetail_9392:HG3_Ill_SVrefine2DISCOVARDovetail_11120:HG2_PB_SVrefine2PBcRplusDovetail_3630:HG2_PB_SVrefine2PB10Xhap12_11210:HG2_PB_SVrefine2Falcon2Bionano_7692;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3876:HG4_PB_SVrefine2PBcRDovetail_7699:HG4_PB_SVrefine2Falcon1Dovetail_9454:HG3_PB_SVrefine2PBcRDovetail_7296:HG3_PB_SVrefine2Falcon1Dovetail_9392:HG3_Ill_SVrefine2DISCOVARDovetail_11120:HG2_PB_SVrefine2PBcRplusDovetail_3630:HG2_PB_SVrefine2PB10Xhap12_11210:HG2_PB_SVrefine2Falcon2Bionano_7692;NumExactMatchSVs=9;ClusterMaxShiftDist=0.184466;ClusterMaxSizeDiff=0.17561;ClusterMaxEditDist=0.29108;PBcalls=16;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=92;DistBack=-92;DistForward=11;DistMin=-92;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=100;REFWIDENED=15:70929878-70929977;PctSeqSimilarity=0.9856;PctSizeSimilarity=0.9783;PctRecOverlap=0.8602;SizeDiff=2;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=94;MatchId=1864.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:0:8:0:13:1/1:1:6:1:7:1/1:0:21:./.:.:.:.:.:.
chr15	71751721	HG2_Ill_GATKHC_24733	C	CTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTGTCTCTCTGTCTCTCTG	20	PASS	ClusterIDs=HG2_PB_pbsv_15518:HG3_Ill_GATKHC_24578:HG2_PB_assemblyticsPBcR_8717:HG2_Ill_GATKHC_24733:HG2_PB_HySA_28253;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_GATKHC_24733:HG3_Ill_GATKHC_24578;NumExactMatchSVs=2;ClusterMaxShiftDist=0.15625;ClusterMaxSizeDiff=0.15625;ClusterMaxEditDist=0.21875;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=-1;DistForward=9;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=99;REFWIDENED=15:71751664-71751762;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1865.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:32:0|1:27:0:0:29:./.:13:1:2:18:0/1:9:7:./.:.:.:.:.:.
chr15	72049873	HG3_Ill_MetaSV_1785	G	GATCCTCCTGCCTCAGCCTCCCGAGTAGTTGGGATTACAGGTGCACACCACTGCTCCTGGCCAGTTTTTAAAATTTTTGTAGAGACAGTCTTGCTATGCTACCCAGGCTGGTCTCAAATTCCTGGGCTCAAGCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10746:HG3_PB_pbsv_15175:HG2_PB_pbsv_15523:HG4_PB_pbsv_15428:HG4_Ill_svaba_19280:HG4_Ill_manta_3627:HG4_Ill_MetaSV_1719:HG4_Ill_GATKHCSBGrefine_10638:HG3_Ill_svaba_19465:HG3_Ill_Spiral_16035:HG3_Ill_MetaSV_1785:HG3_Ill_GATKHCSBGrefine_10201:HG3_Ill_250bpfermikitraw_20035:HG3_Ill_150bpfermikitraw_19500:HG2_PB_SVrefine2Falcon2Bionano_7696:HG2_Ill_svaba_19316:HG2_Ill_SpiralSDKrefine_5653:HG2_Ill_MetaSV_1665:HG2_Ill_GATKHCSBGrefine_10291:HG2_Ill_250bpfermikitraw_20646:HG2_Ill_150bpfermikitraw_19471:HG2_PB_HySA_28260:HG2_PB_PB10Xdip_10810:HG2_PB_PB10Xdip_10809:HG2_Ill_breakscan11_4634:HG4_PB_SVrefine2PBcRDovetail_7702:HG4_PB_SVrefine2Falcon1Dovetail_9459:HG4_Ill_SVrefine2DISCOVARDovetail_10954:HG3_PB_SVrefine2PBcRDovetail_7303:HG3_PB_SVrefine2Falcon1Dovetail_9397:HG3_Ill_SVrefine2DISCOVARDovetail_11128:HG2_PB_SVrefine2PBcRplusDovetail_3635:HG2_PB_SVrefine2PB10Xhap12_11217:HG2_PB_SVrefine2Falcon1plusDovetail_3882:HG2_Ill_SVrefine2DISCOVARplusDovetail_4320;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19471:HG2_Ill_250bpfermikitraw_20646:HG2_Ill_GATKHCSBGrefine_10291:HG2_Ill_MetaSV_1665:HG2_Ill_SpiralSDKrefine_5653:HG2_Ill_svaba_19316:HG2_PB_SVrefine2Falcon2Bionano_7696:HG3_Ill_150bpfermikitraw_19500:HG3_Ill_250bpfermikitraw_20035:HG3_Ill_GATKHCSBGrefine_10201:HG3_Ill_MetaSV_1785:HG3_Ill_Spiral_16035:HG3_Ill_svaba_19465:HG4_Ill_GATKHCSBGrefine_10638:HG4_Ill_MetaSV_1719:HG4_Ill_manta_3627:HG4_Ill_svaba_19280;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0872727;ClusterMaxSizeDiff=0.0654545;ClusterMaxEditDist=0.212766;PBcalls=14;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=133;DistBack=-21;DistForward=20;DistMin=-21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=15:72049852-72049894;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1866.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:1/1:2:22:0:5:./.:0:12:1:13:1/1:1:36:./.:.:.:.:.:.
chr15	72061734	HG2_PB_SVrefine2PBcRplusDovetail_3636	A	CCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCTGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_15524:HG4_PB_assemblyticsfalcon_8855:HG3_PB_pbsv_15176:HG2_PB_PB10Xdip_10811:HG4_PB_pbsv_15430:HG3_PB_SVrefine2Falcon1Dovetail_9398:HG2_PB_SVrefine2Falcon1plusDovetail_3883:HG3_PB_SVrefine2PBcRDovetail_7304:HG2_PB_SVrefine2PBcRplusDovetail_3636:HG2_PB_SVrefine2PB10Xhap12_11218:HG4_PB_SVrefine2Falcon1Dovetail_9460:HG3_PB_assemblyticsfalcon_8985:HG2_PB_assemblyticsfalcon_9014:HG4_Ill_GATKHCSBGrefine_10639:HG2_PB_assemblyticsPBcR_8724:HG2_PB_SVrefine2Falcon2Bionano_7697;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11218:HG2_PB_SVrefine2PBcRplusDovetail_3636:HG3_PB_SVrefine2PBcRDovetail_7304;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0632411;ClusterMaxSizeDiff=0.055336;ClusterMaxEditDist=0.307692;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=129;DistBack=-348;DistForward=342;DistMin=-348;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=468;REFWIDENED=15:72061266-72061733;PctSeqSimilarity=0.9922;PctSizeSimilarity=0.9845;PctRecOverlap=0.9845;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1867.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:0:10:1:27:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr15	72639537	HG4_Ill_MetaSV_1723	G	GCAGAAATAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10813:HG4_PB_pbsv_15433:HG3_Ill_MetaSV_1789:HG2_PB_pbsv_15528:HG4_PB_assemblyticsfalcon_8863:HG3_PB_assemblyticsfalcon_8992:HG2_PB_assemblyticsfalcon_9021:HG4_PB_SVrefine2PBcRDovetail_7706:HG3_PB_SVrefine2PBcRDovetail_7308:HG3_PB_HySA_23429:HG4_PB_SVrefine2Falcon1Dovetail_9463:HG4_Ill_MetaSV_1723:HG4_Ill_GATKHCSBGrefine_10643:HG3_PB_SVrefine2Falcon1Dovetail_9401:HG3_Ill_GATKHCSBGrefine_10204:HG2_PB_SVrefine2PBcRplusDovetail_3640:HG2_PB_SVrefine2PB10Xhap12_11222:HG2_PB_SVrefine2Falcon2Bionano_7700:HG2_PB_SVrefine2Falcon1plusDovetail_3886:HG2_10X_SVrefine210Xhap12_10754:HG4_PB_HySA_22587:HG2_PB_HySA_28266:HG2_PB_PB10Xdip_10814;NumClusterSVs=23;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_10204:HG3_PB_SVrefine2Falcon1Dovetail_9401:HG4_Ill_GATKHCSBGrefine_10643:HG4_Ill_MetaSV_1723:HG4_PB_SVrefine2Falcon1Dovetail_9463;NumExactMatchSVs=5;ClusterMaxShiftDist=0.159265;ClusterMaxSizeDiff=0.159265;ClusterMaxEditDist=0.249633;PBcalls=18;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=321;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=15:72639538-72639551;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1868.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:./.:0:16:0:2:./.:0:2:0:1:1/1:0:15:1/1:2:69:.:.:.
chr15	72688947	HG2_PB_SVrefine2Falcon2Bionano_7701	A	ACCCCCCGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCTGCTGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCAGCAGCCACCCTGTCCGGGAGGGAGGTGGGGGTCAGCCCCCGCCAGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGAGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCTGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGAGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7309:HG2_PB_HySA_28267:HG2_PB_pbsv_15529:HG2_PB_PB10Xdip_10816:HG2_PB_PB10Xdip_10815:HG3_PB_pbsv_15181:HG4_PB_pbsv_15434:HG4_PB_SVrefine2Falcon1Dovetail_9464:HG2_PB_SVrefine2Falcon1plusDovetail_3887:HG4_PB_SVrefine2PBcRDovetail_7707:HG2_PB_SVrefine2PBcRplusDovetail_3641:HG2_PB_SVrefine2PB10Xhap12_11223:HG2_PB_SVrefine2Falcon2Bionano_7701:HG3_PB_SVrefine2Falcon1Dovetail_9402;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7701:HG2_PB_SVrefine2PB10Xhap12_11223:HG2_PB_SVrefine2PBcRplusDovetail_3641:HG4_PB_SVrefine2PBcRDovetail_7707;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0321665;ClusterMaxSizeDiff=0.0283822;ClusterMaxEditDist=0.238051;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=525;DistBack=22498;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=294;REFWIDENED=15:72688948-72689241;PctSeqSimilarity=0.979;PctSizeSimilarity=0.9943;PctRecOverlap=0.6881;SizeDiff=-3;StartDistance=-163;EndDistance=-163;GTMatch=0;TruScore=88;MatchId=1869.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:./.:0:0:0:0:./.:0:1:0:0:./.:0:3:./.:4:51:.:.:.
chr15	73983310	HG2_10X_SVrefine210Xhap12_10758	T	TTATGCTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_15534:HG3_PB_pbsv_15185:HG4_PB_pbsv_15439:HG2_PB_assemblyticsfalcon_9031:HG2_PB_assemblyticsPBcR_8743:HG3_PB_assemblyticsfalcon_9002:HG2_PB_HySA_28277:HG4_PB_SVrefine2PBcRDovetail_7710:HG4_Ill_MetaSV_1724:HG4_Ill_GATKHCSBGrefine_10646:HG2_PB_SVrefine2PBcRplusDovetail_3644:HG2_PB_SVrefine2PB10Xhap12_11226:HG2_PB_SVrefine2Falcon2Bionano_7704:HG2_PB_SVrefine2Falcon1plusDovetail_3891:HG2_Ill_GATKHCSBGrefine_10295:HG2_10X_SVrefine210Xhap12_10758:HG3_Ill_MetaSV_1790:HG3_PB_HySA_23435:HG2_Ill_MetaSV_1673:HG3_PB_SVrefine2Falcon1Dovetail_9405:HG4_PB_HySA_22593:HG2_PB_PB10Xdip_10818:HG2_PB_PB10Xdip_10817:HG2_Ill_breakscan11_4635;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10758:HG2_Ill_GATKHCSBGrefine_10295:HG2_PB_SVrefine2Falcon1plusDovetail_3891:HG2_PB_SVrefine2Falcon2Bionano_7704:HG2_PB_SVrefine2PB10Xhap12_11226:HG2_PB_SVrefine2PBcRplusDovetail_3644:HG4_Ill_GATKHCSBGrefine_10646:HG4_Ill_MetaSV_1724:HG4_PB_SVrefine2PBcRDovetail_7710;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0996885;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.18238;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=323;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=15:73983311-73983319;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1870.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:87:1/1:1:19:0:30:./.:1:10:0:8:1/1:0:20:1/1:2:64:.:.:.
chr15	73993223	HG2_10X_SVrefine210Xhap12_10759	T	TCCCCTCCTCCCCTCCTCCCCCTCCCCTCCTCCCCTCCTCCCCCCATCCTCCCCTCCTTCTCCACTCTCCGTCCTCCCCTCTTCCCCCCTCCCCTCCTCCTCCTCCTCCTCCCCCCTCCTG	20	PASS	ClusterIDs=HG4_PB_pbsv_15440:HG2_PB_pbsv_15535:HG3_PB_assemblyticsfalcon_9004:HG2_PB_assemblyticsfalcon_9032:HG2_PB_PB10Xdip_10820:HG2_PB_PB10Xdip_10819:HG2_PB_HySA_28278:HG3_PB_HySA_23436:HG3_PB_SVrefine2Falcon1Dovetail_9407:HG2_PB_SVrefine2Falcon1plusDovetail_3892:HG3_PB_pbsv_15186:HG4_PB_HySA_22594:HG3_PB_SVrefine2PBcRDovetail_7312:HG4_PB_SVrefine2PBcRDovetail_7711:HG2_PB_SVrefine2PBcRplusDovetail_3645:HG2_PB_SVrefine2PB10Xhap12_11227:HG2_PB_SVrefine2Falcon2Bionano_7705:HG2_10X_SVrefine210Xhap12_10759:HG3_PB_SVrefine2Falcon1Dovetail_9406;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10759:HG2_PB_SVrefine2Falcon2Bionano_7705:HG2_PB_SVrefine2PB10Xhap12_11227:HG2_PB_SVrefine2PBcRplusDovetail_3645:HG4_PB_SVrefine2PBcRDovetail_7711;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0916667;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.2;PBcalls=18;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=120;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=24;REFWIDENED=15:73993224-73993247;PctSeqSimilarity=0.9887;PctSizeSimilarity=0.9756;PctRecOverlap=0.9106;SizeDiff=-3;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=95;MatchId=1871.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:0:18:1:23:./.:0:15:2:9:./.:0:4:./.:.:.:.:.:.
chr15	74508950	HG2_PB_PB10Xdip_10821	T	CACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACCACGCCCGGCTAACTTTTTGTATTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCATCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGATGTGAGCCACCACACCTGGCCAATACCACTTTTAGACTTGGTATCTTTTACTTTATGAAAATGATGCATTTCAGTCAATGTAACTTCAAGTGAGCTTTTTTTTGAATGAAATCAATGCTGTCTATAAATGTTCTCTTTAGACTCAGAAGTGTACTACAGTTTTGGGGTACAGAATTCCCTGTTCTCTAATATAATACATTTAAATCTTTGAGCCCAGTCCCAGGACATGTTTAGTAGGGGTAAGTGTAGATAGAATTCTGAGGTTCAGATCTCAACAGCTACTCACTAGCCATGTGATCTTGGATGAATTTCCTGACATTCTCTCAGCCTTGGATTCTTCATTTGTAAAAGGGGGAATAATTATATCTACTCACAGAGCCATGTCGAGTGCCTGGTATCCAGTGGCTGCTCAACAAAGAGTTGAGGCTGATGATGATGATATTGGGTAATGATGATGGTGATGGGGGTAATAATGATGGTGATGTAGGTAATGATGGTGATGTTGGTGATGCTGCTGCTGCTGGCGATGGTGGTGGTGGTGACTGTGATGATGGTGGTTATAGTGATGGTGGTGGTGACAGTAGTGGTGATAGTGATGGTGGTGATGGTGGTGATGACTGTGCTAGTGATGGTGGTGACAGTAGTGGTGGAGGTGATCGTGATGGTGGTGGTGGTGATAATGGTGATGACAGTGATGGTGATGATGGTGATGGTGGTGGTGGCTATGGTGATAGTGGTGATGGAGGTGGTGGTGATGATGGTGAATGTGGTGGTGATGGTGGTGGTGGTCGTGGTGATAGAGGTGGTGGTGATGATGGTGGTGATGACTGTGCTGGTGGTGGTGGTGATGATGGTGATGATGGTGATGGTGGTGGTGACTGTGGTGGTGGTGATGATGGTGATGATGGTGATGGTGGTGGTGACTGTGGTGGTGGTGGTGATGATGGTGATGATGGTGATGGTGGTGGTGACTGGTGGTGGTGGTGATGGTGGTGGTGATGATGATGGTGGTGGTGATGGTGATAGTGGTGGTGACTGTGGTGGTGGTGATGATGGTGGTGATGATGGTGATGGTGGTGGTGACTGTGGTGGTGGTGGGGATGATGGTGATGGTGGTGGTGATTGTGGTGATGATGGTGGTGATGATGGTGATGGTGGTGGTGACTATGGTGGTGGTGACAGTAGTGATGATGGTGATGGTGGTGGTGGTGATGGTAGAGATAGTTCTTACTGAGGGGAGTCCTGAATCTCCCATCTCCCATTGGGTAACACCAAGACCCAGAGTCAGGGAGAATGGATTCCAGCTTGATAACTCTTTGGTGTAAGAGGCTCTGGGCTGTCTGCAAAGTGAAGCTGTGCCTCACATTGTGAGTCTTGATTAAGAAGGTAAACTAGGCCGGGTGCGGTGGCTCACGCCTGTAATCCTAACGCTTTGGGAAGCCAAGGCAGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGCCCAACATGGTGAAACCCTGCCTCCACTAAACATACAAAAATTAGCTGGGCATGGTAGCGCATGCCTGTAGTCCCAGCTACTTGGGAGGCTGATGCAGGAGAATGGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCCTGC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_10821:HG4_PB_pbsv_15442:HG2_PB_pbsv_15536:HG2_PB_HySA_28281:HG3_PB_SVrefine2Falcon1Dovetail_9409:HG2_PB_SVrefine2Falcon1plusDovetail_3893:HG2_PB_SVrefine2PBcRplusDovetail_3646:HG2_PB_SVrefine2PB10Xhap12_11228:HG3_PB_SVrefine2PBcRDovetail_7313:HG4_PB_SVrefine2Falcon1Dovetail_9465:HG4_PB_SVrefine2PBcRDovetail_7712:HG4_PB_HySA_22597:HG2_PB_PB10Xdip_10822;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_10821:HG2_PB_PB10Xdip_10822;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0437333;ClusterMaxSizeDiff=0.0426667;ClusterMaxEditDist=0.17348;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1839;DistBack=56332;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=15:74508951-74508957;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9995;PctRecOverlap=0.9989;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1872.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:85:1/1:1:10:0:14:./.:0:2:1:3:1/1:0:9:1/1:9:338:.:1958:.
chr15	74844654	HG2_10X_SVrefine210Xhap12_10761	G	GGCCTCCCAAAGTGCTGGGATTGCAGGCGTGTGCCACCGTGCCCAGCCGGCCTTCCTTCCTTCCTTCCTTTTTTAGACAGGGTCTCACTCTGTTGCACAGATTAGAGTGCAGTGGCACAAACACAGCTCACTGCAGCCTTGACCTCTTGAGCTCAGGTGATCCTCCTGCCTCAGCCTGCTGAGTAACTGGGACTACAGGCATGCATCACTATTCCTGACTAATTTTATTTTTGTGAGATGGGGTCTCACCATGTTCCCCAGGCTGGTCTTAAACTCCTGGACGCAAGCAATCCTCCCACTTCGGCCTCCCAGAGTGTGGGGATTACATGCATGAGCCACTGCACCCGATCTGTTTATTTTCCTTTACCTCTTCAACTGTTTCTCTTCTGTCCAGCCTCTGAAATGCTAAGTTCCCCAGGGTTTACTTCTAAGCTTACTTCTGTGTATGTTCTCCCTGAGCAGTTTCACTCTCATGGCTTTAAATACTATCTGTAAGCCAGTGGGACTCCAGTGTATATTGTTTGAGCCCACATTTCTAGTCTAAGGTATCTCCAACTCCCTGCTTGGCATTTCTGTTGAGACGTTTTACTAGCATCTCAAATTTAATACCTGTGAGACTGAACTTTTGATTTCCAACCTACTCCCCTACAATTACTTCCTCCTTTACTGTCCTTCTCAGTAAATGGCATTTCTGTCCACTTATTCATATCAAAACCTTAGAGTTGACTGTCTTTCATACCTCCTGCTCTTTTACTCCCTATGTCTAGTCCATCACCAAGTCTTAGCAGCTGTCTCATCTAAGTATCTAGATATTGCCACTCCTGCCTTCTGCATCGTCACCTACCTGGTCCAGACTACCTACCTACCACTATAGCTCTCAACAGGTTTCTGTGCCCACCCCCTCCCCCATTCTAATCCATGCTCTACACAGCAGCTAGAGCCATCTTCTAAGAAACAAATCAGATTATGTCACTGTGTTAATGCCCTCCAAGTATGATGTCAGTTGCTCTAATTATAAAACCCAAAATCTGCATGATCTGACCCTTGCCTACTTATCCAGGCTTATCTTTGACAATCTCTTGGTCTATCACTGTGCTCCAGTTACCCTGACCTTTGCATATGCTGGTCCTTCTGTCTAGAACACTCTTGTCTAGGCAAACTTACTCAGCCTTCGGGTCGCTCCTTTAACCGTCACTTCCTCTAAGGCGTTGTCTTCACTCTTAGTGTAGATCAGGTCCTCCTGTTATGTCCCTGTCATTGAACATTATACTTTTATATTTGTACAGTTCTTTTGTTTATTTCTTTGGTATCTGATTTCTATTCTAGATGGTAAGCTCCAAGAGGACAGGGACCATGTTTGTTTTGCTTATCATTGTACCCTAGCACCCAACAGTGATGGCACATGGTAGGCACTCAAATACTGGTTTCTTCCACTTTCTATGGTTTATTCTGTTCCTTTTTAAATGCAAAGGCTCCATTTCTTTTGTTTTGTTTTGTTTTGAGACAGGATCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCATGGCTCACCTCAGCCTCAACCTCCTGGGCTCAGGTTGATTCTCCCACCTTGGCCTCCTAGGGATTACAGTCCCTCCTTGGGACTACAGGCATGCACCACCATACCCAGCTAACTTTTGTTATTTTTTGTAGAGGTGGGGTTTCACCATGTTGCCCAAGCTGGTCTTGAACTCCTAGGCTCAAGCAATTCACCCTCCTTGGTCTCCCAAAGTGCTGGGGTTACAGGCATGAGCCACTGTGCCTGGCCTTCCATTTTGTTTGTTTAAAATAGATTTTACTTTTTTAGATCAGTTTTAGGTTCACAGCAAAATTGAGCAGAATGTGCAGAGATTTCCCATATGCCTCCTCCTCCCACACCTGCACAACCTCCTGTCAAAATCCTGCACCAGAGTAGTATGTTTGTTATAACTGATGAACCTACATTGACACATCATTATCACGCAGAGTCCATAGTTTAGTGTTCTTGATACTGTGTATTCCATGGAATTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTTGTTGCCCAGGCTAGAGCGCAATGGCGCCATCTCCGCTCACCGCAACCTACACCTCCCAGGTTCAAGCGGTTCTCCTGCTTCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9466:HG4_PB_HySA_22598:HG3_PB_HySA_23439:HG2_PB_pbsv_15537:HG2_PB_PB10Xdip_10823:HG3_PB_assemblyticsfalcon_9007:HG2_PB_assemblyticsfalcon_9036:HG2_PB_HySA_28283:HG3_PB_SVrefine2Falcon1Dovetail_9410:HG2_PB_SVrefine2Falcon1plusDovetail_3894:HG4_PB_SVrefine2PBcRDovetail_7713:HG4_Ill_SVrefine2DISCOVARDovetail_10971:HG3_Ill_SVrefine2DISCOVARDovetail_11145:HG2_PB_SVrefine2PBcRplusDovetail_3647:HG2_PB_SVrefine2PB10Xhap12_11229:HG2_Ill_SVrefine2DISCOVARplusDovetail_4330:HG2_10X_SVrefine210Xhap12_10761:HG3_PB_SVrefine2PBcRDovetail_7314;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10761:HG2_Ill_SVrefine2DISCOVARplusDovetail_4330:HG2_PB_SVrefine2PB10Xhap12_11229:HG2_PB_SVrefine2PBcRplusDovetail_3647:HG3_Ill_SVrefine2DISCOVARDovetail_11145:HG4_Ill_SVrefine2DISCOVARDovetail_10971;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0721054;ClusterMaxSizeDiff=0.0721054;ClusterMaxEditDist=0.149233;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=2153;DistBack=84332;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=27;REFWIDENED=15:74844655-74844681;PctSeqSimilarity=0.9995;PctSizeSimilarity=1;PctRecOverlap=0.9944;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=99;MatchId=1873.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:94:./.:0:0:0:0:./.:0:0:0:0:1/1:0:38:1/1:12:332:.:2245:.
chr15	75773737	HG2_PB_SVrefine2Falcon2Bionano_7706	C	CAGCCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7706:HG3_PB_assemblyticsfalcon_9020:HG3_PB_SVrefine2Falcon1Dovetail_9412:HG4_PB_SVrefine2PBcRDovetail_7715:HG3_PB_pbsv_15195:HG4_PB_SVrefine2Falcon1Dovetail_9468:HG4_PB_pbsv_15447:HG3_PB_SVrefine2PBcRDovetail_7318:HG2_PB_pbsv_15541:HG2_PB_SVrefine2PBcRplusDovetail_3650;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7706:HG4_PB_SVrefine2PBcRDovetail_7715:HG3_PB_SVrefine2PBcRDovetail_7318:HG2_PB_SVrefine2PBcRplusDovetail_3650;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.268041;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=402;DistBack=122714;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=480;REFWIDENED=15:75773738-75774217;PctSeqSimilarity=0.9802;PctSizeSimilarity=1;PctRecOverlap=0.4988;SizeDiff=0;StartDistance=-202;EndDistance=-202;GTMatch=0;TruScore=82;MatchId=1875.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:1/1:0:13:1:15:./.:0:0:0:1:./.:0:2:1/1:2:46:.:.:.
chr15	75795917	HG2_Ill_GATKHCSBGrefine_10298	T	TCCGTCCGGGAGGGAGGTGGGGGCGGTCAGCCCGCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGAGTCAGCCCCCCACCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCAGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7707:HG3_PB_assemblyticsfalcon_9021:HG4_PB_SVrefine2Falcon1Dovetail_9469:HG4_PB_pbsv_15448:HG2_PB_SVrefine2PB10Xhap12_11233:HG2_Ill_GATKHCSBGrefine_10298:HG3_PB_SVrefine2Falcon1Dovetail_9413:HG3_PB_pbsv_15196:HG2_PB_pbsv_15542:HG2_PB_PB10Xdip_10827:HG2_PB_PB10Xdip_10826:HG2_PB_SVrefine2PB10Xhap12_11232:HG2_PB_SVrefine2PBcRplusDovetail_3651:HG3_PB_SVrefine2PBcRDovetail_7319;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10298:HG2_PB_SVrefine2PB10Xhap12_11233;NumExactMatchSVs=2;ClusterMaxShiftDist=0.101781;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.219451;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=197;DistBack=26;DistForward=34;DistMin=26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=572;REFWIDENED=15:75795853-75796424;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1876.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:42:1/1:0:20:1:4:./.:3:0:0:2:./.:1:11:./.:.:.:.:.:.
chr15	76372645	HG2_PB_SVrefine2Falcon1plusDovetail_3897	A	ATGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACCCTGTCTCAAAAAAAATAAATAAAAAATAAATCCTAAAGGCACCATTTCTTTTTTTGTTTGTTTTGTTTTGCCTTGTTTTTTTGTGAGACAGTCTCTCTCTGTCACCCAGGCTGGAG	20	PASS	ClusterIDs=HG4_PB_pbsv_15449:HG3_PB_pbsv_15197:HG2_PB_pbsv_15543:HG3_PB_assemblyticsfalcon_9024:HG2_PB_assemblyticsfalcon_9055:HG2_PB_assemblyticsPBcR_8764:HG4_PB_assemblyticsfalcon_8888:HG2_PB_PB10Xdip_10828:HG3_PB_HySA_23451:HG4_PB_HySA_22607:HG4_Ill_manta_3631:HG4_Ill_SVrefine2DISCOVARDovetail_10975:HG4_Ill_MetaSV_1728:HG4_Ill_GATKHCSBGrefine_10649:HG4_Ill_150bpfermikitraw_19591:HG3_PB_SVrefine2PBcRDovetail_7320:HG3_PB_SVrefine2Falcon1Dovetail_9414:HG3_Ill_manta_3485:HG3_Ill_Spiral_16048:HG3_Ill_SVrefine2DISCOVARDovetail_11155:HG3_Ill_MetaSV_1791:HG3_Ill_GATKHCSBGrefine_10211:HG2_PB_SVrefine2PBcRplusDovetail_3652:HG2_PB_SVrefine2PB10Xhap12_11234:HG2_PB_SVrefine2Falcon2Bionano_7708:HG2_PB_SVrefine2Falcon1plusDovetail_3897:HG2_Ill_manta_4274:HG2_Ill_SVrefine2DISCOVARplusDovetail_4337:HG2_Ill_MetaSV_1676:HG2_Ill_GATKHCSBGrefine_10299:HG2_10X_SVrefine210Xhap12_10768:HG4_PB_SVrefine2Falcon1Dovetail_9470:HG4_PB_SVrefine2PBcRDovetail_7716;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10768:HG2_Ill_GATKHCSBGrefine_10299:HG2_Ill_MetaSV_1676:HG2_Ill_SVrefine2DISCOVARplusDovetail_4337:HG2_Ill_manta_4274:HG2_PB_SVrefine2Falcon1plusDovetail_3897:HG2_PB_SVrefine2Falcon2Bionano_7708:HG2_PB_SVrefine2PB10Xhap12_11234:HG2_PB_SVrefine2PBcRplusDovetail_3652:HG3_Ill_GATKHCSBGrefine_10211:HG3_Ill_MetaSV_1791:HG3_Ill_SVrefine2DISCOVARDovetail_11155:HG3_Ill_Spiral_16048:HG3_Ill_manta_3485:HG3_PB_SVrefine2Falcon1Dovetail_9414:HG3_PB_SVrefine2PBcRDovetail_7320:HG4_Ill_150bpfermikitraw_19591:HG4_Ill_GATKHCSBGrefine_10649:HG4_Ill_MetaSV_1728:HG4_Ill_SVrefine2DISCOVARDovetail_10975:HG4_Ill_manta_3631;NumExactMatchSVs=21;ClusterMaxShiftDist=0.110787;ClusterMaxSizeDiff=0.110787;ClusterMaxEditDist=0.209632;PBcalls=18;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=171;DistBack=3739;DistForward=63905;DistMin=3739;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=15:76372646-76372652;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1877.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:./.:0:0:0:0:./.:0:8:0:4:./.:5:43:./.:.:.:.:.:.
chr15	76522855	HG3_PB_assemblyticsfalcon_9026	C	CCGCGCCCGGCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTACTCAGGCTGGAGTGCAGTGACGCAAT	20	PASS	ClusterIDs=HG4_PB_pbsv_15451:HG2_PB_PB10Xdip_10830:HG2_PB_pbsv_15544:HG3_PB_pbsv_15199:HG2_PB_PB10Xdip_10829:HG2_PB_assemblyticsPBcR_8765:HG4_PB_assemblyticsfalcon_8890:HG3_PB_assemblyticsfalcon_9026:HG2_PB_assemblyticsfalcon_9056:HG2_Ill_GATKHCSBGrefine_10300:HG4_Ill_GATKHCSBGrefine_10651:HG3_Ill_GATKHCSBGrefine_10213:HG3_PB_HySA_23453:HG4_PB_HySA_22608;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10300:HG2_PB_assemblyticsfalcon_9056:HG3_PB_assemblyticsfalcon_9026:HG4_PB_assemblyticsfalcon_8890;NumExactMatchSVs=4;ClusterMaxShiftDist=0.159509;ClusterMaxSizeDiff=0.121951;ClusterMaxEditDist=0.25731;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=-182;DistForward=28861;DistMin=-182;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=15:76522854-76522857;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9882;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1878.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:83:./.:0:0:0:0:./.:0:0:0:0:1/1:0:13:./.:.:.:.:.:.
chr15	76883583	HG2_Ill_MetaSV_1677	C	CAAGACAGCAATAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_10831:HG2_PB_pbsv_15545:HG3_PB_pbsv_15200:HG3_PB_HySA_23454:HG2_PB_HySA_28312:HG2_Ill_breakscan11_4637:HG2_PB_SVrefine2Falcon1plusDovetail_3898:HG3_Ill_MetaSV_1792:HG2_Ill_MetaSV_1677:HG2_PB_SVrefine2PBcRplusDovetail_3653:HG3_PB_SVrefine2PBcRDovetail_7321:HG2_PB_SVrefine2PB10Xhap12_11235:HG4_PB_SVrefine2Falcon1Dovetail_9472:HG2_PB_PB10Xdip_10832;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_1677:HG3_Ill_MetaSV_1792;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0939794;ClusterMaxSizeDiff=0.090776;ClusterMaxEditDist=0.188202;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=347;DistBack=29093;DistForward=1012;DistMin=1012;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=15:76883584-76883596;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9942;PctRecOverlap=0.9942;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1879.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:43:./.:0:0:0:0:./.:19:0:0:3:0/1:33:15:0/1:4:17:12222:.:.
chr15	77092485	HG2_Ill_SVrefine2DISCOVARplusDovetail_4344	T	TATACATGGATATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCAGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4638:HG3_PB_pbsv_15202:HG4_PB_HySA_22614:HG2_PB_pbsv_15548:HG4_Ill_MetaSV_1730:HG2_PB_assemblyticsPBcR_8767:HG2_PB_assemblyticsfalcon_9058:HG4_PB_assemblyticsfalcon_8895:HG4_Ill_GATKHCSBGrefine_10652:HG4_PB_pbsv_15453:HG3_Ill_GATKHCSBGrefine_10214:HG2_PB_SVrefine2PBcRplusDovetail_3655:HG2_PB_SVrefine2PB10Xhap12_11237:HG2_PB_SVrefine2Falcon2Bionano_7710:HG2_Ill_SVrefine2DISCOVARplusDovetail_4344:HG2_Ill_MetaSV_1679:HG2_Ill_GATKHCSBGrefine_10301:HG4_Ill_SVrefine2DISCOVARDovetail_10977:HG2_PB_SVrefine2Falcon1plusDovetail_3900:HG2_PB_PB10Xdip_10834:HG2_PB_PB10Xdip_10833:HG2_10X_SVrefine210Xhap12_10771:HG4_PB_SVrefine2Falcon1Dovetail_9474:HG2_PB_HySA_28313;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10301:HG2_Ill_MetaSV_1679:HG2_Ill_SVrefine2DISCOVARplusDovetail_4344:HG2_PB_SVrefine2Falcon2Bionano_7710:HG2_PB_SVrefine2PB10Xhap12_11237:HG2_PB_SVrefine2PBcRplusDovetail_3655:HG3_Ill_GATKHCSBGrefine_10214:HG4_Ill_GATKHCSBGrefine_10652;NumExactMatchSVs=8;ClusterMaxShiftDist=0.174216;ClusterMaxSizeDiff=0.174216;ClusterMaxEditDist=0.266447;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=285;DistBack=24330;DistForward=35762;DistMin=24330;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=15:77092486-77092501;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1880.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:13:63:./.:2:1:0:3:./.:0:4:0:2:1/1:0:29:./.:.:.:.:.:.
chr15	77761579	HG2_PB_HySA_28322	T	TAAGAACATACAAACAGGCCGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_28322:HG3_PB_HySA_23461:HG3_PB_assemblyticsfalcon_9032:HG3_PB_pbsv_15206:HG2_PB_pbsv_15552:HG4_PB_pbsv_15455:HG4_PB_HySA_22619:HG4_PB_assemblyticsfalcon_8899:HG2_PB_SVrefine2PBcRplusDovetail_3657:HG4_PB_SVrefine2PBcRDovetail_7719:HG3_PB_SVrefine2Falcon1Dovetail_9419:HG4_PB_SVrefine2Falcon1Dovetail_9476:HG2_PB_SVrefine2PB10Xhap12_11239;NumClusterSVs=13;ExactMatchIDs=HG2_PB_HySA_28322;NumExactMatchSVs=1;ClusterMaxShiftDist=0.133942;ClusterMaxSizeDiff=0.133942;ClusterMaxEditDist=0.207002;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=324;DistBack=34878;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=15:77761580-77761595;PctSeqSimilarity=0.9893;PctSizeSimilarity=0.9848;PctRecOverlap=0.9878;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1881.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:37:0|1:21:1:0:28:1|0:0:9:21:0:0/1:28:13:0/1:7:30:.:.:.
chr15	77991613	HG2_PB_SVrefine2Falcon1plusDovetail_3904	A	ACCCTGCACACAGTAAGTGCATACTAACCGTCATCCCTACACACAGTAAATACATACTAACCATCATCCCCGCACACAGTAAGTGCATACTAACCATCATCAGCACACAATAAGCACATACTAACCATCATCCCCACACACAGTAAGTGCATACAAACCATCCCCACATAGTAAACACATACTAACCACCACCTGCACACAGTAAGCACATACTAACCATCATCTCCACACACAATAAGCACATACTATTATCCCCACACACAGTAAGTGCATACTAACCATCCCTGCACACAGTAAAGCACATACTAACCATCCCCGCACACAGTAAACACATACTAACCATCATCTGCACAAACTAAACACATACTAACCATCATCTGCATACAGTAAGCACATACTAACCATCATCTGCACACAGTAAGCACATACTAACCATCATTCCCACACACAATAAGCACATACTAACCATCACCTGCACACAGTAAGCACATACTAACCATCACCTGCACACAGTAAGTACATACTAACCATCACCTGCACACAGTAAGCACATACTAACCATCACCTGCACACAGCACATACTAACCATCCTGCACACAGTAAGCACATACTAACCATCACCTGCACACAGTAAGCACATACTAACCATCATCTGCACACAGTAAGCACATACTAACCATCATCTGCACACAGTAAACACATACTAACCATCTGCACACAGTAAGCACATACTAACCATCATTCCCACACACAGTAAGCACATACTAACCATCACCTGCACACAGTAAGCACATACTAACCATCACCTGCATACAGTAAGCACATACTAACCATCACTGCACACAGTAAGCACATACTAACCATCACCTGCACACAGTAAGCACATACTAACCATCACCTGCACACAGTAAGCACATACTAACCACCACCTGCACACAGTAAGCACATACTAACCATCACCTGCACACAGTAAGCACATACTAACCATCACCTGCACACAGTAAGCACATACTAACCATCACCTGCACACAGTAAGCACATACTAACCATCATCTGCACACAGTAAGCACATACTAACCATCATCTGCACACAGTAAGCACATACTAACCATCATCCGCACACAGTAAGCACATACTAACCATCATCCCCACACAGTAAGCACATACTAACCGTCATCCCCACACACAGTAAGTGCATCCTAACCATCCCCCACACAGTAAACACATACTAACCATCTTCTGCACACAGTAATCACATACTAACCATCATCCCCGCACACAGTAAGCACATACTAACCACCATCCCCACACACAGTAAGCACATACTAACCACCGTCCCCACACACAGTAAGCACATACTAGCCATCATCCCTGCACACAGTAAGCACATACTAACCACCATCCCCACACACAGTAAGCACATACTAACCATCATCCCCACACACAGTAAGCACATACTAACCACCATCCCCGCACACAGTAAGCACATACTAACCATCATCCACACACAGTAAGTGCATACTAACCATCATCCCCACACACAGTAAGTGCATACTAACTGTCATCTCTGCACACGGTAAGCACATATTAACCATCATCCACACACAGTAAGTGCATACTAACCATCCCCGCACACAGTAAACACATACTATCATCTGCACACAGTAAGCACATACTAACCATCCCTGCACACAGTAAACACATACTAACCATCATCTGCACACAGTAAACACATACTAACCATCATCTGCACACAGTAAACACATACTAACCATCATCCGCACACAGTAAGCACATACGAACCACCATCCGCACACAGTAAGCACATACTAACCACCATCCCCACACAGTAAGCACATACTAACCACCATCCCCACACACAGTAAGCACATACTAACCACCATCCCCACACACAGTAAGCACATACTAACCATCATTCCTGCACAGTAAGCACAGACTAACCACCATCCCACACACAGTAAGCACATACTAACCACCAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7721:HG2_PB_HySA_28327:HG2_PB_HySA_28326:HG4_PB_pbsv_15457:HG2_PB_pbsv_15554:HG3_PB_pbsv_15209:HG3_PB_HySA_23465:HG2_Ill_breakscan11_4640:HG4_PB_HySA_22623:HG4_PB_SVrefine2Falcon1Dovetail_9478:HG3_PB_SVrefine2Falcon1Dovetail_9421:HG2_PB_SVrefine2Falcon1plusDovetail_3904:HG2_PB_SVrefine2PBcRplusDovetail_3659:HG2_PB_SVrefine2PB10Xhap12_11242:HG3_PB_SVrefine2PBcRDovetail_7325;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3904;NumExactMatchSVs=1;ClusterMaxShiftDist=0.182651;ClusterMaxSizeDiff=0.182651;ClusterMaxEditDist=0.225739;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1999;DistBack=16993;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=502;REFWIDENED=15:77991614-77992115;PctSeqSimilarity=0.9791;PctSizeSimilarity=0.9876;PctRecOverlap=0.7605;SizeDiff=-25;StartDistance=-472;EndDistance=-472;GTMatch=0;TruScore=90;MatchId=1882.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:2:30:0:17:./.:18:6:22:3:0/0:15:0:1/1:4:247:.:2148:.
chr15	78068868	HG2_PB_SVrefine2PB10Xhap12_11243	A	AAGGCAGGAAAGCAGGAAGGCAGGAAGGCAGGAAGCAGGAAGGCAGGAAAGCAGGAAGGCAGGAAGGCAGGAAGGCAGGAAGGGAGTAAGGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7722:HG4_Ill_SVrefine2DISCOVARDovetail_10983:HG2_PB_SVrefine2PBcRplusDovetail_3660:HG2_PB_SVrefine2PB10Xhap12_11243:HG2_PB_PB10Xdip_10843:HG2_PB_PB10Xdip_10844:HG2_PB_HySA_28329;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11243;NumExactMatchSVs=1;ClusterMaxShiftDist=0.240385;ClusterMaxSizeDiff=0.240385;ClusterMaxEditDist=0.25;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=91;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=15:78068867-78068872;PctSeqSimilarity=0.9154;PctSizeSimilarity=0.8426;PctRecOverlap=0.8349;SizeDiff=-17;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=86;MatchId=1883.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:35:./.:10:27:16:6:./.:2:6:8:20:0/1:3:18:./.:.:.:.:.:.
chr15	78424618	HG2_Ill_MetaSV_1682	C	CTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTCCAGTGGCGCGATCTCAGCTCACTGCAACCTCCGCCTCCTTGGTTCAGGTGATTCTCCCACCTCAGCCTCCCCAGTAGCTGGGACCGCAGGCGTGCACCACCATGCCCAGATAAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7725:HG2_PB_pbsv_15559:HG3_PB_pbsv_15213:HG3_PB_HySA_23471:HG2_PB_HySA_28334:HG3_Ill_SVrefine2DISCOVARDovetail_11161:HG3_Ill_GATKHCSBGrefine_10221:HG4_Ill_SVrefine2DISCOVARDovetail_10985:HG4_Ill_MetaSV_1735:HG4_Ill_GATKHCSBGrefine_10656:HG2_PB_SVrefine2Falcon1plusDovetail_3906:HG2_Ill_MetaSV_1682:HG2_Ill_GATKHCSBGrefine_10304:HG4_PB_HySA_22631:HG3_PB_SVrefine2PBcRDovetail_7326:HG2_PB_SVrefine2PB10Xhap12_11245:HG3_PB_SVrefine2Falcon1Dovetail_9424:HG4_PB_pbsv_15462;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10304:HG2_Ill_MetaSV_1682:HG2_PB_SVrefine2Falcon1plusDovetail_3906:HG4_Ill_GATKHCSBGrefine_10656:HG4_Ill_MetaSV_1735:HG4_Ill_SVrefine2DISCOVARDovetail_10985;NumExactMatchSVs=6;ClusterMaxShiftDist=0.297735;ClusterMaxSizeDiff=0.291262;ClusterMaxEditDist=0.344595;PBcalls=11;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=164;DistBack=-173;DistForward=-1;DistMin=-173;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=173;REFWIDENED=15:78424619-78424791;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1884.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:0|1:23:3:1:26:1|0:1:11:8:0:0/1:28:14:./.:.:.:.:.:.
chr15	79237960	HG2_PB_PB10Xdip_10852	C	CACCCCCTATGTCCCTGCCTGTCCCCACCTCCCACCCCCATGTCCCTGCCTGTCCCCACCTCG	10	PASS	ClusterIDs=HG4_PB_pbsv_15467:HG2_PB_HySA_28342:HG2_PB_PB10Xdip_10852:HG3_PB_pbsv_15218:HG2_PB_pbsv_15564;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_10852;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0615385;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.242424;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=62;DistBack=28;DistForward=64;DistMin=28;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=15:79237959-79237961;PctSeqSimilarity=0.9921;PctSizeSimilarity=0.9841;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1885.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:37:1/1:1:7:2:9:./.:5:8:7:5:./.:0:0:./.:.:.:.:.:.
chr15	79795872	HG4_Ill_GATKHCSBGrefine_10665	T	TCACATACATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_Ill_GATKHCSBGrefine_10665:HG4_PB_pbsv_15470:HG3_PB_SVrefine2Falcon1Dovetail_9426:HG2_PB_pbsv_15566:HG4_Ill_MetaSV_1737;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_10665:HG4_Ill_MetaSV_1737;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0523077;ClusterMaxSizeDiff=0.0492308;ClusterMaxEditDist=0.228916;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=3513;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=15:79795873-79795885;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1887.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:26:0|1:38:1:1:20:./.:0:2:31:0:0/1:33:7:0/1:7:32:.:.:.
chr15	80648150	HG2_Ill_Krunchall_21052	A	ATATCTAAGCTGCAGCTGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACCTGAGGTGGGAGTTGGAG	20	PASS	ClusterIDs=HG3_PB_HySA_23491:HG3_PB_pbsv_15223:HG4_PB_SVrefine2Falcon1Dovetail_9485:HG4_Ill_SVrefine2DISCOVARDovetail_10999:HG3_PB_SVrefine2PBcRDovetail_7330:HG3_Ill_SVrefine2DISCOVARDovetail_11172:HG4_PB_pbsv_15479:HG4_Ill_svaba_19335:HG4_Ill_manta_3641:HG4_Ill_Krunchall_21358:HG4_Ill_GATKHCSBGrefine_10673:HG4_Ill_250bpfermikitraw_20354:HG4_Ill_150bpfermikitraw_19613:HG3_PB_SVrefine2Falcon1Dovetail_9427:HG3_Ill_svaba_19515:HG3_Ill_manta_3489:HG3_Ill_Spiral_16064:HG3_Ill_Krunchall_20633:HG3_Ill_GATKHCSBGrefine_10226:HG3_Ill_250bpfermikitraw_20089:HG3_Ill_150bpfermikitraw_19543:HG2_Ill_svaba_19368:HG2_Ill_SpiralSDKrefine_5687:HG2_Ill_Krunchall_21052:HG2_Ill_GATKHC_24805:HG2_Ill_GATKHCSBGrefine_10316:HG2_Ill_250bpfermikitraw_20693:HG2_Ill_150bpfermikitraw_19521:HG4_PB_HySA_22654:HG2_PB_pbsv_15575;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19521:HG2_Ill_250bpfermikitraw_20693:HG2_Ill_GATKHCSBGrefine_10316:HG2_Ill_GATKHC_24805:HG2_Ill_Krunchall_21052:HG2_Ill_SpiralSDKrefine_5687:HG2_Ill_svaba_19368:HG3_Ill_150bpfermikitraw_19543:HG3_Ill_250bpfermikitraw_20089:HG3_Ill_GATKHCSBGrefine_10226:HG3_Ill_Krunchall_20633:HG3_Ill_Spiral_16064:HG3_Ill_manta_3489:HG3_Ill_svaba_19515:HG3_PB_SVrefine2Falcon1Dovetail_9427:HG4_Ill_150bpfermikitraw_19613:HG4_Ill_250bpfermikitraw_20354:HG4_Ill_GATKHCSBGrefine_10673:HG4_Ill_Krunchall_21358:HG4_Ill_manta_3641:HG4_Ill_svaba_19335;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0618557;ClusterMaxSizeDiff=0.0412371;ClusterMaxEditDist=0.172589;PBcalls=8;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=12;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=94;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:80648151-80648150;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1888.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:43:0|1:22:3:3:36:0|1:14:0:0:6:0/1:27:10:./.:.:.:.:.:.
chr15	80654723	HG2_Ill_breakscan11_4642	T	AAGAAGACTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTCGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4642:HG3_PB_SVrefine2Falcon1Dovetail_9428:HG2_PB_HySA_28359:HG2_PB_pbsv_15576:HG2_Ill_MetaSV_1688:HG3_PB_pbsv_15224:HG3_PB_SVrefine2PBcRDovetail_7331:HG4_PB_SVrefine2Falcon1Dovetail_9486:HG3_PB_HySA_23492;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_breakscan11_4642;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0704441;ClusterMaxSizeDiff=0.070229;ClusterMaxEditDist=0.264438;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=323;DistBack=6572;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=314;REFWIDENED=15:80654724-80655037;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1889.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:30:0|1:35:0:0:28:0|1:22:0:0:10:0/1:22:16:0/1:6:28:.:.:.
chr15	80662566	HG3_Ill_MetaSV_1798	T	TGTCTTGTCCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGCCTCCCAGGTTCACGCCTTTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7332:HG3_PB_pbsv_15225:HG2_PB_pbsv_15577:HG2_PB_assemblyticsfalcon_9092:HG3_Ill_MetaSV_1798:HG2_PB_SVrefine2Falcon1plusDovetail_3913:HG3_PB_HySA_23493:HG3_PB_SVrefine2Falcon1Dovetail_9429;NumClusterSVs=8;ExactMatchIDs=HG3_Ill_MetaSV_1798;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0780031;ClusterMaxSizeDiff=0.0655226;ClusterMaxEditDist=0.220497;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=131;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=15:80662558-80662574;PctSeqSimilarity=0.9968;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1890.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:36:0|1:33:0:0:32:0|1:23:0:0:10:0/1:18:11:0/1:11:25:.:.:.
chr15	81204291	HG2_PB_SVrefine2Falcon1plusDovetail_3914	G	GGATTGCTGGGAAAGGCTGGGAGAGCTGGGAGAGGCTGGGAGAGCTGGGAGAGGCTGTGATTGCTGGGAGAGGCTGGGAGAGGCTGGGAGAGCTGGGAGAGGCTGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3914:HG3_PB_HySA_23496:HG3_PB_SVrefine2Falcon1Dovetail_9430:HG2_PB_pbsv_15578:HG3_PB_pbsv_15226:HG2_PB_assemblyticsfalcon_9097;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3914;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.161905;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=105;DistBack=55;DistForward=45;DistMin=45;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=240;REFWIDENED=15:81204236-81204475;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1891.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:37:./.:15:13:10:18:./.:1:0:3:6:./.:3:0:./.:.:.:.:.:.
chr15	81205870	HG4_Ill_scalpel_14296	A	AGAGGCTGGGAGAGCTGGGAGAGGCTGTGATTGCTGGGAGAGGCTGGGAGAGG	20	PASS	ClusterIDs=HG4_PB_pbsv_15480:HG4_Ill_svaba_19338:HG4_Ill_GATKHC_24698:HG4_Ill_GATKHCSBGrefine_10674:HG4_Ill_FB_13307:HG2_Ill_GATKHC_24811:HG2_Ill_GATKHCSBGrefine_10317:HG2_PB_HySA_28366:HG4_Ill_scalpel_14296:HG4_Ill_manta_3642:HG4_Ill_svaba_19339:HG2_Ill_svaba_19374:HG2_Ill_SpiralSDKrefine_5692:HG2_PB_pbsv_15579:HG4_Ill_Krunchall_21361:HG4_Ill_250bpfermikitraw_20356:HG4_Ill_150bpfermikitraw_19616:HG2_Ill_svaba_19373:HG2_Ill_Krunchall_21057:HG2_Ill_250bpfermikitraw_20699:HG2_Ill_150bpfermikitraw_19527;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19527:HG2_Ill_250bpfermikitraw_20699:HG2_Ill_Krunchall_21057:HG2_Ill_svaba_19373:HG4_Ill_150bpfermikitraw_19616:HG4_Ill_250bpfermikitraw_20356:HG4_Ill_Krunchall_21361:HG4_Ill_scalpel_14296:HG4_Ill_svaba_19338;NumExactMatchSVs=9;ClusterMaxShiftDist=0.280702;ClusterMaxSizeDiff=0.280702;ClusterMaxEditDist=0.350877;PBcalls=3;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=1465;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=15:81205869-81205871;PctSeqSimilarity=0.9298;PctSizeSimilarity=0.8667;PctRecOverlap=0.8689;SizeDiff=-8;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=88;MatchId=1892.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:./.:11:18:20:8:1|0:0:29:17:0:0/1:30:24:./.:.:.:.:.:.
chr15	81392585	HG2_PB_SVrefine2Falcon1plusDovetail_3915	T	TAATACTTATTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3672:HG2_PB_pbsv_15581:HG3_PB_pbsv_15228:HG4_PB_pbsv_15482:HG4_PB_HySA_22660:HG2_PB_assemblyticsfalcon_9098:HG4_PB_SVrefine2PBcRDovetail_7734:HG4_Ill_GATKHCSBGrefine_10675:HG2_Ill_MetaSV_1689:HG4_Ill_MetaSV_1743:HG3_PB_SVrefine2PBcRDovetail_7334:HG4_PB_SVrefine2Falcon1Dovetail_9487:HG3_PB_SVrefine2Falcon1Dovetail_9431:HG3_Ill_MetaSV_1799:HG2_PB_SVrefine2Falcon1plusDovetail_3915:HG2_PB_HySA_28369:HG3_PB_HySA_23497:HG2_Ill_breakscan11_4643:HG2_PB_assemblyticsPBcR_8808;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3915:HG3_Ill_MetaSV_1799:HG3_PB_SVrefine2Falcon1Dovetail_9431:HG4_PB_SVrefine2Falcon1Dovetail_9487;NumExactMatchSVs=4;ClusterMaxShiftDist=0.141479;ClusterMaxSizeDiff=0.135048;ClusterMaxEditDist=0.199697;PBcalls=14;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=315;DistBack=-3;DistForward=0;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=15:81392586-81392597;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9937;PctRecOverlap=0.9937;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1893.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:73:./.:14:18:6:26:1|0:0:7:18:0:0/1:22:6:0/1:6:28:.:.:.
chr15	84363980	HG3_Ill_SVrefine2DISCOVARDovetail_11195	A	ATGTGTGGTATATGTGTGTGTATGTGTGGTGTGTGGTGTGTATGGATGGTGTGTGTGGGGTATGTTAGGTGTGTGTGTGTGTATGTAGTGTGTGGTATGTGGTGTGTGTGCATTGTATGTGTTAGGTGTGTAGTGTGTGGTGTGTGAGTACATTCAGTGTTTGGTGTATGTGTGGTATATTTGTGGTGTGTGTGTATATATAGTGCGTGGTGTGTGTGGGGGTATGTTTGTGGTGTGTGTGTATATGTGTAATGTGTGGTATGTGATTGTGTATGTGCATGTGTGTGTGGTATGTGGTGTATGTGTGTAGTGTGTTATATGTGTTTGTGTATGTGTGTTGTCTGTGTATGGTATGTTTGTGGTATGTATATGTGTAATGTGTGGTTATGTGTTTGTGTATGTGTGTGTATGTGGTATGTATTTTTTCTGTGTGTGTGGTATGCGTGCAGTGTC	20	PASS	ClusterIDs=HG3_PB_pbsv_15238:HG3_PB_SVrefine2Falcon1Dovetail_9438:HG4_PB_pbsv_15488:HG2_PB_SVrefine2Falcon1plusDovetail_3923:HG3_PB_assemblyticsfalcon_9079:HG2_PB_PB10Xdip_10894:HG2_PB_PB10Xdip_10893:HG4_PB_HySA_22679:HG4_PB_SVrefine2PBcRDovetail_7737:HG4_Ill_SVrefine2DISCOVARDovetail_11010:HG4_Ill_MetaSV_1747:HG4_Ill_GATKHCSBGrefine_10681:HG3_PB_SVrefine2PBcRDovetail_7339:HG3_Ill_SVrefine2DISCOVARDovetail_11195:HG3_Ill_MetaSV_1802:HG3_Ill_GATKHCSBGrefine_10234:HG2_PB_SVrefine2PB10Xhap12_11268:HG2_Ill_SVrefine2DISCOVARplusDovetail_4372:HG2_Ill_MetaSV_1694:HG2_Ill_GATKHCSBGrefine_10327:HG2_PB_pbsv_15590;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10327:HG2_Ill_MetaSV_1694:HG2_Ill_SVrefine2DISCOVARplusDovetail_4372:HG2_PB_SVrefine2PB10Xhap12_11268:HG3_Ill_GATKHCSBGrefine_10234:HG3_Ill_MetaSV_1802:HG3_Ill_SVrefine2DISCOVARDovetail_11195:HG3_PB_SVrefine2PBcRDovetail_7339:HG4_Ill_GATKHCSBGrefine_10681:HG4_Ill_MetaSV_1747:HG4_Ill_SVrefine2DISCOVARDovetail_11010:HG4_PB_SVrefine2PBcRDovetail_7737;NumExactMatchSVs=12;ClusterMaxShiftDist=0.219239;ClusterMaxSizeDiff=0.219239;ClusterMaxEditDist=0.295302;PBcalls=12;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=452;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=37;REFWIDENED=15:84363981-84364017;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1895.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:16:1:24:1/1:3:103:2:99:1/1:0:20:1/1:2:139:.:.:.
chr15	85150923	HG4_PB_pbsv_15491	A	ATTTTTTTTTTTTTATTTTTTTTTTTTATTTTTTTAAATTTAATTTTTTTATTGATAATTCTTGGAGTTGTTTTCTCACAGAGGGGGATTTGGCAGGGTGCATGGGACATAGTGGAGGGAAGGTCAGCAAGATAAACAAGTGAACAAAGTCCTCTGGTTTTCCTAGGCAGAGACGCCTGCGGCCTTCTGCAGTGTTTGTGTCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGGAGCATGCGCCTTCCAAGGCATGCTGTTTTACCAAAGCACATCTTGCACGCGCCCTTAAATCCTTTACCCTGATGGACACAGCAACATGTTTCATCAAGAGAGCACAGGGTTGGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAAATGAAAAAGTCTGCCCAGTCTACTTCTTTCTACCGACACGGCAAACCATCCGATTTCTCAATCTTTTCCCGCACCTTTCCGCCTTTCTATTGCCACAAAGCCGCCACTGTCATCCTGGGCGTTCTCAATGAGCCGCTGGGCACATCCTCCCAGATACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCAACTTTCCCAGTAGGGGCGGCAGGGGCAGAGGCGCCCTCACCTCCCGGACGGGGCGGCTGGGCGGGCAGGGGGGCTGACCCCACCCACCCTTCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACGCCCCCAACCTCCCTCCCAGGATTCGGGGCGGCTGGCCGGGCGGGGGGCCTTGACGCCCCACATCCCTCCCGGACGGGCGGCTGGCCGTGCAGAGGGGCTCCCTCACTTCCGCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACTCCGGACGGGGGGTGGCCGGGCAGGGGGCCGACCCCCCCAACCTATGTCCCTCCGGAACAGGGGCGGCTGGCCGGGCGGGGTGAACCCCCACCTCCCTCCTGGAGCGGGGGCGGCTGGCCGGCGGGGGGCCAGACCCCCCCACCTCCCTTCCGGACAGGGGCGGCTGGGCCGGCGCAGAGGGGGCTCCTCACTCCCAGTAGGGGCGGCCGGGCAGAGGGCGCCCCTCCACTCCGGACAGGGCGGTGGCTGGGCGGGGGGGCTGACCCCGCCCCCACTCCCTCCGGACGGGGCGGCTGCCGGGCGGGGGGCTGACCCCCCCACCTCGCCTCCCGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCACAGTAGGGGCGGCCGGGCAGAGGCGCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCCGACGCCCCCACCTCCTCCCGGACGGGGCGGCTTGGCCGGCGCGGGGGGCCGACCCCCACCTCCCTCCCGGACGGGGGCGGCTTGCCGGGCAGAGGGGCTCCTCACTTCCCAGTGAGTGGCGGCTTGGTCAGAGGCTGTCCCTCAACCTCCCAGACGGGCGGATGGCGGGCGGAGGGCTGACCCCCCCCACCTCCCTCCCGGACGCGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCTACCTCCCTCCGGACGGGGCGGCTGGCCGGGGGTGGGGGGCTGACCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCCGGGCTGAGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCCGAAAGGCGCCCCTTCACCTCCGGAGGGGTGGGCTGGCCGGTGCGGGGGGCTGGACGCCCCACCTCCCTCCAGACTGGCACGGCTGGCCAGGCGGGGGTGACCCCCCACCTCCCTCCACCGGATGGCAGCGGCTGGCCGGGCGGGGGGGCTGACCCCACCACCTCCCTCCCGGAATGGGGCGGCTTGGCCGGGCGGGGGGCGACGCCCCCCCAACCTCCCTCGCCGGACGGGGTGGCTGCCGGGCGGAGAAACGGCTCCTTCACGTTCCAGATGGGGTGGCTTGCCGGGCGGGAGAGGCTCTACTTCTCAGACGGGGCAAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGAGCGGGGCGGCTGGAAGAGACGCTCCGTCACCTCCCAGACGGGGTCTCGCCGGGCAGATGGCGCTCTCACATCCAGATGGGGTCGGCGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGTCGGCCGGGGCAGAGACACTCCTCACTTTTCCTAGAAGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGAGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGCAGCCAGGCAGAGGGGCTCCTTCACATCCAGACAATGGGCGGCCAGGCAGAGACACTCCTCAACTTCCGCAGAGGGTGGCAGCCGGCAGAGGCTGCAATCTCGGCACTATTGGAGGCCAAGGCAGGCGGCTGCCTCCTTGCCCTCGGGCCCGCGGGGCCCGTCGCTCCTCCCAGTCCGCTGCCTCGGCGGCCAATTTTTGTATTTAGT	10	PASS	ClusterIDs=HG4_PB_HySA_22685:HG2_PB_HySA_28393:HG2_PB_PB10Xdip_11093:HG4_PB_pbsv_15491:HG2_PB_pbsv_15593:HG4_PB_SVrefine2Falcon1Dovetail_9495:HG2_PB_assemblyticsPBcR_8833:HG2_PB_SVrefine2PB10Xhap12_11271:HG2_PB_SVrefine2Falcon1plusDovetail_3925:HG2_PB_SVrefine2PBcRplusDovetail_3681;NumClusterSVs=10;ExactMatchIDs=HG4_PB_pbsv_15491;NumExactMatchSVs=1;ClusterMaxShiftDist=0.174046;ClusterMaxSizeDiff=0.171429;ClusterMaxEditDist=0.242782;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=2475;DistBack=0;DistForward=54148;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:85150924-85150923;PctSeqSimilarity=0.9574;PctSizeSimilarity=0.9867;PctRecOverlap=0.9859;SizeDiff=33;StartDistance=19;EndDistance=19;GTMatch=0;TruScore=97;MatchId=1897.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:37:./.:0:2:0:1:./.:10:0:1:1:0/1:12:10:0/1:74:51:.:2469:.
chr15	86355614	HG3_PB_SVrefine2PBcRDovetail_7344	T	TGTGTATATGCGTGTATATATACACATACGTGTATATGCGTGTATATATACACATGCGTGTATATATACACATACGTGTATATGCGTGTATATATACACATACGTGTATATGCGTGTATATATACACATACGTGTATATGCGTGTATATATACACATACGTGTATATGCGTGTATATATACACATACGTGTATATGCGTGTATATATACACATACGTGTATATGCGTGTATATATACACATACGTGTATATGCGTGTATATATACACATACGTGTATATGCGTGTATATATACACATAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7344:HG3_PB_SVrefine2Falcon1Dovetail_9441:HG2_PB_pbsv_15598:HG3_PB_pbsv_15246:HG3_Ill_SVrefine2DISCOVARDovetail_11200:HG2_PB_SVrefine2Falcon2Bionano_7719;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_7344;NumExactMatchSVs=1;ClusterMaxShiftDist=0.246334;ClusterMaxSizeDiff=0.246334;ClusterMaxEditDist=0.246334;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=298;DistBack=15798;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=138;REFWIDENED=15:86355615-86355752;PctSeqSimilarity=0.9144;PctSizeSimilarity=0.8418;PctRecOverlap=0.8423;SizeDiff=-56;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=86;MatchId=1899.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:41:0|1:26:0:1:34:./.:1:14:9:0:0/1:29:6:./.:.:.:.:.:.
chr15	86535701	HG2_PB_SVrefine2PB10Xhap12_11277	A	ATTCCTCCCTCCTTCCTTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTTTCTCCTTCCCCCTTCCCTTCCCCCTTCCCTTCCTCCTTCCCTTCCCCTTCCCTTCCTCCTTCCCTTCTTCCTTGCCTTCTTCCTTCCTCCCTCCCTTCCTTCCTCCCTCCCTTCCTTCCTCCTTCCCTTCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10797:HG2_PB_SVrefine2Falcon1plusDovetail_3928:HG2_PB_SVrefine2Falcon1plusDovetail_3929:HG2_PB_SVrefine2PB10Xhap12_11278:HG4_PB_HySA_22707:HG3_PB_pbsv_15250:HG2_PB_PB10Xdip_11100:HG2_PB_PB10Xdip_11099:HG2_PB_HySA_28408:HG2_PB_pbsv_15602:HG4_PB_SVrefine2Falcon1Dovetail_9502:HG3_PB_SVrefine2Falcon1Dovetail_9444:HG4_PB_pbsv_15502:HG4_PB_SVrefine2PBcRDovetail_7744:HG3_PB_SVrefine2PBcRDovetail_7346:HG2_PB_SVrefine2PBcRplusDovetail_3685:HG2_PB_SVrefine2PB10Xhap12_11277:HG2_PB_SVrefine2Falcon2Bionano_7721;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10797:HG2_PB_SVrefine2PBcRplusDovetail_3685:HG2_PB_SVrefine2PB10Xhap12_11277:HG2_PB_SVrefine2Falcon2Bionano_7721;NumExactMatchSVs=4;ClusterMaxShiftDist=0.12381;ClusterMaxSizeDiff=0.12381;ClusterMaxEditDist=0.317757;PBcalls=17;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=221;DistBack=12266;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=175;REFWIDENED=15:86535702-86535876;PctSeqSimilarity=0.9838;PctSizeSimilarity=1;PctRecOverlap=0.7466;SizeDiff=0;StartDistance=-56;EndDistance=-56;GTMatch=0;TruScore=91;MatchId=1901.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:1:25:1:13:./.:0:11:2:4:1/1:0:10:./.:.:.:.:.:.
chr15	86556566	HG4_PB_pbsv_15503	G	GATTTTGCGCTGCAGCAATAATCTAGTTTGGCGACTGTGCTATCGTAAGTCTTATCAGGAGCAGATAGGGACCCCTTGAGCTTGCATGGTTAGGAAGGTGGAGTGATGGGAGAGTGTGAATCCTGCCCGGCTTAGTAAGTAGGCACTGATTCTTATATTATCTTTTAGGTTGACAGACCATCCCACATATGTTTTGCCCTCTTGATAGTCTGAAGACAAAAAAACCAAACATTTTTTTCTCTATCTCTATTGAAAAGGACGCATAGCGCTAAGACACTGTGGGAAGATGACACTTCCATGCCTCTCCTGAGAGCATCACGCTTCCAGGACGCTCTGGCAGTCCAGCATATCATGGAAGCATTCTCACCAGTGACTGTCCATTTGGTTTTTATGAGGCTTTCTCTTATGTTAGACATTGTTTTAAATGATGATTGGTTGCCTTCACTGATTCAACTCAACATTCACGCCCCTCTCATCTCTCCTCTCACCACTCCTCTCCCGTCCCACCTCCCCCCCCTCTCCCCACTGCTCCTCTCTCTCCCCCTCTCTTCCTCTCCTCTTCTCTCCCCACCTGCTCTCTTCTCTCCCTCTCCCCTTCTGTCTTGCTCCGCCCCGGTTTCCCCTCTCTCTGCTCCGCTCCCTCCAACCCCGTTCCCTCTCCCGTCCCCTCCTTGTCTCTCTCCACCTTTCTCTCTCCCTCCCTCTCCTCCCTCCCCTCCGCCCATCTCTCCCTCCTCCCCCTCCCCCTCTCTTCCCCAATCTCGTCCCTCCTCCCCTCCCCCCTCCTCCCTTACCCTCTCCCTCTACCCCCTCTCTCCCCTGCCTCTCCTCCTCCGCTACCCTGCTCTCCGTCGTCTCCTCCCTCCCCTCCTCTTCCATCTCTTCTCCTCCCCTCTCTTAATTCCATCCCCCCCCCCCCTCGTCTTCCCCTCCTCTCCCTCCCCCCCCTCTCTTCCCTCCCTCTCTCTCCCCTCCCCTCCCCCTCCTCCACCTCTCTCTCCCTCCCCCCTCTCCCCCCCGCTGTCTGTCTCCCCTCCCCCCTTCGCCGCTCTCCCTCCCTCTCTCCCCTCCCCCCTCCCCCTCCCTCTCTCCCCTCACCCTCTCTCTCTCCCCCTCCCCTTTCTTCTTTCGCCCCTCTCCCTTCCTGTCCTTTCCCTGCTCGCCTGTCTGCTTCCCCTCCCGCCTCCCTAATTCGCCCTCCTCTCTTCCCCCTCCCTCTCCCCGTCTCGTTCCCACCTCCTCTCTTCCCCTCCCTCTCCTCTCTTCCCCCTCCTCTCTCTCTCTTTCCCCTCCCTCTCTTTCCCTCCCTCTCCCTCTCTTCCCCTCCCTCTCTCCCCATCTTCCGCTCCCTCTTCCTCTCTTCGCCCTCCCTCTCTTCCCCCTCCTCTTCTCTCTCCCCTCCTCATTCTCTCTCTGCCCCGCTACCCTCTCGCTCTCTTCCGCCATGCCCTCCCTCTTTCATGCCTCCACTCCCTCTCTCTCTCTACTCCTGTCTCTGTCTTCTCCCTCTGTCTCTCTCTTCCCCACCTCTCCCCACCTCCCCCCAGAATGTTGGTATGGTGAACTCTCCACTACTATTCAAGC	20	PASS	ClusterIDs=HG3_PB_HySA_23538:HG2_PB_pbsv_15603:HG3_PB_pbsv_15251:HG2_PB_PB10Xdip_11101:HG4_PB_pbsv_15503:HG2_Ill_breakscan11_4645:HG2_PB_HySA_28412:HG4_PB_SVrefine2PBcRDovetail_7745:HG4_PB_assemblyticsfalcon_8975:HG2_PB_SVrefine2Falcon2Bionano_7722:HG2_PB_SVrefine2PB10Xhap12_11279:HG2_PB_SVrefine2PBcRplusDovetail_3686:HG3_PB_SVrefine2PBcRDovetail_7347:HG2_PB_SVrefine2Falcon1plusDovetail_3930:HG4_PB_SVrefine2Falcon1Dovetail_9503:HG3_PB_SVrefine2Falcon1Dovetail_9445;NumClusterSVs=16;ExactMatchIDs=HG4_PB_pbsv_15503;NumExactMatchSVs=1;ClusterMaxShiftDist=0.198605;ClusterMaxSizeDiff=0.198605;ClusterMaxEditDist=0.321632;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1583;DistBack=-67;DistForward=73390;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=93;REFWIDENED=15:86556528-86556620;PctSeqSimilarity=0.9152;PctSizeSimilarity=0.9823;PctRecOverlap=0.9823;SizeDiff=28;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=95;MatchId=1902.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:1:15:0:6:./.:27:9:15:6:0/1:14:7:0/1:22:72:.:1595:.
chr15	86841494	HG2_Ill_250bpfermikitraw_20726	A	ATATATATATATATGGTAACTATATATATATATATATATATGGTAACTATATATATATATATATATATATGGTAACTATATATATATATATATGGTAACTATATATATATATATATGGTAAC	20	PASS	ClusterIDs=HG3_PB_pbsv_15252:HG2_PB_HySA_28415:HG3_Ill_SVrefine2DISCOVARDovetail_11203:HG3_PB_assemblyticsfalcon_9102:HG4_PB_assemblyticsfalcon_8977:HG4_PB_pbsv_15504:HG3_PB_SVrefine2Falcon1Dovetail_9446:HG2_PB_SVrefine2Falcon1plusDovetail_3931:HG4_PB_SVrefine2PBcRDovetail_7746:HG4_PB_SVrefine2Falcon1Dovetail_9504:HG4_Ill_SVrefine2DISCOVARDovetail_11017:HG2_PB_SVrefine2PBcRplusDovetail_3687:HG2_PB_SVrefine2PB10Xhap12_11280:HG2_PB_SVrefine2Falcon2Bionano_7723:HG2_Ill_SVrefine2DISCOVARplusDovetail_4381:HG2_Ill_250bpfermikitraw_20726:HG2_PB_pbsv_15604:HG2_Ill_manta_4285:HG4_Ill_GATKHCSBGrefine_10690:HG3_Ill_GATKHCSBGrefine_10242:HG2_Ill_GATKHCSBGrefine_10334:HG2_PB_PB10Xdip_11102;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20726:HG2_Ill_SVrefine2DISCOVARplusDovetail_4381:HG2_PB_SVrefine2Falcon2Bionano_7723:HG2_PB_SVrefine2PB10Xhap12_11280:HG2_PB_SVrefine2PBcRplusDovetail_3687:HG4_Ill_SVrefine2DISCOVARDovetail_11017:HG4_PB_SVrefine2Falcon1Dovetail_9504:HG4_PB_SVrefine2PBcRDovetail_7746;NumExactMatchSVs=8;ClusterMaxShiftDist=0.364444;ClusterMaxSizeDiff=0.364444;ClusterMaxEditDist=0.365297;PBcalls=14;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=121;DistBack=3;DistForward=11;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=98;REFWIDENED=15:86841489-86841586;PctSeqSimilarity=0.9797;PctSizeSimilarity=0.9528;PctRecOverlap=0.7953;SizeDiff=-6;StartDistance=-23;EndDistance=-23;GTMatch=0;TruScore=90;MatchId=1903.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:2:19:1:18:./.:1:22:2:18:1/1:0:17:./.:.:.:.:.:.
chr15	87578045	HG3_Ill_250bpfermikitraw_20133	C	CATGTATACATACATATATACATGTATACATACATATATGTATACATACATATATACATGTATACATACATAT	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_20735:HG3_Ill_GATKHC_24715:HG3_Ill_250bpfermikitraw_20133:HG3_Ill_150bpfermikitraw_19590:HG2_Ill_GATKHC_24867:HG2_Ill_GATKHCSBGrefine_10338;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20735:HG3_Ill_GATKHC_24715:HG3_Ill_250bpfermikitraw_20133:HG3_Ill_150bpfermikitraw_19590:HG2_Ill_GATKHC_24867:HG2_Ill_GATKHCSBGrefine_10338;NumExactMatchSVs=6;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=72;DistBack=11;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=15:87578044-87578112;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1904.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:46:./.:4:27:22:16:./.:1:24:6:4:0/1:6:31:./.:.:.:.:.:.
chr15	89440745	HG3_Ill_250bpfermikitraw_20144	T	TGGCCCCACCTCCTGCTGCTCAGAGGCGGCCCCACCTCCTGCTGCTCAGAGGC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_20743:HG3_PB_HySA_23551:HG3_PB_SVrefine2PBcRDovetail_7349:HG3_Ill_SVrefine2DISCOVARDovetail_11213:HG3_Ill_Krunchall_20692:HG3_Ill_GATKHC_24727:HG3_Ill_GATKHCSBGrefine_10247:HG3_Ill_250bpfermikitraw_20144:HG3_Ill_150bpfermikitraw_19602:HG2_PB_SVrefine2Falcon2Bionano_7728:HG2_Ill_Krunchall_21098:HG2_Ill_GATKHC_24880;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20743:HG3_PB_SVrefine2PBcRDovetail_7349:HG3_Ill_SVrefine2DISCOVARDovetail_11213:HG3_Ill_Krunchall_20692:HG3_Ill_GATKHC_24727:HG3_Ill_GATKHCSBGrefine_10247:HG3_Ill_250bpfermikitraw_20144:HG3_Ill_150bpfermikitraw_19602:HG2_PB_SVrefine2Falcon2Bionano_7728:HG2_Ill_Krunchall_21098:HG2_Ill_GATKHC_24880;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0754717;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=-1;DistForward=4;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=75;REFWIDENED=15:89440746-89440820;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1905.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:32:0|1:22:4:1:26:1|0:0:12:6:0:0/1:19:17:./.:.:.:.:.:.
chr15	89857297	HG3_Ill_GATKHC_24734	C	CACACACACACAAATGTAGGACCTACAAATTACAATTCACGTTAGGGGGAAAGACACACATAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_19582:HG3_PB_pbsv_15264:HG3_PB_HySA_23557:HG2_PB_PB10Xdip_11111:HG2_PB_PB10Xdip_11110:HG3_Ill_scalpel_14994:HG2_PB_pbsv_15615:HG3_Ill_GATKHC_24734:HG3_Ill_GATKHCSBGrefine_10248:HG3_Ill_150bpfermikitraw_19611:HG2_Ill_scalpel_14730:HG2_Ill_GATKHC_24888:HG2_Ill_GATKHCSBGrefine_10341:HG2_Ill_250bpfermikitraw_20751;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19582:HG3_Ill_scalpel_14994:HG3_Ill_GATKHC_24734:HG3_Ill_GATKHCSBGrefine_10248:HG3_Ill_150bpfermikitraw_19611:HG2_Ill_scalpel_14730:HG2_Ill_GATKHC_24888:HG2_Ill_GATKHCSBGrefine_10341:HG2_Ill_250bpfermikitraw_20751;NumExactMatchSVs=9;ClusterMaxShiftDist=0.144;ClusterMaxSizeDiff=0.144;ClusterMaxEditDist=0.300752;PBcalls=5;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=143985;DistForward=51;DistMin=51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=45;REFWIDENED=15:89857296-89857343;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1906.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:26:0|1:23:1:3:22:1|0:1:27:14:0:0/1:12:11:./.:.:.:.:.:.
chr15	89885611	HG2_PB_SVrefine2PB10Xhap12_11286	A	ATTTATTTTTTTTGAGACAGAGTCTTGCCCTTTTGCCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTACCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCATCACGTCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACAATGCCCAGCTGCTTTTGCTTTTTTAAAAGACAGAGCTTCTCTCTGTCACCCAGGCTGGAGTACAGCAGTGCCTCCCAAGCAGCTGGGATTGCAGGTGTGCATCACCATGCCCAGATAAATTATTTTATTTTATTTTTTTAGAGATGCGAGTCTTGCTGTGTTGTTCAGGCTGATCTCGAACTCCTGGCCACAAGTGATCCTGCCTCCTCAGCCTCCAAGGAGCTAGGATTACAAGCATGAGCCACCGCCCCCGGCTCATTCTGGTTATTTCAAGCAAGAAGAGATGTAATGCAGGGCTTGACCTACATGAATCAAGACAATTAGAAGTGCCAGAGGGGTGGACATCAGAGAGAGACTTGCTTCAAGGTTACACCATCACAGCTGTGATCTAGATCCAAAATCTGAAGGAAAGAAGGCCACTGTTGCTACAGCTACTGTTGCTGCCACCACACATGAAACCAGCGACTGGAGAGTGACACCTGGAGTTGGGCAGCCCCAAAGAGTCTTGTCAGCCAGAGCTTCCTGGTCTGTGCCAAGGCTACATGAGTGTTCACAGGCGGAATATAAGTCACAACCAGACCCCCAGCTGCAAGGGCATCTGGGAAAAGTAGTTCTTCGCCTTCTACCACCTGTAATTCCTGGGGGAACACAGGAGAGGGTGGGAATGGGGGCCAAGTTCCAATAGACAATATCTAGCAGGCAAGGCTGTACTATTTTATCTGTACCTCTGCCATGACATGTATCATCTCTACCTGGCCTAGGGACTGGGAATACACACACTGGTTCCCCACACTGGGAGCAGGGGCTGTTTCTTCATCACCTCGGGCCCTCCTGTGCCCAGCACAGTCTATCAGAGAACAAGTGCTCCATTGGTGTTTCTGGCTGAGTTGCTCATGTTTTCTGTTTTCCACAGGGATGGGGATTTAGGTGAGGAGCTGCCTGATTACCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11286:HG3_PB_pbsv_15266:HG2_PB_pbsv_15617:HG2_PB_HySA_28447:HG4_PB_pbsv_15518:HG2_PB_PB10Xdip_11118:HG2_PB_PB10Xdip_11117:HG4_Ill_MetaSV_1754:HG2_Ill_MetaSV_1697:HG4_Ill_GATKHCSBGrefine_10699:HG3_Ill_MetaSV_1806:HG2_PB_SVrefine2Falcon1plusDovetail_3938:HG3_Ill_SVrefine2DISCOVARDovetail_11217:HG3_PB_SVrefine2Falcon1Dovetail_9454:HG4_PB_SVrefine2Falcon1Dovetail_9513:HG4_PB_SVrefine2PBcRDovetail_7752:HG2_PB_SVrefine2Falcon2Bionano_7730:HG4_Ill_SVrefine2DISCOVARDovetail_11024:HG2_Ill_SVrefine2DISCOVARplusDovetail_4388:HG2_10X_SVrefine210Xhap12_10804:HG3_PB_SVrefine2PBcRDovetail_7351:HG2_PB_SVrefine2PBcRplusDovetail_3692;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11286:HG3_PB_SVrefine2PBcRDovetail_7351:HG2_PB_SVrefine2PBcRplusDovetail_3692;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0456873;ClusterMaxSizeDiff=0.0435989;ClusterMaxEditDist=0.225286;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=1236;DistBack=17072;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=284;REFWIDENED=15:89885612-89885895;PctSeqSimilarity=0.989;PctSizeSimilarity=0.9992;PctRecOverlap=0.8238;SizeDiff=1;StartDistance=-217;EndDistance=-217;GTMatch=0;TruScore=93;MatchId=1907.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:122:1/1:0:32:0:33:./.:0:2:0:4:1/1:0:18:./.:17:156:.:2755:.
chr15	90312927	HG2_10X_SVrefine210Xhap12_10809	T	TTTTTTTTGAGACAGGGTCTCATTCTGTCGCCCAGGCTAGATCATAGTGGCATGATCATAGTTCACGGCAGCCTCAACCTCTTGGGCTCAAGCAATCCTCTCGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCATGTGACACCATTGCCCATCTTTTTGTTTCATTGTTTTTGTAGAGACATAGGTCTCCCTATGTTCCCCAGGCTGGTCTTGAAATCTTGGGCTCAAGCGATCTTCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATAAGCCACGGCACCTGGCCTATTTTTCTTTCACATTAAAGAAATTCAGGGGTGGACAGTCCAGGGCCAGTGTGGCATGTCCACGTTCTCATCAATGCCGCAGGCTTCTCTCTGCTCTACCATCCTTAATGTGTGATTTCTGTCTTTGAGACTGCTTCAGAGTCACAGTGGAGTTGCTGAAACTCCAGCCATCATATGTTTTCCAGGTAATGAAGAAAATATAAGGGGGCAGAGCCACAGGAGTGTATTTCCCAGTGCTAAAGAAGCTCCAGCCAGTGAATTCCACTGATATCTCATTGGCCATTCCATCTATAAAAGAAGCTGGCAAATGTAGGG	20	PASS	ClusterIDs=HG2_Ill_Spiral_1031:HG2_PB_pbsv_15619:HG3_PB_assemblyticsfalcon_9137:HG2_PB_HySA_28455:HG2_PB_SVrefine2Falcon1plusDovetail_3939:HG3_Ill_MetaSV_1807:HG2_Ill_MetaSV_1698:HG4_PB_HySA_22730:HG3_PB_SVrefine2Falcon1Dovetail_9456:HG3_Ill_SVrefine2DISCOVARDovetail_11219:HG2_PB_SVrefine2PBcRplusDovetail_3693:HG2_PB_SVrefine2PB10Xhap12_11287:HG2_PB_SVrefine2Falcon2Bionano_7731:HG2_Ill_SVrefine2DISCOVARplusDovetail_4391:HG2_10X_SVrefine210Xhap12_10809:HG4_PB_SVrefine2Falcon1Dovetail_9514:HG4_PB_pbsv_15523:HG4_PB_SVrefine2PBcRDovetail_7753:HG4_Ill_GATKHCSBGrefine_10701:HG3_Ill_GATKHCSBGrefine_10250:HG2_Ill_GATKHCSBGrefine_10345:HG2_PB_PB10Xdip_11120:HG2_PB_PB10Xdip_11119:HG3_PB_HySA_23571:HG3_PB_pbsv_15269:HG4_Ill_Spiral_1217;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10809:HG2_Ill_SVrefine2DISCOVARplusDovetail_4391:HG2_PB_SVrefine2Falcon2Bionano_7731:HG2_PB_SVrefine2PB10Xhap12_11287:HG2_PB_SVrefine2PBcRplusDovetail_3693:HG3_Ill_SVrefine2DISCOVARDovetail_11219:HG3_PB_SVrefine2Falcon1Dovetail_9456;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0566802;ClusterMaxSizeDiff=0.0566802;ClusterMaxEditDist=0.158833;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=609;DistBack=905;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=15:90312928-90312934;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9984;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1908.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:82:1/1:0:13:0:21:1/1:0:9:0:14:1/1:0:15:./.:5:68:.:.:.
chr15	91095054	HG2_Ill_SVrefine2DISCOVARplusDovetail_4394	C	CCAAAATCAGATCTCCGCTTGGTAGAATTTCTCACTGTAAAATGTGGCGGTTCCTCCGAAAGGCTGTGTGGTAGGCGCGCGCTTACATGACACACACACACAGATTAGGTAGTCTTCTAAAGGAACAGACTGACCCTGCCTTTCAAAAGACGATGCCCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3941:HG2_PB_pbsv_15621:HG2_PB_HySA_28462:HG3_PB_SVrefine2PBcRDovetail_7354:HG3_Ill_SVrefine2DISCOVARDovetail_11224:HG3_Ill_GATKHCSBGrefine_10252:HG3_Ill_250bpfermikitraw_20165:HG3_Ill_150bpfermikitraw_19629:HG2_Ill_SVrefine2DISCOVARplusDovetail_4394:HG2_Ill_GATKHCSBGrefine_10348:HG2_10X_SVrefine210Xhap12_10811;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10811:HG2_Ill_GATKHCSBGrefine_10348:HG2_Ill_SVrefine2DISCOVARplusDovetail_4394:HG3_Ill_150bpfermikitraw_19629:HG3_Ill_250bpfermikitraw_20165:HG3_Ill_GATKHCSBGrefine_10252:HG3_Ill_SVrefine2DISCOVARDovetail_11224:HG3_PB_SVrefine2PBcRDovetail_7354;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0996885;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.137072;PBcalls=4;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=158;DistBack=18697;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=111;REFWIDENED=15:91095036-91095146;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1909.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:43:0|1:27:1:0:40:1|0:2:32:14:0:0/1:17:16:./.:.:.:.:.:.
chr15	91198676	HG2_PB_SVrefine2PBcRplusDovetail_3696	C	CTCTACTAAAAATACAAAAATTAGCCAGTGTGGTGGTAGGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTAGAACCTGGTAGGTGGAGTTTGCAGTGAGCCGAGATCATACCACTGCACTCCAGCCTGGGCAGCAGAGCAAGACTCTGTCTCCAAAAAAAAAAAGACTTTGAAAGGACCCAAAAAGGTGAGGGAAAGGGGGAAAGGAAGGGACCAAAGCCGAGAGACAGCCCCAGAACAGGATGAGTGGGCATCACAGAGCTTCCGGCACCGAGGAAGACCAAGTGGGTCCAGGCTCAGGGAAGCCTGAGAGATGCCTTTGACCAATCCATGAATAATGTTATTACAGCCATTGATTATTCACATTACTATAAATAAGTGAGTGGCCAAGAAATCACACCCGAGGAGATGCGAATGCTACCCGGACAGGGGCTGTCACCTGTAACGAGCACCCCTTGGCGTTCCCTCGCTTCCTTGCAGTAGCCGCTACGGGGCATCCAGTCCACCGCGTGCTGCTGACCAGCAGACTCTGGGCAGGAAGTGGTTTCTTTTTTTAATTCAAAAATATCTGCCTTGTCTTGTTTGCATGAATGAGAGTGTGGCTCATAAATGTGAGCTTGTTAAAAAGTCCGATGCCTGGTACAATGATCATTATTTGCAGATGACATGATTCTAGACCTGAAAGTTTGGAGAAGATCAAATTTAAAACCAAAAGAAACAAGAAGAGAAATTAGTGTATGACTTAGAATTTAACACTGGGAGGCCAAGAATAATCTCAGCACTTTAGGAGGCTGAGGTGGATGGATTGCTTGAGTCCAGGAGCTGGAAACCTGGACAATATAGCAAGGCCCTATG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9461:HG3_PB_pbsv_15276:HG4_PB_pbsv_15527:HG2_PB_HySA_28470:HG2_PB_PB10Xdip_11143:HG2_PB_PB10Xdip_11142:HG4_Ill_MetaSV_1755:HG4_Ill_GATKHCSBGrefine_10704:HG4_PB_HySA_22743:HG2_PB_pbsv_15624:HG2_Ill_breakscan11_4646:HG2_PB_HySA_28469:HG2_Ill_MetaSV_1701:HG3_Ill_GATKHCSBGrefine_10255:HG3_Ill_MetaSV_1811:HG3_PB_HySA_23580:HG4_PB_SVrefine2Falcon1Dovetail_9518:HG4_PB_SVrefine2PBcRDovetail_7757:HG4_Ill_SVrefine2DISCOVARDovetail_11032:HG2_PB_SVrefine2PBcRplusDovetail_3696:HG2_PB_SVrefine2PB10Xhap12_11294:HG2_PB_SVrefine2Falcon1plusDovetail_3945:HG3_PB_SVrefine2PBcRDovetail_7358:HG3_Ill_SVrefine2DISCOVARDovetail_11227:HG2_PB_SVrefine2Falcon2Bionano_7733:HG2_Ill_SVrefine2DISCOVARplusDovetail_4397:HG2_10X_SVrefine210Xhap12_10815;NumClusterSVs=27;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3945:HG2_PB_SVrefine2PB10Xhap12_11294:HG2_PB_SVrefine2PBcRplusDovetail_3696:HG4_Ill_SVrefine2DISCOVARDovetail_11032:HG4_PB_SVrefine2PBcRDovetail_7757;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0462754;ClusterMaxSizeDiff=0.0451467;ClusterMaxEditDist=0.18677;PBcalls=17;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=869;DistBack=7942;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=178;REFWIDENED=15:91198677-91198854;PctSeqSimilarity=0.9872;PctSizeSimilarity=0.9989;PctRecOverlap=0.8301;SizeDiff=-1;StartDistance=-147;EndDistance=-147;GTMatch=0;TruScore=93;MatchId=1910.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:80:1/1:0:37:0:26:./.:1:2:0:9:1/1:0:8:0/1:15:84:.:3109:.
chr15	91342238	HG2_10X_SVrefine210Xhap12_10816	C	CACAAAAATTAGCCAGGTGTGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCGGTGAGCCGAGATCATGCCATTGTACTCCAGCCTGAGCAACAAGAACGAAACTCCATCTTGAAAAAAAAAAAAGATTAGGAAATGGATGGAAGCATGTTAACAAATAGAACAAAATGCAATAAAGCCACAACTCAAAATGAATGTAGGGAAGATTTATAACAGAAAAGGTCCCGTCAGCCAGGCAAAACCCCAACACTAAGCATCAGTCTGGAAGTCTAGAGGTACGAGAGGATAGGAGTGAAACCAGAGGAGCCAAAATTAGGAAGTGGGACTAGACATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCTACGTAGGAGGATTGCCTAAGCCCAGGAGTTCGAGACTAGCCTGGGCAACATGGCAAAATACCGTCTCTACAAAAAAAAATTACAAAAATTAGCCAGGCATGGAGGCACATGCCTGTAGTCTCAGCTACTCAGGAGGCTGAGGTGGGAAGGTTTCTTGAGCCCAGGAGGAGGAAGTTGCAGTGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAGAAAAATAGAAAACGTGCCCACAAAAGAACTGCATAGAATGCCTGGAATTGACTGAAGAACAAAAATAAATGAAGTGATTGCCTAAAGAGTAGAAGGGCCGCTGAATTAGGGGTCGGAGCCCCTAAGTGGCATTTGGCAACTGCCCGGCCTACCTAAAGTCTGGTCCCACCTACTTGCCCTAAAGCAAACCTGACAATTAAATATCCCCATTCAGGGAAGGAATTCGGGAGGACGTAAATCTAGATAGAAAATAACAGAAGAAACCCACCTAAAAAGTTTTACCTAGTCCCTGAAAGTTACATAGAAATGAACGGTAAAGGCTGAGCTTGGTAGTTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACAAGGTCAAGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACCAAAAAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10816:HG2_PB_pbsv_15625:HG4_PB_SVrefine2Falcon1Dovetail_9519:HG4_PB_pbsv_15528:HG4_PB_HySA_22744:HG3_PB_SVrefine2Falcon1Dovetail_9462:HG2_PB_SVrefine2Falcon1plusDovetail_3946:HG2_PB_SVrefine2Falcon2Bionano_7734:HG4_PB_SVrefine2PBcRDovetail_7758;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10816:HG4_PB_SVrefine2PBcRDovetail_7758;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0516474;ClusterMaxSizeDiff=0.0498664;ClusterMaxEditDist=0.20826;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=1110;DistBack=4194;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=166;REFWIDENED=15:91342239-91342404;PctSeqSimilarity=0.997;PctSizeSimilarity=1;PctRecOverlap=0.9667;SizeDiff=0;StartDistance=-37;EndDistance=-37;GTMatch=0;TruScore=98;MatchId=1911.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:0|1:29:3:0:20:./.:15:0:2:4:0/1:21:8:0/1:41:81:.:1005:.
chr15	91362441	HG2_PB_SVrefine2Falcon1plusDovetail_3947	T	TTCCACGGCCCCACAGAGGGTTCGGTGACGCCTGGGAAGGTGCCGGGTTCCACGGCCCCACAGAGGGTTCGGTGACGCCTGGGAAGGTGCCGGGTTCCACGGCCCCACAGAGGGTTCGGTGACGCCTGGGAAGTGCCGGGATCCACGGCCCCACAGAGGGTTCGGTGACGCCTGGGAAGGTGCCGGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9521:HG3_PB_assemblyticsfalcon_9149:HG3_PB_SVrefine2Falcon1Dovetail_9464:HG4_PB_pbsv_15530:HG2_PB_SVrefine2Falcon1plusDovetail_3947:HG2_PB_pbsv_15626:HG2_PB_SVrefine2Falcon2Bionano_7735;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3947;NumExactMatchSVs=1;ClusterMaxShiftDist=0.192837;ClusterMaxSizeDiff=0.192837;ClusterMaxEditDist=0.22905;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=187;DistBack=-233;DistForward=-1;DistMin=-233;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=236;REFWIDENED=15:91362442-91362677;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9947;PctRecOverlap=0.9894;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1912.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:26:0|1:33:0:2:25:./.:3:0:1:0:0/1:11:2:./.:.:.:.:.:.
chr15	92514624	HG2_PB_pbsv_15637	C	CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3704:HG2_PB_HySA_28483:HG4_PB_HySA_22758:HG3_PB_pbsv_15288:HG4_PB_pbsv_15538:HG2_PB_pbsv_15637:HG2_PB_SVrefine2PB10Xhap12_11302:HG2_PB_SVrefine2Falcon1plusDovetail_3954;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_15637:HG3_PB_pbsv_15288;NumExactMatchSVs=2;ClusterMaxShiftDist=0.375;ClusterMaxSizeDiff=0.375;ClusterMaxEditDist=0.395833;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=52;DistBack=14232;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=15:92514625-92514640;PctSeqSimilarity=0.9381;PctSizeSimilarity=0.8814;PctRecOverlap=0.8983;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=1914.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:36:1|0:4:32:31:0:./.:3:4:3:9:0/1:2:7:./.:.:.:.:.:.
chr15	93372751	HG2_PB_SVrefine2PBcRplusDovetail_3707	G	GATGAAAAGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4648:HG4_PB_pbsv_15548:HG2_PB_pbsv_15645:HG2_PB_assemblyticsPBcR_8895:HG3_PB_assemblyticsfalcon_9164:HG3_PB_pbsv_15300:HG2_PB_HySA_28497:HG4_PB_SVrefine2PBcRDovetail_7770:HG2_PB_SVrefine2Falcon2Bionano_7743:HG3_Ill_GATKHCSBGrefine_10273:HG2_PB_SVrefine2PBcRplusDovetail_3707:HG2_PB_SVrefine2PB10Xhap12_11307:HG2_PB_SVrefine2Falcon1plusDovetail_3959:HG2_10X_SVrefine210Xhap12_10825:HG4_Ill_MetaSV_1758:HG3_PB_SVrefine2Falcon1Dovetail_9475:HG4_PB_SVrefine2Falcon1Dovetail_9531:HG4_PB_HySA_22764:HG2_PB_PB10Xdip_11172:HG2_PB_PB10Xdip_11171;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10825:HG2_PB_SVrefine2Falcon1plusDovetail_3959:HG2_PB_SVrefine2PB10Xhap12_11307:HG2_PB_SVrefine2PBcRplusDovetail_3707:HG3_Ill_GATKHCSBGrefine_10273;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0791789;ClusterMaxSizeDiff=0.079063;ClusterMaxEditDist=0.17689;PBcalls=16;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=341;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=15:93372752-93372761;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9971;PctRecOverlap=0.9942;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1916.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:2:22:0:8:./.:0:3:0:5:1/1:0:14:1/1:2:56:.:.:.
chr15	94595023	HG2_PB_SVrefine2PB10Xhap12_11314	C	CACACAGATGCACAAACACCACACACATACACACCACACACAAACATATACATACACCACACACAGACACCCCACACACACATACACTCACACACAGAGACACACAGCACACACAGATACACATACACACATATATACATACACACCACACACACATACAGACACTCCTCCCAAACACACACACACACGCAGATACACACACACCACACACAAACACATACACATACACAAACCACACACATACATACACACCACACACACACTCATAGATACACACACCACACACACATACACATACACACATATACACACGTACACACACACCACACACACATACACAGATACCTCACACACACATACACTCACACACAGATACACCACACACAAACACACGCATATACACACATACACACACACCACACACACATATGCAAACACACCACACACACATATACATACACAGCACACACAGACACACACACATACACACAGATACACACACACCACATACGTACACCACACACACATATACATATACATCACACGAACATACACAAACACCCCCCAAACACACAGATACATACACACACCACACACACATACACACCACACACAAATACACAGATGTCCCCCACACACCTACACTCACACACAGATACACCACACACAAACACACACATATACACAGACACACATACACTCACACACGGATACACACCACACATACACATACACACATGTACACCACACACATATATACATACACATCACACACACATACACAAACACCCCCCAAACACACTAACACACAGATACATACACACACCACACACATACATACACACCACACACATATGCATACACCACACACACAGACACCCCCCCACACACATACACTCACACACAGATACAGCACACACAAATACACATACACACATATATACATACACAGGCACCCTCCCCCCACACACACACAGATACACACACACCACACACACATACACACACATATAACATACACCACACCACATATACACATACACTACACATACATACACACCACACACACACAGACACCCCCCACATACACTCACACACACATACACACACATACACACCACACACACACAGATACCCCCACACACAGATACACCACACACATACACACATGTACACATACATAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9483:HG2_PB_HySA_28516:HG4_PB_pbsv_15554:HG2_PB_pbsv_15652:HG4_Ill_GATKHCSBGrefine_10719:HG3_Ill_GATKHCSBGrefine_10278:HG2_Ill_GATKHCSBGrefine_10370:HG2_Ill_MetaSV_1707:HG2_PB_PB10Xdip_11177:HG2_PB_PB10Xdip_11176:HG2_Ill_breakscan11_4649:HG4_PB_HySA_22780:HG4_Ill_SVrefine2DISCOVARDovetail_11047:HG3_Ill_SVrefine2DISCOVARDovetail_11249:HG2_PB_SVrefine2PB10Xhap12_11314:HG2_PB_SVrefine2Falcon2Bionano_7749:HG2_Ill_SVrefine2DISCOVARplusDovetail_4410:HG2_PB_SVrefine2PBcRplusDovetail_3714:HG4_PB_SVrefine2PBcRDovetail_7773:HG3_PB_SVrefine2PBcRDovetail_7373:HG2_PB_SVrefine2Falcon1plusDovetail_3965:HG4_PB_SVrefine2Falcon1Dovetail_9536;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4410:HG2_PB_SVrefine2Falcon2Bionano_7749:HG2_PB_SVrefine2PB10Xhap12_11314:HG3_Ill_SVrefine2DISCOVARDovetail_11249:HG4_Ill_SVrefine2DISCOVARDovetail_11047;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0834697;ClusterMaxSizeDiff=0.0834697;ClusterMaxEditDist=0.209167;PBcalls=14;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=1183;DistBack=9551;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=161;REFWIDENED=15:94595024-94595184;PctSeqSimilarity=0.9865;PctSizeSimilarity=0.9883;PctRecOverlap=0.878;SizeDiff=-14;StartDistance=-139;EndDistance=-139;GTMatch=0;TruScore=95;MatchId=1918.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:101:./.:0:0:0:5:./.:182:110:121:130:./.:0:7:1/1:3:253:.:1253:.
chr15	95285582	HG2_Ill_250bpfermikitraw_20801	C	CTAGCTACAGAGTACTGATTGGTGTGTTTTTACAGAGCACTGATTGGTGCATTTTACAAACCTCTAGT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_20801:HG2_PB_pbsv_15655:HG4_PB_pbsv_15560:HG4_PB_HySA_22790:HG2_PB_HySA_28522:HG4_Ill_svaba_19434:HG4_Ill_manta_3652:HG4_Ill_Krunchall_21467:HG4_Ill_GATKHC_24836:HG4_Ill_GATKHCSBGrefine_10724:HG4_Ill_250bpfermikitraw_20463:HG4_Ill_150bpfermikitraw_19715:HG2_Ill_svaba_19471:HG2_Ill_manta_4298:HG2_Ill_Krunchall_21154:HG2_Ill_GATKHC_24947:HG2_Ill_GATKHCSBGrefine_10373;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20801:HG4_Ill_svaba_19434:HG4_Ill_manta_3652:HG4_Ill_Krunchall_21467:HG4_Ill_GATKHC_24836:HG4_Ill_GATKHCSBGrefine_10724:HG4_Ill_250bpfermikitraw_20463:HG4_Ill_150bpfermikitraw_19715:HG2_Ill_svaba_19471:HG2_Ill_manta_4298:HG2_Ill_Krunchall_21154:HG2_Ill_GATKHC_24947:HG2_Ill_GATKHCSBGrefine_10373;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0992908;ClusterMaxSizeDiff=0.070922;ClusterMaxEditDist=0.181818;PBcalls=4;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=5342;DistForward=2628;DistMin=2628;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=85;REFWIDENED=15:95285521-95285605;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1919.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:34:./.:17:24:21:9:./.:26:0:3:11:0/1:21:24:./.:.:.:.:.:.
chr15	96127766	HG2_PB_HySA_28529	T	TATAAGATGAAATTGACACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCTCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_9191:HG4_PB_pbsv_15564:HG2_PB_pbsv_15658:HG3_PB_SVrefine2Falcon1Dovetail_9487:HG2_PB_assemblyticsfalcon_9215:HG2_PB_HySA_28529:HG4_PB_HySA_22805:HG2_Ill_breakscan11_4650:HG4_PB_SVrefine2PBcRDovetail_7777:HG2_PB_SVrefine2Falcon1plusDovetail_3968:HG4_PB_SVrefine2Falcon1Dovetail_9542;NumClusterSVs=11;ExactMatchIDs=HG2_PB_HySA_28529;NumExactMatchSVs=1;ClusterMaxShiftDist=0.152824;ClusterMaxSizeDiff=0.152824;ClusterMaxEditDist=0.203046;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=295;DistBack=31628;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=15:96127767-96127767;PctSeqSimilarity=0.9916;PctSizeSimilarity=0.9966;PctRecOverlap=0.9933;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1920.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:52:0|1:29:0:0:39:./.:26:0:0:4:0/1:38:15:./.:.:.:.:.:.
chr15	96268943	HG4_Ill_svaba_19441	C	CATACTTACAACGAACAAATTAAATTAAAATTTGCCTTTAACAGAAAGGTGCTATGGGACT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4651:HG3_PB_HySA_23629:HG4_PB_HySA_22806:HG3_PB_pbsv_15318:HG3_PB_assemblyticsfalcon_9192:HG2_PB_HySA_28530:HG4_PB_SVrefine2Falcon1Dovetail_9543:HG4_Ill_svaba_19441:HG4_Ill_manta_3653:HG4_Ill_SVrefine2DISCOVARDovetail_11058:HG4_Ill_Krunchall_21474:HG4_Ill_GATKHC_24849:HG4_Ill_GATKHCSBGrefine_10728:HG4_Ill_Cortex_1224:HG4_Ill_250bpfermikitraw_20469:HG4_Ill_150bpfermikitraw_19722:HG3_PB_SVrefine2PBcRDovetail_7377:HG3_PB_SVrefine2Falcon1Dovetail_9488:HG3_Ill_svaba_19632:HG3_Ill_manta_3504:HG3_Ill_Spiral_16154:HG3_Ill_SVrefine2DISCOVARDovetail_11258:HG3_Ill_Krunchall_20762:HG3_Ill_GATKHC_24801:HG3_Ill_GATKHCSBGrefine_10284:HG3_Ill_Cortex_1275:HG3_Ill_250bpfermikitraw_20210:HG3_Ill_150bpfermikitraw_19675:HG2_PB_SVrefine2Falcon2Bionano_7753:HG2_Ill_svaba_19476:HG2_Ill_manta_4299:HG2_Ill_SpiralSDKrefine_5768:HG2_Ill_Krunchall_21158:HG2_Ill_GATKHC_24958:HG2_Ill_GATKHCSBGrefine_10376:HG2_Ill_Cortex_2983:HG2_Ill_250bpfermikitraw_20806:HG2_Ill_150bpfermikitraw_19638:HG2_10X_SVrefine210Xhap12_10833:HG2_PB_pbsv_15659;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10833:HG2_Ill_150bpfermikitraw_19638:HG2_Ill_250bpfermikitraw_20806:HG2_Ill_Cortex_2983:HG2_Ill_GATKHCSBGrefine_10376:HG2_Ill_GATKHC_24958:HG2_Ill_Krunchall_21158:HG2_Ill_SpiralSDKrefine_5768:HG2_Ill_manta_4299:HG2_Ill_svaba_19476:HG2_PB_SVrefine2Falcon2Bionano_7753:HG3_Ill_150bpfermikitraw_19675:HG3_Ill_250bpfermikitraw_20210:HG3_Ill_Cortex_1275:HG3_Ill_GATKHCSBGrefine_10284:HG3_Ill_GATKHC_24801:HG3_Ill_Krunchall_20762:HG3_Ill_SVrefine2DISCOVARDovetail_11258:HG3_Ill_Spiral_16154:HG3_Ill_manta_3504:HG3_Ill_svaba_19632:HG3_PB_SVrefine2Falcon1Dovetail_9488:HG3_PB_SVrefine2PBcRDovetail_7377:HG4_Ill_150bpfermikitraw_19722:HG4_Ill_250bpfermikitraw_20469:HG4_Ill_Cortex_1224:HG4_Ill_GATKHCSBGrefine_10728:HG4_Ill_GATKHC_24849:HG4_Ill_Krunchall_21474:HG4_Ill_SVrefine2DISCOVARDovetail_11058:HG4_Ill_manta_3653:HG4_Ill_svaba_19441:HG4_PB_SVrefine2Falcon1Dovetail_9543;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.227642;PBcalls=10;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=15;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=60;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=15:96268944-96268945;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1921.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:44:0|1:32:4:4:37:1|0:1:33:26:0:0/1:35:26:./.:.:.:.:.:.
chr15	97321226	HG2_Ill_MetaSV_1710	C	CAAAGAGTGACAGCAGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGGGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9545:HG3_PB_pbsv_15321:HG2_Ill_breakscan11_4652:HG2_PB_PB10Xdip_11187:HG3_PB_assemblyticsfalcon_9203:HG2_PB_HySA_28538:HG3_Ill_GATKHCSBGrefine_10287:HG2_PB_SVrefine2Falcon2Bionano_7756:HG2_Ill_MetaSV_1710:HG2_Ill_GATKHCSBGrefine_10380:HG2_PB_SVrefine2PB10Xhap12_11320:HG3_PB_SVrefine2Falcon1Dovetail_9489;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10380:HG2_Ill_MetaSV_1710:HG2_PB_SVrefine2Falcon2Bionano_7756:HG3_Ill_GATKHCSBGrefine_10287;NumExactMatchSVs=4;ClusterMaxShiftDist=0.207221;ClusterMaxSizeDiff=0.204082;ClusterMaxEditDist=0.276295;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=326;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=15:97321227-97321243;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1922.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:25:./.:12:13:12:8:1|0:0:14:23:0:0/1:17:8:0/1:5:19:.:.:.
chr15	97585929	HG3_PB_HySA_23639	C	CGCAGAATACTACTTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACTCGCCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4653:HG3_PB_assemblyticsfalcon_9209:HG3_PB_SVrefine2Falcon1Dovetail_9491:HG3_PB_pbsv_15326:HG2_PB_HySA_28547:HG2_PB_pbsv_15667:HG3_PB_HySA_23639:HG2_PB_assemblyticsfalcon_9231:HG2_PB_SVrefine2Falcon1plusDovetail_3970:HG4_PB_SVrefine2Falcon1Dovetail_9547:HG3_PB_SVrefine2PBcRDovetail_7382;NumClusterSVs=11;ExactMatchIDs=HG3_PB_HySA_23639;NumExactMatchSVs=1;ClusterMaxShiftDist=0.229617;ClusterMaxSizeDiff=0.222962;ClusterMaxEditDist=0.267112;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=78864;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=15:97585930-97585942;PctSeqSimilarity=0.9878;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=1923.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:42:0|1:22:1:0:36:./.:0:3:25:0:0/1:34:8:0/1:8:37:.:.:.
chr15	98184421	HG2_Ill_150bpfermikitraw_19659	A	AATTATAGAAATATATGTAATTATATAATATATAATTATAGAAATATATGTAATTATATAATATAT	20	PASS	ClusterIDs=HG2_PB_pbsv_15669:HG3_Ill_Krunchall_20784:HG3_Ill_250bpfermikitraw_20234:HG3_Ill_150bpfermikitraw_19699:HG2_Ill_Krunchall_21176:HG2_Ill_250bpfermikitraw_20829:HG2_Ill_150bpfermikitraw_19659;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19659:HG2_Ill_250bpfermikitraw_20829:HG2_Ill_Krunchall_21176:HG3_Ill_150bpfermikitraw_19699:HG3_Ill_250bpfermikitraw_20234:HG3_Ill_Krunchall_20784;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.149254;PBcalls=1;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=85;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=15:98184420-98184422;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1924.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:50:0|1:44:10:8:35:1|0:0:8:7:0:0/1:15:11:./.:.:.:.:.:.
chr15	98349213	HG2_Ill_MetaSV_1713	T	TTTGAATTCACTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGATTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_11194:HG2_PB_SVrefine2PB10Xhap12_11326:HG2_PB_SVrefine2Falcon2Bionano_7760:HG2_PB_pbsv_15671:HG4_Ill_MetaSV_1768:HG4_PB_pbsv_15574:HG4_Ill_GATKHCSBGrefine_10737:HG2_Ill_SVrefine2DISCOVARplusDovetail_4428:HG2_Ill_MetaSV_1713:HG2_Ill_GATKHCSBGrefine_10384:HG4_PB_HySA_22822:HG2_PB_PB10Xdip_11195;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10384:HG2_Ill_MetaSV_1713:HG2_Ill_SVrefine2DISCOVARplusDovetail_4428:HG4_Ill_GATKHCSBGrefine_10737:HG4_Ill_MetaSV_1768;NumExactMatchSVs=5;ClusterMaxShiftDist=0.276817;ClusterMaxSizeDiff=0.269896;ClusterMaxEditDist=0.298611;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=154;DistBack=10198;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=15:98349214-98349227;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1925.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:30:0|1:32:1:0:28:0|1:18:0:0:9:0/1:24:6:./.:.:.:.:.:.
chr15	98622503	HG2_10X_SVrefine210Xhap12_10841	T	TGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACATTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACATGTATGTTTATTGCAGCATTATTCACAATAGCAAAGACATGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATGTACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATTAAAAAAAAAAATTAAAAAAAAAGAAATATTTATTTAAAGAATAAATAGATCATAACAGCACATAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11328:HG4_PB_SVrefine2Falcon1Dovetail_9552:HG4_Ill_MetaSV_1770:HG2_Ill_MetaSV_1715:HG2_10X_SVrefine210Xhap12_10841:HG2_PB_SVrefine2Falcon1plusDovetail_3974:HG2_PB_HySA_28556:HG2_PB_assemblyticsfalcon_9236:HG4_PB_pbsv_15577:HG2_PB_PB10Xdip_11196:HG2_PB_pbsv_15673;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10841:HG2_Ill_MetaSV_1715:HG4_Ill_MetaSV_1770;NumExactMatchSVs=3;ClusterMaxShiftDist=0.138614;ClusterMaxSizeDiff=0.138614;ClusterMaxEditDist=0.233857;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=885;DistBack=23497;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=15:98622504-98622507;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1926.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:35:0|1:32:1:0:22:0|1:28:0:0:9:0/1:36:20:0/1:29:111:.:.:.
chr15	99553972	HG4_Ill_SVrefine2DISCOVARDovetail_11072	CTGTCG	GTCGCAAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAATAAAATAAAATTCCTGGTAGTTTTCTGTGATATATCA	20	PASS	ClusterIDs=HG2_Ill_Krunchall_21190:HG3_Ill_250bpfermikitraw_20247:HG3_PB_pbsv_15339:HG3_Ill_150bpfermikitraw_19713:HG2_Ill_250bpfermikitraw_20841:HG4_Ill_250bpfermikitraw_20508:HG4_Ill_150bpfermikitraw_19764:HG2_PB_HySA_28566:HG2_PB_assemblyticsfalcon_9248:HG2_PB_SVrefine2Falcon1plusDovetail_3979:HG3_Ill_manta_3511:HG3_Ill_Spiral_16181:HG2_Ill_manta_4306:HG4_PB_SVrefine2PBcRDovetail_7788:HG4_Ill_manta_3659:HG4_Ill_SVrefine2DISCOVARDovetail_11072:HG2_PB_assemblyticsPBcR_8955:HG2_PB_SVrefine2PBcRplusDovetail_3727:HG2_PB_SVrefine2PB10Xhap12_11334:HG2_PB_SVrefine2Falcon2Bionano_7764:HG4_PB_SVrefine2Falcon1Dovetail_9557:HG3_PB_SVrefine2Falcon1Dovetail_9499:HG2_PB_PB10Xdip_11204:HG2_PB_PB10Xdip_11205:HG2_PB_pbsv_15682:HG4_PB_pbsv_15587:HG3_Ill_Krunchall_20800:HG3_Ill_GATKHC_24845:HG3_Ill_GATKHCSBGrefine_10304:HG2_Ill_GATKHC_24994:HG2_Ill_GATKHCSBGrefine_10392:HG4_Ill_GATKHC_24887:HG4_Ill_GATKHCSBGrefine_10748:HG4_Ill_Krunchall_21515;NumClusterSVs=34;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7764:HG2_PB_SVrefine2PB10Xhap12_11334:HG2_PB_SVrefine2PBcRplusDovetail_3727:HG2_PB_assemblyticsPBcR_8955:HG4_Ill_SVrefine2DISCOVARDovetail_11072:HG4_Ill_manta_3659:HG4_PB_SVrefine2PBcRDovetail_7788;NumExactMatchSVs=7;ClusterMaxShiftDist=0.306748;ClusterMaxSizeDiff=0.306748;ClusterMaxEditDist=0.347826;PBcalls=15;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=91;DistBack=-6;DistForward=20429;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=15:99553978-99553971;PctSeqSimilarity=0.9843;PctSizeSimilarity=0.9785;PctRecOverlap=0.9583;SizeDiff=-2;StartDistance=-5;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1927.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:1/1:1:9:0:7:1/1:0:7:0:5:1/1:0:45:./.:.:.:.:.:.
chr15	99630142	HG2_PB_PB10Xdip_11208	C	CAGGTGTGGTGGCTCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGGATCACTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGATCACACCACTGCACTCCAGCCTGGGCGACTGAGTGAGACTTCCTCTCAAAAAAAGAAAAAAAAAAAAAGAAGGAAAAGATATTTCCTAACTATCCTAAATTCTGTTACATTGACACAAACAAAGATACTTGTTCCATTATAAGTTTCTGGAGAAATCAGAATGAAAAGCTCCATGCCAGTATTATTTCAACAGTCCCTGAAACACGGCTTTGGTGAAGCACTTGAAGAGCTAATGCTTTATACATGGGCATCTCCACTCGGCATCTGGAGTGTTAGTTGCACTTGCTATATTTTAATTTATTAGAATATGTATTTTAAAACAGTAGGCTGGAAATCTGACATATATCCTGATTTTTTTTATCACATTGTCATATAAGGGTGTTTCTAAATTCATTGCCTTTCAGAAGAGAATAGAGCTCCTTGAAAATCGATTAAGTATATTTAATCACGCAATCCAGTCTCTCAGAGGCACCGGAAACATTCTGCTGCTCCCTTGACAGGATGGGCTGTGAGTCTGGCCAGGCCTTTCTGCCTAGCCTTACTGCACAGTCATACTTCTCCTCCGGAATCCTGCCACCCTCCCAGGTGCCACGGCCTCCCTGGTTGTTCCTCTGCCCAGGGTAGAGCCCAAGGGAACAGGTCACAGGCGCCCTTCCCTGGGAAGCACCAGTCCACTCCCGGCCTTCTCGACAACTCTTCCACTCTGCCAAGGGGGAAAAATCTTTCCTGGCCTGGGGGTTCAGGGTGGAGGGTAGAAAGCTGTGTTCTTTCTCCAGGGTAGTTCTCCCAGGTGCCGCATACACGAGGTTTCTTCCATCACCCCAAGACTGAGGCATTGGAAAAGCGAAGGCCAGTGTCTGAATCTTTGCCCTTCCCTACTTTCTGCTGATCATCCTTCCCTAAGTGACCTAGAAAGCTGACAACATGGGGAAGGGGAATCTGGCTATTATTTCAAATATTACCCACCCTCTCCCATACTAGCAGCCCTGGGTCTCTCGTGCCTCCTGTCTAATCAAATCCCAGAAAATGACTGAGCCTCCACCTGACTCAGTATTCATGTCTGCCCAGGTATTCTAACCTTGTGTCCTGCTGTACAAAGTTCAACAGGAATTACTTCCAGGTTTGAGTGTGGTCTGGGGTTGTCTTCACACCATGGCCTTCTACTAACTTGCCAGGTAAAGACTTGACTGTTTGGGATCTGCTGCCTCCCCGCCCCCACCCCCACCAGCCAAGATCCCTGTGTCAAAATCCAGTGTGATCTCAGTGGAAAAAGCGTATCTAGGACCCAAGATCTGGTACTTGTCACCCCATGACCCACTCCGACTCGTCCTGTCACACTGAGCAAATTGTTCAAAACTCTGTGGCTTGGTGTTGTTGCAAAGTATCAATGACATTTGCTTCCTCCCTTCCTGACAGTTACGTGGGGAGAGCCAGTGAAACACTGTACTACCGTCACTAGCAAACAACAGCTTATTGGACTTGAGACACTTTCACATCTATTATCGCATCTATCCAAATACTTGGCTTCAGAAAAAATAATCCTCATGGGGTATACAAATATAAAGGAGGAGAAATTGCTCTTTAATACACCAAAAAATACCGAGTTCCTTTATCTTCCGGAATTCCGTTCCCTAGCACAGTATTTCCATTTTGATGGGTTTTTCTGCTATTCACTCCTCAAGCATGTCTTTATTTCATTCACAAAGGGAAAACTCACATGGTGGAGCAGCAGTGCGTTCAGCTCTGTGTGGTCCAGCAATTGGAAAGGGATCTCTTGGAAGGAGCAAGGAAGCTACCGCAGTGATCTTGGTGAAGTAGCCAGGTTTGCTGAAATCAATAGGAGGTTTGCAGCCAAACGACTCTCTGGTCTTGGCCGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTAGGCAGATCATGAGGTCAAGAGCTCAAGACCATCCTGGCCAACATGGTGAAACCTCGTCTCTACTAAAAATACAAAAAATTAGCTGGGTGTGGTGGCACGTGCCTGTCGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGAAGGTTTCAGTGAGCCGAGATTGCACCACTGCACTCCAGCCTGGTGACACAGCAAGACTCTGTCTAAAACAATAATAATAAAAAAAGAACTCTCTGGTCTTAAGTCCCGTAAAAGACTTGACTCTCAGACTGGGCATCCCATCAGCTTCTCCCTCTTCCCTCCAGCCTCACACATCTTGTTTCTTACCCATACTTCTCCTTTATTCCACAGCAACACCAAAAAGTCCAAAGCTCCCCAACCAGTTAAGACTATTTAGATCTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTATGTTGCCCAGGCTGGCCTTGAACTCCTGGGCCCAAGTGATCCTCCTGCCTCAGCCTTCTGAGTAGCCAGGAATATGGGCATGGCGGCTTCAATCTTTTTGATTCAAGAGGCAATTATTAAGTTCAAGATGGGGTTTATCTAAATGACCACATTACTTAAATAAGAAAATACTGCAACAAAAGCCCATTTGATAAAGCAAATGCTTTCAGAGCAACACACTTTTAATCTTCCAGAGTCATCTCCCACCCATCCACACCTCTTTTCTTATTTTTCCTAATTTCTTTTCTTTTTTTTTGAGACGTAGTCTCACTGTGTCACCCAGGCTGCAGAACAGTGGCATGGTCTCGGCTCACTGCAAACTCTGCCTCCCTGGTTCAAGTGATCCTCCTGTCTCAGCCTCCCAGGCAGCTGGGATTACAGGCATGCGCCACCACGCCCAGCTAATTTTTGTATTTTCAGTAGAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTCAAACTCCTGACATCGGGTGATCTGCCCGCCTCAGCCTCCCGAAGTGCTGGGATTA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_11208:HG4_PB_pbsv_15589:HG3_PB_pbsv_15341:HG2_PB_pbsv_15684:HG2_PB_SVrefine2Falcon1plusDovetail_3981:HG2_PB_SVrefine2Falcon2Bionano_7766:HG3_Ill_SVrefine2DISCOVARDovetail_11279:HG2_Ill_SVrefine2DISCOVARplusDovetail_4437:HG3_PB_SVrefine2PBcRDovetail_7392:HG2_10X_SVrefine210Xhap12_10852:HG4_PB_SVrefine2PBcRDovetail_7790:HG4_Ill_SVrefine2DISCOVARDovetail_11074:HG2_PB_SVrefine2PB10Xhap12_11336:HG2_PB_SVrefine2PBcRplusDovetail_3729:HG3_PB_SVrefine2Falcon1Dovetail_9501:HG4_PB_SVrefine2Falcon1Dovetail_9559:HG2_Ill_breakscan11_4655:HG2_PB_PB10Xdip_11209;NumClusterSVs=18;ExactMatchIDs=HG2_PB_PB10Xdip_11208:HG2_PB_PB10Xdip_11209;NumExactMatchSVs=2;ClusterMaxShiftDist=0.055037;ClusterMaxSizeDiff=0.0547152;ClusterMaxEditDist=0.167917;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=3025;DistBack=2283;DistForward=14592;DistMin=2283;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:99630143-99630142;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.999;PctRecOverlap=0.9987;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1928.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:116:1/1:0:28:0:26:./.:3:11:0:6:1/1:0:35:1/1:7:377:.:3008:.
chr15	100810976	HG2_Ill_MetaSV_1724	A	ACCATTTTAAACATTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACTACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGC	20	PASS	ClusterIDs=HG4_PB_HySA_22850:HG2_PB_assemblyticsfalcon_9267:HG2_PB_assemblyticsPBcR_8971:HG2_PB_pbsv_15696:HG4_PB_pbsv_15604:HG2_PB_SVrefine2PB10Xhap12_11351:HG2_PB_HySA_28588:HG4_Ill_SVrefine2DISCOVARDovetail_11083:HG4_Ill_MetaSV_1779:HG4_Ill_GATKHCSBGrefine_10756:HG3_PB_SVrefine2Falcon1Dovetail_9513:HG2_PB_SVrefine2PBcRplusDovetail_3740:HG2_PB_SVrefine2Falcon1plusDovetail_3992:HG2_Ill_SVrefine2DISCOVARplusDovetail_4443:HG2_Ill_MetaSV_1724:HG2_Ill_GATKHCSBGrefine_10397:HG3_Ill_SVrefine2DISCOVARDovetail_11282:HG3_Ill_MetaSV_1831:HG3_Ill_GATKHCSBGrefine_10310:HG3_PB_pbsv_15358;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10397:HG2_Ill_MetaSV_1724:HG2_Ill_SVrefine2DISCOVARplusDovetail_4443:HG2_PB_SVrefine2Falcon1plusDovetail_3992:HG2_PB_SVrefine2PBcRplusDovetail_3740:HG3_PB_SVrefine2Falcon1Dovetail_9513:HG4_Ill_GATKHCSBGrefine_10756:HG4_Ill_MetaSV_1779:HG4_Ill_SVrefine2DISCOVARDovetail_11083;NumExactMatchSVs=9;ClusterMaxShiftDist=0.144262;ClusterMaxSizeDiff=0.144262;ClusterMaxEditDist=0.193443;PBcalls=11;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=308;DistBack=15153;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=15:100810977-100810993;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1931.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:32:0|1:26:1:1:25:0|1:15:0:0:5:0/1:35:13:0/1:6:36:.:.:.
chr15	100812803	HG2_PB_assemblyticsfalcon_9268	GATTTAGGGTTT	TTTCTGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGTCAGGAGATCGAGACCATCCCGGCTATAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTAGTGGCGGGCGCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGCGGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_28589:HG3_PB_pbsv_15359:HG4_PB_pbsv_15605:HG2_PB_assemblyticsfalcon_9268:HG2_PB_pbsv_15697:HG2_PB_SVrefine2Falcon1plusDovetail_3993:HG2_PB_assemblyticsPBcR_8972:HG4_PB_HySA_22851:HG2_Ill_breakscan11_4656:HG2_PB_SVrefine2PBcRplusDovetail_3741:HG3_PB_SVrefine2Falcon1Dovetail_9514;NumClusterSVs=11;ExactMatchIDs=HG2_PB_assemblyticsfalcon_9268;NumExactMatchSVs=1;ClusterMaxShiftDist=0.144361;ClusterMaxSizeDiff=0.144361;ClusterMaxEditDist=0.189474;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=302;DistBack=-17;DistForward=2;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=15:100812815-100812802;PctSeqSimilarity=0.952;PctSizeSimilarity=0.9042;PctRecOverlap=0.9373;SizeDiff=-32;StartDistance=3;EndDistance=14;GTMatch=0;TruScore=93;MatchId=1932.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:28:0|1:20:2:2:23:./.:31:0:3:5:0/0:48:2:0/1:19:23:.:.:.
chr15	100898979	HG2_PB_SVrefine2Falcon1plusDovetail_3994	C	CGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_15698:HG2_PB_SVrefine2Falcon1plusDovetail_3995:HG2_Ill_MetaSV_1725:HG2_PB_assemblyticsfalcon_9270:HG2_PB_SVrefine2Falcon1plusDovetail_3994:HG4_PB_pbsv_15606:HG2_PB_HySA_28591;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3994:HG2_PB_assemblyticsfalcon_9270;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0551471;ClusterMaxSizeDiff=0.0514706;ClusterMaxEditDist=0.165766;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=266;DistBack=-1;DistForward=15385;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=15:100898980-100898979;PctSeqSimilarity=0.9981;PctSizeSimilarity=0.9963;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1933.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:46:32:1|0:5:20:36:2:./.:36:0:1:9:0/1:34:4:./.:.:.:.:.:.
chr15	100931143	HG2_PB_HySA_28592	T	TTTCTAAGTGTATAAATTTATTTTTTTTTTTTATTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTGGTTACTGTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9515:HG2_PB_pbsv_15699:HG2_PB_assemblyticsfalcon_9271:HG2_PB_HySA_28592:HG4_PB_pbsv_15607:HG2_PB_SVrefine2Falcon1plusDovetail_3996:HG4_Ill_MetaSV_1780:HG2_Ill_MetaSV_1726;NumClusterSVs=8;ExactMatchIDs=HG2_PB_HySA_28592;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0856661;ClusterMaxSizeDiff=0.0856661;ClusterMaxEditDist=0.266007;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1447;DistBack=-67;DistForward=-1;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=15:100931144-100931144;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9986;PctRecOverlap=0.9986;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1934.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:./.:11:17:12:10:./.:36:0:5:4:0/1:32:16:0/1:59:188:.:1399:.
chr15	101481643	HG2_Ill_GATKHC_25018	G	GTGTCTTTGTGTGTGTGTGTGCCTGTATCTGTGTGCGTCTGTGTCTCTGTGTGTGTCTGTGTGTGTGTGTCTGTGTCTCTGTGTGTGTC	20	PASS	ClusterIDs=HG2_Ill_scalpel_14809:HG2_PB_assemblyticsPBcR_8989:HG2_PB_HySA_28606:HG2_PB_SVrefine2PBcRplusDovetail_3750:HG2_PB_SVrefine2PB10Xhap12_11363:HG2_PB_SVrefine2Falcon2Bionano_7782:HG4_Ill_GATKHC_24924:HG4_Ill_GATKHCSBGrefine_10770:HG3_Ill_GATKHC_24868:HG3_Ill_GATKHCSBGrefine_10321:HG2_Ill_GATKHC_25018:HG2_Ill_GATKHCSBGrefine_10408:HG2_PB_pbsv_15712:HG3_PB_pbsv_15379:HG2_PB_assemblyticsfalcon_9294:HG4_PB_pbsv_15622:HG3_PB_HySA_23711:HG4_Ill_scalpel_14416:HG3_Ill_scalpel_15070:HG2_PB_SVrefine2Falcon1plusDovetail_4007;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10408:HG2_Ill_GATKHC_25018:HG3_Ill_GATKHCSBGrefine_10321:HG3_Ill_GATKHC_24868:HG4_Ill_GATKHCSBGrefine_10770:HG4_Ill_GATKHC_24924;NumExactMatchSVs=6;ClusterMaxShiftDist=0.164948;ClusterMaxSizeDiff=0.164948;ClusterMaxEditDist=0.24;PBcalls=11;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=7;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=15:101481642-101481647;PctSeqSimilarity=0.9757;PctSizeSimilarity=0.9565;PctRecOverlap=0.8495;SizeDiff=-4;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=92;MatchId=1936.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:0:20:2:14:./.:53:143:76:181:0/1:4:15:./.:.:.:.:.:.
chr15	101671305	HG2_PB_pbsv_15717	T	TGGCGGGCTGGGCAAGGGAAGAGCGGTATGGGGAGTTAGTATTTAATGGCAACAGAGTTTTGATTTCATAGGTAATGAGAAGTTTTCTGTGGAGGGGCTGGGGCAAGGGAAGAGCGGCATGGGGAGTTTAGTAAATTTAATGAAGCCACAGAGTTTTGATTTATAGGATGAGAGTTCTGTGGAGGGGCTGGCCTAAGGGAAGAGCGGATGGGGCGTTAGTATTTAATCCGCGACAGAGTTATTTTGATTTTATATAGGATTGAAGAGTTCTGTGGGAGGGGCCTGGGCCAAGGGAAGATTCGGTAAATGGGAAGTAGTATTTAAGTGGGACCAGAGTTTTGATTTCATAGGATGAGAGTTCTGTGGAGGGCTGGGCAAAAGGGAAGAGCAAGTATGGGGAGTTAGTATTTAATGCGTACAGAGTTTTTGATTTCATAGGATGAGAGTTTCTGTGGGGGGCTGGCGGGAAGAGGGCTGGCGGAGTTAGTAATTTAACGGCGTACAGTTTTGAATTTTATAGGATGAGAGTTTCTGGGGGTCTGGGGGCGAGGCGTATGGGGAGTTTGTTTTTGCGTACGGCAGTTTTGATTTCATCAGGATCGCAGGTTCTGTGGGCGCACTGGGCAAGGGAAGAGCGGCAAGTGGGAGTTAGATTTTCTGCGTACAGAGTTTTGATTTTTATAGGATGAGAGTTCTGTGGAGGGGCTGGGAAGGGAGAGCGGCATGGGGAGTTTTAAGTATTTAATGGCACAGAGTTTTTGATTTTATAGGATGAGAGTTTCTGTGGAGGGGCTGGGCAAGGGACCAAGCGGCAGGGAGTAGTATTTTAATGCGTACAAGAGTTTTTTGATTTTATAGGCTGAGAAAGTTCCTGTGGAGGGGCTGGGCAAGGGAAGAAGCGGCATGGGGAGTTAGTATTTAATGCGTACAGAGTTTATGATTTATAGATGAGAGTTCTGTGGAGGGGCTGGGCAAGGGAAGAGGCGGCATGGGAAGTTTAGTATTTAATGGCGTAACAGAGTTTTTGATTTGATAGGATGAAGATGTTCTGTGGAGGGGGCTGGGCGAAGGAAGGCGGCATGGGACGTTTAGTAATTTATCGTAAGAGTTTTGGATTTTATAGATGAAGAGTTCTGTGGAGGGGCTGGGCAAGGAAGAGGGTTGGGAGTTAGTATTTAATGCGCACAAGAGTTTTTTGATTTATAGGATGAAGAGTTTGTGAGGGGCTGGGCAAGGGAAGAGCGCATGGGGAGTTAAGTATTTAAATCGGCGGCACAGAGTTTTGATTTTATTAGGTGAGAGTCTGTGGAGGGGCCTGGGGCAAGGGAAAGAGCGGTAAATGGGGAAGTTAGTATTTAATGCGCCACAGAGTTTGATTTTATTAGGATGAGAGTTCTGTGGAGGGGCTGGGCAAGGGAAGAGCGGGCATGGGGAGTTAGTATTTAATGCGACACAGAGTTTTGATTTTCATAGGATGAGAGTTCTGTGGAGGGGCTGGGCCAGGGAAGAGCGGCATGGGGAGTTAGTATTTAATGCCGCAACAGAGTTTTTGATTTCAATAGGATGAGAGTTCTGTGGAGGGGCTGGGCAAGGGAAGAGCGGCATGGGGAGTTAGTATTTAATGCGCACAGAAGTTTTGCTTATAGGATGAGAGTTCTGTGGAGGGGCTTGGGCAAGGGAAAGAGCGGTATGGGGAGTTAGTATTTAATGGTACAAGAGTTTTTGAATTTTATAGGATGAGAGTTCCTGTGGAGGGGCTGGGCAAAAAAAAGGGAAAGCGGCATGGGGAGTTAGTATTTAATGAGTACAGAGTTTTGATTTATAGGATGAAGAGTTCTTGTGAGGGGGGCTGGGAGGGAAGAGCGGCATTGGGGAGTTAGTATTAAGTGCGGCACAGAGTTTTGGAATTTCCATAGGATGAGAGTTATGTGGAGGGGCTGGGCAATGGGAAGAGCGGCATGGGGAGTTAGTATTGTATGCGCAAGAGTTTTGATTTCCATAGGATGAGAGTTCTGTGGAGGGGCCTGGCAAGGGAAGAAGGCGGCATGGGGAAGTTTAGTATTTTAAAATGCGGCACAGAGTTTTTGATTTCATAGGATGAGAGTTCTGTGGAGGGGCTGGGCAAAGGGAGAGCCGGTATGGGGAGTTTAGTATTTAATGCGTAGCAGAGTTTTGATTTTATGATGAGTAGTTCTGTGGAGGGGCTGGGGCAAGGGAAGAGGGGCATGGGAGTTTAGTATTTAATGCGTACAGAGTTTTTGATTTCATAGGATGAGAGTCTGTGGAGGGCTGGGCAAGGGAAGAGCGGCTGGGAGTATAGTATTTAATGCGCACAGAGTTTTGATTTCATAGGTGAGATTCTTGTGGAGGGGCCTTGGGCAAAGGGAAAGAGCGGCAATGGGGAGTTAGTTTTTTAATGTGGCACAGAGGTTTGATTTTTATACGGATGAGAAAGTTCTGTGGAGGGGGCTGGCAAGGAAGAGCGGCATGGGGAGTTTAGTTTTAATGCGCACAGAGTGTTTTGATTTCAATAGGATGAGAGTTCTGTGGAGGGGCTGGGCAAGGGAAGAGCGGTAATGGGGAGTTAGTATTTAATGCGCACAGAGTTTTGCCTTTCATAGGTATGAGAGTTCTTGTGGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9532:HG2_PB_pbsv_15717:HG2_PB_SVrefine2PB10Xhap12_11365:HG2_PB_assemblyticsfalcon_9297:HG2_PB_SVrefine2Falcon1plusDovetail_4011:HG3_PB_HySA_23721:HG2_PB_SVrefine2PBcRplusDovetail_3752:HG2_PB_SVrefine2Falcon1plusDovetail_4010:HG2_PB_SVrefine2Falcon2Bionano_7783;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_15717;NumExactMatchSVs=1;ClusterMaxShiftDist=0.162552;ClusterMaxSizeDiff=0.162552;ClusterMaxEditDist=0.244681;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2639;DistBack=21;DistForward=22835;DistMin=21;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=244;REFWIDENED=15:101671063-101671306;PctSeqSimilarity=0.9528;PctSizeSimilarity=0.9655;PctRecOverlap=0.7984;SizeDiff=91;StartDistance=487;EndDistance=487;GTMatch=1;TruScore=90;MatchId=1937.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:87:./.:2:6:4:3:0/0:17:0:22:0:0/0:26:0:0/1:26:69:.:2777:.
chr15	101725618	HG2_Ill_GATKHC_25025	A	ATGGAGCACCCTCCATCCTCCTTCCCTGTGAACACTCTCCATGGAGCACCCTCCATCCCCCTTCCCTGTGAACGC	20	PASS	ClusterIDs=HG3_PB_pbsv_15386:HG4_PB_HySA_22880:HG2_PB_HySA_28615:HG2_PB_pbsv_15718:HG2_PB_PB10Xdip_10237:HG2_10X_SVrefine210Xhap12_10875:HG4_Ill_GATKHC_24931:HG4_Ill_GATKHCSBGrefine_10772:HG3_Ill_GATKHC_24874:HG3_Ill_GATKHCSBGrefine_10323:HG2_Ill_GATKHC_25025:HG2_Ill_GATKHCSBGrefine_10409:HG3_PB_HySA_23722:HG4_Ill_250bpfermikitraw_20543:HG4_Ill_150bpfermikitraw_19789:HG3_Ill_250bpfermikitraw_20274:HG3_Ill_150bpfermikitraw_19732:HG2_Ill_250bpfermikitraw_20868:HG2_Ill_150bpfermikitraw_19687:HG2_PB_assemblyticsfalcon_9298;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10409:HG2_Ill_GATKHC_25025:HG3_Ill_GATKHCSBGrefine_10323:HG3_Ill_GATKHC_24874:HG4_Ill_GATKHCSBGrefine_10772:HG4_Ill_GATKHC_24931;NumExactMatchSVs=6;ClusterMaxShiftDist=0.192771;ClusterMaxSizeDiff=0.192771;ClusterMaxEditDist=0.274286;PBcalls=7;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=74;DistBack=1;DistForward=17;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=160;REFWIDENED=15:101725610-101725769;PctSeqSimilarity=0.9554;PctSizeSimilarity=0.9136;PctRecOverlap=0.9259;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=93;MatchId=1938.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:./.:0:0:1:2:./.:16:3:17:2:./.:24:2:./.:.:.:.:.:.
chr15	101927910	HG3_Ill_manta_3515	C	CCCTCCCCAGACTCTCAGGGAGCATCTCCACCCAGAACCATCTGGCTGGGGGT	20	PASS	ClusterIDs=HG3_PB_HySA_23728:HG4_PB_pbsv_15629:HG4_Ill_svaba_19505:HG4_Ill_scalpel_14420:HG4_Ill_manta_3666:HG4_Ill_Krunchall_21551:HG4_Ill_GATKHC_24932:HG4_Ill_GATKHCSBGrefine_10773:HG4_Ill_250bpfermikitraw_20544:HG4_Ill_150bpfermikitraw_19790:HG3_Ill_svaba_19690:HG3_Ill_scalpel_15076:HG3_Ill_manta_3515:HG3_Ill_Krunchall_20826:HG3_Ill_GATKHC_24877:HG3_Ill_GATKHCSBGrefine_10325:HG3_Ill_250bpfermikitraw_20277:HG3_Ill_150bpfermikitraw_19735:HG2_PB_assemblyticsfalcon_9300:HG2_Ill_svaba_19536:HG2_Ill_scalpel_14814:HG2_Ill_manta_4311:HG2_Ill_Krunchall_21217:HG2_Ill_GATKHC_25028:HG2_Ill_GATKHCSBGrefine_10411:HG2_Ill_250bpfermikitraw_20871:HG2_Ill_150bpfermikitraw_19690:HG2_PB_PB10Xdip_10238:HG4_PB_HySA_22885:HG2_PB_HySA_28618:HG2_PB_pbsv_15721:HG3_PB_pbsv_15389;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19690:HG2_Ill_250bpfermikitraw_20871:HG2_Ill_GATKHCSBGrefine_10411:HG2_Ill_GATKHC_25028:HG2_Ill_Krunchall_21217:HG2_Ill_manta_4311:HG2_Ill_scalpel_14814:HG2_Ill_svaba_19536:HG2_PB_assemblyticsfalcon_9300:HG3_Ill_150bpfermikitraw_19735:HG3_Ill_250bpfermikitraw_20277:HG3_Ill_GATKHCSBGrefine_10325:HG3_Ill_GATKHC_24877:HG3_Ill_Krunchall_20826:HG3_Ill_manta_3515:HG3_Ill_scalpel_15076:HG3_Ill_svaba_19690:HG4_Ill_150bpfermikitraw_19790:HG4_Ill_250bpfermikitraw_20544:HG4_Ill_GATKHCSBGrefine_10773:HG4_Ill_GATKHC_24932:HG4_Ill_Krunchall_21551:HG4_Ill_manta_3666:HG4_Ill_scalpel_14420:HG4_Ill_svaba_19505;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0934579;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.254545;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=26313;DistForward=43;DistMin=43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=15:101927899-101927956;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1940.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:1/1:0:24:1:15:./.:1:9:2:18:1/1:0:51:./.:.:.:.:.:.
chr15	101949386	HG2_PB_SVrefine2PBcRplusDovetail_3754	A	AGCTCGGGGGCTCATGCCTGTAATCCCAGCACTTTGGGCGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCTGTCTCTATTAAAAATACAAGGCCAGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGCGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCTGTCTCTATTAAAAATACAAGGCCAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4012:HG2_PB_PB10Xdip_10239:HG3_PB_pbsv_15390:HG3_PB_SVrefine2Falcon1Dovetail_9535:HG3_PB_HySA_23729:HG2_PB_pbsv_15722:HG3_PB_SVrefine2PBcRDovetail_7420:HG2_PB_SVrefine2PBcRplusDovetail_3754:HG2_PB_SVrefine2PB10Xhap12_11367;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4012:HG2_PB_SVrefine2PBcRplusDovetail_3754:HG2_PB_SVrefine2PB10Xhap12_11367;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0534351;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.231776;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=256;DistBack=18910;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=245;REFWIDENED=15:101949387-101949631;PctSeqSimilarity=0.9926;PctSizeSimilarity=1;PctRecOverlap=0.9455;SizeDiff=0;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=97;MatchId=1941.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:38:0|1:15:2:0:30:./.:1:13:13:1:0/1:9:18:./.:.:.:.:.:.
chr15	102046583	HG3_PB_SVrefine2Falcon1Dovetail_9538	G	GTGAAGGCATGGGGTAGGCTCACCCTGGGTGTGAAGGATGGGGTAGGCTCACCCTGGGTGTGAAGGATGGGGTAGGCTCACTCGGAGTGTGAAGGCATGGGGTAGGCTCACCCTGGATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11369:HG2_PB_assemblyticsfalcon_9307:HG2_PB_SVrefine2Falcon1plusDovetail_4016:HG2_PB_PB10Xdip_10242:HG2_PB_pbsv_15725:HG4_PB_HySA_22891:HG4_PB_pbsv_15633:HG4_PB_SVrefine2PBcRDovetail_7805:HG3_PB_pbsv_15393:HG4_Ill_SVrefine2DISCOVARDovetail_11098:HG4_Ill_GATKHC_24936:HG4_Ill_150bpfermikitraw_19792:HG3_PB_SVrefine2Falcon1Dovetail_9538:HG3_Ill_GATKHC_24879:HG2_Ill_GATKHC_25031:HG2_PB_SVrefine2Falcon2Bionano_7786;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHC_25031:HG3_Ill_GATKHC_24879:HG3_PB_SVrefine2Falcon1Dovetail_9538:HG4_Ill_150bpfermikitraw_19792:HG4_Ill_GATKHC_24936:HG4_Ill_SVrefine2DISCOVARDovetail_11098:HG4_PB_SVrefine2PBcRDovetail_7805;NumExactMatchSVs=7;ClusterMaxShiftDist=0.168067;ClusterMaxSizeDiff=0.168067;ClusterMaxEditDist=0.298387;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=118;DistBack=-27;DistForward=-1;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=268;REFWIDENED=15:102046522-102046789;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1942.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:26:0|1:38:0:1:25:./.:11:1:1:20:0/1:22:7:./.:.:.:.:.:.
chr15	102083100	HG2_PB_pbsv_15726	C	CCCCACCCGAACCCACGCCAAACCCACACTGCTCTAACCCCCGAACCCCCACCGCAACCCCATGGACTGCTTCCCCCCCGAACCCCACCCACCCCAGCACTGCTCTCCCCCCCGAACCCCCACCAATACCCCACACTGCTGCTCCCACCGAACCCCCACCCCCAACCCAGCACTGCCCCCCCGAACCCCACCCAACCCAGCCACGCTCTCCCCCTCAAAACCCCCCACCCAACGCCCAGCACTGCTCTCAAGCCCCGCCCCCACTCTCACCCAGCAACTGCTCTCGCCCCCCGACCCTCCACCCAATGCCCCAGCACTGCTCCTCCCCCGACCCCCACCCAATCTCTCAACTGCTCTCCCCCCGAAGCCCCACCCAACCCACAGACACTGCTTCTCCCCCCCGACCCCCACCCAACCCACAGCACTGGTCCCCCCCGACCCCCCAGCCCACCCCAGCACTGCTCTCCCCCAAACCCCCCACCCAACTCCCAGCCACTGCTCTCTCAGACCCGCTGAATCCCCACCCAAACCCCAGCACTGCATCTCCCCCCGAACCCCACCCTAACCCAGCCACTGCTCTCCCGCCGCCGAACCCCCACCAACCGCAGCACTTGCTCTCGCCCAAACCCCCACCCACCCCAGCACTGGCTTCTCCCGCCGCAGACCCCACCAATCCACCAGCCCACTGCTCTCCCCCCGAACCCCACCCAACCCAGCACTGCTCTCCCCCCGCCGAACCCCACCCAACCCAGCAACTGCTCTCCCCCCCGACCCCACCCAATCCCAGCACTGGCTGCTCCCCCCTGAACCCCATCCCAACCCCAGCACGTGCTCTCACCCCCTCGAACCCCCAACCAACCCCAGCAGCTGCTCTCACCGCTGATCCCCCACCCAACCCAGCACTGCTCTCCCCCGACCCTCCACCCACTCCCCACATGCTCTCGCCGCCGGCTGTTTGGTGTGTGCTGTTCAAACCCTCACACCCCAAGGAGAGCGCTGCCCCCGCTGATTCCCCCACCCACCCCCAGCACTGCTCTCCCCCCCGAACACCCCATCCCCAACCCAGCACTGCTCTCCCCAAACCCGCCCCCACCCAACCTCCAGCACTGCTCTCCCCCGCTGATCCCCAGCTAAGGCCCAACCCCAGCACTGCTCTCCCCCCTGTCCCCCACCCCCCAACCCCAGCACTTGGCTAATCGCCCCCCGAACCCCCACCCAACGCCCACACTGGCTCTCCCCCCCGACCCCCACCCAACCCCAGCACTGGCTCTCCCCCAAACTCCCACCCAACCCACACTGCGCTCCCCCGAACCCCACCCAACCACCAGCACTGGGGCCTCCCCCCGACTCCCCACCACCCCAGCACGGCTCTCGTCCCCCCGAACCCCCACCGCACCGCAGCACCTGCTCTCCCGCCCGACCCCCACCGCAACCCCAGCAACTGCTCTCTCCCGAGTGAATCCCCCCACGAAAACACCCCAGCATGCTCTCCCCGCTGACCCCCCACCAAACCCCAGCAACTGCTCTCACCGCGCTGATCCCACCCAACCCCAGCACTGCTCTCCCCCCCGACCCCCACCCAACCCAGCACTGGCTCTCACCCCCCGCCCCACCCCAACCCCAGCACTGCCTCACCCCACGAACCCCCCACCCAAGCCCCAAGCACTGCTCTCCCCCCGCTGATCCCCACCCAAACCCCAGCACTGCTCTCAACCCCGAACCCCCACCCAACCTCCAGCACTTGTCTCCCCCCCGATCCCCACCCAACTCCCAGCACTGCTCTCGTCCCCCCGACCCCCACACCAAACCCCAGCACTGCTCTCCCCCCACCCGAACCTCCCACCCTAACCCCAGCACTGCTTCTCCCCCCGACCCCCACCCAACCCCAGCACTGCTCTCCCCGCTGTCCCCCCCCAACCTCCAGCATCTGCTCTCCCCCCCGACCCCACCCAACCCCCGCAATGCTCTCCCCCCCGACCACCCAACCCCAGCACTGCTCTCTCCCCCGACCCCCCACCAACCCCAACTGCTCTCCCCCCGACCACCACATCCACCCAGCACCTGCCTCTCCTCTGACCCCCACCCAACCCCAGCCATGCTCTCCCCCGACCCCACCCACCCAGCACTGCTCTCCCCCCGAACCCCACCAATCCCAGCACTGCTTCTCCCCCCGACCCCCCACCCAACCCCAGCAGCTGCTCCCCCTCTGACCCCCACCCAACGGCCCCAGCACTGCTCCCCCCCCCACCCAACCCCAGCACTGCTCTCCCCCCGAACCCCACCCACCCCAGCACTGCTCTCCCCCCCGACCCCCACCCAACGCCCAGCACTCTCCCCCGCGGCCCCTGCCGAACCCCCACCCCACCCCAGCCACTGCTCCTCCTCCCGCGATTCCCCCACCCAAACCCAGCACTGCTCTCCCGCGCCGACCTCCCCACTCCAACACCCCAGACTGCTCTCTCCCCCCGAACCCCACCCCACCCCCAGCACTGTGCTCTCCCCGCCCGGCCGCCCCACCCACCCAGCACTGCCCTCCCCCCGACCCCCACGCCACCCCTAGCACGTGGCTCTCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4017:HG2_PB_pbsv_15726:HG2_PB_HySA_28630:HG2_PB_SVrefine2PBcRplusDovetail_3756:HG2_PB_SVrefine2PB10Xhap12_11370:HG2_PB_SVrefine2Falcon2Bionano_7787:HG2_PB_assemblyticsfalcon_9309:HG3_PB_SVrefine2Falcon1Dovetail_9539;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_15726;NumExactMatchSVs=1;ClusterMaxShiftDist=0.182939;ClusterMaxSizeDiff=0.182939;ClusterMaxEditDist=0.250331;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2572;DistBack=26;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=15:102083039-102083104;PctSeqSimilarity=0.9263;PctSizeSimilarity=0.9705;PctRecOverlap=0.9604;SizeDiff=76;StartDistance=64;EndDistance=64;GTMatch=1;TruScore=95;MatchId=1943.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:112:1/1:0:16:0:24:./.:7:1:9:6:0/0:11:0:0/1:9:28:.:3897:.
chr16	209821	HG2_PB_SVrefine2PB10Xhap12_11373	T	TGGGCACAGGCTGTGAGGGTGCCTGGGACGGCTTGTGGGGCACAGGCTGCAAGAGGTGCCCAGGACGGCTTGTGGGGCACAGGTTGTGAGAGGTGCCCTGGACGGCTTGTGGGGCACAGGCTGTGAGAGGTGCCCAGGACGGCTTGTGGGGCACAGGCTGTGAGGGTGCCCGGGATGGCTTGTGGGGCACAGGTTGTGAGAGGTGCCCGGGACGGCTTGTGGGGCACAGGTTTGAGAGGTGCCCGGGACGGCTTGTGGGGCACAGGTTTGAGAGGTGCCCGGGACGGCTTGTGGGACACAGGTTGTGAGAGGTGCCTGGGACGGCTTGTGGGGCACAGGCTGTGAGGGTGCCTGGGATGGCTTGTGGGGCACAGGTTGTGAGGGTGCCTGGGATGGCTTGTGGGGCACAGGTTGTGAGAGGTGCCCGGGACGGCTTGTGGGGCACAGGTTGTGAGGGTGCCCGGGATGGCTTGTGGGGCACAGGTTGTGAGAGGTGCCCGGGACGGCTTGTGGGGCACAGGTTGTGAGACGTGCCTGGGACGGCTTGTGGGGCACAGGCTGTGAGGGTGCCTGGGATGGCTTGTGGGGCACAGGCTGTGAGGGTGCCCGGGATGGCTTGTGGGGCACAGGTTGTGAGAGGTGCCCGGGACGGCTTGTGGGGCACAGGCTGTGAGAGATGCCCAGGACGGCTTGTGGGGCACAGGCTGTGAGGGTGCCCGGGATGGCTTGTGGGGCACAGGTTGTGAGAGGTGCCCGGGACGGCTTGTGGGGCACAGGTTTGAGAGGTGCCCGGGACGGCTTGTGGGGCACAGGTTTGAGAGGTGCCCGGGATGGCTTGTGGGGCACAGGTTGTGAGAGGTGCCCGGGACGGCTTGTGGGACACAGGTTGTGAGAGGTGCCTGGGACGGCTTGTGGGGCACAGGCTGTGAGGGTGCCTGGGATGGCTTGTGGGGCACAGGTTGTGAGAGGTGCCCGGGATGGCTTGTGGGGCACAGGTTGTGAGAGGTGCCCGGGACGGCTTGTGGGGCACAGGTTGTGAGACGTGCCCGGGACGGCTTGTG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9572:HG3_PB_assemblyticsfalcon_9294:HG4_PB_pbsv_15648:HG3_PB_SVrefine2Falcon1Dovetail_9547:HG2_PB_pbsv_15740:HG2_PB_SVrefine2Falcon1plusDovetail_4022:HG2_PB_SVrefine2PBcRplusDovetail_3762:HG2_PB_SVrefine2PB10Xhap12_11373:HG2_PB_SVrefine2Falcon2Bionano_7790;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7790:HG2_PB_SVrefine2PB10Xhap12_11373:HG2_PB_SVrefine2PBcRplusDovetail_3762;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0199147;ClusterMaxSizeDiff=0.0151947;ClusterMaxEditDist=0.25785;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1060;DistBack=5597;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1059;REFWIDENED=16:209822-210880;PctSeqSimilarity=0.9411;PctSizeSimilarity=0.8613;PctRecOverlap=0.4929;SizeDiff=147;StartDistance=-464;EndDistance=-464;GTMatch=0;TruScore=76;MatchId=1944.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:0:8:1:17:./.:0:5:0:7:./.:0:5:0/1:11:57:.:.:.
chr16	232787	HG3_Ill_GATKHCSBGrefine_10331	G	GTGAAACACCGTCTCTACTAAAAATACAAAAATTAGCCAGGCATAGTGGCGGGCGCCTGTAATCCCAGCTGTTCGGGAGGCTGAGGCAGGACAATCACTTAAACCAGGGAAGCAGAGGTTGCAGTGAGCTGAGATCGAGCCACTGCACTCCAGCCTGGGCGACAGACCGAGACTGTCTCAAAAAAAAGACCGGGCACGGTGGCTCACGCCTGTAATCCCACCACTTTGGGAGGCTGAGGCGGGCTGATCACGATGTCAGGAGATCTAGACCATCCTGGCCAACATGT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9548:HG4_PB_HySA_22905:HG3_PB_HySA_23748:HG4_PB_pbsv_15651:HG3_PB_pbsv_15406:HG2_PB_pbsv_15743:HG2_PB_PB10Xdip_12611:HG2_PB_HySA_28658:HG4_Ill_manta_3668:HG4_Ill_MetaSV_1785:HG4_Ill_GATKHCSBGrefine_10779:HG3_Ill_manta_3517:HG3_Ill_MetaSV_1838:HG3_Ill_GATKHCSBGrefine_10331:HG2_Ill_MetaSV_1731:HG2_PB_HySA_28657:HG4_PB_SVrefine2Falcon1Dovetail_9575:HG2_PB_SVrefine2Falcon2Bionano_7791:HG4_PB_SVrefine2PBcRDovetail_7810:HG3_PB_SVrefine2PBcRDovetail_7424:HG3_Ill_SVrefine2DISCOVARDovetail_11285:HG2_PB_SVrefine2PBcRplusDovetail_3764:HG2_PB_SVrefine2PB10Xhap12_11375:HG2_Ill_SVrefine2DISCOVARplusDovetail_4460:HG2_10X_SVrefine210Xhap12_10890:HG2_PB_SVrefine2Falcon1plusDovetail_4023;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_MetaSV_1731:HG3_Ill_GATKHCSBGrefine_10331:HG3_Ill_MetaSV_1838:HG3_Ill_manta_3517:HG4_Ill_GATKHCSBGrefine_10779:HG4_Ill_MetaSV_1785:HG4_Ill_manta_3668;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0615385;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.197987;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=286;DistBack=-184;DistForward=181;DistMin=-184;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=282;REFWIDENED=16:232690-232971;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1945.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:1:33:0:12:./.:1:2:0:4:1/1:0:12:./.:.:.:.:.:.
chr16	368897	HG3_Ill_250bpfermikitraw_20287	A	AGCCAGGGCCTTGGTGAGAGCGGCTCTGACCCCTGGCTGTGCGGAGAGAATGCG	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_9297:HG2_PB_HySA_28663:HG3_PB_HySA_23756:HG4_Ill_svaba_19518:HG4_Ill_scalpel_14425:HG4_Ill_GATKHC_24951:HG4_Ill_GATKHCSBGrefine_10780:HG4_Ill_150bpfermikitraw_19797:HG3_Ill_svaba_19706:HG3_Ill_scalpel_15083:HG3_Ill_GATKHC_24900:HG3_Ill_GATKHCSBGrefine_10335:HG3_Ill_250bpfermikitraw_20287:HG3_Ill_150bpfermikitraw_19747:HG2_Ill_svaba_19551:HG2_Ill_scalpel_14824:HG2_Ill_SpiralSDKrefine_5822:HG2_Ill_Krunchall_21226:HG2_Ill_GATKHC_25046:HG2_Ill_GATKHCSBGrefine_10417:HG2_Ill_250bpfermikitraw_20881:HG2_Ill_150bpfermikitraw_19700:HG4_PB_HySA_22908:HG4_PB_pbsv_15654:HG4_PB_assemblyticsfalcon_9162;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19700:HG2_Ill_250bpfermikitraw_20881:HG2_Ill_GATKHCSBGrefine_10417:HG2_Ill_GATKHC_25046:HG2_Ill_Krunchall_21226:HG2_Ill_SpiralSDKrefine_5822:HG2_Ill_scalpel_14824:HG2_Ill_svaba_19551:HG3_Ill_150bpfermikitraw_19747:HG3_Ill_250bpfermikitraw_20287:HG3_Ill_GATKHCSBGrefine_10335:HG3_Ill_GATKHC_24900:HG3_Ill_scalpel_15083:HG3_Ill_svaba_19706:HG4_Ill_150bpfermikitraw_19797:HG4_Ill_GATKHCSBGrefine_10780:HG4_Ill_GATKHC_24951:HG4_Ill_scalpel_14425:HG4_Ill_svaba_19518;NumExactMatchSVs=19;ClusterMaxShiftDist=0.165138;ClusterMaxSizeDiff=0.165138;ClusterMaxEditDist=0.275229;PBcalls=6;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=10;DistForward=36;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=205;REFWIDENED=16:368814-369018;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1946.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:22:0|1:35:5:2:17:./.:15:0:2:14:0/1:24:13:./.:.:.:.:.:.
chr16	371553	HG2_PB_SVrefine2Falcon2Bionano_7794	A	ATAAACCTCTCATAGCTGGGAATACGAGGTAGAAGGTGGATTCCAACCCACGAAGGGTTAAACCCTCTCACAGCTGGGAATATGAGGTAGGTGGATTCCAACCCACGAAGGGT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4461:HG2_PB_HySA_28664:HG2_PB_pbsv_15748:HG3_Ill_SVrefine2DISCOVARDovetail_11287:HG2_PB_SVrefine2Falcon2Bionano_7794:HG2_PB_SVrefine2Falcon1plusDovetail_4026;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4461:HG3_Ill_SVrefine2DISCOVARDovetail_11287:HG2_PB_SVrefine2Falcon2Bionano_7794:HG2_PB_SVrefine2Falcon1plusDovetail_4026;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0444444;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.209607;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=112;DistBack=737;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1810;REFWIDENED=16:371554-361695;PctSeqSimilarity=0.9782;PctSizeSimilarity=0.9655;PctRecOverlap=0.2051;SizeDiff=-4;StartDistance=-91;EndDistance=-91;GTMatch=0;TruScore=71;MatchId=1947.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:0|1:33:3:0:26:./.:4:1:2:0:0/0:26:1:./.:.:.:.:.:.
chr16	447657	HG2_PB_SVrefine2Falcon2Bionano_7796	T	TGGGGGTGGGGGTGTGGGGGGGTGAGGGAGTCGGGGGGTGGGGGTGGGGGTGTGGGGGGGTGAGGGAGTCGGGGGGTGGGGGGGGGGGTGAGGGAGCGGGGGGGTGGGGGTGGGGGTGTGGGGGGGTGAGGGAGTCGGGGGTGGGGGGGGGGTGGGGGGGGGGGGGGTGGGGTGGGGGGTGAGGGAGTCGGGGGGTGGGGGTGGGGGTGGGGGGGTGAGGGAGTCGGGGGGTGGGGGGGGGGGGTGGGGGGGTGAGGGAGTCGGGGGTGGGGGTGGGGTGGGGGGTGAGGGAGTCGGGGGGTGGGGGGTGAGGGAGTCGGGGGTGGGGGTGGGGGGGTGAGGGAGTCGGGGGTGGGGGTGGGGGTGGGGGGTGAGGGAGTCGGGGGGTGGGGGTGGGGGGTGGGGGGTGAGGGAGTCGGGGGGGTGGGGGTGGGGGTGGGGGGTGAGGGAGTCGGGGGGTGGGGGGGGGGGTGAGGGAGTCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11381:HG2_PB_pbsv_15751:HG3_PB_pbsv_15415:HG2_PB_PB10Xdip_11898:HG2_PB_PB10Xdip_11897:HG2_PB_SVrefine2Falcon1plusDovetail_4028:HG2_PB_SVrefine2PBcRplusDovetail_3768:HG2_PB_SVrefine2Falcon2Bionano_7796:HG3_PB_SVrefine2PBcRDovetail_7428;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7796;NumExactMatchSVs=1;ClusterMaxShiftDist=0.227567;ClusterMaxSizeDiff=0.216466;ClusterMaxEditDist=0.26457;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=481;DistBack=-87;DistForward=-1;DistMin=-87;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=88;REFWIDENED=16:447658-447745;PctSeqSimilarity=0.9681;PctSizeSimilarity=0.9717;PctRecOverlap=0.8667;SizeDiff=-14;StartDistance=-59;EndDistance=-59;GTMatch=1;TruScore=93;MatchId=1948.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:30:1/1:1:11:0:12:./.:0:1:0:1:./.:0:0:./.:2:10:.:.:.
chr16	483137	HG2_PB_PB10Xdip_11899	C	CATCTCCTGCCTCAGCCTCCCAAGAAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTATATTTTTAGTAGAGACGAAGTTTCACCATGTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACTGTGCCCGGCCTGTCATTTTTATATATTGGGAAAGTTTTGAGTCCTTTCTTCTAGGTATGTTGAAATATACAGGCATGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGTCCGAGGCGGGTGAATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCAGGCATGGTGGTGGGCGCCTGTAGTCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTAGGCGACTGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAGAAATATACAATATATTGTTGTTAAATTTAGTCACCCTACTCTGCTACCAAACATTAGAACTTATCCTTTCTCATTGTAATTTTTTTTTTTTTTGAGATGGGGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCTATCTTGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7815:HG4_PB_pbsv_15658:HG3_PB_pbsv_15416:HG2_PB_pbsv_15752:HG2_Ill_MetaSV_1734:HG4_Ill_GATKHCSBGrefine_10781:HG2_Ill_GATKHCSBGrefine_10418:HG2_PB_HySA_28674:HG4_PB_HySA_22912:HG2_PB_PB10Xdip_11900:HG2_PB_PB10Xdip_11899:HG3_Ill_MetaSV_1841:HG4_Ill_MetaSV_1788:HG3_PB_SVrefine2PBcRDovetail_7429:HG3_PB_SVrefine2Falcon1Dovetail_9553:HG2_PB_SVrefine2PBcRplusDovetail_3769:HG2_PB_SVrefine2PB10Xhap12_11382:HG2_PB_SVrefine2Falcon2Bionano_7797:HG4_PB_SVrefine2Falcon1Dovetail_9581:HG2_10X_SVrefine210Xhap12_10895:HG4_Ill_SVrefine2DISCOVARDovetail_11103:HG2_Ill_SVrefine2DISCOVARplusDovetail_4462:HG2_PB_SVrefine2Falcon1plusDovetail_4029;NumClusterSVs=23;ExactMatchIDs=HG2_PB_PB10Xdip_11899:HG2_PB_PB10Xdip_11900;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0962567;ClusterMaxSizeDiff=0.038848;ClusterMaxEditDist=0.210101;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=732;DistBack=-179;DistForward=17205;DistMin=-179;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4547;REFWIDENED=16:483038-473401;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9973;PctRecOverlap=0.9973;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1949.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:79:1/1:0:15:0:10:./.:1:5:1:6:1/1:1:18:1/1:5:109:.:.:.
chr16	508405	HG4_PB_pbsv_15660	C	CCCCTCGGGTTCACCCGATGCCCACAGGGCCTGGGGGGCCTTCTCGGGTTTCACCGATGCCATAGGGCCTGGGGGGCCTTCCTCGGGTTCACCGATGCCCACAGGGCCTGGGGGGCCTTCCCTCGGGTTCACCGATGCCCCACAGGGCCCCGGGGGCCTTCCTCGGGTTCACCCGATGCCCAGGGCATGGGGGGCCTTCTCCGGGTTCACCGATGCCCACAGGGCCTGGGGGGCCTTCCTCGGGTTTCACCGATGGTGCCCAAGGGCCTGGGGGGCCCTTTCCTCGGTTCAGTGTGCTCACAGGGCCTGAGGGGGCCTTCCTCGGGTTCACGATGCTCACAGGGCCTGGGGCCCTTCCTGGGTTCAGTGATGCTCACAGGGCCTGGGGGGCCTTCTCGGTCACCGCTGCCCACAGGGCCTGGGGGGGGCCTTCCTCGGGTTCACCGATGCCACAAGGGCCCTGGGGGGGCCCTTCCTCGGGTTTCCACCGATGCCCACAGGGCCTGGGGGGCCTTCCTCGGTTCCCCGATGCCCACAGGGGCCTGGGGGGCCTTACCTCGGGTTCACCGATGCCCACAGGGCCTGGGGGGCCTTCCTCGGGTTCAACCGATGCCCACAGGCCTGGGGGGCCTTCCTCGGGGTTCACCGATGGGCCAGGGCCTGGGGGCCTTCCTCGGGTTCACCGATGCCCACCAGGGGCCTGGGGGCCTTCCTGCGGGTTCACCGATGCCCACAGGGCGCTGGGGGGCCTTCCCTCGGGTTCACCGATGCCCAAGCAGGGCTGGGGGGCCTTCCTCGGGTTCACCGATGCCACAGGGCCTGGGGGCCTTCTCGGGTTCAACCCGATGCCACAGGCCTGGGGGGCCTTCTCGGGTTCACCGATGCCCACAGGGCCTGGGGGGCCTCCTCCGGGTTTCCACCGATGCCCACAGGGCCTGGGGGGCCTTCCTCGGGTTCACCGATGCCCACGGGCCTGGGGGCCTTCTCTCGGGTTCACCGATGCCGCACAGGGCCTGGGGGGGCCTTCTCGGGTTCACCCGAGCCAAGGGCCTGGGGGGCCTTCCTACAGGGTTCACCATGCCCACAGGGGCTTGGGGGCATTCCTCGGGTTCACCGATGCCCACAGGGGCCTGGGGGGCCTTCCTCGGGTTCACCGATGCCCACAGGCCTGGGGGCCTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3771:HG2_PB_pbsv_15754:HG4_PB_pbsv_15660:HG3_PB_SVrefine2Falcon1Dovetail_9556:HG4_PB_SVrefine2PBcRDovetail_7817:HG3_PB_SVrefine2Falcon1Dovetail_9555:HG2_PB_SVrefine2Falcon1plusDovetail_4031;NumClusterSVs=7;ExactMatchIDs=HG4_PB_pbsv_15660;NumExactMatchSVs=1;ClusterMaxShiftDist=0.103038;ClusterMaxSizeDiff=0.103038;ClusterMaxEditDist=0.165566;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1178;DistBack=-212;DistForward=28;DistMin=-212;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=234;REFWIDENED=16:508384-508617;PctSeqSimilarity=0.9618;PctSizeSimilarity=0.9932;PctRecOverlap=0.8278;SizeDiff=8;StartDistance=-199;EndDistance=-199;GTMatch=0;TruScore=92;MatchId=1950.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:50:0|1:30:5:0:32:0/0:5:0:13:0:0/0:42:0:0/1:36:18:.:5995:.
chr16	545051	HG2_PB_pbsv_15760	C	CAGGTGGAGGATCACATTGAGACCGGAGGTCGAGGCTGCAGAGGTGGCGCAGAGATACATGAGCCCGGGGACGGTCCAGAGGGCTGCAGAGTGGAGCATCACAGTGGCCGGCCGAGAGTCGAGGCTGCAGACGACGCTGGGAGGGAATCACATGGCCCGGGGACCAGGTCGACTGCAGAGGGTGGGAGATCACATGAGCCGGGAGAGGCTCTCGAGGCTGCAGACTGGTGGGAGGATCACATGAGCCGGGCACTGACCGTACCGAGCTGCAGAGGTGGGAGGTATCACAATGAGCCGGGGATCGGTCCAGGCTGCAGAGGTGGGAGGATCACATGAGCCGGGGAGTGTCCCAGGCTTGCAGAGGTAGGGGAGATCTCACATGAGCCGGGGAGGTCCGAGGCTGCAGAGGTGGGCAGGATCACTATGAGCCGGGGAGTCGAGCATGCCAGAGCGTGGAGGATCACATGAGCCGGGAGATCGAGCTGCAGAGGTGGGAGGATCACATGAGCCGCGGGAGGTCGCAGCTGCAGAGGTGGGAGGATCACATGAAGCCGGGCGAGGTCGACGGCTGCCAGAAGGTGGGAGATGATCACATTGATCCTGGGAGGTCGAGGCTGCCAGGGTGGGAGGATCACATTGAGCCGGGGTCCGAGGTCCGAGGCTGCTTGAGGTGGGAGGATCCACATCAGCCGGGGGGAGGTCGGGCTGCAGAGTGGGGAGGATCACATTGAGCGGGGAGGTCCTGACGGCTGCTGGAGGTGGAAGGATCAATGGCCAGGGCGCGAGGTCGAGGCTGCGAGGGTGAGGATTCACATGACGCCCGGGACGAGCGTCGAGGCTAGCCAGAGGTGGAGAGATCACTATGAGCCGGGGATGGTCGAGGCTGGAGAGTGGGAGGATCACATTGAGCGCGGGGAGTCGAGTGCATGCCAGAGGTGGAGAGTACATGATCCTGAGTGAGGTCGAGGCTGCCAGAGTAGGGAGATCCACATGAGCCGGGCGGAGGTCGAGGCGCTGCGAGTGGCCAGCATCACATGAAGCCGGGAATGAGGTCGAAGGCTGCTGAGGTGGGAGGCATCCCACATGAGCCGCCGGGTCGAGGCTGCAAGGTGGGAGGATCACATGAGCCGGGGGAGGTCGAGGCTGCAGAGGTCGGAGATCACATGAGCACTGAGAGTCGAGGCTGCTGAGGTGTTGAGAATCAACATAAGCCGGGGAGTCGAGCTGCAGATGGTGGGAGGCATCACATAGCCGGGAGGCGAGGCTGCAGAGGTGGAGGATCCATGTAGCCGGGAGTCGAGGCTGCAGAGGTGGGAGGATCACATGGCCTGCCGAGGTCGAGGCTCTGAAGGTGGGAGGATCACATGATCCGGGAGGTCGAAGGCTGCAGAGGTGGGGAGGATCACCATGAGCCGGGGAGGTTCGAGGCTGCAGAGGCTGGGAGGATCACATGATTTTCCTGGGAGGTCGGAGGCTGCAGAGGGTGGGAGGAATCACATGAGCGGGTGAGGAGGATCGAGGCTGCAGGGTGGGAGGATCACATGAGCCGGGAAGAGGTCGAGGGCTGTGAGGTGGGAGGATCCATGAGCCGGGGAGGTCGAGGCTTGCAGAGGTGGAGGATCACATGAGCCGGGGAGGTCGAGGCTGCAGAGGTGGAGGATCACATGAGCCTGGGAGTCGAGGCTGCTGAGGTGGGCAGGCATCACATGAGCCGGGACTGAGGTCAGACTGCAGAGGTGGAGGATCACATTGAGCCGGGGAGGTCGAGGCTGCAGATGGGAAGGATCACATGAGCCGGGGAGCAGAGGTTCAGAGGTGGAGGATCACATGAGCCGGTGAGCGTCGGAGCTGCTGAGGTGGGAGATCAATTGAGCAGGGGAGGTCGAGGCATGCAGAGGTGGGAGGATCACATAGCCGGGGAGGTCGAGCTGTCAGAGGTGGAGGATCACATTGATCTGGGAGGTCGAGAGCTGCTGAGGTGGGAGGAATCACATGAGCGGGTGAGGTCGAGGCTGACAGACAGGTGGGGAGGATCACATGAGCCGGGAGGTCAGGCTGACAGAGGTGGGAGGATTCACATGAGCCGGCCGAGGTCGAGGCCTGCAGATTGGTGGGGGATCACTATGAGCAGGGATGGTAAGAGGCTGCAGAGGTGGGAGGATCACATGACCCCGGGGGAGGTCAGAGGCTGCACGAAGTGGGAGGATCACCATGAGCTGGGAGGTCGAGGCTGCTGAGGTGGGAGGATCACATGAGCCGGGAGGTCGAGCTTGCTGAGCTCGCTGAGGATCACATAGCCTGGGGCAGAGGTCGAGGCTGCAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9564:HG2_PB_HySA_28680:HG2_PB_pbsv_15760:HG2_PB_SVrefine2PB10Xhap12_11388:HG4_PB_pbsv_15665:HG2_PB_SVrefine2PBcRplusDovetail_3775:HG2_PB_SVrefine2Falcon2Bionano_7800:HG4_PB_SVrefine2Falcon1Dovetail_9589;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_15760;NumExactMatchSVs=1;ClusterMaxShiftDist=0.255399;ClusterMaxSizeDiff=0.255399;ClusterMaxEditDist=0.281137;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=2321;DistBack=-12688;DistForward=-1;DistMin=-12688;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=289;REFWIDENED=16:544763-545051;PctSeqSimilarity=0.9343;PctSizeSimilarity=0.9539;PctRecOverlap=0.9543;SizeDiff=107;StartDistance=37;EndDistance=37;GTMatch=1;TruScore=94;MatchId=1951.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:79:1/1:2:13:2:18:0/0:7:0:8:0:0/0:23:0:0/1:29:57:.:5995:.
chr16	557738	HG2_PB_SVrefine2PB10Xhap12_11389	C	CACGTTTCCCGTTTTCAGTATCATCTGCCCGTTCTGAGCCATTTGCTCTCTAGCCCTACCATACAGCTGTCATCCTAAGAGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11389:HG2_PB_pbsv_15763:HG2_PB_PB10Xdip_12053:HG4_PB_pbsv_15666:HG2_PB_SVrefine2PBcRplusDovetail_3777;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11389:HG2_PB_SVrefine2PBcRplusDovetail_3777;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.305882;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=81;DistBack=2935;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=238;REFWIDENED=16:557739-557976;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1952.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:23:0|1:17:3:2:16:./.:3:0:5:0:0/1:22:4:./.:.:.:.:.:.
chr16	594888	HG2_PB_SVrefine2Falcon2Bionano_7803	C	TCCCCCACGTCGCCGTCTCCCCCACGTCGCCGTCTCCCCACGTCGCCGTCTCCCCACGTCGCCGTCTCCCCCACGTCGCCTCCCCCACGTCGTCGCCTCCCCCACGTCGCCTCCCCCACGTCGTCGCCTCCCCACGTCGTCGCCTCCCCCACGTCGCCTCCCCACGTCGCCTCCCCCACGTCGCCTCCCCACGTCGCCTCCCCTCACGTCGCCTCCCCCACGTCGTCGCCTCCCCCACGTCGTCGCCTCCCCCACGTCGCTCCCCCACGTCGCCTCCCCCACGTCGTCGTCTCCCCGTCGCCTCCCCCACGTCGCCTCCCCCACGTCGCCTCCCCTCACGTCGTCGTCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9569:HG2_PB_pbsv_15765:HG2_PB_SVrefine2Falcon2Bionano_7803:HG3_PB_pbsv_15426:HG4_PB_SVrefine2Falcon1Dovetail_9594:HG2_PB_SVrefine2PB10Xhap12_11391:HG2_PB_SVrefine2PBcRplusDovetail_3779:HG2_PB_SVrefine2Falcon1plusDovetail_4035;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7803;NumExactMatchSVs=1;ClusterMaxShiftDist=0.108417;ClusterMaxSizeDiff=0.0998573;ClusterMaxEditDist=0.248963;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=348;DistBack=-5659;DistForward=33;DistMin=-5659;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=224;REFWIDENED=16:594694-594917;PctSeqSimilarity=0.9752;PctSizeSimilarity=0.9613;PctRecOverlap=0.6832;SizeDiff=-14;StartDistance=108;EndDistance=108;GTMatch=0;TruScore=87;MatchId=1953.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:68:1/1:1:12:1:15:./.:4:2:2:5:./.:2:0:./.:2:15:.:.:.
chr16	600546	HG3_PB_SVrefine2PBcRDovetail_7433	A	AGGCCCCGGTCAGTGAGGGCCCCGCTCAGCCATGCCCCCAGTCGGTGAGGGCCCCACTCAGCCATGCCCCTGGTTAGTGAGACCCCCTGTCAGTGAGGGTTCCCTGTCGGTGAGGGTCCCCGGTCGGTGAGGGCCCCCAGTCGGTGAGGGTCCCGGTCGGTGAGGGTCCCCTGTCGGTGAGGGTCCCCGTCGGTGAGGGTCCCGGTCGGTGAGGGTCCCCTGCCGGTGAGGGTCCCCGGTCGGTGAGGGCGCCCCGTCAGTGAGGGTCCCGGTCAGTGAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11392:HG2_Ill_breakscan11_4657:HG3_PB_pbsv_15428:HG2_PB_PB10Xdip_12057:HG2_PB_HySA_28689:HG2_PB_SVrefine2Falcon2Bionano_7804:HG2_PB_SVrefine2Falcon1plusDovetail_4036:HG4_PB_SVrefine2Falcon1Dovetail_9595:HG3_PB_SVrefine2PBcRDovetail_7433:HG2_PB_SVrefine2PBcRplusDovetail_3780;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11392:HG3_PB_SVrefine2PBcRDovetail_7433:HG2_PB_SVrefine2PBcRplusDovetail_3780;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0396396;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.284685;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=279;DistBack=5623;DistForward=80;DistMin=80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=741;REFWIDENED=16:600547-601287;PctSeqSimilarity=0.9662;PctSizeSimilarity=0.9964;PctRecOverlap=0.2064;SizeDiff=-1;StartDistance=-222;EndDistance=-222;GTMatch=0;TruScore=72;MatchId=1954.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:46:1/1:1:8:2:17:./.:0:2:0:1:./.:0:2:./.:.:.:.:.:.
chr16	603067	HG4_PB_pbsv_15673	C	CCCTGCACAAGGTGCCCCCTCCCTAACCCCGCTGCAGCCCGACACCCAACTCGTGCCCCCCACCCCTGCCACAGGTGCCCCTCCCCTACCCGCTGCACCCAAACACAAACTCGTGCCCCCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7805:HG4_PB_pbsv_15673:HG2_PB_HySA_28690:HG3_PB_SVrefine2Falcon1Dovetail_9571:HG2_PB_pbsv_15767;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_15673;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0991736;ClusterMaxSizeDiff=0.0826446;ClusterMaxEditDist=0.258065;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=121;DistBack=6;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=144;REFWIDENED=16:603060-603203;PctSeqSimilarity=0.9438;PctSizeSimilarity=0.9918;PctRecOverlap=0.9024;SizeDiff=-1;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=94;MatchId=1955.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:29:./.:9:11:10:12:0/0:6:0:5:0:0/0:11:0:./.:.:.:.:.:.
chr16	746678	HG2_PB_SVrefine2PBcRplusDovetail_3789	T	TCCCACCCCAAAGCCACCATCCGCTCCCACCTCCATAGGGTTGCTGCTGCCCGCCCCTGCCCCCCAGCCCTGTCCCCCCCACCACCCAGCCTGGGCGCACACCCCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9578:HG2_PB_assemblyticsfalcon_9343:HG3_PB_pbsv_15439:HG4_PB_HySA_22926:HG2_PB_SVrefine2Falcon1plusDovetail_4042:HG2_PB_PB10Xdip_12103:HG2_PB_PB10Xdip_12102:HG4_PB_pbsv_15686:HG2_PB_pbsv_15780:HG2_10X_SVrefine210Xhap12_10903:HG4_PB_SVrefine2PBcRDovetail_7827:HG3_PB_HySA_23786:HG2_PB_SVrefine2PBcRplusDovetail_3789:HG2_PB_SVrefine2PB10Xhap12_11398:HG2_PB_SVrefine2Falcon2Bionano_7814:HG4_PB_SVrefine2Falcon1Dovetail_9603:HG3_PB_SVrefine2PBcRDovetail_7443;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7814:HG2_PB_SVrefine2PB10Xhap12_11398:HG2_PB_SVrefine2PBcRplusDovetail_3789:HG3_PB_HySA_23786:HG4_PB_SVrefine2PBcRDovetail_7827;NumExactMatchSVs=5;ClusterMaxShiftDist=0.076555;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.215962;PBcalls=16;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=105;DistBack=16688;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=79;REFWIDENED=16:746679-746757;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1958.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:38:1/1:0:15:2:10:./.:2:2:0:4:0/1:15:5:./.:.:.:.:.:.
chr16	810501	HG3_Ill_GATKHC_24915	A	AAGCCATGAAACCTGGGCCCGGGCTCCCACTCACACCCCACCCCCACCCAGGGCAGCCGTGAAACCTGGGCCCTGGGCTCCCACCCACGCCCCACACCCACCCAGGGC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10905:HG4_Ill_SVrefine2DISCOVARDovetail_11113:HG2_Ill_SVrefine2DISCOVARplusDovetail_4468:HG2_PB_SVrefine2PB10Xhap12_11401:HG4_PB_pbsv_15687:HG3_PB_SVrefine2PBcRDovetail_7445:HG2_PB_pbsv_15782:HG3_PB_HySA_23790:HG4_PB_SVrefine2PBcRDovetail_7828:HG3_Ill_SVrefine2DISCOVARDovetail_11297:HG2_10X_SVrefine210Xhap12_10906:HG4_PB_assemblyticsfalcon_9192:HG4_PB_SVrefine2Falcon1Dovetail_9605:HG4_Ill_GATKHC_24969:HG4_Ill_GATKHCSBGrefine_10784:HG2_Ill_GATKHCSBGrefine_10423:HG2_PB_HySA_28699:HG3_Ill_scalpel_15092:HG3_Ill_GATKHC_24915:HG3_Ill_GATKHCSBGrefine_10343:HG2_Ill_scalpel_14833:HG2_Ill_manta_4317:HG2_Ill_GATKHC_25060:HG2_PB_PB10Xdip_12108:HG2_PB_PB10Xdip_12107:HG4_PB_HySA_22927:HG4_Ill_scalpel_14432:HG3_Ill_250bpfermikitraw_20302:HG2_PB_SVrefine2Falcon2Bionano_7815:HG3_PB_SVrefine2Falcon1Dovetail_9580:HG2_PB_SVrefine2PBcRplusDovetail_3791:HG2_PB_SVrefine2PB10Xhap12_11400:HG2_PB_SVrefine2Falcon1plusDovetail_4043;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_GATKHC_25060:HG2_Ill_manta_4317:HG2_Ill_scalpel_14833:HG3_Ill_GATKHCSBGrefine_10343:HG3_Ill_GATKHC_24915:HG3_Ill_scalpel_15092;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0744186;ClusterMaxSizeDiff=0.027907;ClusterMaxEditDist=0.321101;PBcalls=17;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=107;DistBack=20;DistForward=88;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=141;REFWIDENED=16:810451-810591;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9907;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1959.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:1:26:0:18:./.:2:16:2:14:./.:2:19:./.:.:.:.:.:.
chr16	813775	HG2_PB_PB10Xdip_12109	A	GCATCCCATCCCCCGTCCCCTCCCCCACACCCCTCCCCCACCCCCATGTCCCCTCCCCACCCCTCCCCCACACCCTCCCCCACCCCTCCCCATGTCCCCTCCCCTACCTCCTCCCCCCGCTCCCCTCCCCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7816:HG4_PB_assemblyticsfalcon_9193:HG4_PB_SVrefine2Falcon1Dovetail_9606:HG2_PB_SVrefine2Falcon1plusDovetail_4044:HG2_PB_pbsv_15783:HG3_PB_HySA_23791:HG2_PB_PB10Xdip_12110:HG2_PB_PB10Xdip_12109:HG2_PB_HySA_28700:HG2_Ill_manta_4318:HG3_Ill_MetaSV_1844:HG3_PB_SVrefine2Falcon1Dovetail_9581:HG3_PB_SVrefine2PBcRDovetail_7446:HG4_PB_pbsv_15688:HG4_PB_HySA_22928:HG2_PB_SVrefine2PB10Xhap12_11402:HG3_Ill_SVrefine2DISCOVARDovetail_11298:HG2_PB_SVrefine2PBcRplusDovetail_3792:HG4_Ill_SVrefine2DISCOVARDovetail_11114:HG2_10X_SVrefine210Xhap12_10907:HG4_PB_SVrefine2PBcRDovetail_7829;NumClusterSVs=21;ExactMatchIDs=HG2_PB_PB10Xdip_12109:HG2_PB_PB10Xdip_12110;NumExactMatchSVs=2;ClusterMaxShiftDist=0.116279;ClusterMaxSizeDiff=0.0926641;ClusterMaxEditDist=0.242424;PBcalls=16;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=131;DistBack=-1;DistForward=5;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5161;REFWIDENED=16:823452-813774;PctSeqSimilarity=0.9887;PctSizeSimilarity=0.985;PctRecOverlap=0.985;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1960.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:2:24:2:22:./.:3:12:1:16:./.:2:26:./.:.:.:.:.:.
chr16	868708	HG2_PB_SVrefine2PB10Xhap12_11408	A	ATGGTGGTGAAGACTGTAGTGATGGTGATGATGACGGTGAACTGTAGTGATGGTGATGATGATGGTGAAGACTGTAGTGATGGTGATGATGGTGAAGACTGTAGTGATGATGGTGAAGACTAGTGATGGTGATGATGGTGAAGACTAGTGATGGTGATGATGGTGAAGACTGTAGTGATGGTGATGATGGTGAAGACTGTAGTGATGATGGTGGTGAAGACTGTAGTGATGTTGATATTGGTGATGAAGACTATAGTGATAGTGAAGACTATCGTGATGGTGATGATGATGGTGAAGACTAGTGATGGTGATGATGATGGTGAAGACTGTAGTGATGGTGATGATGGTGAAGACTGTAGCGATGATGGTGAACACTGTAGTGATGTTGATATTGGTGATGAAGACTATAGTGATGGTGATGATAGTGAAGACTATCGTGATGGTGATGATGATGGTGAAGACTGTAGTGATGGTGATGATGGTGAAGACTATCGTGATGGTGATGATAATGGTGAAGACTATAGTGATGTTGATGTCGGTGGTGAAGACTGTAGTGATGGTGATGATAGTGAAGACTATCGTGATGGTGATGATGATGGTGAAGACTGTAGTGATGGTGATGATGGTGAAGACTATCGTGATGGTGATGATGATGGTGAAGACTATAGTGATGATGGTGAAGACTGTAGTGATGGTGATGATAGTGGTGAAGACTGTAGTGATGTTAATGGTGAAGGCTATAGTGATGTTGATGGTGGTGAAGACTGTAGCAATGGTTATGATGTTGGTGAAGACAATAGTGATGGTGATGATGGTGAAGACTATAGTGATGGTGATGATGGTGGTGAAGACTGTAGTGATGGTGATGATAGTGGTGAGGACTGTAGTGATGATAGTGGTGAAGACTGTAGTGATGATGATGGTGAAGACTATAATGATGATGGTGAAGACCGCCGTGATGGTGATGATGGTGAAGACTGTAGCAATGATGATGGTGAAGACTATAGTGATGTTGATGTTGGTGGTGAAGACTGTAGCGATGGTGATGATGATGGTGAAGACTATAGTGATGATGATGGTGAAGACTATAGTGATGATGATGGTGAAGACCGCCGTGATGGTGATGATGGTGAAGACTGTAGCGATGATGATGGTGAAGACTATAGTGATGCTGATGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11408:HG2_PB_pbsv_15789:HG4_PB_HySA_22929:HG3_PB_HySA_23799:HG3_PB_pbsv_15445:HG4_PB_SVrefine2Falcon1Dovetail_9610:HG2_PB_HySA_28702:HG2_PB_SVrefine2Falcon2Bionano_7820:HG3_PB_SVrefine2PBcRDovetail_7449:HG3_Ill_SVrefine2DISCOVARDovetail_11299:HG2_Ill_SVrefine2DISCOVARplusDovetail_4470:HG3_PB_SVrefine2Falcon1Dovetail_9584:HG2_PB_SVrefine2Falcon1plusDovetail_4050:HG4_PB_SVrefine2PBcRDovetail_7832:HG4_Ill_SVrefine2DISCOVARDovetail_11116:HG2_PB_SVrefine2PBcRplusDovetail_3797;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11408:HG4_PB_SVrefine2PBcRDovetail_7832:HG4_Ill_SVrefine2DISCOVARDovetail_11116:HG2_PB_SVrefine2PBcRplusDovetail_3797;NumExactMatchSVs=4;ClusterMaxShiftDist=0.176066;ClusterMaxSizeDiff=0.174989;ClusterMaxEditDist=0.317816;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=1177;DistBack=20474;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=239;REFWIDENED=16:868709-868947;PctSeqSimilarity=0.9884;PctSizeSimilarity=0.9975;PctRecOverlap=0.8637;SizeDiff=-3;StartDistance=-159;EndDistance=-159;GTMatch=1;TruScore=94;MatchId=1961.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:91:1/1:1:20:0:36:1/1:7:150:3:84:./.:0:6:./.:12:199:.:12567:.
chr16	936545	HG2_PB_PB10Xdip_12161	A	ATTCCCCAGGCCCCTCCCACCCTAGGCCCCCGGCGTTCCCCAGGCCCCTCCCACCCTAGGCCCCCGGCGTTCCCCAGGCCCCTCCCACCCTAGGCCCCCGGCGTTCCCCAGGCCCCTCCCACCCTAGCCCCCGGCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4058:HG4_PB_assemblyticsfalcon_9210:HG2_PB_pbsv_15795:HG4_PB_SVrefine2Falcon1Dovetail_9619:HG4_PB_pbsv_15701:HG3_PB_HySA_23819:HG3_PB_pbsv_15450:HG2_PB_SVrefine2PBcRplusDovetail_3802:HG2_PB_PB10Xdip_12162:HG2_PB_PB10Xdip_12161:HG2_PB_HySA_28727:HG3_PB_SVrefine2Falcon1Dovetail_9592:HG2_PB_SVrefine2PB10Xhap12_11414:HG2_PB_SVrefine2Falcon2Bionano_7825;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_12161:HG2_PB_PB10Xdip_12162;NumExactMatchSVs=2;ClusterMaxShiftDist=0.161172;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.340426;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=135;DistBack=29;DistForward=56;DistMin=29;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=382;REFWIDENED=16:936516-936897;PctSeqSimilarity=0.9963;PctSizeSimilarity=0.9926;PctRecOverlap=0.9854;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1962.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:0:8:0:13:./.:0:0:0:0:./.:0:0:./.:.:.:.:12567:.
chr16	943983	HG2_PB_SVrefine2PB10Xhap12_11416	A	ACCTGTCCACCCCACTGTCCACCCACCCGTCCCCCTGTCCACCGGGCCGTCTGCCCACTCGTCCCCTGTCCACCAGACCATCCGCCCACCCGTCCCCCTGTCCACCGGGCCGTCCGCCCACCCATGCCCCTGTCCACCGGACCGTCTGCCCACCCGTCCCCTGTCCACCGGACCGTCCGCCCACCCGTCCCCCTGTCCACTGGACTGTCCGCCCACCCGTCCCCCTGTCCACTGGACTGTCCGCCCACCCGTCCCCCTGTCCACTGGACTATCCGCCCACCCGTCCCCTGTCCACCGGACCGTCCGCCCACCCGTCCCCATGTCCATCAGACCGTCCGTCCACCTGTCCCCCTGTCCCCTGTCCACCGGACCATTCGCCCACCCATCCCCCTGTCCACCTGGCCATCCGCCCACCTGTCTCCTGTCCACCGGACCGTCCACCCACCCGTCCCCCTGTCCACTGGACTGTCCGCCCACCTGTCCCCCTGTCCCCTGTCCACCGGACTGTCTGCCCACCCGTCCCCCTGTCCACCTGGCCATCCGCCCACCCATCCCCTGTCCACCGGACCGTCCACCCACCCGTCCCCCTGTCCAGCAGAACGTCCACCCACCCGTCCCCCTGTCCACTGGACTGTCCGCCCACCTGTCCCCCTGTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11415:HG3_PB_HySA_23821:HG2_PB_HySA_28730:HG4_PB_SVrefine2PBcRDovetail_7837:HG4_PB_pbsv_15702:HG3_PB_SVrefine2PBcRDovetail_7453:HG4_PB_SVrefine2Falcon1Dovetail_9620:HG2_PB_SVrefine2PBcRplusDovetail_3803:HG2_PB_SVrefine2PB10Xhap12_11416:HG2_PB_SVrefine2Falcon2Bionano_7826:HG3_PB_SVrefine2Falcon1Dovetail_9594:HG2_PB_SVrefine2Falcon1plusDovetail_4059:HG3_PB_SVrefine2Falcon1Dovetail_9593;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11416:HG2_PB_SVrefine2PBcRplusDovetail_3803;NumExactMatchSVs=2;ClusterMaxShiftDist=0.294314;ClusterMaxSizeDiff=0.294314;ClusterMaxEditDist=0.369565;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=656;DistBack=-20506;DistForward=145;DistMin=-20506;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=255;REFWIDENED=16:943984-944238;PctSeqSimilarity=0.9805;PctSizeSimilarity=0.9985;PctRecOverlap=0.6317;SizeDiff=-1;StartDistance=-242;EndDistance=-242;GTMatch=1;TruScore=87;MatchId=1963.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:37:1/1:1:18:2:7:./.:0:3:0:6:./.:0:0:1/1:2:30:.:12567:.
chr16	964488	HG2_PB_SVrefine2Falcon1plusDovetail_4061	A	AGACACGCTCCCTCCCTCCCTTCCATGACCATTGGTGACACACTCCCTCTCCTTCCCATGACCACTGGTGACACACTCCCTCTTTCCCTCCCTTCCCATGACCACTGGTGACACACTCCCTCCCTCCCATGACCATTGGTGACACACTCCCTCCCTCCTTCCCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCCATGACCATTGGTGACACACTCCCTTCCTCCTTTCCATGACCACTGGTGACACACTCCCTCCCTCCTTCCCATGACCATTGGTAACACACTCCCTCCCTCCTTCCCATGACCACTGGTGACACACTCCCTCCCTCCCTTCCCATGACCATTGGTGACACCCTCCCTCCTTCCCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCGACTATTGGTGACACACTCCCTCCCTCCTTCCCATGACCATTGGTGACACACTCCCTCCCTCCCCATATGACCATTGGTGACACATTCCCTCTCCTCACCTCATGACTATTGGTTGACACACTCCCTCCCTCCCATGACTATTGGTGACACACTCCCTCCTCCCCATGACCATTGGTGACACATTCCCTCCCTCCCTCCTCATGACTATGGTGACACACTCCCTCCCTCCCTCCCCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCTTCCCATGACCATTGGTGACACACTCCTTCCCTCCCTCCCCATGACCATTGGTGACACACTCCCTCCCTCCCCCCCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCTTCCCATGACCATTGGTAACACACTCCCTCCCTCCCTTCCCATGACCATTGGTGACACACTCCCTCCCTCCCCCCCATGACTATCAGTGACACACTCCCTCCCTCCCTCATGACCATTGGTGACACACTCCCTCCCTCCTGATGACCATTGGTGACACACTACCTCCCTCCCTCCCCATGACCATTGGTGAAACATTCCCTCCCTCCCTCCCTCCCAATGACTATTGGTGACACACTCCCTCCCTCCCTCCCTCCTCATGACCATTGGTGACACGATCCCTCCCTCCCTCCCTTCCCGTGACCATTGGTGACACACTCCGTCCCTCCTTTCCCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCCATGACTATTGGTGACACACTCCCTCCCTCCCTCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCCATGACTTGGTGACACACTCCCTCCCTCCCTCCTCATGACGATTGGTGACACACTACCTCCCTCCTTCCTCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCTTCCCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCTCCCCATGACTATCGGTGACACACTCCCTCCCTCCCCATGACTATCGGTGACACACTCCCTCCCTCCTCATGACCATTGGTGACACAATCCCTCCCTCCCCATGACTATCGGTGACACACTCCCTCCCTCCTCATGACCATTGGTGACACACTCCCTCCCTCCTCCCCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCCATGACCATTGGTGACACACTCCCTTCCTCCCTTCCTATGACCATTGGTGACACACTCCCTCCCTCCCTTCCCATGACCATTGGTGACACAATCCCTCCCTCCCTTCCCACGACCATTGGTGACACAATCCCTCCCTCCCTTCCCATGACCATTGGTGACACACTCCCTCCCTCCCTTCACATGACCATTGGTGACACACTCCCTCCCTCCCTTCCCATGACCACTGGTGACACACTCCCTCCGTTCCTCCCCATGACCATTGGTGACACACTCCCTCCCTCCCCATGACTATTGGTAACACACTCCCTCCATCCCTCCCATGACTATTGATGACACTCTCCCTCCCTCCTTCCCTCCTCATAACCATTGGTGACACACTCCCTCCCTCCCTCCCAATGACTATTGGTGACACACTCCCTCCCTCCCTCCCCATGACTATTGGTGACACACTCCCTCCCTTCCTCATGACCATTGGTGACACACTCCCTCCCTCCCCATGACTACTGGTGACACACTCCCTCCCTCCCTCTTCATGACCATTGGTGACACACTCCCTCCCTCCCTCCCCATGACCATTGGTGACACACTCCCTCCCTCCTCATGAGCATTGGTGACACACTCCCTCCCTCCCATGACCATTGGTGACACACTCCCTCCCTCCCTCCTCATGACCATTGGTGGCACACTCCCTCCCTCCTTATGACCATTGGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11420:HG3_PB_pbsv_15453:HG2_PB_pbsv_15800:HG3_PB_HySA_23824:HG2_PB_HySA_28736:HG2_PB_PB10Xdip_12176:HG2_PB_PB10Xdip_12175:HG4_PB_SVrefine2Falcon1Dovetail_9622:HG2_PB_SVrefine2Falcon1plusDovetail_4061:HG3_PB_SVrefine2Falcon1Dovetail_9597:HG2_PB_SVrefine2PBcRplusDovetail_3806:HG2_PB_SVrefine2Falcon2Bionano_7829;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4061;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0723982;ClusterMaxSizeDiff=0.0711054;ClusterMaxEditDist=0.189956;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2285;DistBack=2868;DistForward=126;DistMin=126;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=336;REFWIDENED=16:964489-964824;PctSeqSimilarity=0.9909;PctSizeSimilarity=0.9983;PctRecOverlap=0.9428;SizeDiff=-4;StartDistance=-129;EndDistance=-129;GTMatch=0;TruScore=97;MatchId=1966.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:0:30:0:14:./.:12:25:10:32:0/1:16:2:./.:10:121:.:12567:.
chr16	1235627	HG2_PB_SVrefine2PB10Xhap12_11434	T	TGGGGGGCGGGCGAGTAGACGGCATGTGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGAGTAGACGGTCGGCGTGCATAGGGCCGGGGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCAGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCAGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCATGCATAGGGCCGGGGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCATGCATAGGGCCGGGGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGTGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCATGCATAGGGCCGGGGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGTGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCATAGGGGCCGAAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGCGTAGGGGCCAGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGAGTAGACGGCGTGCATAGGGGCCGGAGGCGGGGTGTGTATGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGAGTAGACGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGAGTAGACGGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGCATGTGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGAGTAGACGGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGCATGTGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCAGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCGTGCATAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCAGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGTGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTACGTGGGGGGCGGGTGAGTAGACGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCATAGGGGCCGAAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGCGTAGGGGCCAGAGGCGGGGTGTGTACGGGGCGGGTGAGTAGACGGTCGGCGTGCGTAGGGGCCGGAGGCGGGGTGTGTACGGGGCAGGTGAGTAGACGGCGGTGGGGGGGCGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4071:HG2_PB_SVrefine2PB10Xhap12_11434:HG2_PB_pbsv_15814:HG3_PB_SVrefine2Falcon1Dovetail_9605:HG2_PB_SVrefine2Falcon2Bionano_7839:HG2_PB_SVrefine2PB10Xhap12_11433:HG2_PB_SVrefine2PBcRplusDovetail_3817;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11434;NumExactMatchSVs=1;ClusterMaxShiftDist=0.196587;ClusterMaxSizeDiff=0.196132;ClusterMaxEditDist=0.257004;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2273;DistBack=49;DistForward=29;DistMin=29;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=567;REFWIDENED=16:1235628-1236194;PctSeqSimilarity=0.9869;PctSizeSimilarity=0.993;PctRecOverlap=0.8925;SizeDiff=-16;StartDistance=-238;EndDistance=-238;GTMatch=1;TruScore=95;MatchId=1968.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:104:./.:0:8:0:0:./.:0:0:0:0:./.:0:0:1/1:3:61:.:2515:.
chr16	1310690	HG2_Ill_GATKHC_25086	G	GAGCCCGGAGACCCACGTCCACACACAGCCCGGAGACCCACATCCACACAC	20	PASS	ClusterIDs=HG2_Ill_GATKHC_25086:HG3_PB_HySA_23842:HG3_Ill_GATKHC_24927:HG2_PB_pbsv_15821:HG3_Ill_GATKHCSBGrefine_10350:HG3_PB_pbsv_15471;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHC_25086:HG3_Ill_GATKHC_24927:HG3_Ill_GATKHCSBGrefine_10350;NumExactMatchSVs=3;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.342857;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=1918;DistForward=61;DistMin=61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=304;REFWIDENED=16:1310646-1310949;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1969.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:29:0|1:16:4:0:24:./.:9:0:6:6:0/1:7:2:./.:.:.:.:.:.
chr16	1395654	HG4_PB_pbsv_15740	T	TCCACAGCACCCAGCCTCCCCAGGCCTCCACAGCAACGCCCAAGCCTCCCAGCAACCCCAGCCTA	10	PASS	ClusterIDs=HG4_PB_pbsv_15740:HG2_PB_PB10Xdip_12370:HG2_PB_HySA_28776:HG2_PB_pbsv_15823;NumClusterSVs=4;ExactMatchIDs=HG4_PB_pbsv_15740;NumExactMatchSVs=1;ClusterMaxShiftDist=0.078125;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.28125;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=64;DistBack=44;DistForward=8931;DistMin=44;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=16:1395653-1395657;PctSeqSimilarity=0.9173;PctSizeSimilarity=0.9844;PctRecOverlap=0.9538;SizeDiff=1;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=95;MatchId=1971.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:0|1:17:4:4:22:./.:3:0:3:0:./.:3:0:./.:.:.:.:.:.
chr16	1426066	HG2_Ill_GATKHC_25093	T	TTCCCTCCTCCCTCCAGGGCTGGGGCGCTCCTCCTCCCTCACTCCAAGGCTGGGGCACGCTCC	20	PASS	ClusterIDs=HG2_Ill_GATKHC_25093:HG2_PB_pbsv_15827:HG4_Ill_GATKHC_25000:HG4_Ill_150bpfermikitraw_19824;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHC_25093:HG4_Ill_GATKHC_25000:HG4_Ill_150bpfermikitraw_19824;NumExactMatchSVs=3;ClusterMaxShiftDist=0.032;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.112;PBcalls=1;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=1848;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=342;REFWIDENED=16:1426063-1426404;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1972.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:0|1:21:3:2:17:./.:4:1:4:1:0/1:8:1:./.:.:.:.:.:.
chr16	1921895	HG2_PB_SVrefine2PB10Xhap12_11448	A	AGGTTGCAGTGAGCAAAGACTGCACCACTGCACTCCAGCCTGGGCAAAAGGGCGAGACTCTGTCTCAAAAAACAAACAAACGAACAAACAAAAAACCCTTCCCACTGCACCTTGACTCAAATCCAGACTCCTTGCGGCAGCGTGCCATGCCCAGCTGACCTGGCCTCTGCCCTGAGAACCGCTCTCCGGTACCCTGGCTGCATTTCCTCAGCCTGGGCCTCGGGCCTTTGCAGATGCAGAGCCTCTTTCTCGAGCATCCCCGTCTTCCCAGGACAGGCTCTCCTCAGGTCTCCAGTAGAGGCCTTTCCTGCCACCCTGCCTCACGCAGTCGTGCCTCTGAACTCCCCTGGGGACACTGCTAGTTGCCTGCTGTGTTGTCTTTCTCCTTCATGACATGGTAGTTCGTCAGGACAGAGCCACGCCCTCACTGCACCCCACAGTGACCACGCAGTTCAGGGCCTCACAGGCAGCAGCTGCCGGGTATGTGCTCAGTAAATGAATACATGAGCCCTTTTAAAAGCGATCTAATTTGTAAACTGAGGATAATATTGCTACAATTAGCCTTTGGGAGACACAGAATTTTAGTTAACAGCTAATTTTACATTTATAACATGCACTGAAATTATGGGAACAAGTGTGATTTCTATCTTGCTATTGTAGACAAATGAAGAAGTTTCCAGGGAGCTCAGTGATGAGGTTCCCATGATTTCCCATGATTTTTTTTTTTTTTTTTTTTGAGACAGGATCTTGCTCTGTTGCCCAGGCTGGAGTGCAATGGCGCGATCTTGGCTCACTGCAACCTCTGCATCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGGGCACCACCACCAAGCTCGGCTAATTTTTGTTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTTAAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTCCAACTCCTGACCTCAGGTGATCTTCCCGCCTCGGCCTCCCAAAGCACTGGGGTGACCGGCATGAGCCACTGCACCCAGCAGACATCTGCACTTTTTTTTTTTTTTCTGTCGCGGGGGCTGAAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCTGCTTCCTGGGTTCAAGCAATTCTCCAGTCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCGCCACCACGCCTGGCTAATTTTTGTATTTTTTGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCATCGGCCTCCCAAAGCTGAGGTAATCCCAAAGGATTACAGGGGTGAGCCACCGAGCCCGGCCTTTTTTTTTTTTTTTTTTTTTTTTTGTGAGATGGAGTCTCGCTCTGTCTCCCAGGCTGGAGTGCAGTGGCGAGATCTCGGTTCACCGCAACCTCCGCCTCCCGGTTCAAGCGATTTTCCTGCCTCAACCTCCCTAAGTAGCTGGGATTACAGGCGCCCGCCACCACGCCCGGCTAATTTTGTATTTTTAGGAGCGACGGGGTTTCTCCACGTTGGTCAGGCTGGTCTCGAACTTCTGACCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGAAAACAGGCGTGAGCCACCACTGCACTTTTTAACTGACAGGTCGGGGCTTGGAAAACTCAAAGTAGGACCCACGTGTCAGCCGCTCTCAGCTCCGGGAGGAGCTTTCCCGCGTGTCCTCCTCCGGCACCGGCCGCGAGAAGCCCCGGGAGGGGCAAAGCTCGGGGGCCGCGGGAGGCGCTGGGAGGGCGGGCGGCGCCACAAGACAACCTGCCCCCGCCAACCCCGCGGTGAGCCGAGGATGCGACCAGGACCGGACTCCGCGTGGGGCGCAGGCACGTACCCCACACGCTGCGCGGCTCCGCCCGCTCCCCTCCCGGCACGCGCGCGCCCGCCGCTCCCTCAGGGCCTCCGCCAGCCGAAC	20	PASS	ClusterIDs=HG3_PB_HySA_23866:HG2_PB_pbsv_15838:HG3_PB_pbsv_15484:HG2_PB_PB10Xdip_11270:HG4_PB_pbsv_15754:HG2_PB_PB10Xdip_11269:HG4_PB_SVrefine2Falcon1Dovetail_9643:HG3_PB_SVrefine2Falcon1Dovetail_9613:HG4_PB_SVrefine2PBcRDovetail_7851:HG2_PB_SVrefine2Falcon2Bionano_7848:HG2_PB_SVrefine2PB10Xhap12_11448:HG4_Ill_SVrefine2DISCOVARDovetail_11129:HG2_PB_SVrefine2PBcRplusDovetail_3827:HG2_Ill_SVrefine2DISCOVARplusDovetail_4486:HG2_10X_SVrefine210Xhap12_10930:HG2_PB_SVrefine2Falcon1plusDovetail_4083:HG3_Ill_SVrefine2DISCOVARDovetail_11312:HG4_PB_HySA_22998:HG2_PB_HySA_28792;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11448;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0987114;ClusterMaxSizeDiff=0.0977389;ClusterMaxEditDist=0.203655;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=1958;DistBack=6401;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=16:1921896-1921896;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.9995;PctRecOverlap=0.999;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1973.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:76:1/1:1:9:1:28:1/1:0:6:1:10:1/1:0:27:1/1:15:310:.:2022:.
chr16	2913462	HG2_PB_PB10Xdip_11718	C	CAGGCTGGTCTGGAACTCTTGACCTCAGGTGACCCACCTGCCTCAGCCTTCCAAAGTGCTGGTGTGAGCCACCATGCCTGGTCTAGTACCCTCCAAATCAATAAAGATAAAATTTTAAAAATCATTTAGTTCGTGCCTGTAATCCCAACACTTTGGGAGGCCGAGGCAGGAGGATCATCTGAGCCCAGGAGTTTAAGACCAGCCTGGACAACATAGTGAGATCCCTTCTCTATACATTTTTTTTAATTATTTAGTCTAATAGTTGTTGAAGTCAATGGGGGAAACCAAAGCAGGCAAGAGGTGTGGGGAGTGGGTGGGGGTTGGGGTGGATGAGGATGGAGGGTCGCAGTCTTAAGTAAGTGGCCCCAGCAGTTCTTCCCAATGAGGGTAACATTTGAGGAGAGACCTGAGATGGGAGAGAGCTGTGTGGAGCGCTCAGGGGACCGTTCCAGCCACAGGACAGCAAAGGCCAAGGCTGGGATGTGTGGGCCCAGGTTGGGGGTCTCAGGGCGCAGGGAGAGAGTGGCAGAGGGTGTGAGGCATGAAGGCCTTGGTCTTTGTTGAGGGGCTGAAGCCCCTCCGCCCTGGCTGCATTTTAGCGGGATCCCAGGAGGAGCCACGTTAACACCTGGCTGTGAGGAGGCTGGGGTGAAGCAGGGCTACCTGTCGGGCCCAGGACAGAGAAAATGGGGTGGAGAAAGGGATGGATTCTAGGTCTTTCTCTGAGGCCAAGCAGACAGGACCAAGGGCCAGAGGGCCAGTGCAGTGGGGGCAGTGGCTGCCTGAGGCAAGGGTTGTGGGCAAGATGGGGAGTGACTCTGGATCTGCTTAGCTGGAGACAAGGCCCAGGGTAGGTGAGCTCAAGGCAGAGGTCGGGTTGGAGGGAAACCTGGCATCTGGAGCCTGGGGAGGATTTAAAGTCTGGAGGCTATTGAGGTGACCAACGAGCAGGTGACATTTGCCATCGGAGACCACGTGGGCGTGGACAGCCAAAGAGTTCCACATCCCTCACTCACCTGCAAACGTGACGGGACTGGAACCGCCACAAAGCAGAGATGTGGGCGGCCAGGACAGTGTCCCAGGCCAAGGGAGCCCCTGTAGGAACTGACCACGCGGCTCCGGCACAGGGGCTGGGTGCTTGGGCTGGCCGGGGCCACCAGACCACTGAGGTCCTCCTGGGCCCCGTAGAGAAGACTCTGCTCAAGGGCGGGGAAGGTACTGCCAGCTTGCAGCAGAGTCAAGCTGGGATCTGAGCTGGGTTAGAGGTGTGGAGGGGACGCAGGAGGCAGGTGGGGAAGCGGGTGAGGGCTGCATCCAGGAAGAAACTGTGGCAGGGACTCTGTGGGAAACGGAGATGGAGCGAGGGGGATGGCAGGTGCCGGCGAGCCAGGCAGGTGGTGGGGTGACCAGCTGCCCGGGACGCCCAGGACTGAGAGCCTGCCTGAAATATTCTCCAGCAGGCTGAGACTGTTGGCTGCCCCAGGCGGTGCCTCTGTCCGCTGTGATGACGGAGGTCGGCAGAGCGTTTCAGGCCCAGGGGTCCCGTGGTTGCAAATTTAGGAAGGTGGGAGATAGAAGTCTAGGATGCCCCGGTGTCTAAGTGGGGCTGAAAGAGGCAGGTCTTCAGTGTCCCTTTAATCCCCCCACCCCACCCAGAGAGGGGCTGCGGTGGGAGCCGTGGGGGGTGGAGAGGCCTTGCGGGGGTGACCGTAACGTGCTGCCTGCCTCTCCTCCGCAGTTTCAGTATTTATGGAACTCTGACCCTAGCTCAGAGGTGGCTGGCTGTGTTTTGTGCAAGGAGGGGCTGGGTCTTTCGGGGCTGAGGAGGTGGGGAGGCTGGTGGAAGGGGAGGCCACCAGGAAGCTGTGAACTTGGGTGTGAAGCCACCGTGATCCAGGCAAGCTGCCTGGCCTCACAGGGCCTCTGTTTCCTCCTTGGCCCAGCGGCTTATTCTGGGACCAGAGCGGTAAACTGGCTGTGGAATCCAACCTTCCGGGGGTCTTTTTAGACCTGGCCACGTTGCTTGTTTTTTCTAAATTGAACAAATACGCATTTTTTAAAAAAAATCTGAATTTCAAATGATGCTGCTGTGAACATGGATGTATAAGTATCTGTTTGAATCCCTGCTCAAACACACGTGTACACGGATATTCACTGTGGCATCACTGACAATGGGTGACGTGGAAACCACCACATGTCCACGGACAGGCGAATGGGTGAGCGCAGTGCAGTCTATTCCCACCGTGGGAGGACGCGCAGCCTTAGCCTCAGCCTGCATGGACCTTGAGGACGTTGAGTTCAGTGACAGGGGCTGGACACAAAAGGACAGACACTGTATGATCCTCCTAAGAGAGGTCCCTTGAGCAGTCAAATTCATGGAGACGGAACAGAATGGGCCAGGCGCGGTGGCTCATGCCTGTAATTCCAGCACTTTAGGAGGCCGAGGTGGGAGGATTGCTTGAGCCCGGGAGATTGAGACCAGCCTGAGCAACATAGTGAGACCTTGTCTCTACAAAAAATACCAAAATTCGCTGGGCATGGTGGTGCATGCCTGTAGTCCCAGCTACTCAGGAGGCTCAAGTGGGAGGATGGCTTGAGTCCAGGAGGTTGAGGCTGCAGTGAGCCATGATCATGCCACTGCACCGTGCAGCCTGGGCAACAGAGTGAGACCTTGGAAAAAAAAAAAAAAAGAAGGGAGGGATGGACGGAGGGAGGGAGGGAGAAAAGGAGGGAGGAAGGCAAGCAGGCAGGAAGGAAAATGTGGGTGCCAGGGGCTGGGGAGAGAAATGGGGAAGGAAGGAAGGGAGGGGAGGGGAGGAGAGGGGAGGGGGAAATGGAAAGGAAGGGAGGGGAGGGGAGGAGAGAGGAGGGGGAAATGGATGAGAAGGGACGGAGGGAGGGAGGGGAACGGCGGGTGCCAGGGGCTGGGGAGGGAAATGGGGAGAGTGTTTTCTGGGGCAGAGCTTCAGTTTGGGAGGATGCAGGGGAGGGGGAAATGGAAAGGAAGGGAGGGGAGGGGAGGAGAGAGCAGGGGGAAATGGAAGGGAAGGGACGGAGGGAGGGGAATGGCGGGTGCCAGGGGCTGGGGAGGGAAATGGAGAGAGTGTTTTCTGGGGCAGAGCTTCAGTTTGGGAGGATGCAAAAGTTCTGGAGAGGGATGATGGGGTTGGCTGCACGGCCGTGTGAATGTGCTGGGCGTTACTGAACTGTGCACTTAAGCAAGGTTAAATGGCCAATCTTCCCTATATTTTACCACAACTAAAAAAATAAAGATGTCTGGATTCTCACTTTTTCATGAAAAATCAGAAGCTCTGATTGCAGAACAGTCCCCACCTCACCCCCCTGTGACACTGGCCCTATACTGGGTCCCCAAATGCAGGATCCTGGGGTGTTTGAGTTCTGGACACTCTTGTTAGCAGTTGGGGTCTAGGACAGAGCCAGTGCTCCATCCGCTCCTCAGGTGACTCAGGTGAGGCTCCAGTTAAGCTGGACTGAGCAGAGCAGAGCATTGCAAAGCAGCCCAACAGTTCCTTCCTCCCCTTGTGAGAAGGGCTGAGGCCTCCCAGGGCTAAGTGTGACTGAGTAAAGGGCAAGCTGGCTGCTCTGCGGGCAGGGTTTTCTGGGGCACTAATGGTTTTGAGGAATCTGGCCTGTTTGGCCCTGGGAATGTTGCAGGACCCGCTGAGGTAACACTGCTCACCAGCTGGCATTTCACCACCTTCCCACGGGGATGTCCCTCTGTCTGATTAAGCTTCTGAGCTGCCCTGGGAACCTGTTTCCTTCGTAGCCTGCCCAGCACTTGGGGCTTCCCTGCCTCTTGGTGACTTGGGTCAAACTGGGTTCCAGCCCATCCTAGGTTCCAGTCCTCTGCCTCCACTGTGGGCTCCTTGAGGCCTCAGCTCTGTCCATCTCAGGCCTGGCCCCCAGACTCTGCCCCTCCTCACTTTCCACCAGAAACCCAGCCTGGATTTCCCACAGCTCAGTAGCTTCCTGAAGCCTCGGGGAGGTCCAGAGGGCGGCCTCGAATTGCCCATCCTGTGTCCAGCACATCCAAAGCCAGACACAAGCAGCCCAGCATCCTCTGTCTCTTCCACCTGGGACCAGCCAGAACTGACTCTTGCATCTCAAAGCCCCAACACTGGGAGCTCAGTCTGGAAGAATTGCGCCTCCTCCACTGCCTGGAAGCAGAGAGGGAGGGAGGGAAGGACAGGACAGGGTCTGGGCAGCTGGGATGCAGCCCGTGGGAAGAGTCGAGCTGGGGAAGTGACACAGAGGAAGTGGGCGAGCAGGGCCAGGTGATTCCCTGGGTGTCCGTCACCAGGCTGGGCAGCTCCTACGCTGTCCGTGACTCATCAGTGACACAGAGGAGGGGCAGGACCTCAGAGTCCTGAGATCAGAGGTCATGGTGGGGCTATCTGCCAGCTTCAGAGAGTCTGCAAATCACAGGAGAGGAGGTGGCTGACCACACGGAGATTAGTCACATCTGGGGGTGCTGTGGGATGAGGGACCCCAGTTCAGTTCCAGAGTGAGCTGTGCAGAGCTGGGATCTGCAGGTCTCTGCCTTCAGGGCCACCTGCTTAGCTGTGACCTAGTCCCCCATGTGAGCTGGGCAGCCACGTCAGGCCTGCTGGGAGAGGAGGCAGAGAAACCAGCTCTGACCACCCCCGCAGGTTGTGAAGCCAAGTCCAACCCGTCCTCCTCCCCCTCATCCTTCCAGGGAAATGAGTGTCTCTGATAATCACTGCGAATGAGTGGCTTCAATGATAAGTCAGAGTGTGGAGTTTCTCCACCAGGAGATCAGACAGCTCTGGGGCAGAGGGGCACATGTGTGTGGGGAAAGTGGGTCAGCAGCTGGAATGGGCTCACCCCTCTGTGCCGGTGGAGACGCAGCTCCCACTTCCACTCCCACAGCTGTCCCTTCAAGCCATAATCTGGGCGCTGGGGACTTGGACGTGCAACAGGCATCTCAAAGTAGGAAATGTGGAGAGTCACTCCAATCCACCCCTCCCCCGGGCTTCCCTGCTCAGAAAATGGCCCTGCTATTCATCCGGCTCTCCAGCCGCGAGCCTGGATGTCGCCCCTGGTTTGTCCTTTTCCTCCCCGCCTGTATCTGTCCATCAGCAGGTCATGGCGTTTCAGACCTGGAAGTTGCTGGTGGACGCAGGCACTTCCCTCCATGTCCACAGGGCCCCATCCATCTCCTCTGCAACAGGTGGGCGGGTACCCTGGGGTCCCTCAAGTCTCTTGTCTCAGGAATCAGAGCTATTTAGTGCAACATAAATTACATCATGGCACTTCCCAGTTTAACTTTCTCTAGCGGGGCCCACTGCTTTCAGGAGATCCTGTAATTCCTGGACTCCCTCGGGGCTCGGCGTCATCAGCCCCTGCTGACCTCTCTGCCTGCCGATGGTCACCCTGCCCAGCTCACTCCTGTCCAGCCACACTGGTCCTCTATTTGCCCTAAGCCCTTTTCTACCTAAGGGCCTTGGCACACGCTGCTCCATCTATCCCTGTTCAGAGCTGACAGGTCTCCTCAGGTCTTAGTTTAAGTGACACTCTCCCTCTTATTCTTTTTCTCATCCCTACAGGGAAAAGTAAGGAAGATACGAAATGAGCAAGTGAAATGATTGTATATACTTTCAAGGGGAAGCTGGAGCCACCAGGGATTACCCCATCCTATAGGGGTACTCACCTTGCTTAGGCTACTCTGTAAAGACAGAAGTTCATTGGCAGGAAACTGATAGTGATGTAAATAATCCCTGTGCATAGAAATGCTACTGTGGGTATCGACTGTTCTGACAGCTCCATATCCACTGGCGAATTCACTTCAGCATTACTTATCAGACTGTAAGTGTATGGTGCTTTGAATAAGTTGCTATATATATATATAATTTTTTTTTTTTTAGATGAAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCTCGATCTCTCAGCTCACTGCAATCTCCGCCTCCTGGACTCAAGCGATACTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCCCACCACCAAGCCCTGCCAATTTTTGTATTTTTAGTAGAGACGGGGTTTTGCCATGTTGAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4085:HG2_PB_pbsv_15845:HG2_PB_PB10Xdip_11719:HG2_PB_PB10Xdip_11718:HG2_PB_assemblyticsPBcR_9085:HG3_PB_SVrefine2PBcRDovetail_7470:HG2_10X_SVrefine210Xhap12_10949:HG2_PB_SVrefine2PBcRplusDovetail_3831:HG2_PB_SVrefine2PB10Xhap12_11451:HG3_Ill_SVrefine2DISCOVARDovetail_11321:HG3_PB_SVrefine2Falcon1Dovetail_9617;NumClusterSVs=11;ExactMatchIDs=HG2_PB_PB10Xdip_11718:HG2_PB_PB10Xdip_11719;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0590454;ClusterMaxSizeDiff=0.0590454;ClusterMaxEditDist=0.178776;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=6094;DistBack=-62;DistForward=11;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=120;REFWIDENED=16:2913405-2913524;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1974.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:107:1/1:0:25:0:27:./.:0:6:1:3:1/1:0:36:1/1:0:476:.:6027:.
chr16	3089308	HG2_PB_SVrefine2PBcRplusDovetail_3832	T	TGAGATGGAGTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9646:HG2_PB_SVrefine2PB10Xhap12_11452:HG2_PB_PB10Xdip_11721:HG2_PB_assemblyticsPBcR_9086:HG3_PB_pbsv_15493:HG2_PB_pbsv_15846:HG2_PB_HySA_28815:HG3_PB_HySA_23894:HG3_PB_SVrefine2PBcRDovetail_7472:HG3_PB_SVrefine2Falcon1Dovetail_9618:HG2_PB_SVrefine2PBcRplusDovetail_3832:HG2_PB_SVrefine2Falcon1plusDovetail_4086;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_3832:HG3_PB_SVrefine2Falcon1Dovetail_9618;NumExactMatchSVs=2;ClusterMaxShiftDist=0.20711;ClusterMaxSizeDiff=0.20711;ClusterMaxEditDist=0.222566;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=322;DistBack=34585;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=16:3089309-3089322;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1975.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:30:0|1:15:1:3:25:0|1:11:0:0:5:0/1:25:14:0/1:6:22:.:.:.
chr16	3257168	HG3_PB_pbsv_15499	G	GGGGAAGGGAGGGAGGGGAGGGAGGAGAGTGGAGGGAGGGAAATGGCAGGAGAGGGGAGGGGGGAAATGGAGAGGGGGAGGGAGGGAAATGGAGGAGGGGAGAGGGAGGGAGGATGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3835:HG3_PB_SVrefine2PBcRDovetail_7475:HG3_PB_SVrefine2Falcon1Dovetail_9621:HG4_PB_SVrefine2Falcon1Dovetail_9648:HG2_PB_SVrefine2Falcon1plusDovetail_4089:HG4_PB_HySA_23013:HG4_PB_pbsv_15763:HG2_PB_HySA_28823:HG3_PB_HySA_23902:HG3_PB_pbsv_15499:HG4_PB_SVrefine2PBcRDovetail_7858:HG2_PB_SVrefine2PB10Xhap12_11456:HG2_PB_PB10Xdip_11733:HG2_PB_PB10Xdip_11732:HG2_PB_SVrefine2PB10Xhap12_11455:HG2_PB_pbsv_15853;NumClusterSVs=16;ExactMatchIDs=HG3_PB_pbsv_15499;NumExactMatchSVs=1;ClusterMaxShiftDist=0.159292;ClusterMaxSizeDiff=0.159292;ClusterMaxEditDist=0.304933;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=116;DistBack=-16;DistForward=23;DistMin=-16;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=16:3257163-3257190;PctSeqSimilarity=0.8798;PctSizeSimilarity=0.9397;PctRecOverlap=0.9316;SizeDiff=7;StartDistance=3;EndDistance=3;GTMatch=1;TruScore=91;MatchId=1977.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:0:20:0:24:./.:3:4:3:6:./.:2:1:./.:.:.:.:.:.
chr16	3706331	HG2_PB_SVrefine2Falcon1plusDovetail_4091	A	AGGTCCCGGACCAATGGGTTGAGCAGGTGCCTGGCTCCCCCGCCCTCCTGTCGCCTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4091:HG2_PB_PB10Xdip_11999:HG2_PB_HySA_28826:HG4_PB_HySA_23015:HG4_PB_SVrefine2PBcRDovetail_7860:HG2_PB_pbsv_15856:HG4_PB_SVrefine2Falcon1Dovetail_9651:HG2_PB_SVrefine2PB10Xhap12_11458;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4091:HG4_PB_SVrefine2PBcRDovetail_7860:HG4_PB_SVrefine2Falcon1Dovetail_9651:HG2_PB_SVrefine2PB10Xhap12_11458;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.214286;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=56;DistBack=2523;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=226;REFWIDENED=16:3706332-3706557;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1978.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:43:./.:16:24:3:4:./.:2:0:1:0:./.:18:1:./.:.:.:.:.:.
chr16	4261512	HG2_PB_PB10Xdip_12003	G	GTGATGATGATATGATGGTGATGATGGTGATGGTGATGACCGTGCCGATGATGAGGATCGTGA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_12003:HG3_PB_pbsv_15506:HG4_PB_HySA_23023:HG4_PB_pbsv_15772:HG2_PB_PB10Xdip_12004;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_12003:HG2_PB_PB10Xdip_12004;NumExactMatchSVs=2;ClusterMaxShiftDist=0.134328;ClusterMaxSizeDiff=0.119403;ClusterMaxEditDist=0.205882;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=62;DistBack=-158;DistForward=13;DistMin=-158;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=403;REFWIDENED=16:4261416-4261818;PctSeqSimilarity=0.9921;PctSizeSimilarity=0.9841;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1980.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:43:1/1:2:18:1:12:./.:2:5:2:5:1/1:0:11:./.:.:.:.:.:.
chr16	4847619	HG4_Ill_Cortex_1255	T	TGGGGTACACCAGACCCCAAGACTGGGGCGCTCTGAGGGCGTGGCAGGGCCCTCAGAACCCCTGCCCACTGTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10963:HG3_PB_pbsv_15510:HG3_PB_HySA_23923:HG2_PB_pbsv_15861:HG4_PB_pbsv_15774:HG2_Ill_breakscan11_4660:HG4_Ill_svaba_19595:HG4_Ill_manta_3675:HG4_Ill_Krunchall_21618:HG4_Ill_GATKHC_25041:HG4_Ill_GATKHCSBGrefine_10808:HG4_Ill_Cortex_1255:HG4_Ill_250bpfermikitraw_20615:HG4_Ill_150bpfermikitraw_19858:HG3_Ill_svaba_19776:HG3_Ill_manta_3528:HG3_Ill_Spiral_16259:HG3_Ill_Krunchall_20885:HG3_Ill_GATKHC_24976:HG3_Ill_GATKHCSBGrefine_10366:HG3_Ill_Cortex_1307:HG3_Ill_250bpfermikitraw_20347:HG3_Ill_150bpfermikitraw_19806:HG2_Ill_svaba_19622:HG2_Ill_manta_4325:HG2_Ill_SpiralSDKrefine_5868:HG2_Ill_Krunchall_21284:HG2_Ill_GATKHC_25131:HG2_Ill_GATKHCSBGrefine_10442:HG2_Ill_Cortex_3048:HG2_Ill_250bpfermikitraw_20936:HG2_Ill_150bpfermikitraw_19751:HG2_PB_PB10Xdip_12012:HG2_PB_PB10Xdip_12011:HG4_PB_HySA_23025:HG3_PB_SVrefine2PBcRDovetail_7478:HG3_PB_SVrefine2Falcon1Dovetail_9626:HG3_Ill_SVrefine2DISCOVARDovetail_11329:HG2_PB_SVrefine2PBcRplusDovetail_3838:HG2_PB_SVrefine2PB10Xhap12_11460:HG2_PB_SVrefine2Falcon1plusDovetail_4093:HG2_Ill_SVrefine2DISCOVARplusDovetail_4504;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19751:HG2_Ill_250bpfermikitraw_20936:HG2_Ill_Cortex_3048:HG2_Ill_GATKHCSBGrefine_10442:HG2_Ill_GATKHC_25131:HG2_Ill_Krunchall_21284:HG2_Ill_SpiralSDKrefine_5868:HG2_Ill_manta_4325:HG2_Ill_svaba_19622:HG3_Ill_150bpfermikitraw_19806:HG3_Ill_250bpfermikitraw_20347:HG3_Ill_Cortex_1307:HG3_Ill_GATKHCSBGrefine_10366:HG3_Ill_GATKHC_24976:HG3_Ill_Krunchall_20885:HG3_Ill_Spiral_16259:HG3_Ill_manta_3528:HG3_Ill_svaba_19776:HG4_Ill_150bpfermikitraw_19858:HG4_Ill_250bpfermikitraw_20615:HG4_Ill_Cortex_1255:HG4_Ill_GATKHCSBGrefine_10808:HG4_Ill_GATKHC_25041:HG4_Ill_Krunchall_21618:HG4_Ill_manta_3675:HG4_Ill_svaba_19595;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0680272;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.204082;PBcalls=12;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=72;DistBack=-58;DistForward=6;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=62;REFWIDENED=16:4847616-4847677;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1981.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:1/1:2:36:2:17:1/1:0:21:0:18:1/1:0:47:./.:.:.:.:.:.
chr16	5252646	HG3_PB_SVrefine2Falcon1Dovetail_9627	G	AGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCCTCCCTCCCGGACGGGGCGCTGGCCGGGCGGGGGGCTGACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCTGGGGGCTGACCCCCCCCCCTCCCGGACGGGGCGGCTGGCCGGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11462:HG3_PB_assemblyticsfalcon_9412:HG3_PB_SVrefine2Falcon1Dovetail_9627:HG4_PB_assemblyticsfalcon_9275:HG4_PB_SVrefine2Falcon1Dovetail_9654:HG2_PB_pbsv_15862:HG3_PB_pbsv_15511:HG2_PB_PB10Xdip_12014:HG2_PB_PB10Xdip_12013:HG4_PB_pbsv_15777:HG2_PB_SVrefine2PBcRplusDovetail_3839;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9627:HG3_PB_assemblyticsfalcon_9412;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0674157;ClusterMaxSizeDiff=0.0674157;ClusterMaxEditDist=0.296943;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=214;DistBack=27;DistForward=429;DistMin=27;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=306;REFWIDENED=16:5252340-5252645;PctSeqSimilarity=0.9819;PctSizeSimilarity=0.9554;PctRecOverlap=0.4844;SizeDiff=-10;StartDistance=111;EndDistance=111;GTMatch=0;TruScore=80;MatchId=1982.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:2:38:0:5:./.:1:0:2:0:0/1:32:7:./.:.:.:.:.:.
chr16	5257587	HG3_Ill_250bpfermikitraw_20351	A	ATATATATATACGTATATATATATACGTATATATACGTATATATATATACGTATATATATATGTG	20	PASS	ClusterIDs=HG3_PB_HySA_23925:HG4_PB_pbsv_15778:HG2_PB_pbsv_15863:HG4_PB_assemblyticsfalcon_9276:HG3_PB_assemblyticsfalcon_9413:HG4_Ill_250bpfermikitraw_20622:HG3_PB_pbsv_15512:HG4_Ill_150bpfermikitraw_19865:HG3_Ill_manta_3529:HG3_Ill_Spiral_16264:HG3_Ill_GATKHC_24980:HG3_Ill_GATKHCSBGrefine_10367:HG3_Ill_250bpfermikitraw_20351:HG3_Ill_150bpfermikitraw_19810:HG2_PB_assemblyticsfalcon_9430:HG2_PB_assemblyticsPBcR_9106:HG2_Ill_manta_4326:HG2_Ill_Krunchall_21291:HG2_Ill_GATKHC_25137:HG2_Ill_GATKHCSBGrefine_10443:HG2_Ill_250bpfermikitraw_20942:HG2_Ill_150bpfermikitraw_19756:HG4_Ill_scalpel_14472:HG4_Ill_Krunchall_21625:HG4_Ill_GATKHC_25047:HG4_Ill_GATKHCSBGrefine_10809:HG2_PB_PB10Xdip_12016:HG2_PB_PB10Xdip_12015;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19756:HG2_Ill_250bpfermikitraw_20942:HG2_Ill_GATKHCSBGrefine_10443:HG2_Ill_GATKHC_25137:HG2_Ill_Krunchall_21291:HG2_Ill_manta_4326:HG2_PB_assemblyticsPBcR_9106:HG2_PB_assemblyticsfalcon_9430:HG3_Ill_150bpfermikitraw_19810:HG3_Ill_250bpfermikitraw_20351:HG3_Ill_GATKHCSBGrefine_10367:HG3_Ill_GATKHC_24980:HG3_Ill_Spiral_16264:HG3_Ill_manta_3529:HG4_Ill_150bpfermikitraw_19865:HG4_Ill_250bpfermikitraw_20622;NumExactMatchSVs=16;ClusterMaxShiftDist=0.351145;ClusterMaxSizeDiff=0.351145;ClusterMaxEditDist=0.351145;PBcalls=10;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=3799;DistForward=3194;DistMin=3194;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=48;REFWIDENED=16:5257550-5257597;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1983.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:69:1/1:1:26:2:26:./.:3:2:2:10:1/1:0:44:./.:.:.:.:.:.
chr16	5702979	HG3_PB_SVrefine2PBcRDovetail_7481	C	CTGCTGAGCTGCTGTGCAGAAGGTGGGGTGCTGAGCCGTGTGCTGGGCTTCTGTGCGGAAAGTGGGGTGCTGAGCTGTGTGCTGGGCCTGTGTGAGCAAGGTGGGGTGCTGAGTTGTGTGCTGGGCCTTTGTGTGGAAGGTGGGGTGCTGAGCCGTGTGCTGGCCTTCTGTGCGGAAGGTGGGGTGCGGAACCGTGTGCTGCACCTTTGTGCGGAAGGTGGGGTGCTTAGCCATG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4096:HG3_PB_HySA_23929:HG2_PB_pbsv_15866:HG2_PB_PB10Xdip_12040:HG3_PB_pbsv_15516:HG2_PB_HySA_28846:HG4_PB_SVrefine2Falcon1Dovetail_9656:HG3_PB_SVrefine2PBcRDovetail_7481:HG3_PB_SVrefine2Falcon1Dovetail_9629:HG2_PB_SVrefine2PB10Xhap12_11464;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4096:HG4_PB_SVrefine2Falcon1Dovetail_9656:HG3_PB_SVrefine2PBcRDovetail_7481:HG3_PB_SVrefine2Falcon1Dovetail_9629:HG2_PB_SVrefine2PB10Xhap12_11464;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0463158;ClusterMaxSizeDiff=0.0378947;ClusterMaxEditDist=0.260504;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=234;DistBack=823;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=249;REFWIDENED=16:5702980-5703228;PctSeqSimilarity=0.9738;PctSizeSimilarity=0.9957;PctRecOverlap=0.1277;SizeDiff=1;StartDistance=-204;EndDistance=-204;GTMatch=0;TruScore=69;MatchId=1984.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:20:71:0|1:18:2:1:51:./.:2:4:4:1:./.:2:1:./.:.:.:.:.:.
chr16	6343833	HG3_Ill_GATKHCSBGrefine_10370	A	ACCAGAGGAAGAGAGACACACCAGAGAATACCTAGGCAATATGACAGCTACATTGTAGTGGGAAGCACGTGGTGAAGGGACACATAGCCCAGAAAGGTAGAGTGAGGTCAGCTTGTTGGTTCTACAGATGCAGCTCTAAGGCATTTACCAATATCCCTTAGGCAGCGGGGAACCATTGAAGGTGGTATATGAAAGCCATGATCATCCTGGGTACAGCTTTCAAAGCCCATCCTATTAGATGAATGTTCTTGCTCCATTGAGAATATTCAGCAATTAAAATTTACTAGCATAGAATGCCATCAGAGTCACCCTTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9630:HG3_Ill_Spiral_16275:HG2_Ill_Spiral_1039:HG2_PB_pbsv_15869:HG3_PB_pbsv_15520:HG3_PB_HySA_23938:HG3_Ill_svaba_19790:HG3_Ill_GATKHCSBGrefine_10370:HG3_Ill_Cortex_1310:HG2_Ill_svaba_19635:HG2_Ill_SVrefine2DISCOVARplusDovetail_4511:HG2_Ill_GATKHCSBGrefine_10447:HG2_Ill_Cortex_3055:HG2_10X_SVrefine210Xhap12_10971:HG3_PB_SVrefine2PBcRDovetail_7483;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10971:HG2_Ill_Cortex_3055:HG2_Ill_GATKHCSBGrefine_10447:HG2_Ill_SVrefine2DISCOVARplusDovetail_4511:HG2_Ill_svaba_19635:HG3_Ill_Cortex_1310:HG3_Ill_GATKHCSBGrefine_10370:HG3_Ill_svaba_19790;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0873239;ClusterMaxSizeDiff=0.0873239;ClusterMaxEditDist=0.191489;PBcalls=5;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=313;DistBack=-9;DistForward=-1;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=16:6343834-6343834;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1985.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:./.:22:8:4:21:0|1:19:0:0:23:0/1:38:14:0/1:4:15:.:.:.
chr16	7196995	HG2_Ill_SVrefine2DISCOVARplusDovetail_4519	T	TTTTGAGATGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTACCGGGTTCACGCCACTCTCCTGCCTCAGCCTCCCAAGTAGCTTGGACTACAGGTACCCACCACCATGCTTGGCTAACTTTTTTTATTTTTAGTAGAGATGGGATTTCACCATGTTAGCCACGATGGTCTCGATCTCATGACCTCGTGATCCACCCGCCTTGGCCTCCCAAACTGCTGGGATTACAGGTGTGAGCCACCACGCCCAGCCAAATGCGTTTTTTTCAACTGCAGTTGGTTCTAGTGTTTATTTGCATTTTGTTTTATTGCAGACCTTCATGGCACTTGAAATCGGGCCTTGAGACTCCCACCGCAGTGGGTGCTGCGTATGTCACACTCAACACATGATTCTGTTAATTCACCAGCCAAGAGCCATCATGTGGCTGTGGTTGAAGCCCAAGGACCCTTTAGGTTTACTCTTGCTTCATCTCATGGCCTCCACCTTGACATTGAGGCTGTTGCTGTGGGCGAGTACCTAGTTTATTTCTATGGAGAAATCTGATCAAACAGCATCTTGAGTTTGACAGCAAACAAGAAAAACCATAGGGTCAGTGACATTTAAAGGAGTCCCATGGAAGCCATGATTGGGATAAGTGAAGACTGAAGAAAAACAAATGGGGGTTATTTTTCTAAGTGGGTTTTCAATAAGTAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCAGGTGTGCACTCTTTTGGGTCTTTTGCGTGTGTTAAATTTTTATTTTTTGCAATTTTTATTTTAGGTTCAAATACTACATGCACAGGTTTGTTACATGGGTAAATTGTTTATTTATTTAATTATTATTATTATTATTA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1853:HG3_PB_pbsv_15525:HG2_PB_pbsv_15873:HG4_PB_pbsv_15789:HG4_Ill_MetaSV_1803:HG2_Ill_MetaSV_1745:HG3_Ill_GATKHCSBGrefine_10377:HG2_PB_PB10Xdip_12089:HG2_PB_PB10Xdip_12088:HG4_PB_SVrefine2Falcon1Dovetail_9659:HG3_PB_SVrefine2Falcon1Dovetail_9632:HG3_Ill_SVrefine2DISCOVARDovetail_11342:HG2_PB_SVrefine2Falcon1plusDovetail_4099:HG2_Ill_SVrefine2DISCOVARplusDovetail_4519:HG2_PB_HySA_28881:HG2_PB_SVrefine2PBcRplusDovetail_3843:HG2_PB_SVrefine2PB10Xhap12_11467:HG4_Ill_SVrefine2DISCOVARDovetail_11158:HG2_10X_SVrefine210Xhap12_10973:HG4_PB_SVrefine2PBcRDovetail_7866:HG3_PB_SVrefine2PBcRDovetail_7484:HG3_Ill_Spiral_16287;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4519:HG2_PB_SVrefine2Falcon1plusDovetail_4099:HG3_Ill_SVrefine2DISCOVARDovetail_11342;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0488865;ClusterMaxSizeDiff=0.0488865;ClusterMaxEditDist=0.214744;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=903;DistBack=6727;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=168;REFWIDENED=16:7196996-7197163;PctSeqSimilarity=0.9968;PctSizeSimilarity=1;PctRecOverlap=0.948;SizeDiff=0;StartDistance=-47;EndDistance=-47;GTMatch=0;TruScore=98;MatchId=1986.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:0:24:1:27:./.:0:2:0:1:1/1:0:8:0/1:15:115:.:961:.
chr16	7435956	HG2_PB_SVrefine2PB10Xhap12_11468	T	TTTATTTATTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGGGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3844:HG2_PB_PB10Xdip_12418:HG2_PB_SVrefine2PB10Xhap12_11468:HG2_PB_SVrefine2Falcon1plusDovetail_4101;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11468;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00132286;ClusterMaxSizeDiff=0.00115731;ClusterMaxEditDist=0.00446465;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6051;DistBack=44158;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=16:7435957-7435971;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.9993;PctRecOverlap=0.9993;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1987.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:50:1|0:1:43:24:0:./.:15:0:1:5:0/1:16:17:0/1:180:700:.:5973:.
chr16	7733012	HG3_Ill_MetaSV_1854	G	GTGTATATATACACACACACACACATATATACGTATATATATGTGTGTGTGTATATATACACACACACATATATACGTATATATGTGTGTGTGTGTATATATATATATATATA	20	PASS	ClusterIDs=HG2_PB_pbsv_15877:HG4_PB_assemblyticsfalcon_9299:HG3_PB_assemblyticsfalcon_9444:HG2_PB_assemblyticsPBcR_9138:HG3_PB_HySA_23962:HG3_Ill_SVrefine2DISCOVARDovetail_11346:HG3_PB_SVrefine2PBcRDovetail_7487:HG3_PB_SVrefine2Falcon1Dovetail_9633:HG4_PB_SVrefine2PBcRDovetail_7867:HG2_PB_SVrefine2PB10Xhap12_11469:HG2_Ill_SVrefine2DISCOVARplusDovetail_4522:HG2_Ill_MetaSV_1746:HG2_PB_SVrefine2Falcon1plusDovetail_4102:HG4_PB_SVrefine2Falcon1Dovetail_9660:HG3_Ill_Spiral_16299:HG3_Ill_MetaSV_1854:HG3_Ill_GATKHCSBGrefine_10384:HG2_PB_SVrefine2PBcRplusDovetail_3845:HG2_Ill_GATKHCSBGrefine_10460:HG2_10X_SVrefine210Xhap12_10976:HG4_Ill_GATKHC_25103:HG2_PB_HySA_28890:HG2_PB_PB10Xdip_12421:HG4_Ill_SVrefine2DISCOVARDovetail_11160:HG4_Ill_Krunchall_21656:HG4_Ill_250bpfermikitraw_20659:HG4_Ill_150bpfermikitraw_19901:HG2_PB_PB10Xdip_12422:HG4_PB_pbsv_15792;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10976:HG2_Ill_GATKHCSBGrefine_10460:HG2_PB_SVrefine2PBcRplusDovetail_3845:HG3_Ill_GATKHCSBGrefine_10384:HG3_Ill_MetaSV_1854:HG3_Ill_Spiral_16299;NumExactMatchSVs=6;ClusterMaxShiftDist=0.272727;ClusterMaxSizeDiff=0.272727;ClusterMaxEditDist=0.312236;PBcalls=16;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=112;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=16:7733013-7733020;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1988.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:82:1/1:2:40:0:28:./.:1:15:0:6:1/1:0:23:./.:.:.:.:.:.
chr16	7925170	HG3_Ill_GATKHCSBGrefine_10385	A	ACTCACTCATACCTTCCCTTTTATGGCAGTCTTCCCTATTATTGTAAAAACTTGTTGAAGAAAAGCATCATTTGGCTCAGCGAAAATATTAACTGTAGCAATGGAAAGATAAACCATTTAAAAACATGGTTTATCTTTCCATTGCTACAGTTAATATTTTCGCTGAGCCAAATGATGCTTTTCTTCAACAAGTTTTTACAATAATAGGGAAGACTGCCATAAAAGGGAAGGTATGAGTGAGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATTGCAAGAACAAAAAACCAAACACCGCATATT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9634:HG3_PB_pbsv_15530:HG2_PB_pbsv_15878:HG4_PB_pbsv_15793:HG4_PB_assemblyticsfalcon_9300:HG2_PB_assemblyticsPBcR_9139:HG3_PB_assemblyticsfalcon_9445:HG2_PB_PB10Xdip_12424:HG2_PB_PB10Xdip_12423:HG4_PB_SVrefine2Falcon1Dovetail_9661:HG3_Ill_SVrefine2DISCOVARDovetail_11347:HG3_Ill_MetaSV_1855:HG3_Ill_GATKHCSBGrefine_10385:HG2_Ill_MetaSV_1747:HG2_Ill_GATKHCSBGrefine_10461:HG2_PB_SVrefine2PBcRplusDovetail_3846:HG2_PB_SVrefine2PB10Xhap12_11470:HG4_PB_SVrefine2PBcRDovetail_7868:HG2_PB_SVrefine2Falcon1plusDovetail_4103:HG2_Ill_manta_4331:HG4_Ill_SVrefine2DISCOVARDovetail_11161:HG4_Ill_GATKHCSBGrefine_10827:HG3_PB_SVrefine2PBcRDovetail_7488;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10461:HG2_Ill_MetaSV_1747:HG3_Ill_GATKHCSBGrefine_10385:HG3_Ill_MetaSV_1855:HG3_Ill_SVrefine2DISCOVARDovetail_11347;NumExactMatchSVs=5;ClusterMaxShiftDist=0.124006;ClusterMaxSizeDiff=0.124006;ClusterMaxEditDist=0.18442;PBcalls=15;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=311;DistBack=115895;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=16:7925171-7925180;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1989.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:31:0:17:1/1:0:7:0:9:1/1:0:11:1/1:2:49:.:.:.
chr16	8418179	HG3_PB_SVrefine2PBcRDovetail_7492	C	CAAGAAGCTAACATAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGATGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGGACCCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11473:HG3_PB_pbsv_15536:HG4_PB_pbsv_15797:HG2_PB_pbsv_15882:HG2_PB_PB10Xdip_12631:HG4_PB_assemblyticsfalcon_9307:HG3_PB_assemblyticsfalcon_9454:HG3_PB_HySA_23971:HG4_PB_HySA_23063:HG4_Ill_GATKHCSBGrefine_10830:HG3_Ill_MetaSV_1857:HG4_PB_SVrefine2Falcon1Dovetail_9664:HG4_Ill_MetaSV_1805:HG3_PB_SVrefine2PBcRDovetail_7492:HG3_Ill_SVrefine2DISCOVARDovetail_11352:HG2_Ill_MetaSV_1749:HG3_PB_SVrefine2Falcon1Dovetail_9638:HG2_Ill_breakscan11_4661;NumClusterSVs=18;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_7492:HG4_Ill_MetaSV_1805:HG4_PB_SVrefine2Falcon1Dovetail_9664;NumExactMatchSVs=3;ClusterMaxShiftDist=0.182965;ClusterMaxSizeDiff=0.182965;ClusterMaxEditDist=0.197368;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=311;DistBack=3882;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=16:8418180-8418196;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9968;PctRecOverlap=0.9936;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1990.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:32:0|1:36:0:2:25:./.:16:0:0:4:0/1:23:14:0/1:5:17:.:.:.
chr16	8535493	HG2_PB_PB10Xdip_12633	T	AGAAACATCCTGAGAACACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_12633:HG4_PB_assemblyticsfalcon_9309:HG4_PB_pbsv_15798:HG2_PB_pbsv_15883:HG2_PB_assemblyticsPBcR_9143:HG4_PB_SVrefine2PBcRDovetail_7871:HG3_PB_pbsv_15538:HG2_PB_SVrefine2PB10Xhap12_11474:HG2_10X_SVrefine210Xhap12_10978:HG2_PB_SVrefine2PBcRplusDovetail_3849:HG2_PB_SVrefine2Falcon1plusDovetail_4106:HG4_PB_SVrefine2Falcon1Dovetail_9665:HG4_PB_HySA_23064:HG2_Ill_breakscan11_4662:HG2_PB_HySA_28901:HG2_PB_PB10Xdip_12632;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_12633;NumExactMatchSVs=1;ClusterMaxShiftDist=0.141479;ClusterMaxSizeDiff=0.141479;ClusterMaxEditDist=0.243021;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=319;DistBack=6594;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=16:8535494-8535492;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9937;PctRecOverlap=0.9937;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=1991.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:67:1/1:2:18:0:35:./.:2:10:0:5:1/1:0:18:1/1:1:79:.:.:.
chr16	8831848	HG2_Ill_GATKHCSBGrefine_10467	G	GAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	10	PASS	ClusterIDs=HG4_Ill_150bpfermikitraw_19917:HG2_Ill_GATKHC_25194:HG2_Ill_GATKHCSBGrefine_10467:HG2_Ill_manta_4334;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10467:HG2_Ill_GATKHC_25194;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0884956;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.123894;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=53;DistBack=1;DistForward=5431;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=16:8831847-8831849;PctSeqSimilarity=0.9643;PctSizeSimilarity=0.9298;PctRecOverlap=0.9298;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=1992.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:20:./.:30:12:8:8:./.:12:1:2:13:0/1:12:13:./.:.:.:.:.:.
chr16	9045123	HG3_Ill_Spiral_16316	T	TCTGTCAGGGAAAGAGGCCCACATGGAAAATATTCAAAATATGCCACAAAAACAATAAATACCACACAGCCAGCTACAAGTTAATGAAGCAAGGAGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4664:HG4_PB_HySA_23076:HG4_PB_pbsv_15802:HG3_PB_pbsv_15542:HG2_PB_PB10Xdip_12877:HG4_PB_assemblyticsfalcon_9320:HG3_PB_assemblyticsfalcon_9469:HG3_PB_HySA_23982:HG4_PB_SVrefine2PBcRDovetail_7874:HG4_PB_SVrefine2Falcon1Dovetail_9668:HG4_Ill_svaba_19650:HG4_Ill_manta_3678:HG4_Ill_SVrefine2DISCOVARDovetail_11168:HG4_Ill_Krunchall_21680:HG4_Ill_GATKHC_25127:HG4_Ill_GATKHCSBGrefine_10832:HG4_Ill_Cortex_1263:HG4_Ill_250bpfermikitraw_20680:HG4_Ill_150bpfermikitraw_19921:HG3_PB_SVrefine2PBcRDovetail_7495:HG3_PB_SVrefine2Falcon1Dovetail_9643:HG3_Ill_svaba_19836:HG3_Ill_manta_3535:HG3_Ill_Spiral_16316:HG3_Ill_SVrefine2DISCOVARDovetail_11355:HG3_Ill_Krunchall_20945:HG3_Ill_GATKHC_25048:HG3_Ill_GATKHCSBGrefine_10392:HG3_Ill_Cortex_1317:HG3_Ill_250bpfermikitraw_20411:HG3_Ill_150bpfermikitraw_19869:HG2_PB_SVrefine2PBcRplusDovetail_3852:HG2_PB_SVrefine2PB10Xhap12_11477:HG2_PB_SVrefine2Falcon1plusDovetail_4109:HG2_Ill_svaba_19673:HG2_Ill_manta_4335:HG2_Ill_SpiralSDKrefine_5902:HG2_Ill_SVrefine2DISCOVARplusDovetail_4528:HG2_Ill_Krunchall_21342:HG2_Ill_GATKHC_25198:HG2_Ill_GATKHCSBGrefine_10468:HG2_Ill_Cortex_3081:HG2_Ill_250bpfermikitraw_20989:HG2_Ill_150bpfermikitraw_19811:HG2_10X_SVrefine210Xhap12_10981;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10981:HG2_Ill_150bpfermikitraw_19811:HG2_Ill_250bpfermikitraw_20989:HG2_Ill_Cortex_3081:HG2_Ill_GATKHCSBGrefine_10468:HG2_Ill_GATKHC_25198:HG2_Ill_Krunchall_21342:HG2_Ill_SVrefine2DISCOVARplusDovetail_4528:HG2_Ill_SpiralSDKrefine_5902:HG2_Ill_manta_4335:HG2_Ill_svaba_19673:HG2_PB_SVrefine2Falcon1plusDovetail_4109:HG2_PB_SVrefine2PB10Xhap12_11477:HG2_PB_SVrefine2PBcRplusDovetail_3852:HG3_Ill_150bpfermikitraw_19869:HG3_Ill_250bpfermikitraw_20411:HG3_Ill_Cortex_1317:HG3_Ill_GATKHCSBGrefine_10392:HG3_Ill_GATKHC_25048:HG3_Ill_Krunchall_20945:HG3_Ill_SVrefine2DISCOVARDovetail_11355:HG3_Ill_Spiral_16316:HG3_Ill_manta_3535:HG3_Ill_svaba_19836:HG3_PB_SVrefine2Falcon1Dovetail_9643:HG3_PB_SVrefine2PBcRDovetail_7495:HG4_Ill_150bpfermikitraw_19921:HG4_Ill_250bpfermikitraw_20680:HG4_Ill_Cortex_1263:HG4_Ill_GATKHCSBGrefine_10832:HG4_Ill_GATKHC_25127:HG4_Ill_Krunchall_21680:HG4_Ill_SVrefine2DISCOVARDovetail_11168:HG4_Ill_manta_3678:HG4_Ill_svaba_19650:HG4_PB_SVrefine2Falcon1Dovetail_9668:HG4_PB_SVrefine2PBcRDovetail_7874;NumExactMatchSVs=37;ClusterMaxShiftDist=0.148515;ClusterMaxSizeDiff=0.148515;ClusterMaxEditDist=0.173077;PBcalls=14;Illcalls=30;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=29;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=15;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=96;DistBack=2;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=16:9045124-9045126;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1993.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:56:1/1:3:25:2:18:1/1:0:17:0:28:1/1:0:49:./.:.:.:.:.:.
chr16	9234462	HG2_10X_SVrefine210Xhap12_10983	T	TGACTTCAGGTAATCTATCTGCCTCAGCCATCTAAAGTGCTGGGATTACAGGTGTGAGCCACTGCACCCAGCTCATAGAATCTTTTTTATGTTTTATTTAGGCCACTGTCATTTTGGGTCTCTGTGACCTGTAGTTGAACTTAATCCTAATAATGCACTAATAGCTTTCTCCAGAAGATTAAATGAGATACTGTGTGCAACTTGCCTATTGCAGTCATGACATATTGTAAACACTCAGTAAAAGCTAGCTTTTTATTATTAGCTTATCTAGCATCATGTTATAATAACTGTCCCTTAGTCCCAATGAAAACTCTAGGGATGAGTTCTGGAAAAAAGAAAAGATCAAGCAGCTGGGCACGGCTGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCATGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGCTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTGGCACGCGCCTGTATTCCCAGCTTCTCAGGAGGCTGAGGCAGGA	20	PASS	ClusterIDs=HG2_PB_pbsv_15891:HG2_PB_PB10Xdip_12878:HG4_PB_pbsv_15804:HG3_PB_SVrefine2Falcon1Dovetail_9646:HG2_PB_assemblyticsPBcR_9157:HG4_PB_assemblyticsfalcon_9323:HG2_PB_HySA_28920:HG4_PB_HySA_23080:HG3_PB_assemblyticsfalcon_9472:HG4_Ill_SVrefine2DISCOVARDovetail_11170:HG4_Ill_MetaSV_1807:HG4_Ill_GATKHCSBGrefine_10833:HG2_PB_SVrefine2PBcRplusDovetail_3854:HG2_Ill_SVrefine2DISCOVARplusDovetail_4531:HG2_Ill_GATKHCSBGrefine_10469:HG2_10X_SVrefine210Xhap12_10983:HG4_PB_SVrefine2PBcRDovetail_7876:HG4_PB_SVrefine2Falcon1Dovetail_9671:HG2_PB_SVrefine2Falcon1plusDovetail_4111:HG2_PB_SVrefine2PB10Xhap12_11479;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10983:HG2_Ill_GATKHCSBGrefine_10469:HG2_Ill_SVrefine2DISCOVARplusDovetail_4531:HG2_PB_SVrefine2PBcRplusDovetail_3854:HG4_Ill_GATKHCSBGrefine_10833:HG4_Ill_MetaSV_1807:HG4_Ill_SVrefine2DISCOVARDovetail_11170;NumExactMatchSVs=7;ClusterMaxShiftDist=0.115094;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.149057;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=538;DistBack=-1;DistForward=4;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=16:9234463-9234464;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1994.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:23:0|1:35:0:0:20:./.:32:0:0:4:0/1:18:5:0/1:8:42:.:.:.
chr16	9667586	HG4_PB_SVrefine2PBcRDovetail_7877	A	ACACGTTGAGATGACTGCAAGCTGGGAAGAGAGCCTTCACCAGGAGCTGAATTTGCTGGTAGTTTGATCTTGAAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9648:HG3_PB_pbsv_15548:HG3_PB_HySA_23989:HG2_PB_HySA_28929:HG2_PB_pbsv_15893:HG4_PB_HySA_23091:HG4_PB_pbsv_15807:HG4_Ill_250bpfermikitraw_20690:HG3_Ill_250bpfermikitraw_20421:HG2_Ill_250bpfermikitraw_21000:HG4_PB_SVrefine2PBcRDovetail_7877:HG4_PB_SVrefine2Falcon1Dovetail_9672;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9648:HG4_PB_SVrefine2PBcRDovetail_7877:HG4_PB_SVrefine2Falcon1Dovetail_9672;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0522876;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.272727;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=15201;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=149;REFWIDENED=16:9667587-9667735;PctSeqSimilarity=0.9937;PctSizeSimilarity=1;PctRecOverlap=0.9467;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=1995.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:27:./.:9:21:17:5:./.:13:3:10:0:0/1:30:19:./.:.:.:.:.:.
chr16	10133859	HG2_Ill_manta_4339	C	CACACACATCCACACTATACATACACGCTCGCAACTTCGCACGCTCACAGTGCACACACACCCACAAACACACCCAACACACACATCCACACCACGCAAATACACTGCACACACACGCAACACAACCATACCACACACACAAATACACAACACACACATCTACACCATACACACTCGCAACTTCACACTCACAGTGCACACGCGCACACCCACAAATGCACCCAATACACACATCTACACCAAGCACACAAATAAACTACACACAGAACATACATCCACACAATACACAACACACACACAACTTCACAGTGCACACGCACTCACCCACAAACATACCCAACACATACGTCCACACCACACACACAAATACACCACACACATCCACACCACACACACAAATACACCACACACATCCACACCACACACACAAATACACTACACACACATCCACACCACACACAAATACACAACACACACATCCACACACCACACACACAAATACGCTACACACATCCACACACCACACAAATACACCACACCATCCACACACCACACACACAAATACACACCATCCACACCACACACAAATACACAACACACACATCCACACCACACACACAAATACACAACACACAACACACACATCCACACCACACACATACACTACACACATCCCCACCACACACACAAATACACTACACACATCCCCATCACACACACAAATACACTACACACATCCACACCACACACAAATACACT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9674:HG3_PB_pbsv_15551:HG2_PB_pbsv_15896:HG2_Ill_breakscan11_4665:HG4_PB_pbsv_15811:HG2_Ill_MetaSV_1754:HG4_Ill_GATKHCSBGrefine_10836:HG3_Ill_GATKHCSBGrefine_10394:HG2_Ill_manta_4339:HG4_Ill_MetaSV_1808:HG4_PB_HySA_23093:HG2_PB_PB10Xdip_11214:HG3_PB_assemblyticsfalcon_9484:HG2_PB_assemblyticsPBcR_9166:HG4_PB_assemblyticsfalcon_9333:HG4_PB_SVrefine2PBcRDovetail_7879:HG3_PB_SVrefine2Falcon1Dovetail_9650:HG4_Ill_SVrefine2DISCOVARDovetail_11177:HG3_PB_SVrefine2PBcRDovetail_7499:HG2_Ill_SVrefine2DISCOVARplusDovetail_4538:HG3_Ill_SVrefine2DISCOVARDovetail_11357:HG2_PB_SVrefine2PBcRplusDovetail_3857:HG2_PB_SVrefine2PB10Xhap12_11482:HG2_PB_SVrefine2Falcon1plusDovetail_4113;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_manta_4339:HG3_Ill_GATKHCSBGrefine_10394:HG4_Ill_GATKHCSBGrefine_10836;NumExactMatchSVs=3;ClusterMaxShiftDist=0.24186;ClusterMaxSizeDiff=0.24186;ClusterMaxEditDist=0.298928;PBcalls=15;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=758;DistBack=13;DistForward=14;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=16:10133816-10133873;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1997.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:76:1/1:2:27:2:30:./.:46:837:40:766:./.:0:5:1/1:2:196:.:.:.
chr16	10777177	HG2_Ill_manta_4342	G	GTCAGGGCCTAGGTGGAGTCAGGGACTAGGTGAAGACAGGGATTGGGTGGGT	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_11181:HG4_Ill_svaba_19667:HG3_PB_pbsv_15557:HG4_PB_pbsv_15818:HG4_Ill_scalpel_14526:HG2_PB_pbsv_15903:HG4_Ill_manta_3682:HG4_Ill_Krunchall_21694:HG4_Ill_GATKHC_25147:HG4_Ill_GATKHCSBGrefine_10838:HG4_Ill_FB_13505:HG4_Ill_250bpfermikitraw_20697:HG4_Ill_150bpfermikitraw_19934:HG3_Ill_svaba_19853:HG3_Ill_Spiral_16327:HG3_Ill_Krunchall_20963:HG3_Ill_GATKHC_25070:HG3_Ill_GATKHCSBGrefine_10398:HG3_Ill_250bpfermikitraw_20428:HG2_Ill_svaba_19691:HG2_Ill_manta_4342:HG2_Ill_SpiralSDKrefine_5917:HG2_Ill_Krunchall_21363:HG2_Ill_GATKHC_25224:HG2_Ill_GATKHCSBGrefine_10475:HG2_Ill_250bpfermikitraw_21011:HG4_PB_HySA_23098:HG2_PB_HySA_28941:HG4_PB_SVrefine2PBcRDovetail_7882:HG4_PB_SVrefine2Falcon1Dovetail_9676;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21011:HG2_Ill_GATKHCSBGrefine_10475:HG2_Ill_GATKHC_25224:HG2_Ill_Krunchall_21363:HG2_Ill_SpiralSDKrefine_5917:HG2_Ill_manta_4342:HG2_Ill_svaba_19691:HG3_Ill_250bpfermikitraw_20428:HG3_Ill_GATKHCSBGrefine_10398:HG3_Ill_GATKHC_25070:HG3_Ill_Krunchall_20963:HG3_Ill_Spiral_16327:HG3_Ill_svaba_19853:HG4_Ill_150bpfermikitraw_19934:HG4_Ill_250bpfermikitraw_20697:HG4_Ill_FB_13505:HG4_Ill_GATKHCSBGrefine_10838:HG4_Ill_GATKHC_25147:HG4_Ill_Krunchall_21694:HG4_Ill_manta_3682:HG4_Ill_scalpel_14526:HG4_Ill_svaba_19667;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0761905;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.304762;PBcalls=7;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=14;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=-1;DistForward=8;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=117;REFWIDENED=16:10777127-10777243;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1999.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:39:0|1:27:3:2:36:./.:3:20:12:0:0/1:20:15:./.:.:.:.:.:.
chr16	10977986	HG3_PB_SVrefine2Falcon1Dovetail_9657	TG	CCCCTAAAGATCCCCATGCTCTGTCTATTCATCCCTCCCTCTCTCCCCCATAACCCTGGGCAACCCCGACCTTTTATCTCCATCATTTTGCCTTTTTCAGAGAAATAGCTGGAGACATACGGTATGTGCCTCTTCAGATTGGCTTCTTTCACTTGGTGGAGTTGTGTTTTTATTGTTTTTAATTATTTTCATGTATTTATTTATTTGTTGAGACAGGGTCTCAGTCTGTCACCCAGGCTGGAGCGCGGTGGCACAACCACAGCTCATGCAGCCTTGACGACCTCTCCAGGCTCAAGTGATCCTCCCGCCTCAGCCTTCTGAGTAGCTGGGACTACAGATGCACACTACCACGCCCAGCTAATTTTGTATTTTTTGTAGAGACGGGGTTTTGCCATGATGACCATGCTGCTCTCGAACTCCTGGGCTCAAGTGATCTATCCACCCACCTCGCCTCCCAAAGTCCTAGGATTACAGGCATGAGCCACCACGCCCAGGCTGAGCTGTGTTTTAAATTGTACTCTGTACAGCTTATTTCAGGCAAGAGAGGTTTCAAGGACAGAATTGAATCCTGCCTCTCCTTGCCCAATACCCATCCCTTCCAAGCCATCATCTTTCCAGAAGTCAGAGCTAGAAGGGACCTGAAAAGGGCCTCTAAGCCACAGATGTCAAACCCAAGAACCAAAAAGGCTTAATGGCGAGAAATGTGTCCAGCAGAAGGCAATAGGGAGTAATGGAGCCTCTGGCAATCCTATTTAACCACAGCGCTCTCTCTTCACCTGTTCAGGAAGTTAGGATCCATGTAAAAGTTCATCTGAAAACCACTGTTCTTGTGTGACCCTCTTATTTTAACACATGAGGGCCCTGGGGACCAGAGAGGGGAACGGGCTTGTGCAAAGTCACACAGCCTCTCAGAAGCAGGAGCAGTGCCCAGATCTCAGGTCTCATGACTCCTGGGTCAATTCCATCCCACTAGGCTATTGTAACACCGCCATTTCCA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1755:HG2_PB_pbsv_15906:HG2_PB_SVrefine2PB10Xhap12_11488:HG2_PB_SVrefine2Falcon1plusDovetail_4116:HG3_PB_assemblyticsfalcon_9496:HG3_PB_SVrefine2Falcon1Dovetail_9657:HG2_Ill_SVrefine2DISCOVARplusDovetail_4541:HG2_10X_SVrefine210Xhap12_10993:HG3_Ill_Spiral_16331:HG3_Ill_MetaSV_1863;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9657:HG3_PB_assemblyticsfalcon_9496;NumExactMatchSVs=2;ClusterMaxShiftDist=0.124486;ClusterMaxSizeDiff=0.123457;ClusterMaxEditDist=0.188272;PBcalls=5;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=995;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=16:10977988-10977985;PctSeqSimilarity=0.991;PctSizeSimilarity=0.9881;PctRecOverlap=0.9891;SizeDiff=-12;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=2001.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:105:./.:25:25:7:32:0|1:30:0:0:21:0/1:30:35:0/1:38:78:.:.:.
chr16	11086392	HG2_Ill_manta_4343	T	TAAAAAATAAAAAAGAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGCGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAATA	20	PASS	ClusterIDs=HG2_PB_HySA_28946:HG2_PB_pbsv_15907:HG4_PB_pbsv_15819:HG2_PB_PB10Xdip_11222:HG3_PB_pbsv_15562:HG4_Ill_manta_3683:HG2_PB_assemblyticsPBcR_9179:HG4_PB_assemblyticsfalcon_9342:HG3_PB_assemblyticsfalcon_9497:HG4_Ill_MetaSV_1809:HG4_Ill_GATKHCSBGrefine_10839:HG3_Ill_MetaSV_1864:HG3_Ill_GATKHCSBGrefine_10400:HG2_PB_SVrefine2PBcRplusDovetail_3862:HG2_PB_SVrefine2PB10Xhap12_11489:HG2_PB_SVrefine2Falcon1plusDovetail_4117:HG2_Ill_manta_4343:HG2_Ill_MetaSV_1756:HG2_Ill_GATKHCSBGrefine_10476:HG2_10X_SVrefine210Xhap12_10994:HG4_PB_SVrefine2PBcRDovetail_7883:HG4_PB_SVrefine2Falcon1Dovetail_9678:HG3_PB_SVrefine2Falcon1Dovetail_9658:HG4_PB_HySA_23103;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10994:HG2_Ill_GATKHCSBGrefine_10476:HG2_Ill_MetaSV_1756:HG2_Ill_manta_4343:HG2_PB_SVrefine2Falcon1plusDovetail_4117:HG2_PB_SVrefine2PB10Xhap12_11489:HG2_PB_SVrefine2PBcRplusDovetail_3862:HG3_Ill_GATKHCSBGrefine_10400:HG3_Ill_MetaSV_1864:HG4_Ill_GATKHCSBGrefine_10839:HG4_Ill_MetaSV_1809:HG4_Ill_manta_3683;NumExactMatchSVs=12;ClusterMaxShiftDist=0.167987;ClusterMaxSizeDiff=0.167987;ClusterMaxEditDist=0.228571;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=315;DistBack=78592;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=16:11086393-11086408;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2002.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:67:1/1:3:13:0:13:./.:0:5:0:2:1/1:0:30:1/1:2:74:.:.:.
chr16	12546227	HG3_Ill_150bpfermikitraw_19899	A	ACGAAGACTTATCGAGCCCCAAATGTCAGTAGTGCTGTGACTGAGAAAACCTCAAGTAGAGAAAACTGTGGGGTATCTGGAGCT	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_9519:HG4_Ill_Cortex_1269:HG3_Ill_Cortex_1322:HG2_Ill_Cortex_3097:HG2_PB_PB10Xdip_11229:HG2_PB_pbsv_15916:HG3_PB_HySA_24015:HG4_PB_pbsv_15828:HG4_Ill_svaba_19687:HG2_PB_HySA_28960:HG4_Ill_manta_3685:HG4_Ill_Krunchall_21712:HG4_Ill_GATKHCSBGrefine_10842:HG4_Ill_250bpfermikitraw_20714:HG4_Ill_150bpfermikitraw_19948:HG3_PB_assemblyticsfalcon_9511:HG3_Ill_svaba_19872:HG3_Ill_manta_3539:HG3_Ill_Spiral_16345:HG3_Ill_Krunchall_20986:HG3_Ill_GATKHC_25092:HG3_Ill_GATKHCSBGrefine_10404:HG3_Ill_250bpfermikitraw_20447:HG3_Ill_150bpfermikitraw_19899:HG2_PB_assemblyticsPBcR_9193:HG2_Ill_svaba_19714:HG2_Ill_manta_4345:HG2_Ill_SpiralSDKrefine_5932:HG2_Ill_Krunchall_21388:HG2_Ill_GATKHC_25250:HG2_Ill_GATKHCSBGrefine_10480:HG2_Ill_250bpfermikitraw_21031:HG2_Ill_150bpfermikitraw_19846:HG3_PB_pbsv_15570;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19846:HG2_Ill_250bpfermikitraw_21031:HG2_Ill_GATKHCSBGrefine_10480:HG2_Ill_GATKHC_25250:HG2_Ill_Krunchall_21388:HG2_Ill_SpiralSDKrefine_5932:HG2_Ill_manta_4345:HG2_Ill_svaba_19714:HG2_PB_assemblyticsPBcR_9193:HG3_Ill_150bpfermikitraw_19899:HG3_Ill_250bpfermikitraw_20447:HG3_Ill_GATKHCSBGrefine_10404:HG3_Ill_GATKHC_25092:HG3_Ill_Krunchall_20986:HG3_Ill_Spiral_16345:HG3_Ill_manta_3539:HG3_Ill_svaba_19872:HG3_PB_assemblyticsfalcon_9511:HG4_Ill_150bpfermikitraw_19948:HG4_Ill_250bpfermikitraw_20714:HG4_Ill_GATKHCSBGrefine_10842:HG4_Ill_Krunchall_21712:HG4_Ill_manta_3685:HG4_Ill_svaba_19687;NumExactMatchSVs=24;ClusterMaxShiftDist=0.106509;ClusterMaxSizeDiff=0.0828402;ClusterMaxEditDist=0.278788;PBcalls=9;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=83;DistBack=8082;DistForward=24006;DistMin=8082;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=16:12546226-12546228;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2003.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:14:45:./.:11:23:2:18:1/1:1:36:0:24:1/1:0:47:./.:.:.:.:.:.
chr16	13774131	HG3_Ill_SVrefine2DISCOVARDovetail_11375	T	TGACTCTGAATGGCAGCTCATGTGAGAAAACAATGACTCATCAAACAACTGTTGGGGGAAAAAAAGATCAGAGAGTCTATTACAGCATAAAATTAAAATTGGCCAATAGTACCTATCCCACCACAGCCACCAAGGTGGTAATCTAGTCTATTGTGAATATTAAATGGATAAAAAGTTAACCTTTATCTGCTGCAGCTGAGAGGGATGCTTAATAGTGTTACACAGGAAGTGACACAGTGGGGGAGCCTTTTGAGCTTGGACATGCCGACAATTATCTTTCCTGCCTCCAAGGAATAGAAATGAAAAGTCCTCTTCCTTTCACCAAAGCTCAAACAGAATATAGGACAGTGGAATAGTCTATATTCTGTAGAATATAGAAACAGAATATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4125:HG2_PB_pbsv_15919:HG3_PB_pbsv_15577:HG3_PB_SVrefine2PBcRDovetail_7515:HG3_Ill_Spiral_16358:HG2_Ill_Spiral_1045:HG3_PB_HySA_24026:HG2_PB_HySA_28973:HG3_Ill_GATKHCSBGrefine_10410:HG2_Ill_GATKHCSBGrefine_10482:HG3_PB_SVrefine2PBcRDovetail_7514:HG3_Ill_SVrefine2DISCOVARDovetail_11375:HG2_Ill_SVrefine2DISCOVARplusDovetail_4550;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4550:HG3_Ill_SVrefine2DISCOVARDovetail_11375:HG3_PB_SVrefine2PBcRDovetail_7514;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0552764;ClusterMaxSizeDiff=0.0502513;ClusterMaxEditDist=0.209596;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=388;DistBack=34688;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=339;REFWIDENED=16:13774132-13774470;PctSeqSimilarity=0.9753;PctSizeSimilarity=0.9798;PctRecOverlap=0.4005;SizeDiff=-8;StartDistance=-234;EndDistance=-234;GTMatch=0;TruScore=78;MatchId=2004.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:34:62:0|1:33:3:0:37:./.:2:0:0:38:0/1:8:10:./.:3:30:.:.:.
chr16	17564778	HG2_Ill_GATKHCSBGrefine_10503	C	CCGCCGCCTCGGCTCGCCGCTGCTCCTCCTCCGCCGCCGCCGCCGCCGCTGCCGCCGCCGCCGCCGCCGCCTCCACCGCCGCGGCGCGGAGTTTTCAGACGGGCAGGGACCCGGACGTCACCAGGAGGAGGAGAAGGCGGGAGGCGGGAGCGGGGAGGCCGCGGAGGGGGGCGCCGGGCGCGCGCTCGGGGACGGGGCGCGCAGGGAGGGGCGGGCGCCTGGCCCGCGCGGCG	20	PASS	ClusterIDs=HG2_PB_pbsv_15943:HG2_PB_assemblyticsPBcR_9226:HG3_PB_pbsv_15598:HG3_PB_assemblyticsfalcon_9544:HG2_PB_assemblyticsfalcon_9557:HG2_PB_PB10Xdip_11271:HG4_Ill_MetaSV_1816:HG4_Ill_GATKHCSBGrefine_10861:HG3_Ill_manta_3547:HG3_Ill_GATKHCSBGrefine_10429:HG2_PB_SVrefine2PBcRplusDovetail_3885:HG2_PB_SVrefine2PB10Xhap12_11519:HG2_Ill_SVrefine2DISCOVARplusDovetail_4567:HG2_Ill_MetaSV_1765:HG2_Ill_GATKHCSBGrefine_10503:HG3_Ill_MetaSV_1874:HG2_Ill_manta_4353:HG3_PB_SVrefine2Falcon1Dovetail_9684:HG2_PB_SVrefine2Falcon1plusDovetail_4137:HG4_PB_HySA_23143:HG4_PB_assemblyticsfalcon_9390:HG4_PB_pbsv_15853;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10503:HG2_Ill_MetaSV_1765:HG2_Ill_SVrefine2DISCOVARplusDovetail_4567:HG2_PB_SVrefine2PB10Xhap12_11519:HG2_PB_SVrefine2PBcRplusDovetail_3885:HG3_Ill_GATKHCSBGrefine_10429:HG3_Ill_manta_3547:HG4_Ill_GATKHCSBGrefine_10861:HG4_Ill_MetaSV_1816;NumExactMatchSVs=9;ClusterMaxShiftDist=0.12931;ClusterMaxSizeDiff=0.12931;ClusterMaxEditDist=0.223629;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=232;DistBack=-1;DistForward=34682;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=16:17564779-17564779;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2005.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:21:0:24:./.:0:4:0:3:1/1:0:14:./.:.:.:.:.:.
chr16	18950691	HG3_PB_pbsv_15607	T	TTTAAGGCCGGGCGCGTGGCTACGCCTGTAATCCGCATGCACTTTGGGAGGCCGGGGAGGGCGGGCGATCACGAAGGTCAGGAGATCGGACCATCCCGGCTAAAACGGTGAAACCCCCGGTCTCTACTAAAATACAAAAATTAGCAGGGCGTAGTGGCGGGCGCGCTGGTAGTCCCTAGCTAACTTGGAGGCTGAGGCAGGAGAATGGCGTGGAACCCGGAGGAAAGGAGCCTTCAGTGAGCCGAGACTCCGCCACTGCACTCCAGGCTGGGCAACAAGCGAGACTTCCGTCTCAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAATGACCTGCAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3888:HG3_PB_pbsv_15607:HG2_PB_HySA_29025:HG2_PB_pbsv_15952;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_15607;NumExactMatchSVs=1;ClusterMaxShiftDist=0.133748;ClusterMaxSizeDiff=0.133748;ClusterMaxEditDist=0.190625;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=339;DistBack=0;DistForward=1;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=16:18950677-18950694;PctSeqSimilarity=0.9419;PctSizeSimilarity=0.9882;PctRecOverlap=0.9499;SizeDiff=4;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=95;MatchId=2006.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:16:26:./.:14:19:0:4:./.:12:0:2:5:./.:28:3:0/1:10:9:.:.:.
chr16	18960087	HG2_PB_SVrefine2PBcRplusDovetail_3889	T	TAGAAACCAGGTTTTGCGGCCGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_11279:HG4_PB_HySA_23163:HG3_PB_pbsv_15608:HG2_Ill_MetaSV_1768:HG2_PB_assemblyticsfalcon_9571:HG2_PB_pbsv_15953:HG3_PB_assemblyticsfalcon_9561:HG2_PB_HySA_29026:HG4_PB_pbsv_15861:HG3_PB_SVrefine2PBcRDovetail_7529:HG2_PB_SVrefine2Falcon1plusDovetail_4142:HG2_10X_SVrefine210Xhap12_11016:HG4_Ill_MetaSV_1819:HG2_PB_SVrefine2PBcRplusDovetail_3889:HG2_PB_SVrefine2PB10Xhap12_11528:HG2_PB_SVrefine2Falcon2Bionano_7852:HG2_Ill_GATKHCSBGrefine_10513:HG4_PB_SVrefine2PBcRDovetail_7897;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10513:HG2_PB_SVrefine2Falcon2Bionano_7852:HG2_PB_SVrefine2PB10Xhap12_11528:HG2_PB_SVrefine2PBcRplusDovetail_3889:HG4_Ill_MetaSV_1819;NumExactMatchSVs=5;ClusterMaxShiftDist=0.177253;ClusterMaxSizeDiff=0.177253;ClusterMaxEditDist=0.264256;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=331;DistBack=5988;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=16:18960088-18960103;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2007.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:1/1:0:17:0:9:1/1:0:7:0:7:1/1:0:18:1/1:1:58:.:.:.
chr16	19332991	HG3_Ill_GATKHCSBGrefine_10439	C	CTAGTCAGGTGGTCATAGAACCCAGATTCTAAAGAAGGGAACATAGAACCCTATCTCTTTCAATGGAAAGTGTGGCAAACAATTTGGGAGCCATGTTTGAAAACAGTCACGTGGGATAAACATGGACAAGGAGAGATGAGTGGGTTCTAACAGAGGTCCTGGCTGGGTGCAGTGGCTCATGCCTGTAATCTCAGCACTTTGGGAGGTCAAGGTGGGCAGATCACTTGTGTCTAGGAGTTCAAGACCAGCCTGGGCAACATAGCAAGACCCCATCTCTACAAAAAATGAAAATAAAAAATTATCTGGGCATGGTGGCATGCATCTGTAGGCCTAGCTACTCAGGAGGTCAGGACAGAAGGATCACTTGAGCCCAGGAATTTGAGGCTGCACGGAGCTATGATTGCACCACTTGTACTTCAGCTTGGGTGACAGAGTGAAAGCCCCATCTCTAAATAAATAAATAAAGAGAGGTCCTGATTCAGTTTATCAATCCCATGTAAACTAGAGAGAAAACAGCAGAAAATTTATGGGTGAAACCTTTGGTGATGGTTAATTTTTTGTCAGTTTGGCTAGGCCACAGTATTCGGATATTTGATCAAACACATCTGGATGTTGCTGTGTAGTTTT	20	PASS	ClusterIDs=HG3_PB_pbsv_15613:HG4_PB_pbsv_15865:HG2_PB_pbsv_15957:HG2_Ill_Spiral_1050:HG2_PB_PB10Xdip_11284:HG2_Ill_breakscan11_4669:HG3_PB_assemblyticsfalcon_9564:HG2_PB_assemblyticsfalcon_9575:HG4_PB_HySA_23167:HG2_PB_SVrefine2PBcRplusDovetail_3893:HG2_PB_SVrefine2PB10Xhap12_11532:HG4_Ill_SVrefine2DISCOVARDovetail_11209:HG4_Ill_MetaSV_1822:HG3_Ill_MetaSV_1877:HG2_10X_SVrefine210Xhap12_11020:HG4_PB_SVrefine2PBcRDovetail_7901:HG4_Ill_GATKHCSBGrefine_10873:HG3_Ill_SVrefine2DISCOVARDovetail_11392:HG3_Ill_GATKHCSBGrefine_10439:HG2_PB_SVrefine2Falcon2Bionano_7856:HG2_PB_SVrefine2Falcon1plusDovetail_4146:HG2_Ill_SVrefine2DISCOVARplusDovetail_4580:HG2_Ill_GATKHCSBGrefine_10517:HG4_PB_SVrefine2Falcon1Dovetail_9691;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10517:HG2_Ill_SVrefine2DISCOVARplusDovetail_4580:HG2_PB_SVrefine2Falcon1plusDovetail_4146:HG2_PB_SVrefine2Falcon2Bionano_7856:HG3_Ill_GATKHCSBGrefine_10439:HG3_Ill_SVrefine2DISCOVARDovetail_11392:HG4_Ill_GATKHCSBGrefine_10873:HG4_PB_SVrefine2PBcRDovetail_7901;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0517647;ClusterMaxSizeDiff=0.0486275;ClusterMaxEditDist=0.230769;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=626;DistBack=3930;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=16:19332992-19332993;PctSeqSimilarity=0.9992;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2008.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:56:1/1:2:27:1:22:1/1:0:27:0:18:1/1:0:20:1/1:4:98:.:.:.
chr16	20221624	HG2_Ill_Krunchall_21460	G	GGCCAAGCTGTGGGAACTGCTTTTGTCCTGTGGATAGATTGAAGCTTCTCCTTCTTTTCTGCATTTCTGTGGCTGGTTGTT	20	PASS	ClusterIDs=HG2_PB_pbsv_15962:HG4_Ill_250bpfermikitraw_20778:HG3_PB_pbsv_15617:HG4_Ill_150bpfermikitraw_20014:HG2_PB_PB10Xdip_11285:HG4_Ill_GATKHC_25260:HG4_Ill_GATKHCSBGrefine_10878:HG3_PB_assemblyticsfalcon_9570:HG3_Ill_Spiral_16399:HG3_Ill_GATKHC_25175:HG3_Ill_GATKHCSBGrefine_10444:HG2_PB_assemblyticsfalcon_9580:HG2_Ill_SpiralSDKrefine_5994:HG2_Ill_GATKHCSBGrefine_10522:HG3_Ill_manta_3551:HG4_PB_pbsv_15871:HG3_Ill_Krunchall_21059:HG3_Ill_250bpfermikitraw_20515:HG3_Ill_150bpfermikitraw_19965:HG2_Ill_manta_4358:HG2_Ill_Krunchall_21460:HG2_Ill_250bpfermikitraw_21101:HG2_Ill_150bpfermikitraw_19912:HG4_Ill_svaba_19757:HG4_Ill_manta_3698:HG4_Ill_Krunchall_21786:HG3_Ill_svaba_19944:HG2_Ill_svaba_19788:HG2_PB_HySA_29038;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19912:HG2_Ill_250bpfermikitraw_21101:HG2_Ill_Krunchall_21460:HG2_Ill_manta_4358:HG3_Ill_150bpfermikitraw_19965:HG3_Ill_250bpfermikitraw_20515:HG3_Ill_Krunchall_21059:HG3_Ill_manta_3551:HG4_Ill_150bpfermikitraw_20014:HG4_Ill_250bpfermikitraw_20778;NumExactMatchSVs=10;ClusterMaxShiftDist=0.180645;ClusterMaxSizeDiff=0.167742;ClusterMaxEditDist=0.35;PBcalls=7;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=80;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=16:20221623-20221625;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2009.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:71:1/1:2:19:2:36:1/1:1:35:0:39:1/1:0:42:./.:.:.:.:.:.
chr16	21231492	HG2_10X_SVrefine210Xhap12_11027	A	AGTCTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCATGGCAACCTCCGTCTTCCAGGTTCAAGAGATTCTCCGGTCTCAGCCTCCTGAGTGTCTGGGATTATAGACATGTGCCACCATGCCCAGCTAATGCTTTGTATTTTTAGTAGAGACGGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCACATGATCCGCCCGACTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCCCAGCTGAAAAGTTCTAAATAAAACTCATTTACATATAATGTTAACTAAAAAGTCATTTTCATACAGATGTTCACACAAATGACCCTATGGCTAAGTAGCTAGGGCAATGGTTACTCTTAGCAATGTAGCAGTAGATAGAGTATAAAAGTCCCAATCTTGTGCCCCTCTCTGTGCTCCCACCCTTTGTAATGTGCCTCTACAGTCAGCCTATTATACCACCACCACTGTAACCATAATAAGTCAGTTGCCCAATGCCCACAGCAAGTCAATACACTGAGACACTGGGTTGCAGCAGAGAAAGAGGTTTAATCATAGGGTCACCGAATGAAGAGATGGGAGGAAACCTCAAATCCGTCTCCCTGAGGAGTCAGTCTGGGGCTAGGGTTTTTAATGGTTTGGAATGGAGATCATTGATTGGTGGAGTACGGGAGTGAAGCCATGGGACAGGGAGATAAACTATTTTCATGGTGATCCCATTCCTCTGGGCAGGGGTGGTGAGGGGTCCTCAAAATGGTTGCTGGAAGGCAGAGCATGGTGGCTCACACCTGTAATCCTAGCACTTTGGGAGGCCAAGGTAGATAGATCATTTGAGGTCAGGAGTTCGTGACCAGCTTGGCCAACATGGTGAGACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCATGGTGGTATGCTCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGAGAGGTGAAGGTTGCAGTGAGCCGAGATCGTACCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCTGTCTCAATTTAAAAAAAAGAAAGAAAGAAAGAAAGAAAAACACAGGCCAGGCACAGTGGCTCACACCTGTAATCTCAACACTTTGGGAGGCTGAGGCAAGTGGAACACTGGAGGTCAGGAGTTCGAGATCAGCCTGGCCAACGTGGTGAAACCCCATCTCTACTAAAAGTACAAAAATTAGCTGGGCGTGGTGGCAGGTGCCTATAATCCCAGCTGCTTGGGAGGCTTAGGCGGGAGAATTGCTTGAACCCAGAAGGCGGAGGTTGCAGTGAGCCGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAAAGAGCAAAATTCTGTCTCAAAAAAAAAAAAAATGTTGCTGGAATTTGGGGTCTGAAAAACATCTTAAGTGATCCTTAAGCAAAAAGCCTTATGATTCTAATGTCGGAGAGCCTGTCTATAGGAACAACAGAGATGCAAATCAATTCTTAAGCAGTCTCATGTCCCTAATGTCAGGGATCCTATCTGCAGGAACAATGGGAATGCAAATGGTCAATATCTACTGCTATGTGACTTTCAGCCACACGAAAGTGGGCCAAAGTGCAGCCTGATTAATGCTTAATTACAACTACATTTCTGTCCCCAACCTGGCATGCCATTCTTGTCAACCTAGGTTTCACCACCCCCAACCACCAAAATCTTGCTGGCCTTGTGACTTGCTTTAGCCCATAGAATGTGGTGGAAATGACCTTGTGTCAGTTCTGTGACTAGGTCTCGAAAGGTCTTATACACCCTGCTATCTCCATGAGAACAGGCCCAGGCTAACCTGCAGATAATGAGCAATCTCAAAAGGCAGAGACAGGGCATCTAAGCTGAGGCTATCTTAGAGTGACCAGTCCTCAGCTGACTTGCTAGTGAACTGGTGATGAATGAATGAGCCCAGCCACTCAATCATCCCTGTACCTCTGGTACATAACCCACTTGATCATGGTGGATTATCTTTTTGATATGTTATAGGATTCACTTAGCTAGTATTTTGTTGAGGTTTTTTGCATCTATGCTCATCAGGAATATCGGTTTGTAGTTTTCTTTTTTTGTTATGTCCTTTCTTGGTTTTGGTATTAGTGTTTGTAGAATGATTTAGGGAAGTTTCCCTCTTCTGCTATTTTGTGGAATAGTGTCAATCGGACTGGTACAAATTCTTTGAATGTCTGATAGAATTCAGCTGTGAATCCATCTGGTCCTGGATTTTTTTTTTCTTTTTTTTTTTGGCCTTGTTTTTATTACCATTTCAATCTTGCTGCTTGTTATTGGTCTGTTCAGTTTCTGTTTCTTCCTGGTTTAATCTAGGAGGGTTTTATGTTTCCAGGAATTTATCCATCTCCTCTAGGTTTTCTAGTTTGTGTGTGTAAAGGTGTTCAAAGTAGCCTTGAATGATCTTTTGTATTTCCGTGGTGTCAGTTGTAATATCTCCGATTTCATTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTGTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAATGCAGTGGCATGATCTCAGCTCACTGCAAACTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCTGCCACCACACTCGGCTAATTTTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATATTAGCCAGGATGGTCTCCATCTCCTGACCTCATGATCCGCCCACCTCGGCCTCCCAAAATGCTGGGATTATGGGGTGTAAGCCAACTTGCCCAGCCCGTTTCATTTCTAATTGAGCTTATTTGGATCTTCTCTCTTCATTTCTTGGTTAATCTCACTAGCAGTCTTTCAATTTTATTTATCTTTTCAAAGAACCAACTTTGCATTTCATTTATCTTTTGTATTTTTTGTTTGTTTCAATTTTATTTATTTCTTATTTCTTTTCTTCTGCTGGGTTTGGGCTTGGTTTGTTCTTGTTTCTCTAGTTCCTGAGATGTGACCATAGATTGTCTATTTATGCTCTTTCAGACTTTTTGATGTAGGCATTTAAGGCTATGAGCTTTCCTCTTACCACTGCTTTTGCTGTATCCCAGAGATTTGATAGGTTGTGTCACCATTATCGTTCAGTTTGAAGAATTTTTAAATTTCCATCTTGATTTCATTGTTGGCCCCAGAATCATTCAGGAGCAGGTTATTTAATTTCTATATATTTGCATGGTTTTGAGGGTTCCTTTTGGAGTTGATTTCCAGTTTTACTCCCCTGTGCTCTGACAGAGTACTCGTGTGATCTTGGCTTACTGCAGCCTTTGCCTTGAGGGTTCCAGAGATTCTCCTACCTCAGCCTCACGAGTAGCTGGGATCACAGGCGTGTACCATCACGCCTGGCTAATTTTTATATTGTTAGTAGAGACGGGGTTTCACTTTGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCTTTTCTTTTTTTTTTCTTTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTGAGACGAAGTCTCACTCCCTCACCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAGCCTCTGCCTCCCAGGTTCAAGTGATGCTCCTGCCTCAGTCCCTGAGTAGCTGGGGTTACAGGCATGTGTCAGCATGCCTGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTTGGCCAGGCTGGTCTCAAACCCCTGACCTCAGGCGACTCTCCCACCTCGGGCTCCCAAAGTACTGGGATTATGTGAGCCACCGTGCCCAGCCTTAAATTTGTTGAGACTTGTTTTGTGGCCTATTATGTGATCTATTTTGGAGAATGTTTCATGTGCTGATGAATAGAATGTATATTCTGCAGTTGTTGGGTAAAATGCTCTGTAAATGTCTGTTAAGTTCCATTTGTTCTAAGGTATATTTAAGTCCATTGTTTCTTTGTTGACTTTCTGTCTTGATGACCTGTCTAGCGCTGTCATTAGAGTATTGAAGTCTCCCACTATTATTGTGTTGTTGTCTATCTCATTTCTTAGGTCTAGTAGTAATTGTTTTATAAATTTGGGACCTCCAGTGTTAGGTGCATATATATTTATGATTGTGGTGTTTTCCTTTTGACTAGTCCTTTTATCATTATATAATATACCTCTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4151:HG2_PB_HySA_29051:HG2_PB_PB10Xdip_11292:HG3_PB_pbsv_15624:HG4_PB_SVrefine2Falcon1Dovetail_9692:HG2_PB_SVrefine2PBcRplusDovetail_3898:HG2_PB_SVrefine2PB10Xhap12_11541:HG2_Ill_SVrefine2DISCOVARplusDovetail_4590:HG3_PB_SVrefine2PBcRDovetail_7530:HG4_PB_SVrefine2PBcRDovetail_7903:HG2_PB_SVrefine2Falcon2Bionano_7863:HG3_Ill_SVrefine2DISCOVARDovetail_11403:HG2_10X_SVrefine210Xhap12_11027:HG4_Ill_SVrefine2DISCOVARDovetail_11220:HG3_PB_SVrefine2Falcon1Dovetail_9689;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11027:HG3_Ill_SVrefine2DISCOVARDovetail_11403;NumExactMatchSVs=2;ClusterMaxShiftDist=0.064342;ClusterMaxSizeDiff=0.064342;ClusterMaxEditDist=0.115084;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=4312;DistBack=20852;DistForward=284;DistMin=284;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=286;REFWIDENED=16:21231493-21231778;PctSeqSimilarity=0.9958;PctSizeSimilarity=0.9977;PctRecOverlap=0.9652;SizeDiff=10;StartDistance=-145;EndDistance=-145;GTMatch=0;TruScore=98;MatchId=2010.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:98:1/1:0:31:0:24:./.:0:1:0:5:1/1:0:25:1/1:1:667:.:4345:.
chr16	21239053	HG3_PB_SVrefine2Falcon1Dovetail_9690	T	TCCTGCAAGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	20	PASS	ClusterIDs=HG4_PB_pbsv_15877:HG2_PB_PB10Xdip_11293:HG3_PB_pbsv_15625:HG2_PB_pbsv_15969:HG3_PB_SVrefine2PBcRDovetail_7531:HG4_PB_SVrefine2PBcRDovetail_7904:HG2_PB_SVrefine2PBcRplusDovetail_3899:HG2_PB_SVrefine2PB10Xhap12_11542:HG4_PB_SVrefine2Falcon1Dovetail_9693:HG3_PB_SVrefine2Falcon1Dovetail_9690:HG2_PB_SVrefine2Falcon2Bionano_7864:HG2_PB_SVrefine2Falcon1plusDovetail_4152:HG2_10X_SVrefine210Xhap12_11028:HG2_Ill_breakscan11_4670;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7864:HG3_PB_SVrefine2Falcon1Dovetail_9690:HG4_PB_SVrefine2Falcon1Dovetail_9693;NumExactMatchSVs=3;ClusterMaxShiftDist=0.176136;ClusterMaxSizeDiff=0.176136;ClusterMaxEditDist=0.264828;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=323;DistBack=6620;DistForward=27163;DistMin=6620;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=16:21239054-21239067;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2011.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:26:0:14:./.:0:6:0:4:1/1:0:28:1/1:2:48:.:.:.
chr16	22791560	HG4_PB_pbsv_15880	A	AAAGGAAGGAAGGCGAGGAGAGAAGGAAGGAGAAAAAGAAAAAAAGATCAAAGAAGGAAGGAAAGTAAG	10	PASS	ClusterIDs=HG4_PB_pbsv_15880:HG4_PB_HySA_23201:HG2_PB_pbsv_15972:HG2_PB_HySA_29066;NumClusterSVs=4;ExactMatchIDs=HG4_PB_pbsv_15880;NumExactMatchSVs=1;ClusterMaxShiftDist=0.169231;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.261538;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=68;DistBack=5;DistForward=12;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=12;REFWIDENED=16:22791559-22791573;PctSeqSimilarity=0.9506;PctSizeSimilarity=0.9706;PctRecOverlap=0.7971;SizeDiff=2;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=90;MatchId=2012.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:27:0|1:21:5:1:21:./.:17:3:14:2:0/1:20:7:./.:.:.:.:.:.
chr16	22845998	HG2_Ill_GATKHCSBGrefine_10527	T	TAAAAAGTATCCATTTTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGTGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4671:HG4_PB_pbsv_15883:HG3_Ill_manta_3555:HG3_PB_pbsv_15631:HG2_Ill_manta_4361:HG4_PB_assemblyticsfalcon_9430:HG2_PB_SVrefine2Falcon1plusDovetail_4157:HG2_PB_HySA_29067:HG4_PB_SVrefine2Falcon1Dovetail_9698:HG4_Ill_MetaSV_1826:HG4_Ill_GATKHCSBGrefine_10886:HG3_Ill_MetaSV_1880:HG3_Ill_GATKHCSBGrefine_10452:HG2_Ill_SVrefine2DISCOVARplusDovetail_4596:HG2_Ill_MetaSV_1773:HG2_Ill_GATKHCSBGrefine_10527:HG4_PB_HySA_23202;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10527:HG2_Ill_MetaSV_1773:HG2_Ill_SVrefine2DISCOVARplusDovetail_4596:HG3_Ill_GATKHCSBGrefine_10452:HG3_Ill_MetaSV_1880:HG4_Ill_GATKHCSBGrefine_10886:HG4_Ill_MetaSV_1826;NumExactMatchSVs=7;ClusterMaxShiftDist=0.172249;ClusterMaxSizeDiff=0.172249;ClusterMaxEditDist=0.244767;PBcalls=7;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=15542;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=16:22845999-22846017;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2013.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:45:0|1:47:0:0:32:1|0:0:9:12:0:0/1:35:13:0/1:7:19:.:.:.
chr16	23388808	HG2_10X_SVrefine210Xhap12_11036	T	TTCCCTCCCTCCTTCCTTCCTTCTCTGTTTCCCTCCTTCCTTCCTTCTTTCTCTGCTTTATTCCTTCCTTCCTTCCTCCTCTCTTTTCCCTTCCTCCCTCCCTTCTCCCTTCCTTCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11036:HG4_Ill_250bpfermikitraw_20797:HG4_PB_pbsv_15887:HG2_PB_pbsv_15977:HG4_Ill_150bpfermikitraw_20031:HG4_PB_HySA_23206:HG4_PB_SVrefine2Falcon1Dovetail_9701;NumClusterSVs=7;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11036:HG4_PB_SVrefine2Falcon1Dovetail_9701;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0436681;ClusterMaxSizeDiff=0.0436681;ClusterMaxEditDist=0.217391;PBcalls=4;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=116;DistBack=11866;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=321;REFWIDENED=16:23388809-23389129;PctSeqSimilarity=0.9553;PctSizeSimilarity=0.9569;PctRecOverlap=0.2308;SizeDiff=5;StartDistance=-87;EndDistance=-87;GTMatch=0;TruScore=71;MatchId=2014.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:31:./.:21:11:17:14:./.:2:9:2:1:0/1:4:9:./.:.:.:.:.:.
chr16	23787297	HG2_Ill_SVrefine2DISCOVARplusDovetail_4603	T	TTTTTTTGTTTTTTTGAGACGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTTCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCAGCCCTGGTTCAAGTGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGCGCGCGCCTCCACACTTGGCTAATTTTTGTATTTTTAGTAGAGACGAGATTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCCGCCTTGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCACTGTGCTGGCTGCAACCCCTATAAATTCTTTTAGCCATTTCTTCTCTAATTCACCTCCATATTTACAAACATACATCTATCTTTCCCCTTATAGACGTTATTTGCTGACTTCCTACTGTGGAGGGTGAGAATTTGACTCTTTCACACTCTCCTCCAATTTCCTTTCTCATCTTTGACCTAACCACATTACAAGGTTAGGTCAAAACATATTCAGTGTTTGCATTATTGTGACTTTGTAAATGCTATGTAAGCTGAGCCAGGTTGTGTACCATGATTACCTTTCCTTCTTGCATAAGCTTTTGTTTTCTCCAGAGTGAATAATTCCTTTATTTTACTTTATTAGTTTTCCACATATTTGTCTTAGTCTGTTTGGGCAGCAAAACCAAGATATGATAGACCGGGTAGCTGATAAACAACAGAAATGCATTTCTTGGCTGGGCGCGGTGACTCACACCTCTATTCCCAGCACTTTGGGAGGCCGAGGCGGATGGATCACTTGAAGTCAGGAGTTTTGAGACCAGACTGGACAGCATGGTAAACCATGCCTTGACTAAAAATACAAAAACTAGCTGGGCATGGTGGTGCACACCTGTAAGCCTCAGCTAGTTGGGATGCTGAGGCACAAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAATGAGCTGAGATCGTGCCACAATATTCCAGCCTGGGCTACAGAGTGAGACTCTGTCTTAAAAGAAAAAATAAAATAAAATAAAATAAAAAGACAAAGACAGAAACTATTCTTCTTCCCTTGAACCTGAGTGGAATTTTGTGATGCTTCAACAAATAGGCTGGTGGAAATGACACTGTGATTTTTGAGGCCAGGATATAAAAGATAGCATGTCATCTACTTGACTGTCCCTCTCTCAGGGCTCCTAACCTTAGAACCCAGTCACTGCTGTGAGAAAGCCCAAACTAGCCCACATGGACAGAGTGCACAGTGAGGAACTGAGGCCCCCAACTGACAGCCAGCATCAACCACCAGACCTGTGGGTAAACAACCCTTCAGATGATTCCAGCCCCCAGCCTTTGAGCCTTCTAGTTGAGGTCCCAGACACTGGGTAGCAGATACAAGTCATCCCTTCTGTGCTCTGTCTAAATTCCAGACCCACAAAACCCATGAACATAATAAGTGATAGTTTTTCACCACCAGGGTTTTGTTTGTTTGTTTGTTTGTTTGTTTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9697:HG3_PB_pbsv_15637:HG2_PB_pbsv_15980:HG4_PB_SVrefine2Falcon1Dovetail_9703:HG2_PB_HySA_29086:HG2_PB_PB10Xdip_11302:HG3_PB_HySA_24099:HG2_Ill_breakscan11_4672:HG3_PB_SVrefine2PBcRDovetail_7540:HG2_PB_SVrefine2Falcon2Bionano_7867:HG2_Ill_SVrefine2DISCOVARplusDovetail_4603:HG2_PB_SVrefine2Falcon1plusDovetail_4164:HG2_10X_SVrefine210Xhap12_11043:HG2_PB_SVrefine2PBcRplusDovetail_3904:HG2_PB_SVrefine2PB10Xhap12_11548;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4603:HG2_PB_SVrefine2Falcon2Bionano_7867;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0730563;ClusterMaxSizeDiff=0.0723861;ClusterMaxEditDist=0.196985;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=1492;DistBack=3388;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=285;REFWIDENED=16:23787298-23787582;PctSeqSimilarity=0.9987;PctSizeSimilarity=0.9993;PctRecOverlap=0.9846;SizeDiff=1;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=99;MatchId=2015.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:89:1/1:0:23:0:28:1/1:0:10:0:7:1/1:0:35:./.:16:249:.:1406:.
chr16	23865299	HG4_PB_pbsv_15893	T	TTTTTTTTTTTATTTTTTTTTTTTTTGAGGACGGAGTCCGCTTCTGTCGGCCAGGCATTGGAGTGCAGTGGCGGTGATCTCGGCTCACTGCAAGCTCCGCTCCGGGTTCACGCATTTTCCTGCCTCAGCCTTCCCAAGTAAGCTGGGGACTACAGGCGCCCGCCACTAGCCGGCTAATTTTTTTTTTGTATTTTTAGTTAGAGGACGTGGGTTTCACCGTTTTAGCGGGTGTCTCGATCTCTTGACCTCTGATCCGCCCGCCCTCGGCCTCACCAAAGAAGTGCTGGGGATTACAGCGTGAGCACCCGCGCACCCGGCCCAAGGCCACTTC	20	PASS	ClusterIDs=HG2_PB_HySA_29090:HG3_PB_pbsv_15639:HG2_PB_pbsv_15982:HG3_PB_assemblyticsfalcon_9602:HG4_PB_pbsv_15893:HG4_PB_assemblyticsfalcon_9448:HG3_PB_HySA_24100:HG2_PB_SVrefine2Falcon2Bionano_7868:HG3_PB_SVrefine2PBcRDovetail_7541:HG2_PB_SVrefine2Falcon1plusDovetail_4165:HG3_PB_SVrefine2Falcon1Dovetail_9698:HG4_PB_SVrefine2Falcon1Dovetail_9704:HG2_PB_HySA_29091:HG4_PB_HySA_23217:HG2_Ill_breakscan11_4673;NumClusterSVs=15;ExactMatchIDs=HG4_PB_pbsv_15893;NumExactMatchSVs=1;ClusterMaxShiftDist=0.155963;ClusterMaxSizeDiff=0.155963;ClusterMaxEditDist=0.20944;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=330;DistBack=-1;DistForward=9192;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=16:23865300-23865300;PctSeqSimilarity=0.9272;PctSizeSimilarity=0.997;PctRecOverlap=0.9637;SizeDiff=-1;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=96;MatchId=2017.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:32:0|1:26:3:0:25:./.:7:2:25:0:0/1:22:6:0/1:8:4:.:.:.
chr16	24347964	HG3_PB_SVrefine2Falcon1Dovetail_9703	TAGGTATGATCCTGGGA	CTTTGGGATGCCAAGGTGCAGGACGGCGTAAGGCCAGGAATTCGAGACCAGCCTGGGCAATATAGCAAGACCCCATCTCTACCTTGAAAAAATAAAATTAAAATTAAAAAAAGAAAAACTAAAATGAAGAGATCAAGGCCGAGGGGAAGAAGGTGTCTTGGTCCATTTGGCTGCTATAACAAAGTACCGTAGGATGGGTGGCTTGCAAATAACAAATTTGTTTCTCATGGTTCTGGAGGCTGGAAGTCTGAGATCAGGGTGCCTGCCTGGTGAGGTGCTGGTGAGGGCCCTCTTCCGGGTTGGTGGGTGCTGGTGAGGGCCCTCTTCCAGGTTGCAGAGGCTGTCTTTTCACTGTATCGCCACATGGC	20	PASS	ClusterIDs=HG4_PB_pbsv_15903:HG2_PB_PB10Xdip_11311:HG2_PB_SVrefine2Falcon2Bionano_7873:HG2_PB_SVrefine2Falcon1plusDovetail_4170:HG2_10X_SVrefine210Xhap12_11046:HG4_PB_assemblyticsfalcon_9456:HG4_PB_SVrefine2Falcon1Dovetail_9709:HG3_PB_assemblyticsfalcon_9610:HG3_PB_SVrefine2Falcon1Dovetail_9703:HG2_PB_SVrefine2PB10Xhap12_11555:HG2_PB_SVrefine2PBcRplusDovetail_3909:HG4_Ill_Spiral_1244:HG2_Ill_Spiral_1056:HG4_PB_HySA_23224:HG2_PB_HySA_29099:HG2_PB_pbsv_15987;NumClusterSVs=16;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9703:HG3_PB_assemblyticsfalcon_9610;NumExactMatchSVs=2;ClusterMaxShiftDist=0.202112;ClusterMaxSizeDiff=0.202112;ClusterMaxEditDist=0.27451;PBcalls=13;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=351;DistBack=0;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=16:24347981-24347963;PctSeqSimilarity=0.9838;PctSizeSimilarity=0.986;PctRecOverlap=0.9728;SizeDiff=-5;StartDistance=-11;EndDistance=5;GTMatch=0;TruScore=98;MatchId=2018.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:43:./.:7:20:13:17:1|0:0:29:20:0:0/1:26:9:0/1:7:43:.:.:.
chr16	24884188	HG2_10X_SVrefine210Xhap12_11050	A	ATAGCTTATGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGCAGGCAGGTCACTTGAGCCTAGGAGTTCGAGACCAGGCTGGGCAACATGGTGAAAACCTGTCTCTACTAAAAAAATACAAAAATTAGCCAGGCATGGTGGTAAGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGAGCCATAAGAATTGCTTGAGCCCGGGAGGCAGAGGATGCAGTGAGCTGAGATCACACCACTGCACTCCAGCCTGTATGACAGAGCGAGACCCTGTCTCAATCATATATATATATATATATATATATATATATATATATTTTAAACCATATATATATTTTAAAATCACGTATATGATTCAGTGATTTTTTTTCTTCCTTTGCACACAAAACTATAATAATTGAGCTATTTCTGACTGGTACAAAATGTCAACGTTTTAGTTACAAAATAATGCTACTTTTGACTCTTTGAAAAGCATTTTTTTGTGGGTTTTTTTTTTTTTTTTGACAGAGTTTTGCTCTTGCCCAGGCTGGAGTGCAATGGTGTGATCTCGGCTCACTGCAAACCTCTGCCTCCCGGTTTCAAGCAATTCTCCTGCCTCAGTCTCCCAAGTAGCTGGGATTACAGGCGCCCACCACCCCCCCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTGGAACCCCTGACCTCGTGATCCACCCACCTCGTAATCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCATCATGCCTGGCCTGAAAAGCAGTTTTTAAAAAATCATCTATGATCTCACTGGCAGCATTGTATCATTCATACTTTCTAACCTTTATTCTGTTCTAGATGTTCTATTGCACATGGCAAGATCACACAATATCACAGTGTTGTTCATAAAGCAATAACTGATTTTAGCTTTTTATTATGGAAATGTTAAAAAATACGCAAAGTAGGCTGGGCATGGTGGCTCATGTATGTAATCCCAGCACTTTGGGAGGCCGAGTTGGGTGGATTGCTTCAGGCCAGGAGTTCGAGACCAGCCTGGGCAACATGGCAAAATCCCATCTCTACCAAAAATACAAAAATCAGCTGGGTGTGGTGATGCACACCTACAGTCTCAGATACTCAGGAGGCTGAGGCAGGAGGATTAGGATAACTTGAGACCGGTAGGTTGAGGCTACAGTGAGCCATAATTGTGCCACAGCACTCCAGTCTGGGGGACAGAATGAGACCCTGTCTCAAAAACACACACACACACACACACACACACACACACACACACACACACACGTAGAAAAAGCTTAGGAGTCAGAAATCATGTTAAAAATCCTTCTGGCTGGATGCAGTGGCTCATGCCTGTAATCCCTGCACTTTGGGAGGCCATGCGGGGAGAATCACTTGAGTCCAGGATTTCAAGACCAGCCTGGGCAACAGAGCAAGACCTCATCTCTACTAAAGATTTTTTTTAAATTAGCCGGGCCTGGTGGCGAGTGCCTGTGGTCCCAGCTACTCCAGAGGATGAAGTGGGAGGAACACTTGAGCCCAGGAGTTGGAAGCTGCAGTGAGCTATGATCACGCCACTGCAGTCTAGCCTGAGTGACAGAGAATAGTTCAATTCTGTATTAAGGGCAGGGATATATGGGTAAGTAACCTCCCTTGGAGGTAATCCCAAAAGTCTGAAAGCAAGACCTTTGGTGAGCAGGGGGCCTGGGTCTGCTCCTGACCCCTGTGGCTAGCTCCCATGTAGACACAGCATCTGAGGTATAACAACACTGGACTGGAAATGAAGCTCTCCGAGTCAAGGCATCAAGAAAGTTATTGAGCACCTACTACAGGAAGGCATATATGATGGTAGAGATGCAGGTGAGTAAATATTTAGGGTTGCCAGACATTCTCACCCGATGGCTTCCATGTTCTCTGGCAAACAGAAGATGATGTCATCAGCTGAGAGTGAGAAAGGAACTTGCTTTAGGTTGAGAAGATGCAAAGTTTGTTTTTGTTTTGTTTTGTTTTGTTTGTTTTGAGATGGAGTCTCACTCTGTCACCCAGGCTGCAGTGCAGTGGCACAATCTTGGCTCACTGCAGTCTCCACCTCCCAGGTTCAAGCAATTCTCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAAGCGCCCACCACCACGCCCAGCTAATTTTTGTATCTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTACCAGCCAGATAGCCAGATGCAAAGAACTGAAATGGCTGCAGTAGTTGTTTGTAATAGAAAAACCTGGGAACAACCACCATGTCCATTAATAAGGAACTGGACAGCCGGGGTATACCATTTCATGCTGTGACAAGGGATGAAGTCCACAGAGGTATGCTGATCTCCAAGCTATTGTTAAATAAGAAAATAAAATCTCCTAGATCTAGACATCCTTTGGGCAATATCTTACACTTATACAAAGGAGAGGTTAACCCCATCCTAGATAATAAATGCCAAAGTGTTGAGAAAAGTTCAAAAGCTACCCAATTTGTTTTTATTAGGACATGAAATAGACATTCAGAAAAGCAATAAGACACACACACACACACACAAAACAAACACAAAAGTGCAGCTTGACAAATTATTGTAAAAGGAACACCCACATCAAGACAGAAAACATAATGTCAGCCAGGTGCGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4172:HG2_PB_pbsv_15990:HG2_PB_HySA_29115:HG2_PB_PB10Xdip_11313:HG4_PB_HySA_23232:HG2_PB_SVrefine2PBcRplusDovetail_3912:HG2_PB_SVrefine2PB10Xhap12_11557:HG2_PB_HySA_29114:HG3_PB_HySA_24109:HG4_PB_SVrefine2Falcon1Dovetail_9711:HG4_PB_assemblyticsfalcon_9461:HG3_PB_assemblyticsfalcon_9615:HG3_PB_SVrefine2PBcRDovetail_7546:HG2_PB_SVrefine2PBcRplusDovetail_3911:HG2_PB_SVrefine2Falcon2Bionano_7875:HG3_PB_SVrefine2Falcon1Dovetail_9705:HG2_Ill_SVrefine2DISCOVARplusDovetail_4613:HG2_10X_SVrefine210Xhap12_11050;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11050:HG2_Ill_SVrefine2DISCOVARplusDovetail_4613;NumExactMatchSVs=2;ClusterMaxShiftDist=0.243939;ClusterMaxSizeDiff=0.243939;ClusterMaxEditDist=0.283916;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=2763;DistBack=19763;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=16:24893984-24884444;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9935;PctRecOverlap=0.9572;SizeDiff=-18;StartDistance=-110;EndDistance=-110;GTMatch=0;TruScore=98;MatchId=2019.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:./.:0:2:0:2:./.:0:2:0:0:./.:0:4:1/1:8:353:.:2886:.
chr16	26164404	HG2_Ill_Krunchall_21522	A	ATATACACAATATATTGTGTATGTATACACAATATATTGTGTATGTATACACAATATATTGTGTATGTATACACAATATATTGTGTATG	20	PASS	ClusterIDs=HG2_PB_HySA_29128:HG4_PB_pbsv_15912:HG2_PB_pbsv_15995:HG4_Ill_Krunchall_21852:HG2_Ill_Krunchall_21522:HG2_Ill_250bpfermikitraw_21154;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21154:HG2_Ill_Krunchall_21522:HG4_Ill_Krunchall_21852;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0441989;ClusterMaxSizeDiff=0.0331492;ClusterMaxEditDist=0.10929;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=2;DistForward=59;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=198;REFWIDENED=16:26164358-26164555;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2020.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:23:0|1:45:1:2:21:./.:0:24:14:1:0/1:29:19:./.:.:.:.:.:.
chr16	26183389	HG2_PB_SVrefine2PB10Xhap12_11561	C	CCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGAAATAATGAGATCCTGAACTAAGGCAACAGAACTGGAGAAAAATGGGTGAATTGGCGAGAGATTTATGAGAAAGAACCCATAATTGAGAGCTTGTACATATATGTAGAGGGAGGCAGAGGAAGGGGAAGTAGGGCATGGGAGAAGTCTAGAATGATTTGGACACCTGGTAATGGTGCCCTCCCCACTGCCTGCTTAAATAGACAAGCAAGCTTGATTTGACATCTGTATAGAGCTTGCCAAATATACCAAAGATCCTTCAGTTTAAAAAGCACAGCAGAAACTTCTGATTATTCCCTTTCAATATCCTTGTGATCCAAAGGCAAATTTCATCAGCCAGGAGTCCTCAGCAGGGGATTGAAAGCATGGCCCGGCCATTGTGCTTCTTTGATTCACCAGCTTAGAGCCCTAGACCCAAGTGGCTGAACCATCCCTCCTCCTTTCTATCCCCAAGACTGTCTGCCTTTCAGGGAACTTGTGTCCTGCTGATCCCAGAATTTTAGGATATTCAGGATGAGGGTAGAGTTGGCGACGGCACTACAGCCCTTTCCCTGTGATCCTGATGAGATACTCCCACAACCATTGGTAGTTCCTCCATTTATTCCACAAATGCTTATTGAGCAATAATATGTTCCAAGCTCTGCATAATGTGCTGGGGATACATCAGTGAGCAAAGTAGGAATGTCCCATTCCTAACCTTATAAATCTAATCTTCTAACGGGGATTGGTAGAAGAAATGTCGCTCTTACCAATACGCGGTGAAAACTGCAAGTGCGAGAAAGGAGTGAACTACAGAGCTATGAGACGCCACACTAGTGCAGGGATTTCTCGTACTTAGTGAGGTTAAGTGAGGTCTTCCTGAGAAAACGACAGTTACACTGAAATCTGGTAGATGAAATAGTGTATTTAAGTAAAGGTGAAAAGAGGAAGGAAATTTCCCCAATCTAAGCTCACCCTTCTCAGCAATCTAAGAAATCGTAAAATATTGCTTTTATAAGATCAAACTCTCACTCAAGGATCTAAAGTAGCTCTTTGCTGCTCGCAGTTCAGGTTGATACTTTTTTAATACAGCATGGTAGAGACTCTCTGATGCACTGGAACCTAACTAAGGGATGGTAGTTAGGAGCCCTGGATTTGGTGCAGGCAGATCCAAGCTAAATCCAGGCTTCATCCCTTGCTAGCTGTATGACCTTGGCTGAGGTATATGCCCTGCCTGGGCTTCAGTTTCTTCGGCTGGTAGAGTGAGGCTAACACCACCCCACTTCCTAGTGATCCGTGAGAAGATAATGGGATAAAGAAGACAGAGTGTACAGCAAGGCTTCTGATGTGTAGTCAGTACTCAATGGTTGATAGCTCTTATTGACATGGACTTCTGAATTTGGCTCCAGGTCAATTCACTGAAAATCAGTTCCAAAAAGCCAATTCACTGAAAAACAAACTGGGAAAAAAGATCAATTCACCAAATGACTGATTTGCCGCAGTTACTTGATGCAGAAAGCATGGTAACTGGTACAAAATAGAAACATAAAACAAAAAGTGCCCTGAGTCTCACATTCCCCTCCTCTTCACACCCACATGACTCAGAAGAACAGTCTGAGTAAGTTCCTTAGCTCCATTTTTTCACTTCCATTCACAATGCATGCCTTCAATCTGGCTCCTGCCTTCAACAGTCCACCAGCCAGTTTCTTTCTGAGGTCAGTAATTACTCCACCTGGCTAGGCCCAAGGAGCTCTCTTCATTCCTGTCTTGACCACTTACTGCTTAACCTATTTGGAGTAATCCATCACTTTCTTTGGAAAGTGGAAACATTGTCTTTCCTTGGCTTATTTATTATTATTATTATTATTTTAACCACACTCCTTTCCATGTTTCTCTCCTACTTCTCTGACTTTCCTCCTCAGGTTCTTTTTATTTTTTCTAGAAATGGGGTCTTACTATGTTGCCCAGGCTGGCCTTGAACTCTTGGCCTCAAGCGACCCTCTTGCCTCAGCTTCCCAAAGTGCTGGGGTTAGAGGTGTGAGCCACTGCACCAGCACCCTCAGGCTCTTTAATTGTAATTACTTAAGGAATGATCCCAGACCCCTGTTCTCCTTATTGCCGTCCTTTCCCGGTCCCCGTGTGGCAGGTGATAACATCCACATCCATGTGTTTCATTGTCACCCATTTGCTGACAACTCCAAAGTCTATACTTCTTGCCCAGATCTTTCTTCCGACATCCATTCTCACATGTCTAACTGACTACCCTTGAGATCACCACTTAGAGACCTCACAGTTCCCCAGTACAGCCAAGAGAAAACCCATGACTCCAGTTCCCCCACACCTTCACTTCCCAAGCTGATCTTCCCCCAGTGTTCTGAGTCTTGGTATATAGTGTCCCACACAACCAGATATTGATGTCTAAAACCTAAGATTAATCTTTGACCTCACCCTCTCTCTCACCATCTACATCCAAAGAATTAACCAATCTTGCAGATTCTCTTTCTAAATTTTGCCTCAGACATTTCCCTTATTTACAAAGAGCTTTACAAAATGCACATCTGATCATGTCACTCCCTTGCTTTGAATCCTTAATTCTATGAGGATAAAGACCGAAATCCTTAACATGGCTCAGAAGGCCCTGTGTAATCATACCACAGCTTTTCTCTCCATCCGTATGTCACATCATTTCCATTCTGTTTCCTGATCTCTAGCCACACGGCCCTTACTTTAGTTCATTTACTTCACTACCTTGCTATAAAGTTCTAAGTGTGTGCTCCCCTTCCCTGTCTCCCACTCAACACCACTGACTAATTCTTCTTTATTTTATAGTTATCAGGGTAAATGTCACTTTCTCAGACTACATGAGTTTCCTAATTATGAGCTCACATTCTACTTTGCCAATAGTAATTAAACAAGGAAATGAATGAATGGTTAAAAAAAAACCCTATACATTCTATGAGTACAAGAACAATATCTGCTTTGTTCACTACTGCATCTTCAGTGCATTAGATAGTGCCTGATATACCAATGATACTCATTGAATACTTTTTGAATAAATAAATCAGTGAATAAGTAAACCTATATGTCTTATAATATTGTTTGTGACAATGAGATAAGACAGTGGAAATGTTAGGTAACCTGTAAAGTGTTGTATATATCCCACTCATTTTTGTTACTGAAGTCTTGAGCGGACAGCTGTAATGCCAGAGCAACCAGCTATGAAGTCTGAGCTGACAGGAACAGGGCTCTCGATGGGATCAAAGATGACAAACTGAATCTGACACATGTTTAACAATGTGCAGAACCTGGACTGTGTTGTGTGGGAATCAAGTCCCACTGACTAATTTCATAAGGTTGCTGGATGATAGTGCAAGCTCTGATCTGTCCCTTACAGCTTTCCCTCTACCTACACCCTGCTGTAGGGGAAAGGGAAATTCCCGATTGTCCTCCTTCAGTCTGAAAGTCGGGGGTTTTCCTTGTGCATCCTGCCATCCCTCTATCAGGATATATACCAAACTGTGTCTCCATTGTGTGTTTACATTCAGCTTGTTCCCACTAAAAATAAAAAATAGTTTTGTTAGGGGGACATAAATATGTGCCATGCACTGTGCTAAATATTCTACCTCATTATCAGTTAATCTTGACAACAATCTTGTTGGAGGAGGTATGCCTGTTTTCAGATGGGGAAACTGAGGCTTAGTGCTGTGACATGCCTTGCTCAAGGATTTACCTATTAATGAATACAGAAAACTAGAATTTGAACACAGATAGGTGTGCCCAATTCAGTAGCATATTGGTACATGTCAATGACAGGTTCTTTAGGAAGCAGAAACAGGCCTTTTGGTGAGTTTGCTAATTTCTCTGGTATATATATTTCCATTATAGCTGAATTCAAGCAACACAGCCTTAAGCTGACAAGAAATCATGTGCTCGGCTGGGCATGGTGGCTCACACTGTAACCTCAGCACTTTGGGAGGCCGAGGTGGGAAGATAGCTTGAGCCTAAGAGTTTGAGAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9710:HG2_PB_PB10Xdip_11694:HG2_PB_HySA_29129:HG2_PB_assemblyticsfalcon_9647:HG3_PB_assemblyticsfalcon_9623:HG2_PB_SVrefine2Falcon1plusDovetail_4176:HG2_PB_SVrefine2PBcRplusDovetail_3915:HG2_PB_SVrefine2PB10Xhap12_11561;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11561:HG2_PB_SVrefine2PBcRplusDovetail_3915;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0191091;ClusterMaxSizeDiff=0.0191091;ClusterMaxEditDist=0.0235761;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=4041;DistBack=2753;DistForward=24;DistMin=24;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=31;REFWIDENED=16:26183390-26183420;PctSeqSimilarity=0.9991;PctSizeSimilarity=1;PctRecOverlap=0.9938;SizeDiff=0;StartDistance=-25;EndDistance=-25;GTMatch=0;TruScore=99;MatchId=2021.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:45:0|1:33:0:0:27:./.:0:1:10:0:0/1:22:10:0/1:160:219:.:4107:.
chr16	28926421	HG2_PB_SVrefine2PB10Xhap12_11576	A	ACCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCGCTGCTACCTCCGCCTCCTGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCCAGGAGCTGGGACTATAGGCACACACCAACATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGCCCAGGCTGGTCTCGAACTCCTGACCTCGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCACCACGCCCGGCTTTTTTTTTTTTTTTTTTAAGAGATGAGGTCGGCCGGGCGCGGTGACTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCGGATCACAAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTATTAAAAGTATAAAAATTAGCTGGGGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCCTTTGAACCCGGGAGGCGGGGGTTGCAGCGAGCCGAGATCACGCCATTGCACTCCAGCCTGGGCAACAGAGTGAGATGCTGTCTCAAAAAAAAAAAAAAAAAAAAAGAGATGAGGTCTCGTTCTGTTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9725:HG2_PB_pbsv_16014:HG2_PB_PB10Xdip_11737:HG2_PB_HySA_29161:HG4_PB_HySA_23272:HG4_Ill_GATKHCSBGrefine_10909:HG4_Ill_MetaSV_1837:HG4_PB_pbsv_15926:HG3_PB_pbsv_15672:HG2_PB_SVrefine2Falcon1plusDovetail_4190:HG2_PB_SVrefine2PBcRplusDovetail_3925:HG2_PB_SVrefine2PB10Xhap12_11576:HG4_PB_SVrefine2PBcRDovetail_7909:HG4_Ill_SVrefine2DISCOVARDovetail_11229:HG2_PB_SVrefine2Falcon2Bionano_7884:HG3_PB_SVrefine2Falcon1Dovetail_9721:HG2_10X_SVrefine210Xhap12_11071:HG3_PB_SVrefine2PBcRDovetail_7560:HG2_Ill_SVrefine2DISCOVARplusDovetail_4631;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11576:HG2_PB_SVrefine2PBcRplusDovetail_3925;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0666138;ClusterMaxSizeDiff=0.0650278;ClusterMaxEditDist=0.157321;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=610;DistBack=62105;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=235;REFWIDENED=16:28926422-28926656;PctSeqSimilarity=0.9853;PctSizeSimilarity=0.9951;PctRecOverlap=0.8891;SizeDiff=-3;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=95;MatchId=2024.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:0:16:1:19:./.:0:2:0:4:1/1:0:28:./.:5:63:.:.:.
chr16	29854821	HG4_PB_SVrefine2PBcRDovetail_7910	C	CGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGTGAAGGGAGTGAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGTGAAGGGAGTGAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGTGAAGGGAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAGGGAGGAAGGGAGGAAGGGAGGGAGGGAGGGGAGGGAGGGAGGGGAGTGAAGGGAGTGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGTGAAGGGAGTGAGGAAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGTGAAGGGAGGGAGGGAGGAAGGGAGGAAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7910:HG4_PB_pbsv_15933:HG3_PB_SVrefine2Falcon1Dovetail_9724:HG2_PB_pbsv_16016;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_7910;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0979021;ClusterMaxSizeDiff=0.0979021;ClusterMaxEditDist=0.207459;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=436;DistBack=56825;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=106;REFWIDENED=16:29854822-29854927;PctSeqSimilarity=0.9795;PctSizeSimilarity=0.9604;PctRecOverlap=0.8352;SizeDiff=-18;StartDistance=-66;EndDistance=-66;GTMatch=0;TruScore=92;MatchId=2025.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:17:0|1:25:1:1:13:./.:0:5:5:1:./.:4:3:0/1:3:7:1676096:.:.
chr16	30135247	HG2_PB_SVrefine2PBcRplusDovetail_3930	G	GGGCTGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGTTTGAGACCAGCCTGACCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGTGGGCGCCTGTAATCCCAGCTATTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAAGAGGTGGAGGTTGCAGTAAGCCAAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAAAAAAAAAAGAAAAAAGAAAATATAATTTTTTTTGGTAGATACTGGGTCTTGCTATGTTGCCTAGGCTGGTCTGAAACTACCGACTTCACAGGATCCTCCCACCTCGGCCTCCCAAAGCTCTGGGATCACACCTGTCCATCTCAGACTGTTACAACTGAAGAAAGGGCCCTCGGAGATCATCCAGCCCATCCCCCTCATTTCACAGCGAAGATGTGAGCTGGAAGCTTCACAAAAACACACAGCTCCCAGGCTTCAGTAAGTAATCATGTAGTGGGTTGTTTTTTTTTCTGTCCCTGAGAAGCTGGGAGTAGGTCCTTGGATGCATTACAGATCAAGAGACAAAATGGAACAGTAATTATGATTCTGAAATTGCTCATAATTAGATCCACAGCCAGGCAGTCTCACTCAGATTAATGAGACTGAGTTTCTGATTCCCAGTGGCCCATAGGTCAGTGAAGGTTCAAGAGGTGCTAATTAGATCAATGAGTTTTTTTAGTTATTCATTTGATAAAGCATTGCATGGCACTGTGTGCAAAGCTCTGAGCTAGGTACTGTGGCTGATAAAGGATTACTATATAGTATGAATCTGTGTTTAAGAGAAAGAACCCCCCAGAGCCTGATTGCCTGGGATAGAATCCGATCTTTGTTCAAGTTGAATGATGAAGAATAAGAAAAAGAAGAAAAAAAGAATCCCATCCTTGCCACTTATTTACCCTGTGTTACCCTGGGCACATTACCTACTGGCTTCTTGGTGGAGGCCTCCGATCTACTGAAGAGATAAAATACACACTCCAAGCTATTGAAGAGATAAAATATATAAATCAATTTAGGCCCCAGTGCAGTGGCTCACTCCCAGTGCTTTGTTTGGGAGGCCGAGGCAGGAGGATCACTTGAGCCCAGGAATTTGAGGCTTCAGTGAGCTATGATTGCACCACTGCACTCCAGCCAGGGTGACAGAGTGAGACCCTGTCTGTATTTCTTTTTCTTCCTCTTTCTCTTTTAATAATATTGATACCCTGTCTCTAAAATAATAAATAAACAGGCCAAGTGTGGGGGCTCACACTGGTAATCCTAGCACTTTGAGAGGTCAAGGCAGGAGGATCCCTTGAGACCAACAGTTTGAGACCACCCTGGGCAACATAGGAAAACTCCATCTCTACAAAAAGACAAAAATTAGCTGTGTGTGGTGGTGCATGCCTGTGGTCCTGGCTACTCCAGAGGTGGGGAAATCGCTTGAGCCCCAGGAGGTCAAGGCTGCTGTGAGCTATGATTGCAACATGGCACTCCAGCCTGGGCAACAGAGGGAGACACTGTCTCTACAATAATTTTTTTTTTTTTTAAAGGGAGTCTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCCGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAACTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCACTACCACGCCTGGCTACTTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGGCCAGGCTGGTCTCAAACTCCTGACCTCGTGATCTGCCCTCCTCGGCCTCCCAAAGTGTTGAGATTACAGGCGTGAGCCACCGCAATGGGCCAAAAAATTTTTTTAAAAAAGAAAAAGTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4194:HG3_PB_pbsv_15675:HG2_PB_pbsv_16017:HG3_PB_HySA_24177:HG2_PB_HySA_29188:HG4_PB_pbsv_15934:HG4_PB_HySA_23317:HG2_PB_PB10Xdip_11751:HG4_PB_HySA_23316:HG2_PB_HySA_29187:HG4_PB_SVrefine2Falcon1Dovetail_9728:HG4_PB_SVrefine2PBcRDovetail_7911:HG3_PB_SVrefine2PBcRDovetail_7565:HG3_Ill_SVrefine2DISCOVARDovetail_11410:HG2_PB_SVrefine2PBcRplusDovetail_3930:HG2_PB_SVrefine2PB10Xhap12_11580:HG2_Ill_SVrefine2DISCOVARplusDovetail_4636:HG2_10X_SVrefine210Xhap12_11076:HG3_PB_SVrefine2Falcon1Dovetail_9725;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4636:HG2_PB_SVrefine2PB10Xhap12_11580:HG2_PB_SVrefine2PBcRplusDovetail_3930:HG3_Ill_SVrefine2DISCOVARDovetail_11410;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0686869;ClusterMaxSizeDiff=0.0676768;ClusterMaxEditDist=0.184425;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1921;DistBack=61651;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=295;REFWIDENED=16:30135248-30135542;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.9964;PctRecOverlap=0.9596;SizeDiff=-7;StartDistance=-74;EndDistance=-74;GTMatch=0;TruScore=98;MatchId=2026.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:1:10:0:25:./.:0:5:0:3:1/1:0:46:1/1:13:340:1676096:1994:.
chr16	30462674	HG2_Ill_GATKHCSBGrefine_10558	C	CGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCAAAGAAAGTCTTAGAGAGTGTTTGTTGAATGAATAAATGCAAAGAATGTGAAGAAGCAAACAGTGCAACACTCTGACATTCAGAACTCATCAAAGCATTGCAAATCTTTTTTAAAAATTATAATTTTTTGGCCGGGCAAGGTGGATTATGCCTGTAATCCCAAAACTTTGGGAGGCTGAGGCAGGCAGATCACAAGGTCAGGAGTTTGAGACCAGCCTGACCAACAAGGTGAAACCCCGTCTTTACTGAAAATACAAAAATTAGCCAGGCATGGTGGCGCATGCCTATATTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTAAGATGAGATCATGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCATCTCAAAAAAAAAAATTATAATTTTTTTTGAGACAGGGTCTT	20	PASS	ClusterIDs=HG2_PB_HySA_29194:HG4_PB_pbsv_15939:HG2_PB_pbsv_16020:HG2_PB_PB10Xdip_11757:HG2_Ill_MetaSV_1784:HG3_Ill_MetaSV_1892:HG4_Ill_MetaSV_1840:HG4_Ill_GATKHCSBGrefine_10916:HG3_Ill_GATKHCSBGrefine_10485:HG2_Ill_GATKHCSBGrefine_10558:HG2_PB_HySA_29195:HG3_PB_pbsv_15678:HG4_PB_SVrefine2Falcon1Dovetail_9729:HG3_PB_SVrefine2PBcRDovetail_7567:HG2_PB_SVrefine2PBcRplusDovetail_3932:HG2_PB_SVrefine2PB10Xhap12_11587:HG4_Ill_SVrefine2DISCOVARDovetail_11233:HG3_PB_SVrefine2Falcon1Dovetail_9729:HG4_PB_SVrefine2PBcRDovetail_7913;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10558:HG3_Ill_GATKHCSBGrefine_10485:HG4_Ill_GATKHCSBGrefine_10916:HG4_Ill_MetaSV_1840;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0531697;ClusterMaxSizeDiff=0.0504431;ClusterMaxEditDist=0.221328;PBcalls=12;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=715;DistBack=-109;DistForward=-1;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=130;REFWIDENED=16:30462654-30462783;PctSeqSimilarity=0.9993;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2027.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:12:0:12:./.:1:1:0:1:1/1:0:18:1/1:5:107:1676096:.:.
chr16	30763449	HG3_PB_SVrefine2PBcRDovetail_7568	A	AGCTCATGCCTGTAATCCCAGCATTTTGGGAGGCTGAGGCAGGTGGATCACCTGAGGTTAGTAGTTTCAAGACCAGCCTGGACAACATGGCGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGTGCACGCCTGTAAGCCCATCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGAGAAGTGGAGGCTGCAGTGAGCCGAGATCATGCCATTGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGATGCCTGCCACCACACCTGGTTAATTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCCTGAACAGACTGCGGCCAGGTACAGTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4639:HG3_PB_pbsv_15679:HG2_PB_pbsv_16021:HG2_PB_PB10Xdip_11764:HG4_PB_HySA_23323:HG4_Ill_GATKHCSBGrefine_10917:HG3_Ill_manta_3566:HG3_Ill_MetaSV_1893:HG3_Ill_GATKHCSBGrefine_10486:HG2_Ill_manta_4374:HG2_Ill_GATKHCSBGrefine_10559:HG4_Ill_MetaSV_1841:HG2_PB_HySA_29201:HG2_Ill_MetaSV_1785:HG2_PB_SVrefine2Falcon1plusDovetail_4199:HG4_PB_SVrefine2PBcRDovetail_7914:HG4_PB_SVrefine2Falcon1Dovetail_9730:HG4_Ill_SVrefine2DISCOVARDovetail_11235:HG3_PB_SVrefine2PBcRDovetail_7568:HG3_PB_SVrefine2Falcon1Dovetail_9730:HG3_Ill_SVrefine2DISCOVARDovetail_11412:HG2_PB_SVrefine2PBcRplusDovetail_3933:HG2_PB_SVrefine2PB10Xhap12_11588;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4639:HG4_PB_SVrefine2PBcRDovetail_7914:HG4_PB_SVrefine2Falcon1Dovetail_9730:HG4_Ill_SVrefine2DISCOVARDovetail_11235:HG3_PB_SVrefine2PBcRDovetail_7568:HG3_PB_SVrefine2Falcon1Dovetail_9730:HG3_Ill_SVrefine2DISCOVARDovetail_11412:HG2_PB_SVrefine2PBcRplusDovetail_3933:HG2_PB_SVrefine2PB10Xhap12_11588;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0348205;ClusterMaxSizeDiff=0.0326442;ClusterMaxEditDist=0.156317;PBcalls=12;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=457;DistBack=2878;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=228;REFWIDENED=16:30763450-30763677;PctSeqSimilarity=0.9808;PctSizeSimilarity=0.9934;PctRecOverlap=0.8009;SizeDiff=3;StartDistance=-90;EndDistance=-90;GTMatch=0;TruScore=92;MatchId=2028.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:1:20:0:6:./.:0:1:0:1:./.:0:6:1/1:3:94:1676096:.:.
chr16	34781923	HG2_Ill_GATKHC_25488	T	TTATATATTATATATATAATATATATAAAATATATATTATATATTATATATATAATATATATAAAATATATATTATATATTATATATATAAAATATATATTATATATATTATATATATAAAATATATAATATATATAATATATATAATATATATATTATATATAATATATATATTATATATTATATATAATATATATTATATATAATATATATATTATATATTATATATAATATATATATAATATATTATATATATAATATATATATTATATATAATATATATTATATATATAATATATATATTATATATATAATATATATATAATATATATAATATATATAGTATATAATATATATATTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4226:HG2_Ill_GATKHCSBGrefine_10569:HG2_PB_SVrefine2PBcRplusDovetail_3952:HG3_PB_HySA_24239:HG4_Ill_GATKHC_25420:HG4_Ill_GATKHCSBGrefine_10930:HG2_Ill_GATKHC_25488:HG4_PB_pbsv_15962:HG3_PB_pbsv_15696:HG2_PB_pbsv_16042:HG2_Ill_SVrefine2DISCOVARplusDovetail_4659:HG3_PB_SVrefine2Falcon1Dovetail_9741:HG2_PB_SVrefine2PB10Xhap12_11609:HG2_PB_SVrefine2Falcon2Bionano_7885:HG4_Ill_SVrefine2DISCOVARDovetail_11251:HG4_PB_SVrefine2Falcon1Dovetail_9749:HG4_PB_SVrefine2PBcRDovetail_7930;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHC_25488:HG4_Ill_GATKHCSBGrefine_10930:HG4_Ill_GATKHC_25420;NumExactMatchSVs=3;ClusterMaxShiftDist=0.326154;ClusterMaxSizeDiff=0.326154;ClusterMaxEditDist=0.329231;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=360;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=179;REFWIDENED=16:34781819-34781997;PctSeqSimilarity=0.978;PctSizeSimilarity=0.9863;PctRecOverlap=0.989;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2029.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:1/1:2:44:0:15:./.:0:1:0:1:1/1:0:15:./.:5:61:.:.:.
chr16	50448282	HG4_Ill_150bpfermikitraw_20206	C	CCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4678:HG4_PB_pbsv_15981:HG4_Ill_GATKHC_25462:HG4_Ill_GATKHCSBGrefine_10942:HG4_Ill_150bpfermikitraw_20206:HG2_Ill_svaba_19921:HG2_Ill_scalpel_15092:HG2_Ill_Krunchall_21669:HG2_Ill_GATKHC_25538:HG2_Ill_GATKHCSBGrefine_10583:HG2_Ill_150bpfermikitraw_20104:HG2_PB_HySA_29287;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20104:HG2_Ill_GATKHCSBGrefine_10583:HG2_Ill_GATKHC_25538:HG2_Ill_Krunchall_21669:HG2_Ill_scalpel_15092:HG2_Ill_svaba_19921:HG4_Ill_150bpfermikitraw_20206:HG4_Ill_GATKHCSBGrefine_10942:HG4_Ill_GATKHC_25462;NumExactMatchSVs=9;ClusterMaxShiftDist=0.132075;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.150943;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=680;DistForward=11853;DistMin=680;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=43;REFWIDENED=16:50448277-50448319;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2030.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:25:0|1:34:2:2:22:./.:2:16:28:0:0/1:7:10:./.:.:.:.:.:.
chr16	53183654	HG2_PB_SVrefine2Falcon2Bionano_7902	T	TAGAAATGGGGTCTTGCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAATCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCAAGAGGCGGAGCTTGCAGTGAGCCGGGATAGCGCCACTGCAGTCCAGCTTGGGCGAAAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9922:HG4_PB_pbsv_15993:HG2_PB_pbsv_16068:HG2_PB_HySA_29321:HG4_PB_HySA_23442:HG2_PB_SVrefine2Falcon2Bionano_7902:HG2_PB_SVrefine2Falcon1plusDovetail_4344:HG4_PB_SVrefine2Falcon1Dovetail_9897;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7902;NumExactMatchSVs=1;ClusterMaxShiftDist=0.101587;ClusterMaxSizeDiff=0.101587;ClusterMaxEditDist=0.166667;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=318;DistBack=3320;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=16:53183655-53183670;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2034.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:31:1|0:0:24:29:0:1|0:0:8:26:0:0/1:23:12:0/1:9:31:.:.:.
chr16	53874969	HG4_Ill_MetaSV_1866	T	TAAGAAGTGCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_15725:HG4_PB_pbsv_15994:HG4_PB_assemblyticsfalcon_9579:HG3_PB_assemblyticsfalcon_9764:HG3_PB_HySA_24310:HG3_Ill_MetaSV_1920:HG2_PB_pbsv_16069:HG2_PB_HySA_29324:HG4_PB_SVrefine2Falcon1Dovetail_9898:HG3_Ill_GATKHCSBGrefine_10519:HG3_PB_SVrefine2PBcRDovetail_7756:HG3_PB_SVrefine2Falcon1Dovetail_9923:HG2_PB_SVrefine2PBcRplusDovetail_3983:HG2_PB_SVrefine2PB10Xhap12_11632:HG2_PB_SVrefine2Falcon2Bionano_7903:HG4_Ill_manta_3720:HG4_Ill_MetaSV_1866:HG4_Ill_GATKHCSBGrefine_10950:HG2_Ill_MetaSV_1810:HG2_Ill_GATKHCSBGrefine_10590:HG2_10X_SVrefine210Xhap12_11119:HG2_PB_SVrefine2Falcon1plusDovetail_4345:HG4_PB_HySA_23444:HG3_PB_HySA_24309:HG2_PB_PB10Xdip_12063;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11119:HG2_Ill_GATKHCSBGrefine_10590:HG2_Ill_MetaSV_1810:HG4_Ill_GATKHCSBGrefine_10950:HG4_Ill_MetaSV_1866:HG4_Ill_manta_3720;NumExactMatchSVs=6;ClusterMaxShiftDist=0.075188;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.193548;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=311;DistBack=32992;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=16:53874970-53874981;PctSeqSimilarity=0.9781;PctSizeSimilarity=0.9569;PctRecOverlap=0.9569;SizeDiff=-14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=2035.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:22:0:27:1/1:0:11:0:5:1/1:0:24:1/1:2:72:.:.:.
chr16	54378598	HG3_Ill_150bpfermikitraw_20180	T	TTCCATTAGACTCTGGGGCTCTATTGTCCTCAGGGAACTGGTCAGTCATTAGAACC	20	PASS	ClusterIDs=HG2_PB_pbsv_16072:HG3_Ill_Cortex_1350:HG2_Ill_Cortex_3170:HG3_Ill_svaba_20110:HG3_Ill_manta_3575:HG3_Ill_Spiral_16543:HG3_Ill_Krunchall_21276:HG3_Ill_GATKHC_25406:HG3_Ill_GATKHCSBGrefine_10522:HG3_Ill_250bpfermikitraw_20741:HG3_Ill_150bpfermikitraw_20180:HG2_Ill_svaba_19952:HG2_Ill_manta_4385:HG2_Ill_SpiralSDKrefine_6169:HG2_Ill_Krunchall_21701:HG2_Ill_GATKHC_25572:HG2_Ill_GATKHCSBGrefine_10592:HG2_Ill_250bpfermikitraw_21357:HG2_Ill_150bpfermikitraw_20133:HG2_PB_HySA_29334:HG3_PB_HySA_24319;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20133:HG2_Ill_250bpfermikitraw_21357:HG2_Ill_GATKHCSBGrefine_10592:HG2_Ill_GATKHC_25572:HG2_Ill_Krunchall_21701:HG2_Ill_SpiralSDKrefine_6169:HG2_Ill_manta_4385:HG2_Ill_svaba_19952:HG3_Ill_150bpfermikitraw_20180:HG3_Ill_250bpfermikitraw_20741:HG3_Ill_GATKHCSBGrefine_10522:HG3_Ill_GATKHC_25406:HG3_Ill_Krunchall_21276:HG3_Ill_Spiral_16543:HG3_Ill_manta_3575:HG3_Ill_svaba_20110;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.153846;PBcalls=3;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=16:54378597-54378599;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2036.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:21:0|1:13:1:0:19:0|1:15:0:0:26:0/1:31:32:./.:.:.:.:.:.
chr16	55721102	HG4_Ill_GATKHCSBGrefine_10957	T	TTTTAATCTTAACTTTACCTTGAAGTCAATTTCACATCCAGTAGTCGAATTACATTTCAATAGAAATACAAACTGTGGGTTTCAAAACTGTAATTAAATCAGCTTAATGGG	20	PASS	ClusterIDs=HG3_PB_pbsv_15732:HG3_PB_assemblyticsfalcon_9774:HG2_PB_pbsv_16076:HG4_PB_assemblyticsfalcon_9592:HG4_PB_SVrefine2PBcRDovetail_8028:HG4_Ill_manta_3722:HG4_Ill_SVrefine2DISCOVARDovetail_11293:HG4_Ill_MetaSV_1870:HG4_Ill_GATKHC_25508:HG4_Ill_GATKHCSBGrefine_10957:HG3_PB_SVrefine2PBcRDovetail_7759:HG3_PB_SVrefine2Falcon1Dovetail_9926:HG3_Ill_manta_3577:HG3_Ill_Spiral_16554:HG3_Ill_SVrefine2DISCOVARDovetail_11465:HG3_Ill_MetaSV_1921:HG3_Ill_GATKHCSBGrefine_10527:HG2_PB_SVrefine2PBcRplusDovetail_3986:HG2_PB_SVrefine2PB10Xhap12_11636:HG2_PB_SVrefine2Falcon2Bionano_7905:HG2_PB_SVrefine2Falcon1plusDovetail_4350:HG2_Ill_manta_4386:HG2_Ill_SpiralSDKrefine_6178:HG2_Ill_SVrefine2DISCOVARplusDovetail_4700:HG2_Ill_MetaSV_1812:HG2_Ill_GATKHCSBGrefine_10598:HG2_10X_SVrefine210Xhap12_11122:HG4_PB_SVrefine2Falcon1Dovetail_9903:HG2_PB_PB10Xdip_12066:HG2_Ill_breakscan11_4681:HG4_PB_pbsv_15998;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11122:HG2_Ill_GATKHCSBGrefine_10598:HG2_Ill_MetaSV_1812:HG2_Ill_SVrefine2DISCOVARplusDovetail_4700:HG2_Ill_SpiralSDKrefine_6178:HG2_Ill_manta_4386:HG2_PB_SVrefine2Falcon1plusDovetail_4350:HG2_PB_SVrefine2Falcon2Bionano_7905:HG2_PB_SVrefine2PB10Xhap12_11636:HG2_PB_SVrefine2PBcRplusDovetail_3986:HG3_Ill_GATKHCSBGrefine_10527:HG3_Ill_MetaSV_1921:HG3_Ill_SVrefine2DISCOVARDovetail_11465:HG3_Ill_Spiral_16554:HG3_Ill_manta_3577:HG3_PB_SVrefine2Falcon1Dovetail_9926:HG3_PB_SVrefine2PBcRDovetail_7759:HG4_Ill_GATKHCSBGrefine_10957:HG4_Ill_GATKHC_25508:HG4_Ill_MetaSV_1870:HG4_Ill_SVrefine2DISCOVARDovetail_11293:HG4_Ill_manta_3722:HG4_PB_SVrefine2PBcRDovetail_8028;NumExactMatchSVs=23;ClusterMaxShiftDist=0.079646;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.227074;PBcalls=14;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=110;DistBack=81796;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=16:55721103-55721103;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2037.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:0:20:1:29:1/1:0:35:1:34:1/1:0:47:./.:.:.:.:.:.
chr16	56577664	HG2_Ill_150bpfermikitraw_20148	A	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG2_PB_HySA_29352:HG3_Ill_scalpel_15412:HG3_Ill_Spiral_16560:HG3_Ill_Krunchall_21303:HG3_Ill_GATKHC_25435:HG3_Ill_GATKHCSBGrefine_10529:HG3_Ill_FB_13781:HG3_Ill_250bpfermikitraw_20765:HG3_Ill_150bpfermikitraw_20204:HG2_Ill_Krunchall_21715:HG2_Ill_GATKHC_25591:HG2_Ill_GATKHCSBGrefine_10600:HG2_Ill_FB_13820:HG2_Ill_250bpfermikitraw_21373:HG2_Ill_150bpfermikitraw_20148;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20148:HG2_Ill_250bpfermikitraw_21373:HG2_Ill_FB_13820:HG2_Ill_GATKHCSBGrefine_10600:HG2_Ill_GATKHC_25591:HG2_Ill_Krunchall_21715:HG3_Ill_150bpfermikitraw_20204:HG3_Ill_250bpfermikitraw_20765:HG3_Ill_FB_13781:HG3_Ill_GATKHCSBGrefine_10529:HG3_Ill_GATKHC_25435:HG3_Ill_Krunchall_21303:HG3_Ill_Spiral_16560:HG3_Ill_scalpel_15412;NumExactMatchSVs=14;ClusterMaxShiftDist=0.109091;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.181818;PBcalls=1;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=16;DistForward=13100;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=16:56577663-56577667;PctSeqSimilarity=0.9739;PctSizeSimilarity=0.9444;PctRecOverlap=0.8909;SizeDiff=-3;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=93;MatchId=2038.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:./.:9:18:13:7:./.:1:4:9:0:0/1:17:26:./.:.:.:.:.:.
chr16	58153804	HG4_PB_pbsv_16015	A	AATAAGTGCCCACCTTCACTCGCCATCTGACTGCTTCCCAACCTTAAGTGCCCACCTCACTCGCCATCTACTTTCCCAACCTAAGTGCCCACCTCACTCGCCATCTCATGTTCCCAACCTAAGCTGCCCACCTTCACTTCGCCATCTCATGTTTCCCAAACCTAAATGTCCACCTTCACTCGCCATCTCATGCTCCCAAACTAAGTGCCCACCTCACTCGCCATCTCCATGCTTCCCAACAAGTGGCCCACCTCACTCGCCATCTCATGTCCCAACCTTAAGTGCCCACCTCACCGCCATCTCATGTTCCCAACCTAAGTGCCCACCTCACTCGCCATTCTTACTGCCTTCCCAACCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9913:HG3_PB_pbsv_15751:HG2_PB_pbsv_16094:HG4_PB_pbsv_16015:HG3_PB_SVrefine2Falcon1Dovetail_9933;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_16015;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0541311;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.161017;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=357;DistBack=76;DistForward=55;DistMin=55;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=279;REFWIDENED=16:58153655-58153933;PctSeqSimilarity=0.9647;PctSizeSimilarity=0.958;PctRecOverlap=0.7311;SizeDiff=15;StartDistance=89;EndDistance=89;GTMatch=0;TruScore=88;MatchId=2039.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:76:0|1:11:2:0:26:0/0:5:0:7:0:0/0:18:0:./.:3:5:.:.:.
chr16	58620148	HG2_PB_SVrefine2Falcon2Bionano_7914	C	CGGAGGGGAGGGGAGGCGAGGGAGGGGAGGGGGGAGAGGTGTGGGGGTGGGGAGGGGGAGGGGAGGGGAAGGGGAGGAGAGGGAGAGGGGAAGGGGAGGGAGGGGGAGGGAGGGGGAGGGGAGGGCAGGGGGAGGGGAGGGGAGGGCAGGGGGAGGGGAAGGGGAGGGCAGGGGGAGGGGAAGGGGAGGGCAGGGGGAGGGGAGGGGGAGGGGAAGGGGAGGGCAGGGGGAGGGGAAGGGGAGGGCAGGGGGAGGGAAGGGAAGGGCAGGGGAGGGGAGGGGGACTGGAGGGGAGGGGACGGGAGGGGGAGGGGGAGGGGAGGGGGGACTGGAGGGGAGGGGAGGGAAGGGGAAGGGAAGGGGAGGGGAAGGGGATGGAGGGGAAGGGGAGGAGAGGGAGAGGGAAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4361:HG3_PB_SVrefine2PBcRDovetail_7770:HG2_PB_PB10Xdip_12077:HG2_PB_pbsv_16096:HG2_PB_SVrefine2PB10Xhap12_11654:HG3_PB_pbsv_15754:HG4_PB_pbsv_16017:HG4_PB_SVrefine2PBcRDovetail_8040:HG4_PB_SVrefine2Falcon1Dovetail_9915:HG3_PB_SVrefine2Falcon1Dovetail_9934:HG2_PB_SVrefine2Falcon2Bionano_7914:HG2_PB_SVrefine2PBcRplusDovetail_3994:HG2_PB_SVrefine2PB10Xhap12_11653;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7914;NumExactMatchSVs=1;ClusterMaxShiftDist=0.179384;ClusterMaxSizeDiff=0.179384;ClusterMaxEditDist=0.299213;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=406;DistBack=-227;DistForward=190;DistMin=-227;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=228;REFWIDENED=16:58620149-58620376;PctSeqSimilarity=0.9628;PctSizeSimilarity=0.9902;PctRecOverlap=0.6156;SizeDiff=-4;StartDistance=-156;EndDistance=-156;GTMatch=1;TruScore=85;MatchId=2040.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:36:1/1:2:18:0:14:./.:1:0:1:0:./.:5:0:./.:2:5:.:.:.
chr16	59346468	HG2_Ill_250bpfermikitraw_21416	T	TTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_11310:HG4_Ill_GATKHC_25566:HG2_PB_pbsv_16103:HG4_Ill_GATKHCSBGrefine_10980:HG4_Ill_250bpfermikitraw_21076:HG2_Ill_svaba_19999:HG2_Ill_GATKHC_25634:HG2_Ill_GATKHCSBGrefine_10617:HG2_Ill_250bpfermikitraw_21416;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21416:HG2_Ill_GATKHCSBGrefine_10617:HG2_Ill_GATKHC_25634:HG2_Ill_svaba_19999:HG4_Ill_250bpfermikitraw_21076:HG4_Ill_GATKHCSBGrefine_10980:HG4_Ill_GATKHC_25566;NumExactMatchSVs=7;ClusterMaxShiftDist=0.163265;ClusterMaxSizeDiff=0.122449;ClusterMaxEditDist=0.265306;PBcalls=1;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=-1;DistForward=5;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=7;REFWIDENED=16:59346467-59346476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2042.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:0|1:25:5:1:20:./.:18:0:2:8:0/1:29:22:./.:.:.:.:.:.
chr16	59697227	HG4_Ill_SVrefine2DISCOVARDovetail_11312	T	TGGGCCCTAATATTATAAAGATATTTCCCTGCAGGTTTTGAGCTGGAAGGGTTGGTTATGCCTGTGCTGGTGTCCTCAGATTTTCTAGCCACA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4682:HG3_PB_pbsv_15758:HG2_PB_pbsv_16104:HG4_PB_pbsv_16023:HG2_PB_SVrefine2PBcRplusDovetail_3998:HG2_PB_assemblyticsfalcon_9837:HG2_PB_HySA_29391:HG4_PB_SVrefine2Falcon1Dovetail_9918:HG4_Ill_svaba_19979:HG4_Ill_manta_3728:HG4_Ill_SVrefine2DISCOVARDovetail_11312:HG4_Ill_Krunchall_22081:HG4_Ill_GATKHCSBGrefine_10981:HG4_Ill_Cortex_1309:HG4_Ill_250bpfermikitraw_21078:HG3_PB_SVrefine2PBcRDovetail_7774:HG3_PB_SVrefine2Falcon1Dovetail_9937:HG3_Ill_svaba_20161:HG3_Ill_manta_3584:HG3_Ill_Spiral_16588:HG3_Ill_SVrefine2DISCOVARDovetail_11489:HG3_Ill_Krunchall_21344:HG3_Ill_GATKHC_25472:HG3_Ill_GATKHCSBGrefine_10546:HG3_Ill_Cortex_1361:HG3_Ill_250bpfermikitraw_20798:HG3_Ill_150bpfermikitraw_20237:HG2_PB_SVrefine2Falcon1plusDovetail_4366:HG2_Ill_svaba_20001:HG2_Ill_manta_4397:HG2_Ill_SpiralSDKrefine_6200:HG2_Ill_Krunchall_21759:HG2_Ill_GATKHCSBGrefine_10618:HG2_Ill_Cortex_3189:HG2_Ill_250bpfermikitraw_21419:HG2_Ill_150bpfermikitraw_20194:HG2_10X_SVrefine210Xhap12_11144:HG4_PB_HySA_23492;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11144:HG2_Ill_150bpfermikitraw_20194:HG2_Ill_250bpfermikitraw_21419:HG2_Ill_Cortex_3189:HG2_Ill_GATKHCSBGrefine_10618:HG2_Ill_Krunchall_21759:HG2_Ill_SpiralSDKrefine_6200:HG2_Ill_manta_4397:HG2_Ill_svaba_20001:HG2_PB_SVrefine2Falcon1plusDovetail_4366:HG3_Ill_150bpfermikitraw_20237:HG3_Ill_250bpfermikitraw_20798:HG3_Ill_Cortex_1361:HG3_Ill_GATKHCSBGrefine_10546:HG3_Ill_GATKHC_25472:HG3_Ill_Krunchall_21344:HG3_Ill_SVrefine2DISCOVARDovetail_11489:HG3_Ill_Spiral_16588:HG3_Ill_manta_3584:HG3_Ill_svaba_20161:HG3_PB_SVrefine2Falcon1Dovetail_9937:HG3_PB_SVrefine2PBcRDovetail_7774:HG4_Ill_250bpfermikitraw_21078:HG4_Ill_Cortex_1309:HG4_Ill_GATKHCSBGrefine_10981:HG4_Ill_Krunchall_22081:HG4_Ill_SVrefine2DISCOVARDovetail_11312:HG4_Ill_manta_3728:HG4_Ill_svaba_19979:HG4_PB_SVrefine2Falcon1Dovetail_9918;NumExactMatchSVs=30;ClusterMaxShiftDist=0.163934;ClusterMaxSizeDiff=0.163934;ClusterMaxEditDist=0.20765;PBcalls=11;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=92;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=16:59697228-59697230;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2043.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:44:0|1:22:3:1:30:1|0:1:30:24:0:0/1:25:18:./.:.:.:.:.:.
chr16	60041147	HG2_Ill_MetaSV_1816	T	TGGAAGAAAAGTTTTCTTTTTTTTCTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_23498:HG3_PB_HySA_24369:HG2_PB_PB10Xdip_12081:HG2_PB_HySA_29402:HG2_PB_pbsv_16108:HG3_PB_pbsv_15762:HG2_PB_HySA_29401:HG4_PB_pbsv_16027:HG4_PB_SVrefine2Falcon1Dovetail_9921:HG2_PB_SVrefine2PB10Xhap12_11660:HG3_PB_SVrefine2Falcon1Dovetail_9941:HG4_Ill_manta_3731:HG4_Ill_MetaSV_1877:HG2_PB_SVrefine2Falcon1plusDovetail_4371:HG2_Ill_MetaSV_1816:HG3_Ill_MetaSV_1930:HG4_PB_SVrefine2PBcRDovetail_8044;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_1816:HG2_PB_SVrefine2Falcon1plusDovetail_4371:HG4_Ill_MetaSV_1877:HG4_Ill_manta_3731;NumExactMatchSVs=4;ClusterMaxShiftDist=0.2272;ClusterMaxSizeDiff=0.2272;ClusterMaxEditDist=0.2432;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=745;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=16:60041148-60041162;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2044.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:35:0|1:20:1:0:29:0|1:20:0:0:9:0/1:27:10:0/1:7:31:.:.:.
chr16	61616291	HG2_Ill_250bpfermikitraw_21440	A	AGCAAGACTGTCTCAAGAAAAAAGTGCCCAGTTATGCTGGCTTATTTGTTTATTTTTTTCTATTCCACTAGTCTTTCTTTCCTTATCCTTGGGCCAAAAAACTAAGGAT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1820:HG3_PB_HySA_24383:HG2_PB_assemblyticsfalcon_9857:HG2_PB_PB10Xdip_12083:HG4_PB_SVrefine2Falcon1Dovetail_9925:HG4_Ill_SVrefine2DISCOVARDovetail_11322:HG4_Ill_GATKHCSBGrefine_10994:HG3_PB_SVrefine2PBcRDovetail_7780:HG3_PB_SVrefine2Falcon1Dovetail_9944:HG3_Ill_SVrefine2DISCOVARDovetail_11504:HG3_Ill_GATKHCSBGrefine_10560:HG2_PB_SVrefine2PBcRplusDovetail_4005:HG2_PB_SVrefine2PB10Xhap12_11665:HG2_PB_SVrefine2Falcon2Bionano_7921:HG2_PB_SVrefine2Falcon1plusDovetail_4374:HG2_Ill_SVrefine2DISCOVARplusDovetail_4731:HG2_Ill_GATKHCSBGrefine_10635:HG2_Ill_250bpfermikitraw_21440:HG2_Ill_150bpfermikitraw_20215:HG2_10X_SVrefine210Xhap12_11154:HG4_Ill_manta_3733:HG3_Ill_manta_3590:HG3_Ill_Spiral_16600:HG2_Ill_manta_4402:HG2_Ill_SpiralSDKrefine_6217:HG4_PB_pbsv_16032:HG2_PB_pbsv_16115:HG3_PB_pbsv_15768:HG2_PB_HySA_29417:HG4_PB_HySA_23502:HG4_Ill_MetaSV_1879:HG3_Ill_MetaSV_1934;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11154:HG2_Ill_150bpfermikitraw_20215:HG2_Ill_250bpfermikitraw_21440:HG2_Ill_GATKHCSBGrefine_10635:HG2_Ill_SVrefine2DISCOVARplusDovetail_4731:HG2_PB_SVrefine2Falcon1plusDovetail_4374:HG2_PB_SVrefine2Falcon2Bionano_7921:HG2_PB_SVrefine2PB10Xhap12_11665:HG2_PB_SVrefine2PBcRplusDovetail_4005:HG3_Ill_GATKHCSBGrefine_10560:HG3_Ill_SVrefine2DISCOVARDovetail_11504:HG3_PB_SVrefine2Falcon1Dovetail_9944:HG3_PB_SVrefine2PBcRDovetail_7780:HG4_Ill_GATKHCSBGrefine_10994:HG4_Ill_SVrefine2DISCOVARDovetail_11322:HG4_PB_SVrefine2Falcon1Dovetail_9925;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0829493;ClusterMaxSizeDiff=0.0639269;ClusterMaxEditDist=0.197309;PBcalls=15;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=108;DistBack=-1;DistForward=55262;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=16:61616292-61616292;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2045.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:./.:0:0:0:0:1/1:0:12:0:15:1/1:0:33:./.:.:.:.:.:.
chr16	64104815	HG4_Ill_250bpfermikitraw_21123	T	TAATCAGCAAGTGGTAATGTTTTAGAGTTATGAGGGATCTCACAGATTGTAGAAATTAAAGCTCAGAATTGGGAACAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4683:HG2_PB_pbsv_16121:HG4_PB_pbsv_16041:HG2_PB_HySA_29434:HG4_PB_SVrefine2PBcRDovetail_8049:HG4_Ill_svaba_20011:HG4_Ill_manta_3737:HG4_Ill_SVrefine2DISCOVARDovetail_11332:HG4_Ill_Krunchall_22125:HG4_Ill_GATKHC_25618:HG4_Ill_GATKHCSBGrefine_11001:HG4_Ill_Cortex_1314:HG4_Ill_250bpfermikitraw_21123:HG4_Ill_150bpfermikitraw_20346:HG2_PB_SVrefine2Falcon2Bionano_7926:HG2_Ill_svaba_20036:HG2_Ill_manta_4404:HG2_Ill_SpiralSDKrefine_6233:HG2_Ill_Krunchall_21799:HG2_Ill_GATKHC_25684:HG2_Ill_GATKHCSBGrefine_10640:HG2_Ill_Cortex_3205:HG2_Ill_250bpfermikitraw_21462:HG2_Ill_150bpfermikitraw_20236:HG2_10X_SVrefine210Xhap12_11164;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11164:HG2_Ill_150bpfermikitraw_20236:HG2_Ill_250bpfermikitraw_21462:HG2_Ill_Cortex_3205:HG2_Ill_GATKHCSBGrefine_10640:HG2_Ill_GATKHC_25684:HG2_Ill_Krunchall_21799:HG2_Ill_SpiralSDKrefine_6233:HG2_Ill_manta_4404:HG2_Ill_svaba_20036:HG2_PB_SVrefine2Falcon2Bionano_7926:HG4_Ill_150bpfermikitraw_20346:HG4_Ill_250bpfermikitraw_21123:HG4_Ill_Cortex_1314:HG4_Ill_GATKHCSBGrefine_11001:HG4_Ill_GATKHC_25618:HG4_Ill_Krunchall_22125:HG4_Ill_SVrefine2DISCOVARDovetail_11332:HG4_Ill_manta_3737:HG4_Ill_svaba_20011;NumExactMatchSVs=20;ClusterMaxShiftDist=0.147651;ClusterMaxSizeDiff=0.120805;ClusterMaxEditDist=0.201342;PBcalls=5;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=77;DistBack=117552;DistForward=95032;DistMin=95032;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=16:64104816-64104818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2047.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:34:0|1:37:1:0:30:1|0:0:32:32:0:0/1:34:29:./.:.:.:.:.:.
chr16	64199848	HG2_PB_SVrefine2Falcon2Bionano_7927	A	AATAATATATAATTATTATAATATTATATATTATATAATATATAATTATTATATTATATATTATGTAATATATAATTATTATATTATACAATATATAATATATAATTATTATATTATACATTATATAATATATAATTATTATATTATACATTATATAATATATAATTATTATATTATACATTATATAATATATAATTATTATATTATACATTATATAATATATAATTATTATATTATACATTATATAATATATAATTATTATATTATACATTATATAATATATAATTATTATATTGTATATTATATAATATATAATTATTATATTGTATATTATATAATATATAATTATTATATTGTATATTATATAATATATAATTATTATATTGTATATTATATAATATATAATTATTATATTGTATATTAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8050:HG2_PB_pbsv_16122:HG2_PB_SVrefine2Falcon1plusDovetail_4378:HG3_PB_HySA_24404:HG2_PB_SVrefine2PB10Xhap12_11670:HG3_PB_pbsv_15776:HG2_PB_SVrefine2Falcon2Bionano_7927:HG4_PB_pbsv_16042:HG2_PB_SVrefine2PBcRplusDovetail_4009:HG3_PB_SVrefine2Falcon1Dovetail_9950:HG3_PB_SVrefine2PBcRDovetail_7785:HG4_PB_SVrefine2Falcon1Dovetail_9934;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7927:HG2_PB_SVrefine2PB10Xhap12_11670;NumExactMatchSVs=2;ClusterMaxShiftDist=0.1522;ClusterMaxSizeDiff=0.145411;ClusterMaxEditDist=0.247914;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=423;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=264;REFWIDENED=16:64199849-64200112;PctSeqSimilarity=0.985;PctSizeSimilarity=0.9835;PctRecOverlap=0.6501;SizeDiff=7;StartDistance=-145;EndDistance=-145;GTMatch=0;TruScore=87;MatchId=2048.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:90:1/1:3:39:0:8:./.:0:1:0:3:1/1:0:36:./.:3:34:.:.:.
chr16	64240129	HG3_PB_SVrefine2Falcon1Dovetail_9951	G	GGGTGAAGTGGGCAGGGTGGGGGGGTGGGGGGTGGGGTGTGGGAGTGGTGGGGTGGGTGGGGTGGGGGGTCGGAGTGGTGGAGGGGTGGGGGTGGGGGGGTCGGAGTGGTGGAGGGGGTGGGGGTGGGGGGGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8051:HG2_PB_SVrefine2PB10Xhap12_11671:HG2_PB_SVrefine2PB10Xhap12_11672:HG4_PB_SVrefine2Falcon1Dovetail_9935:HG3_PB_SVrefine2Falcon1Dovetail_9951:HG2_PB_SVrefine2Falcon1plusDovetail_4379:HG2_PB_HySA_29437:HG3_PB_SVrefine2PBcRDovetail_7786:HG2_PB_SVrefine2PBcRplusDovetail_4010:HG2_PB_SVrefine2Falcon2Bionano_7928:HG3_PB_HySA_24405:HG3_PB_pbsv_15777;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_9951:HG4_PB_SVrefine2Falcon1Dovetail_9935;NumExactMatchSVs=2;ClusterMaxShiftDist=0.273504;ClusterMaxSizeDiff=0.273504;ClusterMaxEditDist=0.372294;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=132;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=16:64240130-64240129;PctSeqSimilarity=0.9778;PctSizeSimilarity=0.9706;PctRecOverlap=0.9708;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=97;MatchId=2049.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:3:23:2:24:1/1:0:7:0:7:./.:0:2:./.:.:.:.:.:.
chr16	65482187	HG2_Ill_SVrefine2DISCOVARplusDovetail_4748	A	ACAGAAAACAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTAAAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_23541:HG2_PB_pbsv_16128:HG2_PB_PB10Xdip_12390:HG4_PB_pbsv_16047:HG4_PB_SVrefine2PBcRDovetail_8053:HG3_PB_pbsv_15781:HG4_Ill_SVrefine2DISCOVARDovetail_11337:HG4_Ill_MetaSV_1882:HG4_Ill_GATKHCSBGrefine_11004:HG3_Ill_SVrefine2DISCOVARDovetail_11525:HG3_Ill_MetaSV_1936:HG3_Ill_GATKHCSBGrefine_10572:HG2_PB_SVrefine2PBcRplusDovetail_4014:HG2_PB_SVrefine2PB10Xhap12_11677:HG2_PB_SVrefine2Falcon2Bionano_7933:HG2_Ill_SVrefine2DISCOVARplusDovetail_4748:HG2_Ill_MetaSV_1822:HG2_Ill_GATKHCSBGrefine_10644:HG2_PB_SVrefine2Falcon1plusDovetail_4384:HG4_PB_SVrefine2Falcon1Dovetail_9940:HG2_PB_HySA_29455;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10644:HG2_Ill_MetaSV_1822:HG2_Ill_SVrefine2DISCOVARplusDovetail_4748:HG2_PB_SVrefine2Falcon2Bionano_7933:HG2_PB_SVrefine2PB10Xhap12_11677:HG2_PB_SVrefine2PBcRplusDovetail_4014:HG3_Ill_GATKHCSBGrefine_10572:HG3_Ill_MetaSV_1936:HG3_Ill_SVrefine2DISCOVARDovetail_11525:HG4_Ill_GATKHCSBGrefine_11004:HG4_Ill_MetaSV_1882:HG4_Ill_SVrefine2DISCOVARDovetail_11337:HG4_PB_SVrefine2PBcRDovetail_8053;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0496894;ClusterMaxSizeDiff=0.0434783;ClusterMaxEditDist=0.207317;PBcalls=12;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=315;DistBack=39536;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=16:65482188-65482204;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2050.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:94:./.:0:1:0:0:./.:0:0:0:0:1/1:0:18:1/1:2:54:.:.:.
chr16	65486276	HG2_PB_SVrefine2Falcon2Bionano_7934	A	AAGGAAGGAAGGACGGGGAGGGAGGGAGGGAGATAGGGGAGGGAGGGAGGGAGGAAGGAAGGAAGGATGGGGAGGGAGGGAGGGAGATAGGGGAGGGAGGGAGGGAGGG	10	PASS	ClusterIDs=HG4_PB_HySA_23542:HG2_PB_SVrefine2Falcon1plusDovetail_4385:HG4_PB_SVrefine2PBcRDovetail_8054:HG4_PB_SVrefine2Falcon1Dovetail_9941:HG2_PB_SVrefine2PBcRplusDovetail_4015:HG2_PB_SVrefine2PB10Xhap12_11678:HG2_PB_SVrefine2Falcon2Bionano_7934:HG2_PB_PB10Xdip_12391:HG2_PB_HySA_29456:HG3_PB_pbsv_15782;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7934:HG2_PB_SVrefine2PB10Xhap12_11678:HG2_PB_SVrefine2PBcRplusDovetail_4015:HG4_PB_SVrefine2PBcRDovetail_8054;NumExactMatchSVs=4;ClusterMaxShiftDist=0.191388;ClusterMaxSizeDiff=0.191388;ClusterMaxEditDist=0.210526;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=108;DistBack=9;DistForward=10;DistMin=9;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=131;REFWIDENED=16:65486207-65486337;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2051.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:./.:0:2:0:0:./.:0:0:0:0:0/1:1:8:./.:.:.:.:.:.
chr16	67185945	HG2_Ill_SVrefine2DISCOVARplusDovetail_4756	G	GGGCTATATCTGCTCCTGACGGCTTCTTCCCACCAATGTTCAATCTTAAAAAGCCACCTCTCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11170:HG2_PB_pbsv_16134:HG3_PB_HySA_24440:HG3_PB_pbsv_15789:HG2_PB_HySA_29465:HG3_Ill_svaba_20228:HG3_Ill_manta_3594:HG3_Ill_SVrefine2DISCOVARDovetail_11532:HG3_Ill_Krunchall_21408:HG3_Ill_GATKHC_25547:HG3_Ill_GATKHCSBGrefine_10581:HG3_Ill_250bpfermikitraw_20867:HG2_Ill_svaba_20057:HG2_Ill_manta_4408:HG2_Ill_SVrefine2DISCOVARplusDovetail_4756:HG2_Ill_Krunchall_21820:HG2_Ill_GATKHC_25705:HG2_Ill_GATKHCSBGrefine_10647:HG2_Ill_250bpfermikitraw_21482:HG2_Ill_150bpfermikitraw_20253;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11170:HG3_Ill_svaba_20228:HG3_Ill_manta_3594:HG3_Ill_SVrefine2DISCOVARDovetail_11532:HG3_Ill_Krunchall_21408:HG3_Ill_GATKHC_25547:HG3_Ill_GATKHCSBGrefine_10581:HG3_Ill_250bpfermikitraw_20867:HG2_Ill_svaba_20057:HG2_Ill_manta_4408:HG2_Ill_SVrefine2DISCOVARplusDovetail_4756:HG2_Ill_Krunchall_21820:HG2_Ill_GATKHC_25705:HG2_Ill_GATKHCSBGrefine_10647:HG2_Ill_250bpfermikitraw_21482:HG2_Ill_150bpfermikitraw_20253;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0775194;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.263566;PBcalls=4;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=62;DistBack=151544;DistForward=70574;DistMin=70574;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=16:67185946-67186011;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2053.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:18:1|0:2:10:16:0:./.:0:10:13:1:0/1:24:21:./.:.:.:.:.:.
chr16	67843101	HG2_PB_SVrefine2PB10Xhap12_11681	G	GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACGAGGTCAGGAGATCGAGGCCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGCCGTGGTGGCGGGTGCCTATAGTCTCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCAGAGCTTGCAGTGAGCCAAGATCTCGCCACTGCACTCCAGTCTGGGTGACAGAGCGAGACTCCATCTCAAAAAAAAAAGCACAGCCAGGCACGGTGGCTCACCCCTATAATCCTATTACTTTGGGAGGCCAAGGCAGGCAGATTGCCTGAGCTCAGGAGTTCGAGACCAGGCTAGACAATATGGCAAAAACCCTGTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGTCTCCCAAGCAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAAAAAAAACCCTGTTTCTAATAGCAATACAAAATATTGGCCAGGCACA	20	PASS	ClusterIDs=HG3_PB_pbsv_15792:HG3_PB_HySA_24442:HG2_PB_pbsv_16137:HG2_PB_PB10Xdip_12395:HG4_PB_pbsv_16057:HG3_Ill_MetaSV_1939:HG4_PB_SVrefine2PBcRDovetail_8062:HG3_PB_SVrefine2PBcRDovetail_7790:HG3_Ill_SVrefine2DISCOVARDovetail_11533:HG2_PB_SVrefine2PBcRplusDovetail_4018:HG2_PB_SVrefine2PB10Xhap12_11681:HG2_PB_SVrefine2Falcon2Bionano_7937:HG4_Ill_MetaSV_1884:HG2_PB_SVrefine2Falcon1plusDovetail_4389:HG4_PB_SVrefine2Falcon1Dovetail_9946:HG2_PB_HySA_29469:HG3_PB_SVrefine2Falcon1Dovetail_9961:HG4_PB_HySA_23559;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7937:HG2_PB_SVrefine2PB10Xhap12_11681:HG2_PB_SVrefine2PBcRplusDovetail_4018:HG3_Ill_SVrefine2DISCOVARDovetail_11533;NumExactMatchSVs=4;ClusterMaxShiftDist=0.104864;ClusterMaxSizeDiff=0.102337;ClusterMaxEditDist=0.219902;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=758;DistBack=55;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=291;REFWIDENED=16:67843102-67843392;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2054.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:0:22:0:10:./.:0:5:0:3:1/1:0:24:1/1:3:144:.:1017:.
chr16	68640994	HG4_PB_pbsv_16059	A	ATATGGTTAACTATTTTCGTTAAATATTTAGATAAATATTTGTTTAACATATTTAGATAAATATTTGTTAAATATTTTAGATAAATATTTGGTTTAAATATTAGATAAAATATTTGTTAATATTTAGATAAATTTTGTTAAATATTTAGATAAATATTTGTTAAATATTTAGTTAAATATTTGTTAAAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9962:HG4_PB_pbsv_16059:HG2_PB_pbsv_16138:HG2_PB_SVrefine2Falcon1plusDovetail_4390:HG4_PB_SVrefine2Falcon1Dovetail_9947;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_16059;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0633245;ClusterMaxSizeDiff=0.0474934;ClusterMaxEditDist=0.21875;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=188;DistBack=-340;DistForward=130;DistMin=-340;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=361;REFWIDENED=16:68640979-68641339;PctSeqSimilarity=0.9531;PctSizeSimilarity=0.9787;PctRecOverlap=0.963;SizeDiff=4;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=96;MatchId=2055.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:1|0:3:20:25:6:0/0:10:0:7:0:0/0:29:0:./.:.:.:.:.:.
chr16	69191805	HG2_PB_PB10Xdip_12398	T	CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAAAAGTATT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4021:HG2_PB_pbsv_16141:HG2_PB_PB10Xdip_12398:HG2_PB_SVrefine2PB10Xhap12_11685:HG4_PB_pbsv_16061:HG2_PB_SVrefine2Falcon1plusDovetail_4393:HG4_PB_SVrefine2PBcRDovetail_8065;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_12398;NumExactMatchSVs=1;ClusterMaxShiftDist=0.217105;ClusterMaxSizeDiff=0.217105;ClusterMaxEditDist=0.262023;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=321;DistBack=-3;DistForward=258;DistMin=-3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=44;REFWIDENED=16:69191761-69191804;PctSeqSimilarity=0.997;PctSizeSimilarity=1;PctRecOverlap=0.9657;SizeDiff=0;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=98;MatchId=2056.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:15:0|1:14:0:0:10:0|1:29:0:1:8:0/1:24:5:0/1:11:21:.:.:.
chr16	69225315	HG2_PB_pbsv_16142	C	CACAATTAGCTGGGTGTAGTGCGCAAATTGTAGTCCCAGCGTACTTGAGAGCTAGTGGATCACATGACCCCAGGAGGTTGAGGCTGCAGGGAGGCCATGATTGCACAACACTGCATTTCAGCCTGGGTGAAACAGAAAACGCTGCCAATAAATAAATAAACAGAGTCTCGCTCTGTTGCTTAGCTGGGAGTGCAGCTAGAACAGTGTTTGCTGTTCTCACTGACTATTCGGAAGATCCAATCAGTGCTCCTGGCTAGGTTAGTACACTGTGGTAACCAACTGGACCAACAAATAATGCTCTTGCTTGCGTCTTCCACCTAAAAATAGTATAATAATGTCTTACATTTTAATTCAGGATTTAAAATTATGCATTTTATTTATTTTGAAGACAGGGGCCTCTCTCCGTTGCCCAAACTGGAGATTGTATGCGTGATCAACAGTTCACTGCAGCCTCAACCTCTTGGTCAAGCAATCCTCCCACCTCAGCGCCTCCAAGTAGCATGACTAACAGTGTGCACCGCCATGCCACTAATTTTTTTTTTTTTTTGAAGACGGAGTCTTGCTGTGATTCACACTACACTCTGTCGGAGTGCAATGCTGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCACCTCCTGAGAGCTGGAACTACAGGCGCATGCCACCCATGCCCAGCCTAATTTTTTGTTTGTATTTTTTAGTAGAACGGGTTTCAACCATCATTAACCAGGTTGGTCTTGATCTCCGGACCTTTTGATCCGCCCACCTCAGTCCAAAGTGTTGGATTACAGGGGGTGAGCCAGCTGCACCCAGCCTGGCTAATGTTTTATTTTTAGTTTTTTTTTTTGTAGAACAGGGTCTCCACTATGTTGGCCCAGGCTGGTCTGGAGCTCCTGGGCTCAAGCAATCCTTCCGGCCATGACTCTCTCCACAGTTTGGGATTATAGGCATGAGCCAATGCCACACATGGCCTGTTCTATATCGTAGTATCTATATTTTCTCTTTGATTTTTATTCAGTCTCTGAGATAGGCTTCTATATTTGTTGTATAAATGAGTAAAAACTGAGTTTCACCAAGTTAATATGAGTTCCTGTAAAGTCCTCGAAATTCTCTTGATTTTAGGAAATTTTTAATTTCATTTGGAAGTAGAAGAAATCCTTACCTGGATGTTTAAAAGTTGGTAATGTCTGATGCTTATAGATAAGAATGAACCACCCAGAGTTTAAGTGACATTGTTAAGGGTTCACCTGACAAAATTAGTTGGTGGCAAAGTTGTACTAAAACCCAGTCCAGTGCTTTCCGCCCCCCTTGACGGTGGCTACGTAATCAACTTAATCAGTCATATTCTTTAGCATCTCCTGTGTCTTTGTTATGTGTAGTGTGCTTGTGAGAGATCAATGGGCCCAAAGTAAAATGAAGATGGTCCTTGGCATCAAATCATTAGAGAGAAACTAGGAAAAATAAGTACCCCATGGCCAGTCGGTGCCACACCTGTAAATCCAGCACTTTGGGAGGCCGAGGCGCGATCACAACGGTCAGGGAGTTCGAGAGCCAAAGCCTGGCCAATATGGGGAAACCCCCATCTCTACTAAAAATACAAAAATTAGTCAGGCGTGAGCTGTGCACCTTGTGATCCCAGCTACTCGGGTGCAGCTGAGGCAGTGGAGAATCACTTGAACCCAGGAGCGGAGGTTGCAGATATGCACCACTGTACTCCATGCCTGTGGTGACAGCGGAGACCTGTCTTCAAAAAAGAAAAGAAAAAGCAAGAAGAAAACGCACCCCATCAGAAATAGTTGCTAAAGTGTGTAAAACTCACTCTTCAATAGTACACTAAAGGAATGGATTAATTGGTGGGATGAAAGAATTGAGTATGACTTTCCTTAGGGAAAGGAGACATGCCTTGAGGACAAAAAAGGGGGGGGGCACCTTTTTTTTTTTTTTTTTTTCCTTTTGTTAAAAGGGGGGGGGGGGGGGGAAAAAAAAAAACTTTTGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAGTTTTCCAGGAGTTTTCAAGTTAGGGATGGCCTGAAAACAGAAAGCCAAAAATGAGCATGACATTATGATACAAAGTGGGGAATGGTCTTCATGGTATGGACTTGAGGAAGAAATAAAGTTGGGTAGATAGATGAAGCCAGATTATGCAAGTTATTGAAAGCCAACCAGAGGAATTTGTCAGACCATTTCATTCTGCAACATTCTTTATTTATTTATGTTTTATGTTATTTATTTATTTTTAGTACGAACTCTTTGCTCTAGTCACCCAGGCTGCGAGACAGTGCGCCTATCTTGGCTTCACGGCAACCTCCGCCTCCCGGGTTCAAGGCTTCTCCTGCCTCAGCCCCCGAGAAGGTAGCGGGGATCACAGGCACCTGCCACCGCACTGGGTTAATTTTGTATTTTTATGAGAGTTTGGATTTTCACCATCTTGCCAGACTTGTCTGCAACTCCTGACTCTGATCCACCCACCTCGGCCTCCGAAAGTGCGTGGGTTCAGGAATGAGCCACCACCCCCGGCCCTCAACATTTATTAAGTACCTGCTGCAAAGTTTGTGTAGATGCTGGAAATTCCAAATTGGAGTAATCCTGCCCTTTTAGGCTAGTAAGGAACAAGTTATGCAGTTGTGATAACGCTTATAATAGAGTGAGAACACAGGCACTGTGAGTGGAGCTGTAAAGGAGACAGCATGTCGAAGTAAGAAAATGATAAGAGCAGGTTTGTTGGAGAGAAGTAAAGTTGGGTAAGGTACAGAAGTGTGTGGCCAGAAAAGAGCAGTCTGGAAGGTGGGCAGAGGCCAAGGTCATCGAGGGAAAAAAGGGCCCCCTTTGGATGTAAGTGCTAAGCAATTGTCTCGTAAAATGAGTTTAATTTACTTTTTCAACTTTGAAAAAGAAATTGAGCTTTATAATATTAAATATAGGTAACACTGTTCCTGTAGTCTTTTAAAGACCAGTGCCATTACTACTCGATATAACAAGCTGATGGTCTTATGACGTTGAGTCTGCATAAGAGCAATTTCAGCCAAAGTGACAGAACAGAAGCTTCATAAAGCCAAGGAATGACAGTTGGTGACCTCACTAGTTGGCTACGTTATCAGAATGCAACTTATTGCAGTTTACGTGAGCCTGTTGAGTGATTTTAATATTATCTGCATTTAATTACATTATCTTCACAAAAGCATGAACAAGTGGCTTGAGAGATTTGCTCCAAAGAAATAGTAGATTAAAGATAAACTGTAACACTGCAAACAATAACAAAAAAAGTAGAACTGATCATTTCCCTCCTGGTAGGAACCTTAGTCACATTTCAAGGTAATTACATCTAGTCAAGGAGATCAGCCTAAAAATGAAGATTTCAAGGAAGACTATTTTGAAATAATGGAGTATCTTACACACTTATCATCGATAATTGAATTCACCTTAAGAATGTATTTACTTTGATTCATATAGTAGCTAATGATATTAATTGGACTTCATCTGGGTTATGTTTATATCTGGTATATATTATTTTTCTGTATCTCAGTCTTTCTTGGTTCTGATATCTATATATGTATTTATATATATATGCATTAATAAAATTCATTAGATTGAGGCCATATACTCAAATTTTTACTGATGTACATGCTGCTCCTGAAAAACTTTTAGCCACAGGTTGCTGCCAAAAGTGCTTTTAAATGGGGGAAAAATGTTTAGAAATGAACAGTGGCAGAGGAGTATAGGAAGCCTCAATACGAGTAAGGAAAGCATGTAGGAGGCTAGGACACCATAAGCTACAGTGAGACTGGATAGGATCAGTATGAAGCGGAGAAATATAGATAGAACAACGCCTAAAATGTTTGAGGCTTAAGCAGAGAAAGAAATGGAGGCGCTAACTCCTGGACTTCTGACTTAGAAGGTGGATAATATGAAACTGAAATGAACAGAGGGCAAGCTATTTTCTGGAGTGAAATAAGTTTAGTTTGGGGCAAGTTGAATTGAATTACCGGCGCTGAATCTTGGCTGAAAGTCAGTAGCCGGCATGTTAGTACTGTAATCAAGAGAAATGTCCAACTTAGATGAAAGATTACGAGATATCAGAGTAGAAGTGTAATTCGACCGTGGAGTGTGGATGAACATCATTGAGAGAGTAGGCCGGTGTCGTGGCTCATGCCTGTAATCCCAGCACTTGGCAGGCCGAGGCAGGCGGATCACGAGTCAGGAGATCAAGACCAACCTGGCTAACGGGTGAAACCCTGTCTTCTACAAATATACAAAAAATTAGCCGGGCGTTGTGGCGGGCGTTGTAGGCAGCTACTGGAGCTGACGGCAGCGAGAATGGCTATGAACCCAGAGGAGATTGCAGTGAGCCGAGATCACAAGCCCACTGCACTCCACCTGGCAAACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAACGCGAGGTAGTGCCAAATCTGAGAAGTAAATCAGGATGAATCCTGCAAAACCCCACATTTTTAGACCAGGTGAGGAAGAAGAATCTGGAAAGGAAGGCTCAGGAGTAAGAAACAATCTGGAGAAAATGTGCTGCATGGTAGTCAGACAGACAAGAATTTCGTGGAAGGTGGGTGATCAGCATCTTCAGAACAGATGCGAAGAAAGTTGAGAGCTAAAAAGTCATTTAGGTTTGATCATTAGCATTACAAGACCATGGAGTCCTCATAAGAGCAGTTCGCAAAGTGACAGAGCAGAAGCGCTGAGTAGACTATGCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCAGGCTGGAGTGCAGTGCCACGATGCTTGGCGTTCACTGCAACCTCTGCGTCTTGTCCCTCCCAAGTTAGCTGGCGACTACAGGTGTGTGCCACCACACCAGTGTTTCAATTTTTTGTATTTTAGTAAAGATGGGGTTTCACTATGTTGGCCAGATGGTCCTCATCTCTTGACCTCGTGATCCTGCCCGCCTCAGCTCCATGCGGGTTACAGGTTGGGACCACCATGCCTGGTCTAGACTATGCTTTTAAAGAAAGTTTCTCAGCAAGAATGAAAGAGAGCAAAGGCGCGGATATGTACACCTGTAATCACCACACTTTGGGAGGCTGTAAGTGGAGGATCACTTGAGGCCAGTAGTTCATACCAGCCTGCGCAACATGGCAAGACCCATCTTCCTACAGAAAATGCAA	20	PASS	ClusterIDs=HG4_PB_pbsv_16062:HG3_PB_SVrefine2PBcRDovetail_7793:HG3_PB_pbsv_15795:HG2_PB_SVrefine2PB10Xhap12_11686:HG2_PB_pbsv_16142:HG2_PB_SVrefine2Falcon1plusDovetail_4394:HG4_Ill_SVrefine2DISCOVARDovetail_11351:HG2_PB_SVrefine2Falcon2Bionano_7940:HG3_Ill_SVrefine2DISCOVARDovetail_11544:HG2_Ill_SVrefine2DISCOVARplusDovetail_4765:HG3_PB_SVrefine2Falcon1Dovetail_9964:HG4_PB_SVrefine2Falcon1Dovetail_9949:HG2_10X_SVrefine210Xhap12_11180:HG2_PB_SVrefine2PBcRplusDovetail_4022:HG4_PB_SVrefine2PBcRDovetail_8066:HG2_PB_PB10Xdip_12399;NumClusterSVs=16;ExactMatchIDs=HG2_PB_pbsv_16142;NumExactMatchSVs=1;ClusterMaxShiftDist=0.053634;ClusterMaxSizeDiff=0.053255;ClusterMaxEditDist=0.22952;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=5239;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2205;REFWIDENED=16:69225316-69215440;PctSeqSimilarity=0.9335;PctSizeSimilarity=0.9815;PctRecOverlap=0.9817;SizeDiff=97;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=2057.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:1:102:1/1:1:33:0:30:./.:1:0:6:5:0/1:9:12:1/1:3:379:.:4755:.
chr16	69395842	HG4_PB_pbsv_16064	G	GCCTCCTTTTTTGTTTTTTTTTTTTTTTTTTTTTTGAGAGCGGAGTCTTCGCTCTGTCTCCCAGGCTGGAGTGCAAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTTCTGCCGGTTCACGCCATTCTCACGTGCCTCAGCCTCCCAAGTACTGGGCCACAGGCGCCGCTCACTACGCCCGGGCCTAATCTTTTGTATGTTTTAGTAGAACGGGGTTTCACGTTTTTTAGCTCGGGATGGGTCTCGATCTCCTGACCTCGTCATCCGCCCTCGGCCTCCAAAAGTGCTGGTGATTACAGGCGTGAGCCACCGCGGCCGTCGGCTCCACTA	10	PASS	ClusterIDs=HG2_PB_HySA_29477:HG4_PB_pbsv_16064:HG4_PB_HySA_23563:HG2_PB_pbsv_16144:HG2_PB_SVrefine2Falcon1plusDovetail_4396:HG4_PB_SVrefine2Falcon1Dovetail_9950;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_16064;NumExactMatchSVs=1;ClusterMaxShiftDist=0.101644;ClusterMaxSizeDiff=0.0926756;ClusterMaxEditDist=0.228404;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=332;DistBack=-6;DistForward=7165;DistMin=-6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=16:69395835-69395846;PctSeqSimilarity=0.9439;PctSizeSimilarity=0.9849;PctRecOverlap=0.967;SizeDiff=5;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=96;MatchId=2058.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:0|1:23:2:0:16:./.:25:0:1:12:0/1:16:3:0/1:8:8:.:.:.
chr16	69772313	HG2_Ill_SVrefine2DISCOVARplusDovetail_4770	C	CTTGCTCTGTCGCCCAGGCTGGAGTGCATTGGCACCATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGTCTCAGCCTCCTGAG	20	PASS	ClusterIDs=HG2_PB_pbsv_16147:HG3_PB_assemblyticsfalcon_9879:HG3_PB_pbsv_15797:HG3_PB_assemblyticsfalcon_9878:HG4_PB_pbsv_16067:HG2_PB_PB10Xdip_12402:HG2_Ill_breakscan11_4684:HG4_PB_SVrefine2PBcRDovetail_8071:HG4_PB_SVrefine2Falcon1Dovetail_9953:HG4_Ill_manta_3742:HG4_Ill_SVrefine2DISCOVARDovetail_11358:HG4_Ill_Krunchall_22160:HG4_Ill_GATKHCSBGrefine_11013:HG4_Ill_250bpfermikitraw_21154:HG4_Ill_150bpfermikitraw_20378:HG3_PB_SVrefine2Falcon1Dovetail_9967:HG3_Ill_Spiral_16645:HG3_Ill_SVrefine2DISCOVARDovetail_11546:HG3_Ill_Krunchall_21418:HG3_Ill_GATKHCSBGrefine_10585:HG3_Ill_250bpfermikitraw_20873:HG3_Ill_150bpfermikitraw_20309:HG2_PB_SVrefine2PBcRplusDovetail_4025:HG2_PB_SVrefine2PB10Xhap12_11689:HG2_PB_SVrefine2Falcon2Bionano_7943:HG2_PB_SVrefine2Falcon1plusDovetail_4399:HG2_Ill_manta_4411:HG2_Ill_SVrefine2DISCOVARplusDovetail_4770:HG2_Ill_Krunchall_21829:HG2_Ill_GATKHC_25720:HG2_Ill_GATKHCSBGrefine_10651:HG2_Ill_250bpfermikitraw_21491:HG2_Ill_150bpfermikitraw_20264:HG2_10X_SVrefine210Xhap12_11185:HG4_PB_HySA_23571:HG3_PB_HySA_24452:HG2_PB_HySA_29484;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11185:HG2_Ill_150bpfermikitraw_20264:HG2_Ill_250bpfermikitraw_21491:HG2_Ill_GATKHCSBGrefine_10651:HG2_Ill_GATKHC_25720:HG2_Ill_Krunchall_21829:HG2_Ill_SVrefine2DISCOVARplusDovetail_4770:HG2_Ill_manta_4411:HG2_PB_SVrefine2Falcon1plusDovetail_4399:HG2_PB_SVrefine2Falcon2Bionano_7943:HG2_PB_SVrefine2PB10Xhap12_11689:HG2_PB_SVrefine2PBcRplusDovetail_4025:HG3_Ill_150bpfermikitraw_20309:HG3_Ill_250bpfermikitraw_20873:HG3_Ill_GATKHCSBGrefine_10585:HG3_Ill_Krunchall_21418:HG3_Ill_SVrefine2DISCOVARDovetail_11546:HG3_Ill_Spiral_16645:HG3_PB_SVrefine2Falcon1Dovetail_9967:HG4_Ill_150bpfermikitraw_20378:HG4_Ill_250bpfermikitraw_21154:HG4_Ill_GATKHCSBGrefine_11013:HG4_Ill_Krunchall_22160:HG4_Ill_SVrefine2DISCOVARDovetail_11358:HG4_Ill_manta_3742:HG4_PB_SVrefine2Falcon1Dovetail_9953:HG4_PB_SVrefine2PBcRDovetail_8071;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0784314;ClusterMaxSizeDiff=0.0784314;ClusterMaxEditDist=0.240385;PBcalls=16;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=99;DistBack=9415;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=16:69772314-69772314;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2059.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:2:14:1:9:./.:0:4:0:5:1/1:0:26:./.:.:.:.:.:.
chr16	71325251	HG3_Ill_SVrefine2DISCOVARDovetail_11561	TTAGA	CTATTCAAAAGACACCATTCAGAGTGAAAAGGCAACCTACAGAGTGGGAGAAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTAAATATATATATACAGTAGAAAAATGGACAGAGGCTGGCTGTGGTGGCTCACGCCTGTAATCCCAGCACTTCGGGAGGCCGAGGTGAGCAGATCACTTGAGGTCAGGAGTTAGAGACCAGCCTGGACAACATGGCGAAACCCCATCTCTACTAAAAATATTTTTAAAAATTAGCCGGGCCTGGTGGTGGGCACCTATAAACCCAGCTACTCTGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAGGCAGAGGTTGCAGTCAGCCAAGATCGCACCACTGCACTCCAGCCTAGATGACAGAGTGAGACTCTGTCTCAAAAAAAAAAACAACAACAGCAACAAAAAAAAAAAAAAAAGAAAAATGGACAGACACTTCAAAAAGATATATCCAAAAGGCCTATAAACATATGAAAACGTGTTAAACCTCATTAGTCTTTGGGAAAATGCAAACCAAAACCACAATAAGATACCATTACACACCCACCAGAATGGCTAAAATGAAAAAGACTGAAAACGTGTTAGGGAAGATGGAGAGAAACCACTGAAAAACTGTTTGAAAGAAAATGATCTTCCAGACTCACTGGTTGGTTGCCTTTTCTTCTTCTTTTTTTTTTTTTTTTTATATATTTCAGTTTTTTGAGGTGTACATATATACAGTGAAATGCTCAGATCATAAGTGTTCTATTCAACTACTTTTGACAAATGCCTATTAAATATTCCAGAAAGTACCCTTGTGCTCCATCCCAATCCATCTCCCACCTTCAAGAAGCACCCACCCATCTGTTTTCTGTCGCCATAGTTTAGTTCTACCTATTCCAGAATTTTATATAAGTTCAATCATTACAGCTTATGCCTTTTTGTTTCCAGCCCCTTTAGATTCAGTTAAATATTTATCCATGCTGTTGTATGTGTCTAGTATTTCCCTTAACATATAAAACAGAGCTCTGAGTGAGCATTGAGTGAACAGCATCGGACTTGGTGGAGACAAGAGGAATGTTCTTTTTTATTATTATTATACTTTAAGTTCTAGGGTACATGTGCACAACATGCCAGTTTGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTTGTCATTTGCATTAGGTATATCTCCCAAGGTTATCCCTCCCCCCTCCCCCCACCCCACAACAGGCTCCAGTGTGTGATGTTCCCCATCCTGTGTCCAAGTGTTCTCATTGTTCAGTTCCCACCTATGAGTGAGAACATGCAGTGTTTGGTTTTCTATCCTTGCGATAGTTTGCTCAGAATGATGGTTTCTGGAATGTTCTTGTAGTTTATATGTTTGATCTGTTTGTCTGATTCAGTGGAACACCACACAGCATTGGTATTGACTATTATACAATCTTAAATTGTTCCTATTCTTTGTCACTTGGTGTTCCATTTAGTCTCTTCTTGCTGCATGGAATGGACCACTGGTTAAAGGCAGCAAAGACAGTGCTCCTAAGGGAACACTAATGTTGAAATCCAGAAGTTGATAAGAATTTTGAACCTGATAATTCTTTCACTTTTTCTTAAGAGCTTCATTAGATCTCTTTCCTTCTTCCTTTTTCTTTTCTTTCTCTTCTTTCTCTTTCTTTCTTTTTCTTTTCTTTCTTCTTTCTTTCTTCCTTTTTCTTTCTTCCTTTCTTTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCTTGAGACAGGGTCTTGCTCTGTTGCCCAGGCTAGAGTGCAGTGGCACCACCATAGCTCACTGCCACGTCAAACTCCTGGGCTCAAGGGATGGTCTCGCTTGGGCCTCCCAAAGTGCTGAGATTCCAGGCATGAGCCACCGCACCCAGCCCTTCACTAGATCTTTGTATAGCATTCTGATCGAAATTTTCACACAACACTTATGCTATCAAAACACAATGTTAAGAGAAAATATAGTAAAAACTATAACCAATTCGTGTGTTATACTATTGGGTAGAACATCTACATTGTGGTATTTGTGGGAAAGTGCTTGTAAGCAGCAGCCTGAATCTTTTTTCTTAGTATTTAGAAGCAAAAGTTATGAAAACAAATTAATTGATCTGTAAGGATAAATACAAGAATTCTAAACATCAGGTCAGGAAAGCAGTTTTTGTCTACTTTTAATGCTGTAACACACAATTAAACTTCACTTTGCACATTATACATTCAGTACTAAAATTCAATGTGAAATGTCTTTCTTAAAATTTATTTCTCAGTAATTCATGTTTTTCTTTCTCACATAGTGAATTTCAAGTTAACTAAACAGTGTGAGTCACTAAGTTGGGGAAAACTCAAAGTGTATTTTATATGTTATAAATATCATTAAAAATTATGTTTGGGAGTGCGCGCGGGCGCGTGCGGGAGGGGGCGGGTGGGGAAGGATCGCAGGCGAGATTACGAGGCAGGCGAGGCTCGCGCGCCCGCCCCCGCCCTGGCCCCCAGTGCCCACCCGGTCGGCCCGGCACAGCCATGATCAAGGCGATCCTAATCTTCAACAACCACGGGAAGCCGCGGCTCTCCAAGTTCTACCAGCCCTACAGTGAAGATACACAACAGCAAATCATCAGGGAGACTTTCCATTTGGTATCTGAGATGAAAATGTTTGTAATTTCCTAGAAGGAGGATTATTAATTGGAGGATCTGACAACAAACTGATTTATAGACATTATGCAACGTTATATTTTGTCTTCTGTGTGGATTCTTCAGAAAGTGAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACATTAGACAAATGTTTTGAAAATGTCTGTGAGCTGGATTTGATTTTCCATGTAGACAAGGTTCACAATATTCTTGCAGAAATGGTGATGGGGGGAATGGTATTGGAGACAAATATGAATGAGATTGTTACACAAATTGATGCACAAAATAAGCTGGAAAAATCTGAGGCTGGCTTAGCAGGAGCTCTAGCCCGTGCTGTATCAGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATATTAACATTGGTGACATCAGTATAAAAGTGCCAAACCTGCCCTCTTTTAAATAAAAATGTAAAAAGGCCACTCCCAGGTAAAATCCAGGGGGAAGAGTCATCTAAGTTTACCATGCAGTTGTTTACCAAAAATAGAGAAGGAGAGTCTTAACTTTTGCTCTTGGATTTAAGTCAAGGTACTGTATAGAAGTTGTGTAAAATCAGTATGAAAGTTCAATGTTGCTGTTCTTGCTCAGTGATTTTAAAGAAATTGAGTAGTTCCTATGTGATTTTTTTTTCTTTTCTAAACTGCATTCCTGTGCCCACCTACGGCATGCCTCTATGTATTGGCTACTACAGTGTTTTAAAAAGTGTTTCAGATATTTCTCTAATTATGTACAACCTAAAATGTTGGTGTTTTGTATGGATCACAAGTGCAGCATTCCTTAATTCCTTCTGCTATATGTCACACAATTGTTATTTAAAGAACCAAGTATGTATTGCATGAAAACATTATGACCTTTTTCTCTTATTTAAATAAACTCCAAGGTAACTGGACTTCTAAAAAAAAAAAGATTATGTTTAAGATTAATCTTAAAATAAGATTTATAATAGAGTCATTAATAATATGCTGACCCAAAATACATTTTTACTTAAAATAGTTTTTTATGGACTGAATTGTGCCCCCCCAACCAGATGCTTCTGTTGAAGTTCTAACTCCTGAATGGATTTGGAGCTAGGGCCTTAAAGGAGGTAATTAAGGTTACAAAGATTCTAAGGGTGGCGCCCTAACCTGATAGGACTGATGCCTTTATAAAAAGAGGAGCAGACACCAGAAATCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCCACACACACACACCGAGGAAAGGCCATGTGAGGACACAGCAAGAAGACAGCTGTCTGCAAGCCAGGAAGAGAAGCCTCACTAGAAACCAGCCCTGCCAGCACTTTGATCTTTGATCTTGGACTTATAGCCCCTAGAACTGTGAGAAAATAAACTTCTGTTGTTTAAGTCGCTGTGTCTTGTGATATTTTGTTATGGCAGCCAAGGTAGACTAATACACACTTCTTTATTTTCTTTCATGCAAAAATGACCAATAGATTTTTGAAGAAAAAATTGTTAAGAGTTTAATAGAGAATGTATATTGCACCTAATGTAGATAACAGGTTGATGGGTGCAGCAAACCACCGTGGCACATATATACCTATGTAACAAACCTGCATATTCTGCTTTATGTATCTCAAAACATAAAGTATAGTAATAATAATAAAAAGAACAGAAAAAAAGAGAGAGAATGTGTATTGCTATGAGATGGGCTCAGACATTTAAAAATATTGGGAAACACTGATACGTGGAAGAAGAATGCAATATATGGCCCTCCCTTGAAGAGTTTATCATTTCATTGCAGACACAAGATGTTTAAAAATAAATAGCATTTTTAAAAAATAATGAAAGCATGGGCACCAGGCGCGGTGGCTCACGCCTGTAATTCCAGCACTTTAGGAGACTGAGGCAGGAGATCACAAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGTGAAACCCGGTATCTACTAAAAATACAAAAAAATTAGCCAGGTGTGGTGGCGGGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9956:HG4_PB_pbsv_16072:HG3_PB_HySA_24468:HG2_PB_HySA_29495:HG4_PB_HySA_23579:HG2_PB_SVrefine2Falcon1plusDovetail_4405:HG2_PB_SVrefine2PB10Xhap12_11695:HG4_Ill_SVrefine2DISCOVARDovetail_11363:HG3_Ill_SVrefine2DISCOVARDovetail_11561:HG2_PB_SVrefine2PBcRplusDovetail_4029:HG2_Ill_SVrefine2DISCOVARplusDovetail_4776:HG2_10X_SVrefine210Xhap12_11190:HG3_PB_SVrefine2PBcRDovetail_7797:HG4_PB_SVrefine2PBcRDovetail_8072:HG3_PB_SVrefine2Falcon1Dovetail_9974;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11190:HG2_Ill_SVrefine2DISCOVARplusDovetail_4776:HG2_PB_SVrefine2PBcRplusDovetail_4029:HG3_Ill_SVrefine2DISCOVARDovetail_11561:HG4_Ill_SVrefine2DISCOVARDovetail_11363;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0866214;ClusterMaxSizeDiff=0.0858099;ClusterMaxEditDist=0.146465;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=4755;DistBack=3;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=16:71325256-71325250;PctSeqSimilarity=0.9998;PctSizeSimilarity=1;PctRecOverlap=0.9992;SizeDiff=0;StartDistance=-2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2060.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:55:0|1:30:0:0:40:./.:31:0:0:4:0/1:14:32:0/1:160:290:.:4734:.
chr16	71418356	HG2_PB_SVrefine2Falcon1plusDovetail_4406	G	GCACCACACACAACACACTACACACACCCACACACACACACACACACACAAAACACACCACACACACAACACACACAGATCACACACACAAAACACACACAGACCACACACACCACATACACAACACACGCAGACCACACACACTACATATCACACGCACACACCCCACATACACAGAGACATCACACACACCACACAGACCACACACCACACACACAACACACATCACACATGCACACACCACACACATACACAGATCACACACACCAAAGACCACACACCACACACACATCACACACACACCACACACACAGACCATATACCACACAGACCACACACCACACACGTATACAGACACCTCACGCACACACCACACAGACACCACACACCACACACACATACCACACACACACCACACACAGACCACACACCACACACACACCACATACACACCACACACCACACACACAACACACACCCACACACACACCACATACACAGACCATGTACCACACATACACAACACACAGACCACACAACAGACCACACAACACACACACACATCACACACACCACACACATACACAAACACCTCACGCACACACCACAGAGACCACACACCACATACACACCACACACATTACAAACACACATACCACACAACACACACAAACACCCTACACACAACACACACACAATGCACACCACATACACACATCACATACACACAGGACACACACACCATGACACACACCCTACACCCACACACAACACATACACACAGACCACACAACACACACACAACAAATACCACACACAGACCACACCACACACATCACACACACATCATACACACATCACACACACATCATACACACCCACACACCACACATCATACATACCACTCACCACACATACCACACACAGAACACACAACACACAACACACCACACACACCGCACACACACACCACACATATGCACACCACACATCACACATACCACACACATATGACACACACAAACACACATGCCACACACACCACACATGCCCACACACCAAATACCACACGCAGACCACACCACACACATCACACACACACCACACATCACACACACACCACACGTCACACATATCACACACACCACACATACACACAACGCATAACCACACACACACCACACTACACACACATCACACCACACCAAACACATACCACCCCACACACACCATACCACACACACCACACATATACACAACACACAACACATATAACCCTACACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4406:HG2_PB_pbsv_16150:HG4_PB_pbsv_16073:HG3_PB_pbsv_15806:HG4_PB_HySA_23583:HG2_PB_HySA_29496:HG4_Ill_MetaSV_1887:HG2_Ill_MetaSV_1827:HG3_PB_SVrefine2Falcon1Dovetail_9975:HG2_PB_SVrefine2PBcRplusDovetail_4030:HG3_Ill_SVrefine2DISCOVARDovetail_11562:HG2_PB_SVrefine2PB10Xhap12_11696:HG2_PB_SVrefine2Falcon2Bionano_7944:HG4_PB_SVrefine2PBcRDovetail_8073:HG4_Ill_SVrefine2DISCOVARDovetail_11364:HG3_Ill_GATKHCSBGrefine_10591:HG3_PB_HySA_24471:HG4_PB_HySA_23582:HG4_PB_SVrefine2Falcon1Dovetail_9957:HG3_PB_SVrefine2PBcRDovetail_7798;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4406;NumExactMatchSVs=1;ClusterMaxShiftDist=0.292125;ClusterMaxSizeDiff=0.291279;ClusterMaxEditDist=0.309907;PBcalls=15;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=1283;DistBack=2269;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=289;REFWIDENED=16:71418357-71418645;PctSeqSimilarity=0.9785;PctSizeSimilarity=0.9984;PctRecOverlap=0.8405;SizeDiff=-2;StartDistance=-204;EndDistance=-204;GTMatch=1;TruScore=93;MatchId=2061.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:1/1:1:14:0:26:./.:65:32:50:29:0/1:15:8:./.:17:259:.:1222:.
chr16	71767413	HG3_PB_SVrefine2PBcRDovetail_7800	G	GGCTCACCGCAACCCCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCAGAGAAGCCGGGGTTGCAGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_12413:HG3_PB_pbsv_15808:HG2_PB_pbsv_16151:HG2_Ill_svaba_20073:HG2_PB_HySA_29501:HG4_PB_pbsv_16075:HG4_PB_assemblyticsfalcon_9723:HG4_Ill_svaba_20046:HG4_Ill_scalpel_14821:HG4_Ill_SVrefine2DISCOVARDovetail_11366:HG4_Ill_Krunchall_22168:HG4_Ill_GATKHC_25677:HG4_Ill_GATKHCSBGrefine_11017:HG4_Ill_250bpfermikitraw_21162:HG4_Ill_150bpfermikitraw_20385:HG3_PB_SVrefine2PBcRDovetail_7800:HG3_PB_SVrefine2Falcon1Dovetail_9976:HG3_Ill_svaba_20245:HG3_Ill_manta_3596:HG3_Ill_Spiral_16662:HG3_Ill_SVrefine2DISCOVARDovetail_11564:HG3_Ill_Krunchall_21428:HG3_Ill_GATKHC_25580:HG3_Ill_GATKHCSBGrefine_10593:HG3_Ill_250bpfermikitraw_20883:HG3_Ill_150bpfermikitraw_20319:HG2_PB_SVrefine2PBcRplusDovetail_4031:HG2_PB_SVrefine2PB10Xhap12_11697:HG2_PB_SVrefine2Falcon2Bionano_7945:HG2_PB_SVrefine2Falcon1plusDovetail_4407:HG2_Ill_manta_4413:HG2_Ill_SVrefine2DISCOVARplusDovetail_4780:HG2_Ill_Krunchall_21837:HG2_Ill_GATKHC_25729:HG2_Ill_GATKHCSBGrefine_10655:HG2_Ill_250bpfermikitraw_21497:HG2_Ill_150bpfermikitraw_20271:HG2_10X_SVrefine210Xhap12_11195;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11195:HG2_Ill_150bpfermikitraw_20271:HG2_Ill_250bpfermikitraw_21497:HG2_Ill_GATKHCSBGrefine_10655:HG2_Ill_GATKHC_25729:HG2_Ill_Krunchall_21837:HG2_Ill_SVrefine2DISCOVARplusDovetail_4780:HG2_Ill_manta_4413:HG2_PB_SVrefine2Falcon1plusDovetail_4407:HG2_PB_SVrefine2Falcon2Bionano_7945:HG2_PB_SVrefine2PB10Xhap12_11697:HG2_PB_SVrefine2PBcRplusDovetail_4031:HG3_Ill_150bpfermikitraw_20319:HG3_Ill_250bpfermikitraw_20883:HG3_Ill_GATKHCSBGrefine_10593:HG3_Ill_GATKHC_25580:HG3_Ill_Krunchall_21428:HG3_Ill_SVrefine2DISCOVARDovetail_11564:HG3_Ill_Spiral_16662:HG3_Ill_manta_3596:HG3_Ill_svaba_20245:HG3_PB_SVrefine2Falcon1Dovetail_9976:HG3_PB_SVrefine2PBcRDovetail_7800:HG4_Ill_150bpfermikitraw_20385:HG4_Ill_250bpfermikitraw_21162:HG4_Ill_GATKHCSBGrefine_11017:HG4_Ill_GATKHC_25677:HG4_Ill_Krunchall_22168:HG4_Ill_SVrefine2DISCOVARDovetail_11366:HG4_Ill_scalpel_14821:HG4_Ill_svaba_20046:HG4_PB_assemblyticsfalcon_9723;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0774194;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.219355;PBcalls=12;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=75;DistBack=13507;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=16:71767414-71767422;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2062.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:71:1/1:1:32:1:36:./.:2:11:1:16:1/1:0:57:./.:.:.:.:.:.
chr16	72140344	HG2_Ill_GATKHCSBGrefine_10656	T	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTGTTCTGTTCTGTTCTGTTCTGTTCTG	20	PASS	ClusterIDs=HG4_Ill_MetaSV_1889:HG2_PB_pbsv_16153:HG2_PB_assemblyticsfalcon_9932:HG4_Ill_GATKHCSBGrefine_11018:HG2_Ill_GATKHCSBGrefine_10656:HG2_PB_SVrefine2Falcon1plusDovetail_4409:HG2_PB_SVrefine2Falcon2Bionano_7947;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10656:HG4_Ill_GATKHCSBGrefine_11018;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0491228;ClusterMaxSizeDiff=0.0210526;ClusterMaxEditDist=0.133333;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=143;DistBack=4;DistForward=9;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=16:72140341-72140358;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2063.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:21:1|0:3:19:23:0:./.:1:17:18:3:0/1:21:20:./.:.:.:.:.:.
chr16	72729242	HG2_PB_SVrefine2Falcon2Bionano_7948	TAGT	CTTAATTCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGACAGTTTGTTACAATTTCTGTTCTTTTACATTTGCTGAGGAGTGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAGAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGCGTTCAATTCCTGTATATCCTTGTTAACGTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTATTGTGTGGGAGTCTAAGTCTCTCTGTAGGTCTCTAAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGAGTGCATCTATATTTAGGATAGTTAGCTCTTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCGCCTTTGTCTCTTTTGATCTTTGTTGATTTATAGTTTGTTTTATCAGAGACTAGGATAGGAACCCTTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATGTTCCTCCATCCCTTTATTTTGAGCCTATGTGTGTCTCTGCACATGAGATGGGTTTCCTGAATACAGCACACTGATGGATGGGTCTTGACTCTTTATCCAGTTTGCCAGTCTGTGTCTTTTAACTGGAGCATGTAGCCCATTTACATTTAAGGTTAATATTATTATGTGTGAATTTGATTCTGTCATTATGATATTAGCTGGTTGTTTTGCTCGTTAGTTGATGCAGTTTCTTCCTAGCCTCGATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCGGTTGTTCCTTTCCATGTGTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTAGTGGTGACAAAATCTGTCCGCATTTGCTTGTCTGTAAAGGATTTTATTTCTCCTTCATTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTGGAATGTTGAATATTGGCCCCCAGTCTCTTCTGGCTTATAGAGTTTCTGTTGAGAGATCAGCTGTTAGTCTGATGGGCTTCCCTTTGTGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGAGAATTATGTTTCTTGGAGTTCCTCTTCTTGAGGAGTATCTTTGTGGCGTTCTCTGTATTCCCTGAATTTGAATGTTGGCCTGCCTTGCTAGATTGCGGAAGTTCTGCTGGATAATATCGTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCCTGTCACTTTCAGGTACACCAATCAAATGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGTTCATTTCTTTTTATTCGTTTTTCTCTAAAGTTCTCTTCTTGATTCATTTCATTCATTTGATCTTCCATCACTGATACCCTTTCTTCCAGTTGATCGAATCAGCTACTGAGGCTTGTGCATTCGTCATGTAGTTCTCGTGCCGTGGTTTTCAGCTCTATCAGGTTCTTTAAGGACTTCTCTGCATCGGTTATTCTAGTTAGCCGTTTGTCTAATTTTTTTTCAAGGTTTTTAACTTCTTTGCCATGGGTTCGAACTTCCTCCTTTAGCTCG	20	PASS	ClusterIDs=HG3_PB_pbsv_15811:HG2_PB_HySA_29512:HG4_PB_assemblyticsfalcon_9732:HG4_PB_SVrefine2Falcon1Dovetail_9960:HG2_PB_assemblyticsfalcon_9935:HG2_PB_SVrefine2Falcon1plusDovetail_4410:HG3_PB_SVrefine2PBcRDovetail_7802:HG4_Ill_SVrefine2DISCOVARDovetail_11370:HG2_PB_SVrefine2PBcRplusDovetail_4033:HG2_PB_SVrefine2Falcon2Bionano_7948:HG2_Ill_SVrefine2DISCOVARplusDovetail_4784:HG2_PB_SVrefine2PB10Xhap12_11700:HG3_PB_SVrefine2Falcon1Dovetail_9979:HG3_Ill_SVrefine2DISCOVARDovetail_11568:HG2_10X_SVrefine210Xhap12_11197:HG4_PB_pbsv_16077:HG2_PB_pbsv_16154;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4784:HG2_PB_SVrefine2Falcon2Bionano_7948:HG2_PB_SVrefine2PBcRplusDovetail_4033:HG4_Ill_SVrefine2DISCOVARDovetail_11370;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0550569;ClusterMaxSizeDiff=0.0520646;ClusterMaxEditDist=0.185825;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=1634;DistBack=-4;DistForward=24046;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=16:72729246-72729241;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9982;PctRecOverlap=0.9951;SizeDiff=3;StartDistance=3;EndDistance=6;GTMatch=0;TruScore=99;MatchId=2064.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:75:1/1:0:6:0:14:./.:0:0:0:1:1/1:0:16:1/1:15:325:.:1661:.
chr16	74845006	HG2_PB_PB10Xdip_12431	T	TAAAAATGACTTTCCTGGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCAGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCCCCCATCGTCTGGGATATGAGGAGCCTCTCTGCCTGGCTGCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAACCCTGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCTGTCTGAGAAGCGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAGCCACCCCGTCTGGGAAATGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGACTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGTGGGGCGCCTCTGCCCGGCCGCCCCTACTAGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCAGGAGGGGGGTGGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCTATCCGGGAGGGGGGTGGAGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCAGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGAGGGGGGGTCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGAGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGTCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGATGGTGGGGGGGGTCAGCCCCCCACCCGGCCAGCTGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAAAAAAAAAAAAAGAAAATAACATTCGTAACTTTGAGGAAACAGAATAAATAGGAGATTTATTAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9964:HG4_PB_pbsv_16084:HG2_PB_pbsv_16163:HG3_PB_HySA_24503:HG4_PB_assemblyticsfalcon_9752:HG2_PB_assemblyticsfalcon_9953:HG3_PB_HySA_24502:HG2_PB_HySA_29541:HG2_Ill_breakscan11_4687:HG3_PB_SVrefine2PBcRDovetail_7807:HG2_PB_SVrefine2Falcon1plusDovetail_4415:HG4_PB_SVrefine2PBcRDovetail_8079:HG2_PB_SVrefine2PBcRplusDovetail_4038:HG2_PB_SVrefine2PB10Xhap12_11706:HG2_PB_SVrefine2Falcon2Bionano_7952:HG2_PB_PB10Xdip_12431:HG4_PB_HySA_23612:HG3_PB_pbsv_15818;NumClusterSVs=18;ExactMatchIDs=HG2_PB_PB10Xdip_12431;NumExactMatchSVs=1;ClusterMaxShiftDist=0.1496;ClusterMaxSizeDiff=0.14922;ClusterMaxEditDist=0.212881;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=2694;DistBack=16437;DistForward=26726;DistMin=16437;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=16:74845007-74845022;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9993;PctRecOverlap=0.9993;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=2065.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:92:./.:9:23:0:30:1/1:0:6:0:8:1/1:0:25:1/1:8:446:.:2703:.
chr16	75503315	HG2_PB_PB10Xdip_12594	C	CAAAAAAAAAAAAAAAAAAAAGCTCCTCTCCCTCTCCCTCCTCTCCCTCTCCCTCCTCTCCCTCTCCCTCTCCCTCTCCCTACGGTCTCCCTCTCCCTCTCTTTCCACGGTCTCCCCCTGATGCCGAGCCAAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTATTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATGGCAGACGGAGTCGTGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTCCACTTCCCAGCTGCCTGCCTTGGCCCCGCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCTCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCAGGCCGCCCATCTTCTGCGATGTGGGGAGCGCCTCTGCCCTGCCGCCCCGTCTGGGATGTGAGGAGCGTCTCTGCCCGGCTGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCAGCAGCCACACCCTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCACTCCGTCTGGGAAGTGAGGAGCGTCTCCGCCTGGCAGCCACCCCGTCTGGGAGGGAGGTGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCAGAAGGGAGGTGGGGGGGTTAGCCCCCCGCCCGGCCAGCCGCCCCATCCAGGAGGGAGGTGGGGGGGTCATCCCTCTGCCCGGCCAGCTGCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCAGGAAGGATGTGGGGGGGTCAGCCCCGGGCCCGGCCAGCCGCCACATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGAGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGAGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGCGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCTGGCCGCCCCTACTGGGACGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCATCCGGGAGGGAGGCGGGGAGGTCAGCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGGAGGCGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTACTCAACAGCTCATTGAGAACGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGGGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCATGTCTGTGTAGAAAGAGGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTATGTCCACTCAGGGTTGAATGGATTAAGGGTGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCATTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAACACTGCGGAAGGCTGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTATCTGCTGACCTTCCCTCCACTATTGTCCTGTGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAGAAAAAAAATGGATTACCCTGTGCACAGTAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4040:HG4_PB_pbsv_16089:HG3_PB_HySA_24513:HG2_PB_pbsv_16167:HG3_PB_pbsv_15822:HG2_PB_HySA_29553:HG2_PB_assemblyticsfalcon_9963:HG4_PB_assemblyticsfalcon_9762:HG3_PB_HySA_24512:HG2_PB_SVrefine2Falcon1plusDovetail_4416:HG2_PB_PB10Xdip_12594:HG3_PB_SVrefine2Falcon1Dovetail_9982:HG4_PB_SVrefine2Falcon1Dovetail_9966:HG3_PB_SVrefine2PBcRDovetail_7809:HG2_PB_SVrefine2PB10Xhap12_11709:HG2_PB_SVrefine2Falcon2Bionano_7954:HG4_PB_SVrefine2PBcRDovetail_8080;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_12594;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0669257;ClusterMaxSizeDiff=0.0669257;ClusterMaxEditDist=0.163514;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=2291;DistBack=41233;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=16:75503316-75503335;PctSeqSimilarity=0.9978;PctSizeSimilarity=0.9957;PctRecOverlap=0.9957;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2066.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:23:0:7:./.:0:1:0:1:1/1:0:10:1/1:11:403:.:.:.
chr16	76056638	HG2_PB_SVrefine2PB10Xhap12_11710	T	TATTTTATTTTATTTATTTATTTTTTGAGACGGAGTCTCGCTCTGTCAGCAGGCTGGAGTGCAGTAGTGTGATCTCGGCTCACTGCAACCTCCGCCTCCCTGGTTCAAGCTATTCTCCTGCCTAAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCCTGTTGGCCAGGTTGGTCTCGATCTCCTGACCTTGTGATCCATCCGCCTCAGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACTGCACTCAGCCAAAAATTTATTCTTGCTCACACATGATCCTGGTCCTATATTCTTGAAGATTAGACATGGGTTTCAGGTAAGAGTGATGCTAAGATTTCATAACGGCTGTACCCTGATGCAATACCCCAACCTTAGGCCCAATAGCCTGAGATATACTGTTAGGAGATATATTCTCTTGGAGAATACATCTCAGGCTATTGGGCAATGAAGGGAAAGTAAGCATTAGGTTGTGATCCAGTTTGCTCTGTGCACAAAAGAGTCCCGGTCCTATCTTCTGGAAGTTGAGACATGGGTTTCAGGTAGACAGTGATGCAAAGTTTTATAATGGCTATATCCTGATGCCATACCGAATGTGTTCCCTGTGACTCGCTCAAGCCCATAATGAAAACCAGACTATTGATTTTAGCAGGTAATCCACTGGCAAATGTTATCTCTGAATTCATATTTAAGCTGGAATTCTCAGGATTTTCTACTAGCAATGACATTTTTAAAATATTGGCTTTATATCCTGATTCACCTCTTTATTCAGAGTCCTATATACCTCTGGAGAACTTGCTCTCACTCCCTTTAACACGTGTTTGCATAATGCAAACTAAAGATGGATTTCCTAAATGCATATGGATGAGTAAACACTTCGGCTTGTATAAATCTTGAAACATAAATCTGACAAACACATGAGGACCAGCCTTATCTACTTGGGTGCCCCCTTTGAAATTCCTAGTGACTGGGGTAAGAAGCACTCCTTTCTCAGGAAAGGAAACCTTGACACATGGGTAGCTGTTTAATAATAAATGTATTTTATTACTCAGATTTTACAATTTATTTTTATTTGTATCACACAGTACAGCTGTGGAAAAGCTGTATGGCACCCTGGAAAAAAGGGCTTCTTTAAATAGAAGGACCAAAGGGATAATAGGAAAAATAAGGCAGATTAATACAAGAGGAATGAGGTTTTGGATTCATTATCTAAAAATAATGGGGTAGGTGTAAAGAGTTCTGAGTTTTAATTCCAAAGTATCAGAACAAATTAAATCCTAGAAGAAGAATATCGAGGTACCCTATGAGGTAAGTGATCATTAAATAGGTATAATATAACCCCCCTTCCATTTATCCCATTTCCAAAGAGTGTGCATCTGCCTTTGCTAAGAATCAGGCATATGTACACTCTGACAGCGAGAGAGACAGTAGAGAACCACTATATTCTCTCATTAAAATGAACTCTAGATATTTCATAAAACCCCTCAGGTTTAATTTCTCCTAAGAATATATCTCAGACTATTATGGAGTGAATGGAAGTAAGCATTAGGCTACCCAGGTTGGGGTCCAATTTACTTTTTGCACAAACTTTCAAACAAGTCTCTATTTTCTTGTGAAGGCTACCCCTGCCATATTTGGAGCCTCTCTCTGCTCAGCCTCTTGGGGATCTGCAAAATCAACTGCTATAGTGAACGTCTTTTCCTGACTGTTATGCCGTCAGATCTTTGTTATTGTAGTTGTTCAAATATGTGCATTTCTTTTCTCCCAGTCAGATCTTTTTTAATGAGTCATTTTACTGGAAGCATGTACCATCTTTCTCTACTCTCCCAAGTTTAAGGACATTTTTAAAGACAGTCATCAGAGTAAAGTTGCAGAAGTTCTAGAGTTGTTTCCTATTTTCCTCATGATATTAACTAGTCTGTTGGGAGCAAGCCTGACCCTCATGAGCACTGTGATTCATCAAGTGGCAAAAAAAAAAAAAAAAAAAAAAAAAGAAGCCAGTTACTTTTTTTAGTGTAGCTTACTTATTAAGAATGCTTCAGTCAAATTTTATGAAAATTGAGAATAATAGATTTTATGGTTATTCTTGCAAAATGTCCTCTTTCTGAGTTAACTTGTAACTAAAAGTGATGATTTCTCTCTTTTGTCACCCCAAGTTCTCTTGGAACACAAACTCCTCCCTGGGGATAGGCAACTCAGAAGAGGACATAAGAAAATGATAACTTAATGGGACCCCAGTGGGCTCTAAAATTTAATACCACCAAAAAAATTAATGAAGCTTCTAAAGCAAGGGATGTTAAGTCTGAGGATAACTTATGCATTGGGATGATCTGGCTTGTTACTGGCATTATTTAACATTTCCCAGGCACTGAAGTACAGCATGACTAAACATCCAAAAACAGGACAGGACAACAATTTTGACTCCTATATGCAGGAAAATGTACTTCAAATTCGAAGAATATAAAGTACCTTAAAATGGAAGAAAACAACTAGTTGGAAGGAAAAGTTCCTCTTTACACTAATCCAGCTAATAAATACATAGATGAAAAAATGATAGAATTCTATACCAAGAAGATATCTCAAAATCATGCAATTACACGGAAGTTAAACAATTGGCTCTTGAATGACTTTTGGGTAAACAATGAAATCAAGGCAGAAATTAAAAAATTATTTCTAGCGGAACTAGAAAACAAGAAGAGACCAACCCTAAAGCTAGCAGAAGAGAAGAAATAATGAAAATTAGAGAAGAATTGAATAAAACTGAGATGCAAAAATCCACATAAAAGATCAATGAAACTAAAAGTAGATTCTTTGAAAGAATAAACAAGATTGATAGACCACAATTAGATGAACAAAGAAAAAAAGGGAGAAGTTCCACATAAGCACAAGGAGAAATGACAAGGATGACATTACAACCGATTCCACTGAAATAATAAAGGTTTTTAGAGACTAGCATGAACATCTCAATGCATATACATTAGGAAATTTAGAGTAAATGGATACATTTATGGAAGCACACAACCTCCTAAGATTGAATCAGGAAGAAATTGAAAATCTGAAACCTACCAACCAAAAAAAAGCCCGGGACCAGATGGATTTGCAGCCGAATGCTACTAGACACACAAAGAAGAGCTTGTACCAATCCTACTGAAACTATTCCAAAATTTGAGAAGAAAGAACTCCTCCGTAACCCTTTCTAAATCCTAAAGATGCTACCAGGAAGCTCCTAGAACTGATCAATGACTTCAGTAAAGTTTCAGGATACAAAATCAATGTATAAAATCAGCAGCATTTCTATACACCAATAATATTCAAGCTGAGAGCCAAATCAAGAACGCAATCCCATTTACAATAGCCATTTACAAAAATGAAATACCTTGGAATAGTGCTAACCAAGGAAGTGAAAGATCTCTACAAGGAGAACTAGAAAACACTGCTGAAAGAAATCAGAAACTACCCAAATAAATGAAAAAACACTCCACGCTCATGAATAGGAAGAATTCATATCATTACAATGACCATACTGCCCAAATCAATGTACAGATTTAATGCTATTTCTATTAAACTACCAATGTATTCTTTTACAGAATTAGAAAATACCATTCTAAAATTCATATGAAACCAAAAAAAGACCCCAAATAGCCAAAGCATTCCTAAGCAAAAAGAACAAAGCTGTAGGAATCACACCACCTAACTTCAAACTACATTACAAGTCTACAGTAACAAAACAGCATAGTACTGATATAAAAACAGACACACAGAGGAATGGAACAGAATAGAGAGCCCAGAAATGATACTGCATACCCGCAACCATCTGATCTTTGACAAAGTCGACAAAAAATAAGCAACGAAGAAAGGACTCTCTATTCAATAAATGGTACTGGAATAACTAGCTAGTCATATGCAGAAGATTGAAACTGGATCCCTTTCCTGTAAGGAAAGGGTATGACTAGCTAGTTATCCCAGCACCATTTATTGAATAGAGAGTCCTTTCTTCGTTGCTTATTTTTGTCGACTTTGTCAAAGATCAGATGATTGCGGGTGTGCAGTATCATTTCTGGGCTCTCTATTCTGTTCCATTCCTCTGTGTGTCTGTTTTTATATCAGTACTATGCTCTTTTGTTACTGTAGACTTGTAATGTAGTTTGAAGTTAGGTGGTGTGATTCCTGCAGCTTTGTTCTTTTTGCTTAGGAATGCTTTGGCTATTTGGGGTCTTTTTTTGGTTTCATATGAATTTTAGAATGGTATTTTCTAATTCTGTAAAAGAATACATTGGTAGTTTAATAGAAATAGCATTAAACCTGTACATTGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACACTGGGGCCTGTTGTGGGGGTGGGGGGAGGGGGGAGGAATAGCATTGGGAGATATACCTAATGCTAAATGACCAGTTAATGGGTGCAGCACACCACCATGGCACATGCATACATATGTAACAAACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTATAATTTAAAAAAAAGACTTCATTTTTTTTCAACAATTTCATTATTATGCTAAAAAGAGGGAGGGTAAGTAATGTTTTACTTTCCTTTAGTACATGATTAAGATCTATATAAAAAAAAATAAACTCAGGATGTTTTAAAGTCTTAAAACCTAAAACCATAAAAACCCTGGAATATAACCTAGAAAATAACATTTGGGACATAGGTCTAGGCACGGATTTCATGATGAAAATGCCAAAAGCAATTGCAACAAAAACAAAAATGACAAATGTAAGACCTAATTAAACTAAAGAGCTTCTGGACAGTGAAAGAAACTATCAACAAACAGACACCATAATAATGGGAGAAAATATTTGCCAACTATGCATCTGACAAAGGTCTACTACCCAGAATCTATAACGAACTTAAATCAACAAGCAAAAAAAAAACCCCATTAAAAAATGGGCAAAGAACATAAACAGACATTTCTAAAAAGAAGATATACAAGTGGCCAAAAAACATGAAAAAATGTTCATCGCTAATCATCAGAGAAATGCAAATAAAAACCTCAGTGAGATACCATTACAATTAAATATAGGGTAACCAGATATCATGGGGTCTCAGTGATTTGAAGCAATAAGAAGTAAAAAATAGCTGCTCACTTCAGCAGCACATATACTAAAATTGGAATGATATAGAGATAATAAAAAAGAAAAAAGAAAAAAATTATGTTTTTAAAAATAGTGAGAAACAGCACATGTGAAGTATACTTGTCAAAATACTTGAGCCTGACTCTAAGAAGTCCTCCACATATGCCAGTTTATAGGATATTCAGGGAATAGAAGAAAGTTAATTTCTATATCACAAGGGAGTAATCACTTACATGCAGATTGTGGGACATTTGATTACATGTATCAATGGAATAAATAAAACAAGGATCAACTGTTATAAAACAAATGAGACTAAAAAGACCTAACAACTTCATGCAATACATGGACTTTTAGGGATTCTGACTCAAAGGAATTAAGTAAATGAAATATTTTCATGATAGTAAGAAATTACTGACTTTTAAAGTATGGTGGTTACTTGAAAATAGTCTTCTCAGAGAAGCATACTCAAGTATTTACAGTTGAAATGCCCTAATGTCTGAGATTTGCTTTAAAATGTATTCTGGCTGAAATATATGGGTCAGTAGATGAGTTGAGTCTGGTCATATGCTGATATGTATAAATGCTGGGTAACGGGTCTATGAGGGCCGATTTGAGTGTTTTCTGTATTTCTTGTTACATTTGAAAATTTTCATAAAAGAAGGGGAATTTAGTATCCCATGGATAGAGGAAGAGATAGTAAGTGAAGGAATTGCATTTTCTATGACTAAAGACTTGAAGACACAGTGGCACAATCGGATCAAATCTGGGTATTGTTTAGGGTTGATATGAAATTTTTGGACACTGCTCAGATACAGTCACAAAACAAAGAGAACTTTTGATGATGTTTTCACCTGTCATTTTTATAAATTGATTTCAATCATTTCTTCTTGTGAATTTTATCTACTTATAAGATGCATATAGTATGGTTTCTAAAGCATATTACTGGTAGTTGCTCTATTGATTTCACTAAATCAACAGTTTTGTTGGTTTTGATGATTTGAATATTGCCAAAATATCAAATTTTCTAGTCTAGTTTTTAAAGTAATTTCTGAGGGAAGAAAGAAATTATTTCCCATTCTATTGCAAGTGGTAGTGTGATAGCAGCACTGGGTGTTTACAGGTGAAACAGAAAATGCCAAACAGTGATTTCACATGACCGACAAGAAAGGAGCTGTTAAAATTAGCTACAAGAAGAGCCTGGGCTGATAAGACCCTAACAAACAGGATATGGACTACTTTAGTTGAAACTGGCTAGAATTCAAACTTGTCCAACGCGTGGTCCATGAGCTGCATGCAGCCCAGAGTGGCGTTGAGTGAGGCCCAGCACAAATTTGTAAACTTTCTTAAAACGTTATGAGATTTGCTTGCGATTTTTGTTTTTTGTTATTTTTTTTTTTAGCTCATCAGCTATCGTTAGTGTTAGCATATTTTATGTGTGGCCCAAGAAAATTCTTCCAATGTGGCACAGGGAAGCCAAAAGATTGGAAACCCCTGGGCTACATCCAAGACGGAGCTGGATTGGACCCAGGCTCTACCCCAGACTTAATTATACACTCATTATCATCACGCTAAACCACATACCTACCAGCACCGTGACATACCTGAGGACACCTATGTTTGGTATCAACATGGGTGACACCTCAATTCCAAGAAATTCCTGCTGTTTCCCCTAAAACCTCATGATTATTCTACTCCTTAATTAGAAAAACCCATAAAAATAGAAAACTGAACTGTGTCAGGCACGACTTGCTCTCTGGAGTACCCCCACATGCCCCTCTCGAGTGTGTACTTCCGTTTTGCAATAAAACCCTTTTGCCTTTTGTTTGCTTTGCTTTGATTCGTCCTTGAATTCTTTCTCATGACAGTGTCAAGAACCTGGAAACAGGGTAGGGTTAGGGGTCTCACCGACACCTGGAGACCTCCTGGGCCCTCCAGGGACCATAGTTTCCAATTTCTTTATGTAATAGAGCTGTAGTGGTAAGTAAAATGATCATAATATTGTTTTATCTATTTTACTTTGAAAATATTTTCTCATCTCTCATTCAAATGTTGTAGATACACACACGATTTGACAGTAATTTACTCCAAGCCAATTGAAGTATTAATCATGTGAGATATGGTTGTATCTGGTCAAGTACCTAAAAAAAGCACCACAGCAAGATAGGGAAACTGAGGTAATCAATAATATGTAAGGATCTGCATTGTTTAAAAGGTGCTGAATAGCAAGACAACTTGGCTATGATAATGCAGTGACAGGTGTGTGCATATGCAGAGGGTCCACATTATAATACAAACATTTAATCACATACATCCTCCTCACAGAGTCTCCCCAAAACAAACAAATTCACATGATTTCCTATCTTCCTTCCTCACTGTTTATGATTTCTACACCCTCTCAGACCTACAGAATGCAAACCTGTATGAGTGAAACAGTTATACCTGACTTGGCATGAACCCACCTACAAAACAGAATTTATGTTTTGTTCTGATGTCTCATCCTTTTTAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9984:HG2_PB_pbsv_16168:HG2_PB_PB10Xdip_12595:HG2_PB_SVrefine2Falcon2Bionano_7955:HG2_PB_assemblyticsfalcon_9966:HG4_PB_assemblyticsfalcon_9766:HG4_PB_SVrefine2Falcon1Dovetail_9968:HG2_PB_SVrefine2Falcon1plusDovetail_4418:HG3_PB_SVrefine2PBcRDovetail_7811:HG2_PB_SVrefine2PBcRplusDovetail_4041:HG2_PB_SVrefine2PB10Xhap12_11710:HG3_Ill_SVrefine2DISCOVARDovetail_11591:HG4_Ill_SVrefine2DISCOVARDovetail_11389:HG4_PB_SVrefine2PBcRDovetail_8081;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11710:HG2_PB_SVrefine2PBcRplusDovetail_4041;NumExactMatchSVs=2;ClusterMaxShiftDist=0.121987;ClusterMaxSizeDiff=0.121987;ClusterMaxEditDist=0.159836;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=7813;DistBack=47452;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=297;REFWIDENED=16:76056639-76056935;PctSeqSimilarity=0.9984;PctSizeSimilarity=1;PctRecOverlap=0.9816;SizeDiff=0;StartDistance=-144;EndDistance=-144;GTMatch=0;TruScore=99;MatchId=2067.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:135:1/1:0:33:1:16:./.:0:5:0:2:1/1:0:49:1/1:0:637:.:7653:.
chr16	76454093	HG2_Ill_Krunchall_21873	T	TATGTATATTCTGTAGAATATATATTAGAATAATGTATATTCTGTAGAATATATATTAGAATAATGTATATTCTGTAGAATATATATTAGAATA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4809:HG2_PB_HySA_29559:HG3_PB_pbsv_15828:HG4_Ill_Krunchall_22201:HG4_PB_HySA_23624:HG4_Ill_250bpfermikitraw_21196:HG3_Ill_Krunchall_21475:HG3_Ill_250bpfermikitraw_20923:HG2_Ill_Krunchall_21873:HG2_Ill_250bpfermikitraw_21534:HG3_PB_HySA_24523:HG3_Ill_SVrefine2DISCOVARDovetail_11595:HG2_PB_SVrefine2Falcon1plusDovetail_4419;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21534:HG2_Ill_Krunchall_21873:HG3_Ill_250bpfermikitraw_20923:HG3_Ill_Krunchall_21475:HG4_Ill_250bpfermikitraw_21196:HG4_Ill_Krunchall_22201;NumExactMatchSVs=6;ClusterMaxShiftDist=0.244444;ClusterMaxSizeDiff=0.244444;ClusterMaxEditDist=0.288889;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=93;DistBack=7;DistForward=17;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=98;REFWIDENED=16:76454086-76454183;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2068.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:28:./.:13:11:10:13:1|0:1:23:11:0:0/1:28:17:./.:.:.:.:.:.
chr16	77564424	HG3_Ill_250bpfermikitraw_20937	T	TTGTGGAAGTCAGTGTGGTGATTCCTCAAGAATCTAGAACTAGAAATACCATTTGACCC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_21550:HG2_PB_pbsv_16174:HG4_Ill_manta_3748:HG4_PB_pbsv_16095:HG3_Ill_manta_3602:HG2_Ill_manta_4417:HG4_PB_assemblyticsfalcon_9774:HG2_PB_assemblyticsfalcon_9977:HG3_PB_HySA_24530:HG4_PB_HySA_23633:HG4_Ill_GATKHC_25731:HG4_Ill_GATKHCSBGrefine_11028:HG3_Ill_GATKHC_25650:HG3_Ill_GATKHCSBGrefine_10603:HG2_Ill_GATKHC_25793:HG2_Ill_GATKHCSBGrefine_10665:HG2_PB_HySA_29572:HG4_Ill_svaba_20084:HG3_PB_pbsv_15833:HG4_Ill_Krunchall_22215:HG4_Ill_250bpfermikitraw_21210:HG3_Ill_svaba_20293:HG3_Ill_Krunchall_21492:HG3_Ill_250bpfermikitraw_20937:HG2_Ill_svaba_20114:HG2_Ill_Krunchall_21883;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21550:HG4_Ill_svaba_20084:HG4_Ill_Krunchall_22215:HG4_Ill_250bpfermikitraw_21210:HG3_Ill_svaba_20293:HG3_Ill_Krunchall_21492:HG3_Ill_250bpfermikitraw_20937:HG2_Ill_svaba_20114:HG2_Ill_Krunchall_21883;NumExactMatchSVs=9;ClusterMaxShiftDist=0.205128;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.368;PBcalls=8;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=55840;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=16:77564425-77564482;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2069.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:0:18:1:19:1/1:1:17:1:22:1/1:0:55:./.:.:.:.:.:.
chr16	77747569	HG2_PB_SVrefine2PBcRplusDovetail_4044	A	AATACTATGCATGATATCCTCCCGATCTTTCTGCTAATATCACAGGGGCTTTACACCATGTGATATTAGATATGATATTCTCGCGATCTTTCTGCTAATATCACAGTGACTGTTACACCCTGCGTTACACCATGTGATCTTATACATGATATCCTCCCGATCTTTCTGCTAATATCACAGTGGCTTTACACCATGTGATATTATACATGATATCCTCCCGATCTTTCTGCTAATATCACAGTGGCTTTATACCATGTGATATTATACATGATATCCTCCCGATCTTTCTGCTAATATCACAGTGGCTTTACACCATGTGATCTTATACATGATATCCTCCCGATCTTTCTGCTAATATCACAGTGGCTTTACACCATGTGATATTATACATGATATTCTCGCGATCTTTCTGCTAATATCACAGTGGCTTTACACCATGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7957:HG4_PB_assemblyticsfalcon_9776:HG2_PB_pbsv_16175:HG4_PB_SVrefine2Falcon1Dovetail_9970:HG3_PB_pbsv_15834:HG2_PB_PB10Xdip_12598:HG3_PB_SVrefine2Falcon1Dovetail_9988:HG2_PB_SVrefine2Falcon1plusDovetail_4422:HG2_PB_SVrefine2PBcRplusDovetail_4044:HG2_PB_SVrefine2PB10Xhap12_11713;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7957:HG2_PB_SVrefine2PBcRplusDovetail_4044:HG2_PB_SVrefine2PB10Xhap12_11713;NumExactMatchSVs=3;ClusterMaxShiftDist=0.114155;ClusterMaxSizeDiff=0.114155;ClusterMaxEditDist=0.301552;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=440;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=555;REFWIDENED=16:77747570-77748124;PctSeqSimilarity=0.9788;PctSizeSimilarity=0.9705;PctRecOverlap=0.6304;SizeDiff=13;StartDistance=-156;EndDistance=-156;GTMatch=0;TruScore=85;MatchId=2070.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:81:./.:2:5:2:34:./.:0:12:1:8:1/1:0:9:0/1:1:8:.:.:.
chr16	77849789	HG2_Ill_MetaSV_1833	C	CGGGAGGTGGAGGTTGCAGTGAGCTGAGATCGCACCATTGTACTCCAGCTGGGTGACAAGAGTGAACCAAAACTCTATCTCAAAAAAAAAAAAATAAAAATAAAAATAAAAAGAACTAGTTCAAGTCATCTAGCTTGGAAAAGAAGCTGTGGTTGGATGCTAATGGATGTTGGGTCAGACTGAAGAGTGTACTTTCTATAGTCTGAGTCTTTCTTAGATGGCGGCTTCTAAAAATAGAAAGTACAGGCTGGGTACAGTAGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCAGGCCAACATGGTGAAACCCCATCTATATTAAAAATACAAAAAATAGCCAGGCGTGGTGGCGGGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATTGCTTGAACCT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4817:HG4_Ill_Spiral_1266:HG4_PB_pbsv_16096:HG2_PB_PB10Xdip_12599:HG2_PB_pbsv_16176:HG3_PB_pbsv_15835:HG4_Ill_MetaSV_1894:HG4_Ill_GATKHCSBGrefine_11029:HG2_Ill_MetaSV_1833:HG3_Ill_manta_3603:HG3_Ill_MetaSV_1951:HG3_Ill_GATKHCSBGrefine_10604:HG2_Ill_GATKHCSBGrefine_10666:HG2_PB_SVrefine2PBcRplusDovetail_4045:HG2_PB_SVrefine2PB10Xhap12_11714:HG4_Ill_SVrefine2DISCOVARDovetail_11396:HG2_PB_SVrefine2Falcon2Bionano_7958:HG2_10X_SVrefine210Xhap12_11220:HG4_PB_SVrefine2PBcRDovetail_8084:HG4_PB_SVrefine2Falcon1Dovetail_9971:HG3_PB_SVrefine2Falcon1Dovetail_9989:HG3_PB_SVrefine2PBcRDovetail_7815:HG2_PB_SVrefine2Falcon1plusDovetail_4423:HG3_Ill_SVrefine2DISCOVARDovetail_11601;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_MetaSV_1833:HG4_Ill_GATKHCSBGrefine_11029:HG4_Ill_MetaSV_1894;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0668824;ClusterMaxSizeDiff=0.0625674;ClusterMaxEditDist=0.2173;PBcalls=12;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=451;DistBack=-97;DistForward=61619;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=301;REFWIDENED=16:77849584-77849884;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2071.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:23:1:20:./.:1:7:2:6:1/1:1:16:1/1:3:74:.:.:.
chr16	80797161	HG2_PB_SVrefine2Falcon2Bionano_7965	C	CTGTGGCTACTCAACAGCTAACCTATCCCCATTATCTCCAACAAAGAATAGAATCTTTTCATCAGGGCTAGGCATGGTTTCAAACCTGTAATCCCAGCACTGATGAAAAGATTCTATTCTTTGTTGGAGATAATGGGGACAGGTTAGCTGTTGAGTAGACACAGTTGATTCTCGTTACT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11230:HG2_PB_pbsv_16189:HG3_PB_SVrefine2PBcRDovetail_7822:HG3_PB_SVrefine2Falcon1Dovetail_9998:HG3_Ill_SVrefine2DISCOVARDovetail_11618:HG2_PB_SVrefine2PBcRplusDovetail_4054:HG2_PB_SVrefine2PB10Xhap12_11725:HG2_10X_SVrefine210Xhap12_11231:HG3_PB_HySA_24553:HG2_PB_HySA_29598:HG4_PB_pbsv_16108:HG3_PB_pbsv_15847:HG4_Ill_MetaSV_1897:HG4_Ill_GATKHCSBGrefine_11038:HG4_Ill_150bpfermikitraw_20452:HG3_Ill_MetaSV_1959:HG3_Ill_GATKHCSBGrefine_10614:HG2_Ill_MetaSV_1838:HG2_Ill_GATKHCSBGrefine_10676:HG2_PB_PB10Xdip_12618:HG4_PB_SVrefine2PBcRDovetail_8090:HG4_PB_SVrefine2Falcon1Dovetail_9977:HG4_Ill_SVrefine2DISCOVARDovetail_11412:HG2_PB_SVrefine2Falcon2Bionano_7965:HG2_PB_SVrefine2Falcon1plusDovetail_4432:HG2_Ill_SVrefine2DISCOVARplusDovetail_4840;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11230:HG4_PB_SVrefine2PBcRDovetail_8090:HG4_PB_SVrefine2Falcon1Dovetail_9977:HG4_Ill_SVrefine2DISCOVARDovetail_11412:HG2_PB_SVrefine2Falcon2Bionano_7965:HG2_PB_SVrefine2Falcon1plusDovetail_4432:HG2_Ill_SVrefine2DISCOVARplusDovetail_4840;NumExactMatchSVs=7;ClusterMaxShiftDist=0.060274;ClusterMaxSizeDiff=0.060274;ClusterMaxEditDist=0.20765;PBcalls=14;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=178;DistBack=39274;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=102;REFWIDENED=16:80797162-80797263;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9944;PctRecOverlap=0.9497;SizeDiff=1;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=97;MatchId=2074.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:81:1/1:0:36:1:31:./.:5:31:2:23:1/1:0:31:./.:.:.:.:.:.
chr16	81140204	HG2_Ill_GATKHCSBGrefine_10678	T	TATCATTCCGATTTTAGCATATGTGCTGCTGAAGTGAACACTGGCTCAGTATTTTCAATAATTTTGTGCATGAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_12619:HG2_PB_pbsv_16191:HG3_PB_pbsv_15849:HG4_PB_pbsv_16112:HG4_PB_HySA_23663:HG4_PB_assemblyticsfalcon_9802:HG4_Ill_svaba_20107:HG4_Ill_manta_3752:HG4_Ill_Krunchall_22244:HG4_Ill_GATKHCSBGrefine_11041:HG4_Ill_250bpfermikitraw_21236:HG4_Ill_150bpfermikitraw_20457:HG3_Ill_svaba_20329:HG3_Ill_manta_3606:HG3_Ill_Spiral_16729:HG3_Ill_Krunchall_21522:HG3_Ill_GATKHC_25689:HG3_Ill_GATKHCSBGrefine_10616:HG3_Ill_250bpfermikitraw_20968:HG3_Ill_150bpfermikitraw_20403:HG2_PB_assemblyticsfalcon_10003:HG2_Ill_svaba_20143:HG2_Ill_manta_4421:HG2_Ill_SpiralSDKrefine_6305:HG2_Ill_Krunchall_21911:HG2_Ill_GATKHC_25826:HG2_Ill_GATKHCSBGrefine_10678:HG2_Ill_250bpfermikitraw_21577:HG2_Ill_150bpfermikitraw_20345:HG3_PB_HySA_24557:HG2_PB_HySA_29601;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20345:HG2_Ill_250bpfermikitraw_21577:HG2_Ill_GATKHCSBGrefine_10678:HG2_Ill_GATKHC_25826:HG2_Ill_Krunchall_21911:HG2_Ill_SpiralSDKrefine_6305:HG2_Ill_manta_4421:HG2_Ill_svaba_20143:HG2_PB_assemblyticsfalcon_10003:HG3_Ill_150bpfermikitraw_20403:HG3_Ill_250bpfermikitraw_20968:HG3_Ill_GATKHCSBGrefine_10616:HG3_Ill_GATKHC_25689:HG3_Ill_Krunchall_21522:HG3_Ill_Spiral_16729:HG3_Ill_manta_3606:HG3_Ill_svaba_20329:HG4_Ill_150bpfermikitraw_20457:HG4_Ill_250bpfermikitraw_21236:HG4_Ill_GATKHCSBGrefine_11041:HG4_Ill_Krunchall_22244:HG4_Ill_manta_3752:HG4_Ill_svaba_20107:HG4_PB_assemblyticsfalcon_9802;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0927152;ClusterMaxSizeDiff=0.0662252;ClusterMaxEditDist=0.179487;PBcalls=9;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=73;DistBack=-1;DistForward=1582;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=16:81140203-81140206;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2075.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:1:21:0:21:1/1:0:20:0:20:1/1:0:42:./.:.:.:.:.:.
chr16	81610565	HG2_PB_SVrefine2Falcon1plusDovetail_4435	T	TCATCATCACCACCACTATTAGCATCACCACCATCATCCCCATTACCACTACATTATTATCACTATCACCATCACCATCATCACCATCATAACCATCACCTTCATCACCACCATCATCCCCATTACCACTACATTATTATCACTATCACCATCACCACCATCATAACTATCACCTTCATCACCACCATCATCCCCATTACCACTACATTATTATCACTATCACCATCACCATCATCACCATCATAACCATCACCTTTATCACCACCATCATCCCCATTACCACTACATTATTATCACTATCACCATCACCACCATCATCACCATCACCTTCATCACCACCATCATCCCCATTACCACTACATTATTATCACTATCACCATCACCATCATCACCATCACCACCATCATAACCATCACCTTCATCACCACCATCATCCCCATTACCACTACATTATTATCACTATCACCATCACCATCATCACCATCACCTTCATCACCACCATCATCCCCATTACAACTATATTATTATCACTATCACCATCATCACCATCACCTTCATCACCACCATCATCCCCATTACCACTACATTATTATCACTATCACCATCACCACCATCATCACCATCACCTTCATCACCACCATCATCCCCATTACCACTACATTATTATCACTATCACCATCACCATCATCACCATCACCTTCATCATCACCGTCATCCCCATTACCACTACGCTATTATCACTATCACCATCACCATCATCACCATCACCTTCATCATCACCATCATCCCCATTACCACTACGCTATTATCACTGTCACCATCACCATCATCACCATCACCTTCATCATCACCATCATCCCCATTACCACTACGCTATTATCACTGTCACCATCAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4057:HG2_PB_PB10Xdip_12623:HG3_PB_pbsv_15853:HG2_PB_HySA_29606:HG4_PB_SVrefine2Falcon1Dovetail_9981:HG2_PB_SVrefine2PB10Xhap12_11731:HG2_PB_SVrefine2Falcon2Bionano_7970:HG2_PB_SVrefine2Falcon1plusDovetail_4435:HG3_PB_SVrefine2Falcon1Dovetail_10002;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4435:HG2_PB_SVrefine2Falcon2Bionano_7970:HG2_PB_SVrefine2PB10Xhap12_11731;NumExactMatchSVs=3;ClusterMaxShiftDist=0.169738;ClusterMaxSizeDiff=0.166387;ClusterMaxEditDist=0.238973;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=894;DistBack=19621;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1335;REFWIDENED=16:81610566-81611900;PctSeqSimilarity=0.9884;PctSizeSimilarity=0.9832;PctRecOverlap=0.7743;SizeDiff=15;StartDistance=-194;EndDistance=-194;GTMatch=0;TruScore=91;MatchId=2076.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:68:0|1:28:4:2:38:./.:21:79:0:98:0/1:9:9:0/1:19:24:.:.:.
chr16	81798658	HG2_PB_HySA_29613	A	ACTCCAGCCTGGGTGACAGAGTGAGATGAAGACACTGTCCCCCCACAAAAAAAATAAATCAATGACTGGTGTGTCATAAGAAGAGGGACATTTGGACACAGAGACATGCACAGAGGGAAGATGATATGAAGGCAACACAGCGACACACAGGGAGAGCACCATGTGACAACTGAGGCAGAGGATGGGGAGAGGCATCTGCAAACCAGAACACACAAAAGATTCCCAGCAACCACCCAAAGCTTGGAGAGAGGCATGGGACAATCTCCCGCAGAGCCTCCGGAAGAAAGCAACCATGCCGGCCAGGTGTGGAGGCTCATGCCTGTAATTCCAGCACTTTGGGAGGCCCAGGAGGGCAGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGGCTACATGATGAAACCCTGTTTCTACATAAAATACAAAAATTAGCTGGGCGTCATGATGGGCACCTGTAATCCCAGCTACCCGGGAGGCTGAGGCAGGAGAATTGCTTGGACCCGAGAAGCAGAGGTTGCTGTGAGCTGAGGTGGTGCTAGTGCCCTCCAGCCTGGGTGACAGAGTGAGATGAGACACTGTCCCCCACACAAAAAAAATAAATCAATGACTGGTGTGTCATAAGAAGAGGGACATTTGGACACAGAGACATGCACAGAGGGAAGATGATATGAAGGCAACACAGCGACACACAGGAGAGAGCACCATGTGACAACTGAGGCAGAGGATGGGAGAGGCATCTGCAAACCAGAACAACACAAAAGATTCCCAGCAACCACCCAAAGCTTGGAGAGAGGCATGGGACAATCTCCCGCAGAGCCTCCGAGAGAAGCAACCATGCCGGCCAGGTGTGGAGGCTCATGCCTGTAATTCCAGCACTTTGGGAGGCCCAGGAGGGCAGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGGCTACATGATGAAAACCTGTTTCTACATAAAATACAAAAATTAGCTGGGCGTCATGATGGGCACCTGTAATCCCAGCTACCCGGGAGGCTGAGGCAGGAGAATTGCTTGGACCGGAGAAGCAGAGGTTGCTGTGAGCTGAGGTGGTGCTAGTGCCCTCCAGCCTGGGTGACAGAGTGAGATGAGACACTGTCCCCCACAAAAAAAATAAATCAATGACTGGTGTGTCATAAGAAGAGGGACATTTGACACAGAGACATGCACAGAGGGAAGATGATATGAAGGCAACACAGCGACACACAGGGAGAGCACCATGTGACAACTGAGGCAGAGGATGGGAGAGGCATCTGCAAACCAGAACACACAAAAGATTCCCAGCAACCACCCAAAGCTTGGAGAGAGGCATGGGACAATCTCCCGCAGAGCCTCCGGAAGAAAGCAACCATGCCGGCCAGGTGTGGAGGCTCATGCCTGTAATTCCAGCACTTTGGGAGGCCCAGGAGGGCAGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGGCTACATGATGAAACCCTGTTTCTACATAAAATACAAAAATTAGCTGGGCGTCATGATGGGCACCTGTAATCCCAGCTACCCGGGAGGCTGAGGCGGAGAATTGCTTTGACCGAGAAGCAGAGGTTGCTGTGAGCTGAGGTGGTGCTAGTGCC	10	PASS	ClusterIDs=HG2_PB_HySA_29613:HG2_PB_pbsv_16200:HG2_PB_PB10Xdip_12628;NumClusterSVs=3;ExactMatchIDs=HG2_PB_HySA_29613;NumExactMatchSVs=1;ClusterMaxShiftDist=0.030303;ClusterMaxSizeDiff=0.0290909;ClusterMaxEditDist=0.105423;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1626;DistBack=-568;DistForward=1420;DistMin=-568;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=572;REFWIDENED=16:81798655-81799226;PctSeqSimilarity=0.9951;PctSizeSimilarity=0.9982;PctRecOverlap=0.9988;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2078.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:52:0|1:25:1:1:16:./.:13:16:13:0:0/1:27:17:0/1:47:35:.:1781:.
chr16	82791081	HG2_Ill_SVrefine2DISCOVARplusDovetail_4854	A	AATTATGTCAACATTTAATTGCAAGAGATAGCTGCTCTGCCCAGAGGGCTTCCGGAACACCTTAGCTTTTGGTTTAAAGCTCAATTTTAGGTAACTGATCAGGTAGAAGCTAGTTTGACTACCGCAGCTTGCAAATGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4854:HG2_PB_pbsv_16206:HG2_PB_HySA_29624:HG4_PB_pbsv_16127:HG4_PB_HySA_23685:HG2_PB_SVrefine2Falcon2Bionano_7975;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4854:HG2_PB_SVrefine2Falcon2Bionano_7975;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0968858;ClusterMaxSizeDiff=0.0899654;ClusterMaxEditDist=0.294521;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=137;DistBack=11251;DistForward=24;DistMin=24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=138;REFWIDENED=16:82791082-82791219;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2079.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:41:1|0:9:33:32:5:./.:0:9:1:1:0/1:10:11:./.:.:.:.:.:.
chr16	82827967	HG4_PB_assemblyticsfalcon_9820	A	ACACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAGGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATAGCCGGGCCGGGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACACTTT	10	PASS	ClusterIDs=HG4_PB_pbsv_16128:HG4_PB_assemblyticsfalcon_9820:HG2_PB_pbsv_16207:HG4_PB_SVrefine2Falcon1Dovetail_9988:HG2_PB_SVrefine2Falcon2Bionano_7976;NumClusterSVs=5;ExactMatchIDs=HG4_PB_assemblyticsfalcon_9820;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0546624;ClusterMaxSizeDiff=0.0514469;ClusterMaxEditDist=0.166405;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=307;DistBack=6510;DistForward=47729;DistMin=6510;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=16:82827968-82827967;PctSeqSimilarity=0.9906;PctSizeSimilarity=0.9935;PctRecOverlap=0.9577;SizeDiff=2;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=98;MatchId=2080.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:23:0|1:39:1:1:13:./.:2:5:24:0:0/1:28:14:0/1:7:26:.:.:.
chr16	83431679	HG2_Ill_150bpfermikitraw_20363	G	GCTTGAGTGTACAGCAGAATCCCATTTATTCAATTACTCCAGACCAGTGTATCCGAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11242:HG3_PB_pbsv_15865:HG3_PB_HySA_24581:HG3_Ill_svaba_20353:HG3_Ill_manta_3611:HG3_Ill_Spiral_16752:HG3_Ill_Krunchall_21545:HG3_Ill_GATKHC_25718:HG3_Ill_GATKHCSBGrefine_10629:HG3_Ill_Cortex_1394:HG3_Ill_250bpfermikitraw_20992:HG3_Ill_150bpfermikitraw_20431:HG2_Ill_svaba_20163:HG2_Ill_SpiralSDKrefine_6322:HG2_Ill_Krunchall_21930:HG2_Ill_GATKHC_25851:HG2_Ill_GATKHCSBGrefine_10691:HG2_Ill_Cortex_3269:HG2_Ill_250bpfermikitraw_21595:HG2_Ill_150bpfermikitraw_20363:HG2_PB_HySA_29633:HG3_PB_SVrefine2PBcRDovetail_7830:HG3_Ill_SVrefine2DISCOVARDovetail_11635:HG2_Ill_SVrefine2DISCOVARplusDovetail_4857;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20363:HG2_Ill_250bpfermikitraw_21595:HG2_Ill_Cortex_3269:HG2_Ill_GATKHCSBGrefine_10691:HG2_Ill_GATKHC_25851:HG2_Ill_Krunchall_21930:HG2_Ill_SpiralSDKrefine_6322:HG2_Ill_svaba_20163:HG3_Ill_150bpfermikitraw_20431:HG3_Ill_250bpfermikitraw_20992:HG3_Ill_Cortex_1394:HG3_Ill_GATKHCSBGrefine_10629:HG3_Ill_GATKHC_25718:HG3_Ill_Krunchall_21545:HG3_Ill_Spiral_16752:HG3_Ill_manta_3611:HG3_Ill_svaba_20353;NumExactMatchSVs=17;ClusterMaxShiftDist=0.118644;ClusterMaxSizeDiff=0.101695;ClusterMaxEditDist=0.20339;PBcalls=4;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=57;DistBack=18135;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=16:83431649-83431701;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2081.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:./.:16:7:18:17:0|1:18:0:1:21:0/1:30:29:./.:.:.:.:.:.
chr16	83666360	HG2_10X_SVrefine210Xhap12_11245	T	TAAGAAAGTAAAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAATAAATAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_29638:HG3_PB_HySA_24585:HG3_PB_pbsv_15869:HG4_PB_pbsv_16133:HG4_PB_assemblyticsfalcon_9831:HG2_PB_SVrefine2Falcon1plusDovetail_4443:HG2_PB_pbsv_16214:HG3_Ill_MetaSV_1967:HG2_PB_SVrefine2Falcon2Bionano_7979:HG2_10X_SVrefine210Xhap12_11245:HG3_PB_SVrefine2Falcon1Dovetail_10015:HG4_PB_SVrefine2Falcon1Dovetail_9991:HG2_PB_HySA_29639;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11245:HG2_PB_SVrefine2Falcon2Bionano_7979:HG3_Ill_MetaSV_1967;NumExactMatchSVs=3;ClusterMaxShiftDist=0.218126;ClusterMaxSizeDiff=0.218126;ClusterMaxEditDist=0.251944;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=333;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=16:83666361-83666374;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2082.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:39:./.:8:21:20:9:0|1:20:0:0:5:0/1:37:15:0/1:9:30:.:.:.
chr16	83964429	HG4_Ill_GATKHCSBGrefine_11059	A	ACCTGGGAGGAGGCACAGGGAGGGCACCGGGGTTGGTAGAAACCTCCATCCCCAGGGCTCCCACACCCTCACAGCCAGCAGGGCCG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8103:HG4_Ill_GATKHC_25809:HG4_Ill_GATKHCSBGrefine_11060:HG2_PB_HySA_29643:HG2_PB_pbsv_16218:HG2_PB_PB10Xdip_12644:HG4_PB_pbsv_16137:HG4_Ill_GATKHC_25808:HG4_Ill_GATKHCSBGrefine_11059:HG4_Ill_250bpfermikitraw_21268:HG2_Ill_GATKHC_25859:HG2_Ill_GATKHCSBGrefine_10694:HG2_Ill_250bpfermikitraw_21601:HG4_PB_HySA_23701;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21601:HG2_Ill_GATKHCSBGrefine_10694:HG2_Ill_GATKHC_25859:HG4_Ill_250bpfermikitraw_21268:HG4_Ill_GATKHCSBGrefine_11059:HG4_Ill_GATKHC_25808;NumExactMatchSVs=6;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.327485;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=85;DistBack=19;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=227;REFWIDENED=16:83964324-83964550;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2084.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:22:0|1:23:1:2:20:./.:3:4:8:0:0/1:16:9:./.:.:.:.:.:.
chr16	85638411	HG2_PB_SVrefine2PB10Xhap12_11760	A	ATATATATATATAAAAATATAAAAGAAAGATCTCTGAGAGGGAAAGCCGGACAGGGTGCTGTCAGTATCTTTCTTTTTCATATATATATATATATATATATATATATATATATAATTTT	20	PASS	ClusterIDs=HG2_PB_HySA_29673:HG2_PB_PB10Xdip_12707:HG3_PB_HySA_24614:HG2_PB_SVrefine2Falcon2Bionano_7990:HG4_Ill_MetaSV_1906:HG4_PB_SVrefine2PBcRDovetail_8110:HG2_PB_SVrefine2PBcRplusDovetail_4079:HG2_PB_SVrefine2PB10Xhap12_11760:HG2_PB_SVrefine2Falcon1plusDovetail_4455:HG2_PB_assemblyticsfalcon_10053:HG3_PB_SVrefine2Falcon1Dovetail_10029:HG3_PB_SVrefine2PBcRDovetail_7845:HG4_PB_SVrefine2Falcon1Dovetail_10003:HG4_PB_assemblyticsfalcon_9852:HG2_PB_pbsv_16231:HG3_Ill_GATKHCSBGrefine_10647:HG4_PB_pbsv_16152:HG3_PB_pbsv_15890;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11760:HG2_PB_SVrefine2PBcRplusDovetail_4079;NumExactMatchSVs=2;ClusterMaxShiftDist=0.322581;ClusterMaxSizeDiff=0.322581;ClusterMaxEditDist=0.382775;PBcalls=16;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=118;DistBack=9;DistForward=22238;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=16:85638381-85638412;PctSeqSimilarity=0.9833;PctSizeSimilarity=0.9833;PctRecOverlap=0.9835;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2087.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:72:1/1:2:42:0:20:./.:0:1:1:0:./.:0:0:./.:.:.:.:.:.
chr16	85867678	HG2_PB_SVrefine2Falcon1plusDovetail_4457	A	AAGGGAGAGAAGGAGGGAGGGAGGAGGGAGGGGGAGGGAGGGAGAAGGAGGGAGGGAAGGAGGGAGGGGAAGGAGGGAGGGAAGGGAGGGAGGAAGGAGGAGGGAGGGGGAAGGAGGGAGAAGGGGAGGGAGGGAGGGAGGGAGGAAGGAGGGAGGGAAGGAGGGAGAGAAGGAGGGAGGGAGGAGGGAGGGAAGGAGGGAGGAAGGAGGAGAGAAGGAGGAAGAGGGAGGGAAGGAGGGAGGAAGGAGAAGGAGGGAGGAAGGAGAGAGAGGGGGAGGGAGGAAGGAGGAGGGAAGGAGGGAGGAAGGAGGGAAGGAGGGAGGAAGGAGGGAGGAGGGAGGGAAGGAGGAGAGGAGGGGAGGGAAGGAGGGAGGGAAGGAGGGAGAGAAGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAAGAGGGAGGGAAGGAGGGAGGAAGGAGGGAGGGAAGGAGGAGGGAGGAGAAGGAGGGAGGGAAGGAGGAGGGAGGGAGGAAGGAGCGAGGGAGAGGAGGGAGGAGGAGGGAGGGAGGAGGAGGGAGGGAAGGAGGGAAGGAGGGAGGAAGGAGGGAGGGAGGGAGGGAGGAGGGGAGGGAGAGAAGGAGGAGGGAAGGAGGAGGAAGGAGGGAGAGAAGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGGAGGGAAGGAGGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGAGGGAGGAGGGAATGAGAGGAGGGAGGAGGGAGGGAAGGAGGGAGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4457:HG2_PB_assemblyticsfalcon_10056;NumClusterSVs=2;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4457;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0164975;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.123096;PBcalls=2;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=787;DistBack=10753;DistForward=53;DistMin=53;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=342;REFWIDENED=16:85867679-85868020;PctSeqSimilarity=0.9375;PctSizeSimilarity=0.8706;PctRecOverlap=0.642;SizeDiff=-117;StartDistance=-265;EndDistance=-265;GTMatch=0;TruScore=81;MatchId=2088.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:20:./.:0:0:0:0:./.:0:0:0:0:./.:8:0:0/1:11:15:.:878:.
chr16	86057862	HG3_Ill_150bpfermikitraw_20455	T	TATATATATATATATATATATATATATATATATATATATATATATATGCATACATACACATAC	20	PASS	ClusterIDs=HG2_PB_pbsv_16239:HG2_PB_assemblyticsfalcon_10062:HG3_Ill_manta_3617:HG3_Ill_GATKHC_25748:HG3_Ill_GATKHCSBGrefine_10652:HG3_Ill_150bpfermikitraw_20455:HG2_Ill_GATKHC_25890:HG2_Ill_GATKHCSBGrefine_10704:HG2_Ill_250bpfermikitraw_21628:HG3_PB_pbsv_15899;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21628:HG2_Ill_GATKHCSBGrefine_10704:HG2_Ill_GATKHC_25890:HG3_Ill_150bpfermikitraw_20455:HG3_Ill_GATKHCSBGrefine_10652:HG3_Ill_GATKHC_25748:HG3_Ill_manta_3617;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0661157;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.225806;PBcalls=3;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=11;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=16:86057859-86057900;PctSeqSimilarity=0.9839;PctSizeSimilarity=0.9677;PctRecOverlap=0.9683;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2089.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:0|1:24:6:2:18:./.:10:17:0:6:0/1:18:29:./.:.:.:.:.:.
chr16	86142231	HG3_Ill_GATKHCSBGrefine_10654	T	TATTACCACTACTGCTACGACTACCATTACTACTACTGCCACCATTACTACTACCATTACTACTGCTGCTACTATTATCATTACTACTACTACTATGACTACTACTACCACC	20	PASS	ClusterIDs=HG2_PB_pbsv_16241:HG2_PB_assemblyticsfalcon_10065:HG3_PB_pbsv_15902:HG4_Ill_SVrefine2DISCOVARDovetail_11438:HG4_Ill_Krunchall_22295:HG4_Ill_GATKHC_25848:HG4_Ill_GATKHCSBGrefine_11069:HG3_Ill_GATKHC_25755:HG3_Ill_GATKHCSBGrefine_10654:HG2_PB_SVrefine2PBcRplusDovetail_4084:HG2_PB_SVrefine2PB10Xhap12_11767:HG2_PB_SVrefine2Falcon2Bionano_7995:HG2_PB_SVrefine2Falcon1plusDovetail_4462:HG2_Ill_GATKHC_25894:HG2_Ill_GATKHCSBGrefine_10706:HG2_PB_PB10Xdip_12727:HG4_PB_HySA_23725;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10706:HG2_Ill_GATKHC_25894:HG2_PB_SVrefine2Falcon1plusDovetail_4462:HG2_PB_SVrefine2Falcon2Bionano_7995:HG2_PB_SVrefine2PB10Xhap12_11767:HG2_PB_SVrefine2PBcRplusDovetail_4084:HG3_Ill_GATKHCSBGrefine_10654:HG3_Ill_GATKHC_25755:HG4_Ill_GATKHCSBGrefine_11069:HG4_Ill_GATKHC_25848:HG4_Ill_Krunchall_22295:HG4_Ill_SVrefine2DISCOVARDovetail_11438;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0865801;ClusterMaxSizeDiff=0.0779221;ClusterMaxEditDist=0.261603;PBcalls=9;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=111;DistBack=-1;DistForward=54;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=63;REFWIDENED=16:86142230-86142295;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2090.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:47:1/1:2:28:2:11:./.:97:249:93:211:0/1:4:26:./.:.:.:.:.:.
chr16	86312445	HG2_PB_SVrefine2PB10Xhap12_11772	G	AACCCCTTCTCCTTCACCCTCAGCGGCAAGTCCCGCTTTCCTGGGGCAGGGGCAGGTACCCCTCAACCCCTTCTCCTTCACCCTCAGCGGCAAGTCCCGCTTTCCTGGGGCAGGTACCCCTCAACCCCTTCTCCTTCACCCTCAGCGGCAAGTCCCGCTTTCCTGGGGCAGGGGCAGGTGCCCCTCA	20	PASS	ClusterIDs=HG2_PB_pbsv_16246:HG4_PB_assemblyticsfalcon_9866:HG4_PB_pbsv_16169:HG3_PB_SVrefine2Falcon1Dovetail_10038:HG4_PB_SVrefine2Falcon1Dovetail_10010:HG4_PB_SVrefine2PBcRDovetail_8118:HG3_PB_SVrefine2PBcRDovetail_7852:HG2_PB_assemblyticsfalcon_10069:HG2_PB_SVrefine2PBcRplusDovetail_4088:HG2_PB_SVrefine2PB10Xhap12_11772:HG2_PB_SVrefine2Falcon2Bionano_7998:HG2_PB_SVrefine2Falcon1plusDovetail_4466:HG2_Ill_SVrefine2DISCOVARplusDovetail_4878:HG3_PB_pbsv_15905:HG2_PB_PB10Xdip_12731:HG3_PB_HySA_24629;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4878:HG2_PB_SVrefine2Falcon1plusDovetail_4466:HG2_PB_SVrefine2Falcon2Bionano_7998:HG2_PB_SVrefine2PB10Xhap12_11772:HG2_PB_SVrefine2PBcRplusDovetail_4088:HG2_PB_assemblyticsfalcon_10069:HG3_PB_SVrefine2PBcRDovetail_7852:HG4_PB_SVrefine2PBcRDovetail_8118;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0746667;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.277487;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=186;DistBack=-1;DistForward=57;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=355;REFWIDENED=16:86312332-86312686;PctSeqSimilarity=0.9963;PctSizeSimilarity=1;PctRecOverlap=0.5668;SizeDiff=0;StartDistance=81;EndDistance=81;GTMatch=0;TruScore=85;MatchId=2091.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:1:18:1:14:./.:0:4:0:5:0/1:4:17:./.:.:.:.:.:.
chr16	86560363	HG2_PB_SVrefine2PB10Xhap12_11774	T	TTTTATCACTTTGGAGCGAGGCGGATCACGAGTCAGGAGATGAGACCATCTGGCTAACACGTGAAACCGTCTCTACTAAAAATACAAAAAATTAGCCGGCGTGATGGGGCCTGTATCCAGCTATCGGAGCTGAGGAGAATGCTGAACCTGAGCGGAGTTGCAGTGAGCCGAGATTGCGCACTGCACTCCCCTGGCACAGAGGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAACA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11267:HG3_PB_pbsv_15911:HG2_PB_HySA_29707:HG2_PB_HySA_29708:HG2_PB_SVrefine2PB10Xhap12_11774:HG3_Ill_MetaSV_1975:HG4_PB_pbsv_16177:HG2_PB_assemblyticsfalcon_10079:HG2_PB_SVrefine2Falcon1plusDovetail_4470;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11774;NumExactMatchSVs=1;ClusterMaxShiftDist=0.218182;ClusterMaxSizeDiff=0.218182;ClusterMaxEditDist=0.257827;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=244;DistBack=-1;DistForward=4;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=16:86560364-86560369;PctSeqSimilarity=0.9134;PctSizeSimilarity=0.8385;PctRecOverlap=0.8419;SizeDiff=-47;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=86;MatchId=2092.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:56:0|1:23:4:3:39:0|1:14:0:0:6:0/1:24:4:./.:.:.:.:.:.
chr16	86927308	HG3_Ill_GATKHCSBGrefine_10660	G	GCAGGTGAGCCCAGCCGCAGGTGAGCCCAGCTGCAGGGGAGGTTAGCAACAGGAGTAATGCCTGCCA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_21647:HG3_PB_HySA_24643:HG2_PB_HySA_29720:HG3_Ill_250bpfermikitraw_21039:HG3_Ill_150bpfermikitraw_20476:HG2_Ill_Krunchall_21980:HG3_PB_pbsv_15915:HG2_PB_assemblyticsfalcon_10088:HG4_PB_assemblyticsfalcon_9880:HG2_PB_pbsv_16258:HG3_Ill_GATKHC_25776:HG3_Ill_GATKHCSBGrefine_10660:HG2_Ill_GATKHCSBGrefine_10715;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21647:HG3_Ill_GATKHC_25776:HG3_Ill_GATKHCSBGrefine_10660:HG2_Ill_GATKHCSBGrefine_10715;NumExactMatchSVs=4;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.0882353;ClusterMaxEditDist=0.28169;PBcalls=6;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=-1;DistForward=14544;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=170;REFWIDENED=16:86927286-86927455;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2093.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:44:0|1:34:5:2:34:./.:14:0:2:2:0/1:24:10:./.:.:.:.:.:.
chr16	86964561	HG2_PB_pbsv_16259	T	TTTTCAATCCCTCTCCTGCCTCTTCTCCTCCCCCTCCCCTTTCTCCCTCCTCCTC	20	PASS	ClusterIDs=HG2_PB_pbsv_16259:HG4_Ill_GATKHC_25870:HG4_PB_HySA_23752;NumClusterSVs=3;ExactMatchIDs=HG2_PB_pbsv_16259;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.333333;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=17;DistForward=40;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=16:86964560-86964563;PctSeqSimilarity=0.9286;PctSizeSimilarity=1;PctRecOverlap=0.8545;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=92;MatchId=2094.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:0|1:22:2:3:29:./.:9:0:6:1:0/0:8:0:./.:.:.:.:.:.
chr16	87015699	HG2_Ill_250bpfermikitraw_21650	A	AAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	20	PASS	ClusterIDs=HG4_PB_pbsv_16184:HG4_Ill_GATKHC_25872:HG4_Ill_GATKHCSBGrefine_11075:HG4_Ill_250bpfermikitraw_21315:HG2_Ill_GATKHC_25919:HG2_Ill_GATKHCSBGrefine_10716:HG2_Ill_250bpfermikitraw_21650;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21650:HG2_Ill_GATKHCSBGrefine_10716:HG2_Ill_GATKHC_25919:HG4_Ill_250bpfermikitraw_21315:HG4_Ill_GATKHCSBGrefine_11075:HG4_Ill_GATKHC_25872;NumExactMatchSVs=6;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.142857;PBcalls=1;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=63;DistBack=3959;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=21;REFWIDENED=16:87015698-87015721;PctSeqSimilarity=0.9922;PctSizeSimilarity=0.9844;PctRecOverlap=0.9692;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2095.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:33:./.:7:26:9:3:./.:0:13:9:7:0/1:18:16:./.:.:.:.:.:.
chr16	87020478	HG2_PB_SVrefine2PB10Xhap12_11777	A	AGGTGCCCTCTGAAAAGAAGGTGATGTTTGCTGCTGTCAGAATCCAGGAGCCAGGTGGGCTGCTCGCACGGAGGCTGAATCTGTGGGCTCTGTCTTCTGGAGATCCGTGGGCTTGAATTTTTGAACTTGGTCTTTGCTGAGAAAGATGCCTGTTCCCGGGTCAGGGCCCTGGAGACTGCACACCCCTCTCCCCATGCTGGCCATTGCTGCAGCGAGCTCTGCCCTCACCAGCCTCGAGCTGTCCCCAGAGAAGCTGTGTCCCGAAGCCTGGGCAATACCTCGGCTGGGTCTGGATGCAGCCGGATTCCGGTGTCTGGAGCAGGGCCTTCCTCACTGGCCCCTACTCTGCGCAGCCTCTGCTTATCCTGCTGCCCCACAATAGCTCCTGGCAGGTCCTATTTACTGAGCACCCACTGTGTGCCAGGCACCTGTTGGCAGGACTCAGCTCCCTAGAATTTGCCTAACAGGTCTATTATGAGGCTACCATTCTTACACCCAATTTACAGATGGGAAAACAGAGAAACCCCATGAGGGAAGGGGCATCCTTTGCCACAGCACCCTGCCCTTGAGCTTCAGTACCCTCATCTGAAAAACAAGAATGAGAGCTGCCCCGCCTCTCTCCTGGCCAGCTGTGATCGGGGTCTGGTGTCTGCTGCTTGGACCCTTAGGGCCTTGACAAGGTCAAGCTAGGTAGTTCATAATGACCATCAAGTCATCGAGTGAGATGCTGTATTTCACAATGTTTTCTTTTTCTTTAAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCCACATCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTCCTTCCCAGCCTCAGCATGCACCAACATGCCTGGCTAAATATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCATCATGTTGGCCAGGCGGATCTCAAACTCTTGACCTCAAGTGATCTGCTCATCTCGGCCTCCCAAAGTTCTAGGATTACAGGTGTGAGCCACTGCGCCTGGCCTCACCGTGCTTTCTGAGGTGCCAGATGTTCTAGGGCCACACTTTCTGATAATTATTCCACACTCATGCTCCAAGACCTTCCGGTATTAACCCATTCAGTCTTCACCGCAACCCCATGACAGGGGGCATGCTCTCATCCTCACTGGACAGCAAAGAACACTGAGGGAGAGAGGGATTAAGTAACTCACTCAAGGTCACGTAGTAAAGGACATGGGAATTTGCATAGCAAGTCTATGAAGCAGGTATTATTTTTCTGCCCACTTTACAGATGGGAAAACTGAAGAGTCCAGGAGGGAACACTCTCTCCCGCATTACGGGCTGCCTGACACCACAGCTTGTAATAGCAGGCGCTGTCTCCACTGCTAGAGAAACTTGTAAGTGTGTGTGTTGTGGGGGGGGAGGGGGAGGAGGAGGGGAGGGGGAGGAGGAGGGGGGAGGAGGGGGAGGGGGAGGAGGGGCAGGAGGAGGAGCAGGGGGAGGGGGAGGGGGGGGGGAGGGGGAGGGGGGGGGGGGGGGGGGAGGGGGAGGGGGGGGAGGGGGGGGAGGGGGAGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGAGGGGGGGGGAGGGGGGGGGGAGGGGGGAGGGGGAGGGGGGAGGGGGGGGGGGGAGGGGGAGGGGGGGGAGGGGGGGGGGGGGGGAGGGGGGGGGGAGGGGGGGGGGGGGAGGGGGGGGGGGGGAGGGGAGGGGGGGGGAGGGGGGGGAGGGGGGGAGGGGAGGGGGAGGGAGGGGGCGGAGGGGGAGGGGGGGGGGGGGGGGGAGGGGAGGGAGGGGAGGGGAGGGGAGGGGGGGGGGGGGGAGGGGAGGGGGGGAGGGAGGGGGAGGGGAGGGGGGAGGGGAGGGGGGGGGGAGGGGAGGGGGAGGGGGGGGGGAGGGGAGGGGGAGGGGAGGGGGGAGGGGGGGAGGGGAGGGGAGGGGGGAGGGGAGGGGGAGGGGGGGGGAGGGGGAGGGATGGGGGAGGGGAGGGGAGGGAGGGGGGGGAGGGGAGGGGAGGGGGGGGAGGGGAGGGGAGGGAGGGGAG	10	PASS	ClusterIDs=HG2_PB_pbsv_16261:HG2_PB_SVrefine2PB10Xhap12_11778:HG2_PB_PB10Xdip_12738:HG3_PB_SVrefine2Falcon1Dovetail_10045:HG4_PB_SVrefine2Falcon1Dovetail_10016:HG2_PB_SVrefine2PB10Xhap12_11777:HG2_PB_SVrefine2PBcRplusDovetail_4091:HG2_PB_SVrefine2Falcon2Bionano_8003:HG2_PB_SVrefine2Falcon1plusDovetail_4472;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11777;NumExactMatchSVs=1;ClusterMaxShiftDist=0.166418;ClusterMaxSizeDiff=0.166418;ClusterMaxEditDist=0.249626;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2090;DistBack=4752;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=16:87020479-87020480;PctSeqSimilarity=0.9755;PctSizeSimilarity=0.9689;PctRecOverlap=0.9694;SizeDiff=-67;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=97;MatchId=2096.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:1/1:0:20:0:20:./.:0:5:0:2:1/1:0:19:1/1:7:156:.:2146:.
chr16	87178716	HG2_PB_SVrefine2PBcRplusDovetail_4093	A	AGGCAGGGGTGAGAAGCTGCTCACATTCTCAGTTTCAATCACAGGCAGGGGTGAGGAGCTACTGGCATTAGCTCCAGTCACGGGCAGGGGTGAGGTGCTGCTCACACTATCAGTTTCAATCACAGGCAGGGGTGAGGAGCTACTGGCATTAGCTCCAGTCACGGGCAGAGGTGAGGAGCTGCTCACATTCTCAGTTTCAATCACAGGCAGGGGTGAGGAGCTACTGGCATTAGCTCCAGTCACGGGCAGGGGTGAGGAGCTGCTCACTTTATCAGTTTCAATCACAGGCAGGGGTGAGGAGCCACTGGCATTAGCTCCAATCACAGGCAGGGGTGAGAAGCTGCTCACATTCTCAGTTTCAATCACAGGCAGGGGTGAGGAGCTACTGGCATTAGCTCCAGTCACGGGCAGAGGTGAGGAGCTGCTCACATTCTCAGTTTCAATCACAGGCAAGGGTGAGGAGCTACTGGCATTAGCTCCAGTCACGGGCAGGGGTGAGGAGCTGCTCACTTTATCAGTTTCAATCACAGGCAGGGGTGAGGAGCCACTGGCATTAGCTCCAATCACAGGCAGGGGTGAGAAGCTGCTCACATTCTCAGTTTCAATCACAGGCAGGGGTGAGGAGCTACTGGCATTAGCTCCAGTCACGGGCAGGGGTGAGGAGCTGCTCACTTTATCAGTTTCAATCACAGGCAGGGGTGAGGAGCCACTGGCATTAGCTCCAATCACAGGCAGGGGTGAGAAGCTGCTCACATTCTCAGTTTCAATCACAGGCAGGGGTGAGGAGCTACTGGCATTAGCTCCAGTCACG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11780:HG2_PB_pbsv_16263:HG4_PB_assemblyticsfalcon_9881:HG3_PB_SVrefine2Falcon1Dovetail_10046:HG4_PB_SVrefine2Falcon1Dovetail_10017:HG3_PB_SVrefine2PBcRDovetail_7856:HG2_PB_SVrefine2PBcRplusDovetail_4093:HG2_PB_SVrefine2Falcon2Bionano_8004:HG2_PB_SVrefine2Falcon1plusDovetail_4474;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4474:HG2_PB_SVrefine2Falcon2Bionano_8004:HG2_PB_SVrefine2PBcRplusDovetail_4093:HG3_PB_SVrefine2PBcRDovetail_7856;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0329268;ClusterMaxSizeDiff=0.0268293;ClusterMaxEditDist=0.146252;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=810;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=16:87178717-87179014;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2097.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:22:71:0|1:20:1:1:36:0|1:16:0:0:20:0/1:32:21:0/1:19:24:.:.:.
chr16	87337911	HG4_Ill_GATKHC_25879	T	TGCCCATCCTTTAAGGCTGGGATGCAGGTGTGGGCCACCACACCCGGCCTCGCCCATCCTTTAAGGCTGGGATCCAGCTGTGGGCCACTGTGCCCGGCCTC	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_11454:HG2_PB_assemblyticsfalcon_10097:HG4_PB_pbsv_16189:HG4_PB_HySA_23759:HG2_PB_pbsv_16266:HG4_Ill_svaba_20190:HG4_Ill_Krunchall_22321:HG4_Ill_GATKHC_25879:HG4_Ill_GATKHCSBGrefine_11078:HG4_Ill_250bpfermikitraw_21323:HG2_PB_SVrefine2Falcon1plusDovetail_4476:HG2_Ill_svaba_20222:HG2_Ill_GATKHC_25930:HG2_Ill_GATKHCSBGrefine_10721:HG2_Ill_250bpfermikitraw_21661:HG2_Ill_150bpfermikitraw_20419;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20419:HG2_Ill_250bpfermikitraw_21661:HG2_Ill_GATKHCSBGrefine_10721:HG2_Ill_GATKHC_25930:HG2_Ill_svaba_20222:HG2_PB_SVrefine2Falcon1plusDovetail_4476:HG4_Ill_250bpfermikitraw_21323:HG4_Ill_GATKHCSBGrefine_11078:HG4_Ill_GATKHC_25879:HG4_Ill_Krunchall_22321:HG4_Ill_svaba_20190;NumExactMatchSVs=11;ClusterMaxShiftDist=0.13198;ClusterMaxSizeDiff=0.13198;ClusterMaxEditDist=0.25641;PBcalls=5;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=100;DistBack=26792;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=147;REFWIDENED=16:87337881-87338027;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2099.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:25:0|1:36:3:3:21:./.:2:22:16:3:0/1:26:22:./.:.:.:.:.:.
chr16	87772138	HG2_PB_SVrefine2Falcon2Bionano_8011	G	GTCCATCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACAGCACCTCATCCATCCACACACCAGCATCTCATCCATCCACACACCAGCATCTCATCCATCCACACACCAGCACCTCATCCATCCGCACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCTCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4482:HG4_PB_pbsv_16195:HG2_PB_pbsv_16278:HG3_PB_SVrefine2Falcon1Dovetail_10056:HG4_PB_SVrefine2Falcon1Dovetail_10025:HG2_PB_SVrefine2PB10Xhap12_11788:HG2_PB_SVrefine2PBcRplusDovetail_4099:HG2_PB_SVrefine2Falcon2Bionano_8011;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8011:HG2_PB_SVrefine2PBcRplusDovetail_4099;NumExactMatchSVs=2;ClusterMaxShiftDist=0.287857;ClusterMaxSizeDiff=0.287857;ClusterMaxEditDist=0.347956;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=912;DistBack=3531;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1140;REFWIDENED=16:87772139-87773278;PctSeqSimilarity=0.9881;PctSizeSimilarity=0.9881;PctRecOverlap=0.4854;SizeDiff=-11;StartDistance=-470;EndDistance=-470;GTMatch=1;TruScore=82;MatchId=2100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:91:1/1:0:21:1:30:1/1:3:61:2:73:./.:2:1:0/1:8:32:.:1087:.
chr16	88383467	HG2_Ill_manta_4436	A	ACACCATGCACAATACACACCACACACAAGTGCACACACACCAGGCACAATACACACCACTCACAAATGCACATGTACACCCTACACAGACCACACATCACATACTACACACACACCACACTACACACAAACACACACTGCACAATACACACCACACACTATACACACCTTACACCCCACACACGCAAGTGCACACACATGACACTACACACAAATACGTGCTGCACAGTACATACCACACACTACACACACCACACATACACATTACATACTAACATGCACTGCACACTACACACCACACACCACACACCATACACTAAACACACACCACACACCACACACACTTCACACACTAGACACAAATATG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10038:HG4_PB_HySA_23825:HG2_PB_pbsv_16299:HG3_PB_pbsv_15950:HG4_PB_pbsv_16215:HG2_PB_PB10Xdip_12774:HG2_Ill_breakscan11_4693:HG4_PB_SVrefine2PBcRDovetail_8132:HG4_Ill_SVrefine2DISCOVARDovetail_11471:HG4_Ill_MetaSV_1916:HG4_Ill_GATKHCSBGrefine_11091:HG3_PB_SVrefine2PBcRDovetail_7871:HG3_Ill_SVrefine2DISCOVARDovetail_11674:HG3_Ill_GATKHCSBGrefine_10679:HG2_PB_SVrefine2PBcRplusDovetail_4111:HG2_PB_SVrefine2PB10Xhap12_11802:HG2_PB_SVrefine2Falcon2Bionano_8021:HG2_PB_SVrefine2Falcon1plusDovetail_4490:HG2_Ill_manta_4436:HG2_Ill_SVrefine2DISCOVARplusDovetail_4901:HG2_Ill_MetaSV_1854:HG2_Ill_GATKHCSBGrefine_10730:HG2_10X_SVrefine210Xhap12_11294:HG3_PB_SVrefine2Falcon1Dovetail_10066;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11294:HG2_Ill_GATKHCSBGrefine_10730:HG2_Ill_MetaSV_1854:HG2_Ill_SVrefine2DISCOVARplusDovetail_4901:HG2_Ill_manta_4436:HG2_PB_SVrefine2Falcon1plusDovetail_4490:HG2_PB_SVrefine2Falcon2Bionano_8021:HG2_PB_SVrefine2PB10Xhap12_11802:HG2_PB_SVrefine2PBcRplusDovetail_4111:HG3_Ill_GATKHCSBGrefine_10679:HG3_Ill_SVrefine2DISCOVARDovetail_11674:HG3_PB_SVrefine2PBcRDovetail_7871:HG4_Ill_GATKHCSBGrefine_11091:HG4_Ill_MetaSV_1916:HG4_Ill_SVrefine2DISCOVARDovetail_11471:HG4_PB_SVrefine2PBcRDovetail_8132;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0766182;ClusterMaxSizeDiff=0.0766182;ClusterMaxEditDist=0.196636;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=366;DistBack=38;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=61;REFWIDENED=16:88383468-88383528;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:1/1:1:26:1:30:./.:7:97:0:59:1/1:0:17:1/1:1:70:.:.:.
chr16	88478399	HG2_PB_SVrefine2PBcRplusDovetail_4112	T	TGCTGGCTGTGGACGGCCGGGGTGAGGGGCCACCACCCTCTTCCCCCTGGGAGGGGAGGCCAAAGGCTCTGGGAAGGAGCTGGGGGCCACTGCCCTGCTG	20	PASS	ClusterIDs=HG4_PB_pbsv_16217:HG4_PB_SVrefine2PBcRDovetail_8133:HG4_PB_SVrefine2Falcon1Dovetail_10039:HG4_Ill_svaba_20230:HG4_Ill_manta_3765:HG4_Ill_SVrefine2DISCOVARDovetail_11472:HG4_Ill_Krunchall_22350:HG4_Ill_GATKHCSBGrefine_11092:HG4_Ill_Cortex_1346:HG4_Ill_250bpfermikitraw_21352:HG4_Ill_150bpfermikitraw_20564:HG3_PB_SVrefine2PBcRDovetail_7872:HG3_PB_SVrefine2Falcon1Dovetail_10067:HG3_Ill_svaba_20450:HG3_Ill_manta_3624:HG3_Ill_Spiral_16813:HG3_Ill_SVrefine2DISCOVARDovetail_11675:HG3_Ill_Krunchall_21619:HG3_Ill_GATKHCSBGrefine_10680:HG3_Ill_Cortex_1409:HG3_Ill_250bpfermikitraw_21077:HG3_Ill_150bpfermikitraw_20506:HG2_PB_SVrefine2PBcRplusDovetail_4112:HG2_PB_SVrefine2PB10Xhap12_11803:HG2_PB_SVrefine2Falcon2Bionano_8022:HG2_PB_SVrefine2Falcon1plusDovetail_4492:HG2_Ill_svaba_20268:HG2_Ill_manta_4437:HG2_Ill_SpiralSDKrefine_6407:HG2_Ill_SVrefine2DISCOVARplusDovetail_4902:HG2_Ill_Krunchall_22025:HG2_Ill_GATKHCSBGrefine_10735:HG2_Ill_Cortex_3305:HG2_Ill_250bpfermikitraw_21702:HG2_Ill_150bpfermikitraw_20448:HG2_10X_SVrefine210Xhap12_11296:HG2_PB_PB10Xdip_12778:HG2_Ill_breakscan11_4694:HG2_PB_HySA_29817:HG2_PB_pbsv_16302:HG3_PB_pbsv_15951:HG4_PB_assemblyticsfalcon_9922:HG3_PB_assemblyticsfalcon_10111:HG2_PB_assemblyticsfalcon_10134;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11296:HG2_Ill_150bpfermikitraw_20448:HG2_Ill_250bpfermikitraw_21702:HG2_Ill_Cortex_3305:HG2_Ill_GATKHCSBGrefine_10735:HG2_Ill_Krunchall_22025:HG2_Ill_SVrefine2DISCOVARplusDovetail_4902:HG2_Ill_SpiralSDKrefine_6407:HG2_Ill_manta_4437:HG2_Ill_svaba_20268:HG2_PB_SVrefine2Falcon1plusDovetail_4492:HG2_PB_SVrefine2Falcon2Bionano_8022:HG2_PB_SVrefine2PB10Xhap12_11803:HG2_PB_SVrefine2PBcRplusDovetail_4112:HG3_Ill_150bpfermikitraw_20506:HG3_Ill_250bpfermikitraw_21077:HG3_Ill_Cortex_1409:HG3_Ill_GATKHCSBGrefine_10680:HG3_Ill_Krunchall_21619:HG3_Ill_SVrefine2DISCOVARDovetail_11675:HG3_Ill_Spiral_16813:HG3_Ill_manta_3624:HG3_Ill_svaba_20450:HG3_PB_SVrefine2Falcon1Dovetail_10067:HG3_PB_SVrefine2PBcRDovetail_7872:HG4_Ill_150bpfermikitraw_20564:HG4_Ill_250bpfermikitraw_21352:HG4_Ill_Cortex_1346:HG4_Ill_GATKHCSBGrefine_11092:HG4_Ill_Krunchall_22350:HG4_Ill_SVrefine2DISCOVARDovetail_11472:HG4_Ill_manta_3765:HG4_Ill_svaba_20230;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0707071;ClusterMaxSizeDiff=0.040404;ClusterMaxEditDist=0.251256;PBcalls=16;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=99;DistBack=-1;DistForward=11112;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=16:88478400-88478400;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2102.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:1:27:1:25:1/1:0:22:0:16:1/1:0:38:./.:.:.:.:.:.
chr16	88712733	HG4_Ill_GATKHCSBGrefine_11096	C	CGGACCGGGGCTGCAAAGTCTCAGCACAAGGCAGACCCAGGGGACGTGCGT	20	PASS	ClusterIDs=HG2_CG_vcfBeta_9254:HG4_PB_HySA_23841:HG2_PB_pbsv_16311:HG2_PB_HySA_29837:HG4_PB_pbsv_16226:HG4_Ill_svaba_20243:HG4_Ill_Krunchall_22359:HG4_Ill_GATKHC_25931:HG4_Ill_GATKHCSBGrefine_11096:HG4_Ill_Cortex_1348:HG4_Ill_250bpfermikitraw_21362:HG4_Ill_150bpfermikitraw_20573:HG2_Ill_svaba_20280:HG2_Ill_SpiralSDKrefine_6412:HG2_Ill_Krunchall_22033:HG2_Ill_GATKHC_25988:HG2_Ill_GATKHCSBGrefine_10742:HG2_Ill_Cortex_3308:HG2_Ill_250bpfermikitraw_21711;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21711:HG2_Ill_Cortex_3308:HG2_Ill_GATKHCSBGrefine_10742:HG2_Ill_GATKHC_25988:HG2_Ill_Krunchall_22033:HG2_Ill_SpiralSDKrefine_6412:HG2_Ill_svaba_20280:HG4_Ill_150bpfermikitraw_20573:HG4_Ill_250bpfermikitraw_21362:HG4_Ill_Cortex_1348:HG4_Ill_GATKHCSBGrefine_11096:HG4_Ill_GATKHC_25931:HG4_Ill_Krunchall_22359:HG4_Ill_svaba_20243;NumExactMatchSVs=14;ClusterMaxShiftDist=0.265306;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.383838;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=1;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=50;DistBack=12894;DistForward=14679;DistMin=12894;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=32;REFWIDENED=16:88712713-88712744;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2104.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:16:0|1:16:0:1:13:0|1:10:0:1:12:0/1:23:12:./.:.:.:.:.:.
chr16	88898317	HG4_PB_assemblyticsfalcon_9950	G	GGGGAGGACGCGGTGAGGCCGACACGGGTGCGTGGGGAGGAGAGCGGTGAGGCCGAGCACGGGGAGCGTGGGGAGGAGGTGGTGAGGCTGAGCATGGGGTGCGTGGAGGCTGAGCACAGGGTGCGTGGGGAGGAGAGCGGTGAGGATGAGCACGGGGTGCAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4503:HG4_PB_assemblyticsfalcon_9950:HG4_PB_SVrefine2Falcon1Dovetail_10051:HG4_PB_pbsv_16236:HG3_PB_SVrefine2Falcon1Dovetail_10079:HG2_PB_assemblyticsfalcon_10161;NumClusterSVs=6;ExactMatchIDs=HG4_PB_assemblyticsfalcon_9950;NumExactMatchSVs=1;ClusterMaxShiftDist=0.127168;ClusterMaxSizeDiff=0.127168;ClusterMaxEditDist=0.225434;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=161;DistBack=146;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=707;REFWIDENED=16:88897614-88898320;PctSeqSimilarity=0.9575;PctSizeSimilarity=0.8944;PctRecOverlap=0.0718;SizeDiff=-19;StartDistance=158;EndDistance=158;GTMatch=0;TruScore=64;MatchId=2107.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:24:./.:3:3:4:2:./.:2:0:1:0:0/0:11:0:./.:.:.:.:.:.
chr16	88954991	HG2_PB_SVrefine2Falcon1plusDovetail_4505	TG	CTACTCCCTGGGTGGGGTGGAGGAGGGTTGGGGTGGGAAGGGTGTGTGGGGCTGGGAGGGTTGGGGTGGGTGGGGGAGTTGGGGTGGGTGGAGGGTGGGGTGGTGGGGAAGGGTGTGGGTGGGCTGGGGAGGGTTGGGTGGGGGAAGGGTGTGTGTGGGGCTGGGGAGGGGTGGGTAGGGTGGGAAGGGTGCGGGTGGGTTGGGGAGGGGTGGGTGGAGTGGGGGAAGGGTATGGGTGGGGCTGGGGAGGGGTGGGTGGGTGGGAGGGGAGGGGTGGGTGGAGTGGGGGCTACTCCCTGGGTGGGGTGGAGGAGGGGTGGGGTGGGGGAAGGGTGCAGGTGGTGGTGGAGGAGGGGTGGGGAGGGAGGGATGGGGTGGGGAAGGGTGTGGGTGGGGAGGTGGGGTGGGGTGGGAGGGTGGGGTGGAGTGGGGCTACTCCCTGGTGGGGTGGGGGAGGGTGGGGTGGGGGAAGGGTGCAGGTGGGGTGGGGAAGGGTGTGGGTGGGTGGGGTGGAGGGGTGGGGTGGGAGGGGTGGGTGGGGAGGGGTGGGGTGGGAGGGGTGGGGTGGGTGGGAGGGGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11817:HG2_PB_assemblyticsfalcon_10166:HG2_PB_SVrefine2Falcon1plusDovetail_4505:HG3_PB_SVrefine2Falcon1Dovetail_10082:HG3_PB_HySA_24731:HG2_PB_PB10Xdip_12810:HG3_PB_pbsv_15963:HG2_PB_pbsv_16324:HG4_PB_pbsv_16238:HG4_PB_SVrefine2Falcon1Dovetail_10054:HG4_PB_SVrefine2Falcon1Dovetail_10053:HG3_PB_SVrefine2PBcRDovetail_7879:HG3_PB_SVrefine2Falcon1Dovetail_10081:HG2_PB_SVrefine2Falcon2Bionano_8032;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4505:HG2_PB_assemblyticsfalcon_10166;NumExactMatchSVs=2;ClusterMaxShiftDist=0.140962;ClusterMaxSizeDiff=0.139303;ClusterMaxEditDist=0.209171;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=577;DistBack=4;DistForward=1098;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=16:88954993-88954990;PctSeqSimilarity=0.9407;PctSizeSimilarity=0.8904;PctRecOverlap=0.8906;SizeDiff=-71;StartDistance=26;EndDistance=27;GTMatch=0;TruScore=90;MatchId=2108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:35:./.:0:3:1:3:./.:3:1:1:0:./.:3:0:1/1:1:16:.:1300:.
chr16	88960553	HG2_PB_SVrefine2PBcRplusDovetail_4123	T	TTACACACATGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATGTACACACATGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATGTACACACATGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATGTACACACATGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATGTACACGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATGTACACACATGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATGTACACACATGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATGTACACACATGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATGTACACACATGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATGTACACACATGCACGCACACATGCACACACACATGCATACATATACACATGCACACAATG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4506:HG2_PB_pbsv_16326:HG4_PB_SVrefine2Falcon1Dovetail_10055:HG2_PB_pbsv_16325:HG2_PB_SVrefine2Falcon2Bionano_8033:HG4_PB_pbsv_16239:HG2_PB_SVrefine2PBcRplusDovetail_4123:HG3_PB_pbsv_15964:HG2_PB_SVrefine2PB10Xhap12_11818;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4506:HG2_PB_SVrefine2PBcRplusDovetail_4123:HG2_PB_SVrefine2PB10Xhap12_11818;NumExactMatchSVs=3;ClusterMaxShiftDist=0.143802;ClusterMaxSizeDiff=0.138843;ClusterMaxEditDist=0.267606;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=586;DistBack=948;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=485;REFWIDENED=16:88960554-88961038;PctSeqSimilarity=0.99;PctSizeSimilarity=0.9734;PctRecOverlap=0.4743;SizeDiff=-16;StartDistance=-309;EndDistance=-309;GTMatch=0;TruScore=81;MatchId=2109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:49:1/1:1:4:0:7:./.:0:0:1:0:./.:0:3:1/1:0:20:.:1300:.
chr16	89073363	HG3_PB_HySA_24740	C	CCATCCATCTCCTCCCCACTCCCCTCCCTCCCCCTGCATCTCCTCACTCCCCTCCCTCCTTCGCCCTCTCCTCCTCACTCCCTTCTTCTCCCCACTCCCCTCTTCTCCCTCCATCTCCTTTCCACTCCCCTCCCCCTCCACCCTCTCGCCACTCCCCTCCTGCCCATCCATCTCCTTCCTCCCCTCCTCTCCATCTCCTCCCCACTCTCCTCCCTACCCCTCCATCTCCTTCCTCACTCCCCTCCCTCCTTTGCTGTCTCCTCCCCTCCCTCTCTCCCTCTTCTCTCTTCATCTCTCCCCACTCCCTCCCTCCCTCTCCATCTCCTCCCCACTCCCCTCCATCTCCTCCTCACTCCCCTCCATCTCCTCCTCACTCCCTCCATCTCCTCCTCACTCCTCTCCCTCCTTGGCCTCTCCTCCCCACTCCCCTCTTCTCCCTCCATCTCCCTCCTCACTCCCTCCATCTCCTCCTCACTCCCTCCCTCCTTCGCCCTCTCCTCCCCACTCCCTTCTTCTCCCTCCATTTCCTCCTCACTCCGCTCCATCTCCTCCTTACTCCCCTCCCTCCTTCGCCCTCTCCTCCCCACTCCCCTCTTCTCCCTCCATCTCCTCCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10065:HG2_PB_PB10Xdip_12818:HG2_PB_pbsv_16335:HG2_PB_HySA_29882:HG3_PB_HySA_24740:HG3_PB_pbsv_15971:HG2_PB_SVrefine2PB10Xhap12_11822:HG3_PB_SVrefine2Falcon1Dovetail_10090:HG4_PB_SVrefine2Falcon1Dovetail_10066:HG2_PB_SVrefine2Falcon2Bionano_8036:HG2_PB_SVrefine2Falcon1plusDovetail_4511:HG2_PB_SVrefine2PBcRplusDovetail_4127:HG3_PB_SVrefine2Falcon1Dovetail_10089;NumClusterSVs=13;ExactMatchIDs=HG3_PB_HySA_24740;NumExactMatchSVs=1;ClusterMaxShiftDist=0.150427;ClusterMaxSizeDiff=0.150427;ClusterMaxEditDist=0.310345;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=613;DistBack=5;DistForward=195;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=616;REFWIDENED=16:89073087-89073702;PctSeqSimilarity=0.9845;PctSizeSimilarity=0.9935;PctRecOverlap=0.9935;SizeDiff=4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:43:./.:0:0:0:0:./.:0:0:0:0:./.:0:0:1/1:0:63:.:2047:.
chr16	89158131	HG2_Ill_GATKHCSBGrefine_10754	A	AGCCCTTCGTCTGCTAATGTCCATGAGTTTACCATGCTGGGTGCTCTGTGGCCCTTCGTTCTGCTAACGTCCAGGAATTCACCATGCTGGGCACTCTGCG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11318:HG3_PB_pbsv_15978:HG4_PB_HySA_23880:HG2_PB_pbsv_16340:HG2_PB_HySA_29885:HG4_PB_SVrefine2Falcon1Dovetail_10073:HG4_PB_assemblyticsfalcon_9979:HG3_PB_HySA_24752:HG2_PB_PB10Xdip_12825:HG4_Ill_svaba_20269:HG4_Ill_manta_3769:HG4_Ill_Krunchall_22376:HG4_Ill_GATKHCSBGrefine_11103:HG4_Ill_Cortex_1354:HG4_Ill_250bpfermikitraw_21384:HG4_Ill_150bpfermikitraw_20595:HG3_Ill_svaba_20483:HG3_Ill_manta_3626:HG3_Ill_Krunchall_21638:HG3_Ill_GATKHCSBGrefine_10694:HG3_Ill_Cortex_1413:HG3_Ill_250bpfermikitraw_21102:HG3_Ill_150bpfermikitraw_20533:HG2_Ill_svaba_20299:HG2_Ill_manta_4438:HG2_Ill_SpiralSDKrefine_6423:HG2_Ill_Krunchall_22047:HG2_Ill_GATKHCSBGrefine_10754:HG2_Ill_Cortex_3311:HG2_Ill_250bpfermikitraw_21726:HG2_Ill_150bpfermikitraw_20471:HG2_Ill_breakscan11_4696:HG4_PB_pbsv_16258:HG3_Ill_SVrefine2DISCOVARDovetail_11685:HG2_PB_SVrefine2PBcRplusDovetail_4132:HG2_PB_SVrefine2PB10Xhap12_11827:HG2_PB_SVrefine2Falcon2Bionano_8041:HG2_PB_SVrefine2Falcon1plusDovetail_4516:HG2_Ill_SVrefine2DISCOVARplusDovetail_4914;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20471:HG2_Ill_250bpfermikitraw_21726:HG2_Ill_Cortex_3311:HG2_Ill_GATKHCSBGrefine_10754:HG2_Ill_Krunchall_22047:HG2_Ill_SpiralSDKrefine_6423:HG2_Ill_manta_4438:HG2_Ill_svaba_20299:HG3_Ill_150bpfermikitraw_20533:HG3_Ill_250bpfermikitraw_21102:HG3_Ill_Cortex_1413:HG3_Ill_GATKHCSBGrefine_10694:HG3_Ill_Krunchall_21638:HG3_Ill_manta_3626:HG3_Ill_svaba_20483:HG4_Ill_150bpfermikitraw_20595:HG4_Ill_250bpfermikitraw_21384:HG4_Ill_Cortex_1354:HG4_Ill_GATKHCSBGrefine_11103:HG4_Ill_Krunchall_22376:HG4_Ill_manta_3769:HG4_Ill_svaba_20269;NumExactMatchSVs=22;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.227488;PBcalls=13;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=99;DistBack=2861;DistForward=33;DistMin=33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=16:89158126-89158163;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:53:1/1:1:15:1:13:./.:0:17:1:17:1/1:1:35:./.:.:.:.:.:.
chr16	89281684	HG3_Ill_GATKHCSBGrefine_10698	G	GAACATGAAAAGATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTCGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4697:HG2_PB_pbsv_16351:HG2_PB_HySA_29890:HG2_PB_PB10Xdip_12831:HG3_Ill_MetaSV_1988:HG3_Ill_GATKHCSBGrefine_10698:HG2_PB_SVrefine2PB10Xhap12_11833:HG2_PB_SVrefine2PBcRplusDovetail_4137:HG3_PB_pbsv_15990;NumClusterSVs=9;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_10698:HG3_Ill_MetaSV_1988;NumExactMatchSVs=2;ClusterMaxShiftDist=0.171329;ClusterMaxSizeDiff=0.167832;ClusterMaxEditDist=0.206294;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=298;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=16:89281685-89281698;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9967;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2114.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:27:1|0:4:20:13:4:./.:17:0:2:11:0/1:37:13:./.:.:.:.:.:.
chr16	89408479	HG3_Ill_250bpfermikitraw_21117	T	TCCTCCACGAACAGCGGCCACAGCCCACGGCGGGAGTGCTGCACCTCCTCCACGAACAGCAGCCACGGCCCATGGCAGGAGTGCTGCA	20	PASS	ClusterIDs=HG4_PB_pbsv_16274:HG2_PB_PB10Xdip_12833:HG3_Ill_GATKHC_25873:HG4_Ill_150bpfermikitraw_20609:HG3_PB_pbsv_15998:HG3_Ill_250bpfermikitraw_21117:HG2_PB_HySA_29896:HG3_PB_HySA_24773;NumClusterSVs=8;ExactMatchIDs=HG3_Ill_250bpfermikitraw_21117:HG4_Ill_150bpfermikitraw_20609;NumExactMatchSVs=2;ClusterMaxShiftDist=0.194286;ClusterMaxSizeDiff=0.194286;ClusterMaxEditDist=0.262857;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=87;DistBack=0;DistForward=4;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=257;REFWIDENED=16:89408225-89408481;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:40:./.:12:4:4:30:0|1:18:0:0:23:0/1:23:10:./.:.:.:.:.:.
chr16	89456497	HG2_PB_SVrefine2PBcRplusDovetail_4138	AGAC	CGAGAGAGAAGATCACTGGGGCGAACACCGAGTGTGGCGGAGAGCACCGAGAGAGAAGATCACTGGGGCGAACACCGAGTGTGGCGGGGAGCACCGAG	10	PASS	ClusterIDs=HG4_PB_pbsv_16275:HG2_PB_HySA_29897:HG2_PB_pbsv_16355:HG4_PB_HySA_23899:HG4_PB_SVrefine2Falcon1Dovetail_10080:HG3_PB_SVrefine2Falcon1Dovetail_10106:HG2_PB_SVrefine2PBcRplusDovetail_4138:HG2_PB_SVrefine2PB10Xhap12_11835:HG2_PB_SVrefine2Falcon2Bionano_8046:HG2_PB_SVrefine2Falcon1plusDovetail_4523:HG2_PB_PB10Xdip_12834:HG3_PB_SVrefine2PBcRDovetail_7886:HG3_PB_HySA_24774;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_12834:HG2_PB_SVrefine2Falcon1plusDovetail_4523:HG2_PB_SVrefine2Falcon2Bionano_8046:HG2_PB_SVrefine2PB10Xhap12_11835:HG2_PB_SVrefine2PBcRplusDovetail_4138:HG3_PB_SVrefine2Falcon1Dovetail_10106:HG4_PB_SVrefine2Falcon1Dovetail_10080;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0416667;ClusterMaxEditDist=0.3125;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=94;DistBack=-10066;DistForward=25;DistMin=-10066;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=725;REFWIDENED=16:89456095-89456819;PctSeqSimilarity=0.99;PctSizeSimilarity=0.9792;PctRecOverlap=0.9694;SizeDiff=-2;StartDistance=1;EndDistance=4;GTMatch=0;TruScore=97;MatchId=2117.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:71:1/1:1:13:2:37:./.:1:2:0:3:./.:0:2:./.:.:.:.:.:.
chr16	89910099	HG2_PB_SVrefine2Falcon2Bionano_8059	G	TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTTTGTTGCCCAGGCTGGAATGCAGTGGCGTGATCTAGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCTGGAGTAGCTGGGATTACAGGCACCTGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCGCCATGTTGGCCAGGATGGTCTCACTCTCAGGACCTTTTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATCAGTCACTGTGCCTGGCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4538:HG4_PB_pbsv_16298:HG2_PB_PB10Xdip_12869:HG2_PB_pbsv_16379:HG2_10X_SVrefine210Xhap12_11345:HG3_PB_pbsv_16025:HG4_PB_HySA_23933:HG3_PB_HySA_24800:HG2_PB_HySA_29934:HG2_PB_HySA_29933:HG3_PB_SVrefine2PBcRDovetail_7898:HG3_PB_SVrefine2Falcon1Dovetail_10127:HG4_PB_SVrefine2PBcRDovetail_8159:HG2_PB_SVrefine2Falcon2Bionano_8059:HG2_Ill_SVrefine2DISCOVARplusDovetail_4927:HG2_PB_SVrefine2PBcRplusDovetail_4153:HG2_PB_SVrefine2PB10Xhap12_11854:HG4_PB_SVrefine2Falcon1Dovetail_10100;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4927:HG2_PB_SVrefine2Falcon2Bionano_8059:HG4_PB_SVrefine2PBcRDovetail_8159;NumExactMatchSVs=3;ClusterMaxShiftDist=0.10356;ClusterMaxSizeDiff=0.0906149;ClusterMaxEditDist=0.256494;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=305;DistBack=8849;DistForward=67;DistMin=67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=416;REFWIDENED=16:89910100-89910515;PctSeqSimilarity=0.984;PctSizeSimilarity=0.9967;PctRecOverlap=0.772;SizeDiff=-1;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=91;MatchId=2119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:43:1/1:1:23:3:12:./.:0:1:0:4:./.:0:1:0/1:5:44:.:.:.
chr16	89975096	HG2_PB_PB10Xdip_12873	A	ACCTCCTCCTCCCAGCTCCCACCTCCCTCCTCCCACCTCCCAGTTCCCGCCTCCCACCTCTCACCTCCCACCTCCCTCCTCCCAGTTCCCAGCTCCCAGCTCCCACCTCCCAGCTCCAACCTTCCAGCTCCCAGCTCCCACCTAGCAGCTCCCGGCTCCTGGCTCCCACCTCCCTCCTCCCACCTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCACCTCCCACCTCCCTCCTCCCAGTTCCTACCTCCCATCTCCCAGCTCCCAGCTGCCACCTCCCAGCTTCTGCCTCCCTCCTCCCAGTTCCCACCTCCCAGCTCCCACCTCCCAGCTCCCGCCTCCCTCATCCTAGTTCCCACCTCCCAGCTCCCAGCTCCCTCCTCCCACCTCCCACCTCCCTCCTTTCACCTCCCACCTGCCACCTCCCGCCTCCCACCTTCCAGCTCCCGCCTCCCACCTTCCAGCTCCCGCCTCCCTCCTCCCAGTTCCCACCTCCCACCTCCCAGCTCCCACCTCCCAACTCCCTCCTCCCACCCCCCACCTCCCTCCTCCCAGTTTCCACCTCCCCGTTCCCACCTCCCACCTCCCTCCTCCCACCTCCCAACTCTCTCCTCCCACCTTCCAGTTCCCACCTCCTTCCTCGCAGTTCCCACCTCCCAGCTCCCACCTTCCAGCTCCCAGCTCCCAGCTCCCG	10	PASS	ClusterIDs=HG2_PB_HySA_29941:HG3_PB_pbsv_16029:HG2_PB_PB10Xdip_12873:HG4_PB_pbsv_16301;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_12873;NumExactMatchSVs=1;ClusterMaxShiftDist=0.089153;ClusterMaxSizeDiff=0.089153;ClusterMaxEditDist=0.200456;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=692;DistBack=-23;DistForward=23;DistMin=-23;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1512;REFWIDENED=16:89973750-89975261;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9986;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2120.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:9:84:./.:3:23:0:1:./.:255:268:322:319:./.:0:1:./.:4:39:.:1174:.
chr17	190129	HG2_PB_SVrefine2Falcon1plusDovetail_4566	G	GCCCAGGCCTCCCCACATCCACACTCACTGCCCCGGGCTCAGGCCTCCCCACATCCACACTCACTGCCCGGGCTCAGGCCTCCCCACATCCACACTCACTGCCCCCACCCAGGCCTCCCCACATCCACACTCACTGCCCCACCAGGCCTCCCCACATCCACACTCACTGCCCCGGGCTCAGGCCTCCCCACATCCACACTCACTGCCCCGGGCTCAGGCCTCCCCACATCCACACTCACTGCCCGGGCTCAGGCCTCCCCACATCCACACTCACTGCCCCCCACCCAGGCCTCCCCACATCCACACTCACTGCCCCCTCCCAGGCCTCCCCACATCCACACTCACTGCCCCCCACCCAGGCCACGTCCACACTCACTGCCCTGGGCCCAGGCCTCCCCACATCCACACTCACTGCCCCCCACCCAGGCCTCCCCACATCCACACTCACTGCCTCCCACCCAGGCCTCCCCACATCCACACTCACTGCCTCCCACCCAGGCCTCCCCACGTCCACACTCACTGCCCCCCCCAGGCCTCCCCACATCCACACTCACTGCCTCCCACCCAGGCCTCCCCACATCCACACTCACTGCCCCCCACCCAGGCCTCCCCACGTCCACACTCACTGCCCCCCTCCCAGGCCTCCCCACATCCACACTCACTGCCTCCCACCCAGGCCTCCCCACATCCACACTCACTGCCCTGGGCCCAGGCCTCCCCACATCCACACTCACTGCCCCCCACCCAGGCCTCCCCACGTCCACACTCACTGCCCCCCTCCCAGGCCTCCCCACATCCACACTCACTGCCTCCCACCCAGGCCTCCCCACATCCACACTCACTGCCCCCCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10134:HG2_PB_SVrefine2Falcon1plusDovetail_4566:HG4_PB_SVrefine2PBcRDovetail_8179:HG2_PB_SVrefine2PBcRplusDovetail_4185:HG2_PB_SVrefine2PB10Xhap12_11890;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4566;NumExactMatchSVs=1;ClusterMaxShiftDist=0.166773;ClusterMaxSizeDiff=0.166773;ClusterMaxEditDist=0.193384;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=850;DistBack=4254;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=825;REFWIDENED=17:190130-190954;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9872;PctRecOverlap=0.7909;SizeDiff=-11;StartDistance=-175;EndDistance=-175;GTMatch=1;TruScore=92;MatchId=2124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:1/1:2:12:0:7:./.:7:6:7:3:./.:3:2:0/1:10:13:.:.:.
chr17	230108	HG2_PB_SVrefine2Falcon1plusDovetail_4574	G	GCCTCCCGGAAGCCCTTCTCATCCCTCCCGGAAGCCCTCCTCATGCTTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCTCCTCATGCTTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCAGAAGCCCTCCTCATCCCTCCCAGAAGCCGTCCTCATCCCTCCCGGAAGCCCCCCTCATGCTTCCCGGAAGCCCCCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCCCCTCATGCTTCCCGGAAGCCCCCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCGTCCTCATCCCTCCCGGAAGCCCCCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCTCATCCCTCCTGGAAGCCCTCCTCATGCTTCCCGGATGCCCTCCACATCCCTCCGGAAGCCCTCCACATC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11899:HG3_PB_pbsv_16071:HG4_PB_SVrefine2Falcon1Dovetail_10141:HG4_PB_SVrefine2PBcRDovetail_8184:HG2_PB_SVrefine2Falcon1plusDovetail_4574:HG3_PB_SVrefine2PBcRDovetail_7918:HG2_PB_SVrefine2PBcRplusDovetail_4191:HG2_PB_SVrefine2Falcon2Bionano_8085;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4574;NumExactMatchSVs=1;ClusterMaxShiftDist=0.269307;ClusterMaxSizeDiff=0.269307;ClusterMaxEditDist=0.283822;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=457;DistBack=4657;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1194;REFWIDENED=17:230109-231302;PctSeqSimilarity=0.9551;PctSizeSimilarity=0.9014;PctRecOverlap=0.1893;SizeDiff=-50;StartDistance=-386;EndDistance=-386;GTMatch=1;TruScore=68;MatchId=2125.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:0:17:1:10:./.:1:8:2:7:./.:0:2:0/1:2:8:.:.:.
chr17	498206	HG2_PB_PB10Xdip_13475	A	ACCCTGGAGGAAGCTGGGAGATGGGAAGGGGTCTGGATCATTTCCTGATTTGATGATGCACTCTAGTGTCC	10	PASS	ClusterIDs=HG4_PB_pbsv_16368:HG4_PB_HySA_23967:HG2_PB_pbsv_16437:HG2_PB_PB10Xdip_13476:HG3_PB_HySA_24840:HG2_PB_PB10Xdip_13475:HG3_PB_pbsv_16083:HG2_PB_HySA_29981;NumClusterSVs=8;ExactMatchIDs=HG2_PB_PB10Xdip_13475:HG2_PB_PB10Xdip_13476;NumExactMatchSVs=2;ClusterMaxShiftDist=0.109589;ClusterMaxSizeDiff=0.109589;ClusterMaxEditDist=0.368794;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=70;DistBack=1;DistForward=69;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1618;REFWIDENED=17:497655-499272;PctSeqSimilarity=0.98;PctSizeSimilarity=0.9722;PctRecOverlap=0.9452;SizeDiff=-2;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=96;MatchId=2126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:28:1/1:2:15:0:12:./.:0:0:0:0:./.:1:0:./.:.:.:.:.:.
chr17	508836	HG2_PB_PB10Xdip_13481	A	AAAGATGGGGGCCTGGGGTAAGAGGGGTGGCGAGAGTCCCATCATATGGTGAGTCAGGGACGGAAACG	10	PASS	ClusterIDs=HG3_PB_HySA_24841:HG2_PB_HySA_29983:HG4_PB_pbsv_16371:HG2_PB_PB10Xdip_13482:HG2_PB_PB10Xdip_13481:HG4_PB_assemblyticsfalcon_10079:HG4_PB_HySA_23968:HG2_PB_pbsv_16440;NumClusterSVs=8;ExactMatchIDs=HG2_PB_PB10Xdip_13481:HG2_PB_PB10Xdip_13482;NumExactMatchSVs=2;ClusterMaxShiftDist=0.151515;ClusterMaxSizeDiff=0.135338;ClusterMaxEditDist=0.283688;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=67;DistBack=0;DistForward=7;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=398;REFWIDENED=17:508673-509070;PctSeqSimilarity=0.9853;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2127.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:38:1/1:0:18:2:9:./.:1:0:3:0:./.:3:0:./.:.:.:.:.:.
chr17	794920	HG3_PB_SVrefine2PBcRDovetail_7941	T	TAACCTAAGCTAACCTCACCATGCACAGCCCAACAGGGAACCTAAGCTAACCCCACCATGCACAGCCCATCAGGGAACCTAAGCTAACCCCACCATGCACAGCCCATCAGGGAACCCAAGCTAACCCCACCATGCACAACCCAACAGGGAACCTAAACTAACCCCACCATGCACAATCCAACAGGGAACCTAAGCTAACCCCACCATGCACAACCCAACAGGG	10	PASS	ClusterIDs=HG2_PB_pbsv_16455:HG4_PB_SVrefine2PBcRDovetail_8204:HG4_PB_HySA_23991:HG2_PB_HySA_30001:HG2_PB_PB10Xdip_13576:HG2_PB_PB10Xdip_13575:HG4_PB_pbsv_16394:HG2_PB_SVrefine2Falcon1plusDovetail_4590:HG3_PB_pbsv_16105:HG3_PB_SVrefine2PBcRDovetail_7941:HG2_PB_SVrefine2PBcRplusDovetail_4208:HG2_PB_SVrefine2PB10Xhap12_11917:HG2_PB_SVrefine2Falcon2Bionano_8103:HG4_PB_SVrefine2Falcon1Dovetail_10170:HG3_PB_SVrefine2Falcon1Dovetail_10187;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8103:HG2_PB_SVrefine2PB10Xhap12_11917:HG2_PB_SVrefine2PBcRplusDovetail_4208:HG3_PB_SVrefine2PBcRDovetail_7941:HG4_PB_SVrefine2PBcRDovetail_8204;NumExactMatchSVs=5;ClusterMaxShiftDist=0.158508;ClusterMaxSizeDiff=0.144522;ClusterMaxEditDist=0.293987;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=222;DistBack=13209;DistForward=78;DistMin=78;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=591;REFWIDENED=17:794921-795511;PctSeqSimilarity=0.9863;PctSizeSimilarity=1;PctRecOverlap=0.6906;SizeDiff=0;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=89;MatchId=2130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:65:1/1:3:20:4:23:1/1:1:26:2:42:1/1:0:20:./.:.:.:.:.:.
chr17	938801	HG4_PB_pbsv_16410	C	CCACCCTTTCCATCCCCCACAATTGTGCCTGCTCCCCCACCCTTCCATCCCACACCTGCTCCCACACCCCTTCATCCCCCCACACCTGCCTCCCCCCACCCCTTCCATCCCCCACACCTGTTCCCCACCCTTCCATCCCCACACCTGCTCCCCACCCCTCCCCATCCAACACCTGCTCCCCCCACCTTCCATCCCCACACCTGCTCCCCCACCCCTTCCATCCCCACACCTGCTCCCCCACCCTTCCATCCCCCTACCACCTGCTCACCCACCCCTTCCCTCCCATGCTCCCCACTCTTCCATCCCCCAACGCTGCTCCCCACCTTCATTCCCCCACACCTGCTCCCCCACCACCTTCCATCCCACACCTGCTCCCCCAGAGGATACCCATTCCATCCCCTACAACCTTCTCCCCCACCCCTTCCAATCCCGCTAACACTGTTTCCCCCTACCCCTTTCCATCCCCACACCTACTGCTGCCCCCACCCCCTTTCTCATCACCCCACACCTGCTCCGCCACCCCTTCATCCCCACACCTGCTCCCTAACCCCTTCCATCCCCAACGCTGTTCCCCCGTATCCCCTTCCATCCCCCTCACCCTGCTCCCCACCGCCTTCCATACCCACACCTGCTCCCCCACTCCCTTCATCCCCCACACCTTGCTCCGTCCCACCCCTTGCCATCCCCCACACTGCTCCGCACCACTTCATCCCCCTACACTTCTCCCCCACCCCTTCCATCCCCCAACACCTGCTCCCCCACCTTTCTACCCCCACCTGCTCCCCCAACCTTCGCATCTCCCACACCTGCTCCCACACACCCTTCCTTCCCCCTACAACCTGCTCCCCCCCCTTCCATCCCCGCACACTGCTACCCCCACCCCTTCCATCCCCACACGTGCTCCCCCTACCGCCTTCCATCCCCCACACCTGTTTCCCGGCCGCTACTCCTTCCATCCCCACATGTCCTGCTCCCCCACCTCCTTCCATACCCACACCTGCTCCCCCACCTTCCATCCCCCACACCTGCTCCTAGCCCCTCCATCCCCACACCTTATTCCCTCTACCTTTCCATCTCCCTACACCTGCTCCCGCCCCCTTCCATTCACCCACACTGCTCCCCCCCACTCCTTTCCATCCCCCACAGCTGCCTCCCGCCCGCGCTTCATCCCCCAACCTGCTCCCCACCCTTTCTACCCCCACCTGCTCCCCCA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10202:HG2_PB_SVrefine2Falcon1plusDovetail_4601:HG2_PB_pbsv_16474:HG2_PB_SVrefine2PB10Xhap12_11927:HG4_PB_pbsv_16410:HG4_PB_SVrefine2Falcon1Dovetail_10179;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_16410;NumExactMatchSVs=1;ClusterMaxShiftDist=0.143473;ClusterMaxSizeDiff=0.140337;ClusterMaxEditDist=0.261443;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1212;DistBack=65;DistForward=79;DistMin=65;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=337;REFWIDENED=17:938550-938886;PctSeqSimilarity=0.9313;PctSizeSimilarity=0.9862;PctRecOverlap=0.9398;SizeDiff=-17;StartDistance=66;EndDistance=66;GTMatch=1;TruScore=95;MatchId=2131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:42:./.:0:2:0:1:./.:0:0:0:0:./.:0:0:0/1:6:21:.:9486:.
chr17	977450	HG3_Ill_GATKHC_25951	G	GACCCCAGAATCACACAGCTCCACCCAGCCACGCCCCGCAGAGTCCAGCATACCTGCCACACGCAGA	20	PASS	ClusterIDs=HG3_Ill_GATKHC_25951:HG2_PB_pbsv_16479;NumClusterSVs=2;ExactMatchIDs=HG3_Ill_GATKHC_25951;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0882353;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=191;DistForward=35;DistMin=35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=470;REFWIDENED=17:977255-977724;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:./.:1:6:6:4:./.:0:0:0:0:./.:8:1:./.:.:.:.:9486:.
chr17	1122885	HG2_PB_SVrefine2PB10Xhap12_11941	T	TAATACAAAAGTTAGCCAGGCACAGTGGCCCTCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGACCTGGGAGGCAGAGGTTGCAGAGAGCCGAGATCATACCACTGCATTCCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAGCTGGGCACCGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGCATCACGAGGTCAAGAGATCAAGACTATCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGACACGTGCCTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCTCTTGAACTCGGGAGGCAGAGCTTGCAGTGAGCCGAGATTGCACCACTGCACTCCAGCCTGGCGACAGAGCGAGACTGTCTTAAAAAAAAAAAAAAAAAAAAAAGTCCTCAATTTGACCACATCTGCAAAGTTCCTTCTGCCATGTAATATACAAATTCCAGGGATTAGGATGTGGACACGTTTAGGAGCCATTATTCTGCCTACCATAGCCATTGTGACAGAGGGTTTCTGTTGTTTGCCAAACACACTCCTAACTGAAAGCTAACTAACTCCCAGCTCCGCCCAGGGAAGGCGGGGAAGGCCTCACAGAGGAGGCAGCCTCCTAGCCAAGACCTGAATTAACAGGAATCTGTCTGCCACATGGACAACATGGAGAGGGCATATCCATGGAAATGCTGAAAAATGAGTGTGCAAAAGGTAAGTTAGGAAACGATGAGCAGTTCAGCATTGCTGGGGTATCAGGTGCCTGCACTGGGGGAGGGTGGAGATCACGGGTGGCCTGGCACATTTGCATGTAAGGAGCTCAGCTATTACTTTGTAGGTGACAGAAAGCCATTGAAGAATACCAGCAGGGGGTGCATAATTGGACTTAGGGGCTAGAGAAATCATTTGGATTTAATGTGGAACATAAAAGCTGGGAGCTGGAGGGAAAAGCCTGCAGGCAGAAGATTCAGTGATTGCAGTGGTTTAGATTAGGGATGATCACATGAGTGTCTGGATATTCTTTTATTCTTTTTTTTTTTTTGAGACGGAGTCTCACTTTGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCGCTGCAACCTTCACCTCCCAGGTTCAAGAGATTCTCAAGTCTCAGGCCCCTGAGTAGTTGGGACTCTAGGCACAAGCCAGCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTCACACTCCCGACCTCAGGTGATCCTCCCGCCGCAGCCTCCCAAAGTGCTAGGATTACAGGCATAAGCCACCGTGCCAGGCCTCTAATAACCATTTCAAAAGGTTGAATTTTATAAAACACTTTAAAAGGGTGAATTTTATAAAACATGAATTATCTCTTTTTTTTTCCGCCCAAGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTTCAGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCCAGGGTTTCAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGTGGCCGCCACCATGCCCAGCTAATTTTTGTATTATTAGTAGAGACAGGGTTTCACCATGATGGCCAGGCTGGTCTCAAACTCCTGACCCCATGATCCACCTGCCTTAGCCTCCCAAAGTGCTGGGATCACAGGCATAAGCCACTGTGCCTGACCAACATAAATTATCTCTTAATAAAAATTAATTAATTTTTGGCCAGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCACCTGAAGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7958:HG4_PB_pbsv_16425:HG4_PB_HySA_24015:HG2_PB_pbsv_16493:HG3_PB_HySA_24886:HG4_PB_HySA_24014:HG2_PB_PB10Xdip_12898:HG3_PB_pbsv_16139:HG4_Ill_SVrefine2DISCOVARDovetail_11533:HG4_PB_assemblyticsfalcon_10124:HG3_PB_assemblyticsfalcon_10317:HG2_PB_assemblyticsPBcR_9926:HG2_PB_SVrefine2Falcon1plusDovetail_4614:HG2_Ill_SVrefine2DISCOVARplusDovetail_4968:HG2_10X_SVrefine210Xhap12_11393:HG2_PB_SVrefine2PBcRplusDovetail_4226:HG2_PB_SVrefine2PB10Xhap12_11941:HG2_PB_SVrefine2Falcon2Bionano_8124:HG4_PB_SVrefine2Falcon1Dovetail_10191:HG3_PB_SVrefine2Falcon1Dovetail_10218:HG4_PB_SVrefine2PBcRDovetail_8223;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8124:HG2_PB_SVrefine2PB10Xhap12_11941:HG2_PB_SVrefine2PBcRplusDovetail_4226;NumExactMatchSVs=3;ClusterMaxShiftDist=0.234604;ClusterMaxSizeDiff=0.234604;ClusterMaxEditDist=0.307525;PBcalls=18;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=1925;DistBack=10459;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=178;REFWIDENED=17:1122886-1123063;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9995;PctRecOverlap=0.9673;SizeDiff=1;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=98;MatchId=2135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:./.:1:13:0:2:./.:0:5:0:2:1/1:0:22:1/1:14:276:.:2017:.
chr17	1143319	HG3_Ill_150bpfermikitraw_20584	C	CCTCAGCCTCCCAAAGTGCTGGGATTACCGGCGTGAGCCACCGCACCCAGCCCTCTCAGTCCT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4702:HG2_PB_HySA_30035:HG4_PB_assemblyticsfalcon_10125:HG2_PB_pbsv_16495:HG4_PB_HySA_24016:HG3_PB_pbsv_16141:HG4_Ill_svaba_20361:HG4_Ill_scalpel_15027:HG4_Ill_manta_3782:HG4_Ill_Krunchall_22447:HG4_Ill_GATKHC_26083:HG4_Ill_GATKHCSBGrefine_11168:HG4_Ill_250bpfermikitraw_21463:HG4_Ill_150bpfermikitraw_20661:HG3_Ill_svaba_20570:HG3_Ill_GATKHC_25956:HG3_Ill_250bpfermikitraw_21165:HG3_Ill_150bpfermikitraw_20584:HG2_Ill_svaba_20387:HG2_Ill_SpiralSDKrefine_6496:HG2_Ill_GATKHC_26119:HG2_Ill_250bpfermikitraw_21795:HG2_Ill_150bpfermikitraw_20532:HG3_PB_HySA_24888:HG3_Ill_Spiral_16888:HG3_Ill_Krunchall_21689:HG2_Ill_Krunchall_22100:HG2_10X_SVrefine210Xhap12_11395;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20532:HG2_Ill_250bpfermikitraw_21795:HG2_Ill_GATKHC_26119:HG2_Ill_SpiralSDKrefine_6496:HG2_Ill_svaba_20387:HG3_Ill_150bpfermikitraw_20584:HG3_Ill_250bpfermikitraw_21165:HG3_Ill_GATKHC_25956:HG3_Ill_svaba_20570:HG4_Ill_150bpfermikitraw_20661:HG4_Ill_250bpfermikitraw_21463:HG4_Ill_GATKHCSBGrefine_11168:HG4_Ill_GATKHC_26083:HG4_Ill_Krunchall_22447:HG4_Ill_manta_3782:HG4_Ill_scalpel_15027:HG4_Ill_svaba_20361:HG4_PB_assemblyticsfalcon_10125;NumExactMatchSVs=18;ClusterMaxShiftDist=0.078125;ClusterMaxSizeDiff=0.0625;ClusterMaxEditDist=0.285714;PBcalls=6;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=62;DistBack=1589;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=115;REFWIDENED=17:1143320-1143434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2136.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:0:22:1:19:./.:0:11:4:14:1/1:0:30:./.:.:.:.:.:.
chr17	1180079	HG2_PB_SVrefine2Falcon1plusDovetail_4620	T	TCAAAAAAAAAAAAAGAGAGAGGGGTCTTGTTCTGTTGCTGAGGCTGGAGTGCAGTGGCGTGATCATGGCTCACTGCAACGTCAAACTTCTGGACTCAAGTGATCCTCCTGAACAGCAGGGACTATAAGTGCCTGGCTTGAAACCCAGTTTTTTTTTGTTTTTTGTTTTTTTTTGAGACAAAGTCTCTCTCTGTCGCCCAGGCTGGAATGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCGCCTGCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCGTGCCACCACACCTGGCAATTTTTTTGTATTTTTAGTAGAAAGGGCATTTCACTGTGTTGACCAGGGTGATCTCGATCTCCTGGCCTCGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGG	20	PASS	ClusterIDs=HG2_PB_pbsv_16499:HG4_PB_HySA_24020:HG3_PB_pbsv_16146:HG4_PB_assemblyticsfalcon_10129:HG2_PB_assemblyticsPBcR_9930:HG3_PB_assemblyticsfalcon_10322:HG4_PB_pbsv_16428:HG4_PB_HySA_24019:HG4_PB_SVrefine2Falcon1Dovetail_10194:HG4_PB_SVrefine2PBcRDovetail_8224:HG4_Ill_SVrefine2DISCOVARDovetail_11534:HG4_Ill_MetaSV_1951:HG4_Ill_GATKHCSBGrefine_11170:HG3_Ill_GATKHCSBGrefine_10758:HG2_PB_SVrefine2PBcRplusDovetail_4230:HG2_PB_SVrefine2PB10Xhap12_11946:HG2_PB_SVrefine2Falcon2Bionano_8126:HG2_PB_SVrefine2Falcon1plusDovetail_4620:HG2_Ill_GATKHCSBGrefine_10821:HG2_10X_SVrefine210Xhap12_11397:HG3_PB_SVrefine2Falcon1Dovetail_10222:HG3_PB_SVrefine2PBcRDovetail_7960:HG3_Ill_SVrefine2DISCOVARDovetail_11742:HG3_Ill_MetaSV_2019:HG2_PB_PB10Xdip_12902;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11397:HG2_Ill_GATKHCSBGrefine_10821:HG2_PB_SVrefine2Falcon1plusDovetail_4620:HG2_PB_SVrefine2Falcon2Bionano_8126:HG2_PB_SVrefine2PB10Xhap12_11946:HG2_PB_SVrefine2PBcRplusDovetail_4230:HG3_Ill_GATKHCSBGrefine_10758:HG4_Ill_GATKHCSBGrefine_11170:HG4_Ill_MetaSV_1951:HG4_Ill_SVrefine2DISCOVARDovetail_11534:HG4_PB_SVrefine2PBcRDovetail_8224;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0735786;ClusterMaxSizeDiff=0.0735786;ClusterMaxEditDist=0.191419;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=433;DistBack=26593;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=17:1180080-1180080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:41:1/1:0:15:0:15:./.:0:4:0:10:1/1:0:18:1/1:2:53:.:.:.
chr17	1592857	HG4_PB_assemblyticsfalcon_10141	T	TGATCCCCTCCCTCCAAGATGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCAGAGGGGC	10	PASS	ClusterIDs=HG2_PB_pbsv_16507:HG4_PB_assemblyticsfalcon_10141:HG3_PB_assemblyticsfalcon_10334:HG2_PB_SVrefine2Falcon1plusDovetail_4626:HG4_PB_pbsv_16434:HG3_PB_SVrefine2Falcon1Dovetail_10227:HG2_PB_SVrefine2Falcon2Bionano_8131:HG4_PB_SVrefine2Falcon1Dovetail_10199;NumClusterSVs=8;ExactMatchIDs=HG4_PB_assemblyticsfalcon_10141;NumExactMatchSVs=1;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.23;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=92;DistBack=-1;DistForward=85;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3961;REFWIDENED=17:1602757-1592857;PctSeqSimilarity=0.9671;PctSizeSimilarity=0.9388;PctRecOverlap=0.404;SizeDiff=-6;StartDistance=56;EndDistance=56;GTMatch=0;TruScore=76;MatchId=2138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:15:0|1:22:3:3:11:./.:0:0:4:0:./.:4:0:./.:.:.:.:.:.
chr17	2207585	HG2_PB_SVrefine2PB10Xhap12_11959	T	TCCCGGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCAAGCTTTTCTCCCGCCTCAGCCTCTCTACTATTCCCATTTCTAAGATTAGGAAACTGAATCCCAGAGAACGGAAGTAAATTGCCCAGGGTGACACCGTGGATGAAAACCTATCAAAGCCTTTTTCATTACAGCAAGCCACATCCCCAAACCCTCTTTTTTTTTTTTTTTTTTTTTCTTAAGACGGAGTCTCGCTCTGTCG	20	PASS	ClusterIDs=HG3_PB_HySA_24907:HG2_PB_pbsv_16517:HG3_PB_pbsv_16167:HG4_PB_HySA_24031:HG4_PB_pbsv_16440:HG2_PB_HySA_30054:HG4_Ill_MetaSV_1957:HG4_Ill_GATKHCSBGrefine_11179:HG3_Ill_manta_3636:HG3_Ill_MetaSV_2025:HG3_Ill_GATKHCSBGrefine_10773:HG2_Ill_MetaSV_1887:HG2_Ill_GATKHCSBGrefine_10836:HG2_PB_PB10Xdip_12983:HG2_PB_PB10Xdip_12982:HG4_PB_SVrefine2Falcon1Dovetail_10211:HG2_PB_SVrefine2Falcon2Bionano_8135:HG2_PB_SVrefine2Falcon1plusDovetail_4633:HG4_PB_SVrefine2PBcRDovetail_8230:HG4_Ill_SVrefine2DISCOVARDovetail_11541:HG3_PB_SVrefine2PBcRDovetail_7968:HG3_PB_SVrefine2Falcon1Dovetail_10234:HG3_Ill_SVrefine2DISCOVARDovetail_11750:HG2_PB_SVrefine2PBcRplusDovetail_4237:HG2_PB_SVrefine2PB10Xhap12_11959:HG2_Ill_SVrefine2DISCOVARplusDovetail_4976:HG2_10X_SVrefine210Xhap12_11412;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4976:HG2_PB_SVrefine2PB10Xhap12_11959:HG2_PB_SVrefine2PBcRplusDovetail_4237:HG3_Ill_SVrefine2DISCOVARDovetail_11750:HG3_PB_SVrefine2Falcon1Dovetail_10234:HG3_PB_SVrefine2PBcRDovetail_7968:HG4_Ill_SVrefine2DISCOVARDovetail_11541:HG4_PB_SVrefine2PBcRDovetail_8230;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0447761;ClusterMaxSizeDiff=0.0417457;ClusterMaxEditDist=0.229755;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=259;DistBack=12530;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=87;REFWIDENED=17:2207586-2207672;PctSeqSimilarity=0.9981;PctSizeSimilarity=1;PctRecOverlap=0.9846;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=2139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:2:20:0:17:./.:1:14:1:9:1/1:1:17:./.:.:.:.:.:.
chr17	2623091	HG2_PB_SVrefine2Falcon1plusDovetail_4637	C	TCTGGGTCCTTCCTTTAGGAGGAAGGAAGAGATGGGTCCTTCCTTCAGGAGGGTTGCAAGCAAAGCCATTTTTTGCAAGCAAAGCCAGAAGGAAGAGATGGGTCCTTCCAT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_20556:HG2_PB_pbsv_16524:HG4_PB_HySA_24047:HG4_PB_assemblyticsfalcon_10166:HG4_PB_SVrefine2Falcon1Dovetail_10219:HG3_PB_assemblyticsfalcon_10357:HG3_PB_SVrefine2Falcon1Dovetail_10241:HG4_Ill_SVrefine2DISCOVARDovetail_11547:HG3_PB_SVrefine2PBcRDovetail_7972:HG3_Ill_SVrefine2DISCOVARDovetail_11755:HG2_PB_SVrefine2PBcRplusDovetail_4242:HG2_PB_SVrefine2PB10Xhap12_11965:HG2_PB_SVrefine2Falcon2Bionano_8139:HG2_PB_SVrefine2Falcon1plusDovetail_4637:HG2_Ill_SVrefine2DISCOVARplusDovetail_4982:HG2_10X_SVrefine210Xhap12_11418:HG4_PB_pbsv_16447:HG4_Ill_GATKHC_26117:HG4_Ill_GATKHCSBGrefine_11184:HG3_Ill_GATKHC_25986:HG3_Ill_GATKHCSBGrefine_10776:HG2_Ill_GATKHC_26157:HG2_Ill_GATKHCSBGrefine_10841:HG2_PB_PB10Xdip_12997:HG2_PB_PB10Xdip_12996:HG3_PB_HySA_24916:HG4_Ill_MetaSV_1960:HG2_PB_HySA_30065:HG4_PB_SVrefine2PBcRDovetail_8237:HG2_Ill_250bpfermikitraw_21821;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11418:HG2_Ill_SVrefine2DISCOVARplusDovetail_4982:HG2_PB_SVrefine2Falcon1plusDovetail_4637:HG2_PB_SVrefine2Falcon2Bionano_8139:HG2_PB_SVrefine2PB10Xhap12_11965:HG2_PB_SVrefine2PBcRplusDovetail_4242:HG3_Ill_SVrefine2DISCOVARDovetail_11755:HG3_PB_SVrefine2PBcRDovetail_7972:HG4_Ill_SVrefine2DISCOVARDovetail_11547;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0717489;ClusterMaxSizeDiff=0.0269058;ClusterMaxEditDist=0.213333;PBcalls=17;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=110;DistBack=0;DistForward=53927;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=101;REFWIDENED=17:2623065-2623165;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.9909;PctRecOverlap=0.982;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:./.:1:6:0:4:./.:1:9:1:13:1/1:3:55:./.:.:.:.:.:.
chr17	2934512	HG2_PB_SVrefine2PB10Xhap12_11969	G	GCCAGGCCCAGATGTGAGGTGGGAGGTGCTGGTTCCTGGGTCCCCCAGTCCCTTCCTGAGCTCTCCAGACTATCGAGAGCTCCAGGCCCAGTTGTGAGGTGGGAAGGGCTGGTTCCTGGGTCCCCCAGTCCCTTCCTGAGCTCACCAGACTATCGAGAGCTCCAGGTCCAGATGTGAGGTGGAAGGTGCTGGTTCCTGGGTCCCCCAGTCCCTTCCTGAGCTCTCCAGACTATCGGGAGCTCCAGGCCCAGTTGTGAGGTGGGAAGGTGCTGGTTCCTGGGTCCCCCAGTCCCTTCCTGAGCTCTCCAGACTATCGAGAGCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4642:HG4_PB_pbsv_16452:HG2_PB_PB10Xdip_13102:HG2_PB_PB10Xdip_13101:HG2_PB_HySA_30071:HG2_PB_pbsv_16529:HG3_PB_HySA_24922:HG3_PB_HySA_24921:HG3_PB_SVrefine2Falcon1Dovetail_10244:HG4_PB_SVrefine2PBcRDovetail_8240:HG3_PB_SVrefine2PBcRDovetail_7975:HG2_PB_SVrefine2PB10Xhap12_11969:HG2_PB_SVrefine2Falcon2Bionano_8142:HG4_PB_SVrefine2Falcon1Dovetail_10222:HG2_PB_SVrefine2PBcRplusDovetail_4246;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8142:HG2_PB_SVrefine2PB10Xhap12_11969:HG3_PB_SVrefine2PBcRDovetail_7975;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0582822;ClusterMaxSizeDiff=0.0490798;ClusterMaxEditDist=0.293853;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=321;DistBack=1040;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=317;REFWIDENED=17:2934513-2934829;PctSeqSimilarity=0.9946;PctSizeSimilarity=1;PctRecOverlap=0.5545;SizeDiff=0;StartDistance=-143;EndDistance=-143;GTMatch=0;TruScore=84;MatchId=2144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:0:19:2:17:./.:1:11:1:11:1/1:1:13:./.:1:12:.:.:.
chr17	3691988	HG2_PB_SVrefine2PB10Xhap12_11974	A	ATTAAAAATAATAATTATTAAAATAATTATTTAAAAATAATAATTATTAAAATAATTAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10226:HG2_PB_PB10Xdip_13177:HG3_PB_pbsv_16185:HG3_PB_SVrefine2PBcRDovetail_7979:HG3_PB_SVrefine2Falcon1Dovetail_10248:HG3_Ill_SVrefine2DISCOVARDovetail_11758:HG2_PB_SVrefine2PBcRplusDovetail_4250:HG2_PB_SVrefine2PB10Xhap12_11974:HG2_Ill_SVrefine2DISCOVARplusDovetail_4988;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4988:HG2_PB_SVrefine2PB10Xhap12_11974:HG2_PB_SVrefine2PBcRplusDovetail_4250:HG3_Ill_SVrefine2DISCOVARDovetail_11758:HG3_PB_SVrefine2Falcon1Dovetail_10248:HG3_PB_SVrefine2PBcRDovetail_7979;NumExactMatchSVs=6;ClusterMaxShiftDist=0.115702;ClusterMaxSizeDiff=0.0826446;ClusterMaxEditDist=0.196721;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=191;REFWIDENED=17:3691989-3692179;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:56:1/1:1:15:4:17:./.:4:0:6:0:0/1:12:37:./.:.:.:.:.:.
chr17	3802517	HG3_Ill_SVrefine2DISCOVARDovetail_11759	T	TGAGACGGAGTCTCGCTCTGTCGCCAGGCTGGAGTGCAGCGGCACGATCTCGGCTCACTGCAGCCTCCACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGTGTGCCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGGGCCTGGCCGAGACCCCATCTCTTGCAAACAAACAAAAAAGAGTTGGGGCCAGGCACGGTGGTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATTGCGCCACTGCACTCCAGCCTGGGGGACAGAGAGAGACTTTGCCTCAAACAAACAAACAAACAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10229:HG2_PB_HySA_30093:HG2_PB_pbsv_16538:HG2_PB_HySA_30092:HG4_PB_pbsv_16462:HG3_PB_pbsv_16187:HG2_PB_HySA_30091:HG3_PB_HySA_24941:HG4_PB_HySA_24065:HG3_Ill_MetaSV_2034:HG3_Ill_GATKHCSBGrefine_10782:HG4_Ill_MetaSV_1963:HG2_PB_PB10Xdip_13181:HG2_PB_PB10Xdip_13180:HG2_Ill_breakscan11_4703:HG2_Ill_MetaSV_1893:HG4_PB_assemblyticsfalcon_10182:HG4_PB_SVrefine2PBcRDovetail_8245:HG2_PB_SVrefine2Falcon1plusDovetail_4647:HG3_PB_SVrefine2Falcon1Dovetail_10249:HG3_PB_SVrefine2PBcRDovetail_7980:HG3_Ill_SVrefine2DISCOVARDovetail_11759:HG2_PB_SVrefine2PBcRplusDovetail_4251:HG2_PB_SVrefine2PB10Xhap12_11975:HG2_PB_SVrefine2Falcon2Bionano_8146:HG4_Ill_SVrefine2DISCOVARDovetail_11553:HG2_Ill_SVrefine2DISCOVARplusDovetail_4990;NumClusterSVs=27;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8146:HG2_PB_SVrefine2PB10Xhap12_11975:HG2_PB_SVrefine2PBcRplusDovetail_4251:HG3_Ill_SVrefine2DISCOVARDovetail_11759:HG3_PB_SVrefine2PBcRDovetail_7980;NumExactMatchSVs=5;ClusterMaxShiftDist=0.162428;ClusterMaxSizeDiff=0.162428;ClusterMaxEditDist=0.247744;PBcalls=19;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=618;DistBack=24605;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=38;REFWIDENED=17:3802518-3802555;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.9984;PctRecOverlap=0.9645;SizeDiff=-1;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=98;MatchId=2148.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:78:1/1:0:35:0:18:./.:0:6:0:4:1/1:0:24:1/1:3:80:.:.:.
chr17	4287349	HG2_PB_SVrefine2PBcRplusDovetail_4255	A	ATGATCCGCCCACCTCTGCCTCCCAAAGTGCTGGGATTACAGCCGTGAGCAACTACGCCTGGCCATCGAGTCCAGTTTTTTTTTTTTTTTTTGAGGTGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCGGTGGCACGATCTCGGTTCACTGCAACCTCTGCCTCCTGGGTTCAGGCAATTCTCTGCCTCAGCCTCCTGAGTAGCTGGGATCACAGGCTCCTGCCACCACAGCTGGCTAATTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTCACCCAGGCTGGAGTTCAGTGGCATGATCTTGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGATTAGAGGCAGGCGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCATGATCCTCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGGGCCTGGTCTCTATCTCTTTTTTTGGAGACAGGGCCTCGCCCTATTAACCAGGCTGGGGTGCAGTGGCATGATCACAATTCACTGCAGCCTCCACCTTCTAGACTCGAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10252:HG2_PB_HySA_30103:HG3_PB_pbsv_16193:HG2_PB_pbsv_16546:HG4_PB_pbsv_16467:HG2_Ill_MetaSV_1895:HG4_Ill_GATKHCSBGrefine_11197:HG3_Ill_MetaSV_2036:HG3_Ill_GATKHCSBGrefine_10786:HG2_Ill_SVrefine2DISCOVARplusDovetail_4995:HG4_PB_HySA_24075:HG2_PB_PB10Xdip_13190:HG2_PB_PB10Xdip_13189:HG4_PB_assemblyticsfalcon_10190:HG3_PB_SVrefine2PBcRDovetail_7984:HG3_Ill_SVrefine2DISCOVARDovetail_11766:HG2_PB_SVrefine2PBcRplusDovetail_4255:HG2_PB_SVrefine2PB10Xhap12_11980:HG2_Ill_SVrefine2DISCOVARplusDovetail_4994:HG2_10X_SVrefine210Xhap12_11439:HG4_PB_SVrefine2Falcon1Dovetail_10233:HG2_PB_SVrefine2Falcon2Bionano_8150:HG2_PB_SVrefine2Falcon1plusDovetail_4651:HG4_PB_SVrefine2PBcRDovetail_8248;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11439:HG2_Ill_SVrefine2DISCOVARplusDovetail_4994:HG2_PB_SVrefine2PB10Xhap12_11980:HG2_PB_SVrefine2PBcRplusDovetail_4255:HG3_Ill_SVrefine2DISCOVARDovetail_11766;NumExactMatchSVs=5;ClusterMaxShiftDist=0.111987;ClusterMaxSizeDiff=0.111987;ClusterMaxEditDist=0.181962;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=635;DistBack=19651;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=17:4287350-4287374;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=0.9748;SizeDiff=0;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=99;MatchId=2150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:0:12:2:14:1/1:0:5:0:13:1/1:0:19:1/1:4:80:.:.:.
chr17	4365372	HG2_PB_SVrefine2PB10Xhap12_11981	T	TCATCCATCCACCCATTCACCAATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACCAATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACCAATCTATCCATCCATCTATCCATCCATCCATCCATCCACCAATCTATCCATCCATCTATCCATCCATCCATCCATCCATCCATCCACCCATCCATCCATCCATCCATCCATCCACCCATCCACCCATCCACCAATCCATCCATCCATCCATCCATCCACCAATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACCAATCTATCCATCCATTCATCCACCAATCTATCCATCCATCCACCCATCCACCAATCCATCCATCCACCAATCCATCCACCAATCCATCCATCCATCCATCCATCCACCCACCCACCAGTCCATCCACCCACCAATCCATCCATTCATCCATCCACCCACCAATCCATCCACCCACCAATCCATCCATCCAGCCATCCATCCACCCACCCACCCACCCACCCATCCACCAATCCATCCATCCATCCACCCACCCACCCACCCACCAATCCATCCATCCACCCACCCACCAATCCATCCATCCATCCATCCATCCACCCACCCACCTACCCACC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10254:HG4_PB_pbsv_16469:HG4_PB_SVrefine2Falcon1Dovetail_10234:HG2_PB_pbsv_16548:HG3_PB_SVrefine2PBcRDovetail_7985:HG2_PB_SVrefine2Falcon1plusDovetail_4652:HG4_PB_SVrefine2PBcRDovetail_8249:HG2_PB_SVrefine2PBcRplusDovetail_4256:HG2_PB_SVrefine2PB10Xhap12_11981:HG2_PB_SVrefine2Falcon2Bionano_8151;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8151:HG2_PB_SVrefine2PB10Xhap12_11981:HG2_PB_SVrefine2PBcRplusDovetail_4256;NumExactMatchSVs=3;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.239394;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=648;DistBack=752;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=817;REFWIDENED=17:4365373-4366189;PctSeqSimilarity=0.9507;PctSizeSimilarity=1;PctRecOverlap=0.265;SizeDiff=0;StartDistance=-477;EndDistance=-477;GTMatch=0;TruScore=73;MatchId=2151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:47:1/1:6:25:1:10:./.:1:78:10:63:0/1:12:7:0/1:7:52:.:.:.
chr17	4694028	HG2_PB_SVrefine2Falcon1plusDovetail_4654	G	GTATACAGCAAGCATCCTGCACACTCCACAGACGCTGCAAATGCAACGCGTCCAACACGGGTCCCACCACCATCCCCCTAAGAACTACACCTCCTCCTGTGTTCCCTGTCTCTGTGAATAAATGGCACCCTCACCCTTCAGCTACCCAAGCGCATGTGCGTCATGCCTCACACCAAGCAGGTGCTCAGCTCCATAATGTATGTTTATTAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_16199:HG4_PB_assemblyticsfalcon_10200:HG4_PB_pbsv_16472:HG2_Ill_breakscan11_4705:HG2_PB_pbsv_16553:HG2_PB_HySA_30111:HG3_PB_HySA_24957:HG4_PB_SVrefine2PBcRDovetail_8251:HG2_PB_SVrefine2PBcRplusDovetail_4259:HG2_PB_SVrefine2PB10Xhap12_11984:HG4_Ill_SVrefine2DISCOVARDovetail_11562:HG4_Ill_MetaSV_1965:HG2_Ill_MetaSV_1896:HG4_PB_SVrefine2Falcon1Dovetail_10236:HG4_Ill_GATKHCSBGrefine_11199:HG3_PB_SVrefine2PBcRDovetail_7989:HG3_PB_SVrefine2Falcon1Dovetail_10256:HG3_Ill_SVrefine2DISCOVARDovetail_11771:HG3_Ill_MetaSV_2037:HG3_Ill_GATKHCSBGrefine_10789:HG2_PB_SVrefine2Falcon2Bionano_8154:HG2_PB_SVrefine2Falcon1plusDovetail_4654:HG2_Ill_SVrefine2DISCOVARplusDovetail_5000:HG2_Ill_GATKHCSBGrefine_10859:HG2_10X_SVrefine210Xhap12_11443:HG2_PB_PB10Xdip_13201:HG2_PB_PB10Xdip_13200;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11443:HG2_Ill_GATKHCSBGrefine_10859:HG2_Ill_SVrefine2DISCOVARplusDovetail_5000:HG2_PB_SVrefine2Falcon1plusDovetail_4654:HG2_PB_SVrefine2Falcon2Bionano_8154:HG3_Ill_GATKHCSBGrefine_10789:HG3_Ill_MetaSV_2037:HG3_Ill_SVrefine2DISCOVARDovetail_11771:HG3_PB_SVrefine2Falcon1Dovetail_10256:HG3_PB_SVrefine2PBcRDovetail_7989:HG4_Ill_GATKHCSBGrefine_11199:HG4_PB_SVrefine2Falcon1Dovetail_10236;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0696056;ClusterMaxSizeDiff=0.0603248;ClusterMaxEditDist=0.257919;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=210;DistBack=-1;DistForward=39301;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=17:4694029-4694029;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:0:20:0:15:1/1:0:30:0:28:1/1:0:21:./.:.:.:.:.:.
chr17	4756047	HG2_PB_SVrefine2PB10Xhap12_11986	G	GGGGGCAGTGTGATTTGTGGGGGAGTGTGGTTGGTGGGGGGAGTGTGATTTGTGGGGGAGTGTGGTTGGTGGGGGGAGTGTGGTTGGTGGGGGAGTGTGGTTGGTGGGGGAGTGTGGTTGGTGGGGGAGTGTGGTTGGTGGGGGAGTGTGTTTGGTGGGGGAGTGTGTTTGGTGGGGGAGTGTGGTTGGTGGGGGGAGTGTGGTTGGTGGGGGAGTGTGGTTGGTGGGGGAGTGTGGTTTGTGGGGGAGTGTGGTTGGTGGGGGAGTGTGGTTGGGGGAGTGTGGTTGATGGGTGGAGTGTGGTTGAGGGGGAGTGTGGTTGAGGGGGAGTGTGGTTGGTGGGGGAGTGTGGTTGGTGGGGAGTGTGGTTGGTGGGGCAGTGTGGTTGATGGGGGGAGTGTGGTTGATGGGGAGTGTGGTTGATGGGGGGAGTGTGGTTGGTGGGGGAGTGTGGTTGGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10238:HG2_PB_pbsv_16555:HG2_PB_HySA_30112:HG2_PB_PB10Xdip_13457:HG3_PB_HySA_24958:HG2_PB_SVrefine2PBcRplusDovetail_4261:HG2_PB_SVrefine2PB10Xhap12_11986:HG2_PB_SVrefine2Falcon2Bionano_8156:HG3_PB_SVrefine2PBcRDovetail_7991:HG3_PB_SVrefine2Falcon1Dovetail_10258:HG2_PB_SVrefine2Falcon1plusDovetail_4656:HG4_PB_SVrefine2PBcRDovetail_8253;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11986:HG2_PB_SVrefine2PBcRplusDovetail_4261;NumExactMatchSVs=2;ClusterMaxShiftDist=0.233333;ClusterMaxSizeDiff=0.233333;ClusterMaxEditDist=0.271287;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=458;DistBack=-732;DistForward=-1;DistMin=-732;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=712;REFWIDENED=17:4756048-4756759;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9978;PctRecOverlap=0.963;SizeDiff=-1;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=98;MatchId=2153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:1:8:1:5:1/1:1:199:0:134:./.:0:6:1/1:2:26:.:521:.
chr17	4959187	HG2_PB_HySA_30117	C	CTTTTTTTTTTTTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGACAATAGTGGAGGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTGAGATTAGGGTTGGTGATGACTCTTAACGAGCACCCTGCCTTCAAGCATCTGTTTAACAAAGCACATTTGCACCGCCCTTAATCCATTTAACCCTGAGTGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACAGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCTGCCTTTCTATTCCACAAAGCCGCCAATTGTCATCCTGCGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGTGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGCGGCTGGCCGGCGGGGGCTGACCCCCCCCCACCTCCCTCCCCGGACGGGGCGGCTGGCCGGCGGGGGGGGCCAACACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCTGGCGGAGGCTGACCCCCCACTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGCTTACCCCCCCACCTCCCTCCCGGACGGGCGGCTGGCCGGGTGGGCGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCACCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGGCGCACGGCTGGCCAGGTGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGTCGGGGGGTCTGACCCCACCCCCTCCCTCCAGATGGGGCGGCTGGCCGGGCGCGGGGTTGACCCCCCCCACCTCCCTCCGGACGGGGTGGCTGCCGGGCGGAGATGCTCCTCACTTCCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGCAGAGGGTCTCCTCACTTCTCAGACGGGCGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGGTCTCGGCCGGGCAGAGGCACTCCCTCACATCCCAGATGGGGCGGCGGGCAGAGGCGCTCCCACATCTCAGACGATGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGATGGCCGGCCGGGCGGAGAACACTCCTCACTTTCCAGACTGGGCAGCCAGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGGCGGCCGGGCAGAGGCTGCAATCTCAGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCCAGCGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTGGGAGGCTGAGGTTGGCGGGATCACTCGCGCGTTAGGGCTGGAGACCTGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAAACCAGTCAGGCATGGCGGCGCGTGCCTGCAATGGCAGGCACTGGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAATGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGCTCCGCATGAGAGGGGGAGCCGTGGGGAGAGGGAGACAGAGGGAGGGGCT	10	PASS	ClusterIDs=HG2_PB_HySA_30115:HG2_PB_pbsv_16557:HG4_PB_assemblyticsfalcon_10203:HG4_PB_pbsv_16476:HG4_PB_SVrefine2Falcon1Dovetail_10239:HG3_PB_pbsv_16203:HG3_PB_SVrefine2Falcon1Dovetail_10260:HG4_PB_SVrefine2PBcRDovetail_8255:HG2_PB_HySA_30117:HG2_PB_PB10Xdip_13459:HG2_PB_SVrefine2PB10Xhap12_11987:HG3_PB_SVrefine2Falcon1Dovetail_10259:HG2_PB_PB10Xdip_13458:HG2_PB_SVrefine2Falcon2Bionano_8157:HG2_PB_SVrefine2PBcRplusDovetail_4263:HG4_PB_HySA_24084:HG2_PB_SVrefine2PBcRplusDovetail_4262:HG2_PB_HySA_30116:HG2_PB_SVrefine2Falcon1plusDovetail_4657;NumClusterSVs=19;ExactMatchIDs=HG2_PB_HySA_30117;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0847384;ClusterMaxSizeDiff=0.0847384;ClusterMaxEditDist=0.223953;PBcalls=19;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=2275;DistBack=-29;DistForward=30;DistMin=-29;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=31;REFWIDENED=17:4959187-4959217;PctSeqSimilarity=0.9857;PctSizeSimilarity=0.9961;PctRecOverlap=0.9956;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=2154.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:1/1:0:32:0:20:./.:0:1:0:1:./.:0:4:1/1:9:184:.:2381:.
chr17	4961439	HG2_PB_SVrefine2Falcon1plusDovetail_4658	A	AATTTTTTTTTTTTAGACAGAGTTTCACTCTTGTTGCCCGGGCTGGAGTGCAATGGCATGATCTCAGCTCACCGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCCCACAAGTAGCTGGGATTACAGGCATGTGACACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCCGACCTCAGGTGATCCACCCACCTCGGTCTCCCAAAGTACTGGGATTACAGGCATGAGCTACCACGCCCAGCCTTTTTTTTTTTTTTTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4658:HG2_PB_assemblyticsPBcR_10010:HG2_PB_PB10Xdip_13460:HG2_PB_HySA_30119:HG2_PB_HySA_30118:HG3_PB_SVrefine2PBcRDovetail_7992:HG3_PB_pbsv_16204:HG3_Ill_MetaSV_2038:HG2_PB_SVrefine2PBcRplusDovetail_4264:HG2_PB_pbsv_16558:HG2_PB_SVrefine2Falcon2Bionano_8158:HG3_PB_SVrefine2Falcon1Dovetail_10261:HG2_PB_SVrefine2PB10Xhap12_11988;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4658:HG2_PB_SVrefine2PB10Xhap12_11988;NumExactMatchSVs=2;ClusterMaxShiftDist=0.115385;ClusterMaxSizeDiff=0.115385;ClusterMaxEditDist=0.350932;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=0;DistForward=1694;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=313;REFWIDENED=17:4961440-4961752;PctSeqSimilarity=0.9511;PctSizeSimilarity=0.9812;PctRecOverlap=0.0596;SizeDiff=-6;StartDistance=-297;EndDistance=-297;GTMatch=0;TruScore=66;MatchId=2155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:23:./.:6:10:9:10:./.:2:0:2:1:./.:7:0:./.:1:10:.:.:.
chr17	4972482	HG2_PB_SVrefine2Falcon2Bionano_8159	T	TTTTTTTTTTTTTTTTGAGACAGGGTCTCATTCTATTGCCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCGCTGCAACCTCTGCCTCCCGGGCTCAAGTGATTCTTGTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGTGTGCCACCGCACTCAGCTAATTTTTTTGTTTTTTTTAGTAGAGACGGGGTTTCACCATGTTGACCGGGCTGGTCTCGAACTCCTGAGCTCAGGCAATCCACCTGACTCGGCCTCCCAAAGTGATAGGATTACAGGCATGAGCCACCACACCTGGCCTCCCCTTCCGATCTGAGTAAAC	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2039:HG2_PB_pbsv_16559:HG3_PB_pbsv_16205:HG3_Ill_SVrefine2DISCOVARDovetail_11772:HG2_PB_SVrefine2Falcon2Bionano_8159:HG2_Ill_SVrefine2DISCOVARplusDovetail_5001:HG3_PB_SVrefine2PBcRDovetail_7993:HG3_PB_SVrefine2Falcon1Dovetail_10262:HG3_Ill_Spiral_16923:HG2_Ill_Spiral_1081:HG4_PB_SVrefine2Falcon1Dovetail_10240:HG4_PB_SVrefine2PBcRDovetail_8256:HG4_Ill_SVrefine2DISCOVARDovetail_11564:HG4_Ill_MetaSV_1966:HG2_Ill_manta_4453:HG3_PB_HySA_24961:HG2_PB_HySA_30120:HG2_Ill_MetaSV_1898:HG2_PB_PB10Xdip_13462:HG2_PB_PB10Xdip_13461:HG4_PB_pbsv_16477:HG2_PB_SVrefine2Falcon1plusDovetail_4659:HG2_10X_SVrefine210Xhap12_11447:HG2_PB_SVrefine2PBcRplusDovetail_4265:HG2_PB_SVrefine2PB10Xhap12_11989;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5001:HG2_PB_SVrefine2Falcon2Bionano_8159:HG3_Ill_SVrefine2DISCOVARDovetail_11772;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0665658;ClusterMaxSizeDiff=0.0605144;ClusterMaxEditDist=0.220913;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=322;DistBack=-299;DistForward=59190;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=299;REFWIDENED=17:4972483-4972781;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9908;PctRecOverlap=0.9938;SizeDiff=-3;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=2156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:1:30:1:23:1/1:0:10:0:6:1/1:0:9:1/1:2:43:.:.:.
chr17	5135645	HG2_PB_SVrefine2PB10Xhap12_11991	A	ATAAACAGTGCAGTGTAAACAGTGCAGTATAAACAGTGCAGTGTAAACAGTGCAGTATAAACAGTGCAGTGTAAACAGTGCAGTGTAAACAGTGCAGTGTAAACAGTGCAGTATAAACAGTGCAGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11991:HG2_PB_SVrefine2Falcon1plusDovetail_4660:HG2_PB_HySA_30121:HG4_PB_pbsv_16479:HG2_PB_pbsv_16561:HG4_Ill_SVrefine2DISCOVARDovetail_11566;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11991:HG4_Ill_SVrefine2DISCOVARDovetail_11566;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0757576;ClusterMaxEditDist=0.175824;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=126;DistBack=4244;DistForward=27;DistMin=27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=96;REFWIDENED=17:5135646-5135741;PctSeqSimilarity=0.9935;PctSizeSimilarity=1;PctRecOverlap=0.7795;SizeDiff=0;StartDistance=-28;EndDistance=-28;GTMatch=0;TruScore=92;MatchId=2157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:21:0|1:17:3:3:16:1/1:0:24:1:7:0/1:7:30:./.:.:.:.:.:.
chr17	5526117	HG2_PB_SVrefine2PB10Xhap12_11993	C	CACCCATCCATCCACTCACATATCCATTCATCTATTCACGTATCTATCCATCCACCCACCCACCCATCCATCTATCCACATAGTCATCCATCTATTCACATATCTGCCCATCTGCCCACTTACCTATCTATCCATCCTCCACTCACCTACCTATCCCATCTACCCACCTACCCATCCATCCACCCACATATCCATCCATCCACCCATCTATCCATCACTCTCTACTTACTTATCTGTCCATCCATCCACCCGCCTATACATCTACCCACATATCCATCCATCTACTCACATATCTATCCATCCACCCACCTACCCATCCATCCACCCACATATCCATCCGTCTACTCATATATCTGTCCATCTACCCACTTACCCATCTATCCATCCTCCACTCACCTTCCTATTCCATCTATCCACCTACCCCTTCATCCACCCACCTACCCATTCATCCACTCACATATCCATCCATCCATCCACCCACCTACCCATCTATTCATCACTCTCTGCTTACCTATTTACTCGCCT	20	PASS	ClusterIDs=HG4_PB_pbsv_16483:HG2_PB_PB10Xdip_13512:HG4_PB_HySA_24096:HG2_PB_pbsv_16563:HG3_Ill_manta_3640:HG3_Ill_MetaSV_2040:HG4_Ill_manta_3789:HG2_Ill_manta_4454:HG4_Ill_GATKHCSBGrefine_11206:HG4_Ill_MetaSV_1969:HG2_Ill_MetaSV_1900:HG2_Ill_GATKHCSBGrefine_10867:HG2_Ill_breakscan11_4706:HG3_PB_pbsv_16207:HG4_PB_SVrefine2PBcRDovetail_8259:HG4_PB_assemblyticsfalcon_10208:HG3_PB_assemblyticsfalcon_10398:HG3_PB_SVrefine2PBcRDovetail_7994:HG3_Ill_SVrefine2DISCOVARDovetail_11775:HG2_PB_SVrefine2PBcRplusDovetail_4268:HG2_PB_SVrefine2PB10Xhap12_11993:HG2_PB_SVrefine2Falcon2Bionano_8162:HG2_Ill_SVrefine2DISCOVARplusDovetail_5006:HG2_10X_SVrefine210Xhap12_11451:HG4_PB_SVrefine2Falcon1Dovetail_10242:HG4_Ill_SVrefine2DISCOVARDovetail_11568:HG2_PB_SVrefine2Falcon1plusDovetail_4662;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11451:HG2_Ill_SVrefine2DISCOVARplusDovetail_5006:HG2_PB_SVrefine2Falcon2Bionano_8162:HG2_PB_SVrefine2PB10Xhap12_11993:HG2_PB_SVrefine2PBcRplusDovetail_4268:HG3_Ill_SVrefine2DISCOVARDovetail_11775;NumExactMatchSVs=6;ClusterMaxShiftDist=0.15619;ClusterMaxSizeDiff=0.15619;ClusterMaxEditDist=0.238616;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=524;DistBack=16547;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=17:5526118-5526142;PctSeqSimilarity=0.9963;PctSizeSimilarity=0.9981;PctRecOverlap=0.9581;SizeDiff=-1;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=98;MatchId=2158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:1:27:0:19:1/1:2:58:1:36:1/1:0:25:1/1:4:112:.:.:.
chr17	5745333	HG2_Ill_150bpfermikitraw_20589	C	CTCGCAGTGGGGTGGGCACACCCTGCGAGATGGGGAGTAATATCATCCTCCTCTCCCCCCTGGATATTACCACCCACT	20	PASS	ClusterIDs=HG4_PB_pbsv_16486:HG4_Ill_Krunchall_22499:HG3_PB_pbsv_16211:HG3_PB_HySA_24970:HG2_PB_pbsv_16565:HG4_PB_HySA_24101:HG4_Ill_GATKHC_26163:HG4_Ill_GATKHCSBGrefine_11208:HG4_Ill_250bpfermikitraw_21520:HG4_Ill_150bpfermikitraw_20715:HG3_Ill_GATKHC_26033:HG3_Ill_GATKHCSBGrefine_10792:HG3_Ill_250bpfermikitraw_21216:HG2_Ill_Krunchall_22157:HG2_Ill_GATKHC_26202:HG2_Ill_GATKHCSBGrefine_10869:HG2_Ill_250bpfermikitraw_21859:HG2_Ill_150bpfermikitraw_20589:HG2_10X_SVrefine210Xhap12_11455:HG2_PB_HySA_30129;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20589:HG2_Ill_250bpfermikitraw_21859:HG2_Ill_GATKHCSBGrefine_10869:HG2_Ill_GATKHC_26202:HG2_Ill_Krunchall_22157:HG3_Ill_250bpfermikitraw_21216:HG3_Ill_GATKHCSBGrefine_10792:HG3_Ill_GATKHC_26033:HG4_Ill_150bpfermikitraw_20715:HG4_Ill_250bpfermikitraw_21520:HG4_Ill_GATKHCSBGrefine_11208:HG4_Ill_GATKHC_26163:HG4_Ill_Krunchall_22499;NumExactMatchSVs=13;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.322981;PBcalls=6;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=77;DistBack=351;DistForward=4110;DistMin=351;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=216;REFWIDENED=17:5745192-5745407;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:27:0|1:30:3:4:23:./.:3:8:15:0:0/1:16:11:./.:.:.:.:.:.
chr17	5911113	HG2_Ill_MetaSV_1901	C	CAAAACTTTGTATATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCGAAAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1901:HG4_PB_HySA_24106:HG4_PB_pbsv_16489:HG4_Ill_GATKHCSBGrefine_11212:HG2_Ill_breakscan11_4707:HG4_Ill_MetaSV_1970;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_MetaSV_1901:HG4_Ill_MetaSV_1970;NumExactMatchSVs=2;ClusterMaxShiftDist=0.102326;ClusterMaxSizeDiff=0.0596546;ClusterMaxEditDist=0.248062;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=24787;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=17:5911114-5911113;PctSeqSimilarity=0.952;PctSizeSimilarity=1;PctRecOverlap=0.9495;SizeDiff=0;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=96;MatchId=2161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:48:0|1:30:5:1:33:./.:23:4:24:0:0/1:39:11:0/1:13:31:.:.:.
chr17	6341633	HG2_PB_SVrefine2PB10Xhap12_11998	A	ATATGTCATTTCTTTTTTTTTTTTTTTTTTATTTTTATTTTTTCTTTTTTTAATCATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCAT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_10873:HG3_PB_HySA_24973:HG4_Ill_MetaSV_1973:HG2_PB_pbsv_16574:HG4_PB_pbsv_16495:HG3_PB_pbsv_16217:HG2_PB_PB10Xdip_13548:HG4_PB_HySA_24113:HG2_PB_HySA_30139:HG4_Ill_GATKHCSBGrefine_11217:HG2_PB_SVrefine2Falcon1plusDovetail_4668:HG2_PB_SVrefine2PBcRplusDovetail_4271:HG2_PB_SVrefine2PB10Xhap12_11998:HG2_PB_SVrefine2Falcon2Bionano_8169:HG2_10X_SVrefine210Xhap12_11460:HG3_Ill_GATKHCSBGrefine_10796:HG2_Ill_MetaSV_1904;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11460:HG2_PB_SVrefine2Falcon2Bionano_8169:HG2_PB_SVrefine2PB10Xhap12_11998:HG2_PB_SVrefine2PBcRplusDovetail_4271;NumExactMatchSVs=4;ClusterMaxShiftDist=0.169492;ClusterMaxSizeDiff=0.169492;ClusterMaxEditDist=0.279661;PBcalls=11;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=120;DistBack=16456;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=17:6341634-6341648;PctSeqSimilarity=0.9959;PctSizeSimilarity=0.9917;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:./.:0:0:0:0:./.:0:3:0:13:1/1:0:12:./.:.:.:.:.:.
chr17	6358974	HG2_PB_SVrefine2PB10Xhap12_11999	C	CAGGGGAGGGCAGGGCAGGGCAGGGCAGGGCAGCAGCGCAGGGGGAAGAAGGGAGGGGAGGGGAGGAGATGGGAGGGGGAAGAGGGGAAGGGAGGGGAGGGGGAATAGGGGAGGGGAGAGGAGGGAAGAGGGAAGAGGGAGGGGAGGGGGAAGAGGGGAAGGGAGGGGAGGGGGAAGAGGGGAAGGGAGGGGAGGGGGAAGAGGGGAAGGGAGGGGAGGGGGAAGAGGGGAAGGGAGGGGAGGGGGAAGAGGGGAAGGGAGGGGAGGGGGAAGAGGGGAAGGGAGGGGAGGGGGAAGAGGGGAAGGGAGGGGAGGGGGAAGAGGGGAAGGGAGGGGAGGGGGAAGAGGGGAAGGGGGGGAAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8170:HG2_PB_PB10Xdip_13549:HG2_PB_HySA_30140:HG4_PB_HySA_24114:HG4_PB_pbsv_16496:HG3_PB_pbsv_16218:HG4_PB_SVrefine2Falcon1Dovetail_10248:HG4_PB_SVrefine2PBcRDovetail_8264:HG3_PB_SVrefine2PBcRDovetail_7996:HG2_PB_SVrefine2Falcon1plusDovetail_4669:HG2_PB_SVrefine2PB10Xhap12_11999:HG2_PB_SVrefine2PBcRplusDovetail_4272;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11999;NumExactMatchSVs=1;ClusterMaxShiftDist=0.187311;ClusterMaxSizeDiff=0.187311;ClusterMaxEditDist=0.220877;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=361;DistBack=17325;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=137;REFWIDENED=17:6358975-6359111;PctSeqSimilarity=0.9719;PctSizeSimilarity=0.9751;PctRecOverlap=0.795;SizeDiff=9;StartDistance=-70;EndDistance=-70;GTMatch=0;TruScore=91;MatchId=2163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:18:0:14:./.:0:4:0:8:1/1:0:10:1/1:1:9:.:.:.
chr17	6931755	HG4_Ill_Krunchall_22515	C	CCTGGAGGCTGTGGGTGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAA	20	PASS	ClusterIDs=HG4_PB_HySA_24122:HG2_PB_pbsv_16578:HG2_PB_HySA_30153:HG4_Ill_svaba_20440:HG3_Ill_svaba_20637:HG2_Ill_svaba_20469:HG2_PB_PB10Xdip_13609:HG2_PB_PB10Xdip_13608:HG4_PB_SVrefine2PBcRDovetail_8267:HG3_PB_pbsv_16224:HG4_Ill_scalpel_15088:HG4_Ill_manta_3792:HG4_Ill_SVrefine2DISCOVARDovetail_11575:HG4_Ill_Krunchall_22515:HG4_Ill_GATKHC_26182:HG4_Ill_GATKHCSBGrefine_11220:HG4_Ill_250bpfermikitraw_21533:HG4_Ill_150bpfermikitraw_20728:HG3_PB_SVrefine2PBcRDovetail_8000:HG3_Ill_scalpel_15735:HG3_Ill_manta_3643:HG3_Ill_SVrefine2DISCOVARDovetail_11785:HG3_Ill_Krunchall_21748:HG3_Ill_GATKHC_26046:HG3_Ill_GATKHCSBGrefine_10798:HG3_Ill_250bpfermikitraw_21224:HG3_Ill_150bpfermikitraw_20645:HG2_PB_SVrefine2PBcRplusDovetail_4273:HG2_PB_SVrefine2PB10Xhap12_12002:HG2_PB_SVrefine2Falcon2Bionano_8172:HG2_PB_SVrefine2Falcon1plusDovetail_4671:HG2_Ill_scalpel_15447:HG2_Ill_manta_4458:HG2_Ill_SVrefine2DISCOVARplusDovetail_5014:HG2_Ill_Krunchall_22172:HG2_Ill_GATKHC_26221:HG2_Ill_GATKHCSBGrefine_10875:HG2_Ill_250bpfermikitraw_21874:HG2_Ill_150bpfermikitraw_20600:HG4_PB_SVrefine2Falcon1Dovetail_10251:HG4_PB_pbsv_16499;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20600:HG2_Ill_250bpfermikitraw_21874:HG2_Ill_GATKHCSBGrefine_10875:HG2_Ill_GATKHC_26221:HG2_Ill_Krunchall_22172:HG2_Ill_SVrefine2DISCOVARplusDovetail_5014:HG2_Ill_manta_4458:HG2_Ill_scalpel_15447:HG2_PB_SVrefine2Falcon1plusDovetail_4671:HG2_PB_SVrefine2Falcon2Bionano_8172:HG2_PB_SVrefine2PB10Xhap12_12002:HG2_PB_SVrefine2PBcRplusDovetail_4273:HG3_Ill_150bpfermikitraw_20645:HG3_Ill_250bpfermikitraw_21224:HG3_Ill_GATKHCSBGrefine_10798:HG3_Ill_GATKHC_26046:HG3_Ill_Krunchall_21748:HG3_Ill_SVrefine2DISCOVARDovetail_11785:HG3_Ill_manta_3643:HG3_Ill_scalpel_15735:HG3_PB_SVrefine2PBcRDovetail_8000:HG4_Ill_150bpfermikitraw_20728:HG4_Ill_250bpfermikitraw_21533:HG4_Ill_GATKHCSBGrefine_11220:HG4_Ill_GATKHC_26182:HG4_Ill_Krunchall_22515:HG4_Ill_SVrefine2DISCOVARDovetail_11575:HG4_Ill_manta_3792:HG4_Ill_scalpel_15088:HG4_PB_SVrefine2PBcRDovetail_8267;NumExactMatchSVs=30;ClusterMaxShiftDist=0.127273;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.263158;PBcalls=14;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=13;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=8;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=62;REFWIDENED=17:6931756-6931817;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:1:25:1:25:./.:0:17:1:16:1/1:1:46:./.:.:.:.:.:.
chr17	7167889	HG4_Ill_SVrefine2DISCOVARDovetail_11579	C	CGTGAGTCACTGCTCCCAGCCATGAACTGTTTGTTATTCGTTTTTATTGTTGTACTTTTGGATTAATGGTATGTTGCACAAATTCCTTCCATTTTTACTGATTTCTTCTTCTCCAAGTCCACGGGCATCCTATACCTCAAACCCCAGCATTTCTGGGTTTGATTTGCTATATGGGAGAGTATCTCTGTGTCTTTTGTCCACGTTATTATTTGTTATGAAAAATTATGAGCATGTTCCCTAAGACTAGGTTTTCTAGCATGGTTCCTTATGGCCAGGGCTGTGTGACTCTCAGA	20	PASS	ClusterIDs=HG4_PB_HySA_24125:HG4_PB_pbsv_16503:HG2_PB_pbsv_16580:HG2_PB_SVrefine2PB10Xhap12_12005:HG2_PB_PB10Xdip_13621:HG4_PB_SVrefine2PBcRDovetail_8270:HG4_Ill_SVrefine2DISCOVARDovetail_11579:HG4_Ill_MetaSV_1976:HG4_Ill_GATKHCSBGrefine_11222:HG2_Ill_SVrefine2DISCOVARplusDovetail_5017:HG2_Ill_GATKHCSBGrefine_10876:HG4_PB_SVrefine2Falcon1Dovetail_10254;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10876:HG2_Ill_SVrefine2DISCOVARplusDovetail_5017:HG4_Ill_GATKHCSBGrefine_11222:HG4_Ill_MetaSV_1976:HG4_Ill_SVrefine2DISCOVARDovetail_11579:HG4_PB_SVrefine2PBcRDovetail_8270;NumExactMatchSVs=6;ClusterMaxShiftDist=0.141869;ClusterMaxSizeDiff=0.138408;ClusterMaxEditDist=0.179931;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=292;DistBack=31482;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=70;REFWIDENED=17:7167890-7167959;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:0|1:22:1:2:22:1|0:0:7:14:0:0/1:20:22:./.:.:.:.:.:.
chr17	7205844	HG2_PB_PB10Xdip_13622	G	GTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGCAATCCACCCATCTTGGCTTCCCAAAGTGTTGGGATTATAGGCGTGAACCACCGTGCCCGGCTAATTTTTTAATTTTTTTTTTTTTTAAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCAATCTCCGCTCACTACAAGCTCCACCTCCCAGGTTCACGCCATTCTGCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCCACCACCACGCCTGGCTAATTTTTTTTGGTATTTTTAGTAGAGATGGGATTTCACCGTGTTGGCTAGGCTGGTCTCGAACTCCTGACCTCATGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAGTGCGCCCGGCCGCCAGGATGCATCTTAAAAACACATTGCTTAGAGAAAAAGGGTAAGAAACAGGATGAGACATATACAACAGGCTGGGGGCGGTGGCTCACACTTATAATCCCAGCACTTTGGGAGGCCGAGGTGGGATGATTGTTTGCAGCCAGGAGTTTGAAACCCGCCTGGGCAACATAGGGAAACTCCGTCTCAACAAATAATTTAAAAAATTACCCAGGCATGGTGGCACACAGCTGTAGTCCCAGCTACTTGGGAGGGGCTGAGGTGGGAAGATTGCTTGGGCCTGGGAGGTCAAGGCTGCAGTGAGCTATGATCCTGCCACTGCACTCCAGCCTGGGTGACACAGCCAGACCCTGTCTCAAAAAAAAAGCAAAAAAACATATACAATGATATGACATACATAAAAAGAATCATTCCCACAAACAACAAACCATGTCTCTCAGAGTATATCAAAACCAAAAGACGTGCAACATTGTAATTGCTTGTGGAGGAGCAGGGAAGTAAATGGGGTTGGGGGTGTTAAAAAAGCAAAAAATCAAGCAAACGTAGGAATGAATGAAATGTTCTATCCTGCTTAAAACTCTCCAGTGACTTCCCATTGAAAACTCATAGGTGAAGCTCAAGCCCTTTAGCTTAAATCTAAAGGCCCAAGATCTAACCCACTGCCACCCTACCCACCCAGGTCTCAAGCACTGCCTCCTGACCAGTCTTGCTGACATTGCTACATGTGGCTATTTCAGTTTAATTAAAATAAAATTTAAAATTCAGTTCCTAAGTCTCACCAGCCACATTTCAAAAGCTCAATAGCCATATGAGGCTCTTGGATACTGTATTAGCACAAATAGAGAACATTTCTGCCCTCAAAGGTCTAGCAAACAGCACTACTATTCAACCAACTCTATTTTTTATTTTTATTTTTTTTGAGACAGGGTCTCATTCTGTCGCTCAGGCTGGAGTGCAGTGGCACAATCACGGCTCACTGCAGCCCTGACCTTCCCAGGCTCACATGATCCTCCCACCTCAGCCTCTGGAGTAGCTGGGACTACAGGTTTACACCACTACCCCCAGTTAATTTTTCTAGTTTTGGTAGAGACAGGTTTCACCATGTTGCCCAGGCTGGTGTCCAGCTCCCGGGCTCAAGTGATCCACCCACCCTCGCCTCCCAAAGTATTAGGATTATAGGCATGAGCCACCGTGCCTGGCTTCAACCATCTCTGTAAATCTCAGTACTCAGGATACTAAATCTTCTGTTCTAAAAGTTTCAGAAATCGTTTCTTATTTGAATTAATTTCACTGAGATTTCTTGAGTGCTTTCCTCTGACCATCTGGACTGGGAGACAAGTGCACCAGTAACTACCATGATAATCTCAGTGCTGGTTAGCAACTGCGTGGGTCACCTTCTGAAAATATTTCACATAGTTTACAATAAAATATGCATATTCCTTTATTTCTTCAACAAACATTTATTGAGCACCTACTGTGTGCCAGGTGCTAAAACGTGCTAAGGTATCGTAGTGAATTAGACATACAAGATCCCTGTGGCAGGCCGGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGAAGGCCAAGGCGGGCAGACCATCAGAGGTCAGGAGTTTGAGACCAGCCTGATCTACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCATTTGAACCTGGGAGGCAGAGGTTGCAGTGACCCAAGATTGCACCACTGCACTCCAGCCTGGGTAACAGAGCGAGAGTCCTGTTGCTCAGGCTGGTCTTGAACTTCAGGCCTGAAGCAATCCTCCTGCCTCAGCCTCCAGAATAGCTGAGATTATAGGCATGAGCAACTATGCCTGGCAGTTTTCAATAATATCTGAATTCTAATCATGGTAAGTGGGTGTAGCCACAAGGAAGTAGGAAATAAATGTGTATGTCTTTAAGACAAGATAGAACCCGATCAATTGTGTTTGAATTTTTTCTTTTCTCTTTCTTTCTTTCTCTTTCTCTCTCTCTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTGATGAAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCGATCTCGGCTCACCGCAACCTCCGCCTACCGGGTTGATTCTCCTGCCTCAGTCTTCCGAGTAGCTGAGATTACAGGCATGTACCACCATGCCCAGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGATGATCCACCTGCCTCAGCCTCCCAAAGCGCTGGGATTACAGGCATGAGCCACAGCGCCCGGCCCGCCCTCCCTTCCCTCCCTCCCTCCATCGTCCCTCCCTCCCTCCCTTCTTTCTTTCTTTTTTTTTTTTTTAAGACAGAGTTTCTCTCTTGTTGCCCAGGCTGGAGTGCAATGGCACAAGCTCAGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTTGCCATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4673:HG2_PB_pbsv_16581:HG4_PB_pbsv_16504:HG3_PB_HySA_24989:HG2_PB_HySA_30160:HG4_PB_HySA_24127:HG2_PB_PB10Xdip_13622:HG2_PB_PB10Xdip_13623:HG3_PB_HySA_24988:HG3_PB_pbsv_16229:HG2_PB_HySA_30159:HG3_PB_assemblyticsfalcon_10424:HG2_PB_assemblyticsPBcR_10041:HG3_PB_SVrefine2PBcRDovetail_8003:HG2_PB_SVrefine2PB10Xhap12_12006:HG4_PB_SVrefine2PBcRDovetail_8271:HG2_PB_SVrefine2Falcon2Bionano_8174:HG4_PB_SVrefine2Falcon1Dovetail_10255:HG2_PB_SVrefine2PBcRplusDovetail_4275;NumClusterSVs=19;ExactMatchIDs=HG2_PB_PB10Xdip_13622;NumExactMatchSVs=1;ClusterMaxShiftDist=0.154811;ClusterMaxSizeDiff=0.154811;ClusterMaxEditDist=0.201683;PBcalls=19;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=3034;DistBack=13;DistForward=218;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=161;REFWIDENED=17:7205780-7205940;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9984;PctRecOverlap=0.9987;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:79:1/1:0:30:2:14:./.:0:2:1:2:./.:2:22:1/1:8:383:.:3061:.
chr17	7281596	HG3_Ill_150bpfermikitraw_20650	G	GAGAAAGAAAGAAAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12008:HG3_Ill_Spiral_16934:HG3_Ill_GATKHC_26050:HG3_Ill_GATKHCSBGrefine_10800:HG3_Ill_FB_14036:HG3_Ill_150bpfermikitraw_20650:HG2_Ill_manta_4459:HG4_Ill_150bpfermikitraw_20733:HG3_PB_SVrefine2PBcRDovetail_8005:HG3_Ill_SVrefine2DISCOVARDovetail_11791:HG2_10X_SVrefine210Xhap12_11463:HG2_PB_SVrefine2PBcRplusDovetail_4277;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_manta_4459:HG3_Ill_150bpfermikitraw_20650:HG3_Ill_FB_14036:HG3_Ill_GATKHCSBGrefine_10800:HG3_Ill_GATKHC_26050:HG3_Ill_Spiral_16934;NumExactMatchSVs=6;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.189474;PBcalls=3;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=51;DistBack=13;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=101;REFWIDENED=17:7281553-7281653;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:27:./.:9:12:2:11:./.:5:2:1:10:0/1:14:6:./.:.:.:.:.:.
chr17	7741739	HG2_PB_SVrefine2PB10Xhap12_12010	ATAGAAGGGGGAGGAAG	GGCAGAGGCTGCAAGCGCCGGGGCAGGCCCAGGAGGCAGAGGAGGGACCGTCTCCCCCGCCCCCCCAGCCCCCACTCCCCCCCTGCTGCTTCCCCCCCTCCCTACCCGGACTCCGGGGGCACCGCCGGGGGACAGACACCCAGCAGGTAACCCCGGCCTGGCTCGCCCTCCCCTCTCTGATTTTCCTCCACACCTTCCCGGATGACCCCTTTTCCCCTTTCCGTCTCCCCGTTTCTCCCCGGCCTTGCCTCTTTTCCCTGGCCTTCCTTGTTCCATCGCCCCCACTTGGGCTTATCGCCCGCTGGCCGCGCCGGCGTCTCGTGCAGCCTGATTCCCTTCTCGCCCGACAGCCTGTGCGCCCTAGGTCTGCCCAGGGCACCTTTTGGGGCTCTGTCTGGCTGCTGCTTTGGGCTCTTGCTTCCCTTCCGACCTGTCCCCTGGGGCTGTCGGGGAGGAGGGAGTCCCTGCCTTTTCTTGCTCCCCCCCAGTTCCCCGCCTCCCCAACTCTGGCCCCCTTTCTCCTTCTAGCAGTCTCTAGGGGTGGGGAGAGAACCGGAATTTAGGGGGCCCCCTGGAGGGGCAAGGGGCTCTGGGTCGCTGGGGAAAGGGTCTGTGAGTGTGTGTAGGGTGGGGGTGGGGGGGCAGTTAGAGACCTGGCTGCCTCTCCGTTGTCCCTTTAAATGGCCCTCACATTTCTGGGGACTCATGGGGGGGAGGTGGCAAGCCGCCTGCCTGGGGGGCAGGGCCCTTGGTTCGTCCACACAATCAGGGGTGGTAATGATTTAAAGGGACAGCCTCGGTGTGGCCGCTGCCACCCTGCGCCGGCGGGAGGGGGAGCCGGCAGGCCATGTCTGGGGAGGCTTGGCTGGTGAGCAGGGCATTTGAGGCTGAGTCTGTTGCTGGGCCTGCCAGGTCTGGGACAGTGCTGCGGCTGGGAAGGTGCAATGAGGGGTGACAGCCTGCCTGGGGGGTACACAGCCTGGGCTTTTTCCAGGGCCCCACCTTTGGGTCCACCGACTCCTTGGCCAAGAATCCTTGAGTCCAAACTATGGAGTCTGTCGGCCACCAGGTGAGGGGCCACCGGCTGGTCTGCAGGTCAGGGGTCTGGCCTGGGCAGTTTGGAGCTGGCACTTCAGCTTCCCCTTTTGTTGTTTGGCTCTGTGCACAAGAAAGCCCCAGCCCCTCCCCCAGCCCAGCTCCCCCTTCCCGTCCACATGCCCCCCCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8176:HG4_PB_pbsv_16505:HG2_PB_pbsv_16584:HG3_PB_pbsv_16234:HG2_PB_SVrefine2PBcRplusDovetail_4279:HG2_PB_SVrefine2PB10Xhap12_12010:HG4_PB_SVrefine2Falcon1Dovetail_10259:HG4_Ill_SVrefine2DISCOVARDovetail_11580:HG4_PB_SVrefine2PBcRDovetail_8272:HG2_Ill_SVrefine2DISCOVARplusDovetail_5019:HG3_PB_SVrefine2PBcRDovetail_8007:HG2_10X_SVrefine210Xhap12_11465:HG3_Ill_SVrefine2DISCOVARDovetail_11796:HG2_PB_SVrefine2Falcon1plusDovetail_4676;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12010:HG2_PB_SVrefine2PBcRplusDovetail_4279;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0496137;ClusterMaxSizeDiff=0.0496137;ClusterMaxEditDist=0.21779;PBcalls=10;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=1209;DistBack=-5;DistForward=-11;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:7741756-7741738;PctSeqSimilarity=0.9914;PctSizeSimilarity=0.9934;PctRecOverlap=0.9902;SizeDiff=-8;StartDistance=-16;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:90:./.:0:22:0:4:./.:0:3:0:7:./.:0:2:0/1:12:75:.:1386:.
chr17	7958075	HG4_PB_pbsv_16506	T	TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAAGTCTCGCTCTGCTTGCCCAGGCTGGATGCAGTGGCCGATCTCGGCTAACTGCAAGCATTCCGTCCTCCCGGGTTTCACGCCATTCTCCTGCTCAGCCTCGCGTAGCTGGGACTACAGGCCGCCACCGACCCGCTTAATTTTTGTGTGTTTTTTTTAGTACAGACGGGGGTTTCACTGTGTTAAAGCCAGAAATGGTCTCGATTCGCTGACCTCAGTGAATCCGCCGCCTGGCCTCCCCAAAAGTGCATGGGATTACAGGCGTGAGCCACCGCGCCCGCCTCTGCTAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10264:HG2_PB_pbsv_16585:HG4_PB_SVrefine2PBcRDovetail_8273:HG4_PB_pbsv_16506:HG4_PB_SVrefine2Falcon1Dovetail_10260:HG3_PB_assemblyticsfalcon_10432:HG2_PB_SVrefine2Falcon1plusDovetail_4677;NumClusterSVs=7;ExactMatchIDs=HG4_PB_pbsv_16506;NumExactMatchSVs=1;ClusterMaxShiftDist=0.16242;ClusterMaxSizeDiff=0.16242;ClusterMaxEditDist=0.245955;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=319;DistBack=-10;DistForward=5;DistMin=-10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=17:7958076-7958085;PctSeqSimilarity=0.9367;PctSizeSimilarity=0.9938;PctRecOverlap=0.9626;SizeDiff=-2;StartDistance=11;EndDistance=11;GTMatch=0;TruScore=96;MatchId=2169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:24:0|1:35:1:0:20:./.:2:2:9:0:0/1:26:4:0/1:10:7:.:.:.
chr17	8312642	HG2_Ill_SVrefine2DISCOVARplusDovetail_5022	T	TTGTTGGCCGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACCTGAAGTCAGGAGTTCGAAACCAGCCTTGACCATCATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCATCATGGCATCCACCTGTAAATCCCAGCTACTAGGGAGACTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGGGGTTGCAGTGCACTGAGATGGCGCCATTGCACTCCAGCTTGGGCAACAAGAGTGAAACTCCATCTCAAAAAAAAAAAAAGTCTGCAATAAGTGTTTTTACTGCGATATATTGGTGGTATTTCCTTAAAATAAATTACTAGCAATGGAATCGATAGCTCAAAGGATAATATTGTTTTAAAGCCTTGTGATAAATATTGTAAATTTGCCTTTTAGGAAGGTTGTGCCAATTTGGACTCCCTTCAGCGGTATATGAAATTGTCCTTTGTTGTCACCCCCACCCACCTTGCCTGGATATTATTATAACTTTATCTTTATCAAAAGTAAAGAAATCTGAAAGTCATCCACCTCTCTGTCATCAGGGTCAGTATCCTAGCTTAAGGCATTATCATCAGCTTATTTGGAATTCTGCAATAGCCTGTTCACTTCGTTTTCTGCTTCTACTCTCTTCCCTCATGGTCTTCTCCAGAATGATCAGAGTTCACTCTCTCTTTTTTTTTTTTTTTGAGACGGAGTTTTGCTCTTGTTGCCCAGGCTGCAGTGCAATGGTGCGATCTCGGCTCACCGCACCCTCCACCTCCTGGGTTCAAGCGATTCTCCCTCCTCAGCCTCTTGAGTAGCTGGGATTACAAGCATGCGCCACCATGCCCGGCTAATTTCATATTTTTAGTAGAGACGGGGTTTCTCCATGTTAGTCAAGCTGGGCTCGAACTCCTGACCTCAGGCAATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTATAGGAGGGAGCCACTGCGCCCAGACTAGAAGTCTCATTTTAAAAAATATGCATCCATTGCCTTTTGCTTTGGTCATGACAGACTTGCTTGGATCAGATTAGGATTCTTTTAGAGGACAATGTAAAAATTAGATCTCTCTCTCTTACACACACACACACACTCTCTCTCACACACACACACACACACACACACACACACACACACACACACACACACACTCGGCTGTTTTAAGGCATCAGAAAGCAATCAGCATGTGTGGAATTAAATAACCAGAATTGTGAAGAGAAGGGAACCACTTTGAGGTCAGGGGATATTCTCCACTGCTTTTGACTCTCAAGAAATTTGCCAATTTGCTTGGGAGATATTGAGGCTGTGCAGAAAAGGGTAACCTAAAGCTTGGGCAATATCACAGGGCTCAAAAATTGGAATCCAAGGCAAACAGAATTTAAGGAACTAAGATCCTGGGGAAAAGGGCATAAGAGAGGTGAGCCCCAAATTCCATGTAGTTTTTTTTCTCAGAAAATTTGCCAAATCATATTCTCCGCATGTGCTGGGGTGAGGGGGAGGGGCAGAAGCAAAGCAGAAAGCTACTCAAGCTGAGGCTCGCTTTTGGGCTTTTCAGCGTGGTGAGAATTTAAAAATTGGAGTTCAGGGTCTCATAAGAAGAATGTGGTAAACGCCCTAGGGTTTCAGAGAGAGTCCTACAGGATCACAACCTAGGAATCAGGGCAATCCAGAAATAGACCAGCCCACACAAAGCCAGCAACATCTCAATTCCTCATTGGAGTAAATGATTTGACCCTACTCTAATGGGCTGGGAAAAAAAAAAGAAATTTACATATTTTCTGGAGAAGAACATCATCCAGAGCCTCTACAATTTTTCTTTTAGCTCCAACATGTAAGTGATAATGCAATTTTTCATTCTACTCAGCATTCAATATTTAACAAAAATTAGCAGATATGCCAGGAGACAAGACCAAATAAACAAAAAGCAAGAAAAAATCAGAACCAGATCTAAAGGAGAACAAGGTATTAGTATTATCATATTTGAACTCTTATACACTGAAGAAAGTAGATAGGGGTGGGGTACAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCACTTGAGGACCCGCCTGGCCAACACAGCAAAACCTTGAGTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGTACATGCCTGTAATCCCAGCTACTCAGGAGGCTGCGGCATGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGTGCCATTGCACTCCAACCTGGGTGACACAGTGAGACTCTGTCTCAAAAAAAAAAAAGAAAAAAGTAGATAGCTAGAAATTAGTTTTAAAAAGAATTAAATGGTAATTCTGGAACAAAAAACCTACTCACTAAGATGTAAAAAACCCTCTATAGATAGGTTTAACAGCAAATTAGATACAACAGAAGAAAGGATTCATAAATGAATGACAGGTGAGTGGAAAATATTCGGTCTAAAGTATGGAGCAGGAAAACAGGTGGAAAATACATAAAAGAGCATAAGAGCATATGGAACATGGTGTAAAGGTCTACATACATTTAATTGGAATCACTTAGATACAGGAGAATGAGTGGCTGGGTCAGAGGTAATAGTTGAGGAGTTACTGACTATGAATTTTACAATATTAATGAAAGACATTAAACTACACATTCATGAAACTCTATAACTCTTCAGAAAAAAAAAATTCCACACCCAGGAGCATTGTAGTAAAACTTCTAAGAACAAAGACAGAGAATTCTTAAAAATCGGCGGGGGAGGAGCCAGGTACAGTGGTGAGAACCTGTAGTCCCAAAATACTAGGGAGGCTGTGGCAGGAGGACTGCTTGAGCTGAGGAGTTCAAGGCCAACTTGAGCAACATAGTGACACCCAGTCTCTTAAAAAAAAAAAAACTGGGCCAGGCGCGATGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGAGATGGACAGATCACTTGAGATCAGGAGTTTGAGAGCAGCCTCGCCAACACGGTGAAGGCCTGTCTGTACTAAAAATACAAAAATTAGCTGGGTATGATGGTAGGCGCCTGTAATCCCAGCTACTTGGGAGGGTGAGGCAGGAGAATCCCTTGATCCTGGGAGGTGGAGGTTGCAGTGAGCCAAGATTGCATCACTGCACCCCAGCCTGGGCAACAGAGTGAAATTCTGTCTTTAAAAAAAAAAAATCAGTTGAGGAAAAAAAAAGACACGTTATCTTTGGAGAAGCAAGCATAATTCTTTCAAGATAAATGATGGAAATCAGCAGACAATGGAAGTCAAGGATGCACATTTTAATCTTTAAAGGGCTGAAGGAAAATAGCTGCCAATCTAGAATTTTCTACACAAAAAAATGTTCTTCAAAAATAAAGGTGGGCAAGCCAGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACCTAAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCTGTTTCTAGTAAAAATACAAAAATTAGCCGGGCATGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGATGCAGGAAAATAGCTTGAACCCGGGAGGTGGAGGCTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGATTCTGTCGCAAAAAAAAAAAAAAAAAAAAAAAGATTAAAGAAAAAAGAAAGGTGGGCTATAGAGGTTTACAAATGAAGACAGAGATAATTTATTGCCAAATGAGCCTTACTAAAAGAAATACTAAAGAAGTTATTCAGGCAGAAAGAAAACAATCCAAGGGCAGCACAGAAATGCAGGAATGAATGAGTGAAAAGACGTAAATAGGTGGGGAAAATATATGAATATTGACCATATAAAACAATTAGAGTGTCTTAGGAATTAAAAAATATATGAGGAATTCCATGACTACAATAGCCAAAAGGTAAGAGGGAAATAGTGGAGTTAAATTGTTGTAAGCTTCTTGCATTACCTTGGGAGTGGTAAAAGTATGAATTATAGTGGTCTACTAATTTAATAATGAATGTCATAATCTCTAAGGTAACCATTAAGAGAATAATACAAGAATGCATAATTAAAAAGCTAATGGGGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGAGGACTGCTTGAGGTTGGGAGTTTGAGACCAGCCTGGCCAACGTGGCAAAACCCCATCTCTACTAAAAATACAAACATCAGCCGGGCACGATTGTGCGTGCCGGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAATAGCTTGAACAGGAGGCAGAGGTTGCAGTGAGCCAAGGTCGTGCCAGACTCCATTAAAAAAAAAAAAAAGAAGCAGCTAATGGGGAAATGGAGTAATTCTAAAAATCTGATTATTTCAAAAGAGGGTAAGAAAGGGATAAAATAAGTAAATTTCCTAAAAATGTTTTTGACTATTTGCATTCTTCTGCTATGAACTTATCTGTGTCTTTTCCGTAGTTATCTATTTGGATGCTTTCCTTTTCTTATTGGTTTAAAATAGATATAAATACAGGTAAATAGAAATATGCCCA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5022:HG3_PB_SVrefine2PBcRDovetail_8010:HG4_PB_SVrefine2Falcon1Dovetail_10262:HG2_PB_PB10Xdip_13848:HG2_PB_HySA_30178:HG2_PB_SVrefine2PB10Xhap12_12015:HG3_PB_HySA_25005:HG2_PB_SVrefine2Falcon1plusDovetail_4679:HG2_PB_assemblyticsPBcR_10053:HG3_PB_assemblyticsfalcon_10439:HG3_PB_SVrefine2Falcon1Dovetail_10265:HG2_PB_SVrefine2Falcon2Bionano_8178:HG2_PB_SVrefine2PBcRplusDovetail_4282:HG4_PB_SVrefine2PBcRDovetail_8275:HG4_Ill_SVrefine2DISCOVARDovetail_11583;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5022:HG4_Ill_SVrefine2DISCOVARDovetail_11583;NumExactMatchSVs=2;ClusterMaxShiftDist=0.217498;ClusterMaxSizeDiff=0.217498;ClusterMaxEditDist=0.359672;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=4670;DistBack=8344;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=451;REFWIDENED=17:8312643-8313093;PctSeqSimilarity=0.9981;PctSizeSimilarity=0.9991;PctRecOverlap=0.9373;SizeDiff=4;StartDistance=-291;EndDistance=-291;GTMatch=0;TruScore=97;MatchId=2170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:26:0|1:28:0:0:14:1|0:0:20:13:0:0/1:12:18:0/1:146:260:.:4756:.
chr17	8808561	HG4_Ill_SVrefine2DISCOVARDovetail_11586	C	CCTTTACTTAAATAGCCTCATTACAGGTAAATGTTTATTTTTTGAGGGCGGATTCAATGGTCTTCAGTGTTATGTTACGGATAATGGTCTTCAATGCCTAAACCAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12019:HG3_PB_HySA_25011:HG3_PB_pbsv_16241:HG4_PB_SVrefine2Falcon1Dovetail_10266:HG4_PB_pbsv_16514:HG4_Ill_SVrefine2DISCOVARDovetail_11586:HG2_PB_SVrefine2PB10Xhap12_12020:HG4_Ill_MetaSV_1979:HG4_Ill_GATKHC_26212:HG4_Ill_GATKHCSBGrefine_11233:HG3_Ill_MetaSV_2049:HG3_Ill_GATKHC_26073:HG3_Ill_GATKHCSBGrefine_10807:HG2_PB_SVrefine2Falcon1plusDovetail_4682:HG2_Ill_manta_4462:HG2_Ill_MetaSV_1908:HG2_Ill_GATKHC_26253:HG2_Ill_GATKHCSBGrefine_10884:HG2_PB_PB10Xdip_13859:HG2_PB_PB10Xdip_13858:HG2_PB_HySA_30190:HG4_Ill_GATKHC_26211:HG4_Ill_GATKHCSBGrefine_11232:HG4_PB_HySA_24149:HG4_PB_SVrefine2PBcRDovetail_8279:HG3_Ill_SVrefine2DISCOVARDovetail_11804:HG2_PB_SVrefine2PBcRplusDovetail_4285:HG2_10X_SVrefine210Xhap12_11474;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10884:HG2_Ill_GATKHC_26253:HG2_Ill_MetaSV_1908:HG2_Ill_manta_4462:HG2_PB_SVrefine2Falcon1plusDovetail_4682:HG3_Ill_GATKHCSBGrefine_10807:HG3_Ill_GATKHC_26073:HG3_Ill_MetaSV_2049:HG4_Ill_GATKHCSBGrefine_11233:HG4_Ill_GATKHC_26212:HG4_Ill_MetaSV_1979:HG4_Ill_SVrefine2DISCOVARDovetail_11586:HG4_PB_SVrefine2Falcon1Dovetail_10266;NumExactMatchSVs=13;ClusterMaxShiftDist=0.23;ClusterMaxSizeDiff=0.22;ClusterMaxEditDist=0.26;PBcalls=13;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=105;DistBack=-55;DistForward=19;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=89;REFWIDENED=17:8808528-8808616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:38:0|1:23:0:1:37:1|0:1:22:6:0:0/1:21:25:./.:.:.:.:.:.
chr17	9317305	HG2_PB_SVrefine2PBcRplusDovetail_4287	A	ATCCACCCACCTACCCATCTGTCCATCCATCCATCCATCCATCCAACCATCTATCTGCCCGTCCGTCTGTCCATCCATCCATCCACCCATCTGTCCATCCACCCACCCGCCCAACCCACCTATCAACTCAACCATCCACCCATCTATCCAGCCAATCATCCATCCACCCACCTACCCATTTGTCCGTCTGTCCGTCCGTCCATCCATCCATCCATCCGTCTATCCACCCATCTGTCCATCTACCCACCCACCCACCCACCTGTCTATCTAGCTAATCATCCATCCACCCACATACCCATCTGTCCATCCATCAATCCATCCATCCATCCATCCGTCCATCTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11475:HG4_PB_pbsv_16517:HG2_PB_PB10Xdip_13944:HG2_PB_pbsv_16595:HG2_PB_PB10Xdip_13943:HG2_PB_HySA_30197:HG4_PB_HySA_24155:HG2_PB_HySA_30196:HG2_Ill_MetaSV_1909:HG3_PB_HySA_25017:HG2_PB_SVrefine2Falcon2Bionano_8182:HG2_10X_SVrefine210Xhap12_11476:HG2_PB_SVrefine2Falcon1plusDovetail_4683:HG4_PB_SVrefine2PBcRDovetail_8281:HG4_PB_SVrefine2Falcon1Dovetail_10268:HG3_PB_SVrefine2PBcRDovetail_8015:HG3_Ill_SVrefine2DISCOVARDovetail_11806:HG2_PB_SVrefine2PBcRplusDovetail_4287:HG2_PB_SVrefine2PB10Xhap12_12022:HG2_Ill_SVrefine2DISCOVARplusDovetail_5026;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11475:HG4_PB_SVrefine2PBcRDovetail_8281:HG4_PB_SVrefine2Falcon1Dovetail_10268:HG3_PB_SVrefine2PBcRDovetail_8015:HG3_Ill_SVrefine2DISCOVARDovetail_11806:HG2_PB_SVrefine2PBcRplusDovetail_4287:HG2_PB_SVrefine2PB10Xhap12_12022:HG2_Ill_SVrefine2DISCOVARplusDovetail_5026;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0617647;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.203438;PBcalls=15;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=341;DistBack=44506;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=104;REFWIDENED=17:9317306-9317409;PctSeqSimilarity=0.9728;PctSizeSimilarity=0.9883;PctRecOverlap=0.7507;SizeDiff=4;StartDistance=-83;EndDistance=-83;GTMatch=0;TruScore=90;MatchId=2172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:0:18:1:32:./.:4:43:1:28:1/1:0:8:./.:1:17:.:.:.
chr17	10010721	HG3_Ill_250bpfermikitraw_21258	G	GGTCCAGTGGTGGCAGGCTGGGAAGGAGAAGTAGCTTATATACAGTCCAGTGGTGGCGGGCTGGGCAGGAGAACTGCCTTACACACA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_21912:HG2_10X_SVrefine210Xhap12_11479:HG4_PB_HySA_24162:HG4_PB_pbsv_16520:HG4_Ill_GATKHC_26228:HG4_Ill_GATKHCSBGrefine_11247:HG4_Ill_250bpfermikitraw_21568:HG3_Ill_250bpfermikitraw_21258:HG2_Ill_GATKHC_26271;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21912:HG4_Ill_GATKHC_26228:HG4_Ill_GATKHCSBGrefine_11247:HG4_Ill_250bpfermikitraw_21568:HG3_Ill_250bpfermikitraw_21258:HG2_Ill_GATKHC_26271;NumExactMatchSVs=6;ClusterMaxShiftDist=0.129032;ClusterMaxSizeDiff=0.129032;ClusterMaxEditDist=0.26455;PBcalls=2;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=86;DistBack=4;DistForward=18;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=727;REFWIDENED=17:10010722-10011448;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2173.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:22:./.:15:4:11:18:./.:3:14:10:0:0/1:21:7:./.:.:.:.:.:.
chr17	10138716	HG2_PB_SVrefine2PBcRplusDovetail_4291	C	GAAGAACTGTAATAGAAGATGAAACATGGCTCCACCAGTATCATCCTGAAGACAAAACACAGTCATAGCAATGACTACCAAAAGATGGAAATGAAGACTAGTTGAGAGCAAAGTCCATGGCAGTAGTTTTTTTGGGATACTCAAGGCATTTTTGTTGGAT	20	PASS	ClusterIDs=HG3_PB_pbsv_16248:HG3_PB_assemblyticsfalcon_10458:HG3_Ill_SVrefine2DISCOVARDovetail_11807:HG2_PB_SVrefine2PBcRplusDovetail_4291:HG2_PB_SVrefine2PB10Xhap12_12025:HG2_PB_SVrefine2Falcon2Bionano_8185:HG2_PB_SVrefine2Falcon1plusDovetail_4686:HG2_Ill_SVrefine2DISCOVARplusDovetail_5029:HG2_10X_SVrefine210Xhap12_11480:HG4_PB_SVrefine2Falcon1Dovetail_10272:HG4_Ill_GATKHCSBGrefine_11248:HG3_Ill_GATKHCSBGrefine_10812:HG2_Ill_GATKHCSBGrefine_10892:HG3_PB_HySA_25025:HG4_PB_HySA_24164:HG2_PB_pbsv_16599:HG2_Ill_breakscan11_4709:HG4_PB_pbsv_16521:HG3_Ill_MetaSV_2051:HG2_Ill_MetaSV_1910;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11480:HG2_Ill_SVrefine2DISCOVARplusDovetail_5029:HG2_PB_SVrefine2Falcon1plusDovetail_4686:HG2_PB_SVrefine2Falcon2Bionano_8185:HG2_PB_SVrefine2PB10Xhap12_12025:HG2_PB_SVrefine2PBcRplusDovetail_4291:HG3_Ill_SVrefine2DISCOVARDovetail_11807:HG3_PB_assemblyticsfalcon_10458;NumExactMatchSVs=8;ClusterMaxShiftDist=0.1125;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.233533;PBcalls=11;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=159;DistBack=-1;DistForward=13620;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:10138717-10138715;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9814;SizeDiff=-1;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:1/1:3:18:0:18:1/1:0:14:0:11:1/1:0:8:./.:.:.:.:.:.
chr17	10509614	HG2_Ill_150bpfermikitraw_20643	T	TTAATTATTAATAATTAATTATTATTAATTAATAATTATTAATAATTAATTATTATTAATTAA	20	PASS	ClusterIDs=HG2_PB_pbsv_16601:HG3_PB_pbsv_16250:HG2_PB_HySA_30210:HG4_PB_pbsv_16523:HG2_PB_PB10Xdip_12924:HG4_Ill_svaba_20473:HG4_Ill_Krunchall_22556:HG4_Ill_GATKHC_26234:HG4_Ill_GATKHCSBGrefine_11250:HG4_Ill_250bpfermikitraw_21573:HG4_Ill_150bpfermikitraw_20771:HG3_PB_HySA_25028:HG3_Ill_svaba_20668:HG3_Ill_Krunchall_21788:HG3_Ill_GATKHC_26091:HG3_Ill_GATKHCSBGrefine_10814:HG3_Ill_FB_14069:HG3_Ill_250bpfermikitraw_21262:HG3_Ill_150bpfermikitraw_20687:HG2_Ill_svaba_20501:HG2_Ill_Krunchall_22212:HG2_Ill_GATKHC_26274:HG2_Ill_GATKHCSBGrefine_10894:HG2_Ill_FB_14121:HG2_Ill_250bpfermikitraw_21915:HG2_Ill_150bpfermikitraw_20643;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20643:HG2_Ill_250bpfermikitraw_21915:HG2_Ill_FB_14121:HG2_Ill_GATKHCSBGrefine_10894:HG2_Ill_GATKHC_26274:HG2_Ill_Krunchall_22212:HG2_Ill_svaba_20501:HG3_Ill_150bpfermikitraw_20687:HG3_Ill_250bpfermikitraw_21262:HG3_Ill_FB_14069:HG3_Ill_GATKHCSBGrefine_10814:HG3_Ill_GATKHC_26091:HG3_Ill_Krunchall_21788:HG3_Ill_svaba_20668:HG3_PB_HySA_25028:HG4_Ill_150bpfermikitraw_20771:HG4_Ill_250bpfermikitraw_21573:HG4_Ill_GATKHCSBGrefine_11250:HG4_Ill_GATKHC_26234:HG4_Ill_Krunchall_22556:HG4_Ill_svaba_20473;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0472441;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.28125;PBcalls=6;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=17:10509615-10509667;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2175.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:./.:0:4:0:1:1/1:0:8:0:13:1/1:0:57:./.:.:.:.:.:.
chr17	10642199	HG2_PB_SVrefine2PBcRplusDovetail_4293	A	ACCCTCCCTCCCTCCCTCCCTCTCCTCCCTCCCTCCCTTCCTCCCTTCCTCTCCTCCCTCCCTCCCTTCCTCTCCTCCCTCCCTTCCTCTCCTCCCTCCCTCCTTCCCTCCTTCCCTCCCTTCCTCTTCTCTCTTCCACTCTCCGTCCCTTCCTCCCTCCCTCCCCTCCCTTCCTCCCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10274:HG3_PB_HySA_25029:HG2_PB_pbsv_16602:HG3_PB_pbsv_16251:HG2_PB_PB10Xdip_12925:HG4_PB_pbsv_16524:HG4_PB_SVrefine2PBcRDovetail_8285:HG2_PB_SVrefine2PBcRplusDovetail_4293:HG2_PB_SVrefine2PB10Xhap12_12027:HG2_PB_SVrefine2Falcon1plusDovetail_4688;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4688:HG2_PB_SVrefine2PB10Xhap12_12027:HG2_PB_SVrefine2PBcRplusDovetail_4293:HG4_PB_SVrefine2PBcRDovetail_8285;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0648649;ClusterMaxSizeDiff=0.0648649;ClusterMaxEditDist=0.285714;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=178;DistBack=9013;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=154;REFWIDENED=17:10642200-10642353;PctSeqSimilarity=0.9611;PctSizeSimilarity=0.9622;PctRecOverlap=0.2324;SizeDiff=-7;StartDistance=-139;EndDistance=-139;GTMatch=0;TruScore=71;MatchId=2176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:42:./.:2:13:0:3:./.:1:4:1:13:./.:0:2:./.:.:.:.:.:.
chr17	10658945	HG3_Ill_GATKHC_26092	C	CTCCCTCCCTCTCTCCCTTTTTCTCTCTCCCTCTCTACTCCCTCCTCCTTTGTCTCTTTCTCTTCCTTCTTCTCTTTTTCCCCCTCTTCCTT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_20644:HG3_PB_assemblyticsfalcon_10461:HG2_PB_PB10Xdip_12926:HG3_PB_HySA_25030:HG4_PB_HySA_24166:HG4_PB_pbsv_16525:HG2_PB_HySA_30215:HG2_PB_pbsv_16603:HG3_PB_pbsv_16252:HG4_Ill_GATKHC_26235:HG4_Ill_GATKHCSBGrefine_11251:HG4_Ill_250bpfermikitraw_21574:HG4_Ill_150bpfermikitraw_20772:HG3_Ill_GATKHC_26092:HG3_Ill_GATKHCSBGrefine_10815:HG3_Ill_250bpfermikitraw_21263:HG3_Ill_150bpfermikitraw_20688:HG2_Ill_GATKHC_26275:HG2_Ill_GATKHCSBGrefine_10895:HG2_Ill_250bpfermikitraw_21916;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20644:HG4_Ill_GATKHC_26235:HG4_Ill_GATKHCSBGrefine_11251:HG4_Ill_250bpfermikitraw_21574:HG4_Ill_150bpfermikitraw_20772:HG3_Ill_GATKHC_26092:HG3_Ill_GATKHCSBGrefine_10815:HG3_Ill_250bpfermikitraw_21263:HG3_Ill_150bpfermikitraw_20688:HG2_Ill_GATKHC_26275:HG2_Ill_GATKHCSBGrefine_10895:HG2_Ill_250bpfermikitraw_21916;NumExactMatchSVs=12;ClusterMaxShiftDist=0.204545;ClusterMaxSizeDiff=0.204545;ClusterMaxEditDist=0.345238;PBcalls=8;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=91;DistBack=16384;DistForward=123;DistMin=123;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=48;REFWIDENED=17:10658944-10658994;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:37:1/1:1:14:1:14:./.:3:11:1:24:1/1:2:25:./.:.:.:.:.:.
chr17	12816961	HG2_PB_SVrefine2PB10Xhap12_12041	T	TGGCTCACGCCTGTAATCCTAACACTTTGGGAGGCCGAGGCAGGTGGATTACCTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12040:HG2_PB_HySA_30260:HG3_PB_pbsv_16263:HG3_PB_assemblyticsfalcon_10488:HG2_PB_pbsv_16618:HG3_Ill_Krunchall_21818:HG2_PB_PB10Xdip_12944:HG3_Ill_250bpfermikitraw_21291:HG2_PB_SVrefine2PB10Xhap12_12041:HG2_PB_SVrefine2Falcon2Bionano_8197:HG2_Ill_250bpfermikitraw_21935:HG3_PB_HySA_25063;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21935:HG2_PB_SVrefine2Falcon2Bionano_8197:HG2_PB_SVrefine2PB10Xhap12_12041:HG3_Ill_250bpfermikitraw_21291:HG3_Ill_Krunchall_21818:HG3_PB_assemblyticsfalcon_10488;NumExactMatchSVs=6;ClusterMaxShiftDist=0.252427;ClusterMaxSizeDiff=0.230769;ClusterMaxEditDist=0.31068;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=13854;DistForward=323;DistMin=323;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=108;REFWIDENED=17:12816962-12817069;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:./.:16:15:16:14:./.:7:14:17:1:0/1:20:6:./.:.:.:.:.:.
chr17	12929452	HG2_Ill_GATKHC_26304	C	CTCTTTCTTTCTTTCTTTTTTTCTTTCTTTCCTTCCTTCCTTCCTTCTTTCTT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_21937:HG3_PB_HySA_25067:HG4_Ill_GATKHC_26261:HG4_Ill_GATKHCSBGrefine_11266:HG4_Ill_250bpfermikitraw_21596:HG2_Ill_GATKHC_26304:HG2_Ill_GATKHCSBGrefine_10907;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21937:HG4_Ill_GATKHC_26261:HG4_Ill_GATKHCSBGrefine_11266:HG4_Ill_250bpfermikitraw_21596:HG2_Ill_GATKHC_26304:HG2_Ill_GATKHCSBGrefine_10907;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0550459;ClusterMaxSizeDiff=0.0550459;ClusterMaxEditDist=0.183486;PBcalls=1;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=-1;DistForward=6;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=17;REFWIDENED=17:12929451-12929470;PctSeqSimilarity=0.9725;PctSizeSimilarity=0.9455;PctRecOverlap=0.9636;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=2181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:9:20:./.:5:9:4:8:./.:5:1:3:12:0/1:12:20:./.:.:.:.:.:.
chr17	14216417	HG2_Ill_Krunchall_22262	G	GTGTGTGTATATATATACATATATATATGTGTGTATATATATATATATACATATATATA	20	PASS	ClusterIDs=HG2_Ill_Krunchall_22262:HG2_PB_pbsv_16627:HG3_Ill_svaba_20711:HG3_Ill_scalpel_15812:HG3_Ill_Krunchall_21839:HG3_Ill_250bpfermikitraw_21310:HG3_Ill_150bpfermikitraw_20734:HG2_Ill_svaba_20532:HG2_Ill_scalpel_15506;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_Krunchall_22262:HG3_Ill_svaba_20711:HG3_Ill_scalpel_15812:HG3_Ill_Krunchall_21839:HG3_Ill_250bpfermikitraw_21310:HG3_Ill_150bpfermikitraw_20734:HG2_Ill_svaba_20532:HG2_Ill_scalpel_15506;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0169492;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.101695;PBcalls=1;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=26505;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=45;REFWIDENED=17:14216418-14216462;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:32:0|1:25:6:4:23:1|0:0:15:20:0:0/1:14:18:./.:.:.:.:.:.
chr17	15998979	HG2_PB_SVrefine2PB10Xhap12_12053	G	GGGGGGGTCAGCCCCCCCCCCCCCCCCGCCAGCCACCCCATCCGGGAGGGAGGTGGGGGGGGGGTCAGCCCCCCTGCCCAGCCAGCCGCCCCGTCCGGGAGGGAGGT	10	PASS	ClusterIDs=HG4_PB_pbsv_16556:HG2_PB_SVrefine2Falcon1plusDovetail_4703:HG3_PB_assemblyticsfalcon_10515:HG2_PB_pbsv_16632:HG2_PB_PB10Xdip_12999:HG2_PB_SVrefine2PBcRplusDovetail_4315:HG2_PB_SVrefine2PB10Xhap12_12053:HG2_PB_SVrefine2Falcon2Bionano_8204:HG4_PB_SVrefine2PBcRDovetail_8305:HG2_PB_HySA_30295:HG3_PB_pbsv_16284;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8204:HG2_PB_SVrefine2PB10Xhap12_12053:HG2_PB_SVrefine2PBcRplusDovetail_4315;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0861244;ClusterMaxSizeDiff=0.0861244;ClusterMaxEditDist=0.246445;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=106;DistBack=36615;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=48;REFWIDENED=17:15998938-15998985;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9815;PctRecOverlap=0.9817;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:2:10:0:5:./.:0:4:0:1:./.:0:5:./.:.:.:.:.:.
chr17	17155718	HG4_PB_pbsv_16558	A	AAAGAAGTAACGCTTTGTTGTGTGGGCTGTCCAGGCGTACAGATAACCGCTATTGGTGTGGGCTGTCCTGGTAGCAGATAACGCTTTGGTGGTGGGCTCGTCCTGGGTACAGATAATCGCTTTGGTTGTGTGGGCTGTCGCTGGGCTACAGATAAACGCTTGGTGTGTGGGCTGTCCTGGGTAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8307:HG4_PB_pbsv_16558:HG4_PB_HySA_24245:HG2_PB_pbsv_16635;NumClusterSVs=4;ExactMatchIDs=HG4_PB_pbsv_16558;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.19726;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=183;DistBack=41;DistForward=4470;DistMin=41;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=72;REFWIDENED=17:17155647-17155718;PctSeqSimilarity=0.9527;PctSizeSimilarity=0.9563;PctRecOverlap=0.7486;SizeDiff=8;StartDistance=42;EndDistance=42;GTMatch=0;TruScore=88;MatchId=2185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:0|1:20:2:1:23:0/0:31:0:16:0:0/0:46:1:./.:.:.:.:.:.
chr17	17363324	HG2_PB_SVrefine2Falcon2Bionano_8206	C	CCACCACCATCACCATCATGAGCATCGCCATCACCACCATCATCACCATCACCACCATCACCATCATGACCATCGCCATCACCACCATCATCACCATTACCACCATCACCATCACCATCATTACCATCACCACCATCACCATCATCACCATCACCACCATCACCATCACCACCATCACCATCATCACCATCACCATCACTGCCATCACCATCACCACCATCACCATCACCATCACTGCCATCACCATCACCATCATCACCATCACCATCACCATCATCACCATCACCATCATCACCATCACCATCATCACCATCACCATCACTGCCATCACCATCACCACCATCACCATCACCACCATCACCATCATCACCATCACCACCAGCACCATCACCACCATCACCATCACTACCCATCACCATCACCATCACCATCATCACCATCACCACCATCACCATCACCACCATCACCATCACCACCATCACCATCACCATCACCATCATCACCATCACCATCATCACCATCATCACCATCACCATCACCACCATCATCACCATCACCATCACCACCATCACCATCACCATCACCATCATCACCATCACCACCATCACCATCACCGCCATCACCACCATCACCATCACCACCATTACCATCACCATCACCATCATCACCATTACCACCATCACCATCACCGCCATCACCATCATCACCATCACCACCATCACCATCACCACCATCACCATCACCACCATCGTCACCATCACCACCATCATCACCATCACCACATCACAATCATCACCATTACCATCACCACCATCACCACCATCACCATCATCACCATCACCATCACTACCATCACCACCATGACCATCACCACCATCATCACCATCACCACCATCACCACCATCACCATCACCACCATCACCATCATCACCATCACCACCACTACCATCACCACCATCACCATCACCACCATCACCATCATCACCATCACCATCACCATCATCACCACCATCATCATCATCACCATCACCACCATCACCATCACTGCCATCGCCATCACCATCACCATCATCACTATCACCATCACCATCACATCACCACCATCACCATCATCACTATCACCATCGCCACATCACCGCCATCACCATCATCACCATCACCACCATCACCATCACCGCCATCACCACCATCACCATCACCACCATTACCATCACCATCACCATCATCACCATTACCACCATCACCATCACCGCCATCACCATCATCACCATCACCACCATCACCATCACCACCATCACCATCACCACCATCGTCACCATCACCACCATCATCACCATCACCACATCACAATCATCACCATTACCATCACCACCATCACCACCATCACCATCATCACCATCACCAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8031:HG2_PB_pbsv_16642:HG2_PB_PB10Xdip_13006:HG3_PB_pbsv_16292:HG4_PB_SVrefine2Falcon1Dovetail_10296:HG4_PB_pbsv_16563:HG2_PB_SVrefine2PBcRplusDovetail_4320:HG2_PB_SVrefine2PB10Xhap12_12059:HG2_PB_SVrefine2Falcon2Bionano_8206:HG2_PB_SVrefine2Falcon1plusDovetail_4709;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4709:HG2_PB_SVrefine2Falcon2Bionano_8206:HG2_PB_SVrefine2PB10Xhap12_12059:HG2_PB_SVrefine2PBcRplusDovetail_4320;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0792891;ClusterMaxSizeDiff=0.0792891;ClusterMaxEditDist=0.261482;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1404;DistBack=17049;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=194;REFWIDENED=17:17363325-17363518;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9979;PctRecOverlap=0.9133;SizeDiff=-3;StartDistance=-121;EndDistance=-121;GTMatch=1;TruScore=96;MatchId=2186.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:78:1/1:0:20:0:16:./.:8:60:3:34:1/1:0:8:1/1:7:308:.:1530:.
chr17	17734394	HG2_PB_SVrefine2PB10Xhap12_12061	A	GCCACCTGCCCACTGCCTCCTTGGACCCACTCCCAGCACCCTCCTCTCCATCCCCCCAACCCTGTCCCTTCAGATGCATTAGGGCTGAACCCCTGGGGGCTCAAAGGCAGCAAATCATACAGCCTCCATCTCCTGCTTTTCAAGGGAGGCCCCCACAGTTCAGAGAGGGCAAGATACTTTCCCTAGGAGCAACAGCAATGCGTGGTCGCACTGGGAGGACTTTCTGCTGCCCTGGGGTTAGACAGGCTGGATGCAGAGGCAGAAAAGGGCATGGGAAGGGGAACATGTCTGATAGGCGAGACCCCTCAGGCTCCACCCCTGAGGGGCTGTCAACACGGGAATGAGGGAGAAGGGGCACCATACCAGAGCAGGCTCTGCCTGAGGTGGGGGTTCTGGATAAATGGGCAATATCACACGAGGGGCATGTTTGGCAATCCTTGCATGTCTTGAATGCCATGCTGAGGCAAGGGAACTTCTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTTAGCCAGGATGGTCTCCATCTCCTGACCTCATGATCCGCCCACCTCGGCCTCCCAAAAGTGCTGGGATTACAGGCATGAGCCACCGCG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1924:HG3_PB_pbsv_16294:HG4_PB_SVrefine2Falcon1Dovetail_10298:HG4_PB_pbsv_16565:HG4_PB_SVrefine2PBcRDovetail_8310:HG2_PB_assemblyticsPBcR_10145:HG2_PB_SVrefine2PBcRplusDovetail_4322:HG2_PB_SVrefine2PB10Xhap12_12061:HG2_PB_SVrefine2Falcon2Bionano_8208:HG2_Ill_SVrefine2DISCOVARplusDovetail_5072:HG2_10X_SVrefine210Xhap12_11519:HG2_PB_assemblyticsfalcon_10540:HG2_PB_SVrefine2Falcon1plusDovetail_4711:HG2_Ill_breakscan11_4713:HG4_Ill_GATKHCSBGrefine_11284:HG3_Ill_GATKHCSBGrefine_10857:HG2_Ill_GATKHCSBGrefine_10923:HG4_PB_HySA_24251:HG2_PB_PB10Xdip_13008:HG4_Ill_MetaSV_1996:HG3_Ill_MetaSV_2066;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11519:HG2_Ill_SVrefine2DISCOVARplusDovetail_5072:HG2_PB_SVrefine2Falcon2Bionano_8208:HG2_PB_SVrefine2PB10Xhap12_12061:HG2_PB_SVrefine2PBcRplusDovetail_4322:HG2_PB_assemblyticsPBcR_10145;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0386598;ClusterMaxSizeDiff=0.0360825;ClusterMaxEditDist=0.20526;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=766;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:17734395-17734393;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9987;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:80:1/1:2:8:0:28:./.:0:8:0:0:1/1:0:22:1/1:5:100:.:.:.
chr17	17910464	HG2_PB_SVrefine2PB10Xhap12_12062	A	AGGCGGGGCGGGCGGAGCATGTCGGGGAAGGGCTGGATGGAGTTGGACTGGGTGGGGAAGGGGCGGAGATGGGGCGGGGCGGGGGGGGGGGAGCTGGGAGGGAGGGGAGG	20	PASS	ClusterIDs=HG2_PB_HySA_30314:HG2_PB_PB10Xdip_13009:HG4_PB_HySA_24252:HG4_PB_pbsv_16566:HG2_PB_pbsv_16645:HG2_10X_SVrefine210Xhap12_11521:HG4_PB_SVrefine2PBcRDovetail_8311:HG2_PB_assemblyticsPBcR_10146:HG2_PB_assemblyticsfalcon_10541:HG2_Ill_breakscan11_4714:HG3_PB_HySA_25127:HG2_PB_SVrefine2Falcon2Bionano_8209:HG3_PB_SVrefine2PBcRDovetail_8033:HG2_PB_SVrefine2PBcRplusDovetail_4323:HG2_PB_SVrefine2PB10Xhap12_12062:HG4_PB_SVrefine2Falcon1Dovetail_10299:HG2_PB_SVrefine2Falcon1plusDovetail_4712:HG3_PB_pbsv_16295;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12062:HG2_PB_SVrefine2PBcRplusDovetail_4323:HG3_PB_SVrefine2PBcRDovetail_8033;NumExactMatchSVs=3;ClusterMaxShiftDist=0.273585;ClusterMaxSizeDiff=0.273585;ClusterMaxEditDist=0.313726;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=109;DistBack=8587;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=17:17920222-17910476;PctSeqSimilarity=0.991;PctSizeSimilarity=0.982;PctRecOverlap=0.982;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2188.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:./.:0:7:0:4:1/1:0:6:0:5:1/1:0:19:./.:.:.:.:.:.
chr17	18201525	HG2_PB_SVrefine2PB10Xhap12_12064	G	GAGCCCCTCCGCCCAGCAGCCGCGCCGTCTGAGAAGTGAGAAGCCCCTCCGCCCAGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCCAGCAGCCACCTCGTCCGGCAGGGAGGTGGGAGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCTCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGAAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCAGCCGGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCTTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTAGGGGGGTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12064:HG2_PB_pbsv_16647:HG2_PB_PB10Xdip_13010:HG4_PB_pbsv_16568:HG2_PB_SVrefine2Falcon1plusDovetail_4714:HG3_PB_pbsv_16297:HG4_PB_SVrefine2Falcon1Dovetail_10301:HG2_PB_SVrefine2Falcon2Bionano_8211:HG2_PB_SVrefine2PBcRplusDovetail_4325;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12064:HG2_PB_SVrefine2PBcRplusDovetail_4325;NumExactMatchSVs=2;ClusterMaxShiftDist=0.114125;ClusterMaxSizeDiff=0.106642;ClusterMaxEditDist=0.231993;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=529;DistBack=768;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=339;REFWIDENED=17:18201526-18201864;PctSeqSimilarity=0.9773;PctSizeSimilarity=0.9962;PctRecOverlap=0.6219;SizeDiff=2;StartDistance=-199;EndDistance=-199;GTMatch=0;TruScore=86;MatchId=2189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:48:1/1:3:22:1:15:./.:0:0:0:0:./.:0:7:./.:3:50:.:.:.
chr17	18268083	HG2_PB_PB10Xdip_13011	A	TTTTTTTTATTTTTGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGTCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCACAGCGCCCGGCCGCAATATTTTTTTTAAAGTGATAAAAACCAAGGGGCTGCAACTGGGGAAAGAGCCCAGGTACCTGATCTTTGGTAAATTGCCTTCTCTGAGTCTTATCATCCCCACTTAGAGGATAGACTAATTTTTCAGTCCTCAGAACTTTGTTCCCCTCTCATCGATTTCCAAAATGTTGTAACAAATGTGGCTAGTGTGACAGTTAATGCATGGATTCAAAAGAGATTCAGAAAAGTCCAGGGAGAGATAGTAAGAGTGTAGGGATCTATTAGAAGTTGGAGAGGAAGCAGTTCTTTCTACAAGAGTCATACACACTACAGTACCTATACTCTGAATGATTTTGTCAAATAGCTTTTTGGCCTAGTGACATGCCACCCGCCCCCCCGTCCCCGCCATGGATTTTTGGAATTTAGAACATCAAGCAGGAAGTAGATTCTAAGGACAAATACAAATTAAAGATACTAGGTTTTAGTCTCCCAGTTGAAAATAAGAGATTTTCCTCCCCTCCTTTTTCTTTGAGCATTTACTTTTGAAAACTTGCCATTGTAACTGTTTTCTTCTCTATTTGAAATCTGCGTAAATCTTTTCAACACTAGATAGGCCTTTTGTCAGCTTTATGACCTAGGAATATCTTCCTCAAGGAACTGAAATGTAAACAGCAAGGTAGACAGCACCCATATCTCCCAGTTTCTGTGGGAGGGTAGAAGCCTAATTTTGGGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCACCACTTTGGGAGGCTGAGGCGGGCGGATCACCTGAGGTCAGGAGTTGGTGACCAGCCTCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCAGGTGTGGTGGTGCATGCCTGTAATTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCCTGAACCTGGGAGGCGGAGGTTGCGGTGAGCCAAGATGGCGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAGAAGCCTAATTTTGGTGGGCTTCCTGCCCCAAATTGCAAAACCACTTCCTGTCATAAAGATATGAAAAGTTTGCTTTTCCTCTAGATAAAGCCAAATAGGATGAACTATATGGGAGAAAGTGTGCTGTCAAGTCCTCTTATTTGAGGACTAATTATGGTTTATTTTGGAAAATATGTATGTACTGAGTTCTATCTGCTTGGCTATATAAGGGGGTGAGATTTCTTTCTGTCTGCAATTTCTTAGCAGATTGCCTGTGATGTGTTTCACTTTCTGGCTTAATGTTTTATACAATACTAAAGTGTTTTCTTTTTCACTAGCTTTGTGAAGAACACTTCTGGATTGGGAGAAAATTTTGTTTTAAATTATATTTTTCGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGACCGAGGTGGGTGGATCACCTGAGGTCGGGAGTTTGAAACCAGCCTGACCAACACAGAGAAACCCCGTCTCTGCTAAAAATACAAAATTAGCCGGGCATTGTGGCGTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGAGAGGCAGAGGTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGCCTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGATCAAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCAGCCTGGCCAATATGGTAAAACCCCATCTCTACTAAAAATACAAAAAAATTAGCTGGGCATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGACAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCGCGCCACTAGACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAAATACCCAGGCCTGGTGGTGGGTGGCTGCAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAATCCAGGAGGCGGAAGTTGCAGTGAGCTGAGATGGAGCCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAAAAAAAAACAAAAAAAAACAGTATATTTTTCTGGCCAGGTGCAGTGGCTGATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCTGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAACCTGATCTCTACTAAAAATACAAAATTAGGTCGGGCTCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGTGAGGTCAGGTTAGTGACCAGCCTGGCTAACACGGCGGAATCCTCTCCACTAAAAATACAAAAATTAGCCAAGTGTGGCGGCTCAAGCCTGTAATCCCAGATACATGGGAGGCTGAGGCGGGAGAATCGCTTGAACCCGGGAGGCGGAGGTCGCCATGGGCCGAGATCACGCCATTGCACTCCAGCCTGGGGAGCAAGAGTGAAACTCCATCTCAAAAAAAAAAAATACTGTCAACACCAAATGCTGGCAGATTTGTAACAAGACTGGATATAACATAACATACATTGCTGGTGGAGACGTAAAACGTAGAGCCACTCTGGAAAATAGTTTGTCAGTGACAACAAACTAAGCACTTTCCATAGGACCCAGCAATTGCACTGCTGGGCACTTATCCCAGAGAATAGAAAAGTTATGTCCACACAATCTGTACATGAATGTTCACAATAATGTTATTTGTAATAACCAAAAACTAGAAATATTAGAAATGTCCTTCAGCAAATAAATGGTTAAACTATGGTATATCCAGACATGGAATACTAGTTAACAATAAAAGGAAATGAGCTATTGATACATACAACTTGGATGGATCTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTGTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGTCTGCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGAGCATGTCGCCATGCCTGGCTAATCTTTTGTATTTTGGTGGAGACGGGGTTTCACCAGGTTGCCCAGGCTGGTCGCGAACTCCTGAGCTCAGGCAATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACCACGCCTGGCTAGGAGGATCTTTTTATATGTGTGTGTGTGTGTGTGTGTGTGATTTCTTGGTATATCCTAATTGGATGGATCTTAAGGGAATTATGCTGCATGAAAAAAAAAGGCAAGTCAGGCTAGGCGTGGTGGCTCACACCTGTAATCCCAGCATTTTGGGAGGCTGAGGCGGACGGATCACCTGAGGCCAGAAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCACCTCTACTAAAAATATAAAAATTAGCCAGGTGTGGTGGCCGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGACAGGAGAATCGCTGGAACCCGGGAGGTGGACGTTGCAGTGAGCTAAGATCACACCACTGCACTCCAGTCTGGACAACAGAGTAAGACTCCATCTCGAATAAAAAAAAAAAAAAGGCAATCTCAAAAGGTTACAGACTATGATTTGATTCCATTTATATAACATTCTTGAAATGACATAATTACAGAAATGGAGAACAAATTACTCATTGTCAGGAATTAGGGATGGTGTGGAGCAGGGTTATGTCTATAAAGGGGTGAGGGCCTGGCGTGGTGACGCATACCTGTAATCCCAGTGCTTTGGGAGGCTGAGATTCGAGGATCACTTGAGGCCAGGACTTTGAGACCAGCCTGGGCAACATGGCAAGACCTTGTCTCTACAAAAAATTGAAAAACTTGGCCGGGCACAGTGGCTCATGACTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCGTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAAATACAAAAAATTAGCCGGGTGTGGTGGCAGGCCCCTGTGGTCCCAGCTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCGTCTCAAAAAAAAAATTGAAAAAATTATCCAGGCCTGGTGGTGCATGCATGTCTGTAGTCCCAGCTATTCTGGAGGCTTAGGTGGGAGGATCACATTAGTCCAGGAGTTCAAGGCTGCAGTGAACTATCATTGTGCTGCTGCACTCCAGCCTGGGCAGCAGAGTGAGGCTCTGTCTCTAAAACTTACTAATAAAATAAATAAAAGGCGAAAGAGATCTTTGTGGAACAGTTTTGTATCTTGATTGCAATGGTGAGTACATGAATCAACATGTGATAAAATGGCATAAAACCATATACACATATTTCATTAATGTAAATTTCATGGTTTGATATTGTACTATAGCTATGGAAAACGTAGCCATGGGAGGAACTGTGTGAAGAGCACACAGGACTTCTCTGTGCTGTGTGCAGTTTCCTGTGAATATAAAATTATTTTGAAATTAAAGGCCAGGCGTGGTGGCTTTGGCTGGGTGTGGTGGCTCATGCTTGTAATCCCAACAGTTTGGGAGGCCAAGGCAGGCAGATCACTTGAGGTCAGGAATTCAAGACCAGCCTGACCAACATGGCAAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGTGTGGTGGCATATGCCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCATGAGAATCACTTGAACCCAGGAGGCAGAGATTACAGTGAGCCCAGATCATGCCACTGCACTCCAGCCTGGGTGACTAAGTGAGACTCTGTCAAAAAAAAAATGTATATATATATATATTCTCTCACAGTTCTGGAGGCTCAAAGTCAGGAATCAAACTGTTGGCAAGGTCATTTGAAGCCTGGAAGGGGGGATCGTTTCTTGACTCCTCCAGCATCTGGAGGCTACTGGCCATCCTGGTGTTACTAAAACACCAGGGGTTCCGTCTAGGGCCTGCCACTCACCTCACAGAAAGCCAATCACTGAGACAATGATTATTGCCAAGGAAGAAGGCTTTAATAAGGTGCTGCAGCTGAGGGGATGGGAGGTATTTATCCCAGGAATGAAGGGGGTGGTTCAACATAAGAAAATCAATTAATGTAATATACCACATTAGTAGAACAAAGGGAAAAAAACAGTCATTCCAGCTGACACAGAAAAAGCATCTAAGAAATTCTAACATTTCACGATTAAAACATACATAAAACTATGAAACGAGAGGAATTGCCTCAACATTATAAGAGATATTTGTGAAAAACCCACAGTTATCATCATACTTAATGGCAAAAGACTAAAAGCTTTCCCCCTAAGATCAGGAAGAAGACACAGAGGTTCACTTTTACCACTGCTAGTCAACACTTTACTAGAAGTTGTAGCCAAAGCCTTTAGGTAAGAAAAAGCAATAAGAGGCACCAAATTGGGAAAGAAGAAATAAAACTATCTCTCTAAATATAGAAAATCCCAAGGAATACTCACACAAAAATTACTAGAGCTAATAAGCAAATTCAGCAAAGTTTCAGAACACAAGATCAACTCACAAAAACCAGTTGTTGTTTTTTGTTGTTGACATTTTTTTTTTTTTTAGGAGTTTTGGTTTTTTTGCCCAGGCTAGAGTGCAATGGCTGGATCTTGGCTCACTGCAACCTCGGCCTCCCGGGTTCAAGTGATTCTCCAGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCCCACCACCACGTTTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAATTCCTGAGCTCAGGTGTTCCGCCCGCCTCGGCCTCCCAAAGTGCTGATGATAGACATGAGTCACCGTGCCTGGTCCAGTTGTGTTTTTATACACTAGCAAGGAACAATTCAAAAATATAATTAAGAAATCCGCGGCTGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGAGGGCGGATCATGAGATCAGGAGATCGAGACCAACCTGGCTAACACAGTGAAACCCTGTCTCTACTAAAAAATACAAAAAAAAAAAATAGCTGGGTGTGGTGTTGAGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCTCATCACTGCACTCCAGCCTGGGTGACTGAGCGAGACTCCATCTCAAAAAAAAAAGAAAAAAGAAAACCGCTGGGCGTGGTGGCTCACGCCTGTAGTCCCACCACTTTGAGAGGCTTAGGTGGGTGGATCCCTTGAGCCCTGGAGTTCAACACCAGCCTGGGCAATGTGGTGAAGCCCCTTCCCTACAAAAAAAAACATAAAAAATTAGCCTGGTGTGATGGCATGTGCCTGTGATCCCAGCTGTTCAGGAAGCTGACGTGGGAGGATCACCTGAGCCCTGGAGGTCAGGGCTGCAGTGAGCCGTCATGCATCATTGCACTCCAGCCTAAAAAAGTTGTGAAATTCTGCAATATGTTACAACATGAATGAACCTTGAAAAGAAATATAAGTGAAGTAAGCCAGATACAAAAAGACAATATTGCATGTTTCCACTTTTAGAGGTACCTACAAGAATCAAATTCATAGAGACAGAAAGTAGAATAGTGGTTAAAAGGGTCTGGGCAGAGGGAGGGAAGGGAAGTTTGTTTTATGGGTTAGAGTTTCAGTTTGCGATGTCGAAAAAGTTCTGGAGATAAATAATGGTGATGGTTACGTGCCAATGGCTACATGAATGTACTTAATGCCACTGAATTGTATATGTGAAAAATGGTTAAGATGGTATATTTTATGTCTATTGTATACTATCTCCCCTAAAAAAATTGTTTTTAAGAGTCAAGATCTCACAGTCTCCCACGCTGGGGTGCAGTGGGGCGATCAAAGCTCACTGCAGCTTCGGACTCAGCCAGCTTCCCTGGCTCAAGGGATCATCCTGTTCACCCTCCCCAGTAGCTGGGACTACAGGCGGTGCCCCCACGCCCAGCTCATTTTTTATTTTTTATTTTTCCCCCCTTGGTAGAGACGGGATTCTGCTATATTGCCTAGGCTAGTCTTGAACTCATAGAACAAAGTATCCTCTCGCCTGGACCGCGGCGTGGGCTCTCAAAACACCAGGATCACCGGATTACAGGACACCAGGAGCAAACGCTTCCCGCTTTAAAAATTCAGGTTGTGATTGGCTGTCATTCCGTATTATGCTAATTTAGCATGCTTGCTTTTAAACTTTTTAAATTAAAACAATTTTTAAAATTACGTTTCCACTTAAAACGTTAAAATGTGTTCTTAAGTGATAGTATTCGAAAAGATGTTATTGCTAATATATCTTCCTATTTATTTCCTAAGGGAATCAGAAGCAGCGAAACTATCTCGCCATCAGTTCAAAGTGCACGGCGGATGTGGACCCAGCACAGGCTAGGATTACAAAATTAAGACTATACTTCCGGATATCACTTCTATAGTTTGTTACTAAGAAGTTTTTCTGAACGTGTAGAGCACGGGAAAGCACAAGGGAGAAATGTAGTTTTTTTTTCTGAGCGTGAAAATGGTTTTTTGTTGTTGCTTTCATTGCAAGTACGATTTGCCATTGACTATCGTTCTTACTGTTCTCTTTGGAGGGTAAGAGGAAGAGAACGCGGTCTGAGTGGGTTTCTTGCTTTTAATGGTTTAACAGAAGAAGGTGGTTTGGTTACATTGGTTTTAATTATTCGTATTGGTAATGAGTTCTTTAATCATACTTAAGTGCTATACTGTTTTAGTGTGGTATTTTGTCTTGATCCTGTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4715:HG2_PB_HySA_30319:HG2_PB_HySA_30318:HG2_PB_PB10Xdip_13011:HG2_PB_assemblyticsPBcR_10151:HG2_PB_assemblyticsfalcon_10545:HG2_PB_SVrefine2PBcRplusDovetail_4326:HG2_10X_SVrefine210Xhap12_11522:HG2_Ill_SVrefine2DISCOVARplusDovetail_5076:HG2_PB_SVrefine2PB10Xhap12_12065:HG2_PB_SVrefine2Falcon2Bionano_8212;NumClusterSVs=11;ExactMatchIDs=HG2_PB_PB10Xdip_13011;NumExactMatchSVs=1;ClusterMaxShiftDist=0.168286;ClusterMaxSizeDiff=0.168286;ClusterMaxEditDist=0.177154;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=8108;DistBack=9701;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=17:18268084-18268099;PctSeqSimilarity=0.9165;PctSizeSimilarity=0.8459;PctRecOverlap=0.846;SizeDiff=-1477;StartDistance=-10;EndDistance=-10;GTMatch=1;TruScore=86;MatchId=2190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:57:./.:8:16:14:4:./.:4:0:0:0:0/1:22:32:1/1:1:826:.:9678:.
chr17	18916910	HG3_Ill_SVrefine2DISCOVARDovetail_11846	C	CTACTGTGGATCTAGTGTGATGCTGGGTGACATCCAGGTGGGCTGTTCTGCTCCTAGGAGAGGAGAGCAGAAGCACTCACGATAGAAAACACTCGAACACCCACTGCGTGCCACCACCATCCCCAGGGCTTCCCAGGTGATGCACTGGCCTCCTCTTCTCAGGAACCCCTAGTGCTGTTAGTATCATCCCCATTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTATTGCCCAGGCTGGAGTGCAATGGTGTGATCTCAGCTCATTGCAACCTCCACCTCCTGGGTTTAAGCTATTCTCCTGTCTCAGCCTCCCAAATAGCTGGAATTAAAAGCGTGTGCCACCACACCTGGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACTATGTTGACCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCTGGCCTATATCATCCCCATTTTAAAGACAGGGAAACTGAGACCAAGAGAGGTTAAGTGACCTGGCCCAGGTTACATGGCAAGTAAGCTGCAAAGCTGGGCTTCTGACCGGATGCATCTGCCTGCACACCCTGATCTCCTATCTCATGCTGTACCATCTCTTGAGAAAGGCCACCCACTCTCTCCTCTTGCATGCCTACTAGCTGCCAGGCCCTTTACTAACAGTTTCTCATTAAATGCTATGAGATAGGGTTATTGGCTCCATTTTACAGATGGGGAAACTGAGGCACAGAGAGGGGAAAGTGACTTGTCTGAAGTTGTATAGTGACTGAGACACAAACCCAAGACACAAACTGCTTACTCTGCTGGGATCAGGAGCTCAGGACCCCCCATTACATCTGCAGGCATGAGTGCCTATCCTCTGCAAGCCCCCCGCCCACCGCCCTGAGACACTGCAAGCCAATGGGTAGAACTAGTGGGCAGGTTTTGGCTTTTTCCATGTTTCTCATGGTAGCAGCATCCCTGCCATTTTAATGTGGGGTGATGAGTTCCCCATCACAGGAGGTAGACAAGTTCTCCATCACAGGAGGTATGCAAGGAGGAGGAAGCAACATAGCAAGGGGTTTGGGAGGTTCAACCCTAAGCAAAAAGCAGAAACAGTTTCCTGAGCCCTTTGCAGCCCGAGCTTTCCCTCTACAGATTCTCAGGTGCTGGAGATTTCCCTGGTCCCCCTCTTTCTAATCCCCTCTTCCTGGAAGCTTTCGATCCCTCAGGTGAGCCCCACCCTGCTCTCTCCTCCTCTCCTTCCCTCCCTCCCTCCCTCCTGCAGAGCTTAGGCCTAAGGGAACTGAGTACACAGACCTAGGATCAGATCTTGGCTG	20	PASS	ClusterIDs=HG2_Ill_Spiral_1088:HG3_PB_pbsv_16302:HG2_PB_assemblyticsPBcR_10155:HG4_PB_pbsv_16573:HG4_PB_assemblyticsfalcon_10344:HG2_PB_assemblyticsfalcon_10549:HG2_PB_PB10Xdip_13014:HG4_PB_HySA_24271:HG3_PB_SVrefine2PBcRDovetail_8039:HG2_Ill_MetaSV_1927:HG4_Ill_SVrefine2DISCOVARDovetail_11627:HG4_PB_SVrefine2PBcRDovetail_8318:HG2_PB_SVrefine2PBcRplusDovetail_4331:HG2_PB_SVrefine2PB10Xhap12_12072:HG4_Ill_GATKHCSBGrefine_11290:HG3_Ill_SVrefine2DISCOVARDovetail_11846:HG2_Ill_SVrefine2DISCOVARplusDovetail_5084:HG2_10X_SVrefine210Xhap12_11525:HG4_PB_SVrefine2Falcon1Dovetail_10303:HG2_PB_SVrefine2Falcon1plusDovetail_4720:HG3_PB_SVrefine2Falcon1Dovetail_10288:HG4_Ill_Spiral_1297:HG3_Ill_Spiral_17014;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11525:HG2_Ill_SVrefine2DISCOVARplusDovetail_5084:HG3_Ill_SVrefine2DISCOVARDovetail_11846:HG4_Ill_GATKHCSBGrefine_11290;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0609975;ClusterMaxSizeDiff=0.0595623;ClusterMaxEditDist=0.222615;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=1365;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=17:18916911-18916911;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9985;PctRecOverlap=0.9985;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:90:1/1:0:29:0:20:1/1:0:7:0:7:1/1:0:37:./.:12:168:.:1600:.
chr17	19519881	HG2_PB_assemblyticsfalcon_10553	G	GTATGTATATATAATATATAATATGTATATATATGTATGTATATATAATATATAATATGTATATAT	20	PASS	ClusterIDs=HG3_Ill_Krunchall_21866:HG2_PB_assemblyticsfalcon_10553:HG3_PB_pbsv_16305:HG2_Ill_250bpfermikitraw_21979:HG2_PB_pbsv_16654;NumClusterSVs=5;ExactMatchIDs=HG2_PB_assemblyticsfalcon_10553;NumExactMatchSVs=1;ClusterMaxShiftDist=0.100719;ClusterMaxSizeDiff=0.100719;ClusterMaxEditDist=0.246575;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=7;DistForward=38;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=201;REFWIDENED=17:19519827-19520027;PctSeqSimilarity=0.9767;PctSizeSimilarity=0.9286;PctRecOverlap=0.4085;SizeDiff=-5;StartDistance=39;EndDistance=39;GTMatch=0;TruScore=77;MatchId=2192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:35:./.:24:9:2:25:./.:13:0:19:1:0/1:36:20:./.:.:.:.:.:.
chr17	19869960	HG4_Ill_250bpfermikitraw_21636	T	TATAAGCACAGAATTTTTTAGCCCAGTAGAGATTTAGAAATTAGCTAGGCCAATCCCCCCATTCAACAAATGAAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4335:HG2_PB_pbsv_16657:HG2_PB_HySA_30348:HG4_PB_HySA_24276:HG4_Ill_svaba_20537:HG4_Ill_SVrefine2DISCOVARDovetail_11635:HG4_Ill_Krunchall_22632:HG4_Ill_GATKHC_26325:HG4_Ill_GATKHCSBGrefine_11294:HG4_Ill_250bpfermikitraw_21636:HG2_Ill_svaba_20560:HG2_Ill_SVrefine2DISCOVARplusDovetail_5093:HG2_Ill_Krunchall_22295:HG2_Ill_GATKHC_26361:HG2_Ill_GATKHCSBGrefine_10933:HG2_Ill_250bpfermikitraw_21983:HG2_10X_SVrefine210Xhap12_11531;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11531:HG2_Ill_250bpfermikitraw_21983:HG2_Ill_GATKHCSBGrefine_10933:HG2_Ill_GATKHC_26361:HG2_Ill_Krunchall_22295:HG2_Ill_SVrefine2DISCOVARplusDovetail_5093:HG2_Ill_svaba_20560:HG4_Ill_250bpfermikitraw_21636:HG4_Ill_GATKHCSBGrefine_11294:HG4_Ill_GATKHC_26325:HG4_Ill_Krunchall_22632:HG4_Ill_SVrefine2DISCOVARDovetail_11635:HG4_Ill_svaba_20537;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0544218;ClusterMaxSizeDiff=0.0533333;ClusterMaxEditDist=0.264901;PBcalls=4;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=75;DistBack=14749;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=77;REFWIDENED=17:19869961-19870037;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:35:./.:17:21:12:7:./.:2:22:9:0:0/1:22:33:./.:.:.:.:.:.
chr17	19941628	HG2_PB_SVrefine2PBcRplusDovetail_4337	A	AACTTTTTCTCTTTTCTTTTTTTTGTTTTTTTTTTTGTTTTTTTTTTTTTTTTAAAGTTGAAAATTTTTTTTATTTATTTATTTATTTTTTTAATTGATCATTCTTGGGTGTTTCTCGCAGAGGGAGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCAGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCACCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCCTGGCCGGGCAGAGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGCTGACCCCCACCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCTCCCGGACGGGACGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGATGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGACGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGCTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACAGGGTTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTCCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGAGGCTCCTCGTATCCCAGACGATGGGCGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCGGGGCAGAGGCTGCAATCTGGGCACTTTGGGGGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCAACATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTCAGGAGCTGGAGACCAGCCCGGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGTGCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTACAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCGCGGAGGGAGAGGGAGAGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGG	10	PASS	ClusterIDs=HG2_PB_HySA_30350:HG2_PB_pbsv_16659:HG2_PB_HySA_30351:HG2_PB_PB10Xdip_13030:HG2_PB_SVrefine2PB10Xhap12_12082:HG2_PB_SVrefine2PBcRplusDovetail_4337:HG2_PB_SVrefine2Falcon1plusDovetail_4728;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_4337;NumExactMatchSVs=1;ClusterMaxShiftDist=0.037518;ClusterMaxSizeDiff=0.0366935;ClusterMaxEditDist=0.101422;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2423;DistBack=5904;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=17:19941629-19941644;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9975;PctRecOverlap=0.9975;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:40:1|0:3:27:46:1:1|0:0:9:30:0:0/1:16:6:0/1:96:187:.:6162:.
chr17	19995606	HG3_PB_SVrefine2Falcon1Dovetail_10295	G	GGAAATCATGAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGTAACAATTTTTATTTAGTGAATTGGCAGTAGGTAGTAAGCGAATAGTCCTTAGGTGACGGTTCTCAAATCTCTGTGCCCTGTCTATAGTGATCAAAGGCTCAGTTCTGGGGACCAGACCTTTCTATAGGCTGATTGATGCTTGCGAGCCTAGGAGTGTCAAAAGAACAAATGCCCATGTTTTAGTAGGGCCCCAGGTCCTGAGATGAATCCCTTCCAGAAAAGCCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTTTATTTTATTTTATTTTTATTTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACCAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAGTGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCATCCTCCCGGACGGGGCAGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGTCCCTCACCTCCCGGACGGGGCGGCCGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGACCCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGTCGGCGTGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGCGGCTGGCCAGGCGGGGGCTGATCCCCCCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGTGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGATCCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCTGGGCAGAGGGGTCCTCACTTCCCAGTAGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCCGGCCGGGCGGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCACCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCTCCCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCAACTCCCTCCTGGACGGGGCGACTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGCTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACAGGGTTGCGGCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGAAGGCGGCGGGGAAGAGGCGCTCCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGAGGCTCCTCATATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCTGGGCAGAGGCTGCAATCTCGGCACTTTGGGGGGCCAAGGCAGGCGGGCTGGGAGGTGGAGGCTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCACTGAGCACTGAGTGAACGAGACTCCGTCCGCAATCCCGGCACCCCAGGAGGCCGAGGCTGGCGGATCACTCGCGGCTAGGAGCTGGAGACCAGCCGGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAAACGAAAACCAGTGAGGCGTAGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGCTGCAGTGAGCCGAGATGGCAGCAGCACCGTCCAGCCTTGGCTCGGCATCAGAGGGAGACCGGTGGAAGGAGACTGTGGAAGGAGACTGTGGAGGAGAGGGAGAGGGAGAGGGAGGAGGGAGAGGGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGGGGAGAGGGAGAGGGGAGAGGAGAGGGAGAGGGAGAGGGAGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGAGAGGGAGAGGGCCAGAAAAGCCCTTTCTTAACAATC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4715:HG3_PB_pbsv_16313:HG2_PB_HySA_30352:HG2_PB_SVrefine2PB10Xhap12_12083:HG3_PB_SVrefine2Falcon1Dovetail_10295:HG2_PB_SVrefine2PBcRplusDovetail_4338:HG4_PB_SVrefine2Falcon1Dovetail_10312:HG2_PB_PB10Xdip_13031;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10295;NumExactMatchSVs=1;ClusterMaxShiftDist=0.134576;ClusterMaxSizeDiff=0.134576;ClusterMaxEditDist=0.235071;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=3527;DistBack=41204;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=17:19995607-19995620;PctSeqSimilarity=0.989;PctSizeSimilarity=0.9983;PctRecOverlap=0.9983;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:86:1/1:1:11:2:29:1/1:0:5:0:17:1/1:0:21:1/1:3:467:.:6162:.
chr17	25595055	HG3_PB_assemblyticsfalcon_10569	AACCAATGGACTCT	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGTCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCCGCCGGCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10304:HG4_PB_pbsv_16601:HG3_PB_assemblyticsfalcon_10569:HG2_PB_HySA_30396:HG2_PB_pbsv_16677:HG4_PB_SVrefine2Falcon1Dovetail_10318;NumClusterSVs=6;ExactMatchIDs=HG3_PB_assemblyticsfalcon_10569;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0939794;ClusterMaxSizeDiff=0.0939794;ClusterMaxEditDist=0.26513;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=317;DistBack=-2;DistForward=8116;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=17:25595069-25585328;PctSeqSimilarity=0.9776;PctSizeSimilarity=0.9379;PctRecOverlap=0.9676;SizeDiff=-21;StartDistance=0;EndDistance=13;GTMatch=0;TruScore=96;MatchId=2196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:27:0|1:27:0:2:19:./.:3:1:29:0:./.:39:4:0/1:11:24:.:.:.
chr17	26931062	HG2_PB_SVrefine2Falcon2Bionano_8224	C	CCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCTCCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8224:HG2_PB_assemblyticsfalcon_10583:HG4_PB_SVrefine2Falcon1Dovetail_10322:HG2_PB_SVrefine2Falcon1plusDovetail_4741:HG3_PB_pbsv_16335:HG2_PB_HySA_30410:HG4_PB_pbsv_16608:HG2_PB_PB10Xdip_13096:HG4_Ill_GATKHCSBGrefine_11305:HG3_Ill_GATKHCSBGrefine_10876:HG2_Ill_GATKHCSBGrefine_10943:HG2_Ill_250bpfermikitraw_22008:HG2_PB_pbsv_16685:HG3_PB_SVrefine2PBcRDovetail_8055:HG3_Ill_SVrefine2DISCOVARDovetail_11864:HG2_PB_SVrefine2PBcRplusDovetail_4359:HG2_PB_SVrefine2PB10Xhap12_12105;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8224:HG3_PB_SVrefine2PBcRDovetail_8055:HG3_Ill_SVrefine2DISCOVARDovetail_11864:HG2_PB_SVrefine2PBcRplusDovetail_4359:HG2_PB_SVrefine2PB10Xhap12_12105;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0612245;ClusterMaxSizeDiff=0.0612245;ClusterMaxEditDist=0.278351;PBcalls=12;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=99;DistBack=3293;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=179;REFWIDENED=17:26931063-26931241;PctSeqSimilarity=0.9889;PctSizeSimilarity=0.9899;PctRecOverlap=0.6364;SizeDiff=1;StartDistance=-36;EndDistance=-36;GTMatch=0;TruScore=87;MatchId=2197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:58:1/1:1:25:1:20:./.:0:0:0:0:0/1:6:8:./.:.:.:.:.:.
chr17	28398309	HG2_PB_SVrefine2Falcon1plusDovetail_4744	AGCC	TATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAACAACAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTACACCATTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAACCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGTCGGGGGAGAGGGGGAGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_30426:HG2_PB_SVrefine2PB10Xhap12_12108:HG2_PB_assemblyticsfalcon_10597:HG2_PB_SVrefine2Falcon1plusDovetail_4744:HG2_PB_SVrefine2PBcRplusDovetail_4361:HG2_PB_SVrefine2Falcon2Bionano_8226:HG4_PB_SVrefine2Falcon1Dovetail_10326:HG2_PB_pbsv_16691:HG4_PB_pbsv_16613:HG4_Ill_MetaSV_2010:HG4_PB_HySA_24334:HG2_PB_PB10Xdip_13104;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4744:HG2_PB_assemblyticsfalcon_10597;NumExactMatchSVs=2;ClusterMaxShiftDist=0.236242;ClusterMaxSizeDiff=0.234452;ClusterMaxEditDist=0.313199;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1210;DistBack=8;DistForward=67614;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:28398313-28398308;PctSeqSimilarity=0.9947;PctSizeSimilarity=0.9959;PctRecOverlap=0.9975;SizeDiff=-5;StartDistance=1;EndDistance=4;GTMatch=0;TruScore=99;MatchId=2198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:44:0|1:49:1:0:31:1|0:0:14:48:0:0/1:35:9:0/1:47:181:.:1216:.
chr17	29119903	HG2_PB_SVrefine2PBcRplusDovetail_4363	G	GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCATTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAATCTAATTAATAAATGAGTCTACATCTTCTAAAAAAGAATGCAGGGGAGAGATCAATTTCAAATCATAAGACTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAAGCTCTGCCTCCCAAGTTCAGCCATTCTCCTGCTTGAGCCTCCCAAGTAGTTGGGCCTACAGGTGCCCCATGCCTGGCTAATTTTTGGTATTTGTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGCACTCGTGATCCGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGCCCGGCCCTCAAATCATCAGACTTTTAAAAATGTCTCTCTCCAGGTATTTCTTGAGAGTTTGGAAAATCAGCATCAGCTGGGCACA	20	PASS	ClusterIDs=HG4_PB_HySA_24340:HG2_PB_assemblyticsfalcon_10603:HG3_Ill_GATKHCSBGrefine_10882:HG3_PB_SVrefine2PBcRDovetail_8060:HG4_Ill_MetaSV_2014:HG4_Ill_GATKHCSBGrefine_11308:HG2_PB_SVrefine2Falcon1plusDovetail_4747:HG2_Ill_GATKHCSBGrefine_10948:HG2_PB_PB10Xdip_13107:HG4_PB_pbsv_16616:HG2_PB_HySA_30435:HG2_PB_assemblyticsPBcR_10208:HG3_PB_assemblyticsfalcon_10591:HG2_Ill_MetaSV_1941:HG3_Ill_MetaSV_2081:HG4_Ill_SVrefine2DISCOVARDovetail_11662:HG2_PB_pbsv_16696:HG2_PB_SVrefine2PB10Xhap12_12113:HG2_PB_SVrefine2PBcRplusDovetail_4363:HG2_PB_SVrefine2Falcon2Bionano_8228:HG3_PB_SVrefine2Falcon1Dovetail_10311:HG4_PB_SVrefine2PBcRDovetail_8334:HG4_PB_SVrefine2Falcon1Dovetail_10329;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_4363;NumExactMatchSVs=1;ClusterMaxShiftDist=0.149171;ClusterMaxSizeDiff=0.149171;ClusterMaxEditDist=0.283149;PBcalls=16;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=733;DistBack=19114;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=17:29119904-29119945;PctSeqSimilarity=0.9961;PctSizeSimilarity=0.9986;PctRecOverlap=0.9482;SizeDiff=1;StartDistance=-38;EndDistance=-38;GTMatch=0;TruScore=98;MatchId=2199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:28:1:18:1/1:0:17:0:9:1/1:0:33:1/1:4:162:.:.:.
chr17	29842486	HG4_PB_SVrefine2Falcon1Dovetail_10330	A	TCTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTTCTCCTGCCTCAGCCTCCCAAGTAGGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGCCTATTGCCATTAATAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8063:HG3_PB_HySA_25208:HG3_PB_pbsv_16352:HG4_PB_SVrefine2Falcon1Dovetail_10330:HG3_PB_SVrefine2Falcon1Dovetail_10312:HG2_PB_pbsv_16700:HG2_PB_assemblyticsfalcon_10610:HG2_Ill_breakscan11_4717:HG2_PB_HySA_30439:HG2_PB_SVrefine2Falcon1plusDovetail_4750:HG3_PB_assemblyticsfalcon_10597:HG2_PB_SVrefine2Falcon2Bionano_8232;NumClusterSVs=12;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_10330;NumExactMatchSVs=1;ClusterMaxShiftDist=0.198813;ClusterMaxSizeDiff=0.195846;ClusterMaxEditDist=0.244776;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=360;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:29842487-29842485;PctSeqSimilarity=0.9785;PctSizeSimilarity=0.9972;PctRecOverlap=0.964;SizeDiff=1;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=97;MatchId=2200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:./.:7:9:16:17:./.:2:4:23:0:0/1:30:6:0/1:15:26:.:.:.
chr17	30002961	HG4_Ill_scalpel_15204	C	CCTTTAGCTAGACACAGAGCACTGATTGCTGTATTTTTACAGAGTGCTGATTGGTGCATTTACACAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5116:HG2_PB_HySA_30440:HG2_PB_pbsv_16701:HG2_PB_PB10Xdip_13109:HG4_Ill_svaba_20585:HG4_Ill_scalpel_15204:HG4_Ill_Krunchall_22707:HG4_Ill_GATKHC_26387:HG4_Ill_GATKHCSBGrefine_11312:HG4_Ill_250bpfermikitraw_21694:HG4_Ill_150bpfermikitraw_20884:HG3_Ill_svaba_20789:HG3_Ill_scalpel_15868:HG3_Ill_Krunchall_21938:HG3_Ill_GATKHC_26255:HG3_Ill_GATKHCSBGrefine_10890:HG3_Ill_250bpfermikitraw_21381:HG3_Ill_150bpfermikitraw_20805:HG2_Ill_svaba_20605:HG2_Ill_scalpel_15562:HG2_Ill_Krunchall_22367:HG2_Ill_GATKHC_26422:HG2_Ill_GATKHCSBGrefine_10954:HG2_Ill_250bpfermikitraw_22034:HG2_Ill_150bpfermikitraw_20751:HG4_PB_SVrefine2PBcRDovetail_8337:HG3_PB_SVrefine2PBcRDovetail_8064:HG3_Ill_SVrefine2DISCOVARDovetail_11882:HG2_PB_SVrefine2PB10Xhap12_12117:HG2_PB_SVrefine2Falcon2Bionano_8233:HG2_PB_SVrefine2Falcon1plusDovetail_4751;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20751:HG2_Ill_250bpfermikitraw_22034:HG2_Ill_GATKHCSBGrefine_10954:HG2_Ill_GATKHC_26422:HG2_Ill_Krunchall_22367:HG2_Ill_scalpel_15562:HG2_Ill_svaba_20605:HG3_Ill_150bpfermikitraw_20805:HG3_Ill_250bpfermikitraw_21381:HG3_Ill_GATKHCSBGrefine_10890:HG3_Ill_GATKHC_26255:HG3_Ill_Krunchall_21938:HG3_Ill_scalpel_15868:HG3_Ill_svaba_20789:HG4_Ill_150bpfermikitraw_20884:HG4_Ill_250bpfermikitraw_21694:HG4_Ill_GATKHCSBGrefine_11312:HG4_Ill_GATKHC_26387:HG4_Ill_Krunchall_22707:HG4_Ill_scalpel_15204:HG4_Ill_svaba_20585;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0895522;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.251852;PBcalls=8;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=66;DistBack=33;DistForward=27;DistMin=27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=201;REFWIDENED=17:30002862-30003062;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:./.:1:10:0:4:./.:1:14:3:15:./.:2:30:./.:.:.:.:.:.
chr17	30603639	HG2_PB_SVrefine2Falcon2Bionano_8235	T	TGCACCATACTTCAGCCCTAGCACCGTACTCCAGCCCTAGCACCGGACTCCAGCGCTAGCACCGTACTCCAGCCCTAGCACAGTACTCCGGCCCTAGCACCTTACTCCGGCCCTAGCACCTTACTCCGGCCCTAGCACCTTACTCCAGCCCTAGCACAGTACTCCAGCCCTAGCACAGTACTCCGGCCCTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10333:HG2_PB_PB10Xdip_13112:HG4_PB_pbsv_16624:HG3_Ill_GATKHC_26260:HG2_PB_pbsv_16705:HG2_PB_HySA_30444:HG3_PB_pbsv_16356:HG3_PB_SVrefine2PBcRDovetail_8066:HG3_PB_SVrefine2Falcon1Dovetail_10314:HG2_PB_SVrefine2PBcRplusDovetail_4365:HG2_PB_SVrefine2PB10Xhap12_12122:HG2_PB_SVrefine2Falcon2Bionano_8235:HG2_PB_SVrefine2Falcon1plusDovetail_4754;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4754:HG2_PB_SVrefine2Falcon2Bionano_8235:HG2_PB_SVrefine2PB10Xhap12_12122:HG2_PB_SVrefine2PBcRplusDovetail_4365:HG3_PB_SVrefine2Falcon1Dovetail_10314;NumExactMatchSVs=5;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.241287;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=190;DistBack=47775;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=384;REFWIDENED=17:30603640-30604023;PctSeqSimilarity=0.9711;PctSizeSimilarity=0.9896;PctRecOverlap=0.285;SizeDiff=-2;StartDistance=-137;EndDistance=-137;GTMatch=0;TruScore=74;MatchId=2202.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:2:15:0:14:./.:0:4:0:8:./.:1:6:./.:.:.:.:.:.
chr17	30637569	HG2_PB_SVrefine2Falcon2Bionano_8236	T	TAAAAATACAAAAATTAGGTGGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCAGAAGGCTGAGGCAGAAGAATCGCTTGAACTCGGGAGGCGGAGGTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGATAGAGACTCCGTCTAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10315:HG3_PB_HySA_25213:HG2_PB_pbsv_16706:HG3_PB_pbsv_16357:HG2_PB_HySA_30446:HG4_PB_pbsv_16625:HG2_PB_PB10Xdip_13113:HG4_PB_SVrefine2Falcon1Dovetail_10334:HG2_PB_SVrefine2PBcRplusDovetail_4366:HG2_PB_SVrefine2PB10Xhap12_12123:HG2_PB_SVrefine2Falcon2Bionano_8236:HG2_PB_SVrefine2Falcon1plusDovetail_4755:HG2_Ill_SVrefine2DISCOVARplusDovetail_5117;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5117:HG2_PB_SVrefine2Falcon1plusDovetail_4755:HG2_PB_SVrefine2Falcon2Bionano_8236:HG2_PB_SVrefine2PB10Xhap12_12123:HG2_PB_SVrefine2PBcRplusDovetail_4366;NumExactMatchSVs=5;ClusterMaxShiftDist=0.106825;ClusterMaxSizeDiff=0.0890208;ClusterMaxEditDist=0.302326;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=168;DistBack=33707;DistForward=167;DistMin=167;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9120;REFWIDENED=17:30647416-30637910;PctSeqSimilarity=0.963;PctSizeSimilarity=0.9882;PctRecOverlap=0.0117;SizeDiff=-2;StartDistance=-168;EndDistance=-168;GTMatch=0;TruScore=65;MatchId=2203.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:51:1/1:8:30:0:13:./.:1:0:1:1:./.:6:1:./.:.:.:.:.:.
chr17	30645477	HG2_PB_SVrefine2PBcRplusDovetail_4367	G	GAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGCGTGCCTGTAATCCCAGTTACTCAGGAGTCTGAGGCAGGAGAATCCCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCATGCCACTGCACTCCAGCCTCAGGGACAGAGCGAGACGCGAGACTCTGTCTCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4718:HG2_PB_pbsv_16707:HG4_PB_SVrefine2PBcRDovetail_8338:HG4_PB_pbsv_16626:HG4_PB_HySA_24351:HG3_PB_pbsv_16358:HG2_PB_PB10Xdip_13114:HG4_PB_SVrefine2Falcon1Dovetail_10335:HG4_Ill_manta_3812:HG4_Ill_SVrefine2DISCOVARDovetail_11666:HG4_Ill_MetaSV_2017:HG4_Ill_GATKHCSBGrefine_11318:HG3_Ill_manta_3664:HG3_Ill_Spiral_17062:HG3_Ill_SVrefine2DISCOVARDovetail_11887:HG3_Ill_GATKHCSBGrefine_10894:HG2_PB_SVrefine2PBcRplusDovetail_4367:HG2_PB_SVrefine2PB10Xhap12_12124:HG2_PB_SVrefine2Falcon2Bionano_8237:HG2_PB_SVrefine2Falcon1plusDovetail_4756:HG2_Ill_manta_4488:HG2_Ill_SVrefine2DISCOVARplusDovetail_5118:HG2_Ill_MetaSV_1946:HG2_Ill_GATKHCSBGrefine_10958:HG2_Ill_150bpfermikitraw_20755:HG2_10X_SVrefine210Xhap12_11552:HG3_PB_SVrefine2Falcon1Dovetail_10316:HG3_PB_HySA_25214;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11552:HG2_Ill_150bpfermikitraw_20755:HG2_Ill_GATKHCSBGrefine_10958:HG2_Ill_MetaSV_1946:HG2_Ill_SVrefine2DISCOVARplusDovetail_5118:HG2_Ill_manta_4488:HG2_PB_SVrefine2Falcon1plusDovetail_4756:HG2_PB_SVrefine2Falcon2Bionano_8237:HG2_PB_SVrefine2PB10Xhap12_12124:HG2_PB_SVrefine2PBcRplusDovetail_4367:HG3_Ill_GATKHCSBGrefine_10894:HG3_Ill_SVrefine2DISCOVARDovetail_11887:HG3_Ill_Spiral_17062:HG3_Ill_manta_3664:HG4_Ill_GATKHCSBGrefine_11318:HG4_Ill_MetaSV_2017:HG4_Ill_SVrefine2DISCOVARDovetail_11666:HG4_Ill_manta_3812:HG4_PB_SVrefine2Falcon1Dovetail_10335;NumExactMatchSVs=19;ClusterMaxShiftDist=0.157182;ClusterMaxSizeDiff=0.157182;ClusterMaxEditDist=0.284916;PBcalls=13;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=186;DistBack=-1;DistForward=48823;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=17:30645478-30645481;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2204.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:62:1/1:4:27:0:12:./.:0:4:0:5:1/1:0:21:./.:.:.:.:.:.
chr17	30893848	HG2_Ill_MetaSV_1947	T	TTTAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCGCCACCATGTCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTCAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_pbsv_16627:HG2_Ill_breakscan11_4719:HG3_PB_HySA_25217:HG2_PB_pbsv_16708:HG2_PB_HySA_30449:HG3_PB_pbsv_16359:HG4_PB_assemblyticsfalcon_10415:HG2_PB_assemblyticsfalcon_10618:HG4_Ill_MetaSV_2018:HG2_Ill_MetaSV_1947:HG3_Ill_MetaSV_2085:HG2_PB_SVrefine2Falcon2Bionano_8238:HG4_Ill_GATKHCSBGrefine_11319:HG4_PB_SVrefine2Falcon1Dovetail_10336:HG2_PB_SVrefine2PBcRplusDovetail_4368:HG3_PB_SVrefine2Falcon1Dovetail_10317:HG2_PB_SVrefine2Falcon1plusDovetail_4757:HG2_PB_SVrefine2PB10Xhap12_12125:HG2_PB_PB10Xdip_13115;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_MetaSV_1947:HG4_Ill_MetaSV_2018;NumExactMatchSVs=2;ClusterMaxShiftDist=0.178404;ClusterMaxSizeDiff=0.178404;ClusterMaxEditDist=0.287856;PBcalls=14;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=4468;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=17:30893849-30893862;PctSeqSimilarity=0.9984;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:57:0|1:23:1:0:42:0|1:24:0:0:12:0/1:19:9:0/1:7:30:.:.:.
chr17	31275044	HG4_Ill_GATKHCSBGrefine_11320	C	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCT	20	PASS	ClusterIDs=HG3_PB_HySA_25219:HG2_PB_HySA_30451:HG4_PB_pbsv_16628:HG4_Ill_GATKHC_26395:HG4_Ill_GATKHCSBGrefine_11320:HG2_Ill_GATKHC_26431:HG2_Ill_GATKHCSBGrefine_10960:HG2_PB_PB10Xdip_13116:HG4_PB_HySA_24358:HG2_PB_assemblyticsfalcon_10621:HG3_Ill_Spiral_17066:HG3_Ill_GATKHC_26266:HG3_Ill_GATKHC_26265:HG2_Ill_GATKHC_26430:HG2_Ill_GATKHCSBGrefine_10959:HG3_Ill_GATKHCSBGrefine_10896:HG2_PB_pbsv_16709:HG3_PB_pbsv_16360;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10960:HG2_Ill_GATKHC_26431:HG4_Ill_GATKHCSBGrefine_11320:HG4_Ill_GATKHC_26395;NumExactMatchSVs=4;ClusterMaxShiftDist=0.392157;ClusterMaxSizeDiff=0.392157;ClusterMaxEditDist=0.392157;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=0;DistForward=43580;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=75;REFWIDENED=17:31275032-31275106;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:1/1:3:17:1:16:./.:1:2:2:5:0/1:4:17:./.:.:.:.:.:.
chr17	31684048	HG4_PB_SVrefine2Falcon1Dovetail_10337	C	CCTGGAGGAATTGTTAAAGCGTAAAGCATAGGTTGCTGGGCTCTACCTCCAGAATTTCAGATTCCATTGGTCTGGGCTGGCGACCGAGAGTTTGCCTTTCTAACAGGTTCCCTGGCGGTGCTGATGGGAACTTGTTAGACCTCAGCCCAGACCAACTGAATCTGAAATT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13118:HG2_PB_pbsv_16711:HG3_PB_pbsv_16362:HG4_PB_assemblyticsfalcon_10419:HG2_PB_assemblyticsfalcon_10625:HG2_Ill_breakscan11_4720:HG4_PB_SVrefine2PBcRDovetail_8341:HG4_PB_SVrefine2Falcon1Dovetail_10337:HG4_Ill_SVrefine2DISCOVARDovetail_11670:HG4_Ill_MetaSV_2019:HG4_Ill_GATKHCSBGrefine_11324:HG3_PB_SVrefine2PBcRDovetail_8068:HG3_PB_SVrefine2Falcon1Dovetail_10318:HG3_Ill_manta_3666:HG3_Ill_Spiral_17068:HG3_Ill_SVrefine2DISCOVARDovetail_11892:HG3_Ill_MetaSV_2086:HG3_Ill_GATKHCSBGrefine_10898:HG2_PB_SVrefine2PBcRplusDovetail_4370:HG2_PB_SVrefine2PB10Xhap12_12127:HG2_PB_SVrefine2Falcon2Bionano_8239:HG2_PB_SVrefine2Falcon1plusDovetail_4759:HG2_Ill_manta_4489:HG2_Ill_SpiralSDKrefine_6723:HG2_Ill_SVrefine2DISCOVARplusDovetail_5121:HG2_Ill_MetaSV_1948:HG2_Ill_GATKHCSBGrefine_10962:HG2_10X_SVrefine210Xhap12_11554;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11554:HG2_Ill_GATKHCSBGrefine_10962:HG2_Ill_MetaSV_1948:HG2_Ill_SVrefine2DISCOVARplusDovetail_5121:HG2_Ill_SpiralSDKrefine_6723:HG2_Ill_manta_4489:HG2_PB_SVrefine2Falcon1plusDovetail_4759:HG2_PB_SVrefine2Falcon2Bionano_8239:HG2_PB_SVrefine2PB10Xhap12_12127:HG2_PB_SVrefine2PBcRplusDovetail_4370:HG3_Ill_GATKHCSBGrefine_10898:HG3_Ill_MetaSV_2086:HG3_Ill_SVrefine2DISCOVARDovetail_11892:HG3_Ill_Spiral_17068:HG3_Ill_manta_3666:HG3_PB_SVrefine2Falcon1Dovetail_10318:HG3_PB_SVrefine2PBcRDovetail_8068:HG4_Ill_GATKHCSBGrefine_11324:HG4_Ill_MetaSV_2019:HG4_Ill_SVrefine2DISCOVARDovetail_11670:HG4_PB_SVrefine2Falcon1Dovetail_10337:HG4_PB_SVrefine2PBcRDovetail_8341;NumExactMatchSVs=22;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.158824;PBcalls=13;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=168;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=17:31684049-31684055;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:1/1:0:40:1:31:1/1:0:24:1:28:1/1:0:33:./.:.:.:.:.:.
chr17	32338054	HG3_Ill_SVrefine2DISCOVARDovetail_11895	A	ACACACACACACACACACACACACACACAGACACAGATGCCTCCAGACACATGAACACACACACACACACACACACAGACACAGACACAGATGCCTCCAGTCTCTCTCTCTCACACACACACACACACAGACACACACATGCCTCCAGGCAGACACATGCAGACACGCACAGACACACACAGATGCCTCCAGACACATGAACACACATAGACACACACATACACACACACAGATGCCTCCAGT	20	PASS	ClusterIDs=HG4_PB_HySA_24369:HG3_PB_SVrefine2Falcon1Dovetail_10319:HG2_PB_PB10Xdip_13120:HG2_PB_pbsv_16713:HG4_PB_pbsv_16635:HG3_PB_pbsv_16365:HG2_PB_SVrefine2PBcRplusDovetail_4372:HG2_PB_SVrefine2PB10Xhap12_12129:HG2_10X_SVrefine210Xhap12_11557:HG2_PB_SVrefine2Falcon2Bionano_8241:HG4_PB_SVrefine2PBcRDovetail_8343:HG3_Ill_GATKHCSBGrefine_10901:HG4_PB_SVrefine2Falcon1Dovetail_10339:HG3_PB_SVrefine2PBcRDovetail_8070:HG3_Ill_SVrefine2DISCOVARDovetail_11895:HG3_Ill_MetaSV_2088:HG2_PB_SVrefine2Falcon1plusDovetail_4761:HG2_Ill_MetaSV_1950:HG2_Ill_SVrefine2DISCOVARplusDovetail_5124;NumClusterSVs=19;ExactMatchIDs=HG3_Ill_MetaSV_2088:HG3_Ill_SVrefine2DISCOVARDovetail_11895:HG3_PB_SVrefine2PBcRDovetail_8070:HG4_PB_SVrefine2Falcon1Dovetail_10339;NumExactMatchSVs=4;ClusterMaxShiftDist=0.222656;ClusterMaxSizeDiff=0.210938;ClusterMaxEditDist=0.324219;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=242;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=17:32338055-32338082;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2208.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:56:1/1:3:21:3:20:./.:6:73:9:64:./.:1:6:./.:.:.:.:.:.
chr17	32673408	HG2_PB_SVrefine2PBcRplusDovetail_4373	A	ACTAGGTAAACATAACACCTAGATACATCCGTAAGGCATTTGTTTCCTATCACATGGCCCATTCTAGCTTAACACCCACCAACTGAGATATAGTGAAATACTAAAATTGAATGCTCAGATTATATTTTTATCCAACCAAAAAGTTCTTTAAATATAAAATTAAAAATTCCTCACTTAAAAAAATTTCTCATCACTGGTCATCAGAGAAATTTTTCTTAAGTGAGGAATTTTTTAATTTTATATTTAAAGAACTTTTTGGTTGGATAAAAATATAATCTGAGCATCCAATTTTAGTATTTCACTATATCTCAGTTGGTGGGTGTTAAGCTAGAATGGGCCATGTGATAGGAAACAAATGCCTTACGGATGTAT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_10967:HG3_PB_pbsv_16367:HG4_PB_pbsv_16637:HG2_PB_pbsv_16715:HG4_PB_HySA_24372:HG3_PB_assemblyticsfalcon_10621:HG2_PB_assemblyticsfalcon_10636:HG2_PB_assemblyticsPBcR_10241:HG4_PB_assemblyticsfalcon_10429:HG2_Ill_breakscan11_4721:HG2_PB_PB10Xdip_13121:HG2_PB_SVrefine2Falcon2Bionano_8242:HG3_Ill_MetaSV_2089:HG2_Ill_MetaSV_1951:HG4_Ill_MetaSV_2020:HG4_PB_SVrefine2Falcon1Dovetail_10341:HG3_PB_SVrefine2PBcRDovetail_8071:HG3_PB_SVrefine2Falcon1Dovetail_10320:HG3_Ill_SVrefine2DISCOVARDovetail_11897:HG3_Ill_GATKHCSBGrefine_10904:HG2_PB_SVrefine2PBcRplusDovetail_4373:HG2_PB_SVrefine2PB10Xhap12_12130:HG2_PB_SVrefine2Falcon1plusDovetail_4762:HG2_10X_SVrefine210Xhap12_11558:HG4_PB_SVrefine2PBcRDovetail_8344:HG4_Ill_SVrefine2DISCOVARDovetail_11673:HG4_Ill_GATKHCSBGrefine_11330:HG2_Ill_SVrefine2DISCOVARplusDovetail_5125;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11558:HG2_PB_SVrefine2Falcon1plusDovetail_4762:HG2_PB_SVrefine2PB10Xhap12_12130:HG2_PB_SVrefine2PBcRplusDovetail_4373:HG3_Ill_GATKHCSBGrefine_10904:HG3_Ill_SVrefine2DISCOVARDovetail_11897:HG3_PB_SVrefine2Falcon1Dovetail_10320:HG3_PB_SVrefine2PBcRDovetail_8071:HG4_PB_SVrefine2Falcon1Dovetail_10341;NumExactMatchSVs=9;ClusterMaxShiftDist=0.108322;ClusterMaxSizeDiff=0.0766182;ClusterMaxEditDist=0.221629;PBcalls=17;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=371;DistBack=44144;DistForward=56484;DistMin=44144;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=17:32673409-32673414;PctSeqSimilarity=0.9987;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2209.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:84:1/1:0:24:0:31:./.:0:25:0:2:1/1:0:25:1/1:2:54:.:.:.
chr17	32734412	HG4_PB_SVrefine2Falcon1Dovetail_10342	C	TATAAAAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAT	10	PASS	ClusterIDs=HG2_PB_HySA_30462:HG4_PB_pbsv_16638:HG4_PB_assemblyticsfalcon_10430:HG2_PB_PB10Xdip_13122:HG4_PB_SVrefine2Falcon1Dovetail_10342:HG3_PB_HySA_25228:HG3_PB_pbsv_16368:HG2_PB_SVrefine2Falcon2Bionano_8243:HG2_PB_SVrefine2PB10Xhap12_12131:HG2_PB_SVrefine2Falcon1plusDovetail_4763:HG3_PB_SVrefine2PBcRDovetail_8072;NumClusterSVs=11;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_10342:HG4_PB_assemblyticsfalcon_10430;NumExactMatchSVs=2;ClusterMaxShiftDist=0.250386;ClusterMaxSizeDiff=0.250386;ClusterMaxEditDist=0.253478;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=333;DistBack=-1;DistForward=9;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:32734413-32734411;PctSeqSimilarity=0.9941;PctSizeSimilarity=0.997;PctRecOverlap=0.9761;SizeDiff=-1;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=98;MatchId=2210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:31:0|1:25:0:1:24:./.:1:3:27:0:0/1:37:9:0/1:7:25:.:.:.
chr17	33304710	HG2_PB_SVrefine2Falcon1plusDovetail_4765	G	GGATCACCTGAGGTTGGGAGTTTGAGACCAGCCTGACCAACATGGAGAAACCCCATCTCTACTAAAAATACAAAATTAGCAGGGGGTGGTGGTGCATGTCTGTAATCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAAGCAGAGATTGTGGTGAGCTGTGATCACGCCATTGCACTCCAGCCTGGGCAACAGGAGTGAAACTCCGTCTCAAAAAAAAAAAAAGAGAAAAAAGAAAAGAAAATGGTACACCGCATAGGGCGCTTACCATGAATGAAGCTTACAGGACTAGAAGTTGCTCTGGGTGGGTCAGTGAGTGAGTGGTGTGTGAATATGAAGGCCTAGCACATTATTCTACCTTACTCTGGACTTTATAAAGTGTACACTTAGGCAACACTAAATTTACTTTAAAAATTTCTTCTTTTTCAATAATAAATTAACCTTAGCTTACTGTTTACTTTTTTACTTTATAAGCTTTTTAATTTTTCTTTCTTTTTTTTTGTTTTTTTTCTTTGAGATAGTCTCACTCTGTTGCCCAGGCTGCAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGAGATTCTCCTGCCTCAGCCTCCTGAGTAGCTAGGATTACAGGCGCATGCCACCATGCCTAATTTTTGTATTTTTAGTAGAGATGGGATTTCGCCATGTTGGCCAGGCTGGTCTCGAACTCTTGACCTCAGGTGATCCACCCGCCTCAGCCTTCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGATGGGCCCTGTTTGTGTTTTAAACTAAAGGTTATTACAAAAGAATCAAGTATTTTAAAATTAAAAAGCTTAGCTGGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10344:HG2_PB_pbsv_16718:HG4_PB_pbsv_16640:HG3_PB_HySA_25231:HG3_PB_pbsv_16370:HG4_PB_HySA_24376:HG2_PB_PB10Xdip_13135:HG2_PB_HySA_30470:HG4_Ill_MetaSV_2022:HG4_Ill_GATKHCSBGrefine_11331:HG3_Ill_MetaSV_2091:HG3_Ill_GATKHCSBGrefine_10907:HG2_Ill_MetaSV_1952:HG2_Ill_GATKHCSBGrefine_10969:HG2_PB_HySA_30469:HG3_PB_SVrefine2Falcon1Dovetail_10322:HG4_PB_SVrefine2PBcRDovetail_8347:HG4_Ill_SVrefine2DISCOVARDovetail_11675:HG3_PB_SVrefine2PBcRDovetail_8074:HG3_Ill_SVrefine2DISCOVARDovetail_11898:HG2_PB_SVrefine2PBcRplusDovetail_4375:HG2_PB_SVrefine2PB10Xhap12_12133:HG2_PB_SVrefine2Falcon2Bionano_8244:HG2_PB_SVrefine2Falcon1plusDovetail_4765:HG2_Ill_SVrefine2DISCOVARplusDovetail_5127:HG2_10X_SVrefine210Xhap12_11559;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11559:HG2_Ill_SVrefine2DISCOVARplusDovetail_5127:HG2_PB_SVrefine2Falcon1plusDovetail_4765:HG2_PB_SVrefine2Falcon2Bionano_8244:HG2_PB_SVrefine2PB10Xhap12_12133:HG2_PB_SVrefine2PBcRplusDovetail_4375:HG3_Ill_SVrefine2DISCOVARDovetail_11898:HG3_PB_SVrefine2PBcRDovetail_8074:HG4_Ill_SVrefine2DISCOVARDovetail_11675:HG4_PB_SVrefine2PBcRDovetail_8347;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0562771;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.201264;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=913;DistBack=65244;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=238;REFWIDENED=17:33304711-33304948;PctSeqSimilarity=0.9964;PctSizeSimilarity=1;PctRecOverlap=0.9507;SizeDiff=0;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=98;MatchId=2211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:108:1/1:1:30:1:39:./.:0:6:0:4:1/1:0:26:./.:16:176:.:.:.
chr17	35427968	HG2_10X_SVrefine210Xhap12_11565	C	CTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACAAGGTCAGGAGATCGAGACCAGCCTGGCCAACACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAATTAGCCGGGCGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGCGACAGAGTGAGTCTCCATCTCAAAAAAAAAAAAAAAAATTAGGATACGTTTGTTAATTTATTTTGCTTTTCCTTCTTCTTCTTCTTTTTTTTTTTTT	20	PASS	ClusterIDs=HG4_PB_pbsv_16646:HG4_Ill_MetaSV_2025:HG2_PB_pbsv_16724:HG4_PB_assemblyticsfalcon_10449:HG2_PB_SVrefine2Falcon1plusDovetail_4769:HG2_Ill_MetaSV_1955:HG3_Ill_SVrefine2DISCOVARDovetail_11912:HG3_Ill_MetaSV_2095:HG3_Ill_GATKHCSBGrefine_10914:HG2_Ill_SVrefine2DISCOVARplusDovetail_5138:HG2_10X_SVrefine210Xhap12_11565:HG2_PB_SVrefine2PB10Xhap12_12137:HG4_PB_SVrefine2PBcRDovetail_8351;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11565:HG2_Ill_SVrefine2DISCOVARplusDovetail_5138:HG3_Ill_GATKHCSBGrefine_10914:HG3_Ill_MetaSV_2095:HG3_Ill_SVrefine2DISCOVARDovetail_11912;NumExactMatchSVs=5;ClusterMaxShiftDist=0.101892;ClusterMaxSizeDiff=0.0902475;ClusterMaxEditDist=0.244382;PBcalls=6;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=342;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=17:35427969-35427970;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9971;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=2213.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:2:29:0:22:1/1:0:18:0:11:1/1:0:26:1/1:2:66:.:.:.
chr17	35922015	HG3_Ill_MetaSV_2096	T	TAAAGAATGATGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGTTAACAATGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4722:HG4_PB_pbsv_16648:HG2_PB_pbsv_16726:HG4_PB_assemblyticsfalcon_10452:HG3_PB_pbsv_16378:HG4_PB_SVrefine2Falcon1Dovetail_10347:HG4_Ill_MetaSV_2026:HG4_Ill_GATKHCSBGrefine_11339:HG3_Ill_MetaSV_2096:HG3_Ill_GATKHCSBGrefine_10917:HG2_PB_SVrefine2Falcon1plusDovetail_4771:HG2_Ill_MetaSV_1957:HG2_Ill_GATKHCSBGrefine_10975:HG2_10X_SVrefine210Xhap12_11567:HG2_PB_HySA_30479;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11567:HG2_Ill_GATKHCSBGrefine_10975:HG2_Ill_MetaSV_1957:HG2_PB_SVrefine2Falcon1plusDovetail_4771:HG3_Ill_GATKHCSBGrefine_10917:HG3_Ill_MetaSV_2096:HG4_Ill_GATKHCSBGrefine_11339:HG4_Ill_MetaSV_2026;NumExactMatchSVs=8;ClusterMaxShiftDist=0.133956;ClusterMaxSizeDiff=0.133956;ClusterMaxEditDist=0.190031;PBcalls=7;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=317;DistBack=52615;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=17:35922016-35922028;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:35:0|1:21:1:1:28:1|0:0:7:22:0:0/1:37:12:0/1:11:29:.:.:.
chr17	36169329	HG2_Ill_GATKHCSBGrefine_10977	T	TGGATATCTTCTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGGGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13163:HG2_PB_pbsv_16727:HG3_PB_pbsv_16381:HG4_PB_pbsv_16649:HG4_Ill_GATKHCSBGrefine_11341:HG4_PB_assemblyticsfalcon_10454:HG3_Ill_manta_3672:HG3_Ill_MetaSV_2097:HG3_Ill_GATKHCSBGrefine_10920:HG2_PB_SVrefine2PB10Xhap12_12140:HG2_Ill_MetaSV_1958:HG2_Ill_GATKHCSBGrefine_10977:HG2_10X_SVrefine210Xhap12_11568:HG2_PB_SVrefine2Falcon1plusDovetail_4772;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11568:HG2_Ill_GATKHCSBGrefine_10977:HG2_Ill_MetaSV_1958:HG2_PB_SVrefine2PB10Xhap12_12140:HG3_Ill_GATKHCSBGrefine_10920:HG3_Ill_MetaSV_2097:HG3_Ill_manta_3672:HG4_Ill_GATKHCSBGrefine_11341;NumExactMatchSVs=8;ClusterMaxShiftDist=0.146819;ClusterMaxSizeDiff=0.146819;ClusterMaxEditDist=0.212625;PBcalls=7;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=306;DistBack=673;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2264;REFWIDENED=17:36169330-36159524;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:./.:0:0:0:0:1/1:0:6:0:6:1/1:0:31:1/1:2:71:.:.:.
chr17	36788000	HG4_PB_pbsv_16656	C	CACAGCCGCCCCGTCTGGGAGGAGGTGGGGGGGTCAGCCCAACCGCCCGGCCAGCTGCCCCATCCGGGGAGGTGAGGGTCCTCTGCCGGCGCCCCTACTGGGAGTTGAGGAGCCCCTATGCCTGGGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8354:HG2_PB_SVrefine2PB10Xhap12_12146:HG4_PB_pbsv_16656:HG2_PB_assemblyticsfalcon_10665:HG2_PB_SVrefine2Falcon1plusDovetail_4773:HG2_PB_pbsv_16733:HG3_PB_SVrefine2Falcon1Dovetail_10328:HG3_PB_assemblyticsfalcon_10651:HG4_PB_SVrefine2Falcon1Dovetail_10352;NumClusterSVs=9;ExactMatchIDs=HG4_PB_pbsv_16656;NumExactMatchSVs=1;ClusterMaxShiftDist=0.056;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.27451;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=126;DistBack=69;DistForward=13334;DistMin=69;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=269;REFWIDENED=17:36787732-36788000;PctSeqSimilarity=0.9422;PctSizeSimilarity=0.9767;PctRecOverlap=0.7132;SizeDiff=-3;StartDistance=36;EndDistance=36;GTMatch=0;TruScore=87;MatchId=2217.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:26:1|0:4:14:25:7:./.:2:0:5:0:./.:5:0:./.:.:.:.:.:.
chr17	38006908	HG4_PB_pbsv_16663	A	AAATAATACTAATAGCATATTTAGATATGTATATATTATTATATTAGTATATATACTATATAGCATCTTAGATATGTATAATATAATATATATACTATATATTATATTACATAATCTAATATGCTATATGTTAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4723:HG4_PB_pbsv_16663:HG2_PB_pbsv_16740:HG3_PB_pbsv_16394:HG2_PB_PB10Xdip_13211:HG3_PB_HySA_25253:HG2_PB_HySA_30500;NumClusterSVs=7;ExactMatchIDs=HG4_PB_pbsv_16663;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0613027;ClusterMaxSizeDiff=0.0610687;ClusterMaxEditDist=0.171642;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=133;DistBack=9;DistForward=12;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=17:38006907-38006909;PctSeqSimilarity=0.9291;PctSizeSimilarity=0.9549;PctRecOverlap=0.9023;SizeDiff=6;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=92;MatchId=2219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:48:./.:0:0:0:0:./.:1:4:3:7:0/1:6:24:./.:.:.:.:.:.
chr17	38665785	HG4_Ill_GATKHCSBGrefine_11355	A	ACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACTGCGCCCTGCCTCTTTCTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTCTCTCTCTCTCTCCTTCCTTCCTTCTCTCTCTCTTTCTTTGTTTTTGTTTTTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTTACTGCAACCTCCAGCTCCCAGGTTTAAGCAATTCTCCCTGCCTCACCTTCCTGAGTAGCTGGGATTACAGGCGCCTGCCACAACGCCTGGCTAATTTTTGTATTTTTTAGTAGATGTGTTTTTGCCATGTTGGCCAGGCTGTTTTTGAACTCCTGACCTCAGGTGATCCGCCCTCCTCGACCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCACTGTGCCCCGCCTCTTTCTTTCTTTAAAAAAAATTTATTCGTTTTTTTATTTTTGTAGAGATGGGGGTCTCACTATGGTGCCCAGGCTGGTCTTGAACTCCTGGACTCAATCCTCCTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11586:HG3_PB_HySA_25256:HG3_PB_pbsv_16397:HG4_PB_pbsv_16666:HG2_PB_pbsv_16743:HG2_PB_HySA_30504:HG2_PB_PB10Xdip_13214:HG4_PB_HySA_24397:HG4_Ill_MetaSV_2033:HG4_Ill_GATKHCSBGrefine_11355:HG2_Ill_MetaSV_1965:HG2_Ill_GATKHCSBGrefine_10988:HG2_PB_SVrefine2Falcon1plusDovetail_4778:HG4_PB_SVrefine2PBcRDovetail_8360:HG4_Ill_SVrefine2DISCOVARDovetail_11697:HG2_Ill_SVrefine2DISCOVARplusDovetail_5146:HG3_Ill_SVrefine2DISCOVARDovetail_11929:HG2_PB_SVrefine2PBcRplusDovetail_4383:HG2_PB_SVrefine2PB10Xhap12_12155:HG4_PB_SVrefine2Falcon1Dovetail_10359:HG3_PB_SVrefine2Falcon1Dovetail_10333:HG3_PB_SVrefine2PBcRDovetail_8082;NumClusterSVs=22;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_11355:HG4_Ill_MetaSV_2033;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0616438;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.191688;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=571;DistBack=-64;DistForward=63;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=144;REFWIDENED=17:38665706-38665849;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.9662;PctRecOverlap=0.9662;SizeDiff=-20;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2220.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:./.:1:34:0:2:1/1:0:8:0:12:1/1:0:29:1/1:4:97:.:1490:.
chr17	38679441	HG3_Ill_GATKHCSBGrefine_10931	A	AGCTCCATATTTGTCTGACTAATGGGCCTAACTCTGCCTGGGTGGGAGGCAAAGGTAGAGGGAGGAAGAAGGCAGAGCTCAAGGCCTGAGATGTTTTCTTCTGACTTGTGCTGCCCAAGGCGGTAAAGAGAAGAACAGAGAAAGCATCCTGCCCCAGCCCTGCCCCAGAGCTAAACGTCATTCTAGAGAATGAAAAATTCCATCTCCACCCAGTGGGTTCTCAGAATTCCAGGTGAGCTCTGTCTGGTCTAACTGTCTTTCTTCCTCTGACTGTGTCTCATGGGGTGGGGCAAGGGCCAAGCCAAACCAAGGATCTGTCTCGTGGGGTGGAACGTGTTTACTTGTGTTTGGCAAAGTGGCAGGGTTGGCTACAGAGGTCATGACAACAGCTCAGAAGCTCCTGCAAGAAAGGAACAAAGTGTTTGCGTTGTGGACAAGTTAGAATCTGTCTGTCTGGGTCATAGTTTGGCTTCCTTTCTTCCTCCCTCCCTCCCTCTCTCCCTTCCCTTTCCCTCCCTCCCTTCCTTCCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTACCTTCCTCTTTCTCTTTTTCTTTCTTTCTTTTTTTTTTTTTGAGACAGGGTCTTACCCTGTCGCCCAGGCTGGATTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCCCCCTCCTGGGCTCAAGTGATTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCATGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGT	20	PASS	ClusterIDs=HG2_PB_pbsv_16744:HG4_PB_pbsv_16667:HG3_PB_pbsv_16398:HG2_PB_assemblyticsfalcon_10683:HG2_PB_HySA_30505:HG2_PB_PB10Xdip_13215:HG4_PB_HySA_24398:HG4_Ill_SVrefine2DISCOVARDovetail_11698:HG4_Ill_MetaSV_2034:HG4_Ill_GATKHCSBGrefine_11356:HG3_PB_SVrefine2PBcRDovetail_8083:HG3_Ill_SVrefine2DISCOVARDovetail_11930:HG3_Ill_MetaSV_2103:HG3_Ill_GATKHCSBGrefine_10931:HG2_PB_SVrefine2PBcRplusDovetail_4384:HG2_PB_SVrefine2PB10Xhap12_12156:HG2_Ill_MetaSV_1966:HG2_Ill_GATKHCSBGrefine_10989:HG2_10X_SVrefine210Xhap12_11587:HG4_PB_SVrefine2PBcRDovetail_8361:HG2_PB_SVrefine2Falcon1plusDovetail_4779:HG4_PB_SVrefine2Falcon1Dovetail_10360:HG3_PB_SVrefine2Falcon1Dovetail_10334:HG2_Ill_breakscan11_4724;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11587:HG2_Ill_GATKHCSBGrefine_10989:HG2_Ill_MetaSV_1966:HG2_PB_SVrefine2PB10Xhap12_12156:HG2_PB_SVrefine2PBcRplusDovetail_4384:HG3_Ill_GATKHCSBGrefine_10931:HG3_Ill_MetaSV_2103:HG3_Ill_SVrefine2DISCOVARDovetail_11930:HG3_PB_SVrefine2PBcRDovetail_8083:HG4_Ill_GATKHCSBGrefine_11356:HG4_Ill_MetaSV_2034:HG4_Ill_SVrefine2DISCOVARDovetail_11698;NumExactMatchSVs=12;ClusterMaxShiftDist=0.058006;ClusterMaxSizeDiff=0.0495468;ClusterMaxEditDist=0.17339;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=820;DistBack=0;DistForward=15949;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=17:38679442-38679442;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:94:1/1:0:35:0:17:1/1:0:13:0:13:1/1:0:42:./.:7:121:.:1490:.
chr17	39104097	HG3_Ill_manta_3677	T	TAGCAGTGAACTATGAGTTCACTGCTCCACTCTACCTTAAGCCCCAGTTATTATAACTTGATGTGAACAATGTAACATATGGAAAGTTCACATCGTGTTATAATAACTGGGGTTTAAGGTAGAGTGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13216:HG4_PB_pbsv_16668:HG2_PB_assemblyticsfalcon_10684:HG2_PB_pbsv_16745:HG4_PB_HySA_24401:HG3_PB_SVrefine2PBcRDovetail_8084:HG3_PB_pbsv_16399:HG3_PB_SVrefine2Falcon1Dovetail_10335:HG3_Ill_manta_3677:HG3_Ill_Spiral_17105:HG3_Ill_SVrefine2DISCOVARDovetail_11932:HG3_Ill_GATKHCSBGrefine_10932:HG2_PB_SVrefine2PBcRplusDovetail_4385:HG4_PB_SVrefine2PBcRDovetail_8362:HG4_PB_SVrefine2Falcon1Dovetail_10361:HG2_PB_SVrefine2PB10Xhap12_12157:HG2_Ill_MetaSV_1967:HG2_Ill_GATKHCSBGrefine_10990:HG2_10X_SVrefine210Xhap12_11590:HG4_Ill_manta_3823:HG4_Ill_SVrefine2DISCOVARDovetail_11700:HG4_Ill_MetaSV_2035:HG4_Ill_GATKHCSBGrefine_11357:HG2_PB_SVrefine2Falcon1plusDovetail_4780:HG2_PB_HySA_30507:HG2_Ill_breakscan11_4725;NumClusterSVs=26;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_4385:HG3_Ill_GATKHCSBGrefine_10932:HG3_Ill_SVrefine2DISCOVARDovetail_11932:HG3_Ill_Spiral_17105:HG3_Ill_manta_3677:HG3_PB_SVrefine2Falcon1Dovetail_10335:HG3_PB_SVrefine2PBcRDovetail_8084;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0866142;ClusterMaxSizeDiff=0.078125;ClusterMaxEditDist=0.243346;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=126;DistBack=5465;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=19;REFWIDENED=17:39104098-39104116;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2222.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:1:30:1:36:./.:15:23:14:30:0/1:8:20:./.:.:.:.:.:.
chr17	39886356	HG4_PB_HySA_24406	A	AAGAAAGAAAGAAAAGAAAGAAAGAAAAGAAAAAGAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAGAAG	10	PASS	ClusterIDs=HG4_PB_HySA_24406:HG2_PB_HySA_30511:HG3_PB_SVrefine2Falcon1Dovetail_10346:HG4_PB_SVrefine2Falcon1Dovetail_10373;NumClusterSVs=4;ExactMatchIDs=HG4_PB_HySA_24406;NumExactMatchSVs=1;ClusterMaxShiftDist=0.185567;ClusterMaxSizeDiff=0.185567;ClusterMaxEditDist=0.247423;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=87;DistBack=0;DistForward=13;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=114;REFWIDENED=17:39886269-39886382;PctSeqSimilarity=0.9321;PctSizeSimilarity=0.9885;PctRecOverlap=0.7356;SizeDiff=1;StartDistance=-23;EndDistance=-23;GTMatch=0;TruScore=88;MatchId=2224.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:25:./.:1:5:1:2:./.:0:2:1:2:./.:2:21:./.:.:.:.:.:.
chr17	40103096	HG2_10X_SVrefine210Xhap12_11594	C	CTAATTTTTCTTTTCTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCCCCCACGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCTGAGTAGTGGGGACTACAGGCGCCCGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCCCCGCGTTGGTCAGGCTGGTCTCCAACTCCCGACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCCGGGTGTGCATTTTCCAAATTAATATTTTAATAATAAGCGCAGGCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGAGCGGATCACAAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACACTGTCTCTACTAAAAAAAAAGAAAAAAAATACAAAAGTTAGCCAGGCATGGTGGCGTGCACCTGTAATCCCAGCTACACAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGAAGGTTGAAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGTGACGCAGCAAGACTCTGTCTCAAAAAAATAAATAAATAAAAAATAAGCACAGGCCAGGTGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGACCTCCTGAGGTCCGGAATTCAGACCAGCCTGGCCAACGTGGGGAAACCCCGTCCCTATTAAAAATGCAAAATTAGCCAGGCGTGGTGGCACACTCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAAGAGAATCACTTGAATCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATGGCGCCACTGCACTCTAGCCTGGGCAACAAGAGCGAAACTCTGTCTCAAAGAAAAAATAAAATAAAATAAAATAAAATAAAAATAAAATGGCTGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGATCGCCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCCGTTTCTACTAAAAATACAAAATTGGCCAGGTGTGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCAGAGATCTTGCCATTGCACTCCAGACTGGGCAACAAGAGCAAAACTCCATCTCAAAAAAATAAATAAATAAAAATAAAAATAAAAAATATTAATTTGGAAAATACAGAAAAATAGAGAAAAGTATTCAGTCTCACCACCCAAAGACAAGTACTAATTCTAATCCTACTCTTTTATTGATACTGTGTTTTTTCATTCCAATCTTTTTTGTTTTGATTTTTCTCTCATATATTCTTAGTAATTTTTTTCTTTCTTTCCTTTTTTTTTTTTTTGAGACAGGGTCTCACTTTGTCACCCAGGTGGGAGTGCAGTGGCACGATTATAGCTCACTGCAATTTCAACCTCTCAGGCTTAAGCGATCCCCCTACCTTAGCCTCCCAAGTAGCTGGGCTACAGGCGCACACCACTGTGCCTGGCTAAATTTTGTATTTTTTTGTAGAGATGGGGTTTTGCCATGTTGCCCAGGCTTGAACTCCTTGGCTCAAGCAATCCACCCACGTTGGCTTCCCAAAGGCTGGGGTTACAGGAATGAGCCACCATACTTGGTAATAATATTCTTAAACATTATTTATGTTGTGTGTATGTGTGTGTGTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCATAATCTTGGCTCACTGCAACCTTCACCTCCCGGGTTCAAGTGATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGACTACAGGCGCCTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGACAGACAGGGTTTTGCCAGCTTGTCTAGGCTGATCTCGAACTCCTGACCTCAGGTGATCTGCCCACTTCAGCCTCCCAAAGCGCTAGAGACATGAGCCACCACGCCAGCCTCAACTGTTGTATTAAATTCCACATTCCATAGGTGTTACCAAAATAGTCTCAGTAGTCTTAAAATATCTTTATGCTTATGAACTCCACCCTTGTATCCAAAAGAACTGGTAGCTGGAGAACAAGTTTTATTCCGCCACCCAGCAGGAAGCCTTGGCATCCTGTGGCCCAGTGCATGGTTTTGGGGGATGAAGCTGACTCTGGTTCTTCATGTCCCCAGGTGGGAAGAAAAGATCCCTCTGGCAAAAACCACCCTGGAGAAGACCTGGCTGTTCCACGAGATCGGCCGCTGCTACTTGGAGCTGGACCAGGCCTGGCAGGCCCAGAATTATGGCGAGAAGTCCCAGCAGTGTGCCGAGGAGGAAGGGGACATTGAGTGGCAACTGAATGCCAGTGTTCTGGTGGCCCAGGCACAAGGTATGGGCTCAGAGATGACCACCCTACCTTTTCCAGCCTTCAGGCCCAGCTCACACCAGGGCTAGGAGTCTTGTGGACTGAGTTTACCATCCCAGTGTTTCTCCTTCCCAGATTATTCTGAGAGTGGGGATAAGCCACTCTATTTTGACCAGCACGTGGTAAGTGCTTTCATTAAGCAAAGCTTGGTTAGAGCTTGGGGTACCTTGAGCCTACCTCTGCCCTTGAGGAGGTCAGCTGCAGACCCACACAGCATCGTGTCATCCTCACAACAGTGCCCATGTATTGAGCCACTTTCCTTCTGCCTTGGTACTTTTTTTTTGTTTTGTTTCATTTTGTTTTTGAGACAGAGTTTCGCTTTTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCATTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTTCTGCTTCAGGCTCCCAAGTAGCTGGGATTACAGGCGTCTGCCACCACACCTGGCTAATTTTTTGTGTTTTTAGTAGAGACAGGGTTTCACCATGTTGGCTAGGCTGGTCTCAAATTCCTGACCTCAGGTGATCCAAACGCCTTGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACCATGCCCGGCCCTGTTTTGTTTTTTGAGACGAAGTCTCACTATGTTACCCAGGCTAGACTGCAGGGGCACGATCTCAGCTCACTGCAACCTTGGCCTCCCGGGTTCAAGCGATTCTCCTGCTTCAGCCTCCAGGGTAGCTGGGATTACAGGCGCGCACCACCACACCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCACGTTGGCCAGGCTGTTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCTTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACACCCAGCCAGCATTCTTGTATTGAATCATTATGATGTAGGTAGGCATTATCATCCTTATTTTAGAGATAGGGAAACTGAGGCACAGAGAGGTCCAGTAGACTCCCCAAGTCCTATGAGGGAAGCTTTTTTTTTTTTTTTGAGATGGAGACTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCATGGGTTCAAATGATTCCTGTGCCTCAGCTTCCTGAGTAGCTGGGATTACATGTGTGCACCATAATACCCAGCTATGTCTTTGTATTTTTAGAGACGCAGTTTCACTATGTTGGCTGGTTTCAAACTCCTGGCCTCAAGTGATCCACCCACCTCAGCCTACCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCCTGGCCGAGGAAACCTTTTATTTTTTAATTTATTTTATTTCTTTATTTTTATTTTTTGAGATGGAGTCTTGCTGTGTCACCCAGGCTGGAGTGTAGTGACACAATCTCGGCTCACTGCAACCTCTGTCTCCTGGGTTCAAGCGATTCTGCTGTCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGTGTGCCACCACTCCTGGCTAATTTTTTTGTATTTTTGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTTCTGACCTCAAGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGCACCCGGCCTCCAAGGGAACCTTTCAGAGTGATGGAAATGTTCTAAAATGGGATTGTGGTGGCCACTGTACAACTCTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4794:HG4_PB_pbsv_16683:HG2_PB_PB10Xdip_13237:HG2_PB_assemblyticsfalcon_10702:HG3_PB_SVrefine2PBcRDovetail_8095:HG3_Ill_SVrefine2DISCOVARDovetail_11939:HG2_PB_SVrefine2PBcRplusDovetail_4396:HG2_PB_SVrefine2PB10Xhap12_12166:HG2_10X_SVrefine210Xhap12_11594:HG4_PB_SVrefine2PBcRDovetail_8368:HG4_Ill_SVrefine2DISCOVARDovetail_11705:HG4_PB_SVrefine2Falcon1Dovetail_10374:HG3_PB_SVrefine2Falcon1Dovetail_10347;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11594:HG2_PB_SVrefine2PB10Xhap12_12166:HG2_PB_SVrefine2PBcRplusDovetail_4396;NumExactMatchSVs=3;ClusterMaxShiftDist=0.189723;ClusterMaxSizeDiff=0.189723;ClusterMaxEditDist=0.230926;PBcalls=10;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=4237;DistBack=2394;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=303;REFWIDENED=17:40103097-40103399;PctSeqSimilarity=0.9967;PctSizeSimilarity=1;PctRecOverlap=0.9528;SizeDiff=0;StartDistance=-200;EndDistance=-200;GTMatch=0;TruScore=98;MatchId=2225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:1/1:0:15:1:28:./.:0:4:0:0:1/1:0:16:1/1:0:635:.:4307:.
chr17	40258653	HG2_Ill_GATKHCSBGrefine_10998	T	TAAAAATACAAAAAAATAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_16763:HG3_PB_pbsv_16419:HG3_PB_SVrefine2PBcRDovetail_8096:HG2_PB_HySA_30514:HG3_Ill_SVrefine2DISCOVARDovetail_11941:HG3_Ill_MetaSV_2108:HG3_Ill_GATKHCSBGrefine_10941:HG2_Ill_GATKHCSBGrefine_10998;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10998:HG3_Ill_GATKHCSBGrefine_10941:HG3_Ill_MetaSV_2108:HG3_Ill_SVrefine2DISCOVARDovetail_11941;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0458716;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.154545;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=108;DistBack=49121;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=17:40258654-40258669;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2226.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:27:0|1:45:0:0:27:0|1:14:0:1:17:0/1:27:12:./.:.:.:.:.:.
chr17	41125239	HG3_Ill_GATKHCSBGrefine_10946	G	GCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCTACCCCGTCCGGGACGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGGCCCGGCCAGCTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10377:HG2_PB_pbsv_16768:HG4_Ill_GATKHCSBGrefine_11368:HG4_PB_pbsv_16688:HG3_Ill_GATKHCSBGrefine_10946:HG3_PB_pbsv_16423:HG2_Ill_GATKHCSBGrefine_11003:HG2_PB_PB10Xdip_13240:HG3_Ill_MetaSV_2111:HG2_PB_SVrefine2Falcon1plusDovetail_4797:HG3_PB_SVrefine2Falcon1Dovetail_10351:HG2_PB_SVrefine2PBcRplusDovetail_4400:HG2_PB_SVrefine2PB10Xhap12_12170:HG4_PB_SVrefine2PBcRDovetail_8371:HG3_PB_SVrefine2PBcRDovetail_8099;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11003:HG3_Ill_GATKHCSBGrefine_10946:HG4_Ill_GATKHCSBGrefine_11368;NumExactMatchSVs=3;ClusterMaxShiftDist=0.242661;ClusterMaxSizeDiff=0.238748;ClusterMaxEditDist=0.375734;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=274;DistBack=-196;DistForward=63;DistMin=-196;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=253;REFWIDENED=17:41125183-41125435;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:47:1/1:0:6:3:26:./.:0:1:0:0:1/1:0:20:./.:.:.:.:.:.
chr17	41486978	HG3_PB_pbsv_16429	A	ACAGTACCTGCCAATACCACACCTCTAGAAACATCTGCTGTTAACGAAAAACTAGGCTTCGCCTCTCCCTTCGCTCTCCCCTCCCTCTCCCCTCTCCCCTCTCCCCTCTTCTCTCCCCTCCTACCCTCTCCCTCTCCCTCACGGTCTCCGTCCCTCTCTTTCCACGTCTCCCTCTGCATGCCTGAAGCCGAAGGCTGACTGTACTGCTGCCATCTCGGCTCACTCCAACCTCCGCTGCCTAATTCTCGCTGCCTCAGCCTCGAGTGCCCTGCGATGGCAGGCCCCGCGCCGCCAGCCTGACGGTTTTCAATAATTTGTTTGGTGGAGACGCGGTTTCGCGTGTTGGCTCAGGCTGGTCTCCAGCTCCCTAACCGCGAGCTGATCCGCCAAGCCTGGGCCTCCGAGGTGCCGGGATCGCAGGACCCGGAGTTCTGTTCACTCAGGCTCAATGGTGCCCAGGCTTGGAGGCAGTGGCGTGATCTCGGCTCGCTACAGACCCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTACGAGATTGCAGGCCTTGCCCGGCCACCACCCCATCTGGAAGTGAGGAGCGTCTCTGCCTGCCCCCATGTCGTCTGGGACGTGAGGACCCTCTGCCCTGGCTGCCCGCATCCCCTGGAAAGTGAGGGAGCGTCTCTGCCCAGCGCCATCCCATCTAGAAGTGAGGATCGCCCTTCCCGGCCGCCATCCCATCTAGGAATGGAGCTGACGCGTCTCTGCCCGCCTCCCATCGTCGAGATGTGGGGATGCGCTCCTCTGCCTGCCGCCCCGCTGGATGTGAGAGGCGCTCTACCCGGCTCGACCCCGTCCGGGAGGTCGAGGAGCGTCTCTGCCCGCCGCCCCGTCTGAGAAGATACCCCTCGCTCGCAACCGCCCGCTGAGAAGTGAGGAGCCCCTCCGCCCGCAGAACACCCCGTCTGTGCAAAGTTGAGGAGCGTGCCTGCCCGGCAAAGCCGCCCGTCCCGGGAGGTGAGGGCCGTCCTCTGCCCCGCCCACCCTACTGGGAAGTGAGGAGCCATCCTGCCCGCCAGCCCGCCCCCCGCCGGGAGGGGGTTGGGGGGGGTCACCCCCCGCCCCGCAGCGCCCCATCCGGAGGTGGAGGGCGCCTCTGCCCGCCGCCCTACTGGGGAAGTGGGAGCCCCCTCTCCCGTGCCCAGCCGCCCGCCTGGAGGGAGGTGGGGGTCAGCCCCCCGCCCGGCTTGGTGTTTCCCTCTGACCACCAAGACCGTCCGGGAAGGTGAGGTGGCGGGTCACCCCCGCCCAGCACCGACCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGCCCGCCCTAACTGGGAACGTGAGGAACCCCCTGCCCAGCCCAGCCGCTCGTCGGGAATGAGGTGGCGGTCAGCCCCCCGCCCGCCCAGCCGCCCCATCTGGGAGCGGAGGTGGGGGGATTCACCCCCCGCCGGCCAGCAGCCCCATCCGGGAGGGAAGGGGGGCGGGGTCAGCCCCCGCCCGGCGTTAGCCCAACCCTCCGGGAGTGAGGGCGCCCTCTCCCGGCCGCCCCTACTGGAAGTGAGGAGCCCTCGCTGCCAGCCAGCTCCTCAATCCGGGAAGGAGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCATCCGCGAGGGACGTGGGGGGGTCAGCCCCGCCCGGCCAGTCCCCCGTCCGGGAGGGAGGTGGGGGACAAGCCCCCCGCCTGGCCAGCCGAACCCGTCCGGCGAGGTGAGGGCGCCTCTGCCCAGCCGCCCGCTACGGAAAGTGAGAGCCCGTTCCGCACCACCCCGTCTGGGCGGTGTACCCAAGCAGCTCATTGAGAACGGGCCATGATGAAACGGTGGTTCGTGCGAGTAGAAAGGGGGAAAGGTGGGAAAAGATGAGCAAACGGAATTGGTTTGCTCGATGTCCTTGTGTAGAGGAGAGGTAGACATGGGATGACTTCATTGCTTCTGTACTAAGAAAACTTTCTTATCCTGTGATCATGTGACCTTACCGCCCACCCTGGCTCTCCTGAATACATGTGCTGGTGTCCACCAGGGTAAGGATTTAAGGCGGTGCAAGATGTGCATTTGAAACAGATGCTTGAAAGGCAGCATGCTCCGTTAAGAGTCCATCACCACTCCCTAATCCTCAAGTACGCCCACAGGGAACAAACACTGCCGAGGCCGCAGGGTCCTCTGCCTAGAAAACCAGAGACCCTTTGTTCACTTGTTTATCTGCTGACCTTCCCCCACTATTGGTCCTATGACCCTGATGCCAAATCCCCCTCTCGAGAAAACACTCACAGAATGAACAATAAAATAATAAAAAAAAGAAATTTCAGGCCAGTTGCATGCGCCTTCATGCCTGTAATGCCCACGCACTTTGGAAGACTGAGGTGGGCGATCACTGAGGTCGGAGTTACGAGAACCAGCCTGGCCAACATGGGTGAAAACCTGGTCTTTACTAAAAAATACAAAAAAAACTGGCTGAGTTCATGCGCGCACACCTTATATTCCCAGCACTCAGGAAGGCCTGAAAGCACGGAGAATTTGCTTTGAAGCTGGGAGGTGAGGTTGCAGTGAAGCTAAGATCACCCCACCTGCACATGCTCCAGCCTGGGTGACAGAGGAGGTTCCACTCTAAATAAATTAAATAAATTAAATACTACAACAACAAAAACAAAAAGAAAAAAAAAAAAAAAAAAAAAAACAAAAAAGATGGCTATCTT	20	PASS	ClusterIDs=HG3_PB_HySA_25282:HG3_PB_pbsv_16429:HG4_PB_assemblyticsfalcon_10503:HG2_Ill_breakscan11_4727:HG4_PB_SVrefine2Falcon1Dovetail_10380:HG2_PB_SVrefine2Falcon2Bionano_8246:HG4_PB_HySA_24422;NumClusterSVs=7;ExactMatchIDs=HG3_PB_pbsv_16429;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0333272;ClusterMaxSizeDiff=0.0333272;ClusterMaxEditDist=0.144047;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=2739;DistBack=9;DistForward=23;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=17:41486979-41486978;PctSeqSimilarity=0.9357;PctSizeSimilarity=0.9869;PctRecOverlap=0.9869;SizeDiff=36;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=96;MatchId=2229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:51:31:1|0:2:18:48:0:1|0:0:9:25:0:0/0:22:1:0/1:70:42:.:2751:.
chr17	41491017	HG2_PB_HySA_30534	T	TCTGTAATCCCAGCACTTTGGGAGGCCGAAGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATCAGAATGATGGAAAAGAGAGAGAGAAATAAGGCAATCAGCTCTCCACTGACATATGATTTTTTTTTTTTTTTTTTTAGAGACAGGGTCTTGGTCTGTCACCCAGGCTGGTGTGCTGGGTTGTGATCATAGCTCACTGCAGCCTCAACCTCTTGGGCTCAAGCTATCCTCCCACCTCAGCCTCCTGAATAGCTAGGACTACAAGCATGTACCACCATGCCTGGCTAATTTTTATATTTTTTGTAGAGATGGGATCTTGCTATATCACCCAGGCTGGTCTTGAACTTCTGGCCTCAAGTGATCCTCCTGTCTTGGCCTCCCAAAACGCTGGGATTAGAGGCATGAGCCATCATGCCCCCAGCCCCTGACATACTTTTTTTTTTTGAGATGGAGTCTCAATCTGTCACCCAGGCTGGAGTGCGGTGGCACCATCTCAGTTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAATTCCTCTGCCTCAGCCTCCCGAGTGGCTGGGAGTACAGGCGTGCATCTCCACTCCTGGCTACTTTTTGTATTTTTAGGAGAGACAGGGTTCTGCCATGTTGGCCAAGCTGGTCTCGAACTCCTGACAGGTGATCTACCCACCTTGGCCTCCCAAAATGCTGGGATTATAGGCATGAGCCACTGCGCCTGGCCTGACATACTATTTTAATGAGAAGAATCACTTGAACCGGGGAGACGGAGGTTGCAGTGAGCCAAGATCGCCCCACTGCACTCCAGCTTGGGCGACAGAGCGAGACTCTGTCTCAAACAAACAAACACAACCACTAGGGAACATTTAGTCCAATGGCTTTCAAATTCTTTAAAAAAGTAACAGGACCAGGGGCTGTGGCTCACGCC	20	PASS	ClusterIDs=HG3_PB_HySA_25283:HG3_PB_SVrefine2PBcRDovetail_8101:HG4_PB_SVrefine2Falcon1Dovetail_10381:HG3_PB_assemblyticsfalcon_10696:HG4_PB_assemblyticsfalcon_10504:HG2_PB_PB10Xdip_13243:HG2_PB_pbsv_16771:HG3_PB_pbsv_16430:HG2_PB_HySA_30534:HG2_PB_SVrefine2PB10Xhap12_12174:HG2_10X_SVrefine210Xhap12_11610;NumClusterSVs=11;ExactMatchIDs=HG2_PB_HySA_30534;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0351031;ClusterMaxSizeDiff=0.0342255;ClusterMaxEditDist=0.182922;PBcalls=10;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1158;DistBack=4014;DistForward=25926;DistMin=4014;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=287;REFWIDENED=17:41491005-41491291;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9965;PctRecOverlap=0.9871;SizeDiff=4;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=99;MatchId=2230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:49:0|1:23:0:1:45:./.:17:0:2:11:0/1:26:13:0/1:30:100:.:2751:.
chr17	42206568	HG2_10X_SVrefine210Xhap12_11613	C	CTGTCACCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCTCTACATACCAGGTTTAAGTGATCCTTGTGCCTCCACCACCAGAATAGCTGGGATTACAGGCATGTACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAAAGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACTTCAGGTGATCCACCCACCTCAGCTTCCCAAAGTGCTGGGATTACAGGGGTGAGCCACCACGCCCCGCTTTAAACTATAATGAAATTGGCTGGGTGAGGTGGCTCATGCCTGTAATCCCAGCATTTTGGGAGGCCGAGGCAGGTGGATTACCTGAGGTCAGGAGTTGGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTGTACTAAAATACAAAAATTAGCTGGGCATGGTGGCGCGCATCTGTAATCCCAGCTACTCAGGAGGCTGAGGAAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGAACATGCCATTGCACTCCAGTCTGAGCAATAGAGTGAAACTCAGTCTTAAAAAAAAACCATAATGAAGCTTTGCACT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10385:HG4_PB_pbsv_16696:HG3_PB_pbsv_16436:HG3_Ill_Spiral_17134:HG2_PB_pbsv_16776:HG2_PB_HySA_30541:HG4_Ill_MetaSV_2041:HG3_Ill_MetaSV_2114:HG2_Ill_MetaSV_1976:HG2_Ill_GATKHCSBGrefine_11010:HG4_PB_HySA_24427:HG3_PB_HySA_25285:HG2_PB_PB10Xdip_13248:HG3_PB_SVrefine2Falcon1Dovetail_10358:HG3_Ill_SVrefine2DISCOVARDovetail_11951:HG4_PB_SVrefine2PBcRDovetail_8375:HG3_PB_SVrefine2PBcRDovetail_8105:HG4_Ill_SVrefine2DISCOVARDovetail_11715:HG2_PB_SVrefine2PBcRplusDovetail_4407:HG2_PB_SVrefine2PB10Xhap12_12179:HG2_PB_SVrefine2Falcon2Bionano_8249:HG2_PB_SVrefine2Falcon1plusDovetail_4803:HG2_Ill_SVrefine2DISCOVARplusDovetail_5153:HG2_10X_SVrefine210Xhap12_11613;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11613:HG2_Ill_SVrefine2DISCOVARplusDovetail_5153:HG2_PB_SVrefine2Falcon1plusDovetail_4803:HG2_PB_SVrefine2Falcon2Bionano_8249:HG2_PB_SVrefine2PB10Xhap12_12179:HG2_PB_SVrefine2PBcRplusDovetail_4407:HG4_Ill_SVrefine2DISCOVARDovetail_11715;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0737705;ClusterMaxSizeDiff=0.0688525;ClusterMaxEditDist=0.190779;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=593;DistBack=1474;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=260;REFWIDENED=17:42206569-42206828;PctSeqSimilarity=0.9773;PctSizeSimilarity=0.9966;PctRecOverlap=0.6269;SizeDiff=-2;StartDistance=-221;EndDistance=-221;GTMatch=0;TruScore=86;MatchId=2231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:1:30:2:15:./.:0:3:1:7:1/1:0:15:1/1:3:56:.:.:.
chr17	42409504	HG3_Ill_SVrefine2DISCOVARDovetail_11952	C	CCCAGGCTGGAGTGCAGTGGTACGATCTTGGCTCACTGTAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCACCATCACGCCTGTCTAATTTTTGTATTTTTAGTAGAGACAGCGTTTCGCCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCTCACCTGGGCCTCCCAAAGTGCTAGGATTACAGGCATGAGCCACTGTGCCCAGCCTCATTCACCATTTCAAAATATCAGGTCCTGTCCCTGGTTGGTTGTCTAGTGGTTAGGAAAAGAGGGCCCGGCACGGTGGCTCACGCCTGTAATCTCAGCACTGTGGGAGGCCGAGGTGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGAGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAAGCAGGAGATTGGTGTGAACCCAGGAGGCAGAGCTTGCAGTGAGCAGAGATCGCACCACTGCATTCCAGCCTGGGCAGGCAACAGAGCAAGACTCTGTCTCAAAAAAAAAAAGAAGAAGAAAGAAAAGAAGAGAAAAGAAAAAAGGAAGGAAGGAGAAAGAAGAAAGAAAGAAAGAGAAAAGAAAGAAGAAAGAAAAAGAGAAAGAAAGAAAGAAAGAAAAGAGATGGAAAGAAAAAATGGAAGCAAGAAAGAGAATGAAGGAAATAAAATAAAAGGCAAAGTGTTGTGGTATGTGGTGATTACAAATACGGGATCAGGGCCAGACCTGGATTCATTTCAGCTGTGTGACCTCAGGTCACACAGGTTGCCTAATTTCCCTTAACGGCTTTTTTTTTTTTTTTTTTTTTTGGTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8377:HG4_PB_pbsv_16699:HG2_PB_HySA_30542:HG3_PB_HySA_25286:HG3_PB_pbsv_16439:HG2_PB_pbsv_16779:HG4_PB_HySA_24429:HG3_Ill_MetaSV_2115:HG2_Ill_MetaSV_1977:HG4_Ill_MetaSV_2042:HG4_Ill_GATKHCSBGrefine_11374:HG2_PB_PB10Xdip_13409:HG4_PB_SVrefine2Falcon1Dovetail_10387:HG3_PB_SVrefine2Falcon1Dovetail_10360:HG2_PB_SVrefine2Falcon1plusDovetail_4805:HG4_Ill_SVrefine2DISCOVARDovetail_11717:HG3_Ill_SVrefine2DISCOVARDovetail_11952:HG2_PB_SVrefine2PBcRplusDovetail_4409:HG2_PB_SVrefine2PB10Xhap12_12181:HG2_PB_SVrefine2Falcon2Bionano_8251:HG2_Ill_SVrefine2DISCOVARplusDovetail_5155:HG2_10X_SVrefine210Xhap12_11614:HG3_PB_SVrefine2PBcRDovetail_8106;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11614:HG2_Ill_SVrefine2DISCOVARplusDovetail_5155:HG2_PB_SVrefine2Falcon2Bionano_8251:HG2_PB_SVrefine2PB10Xhap12_12181:HG2_PB_SVrefine2PBcRplusDovetail_4409:HG3_Ill_SVrefine2DISCOVARDovetail_11952:HG4_Ill_SVrefine2DISCOVARDovetail_11717;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0532198;ClusterMaxSizeDiff=0.0478978;ClusterMaxEditDist=0.247499;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=920;DistBack=1380;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=229;REFWIDENED=17:42409505-42409733;PctSeqSimilarity=0.9949;PctSizeSimilarity=0.9989;PctRecOverlap=0.937;SizeDiff=-1;StartDistance=-58;EndDistance=-58;GTMatch=0;TruScore=97;MatchId=2232.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:22:0:10:./.:0:1:0:3:1/1:0:21:0/1:16:136:.:.:.
chr17	45209067	HG2_10X_SVrefine210Xhap12_11631	T	TTCTGTTGCCCAGGCTGGAGTGCAGTATCACCTTCTTAGCTCACAGCAGCCTTGCACTCCTGGGCTCAAGTGATCCTTGTGCTTCAGCCTCCCAAGTAGCCAGGACCACAGGTGTGCACCACCATGCCAGGCTAATTTTTAAATTTTTTTGTAGAGATTGGGTCTCGCTATGTTGCCCAGGCTGGTCTTGAACTCCTGGCCTCAAGCAATCCTCCTGCCTTGGCATCCCAAAGTGTTGGGATTACAAGTATGAGCCACCGTACCCGGCCAAAGTACAATTTGTTACCAGATACATTTAAAATATATAAATATAAAAATGATTGTGCATATTGACTTATAAGAATTTTAATTCATTATGACATACCTATGTTACTCAGAGGCTTAAACACAGGGAACCATTTGCCTTAAAATACTACCTACTTAAGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCGGATCATGAGGTCAGGAGATCCAGACTATCCTGGCTAACACGGTGAAACACAGTCTCTACTAAAAATACAAAAAATCAGCCAGGTGTGGTGGTGGGCACCTGTAGTCCCAGCTACTCGGGATGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCGGGCCACTGCACTCCAGCCTGGGTGACAGGTCTCAAAACAAACAAACAAACAAACAAACAAAAAACAAAAAAAAAACCTACTTAACTTAGGAGCTAAATATTAACCCATGGAAAATGCTTTCAAAAATAGGAAGTATCTTTTTTTTTTTTTGAGACAGAGTCTTGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8121:HG4_PB_pbsv_16712:HG3_PB_pbsv_16465:HG2_PB_pbsv_16808:HG4_PB_HySA_24440:HG4_Ill_GATKHCSBGrefine_11382:HG3_Ill_GATKHCSBGrefine_10974:HG2_Ill_MetaSV_1985:HG2_Ill_GATKHCSBGrefine_11036:HG3_Ill_MetaSV_2124:HG4_PB_SVrefine2Falcon1Dovetail_10395:HG3_PB_HySA_25298:HG2_PB_PB10Xdip_13450:HG2_PB_HySA_30561:HG3_Ill_Spiral_17164:HG4_Ill_Spiral_1304:HG2_Ill_Spiral_1094:HG3_Ill_SVrefine2DISCOVARDovetail_11966:HG2_PB_SVrefine2PBcRplusDovetail_4422:HG2_PB_SVrefine2PB10Xhap12_12200:HG2_PB_SVrefine2Falcon2Bionano_8258:HG2_Ill_SVrefine2DISCOVARplusDovetail_5169:HG2_10X_SVrefine210Xhap12_11631;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11631:HG2_Ill_SVrefine2DISCOVARplusDovetail_5169:HG2_PB_SVrefine2Falcon2Bionano_8258:HG2_PB_SVrefine2PB10Xhap12_12200:HG2_PB_SVrefine2PBcRplusDovetail_4422:HG3_Ill_SVrefine2DISCOVARDovetail_11966;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0688019;ClusterMaxSizeDiff=0.0664294;ClusterMaxEditDist=0.205814;PBcalls=12;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=825;DistBack=15397;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=258;REFWIDENED=17:45209068-45209325;PctSeqSimilarity=0.9745;PctSizeSimilarity=0.9988;PctRecOverlap=0.7867;SizeDiff=1;StartDistance=-176;EndDistance=-176;GTMatch=0;TruScore=91;MatchId=2234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:82:1/1:0:36:0:14:./.:0:5:0:8:1/1:0:22:1/1:7:128:.:.:.
chr17	46166909	HG2_PB_SVrefine2PB10Xhap12_12201	A	AGCACGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTTGGGAGTTCAGGACCAGCCTGACCAACATGGAGAAATCTCGTCTCTACCAAAAACACAAAATTAGCCGGGCGTGGTAGCACATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGATAATCGCTTGAACCTGGGAGGCAGAGGTTGCGGTGAGCCGAGATCGTGCCATTGCACTCCAGCCTGGGCAACAAGAGTAAAACTCTGTTTCAAAAAGAAAAAAAAATCAGTTCTCATAGTTCGCTAGAATGCCGGTGAACATTTTATTTTCTCCATCACATTTAGAATAACGATGAAGCAGTAAGGGAAGTAACAACTGATGTGCTTGAAAACAAAACCTCCTCTATATCACATTCAACACCATCCAGTCTAGACCTTTGTTGTACAGCAATGAAACTGGAAGGGCACTGCTTAAAAGATCCTCAGCATCCCTTTCACCAGAAGAAAGGTAACAGGAGCACCAGAAGCATGATTAGGGTTCCTATGTGGTCTGCTTCTCAGTGAAAGACCTGTTTAATCAAACACCAGGACAATAAGCAAAGCACAACTGTCACGATTCCAAGCCTTGGCCCCTAATATCTTTCACTTCTCTGACCTCTCAACTTTATGTTTATAGGTAGTCACGTATAGTTACTATATAACTCAGTTTCTTCATCTGTAAAACAGACTTAATGACCCTCATGCGATAACTGAGAGGTTAGCTTTTTTTCTTTTTTTTTTTGAGACAGAGTCTCGCTTTGTCGCCCAGGATGGAGTGCAGTGGCGCGATCTCAGCTCACTGTAAGCTCCGCCTCCCGGGTTCACGCCATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCAGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACTGTGTTAGCCAGGATGCTCTCAATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGAATTATAGGCGTGAGCCACCATGCCCGGCCCTGAGAGGTTAGCTTTTATGACTCCTGGCATTAATTATCTATTTATATATTTGCACATACACTCTACTTCTTCATTATACACTACTAGAGCAGTATATATTCAGAGATAGCTCTCTGAAACCCAGTGCACTGAGAAAAGTCAATGAGAAAACAACATTTTTGTCCTACAGATCTGGCTGAAATTCATGACTTGGTTTCTCCAAACAGCAGAGCAGTTCCAGAAAACACTCAAGAAGAACCCAGATATGGCTACTATGAATGAACCAAGAACTACAAAACAGAGAAACCAAGACCTTATTTCTGGAGGACTGAGACAGAAGAGCTGCCAGAAACAGAAATCACATTGCATATACCGGAAGTGCAGGAATTTCTTTTGCTTTTCCATTTATCTAGCCCAGGGAGGAGAATAAAGTTACAAAGTTTGTGTAATAAACGGCAAAAGGAGGCCGG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5172:HG4_PB_pbsv_16716:HG3_PB_pbsv_16469:HG4_PB_SVrefine2Falcon1Dovetail_10398:HG4_Ill_Spiral_1305:HG2_PB_pbsv_16809:HG2_PB_PB10Xdip_13451:HG2_PB_HySA_30574:HG4_Ill_SVrefine2DISCOVARDovetail_11727:HG2_PB_SVrefine2PBcRplusDovetail_4423:HG2_PB_SVrefine2PB10Xhap12_12201:HG2_PB_SVrefine2Falcon2Bionano_8259:HG2_Ill_GATKHCSBGrefine_11037:HG2_10X_SVrefine210Xhap12_11635:HG4_PB_SVrefine2PBcRDovetail_8386:HG4_PB_SVrefine2Falcon1Dovetail_10397:HG4_Ill_GATKHCSBGrefine_11384;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11635:HG2_Ill_GATKHCSBGrefine_11037:HG2_PB_SVrefine2Falcon2Bionano_8259:HG2_PB_SVrefine2PB10Xhap12_12201:HG2_PB_SVrefine2PBcRplusDovetail_4423;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0471881;ClusterMaxSizeDiff=0.0465417;ClusterMaxEditDist=0.210492;PBcalls=11;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=1513;DistBack=14;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=280;REFWIDENED=17:46166910-46167189;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2235.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:1/1:2:24:0:18:1/1:0:11:0:12:1/1:0:43:./.:22:246:.:1569:.
chr17	46504989	HG2_Ill_GATKHCSBGrefine_11039	T	TAAAAGCACACACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4729:HG2_PB_pbsv_16812:HG2_PB_SVrefine2Falcon1plusDovetail_4822:HG2_PB_HySA_30577:HG3_PB_pbsv_16471:HG3_PB_HySA_25309:HG3_Ill_GATKHCSBGrefine_10979:HG2_Ill_MetaSV_1986:HG2_Ill_GATKHCSBGrefine_11039:HG4_PB_SVrefine2Falcon1Dovetail_10399:HG3_PB_SVrefine2Falcon1Dovetail_10375:HG4_PB_HySA_24444:HG4_PB_pbsv_16718;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11039:HG2_Ill_MetaSV_1986:HG3_Ill_GATKHCSBGrefine_10979;NumExactMatchSVs=3;ClusterMaxShiftDist=0.195956;ClusterMaxSizeDiff=0.195956;ClusterMaxEditDist=0.310912;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=308;DistBack=14089;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=17:46504990-46505002;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:33:0|1:29:6:2:12:./.:24:0:0:4:0/1:27:18:0/1:11:29:.:.:.
chr17	46617220	HG3_PB_SVrefine2Falcon1Dovetail_10376	A	GGACGGATCACTTGAGGTCAGGAGTTCGAGGCCAGCCTGGCCAACATGGTGAAACCTCATCTTTACTAAAAATATAAAAATTAGCCAGGCGTGGTGGCAGGTACCTGAGGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATCACTTGAACCCAGAAGGTGGAGGTTG	20	PASS	ClusterIDs=HG4_PB_pbsv_16719:HG3_PB_pbsv_16472:HG3_PB_SVrefine2PBcRDovetail_8123:HG3_PB_SVrefine2Falcon1Dovetail_10376:HG3_Ill_SVrefine2DISCOVARDovetail_11970:HG2_PB_SVrefine2PB10Xhap12_12203:HG4_PB_SVrefine2Falcon1Dovetail_10400:HG2_PB_PB10Xdip_13453:HG2_Ill_breakscan11_4730:HG2_PB_SVrefine2PBcRplusDovetail_4425:HG2_PB_SVrefine2Falcon2Bionano_8260:HG2_Ill_SVrefine2DISCOVARplusDovetail_5173:HG2_10X_SVrefine210Xhap12_11637:HG2_PB_SVrefine2Falcon1plusDovetail_4823:HG3_PB_HySA_25310:HG2_PB_HySA_30578:HG2_PB_pbsv_16813;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12203:HG3_Ill_SVrefine2DISCOVARDovetail_11970:HG3_PB_SVrefine2Falcon1Dovetail_10376:HG3_PB_SVrefine2PBcRDovetail_8123;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0529412;ClusterMaxSizeDiff=0.0470588;ClusterMaxEditDist=0.185507;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=168;DistBack=-1;DistForward=17888;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:46617221-46617219;PctSeqSimilarity=0.994;PctSizeSimilarity=0.9881;PctRecOverlap=0.9882;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:1:19:0:24:1/1:1:32:0:34:1/1:0:28:./.:.:.:.:.:.
chr17	46935333	HG2_PB_pbsv_16814	C	CTCACAATCAATAGAATAGATTATAGAATAGAGATAGATAGAATCGATAAGAAATAGAATAGCGAATAGAATAGAATAGAATAGAATGAATAGATAGAATAGATAGAAATGAATGAATAGAATAGAATATGAATAAGAATAGAATAGAATAAGAATAGAATAGATAGAATAGAATAGAATAGAATAGAATAGAATAGAATGAAATATAGATATAGAATCAGAATAGAATGAATAGAATAGAAGTAGAATGAATAGAATAGAATAGAATAAGAACTAGTAATAGAATAGACATAGAATAGAATAGATAGAAATAGAATAGAATAGAATAGAATATCGAATATGAATAGAATAGAATAGACTAGAATATGAATAGAATAG	10	PASS	ClusterIDs=HG2_PB_pbsv_16814:HG4_PB_SVrefine2Falcon1Dovetail_10401:HG4_PB_pbsv_16720:HG2_PB_SVrefine2Falcon1plusDovetail_4824:HG4_PB_SVrefine2PBcRDovetail_8388:HG2_PB_SVrefine2PB10Xhap12_12204:HG4_PB_HySA_24454:HG2_PB_HySA_30582;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_16814;NumExactMatchSVs=1;ClusterMaxShiftDist=0.327718;ClusterMaxSizeDiff=0.327718;ClusterMaxEditDist=0.327718;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=377;DistBack=3576;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=104;REFWIDENED=17:46935327-46935430;PctSeqSimilarity=0.9444;PctSizeSimilarity=0.9363;PctRecOverlap=0.7692;SizeDiff=24;StartDistance=-75;EndDistance=-75;GTMatch=0;TruScore=88;MatchId=2239.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:25:1|0:6:20:19:4:0/0:15:1:32:0:0/1:27:6:0/1:16:3:.:.:.
chr17	47203041	HG3_PB_SVrefine2PBcRDovetail_8124	G	GGCCGCCCCGTCTGGGAGGGAGGTGGGTCGGCCCCCGCAGGGCCGGCCGCCCCGTCCCGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCGGCTCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCAGCTTCCCCTACTGGGAAGTGAGGAGCCCCTCTACCCGGCCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11638:HG4_Ill_MetaSV_2049:HG2_PB_PB10Xdip_13468:HG2_PB_pbsv_16817:HG4_PB_pbsv_16722:HG3_PB_HySA_25320:HG3_PB_pbsv_16474:HG2_PB_SVrefine2Falcon1plusDovetail_4826:HG3_PB_SVrefine2Falcon1Dovetail_10378:HG4_PB_SVrefine2Falcon1Dovetail_10403:HG3_PB_SVrefine2PBcRDovetail_8124:HG2_PB_SVrefine2PBcRplusDovetail_4427:HG2_PB_SVrefine2PB10Xhap12_12206:HG2_PB_SVrefine2Falcon2Bionano_8262;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11638:HG3_PB_SVrefine2PBcRDovetail_8124:HG2_PB_SVrefine2PBcRplusDovetail_4427:HG2_PB_SVrefine2PB10Xhap12_12206:HG2_PB_SVrefine2Falcon2Bionano_8262;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0803571;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.222222;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=220;DistBack=79;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=118;REFWIDENED=17:47203042-47203159;PctSeqSimilarity=0.9705;PctSizeSimilarity=0.9778;PctRecOverlap=0.5511;SizeDiff=-5;StartDistance=-99;EndDistance=-99;GTMatch=0;TruScore=83;MatchId=2240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:63:1/1:2:25:2:19:./.:1:10:0:5:1/1:0:12:./.:.:.:.:.:.
chr17	47470333	HG2_PB_SVrefine2Falcon1plusDovetail_4827	A	ACGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCTGGCCTTTTTTTTTTGAGATGGAGTCTTGCTCTATCACCAGGCTGGAGTGCAGTGGCGCAATCTTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACGTGCCACCATGCCCAGCTAATTTTTATATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCTATCTCTTGATTTCATGATCCGCCTGCCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10405:HG4_PB_pbsv_16725:HG2_PB_HySA_30592:HG4_PB_HySA_24465:HG2_PB_pbsv_16819:HG4_PB_HySA_24464:HG2_PB_SVrefine2Falcon2Bionano_8265:HG2_PB_SVrefine2Falcon1plusDovetail_4827:HG3_PB_SVrefine2Falcon1Dovetail_10380:HG2_Ill_breakscan11_4731;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4827:HG2_PB_SVrefine2Falcon2Bionano_8265;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0798611;ClusterMaxSizeDiff=0.0763889;ClusterMaxEditDist=0.168919;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=289;DistBack=182;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=367;REFWIDENED=17:47470334-47470700;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:19:0|1:27:0:0:17:1|0:0:9:12:0:./.:12:1:./.:.:.:.:.:.
chr17	48118475	HG2_Ill_SVrefine2DISCOVARplusDovetail_5185	G	GTTGTTTTTTGTTTTTGTTTTTTTTTTTTGAGATGGAGTTTCGCTCCTGTTGCCCAGGCTGGAGTGCAATGGCGCGATCTTGGCTAACCTCAACCTCCGCCTCCCTGCAACTTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTGGAGTAGCTGGGATTACAGGCATGCACCACCATGCCCAACTAATTTTGTATTTTTAGTAGAGACTGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCTGAGCTTTATTTCGTGTTCGTTGGCCGCATAAATGACTTCTTTTGAGAAGTGTCTGTTCATGTCCTTTGCCTACTTTTTAATTGGGTTGTTTTTTCCCTGTAAATTTGTTTAAGTTCCTTGTAGACTCTGGTATTAGACCTCTCTCCAATGGATAGGTTGCAAAAAAATTCTGTAGGTTCGCTCTGATGATAGTTTCTTTTGCTGTGCAGAGCTCTTGAGTTTAATTAGATCCCATTTGTCCATTTTTGCTTTTGTTGCAATTGCTTCTGATGTTTTCGTCATGAAATCTTCACCCGTGACTGTGTCCTGAATGGCATCGTCTAGATTTTCTTCTAGGGTTTTTATAGTTTTGGGTTTTACATTTAAGTCTTTAACCCATCTGGTTGGGCGCAGTGGCTCATGTCTATAATCTCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCGAGGCCAGCCTGGCCAAAATGGTGAAACCCCGTCTCTAGTAAAAATACAAAAATTAACTGGGTGTGGTGGCAGGCACCTGTAGTCCCAGCTACATGGGAGGCTGAAGCAGGAGAACCATTTGAACCCCAGAGGCAAAGATTGCAGTGAGCCAAGATCTTGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAGAAAAAGGAAAAAAGTCTTCAAAGCACCTTAAGTTAATTTTTTGTATAAGATGTAAGGAAGGGGTCCAGTTTCAATTTTCTGCATATGGCTAGCCAGTTCTCCCAGCACCATTTATTCAATAGGGAATCCTTCCTCATTGCTTGTTTTTGTCAGATTTGTTGAAGATCAGATGGTTGTAAACGTATGGTCTTATTTCTGAGTTCTCTATTCTGTTCCATTGGTCTATGTGTCTGTTTTTGTACCAGTACCATGCTGTTTTGGTTATTATAGCCTTGTAGTACAGTTTGAAGTCGAGTAGCATGTTACCTCCAGCTTTGTTGTTTTTGCTTAGGATTGTCTTGGCTATATGGACTCTTTTTTGGTTGCCTGTGAATTTTAAAATCATTTTTTCTAATTCTGTGAAGAATGTCAATGGTAGTTTGATGGGAATAGCATTGAATCTATAAATTACTTTGGTCAGTATGGCCATTTTCATGATATTCATTCTTCCTATCCATGAGCATGGAGTGTTTTTCCATTTGTTTGTGCCCTCTTTGATTTCCTTGAGTGAGCTTGGTGGCACAGACCTGTAGTCCCAGCTACTCAGGAGGCAGGAGAATCTCTTGAGCCTGGGAGTTGGAGGCTGCAGTGAGCTATGATCACACCATTGCGCTCCAGCATGGGCAACAGAGCGAGACCCTGTCTCAAAAAAATAAAGTATACAATTTAATATTTGTTTGTTTTTGTTTTGTTTTTGTTTTTGTTTTGTTTTTTGAGATGGAGTCTCACACTGTCACTCGGCTGGAATGCAGTGGCACGATATTAGCTCACTGCAACCTCTGCCTCCCAGATTCAAGTGGTTCTGATTCTCCTGCCTCAACCTCCCAAGTAGCTGGGATTACAGGCGTCTGCCACCACATTCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTTGGCCGGGCTGGTCTCAAACTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCGCCGCGTCCAGCCAATTTAGTGGTTTTTTAGAATATTCACAGATGTGTGCAACTATCATTACAATCAATTTTAGAACATTTTCATCACCCTGAAAAGAAACCCTACATACTTTAGCTATCACCCCCAAATCACCACCCTCCTTTCCCTGCTCTCAACCCTAGGCAACTACTAACCTGGTTTCTGTCTCTGTATTTGCCTGTTCTGAATAGTTTATATAAATGAGGCCATACTATATATGGCCTTTTGGACCTGGCTTCTCAAACTCAGGATCATGTTTTCAAGATTCATTCATATTGTAGCATGTGTCAATACGCTACAATATGTGTCAGCACTTCATTCCTTATAGCCAAATAATAGTCCGTTGTGTGACTGTGCCACATGCTGTTTATCCGTTCACCAGCTGATGGGTACTTAGATTGTTTCCACTTGGGTGCTATTATGAATAACGTTGCTGTGGACATTCATGCACAGGATTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8266:HG2_PB_pbsv_16822:HG3_PB_pbsv_16478:HG4_PB_pbsv_16729:HG4_PB_HySA_24468:HG2_PB_SVrefine2Falcon1plusDovetail_4830:HG2_PB_PB10Xdip_13470:HG2_Ill_breakscan11_4732:HG4_PB_SVrefine2Falcon1Dovetail_10407:HG3_PB_SVrefine2PBcRDovetail_8126:HG3_PB_SVrefine2Falcon1Dovetail_10382:HG2_PB_SVrefine2Falcon1plusDovetail_4829:HG4_PB_SVrefine2PBcRDovetail_8394:HG4_Ill_SVrefine2DISCOVARDovetail_11739:HG3_Ill_SVrefine2DISCOVARDovetail_11979:HG2_PB_SVrefine2PBcRplusDovetail_4430:HG2_PB_SVrefine2PB10Xhap12_12209:HG2_Ill_SVrefine2DISCOVARplusDovetail_5185:HG2_10X_SVrefine210Xhap12_11645;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11645:HG2_Ill_SVrefine2DISCOVARplusDovetail_5185:HG2_PB_SVrefine2PB10Xhap12_12209:HG2_PB_SVrefine2PBcRplusDovetail_4430:HG3_Ill_SVrefine2DISCOVARDovetail_11979:HG4_Ill_SVrefine2DISCOVARDovetail_11739:HG4_PB_SVrefine2PBcRDovetail_8394;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0688189;ClusterMaxSizeDiff=0.0684322;ClusterMaxEditDist=0.179196;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=2499;DistBack=6806;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=17:48118476-48118490;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9996;PctRecOverlap=0.9972;SizeDiff=-1;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=2242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:102:1/1:0:30:0:22:1/1:0:6:0:7:1/1:0:43:1/1:13:412:.:2569:.
chr17	48163036	HG2_PB_SVrefine2PB10Xhap12_12211	A	ATATATATTATAGATTTATAATATATATTAGATTATACATTATAGATTTATAATATATATTAGATTATACATTATAGATTTATAATATATATTAGATTATACATTATAGATTTATAATGTATATTAGATTATACATTATAGATTTATAATGTATACTAGATTATACATTATAGATTTATAATGTATATTAGATTATACACATATAGATTTATAATATATATTAGATTATACATATTATAGATTTATAATATATATTAGATTATACATATTATAGATTTATAATATATATTAGATTATGTATATTATAGATTTATAATATATATTAGATTATGTATATTATAGATTTATAATATATATTAGATTATGTATATTATAGATTTATAATATATATTAGATTATGTATATTATAGATTTATAATATATATTAGATTATGTATGTTATAGATTTATAATATATATTAGATTATGTATGTTATAGATTTATAATATATATTAGATTATGTATGTTATAGATTTATAATAGATTATGTATGTTATAGATTTATAATATATATTAGATTATGTATATTATAGGTTTATAATATATATTAGATTATGTATATTATAGGTTTATAATATATATTAGATTATGTATATTATAGGTTTATAATATATATTAGATTATGTATATTATAGGTTTATAATATATATTAGATTATGCATATTATAGGTTTATAATATATATTAGATTATGTATATTATAGGTTTATAATATATATTAGATTATGTATATTATAGGTTTATAATATATATATTAGATTATGTATATTATAGGTTTATTATATATATTAGATTATATGTTTATAATATATATTAGATTATGTATATTAGATGTTTATAATATATATTAGATTATGTATATTATATGTTTATAATATATATTAGATTATGTATATTATGTGTTTATAATATATATGTTAGATTATGTATATTATGTGTTTATAATATATATTAGATTATATATATTATGTGTTTATTATATATTAGATTATATATATTATGTTTATTATATATTAGATTATATATTATGTTTATTATATATATTAGATTATATATATTATATGTTTATTATATATATTAGATTATATATTATATATTTATAATATATATATTAGATTATATATTATATATTTATAATATATATTAGATTATATATTATATATTTATAATATATATATTAGATTATATATTATATATTTATAATATATATTAGATTATATATTATATATTTATAATATATATTAGATTATATATTATATATTTATAATATATATTAGATTATATATTATATATTTATAATATATATTAGATTATATATTATATATTTATAATATATATTAGATTATATATTATATATTTATAATATATATTAGATTATATATTATATATTTATAATATATATTAGATTATATATTATATATTTATAATATATATTAGATTATATATATTATATATTTATAATATATATATTAGATTATATATATTATATATTTATAATATATATTAGATTATATATTATATATTTATAATATATATATTAGAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4431:HG4_PB_pbsv_16730:HG3_PB_pbsv_16479:HG3_PB_HySA_25323:HG2_PB_HySA_30599:HG4_PB_HySA_24471:HG2_PB_pbsv_16823:HG2_PB_SVrefine2PB10Xhap12_12211:HG4_PB_SVrefine2PBcRDovetail_8395:HG4_PB_SVrefine2Falcon1Dovetail_10408:HG3_PB_SVrefine2Falcon1Dovetail_10383:HG2_PB_SVrefine2Falcon1plusDovetail_4831:HG2_PB_SVrefine2Falcon2Bionano_8267:HG2_PB_SVrefine2PB10Xhap12_12210;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12211;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0926711;ClusterMaxSizeDiff=0.090854;ClusterMaxEditDist=0.235686;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1581;DistBack=-629;DistForward=53;DistMin=-629;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=493;REFWIDENED=17:48163037-48163529;PctSeqSimilarity=0.9797;PctSizeSimilarity=0.9863;PctRecOverlap=0.7243;SizeDiff=-22;StartDistance=-431;EndDistance=-431;GTMatch=1;TruScore=89;MatchId=2243.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:112:1/1:1:17:1:40:./.:0:0:0:3:0/1:2:15:./.:10:135:.:1645:.
chr17	48553542	HG2_PB_SVrefine2PBcRplusDovetail_4433	TC	GCCTGCCCCCTTACCTCGCAGCGCGCCTGCCCCCTTACCTCCCAGCGCGCCTGCCCCCTTACCTCCCAGCGCGCCTGCCCCCTTACCTCGCAGCGCGG	10	PASS	ClusterIDs=HG3_PB_pbsv_16484:HG4_PB_SVrefine2PBcRDovetail_8396:HG4_PB_HySA_24475:HG3_PB_HySA_25327:HG4_PB_pbsv_16732:HG2_PB_HySA_30604:HG4_PB_assemblyticsfalcon_10568:HG4_PB_SVrefine2Falcon1Dovetail_10410:HG3_PB_SVrefine2PBcRDovetail_8128:HG2_PB_SVrefine2PBcRplusDovetail_4433:HG2_PB_SVrefine2PB10Xhap12_12213:HG2_PB_PB10Xdip_13495:HG2_PB_pbsv_16826:HG2_PB_SVrefine2Falcon2Bionano_8269:HG2_PB_SVrefine2Falcon1plusDovetail_4832;NumClusterSVs=15;ExactMatchIDs=HG2_PB_PB10Xdip_13495:HG2_PB_SVrefine2PB10Xhap12_12213:HG2_PB_SVrefine2PBcRplusDovetail_4433:HG3_PB_SVrefine2PBcRDovetail_8128:HG4_PB_SVrefine2Falcon1Dovetail_10410:HG4_PB_assemblyticsfalcon_10568;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0995025;ClusterMaxSizeDiff=0.0703518;ClusterMaxEditDist=0.313726;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=96;DistBack=-1;DistForward=99;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=344;REFWIDENED=17:48553422-48553765;PctSeqSimilarity=0.9949;PctSizeSimilarity=1;PctRecOverlap=0.9898;SizeDiff=0;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:1:25:0:14:1/1:1:5:0:8:./.:1:6:./.:.:.:.:.:.
chr17	48998422	HG2_PB_SVrefine2Falcon1plusDovetail_4835	T	TAGAAAGCCTGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATCAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCAGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13498:HG4_PB_pbsv_16734:HG3_PB_pbsv_16487:HG2_PB_pbsv_16828:HG2_PB_HySA_30612:HG4_PB_assemblyticsfalcon_10574:HG4_PB_HySA_24477:HG2_PB_HySA_30611:HG2_PB_SVrefine2PB10Xhap12_12216:HG4_PB_SVrefine2Falcon1Dovetail_10413:HG4_Ill_manta_3829:HG4_Ill_MetaSV_2051:HG4_Ill_GATKHCSBGrefine_11394:HG2_PB_SVrefine2Falcon1plusDovetail_4835:HG2_Ill_MetaSV_1991:HG4_PB_SVrefine2PBcRDovetail_8398:HG3_PB_SVrefine2Falcon1Dovetail_10387:HG2_PB_SVrefine2PBcRplusDovetail_4436;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_MetaSV_1991:HG2_PB_SVrefine2Falcon1plusDovetail_4835:HG4_Ill_GATKHCSBGrefine_11394:HG4_Ill_MetaSV_2051:HG4_Ill_manta_3829:HG4_PB_SVrefine2Falcon1Dovetail_10413;NumExactMatchSVs=6;ClusterMaxShiftDist=0.125589;ClusterMaxSizeDiff=0.125589;ClusterMaxEditDist=0.155039;PBcalls=14;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=314;DistBack=6735;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=17:48998423-48998434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:36:0|1:15:0:0:29:1|0:0:9:9:0:0/1:27:15:0/1:5:30:.:.:.
chr17	49519785	HG3_Ill_150bpfermikitraw_20975	C	CTTGGCTCTTTCCTGGATCTGTCACATTCTCTTTGCTAAGCACCAAGAGGCAAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11655:HG2_PB_pbsv_16831:HG3_PB_SVrefine2PBcRDovetail_8132:HG3_PB_pbsv_16488:HG3_PB_HySA_25334:HG2_PB_HySA_30614:HG3_Ill_svaba_20932:HG3_Ill_Krunchall_22121:HG3_Ill_GATKHC_26474:HG3_Ill_GATKHCSBGrefine_10989:HG3_Ill_250bpfermikitraw_21545:HG3_Ill_150bpfermikitraw_20975:HG2_PB_SVrefine2Falcon1plusDovetail_4837:HG2_Ill_svaba_20729:HG2_Ill_SVrefine2DISCOVARplusDovetail_5194:HG2_Ill_Krunchall_22548:HG2_Ill_GATKHC_26626:HG2_Ill_GATKHCSBGrefine_11048:HG2_Ill_250bpfermikitraw_22195:HG2_Ill_150bpfermikitraw_20911;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11655:HG3_PB_SVrefine2PBcRDovetail_8132:HG3_Ill_svaba_20932:HG3_Ill_Krunchall_22121:HG3_Ill_GATKHC_26474:HG3_Ill_GATKHCSBGrefine_10989:HG3_Ill_250bpfermikitraw_21545:HG3_Ill_150bpfermikitraw_20975:HG2_PB_SVrefine2Falcon1plusDovetail_4837:HG2_Ill_svaba_20729:HG2_Ill_SVrefine2DISCOVARplusDovetail_5194:HG2_Ill_Krunchall_22548:HG2_Ill_GATKHC_26626:HG2_Ill_GATKHCSBGrefine_11048:HG2_Ill_250bpfermikitraw_22195:HG2_Ill_150bpfermikitraw_20911;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0900901;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.230089;PBcalls=6;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=53;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=56;REFWIDENED=17:49519786-49519841;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2246.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:43:./.:18:22:12:16:./.:24:0:2:13:0/1:23:31:./.:.:.:.:.:.
chr17	49690746	HG2_PB_PB10Xdip_13499	ACAGA	CCCCCTCCCTCTCCCCTCTCCCCCTCCCTCTCCCCTCTCCCCCTCCCTCTCCCCCTCTCCCCCCTCCCTCTCCCCCTCCCTCTCCCCCTCCCTCTCCCCTCTCCCCCCTCCCCTTTCCCCCTCCCCTGTCTCCCCCCTCCCCTTTCCCCCTCCCCTGTCTCCCCCCTCCCCCTTTCCCCTCCCCTGTCTCCTCCCTCCCCTCCCTCTCCCCATCTGCCCCTCCCTCTCCCCATCTCCCCCTCCCTCTCCCCTCCCTGTCCCCGCTCCCTCTCTGCCCCCTCTCCCTCCCCCTCCCTCCCCTCCCTCTCACCCACACCCTCTCCCCTCCCCCACCCTCTCCCCCTCCCCCTCTCCCTT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10414:HG3_PB_SVrefine2Falcon1Dovetail_10388:HG2_PB_PB10Xdip_13499:HG4_PB_pbsv_16737:HG2_PB_SVrefine2PB10Xhap12_12217:HG2_PB_SVrefine2Falcon1plusDovetail_4838:HG3_PB_pbsv_16489:HG2_PB_SVrefine2PBcRplusDovetail_4437:HG4_PB_SVrefine2PBcRDovetail_8400:HG2_PB_SVrefine2Falcon2Bionano_8271;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_13499;NumExactMatchSVs=1;ClusterMaxShiftDist=0.199181;ClusterMaxSizeDiff=0.199181;ClusterMaxEditDist=0.307054;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=352;DistBack=25;DistForward=49817;DistMin=25;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:49690751-49690745;PctSeqSimilarity=0.9633;PctSizeSimilarity=0.9312;PctRecOverlap=0.9367;SizeDiff=-26;StartDistance=11;EndDistance=15;GTMatch=1;TruScore=94;MatchId=2247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:32:1/1:0:10:0:14:./.:1:2:0:3:./.:0:1:./.:1:9:.:.:.
chr17	50398489	HG3_PB_SVrefine2Falcon1Dovetail_10389	A	ACCCCAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGCGCCCGCCTCGGCCTCCCAAAGTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4733:HG4_PB_pbsv_16740:HG4_PB_assemblyticsfalcon_10579:HG2_PB_pbsv_16834:HG4_PB_SVrefine2Falcon1Dovetail_10415:HG3_PB_pbsv_16490:HG4_PB_HySA_24489:HG3_PB_SVrefine2Falcon1Dovetail_10389:HG2_PB_SVrefine2Falcon1plusDovetail_4839;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10389;NumExactMatchSVs=1;ClusterMaxShiftDist=0.083958;ClusterMaxSizeDiff=0.0809595;ClusterMaxEditDist=0.236311;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=17:50398490-50398502;PctSeqSimilarity=0.9846;PctSizeSimilarity=0.9696;PctRecOverlap=0.9696;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:46:0|1:45:9:4:30:./.:24:0:0:4:0/1:26:8:0/1:9:34:.:.:.
chr17	50675957	HG2_PB_SVrefine2PB10Xhap12_12221	C	CAGGCTTTAGGGAAAATTACACAATTTCAGCCTGGGTAAATGAGAGGTGCCCTGTCAGCTTATTCTCCCCAGTTCACCCTTTCTCCTCAGGTGATCAGGTGTGGATCAAGGATTGGAACATAGCGCCCTTCTGGCCACGGTGGAAAGGACCTCAGACCATCGTCTTGACCACTCCCACAGCTGTAAAGGTAGAGGGAATCCCAGCCTGGATCCACTGCAGCCACGTGATACCTGCAGCACCTGAGACCTGGGAGGCGAGACCAAGCCCAGACAACCCCTGCAAAGTGACTCTGAAGAATATGACAGGCCCTGCTCCAGTCACACCGGAAGCTGACTGGTCCACCCACGGCTGAAGCATGAGGAAACTCATTGTGGGACTCATTTTCCTTAAATTTTGGACTTGTACAGTAAAGACTTCAACTGACCTTCCTCAGACTGAGGACTGTTCCCAGTGCATACATCAAGTCACTGAGGTAGGACAAAAGATTGCTTCAGTCCTATTATTTTATAGTTAAAAGTGTACCGGGACCCTAGAAGGAGCTTGTTTGTATAATGCTACTCTATACAAGGTATGTAGCCCAGGAAGTGACCAGCCTGATGTGTGCTATAATCCATCTGAGCCCCCATGACTACCATTTTTGAAATAAGATGGAGGACTGGCAGCTGGGGAAAAAGCTGATATGAGTAAAGTAGTAACTAGAACAGAAGAGAAAAGAGTCCCCTAACAAATTATCTTAAAATTTGACACTTGTGCGGCAATCAACAGTGACCCGTACGGAAATAGAATAAGATGTAGCTCTCTAGATTGGGAAAAGAGCTGTATAGTAGAAAATAAGCATGTTTGTCATGAATTAGGACTGTGTAGTGATGAATGTATTTACTGGTCCTGTGTCATTTAGGCCACCTGGAAAAAGATAAGAAGGACCCTGACTGACTTCAAAAAGGAAAGAGTAACTCTTCCTGCACTAGTGGTCACTGTAACTCATTAGAATTATACCAATCCCCTTGATCCCCACTGGAAAACAGGAGAGTATGTAACTCTAGGAATCAATGGAGCTGGACTGGATCCCTGAGTAAATATTTAGTCCAAGGGGAGGTGCTCTCCCAAACCAGTGTTTCAGTTTCAGACCTTTTATGATGAGCTGAATCTGCCAGCACAAAAGCTCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAGACCAAGAACTTGTTTCTCCAGTTAGCAGAAAATGTACCTCATTCCCTCAATGTTACTTCTGGTTATGTATGTGAGGGAACCACTATGGGAGACTGATGGTCTTGGGAAGCCTGAATTGGTGCCTACTGATCCAGTTCCTGACATAATTCCAGTCCAGAAGGCCCAAACTAGCAACTTCTGGGTCTTGAAAACCTCAATTATTAGACAATACTACATAGCTAGAGAAGGAAAAGACTTCACCATCCCTGTAGGAAGGCTCAATTGTCTAGGATAGAAGCTGTATAACAGCACAACAGGAACAGTCAACTGGTGGGGTCTAAACCACAGTGATAAGAATACCTTCAGTAAATTTCCTAAATTACAGACTGCTCAGGCCCATCCAGAATCTCACCAAGACTGGACGGCTCCCTCTGGACTATACTGGATATGTAGGCACAGAGCCTACACTCAGTTACCTGATCAATGGGCAGGTAGTTGTGTCATTGGCACCATTAAGCCATCCTTTTTCCTACTGCCCATAAAAGCAGGTGAGCTCTTAGATTTCCCTGTCTATGCCTCCTGAGAAAAGAGGAGCAGAGCTATAGGAAATTGGAAAGATGATGCGTGCCCCAACCCCCCGAAAGGATCATACAGTACTATAGGCCTGCAATATGAGCACAAGATGGCTCGTGGGGATACCGATCCCCCATCTACATGCTCAACCGGATCATACAGGTTATCTTAGAAATAATCACTAATGAAACTGGCAGAGCTTTGACTCTTTTAGCCCAGCAGGAAACCCAAAGAGAAATGCTATCTATCAGCATAGATTGGCCTTAGACTATCTGCTGGCAGCTGAAGGAGGAGTCTATGAAAATTCAACTTGACCAATTGCTGTCTGCAAATAGATGATCAAGGACAAGTAGTCAAATATATAGTTAGAGACATGACAATGCTGGCACATGTGCCCATGCAGGTTTGGCATAGGTTTGATCCTGGATCCCTGTTTTGAAAGTGGTTTCCAGCTCCAGGAGGATTTAAAACTCTTATTATAGGAATAATAATAGTGTTAGGAATCTTCGTGTTACTCCCCTGTATGTTACCTGTATTTCTCCAGTTGCTAAGAGGCTTCGTTACCAATTTAGTTCATCAAAAGACCTCAGCACAAGTATATTACATGACTCACTATCGATCCATCTCACAGGAAGACCTGGGTAGTGAGGATAAGAGTGAGAACTCCTACTAGTGAGTGAGGTTCTCAAAGTGGGGAATGAGGAGAGAGGCCATTTCTCTTACTGTCCCCTGTCTCCAAAGAAAAGGAGGAAGTAAAAACTGAAAAATAACAGACTGATCGGCACCACTGGCCAGGCCTGTAGGTTAAAGATTAACCCCCACCCTAACTGCTTGTGCTATCTATAGATCACAGACAATGGTATGGAGAAATACTTGCCTTGCTCACCACCCCCACATAGTCACATACCACATGCTTGCTCAATCTATCATGACCCTTTCACGTTGACCCCTAGAATTGTAAGCCCTTAAAAGGGCCAGGAACTCTTTCTTCAGGGAGCTTCGTTCTTGAGACACAAGTCTGCTGATGCTCCCAGCCAAATAAATCCTCTTCCTTCTTTAACCCGGTTTCTGAGGGGTTTTGTCTGAGGCTCGTCCTGCTACACTTCTAGTATTTTTATAGTGTTGGGTGTTTTGTTTAAGACTTCAATACATTTTGAGTTGATTTTTGTATATCATGAGAAATAGGGATCTAGTTTCTTTCTTTTGGATAGGGATATCCAGTTCTAGCACCATTTCTTGAAGAGAGTGTTAATTTCTCAATCTATGTTCTTGGTGCCCTTGTTGAAAATCAGTTAGCTGTAAATATCTGGGTTTATTTCTGAGTCATTACTCTGTTCCATTCATCTATGTGTCTGTTTTCATACCAATACCATACTGTTTTGTTTACCATAGACCTGTAAGGTATTGTGATGCCTCCAGCTTTATTCTTTTTGCTTAATATTGCTGTGACTATTTGAGATCTTTTATGGTTCTATACAAATTTTAGGATTTTTTTTTTTCATTTTGTGAAGAATGTCATTGGTATTTTGATAGAGATTGCCTCAAATCTGTAGATCTCTTTGGGTAGTACAGATATTTTAGCATATTAATTCATCCAGTTTATAAATATGAGATGTCTTTCCAAGTTTTTGTGTCTTCATTTCATTAGAGTTTTATAGTTTTATTTGTAGAGATATTTCCTGGGTAAATTTATTCCTAGGTATCTTATTTTTTGGAGTTGTTATAAATGGAATTGCTTTATTTCCTTTTCAGCTAGTTTTCTGTTGAAATATAGAAACACTACTGATTTTTGCATTTTGATTTTACATCCTACAACTTAGCTGAATTTGTTTATCACTTCTATGAGTTTTTTTGATTGAATCTTTACTCTTTTTCCATATATCAGGTCATGTCATATGCAAATGGGTGTCCTTTATTTATTTTTCTTGCGTAATTGCTATGGAAGTTCTAGGTTGGGACGTCCAGTACTATCTTAAATAAGAATGATAAAAGTGATCATCCTTTCTGTTCTAATTCATACAGAAAAAGCTTTCAGCTTTTTCCTAATCTGTTTTTTTTTTTCTTTTTTGCTGTGGGTTTTTTTACATATGGCCTTACTGTGTTAAGGTATATTCCTTCTATATCTAAGTTGTTGTGAGTTTTTATCATGGAGAAGGGATGTTGAATTTTATCAAATACATTTTTCTGTGTCTATTGAGATGATTATTTGGTTTTTATCCTTCATTCTGTTAATGTGGTGTATCACATTTATTGTTTTATGTATGTTGAACCATCCTTGCATCCACGTTAATCATGTTGTATAAATTTTTAATGTGCTTTTGGATTCAATTTACTAATAGAGGCATTTGGAGCTGTAAATTTCCCTCTAACCCTAGTTTAGCTATATCCCATATACTTTGCTGTTTTCTCAGTCTTCAAACAATGAAAAATAGGAGAAGAAAATAACTGGATAAATTATTCATTCTCCCTCCTGTACTAATCAAGGAATCTGACCCTCAGTGATACAATGTAGTACATTCTGAAAATCTTAGTGGGTAAAAAACTAAGCTATGGTTGTATTTGCTTGAAAACTTACAGCTAACGATGAAACAGATGCCCTATTGGTTTTTCCTTCTTCTTTGGTATCTCTTTATCTCTACTCTTGTTGCACTTGACACTCCAATAAAACGTTACCCTATAATTGCTATATCAGGATCATCTGTGTTCTGAAAGACCCATGCTAAGACGTACATGGCAATCACAATGTATACGTTTGCTAAGAGTCCTTAAATGTTATGTCCATTAACCATGTGGAAAATTGGAGTATTATCATAGATTTAAATCTTTAATTCAATATCAGAAACCAAAAAAAGAAAACAGTTATTCTACTATCTCAATGCAGCTGGTATCTGTGCTCTCCTCTACATGTCTACAAATTCTACCTAGGTTTACAAATTGTCTCTTGTTTCATCTTATCTGGACAGGCTTATTAGCTTTCTAAACAGGGTGCCACCTCCAGATATACCGTTTTCAAACTCTGCAATAATGATTTTTTTAAAAAAATTGATTCATATTATCTTACTTCATAACAATAACTTTCTATCTTTTTGATAAGTGTTGTCCATTTTCATTTTTTTGGTCATTTTAATCTATAATTTATACTAATATATAATTGAAATTGGTTCAATGGATAAAATCCAGATATACCTTAGTTTATGACCAGTTTATGGGATTTTAAGAAAAAAATTATGACTGTATCCTATTCTCACTTTCAGAATCTATCCATGAATATCTCAGTACTCAATATACGTATATATTATTTATATATAAATATAGATATATAATATATATATTATAAATATATATTATGTGTATTGAGTACTGAGATATTAACGAACTCATATATTTATTCATTCATATATTTATTCATTCATATATTTATTCATAATATATGAATTTATTCATAATATATGTTTATGTATATATATTCATCCATTGATGTTATTTATATATATAAATGTAATAAATATAAACAATATATGTGTAAAAACTTAGTACTGAGGTATTCATGGGTAGATTCTGAAATATAAATTTATATTATATATAATGTAAATATAATACATCTGTGTGTATTCATAAATGAACCTGCTATCTCTCTGCACTCATTTTTTACTGCTTCCCGAATCTGTGCTATAATCTCGTCTTTCTGAAGTAAATTATTTCTCTATATGTGCCAGATACATGCTATAAACATTCACAATTGTTCTATTCTCATTTACTATTTTTTGCTTAGAACATCCTCCATGGATGAATTTATCTGGCCAAGCTCTGTTCACTTTTTAAGGCGTAGCATAAATATCAAACTCCAAACACAATTTTTCCCTCTTCCTTATCCTGAGATTGTTATTCTTTGAGGTCTCTTAGGGCTATGGACATAGGTCTTCCATCACATTGCATATACCCATCTCTCTTTCAACTGTGAGATTCTTGAAGGCAGAAACCATGTCCCATGTCCCATGTGCCTCTCTGTGCCCCGAGTTTAAAAAGTTACTTGGCAAAAAGAATCACTAAAATGTTATTGAATTAAATTGATTCCTTGCTATAAAACACACATTGTTATAGAGAATGGGCTGTAGGTATTACTGTAAAATTTCAAGCATAAAGCACATAAAATGAAGGCACATTTGTCGTCATTAGACAAAATAGATAAATCTTTAAATATATACTCAAAAGTAGCTATCTTGCCACATTTCTCATAGCTTTAAAGGAGAAGATTGCTTAAACACTGGAAGACAATATAATGGAGAGATGTTCCACACTTTGGATTCCATTTATGCTTGGTAGTTGAAGATAAACCACTGGAAAAAATGGTGGTAATGATAATAAAATCATTGAGCCTAAAATGACTTGTGTGTATGAATTCAAAAGCCACAGGGCCTTTTTCTCCAATGATTCAAGTGAACAAAAGACACTCTGATATGCTGCATAGTTTACCTTCTAATTTTTTTAAAGTCTAAGAATCTATCATGGTGGCTGAAGTATAAAGATTTTAAAAAAATGATAGGCAGCCTTTAATGTAATTTTTAATACTATATTCTATGTCCTCTGACTTCAAAATTGTAGCACATTTTACACAACATTATCAGTGGTACCAGATCACAGAATACTTTTGAAATAAGCATATCTTCGTACTGTTTACATTTTTAAATCCCTTTAAGTACTACTATGGGATATAAAAATGCACTGCAATTCCTTTATAGCTATATAAATGCTGTGGGTTGAATTGTCCAAATTGTGTACATCTCAACTACTTGATGTGAAATGTGTGCTGTTTATTTCTGTAGAATAAAAAACAAGGTAAATATTAACTCAATTTTTTTGTTTTACTGTTACAGGTAACAACAAATTCATTTCTCTTCAAACTGAAATAAATAGTTTTGAGAAAATACTTTTCAGTTTTGGGTTTAAAGAAAAACATATTAATGAAATATTAACAGAATATGATTACTGTCTATATGTTAAAATTTATATGTTACAAGAAGGGCATGTTCAAAGGTTAAAAATAGCTTGAGTGGAAATTTTAAATGAAGTTTTCTCTTCATAGTTAGAAACTAGAGAGTTGAAAGAGATCTACACAAGTAAAAAGTCACTTATTTTGTTGTACTATGCTTCTATATTTAGTTATGTCTAGGTATACATATACACAAGTCTAACATATACATATAAATACACGTATGTGTGTGCGTATCTGTGTGTTTTATAGTTAATGATATATTTTGCAGATCTGAGAAAAATGGGCTGCTAGAGCCAATGGGATAGTAAAAATGTCAGAGAAAGGGGAACAATTTTGGAAACATTATGAGAGAGGCAACTTGGAGACAACAAGAACAGAGAATGGGATTTGGGATTAAGTTCGTTTTTAATGAGAGTATTCTCTACCACCTCCCAGTGGAATCATCAGAAAACTCAAGATCACTAGATACCCTTTGGGAGTAATTGAATTTTTAATGTTATCTGTAATAAGTGTTTTGTTTTATTTCAGTGTTAATGTGTGTAAAAACAGAGGTGGCTTGCTAAATCAGCCCTCAGTATTAAAATTCATTCATGTCTTCAGCAAATGCCATTGAAGGCATACCCCATGCCAGCCATTCATTGATTGGCTGTGATAATATGTTGATGAGCCAGATATCATCCGACTTCAAGGGGCCCTCGACATGTGCCTGGCTGTGGAAACATATTCCATGTGTGTACAGACAAATTAATTACAAAGGAGAATGATAAGGGTCAATAAACTCAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4734:HG2_PB_pbsv_16835:HG3_PB_SVrefine2Falcon1Dovetail_10390:HG4_Ill_SVrefine2DISCOVARDovetail_11747:HG2_PB_SVrefine2PB10Xhap12_12221:HG2_Ill_SVrefine2DISCOVARplusDovetail_5199:HG4_PB_SVrefine2PBcRDovetail_8403:HG2_10X_SVrefine210Xhap12_11659:HG2_PB_SVrefine2PBcRplusDovetail_4438:HG2_PB_SVrefine2Falcon2Bionano_8273:HG3_PB_SVrefine2PBcRDovetail_8133:HG3_Ill_SVrefine2DISCOVARDovetail_11992:HG2_PB_SVrefine2Falcon1plusDovetail_4840:HG4_PB_SVrefine2Falcon1Dovetail_10416:HG2_PB_HySA_30624:HG2_PB_PB10Xdip_13502;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5199:HG2_PB_SVrefine2PB10Xhap12_12221:HG4_Ill_SVrefine2DISCOVARDovetail_11747;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0784742;ClusterMaxSizeDiff=0.0783457;ClusterMaxEditDist=0.124711;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=7525;DistBack=79598;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=17:50675958-50675962;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2249.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:136:1/1:0:13:0:13:1/1:0:5:0:5:1/1:0:41:1/1:0:659:.:7438:.
chr17	51031203	HG3_Ill_GATKHCSBGrefine_10991	T	TTATTTATTTATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_Ill_GATKHCSBGrefine_11398:HG3_PB_assemblyticsfalcon_10778:HG3_PB_HySA_25345:HG4_PB_pbsv_16741:HG2_PB_pbsv_16837:HG3_PB_pbsv_16492:HG4_PB_HySA_24494:HG3_PB_SVrefine2Falcon1Dovetail_10391:HG3_Ill_GATKHCSBGrefine_10991:HG2_Ill_MetaSV_1992:HG2_Ill_GATKHCSBGrefine_11050:HG4_Ill_MetaSV_2053;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11050:HG2_Ill_MetaSV_1992:HG3_Ill_GATKHCSBGrefine_10991:HG3_PB_SVrefine2Falcon1Dovetail_10391;NumExactMatchSVs=4;ClusterMaxShiftDist=0.107595;ClusterMaxSizeDiff=0.107595;ClusterMaxEditDist=0.180704;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=312;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=17:51031204-51031208;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:45:./.:18:19:16:14:0|1:18:0:0:5:0/1:33:11:0/1:9:35:.:.:.
chr17	51427856	HG2_Ill_GATKHC_26644	T	TAAAACTGAGAAGTTCCACTGCAGTCTGCAGTCAGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4735:HG3_PB_pbsv_16494:HG2_PB_pbsv_16840:HG3_PB_SVrefine2PBcRDovetail_8134:HG3_PB_SVrefine2Falcon1Dovetail_10392:HG3_Ill_Spiral_17203:HG3_Ill_SVrefine2DISCOVARDovetail_11995:HG3_Ill_GATKHC_26492:HG3_Ill_GATKHCSBGrefine_10992:HG2_Ill_SVrefine2DISCOVARplusDovetail_5204:HG2_Ill_GATKHC_26644:HG2_Ill_GATKHCSBGrefine_11053:HG3_PB_HySA_25346;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11053:HG2_Ill_GATKHC_26644:HG2_Ill_SVrefine2DISCOVARplusDovetail_5204:HG3_Ill_GATKHCSBGrefine_10992:HG3_Ill_GATKHC_26492:HG3_Ill_SVrefine2DISCOVARDovetail_11995:HG3_Ill_Spiral_17203;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0818713;ClusterMaxSizeDiff=0.0584795;ClusterMaxEditDist=0.149425;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=82;DistBack=9923;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=17:51427857-51427870;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:36:0|1:34:2:0:33:0|1:25:0:0:15:0/1:41:15:./.:.:.:.:.:.
chr17	51957118	HG3_Ill_MetaSV_2132	T	TAGAAAACCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAATAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_24497:HG4_PB_pbsv_16742:HG2_PB_pbsv_16841:HG3_PB_pbsv_16497:HG3_PB_assemblyticsfalcon_10782:HG2_PB_HySA_30632:HG2_PB_SVrefine2Falcon1plusDovetail_4842:HG2_PB_SVrefine2Falcon2Bionano_8274:HG4_Ill_MetaSV_2054:HG4_Ill_GATKHCSBGrefine_11399:HG3_Ill_MetaSV_2132:HG2_Ill_MetaSV_1993:HG2_10X_SVrefine210Xhap12_11663:HG4_PB_SVrefine2PBcRDovetail_8404:HG4_PB_SVrefine2Falcon1Dovetail_10419:HG3_PB_SVrefine2Falcon1Dovetail_10393;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11663:HG2_Ill_MetaSV_1993:HG3_Ill_MetaSV_2132:HG4_Ill_GATKHCSBGrefine_11399:HG4_Ill_MetaSV_2054;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0933126;ClusterMaxSizeDiff=0.0933126;ClusterMaxEditDist=0.170732;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=322;DistBack=33;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=17:51957119-51957128;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:48:0|1:35:1:1:36:1|0:0:5:20:0:0/1:28:16:0/1:7:33:.:.:.
chr17	52283720	HG2_PB_SVrefine2Falcon1plusDovetail_4843	A	ATGTACAAAAATCACTAGCATTCCTATACAGCAACAATGGCCAAACTAAGAGCCAAATCAGAAACAATCCCACCTATGAG	20	PASS	ClusterIDs=HG3_PB_HySA_25351:HG2_PB_pbsv_16842:HG3_PB_pbsv_16498:HG2_PB_HySA_30633:HG2_Ill_breakscan11_4736:HG3_Ill_svaba_20948:HG3_Ill_manta_3693:HG3_Ill_Spiral_17207:HG3_Ill_Krunchall_22139:HG3_Ill_GATKHC_26497:HG3_Ill_GATKHCSBGrefine_10993:HG3_Ill_250bpfermikitraw_21564:HG3_Ill_150bpfermikitraw_20992:HG2_PB_SVrefine2Falcon2Bionano_8275:HG2_PB_SVrefine2Falcon1plusDovetail_4843:HG2_Ill_svaba_20747:HG2_Ill_manta_4521:HG2_Ill_SpiralSDKrefine_6838:HG2_Ill_SVrefine2DISCOVARplusDovetail_5207:HG2_Ill_Krunchall_22564:HG2_Ill_GATKHCSBGrefine_11054:HG2_Ill_250bpfermikitraw_22213:HG2_Ill_150bpfermikitraw_20929:HG2_10X_SVrefine210Xhap12_11665;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11665:HG2_Ill_150bpfermikitraw_20929:HG2_Ill_250bpfermikitraw_22213:HG2_Ill_GATKHCSBGrefine_11054:HG2_Ill_Krunchall_22564:HG2_Ill_SVrefine2DISCOVARplusDovetail_5207:HG2_Ill_SpiralSDKrefine_6838:HG2_Ill_manta_4521:HG2_Ill_svaba_20747:HG2_PB_SVrefine2Falcon1plusDovetail_4843:HG2_PB_SVrefine2Falcon2Bionano_8275:HG3_Ill_150bpfermikitraw_20992:HG3_Ill_250bpfermikitraw_21564:HG3_Ill_GATKHCSBGrefine_10993:HG3_Ill_GATKHC_26497:HG3_Ill_Krunchall_22139:HG3_Ill_Spiral_17207:HG3_Ill_manta_3693:HG3_Ill_svaba_20948;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0745342;ClusterMaxSizeDiff=0.0372671;ClusterMaxEditDist=0.182927;PBcalls=6;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=79;DistBack=54201;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=17:52283721-52283729;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:18:0|1:32:0:0:16:0|1:22:0:0:32:0/1:30:29:./.:.:.:.:.:.
chr17	53509212	HG4_PB_SVrefine2PBcRDovetail_8406	A	AGGGAAGGGAGGGGAGGGCAGGGGGAGGGGGAGGGGGAGGGGAGGGGAAGGGCAGGAGAGGGGAAGGGCAGGGGAGGGGAAGGGGAGGGGAGGGGAAGGGGAGGGGAGGGAAGGGGAAGGGGAGGGGAGGGAAGGGGAAGGGGAGGGGAGGGAAGGGGAAGGGGAGGGGATGGGGAGGGGGAGGGGAGGGGAAGGGGAGGAGGGGAGGGGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4847:HG2_PB_SVrefine2PB10Xhap12_12232:HG3_PB_pbsv_16501:HG2_PB_SVrefine2Falcon2Bionano_8277:HG3_PB_SVrefine2PBcRDovetail_8138:HG4_PB_pbsv_16747:HG4_PB_SVrefine2PBcRDovetail_8406:HG2_PB_SVrefine2PB10Xhap12_12231:HG2_PB_pbsv_16847:HG2_PB_SVrefine2PBcRplusDovetail_4443:HG3_PB_SVrefine2Falcon1Dovetail_10396;NumClusterSVs=11;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_8406;NumExactMatchSVs=1;ClusterMaxShiftDist=0.234694;ClusterMaxSizeDiff=0.234694;ClusterMaxEditDist=0.291457;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=211;DistBack=105082;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=130;REFWIDENED=17:53509213-53509342;PctSeqSimilarity=0.9649;PctSizeSimilarity=0.9953;PctRecOverlap=0.4502;SizeDiff=1;StartDistance=-116;EndDistance=-116;GTMatch=1;TruScore=80;MatchId=2254.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:3:27:1/1:1:9:2:13:./.:0:0:0:1:./.:0:0:./.:.:.:.:.:.
chr17	54870092	HG3_PB_pbsv_16508	G	GTGATGGGTGATGATGGGGTGATGGTGATGAGTGGTTGAGAGTGGTGGTGGGGGTGGTAGTGGTGGGGATGAGGTAGTGGTTGTTTGGTGACGATGGTTAGTGATGGTGGTGGTGGTGGTGGTGGTTGGTGACAGTATGATGATGTGTGAGAGTGGTGGTGGGGTGGTAATGGTGGTGGTGAGTGGTGGTGATAGGTAATGATGGACGGGTGACGGTGTGGTGGATGATCGGTGGTGATCGGTGATTCGGTGGTGATCGGTGGTTGTTTCGATGGTGGTGGTGGTTGGGTTGGTCGATTTTGATGGTGGTGTGGTTGATAGTTGATGATGGTGGTGATGGTGGTTGGTGATCGAGTGGTGGTGATCGGTGATTGATGGTGGTGATGGTGGTGTGGTTGATGGTGCGTGACTGATGGTGGTGATAGGTGGTGTGATGGTGATTGGTGGGTTGGTGTGGTGAGTGATGCGTGAGATGGGCGTGATTGGTGGTGGTGATTGGTGATGTATGGTGGTGATGGTGGTGATTGGTGATTGGTGATGTGGATGATGGTGGCAGTGATGGTAGGTGATGGTGGTGTGGTGATGGTTTGAGGTGGTGATGGTGGTGATGGTGGTGGGATGGTAGATTGGTCGGTGGTGGTGATGGTGTGGTGGTGGTGATGGTGGTGATGGTATGGTGGTGGTGGTGCATGGTGTGGTGGTGGTGATGGTGGTGGTGGTGATGTGGTGGTGGTGGTGGTGGTGATGGTGTGGTGTGGTGATTGGTTGGTGGTGATTGGTGGTTGGTGATGGTTGATGATGGTGGTTGATGGTTTGGTGGGGATGGTGATGGTGTGCATGTGGTGGTGATGGTGGTTGATGTGAGTGGTGGATGGTGGTGGGTGGTGATTGGTGGTGGTGGTTGATGGTGAGGGTGGTGATTCGGTGGTGGTGATGGTGGTGATGATGGTGGTGGGATTGGTGCATGATGGTGGTTGATGGTGCATGGTGGTGGTGTCGGGTGGTAGGTGGTGGTGATGTTGGTCTGATGGGTGGTGGTTGGTGATGGTGATGATGGTGATGGTTCTGGTGGGTTGATGGTGGATGATGGTGGTTGATTTGGTGGTGGTGTTGGTGAGTGATGTGGTGGTTGATGAATGGTTGGTGAGGTGATGCAATC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10398:HG2_PB_assemblyticsfalcon_10826:HG2_PB_SVrefine2Falcon1plusDovetail_4849:HG2_PB_pbsv_16851:HG4_PB_pbsv_16753:HG2_PB_SVrefine2PB10Xhap12_12236:HG4_PB_SVrefine2Falcon1Dovetail_10424:HG3_PB_pbsv_16508:HG3_PB_SVrefine2PBcRDovetail_8139:HG2_PB_SVrefine2PB10Xhap12_12235:HG2_PB_SVrefine2PBcRplusDovetail_4445:HG2_PB_SVrefine2Falcon2Bionano_8279;NumClusterSVs=12;ExactMatchIDs=HG3_PB_pbsv_16508;NumExactMatchSVs=1;ClusterMaxShiftDist=0.138376;ClusterMaxSizeDiff=0.138376;ClusterMaxEditDist=0.24574;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1158;DistBack=-287;DistForward=16981;DistMin=-287;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=17:54870093-54870092;PctSeqSimilarity=0.917;PctSizeSimilarity=0.9223;PctRecOverlap=0.9223;SizeDiff=90;StartDistance=1;EndDistance=1;GTMatch=1;TruScore=92;MatchId=2255.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:0:16:3:26:./.:126:38:94:25:./.:0:0:0/1:13:107:.:1167:.
chr17	54888905	HG3_PB_HySA_25363	G	GGGGCTCGAGACTCTCTTCTTGCAGAGCCGCAGTCCATTGTACCAGATAACCTCGTTAGTGAGCCCAAATCAGGCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12237:HG3_PB_pbsv_16509:HG3_PB_HySA_25363:HG2_PB_HySA_30647:HG2_Ill_250bpfermikitraw_22233:HG3_PB_SVrefine2PBcRDovetail_8140;NumClusterSVs=6;ExactMatchIDs=HG3_PB_HySA_25363;NumExactMatchSVs=1;ClusterMaxShiftDist=0.089172;ClusterMaxSizeDiff=0.0636943;ClusterMaxEditDist=0.152866;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=75;DistBack=1462;DistForward=78;DistMin=78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=156;REFWIDENED=17:54888828-54888983;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9868;PctRecOverlap=0.026;SizeDiff=-1;StartDistance=74;EndDistance=74;GTMatch=0;TruScore=66;MatchId=2256.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:33:./.:9:16:17:8:./.:1:0:1:7:0/1:9:12:./.:.:.:.:.:.
chr17	54947569	HG2_PB_SVrefine2PB10Xhap12_12238	T	TAAGAAATGATTTGACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4737:HG2_PB_pbsv_16853:HG4_PB_pbsv_16754:HG2_PB_HySA_30649:HG3_PB_pbsv_16510:HG2_PB_HySA_30648:HG2_PB_assemblyticsfalcon_10827:HG4_PB_assemblyticsfalcon_10600:HG4_PB_HySA_24509:HG2_Ill_MetaSV_1995:HG2_PB_SVrefine2Falcon1plusDovetail_4850:HG4_PB_SVrefine2PBcRDovetail_8407:HG4_PB_SVrefine2Falcon1Dovetail_10425:HG4_Ill_MetaSV_2056:HG3_Ill_MetaSV_2133:HG4_Ill_GATKHCSBGrefine_11410:HG3_PB_SVrefine2PBcRDovetail_8141:HG3_Ill_GATKHCSBGrefine_10999:HG2_PB_SVrefine2PBcRplusDovetail_4446:HG2_PB_SVrefine2PB10Xhap12_12238:HG2_PB_SVrefine2Falcon2Bionano_8280:HG2_Ill_GATKHCSBGrefine_11064:HG2_10X_SVrefine210Xhap12_11671:HG3_PB_SVrefine2Falcon1Dovetail_10399;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11064:HG2_PB_SVrefine2Falcon2Bionano_8280:HG2_PB_SVrefine2PB10Xhap12_12238:HG2_PB_SVrefine2PBcRplusDovetail_4446:HG3_Ill_GATKHCSBGrefine_10999:HG3_PB_SVrefine2PBcRDovetail_8141:HG4_Ill_GATKHCSBGrefine_11410;NumExactMatchSVs=7;ClusterMaxShiftDist=0.156667;ClusterMaxSizeDiff=0.156667;ClusterMaxEditDist=0.262351;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=294;DistBack=58584;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=17:54947570-54947583;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9966;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2257.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:81:1/1:0:24:0:29:1/1:0:8:0:16:1/1:0:19:./.:.:.:.:.:.
chr17	54955462	HG3_Ill_150bpfermikitraw_21006	G	GGAAGAGGAAGAAGAAGAAGAAGAAGAAGAACAAGAACAAGAAGAAGAAGAACAAGAA	20	PASS	ClusterIDs=HG3_Ill_150bpfermikitraw_21006:HG3_Ill_GATKHC_26514:HG3_PB_HySA_25364:HG4_Ill_GATKHCSBGrefine_11411:HG4_Ill_150bpfermikitraw_21062:HG2_PB_pbsv_16854:HG3_PB_pbsv_16511:HG2_PB_HySA_30650;NumClusterSVs=8;ExactMatchIDs=HG3_Ill_150bpfermikitraw_21006;NumExactMatchSVs=1;ClusterMaxShiftDist=0.247619;ClusterMaxSizeDiff=0.247619;ClusterMaxEditDist=0.327273;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=155;REFWIDENED=17:54955410-54955564;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:18:0|1:18:4:2:12:./.:14:1:1:16:0/1:9:13:./.:.:.:.:.:.
chr17	55208784	HG4_PB_SVrefine2Falcon1Dovetail_10426	A	AGAGGGTGGGCCGGCTGCAGGGGGTGAGGGTGGGTGTGCTGGAGCGGGTGAGGATGGGCCGGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGATGGGCCGGCTGGAGGGGTGAGGGTGGGCGTGCTGGAGCGGGTGAGGATGGGCCGGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGGGTGTGCTGGAGGGGGTGAGGTGGGCGTGCTGGAGGGTGAGGGTGGGCGTGCTGGAGGGGGTGAGGGTGGGCGTGCTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTGGAGGGGGTGAGGGTGTTGGAGGGGGTGAGGGTGGGGGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGTGAGGTGGGCGTGTTGGAGGGGATGAGGGTGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGGTGTTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGTGTGTTGGAGGGGTGAGGGTGGTGTGTTGGAGGGTGAGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTTGGAGGGGGTGAGGTGGGCGGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGCGGGTGAGGATGGGCTGGCTGGAGGGGGTGAGGGTGGGCGGGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGCGGGTGAGGATGGGCTGTGCTGGAGGGGGTGAGGGTGGGCGGGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGTGTTGGAGGGGATGAGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGTGGGGTGTGAGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGTGAGGGTGGGTGTGCTGGAGCTGAGGATGGGTGGCTGAGGGGGTGGGTGGGTGCTGGAGGGGGTGAGGGTGGGGTGTTGGAGGGGGTGAGGGTGGGGCTGGAGGGGTGAGGGTGGTTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGGGGGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10426:HG2_PB_SVrefine2Falcon1plusDovetail_4852:HG2_PB_SVrefine2PBcRplusDovetail_4448:HG3_PB_SVrefine2Falcon1Dovetail_10400;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_10426;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0471567;ClusterMaxSizeDiff=0.0471567;ClusterMaxEditDist=0.0687023;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1407;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1259;REFWIDENED=17:55208785-55210043;PctSeqSimilarity=0.9075;PctSizeSimilarity=0.887;PctRecOverlap=0.8657;SizeDiff=159;StartDistance=-110;EndDistance=-110;GTMatch=1;TruScore=88;MatchId=2259.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:./.:0:0:0:0:./.:0:0:0:0:./.:0:0:0/1:3:8:.:1804:.
chr17	56046631	HG2_PB_SVrefine2Falcon2Bionano_8284	T	TGGGCCGGGCGCGGTGCCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGATCATCCTGGCTAACACGGTGAAACCCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAACAACAACAAAGAAAAAAAAAACAAATGAACAAAAAACCACCCTGATAGTTTTTGTTGTTGTTGTTGTTTTTGAGATGGTGTTTCACTCTTGTTGCCCGGGCTGTAGTGCAATGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCCGCTAATTTTTCTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCTCCCGCCTCAGCCTTCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGACCCGGTAGAGAATCTTAAGTATAAAACTTCTTTCTCTTATCATGTCATGATAAAAACTATAAGGGCG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10402:HG3_PB_pbsv_16515:HG2_PB_HySA_30668:HG4_PB_pbsv_16760:HG4_PB_HySA_24521:HG3_PB_HySA_25372:HG4_Ill_MetaSV_2059:HG2_PB_HySA_30667:HG2_PB_PB10Xdip_13521:HG2_PB_pbsv_16858:HG4_PB_SVrefine2Falcon1Dovetail_10428:HG2_10X_SVrefine210Xhap12_11674:HG4_PB_SVrefine2PBcRDovetail_8409:HG2_PB_SVrefine2Falcon1plusDovetail_4855:HG2_PB_SVrefine2PBcRplusDovetail_4450:HG2_PB_SVrefine2Falcon2Bionano_8284:HG3_PB_SVrefine2PBcRDovetail_8144:HG2_PB_SVrefine2PB10Xhap12_12243;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8284:HG2_PB_SVrefine2PBcRplusDovetail_4450;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0672495;ClusterMaxSizeDiff=0.0659045;ClusterMaxEditDist=0.209549;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=720;DistBack=58671;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=196;REFWIDENED=17:56046632-56046827;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9986;PctRecOverlap=0.9515;SizeDiff=-1;StartDistance=-35;EndDistance=-35;GTMatch=0;TruScore=98;MatchId=2261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:./.:0:1:0:1:./.:0:6:0:1:1/1:0:40:1/1:4:109:.:790:.
chr17	57628941	HG2_PB_SVrefine2Falcon2Bionano_8286	C	CCCAGGCTGGAGTGCTGGAGTGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTTCCAAAGTGCTGGGATTACAGGCGTGAGCCATCGTGCCCAGCCAGGAAATCTTTTTAATTCTGTTGCTTTTAAGATTTTCTCTAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAAAATTTAGCCGGGCATGGTGACGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCACT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13525:HG2_PB_pbsv_16862:HG3_PB_pbsv_16517:HG4_PB_pbsv_16764:HG4_PB_assemblyticsfalcon_10611:HG2_PB_assemblyticsfalcon_10848:HG2_PB_assemblyticsPBcR_10464:HG3_PB_assemblyticsfalcon_10813:HG4_PB_HySA_24526:HG4_Ill_MetaSV_2060:HG2_Ill_MetaSV_1999:HG3_PB_SVrefine2Falcon1Dovetail_10404:HG4_PB_SVrefine2Falcon1Dovetail_10430:HG4_PB_SVrefine2PBcRDovetail_8411:HG4_Ill_GATKHCSBGrefine_11418:HG3_PB_SVrefine2PBcRDovetail_8146:HG2_PB_SVrefine2PBcRplusDovetail_4453:HG2_PB_SVrefine2PB10Xhap12_12245:HG2_PB_SVrefine2Falcon2Bionano_8286:HG2_PB_SVrefine2Falcon1plusDovetail_4858:HG2_Ill_GATKHCSBGrefine_11068:HG3_Ill_MetaSV_2137:HG3_PB_HySA_25376:HG2_PB_HySA_30675;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11068:HG2_PB_SVrefine2Falcon1plusDovetail_4858:HG2_PB_SVrefine2Falcon2Bionano_8286:HG2_PB_SVrefine2PB10Xhap12_12245:HG2_PB_SVrefine2PBcRplusDovetail_4453:HG3_PB_SVrefine2PBcRDovetail_8146:HG4_Ill_GATKHCSBGrefine_11418:HG4_PB_SVrefine2PBcRDovetail_8411;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0890008;ClusterMaxSizeDiff=0.0890008;ClusterMaxEditDist=0.195082;PBcalls=19;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=580;DistBack=-1;DistForward=7;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=17:57628942-57628950;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:28:0:19:./.:1:5:3:8:1/1:0:14:1/1:4:83:.:.:.
chr17	60807246	HG2_PB_SVrefine2Falcon2Bionano_8288	T	TTAAAAAACCATAAATCAGCCGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCATGAAGTCAGGGGTTCGAGACCAGCCTGACCAACATGGTGAAGCCCCGTCTCTAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5242:HG4_PB_pbsv_16769:HG2_PB_PB10Xdip_13529:HG3_PB_pbsv_16524:HG4_Ill_250bpfermikitraw_21902:HG2_PB_pbsv_16867:HG3_Ill_MetaSV_2140:HG3_Ill_250bpfermikitraw_21611:HG2_Ill_250bpfermikitraw_22264:HG3_PB_HySA_25397:HG4_PB_HySA_24542:HG4_PB_SVrefine2PBcRDovetail_8415:HG4_PB_SVrefine2Falcon1Dovetail_10433:HG4_Ill_SVrefine2DISCOVARDovetail_11775:HG3_PB_SVrefine2PBcRDovetail_8150:HG3_PB_SVrefine2Falcon1Dovetail_10409:HG3_Ill_SVrefine2DISCOVARDovetail_12021:HG2_PB_SVrefine2PBcRplusDovetail_4458:HG2_PB_SVrefine2PB10Xhap12_12249:HG2_PB_SVrefine2Falcon2Bionano_8288:HG2_PB_SVrefine2Falcon1plusDovetail_4860;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5242:HG4_PB_SVrefine2PBcRDovetail_8415:HG4_PB_SVrefine2Falcon1Dovetail_10433:HG4_Ill_SVrefine2DISCOVARDovetail_11775:HG3_PB_SVrefine2PBcRDovetail_8150:HG3_PB_SVrefine2Falcon1Dovetail_10409:HG3_Ill_SVrefine2DISCOVARDovetail_12021:HG2_PB_SVrefine2PBcRplusDovetail_4458:HG2_PB_SVrefine2PB10Xhap12_12249:HG2_PB_SVrefine2Falcon2Bionano_8288:HG2_PB_SVrefine2Falcon1plusDovetail_4860;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0938628;ClusterMaxSizeDiff=0.0794224;ClusterMaxEditDist=0.284698;PBcalls=14;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=133;DistBack=68368;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=184;REFWIDENED=17:60807247-60807430;PctSeqSimilarity=0.9709;PctSizeSimilarity=1;PctRecOverlap=0.7143;SizeDiff=0;StartDistance=-38;EndDistance=-38;GTMatch=0;TruScore=89;MatchId=2264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:2:57:./.:0:5:0:4:./.:2:3:1:3:0/1:11:10:./.:.:.:.:.:.
chr17	61074162	HG3_PB_SVrefine2Falcon1Dovetail_10411	A	ATTTTCTTTTCTTTTTCTTTGTTTTTTTTTGAGATGGAGTTCCGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTGGGTTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCTTGCCTCAGCCTCCCAAGTAGCTGCGATTACAAGTGCGCACCACCACGTCTGGCTAATTTTTTGTATTTTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8289:HG3_PB_HySA_25399:HG3_PB_pbsv_16526:HG2_PB_pbsv_16869:HG2_Ill_breakscan11_4738:HG3_PB_SVrefine2PBcRDovetail_8152:HG4_PB_SVrefine2Falcon1Dovetail_10434:HG3_PB_SVrefine2Falcon1Dovetail_10411;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10411:HG4_PB_SVrefine2Falcon1Dovetail_10434;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0497512;ClusterMaxEditDist=0.257426;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=195;DistBack=-188;DistForward=47613;DistMin=-188;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=193;REFWIDENED=17:61074163-61074355;PctSeqSimilarity=0.9529;PctSizeSimilarity=0.975;PctRecOverlap=0.1244;SizeDiff=-5;StartDistance=-173;EndDistance=-173;GTMatch=0;TruScore=68;MatchId=2265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:0|1:29:3:1:17:./.:1:0:0:3:0/1:7:4:./.:.:.:.:.:.
chr17	64637274	HG2_PB_HySA_30723	C	CAAAAAAACAACAGTAAATATCGAAGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACAGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAAAAACCTACAAGCACAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACCTGGAAAGGAACAACCGGTACCAGCCGCTGCAAAACCATGCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGGCAATTGGATAAAGAGTCAAGACCATCAGTGTGCTGTATTCAGGAAACCATCTCACGTGCAGAGACAACACATAGGCTCAAATAAAAGGATGGAGGAAGATCTACAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCCACTGTCAACATTAGACAGATCAAACGAGACAGAAAGTCAACAAGGATACCAGAATTGAACTCAGCCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACAATTTTTTTCAGCACAACAACAACACCTATTCCAAAATTGAACCACATATTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCCAGGATTAAGAATCTCATCAAAGCCGCTCAACTACATGGAAAACTGAACAACCTGCTCCTGAATGACTACTGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTGAAACCACGAGAAAAAAACACCACATACCAAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGGAAATTTATAGCACTAAATGCCTACAAGAGAAACAGGAAAGATCCAAAATTGACACCACTAACATCACAATTAAAAAACTAGAAAAGCAAGAGCAAACACATTCAAAAAGCTAGCAGAAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGAAAATAAGAGACAAAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAAGAGAGAAGAATCAAAATAGACACATACAAAAAATGATAAAGGGGATAACTCACCCCACCGATATCCCCCACAGAAATACAAACTAACCATCAGAGAATACTACAAACCCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCAGACTAACCAGGAAGAAGTTGAATCTTCTGAAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCATAGAAAAAAAGAGGGAATCTCCCTAACTCATTTTATGAGGCCAGCCATTATTCTGATACAAAGCCGGGCAGAGACACAACCAAAAAAAGAATTTTGACACAATACCTTGATGAACATTGATCGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCAGCAGCACATCAAAAAGCTTATCCACATGACAAGTGGGCTTCATCCCTGGATCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGACCAAAAGACAAAACCCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATCAACAACCCTTCATGCTAAAAACTCTCAATAAATAGGTATATGATGGGAACGTATTTCAAAAATATAAGAGCTATCTTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAAGGATGCCCTCTCTCACCGCTCCTATTTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAAATAAAGGGATTTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTAATCTAAAAAACCCCATCGTCTCAGCCCAAAATCTCCTAAGCTGATAAGCAACTTCAGCAAAGTCCTCAGGATACAAATCAAGTACAAAAACACAAGCATTCTTATACACCAACAACAGAACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAAGGACCTCTTTCAAAGAGAACTACAAACAATGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCCAATGCCATCCCATCAAGCTACAAACAATGACTTTCTTCACAGAATTTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTAAGCTGTACCAAAACAGAGATATAGATCAATGGAACACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGAACAAACCTGAGAAAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAAGCTGAAACTGGATCCCTTCCCTTACACCTATAACAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAACACATAAAAACCTAGAAGAAAACCTAGGCATTACCATTCAGACATAGGCGTGGGCAAGGACTTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAAATTGACAAATGGATCTAATTAAACTAAAGAGCTTCCTGCACAGCAAAAGAAACTACCATCAGAGTGAAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACCAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACACTTATGAGATATCATCTCACACCAGTTAGAAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTAACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTTATAAATCAGCTGCTATAAAGACACATGCACAACGTATGTTTATTGCGGCACTATTCACAAAAGCAAAGACTTGGAACCAACACCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCATAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGGATGAAATTGGAAACCATCATTCTCAGTAAACTACGCAAGAACAACAAAACAAACACCGCATATTCTCACCATAGGTGGGAATTGAAACAATGAGACACATGGACCCAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGAAGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGAACACATTAGTGGGTGCAGTGCACCAGATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTATACCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTCAAAAAATACAAGGAAATTAATATATTCTCAGAACTTAGTTGATTGCTCATTTCAATGTTACCAAAGTATTCGCTACTATAACAACTTTGCCTGACAAATGGTGTCCATGACCTGTGTTATTTTCAGCCCCAGCATGTGTACCTGTGTAACAAGAATCCTCTCTCCATGCTTGACCAATATTCCTGGTTATAGCCATCTCTCTAGTTTTGTGGACTTTTTCACTGTTCTACAGTCACATGCTGCTGCGTAATTTCATTATGTGTCTCTGTTTTTTCTCTGATGCTCTCTCTCCCCATTGATCCCCACATTCCCAACCTCCATGTCCTCCTCTCCAACCCTCCAGAACCACCTGGCTACTTCTGCCTCTGTCCCGCCTTCCTCCAGTAATCCCCAGTGCAATAAAACAAAGATTAGACCACTGTGAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_30723:HG2_PB_PB10Xdip_13565:HG2_PB_assemblyticsfalcon_10881:HG2_PB_SVrefine2PB10Xhap12_12260:HG4_PB_SVrefine2PBcRDovetail_8429:HG3_PB_SVrefine2Falcon1Dovetail_10422;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_30723;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0125719;ClusterMaxSizeDiff=0.0125719;ClusterMaxEditDist=0.0401686;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=6553;DistBack=50025;DistForward=35918;DistMin=35918;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=17:64637275-64637294;PctSeqSimilarity=0.9844;PctSizeSimilarity=0.9971;PctRecOverlap=0.9973;SizeDiff=19;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:32:0|1:37:0:0:27:./.:2:10:18:0:0/1:23:9:0/1:220:288:.:6534:.
chr17	65546557	HG2_PB_SVrefine2Falcon2Bionano_8299	G	GAAAAGACAGGCAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTCGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_16882:HG2_PB_assemblyticsfalcon_10886:HG4_PB_pbsv_16785:HG3_PB_pbsv_16544:HG2_PB_assemblyticsPBcR_10507:HG3_PB_HySA_25429:HG3_PB_assemblyticsfalcon_10859:HG4_PB_assemblyticsfalcon_10660:HG2_PB_HySA_30729:HG2_PB_SVrefine2Falcon1plusDovetail_4873:HG2_PB_SVrefine2PB10Xhap12_12264:HG2_PB_SVrefine2Falcon2Bionano_8299:HG2_PB_SVrefine2PBcRplusDovetail_4470:HG2_10X_SVrefine210Xhap12_11708:HG3_PB_SVrefine2Falcon1Dovetail_10426:HG4_PB_SVrefine2Falcon1Dovetail_10444:HG2_Ill_breakscan11_4740:HG2_PB_PB10Xdip_13588;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8299:HG2_PB_SVrefine2PB10Xhap12_12264;NumExactMatchSVs=2;ClusterMaxShiftDist=0.193448;ClusterMaxSizeDiff=0.190328;ClusterMaxEditDist=0.256651;PBcalls=16;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=337;DistBack=-1;DistForward=14472;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=17:65546558-65546572;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.9941;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2268.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:77:./.:0:3:0:0:./.:0:9:0:2:1/1:0:32:1/1:2:44:.:.:.
chr17	66001859	HG2_PB_SVrefine2PBcRplusDovetail_4473	G	GGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATCACTTGAGGTCAGGAGTTGTAGACCAGCCTGACCATCATGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCAGGCATGCTGGCGCATGCCTATAATCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGATTGCGGTGAGCTGAGATCGCACCATTGCACTCCAGCCTGGGCAACAAGAGGGAAACTCTGTCTCTATCTTTTGTTGTTGTTGTTTTGAGACGGAGTTTCCCTCTTGTCACCCAAGCTGGAGTGCAATGGCACGATCTTCACTCGCCCCAACCTCTGCCACCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCATAGTAGATGGGATTACAGGCGCGTGCCACCACGCCCGGCTAATTTTGTATTTTTAGGAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGATCGGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCAGGAAACTCTGTCTCTAAATAAATAAATAAATAAATAAGGCCGGGCACA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10429:HG2_PB_pbsv_16884:HG4_PB_pbsv_16787:HG3_PB_pbsv_16546:HG4_PB_HySA_24581:HG2_PB_HySA_30733:HG4_Ill_MetaSV_2071:HG4_Ill_GATKHCSBGrefine_11437:HG3_Ill_MetaSV_2151:HG2_Ill_MetaSV_2011:HG2_Ill_GATKHCSBGrefine_11083:HG2_PB_PB10Xdip_13590:HG4_PB_SVrefine2Falcon1Dovetail_10446:HG4_PB_SVrefine2PBcRDovetail_8435:HG4_Ill_SVrefine2DISCOVARDovetail_11806:HG3_Ill_SVrefine2DISCOVARDovetail_12052:HG2_PB_SVrefine2PBcRplusDovetail_4473:HG2_PB_SVrefine2PB10Xhap12_12268:HG2_PB_SVrefine2Falcon2Bionano_8300:HG2_PB_SVrefine2Falcon1plusDovetail_4875:HG2_Ill_SVrefine2DISCOVARplusDovetail_5273:HG2_10X_SVrefine210Xhap12_11714:HG3_PB_SVrefine2PBcRDovetail_8164;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11714:HG2_Ill_SVrefine2DISCOVARplusDovetail_5273:HG2_PB_SVrefine2Falcon1plusDovetail_4875:HG2_PB_SVrefine2Falcon2Bionano_8300:HG2_PB_SVrefine2PB10Xhap12_12268:HG2_PB_SVrefine2PBcRplusDovetail_4473:HG3_Ill_SVrefine2DISCOVARDovetail_12052:HG4_Ill_SVrefine2DISCOVARDovetail_11806:HG4_PB_SVrefine2PBcRDovetail_8435;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0647198;ClusterMaxSizeDiff=0.0615627;ClusterMaxEditDist=0.185358;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=623;DistBack=4870;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=253;REFWIDENED=17:66001860-66002112;PctSeqSimilarity=0.9751;PctSizeSimilarity=0.9856;PctRecOverlap=0.7319;SizeDiff=9;StartDistance=-163;EndDistance=-163;GTMatch=0;TruScore=89;MatchId=2269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:1/1:0:39:1:7:./.:0:0:0:3:1/1:0:15:1/1:3:71:.:.:.
chr17	66427861	HG3_Ill_SVrefine2DISCOVARDovetail_12054	A	AGAGGCACGTGTGAGCCGTAACCGCCGGGGACATATGAACACCCGTGGGCAGGCTGAGGGGAGGCCCAAGAGAGCCATAACTGCTGGGGACATATGAACGCCCCGTGGACAGGCTGAGGGGAGGCCCATGTGAACCATAACTGCTGGGGACACATGAACACCCTGTGGACAGGCTGAGGGGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11716:HG4_PB_pbsv_16791:HG3_PB_pbsv_16550:HG2_PB_PB10Xdip_13604:HG4_Ill_MetaSV_2073:HG2_Ill_MetaSV_2014:HG3_Ill_manta_3705:HG3_Ill_MetaSV_2153:HG4_Ill_manta_3848:HG4_Ill_GATKHCSBGrefine_11441:HG3_Ill_Spiral_17264:HG3_Ill_GATKHCSBGrefine_11020:HG4_PB_HySA_24594:HG2_PB_SVrefine2Falcon1plusDovetail_4878:HG2_PB_pbsv_16888:HG3_PB_HySA_25436:HG4_PB_SVrefine2Falcon1Dovetail_10450:HG4_Ill_SVrefine2DISCOVARDovetail_11808:HG3_PB_SVrefine2PBcRDovetail_8166:HG3_PB_SVrefine2Falcon1Dovetail_10432:HG4_PB_SVrefine2PBcRDovetail_8436:HG3_Ill_SVrefine2DISCOVARDovetail_12054:HG2_PB_SVrefine2PBcRplusDovetail_4476:HG2_PB_SVrefine2PB10Xhap12_12271:HG2_PB_SVrefine2Falcon2Bionano_8303:HG2_Ill_SVrefine2DISCOVARplusDovetail_5276;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11716:HG4_PB_SVrefine2PBcRDovetail_8436:HG3_Ill_SVrefine2DISCOVARDovetail_12054:HG2_PB_SVrefine2PBcRplusDovetail_4476:HG2_PB_SVrefine2PB10Xhap12_12271:HG2_PB_SVrefine2Falcon2Bionano_8303:HG2_Ill_SVrefine2DISCOVARplusDovetail_5276;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0965147;ClusterMaxSizeDiff=0.0911528;ClusterMaxEditDist=0.221053;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=181;DistBack=79600;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=62;REFWIDENED=17:66427862-66427923;PctSeqSimilarity=0.9933;PctSizeSimilarity=1;PctRecOverlap=0.7624;SizeDiff=0;StartDistance=-43;EndDistance=-43;GTMatch=0;TruScore=91;MatchId=2270.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:0:19:0:15:1/1:1:20:1:29:1/1:0:21:./.:.:.:.:.:.
chr17	69443677	HG2_Ill_SpiralSDKrefine_6924	T	TATATATATATATATATATATATATATATATATATATATATATATATAGAATATATATATATATATATATAGAATATATATATATATATATATATAGA	20	PASS	ClusterIDs=HG2_PB_HySA_30771:HG2_PB_assemblyticsfalcon_10927:HG2_PB_SVrefine2Falcon1plusDovetail_4887:HG2_PB_HySA_30773:HG4_Ill_SVrefine2DISCOVARDovetail_11824:HG2_PB_pbsv_16900:HG4_PB_pbsv_16802:HG4_Ill_GATKHCSBGrefine_11449:HG2_Ill_SpiralSDKrefine_6924:HG2_Ill_GATKHCSBGrefine_11093;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11093:HG2_Ill_SpiralSDKrefine_6924:HG4_Ill_GATKHCSBGrefine_11449:HG4_Ill_SVrefine2DISCOVARDovetail_11824;NumExactMatchSVs=4;ClusterMaxShiftDist=0.164948;ClusterMaxSizeDiff=0.164948;ClusterMaxEditDist=0.228261;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=97;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=41;REFWIDENED=17:69443678-69443718;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2272.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:43:./.:16:25:13:6:./.:0:4:10:3:0/1:21:10:./.:.:.:.:.:.
chr17	70697998	HG4_PB_SVrefine2PBcRDovetail_8451	G	GGGAAGCTGAGGTGGAAGGACTGTTTGAGCCCAGAAGTTAAGTTTGAGACCAGCCTGGGTGATATAAAGAGACCCCATCTCTATAGAATGTTTAAAAATTAGCCAGCTGTGGTGGTGCCTGCCTGTAGTCCTGGCTAATCA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5291:HG3_PB_pbsv_16574:HG2_PB_PB10Xdip_13617:HG2_PB_pbsv_16910:HG4_PB_HySA_24621:HG2_10X_SVrefine210Xhap12_11734:HG4_PB_pbsv_16811:HG3_PB_HySA_25471:HG2_PB_HySA_30794:HG4_PB_SVrefine2PBcRDovetail_8451:HG4_PB_SVrefine2Falcon1Dovetail_10464:HG4_Ill_SVrefine2DISCOVARDovetail_11833:HG3_PB_SVrefine2PBcRDovetail_8179:HG3_PB_SVrefine2Falcon1Dovetail_10448:HG2_PB_SVrefine2PBcRplusDovetail_4485:HG2_PB_SVrefine2PB10Xhap12_12285:HG2_PB_SVrefine2Falcon2Bionano_8319:HG2_PB_SVrefine2Falcon1plusDovetail_4892;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5291:HG4_PB_SVrefine2PBcRDovetail_8451:HG4_PB_SVrefine2Falcon1Dovetail_10464:HG4_Ill_SVrefine2DISCOVARDovetail_11833:HG3_PB_SVrefine2PBcRDovetail_8179:HG3_PB_SVrefine2Falcon1Dovetail_10448:HG2_PB_SVrefine2PBcRplusDovetail_4485:HG2_PB_SVrefine2PB10Xhap12_12285:HG2_PB_SVrefine2Falcon2Bionano_8319:HG2_PB_SVrefine2Falcon1plusDovetail_4892;NumExactMatchSVs=10;ClusterMaxShiftDist=0.121212;ClusterMaxSizeDiff=0.0887372;ClusterMaxEditDist=0.268966;PBcalls=15;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=140;DistBack=-140;DistForward=27569;DistMin=-140;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=154;REFWIDENED=17:70697999-70698152;PctSeqSimilarity=0.9966;PctSizeSimilarity=1;PctRecOverlap=0.9716;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=2275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:1:19:0:35:1/1:1:16:1:10:0/1:4:24:./.:.:.:.:.:.
chr17	70855894	HG3_Ill_SVrefine2DISCOVARDovetail_12076	A	AAGGCTGGCGGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAGCTACAAAAACTTAGCCAGGCATGGTGGCACACGCCTATAGTCCCAGCTTCTTGGGAGGCTGAGGCAGGAGAATTGCCTGAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCATGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCCTCTCAAAAAAATAAAAATAAAAATAAATATGTATATATTATGTTTAGTTCCTAACCTTTAAGCAGAGAAGCATCTGAAGTTTAGGTGATGTGATCATGAACTTATTTATATACTTTTTAACTATAATAGATATTTCCATTTATCACGCTGATAATCACAAGCCACGTGATTATCAGAAGGTCAAACACTGCCTGTGTAAGGAGGCTGATTCAATTGTAGTCAGTACATGTTTTCCCAGGCACAGAAAGTCATCTATGTCTTACCTCTGATGCTTATGAATAAGCAATTGCTTAGTGACAACACAGATACAAATAGATCTGCATAACTATAACTAGTGAAAATTAAATGCACACCAGAAAAGAAACTGGGTTCACTGTTTGCTAAAGATTTCTCATCCATTAAGCAGACCACCCACTTCAACGTTCCTTGTTCCAAGTATCTAAGTAAGATAATTTCTACTCTCAGGTGACAGAGCCAAAATGTCTAATAATATTAAAAGTCCACCTACCAGGTGAGCTCTTCTACTTCATAAAGGCACAAACAACCATTTCATGAGCATGAGCTCACTCCCAATGAATTAATTTTGGTCTAAAAACAAATCCCACACGGGCTCCAGAGTCACCTCTCCACTCCTTCTCAGCTCACCCTGAACATGCATGGTCAGTGCAAATGCCCCGTGGGAGGGAGGCCATCATAGCTTCCGCAGGGTCCACCAGCAAAGGACATTTGCTTAAAAAAAAAAAAAAAAAAAAAAAAAGTCCCAGCACAATTACTGGAGAAAGCGTATTTTGGAGAACATCAATACTTACAAGAGCTTTGCAGTGGACTCCCAACCTCCCCATGGTCAACTTACATGGTTGTCAATTACCAGGTCAACGAGGAGGTGGACAAGAGAATAGTACCTACTTCAGGGCTCCTGTTCAACTGATAACATTAACTTAATTGTCATGTGGCTCACTTTGCCCTTGAGGTACTGCTGCTCTGTCATCTCTAGTTCTAAGAATAAGGGTGAACAGCTTTGACTGCTGCATCTCCAAGTGTTGGGTGAAGACCACCTGGTGCAGTGTTACAGTGGGAGCTCCCAAAACACCGACTCCTGGACCCACCCTGGAGCTACTAGAGTCTTTTGGAGACAGACTCAGGAATCTGCATTGTTCAAGCCATATCCCTCCCAATCCACACTCATCCCATGATGATTCTGATACAAACTAAGTTTTGAACATCAACGTTTTAGACTGCCCAACTACAAGTTAGTCCAGGTACCTCCTCTGAACCTAAACAGACTTCAGTCCAACTATTACTGTCCCATTAGGTGTCTCAGGGTAATGAACAGGGATATACTTGATTCTTAGTTATATTATTTATATCTGGACACCGAAGGATACATGTGCTTCTGTTTCAAAGACACAGAGGGGACAGCAAAGGAATTTAAGACTAGAAGGTGGGAACGAATTGAATTGCCCTGACAGAAACCATTTTCTTATATCAAATAAAAATCTTCTCTCCCTCTTTTTTTTTAAAAAAAAAAAGAGAATATGGGCTATCACAATTCGGACAGACAAGCAAATGCAACCACAGCAGATGAGGTGACAGAAAAATAAATTCCCCCAAACCAAGGAATTCTTGCATCTTCCCTGAGGCTATGTCTCAAACACATCTCTCGAGTTATACAATTTCCCACTTCCTCTCTTGTCCTAGGAGTTGGTCGCCAGAAATCAAAACATGACAATATTCACGAAAACTGTTAGTTGCTACAATCGAGACAGTATACACATTGCCAGTATTTGCAAATAGTATTCTATTCTGTAAACTACACCAAAAACGAGAATCTTTCGTCAAAGGTCACATAAGTGAAGGGAAAATGCGGAACTAAAACGGCTTAAATCGCACTAACATTTCATAGACATTTCTTGATGTCTGGGTTTTCTGGCTTTTCAGGATGTAAAAAACTGATGCCAAACAAAGGATCATCACTGGAGAGGACGACGGAAAAAGAAAAAGACGAGCACATGCCTGGAAATGTAGGTTTTGCTGCTTGTCTTTGTTACAAGAAGGCCAGGAAAGCTGAGGTTTTACCTGGGCGAGTTTACCAGCTACTCATCCATTAGAAGGGTCCTGAGGGACTCAAGGGGCGCTTCCCCTCTTGAAGCTGCAGATTCCATTTGGGAACCCAGGCAGGGACAAGGAAGACCAGGGCTTCTTGTTCCACAGACAAAATGCCACGACAACAGCCTTGGGGCAGCACCTCTGTCCCCGGTGCTGGACATCAAATGCCTCAGCTTAGGTTATTGACACAATGCTGGCCCCCTGCTGGCAGCCCCATCTATTAAGTCCATCTGACTGGCCAAGCCAAGGTCACCTGTGGCTGGGAGAGGACCCAAGAAAGGGAAGGTCTGAAGTCTGAAATCCAACTTTGGTGGGTTTTTTTGGTGGTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTATGTTACCCAGGCTGGCGTGCAATCATCTTGGCTCACAGCAACCTCTGCCTCCAGAGTTCAAACGATTCTCCTGCCTTAGCCTCCTGAGTAGTTGGGATTACAGGTGCACAGCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCGTCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCCGGTGATCCACCCGCCTTGGCCTCCTAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCCAGCCTGAAATCCAACTTCTATCCTGAAAGGCAGGTCTGCCTTCCACCAAGACCCACAAGGTGGGGAGAAGAAGAGATTCCCCAACATAGCCAAGGGATGTGGGTGCTAAGCAGCCAGAGGAGGAAAAGGGGAGGGAGAAGGAAGGAAGGAGCAGGGGAAAAGCCACCCTTGGGAAGCCTTATTCATGTATTTCGCCATTTACGCCTTCAGTATTCTAGACTCCATCAAATTTACCCCAGCTCTTCCACTCCCTTTAGAAAGACACAGATGAATGGAATCCACTGCATAGAATCCACTGCATAGAATCCATGGGCCAATTCTATCTCCAGTTTTCTGCGTGAAACCCTAGCAATGGTTGCAACCCCTAAAGGTCTTAGCTGCTTCCATCCGTAAAGGAGCCAAATTAGATAGACTTCAGGGCCACTTCTAGCGTAAACACTCCCCCTTTCCAGGGCAGCAATAGCCTCTGACTCAGCCCGCCTAAATGATCACTCATCCCCTGTGAGTTGGAGAGAACAGGTATTTCCAGTGCCAGTGCTTCTAGAATTCTGCTCTAACCCAAGAAATTCCCCAAGATGAGCTTCAAGGACAGCACATTCCAACTGCTCATAAAATAAGAATGTCCACTAAATGAGGAGCAAATGATTTGCCCAGAGGAAGTGGTGTCTCATTGTGCCCTAAAATTTTTTTAAAAGATTTTCTCTTAAGATTTATTAAAATATTTTGTTAATACAGAAATTCCCATACATTAGAGAAAATTTAGAAAATAAGCACGATAAAGGACTAAAAATCATTCATCACCCAGAGGCGACAGCCTTTAAAAAATTCTTAATCTTGGCCAGGTCCTTTATCGTGCTTCCACCTGGCCAAGATTAAGAATTTTTTAAAGGCTGTCGCCTCTGGGTGATGAATGATTTTTAGTCCTTTATCGTGCTTATTTTGGGAGGCCAAAGCGGGCGATCACCTTGGAGGTCAGGAGTTCGACACCAGCCTGACCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAAGTAGCCGGGCGTGGTGGCGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCTCAGATCACGCCATTGCACTCCAGCCTGGGCAACAACAGCAAAACTCTGTCTCAAAAAAAAAAAAACCCTTAATATTTTTATATTTATACTGGATATGCCCACATAGAGATGAACACATATACATCCACACACATACACATTTTTTCAGCTGAATTTTGAAGCATAATTTTCCATAGCATTAAAACATGAACATATTGCATATCATTAAATATTCTCCTCTATCAGTGGTTCTCAACCACATTTCCTTTAGCTATTAGAGGTCAAGATGGGCAAAGCGCAGAATTTCCAGTAGCCAAACAGAGAACTAAGAATATGTACTCAAGGTTTGTTTTTGTTTGTTTGTTTGTTTTTCTGTTAGAAAAAAAGATGTGGCTGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGACCACTAGCGGTCAGGGTTCAAGACTAGCCTGGCCAACGTGGCAAAACTCCCCCTCTACCAAAAATGCAAAAATTAGCCAGGTGTGGTGACGCATGCCTGTAATCCCAGCTACTTGGAAGGCTGAGGCAGGAGAATCCCTTGAACCTGGGAGGTGGAGATTGCAGTGAGCCGAGACTGCGCCACTATACCCCAGCCTCGGCAACAGATTGAGACTCCGTCTCAAAAAAAGAAAAAAAAAAAGGTGTGTTCGTTGCTCAAATTACTTCAAAGTCAGGCACATCCAGTTATCTTCCAGGCCTCTAGAAAGCTTTGGTGCTTAGGATAATAAAAGTGAGCTGGACAGGAATTATAAATCACCACTTAAAAAATTGGCGGAATGTTAGTTGAACTTCAAAGGGCCAATGCATCCTACTCTGAGACATCTGTGGTATAAATGTTATCTTCATGAGTGGTCTCTGATTATTTCTTCAAGCTCAGCTTAAATAATATAGCAGAAAGAACATGTGTATGAAGTGGGAAGCTATATTTTGGCAGCCTGATTTTCCATTGTATTTCCCATTTTCAAGTACATCATTTATCTGTCATCTGCTTCTGGGCCCACCACCTCTCATGTCCATAAACTGCATGAAGAAGTACCTGGGCCTGCATTGCTCACAACCACAGCTACAGTATCTAGCACAGTGCCTGGCACATAGTAGGTACTCAGATATTGTAATTCATTGGAAATGTATTAGGAAAGCCAACGGATGTTCTTTCCTGAAAAAAATGTCCACGCACACCTACACAGAACATTTTGCACATCTTTTAAAGAGTTGATAAACTTTTTTAAGGCTAAGAACCTCACTCCACAATATCCCATCTTATTGATAGACCAATATTGATTTATCCAAAGGCCTATTTTACAAACATAGAGATCAAGGGCTGGCAAACTCTCTTGGTAAGGGTCCAGATAGAAAATATGTTAGATTTTGTGGGTCGGCTTTGTTGCAACTACTCAACTCTGCCAGTGTCACCCAAAGGCAGCTGCAAACAATGGGTCAATGAGCTGGTGTGTCTGTATTCCAATAAAACTTTATTTATTAACACAAAATCAGGCAGCAAGCCAGATGTGGTCTGCAAATTATACTTTGCTGATCCCGGATATAGACTAATAAAAGCAGGACTTTCAAGATGCTTTAAGACTCAGATCTTTTGGTGATCAATGATCCACAGAGAATTTATCTAGAGCCTTTCTGTTTCCCGAAGAACTGAATTGCCTAGGCCCACCCAAGGACCAGCCTTCCACAAGGAGGATCAGAGACAATCCTTGTCTGGAGGAGAGAGTGAAGGTCATTACGAAATATACTGTGTCACAGACAACCTGCAGTGGACAGATGCACCTGTATTCTTTAAAGGAGAAAATAATCCCTGTGTTAGTGTTACCTACAAGCCTAGGAAAGTGAAGCCATATCAAGGCTCTGAGGATCATTCACAGATTGGGTGGGGCTCATTTGTAATCAGCATGAGCTCTTAAGGAGTAATTAGCAAATCGTTGAGATGCACATAATTTACACATTATGTAAATGCAGCTAAATGATTTTCTCGAAAAGTTTGTTTTCTTAATCAGCTAATTATTTCACCAACAATATTTTCATACTATTAATCCACTCAAGAAACAACTCAGCGCAAAGGTAAACTTACCACAGTTAAGGAAAAAAAAAAAACAAACTACAAGAATGAGGTCCCAACTAAAGAAGAATGACAATTCTCTGAAACTGGGTTTTCTCCATGAAAAAGAACACAAGTCAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4487:HG2_PB_PB10Xdip_13619:HG4_PB_assemblyticsfalcon_10714:HG2_PB_assemblyticsfalcon_10944:HG2_PB_assemblyticsPBcR_10568:HG4_PB_SVrefine2Falcon1Dovetail_10465:HG3_PB_SVrefine2Falcon1Dovetail_10450:HG3_PB_SVrefine2PBcRDovetail_8180:HG2_PB_SVrefine2Falcon1plusDovetail_4893:HG2_Ill_SVrefine2DISCOVARplusDovetail_5293:HG3_Ill_SVrefine2DISCOVARDovetail_12076:HG2_PB_SVrefine2Falcon2Bionano_8321:HG4_Ill_SVrefine2DISCOVARDovetail_11834:HG4_PB_SVrefine2PBcRDovetail_8453:HG2_PB_SVrefine2PB10Xhap12_12287;NumClusterSVs=15;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_12076;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0771817;ClusterMaxSizeDiff=0.0771817;ClusterMaxEditDist=0.0825534;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=6351;DistBack=7550;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=227;REFWIDENED=17:70855895-70856121;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9997;PctRecOverlap=0.9806;SizeDiff=-2;StartDistance=-122;EndDistance=-122;GTMatch=0;TruScore=99;MatchId=2276.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:110:1/1:0:31:1:34:./.:0:5:0:1:1/1:0:19:1/1:0:543:.:14642:.
chr17	70877105	HG2_PB_PB10Xdip_13620	C	CACTGCGGCCGGCCCAGATAGGTGGCATTTTTAACTGAACTTGTGAACCCTGAAAAGAATTCTTTGCAAGCATGGAACCCAGTGAGCTCTAAGGGCTGCCTAGGATTTTTGTCAGCCTGAATCTGCCACATTGCTGGTCTCCAGACATCAGTGGCATCTGGGATGAGGGATGCTGGCAGGAGTTGGAGAGTTCCTGCTAAGTTCCAGCCACGCTGCCTACAAGAAGGCACAATTCCATCTGTGGTTTGTCACAGAGGACTTGGACCACTAAGCCCAGCCCTGCTAGAGCTCTTGACCCAACCTGTTGCCCCCATACTTAGATGATCAGTAGATTTTTAATAAGGGTACCAAACAATTCAATGGGGAAAGGAAAATCTTGATCTCCCACCCTCACACCACACACACAAGTTAATGCAAGATGTCTTACAGAGCTAAATTTAAGGTTAAAACTATACAGCATCTAGAAGAAAATATATAACAATCTCTTCACAACTTGAGAGCAGGCAAAGATTTCTTAGTGAAAACACAAAAGGTGTGAACCATGAAGGAACAACTTGATAAATTAAGCTTTATCAAAATTAAAAGTTTTTCTCATCAAAAGACACCATTAAAAACCGAAATGGCAAGCCACATATCGGTTTAAAAAAAATTCACAGCCAGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTAAGGCAGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCCATCTCTACTAAAAATACAAAAATTAGTTGGGCATGGTAGCACATGCCCGTAGTCCCAGCTACCTGGGAGGCTGACAGGAGAATGGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCTAAGATCGCACCACTGCGCTCCAGCCTGGGCAACAGACCGAGACTCCATCTCAAAAAAGAAAAAAAAAAAAATCACAATACGTATACCTGAAACAGGACTTGCATCCAGAATATATAAAGAACATCTACAAATCAATAATAAAAAGACAAATGACCTACTAAAAAGGGGGAAAAGAATTAGATGCTTCATAAAAGTATATATATACAAATGGACAATAACAACAACAAAATGTGCTGAACGTCTCAGTCCTCAGGAAAATATAAACAAAAACTAAAAGATACTATTTCTTACACGCTGGAATATACAATGGCTAAAGTGAACAAGACTGGCAACACCCAGTGTTGACAAGGATGTGAAACAAATGGAACTCTCACACGCTGCCGGTAGAAGTGTCAAATAGCACAACCACTTTGGAAGACTTTTTGACAGTTTCTTATAAAATATAAGAATCCTGCATCTGAGGATTCAGCAATTCTACTCTGAGGTATTTTCTAAAAACAAGTGAAAACATGTTTCCCCCAAAACCTTATAAACAAATGTCCACAGCAGCTTTATTCTTAAATAGTCCTACACTAAGCATGCAAGAATGCAGGAGGGCTTTGTGATCAATCCACTCATCCAGGAAGTGATTCAACAGAGACTGAGGAACAGAGAAACCTTCATAGCAGAAGCTGTGGTCACCAATGAGTGCATTTCTATAGGGCAAAACAGGCAGACAAGGATGCAAATATTATGAATCCCAAGCAAATAGAATTAACACAAATACATAATCTGGAGCTGGAGGAAAGGGGGCAGGAAAAAGTATATTTCTGCAGCAAGGACTCATTCCATAACACAGTTGACCCTTGAACAACACGGGTCTCAACTGTGGGTGGGAGGTCCACTTATACACGGATTTTCTTCTGCCTCTACCACCCTTGAGACAGCAAGAGCAGCCCCTTCTCCTCCTCAGCCTACTCAATGAGAAGACTGGCCAGGTGTGGTGGCTCATGCCTGTAATCCCAACACTTTCGGAGGCCAAGGCGAGCGGATCACCTAAGGTCAGGAGTTTGAGACCGGACTGCCCAATACAGTAAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGTGTGGTGACACACACGTGTGATCCCAGCTACTCAGGAGGCAAGGCAGGAGAATTGCTTGAACCCAGGAGGGGGAGGTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTTGGCAACAGAGTGAGACTCTGTCTCAAAAAAAAGATGATGAGCATGAAGACTTTCATGATCCACTTCCACTTAATGAACAGTAAATATGTTTTCTCTTATGACGTTCTTAATAACATTTTCTTTTCTCTAGCATACTTTATTGTAGGAATACAGTATGTAATACAACTAACATACAAAATATGTGTTAATCTACTGTTTATGTTAGCAGTAAGGCTTCTGGTCAACAGTAGGCTATTAGTAGTTAAGTTTTTGGGGGTCAAAAGTTACATGTGGATTTTTGTCTGTGCAGAGGTTTGGTGTCCCTAACCCCCATGTTGTTCAAGGGTCAACTGTATACAAAATTACTCTATATTGTTTAAGCATAACAACTCCAGCTTCTTCATGGTGTTCATACTATTTTTTCTTACCTTTAATGGTTCTTTTTTTGAATGAATATTTCTTTTGGTGAAGAGATATTTAAAGTTTAGCAATTTCTTTATATTTCAGATTCTTATGCTTTAGTTAAATTCAAGTAAAATCAAATTTAATACTTATTTTGTAAATCGCATGTAACTATGCAGAGGCAGATGTTGAGAACTGTGTCTTAAGAATGTTCATATGATTTCTGGGTCTGGAGGGGTGGCACTTGGGGAGATTTCTTGCCTTCTTCTCTGAACCCTCTATGTTGCTTAAATTTTATTTTAAAAAGCAGGCATTGTTTCTGTAAAATTAATCAAGTTGTAGTTTAAAAGAATAAAGTAGGTCTCTTTCAGGTCCTAATTCTGGCACCTTGTTCATTTCTTTCATGATAATCCTCACAAATTATAGGCAAAAGTGTATTTCCATGTGTTAATTTAATATCTGTTTCCACTACTACTCTGCAAGCCATAAGGGTGAGGTCAGGAAGTACATAGTGGACATATGACACATATTCTCTGAATAAATATCACAAAAGAAGGAAAGTTCTGGCCGTGCACGGTGGCTCACACCTGTAATTCCAGAACTTTGTGAGGCCAAGGTGGGTGGATCACCTGAGGTCAGGAGTATGAGACCAGCCTGACCAATATGCTGAAACCCCATCTCTACTAAAAATACAAAATTAGCTGGGCTTGGTGGCGGGCACTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAATCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGAGCAACAGAGCAAGACTCTATCTCAAAAAAACAAACAAAACACAAAAAAAGAAAGCAAGCTCTTTATAGAGTTAAAAAAAAAAAAATCAGCCAGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTTAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCGGTCTCTACTAAAAATAGAAAAATTAGCTGGGTGTAGGGGCAGGTGCCTGTAGTCCCAGCTACTAGGAAGGGTGAGGCAGGAGAATGGTGTGAACCTGAGAGGCAGAGCTTGCAGTGAGCTGAGATCCACAATTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCAAAAAACAAAACAAAACAAAACACCAACAACAACATAAATCAGCAAGATTGACCCTCTCTTTTTTTTTTTTTTTTTTTTGAGATAGACCCAAAATGACAGGATATTCTCGGAATTCAAAGACTGAACTTACAGAACCCCACAGGGCTTCATCTGTAGTCTTTCACTAGGAGACCCTGAGGGCAGCAGTGCTGTCACCTGATGCCTTCATACGCCTAGAGAAATGGAATACATTTTAGCTTAATGAGCTGCTTCTTCCAATAGTTTTATGTAGATAAATGAGAGAATGACTCACAGATCTTGATTCTTTCCGAAAACTGGTTCCTAAACAGTGCATGAGGCTCTATCATGATGGTTGATTGCGTGATCACAAGAATATTCCTCCAAAGCTAACGGAAATAATACCCACTTGAAAGTTGCAAACAAACCCGGATATAGCATCGGTGGAATTTCAAGGTAATATAAGGTTGAGGGGTTGGGGGTGAGGGGTGTCTCTGCTGTTCTTCCTGATCTTAGCCATTCTTTTTTTTGGAGACAGAGTCTCGCTCTGTCACCCAGGGTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCACCGCCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACCACAAACTGCTAATTTTTTGTATTTTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTGGTGATCCGCTTGCCTGGGCCGCCCAAAGTGCTGGGATTACAGGTGTGAGCCACAGTGCCCGGCCTAGTGATTCTTATTACTTCTTACTTCAAACGCTCTCTGCAATCGTTAATCCTCCATTCCCCTCTGCAAACAGGGTTACAGTCCTTTCTACTCTTCTTGAACAATGAATTTGTTATAAACATTCTTAGCATCTTAAGTGATCTGTACTGCTGCTCCTTAAATTTCTATTTGGAAGATAAATGGAGAATGCTAAATGTCAGCGTCTAAGTGGTTCTCTCATCTACCATAGAGAGCATGATGGTCCTGGGATTTAAAAAAGAAGAAATTCCTATTTCATGTATCAAGAGTTTCTGCTTTGGTTTTGGGTCTGTTAGTCTGACTCTTTGAAGCTTCGGAGCTGTTCCTATCTCTAAAATGGATCTTGAGAAGACTGGGACTAGTTTTTCATGACACCATGGGAGTTCTGAGATTGGAGGAGAGTTCCTAAGAAATATGAACTCTAATGAAACCAACCAATAGTGGCATCACTACTTCTGTGTTTATACCCTTGGTTCTGCTCATGCGGTTCACTGAGGCACTAAAGGAGCAAGTAATGCTTGACCTTTGCTGTGGAGGTCAAAGAAATCTTAAGATAAGAAAGGCTGCCTGAACCAACTTAAAAGGTCGAGGATTCTCTAGACAGGGGAATATTCAGGTTTAATAGGCAAGAAAATGTTTTTAAAATGAGGCATTCTTTACGGAACCACAAGTAGCCCCCTGTGGCTGGAATGCAGGGCGTGTAGGGGGAAAATTTTTAAAAGATGGAGTTACAAAGACAGGCAGGGGACAGATAATATAAGCTTTTTAGGTCATGTTAAGGACTTTGGGCTGTATCCTGCAATTGCTGGGATTTTGAACCTCTAAATAGAAAAATTACCACATTGATTCTGCAATTTTAGAAAGTTCACATTCATAGCAGTATGATGCTGCACTAGAGATAAAAAGTACATTAATCCTGAAATCCAATGGTATGTGCTTTGGAGCCTTCAATGCAACCAGAATAAAGTGAATTGGATATTTCTAGAATGATATTCACCACTAAGGATGAGTATTACGGAGAGAGATTCATTAAAAACATGTATGACATTCTCTCTTCATTTTCAAAATGTCAAAGATGACATCTGCCTCAACTCCAAACCTACTATTTGAAGATAAAACATACATATCACATACATTTCACATAATGAAAATGCAGGGAGTAGTACTGGGACTATCATTCAAATCAGCCTGGTATACGTTAATTAAAATCATAGAGCCCTCTGACCAACTATGTGATTATAACCTCATCTTCATCAATCTATGTTCCATAGAACGAAAGTTCTGTGAGATAAAAACAGATGAGAAAAACTGATTTTCATAAACAAGGATGTTTAGAAGCTTCTGTTTACAGCAAAGATGTAGCAACAGAGACTGGGTTTACCCTCCCACCTAAAACAACACAGACAAAATATGCATACAAAAATAACCATTTCAAGGCAGTGGGTGACAGGCAATAAGAGACAGTGCTCTCTGAGAGACAGAAAATAAATGAGGTAAGCTCTGTGATTGTTCCAGCTTGCTGCCTTGAGATAGTTTCCAGGTTGCAGAGCAAGGACAGGGGCATCAGGTGGAGCCCAGCAGACTCCCTGAGTGGAGGGGACAGAGCTGAAGGTCAGGGAGACCAAGGCACTCAGGGTACACAAGACAAAGTGCCAGAGAGGACAGTATTGCACAGAGACAGAAAGCCAGTTATGCAGAAGGCAGCCCTCGAGGATCCAACAGAGTACTTAGTGCACGCATGGGGGAAAACTCCCTGAGTTTGGGGAGAAACAGTTTGAAAGGATTCAGGGAAACAGGTCCAAGAACAGTGCCTACTCCTACCAGTCTGACGTTGGTTAGAGTACCCAGAAGGGTCTTGCCTAAGTAGAGGGGATTAACCAGCCCTAGACTCACCACAGCTCAAACTCCACCTAATCAATCTCAAAAGCAACCCAATGGGATAAAATTATTTCTAAGTAACTTAACTGTGTTGCAGAACAAAGCCCAAGAATATTCATAAAAATACAAAAATAAGCAAGGTAGGATTCACAATGTCTAGCATCCATTAAAAAATTAAAGGACATTCAAAGAAGCGAGAAAATTGAAACCATGGCGAGAAGAAGCAATAAAAACCAACTCAGAACTGACAGACGTTAGAACTGGAAGACAATATCATGAAAGCAGTTATTACAATGGTATTCCACATGTTCAAAATATTAGATACAGGAGTCACGAAAATGAATCACATTAATGCCCTAGATATAGAAAAAGGACACTCTCTGATATTTTAAAAATACACTAGAAAGTATGAATGGAAAACAATATATTGCAGAAGAAATTATCAGAGGACTTGAAAACACAGCAATAGACACGATCCCAAGTGAAACACAGAGAAAATAATTTTAAAAAATGAACAAAGCATCTGTGAGTTGTGGGACAACTTCAAGCAGCTTAATGCATAAGTATATGGAGTCAGAACAGTAGAAAACATATTTGAAAGAATAATGGCCAAATGTTTCCAAATCTGATGGAACCATTAAACCCACAGATCCATGAAGCCGAATAAACCCTAAGCACAAGAAACAGGAAACTTTACCAAGGTACACCATAATCAAATTGTTTGAAGCCAGTGACCAAGAGAAAATATTAAAAGTAGCCAGAGACAAAATAGATACATTCCATACATACATACGTTCCTTATGTACAGAGGAAGATAAATAAGGATGATGGCATATGAAAAGATGTTCAACATCATTAGTCAATGGGGAAATGCAAATTAAAACTAAATGGCTGTGGCTCATGCCTGTAATCTCAGTGCTTTGGAAGACTGAGGCAGGAGGATCACTTGAGACCAGAAGTTCAAGACTGTCCTGGGCAACATAGCAAGATCTCAACTCTACATCAAAAATTAGCTGGATGTGGTGGTGCCCACCTGAAGTCCCTTGGAAGACAACCTTGGAAGGTTGAGGTGGGAAGATCTCCTGAGCCTGGGAGGTCGAGGCTGCAGTGAGCTGTGATTGTGCTACTGCACTCAGCCTGGGCAACAGAGTGAGATCCTGTCTCAAAAAAAAAAAAAAAAAAGTAGCCAGGTATGGTGGTGCATGCCTGTAGTCCCAGCTACTTGTAAGGCTAAGGTGGGCGGATGGCTTGAGCTCAGGAGTTTCAGGCTGCAGTGAGCTATGATCACACCACTGCACTCCAGCCTGGGTGACAGAGGAAGACCCTGTCTATTAAATAACAAAACAAAACAAAACAAAACAATACACATACATACATACAAGGAAATACCATTATACACCCATTAAGATAATGTTTTTTTCTTTTTTGAGACAGAGTCTCACTCTGTTTCACCCAGGCTGGAGTGCAATGGCACAGTCTCAGCTCACTGCAGCCTCTAACTCCCAGGTTCAAGTGATTCTCCTGTCTCAGCCTCCCGAGTAGCTGGGTCTACAGTATGTGCCACCACACCCAGTAAATTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGATCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5294:HG2_PB_PB10Xdip_13620:HG2_PB_SVrefine2PB10Xhap12_12288:HG3_PB_SVrefine2PBcRDovetail_8181:HG2_PB_SVrefine2PBcRplusDovetail_4488;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_13620;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0022327;ClusterMaxSizeDiff=0.0022327;ClusterMaxEditDist=0.00992494;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=8067;DistBack=12347;DistForward=15225;DistMin=12347;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=116;REFWIDENED=17:70876990-70877105;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9996;PctRecOverlap=0.9978;SizeDiff=-3;StartDistance=16;EndDistance=16;GTMatch=0;TruScore=99;MatchId=2277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:60:0|1:36:0:0:19:./.:21:0:1:9:0/1:32:19:0/1:215:306:.:14642:.
chr17	70944309	HG2_PB_SVrefine2Falcon1plusDovetail_4894	C	CCAAAACTCCACTGCAAGCGTCATCGCCGCACACACACAAAACCCCACTGCAAGCGTCATCGCCTCACACACACAAAACCCCACTGCAAGCGTCATCGCCGCACACATACCAAACCCCACTGCAAGCGTCATCGCCGCACGCACA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4894:HG4_PB_assemblyticsfalcon_10715:HG4_PB_SVrefine2Falcon1Dovetail_10466:HG2_PB_pbsv_16911:HG4_PB_HySA_24623:HG3_PB_pbsv_16575:HG4_PB_pbsv_16813:HG2_PB_PB10Xdip_13627:HG2_PB_HySA_30795:HG3_PB_SVrefine2Falcon1Dovetail_10451:HG2_PB_SVrefine2PBcRplusDovetail_4489:HG2_PB_SVrefine2PB10Xhap12_12289:HG2_PB_SVrefine2Falcon2Bionano_8322;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4894:HG3_PB_SVrefine2Falcon1Dovetail_10451:HG2_PB_SVrefine2PBcRplusDovetail_4489:HG2_PB_SVrefine2PB10Xhap12_12289:HG2_PB_SVrefine2Falcon2Bionano_8322;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0866667;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.184211;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=144;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=238;REFWIDENED=17:70944312-70944549;PctSeqSimilarity=0.9863;PctSizeSimilarity=1;PctRecOverlap=0.2414;SizeDiff=0;StartDistance=-110;EndDistance=-110;GTMatch=0;TruScore=74;MatchId=2278.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:53:1/1:4:23:0:17:./.:2:1:2:0:./.:5:1:./.:.:.:.:.:.
chr17	71047737	HG3_Ill_SVrefine2DISCOVARDovetail_12080	C	CTGTAATCCCGGCACTTTGGGAGGCCGAGGCGGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCCGGCCAACATGGTGAAACCCTGTGTCTACAAAAAATACAAAAATTAGCCGGGTGTGGTGGCATGTGCCTATAATCCCAACTACTCAGGTGGCTGAGGCAGGAGAATCGCGTGAACCTGGAAGGTGGAGGTTGCAGTGAGTTGAGATAGCGCCACTGCACAGAGGTTGCAGTGAGTTGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCTATCTTAAAAAAAAAAAAAAAAAAAAAAAAAGAGTTCCGTGCTGAACCTGCCAGGTGTGAGGCGTCCATCCCAGCCAGCCAGCTGGAGATCTGGAAGAGAGGGGATGGCTGATGCTGTAGGCAGGGACAATGGTGAGGCAGCTACAATGACAACAGTGACTTGAGCTAGGGTGGGAGCCGCCTGCAGTGCATGAGAGGAGAGCGGCTGGAGGCATCAGAGGTACAGTCACACATGGGTGGTAGGCTTGGAGCAAACTGAATATAGGATAGGGGACAAGGGGAAGCTCAACTTTTTTTTTTTTTTTTTTGCGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGGGGCGCAAGCGCGATCTCGGCTCATTACAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGATTCGGCCTCCTGAGTAGCTGGGACTATAGGCGTGTGCCACCACGCACAGCTAATTTTTGTGTTTTCAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGCGATCTGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGTGCCCAGCCAGCTCAAGATTTTAAAGGGCTAACTTCAAAAGTCTCTGGTGAAAAAAATAATGTAAAAAGATAAACTGGCAAAAGGATGTAAACAAGCCAACTCATCACAAAGCGAAATGCCAGAGGGAGTCGGGTGCAGTGGCTCACACT	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_11836:HG2_PB_pbsv_16912:HG4_PB_HySA_24624:HG3_Ill_MetaSV_2160:HG2_PB_SVrefine2Falcon1plusDovetail_4896:HG2_Ill_MetaSV_2019:HG4_Ill_MetaSV_2078:HG4_Ill_GATKHCSBGrefine_11456:HG2_PB_PB10Xdip_13628:HG2_Ill_Spiral_1103:HG2_PB_SVrefine2Falcon1plusDovetail_4895:HG2_PB_SVrefine2PB10Xhap12_12290:HG2_10X_SVrefine210Xhap12_11736:HG3_PB_SVrefine2PBcRDovetail_8182:HG3_Ill_SVrefine2DISCOVARDovetail_12080:HG2_PB_SVrefine2PBcRplusDovetail_4490:HG3_PB_SVrefine2Falcon1Dovetail_10452:HG2_PB_SVrefine2Falcon2Bionano_8323:HG2_Ill_SVrefine2DISCOVARplusDovetail_5298:HG2_10X_SVrefine210Xhap12_11735:HG4_PB_SVrefine2PBcRDovetail_8455:HG4_PB_SVrefine2Falcon1Dovetail_10467;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_4490:HG3_Ill_SVrefine2DISCOVARDovetail_12080:HG3_PB_SVrefine2PBcRDovetail_8182;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0402685;ClusterMaxSizeDiff=0.0402685;ClusterMaxEditDist=0.138063;PBcalls=12;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=1025;DistBack=3585;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=223;REFWIDENED=17:71047738-71047960;PctSeqSimilarity=0.9852;PctSizeSimilarity=1;PctRecOverlap=0.8478;SizeDiff=0;StartDistance=-156;EndDistance=-156;GTMatch=1;TruScore=94;MatchId=2279.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:97:1/1:1:24:1:20:./.:0:5:0:1:1/1:0:27:0/1:18:124:.:1109:.
chr17	71265271	HG3_Ill_150bpfermikitraw_21125	T	TGTTCACTCATTCACTCACTCATTCACCCATTCACTCACTCATTCACTCACTC	20	PASS	ClusterIDs=HG3_Ill_150bpfermikitraw_21125:HG2_PB_pbsv_16914:HG3_Ill_GATKHC_26657:HG3_Ill_250bpfermikitraw_21703;NumClusterSVs=4;ExactMatchIDs=HG3_Ill_150bpfermikitraw_21125:HG3_Ill_GATKHC_26657:HG3_Ill_250bpfermikitraw_21703;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.148148;PBcalls=1;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=24572;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=104;REFWIDENED=17:71265270-71265376;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:14:0|1:20:6:2:8:./.:17:1:7:12:0/1:23:16:./.:.:.:.:.:.
chr17	71285858	HG4_Ill_GATKHCSBGrefine_11463	A	AAGGGAGGAAGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGG	20	PASS	ClusterIDs=HG4_PB_pbsv_16820:HG4_PB_HySA_24628:HG2_PB_pbsv_16915:HG4_Ill_svaba_20848:HG4_Ill_GATKHC_26753:HG4_Ill_GATKHCSBGrefine_11463:HG4_Ill_250bpfermikitraw_21994:HG2_Ill_svaba_20890:HG2_Ill_GATKHC_26812;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHC_26812:HG2_Ill_svaba_20890:HG4_Ill_250bpfermikitraw_21994:HG4_Ill_GATKHCSBGrefine_11463:HG4_Ill_GATKHC_26753:HG4_Ill_svaba_20848;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0175439;ClusterMaxSizeDiff=0.0173913;ClusterMaxEditDist=0.173913;PBcalls=3;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=20436;DistForward=26;DistMin=26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=72;REFWIDENED=17:71285855-71285926;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:./.:20:9:8:13:./.:4:8:3:9:0/1:11:10:./.:.:.:.:.:.
chr17	72195401	HG4_Ill_Krunchall_23037	G	GAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	20	PASS	ClusterIDs=HG2_PB_HySA_30822:HG2_PB_assemblyticsfalcon_10964:HG4_Ill_svaba_20857:HG4_Ill_Krunchall_23037:HG4_Ill_GATKHC_26766:HG4_Ill_GATKHCSBGrefine_11470:HG4_Ill_FB_14283:HG4_Ill_150bpfermikitraw_21205:HG2_Ill_svaba_20901:HG2_Ill_Krunchall_22729:HG2_Ill_GATKHC_26828:HG2_Ill_GATKHCSBGrefine_11105:HG2_Ill_FB_14434:HG2_Ill_250bpfermikitraw_22376:HG2_Ill_150bpfermikitraw_21095:HG4_PB_HySA_24641;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21095:HG2_Ill_250bpfermikitraw_22376:HG2_Ill_FB_14434:HG2_Ill_GATKHCSBGrefine_11105:HG2_Ill_GATKHC_26828:HG2_Ill_Krunchall_22729:HG2_Ill_svaba_20901:HG4_Ill_150bpfermikitraw_21205:HG4_Ill_FB_14283:HG4_Ill_GATKHCSBGrefine_11470:HG4_Ill_GATKHC_26766:HG4_Ill_Krunchall_23037:HG4_Ill_svaba_20857;NumExactMatchSVs=13;ClusterMaxShiftDist=0.10101;ClusterMaxSizeDiff=0.10101;ClusterMaxEditDist=0.181818;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=5;DistForward=50584;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=75;REFWIDENED=17:72195379-72195453;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2282.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:0|1:29:1:1:21:./.:0:8:12:11:0/1:12:26:./.:.:.:.:.:.
chr17	72565359	HG2_PB_SVrefine2PB10Xhap12_12300	C	GTACATGTGGTGTATGTGTGTGGTGTGTGTATGTGTGTGCATGTGTGGGCATGGGTGGTGTGGGTGGTGTGTGTGTACATGTGGTGTATGTGTGTGGTGTGTGTATGTGTGTGCATGTGTGGGGGTGTGGGTGGTGTGTGTG	10	PASS	ClusterIDs=HG2_PB_pbsv_16926:HG2_PB_SVrefine2PBcRplusDovetail_4497:HG2_PB_SVrefine2PB10Xhap12_12300:HG2_PB_HySA_30831:HG3_PB_pbsv_16591;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12300:HG2_PB_SVrefine2PBcRplusDovetail_4497;NumExactMatchSVs=2;ClusterMaxShiftDist=0.100334;ClusterMaxSizeDiff=0.100334;ClusterMaxEditDist=0.182432;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=141;DistBack=0;DistForward=4333;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=400;REFWIDENED=17:72565088-72565487;PctSeqSimilarity=0.97;PctSizeSimilarity=0.94;PctRecOverlap=0.3907;SizeDiff=-9;StartDistance=87;EndDistance=87;GTMatch=0;TruScore=76;MatchId=2284.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:43:1|0:6:33:19:4:./.:267:726:265:96:0/0:11:0:./.:.:.:.:.:.
chr17	72620206	HG3_Ill_GATKHCSBGrefine_11047	T	TAAAACACCCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGCCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_25505:HG2_PB_pbsv_16928:HG3_PB_pbsv_16593:HG4_PB_pbsv_16832:HG4_PB_assemblyticsfalcon_10739:HG2_PB_assemblyticsfalcon_10975:HG4_PB_HySA_24648:HG2_Ill_breakscan11_4742:HG2_PB_HySA_30834:HG2_PB_PB10Xdip_13641:HG4_PB_SVrefine2Falcon1Dovetail_10476:HG4_Ill_MetaSV_2084:HG2_Ill_MetaSV_2022:HG2_10X_SVrefine210Xhap12_11746:HG2_PB_SVrefine2Falcon2Bionano_8329:HG3_PB_SVrefine2PBcRDovetail_8187:HG3_Ill_MetaSV_2163:HG3_Ill_GATKHCSBGrefine_11047:HG2_PB_SVrefine2PBcRplusDovetail_4499:HG2_PB_SVrefine2PB10Xhap12_12302:HG2_Ill_GATKHCSBGrefine_11110:HG3_PB_SVrefine2Falcon1Dovetail_10460:HG4_Ill_GATKHCSBGrefine_11476:HG2_PB_SVrefine2Falcon1plusDovetail_4905;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11110:HG2_PB_SVrefine2PB10Xhap12_12302:HG2_PB_SVrefine2PBcRplusDovetail_4499:HG3_Ill_GATKHCSBGrefine_11047:HG3_Ill_MetaSV_2163:HG3_PB_SVrefine2PBcRDovetail_8187;NumExactMatchSVs=6;ClusterMaxShiftDist=0.117073;ClusterMaxSizeDiff=0.117073;ClusterMaxEditDist=0.201626;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=307;DistBack=23763;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=17:72620207-72620217;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=0.9935;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:93:1/1:0:29:0:27:1/1:0:8:0:18:1/1:0:26:1/1:1:60:.:.:.
chr17	72729588	HG2_PB_SVrefine2Falcon2Bionano_8330	G	GGTGTGTGTGATTTGAGGGATGTGTGTGGTGTGAGGTGTGTGGTGTGGTGTGATGTGAGGTGTGTGTGTGAGGTGTGTGTCTGTGATGTTATTTGAGGGGGGTGTGTGTGTGTGTGTTTGGTGAGGTGTGTGTGGTGTGATTTGAGGGGTGAGGTGTGTGTGCGTGGTGAGGTGTGTGTGTCTTTGGTGTGATTTGAAGTGTGTGTGGGGGGTGTGTGTGTCTGTGGTGTGATTTGAGGGTGTGTGTGTGGTGTGAGGTGTGTGTGGTATGATTTGAGGTGTGTGTGTGTGGTGTGAGGTGTGTGTGGTGTGAGGTATGTGATGTGATTTGAGGTGTGTGTGTGGTGTGAGGTGTGTGTGGTATGAGTTGAGGTGCGTGTGTGTGGTATGAGGTGTGTGTGGTGTGAGGTATGTGATGTGATTTGAGGTGTGTGTGTGGTATGAGTTGAGGTGCGTGTGTGTGGTATGAGGTGTGTGTGGTGTGAGGTATGTGATGTGATTTGAGGTGTGTGTGTGGTGTGAGGTGTGTGGTGTGATTTGAGGTGTGTGTGGTGAGGTCTGTGGTGTGATTTGAGGGGTGAGGTGTGTGTGGTGTGAGGTGTGTGTGGTGTGATTTGAGGTGTGTGTGGTGAGGTGTGTGGTGTGATTTGAGGGGTTAGGTGTGTGTGGTGTGAGTGTGTGTGTATGGTGAGGTACGTGTGTCTGTGGTGTGATTTGAAGTGTGTGGTGTGTGTGGTGTGAGGTGTGTGTCTGTGGTGTGATTTGAGGGTGTGTGTGTGGTGTGAGGTGTATGTGGTGTGATTTGATGTGTGTGTGGTGAGGTCTGTGGTGTGATTTGAGGGGTGAGGTGTGTGTGGTGTGAGGTGTGTGTGGTGTGATTTGAGGTGTATGTGTGTGGTTTGAGGTGTGTGGTGTGATTTGAGGTGTGTGTGGTGAGGTGTGTGGTGTAACTTGAGGGGTGTGTGTGGTGTGAGGTGTGTGGTGTGATTTGAGGTGTGTTGGTGAGGTGTGTGGTGTGATTTGAGGTGTGTGTGGTGAGGTGTGTGGTGTAACTTGAGGGGTGTGTGTGGTGTGAGGTGTGTGGTGTGATTTGAGGTGTGTTGGTGAGGTGTGTGGTGTGATTTGAGGTATGAGGTGTGTGGTGTGATTTGAGGTATGAGGTGT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10461:HG2_PB_pbsv_16931:HG3_PB_pbsv_16595:HG4_PB_pbsv_16835:HG2_PB_PB10Xdip_13644:HG2_PB_HySA_30837:HG2_Ill_breakscan11_4743:HG2_PB_assemblyticsfalcon_10977:HG4_PB_assemblyticsfalcon_10740:HG4_PB_SVrefine2Falcon1Dovetail_10477:HG2_PB_SVrefine2Falcon1plusDovetail_4907:HG4_PB_SVrefine2PBcRDovetail_8464:HG3_PB_SVrefine2PBcRDovetail_8188:HG2_PB_SVrefine2PBcRplusDovetail_4501:HG2_PB_SVrefine2PB10Xhap12_12304:HG2_PB_SVrefine2Falcon2Bionano_8330;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8330:HG2_PB_SVrefine2PB10Xhap12_12304:HG2_PB_SVrefine2PBcRplusDovetail_4501:HG3_PB_SVrefine2PBcRDovetail_8188:HG4_PB_SVrefine2PBcRDovetail_8464;NumExactMatchSVs=5;ClusterMaxShiftDist=0.30177;ClusterMaxSizeDiff=0.30177;ClusterMaxEditDist=0.315929;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1163;DistBack=909;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=136;REFWIDENED=17:72729589-72729724;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9991;PctRecOverlap=0.9699;SizeDiff=1;StartDistance=-35;EndDistance=-35;GTMatch=0;TruScore=98;MatchId=2286.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:6:0:5:./.:79:355:85:433:1/1:0:19:./.:9:162:.:1321:.
chr17	73294467	HG4_Ill_GATKHCSBGrefine_11481	T	TCCTGTAATCATAACACTTTGGGAAGCCAAGGCGGGTTGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAACAAAAATTAGCCAGGTGTGGTGGAGGGCG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13649:HG2_PB_assemblyticsfalcon_10986:HG2_PB_SVrefine2Falcon1plusDovetail_4910:HG2_PB_HySA_30847:HG4_PB_pbsv_16839:HG4_PB_HySA_24660:HG3_PB_pbsv_16600:HG3_PB_HySA_25513:HG4_PB_SVrefine2PBcRDovetail_8466:HG4_PB_SVrefine2Falcon1Dovetail_10479:HG4_Ill_SVrefine2DISCOVARDovetail_11849:HG4_Ill_GATKHC_26786:HG4_Ill_GATKHCSBGrefine_11481:HG4_Ill_250bpfermikitraw_22017:HG3_PB_SVrefine2PBcRDovetail_8191:HG3_PB_SVrefine2Falcon1Dovetail_10465:HG3_Ill_manta_3715:HG3_Ill_SVrefine2DISCOVARDovetail_12091:HG3_Ill_GATKHC_26688:HG3_Ill_GATKHCSBGrefine_11049:HG2_PB_SVrefine2PBcRplusDovetail_4504:HG2_PB_SVrefine2PB10Xhap12_12308:HG2_PB_SVrefine2Falcon2Bionano_8333:HG2_Ill_scalpel_15827:HG2_Ill_manta_4551:HG2_Ill_SVrefine2DISCOVARplusDovetail_5309:HG2_Ill_GATKHC_26850:HG2_Ill_GATKHCSBGrefine_11115:HG2_Ill_150bpfermikitraw_21113:HG2_10X_SVrefine210Xhap12_11751:HG2_PB_HySA_30846;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11751:HG2_Ill_150bpfermikitraw_21113:HG2_Ill_GATKHCSBGrefine_11115:HG2_Ill_GATKHC_26850:HG2_Ill_SVrefine2DISCOVARplusDovetail_5309:HG2_Ill_manta_4551:HG2_Ill_scalpel_15827:HG2_PB_SVrefine2Falcon2Bionano_8333:HG2_PB_SVrefine2PB10Xhap12_12308:HG2_PB_SVrefine2PBcRplusDovetail_4504:HG3_Ill_GATKHCSBGrefine_11049:HG3_Ill_GATKHC_26688:HG3_Ill_SVrefine2DISCOVARDovetail_12091:HG3_Ill_manta_3715:HG3_PB_SVrefine2Falcon1Dovetail_10465:HG3_PB_SVrefine2PBcRDovetail_8191:HG4_Ill_250bpfermikitraw_22017:HG4_Ill_GATKHCSBGrefine_11481:HG4_Ill_GATKHC_26786:HG4_Ill_SVrefine2DISCOVARDovetail_11849:HG4_PB_SVrefine2Falcon1Dovetail_10479:HG4_PB_SVrefine2PBcRDovetail_8466;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0640569;ClusterMaxSizeDiff=0.0427046;ClusterMaxEditDist=0.231579;PBcalls=16;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=138;DistBack=33;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=169;REFWIDENED=17:73294468-73294636;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2288.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:0:13:2:12:1/1:0:15:0:17:1/1:0:48:./.:.:.:.:.:.
chr17	73427172	HG3_Ill_SVrefine2DISCOVARDovetail_12092	T	TCCAGGCTGGAGTGCAGTGGCGCTATCTCAGCTCACTGCAACCTCTGCCTCCTGCATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGCGGCCACCACCATGCCTCGCTAATTTTTGTATTTTTGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAAATTCCTGACCTCGTGATCCACCCACTTTAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCTGGCCTTCCAAAATAAATTTTAAACATGGGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCCAAGGTGGGTGGATCACGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGAGGTGCGCGCCTCTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATAGCTTGAACCCGGGAGGCGGAGGTTGCAATGAGCCAAGATCGCGCCATTGTACTCTAGCCTGGGCGACAGGGCAAGACTCCATCTCAAAAAAAAAAAAAAAAGAAAAAAAAATTTAAACATAAGGCTTGTAAAATACTGTGTGGAATTTAACTTAGCTCCTTCTCTTCCAATTCAGGAATTCAGGAGTTTATTTCCCAATGTTTTTTTCTTTTTTTGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4505:HG3_PB_HySA_25516:HG2_PB_pbsv_16936:HG2_PB_HySA_30850:HG4_PB_pbsv_16840:HG2_PB_PB10Xdip_13660:HG3_PB_pbsv_16601:HG4_PB_HySA_24662:HG2_PB_SVrefine2Falcon1plusDovetail_4912:HG4_Ill_GATKHCSBGrefine_11482:HG2_Ill_MetaSV_2025:HG3_PB_SVrefine2Falcon1Dovetail_10466:HG2_PB_SVrefine2Falcon1plusDovetail_4911:HG4_PB_SVrefine2PBcRDovetail_8467:HG4_PB_SVrefine2Falcon1Dovetail_10480:HG4_Ill_SVrefine2DISCOVARDovetail_11850:HG3_Ill_SVrefine2DISCOVARDovetail_12092:HG2_PB_SVrefine2PB10Xhap12_12309:HG2_Ill_SVrefine2DISCOVARplusDovetail_5311:HG3_PB_SVrefine2PBcRDovetail_8192:HG2_PB_SVrefine2Falcon2Bionano_8334;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5311:HG2_PB_SVrefine2PB10Xhap12_12309:HG3_Ill_SVrefine2DISCOVARDovetail_12092:HG4_Ill_SVrefine2DISCOVARDovetail_11850:HG4_PB_SVrefine2Falcon1Dovetail_10480:HG4_PB_SVrefine2PBcRDovetail_8467;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0697509;ClusterMaxSizeDiff=0.0640569;ClusterMaxEditDist=0.284712;PBcalls=16;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=683;DistBack=17737;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=248;REFWIDENED=17:73427173-73427420;PctSeqSimilarity=0.9764;PctSizeSimilarity=0.9856;PctRecOverlap=0.7027;SizeDiff=-10;StartDistance=-201;EndDistance=-201;GTMatch=0;TruScore=88;MatchId=2289.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:45:1/1:0:20:0:22:./.:3:8:0:7:0/1:2:9:1/1:3:81:.:1316:.
chr17	73432729	HG3_PB_SVrefine2PBcRDovetail_8193	G	GGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATAGAACCACTGCATACCAGCCTGGGCAACAGAGCAAGACTCTGTCTCAAAAAACAAACAAACAAACAAAAACTACTAAATCTCTACTAAAAAAAAATTTATTTATTTATTTTTTGAGACAGAGTTTTGCTCTTTTTGCCCAGGCTGGAGTACAACGGTGCAATCTCCGCTCACTGCAACCTCTGACTCTCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACGGGCATGAGCCACCGCACCCGGCCTAAAAAAATTTTTTGGTAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTTGAACTTCTGACCTCAGGTGATCCATAGGTGTGAACCACCGTGCCCGGCCTGACCAATTGTTTTGAATAGGAATATTATATTCCCAGGTATTGACAGCACCTCCAGACACCAACCAGTCACACTGCAAATTCCTGCCCTTGATCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13661:HG3_PB_pbsv_16602:HG2_PB_HySA_30851:HG4_PB_HySA_24663:HG2_PB_pbsv_16937:HG4_PB_assemblyticsfalcon_10751:HG2_PB_SVrefine2Falcon1plusDovetail_4913:HG4_PB_SVrefine2Falcon1Dovetail_10481:HG4_PB_SVrefine2PBcRDovetail_8468:HG4_Ill_manta_3859:HG4_Ill_SVrefine2DISCOVARDovetail_11851:HG4_Ill_MetaSV_2087:HG4_Ill_GATKHCSBGrefine_11483:HG3_PB_SVrefine2PBcRDovetail_8193:HG3_Ill_manta_3716:HG3_Ill_SVrefine2DISCOVARDovetail_12093:HG3_Ill_GATKHCSBGrefine_11050:HG2_PB_SVrefine2PBcRplusDovetail_4506:HG2_PB_SVrefine2PB10Xhap12_12310:HG2_Ill_manta_4552:HG2_Ill_SVrefine2DISCOVARplusDovetail_5312:HG2_Ill_GATKHCSBGrefine_11116:HG2_10X_SVrefine210Xhap12_11752:HG2_PB_SVrefine2Falcon2Bionano_8335:HG3_PB_SVrefine2Falcon1Dovetail_10467:HG4_PB_pbsv_16841;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11752:HG2_Ill_GATKHCSBGrefine_11116:HG2_Ill_SVrefine2DISCOVARplusDovetail_5312:HG2_Ill_manta_4552:HG2_PB_SVrefine2PB10Xhap12_12310:HG2_PB_SVrefine2PBcRplusDovetail_4506:HG3_Ill_GATKHCSBGrefine_11050:HG3_Ill_SVrefine2DISCOVARDovetail_12093:HG3_Ill_manta_3716:HG3_PB_SVrefine2PBcRDovetail_8193:HG4_Ill_GATKHCSBGrefine_11483:HG4_Ill_MetaSV_2087:HG4_Ill_SVrefine2DISCOVARDovetail_11851:HG4_Ill_manta_3859:HG4_PB_SVrefine2PBcRDovetail_8468;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0505345;ClusterMaxSizeDiff=0.0485909;ClusterMaxEditDist=0.144788;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=509;DistBack=5308;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=17:73432730-73432730;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2290.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:35:0:18:1/1:0:19:0:17:1/1:0:38:1/1:3:85:.:1316:.
chr17	74046809	HG3_Ill_GATKHCSBGrefine_11052	G	GGGGAGTTCTATTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4745:HG3_PB_pbsv_16604:HG2_PB_SVrefine2PB10Xhap12_12312:HG3_PB_HySA_25518:HG2_PB_HySA_30855:HG2_PB_pbsv_16939:HG2_Ill_MetaSV_2026:HG3_PB_SVrefine2Falcon1Dovetail_10469:HG3_Ill_GATKHCSBGrefine_11052:HG3_Ill_MetaSV_2165;NumClusterSVs=10;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_11052:HG3_PB_SVrefine2Falcon1Dovetail_10469;NumExactMatchSVs=2;ClusterMaxShiftDist=0.17292;ClusterMaxSizeDiff=0.17292;ClusterMaxEditDist=0.247525;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=-2;DistForward=-1;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=17:74046810-74046824;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2291.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:28:0|1:20:0:0:22:1|0:1:10:20:0:0/1:27:10:0/1:8:44:.:.:.
chr17	74069380	HG4_Ill_SVrefine2DISCOVARDovetail_11855	T	TTTTTTTTTTTTTTTAGATAGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCTGCCACCACGTCCCGCTAATTTTTGTATTTTTAGTGGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACGCCTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACAGCTCCCGGCCTCAGAGGTCAGGCGTTCCAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACCAAAAATACAAAAATTAGCCGGGTATGCTAGCGGGTGCCAGTAATCCCAGCTACTCGGGAGGCTGAGCGCTTAAAACTCAGGAGGTGGAGGTTGCAGTGGGCTGAGATCGGGCCACTGCACTCCAGCCTAGGTGAGGGAGTGAGACTGTCTCAAAAAAAAAAAAAAAAAAAAGTAAGTGTCTGGCCAGGTGTGATGGATCACACCTGTAATCACAGCACTTTGGGAGGCCAGGCTGAAGATTGCTTGAGGCCAGGAGTTCAAGACCAGCCTGGGCAACATAGTGAGACCCCTGTCTCCACACACACACACACACACACACACACACACACACACACACACAAATAAAATTAGCCAGGAGTGGTGGCACCCACCTGTAGTCCCGGTGACTTGAGAGACTGAGATAGAAGGATTGCTTGAGCCCAGGAGTTTGAGGTTACAGTGAGTTATGATCATGCCACTGCACTCCAGGCTGGGTGACAGAACAAGACCCTATCTCTAAAAATAAGTAAATAATTTTTTTTAAAAAGTAAGTGTCCCAAATGTTCATTGATAAGTGAATGGAAAAATAGAATGTGGTATAATGATACAATGGAATATTATTTGACCATAAAAAGGAGTGAAGTGGCCAGGCGTGGTGGCTCATGCCTGTTATCCCAGCATTTTGGGAGGCCGAGGCAGGTGGATCACCTGAGGTCGGGAGTTCAAAACCAGCCTGACCAACATGGAGAAAACCCATCCCTACTAAAAATACAAAATTAGCTGAGTGTGGTGCGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAAGAGTTACTTAAACCCGGGAGGCAGTGGTTGTGGTGAGCCGAGATCGTGCCATTGCACTACAGCCTGGGCAACAACAGTGAAACTCCGTCTCAAAAAAAAAAAAAAAGGAGTGAAGTACTGATTATGCTACAATGTGGATGAACTTTGAAAAACATCATGCTAAATGAAAGAAGCCACACACAAAAGGCCACATATTGTATGATTTTGTTTATATGCAATGTTAAGTATAGGCAAATCTGTAGAGACAAAAAGTAGATCGGTGGTTGTCTGGGCCTGTGGAGATGGGGTAGGGATGGAGATGGGAGATTGGAGACTAAGGGCTAATGGGTATGAGTTTCTTTTGGTGGGGAAGAAAATGTTCTATAAGTGATTGTGGCAACTGTCACACAACTCTGTGAATATACCAAAAACCAAATGAACACTTTAAATGGGCAAATGGTATGATATGTGAATTCTATTTCTATTTTTCTTTTCTTTTTTCTTTTTTCTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCGGGCTGGAGTGCAGTGGTGCAGTCATGGCTCACTGCAGCCTCCACCTCCCAAGTTCAAGCGATTCTTCTGCCTCAGCCTCCAAAGTAGGTGGGACTACAGGTGCATGCCACCACGCTTGGCTAATTTTTTTTTTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCACCCAGCCATGACATGTGAATTATATTTCGACAAAGCTGTTACCCAAAAAAAGTGGGATTATGTTAGTCCTCTAGTCAAAACCATGCACTGCCACCTCATTTGATGAAGACTACATGCCACAATCCTTAGATTGGGGGAGAAAATATCCCCACACGCTATGTGTCTCGTGTCTCCTACCAATCCCCTTGCTGGTTCAGCTCAGGTCATACCATCTTCCCTGCCTCAGGAACACAGGCACCCTCCTACCTTATGGCCTTTGCACTGGCTGTGGTCTCTCTCTCTGAAATGCTTTTCTGGCCACGCACAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAAGTGGGAGGATCGCTTGAGCCCAGGAGTTCAAGACCAGCATGGGGAACACAGGGAGACTCCATCTCTAACAAAAGAAAAGAGGCTGAGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGATAAGGCAGGCGGGTCACCTGAGGTCAGGAGTTTGAGACAGCCTGGCCAATATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAGTCCCAGGTACTCAGGAGGCTGAGGCAGAAGAATTGCTTGAGCCCTAAAGGCGGAGGTTGCAGTGAGCTGAGATCGCACCACTGCACTCCAACCTGGGTGATAGAGTAAGACTCCACCTCAAAAAAAATAAAAAAGAAAAGAAAGAAAAGAAATGCTCTTCCCCTACATACTCGCTTTGCTAGCCCATCACCTCCTTCAAGTCTTTGCTCAAATGTCAACTTAATGAGGTCTGCCTGACCATCCTGCTTTAAAGTGTACCATCACCACCACCCTGGTACTCCCAAATCCCCTTACTCTAAACTACTTTTCCCACAAGTACTTATCAACTTGCAATAGCTTAATACGTTATGTTTATTGTATGTCTCTGTTGCTAGAAAGTTCACGGAGGACCTTGATCTTTGTAGAGCTCACTGGTATAGTATATCCTAAGGACACAGAACAGTGCCTAGTAAGGAGCAGCTGCTTAATAAATATTTGTTGAATAAATAAATGGTAAGCATCTCATAAACACAAACTGTTATCATCTTCCTGTTCAATGAGTAGGCAGGCAGGGCAGGGGTGTGAATAAGCTTTCCTTACCAAGAGGAGGGGGTAGCTGGGCTCCTGAGAGGCCTTTTTCTTGGGGGAAAAAAGAGGAAAAAGAATATTCTTGACACTGGGCCCTAGGGACCAGGACAGGGGAAGGTGAGGCAGAACCTGCAGAGACAGAAGGTGGTGATTTTCAGACCCAGCGGACTGCGAGGCTTAAGTTCTACTTAAATAGTAATGATTCATTGTCCCAAATGCTTGATGCAGAAACAAATGTTTAAGTTTTATTGCAACCTAAACACCATCCAGGGAAATGCTGCTTGTGCGTGGAACTCTACTATATTTTTTGTTTTGTTTTGTTTTGTTTTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5317:HG3_PB_pbsv_16606:HG4_PB_pbsv_16844:HG2_PB_pbsv_16941:HG2_PB_HySA_30858:HG2_PB_PB10Xdip_13664:HG3_PB_HySA_25519:HG2_PB_SVrefine2Falcon1plusDovetail_4915:HG4_PB_assemblyticsfalcon_10756:HG3_PB_SVrefine2PBcRDovetail_8196:HG2_PB_SVrefine2Falcon2Bionano_8337:HG3_PB_SVrefine2Falcon1Dovetail_10471:HG4_PB_SVrefine2Falcon1Dovetail_10485:HG2_PB_SVrefine2PB10Xhap12_12314:HG3_Ill_SVrefine2DISCOVARDovetail_12095:HG2_PB_SVrefine2PBcRplusDovetail_4509:HG4_PB_SVrefine2PBcRDovetail_8472:HG4_Ill_SVrefine2DISCOVARDovetail_11855;NumClusterSVs=18;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_11855:HG4_PB_SVrefine2PBcRDovetail_8472;NumExactMatchSVs=2;ClusterMaxShiftDist=0.220859;ClusterMaxSizeDiff=0.220859;ClusterMaxEditDist=0.279861;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=3431;DistBack=10555;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=294;REFWIDENED=17:74069381-74069674;PctSeqSimilarity=0.993;PctSizeSimilarity=0.9965;PctRecOverlap=0.9394;SizeDiff=12;StartDistance=-202;EndDistance=-202;GTMatch=0;TruScore=97;MatchId=2292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:109:1/1:0:27:0:18:./.:0:5:0:5:1/1:0:12:1/1:4:544:.:3502:.
chr17	74921321	HG2_PB_pbsv_16945	T	TTTCCCGTCCCGTCCCCCCTCCCCTCCCCTCCCTTCCCCCCTCCCCTCCCTTTCCCCTCCCCTCCTCCCTCCCCTCCCCCTCCCCTCCTCCCTCCCCTCCCCTCCTCCCTCCCCTCCCCTCCCTTCCCTCCCTCCCTCCACCTCCCCTTCCCCTTCCCTTCCCCTCCCCTCCTCCTCCCCTCCCTTCCCCTCCCCTCCTCCCTCCCCTCCCTTCCCCTCCTCCTTCCTCCTCCCTTCCCTTCCCCCTTCCCCTCCCCTCCCTCCACCCCTCCCCTCCCCTCCACCCTCCCCTCCTCCCTCCCCTTCCCTCCCCTCCCCTCCACCTCGCTTCCCCTCCCCTTCCCCTCCTCCCTCCCCTCCCCCTCCCCCCCCCCATTCCTCCCTCCCCTTCCTCCCCCTCCCCTCCCCTCCCCTCCCTTCCCTCCCCCTTCCCCTCCCCCTTCCCCTCCCCCCATCCATCCCCTTCCCCTTCCTACCCCTCCCCTCCCCCCTCCCTCCCCCTTCCCTCCACTCCCCTCTGCCCTTCCCTCCCCGCCCCTCCCCTCCCTTTCCCTCCCTTCCCTTCCCCTCACCCCCTTCCCTCCCTTTCCCTTCCTTCTTCCCCTCCCCCCTCTCCTCCCACCTCCCTTACCCCTCGCTTGCCCCTTCCCTCCCCTCTCCTCTCCCCTCCCCACCCCTCCCCTTCCCTCCCCACCTCCCCCCTCCCCTCCCTTCACTTCTCCTGTCCCCACTCCTCCTCTCCCCTCCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4511:HG3_PB_pbsv_16613:HG3_PB_assemblyticsfalcon_10974:HG4_PB_assemblyticsfalcon_10770:HG2_PB_assemblyticsfalcon_11007:HG4_PB_pbsv_16850:HG4_PB_SVrefine2Falcon1Dovetail_10491:HG2_PB_pbsv_16945:HG3_PB_HySA_25530:HG2_PB_HySA_30873:HG2_PB_PB10Xdip_13666:HG3_PB_SVrefine2Falcon1Dovetail_10475:HG4_PB_SVrefine2PBcRDovetail_8475:HG2_PB_SVrefine2PB10Xhap12_12316:HG2_PB_SVrefine2Falcon1plusDovetail_4917:HG4_PB_HySA_24678:HG3_PB_SVrefine2PBcRDovetail_8200:HG2_PB_SVrefine2Falcon2Bionano_8339;NumClusterSVs=18;ExactMatchIDs=HG2_PB_pbsv_16945;NumExactMatchSVs=1;ClusterMaxShiftDist=0.092223;ClusterMaxSizeDiff=0.092223;ClusterMaxEditDist=0.205024;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=748;DistBack=3;DistForward=10601;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=17:74921322-74921321;PctSeqSimilarity=0.957;PctSizeSimilarity=0.992;PctRecOverlap=0.9907;SizeDiff=-6;StartDistance=4;EndDistance=4;GTMatch=1;TruScore=97;MatchId=2293.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:1:5:0:11:1/1:0:12:0:7:./.:0:3:0/1:6:22:.:.:.
chr17	75099788	HG3_Ill_GATKHCSBGrefine_11057	T	TGCTGGGATTACAGGTGTGAGCCACTGCCTGGCCTGAAATGGGTTTTGACTGCTTCTAAGACCCTGCTCAGTCCCAGTTCCTCTGAGTTGCTCAGTGATATCTTCAATAAAAGCTGGGACTGGCCATATTGAATTTTACCTGGGCCCTGCTCACAGGTGCACCCCTTGTTGATCTATGGGGCCCTGCCCCAGACCCCCAAATTCCCATTCTTGGTCTGGCAAGTGATTTGCTGAACTGTTTGTCCCCACTGATCAATGGGGGAAAAATGCCTGTTCATGAGACTTTGGTTCTTTCCTAACTTCCCCCCCACTCCTTACCTTCCTGCAGGCCCCTGAACTTTAGCCCCACCTCAGTGGAGCCGGCACAGGGCCCCATCAGAGCTCCCAACAGGAATAGGGTCACCTCGGGCTCTATCTCTCCATACCCACCTTCCACCCACTTCTCTGGTTCTCTTTTGGTTTTGTTGTGTTGTTTTGTTTTGTTTTTTGAGACGGAGTCTCACTCTGTTGCCCAGGCTGGAGTGTAGTGGCACAGTCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTGTCCTGCCTCAGCCTCCTAAGTAGCTGGGATTACAGGCGTGTGCCAGCACACCCAGCTAATTTTTGTATTTTTACTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAATTCCTGACCTCATGATCTGCCCACCTCCGCCTTCTAACATGCTGGAATTATAGGCATGGAGCCACCGCGCCCTGCCTCTCTTTTGGTTTAACCCTTTGCCATCCAGCCAGA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8477:HG4_PB_pbsv_16852:HG2_PB_pbsv_16947:HG3_PB_pbsv_16615:HG2_PB_PB10Xdip_13667:HG4_PB_assemblyticsfalcon_10774:HG3_PB_assemblyticsfalcon_10978:HG2_PB_assemblyticsfalcon_11009:HG2_PB_HySA_30878:HG4_PB_HySA_24680:HG4_PB_SVrefine2Falcon1Dovetail_10493:HG3_PB_SVrefine2Falcon1Dovetail_10477:HG4_Ill_MetaSV_2090:HG4_Ill_GATKHCSBGrefine_11488:HG3_Ill_SVrefine2DISCOVARDovetail_12102:HG3_Ill_MetaSV_2168:HG3_Ill_GATKHCSBGrefine_11057:HG2_PB_SVrefine2PBcRplusDovetail_4513:HG2_Ill_MetaSV_2028:HG2_Ill_GATKHCSBGrefine_11121:HG2_10X_SVrefine210Xhap12_11765:HG2_PB_SVrefine2Falcon1plusDovetail_4919:HG3_PB_SVrefine2PBcRDovetail_8202:HG2_PB_SVrefine2PB10Xhap12_12318:HG3_Ill_Spiral_17338:HG2_Ill_Spiral_1108;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11765:HG2_Ill_GATKHCSBGrefine_11121:HG2_Ill_MetaSV_2028:HG2_PB_SVrefine2PBcRplusDovetail_4513:HG3_Ill_GATKHCSBGrefine_11057:HG3_Ill_MetaSV_2168:HG3_Ill_SVrefine2DISCOVARDovetail_12102:HG4_Ill_GATKHCSBGrefine_11488:HG4_Ill_MetaSV_2090;NumExactMatchSVs=9;ClusterMaxShiftDist=0.134962;ClusterMaxSizeDiff=0.133799;ClusterMaxEditDist=0.201569;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=803;DistBack=31518;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=17:75099789-75099791;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2295.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:15:44:0|1:15:3:0:26:1|0:0:10:25:0:0/1:20:7:0/1:14:62:.:.:.
chr17	75376343	HG2_Ill_250bpfermikitraw_22415	C	CCCCCGCCCCCGCATGCCCGCCTCCCCCTCCATGCCCGCCTCCCCCTCCATGCCCGCTCCCCCCCATGCCCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8344:HG4_PB_pbsv_16859:HG2_PB_PB10Xdip_13673:HG3_PB_HySA_25538:HG3_Ill_GATKHCSBGrefine_11062:HG2_Ill_250bpfermikitraw_22415:HG4_PB_HySA_24684:HG2_PB_SVrefine2PBcRplusDovetail_4516:HG2_PB_SVrefine2PB10Xhap12_12323:HG2_PB_HySA_30881:HG3_PB_pbsv_16624:HG2_PB_pbsv_16954;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22415:HG3_Ill_GATKHCSBGrefine_11062;NumExactMatchSVs=2;ClusterMaxShiftDist=0.143885;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.27972;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=25;REFWIDENED=17:75376344-75376368;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.9861;PctRecOverlap=0.9726;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=98;MatchId=2296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:54:1/1:4:31:1:22:./.:0:22:1:7:1/1:0:13:./.:.:.:.:.:.
chr17	75481374	HG4_PB_SVrefine2Falcon1Dovetail_10497	G	GGTTGGTGATGGGGTGGTGGGGTGGTGATTGTGATGGGGTGATGGTAATGTGGGTGATGGTGATTGTGGTGGTAGTGGTGGTGATGGTGATTGTGATGGTGGTGAAGGGGGTGATGGTGGTGATTTGTGGTGAAGGGGTGATGGTGATTGTGATGGTGGTGAAGGGGTGATGGTGGTGATTGTGATGTGGTGAAGGGGGTGATGTGTGGCGATTGTGGTGGTGAAGGGGGTGATGGTGATTGTGATGGTGGTGAAGGGGGTGATGGTGATTGTGATGGTGGGTGATGGGGTGATGGTGGTGATGGGGCGATGGTGGTGATTGTGATGGTGGTGAAGGGGTGATGGTGATTGTGATGGTGGTGATTGGTGTGGTGATGTGGGTGGTGGTGGTGATGTGGGTGGTGGTGGTGATTGTGATGGGGTGATGGTAATGTGGGTGATGGTGATTGTGGTGGTAGTGGTGGTGATGGTGATGATTGTGATGGTGGTGAAGGGGGTGATGGTGGTGATTGTGGTGGTGGTAATGGTGATGGTGGTAAAGGGGTGATGGTGGTGATTGTGGTGATGTGGGTGGTGGTGGTGATGTGGGTGGTGGTGGTGATTGTGATGGGGGTGATGATGGTAATGTGGGTGATGGTGTTGTGGTGGTGGTGGTGATGGTGATGATTGTGATGGTGGTGAAGGGGTGATGGTGGTGTTGTGATGGTGGTGATTGTGATGGTGATGTGGGTGATGGTGGTGTTGAT	10	PASS	ClusterIDs=HG3_PB_pbsv_16625:HG2_PB_PB10Xdip_13674:HG4_PB_assemblyticsfalcon_10783:HG4_PB_SVrefine2Falcon1Dovetail_10497:HG2_PB_HySA_30882;NumClusterSVs=5;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_10497;NumExactMatchSVs=1;ClusterMaxShiftDist=0.102988;ClusterMaxSizeDiff=0.102988;ClusterMaxEditDist=0.232676;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=745;DistBack=235;DistForward=1315;DistMin=235;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1228;REFWIDENED=17:75480248-75481475;PctSeqSimilarity=0.9656;PctSizeSimilarity=0.9739;PctRecOverlap=0.6248;SizeDiff=-20;StartDistance=277;EndDistance=277;GTMatch=1;TruScore=85;MatchId=2297.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:82:1/1:0:14:3:18:./.:263:395:302:348:0/0:30:0:1/1:5:117:.:.:.
chr17	75643650	HG2_PB_pbsv_16959	T	TTTCGTGCAAAAGCTGGAGATGGCGTGCGGATTTCCGTGTGTTTAGTGTACTTTCGTGCAGCTGGAGATGGCCGTGCGGATTTCCGTGTTTAGTGTTAACTTTAGTGCAAGCTGGAGATGGCCGGTGCGCGGATTTCCGTGTGTTTAGTGTACTTTGTGCAAGCTGGAGATGGCCGTGCGGATTTCTGTGTGTGTTAGTGCACTTTTGTGGCAAACCTGGAGATGGCCGTGCGATTTCCGTGTGTTTAGTGTACTTTCGTGCAAGCCTGGAGACGGCCGTGTGGATTTTCCATGTGTTTAGTGTACTTTGTGCAAAGCTGGAGAATGGCTGTGCGGATTTTGTGTGTGTTAGTGCAC	10	PASS	ClusterIDs=HG2_PB_pbsv_16959:HG3_PB_pbsv_16629:HG3_PB_SVrefine2Falcon1Dovetail_10483:HG2_PB_SVrefine2Falcon2Bionano_8347;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_16959;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0807799;ClusterMaxSizeDiff=0.0779944;ClusterMaxEditDist=0.164384;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=356;DistBack=31;DistForward=32;DistMin=31;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=352;REFWIDENED=17:75643353-75643704;PctSeqSimilarity=0.9679;PctSizeSimilarity=0.9888;PctRecOverlap=0.986;SizeDiff=4;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=98;MatchId=2298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:22:0|1:19:0:1:17:0/0:7:0:15:0:0/0:21:1:0/1:5:7:.:.:.
chr17	75881642	HG2_Ill_SVrefine2DISCOVARplusDovetail_5328	GACAG	TGGATAGATGGATAGATGAGTGATGGGTGGGTGGGTGGGTGGCTAGAAGGAAGGGAGGAAAGGAAGGAATACAAGAGTCATTCTTGGTGTAAAGGCCCACATAGGTCAGCAGTACAAGGCCAGCCTGGCCAACACGGTGAAACCCCGTCTCTACTAAAAAGACAAAAAATTAGCCAGGCGTGGTGGTTTGGGCCTGTAATCCCAGCTACTCAGGAGGTTGAGGCAGGAGAATCACTTGCACCTGGTAGGCGGAGGTTGCAGTGAGCCGAGATTGTGCCACTGTACTCCAGCCTGGGTGACAGAGTGAGATTCTGCCTCAAAAATAAATGAAAGAAAAGAAAGAGAGAAAGAAAAGAAGGAAAGGAAAGAAGAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_16636:HG2_PB_HySA_30897:HG4_PB_assemblyticsfalcon_10791:HG4_PB_SVrefine2Falcon1Dovetail_10500:HG4_PB_SVrefine2PBcRDovetail_8482:HG4_Ill_SVrefine2DISCOVARDovetail_11867:HG3_PB_SVrefine2PBcRDovetail_8214:HG2_PB_assemblyticsfalcon_11026:HG2_PB_SVrefine2PBcRplusDovetail_4523:HG2_PB_SVrefine2PB10Xhap12_12334:HG2_PB_SVrefine2Falcon2Bionano_8351:HG2_PB_SVrefine2Falcon1plusDovetail_4931:HG2_PB_PB10Xdip_13684:HG2_Ill_SVrefine2DISCOVARplusDovetail_5328:HG2_10X_SVrefine210Xhap12_11779:HG3_PB_SVrefine2Falcon1Dovetail_10487:HG4_Ill_MetaSV_2094:HG2_PB_HySA_30896:HG2_PB_pbsv_16967;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11779:HG2_Ill_SVrefine2DISCOVARplusDovetail_5328:HG2_PB_PB10Xdip_13684:HG2_PB_SVrefine2Falcon1plusDovetail_4931:HG2_PB_SVrefine2Falcon2Bionano_8351:HG2_PB_SVrefine2PB10Xhap12_12334:HG2_PB_SVrefine2PBcRplusDovetail_4523:HG2_PB_assemblyticsfalcon_11026:HG3_PB_SVrefine2PBcRDovetail_8214:HG4_Ill_SVrefine2DISCOVARDovetail_11867:HG4_PB_SVrefine2PBcRDovetail_8482;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0700809;ClusterMaxSizeDiff=0.0700809;ClusterMaxEditDist=0.215633;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=369;DistBack=-1;DistForward=3362;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:75881647-75881641;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9973;PctRecOverlap=0.9866;SizeDiff=-1;StartDistance=2;EndDistance=6;GTMatch=0;TruScore=99;MatchId=2300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:1:11:0:7:1/1:0:12:0:20:./.:0:5:1/1:2:36:.:.:.
chr17	76139098	HG2_PB_SVrefine2Falcon1plusDovetail_4934	C	CTGTTGCCCAGGCTGGAGTGCAGTGGCAAGATCTTGGCTCACTGCAACCTCTGCCTCACAGGTTCAAGCCATCCTCCTGCCTTAGCCTCCTGAGTAGCTGGGACTAGAGGCACCTACCACCATGCCTGGCTAATTTTTTGTTTTGTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGAGATGGAGTTTTGCTCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11782:HG2_PB_pbsv_16970:HG2_PB_HySA_30901:HG3_PB_HySA_25555:HG3_PB_pbsv_16642:HG2_PB_PB10Xdip_13689:HG4_PB_pbsv_16868:HG4_Ill_MetaSV_2096:HG4_Ill_GATKHCSBGrefine_11495:HG3_Ill_GATKHCSBGrefine_11066:HG2_Ill_MetaSV_2036:HG2_Ill_GATKHC_26887:HG2_Ill_GATKHCSBGrefine_11134:HG4_PB_HySA_24688:HG3_PB_SVrefine2Falcon1Dovetail_10490:HG4_PB_SVrefine2Falcon1Dovetail_10505:HG4_Ill_SVrefine2DISCOVARDovetail_11870:HG3_Ill_SVrefine2DISCOVARDovetail_12117:HG2_PB_SVrefine2PBcRplusDovetail_4525:HG2_PB_SVrefine2PB10Xhap12_12337:HG2_PB_SVrefine2Falcon2Bionano_8354:HG2_PB_SVrefine2Falcon1plusDovetail_4934:HG2_Ill_SVrefine2DISCOVARplusDovetail_5330;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11782:HG4_Ill_SVrefine2DISCOVARDovetail_11870:HG3_Ill_SVrefine2DISCOVARDovetail_12117:HG2_PB_SVrefine2PBcRplusDovetail_4525:HG2_PB_SVrefine2PB10Xhap12_12337:HG2_PB_SVrefine2Falcon2Bionano_8354:HG2_PB_SVrefine2Falcon1plusDovetail_4934:HG2_Ill_SVrefine2DISCOVARplusDovetail_5330;NumExactMatchSVs=8;ClusterMaxShiftDist=0.128079;ClusterMaxSizeDiff=0.128079;ClusterMaxEditDist=0.211823;PBcalls=13;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=202;DistBack=18;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=140;REFWIDENED=17:76139099-76139238;PctSeqSimilarity=0.9942;PctSizeSimilarity=1;PctRecOverlap=0.7192;SizeDiff=0;StartDistance=-57;EndDistance=-57;GTMatch=0;TruScore=90;MatchId=2301.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:29:1/1:2:14:0:11:1/1:0:13:0:6:1/1:0:38:./.:.:.:.:.:.
chr17	76153046	HG2_10X_SVrefine210Xhap12_11783	G	GGAGGTAGCCCTTTTTCTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8485:HG4_PB_pbsv_16869:HG2_PB_assemblyticsfalcon_11030:HG2_PB_pbsv_16971:HG2_PB_SVrefine2Falcon1plusDovetail_4935:HG4_Ill_MetaSV_2097:HG4_Ill_GATKHCSBGrefine_11496:HG2_Ill_GATKHCSBGrefine_11135:HG2_10X_SVrefine210Xhap12_11783;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11783:HG2_Ill_GATKHCSBGrefine_11135:HG4_Ill_GATKHCSBGrefine_11496:HG4_Ill_MetaSV_2097;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0712074;ClusterMaxSizeDiff=0.0681115;ClusterMaxEditDist=0.185907;PBcalls=5;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=317;DistBack=13805;DistForward=32;DistMin=32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=17:76153047-76153082;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2302.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:15:0|1:23:1:0:12:0|1:26:0:0:10:0/1:25:12:0/1:7:18:.:.:.
chr17	76207145	HG4_PB_pbsv_16870	G	GGCTGGTCTCGAACTCCTGCACCCTTGTGATCTGCACCCACCTCAGCCTCCCAAAGTCCTGGGATTACAGCCGTGAGGCCCACCGCGCCTGGCTCTTTTTCTCTCTTCTTTTTTTTTTGGTTCCGAGACAGAGTTCTCACTCTTGTTGCCCAGGCTGGAGTGCTGAAGTGGAAGCGGGATCTTGGCTTCCACTTGCAACCTCCACTCCAGGTTCAAGCGATTCTCCTGTCTGAGCTGGACTGCAGGCGCGCACCACCACGCCTGGCTAATTTTGTATTTTTAGTTTAGAGACAGGGCTGGTTTCCACCATTATTGGCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8486:HG2_PB_HySA_30902:HG4_PB_pbsv_16870:HG4_PB_HySA_24689:HG2_PB_pbsv_16972:HG3_PB_SVrefine2Falcon1Dovetail_10491:HG2_PB_SVrefine2Falcon1plusDovetail_4936:HG4_PB_SVrefine2Falcon1Dovetail_10506:HG2_PB_SVrefine2Falcon2Bionano_8355;NumClusterSVs=9;ExactMatchIDs=HG4_PB_pbsv_16870;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0906149;ClusterMaxSizeDiff=0.0582524;ClusterMaxEditDist=0.333333;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=317;DistBack=181;DistForward=46414;DistMin=181;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=613;REFWIDENED=17:76206615-76207227;PctSeqSimilarity=0.9489;PctSizeSimilarity=0.9621;PctRecOverlap=0.3281;SizeDiff=12;StartDistance=207;EndDistance=207;GTMatch=0;TruScore=74;MatchId=2303.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:0|1:26:0:3:25:0/0:25:0:15:0:0/0:43:1:0/1:11:5:.:.:.
chr17	76347338	HG2_PB_SVrefine2PB10Xhap12_12338	T	TCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAATTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCACACCAGGCTAATTTTTTGCATTTTTAGGAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCCGCCCGACTCGACCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4746:HG3_PB_pbsv_16644:HG2_PB_pbsv_16974:HG4_PB_pbsv_16872:HG4_PB_assemblyticsfalcon_10796:HG2_PB_assemblyticsfalcon_11033:HG3_PB_assemblyticsfalcon_11000:HG2_PB_assemblyticsPBcR_10653:HG3_PB_SVrefine2Falcon1Dovetail_10493:HG3_Ill_GATKHCSBGrefine_11068:HG2_10X_SVrefine210Xhap12_11784:HG4_PB_SVrefine2Falcon1Dovetail_10508:HG2_PB_SVrefine2Falcon1plusDovetail_4938:HG3_PB_SVrefine2PBcRDovetail_8220:HG3_Ill_SVrefine2DISCOVARDovetail_12118:HG4_PB_SVrefine2PBcRDovetail_8488:HG3_Ill_MetaSV_2180:HG2_PB_SVrefine2PBcRplusDovetail_4527:HG2_PB_SVrefine2PB10Xhap12_12338:HG4_Ill_SVrefine2DISCOVARDovetail_11871:HG2_Ill_MetaSV_2038:HG2_PB_SVrefine2Falcon2Bionano_8357:HG3_PB_HySA_25556:HG4_PB_HySA_24691:HG2_PB_PB10Xdip_13691;NumClusterSVs=25;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12338:HG2_PB_SVrefine2PBcRplusDovetail_4527;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0848896;ClusterMaxSizeDiff=0.0848896;ClusterMaxEditDist=0.247849;PBcalls=18;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=575;DistBack=18;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=17:76347339-76347346;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9983;PctRecOverlap=0.9965;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2304.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:36:0:19:./.:1:4:1:7:1/1:0:27:1/1:4:105:.:.:.
chr17	76418568	HG2_Ill_Krunchall_22779	A	ATGGGTGTGTTTGCCTTTTTTCCCCCTTTTGAGACAGGGTCTCACTCTGTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11785:HG4_PB_HySA_24692:HG4_PB_assemblyticsfalcon_10797:HG2_PB_HySA_30905:HG4_Ill_svaba_20898:HG4_Ill_SVrefine2DISCOVARDovetail_11872:HG4_Ill_Krunchall_23084:HG4_Ill_GATKHC_26829:HG4_Ill_GATKHCSBGrefine_11497:HG4_Ill_FB_14303:HG4_Ill_250bpfermikitraw_22048:HG4_Ill_150bpfermikitraw_21248:HG2_PB_SVrefine2Falcon2Bionano_8358:HG2_Ill_svaba_20944:HG2_Ill_Krunchall_22779:HG2_Ill_GATKHC_26889:HG2_Ill_GATKHCSBGrefine_11137:HG2_Ill_FB_14461:HG2_Ill_250bpfermikitraw_22425:HG2_Ill_150bpfermikitraw_21144;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11785:HG4_Ill_svaba_20898:HG4_Ill_SVrefine2DISCOVARDovetail_11872:HG4_Ill_Krunchall_23084:HG4_Ill_GATKHC_26829:HG4_Ill_GATKHCSBGrefine_11497:HG4_Ill_FB_14303:HG4_Ill_250bpfermikitraw_22048:HG4_Ill_150bpfermikitraw_21248:HG2_PB_SVrefine2Falcon2Bionano_8358:HG2_Ill_svaba_20944:HG2_Ill_Krunchall_22779:HG2_Ill_GATKHC_26889:HG2_Ill_GATKHCSBGrefine_11137:HG2_Ill_FB_14461:HG2_Ill_250bpfermikitraw_22425:HG2_Ill_150bpfermikitraw_21144;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.0769231;PBcalls=4;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=50;DistBack=20055;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=50;REFWIDENED=17:76418569-76418618;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:25:0|1:34:2:1:20:0|1:13:0:0:18:0/1:29:34:./.:.:.:.:.:.
chr17	76546425	HG4_PB_SVrefine2Falcon1Dovetail_10511	T	TGCCCAGCACTGAAACTGAGGCAGGGCTGGTAGGGGCTGAACTGTGCCCCCCAAATCCGCGTGTAGGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8361:HG2_PB_HySA_30907:HG2_PB_PB10Xdip_13696:HG3_PB_pbsv_16648:HG4_PB_HySA_24694:HG4_PB_pbsv_16875:HG3_PB_HySA_25559:HG4_Ill_svaba_20907:HG3_Ill_svaba_21156:HG2_Ill_svaba_20956:HG2_PB_pbsv_16978:HG3_Ill_Krunchall_22356:HG4_PB_SVrefine2PBcRDovetail_8489:HG4_PB_SVrefine2Falcon1Dovetail_10511:HG4_Ill_svaba_20906:HG4_Ill_manta_3867:HG4_Ill_SVrefine2DISCOVARDovetail_11873:HG4_Ill_Krunchall_23086:HG4_Ill_GATKHC_26833:HG4_Ill_GATKHCSBGrefine_11498:HG4_Ill_250bpfermikitraw_22051:HG4_Ill_150bpfermikitraw_21252:HG3_PB_SVrefine2PBcRDovetail_8223:HG3_Ill_svaba_21155:HG2_Ill_svaba_20955:HG2_Ill_SVrefine2DISCOVARplusDovetail_5332:HG2_Ill_150bpfermikitraw_21149:HG2_10X_SVrefine210Xhap12_11786:HG3_Ill_manta_3721:HG3_Ill_GATKHC_26736:HG3_Ill_GATKHCSBGrefine_11069:HG3_Ill_250bpfermikitraw_21769:HG3_Ill_150bpfermikitraw_21185:HG2_Ill_Krunchall_22784:HG2_Ill_GATKHC_26895:HG2_Ill_GATKHCSBGrefine_11139:HG2_Ill_250bpfermikitraw_22431:HG2_PB_assemblyticsfalcon_11037;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11786:HG2_Ill_150bpfermikitraw_21149:HG2_Ill_SVrefine2DISCOVARplusDovetail_5332:HG2_Ill_svaba_20955:HG3_Ill_svaba_21155:HG3_PB_SVrefine2PBcRDovetail_8223:HG4_Ill_150bpfermikitraw_21252:HG4_Ill_250bpfermikitraw_22051:HG4_Ill_GATKHCSBGrefine_11498:HG4_Ill_GATKHC_26833:HG4_Ill_Krunchall_23086:HG4_Ill_SVrefine2DISCOVARDovetail_11873:HG4_Ill_manta_3867:HG4_Ill_svaba_20906:HG4_PB_SVrefine2Falcon1Dovetail_10511:HG4_PB_SVrefine2PBcRDovetail_8489;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0875912;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.342857;PBcalls=12;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=67;DistBack=-67;DistForward=-1;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=71;REFWIDENED=17:76546426-76546496;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2307.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:42:1/1:1:20:2:16:./.:2:27:0:23:1/1:1:49:./.:.:.:.:.:.
chr17	76627745	HG3_PB_pbsv_16650	G	GGCGGAGAAGAGGGAGGGAGAAGAGGAGAGAAGAGGGAGGAGGGAGAAGGAGGAGAGAAGAGGGGAGGAGGGGAGAAGAGGGGAAGGGAAGAAGAGAGGAGGGAGGAGAAGAGGGGAAGGAGAAGAGGGAGAGCGAGAAAGAGGCGGACTGGAGGGAGGGAGAAGAGGGATGGTAGGGGAGCTGAGGGAGAAGAGGGGAAGGGAGAGGAGAAGAGGAGACGGGGATGGGGACGAGGAGAAGAAGGAGGGGAGGAGGAGAAGAGGGAGGGAGAGGGGAGAAGAGGGAGGGAGGGCGAGAAGAGGGAGGGAGGGAAAGAGGGGAGGGAGGGGAGAAGAAGGGAGAAGAGAGAAGAAGGGAGGAGAGAAGAGGGTAAGGAAGAAGATGGGAGGAAGAAGAGAGGAGGAGGGGAGAGACGAGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4530:HG2_PB_PB10Xdip_13697:HG2_PB_SVrefine2Falcon2Bionano_8362:HG3_PB_pbsv_16650:HG2_PB_SVrefine2PB10Xhap12_12343:HG2_PB_SVrefine2PB10Xhap12_12342:HG3_PB_SVrefine2PBcRDovetail_8224:HG2_PB_SVrefine2Falcon1plusDovetail_4941;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_16650;NumExactMatchSVs=1;ClusterMaxShiftDist=0.255164;ClusterMaxSizeDiff=0.255164;ClusterMaxEditDist=0.303767;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=420;DistBack=-164;DistForward=47;DistMin=-164;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=125;REFWIDENED=17:76627723-76627847;PctSeqSimilarity=0.9282;PctSizeSimilarity=0.9502;PctRecOverlap=0.7404;SizeDiff=-22;StartDistance=-104;EndDistance=-104;GTMatch=1;TruScore=87;MatchId=2308.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:28:0:14:./.:11:1:15:2:./.:3:0:0/1:9:9:.:.:.
chr17	77315582	HG2_PB_SVrefine2PBcRplusDovetail_4533	T	TTGGTCTTGTCTGGGCTGCTGGTCTTGTCTGGGCTGCTGGGCTATGTCTGGGCTGCTGGTCTTGTATGGGCTGCTGGGCCAGCTGTTCTTATCCTGGCTGCTGGTCTTGTCCGGGCTGCTGGTCTTGTCTGGGCTGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4945:HG4_PB_pbsv_16882:HG2_PB_HySA_30924:HG3_PB_HySA_25577:HG2_PB_PB10Xdip_13700:HG3_PB_pbsv_16658:HG4_PB_SVrefine2Falcon1Dovetail_10516:HG3_PB_SVrefine2Falcon1Dovetail_10501:HG2_PB_SVrefine2PBcRplusDovetail_4533:HG2_PB_SVrefine2PB10Xhap12_12347:HG2_PB_SVrefine2Falcon2Bionano_8363;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4945:HG4_PB_SVrefine2Falcon1Dovetail_10516:HG3_PB_SVrefine2Falcon1Dovetail_10501:HG2_PB_SVrefine2PBcRplusDovetail_4533:HG2_PB_SVrefine2PB10Xhap12_12347:HG2_PB_SVrefine2Falcon2Bionano_8363;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0711744;ClusterMaxSizeDiff=0.0636042;ClusterMaxEditDist=0.227586;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=136;DistBack=645;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=598;REFWIDENED=17:77315583-77316180;PctSeqSimilarity=0.9918;PctSizeSimilarity=0.9927;PctRecOverlap=0.6715;SizeDiff=-1;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=88;MatchId=2310.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:0:16:0:14:./.:0:3:0:2:./.:2:0:./.:.:.:.:.:.
chr17	78056044	HG2_Ill_SVrefine2DISCOVARplusDovetail_5340	C	CCAGGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGTGAAGCCAAGGCAGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGAGAAACCCTGTCTCTGCTAAAAATACAAAAAATTAGCCAGGCGTGGTGGTGTGCGCCTATAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAGAAAACTTAGAAATACAGAAAGGCATAAAGAAGAAAATGAGACAGCTCTAGGCCCACCATCCAGAGGCAACTTTTTTTTAAATTTGGTAAACTTCCTTCTGGAAATTTTTAATACAGAAACACATTTGCACCCACCCACAAACACGTCATTCTCACACACACACATTCGCACACACGAACACACATGCAATTGCACATGCCCCCATGCACACACAAGAAAACACAAACTCATAAAAACACACACAAACTCCTACACACACACACTCAAACTCCTACACACACATACACTCAAACTCCTACACACACACAAACTCCTACACACACACACATACACTCAAACTCCTACACACACACACTCAAACTCCACACACACACTCAAACTCCTACACCCACACACAAACATACAAACTGCTGCACACATACACTCAAACTCCTACACACACACACACTCAAACTCCTACACACACAAACATACACTCAAACTCCTACACACATACTCAAACTCCTACACACACACACTCAAACTCCTACACACACACTCAAACTCCTACAAACACACACATACACTCAAACTCCTACACACACTCAAACTCCTACAAACACAAACTCCTACACACACACTCAAACTCCTACACACACATACACTCAAACTCCTACAAACACACACTCAAACTCCTACAAACACACACTCAAACTCCTACACACACAAACGCCTACAAACACAAACACACTCAAACTCCTACAAACACACACACACAAGCACACACCTTACGCAACACTGGACTCAGGCCCATTTTCTTTTTCTTATGTATTTATGTATTTTATTTTTTGACACAGGGTCTCGCTCTGTCGCCCAGGCTGTGGCACAATCACAGCTCACTGCAGTCTTGAATCTCCCGGGCTCAAGTGGCCCTGCCACCTTGGCCTCCCAAAGCCCTGGGATTCTGGGCCTGAGCCACTGTGCCCAGCCCCCTGGTCTGTCTGCATCCACTTGTGATTAATATCACTGAACTATGACACAGAGAGAACAGGAGCCAATGAATCTTTGTTACTTGTATAGTTTTTCATTTTGTTGTATTGACCATATTCAACATAACATTTCCTCATGCCACCAAATATTCTTCAAAAACCTAAATTTTCATTTCTGTATAACATCTTATCCTGCAAATGTACATATTTTGTTTACTAAGTCTCTTGTTAGGCACTTTATGCTGTTTCTAGTTTTTATTTTATCTTATTTTATTTTGTTGTTATTTATTGATTTTTTTGAGATGGAGTTTCGCTCTTGTCGCCCAGGCTGGAGTGCAGTGGTGCCATCTTGGCTTACGGCAACCTCTGCCTCCTGGGTTCAAGCAGTTCTCCTGCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGTGCGCCACCATGCCTGGCTAGTTTTTGTATTTTTAGTGGAGATGGGGTTTCACCATGTTGGCAAGGCTGGCCTCGAACTCCTGACCTTGTGATCCACCCAAAGTGCTGGGATTA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13707:HG3_PB_pbsv_16666:HG2_PB_assemblyticsPBcR_10684:HG4_PB_pbsv_16895:HG3_PB_assemblyticsfalcon_11030:HG4_PB_assemblyticsfalcon_10832:HG2_PB_assemblyticsfalcon_11060:HG3_PB_HySA_25590:HG2_PB_HySA_30943:HG2_PB_SVrefine2Falcon2Bionano_8371:HG2_Ill_SVrefine2DISCOVARplusDovetail_5340:HG2_PB_SVrefine2PBcRplusDovetail_4541:HG2_PB_SVrefine2PB10Xhap12_12352:HG3_Ill_SVrefine2DISCOVARDovetail_12126:HG3_PB_SVrefine2PBcRDovetail_8234:HG3_PB_SVrefine2Falcon1Dovetail_10507:HG4_PB_SVrefine2Falcon1Dovetail_10525:HG2_PB_SVrefine2Falcon1plusDovetail_4952:HG4_PB_HySA_24720:HG4_PB_SVrefine2PBcRDovetail_8497:HG2_Ill_breakscan11_4747;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5340:HG2_PB_SVrefine2Falcon2Bionano_8371;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0661704;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.254205;PBcalls=18;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=1797;DistBack=857;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=17:78056045-78056052;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2311.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:123:1/1:0:44:0:24:1/1:0:8:0:8:1/1:0:33:1/1:10:292:.:1854:.
chr17	78087615	HG2_PB_pbsv_16994	C	CACGAGGCCAGGCCGGGCGCGGTGGCTCACGCTGTAATCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCAACGAGGTCAGGAGATTCCGAGACCATTCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATATCCAAAAATTAGCCGGGCGTTAGTGGCGGGCGCCTGTAGTCCAGCTACTTGGAAGCTGGAGGCAGGAGGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCGCCACTGCACTCCAGCCTGGAGCGACAGAGGCGGAGACTCCGTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAGTTT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2040:HG2_PB_HySA_30948:HG2_PB_HySA_30947:HG2_PB_pbsv_16994:HG3_PB_pbsv_16667:HG3_PB_SVrefine2Falcon1Dovetail_10508:HG3_Ill_SVrefine2DISCOVARDovetail_12127;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_16994;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0789889;ClusterMaxSizeDiff=0.0789889;ClusterMaxEditDist=0.141538;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=328;DistBack=7380;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=17:78087616-78087615;PctSeqSimilarity=0.9622;PctSizeSimilarity=0.9604;PctRecOverlap=0.9544;SizeDiff=13;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=95;MatchId=2312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:33:0|1:21:3:2:22:./.:1:5:10:0:0/1:31:10:0/1:6:16:.:.:.
chr17	78248386	HG2_PB_SVrefine2PBcRplusDovetail_4545	T	TGGGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGTGGGGTGAGTGTGGGGAGTGAGTGGGGTGAGTGTGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGTGGGGTGAGTGGGGTGAATGTGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGTGGGGTGATGGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGCGGGGTGAGTGTGGGGGGTGAGTGGGGTGAGTGGGGGAGTGAGTGGGGTGAGTGTGGGGTGATGGGGTGAGTGTGGGGGGTGAGGGGGGTGAGTGGGGTGTCTGTGGGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGTGGGGTGAGTGTGGGGTGAGTGGGGTGAGTGGGGGGTGAGTGGGGTGTCTGGGGGGTGAGTGGGGTGAGTGGGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGTGGGGTGTCTGTGGGGGGTGAGTGGGGTGAGTGTGGGGGGTGAGTG	10	PASS	ClusterIDs=HG3_PB_pbsv_16675:HG2_PB_SVrefine2Falcon1plusDovetail_4955:HG2_PB_pbsv_17003:HG4_PB_SVrefine2PBcRDovetail_8500:HG2_PB_HySA_30958:HG2_PB_PB10Xdip_13709:HG2_PB_SVrefine2Falcon2Bionano_8375:HG3_PB_SVrefine2PBcRDovetail_8239:HG2_PB_SVrefine2PBcRplusDovetail_4545:HG2_PB_SVrefine2PB10Xhap12_12356:HG3_PB_SVrefine2Falcon1Dovetail_10512:HG4_PB_SVrefine2Falcon1Dovetail_10529:HG2_PB_HySA_30957;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_4545;NumExactMatchSVs=1;ClusterMaxShiftDist=0.144821;ClusterMaxSizeDiff=0.144821;ClusterMaxEditDist=0.273738;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=538;DistBack=13865;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=226;REFWIDENED=17:78248387-78248612;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9981;PctRecOverlap=0.9963;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=2313.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:63:1/1:2:18:0:21:./.:3:59:3:58:./.:0:0:./.:2:20:.:.:.
chr17	78254903	HG3_PB_SVrefine2Falcon1Dovetail_10513	T	TACCCCACTCACACCACTCACACACACCCCCACACCCCACTCACACCACTCACACACACCCCCACACATACCCTCCACACACACATACCCCACTCACACCACTCACACACACCCCCACACACACCCCTCACACACACCTCAACACACACACCCCACTCACACCACTCACACTCCCCCCCACACACATACCCTCCACACACACATACCCCACTCACACCACTCACACACGCCCCCACACACACACACCCCACTCACACACACCTCACACACACACACACCCCACTCACACCACTTACACACCCCCAAGACAAACACCCCATTCACACCACTCACACACCCTGCAACATACACCCCACTCACAACACTCACACACCCCCCAACATACATACACCCCACTCACACACACACCCCAACACACACATGCCCCACTCATACCACTCACACACCCCCAAGACAAACGCCCCACTCACACCACTCACACACTGCCAACACACACACCCCCACTC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10530:HG3_PB_SVrefine2Falcon1Dovetail_10513:HG3_PB_SVrefine2PBcRDovetail_8240:HG2_PB_SVrefine2Falcon1plusDovetail_4956;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10513;NumExactMatchSVs=1;ClusterMaxShiftDist=0.041791;ClusterMaxSizeDiff=0.041791;ClusterMaxEditDist=0.0636816;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=505;DistBack=60;DistForward=126;DistMin=60;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8057;REFWIDENED=17:78264608-78255472;PctSeqSimilarity=0.943;PctSizeSimilarity=1;PctRecOverlap=0.0376;SizeDiff=0;StartDistance=-486;EndDistance=-486;GTMatch=0;TruScore=66;MatchId=2314.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:22:0|1:13:0:2:14:./.:46:468:52:96:./.:4:0:0/1:2:10:.:.:.
chr17	78286167	HG2_PB_SVrefine2Falcon2Bionano_8376	G	GGGTCCGGCATGGAGGCGGGGGGAGAGCATGATGGGAGCACAGTGGGAAGGGGACCCAGGTTTACCTCCGGGTCAGGAGCCTGGCTGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8376:HG2_PB_pbsv_17005:HG3_PB_assemblyticsfalcon_11042:HG3_PB_pbsv_16677:HG2_PB_HySA_30964:HG3_PB_SVrefine2PBcRDovetail_8241;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8376:HG3_PB_SVrefine2PBcRDovetail_8241;NumExactMatchSVs=2;ClusterMaxShiftDist=0.119565;ClusterMaxSizeDiff=0.108696;ClusterMaxEditDist=0.244681;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=87;DistBack=3929;DistForward=1040;DistMin=1040;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=261;REFWIDENED=17:78286168-78286428;PctSeqSimilarity=0.9779;PctSizeSimilarity=1;PctRecOverlap=0.7126;SizeDiff=0;StartDistance=-25;EndDistance=-25;GTMatch=0;TruScore=89;MatchId=2315.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:15:0|1:23:2:1:10:./.:4:1:4:0:0/0:21:1:./.:.:.:.:.:.
chr17	78511822	HG3_Ill_GATKHCSBGrefine_11087	A	AGAGAGGGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGACCATGGGGAGAGGGAGAGGGAGAGGGAGAGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4550:HG2_PB_HySA_30975:HG4_PB_HySA_24749:HG2_PB_pbsv_17015:HG2_PB_PB10Xdip_13722:HG3_PB_pbsv_16686:HG4_Ill_SVrefine2DISCOVARDovetail_11886:HG4_PB_assemblyticsfalcon_10849:HG3_PB_assemblyticsfalcon_11054:HG2_PB_assemblyticsfalcon_11081:HG3_PB_SVrefine2PBcRDovetail_8246:HG3_Ill_SVrefine2DISCOVARDovetail_12136:HG3_Ill_GATKHCSBGrefine_11087:HG2_PB_SVrefine2PB10Xhap12_12362:HG2_PB_SVrefine2Falcon2Bionano_8381:HG2_Ill_GATKHC_26934:HG2_Ill_GATKHCSBGrefine_11160:HG2_10X_SVrefine210Xhap12_11803:HG4_Ill_GATKHC_26878:HG4_PB_pbsv_16911:HG4_Ill_GATKHCSBGrefine_11513;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11803:HG2_Ill_GATKHCSBGrefine_11160:HG2_Ill_GATKHC_26934:HG2_PB_SVrefine2Falcon2Bionano_8381:HG2_PB_SVrefine2PB10Xhap12_12362:HG3_Ill_GATKHCSBGrefine_11087:HG3_Ill_SVrefine2DISCOVARDovetail_12136:HG3_PB_SVrefine2PBcRDovetail_8246:HG4_Ill_SVrefine2DISCOVARDovetail_11886;NumExactMatchSVs=9;ClusterMaxShiftDist=0.245161;ClusterMaxSizeDiff=0.245161;ClusterMaxEditDist=0.355828;PBcalls=13;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=82;DistBack=34918;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=48;REFWIDENED=17:78511823-78511870;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2316.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:38:./.:0:0:0:0:./.:0:0:0:0:./.:2:5:./.:.:.:.:.:.
chr17	78653734	HG3_Ill_250bpfermikitraw_21814	C	CGGAGGGAGCCCCATGGTCCCTGTCCTGGAGAGGAAGACCTCCCCCAGAGTCCAGAGAGAG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21191:HG2_PB_pbsv_17021:HG4_PB_HySA_24754:HG4_PB_pbsv_16918:HG2_Ill_manta_4567:HG4_Ill_GATKHC_26882:HG3_Ill_GATKHC_26789:HG2_Ill_GATKHC_26940:HG2_Ill_GATKHCSBGrefine_11164:HG2_PB_PB10Xdip_13725:HG3_PB_pbsv_16695:HG4_Ill_250bpfermikitraw_22092:HG4_Ill_150bpfermikitraw_21283:HG3_Ill_Krunchall_22401:HG3_Ill_250bpfermikitraw_21814:HG3_Ill_150bpfermikitraw_21228:HG2_Ill_Krunchall_22825:HG2_Ill_250bpfermikitraw_22472;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21191:HG4_Ill_250bpfermikitraw_22092:HG4_Ill_150bpfermikitraw_21283:HG3_Ill_Krunchall_22401:HG3_Ill_250bpfermikitraw_21814:HG3_Ill_150bpfermikitraw_21228:HG2_Ill_Krunchall_22825:HG2_Ill_250bpfermikitraw_22472;NumExactMatchSVs=8;ClusterMaxShiftDist=0.247788;ClusterMaxSizeDiff=0.19469;ClusterMaxEditDist=0.369748;PBcalls=5;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=60;DistBack=5125;DistForward=62;DistMin=62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=115;REFWIDENED=17:78653716-78653830;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2317.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:./.:3:42:0:2:./.:0:2:2:6:./.:2:30:./.:.:.:.:.:.
chr17	78674173	HG2_PB_SVrefine2Falcon2Bionano_8388	G	GTGGTGGTGGTGATGGTGGTAGTGGTGGTGATGGTGGTGGTGGTGATGGTGATGGTGGTGGTTATGATGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGATGGTGGTGGTGATGGTAGAGATGATGGTGATGGTGATGATGGTGGTGGTGGTGGTGATGATGATGGTGGTGGTGATGGTAGAGATGATGGTGATGGTGATGATGGAAGTGGTGGTGATGGTGATGATGGTGATGGTGGTGGTGGTGGCGGCGATGATGGTGGTGGTGATGGTAGAGATGATGGTGATGGTGATGATGGAGGTGGTGGTGATGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGATGATGGTGATGGTGATGGTAGAGATTATGGTGATGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGGTGGTGGTGATGGTGATGGTGATGGTAGAGATGGTGATGGTGGTGATGATGATGGTCGTGGTGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4966:HG4_PB_SVrefine2PBcRDovetail_8507:HG3_PB_pbsv_16700:HG4_PB_pbsv_16923:HG2_PB_HySA_30984:HG2_PB_pbsv_17026:HG2_PB_HySA_30986:HG4_PB_HySA_24758:HG3_PB_SVrefine2PBcRDovetail_8250:HG4_PB_SVrefine2Falcon1Dovetail_10542:HG3_PB_SVrefine2Falcon1Dovetail_10523:HG2_PB_SVrefine2PBcRplusDovetail_4557:HG2_PB_SVrefine2PB10Xhap12_12369:HG2_PB_SVrefine2Falcon2Bionano_8388;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8388:HG2_PB_SVrefine2PB10Xhap12_12369:HG2_PB_SVrefine2PBcRplusDovetail_4557:HG3_PB_SVrefine2Falcon1Dovetail_10523:HG4_PB_SVrefine2Falcon1Dovetail_10542;NumExactMatchSVs=5;ClusterMaxShiftDist=0.226496;ClusterMaxSizeDiff=0.226496;ClusterMaxEditDist=0.328649;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=486;DistBack=630;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=496;REFWIDENED=17:78674174-78674669;PctSeqSimilarity=0.9635;PctSizeSimilarity=0.9759;PctRecOverlap=0.2725;SizeDiff=-12;StartDistance=-357;EndDistance=-357;GTMatch=0;TruScore=73;MatchId=2318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:72:./.:0:0:1:2:1/1:0:76:2:33:0/1:2:12:1/1:2:79:.:.:.
chr17	78836315	HG2_PB_SVrefine2Falcon2Bionano_8391	C	CCCTCTGTGTTGGTGATGGTCCTCCGAAGCTCCGCCCACCATGATGTCTGCTCCGCCCCCTCGTGTTGCTGGTGGTCCTCTGGAGCTCCGCCCACCATGATGTCTGCTCCGCCCCCT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5357:HG2_PB_HySA_30993:HG4_Ill_SVrefine2DISCOVARDovetail_11896:HG2_PB_SVrefine2Falcon2Bionano_8391:HG2_PB_SVrefine2Falcon1plusDovetail_4969;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5357:HG4_Ill_SVrefine2DISCOVARDovetail_11896:HG2_PB_SVrefine2Falcon2Bionano_8391:HG2_PB_SVrefine2Falcon1plusDovetail_4969;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0519481;ClusterMaxSizeDiff=0.025974;ClusterMaxEditDist=0.103896;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=116;DistBack=21227;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=220;REFWIDENED=17:78836316-78836535;PctSeqSimilarity=0.9744;PctSizeSimilarity=0.9748;PctRecOverlap=0.5126;SizeDiff=-3;StartDistance=-57;EndDistance=-57;GTMatch=0;TruScore=82;MatchId=2321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:51:./.:19:22:11:21:./.:2:0:3:0:0/1:22:3:./.:.:.:.:.:.
chr17	78981658	HG2_PB_SVrefine2PB10Xhap12_12375	A	AGGCGGAGCTTGCAGTGAGCTGAGATTGCGCCACCGCTCTCCAGCCTGGGTGACAGAGCGAGACTCTGTCTCAGAAAAAAAAAAAGAAGTGGGTATCTTTACTTCACATTTTTCTATTCCACTCCCAGCCCAAAAATACTAAAAACAGAAAGAACAAAGTCCATACAAAGAGTATTTCATGAAAAATTTAACCCACTTTTTTTCTTTCGCTTTCTTCCCTCTCCTCTTTTCTTTTTCTTGTCTCCTCTTCTTTCTCACGCAGGGCAGGGCCGGGCCAGGGTTAGCGGGCCAGGGTAAGGTCGGAGCTGCTCCAACTTCTGGTGTGTACTTGTTAGTCTTTATGATATTCTTGTAGATTCAATCATGAAACATGAGTTTGATGCTGGTGTGATTGTAGGTGGTCTTGCAGTCAGGTGAACAGTTGCTCCCAAAGAGAACTGACGGCTCAGCCTCAGCCTGGAGGGGATGTAGACCTCTCGTGACATAACTCAGTGCTGGGAGGGAAGTCAACAGAGTGAATCAAGGACAGAACCAACACTCAAAATGATGGCAAGAGTTGCAGCCAAAGCCAGCCAGATGACACACCAACAAAATACAGTAAAGCCCATAAAGGTCAGTCCTTGGCTTCAGAGAAAACCATAGTGGGCAGTGATGCATTTGGAAAATATCTGGAAACCTTGCCTGCTGGCAGACACTGTGGGTTATCTATGGGATCCAGCTGCTAACTCCATCAATGTGACCTTACACTTCATTAATGGAAGTGTCTACCTAACTGGATGTAACAGCCTCCTCACTAACTTATATTTACAGTGCTGCCCCTGTGTCAGCAGTAAAAGTTCAAATTATATTCAGAATCTTCTGCTTAATAAATTAGAAAAGTGCTGGCCAGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCTGGTGGATCACTTGAAGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTCAAACCCAGGAGGTGGAGGTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGTTGATACAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAGGAAAGAAAAAAGAAATCAGAAAAGTGCAATGGGGAAAGCATAACCATGGGTCTGACTTGTTCACTGTGTTAGCCCAGCTTCCTGAGCACTGGTTTGCACATAGAGTAGGCAGCCCCCAAAATTGGGTTGAAGAAATGAATTATCAACATTTTAAAAGTGTTTACTGGTTGAACAGGCAAACTTCAGCTATCTAGAGAATTGCCTATGCAGAGTGCATCACTCCCTGGTGATGTCAGATGGAGAGTGGCTGGAGTCTTTCTCTGTGTATTGGTCCTTCTGATGTATTTAAAACTTACATTTAAAAGCAGTTTGTTCTGCTGGGCACAGTGGCTTACACTTGTAATCCCAGCACTTTGGGAGGCCAAAGCAGGAGGATTGTTTGAGCCCAAGAATTCAAGACCAGCCTGGGCAACATAGTGAGACCCCACCTCTACAAAAAAAAAAATAGCCG	20	PASS	ClusterIDs=HG4_PB_HySA_24772:HG4_PB_pbsv_16940:HG2_PB_pbsv_17039:HG3_PB_pbsv_16714:HG2_PB_PB10Xdip_13737:HG3_PB_SVrefine2Falcon1Dovetail_10531:HG2_PB_SVrefine2Falcon1plusDovetail_4973:HG4_PB_SVrefine2PBcRDovetail_8512:HG4_Ill_SVrefine2DISCOVARDovetail_11899:HG3_Ill_SVrefine2DISCOVARDovetail_12146:HG2_PB_SVrefine2PBcRplusDovetail_4562:HG2_PB_SVrefine2PB10Xhap12_12375:HG2_PB_SVrefine2Falcon2Bionano_8394:HG2_Ill_SVrefine2DISCOVARplusDovetail_5360:HG2_10X_SVrefine210Xhap12_11817:HG3_PB_SVrefine2PBcRDovetail_8256:HG4_PB_SVrefine2Falcon1Dovetail_10548;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11817:HG2_Ill_SVrefine2DISCOVARplusDovetail_5360:HG2_PB_SVrefine2Falcon2Bionano_8394:HG2_PB_SVrefine2PB10Xhap12_12375:HG2_PB_SVrefine2PBcRplusDovetail_4562:HG3_Ill_SVrefine2DISCOVARDovetail_12146:HG4_Ill_SVrefine2DISCOVARDovetail_11899:HG4_PB_SVrefine2PBcRDovetail_8512;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0602625;ClusterMaxSizeDiff=0.0596659;ClusterMaxEditDist=0.167637;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1633;DistBack=141;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=17:78981659-78981661;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:84:1/1:0:18:0:9:./.:0:4:0:5:1/1:0:36:./.:14:233:.:1690:.
chr17	79120747	HG3_Ill_GATKHCSBGrefine_11101	T	TAAGAAAATAACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGGAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_16721:HG2_PB_PB10Xdip_13741:HG2_PB_pbsv_17044:HG2_PB_HySA_31011:HG2_Ill_breakscan11_4748:HG2_PB_HySA_31010:HG4_Ill_MetaSV_2106:HG4_Ill_GATKHCSBGrefine_11531:HG3_Ill_manta_3728:HG3_Ill_GATKHCSBGrefine_11101:HG2_Ill_GATKHCSBGrefine_11179:HG4_Ill_manta_3875:HG2_PB_SVrefine2PB10Xhap12_12378:HG4_PB_SVrefine2Falcon1Dovetail_10551;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11179:HG3_Ill_GATKHCSBGrefine_11101:HG3_Ill_manta_3728:HG4_Ill_GATKHCSBGrefine_11531;NumExactMatchSVs=4;ClusterMaxShiftDist=0.113565;ClusterMaxSizeDiff=0.113565;ClusterMaxEditDist=0.192192;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=327;DistBack=3405;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=17:79120748-79120759;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2323.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:41:0|1:26:8:1:27:./.:21:0:0:4:0/1:24:18:0/1:6:39:.:.:.
chr17	79181727	HG2_PB_HySA_31013	A	ACCCACACACCATACACAACCACATACACCACACAAACACACACACCACAAACCACACACACAACACACCACACATACACCATACACACAACACACACCACATAACACACACACCACACACATAACACCACACACAACACACCACATACACACACCATACACGCCACACACTATACACCATGCACAACCACATACCCCACACACCATACAGTGCACACACACATACACCACACACAACACATAACACACACCATACACATAACACACACACACACCATACACACCACCACACACCACAAACCAAACACACAACACACCATACACACACCACACACCACACACATAACACAACACACACACACCACATACCACACACCATACATACCGCACACTACACACCATAACAACAACCACGTACCACACACACCACATACCACACACACCACCACACTACCACACCACACCACACCACATACACCACACACCATACACACCACACACACCACACACCACACACCACATACACACACACCACACACATACCATACACACACACCACACACACCACATACACACACACAGTACACACCCACATACCATACACACCACACACACACACATACACCACATACCATACACACCACACACCACACACACACACACCACATACACACACTACACACACACCACATACCATACACCCCACACACAGACCACACACATACCACATACCACATACACACCACACGCAAACCACACACACACCACACACACGCACCACAAACCACACACACAACACACACATACCACACACACCACATAAACACACAAACCACACACACCACATACCATACACACCACACACCATACACACTACACACACACCACATACCATACACACACACCACACACACCCACACATACACACCACACAGACCACACACACCACATACCGCATACACACCACACACACACACAACCACACACACACCACACACGCACCACAAACCACACACGCCACACACATACCACACACAGACACACCACACATACCGCACACACTACATAACACACAAAGCCACACCATACACCACACACCCACCACGTACCACACCCACCCACTCCC	20	PASS	ClusterIDs=HG3_PB_pbsv_16723:HG2_Ill_breakscan11_4749:HG2_PB_pbsv_17047:HG4_PB_pbsv_16948:HG2_PB_HySA_31013:HG4_PB_HySA_24782:HG2_PB_SVrefine2Falcon2Bionano_8399:HG2_PB_SVrefine2PB10Xhap12_12380:HG4_Ill_SVrefine2DISCOVARDovetail_11904:HG2_PB_SVrefine2PBcRplusDovetail_4567:HG4_PB_SVrefine2PBcRDovetail_8517:HG2_Ill_MetaSV_2049:HG2_PB_SVrefine2Falcon1plusDovetail_4978:HG3_PB_SVrefine2Falcon1Dovetail_10534:HG4_PB_SVrefine2Falcon1Dovetail_10553;NumClusterSVs=15;ExactMatchIDs=HG2_PB_HySA_31013;NumExactMatchSVs=1;ClusterMaxShiftDist=0.233222;ClusterMaxSizeDiff=0.231318;ClusterMaxEditDist=0.284553;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1125;DistBack=25;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=200;REFWIDENED=17:79181728-79181927;PctSeqSimilarity=0.9736;PctSizeSimilarity=0.9822;PctRecOverlap=0.9822;SizeDiff=20;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:72:1/1:0:16:1:13:./.:24:47:33:70:./.:1:17:1/1:8:245:.:.:.
chr17	79251873	HG2_PB_SVrefine2PB10Xhap12_12384	G	GACCAGCACAGCGGCCAGCGGAGCCAAATCCCAAACCGCCTTGAAGAAAGTGAAAGAAAACACAGGACATC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12384:HG2_PB_HySA_31023:HG4_PB_pbsv_16952:HG4_PB_HySA_24785:HG2_PB_pbsv_17050:HG4_Ill_SVrefine2DISCOVARDovetail_11905:HG4_Ill_250bpfermikitraw_22114;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12384:HG4_Ill_SVrefine2DISCOVARDovetail_11905:HG4_Ill_250bpfermikitraw_22114;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0839161;ClusterMaxSizeDiff=0.0699301;ClusterMaxEditDist=0.30137;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=2638;DistForward=29288;DistMin=2638;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=140;REFWIDENED=17:79251874-79252013;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:24:0|1:23:0:3:23:./.:0:1:4:0:0/1:18:12:./.:.:.:.:.:.
chr17	79281238	HG2_PB_PB10Xdip_13753	T	CTTCCCCTCCCCCTCCCCTCCCCTTCCCCCTTCCTCTTTCCTTTCTCCTCCCCTTCCCCTCCCCCTCCGCCTTCCCCTCCCCTTCCTCTCTCCCTTCCCCTTCCCTTTCTCCTTCCCTCCCCCTTGCCCTTCCCCTTCCCCTTCCCTTTCTCCTTCCCCTCCCCTTCCCCTTCCCCTCCCCTTCCCTCCCCCTTCCCCTTCCCCTTCCCCTCCCCTTCCCCTCCCCCTCCCCCTTCCCTTTCCTTTCTCCTTCCCCTCCCCGTCCCCCTTCCCCTTCCCCTCCCCCTTCCCCTTCCCCTCCCCTTCCCCTCCCCCTCCCCCTCCCCCTTCCCTTTCCCTTTCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12385:HG4_PB_assemblyticsfalcon_10888:HG3_PB_assemblyticsfalcon_11088:HG4_PB_SVrefine2Falcon1Dovetail_10556:HG2_PB_pbsv_17051:HG2_PB_HySA_31024:HG2_PB_PB10Xdip_13753:HG4_PB_pbsv_16953:HG2_PB_SVrefine2Falcon2Bionano_8401:HG3_PB_SVrefine2Falcon1Dovetail_10536:HG2_PB_SVrefine2Falcon1plusDovetail_4980:HG2_PB_SVrefine2PBcRplusDovetail_4569:HG4_PB_SVrefine2PBcRDovetail_8519;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_13753;NumExactMatchSVs=1;ClusterMaxShiftDist=0.125915;ClusterMaxSizeDiff=0.125915;ClusterMaxEditDist=0.281113;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=343;DistBack=40;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=94;REFWIDENED=17:79281163-79281256;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9856;PctRecOverlap=0.9828;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=98;MatchId=2326.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:1/1:2:24:2:15:./.:0:4:0:2:./.:0:2:./.:2:9:.:.:.
chr17	79310215	HG2_PB_PB10Xdip_13754	C	CCATCCATCCACCCCCCCACCCACCCATCTATCCACTCCCCAATCCACCCATCTATCCACCCATCCACCCACCCATCCACCCACCCATCTATCTATCCACCCATCCACCCACCCTTCTATCCACCCCCACCCATCCATCCATTCACCCTTCCATCCAAGAATTCACCCATCCATCCATCCACCCACCCACCTACCCATCTATCTACCCCATCCACCCCACCCATCCACCCACTCATCCACCTGCCCATCTATCCACCCACCCATCCATCCACCCGTCCACCCATTCACCCCATACTCCATCCACTTACCCATCCACCCATCCACGACATCCACTCATCCATCCACCTGTCCACCTATCCACCCATCCACCAATCCACCCATCCACCCATCCACCCATCCAACCATCCAACCATCCAGCCAGCCATCCACCCATCCAAACATCCAGCCATCCAACCATCTACCCCATCCAACCATCCACCCATCCAACCATCCAGCCATCCACCCATCCAGCCATCCACCCATCCAGCCATCCACCCATCCAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10537:HG4_PB_pbsv_16954:HG4_PB_HySA_24789:HG3_PB_HySA_25649:HG2_PB_HySA_31026:HG2_PB_PB10Xdip_13754:HG4_PB_HySA_24788:HG2_PB_HySA_31025:HG4_PB_SVrefine2PBcRDovetail_8520:HG3_PB_pbsv_16727:HG2_PB_SVrefine2PB10Xhap12_12386:HG2_PB_pbsv_17052:HG2_PB_SVrefine2Falcon2Bionano_8402:HG2_PB_SVrefine2PBcRplusDovetail_4570:HG2_PB_SVrefine2Falcon1plusDovetail_4981:HG3_PB_SVrefine2PBcRDovetail_8261;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_13754;NumExactMatchSVs=1;ClusterMaxShiftDist=0.254689;ClusterMaxSizeDiff=0.248031;ClusterMaxEditDist=0.317868;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=541;DistBack=54;DistForward=8540;DistMin=54;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=193;REFWIDENED=17:79310106-79310298;PctSeqSimilarity=0.9774;PctSizeSimilarity=0.9575;PctRecOverlap=0.9575;SizeDiff=-24;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=2327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:3:18:0:23:1/1:2:23:0:20:./.:0:7:./.:4:55:.:2885:.
chr17	79326402	HG2_PB_SVrefine2PBcRplusDovetail_4571	C	CAATCGCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGGCCATCCTGGCTAACACGGTAAAACCCCGCCTCCACTAAAAATATAAAAAAATTAGCCGGGCGTGGTGGCGGGTGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGGACAATGGCGTGAACCCGGGAGGAGGAGCTTGCAGTGAGGCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGGGGGACTCCGTCAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAGAAATAAGCTTAGGAAGATACTTTCCAAAACTCCACTAGATATCTTGGGAAATTAAAACTTGGGGCATTGAAACAGGAAATCCTCAAATCGATGGGTCTCAGCTGAGCCCGAGTGAGTGGGCTGGGAGGCCCAGCTGGAGAATTCAGTGGAACACAGGTCACAAGGCAGAAAGGTTATAATGTGTGAAGGAAAAGTTCAGAAACATGGAAAACAGGCCCAGAGTTTTCTCCATCCACTTAAATGGAATTCCAGGGGAGAGGGAACGGGAGGGAGAGAATGTTAAAGGAAGCGAAGAAAGAAAACTGCCCAGGGCCAAAAAGACACTTGAAGACATTTCAGGACACAGAGAAAAAAGAGAAAAGCGTCCAGTGGGGGAAAAGCCTGTGAGTTAAAAAATAAAAAAATTAAAAAAAGACAAGAAGAAGAAGGGGAGAAGGAGGAGGAAGAGGAAGAAGAAGAGGTGGAGGAGGAGGAAGAAGGAAGAAAGGAGGAGGGGAAGGAGAGAGGAAAAAGCCTGTATCTGACATCATGCATTGTCAACCTGGGCTTCAGACACTGCGGAGGGGGCACCTTCACGGTTCGGAGGGAAGATTTGGAGGCTCTAATTCGCTGCCAGGCCCAACAGCCATTCCGTGGGGAGGAAGAACAAACACTGTTTTGGTCATGCCAAGTGCTCAGAGTTTCTTTTCAACAAGTACTATCTGAAATCATTACTAGATGAGGTACCCTAGCAAAATAAAACACAATGCCAAGAGGGAGACGAGGGATACATGGGCCGGCGAGGGGCTTCATGTTGGAAACGCTCACAACTGTCTGCAAGGAGGCTCTGGATGATCCCAGCATAGGCTGTGGGAGGGGAGGAGGAGGGAGGGAAAACCGCACAGCTGCCGCGTCTTTTCAGAAGGAATCATGTAGGACTGAGGAACTCTGGACGGCGGTAGGAAGAGGGAAGTAAAGTGCACATGTTAAACATTTAAAATAACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGAGAGCCCGAGGTGGGCGGATCACTTGAGGTCACGAGTTGGAGACCAGCCTGGCCAAGATGGTGAAATCTCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGTCGGACGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATCATTTGAACTGAGGAGGCGGAGGTTGCAGTGAACCAAGATTGTGCCACTGCACTCCGGCCTGGACAAGAGTGAAACTCCATCTCAAGACAAAAAATAAAATAAAATAAAAAATAAAGAATTTAATGTCACCACTAGATGAATAGAAATATGTAAACCTTCCAAACCATTAGAGGAAAAAAGTTGAACAGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTGGGGAGGCCTAGGTGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGATGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTAGTGATATGCGCCTGTAATCCCAGCTGCTTGGGAGGCTGAAGCAGGAGAATCTCTTGAACCCAGTAGAGGTTGCAGTGAACCAAGATGGCGCCATTGCATTCCAGCCTGGGCAACAAGAGCAAGACTCTGTCTCAAAAAAAAAGAAAAAAAGAAAAAAATGGAACAAAGAAGACTTGATGAATCTAACAAAAGCAGGAAATGGGGGCTGTCAGGGGGACAGGAACAGCAAAAAAATGCAGCAACTAAAACCCCAGAGCTAAATGCCAGGAGCAGGCCCCATATGGAGTCATCACAACAAATGTGAGCAAATCAAAGTCATGCATGAAACAGCAGATACACACTTTTTAGATACAAATTCACAATCCACACGCCCACTGTCACTGAGGCCAACCCCAACCACTGCCCACCCCACATGCTGGCCCCAGCCCGGTGTCCCTAACCCCACAGAAAGACCTCAGGCGGGAAGTTCATGGGAGAGCCAGAGGGTACGTGGAATTGAATAGGACAACATAATCATTTTTAAAAAATTATTTGGGGTCTGGGCGCCGTGGCTCACGCCTGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8403:HG2_PB_pbsv_17053:HG4_PB_pbsv_16955:HG2_PB_HySA_31027:HG2_PB_PB10Xdip_13755:HG4_PB_HySA_24790:HG2_PB_SVrefine2PB10Xhap12_12387:HG3_PB_SVrefine2Falcon1Dovetail_10538:HG4_PB_SVrefine2PBcRDovetail_8521:HG4_Ill_SVrefine2DISCOVARDovetail_11906:HG2_PB_SVrefine2PBcRplusDovetail_4571:HG2_10X_SVrefine210Xhap12_11826;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11826:HG2_PB_SVrefine2PBcRplusDovetail_4571:HG4_Ill_SVrefine2DISCOVARDovetail_11906;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0490237;ClusterMaxSizeDiff=0.0481928;ClusterMaxEditDist=0.144513;PBcalls=10;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=2377;DistBack=7554;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=284;REFWIDENED=17:79326403-79326686;PctSeqSimilarity=0.999;PctSizeSimilarity=1;PctRecOverlap=0.9764;SizeDiff=0;StartDistance=-56;EndDistance=-56;GTMatch=0;TruScore=99;MatchId=2328.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:36:0|1:24:2:0:26:./.:0:4:7:0:0/1:22:18:0/1:59:158:.:2885:.
chr17	79399873	HG2_PB_SVrefine2Falcon1plusDovetail_4982	C	TGGTGGTGATGTGGTGGTTGATAATTGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGGGTGATAGTGGTGGGTGATGTGGTTGGCGGTGATAGTGGCGGGTGATGTGGTTGGGGGTGATACTGGTGGGTGATGTGGTTGGTGGTGATGTGGCTGGTGGTGGTGGTTGTGGGTGATGCGGTTGGTGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGTGATGTGGTTGGTGGTGATAGTGATGGGTGATGTGGTTGGGGTGATGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTAATGTGGTTGGTGGTGATGTGGTTGGTGGTTATGTGGTTGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTTGGGTGATGTGGTTGGTGATGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTCGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTCGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTAATGTGGTTGGTGGTGATGTGGTTGGTGATGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGTGGTAATAGTCGTGGGTGATGTGGTTGGGGGTGATTGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTCGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTCGTGGGTGATGTGGTTGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGCTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTAATGTGGTTGGTGGTGATGTGGTTGGTGTGATGTGGTTGGTGGTTATGTGGTTGGTGATGTGGTTGGTGGTGATAGTGGTGGGGTGATGTGGTTGGTGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATGTGGTTGGTGATGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTCGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTCGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTGGTGGTGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGGGTGATAGTGGTGGGTAATGTGGTTGGTGGTGATGTGGTTGGTGATGATGTGGTTGGTGGTGATAGTGGTGGGTGATGTGGTTGGTGGTAATAGTCGTGGGTGATGTGGTTGGGGTGATTGTGGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTCGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGTGGTGATAGTCGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATGTGGTTGGGGGTGATGTGGGTGATGTGGTTGGGGGTGATAGTGGTGGGTGATATGGCTCGTGGTGGTGGTGGTGGTGATGTGCTTGTGACAAAGATGTCGTTCTTGGGTTTGCAACAGCAGGAGAGTGTCAGTACCAGGACACCTGGGGCACCAAAAGACTCAGGACTCTGAGTGTGGCAGTCAAAGGCATATGGGGGTAACCTTTCCCATCATCGGTTTCTTGGATATTGAAAGTCAAAGGCTCTGGGGGAGATTGGGGCCTGAGAGTCCCCTGTGGAGAAGGGCTGTGGTGTTGCCCCTGCCCTGCCTCAGGCCACACCCTGGGAGCTGCCCCCAGAGTCACTCTTGCCCTGTGTCCACAGCCAGCAGCCGCCTGATGGGAAGTTCTCCGGCCTCCTCGTTCATGGGCAGTTTCCTCACCAGCAGCCTGGGCTCGGCAGCCTCCACGCACCCCAGCGGCCCCAGCTCCTCCCCCCTGAGCAGGCCTACCGTGGCTCCCACCCCCCACCTCCCAGATCTGGTTCTCCCACTCCCACGAAGGTAAGTTGGCGGACTGGGCTCCCAGCGACACCCTGGTGGCCAAGAGACTGACCCTGGTGCCCGGGCCAGGGGCAGGTGAGGGGCTCCCATCGTGGCCGTGGGAACCTGGCCGGTGGACGGTGACAAGCAGGCTCGGGTGAGGCTGCCTCCCTGCCGAGGAAGCCCCGGGGGAAGTGGTGATTGGTTGGAAACAAGGGCAGCCTGTTCGGCAGTGGTCCTGGCCAGATGTGTGCTCCAGATGGGCAGCAAGGGGAAACAGGGGGGCCAGGAGGGGCTCTGGGGAGCTGAGAAAATGTGGAGCACAGCTGGGCCGGCCGGGCTGGGCTCACCCTCACAGTGGCCGTGCCCCACCTCCCCAGACGCTAGGAGGCGGGCTCCAAATGTGCCAGCTGGAGGAGGGGGCCGGGGCGGGGAGCTGTCAGCGCACACAGGCTGCCACCCAGGGGCCTGTCCCAGGACAAAGAGTTCCTCCCAGGCCACCTGCCTCCCCGTGGGACACAGCCCTGGGCACACAGTAGGTGCCTCGCGAATACTGGCTACTCTCAGGCTGCCTGGCCAGCAGGAGACTCCTGGAGGCCCCCCTGGCCTTTCCGTGGCAGGGCACCCCTGCCTGGATCCCCGTGCTTGCTCAGACCCCTTGCCCTGCAGCCTAGGAGGCGGCCCTGGGCCCCCATGTCCTTGGGCCCACAGTTGCTGGTATTCCCTCGGCCACCCCAACCCTACAGCGTGGGAAGGGTTAAGCTCCCCCCGCCCCCCGCGGCTGGCACGCAGAGAGGTAATTGCAGTTGGCAGCGGGCACACAGGGCTCTCCGCTCCTGGCACCCAGCACTGCCGTAACTCAATGACTGCTGAGCGGCGGGGCGTCGTGTTTACAGAGCGCCGCGGACCCACACACCACGCCACCGCCCCGTTCCAGGCAGGGAGATTAGCACCCGGCACTGCTGGAAGCAGAGAAACCTCTCTTTGTGCAACAAGAAAGGGGCTGTTTTCCAAACAGAACAGGTGACGAGTGAGGGACAGTTGCTGAAATAATCTGGGCTTTCGGCTCAGGGCGCACATGTTGGGCAGGCGATAAGGAGTGGCCTCTTCCTGGGTGCAGGGGAGGCCGCTACCTTGGGATGCGGTGGGCAGCATGGGGTCCTCGGTCCAGACTCCCCTGCCCAGACTCCCCTGCCCCTTCCTCCCACCCCTGCATTACTAGCGGCCTCCTGGAGGGGAGACCAGGCTGGCCATGGCTCCTGGGCTGGCTGTGGGGGCCCCGCCTTCCTGGCTCATATGCCCCACCCCGCCTCAGCCTTTTGTGTCTGTGGGCAAACGCCCCGGCCAGCCACAGCATCTGGCTCCCAGGATGTCTGTGGAGGGAGGAGGGTGGCCTGGCACCGGGGGAGCAGGAAGGGGAGGCCTGCGGCAGCCGTGGTGAACCCCCCACAACAGACGCAACGGCCGCTGCCTGGTCCTGGCCCAGCCACAGGTGCACAGATCCACCTAGGACCACTGACTTGGTTTCCCCTCCTGGCAGTGGTGGCCCCTAGTCAGGGCCCAGAAGTGGCACCAGCCCATCCCCAATGCTCTCTGCACCAGGAGAGAGCTCCTACCCCACTCCCTCCACCCACCCTGGGGGACCCCAGCAGCAAGGAGGGCCGTTTGTGGGTAGCACCACCTGCCTTGGAGCCCCCGTCCCGCCCCTCTGGGGGCTGCTCAGAGGGTGGGTGTGTGGTGCCCACAGGCAGACAGCACCCACAACGGCCTCTAGACACTCACTTCCCCTTGTGCCAACGGCTGCCTGGGCGGAGCTGCCCACATCCCCCCGGGGACCCCCACCACTTCTCAGCCCCTCACATGGGGCCCGGCATCGGTGGGTTCCATCTGCTCCCGAGCCCTTGGGAGTCCCCCTGGCTGGGTGGGAAGCCAATGTCCTGCCACAAGTGTCGACGTGAGCCCCTGGCGTCTGGGCCTCTGAGCCCCTTCTATCTGCGTCCCAGGGAAGTAGCTCCTCCAGGCGGGGGTGGCCTGAGCCGGAGGAGAGGACAGTGCCCACAGTGGCCCTGGCTGTGTCACACCGAGGAGGTTCACCTGTCCACCCTGCTGGGCACCTGGCACCCTGGCTGGGCGAGACGCATCTCCCGCTGTCCGTGTCAGGTGGGGTGGGCACGTGTGCGGGACAGTGGGCTGGGTGGACCAGCACGGGTGGAGGCGGGACAAGGGGGTGCAGGGCGTGGCCTCTGAGCCGCCCGCCTGGGCCCCAGAATGCAAGGCCCACCCGGGGCTGAGGATGGGTGTGGGTGCCCCCCGAGGGTGGCAGAGCCTCCAAGGCCACACACCTGCGAGGCCCGTGCTCCAGCTTGCTGTCCCCTGCTCTGCCTTCAGTTCAGTTGTCCCACCCCCCGGGATCCCCTCCCCTCCCTGCGGGGGTTCCTGCCACGCAGCCGTGCTCCCCGACAGACCACATGGAGCTGCCGCGCTGTGAGCTGAGCGGCAGAGGCCAGGGCCGGCGGGCCAGGGTGAGAGGCTGGCTGGCTGCCCGGGCAGCATGCCTGGCTGCTAGTTTGACAGGGTGCCAGCTGGCTCCCCGTGCGCCGGGCCTGTTTCTCTGCCGTGTGTGTTCATGGGGGAAGGGGAGTGAGGTGGGTGGGGGGCACGCGACTCGGCCGGAGAGTGGGGGCCAGCAGGCACAGCGGGCTGCCTGGGCGGTTGGCCTTGCCCACGTTTCCTCCTAGTGGCCCAGGATGGGCAGGAGGCAGGTGCCTGGCCAAGCCAGCTTGCCACCCCTCCCCAGCCCAGGGCTTTCGTTGAGGGTAGGTAGGCCAGGGTGGGGCAGGCCACCAGGAACCCAGGTTGGGGTAGCCCAGGAACCCCCCATGCCAAGCGGGGCCTCCTCTCTCCCCATCTGCAGGGCAGCCCCTCGAGCGGGCCAGGGCTTCCTGCTTCCCCGGGGGAGCAGCTGGGGGTGCAGCAGAGGCAGCCCGGAGCTGGAGGAGCCGCCCGGAACATCTGGCCTGGGCAGAGCCTGTCTGTTCAGCTCCTCCCGGCCCGCAGCTTACCCGAGGCTCGCGCTCCCACCAGCGGTGGGCCTCTCTGGGGCTTGGGGTGGGGGCGGGAGGCGGAACTGGCCAGGGGCAGAGGTGAGCTCCTGCTGGGCAGCCTGTCCTGGGTGGATGAGGATGAGAGCAGGGGTGGGGCACACACAGCTGGCCCTATTGTCAGCAGGCCTGGTCCCCTCCCTCCCCACCGCGCCCCCAGCTGCCTGGCCAGGACCACCCACAGGGCCAATGAAAGAGGATTCTGTTCCTGGGGGGCTCAGCTGGGAAGGGGTGGGGGCAGGGGCTGCTGAGATCCCACTGAGGCCACTCGTGGTCTCTTGTGCCACCTGGGGGGAGCCATGGGGCGGCAGGCACACACACGCGCTGGCTCTCCGCCTGGCCGGCCTCTTGGTCAGAACCACGCCCCACCAGCGGCCACTTCTCACTGGGCCTGGCCAGCTCCTGGGGGTCCGGGGCTACGCATGCCGAGCACTCCCTGCCAACGGAGCCCCGCAGCTTCCTGCATCCTGCCAGCTGCTCCTCTGTCCCCTTCGTCCCCTCTGAGGTCTCAGGACTCGCTGGTGCTGCTGGGAGTGAGCAGGAGCTGGGACCACATCTGTTTAAGGGACAGAGGTCCCACCAGCGCCCACCCACCCCGAGTGTCCTCAGAGGTACTGGGGCCCCAGCTCCATCCTTCCTGTGATGCCTGCCAGGGACCTGCTGCTTCCTCCCAGACCCCTTCAGCTCCTCCTTCCTCTCCCGGCCTCGGTTTCCTCGGTGGCTAAAACAGCTTCTTGGTCTGTCTCCCACAGGCCCGCTGACCACCCCAGCACTGACGTTTCTACCACATCTATGTGGGGGGTGTGGCCCTTGCCCTGCCTAGACCTGCTGTCCCTGCCCATGTGCGAGGGAGAGTTGGGCCAGTGGGGACAAGCTGGCTCCGCTGGGATGCGAGGGACAGCGTGGGGGTCCCGGCGTGGGGGTGGAGGGGACAGCGTGGGGGTCTCGGCGTGGGGGTGGAGGGGACAGCGTGGGGTCCCGGCGTGGGGGTGGAGGGGACAGCGTGGGGATCCCAGCGTGGGGGTGGAGGGGCTCTGCTGGGCCGGCTACCTCCCGCCAGCTTCTCTCAGCCAGAGGGCGGCTGCCCCATCCAGGCCTATGATCCCCCCTCCGGAGGTGTCCTATGGCTTTCGGGAGCCAGCCCTCCCATACCCTCGGCCCCTCACCGTGGCCTGCCCTGGCCGGCACCCTGCCAGGGTCCCAGCCTCCTGTCCCCACTGGAGTCTGCCCTCAGGCCCTGGCAGTTCCCAACCCCCAGCCCGCTGAGACTTTATGCATAGCCTCATGTTCACGGCCTGGCTGAGTGCTGCCAGTCACTGTTGAGTGCAGGGGTTTCATCCCGTGGCCATGGTGACCAGCACCCAGGTCCACACCTGGCAGAGGGCTGTATGGAGGTGGCTAGGGGAGACACAGACTTGGGGAAGCCAGGATAGGGACATCCCAGGTGGCAGAACCTGAGCCCCAGGGAGGTTGGGGAGAGGGCCACCCCTGGTTTGGATAAAGGGCCTGGTCCCTGCAGCTTCAGGGTTCCCAGGACCAGCCCTGGCTTGAGGTTGGGCAGGATGACTGCACTTCTGTTATGAGCCTGGCCCTGGGATGGCACCTGCCTCCCCCTGGCAATGCTGCACAGCACAGTGGTGCTTGCGCCCATTTTACAGCTGAGGAAACTGAGGCTGAGGATTGTGTGTGACTGAGAGCCTGTCCCCTCATCCCCTCCCTGCCCTCTGACCTGCCGTGCTTTGGAGTAGGTGTACCCTCTGCCCCGCAAGCTCCTGCTCTCCAGGAGCCAGGGACTTAGCCAGGGACTTGGGCTAGAGGCTGCTCTGGGACCCAGGAGGCTGCACCCGAGCCCCTGCGCACACCCAGGCACCGCAGGACAGGGCAGGACTGTGGCAGATGCGGCATGGGCCCCTGCTATGTGCAGGGCAGGTGGGCAGGGCAGGGTCGTCACAGACCCAGAGCTGTCTTAGCTTCGAGTTCATATGCCCAGCCTCAGTTTCTCTATCTGCCACACCCATGAGAACAGCTGTCCAGACCCCATGTGATACAGACACAAAGAGCAACTTCCCTCCCGTGTCCTGCAGCGGCTGTCCACTGCTGGGGCCAGTGGCCTTGGTCACTGGGGATGGGGTGCGGCCTTCCTAGGCTGACATCCCTGGATCTGACCGATGGTGCAGCCGCCCCGGCAGGTGCACCGTCTCCTGTGTGCCTGTGTGTGGGGCTGGCTGGTGTCATGCCTGTGGCCCCGGTACAATGACCTATGTGTCAAGGACGCTGCCTGGGGAACGTGAGGAAGGTCCTGGTGGACAGGCGGAAGGGAGTTCCCTGGTAGCCAGAGCTGATGTCCAGGGTGCCGGCGAAGGTTTTGGGGGTCGTGTGGTTGCTTCTAGCTCCACGCTCCGAGAACTGTCCATTGCCCCCTGTGGCTTGAGGGCGGCCCCAGCCTCGGACCCACCCTCCCACCCATCACCAGGCCCACCCTCCCTCCCATCGCCGGCCCACCCTCCCCTCCAGCCCTGGACCCAACCTCCGTCCCCAGCCCTGGACCCACCCTCCCGGGCCCACCTGTTCCCCTGAGCCCCAGACCCCATCCCTCCCATCCCCGGGCCCACCCTCCCCCGCATCCCCAGGCCCACCCTCCCCGCCATCCCCAGGCCCACCCTCCCCCCATCCCCAGACCCACCCTCCCCCCGAGCCCCAGACCCACCCTCCCTCCCATCCCCAGGCCCACCCTCCCCCACATCCCCAGGCCCACCCTCCGCCCCATCCCCAGGCCCACCCTCCCCCCCCAT	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_13757:HG2_PB_SVrefine2Falcon1plusDovetail_4982:HG3_PB_SVrefine2Falcon1Dovetail_10539:HG4_PB_SVrefine2Falcon1Dovetail_10557:HG2_PB_SVrefine2Falcon2Bionano_8404:HG2_PB_SVrefine2PB10Xhap12_12388;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4982;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0582524;ClusterMaxSizeDiff=0.056172;ClusterMaxEditDist=0.0746648;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=8487;DistBack=0;DistForward=890;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=17:79399874-79399872;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9968;PctRecOverlap=0.9967;SizeDiff=-27;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:./.:0:0:0:0:./.:0:0:0:0:./.:0:0:1/1:0:262:.:8543:.
chr17	79967461	HG3_Ill_Spiral_17409	G	GGGGGCGACTGAGGCACAGCTCTGACGGGGCCCCCCTGAGGTCTACGGATGGGACGTA	20	PASS	ClusterIDs=HG4_PB_pbsv_16964:HG4_Ill_svaba_20986:HG2_PB_pbsv_17061:HG4_Ill_GATKHC_26923:HG4_Ill_GATKHCSBGrefine_11541:HG4_Ill_Cortex_1462:HG4_Ill_250bpfermikitraw_22125:HG4_Ill_150bpfermikitraw_21309:HG3_Ill_svaba_21248:HG3_Ill_manta_3732:HG3_Ill_Spiral_17409:HG3_Ill_GATKHC_26842:HG3_Ill_GATKHCSBGrefine_11110:HG3_Ill_Cortex_1523:HG3_Ill_250bpfermikitraw_21855:HG3_Ill_150bpfermikitraw_21261:HG2_Ill_svaba_21035:HG2_Ill_SpiralSDKrefine_7028:HG2_Ill_GATKHC_26992:HG2_Ill_GATKHCSBGrefine_11190:HG2_Ill_Cortex_3557:HG2_Ill_150bpfermikitraw_21222:HG2_Ill_breakscan11_4750;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21222:HG2_Ill_Cortex_3557:HG2_Ill_GATKHCSBGrefine_11190:HG2_Ill_GATKHC_26992:HG2_Ill_SpiralSDKrefine_7028:HG2_Ill_svaba_21035:HG3_Ill_150bpfermikitraw_21261:HG3_Ill_250bpfermikitraw_21855:HG3_Ill_Cortex_1523:HG3_Ill_GATKHCSBGrefine_11110:HG3_Ill_GATKHC_26842:HG3_Ill_Spiral_17409:HG3_Ill_manta_3732:HG3_Ill_svaba_21248:HG4_Ill_150bpfermikitraw_21309:HG4_Ill_250bpfermikitraw_22125:HG4_Ill_Cortex_1462:HG4_Ill_GATKHCSBGrefine_11541:HG4_Ill_GATKHC_26923:HG4_Ill_svaba_20986;NumExactMatchSVs=20;ClusterMaxShiftDist=0.147541;ClusterMaxSizeDiff=0.131148;ClusterMaxEditDist=0.288;PBcalls=2;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=10764;DistForward=21;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=271;REFWIDENED=17:79967455-79967725;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2330.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:20:0|1:26:7:2:12:./.:2:13:4:0:0/1:14:6:./.:.:.:.:.:.
chr17	80554355	HG3_Ill_250bpfermikitraw_21869	T	TTGCCCTGGTGCCCTCGTCACGCCCCGGGACCGTGCACACGTGGGGACTGTTTCCAGACGCACTTTC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11856:HG3_PB_pbsv_16756:HG4_Ill_svaba_21004:HG4_PB_HySA_24817:HG3_Ill_svaba_21266:HG3_Ill_scalpel_16253:HG3_Ill_manta_3738:HG3_Ill_Krunchall_22446:HG3_Ill_GATKHC_26860:HG3_Ill_GATKHCSBGrefine_11124:HG3_Ill_250bpfermikitraw_21870:HG2_Ill_svaba_21055:HG2_PB_pbsv_17080:HG3_PB_HySA_25689:HG2_PB_HySA_31074:HG2_PB_PB10Xdip_13785:HG4_Ill_manta_3881:HG4_PB_pbsv_16982:HG4_Ill_SVrefine2DISCOVARDovetail_11917:HG4_Ill_Krunchall_23162:HG4_Ill_GATKHC_26939:HG4_Ill_GATKHCSBGrefine_11550:HG4_Ill_250bpfermikitraw_22137:HG4_Ill_150bpfermikitraw_21319:HG3_PB_SVrefine2PBcRDovetail_8272:HG3_Ill_SVrefine2DISCOVARDovetail_12159:HG3_Ill_Krunchall_22445:HG3_Ill_GATKHC_26859:HG3_Ill_GATKHCSBGrefine_11123:HG3_Ill_250bpfermikitraw_21869:HG2_PB_SVrefine2PBcRplusDovetail_4582:HG2_PB_SVrefine2PB10Xhap12_12399:HG2_PB_SVrefine2Falcon2Bionano_8412:HG2_Ill_scalpel_15912:HG2_Ill_SVrefine2DISCOVARplusDovetail_5379:HG2_Ill_Krunchall_22862:HG2_Ill_GATKHC_27012:HG2_Ill_GATKHCSBGrefine_11203:HG2_Ill_250bpfermikitraw_22519:HG2_Ill_150bpfermikitraw_21234;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11856:HG4_Ill_manta_3881:HG4_Ill_SVrefine2DISCOVARDovetail_11917:HG4_Ill_Krunchall_23162:HG4_Ill_GATKHC_26939:HG4_Ill_GATKHCSBGrefine_11550:HG4_Ill_250bpfermikitraw_22137:HG4_Ill_150bpfermikitraw_21319:HG3_PB_SVrefine2PBcRDovetail_8272:HG3_Ill_SVrefine2DISCOVARDovetail_12159:HG3_Ill_Krunchall_22445:HG3_Ill_GATKHC_26859:HG3_Ill_GATKHCSBGrefine_11123:HG3_Ill_250bpfermikitraw_21869:HG2_PB_SVrefine2PBcRplusDovetail_4582:HG2_PB_SVrefine2PB10Xhap12_12399:HG2_PB_SVrefine2Falcon2Bionano_8412:HG2_Ill_scalpel_15912:HG2_Ill_SVrefine2DISCOVARplusDovetail_5379:HG2_Ill_Krunchall_22862:HG2_Ill_GATKHC_27012:HG2_Ill_GATKHCSBGrefine_11203:HG2_Ill_250bpfermikitraw_22519:HG2_Ill_150bpfermikitraw_21234;NumExactMatchSVs=24;ClusterMaxShiftDist=0.12766;ClusterMaxSizeDiff=0.12766;ClusterMaxEditDist=0.368794;PBcalls=11;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=15;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=66;DistBack=-1;DistForward=67;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=69;REFWIDENED=17:80554356-80554424;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:41:1/1:2:24:1:12:1/1:1:13:0:6:1/1:0:38:./.:.:.:.:.:.
chr17	80589465	HG4_Ill_GATKHCSBGrefine_11552	G	GGACTCATTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10549:HG2_PB_assemblyticsfalcon_11148:HG2_PB_pbsv_17083:HG3_PB_pbsv_16759:HG4_PB_pbsv_16984:HG4_Ill_MetaSV_2115:HG4_Ill_GATKHCSBGrefine_11552:HG3_PB_HySA_25691:HG3_Ill_MetaSV_2196:HG3_Ill_GATKHCSBGrefine_11127:HG2_Ill_GATKHCSBGrefine_11205:HG3_Ill_manta_3740:HG2_PB_SVrefine2Falcon1plusDovetail_4990:HG2_PB_PB10Xdip_13787:HG2_PB_SVrefine2PB10Xhap12_12401:HG4_PB_SVrefine2Falcon1Dovetail_10567:HG3_PB_SVrefine2PBcRDovetail_8274:HG2_PB_SVrefine2Falcon2Bionano_8414:HG2_10X_SVrefine210Xhap12_11858;NumClusterSVs=19;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_11552:HG4_Ill_MetaSV_2115;NumExactMatchSVs=2;ClusterMaxShiftDist=0.17094;ClusterMaxSizeDiff=0.167521;ClusterMaxEditDist=0.283388;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=305;DistBack=-11;DistForward=6591;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=315;REFWIDENED=17:80589162-80589476;PctSeqSimilarity=0.9984;PctSizeSimilarity=1;PctRecOverlap=0.9902;SizeDiff=0;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=99;MatchId=2332.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:39:0|1:15:3:1:29:0|1:21:0:0:9:0/1:21:14:0/1:6:35:.:.:.
chr17	80597795	HG4_Ill_GATKHC_26941	T	TGGGCTGCTGGGCTGTGTGTGTGTCGGGTCAGGTGGGCTGCTGGGCTGTGTGGGTCGGGA	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_11206:HG3_PB_pbsv_16760:HG4_PB_HySA_24820:HG3_PB_HySA_25692:HG2_PB_pbsv_17084:HG4_Ill_GATKHC_26941:HG4_PB_pbsv_16985:HG4_Ill_GATKHCSBGrefine_11553:HG3_Ill_GATKHC_26863:HG3_Ill_GATKHCSBGrefine_11128:HG2_PB_assemblyticsfalcon_11149:HG2_Ill_GATKHC_27014;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11206:HG4_Ill_GATKHC_26941:HG4_Ill_GATKHCSBGrefine_11553:HG3_Ill_GATKHC_26863:HG3_Ill_GATKHCSBGrefine_11128:HG2_PB_assemblyticsfalcon_11149:HG2_Ill_GATKHC_27014;NumExactMatchSVs=7;ClusterMaxShiftDist=0.15748;ClusterMaxSizeDiff=0.110236;ClusterMaxEditDist=0.283465;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=59;DistBack=-1;DistForward=8;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=356;REFWIDENED=17:80597523-80597878;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2333.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:27:0|1:20:2:2:24:./.:22:1:4:23:./.:6:1:./.:.:.:.:.:.
chr17	80661820	HG2_Ill_svaba_21059	T	TGCACCTCCAACCTGACCCCCACCTCTCACTCTATCCTCACCCCTCACCTGACCCCACCCGACCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13796:HG4_Ill_svaba_21007:HG3_PB_pbsv_16762:HG3_Ill_svaba_21270:HG2_Ill_svaba_21059:HG2_PB_assemblyticsfalcon_11156:HG2_PB_assemblyticsPBcR_10773:HG4_PB_HySA_24824:HG3_PB_HySA_25695:HG4_Ill_GATKHC_26944:HG2_PB_HySA_31080;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_svaba_21059:HG3_Ill_svaba_21270:HG4_Ill_svaba_21007;NumExactMatchSVs=3;ClusterMaxShiftDist=0.209677;ClusterMaxSizeDiff=0.193548;ClusterMaxEditDist=0.290323;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=36;DistForward=90;DistMin=36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=16;REFWIDENED=17:80661819-80661837;PctSeqSimilarity=0.9843;PctSizeSimilarity=0.9688;PctRecOverlap=0.0154;SizeDiff=2;StartDistance=63;EndDistance=63;GTMatch=0;TruScore=65;MatchId=2335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:51:1/1:2:15:5:28:./.:3:3:4:8:./.:5:2:./.:.:.:.:.:.
chr17	80671108	HG3_Ill_250bpfermikitraw_21876	A	AGGCCGCCGCCATCTGTGGGCGTCGCATGCCCACGCAGAGACTGCTCCACACT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21238:HG2_PB_PB10Xdip_13797:HG2_PB_HySA_31084:HG2_PB_assemblyticsfalcon_11158:HG3_Ill_GATKHC_26868:HG2_Ill_GATKHC_27018:HG3_Ill_250bpfermikitraw_21876:HG3_PB_pbsv_16765:HG3_Ill_150bpfermikitraw_21279:HG2_Ill_svaba_21060:HG2_Ill_Krunchall_22866:HG2_Ill_250bpfermikitraw_22524;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21238:HG3_Ill_250bpfermikitraw_21876:HG3_Ill_150bpfermikitraw_21279:HG2_Ill_svaba_21060:HG2_Ill_Krunchall_22866:HG2_Ill_250bpfermikitraw_22524;NumExactMatchSVs=6;ClusterMaxShiftDist=0.291667;ClusterMaxSizeDiff=0.291667;ClusterMaxEditDist=0.395833;PBcalls=4;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=2933;DistForward=85;DistMin=85;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=361;REFWIDENED=17:80671039-80671399;PctSeqSimilarity=0.9717;PctSizeSimilarity=0.963;PctRecOverlap=0.0364;SizeDiff=-2;StartDistance=-52;EndDistance=-52;GTMatch=0;TruScore=65;MatchId=2336.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:23:0|1:20:2:3:13:./.:8:0:1:3:0/1:25:9:./.:.:.:.:.:.
chr17	80759977	HG3_PB_SVrefine2Falcon1Dovetail_10554	T	TGACAGGCTCCCTTTCTTTTTTTTTTTTTTTTTCCCAAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCAATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGTGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTGGGGCGGCGGGGCAGAAGCGCCCCTCACCTCCGGATGGCGCGGCTGGCCGGGCGGGGGGCTGATCCCCCCACCACCCTCCCGGACGGGGCGGCTGGCCGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAGGCGCCGCTCACCTCCTGGATAGGGCGGCTGGCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCCGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGACCCCCCCCCCGCCTCCCTCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGCTGATCCCCCACCTCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCTGGGCGGGGGCTGACCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGTGGGGGCTGACCCCCCCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCGGGCAGAGGCGCCCTCACCTCCCGGACGGGGCGGCCGGCCGGGCGGGGGCTGACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGCTGA	10	PASS	ClusterIDs=HG2_PB_HySA_31092:HG4_PB_pbsv_16993:HG3_PB_HySA_25705:HG2_PB_PB10Xdip_13804:HG3_PB_pbsv_16773:HG2_PB_pbsv_17096:HG2_PB_assemblyticsfalcon_11166:HG4_PB_HySA_24838:HG4_PB_SVrefine2Falcon1Dovetail_10573:HG3_PB_SVrefine2Falcon1Dovetail_10554:HG4_PB_SVrefine2PBcRDovetail_8535:HG2_PB_SVrefine2PB10Xhap12_12405:HG2_PB_SVrefine2PBcRplusDovetail_4584:HG2_PB_SVrefine2Falcon1plusDovetail_4993;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10554;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0719776;ClusterMaxSizeDiff=0.0719776;ClusterMaxEditDist=0.187988;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1394;DistBack=432;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=17:80759978-80759992;PctSeqSimilarity=0.99;PctSizeSimilarity=0.9859;PctRecOverlap=0.9859;SizeDiff=-20;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2337.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:35:0|1:18:0:2:29:./.:11:0:0:3:0/1:11:9:0/1:39:94:.:1321:.
chr17	80920543	HG2_PB_SVrefine2PBcRplusDovetail_4592	CACTGAGGTATT	GATTTAGGGTGGAGGCTCCCGCGGGTGCTGGTGGACACGGACCTCGCACGGGTGATTTAGGGTGGAGGCTCCCGCGGGTGCTGGTGGACACGGACCCTCGCACGGGTGATTTAGGGTGGAGGGTCCCGCGGTGCTGGTGGACACGGACCCTCACACGGGTGATTTAGGGTGGAGGCTCCCGCGGGTGCTGGTGGACAGGACCCTCACACGGGTGATTTAGGGTGGAGGTTCCCGTGGGTGCTGGTGGACACAGTCCCTCGCAGGGGTCACTGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5002:HG2_PB_assemblyticsPBcR_10790:HG2_PB_SVrefine2PBcRplusDovetail_4592:HG2_PB_pbsv_17109;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_4592:HG2_PB_assemblyticsPBcR_10790;NumExactMatchSVs=2;ClusterMaxShiftDist=0.025974;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.12987;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=263;DistBack=38;DistForward=169;DistMin=38;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=227;REFWIDENED=17:80920316-80920542;PctSeqSimilarity=0.9863;PctSizeSimilarity=0.9741;PctRecOverlap=0.9234;SizeDiff=-7;StartDistance=14;EndDistance=25;GTMatch=0;TruScore=96;MatchId=2338.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:34:0|1:38:2:1:25:0|1:24:0:1:22:0/1:32:9:./.:.:.:.:.:.
chr17	80927210	HG2_Ill_svaba_21075	A	ATTTTAGTAGGGACAGGGTTTCACTACATTGCCCAGGGCTGATTTTTGTAT	20	PASS	ClusterIDs=HG4_PB_pbsv_17005:HG4_CG_vcfBeta_10682:HG2_PB_assemblyticsfalcon_11178:HG3_CG_vcfBeta_9171:HG3_PB_pbsv_16785:HG4_Ill_svaba_21019:HG4_Ill_Krunchall_23172:HG4_Ill_GATKHC_26959:HG4_Ill_GATKHCSBGrefine_11561:HG4_Ill_250bpfermikitraw_22153:HG4_Ill_150bpfermikitraw_21333:HG3_Ill_svaba_21289:HG3_Ill_Spiral_17427:HG3_Ill_GATKHC_26890:HG3_Ill_GATKHCSBGrefine_11137:HG3_Ill_250bpfermikitraw_21893:HG2_Ill_svaba_21075:HG2_Ill_SpiralSDKrefine_7050:HG2_Ill_GATKHC_27035:HG2_Ill_GATKHCSBGrefine_11218:HG2_Ill_250bpfermikitraw_22536:HG2_Ill_150bpfermikitraw_21247:HG2_CG_vcfBeta_9674;NumClusterSVs=23;ExactMatchIDs=HG2_CG_vcfBeta_9674:HG2_Ill_150bpfermikitraw_21247:HG2_Ill_250bpfermikitraw_22536:HG2_Ill_GATKHCSBGrefine_11218:HG2_Ill_GATKHC_27035:HG2_Ill_SpiralSDKrefine_7050:HG2_Ill_svaba_21075:HG3_Ill_250bpfermikitraw_21893:HG3_Ill_GATKHCSBGrefine_11137:HG3_Ill_GATKHC_26890:HG3_Ill_Spiral_17427:HG3_Ill_svaba_21289:HG4_Ill_150bpfermikitraw_21333:HG4_Ill_250bpfermikitraw_22153:HG4_Ill_GATKHCSBGrefine_11561:HG4_Ill_GATKHC_26959:HG4_Ill_Krunchall_23172:HG4_Ill_svaba_21019;NumExactMatchSVs=18;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.26087;PBcalls=3;Illcalls=17;TenXcalls=0;CGcalls=3;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=1;HG2count=8;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=50;DistBack=5078;DistForward=70;DistMin=70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=100;REFWIDENED=17:80927197-80927296;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:21:0|1:22:3:2:18:./.:15:1:4:11:0/1:19:17:./.:.:.:.:.:.
chr18	712349	HG2_PB_SVrefine2Falcon1plusDovetail_5027	G	GCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12439:HG2_PB_PB10Xdip_14278:HG2_PB_HySA_31163:HG3_PB_pbsv_16824:HG3_PB_SVrefine2PBcRDovetail_8302:HG3_PB_HySA_25751:HG2_PB_SVrefine2Falcon2Bionano_8445:HG2_PB_SVrefine2Falcon1plusDovetail_5027:HG2_PB_SVrefine2PBcRplusDovetail_4616;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5027:HG2_PB_SVrefine2Falcon2Bionano_8445:HG3_PB_SVrefine2PBcRDovetail_8302;NumExactMatchSVs=3;ClusterMaxShiftDist=0.258373;ClusterMaxSizeDiff=0.258373;ClusterMaxEditDist=0.258373;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=108;DistBack=-90;DistForward=-1;DistMin=-90;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=168;REFWIDENED=18:712350-712517;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2345.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:./.:0:0:0:0:./.:0:0:0:0:0/1:6:24:./.:.:.:.:.:.
chr18	1235777	HG2_PB_SVrefine2PB10Xhap12_12443	T	TAAAAATAATTACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGAAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10594:HG4_PB_assemblyticsfalcon_10999:HG2_PB_pbsv_17151:HG3_PB_pbsv_16831:HG2_PB_assemblyticsfalcon_11205:HG4_PB_pbsv_17053:HG2_PB_assemblyticsPBcR_10824:HG2_PB_HySA_31173:HG4_PB_HySA_24891:HG2_PB_PB10Xdip_14346:HG2_PB_PB10Xdip_14347:HG3_PB_HySA_25759:HG2_PB_SVrefine2Falcon2Bionano_8449:HG4_PB_SVrefine2Falcon1Dovetail_10607:HG4_PB_SVrefine2PBcRDovetail_8563:HG2_Ill_SVrefine2DISCOVARplusDovetail_5397:HG2_PB_SVrefine2PB10Xhap12_12443:HG2_PB_SVrefine2Falcon1plusDovetail_5032:HG2_PB_SVrefine2PBcRplusDovetail_4620:HG2_10X_SVrefine210Xhap12_11897;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12443;NumExactMatchSVs=1;ClusterMaxShiftDist=0.112977;ClusterMaxSizeDiff=0.112977;ClusterMaxEditDist=0.213018;PBcalls=18;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=329;DistBack=10784;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=18:1235778-1235790;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.994;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:0:25:0:28:1/1:0:12:0:10:1/1:0:29:1/1:2:62:.:.:.
chr18	1803866	HG2_Ill_SVrefine2DISCOVARplusDovetail_5400	G	GCCTGCAGTTTATATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5034:HG4_PB_pbsv_17056:HG4_PB_SVrefine2PBcRDovetail_8566:HG2_PB_assemblyticsfalcon_11213:HG2_PB_pbsv_17154:HG4_Ill_SVrefine2DISCOVARDovetail_11940:HG2_PB_PB10Xdip_14025:HG2_Ill_SVrefine2DISCOVARplusDovetail_5400:HG2_Ill_breakscan11_4751:HG2_PB_SVrefine2PB10Xhap12_12445;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5400:HG4_Ill_SVrefine2DISCOVARDovetail_11940;NumExactMatchSVs=2;ClusterMaxShiftDist=0.295455;ClusterMaxSizeDiff=0.272727;ClusterMaxEditDist=0.348485;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=138;DistBack=-1;DistForward=17;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=18:1803867-1803884;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2347.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:40:0|1:43:3:1:36:0|1:18:0:0:8:./.:21:3:./.:.:.:.:.:.
chr18	1955408	HG4_Ill_150bpfermikitraw_21367	A	ACAGGGGACGTGGGGCACAGGGGTCCCACGGCTCCTTCAGCCGCTCCTGCTGCCGCTTCTGCCGC	20	PASS	ClusterIDs=HG4_PB_pbsv_17058:HG2_PB_PB10Xdip_14027:HG2_PB_pbsv_17156:HG2_PB_PB10Xdip_14026:HG2_PB_HySA_31189:HG4_PB_HySA_24901:HG4_Ill_svaba_21052:HG4_Ill_scalpel_15552:HG4_Ill_manta_3889:HG4_Ill_Krunchall_23213:HG4_Ill_GATKHC_27014:HG4_Ill_GATKHCSBGrefine_11595:HG4_Ill_250bpfermikitraw_22193:HG4_Ill_150bpfermikitraw_21367:HG2_Ill_svaba_21112:HG2_Ill_manta_4586:HG2_Ill_SpiralSDKrefine_7082:HG2_Ill_Krunchall_22906:HG2_Ill_GATKHC_27084:HG2_Ill_GATKHCSBGrefine_11241:HG2_Ill_250bpfermikitraw_22575:HG2_Ill_150bpfermikitraw_21285:HG4_Ill_Cortex_1473:HG2_Ill_Cortex_3574;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21285:HG2_Ill_250bpfermikitraw_22575:HG2_Ill_GATKHCSBGrefine_11241:HG2_Ill_GATKHC_27084:HG2_Ill_Krunchall_22906:HG2_Ill_SpiralSDKrefine_7082:HG2_Ill_manta_4586:HG2_Ill_svaba_21112:HG4_Ill_150bpfermikitraw_21367:HG4_Ill_250bpfermikitraw_22193:HG4_Ill_GATKHCSBGrefine_11595:HG4_Ill_GATKHC_27014:HG4_Ill_Krunchall_23213:HG4_Ill_manta_3889:HG4_Ill_scalpel_15552:HG4_Ill_svaba_21052;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0615385;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.272727;PBcalls=6;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=33567;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=18:1955409-1955410;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:38:0|1:21:0:1:36:0|1:12:0:0:20:0/1:20:20:./.:.:.:.:.:.
chr18	2158970	HG2_10X_SVrefine210Xhap12_11904	G	GAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAATA	20	PASS	ClusterIDs=HG2_PB_pbsv_17159:HG3_PB_SVrefine2PBcRDovetail_8310:HG3_Ill_GATKHC_26954:HG3_Ill_GATKHCSBGrefine_11167:HG3_Ill_250bpfermikitraw_21930:HG2_PB_SVrefine2Falcon1plusDovetail_5036:HG2_PB_assemblyticsfalcon_11218:HG3_PB_SVrefine2Falcon1Dovetail_10599:HG2_PB_PB10Xdip_14030:HG2_PB_PB10Xdip_14029:HG2_PB_SVrefine2Falcon2Bionano_8452:HG2_PB_SVrefine2PB10Xhap12_12448:HG2_PB_SVrefine2PBcRplusDovetail_4624:HG2_PB_assemblyticsPBcR_10837:HG4_Ill_GATKHC_27015:HG4_Ill_GATKHCSBGrefine_11600:HG2_Ill_SVrefine2DISCOVARplusDovetail_5404:HG2_Ill_GATKHCSBGrefine_11246:HG2_10X_SVrefine210Xhap12_11904:HG3_PB_pbsv_16836:HG2_PB_HySA_31192:HG4_PB_pbsv_17061;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11904:HG2_Ill_GATKHCSBGrefine_11246:HG2_Ill_SVrefine2DISCOVARplusDovetail_5404:HG4_Ill_GATKHCSBGrefine_11600:HG4_Ill_GATKHC_27015;NumExactMatchSVs=5;ClusterMaxShiftDist=0.186916;ClusterMaxSizeDiff=0.186916;ClusterMaxEditDist=0.212963;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=116;DistBack=11;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=18:2158870-2158971;PctSeqSimilarity=0.9748;PctSizeSimilarity=0.9667;PctRecOverlap=0.9669;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=96;MatchId=2349.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:42:1/1:5:19:2:15:./.:3:15:2:9:0/1:5:27:./.:.:.:.:.:.
chr18	3016163	HG3_Ill_250bpfermikitraw_21935	G	GTCACTCCTGCTCTAGCTCTCTGCAGAGCTACTCTATTGGCCACTTTGAGGGCT	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_11224:HG3_Ill_manta_3750:HG3_Ill_Spiral_17458:HG2_PB_PB10Xdip_14099:HG2_PB_PB10Xdip_14098:HG2_Ill_manta_4590:HG4_PB_pbsv_17064:HG2_PB_HySA_31200:HG2_PB_pbsv_17163:HG3_PB_pbsv_16841:HG4_Ill_svaba_21057:HG4_Ill_GATKHC_27022:HG4_Ill_GATKHCSBGrefine_11603:HG3_Ill_GATKHC_26959:HG3_Ill_GATKHCSBGrefine_11172:HG2_Ill_GATKHC_27093:HG2_Ill_GATKHCSBGrefine_11250:HG4_Ill_scalpel_15557:HG4_Ill_Krunchall_23220:HG4_Ill_250bpfermikitraw_22202:HG4_Ill_150bpfermikitraw_21376:HG3_Ill_svaba_21335:HG3_Ill_scalpel_16291:HG3_Ill_Krunchall_22501:HG3_Ill_250bpfermikitraw_21935:HG3_Ill_150bpfermikitraw_21331:HG2_Ill_svaba_21118:HG2_Ill_scalpel_15952:HG2_Ill_Krunchall_22913:HG2_Ill_250bpfermikitraw_22582:HG2_Ill_150bpfermikitraw_21294:HG4_PB_assemblyticsfalcon_11019;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21294:HG2_Ill_250bpfermikitraw_22582:HG2_Ill_Krunchall_22913:HG2_Ill_scalpel_15952:HG2_Ill_svaba_21118:HG3_Ill_150bpfermikitraw_21331:HG3_Ill_250bpfermikitraw_21935:HG3_Ill_Krunchall_22501:HG3_Ill_scalpel_16291:HG3_Ill_svaba_21335:HG4_Ill_150bpfermikitraw_21376:HG4_Ill_250bpfermikitraw_22202:HG4_Ill_Krunchall_23220:HG4_Ill_scalpel_15557:HG4_Ill_svaba_21057;NumExactMatchSVs=15;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.230769;ClusterMaxEditDist=0.291262;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=0;DistForward=7;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=18:3016162-3016164;PctSeqSimilarity=0.982;PctSizeSimilarity=0.9815;PctRecOverlap=0.9636;SizeDiff=-1;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=97;MatchId=2350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:39:1/1:0:20:1:17:1/1:1:36:0:22:1/1:0:43:./.:.:.:.:.:.
chr18	3272249	HG4_Ill_GATKHC_27027	A	AATTGAGGCTCAGAGAGGTTATGTTATACTGGTAGTAAAATGGGAATAAGAGG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4754:HG4_PB_pbsv_17068:HG2_PB_PB10Xdip_14105:HG2_PB_pbsv_17166:HG2_PB_PB10Xdip_14104:HG3_PB_HySA_25778:HG4_PB_assemblyticsfalcon_11024:HG4_Ill_svaba_21063:HG4_Ill_Krunchall_23226:HG4_Ill_GATKHC_27027:HG4_Ill_GATKHCSBGrefine_11604:HG4_Ill_250bpfermikitraw_22209:HG4_Ill_150bpfermikitraw_21382:HG3_Ill_svaba_21339:HG3_Ill_scalpel_16296:HG3_Ill_manta_3751:HG3_Ill_Krunchall_22506:HG3_Ill_GATKHC_26963:HG3_Ill_GATKHCSBGrefine_11173:HG3_Ill_FB_14498:HG3_Ill_250bpfermikitraw_21940:HG3_Ill_150bpfermikitraw_21336:HG2_PB_assemblyticsfalcon_11229:HG2_PB_assemblyticsPBcR_10846:HG2_Ill_svaba_21124:HG2_Ill_manta_4591:HG2_Ill_Krunchall_22919:HG2_Ill_GATKHC_27098:HG2_Ill_GATKHCSBGrefine_11251:HG2_Ill_250bpfermikitraw_22589:HG2_Ill_150bpfermikitraw_21300:HG2_PB_HySA_31202;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21300:HG2_Ill_250bpfermikitraw_22589:HG2_Ill_GATKHCSBGrefine_11251:HG2_Ill_GATKHC_27098:HG2_Ill_Krunchall_22919:HG2_Ill_manta_4591:HG2_Ill_svaba_21124:HG2_PB_assemblyticsPBcR_10846:HG2_PB_assemblyticsfalcon_11229:HG3_Ill_150bpfermikitraw_21336:HG3_Ill_250bpfermikitraw_21940:HG3_Ill_FB_14498:HG3_Ill_GATKHCSBGrefine_11173:HG3_Ill_GATKHC_26963:HG3_Ill_Krunchall_22506:HG3_Ill_manta_3751:HG3_Ill_scalpel_16296:HG3_Ill_svaba_21339:HG4_Ill_150bpfermikitraw_21382:HG4_Ill_250bpfermikitraw_22209:HG4_Ill_GATKHCSBGrefine_11604:HG4_Ill_GATKHC_27027:HG4_Ill_Krunchall_23226:HG4_Ill_svaba_21063:HG4_PB_assemblyticsfalcon_11024;NumExactMatchSVs=25;ClusterMaxShiftDist=0.144144;ClusterMaxSizeDiff=0.126126;ClusterMaxEditDist=0.263158;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=1091;DistForward=48;DistMin=48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=18:3272250-3272300;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2351.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:82:./.:1:11:1:2:./.:1:16:0:13:1/1:0:43:./.:.:.:.:.:.
chr18	3421219	HG4_Ill_SVrefine2DISCOVARDovetail_11952	T	TTACTATACTATATATATACATTTATATATAGTATATAAAATATATATATATTTGAGATGGAGTTTGCGTCC	20	PASS	ClusterIDs=HG4_PB_HySA_24911:HG3_PB_HySA_25780:HG2_PB_pbsv_17167:HG2_PB_PB10Xdip_14111:HG4_PB_pbsv_17069:HG2_PB_PB10Xdip_14110:HG2_PB_HySA_31203:HG4_PB_SVrefine2Falcon1Dovetail_10617:HG3_PB_pbsv_16846:HG4_Ill_SVrefine2DISCOVARDovetail_11952:HG4_Ill_GATKHC_27030:HG4_Ill_250bpfermikitraw_22211:HG4_Ill_150bpfermikitraw_21384:HG2_PB_SVrefine2PBcRplusDovetail_4629:HG2_PB_SVrefine2PB10Xhap12_12453:HG2_PB_SVrefine2Falcon2Bionano_8457:HG2_PB_SVrefine2Falcon1plusDovetail_5041:HG2_Ill_svaba_21125:HG2_Ill_SVrefine2DISCOVARplusDovetail_5409:HG2_Ill_GATKHC_27099:HG2_Ill_250bpfermikitraw_22590:HG2_Ill_150bpfermikitraw_21301;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21301:HG2_Ill_250bpfermikitraw_22590:HG2_Ill_GATKHC_27099:HG2_Ill_SVrefine2DISCOVARplusDovetail_5409:HG2_Ill_svaba_21125:HG2_PB_SVrefine2Falcon1plusDovetail_5041:HG2_PB_SVrefine2Falcon2Bionano_8457:HG2_PB_SVrefine2PB10Xhap12_12453:HG2_PB_SVrefine2PBcRplusDovetail_4629:HG4_Ill_150bpfermikitraw_21384:HG4_Ill_250bpfermikitraw_22211:HG4_Ill_GATKHC_27030:HG4_Ill_SVrefine2DISCOVARDovetail_11952:HG4_PB_SVrefine2Falcon1Dovetail_10617;NumExactMatchSVs=14;ClusterMaxShiftDist=0.108844;ClusterMaxSizeDiff=0.0810811;ClusterMaxEditDist=0.337838;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=71;DistBack=-71;DistForward=-1;DistMin=-71;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=172;REFWIDENED=18:3421220-3421391;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2352.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:56:1/1:6:31:1:17:./.:4:1:5:3:0/1:11:31:./.:.:.:.:.:.
chr18	3609773	HG2_Ill_SVrefine2DISCOVARplusDovetail_5411	A	AGGCCGGGCGCGGTGGCTCATGCCTTTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCATTTGAGGTCAGAAGTTCAAGACCAGCCTGGCCAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAACTGGGCGTGGTGGCACATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCATGACAATCGCTTGAGCCTGGGAGGCGGAAGTTGTGGTGAGCCGAGATCGCCCCACTGCACTCCAGCCTGGGCGACAGAGACGCTGTCTCAAAAAAAAAGAAAACCATCTTGGAAACTCTGAGGGTTCTTTTTTGAGGGGGAAAGTTCATACTTTTAAGATGCTTTGGTTCCTACTGCATGAAGAGCCCCGCGATGAGTGCGTGTGAATGCATATGTTGAGATGCCTTTTCCTAGTGCTTAATATTAAAAATTCATCTC	20	PASS	ClusterIDs=HG2_Ill_Spiral_1122:HG4_PB_assemblyticsfalcon_11029:HG4_PB_SVrefine2Falcon1Dovetail_10618:HG4_PB_HySA_24917:HG2_PB_HySA_31207:HG2_PB_pbsv_17169:HG2_PB_HySA_31206:HG4_Ill_GATKHCSBGrefine_11605:HG2_Ill_GATKHCSBGrefine_11252:HG4_PB_pbsv_17071:HG4_PB_SVrefine2PBcRDovetail_8572:HG2_PB_SVrefine2Falcon2Bionano_8458:HG2_PB_SVrefine2Falcon1plusDovetail_5042:HG2_Ill_SVrefine2DISCOVARplusDovetail_5411:HG2_10X_SVrefine210Xhap12_11914;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11914:HG2_Ill_SVrefine2DISCOVARplusDovetail_5411:HG2_PB_SVrefine2Falcon1plusDovetail_5042:HG2_PB_SVrefine2Falcon2Bionano_8458;NumExactMatchSVs=4;ClusterMaxShiftDist=0.183445;ClusterMaxSizeDiff=0.183445;ClusterMaxEditDist=0.263982;PBcalls=10;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=447;DistBack=8881;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=18:3609774-3610071;PctSeqSimilarity=0.9767;PctSizeSimilarity=0.9978;PctRecOverlap=0.6592;SizeDiff=-1;StartDistance=-152;EndDistance=-152;GTMatch=0;TruScore=87;MatchId=2353.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:36:0|1:29:4:1:29:./.:10:1:0:11:0/1:32:15:0/1:5:29:.:.:.
chr18	3618665	HG3_Ill_SVrefine2DISCOVARDovetail_12197	G	GGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGTTTGATACCAGCCTGACCAACATGGTGAAACCCTGACTCTACTAAAAATACAAAAATTAGCCGGGCTTGGTGGTGTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGATATTGTACCATTGCACTCCAACCTAGGCGACGGAGTGAGACTCTGTCTCAAAAAACAAAACAAACAAGCAAAAAACAAACAAACAAAACAGGCAGTTTTGGGTTGTGGGGCACACTTTTTTTTTTTTTTTTCTGAGATGGGAGTCTCACTCCGTCACCCAGGCTGGAGCGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTGTTTTTCTGTTTTCAGTACAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTAACCTCCTGATCTGCTCGCCTCGGCCTCCCAAAGGGCTGGGATTACAGGCATGAGCCACCGCGCTCGGCCCCCAGAGCACACTTTTAAAGTTAACAGCTGGGCCTCCCTCTCCCAGCATTCATCCTCACTGGGCCTAGTCTACCTGTTACACCAGGGAAGAACTGAGTGATCTTTCTTAACTTCCCAGGATCTTAGCCCAATGCTATGGCCACTTGTGTCCCCCGACCCCCCAACAAATGCATATGTTGAAGTCCTAACTCTCAGAATGTAACTGTCTTGAGAGATAGGGTCTTTAAAGAGATGATTAGGCCAGGGGT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_14113:HG4_PB_pbsv_17072:HG3_PB_pbsv_16847:HG4_PB_HySA_24918:HG4_PB_SVrefine2Falcon1Dovetail_10619:HG3_PB_SVrefine2Falcon1Dovetail_10605:HG4_PB_SVrefine2PBcRDovetail_8573:HG2_PB_SVrefine2Falcon2Bionano_8459:HG4_Ill_SVrefine2DISCOVARDovetail_11954:HG4_Ill_MetaSV_2126:HG4_Ill_GATKHCSBGrefine_11606:HG2_Ill_SVrefine2DISCOVARplusDovetail_5412:HG2_PB_SVrefine2PB10Xhap12_12455:HG2_PB_SVrefine2PBcRplusDovetail_4630:HG2_PB_SVrefine2Falcon1plusDovetail_5043:HG3_PB_SVrefine2PBcRDovetail_8314:HG3_Ill_SVrefine2DISCOVARDovetail_12197:HG3_Ill_MetaSV_2210:HG3_Ill_GATKHCSBGrefine_11174:HG2_Ill_GATKHCSBGrefine_11253:HG2_10X_SVrefine210Xhap12_11915:HG2_Ill_MetaSV_2066:HG3_PB_HySA_25783:HG2_PB_PB10Xdip_14114;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11915:HG2_Ill_GATKHCSBGrefine_11253:HG3_Ill_GATKHCSBGrefine_11174:HG3_Ill_MetaSV_2210:HG3_Ill_SVrefine2DISCOVARDovetail_12197:HG3_PB_SVrefine2PBcRDovetail_8314;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0376106;ClusterMaxSizeDiff=0.0376106;ClusterMaxEditDist=0.189336;PBcalls=14;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=890;DistBack=8779;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=283;REFWIDENED=18:3618666-3618948;PctSeqSimilarity=0.9961;PctSizeSimilarity=0.9989;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2354.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:26:1:24:./.:1:12:0:11:1/1:0:33:./.:14:154:.:1364:.
chr18	4002385	HG2_Ill_GATKHC_27107	G	GCCTCTCCCCGGCTGCTGCCACCCCGAGACAGCAAGACCAGACCCATCTCTTCTC	20	PASS	ClusterIDs=HG3_PB_HySA_25788:HG4_PB_assemblyticsfalcon_11034:HG4_PB_HySA_24922:HG2_PB_PB10Xdip_14133:HG3_PB_pbsv_16850:HG2_PB_PB10Xdip_14132:HG4_Ill_svaba_21067:HG3_Ill_svaba_21344:HG2_Ill_svaba_21130:HG4_Ill_manta_3892:HG2_PB_pbsv_17174:HG4_Ill_Krunchall_23233:HG4_Ill_GATKHC_27038:HG4_Ill_GATKHCSBGrefine_11609:HG4_Ill_250bpfermikitraw_22217:HG4_Ill_150bpfermikitraw_21392:HG3_Ill_Krunchall_22515:HG3_Ill_GATKHC_26971:HG3_Ill_GATKHCSBGrefine_11176:HG3_Ill_250bpfermikitraw_21946:HG3_Ill_150bpfermikitraw_21341:HG2_PB_assemblyticsfalcon_11237:HG2_PB_assemblyticsPBcR_10856:HG2_Ill_scalpel_15962:HG2_Ill_manta_4593:HG2_Ill_Krunchall_22926:HG2_Ill_GATKHC_27107:HG2_Ill_GATKHCSBGrefine_11256:HG2_Ill_250bpfermikitraw_22599:HG2_Ill_150bpfermikitraw_21309:HG2_PB_HySA_31213:HG4_PB_pbsv_17076;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21309:HG2_Ill_250bpfermikitraw_22599:HG2_Ill_GATKHCSBGrefine_11256:HG2_Ill_GATKHC_27107:HG2_Ill_Krunchall_22926:HG2_Ill_manta_4593:HG2_Ill_scalpel_15962:HG2_PB_assemblyticsPBcR_10856:HG2_PB_assemblyticsfalcon_11237:HG3_Ill_150bpfermikitraw_21341:HG3_Ill_250bpfermikitraw_21946:HG3_Ill_GATKHCSBGrefine_11176:HG3_Ill_GATKHC_26971:HG3_Ill_Krunchall_22515:HG4_Ill_150bpfermikitraw_21392:HG4_Ill_250bpfermikitraw_22217:HG4_Ill_GATKHCSBGrefine_11609:HG4_Ill_GATKHC_27038:HG4_Ill_Krunchall_23233:HG4_Ill_manta_3892;NumExactMatchSVs=20;ClusterMaxShiftDist=0.11215;ClusterMaxSizeDiff=0.0900901;ClusterMaxEditDist=0.339286;PBcalls=11;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=19978;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=65;REFWIDENED=18:4002379-4002443;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:61:./.:4:11:0:15:./.:1:11:2:13:1/1:1:42:./.:.:.:.:.:.
chr18	4355867	HG2_PB_PB10Xdip_14136	C	CTCTTCTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG	20	PASS	ClusterIDs=HG4_PB_pbsv_17078:HG4_PB_HySA_24925:HG3_PB_pbsv_16853:HG2_PB_pbsv_17176:HG4_PB_assemblyticsfalcon_11037:HG2_PB_assemblyticsPBcR_10859:HG2_PB_assemblyticsfalcon_11239:HG2_Ill_breakscan11_4755:HG2_10X_SVrefine210Xhap12_11920:HG3_Ill_MetaSV_2212:HG4_PB_SVrefine2PBcRDovetail_8577:HG2_PB_SVrefine2PBcRplusDovetail_4633:HG3_PB_SVrefine2Falcon1Dovetail_10609:HG2_PB_SVrefine2PB10Xhap12_12458:HG2_PB_SVrefine2Falcon1plusDovetail_5045:HG2_PB_SVrefine2Falcon2Bionano_8462:HG2_PB_PB10Xdip_14136:HG2_PB_PB10Xdip_14135:HG2_PB_HySA_31216:HG4_PB_SVrefine2Falcon1Dovetail_10621;NumClusterSVs=20;ExactMatchIDs=HG2_PB_PB10Xdip_14135:HG2_PB_PB10Xdip_14136:HG2_PB_SVrefine2Falcon2Bionano_8462;NumExactMatchSVs=3;ClusterMaxShiftDist=0.226708;ClusterMaxSizeDiff=0.226708;ClusterMaxEditDist=0.306306;PBcalls=17;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=303;DistBack=979;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=18:4355868-4355881;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9934;PctRecOverlap=0.9934;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2356.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:13:83:1/1:1:15:1:4:./.:0:4:0:14:1/1:0:8:1/1:2:60:.:.:.
chr18	4874669	HG3_PB_SVrefine2Falcon1Dovetail_10613	A	AAAAAGCCACTTACAAATAAAATATAGGAATGTATTGCCAGCAGACCAATAGAATAAGGTATATTAAAGATAGTTCTTCAGAAATAAGGAAAATAATCCTAATCAGATAAAGAGGAATGGAAATGGTGTACATCTGAGCAAATATGAATGAACGACAACTGTGCAGAACAATAACAACAATTATTATGCTATTGTTATTGTGACATTTTGTGATGTTAGTGATAAACCTGGACACTAGTTATAGTGGT	20	PASS	ClusterIDs=HG3_PB_pbsv_16854:HG4_PB_assemblyticsfalcon_11042:HG4_PB_pbsv_17082:HG2_PB_assemblyticsfalcon_11244:HG2_PB_pbsv_17179:HG2_PB_PB10Xdip_14172:HG2_PB_PB10Xdip_14171:HG2_Ill_breakscan11_4756:HG4_PB_SVrefine2PBcRDovetail_8580:HG4_PB_SVrefine2Falcon1Dovetail_10624:HG4_Ill_svaba_21074:HG4_Ill_SVrefine2DISCOVARDovetail_11963:HG4_Ill_MetaSV_2129:HG4_Ill_GATKHCSBGrefine_11614:HG4_Ill_Cortex_1477:HG3_PB_SVrefine2PBcRDovetail_8320:HG3_PB_SVrefine2Falcon1Dovetail_10613:HG3_Ill_svaba_21350:HG3_Ill_SVrefine2DISCOVARDovetail_12208:HG3_Ill_MetaSV_2213:HG3_Ill_GATKHCSBGrefine_11178:HG3_Ill_Cortex_1536:HG2_PB_SVrefine2PBcRplusDovetail_4635:HG2_PB_SVrefine2PB10Xhap12_12462:HG2_PB_SVrefine2Falcon2Bionano_8463:HG2_PB_SVrefine2Falcon1plusDovetail_5048:HG2_Ill_svaba_21136:HG2_Ill_SVrefine2DISCOVARplusDovetail_5419:HG2_Ill_MetaSV_2068:HG2_Ill_GATKHCSBGrefine_11260:HG2_Ill_Cortex_3589:HG2_10X_SVrefine210Xhap12_11923;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11923:HG2_Ill_Cortex_3589:HG2_Ill_GATKHCSBGrefine_11260:HG2_Ill_MetaSV_2068:HG2_Ill_SVrefine2DISCOVARplusDovetail_5419:HG2_Ill_svaba_21136:HG2_PB_SVrefine2Falcon1plusDovetail_5048:HG2_PB_SVrefine2Falcon2Bionano_8463:HG2_PB_SVrefine2PB10Xhap12_12462:HG2_PB_SVrefine2PBcRplusDovetail_4635:HG3_Ill_Cortex_1536:HG3_Ill_GATKHCSBGrefine_11178:HG3_Ill_MetaSV_2213:HG3_Ill_SVrefine2DISCOVARDovetail_12208:HG3_Ill_svaba_21350:HG3_PB_SVrefine2Falcon1Dovetail_10613:HG3_PB_SVrefine2PBcRDovetail_8320:HG4_Ill_Cortex_1477:HG4_Ill_GATKHCSBGrefine_11614:HG4_Ill_MetaSV_2129:HG4_Ill_SVrefine2DISCOVARDovetail_11963:HG4_Ill_svaba_21074:HG4_PB_SVrefine2Falcon1Dovetail_10624:HG4_PB_SVrefine2PBcRDovetail_8580;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.047619;ClusterMaxEditDist=0.210938;PBcalls=15;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=247;DistBack=9805;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=18:4874670-4874671;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:104:1/1:0:26:0:47:1/1:1:27:0:25:1/1:0:18:./.:.:.:.:.:.
chr18	7913133	HG2_Ill_150bpfermikitraw_21342	C	CGATTGTTCATTTCTCGCTTGTAGAAATGCAGTTGATTTTGTTTATTGATCTTGTATT	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21342:HG4_PB_assemblyticsfalcon_11061:HG4_Ill_svaba_21094:HG2_PB_pbsv_17192:HG4_Ill_Krunchall_23268:HG4_PB_HySA_24947:HG4_Ill_GATKHC_27069:HG4_Ill_GATKHCSBGrefine_11622:HG4_Ill_250bpfermikitraw_22246:HG4_Ill_150bpfermikitraw_21421:HG2_Ill_svaba_21159:HG2_Ill_Krunchall_22961:HG2_Ill_GATKHC_27147:HG2_Ill_GATKHCSBGrefine_11267:HG2_Ill_250bpfermikitraw_22632;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21342:HG4_Ill_svaba_21094:HG4_Ill_Krunchall_23268:HG4_Ill_GATKHC_27069:HG4_Ill_GATKHCSBGrefine_11622:HG4_Ill_250bpfermikitraw_22246:HG4_Ill_150bpfermikitraw_21421:HG2_Ill_svaba_21159:HG2_Ill_Krunchall_22961:HG2_Ill_GATKHC_27147:HG2_Ill_GATKHCSBGrefine_11267:HG2_Ill_250bpfermikitraw_22632;NumExactMatchSVs=12;ClusterMaxShiftDist=0.234234;ClusterMaxSizeDiff=0.234234;ClusterMaxEditDist=0.290909;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=28210;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=18:7913134-7913189;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:0|1:35:1:1:27:0|1:12:0:0:25:0/1:16:36:./.:.:.:.:.:.
chr18	8963697	HG2_PB_SVrefine2Falcon2Bionano_8471	C	CACACACACACACACCAAACACATACCCCACACCATACCACACACAGACACCACACACACCACACACACAGACGTTGCACACATGCCCACCACACACACACACACACACAGACACACACAGACACCAAACACATACCTCACACCATACCACACCCACCCACCACACACACACAGACACACACATTACATTATACCATACACACACACACAAACTACACACACATATACCACACCACACATGCAGACATGGACACCAGACACATGTACACCACATGTCGCCCACAGATAG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_11979:HG2_PB_SVrefine2Falcon1plusDovetail_5057:HG2_PB_pbsv_17197:HG3_PB_pbsv_16869:HG4_PB_HySA_24953:HG3_PB_SVrefine2Falcon1Dovetail_10624:HG4_PB_SVrefine2Falcon1Dovetail_10634:HG4_PB_SVrefine2PBcRDovetail_8590:HG4_Ill_manta_3899:HG4_Ill_MetaSV_2137:HG4_Ill_GATKHCSBGrefine_11625:HG3_Ill_manta_3756:HG3_Ill_SVrefine2DISCOVARDovetail_12227:HG3_Ill_MetaSV_2218:HG2_PB_SVrefine2Falcon2Bionano_8471:HG2_Ill_manta_4599:HG2_Ill_SVrefine2DISCOVARplusDovetail_5436:HG3_Ill_GATKHCSBGrefine_11190:HG2_Ill_MetaSV_2074:HG2_Ill_GATKHCSBGrefine_11272:HG3_PB_SVrefine2PBcRDovetail_8328:HG2_PB_SVrefine2PBcRplusDovetail_4642:HG2_PB_SVrefine2PB10Xhap12_12472:HG2_PB_PB10Xdip_14560:HG2_PB_PB10Xdip_14559:HG2_Ill_breakscan11_4757:HG4_PB_pbsv_17098;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5436:HG2_Ill_manta_4599:HG2_PB_SVrefine2Falcon2Bionano_8471:HG3_Ill_MetaSV_2218:HG3_Ill_SVrefine2DISCOVARDovetail_12227:HG3_Ill_manta_3756:HG4_Ill_GATKHCSBGrefine_11625:HG4_Ill_MetaSV_2137:HG4_Ill_manta_3899:HG4_PB_SVrefine2PBcRDovetail_8590;NumExactMatchSVs=10;ClusterMaxShiftDist=0.180704;ClusterMaxSizeDiff=0.180704;ClusterMaxEditDist=0.245023;PBcalls=14;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=288;DistBack=28361;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=18:8963698-8963766;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:77:1/1:3:28:0:21:1/1:4:115:12:220:1/1:0:18:./.:.:.:.:.:.
chr18	9196122	HG2_PB_assemblyticsPBcR_10887	C	CACACACACACACACACACATTGAGGCTAACTGCCTCAGTGCTTTTCATAGAATTTTT	20	PASS	ClusterIDs=HG4_PB_HySA_24959:HG2_PB_assemblyticsfalcon_11271:HG3_Ill_Spiral_17502:HG2_PB_pbsv_17202:HG3_Ill_GATKHC_27020:HG3_PB_pbsv_16872:HG2_PB_assemblyticsPBcR_10887:HG2_Ill_GATKHC_27159:HG2_PB_PB10Xdip_14570:HG2_PB_PB10Xdip_14569:HG3_PB_HySA_25825:HG2_PB_HySA_31254;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHC_27159:HG2_PB_assemblyticsPBcR_10887:HG3_Ill_GATKHC_27020:HG3_Ill_Spiral_17502;NumExactMatchSVs=4;ClusterMaxShiftDist=0.178862;ClusterMaxSizeDiff=0.178862;ClusterMaxEditDist=0.263566;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=57;DistBack=1;DistForward=17;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=136;REFWIDENED=18:9196123-9196258;PctSeqSimilarity=0.9248;PctSizeSimilarity=0.7403;PctRecOverlap=0.026;SizeDiff=-20;StartDistance=-65;EndDistance=-65;GTMatch=0;TruScore=56;MatchId=2361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:1/1:3:29:0:14:./.:4:24:8:32:1/1:0:19:./.:.:.:.:.:.
chr18	9287067	HG2_PB_SVrefine2Falcon2Bionano_8474	T	TAATACTGTGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4758:HG4_PB_pbsv_17103:HG4_PB_assemblyticsfalcon_11071:HG4_PB_HySA_24960:HG4_PB_SVrefine2PBcRDovetail_8593:HG2_PB_SVrefine2Falcon2Bionano_8474:HG2_Ill_MetaSV_2077:HG2_Ill_GATKHCSBGrefine_11275:HG4_PB_SVrefine2Falcon1Dovetail_10637:HG2_PB_pbsv_17204;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8474:HG4_PB_SVrefine2PBcRDovetail_8593;NumExactMatchSVs=2;ClusterMaxShiftDist=0.165663;ClusterMaxSizeDiff=0.165663;ClusterMaxEditDist=0.209877;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=331;DistBack=151;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=18:9287068-9287084;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:39:0|1:38:2:0:26:./.:27:0:0:3:0/1:30:9:0/1:10:44:.:.:.
chr18	9401403	HG2_PB_assemblyticsfalcon_11275	ACATGCCTAATGTTTTCT	TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTAGTAGAGACGGGTTTCACCGTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10639:HG2_PB_pbsv_17206:HG2_Ill_breakscan11_4759:HG4_PB_pbsv_17105:HG2_PB_SVrefine2PB10Xhap12_12480:HG2_PB_assemblyticsPBcR_10891:HG2_PB_assemblyticsfalcon_11275:HG4_PB_assemblyticsfalcon_11074:HG2_PB_SVrefine2Falcon1plusDovetail_5061:HG4_PB_SVrefine2PBcRDovetail_8595:HG2_PB_SVrefine2PBcRplusDovetail_4646:HG4_PB_HySA_24964:HG2_PB_HySA_31258;NumClusterSVs=13;ExactMatchIDs=HG2_PB_assemblyticsfalcon_11275;NumExactMatchSVs=1;ClusterMaxShiftDist=0.208723;ClusterMaxSizeDiff=0.208723;ClusterMaxEditDist=0.254658;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=285;DistBack=-1;DistForward=8300;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=18:9401421-9401402;PctSeqSimilarity=0.9572;PctSizeSimilarity=0.8716;PctRecOverlap=0.9235;SizeDiff=-42;StartDistance=0;EndDistance=17;GTMatch=0;TruScore=91;MatchId=2363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:61:./.:17:10:8:35:./.:26:0:10:1:0/1:45:6:0/1:9:16:.:.:.
chr18	11581948	HG2_PB_SVrefine2PB10Xhap12_12498	A	AGGGGAGGGGAGGGGAAGGGAGGGGAGGGGAGGTGGAGGGAGGGGAAGAGAGGGGAGGGGGAGGGGAGGGGGAGGGGGAGGGGGATGGGGAGGGGGAGGGGGAT	20	PASS	ClusterIDs=HG2_PB_pbsv_17226:HG4_PB_HySA_24997:HG3_PB_HySA_25862:HG2_PB_assemblyticsfalcon_11310:HG2_PB_SVrefine2Falcon1plusDovetail_5072:HG4_PB_pbsv_17124:HG2_PB_HySA_31297:HG3_PB_pbsv_16894:HG4_PB_SVrefine2PBcRDovetail_8603:HG3_PB_SVrefine2PBcRDovetail_8345:HG2_PB_SVrefine2PBcRplusDovetail_4657:HG2_PB_SVrefine2PB10Xhap12_12498:HG2_10X_SVrefine210Xhap12_11952:HG2_PB_SVrefine2Falcon2Bionano_8481:HG3_PB_SVrefine2Falcon1Dovetail_10637:HG2_PB_PB10Xdip_13964;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11952:HG2_PB_SVrefine2PB10Xhap12_12498:HG2_PB_SVrefine2PBcRplusDovetail_4657:HG3_PB_SVrefine2PBcRDovetail_8345:HG4_PB_SVrefine2PBcRDovetail_8603;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0995025;ClusterMaxSizeDiff=0.0990099;ClusterMaxEditDist=0.231156;PBcalls=15;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=103;DistBack=7222;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=18:11581949-11581966;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:0:9:0:13:./.:2:8:0:16:./.:1:5:./.:.:.:.:.:.
chr18	11874441	HG2_10X_SVrefine210Xhap12_11954	T	TAAATTAGCTGGGCGTGGTGGTGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGTGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAGTGCAGACTTATGCATGGTGACAGGAAGCACATCGGTGGTTGCCTCGGGAAGGAGGGCTGCAGAGGGAATGCAGACGCTGTGGGAGGGTCCGGCTGTGCTCATTGTTTCCATGTAGTGATGCTGGCATGACAACACACACGCCAGAACTCCTCAGACGGGCCAGGCGTGGTGGCTCACACCTATAATCCCAACACTTTGGGAGTCTGAGGCGTGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCGTGGCCAACACGGTGAAACCCCATCTCTACTAAAAACACAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5074:HG3_PB_pbsv_16897:HG4_PB_pbsv_17127:HG2_PB_pbsv_17228:HG2_PB_PB10Xdip_13966:HG3_Ill_GATKHCSBGrefine_11205:HG2_Ill_GATKHCSBGrefine_11294:HG4_Ill_manta_3907:HG4_Ill_MetaSV_2147:HG4_Ill_GATKHCSBGrefine_11644:HG3_Ill_MetaSV_2228:HG2_Ill_MetaSV_2083:HG2_PB_HySA_31301:HG4_PB_HySA_25001:HG4_PB_SVrefine2Falcon1Dovetail_10648:HG3_PB_SVrefine2PBcRDovetail_8347:HG2_PB_SVrefine2PBcRplusDovetail_4659:HG2_PB_SVrefine2PB10Xhap12_12500:HG2_PB_SVrefine2Falcon2Bionano_8483:HG2_Ill_SVrefine2DISCOVARplusDovetail_5448:HG2_10X_SVrefine210Xhap12_11954:HG4_Ill_SVrefine2DISCOVARDovetail_12000:HG3_Ill_SVrefine2DISCOVARDovetail_12244:HG3_PB_SVrefine2Falcon1Dovetail_10638:HG4_PB_SVrefine2PBcRDovetail_8605;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11954:HG2_Ill_SVrefine2DISCOVARplusDovetail_5448:HG2_PB_SVrefine2Falcon2Bionano_8483:HG2_PB_SVrefine2PB10Xhap12_12500:HG2_PB_SVrefine2PBcRplusDovetail_4659:HG3_PB_SVrefine2PBcRDovetail_8347;NumExactMatchSVs=6;ClusterMaxShiftDist=0.07431;ClusterMaxSizeDiff=0.0721868;ClusterMaxEditDist=0.198745;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=455;DistBack=48073;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=170;REFWIDENED=18:11874442-11874611;PctSeqSimilarity=0.9842;PctSizeSimilarity=1;PctRecOverlap=0.7495;SizeDiff=0;StartDistance=-114;EndDistance=-114;GTMatch=0;TruScore=91;MatchId=2366.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:0:27:1:24:./.:0:3:0:0:1/1:0:18:1/1:3:68:.:.:.
chr18	13152464	HG2_Ill_svaba_21219	A	ACAGGTTTTTCACTGGCTACTCAAGCTTCCCAACATTTTACAGTGCCATCAGTGTATCCTGGATATACACTGTCACAGGAATTCGCAAATTTGACTC	20	PASS	ClusterIDs=HG2_Ill_manta_4612:HG4_PB_pbsv_17138:HG2_PB_pbsv_17241:HG3_PB_pbsv_16912:HG2_Ill_breakscan11_4762:HG3_PB_assemblyticsfalcon_11309:HG3_PB_SVrefine2Falcon1Dovetail_10646:HG4_PB_SVrefine2Falcon1Dovetail_10652:HG4_Ill_svaba_21150:HG4_Ill_manta_3909:HG4_Ill_Krunchall_23332:HG4_Ill_GATKHCSBGrefine_11650:HG4_Ill_Cortex_1486:HG4_Ill_250bpfermikitraw_22302:HG4_Ill_150bpfermikitraw_21478:HG3_PB_SVrefine2PBcRDovetail_8351:HG3_Ill_svaba_21424:HG3_Ill_manta_3765:HG3_Ill_Spiral_17538:HG3_Ill_SVrefine2DISCOVARDovetail_12249:HG3_Ill_Krunchall_22611:HG3_Ill_GATKHCSBGrefine_11212:HG3_Ill_Cortex_1543:HG3_Ill_250bpfermikitraw_22035:HG3_Ill_150bpfermikitraw_21426:HG2_Ill_svaba_21219:HG2_Ill_SpiralSDKrefine_7154:HG2_Ill_GATKHCSBGrefine_11302:HG2_Ill_Cortex_3625:HG2_Ill_250bpfermikitraw_22692:HG2_Ill_150bpfermikitraw_21402:HG2_10X_SVrefine210Xhap12_11963;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11963:HG2_Ill_150bpfermikitraw_21402:HG2_Ill_250bpfermikitraw_22692:HG2_Ill_Cortex_3625:HG2_Ill_GATKHCSBGrefine_11302:HG2_Ill_SpiralSDKrefine_7154:HG2_Ill_svaba_21219:HG3_Ill_150bpfermikitraw_21426:HG3_Ill_250bpfermikitraw_22035:HG3_Ill_Cortex_1543:HG3_Ill_GATKHCSBGrefine_11212:HG3_Ill_Krunchall_22611:HG3_Ill_SVrefine2DISCOVARDovetail_12249:HG3_Ill_Spiral_17538:HG3_Ill_manta_3765:HG3_Ill_svaba_21424:HG3_PB_SVrefine2PBcRDovetail_8351:HG4_Ill_150bpfermikitraw_21478:HG4_Ill_250bpfermikitraw_22302:HG4_Ill_Cortex_1486:HG4_Ill_GATKHCSBGrefine_11650:HG4_Ill_Krunchall_23332:HG4_Ill_manta_3909:HG4_Ill_svaba_21150;NumExactMatchSVs=24;ClusterMaxShiftDist=0.109453;ClusterMaxSizeDiff=0.109453;ClusterMaxEditDist=0.308458;PBcalls=7;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=13;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=96;DistBack=8;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=18:13152465-13152466;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:32:0|1:18:3:1:14:0|1:27:0:0:18:0/1:34:36:./.:.:.:.:.:.
chr18	13823327	HG4_PB_SVrefine2Falcon1Dovetail_10656	A	ACCCACCCACCCACCGACCCAACCAACTAACCAACCAAGCAACCACCCACCCAACCACCCATCCACCCACCCACTGACCCAACCAACCAACCAAGCAACCACCCACCCAACGAC	10	PASS	ClusterIDs=HG2_PB_pbsv_17245:HG3_PB_HySA_25899:HG2_PB_SVrefine2Falcon1plusDovetail_5085:HG4_PB_SVrefine2PBcRDovetail_8611:HG4_PB_SVrefine2Falcon1Dovetail_10656:HG3_PB_SVrefine2PBcRDovetail_8354:HG3_PB_SVrefine2Falcon1Dovetail_10651:HG2_PB_SVrefine2PBcRplusDovetail_4667:HG2_PB_SVrefine2PB10Xhap12_12512:HG2_PB_SVrefine2Falcon2Bionano_8489:HG2_PB_PB10Xdip_13995:HG4_PB_HySA_25024:HG2_PB_HySA_31339:HG2_PB_assemblyticsfalcon_11338:HG3_PB_assemblyticsfalcon_11319;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8489:HG2_PB_SVrefine2PB10Xhap12_12512:HG2_PB_SVrefine2PBcRplusDovetail_4667:HG3_PB_SVrefine2Falcon1Dovetail_10651:HG3_PB_SVrefine2PBcRDovetail_8354:HG4_PB_SVrefine2Falcon1Dovetail_10656:HG4_PB_SVrefine2PBcRDovetail_8611;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0627803;ClusterMaxSizeDiff=0.0627803;ClusterMaxEditDist=0.190045;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=113;DistBack=23;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=576;REFWIDENED=18:13822924-13823499;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:1/1:0:11:0:9:./.:19:118:14:94:./.:0:0:./.:.:.:.:.:.
chr18	13982052	HG2_10X_SVrefine210Xhap12_11969	T	TTCCTATATTACTTAGTAAGAATTACACGTGCATTGGCTACAACACATGGAGCTTATTCTCTGAGAAAGCCTCATCAATGTGGTGACACATCCTTCATTTTAACAGCTACCATATGGCTAATTCCATTTGCTTTTTTGTTTTGTTTTGTTTTTCTAGAGGAGAAAACTATCAGCTATATGGTGAATATTAGAGGACTTCAAGCCTATACAGAGAAATTTGACCTACAGGCTTCTGGCAGAACTGTCTCTGAGAGCAACAGATACCGGTTCCCCTGGAGGCCTCCTCTCTCTATCCACACTGCATGTGGAATCTAGTAGGATTTCTTTTTACTGCTCACTGTAATGTTATTCTGGGCTGTAAGAACTTTGTGCTTTGTATATCCTTCAGCTGCTGTGAGATTCAAAACACTTCTGCTGCTATGCTGAATGTTCTATTCAAAGCTAGCAACTGCAAGAAGTGGAGTAGACTATTAACCTGGTACCTTAGCAAAAGACTTAGTGTATATTCTTTGATTTTCCCTAGCTGGGGAGAAAGAAGCAAACC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4764:HG2_PB_pbsv_17247:HG4_PB_pbsv_17145:HG2_PB_assemblyticsfalcon_11339:HG3_PB_assemblyticsfalcon_11320:HG4_PB_HySA_25028:HG4_PB_SVrefine2Falcon1Dovetail_10657:HG3_PB_SVrefine2PBcRDovetail_8355:HG2_PB_SVrefine2Falcon1plusDovetail_5087:HG4_PB_SVrefine2PBcRDovetail_8613:HG2_PB_SVrefine2PBcRplusDovetail_4668:HG2_PB_SVrefine2PB10Xhap12_12514:HG2_PB_SVrefine2Falcon2Bionano_8490:HG2_10X_SVrefine210Xhap12_11969:HG2_Ill_MetaSV_2090:HG3_Ill_MetaSV_2232:HG3_Ill_GATKHCSBGrefine_11215:HG4_Ill_MetaSV_2152:HG3_PB_SVrefine2Falcon1Dovetail_10652:HG2_Ill_GATKHCSBGrefine_11307:HG3_Ill_manta_3768:HG2_PB_PB10Xdip_13997;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11969:HG2_PB_SVrefine2Falcon2Bionano_8490:HG2_PB_SVrefine2PB10Xhap12_12514:HG2_PB_SVrefine2PBcRplusDovetail_4668:HG4_PB_SVrefine2PBcRDovetail_8613;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0629496;ClusterMaxSizeDiff=0.0629496;ClusterMaxEditDist=0.195423;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=543;DistBack=8;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=18:13982053-13982056;PctSeqSimilarity=0.9982;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2370.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:25:0:15:1/1:0:19:0:18:1/1:0:14:1/1:3:79:.:.:.
chr18	19670982	HG2_Ill_GATKHCSBGrefine_11312	T	TAACATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCAGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATTTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGAGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_31388:HG3_PB_assemblyticsfalcon_11331:HG3_PB_SVrefine2Falcon1Dovetail_10658:HG3_PB_pbsv_16927:HG2_PB_assemblyticsfalcon_11350:HG3_PB_HySA_25941:HG2_PB_SVrefine2Falcon1plusDovetail_5095:HG2_PB_pbsv_17261:HG2_PB_SVrefine2Falcon2Bionano_8497:HG3_PB_SVrefine2PBcRDovetail_8364:HG3_Ill_MetaSV_2238:HG3_Ill_GATKHCSBGrefine_11222:HG2_Ill_GATKHCSBGrefine_11312;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11312:HG3_Ill_GATKHCSBGrefine_11222:HG3_Ill_MetaSV_2238;NumExactMatchSVs=3;ClusterMaxShiftDist=0.148867;ClusterMaxSizeDiff=0.148867;ClusterMaxEditDist=0.211604;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=318;DistBack=12441;DistForward=20722;DistMin=12441;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:19670983-19661236;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2371.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:23:26:./.:8:10:12:9:1|0:0:7:28:0:0/1:27:7:0/1:7:37:.:.:.
chr18	19705150	HG3_PB_SVrefine2PBcRDovetail_8365	A	AAAAAACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTAGTAGAGACGGGGTTTCACCTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_25942:HG3_PB_pbsv_16928:HG2_PB_pbsv_17262:HG4_PB_assemblyticsfalcon_11146:HG2_PB_assemblyticsfalcon_11352:HG3_PB_assemblyticsfalcon_11332:HG2_Ill_breakscan11_4765:HG4_PB_SVrefine2Falcon1Dovetail_10665:HG2_PB_SVrefine2Falcon2Bionano_8498:HG2_PB_SVrefine2Falcon1plusDovetail_5096:HG3_PB_SVrefine2Falcon1Dovetail_10659:HG3_PB_SVrefine2PBcRDovetail_8365:HG2_PB_HySA_31389;NumClusterSVs=13;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_8365;NumExactMatchSVs=1;ClusterMaxShiftDist=0.102719;ClusterMaxSizeDiff=0.102719;ClusterMaxEditDist=0.182622;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=5144;DistForward=52754;DistMin=5144;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=18:19705151-19705161;PctSeqSimilarity=0.9864;PctSizeSimilarity=0.9731;PctRecOverlap=0.9701;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2372.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:49:0|1:24:0:0:36:./.:0:3:29:0:0/1:33:5:0/1:8:41:.:.:.
chr18	19811900	HG2_PB_SVrefine2Falcon2Bionano_8499	C	CGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACCCTTCCACCCATCCACCCACCCATCCATCCATCTGTCCATTCGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCACTCATCCATCTACTCATCCATCCATCCATCCATCCACCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATACATACATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATATATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCTACTCATCCATCCATCCATCCATCCATACATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCCATACATACATCTATCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACGTCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATACATCCATACATACATCTATCCATACATACCTACATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATACATCTATCCATACATACCTACATACATACATCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4678:HG4_PB_HySA_25077:HG3_PB_HySA_25943:HG2_PB_pbsv_17263:HG3_PB_pbsv_16929:HG2_PB_SVrefine2Falcon2Bionano_8499:HG2_PB_SVrefine2PB10Xhap12_12529:HG3_PB_SVrefine2Falcon1Dovetail_10660:HG4_PB_SVrefine2Falcon1Dovetail_10666:HG2_PB_SVrefine2Falcon1plusDovetail_5097:HG4_PB_SVrefine2PBcRDovetail_8622;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8499;NumExactMatchSVs=1;ClusterMaxShiftDist=0.321812;ClusterMaxSizeDiff=0.321812;ClusterMaxEditDist=0.3462;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1275;DistBack=-921;DistForward=18;DistMin=-921;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=151;REFWIDENED=18:19811892-19812042;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=0.9757;SizeDiff=0;StartDistance=-31;EndDistance=-31;GTMatch=1;TruScore=99;MatchId=2373.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:86:1/1:0:33:2:25:./.:11:114:5:74:./.:1:16:./.:13:146:.:1439:.
chr18	20130688	HG2_10X_SVrefine210Xhap12_11977	A	ATAGTGATGGTAATGCAACATAGTTAGAATCACTGTCTGTGTGCTTCCATTTGCCCATCTAGACTTTGAGCTTTGGGATGCAGGAATCCCTGAACCCCCTCTACCAAGCATACTGCTGGACCCATTAAAGGTGCCCAATAAATGTGTGTTCAACTCAACGTGACCATGCTGTCCAGACTTGTGGGTAGATGCTTAGCTTTAACATGACTAGTCACCTTTCTGCCAAGGAGAATAAAGTGTTTCATGTTTCTTGCCTTTCTCCTTTCTCATAGCAGTGGGTAGGTGAAACAGGGGCACATCCACAATATGGAAATTAGAAACTTAAAGGGACACAAAAATTTAGGGTTTGTCTAGGATCACACATGGCACATTCATCGCCAAAGTCCTGATGTGCAGGTCTGAGGGTCTTTCAACAGCGTAGCCTGTCATCCCAGGTAAGAACGGCAATAATATCTAACTTACTAATGCATAGTTTATATTGTCTCCCAGAAAGATGATTGCTGCATTTTTTGTGTTGCCATGCTCTCTTTAAAATAATACTATAATACATAGTATTGTTTTATAGTATTATTTTATAATAAATAGTATTTATTTATAGGTTTATTTTATAATAATTAGATAAATACAACCATTTTTTAGAGTTGAGGGCCAAACAGTAAGCATGGTCAACAAACAGACAAACAAATACATTCTTATTGTTCTCAGTTTCTTTCCTCTTCCTAAAGTGGGAATTGGAATTTATCTTCTGGCTGAAGATTCCCACAATTTATAACTGAAGTCGTTCAACGTCAACCATGAGCAATCCTTGGACTCTACTATAGGATGGCCCTTATTGAGACCTTAGGTGTACTTCTGTTTAAATTTTGTGATTAGAAACATAAAATCAATCATAGTGAAACCCAGTAGACTTGGTGATCTGAGAGGGATTTTGTTTCTAGTACTTGAGTTGATTTATTTCTCTGTTTGTTTATTTATACAAAATTGCCTTAGATTTATTCCCACTGACAATGAATTTAAAGTATTTAGGAAAACTTTGCTAAAGTTTCCTGAACACATTGGATCAGGGGACTGGAACGGGGCGGTTAATTTCTTTCCTTTACCCTACTTTTCTCTTCTTCTTTCTCCTCTTTCTTCTTTTTCTCTCCTAATCAGAGTCACAGGGAGAAATGCTGGAAGAGAGAGCACTTAAGCCCATTTGGAAAAGTGTTTCTGCTCCTATATTCTTGGGATCTGTGAACGCATAAAGCTGCTAATAACAGGATTTGTGGGAAAGAAGTAAAGAGCTATTTCTCATGATGAATTTGGGTTGAGTCATCAAGAGAAAGCATAACATTTTATTATGAATGACTACACCTGTATTAGTCTTTTTCACACTGCTATAAAGAATACCTGAGACTGGGTAATTTATAAAGGAAAGAGGTTTAATTGACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATCATGGCAGAAGGTGAAGGGGAAACAGGCACATCTTACGTAGCAGCAGGAGAGAGAGAGAGCAGAGAGAGGGGAAACTTCCATTTATAAAACCTCCAGATCTCATGAGAACTCACTCACTATCACAAGAACAGCATAGGGGAAACCTCCTCTTAGTATGCATGCTTAAGTCACTTGCCCAGCTCCTGAGATTTTATCGGGAAGCAGATGATTACCAGATTTAGGTTTTTCCTATCTATGTGGAGACTGCCTTTCCCTGGTGCTGACTGCAGCTAATTATTATTTTAGAGAGACAGTTAACAACTGCCTGACCATCATCACCTGATGGTTGCTGGACATCCGTGGTATGTTAGGGGAAATGGGAGGCCTCTCCTGCACTGCCCTGCTCATGTCTCACTAGCTACCTACCATAACACATGGATTCCAGTTTCTGGCCTGTATCATTTTTCCTCTCCATAAAGAGCTTCTTTCAACTTTCTTACAGGGCTGATCTGCTGGAGACGAATTCCCTCATTTTTGTTTGTCTAAGAAGGTCTTTATTTCTCCTTCGCTTTAAAAAAAAGCATATACTATATTTTAGAGCAGTTTTAGATTTACAGAAAAATTAACAGAGAGTACACAGTTTCCTCCGTCACTTCCATCCACACACAGTTTCCCTTATCAACGTTTTGCATTGGTATGATACATTTGTTACAATGAAAAACCAATACTGATACATTATTACATCCCTAGTTTACATTAGAACTCACTCTTTGCATTGTACATATTTTTGGATTGTGAGGAATGCCTAATGGCAGGTATCCACCACAGTATGGTGCAGAGTAGTTTCACTGCGCTAAAAACCCTTTGTGCTTCCTTTATTCATCCGTCTCCTTTTCCCTTTCCCACCCCACGTCCCACCCCTTGCAATTACTGCTCCTTTTACTGGCTCTATCATTTTGCCTTTTCCAGTATGTCATATAGTTGGTATCACATAGAATGTAGCTTTTCAGACTGACTTATGTTACTTAGCAATGTGTATTTAAAATTCCTCCAATGTCTTTTCACGGTTTGAAAGCTCATTTCTTTTTTAGCACTGAATAATATCCCCTTATGCAGATGTACCACAGTTTGTTTATCCACTTGCTTATTTAAGGACATACTGGTTGCCTCCCATTTTTGGCAACTATGAATAAAGCTGCTGTAAACATTTATGCACGGACTTTTGTGTGGACATAGCTTTCAACTCATTGGAATAAATACCTAGAAGCATCGTCACTGGATTGTATGGTAGACTATGCTTAGCTTTATAAGAAATTGCCAAACTGTCTTCCAAAATGATTGTACCATTTTGTATTTCCACCAGCAATGAATGAGAGCTCCTATTGCTTCACAACTTCGCAGCATTTGGCATTGTCAGTGTTTTGGATTTTTGCCACTCTATAAGTGGTACCCCATTGTTGTTTTAATTTGCAATTCCCTAAAGTGCATCTTTTCATATGCTTATTTGCCATCCGTATATCCCCTTTGGTGAAATGTCTGTTAGGTCTTTTACCCACCTTTTAGTTGAGTTGTTTGTTTCCTTATGGTTGAGGTTTAGCAGTTCTTTGTATATTTTAGCTACAAACCCTTTATGAGACATATGTTTCACAAATATTTTCTCTCGGTCTGTGGCTTGGGTTGTCTTTTCATTCTCTTAATTTCCTTCACTTTTGAAGAATAGTTTATAGAACTCTAGATTGGTGGATTTTTTTTTCTTTTAACACATTAAATATTTCAACCTACTCTCTTGTTGTTCACATGGTTTCTGATGAGAAGTCCAATGGAATTTTTATGCTTGTTCCACTGTGGGTAAGGTGTAAGGTGTTCTTATTTCTTTGGCTTCTTTCAGGATTTTCTGTTTGTCTTTGGTTTTCTGCTTTTTTTTTTTTTTCTTTTTTTGAGATGGAGTTTCACTATTGTTGCCCAGGCTGGAGTGCAATGGCAAGATCTCGACTCACTGCAACCTCTGCCTTCCGGGTCCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCGCCACCACGCCCAGCTAATTTTTTGCATTTTTAGTAGAGATGGGGTTTTACTATGCTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTACCAGGATTACAGGCATGAGCCACTGCGCCCAGCCCTGCAATTTAAATATGATATGTCAAGATGTATACTTTTTTATTTTTTCTTTCTTTTTTTTTTTTTTTTAGACAGGGTCTCACTCTCATCACCCAGGCTAGAATGTAGAGGTGTGATCACAGCTCACTGCAACCTCGACCACCCAGGCTCAGGTGATTCTCCTGCCTCAGCCTTCCCAGTAGTTGGAACTACAGTCACATACCACCACACCCGGTTAATTTTTTGTATTTTTTGTAGACACAGGGTTTCACCATGTTGCCCTTTCTGGTCTCAAACTCCTGTGCTCCGGTGATCCTCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACCTGCATAGCCACTGTGCTCAGCCAGTGTATACTTTTTTATATATACCCTACTTAGTGTTCTCTAAGCTTCCTAAATCTGTGTTAGATGAGACAGGAGCCTGGGGGATCAGGAGCTATGAATATTAATTGTAGTATAAAACTGTTTGTTTTGGACCTAATTTTGTATTATCTGCTGCTGTAAGCAGTGTTGGGACCACAGGTGTTGAAACGAGTGAGAAGGATAAGCCTTTCAGAGGACTTAACTTGAAGAAAGGTAGAGATGCTAGGATTGCCTCAAACAGAATTCTGGAGCAAGAGTATGGCTGGATGATCCATGGTGCTGTAACTGGCTCATGTTTGAAAGGTGAAAAGGAAGGTCTCAGACTGGTAGACAAAAATGTAAATGAGACAGAAGGTGAACAGAAGGATTGGATTATTCAAAAGTTGGGATAGAATGGATGAGCCAATTAAATATAAACTCTAAGTAGTTGAAAGCTGTCCAGTGAGCTAAGCGCATCAAGGCGCTGTGAGTGACCATGGGTGGAAACTGGATTTTGTGTGTGTGACCAGTAGAAACCAGCCCATTAAAGTTCATCAAGCTTGGGAATTACAGACTCACTATGGCTACTTTTCTGCCTTGGACATTTCACATGCAGAGTGAGAAGGTTATAACTGAGACTTTCACCAACAACAGGCCGCACCAGACATTTACATGTTGTTGTTCAGTCGTTCATCATCCCAAATTAGCAACTAACATACCTAATTGACAACTTCAGTCCGTCTGTAAGCCCCATTCCATGCCTACCTCTAACTTAATCTCATTATTTCCTTGTGATTAACCCAGATTTGGTGATATAATACTATCAACCAGTCCAGTTTGCTCCAGTTCAGGAGCAGAAAAAAAGAAATCTCTCCAGTGACTCTATATTTTTTCAGAATTTTTTTTTATGATGAAAATATCTTGCTTCAATCTCATTGCTTCATAGTTATCTCTGATGTACAGGCCAACCCTAAGATTTCTTCACATTTTAGTTACATAGTCTTGATCTTTAAAAATGAACTGACTATATTATGGTACAGAAACAAAATAATGGAGGGAGAACAGAACAAAATAAATGGGAAGGCACAGCCGTCACAAGGACATGATCTATAAGGGGATCAAGACAAAACAAAGCCAAGCAACACGGCTTCTTGTTCTGCTGTAAGAACAAGTGTAAGCAGAGAAGTGCCCATGGTAACAACTTCTTCACAGCCTTGGGCATGAGCTTCGCTGGAGATTTGTTTCATGATGTGGGCCTGGAGTAAAATGTTCATTCAAAAACATCTAAGTGCTTACTACGTGCCAGACATTATTTCTAGGCATTAGGGATATAGCAATGAAGAAAACTAAGTATTTCCTGTCCACATGGAGACCACATTTTGTGGCTGTGAGGGACAGCATCCATAACCAAAATAAATAGTATATCAAATGACGATGTGTACTCTGGGAGATAAGGATGTGGTTGTGGTGTGAAATTGGCTGGGGAAGCCTTCTCTGATGCTTGAGCAAAGACCTGGAGAAGGTATGGGAGTGAGTCACCCGGCCGCAGGGAGGAGGAGCATTGCAGGCAGAAGGAACAGTTAGTATAAAATACCCAAGTCAGGAGCATTCCTGAAATGTTGAAGAAACAGAAAGCATGCCTGCAGCTGCAAAGATATGAGAAAAAGAATAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10668:HG3_PB_pbsv_16931:HG2_PB_PB10Xdip_14047:HG4_PB_pbsv_17160:HG2_PB_pbsv_17266:HG2_Ill_breakscan11_4766:HG3_PB_SVrefine2Falcon1Dovetail_10662:HG2_PB_SVrefine2Falcon1plusDovetail_5099:HG2_Ill_SVrefine2DISCOVARplusDovetail_5473:HG2_PB_SVrefine2PBcRplusDovetail_4680:HG2_PB_SVrefine2PB10Xhap12_12531:HG3_Ill_SVrefine2DISCOVARDovetail_12269:HG3_PB_SVrefine2PBcRDovetail_8368:HG4_PB_SVrefine2PBcRDovetail_8624:HG2_PB_SVrefine2Falcon2Bionano_8501:HG4_Ill_SVrefine2DISCOVARDovetail_12018:HG2_10X_SVrefine210Xhap12_11977;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11977:HG4_Ill_SVrefine2DISCOVARDovetail_12018;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0799595;ClusterMaxSizeDiff=0.0799595;ClusterMaxEditDist=0.271981;PBcalls=12;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=5692;DistBack=2103;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=18:20130689-20130691;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2374.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:105:1/1:0:30:0:24:1/1:0:17:0:10:1/1:0:32:1/1:0:583:.:5727:.
chr18	20563625	HG4_PB_SVrefine2PBcRDovetail_8626	AAAGC	TAACTATTTAGAAATTTAATTCACTTGCTTTAACCTTGTTCTGATCATTTTTTACTTGGAATCTGAAATTTGGTTTTAAGATGTACGATAACCTTGAGCCATACAAATGATTTTAAAATAATTTTAAATTATTTTAAAT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2096:HG2_10X_SVrefine210Xhap12_11978:HG4_PB_assemblyticsfalcon_11153:HG4_PB_SVrefine2PBcRDovetail_8626:HG4_PB_SVrefine2Falcon1Dovetail_10671:HG4_Ill_SVrefine2DISCOVARDovetail_12021:HG3_PB_assemblyticsfalcon_11339:HG3_PB_SVrefine2PBcRDovetail_8370:HG3_PB_SVrefine2Falcon1Dovetail_10664:HG3_Ill_SVrefine2DISCOVARDovetail_12271:HG2_PB_assemblyticsfalcon_11360:HG2_PB_assemblyticsPBcR_10982:HG2_PB_SVrefine2PBcRplusDovetail_4682:HG2_PB_SVrefine2PB10Xhap12_12532:HG2_PB_SVrefine2Falcon2Bionano_8503:HG2_PB_SVrefine2Falcon1plusDovetail_5101:HG2_PB_PB10Xdip_14048:HG2_Ill_SVrefine2DISCOVARplusDovetail_5475:HG3_PB_pbsv_16934:HG2_PB_HySA_31403:HG4_PB_pbsv_17163:HG2_PB_pbsv_17270:HG4_Ill_MetaSV_2158;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5475:HG2_PB_PB10Xdip_14048:HG2_PB_SVrefine2Falcon1plusDovetail_5101:HG2_PB_SVrefine2Falcon2Bionano_8503:HG2_PB_SVrefine2PB10Xhap12_12532:HG2_PB_SVrefine2PBcRplusDovetail_4682:HG2_PB_assemblyticsPBcR_10982:HG2_PB_assemblyticsfalcon_11360:HG3_Ill_SVrefine2DISCOVARDovetail_12271:HG3_PB_SVrefine2Falcon1Dovetail_10664:HG3_PB_SVrefine2PBcRDovetail_8370:HG3_PB_assemblyticsfalcon_11339:HG4_Ill_SVrefine2DISCOVARDovetail_12021:HG4_PB_SVrefine2Falcon1Dovetail_10671:HG4_PB_SVrefine2PBcRDovetail_8626:HG4_PB_assemblyticsfalcon_11153;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0836237;ClusterMaxSizeDiff=0.077193;ClusterMaxEditDist=0.181185;PBcalls=17;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=13;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=134;DistBack=23795;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=133;REFWIDENED=18:20563630-20563762;PctSeqSimilarity=0.9891;PctSizeSimilarity=0.9926;PctRecOverlap=0.9712;SizeDiff=-1;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:./.:0:0:0:7:1/1:0:21:0:26:1/1:0:72:./.:.:.:.:.:.
chr18	21073703	HG4_PB_SVrefine2PBcRDovetail_8629	A	ACCACACTCGGCCTCCTCCTTTTCTTATAAAGCCACCTGGGGTCCCTATCCTGATGACCTCATCTAATCCTAATTACTTCCCAAAGGCCTCCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10669:HG3_PB_HySA_25956:HG2_PB_HySA_31409:HG4_PB_pbsv_17167:HG3_PB_SVrefine2PBcRDovetail_8374:HG3_PB_pbsv_16940:HG4_Ill_250bpfermikitraw_22350:HG2_PB_pbsv_17275:HG3_Ill_250bpfermikitraw_22084:HG4_PB_SVrefine2PBcRDovetail_8629:HG4_PB_SVrefine2Falcon1Dovetail_10674:HG4_Ill_SVrefine2DISCOVARDovetail_12025;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10669:HG4_PB_SVrefine2PBcRDovetail_8629:HG4_PB_SVrefine2Falcon1Dovetail_10674:HG4_Ill_SVrefine2DISCOVARDovetail_12025;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0932643;ClusterMaxSizeDiff=0.0842105;ClusterMaxEditDist=0.238342;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=92;DistBack=15094;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=182;REFWIDENED=18:21073704-21073885;PctSeqSimilarity=0.9901;PctSizeSimilarity=1;PctRecOverlap=0.914;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=96;MatchId=2376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:21:./.:9:6:9:14:./.:3:0:2:4:0/1:28:12:./.:.:.:.:.:.
chr18	21261344	HG3_Ill_250bpfermikitraw_22085	G	GGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGATGGAAAGAAAGAAAGAAAGAAAGATGGAAAGAAAGAAAGAAA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5479:HG3_PB_HySA_25958:HG2_PB_pbsv_17278:HG2_PB_HySA_31411:HG3_Ill_GATKHC_27125:HG3_Ill_GATKHCSBGrefine_11225:HG3_Ill_250bpfermikitraw_22085:HG2_Ill_GATKHC_27268:HG2_Ill_GATKHCSBGrefine_11316:HG2_PB_PB10Xdip_14050:HG2_PB_SVrefine2PBcRplusDovetail_4686:HG2_PB_SVrefine2PB10Xhap12_12535:HG3_PB_SVrefine2Falcon1Dovetail_10672:HG4_PB_SVrefine2Falcon1Dovetail_10677:HG3_PB_pbsv_16942:HG2_PB_SVrefine2Falcon1plusDovetail_5105:HG4_Ill_SVrefine2DISCOVARDovetail_12026:HG4_PB_SVrefine2PBcRDovetail_8632:HG4_PB_pbsv_17170:HG3_Ill_SVrefine2DISCOVARDovetail_12277:HG3_PB_SVrefine2PBcRDovetail_8376:HG2_PB_SVrefine2Falcon2Bionano_8507;NumClusterSVs=22;ExactMatchIDs=HG3_Ill_250bpfermikitraw_22085:HG3_Ill_GATKHCSBGrefine_11225:HG3_Ill_GATKHC_27125;NumExactMatchSVs=3;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.25;ClusterMaxEditDist=0.275;PBcalls=14;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=104;DistBack=-1;DistForward=28981;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=94;REFWIDENED=18:21261308-21261401;PctSeqSimilarity=0.9455;PctSizeSimilarity=0.9123;PctRecOverlap=0.913;SizeDiff=-10;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=2377.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:1:10:0:14:./.:1:1:3:2:./.:4:37:./.:.:.:.:.:.
chr18	23467618	HG2_10X_SVrefine210Xhap12_11992	T	TGGAATGTAAATGGACTAAACTTTCTAAAGACATAAAGTGGCTGAATGGATTTAAGAAAAAAAAAAAAAGACCTAATGCTATCTACAAGAAACACACTTTACCTATAAAGACACATAGACTGAAAATAGGGGAATGGAAAAAGATATTTCATGCATATGGAAACTAAAAAAAAAACTACTGCTATATTTATATAAGACAAAATAGATTTCAAAACAAAAGTATCAAAAGAGACAAAGAAGGTCATTATATAATGATAAAGGAGTCAATCCAGTAAAAGGATGTAACAATTGTAAATATATACGCACCAAACACTGGAGCACCCA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4767:HG4_PB_pbsv_17179:HG2_PB_pbsv_17286:HG4_PB_assemblyticsfalcon_11178:HG3_PB_assemblyticsfalcon_11362:HG2_PB_assemblyticsfalcon_11386:HG2_PB_assemblyticsPBcR_11005:HG2_PB_HySA_31425:HG4_PB_SVrefine2PBcRDovetail_8636:HG4_PB_SVrefine2Falcon1Dovetail_10685:HG3_PB_SVrefine2Falcon1Dovetail_10678:HG4_Ill_manta_3918:HG4_Ill_SVrefine2DISCOVARDovetail_12035:HG4_Ill_MetaSV_2164:HG4_Ill_GATKHCSBGrefine_11671:HG2_Ill_SVrefine2DISCOVARplusDovetail_5487:HG2_Ill_MetaSV_2100:HG2_Ill_GATKHCSBGrefine_11321:HG2_10X_SVrefine210Xhap12_11992:HG4_PB_HySA_25106:HG2_PB_SVrefine2Falcon1plusDovetail_5113:HG2_PB_SVrefine2PB10Xhap12_12543:HG2_PB_SVrefine2PBcRplusDovetail_4689;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11992:HG2_Ill_GATKHCSBGrefine_11321:HG2_Ill_MetaSV_2100:HG2_Ill_SVrefine2DISCOVARplusDovetail_5487:HG4_Ill_GATKHCSBGrefine_11671:HG4_Ill_MetaSV_2164:HG4_Ill_SVrefine2DISCOVARDovetail_12035:HG4_Ill_manta_3918;NumExactMatchSVs=8;ClusterMaxShiftDist=0.207578;ClusterMaxSizeDiff=0.207578;ClusterMaxEditDist=0.273476;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=323;DistBack=7;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=18:23467619-23467619;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2378.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:0|1:23:2:2:20:0|1:31:0:0:16:0/1:20:9:0/1:6:23:.:.:.
chr18	23794220	HG2_PB_SVrefine2PB10Xhap12_12544	T	TACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGGGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGAAGAAAGAG	20	PASS	ClusterIDs=HG4_PB_pbsv_17181:HG3_PB_assemblyticsfalcon_11366:HG3_PB_pbsv_16948:HG2_PB_pbsv_17288:HG4_PB_assemblyticsfalcon_11181:HG2_PB_HySA_31429:HG3_PB_SVrefine2Falcon1Dovetail_10679:HG2_PB_SVrefine2Falcon1plusDovetail_5114:HG4_PB_SVrefine2Falcon1Dovetail_10686:HG4_PB_SVrefine2PBcRDovetail_8637:HG2_10X_SVrefine210Xhap12_11993:HG4_Ill_GATKHCSBGrefine_11673:HG2_PB_SVrefine2PB10Xhap12_12544:HG2_PB_SVrefine2PBcRplusDovetail_4690:HG2_PB_SVrefine2Falcon2Bionano_8512:HG4_PB_HySA_25107:HG2_Ill_breakscan11_4768:HG2_PB_PB10Xdip_14065;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12544:HG4_Ill_GATKHCSBGrefine_11673;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0795107;ClusterMaxSizeDiff=0.0795107;ClusterMaxEditDist=0.216867;PBcalls=15;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=160;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=18:23794221-23794221;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2379.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:39:1/1:0:10:1:14:./.:2:11:1:12:0/1:3:13:./.:.:.:.:.:.
chr18	25230201	HG3_Ill_Krunchall_22671	T	TATATATACACATATATATATATATACGTATATATATATACATATATATATATATATTATATATATAA	20	PASS	ClusterIDs=HG2_PB_pbsv_17293:HG3_Ill_svaba_21478:HG3_Ill_Spiral_17593:HG3_Ill_Krunchall_22671:HG3_Ill_GATKHC_27147:HG3_Ill_GATKHCSBGrefine_11235:HG3_Ill_150bpfermikitraw_21477:HG2_Ill_svaba_21281:HG2_Ill_manta_4626:HG2_Ill_GATKHC_27297:HG2_Ill_GATKHCSBGrefine_11325:HG2_Ill_150bpfermikitraw_21461:HG3_PB_HySA_25986:HG3_PB_pbsv_16955;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21461:HG2_Ill_GATKHCSBGrefine_11325:HG2_Ill_GATKHC_27297:HG2_Ill_manta_4626:HG2_Ill_svaba_21281:HG3_Ill_150bpfermikitraw_21477:HG3_Ill_GATKHCSBGrefine_11235:HG3_Ill_GATKHC_27147:HG3_Ill_Krunchall_22671:HG3_Ill_Spiral_17593:HG3_Ill_svaba_21478;NumExactMatchSVs=11;ClusterMaxShiftDist=0.170543;ClusterMaxSizeDiff=0.170543;ClusterMaxEditDist=0.20155;PBcalls=3;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=18:25230200-25230203;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2380.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:57:43:1|0:10:35:42:5:./.:1:9:15:3:0/1:17:12:./.:.:.:.:.:.
chr18	25871818	HG2_PB_SVrefine2Falcon1plusDovetail_5120	T	TAATCACATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_14080:HG2_PB_pbsv_17296:HG3_PB_pbsv_16959:HG4_PB_HySA_25116:HG4_PB_pbsv_17188:HG2_PB_HySA_31442:HG4_PB_SVrefine2Falcon1Dovetail_10692:HG4_Ill_MetaSV_2168:HG4_Ill_GATKHCSBGrefine_11678:HG3_Ill_manta_3778:HG3_Ill_MetaSV_2245:HG3_Ill_GATKHCSBGrefine_11238:HG2_PB_SVrefine2Falcon2Bionano_8517:HG2_PB_SVrefine2Falcon1plusDovetail_5120:HG2_Ill_MetaSV_2105:HG3_PB_SVrefine2Falcon1Dovetail_10685:HG3_PB_HySA_25993:HG2_PB_SVrefine2PB10Xhap12_12552:HG2_Ill_breakscan11_4770;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_MetaSV_2105:HG2_PB_SVrefine2Falcon1plusDovetail_5120:HG2_PB_SVrefine2Falcon2Bionano_8517:HG3_Ill_GATKHCSBGrefine_11238:HG3_Ill_MetaSV_2245:HG3_Ill_manta_3778;NumExactMatchSVs=6;ClusterMaxShiftDist=0.150082;ClusterMaxSizeDiff=0.146819;ClusterMaxEditDist=0.217391;PBcalls=12;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=308;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=18:25871819-25871829;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:52:0|1:29:0:1:37:1|0:0:7:24:0:0/1:36:11:0/1:6:22:.:.:.
chr18	26417086	HG2_PB_SVrefine2PB10Xhap12_12556	A	AGGGAGGGGAGGGGGGAGGGGAGGGGAGGGGAGGGGAGGGGGAGGGGAGGGGAGGGGGAGGGGAGG	10	PASS	ClusterIDs=HG4_PB_pbsv_17194:HG3_PB_SVrefine2PBcRDovetail_8386:HG2_PB_PB10Xdip_14084:HG2_PB_SVrefine2PB10Xhap12_12556:HG2_PB_SVrefine2Falcon2Bionano_8520;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8520:HG2_PB_SVrefine2PB10Xhap12_12556:HG3_PB_SVrefine2PBcRDovetail_8386;NumExactMatchSVs=3;ClusterMaxShiftDist=0.107692;ClusterMaxSizeDiff=0.0152672;ClusterMaxEditDist=0.261538;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=65;DistBack=4;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=62;REFWIDENED=18:26417087-26417148;PctSeqSimilarity=0.9676;PctSizeSimilarity=1;PctRecOverlap=0.3538;SizeDiff=0;StartDistance=-42;EndDistance=-42;GTMatch=0;TruScore=77;MatchId=2382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:45:1/1:3:22:1:16:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr18	27504863	HG3_Ill_GATKHC_27170	A	AAGGGTCCAATTTCATTCTTCTGCATATGGATATGTGCCAACAATTGGATATCCATATGCAGAAGAATGAAATTGGACCCTTTTACGGAAG	20	PASS	ClusterIDs=HG2_PB_pbsv_17309:HG3_PB_HySA_26009:HG4_PB_pbsv_17202:HG2_Ill_breakscan11_4771:HG3_PB_pbsv_16973:HG4_Ill_manta_3923:HG4_Ill_GATKHC_27238:HG4_Ill_GATKHCSBGrefine_11690:HG3_Ill_manta_3782:HG3_Ill_Spiral_17616:HG3_Ill_Krunchall_22687:HG3_Ill_GATKHC_27170:HG3_Ill_GATKHCSBGrefine_11248:HG3_Ill_250bpfermikitraw_22125:HG3_Ill_150bpfermikitraw_21498:HG2_Ill_manta_4633:HG2_Ill_SpiralSDKrefine_7220:HG2_Ill_Krunchall_23104:HG2_Ill_GATKHC_27310:HG2_Ill_GATKHCSBGrefine_11336:HG2_Ill_250bpfermikitraw_22773:HG2_Ill_150bpfermikitraw_21475:HG2_PB_PB10Xdip_14089:HG4_PB_SVrefine2PBcRDovetail_8644:HG4_PB_SVrefine2Falcon1Dovetail_10698:HG4_Ill_SVrefine2DISCOVARDovetail_12055:HG3_PB_SVrefine2PBcRDovetail_8389:HG3_PB_SVrefine2Falcon1Dovetail_10690:HG3_Ill_SVrefine2DISCOVARDovetail_12296:HG2_PB_SVrefine2PBcRplusDovetail_4699:HG2_PB_SVrefine2PB10Xhap12_12558:HG2_PB_SVrefine2Falcon2Bionano_8522:HG2_PB_SVrefine2Falcon1plusDovetail_5126:HG2_Ill_SVrefine2DISCOVARplusDovetail_5505:HG2_10X_SVrefine210Xhap12_12006;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21475:HG2_Ill_250bpfermikitraw_22773:HG2_Ill_GATKHCSBGrefine_11336:HG2_Ill_GATKHC_27310:HG2_Ill_Krunchall_23104:HG2_Ill_SpiralSDKrefine_7220:HG2_Ill_manta_4633:HG3_Ill_150bpfermikitraw_21498:HG3_Ill_250bpfermikitraw_22125:HG3_Ill_GATKHCSBGrefine_11248:HG3_Ill_GATKHC_27170:HG3_Ill_Krunchall_22687:HG3_Ill_Spiral_17616:HG3_Ill_manta_3782:HG4_Ill_GATKHCSBGrefine_11690:HG4_Ill_GATKHC_27238:HG4_Ill_manta_3923;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0756757;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.329787;PBcalls=13;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=90;DistBack=-8;DistForward=11458;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=18:27504860-27504871;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:2:13:1:24:./.:1:32:3:26:1/1:1:56:./.:.:.:.:.:.
chr18	29520758	HG2_PB_HySA_31472	C	CCAATTTTTAATTATACTGTGACTCACATTATATTTCAATTAGACAGCACTGCTCTATGGTGTAAATACATAATTCTAAATACTGTCAGGAGATAAGATGATTAGAACACAGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCTTCTCGAGTAGCTGGACTACAGGCCGCACCACACGCCAGCTAATTTTTGTATTTTTAGTAGAAACGGGGTTTCACCATGTTGCCAGGATGGTCTCGAACTCCTGACCTCGTGATCCACCGCCTCGCCTCCAAAGAGCTGGGATTACAAGCGTGAGCCACGCGCCG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12012:HG2_PB_pbsv_17317:HG3_PB_pbsv_16985:HG2_PB_HySA_31472:HG2_PB_SVrefine2Falcon1plusDovetail_5135;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_31472;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0837209;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.183459;PBcalls=4;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=309;DistBack=177;DistForward=18701;DistMin=177;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=327;REFWIDENED=18:29520548-29520874;PctSeqSimilarity=0.9821;PctSizeSimilarity=0.945;PctRecOverlap=0.3272;SizeDiff=-18;StartDistance=211;EndDistance=211;GTMatch=0;TruScore=75;MatchId=2384.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:28:./.:15:4:6:9:./.:54:13:26:0:0/0:53:0:0/1:14:7:.:.:.
chr18	31533191	HG4_Ill_GATKHCSBGrefine_11700	T	TTTGTGTAGGATATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCTCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4773:HG2_PB_pbsv_17322:HG3_PB_pbsv_16990:HG4_PB_pbsv_17215:HG4_PB_HySA_25149:HG2_PB_assemblyticsPBcR_11072:HG2_PB_assemblyticsfalcon_11452:HG3_PB_assemblyticsfalcon_11423:HG3_PB_SVrefine2Falcon1Dovetail_10703:HG4_PB_SVrefine2PBcRDovetail_8650:HG4_Ill_SVrefine2DISCOVARDovetail_12067:HG4_Ill_MetaSV_2174:HG4_Ill_GATKHCSBGrefine_11700:HG3_Ill_MetaSV_2253:HG2_PB_SVrefine2PBcRplusDovetail_4712:HG2_PB_SVrefine2PB10Xhap12_12573:HG2_PB_SVrefine2Falcon2Bionano_8531:HG2_Ill_SVrefine2DISCOVARplusDovetail_5516:HG2_Ill_MetaSV_2113:HG2_Ill_GATKHCSBGrefine_11349:HG2_10X_SVrefine210Xhap12_12018:HG4_PB_SVrefine2Falcon1Dovetail_10712:HG2_PB_SVrefine2Falcon1plusDovetail_5141:HG2_PB_HySA_31486:HG2_PB_PB10Xdip_14109;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12018:HG2_Ill_GATKHCSBGrefine_11349:HG2_Ill_MetaSV_2113:HG2_Ill_SVrefine2DISCOVARplusDovetail_5516:HG2_PB_SVrefine2Falcon2Bionano_8531:HG2_PB_SVrefine2PB10Xhap12_12573:HG2_PB_SVrefine2PBcRplusDovetail_4712:HG3_Ill_MetaSV_2253:HG4_Ill_GATKHCSBGrefine_11700:HG4_Ill_MetaSV_2174:HG4_Ill_SVrefine2DISCOVARDovetail_12067;NumExactMatchSVs=11;ClusterMaxShiftDist=0.16458;ClusterMaxSizeDiff=0.16458;ClusterMaxEditDist=0.220217;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=283;DistBack=110045;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=18:31533192-31533208;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9965;PctRecOverlap=0.993;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:93:./.:0:6:2:3:1/1:0:6:0:8:1/1:0:14:./.:.:.:.:.:.
chr18	34863871	HG3_Ill_SVrefine2DISCOVARDovetail_12321	G	GCAACATACACACACACACACCAATACATGCACCACGCATATAGCCCAACACACACATACGCATACACACACCAATACATGCACCATGCATATACCCCAACATACACACACACACACACACTGCAATACACACACCACACATACACCCCAACACACACACACACACATACAGACACCAATACATACACCATGCATATACCCCAACACACACACACCCCCAATACACTCACAACACATACACCCCAACACACACACACCCCCAATACACACACCACACATATACCCCAACACACACACACACACACCCAATACACACACCACACATATACCCCAACACACACACACCAATACATGCACCAACACATATACCCCAACATACACACACACCCCCAACACACACCAAAGCATATACGCCAACACACACACACATACACAGCAATGCATTACCCCAACATACACACACAGACACACACACAATACACACACCAATACACACCAATGCATATACCCCAACATACACACATATAGCAACATACACCCTAACACACATACATACACATACACACACCAAATAGACACACACCCCAACACACACAACCAACACCCCCACACACCCAACACACACACATACACGTACACACACATCAACACATAACTATGCACCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5146:HG3_PB_pbsv_17001:HG2_PB_PB10Xdip_14118:HG3_Ill_GATKHCSBGrefine_11268:HG4_Ill_manta_3930:HG4_Ill_MetaSV_2178:HG3_Ill_MetaSV_2260:HG2_Ill_MetaSV_2116:HG4_PB_HySA_25175:HG4_PB_pbsv_17223:HG4_PB_SVrefine2Falcon1Dovetail_10717:HG2_PB_pbsv_17329:HG3_PB_SVrefine2Falcon1Dovetail_10710:HG2_PB_assemblyticsPBcR_11089:HG2_PB_assemblyticsfalcon_11470:HG4_Ill_SVrefine2DISCOVARDovetail_12087:HG3_PB_SVrefine2PBcRDovetail_8409:HG3_Ill_SVrefine2DISCOVARDovetail_12321:HG2_PB_SVrefine2PBcRplusDovetail_4716:HG2_PB_SVrefine2Falcon2Bionano_8537:HG2_PB_SVrefine2PB10Xhap12_12578:HG2_Ill_SVrefine2DISCOVARplusDovetail_5527:HG4_PB_SVrefine2PBcRDovetail_8654;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_4716:HG3_Ill_SVrefine2DISCOVARDovetail_12321:HG3_PB_SVrefine2PBcRDovetail_8409:HG4_Ill_SVrefine2DISCOVARDovetail_12087;NumExactMatchSVs=4;ClusterMaxShiftDist=0.269781;ClusterMaxSizeDiff=0.269781;ClusterMaxEditDist=0.299925;PBcalls=15;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=664;DistBack=60860;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=18:34863872-34863927;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.994;PctRecOverlap=0.9357;SizeDiff=-4;StartDistance=-41;EndDistance=-41;GTMatch=0;TruScore=97;MatchId=2386.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:39:1/1:1:12:3:19:1/1:7:366:7:380:1/1:0:19:1/1:1:163:.:731:.
chr18	35979758	HG3_Ill_SVrefine2DISCOVARDovetail_12326	AAAA	TAATAATAATTATTATTATAGGTTCATTCAGCAAACTAAGTGTGGCAAGACAAAATATATAATTACCAAAATGACCATAGTTTAACATTAGATAAATAACCAATGTTATTCACTACATTGATAGATTATGGGAGAAAAATAAAACAGCTACCTC	20	PASS	ClusterIDs=HG3_Ill_Spiral_17660:HG4_PB_SVrefine2PBcRDovetail_8659:HG3_PB_HySA_26059:HG4_PB_HySA_25183:HG3_PB_pbsv_17005:HG4_PB_SVrefine2Falcon1Dovetail_10721:HG4_Ill_manta_3933:HG4_Ill_SVrefine2DISCOVARDovetail_12093:HG3_PB_SVrefine2Falcon1Dovetail_10715:HG3_Ill_manta_3794:HG3_Ill_SVrefine2DISCOVARDovetail_12326:HG2_PB_assemblyticsfalcon_11478:HG2_PB_SVrefine2Falcon2Bionano_8542:HG2_PB_SVrefine2Falcon1plusDovetail_5151:HG2_Ill_manta_4640:HG2_Ill_SVrefine2DISCOVARplusDovetail_5531:HG2_10X_SVrefine210Xhap12_12031:HG2_PB_pbsv_17335:HG4_Ill_MetaSV_2181:HG3_Ill_MetaSV_2262:HG2_Ill_MetaSV_2120:HG2_PB_SVrefine2PBcRplusDovetail_4719:HG2_PB_assemblyticsPBcR_11097:HG4_PB_pbsv_17228:HG4_Ill_svaba_21293:HG4_Ill_250bpfermikitraw_22451:HG4_Ill_150bpfermikitraw_21611:HG3_Ill_svaba_21554:HG2_Ill_svaba_21350;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12031:HG2_Ill_SVrefine2DISCOVARplusDovetail_5531:HG2_Ill_manta_4640:HG2_PB_SVrefine2Falcon1plusDovetail_5151:HG2_PB_SVrefine2Falcon2Bionano_8542:HG2_PB_assemblyticsfalcon_11478:HG3_Ill_SVrefine2DISCOVARDovetail_12326:HG3_Ill_manta_3794:HG3_PB_SVrefine2Falcon1Dovetail_10715:HG4_Ill_SVrefine2DISCOVARDovetail_12093:HG4_Ill_manta_3933:HG4_PB_SVrefine2Falcon1Dovetail_10721:HG4_PB_SVrefine2PBcRDovetail_8659;NumExactMatchSVs=13;ClusterMaxShiftDist=0.173611;ClusterMaxSizeDiff=0.145329;ClusterMaxEditDist=0.284722;PBcalls=13;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=150;DistBack=-3;DistForward=-2;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=18:35979762-35979757;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9867;PctRecOverlap=0.9675;SizeDiff=2;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:23:0|1:24:4:0:17:0|1:16:0:0:22:0/1:4:11:./.:.:.:.:.:.
chr18	36512532	HG2_PB_SVrefine2Falcon2Bionano_8544	C	CAAAAGCAAATTTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCTGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2263:HG2_PB_assemblyticsfalcon_11482:HG2_PB_pbsv_17337:HG3_PB_pbsv_17009:HG3_PB_HySA_26066:HG4_Ill_MetaSV_2182:HG2_PB_SVrefine2PBcRplusDovetail_4721:HG2_PB_assemblyticsPBcR_11101:HG2_PB_SVrefine2Falcon2Bionano_8544:HG2_PB_SVrefine2Falcon1plusDovetail_5153:HG2_Ill_MetaSV_2121:HG3_Ill_GATKHCSBGrefine_11272:HG3_PB_SVrefine2PBcRDovetail_8412:HG2_Ill_breakscan11_4774:HG4_PB_pbsv_17232:HG4_PB_HySA_25190:HG2_PB_HySA_31520;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_2121:HG2_PB_SVrefine2Falcon1plusDovetail_5153:HG2_PB_SVrefine2Falcon2Bionano_8544:HG4_Ill_MetaSV_2182;NumExactMatchSVs=4;ClusterMaxShiftDist=0.315254;ClusterMaxSizeDiff=0.315254;ClusterMaxEditDist=0.345763;PBcalls=12;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=318;DistBack=54885;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=18:36512533-36512546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:55:./.:11:34:8:7:./.:12:0:0:2:0/1:32:11:./.:3:28:.:.:.
chr18	37057222	HG2_Ill_250bpfermikitraw_22831	A	AATATATATATTAATATATATAAATATATAAATATATATAAATATATAAATATATATAAATATATAAAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5537:HG2_PB_PB10Xdip_14137:HG4_Ill_GATKHC_27321:HG4_PB_pbsv_17236:HG4_Ill_GATKHCSBGrefine_11720:HG4_Ill_GATKHC_27320:HG4_Ill_250bpfermikitraw_22464:HG3_Ill_Krunchall_22753:HG3_Ill_GATKHC_27235:HG2_Ill_Krunchall_23162:HG2_Ill_GATKHC_27374:HG2_Ill_GATKHCSBGrefine_11363:HG2_Ill_250bpfermikitraw_22831:HG3_PB_pbsv_17012:HG4_PB_SVrefine2PBcRDovetail_8661:HG4_Ill_SVrefine2DISCOVARDovetail_12097:HG3_Ill_SVrefine2DISCOVARDovetail_12330:HG2_PB_SVrefine2PBcRplusDovetail_4723:HG2_PB_SVrefine2PB10Xhap12_12588:HG2_PB_SVrefine2Falcon2Bionano_8546;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22831:HG2_Ill_GATKHCSBGrefine_11363:HG2_Ill_GATKHC_27374:HG2_Ill_Krunchall_23162:HG3_Ill_GATKHC_27235:HG3_Ill_Krunchall_22753:HG4_Ill_250bpfermikitraw_22464:HG4_Ill_GATKHC_27320;NumExactMatchSVs=8;ClusterMaxShiftDist=0.184615;ClusterMaxSizeDiff=0.184615;ClusterMaxEditDist=0.382353;PBcalls=7;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=68;DistBack=57;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=179;REFWIDENED=18:37057147-37057325;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:47:1/1:4:19:3:15:./.:1:7:0:2:1/1:0:35:./.:.:.:.:.:.
chr18	37580376	HG3_Ill_GATKHC_27248	T	TATTTTATAGATCATTTGTTGTATTTTATGTAGATATATTATTTTTGATTTGACAGATTTTTTCCTTTTAAATTCTTATAGTA	20	PASS	ClusterIDs=HG4_PB_pbsv_17241:HG2_PB_assemblyticsfalcon_11493:HG3_PB_pbsv_17017:HG3_PB_SVrefine2Falcon1Dovetail_10719:HG4_PB_SVrefine2Falcon1Dovetail_10725:HG4_Ill_svaba_21305:HG4_Ill_manta_3938:HG4_Ill_Krunchall_23495:HG4_Ill_GATKHC_27332:HG4_Ill_GATKHCSBGrefine_11724:HG4_Ill_Cortex_1516:HG4_Ill_250bpfermikitraw_22474:HG4_Ill_150bpfermikitraw_21626:HG3_PB_SVrefine2PBcRDovetail_8415:HG3_Ill_svaba_21568:HG3_Ill_manta_3797:HG3_Ill_Spiral_17673:HG3_Ill_SVrefine2DISCOVARDovetail_12333:HG3_Ill_Krunchall_22764:HG3_Ill_GATKHC_27248:HG3_Ill_GATKHCSBGrefine_11277:HG3_Ill_Cortex_1565:HG3_Ill_250bpfermikitraw_22186:HG3_Ill_150bpfermikitraw_21559:HG2_PB_SVrefine2Falcon1plusDovetail_5157:HG2_Ill_svaba_21362:HG2_Ill_manta_4645:HG2_Ill_SpiralSDKrefine_7266:HG2_Ill_SVrefine2DISCOVARplusDovetail_5541:HG2_Ill_Krunchall_23169:HG2_Ill_GATKHC_27385:HG2_Ill_GATKHCSBGrefine_11367:HG2_Ill_Cortex_3680:HG2_Ill_250bpfermikitraw_22840:HG2_Ill_150bpfermikitraw_21535:HG2_10X_SVrefine210Xhap12_12036:HG2_Ill_breakscan11_4775:HG2_PB_HySA_31530;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12036:HG2_Ill_150bpfermikitraw_21535:HG2_Ill_250bpfermikitraw_22840:HG2_Ill_Cortex_3680:HG2_Ill_GATKHCSBGrefine_11367:HG2_Ill_GATKHC_27385:HG2_Ill_Krunchall_23169:HG2_Ill_SVrefine2DISCOVARplusDovetail_5541:HG2_Ill_SpiralSDKrefine_7266:HG2_Ill_manta_4645:HG2_Ill_svaba_21362:HG2_PB_SVrefine2Falcon1plusDovetail_5157:HG3_Ill_150bpfermikitraw_21559:HG3_Ill_250bpfermikitraw_22186:HG3_Ill_Cortex_1565:HG3_Ill_GATKHCSBGrefine_11277:HG3_Ill_GATKHC_27248:HG3_Ill_Krunchall_22764:HG3_Ill_SVrefine2DISCOVARDovetail_12333:HG3_Ill_Spiral_17673:HG3_Ill_manta_3797:HG3_Ill_svaba_21568:HG3_PB_SVrefine2PBcRDovetail_8415:HG4_Ill_150bpfermikitraw_21626:HG4_Ill_250bpfermikitraw_22474:HG4_Ill_Cortex_1516:HG4_Ill_GATKHCSBGrefine_11724:HG4_Ill_GATKHC_27332:HG4_Ill_Krunchall_23495:HG4_Ill_manta_3938:HG4_Ill_svaba_21305:HG4_PB_SVrefine2Falcon1Dovetail_10725;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0958084;ClusterMaxSizeDiff=0.0958084;ClusterMaxEditDist=0.240964;PBcalls=8;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=82;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=18:37580377-37580379;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2390.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:34:0|1:25:8:6:22:1|0:1:36:32:0:0/1:28:27:./.:.:.:.:.:.
chr18	38178008	HG2_Ill_GATKHCSBGrefine_11368	G	GGTTCAGATAATTAGAAAATTGAAACAAACATCCAAATATCTAATTTATATATACACATATGTATTGCATATATATATTGCATATTTATATGTATTGCACATACAATATATGCAATACATATGTGTATATATAAATTAGATATTTGGATGTTTGTTTCAATTTTCTAATTATCTGAACCTTTATCTCCTAAAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10720:HG4_PB_pbsv_17243:HG2_Ill_breakscan11_4776:HG3_PB_pbsv_17018:HG4_Ill_manta_3939:HG2_PB_pbsv_17346:HG4_Ill_MetaSV_2185:HG4_Ill_GATKHCSBGrefine_11726:HG3_Ill_manta_3798:HG3_Ill_Spiral_17677:HG3_Ill_MetaSV_2266:HG3_Ill_GATKHCSBGrefine_11279:HG2_Ill_manta_4646:HG2_Ill_MetaSV_2123:HG2_Ill_GATKHCSBGrefine_11368:HG2_Ill_250bpfermikitraw_22844:HG2_Ill_150bpfermikitraw_21540:HG2_PB_PB10Xdip_14138:HG2_PB_assemblyticsfalcon_11497:HG2_PB_assemblyticsPBcR_11116:HG3_PB_assemblyticsfalcon_11473:HG4_PB_assemblyticsfalcon_11296:HG4_PB_SVrefine2PBcRDovetail_8664:HG4_PB_SVrefine2Falcon1Dovetail_10726:HG4_Ill_SVrefine2DISCOVARDovetail_12104:HG3_PB_SVrefine2PBcRDovetail_8416:HG3_Ill_SVrefine2DISCOVARDovetail_12336:HG2_PB_SVrefine2PBcRplusDovetail_4726:HG2_PB_SVrefine2PB10Xhap12_12591:HG2_PB_SVrefine2Falcon2Bionano_8550:HG2_PB_SVrefine2Falcon1plusDovetail_5158:HG2_Ill_SVrefine2DISCOVARplusDovetail_5544;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21540:HG2_Ill_250bpfermikitraw_22844:HG2_Ill_GATKHCSBGrefine_11368:HG2_Ill_MetaSV_2123:HG2_Ill_manta_4646:HG3_Ill_GATKHCSBGrefine_11279:HG3_Ill_MetaSV_2266:HG3_Ill_Spiral_17677:HG3_Ill_manta_3798:HG4_Ill_GATKHCSBGrefine_11726:HG4_Ill_MetaSV_2185:HG4_Ill_manta_3939;NumExactMatchSVs=12;ClusterMaxShiftDist=0.128205;ClusterMaxSizeDiff=0.128205;ClusterMaxEditDist=0.330749;PBcalls=16;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=192;DistBack=6517;DistForward=14871;DistMin=6517;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=8;REFWIDENED=18:38178004-38178011;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2391.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:1/1:1:25:0:30:./.:0:28:1:19:1/1:0:43:./.:.:.:.:.:.
chr18	38348154	HG4_Ill_GATKHCSBGrefine_11727	T	TAAGAGAGCAGTGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_14139:HG2_PB_HySA_31536:HG2_PB_pbsv_17347:HG3_PB_pbsv_17019:HG4_Ill_MetaSV_2187:HG4_Ill_GATKHCSBGrefine_11727:HG2_Ill_MetaSV_2124:HG3_Ill_MetaSV_2267:HG3_Ill_GATKHCSBGrefine_11280:HG2_Ill_breakscan11_4777:HG2_PB_assemblyticsfalcon_11498:HG2_PB_SVrefine2Falcon1plusDovetail_5159:HG3_PB_SVrefine2Falcon1Dovetail_10721:HG4_PB_SVrefine2Falcon1Dovetail_10728:HG2_PB_SVrefine2Falcon2Bionano_8551:HG2_PB_SVrefine2PB10Xhap12_12592;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_2124:HG4_Ill_GATKHCSBGrefine_11727:HG4_Ill_MetaSV_2187;NumExactMatchSVs=3;ClusterMaxShiftDist=0.170772;ClusterMaxSizeDiff=0.167488;ClusterMaxEditDist=0.233108;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=-14;DistForward=13;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=18:38348151-38348168;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:38:1|0:2:17:22:7:0|1:39:0:0:7:0/1:19:10:0/1:8:19:.:.:.
chr18	38563850	HG2_PB_assemblyticsPBcR_11123	T	TCCTCCTCCTCCACCTTCTCCTCCTCCTCCTTCTCCACCTTCTCCTCCTCTTCCA	20	PASS	ClusterIDs=HG4_Ill_150bpfermikitraw_21636:HG2_PB_pbsv_17349:HG2_PB_HySA_31543:HG4_PB_HySA_25208:HG4_PB_pbsv_17246:HG4_Ill_scalpel_15741:HG3_Ill_GATKHC_27264:HG2_PB_assemblyticsPBcR_11123:HG2_Ill_GATKHC_27397:HG2_PB_PB10Xdip_14141;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHC_27397:HG2_PB_assemblyticsPBcR_11123:HG3_Ill_GATKHC_27264;NumExactMatchSVs=3;ClusterMaxShiftDist=0.169811;ClusterMaxSizeDiff=0.150943;ClusterMaxEditDist=0.306306;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=22;DistForward=47;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=146;REFWIDENED=18:38563789-38563934;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2393.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:10:43:1/1:7:24:3:11:./.:6:13:14:5:0/1:6:14:./.:.:.:.:.:.
chr18	38638662	HG2_PB_SVrefine2Falcon1plusDovetail_5161	T	TTTTTTCCTCAAATCTTTGCATCTCATTCCACTGTTACTCTCTTCTTTGCCTTTTACTGGGATTCTTGTCATAGCTTTATTA	20	PASS	ClusterIDs=HG4_PB_HySA_25210:HG3_PB_pbsv_17022:HG2_PB_HySA_31545:HG2_PB_PB10Xdip_14142:HG2_PB_pbsv_17350:HG3_PB_HySA_26090:HG4_PB_SVrefine2PBcRDovetail_8667:HG4_PB_SVrefine2Falcon1Dovetail_10730:HG4_Ill_SVrefine2DISCOVARDovetail_12107:HG4_Ill_Krunchall_23507:HG4_Ill_250bpfermikitraw_22485:HG4_Ill_150bpfermikitraw_21638:HG3_PB_SVrefine2PBcRDovetail_8418:HG3_PB_SVrefine2Falcon1Dovetail_10723:HG3_Ill_SVrefine2DISCOVARDovetail_12339:HG3_Ill_GATKHC_27266:HG3_Ill_GATKHCSBGrefine_11282:HG3_Ill_250bpfermikitraw_22200:HG2_PB_SVrefine2PB10Xhap12_12595:HG2_PB_SVrefine2Falcon1plusDovetail_5161:HG2_Ill_SVrefine2DISCOVARplusDovetail_5548:HG2_Ill_GATKHC_27399:HG2_Ill_GATKHCSBGrefine_11370:HG2_Ill_250bpfermikitraw_22850:HG2_10X_SVrefine210Xhap12_12038;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12038:HG2_Ill_250bpfermikitraw_22850:HG2_Ill_GATKHCSBGrefine_11370:HG2_Ill_GATKHC_27399:HG2_Ill_SVrefine2DISCOVARplusDovetail_5548:HG2_PB_SVrefine2Falcon1plusDovetail_5161:HG2_PB_SVrefine2PB10Xhap12_12595:HG3_Ill_250bpfermikitraw_22200:HG3_Ill_GATKHCSBGrefine_11282:HG3_Ill_GATKHC_27266:HG3_Ill_SVrefine2DISCOVARDovetail_12339:HG3_PB_SVrefine2Falcon1Dovetail_10723:HG3_PB_SVrefine2PBcRDovetail_8418:HG4_Ill_150bpfermikitraw_21638:HG4_Ill_250bpfermikitraw_22485:HG4_Ill_Krunchall_23507:HG4_Ill_SVrefine2DISCOVARDovetail_12107:HG4_PB_SVrefine2Falcon1Dovetail_10730:HG4_PB_SVrefine2PBcRDovetail_8667;NumExactMatchSVs=19;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.0848485;ClusterMaxEditDist=0.272189;PBcalls=12;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=81;DistBack=3153;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=90;REFWIDENED=18:38638663-38638752;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2394.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:0|1:22:3:4:29:./.:11:2:1:14:0/1:12:17:./.:.:.:.:.:.
chr18	39853973	HG2_PB_SVrefine2Falcon2Bionano_8560	G	GTATACATATATATATATATATATATATATATATATATATATATATATATATATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_17255:HG4_PB_SVrefine2PBcRDovetail_8673:HG2_PB_pbsv_17357:HG2_PB_HySA_31556:HG4_PB_HySA_25219:HG4_Ill_GATKHC_27359:HG4_Ill_GATKHCSBGrefine_11740:HG4_Ill_FB_14556:HG4_Ill_150bpfermikitraw_21649:HG2_Ill_GATKHC_27414:HG2_Ill_GATKHCSBGrefine_11382:HG4_PB_SVrefine2Falcon1Dovetail_10735:HG2_PB_SVrefine2Falcon2Bionano_8560:HG2_PB_SVrefine2Falcon1plusDovetail_5168:HG4_Ill_SVrefine2DISCOVARDovetail_12115;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5168:HG2_PB_SVrefine2Falcon2Bionano_8560:HG4_PB_SVrefine2Falcon1Dovetail_10735:HG4_PB_SVrefine2PBcRDovetail_8673;NumExactMatchSVs=4;ClusterMaxShiftDist=0.103448;ClusterMaxSizeDiff=0.103448;ClusterMaxEditDist=0.266667;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=148690;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=18:39853974-39853996;PctSeqSimilarity=0.973;PctSizeSimilarity=0.9643;PctRecOverlap=0.6667;SizeDiff=2;StartDistance=-18;EndDistance=-18;GTMatch=0;TruScore=86;MatchId=2396.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:23:0|1:24:1:2:22:0|1:21:0:0:5:0/1:25:5:./.:.:.:.:.:.
chr18	39919809	HG3_Ill_manta_3801	T	TTGGACAGTGATTTTGAGGCTAAGTTAGGATTCTTTTCTTTTTTCTTTTTTTAAGGCAGTGTC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_22867:HG2_PB_assemblyticsfalcon_11518:HG3_PB_assemblyticsfalcon_11495:HG4_PB_assemblyticsfalcon_11319:HG3_PB_pbsv_17031:HG2_PB_HySA_31558:HG2_PB_pbsv_17358:HG3_PB_HySA_26104:HG3_Ill_svaba_21585:HG3_Ill_manta_3801:HG3_Ill_Krunchall_22788:HG3_Ill_GATKHC_27283:HG3_Ill_GATKHCSBGrefine_11292:HG3_Ill_250bpfermikitraw_22214:HG2_Ill_svaba_21378:HG2_Ill_Krunchall_23195:HG2_Ill_GATKHC_27416:HG2_Ill_GATKHCSBGrefine_11383;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22867:HG3_Ill_svaba_21585:HG3_Ill_manta_3801:HG3_Ill_Krunchall_22788:HG3_Ill_GATKHC_27283:HG3_Ill_GATKHCSBGrefine_11292:HG3_Ill_250bpfermikitraw_22214:HG2_Ill_svaba_21378:HG2_Ill_Krunchall_23195:HG2_Ill_GATKHC_27416:HG2_Ill_GATKHCSBGrefine_11383;NumExactMatchSVs=11;ClusterMaxShiftDist=0.108527;ClusterMaxSizeDiff=0.108527;ClusterMaxEditDist=0.225564;PBcalls=7;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=61901;DistForward=2068;DistMin=2068;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=63;REFWIDENED=18:39919810-39919872;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2397.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:31:0|1:25:0:2:28:./.:2:13:5:0:0/1:22:20:./.:.:.:.:.:.
chr18	39954160	HG3_Ill_MetaSV_2270	G	GCTTGTTAGATTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2127:HG4_PB_assemblyticsfalcon_11320:HG3_PB_assemblyticsfalcon_11496:HG2_PB_pbsv_17359:HG4_PB_SVrefine2Falcon1Dovetail_10736:HG2_PB_HySA_31559:HG3_PB_SVrefine2Falcon1Dovetail_10731:HG3_Ill_MetaSV_2270:HG3_Ill_GATKHCSBGrefine_11293:HG2_PB_SVrefine2Falcon2Bionano_8561;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_MetaSV_2127:HG3_Ill_MetaSV_2270:HG3_Ill_GATKHCSBGrefine_11293:HG2_PB_SVrefine2Falcon2Bionano_8561;NumExactMatchSVs=4;ClusterMaxShiftDist=0.124334;ClusterMaxSizeDiff=0.124334;ClusterMaxEditDist=0.209591;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=293;DistBack=6108;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=18:39954161-39954174;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2398.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:23:./.:4:11:14:4:1|0:0:18:21:0:0/1:23:14:./.:.:.:.:.:.
chr18	41942000	HG2_PB_PB10Xdip_14150	A	TATAATATTTATATTTATATAATATATAAATAAATATAAATATAATATTTATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATAATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATTTATATAATATATAAATAAATATAAATATATTTATATTTATATAATATATAAATAAATATAAA	10	PASS	ClusterIDs=HG2_PB_pbsv_17366:HG2_PB_PB10Xdip_14150:HG4_PB_pbsv_17265:HG3_PB_pbsv_17039;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_14150;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0365985;ClusterMaxSizeDiff=0.0192926;ClusterMaxEditDist=0.2589;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=463;DistBack=24;DistForward=15692;DistMin=24;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1870;REFWIDENED=18:41940296-41942165;PctSeqSimilarity=0.998;PctSizeSimilarity=0.9957;PctRecOverlap=0.9441;SizeDiff=-2;StartDistance=25;EndDistance=25;GTMatch=0;TruScore=97;MatchId=2399.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:3:17:1:10:./.:0:0:0:5:./.:0:3:1/1:2:22:.:.:.
chr18	43225584	HG2_Ill_150bpfermikitraw_21578	A	ATATATACATATATATATATATATATATATACATATATATATATATATATT	20	PASS	ClusterIDs=HG4_PB_pbsv_17268:HG4_Ill_svaba_21340:HG2_PB_pbsv_17372:HG4_Ill_scalpel_15765:HG4_Ill_Krunchall_23545:HG4_Ill_GATKHC_27385:HG4_Ill_GATKHCSBGrefine_11754:HG4_Ill_250bpfermikitraw_22521:HG4_Ill_150bpfermikitraw_21673:HG3_Ill_svaba_21607:HG3_Ill_scalpel_16527:HG3_Ill_Spiral_17713:HG3_Ill_Krunchall_22817:HG3_Ill_GATKHC_27314:HG3_Ill_GATKHCSBGrefine_11307:HG3_Ill_250bpfermikitraw_22242:HG3_Ill_150bpfermikitraw_21609:HG2_PB_assemblyticsfalcon_11543:HG2_PB_assemblyticsPBcR_11164:HG2_Ill_svaba_21398:HG2_Ill_scalpel_16179:HG2_Ill_Krunchall_23217:HG2_Ill_GATKHC_27443:HG2_Ill_GATKHCSBGrefine_11392:HG2_Ill_FB_14729:HG2_Ill_250bpfermikitraw_22886:HG2_Ill_150bpfermikitraw_21578:HG3_PB_assemblyticsfalcon_11520:HG2_PB_PB10Xdip_14153:HG3_PB_pbsv_17043:HG4_Ill_svaba_21339:HG3_Ill_svaba_21606:HG2_Ill_svaba_21397:HG2_PB_HySA_31583;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21578:HG2_Ill_250bpfermikitraw_22886:HG2_Ill_FB_14729:HG2_Ill_GATKHCSBGrefine_11392:HG2_Ill_GATKHC_27443:HG2_Ill_Krunchall_23217:HG2_Ill_scalpel_16179:HG2_Ill_svaba_21398:HG2_PB_assemblyticsPBcR_11164:HG2_PB_assemblyticsfalcon_11543:HG3_Ill_150bpfermikitraw_21609:HG3_Ill_250bpfermikitraw_22242:HG3_Ill_GATKHCSBGrefine_11307:HG3_Ill_GATKHC_27314:HG3_Ill_Krunchall_22817:HG3_Ill_Spiral_17713:HG3_Ill_scalpel_16527:HG3_Ill_svaba_21607:HG4_Ill_150bpfermikitraw_21673:HG4_Ill_250bpfermikitraw_22521:HG4_Ill_GATKHCSBGrefine_11754:HG4_Ill_GATKHC_27385:HG4_Ill_Krunchall_23545:HG4_Ill_scalpel_15765:HG4_Ill_svaba_21340;NumExactMatchSVs=25;ClusterMaxShiftDist=0.137255;ClusterMaxSizeDiff=0.135922;ClusterMaxEditDist=0.256881;PBcalls=8;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=68457;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=31;REFWIDENED=18:43225578-43225608;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2400.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:71:1/1:0:29:1:25:1/1:0:14:1:11:1/1:1:57:./.:.:.:.:.:.
chr18	45126913	HG2_PB_SVrefine2PB10Xhap12_12626	A	AACCACCATCACCACCACCCCATTACTATCACCAAACCACTACCACCACCACCACAATCACCACTATCATCACCACCACCACTACCATCATCACCACCACTACAACCACCACCACCACCATCACCACCACCACCCCCTCAGCACCACCCTATCACCAACACCATTACCACCACCACCATCACAACCACCTTCCCACCACTACAACCACCACCACAACCACCACCACCACTATTACAACAATTACCATCACCATCACCACCACCACCACCCCCTCGCCACCACCATCACCGTCACTACTGCCACCACCACCACCAGCACCGCCACCCTCACCACCACCACCACTGTCACCACCACTACCATCACAACTACTCCACCACCACCACTACCATCACCACCACAATTACCACCACCACCATCACCATCAGCACCACCCTCATCATCACCACCACCATTACCACCACCATCACCATTACCACCGTCACCACAAACACCCTCACTACCACCATCACCATCACCACCACTATCACCATCACCACCACAAACACCCTCACCACCACCATCACCATCACCACCACCACCCTCACCACTACCATCACCACTGCCACCCTCACCATCACCACCACCACCACCATCACCATCACCACTGCCATGACCACCACCATCATCATCACTGTCACCACCATCACCACCACCCTCACC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10745:HG2_PB_HySA_31606:HG4_PB_pbsv_17279:HG2_Ill_breakscan11_4778:HG3_PB_pbsv_17051:HG2_PB_SVrefine2Falcon1plusDovetail_5184:HG2_PB_pbsv_17382:HG2_Ill_MetaSV_2136:HG3_PB_SVrefine2PBcRDovetail_8435:HG2_PB_SVrefine2PBcRplusDovetail_4750:HG2_PB_SVrefine2PB10Xhap12_12626:HG2_PB_SVrefine2Falcon2Bionano_8575:HG4_PB_SVrefine2Falcon1Dovetail_10751:HG4_Ill_MetaSV_2198:HG4_PB_SVrefine2PBcRDovetail_8688:HG3_Ill_MetaSV_2280:HG2_PB_PB10Xdip_14177:HG4_PB_HySA_25260:HG2_PB_HySA_31605;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8575:HG2_PB_SVrefine2PB10Xhap12_12626:HG2_PB_SVrefine2PBcRplusDovetail_4750;NumExactMatchSVs=3;ClusterMaxShiftDist=0.168937;ClusterMaxSizeDiff=0.168937;ClusterMaxEditDist=0.257294;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=698;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=123;REFWIDENED=18:45126914-45127036;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9957;PctRecOverlap=0.9971;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:62:1/1:1:6:0:9:1/1:0:25:0:27:1/1:0:26:1/1:1:143:.:.:.
chr18	46198354	HG2_PB_SVrefine2PBcRplusDovetail_4754	A	AAATAAATAAATATATATATATATATATATATATATATATATATATATATATATATGTATGTATCTTCTCTTCCTCATGCTTTCTTTTCTGCAGCATATAGAACCTATTCCCAATAGCTGTTTTAAGTCCTTCTCTACTAATTCTGTCATCCATATAATCTCTGAGTCTATTTCTATTCATTGATTTTTCTCTTGGTTATGGGGCATACCTTTCTTTACATGCTTGGTAATTTGATGTTAAATGTCATATGTTAGAACCTTTACATTATTGGGTGCTATTTTTTTTGTATCACTTTAAATATTTTGGGTTTTGTTCTGGATCACAGTTAAGTTACATAAAAACAGTTTGATCCTTTCAAGACTTGCTTTTAGGCTTTGTTAGGGTGGGAAGACTTTAGTGTAGGGCAAATTTTGCTCCACTGCTGAATCAATACCCTTCTGAGATTGCCACCCAATGCTCTGTGTATTAGGAGGTGTTCCCCCCTGGCTGGAGAAACACAAACTATTTTCAGCCGTATGTGATCTCAGTGGATTGTTCTATCTATTCCTTGCCTCAGAAGTTTCCTTACACATGGACAAATTAATACTCAGCCAAAGACTTGAGAGGCTAAGATTTCTGGATTTATCTCTGTATGTTGGTCTCTCCTCTTTAGTACTCTGCCTTGCAAATCAAATTGTCTTGGACTCCGTGGATTTTGAACCCTGTCATCTTAGCTCATTGAGACCACTGGGCCCTGGACTGCCCTCCCTGTGTTGCAGACTGGAAACTTTCCAGGCAATGAACCAGGGCACACATAGAGGTCACCTCATTACAAAGAGAAATATGATGACTTTATCACGGAGAAACCTGGAAGGCCCCAACGTGACCAGGTGATCAAGGAAACATCATTAGTGATGGGATGGGTGGACACTATGTCCTTCCTTCCAAGAAAGCATAGCCTGAGTCTGGTTTTTGGAAATCAGTATAAGGACCACTCTCTATAACTGCTTGGACACAAAAGACAGGGAAAGACTGAGGAAGTCTTCCAGATTGTAGAAGACAGAAGAGGCAAATGACTAAATACAACTTGTGTTCCTTGCTGAAATCCTGAACCAGAAGGAAATGCTGACCTTGCTGGGACAGTTGGAGAATGTGATTAGGTCTGTGGGTGGGACAGTAGTGTTGCTTCGATGTCAGTTTCCTGACTTGGAGGCGGTGTTGGTCATGTGGGCGAGTGTGCTTGACTTTGAGAAATACACACTATGATGTTTGAGGGATATGGGCCTGGTGTCTGCAGCGTCTCCTCAAATGGTTTAGAAAGAGATTGATGATAATGGTTTGTAGACACAGAGGAAGAGAAAGGGCAAACATGCGGAGGTGTTAACAGTTGGGGAATCTGAGTGAGGAGGACGTGGATGTTCTTTGTACAGTTCTTGCACTTTCCTATAAATTTGACAGGAAAAAGAATCAATCAGTAGGGCCGAGGCTGTGATGTATAAGTCACAGGCAGAGTATCAGCTCATGAAACACCCTTTGGGCTGGATCTATATTAAATTATCACTGCTAATGGAAAGCCAGCCTTGACGCAAGAGAAAAAAGGGTAAGGTACTCGAAGTGACCACCTTATCACTCCATTTCTAAATGCCAAGAGCATTCATCATTGATAGAAGAAGTACATTTGAGAGACCCCGATCTAGGTGAGAAACCAGATGCCCCCTGCACTAGGCGGGGTGTTGACCACTCGGTACCCTTTGAGCCAGAAGCTTGGGAGTCATGGCTGGAAAAGTAACAGATCTGACGCTTTGTGTTGTTTGGTGACTGTTTCTTCACTCCTCTAGGGTACAAAATGGAGGACCTTTGGTTCCTGCTCAGACGAGAAAGGAGAGCTGGGCTGCTGGCTGGGTGGGAGGTTGGCGGTCAAGGGCTTGGTGTCTGGACCCAGGCATAGTCCCCATGGAATCCCAGCCCTGCCATTGACTAGCCCAGGAGTCTGGGGCTAGCTACTTACTCGCACTCTGCCTCAGTTTCCTCCTCTGTAAGATGAGGGAAATAACCATATCTACTTTATGGGGCGTTTGGGAAGATCAAGCACATTCCTTCACTTGAGGTGCTGAGGATGATGCCCAGCGCACAGTGGGTGCTGTGTTGGTCTCTGCTGTAATTATTCCCGGGACTCAACAATGCCAGTGAAGCCCCACCTTCTGAGGGTGGACCAGGCTATGGGGGCCCCCTCTGTTAAGAAGAGGAAGGAGGGGGTGATTTCCTGCTCCTACCCCCAGGTGAGTTGTTTCTTGGTGAAGAGGGCAATTCTGCTGGGCAAAAGCTCAGATGATGAACCTTGGCTCATAGGTTACCAAGGCCCTGGTTGATTCTTCTCCTATGCGGCCTGACAGGCAGTGGAGACAGATTGGACTAGAGGTCAGAAGAATCCACTTCTGGATGTCTGCCAGAGCCGTGTGTGTGACCTCTCCTCTGTGGGCCTCAGTTTACTCATCAGCATAATGACACAGTTGTATTAGATCAGAGGTTTGCAAACTGTGAAGCCCTCAGGATTCTCCTGGGTTGCCCCTGGGTGCTACTGGGGGGAATAGGGAGGCGGAAGCAGCCAGTTCTAGGGGCCCCCACTTGGGCCCACCCAGAACTGTTTGGCTGGTGCCTCTAAATCAGGATTCTAACGTGGTTTCATGTAAAGAAACAATCCTACTACTAAACAAACTTTGAACATCATCAGACCAAGGTCCTCTGAGGTTTCACATTCTAGAGTTTTCTTTTTTTTCTCAAGGGACGGTAAATCAGTGAGAATTCCGGGCTCTCCAGGGCCCACATGTGATGCTAAGCTCTTAGGGGCGGCTGGTAGTGGAGGCCTTCACCCACCGTCTCCACCGTCAGGCTGGAGCAGAAGGGCTTGGATATTCGTGCGCGCGCACACACACTCTTACACACCATCTATCACACACACGTACACACATACACACACCACACACATCAAACATACACATTACATATCATACACCTACACATACTCACTGCACATACCACACACCACACATGTACATACACACATATACACATCACACACATCCCTTCACACCCTACACACACATACACTACACATGCACACACATACATCACACACATATACACCCATATATACACAGCACACACACACACACACACACACACACCCCCACATGTTTCCATGACACACACTTTGGATGTGCTTTGCCCTCAGTGAACTATCAGCAGATGAATCTGAGGCCACGGTGCTGGAGCTCAGCTGCATGTCGGAACTGCCTGGGAAGTGCTGAAATCTACACTGTCTGCCCACTGTGTTCCTCATTTACTGTTGTGTAACAAATTGCTCAAAACTTACTGGCTTAAAACAACAAAGAGTTATGATCCACACACTTTCTGGGAGCAGCTTAGCTGGTGGTTCAGACTCAAGGTCTCTCATGAGTTTGCACTCAAGCTGATGACCAGGGATGCCGCCATCAGAAGGCACACCTGGGCTGGAAGACCCCCTCCTGTGTCTGAAGGCAGGAGGCTTCAGTTCCTCCCTGGCTGGGGGCAGGAAGCCTGGGTTCCTCCCTGGCTTCCTTGCCATGATATCTGCATAAGCTGCTTGAGTGCCCTCAGAATATGGCAGCTGTCTTTCCCCAAAGCAAGTGGTGACGGGGGGAGAGAGAAGACTCCATCGCAGAAGTCACACTCGTTTATAGCCTGATCTCAGAAGTGACAGAGCTTCACACTGCCATTTGCTGTATGTCATTTGCACAGACCAACCCTGGTACAATATGGGAAGGGCCTACACAGAGGTGTGGATCCCCAAAGGCAGGAATCATGGGGGGCTCCTGGAGGCTGGAGGACACCCTCACTGAATCACACCCAGGAATCCATTTCTTTCTTTTTTTCTTTTCTTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTTTTTTTGGAGTCTCTCTCTGGCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGATCATTGCAACCTCCACCTCCCAGGTACAAGCGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGCCACAGGTGCCCACCACCATGCCCAGCTAATTTTTCTATTTTTAGTAGAGATGGGGTTTCACCATCTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCACCTCAGCCTCCCAAAGTGTTGGGATTACAGGCATG	20	PASS	ClusterIDs=HG4_PB_HySA_25275:HG2_PB_pbsv_17389:HG4_PB_pbsv_17286:HG3_PB_pbsv_17058:HG2_Ill_breakscan11_4780:HG2_PB_PB10Xdip_14183:HG4_Ill_SVrefine2DISCOVARDovetail_12145:HG4_PB_SVrefine2Falcon1Dovetail_10757:HG4_PB_SVrefine2PBcRDovetail_8693:HG2_10X_SVrefine210Xhap12_12067:HG2_PB_SVrefine2Falcon1plusDovetail_5188:HG3_PB_SVrefine2Falcon1Dovetail_10748:HG2_PB_SVrefine2PBcRplusDovetail_4754:HG2_PB_SVrefine2PB10Xhap12_12630:HG2_Ill_SVrefine2DISCOVARplusDovetail_5579:HG2_PB_SVrefine2Falcon2Bionano_8579:HG3_Ill_SVrefine2DISCOVARDovetail_12378:HG3_PB_SVrefine2PBcRDovetail_8438;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_4754;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0398787;ClusterMaxSizeDiff=0.0391791;ClusterMaxEditDist=0.16313;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=4215;DistBack=7248;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=18:46198355-46198355;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9998;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2402.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:119:1/1:0:30:0:23:1/1:0:9:0:6:1/1:0:31:1/1:0:361:.:4090:.
chr18	46293246	HG2_10X_SVrefine210Xhap12_12069	T	TCTTCTCTCCCGCTGCCTCCATTTCTCTCTGTCCTCAGCTCCTTTTCCCATTTTC	20	PASS	ClusterIDs=HG3_PB_HySA_26172:HG4_Ill_svaba_21374:HG3_PB_pbsv_17060:HG4_Ill_scalpel_15795:HG4_PB_pbsv_17287:HG4_Ill_Krunchall_23574:HG4_Ill_GATKHC_27422:HG4_Ill_GATKHCSBGrefine_11765:HG4_Ill_250bpfermikitraw_22545:HG4_Ill_150bpfermikitraw_21700:HG3_Ill_svaba_21639:HG3_Ill_scalpel_16553:HG3_Ill_Krunchall_22847:HG3_Ill_GATKHC_27350:HG3_Ill_GATKHCSBGrefine_11320:HG3_Ill_250bpfermikitraw_22266:HG3_Ill_150bpfermikitraw_21634:HG2_Ill_svaba_21437:HG2_Ill_scalpel_16204:HG2_Ill_Krunchall_23252:HG2_Ill_GATKHC_27477:HG2_Ill_GATKHCSBGrefine_11404:HG2_Ill_250bpfermikitraw_22914:HG2_Ill_150bpfermikitraw_21610:HG2_10X_SVrefine210Xhap12_12069:HG4_PB_HySA_25276:HG2_PB_HySA_31625;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12069:HG2_Ill_150bpfermikitraw_21610:HG2_Ill_250bpfermikitraw_22914:HG2_Ill_GATKHCSBGrefine_11404:HG2_Ill_GATKHC_27477:HG2_Ill_Krunchall_23252:HG2_Ill_scalpel_16204:HG2_Ill_svaba_21437:HG3_Ill_150bpfermikitraw_21634:HG3_Ill_250bpfermikitraw_22266:HG3_Ill_GATKHCSBGrefine_11320:HG3_Ill_GATKHC_27350:HG3_Ill_Krunchall_22847:HG3_Ill_scalpel_16553:HG3_Ill_svaba_21639:HG4_Ill_150bpfermikitraw_21700:HG4_Ill_250bpfermikitraw_22545:HG4_Ill_GATKHCSBGrefine_11765:HG4_Ill_GATKHC_27422:HG4_Ill_Krunchall_23574:HG4_Ill_scalpel_15795:HG4_Ill_svaba_21374;NumExactMatchSVs=22;ClusterMaxShiftDist=0.146789;ClusterMaxSizeDiff=0.12844;ClusterMaxEditDist=0.238532;PBcalls=5;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=54;DistBack=36214;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=57;REFWIDENED=18:46293247-46293303;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2403.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:27:0|1:21:2:2:25:0|1:12:0:1:17:0/1:25:30:./.:.:.:.:.:.
chr18	46523833	HG2_Ill_svaba_21440	T	TAGAAAAGGGACGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_25285:HG2_PB_pbsv_17392:HG4_Ill_svaba_21377:HG4_PB_pbsv_17290:HG2_Ill_svaba_21440;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_svaba_21440:HG4_Ill_svaba_21377;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0743802;ClusterMaxSizeDiff=0.0661157;ClusterMaxEditDist=0.221311;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=116;DistBack=11621;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=18:46523834-46523846;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:28:./.:10:15:12:5:1|0:0:13:13:0:0/1:32:8:./.:.:.:.:.:.
chr18	46593457	HG2_PB_SVrefine2PB10Xhap12_12631	C	CTATGGAAGTTCAGTAGAGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGCACTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGATGTGAGCACTATGCAGGTTCAGTAGAGGAAGGAGTGGGGTGACATGTTATGGAGGTTCAGTAGGGGAAGGAATGGGGTGATGTGAGCACTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGATGTGTTATGGAGATTCAGTAGGGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGATGATGTGAGGGTTATGGAGGTTTAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGATGTTATTGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGCACTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTCATAGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAACACTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGATTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGCACTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGGTGATGTGAGTGTTATGGAGATTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTATTGTTATGGAGGTTCAGTAGGGGAAGGGGTAGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATATGTTGTGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10759:HG2_PB_pbsv_17393:HG3_PB_pbsv_17063:HG4_PB_HySA_25287:HG4_PB_pbsv_17291:HG2_PB_HySA_31631:HG2_PB_PB10Xdip_14184:HG3_PB_HySA_26179:HG2_PB_SVrefine2Falcon1plusDovetail_5189:HG4_PB_SVrefine2PBcRDovetail_8695:HG3_PB_SVrefine2PBcRDovetail_8440:HG2_PB_SVrefine2PBcRplusDovetail_4755:HG2_PB_SVrefine2PB10Xhap12_12631:HG2_PB_SVrefine2Falcon2Bionano_8580:HG3_PB_SVrefine2Falcon1Dovetail_10750;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12631:HG2_PB_SVrefine2PBcRplusDovetail_4755:HG3_PB_SVrefine2PBcRDovetail_8440;NumExactMatchSVs=3;ClusterMaxShiftDist=0.125675;ClusterMaxSizeDiff=0.124693;ClusterMaxEditDist=0.232303;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1023;DistBack=6366;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=424;REFWIDENED=18:46593458-46593881;PctSeqSimilarity=0.9844;PctSizeSimilarity=0.998;PctRecOverlap=0.6862;SizeDiff=2;StartDistance=-320;EndDistance=-320;GTMatch=0;TruScore=88;MatchId=2405.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:128:1/1:1:14:1:22:1/1:7:217:3:291:./.:0:0:./.:12:133:.:.:.
chr18	46729330	HG2_PB_SVrefine2Falcon1plusDovetail_5190	C	CAGCCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCGTCCGGGAGGGAGGTTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGGTCAGCCCTCCGCCCAGCCAACCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGAGGAGGTGGGGGGTCAGCCCCGCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCGGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGTGGGGGTGTCGGCCCCCGTCCGGCCAGCCGCTCCGTCCGGGAGGGAGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGAGAGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5190:HG2_PB_PB10Xdip_14185:HG2_PB_pbsv_17394:HG3_PB_pbsv_17064:HG4_PB_pbsv_17292:HG4_PB_SVrefine2Falcon1Dovetail_10760:HG3_PB_SVrefine2Falcon1Dovetail_10751:HG2_PB_SVrefine2Falcon2Bionano_8581:HG2_PB_SVrefine2PB10Xhap12_12632:HG2_PB_SVrefine2PBcRplusDovetail_4756;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5190;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0362923;ClusterMaxSizeDiff=0.0352941;ClusterMaxEditDist=0.212931;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1014;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=392;REFWIDENED=18:46729331-46729722;PctSeqSimilarity=0.9839;PctSizeSimilarity=0.9769;PctRecOverlap=0.8422;SizeDiff=-24;StartDistance=-152;EndDistance=-152;GTMatch=0;TruScore=93;MatchId=2406.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:./.:0:0:0:29:./.:0:0:0:1:./.:0:1:0/1:20:88:.:.:.
chr18	47105356	HG2_PB_SVrefine2PB10Xhap12_12634	T	TGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8699:HG2_PB_PB10Xdip_14187:HG2_PB_pbsv_17396:HG2_PB_SVrefine2PBcRplusDovetail_4758:HG4_PB_pbsv_17296:HG2_PB_SVrefine2PB10Xhap12_12634:HG2_PB_SVrefine2Falcon2Bionano_8583;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12634:HG2_PB_SVrefine2PBcRplusDovetail_4758;NumExactMatchSVs=2;ClusterMaxShiftDist=0.136364;ClusterMaxSizeDiff=0.136364;ClusterMaxEditDist=0.240437;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=83;DistBack=-83;DistForward=14;DistMin=-83;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=252;REFWIDENED=18:47105357-47105608;PctSeqSimilarity=0.9512;PctSizeSimilarity=0.9222;PctRecOverlap=0.7912;SizeDiff=-7;StartDistance=-15;EndDistance=-15;GTMatch=1;TruScore=88;MatchId=2407.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:6:25:1/1:4:14:1:9:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr18	47337300	HG2_PB_SVrefine2Falcon2Bionano_8586	T	TAACAAATAATCTGGGCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCGTCCCTCCCTCTCCGTCTCCGTCTCCGTCTCCCTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGTTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGACCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAACCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCCGGCCGCCCAGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCACCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCAGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGAGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGCGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCTGCCCCGTCCGCGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGACCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGCCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_14191:HG4_PB_pbsv_17299:HG2_PB_pbsv_17399:HG4_PB_HySA_25296:HG3_PB_pbsv_17070:HG2_PB_assemblyticsPBcR_11213:HG2_PB_assemblyticsfalcon_11580:HG2_PB_HySA_31642:HG4_PB_HySA_25295:HG4_PB_SVrefine2PBcRDovetail_8702:HG2_PB_SVrefine2PB10Xhap12_12637:HG2_PB_SVrefine2Falcon2Bionano_8586:HG2_PB_SVrefine2PBcRplusDovetail_4761:HG2_PB_SVrefine2Falcon1plusDovetail_5194:HG4_PB_SVrefine2Falcon1Dovetail_10767:HG3_PB_HySA_26189;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8586;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0382721;ClusterMaxSizeDiff=0.0378931;ClusterMaxEditDist=0.238042;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=2650;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=18:47337301-47337315;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2408.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:108:./.:0:1:0:1:./.:0:2:0:3:1/1:0:19:1/1:6:488:.:2661:.
chr18	47569786	HG3_Ill_svaba_21652	T	TTTAAATATATTTAAATATATTAAATATTAAATATTTAAATATATTAAATATTAAATATTAAATATATTTAAATATATTAAATATTAAATA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_22932:HG4_PB_pbsv_17300:HG4_Ill_svaba_21387:HG2_PB_pbsv_17400:HG4_Ill_scalpel_15807:HG4_Ill_GATKHC_27442:HG4_Ill_GATKHCSBGrefine_11772:HG4_Ill_250bpfermikitraw_22562:HG3_Ill_svaba_21652:HG2_Ill_svaba_21449:HG2_Ill_scalpel_16216:HG2_Ill_GATKHC_27497:HG2_Ill_GATKHCSBGrefine_11412;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22932:HG4_Ill_svaba_21387:HG4_Ill_scalpel_15807:HG4_Ill_GATKHC_27442:HG4_Ill_GATKHCSBGrefine_11772:HG4_Ill_250bpfermikitraw_22562:HG3_Ill_svaba_21652:HG2_Ill_svaba_21449:HG2_Ill_scalpel_16216:HG2_Ill_GATKHC_27497:HG2_Ill_GATKHCSBGrefine_11412;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0546448;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.251366;PBcalls=2;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=90;DistBack=27;DistForward=28;DistMin=27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=45;REFWIDENED=18:47569785-47569832;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:44:0|1:37:7:2:33:./.:1:1:0:4:0/1:9:13:./.:.:.:.:.:.
chr18	47975614	HG2_10X_SVrefine210Xhap12_12074	T	TCTTGGCCTCATGGATTCCAAGGAATGGAATCTTGGGCCATGCAGTGAGTGTTATAGCTCTATTAGAAGCCATGGGTCACGGAAGAGAACTGTGAACCCAGTGACTAGTGTTCAGCTCAATTAGGATGAACCTGGGCACTTAGCCATGCAGGAACAATGGCAAGACTTTAGCCTGATCAGGAGCAGCAATGGGTGCCTTGCTGGATCAGGGGCACAGAGGACACCCTGCCGAATCCGAAGGGATGGAAGTCAGTGGCAGGTCTGCGGCGGCAGCAAACAGCAGTGGTGGACAGTGAACAAAAGCTCAGCTAGAGCCGAGCCATAGCAAACATGCACCAGAAGAGAGCGCAGTTGCAAGATTTAATAGAGCGAAAACAGAGCTCCCATACAAAGGGAGGGGACCCAAAGAGGGTAGCCATTGCTGGCTTGAATGCCTGGGTTTATATCCTGATCATTGTCCCGCCCACTGTGGTCTCAGGCGAAAGATGATTGGCTATTTTTTTACCTGCTGTTTTTGCCTGATTAGCATTTTAGTGAGCTCTCTTTATTACCTGGTTGGCCGGTGTGAGCTAAGTTGCAAGCCCCATGTTTAAAGGTGGATGCGGTCACCTTCCCAGCTAGGCTTAGGGATTCTTAGTTGGCCTAGGAAATCCAGCTAGTCCTGTCTCTCAGTCCCCCCTCTCAACAGGAAAACCCAAGTGCTGTTGGGGAGGTTGGCTGACAACTGCTCTAACTGCTTCCTGCTGAATTGGGGTGTAGTAGGGGTTGTGCAGTTGAGATTTCCTTGGGAGGGGTGCCTTTGATGTCATTAACATTGGAGCATGGGCTAGCAGGCTGGTCCAGGGGTCCACGGTAGATTTTAGTCATGGACTGCATCTGGGGCTCCATTTGAAGAATGATTTGTAGCTTTACACCTTCAATTCTGGAAGAGACAAACTTAACAAGGAGGTTAAAGATACAGGGTCCAAAGAGGAGTAGCAATATTATAGCTGCTAGAGGTCCTAAGAAGGGGAGAATCCAGGGCATCCATTGGCTGAGGAGGCCCCAGGGTCCAGTGTTTTGAAGCTCCTCTGCTCTACATTGTATTTGATCTTGAATTTAACTTTCTCGGTGATGATTCCGGATTGATTAACATAATAACAGCATTCTTCCCCTAAAAATAAACAGGTTCCCTCTCTTTTGGTGGTTAGCAAGTCTAAAGCTCTTCAATTTTGAAGGACTACTGATGCTAGGGAGTTAAGTTGATCTTGCAAGGTGACCAGGGAGTCGGCGACCCGTTCCATGTCACCATTTAGTTCTTGAGATAGTTTGTAGTAGAACTGAGTAGAGGTTGTGATATCACCAATGCCAGTACCTCATCCACCTAGCACTCCTGTTCCGATAACAAAAGGAAGAATGGGTACTCTTTTGTTGTGGGGCTTAGGTACAACATGATTGTATAATTCTTGTTCAGTGTAGATGGTCATAGGGGGCACTAAGAATGAGAGGAAGCACATAGATTCTGAAGAGCCATTCAAACAACAATACGCTGAGGTACCACAGACAAAAAATATTCCTGAGGGTAGGCAAACTATTCATGTGGGAGGAGTTACCCACCTGATGCATTGGGAGTTGGTTGTGTATATAGTATTGCTAAATTTTACACAGGTGAGGTTTGAGGTATGGGTTATTTCCAGATTGGAAACAAGAGGTCCTACTAAAACAGGAGTGGTGTTTATTTCTGTGCTGAAGTTGTTCCATTGTTCAGGTACAGGGATTGAAATGTATGCCCTGAAGTGTAGGGGGAGGCACATCCAACAGTTAGTAGGGTTTTGGGCCGAGACCTCATGGAGCCCAGTGAGGGTGGTATTAAATGGGCTTACCAGGCGAGTATGGGTACAGAGGGTTTCATATAGTTTTGAGAGATCTAGTCCTTTGTAGGGGCTAGGGGTGCTATGTACCCAGGTCAGTTGGGAGATTATTTCCTTTACATGTTTTTCTCTTGCCTGATCTTGAACTCCACCCCCATCAGACATACCGGTATGGGTAAAGTAAGTCCAATAGACAGTGGCTCCAATTCCTGCAGGACAACTAGGATTAATCATTTTCCCTGTCCAATAATGAGTATTTGCATGTATACAAGGAGTGGCAGAGTTATAGCAGTTACTGGGCATATGGTGTGGGCAGTGAAAGTGGGCGTTCCCTTAGATAAACTCCTATACAATGGGGCATCAATATTTCCAGGAAGCTGCATTCTCCATAGAAACTCTTGGTAAGGGGAGCTACTGGTCATACAGTGGCATTGAGGGGGTGCAATGAGAGTGAAAGGGGGTAAGAGAACAGTAAAGAGAAAAATATGATAAGGGAGGGCCATGGGGATTTACAATTTTAGTTACTTTCCTCATGGTTTTCATTTGAAGAGCAGGCACAGATCCTCTAGAGGTTGACAGGAATAGCTAGCATTGTATTTTAGCCCTAAGGATTTAACCTGCTATGAGCTGAGCTGAGCCTTTGGTTTGGAAACCCTGTAGCCACAGGTAGCAAGGAAATTTAAGAGCACTTGGGTGGCTTGATGGCACAAGGTTTCTGAATGGGCGGCTAAAAGTAAATCATCCACGTACCGAAGGACAAGAGTGTCCAAGTATGAGAATCGGCTCAAGTCTTGGGCTAATGTCTGGCCAAATAGATGGGGGCTATCCCTGAACCCTTGGGGTAAAACAGTCCAGGTGAGTTGAGACATTGGGTTTGAAGGATCTTCAAAGGCAAACAAGAATTGAGAGTCAGGATGTATAGGGTTGCAGAAAAAGGCATCCTGAAGGTCCAGGACTGTAAACCACTCTGCTTCCTCTGGTATTTGGGAAAGCAGAGTATAAGGGTTAGGTACAGCTGAGTATAGAGGAATAACAGCCTCATTGATAGTCCTGAGATCTTGCACTAACCTCCACTGTCCATTGGGTTTCTGTACTCCTAAAATTGGAGTATTGCAGGGGCTATTGCATGGTTTTACTAGGCTAGGCCTTGGGCTTTTAGGTCCTTAACAATCTTTTGGAGTCCTTGTTGGGCCTCAGGTCTAAGGGGGTCCTGCATTTCGCAGGGAAAGGAGGTGGCATCCTTTAGTTTAACTTGAACAGGATGGGCATTCTTTGCTTATCCATATTGTCCTTCTGTTGCCCAGACTTCAGGATTAATTCCTTCCTCAAGCAGGGGACAACAAACGGGTGTTCTTTCCCCTATGTTCAGGTGTATAACGGCCCCTGCTTTTGCTAGAATGTCTCTCCCTAACAAGGGAATGGGGCTTTCAGGCATAATTAGAAAAGCATATGAAAAAAGTAAAGTTCCCCAGCCATGACTTAGTGGCTGGGAGAAGTATCTAGTGACTGGCTGTCCTAGCACCCCTTGGATAGTGACAGATCTGGATGACAGTTGTCCAGGACAGGAGAGTAAGACTGAGAAGGCTGCACCAGTGTCCAGGAGACAGTTAACCTCCTGGCCCTTGATGGTCAAGCATACCCGGGGCTCTGTGAGGGTGATGGCATGGGCTGGTGCTTGCCCCAGACACCCTCAGTCCTGCTGCTGGGTCATCTGGTTAGTGACTTCTGACTCAAAGGAACTTCATCCCCTGGGGCAGTGGGCCTTCCAGTGATTCCCTTAACATAAGGGGCATGGAAGAGGGGGCAGCTTACTTCTACTTGGACAATCTTTTTTAAAGTGTCCTTGTAGACCACACTGGAAGCAAGCCCTATTAGGTATTCGATTTGCCCAGCTTTTCCCTTTTCCAGAGCCTCCAAAGTCCGCTTGCCTGTGGGCCATGAGTAAAGCGGTGGCCTTTTTTAAAATCCTGTTTGTCCCATTCTACCTGCTCCTCCTGATCTCTATTATAAAAAACTGAGGTTGCCAAGTTCAACAGGGTTTCTAAGTTTCGCTCCGGGCCTAAGGCAGACTTTTGAAGTTTTTTTCTAATGTCTGCAGCTGACTGAGTGATAAACTTATCCTTTAAGATTGGTTGGCCTTCAATAGAGTCAGGTGACAGGGAGGTATGCTTCCTCAATGCCTCCCTTAGTCTCTCCAGAAAGGCAGTAGGATTTTCTTCCTTTCCCTGTGTTATAGTGGACATCATTGAATAATTCATAGGCTTCTTCCTAATTTTCCTTAGTCCTTCTAGCATGCAAGTTGGCAAATGTCTGCGGCACCAATCTCCATGTTCTGATTCTGTGTCTCAATGAGGGTCTACACTGGGAACTGCCTGCTGGCCTGTGGGGAATCATTCTTTCCTCTGTTGTCATCCTATCATTGACCTGACTGAGATACAAGAGATTGCCAAACTCTCGGGCTGCAGTTATGACGGCACTTTTTTCATTTGGGGTTAGTGTCTGATTTAGCAGTAACATTATATCTCTCCAAGTCAGATCAAAGCATTGTCCTAACCCTTGTAAAACATCAATATAGCCATCAGGGTTATCTGAGAATTTACCGAGGTCTATTTTAATTTGCTTTAAGTCTGAGAGAGAAAAAGGTACACGCACTCTGGCTGGGCCGAATTCTCCTCCTCCCACTGCTTGGAGGCGGCATAATTGGGGAATATTGCCACTCTTTGGTTCATTGTTTACCCCTTTGTCTGTCTCTTTTGGACCATTTGGGTTGAAGGGGGTCCTTAATAGTTGGAGAAGGAGTTGGGGGGATGCTGGCGTAGGGAGGTAGACTCTGAGGGCTTCCTGTAGGGCATAAATCACACTTTCTACATAATTGCGAGTTGTCTCTTAATGAAAAGAAAGTTTGTACATATGGCAATTCACTCCATTTGCCTTCTTTTCTACAAAAGAGGTCTAGCTGTAAGATGGTGTTATAATTTATACTTCCCTCAGGAGGCCAGGTTTCTCCCCCTTGAAGAGGATATCATGGCCAGGCGGTACTGCAGAAGAATGTAAGTCATTTCTTTCTTAGAGTCTGAGGGTCAAATTGGTCCCAATTCTCCAGAATACATCTTAGGGGCATTTTTGCCTTGGGGGAACACTTCCCATCTGAAAAAAGAACATAGGGATGCCAGCACCCCTACTCATTTTCCGATGAGCATTAGTCCTAGAGCATCCTCTATAGTCCTAATGCTTATTCCTTTCCAGGGTGCATAACCACCTATGGACCTCTGCTTATCGGATTACATATGCTCACCGATGTAGCAGTCCTGCACACCTTTTCCTGCCTCTCTTGACCACAAAGAAAGGGGTCTGGGCTACTGGATTCTAGTGTTCCTTTACCAGCATGTCCAACATCGCCTTTGCACTCAGGGGTGAGTCCTAGAGCCAGGCTAGGTTCCTGAGTATTTCATAACAACCCACCTGCCCCATCAAGATGCATTCCCATAAACAACAGTTTTTATGCAAATTCGTTTCAGAGAAGGTGTAAGTAAGGTTTTGAGTCAGGACTGAGATAGTCTTTTGATTCTGTAAGTACTTTAAGGCTTGGCTGAGTGCAAACAGCTTGCACGTTTGAGGAGACCAATTATTAGGCAATTTTTCTAACTCTGCTTCCACAAGAGTCTCCCTATCAATTACTGAATACCCATTGTGGTTTTTTCCTCAGTCACCTGGGAGGGACCATCTATAGTCCTGTCCTGAAGGGAGTTCCTCCTAGGTCTGGTCAGGCCTTTGTATGGTAATTAAGATTTAAATCCCCTGTTAGGAAATTGGCTGGGTTAGGGGAATTATCAGTGGTTGGTGTTAAATTAACTTTTTCTAACAGAATAGCCCCATACTTTAAGATTTTTGAGTTAGTAAGCTACTTTTTTGCTTTTTTGACTTAGAATAATTCTGAACTGGTGAGGTGTGCTCACAATGACATTTCCTCTAAAAGTTACTTTTCTACTTTCTTTTGTTAGCAAAGCAGTTGCTGCTACAGATTGAATGCCTCCGCGGGTTACTGGGTTAAGGATTTTTGATAGGAAAGCTATGGGTTGTCAGCGGTCTCCGTGTTTTCAGGCTACTCCCTTGTTTACACTGACAAAGTAGTATTGGAGTATTATAGCGTCATGGAGAAGACCTTCAATTATCAATTATAGGTTTGAAATTTACCCTGGCTTTTAAAGGAATAGGGCACACTTTTTTTTTTGTTTTTTTGGTTTTTTGTTTTTTTGTTTTTTTGTTTTTTTTTTTTTACTATTTATATCTTTCTTTTTCTCTTTGACTCCCTCTTTGTCTCTCTCTCCTCCATCTCACTCTCTGTCCTCCGTGTCACTCTCTCTCCTCCATCTCGCTCTATCTCCTCCATCTCACGCTCTCTCCTCTGTCTCGCGCTCTCTCTCCTCCGCCATTACAAGCTTGGGGCCCTGGCAAGGGTGGTAGGGAATGGGTCCCACATAACTGCCCATGTCGAGAGCTGTATACCTAAATCAGGAGGGACATCAGGAATAAGAGTCCCTGGATTTATAGCCTAGATGCCTAAGGATGCAGCATAGAGCTTCCTTAGATCCCTTTGGAGATACAACTTGCTAGATGAAATGAAAGTCTGAACCATTAGTACCTAGGAGGTAGGGATCAGGGGAAGTAGATTCAGAAGTAAGGAGAATTTTGGGGCTACACTTTCAAGAAAGTCGTGGTCGGGACCCAGGAGGTATGGGCCAGAAGGAAAGGTAGGGGCGAACGCATGGGTGACTGTTGAGCAGAGACTTCTAGCTGTGCCATGATCTCAACTGGCTAATGCCAGGAGTTCGGGAGGACAGCTTTCTGCCTCTAGTCAGACCTCAGCTTCCCCAAGAAAATTGAAAGTGAAAGCTGGCTCCAGGCAGACGAACCCTTCTGGGTTGGGGATTGTTAGAAAGCCCTTCCCCTGATAGCCTCACACCTGAGTTTTAAGTCCGGTGGCCACGCTAATCGTTTTTATTTTTATTTTTATTTTATTTTATATTTTTTTGAGACAGAGTCTCACTCTGTTGCCCAGACTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCACACGCTAATCATTTTTAACCTGCGGACAGGTGCCTGGTATTTTCCTCCAATTCTAAGGAAGGATAGGACAGAATAGCAAGCGAAAGAGGTCCAATATTACTCACTGCTTTGGAGATCTCTTCGTGGTTACCAAAATGTCACCGGGGGTTCCTTGCTCCCAGAGCTCCCAAGATGGCAGCAGGCCACTTCCAAGATGGTGGCAAGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10769:HG2_PB_PB10Xdip_14192:HG2_PB_assemblyticsPBcR_11220:HG3_PB_assemblyticsfalcon_11582:HG2_PB_assemblyticsfalcon_11587:HG2_PB_SVrefine2Falcon1plusDovetail_5196:HG2_Ill_SVrefine2DISCOVARplusDovetail_5587:HG2_PB_SVrefine2PBcRplusDovetail_4763:HG2_PB_SVrefine2PB10Xhap12_12638:HG2_10X_SVrefine210Xhap12_12074:HG3_PB_SVrefine2PBcRDovetail_8445:HG4_Ill_SVrefine2DISCOVARDovetail_12150:HG3_Ill_SVrefine2DISCOVARDovetail_12383:HG4_PB_SVrefine2PBcRDovetail_8704:HG2_PB_SVrefine2Falcon2Bionano_8587;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12074:HG2_PB_SVrefine2PB10Xhap12_12638:HG2_PB_SVrefine2PBcRplusDovetail_4763;NumExactMatchSVs=3;ClusterMaxShiftDist=0.204479;ClusterMaxSizeDiff=0.204479;ClusterMaxEditDist=0.22863;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=7194;DistBack=30786;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=672;REFWIDENED=18:47975615-47976286;PctSeqSimilarity=0.9976;PctSizeSimilarity=0.9999;PctRecOverlap=0.955;SizeDiff=-1;StartDistance=-324;EndDistance=-324;GTMatch=0;TruScore=98;MatchId=2410.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:100:1/1:1:28:1:19:./.:0:0:0:0:./.:0:1:1/1:0:970:.:7246:.
chr18	48949788	HG2_PB_SVrefine2Falcon1plusDovetail_5197	A	ATTTATCTGTGTAACAAACCTGCACATCCTTCACATGTACCCTGGAACTTAAAAGTTGAAAAATTAATATTTGGTGCCTGTGTTCTGCCTTCTGTTAGATGTTTTGGAATATCAACCCCACCTGTATGCATTCAAAGTCAGCAGCCCACCACAGAAAGACAGCTAGATTTGGTTTCAGGAGCACTAGTTCCTAGATCCTTATTCTCTCCAAAGGTGGGAACTTGATTAAGTTGCTCAATTGCTCCGAACCTCCATTAATTCATCTATATAGTGGAGAAAACAATATCTGCTCTGCCCTTGTCATTGGGCTGAGGGTAGGATCATGGGAAAGAAAATGGCTGAAAACCTGCTTACCAACTGGAGGAGTCTCATTCTCAGCTCGGAGGGGGGCCATGAATGGCCTCTGGGTCCTGTTAGTGTTCCTCAAAGAATACCTAGGGGTCTTCAGTGTTTTTTCACAAGAAGAGTTAGGTGTTAGATATTTTTATGAAGTTATTGATGTTTTATATTTTAAGTTCTTGTGGAGTATATGATTTCTTTACTTTCGTTCCCTTCTCTTTTTTTCTCCAAATATTCCTCTCAAGCAGTGCATTCATTATTAAAATATAATCAGAGTGTGTGCCAGTAAGTTAACAGCATGAGGGTAGGAAATTGAAGGCTAAAACATGAATTCTGTTTGTTAATGTTGATTGAGAAGCAAAGTAAAAATGAGACAGCAGATTTAAAATTTATTTCAAAATTCAGTTTCCATCCTCAAACTTATCGCCCTAATATTTACTCATTTTAAAATTTATATTTTGGTCATCTTTCCTACAGCAGAGATCTTTGATTTTTTTTTTTTACAAACATATTTTAGTTTTTAAATTATTTGCTTTGTTACCATTATTAACACCTTGCCACTTTGCAGTTTCACTGTTTTAAAACAAAGATTCTATTAATTTAAGGTTGAACGTTTCTTTTCGGTGATGTCTTTTTTCATTTTTAAAAACAGCCTTAGTGAGATATAATTCATATATCATATAATTTACTCATTTAAAGTGTGTAACTCAATGGCTTTTACTATATTCACAGAGATGTGCAACCATCACCATAAACAATATTAGAACACTTTTATCATCCCCGAAAAAAACCTCATACCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10770:HG2_PB_pbsv_17404:HG4_PB_pbsv_17304:HG3_PB_pbsv_17074:HG4_Ill_Spiral_1349:HG2_Ill_Spiral_1141:HG2_PB_PB10Xdip_14193:HG2_Ill_breakscan11_4781:HG4_PB_HySA_25312:HG4_Ill_MetaSV_2206:HG4_Ill_GATKHCSBGrefine_11778:HG2_Ill_GATKHCSBGrefine_11415:HG2_PB_HySA_31657:HG3_PB_assemblyticsfalcon_11588:HG2_PB_assemblyticsfalcon_11593:HG2_PB_assemblyticsPBcR_11225:HG2_PB_SVrefine2PB10Xhap12_12639:HG4_PB_SVrefine2PBcRDovetail_8705:HG4_Ill_SVrefine2DISCOVARDovetail_12153:HG2_PB_SVrefine2PBcRplusDovetail_4764:HG2_PB_SVrefine2Falcon1plusDovetail_5197:HG2_Ill_SVrefine2DISCOVARplusDovetail_5590:HG2_10X_SVrefine210Xhap12_12079;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12079:HG2_Ill_SVrefine2DISCOVARplusDovetail_5590:HG2_PB_SVrefine2Falcon1plusDovetail_5197:HG2_PB_SVrefine2PBcRplusDovetail_4764:HG4_Ill_SVrefine2DISCOVARDovetail_12153:HG4_PB_SVrefine2PBcRDovetail_8705;NumExactMatchSVs=6;ClusterMaxShiftDist=0.138801;ClusterMaxSizeDiff=0.1379;ClusterMaxEditDist=0.177557;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=1138;DistBack=16653;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=18:48949789-48949793;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9991;PctRecOverlap=0.9965;SizeDiff=-1;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=2411.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:60:0|1:26:0:0:37:0|1:31:0:0:19:0/1:32:20:0/1:47:69:.:.:.
chr18	49216218	HG2_PB_SVrefine2PB10Xhap12_12641	T	TCAGTGAGTTTTCTTTCTTTTTTTTTTTTTTTTTTTTATTTTATTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATAATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCAAGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTACTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGTATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGCATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCATCCCAGAGATTCTGGTATGTGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAATATATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAATATTTAGGATAGTTAGCTCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAATTGCCAGTCTGTGTCTTTTAATTGCAGATTTAGTCCATTTAATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTCTCTAAACTTCCCTTCTGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCACATCGGCTCCTGAGGCTTCTGCATTCTTCACATAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAATCATTCTCCATCCAGCTTTGTTCGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTGGTGTGGATGTCCTTTCTGGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCTGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAATCTCGTGGTGCGCCGTTTTTAAGCCGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGTGAGGCAATGCCTCCCCTGCTTCGGCTCGCGCAGGTGGCACACCACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTAACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4782:HG2_PB_assemblyticsfalcon_11598:HG3_PB_assemblyticsfalcon_11593:HG2_PB_SVrefine2PB10Xhap12_12641:HG2_PB_SVrefine2Falcon1plusDovetail_5198:HG4_PB_SVrefine2PBcRDovetail_8707:HG4_PB_SVrefine2Falcon1Dovetail_10772:HG2_PB_PB10Xdip_14194;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12641;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0090819;ClusterMaxSizeDiff=0.0090819;ClusterMaxEditDist=0.0155913;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=6024;DistBack=95108;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=18:49216219-49216230;PctSeqSimilarity=0.9948;PctSizeSimilarity=0.991;PctRecOverlap=0.9911;SizeDiff=-55;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:39:./.:1:22:20:7:0|1:31:0:0:7:0/1:32:11:0/1:193:605:.:.:.
chr18	50986539	HG2_Ill_GATKHCSBGrefine_11429	T	TGGGTCTTCATATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4784:HG3_PB_pbsv_17086:HG2_PB_pbsv_17413:HG3_PB_assemblyticsfalcon_11609:HG2_PB_assemblyticsfalcon_11616:HG2_PB_SVrefine2Falcon1plusDovetail_5202:HG3_Ill_MetaSV_2286:HG3_Ill_GATKHCSBGrefine_11338:HG2_Ill_MetaSV_2143:HG2_Ill_GATKHCSBGrefine_11429:HG2_10X_SVrefine210Xhap12_12084;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12084:HG2_Ill_GATKHCSBGrefine_11429:HG2_Ill_MetaSV_2143:HG3_Ill_GATKHCSBGrefine_11338:HG3_Ill_MetaSV_2286;NumExactMatchSVs=5;ClusterMaxShiftDist=0.127329;ClusterMaxSizeDiff=0.127329;ClusterMaxEditDist=0.177019;PBcalls=5;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=321;DistBack=10;DistForward=8172;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=18:50986540-50986552;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2413.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:32:0|1:24:3:0:24:1|0:0:9:19:0:0/1:15:2:0/1:5:29:.:.:.
chr18	51425725	HG2_PB_PB10Xdip_14200	G	CAAAAGAAATATATTTTTTTTTTCTTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCGCTCCCCCACCCCACCACAGTCCCCAGAGTATGATATTCCCCTTCATGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCACAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACCAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGCTTTTTTATTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGCATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGGTATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTTATTGCTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCCTTGAGAAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCCTAAGGAGATTTTGGGCTGAGACGATGGAGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCCGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCTGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCCAATTTCAGCTCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGGATGTATGTGTCGAGTAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTGAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTATGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGTGTCCCAGAGATCCTGGTATGTTGTGTCTTTGTTCTCATTGGTTTCAAAGAATATCTTTATTTCTGCCTTCATTTCTTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCTTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGATGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTACTGTAGATGTCTATTAGGTCCGCTTGGTACAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGGAGCATTTAGTCCATTTACATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTCACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGTATTTTATTTCTCCTTCACTTATGAACTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCCTTTGAGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGTAGAGTGTTTTCCAACTTGGTTCCATTCTCCCCATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAGTCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTGGATGTCCTTTCTGTTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCTGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCTGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGCTGCGCCGTTTTTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGTAACTCCCTGACCCCTTGCACTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCCCGGTGCGCGCACCCACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCAGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCTCCCC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_14200:HG4_PB_pbsv_17317:HG3_PB_SVrefine2Falcon1Dovetail_10761:HG2_PB_assemblyticsfalcon_11620:HG4_PB_HySA_25330:HG4_PB_SVrefine2PBcRDovetail_8710:HG2_PB_SVrefine2PB10Xhap12_12647:HG2_PB_SVrefine2Falcon1plusDovetail_5204:HG2_PB_HySA_31685;NumClusterSVs=9;ExactMatchIDs=HG2_PB_PB10Xdip_14200;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0524909;ClusterMaxSizeDiff=0.0524909;ClusterMaxEditDist=0.119077;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=6038;DistBack=8351;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=18:51425726-51425743;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9985;PctRecOverlap=0.9987;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2414.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:42:0|1:39:0:0:33:./.:18:0:2:11:0/1:27:13:0/1:206:627:.:5969:.
chr18	53634932	HG2_PB_pbsv_17424	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGACGGAGTCCTCGCTCTGTCGAACCAGGCTGGACTGAGGACTGCAGTGGCGAAATCTCGGCTACGCAAGCTCGCGCTTTCCGCGGGTTAACGCCATTCTCCTCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCCACCCGCGCCCGGCTAATTTTTTGTAATTTTTAGTAGGACGGGGTTCAACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCGTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGATTCAGGCGTGAGCCACCGCGCCGGGCCTTTTTTTTCTTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5210:HG4_PB_pbsv_17325:HG2_PB_pbsv_17424:HG3_PB_assemblyticsfalcon_11624:HG3_PB_pbsv_17096:HG2_PB_PB10Xdip_14207:HG2_PB_assemblyticsfalcon_11635:HG2_PB_assemblyticsPBcR_11258:HG2_PB_SVrefine2PBcRplusDovetail_4775:HG2_PB_SVrefine2PB10Xhap12_12654:HG3_PB_SVrefine2Falcon1Dovetail_10765:HG2_PB_HySA_31698:HG3_PB_HySA_26242;NumClusterSVs=13;ExactMatchIDs=HG2_PB_pbsv_17424;NumExactMatchSVs=1;ClusterMaxShiftDist=0.230885;ClusterMaxSizeDiff=0.230885;ClusterMaxEditDist=0.254873;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=339;DistBack=0;DistForward=26736;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=18:53634933-53634933;PctSeqSimilarity=0.9602;PctSizeSimilarity=0.9882;PctRecOverlap=0.9528;SizeDiff=4;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=96;MatchId=2416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:57:0|1:27:1:1:49:./.:0:0:25:0:0/1:14:4:0/1:7:18:.:.:.
chr18	54729431	HG2_10X_SVrefine210Xhap12_12096	T	TCTGTACTCTTACAACTCAGCCATTGCTCTTTGTGGCCCAAGCCAGCTGGGTTGTCCCCAGGCCCACAGGACTCCCCACGTATGGGTTGGATCCCATCTGAACCTTGATTCCCACACCTGCCTGCTGCCAGACCTCGTCTGCCAATTGTGGCTTTGCAGAGCCCGAGGGGTGGGTTTCTCCCTGAAGACCTTCTGACAGACACCTGCACTGAGAAATCGAACTCCCAGCCTCCTTGCGGGTGGTCTCAGATCTGCCAAGCCACCAGGCGTGAGGCTGGCAAGAGCGGAAGGAAAGCTGCCGAATCAGCTCTGGAATCCCACAGCTGACGCCGCCTCTGGTTCTGCAGGAGAGGAGCCCAGCTTTGTTTTGCAGTCAAAGCTGCCTCTTCTGTTTTCTGCACCCAACCAAGATGCCATCTGAGACCGAAACTTTCCAATTCCTGTGATAAATAGAAGAGTGATGATAATGATAATGGCTGAGCCTCTTCTGGCATCTACTATGTCCTGGATACTGCTCTAGATGCTTCATGTATATTAATCCTTGCCACAACCCTGTGAGCGGTGTACTTTTATCATAGGCTATGCCCTTTTCGTAGATGGGAAGACTGAAGCACAGTGAGTTTCAGTGATGTGCCTGGGTCACGCCAGCCGCTACATGACTCCTGGTTGTGCGTCTCTAACGATTCCACCCTACTGCCCCTCTGCTGCTGCCCCTCTGCTGCCACCCAGAGCAACAGACAGCTTCAGGGCTACCCTCCTGCCTGACTTCCAGCTTCCCTTGTCACACAGAGCAGGGGACAGCAAATTGGGCAGCTGCCGCCCAGGATCAATGATCACAGTCTTTTGAGTTGAGTTCTCTGTCAGGGGATGTGGTCTCCATGCTGCCTCTTTCTACCCCTGTGCCTGGGGCAGGCATTGCCCACGGATCCGGGGCTTTCTCTCCCCTGCCAAGGCCACA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_14215:HG4_PB_pbsv_17332:HG2_PB_pbsv_17430:HG2_PB_assemblyticsfalcon_11643:HG3_PB_pbsv_17101:HG2_PB_assemblyticsPBcR_11266:HG3_PB_assemblyticsfalcon_11633:HG4_PB_assemblyticsfalcon_11446:HG2_Ill_breakscan11_4786:HG2_PB_SVrefine2Falcon1plusDovetail_5213:HG2_PB_SVrefine2PBcRplusDovetail_4777:HG2_Ill_MetaSV_2148:HG3_Ill_MetaSV_2290:HG3_PB_SVrefine2PBcRDovetail_8456:HG3_Ill_SVrefine2DISCOVARDovetail_12410:HG3_PB_SVrefine2Falcon1Dovetail_10768:HG4_PB_SVrefine2Falcon1Dovetail_10785:HG3_Ill_GATKHCSBGrefine_11348:HG2_Ill_GATKHCSBGrefine_11444:HG4_Ill_GATKHCSBGrefine_11803:HG2_Ill_SVrefine2DISCOVARplusDovetail_5615:HG2_10X_SVrefine210Xhap12_12096:HG4_Ill_MetaSV_2215:HG2_PB_SVrefine2PB10Xhap12_12657:HG2_PB_HySA_31709;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12096:HG2_Ill_SVrefine2DISCOVARplusDovetail_5615:HG4_Ill_GATKHCSBGrefine_11803;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0744956;ClusterMaxSizeDiff=0.0744956;ClusterMaxEditDist=0.251377;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=957;DistBack=23248;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=18:54729432-54729434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2418.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:96:1/1:0:33:0:33:1/1:0:18:0:11:1/1:0:27:0/1:20:112:.:.:.
chr18	55120816	HG3_PB_assemblyticsfalcon_11636	T	TAGGCAGTTGTAGTCTCCTGTAATTCATAACAAGCTGTCCCTAGTTATTGAACGTGTTTACCCTGTAATCCCAGAA	20	PASS	ClusterIDs=HG3_PB_pbsv_17103:HG4_PB_SVrefine2Falcon1Dovetail_10787:HG4_PB_pbsv_17334:HG4_Ill_svaba_21439:HG4_Ill_manta_3963:HG4_Ill_Krunchall_23676:HG4_Ill_GATKHC_27520:HG4_Ill_GATKHCSBGrefine_11804:HG4_Ill_Cortex_1535:HG4_Ill_250bpfermikitraw_22636:HG4_Ill_150bpfermikitraw_21779:HG3_PB_assemblyticsfalcon_11636:HG3_Ill_svaba_21710:HG3_Ill_manta_3825:HG3_Ill_Spiral_17792:HG3_Ill_Krunchall_22925:HG3_Ill_GATKHC_27433:HG3_Ill_GATKHCSBGrefine_11350:HG3_Ill_Cortex_1588:HG3_Ill_250bpfermikitraw_22335:HG3_Ill_150bpfermikitraw_21703:HG2_PB_assemblyticsfalcon_11646:HG2_PB_assemblyticsPBcR_11272:HG2_Ill_svaba_21514:HG2_Ill_manta_4674:HG2_Ill_SpiralSDKrefine_7378:HG2_Ill_Krunchall_23348:HG2_Ill_GATKHCSBGrefine_11446:HG2_Ill_Cortex_3735:HG2_Ill_250bpfermikitraw_23008:HG2_Ill_150bpfermikitraw_21691:HG2_Ill_breakscan11_4787:HG2_PB_PB10Xdip_14217:HG4_PB_assemblyticsfalcon_11451;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21691:HG2_Ill_250bpfermikitraw_23008:HG2_Ill_Cortex_3735:HG2_Ill_GATKHCSBGrefine_11446:HG2_Ill_Krunchall_23348:HG2_Ill_SpiralSDKrefine_7378:HG2_Ill_manta_4674:HG2_Ill_svaba_21514:HG2_PB_assemblyticsPBcR_11272:HG2_PB_assemblyticsfalcon_11646:HG3_Ill_150bpfermikitraw_21703:HG3_Ill_250bpfermikitraw_22335:HG3_Ill_Cortex_1588:HG3_Ill_GATKHCSBGrefine_11350:HG3_Ill_GATKHC_27433:HG3_Ill_Krunchall_22925:HG3_Ill_Spiral_17792:HG3_Ill_manta_3825:HG3_Ill_svaba_21710:HG3_PB_assemblyticsfalcon_11636:HG4_Ill_150bpfermikitraw_21779:HG4_Ill_250bpfermikitraw_22636:HG4_Ill_Cortex_1535:HG4_Ill_GATKHCSBGrefine_11804:HG4_Ill_GATKHC_27520:HG4_Ill_Krunchall_23676:HG4_Ill_manta_3963:HG4_Ill_svaba_21439:HG4_PB_SVrefine2Falcon1Dovetail_10787;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0784314;ClusterMaxSizeDiff=0.0653595;ClusterMaxEditDist=0.230769;PBcalls=8;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=75;DistBack=42379;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=18:55120817-55120818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2419.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:1:6:0:8:1/1:0:33:0:19:1/1:0:56:./.:.:.:.:.:.
chr18	55380988	HG2_Ill_GATKHCSBGrefine_11449	C	CTGGGATTATAGGTGTGAGCCACCGTGCCCAGCTGTGCCAGGCTAATTTTTGTATTTTTTGTACAGACAGGGTTTCACGATATTGGTCAGGCTGATCTCAAACTCCTGACCTCATGATCCGTACACTTTGGCCTCCCAAAGTGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12101:HG3_Ill_svaba_21713:HG2_PB_pbsv_17438:HG3_Ill_Spiral_17795:HG3_PB_HySA_26262:HG3_Ill_GATKHCSBGrefine_11351:HG2_Ill_svaba_21516:HG2_Ill_SpiralSDKrefine_7381:HG2_Ill_SVrefine2DISCOVARplusDovetail_5622:HG2_Ill_MetaSV_2151:HG2_Ill_GATKHCSBGrefine_11449:HG2_Ill_breakscan11_4788:HG2_PB_HySA_31716:HG3_PB_pbsv_17110:HG3_PB_SVrefine2Falcon1Dovetail_10774:HG3_Ill_SVrefine2DISCOVARDovetail_12417:HG2_PB_SVrefine2Falcon1plusDovetail_5220;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11449:HG2_Ill_MetaSV_2151:HG2_Ill_SVrefine2DISCOVARplusDovetail_5622:HG2_Ill_SpiralSDKrefine_7381:HG2_Ill_svaba_21516:HG3_Ill_GATKHCSBGrefine_11351:HG3_Ill_Spiral_17795:HG3_Ill_svaba_21713;NumExactMatchSVs=8;ClusterMaxShiftDist=0.154386;ClusterMaxSizeDiff=0.147368;ClusterMaxEditDist=0.308725;PBcalls=6;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=143;DistBack=-168;DistForward=24;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=276;REFWIDENED=18:55380884-55381159;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2420.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:33:0|1:28:3:0:25:1|0:1:19:15:0:0/1:28:18:./.:.:.:.:.:.
chr18	55949355	HG3_PB_SVrefine2Falcon1Dovetail_10779	T	TAAAAGTCAGGTTGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTAGTTGCGGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4789:HG2_PB_HySA_31734:HG2_PB_pbsv_17446:HG4_PB_pbsv_17346:HG3_PB_assemblyticsfalcon_11653:HG4_PB_HySA_25366:HG2_Ill_MetaSV_2154:HG3_PB_SVrefine2Falcon1Dovetail_10779:HG4_Ill_GATKHCSBGrefine_11812;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10779;NumExactMatchSVs=1;ClusterMaxShiftDist=0.196721;ClusterMaxSizeDiff=0.196721;ClusterMaxEditDist=0.219672;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=307;DistBack=72786;DistForward=34825;DistMin=34825;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=387;REFWIDENED=18:55948982-55949368;PctSeqSimilarity=0.9968;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:33:0|1:37:2:0:25:0|1:14:0:0:6:0/1:35:8:0/1:7:23:.:.:.
chr18	56217576	HG4_Ill_SVrefine2DISCOVARDovetail_12190	A	AACAACCCCATCTCTGTCTCTATCACATACAACCCCATCCCCATCTCCATCACCTACAACCCCATCCCATTTCCATCATATATGACTCTACCCCCATCTATATCATATACAACCCCATCCCCATCTCCATCATATATGACTCTACCCCCATCTATATCATATACAACCCCATCCCCATCTCTATCACCTACAACCCCATCCCCATCTCCATCACCTACAACCCCATCCCCATCTCCATCATATATGACTCCACCCCCATCTATATCATATACAACCCCATCCCCATCTCTATCACCTACAACCCCATCTCCATCTCCATCACCTACAACCCCATCCCCATCTCCATCATATATGACTCTATCCCCATCTGTGTCATATACAACCCATCCCCATCTATATCACAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10781:HG2_PB_pbsv_17448:HG3_PB_HySA_26274:HG2_PB_HySA_31738:HG4_PB_HySA_25370:HG2_PB_PB10Xdip_14230:HG4_PB_pbsv_17348:HG3_PB_SVrefine2PBcRDovetail_8468:HG4_PB_SVrefine2PBcRDovetail_8726:HG4_Ill_SVrefine2DISCOVARDovetail_12190:HG2_PB_SVrefine2PBcRplusDovetail_4787:HG2_PB_SVrefine2PB10Xhap12_12670:HG2_PB_SVrefine2Falcon1plusDovetail_5226:HG2_Ill_SVrefine2DISCOVARplusDovetail_5634:HG4_PB_SVrefine2Falcon1Dovetail_10797;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5226:HG2_PB_SVrefine2PB10Xhap12_12670:HG2_PB_SVrefine2PBcRplusDovetail_4787:HG4_Ill_SVrefine2DISCOVARDovetail_12190:HG4_PB_SVrefine2PBcRDovetail_8726;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0462287;ClusterMaxSizeDiff=0.0437956;ClusterMaxEditDist=0.186826;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=403;DistBack=-161;DistForward=-1;DistMin=-161;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=664;REFWIDENED=18:56217577-56218240;PctSeqSimilarity=0.9734;PctSizeSimilarity=0.9975;PctRecOverlap=0.6049;SizeDiff=-1;StartDistance=-159;EndDistance=-159;GTMatch=0;TruScore=85;MatchId=2422.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:0:10:0:16:./.:52:265:39:233:./.:0:1:./.:3:34:.:.:.
chr18	56422879	HG4_Ill_GATKHCSBGrefine_11815	A	ACTCAGCTCGCAGACTTGCCTTGGAGCCATTCTAGCTGTGTAAGCTGACTTCACACT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23025:HG2_PB_pbsv_17449:HG4_PB_assemblyticsfalcon_11467:HG4_PB_pbsv_17349:HG4_Ill_svaba_21455:HG4_Ill_Krunchall_23694:HG4_Ill_GATKHC_27538:HG4_Ill_GATKHCSBGrefine_11815:HG4_Ill_250bpfermikitraw_22652:HG2_Ill_svaba_21529:HG2_Ill_Krunchall_23365:HG2_Ill_GATKHC_27592:HG2_Ill_GATKHCSBGrefine_11456;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23025:HG4_PB_assemblyticsfalcon_11467:HG4_Ill_svaba_21455:HG4_Ill_Krunchall_23694:HG4_Ill_GATKHC_27538:HG4_Ill_GATKHCSBGrefine_11815:HG4_Ill_250bpfermikitraw_22652:HG2_Ill_svaba_21529:HG2_Ill_Krunchall_23365:HG2_Ill_GATKHC_27592:HG2_Ill_GATKHCSBGrefine_11456;NumExactMatchSVs=11;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.268908;PBcalls=3;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=15250;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=55;REFWIDENED=18:56422880-56422934;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2423.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:25:0|1:49:1:2:22:./.:15:0:1:12:0/1:24:25:./.:.:.:.:.:.
chr18	56530762	HG2_Ill_SVrefine2DISCOVARplusDovetail_5636	C	CCGCACCCCCAGCCGTAGGCCCCGGCGTGGCGGGCCGGCCGCCGCCGCCGCCGCGCGGCCTAGAGCGCGGTGCCCGGGGAGGCGCGGGGCCCGGGCCGGGCGCTGGCGAGGCCCGGCGGCGGCGGCGGCGGCGGCCGGGGAGCCCGGGAGGCGGCGG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2155:HG3_PB_pbsv_17118:HG3_PB_HySA_26275:HG4_PB_assemblyticsfalcon_11469:HG3_PB_assemblyticsfalcon_11660:HG2_PB_assemblyticsfalcon_11670:HG4_PB_SVrefine2Falcon1Dovetail_10798:HG3_PB_SVrefine2Falcon1Dovetail_10782:HG4_Ill_SVrefine2DISCOVARDovetail_12191:HG4_Ill_GATKHCSBGrefine_11816:HG3_PB_SVrefine2PBcRDovetail_8469:HG3_Ill_SVrefine2DISCOVARDovetail_12422:HG3_Ill_GATKHCSBGrefine_11362:HG2_PB_SVrefine2PBcRplusDovetail_4788:HG2_PB_SVrefine2PB10Xhap12_12671:HG2_Ill_SVrefine2DISCOVARplusDovetail_5636:HG2_Ill_GATKHCSBGrefine_11457:HG2_PB_SVrefine2Falcon1plusDovetail_5227:HG3_Ill_250bpfermikitraw_22351:HG3_Ill_150bpfermikitraw_21718:HG2_Ill_250bpfermikitraw_23026:HG2_Ill_150bpfermikitraw_21705:HG2_PB_HySA_31742:HG4_Ill_manta_3967:HG3_Ill_manta_3829:HG3_Ill_Spiral_17806:HG2_PB_PB10Xdip_14231:HG2_Ill_manta_4679:HG2_Ill_SpiralSDKrefine_7390:HG2_Ill_SVrefine2DISCOVARplusDovetail_5635:HG2_PB_pbsv_17450:HG4_Ill_MetaSV_2222:HG3_Ill_MetaSV_2296;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11457:HG2_Ill_SVrefine2DISCOVARplusDovetail_5636:HG2_PB_SVrefine2PB10Xhap12_12671:HG2_PB_SVrefine2PBcRplusDovetail_4788:HG3_Ill_GATKHCSBGrefine_11362:HG3_Ill_SVrefine2DISCOVARDovetail_12422:HG3_PB_SVrefine2PBcRDovetail_8469:HG4_Ill_GATKHCSBGrefine_11816:HG4_Ill_SVrefine2DISCOVARDovetail_12191;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0759494;ClusterMaxSizeDiff=0.0759494;ClusterMaxEditDist=0.127796;PBcalls=14;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=156;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=18:56530763-56530764;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2424.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:1:19:0:13:./.:0:3:0:3:1/1:0:13:./.:.:.:.:.:.
chr18	56602355	HG3_PB_HySA_26278	T	TCCCCCACTCTCCTCCTCCTCCCCCACTCCTCCTCCTCCCCACTCCTCCTCCTCCCCACTCCTCCACTCCTCCTCCTCTCCCTCCTCCTC	10	PASS	ClusterIDs=HG3_PB_HySA_26278:HG2_PB_SVrefine2PB10Xhap12_12672:HG2_PB_HySA_31744:HG2_PB_PB10Xdip_14232;NumClusterSVs=4;ExactMatchIDs=HG3_PB_HySA_26278;NumExactMatchSVs=1;ClusterMaxShiftDist=0.137566;ClusterMaxSizeDiff=0.137566;ClusterMaxEditDist=0.240838;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=89;DistBack=28;DistForward=48;DistMin=28;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=4;REFWIDENED=18:56602354-56602360;PctSeqSimilarity=0.9602;PctSizeSimilarity=0.8989;PctRecOverlap=0.5056;SizeDiff=9;StartDistance=40;EndDistance=40;GTMatch=1;TruScore=78;MatchId=2425.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:45:1/1:2:21:4:22:./.:20:0:21:3:./.:6:1:./.:.:.:.:.:.
chr18	57141045	HG2_PB_PB10Xdip_14236	T	TTCCTCCCCTGCTACTCACCTTCCAACCCTATTTCCTCCCCCACTACTCACCTTCCAACCCTATTTCCTCCCCCACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCCCACTACTCACCTTCCAACCTTCCCACTATTTCCCCCCTACTACTCACCTTCCAACCCTCCCACTATTTCCCCCCGACTACTCACCTTCCAACCTTCCCACTATTTCCTCCCCCTACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCCCACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCCCCACTACTCACCTTCCAACCTTCCCACTATTTCCCCCCTACTACTCACCTTCCAACCCTCCCACTATTTCCCCCCGACTACTCACCATCCAACCCTTCCACTATTTCCCCCCACTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACTACTCACCATCCAACCCTCCCAGTACTCACCTTCCAACCCTCCCACTATTCCCCCCTACTACTCACCTTCCAACCCTTCCACTATTTCCCCACTACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCTCCAACTACTCACCTTCCAACCCTCCTACTATTCCCCCGCTACTACTCACCTTCCAACCCTCCCACTATTCCCCCACTACTGCCCACCTTCCAACCCTCCCACTATTCCCCCGCTACTACCTACCTTCCAACCCTCCCACTATTTCCTCCCACCACTCACCTTCCAACCCTCCTACTA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10787:HG4_PB_pbsv_17355:HG2_PB_PB10Xdip_14236:HG4_PB_HySA_25378:HG3_PB_HySA_26292:HG3_PB_pbsv_17121:HG2_PB_SVrefine2Falcon1plusDovetail_5230:HG4_PB_SVrefine2Falcon1Dovetail_10803:HG2_PB_SVrefine2PB10Xhap12_12673:HG3_PB_SVrefine2PBcRDovetail_8471:HG4_PB_SVrefine2PBcRDovetail_8728:HG2_PB_SVrefine2PBcRplusDovetail_4790;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_14236;NumExactMatchSVs=1;ClusterMaxShiftDist=0.196382;ClusterMaxSizeDiff=0.196382;ClusterMaxEditDist=0.336207;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=758;DistBack=0;DistForward=1;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=202;REFWIDENED=18:57140872-57141073;PctSeqSimilarity=0.9732;PctSizeSimilarity=0.9565;PctRecOverlap=0.9552;SizeDiff=33;StartDistance=5;EndDistance=5;GTMatch=1;TruScore=96;MatchId=2426.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:73:1/1:1:24:3:16:./.:62:319:107:438:0/1:1:8:1/1:5:90:.:1414:.
chr18	57150107	HG4_Ill_GATKHCSBGrefine_11822	T	TAAATTACCGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_31761:HG2_PB_pbsv_17457:HG3_PB_pbsv_17122:HG2_PB_assemblyticsfalcon_11680:HG3_PB_assemblyticsfalcon_11671:HG4_PB_assemblyticsfalcon_11480:HG3_PB_SVrefine2PBcRDovetail_8472:HG4_PB_HySA_25379:HG4_PB_pbsv_17356:HG4_Ill_MetaSV_2224:HG3_PB_HySA_26296:HG4_Ill_GATKHCSBGrefine_11822:HG3_Ill_MetaSV_2298:HG3_Ill_GATKHCSBGrefine_11366:HG2_PB_SVrefine2Falcon1plusDovetail_5231:HG2_Ill_GATKHCSBGrefine_11460:HG2_Ill_MetaSV_2157:HG2_PB_SVrefine2PBcRplusDovetail_4791:HG2_PB_PB10Xdip_14237:HG2_PB_SVrefine2PB10Xhap12_12674:HG3_PB_SVrefine2Falcon1Dovetail_10788:HG4_PB_SVrefine2Falcon1Dovetail_10804;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11460:HG2_PB_SVrefine2Falcon1plusDovetail_5231:HG3_Ill_GATKHCSBGrefine_11366:HG3_Ill_MetaSV_2298:HG4_Ill_GATKHCSBGrefine_11822:HG4_Ill_MetaSV_2224;NumExactMatchSVs=6;ClusterMaxShiftDist=0.25614;ClusterMaxSizeDiff=0.252632;ClusterMaxEditDist=0.340351;PBcalls=16;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=314;DistBack=8977;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=18:57150108-57150121;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2427.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:54:1|0:0:41:31:2:1|0:0:10:25:0:0/1:28:13:0/1:12:40:.:.:.
chr18	57372758	HG2_PB_SVrefine2Falcon1plusDovetail_5233	A	AGGCAAAATGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGTCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10790:HG4_PB_pbsv_17358:HG4_PB_HySA_25382:HG2_PB_pbsv_17459:HG2_Ill_breakscan11_4791:HG2_PB_assemblyticsfalcon_11684:HG4_Ill_MetaSV_2226:HG2_PB_SVrefine2Falcon1plusDovetail_5233:HG2_Ill_MetaSV_2158:HG4_PB_SVrefine2Falcon1Dovetail_10806:HG2_PB_HySA_31764;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5233:HG4_Ill_MetaSV_2226;NumExactMatchSVs=2;ClusterMaxShiftDist=0.258503;ClusterMaxSizeDiff=0.258503;ClusterMaxEditDist=0.300341;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=316;DistBack=6;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=18:57372759-57372771;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:39:./.:8:21:27:8:0|1:24:0:0:5:0/1:29:5:0/1:9:32:.:.:.
chr18	58774980	HG2_Ill_MetaSV_2160	T	TAAAAAGACAACTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAACACACACACACACAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_25387:HG4_Ill_MetaSV_2227:HG2_Ill_breakscan11_4792:HG4_PB_pbsv_17362:HG4_Ill_GATKHCSBGrefine_11824:HG2_Ill_MetaSV_2160;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_MetaSV_2160:HG4_Ill_GATKHCSBGrefine_11824;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0291971;ClusterMaxSizeDiff=0.0262009;ClusterMaxEditDist=0.0955137;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=340;DistBack=83989;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=18:58774981-58774996;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9971;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2429.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:51:38:0|1:50:2:1:31:./.:27:0:1:4:0/1:27:10:0/1:8:46:.:.:.
chr18	59312090	HG2_PB_SVrefine2PB10Xhap12_12681	TTGTTAAAT	GTATAATTGCCTATTAATTCAAGGCATGAGGTAACTGTATTTTTCTAATAAAGTATTACTGCTGAACCAAACCAAATCACCCTTATGTATAAGAACTTAAGGTTTAGTGTTAGGTTTTCAATCTTGGGGTGGAGTGCAGCCTTTACAAGCAAGACATGAAACTCATAAGCCACAAAGGAAAAATGTGCAGATGTGACTATGTAATAATAATAATAATAATAGAGGCATCTGTCTGGCAATAACAAATGAAGCAAGCAAACAAAATCAAATCAAAAGATGAGATAGTGAGAAAATACTGTATCAGGTAGAAGACGTTAAGTTATTGGCCACACTATTCAGAGACCTATAAATCAAAGAAAAAGACCAAAAAATAACAGGAAAAGAAAGATGAGCAATACAGACAGGGAATTCACATAAGAAATACAAATGGCCCAAAAATATGTGAAAAGATATTCCACCTACTAAAGTAATAAAAATCTAAAATATAACATTTTTCTCTTTAAAAAAAATTTAAGTGTGTAGGGAAAACTAGAACTATTATACACTGTTAGCAGGCATATAAATTGATATGGAATTTTCATTTTGGAGGCATTTTTTTCAGTGCCCTTTAAAATGTATTGTATGCACACCTGGTGAGCTAACAAGTTCACACCTACAAACTTATTCCACAATAATGTTTACACATG	20	PASS	ClusterIDs=HG3_PB_pbsv_17126:HG4_PB_SVrefine2Falcon1Dovetail_10811:HG4_PB_assemblyticsfalcon_11492:HG4_Ill_GATKHCSBGrefine_11826:HG3_Ill_GATKHCSBGrefine_11369:HG2_Ill_GATKHCSBGrefine_11463:HG4_PB_HySA_25392:HG2_PB_HySA_31780:HG3_PB_SVrefine2Falcon1Dovetail_10794:HG2_PB_assemblyticsfalcon_11697:HG2_PB_SVrefine2Falcon1plusDovetail_5237:HG4_Ill_SVrefine2DISCOVARDovetail_12204:HG2_10X_SVrefine210Xhap12_12121:HG3_PB_SVrefine2PBcRDovetail_8475:HG3_Ill_SVrefine2DISCOVARDovetail_12434:HG2_PB_SVrefine2PBcRplusDovetail_4798:HG2_PB_SVrefine2PB10Xhap12_12681:HG2_PB_PB10Xdip_14242:HG2_Ill_SVrefine2DISCOVARplusDovetail_5647:HG2_PB_pbsv_17465:HG4_Ill_Spiral_1355:HG3_Ill_Spiral_17828:HG2_Ill_Spiral_1145:HG4_Ill_MetaSV_2229:HG3_Ill_MetaSV_2300:HG2_Ill_MetaSV_2162:HG4_PB_pbsv_17364;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5647:HG2_PB_PB10Xdip_14242:HG2_PB_SVrefine2PB10Xhap12_12681:HG2_PB_SVrefine2PBcRplusDovetail_4798:HG3_Ill_SVrefine2DISCOVARDovetail_12434:HG3_PB_SVrefine2PBcRDovetail_8475;NumExactMatchSVs=6;ClusterMaxShiftDist=0.120235;ClusterMaxSizeDiff=0.120235;ClusterMaxEditDist=0.228245;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=677;DistBack=-9;DistForward=-1;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=18:59312099-59312089;PctSeqSimilarity=0.9971;PctSizeSimilarity=1;PctRecOverlap=0.9883;SizeDiff=0;StartDistance=-6;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2430.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:91:1/1:1:41:0:30:1/1:0:18:1:23:1/1:0:33:./.:4:75:.:.:.
chr18	59579960	HG2_Ill_breakscan11_4793	C	CAAAGAAATACAGCAAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4793:HG2_PB_pbsv_17466:HG3_PB_pbsv_17127:HG3_PB_HySA_26308:HG2_PB_assemblyticsfalcon_11698:HG2_PB_HySA_31782:HG3_PB_SVrefine2Falcon1Dovetail_10795:HG2_PB_SVrefine2Falcon1plusDovetail_5238:HG2_Ill_MetaSV_2163;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_breakscan11_4793;NumExactMatchSVs=1;ClusterMaxShiftDist=0.143478;ClusterMaxSizeDiff=0.143478;ClusterMaxEditDist=0.254386;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=234;DistBack=68632;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=18:59579961-59579975;PctSeqSimilarity=0.9958;PctSizeSimilarity=0.9915;PctRecOverlap=0.9916;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:35:0|1:28:2:7:29:1|0:0:12:21:0:0/1:25:9:./.:.:.:.:.:.
chr18	60770471	HG2_Ill_SVrefine2DISCOVARplusDovetail_5656	A	ATGTGATGTGTGTGGTATGATATGTGTGTGGTGTGTGTGTATGCTGTGATGTGTGGTGTGTGTGTGATGTGTGGTGTGGTGTGATGTGTGGTGTGTGTGCAGGTGTGTAGTGTGGTTTGTGGTGTGATGTGTGGTGTGGTGTGTGTGTGGTGTGATGTGTGTTGTGCATGTGGTGTGATGTGTGGTTTGGTGTGTGTGTGGTGTGTGCATGTGTGTGTGTGTGTGTGGTGTGGTATGTATGTGGTGTGATGTTTGGTGTCAGGTGTAGAAGGTGTGGTGTCTGTGTGTGTGTGGTGTGTATGGTGTGTTGTGGTGTGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8738:HG2_PB_assemblyticsfalcon_11711:HG2_PB_pbsv_17473:HG2_PB_SVrefine2Falcon1plusDovetail_5246:HG3_PB_SVrefine2Falcon1Dovetail_10801:HG3_PB_pbsv_17140:HG2_PB_HySA_31807:HG3_Ill_MetaSV_2303:HG3_Ill_GATKHCSBGrefine_11380:HG2_Ill_MetaSV_2166:HG2_Ill_GATKHCSBGrefine_11475:HG4_Ill_MetaSV_2231:HG4_Ill_GATKHCSBGrefine_11839:HG4_PB_HySA_25406:HG4_PB_pbsv_17373:HG4_Ill_SVrefine2DISCOVARDovetail_12210:HG4_PB_SVrefine2Falcon1Dovetail_10818:HG3_PB_SVrefine2PBcRDovetail_8483:HG3_Ill_SVrefine2DISCOVARDovetail_12443:HG2_PB_SVrefine2PBcRplusDovetail_4806:HG2_PB_SVrefine2PB10Xhap12_12689:HG2_Ill_SVrefine2DISCOVARplusDovetail_5656;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5656:HG2_PB_SVrefine2PB10Xhap12_12689:HG2_PB_SVrefine2PBcRplusDovetail_4806:HG3_Ill_SVrefine2DISCOVARDovetail_12443:HG3_PB_SVrefine2PBcRDovetail_8483:HG4_Ill_SVrefine2DISCOVARDovetail_12210;NumExactMatchSVs=6;ClusterMaxShiftDist=0.095092;ClusterMaxSizeDiff=0.0797546;ClusterMaxEditDist=0.302115;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=11195;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=232;REFWIDENED=18:60770472-60770703;PctSeqSimilarity=0.9545;PctSizeSimilarity=0.9875;PctRecOverlap=0.3458;SizeDiff=-4;StartDistance=-208;EndDistance=-208;GTMatch=0;TruScore=76;MatchId=2432.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:37:1/1:2:14:2:17:1/1:0:137:0:137:./.:0:4:1/1:1:28:.:.:.
chr18	60932138	HG2_Ill_manta_4685	T	TGAGAGAGACCAAGGTAAGGCACCACCCTTCTGAGATACAGCGATGGGAGGTGACACAACTCTTGACATGACCAGAGCAGTGATGTCCACAGGGCAGACGGCACA	20	PASS	ClusterIDs=HG2_PB_HySA_31813:HG3_PB_pbsv_17143:HG2_PB_pbsv_17476:HG4_PB_assemblyticsfalcon_11513:HG4_PB_pbsv_17376:HG2_PB_assemblyticsfalcon_11714:HG4_PB_SVrefine2PBcRDovetail_8741:HG4_PB_SVrefine2Falcon1Dovetail_10821:HG4_Ill_svaba_21501:HG4_Ill_manta_3973:HG4_Ill_SVrefine2DISCOVARDovetail_12211:HG4_Ill_MetaSV_2233:HG4_Ill_GATKHCSBGrefine_11840:HG4_Ill_Cortex_1547:HG3_PB_SVrefine2PBcRDovetail_8486:HG3_PB_SVrefine2Falcon1Dovetail_10804:HG3_Ill_svaba_21776:HG3_Ill_manta_3834:HG3_Ill_Spiral_17846:HG3_Ill_SVrefine2DISCOVARDovetail_12444:HG3_Ill_MetaSV_2304:HG3_Ill_GATKHCSBGrefine_11382:HG3_Ill_Cortex_1597:HG2_PB_SVrefine2PBcRplusDovetail_4809:HG2_PB_SVrefine2PB10Xhap12_12692:HG2_PB_SVrefine2Falcon1plusDovetail_5249:HG2_Ill_svaba_21571:HG2_Ill_manta_4685:HG2_Ill_SpiralSDKrefine_7417:HG2_Ill_SVrefine2DISCOVARplusDovetail_5657:HG2_Ill_MetaSV_2167:HG2_Ill_GATKHCSBGrefine_11477:HG2_Ill_Cortex_3755:HG2_Ill_250bpfermikitraw_23061:HG2_Ill_150bpfermikitraw_21740:HG2_10X_SVrefine210Xhap12_12127:HG2_PB_PB10Xdip_14250:HG2_Ill_breakscan11_4796;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12127:HG2_Ill_150bpfermikitraw_21740:HG2_Ill_250bpfermikitraw_23061:HG2_Ill_Cortex_3755:HG2_Ill_GATKHCSBGrefine_11477:HG2_Ill_MetaSV_2167:HG2_Ill_SVrefine2DISCOVARplusDovetail_5657:HG2_Ill_SpiralSDKrefine_7417:HG2_Ill_manta_4685:HG2_Ill_svaba_21571:HG2_PB_SVrefine2Falcon1plusDovetail_5249:HG2_PB_SVrefine2PB10Xhap12_12692:HG2_PB_SVrefine2PBcRplusDovetail_4809:HG3_Ill_Cortex_1597:HG3_Ill_GATKHCSBGrefine_11382:HG3_Ill_MetaSV_2304:HG3_Ill_SVrefine2DISCOVARDovetail_12444:HG3_Ill_Spiral_17846:HG3_Ill_manta_3834:HG3_Ill_svaba_21776:HG3_PB_SVrefine2Falcon1Dovetail_10804:HG3_PB_SVrefine2PBcRDovetail_8486:HG4_Ill_Cortex_1547:HG4_Ill_GATKHCSBGrefine_11840:HG4_Ill_MetaSV_2233:HG4_Ill_SVrefine2DISCOVARDovetail_12211:HG4_Ill_manta_3973:HG4_Ill_svaba_21501:HG4_PB_SVrefine2Falcon1Dovetail_10821:HG4_PB_SVrefine2PBcRDovetail_8741;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0849057;ClusterMaxSizeDiff=0.0849057;ClusterMaxEditDist=0.221198;PBcalls=14;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=104;DistBack=46075;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=18:60932139-60932141;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2433.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:72:1/1:0:35:3:15:1/1:1:24:0:24:1/1:0:44:./.:.:.:.:.:.
chr18	61453333	HG2_Ill_SpiralSDKrefine_7421	G	GTATATATATGTATATATGTATATATATACGTATATACATATAATATAAGTA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21745:HG4_PB_HySA_25411:HG2_PB_HySA_31819:HG4_Ill_manta_3974:HG4_PB_pbsv_17378:HG4_Ill_GATKHC_27592:HG4_Ill_250bpfermikitraw_22698:HG2_Ill_svaba_21578:HG2_Ill_SpiralSDKrefine_7421:HG2_Ill_GATKHC_27651:HG2_Ill_GATKHCSBGrefine_11479;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21745:HG4_Ill_manta_3974:HG4_Ill_GATKHC_27592:HG4_Ill_250bpfermikitraw_22698:HG2_Ill_svaba_21578:HG2_Ill_SpiralSDKrefine_7421:HG2_Ill_GATKHC_27651:HG2_Ill_GATKHCSBGrefine_11479;NumExactMatchSVs=8;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.280702;PBcalls=3;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=70;DistForward=41;DistMin=41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=42;REFWIDENED=18:61453332-61453376;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2434.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:26:0|1:44:0:1:23:0|1:10:0:0:14:0/1:23:26:./.:.:.:.:.:.
chr18	62173781	HG2_PB_PB10Xdip_14255	A	ACAAAAGGAATTGCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTTTTTAGTAGAGGCGGGGTTTCACCACGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10824:HG3_PB_pbsv_17149:HG2_Ill_breakscan11_4797:HG2_PB_pbsv_17482:HG4_PB_pbsv_17382:HG2_PB_SVrefine2PBcRplusDovetail_4812:HG2_PB_assemblyticsfalcon_11723:HG4_PB_assemblyticsfalcon_11524:HG2_PB_SVrefine2PB10Xhap12_12695:HG2_PB_SVrefine2Falcon1plusDovetail_5252:HG4_Ill_SVrefine2DISCOVARDovetail_12213:HG4_Ill_MetaSV_2235:HG4_Ill_GATKHCSBGrefine_11847:HG3_Ill_MetaSV_2306:HG3_Ill_GATKHCSBGrefine_11389:HG2_PB_PB10Xdip_14255:HG2_Ill_SVrefine2DISCOVARplusDovetail_5662:HG2_Ill_MetaSV_2170:HG2_10X_SVrefine210Xhap12_12133:HG4_PB_SVrefine2PBcRDovetail_8743;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12133:HG2_Ill_MetaSV_2170:HG2_Ill_SVrefine2DISCOVARplusDovetail_5662:HG2_PB_PB10Xdip_14255:HG3_Ill_GATKHCSBGrefine_11389:HG3_Ill_MetaSV_2306:HG4_Ill_GATKHCSBGrefine_11847:HG4_Ill_MetaSV_2235:HG4_Ill_SVrefine2DISCOVARDovetail_12213;NumExactMatchSVs=9;ClusterMaxShiftDist=0.154799;ClusterMaxSizeDiff=0.154799;ClusterMaxEditDist=0.24025;PBcalls=11;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=321;DistBack=14828;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=18:62173782-62173798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2435.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:79:1/1:1:27:1:22:./.:0:0:0:0:1/1:0:22:1/1:2:50:.:.:.
chr18	62629440	HG2_Ill_150bpfermikitraw_21759	G	GTATATATACACACACACATACATGCATATATATACACATATATATACACAAACA	20	PASS	ClusterIDs=HG3_PB_HySA_26351:HG2_PB_pbsv_17485:HG2_PB_PB10Xdip_14256:HG2_PB_HySA_31835:HG3_PB_pbsv_17152:HG4_PB_SVrefine2PBcRDovetail_8746:HG4_PB_HySA_25423:HG4_PB_SVrefine2Falcon1Dovetail_10825:HG4_Ill_svaba_21518:HG4_Ill_scalpel_15904:HG4_Ill_manta_3977:HG4_Ill_SVrefine2DISCOVARDovetail_12216:HG4_Ill_Krunchall_23755:HG4_Ill_GATKHC_27607:HG4_Ill_GATKHCSBGrefine_11849:HG4_Ill_250bpfermikitraw_22710:HG4_Ill_150bpfermikitraw_21849:HG3_PB_SVrefine2PBcRDovetail_8491:HG3_Ill_svaba_21800:HG3_Ill_manta_3839:HG3_Ill_Krunchall_23006:HG3_Ill_GATKHC_27529:HG3_Ill_GATKHCSBGrefine_11393:HG3_Ill_250bpfermikitraw_22410:HG3_Ill_150bpfermikitraw_21778:HG2_PB_SVrefine2PBcRplusDovetail_4814:HG2_PB_SVrefine2PB10Xhap12_12697:HG2_PB_SVrefine2Falcon1plusDovetail_5253:HG2_Ill_svaba_21592:HG2_Ill_scalpel_16308:HG2_Ill_manta_4689:HG2_Ill_SVrefine2DISCOVARplusDovetail_5663:HG2_Ill_Krunchall_23419:HG2_Ill_GATKHC_27667:HG2_Ill_GATKHCSBGrefine_11486:HG2_Ill_250bpfermikitraw_23080:HG2_Ill_150bpfermikitraw_21759;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21759:HG2_Ill_250bpfermikitraw_23080:HG2_Ill_GATKHCSBGrefine_11486:HG2_Ill_GATKHC_27667:HG2_Ill_Krunchall_23419:HG2_Ill_SVrefine2DISCOVARplusDovetail_5663:HG2_Ill_manta_4689:HG2_Ill_scalpel_16308:HG2_Ill_svaba_21592:HG2_PB_SVrefine2Falcon1plusDovetail_5253:HG2_PB_SVrefine2PB10Xhap12_12697:HG2_PB_SVrefine2PBcRplusDovetail_4814:HG3_Ill_150bpfermikitraw_21778:HG3_Ill_250bpfermikitraw_22410:HG3_Ill_GATKHCSBGrefine_11393:HG3_Ill_GATKHC_27529:HG3_Ill_Krunchall_23006:HG3_Ill_manta_3839:HG3_Ill_svaba_21800:HG3_PB_SVrefine2PBcRDovetail_8491:HG4_Ill_150bpfermikitraw_21849:HG4_Ill_250bpfermikitraw_22710:HG4_Ill_GATKHCSBGrefine_11849:HG4_Ill_GATKHC_27607:HG4_Ill_Krunchall_23755:HG4_Ill_SVrefine2DISCOVARDovetail_12216:HG4_Ill_manta_3977:HG4_Ill_scalpel_15904:HG4_Ill_svaba_21518:HG4_PB_SVrefine2Falcon1Dovetail_10825:HG4_PB_SVrefine2PBcRDovetail_8746;NumExactMatchSVs=31;ClusterMaxShiftDist=0.122807;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.319328;PBcalls=12;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=85;REFWIDENED=18:62629441-62629525;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:./.:0:4:0:0:./.:1:14:1:13:1/1:2:53:./.:.:.:.:.:.
chr18	63487269	HG2_PB_SVrefine2PB10Xhap12_12700	T	TAAAAAAATCATCTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_31843:HG3_PB_pbsv_17156:HG2_PB_pbsv_17488:HG4_PB_pbsv_17390:HG2_PB_PB10Xdip_14258:HG2_PB_assemblyticsPBcR_11362:HG4_PB_assemblyticsfalcon_11535:HG2_PB_assemblyticsfalcon_11733:HG2_10X_SVrefine210Xhap12_12137:HG3_PB_SVrefine2PBcRDovetail_8493:HG4_PB_SVrefine2PBcRDovetail_8748:HG2_PB_SVrefine2PBcRplusDovetail_4816:HG2_PB_SVrefine2PB10Xhap12_12700:HG3_PB_SVrefine2Falcon1Dovetail_10810:HG4_PB_SVrefine2Falcon1Dovetail_10827:HG2_PB_SVrefine2Falcon1plusDovetail_5255:HG4_PB_HySA_25428:HG3_PB_HySA_26356;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12700:HG2_PB_SVrefine2PBcRplusDovetail_4816:HG4_PB_SVrefine2PBcRDovetail_8748;NumExactMatchSVs=3;ClusterMaxShiftDist=0.182648;ClusterMaxSizeDiff=0.182648;ClusterMaxEditDist=0.225266;PBcalls=17;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=37994;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=18:63487270-63487287;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2437.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:70:./.:0:6:0:4:./.:0:0:0:0:1/1:0:10:1/1:2:59:.:.:.
chr18	65121217	HG4_PB_SVrefine2PBcRDovetail_8756	C	CTAAATGAAGGTTTTCTATGGGAAAACTGGCTCACTAGAAAATAATAATAAGAGAGATAGAGAGAAGTATGTAGCTAAGCATGTCTATTCATGTAAATTGGGTAATTGGTTGGTGGAAATATAAAACAGGTCACAAGATTGACCCTTGGGAAGTACTTCACATGGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGAAATTAATTCTTTACTCATGATTTATTTGTGGTAATAAGCAAAGATATCTTTGAGGCATTGTATATGTTAATTAGCTCGATTTAGCTATTCCATGGGATATTTCAAAACATTATGATAAACATGATAAATATATACAATTTTTATTTGTCAATTAAAACTTTTAAAAAGTGAGATAAAAGAGCATTTACTGCCCAGCACTTTTGTGAGAACAAATATACTACTTGGATGCTGTTACAAAGCGTGAGAAAGCTCACTATAAATGCTAGAAAATGATGTTTTTTAAAAAGGCATTTGAGGGCCCAATTGAAGTTGCAACCCTGGAATTTATAATGCTACCAAACCACCTGGTTACATAATTATTTTTATACCAACACAAAGAAAAGGAAAACTTTATATCGATCTATGAATGAAATTACTTTCATGAATGTGCAGCAGTGATAGAAAAGGAAATGAAAGTTCTTCCAAGAGAGTAGTTGAAGTTTTAGACTATAAGAAAAATAGATATCAAGAAATTTGAAGTTCTCATGTGATTAAAAAAAAGTATTTAAATAACTGAATGGAAGTTTTATAAGTTTAAAGCATTGTGTTCAGATGCTGTGACATATTTGATATATGATGATATTTGAATATAGATTCTGGTATCTCACATACATTTGTGTTTTTAAGTCCCACCACTGAAAATTCTAATGAGTGTAGAATATTTTTTTGAGTCAGAATTAGATTAATACGTTTCTGTTTACTTTTGTTGAGCTGCCAAAGCTTCTGCCACCTTAAGAAAATCAATTACAGCCAATTTATGTCTGGATTTCAGGAAAGCTATTTGCAAGAATCTAAATTTAGGAAAACAAAATCCTATCACTCTGCTGTTCAAAATTGTAAGCCAATATTGGTAAAAATATATTAAATTGCTATAAGCACAATAATACAAGAACATTTAAAACTATCAATACCATTGCTTTTTTAACAAGTTCTAGCAAATTTTGATTGATAAGTAATTTTATATTGAATGGACCAAATTTGTTTAGATTTGGATTAATATACTATAGTTGGGATAGACAGATGGATAAAAAATACGCCTGACTTATTTTATATGCATTAGCTATTCCAAGAACAAGCATTTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATGAATTTTTAAAATCTAGGTCGGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAATATCTGAAATGTATATTTGAATTTTCTATCCTCTACTGACTTCTATATTCTACCTGTCTTCATGTAATATAGAAGATATCAATACCTGTAGGTGGCAGGTAAGACATTGAGTATTTTAAGAAAAGATCTTTAAATGATCATTTTGATAATTTGATGGGCACCTCTGGTTAAGCGTAACTCTCCAATTCCCAATAGCAGAAACCATTCTAAACCAAAAGAGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAACTGTCCTATGACTTTAAAACCACCACACGTGGCATAAACTATCCTGGAGTCTGTATCCAAGCAAAATACTTAAACCATGGAGGAAGTAACGTATTTCTCTTTCCATTTAAGCCATTTGAAATTCCAATTTAACAAAAGTATAAATAGAAAAACCAATTATTTTCATCAAAATATTAGTTTATACTTTAGTAAATTTATTAAACTATTTTTGACTTTATAAACTCTAGGATTGTTGAAGCCAAGTGCACCTTTATCAAGGGACTGATCAAAATAAGATTGCAGATCAGCTGAGTCTCATTATAATATAAAAGATATTCTCCAAATTTTTATTACTGAGTTTTAGTAAAGGACAAAATAATTTGCAAACTATAGCAAACATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACAATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGATAATGGTTTCTAAGCCCCTATATCTAAGCTGCTCTTATATCCATGAAGCCCTATAGTCGATGTCACAATTCAACTTTTAACATTCATTGATGGCCATAAAAGCGTAATTGATAACATTGAAATGGTGACCACTGTGTTCCTCCAAAGCTCTTTCCTGTAATAAAATATATAAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGAAAAAATTTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCCTTTTCTATACATAAAATAATGATCAGCAAACCATATACCAGGAGAAAACTTTAACATGCTTTTAAACAACATCTACTATTTAAGTATTTAAACTAGCCAATTTAACAGAAAGTAATGAAACCATTTTCTTTGTCCACTGACATTTTGACTCTACATAAAAGTAACACTGGTAGACTCTTACTTGTGACCTACTTCATTTATTTTTTTTTTTTACAAAACTAATCTTTAAAAGTCTATCGTGCAAGGCCACAGGCAAGATTTTATGAGGTAAGTAAGAAACCCACATGGATAATATTATTTAACAAAAATCCATTTTAGGAAAATAATTGGCTTCTATGAAGAATCTGTGTCAATCAAACAGGCTACAGTACACAGCCATTTGCTCTGAAGGCTAAGCAGGCTTGTACCTACTGTAAATACAACCTCTGATATGTGATGCCGAGTTTCCACAGCCTAATCCCTCAGAATCAGATCAGAACCATGGAGCTCTCTTGCTGTGAGCTCTAATATACTAACAATTTTTAGAAAAACAAATTTCTACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCTTGGTTTTTCTTTTTCAATGCTTGAGATAGGGGTATAGGTGACTAAGGCCTGGGACACATGGTAGGTTATTAATGTGGAATGATCAGTCACTTATTTTAAAGATAATTACGTATTTTAAAAATCAGGCCGGGCATGGTGGCTCACTCCTGTAACCCCAGCACTTTGGGAGGCCAAGGCCGGTCTATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAAACCCATCTCTACTGAAAAAAAAACAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAATCCTAGCTACCTAGGAGGCTGAGGCAGGAGAATCGCTTCCACCTGGAAAGCAGAGGTTGCAGTGAGCCGAGATTGTGCCATGGCACTCCAGCCTGGGCAACAGAGCAAGACTCCATCTCAAAAAAACAAACAAAAAAATTGATACTCGTTCATAAGTCCTTTCCTCCATGATACTATAAATGTATCAGGTCCACTTTTTTCTTCTTACTTTAGGTGATCCTGTGGCAGGCCAGGTCTCACTAACAGCTGAACAGGCAGGCCTCCATGGCAACTGTTTCAGCACTGAGTAGTTAAGTTTAATAGAGCCAGTGTCCTCATACGTAGGCTGGAATGCAACAAAATCCCACCAATAGTTTTGCCTAGTCCTTTCTTGGGCCTTGGAGCATGACAAGATAACGAAGGAATTCTTAACAGGACCCCTTTACAATTAAATATGTTTTATTGGGGGCCTGAAGGACCTCCCCAGACTGCCACAAGCAAGCTTTACTGGGGACTAAAGGAACTCCCCAAACCTCCATGATTTAGTAGGAGACAAGATAAGGGTAATCTCTGTGGTACCTGGACCCATTTAGATTAAGTAAATTTACTCAGGCTCCAGAGGAAGGTCTTCAAGACTCAGATCTTAGTTATAGATTAGAAGTTAATCACTTATGTCTTTAGATGAATGCACACTTACATGTAGACATATAGCTTAGAAGTTATATAAGCTCTGCAAAACTTTGTAATTTTGAGTTGGTCTGGTGATATTTCCCCAGCCTTCTTCCTATACCCGGTTACAGAAATAAACTCTGTTCTTTCCCAGTTCATCTTCATCTCGTTATTGGGCCACAAAAATATGCAGCCTGACCCTTGGTTTGGTCCGAGAACAATTCCACTATAAAATGTGGATTTATTATTGAATTATATCCTGTCTTTGAGGAGCAAGTAATAGGATTCACAATTCAATCTCCTGTACCCCATATATTAATTGGCTTACATGGCTGGAAGTCCATGTCAGACAAGGAAGGCTTTGCTTCAGGCCTAATCCAGTTTCATTGTTCTCTGACTTTGTCATCTGGCCCCTCTTCTGTGTGCTAGCTTCATCCAGAAGTTAGCCTCTTTCACAACAGTAAAATGCATACAGCAATTTCAGGCTTTCCACACACTAAGTTTCCCAGAGATGAGCAGAGTTTCTTTTTCTGTGGCTCATACGCTAAGATATTTCTTCCCAGAAGCTTCCAGCAAAACTCCCCTCGAGTCATATGTGTGTGAATAGAGTCATAAGCCAACCTCTGAATCAATCTTTGTATCAAAGTGATCAAAGTGGTGGAATTAACTCTGGATCAATGATGCCTCATCCTTGGAACTAGTAATGAAGTCAGTTTCTGATCAGCTTCCTTAACAGAAGTCAAACAAAAACCTACCAAAAATAGGTATCATTGTTATGAAAAGTGAAAATATTTTAGATTCTGAGTTTTCTTCTCACAAAAGATTATTCAAAACTAAGTTTAAGAGATATATAGTTTTAACAAGACACCAGAGTATGAGTGATATATTACAATATTAATGATATTTATAGAATAGCTAAGATTTAAAAATAATTGTAATTATATTGATATAGTGAGTTAGAAAATTATTAATAGCAATTACTCATCAAGGAAAGAGTTTGTTATTTTGAGGATTGTCGTCAAAGCTGAAGAACTACAATAAAACAAACAGAATTTTATCACATAACTTAGAAATAGTAAAACACACCCCAGAATATTAACTGAGATATTTCCTCATAACCAGTATGTTTGGAGTATAGCATATAAGAATAGATAATAAAAAATGTTCATTAAACAACAACCAAGAGGTTGAAACAATTTTGATTAATCTATTTATGTCATGGATTCTTTACAAAAAATTTCTTCTGGTTTGCCTCTTGCTTAAGCATTACAATTCTAGTATTACATCTTATTCTAAATAAATTATTATATATTTTAAACTGTTTTCAAAGATATGTATGCATGATAAAATTGTCTGACATTTTGAAAATTGGATTCTCTTGAAATTGAATGAATTGAACTGAATCAATTTGGTGATTTTTCTGAAGATTCTTGTTTTGGTTAATTATTGCTGCATAACATATTACCACAAATCATAATGGCTTAAAACAACAGCCATTTATTTTACTCATAAATTTGCAATTTGAGTAGAGCTTTGTTGGAATGATTCTTCCCTGCTCCTCATAGCATTATCAAAGGCTGCCCTCACAGGGGCTAGAAGACCCACTTTCAAAATAGTTCACTCACATGACTGAAGAGTATGTGGGACTTCAGCTGTGCTAGTGGGATTGGCACCCATGGCTGACTGGGCATCCTCAGAGCAGGAGCGTGGTGGGTGGGTTCCAAAAGCAAGCCTCACAAGAAAGCAAAGCAGAAGTGCATGGGAGTGTATGATCTAGCTTCAGAAGTCACAGAACATCAATTCTAGCATACTGCATACAACAAGGAAATTACAAAAGGCCACCTAGGCTTACAGCACCAAGACATGATGTAACCAGTTCCTAAGAAGCATATAAGATGAGAGATATTGCAGCACCCCCATGTGCAAAATACAACCCGAGTCAACCCCCAGCAATTACTTTCTTCTTCTTCCCTCTCTCTTCTCCCTTGCTCCTGCCATCTCTCTTTTATCTTTACTGTGTGGATTTATTTAACCAATTTATATGGTTTGGCTCTGTGTCCCCACCCAAATCTCACCTTGAATTGTAATAATCCCCACATGACATGGGAGGGAATGGGTAGGAGGTAATTGAATCATGGGGGTGAATTTTTTCTGTGCTGTTCTTATGATAGTGAATAAATCTTACAAGACCTGATGGTTTTATAAAGAGGAGTTTCCCCGCACATGCTCTCTTGACTGCTGCCATGTGAGATGTGACTTTGCTCCTCCTTTGCCTTCTGTCATGATTATGAGGCCTCCCCAGTCATGTGGAACTGTGAGTCAATTAAACCTCTTTCCTTTATAAATCACACAGTCTTGGGTATGTCTTTATTAGCAGCATGATCATGGACTAATACACCTACTATCTATTTATAGAAATGAAGTTGGAGAGCTACTGGTTGGGGAGATATGAAAGAAAGAATGTAATAAACAATCAATCCCACAATCCTGGTTATTAGCCACTCACTTCTCCTAATCCATACACTTACCCCAAACTTCTTGGTATCTTTCATGTTCCTGTGGTCATAGTTTAGGTTATCTGTTATTTCTTTGCATCCATATGCATTCATTTAGATACTATACAAATAAATACTGCAAAATATTTGGAAGCAGACAAATGGGTTTTAATCTTGGCTCTGCTATTTATTAACAATGTGTTTTTAGTCAGTGGCTTCATGCACCTCAATATATGTAAAATGGAGATAATGATGTATAGAGCTTCTGGGTGTATTAAAGAATTATATAGAAAATACTTAGCACGTAAGTGCCCAATAAATGGTAGCTATTCATAATCATTCATTCAAGCATGCATAAGACATTTTATATGTATATACACACACACACACACACATATATATATACATATAGAATTATAGAATTATAAATGAGCTATTGAGTTTGCATTTATGAACCTGCAGTTAATTAGGGGAGATGATCCTATAACAAATCTTTTCAGACTATTTGGGGAGATTAAAAAAGGGGGTATGCTCTGCATGAAGTATTTGCCTTTCAGGAACCAGAACTTTGAAATATACAGAGTCCAGATTTGATACGTAAATTCCTGAATTGGTTCATTAAGGGTAAGGAGAAGCAGAGCCATTTTTGCCTCCACACTTTGGTCTTGGACCCATGTATTCTTCTTTTCAGAAGCGCACCCTAAAACAATTTTAATTTGAATTTAACGTTTCTATGTGTGAAGATGCTGCGGCATTCTTAGGAGGTATTGCCTCTGAGCCGACACTTCAGCTGTCACTTTACAAGGCTGTTCCAGTGCACTTCTGATTAATGCAGGGTGCACTATGACCAGTGGATTCCTTAGCCATGGGCCCACTGTGCCCTTCCTTTGCCATGTGACACCTGTTGGTCTGTGTGGTATGATGTAGAATATCATGCATGTGAATCAGTTACACTGTAGGCCCTCAGAGAGTGAGACAGACTCAGACCCTGCAGGAAGGTAAGTCAAACCTCTTCCCAGAACATGTACCCATTCTATCAGCATGAACCACCAGAGGCCTGGGGAGAAGGAGTCCAGCGAGACTAATCTGCCATCTTTCTTTAACATGTGATGTCACTTTCCTTAACATAGTATGCCATACTGGAAGTGCAAAGCTGCTCTTTGTTGATGGCAGGCTTGACATTTGGTAGCGACACCAGCTGGACCAACCTAGAGAGGTGAGAGCCCATGCTGTCGGGCCTATGCATAACCTCCACCTAAGACCCTGTATTAGTCCATTTTAATGCTGCTGATAAAGACATACCTGAGACTGGGCAATTTACAAAAGAAAGAGGCTTAATTGGATTTACAGTTCCACATGGCTGGAGAGGCCTCACAATCATGGCAGAAGACAAGGAGGAATAAGTCACATCTTATGTGGATGGTGGCAGGCAAAAACAAACAAACAAACAAAGCTTGTGCAGGGAAATTCCACCTTATAAATCCATCAGATCTCATGAGACTTATTCACTATCACAAGAATAGTGACGTCAATGCCTGCCCCCATAATTCAATCACCTCCCATTGGGTCCCTCCCACAACATGTGGGAATTCAAGATGAGATTTGGGTGGGGTCACAGCCAAACCATATCAGACCCCATATGTGCTACTTCATTCCTGTGCTCATTGAGAAAGCAATGGAATGGCCAATAACAGAGGCTGGGTGACATGTTCTGGCTGAGTCATTTTGGTCTATGTGGTTGTGTTATGACTCCTCCGTGCCAACTGTTTTTTGGTGGTTACCATGAAATATTAATATCCTTATGCTTTGTGCTTACTCTCGTATGTCTAAACATGTGCCTCTCCTCTAGACCTTCTAAGCTAATATGGCTCTACTCTAGACCTCCTTAGCCCTCCAGGCTTCTAATCAGCTGGACAGGCTTTTAGCAGGTGGCGATTTGATATACATTCTAACCTCAGGCCATTTTTCATTGTATGCCAAGTGGAATACTACTTGAAGCTCTGCCCACAGGCGGGACTTTTTTCTAATCACTGTCTTTCAAGGTCACCCCTGAGGCGGACTGGGGTGCACCTGTCATCCATTTCTAAACTGCACCTGCATTCTATGATGATCCATCTGTGAACAAAGCTCCATGTTTCCCTCCTTTGGCTGCTGCCATAAGGGACCCCCATTGCAATTATAGGTTTGAACCCAGGGAGGGGCACTAATTCCTCAGTAGTAGATGATACAGGGTCTGGGCTACCTGGTTTTGAACGTTGTTTATGCTTGCAAGTCCTGCTTATGCCCATTTTCATCTTAAAAAGAATTGTTGCAAGGCCCTGCAACTGTATGACTGAGTGGGCCTGAGAAAATCCAGTTTATGATTGGCAGCTCTGATTATATGGTCACTTGATGTCCTGTAGTCATATATCTCTGTCTTTCCCAGGGTTCAATAGCATGCCAGGAACTATTTTGCAAAAGGTGTGTAATTTTTGACTGCAGATATGTTCTAGGTCAAAAAACCCTCCTGGTTGATACTGTGATTATTCTATTAGATTTTTCTATAAACTACATATGTTATCTCTTCTCATCACTGATAGCTTTAATAGCATAGAGTCATCTATACAGCCCCAGCAGCTGTCCAGACCTGCCACAGAGTACATCTGGGTCTGGGCTCCACTGAAAGCCGAAAGCTTTTAATGTCACCTAGTGTACAGGTTGGGACACTCTTAAAGGTGAAACATGCTTACTCCAAAACTCAAAGAAGTCTATCAAGCAGTGTGCTTTCATCTTTCATTGTGGGAAGTTGAAGATGCAATAATTTATCCTTTACTCTCCTTGGTCAAAACAGTCAGATTATCTGTTTCACCACGTATTCATGTTATTAAGAGATATCTTGGATTGTTAATGCTTTTATGGACTTCTTGACTAATTGCCTTCTGAAATTAACATAGTAAAATAGTAAATATGTATTTAAACAAAAATATATAAAGTTAAACTAACCTATAGGAGTTTCTTTATAAAATTATAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACCACTTTCAGTTTCTTAAACTCAGTGTATAACTAATAAACTTAATGTGTATTATTGGTTCTTCTCATTGACATGATAACAGGAAAGCAAAGAGAATTTTGAAGTTGATCAGCTTTGAGGGATATTAAATATTTGCATTTTGAAATTAAACAATGAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACATTGCTGATGATAAATGGTGGAAAATAAAGTTGGAAATACTGTTTCAAATTGTATCTTCTAGGGATTAAGAAAAAACTTGATTGCTTAAAATGAACTTGATTGATGAACAAGATGAAATATTTAAATAATCTGGTATAAATATAATCATGTGTGAAATTTATTGGTGGTTAATGTAAATACTAAAATTTCTAGTAAAAAAAGAAAAAGAATAGAGTCAAGACGTTTGCAAGTCCAGTCTACTGAGTTTATGCCACAACTAAGCAGAAATGGAATTCTGAAATCAGAGTTGTTATCTAACACTGGGAAAGATATGAGAATAATTTCATGTGACAGAATAATTTGTTCTATATTGCAGTTAAAGAAAATGATAAAAGCCGTTTAATTCATTTGACAAAGAGATTTTGAAAGGTTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTGTAATTGTCCACTGTATTTGCATACCAACGCGAGAAAACAGTAATAACTTTCAAGTTAAATAATTCAAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTCAGAATCAGTTACAACGTCTTTGCTGCTTTTTCCCATTTTCTTTTTTTTCTTTTTTTTTTTTTTAAGACAGGTCTCACTCTTGCCGGGGCTGGAGTGCAGTGGCATGAACATGGATCACTGCAGCCTTGACTTCCTGAGCCTCAAGCGATTCTCCCATCTTAGCATCCCAAGTAGCTGGGAGTGATACCATGCCCAGCTAATTAAAACAAAACAAAACAAAAAAATTTTGTAGGCCGGGCACGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAACTCTACTAAAAATACAAAAAATTAGCCAGGTGTGGTTGCGCGGACCTGAAGTCCCAGCTACTCAGGAGGCCGAGGCAGGAGAATGGCGTAAGCCCTGGAGGCGAAGCTTGCAGTGAGCCAAGATTGCGCCCCTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTTGTCTCAAAAAAAAAAAAAAAAAAAAAAATATGCAGGGTTGGGGGTCTCGCCATTTGGTCCAGGCTGGTCTCAAGCTCCTGGGCTCAAGCTATCTTCCCATCCTGGTCTCCCAAAGTTTTGGGATAACAGGTGTGAGCCACTGGACCTTGCCTTTGCCTTTTTTCTTCAAATGAAAGTACTATTGTATTTTAGCAGACTACTAGTGTCTTCTTCCTCCTCCTCTTCTTCAACCTTCTTCTCTTTCTTCTAAAGTGTCCCTAGATGTACATAAGACTAATGAAAATCCTTATTCTGTGATACACTGTCATTACAAATCTATGCAAGATCTCCTTTCCTTTCTTCCTTCTTCCCTCTCTCTCTCTGTCTCATTCTCTCCTTTTCTCTTTTTCTTTCTTTTGTTCCTTCTTTCTTTTTTAAAATTAATGTGATGAACATCTGTAGCCCACGACCTCATCCAGCACTAGCATATTAACATAAGCTTATCTCTTGATATCTTCCCTTTTCCCATTCTCCTTACACCTTCAACTTTTGAAGAGCAAAGAGAAGAAAGGTAAATATAAAACACTAAATTTGAAAAAATAATATCAGAAGAGTAGGTTTAGGAGGTGAAAAATGAGAGCAAGATGGGGTAGATGAAGAGAAGAAGTGAGATAGAATCAAAACAGATAGAAAGGGATGGCGGGGAAATATAAGAAGGTAGATAAAGAAGTGCTTCTTCATATTCATATTTCTCTAGCAGCAATAATTTATTAGAATGAAGCTAAGAAGGATGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCCAGCTGAAAAAGTACTGCTCTTATCACTTCCAAATTTTTAGACCTCATGGGAGGGATTATTTTGACTGTGCGATTAGCTAATGTGAAAATAATTAATGAAAGAGAAGAGTTTAAAGCAAACTTTCCCTGAAGGCCAGTTTGATATTTACTAGGTTAAACAGAAACTGATGATGCCTTTTAAGGGAATTCTTAACTTGAACTTTCTTTGGGACAAAATTTACTCATGAAGTAACATTTTGTAGTTCTCAGCTAGGGTGAAAGATAATTTAAACTTAAAATAAATTTATCTGTATTCATCAATATTGAATGAAGTAGAGAGAAAAGTATGCCTCTTTTCCTCAATTATTCCTTATCGACAATTAATAATGCATGTTGAAAATCTATTCCTTGGTGCTGTCATGGAGTTGATTGGCATTCTTTACTTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTTGGCTTGCTCTTAGTCTTGTAATAAACAAAAGAACGTACTTATTTGGTCCATTGTGTATTTCCCTCCCCTAAAATGAAGACAGAAATTCTTATCTGATTGCTAATATACCCCAAACACTTTTCATTTTGTGTCACCCATATCAGGTGCTGCCCACATATTTGTAAAATGAGTGAATGAATTGCATTGAGCTATCACATATATTTCCACTTTAACAAAATCTAATATTGTAATAAAATAATTTCCTTACACTCCTTCAGGCAAGAAACATTGTTCTCAACTTTGCTTTAAATACTAAATTTTTACAATCTTGTATTACCTATCACTCAGAAAACAATTTGATATAAAACTTATTTGGCAACATAATACTCAAATTAGAATAGTCATTAAATAGATCTTATTGTCTTAACACTGAAAGGCTTAACCAGATAAATTCATCATAGTGTTCTCTTTAGTTTTAGTGAAGGAACAAACAAAAGGCATATATATATATATTTTTTTATATATTATACATATTTTACATTAATATATAATTTATTATATACTAATTTTATAAAATTTAATTATATAAATATATATTTTTATTAATTATATATAAATATATTTATTATACATTATAGTTATATCATATTTATAATTATATTATATTTATATTATATAATATATAAATATTACATTTATATATGAATTAATTATATAAATATATAAAATATTTATATAAACATACACAAATATATAAAAATATATACACATACACAAATATATACAAACATTTATATACACATACACAAATATATACAAACATTTATATACGCATACACAAATATATAAAAATATTTATATACGCATACACAAATATATAAAAATATTTACATACGCATACACAAATATATAAAAATATTTACATACGCATACACAAATATATACAAATATTTACATAGCATACACAAATATATACAAATATTTACGTACGCATACACAAATACATAAAAATATTTACGTACGCATATACAAATATATAACAATATTTACGTACGCATATAAAAATATATAACAATATTTATGTACGCATATACAAATATATAACAATATTTATGTACGCATATACAAATATATAACAATATTTATGTACGCATATACCAATATATAACAATATTAATGTACGCATATATAAATATATAACAATATTTATGTACACATATATACATATATAATATATAAAAATATTTATATAATTATATATACATATATAAATCTATAAAAATATATATACATATATAAATCTATAAATATATATACATATATGAATCTATAAAAATATTCATATATACATATATGAATCTATAAAAATATTCATGTATACATATATGAATCTATAAAAATATTCATGTATACATATATGAATCTATAAAAATATTCATGTATACATATATGAATCTATGAAAATATTCATGTATACATATATAAATCTATGAAAATATTCATATATACATATATACATATATAAAAATATTTATATATACATATATACATATATAAAAGTATTTATATAGACATATATAAAAATATTTATATATACATATATAAAAATATTTATATATACATATATAAAAATATTTATATAGACATATATACATATATAAAAATATTTATATATACATATATAAAAATATTTATATAGACATATATACATATATAAAAATATTTATATAGACATATAAATATATAAAAATATTTATATAGACATATAAATATGTGAAAATATTTATATAGACATATAAATATGTGAAAATATTTATATAGACATATATAAATATGTGAAAATATTTATATAGACATATATAAATATGTGAAAATATTTATATAGACATATATAAATATGTGAAAATATTTATATAGACTTATATATACACATATAACTATATAAAAATATTTACATGGACTTATATATACACATATATATAAAAATATTTATATAGACTTATATATACACATATATAAATATATATAAATATTTATATAGACTTATATATACACATATATAAATATATAAAAATATTTATATACACACATGTAAATATATAAAAATATTTATATACACACATGTAAATATATAAAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACATATAAATATATATAAATATTTATATATACATATAAATATATATAAATATTTATATATACATATAAATATATATAAATATTTATATATACATATATAAATTATATATAAATATTTATATATACATATATAAATTATATATAAATATTTATATATACATATATAAATTATATATAAATATTTATATATACATATATAAATTATATATAAATTTTATAAAATTTAATAAATATATATTGAATATATTTTAAATATATAATATATTTATAATAAATTTATATTTAAATATATATTATACCAATACTTTCTATGTATACTTTGAATATATATTATATATAATATATTATATATAATATATTATATATAATATATTATATATAATATATTATATATAATATATAGTATTTATAATATATTATATAGAATATATATAATACATAATATATAAATATTAAATATATTTAATATATATATTAAAAGTACACATAGAAAGTCTTACACAGCCAACAATAAATGACTGTATATGTACTTCCTCACCAAAAAGAAACATTTTCTTAAATTTATTCAATTAAGATTTCTTAATATCTGTACAAATAATGTATCAGGTGGCAACACATAATTAAATATAAAATTACCTATTTTATCTAATTATTTATAAATTTAAGCTTTTTTACCTATTACATTCCAGATGCTATTTCATTTGTCTTACAATCTATGCTTGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGAAATATTTGAAAAATAATTGCTTCCTACTGTGCATGATGAAATTCTTAGAGAGAGATAGATGGGAGAGTTGATGAGGAAAGAGAGGGGAGAATGGAGAAGAGAGAGAAAAGGCAGGGGGACATATTTTAGAGTAATAGAGTCATATAAATGACATTAGCATTACTAATTTTAAAGTGAAAAATGGATACATGTTCACAACCCTTGTCCAAAACCCTTGGGTCCAGATGTATTTCAAAAGTGCAAATATTTCACACATTAAGAAATTAATCCAGTGCATATACTGCAAGTTTTGGAACAACCCAGTGAAGTCTCAGGTAGTCCCCTGTAATCAAGCACCTTAATATACCTGCAACAAAATTCGTGTGATGACTCTTTTCAGTGGGGTCAATAGTCTATAATATATCGTAAGTACAAATAAGTGTATTGTGCATATGCTAATTAAAAGTACAGACTTCATTAAACTTCTGTTATATAACAAAAATTATAAATGGTTTCTTTTTATCTCTATGGGTGTATATTGTTTTATAAAAACATGGATTGTAATTAAATGGTTCCTCAAAGTTTATTCAATTAATTGAAGACAGAATTACACATTAAAATTTGGAATGAATTGAACTATATAGAGTTATGAAAAAGTTAAAGACTCACAAGAATCTTAGAAACTATTTGGGGAGACTCGATGTATACATACAGAACAGTTTAAAAGTAACAAGATATTATGGAAATAACTGGAAAATAATATAAATAGTAATTTTTTCACAGAGGTTGATAGGAGTGATTACCATAGAACAATAAGGAAAATGTAAAAATTGAACTGGATATTTGGGAAATAAATGGGGAGGTGTTAAGACCAAGACAAAGGGACCATTTGGCTGAGTCAAGGTGTCACACAGAGGAAGAACCAGGACATTTCATTCCAGGTATGTGTATGCTACTACTTGGACATAGCTATGTCCAAAAAAAAAAAAAAAAAATCCTGACAAAATAAAATTACCTGTGTATTTTTTTGGTACAATAATGTATAAGAAAGACATCTTTATTTCATACTAACTTACCACATTGCAGCCAGTTTTTGCTTCTCACAAAATTCATTTTGAACTTTTTTTCTTTAAGGAAGTTGCTACGTTTGTAATTACCAAACACCCAGTTACCAAGTTTATCATTCCTCTTTCCCTTGAACCAAATGTATTATTAGTTAATAAAGCCTTTGTATAATGAATCACAACACAAACCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTCGAATATTCATATTCTCCAGGAATGAGCAGAGTAAAGTGCTTTTATTTTTAAATAAGCACATAGGTTATGATTGCACATGGTTTACCTAACGGATGTTGCCGAATCCCGTAACATGTTACCCCAGGCTTCCCAACACATGCCTGATCCTTTAGTAGCTCATACCCAGGAGTAATGGTCAACGTGCAATTGGAATAGGTTTATAAATTAGTATATATGTATATATATATTGTATAAAAATAAAGATATTGCACCTATTTTTAAACTTCTTACCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTGAATCATTGATTGATTTTTTTTAATTGTTCATGTAATCTTTTGTATGGCATGACTGTCACAAGTGAAAGATTATCCTTTCTCAGGTAGGAGATGATATACATAAACTCGTTAACATTTTCTAAAGACTTTGCCATTACATTAATAATGATTAGAAAACAAAATTTCAATTTGGAGAATAATTCTCTTATGATCTATGAAAAAAATATATTTTTATTATGCTAAACTATCTCATATTCTTCAAAAATACCAGCAATAAAATTCAAAATAGTGTGTATAACGTGTGTAAACATATTTACAAGTACTTGATATATCTTATTTATCAAGTCAAAAAAGTCACACTTGGGAGTATCATTTTTAATTAGTTGCTTTAATTTCAACATTTTTTGTTTATATTTATCCACAGAATTTCGGAGACATTATTTTGTTATTTTTAGGACTAAATGCATATTAAAATAAATAAAATGAAAGATCCTAAATATTTATTATGATTTACATGTTTGTCATCAGGCAGTAAAGGCATTTTTATTTAATATTATTTTTATTTATTTCTTCTTCTAATAATTTTTTTAAGAAAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAACTTGGCTCACTGCAACCTCCGCCTCCCAGATTCAATGAATTCTCATGCCTCAGCCCCCCGAGTAGCTGGGATTACAGATTTGCACCATCATGCCCCGGCTAATTTTTGTATTTTTCGTAGAGACGGGGTTTCACTATGTCTGGTCTCCAATGCCCGACCTCAGGTAATCCACTGGCCTCAGCCTCCCAAACTGCTGGAATTACAGGCATGAGCCACCGCGCTCTGCCTATTTTTACTTAATAATAGACAATCTAAAAGCTTTTAACTTCAGAATTTTTCTTTTGCTATTTTTCAAGTAAAACATATTTCACCATTTTCATATCTTCCACTTTTCTTTCTGGTTTTCTGTAAGTAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTTATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAAATAGATAATTGACTGTTTTAGAATAAAAGTTGTTAAAACAATTTCTAATATATATATTTATGTATGTATATATACCATATATATCACATATATATTTTAAAAATATATATTTACATATGTATGTATATATGTAATTATATAGGTATTTGTATATGTATTATATATGTATGATACACACACACACGTGTGTGTGTGTTTCCCCAAAGTTTATCATTCTGATTTCACATTTTCTAATGAAATACAAGGTCAAAATGTGTTTTCAAACTGTTTTTTTAATCTCTTCATTACATAATTTCCTTTGAGTTATAATTTTTAACTTTCTATTTCAGTTCTTAACTCTTCAGATTTATTATTTAATCCTCTCATATTACTTGATGTATTTTAGAAAAACACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTTCTTTTATCGAATGATCTATAGTTAATTGAGAACATCATGGAAAGTAGTACTCTGTTAAAAAAAACAAAATTTTTTAATGTTGGCTAAAACTAAAAACTTGCTTTTAGCTGGGCAAAGTGGCTCGTGTCTGCAATCCCAGCTACTTGAGAGGCTGAGCCAGGAGGATTGCTTGAGGCCAGGAATTTGAGACCAGCCTGGGGAGACACCCCCCGACCACGTCTCTAAAATAAGAAAAATTAACTGGGTACGGTGGTTTGTGCCTGTTGTGCCAGTCGACTACAATGAGAGGATCATTTGGGCCCAGGAGCTGTGAAGGCCACTGCACTCTGCAGAGTGTTTTGTTTTGTTTTGTTTTGTTTTCAGAGATAGAGTGAGACCTTGTCTCTAAAAATAAATAAATAAATAAATAATTTAAAAATTAGCTTTTGTCATGATATCAGCACCATCTATACAAAATCTAATATGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAACAATAGAGATTCATCTTATTTTGGTAATTTTCTATTTTGATCACAAAAGTTAATAAAAATGTGCACAATTTCTGTCCTTTTATAAATTCAAAAGATTTATTTCTGTGACACATTAAAGAAATGTCAATGATATTATCCAAACTTTGTTGTCTTGTTTGTTCTTCATGTTAGTTTTTGATATTCTACTAGAATTGTTGAATTTATGAGTATTATAAAAATCACAACAGTTTATCAGAATAAAATGTTCTGGCTGAGTATAGTGGCTCATTCCTATATTCCAGTGCTTTGGCAGGCTTGAGGCCAAGAGTTTGAGACCAGACTGAACAACACAGTGAGACCTTGTCTCTACAAAATATTTTAAAAATTAGTGGTGTGGTGGAGCATACCTATAGTACCAGCTACTCGGGAGGCTGAGGCGGGAAGATCACTTGACCCCAGAAGTTGAGGACTGAAGTGAGCTCCGATCACACCACTGCACTCCAGCCTGAGCAATAGAGCTAGACCCTGTCTCAAAAAAAAGAAAGAAAGAGAGGAAAAATGTAAAATTCCAATAATTGAAAAGGGGCAGCAATGACCTCTTTTGTGAATAGCAAACCCTGAGGAATCTCCTTAAGCACAGTTTTTCTACAGAATGAGAACCAAAGCAACACTGCCCAAAATGATACAGACAAACATTCCTGTGGTGTGGGTGTGGCAGAAGAACCTTTATCATGCTTACCGTGCCATCCTACATCTGTTACATTAAACTAAAGTGTTCATATGAGAACTTAGGTTGTCATTTATTTTTGTTTACTATAGGTTAATACTATCATATTTAAGCATAGGCACGGATTTATTTTGGCATTTTAACAGTCGAAAACACCATGTCAGTGGGTACTAACTCTGTTCATAAATTATTTCCATACAGGAGAGAAGGGTATAAAGCTCGGAGATGGCTTGACAACGGGCTTAGGATAGGGTTACAATGCCTCTTTTACTCATTGAAGTGGTAACCTAAAAAGAAAGAAAGGAATGTACATAGAGCAGTTTGTTTTCTGGCAAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAACTGTCAAAATGTGCCTGGCATTAAAATGGCTGTGTCGCAACATCATCTACCCATAGGAAGTGTTAAGAGATAAGATCCAACAGGTAGATCAGAGCCAAATAGCATCTGTCTATGGAGTACACTATAATTAATTCTATAGGATAAAAGTAATTACTGGGATTTTGTCAGGGGGGCACTATAGTGGAAGTGGTGTTTCGGAAAGATTAATTTAATCCATACCAGGATAGTTTAGAGTGTGTAGATTATAAAGTAAAAGGTCAGTTAATAACCTGTTATCATTATCTAGGATTAAAATAAATGTCATAGAGGGAGCAGACAATGGAAATGAGAAGAGCTATATTCAAACATTGAAAATACAGGATCAAGACAATTACTATACAATAGAGATGACAACAGCAAGGAATAGTAAACAGAACATTCAGGTTTGCTTTTGCTCATATGAATATAAATTCAAATCTAGGCAACCCAGAGCTGATGCAGTTGCTTAAAGTTACTCTCAGGGACTTGGGTTCAATCTGCTTTCCAGACAGGAATGGGGGAAAGGGGAAAGAGTTAGAACAAGCAGCATTGGTCCCGTTTATCAAGAAAGGAAAATAATTACACTAAATTGTTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10834:HG2_PB_SVrefine2Falcon1plusDovetail_5261:HG2_PB_SVrefine2PBcRplusDovetail_4824:HG4_PB_SVrefine2PBcRDovetail_8756:HG3_Ill_SVrefine2DISCOVARDovetail_12461:HG2_PB_SVrefine2PB10Xhap12_12708:HG3_PB_SVrefine2Falcon1Dovetail_10817:HG4_Ill_SVrefine2DISCOVARDovetail_12229;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_8756;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0141989;ClusterMaxSizeDiff=0.0141989;ClusterMaxEditDist=0.0155549;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=20466;DistBack=-477565;DistForward=2;DistMin=-477565;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=18:65121218-65121222;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.9963;PctRecOverlap=0.9963;SizeDiff=75;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=2438.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:113:1/1:0:26:0:19:1/1:0:9:0:13:1/1:0:37:1/1:0:569:.:20122:.
chr18	65349551	HG2_Ill_svaba_21609	C	CATACCTACAACCAACTGATCCCCAAAAAAGTTGACCAAAAAAAAAAACAAAAAAAAAAAAAAAAACAACAT	20	PASS	ClusterIDs=HG3_PB_HySA_26375:HG4_PB_pbsv_17401:HG3_PB_pbsv_17166:HG2_PB_PB10Xdip_14262:HG2_Ill_GATKHC_27692:HG2_Ill_GATKHCSBGrefine_11500:HG4_Ill_GATKHC_27641:HG4_PB_assemblyticsfalcon_11550:HG2_PB_assemblyticsfalcon_11748:HG3_Ill_Spiral_17879:HG2_PB_assemblyticsPBcR_11377:HG4_Ill_svaba_21539:HG3_Ill_svaba_21819:HG2_Ill_svaba_21609:HG2_PB_pbsv_17497:HG2_PB_HySA_31863;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_svaba_21609:HG3_Ill_svaba_21819:HG4_Ill_svaba_21539;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0821918;ClusterMaxEditDist=0.187919;PBcalls=9;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=18:65349550-65349553;PctSeqSimilarity=0.9726;PctSizeSimilarity=0.9726;PctRecOverlap=0.9726;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:1:28:1:25:1/1:1:21:0:20:1/1:0:9:./.:.:.:.:.:.
chr18	65877216	HG2_PB_SVrefine2Falcon1plusDovetail_5264	G	GATATATAAAATATATATATAAATATATATATTTATATATATATATTTATATATATTTATATATATATATTTATATATATATATTTATATATATTTATATATATATATTTATATATATATTTATATGTATATTTATATATATATTTATATGTATATTTATATGTATATTTATATATATATTTATATGTATATTTATATGTATATTATATATATATTTATATATATATTTATATATATATTTATATATAATATTATATATATATTTATATATATATATTATATATATATTTATATATATATATTATATTATTTATATATAATTTATATATATATATATATATTTATTATATTTATTATATATATATTTATATATATATTAATATATATATTTATATATTATTTATATATATATTTATATATATATTTATATTATTTATTATATATATTTATATATATATTTATATATATATTTATATATATATTTATATATATATTATTATATATATATTTATATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATATTATATATATTATATATATTTATATATATATTTATATATATATTTATGTATATATTTATGTATATATTTATATATATCTTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATTATATATATATTTATATATATTTATATATATATTTATGTATATATTTATATATATTTATATATATTTATATATATATATATGTATATATTTATATATATATTTATATATTATTTATATATATTTATATATATTTATATATATATTTATATATATATTATATATATTATATAATTTTATATAATATTTATATATATTATATATATATTATATATATTATTTATATATATATTTATATATATATATATATATTTTTATATATATATTTATATATATATTTATATATATATTTATATATATATTTATATATATTTATAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5264:HG2_PB_pbsv_17502:HG3_PB_pbsv_17170:HG2_PB_SVrefine2PBcRplusDovetail_4826:HG4_PB_pbsv_17405:HG3_PB_SVrefine2Falcon1Dovetail_10820:HG2_PB_SVrefine2PB10Xhap12_12711:HG4_PB_SVrefine2Falcon1Dovetail_10837:HG4_PB_SVrefine2PBcRDovetail_8758:HG3_PB_SVrefine2PBcRDovetail_8501;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5264;NumExactMatchSVs=1;ClusterMaxShiftDist=0.293153;ClusterMaxSizeDiff=0.293153;ClusterMaxEditDist=0.294118;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1009;DistBack=4977;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=407;REFWIDENED=18:65877217-65877623;PctSeqSimilarity=0.9567;PctSizeSimilarity=0.9777;PctRecOverlap=0.6583;SizeDiff=-23;StartDistance=-341;EndDistance=-341;GTMatch=1;TruScore=86;MatchId=2440.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:1:20:1:15:./.:0:2:0:1:1/1:0:19:0/1:21:47:.:1039:.
chr18	66399161	HG4_Ill_GATKHCSBGrefine_11865	T	TAAAACTGAACACATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_17409:HG3_PB_pbsv_17178:HG4_PB_assemblyticsfalcon_11565:HG2_PB_assemblyticsPBcR_11392:HG2_PB_assemblyticsfalcon_11761:HG2_Ill_MetaSV_2178:HG2_PB_pbsv_17506:HG2_Ill_breakscan11_4798:HG2_10X_SVrefine210Xhap12_12152:HG4_PB_SVrefine2PBcRDovetail_8761:HG4_PB_SVrefine2Falcon1Dovetail_10842:HG4_Ill_MetaSV_2244:HG4_Ill_GATKHCSBGrefine_11865:HG3_PB_SVrefine2PBcRDovetail_8506:HG3_PB_SVrefine2Falcon1Dovetail_10824:HG2_PB_SVrefine2PBcRplusDovetail_4830:HG2_PB_SVrefine2PB10Xhap12_12716:HG2_Ill_GATKHCSBGrefine_11506:HG3_Ill_MetaSV_2315:HG3_Ill_GATKHCSBGrefine_11413:HG2_PB_SVrefine2Falcon1plusDovetail_5268:HG4_PB_HySA_25451:HG2_PB_HySA_31877:HG2_PB_PB10Xdip_14269:HG3_PB_HySA_26393;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11506:HG2_PB_SVrefine2PB10Xhap12_12716:HG2_PB_SVrefine2PBcRplusDovetail_4830:HG3_PB_SVrefine2Falcon1Dovetail_10824:HG3_PB_SVrefine2PBcRDovetail_8506:HG4_Ill_GATKHCSBGrefine_11865:HG4_Ill_MetaSV_2244:HG4_PB_SVrefine2Falcon1Dovetail_10842:HG4_PB_SVrefine2PBcRDovetail_8761;NumExactMatchSVs=9;ClusterMaxShiftDist=0.16875;ClusterMaxSizeDiff=0.16875;ClusterMaxEditDist=0.247227;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=317;DistBack=70446;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=18:66399162-66399175;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:0:20:1:16:./.:0:5:0:1:1/1:0:19:1/1:1:74:.:.:.
chr18	66572493	HG2_Ill_MetaSV_2179	T	TGAAATTATTTTTTTTTATTTTTATTTTTATTTATTTATTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGACGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGTCTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_31880:HG4_PB_HySA_25452:HG2_PB_HySA_31881:HG3_PB_pbsv_17180:HG2_PB_pbsv_17508:HG4_PB_pbsv_17410:HG4_PB_SVrefine2Falcon1Dovetail_10843:HG4_PB_assemblyticsfalcon_11567:HG2_PB_assemblyticsPBcR_11394:HG2_PB_assemblyticsfalcon_11764:HG4_PB_SVrefine2PBcRDovetail_8762:HG4_Ill_manta_3985:HG3_Ill_SVrefine2DISCOVARDovetail_12471:HG3_Ill_MetaSV_2316:HG2_Ill_SVrefine2DISCOVARplusDovetail_5685:HG2_Ill_MetaSV_2179:HG4_Ill_SVrefine2DISCOVARDovetail_12235:HG4_Ill_MetaSV_2245:HG2_PB_SVrefine2PBcRplusDovetail_4832:HG2_PB_SVrefine2PB10Xhap12_12718:HG2_10X_SVrefine210Xhap12_12154:HG3_PB_SVrefine2Falcon1Dovetail_10826:HG2_PB_SVrefine2Falcon1plusDovetail_5269:HG2_PB_PB10Xdip_14271;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_MetaSV_2179:HG2_Ill_SVrefine2DISCOVARplusDovetail_5685:HG3_Ill_MetaSV_2316:HG3_Ill_SVrefine2DISCOVARDovetail_12471:HG4_Ill_manta_3985:HG4_PB_SVrefine2PBcRDovetail_8762;NumExactMatchSVs=6;ClusterMaxShiftDist=0.156156;ClusterMaxSizeDiff=0.156156;ClusterMaxEditDist=0.226244;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=333;DistBack=26140;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=18:66572494-66572511;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:75:1/1:3:25:0:16:1/1:0:5:0:15:1/1:0:36:1/1:3:49:.:.:.
chr18	67279635	HG3_Ill_Krunchall_23062	T	TTGTGTGCGAGGGCGCATGTGTGCGAGGGCGCATGTGTGCGAGGGCGCATGTGTGCGAGGGCGCATGTGTGCGAGGGCGCATGTGTGCGAGGGCGCA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23127:HG3_PB_HySA_26403:HG3_Ill_Krunchall_23062:HG2_PB_pbsv_17509:HG3_Ill_250bpfermikitraw_22465:HG3_PB_pbsv_17182:HG2_Ill_Krunchall_23469;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23127:HG3_Ill_Krunchall_23062:HG3_Ill_250bpfermikitraw_22465:HG2_Ill_Krunchall_23469;NumExactMatchSVs=4;ClusterMaxShiftDist=0.201058;ClusterMaxSizeDiff=0.201058;ClusterMaxEditDist=0.31746;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=96;DistBack=-1;DistForward=64;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=18:67279636-67279704;PctSeqSimilarity=0.9935;PctSizeSimilarity=0.9796;PctRecOverlap=0.4141;SizeDiff=-2;StartDistance=-57;EndDistance=-57;GTMatch=0;TruScore=79;MatchId=2443.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:./.:10:16:21:6:1|0:0:15:18:0:0/1:17:8:./.:.:.:.:.:.
chr18	67561657	HG2_PB_SVrefine2Falcon1plusDovetail_5271	A	AGGGAGGGAGGGAGGAGGGAGGGAGGGAGGGAGGGAAGGGAGGGGAGGGGAGGGAGGGAAGGGAAGGGAGAAGAAGGGAAGGGAGGGGAGGGGAGAGAAAGGAGGGGAGGGAGGGGAGAGAAAGGAGGGAGGGGAGGGGAGGGGAGGGAGGAGGGAGGGAGGAGGGGAGGAGGAAGGGAGGGAAGGGAGGGAAGGAGGGAGGGGAGGGGAGGGGAGGGAGCAGATGGGGGCAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8766:HG3_PB_SVrefine2Falcon1Dovetail_10828:HG2_PB_PB10Xdip_14274:HG2_PB_pbsv_17513:HG4_PB_SVrefine2Falcon1Dovetail_10846:HG3_PB_SVrefine2PBcRDovetail_8509:HG2_PB_SVrefine2Falcon1plusDovetail_5271:HG2_PB_SVrefine2PB10Xhap12_12721:HG3_PB_pbsv_17186:HG2_PB_SVrefine2PBcRplusDovetail_4834:HG4_PB_pbsv_17414;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5271;NumExactMatchSVs=1;ClusterMaxShiftDist=0.197425;ClusterMaxSizeDiff=0.197425;ClusterMaxEditDist=0.312115;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=232;DistBack=16279;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=241;REFWIDENED=18:67561658-67561898;PctSeqSimilarity=0.912;PctSizeSimilarity=0.9027;PctRecOverlap=0.428;SizeDiff=-25;StartDistance=-135;EndDistance=-135;GTMatch=0;TruScore=74;MatchId=2444.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:37:1/1:1:13:0:18:./.:1:0:0:0:./.:0:0:./.:.:.:.:.:.
chr18	68132343	HG2_PB_pbsv_17517	G	GTGCCGTGGTGCTCAGTGTTGAGCTGCAGGAAGCTGAAGTTTGTACGCAGCCTGTCGTGCAAGAGCTGAGGCTGTGACGAGAAGAAGCCAGCAGCGAACGGGACCGCAAGGGCCCTCGGAGCAGCAGGGCGGGGGTCGGGGAGCCCTGCCAGCGCCGCGTTTGGCAGAATCAAGCTTCTGATTGGCCTCGCAGGGCAGAGCGCACACTCTGCACTGTTCGGCCTCCCTAGAGGCCATGGGAAAAGCAGCTAGTTTTAGGATTGGGGAAGGAAGGCACCAGGCGCATGCGGGAGGGCGAGAGGGAGGTGGAGGCTGCCGGAGTAATGAGCGGCGAAGAGCTCGTGAGCGGGGTGCAGGGCGAGTGCAAGCGGGGGTGCAGCGCGGGTGCAGGGCGGGTGCAGCGCGGGTGCAGGGCTGATCTGGGTGGGTGCAGGGGGGGTGCAGCGGGGGTGCAGCGCGGGTTGCAGGGCTGATGCAGGGTGGTGCAGTGCGGGGCAGGGCGGGTGCAGCGCCGGGTGCAGAGCCGGTGCAACGCGGGTGCAGGGTGATGCAGGGTGGGGTGCAGTGGCGTGTGCAGGGCAGGTGCAGCGTGGGTGCAGGTTGCGGGTGCAGCGGGGGGGTGCAGCGGCGGTGGCGGGCTGATGCAAGTGTGGGTGGCAGCGGCCTGGCCACCTCCTGCTCGCCAGGGCGTCAGAGGGATTGCTGAAGTCCGCTCTGGCAGCAATCAGGTGTGCTCTTGTTCAACAGGGGCTGCAATCGCCCCACACTGTCCCTCCTGCCGCCCGGCTCCTCCTGGAGCCCTGACCAGGGAGAATCAGCAAGTCTCCTTTTGATTTACTGCCTCTTCCTCCATCCTGGCATCCAGGAGGGGCGGAGTGAGCAGTGGGTGAGCTCTCAAGAGTGGGCCTGGAGATGCAAAGGCGGGCAGATGGGCCGGCGGGGCAGATTTCACATGAATAGATTTTACTTTGCATGCGGAGTGAGTGCACGAATGGCCAATTGATTCTTAAAATATTTTGAAGGGACTGGTATTTACCAAAGGTGTAGGACTGACCACAAACATCGGGATTTAGTTACCGATAGCTAGACCATGTTTAAACAGGAAATTGGTAACATTCCTACTTCCTGATATTACTTTAACTAGGGATGTCTTCCATAAAAAACAAACAAATAAGCATTGGATTTTTCCGATTACAAAAGGCATACATGCTTATTACTGAGTATTTGAAAACACAGATGAAATATAACGCAAGCAAAAGCAAAAGTCAATTCCAATAGTCCATGAAAGAGAGGTAAAACTGTTAATATGTTTAGAAGTATTCTCTCTATTATTTTTTGGAACACATATTTATACTTAATATAATATTGAGATATAGGCACATATTGAGATTTTTAGATTCTGATTTTTCATTAAACAATTTTATTAAAATAATGATTTAGAGGCTGGGAGCGGTGTGGCTTCATGCCTGTAATCCAAGCACTTTGGGAGGGAGACGAGGCAGGTGGAGCACTGAGGTTAGGAGTTGGATACTAGCCTGGCCATAAATGGCAAACGCTCATTATCTAAAAATACAAAAATTAGCTGGGCACTGTGAGCAATACACGTTGTAATCCCAGCTACTTGGGAGGCTGAGCAGGAGAATCACTTGAACCCGAGGCAGAGGTTGTAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTGGGCAACAGAGCAAAGGACTGCTGCCTCACAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATGAATAGTATATATATATAATTTACAGCACCAACATATCCCAATCGTAATGTACAATTCCAATTATTTTTTTAGTATGGTTTTGTTTAAACTTGGTGCCAAACATCACCACAATCCAGTTTGGGACAAGTTCCGCTCCTCAAGTGTAACCTCCTGCCATTGCAACCACACTCAGCCTAGAATAACCAACTGATGTGCTTTTAGTTGTCTACAAATTTGCGCCTTTTTTGGACATTTTAGATCAAATGTAAGCTTTGTGGTCTGGCTTCATTTGCTAGCTTGTTTTTGAGAATTCATCATGTTGTAGCGTGGATCGTGTAGTTTATTTTTATTTTTATTTTATTTATTATTTATTTTATTTTTTGAGACAGAGTCTCACTCTGTTGCCCAGGCTGGAGGTGAAGTAGTAAGATGAGGATCTGCTGGCAGGCCTCCTACCTGTCCTGGGCTCAGTGATCCTCCACCTCAGCCTCCAAGCAGTTGAATTACAGGCATGCGCACACCAGGCCTGGCTCAATTTTAAATTTTTGTAGGGAATGGTTTTTTCCTTATGTTGGCCCTAGGCTGGTCTTGAACTCCCTGGGCTCAAGCGATTCCTCCTGTCCTTGACCTCTCAAAGTGTTTGGATTACCAGACATGAGTCACAGTGCTTTTGTCCTCATTTTTATTGCAGAATAAGTATTCCATCTGTTTGAATATAGAACACATTTTTGCTTCCCATTCACTGTTTTTTGGTTATTATTGAATACTGTTTGCTATTGAACATTCATGTAACAATGTGTTTGTATGGACCAACATATTTTTCATTTCTATTGGGTAAAATTCCTAGGGGTTGAATTGCTGGGTCTATAGTAAATTTGTTTAACTTTTTAGAATTGCCAGACTGTTTTCCAAAGGGCTTACCCCATTTTACATTCGCCAACCAGGCAATGTAACGAAGGCTCTAAGTATTTCTCTATATCTCTTGTCAACACTTGTTTTTTTTTTCCTATTTTTTTGATAATGGCCATACCAGCATGTGTAGTGGTTCTTCAGTGGGGTTTGAATTTGCATTTCTTTTAAAGAGTAAGAATATGAAGCTCTTTGTATGTGCTGCATTAACCATTCAGGTGTCTTGGTGAAATGTCTGTTCAATCTTTATCCATATAAAAATTGGAATTGTTTTCTTATTATTGAATTATAATTCTTTATTTGGGAAATGCAAATTCTTTATATGAAGAATGACATTTGGCAATTATTTTTTCGCACAGTTTGTGACTTGTTTTTTTCATTTTCTTAGGCACTATCTTTGAAGTGCAAGGAAGTTTTTTAATTTCAATGAAAGCAGCAATTATTTTTTTTCTGTGATGGATCATGCATTTGGTGTATTCAGAAATTTTTGCCAACCCAGGGTCACTGTAATTTTTTTCTTATGTTTTAATTGTTAGAATCATTTTATAGAGTTAGATTTTATAGTAAGATGTATAAGTGATTTTGGAATTATTTTTTACAATATGGTAATGTTTTTGGGTCCTCTGTTTCATTTTTTTTTTTGCATATGGCTATAGCAATTATCGCCAGCACCATTTGTTGAAACGCCTTGGTAACGTTTGGTCAAAACTCAGTTGGGGGGCTGGGCGTGGTTTTGCTCATGCCGCGTAATCCCAGCCGCTTGGATAGGCCGAGGTGGGGCAGATCGCTTGAGGTGCAGGAGTTCGAGACGCAGCCTGGCCAATATGGGTGAAAACCCTGTCTCTACTAAAAATATAAAAATTAGCCAGGTGTGGTGAGCGTGCCTGTAGTCTTCAGCTACTCAGAAGGCTGAGGCAAGGAGATATTGGCTTGGAACTGGCATGGGGGGGAAAGGGAAGGGGGGAAGCAGAGGTTGGCAGTGAGCGCAAGATGGCCCATTGCTACTCGCACCTGGCCATTGCAGCATGTATCCATCTCAAAAAAAAAAAAAAAATCAGCTGGGGCATTTAATGTAAAGGCTTATTTCTAGCTTCTCTGATCTATGTTTAGCCCTTATGCCAGTACCAATGCCTCTGTGTTTCTGTGAATTTATCATGCATTGTAAATGGGGTAGTACAAATTCTTACAAACTTTTTTTTCTAACGCTTTCAAAATTGTTCTGGCCTGTTTTAGGTCCTTTACATTAAGAAAATATACAGGATCAGCATGTCCAAATTTTCTACAATATAACCTGGCTAAGTTTTTGATAGGGATTTCATTGAATTTACTTTATTTTTATTGGAACATTTTCTCATGTTTTTAATAATTCTGATAAGCTTTTAACTGGGACAGTTTTGGGAGGCATTTTATGGTGGGAAGAAAGGGAGTTGGGATAAACTTTTAATTTCGGCCTTTTCATCTCATGCTTTCACTCAATTATTTGCTCTATGATACGTATGCAGAGAAGATGGGTCTTTTGCAATTGAGAACTTGTGGGCTATAAATTTCTTAGGCTGTTAATAATTGTACTGAGTTCTCCCTAGAGATGCCACAGGGTAACCCCAGACAAGAAGAGAGGCGGCAAGGAAATCCTGGAAGGGTGGCGATTATGCCTGATGGGGCAGTTCATACCAGGAGTTGACGACTGCCCCTTATCAACAGCAGTGCAGGTTGGCAGGATGACCCTCAGCATGACAAATGGACTACACGCTGCATTACTCGGTGGGCTGGGCAAGGCAGGCAGTTGCCGTCAGAAGGCATCTGCCAGATGTGGGGAGGAAGAGCGTTCCAGCCATGACGCTGACAAGAAGAAAGTGGGAGGCAGCACGACAGCGCAAAGTGCCGACGGGGTGCTGCACACGGAGCCCAGGAATCGACTCTCGGCTTTCTTCCGGATCATGGTTCACGGTGGGGTTTAGCAGCCCTCAATTTTCTGATGTTATAAAGGTTAGAAGGGCAGTGACCTTGGGAGAGTTTACACTCAATTTTAATTTTTAATTGTTTCAATGAAGATGGAAACTGTTTTCTGTCAGTCAATAAGCAGCGGTTCATTCTGCTGTATAATGGATGTGGATAAGCGATTGCTGTTTGTTATCACCTTTAACTGCCAGAGAAGTCTTATTATGTGGTGATTTTGGAACTCCAGGACTTTTACGCAGCCTCCGGGGTTAATTCTTAATCCATGTCAAGCATCAATTGTTGTTACATATAACAGGTTATGGCCACCTTCAAAAGGAAGGGAAAGTTTCAAAGTCTCTTAAGTTTTTAAAATGCATAAAAAGCAAGTATGCTGAGAGAACTAGAGATCTGAACTAGGGGGTCTGAGCATCACAGGAGTTCAGTGAAAACATGTCTGAACAATCAGCTGAGCAATCAGATGTTCCAGGAAATAATGGCCTAACCCTAACCTAATCAGGGTGAAAGAAAAAACATCATCTTTAGAAACTCAAGCTGCATCACAACAGAGAAGCAGCAATGCTTTAATGGCAATAATCACTTAGTAGTTTAGAGATGGAAAAATGATCGAGAAACGTAATTCCTTGGCATGTTATGAAAAAGAATCCTAAATATTCCAATTCGCATTTACGGCCGTTCAATTGAGACAGAAGTCTGTTTGAAAGTTTAAATGAAAGAACGGGATATAAAAAGAAAATTGTAGCTTGGTTTTCGAAGCATAGAACTACTTTCCTCACTCTAACTAGTGTAGTATAGATAGGAAAGTGTTTTGCATTCTTGTGTCAAAGGCCACTAAATGCAGAGACGTTGGCCTCAGAAGGGCATGAGGATGAGGTCAAGGTTTTTGAATAGAGGAAGCAGAAAATGCACAAAATTTTGCTTTCCTACAACAGGTGACATGTAGCTTTTGAAAAAATACTTTGGGTAAGAAAGTCCTGGTGTGGCCAGTGTGGTGGCTCATACCTATAATCCCAGCACTTTGGGAGCTGATGGTGGGAGGATTGCTTGAGGACAGGAGTTTGAGACTCAGCCTGAGTAACAGCAGAAATACCCCATCATCTACAAACAACAACAAACAGCAACAAAATTAGCTGGGCGTGGTTGGTGCACATCTGTAGTCCCAGCTACTGCAGAGGCTGAGGTGGGAGTGTTGGCTTGAACTCAGGAGTTGGAACGCTACAGTGAAGCTTATGGTCCGCCATTACTGCACTCCTGCTTGTGTGACAAGTGTAAAGACCCAGTCTCAACAATAACAAAAGAAGTCCGTGTTGTGTTTGTGTGTATGTGTGTCTACATGTGGTGTTGTGTGGTGTGTGTGTTGTATGTGGTGTGTGTTGTGTAGTGTTGGTGTGTATGTGTGTATGTGGGTGGTGTGTATGTGGTGTATGGTGTGTGTGTATGTGTGTATGTGGTGTGTGGGTGTGTATGTGTAGGGTGTGTGTGGGTGTGTGGTGTGTGTGTATGTGTGTTTGTGGTGTGTAATGTGGTGTGTGTGTTGTATGTGTGGTGTGTGTATGGTGTATGTGTATGTGTGGTGTGTGTGTGTATGTGTGTATGTGTGGTGTGGTGTAATGTGTGGTGTGTGTGTGTATGTGTGTTATGTGTGGTGGGTGTATGTAGTGTGTAATGTGTGGTGTGTGTATGTGTGTATGTGTGGTGTGTGTGGTGTGTGTGTTGTGTGGTGTGTGTGTATGTGGTGTGTGTGTGGTGTGTGGCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5275:HG2_PB_pbsv_17517:HG4_PB_pbsv_17418:HG3_PB_pbsv_17191:HG3_PB_SVrefine2PBcRDovetail_8512:HG2_PB_SVrefine2PBcRplusDovetail_4837:HG2_PB_SVrefine2PB10Xhap12_12725:HG2_PB_SVrefine2Falcon1plusDovetail_5276:HG4_PB_SVrefine2PBcRDovetail_8768:HG4_PB_SVrefine2Falcon1Dovetail_10850:HG3_PB_SVrefine2Falcon1Dovetail_10831:HG2_PB_HySA_31894:HG2_PB_PB10Xdip_14280;NumClusterSVs=13;ExactMatchIDs=HG2_PB_pbsv_17517;NumExactMatchSVs=1;ClusterMaxShiftDist=0.252755;ClusterMaxSizeDiff=0.252755;ClusterMaxEditDist=0.287813;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=6379;DistBack=1;DistForward=62;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=18:68132344-68132345;PctSeqSimilarity=0.9299;PctSizeSimilarity=0.9084;PctRecOverlap=0.9084;SizeDiff=584;StartDistance=5;EndDistance=5;GTMatch=1;TruScore=91;MatchId=2445.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:95:1/1:3:32:0:21:./.:20:169:1:49:1/1:0:23:1/1:2:383:.:6239:.
chr18	69082261	HG2_Ill_GATKHC_27741	T	TATATATATCAAATATATATATATATCATATATATATATATCATATATATATCAATATA	20	PASS	ClusterIDs=HG2_PB_pbsv_17521:HG2_PB_HySA_31907:HG4_PB_HySA_25474:HG4_Ill_Krunchall_23841:HG4_Ill_GATKHC_27689:HG4_Ill_GATKHCSBGrefine_11879:HG4_Ill_250bpfermikitraw_22787:HG4_Ill_150bpfermikitraw_21931:HG3_Ill_Krunchall_23083:HG3_Ill_GATKHC_27605:HG3_Ill_GATKHCSBGrefine_11426:HG3_Ill_250bpfermikitraw_22486:HG3_Ill_150bpfermikitraw_21844:HG2_Ill_Krunchall_23486:HG2_Ill_GATKHC_27741:HG2_Ill_GATKHCSBGrefine_11520:HG2_Ill_250bpfermikitraw_23147:HG2_Ill_150bpfermikitraw_21819:HG3_Ill_Spiral_17907:HG3_Ill_manta_3855:HG2_Ill_manta_4704:HG4_PB_pbsv_17424:HG3_PB_pbsv_17195;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21819:HG2_Ill_250bpfermikitraw_23147:HG2_Ill_GATKHCSBGrefine_11520:HG2_Ill_GATKHC_27741:HG2_Ill_Krunchall_23486:HG3_Ill_150bpfermikitraw_21844:HG3_Ill_250bpfermikitraw_22486:HG3_Ill_GATKHCSBGrefine_11426:HG3_Ill_GATKHC_27605:HG3_Ill_Krunchall_23083:HG4_Ill_150bpfermikitraw_21931:HG4_Ill_250bpfermikitraw_22787:HG4_Ill_GATKHCSBGrefine_11879:HG4_Ill_GATKHC_27689:HG4_Ill_Krunchall_23841;NumExactMatchSVs=15;ClusterMaxShiftDist=0.121739;ClusterMaxSizeDiff=0.121739;ClusterMaxEditDist=0.243478;PBcalls=5;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=3240;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=18:69082260-69082262;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2446.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:44:1|0:4:21:24:6:./.:1:25:15:1:0/1:18:12:./.:.:.:.:.:.
chr18	69143724	HG2_Ill_GATKHCSBGrefine_11521	C	CAGAGAGAAGGAAGAACAGTGTGGTGTGGTGGCACACCTGAGAGCCACACTGGGA	20	PASS	ClusterIDs=HG3_PB_pbsv_17196:HG3_PB_HySA_26418:HG2_PB_HySA_31908:HG3_Ill_svaba_21854:HG2_PB_pbsv_17522:HG3_Ill_scalpel_16709:HG3_Ill_manta_3856:HG3_Ill_Spiral_17908:HG3_Ill_Krunchall_23084:HG3_Ill_GATKHC_27606:HG3_Ill_GATKHCSBGrefine_11427:HG3_Ill_FB_14859:HG3_Ill_250bpfermikitraw_22487:HG3_Ill_150bpfermikitraw_21845:HG2_Ill_svaba_21641:HG2_Ill_manta_4705:HG2_Ill_Krunchall_23487:HG2_Ill_GATKHC_27742:HG2_Ill_GATKHCSBGrefine_11521:HG2_Ill_250bpfermikitraw_23148;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23148:HG2_Ill_GATKHCSBGrefine_11521:HG2_Ill_GATKHC_27742:HG2_Ill_Krunchall_23487:HG2_Ill_manta_4705:HG2_Ill_svaba_21641:HG3_Ill_150bpfermikitraw_21845:HG3_Ill_250bpfermikitraw_22487:HG3_Ill_FB_14859:HG3_Ill_GATKHCSBGrefine_11427:HG3_Ill_GATKHC_27606:HG3_Ill_Krunchall_23084:HG3_Ill_Spiral_17908:HG3_Ill_manta_3856:HG3_Ill_scalpel_16709:HG3_Ill_svaba_21854;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0877193;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.293103;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=12;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=40937;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=18:69143725-69143726;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:51:0|1:32:5:4:45:1|0:1:31:22:0:0/1:16:15:./.:.:.:.:.:.
chr18	69600988	HG2_PB_pbsv_17524	A	ACACGAAGGGTCAGGAGATGAGACCATACCCGGCTAAAACGTGAAACGCCCGTCATACTAAAAATCACAAAAAATTTAGCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCCTATTGGGAGGCTGAGGCGGAGAAATGCGTGAACGCCGGGAGGCGGAGCTTGGCGTGAGCCCGATCCGGCCACTTGTCACTCCAGCCCTGGGCACAGGAAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTATAATT	20	PASS	ClusterIDs=HG3_PB_pbsv_17199:HG2_PB_assemblyticsfalcon_11787:HG2_PB_pbsv_17524:HG2_PB_HySA_31912:HG2_Ill_breakscan11_4799:HG2_PB_SVrefine2Falcon1plusDovetail_5279;NumClusterSVs=6;ExactMatchIDs=HG2_PB_pbsv_17524;NumExactMatchSVs=1;ClusterMaxShiftDist=0.105647;ClusterMaxSizeDiff=0.105647;ClusterMaxEditDist=0.27289;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=267;DistBack=9;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=18:69600989-69600988;PctSeqSimilarity=0.9385;PctSizeSimilarity=0.9888;PctRecOverlap=0.9588;SizeDiff=3;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=96;MatchId=2448.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:1|0:1:18:23:0:1|0:0:5:17:0:0/1:30:8:./.:.:.:.:.:.
chr18	69942342	HG3_PB_HySA_26430	T	TAAAAATATTTTCTAGCTAAAACGGTGAAACCCGTTCTACTAAAAAATAAAAAATTAGCCGGCGTAGTGGCGGGCTCTTTAGTCCAGCTACTCGGAGTCTGAGGCAGAGAATGGCTGAACCCGGAGGCGGAGCTTGCAGTGACCGAGATCCGCACTGCATCCAGCCTGCGAAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_26430:HG3_PB_pbsv_17202:HG2_PB_pbsv_17526:HG2_PB_assemblyticsfalcon_11792:HG2_PB_SVrefine2Falcon1plusDovetail_5282:HG2_PB_HySA_31914:HG2_Ill_breakscan11_4800;NumClusterSVs=7;ExactMatchIDs=HG3_PB_HySA_26430;NumExactMatchSVs=1;ClusterMaxShiftDist=0.144928;ClusterMaxSizeDiff=0.144928;ClusterMaxEditDist=0.213552;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=223;DistBack=44363;DistForward=32468;DistMin=32468;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=18:69942343-69942355;PctSeqSimilarity=0.9286;PctSizeSimilarity=0.8884;PctRecOverlap=0.8884;SizeDiff=-28;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=2449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:41:./.:10:11:14:10:./.:2:12:28:0:0/1:37:10:./.:.:.:.:.:.
chr18	71807707	HG4_Ill_GATKHCSBGrefine_11888	G	GAAGGAAGGAAGAAAGGCAGGGAGAAGGGAGGAAGAGGCAGTGAAACCTTGATGGT	20	PASS	ClusterIDs=HG2_Ill_GATKHC_27775:HG2_PB_HySA_31936:HG4_PB_pbsv_17433:HG4_Ill_GATKHC_27727:HG2_PB_pbsv_17534:HG4_Ill_GATKHCSBGrefine_11888:HG4_Ill_150bpfermikitraw_21962;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_27775:HG4_Ill_GATKHC_27727:HG4_Ill_GATKHCSBGrefine_11888:HG4_Ill_150bpfermikitraw_21962;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.353982;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=7;DistForward=34418;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=219;REFWIDENED=18:71807703-71807921;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:0|1:36:2:0:32:./.:22:0:5:3:0/0:26:2:./.:.:.:.:.:.
chr18	71936587	HG3_Ill_GATKHC_27652	A	ACGTGTCTAAACACAGGAGCACCCTGGGGCTCAGTCCCTGGTCCTCACCCCTCCTCCATCTGCGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4850:HG3_PB_assemblyticsfalcon_11820:HG3_PB_pbsv_17213:HG3_PB_HySA_26456:HG2_PB_SVrefine2PB10Xhap12_12740:HG2_PB_PB10Xdip_14304:HG2_PB_HySA_31953:HG2_PB_pbsv_17537:HG3_Ill_manta_3862:HG3_Ill_Krunchall_23118:HG3_Ill_GATKHC_27652:HG3_Ill_GATKHCSBGrefine_11436:HG3_Ill_250bpfermikitraw_22526:HG2_PB_SVrefine2Falcon1plusDovetail_5292:HG2_Ill_SVrefine2DISCOVARplusDovetail_5704:HG2_Ill_Krunchall_23518:HG2_Ill_GATKHC_27785:HG2_Ill_GATKHCSBGrefine_11533:HG2_Ill_250bpfermikitraw_23175:HG2_Ill_150bpfermikitraw_21846;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21846:HG2_Ill_250bpfermikitraw_23175:HG2_Ill_GATKHCSBGrefine_11533:HG2_Ill_GATKHC_27785:HG2_Ill_Krunchall_23518:HG2_Ill_SVrefine2DISCOVARplusDovetail_5704:HG2_PB_SVrefine2Falcon1plusDovetail_5292:HG3_Ill_250bpfermikitraw_22526:HG3_Ill_GATKHCSBGrefine_11436:HG3_Ill_GATKHC_27652:HG3_Ill_Krunchall_23118:HG3_Ill_manta_3862;NumExactMatchSVs=12;ClusterMaxShiftDist=0.243902;ClusterMaxSizeDiff=0.243902;ClusterMaxEditDist=0.325203;PBcalls=9;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=4859;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=64;REFWIDENED=18:71936588-71936651;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2452.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:41:0|1:34:1:0:35:1|0:1:20:12:0:0/1:27:22:./.:.:.:.:.:.
chr18	73238444	HG4_Ill_SVrefine2DISCOVARDovetail_12266	G	GAATGATAGAATTAGCAGAAACACGACGGAATGGAAGTACATGGCAAGCTCACGGACCATGGGGGGACACAACCAAGTAGAGTCTGGGGAGGTTGGCTGGACGGGGCTGGGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10849:HG2_PB_HySA_31966:HG3_PB_HySA_26469:HG4_PB_SVrefine2PBcRDovetail_8784:HG3_PB_pbsv_17224:HG4_PB_SVrefine2Falcon1Dovetail_10870:HG2_PB_pbsv_17547:HG4_Ill_SVrefine2DISCOVARDovetail_12266:HG2_Ill_SVrefine2DISCOVARplusDovetail_5712;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5712:HG4_Ill_SVrefine2DISCOVARDovetail_12266:HG4_PB_SVrefine2Falcon1Dovetail_10870:HG4_PB_SVrefine2PBcRDovetail_8784;NumExactMatchSVs=4;ClusterMaxShiftDist=0.161435;ClusterMaxSizeDiff=0.152466;ClusterMaxEditDist=0.313559;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=111;DistBack=-111;DistForward=-1;DistMin=-111;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=223;REFWIDENED=18:73238445-73238667;PctSeqSimilarity=0.9964;PctSizeSimilarity=1;PctRecOverlap=0.7658;SizeDiff=0;StartDistance=-26;EndDistance=-26;GTMatch=0;TruScore=92;MatchId=2453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:37:0|1:24:2:0:27:./.:4:0:6:1:0/1:21:4:./.:.:.:.:.:.
chr18	73953924	HG2_Ill_MetaSV_2189	T	TCATAAGCTAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGTGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4804:HG3_PB_pbsv_17229:HG2_PB_pbsv_17550:HG3_PB_assemblyticsfalcon_11847:HG3_PB_HySA_26481:HG4_PB_pbsv_17449:HG4_Ill_MetaSV_2257:HG2_PB_SVrefine2PBcRplusDovetail_4857:HG2_PB_SVrefine2PB10Xhap12_12747:HG2_PB_SVrefine2Falcon2Bionano_8588:HG4_PB_SVrefine2PBcRDovetail_8786:HG4_Ill_SVrefine2DISCOVARDovetail_12267:HG3_PB_SVrefine2PBcRDovetail_8529:HG2_Ill_SVrefine2DISCOVARplusDovetail_5713:HG2_Ill_MetaSV_2189:HG2_10X_SVrefine210Xhap12_12191:HG4_PB_SVrefine2Falcon1Dovetail_10873:HG3_PB_SVrefine2Falcon1Dovetail_10851:HG3_Ill_SVrefine2DISCOVARDovetail_12508:HG2_PB_SVrefine2Falcon1plusDovetail_5297:HG4_PB_HySA_25532:HG2_PB_PB10Xdip_14315:HG2_PB_HySA_31976;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12191:HG2_Ill_MetaSV_2189:HG2_Ill_SVrefine2DISCOVARplusDovetail_5713:HG3_PB_SVrefine2PBcRDovetail_8529:HG4_Ill_SVrefine2DISCOVARDovetail_12267:HG4_PB_SVrefine2PBcRDovetail_8786;NumExactMatchSVs=6;ClusterMaxShiftDist=0.176647;ClusterMaxSizeDiff=0.176647;ClusterMaxEditDist=0.255443;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=326;DistBack=-1;DistForward=17756;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=18:73953925-73953939;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2454.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:76:1/1:0:14:0:14:1/1:0:6:0:8:1/1:0:25:1/1:1:64:.:.:.
chr18	74323488	HG2_PB_SVrefine2Falcon2Bionano_8593	C	CTGCGTGTGTGCGTGTCTGCCTGCGTGTGTGCCTGCGGTGGAGGGGGCGATGTGCCTGCGTGTGTGCCTGCGTGTGTGTGTGTGCCTGCGTGTGTACCTGCGTGTCTGCCTGCGTGTGTGCTTGCGGTGGCGGGGGCGGTGTGCCTGCGTGTGTGTGTGTGTGCCTGCGTGTGTACCTGCGTGTCTGCCTGCGTGTGTGCCTGCGGTGGCGGGGGCGGTGTGCCTGCGTGTGTGCCTGCGTGTGTGTGTGCGTGCGTGTCTGCCTGCGTGTGTGCCTGCGGTGGAGGGGGCGATGTGCCTGCGTGTGTGCGTGTGTGCGTGTCTGCCTGCGTGTGTGCCTGCGGTGGAGGGGGCGATGTGCCTGCGTGTGTACCTGCGTGTCTGCCTGCGTGTGTGCCTGCGGTGGAGGGGGCGATGTGCCTGCGTGTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10858:HG2_PB_pbsv_17560:HG4_PB_pbsv_17459:HG3_PB_HySA_26505:HG3_PB_pbsv_17239:HG4_PB_HySA_25551:HG2_PB_PB10Xdip_14324:HG2_PB_HySA_32012:HG4_PB_SVrefine2Falcon1Dovetail_10878:HG2_PB_SVrefine2PBcRplusDovetail_4862:HG2_PB_SVrefine2PB10Xhap12_12754:HG2_PB_SVrefine2Falcon2Bionano_8593:HG3_PB_SVrefine2PBcRDovetail_8534:HG4_PB_SVrefine2PBcRDovetail_8792:HG2_PB_SVrefine2Falcon1plusDovetail_5304;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8593:HG2_PB_SVrefine2PB10Xhap12_12754:HG2_PB_SVrefine2PBcRplusDovetail_4862;NumExactMatchSVs=3;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.176837;ClusterMaxEditDist=0.316314;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=428;DistBack=25536;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=550;REFWIDENED=18:74323489-74324038;PctSeqSimilarity=0.9814;PctSizeSimilarity=0.9673;PctRecOverlap=0.4009;SizeDiff=14;StartDistance=-250;EndDistance=-250;GTMatch=0;TruScore=78;MatchId=2455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:116:1/1:0:30:0:34:1/1:2:133:1:71:./.:0:0:./.:1:9:.:.:.
chr18	74563038	HG2_10X_SVrefine210Xhap12_12197	G	GAAGAGTTTGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4805:HG2_PB_pbsv_17563:HG3_PB_pbsv_17246:HG2_PB_HySA_32017:HG3_PB_HySA_26512:HG4_PB_HySA_25557:HG4_PB_pbsv_17463:HG2_PB_PB10Xdip_14328:HG4_PB_SVrefine2PBcRDovetail_8795:HG3_PB_SVrefine2Falcon1Dovetail_10863:HG4_Ill_GATKHCSBGrefine_11910:HG3_PB_SVrefine2PBcRDovetail_8541:HG3_Ill_MetaSV_2329:HG3_Ill_GATKHCSBGrefine_11454:HG2_PB_SVrefine2PBcRplusDovetail_4865:HG2_PB_SVrefine2PB10Xhap12_12758:HG2_PB_SVrefine2Falcon2Bionano_8597:HG2_Ill_MetaSV_2192:HG2_Ill_GATKHCSBGrefine_11551:HG2_10X_SVrefine210Xhap12_12197:HG4_PB_SVrefine2Falcon1Dovetail_10883:HG2_PB_SVrefine2Falcon1plusDovetail_5308:HG3_Ill_manta_3867;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12197:HG2_Ill_GATKHCSBGrefine_11551:HG2_Ill_MetaSV_2192:HG2_PB_SVrefine2Falcon2Bionano_8597:HG2_PB_SVrefine2PB10Xhap12_12758:HG2_PB_SVrefine2PBcRplusDovetail_4865:HG3_Ill_GATKHCSBGrefine_11454:HG3_Ill_MetaSV_2329:HG3_PB_SVrefine2PBcRDovetail_8541:HG4_Ill_GATKHCSBGrefine_11910;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0833333;ClusterMaxEditDist=0.261941;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=311;DistBack=13644;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=18:74563039-74563049;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:76:./.:0:0:0:0:./.:0:0:0:0:./.:0:6:1/1:2:77:.:.:.
chr18	74638701	HG2_PB_SVrefine2PBcRplusDovetail_4867	T	TAAAGGGTGATTAGACAGTGTGTGTGTGTATGGTATAAAGGGTGATTAGACAGTGTGTGTGTATATAGTATAAAGGGTGATTACACAGTGTGTGTGTGTGTATGGTATAAAGGGTGATTAGACAGTGTATATGTGTGTGTGTATGGTATAAAGGGTGATTAGACTGTGTGTATGGTATAAACGGTGATTAGACTGTGTGTATGATATAAAGGGTGATTAGACAGTGTGTGTATATGGTATAAAGGGTGATTAGACAGTGTGTGTGTGTATGGTATAAAGGGTGATTAGGGCCGGGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATCGACGGATCACGAGGTCAGGAGATCGAGATCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTACCCAGGTGTGGTGGCTGGCGCCTGTAGTCCCAGCTACTCAGGAGGGTGAGGGAGGAGAATGGTGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCTGAGATGGCACCACTGCACTCTAGTCTGGGCGACTGAGCGAGAGACTGTCTCAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_26514:HG2_PB_pbsv_17565:HG4_PB_pbsv_17465:HG3_PB_pbsv_17248:HG2_PB_PB10Xdip_14330:HG3_Ill_GATKHCSBGrefine_11455:HG2_Ill_SVrefine2DISCOVARplusDovetail_5723:HG2_Ill_GATKHCSBGrefine_11552:HG4_PB_HySA_25562:HG4_PB_HySA_25560:HG3_Ill_MetaSV_2330:HG3_PB_SVrefine2PBcRDovetail_8543:HG3_PB_SVrefine2Falcon1Dovetail_10865:HG3_Ill_SVrefine2DISCOVARDovetail_12516:HG2_PB_SVrefine2PBcRplusDovetail_4867:HG2_PB_SVrefine2PB10Xhap12_12760:HG2_PB_SVrefine2Falcon2Bionano_8599:HG2_PB_SVrefine2Falcon1plusDovetail_5310:HG2_Ill_SVrefine2DISCOVARplusDovetail_5722:HG2_10X_SVrefine210Xhap12_12199:HG4_Ill_SVrefine2DISCOVARDovetail_12277:HG4_PB_SVrefine2PBcRDovetail_8796:HG4_PB_SVrefine2Falcon1Dovetail_10884:HG2_PB_HySA_32022;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12199:HG2_Ill_SVrefine2DISCOVARplusDovetail_5722:HG2_PB_SVrefine2Falcon1plusDovetail_5310:HG2_PB_SVrefine2Falcon2Bionano_8599:HG2_PB_SVrefine2PB10Xhap12_12760:HG2_PB_SVrefine2PBcRplusDovetail_4867:HG3_Ill_SVrefine2DISCOVARDovetail_12516:HG3_PB_SVrefine2Falcon1Dovetail_10865:HG3_PB_SVrefine2PBcRDovetail_8543;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0406435;ClusterMaxSizeDiff=0.03895;ClusterMaxEditDist=0.137238;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=581;DistBack=32;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=166;REFWIDENED=18:74638669-74638834;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9966;PctRecOverlap=0.895;SizeDiff=2;StartDistance=-60;EndDistance=-60;GTMatch=0;TruScore=96;MatchId=2457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:98:./.:0:0:0:0:./.:0:0:0:0:1/1:0:12:1/1:3:188:.:.:.
chr18	74794688	HG4_Ill_250bpfermikitraw_22857	T	TGAGGAATCCTTCCTCCCTGCAGCAGCTGGCTGTCATAGGTGGTCTAGGGAACGCCATGTGGCTCAGAAGGACGAGGAATCCTTCCTCCCTGCTGCAGCTAGCTGTCATAGGTGGTCTAGGGAACGCCATGTGGCTCAGAAGGAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5727:HG3_PB_assemblyticsfalcon_11874:HG4_PB_HySA_25573:HG4_PB_pbsv_17471:HG4_PB_SVrefine2Falcon1Dovetail_10888:HG4_Ill_manta_3997:HG4_Ill_GATKHC_27767:HG4_Ill_GATKHCSBGrefine_11917:HG4_Ill_250bpfermikitraw_22857:HG4_Ill_150bpfermikitraw_22002:HG3_PB_SVrefine2Falcon1Dovetail_10870:HG2_PB_SVrefine2Falcon1plusDovetail_5314:HG2_Ill_manta_4717:HG2_Ill_GATKHC_27824:HG2_Ill_GATKHCSBGrefine_11557:HG3_Ill_GATKHCSBGrefine_11459:HG2_PB_pbsv_17574:HG4_PB_SVrefine2PBcRDovetail_8799:HG4_Ill_SVrefine2DISCOVARDovetail_12281;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11557:HG2_Ill_GATKHC_27824:HG2_Ill_manta_4717:HG2_PB_SVrefine2Falcon1plusDovetail_5314:HG3_PB_SVrefine2Falcon1Dovetail_10870:HG4_Ill_150bpfermikitraw_22002:HG4_Ill_250bpfermikitraw_22857:HG4_Ill_GATKHCSBGrefine_11917:HG4_Ill_GATKHC_27767:HG4_Ill_manta_3997:HG4_PB_SVrefine2Falcon1Dovetail_10888;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0684932;ClusterMaxEditDist=0.215278;PBcalls=8;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=144;DistBack=21;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=212;REFWIDENED=18:74794614-74794825;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:23:0|1:29:4:2:18:1|0:1:13:11:0:0/1:27:17:./.:.:.:.:.:.
chr18	74829689	HG2_PB_SVrefine2Falcon2Bionano_8604	G	GCAGTGGGTTGGAGTGGGATAGGGGACGGTGCGTTGGAGTGGGATGGGGGTCAGTGGGTTGGGGTGGGACGGGGGTCAGTGGGTTGGAGTGGGATGGGTTGGAGTGGGACAGGGGACAGTGGGTTGGAGTGGGACGGGGGACATTGGGTTGGGGTGGGACGGGGGTCAGTGGGTTGGGGCGGGATGGGGTCAGTGGGTTGGGGTGGGACGGGGACAGGGGGTTGGGGCGGGATGGGGGACAGTGGGTTGGGGTGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10890:HG4_PB_SVrefine2PBcRDovetail_8801:HG2_PB_SVrefine2PB10Xhap12_12765:HG2_PB_SVrefine2PBcRplusDovetail_4872:HG2_PB_SVrefine2Falcon2Bionano_8604:HG3_PB_SVrefine2PBcRDovetail_8549:HG3_PB_SVrefine2Falcon1Dovetail_10872:HG2_PB_SVrefine2Falcon1plusDovetail_5317;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8604:HG2_PB_SVrefine2PBcRplusDovetail_4872;NumExactMatchSVs=2;ClusterMaxShiftDist=0.192152;ClusterMaxSizeDiff=0.192152;ClusterMaxEditDist=0.211096;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=358;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=402;REFWIDENED=18:74829690-74830091;PctSeqSimilarity=0.9432;PctSizeSimilarity=0.8972;PctRecOverlap=0.7093;SizeDiff=-41;StartDistance=-96;EndDistance=-96;GTMatch=1;TruScore=84;MatchId=2459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:69:1/1:2:22:1:16:1/1:0:32:0:7:./.:0:7:./.:0:7:.:.:.
chr18	74960067	HG3_Ill_GATKHCSBGrefine_11460	T	TGTGGGTTTTTTTATTTTTTATTTTTTATTTTTTATTTATTTTTTTTTTAAATTTTTTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACCAACGTGTCATCTATCATTAGGTATATCTCCCACTGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGCCCTTGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4806:HG2_PB_pbsv_17578:HG3_PB_pbsv_17262:HG3_PB_assemblyticsfalcon_11877:HG2_PB_HySA_32046:HG2_PB_SVrefine2Falcon2Bionano_8605:HG2_Ill_MetaSV_2195:HG3_Ill_manta_3869:HG3_Ill_MetaSV_2332:HG3_Ill_GATKHCSBGrefine_11460:HG3_PB_SVrefine2PBcRDovetail_8550:HG4_PB_SVrefine2Falcon1Dovetail_10891:HG3_PB_SVrefine2Falcon1Dovetail_10873;NumClusterSVs=13;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_11460:HG3_Ill_MetaSV_2332:HG3_Ill_manta_3869;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0359408;ClusterMaxSizeDiff=0.0338266;ClusterMaxEditDist=0.167019;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=467;DistBack=14573;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=18:74960068-74960070;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.9852;PctRecOverlap=0.9832;SizeDiff=-7;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:36:0|1:32:0:1:32:0|1:19:0:0:7:0/1:21:16:./.:4:65:.:.:.
chr18	75883624	HG4_Ill_GATKHCSBGrefine_11925	A	ATCAACTAAATATTTACCCCATGAATCCCTCCTTCTCTGGGGTGATCACCCAGGACTGGATCCCCGCCAAGGGGCAGGGCACTGACCCCACACAGATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4879:HG4_PB_HySA_25604:HG3_PB_HySA_26553:HG4_Ill_manta_4003:HG2_PB_pbsv_17596:HG2_PB_HySA_32071:HG3_PB_pbsv_17272:HG2_Ill_breakscan11_4808:HG4_PB_pbsv_17494:HG2_PB_PB10Xdip_14362:HG3_PB_SVrefine2Falcon1Dovetail_10886:HG3_Ill_SVrefine2DISCOVARDovetail_12523:HG3_Ill_Krunchall_23174:HG3_Ill_GATKHC_27723:HG3_Ill_GATKHCSBGrefine_11470:HG3_Ill_250bpfermikitraw_22584:HG4_PB_SVrefine2PBcRDovetail_8811:HG4_Ill_SVrefine2DISCOVARDovetail_12286:HG4_Ill_GATKHC_27799:HG4_Ill_GATKHCSBGrefine_11925:HG4_Ill_250bpfermikitraw_22887:HG2_Ill_SVrefine2DISCOVARplusDovetail_5737:HG2_Ill_GATKHC_27854:HG2_Ill_GATKHCSBGrefine_11572:HG2_Ill_250bpfermikitraw_23241:HG2_10X_SVrefine210Xhap12_12212:HG2_PB_SVrefine2PB10Xhap12_12774:HG2_PB_SVrefine2Falcon2Bionano_8615:HG2_PB_SVrefine2Falcon1plusDovetail_5326;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12212:HG2_Ill_250bpfermikitraw_23241:HG2_Ill_GATKHCSBGrefine_11572:HG2_Ill_GATKHC_27854:HG2_Ill_SVrefine2DISCOVARplusDovetail_5737:HG4_Ill_250bpfermikitraw_22887:HG4_Ill_GATKHCSBGrefine_11925:HG4_Ill_GATKHC_27799:HG4_Ill_SVrefine2DISCOVARDovetail_12286:HG4_PB_SVrefine2PBcRDovetail_8811;NumExactMatchSVs=10;ClusterMaxShiftDist=0.107843;ClusterMaxSizeDiff=0.0895522;ClusterMaxEditDist=0.284314;PBcalls=13;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=97;DistBack=-98;DistForward=7369;DistMin=-98;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=100;REFWIDENED=18:75883625-75883724;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2461.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:53:0|1:22:5:2:43:1|0:1:16:7:0:0/1:20:23:./.:.:.:.:.:.
chr18	75890994	HG2_Ill_Krunchall_23579	G	GGGAACACACTGGCCCGGCTGCTGCAGAGGGCTTGTGTATGAGAGGTGGAGAGTGTGAGTGTGCACACCCAGGTGGATTCA	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_11904:HG2_PB_pbsv_17597:HG2_PB_HySA_32072:HG4_Ill_GATKHC_27800:HG4_Ill_GATKHCSBGrefine_11926:HG2_Ill_GATKHC_27855:HG2_Ill_GATKHCSBGrefine_11573:HG4_PB_HySA_25605:HG4_PB_pbsv_17495:HG4_Ill_manta_4004:HG4_Ill_Krunchall_23932:HG4_Ill_250bpfermikitraw_22888:HG4_Ill_150bpfermikitraw_22030:HG2_Ill_Krunchall_23579:HG2_Ill_250bpfermikitraw_23242:HG2_Ill_150bpfermikitraw_21905;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21905:HG2_Ill_250bpfermikitraw_23242:HG2_Ill_Krunchall_23579:HG4_Ill_150bpfermikitraw_22030:HG4_Ill_250bpfermikitraw_22888:HG4_Ill_Krunchall_23932;NumExactMatchSVs=6;ClusterMaxShiftDist=0.111801;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.21118;PBcalls=5;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=80;DistBack=7369;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=7;REFWIDENED=18:75890993-75891002;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2462.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:35:0|1:35:2:3:32:1|0:0:12:20:0:0/1:22:6:./.:.:.:.:.:.
chr18	76041020	HG2_PB_HySA_32083	G	GTGAGCATGTGCTTGACCTTAGAGTATGTGAGAGATCTTCTTGGTATTGATATCTATTTATACTACACTGTGTTCCAAGAGTGTGGTTGGTATGATTTAAATGTTTTTGGATGTATCGAGCCTTGCTTTATGGCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5335:HG2_10X_SVrefine210Xhap12_12217:HG4_PB_HySA_25615:HG2_PB_HySA_32083:HG3_PB_HySA_26562:HG2_PB_pbsv_17603:HG3_PB_pbsv_17279:HG4_PB_SVrefine2Falcon1Dovetail_10907:HG3_Ill_SVrefine2DISCOVARDovetail_12525:HG4_Ill_MetaSV_2267:HG4_PB_pbsv_17500:HG3_PB_SVrefine2Falcon1Dovetail_10892:HG4_Ill_SVrefine2DISCOVARDovetail_12287:HG2_10X_SVrefine210Xhap12_12216;NumClusterSVs=14;ExactMatchIDs=HG2_PB_HySA_32083:HG4_PB_HySA_25615;NumExactMatchSVs=2;ClusterMaxShiftDist=0.139194;ClusterMaxSizeDiff=0.139194;ClusterMaxEditDist=0.197183;PBcalls=9;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=134;DistBack=4509;DistForward=20;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=136;REFWIDENED=18:76040911-76041046;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9925;PctRecOverlap=0.3259;SizeDiff=1;StartDistance=90;EndDistance=90;GTMatch=0;TruScore=77;MatchId=2463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:32:./.:14:15:12:8:./.:4:18:5:0:0/1:31:20:./.:.:.:.:.:.
chr18	76181973	HG2_PB_SVrefine2PB10Xhap12_12786	C	CGGAGGCCTGCTGTAACACAGACACCTGCACCACGCAGGCATTGCACTCACATGCATCCTCTTTGCCGGTGT	20	PASS	ClusterIDs=HG3_PB_pbsv_17287:HG3_PB_HySA_26568:HG3_Ill_Krunchall_23181:HG3_Ill_GATKHC_27737:HG3_Ill_GATKHCSBGrefine_11478:HG3_Ill_250bpfermikitraw_22591:HG3_Ill_150bpfermikitraw_21942:HG2_Ill_scalpel_16430:HG2_Ill_Krunchall_23590:HG2_Ill_GATKHC_27874:HG2_Ill_GATKHCSBGrefine_11580:HG2_Ill_250bpfermikitraw_23250:HG2_Ill_150bpfermikitraw_21912:HG2_PB_pbsv_17609:HG2_PB_HySA_32094:HG3_PB_SVrefine2PBcRDovetail_8562:HG3_Ill_SVrefine2DISCOVARDovetail_12528:HG2_10X_SVrefine210Xhap12_12221:HG2_PB_SVrefine2Falcon1plusDovetail_5341:HG4_PB_SVrefine2PBcRDovetail_8819:HG4_PB_SVrefine2Falcon1Dovetail_10913:HG4_Ill_scalpel_16040:HG4_Ill_SVrefine2DISCOVARDovetail_12290:HG4_Ill_Krunchall_23943:HG4_Ill_GATKHC_27818:HG4_Ill_GATKHCSBGrefine_11933:HG4_Ill_250bpfermikitraw_22898:HG4_Ill_150bpfermikitraw_22038:HG3_PB_SVrefine2Falcon1Dovetail_10898:HG2_PB_SVrefine2PBcRplusDovetail_4888:HG2_PB_SVrefine2PB10Xhap12_12786:HG2_PB_SVrefine2Falcon2Bionano_8623:HG2_Ill_SVrefine2DISCOVARplusDovetail_5743:HG2_Ill_Krunchall_23589:HG2_Ill_GATKHC_27873:HG2_Ill_GATKHCSBGrefine_11579:HG2_Ill_250bpfermikitraw_23249:HG4_PB_HySA_25631:HG2_PB_PB10Xdip_14384;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23249:HG2_Ill_GATKHCSBGrefine_11579:HG2_Ill_GATKHC_27873:HG2_Ill_Krunchall_23589:HG2_Ill_SVrefine2DISCOVARplusDovetail_5743:HG2_PB_SVrefine2Falcon2Bionano_8623:HG2_PB_SVrefine2PB10Xhap12_12786:HG2_PB_SVrefine2PBcRplusDovetail_4888:HG3_PB_SVrefine2Falcon1Dovetail_10898:HG4_Ill_150bpfermikitraw_22038:HG4_Ill_250bpfermikitraw_22898:HG4_Ill_GATKHCSBGrefine_11933:HG4_Ill_GATKHC_27818:HG4_Ill_Krunchall_23943:HG4_Ill_SVrefine2DISCOVARDovetail_12290:HG4_Ill_scalpel_16040:HG4_PB_SVrefine2Falcon1Dovetail_10913:HG4_PB_SVrefine2PBcRDovetail_8819;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0684932;ClusterMaxSizeDiff=0.0547945;ClusterMaxEditDist=0.273973;PBcalls=14;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=71;DistBack=12124;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=18:76181974-76182039;PctSeqSimilarity=0.9878;PctSizeSimilarity=1;PctRecOverlap=0.2817;SizeDiff=0;StartDistance=-51;EndDistance=-51;GTMatch=0;TruScore=75;MatchId=2464.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:58:1/1:4:28:3:25:1/1:2:26:0:21:1/1:0:50:./.:.:.:.:.:.
chr18	76308645	HG3_Ill_Krunchall_23185	T	TACACACTGTACACAACTGCACACACACTCTGTACACACTGCACACACACGC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21914:HG2_PB_pbsv_17621:HG3_Ill_svaba_21955:HG2_Ill_svaba_21740:HG3_PB_pbsv_17300:HG2_Ill_breakscan11_4811:HG3_PB_assemblyticsfalcon_11935:HG3_Ill_svaba_21954:HG3_Ill_scalpel_16780:HG3_Ill_Spiral_17977:HG3_Ill_Krunchall_23185:HG3_Ill_GATKHC_27743:HG3_Ill_GATKHCSBGrefine_11481:HG3_Ill_Cortex_1626:HG3_Ill_250bpfermikitraw_22594:HG3_Ill_150bpfermikitraw_21945:HG2_PB_assemblyticsfalcon_11914:HG2_Ill_svaba_21739:HG2_Ill_manta_4722:HG2_Ill_Krunchall_23596:HG2_Ill_GATKHC_27882:HG2_Ill_GATKHCSBGrefine_11582:HG2_Ill_Cortex_3826:HG2_Ill_250bpfermikitraw_23254;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21914:HG3_PB_assemblyticsfalcon_11935:HG3_Ill_svaba_21954:HG3_Ill_scalpel_16780:HG3_Ill_Spiral_17977:HG3_Ill_Krunchall_23185:HG3_Ill_GATKHC_27743:HG3_Ill_GATKHCSBGrefine_11481:HG3_Ill_Cortex_1626:HG3_Ill_250bpfermikitraw_22594:HG3_Ill_150bpfermikitraw_21945:HG2_PB_assemblyticsfalcon_11914:HG2_Ill_svaba_21739:HG2_Ill_manta_4722:HG2_Ill_Krunchall_23596:HG2_Ill_GATKHC_27882:HG2_Ill_GATKHCSBGrefine_11582:HG2_Ill_Cortex_3826:HG2_Ill_250bpfermikitraw_23254;NumExactMatchSVs=19;ClusterMaxShiftDist=0.12963;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.265487;PBcalls=4;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=1668;DistForward=21;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=24;REFWIDENED=18:76308644-76308670;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2466.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:./.:16:8:6:17:./.:32:0:3:57:0/1:30:22:./.:.:.:.:.:.
chr18	76595104	HG2_Ill_250bpfermikitraw_23266	C	CACATTCATACACGACACTAGACATAGCTAGAGAATAATCCAGAGTAATCCAGAGCTGT	20	PASS	ClusterIDs=HG3_Ill_GATKHC_27764:HG3_PB_pbsv_17320:HG3_PB_HySA_26586:HG2_PB_HySA_32112:HG4_Ill_GATKHC_27844:HG4_Ill_GATKHCSBGrefine_11943:HG4_Ill_250bpfermikitraw_22916:HG3_PB_assemblyticsfalcon_11951:HG3_Ill_scalpel_16786:HG3_Ill_GATKHC_27765:HG2_Ill_GATKHC_27897:HG2_Ill_250bpfermikitraw_23266:HG4_PB_pbsv_17533;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23266:HG2_Ill_GATKHC_27897:HG3_Ill_GATKHC_27765:HG3_Ill_scalpel_16786:HG3_PB_assemblyticsfalcon_11951:HG4_Ill_250bpfermikitraw_22916:HG4_Ill_GATKHCSBGrefine_11943:HG4_Ill_GATKHC_27844;NumExactMatchSVs=8;ClusterMaxShiftDist=0.112903;ClusterMaxSizeDiff=0.0967742;ClusterMaxEditDist=0.232558;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=42;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=929;REFWIDENED=18:76595040-76595968;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2468.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:31:./.:16:17:0:6:./.:8:0:1:4:0/1:23:11:./.:.:.:.:.:.
chr18	76803395	HG2_PB_SVrefine2Falcon2Bionano_8645	A	ACACCCCAACCCCACTCCATCCCCCATCCCAACCCCCACCCCAACCCCCACCCCAACCCCCACCCCATCCCCCATCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCCCACCCCAACCCTCACCCCATCCCCCATCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCCCACCCCAACCTTCACCCCATCCCCCATCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCATCCCCCATCCCATCCCCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCCCACCCCAACCCTCACCCCATCCCCCATCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCATCCCCCATCCCATCCCCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCATCCCCCACTCACATCCCCCACCCCAACCCCCACCCAACCCCCACCCCAACCCCCACCCCAACCCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10944:HG3_PB_pbsv_17329:HG2_PB_PB10Xdip_14464:HG4_PB_SVrefine2Falcon1Dovetail_10945:HG2_PB_SVrefine2PBcRplusDovetail_4913:HG2_PB_pbsv_17643:HG2_PB_SVrefine2PB10Xhap12_12816:HG4_PB_pbsv_17540:HG2_PB_SVrefine2Falcon2Bionano_8645:HG4_PB_SVrefine2PBcRDovetail_8836:HG3_PB_SVrefine2Falcon1Dovetail_10928:HG3_PB_SVrefine2PBcRDovetail_8584:HG2_PB_SVrefine2Falcon1plusDovetail_5363;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8645:HG2_PB_SVrefine2PB10Xhap12_12816:HG2_PB_SVrefine2PBcRplusDovetail_4913;NumExactMatchSVs=3;ClusterMaxShiftDist=0.172549;ClusterMaxSizeDiff=0.17098;ClusterMaxEditDist=0.259554;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=671;DistBack=3345;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=157;REFWIDENED=18:76803396-76803552;PctSeqSimilarity=0.986;PctSizeSimilarity=0.997;PctRecOverlap=0.8291;SizeDiff=-2;StartDistance=-114;EndDistance=-114;GTMatch=0;TruScore=93;MatchId=2473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:41:1/1:0:17:0:6:./.:0:2:0:4:./.:0:0:./.:1:16:.:.:.
chr18	77160833	HG2_PB_HySA_32132	C	CCCCCTCCCCCGACCTCCCCCGCGCCCGACCTCCTCCCTGTTCCCTCCCCGACCTCCCCCTTCCCCCCCGACCTACACCCCGCCCCCCTACCTCCCCCCTCCCCGTGACCTGCCCCCCAGAACTTCCTCCCCATCCCGCCCCCCGACCTCCCCCCGCCCCCCTCCCCCGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10957:HG3_PB_SVrefine2Falcon1Dovetail_10939:HG2_PB_SVrefine2Falcon1plusDovetail_5374:HG4_PB_pbsv_17556:HG3_PB_pbsv_17342:HG2_PB_PB10Xdip_14483:HG2_PB_SVrefine2Falcon2Bionano_8655:HG2_PB_SVrefine2PBcRplusDovetail_4923:HG2_PB_SVrefine2PB10Xhap12_12827:HG3_PB_HySA_26613:HG2_PB_HySA_32132:HG3_PB_SVrefine2PBcRDovetail_8594:HG4_PB_SVrefine2PBcRDovetail_8845:HG4_PB_HySA_25671:HG2_PB_pbsv_17656;NumClusterSVs=15;ExactMatchIDs=HG2_PB_HySA_32132;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0879765;ClusterMaxSizeDiff=0.0879765;ClusterMaxEditDist=0.241379;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=169;DistBack=-140;DistForward=0;DistMin=-140;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=73;REFWIDENED=18:77160788-77160860;PctSeqSimilarity=0.9769;PctSizeSimilarity=0.9769;PctRecOverlap=0.9769;SizeDiff=-4;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=97;MatchId=2477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:41:1/1:0:19:0:19:./.:1:6:0:4:1/1:0:10:./.:.:.:.:.:.
chr18	77254282	HG2_PB_PB10Xdip_14484	C	GGGGAAGGCGAGAGCGGGCACACGCCCCCCATCAACCTGGTACCGCCGGGGAAGGCGAGAACGGGCACACGCCCCCCATCAACCTGGTACCGCCGGGGGAAGGCGAGAACGGGCACACGCCCCCCATCAACCTGGTGCGGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATGAACCTGGTACCGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCATCGACCTGGTGCGGCGGGGAAGGCGAGAGGGGGCACACGCCCCCATGAACCTGGTACCGCGGGGGAAGGCGAGAGCGGGCACACGCCCCCATGAACCTGGTACGGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCATGAACCTGGTGCGGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5376:HG4_PB_HySA_25681:HG2_PB_PB10Xdip_14484:HG4_PB_SVrefine2Falcon1Dovetail_10960:HG3_PB_SVrefine2PBcRDovetail_8596:HG2_PB_SVrefine2PB10Xhap12_12829:HG3_PB_SVrefine2Falcon1Dovetail_10941;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_14484;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0782726;ClusterMaxSizeDiff=0.0782726;ClusterMaxEditDist=0.176871;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=373;DistBack=44;DistForward=73;DistMin=44;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=814;REFWIDENED=18:77254192-77255005;PctSeqSimilarity=0.9856;PctSizeSimilarity=0.9714;PctRecOverlap=0.9688;SizeDiff=-11;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=97;MatchId=2478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:17:./.:18:2:5:9:./.:4:0:3:1:0/0:19:0:0/1:4:5:.:.:.
chr18	77301873	HG2_PB_SVrefine2PB10Xhap12_12834	T	TTCCATCCGTCCATCCATCCACGCACCTACCCGTCCATCCACCCACCTGTCCACCCACCCATCCACTCATCCATCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCATCCACCCACCCATTCACCAGTCCACCCACCCATCCACTCATCCATCCATCCATCCATGCACCTACCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCATCCATCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCATCCACCCACCCATCCACCAGTCCACCCACCCATCCACTCATCCATCCATCCATCCATGCACCTACCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCATCCGTCCAACCATCCACCTACCTGTCCACCCACCCATCCACTCATCCATCCATCCATCCACCAGTCCACCCACCCATCCACTCATCCATCCATCCATCCACACACCTACCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCATCCATCCAACCATCCACCTACCTGTCCACCCACCCATCCACTCATCCATCCATCCATCCACCAGTCCACCCACCCATCCACTCATCCATCCATCCATCCACACACCTACCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCATCCATCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCATCCATCCATCCATCCACCAGTCCACCCACCCATCCGCTCATCCATCCATCCATCCATCCATCCATCCATCCATCCATGCACCTACCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCATCCGTCCAACCATCCACCTACCTGTCCACCCACCCATCCACTCATCCATCCATCCATCCACCAGTCCGCCCACCCATCCACTCATCCATCCATCCATCCACACACCTACCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCATCCATCCAACCATCCACCCACCTGTCCACCCACCCATCCACTCCATCCATCCATCCATCCATCCATCCATCCACCCAGCCATCCACCCCTTCATCCATCCACTTACCCATCCACTCACCCATCCATCCATTCATCCATCCACCTATCCATTCATCTACCTACCCATCCATCCATTATCCATCCATATCCATCCATCCATCCATCCACCCATCCATCTACCCATCCATCCATTATCCATCCATATCCATCCATCCATCCATCCATCCCTTCATCCACCCCTTCATCCATCCATCCACCCATCCATTCATCTACCTACCCATCCATCCATTATCGATCCATATTCATCCACCCACCCATCCACCCACCCATCCATCCATCCATTCATCCATTCCTTCACCCACCCATCCACCCTTCCATTCATCCACCTACCCATCCATCCATTATCCATCCATATCCATCCACCCACCCATTCATCCATTCATCCATCCCTTCATCTATCCATCCACTTACCCATCCATCCATTATCCATCCATATCCATCTACCCACCCATTCATCCATTCATCCATCCCTTCATCCACCCATCCACCCTTCCATTCATCCACCTACCCCTCCATCCATTATCCATCCATATCCATCCACCCACCCATCCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10965:HG2_PB_pbsv_17663:HG3_PB_pbsv_17349:HG3_PB_SVrefine2PBcRDovetail_8600:HG3_PB_SVrefine2Falcon1Dovetail_10945:HG2_PB_SVrefine2PBcRplusDovetail_4927:HG2_PB_SVrefine2PB10Xhap12_12834:HG2_PB_SVrefine2Falcon2Bionano_8658:HG2_PB_SVrefine2Falcon1plusDovetail_5380;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8658:HG2_PB_SVrefine2PB10Xhap12_12834:HG2_PB_SVrefine2PBcRplusDovetail_4927;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0410628;ClusterMaxEditDist=0.186365;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1627;DistBack=9481;DistForward=20;DistMin=20;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=198;REFWIDENED=18:77301874-77302071;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9994;PctRecOverlap=0.9865;SizeDiff=1;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=99;MatchId=2479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:./.:0:5:0:4:1/1:0:153:0:178:1/1:0:9:./.:13:130:.:.:.
chr18	77306241	HG2_PB_SVrefine2PBcRplusDovetail_4928	C	CTCACCCTCTCCACACTCACCCTCTCCACATTCACCCTCTCCACATTCACCCTCTTCACACTCAGCCTCTCCACACTCACCCTCTCCACATTCACCCTCTCCACACTCACCCTCTCCAGGCTCACCCTCTCCACATTCACCCTCTCCACGCTCACCCTCTCCACACTGAGCCTCTCCACATTCACCCTCTCCACAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5381:HG2_PB_pbsv_17664:HG2_PB_HySA_32155:HG3_PB_HySA_26624:HG2_PB_PB10Xdip_14493:HG3_PB_SVrefine2PBcRDovetail_8601:HG4_PB_pbsv_17568:HG4_PB_SVrefine2Falcon1Dovetail_10966:HG3_PB_pbsv_17350:HG4_PB_SVrefine2PBcRDovetail_8848:HG3_PB_SVrefine2Falcon1Dovetail_10946:HG2_PB_SVrefine2PBcRplusDovetail_4928:HG2_PB_SVrefine2PB10Xhap12_12835:HG2_PB_SVrefine2Falcon2Bionano_8659;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5381:HG3_PB_SVrefine2PBcRDovetail_8601:HG3_PB_SVrefine2Falcon1Dovetail_10946:HG2_PB_SVrefine2PBcRplusDovetail_4928:HG2_PB_SVrefine2PB10Xhap12_12835:HG2_PB_SVrefine2Falcon2Bionano_8659;NumExactMatchSVs=6;ClusterMaxShiftDist=0.285714;ClusterMaxSizeDiff=0.285714;ClusterMaxEditDist=0.348052;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=195;DistBack=-10628;DistForward=126;DistMin=-10628;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=476;REFWIDENED=18:77306242-77306717;PctSeqSimilarity=0.9834;PctSizeSimilarity=0.9949;PctRecOverlap=0.1538;SizeDiff=1;StartDistance=-165;EndDistance=-165;GTMatch=0;TruScore=71;MatchId=2480.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:1:7:0:6:./.:0:2:1:7:1/1:0:8:./.:.:.:.:.:.
chr18	77344136	HG2_PB_SVrefine2PB10Xhap12_12839	C	CGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCCGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCGGGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCGGGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCACCGG	10	PASS	ClusterIDs=HG2_PB_pbsv_17668:HG3_PB_assemblyticsfalcon_12001:HG2_PB_assemblyticsfalcon_11964:HG3_PB_pbsv_17355:HG2_PB_SVrefine2Falcon1plusDovetail_5385:HG2_PB_SVrefine2PBcRplusDovetail_4931:HG2_PB_SVrefine2PB10Xhap12_12839:HG2_PB_SVrefine2Falcon2Bionano_8662:HG3_PB_SVrefine2PBcRDovetail_8604:HG2_PB_PB10Xdip_14497;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12839;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0524017;ClusterMaxSizeDiff=0.0524017;ClusterMaxEditDist=0.248908;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=230;DistBack=-1;DistForward=21;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=107;REFWIDENED=18:77344053-77344159;PctSeqSimilarity=0.9682;PctSizeSimilarity=0.9583;PctRecOverlap=0.6556;SizeDiff=-10;StartDistance=78;EndDistance=78;GTMatch=0;TruScore=86;MatchId=2481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:66:1/1:1:19:1:37:./.:0:7:1:4:1/1:0:11:./.:.:.:.:.:.
chr18	77707529	HG2_PB_SVrefine2PBcRplusDovetail_4956	T	TCCACCTCTGCTCTCCCCGTCTCCCGCCCCTTCTCACCAGAGCCCAGCCCAGCCCCACCTCTGCTCTCCCCCCCACCCACTCCCCCCAGCCCCTTCTGCCTGGACCCCGGCCCCTTCTCACCGGAGCCTGCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10989:HG3_PB_assemblyticsfalcon_12049:HG3_PB_SVrefine2Falcon1Dovetail_10983:HG2_PB_assemblyticsfalcon_11993:HG3_PB_assemblyticsfalcon_12048:HG2_PB_HySA_32191:HG2_PB_SVrefine2Falcon1plusDovetail_5411:HG3_PB_SVrefine2Falcon1Dovetail_10982:HG2_PB_pbsv_17705:HG3_PB_pbsv_17393:HG4_PB_pbsv_17617:HG3_PB_HySA_26667:HG2_PB_PB10Xdip_14552:HG2_10X_SVrefine210Xhap12_12270:HG4_PB_HySA_25731:HG4_PB_SVrefine2PBcRDovetail_8869:HG2_PB_SVrefine2PBcRplusDovetail_4956:HG2_PB_SVrefine2Falcon2Bionano_8684:HG3_PB_SVrefine2PBcRDovetail_8623:HG2_PB_SVrefine2PB10Xhap12_12870;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8684:HG2_PB_SVrefine2PBcRplusDovetail_4956:HG4_PB_SVrefine2PBcRDovetail_8869;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0530303;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.226415;PBcalls=19;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=131;DistBack=2523;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=78;REFWIDENED=18:77707530-77707607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2482.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:./.:0:0:1:1:./.:0:0:0:1:./.:0:6:./.:.:.:.:.:.
chr18	77712451	HG2_PB_SVrefine2Falcon2Bionano_8685	C	CGCGCGGGTGAGGACTGAGGGCGAGGGGCGCGTGGATGAGGGGCGCGCGGGTGAAGAGTGAGGGGAGCGCGGGTGAAGTGTGAGGGGAGCGCGGGTGAAGGGTGAGGGGCGCGCGGGTGAAGAGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAAGAGTGAGGGGCGCGCTGGTGAGGCGTGAGTGATGCGCGAGTGAAGGGTGAGGGGCGCCTGGGTGAGGGGTGAGGGGTGAGGGGCGCGCCGGTGAAGGGTGAGGGGAGCGCGGGTGAAGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10990:HG2_PB_PB10Xdip_14553:HG2_PB_pbsv_17706:HG2_PB_SVrefine2Falcon1plusDovetail_5412:HG3_PB_pbsv_17395:HG3_PB_SVrefine2Falcon1Dovetail_10984:HG2_PB_SVrefine2PB10Xhap12_12871:HG2_PB_SVrefine2Falcon2Bionano_8685:HG2_PB_SVrefine2PBcRplusDovetail_4957;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8685:HG2_PB_SVrefine2PB10Xhap12_12871;NumExactMatchSVs=2;ClusterMaxShiftDist=0.12126;ClusterMaxSizeDiff=0.107087;ClusterMaxEditDist=0.264706;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=622;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=18:77712452-77712749;PctSeqSimilarity=0.9414;PctSizeSimilarity=0.9936;PctRecOverlap=0.5375;SizeDiff=-4;StartDistance=-288;EndDistance=-288;GTMatch=0;TruScore=82;MatchId=2483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:53:./.:0:4:1:2:./.:0:0:0:0:1/1:0:8:1/1:2:30:.:1218:.
chr18	77808823	HG2_Ill_GATKHCSBGrefine_11612	A	AGCTCAGTGCCTCCTAGAAAGTGGAGTGTGGGCATGTTTGCAGGGGATCCAACCAGGCGTCG	20	PASS	ClusterIDs=HG2_PB_pbsv_17707:HG3_Ill_GATKHC_27825:HG2_PB_assemblyticsfalcon_11995:HG2_Ill_GATKHC_27942:HG2_Ill_GATKHCSBGrefine_11612;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11612:HG2_Ill_GATKHC_27942:HG2_PB_assemblyticsfalcon_11995:HG3_Ill_GATKHC_27825;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0787402;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.15748;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=61;DistBack=13559;DistForward=22325;DistMin=13559;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=306;REFWIDENED=18:77808739-77809044;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:24:./.:3:1:1:6:./.:2:0:2:0:./.:20:1:./.:.:.:.:.:.
chr19	291551	HG2_PB_PB10Xdip_14867	A	GGGGAGGGGAGGAGGGGGGGACGGCAGCGGCGGGCAGGGGAGCGGCGGGCGGGGCGGGGAGGGGAGGGCAGCAGGGGAGAGGGGAGGAGGGGAGGGGCGGGGAGGGGAGGGGAGGAGGGAGGGGGAGGGGAGGAGGGAGGGGGGACGGCAGCGGCGGGCAGGGGAGCGGCGGGCAGGGGAGCGGCGGGCGGGGCGGGGAGGAGGGGAGGGAGGGGAAGGGGAGGAGGGGGGGAGGGGAGGGGAGGAAGGCGGGGACGGCAGCGGCGGGCAGGGGAGCAGCGGGCGGGGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8626:HG3_PB_SVrefine2Falcon1Dovetail_10994:HG4_PB_SVrefine2Falcon1Dovetail_11001:HG2_PB_pbsv_17716:HG3_PB_pbsv_17403:HG4_PB_SVrefine2Falcon1Dovetail_11000:HG2_PB_SVrefine2PB10Xhap12_12881:HG2_PB_PB10Xdip_14868:HG2_PB_PB10Xdip_14867:HG2_PB_SVrefine2Falcon1plusDovetail_5422:HG2_PB_SVrefine2PBcRplusDovetail_4965:HG3_PB_SVrefine2Falcon1Dovetail_10993:HG4_PB_SVrefine2PBcRDovetail_8877;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_14867:HG2_PB_PB10Xdip_14868;NumExactMatchSVs=2;ClusterMaxShiftDist=0.277198;ClusterMaxSizeDiff=0.277198;ClusterMaxEditDist=0.372578;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=288;DistBack=76;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=202;REFWIDENED=19:291434-291635;PctSeqSimilarity=0.9363;PctSizeSimilarity=0.878;PctRecOverlap=0.8784;SizeDiff=-40;StartDistance=-5;EndDistance=-5;GTMatch=1;TruScore=89;MatchId=2486.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:42:1/1:1:6:1:19:./.:0:2:0:1:./.:0:0:./.:.:.:.:.:.
chr19	479505	HG3_PB_SVrefine2Falcon1Dovetail_11015	A	AGTGATCCTCCTGCCTCAGCCTCTCGCGTAGCTGGGATTACAGGCGTGCGCAACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGCCAGGCTGGTCTCGATCTCCTGACCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5434:HG2_PB_HySA_32231:HG2_PB_pbsv_17735:HG4_PB_HySA_25765:HG3_PB_pbsv_17429:HG2_PB_PB10Xdip_15894:HG4_PB_pbsv_17650:HG2_PB_PB10Xdip_15893:HG4_PB_SVrefine2PBcRDovetail_8884:HG4_PB_SVrefine2Falcon1Dovetail_11014:HG3_PB_SVrefine2PBcRDovetail_8638:HG3_PB_SVrefine2Falcon1Dovetail_11015:HG2_PB_SVrefine2PBcRplusDovetail_4976:HG2_PB_SVrefine2PB10Xhap12_12895;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5434:HG4_PB_SVrefine2PBcRDovetail_8884:HG4_PB_SVrefine2Falcon1Dovetail_11014:HG3_PB_SVrefine2PBcRDovetail_8638:HG3_PB_SVrefine2Falcon1Dovetail_11015:HG2_PB_SVrefine2PBcRplusDovetail_4976:HG2_PB_SVrefine2PB10Xhap12_12895;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0738007;ClusterMaxSizeDiff=0.0369004;ClusterMaxEditDist=0.306569;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=133;DistBack=5543;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=329;REFWIDENED=19:479506-479834;PctSeqSimilarity=0.9707;PctSizeSimilarity=1;PctRecOverlap=0.3383;SizeDiff=0;StartDistance=-88;EndDistance=-88;GTMatch=0;TruScore=76;MatchId=2489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:./.:0:6:0:2:./.:0:0:0:0:0/0:23:0:./.:.:.:.:.:.
chr19	544683	HG2_PB_SVrefine2Falcon1plusDovetail_5438	T	TTCCTTCCACCCATGGGTCCATCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCATCTCCCCTTCCTTCCCTCTACCCGTCCGTCCACCCATCATTCCTCCTTCCATTCTTCCACCCACCCATCCATCATCCATCCCTCTACCCATGGGTCCATCATCCATCCCTCCCTCCCTCCTTTCGTTCCCCCTTCCTTCCCTCCGCCAGTCCATCCACCCATCATTCCTCCTTCCATTCTTCCACCCATCCATCCATCATCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5438:HG2_PB_pbsv_17743:HG4_PB_pbsv_17658:HG3_PB_pbsv_17437:HG2_PB_PB10Xdip_15947:HG2_PB_PB10Xdip_15946:HG2_PB_HySA_32246:HG4_PB_SVrefine2Falcon1Dovetail_11021:HG3_PB_SVrefine2Falcon1Dovetail_11020:HG4_PB_SVrefine2Falcon1Dovetail_11020:HG3_PB_SVrefine2PBcRDovetail_8640:HG2_PB_SVrefine2PBcRplusDovetail_4982:HG2_PB_SVrefine2PB10Xhap12_12902;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5438:HG2_PB_SVrefine2PBcRplusDovetail_4982:HG2_PB_SVrefine2PB10Xhap12_12902;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0809249;ClusterMaxSizeDiff=0.0732177;ClusterMaxEditDist=0.234592;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=257;DistBack=3832;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=272;REFWIDENED=19:544684-544955;PctSeqSimilarity=0.9777;PctSizeSimilarity=0.9728;PctRecOverlap=0.6693;SizeDiff=7;StartDistance=-82;EndDistance=-82;GTMatch=0;TruScore=87;MatchId=2490.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:40:1/1:1:7:1:7:1/1:1:177:2:58:./.:0:4:./.:.:.:.:.:.
chr19	605748	HG2_PB_assemblyticsfalcon_12032	T	TGGGGACCCAGGCGCCCCCTTATGGAGGGAAGGACTCGGGCCCTTACAGAGGC	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_11877:HG2_PB_PB10Xdip_16067:HG2_PB_PB10Xdip_16066:HG2_PB_pbsv_17750:HG2_PB_HySA_32250:HG4_PB_pbsv_17666:HG3_Ill_GATKHC_27863:HG2_PB_assemblyticsfalcon_12032:HG2_PB_assemblyticsPBcR_11647:HG2_Ill_GATKHC_27966;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHC_27966:HG2_PB_assemblyticsPBcR_11647:HG2_PB_assemblyticsfalcon_12032:HG3_Ill_GATKHC_27863;NumExactMatchSVs=4;ClusterMaxShiftDist=0.168224;ClusterMaxSizeDiff=0.168224;ClusterMaxEditDist=0.288462;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=-30;DistForward=39;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=64;REFWIDENED=19:605747-605813;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2491.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:27:./.:6:17:1:2:./.:2:0:0:0:0/0:9:0:./.:.:.:.:.:.
chr19	643104	HG2_Ill_scalpel_16470	G	GGAGGGGACTCGTGGTCTGGGGCAGGGGGGGCTCCTCGTGTCTGTCGTGGTCAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8690:HG2_PB_PB10Xdip_16073:HG3_PB_pbsv_17448:HG2_PB_pbsv_17753:HG2_PB_PB10Xdip_16072:HG4_PB_assemblyticsfalcon_11885:HG4_Ill_svaba_21781:HG4_Ill_manta_4022:HG4_Ill_Krunchall_24003:HG4_Ill_GATKHC_27949:HG4_Ill_GATKHCSBGrefine_11993:HG4_Ill_Cortex_1596:HG4_Ill_250bpfermikitraw_22978:HG4_Ill_150bpfermikitraw_22092:HG3_PB_HySA_26739:HG3_Ill_svaba_22049:HG3_Ill_Spiral_18028:HG3_Ill_GATKHC_27871:HG3_Ill_GATKHCSBGrefine_11521:HG3_Ill_Cortex_1641:HG3_Ill_250bpfermikitraw_22659:HG3_Ill_150bpfermikitraw_22003:HG2_Ill_svaba_21830:HG2_Ill_scalpel_16470:HG2_Ill_manta_4736:HG2_Ill_SpiralSDKrefine_7589:HG2_Ill_Krunchall_23641:HG2_Ill_GATKHC_27974:HG2_Ill_GATKHCSBGrefine_11626:HG2_Ill_Cortex_3843:HG2_Ill_250bpfermikitraw_23316:HG2_Ill_150bpfermikitraw_21971:HG2_PB_HySA_32253:HG2_Ill_breakscan11_4815:HG4_PB_HySA_25783:HG4_PB_SVrefine2PBcRDovetail_8889:HG2_PB_SVrefine2PB10Xhap12_12911:HG2_PB_SVrefine2PBcRplusDovetail_4989;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21971:HG2_Ill_250bpfermikitraw_23316:HG2_Ill_Cortex_3843:HG2_Ill_GATKHCSBGrefine_11626:HG2_Ill_GATKHC_27974:HG2_Ill_Krunchall_23641:HG2_Ill_SpiralSDKrefine_7589:HG2_Ill_manta_4736:HG2_Ill_scalpel_16470:HG2_Ill_svaba_21830:HG3_Ill_150bpfermikitraw_22003:HG3_Ill_250bpfermikitraw_22659:HG3_Ill_Cortex_1641:HG3_Ill_GATKHCSBGrefine_11521:HG3_Ill_GATKHC_27871:HG3_Ill_Spiral_18028:HG3_Ill_svaba_22049:HG3_PB_HySA_26739:HG4_Ill_150bpfermikitraw_22092:HG4_Ill_250bpfermikitraw_22978:HG4_Ill_Cortex_1596:HG4_Ill_GATKHCSBGrefine_11993:HG4_Ill_GATKHC_27949:HG4_Ill_Krunchall_24003:HG4_Ill_manta_4022:HG4_Ill_svaba_21781:HG4_PB_assemblyticsfalcon_11885;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.240741;PBcalls=12;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=53;DistBack=-1;DistForward=17;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=81;REFWIDENED=19:643076-643156;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2492.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:./.:4:33:0:0:./.:1:20:0:4:1/1:1:37:./.:.:.:.:.:.
chr19	785388	HG3_Ill_GATKHCSBGrefine_11524	A	ATTATTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACACCACTGCACTCCAGCCTGGGCAACAGAACAAGACTCCATCTCAAAAAAAAAAAATAATAATAATAATAAATAAATAAGGGGCCGGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCATTCTCCTGCCTCAGCCTCCCGCGTAGCTGGGACTACAGGCGCCCGCCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCCCCTTATTTATTTATTATTATTTATTTATTTATTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8645:HG2_PB_pbsv_17754:HG3_PB_pbsv_17452:HG4_PB_pbsv_17670:HG4_Ill_GATKHCSBGrefine_11995:HG3_Ill_manta_3887:HG3_Ill_GATKHCSBGrefine_11524:HG2_Ill_GATKHCSBGrefine_11627:HG4_Ill_MetaSV_2288:HG3_Ill_MetaSV_2362:HG2_PB_HySA_32261:HG3_PB_HySA_26744:HG4_PB_HySA_25786:HG2_PB_SVrefine2Falcon1plusDovetail_5445:HG4_PB_SVrefine2PBcRDovetail_8891:HG4_PB_SVrefine2Falcon1Dovetail_11025:HG3_PB_SVrefine2Falcon1Dovetail_11024:HG2_PB_SVrefine2PBcRplusDovetail_4991:HG4_Ill_SVrefine2DISCOVARDovetail_12336:HG3_Ill_SVrefine2DISCOVARDovetail_12564:HG2_PB_SVrefine2Falcon2Bionano_8692:HG2_Ill_SVrefine2DISCOVARplusDovetail_5785;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11627:HG3_Ill_GATKHCSBGrefine_11524:HG3_Ill_manta_3887:HG4_Ill_GATKHCSBGrefine_11995;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0674419;ClusterMaxSizeDiff=0.0604651;ClusterMaxEditDist=0.204545;PBcalls=13;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=428;DistBack=-68;DistForward=10671;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=89;REFWIDENED=19:785368-785456;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2493.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:1/1:0:14:0:12:./.:1:6:0:6:1/1:0:31:1/1:2:63:.:.:.
chr19	844205	HG3_PB_SVrefine2Falcon1Dovetail_11031	G	GGCCACTCCTCCTCCCGCCTCTCCCCCGCCCGCGCCTCTCCCCCGCCCGCGCCTCTCCCCCGCCCGCGCCTCTCCCCTGCGCGCCTCTCCCCCGCCCGCGCCTCTCCCCCGCCCGCGCCTCTCCCCTGCCCGCGCCTCTCCCTTGCCCGCCCCTCTCCCTGCCCGCGCCTCTCCCCTGCATGCCTCTCCCTTGCCCGCCCCTCTCCCCTGCCCGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8648:HG3_PB_HySA_26748:HG2_PB_pbsv_17761:HG3_PB_SVrefine2Falcon1Dovetail_11031:HG3_PB_pbsv_17458;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11031;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0704225;ClusterMaxSizeDiff=0.0657277;ClusterMaxEditDist=0.258216;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=214;DistBack=-1;DistForward=16;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=336;REFWIDENED=19:844206-844541;PctSeqSimilarity=0.987;PctSizeSimilarity=0.9953;PctRecOverlap=0.9302;SizeDiff=-1;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=97;MatchId=2495.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:14:0|1:16:3:3:11:./.:8:14:6:1:0/1:5:3:./.:.:.:.:.:.
chr19	851457	HG2_PB_assemblyticsPBcR_11660	A	AGGGCCCTGGGTAAACTGAGGCAGGTGACACAGCTGCATGTGGCCGTATCACG	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23320:HG4_PB_assemblyticsfalcon_11895:HG3_Ill_GATKHC_27883:HG2_PB_pbsv_17762:HG2_PB_HySA_32266:HG2_PB_assemblyticsPBcR_11660:HG2_Ill_GATKHC_27980;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23320:HG3_Ill_GATKHC_27883:HG2_PB_assemblyticsPBcR_11660:HG2_Ill_GATKHC_27980;NumExactMatchSVs=4;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.314815;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=146;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=320;REFWIDENED=19:851271-851590;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2496.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:19:0|1:15:4:1:15:./.:2:2:6:0:0/1:6:3:./.:.:.:.:.:.
chr19	1142160	HG2_PB_PB10Xdip_14598	A	ACTCAATGACCTCCCTCTCATGATCAACCCTCCCTCAATGACCTCCCTCACGATCAACCCTCCCCTCAATGGCCTCCCTCCCCATGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCCCCTCAATGGCCTCCTTCCCCATGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCCCCTCAATGACCTCCTTCCCCAAGATCAACCCTCACTCAATGACCTCCTTCCCCACGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCACTCAATGACCTCCCTCCCCAAGATCAAACCTCCCCTCAATGACCTCCTTCCCCACGATCAACCCTCACTCAATGACCTCCCTCCCCACGATCAATCCTCACTCAATGACCTCCCTCCTCATGATCAACCCTCCCTCAATGACCTCCCTCACGATCAACCCTCCCCTCAATGACCTCCCTCCCCACGATCAATCCTCACTCAATGACCTCCCTCCTCATGATCAACCCTCCCCTCAATGGCCTCCCTCCTCATGATCAACCCTCCCTCAATGACCTCCCTCACGATCAACCCTCCCCTCAATGGCCTCCCTCCCCATGATCAACCCTCCCTCAATGACCTCCCTCCCCACGATCAACCCTCACTCAACGGCCTCCCTCCCCATGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCCCCTCAATGACCTCCTTCCCCATGATCAACCCTCCCTCAATGACCTCCCTCCCCAAGATCAAACCTCCCCTCAATGACATCCCTCCCCACGATCAACCCTCCCTCAATGACCTCCCTCCCCACGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCCCCTCAATGACCTCCTTCCCCAAGATCAACCCTCCCTCAATGACCTCCTTCCCCATGATCAACCCTCCCTCAATGACCTCACTCACGATCAACCCTCCCCTCAATGGCCTCCCTCCCCATGATCAACCCTCCCTCAATGACCTCCCTCACAATCAACCCTCCCCTCAATGGCCTCCTTCCCCATGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCCCCTCAATGACATCCCTCCCCACGATCAACCCTCCCCTCAATGGCCTCCCTCCCCATGATCAACCCTCCCTCAATGACCTCCCTCACGATCAACCCTCCCCTCAATGGCCTCCCTCCCCACAATCAACCCTCCCTCAATGACCTCCCTCACGATCAACCCTCCCCTCAGTGGCCTCCTTCCCCATGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCCCCTCAATGACCTCCTTCCCCAAGATCAACCCTCACTCAATGACCTCCTTCCCCACGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCCCCTCAATGACCTCCCTCCCCATGATCAACCCTCACTCAATGACCTCCTTCCCCAAGATCAACCCTCCC	10	PASS	ClusterIDs=HG4_PB_pbsv_17684:HG2_PB_PB10Xdip_14599:HG2_PB_pbsv_17772:HG2_PB_PB10Xdip_14598:HG2_PB_HySA_32278:HG2_PB_SVrefine2Falcon1plusDovetail_5447:HG2_PB_SVrefine2PB10Xhap12_12921:HG2_PB_SVrefine2Falcon2Bionano_8695:HG3_PB_SVrefine2Falcon1Dovetail_11036:HG3_PB_SVrefine2PBcRDovetail_8650:HG3_PB_SVrefine2Falcon1Dovetail_11037:HG4_PB_SVrefine2Falcon1Dovetail_11035;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_14598:HG2_PB_PB10Xdip_14599;NumExactMatchSVs=2;ClusterMaxShiftDist=0.298393;ClusterMaxSizeDiff=0.297694;ClusterMaxEditDist=0.363382;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1614;DistBack=-1;DistForward=14;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=265;REFWIDENED=19:1142017-1142281;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2498.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:42:./.:0:0:0:0:./.:0:0:0:0:./.:0:7:./.:9:126:.:6275:.
chr19	1162197	HG2_PB_PB10Xdip_14602	A	CCTGTAATCCCAGCACTTTGGGAGGTCAAGGTGGGAGAATCGCTTGAGGCCAGGAGTTCAAGACCAGCACGGGTAACATAGCAACACCTTATCTCTACAAAAAAATTTAAAAATTAGCCGGGTATGGTGCATGCACCTGTAGTCCCAGCTACCCGGGAGGCTGAGGTGGGAGGACTGCTTGAGCCCAGGAGTTTGAGGCTGCAGTGAGCTATGATCATGCCACTGCACTCCAGCCGGGGTAACAGAGCAAGACCCTGTCTCAAAAAAATAAATAAAACTTAAAAAATAAAATAAAATGATAAAAACAATGGTTACAGATGGTTTTCGAAGAAAAAAAAAAACAACACAAATACAGACTCATAGTATAGTAGGTGGCCCAGCTAGGAAAGCCACGATCCTAAAAACAGCAACACTAAGTACTGAGGAACTAGCGCACAGCCACAGACACAAGTGTGCCACGCCCACACACACCCGCACATGCATCTCAGCACACGGCCACAGACACGAGGGTGTCACACCCACACACCCGCACACACATCTCAGCACACGGCCACAGACACGAGTGTGCCACGCCCACACACACCTGTACAGGCATCCCAGTGCACAGCCACAGACACGAGTGTGTCACACCCACACACGCATCTCAGCGCACGGCCACAGACACGAGTGTGCCATGTCCACACCCAAACACGGATCTCAGCACACGGCCACAGACACGAGTGTGCCACACACCCACGCACCCACACACGCATCTCAGCGCACGGCCACAGACAAGAGTGTGCCACACACCCACGCACCCGCACACGCATCTCAGCAGACAGCCACAGACACGAGTGTGCCACGCCCACACACACCTGTACAGGCATCCCAGTGCACAGCCACAGACACGAGTGTGTCACACCCACACACGCATCTCAGCACGCGGCCACAGACACGAGTGTGCCACACCCACACACACCTGTACAGGCATCCCAGTGCACAGCCACAGACACGAGTGTGTCACACCCACACACGCATCTCAGCACACGGCCACAGACACGAGTGTGCCACACACCCACGCACCCGCACACGCATCTCGGCACACGGCCACAGACATGAGTGTGCCATGCCCACACACACCTGCACAGACATCCACACCTGCACCCACACATGAACCGACACACGCACCCCACCCACAAATGCACATAGACCCCAATGGCACCTGTGCCTGCACGGGCACCCCACCTGCACCTGCACACACACCCACCTGCATAGGCACAACCCCCCCACCCCCACGCGCACCCCACCTGCACCTGCACACACACCCACCTGCATAGGCACACCCTGCCCCACCCCCACATGCACCTGCACACACACTCACACCTGCCACCACACAATGGGGAAGGTGGCCCATGCCAGCGTCAATATCTAGTTGGTAACATTGTTCTCTCATTGTACAAGACCTTACCACTGAGGGAAACACGTGGGGGGAATCTCTTTATATCACTTCTTACCATAATTGTATCACTTCTTACCATAGCCACAAATCTGCAATTATCTCAAAAGTAAAAACTGTGGTTGGGTGTGGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGAGCAACGTGGCGAAACCCCGTCTCTACTAAACACACACACACACAAATAGCCAGTGTCGTGGTGCACACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGAGCAACAGAGTGACACTCTGTCTCAAAATAAAATAAAATAAAATAAAAATTTTAAAAAGTGTGATTCCCAGCATGAACTGGGAAAACATGTTGGGCTCATGGCTCTGCTGCCCGCCAGGCCCTCCACCAGCTGTGGGAGAAGCCGCATCCTCAGCTGCCGCAAACCTTCATGCAGGAAAAGGCCAGCCTGGCAAACCACAGGCACGCGGGTGGCACCCGGCCACACGGGCGGCAGTTCTGACCCTCATCCCCCGTGCAGCCCAAAAGCCAATCATGGGGGAGGCCCCAGGCTTGGGCCCAGACCCAGTCCTCCCTCCCCGGGCTCGCTGCCTGCTCAGAGCCCAGCCCACCCGTGAAAGGACCAGGGCACCACTGGCCCAGGCTGCGTCCAGGGAGCACGGACCCCGGGTGGACCCCCCCTTACCACAAGGCGCAGGGCCAGGTCTCCCAAGGGCACCTCGACTGGTGCACAATGACCAACATGCCGGACACCTGCACCCCAGGGGCCCCGAAAGTGGTGTGTGTGCGTCACACTCACATGCCAATGCCTGCTTCTCAGGAACCCTGAGAGTGACGTGTGACTGACACGCCAATGCCTGCGTCTCAGGATCCCTGGAGAGCCACGTGTGCGTCACGCTGACCGACACACTGATGCCTGCATCTCAGGATCCCAGAGCGCCACGTGTGCGTGTTTCCTCCCCCAGGGCCAGCTGGGTCCCCCACCCCTTGCCAAGCTGCCAGTCCATGAATGAAGAAGCTGTGGAACCGTCCATCTTCCCTCCGCCCTCCACACCCACCTGCCCACAAGTCCAGGGGTGTCCACCTAAACCGCAGCCCAGCCCGATGGGGCCGCACTTCTGCTCCAGCTCGGCAGCAGCTTAAAGACCTCAGGATGAAGACCCACAGCCCCTGGGGCCCCAGACCCCGCCTCTCCTCCAGAGGGTGCCACCCTCCCTCTCTATCCTCAGAAATGCTGTTGGGAGGCCAGGCATGGTGGCTCACACCTGTAATCCAAGCACTTTGGGAGGCCAAGGCGGGTGGATCACTGGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGCAAAACCCCATTTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGTGCGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGTCAGGAGAATCGCTTGAACCCGGGAGTTGGAGGAGACAGTGAGCCAAGATCCTACCACCGCACTCCAGCCTGGGCAACAAGAACGAAAATCCTCAAAAAAAAAAAAAAAAGGGGGGGGGGGGCCAGCCGCGGTGGCTCACG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8897:HG2_PB_pbsv_17774:HG3_PB_pbsv_17472:HG4_PB_pbsv_17686:HG2_PB_HySA_32282:HG4_PB_HySA_25795:HG4_PB_HySA_25794:HG2_PB_PB10Xdip_14603:HG2_PB_PB10Xdip_14602:HG2_PB_HySA_32281:HG2_PB_SVrefine2PBcRplusDovetail_4998:HG2_PB_SVrefine2PB10Xhap12_12923:HG2_PB_SVrefine2Falcon2Bionano_8697:HG3_PB_SVrefine2PBcRDovetail_8651:HG3_PB_SVrefine2Falcon1Dovetail_11039:HG4_PB_SVrefine2Falcon1Dovetail_11037:HG2_PB_SVrefine2Falcon1plusDovetail_5449;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_14602:HG2_PB_PB10Xdip_14603;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0559988;ClusterMaxSizeDiff=0.0559988;ClusterMaxEditDist=0.187657;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=3126;DistBack=4308;DistForward=270;DistMin=270;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=282;REFWIDENED=19:1162188-1162469;PctSeqSimilarity=0.9994;PctSizeSimilarity=0.9987;PctRecOverlap=0.9987;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2499.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:80:./.:0:0:0:0:./.:0:0:0:0:1/1:1:19:1/1:1:242:.:6275:.
chr19	1278174	HG4_Ill_250bpfermikitraw_22990	A	ACTGACTGCAGGATGCTTCTGAGCAGGCAGGGTCAGGGAGGGCCTCTCTCTGTGTGTAATGGGG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_14609:HG4_PB_HySA_25798:HG2_PB_pbsv_17781:HG4_PB_pbsv_17694:HG2_PB_HySA_32289:HG3_PB_assemblyticsfalcon_12129:HG2_PB_assemblyticsPBcR_11677:HG3_PB_HySA_26752:HG4_Ill_svaba_21800:HG4_Ill_manta_4025:HG4_Ill_Krunchall_24014:HG4_Ill_GATKHC_27969:HG4_Ill_GATKHCSBGrefine_12002:HG4_Ill_Cortex_1599:HG4_Ill_250bpfermikitraw_22990:HG4_Ill_150bpfermikitraw_22103:HG3_Ill_svaba_22072:HG3_Ill_manta_3890:HG3_Ill_Spiral_18042:HG3_Ill_Krunchall_23251:HG3_Ill_GATKHC_27895:HG3_Ill_GATKHCSBGrefine_11531:HG3_Ill_Cortex_1645:HG3_Ill_250bpfermikitraw_22675:HG3_Ill_150bpfermikitraw_22020:HG2_Ill_svaba_21852:HG2_Ill_manta_4740:HG2_Ill_SpiralSDKrefine_7604:HG2_Ill_Krunchall_23657:HG2_Ill_GATKHC_27994:HG2_Ill_GATKHCSBGrefine_11635:HG2_Ill_Cortex_3846:HG2_Ill_250bpfermikitraw_23334:HG2_Ill_150bpfermikitraw_21985:HG2_Ill_breakscan11_4816:HG2_PB_PB10Xdip_14610;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21985:HG2_Ill_250bpfermikitraw_23334:HG2_Ill_Cortex_3846:HG2_Ill_GATKHCSBGrefine_11635:HG2_Ill_GATKHC_27994:HG2_Ill_Krunchall_23657:HG2_Ill_SpiralSDKrefine_7604:HG2_Ill_manta_4740:HG2_Ill_svaba_21852:HG3_Ill_150bpfermikitraw_22020:HG3_Ill_250bpfermikitraw_22675:HG3_Ill_Cortex_1645:HG3_Ill_GATKHCSBGrefine_11531:HG3_Ill_GATKHC_27895:HG3_Ill_Krunchall_23251:HG3_Ill_Spiral_18042:HG3_Ill_manta_3890:HG3_Ill_svaba_22072:HG4_Ill_150bpfermikitraw_22103:HG4_Ill_250bpfermikitraw_22990:HG4_Ill_Cortex_1599:HG4_Ill_GATKHCSBGrefine_12002:HG4_Ill_GATKHC_27969:HG4_Ill_Krunchall_24014:HG4_Ill_manta_4025:HG4_Ill_svaba_21800;NumExactMatchSVs=26;ClusterMaxShiftDist=0.046875;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.212121;PBcalls=9;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=63;DistBack=31728;DistForward=62;DistMin=62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=65;REFWIDENED=19:1278175-1278239;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2500.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:54:1/1:3:35:0:6:1/1:0:12:1:18:1/1:0:55:./.:.:.:.:.:.
chr19	1282051	HG2_PB_SVrefine2PB10Xhap12_12929	A	AAGGTGGGATGAGGGAGAGAGGAAGGAGGAGGAAGGGGAGGAGGGAGGGGACAGAGTGGGAAGGAGAAGGATGTGAATGGAGAGGAAGGATGGGAGGAGGAAGGAAGGAAGGAGGGAAGGGGAGGAGGAGGAAGGAGAGGAGGGTGCAGAGGATGGGGGAAGGAGGGGGGAGGAGGGTGTGAAGGGGAAGGAGGGAGGAGGGAGCGGAGGACTGAGAAGGGGAGGAAGGTGTAAAAGGAGAGGGAGAGAGGAAGGAAGGGAGGGGGTATTAAGGGGGAAGAGAGTGGGAAGGGGGAGGAGGGAGGGGAGGGTAGTATGAAGGGGGAAGGAAGGAGGGAGGGGAGAAGGGTGGGAAAGGGAGGAAGGAGAGAGGAAGGGAGGAGGGAGGGGAAGGTGTGAAGGGAAGGAGGGAGGGGAGATGGGAGGGAAGTAGGGAGGGGAGGGAGGGGAAAGGTGTGAAGGGAAGAGGGAGGGGAGGTGGGAGGGGAGGAGGGAGGGAGGGAGGAGGGTGTGAAGGGAGGAGGGGGGAGGGTGTGAAGGGAAGAGGGAGGGGAGGAGGGAGGGAGGAGGGTGTGAAGGGAGGAGGGAGGGGAGGAGGGTGTGAAGGGAGGAAGGAGGGGAGGAGAGGGAGGAGGGTGTGAAGGGAGGAGGGAGGGGAGGAGGGAGGGAGGAGGGTGTGAAGGGAGGAGGGAGGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8703:HG2_PB_PB10Xdip_14612:HG2_PB_pbsv_17782:HG4_PB_pbsv_17695:HG2_PB_PB10Xdip_14611:HG2_PB_SVrefine2Falcon1plusDovetail_5454:HG3_PB_SVrefine2Falcon1Dovetail_11043:HG4_PB_SVrefine2Falcon1Dovetail_11042:HG4_PB_SVrefine2PBcRDovetail_8901:HG3_PB_SVrefine2PBcRDovetail_8655:HG2_PB_SVrefine2PBcRplusDovetail_5004:HG2_PB_SVrefine2PB10Xhap12_12929;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12929:HG2_PB_SVrefine2PBcRplusDovetail_5004:HG3_PB_SVrefine2PBcRDovetail_8655;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0621762;ClusterMaxSizeDiff=0.0606958;ClusterMaxEditDist=0.266768;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=695;DistBack=3812;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=682;REFWIDENED=19:1282052-1282733;PctSeqSimilarity=0.9713;PctSizeSimilarity=0.9698;PctRecOverlap=0.5942;SizeDiff=21;StartDistance=-272;EndDistance=-272;GTMatch=0;TruScore=84;MatchId=2501.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:./.:0:16:1:3:1/1:0:76:0:43:./.:0:0:./.:2:24:.:.:.
chr19	1327806	HG4_PB_SVrefine2PBcRDovetail_8902	C	CTTTTATTTATTTATTTATTTATTTATTTTTTGAGACAGAGTCTTTCTCTGTAACCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAACCTCCACCTTCCGGATTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCTGCCACCACGCCCGGCTAATTTTTTTCTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCCTGATCTGCCTGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCCCACTTTATTTTTTAAAATTATTTTTTATTTGACTGGGCACGGTGGATCATGCCTGTAATCCTAGCACTTTGGGAGGCCGAGGTGGGTGGATCACGAGGTCAGGAGTTTGAGACCAGCCTGATCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAATAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTGCTCCGGAGGCTGAGGCAGGAGAAAGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCATCTCAAAAAAATTAAATAAATAAATACAACTATTATTTATTTA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5790:HG3_PB_HySA_26755:HG3_PB_pbsv_17481:HG2_PB_pbsv_17783:HG2_PB_PB10Xdip_14619:HG3_Ill_MetaSV_2368:HG3_Ill_GATKHCSBGrefine_11532:HG4_Ill_GATKHCSBGrefine_12003:HG2_Ill_GATKHCSBGrefine_11636:HG2_PB_HySA_32292:HG4_PB_HySA_25803:HG4_PB_pbsv_17696:HG4_PB_SVrefine2Falcon1Dovetail_11043:HG3_Ill_SVrefine2DISCOVARDovetail_12569:HG4_PB_SVrefine2PBcRDovetail_8902:HG4_Ill_SVrefine2DISCOVARDovetail_12344:HG3_PB_SVrefine2PBcRDovetail_8656:HG3_PB_SVrefine2Falcon1Dovetail_11044:HG2_PB_SVrefine2PBcRplusDovetail_5005:HG2_PB_SVrefine2PB10Xhap12_12930:HG2_PB_SVrefine2Falcon2Bionano_8704:HG2_PB_SVrefine2Falcon1plusDovetail_5455;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5790:HG4_PB_SVrefine2PBcRDovetail_8902:HG4_Ill_SVrefine2DISCOVARDovetail_12344:HG3_PB_SVrefine2PBcRDovetail_8656:HG3_PB_SVrefine2Falcon1Dovetail_11044:HG2_PB_SVrefine2PBcRplusDovetail_5005:HG2_PB_SVrefine2PB10Xhap12_12930:HG2_PB_SVrefine2Falcon2Bionano_8704:HG2_PB_SVrefine2Falcon1plusDovetail_5455;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0519673;ClusterMaxSizeDiff=0.0489978;ClusterMaxEditDist=0.238545;PBcalls=15;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=660;DistBack=1734;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=307;REFWIDENED=19:1327807-1328113;PctSeqSimilarity=0.9824;PctSizeSimilarity=1;PctRecOverlap=0.8411;SizeDiff=0;StartDistance=-105;EndDistance=-105;GTMatch=0;TruScore=94;MatchId=2502.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:15:0:16:1/1:0:10:0:6:1/1:0:36:1/1:4:82:.:.:.
chr19	1744598	HG3_Ill_250bpfermikitraw_22686	C	CCCCCCTCCCCTTCCTCCCCTTTCTCACCCTCCTCCCATCCCCCCTCTGCTTCTT	20	PASS	ClusterIDs=HG3_Ill_250bpfermikitraw_22686:HG3_Ill_GATKHC_27903:HG3_PB_HySA_26765:HG3_PB_pbsv_17489:HG2_PB_HySA_32312:HG2_PB_pbsv_17789:HG3_Ill_Krunchall_23259;NumClusterSVs=7;ExactMatchIDs=HG3_Ill_250bpfermikitraw_22686:HG3_Ill_Krunchall_23259;NumExactMatchSVs=2;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.324324;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=22427;DistForward=23;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=19:1744573-1744674;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2503.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:33:./.:10:4:2:26:./.:2:0:1:8:0/1:9:4:./.:.:.:.:.:.
chr19	1766440	HG4_Ill_GATKHC_27978	G	GGGGAGAGAAGGAGGAGGAGGGGGAGAGGGAAGGAAGGGAAGTGAGGGAAGGAAGGGGAAGAGGGGAGGGAGGTAAAGAGA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23345:HG4_PB_pbsv_17702:HG2_PB_pbsv_17790:HG2_10X_SVrefine210Xhap12_12308:HG4_PB_HySA_25820:HG4_Ill_GATKHC_27978:HG2_PB_HySA_32313:HG2_Ill_SVrefine2DISCOVARplusDovetail_5794;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23345:HG4_Ill_GATKHC_27978:HG2_PB_HySA_32313:HG2_Ill_SVrefine2DISCOVARplusDovetail_5794;NumExactMatchSVs=4;ClusterMaxShiftDist=0.140351;ClusterMaxSizeDiff=0.128655;ClusterMaxEditDist=0.19883;PBcalls=4;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=80;DistBack=2;DistForward=58;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=92;REFWIDENED=19:1766441-1766532;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2504.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:17:1|0:3:10:13:3:1|0:1:21:7:0:0/1:12:9:./.:.:.:.:.:.
chr19	1768904	HG2_Ill_GATKHC_28003	G	GTGGAGGTGGAGGTGGTGGAGGTGAAGGTGGAGGAGGTAGAGGTAGAGGTGCTGGAGGTGGACGTAATGGAGGTGGAAGTGGAGGTGGAGGTGA	20	PASS	ClusterIDs=HG2_Ill_GATKHC_28003:HG3_Ill_GATKHC_27904:HG2_Ill_GATKHC_28004:HG3_PB_assemblyticsfalcon_12144:HG2_PB_assemblyticsPBcR_11689:HG2_PB_PB10Xdip_14666:HG2_PB_PB10Xdip_14665:HG3_PB_pbsv_17490:HG4_Ill_GATKHC_27979:HG4_PB_pbsv_17703:HG2_PB_HySA_32314;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHC_28003:HG4_Ill_GATKHC_27979;NumExactMatchSVs=2;ClusterMaxShiftDist=0.189944;ClusterMaxSizeDiff=0.189944;ClusterMaxEditDist=0.26738;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=93;DistBack=111;DistForward=70;DistMin=70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=491;REFWIDENED=19:1768793-1769283;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2505.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:37:1/1:1:19:2:15:./.:24:108:7:32:./.:2:3:./.:.:.:.:.:.
chr19	2037236	HG2_PB_PB10Xdip_14718	G	GCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCATCCGGCTGATATCCTGTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGAGCAGATCACAAGGTCAGGATTTCGAGACCAGCCTGGCTAATATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGCGTGGTGGCACATGCCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGACTCTCTTGAACCCGGGAGGCATAGGTTGCAGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGCAATAGAGCAAGACTCCGTTTCAAAAAAAAAAAAAAAAAAAAGGCAGCTGAGCCCTGCAATGGAGTCACCCCAGCTCGCAGGAATGAGGCCACCTGTGTATGAAGAGCTCAGCTTTTTTTTTTTTTTTTTTTTGAGGTGGACTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCATTGCAAACTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCATCACGCCGGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTTATTAGGCTGGTCTAGAACTGCTGACCTCGTGATCTGCCCGCCTCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8711:HG2_PB_pbsv_17795:HG3_PB_pbsv_17497:HG2_PB_HySA_32322:HG4_PB_pbsv_17710:HG3_PB_HySA_26773:HG4_PB_HySA_25824:HG4_Ill_MetaSV_2295:HG3_Ill_MetaSV_2371:HG3_Ill_GATKHCSBGrefine_11538:HG2_PB_PB10Xdip_14719:HG2_PB_PB10Xdip_14718:HG2_Ill_breakscan11_4817:HG4_PB_SVrefine2Falcon1Dovetail_11053:HG3_PB_SVrefine2Falcon1Dovetail_11052:HG3_PB_SVrefine2PBcRDovetail_8667:HG2_PB_SVrefine2PBcRplusDovetail_5013:HG2_PB_SVrefine2PB10Xhap12_12945:HG2_Ill_SVrefine2DISCOVARplusDovetail_5799:HG2_PB_SVrefine2Falcon1plusDovetail_5463:HG2_10X_SVrefine210Xhap12_12311;NumClusterSVs=21;ExactMatchIDs=HG2_PB_PB10Xdip_14718:HG2_PB_PB10Xdip_14719;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0981341;ClusterMaxSizeDiff=0.0981341;ClusterMaxEditDist=0.249827;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=710;DistBack=-41;DistForward=18846;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=19:2037237-2037236;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9972;PctRecOverlap=0.9972;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2506.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:1/1:0:14:0:15:1/1:1:13:1:10:1/1:1:22:1/1:6:98:.:760:.
chr19	2247127	HG3_Ill_150bpfermikitraw_22032	G	GCCCCCCCCAAGTCGGAGCCAGAAGGATCTGCACAGGCCGGGCAGGATGCCCCTCCCATCAGGCTTGGGGTCCCCCGGGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11054:HG4_Ill_scalpel_16115:HG2_PB_pbsv_17797:HG4_Ill_manta_4030:HG4_Ill_Krunchall_24030:HG4_Ill_GATKHC_27989:HG4_Ill_GATKHCSBGrefine_12011:HG4_Ill_Cortex_1602:HG4_Ill_250bpfermikitraw_23005:HG4_Ill_150bpfermikitraw_22115:HG3_Ill_Krunchall_23266:HG3_Ill_GATKHC_27911:HG3_Ill_GATKHCSBGrefine_11539:HG3_Ill_Cortex_1648:HG3_Ill_250bpfermikitraw_22690:HG3_Ill_150bpfermikitraw_22032:HG2_Ill_scalpel_16497:HG2_Ill_manta_4744:HG2_Ill_Krunchall_23670:HG2_Ill_GATKHC_28013:HG2_Ill_GATKHCSBGrefine_11642:HG2_Ill_Cortex_3848:HG2_Ill_250bpfermikitraw_23352:HG2_Ill_150bpfermikitraw_21996:HG2_PB_PB10Xdip_14766:HG2_PB_PB10Xdip_14765:HG3_PB_pbsv_17499:HG3_PB_HySA_26775:HG2_PB_HySA_32326:HG4_PB_HySA_25826:HG4_PB_pbsv_17712:HG4_Ill_SVrefine2DISCOVARDovetail_12354:HG3_Ill_SVrefine2DISCOVARDovetail_12579:HG2_PB_SVrefine2PBcRplusDovetail_5015:HG2_PB_SVrefine2PB10Xhap12_12947:HG2_PB_SVrefine2Falcon2Bionano_8713:HG2_PB_SVrefine2Falcon1plusDovetail_5465:HG2_Ill_SVrefine2DISCOVARplusDovetail_5801:HG2_10X_SVrefine210Xhap12_12314:HG3_PB_SVrefine2PBcRDovetail_8669;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21996:HG2_Ill_250bpfermikitraw_23352:HG2_Ill_Cortex_3848:HG2_Ill_GATKHCSBGrefine_11642:HG2_Ill_GATKHC_28013:HG2_Ill_Krunchall_23670:HG2_Ill_manta_4744:HG2_Ill_scalpel_16497:HG3_Ill_150bpfermikitraw_22032:HG3_Ill_250bpfermikitraw_22690:HG3_Ill_Cortex_1648:HG3_Ill_GATKHCSBGrefine_11539:HG3_Ill_GATKHC_27911:HG3_Ill_Krunchall_23266:HG4_Ill_150bpfermikitraw_22115:HG4_Ill_250bpfermikitraw_23005:HG4_Ill_Cortex_1602:HG4_Ill_GATKHCSBGrefine_12011:HG4_Ill_GATKHC_27989:HG4_Ill_Krunchall_24030:HG4_Ill_manta_4030:HG4_Ill_scalpel_16115;NumExactMatchSVs=22;ClusterMaxShiftDist=0.127389;ClusterMaxSizeDiff=0.11465;ClusterMaxEditDist=0.304878;PBcalls=14;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=79;DistBack=6;DistForward=33974;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=108;REFWIDENED=19:2247065-2247172;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2507.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:3:26:./.:0:4:0:6:1/1:0:11:1:6:1/1:2:50:./.:.:.:.:.:.
chr19	2480772	HG2_PB_SVrefine2PBcRplusDovetail_5021	A	AGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGGACTGTGGGAGGCCGAGGTGGGCGGATCATGTGAGGTCAAGAGTTCGAGACCAGCCTGGCCAAGAGGGTGAAACCCTGTCTCTACTAAAAATACGAAAGTTAGCTGGGTGTGGTGGCGTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGCAGAGATACTGCCACTGCGCTCTGTCTCAAAAAAAAAAAAAAGAAAAAAAATTAAAAAAGAAAAACAACAAAAAAGAAGCAGGGTCATGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGACCGTGGCTCACTGCAGCCTCGACCTCCTGGGCTCAAGCAATCCTCCAGCCTCAGCCTCCTGAGTAGCTGGGACTAAAGGTGCACACCACCATGCCTAGCTATTTGTTACTTTTTTTTGTAGAAATGGGGTCTCACT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11059:HG3_PB_pbsv_17507:HG2_PB_pbsv_17804:HG4_PB_pbsv_17720:HG2_PB_HySA_32339:HG2_PB_PB10Xdip_14817:HG2_PB_PB10Xdip_14816:HG4_Ill_MetaSV_2298:HG4_Ill_GATKHCSBGrefine_12013:HG3_Ill_GATKHCSBGrefine_11541:HG2_Ill_MetaSV_2228:HG2_Ill_GATKHCSBGrefine_11645:HG3_Ill_MetaSV_2372:HG3_PB_SVrefine2Falcon1Dovetail_11060:HG4_PB_SVrefine2PBcRDovetail_8911:HG4_Ill_SVrefine2DISCOVARDovetail_12357:HG3_Ill_SVrefine2DISCOVARDovetail_12581:HG2_PB_SVrefine2PBcRplusDovetail_5021:HG2_PB_SVrefine2PB10Xhap12_12954:HG2_PB_SVrefine2Falcon2Bionano_8718:HG2_Ill_SVrefine2DISCOVARplusDovetail_5805:HG2_10X_SVrefine210Xhap12_12322:HG2_PB_SVrefine2Falcon1plusDovetail_5469;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12322:HG2_Ill_SVrefine2DISCOVARplusDovetail_5805:HG2_PB_SVrefine2Falcon2Bionano_8718:HG2_PB_SVrefine2PB10Xhap12_12954:HG2_PB_SVrefine2PBcRplusDovetail_5021:HG3_Ill_SVrefine2DISCOVARDovetail_12581:HG4_Ill_SVrefine2DISCOVARDovetail_12357:HG4_PB_SVrefine2PBcRDovetail_8911;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0980188;ClusterMaxSizeDiff=0.0564263;ClusterMaxEditDist=0.216842;PBcalls=13;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=467;DistBack=16515;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=19:2480773-2470998;PctSeqSimilarity=0.9799;PctSizeSimilarity=0.9957;PctRecOverlap=0.6638;SizeDiff=2;StartDistance=-156;EndDistance=-156;GTMatch=0;TruScore=87;MatchId=2509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:21:0:25:./.:0:4:0:5:1/1:0:24:1/1:2:38:.:.:.
chr19	3127976	HG2_PB_SVrefine2PBcRplusDovetail_5031	T	TTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGCTCAGGCTGGAGTACAATGGTGCAATCTCTACTCACCTCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCACCCGAGTAGCTGGGATTACAGGCGCGTGCCACCAGGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTGCTGACCTCGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGTCTGGCTGATTTTTAGGATTTAAAAAGTCCATTGTAAATCTATAAAGAAAAGCAAGGAAGAAGGAACATTACATAATAAATAGTAAGAGGATGAATTCACCAAAAGGACATATTAATCCTTTTTTTTTTTGAGACGGGGTCTTGCTTTGTCACCCCGGCTGGAGTGCAGTGGTGTGATCTTGCCTCACTGCAACCTCCACCTCTTGGGCTCAAGTGATCCTCCCACCTCAGCCTCCCGAGTAGCTGGGACCAGAAGCGCATGCCACCATGGCTGGCTAATTTTTTGTATTTTTGGTAGAGACGGGGTCTCACCATGTTGCCCAGGCTGGTCTCAAACTCCTGAGCTCAAGCAATCTGCCCACCATGGCCTCCCAAAGTGTGGGGATTACAGGCGTGAGCCACTATGCCCGGCAGGACATATTAATCCTAAATGTGTATTTACAAACTATATGAAGCAAAAATGGATGGAATTAAAAGAAGAAATATTGGGAGGCCAAGGCCGGTGAATCACGAGGTCAGGAGTTCGAGACCAGCCTTCACCAAGTTGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGTATAATGGCAGGCGACTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGGTTCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAGAAATAGACAAATCTACAATTATGCTTCCAGACTTCAACGACTTTAACACTTCTCTCTCAGTAACCAATAGGAGAAGCAGACTGAAAATCAGCAAGAATACAGAAGATCTGAATGCCACCGTCGACCACACTGACCTAATTGACATTTATATAGAACACCCCAATGAACAACAGCAGAATATACGTTCTTTTCTCGTCTTTTTCTCTGAAAAGAAGGGTCTTGTTGTGTCTTGCAGGCTGGAGTGTGCAGTGGCTCACTGCCTCTTCTAATTCCTGAGCTCAAACGATCTTCCTGCCCCACCTCCTGAGTAGCTGGGACTATAGGCATGTCCCACCACACCTGGCTAATTTTTCAATTTTTTGAGGAGATGGGGTCTTACCAAGTTCCCCAGGCTGGTTTCAATATCCTGGGCTCAAGCAGTCTTGCTGCCTCAGCCTCCCAAAGTGCTGGGATTACGGCCGTGAGCCACAGTGCCCGGCCTGTATGTTCTTTCCAAAAGCACATGTGATATTCACCAAGATAGGCCATATTCTGGGTCACAAAGCAAATCTTATCAAATTTAAAATAACTGAAATCAGGCCGGGTGTGGTGGCTCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATAGCCTGAACCCAGGAGGCAAAGGTTGCAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTGGCAACAGAGCAAGATTCCATCTCAAATAAATAAATAAAAATAAAATAATTGAAATCATTCAAAGCATGTTCTTTGACCATAACAGAATCAAACTAGAAATCAATAACAGAATGATTGGTATTTGAAAAGTCTTTAAATATTTGAGAGTTAAGCAACTCATTACTAAAGGGGTTAAAGAGGAAGCCTCAAGGGAAATTAGAAAAGACATTGAACTGAATGGAAATGAAAATACAACTTACCAAAATGCGTGGGATGCAGCTAAAGCAGTGATTAGAGAAATATTTATAACATTAAAATACTTATATCGGAAAAGAAGAAAGGTCTAATATATATA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5479:HG2_PB_pbsv_17815:HG3_PB_pbsv_17520:HG4_PB_HySA_25845:HG3_PB_HySA_26802:HG2_PB_PB10Xdip_14889:HG2_PB_PB10Xdip_14888:HG4_PB_pbsv_17731:HG2_Ill_SVrefine2DISCOVARplusDovetail_5810:HG2_10X_SVrefine210Xhap12_12337:HG4_PB_SVrefine2PBcRDovetail_8915:HG3_Ill_SVrefine2DISCOVARDovetail_12585:HG2_PB_SVrefine2PBcRplusDovetail_5031:HG3_PB_SVrefine2PBcRDovetail_8679:HG2_PB_SVrefine2PB10Xhap12_12966:HG4_Ill_SVrefine2DISCOVARDovetail_12367:HG2_10X_SVrefine210Xhap12_12336:HG3_PB_SVrefine2Falcon1Dovetail_11068:HG4_PB_SVrefine2Falcon1Dovetail_11068:HG2_PB_SVrefine2Falcon2Bionano_8726;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5031:HG3_Ill_SVrefine2DISCOVARDovetail_12585;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0550977;ClusterMaxSizeDiff=0.0522722;ClusterMaxEditDist=0.25823;PBcalls=15;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=2074;DistBack=2567;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=290;REFWIDENED=19:3127977-3128266;PctSeqSimilarity=0.9979;PctSizeSimilarity=1;PctRecOverlap=0.9836;SizeDiff=0;StartDistance=-34;EndDistance=-34;GTMatch=0;TruScore=99;MatchId=2511.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:1/1:0:16:0:23:./.:0:1:1:0:1/1:0:20:1/1:15:310:.:2050:.
chr19	3145544	HG2_PB_SVrefine2PBcRplusDovetail_5032	C	CTTTTTTTATTTTTTTATTTTTGAGATAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCTAGGTTGAAGCAATTTTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACTGGCGCCCACGACCACGCCCAGCTAATTTTTGTATTTTTAGTAGTAATTTTTGTATTTCACCATATTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCTGGCCCCTGATACCTTTTCCTCCCTAAATACTCAGCGAGTTTGAGTTGCACTGAGAAGGAAAAACACTGCGGGACCTTGATCAAAAGCATGACACAGTGCCCTCCGCTAACACACAGTCCTGATTTGCAATTTGCCAGTTTTCCCAATTTCCGTGTGAATGTCCTTTACAGCAAGAGAAAAGCCTTTTTCTTTATTCCTTTTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5480:HG3_PB_HySA_26805:HG3_PB_pbsv_17521:HG4_PB_HySA_25847:HG4_PB_pbsv_17732:HG2_PB_HySA_32356:HG2_PB_PB10Xdip_14891:HG2_PB_pbsv_17816:HG2_PB_PB10Xdip_14890:HG4_PB_SVrefine2PBcRDovetail_8916:HG4_PB_SVrefine2Falcon1Dovetail_11069:HG4_Ill_SVrefine2DISCOVARDovetail_12368:HG2_PB_SVrefine2PBcRplusDovetail_5032:HG2_PB_SVrefine2PB10Xhap12_12967:HG2_PB_SVrefine2Falcon2Bionano_8727:HG2_Ill_SVrefine2DISCOVARplusDovetail_5811:HG2_10X_SVrefine210Xhap12_12338:HG3_PB_SVrefine2Falcon1Dovetail_11069:HG3_Ill_SVrefine2DISCOVARDovetail_12586:HG3_PB_SVrefine2PBcRDovetail_8680:HG3_PB_HySA_26804;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12338:HG2_Ill_SVrefine2DISCOVARplusDovetail_5811:HG2_PB_SVrefine2Falcon2Bionano_8727:HG2_PB_SVrefine2PB10Xhap12_12967:HG2_PB_SVrefine2PBcRplusDovetail_5032:HG4_Ill_SVrefine2DISCOVARDovetail_12368:HG4_PB_SVrefine2Falcon1Dovetail_11069:HG4_PB_SVrefine2PBcRDovetail_8916;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0744368;ClusterMaxSizeDiff=0.072478;ClusterMaxEditDist=0.305609;PBcalls=17;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=506;DistBack=186;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=296;REFWIDENED=19:3145545-3145840;PctSeqSimilarity=0.9935;PctSizeSimilarity=0.9961;PctRecOverlap=0.9371;SizeDiff=-2;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=97;MatchId=2512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:45:1/1:0:19:0:18:./.:0:1:1:2:./.:0:8:1/1:3:61:.:.:.
chr19	3235492	HG2_Ill_SVrefine2DISCOVARplusDovetail_5815	A	ATGGGTGGGTGGGTGGATGGATGGATGGATTGGTGGATGGATGAATGTGTGGACAGATGGATGGGTGGATGGATGAATGGGTGGATGGATGGATGGGTGTGTGGTTGGATGGATGGATGGATGGATGGATGGATAGAAGGGTGGGTAGGAGGATGAGTGGATGGATGGGTGGATGGATAGATGGGTGGATGGGTGGATGAATGATGGGTGGATGGGTGAGTGGGTGGATATATGGGTGGGTGGATTGGTGAATGAATTGTGGGTGGATAGGTGGGTGGGTGGATGGGTGGATGGTGGGTGGTGGGTGAATGGGTGTGTATTTGGGTGAGTGAGTAGGTGGATGGATGGATGGGTGGATGAATAGGTGGGTGGGTGGATGGATGAATGAATGGATGGATGGATGAATAGGTGGGTGGG	20	PASS	ClusterIDs=HG2_PB_pbsv_17821:HG4_Ill_manta_4032:HG3_PB_pbsv_17524:HG4_Ill_GATKHCSBGrefine_12022:HG4_PB_pbsv_17738:HG2_Ill_GATKHCSBGrefine_11654:HG2_PB_HySA_32363:HG2_Ill_breakscan11_4819:HG2_PB_PB10Xdip_15116:HG2_PB_PB10Xdip_15115:HG3_PB_SVrefine2Falcon1Dovetail_11074:HG4_PB_SVrefine2Falcon1Dovetail_11074:HG2_PB_SVrefine2PBcRplusDovetail_5036:HG2_PB_SVrefine2PB10Xhap12_12971:HG2_PB_SVrefine2Falcon2Bionano_8731:HG2_PB_SVrefine2Falcon1plusDovetail_5485:HG2_Ill_SVrefine2DISCOVARplusDovetail_5815:HG4_PB_SVrefine2PBcRDovetail_8920;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5815:HG2_PB_SVrefine2Falcon1plusDovetail_5485:HG2_PB_SVrefine2Falcon2Bionano_8731:HG2_PB_SVrefine2PB10Xhap12_12971:HG2_PB_SVrefine2PBcRplusDovetail_5036:HG4_PB_SVrefine2Falcon1Dovetail_11074;NumExactMatchSVs=6;ClusterMaxShiftDist=0.267753;ClusterMaxSizeDiff=0.267753;ClusterMaxEditDist=0.293364;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=416;DistBack=9038;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=438;REFWIDENED=19:3235493-3235930;PctSeqSimilarity=0.9954;PctSizeSimilarity=1;PctRecOverlap=0.964;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=98;MatchId=2513.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:32:1/1:0:14:1:7:1/1:2:385:6:232:1/1:0:10:1/1:2:60:.:.:.
chr19	3287286	HG2_PB_SVrefine2PB10Xhap12_12972	G	GGTGGCTCATGCCTGTAATCCTAGCATTTTGGGAGGCTAAGGCAGGTGAATTGCCTGAGCTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCGAAACCCTTTCTCTACTAAAAATTCAAAAAATTAGCTGAGCGTGGTGGTGTGTGCCTGTAATCCCAACTACTGGGGAAGCTAAGGCACAAGAATCGCTTGAACCCAGGAGGCAGAGTTTGCAGTGAGTCAAGATGATGCCACTTCACTCCAGTGTGGGTGACAGAGCAAGACTCTGTCTCAAAAAAAAATAATAAAAATAAAAATTAAAAAAATATGGTCAGGTGCA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5817:HG4_PB_SVrefine2Falcon1Dovetail_11075:HG3_PB_SVrefine2Falcon1Dovetail_11075:HG4_PB_SVrefine2PBcRDovetail_8921:HG2_Ill_SVrefine2DISCOVARplusDovetail_5818:HG2_Ill_Spiral_1160:HG4_Ill_Spiral_1370:HG3_Ill_Spiral_18058:HG4_PB_pbsv_17739:HG2_PB_pbsv_17822:HG2_PB_HySA_32364:HG4_PB_HySA_25852:HG4_Ill_manta_4033:HG4_Ill_MetaSV_2301:HG4_Ill_GATKHCSBGrefine_12023:HG2_Ill_manta_4747:HG2_Ill_MetaSV_2233:HG2_Ill_GATKHCSBGrefine_11655:HG3_PB_HySA_26809:HG3_PB_pbsv_17526:HG2_PB_PB10Xdip_15122:HG4_Ill_SVrefine2DISCOVARDovetail_12373:HG2_PB_SVrefine2PBcRplusDovetail_5037:HG2_PB_SVrefine2PB10Xhap12_12972:HG2_PB_SVrefine2Falcon2Bionano_8732:HG2_PB_SVrefine2Falcon1plusDovetail_5486;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5817:HG4_Ill_SVrefine2DISCOVARDovetail_12373:HG2_PB_SVrefine2PBcRplusDovetail_5037:HG2_PB_SVrefine2PB10Xhap12_12972:HG2_PB_SVrefine2Falcon2Bionano_8732:HG2_PB_SVrefine2Falcon1plusDovetail_5486;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0556414;ClusterMaxSizeDiff=0.0527132;ClusterMaxEditDist=0.212963;PBcalls=14;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=319;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=400;REFWIDENED=19:3287287-3287686;PctSeqSimilarity=0.9791;PctSizeSimilarity=1;PctRecOverlap=0.8025;SizeDiff=0;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=92;MatchId=2514.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:40:1/1:7:29:0:8:./.:1:0:0:3:1/1:0:26:1/1:1:46:.:.:.
chr19	3742668	HG2_Ill_GATKHCSBGrefine_11663	T	TGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACTGTGAAACCCCGTCTCTACTAAAAACACAAAAAATTAGCCGGGCGTGGTCGAGGGCGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAACAAACAAAAAAAAAGAAATACAAGGCCACACAGTTAATTTCTTTCTTTCTTTTTTTTTTTTTTGAGACAGTGTCTCGCTTTGTCACTCAGGCTGGAGTGTAGTGGTGTGATCTCGGCTCACTGCAACCTCCACCCCCTGGGTTCAAGCGATTCTCGTGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGCGCCTGCCACCACGCCTGGCTAATTTTTGTATTGTTAGTAGAGACGGGGTTTCACTATGTTGGCCAGGACGGTCTTGATCTCTTGACCTCGTGATTCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCCCACAACAGTTAATTTCTATCCCCAGCCAGTGAAAACATAAAAATACGGCCAGGAAGCCTGGAAGAAGGGGAGAAAAAGAGGCTGGGTGTGATGGCTCATGCCTGTAATCCCAGCACTTTGGAGGGCTGAGGTGGGAGGATGGCTTGAGCCCAGGAGTTTTGAGATCAGCCTGGGCAACACAGCAAGACCTCGTCTCTATGAAAATAAAAAAAACTGGGCCGGGCGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5041:HG2_PB_HySA_32375:HG2_PB_pbsv_17830:HG4_PB_HySA_25860:HG2_PB_HySA_32374:HG3_PB_pbsv_17533:HG3_Ill_MetaSV_2380:HG3_Ill_GATKHCSBGrefine_11558:HG3_PB_HySA_26815:HG4_Ill_GATKHCSBGrefine_12030:HG2_Ill_GATKHCSBGrefine_11663:HG4_PB_pbsv_17747:HG4_Ill_MetaSV_2304:HG2_Ill_MetaSV_2236:HG2_PB_PB10Xdip_15172:HG2_PB_PB10Xdip_15171:HG2_PB_HySA_32373:HG4_PB_SVrefine2Falcon1Dovetail_11078:HG3_Ill_SVrefine2DISCOVARDovetail_12596:HG2_Ill_SVrefine2DISCOVARplusDovetail_5826:HG4_Ill_SVrefine2DISCOVARDovetail_12379:HG3_PB_SVrefine2PBcRDovetail_8688:HG4_PB_SVrefine2PBcRDovetail_8925:HG3_PB_SVrefine2Falcon1Dovetail_11080:HG2_PB_SVrefine2Falcon1plusDovetail_5493:HG2_PB_SVrefine2Falcon2Bionano_8736:HG2_PB_SVrefine2PB10Xhap12_12981;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11663:HG4_Ill_GATKHCSBGrefine_12030;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0710602;ClusterMaxSizeDiff=0.069914;ClusterMaxEditDist=0.201886;PBcalls=18;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=843;DistBack=-41;DistForward=13157;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=19:3742659-3742710;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9953;PctRecOverlap=0.9917;SizeDiff=-4;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=99;MatchId=2515.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:2:20:0:21:./.:2:8:2:8:0/1:4:27:./.:13:170:.:.:.
chr19	3909137	HG2_Ill_GATKHCSBGrefine_11668	T	TGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTAAGCCAAGATCGCTCCACTGCACTCCAGCCTGGGTGACAAGAACGAAACTCCATCTCAAAAAAAAAAAACAAGACTAGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACACCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTTGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5044:HG3_PB_pbsv_17536:HG2_PB_pbsv_17833:HG3_Ill_GATKHCSBGrefine_11563:HG4_PB_pbsv_17751:HG2_Ill_MetaSV_2237:HG2_Ill_GATKHCSBGrefine_11668:HG4_Ill_GATKHCSBGrefine_12033:HG2_PB_HySA_32377:HG2_PB_SVrefine2Falcon2Bionano_8739;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11668:HG2_Ill_MetaSV_2237:HG3_Ill_GATKHCSBGrefine_11563;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0966667;ClusterMaxSizeDiff=0.0866667;ClusterMaxEditDist=0.232258;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=301;DistBack=-114;DistForward=1874;DistMin=-114;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=213;REFWIDENED=19:3909035-3909247;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:11:23:./.:9:6:0:14:1|0:1:6:24:0:0/1:13:6:0/1:4:31:.:.:.
chr19	3989885	HG2_PB_PB10Xdip_15271	C	TTTGGGAGGCCAAGGTGGGCGGGGCCCGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAACACAAAAATTAGCTGGGCATGGTGGTACATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGACACGAAAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGACTGTGTCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCCATTTCAAAAAAAAAAAAAGAAAAGAAACTAAAAAAAAAAAAAAAAAAAAAAAAAAGGAATAGGAGCTCCAAGCAAAAGCTGGTACTTCTGACCACATAGCTATGCAAAGCCTTTATGATGAATACGGATTTATGCAGCCCCAGATTACTGAGGCTTAAACGGAGGGTCTCGGTCTGTCCAGACTCCCCCTTCTGCTGAGGGCTCCCAATGCAACCTTAGGGACGTGCATTAGAGCCTTCAGCCACCTGTTTTGCATTTCTTAGTTTTTTTGGCTGCCCTGGGGGCCTCCGGGGTAGGGGACTTTCCACTGGGCCACACCCACCTTGCCTGCAAACACAAGCATCAGTTTTTCCCCTGGTTTTCAACTTCTCCCAAAACCCAGTTCCTAACATTCCTCAGACCCTGGCACTCATGTGTTCAGCAAACATGGGACCCAGCTTTAAAACACTCAGAGAGAAATCCCTGCCCTCCGGAGATGGCGGGCTGGAGAGGAAATAGCCAATCAAATATCTGCACAAATGGAAGCTCTCAAATTGCACTAGGAGGGCAAGGGAGACCGAGTAAAGAGAGGGCATAATAGAGGAGGAAAGGCCGGGCGTGGTGATTCACGCCTGTAATCCCAGCACTTTGGGAGGCGGAGGCAGGTGGATATCCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCTCGTTTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCGCGCAGCTGTAGTCCCAGTTAGTCTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCTGAGATTGAGCTACGGCACTCCAGCCTGAGTGACAGAGTGAGACTTTGTCTCATAAAAATGAAAAAACAAAAACAAAAACAGGAGAGGACTGAGATCTATCGTGGCGAATCAGGGAGGGCATCATGGAGGAGGAGATTTTATTTTATTTTTTTTCTTGAGACGGAATCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAAGTTTTTGTATTTTTAATAGAGATGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGATCTCGTGATCCACCCACCTCGGCTTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCCCGCCCGGCCAAATAATAATAATATTAAAATAACGCAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGACACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAACTTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAGCCCGGGAGGCGGAGCTTGCAGTAAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAATAAAATAAAATAAAAATAAAAAATAAAGCGTAACCTATATACAGAAAGAACATGAATCGAATGTATAAAGTCTCGTGATTTTCACAAACTGAAAACACTCCAGTACGCAGCACCAAGATCTAACAACACACAATGTGACCAGGCCCCAGAAACACCCTCTGCCCTGCCAAGGATAACCACCCTATCTCCTGACACAGATTTTTTTGTGTGGCCTATTTTTGAGCTTCTCACACCTTGATGGTGCAGCACAGCCTCTTCTGGATCCAGCCTCTTCTTGTACTCAATGTTACCTAGAAGGATTTGTCCACTTTGTGGGTGGCTGACATTTGTGCATCCTCACTGCTGTGTTCTCTTTTTTTGAGACGGAGTCTCACTCTGGGTCCCAGGTTGGAGTGCAATGGTACAATCTCAGCTCACTGCAACCTCCGCCTCCTGAGCTCAGGCAAGTCTCCTGCCTCAGCCTCCCAAGTAGCTGGAACTAAAGGCACATGCCACCATGCCCGACTAATTTCTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGCCCAGGCTGGTCTTGAACTCCTGGCCTCCAGTGATCTGTCTGCCTCTGCCTCCCAAAGTGCTGGGAATACAGGCGTGAGGCACCGCGCCAGGCCGCCCCAGGGGATTTTTTTTCCCCAGAAGATGTTGCCCAGGCTGGTCTGGAACTATAGGCTCAACTGGTCCCCCTACCACAGACTCCTGAGCAGCTGGTGTTACAGGCAGGAACCCATGCACCTGACTAACCTCCCGTGTGGATTCTGCTCCAAGGGGACACTTAGCAATGTCTGGGGATATGCATGGTTCTTACGACTTGGGGTGCTCCTGGCATAGAGTGGGTGGAGGCCAGGGATGCTGCTTAGCGCCCTAAAGTGCCCAGGACTGCCCCACCCTGGAGAAGGATCTGGCCCCAAATGTTGATGATGTTGAGGTTGCAATTGAAATCCTGCCTCAATTATTTGGAAAAAACATTGAGATGCGAGAATAAACTCCCAGTGGGGTGAACAGCATATATCAGGGAGACCCCAGCTCCCGGGATTCTCCTCCTCTCTCCCTCCCCACGCAGGGTGTGAATTTCAATGTGCGCAGCCTCCTGGGACCTCAGCAGGGCAGAGAATCGAGACACACAGTCTCTTGGAGGTCCGTGGAATCCCCTAACCCAGGGGGTCTCAGCCAAGGTCGATCCTGCCTCCCCAGGGGACACTGGCAATGTCTGGGGACATTTGTGCTTGCCCTGGCAGAATGGGTGCTGTTCAGCACCCTGCTCCAGATGGCCCCACCCAAGAGAATTATCTAGCCCAGTTGTCAACAGTGCTGTGCTTTAGTAGCGCTGAACATAATTGTTTAAAATTATGAAATGCAGAAACTATTTCAGAGTTGCTATGCAGGTTGTATTCATTCATTCCACACATACTTATAGAGCAGTTTGTTTCTGCCAGGCATTAACTGAGGGACTGGGGACACAGACCTGGTGGGGCTGACATTCCAGTGAAGGTGACGGCAGGGAGGTGATGGGGCAGGTTGTGCACGGCATTGTGGGCCTCAGGGAAGACTGGCGCTTTTATCCAGAGGAAGGTGGGAGCCATAGAGGGCGGTGGGCAGAGAAGGGACAGGGTTTGACTCAGGTGCTCACACACGCCCTCTGCTGGCTGCTTTGGGGAGAACAGACTGTAGGTGGGAAGGGCAGGAGGCTGAAATCAGCTGAAAAAAAGCGGCAGGTTCCCGCAGCTCAGGGTACCTTAGGGCACTGGAAACCCACTGTGTGAGCAGCTTGCACCTGGGCCCTTTGCACTGCCCCATGGGACTTGGAGGACTTGGGGAACAGATGCCAACATGATGTTCATTTGGCCTGCTGTGGTGTGAGTTTGTTTGTTTAGACAGAGTCTCGCTCTGTCGCCAGGCTGGAGGGCAGTGGCACAATCTCAGCTCACTGCAACTTCAACCTCCTGGGTTCAAGCGATTCTCCTGACTCAGCCTCCCGAGTAGCTGGGATTGGGGCCGGCTAATTCTGTATTTTTAGGAGAGATGGGGTTTCTCCGTGTTGGTCAGGCTGGTCTCGAACTCCCGAACTCAGGTAATCTCCCCGCCTCAGCCTCCCAAAGTGCTGGGCTTAGAGGCGTGAGTCACCGCACCCGTCGGAGTCTATCTTTTCAAATCTCTTGGGTATATGCCCAGGAGTGGGATTGCTGCCTTGTTAATGTTTCTCAAACAGCCGGGAGCGGTGGCTCACGCCTGTAATCTCAGCAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5496:HG3_PB_pbsv_17539:HG2_PB_PB10Xdip_15272:HG2_PB_PB10Xdip_15271:HG2_PB_HySA_32380:HG3_PB_HySA_26822:HG3_PB_assemblyticsfalcon_12189:HG4_PB_SVrefine2PBcRDovetail_8927:HG4_PB_SVrefine2Falcon1Dovetail_11081:HG2_PB_SVrefine2Falcon2Bionano_8741:HG2_Ill_SVrefine2DISCOVARplusDovetail_5831:HG3_Ill_SVrefine2DISCOVARDovetail_12600:HG3_PB_SVrefine2PBcRDovetail_8692:HG2_PB_SVrefine2PBcRplusDovetail_5046:HG2_PB_SVrefine2PB10Xhap12_12985;NumClusterSVs=15;ExactMatchIDs=HG2_PB_PB10Xdip_15271:HG2_PB_PB10Xdip_15272;NumExactMatchSVs=2;ClusterMaxShiftDist=0.167823;ClusterMaxSizeDiff=0.167823;ClusterMaxEditDist=0.249085;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=4061;DistBack=-1;DistForward=8122;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=298;REFWIDENED=19:3989850-3990147;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9998;PctRecOverlap=0.9995;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:0:10:1:9:./.:1:3:1:2:1/1:1:19:1/1:1:571:.:3135:.
chr19	4561781	HG3_Ill_SVrefine2DISCOVARDovetail_12605	A	ACCCGGCTAATTTTTGTATTTTTAGTAGGGATAAGGTTTCACCATATTGGCCAGGCTGGTTTTGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5499:HG3_PB_HySA_26834:HG2_PB_pbsv_17844:HG3_PB_assemblyticsfalcon_12201:HG3_PB_HySA_26833:HG3_PB_SVrefine2PBcRDovetail_8695:HG3_Ill_SVrefine2DISCOVARDovetail_12605;NumClusterSVs=7;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_12605:HG3_PB_SVrefine2PBcRDovetail_8695;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0520446;ClusterMaxSizeDiff=0.0520446;ClusterMaxEditDist=0.150376;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=135;DistBack=-1307;DistForward=0;DistMin=-1307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=266;REFWIDENED=19:4561782-4562047;PctSeqSimilarity=0.9934;PctSizeSimilarity=1;PctRecOverlap=0.3333;SizeDiff=0;StartDistance=-90;EndDistance=-90;GTMatch=0;TruScore=77;MatchId=2518.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:16:0|1:18:1:3:12:./.:1:0:2:0:0/1:16:2:./.:.:.:.:.:.
chr19	4702853	HG2_PB_PB10Xdip_15895	G	GGGGAGGGAGAGGGAGGGAGAGGGAGGGAGAGGAGGGAGAGGGAGGGAGAGGGAGGGAGAGGGAGGGAGAGGGAGGGAAGGAAAGGGAAGGAGAGAGGGAGGGAGAGGGAGGGAGAGGGAGGGAGAGGGAGGGAGAGGGAGGGAGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8934:HG2_PB_SVrefine2Falcon1plusDovetail_5502:HG3_PB_HySA_26836:HG3_PB_pbsv_17552:HG2_PB_PB10Xdip_15896:HG2_PB_PB10Xdip_15895:HG4_PB_SVrefine2Falcon1Dovetail_11088:HG4_PB_pbsv_17767:HG2_PB_pbsv_17848:HG2_PB_SVrefine2Falcon2Bionano_8746:HG2_PB_SVrefine2PB10Xhap12_12992:HG3_PB_SVrefine2PBcRDovetail_8697:HG2_PB_SVrefine2PBcRplusDovetail_5051;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_15895:HG2_PB_PB10Xdip_15896;NumExactMatchSVs=2;ClusterMaxShiftDist=0.216216;ClusterMaxSizeDiff=0.216216;ClusterMaxEditDist=0.261438;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=145;DistBack=-31;DistForward=14;DistMin=-31;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=75;REFWIDENED=19:4702810-4702884;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9932;PctRecOverlap=0.9864;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2519.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:0:14:0:8:./.:1:3:1:3:./.:3:2:./.:.:.:.:.:.
chr19	4739147	HG3_PB_SVrefine2PBcRDovetail_8698	C	CTTTCTTTCTTTCTTTCTTTTTTGAGATGGAGTCCCACTCTGTCTCCAGGCTGGTGTGCAGTGGTGTGGTCTTGGCTCACTGTGACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGCAATTACAGGCACCTGCCACTGCCACCACACTTGGCTAATTTTTGTATTTTTAGTACAGATGACAGGGTTTCACAATGTGGGCCAGTCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCTGCCTCGGCCTCCCGAAGTGCTGGGATTACATGCATGAGCCACCGTGCCCAGCATGCCCAGATAATTTTTAAACTTTTAGTAGAGACTGGCCGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTAGGAGGCTGAAGCGGGCAGATCGCGAGGTCGGGAGATCGAGAACATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATAGAAAAAATTAGCCAGGCGTGCTGGCGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATGGCGCCACTGCACTCCAGCCTGGGCAACAAAGTGAGACTCCGTCTCAAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAGTTTTAGTAGAGTTTGGTGTCTCACTTTGTTGCCCAGGCTGATCTCTAACTCCTGGCCTCAAGCAATCCTCCTGCCTCACCTCTCAAAACATTGGGATTATGGGCATGAGCCACCTTGCCTGGCCCATTTAACATTTTTAAAACAAAATTTTAACTGTCATCCTTACCATTGACAATCACAAGAAAATAGCAGCCACTCATAATTCCACTCCCCACTGGTAACCTTTTGTTGAAAATTCTTTTAGATTAGAAAAAGAAAAGATAAGAAAAGTGTGTTGCATCATTGTATGTGGGATGTTTGAGTCCTGATTTGAATGAATGAACCAATTTTATAAAAATGTCTGTGGGCCCTGTCAGGCTATTCCATACTATTAGAGGATTACTGCAGAGGTGGTGATGATACTGGGATTACATATTTGTAGCAGAGTCCTTTTCTGGGCCAGGTGAGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACTTGAGGTCAGGAGTTCGAGATCAGCCTGGGCAACAAAGTGAGACACGAAACTCTACTAAAAGTTTATTTATTTATTTATTTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8935:HG2_PB_pbsv_17849:HG2_PB_PB10Xdip_15897:HG4_PB_pbsv_17768:HG4_PB_HySA_25869:HG3_PB_HySA_26837:HG4_PB_SVrefine2Falcon1Dovetail_11089:HG2_PB_SVrefine2PBcRplusDovetail_5052:HG2_PB_SVrefine2PB10Xhap12_12993:HG2_Ill_SVrefine2DISCOVARplusDovetail_5840:HG4_Ill_SVrefine2DISCOVARDovetail_12388:HG3_PB_SVrefine2PBcRDovetail_8698:HG3_Ill_SVrefine2DISCOVARDovetail_12608:HG2_10X_SVrefine210Xhap12_12373;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12373:HG3_Ill_SVrefine2DISCOVARDovetail_12608:HG3_PB_SVrefine2PBcRDovetail_8698:HG4_Ill_SVrefine2DISCOVARDovetail_12388;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0486656;ClusterMaxSizeDiff=0.0470958;ClusterMaxEditDist=0.219559;PBcalls=10;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1252;DistBack=1782;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=286;REFWIDENED=19:4739148-4739433;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9912;PctRecOverlap=0.9194;SizeDiff=11;StartDistance=-95;EndDistance=-95;GTMatch=0;TruScore=96;MatchId=2520.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:0:19:1:10:./.:0:5:0:9:1/1:0:42:./.:16:165:.:1315:.
chr19	4965584	HG4_Ill_GATKHCSBGrefine_12044	G	GTGAGCCACTGCGCCTGGCCTGTATTGTTTTTTATTTTTAAGAGACAGTCTCACTTTGTCACCCAGGCTGGAGTACAGTGGCATGATCATAGGTCACTGCAGCCTCGACCTTTTGGGCTCAAGGGATCCTCCTGCCTCTGCCTCCCAAAGTGCTGGGATTACAGTCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12378:HG3_PB_HySA_26841:HG2_PB_HySA_32403:HG2_PB_PB10Xdip_15923:HG2_PB_PB10Xdip_15922:HG2_PB_HySA_32402:HG2_PB_pbsv_17853:HG4_PB_SVrefine2PBcRDovetail_8938:HG3_PB_SVrefine2PBcRDovetail_8701:HG4_Ill_MetaSV_2310:HG4_Ill_GATKHCSBGrefine_12044:HG3_Ill_GATKHCSBGrefine_11570:HG2_Ill_manta_4755:HG2_Ill_MetaSV_2241:HG2_Ill_GATKHCSBGrefine_11674:HG2_Ill_250bpfermikitraw_23388:HG2_Ill_150bpfermikitraw_22031:HG4_PB_HySA_25874:HG3_PB_pbsv_17557:HG4_PB_SVrefine2Falcon1Dovetail_11093:HG4_PB_pbsv_17772:HG4_Ill_SVrefine2DISCOVARDovetail_12392:HG2_PB_SVrefine2PBcRplusDovetail_5055:HG2_PB_SVrefine2PB10Xhap12_12997:HG2_PB_SVrefine2Falcon2Bionano_8750:HG2_PB_SVrefine2Falcon1plusDovetail_5506:HG2_Ill_SVrefine2DISCOVARplusDovetail_5843;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22031:HG2_Ill_250bpfermikitraw_23388:HG2_Ill_GATKHCSBGrefine_11674:HG2_Ill_MetaSV_2241:HG2_Ill_manta_4755:HG3_Ill_GATKHCSBGrefine_11570:HG4_Ill_GATKHCSBGrefine_12044:HG4_Ill_MetaSV_2310:HG4_PB_SVrefine2PBcRDovetail_8938;NumExactMatchSVs=9;ClusterMaxShiftDist=0.255591;ClusterMaxSizeDiff=0.249201;ClusterMaxEditDist=0.319489;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=166;DistBack=-7;DistForward=5139;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=19:4965559-4965591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2521.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:1:22:1:27:1/1:1:17:1:12:1/1:0:23:./.:.:.:.:.:.
chr19	5131560	HG2_PB_SVrefine2PBcRplusDovetail_5057	G	GGGTGGAGCGGGGGAGGCAGGGAGGAGGGGGGCAGGTGGGGTGGGGCAGGGGAGGAGGGGGCAGGTGGGGCACAGGGGAGCTGGTGGCGGGGGAGGGGGCAGGGAGGAGGGGGGCAGGTGGGGTGGGGCAGGGGAGGAGGGGGCAGGTGGGGCACAGGGGAGCTGGTGGCGGGGGAGGGGGCAGGGAGGAGGGGGGCAGGTGGGGTGGGGCAGGGGAGGAGGGGGCAGGTGGGGCACAGGGGAGCTGGTGGCGGGGGAGGGGGCAGGGAGGAGGGGGGCAGGTGGGGTGGGGCAGGGGAGGAGGGGGCAGGTGGGGCACAGGGGAGCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8752:HG3_PB_assemblyticsfalcon_12212:HG3_PB_pbsv_17561:HG2_PB_PB10Xdip_15983:HG2_PB_HySA_32406:HG2_PB_SVrefine2Falcon1plusDovetail_5508:HG2_PB_pbsv_17855:HG2_PB_SVrefine2PBcRplusDovetail_5057:HG2_PB_SVrefine2PB10Xhap12_12999;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8752:HG2_PB_SVrefine2PBcRplusDovetail_5057:HG2_PB_SVrefine2PB10Xhap12_12999;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0341085;ClusterMaxSizeDiff=0.0341085;ClusterMaxEditDist=0.204651;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=327;DistBack=11;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=111;REFWIDENED=19:5131561-5131671;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9939;PctRecOverlap=0.9544;SizeDiff=-2;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=98;MatchId=2522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:44:1/1:3:11:0:16:./.:0:1:0:0:./.:0:0:./.:1:6:.:.:.
chr19	5761474	HG4_Ill_SVrefine2DISCOVARDovetail_12398	G	GGCTGGATGGTGTATTAGTCTGTTTTCACAGTTTTCAGAACTATCTGAGATTGGGTAATTTATAAAGAAAAGAGGTTTAATTGACTCACAGTTCCTCAGGCTTAACAGGAAGCACGACTTGGGGGTCTTAGGAAACTTACAATCATGGCGGAAGGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16118:HG3_PB_assemblyticsfalcon_12223:HG2_PB_assemblyticsPBcR_11774:HG3_PB_HySA_26853:HG4_PB_HySA_25886:HG3_PB_SVrefine2PBcRDovetail_8705:HG4_PB_pbsv_17777:HG2_PB_HySA_32413:HG3_PB_pbsv_17564:HG4_PB_SVrefine2PBcRDovetail_8942:HG2_PB_pbsv_17858:HG4_Ill_SVrefine2DISCOVARDovetail_12398:HG3_Ill_MetaSV_2388:HG2_PB_SVrefine2PBcRplusDovetail_5059:HG2_PB_SVrefine2PB10Xhap12_13001:HG4_PB_SVrefine2Falcon1Dovetail_11096:HG2_PB_PB10Xdip_16119;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13001:HG2_PB_SVrefine2PBcRplusDovetail_5059:HG3_Ill_MetaSV_2388:HG4_Ill_SVrefine2DISCOVARDovetail_12398:HG4_PB_SVrefine2PBcRDovetail_8942;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0943396;ClusterMaxSizeDiff=0.0628931;ClusterMaxEditDist=0.270769;PBcalls=15;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=155;DistBack=10236;DistForward=154;DistMin=154;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=156;REFWIDENED=19:5761475-5761630;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:41:1/1:1:14:2:16:1/1:0:9:1:14:1/1:0:18:./.:.:.:.:.:.
chr19	5787194	HG2_PB_SVrefine2Falcon2Bionano_8754	T	TGGTGGGAGGTGGTGGGAGATGGTGGGAGGTCGTGGGAGATGGTGGGAGGTCGTGGGAGATGGTGGGAGGTAGTGGGAGACAGTGGCAGACAGTGGGAGGTGGTGGGAGATGGTGGCAGACGGTGGGAGGTGGTGGGAGACAGTGGGAAGTGGTGGGAGGTGGTGGGAGACGGTGGGAGGTGGTAGGAGACGGTGGGAGGTGGTGGGAGACACTCGGAGACGGTGGGATGTGGTGGGAGGTAGTGGGAGACATTGGCAGACGGTGGGAGGTGGTGGGAGATGGTGAGAGGTGGTGGGAGACGGCGGGAGGTGGTGGGAGATGGCGGGAGGTGGTGGGAGACGGTGGGAGGTGGTGGGAGGTGGTGGGAGACGGAGAAGGTGGGATGTGGTGGGAGGTAGTGGGAGACACTGGCAGATGGTGGGAGGTCGTGGGAGATGGTGGGAGGTGGTGGGAGACGGTGGGAGATGGTGGGAGGTGGTGGGAGACGGCGGGAGGTGGTGGGAGATGGCGGGAGGTGGTGGGAAGTGGTGGGAGACGGAGATGGTGGGAGACGGTGGGAGACGGCGGGAGGTGGAGGGAGGCGGCGGGAGATGGCGGGAGGTGGCAGGAGACGTGGGAGGTGGCAGGAGAC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8943:HG2_PB_pbsv_17859:HG4_PB_HySA_25889:HG2_PB_PB10Xdip_16121:HG2_PB_PB10Xdip_16120:HG3_PB_HySA_26855:HG2_PB_HySA_32415:HG2_Ill_breakscan11_4821:HG4_PB_HySA_25888:HG3_PB_pbsv_17565:HG3_PB_SVrefine2PBcRDovetail_8706:HG4_PB_pbsv_17778:HG2_PB_SVrefine2PBcRplusDovetail_5060:HG3_PB_assemblyticsfalcon_12225:HG2_PB_assemblyticsfalcon_12153:HG2_PB_assemblyticsPBcR_11776:HG2_PB_SVrefine2PB10Xhap12_13002:HG2_PB_SVrefine2Falcon2Bionano_8754:HG2_PB_SVrefine2Falcon1plusDovetail_5510:HG4_PB_SVrefine2Falcon1Dovetail_11097;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5510:HG2_PB_SVrefine2Falcon2Bionano_8754:HG2_PB_SVrefine2PB10Xhap12_13002:HG2_PB_SVrefine2PBcRplusDovetail_5060:HG3_PB_SVrefine2PBcRDovetail_8706;NumExactMatchSVs=5;ClusterMaxShiftDist=0.267091;ClusterMaxSizeDiff=0.267091;ClusterMaxEditDist=0.306836;PBcalls=19;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=631;DistBack=7991;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=59;REFWIDENED=19:5787195-5787253;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=0.9667;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=98;MatchId=2524.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:0:14:1:13:1/1:1:58:1:66:./.:0:8:1/1:3:81:.:.:.
chr19	5996263	HG2_Ill_250bpfermikitraw_23402	A	ACACAAACACCCGCCCACACACGCCCACGCAGCCCCGTTCACGACGGCCACAGAGAGGGAGCGCGTG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16130:HG4_Ill_svaba_21876:HG3_Ill_svaba_22140:HG2_Ill_svaba_21913:HG2_PB_HySA_32422:HG4_PB_SVrefine2PBcRDovetail_8945:HG4_PB_pbsv_17780:HG4_PB_SVrefine2Falcon1Dovetail_11098:HG4_Ill_SVrefine2DISCOVARDovetail_12399:HG4_Ill_Krunchall_24082:HG4_Ill_GATKHC_28065:HG4_Ill_GATKHCSBGrefine_12045:HG4_Ill_150bpfermikitraw_22164:HG3_PB_assemblyticsfalcon_12229:HG3_Ill_manta_3899:HG3_Ill_SVrefine2DISCOVARDovetail_12624:HG3_Ill_Krunchall_23317:HG3_Ill_GATKHC_27982:HG3_Ill_GATKHCSBGrefine_11573:HG3_Ill_250bpfermikitraw_22743:HG2_PB_SVrefine2PBcRplusDovetail_5061:HG2_PB_SVrefine2PB10Xhap12_13004:HG2_PB_SVrefine2Falcon1plusDovetail_5512:HG2_Ill_Krunchall_23715:HG2_Ill_GATKHC_28074:HG2_Ill_GATKHCSBGrefine_11676:HG2_Ill_250bpfermikitraw_23402:HG3_PB_HySA_26860:HG2_PB_PB10Xdip_16131;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23402:HG2_Ill_GATKHCSBGrefine_11676:HG2_Ill_GATKHC_28074:HG2_Ill_Krunchall_23715:HG2_PB_SVrefine2Falcon1plusDovetail_5512:HG2_PB_SVrefine2PB10Xhap12_13004:HG2_PB_SVrefine2PBcRplusDovetail_5061:HG3_Ill_250bpfermikitraw_22743:HG3_Ill_GATKHCSBGrefine_11573:HG3_Ill_GATKHC_27982:HG3_Ill_Krunchall_23317:HG3_Ill_SVrefine2DISCOVARDovetail_12624:HG3_Ill_manta_3899:HG3_PB_assemblyticsfalcon_12229:HG4_Ill_150bpfermikitraw_22164:HG4_Ill_GATKHCSBGrefine_12045:HG4_Ill_GATKHC_28065:HG4_Ill_Krunchall_24082:HG4_Ill_SVrefine2DISCOVARDovetail_12399:HG4_PB_SVrefine2Falcon1Dovetail_11098:HG4_PB_SVrefine2PBcRDovetail_8945;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0882353;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.231884;PBcalls=11;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=-68;DistForward=62;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=70;REFWIDENED=19:5996264-5996333;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:0|1:22:3:1:24:./.:13:0:2:19:0/1:22:20:./.:.:.:.:.:.
chr19	6318517	HG4_PB_SVrefine2PBcRDovetail_8948	A	AGTGGCTCATGCCTGTAATTCCAGCACTTTGGAAAGCTCAGGCAGGCGGATCATGAGGTCACGAGATCGAGACCATCCTGGCTAACACAGTGAAACACCGTCTCTACTAAAAATACAAAAAAAAAAAAAAAATAGCTGGGTGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATGGCGTGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCATCTCAAAATAAATAAATAAATAAATAAAATGTTCATGCCTCCTGTAAATAAAATCTAAACTCTTTTTTTTTTTTTTTTTTGAGATGGAGTTCTCTCTGTTCCCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCGCCGCCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCAGCCGCCTCAGCCTCCCAAGTGCTGGGATTACAGGTGAGAGCCACCGCGCCCGGCCAAAATCTAAACTCTTAAACTTGCCTTATAAAATTATTCCTGGCCGGGCGTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13008:HG4_PB_HySA_25897:HG3_PB_pbsv_17573:HG2_PB_HySA_32427:HG4_PB_pbsv_17784:HG3_PB_HySA_26868:HG3_Ill_GATKHCSBGrefine_11576:HG2_Ill_MetaSV_2245:HG3_Ill_MetaSV_2391:HG4_Ill_GATKHCSBGrefine_12048:HG2_Ill_GATKHCSBGrefine_11679:HG2_PB_PB10Xdip_16139:HG2_PB_PB10Xdip_16138:HG2_PB_pbsv_17866:HG4_PB_SVrefine2Falcon1Dovetail_11102:HG3_PB_SVrefine2PBcRDovetail_8711:HG2_PB_SVrefine2Falcon2Bionano_8760:HG2_PB_SVrefine2Falcon1plusDovetail_5516:HG2_10X_SVrefine210Xhap12_12391:HG4_PB_SVrefine2PBcRDovetail_8948:HG2_PB_SVrefine2PBcRplusDovetail_5065;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13008:HG4_PB_SVrefine2PBcRDovetail_8948:HG2_PB_SVrefine2PBcRplusDovetail_5065;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0558339;ClusterMaxSizeDiff=0.0558339;ClusterMaxEditDist=0.229531;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=685;DistBack=30139;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9563;REFWIDENED=19:6328231-6318821;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9912;PctRecOverlap=0.6628;SizeDiff=6;StartDistance=-228;EndDistance=-228;GTMatch=0;TruScore=87;MatchId=2526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:51:1/1:0:18:2:29:./.:0:4:0:5:./.:0:6:1/1:5:80:.:.:.
chr19	6435436	HG2_PB_HySA_32429	T	TAAAAAATTATGACCATCCCGGCTTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTCGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_32429:HG2_PB_pbsv_17873:HG2_PB_assemblyticsPBcR_11789:HG3_PB_assemblyticsfalcon_12236:HG4_PB_HySA_25902:HG4_PB_SVrefine2PBcRDovetail_8950:HG2_PB_SVrefine2PBcRplusDovetail_5067;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_32429;NumExactMatchSVs=1;ClusterMaxShiftDist=0.129032;ClusterMaxSizeDiff=0.129032;ClusterMaxEditDist=0.15894;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=243;DistBack=5777;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=19:6435437-6435445;PctSeqSimilarity=0.9877;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:23:16:0|1:21:0:1:11:./.:13:0:1:15:0/0:23:0:./.:.:.:.:.:.
chr19	6533708	HG2_PB_assemblyticsPBcR_11790	C	CCCCTTCCCTCTCCCTCCAGAGACCCCTTCCCCTCTCCCTCCAGAGACCCTT	10	PASS	ClusterIDs=HG2_PB_pbsv_17874:HG2_PB_PB10Xdip_16143:HG2_PB_assemblyticsPBcR_11790:HG2_PB_PB10Xdip_16142;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsPBcR_11790;NumExactMatchSVs=1;ClusterMaxShiftDist=0.159292;ClusterMaxSizeDiff=0.159292;ClusterMaxEditDist=0.265487;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=51;DistBack=29;DistForward=108;DistMin=29;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=19:6533707-6533712;PctSeqSimilarity=0.8205;PctSizeSimilarity=0.6456;PctRecOverlap=0.6456;SizeDiff=-28;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=70;MatchId=2529.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:17:./.:8:12:6:3:./.:5:4:5:1:./.:0:0:./.:.:.:.:.:.
chr19	7104585	HG4_PB_pbsv_17800	T	TACTGCTCCAACTAAGCATCCACTACCCTCGCACTACAGCATCCACTACCTCCACTACAGCATCCACATACTCATACTACAGCCATCCACTACCTCCAACAGCATCCACACCTCCACACAATGCAGTCCAC	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_12410:HG4_PB_pbsv_17800:HG2_PB_pbsv_17886;NumClusterSVs=3;ExactMatchIDs=HG4_PB_pbsv_17800;NumExactMatchSVs=1;ClusterMaxShiftDist=0.045977;ClusterMaxSizeDiff=0.0228137;ClusterMaxEditDist=0.227273;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=130;DistBack=2;DistForward=36;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=112;REFWIDENED=19:7104533-7104644;PctSeqSimilarity=0.9265;PctSizeSimilarity=0.9692;PctRecOverlap=0.9313;SizeDiff=4;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=94;MatchId=2530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:18:0|1:20:4:1:11:0/0:26:0:30:1:0/0:49:1:./.:.:.:.:.:.
chr19	7130784	HG2_10X_SVrefine210Xhap12_12403	T	TCCTCTCTCTTCTCTTCTTTCTTTTTCTTTCTTTTATCTCTCTTTTTCTCTCTTTCTTTCCTTTTCTTTCTTTTTCTTTTTCTTCTCTCTCTCTTTCACTCTTTCTTTCTTTTTTATTTTTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCATGATGTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACGCATCACCACGCCCAGCTAATTTTTTTATTTTTAGTAGAAACGGGGTTCCACCATATTAGCCAGGCTGGTCTCAAACTCCTGACCTCATGATCTACCCACCATGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCGTCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11090:HG3_PB_pbsv_17590:HG2_PB_PB10Xdip_16197:HG3_PB_HySA_26895:HG3_Ill_GATKHCSBGrefine_11583:HG2_Ill_MetaSV_2248:HG3_Ill_MetaSV_2393:HG2_PB_pbsv_17887:HG2_PB_SVrefine2PB10Xhap12_13019:HG2_PB_SVrefine2Falcon2Bionano_8765:HG3_PB_SVrefine2PBcRDovetail_8716:HG3_Ill_SVrefine2DISCOVARDovetail_12636:HG2_Ill_SVrefine2DISCOVARplusDovetail_5861:HG2_10X_SVrefine210Xhap12_12403:HG4_PB_SVrefine2Falcon1Dovetail_11110;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12403:HG2_Ill_SVrefine2DISCOVARplusDovetail_5861:HG3_Ill_SVrefine2DISCOVARDovetail_12636:HG3_PB_SVrefine2PBcRDovetail_8716;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0885609;ClusterMaxSizeDiff=0.0861009;ClusterMaxEditDist=0.240695;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=401;DistBack=5797;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=403;REFWIDENED=19:7130785-7131187;PctSeqSimilarity=0.9593;PctSizeSimilarity=0.9926;PctRecOverlap=0.4148;SizeDiff=-3;StartDistance=-235;EndDistance=-235;GTMatch=0;TruScore=78;MatchId=2531.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:29:0|1:17:3:2:21:1|0:0:12:8:0:0/1:26:24:0/1:7:16:.:.:.
chr19	7756778	HG2_PB_SVrefine2PBcRplusDovetail_5076	G	GCACCTCAACCACCAGCACTATCACCACAAATACATTCATGTCCAACAACACATCAACTACCAACACCATTGTCACACATTCACATTCACGTCCATCAACACATCAACCACCAACACCGTCGCCACGAACACATTCACGTCCATCAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5528:HG4_PB_HySA_25934:HG2_PB_pbsv_17894:HG3_PB_HySA_26900:HG4_PB_pbsv_17805:HG2_PB_HySA_32469:HG2_PB_PB10Xdip_16214:HG2_PB_PB10Xdip_16213:HG4_PB_SVrefine2PBcRDovetail_8958:HG4_PB_SVrefine2Falcon1Dovetail_11113:HG3_PB_SVrefine2PBcRDovetail_8718:HG3_PB_SVrefine2Falcon1Dovetail_11094:HG3_Ill_SVrefine2DISCOVARDovetail_12638:HG2_PB_SVrefine2PBcRplusDovetail_5076:HG2_PB_SVrefine2PB10Xhap12_13022:HG2_PB_SVrefine2Falcon2Bionano_8768;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5528:HG4_PB_SVrefine2PBcRDovetail_8958:HG4_PB_SVrefine2Falcon1Dovetail_11113:HG3_PB_SVrefine2PBcRDovetail_8718:HG3_PB_SVrefine2Falcon1Dovetail_11094:HG3_Ill_SVrefine2DISCOVARDovetail_12638:HG2_PB_SVrefine2PBcRplusDovetail_5076:HG2_PB_SVrefine2PB10Xhap12_13022:HG2_PB_SVrefine2Falcon2Bionano_8768;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0866667;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.245955;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=146;DistBack=2948;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=707;REFWIDENED=19:7756779-7757485;PctSeqSimilarity=0.9757;PctSizeSimilarity=0.9863;PctRecOverlap=0.449;SizeDiff=2;StartDistance=-80;EndDistance=-80;GTMatch=0;TruScore=80;MatchId=2534.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:11:44:1/1:5:14:2:8:./.:6:9:8:19:0/1:20:3:./.:.:.:.:.:.
chr19	7804011	HG2_Ill_GATKHCSBGrefine_11689	A	ACAAAAAAATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2249:HG4_PB_pbsv_17806:HG3_PB_pbsv_17595:HG2_PB_pbsv_17895:HG3_PB_SVrefine2Falcon1Dovetail_11095:HG2_PB_assemblyticsfalcon_12193:HG4_PB_assemblyticsfalcon_12059:HG2_Ill_breakscan11_4824:HG2_PB_HySA_32470:HG4_PB_HySA_25936:HG4_Ill_manta_4047:HG4_Ill_GATKHCSBGrefine_12060:HG3_PB_SVrefine2PBcRDovetail_8719:HG4_PB_SVrefine2Falcon1Dovetail_11114:HG3_PB_HySA_26901:HG2_PB_SVrefine2Falcon1plusDovetail_5529:HG2_10X_SVrefine210Xhap12_12413:HG3_Ill_GATKHCSBGrefine_11587:HG2_PB_SVrefine2Falcon2Bionano_8769:HG2_Ill_GATKHCSBGrefine_11689;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11689:HG2_PB_SVrefine2Falcon2Bionano_8769:HG3_Ill_GATKHCSBGrefine_11587;NumExactMatchSVs=3;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.195046;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=316;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=19:7804012-7804024;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:22:1|0:1:18:17:0:0|1:11:0:0:11:0/1:34:16:0/1:8:37:.:.:.
chr19	8236997	HG3_PB_pbsv_17601	T	TTTTTTTTTTTTTTTTTTTTTTGAGACTGGAGTCTCGCTCTGTCGCCCCAGGCTGGAGTGCAGTGGCGGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGTTCAACGCCCATCTCCTGCCTCAGCCTCCCCCAAGTAGCTGGACTAACAGGCACCCGCCCACTAATACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACAGTTTTAGCCCGGGATGGTCTCGATCTCCTGACGCTCAGTGATCCGCTCGCCTCGGCTCTCCAAAGTGGCTGGGATTACAGGCGTGAGCCACCGCGCCGCCTACC	20	PASS	ClusterIDs=HG4_PB_HySA_25947:HG3_Ill_MetaSV_2395:HG3_PB_pbsv_17601:HG4_PB_pbsv_17814:HG2_PB_pbsv_17902;NumClusterSVs=5;ExactMatchIDs=HG3_PB_pbsv_17601;NumExactMatchSVs=1;ClusterMaxShiftDist=0.17734;ClusterMaxSizeDiff=0.174056;ClusterMaxEditDist=0.266442;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=4;DistForward=277;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=282;REFWIDENED=19:8236993-8237274;PctSeqSimilarity=0.9591;PctSizeSimilarity=0.9653;PctRecOverlap=0.9685;SizeDiff=11;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=96;MatchId=2536.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:16:./.:19:3:4:11:0|1:11:0:0:7:0/1:29:8:0/1:6:17:.:.:.
chr19	8487839	HG2_PB_PB10Xdip_16221	A	AGCCTCCCAAAGTTTGGGATTACAGGCGTGAGCCACCGTGCCTGGCCCCTTTTTTTTGAGGCAGGCAGAGTCTCGCTGTGTCGCCCAGCTGGAGTGCAGTGGCACAGTCTCGGATCACTGCAACCTCTGCCTCCTGGGCTCAAGGGATTCTCCTGCCTCAGTCTCCTGTGTAGCTGGGATTACAGGAGTGAGCCACTGCACCTGGCTACTTTTTGTATTTTTAGTAGACATGGTGAGCCACTGCACCTGGCCCCCATTTCCTTCTAATCTGTATCTTTTGCATTATTTCCCTGCCAAAATTTCTTGAGTAAAGCCCATTTCCCTAGCGCAGCATCTGAGGTGGGCAGTGCACACAGCACAGCAGCCTAGGGTACTCTGCCCTGGAGTCAGACTTCCTGGGTCCCAGTCCCAGCTGCATGGACTCCTGACTGCAAGTTTGCAGAAATGAGTTCACTCCTCCTGGCCTCCGTTTTCTCATGTGTAAGATGGAAGCAAAAATAGCACCTGATGGCCAGGCACGGTGGCTCCCGCCTGTAATCCCAGCACTATGGGAGGCCGAGGCGGGTGGATCGCTTGAGCTCAGGAGTTTGAGACCAGCCTAGGCAACATAGGGAGACCCTGCCTCTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTAGCCAAGAGTGGTGGCACGCACCTGTAGTCTCAGCTACTCAGGAAGCTGAGGTGGGAGAATCGCTTGAGCCTGGGAGGTCAAGGCTGCAGTGAACTGTGATCACATCACTGCACTCCAGCCTGGGTGACAGGGTAGACTCTATCTCAAAAAAAAGAAAAAAAAAAAGCGCCTTCCTTATAGAATGAGAAAGACTAATCCAGATGTTGCTCTTAGAATAGTGCCTGGTACGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGAACTTTGGGAGGCCAAGGTGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGCGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGACAACAGAGCGAGATGCCGTCTCAAAAAAAAAGAAAAAAAAAAAAAAGAATAGTGCCTGGTACATAGTAAGTGCTCAACAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGAGTTCGAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5531:HG4_PB_HySA_25957:HG4_PB_pbsv_17816:HG4_PB_HySA_25956:HG3_PB_pbsv_17604:HG2_PB_pbsv_17905:HG2_PB_PB10Xdip_16222:HG2_PB_PB10Xdip_16221:HG3_PB_HySA_26916:HG2_PB_HySA_32486:HG4_PB_SVrefine2PBcRDovetail_8962:HG2_PB_SVrefine2PBcRplusDovetail_5082:HG2_PB_SVrefine2PB10Xhap12_13027:HG2_PB_SVrefine2Falcon2Bionano_8773:HG3_PB_SVrefine2PBcRDovetail_8724:HG3_PB_SVrefine2Falcon1Dovetail_11100:HG4_PB_SVrefine2Falcon1Dovetail_11118;NumClusterSVs=17;ExactMatchIDs=HG2_PB_PB10Xdip_16221:HG2_PB_PB10Xdip_16222;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0586684;ClusterMaxSizeDiff=0.044239;ClusterMaxEditDist=0.216216;PBcalls=17;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=1498;DistBack=-47;DistForward=46;DistMin=-47;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=82;REFWIDENED=19:8487805-8487886;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.996;PctRecOverlap=0.996;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2537.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:2:18:0:10:./.:1:5:0:3:1/1:0:21:./.:17:208:.:1521:.
chr19	8788116	HG2_Ill_GATKHC_28123	A	ATCCATCCATCCATCCATCCATCTATCCATCCACCCTTCCATCCATTCATCCACTTG	20	PASS	ClusterIDs=HG2_Ill_GATKHC_28123:HG4_PB_pbsv_17824:HG2_PB_assemblyticsfalcon_12213;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_GATKHC_28123:HG2_PB_assemblyticsfalcon_12213;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0720721;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.144144;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=15;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=22;REFWIDENED=19:8788115-8788139;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2538.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:0|1:22:0:4:26:./.:244:54:272:422:./.:1:0:./.:.:.:.:.:.
chr19	9007241	HG2_PB_SVrefine2Falcon1plusDovetail_5537	C	CACCACCACCATCATCATTATCCTCATCATCCCCATCACCACCAGCGCTATCATCACCATCTTCATTATCATCAGTGTCAACATCATCATCATTTTTGTCAATCACCACCACCATAATTATTACTGTCTTCACATAATTATTATCATCATAACCACTACCCCCACCATTATCATCATCCTCATCACTGTCATCATAATTAGCAACATCACCACCATCATCTATATCATGATCATTATCAACATCATCATCAGCATCACCACCATCATCATCACCATCACTTACATCATCATCATCACAGGAATATAAGCTATCTTAAGCAGAGATTGCTATCTATTTCTATGTTCCCTGCTGTATCTCCAGGGCCTGGCACAGAGTAGGTGCTCAATAAAGTTTACAGGTTAACTCCTCATCACCATATTTACTATGACTTTTATCTTTATTTAAGTGCATAATGGCAGAAATGTTTATATTCATCAGGCACACTCTAATGGAAGTGCCATTGGCTGATACTTACCTGTAGTTTCAGGGAGGGAAGGGGGATCCCAGAGGTTCCCAGGTTCACTATGGAGGTCCCAGGAGCTAAGGAGAAGCCCTCATCAGTGAAAGCAGCAAGCATTCTCATGGCAGAAATGCCAGCAGGTAGGACTAGTATGAGGCTTGCTGCAGGTGGGTCTTGAACTGTGTTTCTCTTTTGGGCATAGGGGAGAGGGAATAACTTGTGCTCTCCCAGCACCTTCCTCTCATAAAGGGGACATAAGTGTGTATGAGGAGGACTAAGCTCCTGCCCTGCTTGGGGTAGAATTGGGGGTACTGGAACATCAGTTGAATACTCACTGCTGGTGGTTGGTATGGGGCTCCAATGAGTGAAACCTGCAGAGAGAGGGAAGGAGGATAGTGGGTAAGAGTTAAGGAGAGGTGGGGGGACCAAATAGGAATCAGAGCTACCCTGGTGGAATAGAAGGGGTTTCATGGAACAGGAGCCATTAGAGGTTCTCTATCAGCACGTTCACTTCAGGGACCAGGGTCTGGAGAATGAACTCAGTCCAAGATGCAGAAAAAAATAATGAAGTTCTAACATCAATCATCACATACAGACAACATGGCAGAGGCTTCAACGTCCAGACAGGAAGTGCGACTTCAAGCCAGAGAGGAGGGGTTGTCCAGCAAGGAGGAAGAGACTCCAACCACATCAAAGCTGCTCACCATCGACATAGAGACTGTCCCTGTCCAGGGTGTAGGGCCCAGCTCAGTGATGCCGTGGGTCAGCTGGCTCAGCTCCCAGTACAGCTGCTCTCTGTTCAGTCCAGGGCTTTGAGGGTCAGGGTGGTGGGTACAGATGGCATCCACTCTGGTGGCTGCCTTGTCCTTCTCTGGCCTGAGGAGGTTAGGTGGTGGGGGGGGTGACAATGAAAGGACTGCCCAGGAAGGGGTCCTGAGATTCCTGAGGGAAGGACAGGGAGGGGACAGAGGAAATGAGAAGCCTGGGAGAGAGGTGAGAAGCCACAGTTAATTTCTCTAAATGCACCAACTCCCAGTCCAAGCAGAGTCATGGACACAAGAGTATTTATGAAATTGCAAGGTGAAACCTGCAGTTTGATAGCGCGAAGACAGGAGAGCTCAGACTTGAGATAAGTGAAGAGCTAGAATCAGAGATAAAAGCAAGTGGAAAAGCCACCTTTCTCTTAAGGGAGACCTTGGGAACAGAATTTTAAAACTTAAGGGAAGGGATATGGGGGAATGGAAGGCATTAAGAAGGATGAATGGAGTAAGAAGCCAAACTTTATGATGGGCTCAGGAGAATCTGTCACTTGAGTGGGGAAGTGCTAGGATCAGGAGACACGTTCTTTCTTGAAGCCACTGCCAACTGAATCCCACTTCTGCTGAGGACGTTCACAGGGAGGGCAAGAAGGATGCTTCTGGGGCCTGGGAACACTTGGGTAAGCCCTGATTGGCTATTCTAAGGTCTCACCTGAGCAAGGTCAGTCTGCAGCTGGAGTACAGAGGGCCGATACTGGTATTCTTGAACAAGGGCCTGAGCTGTGGAGGAGGGAGAGGGAGGTGATTGGGAGGGCTGATGAGGAGAGGCAGGGCAGAAATGAGATAGGTGGGTGGGGCTGACACCAGTGGGTAGGGCTTGTGACTCGGGGTCGAAGGTGATTCACATGGGATCTTCTTCTATATCCCGGGCATGGGTGATGCAGGTGGAATCTGGTAAGGTGGGCCAGGCAGAGTGAGATGGGTTGGACTCTCACCAGACCCTGTAGGACCCTCTCCGTGGTATTGAACTTCCTGGAGCCAGGGTGTCGCATGGCCTCCTCATACTGCAAGTTGGTGATGGTGAAGTTGAGGGTGAATGGCACCAGGAGAGGGCCAGGCACTGTAGTGGGAGTGAGAAACAAACACTATGTTCAGAAATAGAAAAATTATGGGTTTGCAATAGAATTATTTTTAAATATACACAGCATTAAACGGGATGGACAAAATGAAGAATTTTGATCCCTCCCTTAACTATAATGATAGAATTTTAAAAAACACATACTCTATCATATCAGTTGGATGCTAAGCCTAGCTTTCATTGTATGTTCATTGCTCAATAATGTCATGTTATCCTTTACCTTTGTTAGCGCCATCATAATCACCATCATTGTCACCTACAGCATCATTATTGTCATCATCACTGCCACCACCACCACCGTAATAATCCCCACAATCACCACCAGCACAACCATCACCACCATCATCATGATCATCAACATCATTACTGTCATCATCACTGCCACCATCATCACCATGATAATCCCCATCACCACCACCATAATCATCATCATCACCATCATTACTGCCATCATCACTGCCATCATCATCACCAGGATAATCCCCATTGTCATCATCATCATCACTATCATTGTCACCCACACCATAATTGTCATCATTACTGCCACACCACCACCACCATGATAATCTCCATCATCACCACCAGCACCAGAAACATCATCATCACCATCACCATCACTGTCACCCACACCATCATTGTTGTCACCACCACTTCCATGACCACCACCATGATCATCTCCATCATGACCACCAGCACTATCATTTATCACACTCAACACATCATCATTATCATAACCCCACCTTCATCCTCATCCTCACCTGTCATCATCCTCACCACCTTCATCATCATTATCATCATTGCTACCATAAGCATCACCATCATCATCAAAACCACCACCACTATCATCATCACCACCTGCCACAGGCATCATCACAAGAATATAAGCTCTCTGATGGCAGAGACTTTTATCTGTTTTGTATACTTGCTGTATCCCCAGGGTCTGGCACAGAGGAGGTGCCCAATAACATTTGTAGGTTGACGCAACATCACTAGATTTACTATGATTTTTACATTTATTTGAGTAAATAATGGCAGACATGTTGCTGCTCATCAATCATGCTCTAACAGAGGTGCCTTTGACTGGTACTTACCTATGGGTCTAGGTAGGGAGGATGGAGTTTCAGAGGTTCCTAGGTGTACTGTGGAGGTCCCAGGAGCTGAGGGAAAGACCTCATCAGTGAAAGCAGCAAGCTCTCTCATGGCAGAAATGCCAGTAGGTAAGACAATTTATGGGCCTTGCTGTATGTGGGGTTGGAGCTGGGTCTCTCCCTGGGGCACAGGGTAAAGGGAATAACTTGTGCCCATCCAGCTCCTTTGCTCATGAAAATAATAGAAAGGCATATGAAGTGGGTTCAGGTCCTGCCCTGCTTAATGTAGGGTTGGGGGCACTGGAATGTCAGTTGAATACTCACTGCTGGTGATGGGCACAAAGTTCCGATGGGTGAAACCTGCAGAGAGAGAGAGAGGAAGAATGGAGAATAAGAGTCAAAGGAGAGGTGGGTGACCAAATAGGGGTCAGGGTACCCTGGTTTAATGGAAGGAGTTTCATGGAACAAAGGCCATTGGAGATTCTCTATTACCACCCTCACGTCAAGGAAGAAGACCCTGAAGATATAACTCAGTGCAAGATGAAGAAGAAACCCTGAAGTTTAGATGTCAGCAATCACAAAAGACAAAGTGGCTGCACCTACAATAATCAGGCAGGAATGTGACCTCAAGCCAGAGAGTAGAGGCCACTCATCAAGAAGGAAAAGCCTGCAACCACATCACAGGCACTCACCATTGACATAGAGACTGCCTCTGTCCAGGAGGTAGGGGCCCAGCTCGATGATGCCACGGGTCAGTTTGCTCAGCTCCCAGTATAGCTGCTCTCTGTCCAGTCCAGGGTTTAGAGGGTCAAGGCGGTGAGTGCAGATGGTGTCCACGCCGGTGGCTGCCCCACGTTTTTCAGGCCTGAGGAGGATAAGTGAGGGGAATGACAATAAGTGGATTGCCTAGGAAGAGGTCCTGAGATTCCTGAGGGAAGGACAGGCAGGGGCCAGAGGAAGTGGTACAGAGGTGAGAAGCTACACATAGATTCTGTGAGTGCACCAACTCCCAGCCAGCCTGGGTCTATGAGCAGAATCATGGACACAAAAATATTTGTAACATTATAAAGTGGATCCTCTGTTCTCAGAAGATGGGGACAGGAGAGCTCAGACTTGAGACAGGTGAAGAGCTGGAATTGGGGATCAAAGCAAGTGGATGAGGCATGTTTGTGTTTGAAAGAAATGCTGGTTGTAGAGTTTATTATCTGCAGGAAAGGGAGGTGGTGGGAAAGGAGGGAACTTAGAGGGATGACCAGGGTAGGGGCCCTATCCTGCTGATGAGCTCTGCAGCATCACTGTTGAGTGGAGAGATGTTACTATCAGGGACACTTTGGTCCTGGAGCCACTGCCTCCTGGATTCCACCAGTGCTGAGGGCACCCCTAGGGAGGGCAGGAAGGAAGTTTTCCAAACTTCTTGGGACTGGGAACAATTGGAGAAGGTAGGCTGGCTCCTCTAAGGTCTCACCTGAGCAAGGTCAGTCTGCAGCCAGAGTACAGAGGGCCAACACTGGTGCTCTTGAACAAGGGCTTGAGCTGCAGAGGAGGGAGAGGGAGGTGAATGGGAGAGCTGAAGTGTAGGGGCATGGCAGACATGAGGTAGAAGGGGCTGGCATCAGTGGGCAGGGCTTGTATCTCTGGGACCCAGGAGTGGTGGGTGAGATCTTCTGTGGCCCTGGCATAGATGATGTAGGTGGGACTGGCAAAATGGTAGGGCTCTCACCAGACCCTGCAGGACTCTCTCCGTGGTGTTGAACTTCCTGGAACCAGGGTGACGCATGTCCTCCTCATACTGCAGGTTGGTGATAGTGAAGTTGAGGGTGAATGGCACCAGGAGAGGGCCAGGGGCTGCAGTGGGAGTGGGAAGTAAACACTATGTTCAAAAGTAGGAAAAATATGATATTGCAACGGACTTATTTTTAAACACGTGCAGAATTTATCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACGAGGTTGGGAGATCAAGACCATCCTAGCCAACATGATGAAACCCCGTCTTTACTTAAAAAAAAAAATACAAAAATGAGCTTGGTGTGGTGGCACGTCTGTAATCCCAGATATTTGGGGGCTGAGGCACAAGAATCACTTGAACCCACGAGGTGGAGGTTGCAATGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGCGACAGAGTGAGACTCTGTCTCAAAAAAACGAAACAAACAAACAAAAAACCATATGCAGCATTTAAAGTGATAGAATTTTGTAGAAAGCATACAATAGTAGGTAAATACTGAGCATAGCTCTTGATGCATATTCAGTGCTCAATATTGCCAAAAATTATCTATTCTCTGTTTCTACTATCATCATCATCACCATCATCCTCACTACCACCATTATTCTTGTCCTTCTCATTACCACCACTATCATCAGCATCACCATTATCATCATCATCACAGTCATCATCATCATGATCATCACCATTATCATCACCAACACCCACTTAATCATCATCATCATGGAAATATAAGCTCTCTGAATGCAGTTATTTTATCTCTTTTCTGTTCCCTGCTGTATCCCCGGGCATTAAAGTTTGTGACTTGATTTACCGTCACTAGATTTGCCATTACTTTTCATCTTTATTTGAGTCAACAGTGGCAGAGATGTTGGCACGCTCAGGCATGATCTAACAGAGGTGCCATTGACTGGTGCTCACCTGTGTGGCCAGGGAGGGAGGCTGGAGTCCCAGAGGTTTCCAGGTGCACTGCAGAGGTCCCAGGAACTGAGAATAAGCCCTCATTACTGAAAGCAGCAAACCCTCTCATGGTGGAAATGCCAGCAGGTAAAACTATTATGGGCCCCACTGCATTTGAGGTTTGAGCTGAGCCTCTCTATGAAGCTAGGACACAGGGAAAAGGAAATAAATTGTGCCCTCCAAGCCTTTTCCCATAAGAAGAGGATGTAAGGGGATAAGAGGTAAGGTCAGCTCCTGCCCTGCTTGGTGTAGGATTGGGGGGACTGGAACATCAGTAAAATACTCACTACTGGTGGTTGGCACAGAGCTCCGATGGGTGAAGCCTGCAGAGAGAGGGAGGGAGGAGACTGGTAAGGGTTAAGGAGAAGTCAGACCAAATAGGGGTCAGGGTTACCCTTGTGCAATGAGGAAAGTTTCATGAAGCATGGTCATTGGGATCCCTCACCAGCACCCTCATATGGGGGAAGAAGGCCCTGAGGGTGAAATCCGTGCAAGATGAAGATGAAACCATGAAGTTGAAACTTCAATCATCAGATATAGAGCACATCATCAAACCCTCAATGGTCAGAAAGGGCACGTGACCTCAGGACAAACAGTAGCATCTGCCCAGCTAGGAGGAAGAGCCTCCAATCACATCACGGCTGCTCACCATTGACATAGAGACTGTCCCTGTCCAGGGTGTAGGGGCCCAGCTCTGTAACGCTGTTGGTCAGCTGGCTCAGCTCCCAGTATAGCCGCTCTCTGTCCAGTCCAGGACCAGTGGGATCAAGGCGGAGGGTGCAGATGGCGTCCACTCCAGTGGCTGCCCCATGTTTCTCAGGTCTGGGGAGGGTAAGAGTGGGGAATGGCAATAAGTGGATTGCCTAGGGAGGGGTTCTGAGCTTACTGGGTGAAGGACAGGAAGGGGCCAGAGGAATTAAGAAGCCTGGTACAGAAGTGAGAGAAGCCACACTTTGATTCCCTGAGTGCTTCAACTCCCTGCCAGCTTGGGACTGTGAGCAGAGTCATGGATGCAAGGATTTCCATGAAATCACAAGGTGCAACCTGCATTCTCAGAGCAATGGAGAAAGAAGAGTTCAGTCCTGAGACAGGGGAAGAACAAGAATTAGGGGTGAAAGCAAGTAGATGAGTCATGTTTGGAGAGAAATTCTGGGAACAGAGTTTAACAACTGGAGGAAAGGGAGGTGGAGGGAATTTAGAGGGGTGATGGGTAAGGGATCAATCCTGCTGATGGACTCTGAAGAATTTGTCAGTTGGTGTGGGTAGGGCAGGAAGGAAGGTGAGCAAACTCTTTGGGCCTGGGAACAATTGGAGAAACCAGGCAGGAAATTCTAAGGTCTCACCTGAGCAAGGTCAGTCTGCAGCCAGAGTACAGAGGGCCAACACTGGTGCTCTTGAACAAGGGCTTGAGCTGTAGAGGAAGGGGAGGGAGGTGAGTGGGTGGGCTGAGGTGGAGGGACGGGGCAGACATGAGGTAGGAGGGTCTGGCATCACTAGGTGGGGCTGGCATCTCTGGGGCCAAGGAGTGGTGGGTGAGATCTTCCATGGCCCTGGCATGGGTGATATAAGCGGGACTGGTAAGGTGGTGGAGCTCTTACCAGACCCTGCAGAACCCTCTCCGTGGTGTTGAACTTCCTGGAACCAGGGTGTTGCATGTTTTCTTCATAATGCAGGTTGGTGATGGTAAAGTTGAGGGTGAATGGTATCAAGAGAGGGACAGGGGCTGTAAAGGGGTTGGGAAATAAACACTATGCTCAAAAGCAGAGAAATATATAAAAGTTTGCAATAGACTTATTTTTGAACATATGCCACAGGATTTAATGTGGATAAAAACTAAAAGATTTTCAAGCCTCTCTTGGCTAAAACGATAGAAGTTTTTCATAAAGAAGCATATTATATAATTGTAATTAGATGGTGAACACAGCGCTTGGTGCAGATTTAGTACTCAATAATGTCAGATGTTATTTTTTACCTCTGTTATTGCCACCTTCATCAGCAACATAACCATAGTTGTCGCCATGGCTATCATCACTTTCATCACCATCAACATCAGCACCACCATTACCACCATCCTCATCACCATCACCACCACAGTGATCATAATCAGCATCATTACCACCAGCACCATCATAATATTATCATTACCAGGATAACCACCAACACAATCATCATCATGATCATCATTGTCATCATCTTCATTATTCTCATTGTGAACATCACAATCATCATTGGCAATCATCATCATCACCACAATCATCTCAAACATCACCACTATCACCACAATCATCACATCACCACCATCACATCATCATTCCTGTTATAACCAGCATCACCATTATCACCATCATCTTCATCACCATCTCCATAATCACCGTCACCATCACCAACATCATCAGCAGCATCACCATCTTTATAGTCATCTCCATCATATCATCATCATCTCCATCTCCACCATCATCATCACCACCACCCTTATCATCCTCATCATCACAAGAATATAAGCTCTCTGAAGGAAGACATTTTTATCTCTTTTGTATTCCCTGCCATAATCCATGGGGCCTGGCACAGAGTAGGTGCTCAATAAAGTGTGTTGGTTGCATCAGCAACACTAGATTTGATCTGCTATGATTTTTCATCTTAATTTGCATGAAAATGACAGAGATGCAGACACTCACCATCGACTGGTATCATTGACTGACTGGTGCTCACCTGTGTGGCCAGGCAGGGAGGATGGAGTCCCAGAGGTTGCCAGGTGCACTGTGGAGGTCCCAGGAGCTGAGAAGAAGCTCTCATCAGTGAAAGCAGCAAGTCCCCTCATGGCAGAAATGTCAGCAGGTAAGACTACTATCGGCCCTGCTGCATTTGAGGTTTGAGCTGAGCCTCTTTATGGAGCTAGGGCACAGGGGAAAGGGAATAATTTGTGCCCTCCCAGCCTTTTCCCTCATGAAGAGGACATAAGGGGATAAGAGGTAAGGTCAGCTCCTGCCCTGCTTGGTGTAGGATTGGGGGGACTGGAACATCAGTAAAATACTCACTGCTGGTGGTTGGCACAGAGCTCGAGGGTTGAAGCCTGCAGAGAGAAGGAGGGAGAGTGGGTAAGGGTTAAGGAGAGGTCGGACCAAATAGGGATCAGGGTTACCCTAGTGCAATGAGGAAAGTGTAATGATGCATGGTCATTGTGATTCTTCACCACCACCCTCACATGGGGGAAGAAGGCCTTGAGGGTGAAATCGTGCAAGATGAAGATGAAACCATGAAGTTGAAACTTCAGTTATCACATATAGAGCACATCCTCAAAACCTCAATGGTCAGACAGGGCATGTGACCTCAGGACAGACAATAGAGTACCCCAGCAAGGAGGAAGAGACTCCAATCACATCACAGCTGCTCACCATTGACATAGAGACTGTCCCTGTCCAGGGTGTAGGGTCCCAGCTCTGTGATGCTGTTGGTCAGCTGGCTCAGCTCCCAGTATAGCCGCTCTCTGTCCAGTCCAGGTCCGATGGGATCAACGCGGTGGGTACAGATGGTGCCACTCCAGTGGCTGCCTCCTGCTTCTCAGGTCTGGGGAGGGTAAGAGTGGGGAATGGCAATGAATGGATTGCCTGGGGAGGGGTCCTGAAGCTTGCTGGGTAAGGGACAGGAAGGCACCAGAGGAATTGAGAAGCCTGGTACAGAAGTGAGAGAAACCACACTTTGATTCCCTGAGTGCTTCGACTCCCTGCCAGCCTGGGACTGTGAGCAGAGTCATGGATGCAAGGATTTTTATGAAATCACAAGGTGCAATCTACATTCTCACAGCAATGGGGAAAGAAGAGCTCAGTCCTGAGATAGGAGAAGAACAGGAATTAGGGGTGAAAGCAAGCAGATGAGGCATGTTTGTTTGGAGAGAAATTCTGGGAACAGAGTTTAACAACTGGAGGAAAGGGAGGTGGAGGGAATTTAGAGAGGTGATGAGGGTAAGGGCTCAATCCTGCTGATGGACTCCGAAGAATTTGTCAGTTGATGCGGGAGGTGGTAGAATCAGGAGACAAATTGGTTCTGGAGCCAGTGCCTCCTGAATTCTATCTGTGCTGCGGCCATCCTTTTGTAGGGCAAGAAGGAAGCTGAACAAATTCCTTGGGCCTGGGGACAACTGGGTAAGCCAAGCTGGAAATTCTAAGGTCTCACCTGAGCAAGGTCAGTCTGCAGCCAGAGTACAGAGGGCCAACACTGGTGTTCTTGAACAAGGGCTGAGCTGTGGAGGAAGCATAGGAAGGTAAGTGGGTGAGCTGAGGTGTAGGGATGTCTGACATGAGGTAGGAGAGGCTGGCATCAGTAGGCGGGGCTTGCATCTCTGGGGCCAAGGAGTGGTGGGTGAGATCTTCCATGGCCCTGGCATGGGTGATATAAGCGGGACTGGTAAGGTGGTGGAGCTCTTACCAGACCCTGCAGAACCCTCTCCGTGGTGTTGAACTTCCTGGAACCAGGGTGTTGCATGTTTTCCTCATAATGCAGGTTGGTGATGGTAAAGTTGAAAGTGAATGGTATCAGGAGAGGGCCAGGCTCTGTAAAGCGGTTGGGAAATAAACACTATGTTCAAAAGTAGAGAAATATATAACAGTTTGCAATATATTTATTTTTTAGTTTTTATTTTTTGCAATGAAGTCTCACTCTGTAGCCCAGGCTGAAGTGAAGTGGCGTGATATCGGCACACTGCAACCTCTGCCTCCTGGGTTGAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGTATACAGGTGCGTACCATCAGGCCTGGCTAATTTTTTTTTGTATTTTTAGTAGACATGGGGTTTCGCCATGTTAGCCAGGATGATCTTGATTTCCTGACCTTGTGATCTGCTTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCTACCGCGCCCGGCCACGATAGACTTATTTTTTAACGTATTCTACAGCATTTAACGTGAATGAAAAATAAAAGATTTTCATGCCTCTCTTTACTACAATGATAGAAGTTTTTCATAAGGAAGCATATTACATAATTGTAATTCGATGGTAAACACAGCTCTTGGTGTGGATTCAGTGCTCAATAATGTCAGATGTTATTTTTTACCTCTGTTATTGCCACCTTCATCAGCAACATAACCATAGTTGTCGCCATGGCTATCATCACTTTCATCACCATCAACATCAGCACCACCTCTACCACCATCCTCATCACTCACCACCACAGTGATCATAATCAGCATCATTACCACCAGCACCATCATAATATTATCATTACCAGGATAACCACACAAATCATCATCATCATCATCATCATCGTCATCATCTTCATTATTCTCATTGTGAACATCACAATCATCATTGGCAATCATCATCATCACCACAATCATCTCAAACATCACCACTATCACCACAATCATCACATCACCACCATCACATCATCATACCTGTTATAACCAGCACCACCATTATCACCATCATCTTCATCACCATCTCCATAATCATCACCATCACCAACATCATCAGCAGCATCACCATCTTTATAGTCATCTCCATCATATCATCATCATCTCCATCACCACAACCATCATCACCACCACCTTTATCATCCTCATCATCACAAGAATATAAGCTCTCTGAAGGAAGACATTTTTATCTCTTTTGTATTCCCTGCCATATTCCATGGGCCTGGCGCAGAGTGGGCGCTCAGTAAAGTGTGTTGGTTGCATCAGCAACACTAGATTTGATTTGCTATGATTTTCATCTTAATTTGCATGAAAATGACAGAGATGCAGACACTCACCATCGACTGGTATCATTGACTGGTGCTCACCTGTGTGGCCGGGAAGGAGGATGGAGTCCCAGTGGTTGCCCAGTACACTGTGGAGGTCCCAGGAGCTGAGAAGAAGCTCTCATCAGTGAAAGCAGCAAGTCCCCTCATGGCAGAAATGCCAGCACGTAAGACTATTATGAAACTTGATGCATATGGGGCTTGACCTAGATCAGTTTGTAGCTGGGTCAGAAGGGAGTATGAATCACTTCTGCCTTCCCAGCTCCTTCTCTTAAGAAGAGGAGCTATGGATTTATAAGGAGGAGGGTCAGCTTCTGCTCTGCTTTGTGTAGAATCAGGGGCATGAGATTATCAGTTGAATACTCACTACTGGTGGTGGGCACAGAGTTCTGATGGGTGAAACCTGCACAGAAAGAGGGAGTAACCTGAGTAAGGTTAAGGTAGAGGTGGATAACAAAATAGGGGTCAGGGCTACCCTGGTGAAATGGAACCGGGGCTGCTGGATGTTTCTATCAGGACCCTCACATCAGGGAAGAAAACCCTGAGGGTAGACCCAGTCTCCAACATAAAGAAGAAACCATGATGTTCTGACGTCAACTATCAAATATAGACAACATGGTCAAGCTTTCAATGGCCAGGCAGTGAGTGTGACCTCAAGCCAGGGAGTAGAGGTTGCCCATCAGAGAGGAAGAGCCTCCAACCACATCACAGCTGCTCACCATTGACATAGAGACTGTCCCTGTCCAGGCTGTAGGGGCCCAGCTCAGTGATGTTGTGGGTCAGCTGGCTTAGCTCCAGTACAGCTGCTCTCTGTCCAGCCCAGGTCTTTTGGGATTAGGGTGGTAGAGGCAGACAGCATCCATTCCAGTTGCTGCCCCATCCTTCTCGGGCCTGGGGAAAGGAGGTTGGGGGAATGACAATGAAAAGATTACCTAGGACAGGTCTTGAGATTGCTGATGGAAGGACAGCAAAGGAGAAGAGAAAATGAGAAACCTGGGAAAGAGGTGAGAAGCCACACTTAGATTCTCTGAGTGCACAGACTACCAGCTTGCTTGGGACCGTGAGTAGAGTCATGGATACAACAATTCTCATAAAAGTGCAAGGGTGAAACTTGCATCTCATGGCATGAGAAAAAAGAGCCCAGACTTGAGACCAGTGAAGATCTTGAAATGGGGATGAAAGCACGTGGCTGAGGCATGATTGTCTTGAGAGAAATCCTGGGGACAGAATTTAACACCTAAAGGAAAGGGAGATGGAGGGAAAGGAGGGAATTCAGAGGAATGATCAGGGTAGGAGCTCAATCCTGATGATGGACCATGCAGATTCCGTTGAGGTGAGGTGTGGGGTTGTTACTATCAGGAAACACACTGGGTCCTGAAGCTAGTGACTCCTGAATTCCACCTTTGGTGAGGGTATCCCTAGGAAGTGTATAAAGGAAGATGTGCGAAGTCTATTGGGGTGATAATAATTGGGGCAGCCAGGCTGGCTGTTCTAGCCTCACCTGAGAGAGGTCAGTCTGCAGCCAGAGTACAGAGGGCCAACACTGGAGTTCTTGAAATGGGACTAAGCTGTGGGGGAGGGAGAGAGAGGTAAGTAGAGGGCTAAGGTCCCTGTGTGGGGACAAAAGTGAGGTGGGTGGGGCAGACACCCATGAGAGTGGCTGGCCTCAGTGGGTGAGGCTTGCATCTCTGGGGATGAGGGCAAGGTTGGTGCGATATTCTTCCATTGCCCTGGCATGAATGTTGTATGAGGGGCTCGGCATCCAGGGCGGGGAGAGTGAAGAGGGCAGGGTGCTAACCAGACCCTGCAGGACCCTCTCTGTGGTGTTGAACTTCCTAGATCCAGGGCGATGCATGTCCTCCTCATACTGCAGGTTGGTGATGGTGAAGTTTAGGGTGAATGGCACCAGGAGAGGGCCAGCAGCTGTAGTGGGAGGGGGAAATAAACACTATGTTCAAAGTGGAGAAAATAAGAGTTTGCAACAGACTTATCTTTAAACATGTGCAACATTTAAATTGAATGACTAAATAAATATTTACCGTGCATCCCTTCCCTATGACAGAATTTATTTATTTATTTATTTATTGAGATGGAGTCTCGCTCCGTCACCAAGCTAGAGTGCAGTGGTGCCATCTCGGCTCACTGCAATCTCCACCTCACTGCAATCTCCACCTCCTGGATTCAAACGATTCTCCTGACTCAGCCTCCCAAGTAGCTGGGACAGGCATGTACCACCACGGCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAGGAGAGTCTTGATCTCTTGACCTCGTGATCTACCCACCTTGGCCTCCCAAAGTGCTGAGATTATAGACGTGAGCCACCACACCCGGCCCGACATAATTTATTTTTTAAAGGATGTTTTATAATAGTAGTTAGATGCTGAGCGTAGCTCTTGGTGTATATTCAGAGCATAATATTGTATGATGTTATCTGTTATCTTTTTATTGCCATCATCATTGTTGCTATCATTGTCACCATCACCATTATTATTATTATCACCACCACCTTAATAATCCCAAGCATGACCACCACAAACATCATCATCACCACACTCAACACATCATCACAAACATCATAACTGTCACTGACATGCTGATGTCCATCCTCATCATGGTCAGCACCACCACCACCATTATCATCAATAGCATCACTATCATCATCGTCATCATAATCATCATAAACAGCACCACCACCATCATCATCATCCCACTCAACATATCATGATTAATATCATAACCACCACCACCACCA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_16241:HG2_PB_SVrefine2Falcon1plusDovetail_5537:HG2_Ill_SVrefine2DISCOVARplusDovetail_5876:HG2_PB_SVrefine2PBcRplusDovetail_5093:HG4_PB_SVrefine2PBcRDovetail_8969:HG2_PB_SVrefine2PB10Xhap12_13035:HG2_PB_SVrefine2Falcon2Bionano_8779:HG4_Ill_SVrefine2DISCOVARDovetail_12427:HG3_Ill_SVrefine2DISCOVARDovetail_12651:HG3_PB_SVrefine2PBcRDovetail_8733:HG4_PB_SVrefine2Falcon1Dovetail_11125:HG3_PB_SVrefine2Falcon1Dovetail_11106:HG2_PB_PB10Xdip_16242;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5537;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00363636;ClusterMaxSizeDiff=0.00363636;ClusterMaxEditDist=0.00849142;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=14828;DistBack=147;DistForward=27;DistMin=27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=19:9007242-9007269;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9976;PctRecOverlap=0.9976;SizeDiff=-36;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=2539.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:98:1/1:0:21:0:30:./.:0:17:1:17:1/1:1:46:1/1:0:680:.:.:.
chr19	9177540	HG2_10X_SVrefine210Xhap12_12424	A	TTTTTTTTTTTTTTTAGATGGAGTCTTGCTCTGTCGCCAGGCTGGAGTACGGTGGCGTGATCTTGATTCACTGCAACCTCCGCCTCCCGAGTTCAAGTGATTCTTCTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCAGTGCCACCATTTTTGTAATTTTAGTAGATTTTTGTACTTTTAATAGAGACAGGGTTTCACCATGTTAGCTAGGCTAATCTCGAACTCCTGGCCTCAGGTGATCTGCCCGCCTCGGCCTTTCAAAGTGCTGGCATTACAGGCCTAAGCCACCAGGCCCGGCCTATTTTTTTT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13036:HG4_PB_pbsv_17830:HG3_PB_pbsv_17618:HG2_PB_pbsv_17917:HG4_PB_HySA_25969:HG3_PB_HySA_26928:HG2_PB_HySA_32503:HG2_Ill_MetaSV_2256:HG4_Ill_MetaSV_2323:HG2_Ill_GATKHCSBGrefine_11700:HG3_Ill_MetaSV_2401:HG3_Ill_GATKHCSBGrefine_11598:HG2_PB_PB10Xdip_16244:HG2_PB_PB10Xdip_16243:HG4_PB_SVrefine2Falcon1Dovetail_11126:HG4_Ill_SVrefine2DISCOVARDovetail_12428:HG2_Ill_SVrefine2DISCOVARplusDovetail_5877:HG2_10X_SVrefine210Xhap12_12424:HG3_PB_SVrefine2PBcRDovetail_8734:HG2_PB_SVrefine2Falcon2Bionano_8780:HG3_PB_SVrefine2Falcon1Dovetail_11107:HG4_PB_SVrefine2PBcRDovetail_8970:HG2_PB_SVrefine2Falcon1plusDovetail_5538:HG2_PB_SVrefine2PBcRplusDovetail_5094;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12424:HG2_Ill_SVrefine2DISCOVARplusDovetail_5877:HG4_Ill_SVrefine2DISCOVARDovetail_12428;NumExactMatchSVs=3;ClusterMaxShiftDist=0.101695;ClusterMaxSizeDiff=0.101695;ClusterMaxEditDist=0.161585;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=311;DistBack=2767;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=279;REFWIDENED=19:9177541-9177819;PctSeqSimilarity=0.9746;PctSizeSimilarity=0.9599;PctRecOverlap=0.8677;SizeDiff=-13;StartDistance=-36;EndDistance=-36;GTMatch=0;TruScore=93;MatchId=2541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:45:1/1:0:17:0:23:./.:2:2:0:4:0/1:2:8:1/1:2:40:.:.:.
chr19	9602516	HG2_Ill_GATKHCSBGrefine_11702	A	AATTCTTAAGACAGCATATACCACATTTCAATGTGCTTTAACCCATCTACAGGGATGGTTATAATGCTTACAAGTGAGTGAACACCAAGTGATTGCAGTGCACCAAGCTCAGACTGCAGTACAGATTTTTAAGCACTTGGTCGATATAATCCACCAGATACAATGATACTCAAAGTATCCATAGTAAATAATATGTTGCTGGAAGCCTCTAGCAAGCACCAGTAGGAAAATCATAGCAGTAGTTCAGAATAAATATATTCCCTCTTCTGCAGGAAACTAGTCTCCTTTTGAGTAAACAGTTACTACTGGGTTCAACACAGAAGTTGTACATGGGACATCAAGTGACCAAGTGGCCTGAGCTTCCTACCATGAACTTGAGGTTGTCTGACCCACAAAACTCCAAGTTCGGGGAAAATGCAGCAGCAATCTGTTATCAAATGGAAATGGCACAGAAGACATTGAGCTCTAGAAGTTCCAGCGAGTACAAGTAAACTGCATGAGCAAATGGCAAAGACTCAACACAAGCTCCATTCCCACTGTCTCATTTCCCTCAATCCATGCCTGTGGCTTCCTGAGCTATTTCTTATGCCTATCTGAGACAAGTCCTGTTTATGGATGTGTCTGCACAATATGCTAGCATGACCCAAAAGTGGGAGCACAAACACAACAGCTCAGCTGAACGATGACACCGAAAGACTGTAATATCTTTCAGATAAAAATAGCATCCCAGTGGCAGAACTTCTCACAGTATATTTGACTATCCTCTGGGTCTGGAGGACATGGCCAGAAGGACATGTAAACAATGATCCATGAACAGTTGCTAATGGTTTCACTGAATGGTCAAGGATGTATATGGAACAAGACTGGTAAGTCTAGAAAAACATGTATGGATAGCTCTCTTAAAGGACATGGGCCGTGAAGATATTTGTGTCCCATGTAAATGGCCAGCAAAGGCAATCCACTGAAAATGAGACTTTTAATAATCAGATGGACAAAATGATACTCTATATAGAAGTCAATTGCTTTCCCCTGCCACCCCAATGTTTGCTCCATAGGCCCTTGAATAAGATGGCCAT	20	PASS	ClusterIDs=HG4_Ill_Spiral_1380:HG2_PB_pbsv_17921:HG4_PB_assemblyticsfalcon_12095:HG4_PB_pbsv_17834:HG2_PB_SVrefine2Falcon1plusDovetail_5540:HG3_PB_assemblyticsfalcon_12287:HG4_Ill_SVrefine2DISCOVARDovetail_12430:HG4_Ill_GATKHCSBGrefine_12073:HG2_Ill_SVrefine2DISCOVARplusDovetail_5882:HG2_Ill_MetaSV_2257:HG2_Ill_GATKHCSBGrefine_11702:HG2_10X_SVrefine210Xhap12_12426:HG4_PB_SVrefine2Falcon1Dovetail_11128:HG4_PB_SVrefine2PBcRDovetail_8972:HG3_PB_SVrefine2Falcon1Dovetail_11109:HG2_PB_SVrefine2PB10Xhap12_13039:HG2_PB_PB10Xdip_16251:HG4_PB_HySA_25973:HG2_PB_HySA_32509;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12426:HG2_Ill_GATKHCSBGrefine_11702:HG2_Ill_MetaSV_2257:HG2_Ill_SVrefine2DISCOVARplusDovetail_5882:HG4_Ill_GATKHCSBGrefine_12073:HG4_Ill_SVrefine2DISCOVARDovetail_12430;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0798497;ClusterMaxSizeDiff=0.0760921;ClusterMaxEditDist=0.227337;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=1075;DistBack=0;DistForward=27454;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=19:9602517-9602517;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:40:0|1:35:0:0:31:1|0:0:15:28:0:0/1:12:8:0/1:40:62:.:.:.
chr19	10868923	HG4_PB_SVrefine2PBcRDovetail_8977	T	TTCCTTCCCTCCTTCCTTCCCTCCTTCCTTCCTCCCTCCTTCCTTCCCTCCCCTCCTTCCTTCCCTCCCCCTCCTTCCCTCCCTCCTCCTTCCCTCCCTCCTTCCTTCCCTCCTTCCTTCCCTCCTCTTCCTTCCCTCCTCCTTCCTCCCTCCTTCCCTCCTTCCTTCCTTCCCCTCCTTCCTTCCTTCCCCTCCTTCCCTCCCTCCTTCCTTCCCTCCTTCCTTCCCTCCTCCTTCCCTCCCTCCTTCCTTCCCCTCCTTCCTTCCCTCCTCCTTCCTTCCCTCCCTCCTTCCTTCCCTCCCTCCTTCCTTCCCCTCCC	10	PASS	ClusterIDs=HG4_PB_pbsv_17840:HG4_PB_SVrefine2PBcRDovetail_8977:HG3_PB_pbsv_17626:HG2_PB_SVrefine2Falcon2Bionano_8785:HG2_PB_SVrefine2PB10Xhap12_13044:HG2_PB_SVrefine2Falcon1plusDovetail_5544:HG3_PB_SVrefine2PBcRDovetail_8738:HG2_PB_SVrefine2PBcRplusDovetail_5099:HG4_PB_SVrefine2Falcon1Dovetail_11131:HG3_PB_SVrefine2Falcon1Dovetail_11114;NumClusterSVs=10;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_8977;NumExactMatchSVs=1;ClusterMaxShiftDist=0.286614;ClusterMaxSizeDiff=0.286614;ClusterMaxEditDist=0.289764;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=319;DistBack=-319;DistForward=-1;DistMin=-319;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=317;REFWIDENED=19:10868924-10869240;PctSeqSimilarity=0.9545;PctSizeSimilarity=0.9755;PctRecOverlap=0.4312;SizeDiff=-8;StartDistance=-182;EndDistance=-182;GTMatch=0;TruScore=78;MatchId=2543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:26:1/1:0:10:1:10:./.:17:7:13:5:0/0:12:0:0/1:8:5:.:.:.
chr19	10909317	HG2_Ill_SVrefine2DISCOVARplusDovetail_5889	G	GCATGCTGACAGCTGCATATGGCAAAGTAACCCTTACCTCAATCAAGATACAGAGCGGTTCCGTCACCTCCTAAAATCCCTGTCCCTAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5889:HG2_PB_pbsv_17928:HG2_PB_HySA_32522:HG3_PB_pbsv_17627:HG3_Ill_SVrefine2DISCOVARDovetail_12661:HG2_PB_SVrefine2Falcon1plusDovetail_5545;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5889:HG3_Ill_SVrefine2DISCOVARDovetail_12661:HG2_PB_SVrefine2Falcon1plusDovetail_5545;NumExactMatchSVs=3;ClusterMaxShiftDist=0.125714;ClusterMaxSizeDiff=0.102857;ClusterMaxEditDist=0.251429;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=88;DistBack=40209;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=264;REFWIDENED=19:10909318-10909581;PctSeqSimilarity=0.997;PctSizeSimilarity=1;PctRecOverlap=0.1461;SizeDiff=0;StartDistance=-76;EndDistance=-76;GTMatch=0;TruScore=71;MatchId=2544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:33:0|1:15:4:2:28:./.:3:0:3:2:0/1:25:4:./.:.:.:.:.:.
chr19	11723881	HG2_PB_SVrefine2PBcRplusDovetail_5100	C	CCCCTCCCCTCCCTCCCTTCCCCCCTCCCCTCCCCTCCCCTCCCTCCCTTCCCCCCTCCCCTCCCCTCCTTCCCCCCTCCCCTCCCCTCCTTCCCCCTCCCCTCCCCTCCTTCCCCTCCCTCCCTCCTTCCCCCCCCTCCCCTCCTTCCCCCCTCCCCTCCCCTTCCTCATCCCCTTCCCCTCCCCTTCTTCCTCTCCTCCTCCCTCCCCCCTCCCCTTCCCTCCTCCCTCCCCCCTCCCCTCCCCCTTCTTCCTCCCCTTCCCCCTCCCCTCCCCCTTCCTCCTCCCCTTCCTCCTCTCCTCCTCCCTCCCCCTCCCTCCCCCTTCCCTCCTCCCTCCCCCTCCCTCCCCTTCCTCCTCCCCTTCCCCCTCCCCTCCCCCTTCCTCCTCCCCTTCCCCTTCCCCTTCCTCCTCTCCTCCTCCCTCCCCTCCCCCTCCCTCCCCTCCCCCTTCCCTCCTCCCTCCCCTCCCCCTTCCCTCCTCCTCCCCTCCCCCTCCCCTACCCTCCTCCCTCCCCTTCCCTCCTCCCTCCCCCTCCCGTCCCCTCCTCCTCCCCCTCCCCTCCCCCTCCCCCTCCTCCCTCCCCCTCCCCTCCTCCCTCCCCTCCCCTCTCCCCTCCCCCTCCCCTCCCCTCCCCCTCTCCTCCCCCTCCTCTTCCCCTCTCCTCCCCTCCCCCATCCCCCTCCTCCCCTCTCCCCTCCCCTCCCCTTCCCTTCCCCTCTCCTCCCCTCCTCCCTCCCCTCCCCATCTTCCCTCCCCTCCCCATCTT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11115:HG4_PB_pbsv_17841:HG2_PB_SVrefine2Falcon1plusDovetail_5546:HG2_PB_pbsv_17929:HG2_PB_SVrefine2Falcon2Bionano_8786:HG3_PB_pbsv_17628:HG4_PB_SVrefine2Falcon1Dovetail_11132:HG2_PB_SVrefine2PBcRplusDovetail_5100:HG2_PB_SVrefine2PB10Xhap12_13045:HG3_PB_SVrefine2PBcRDovetail_8739;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5100;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0982265;ClusterMaxSizeDiff=0.0982265;ClusterMaxEditDist=0.252066;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=768;DistBack=648;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=965;REFWIDENED=19:11733674-11723986;PctSeqSimilarity=0.9784;PctSizeSimilarity=0.9783;PctRecOverlap=0.8892;SizeDiff=-17;StartDistance=-79;EndDistance=-79;GTMatch=1;TruScore=94;MatchId=2545.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:2:19:0:26:./.:0:1:0:3:./.:0:0:0/1:6:18:.:1159:.
chr19	13100621	HG2_Ill_GATKHCSBGrefine_11713	G	GGAAGGCTGGGTGTTGTGTGTGTGCGTATGGAAGGCTGGGGGTGTGTGTGCGTATGGAAGGCTGGGTGTGTGTGTGTGCGTATGGAAGGCTGGGTGTTTGTGTGCGTATGGAAGGCTGGGGTTGTGTGTGTGCGTATGGAAGGCTGGGGTTGTGTGTGTGCGTATGGAAGGCTGGGGGTGTGTGTGTGCGTATGGAAGAATGGGTGTTGTCTGTGTGGATGAAGGATGGGTGTTGTCTGTGTGGATGAAGGATGGGTGTTGTGTGTGTGCACGTGAAAGGATGGGCGTTGTGTGTGCTTATGCAAAGCTGATGTGTGTGTGGATGAAGGATGTCGTGCATGTGTGTCAGTGAAGGCTGAGTGTGTGCATGTGTGTCAATGAAGGATGGATGTTGTGTGTGTGAATGAAGGATGGGTGTTGTGCATGTGTGTCAGTGAAGGATGGGTGTTGTGCGTGTGGATGAAGGATGAGTGTTGTGTATGTGAATTAAGGATAGGTGTTGTGTGTGTGAACAAAGGATAGGTGTTGTGTGTGTGGATGAAGGCTGGGTGTTATTTGTGTGGGTGAAGGATGGGCATTGTGTGTGTGGATGAAGTATGAGTGTTTTGTGTGTGTGTGGATGAAGGATGGGCATGGTGTGTGCGGTGGGGCTGGGTTGATGGTTTGAGC	20	PASS	ClusterIDs=HG4_PB_pbsv_17848:HG3_PB_assemblyticsfalcon_12316:HG3_PB_pbsv_17634:HG3_PB_SVrefine2Falcon1Dovetail_11120:HG4_Ill_GATKHCSBGrefine_12086:HG3_PB_SVrefine2PBcRDovetail_8743:HG2_PB_assemblyticsPBcR_11888:HG2_PB_SVrefine2PBcRplusDovetail_5107:HG2_Ill_SVrefine2DISCOVARplusDovetail_5903:HG2_Ill_GATKHCSBGrefine_11713:HG2_PB_SVrefine2Falcon1plusDovetail_5551:HG2_PB_HySA_32544:HG2_PB_PB10Xdip_14622:HG2_Ill_breakscan11_4826:HG4_PB_SVrefine2Falcon1Dovetail_11136:HG2_PB_SVrefine2PBcRplusDovetail_5108:HG2_PB_SVrefine2PB10Xhap12_13052:HG2_PB_SVrefine2Falcon2Bionano_8788:HG4_PB_SVrefine2PBcRDovetail_8983:HG2_PB_pbsv_17934;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11713:HG2_Ill_SVrefine2DISCOVARplusDovetail_5903:HG2_PB_SVrefine2PBcRplusDovetail_5107:HG2_PB_assemblyticsPBcR_11888:HG3_PB_SVrefine2PBcRDovetail_8743:HG4_Ill_GATKHCSBGrefine_12086;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0697168;ClusterMaxSizeDiff=0.0682643;ClusterMaxEditDist=0.227596;PBcalls=16;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=668;DistBack=-1;DistForward=28522;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=19:13100622-13100621;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2546.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:./.:1:11:0:2:1/1:3:266:2:380:1/1:0:9:1/1:2:80:.:.:.
chr19	13332040	HG2_PB_SVrefine2PBcRplusDovetail_5109	C	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTT	20	PASS	ClusterIDs=HG3_PB_pbsv_17635:HG3_PB_SVrefine2PBcRDovetail_8744:HG2_PB_HySA_32546:HG2_PB_SVrefine2Falcon1plusDovetail_5552:HG2_10X_SVrefine210Xhap12_12454:HG2_PB_assemblyticsPBcR_11890:HG2_PB_SVrefine2PBcRplusDovetail_5109:HG2_PB_SVrefine2PB10Xhap12_13053:HG2_PB_SVrefine2Falcon2Bionano_8789:HG3_Ill_GATKHCSBGrefine_11607:HG2_PB_PB10Xdip_14623:HG4_PB_pbsv_17849:HG2_PB_pbsv_17935;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13053:HG2_PB_SVrefine2PBcRplusDovetail_5109:HG2_PB_assemblyticsPBcR_11890;NumExactMatchSVs=3;ClusterMaxShiftDist=0.226537;ClusterMaxSizeDiff=0.226537;ClusterMaxEditDist=0.252308;PBcalls=11;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=158;DistBack=-1;DistForward=7;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=19:13332028-13332063;PctSeqSimilarity=0.985;PctSizeSimilarity=1;PctRecOverlap=0.9497;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=1;TruScore=97;MatchId=2547.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:39:./.:3:10:1:22:1/1:0:11:1:6:1/1:0:16:./.:.:.:.:.:.
chr19	13620854	HG4_PB_pbsv_17850	A	AAAGGAAGGGAAGGAAGAAGGAAGGAAGGCAAGGAAGGGAGGCAGAGGGAGGAGGGGAGGAGGGAGGGAGGAGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8984:HG2_PB_HySA_32548:HG4_PB_HySA_26005:HG4_PB_pbsv_17850:HG2_PB_pbsv_17936;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_17850;NumExactMatchSVs=1;ClusterMaxShiftDist=0.160584;ClusterMaxSizeDiff=0.160584;ClusterMaxEditDist=0.238806;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=73;DistBack=2;DistForward=20;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=19:13620853-13620855;PctSeqSimilarity=0.913;PctSizeSimilarity=0.9605;PctRecOverlap=0.9091;SizeDiff=-3;StartDistance=5;EndDistance=5;GTMatch=0;TruScore=92;MatchId=2548.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:28:0|1:30:2:5:25:./.:19:0:5:13:0/1:9:3:./.:.:.:.:.:.
chr19	13646816	HG2_PB_PB10Xdip_14624	T	TATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATAATATATACACATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACACATATATATATTTTGTAGAAATATATATATACAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11121:HG2_PB_PB10Xdip_14624:HG3_PB_pbsv_17636:HG2_PB_pbsv_17938:HG4_PB_SVrefine2Falcon1Dovetail_11139:HG2_PB_pbsv_17937:HG2_PB_SVrefine2Falcon1plusDovetail_5553:HG4_PB_SVrefine2PBcRDovetail_8985:HG4_PB_SVrefine2Falcon1Dovetail_11137:HG2_PB_HySA_32549:HG3_PB_SVrefine2PBcRDovetail_8745:HG2_PB_SVrefine2PB10Xhap12_13054:HG2_PB_SVrefine2Falcon2Bionano_8790:HG2_PB_SVrefine2PBcRplusDovetail_5110;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_14624;NumExactMatchSVs=1;ClusterMaxShiftDist=0.283677;ClusterMaxSizeDiff=0.282092;ClusterMaxEditDist=0.32498;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=645;DistBack=90;DistForward=32;DistMin=32;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=270;REFWIDENED=19:13646817-13647086;PctSeqSimilarity=0.9843;PctSizeSimilarity=0.969;PctRecOverlap=0.969;SizeDiff=20;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=97;MatchId=2549.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:110:1/1:0:17:0:17:./.:0:1:0:0:./.:0:3:0/1:3:11:.:669:.
chr19	13814531	HG2_PB_pbsv_17941	G	GGGAGGTTGGGGGGTCAGCCCTCCGCCCGGCAGCCGCCGCGTTCGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAAGCCCCTCTGCCCGGCAGAAACCGCCCCGTCCGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8792:HG4_PB_SVrefine2Falcon1Dovetail_11141:HG4_PB_pbsv_17855:HG2_PB_pbsv_17941:HG3_PB_SVrefine2Falcon1Dovetail_11126;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_17941;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.186047;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=128;DistBack=-54;DistForward=33795;DistMin=-54;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=322;REFWIDENED=19:13814516-13814837;PctSeqSimilarity=0.9668;PctSizeSimilarity=0.9922;PctRecOverlap=0.8217;SizeDiff=1;StartDistance=22;EndDistance=22;GTMatch=0;TruScore=92;MatchId=2550.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:25:0|1:23:3:3:19:./.:5:0:1:0:0/0:11:0:./.:.:.:.:.:.
chr19	13848327	HG2_Ill_SVrefine2DISCOVARplusDovetail_5911	G	GCGGTGGCTCACACCTGTAATCCCAGCACCTTGGGAGGCCGAGGCAGGTGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGGCAAAATCCCGTCTCTACTAAAAATACAAAAATTAGATGGGCGTGGTGGCACACACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGTCGAGATCACGCCACTGCACTCCTGCCTGGGTGACAGAGCAAGACTCCGTCTCAAAAAAAGCAGGTGGATGCTGGCGGGACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13057:HG4_PB_pbsv_17856:HG2_PB_PB10Xdip_14632:HG2_PB_HySA_32557:HG4_PB_HySA_26014:HG2_PB_pbsv_17942:HG3_PB_SVrefine2Falcon1Dovetail_11127:HG4_Ill_SVrefine2DISCOVARDovetail_12461:HG2_Ill_SVrefine2DISCOVARplusDovetail_5911:HG2_PB_SVrefine2Falcon1plusDovetail_5556:HG4_PB_SVrefine2Falcon1Dovetail_11142:HG2_PB_SVrefine2PBcRplusDovetail_5112;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5911:HG4_Ill_SVrefine2DISCOVARDovetail_12461;NumExactMatchSVs=2;ClusterMaxShiftDist=0.135593;ClusterMaxSizeDiff=0.135593;ClusterMaxEditDist=0.246795;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=300;DistBack=33795;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=277;REFWIDENED=19:13848328-13848604;PctSeqSimilarity=0.9814;PctSizeSimilarity=0.9934;PctRecOverlap=0.6634;SizeDiff=-2;StartDistance=-101;EndDistance=-101;GTMatch=0;TruScore=87;MatchId=2551.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:28:0|1:22:0:2:25:./.:4:0:1:2:0/1:17:17:./.:2:10:.:.:.
chr19	14200846	HG3_Ill_SVrefine2DISCOVARDovetail_12677	C	CGGCGGCGGCTGTGGCTGCGGCGGCGGCGGCTGCTGCTGCTGTGGCGGCGCCGGCGGCTGTGGCGGCGGCGGCAGCGGCGGCTCCCGGGCGGCGACGGCGGGCGGGGGGGCGCGGCGCGGGCCGGCCGGGGGCGCCACCGCCGGGGGAGCGGCTGGCGCGGGCGGCGGCGCGGCCAGGGGCGCGGCCCGCTGCGCGCGGGGGCCCGGCTGCGCGGGGCCAGGCGAGGGGGGCGCTGTGGCGGCGGCGGCGGCCGCGCGGGGCGCCCGGGCCGGGGCGGCGGCGGCGACGGGCGCGGGCGGTGGCGGCGGGGCGGGCGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5558:HG3_PB_pbsv_17640:HG2_PB_pbsv_17944:HG4_PB_pbsv_17858:HG4_PB_SVrefine2Falcon1Dovetail_11144:HG2_PB_PB10Xdip_14635:HG2_Ill_breakscan11_4827:HG4_PB_HySA_26015:HG4_Ill_MetaSV_2330:HG4_Ill_GATKHCSBGrefine_12092:HG3_Ill_MetaSV_2405:HG3_Ill_GATKHCSBGrefine_11609:HG2_Ill_GATKHCSBGrefine_11716:HG2_PB_SVrefine2Falcon1plusDovetail_5559:HG2_Ill_MetaSV_2264:HG2_PB_HySA_32560:HG4_PB_SVrefine2PBcRDovetail_8989:HG3_Ill_SVrefine2DISCOVARDovetail_12677:HG2_PB_SVrefine2PBcRplusDovetail_5114:HG2_PB_SVrefine2PB10Xhap12_13059:HG2_PB_SVrefine2Falcon2Bionano_8794:HG2_Ill_SVrefine2DISCOVARplusDovetail_5914:HG3_PB_SVrefine2PBcRDovetail_8748:HG3_PB_SVrefine2Falcon1Dovetail_11129;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5914:HG2_PB_SVrefine2Falcon2Bionano_8794:HG2_PB_SVrefine2PB10Xhap12_13059:HG2_PB_SVrefine2PBcRplusDovetail_5114:HG3_Ill_SVrefine2DISCOVARDovetail_12677:HG4_PB_SVrefine2PBcRDovetail_8989;NumExactMatchSVs=6;ClusterMaxShiftDist=0.143791;ClusterMaxSizeDiff=0.117264;ClusterMaxEditDist=0.232026;PBcalls=15;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=318;DistBack=18729;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=19:14200847-14200902;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.9907;PctRecOverlap=0.8411;SizeDiff=-3;StartDistance=-50;EndDistance=-50;GTMatch=0;TruScore=93;MatchId=2552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:62:1/1:1:8:0:5:./.:0:0:0:0:1/1:0:16:./.:2:5:.:.:.
chr19	14488489	HG2_Ill_GATKHCSBGrefine_11718	T	TATATAATTATTATACATAATAATTATATTATATAATTATTATACATAATAATTATATA	10	PASS	ClusterIDs=HG4_Ill_GATKHCSBGrefine_12097:HG3_Ill_GATKHC_28106:HG3_Ill_GATKHCSBGrefine_11614:HG2_Ill_GATKHC_28194:HG2_Ill_GATKHCSBGrefine_11718:HG4_Ill_GATKHC_28196;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11718:HG2_Ill_GATKHC_28194:HG3_Ill_GATKHCSBGrefine_11614:HG3_Ill_GATKHC_28106;NumExactMatchSVs=4;ClusterMaxShiftDist=0.15625;ClusterMaxSizeDiff=0.15625;ClusterMaxEditDist=0.171875;PBcalls=0;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=58;DistBack=19;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=13;REFWIDENED=19:14488488-14488503;PctSeqSimilarity=0.8458;PctSizeSimilarity=0.6667;PctRecOverlap=0.5287;SizeDiff=-29;StartDistance=27;EndDistance=27;GTMatch=1;TruScore=68;MatchId=2553.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:14:./.:7:5:11:1:./.:0:13:1:9:./.:2:14:./.:.:.:.:.:.
chr19	14841271	HG4_Ill_manta_4059	T	TTTTTCTTCCATCTTCCTTTTTTCTTTCTTCCCTTCCTCCTTCCCTCCCTTCCTCCCTTC	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_7728:HG4_Ill_svaba_21984:HG4_Ill_manta_4059:HG4_Ill_Krunchall_24189:HG4_Ill_GATKHC_28202:HG4_Ill_GATKHCSBGrefine_12100:HG4_Ill_250bpfermikitraw_23156:HG4_Ill_150bpfermikitraw_22262:HG2_Ill_svaba_22009:HG2_Ill_manta_4773:HG2_Ill_Krunchall_23820:HG2_Ill_GATKHC_28200:HG2_Ill_GATKHCSBGrefine_11721:HG2_Ill_250bpfermikitraw_23505:HG2_Ill_150bpfermikitraw_22130:HG2_PB_HySA_32577:HG4_PB_HySA_26033;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22130:HG2_Ill_250bpfermikitraw_23505:HG2_Ill_GATKHCSBGrefine_11721:HG2_Ill_GATKHC_28200:HG2_Ill_Krunchall_23820:HG2_Ill_manta_4773:HG2_Ill_svaba_22009:HG4_Ill_150bpfermikitraw_22262:HG4_Ill_250bpfermikitraw_23156:HG4_Ill_GATKHCSBGrefine_12100:HG4_Ill_GATKHC_28202:HG4_Ill_Krunchall_24189:HG4_Ill_manta_4059:HG4_Ill_svaba_21984;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.13913;PBcalls=2;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=7;DistForward=6458;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=19:14841270-14841272;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:34:0|1:33:0:1:31:0|1:31:0:0:22:0/1:9:17:./.:.:.:.:.:.
chr19	15045164	HG3_PB_assemblyticsfalcon_12340	GCATAATTTTT	TTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	10	PASS	ClusterIDs=HG3_PB_pbsv_17647:HG4_PB_pbsv_17869:HG4_PB_HySA_26036:HG3_PB_HySA_26985:HG2_PB_pbsv_17953:HG3_PB_assemblyticsfalcon_12340:HG2_PB_assemblyticsPBcR_11914:HG2_PB_SVrefine2Falcon1plusDovetail_5565:HG4_PB_SVrefine2PBcRDovetail_8991:HG3_PB_SVrefine2PBcRDovetail_8752:HG3_PB_SVrefine2Falcon1Dovetail_11135:HG2_PB_SVrefine2PBcRplusDovetail_5118:HG4_PB_SVrefine2Falcon1Dovetail_11150:HG2_PB_HySA_32584;NumClusterSVs=14;ExactMatchIDs=HG3_PB_assemblyticsfalcon_12340;NumExactMatchSVs=1;ClusterMaxShiftDist=0.175788;ClusterMaxSizeDiff=0.175788;ClusterMaxEditDist=0.219634;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=289;DistBack=-11;DistForward=1216;DistMin=-11;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=19:15045175-15045163;PctSeqSimilarity=0.96;PctSizeSimilarity=0.9263;PctRecOverlap=0.9553;SizeDiff=-23;StartDistance=1;EndDistance=11;GTMatch=0;TruScore=94;MatchId=2556.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:17:./.:17:13:8:1:./.:23:0:0:3:./.:37:5:0/1:16:13:2867:.:.
chr19	15740858	HG3_PB_SVrefine2Falcon1Dovetail_11137	GT	CAATTAGCCAGGGGTTTAGGCCTCTTTTTACCAGCTCCGAGGTGATTTTCATATTGAATTGCAAATTCGAAGAAGCAGCTTCAAACCTGCCGGGGCTTCTCCGCCTTTTTTCCCGGCGGCG	20	PASS	ClusterIDs=HG2_PB_pbsv_17957:HG2_Ill_SVrefine2DISCOVARplusDovetail_5923:HG3_PB_HySA_26992:HG3_PB_assemblyticsfalcon_12348:HG3_PB_SVrefine2Falcon1Dovetail_11137:HG2_10X_SVrefine210Xhap12_12466:HG4_PB_SVrefine2Falcon1Dovetail_11152:HG3_PB_pbsv_17651:HG2_PB_HySA_32593;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11137:HG3_PB_assemblyticsfalcon_12348;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0762712;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.237705;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=119;DistBack=-2;DistForward=-1;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=19:15740860-15740857;PctSeqSimilarity=0.9878;PctSizeSimilarity=0.9917;PctRecOverlap=0.9835;SizeDiff=-1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=2557.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:35:./.:13:15:2:4:./.:0:11:10:1:0/1:32:18:./.:.:.:.:.:.
chr19	16076776	HG3_PB_SVrefine2Falcon1Dovetail_11147	C	CAAAAAAAAAAACAAGAATTAAGAATTAGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGAAGGCGGAGCTTGCAGTGAGCGGAGATCGCGCCACAGCACTCCCGCCTGGGCGACAGAACGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5576:HG2_PB_pbsv_17971:HG4_PB_pbsv_17886:HG3_PB_pbsv_17662:HG3_PB_HySA_27018:HG2_PB_SVrefine2Falcon2Bionano_8812:HG3_PB_SVrefine2PBcRDovetail_8758:HG3_PB_SVrefine2Falcon1Dovetail_11147;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11147:HG3_PB_SVrefine2PBcRDovetail_8758;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0549618;ClusterMaxSizeDiff=0.0519084;ClusterMaxEditDist=0.14826;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=321;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=78;REFWIDENED=19:16076777-16076854;PctSeqSimilarity=0.9927;PctSizeSimilarity=1;PctRecOverlap=0.9408;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=97;MatchId=2558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:32:1|0:1:25:31:2:./.:0:2:12:0:./.:22:3:./.:4:40:.:.:.
chr19	16180348	HG2_Ill_150bpfermikitraw_22154	T	TGGATGACTGTGTGTTTCTGTTAGTGTGTATGTGTGTGACTTTTTATGGGGTTGTATGTGTGTGATTCTATTGAGGTG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_14711:HG4_PB_HySA_26082:HG3_PB_pbsv_17666:HG2_PB_HySA_32624:HG4_Ill_GATKHC_28239:HG4_Ill_GATKHCSBGrefine_12112:HG4_Ill_250bpfermikitraw_23184:HG3_Ill_scalpel_16987:HG3_Ill_manta_3913:HG3_Ill_Spiral_18187:HG3_Ill_Krunchall_23456:HG3_Ill_GATKHC_28143:HG3_Ill_GATKHCSBGrefine_11629:HG3_Ill_250bpfermikitraw_22875:HG3_Ill_150bpfermikitraw_22195:HG2_Ill_manta_4778:HG2_Ill_SpiralSDKrefine_7743:HG2_Ill_Krunchall_23847:HG2_Ill_GATKHCSBGrefine_11731:HG2_Ill_250bpfermikitraw_23526:HG2_Ill_150bpfermikitraw_22154;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22154:HG2_Ill_250bpfermikitraw_23526:HG2_Ill_GATKHCSBGrefine_11731:HG2_Ill_Krunchall_23847:HG2_Ill_SpiralSDKrefine_7743:HG2_Ill_manta_4778:HG3_Ill_150bpfermikitraw_22195:HG3_Ill_250bpfermikitraw_22875:HG3_Ill_GATKHCSBGrefine_11629:HG3_Ill_GATKHC_28143:HG3_Ill_Krunchall_23456:HG3_Ill_Spiral_18187:HG3_Ill_manta_3913:HG3_Ill_scalpel_16987:HG4_Ill_250bpfermikitraw_23184:HG4_Ill_GATKHCSBGrefine_12112:HG4_Ill_GATKHC_28239;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0506329;ClusterMaxSizeDiff=0.0506329;ClusterMaxEditDist=0.0880503;PBcalls=4;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=77;DistBack=-1;DistForward=3489;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=19:16180347-16180349;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2559.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:35:1/1:2:12:2:16:./.:32:418:27:348:1/1:0:11:./.:.:.:.:.:.
chr19	16367201	HG3_PB_SVrefine2PBcRDovetail_8762	T	TCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACGCCCTGCTAGTTTTTTTGTATTTTTAGTAGAGATGGGGTCTCGCCATCTTGATCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACGCACCTCGGCCTCCAAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTAGAGAAAAGGGTGAATCCCCTATCCTGCCTTTTTAAAGACCAGATCTTGACCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCGAGATCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCGGGCATGGTGGTGCATGCCTGTAAGCCCAGCTACTCGGGAGGCTGAGGTAAGATAATCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGGTCGTGCCACTGCACTACAGCCTGGGCAACAGGAGTGAAACTCGGTCTCAAAAAAAAAAAGATCTCATTCTGTTGCTGAGGCTGGAGTGCTGGAGTGCAGTGGCGAGATCATAGCTCACTGTAGCTTCAACCTCCCAGGCTTAAGCGATTCTCCCACCTCAGCCTCCTGAGTAGCTGGGATCGCAGGCACATGTGCCACCACGCCCAGCTAATTTTTTACTTTTTGTAGAGATGGGTTCTCACTTTGTTGTCCAGGCCAGGCTGGTCTCAAACTCCTGTCTTCCAGTGATCCTC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11166:HG3_PB_pbsv_17668:HG4_Ill_Spiral_1384:HG2_PB_pbsv_17977:HG4_PB_HySA_26083:HG4_PB_pbsv_17892:HG4_Ill_MetaSV_2336:HG3_Ill_MetaSV_2413:HG2_Ill_MetaSV_2270:HG2_PB_PB10Xdip_14713:HG2_PB_HySA_32625:HG2_PB_SVrefine2Falcon1plusDovetail_5582:HG4_PB_SVrefine2PBcRDovetail_9002:HG4_Ill_SVrefine2DISCOVARDovetail_12483:HG3_PB_SVrefine2PBcRDovetail_8762:HG3_Ill_SVrefine2DISCOVARDovetail_12688:HG2_PB_SVrefine2PBcRplusDovetail_5134:HG2_PB_SVrefine2PB10Xhap12_13087:HG2_PB_SVrefine2Falcon2Bionano_8815:HG2_Ill_SVrefine2DISCOVARplusDovetail_5937:HG2_10X_SVrefine210Xhap12_12475:HG3_PB_SVrefine2Falcon1Dovetail_11150:HG2_PB_HySA_32626:HG3_PB_HySA_27024;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5937:HG2_PB_SVrefine2Falcon2Bionano_8815:HG2_PB_SVrefine2PB10Xhap12_13087:HG2_PB_SVrefine2PBcRplusDovetail_5134:HG3_Ill_SVrefine2DISCOVARDovetail_12688:HG3_PB_SVrefine2PBcRDovetail_8762:HG4_Ill_SVrefine2DISCOVARDovetail_12483;NumExactMatchSVs=7;ClusterMaxShiftDist=0.36671;ClusterMaxSizeDiff=0.36671;ClusterMaxEditDist=0.374512;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=766;DistBack=16115;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=194;REFWIDENED=19:16367202-16367395;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.9974;PctRecOverlap=0.9311;SizeDiff=-2;StartDistance=-52;EndDistance=-52;GTMatch=0;TruScore=97;MatchId=2560.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:./.:0:4:0:6:./.:0:0:0:0:1/1:0:18:1/1:5:100:.:940:.
chr19	17833069	HG2_PB_SVrefine2PBcRplusDovetail_5137	G	GGGGCAACATGGTGAAACCCTGTCCCTACTGAAAATGCAAAAATGAGCTGGACCTGGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGCCCGAGGAGGGAGGATCGCTTTTACCCAGGAGGCAGAGGCTGCAGTGAGCTAAGATTGTGCCACTGCACTTCAGCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13092:HG2_PB_HySA_32644:HG3_PB_pbsv_17676:HG2_10X_SVrefine210Xhap12_12486:HG3_Ill_250bpfermikitraw_22891:HG2_PB_pbsv_17983:HG3_PB_HySA_27037:HG4_PB_pbsv_17902:HG4_PB_SVrefine2Falcon1Dovetail_11170:HG3_PB_SVrefine2PBcRDovetail_8766:HG3_PB_SVrefine2Falcon1Dovetail_11155:HG3_Ill_SVrefine2DISCOVARDovetail_12700:HG2_PB_SVrefine2PBcRplusDovetail_5137;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5137:HG3_Ill_SVrefine2DISCOVARDovetail_12700:HG3_PB_SVrefine2Falcon1Dovetail_11155:HG3_PB_SVrefine2PBcRDovetail_8766:HG4_PB_SVrefine2Falcon1Dovetail_11170;NumExactMatchSVs=5;ClusterMaxShiftDist=0.131343;ClusterMaxSizeDiff=0.113433;ClusterMaxEditDist=0.27907;PBcalls=10;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=166;DistBack=3690;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6584;REFWIDENED=19:17833070-17823248;PctSeqSimilarity=0.9916;PctSizeSimilarity=1;PctRecOverlap=0.9281;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=97;MatchId=2561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:30:0|1:16:3:2:23:./.:2:0:1:8:0/1:18:8:./.:.:.:.:.:.
chr19	18227577	HG4_Ill_SVrefine2DISCOVARDovetail_12493	C	CTGGGCGTGGTGGTGCAACACCTGTAATCCCAGCTTCTCGGGAGGCTGAGACAGGAGAATCGTTTGAACCCAGGAGGCGGGGGTTGCAGTGAGCCGAGATGGTGCCACTGCACTCCGCCACACTTGGCCTCGCCCAGGCTGGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTGTGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTGGTTTTAAACCAAGGCTGGGAAAAGCCGGATGGAGGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12488:HG3_PB_pbsv_17677:HG2_PB_pbsv_17984:HG4_PB_HySA_26102:HG2_PB_PB10Xdip_14715:HG4_Ill_manta_4068:HG4_Ill_MetaSV_2340:HG4_Ill_GATKHCSBGrefine_12122:HG3_Ill_manta_3917:HG3_Ill_MetaSV_2417:HG3_Ill_GATKHCSBGrefine_11637:HG2_Ill_manta_4781:HG2_Ill_GATKHCSBGrefine_11738:HG2_Ill_MetaSV_2273:HG4_PB_pbsv_17905:HG2_PB_HySA_32647:HG4_PB_SVrefine2Falcon1Dovetail_11172:HG3_PB_SVrefine2Falcon1Dovetail_11157:HG4_PB_SVrefine2PBcRDovetail_9008:HG4_Ill_SVrefine2DISCOVARDovetail_12493:HG3_PB_SVrefine2PBcRDovetail_8767:HG3_Ill_SVrefine2DISCOVARDovetail_12702:HG2_PB_SVrefine2PBcRplusDovetail_5138:HG2_PB_SVrefine2PB10Xhap12_13094:HG2_PB_SVrefine2Falcon2Bionano_8820:HG2_PB_SVrefine2Falcon1plusDovetail_5586:HG2_Ill_SVrefine2DISCOVARplusDovetail_5947;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12488:HG4_PB_SVrefine2PBcRDovetail_9008:HG4_Ill_SVrefine2DISCOVARDovetail_12493:HG3_PB_SVrefine2PBcRDovetail_8767:HG3_Ill_SVrefine2DISCOVARDovetail_12702:HG2_PB_SVrefine2PBcRplusDovetail_5138:HG2_PB_SVrefine2PB10Xhap12_13094:HG2_PB_SVrefine2Falcon2Bionano_8820:HG2_PB_SVrefine2Falcon1plusDovetail_5586:HG2_Ill_SVrefine2DISCOVARplusDovetail_5947;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0763984;ClusterMaxSizeDiff=0.0736699;ClusterMaxEditDist=0.215712;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=355;DistBack=-40;DistForward=0;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=115;REFWIDENED=19:18227578-18227692;PctSeqSimilarity=0.9871;PctSizeSimilarity=0.9944;PctRecOverlap=0.7972;SizeDiff=2;StartDistance=-71;EndDistance=-71;GTMatch=0;TruScore=92;MatchId=2562.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:1/1:0:27:0:25:./.:0:4:0:3:1/1:0:25:1/1:2:52:.:.:.
chr19	18395155	HG2_Ill_SVrefine2DISCOVARplusDovetail_5950	C	CAAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGGGAGCGCACCGGTAATCCCAGCTGCTCTGGAGAAAGGAGAATCACTTGAACCCAGGAGATGGAGGTTGCAGTGAGCTGAAATCATGCCACTACACTCCAGCCTGGGCAACAGGGCAAGACTCCATCTTAAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAGACCTGGCCGTGCGCGATGGCTCACTCCTATAATCCCAGCACTTTGGGAATCCAAAGCGGGTGGATCATGAGGTCAGGAGATCAAGACCATCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATTCAAAAATTAGCTGGGCGTGGTGGCGAATGCCTGTAGTCCCTGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCCGGGAGGCAGAGGCTACAGTGAGCCAAGATTACGCCACTGCACTGCAGCCTGGGCAAAAGAGTAAGAATCCGTCTCAATAATAATAATAATAATAATAATGATAGGCCGGGCGCGGTGGCTCTCGCCTGTAATCCCAGCCCTTTGGGAGGCTGAGGCGGGCGGATCACCTGAGGTCGAGCGTTCGAGACCAGCTTGGCCAGCATGGTGAAACCCCGTCTCCACTACAAATACAAAAATTAGCCAGGTGTGGTGGTGCATGCCTGTAATCCCAGCTACTCAGGAAGCTGAGGCAGAAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGCGCCAGAGGTTGCGGTGAGCCAAGATCGCGCCATTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11174:HG2_PB_pbsv_17986:HG4_PB_pbsv_17906:HG3_PB_SVrefine2Falcon1Dovetail_11158:HG2_PB_PB10Xdip_14721:HG2_PB_assemblyticsPBcR_11959:HG2_PB_SVrefine2PBcRplusDovetail_5140:HG4_PB_HySA_26106:HG3_Ill_MetaSV_2419:HG2_PB_HySA_32651:HG2_PB_SVrefine2Falcon2Bionano_8821:HG2_PB_SVrefine2Falcon1plusDovetail_5589:HG4_PB_SVrefine2PBcRDovetail_9009:HG4_Ill_SVrefine2DISCOVARDovetail_12495:HG2_Ill_SVrefine2DISCOVARplusDovetail_5950:HG2_10X_SVrefine210Xhap12_12493:HG2_PB_SVrefine2PB10Xhap12_13096;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12493:HG2_Ill_SVrefine2DISCOVARplusDovetail_5950:HG4_Ill_SVrefine2DISCOVARDovetail_12495;NumExactMatchSVs=3;ClusterMaxShiftDist=0.190024;ClusterMaxSizeDiff=0.190024;ClusterMaxEditDist=0.245843;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=859;DistBack=4088;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=229;REFWIDENED=19:18395156-18395384;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.9977;PctRecOverlap=0.7979;SizeDiff=-2;StartDistance=-173;EndDistance=-173;GTMatch=0;TruScore=92;MatchId=2563.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:0|1:18:0:0:21:./.:5:0:0:4:./.:15:1:0/1:18:46:.:.:.
chr19	18553252	HG2_PB_SVrefine2PB10Xhap12_13097	A	ACACACCCACCCTCAACACATCCCCAACACACCACACACACCCCACACCACACACCCCAACACACACCACACCCTCATACCACACACCCAGATAACCACATCCACACACCACACCCCAACACACACCCACATCCCAACACATACCACATCCCAACAAACACCACATCCTCACCACACACATCCCAACACACACCACACACCCCACACCCCAACACACACCACACACCCTCACACCTACACACCCACCACACACCTACACAAACCCCACCCCACAATCACACCACACCCACACCCCAACACACACCACACCCACACCAACACCCCAACACACCAAACACCCCAACACACACACCACACACCCACTCCACACCCCAACACACCCCACACCCCCACTGTCACACCACACCCACACCCCAAAACACACCACTGCCCAACACATACACCACACCCACACTTACACACCTACACACCCCAACACACACCACACACACTCCACACCACACGCACCCAACACACCACACACCCACTTACCCCAACACACACCACACCCCAACACACACCACACACCACACGCACCCAACACACACACCTACACCCTCATACCACACACCCAGATACACCACACCGACACCAACACACCACACCCCCACACCACACCCACACCCCAACACACCACACACCCAACACTGCACACCCCAACACACACCACACCCACACCCTCATACCACCCAGATACAGCACACACCCACACCCCAACACACCCAAACCCCAACACACACCACACCCACACCCCACCACATACCACACACACACCCAACACACACCACATACCCAACACCCTAGCACCACTGCATATAATACACCCACACCCTAACACACACCACCACACCCACACCCTCACACGCCCATATACACCACACCCACACCACACCCACCCTAACACACACACGTCCAGATACACCACACCCACACATGAACACACCCACACAAACCCACACCCTAACACACCACACCCCCAGATACACCACACCCACACACCACACATCCACACCCTAACACACACGTCCAGATACACCACCCACACCAACACACCCACACAACACACACCCACACCCTAACACCCCCACAGATAAACCACACACCAACACACAACCCACACCCTAACACCACACCCACACCCCCACAGATACCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5590:HG2_PB_SVrefine2PBcRplusDovetail_5141:HG2_PB_SVrefine2Falcon2Bionano_8822:HG3_PB_SVrefine2PBcRDovetail_8768:HG2_PB_HySA_32655:HG4_PB_pbsv_17908:HG2_Ill_breakscan11_4830:HG3_PB_pbsv_17680:HG2_PB_PB10Xdip_14725:HG4_PB_HySA_26109:HG2_PB_SVrefine2PB10Xhap12_13097:HG3_PB_SVrefine2Falcon1Dovetail_11159:HG4_PB_SVrefine2PBcRDovetail_9010:HG4_PB_SVrefine2Falcon1Dovetail_11175;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13097;NumExactMatchSVs=1;ClusterMaxShiftDist=0.206517;ClusterMaxSizeDiff=0.206517;ClusterMaxEditDist=0.363956;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1191;DistBack=247;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=137;REFWIDENED=19:18553253-18553389;PctSeqSimilarity=0.9024;PctSizeSimilarity=0.827;PctRecOverlap=0.827;SizeDiff=206;StartDistance=-7;EndDistance=-7;GTMatch=1;TruScore=85;MatchId=2564.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:1:14:1:17:./.:183:660:172:640:1/1:0:10:1/1:4:147:.:1435:.
chr19	18800292	HG2_PB_SVrefine2PBcRplusDovetail_5143	G	GTGTAGTAGCACAGTCATGGCTCACTGCAACCTCTGCCTCCCGAGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCACCACACCCTGCTAAGTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGCCTCAGCCTCCCAAAATGCTGAGATTACAGGCGTGAACCACTGTGCCTGGCCTCCATTTATTTCTTAAAATTGGTGGCATGGACAGACGCAGTGGCTCATGCCTGTAACCCCAGCACTTTGGGAGGCCAAGGAGGTGGGCGGATCACCTGAGGTTGGGAGTTCGAGACTAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGATGTGGTGGCGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGAGAATTGCTTGATCCCGGGAGGCGGAGGT	20	PASS	ClusterIDs=HG2_PB_pbsv_17989:HG3_PB_pbsv_17682:HG4_PB_pbsv_17910:HG2_PB_assemblyticsPBcR_11968:HG2_PB_PB10Xdip_14726:HG4_PB_SVrefine2Falcon1Dovetail_11177:HG4_Ill_SVrefine2DISCOVARDovetail_12498:HG4_Ill_MetaSV_2343:HG4_Ill_GATKHCSBGrefine_12125:HG3_PB_SVrefine2PBcRDovetail_8770:HG3_Ill_SVrefine2DISCOVARDovetail_12709:HG3_Ill_MetaSV_2422:HG3_Ill_GATKHCSBGrefine_11641:HG2_PB_SVrefine2PBcRplusDovetail_5143:HG2_PB_SVrefine2PB10Xhap12_13099:HG2_PB_SVrefine2Falcon2Bionano_8824:HG2_PB_SVrefine2Falcon1plusDovetail_5592:HG2_Ill_manta_4783:HG2_Ill_SVrefine2DISCOVARplusDovetail_5953:HG2_Ill_MetaSV_2276:HG2_Ill_GATKHCSBGrefine_11742:HG2_10X_SVrefine210Xhap12_12498:HG3_PB_SVrefine2Falcon1Dovetail_11161:HG4_PB_SVrefine2PBcRDovetail_9012:HG4_PB_HySA_26111;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12498:HG2_Ill_GATKHCSBGrefine_11742:HG2_Ill_MetaSV_2276:HG2_Ill_SVrefine2DISCOVARplusDovetail_5953:HG2_Ill_manta_4783:HG2_PB_SVrefine2Falcon1plusDovetail_5592:HG2_PB_SVrefine2Falcon2Bionano_8824:HG2_PB_SVrefine2PB10Xhap12_13099:HG2_PB_SVrefine2PBcRplusDovetail_5143:HG3_Ill_GATKHCSBGrefine_11641:HG3_Ill_MetaSV_2422:HG3_Ill_SVrefine2DISCOVARDovetail_12709:HG3_PB_SVrefine2PBcRDovetail_8770:HG4_Ill_GATKHCSBGrefine_12125:HG4_Ill_MetaSV_2343:HG4_Ill_SVrefine2DISCOVARDovetail_12498;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0613254;ClusterMaxSizeDiff=0.0593472;ClusterMaxEditDist=0.174419;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=498;DistBack=30529;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=19:18800293-18800298;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:0:22:0:19:./.:0:3:0:6:1/1:0:13:1/1:3:82:.:.:.
chr19	18835612	HG2_PB_pbsv_17990	C	CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTAGACTTTTTTTACATTTATTTCCCTTTCAAAGTTCAGAATACCGCTAATTTCAAAAATGCCAAAAATACTTTTGGCCTGAAAATTTTTTCTTTGAGAATAAAATGCTTTGTTATTTTCTAAAAATTACCTTATTACCATTTAATTAATAATGAAAAACATTAAAAAACCTATTAACAAGTTTCATAGCAAGTCCATATTTTTCTTTCAAAACTGTAGCCCAATTTATTTTTGAAGTTGCCAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTAAACTAGGTTCAAATTCTTTATTTTCTGTTTTTTTGTTTTTTTTTTAATTTTTTATTTTATGATCATTTTTCTTGGGGGTTTTCTCGCAGAGGGGATTTGGCCAGGGTCACTAGAACATAGTGGAGGGAAGCGTCAGCAGAAGTTAAAACAAGTGAAAACAAAGGGTCCTGGTTCCTAGGCAGAGGGACCTGCGGCCTTCCGCAGTGTTGGTGTCCCTGGGTTACGTAAAAGATTTAGGGAGTGGTGATTTGGACTCTTAACGAGCATCGCTTTCAAGATCTGTTTAACAAAGCAACCATTCTTTGCACCGCCCTTAATCCATTTTTAACCCTGAGTGGGACCACAAGCACATTTTCAAGAGCCCACAGTGGTGGGGGATTATGTCACAGATCAACAGGGATCCCAAGGCAAGAAGAATTTTCTTTAGACAGAACAAAAGATAAAAGCTTCCCATGGTCTACTTTCTATCCACACAGACCGTGCAAACCAATCCGATTTCGTCAAAATTTTTCCCCACCCCTTTCCCGGCCTTTCCTCCATTCCACAAAACCGCCATTCCAGTTTCATCATGGCCCATCCCCATAGCCCGCTGGGCACACCTCCCCCAGACGGGCGTGGCCGGGCAGAGGGCTTCCTTCACTTCTCCAGTAGGGGCGCCCGGCAGAAAGTTGCCCCTTCACCTCACAGATGGGCGGCTGGCCGGCGGTGGCTTGACCCCCCCCTCCGCCCTTTCCCGAGACGGGGGCGGGCTGGCCAGCAGAGGGCTCCTCACTTCCCAGGTAGGCGGCCAGGCAAAGTAGGCGCCCCTCAACCTCCGGATAAGGCGGCTGGCCGGCGGGGGCTGTTCCCCCCACCTCCCTTCGGACGGGCGCTGGCCGCGGCAGAGGGGTTTTCTTCCTCACTTATTCCCAGTAGGGGCGGGCCGGCAGAGGCGCCCCTTCAACCTTTCCCGGACGGCGGCTGGCCAGCAGGGCTGATCCCCCACCTCCCTCCCGACGGGGCAGCTGGCCGGGCGGGGCTGACCCCCCCCCCTCACCTCCCGACGGGGCGGCGGCGGCAGAGGGTCCTCACTTTTCCCAGTAGGGGGCGGCCGGCCAGAGGCGCCCTCACCTCCCGGACGGGGCGGCTGACCAAGGCAGGGGCTGGATCCCCCACCTCCCTCCCGGACGCGGGCGGGCCGGGCGCGGGGGCTTTAGACCCCCCCACCTCCTCCCGAGCGGGCGGCTGGCCGGCAGGGGCTGACCTCCCCCCCCCCTCCCGGACGGGCGGCTGCCGGGCGGGGGCTGAACCCCCCCACCTCCCTTCCCGGGATGGGGCGGCTGGCCAGGCGGGGGGCTGAACCCCCCACCTCCCTCCTTGGGGGCGGGCGGCTCGAGCCCGGCCAGAAGGGCCATCCTCACTTCCCAGTAGGGGCGGGCCGGGCAGAGCGCCCCTCACCTCCCGGGACCGGGGCGGCTGCCACGGGGGGCTGACCCCCCCACCTCCCTCCTGGACTGGAGCGGCTGGCCGGGCGGGTTGACCCCCCCACCTCCCCTCCGACGGGCGACTGGCCGGGCAGAGGGGGCTCCTCCACTTCCCAGTAAGGGCGGCCGGGGCAGAGGAAGCCCCTTCCCACCTCCGCCGGGGCGCTGGGCCGACCCCCCCCCGCCTCCCTTCCCGGACGGGCGGCTGGCCGAGGCAGAGGCTCACTTCACTTCCCATAGGGCGGCCGCAAGAGGGAGCCCCTTTCACCTCCCCGGAGGCGGCTGGCCGGGGCGGGGGGCTTTGAGCCCCCCCCCACCTCCTTCCCGACGGCCGTGGCTGCCGGGGCGGAGACGGGCTCCCATCCCAGACGGGTGGTTACCAGGGACGAGGGGCTCTCACTTTCTTCAGACGGGGCGGGTTTTTGCCAGGCAGAGGTTTCCCTCTACTTCTTCAAGACGGAGCGGCCGGCAGAGAGACACTTTCCTCACCTTCCCAGACAGGTGCGGCCCCAGAGGCGCTCCTCCACATCCCAGGGAACAGGGCGGTGGGGGGGCAGAAGGTGCTCCCACAGTTTCAGACATGGCGGGCCGGGCAAGAGACGCTCCTCACTTCCTAGATGGGATTGGCGCGGGAAGAGGCGCTTTTCTCACTTTCCCTAGATGGGATGGCGGCCGGCAGAGACGCTCCTCACTTTCACACTGGGCAGCCAGGCAGAGGGGCTCCGCATAGTCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCCTCACTTCCCAGACGGGGTGGCGCCGGGCAAGAGGCTGCCAATCTCGGCTCTTTGGCGAGGCCAAGGCAGCAGCTGGGAGGGTTGGTTGTTAAGCGAAGCCGATGATCACGCCCACTGCACTCCAGCCTGGGGCAACATTGAGCACTTGAGTGAACGAGACATCCGTCTGCAATTCCCGGCACCTCAGGCAGGCCGAGGCTGGCGGATCACTTCGCGGTAGCGAGCTGCGAGACCAGCCCGGCCAGACAACAGCGAACCCCATTCTCCACCAAAAAAAATAAACGAAACCAGTCCAGCGTGGGTGTGTCGGCCGCCGCGCCTGCAATCGCAGGCACTCGCAGCTGAGCAGAGGAATTCAGCAGGGAGGTCGCAGTGAAAGCGAAGATTGGCAGCAAGCACAGTCCAGCTTGGCCTCGGCTATGAGAGGACGAGAGGCGAGACGGAGAGGGAAGAGGAGACGGGAAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAAGAGACTGTTTTTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5144:HG4_PB_pbsv_17911:HG2_PB_pbsv_17990:HG2_PB_PB10Xdip_14727:HG2_PB_HySA_32660:HG4_PB_HySA_26112:HG2_PB_SVrefine2PB10Xhap12_13100;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_17990;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0559299;ClusterMaxSizeDiff=0.0552561;ClusterMaxEditDist=0.196072;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=3049;DistBack=0;DistForward=4026;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=19:18835613-18835612;PctSeqSimilarity=0.9271;PctSizeSimilarity=0.9567;PctRecOverlap=0.9567;SizeDiff=132;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=94;MatchId=2566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:43:0|1:14:2:0:27:./.:0:3:14:0:0/1:29:11:0/1:96:54:.:3094:.
chr19	19227229	HG2_PB_SVrefine2PBcRplusDovetail_5145	C	CGGGTGCGGTGGCTCATGTCTTTAATCTCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACTTGAGGTCAAGGGTTCGAGACAGCCTGGCCAATATGGTGAAACCCCGTCTGTACTAAAAATACAAAAATTAGCCGAGAATAGTGCTGGGCGCCTGTAATCCCAGCTACTCGAGAGGGTGAGACAGGAGAGTCTCTTGAACTTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAACAAACAAAAACATAGGTATCTTACCTGGTTGGTTGGCTGGTTTTTGTTTGTTTGTTTGTTTTTTGTTTTGTTTTGTTTTTTGAGACGGAGTTTCGCTCTTGCTGCCCAGGCTGGAGTGCAATGGTGCAATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGGTGGGATCACAGGGCATGTACCACTATGCCTGGCTAATTTTGTATTTTTAGTAGAGACGGAGTTTCTCCATTTTGGTCAGCCTGGTCTCGAACTCTCGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCTGGCCTAGTTGACTGTTTTTTTTCCTCCAGTCTAGCTTAGAGCTCTTTCAAGAATAGCTCATTTGCAGGCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11162:HG4_PB_pbsv_17913:HG2_PB_pbsv_17992:HG3_PB_HySA_27047:HG3_PB_pbsv_17684:HG2_PB_PB10Xdip_14728:HG4_Ill_MetaSV_2344:HG4_Ill_GATKHCSBGrefine_12126:HG2_Ill_MetaSV_2277:HG2_Ill_GATKHCSBGrefine_11745:HG3_Ill_MetaSV_2423:HG4_PB_HySA_26115:HG4_PB_SVrefine2Falcon1Dovetail_11179:HG4_PB_SVrefine2PBcRDovetail_9015:HG4_Ill_SVrefine2DISCOVARDovetail_12500:HG2_PB_SVrefine2PBcRplusDovetail_5145:HG2_PB_SVrefine2PB10Xhap12_13101:HG2_PB_SVrefine2Falcon2Bionano_8826:HG2_Ill_SVrefine2DISCOVARplusDovetail_5955:HG2_10X_SVrefine210Xhap12_12501:HG3_Ill_SVrefine2DISCOVARDovetail_12710:HG2_PB_SVrefine2Falcon1plusDovetail_5594:HG3_PB_SVrefine2PBcRDovetail_8772;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12501:HG2_Ill_SVrefine2DISCOVARplusDovetail_5955:HG2_PB_SVrefine2Falcon2Bionano_8826:HG2_PB_SVrefine2PB10Xhap12_13101:HG2_PB_SVrefine2PBcRplusDovetail_5145:HG4_Ill_SVrefine2DISCOVARDovetail_12500:HG4_PB_SVrefine2PBcRDovetail_9015;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0566038;ClusterMaxSizeDiff=0.0539084;ClusterMaxEditDist=0.236545;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=722;DistBack=51988;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=124;REFWIDENED=19:19227230-19227353;PctSeqSimilarity=0.996;PctSizeSimilarity=1;PctRecOverlap=0.9627;SizeDiff=0;StartDistance=-27;EndDistance=-27;GTMatch=0;TruScore=98;MatchId=2567.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:0:5:0:17:1/1:0:17:0:12:1/1:0:33:1/1:4:115:.:.:.
chr19	19321811	HG4_Ill_MetaSV_2346	C	CGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGACCAATCGTTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACTCCATCTCCACTAAAAATACAAAAATTAGTCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGACAGGAGAATCGCTTGAACCATGGGGGCAGAGGTTTCAGTGAGCCTAGATTGCACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCTGTCTCAAAAGAATAAATAAATAAGTAAAATAAAGTGTACAATTCAATGGCGTTAAGTACATTCACGTTATTGTGCAACCGTCACCTCTGTCTAGGTCCAGAATATTTTCGTCACCCTAAAAGAAGACCTGGTCCTCATCAGCAGTCACTCCCCATTTCCCCTCCCCCAGCCCCAACATCCACTAATCTGCCTCCTGTCTCTGTGGATTTGCCTGATCTGAGAATTTCTTTTCTTTTCTTTCCTTTTTTTTTTTCTTTTTTGAGACAGAGTCTTGTCACTCAGCCTGGAGTGCAGTAGTGCAAATATGCCTCACTGCAGCTTCGACCTCCTAGGCTCAAGAGATCTTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACACACCACCATGCCCGGATATATATATATATTTTTTGTGTGTGTGTATGTGGAGACAAAGGGGTCTTACTTTGTTGCCCAGGCTAGTCTCGAACTCCTGGCCTCAAGGGAGCCTCCCACCATAGCCTCCCAAAGTGCTGGGATCACAGGCGTGAGCCACCGCGCCCAGCCTTGGATCTAGGCTTTAAAGATTGGGGTCTCCAGGCTGGGTGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5596:HG4_PB_pbsv_17915:HG3_PB_pbsv_17686:HG2_PB_pbsv_17994:HG4_PB_HySA_26117:HG2_PB_PB10Xdip_14729:HG2_Ill_MetaSV_2279:HG2_PB_SVrefine2Falcon2Bionano_8828:HG4_PB_SVrefine2PBcRDovetail_9017:HG4_Ill_SVrefine2DISCOVARDovetail_12502:HG4_Ill_MetaSV_2346:HG3_PB_SVrefine2PBcRDovetail_8773:HG3_PB_SVrefine2Falcon1Dovetail_11164:HG3_Ill_SVrefine2DISCOVARDovetail_12711:HG3_Ill_GATKHCSBGrefine_11644:HG2_Ill_SVrefine2DISCOVARplusDovetail_5957:HG2_10X_SVrefine210Xhap12_12505:HG2_PB_SVrefine2PBcRplusDovetail_5147:HG2_PB_SVrefine2PB10Xhap12_13103:HG4_Ill_GATKHCSBGrefine_12128:HG2_Ill_GATKHCSBGrefine_11747:HG4_PB_SVrefine2Falcon1Dovetail_11181;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12505:HG2_Ill_SVrefine2DISCOVARplusDovetail_5957:HG3_Ill_GATKHCSBGrefine_11644:HG3_Ill_SVrefine2DISCOVARDovetail_12711:HG3_PB_SVrefine2Falcon1Dovetail_11164:HG3_PB_SVrefine2PBcRDovetail_8773:HG4_Ill_MetaSV_2346:HG4_Ill_SVrefine2DISCOVARDovetail_12502:HG4_PB_SVrefine2PBcRDovetail_9017;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0465645;ClusterMaxSizeDiff=0.044293;ClusterMaxEditDist=0.176962;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=862;DistBack=3330;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=287;REFWIDENED=19:19321812-19322098;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:7:0:16:1/1:0:12:0:17:1/1:0:12:./.:9:113:.:.:.
chr19	19454352	HG3_PB_pbsv_17687	T	TTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAAAGTCTCGCTCTGTCGCCAGCCGCTGGAGTGCAGTGGCGGATCTCGCGACTCACTGCAAGCTCCGCCTTCCCGGGTTCACTGCCATTCCTGCTCAAGCCTCCCAAGTAGCTGGACTTTAACAGCGGCCCCGCCACTACCGGGCCTAATTTTTTGTATTTTTAGGTAGAGACGAGGTTTCACCGTTTAGCGGGATTTCGGGTCTCGATCTCCTGACTCGTGATCCGCCGCCTCGGCTCCCAAAGCTGCTGGGATTACAGGCGTGAAGCCACCGCGCCCGGCCCACATTTCTACA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4831:HG2_PB_pbsv_17996:HG3_PB_pbsv_17687:HG2_PB_SVrefine2Falcon2Bionano_8829:HG2_PB_SVrefine2Falcon1plusDovetail_5597;NumClusterSVs=5;ExactMatchIDs=HG3_PB_pbsv_17687;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0334262;ClusterMaxSizeDiff=0.0278552;ClusterMaxEditDist=0.192837;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=363;DistBack=-4;DistForward=4354;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=19:19454339-19454354;PctSeqSimilarity=0.9454;PctSizeSimilarity=0.9862;PctRecOverlap=0.9559;SizeDiff=5;StartDistance=14;EndDistance=14;GTMatch=0;TruScore=96;MatchId=2569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:25:1|0:1:18:22:2:./.:25:0:0:4:0/1:23:7:0/1:10:14:.:.:.
chr19	20248693	HG4_Ill_GATKHCSBGrefine_12131	C	CGCCGCCCCGTCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGTGACCCCGTCTGGGAGGTGAGGAGCATCTCTGCCCG	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_11754:HG2_PB_pbsv_18003:HG4_PB_pbsv_17923:HG4_Ill_GATKHCSBGrefine_12131:HG4_Ill_250bpfermikitraw_23222:HG4_Ill_150bpfermikitraw_22333;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11754:HG4_Ill_GATKHCSBGrefine_12131:HG4_Ill_250bpfermikitraw_23222:HG4_Ill_150bpfermikitraw_22333;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0864198;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.197531;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=77;DistBack=0;DistForward=2;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=13;REFWIDENED=19:20248692-20248707;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:29:0|1:33:6:5:23:./.:1:1:14:0:0/1:14:5:./.:.:.:.:1690:.
chr19	20255931	HG2_PB_HySA_32673	G	GTGGGATTACAGGCGTGAGCCACCACGCCCGGCCGTTTCTCCTTTTTGTTATTAAAAAAAAATCAGCTGAATTTGTCTTCAGTGGTCGAAATAAAAGATTTTATTTTTTATTTTTTTTTATTTTTATTTTTTTTATGATGGAGCCTCACTCTGTCGCCCAGGTTGGAGTGCAGTGGCGTGATTGCGGCTTACTGCAACCTCCGCCTCCCAGGTACAAGTAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGAGCCCAAAACCACAGCCGGCTTTTTGTTTTTCTGGGCTTTTTTCTGAGACAGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCAATCTCAGCTCACCGCCAACCTCCACCTCACCCCTGCCTCAGCCTCCCAAGTACCTGGGATTACAGGCATGCACCACCACGCCTGGCTAATTTTTTGTTTTTTTTTTTTTTAGTATAGATGGGGTTTCTCCATGTTGGTTAGGCTGGTCTCGAACTCCCGACCTCAGGTGATCCTCCCGCCTCAGGTGATCCTCCCGCCTCAGGCTCCCAATAATTTTTGTATTTTTAATAGATACAGGGTTTCACCATGTTGACCAGGCTGGTCTCAAACTTCTGACGTCAGATGATCTGCCTGCCTTGGCCTCTCAAAGTGCTGAGATTACAGGCATGAGCCACCAGCCTGGCTTAAAATTAAATATTTTTAAATTAAACTTTACTTAAGTTTATCTCCCTGCTCAAGCTCCTGAACTTTGAGCTACCCTCAGTCTGAGTCAACATACAATCCCATTTTACGTCCCTCATAAAGAACATGCTGATTTTCAGGGTAAGACATCCTCTGATCTAAAATCTGACTTTTTCACCCTCCATTTGCCATTCCCTTCCCACCTCGTTTCTAGTCTTGTTTGCTCCTTTTCTCGGAAAGAAAGGTCTTTTTATGCCTACATCTTTGCAAGCCATAAAGATCTTATAGTTAGTTGGTATTTCCTCTTATTGCAATACTTTTTTTGGAATTCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCTTTCTGTTGCCCAGGCTGGAGTGTAGTGGCGCGATCTTGGCTCACTGCAAGCTCCGCCTCCGGTGTTCATGCCATTCTCCTGCCTCAGCTTCCTGAGTAGCTGGGACTACAGGCACCCGCCACCACGCCCAGCTAAATTTTGTATTTTCTTTAGTAAGAGACGGGGTTTCACCGTGTTAAGCCAGGATGGTCTCGATCTGCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13111:HG2_PB_HySA_32673:HG2_PB_PB10Xdip_14738:HG4_PB_HySA_26126:HG4_PB_pbsv_17924:HG4_PB_HySA_26125:HG2_PB_SVrefine2PBcRplusDovetail_5152:HG3_PB_SVrefine2Falcon1Dovetail_11169:HG4_PB_SVrefine2Falcon1Dovetail_11184:HG2_PB_HySA_32672:HG4_PB_SVrefine2PBcRDovetail_9021;NumClusterSVs=11;ExactMatchIDs=HG2_PB_HySA_32673;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0535988;ClusterMaxSizeDiff=0.0520674;ClusterMaxEditDist=0.132926;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=1315;DistBack=7233;DistForward=27;DistMin=27;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=297;REFWIDENED=19:20255662-20255958;PctSeqSimilarity=0.993;PctSizeSimilarity=0.9909;PctRecOverlap=0.965;SizeDiff=12;StartDistance=40;EndDistance=40;GTMatch=0;TruScore=98;MatchId=2572.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:34:0|1:34:0:0:28:./.:2:6:26:0:0/1:34:8:0/1:39:75:.:1690:.
chr19	23751079	HG2_PB_SVrefine2PBcRplusDovetail_5173	A	AGCCTCTGCCCAGCCGCCACCCCGTCTGGGAAGTGGGGAGCGTCTCTGACTGGCTGCCCATTGTCTGGGATGTGGGGAGTCCCTCTGCCCGGCCACACCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCGTCTGGGATGTGAGGAGCACCTCTGCCCGGCCGCCCCATCTGGGAGGTGAGGAGCACCTCTGCCCAGCCGCCATGCCGTCTGGGAGGTGAGGAGCATCTCTGCCCAGCCGCCACCCCGTCTGGGATGTGAGGAGCACCTCTGCTCGACCGCCACCCCATCTGGGATGTAAGAAGCGCCTCTGCCCAGCCGCCACCCCATCTGGGATGTGAGGAGCGCCTCTGGCCAGCCGCCCCGTCTGGGAGGTGAGCAGCGCCTCTGCCTGGCCGACCCATCTGGGAGGTGAGGAGCGCCTCTGCCTGGCCGCCCCGTCTGGGAGGTGAGGAGCGCCTCTGCCTGGCCGCCTCGTCTGGGAGGTGAGGAGCGCCTCTGCCTGGCTGCCCATCATCTGGGATGTGAGGAGCACCTCTGCCCAGCCGCCACCCTGTCTGGGAGGTAAGGAGC	20	PASS	ClusterIDs=HG4_PB_HySA_26167:HG2_PB_pbsv_18037:HG2_PB_HySA_32709:HG3_PB_pbsv_17726:HG4_PB_pbsv_17963:HG2_PB_PB10Xdip_14805:HG3_PB_HySA_27090:HG2_PB_SVrefine2Falcon1plusDovetail_5620:HG4_PB_SVrefine2PBcRDovetail_9041:HG4_Ill_SVrefine2DISCOVARDovetail_12532:HG3_Ill_SVrefine2DISCOVARDovetail_12743:HG3_Ill_MetaSV_2439:HG2_PB_SVrefine2PBcRplusDovetail_5173:HG2_PB_SVrefine2PB10Xhap12_13139:HG2_PB_SVrefine2Falcon2Bionano_8849:HG2_Ill_SVrefine2DISCOVARplusDovetail_5987:HG2_Ill_MetaSV_2291:HG4_Ill_MetaSV_2365:HG4_PB_SVrefine2Falcon1Dovetail_11208:HG2_Ill_breakscan11_4836;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5987:HG2_PB_SVrefine2Falcon2Bionano_8849:HG2_PB_SVrefine2PB10Xhap12_13139:HG2_PB_SVrefine2PBcRplusDovetail_5173:HG3_Ill_MetaSV_2439:HG3_Ill_SVrefine2DISCOVARDovetail_12743:HG4_Ill_SVrefine2DISCOVARDovetail_12532:HG4_PB_SVrefine2PBcRDovetail_9041;NumExactMatchSVs=8;ClusterMaxShiftDist=0.112676;ClusterMaxSizeDiff=0.106924;ClusterMaxEditDist=0.285714;PBcalls=13;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=576;DistBack=9186;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=182;REFWIDENED=19:23751080-23751261;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2573.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:0:19:0:15:./.:0:3:1:2:./.:1:18:1/1:2:78:.:.:.
chr19	23917052	HG3_PB_SVrefine2Falcon1Dovetail_11191	A	ACTTATTGACTTGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_32713:HG2_PB_pbsv_18040:HG3_PB_pbsv_17730:HG4_PB_pbsv_17966:HG4_PB_assemblyticsfalcon_12269:HG2_PB_PB10Xdip_14807:HG2_Ill_breakscan11_4837:HG3_PB_HySA_27094:HG2_10X_SVrefine210Xhap12_12533:HG4_PB_SVrefine2PBcRDovetail_9043:HG4_PB_SVrefine2Falcon1Dovetail_11209:HG4_Ill_GATKHCSBGrefine_12173:HG3_PB_SVrefine2PBcRDovetail_8796:HG3_PB_SVrefine2Falcon1Dovetail_11191:HG2_PB_SVrefine2PBcRplusDovetail_5175:HG2_PB_SVrefine2PB10Xhap12_13141:HG2_PB_SVrefine2Falcon2Bionano_8851:HG2_PB_SVrefine2Falcon1plusDovetail_5622:HG3_Ill_MetaSV_2440:HG3_Ill_GATKHCSBGrefine_11668:HG2_Ill_MetaSV_2292:HG2_Ill_GATKHCSBGrefine_11781:HG4_PB_HySA_26175;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5622:HG2_PB_SVrefine2Falcon2Bionano_8851:HG2_PB_SVrefine2PB10Xhap12_13141:HG2_PB_SVrefine2PBcRplusDovetail_5175:HG3_PB_SVrefine2Falcon1Dovetail_11191:HG3_PB_SVrefine2PBcRDovetail_8796;NumExactMatchSVs=6;ClusterMaxShiftDist=0.171779;ClusterMaxSizeDiff=0.171779;ClusterMaxEditDist=0.190184;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=314;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=19:23917053-23917065;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2574.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:1:23:0:18:1/1:0:7:0:8:./.:0:2:1/1:2:53:.:.:.
chr19	23935919	HG4_Ill_SVrefine2DISCOVARDovetail_12534	A	AGCCAGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCATCTGAGGTCAAAAGTTCAAGACCAGCCTGGCCAACATACTGAAACCCCATCTATACTAAAAATACAAAAATTAGCCAGGCATGGGTGGCATGTGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGATAATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGCACCAGTGCACTCCAGCCTGGGCAACAGAGCAAGACTCTGTCTCAAAAAAAAATCTTATTTACGATAGCATTAAAATAAATTTCTGAGAAGAAATTTAATCAAAGAGGTAGAAAATCTTTACAATGAAAGATATATCAATGAGAGAAATTAGAAAAGACACAAATAAATTTAAAAATATTTCATGTCTATAGATTGAAAGAATAAATACTGTTAAAGTGCCATGTTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11192:HG3_PB_pbsv_17732:HG4_PB_pbsv_17968:HG2_PB_PB10Xdip_14808:HG3_PB_pbsv_17731:HG2_Ill_SVrefine2DISCOVARplusDovetail_5990:HG4_Ill_MetaSV_2366:HG3_Ill_MetaSV_2443:HG3_PB_HySA_27095:HG2_PB_HySA_32714:HG2_10X_SVrefine210Xhap12_12534:HG4_PB_SVrefine2PBcRDovetail_9044:HG4_PB_SVrefine2Falcon1Dovetail_11210:HG4_Ill_SVrefine2DISCOVARDovetail_12534:HG3_PB_SVrefine2PBcRDovetail_8797:HG3_Ill_SVrefine2DISCOVARDovetail_12745:HG2_PB_SVrefine2PBcRplusDovetail_5176:HG2_PB_SVrefine2PB10Xhap12_13142:HG2_PB_SVrefine2Falcon2Bionano_8852:HG2_PB_SVrefine2Falcon1plusDovetail_5623:HG2_Ill_SVrefine2DISCOVARplusDovetail_5989;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5989:HG2_PB_SVrefine2Falcon1plusDovetail_5623:HG2_PB_SVrefine2Falcon2Bionano_8852:HG2_PB_SVrefine2PB10Xhap12_13142:HG2_PB_SVrefine2PBcRplusDovetail_5176:HG3_Ill_SVrefine2DISCOVARDovetail_12745:HG3_PB_SVrefine2PBcRDovetail_8797:HG4_Ill_SVrefine2DISCOVARDovetail_12534:HG4_PB_SVrefine2Falcon1Dovetail_11210:HG4_PB_SVrefine2PBcRDovetail_9044;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0381356;ClusterMaxSizeDiff=0.0297872;ClusterMaxEditDist=0.27957;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=465;DistBack=538;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=752;REFWIDENED=19:23935920-23936671;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2575.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:83:1/1:0:22:2:16:1/1:1:39:0:39:1/1:0:73:./.:4:28:.:.:.
chr19	23951407	HG2_PB_SVrefine2PB10Xhap12_13144	T	TGAGAAAGAGTCTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCCGGCTAAAACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11212:HG3_PB_pbsv_17733:HG4_PB_pbsv_17970:HG2_PB_pbsv_18043:HG3_PB_HySA_27097:HG4_PB_assemblyticsfalcon_12272:HG3_Ill_MetaSV_2444:HG4_Ill_GATKHCSBGrefine_12174:HG3_Ill_GATKHCSBGrefine_11669:HG2_PB_HySA_32717:HG3_PB_SVrefine2Falcon1Dovetail_11193:HG3_PB_SVrefine2PBcRDovetail_8798:HG4_PB_SVrefine2PBcRDovetail_9046:HG2_PB_SVrefine2PB10Xhap12_13144:HG2_PB_SVrefine2Falcon2Bionano_8854:HG2_PB_PB10Xdip_14810:HG2_PB_SVrefine2PBcRplusDovetail_5177:HG2_PB_SVrefine2Falcon1plusDovetail_5624;NumClusterSVs=18;ExactMatchIDs=HG2_PB_PB10Xdip_14810:HG2_PB_SVrefine2Falcon2Bionano_8854:HG2_PB_SVrefine2PB10Xhap12_13144:HG4_PB_SVrefine2PBcRDovetail_9046;NumExactMatchSVs=4;ClusterMaxShiftDist=0.107362;ClusterMaxSizeDiff=0.104294;ClusterMaxEditDist=0.182362;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=414;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=19:23951408-23951420;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9969;PctRecOverlap=0.9939;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:64:1/1:1:25:2:10:./.:0:7:0:4:./.:0:4:./.:3:48:.:.:.
chr19	24011285	HG2_PB_SVrefine2PB10Xhap12_13146	T	TAAGTATTTCAACCTTAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCGTTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCCCCCAAAGTGCCGAGATTGCAGCCTCTGCCCAGCTGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCCCCCATCGTCTGGGATATGAGGAGCCTCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTATCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAACCCTGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGGGGGGGTCGGCCAGCTGCCCTGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCTGCCCCATCCAGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCAGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGAGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTACTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_26180:HG3_PB_pbsv_17735:HG4_PB_pbsv_17972:HG3_PB_assemblyticsfalcon_12470:HG2_PB_pbsv_18045:HG3_PB_HySA_27101:HG3_PB_SVrefine2PBcRDovetail_8800:HG4_PB_assemblyticsfalcon_12275:HG2_PB_PB10Xdip_14812:HG2_Ill_breakscan11_4838:HG2_PB_SVrefine2Falcon2Bionano_8856:HG2_PB_SVrefine2PBcRplusDovetail_5179:HG2_PB_SVrefine2PB10Xhap12_13146:HG4_PB_SVrefine2PBcRDovetail_9048:HG2_PB_SVrefine2Falcon1plusDovetail_5626:HG3_PB_SVrefine2Falcon1Dovetail_11195:HG4_PB_SVrefine2Falcon1Dovetail_11214:HG3_PB_HySA_27100:HG2_PB_HySA_32720;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13146:HG2_PB_SVrefine2PBcRplusDovetail_5179;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0754119;ClusterMaxSizeDiff=0.0754119;ClusterMaxEditDist=0.173317;PBcalls=18;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1553;DistBack=3906;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=19:24011286-24011300;PctSeqSimilarity=0.9981;PctSizeSimilarity=0.9968;PctRecOverlap=0.9962;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2577.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:1/1:0:24:0:21:1/1:0:9:0:7:1/1:0:20:1/1:14:326:.:5110:.
chr19	24027921	HG2_PB_SVrefine2PBcRplusDovetail_5180	T	TCATTTCTGATTTTTTTTTATTTTTATTTTTTTTAATTTTTTATTATTTTATTTTTCTTTTAATTGGCACAACATCTGGCAAGCATTGATTATGAAATTAACTTCCAAAATAGTAGTGGGAGTTGCACTGTCTTTTGGCAGGGTAATGAGAGTTTCCATCGCTCTGTATCCTCTCCAGTACTTGGAACTGCCAGACTTGAATTTCTTCTATTCAGGTGGGTGGTGATTGTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTAATTTTTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCCATCCACACAGACCCGGCAACCATCCGATTTCTCAATTTCTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGTGCTCCCCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGCTGATCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGCAGGGAGCTGACCCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGCTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACAGGGTTGCGGCCCAGCAGAGGCACTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCAGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTCCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCGAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCTGGGCAGAGGCTGCAATCTCGGCACTTTGGGGGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCGAGCCGAGATCACGCCACTGCATTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCGCCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGTTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCATGGAAGGAGACCGTGGAGAGGGGAGAGGGAGAGGGAGAGGGAGAGGGA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4839:HG2_PB_pbsv_18046:HG4_PB_pbsv_17973:HG4_PB_assemblyticsfalcon_12276:HG3_PB_pbsv_17736:HG3_PB_assemblyticsfalcon_12471:HG2_PB_HySA_32721:HG2_PB_SVrefine2Falcon2Bionano_8857:HG4_PB_SVrefine2PBcRDovetail_9049:HG4_PB_SVrefine2Falcon1Dovetail_11215:HG3_PB_SVrefine2Falcon1Dovetail_11196:HG3_PB_SVrefine2PBcRDovetail_8801:HG2_PB_SVrefine2PBcRplusDovetail_5180:HG2_PB_SVrefine2PB10Xhap12_13147:HG2_PB_SVrefine2Falcon1plusDovetail_5627:HG2_PB_PB10Xdip_14813:HG4_PB_HySA_26181;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5180;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0655271;ClusterMaxSizeDiff=0.0655271;ClusterMaxEditDist=0.224421;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=2436;DistBack=16620;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=19:24027922-24027942;PctSeqSimilarity=0.9994;PctSizeSimilarity=0.9996;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=2578.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:1:17:0:15:./.:0:2:0:7:1/1:0:25:1/1:11:364:.:5110:.
chr19	24033177	HG2_Ill_SVrefine2DISCOVARplusDovetail_5992	T	TTATTTTTTTTTTTTTTAACAAAGAAGTATTTTATTATTTTGCTGCAAAGCTGTTGCTTCACTGTATAAAAATAGCACCAGCAAATGCAGTGTATCGCAAAATTAAAATAGTGGTGTTCCTCATCTGACACTGTACAAGCAACAAAACCTCTTCACTTCCAGTTATTTCCAATGGAAAGATCATTAAGTATTTCATCCCAAATCCAGGTATGGATACATGCAAGTTACAATATTATATAAGGCTTAAGAATAACAATGTTATCTTTGAATTATGTAATTTTTATAACTAGTTTTTACCATGGATAATTTCATGAATTCTGAACACTAGAGCCTAGTCTAAAAATCATAGGATATTGTGAAAAAGATGCATATTATATTTATCTATAATCATTAGAAAGTTAAAGGCATTTTCTTTCATTAGCAGTGTTAACAGTAGTTTTTTTCCCCCATCGGTAATATTAAAAGTTTCTATTCTAAGTCTTCTATCCACCACTAATTTAAGACAACTCTGCTGGCTTGCGTTATTTCATACTAGTTTATTTAGGAGTTCCATTTTCACTCCTCAATAGATTTTATGTATTTCTCATATGCTTCTTCACTCATAAGTTCATCTAGTTCTGAAGGGTTACTCAGTGTCATCTTGATCAGCCAACCATCTTCACAACAAGATTTGTTTACGAGTCCTGGATTTTCTGCAAGAGCTTCATTAATTTCAGTTACTTCTCCTGATAAAGGAGAATAGAGTTCACTAGCAGCTTTCACACTTTCCAAAGCACCAAACTCATCTTGTTTGTTCAATTTTGTCCCAACTTCAGGCAGACTACAGTAAACAACATCTCCCAACGCTTCCTGTGCAAAATTGCTGATTCCCACTGTTCCAATGCCATTTTCTGTTGTTACCCATTCGTGTTTCTCTGTGAATTTACGCACCGAGAGCAGAGCGGGTCCAGTGCGCAGCGTACGGACGGCGCCCACCCCCAGCTGCCAGGGCCTCGGCGGGCAGGGCGCGGCGGGTGACGGGACCGCGCGCAGGGTGCAGAGCAGAGCCCGCACGCTCCGCACCACTCGCAGCGCCATGTTAGCAGGGGTGCGGGGGTCGCAGCGCTACGCCTCGGCCACCCGCGCCGGGAGGCGGGGCGGGGAGGGGCC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_14814:HG4_PB_pbsv_17974:HG3_PB_pbsv_17737:HG2_PB_pbsv_18047:HG4_PB_assemblyticsfalcon_12277:HG3_PB_assemblyticsfalcon_12472:HG4_PB_SVrefine2PBcRDovetail_9050:HG3_Ill_GATKHCSBGrefine_11672:HG3_Ill_MetaSV_2446:HG3_PB_SVrefine2PBcRDovetail_8802:HG2_PB_SVrefine2Falcon2Bionano_8858:HG2_10X_SVrefine210Xhap12_12536:HG2_PB_SVrefine2Falcon1plusDovetail_5628:HG2_PB_SVrefine2PBcRplusDovetail_5181:HG2_PB_SVrefine2PB10Xhap12_13148:HG2_Ill_SVrefine2DISCOVARplusDovetail_5992:HG3_PB_SVrefine2Falcon1Dovetail_11197:HG4_PB_SVrefine2Falcon1Dovetail_11216:HG2_Ill_breakscan11_4840:HG3_PB_HySA_27102:HG4_PB_HySA_26182;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5992:HG2_PB_SVrefine2PB10Xhap12_13148:HG2_PB_SVrefine2PBcRplusDovetail_5181;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0481513;ClusterMaxSizeDiff=0.0481513;ClusterMaxEditDist=0.195763;PBcalls=16;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1148;DistBack=998;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=19:24033178-24033184;PctSeqSimilarity=0.9996;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=2579.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:91:1/1:0:32:0:19:1/1:0:23:0:11:1/1:0:28:./.:15:137:.:5110:.
chr19	24156086	HG3_Ill_SVrefine2DISCOVARDovetail_12750	G	GGAGGAGAGAAGGAGGAGGAGGAGAAGAGGAGGAGGAAAAGAAAAGAAGGATGAGGAGAGGAGGAGGGAAAAAAGGGGAGAGGAGGAGAAAAAGGGAGGAGGGAGAGAGAAGGAGAAGCAGGAGAGACAAAGGAGGACAGGAGGAGGAGAGGAGGATGAGGAGAAGGAGGATCAGAGGGAAATGAGAAGGAAGAGAGGAGACAGAGGAGAAGGAGCAGGAGGAGAAGAGGAGGAGGGGGAAAAAGGAGGAGGAGACAGGAGGAGAGGAGAAGGAGGAGGAGAGAAGGAGGAGGAGAGGAGAAAAAGGAGGAGGAAAAGGAGAGAAGGAGCAGAGGAGGAGGAGAAAAAGAAAAGGAAAAGGAGGAGGAGGAAGAAAAGAGAAGGAGGAAGAGAAGAAGAAAAAGGAGGAGAGGAGGAGAGGAGAAGAAGGAGGAGGAGACGAAAAGAAGAATGAGGAGAGCAGAAGAGAAAAAGGAGTAGAGGAGGAAGAGGAGAGGAGGAGAATGAGGAGGAGAAGGAGAGGAAAAGAATAAGGAGGAACAGAGAAGGAGGAGGAGGAGCAGGAAGAGATGAGGAGGAGAGGAGGACGAGGAGAGGAGAAGGAAGAGACAAGGAGGAAGAGAAGGAGAAAGAGGAGAGGGGGAAAGAAGGAGAGGAGGAGAAAAAAGAAGAGAAGGAGACGACGGGGAGGAGGAGAGGAGAAGGAGGAGGAGAAAGAATAGGAGAGGAAGAGGAGGAGGCAAGGAGAAGGAGGAAGAGAAAAATAGGAGGAGAAGAGGAAGAGGAAAGGAGGAGAAGAGGAAGAGGAAAGGAGGAGAAGGAGAGGAGGAGGAGAGAAGGAGGAGGGGAAGAAGGGAAATAGGAGAAGGAGGAGGAGAGATTAGGAGAAAAAAGGAGGAGAGGAGGAGAGAAAGAGGAGAAGAAGAAGCAGAGAAGGAGAAGGAGAGGAAAAGAAGGGGGAGAGGAGGAAAGGAAAAAGGAGGAGCAGGAGGAGGGGGGAGGAGGAGAGGAGAAAAATAAGATGAGGAGGAAATGAGAAGGAAAAGGAGGAGAGGAGAAGGAGAGGAGGAGGAGAAGAAAAAAGAAAAAAATGAGGAGGAGTAGGAGAGGAGAGGAAGGAAGAGAAAAAGGAGGAGAGGAGGAGCAGAGGAAAAGGAGGACAGGAGGAAGGCAAAAGAAGAAGGAGGAGAGAAGAAGGAGAAAAGGAGGAAGAGAAGAAAAGGAGGAGGTGCAGGATGAAAAAAGGGAGGAGTAGGAGAGAAGGAGGAGGTGGAGGAGAAGAGGAGAAGCAAGAAGAGACAAAAAGGAGGAGGAGGAGAGGAGAAGGAGTGGAGAATAAGGAGAGAAGAAGGGGGAGAAGAGGAGAAGGAGGAGGAGGAAAGGAGGAAAATAAAAAGGAGAAGAGGAGAGGAGGAGAGGAGGAAAAGAAAAAAGAGGGGAGGAGGAGAGGAGAAGGAGGACAAAGAGGAAGAATGTAGAAGACAGTAAGGAGAGGAGAGAAAAAGGAGAGGAGGAAAAGGAGAGGAGGAGGAGAGGAAGAGAGGAGGAAGAGAGTAGAAGAAGGAGTAGGAGGAGCAGGAGGAAAAGAAAAGGAGAGGAGAAGAAAAGGAGAAGGAGGAGGAGTGGAGGAGGAAGAGATGAGAGAATGAGAAGGAGGAGGAGGGGAGGAGTAGAGGAGAGGAAGGAAGAGAAAGAAAGGAGAAAGAGGAGGAAGAGAGAAGAAGAAGGAGGAAAAAAGAGAAGAGGAGGAGAGTAGAGGGAGGAGGAGTAAGAAAAGGGAAGGAGGAGAGGAGAAGAAGGAGGAGAATAGGAGCAAAAGATGAGTAGGAGGGGGAGGAGAGGGGGAGGTGGAGAGGTTTGGGGGGGAGGAGGAGAAAAGAATGAGGAAGAGAGGAGGAAGAAAAGAGAAGGAGGAAGAGGAGGAGAGAAAAAGAAGGAGAAGGAGATGAGAAAGAGGAGGAGGAAAGTAGAAGGAGGAGGAGGGGAGGAGGAGCAAAAGGAGGGGAGGAGGTGAAAAATGAGGAGAGGAGGAGGAAATGGAGAGGATGAGGGGGGAGGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_14815:HG4_PB_pbsv_17976:HG2_PB_pbsv_18048:HG3_PB_pbsv_17738:HG4_PB_assemblyticsfalcon_12278:HG4_PB_pbsv_17975:HG3_PB_HySA_27104:HG2_PB_HySA_32722:HG4_PB_HySA_26183:HG4_PB_SVrefine2PBcRDovetail_9051:HG3_PB_SVrefine2PBcRDovetail_8803:HG4_Ill_SVrefine2DISCOVARDovetail_12536:HG3_Ill_SVrefine2DISCOVARDovetail_12750:HG2_PB_SVrefine2PBcRplusDovetail_5182:HG2_PB_SVrefine2PB10Xhap12_13149:HG2_Ill_SVrefine2DISCOVARplusDovetail_5993:HG3_PB_SVrefine2Falcon1Dovetail_11198:HG4_PB_SVrefine2Falcon1Dovetail_11217:HG2_PB_SVrefine2Falcon1plusDovetail_5629:HG2_PB_SVrefine2Falcon2Bionano_8859:HG3_PB_HySA_27103;NumClusterSVs=21;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_12750:HG4_Ill_SVrefine2DISCOVARDovetail_12536;NumExactMatchSVs=2;ClusterMaxShiftDist=0.122735;ClusterMaxSizeDiff=0.122735;ClusterMaxEditDist=0.23301;PBcalls=18;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=2058;DistBack=179;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=19:24156087-24156154;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9995;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2580.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:48:1/1:3:20:2:14:./.:25:98:8:76:1/1:0:10:./.:17:238:.:2047:.
chr19	24265472	HG3_PB_pbsv_17741	C	CAAAAAAAAAATTACAAAACCAATGCTACAGCAGCTCAAGACAGAAGTTAAAATAAATCCGTCTTGTAACTTTCTTCTTTTTAAGGTTTTTGGTCGGCTTTTTTACTTAAAATATTTTAAAAAGGTAACAATACAGGCTTAGGGAGGTGGCCTCCGCGCGTAATCCAGCCACTCTTGGACGAGCGGCCGAGCGGCCTCCAGCGTCGTACATCACAAGGTAAGAGATCGAGACATCCTGGCAACGCATAGTGCACCTGTCTCTACTAAAAATACAAAAACTTTAGCGCGATGTAAAGTGGCACTCACCTGTACGTCAGCTAACTCCGGCAGGCTGAGAGCAATCGAACTCCGCTGGAACTGGAGGTGGAGGTTCAGTGACAATGTCACGCCACTGCACTCCAGCCTAGGTGTATGACAGAGGGAGACTTTCCATCTCAAAAAAAAAATAAAACGAAAAAAAGAGAAATAAAATTTCCTCGTTCACATCTTCCTTCTGGCCTGAGACAATTAATGGCTCTAAGTCTTTGACTCTTAAGAGCCTAGCCATAGGGAATCTGCCAATGCGGACAACTGACACTGTACAATTAATGACTTTCCTGTGACAAAACTTTTTCTTCTCCCTAATCCCAAAATAACCAGTATATGGTTTGATACAAAAATCGGACGGAAAAATAGATTTTCTACTGTTACATCTATAACAATATAGGACACTCGAGGACCAGGGAATTTCTTGCATTGAATTTACACTCCTCTAGATACTATACCTATGCGATAAATTGGCTGGAAAAAAATAATTTATTATATTTAATAATGTTGCGTCCCCATTCTCAAAGTAAGATTTATTCAGGTCAAATACCTTGATAAGGAGGAAAAACAGGTGTAGTTGATCAGAAGTCGATATGTGCAGTGGTTTTTTGGACTGCGGTTAGGCTGTTTTATGCCTCTGATCTACCCTTATAACCTTTTGGGTGCCTAATCCTTGCTACTTCTTGCTTATATTTTTTTGAAAATATCACTATGCGGACTGCAAGAGAAGAAAGCACAATTAAGACCTGCTCTGCAACACTCAGAAATAGGTATTTTTCTCTAAATTTATTTATTTTAGATTACAACCTGGCTGACTCATCTTCACCTTAAACAAATTGGCTGTTTCATCCAGGTATGACGATATGTTCCTCCCTGCATTATCAAATTGTCAATATTTAAAAACTACTACCAAAACCAGACTATCTAGAGTGAGACCTTCCTAGCTCTGTGGGAAGCTCACTACAATGACCAGATCAACAACTCTAGGAAGAACCCTTCTCAGTAGCCATGGACCTACTGCTGTTGCTTGCGTATGCTTCTGCTGGAATGCTTTTTGGCCAAAGAGGGGACTGAGGATGACTTCTGATTTTTTATCTTCCCAATTTGACACTAGGCCGAATACTAGGGTAGTCATGCCCTTACACAACATAAATTCTATCAATGCAGGTTTAGTTGACCTCATATGTCATGACTTTAACCTTTTCAGTTAACTCTCGGATAATTATGAGAACAAAGAAAAGTTATTTAACCCAAAATATATTCTAATTGCCATATCTGGACATTGCCGCAAATAGTCTCTTGTGGGGCAAAATTCCATTCTGTAGGCGATCTCTTCCCTTTTTGTTGTCCTTTTTCCCTGTGCAGATCCAGGAGATAACCTCAACTAAGAGCCCGGCACCCTTTTAGGTCTTATAGAAACACTTTTACACACTCGTCTTCTCTCTGAGTCAGCAATCTTTGAGAGATTTCTACTGCCACAGCTAACCATTAGCGTCTCCACAAATCCTTTACCTTAACCTAAGAAATTCCCTTTTATTGATCCCTCAATCTTCAGATAAATCTCCACAATGTCAACCAGAAAAACCTTAAATTTACCACAGGAAAGACCCACCGCGCTGTTGAGTTGTCAACCATTCTAATCAACTTAATGTTTTCTTTTTTGTTTTTTTTTTTTGAGACGGCGTTCCACTCTGTCGCCCAGGTGGAGTGCAAGTGGCGGGGATCCGGACTCCTGCAAGTTCCGCCCTCCCGGTTACGCCCATTTCCTGCCTCAGCCCTCCAAAGAACCCAAAATAGCTGGGGACTACAGGCGGCCGCACCACGCACCGGCCTAATTTTTTTTGCTATTTTTAGTAGAGACCGGGGTTCACACTTTTAGCCAGGAGATGGTCTCGATCTCCCTGACCTCGATGTCCGCCCGACCTCGGGCCTCAAAGTGCTGGATTACAGGGTGAGCCACTGCATCGCATTGGGGACAGGTGCAGTGCTCACGCCTGTAATTCCAGCACTTTGGCGAGGCCGAAGGCGGGTGCGGATCACGGAGTCAAGGAGATTGAGGACTATCAGGCTTAACACGGTCGAAAACTTCAGTCTCTACTAAACTATGAAAATAATTAGGGCATGGTGGCATTGTCTGTAACTCCCAGTAACTTGGAGGCTGAGGCAGAGATCCTTCTTGAATGGGGCGGAGTTGCAGTGAGCCAGATCGCGCAATGATCCAGTCTGGCGACACCAACATGAGATTCCATCTCAAAAAACAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5630:HG3_PB_pbsv_17741:HG2_PB_PB10Xdip_14819:HG4_PB_pbsv_17977:HG2_PB_HySA_32726:HG2_PB_pbsv_18051:HG2_PB_HySA_32725:HG4_PB_HySA_26184:HG3_PB_SVrefine2Falcon1Dovetail_11200:HG3_PB_SVrefine2PBcRDovetail_8805:HG4_PB_SVrefine2Falcon1Dovetail_11218:HG4_PB_SVrefine2PBcRDovetail_9052:HG2_PB_SVrefine2PB10Xhap12_13151:HG2_PB_SVrefine2PBcRplusDovetail_5183:HG2_PB_SVrefine2Falcon2Bionano_8860:HG4_Ill_SVrefine2DISCOVARDovetail_12537:HG2_Ill_SVrefine2DISCOVARplusDovetail_5995;NumClusterSVs=17;ExactMatchIDs=HG3_PB_pbsv_17741;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0517142;ClusterMaxSizeDiff=0.0509481;ClusterMaxEditDist=0.264672;PBcalls=15;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=2572;DistBack=1;DistForward=2737;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=148;REFWIDENED=19:24265333-24265480;PctSeqSimilarity=0.9126;PctSizeSimilarity=0.9946;PctRecOverlap=0.939;SizeDiff=14;StartDistance=150;EndDistance=150;GTMatch=0;TruScore=94;MatchId=2581.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:5:105:1/1:1:23:2:39:0/0:7:0:17:0:0/0:37:0:0/1:16:84:.:2446:.
chr19	28310234	HG2_PB_assemblyticsPBcR_12054	TGAATTT	CTTTCTTATTAGTCTATCTAGTGGTGTAGCTATATGATTTTTTTAAAAAATCTCCTGAATTTATTGATCTTTTGAATGGTTTCTCATGTCTCTATTTCCTTTAGTTCAGCTCTGGTTTTTTTCTTGGTTATTTATTGTCTTCTGCTAGCTCTCTGGTTTCTTTGCTCTTGTTTCTGTAATTATTTCAGTTGTGATGTTATGTTGTTAACTTGAGATCTTTCTAGCTTTTTAATGTGGGCAGTTAGTGCTATAAATTTTCCTCTTAACCCTCCCTTAGCTGTGTCCCAGAGATTCTGGTATGTTTTGTCCTTTTTCGCATTGGTTTCAAAGAACTTCTTGATATTGGCCTTAATTTCATTATTTATCCAAAAGTCATTCAGGAGCAGGTTATTCAATTTCCATGTAATTTTATGGTTTTCAGTAAATTTCTTCATCTTAAGTTCTAATTTGATTGTGCTGTGGTCTGAAACACCGTTTTTTATGATTTCAGTTCTTTCTATTTGCTGAGGAGTGTTTTACTTCTGACTATGTGACCAATTTTAGAGAAAGTGCCATGTGGTGATGAGAAGAATGTATATTCTGCTATTTTGGGGTAGAGAGTTCTGTAAATATCTGTCACATTTATTTGATCTAGAGCGAAGTTCACGTCCTGAATATCTTTGTGAATTTTCGATCTCAATGAACTGTCTAATATTGTCAGTGGGATGTTAAAGTCTCCCACTATTATTGTGTGGCAGTTTAAGTCTCTTTGAAAGTCTCTACGAGCTTGTTATATAAATCTGGGTACTCTTGGGTTGGGTGCATATATATTTAGGATAGTTAGTTCTTCTTATTGAATTGAACCCTTTGCCATTATGTAATGCCTCTCTTTGTTTTTGTTTTGTTTTGTTTCATTTTAACCTGTGTTTTTTTAAACTATGTTTTGTTGCAAACTAAGGTTGCAACCCCTTCTTGTTTCTGTTTTCAATTTGATTGGTAAAATTTCCTCCATCCCTTTATTTTTAACCTATATGTGTCACTGCCTTTCAGAGGAGTGTTTTGAAGACAGCATACCAATAAGTCTTGGCTCTTTATTCACTTTATTTGTAGATTTGATCTGGTCATTTTGATGCTAGCTGTTTATTTGTAGACTTGTTTAAGTGGTTGACATAGTGTCAGTGGTCTGTGTACTTCAGGGTGCTTTTGCAGTGGCTGGAAATAATTTTTTCTTTCCAAATTAGTGCTTCTTTCAAGATCTCTTGAAAGACAGGTCTGGGGACAATGAATTACCTCAGCATTTGCTTGTCTAAAAGGAATGTTATTTCTCCCTAGCTTAGGCTTAGTTTGGCCAGATACAAAATTCTGGGTTAAAATCAACTAGGAAAAGGGGAAGTCAGATTGTCCCTGTTTACAGATGACATGATTGTATATCTAGAAAACCCCATCATCTCAGCCCAAAATGTCCTCAAGCTGATAAGCAACTTCGGCAACGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTTTTCAAGGAGAACTGCAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAAAACATTCCATGCTCATGGGTAGGAAGAATCAATATCATGAAAATGTCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACCTTAAAGTTCATATGGAACCAAAAAAGAGCCCTCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAA	20	PASS	ClusterIDs=HG2_PB_pbsv_18061:HG3_PB_pbsv_17753:HG4_PB_SVrefine2PBcRDovetail_9059:HG4_PB_pbsv_17986:HG3_PB_SVrefine2PBcRDovetail_8814:HG2_PB_assemblyticsPBcR_12054:HG2_PB_SVrefine2PBcRplusDovetail_5193:HG2_PB_SVrefine2PB10Xhap12_13160:HG2_PB_PB10Xdip_15014:HG2_10X_SVrefine210Xhap12_12548:HG2_PB_assemblyticsfalcon_12431:HG2_PB_SVrefine2Falcon1plusDovetail_5640:HG2_PB_SVrefine2Falcon2Bionano_8865:HG4_PB_assemblyticsfalcon_12282:HG4_PB_SVrefine2Falcon1Dovetail_11223:HG3_PB_SVrefine2Falcon1Dovetail_11204;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_15014:HG2_PB_SVrefine2PB10Xhap12_13160:HG2_PB_SVrefine2PBcRplusDovetail_5193:HG2_PB_assemblyticsPBcR_12054:HG3_PB_SVrefine2PBcRDovetail_8814:HG4_PB_SVrefine2PBcRDovetail_9059;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0502666;ClusterMaxSizeDiff=0.0472201;ClusterMaxEditDist=0.219488;PBcalls=15;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1921;DistBack=-7;DistForward=-1;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=19:28310241-28310233;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9984;PctRecOverlap=0.9979;SizeDiff=-3;StartDistance=-6;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2583.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:87:1/1:0:32:0:26:./.:0:0:0:0:./.:0:4:1/1:17:330:.:1804:.
chr19	29223827	HG4_Ill_MetaSV_2377	A	ATGCCAATATCTGTTATTTTTTGACTTTTTAATTAATAGCATTTTGATTGGAATGAGATGTTCTCTCATGGTGATTTTGATTTGCATTTTTCTGATGAGTAGTAATATTGAGCACTTTTTTCATATGCTGTTGGCCACACGTATGTCTTTTGAGAAGTGTCTGTTCATGTTCACATCCTTTGCTCACTTTTCAATGGGGTGGTATTTGTTGTTGCTGATTCATTTAAGTTCCCTATAGATACTGGATACTAGTTCTTTGTTGGATGTATATATTGAATAAGGTATCTCTACCCATTACTTTGTTGTTGTTGTTGTTACCTTTGTTGAAGATCAGTTGATTGTAGGTGTGCATCTTTATTTCTGAATTATCTATTCTGTTTCATTAGTCTATTCTGTTTCATTAGTATCAGTAACATACTGTTTTGGTTACTGTAGCCTTGTAGTAGTTTGAAATCAGGTGATGCGATGCCTCTGGCCTTGTTCTTTTTACTTAGGATTGCTTTGGGTATTCAGGCACTTTGTTGGTTCCACATGAAATTTAGAATAGTTTTTCCTAGTTTTGTGGAAAATGAAGGTGGTAATTTGATAGGAATGCATTGAATT	20	PASS	ClusterIDs=HG2_Ill_Spiral_1166:HG4_PB_pbsv_17992:HG2_PB_assemblyticsPBcR_12060:HG2_PB_assemblyticsfalcon_12435:HG2_PB_SVrefine2PBcRplusDovetail_5196:HG3_PB_SVrefine2Falcon1Dovetail_11206:HG2_PB_SVrefine2Falcon2Bionano_8867:HG2_PB_SVrefine2Falcon1plusDovetail_5641:HG4_PB_SVrefine2PBcRDovetail_9063:HG4_Ill_SVrefine2DISCOVARDovetail_12545:HG4_Ill_MetaSV_2377:HG4_Ill_GATKHCSBGrefine_12186:HG2_Ill_GATKHCSBGrefine_11794:HG2_10X_SVrefine210Xhap12_12553:HG2_PB_SVrefine2PB10Xhap12_13163:HG4_PB_HySA_26196:HG2_PB_pbsv_18065:HG2_PB_PB10Xdip_15016:HG4_Ill_Spiral_1388;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12553:HG2_Ill_GATKHCSBGrefine_11794:HG4_Ill_GATKHCSBGrefine_12186:HG4_Ill_MetaSV_2377:HG4_Ill_SVrefine2DISCOVARDovetail_12545:HG4_PB_SVrefine2PBcRDovetail_9063;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0570962;ClusterMaxSizeDiff=0.0554649;ClusterMaxEditDist=0.215088;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=602;DistBack=1;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=19:29223828-29223829;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2584.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:50:0|1:29:1:1:40:0|1:18:0:0:25:0/1:19:8:0/1:9:54:.:.:.
chr19	29238735	HG3_Ill_GATKHCSBGrefine_11685	T	TATATGATATGTATACCATATCATATTATGATATGATATATATACCATATCATATTATGATATGATATATCATA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22258:HG2_PB_pbsv_18066:HG3_PB_pbsv_17756:HG3_Ill_manta_3935:HG3_Ill_GATKHC_28257:HG3_Ill_GATKHCSBGrefine_11685:HG3_Ill_250bpfermikitraw_22972:HG2_Ill_manta_4798:HG2_Ill_Krunchall_23971:HG2_Ill_GATKHC_28358:HG2_Ill_GATKHCSBGrefine_11795:HG2_Ill_250bpfermikitraw_23638;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22258:HG3_Ill_manta_3935:HG3_Ill_GATKHC_28257:HG3_Ill_GATKHCSBGrefine_11685:HG3_Ill_250bpfermikitraw_22972:HG2_Ill_manta_4798:HG2_Ill_Krunchall_23971:HG2_Ill_GATKHC_28358:HG2_Ill_GATKHCSBGrefine_11795:HG2_Ill_250bpfermikitraw_23638;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0533333;ClusterMaxEditDist=0.186667;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=14905;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=10;REFWIDENED=19:29238734-29238746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2585.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:0|1:28:2:6:28:1|0:1:36:25:0:0/1:28:13:./.:.:.:.:.:.
chr19	29501030	HG2_PB_SVrefine2PBcRplusDovetail_5198	C	CACACATACACCCGCCTAACTCACATATGCACCTAGCACACATAGACACATGCACATTCACACATATACCCACCTAACACACACCTAACACAAATATATACACATACACACGCCCACCTAACTCACACACACACTCCTAACACACATATATACACATACAGACATATACCCACCTAACACACACACACCTAACACAAATATATACACATACATATGCCCGCCTAACACACACACACTCCTAACACACATATATACACATACAGACGTATACCCACCTAACTCACACACACACCCCTAACACACATGTATACACATACACACATACACCCACCTGACTCTCACACACACACCTAACACACATATATACACATACGCCCACCTAACACACACACCCCAGCACACATATATACACATACACACATATATACACATACACACCCATCTAACACACACACCCCTAACACACACCTGACTCACACACACACACCTAACACACATATATACACATGCACACATACACCCACCTAACACACACACCCCTAACACACATACACACATATACACACACCCACCTAACACACACACACCCAACACACATATATGCACATACACACATACACCCACCTGACTCACACACACACCTAACACACATATACACATACACGCATACACCCACCTAACACACACATACCTAACACACATATACACACATTCACACATACACCCACCTGACTCACACACACTCCTAACACACATATAGATACATACACACATACACCCACCTAACTTACACACCCCTAACACACATATAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11209:HG4_PB_pbsv_17996:HG2_PB_pbsv_18068:HG3_PB_pbsv_17760:HG2_Ill_MetaSV_2302:HG3_Ill_GATKHCSBGrefine_11686:HG2_Ill_GATKHCSBGrefine_11797:HG4_Ill_GATKHCSBGrefine_12188:HG2_PB_PB10Xdip_15024:HG2_Ill_breakscan11_4842:HG4_PB_HySA_26205:HG2_PB_HySA_32757:HG3_Ill_SVrefine2DISCOVARDovetail_12760:HG2_PB_SVrefine2Falcon1plusDovetail_5645:HG4_PB_SVrefine2Falcon1Dovetail_11229:HG4_Ill_SVrefine2DISCOVARDovetail_12546:HG2_PB_SVrefine2PBcRplusDovetail_5198:HG2_PB_SVrefine2Falcon2Bionano_8869:HG2_Ill_SVrefine2DISCOVARplusDovetail_6006:HG2_PB_SVrefine2PB10Xhap12_13167:HG3_PB_SVrefine2PBcRDovetail_8819:HG4_PB_SVrefine2PBcRDovetail_9066;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6006:HG2_PB_SVrefine2Falcon2Bionano_8869:HG2_PB_SVrefine2PBcRplusDovetail_5198:HG4_Ill_SVrefine2DISCOVARDovetail_12546;NumExactMatchSVs=4;ClusterMaxShiftDist=0.161616;ClusterMaxSizeDiff=0.161616;ClusterMaxEditDist=0.234772;PBcalls=14;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=811;DistBack=99738;DistForward=130;DistMin=130;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=145;REFWIDENED=19:29501031-29501175;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9902;PctRecOverlap=0.8462;SizeDiff=-8;StartDistance=-122;EndDistance=-122;GTMatch=0;TruScore=93;MatchId=2586.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:84:1/1:1:39:0:18:1/1:11:277:6:191:1/1:0:12:1/1:3:182:.:.:.
chr19	30058543	HG2_Ill_GATKHCSBGrefine_11804	G	GGCTGGTGTGATGGGCACATGGGAGGGACTGCTATGATAGGCACAGGGGAGAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4843:HG4_PB_pbsv_18001:HG2_PB_HySA_32779:HG2_PB_PB10Xdip_15036:HG4_Ill_svaba_22146:HG2_PB_pbsv_18074:HG4_Ill_scalpel_16359:HG4_Ill_GATKHC_28395:HG4_Ill_GATKHCSBGrefine_12193:HG3_Ill_svaba_22371:HG3_Ill_scalpel_17082:HG3_Ill_GATKHC_28279:HG2_PB_assemblyticsfalcon_12456:HG2_PB_assemblyticsPBcR_12079:HG2_Ill_svaba_22161:HG2_Ill_scalpel_16726:HG2_Ill_GATKHC_28381:HG2_Ill_GATKHCSBGrefine_11804:HG2_Ill_250bpfermikitraw_23654:HG2_Ill_150bpfermikitraw_22274:HG2_PB_HySA_32778:HG3_Ill_Spiral_18274;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22274:HG2_Ill_250bpfermikitraw_23654:HG2_Ill_GATKHCSBGrefine_11804:HG2_Ill_GATKHC_28381:HG2_Ill_scalpel_16726:HG2_Ill_svaba_22161:HG2_PB_assemblyticsPBcR_12079:HG2_PB_assemblyticsfalcon_12456:HG3_Ill_GATKHC_28279:HG3_Ill_scalpel_17082:HG3_Ill_svaba_22371:HG4_Ill_GATKHCSBGrefine_12193:HG4_Ill_GATKHC_28395:HG4_Ill_scalpel_16359:HG4_Ill_svaba_22146;NumExactMatchSVs=15;ClusterMaxShiftDist=0.110092;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.267857;PBcalls=7;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=-1;DistForward=11158;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=18;REFWIDENED=19:30058542-30058562;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:31:1/1:1:8:2:10:./.:4:21:17:34:0/1:1:7:./.:.:.:.:.:.
chr19	30835211	HG2_Ill_GATKHC_28390	T	TTTATATATATATATATATATATATATATATATATATATATATATATAAACTGGGCGTGG	20	PASS	ClusterIDs=HG2_PB_pbsv_18084:HG4_PB_HySA_26223:HG3_PB_HySA_27145:HG4_Ill_scalpel_16371:HG4_Ill_manta_4083:HG4_Ill_GATKHC_28406:HG4_Ill_GATKHCSBGrefine_12202:HG4_PB_assemblyticsfalcon_12314:HG3_Ill_manta_3937:HG3_Ill_GATKHC_28288:HG3_Ill_GATKHCSBGrefine_11697:HG2_Ill_manta_4805:HG2_Ill_GATKHC_28390:HG2_Ill_GATKHCSBGrefine_11813:HG2_PB_HySA_32796:HG3_Ill_Spiral_18280:HG3_PB_SVrefine2PBcRDovetail_8829:HG4_Ill_150bpfermikitraw_22433:HG2_PB_assemblyticsPBcR_12090:HG2_PB_PB10Xdip_15110:HG2_PB_assemblyticsfalcon_12468:HG2_PB_PB10Xdip_15111;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11813:HG2_Ill_GATKHC_28390:HG2_Ill_manta_4805:HG3_Ill_GATKHCSBGrefine_11697:HG3_Ill_GATKHC_28288:HG3_Ill_manta_3937:HG4_PB_assemblyticsfalcon_12314;NumExactMatchSVs=7;ClusterMaxShiftDist=0.244275;ClusterMaxSizeDiff=0.242424;ClusterMaxEditDist=0.259542;PBcalls=10;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=59;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=19:30835210-30835213;PctSeqSimilarity=0.9836;PctSizeSimilarity=0.9672;PctRecOverlap=0.9672;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2588.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:81:1/1:2:33:1:30:1/1:0:16:0:9:./.:0:7:./.:.:.:.:.:.
chr19	31013159	HG2_PB_SVrefine2PB10Xhap12_13183	G	GATATATATATATATATGTGTATATATATATATATATATGTATATATATATATATATATACAC	20	PASS	ClusterIDs=HG2_Ill_svaba_22167:HG4_PB_HySA_26226:HG2_PB_HySA_32802:HG4_PB_pbsv_18014:HG2_PB_pbsv_18086:HG3_PB_pbsv_17775:HG2_Ill_breakscan11_4846:HG3_PB_SVrefine2PBcRDovetail_8831:HG3_Ill_Spiral_18282:HG3_PB_SVrefine2Falcon1Dovetail_11222:HG2_PB_SVrefine2Falcon1plusDovetail_5655:HG4_PB_SVrefine2Falcon1Dovetail_11244:HG4_Ill_SVrefine2DISCOVARDovetail_12555:HG4_Ill_GATKHC_28409:HG4_Ill_GATKHCSBGrefine_12203:HG4_Ill_250bpfermikitraw_23326:HG4_Ill_150bpfermikitraw_22436:HG3_Ill_SVrefine2DISCOVARDovetail_12771:HG3_Ill_GATKHC_28292:HG3_Ill_GATKHCSBGrefine_11698:HG3_Ill_250bpfermikitraw_22991:HG3_Ill_150bpfermikitraw_22309:HG2_PB_SVrefine2PBcRplusDovetail_5211:HG2_PB_SVrefine2PB10Xhap12_13183:HG2_PB_SVrefine2Falcon2Bionano_8880:HG2_Ill_scalpel_16739:HG2_Ill_manta_4806:HG2_Ill_SVrefine2DISCOVARplusDovetail_6020:HG2_Ill_GATKHC_28393:HG2_Ill_GATKHCSBGrefine_11814:HG2_Ill_250bpfermikitraw_23662:HG2_Ill_150bpfermikitraw_22282:HG2_PB_PB10Xdip_15112:HG4_Ill_svaba_22155:HG3_Ill_svaba_22380;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22282:HG2_Ill_250bpfermikitraw_23662:HG2_Ill_GATKHCSBGrefine_11814:HG2_Ill_GATKHC_28393:HG2_Ill_SVrefine2DISCOVARplusDovetail_6020:HG2_Ill_manta_4806:HG2_Ill_scalpel_16739:HG2_PB_SVrefine2Falcon2Bionano_8880:HG2_PB_SVrefine2PB10Xhap12_13183:HG2_PB_SVrefine2PBcRplusDovetail_5211:HG3_Ill_150bpfermikitraw_22309:HG3_Ill_250bpfermikitraw_22991:HG3_Ill_GATKHCSBGrefine_11698:HG3_Ill_GATKHC_28292:HG3_Ill_SVrefine2DISCOVARDovetail_12771:HG4_Ill_150bpfermikitraw_22436:HG4_Ill_250bpfermikitraw_23326:HG4_Ill_GATKHCSBGrefine_12203:HG4_Ill_GATKHC_28409:HG4_Ill_SVrefine2DISCOVARDovetail_12555;NumExactMatchSVs=20;ClusterMaxShiftDist=0.137405;ClusterMaxSizeDiff=0.137405;ClusterMaxEditDist=0.225564;PBcalls=13;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=42;REFWIDENED=19:31013160-31013201;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:66:1/1:4:23:0:33:./.:1:10:1:7:1/1:0:37:./.:.:.:.:.:.
chr19	31152764	HG4_PB_pbsv_18015	G	GCTGTAAATCCCATCAACTATTGGGAGGCGAGGCGGGCGGATTCACGACGGGTAGGGAGATCCGAGACATCCCGGCTAAAACGTGTGAACACCCGTCCTCTATAACAATACCATAACATTCGCGCGCGGTTAGTGCTGGGGCGGCCTGTAGTCCACGCTACTTGGAGCTGAGGCAGAGAATGGCCGTGCAAGCCCGGGAGGCGGGAGCTTTGCAGTAGCCGAGATCCGCCACTGCACTCCCGCCTGGGCGACAAGCGAGGACTCCGTCTCAAACAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAACAATTAGATA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11223:HG4_PB_pbsv_18015:HG4_PB_assemblyticsfalcon_12319:HG2_PB_assemblyticsfalcon_12470:HG2_PB_HySA_32804:HG2_PB_pbsv_18087:HG2_Ill_breakscan11_4847:HG2_PB_SVrefine2Falcon1plusDovetail_5656:HG4_PB_SVrefine2Falcon1Dovetail_11245;NumClusterSVs=9;ExactMatchIDs=HG4_PB_pbsv_18015;NumExactMatchSVs=1;ClusterMaxShiftDist=0.130159;ClusterMaxSizeDiff=0.130159;ClusterMaxEditDist=0.237805;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=13;DistForward=2344;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=19:31152765-31152764;PctSeqSimilarity=0.923;PctSizeSimilarity=0.9785;PctRecOverlap=0.9446;SizeDiff=7;StartDistance=15;EndDistance=15;GTMatch=0;TruScore=94;MatchId=2590.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:30:0|1:25:2:0:19:./.:27:0:0:3:0/1:25:5:0/1:4:14:.:.:.
chr19	31690670	HG2_PB_SVrefine2PB10Xhap12_13187	A	AAGAGAATTAAATGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCTGCAGTCCGGCCTGGGAGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG4_PB_HySA_26228:HG4_PB_pbsv_18017:HG3_PB_HySA_27150:HG2_PB_pbsv_18090:HG2_PB_HySA_32809:HG3_PB_pbsv_17777:HG2_PB_assemblyticsPBcR_12099:HG2_PB_assemblyticsfalcon_12475:HG4_PB_assemblyticsfalcon_12323:HG2_PB_PB10Xdip_15117:HG2_Ill_breakscan11_4848:HG2_PB_HySA_32808:HG4_PB_SVrefine2PBcRDovetail_9076:HG3_PB_SVrefine2Falcon1Dovetail_11225:HG2_PB_SVrefine2PBcRplusDovetail_5212:HG2_PB_SVrefine2PB10Xhap12_13187:HG2_PB_SVrefine2Falcon2Bionano_8882:HG2_PB_SVrefine2Falcon1plusDovetail_5659:HG4_PB_SVrefine2Falcon1Dovetail_11247:HG2_Ill_MetaSV_2310;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13187:HG2_PB_SVrefine2PBcRplusDovetail_5212;NumExactMatchSVs=2;ClusterMaxShiftDist=0.127955;ClusterMaxSizeDiff=0.125174;ClusterMaxEditDist=0.217033;PBcalls=18;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=362;DistBack=19935;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=19:31690671-31690684;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9945;PctRecOverlap=0.9945;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:67:1/1:2:11:0:11:1/1:0:7:0:6:1/1:0:19:1/1:2:72:.:.:.
chr19	33046483	HG2_Ill_manta_4808	T	TTATATAATATATTATATATTATATATTTAAAATATATAATATATTATATATTATATATTTAAAA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22297:HG3_Ill_manta_3938:HG2_PB_pbsv_18094:HG4_Ill_svaba_22162:HG4_PB_pbsv_18022:HG4_Ill_scalpel_16386:HG4_Ill_GATKHC_28423:HG4_Ill_GATKHCSBGrefine_12207:HG4_Ill_150bpfermikitraw_22448:HG3_Ill_svaba_22390:HG2_PB_assemblyticsPBcR_12107:HG2_Ill_svaba_22178:HG2_Ill_scalpel_16754:HG2_Ill_manta_4808:HG2_Ill_GATKHC_28413:HG2_Ill_GATKHCSBGrefine_11818:HG2_PB_PB10Xdip_15152:HG2_PB_assemblyticsfalcon_12487:HG3_Ill_scalpel_17105:HG3_Ill_150bpfermikitraw_22324;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11818:HG2_Ill_GATKHC_28413:HG2_Ill_manta_4808:HG2_Ill_scalpel_16754:HG2_Ill_svaba_22178:HG2_PB_assemblyticsPBcR_12107:HG3_Ill_svaba_22390:HG4_Ill_150bpfermikitraw_22448:HG4_Ill_GATKHCSBGrefine_12207:HG4_Ill_GATKHC_28423:HG4_Ill_scalpel_16386:HG4_Ill_svaba_22162;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0930233;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.285714;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=64;DistBack=19;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=12;REFWIDENED=19:33046482-33046496;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:9:44:1/1:5:28:4:15:./.:0:1:0:0:1/1:0:10:./.:.:.:.:.:.
chr19	33086911	HG3_PB_SVrefine2PBcRDovetail_8832	T	TTAGCCAGGCATGGATGGTGGCAGGTACCTGTAATCCCAGCTATGCGGGAGGCTGAGGCAGGAGAATTGCTTGAATCTGGGAGGCAGAGGCTGCAGTGAGCCGAGATGGTGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCATCTCAAGAAAATGTTTTCAAAATTATATTGCACTACCCCAACATATTAGGTGGTGTCAAATGTGTGTATTTGTATCTTGAGAATACCTGTGCTGATAAACTGTATAGGATGTATTAATTAGGATGGTATAGAACCACAGCAGCTTCAGTCTATAAGGTGGTTTTGTTTAAAAGTAGGGAAGGCTGGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAAAACCCTGTCTCTACTAAAAATACAAAAACAAAAAAACAACAAAAAAAAAAACAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5663:HG3_PB_pbsv_17781:HG2_PB_pbsv_18095:HG2_PB_PB10Xdip_15153:HG2_PB_HySA_32836:HG3_PB_HySA_27158:HG2_10X_SVrefine210Xhap12_12577:HG3_PB_SVrefine2PBcRDovetail_8832:HG2_PB_SVrefine2PB10Xhap12_13191;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5663:HG3_PB_SVrefine2PBcRDovetail_8832:HG2_PB_SVrefine2PB10Xhap12_13191;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0490296;ClusterMaxSizeDiff=0.044898;ClusterMaxEditDist=0.166;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=490;DistBack=40393;DistForward=47;DistMin=47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=636;REFWIDENED=19:33086912-33087547;PctSeqSimilarity=0.9921;PctSizeSimilarity=0.9939;PctRecOverlap=0.0489;SizeDiff=3;StartDistance=-465;EndDistance=-465;GTMatch=0;TruScore=67;MatchId=2593.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:69:0|1:27:3:3:41:./.:0:6:1:0:./.:0:4:0/1:4:6:.:.:.
chr19	33949706	HG2_PB_SVrefine2PBcRplusDovetail_5219	A	AGGGCATGTGTAGTGTGAGGGGTGTGTATGTGGTGTGCGGGAGTGTGTGGTGTGTATGGCATGCGTGGCGTGTATGTGGTGTGTATGGTGTGGTGTGTGTGGTATGTATGGTGTGTGTGTGGTGTGGGTGGCATGTATGAGGTGTGTGGTGTAGTGTGTGTGTGTAGCGTGGGGGGCATGTGCATGGAGTGAGTGTGGTGTATGTGGCATGTATGGGGTGTGTGGTGTGTTCTGTGTGTGTGTGTGGTGTAGGGGGTATATGTGGTGCATGTGTGTGGTGTATGTGGTGTGTGGGGCATGTGTGTGGTGTATGTGGCTCGTACAGGATGTATGGTGGTGTGTGTGTGGTGCATGGTGTGTATGGTGTGGTGTGTGTGGTGTATGTGGTGTGTGGTGTGGGGGCCATGTGTGTGGTGTATGTGGCATGCACGGGATGTGTGGTGTTGTGTGTGTGGTGTGTATGGCGTGGTGTGTGTTGTGTATGTGGTGTCTGGTGTGTGTGGTGTAGTGTATGGTGTGTTGTGTGTGTTGTGTATGTGGTGTGTGGTGTGTATGGTATGTGTGTCATGTATGTGGTGTGTGGTGTGGGAGGCATGTGTGTGGTGTATGTGGCATGCACAGGATATGTGGTGGTGTGTGTGTGGTATGTATGGTGTGTGTGTTGTGTATGTGGTGTGTGGTGTGTGTGGTGCAGGGGGCATGTGTGTGGTGTATGTGGCATGCACGGGATGTGTGGTGTTGTGTGTGTGGTGTGTATTGTGTGGTGTGTGTCATGTATGTGATGTGTGGAGTGTGTGGTGTGGTGTGGGAGGCAAGTGTACTGTATGTGGCATGCATGGGATGTGTGGTGTTGTGTATGTGGTGTGTATGGTGTGGTGTGTGTGTCGTGTATGTGGTGAGTGGTGTGTATGGTGTGGTGTGTGTCGTGTATGCGGTGTGGAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11255:HG2_PB_pbsv_18099:HG4_PB_HySA_26249:HG3_PB_pbsv_17784:HG2_PB_assemblyticsfalcon_12496:HG2_PB_assemblyticsPBcR_12115:HG2_Ill_breakscan11_4849:HG2_PB_SVrefine2Falcon1plusDovetail_5668:HG4_Ill_SVrefine2DISCOVARDovetail_12568:HG2_PB_SVrefine2PBcRplusDovetail_5219:HG2_PB_SVrefine2Falcon2Bionano_8888:HG4_PB_SVrefine2PBcRDovetail_9081:HG3_PB_SVrefine2Falcon1Dovetail_11230:HG3_PB_SVrefine2PBcRDovetail_8835:HG2_PB_SVrefine2PB10Xhap12_13194:HG2_Ill_SVrefine2DISCOVARplusDovetail_6034:HG2_PB_PB10Xdip_15157:HG4_PB_pbsv_18026:HG3_Ill_SVrefine2DISCOVARDovetail_12786:HG4_PB_assemblyticsfalcon_12340;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8888:HG2_PB_SVrefine2PBcRplusDovetail_5219:HG4_Ill_SVrefine2DISCOVARDovetail_12568;NumExactMatchSVs=3;ClusterMaxShiftDist=0.10788;ClusterMaxSizeDiff=0.106942;ClusterMaxEditDist=0.21854;PBcalls=16;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=941;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=19:33949707-33949716;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:0:28:0:20:./.:81:445:63:399:1/1:0:16:1/1:5:193:.:.:.
chr19	34251169	HG2_Ill_250bpfermikitraw_23691	G	GCCCTTTCTTCCCTCCCTCTCTCCTTCCCTCCCTCCCTCCCTCCCTCTCTCTTTCTTTCTCTTTCTTTCCCTTTCCTCCCCTCCCTCCCTCCCT	20	PASS	ClusterIDs=HG3_PB_HySA_27171:HG4_PB_assemblyticsfalcon_12342:HG2_PB_assemblyticsfalcon_12500:HG2_PB_assemblyticsPBcR_12118:HG3_PB_SVrefine2Falcon1Dovetail_11231:HG4_PB_SVrefine2Falcon1Dovetail_11256:HG2_PB_SVrefine2PBcRplusDovetail_5221:HG2_PB_SVrefine2Falcon2Bionano_8890:HG2_PB_SVrefine2Falcon1plusDovetail_5669:HG2_PB_SVrefine2PB10Xhap12_13197:HG4_PB_SVrefine2PBcRDovetail_9082:HG3_PB_SVrefine2PBcRDovetail_8836:HG4_PB_HySA_26254:HG4_Ill_SVrefine2DISCOVARDovetail_12570:HG3_Ill_SVrefine2DISCOVARDovetail_12788:HG2_Ill_SVrefine2DISCOVARplusDovetail_6038:HG4_PB_pbsv_18027:HG3_PB_pbsv_17787:HG2_PB_PB10Xdip_15159:HG4_Ill_GATKHC_28437:HG4_Ill_GATKHCSBGrefine_12212:HG2_Ill_GATKHC_28432:HG2_Ill_GATKHCSBGrefine_11826:HG2_Ill_250bpfermikitraw_23691:HG3_Ill_GATKHCSBGrefine_11707:HG2_PB_pbsv_18102:HG2_PB_HySA_32851:HG4_Ill_MetaSV_2384:HG2_Ill_MetaSV_2312;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23691:HG2_Ill_GATKHCSBGrefine_11826:HG2_Ill_GATKHC_28432:HG4_Ill_GATKHCSBGrefine_12212:HG4_Ill_GATKHC_28437;NumExactMatchSVs=5;ClusterMaxShiftDist=0.161616;ClusterMaxSizeDiff=0.141414;ClusterMaxEditDist=0.282723;PBcalls=18;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=93;DistBack=2801;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=65;REFWIDENED=19:34251170-34251234;PctSeqSimilarity=0.94;PctSizeSimilarity=0.8857;PctRecOverlap=0.8857;SizeDiff=-12;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=90;MatchId=2598.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:2:31:1:21:1/1:0:11:0:11:1/1:0:29:./.:.:.:.:.:.
chr19	34737048	HG2_Ill_SVrefine2DISCOVARplusDovetail_6042	T	TGAGGCTGAGGTAGGAGGATTGCTTGAGCCCAGGAGTTTGAGGCCAGCTGGGACAAAACAGTGAGACCCCGTCGCTACAAAAAAATTAAAAATTAGCTGGTCATGGTGATGCATGCCTATAGTCTTAACTACTTGGGAGGCTGAGACAGAATCGCTTGAGCCCAGGAGTTCAAGGCTATGTTTGTGCCACTGCACTCTAGCCTGAGCAACCCAGTGAGACCCTGTCTCTAAAAAAAATAAAATACTTTTAAAAAGTGGTAACTTCTGGCCCTGCATAGTGGCTCACACCTGTAATCACAGCACTTTGGGAGGCCAAGGTGGGCAGATCACCTGAGGTCAGGATTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATCCAAAAAGTAGCCAGGCGTGGTGGCATGCTCCTGTAGTCCCAGGAGTACTTATCAATCAAATATACGAAAAAAAATTTGCTTTACACAAAATAAATGAATCTCACAGACATCAAGATGAGTGAAAGAATCCCAAGCGGTTGGGATTACCACAGGTGTGAGTCACTGTGCCCAGCCTCTCTCTCTCTCCTTTTTGTTTTTTTTGTTTGTTTGTTTGCTTTTTTGAGATGGAGTCTCATTCTGTCACCCAGGCTGGTGTGCAGTGGCACCATCTTGGCTCACTACAAGCTCCGCCTCCCGGGTTCACGCCATTCTCTCACCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCTCAGCTAATTTTTCGTATTTTTAGTAGAGATGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGATCTTGTGTTCCGCCCACCTTGGCCTCCCAAAGTGGTGGGATTACAGGCGTGAGCCACCGTGCCCCACCCTTTTTTTTTTTTTTTTGAGACGGAGTTTTGGTCTTGTTGCCCAGGATGGAGTGCAATGGTGAGATCTTGGCTCATTGCAACCTCCGTCTCCTGAGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCAGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTTTCACCACATTGCCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCTGCCTCGACCTCCGAAAGCCTCTCTCTATATTTTTAAAGCCACCTGGCTCCCTTTCAATAAACCCAATCTTGGTGATTTTTTTTTTTTCTAGAGACAGAGTCTCACTCTGTCACCCAGGTTGGAGTGCAGTGGTGCGGTCATGGCTCACTACAGCCTCCACTCCCTAAGCTCAAGCCATCCTCCTGCGTCAGCCTCCCGAGCTAGGATCACAGGTGCGTGTCACCATGTCTGGCTAATTTACTTTTTAATTTTGTAGAGACACGGTCTCACTATGTTGCCCAGGCTGTCCTTGGCGATTCTTATAAGTATTGGTTGGTAGGAAGCTCAAAGGTGGCTGCAAGTTTCACCAGCTCCCTGGGGTATCCTGATGGCTATCTCAGAACTGAATGGTGTCAGACAGACTCGTTAGTTGCAGCGTAGATGATCATGGTTCATTATTTTGCACTTTAACAGCAATGTTTCATGATAGTGAAATAATTGTAGGTTAAGAGCCAAATTTTAGTTTATAAACTTAGTGTTTCCCTACATATTTTTTGTAACTTGGCTTAAAAATGTTATATGGGGACCAGGCGTAGTGGCTGGGCTAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCAGGCATGGTGGCGGGCAACTATAGTCCTAGCTACTCGTGAGGCTGAGGCAGGAGAATGGTGTGAACCCTGGAGGCGGAGCTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAGCTGGGTGCAGTGGTAGTCCCAGATACTCGGGAAGCTGAGTCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAATGAGCCGATATCATGCCACTACACTCCAGCCTAGGCAACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAGTTATATGGGGTAGGGCATGGTGGCTCATACCTGTAATCTCAGCACTTTGGGAGTTTAAGGCAGGAGGGTCACTTGAGCCCAGGAGTTTGCGACCAACCTGGGCAACACAGCGAAACCTCATCTCTACAAAAAATTAAAAAATTAGCCAGGCATGGCAATGTGCACCTGTAGTCCCAGCTACTTTGGAAGGTGAGGTGAGAAGATTACTTGAGCCCAGGAGGTTGAGGCTGCAGTGAGCCATAATCATTCCAGCCTGGGCGACAAAGGAAGACCCTGTCTCTCAAAATAATAATAAATGTTGGCCGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATCGAGACCGTCCTGGCTAACACAGTGAAACCCCGTTTCTACTAAAAATACCAAAATTAGCCGGGCGTGGTTGCAGGCGCCTGTAATCCCAGTTACTCAGGAGGCTGAGGCAGGAGAATGGCCTGAACCCAGGAGGTGGAGCTCGCAGTGAGCCGAGATCATGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAGAAAGAAAAATAATAAATGTGATATGGTTCTGCTCAGCTTTGCCCCTAAATGGAAGGCATGAGTGCTCGGCAGCTGTGTAGGTGAGGGTTAAGGTGGGACATGGCAGGCAGTGAGAGAAGATTAGGAGTTTGGACCCTGAGCTGATCTCTCCCTGTGGAGTGAATGGGGAAGAGAGACTCCTTTCACTGCACACCACTCACACACTGCTCCCTGACCCGGCCAGGAAGCATGTCCCTGCCTTCCACACGGAGGCAGCCAGCCATCTCATGAACAGGAGTCTGTTGTGCGTGGTCTTGCCATCCAGCACCTACACTGAACATGAGCTGAGTGGGTGTCCCAGGCCTCCCTGGGAGGGAATCCAGGCTGCAGCCAGTTCCTCAGGTTGCACAAGTGTTTGGTCACATTGCCACCAGAAACTCAGCCAGTGGCAGCTTTACAATCTCTGTCTGCTAGTGATTGAAGATTCAGTTGAGGCCGTGCACAGTGGCTCACGCCTGTAATGCCAGCACTTTGGGAAGCCAAGGCAGGTGGACCATTTGAGGTCAGGAGTTTCAGATCAGCCGGGTGAATATGATGAAACCTCATCTCTACTGAAAATACACAAAAATTAGCCAGACGTGGTGGCACGAGCCTGTAATCCCAGCTACACGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGCAGAGCCGAGATCATGCCACTGCACTCCAGCCTGGGAGACAGAGCAAGACTCTGTCTTAAAAAAAAAAAAAAAAAAGGAAGAAGAAGATGATGATTCAGGCTGGGTGCTGTGGCTCACGCCTGCAATCCCAACACTTTGGGAGGCCGAGGTGGGCATATCGCCTGAGGTGAGGAGTTCGAGAGCAGCCAGGCCAGCATGGTGAAACTCTGTCTCTACTAAAAATACAGAAAAAAATTTCCAGGCATGGTCGTGGGTGCCTGTAATTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGACCCTGGGAGGTGAAGGTTGCAGTGAGCCAAGACTGCACCACTGCACTCTAGACTGGGTAACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAACAAGAAGAACAAGAAGATTCAGTTGAGATGTGCAGACTGGTAGGAGCTATCACATATAAAAAATATCTGCCAGGTGCGGTGGCTCATGCCTCTAATCTCAGCACTTTGGGAGGCCAAGATGGGCAGATCACTTGTGGTCAGGAATTCAAGACCAGCCTGCTGGCCAACATGGTGAAACCCTGTACTAAGTACAAAAATTAGCTGGGTGTGGTGGTGGGTGCCTGTAATCCCAGCTACTCGCAAGGCTGAGGCAGGAGAATCGCTTGAACCTGAAAGGCAGAGGTTGCAATAAGATGAGATCACTGCACTCCAGCCTTGGTGACACAGCAAGACTCCATCTCAAAAAATAAGAATAAAAATAAGTAAATAAATAAAATAAAAACATCTCTGATTGGAACCATGTAGCAACTTCAGAGCTGGCTTGGAGGACTCTGGCACTGTGTGGAAGGAATGAAGACTCAACACGTTAGGTCCTCCTTCCCACTGTGCCTGGAGGGAGCCGATAAGCTGCAGGCTGGTTGGCTGGCTGGCTGGCTGTGAGCTCCTTCCAGGCATCAGGATCGCTGCCAAGGACAGCCATTCTGACAGCCACAGTGCCCTTTTTGTTAGGGCTAATAAATTCCCTCTTGTTTTAGTGACAAGGAGTTGGGGTTATTACATTTTGATAACCAAAGGAAAGTCCACTCACATGGGAAAAGGGGACAGAGTTCTAGTTTCTTCAACCGGATGGAGCCAAGAAGATTTCTCACGCCCCTTAGCCCTGGCCCCTGATGGGTTTAAGAATCTGAGGGGATGCTCATAAGTTTCACTGTTCAGAACCCCTCCAAAACATGTTCAACCTAGGCCGGGTACAATGGCTCATGCCTATAATCCCAGAACTTGCAGAGGCCGAGGCAGGCAGGTCACTTGAGGTCAGGAGTTCAAGGCCAGCCTGGCCAACATGGTGAAACCCCCATCTCTACTAAAAATACAAAAAGTAGCCAGGCATGGTGGCGTGCGCCTGTAGTCCCAGCTACTCAGGAGCCTGAGGCACAAGAATTGCTTGAACCTGGGAGTCGGAGGTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAATGTGTTCAACCTTTTTTTTTTTCTGAGGCAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACCTCCCAGGCTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATAACAGGCGTGCACAACCACGCCTGGCTAATTTTTTTTGTATTTTTAGTAGAGACAGAGTTTCACCATGTTGGCCAGGCTGATCTCAAACTCCTGACGTCAAGTGATTCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCATGCCTGGCTCGACCTCAAATTCTTTACAAGGCCACAGAATTGACTCTACACACTATCCTCTAACAATTCCTGGGAGACACATCTCGTCGGACTAGAGCCTCAATGCGGGCCTTCTGAATGGAGGTGGGACCTGTGGCCAGGTCCACGTATGGGGATCTGGGAAGGACGGGACCTTTGCTCTGTCAGCTGTGGAATGGACAAGAGCTACCCTTGACTTTCAGTATAGCACTTGAGCCCAGGAGGTCCAGGCTGCAGTAAGCCATGATTGCAGGACTATACTCCAGCATGGGTGACACAGTGAGACCCCGTCTCTAAAAAAAATGACTCCAAGGCCACAGTCCTATGGCTCCACCAACACTAGAACTGTGCCTAGGGTCCCTCCCCAACACACCTGTCCTTCCTTTCCTGGTTATAAGAGCCCTTAGACTCCCTGGGAGTTTGTAGGACCTAGAAAATCTCCCTTCCGCTAGGCACGGCGGCTCACACCTGTAGCCCAGCACAAGGCGGGAGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAGGGAGACCCTGTCTTTACAAAATAAACATAAAAAAATAGCCGGGCATGGTGGTGCATGCCGGTAGTCCCAGCTATGGGAGGCTGAGGTGGGAGGATCACTTGAGCCAGGGAGATTGAGGCTGCAGTGAGCTGAGATCAGGCCACTGCACTCCAGCCTGGGCAACAGAGCAATACCCTGTCTCACAAAAAAAGAAAGAAAGAAGGAAAAAGAAAAAGAAAACCTCCCCACCGTGCAGACCGCAGATCTTCACAGCTAGTAACTGGTGGGTGTAGTCTCTAGGTGGCCCCTAGTCCCTTGAGTAGCTCACCCTCCACAAACACACACACACACACACATCTAGACACTGTCGCTTCACCAAGCCTTCGAGAGCCCTCAGGAAGCCCTGCAGCAGCTCCTCCTACCTGTACCTTAGGTTTCTCTGTCTCCACACCACCCCAGCAGCCTGTTACTCAGGACCTTGCAGACGGTAAAATCAACAACGTGGTACCAGACCTCCTGTCCTGGCTGCAGTGGAAGGGGCCTGGACTCCTGGGGTCCAGTCTACCCATCAGAGATCTCCCAGGCTCCTGGCCAGCCCCAGACCACGAGGACAATGCAAGGTGACCATAGCTTACTGCAGCCTCAACCTCCTGGGCTCAACGCACCCCACCGTATAGGCGGTGTGAGATAAAAGCAGATTATTCTGCCTGACAAGGGCCTCTTGGCCACAGCACAGCTGTTTCCAGCCAGTGGGGGCTGGGGCAGAGAGGGCACAACAAGGTCCTCACAGAGTTACGCACAGGGGAGAGAAGGGGAGGGGAACTTCTTCAGGGAAGCAGTCTGGAGACTGAGGGGGAGGGGTCCCCTTCCACACTTAACCCATGCTGTCCTCAGCCCTATTCTTCCTGGGCTATGCCACCTAAGCCACTGGCCTGGCCTCACCCCAGACTCTCTATAACCAGCAGATGCAGCCAGTTGGCTCTGTGCCCAAAATGTCTAGCCAGCCCTCTTCAGACCTGGAATGCAGCTACCCTTCCTGGGGCTCACCGCCCATCTCACAGCTTTCACATCCTGCCCGAGGGAGACCAGGAAGGTAAAATAGAAAAGTTACTCTTGGCCAGGTAAGGTGGCTCACATCTGTAATCTTGGCACTTTGGGAGGCTGAGGTGGGAGGATCACCTGAGGCTAGGAGTTGAAGACCAACCTGGGCAACAAAGTGAGACTCCATCTCTACAAAAAGTTTCAAAAATTAGCTAGTCATGGTGGCACCCACTTGTAGTCCCAGTTACTGGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5671:HG4_PB_pbsv_18031:HG2_PB_pbsv_18105:HG2_Ill_breakscan11_4850:HG2_PB_PB10Xdip_15163:HG4_PB_assemblyticsfalcon_12347:HG4_PB_SVrefine2Falcon1Dovetail_11258:HG3_PB_assemblyticsfalcon_12541:HG2_PB_assemblyticsPBcR_12125:HG2_PB_assemblyticsfalcon_12507:HG3_PB_SVrefine2Falcon1Dovetail_11232:HG3_Ill_SVrefine2DISCOVARDovetail_12790:HG4_Ill_SVrefine2DISCOVARDovetail_12575:HG2_PB_SVrefine2PBcRplusDovetail_5224:HG2_PB_SVrefine2PB10Xhap12_13201:HG2_Ill_SVrefine2DISCOVARplusDovetail_6042:HG2_PB_SVrefine2Falcon2Bionano_8893:HG3_PB_SVrefine2PBcRDovetail_8837:HG4_PB_SVrefine2PBcRDovetail_9085;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6042:HG2_PB_SVrefine2PB10Xhap12_13201:HG2_PB_SVrefine2PBcRplusDovetail_5224;NumExactMatchSVs=3;ClusterMaxShiftDist=0.039801;ClusterMaxSizeDiff=0.039801;ClusterMaxEditDist=0.164648;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=7175;DistBack=45624;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=37;REFWIDENED=19:34737049-34737085;PctSeqSimilarity=0.9999;PctSizeSimilarity=1;PctRecOverlap=0.9985;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=99;MatchId=2600.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:84:./.:0:3:2:12:./.:1:0:0:11:1/1:0:28:1/1:0:845:.:7241:.
chr19	35413913	HG4_Ill_Krunchall_24399	A	AGGGAGAGGGAGACCGTGGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGATGGGAGAGGGAGAGGGAGAT	20	PASS	ClusterIDs=HG2_PB_pbsv_18107:HG4_PB_pbsv_18032:HG2_PB_assemblyticsPBcR_12133:HG4_PB_HySA_26265:HG2_PB_PB10Xdip_15175:HG2_PB_HySA_32865:HG3_PB_HySA_27179:HG4_Ill_svaba_22184:HG4_Ill_Krunchall_24399:HG4_Ill_GATKHCSBGrefine_12217:HG4_Ill_250bpfermikitraw_23359:HG3_Ill_svaba_22418:HG3_Ill_GATKHC_28349:HG3_Ill_GATKHCSBGrefine_11710:HG2_PB_SVrefine2PBcRplusDovetail_5226:HG2_PB_SVrefine2PB10Xhap12_13203:HG2_PB_SVrefine2Falcon2Bionano_8895:HG2_Ill_svaba_22205:HG2_Ill_GATKHC_28448:HG2_Ill_GATKHCSBGrefine_11830:HG2_Ill_250bpfermikitraw_23699:HG2_10X_SVrefine210Xhap12_12590:HG2_Ill_Krunchall_24037:HG3_PB_pbsv_17791:HG4_PB_SVrefine2PBcRDovetail_9086:HG3_PB_SVrefine2PBcRDovetail_8839:HG2_PB_SVrefine2Falcon1plusDovetail_5673:HG2_10X_SVrefine210Xhap12_12589:HG3_PB_SVrefine2Falcon1Dovetail_11234:HG4_PB_SVrefine2Falcon1Dovetail_11260;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12590:HG2_Ill_250bpfermikitraw_23699:HG2_Ill_GATKHCSBGrefine_11830:HG2_Ill_GATKHC_28448:HG2_Ill_svaba_22205:HG2_PB_SVrefine2Falcon2Bionano_8895:HG2_PB_SVrefine2PB10Xhap12_13203:HG2_PB_SVrefine2PBcRplusDovetail_5226:HG3_Ill_GATKHCSBGrefine_11710:HG3_Ill_GATKHC_28349:HG3_Ill_svaba_22418:HG4_Ill_250bpfermikitraw_23359:HG4_Ill_GATKHCSBGrefine_12217:HG4_Ill_Krunchall_24399:HG4_Ill_svaba_22184;NumExactMatchSVs=15;ClusterMaxShiftDist=0.102273;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.220994;PBcalls=16;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=87;DistBack=-30;DistForward=-1;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=19:35413910-35413944;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:12:0:5:1/1:0:7:1:7:1/1:0:23:./.:.:.:.:.:.
chr19	35607683	HG2_Ill_GATKHC_28450	C	CAGGCATTGAGGGATCTGGGTGGATAAGGAGTGCTGGGTGGACTCGGGGTGTCT	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_12581:HG2_PB_pbsv_18110:HG4_PB_pbsv_18034:HG3_PB_pbsv_17794:HG2_PB_HySA_32868:HG3_PB_HySA_27187:HG4_Ill_250bpfermikitraw_23361:HG3_Ill_250bpfermikitraw_23032:HG2_PB_assemblyticsfalcon_12518:HG2_Ill_manta_4812:HG2_Ill_Krunchall_24039:HG2_Ill_GATKHC_28450:HG2_Ill_GATKHCSBGrefine_11831:HG2_Ill_250bpfermikitraw_23701:HG2_Ill_150bpfermikitraw_22322:HG4_Ill_Krunchall_24401:HG4_Ill_GATKHC_28451:HG4_Ill_GATKHCSBGrefine_12218:HG3_Ill_Krunchall_23626:HG3_Ill_GATKHC_28352:HG3_Ill_GATKHCSBGrefine_11711:HG4_PB_HySA_26269:HG3_PB_HySA_27186:HG3_PB_assemblyticsfalcon_12549:HG2_PB_PB10Xdip_15178:HG4_PB_assemblyticsfalcon_12354:HG3_PB_SVrefine2PBcRDovetail_8841:HG3_Ill_SVrefine2DISCOVARDovetail_12794:HG2_PB_SVrefine2PBcRplusDovetail_5228:HG2_PB_SVrefine2PB10Xhap12_13205:HG2_PB_SVrefine2Falcon2Bionano_8897:HG2_PB_SVrefine2Falcon1plusDovetail_5676:HG2_Ill_SVrefine2DISCOVARplusDovetail_6047:HG2_10X_SVrefine210Xhap12_12593:HG4_PB_SVrefine2PBcRDovetail_9087;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22322:HG2_Ill_250bpfermikitraw_23701:HG2_Ill_GATKHCSBGrefine_11831:HG2_Ill_GATKHC_28450:HG2_Ill_Krunchall_24039:HG2_Ill_manta_4812:HG2_PB_assemblyticsfalcon_12518:HG3_Ill_250bpfermikitraw_23032:HG4_Ill_250bpfermikitraw_23361;NumExactMatchSVs=9;ClusterMaxShiftDist=0.12844;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.234234;PBcalls=17;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=53;DistBack=-54;DistForward=984;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=112;REFWIDENED=19:35607643-35607754;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2602.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:2:28:0:27:./.:4:14:5:11:./.:3:40:./.:.:.:.:.:.
chr19	36018002	HG2_PB_SVrefine2Falcon1plusDovetail_5678	G	GGCAGCATGGTGGACACCCTGGCCAAACTTCTCTGCTTCCTTCCAGGCCTCATTAACCCCATGGTGGACCCCATGGCCGAGCTTCTCTGTTTCCTTCCCAAACTGACTGGCAGCATGGTGGACCCCCTGGCCAAACTTCTCTGTCTCCTTCCAGCCCTCACTGAGACCATGGTGGACCCCCTGGCCAAACCTCCCAGCCTCATTTCCGGCCTGCCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5678:HG2_PB_PB10Xdip_15182:HG4_PB_HySA_26272:HG4_PB_pbsv_18036:HG2_PB_SVrefine2PBcRplusDovetail_5231:HG2_PB_SVrefine2PB10Xhap12_13208;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5678:HG2_PB_SVrefine2PBcRplusDovetail_5231:HG2_PB_SVrefine2PB10Xhap12_13208;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0818182;ClusterMaxSizeDiff=0.0818182;ClusterMaxEditDist=0.210762;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=216;DistBack=6730;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=750;REFWIDENED=19:36018003-36018752;PctSeqSimilarity=0.9591;PctSizeSimilarity=1;PctRecOverlap=0.4793;SizeDiff=0;StartDistance=-113;EndDistance=-113;GTMatch=0;TruScore=81;MatchId=2603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:34:./.:20:8:5:18:./.:3:0:3:2:0/0:12:0:./.:.:.:.:.:.
chr19	36179910	HG2_PB_SVrefine2PB10Xhap12_13209	G	GTTTTTTTCCTTTATTATTATTATTTATTTTTTGAGATGGAGCCTTGCACTGTTGCCCAGACTGGAGTGCAGTAGTGCCATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTTAGCCTCCCAAGTAGTTGGGATTACAGGCACCCGCCACCACGCCCAGCTAAGTTTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGTTCAAGCTGGTCTCAAACTCCTGACCTCATGATCCACCCACCTTGTTCTCCCAAAGTGCTGGGATTAAAGGCATGAGCCACCACACCTAGCCTATTATATATATATATATATATATA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11263:HG3_PB_HySA_27194:HG2_PB_pbsv_18115:HG3_Ill_manta_3940:HG2_PB_PB10Xdip_15183:HG4_Ill_MetaSV_2387:HG3_Ill_MetaSV_2467:HG4_PB_HySA_26274:HG4_PB_pbsv_18037:HG3_PB_pbsv_17799:HG2_PB_SVrefine2PBcRplusDovetail_5232:HG3_PB_SVrefine2Falcon1Dovetail_11237:HG2_PB_SVrefine2Falcon2Bionano_8900:HG2_PB_SVrefine2Falcon1plusDovetail_5679:HG3_PB_SVrefine2PBcRDovetail_8844:HG4_PB_SVrefine2PBcRDovetail_9088:HG2_PB_SVrefine2PB10Xhap12_13209;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13209:HG4_PB_SVrefine2PBcRDovetail_9088;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0638607;ClusterMaxSizeDiff=0.0609579;ClusterMaxEditDist=0.218659;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=338;DistBack=969;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=303;REFWIDENED=19:36179911-36180213;PctSeqSimilarity=0.9634;PctSizeSimilarity=0.9941;PctRecOverlap=0.2317;SizeDiff=-2;StartDistance=-261;EndDistance=-261;GTMatch=0;TruScore=72;MatchId=2604.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:1:20:2:27:1/1:0:6:0:6:1/1:0:10:./.:2:18:.:.:.
chr19	36326901	HG2_PB_SVrefine2PB10Xhap12_13210	G	GCCCAGGCTGGAGTGCAGTGGCGCAATCTCAGCTCACTGAAACCTCTGCCTCCCGGGTTCAAGCAATTCTCATGCTTCAGCCTCCTGAGTAGCTGGGATTACAGACGTGAGCCACCACACCCGTCTAATTTTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTCACCAGGCTGGTGTCAAACTCCTGACCTCAAGTAAGGACACCTTTTTACTTGAGGCTCACACCTGTAATCCCAGCTACTTGGAAGGCTAAGGCAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCGGTGAGCTGAGATTGTACCACTGTACTCCAGCCCAGTTGACAGAGCAAGACTCCGTCCACCTGCCTCAGCCTCCCAAAGTGCTGGGTTTACAGGCCTGAGCCACTGCACCCGGGCAATTTTTTTTTTCCCCAAGACGGAGTCTTGCTCTGTCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11238:HG4_PB_pbsv_18038:HG3_PB_pbsv_17800:HG2_PB_pbsv_18116:HG2_PB_HySA_32873:HG3_PB_HySA_27195:HG3_Ill_MetaSV_2468:HG4_Ill_manta_4085:HG4_Ill_GATKHCSBGrefine_12219:HG3_Ill_GATKHCSBGrefine_11712:HG2_Ill_MetaSV_2315:HG2_PB_PB10Xdip_15184:HG4_Ill_MetaSV_2388:HG4_PB_HySA_26275:HG4_PB_SVrefine2Falcon1Dovetail_11264:HG2_PB_SVrefine2Falcon1plusDovetail_5680:HG4_PB_SVrefine2PBcRDovetail_9089:HG3_PB_SVrefine2PBcRDovetail_8845:HG3_Ill_SVrefine2DISCOVARDovetail_12798:HG4_Ill_SVrefine2DISCOVARDovetail_12584:HG2_PB_SVrefine2PBcRplusDovetail_5233:HG2_PB_SVrefine2PB10Xhap12_13210:HG2_PB_SVrefine2Falcon2Bionano_8901:HG2_Ill_SVrefine2DISCOVARplusDovetail_6053:HG2_10X_SVrefine210Xhap12_12602;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12602:HG2_Ill_SVrefine2DISCOVARplusDovetail_6053:HG2_PB_SVrefine2Falcon2Bionano_8901:HG2_PB_SVrefine2PB10Xhap12_13210:HG2_PB_SVrefine2PBcRplusDovetail_5233;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0482986;ClusterMaxSizeDiff=0.0461032;ClusterMaxEditDist=0.171553;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=446;DistBack=146688;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=195;REFWIDENED=19:36326902-36327096;PctSeqSimilarity=0.994;PctSizeSimilarity=1;PctRecOverlap=0.8792;SizeDiff=0;StartDistance=-54;EndDistance=-54;GTMatch=0;TruScore=95;MatchId=2605.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:1/1:1:36:1:13:./.:1:6:0:9:1/1:0:23:1/1:4:77:.:.:.
chr19	36670146	HG4_Ill_SVrefine2DISCOVARDovetail_12589	T	TTATGCAAATTAAAAATCACCAACTATATACAAGAACTTGGTGTTAGTGATTGTTCCATAAAAGGTAATG	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_12361:HG4_PB_pbsv_18041:HG4_PB_HySA_26279:HG2_PB_pbsv_18119:HG2_PB_PB10Xdip_15185:HG3_PB_assemblyticsfalcon_12557:HG4_PB_SVrefine2PBcRDovetail_9092:HG4_Ill_SVrefine2DISCOVARDovetail_12589:HG4_Ill_Krunchall_24410:HG4_Ill_250bpfermikitraw_23369:HG3_Ill_SVrefine2DISCOVARDovetail_12802:HG3_Ill_Krunchall_23634:HG2_PB_SVrefine2PBcRplusDovetail_5236:HG2_PB_SVrefine2PB10Xhap12_13213:HG2_PB_SVrefine2Falcon2Bionano_8904:HG2_PB_SVrefine2Falcon1plusDovetail_5683:HG2_Ill_SVrefine2DISCOVARplusDovetail_6056:HG2_Ill_250bpfermikitraw_23707;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23707:HG2_Ill_SVrefine2DISCOVARplusDovetail_6056:HG2_PB_SVrefine2Falcon1plusDovetail_5683:HG2_PB_SVrefine2Falcon2Bionano_8904:HG2_PB_SVrefine2PB10Xhap12_13213:HG2_PB_SVrefine2PBcRplusDovetail_5236:HG3_Ill_Krunchall_23634:HG3_Ill_SVrefine2DISCOVARDovetail_12802:HG4_Ill_250bpfermikitraw_23369:HG4_Ill_Krunchall_24410:HG4_Ill_SVrefine2DISCOVARDovetail_12589:HG4_PB_SVrefine2PBcRDovetail_9092;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.180556;PBcalls=11;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=2213;DistForward=132;DistMin=132;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=138;REFWIDENED=19:36670147-36670284;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2606.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:39:1/1:4:21:2:13:./.:8:12:11:12:0/1:12:39:./.:.:.:.:.:.
chr19	36686588	HG3_PB_HySA_27200	A	AGGCGATGTGCCACCACACCTGGCTCATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCATCCGTCTCGGCCTCCCAAAGTGCTGGATTACAGGCATGAGCCACCACGCTCTGCTGTTCTTTTTTTTTTTTTTGAGACCAAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGTGGAGTACAGTGGTACGTGGAGTGCAGTGCAGTGCAGCAGAATGGAGTGCAGTGGCTCACTGCCAACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGTTACAGGCGCCCGCTTACCACGCCAGCAAATGTTTTTTGTATTTTTTAGTAGAGACAAGGTTCCTCCATGTTGGCCAGGCTGGTCTCAAACTCTTGGCCTCAAGTGATCTGCCTGACTTGCCTCCCAAAGTGTTGGATTATAAGCATGACCACTGCACCTGGCCTCAATTTTTTTTTTTAAGACCAGTCACCCAGGCTGGAGTACAGTGGTCTGTTCATGGCTCACTGCAGCCTCGACCTCAGCTCAAGCAATCCTCCCATCTCAGCCTCCCAAGTAAACTGGGACCCACAGTGTGCGTGCGCCACCATGCCCAGCTAATCTTTATATTATTTGTAGAGAGGGGGGTCTCACTATGTTGCCCAGGCTGGTCTTGAGTTCCTGGGCTCAAGCGATCCTTCCACCTGGGCCTCCCAAAGTGCTGGTATTACAGGCATAAGCCACTGTGCCCAGCAGTGATTTTTTCTAAATTAACAAATTTCAGTACTTACCAAAAGTGATTTTTTTTTTTTGAGACGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCGATCTTGGGTCACTGCAACCTCTGCCTCCCCGGGTTCAAGTGATTCTCCTGCCTCAAACTCCAAGTAGCTGGGATTACAGGCACCCGCCACCACACTCAGCTAATTTTTTTTGTACTTTAGTAGAGATGGGGTTTCTCTGAGGCAGGCGGATCGGATCACCTGAGGTCGGGAGTTTGAGATCAGCCTGACCACCATGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCAGGTGTGGTGGTGCATGCCTGTAATCCCAGCTACTCAAGAGGCTGAGGGAGGAGAAATCGCTTGAACCTGGGGAGGCGGAGGCAGAGGCTTCAGTAAAGCTGAGATCACGACATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAAAAGAAACATGATTGTGAATTAGCAGAGTTCCTGCCTTCTGGAATTTGGTGGATTGCAACTTTGTGGTATAGTTTCACAGGTGCTTTATTTCCATATTCCCTGTGAAATAGTAGTTAGATCTGGGGGTCTGAATTCCATTTTTGTGAGGGAAGGGCATTAACATGTCAGGGATGGTGATGTGTATTTCCTGTAGCATCCCATTAGGAGGCACAATAATGATGGATGCCCCCGCCCACCTTTTTTTTTTTTTTTTTTAGAGACGGTCTCACTCTGTCACCCAGGCTGGAGTGTAGGTGGCACAATCGGCGGCTCACTGAGCCTTGACCTCCCAGCTCAAGCTTATCCCCCTGCCTCAGCCTCCCAAGTAGCTGGCACTAAAGGTGTGTGCACCACCACACCCAGCTATTTTTTTTATTTTTTGTAGAGATGGGGTCTCACTATGTTTGTCCAGGCTGGTTCTTGAATTCCCGGACTTCAGTGATCCACCACCTCGACCTACCAAAGCGCTGGGATTATAGGTGTGGGCCACTGTGGCCTGGCCCTATTTTTTTAAGACACAGAGTCTTAACTCTGCCACCCAGGCTGGAGTGCAGTGGTGCAATCATGGCTCACTGCTGCCTCCAAATTCCTGAGCTCAAGCAATCCCCCACCTCAGCTTCCCAAGTGACTGGGACTACAGGCACATGTCACCATACTAAGCTATTTTTTTTTTATTGTTTTTTGTAGAGGTGGGGGTCTTGCCTGTATTGTCCAGGCTGGTCTCAAACTTCTAGCTCAAGCAATCCTCCCACCTTGGCCTTCAAAGCGCTGGATTAAAGGTTGAGCCACAGTGCCTGTCTTGTCCTATTTTGTTTGTTCTGTTTTTGTTTTGTTTTGTTTTTTGAGATGGAGTCTCTGTTGCCCAGGCCCGAGTTGCAGTGGCATGATTTCAGCTCACTGCAACCTCTGTCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCAAGTAGCTGGGATTACAGGTGCATGCCACCACGCCCGGCTAATTTTTTTATTTTTTTATTTTTTTGAGATGGAGTCTCACTTTGTCGCCCAGGCTGGAGTGCAGTGGCATAATCTCGGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCTTCCCGAGTAACTGGGATTACAGGTGCATGCCACCACTCCTGGCTAATTTTTGTATTTTTAGTGGAGACAAGGTTTCACCACATTGACCAGGCTGGTCTTGAACCACCTGACCTCAGGTGATCTACCTGCCTCAGTCTCCTAAGGTGCTGGGGATTACAGGCAATGAGCCACCATGCCTGGCCTAATTTTTGTATTTTTAATAGAGAAGGGGTTTTACCCATGTTTGGCCAGGCTGGTTGTGAACTCCTGACCTCAAGGGATTGGCCCCCCTCGGCCTCCCACAGTGCTGGGATTACTGGCGTGAGCCACTGTTGCTTGGCCACCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCTCAGCTTACTGCAATCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAATTACGTTGGACCATAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5237:HG2_PB_pbsv_18120:HG3_PB_HySA_27200:HG2_PB_HySA_32876:HG3_PB_pbsv_17804:HG3_PB_HySA_27199:HG2_PB_PB10Xdip_15186:HG2_PB_SVrefine2Falcon1plusDovetail_5684:HG4_PB_SVrefine2Falcon1Dovetail_11267:HG2_PB_SVrefine2PB10Xhap12_13214:HG3_PB_SVrefine2PBcRDovetail_8848:HG3_PB_SVrefine2Falcon1Dovetail_11241:HG3_Ill_SVrefine2DISCOVARDovetail_12804:HG2_Ill_SVrefine2DISCOVARplusDovetail_6057:HG4_Ill_SVrefine2DISCOVARDovetail_12590:HG2_PB_SVrefine2Falcon2Bionano_8905;NumClusterSVs=16;ExactMatchIDs=HG3_PB_HySA_27200;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0704037;ClusterMaxSizeDiff=0.0700701;ClusterMaxEditDist=0.18871;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=2948;DistBack=37;DistForward=24616;DistMin=37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=296;REFWIDENED=19:36686437-36686732;PctSeqSimilarity=0.9818;PctSizeSimilarity=0.9868;PctRecOverlap=0.9803;SizeDiff=39;StartDistance=38;EndDistance=38;GTMatch=0;TruScore=98;MatchId=2607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:73:1/1:1:30:0:15:./.:2:5:9:2:0/1:9:16:1/1:13:437:.:2958:.
chr19	36971534	HG2_PB_pbsv_18122	T	TGGGAAGGCCAGGGCGTGGTGGCTCACGCCTTGTAACTCCCAGCACTTTGGGCCGAGGGCCGAGGCGGGTGCGATTCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGGCGGGCGGCCTGCTGTCCCAAAGCTACTCTGGAGCTGAGGCAGGAGAATGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGGATTGCCGGCCACTGCAGTCCGCAGTCTGCGCCTGGGTGACAGACGAGACTCCGTCTCAAAAAAAAAAAAAACAGTTGC	10	PASS	ClusterIDs=HG2_PB_HySA_32879:HG4_PB_pbsv_18043:HG2_PB_pbsv_18122:HG2_PB_SVrefine2Falcon1plusDovetail_5686:HG4_PB_SVrefine2Falcon1Dovetail_11268:HG4_PB_HySA_26280;NumClusterSVs=6;ExactMatchIDs=HG2_PB_pbsv_18122;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0625978;ClusterMaxSizeDiff=0.0594679;ClusterMaxEditDist=0.148148;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=328;DistBack=-3;DistForward=6498;DistMin=-3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=19:36971535-36971535;PctSeqSimilarity=0.9562;PctSizeSimilarity=0.9512;PctRecOverlap=0.9453;SizeDiff=16;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=95;MatchId=2608.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:0|1:31:3:1:25:./.:2:10:44:0:0/1:26:10:0/1:11:18:971228:103862:.
chr19	37733006	HG2_Ill_GATKHCSBGrefine_11839	A	ATAGTATCTATATAGTATCTATACTATATATAGTATAGTATCTATATATAGTATATATAGTTTCTATACTATATAGTATATATAGTACTATAGTATCTAGATACTATATATACTATATATACTATATAAGTATACTTTTATAGTATATATAGATACTACATATAGTATCTATATCTATATATGTCTAAGATATATCATATCTATATAAGTATACTTATATAGTATATATAGATACTATAGTATACTTATATATAGATACTATAGTATACTTATATAAGTATACTTATATAGATATGTGATATATCTTAGACATATATAGATATAGATACTATATG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5689:HG2_PB_SVrefine2Falcon1plusDovetail_5690:HG2_PB_PB10Xdip_15197:HG4_PB_HySA_26288:HG2_Ill_MetaSV_2322:HG4_Ill_GATKHCSBGrefine_12227:HG2_Ill_GATKHCSBGrefine_11839:HG2_PB_pbsv_18128:HG3_PB_pbsv_17811:HG2_PB_SVrefine2PBcRplusDovetail_5242:HG2_PB_SVrefine2Falcon2Bionano_8910:HG4_PB_pbsv_18048:HG4_PB_SVrefine2Falcon1Dovetail_11271:HG2_PB_SVrefine2PB10Xhap12_13222:HG3_PB_SVrefine2Falcon1Dovetail_11245:HG2_Ill_SVrefine2DISCOVARplusDovetail_6072:HG3_PB_SVrefine2PBcRDovetail_8857;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11839:HG4_Ill_GATKHCSBGrefine_12227;NumExactMatchSVs=2;ClusterMaxShiftDist=0.225503;ClusterMaxSizeDiff=0.201342;ClusterMaxEditDist=0.303356;PBcalls=13;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=334;DistBack=1;DistForward=9656;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=204;REFWIDENED=19:37732823-37733026;PctSeqSimilarity=0.9738;PctSizeSimilarity=0.9489;PctRecOverlap=0.949;SizeDiff=-18;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=95;MatchId=2609.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:1/1:3:29:0:22:1/1:0:17:0:14:1/1:0:36:1/1:5:132:971228:103862:.
chr19	37742663	HG4_Ill_GATKHC_28469	T	TAAAAGATCTGTCTACTTCAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG4_PB_HySA_26289:HG2_PB_pbsv_18129:HG2_Ill_breakscan11_4851:HG4_PB_pbsv_18049:HG4_Ill_manta_4089:HG4_Ill_GATKHC_28469:HG4_Ill_GATKHCSBGrefine_12228:HG2_Ill_GATKHC_28474:HG2_PB_SVrefine2PB10Xhap12_13223:HG2_CG_vcfBeta_10193;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHC_28474:HG4_Ill_GATKHCSBGrefine_12228:HG4_Ill_GATKHC_28469:HG4_Ill_manta_4089;NumExactMatchSVs=4;ClusterMaxShiftDist=0.159292;ClusterMaxSizeDiff=0.159292;ClusterMaxEditDist=0.20339;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=1;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=55;DistBack=9656;DistForward=1794;DistMin=1794;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=19:37742664-37742680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2610.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:37:0|1:21:4:3:28:1|0:0:13:12:0:0/1:30:10:./.:.:.:971228:103862:.
chr19	38031443	HG2_Ill_manta_4816	T	TTAAAGCGGTTTTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTTCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4852:HG3_PB_pbsv_17812:HG4_PB_SVrefine2Falcon1Dovetail_11272:HG2_PB_PB10Xdip_15205:HG2_PB_SVrefine2PB10Xhap12_13226:HG3_PB_assemblyticsfalcon_12571:HG4_Ill_GATKHCSBGrefine_12229:HG3_Ill_MetaSV_2475:HG3_Ill_GATKHCSBGrefine_11719:HG2_Ill_manta_4816:HG2_Ill_GATKHCSBGrefine_11840:HG2_PB_HySA_32888:HG3_PB_HySA_27209;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11840:HG2_Ill_manta_4816:HG3_Ill_GATKHCSBGrefine_11719:HG3_Ill_MetaSV_2475:HG4_Ill_GATKHCSBGrefine_12229;NumExactMatchSVs=5;ClusterMaxShiftDist=0.221843;ClusterMaxSizeDiff=0.21843;ClusterMaxEditDist=0.286689;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=0;DistForward=7;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=19:38031444-38031459;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2611.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:33:1|0:6:24:19:0:0|1:21:0:0:7:0/1:23:5:0/1:9:31:.:.:.
chr19	38622284	HG2_PB_SVrefine2Falcon2Bionano_8913	G	GTTTTTTTAGATGGAGTCTCGCTCTGTCGCCCAGGCTGAAGTGCAGTGGCGTGATCTCAACTCACTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTGGCCCAGACTGGTCTTGAATTCCTGACCTCAGGTGATCTACCCGCCTCAGCCTCCCAAAGTGCTGAGCCTCCCCAGGCTGTTTGTTTCGTTTTTTAATGGAATATCTCAAACATAAAGTGTGTTACAAGTATCAAAACATATCATATGCCCCATAAATATATACGCCTACTGTGTACCCACCAAAGTTAAAAAGAAATAAAAGGAAATACCCAAGTGGGGGGAACAAAAGTATACTGAGCCCTCTGGGCACTTACCAACATGCGGCCAGCTTTTTGTTTTTTGTTTTATTATCTCCATATCCTCTTCCTGCCCCGCCTGTCATCTTAGATTATCTAAAACAATTCCAGATCCTGGAATGTGCCTCTATACAATAAAGACCTTTTTTAAAAATTACACCTAACAAATTTAACAGTAATTTCATGTATTTCTTGTTTTTGTTTGTTTTTTTGTTTTTTATTTTTTATTTTTTGAGATGGAATCTCACTCTGTTGCCCAGGCTGGAGTGCAATGGCACCATCTCGGCTCAGTGCAACCTCCACCTCCCAGTTCAAGCGATTCTCCTGCCTTAGCCTCAGCCTCCCGAGTAGCTGCAACTACAGACATGTGCCACCATGCCCAGCTAATTTTTGTAGTTTTTGGTAGAGACAGAGTTTCCCCATGTTGGCCAGGTTGGTCTCAAACTCCTGACCTCAAGTGATCCACTGTCTTGGCCTCCCAAAGTGCCAGAATTACAGGCTTGTGCCACCACACCTGGCCTTAACAGTATTTTCTTTTTCTTTCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13229:HG4_PB_pbsv_18057:HG3_PB_HySA_27215:HG2_PB_pbsv_18133:HG2_PB_PB10Xdip_15210:HG3_PB_pbsv_17816:HG2_Ill_MetaSV_2324:HG4_Ill_GATKHCSBGrefine_12231:HG3_Ill_GATKHCSBGrefine_11720:HG2_PB_HySA_32898:HG3_PB_SVrefine2PBcRDovetail_8860:HG3_Ill_SVrefine2DISCOVARDovetail_12809:HG2_PB_SVrefine2Falcon2Bionano_8913:HG3_PB_SVrefine2Falcon1Dovetail_11248:HG4_PB_SVrefine2Falcon1Dovetail_11275;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8913:HG3_Ill_SVrefine2DISCOVARDovetail_12809:HG3_PB_SVrefine2PBcRDovetail_8860;NumExactMatchSVs=3;ClusterMaxShiftDist=0.089969;ClusterMaxSizeDiff=0.0889349;ClusterMaxEditDist=0.256615;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=975;DistBack=6605;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=255;REFWIDENED=19:38622285-38622539;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=0.8615;SizeDiff=0;StartDistance=-135;EndDistance=-135;GTMatch=0;TruScore=95;MatchId=2612.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:26:0|1:19:2:0:19:./.:12:0:0:1:0/1:12:11:0/1:31:73:.:1087:.
chr19	38760434	HG2_PB_SVrefine2PB10Xhap12_13230	A	AGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11249:HG2_PB_PB10Xdip_15212:HG2_PB_pbsv_18135:HG2_PB_HySA_32901:HG2_10X_SVrefine210Xhap12_12608:HG3_PB_HySA_27217:HG4_PB_pbsv_18059:HG4_PB_HySA_26298:HG3_PB_pbsv_17818:HG4_PB_SVrefine2PBcRDovetail_9094:HG4_PB_SVrefine2Falcon1Dovetail_11276:HG4_Ill_SVrefine2DISCOVARDovetail_12597:HG3_PB_SVrefine2PBcRDovetail_8861:HG3_Ill_SVrefine2DISCOVARDovetail_12811:HG2_PB_SVrefine2PBcRplusDovetail_5245:HG2_PB_SVrefine2PB10Xhap12_13230:HG2_PB_SVrefine2Falcon2Bionano_8914:HG2_PB_SVrefine2Falcon1plusDovetail_5693:HG2_Ill_SVrefine2DISCOVARplusDovetail_6078;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6078:HG2_PB_SVrefine2Falcon1plusDovetail_5693:HG2_PB_SVrefine2Falcon2Bionano_8914:HG2_PB_SVrefine2PB10Xhap12_13230:HG2_PB_SVrefine2PBcRplusDovetail_5245:HG3_Ill_SVrefine2DISCOVARDovetail_12811:HG3_PB_SVrefine2PBcRDovetail_8861:HG4_Ill_SVrefine2DISCOVARDovetail_12597:HG4_PB_SVrefine2Falcon1Dovetail_11276:HG4_PB_SVrefine2PBcRDovetail_9094;NumExactMatchSVs=10;ClusterMaxShiftDist=0.124481;ClusterMaxSizeDiff=0.124481;ClusterMaxEditDist=0.276423;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=115;DistBack=10153;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=220;REFWIDENED=19:38760435-38760654;PctSeqSimilarity=0.9673;PctSizeSimilarity=1;PctRecOverlap=0.6783;SizeDiff=0;StartDistance=-37;EndDistance=-37;GTMatch=0;TruScore=88;MatchId=2613.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:50:1/1:3:14:0:26:./.:2:2:3:3:0/1:7:15:./.:.:.:.:.:.
chr19	39032081	HG2_Ill_SVrefine2DISCOVARplusDovetail_6082	T	TGTGGTGGCTTACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACAAGGTCAGGAGTTGGAGACCAGCCTGTCCAATATGGTGAAACCCTGTCTCTACTAAAAATGCAAAAAAATTAGCCAGGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6082:HG2_PB_PB10Xdip_15213:HG2_PB_HySA_32902:HG2_PB_pbsv_18137:HG2_PB_SVrefine2PBcRplusDovetail_5246:HG3_PB_pbsv_17819:HG2_PB_SVrefine2PB10Xhap12_13231:HG2_PB_SVrefine2Falcon2Bionano_8915:HG2_PB_SVrefine2Falcon1plusDovetail_5694;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6082:HG2_PB_SVrefine2PBcRplusDovetail_5246:HG2_PB_SVrefine2PB10Xhap12_13231:HG2_PB_SVrefine2Falcon2Bionano_8915:HG2_PB_SVrefine2Falcon1plusDovetail_5694;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0729927;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.255474;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=135;DistBack=832;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=183;REFWIDENED=19:39032082-39032264;PctSeqSimilarity=0.9966;PctSizeSimilarity=1;PctRecOverlap=0.9037;SizeDiff=0;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=96;MatchId=2614.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:0|1:15:3:5:18:0|1:8:0:0:9:0/1:20:13:./.:.:.:.:.:.
chr19	39037330	HG2_10X_SVrefine210Xhap12_12611	A	ACCTGTAATCCCAGCACTTTGGGAGGCCCAGGTGGGAAGATCACCTGAAGTCAGGAGTTTGAGACCAGCCCGGCCAACATGGTGAAAACCCATCTCTACTAAAAATACAAAAATTAGCCCGGCGTGGTAGCATGTGCCTGTAATCTCAGCTACTCAGGAGGCTGAGGGAGGAGAATTGCTTGAACCTGGGAGGCAGAAATTACAGTGAGCCGAGATCACGCCATTGCACTCCAGCCCGGGTGACAAAAGCAAAACTCCAGCTCAAAAAAAAAAAAAAAAAAAAATCAGAAGGTTCCCTTTAAACATCAAGATTTCCAGCTTTTCTTGGAAAACTGTAAGCTTCAGTGACCCTGGGTCCACATTCTCACATGGCAAAAATTCGCTGGATTAGATGAAATAACTTAATTATATCAATGTTAGATCTCTAGATGTTCATGATAGCATGGTGATTATATTAAACAATGTCCTTGTCTTTTAGGACATAGACACCGAAATGTTTAAGGGTAAAAGGACCGCATGTCTGCAACTTACTCTCAAATTGTTCAGAAAAAAAATATACAGAGAGAAAGAGAATTTTTTTTTTTTTTTGAGATGGAGTCTCGCTGTGTCGCCCAGGCTGGAGTGCAATGGCACAATCTCAGCTCACTGCAAGCTCCGCCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAATAGCTGGGACTACAGGCACCCACCACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGATTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCGAGAAAGAAAATGATAAAACAAATGTGATGCAGGGTGCGTCACGTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12611:HG3_PB_pbsv_17820:HG2_PB_pbsv_18138:HG4_PB_pbsv_18060:HG3_Ill_MetaSV_2476:HG2_Ill_MetaSV_2325:HG4_Ill_MetaSV_2399:HG4_PB_HySA_26301:HG2_PB_PB10Xdip_15214:HG4_PB_SVrefine2Falcon1Dovetail_11277:HG3_PB_SVrefine2PBcRDovetail_8862:HG3_PB_SVrefine2Falcon1Dovetail_11250:HG2_PB_SVrefine2PBcRplusDovetail_5247:HG2_PB_SVrefine2PB10Xhap12_13232:HG4_PB_SVrefine2PBcRDovetail_9095:HG4_Ill_SVrefine2DISCOVARDovetail_12599:HG3_Ill_SVrefine2DISCOVARDovetail_12813:HG2_PB_SVrefine2Falcon1plusDovetail_5695:HG2_PB_SVrefine2Falcon2Bionano_8916:HG2_Ill_SVrefine2DISCOVARplusDovetail_6083;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12611:HG2_Ill_SVrefine2DISCOVARplusDovetail_6083;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0461621;ClusterMaxSizeDiff=0.044015;ClusterMaxEditDist=0.194062;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=914;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=272;REFWIDENED=19:39037331-39037602;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9989;PctRecOverlap=0.941;SizeDiff=-1;StartDistance=-54;EndDistance=-54;GTMatch=0;TruScore=97;MatchId=2615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:80:1/1:1:43:1:15:./.:0:7:0:1:1/1:0:22:0/1:17:132:.:.:.
chr19	39044843	HG2_PB_SVrefine2PBcRplusDovetail_5248	A	ACACTTTGAGAGGCTGAGGCATGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACACGGTGAAACCCCATCTCTACTAAAAATACGAAAAAATAGCGGGCATGGTGGCATGCACCTGTAATCTGAGCTGCTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCTGGGAGGTAGAGGTTGCAGTGAGCTGAGATCGCGCCATTGCACTCCATCCTGGACAACAAAAGTGAAAGTCCATCTCAAAAAACAAAGAAACAAAAACAATTACTCTTGTTATACAATATTCTGTAAATCATGTGTGGTTCATCTCAGAGGATAAACTTCCAGAAGTGGGATAGCTGGGTTAAAAGGTAAATGCATTTGTCATTCGGACAGACATTGCCCTCCATTTTTCTTTCTCATTAATATCATATGAGAGTGTGCCTGTCTCCCCACAGCCTCGCCACCAGACCGCACTGTCAAATCTTTGGATTTTTGCCAATCTGATAGGTGAAAAACGGTATTGCAGTGTCGTTTAAATTTTTAATTTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAAAGTGGAGTGCAGTGGCGTAATCTCAGCTCATTGCAACCTCTGCCTAACGGGTTGAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCACCCGCCTTGGCCTCCCAAAGTCCAGATGCTTTTTCTGCATTTCCATTCATATGAAAATCTGCATTAAAAAAATGTAGCATTGTGGCCGGGCTCAGTGGCTCACGCCTGTAATCCCAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9096:HG2_PB_PB10Xdip_15215:HG4_Ill_MetaSV_2400:HG3_Ill_MetaSV_2477:HG2_Ill_MetaSV_2326:HG4_PB_HySA_26302:HG4_PB_pbsv_18061:HG2_PB_pbsv_18139:HG2_PB_HySA_32903:HG3_PB_pbsv_17821:HG4_Ill_SVrefine2DISCOVARDovetail_12601:HG3_PB_SVrefine2PBcRDovetail_8863:HG3_Ill_SVrefine2DISCOVARDovetail_12814:HG2_PB_SVrefine2PBcRplusDovetail_5248:HG2_PB_SVrefine2PB10Xhap12_13233:HG2_Ill_SVrefine2DISCOVARplusDovetail_6084:HG2_10X_SVrefine210Xhap12_12612:HG2_PB_SVrefine2Falcon1plusDovetail_5696:HG4_PB_SVrefine2Falcon1Dovetail_11278:HG2_PB_SVrefine2Falcon2Bionano_8917:HG3_PB_SVrefine2Falcon1Dovetail_11251;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12612:HG2_Ill_SVrefine2DISCOVARplusDovetail_6084:HG2_PB_SVrefine2PB10Xhap12_13233:HG2_PB_SVrefine2PBcRplusDovetail_5248:HG3_Ill_SVrefine2DISCOVARDovetail_12814:HG3_PB_SVrefine2PBcRDovetail_8863:HG4_Ill_SVrefine2DISCOVARDovetail_12601;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0517052;ClusterMaxSizeDiff=0.0506051;ClusterMaxEditDist=0.174715;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=889;DistBack=3177;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=224;REFWIDENED=19:39044844-39045067;PctSeqSimilarity=0.9881;PctSizeSimilarity=1;PctRecOverlap=0.8628;SizeDiff=0;StartDistance=-122;EndDistance=-122;GTMatch=0;TruScore=95;MatchId=2616.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:1/1:0:14:0:34:1/1:0:11:0:10:1/1:0:22:0/1:18:120:.:2003:.
chr19	39240899	HG2_Ill_GATKHCSBGrefine_11844	A	AAGCATTAATGGCTGGAAACTTTTCAAACTTGGTGTAAACGTTAATTTACACCAAACTCCAAGCAAACAAACATATGTATAATAGGACTCTGGGGAAAGGAGAGGAAGGAGAAAAATTTTTGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12615:HG3_PB_assemblyticsfalcon_12589:HG2_PB_HySA_32905:HG2_PB_pbsv_18141:HG3_PB_SVrefine2Falcon1Dovetail_11252:HG4_PB_pbsv_18063:HG4_Ill_GATKHC_28488:HG4_Ill_GATKHCSBGrefine_12234:HG3_Ill_GATKHC_28403:HG3_Ill_GATKHCSBGrefine_11723:HG2_Ill_GATKHC_28495:HG2_Ill_GATKHCSBGrefine_11844:HG3_PB_SVrefine2PBcRDovetail_8864:HG3_Ill_SVrefine2DISCOVARDovetail_12815:HG2_PB_SVrefine2Falcon1plusDovetail_5697;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11844:HG2_Ill_GATKHC_28495:HG3_Ill_GATKHCSBGrefine_11723:HG3_Ill_GATKHC_28403:HG4_Ill_GATKHCSBGrefine_12234:HG4_Ill_GATKHC_28488;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0731707;ClusterMaxSizeDiff=0.0650406;ClusterMaxEditDist=0.208835;PBcalls=7;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=122;DistBack=55;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=125;REFWIDENED=19:39240836-39240960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:17:0|1:13:0:3:13:./.:3:18:12:0:0/1:27:8:./.:.:.:.:.:.
chr19	39352005	HG4_Ill_GATKHCSBGrefine_12236	T	TATATATATTATATATATATTATATATATATATAATATATATATATTATATATATATAATATATATATATTATATATATATAAATATATATTATATATATAATATATATATATTATATATATATAATATATATATATTATATATATATAATATATATATATTATATATATATTATATATATATA	20	PASS	ClusterIDs=HG4_PB_pbsv_18065:HG2_PB_pbsv_18142:HG4_Ill_GATKHCSBGrefine_12236:HG4_PB_HySA_26304;NumClusterSVs=4;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_12236;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0592992;ClusterMaxSizeDiff=0.0592992;ClusterMaxEditDist=0.145553;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=183;DistBack=-1;DistForward=27;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=297;REFWIDENED=19:39352001-39352297;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:0|1:23:5:1:20:./.:0:2:12:0:0/1:37:8:./.:.:.:.:.:.
chr19	39522330	HG3_Ill_150bpfermikitraw_22392	G	GCACCTCACACCGGCTCCCAATGCTGCCCCGCCCCTCCGACACCTCACACCGGCTCCCAATGCTGCCCCGCCTCTCCGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5698:HG2_PB_HySA_32908:HG4_PB_pbsv_18068:HG4_PB_HySA_26308:HG4_Ill_GATKHC_28495:HG4_Ill_GATKHCSBGrefine_12238:HG3_Ill_GATKHC_28410:HG3_Ill_150bpfermikitraw_22392:HG2_Ill_GATKHC_28501:HG2_Ill_GATKHCSBGrefine_11847:HG2_Ill_250bpfermikitraw_23739:HG3_PB_HySA_27223:HG2_PB_PB10Xdip_15270:HG2_PB_pbsv_18144:HG3_Ill_SVrefine2DISCOVARDovetail_12817:HG2_PB_SVrefine2PBcRplusDovetail_5250:HG2_PB_SVrefine2PB10Xhap12_13235;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11847:HG2_Ill_GATKHC_28501:HG3_Ill_150bpfermikitraw_22392:HG3_Ill_GATKHC_28410:HG4_Ill_GATKHCSBGrefine_12238:HG4_Ill_GATKHC_28495;NumExactMatchSVs=6;ClusterMaxShiftDist=0.109756;ClusterMaxSizeDiff=0.097561;ClusterMaxEditDist=0.22619;PBcalls=9;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=78;DistBack=58;DistForward=115;DistMin=58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7489;REFWIDENED=19:39522269-39512589;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2620.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:21:0|1:18:0:0:20:./.:13:0:3:8:0/1:9:4:./.:.:.:.:.:.
chr19	39583812	HG2_Ill_GATKHCSBGrefine_11849	C	CTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	20	PASS	ClusterIDs=HG2_PB_pbsv_18146:HG2_PB_HySA_32912:HG4_PB_pbsv_18070:HG4_Ill_scalpel_16437:HG4_Ill_250bpfermikitraw_23395:HG2_Ill_Krunchall_24084:HG2_Ill_GATKHC_28505:HG2_Ill_GATKHCSBGrefine_11849:HG2_Ill_250bpfermikitraw_23743:HG2_Ill_150bpfermikitraw_22365;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22365:HG2_Ill_250bpfermikitraw_23743:HG2_Ill_GATKHCSBGrefine_11849:HG2_Ill_GATKHC_28505:HG2_Ill_Krunchall_24084:HG4_Ill_250bpfermikitraw_23395:HG4_Ill_scalpel_16437;NumExactMatchSVs=7;ClusterMaxShiftDist=0.12844;ClusterMaxSizeDiff=0.12844;ClusterMaxEditDist=0.236364;PBcalls=3;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=19:39583811-39583814;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2621.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:14:./.:15:5:2:7:./.:1:5:16:0:0/1:16:21:./.:.:.:.:.:.
chr19	39643909	HG3_Ill_SVrefine2DISCOVARDovetail_12819	T	TTTTTTTTGAGACAGAGTCCCACTCCATCACCCAGGCTGAAGTGCAGTGGCACAATCTCAGCTTACTGCAACCTCCACCTTCTGGGTTCAAGCAATTCTCGTACCTCAGCCTTCCGAGTAGCTGGAATCACAGGCATGTGCCACCACACCCGGCTAATTTTTGTGTTTTGTTGTTGTTGTTTTA	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_12819:HG2_PB_pbsv_18147:HG2_PB_HySA_32914;NumClusterSVs=3;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_12819;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0374332;ClusterMaxSizeDiff=0.0320856;ClusterMaxEditDist=0.154667;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=183;DistBack=4802;DistForward=155;DistMin=155;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=317;REFWIDENED=19:39643910-39644226;PctSeqSimilarity=0.9949;PctSizeSimilarity=0.9945;PctRecOverlap=0.388;SizeDiff=1;StartDistance=-112;EndDistance=-112;GTMatch=0;TruScore=79;MatchId=2622.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:14:0|1:20:0:3:14:./.:5:0:1:9:0/1:17:14:./.:.:.:.:.:.
chr19	40286367	HG2_PB_SVrefine2Falcon2Bionano_8918	C	CAAAAAAAAAAAAAAAAAAAAAAAAAAATGTATGAGCCCTTAGAATGGTGCCTGACACACATAGAGCACTGTATAAATACGTTTAATTATATTATTTTCCTTTTTTTTTTCTTTGGAGACAGTTTCACTCTGTCACCCAGGCTGAAGTGCAGTGGAGCAATAATCTCAGTTCGCTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTCCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCACAACCATGGCCAGTTATATTTATATTATTTTTCGATACACATGATGTTCTGGGCATTAATTTTTTTTTCCCAACGAGGCTTCTTTTTTTAAAAAAAAAAAAAAGGGTTGGGGTAAGTTTTGCTTTTTGTTTTATATTCTTCAGTACTTAAAAACTTTGTCATTTTCAGGCCAGGCACGGTGGCTCATGCCTGTAATAGCAACACTTTGGGAGGCCAAGGCGGGCAGATCACCTGAGATCAAGAGTTCGACAGCAGCCTGGTCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGTAATCCCAGCTACTTGGGAGGCTGAGGCCGGAGAATGGCTTGAACCTGGGCGACGGAGGTTGCAGTGAGCCAAGATCGCATCACTGTACTCCAGCCTGGGCAACAAAGCAAGGCTCCGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5700:HG4_Ill_GATKHCSBGrefine_12243:HG3_PB_pbsv_17830:HG4_PB_HySA_26315:HG4_Ill_Spiral_1393:HG4_PB_pbsv_18074:HG4_Ill_MetaSV_2402:HG4_PB_assemblyticsfalcon_12398:HG3_PB_assemblyticsfalcon_12599:HG2_PB_pbsv_18151:HG3_PB_SVrefine2Falcon1Dovetail_11255:HG3_Ill_SVrefine2DISCOVARDovetail_12822:HG2_10X_SVrefine210Xhap12_12623:HG2_Ill_SVrefine2DISCOVARplusDovetail_6090:HG2_PB_SVrefine2PBcRplusDovetail_5253:HG2_PB_SVrefine2PB10Xhap12_13238:HG2_PB_SVrefine2Falcon2Bionano_8918:HG3_PB_SVrefine2PBcRDovetail_8866:HG4_PB_SVrefine2Falcon1Dovetail_11280:HG2_PB_HySA_32924:HG2_PB_PB10Xdip_15287:HG4_Ill_SVrefine2DISCOVARDovetail_12608:HG4_PB_SVrefine2PBcRDovetail_9099;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8918:HG2_PB_SVrefine2PB10Xhap12_13238:HG2_PB_SVrefine2PBcRplusDovetail_5253;NumExactMatchSVs=3;ClusterMaxShiftDist=0.214627;ClusterMaxSizeDiff=0.214627;ClusterMaxEditDist=0.270985;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=701;DistBack=-26;DistForward=-1;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=33;REFWIDENED=19:40286368-40286400;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9986;PctRecOverlap=0.9972;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2624.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:11:0:8:./.:1:5:0:0:./.:0:0:./.:6:106:.:.:.
chr19	41005988	HG2_Ill_breakscan11_4853	A	AAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAATCTTTGCTGAGCATGGTGGTACAC	20	PASS	ClusterIDs=HG4_PB_pbsv_18080:HG2_PB_HySA_32935:HG3_PB_HySA_27238:HG4_PB_HySA_26322:HG3_PB_assemblyticsfalcon_12604:HG2_Ill_breakscan11_4853:HG4_PB_assemblyticsfalcon_12404:HG3_PB_pbsv_17836:HG2_PB_pbsv_18156;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_breakscan11_4853;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.230769;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=21895;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=19:41005987-41005990;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:23:0|1:24:3:0:17:1|0:0:9:23:0:./.:28:3:./.:.:.:.:.:.
chr19	41425923	HG3_Ill_Krunchall_23677	A	ACCCTTATCAGTGGTTCTGCTTTTGCCCTTTGCCCTGTTCCCTCAGAAGCATGTGATCTTTGTTAGG	20	PASS	ClusterIDs=HG3_PB_HySA_27241:HG4_PB_pbsv_18082:HG3_PB_pbsv_17838:HG2_PB_PB10Xdip_15308:HG2_PB_pbsv_18158:HG4_PB_HySA_26327:HG4_PB_assemblyticsfalcon_12408:HG4_Ill_Krunchall_24450:HG4_Ill_GATKHC_28516:HG4_Ill_GATKHCSBGrefine_12248:HG4_Ill_250bpfermikitraw_23411:HG4_Ill_150bpfermikitraw_22526:HG3_Ill_Spiral_18365:HG3_Ill_Krunchall_23677:HG3_Ill_GATKHCSBGrefine_11731:HG3_Ill_250bpfermikitraw_23085:HG3_Ill_150bpfermikitraw_22411:HG2_Ill_Krunchall_24096:HG2_Ill_GATKHCSBGrefine_11855:HG2_Ill_250bpfermikitraw_23758:HG2_Ill_150bpfermikitraw_22381;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22381:HG2_Ill_250bpfermikitraw_23758:HG2_Ill_GATKHCSBGrefine_11855:HG2_Ill_Krunchall_24096:HG3_Ill_150bpfermikitraw_22411:HG3_Ill_250bpfermikitraw_23085:HG3_Ill_GATKHCSBGrefine_11731:HG3_Ill_Krunchall_23677:HG3_Ill_Spiral_18365:HG4_Ill_150bpfermikitraw_22526:HG4_Ill_250bpfermikitraw_23411:HG4_Ill_GATKHCSBGrefine_12248:HG4_Ill_GATKHC_28516:HG4_Ill_Krunchall_24450:HG4_PB_assemblyticsfalcon_12408;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0735294;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.205882;PBcalls=7;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=26731;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=134;REFWIDENED=19:41425822-41425955;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2626.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:73:./.:1:8:0:0:./.:1:5:1:5:1/1:0:58:./.:.:.:.:.:.
chr19	41608743	HG2_PB_SVrefine2Falcon1plusDovetail_5705	C	CGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCGGCCGCCCCGTCGAGAAGTGAGAGACCCTCTGCCTGGCAACCACCCTGTCTGAGAAGTGAAGCCCCTCCGCCCGGCAGCCGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCAGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCCGCCTGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCATCCGGGAGGGAGGTGGGGGTCAGCCCCCCCGCCCGGCCAGCCGTGCCGTCCGGAGGGAGGTGGGGGTCAGCCCCCGCCTGGCCAGCCGTGCCATCCGGGGGAGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGAGGTGAGGGCGCCTCTGCCCGGCTGCCCCTACTGGGAAGTGAAGCCCCTCAGCCTGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGAGGGAGGTGGGGGGTCAGCCCCCGCCTGGCCAGCCGCCCCGTCCGGAGGGAGGTGGGGGGGTCAGCCTCCCCCCGGCCAGCCACCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCTGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGGGGGTCAGCCCTCCCCCCGCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5705:HG2_PB_pbsv_18160;NumClusterSVs=2;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5705;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0936266;ClusterMaxSizeDiff=0.0936266;ClusterMaxEditDist=0.170333;PBcalls=2;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=927;DistBack=42456;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=896;REFWIDENED=19:41608744-41609639;PctSeqSimilarity=0.9642;PctSizeSimilarity=0.9527;PctRecOverlap=0.8633;SizeDiff=-46;StartDistance=-110;EndDistance=-110;GTMatch=0;TruScore=92;MatchId=2627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:26:0|1:23:0:0:22:./.:0:2:13:0:./.:23:2:0/1:27:47:.:1020:.
chr19	41879526	HG3_Ill_MetaSV_2479	C	CGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTGGTGGGCGCCTGTAGTCCCAGCCGCTCAGGATGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCAAGATCTCGTCACTGCACTCTAGCCTGGGCAACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGAAAAGAATAAGATATAGTATGTTTCTTTTCTTTTCTTTTTCTTTTTTTTGTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCGATTCACTGCAACCTCTGCCTCCGGGGTTCAAGTGATTCTCCCGCCTCAGCCTCCCGAATGGCTGGGACTACAGACATCCACCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACTGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCATCATGCCCGGCCGGTGTGTTTCCTTTCTTTTTTTTTTTTTTTTTTTTAATCATTTTTGGCCAGGCACGGTGGCTCAT	20	PASS	ClusterIDs=HG3_PB_HySA_27249:HG2_PB_HySA_32941:HG3_PB_pbsv_17843:HG2_PB_pbsv_18162:HG4_PB_HySA_26331:HG4_PB_pbsv_18087:HG2_PB_PB10Xdip_15314:HG4_Ill_MetaSV_2408:HG4_Ill_GATKHCSBGrefine_12250:HG3_Ill_MetaSV_2479:HG3_Ill_GATKHCSBGrefine_11733:HG2_Ill_GATKHCSBGrefine_11857:HG2_Ill_MetaSV_2332:HG3_PB_SVrefine2PBcRDovetail_8872:HG2_PB_SVrefine2Falcon1plusDovetail_5708:HG4_Ill_SVrefine2DISCOVARDovetail_12614:HG2_PB_SVrefine2PBcRplusDovetail_5257:HG2_PB_SVrefine2PB10Xhap12_13248:HG2_PB_SVrefine2Falcon2Bionano_8924:HG2_Ill_SVrefine2DISCOVARplusDovetail_6097:HG2_10X_SVrefine210Xhap12_12629:HG4_PB_SVrefine2Falcon1Dovetail_11285:HG4_PB_SVrefine2PBcRDovetail_9103:HG3_PB_SVrefine2Falcon1Dovetail_11263;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11857:HG3_Ill_GATKHCSBGrefine_11733:HG3_Ill_MetaSV_2479:HG4_Ill_GATKHCSBGrefine_12250:HG4_Ill_MetaSV_2408;NumExactMatchSVs=5;ClusterMaxShiftDist=0.079237;ClusterMaxSizeDiff=0.0777696;ClusterMaxEditDist=0.225553;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=673;DistBack=-235;DistForward=47919;DistMin=-235;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=246;REFWIDENED=19:41879518-41879763;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2628.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:1:22:1:5:1/1:0:8:1:8:1/1:0:32:1/1:4:106:.:.:.
chr19	44021509	HG2_Ill_SVrefine2DISCOVARplusDovetail_6108	C	CGGCCAGGCACGGTGGCTCACGCCTGTAATCCCAGGACTTTGGGAGGCTGAGGCAGGCGGATCACAAGGTCAGGAGTTCGAGACCAGTCTGGCCAACATAGTGAAACACCGTCTCTACTAAAAATATAAAAATTAGCTGGGTGTTATGGTGTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAAGAGAATCGCGTGAACCCGGGAGGCAGAAGTTGCAGTGAGCCAACATCGCACCACTGTACTACAGCCTGGGCAACACAGTGAGGCTCCATCTTGGAAAAAAACATATATATGTATAAAATGCATTTTTTTAAAGACAGGGCCTCACACTGTACCCAGGCTGGAGTACAGTGGCGCAATCATATCTCACTGCTGCCTGAACTCCCAGGCTCAAGCGATCCTCCCACACCAGCCTTTCCAGTAGCCGGGACTATAGGCGCACCAGCATGCCTGGCTAATTTGTTTTTAATTTTTTGTAGAGACAGGGTCTTGCAGTGTTGCCCAGGCTGGTCTCAAATACCTGGGCTCAAACTATCCTCCCACCTCAGCCTCCCAAAGTCCTGGGATTACAGGCATGAACCACTGTGCCCAGCCTATTACTATTATTTATTTTTTTTTTTTTTTGAGACGGAATCTCGCTCTGTCACCCAGGTTGGAGTGCAGTGGCATGAACTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCATCACACCCAGCTAATTTTTTTTGTATTTTTCAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGACCTCATGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGCGCCTGGCCTTATTATTATTAACTAATACAAAAATATCTACAATCTACTTCAGTTCATAGGAAAGAAAAGTTTTAATAAGACAAATTAAATGACACACCATGAGGAAACAGTCGAACACGTCTAGAATGTGGAATATTTTAGAAGACAGCATGTCAGGAAGCTTCAAAAGTCAATACCCTGGAG	20	PASS	ClusterIDs=HG4_Ill_Spiral_1394:HG4_PB_pbsv_18096:HG4_PB_HySA_26346:HG2_PB_HySA_32969:HG2_PB_pbsv_18170:HG2_Ill_MetaSV_2337:HG3_PB_HySA_27259:HG4_Ill_MetaSV_2411:HG4_PB_HySA_26345:HG2_PB_PB10Xdip_15360:HG3_PB_pbsv_17854:HG3_PB_SVrefine2Falcon1Dovetail_11276:HG2_PB_SVrefine2Falcon2Bionano_8932:HG2_PB_SVrefine2Falcon1plusDovetail_5715:HG4_Ill_SVrefine2DISCOVARDovetail_12625:HG3_Ill_SVrefine2DISCOVARDovetail_12837:HG2_Ill_SVrefine2DISCOVARplusDovetail_6108:HG2_PB_SVrefine2PB10Xhap12_13256:HG2_10X_SVrefine210Xhap12_12645:HG4_PB_SVrefine2PBcRDovetail_9113:HG4_PB_SVrefine2Falcon1Dovetail_11292:HG3_PB_SVrefine2PBcRDovetail_8882;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6108:HG3_Ill_SVrefine2DISCOVARDovetail_12837:HG4_Ill_SVrefine2DISCOVARDovetail_12625;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0764784;ClusterMaxSizeDiff=0.0755892;ClusterMaxEditDist=0.222805;PBcalls=15;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=1088;DistBack=9920;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=138;REFWIDENED=19:44021510-44021647;PctSeqSimilarity=0.9973;PctSizeSimilarity=1;PctRecOverlap=0.9706;SizeDiff=0;StartDistance=-32;EndDistance=-32;GTMatch=0;TruScore=98;MatchId=2631.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:0:23:2:15:1/1:0:15:0:11:1/1:0:30:./.:21:218:.:.:.
chr19	44169841	HG2_PB_SVrefine2PB10Xhap12_13258	G	GGAGACAGGGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACTATCTCAGCTCACTACAACCGCTGCCTCATGGGTTCAGGTGATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACTACAGGCACATGCCATCACACTTGGCTAATAATTAATTAATGTTTTAAGAGACAAGGTATTGGCTGGGTGCGGTGGCTCAGGCCTGTAATCCCAGCACTGGGAGGCTGAGGCAGGCAGATCATGAGGTCAGGAGCTCGAGATCATCCTGGCTAACACGGTGAAACCCCGTCTTTACTAAAAGTACAAAAAAATCACTGGGTGTGGTGGCATGCGCCTGTAGTCCCAACTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAGTGGGCTGAGATTGTACCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAGAAAAGAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8933:HG4_PB_HySA_26348:HG3_Ill_Spiral_18380:HG2_Ill_Spiral_1171:HG4_Ill_Spiral_1395:HG3_PB_pbsv_17856:HG2_PB_pbsv_18172:HG3_PB_assemblyticsfalcon_12632:HG2_PB_HySA_32971:HG3_Ill_MetaSV_2482:HG4_Ill_MetaSV_2412:HG4_Ill_GATKHCSBGrefine_12254:HG3_Ill_GATKHCSBGrefine_11739:HG2_Ill_GATKHCSBGrefine_11862:HG2_PB_PB10Xdip_15362:HG4_PB_pbsv_18098:HG3_PB_HySA_27261:HG2_PB_assemblyticsPBcR_12225:HG2_PB_assemblyticsfalcon_12610:HG2_10X_SVrefine210Xhap12_12648:HG4_Ill_SVrefine2DISCOVARDovetail_12626:HG3_PB_SVrefine2PBcRDovetail_8883:HG3_Ill_SVrefine2DISCOVARDovetail_12839:HG2_PB_SVrefine2PBcRplusDovetail_5265:HG2_PB_SVrefine2PB10Xhap12_13258:HG2_Ill_SVrefine2DISCOVARplusDovetail_6109:HG4_PB_SVrefine2PBcRDovetail_9115:HG3_PB_SVrefine2Falcon1Dovetail_11277:HG4_PB_SVrefine2Falcon1Dovetail_11293:HG2_PB_SVrefine2Falcon1plusDovetail_5716;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6109:HG2_PB_SVrefine2PB10Xhap12_13258:HG2_PB_SVrefine2PBcRplusDovetail_5265:HG3_Ill_SVrefine2DISCOVARDovetail_12839:HG3_PB_SVrefine2PBcRDovetail_8883:HG4_Ill_SVrefine2DISCOVARDovetail_12626;NumExactMatchSVs=6;ClusterMaxShiftDist=0.200828;ClusterMaxSizeDiff=0.200828;ClusterMaxEditDist=0.254658;PBcalls=18;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=488;DistBack=36860;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=19:44169842-44169877;PctSeqSimilarity=0.9951;PctSizeSimilarity=1;PctRecOverlap=0.9509;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=98;MatchId=2632.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:23:0:20:1/1:0:5:0:11:1/1:0:18:1/1:4:96:.:.:.
chr19	44183352	HG3_Ill_SVrefine2DISCOVARDovetail_12840	G	GGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGCATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAATATGATGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCGTGGTGGCGTGTGCCTGTAGTCCCAGCTACTTGTGAGGCTGAGGCAGGAGAATTGCCAGAACCCATCAGGCGGAGGCTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAAGGTGACCCTGTGATGACAGAGAGACACAGGAATAATGCCATGTAAAGACAAAGGAAGAGACCGGAGCTAGGCAGCTGCAAGCCAAGGACCACCAAAGATTGCCAGAAAGCCACTGCTGCTGGGAAGAGCCAGGAAGGATTCCTCTATGGGTTTATGGCCCTGCTGACACCTTGATCTTGGACTTCTGGACTCTGGACTGTGAGACAATACATTTGTCGTTCTGACCCACCCAGTCTGTAGTACTTTGTAACAGCAGCCATAGGAGGCTAACAGAGCTTCTATGAATCAATTGGGTGGAGCACA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9116:HG4_PB_pbsv_18099:HG2_PB_pbsv_18173:HG4_PB_HySA_26349:HG3_PB_HySA_27263:HG2_PB_HySA_32974:HG2_PB_PB10Xdip_15363:HG4_Ill_MetaSV_2413:HG2_Ill_MetaSV_2338:HG2_PB_HySA_32973:HG4_PB_SVrefine2Falcon1Dovetail_11294:HG4_Ill_SVrefine2DISCOVARDovetail_12627:HG3_PB_SVrefine2PBcRDovetail_8884:HG3_PB_SVrefine2Falcon1Dovetail_11278:HG3_Ill_SVrefine2DISCOVARDovetail_12840:HG2_Ill_SVrefine2DISCOVARplusDovetail_6110:HG2_PB_SVrefine2Falcon1plusDovetail_5717:HG2_10X_SVrefine210Xhap12_12649:HG2_PB_SVrefine2PBcRplusDovetail_5266:HG2_PB_SVrefine2PB10Xhap12_13259:HG2_PB_SVrefine2Falcon2Bionano_8934;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6110:HG3_Ill_SVrefine2DISCOVARDovetail_12840:HG3_PB_SVrefine2Falcon1Dovetail_11278:HG3_PB_SVrefine2PBcRDovetail_8884:HG4_Ill_SVrefine2DISCOVARDovetail_12627;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0395713;ClusterMaxSizeDiff=0.0214345;ClusterMaxEditDist=0.207749;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=601;DistBack=6479;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=863;REFWIDENED=19:44183353-44184215;PctSeqSimilarity=0.9857;PctSizeSimilarity=1;PctRecOverlap=0.7787;SizeDiff=0;StartDistance=-133;EndDistance=-133;GTMatch=0;TruScore=92;MatchId=2633.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:83:1/1:1:16:0:19:1/1:0:15:0:17:1/1:0:21:./.:3:36:.:.:.
chr19	44807056	HG4_Ill_GATKHCSBGrefine_12258	T	TAAATATATACGTATATATTTGTATATATTTGTATACAAATATATACGTATATATTTGTATAC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22401:HG2_PB_assemblyticsfalcon_12617:HG4_PB_HySA_26354:HG4_PB_pbsv_18102:HG2_Ill_breakscan11_4855:HG2_PB_pbsv_18177:HG4_Ill_svaba_22249:HG2_PB_assemblyticsPBcR_12231:HG4_Ill_Krunchall_24469:HG2_PB_HySA_32976:HG4_Ill_GATKHC_28544:HG4_Ill_GATKHCSBGrefine_12258:HG4_Ill_250bpfermikitraw_23428:HG4_Ill_150bpfermikitraw_22545:HG2_Ill_svaba_22272:HG2_Ill_SpiralSDKrefine_7922:HG2_Ill_Krunchall_24118:HG2_Ill_GATKHC_28552:HG2_Ill_GATKHCSBGrefine_11866:HG2_Ill_250bpfermikitraw_23778;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22401:HG4_Ill_svaba_22249:HG4_Ill_Krunchall_24469:HG4_Ill_GATKHC_28544:HG4_Ill_GATKHCSBGrefine_12258:HG4_Ill_250bpfermikitraw_23428:HG4_Ill_150bpfermikitraw_22545:HG2_Ill_svaba_22272:HG2_Ill_SpiralSDKrefine_7922:HG2_Ill_Krunchall_24118:HG2_Ill_GATKHC_28552:HG2_Ill_GATKHCSBGrefine_11866:HG2_Ill_250bpfermikitraw_23778;NumExactMatchSVs=13;ClusterMaxShiftDist=0.288136;ClusterMaxSizeDiff=0.266667;ClusterMaxEditDist=0.338983;PBcalls=6;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=12368;DistForward=8688;DistMin=8688;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=24;REFWIDENED=19:44807055-44807081;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2634.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:39:0|1:33:7:3:27:0|1:11:0:0:12:0/1:31:28:./.:.:.:.:.:.
chr19	44953873	HG3_PB_SVrefine2PBcRDovetail_8885	T	TGAAAGGTTTCGCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCGCTCTCCGTCTCCCTCTCGCTCTCCCTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCATCCTCCCTGCCTGATTCTCCTGCCTCAGTCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACAGGGTTTCGCTGTGTTGGCCGGGCCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAACCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTACACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCACCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGGGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCTGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCCGCCCGGCCAGCTGTGCCATCCGGAGGGAGGTGGGGGGGGTCAGCCCCCCTCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCGTCCGGGAGGGAGGTGGGGGGGTCGCCCCCGCCCGACCAGCCCCCATCCGGTCGCCCCCCCCCCCCCCCCCCGGCCAGCCCGCCCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGCGCCTCTGCCCGGCCGCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGGTCAGCCCCCCCCGACCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCAGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCCTTGTGGAATAGAAAGGCGGGAAAGGCGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGTCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTTAAAAAAATAAATAAATAAATAAATAAATAAATAAAATAAAATAAAAAAGCTAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8885:HG2_PB_pbsv_18179:HG2_PB_HySA_32977;NumClusterSVs=3;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_8885;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0395814;ClusterMaxSizeDiff=0.0384396;ClusterMaxEditDist=0.0932445;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2576;DistBack=-31;DistForward=10;DistMin=-31;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=19:44953874-44953883;PctSeqSimilarity=0.9832;PctSizeSimilarity=0.9677;PctRecOverlap=0.9677;SizeDiff=-86;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:48:./.:18:13:13:25:1|0:0:5:40:0:0/1:34:6:0/1:97:229:.:2652:.
chr19	45444688	HG3_Ill_svaba_22505	T	TTTTTCATATTTCTGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAAACTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAATAAAAATAAAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12654:HG2_Ill_MetaSV_2340:HG2_PB_assemblyticsfalcon_12627:HG3_PB_pbsv_17867:HG2_PB_pbsv_18184:HG3_PB_HySA_27276:HG2_PB_SVrefine2Falcon1plusDovetail_5720:HG3_Ill_svaba_22505:HG3_Ill_manta_3948:HG3_Ill_Spiral_18394:HG3_Ill_MetaSV_2484:HG3_Ill_GATKHCSBGrefine_11745:HG2_Ill_svaba_22285:HG2_Ill_manta_4829:HG2_Ill_SVrefine2DISCOVARplusDovetail_6122:HG2_Ill_GATKHCSBGrefine_11873;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12654:HG3_Ill_svaba_22505:HG3_Ill_manta_3948:HG3_Ill_Spiral_18394:HG3_Ill_MetaSV_2484:HG3_Ill_GATKHCSBGrefine_11745:HG2_Ill_svaba_22285:HG2_Ill_manta_4829:HG2_Ill_SVrefine2DISCOVARplusDovetail_6122:HG2_Ill_GATKHCSBGrefine_11873;NumExactMatchSVs=10;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.282051;PBcalls=5;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=114;DistBack=39858;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=19:45444689-45444699;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:18:0|1:26:1:2:14:1|0:1:17:9:0:0/1:20:28:./.:.:.:.:.:.
chr19	45513571	HG2_Ill_GATKHCSBGrefine_11874	T	TCAAAAAGAAAACCAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11283:HG3_PB_pbsv_17869:HG4_PB_pbsv_18109:HG2_PB_pbsv_18186:HG4_PB_assemblyticsfalcon_12449:HG2_PB_assemblyticsPBcR_12238:HG2_PB_assemblyticsfalcon_12629:HG4_PB_SVrefine2Falcon1Dovetail_11298:HG2_PB_SVrefine2PBcRplusDovetail_5268:HG2_PB_SVrefine2PB10Xhap12_13266:HG2_PB_SVrefine2Falcon2Bionano_8939:HG2_Ill_MetaSV_2341:HG2_PB_SVrefine2Falcon1plusDovetail_5722:HG2_Ill_breakscan11_4856:HG2_PB_HySA_32984:HG2_PB_PB10Xdip_15881:HG3_PB_assemblyticsfalcon_12653:HG3_PB_HySA_27277:HG3_PB_SVrefine2PBcRDovetail_8888:HG3_Ill_MetaSV_2486:HG3_Ill_GATKHCSBGrefine_11746:HG2_Ill_GATKHCSBGrefine_11874;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11874:HG3_Ill_GATKHCSBGrefine_11746:HG3_Ill_MetaSV_2486:HG3_PB_SVrefine2PBcRDovetail_8888;NumExactMatchSVs=4;ClusterMaxShiftDist=0.184664;ClusterMaxSizeDiff=0.184664;ClusterMaxEditDist=0.219092;PBcalls=17;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=320;DistBack=-1;DistForward=15;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=19:45513572-45513587;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2637.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:1/1:0:7:0:16:./.:0:2:0:3:1/1:0:23:1/1:1:46:.:.:.
chr19	45697067	HG3_PB_SVrefine2Falcon1Dovetail_11286	G	GTTTTTGTTTTTGAGATGGAGTCTTGCCCTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCTTGTAGCTGGGATTACAGGCACCTACCACCACCCCCAGACAATTTTTATATTTTTAGTAGAGACAGGGTTTCACTGTGTTGGCCAGGCTGGTCTTGAACTCCCGACCTCAAGCGATCTGCCCATCTTGACCTCCCAAAGTGTTGGGATTACATGTGTGAGCCACTGTGCCTGGCCTATTCCATTTTTTCTGTGATCAGCCAGTGACCTGGAAAAGATTTTTTTTTTAATGTCTGGCTCCAAAAAGGGGAACAGGGAGTGTCTTTCTTGCCTTTTTAAATCTTCTGATGTATACTACCAGGGGAAGCCACTTCTGCTGAGATGGCTAAAACTAAGGTAAGTGTCTTCACCCATCGCTTGGGCACCACCAGACCAATCCAAATGCACAGCTCCAAAGTTTTGGAAGGCAAGGTTACCACTGCCCTCCCTGGTACTAGCTAGGCACTCCAAAGTCCTAGAATTTGAATTTTTAAAATCTCCATTTACTGAGTAAATTGTCAATTGGGATTTTTTAATATGTTGACTATATTAATCATAGTTATTTAAATATATATGTTGATTGGGCAGCCAAGGTGGGTGGATCATTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAGCATAGTGAAACCCCGTCTCTACTAAAAATACAAAATTATCCGGGCGTGGTGGCGCACGCTGTAAGTCCAGCTACTCCGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGAAGGCAAAGGTTGCAGTGAGGAGAGATCGCACCACTGCACTCCAGCCTGGGCAACAGAGCAGGACTCCATCTCAAAAGAAAAAAAAAAAAACAGAAACGAAACAACACGCAAACAAACTATATATATATATATATATATATATATATCACACACACAAGTGGTATGGACAGTATCAGCTAGCACCCCCATTCCTCAGCCCCATTGTGGGTATGGGATAGCATCCTGCTCTCCATCAGGAGGACATAAAAATTTGGACAATTTGGGGACACTGTTTAGCAGTACTTCTAAGATTAGAAATATGCATACCCCGTTGATATGGTTTGGTTGTGTGTCCCCACCCAAATCTCACCTGGAATTTGTAATCCCCACATGTCAAGGGAGGGACCTGGTCAGAGGTGACTGGATTATAGGGGTGGTTTCCCCCATGCTGTTCTCGTGATGGTGAGTGAGTTCTCACGAGAGCTGATGGTTTTTTTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5724:HG2_PB_pbsv_18189:HG4_PB_pbsv_18113:HG2_PB_PB10Xdip_15884:HG4_PB_pbsv_18112:HG2_PB_PB10Xdip_15883:HG3_PB_HySA_27279:HG3_PB_pbsv_17872:HG2_PB_HySA_32987:HG3_PB_SVrefine2Falcon1Dovetail_11286:HG2_PB_SVrefine2PB10Xhap12_13270:HG4_PB_SVrefine2PBcRDovetail_9120:HG3_PB_SVrefine2PBcRDovetail_8890:HG2_PB_SVrefine2Falcon2Bionano_8942:HG2_PB_SVrefine2PBcRplusDovetail_5271:HG4_PB_SVrefine2Falcon1Dovetail_11301;NumClusterSVs=16;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11286;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0770359;ClusterMaxSizeDiff=0.0763023;ClusterMaxEditDist=0.265241;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1322;DistBack=9;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=294;REFWIDENED=19:45697068-45697361;PctSeqSimilarity=0.9909;PctSizeSimilarity=0.9939;PctRecOverlap=0.9554;SizeDiff=8;StartDistance=-55;EndDistance=-55;GTMatch=1;TruScore=98;MatchId=2638.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:1/1:1:20:0:26:./.:0:3:0:9:1/1:0:22:./.:15:212:.:1334:.
chr19	45828384	HG4_Ill_MetaSV_2415	A	AAGGAGGCTGAGGCAGGAGGATTGCTTGAGCTCAGGAGTTCAAGACCACCCTGGCCAACGCGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCGGACATGGTGGGACACACCTATAGTCTCAGCTACTCAGGAGGCCGAGATGGGAGGATCACTTGAGCCTGGGGAGGTGAGGCTGCGGTGAGCTGTGATCGCACTGCTGCACTCCAGCCTTGGTGACAGAGCGAGACTGTGTCTAAAAAAAAAACAAAAAACAAAAAACAATTGAACTGAGGGAGACAGAGCAGAAGGATGGACTCCAGAGCCTGAGAAGGGTAATAGGCCAGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGAGGAAGGATCCCTTGAGCCCAGGAGTTAGAGACTAGCCTCGGCAACATAGCTAAACCCCGTCTCCACAAAAAATAAAAAAAACTACAAAAATTATCTGGGCGTAGTGGAGTGCATCTGTGGTCCCAGCTACTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4857:HG2_PB_pbsv_18190:HG3_PB_pbsv_17873:HG4_PB_pbsv_18114:HG4_PB_HySA_26361:HG4_PB_assemblyticsfalcon_12453:HG2_PB_assemblyticsfalcon_12632:HG2_PB_assemblyticsPBcR_12242:HG3_PB_assemblyticsfalcon_12656:HG2_PB_PB10Xdip_15885:HG4_PB_SVrefine2PBcRDovetail_9121:HG4_PB_SVrefine2Falcon1Dovetail_11302:HG4_Ill_SVrefine2DISCOVARDovetail_12634:HG4_Ill_MetaSV_2415:HG4_Ill_GATKHCSBGrefine_12266:HG3_Ill_SVrefine2DISCOVARDovetail_12849:HG3_Ill_MetaSV_2488:HG3_Ill_GATKHCSBGrefine_11749:HG2_PB_SVrefine2PBcRplusDovetail_5272:HG2_PB_SVrefine2PB10Xhap12_13271:HG2_PB_SVrefine2Falcon2Bionano_8943:HG2_PB_SVrefine2Falcon1plusDovetail_5725:HG2_Ill_SVrefine2DISCOVARplusDovetail_6124:HG2_Ill_MetaSV_2343:HG2_Ill_GATKHCSBGrefine_11877:HG2_10X_SVrefine210Xhap12_12661:HG3_PB_SVrefine2PBcRDovetail_8891:HG3_PB_SVrefine2Falcon1Dovetail_11287;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12661:HG2_Ill_GATKHCSBGrefine_11877:HG2_Ill_MetaSV_2343:HG2_Ill_SVrefine2DISCOVARplusDovetail_6124:HG2_PB_SVrefine2Falcon1plusDovetail_5725:HG2_PB_SVrefine2Falcon2Bionano_8943:HG2_PB_SVrefine2PB10Xhap12_13271:HG2_PB_SVrefine2PBcRplusDovetail_5272:HG3_Ill_GATKHCSBGrefine_11749:HG3_Ill_MetaSV_2488:HG3_Ill_SVrefine2DISCOVARDovetail_12849:HG4_Ill_GATKHCSBGrefine_12266:HG4_Ill_MetaSV_2415:HG4_Ill_SVrefine2DISCOVARDovetail_12634:HG4_PB_SVrefine2Falcon1Dovetail_11302:HG4_PB_SVrefine2PBcRDovetail_9121;NumExactMatchSVs=16;ClusterMaxShiftDist=0.178571;ClusterMaxSizeDiff=0.178571;ClusterMaxEditDist=0.238806;PBcalls=17;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=509;DistBack=7662;DistForward=14610;DistMin=7662;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=19:45828385-45828419;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:0:23:1:24:1/1:0:11:0:12:1/1:0:20:1/1:3:90:.:.:.
chr19	46151531	HG3_PB_SVrefine2PBcRDovetail_8893	C	CAGCCCCCGCCCGGCCAGCCGCCCGTCCGGGAGGAGGTGGGGGGGTCAGCCCCGCGCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCGCGCCCGGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5274:HG3_PB_assemblyticsfalcon_12659:HG2_PB_assemblyticsfalcon_12634:HG3_PB_SVrefine2Falcon1Dovetail_11289:HG2_PB_SVrefine2Falcon1plusDovetail_5727:HG3_PB_SVrefine2PBcRDovetail_8893:HG4_PB_SVrefine2Falcon1Dovetail_11304:HG2_PB_SVrefine2PB10Xhap12_13274:HG2_PB_SVrefine2Falcon2Bionano_8945:HG4_PB_SVrefine2PBcRDovetail_9123;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_8893;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0640301;ClusterMaxSizeDiff=0.0601504;ClusterMaxEditDist=0.136622;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=257;DistBack=10627;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=311;REFWIDENED=19:46151532-46151842;PctSeqSimilarity=0.9623;PctSizeSimilarity=0.938;PctRecOverlap=0.6836;SizeDiff=-17;StartDistance=-78;EndDistance=-78;GTMatch=0;TruScore=86;MatchId=2640.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:37:./.:0:3:2:23:./.:0:0:0:0:./.:10:1:./.:.:.:.:.:.
chr19	47256560	HG4_Ill_SVrefine2DISCOVARDovetail_12650	C	CAAAATTAGCCGGGTGTGGTGGCGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCGGTGAGCCTAGATGGCGCCATTGCACTTCACCCTGGGTAACGAGAGTGAAACTTTGTATCAAAAGAAAATATATATATATATGTGTATATATATATATACACACATATATATATACACATATATATGTGTGTGTGTGTGTATATATATATATAAAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6136:HG4_PB_HySA_26378:HG4_PB_pbsv_18129:HG2_PB_HySA_33002:HG2_PB_pbsv_18203:HG3_PB_HySA_27300:HG3_PB_pbsv_17886:HG4_PB_SVrefine2Falcon1Dovetail_11309:HG3_Ill_SVrefine2DISCOVARDovetail_12860:HG2_PB_SVrefine2Falcon2Bionano_8949:HG4_PB_SVrefine2PBcRDovetail_9129:HG4_Ill_SVrefine2DISCOVARDovetail_12650:HG2_PB_SVrefine2Falcon1plusDovetail_5733;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6136:HG4_PB_SVrefine2PBcRDovetail_9129:HG4_Ill_SVrefine2DISCOVARDovetail_12650:HG2_PB_SVrefine2Falcon1plusDovetail_5733;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0626223;ClusterMaxSizeDiff=0.0587084;ClusterMaxEditDist=0.255319;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=250;DistBack=25595;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=147;REFWIDENED=19:47256561-47256707;PctSeqSimilarity=0.9895;PctSizeSimilarity=1;PctRecOverlap=0.8645;SizeDiff=0;StartDistance=-34;EndDistance=-34;GTMatch=0;TruScore=95;MatchId=2641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:37:0|1:44:6:3:23:1|0:0:7:8:0:0/1:13:6:./.:.:.:.:.:.
chr19	47336745	HG2_PB_PB10Xdip_15899	A	AACCCACCTCTCCCCGTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCTCTCCCCGTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCTCTCCCCTCTCCCTCTCCTCTCCCGTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCCTCTCATGCCGAGCCAAAGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTTTTTTTTTTGGTGGAGATGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTTGCTACAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATATGAGGAGCCCCTCTGCCTGGCTGCCCAGTGTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGAAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCACCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAACCCTGTCTGGGAGGTGAGGAGTGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCTGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGGGGGGTGGTCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTTTGCCCGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAACCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGTTCAACCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTTCCGGCCGGCTGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGAACAGCCCCCCGCCCGGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGCAGGGCGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCTGGGAGGTGAGGGGCGCTTCTGCCGGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTGTGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAAAAAAAAAAAAAGAATTTGAACCAGAAATTCAAGAGCAAAACCCTCTATATTCGTAGCTGGATTCTGCAGGCTTCTAATATTTATTGCCACCAGCTAAAAACATTCTCAAACCCTGAAGCAAATGAGAAAGGAGAGAGTGTTATTGTTGGTCTGTTTTCTCTAGTAAACTAGTTTACAAGATGGGTAAGCTATCATTTAGGCTTACTACTGAACCAATTTTAAAAAATGATTATATTATTTACAAATCAGAAAAAAACAAAACAATTTTGAATAAAAGATCCAACTTATTTTATCCTAAAAAAAAAAAAAAAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5280:HG2_PB_PB10Xdip_15899:HG2_PB_SVrefine2Falcon1plusDovetail_5734:HG2_PB_assemblyticsfalcon_12652:HG4_PB_SVrefine2Falcon1Dovetail_11310:HG2_PB_HySA_33004:HG3_PB_assemblyticsfalcon_12675:HG2_PB_assemblyticsPBcR_12261:HG2_PB_SVrefine2PB10Xhap12_13281;NumClusterSVs=9;ExactMatchIDs=HG2_PB_PB10Xdip_15899;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0419746;ClusterMaxSizeDiff=0.0419746;ClusterMaxEditDist=0.0537984;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=3395;DistBack=5;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4510;REFWIDENED=19:47336732-47326972;PctSeqSimilarity=0.9934;PctSizeSimilarity=0.9881;PctRecOverlap=0.9878;SizeDiff=-41;StartDistance=10;EndDistance=10;GTMatch=0;TruScore=98;MatchId=2642.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:35:0|1:18:2:0:22:0|1:14:0:0:7:0/1:23:6:0/1:123:281:.:3363:.
chr19	47922787	HG2_PB_SVrefine2Falcon1plusDovetail_5738	T	TCTCTGTGGTCACATCCGGAAGTTCCACGGCGGAGATGCTTAACCCACTGTCCGCCGAAGCGAGCGGACGGCGGGGCGGGGCGGGGCTGGAGCTGCGGGTCCCTCCCTCCCCTCCCCTCCTCCTCCCTCCCTCCCCTCCTCCCCTCCTCCCTCCCTCCCCTCCCTCCCTCCTCCCTCCCCTCCCTCTCCTCCCTCCCCTCCCCTCCCTCCCCTCCCCTCCTCCCTCCCCTCCTCCCCTCCCTCCTCCCTCCCTCCCCCTCCCCATCCGCGCCCCGCCCCGCCCCGCCCGGGCCCGCGGGCCTCTCCCGGCGGCTTTTGTATCGGAGTCTCCCTGAGACTCGTCCTCCTCGGCCCCCGCCCCTCCCGCCGCGCTCGCTCCGGGTCGCTCTCCCCCACCCCGCTCGGGGTCTCCCTCTCCCCCTGCCGGCAGCCACCCGCCTCTGTCTCTCTCACCCCCTCCTCTCTCTCCTCTTCTCTCTCTCTCTGTCTCTCTCCCTCTCTCTCTCCCCCACCCTGTCTCTTTTCTTTCTCATTTTCTCTGTTTTTCTGTGTCTTCTCCCACCTCTTCCCGCCTCTCTCTCCCTGTTTCTCTGTCTCTCCCTCAACCCCCAACCTCTCTCCCTGTTTTTTCTCTCTCCCCGCTTACCTCTCTCTCCTGTCTCTCCCCACCTCTCTCTCTCCCTCTGTTTCTCTCTCTCCTCTCTCTCTCCCCTCCACCTCCCATTTTCTCTGTTTCTCTCCCCCTCACCTCTCTCCCTCTGTCTCTCTCTCCCTCTCACCTCTTTGTTTTTCTCTCTCTTTTTTTCTGTTTCTCCCTCCTCCCACTTCTACCCCCCTCTCCCCGTCTCTCTGTTTCTGTGGCTCTCCCTCTCCTCCATCTCGCTCCGTTTCTCTCTTCCCCTTACCTCTCTCTCTCCCCACCTCTCTCCCTCTGTTTCTCTCCCCCCTAACTCCCACTCGCTCTGTTTCTCTCCCCCTCACCTCTCTCTCTCTGTCTCTCCCCCTCACCTCTCTCTCTCTGTCTCTCTCTCCCCCTCACCTCTCTCTCTGTCTCTCTCTCCCCTTACCTCTCTCTCTGTCTCTCCCCCCTCACCTCTCTCTCTGTCTCTCCCCCTCACCTCTCTCTCTGTCTCTCTCCCCCTCACCTCTCTCTCTGTCTCTCCCCCTCACCTCTCTCTCTGTCTCTCCCCCCTCACCTCTCTCTCTGTCTCTCCCCCTCACCTCTCTCTCTGTCTCCCCCCTCACCTCTCTCTCTCTGTCTCTCCCCCTCACCTCTCTCTCTGTCTCTCCCCCTCACCTCTCTCTCTGTCTCTCTCCCCCTCACCTCTCTCTCTGTCTCTCCCCCCTCACCTCTCTCTCTGTCTCTCTCCCCTCACTCTCTCTCTGTCTCTCCCCCTCACCTCTCTCTCTGTCTCTCCCCCCTCACCTCTCTCTCTGTCTCTCTCCCCTCACCTCTCTCTCTCTCTCTCCCCCCTCACCTCTCTCTGTCTCTCTCCCCCACCTCCCTGTCTCTCTCTCCCCTTACCTCTCTCTCTCTGTCTCTCTCCCCCTCACCTCTCTCTGTCTCTCTCCCCCTCACCTCTCTCTCTCTCTGTTTCTCTCTTTCTCCCTTTCCCCACCTCTCTCCTATGGGACAGGATCAGAGGAGAGGACAGGAGGCCAGAAGGAAGCCAGAGCTTAGATTTTAGCTTCTCTTCTTGCCCTCACCCCTTTCCCTCCCTCCTCTGGGAGACGGGCCCCTGTGCCTGCGCCTGTGTGTGTGTGCTTGCATGTGTGTGTGTATTGTGTGTGGTGTGTATGTGCCTTGTGTGGTGTGTTTTGTGTGTGTGGTGTATTTTGTATGTGTGGTGTGTGGTGTCTGTGTGGTGTGTGTGTGGTGTGTGTATGTGGTGTGTGTGGCGTATATGTTGTGTGTGCACGTGTGTGTGTGCGTGGTGTCTGTGTTTTGTGTGTGTCGTGTGTTTTGTATGTGTGGTGTACTTGTTTTGTGTGTGTGGTGTGTGCATGTGGGGTGTGTGTGTGTGTGTTGTATGTTTTGTGTGGTGTGTAGTGTGTTTTGTGTGGTGTGTGTTTTGTGTGGTGTGTGTGGTGTGTGTTTTGTGTGTGTGGTGTGTGTGTGCGTACCTGTGTTGTGTGTGTGAGTACCTGTGTGTGCGTACCTGTGTTGTGTTGTACCTGTGTTGTGTGTGTGTACCTGTGTGTACGCATACCTGTGTGGTGTGCGATTTTTTTTGTGTGTGTGGTGTGTGTTTTTGTGTGTGTGGTGTGTGTTTTGCATGTGTGGTGTGTATGGTGTGTGTGGCGTGTGTGTGTGTGCATAACTGTGTGGTATGTGTGGTGTGTTTGTGTGGTGTTGTTTGTGTGTGTGGTGTGTGTTTGTGTGGTGTGTGTAGTGTTTTTTTGTGTGTCGTGTGGTGTATGTGGCATGTGTGTGTGGCATGTGTGTGCGTACCTGTGTGGGGTGTGTGTGGTATGTGATGTGTGTGTTACTGTGTGGTGTGTTTTGTGTGCGTGGTGTGTGTGGTGTGCGTGTGTGCTGTATGTGTGGTGTGTGCGTACCTGTGTGGTGTGTGTTGTATGTGGTGTGTGTTTTTTGTGTATGGTGTGTTTGTGGGTGTGGTGTGTGTTTTTTGTGTGTGGTGTATGTGTGGTGTGTGCGTACCTGTGCGGTGTGTGTTGCATGTGGTGTGTGTTTTTTGTGTATGGTGTGTGTGGGGGGTGTGGTGTGTGTTTTGTGTGTGTGGTGTGTGTGTGGTGTGTGCATACCTGTGTGGTGTGCATGTGGTGTGTGGTGTGTTTTTTGTGTGTGGTGTGTGGGATGTGGTGTGTGTGTGTGCTTACCTGTGTGGTGTGCGTGTGGTGTATGCTGTGTGTGTTTTTTGTGTGTGGTGTGTGTGTGTACCTGTGTGGTGTGTGGTGTGTGTGTTTTGTTTGTGTGGTGTGTAGGAGTTACTGCGCGTGTTGTTTCTGTCTCTGGATGTGTGGGTACTGGAGGCCCCTCTGCCGTCTTGGGCCCCTGTCTTGAGCCTGTGGCCCCCTCAGCTGCTCACAAGGAGTCCGTGGGACTGCAGTCTGTGGGGTAAACCTGGGCCCCCACACAAGGTGTTGGAGGGCAGGGCCGCGGCTTTCATCGGATTCCTAAGGCGAACTTTCAACCTGGCGTTCTGAGATCAAGAAAAAGATTCATGCAACAGCAACTTCTTGAGCACCTACTATGTTCCAGGTGGTGTTCTGGGGACTAGCAGGGAACAAAAGGCAAACTTCTTGGTCTTATGGCTCTCACTTTTCCCTGGGGATGGGGTAGGGAAGGGAGGGTAGTCGAGTAAATGGATGCATAAATATTAACTAGTGCCTGGAGATGGCCCATGCTCCGAAACAAAGCTGTGTAAGAACGGTGGGGGGAGGGCGGCTTCTGTAGACTGGACAGGGACAGCCCTCAGAGGAGGCGACATCTGAGCCGTGCACACACCAGGGAAGAGCATTCCAGGCAGGGGGAATGGCAGGTGCAAAGACTGGAAAGGTCGGGGGAGCAGAAGGTGCTTGGTGTGTCCAGAAAACATCTAAGAGGCTATTGAGGGAGGGGGCGAGGGGTCTGGGGAGACCCTTGGATTCATTCTCCCCATGGCATCTTTTACATTGGGGTCTTTCATCCCTGGTGTCTTCAGCTTCCCGCGGGGGTGTAGAGGTGGCTGTCAGGAGACCTGTGAACCCAGGGGAAAGTTCCCTGGGAAATTGTGGACTGGGTGCTTCTGTGTTTTTCCCCAGGGAAGTGGCCCATAGCTTTTATCCCATTCCCACAGAGGGATACTTGACCCCCACAAAATCCTGAAACGTCACCCCAGAGGAATAGTGCCAAAGAAAAATGGGACAGAGATCCAGAGACAAGGGGACAGGGATGCGGGGAGGGGAGGACAAGGACCCTGGTGGGGGTGGGGGTACAGAGATGTAGAGACAGAGGGGACAGATCCAGAGAGAGGGGGACAGACCTAGAGAGAGGGGTCAGACCCAGAGAGAGAGGGATACAGACCCAGAGACAGAGGGAAATAGAGACCCCGGGAGAGGGCTGGAGGCAGCTCTAAGGACGTAGTTCAGAACTTTCATCAACAGCGCTACCTCTGCTGCCACCTGCTTCTCCGCCCTCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11313:HG2_PB_HySA_33015:HG2_PB_SVrefine2Falcon2Bionano_8952:HG2_PB_SVrefine2PBcRplusDovetail_5283:HG2_PB_SVrefine2Falcon1plusDovetail_5738:HG3_PB_assemblyticsfalcon_12683:HG2_PB_PB10Xdip_15904:HG2_Ill_breakscan11_4859:HG2_PB_SVrefine2PB10Xhap12_13284:HG2_PB_SVrefine2PBcRplusDovetail_5284:HG2_PB_SVrefine2Falcon1plusDovetail_5739:HG3_PB_SVrefine2Falcon1Dovetail_11298;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5738;NumExactMatchSVs=1;ClusterMaxShiftDist=0.166389;ClusterMaxSizeDiff=0.163949;ClusterMaxEditDist=0.185608;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=4141;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=19:47922788-47922787;PctSeqSimilarity=0.9918;PctSizeSimilarity=0.9881;PctRecOverlap=0.9881;SizeDiff=-50;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=98;MatchId=2643.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:0:15:1:15:1/1:0:15:0:12:1/1:0:32:1/1:0:439:.:4854:.
chr19	48352905	HG2_PB_PB10Xdip_15905	A	AGAGAGAGAGAGGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	20	PASS	ClusterIDs=HG4_PB_pbsv_18137:HG4_Ill_GATKHC_28604:HG2_PB_pbsv_18210:HG2_PB_HySA_33021:HG2_PB_PB10Xdip_15905:HG2_PB_assemblyticsPBcR_12274;NumClusterSVs=6;ExactMatchIDs=HG2_PB_PB10Xdip_15905;NumExactMatchSVs=1;ClusterMaxShiftDist=0.235294;ClusterMaxSizeDiff=0.235294;ClusterMaxEditDist=0.264706;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=1444;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=19:48352880-48352945;PctSeqSimilarity=0.9455;PctSizeSimilarity=0.8481;PctRecOverlap=0.4684;SizeDiff=-12;StartDistance=-36;EndDistance=-36;GTMatch=0;TruScore=75;MatchId=2644.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:34:./.:12:14:1:16:./.:4:5:5:5:0/1:13:5:./.:.:.:.:.:.
chr19	48546787	HG2_PB_HySA_33027	C	CCACCACCACCATCATCATCACCATCATCAACATCATCATCATCACACCATCATCACCACCACCACCACCATAACCACCACCACCACCATCACCACCATCACCACCATCACCCACACCACCACCTTCATCATCACCACCATCACCATCACCACCATCACCACCACCACCACTACCACCACCATCATCACCAGCACCACCATCACCATCACCACCATCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCATCACCATCACCACCACCATCACCACCACCACTCAACACCATTACCACCACCACCACTACCACCACCCATCAATACCACCATCAACCACCACCATCATCATCACCATCACCACCATCATCACCACCACCATCACCACCATCACCATCACCATCACCCACCATCATCATCACCACCATCACATCACCACACCACCATCATCACCACCATCACCACCAGCACCACCACTATCAACATCATCATCATCACCACCATCAACACCATCATCACCAACACTGTCATCACCACCACCACCACCATCACCACACCATCACCACCATCTCACCATCACCATCACCACCAATCATCACCACCACCATCCACCACACCATCATCACCATCACCACATCATCATCACCACCATCACCACCACCATCACCACCACCATCACCATCACCATCACCACCACCACCATCACCACCAGCACCACCAGCACCACACCATCAACATCATCATCATCACCATCACCACCATCACCACACCGTCATCACCACCAGCACCACCATCACCACCACCATCACCACCATCTCACCATCATCACATCACCACCATCATCACCACCACCATCACCACCACCATCACCATCACCATCACCACCATCTCACCATCACCATCACCACCATCATCACCACCACCATCACCACCACCATCATCACCATCACCACCATCATCATCACCACCATCACCACCACCATCACCGACCACCATCACCATCACCATCACCACCAACCACCATCACACCAGCACCACCAGCACCACCACCATCAACATCATCATCATCACCATCACCACCATCATCACCACCACTGTCATCACCACCAGCACCACCATACCACCACCATCACCACCATCTCACATCATCACCATCCCACCACCATCATCACCACCACCATCACCACCACCATCACCATCACCCATCACCACCATCTCACCATCCACCACACCACCATCATCACCACCACCATCACCACCACCATCACCATCACCATCACCACCATCATCATCCACCACCATCACCACCACCACACCACCATCATCACCATCACCACCCAGCACCACCACCAACATCATCATCATCACCACCACCACCACCATCACCACCACACCACACATCAACACCACCATCACCACCACCATCATCATCACCACCACCACCATCACCACCAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9130:HG4_PB_pbsv_18138:HG2_PB_HySA_33028:HG3_PB_pbsv_17893:HG4_PB_assemblyticsfalcon_12487:HG4_PB_SVrefine2Falcon1Dovetail_11315:HG2_PB_PB10Xdip_15921:HG4_PB_HySA_26394:HG2_PB_SVrefine2PB10Xhap12_13288:HG2_PB_pbsv_18212:HG2_PB_HySA_33027:HG3_PB_SVrefine2Falcon1Dovetail_11301:HG3_PB_SVrefine2PBcRDovetail_8900:HG2_PB_SVrefine2PBcRplusDovetail_5286:HG3_PB_assemblyticsfalcon_12692;NumClusterSVs=15;ExactMatchIDs=HG2_PB_HySA_33027;NumExactMatchSVs=1;ClusterMaxShiftDist=0.348515;ClusterMaxSizeDiff=0.348515;ClusterMaxEditDist=0.361311;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=1465;DistBack=-26;DistForward=5;DistMin=-26;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=37;REFWIDENED=19:48546777-48546813;PctSeqSimilarity=0.9874;PctSizeSimilarity=0.9952;PctRecOverlap=0.9959;SizeDiff=7;StartDistance=-3;EndDistance=-3;GTMatch=1;TruScore=99;MatchId=2645.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:71:1/1:3:25:1:20:1/1:0:15:0:12:1/1:0:10:1/1:7:334:2182339:.:.
chr19	49111949	HG2_Ill_MetaSV_2350	T	TGCCTTGGCCTCCCAAAGCGCTGGGATTACAGGTGTGAGCCACCACACCTGGCCCTTTTTCTTTTTCCTTTTCCTGAATTATCTGCTATGAAAACTGTGCGTTGTTGTTTTTTGTTGTTGTTGTTGTTGTTGTTTTTGTGAGACGGAGTCTTGCTGTGTCTCCCAGGCTGGAGTGCAGTGCTGTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCACCCACCATCATCCCGGCTAATCTTTGTATTTTTGTAGAGACGGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5740:HG4_PB_assemblyticsfalcon_12488:HG3_PB_HySA_27317:HG2_PB_HySA_33034:HG2_PB_PB10Xdip_15930:HG3_Ill_manta_3953:HG3_Ill_MetaSV_2498:HG3_Ill_GATKHCSBGrefine_11766:HG2_Ill_MetaSV_2350:HG2_Ill_GATKHCSBGrefine_11896:HG3_PB_pbsv_17896:HG3_Ill_Spiral_18418:HG2_Ill_Spiral_1174:HG2_PB_pbsv_18216:HG3_PB_SVrefine2Falcon1Dovetail_11302:HG2_PB_SVrefine2PB10Xhap12_13289:HG3_Ill_SVrefine2DISCOVARDovetail_12871:HG3_PB_SVrefine2PBcRDovetail_8902;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11896:HG2_Ill_MetaSV_2350:HG3_Ill_GATKHCSBGrefine_11766:HG3_Ill_MetaSV_2498:HG3_Ill_manta_3953;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0642458;ClusterMaxSizeDiff=0.0641562;ClusterMaxEditDist=0.222826;PBcalls=10;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=365;DistBack=-45;DistForward=53;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=281;REFWIDENED=19:49111714-49111994;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2646.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:26:0|1:18:1:1:25:1|0:0:6:9:0:0/1:15:14:0/1:7:35:2182339:.:.
chr19	49327480	HG2_PB_SVrefine2PBcRplusDovetail_5287	C	CCAGCCTGGGCAACAGAGCGAGATTCCATCAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATGTTAAACATTGAACCACAAGTAAAAGTCAAGAAAAAAAGAAAGAAGGCCAGGTATGGTGGCTCACGCCTGTCATCCTAACACTTTAGGAGGCCAAGGCAGGAAGACAGTTTGAACTCAGGAGTTCAAGAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_15932:HG2_PB_pbsv_18218:HG4_PB_HySA_26396:HG4_PB_pbsv_18140:HG3_PB_pbsv_17898:HG3_PB_HySA_27322:HG2_PB_SVrefine2Falcon1plusDovetail_5741:HG3_PB_SVrefine2Falcon1Dovetail_11303:HG3_Ill_manta_3954:HG3_Ill_GATKHCSBGrefine_11768:HG4_PB_SVrefine2PBcRDovetail_9131:HG4_PB_SVrefine2Falcon1Dovetail_11316:HG4_Ill_SVrefine2DISCOVARDovetail_12660:HG4_Ill_MetaSV_2428:HG4_Ill_GATKHCSBGrefine_12285:HG3_PB_SVrefine2PBcRDovetail_8903:HG3_Ill_SVrefine2DISCOVARDovetail_12875:HG2_PB_SVrefine2PBcRplusDovetail_5287:HG2_PB_SVrefine2PB10Xhap12_13290:HG2_Ill_SVrefine2DISCOVARplusDovetail_6150:HG2_Ill_MetaSV_2351:HG2_Ill_GATKHCSBGrefine_11897:HG2_10X_SVrefine210Xhap12_12686;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12686:HG2_Ill_GATKHCSBGrefine_11897:HG2_Ill_MetaSV_2351:HG2_Ill_SVrefine2DISCOVARplusDovetail_6150:HG2_PB_SVrefine2PB10Xhap12_13290:HG2_PB_SVrefine2PBcRplusDovetail_5287:HG3_Ill_SVrefine2DISCOVARDovetail_12875:HG3_PB_SVrefine2PBcRDovetail_8903:HG4_Ill_GATKHCSBGrefine_12285:HG4_Ill_MetaSV_2428:HG4_Ill_SVrefine2DISCOVARDovetail_12660:HG4_PB_SVrefine2Falcon1Dovetail_11316;NumExactMatchSVs=12;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.16317;PBcalls=13;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=203;DistBack=7443;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=22;REFWIDENED=19:49327481-49327502;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:1:18:0:26:./.:0:12:1:11:1/1:0:16:./.:.:.:2182339:.:.
chr19	49672648	HG2_PB_PB10Xdip_15936	C	CTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGATGCCCGCCACCACACCAGGTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGATCTTGAGCTCCTGACTTCAGGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGTGATTACAGGCGTGAGCCATCGCACCTGGCCTACACATTTTTCATGACCATCCTTTTAGGTTCAAACTTCTCTATCTTGCTTATTCTCCTAATTGCTGCATGATCTTCCTTAGTAAAGATGTACCCTCTGCTTTTTCTTTTTTGAGACTGGGCCTCTCTGTCACCCAGGCTGTGTGCAATGGCACGATCATGGCTCACTGCAGTCTCAACCTCCCCAGGCTCAGGTGATCCTCCCACCTCAGCCTCCTGAATAACTGGGACAATAGGCACATGCCACCACACTGAGCTAATTTTTGTATTCTTTGTAGAGAGGAGGTCTCCCTATGTTGCCCAGGCCAGTCTTGAACTCCTAGGCTAAAGTGGTCCATCAACCTTGGCCTCCCAAAGTACTAGGATTACAGGCGTGAGCCACCGTGCTTGTCCCCATCTGTTATTTAAAAATTTCCCCAATCTAAGGCCAGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGAAGATCACCTGAGGTCAGGGGTTCAAGCCCAGCCTGGCCAACATGGTGAAACCCATCTCTGCTAAAAATACAAACAATTAGCAGGGCATGGTGCCGCGTGTCTGTTATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTTCCTCTTAAAAAAAAAATTCCCCAATCTAATCTTTCATGGGATTACAGTTTAAAAAATAAATAAATAAAAATTTCCCAGTTGATGGATATCTAAGGTTTACTAATGTTTGACACTACAAATGATGCTGAATAAAATGTCTTTTTTTTCTTTTTTTTTGAGATAGGGTCTCACTCTGTCACGCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGCTCAAGGGATCCTTCCACCTCAGCCTCCTGAGTAGCCAGAACCACAGATGCACATCACCACACCACGCCCAGCTAATTTTTTGTATTTTTGGTAGAAGCGGTGTTTTGCCGTGTTGCCCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGATCCACCTACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCATCGCGCCCAGCAACAAAATGTAAAAAGCGACTTTTATATAGTGTCTATTGCTATAAAAAGTCCTATCGTTTTTATGGGGTTAGATATAGCTTTTGTCTCTTTCATGACCCCTTGGCTGCCTGTCTTAGAAAGGCTCATCCCACTCCAAGACAAATATTCTCCTAAGTCATCTTTTAATATCTCATAGTTTTATATTTAAACCCTTTAATCCATCTGGAAATGATTTTTACATATTTTGAGGTCAGGAGTCTGTATTTCTGTTCATCCAAATGAGAAGCTATGTTTTCTTTATGACCATTTAATAAATAAACCATCCTTTCCTAGCTGAATAGAAATTCTTGTGGTTGTGTATTCAGATCCTTTATCTGTTGAAATCTGTTTTTTGTTTTTCTGTTTTTTTGTTTTTGTTTTTTTTTTTTGCATTTCTCTACTTTTATATTCCTGGGGCCAAACTATGCTTTGATTACAGCAGTTTAAAGACGTTTTAAGGCTAAGTGTGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCCCAGGCGGGTGGATCACTTGAACTCGGAATTCAAGACCAGCCTGGCAACATAGTGAAACCCCATCTCTACAAAAAAAATTTAAAAAAATTGCCAGGCATGGTGGCACATGCCTGTGGTCCCAGCTATTGGGGAGGCTGAGGTGGGAGGATCACTTGAGTTCAGGAAGTCAAGGCTGCAGTGAGCCGAGAAGGTATCTCTGCACTCCAGCCTGGGTGACAGAGTGAGACCTGTCTCAAACATAAAAGTAAATAAGTAAATAAATAAATAAATAAAGATGTTTTAATATATGTTAGTGAAAGCTCCTTCTCACTGTCCTTTCTGAAAAATTTATTGGCTCTTCTCTGACACTTATTTTTCCATATGAAGTTTAAACTTATTCTATTCTATTCAAAATAGGATAAACACCTCCAAACTTCCCCTCAACCCCCCTCTTTCTCCAGCCTGTATTGAATTTATGTGTTAATTTGTGACAAGTTGACTTACTGTTAGTTTTTCCATTTATTACACCTGTCCTTAAATAAGATTTGTAAGATTCCTCATAAATATCCTGTACCTTTCTGGATGAATTAATTCCCAGGTATCTCATAATTTTCTTTCTTTCTTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTGAGACAGGGTCTCTCTCTATTGCCCAAGCTGGAGTGCAGTGGTGCAGTCACAGCTTACTGCAACCTCTGCCTCCTGGGCTCAAGTGATTCTCCCGCCTCAGCCTCCTGAGTATGTGGGACCACAGGCATGTGGCACAATGCTCGGCTAATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCAAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5745:HG2_PB_HySA_33047:HG2_PB_PB10Xdip_15936:HG2_PB_HySA_33046:HG2_10X_SVrefine210Xhap12_12691:HG2_PB_SVrefine2PBcRplusDovetail_5292:HG2_PB_SVrefine2PB10Xhap12_13298;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_15936;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0591161;ClusterMaxSizeDiff=0.038937;ClusterMaxEditDist=0.101575;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=2753;DistBack=1508;DistForward=181;DistMin=181;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=308;REFWIDENED=19:49672532-49672839;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9985;PctRecOverlap=0.9985;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:40:0|1:15:0:1:20:1|0:0:8:19:0:0/1:26:17:0/1:83:209:2182339:3015:.
chr19	49676103	HG3_Ill_250bpfermikitraw_23160	C	CTTCTCACCTGTCCATCCACACATCCACTGACAATTCCATTCACTCATTCTTCCATCCATCCATG	20	PASS	ClusterIDs=HG3_Ill_250bpfermikitraw_23160:HG3_PB_HySA_27327:HG2_PB_HySA_33048:HG2_PB_PB10Xdip_15937:HG2_PB_pbsv_18226:HG3_Ill_Spiral_18421:HG3_Ill_GATKHC_28528:HG3_Ill_GATKHCSBGrefine_11772;NumClusterSVs=8;ExactMatchIDs=HG3_Ill_250bpfermikitraw_23160:HG3_Ill_Spiral_18421:HG3_Ill_GATKHC_28528:HG3_Ill_GATKHCSBGrefine_11772;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.227273;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=14;DistForward=35;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=37;REFWIDENED=19:49676102-49676141;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2649.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:27:0|1:17:1:1:25:./.:4:18:17:1:0/1:8:2:./.:.:.:2182339:.:.
chr19	49721410	HG4_PB_SVrefine2PBcRDovetail_9135	A	ATATATATGTATATATACACATATATTCGTATATATGCGTATATACACATATATTCGTATATATGCGTATATACACATATATTCGTATATATGCGTATATACACATATATTCGTATATATGCGTATATACACATATATTCGTATATATGCGTATATACACATATATTCGTATATATGCGTATATACACATATATTCGTATATATGCGTATATACACATATTCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5746:HG3_PB_assemblyticsfalcon_12705:HG4_PB_assemblyticsfalcon_12497:HG4_PB_SVrefine2Falcon1Dovetail_11321:HG3_PB_SVrefine2Falcon1Dovetail_11307:HG2_PB_HySA_33051:HG4_PB_pbsv_18149:HG4_PB_SVrefine2PBcRDovetail_9135:HG4_Ill_SVrefine2DISCOVARDovetail_12664;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5746:HG4_PB_SVrefine2PBcRDovetail_9135:HG4_Ill_SVrefine2DISCOVARDovetail_12664;NumExactMatchSVs=3;ClusterMaxShiftDist=0.108108;ClusterMaxSizeDiff=0.108108;ClusterMaxEditDist=0.189189;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=222;DistBack=35979;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=118;REFWIDENED=19:49721411-49721528;PctSeqSimilarity=0.9893;PctSizeSimilarity=0.991;PctRecOverlap=0.7354;SizeDiff=2;StartDistance=-58;EndDistance=-58;GTMatch=0;TruScore=90;MatchId=2650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:23:0|1:23:0:0:22:0|1:20:0:0:12:0/1:22:7:./.:.:.:2182339:.:.
chr19	50370889	HG2_PB_SVrefine2PBcRplusDovetail_5297	G	GCCCCTTCCCCGACTCCCGGCCCCCAGGGTCTCTCGGCAGCCCTGACCTTCATCTCTCTTGCTGCAACGC	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_12688:HG3_PB_HySA_27334:HG4_PB_HySA_26404:HG3_PB_pbsv_17912:HG2_PB_HySA_33072:HG2_PB_PB10Xdip_15957:HG4_Ill_svaba_22307:HG3_Ill_svaba_22557:HG2_Ill_svaba_22331:HG4_PB_assemblyticsfalcon_12504:HG4_PB_SVrefine2PBcRDovetail_9137:HG4_Ill_manta_4108:HG4_Ill_SVrefine2DISCOVARDovetail_12667:HG4_Ill_Krunchall_24525:HG4_Ill_GATKHC_28625:HG4_Ill_GATKHCSBGrefine_12293:HG4_Ill_250bpfermikitraw_23488:HG4_Ill_150bpfermikitraw_22602:HG3_PB_SVrefine2PBcRDovetail_8909:HG3_Ill_SVrefine2DISCOVARDovetail_12878:HG3_Ill_Krunchall_23751:HG3_Ill_GATKHC_28535:HG3_Ill_GATKHCSBGrefine_11776:HG3_Ill_250bpfermikitraw_23165:HG3_Ill_150bpfermikitraw_22490:HG2_PB_SVrefine2PBcRplusDovetail_5297:HG2_PB_SVrefine2PB10Xhap12_13304:HG2_Ill_scalpel_16880:HG2_Ill_manta_4838:HG2_Ill_SVrefine2DISCOVARplusDovetail_6157:HG2_Ill_Krunchall_24184:HG2_Ill_GATKHC_28630:HG2_Ill_GATKHCSBGrefine_11903:HG2_Ill_250bpfermikitraw_23839:HG2_Ill_150bpfermikitraw_22475:HG2_10X_SVrefine210Xhap12_12701;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12701:HG2_Ill_150bpfermikitraw_22475:HG2_Ill_250bpfermikitraw_23839:HG2_Ill_GATKHCSBGrefine_11903:HG2_Ill_GATKHC_28630:HG2_Ill_Krunchall_24184:HG2_Ill_SVrefine2DISCOVARplusDovetail_6157:HG2_Ill_manta_4838:HG2_Ill_scalpel_16880:HG2_PB_SVrefine2PB10Xhap12_13304:HG2_PB_SVrefine2PBcRplusDovetail_5297:HG3_Ill_150bpfermikitraw_22490:HG3_Ill_250bpfermikitraw_23165:HG3_Ill_GATKHCSBGrefine_11776:HG3_Ill_GATKHC_28535:HG3_Ill_Krunchall_23751:HG3_Ill_SVrefine2DISCOVARDovetail_12878:HG3_PB_SVrefine2PBcRDovetail_8909:HG4_Ill_150bpfermikitraw_22602:HG4_Ill_250bpfermikitraw_23488:HG4_Ill_GATKHCSBGrefine_12293:HG4_Ill_GATKHC_28625:HG4_Ill_Krunchall_24525:HG4_Ill_SVrefine2DISCOVARDovetail_12667:HG4_Ill_manta_4108:HG4_PB_SVrefine2PBcRDovetail_9137:HG4_PB_assemblyticsfalcon_12504;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.181818;PBcalls=11;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=69;DistBack=14580;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=19:50370890-50370958;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:1:29:1:12:./.:1:14:1:3:1/1:0:43:./.:.:.:2182339:.:.
chr19	50687904	HG2_Ill_SpiralSDKrefine_7975	A	AAGTATATACATACATGAATATATATATACAAGTATATATATATTCATGTATGTATATACTTGTATATATATACG	20	PASS	ClusterIDs=HG4_PB_pbsv_18159:HG4_PB_HySA_26407:HG4_Ill_scalpel_16512:HG3_PB_pbsv_17914:HG3_Ill_Spiral_18428:HG3_Ill_GATKHC_28538:HG3_Ill_GATKHCSBGrefine_11778:HG2_Ill_scalpel_16883:HG2_Ill_SpiralSDKrefine_7975:HG3_PB_HySA_27336;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SpiralSDKrefine_7975:HG2_Ill_scalpel_16883:HG3_Ill_GATKHCSBGrefine_11778:HG3_Ill_GATKHC_28538:HG3_Ill_Spiral_18428;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0671141;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.300654;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=-1;DistForward=12;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=8;REFWIDENED=19:50687903-50687913;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2652.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:37:1|0:2:34:19:1:./.:2:16:6:7:0/1:7:14:./.:.:.:.:.:.
chr19	51287850	HG2_PB_SVrefine2Falcon1plusDovetail_5760	A	AGGGAGGGAGGGAGGGGAGGAGAGGAAGGAAGGGGAAGGGAGGGGGAGGGTGGGAGGGAGGGCAGGGCAGGGAGGGGAGAGGGGGAGGAGGGAGGTGAGGGCAGAGGAGGGGAGAGGGGAGGAGGGAGGGGAGGGCAGAGGAGGGGAAGGGAGAGGGGAGAGGAGGGGTGAGGAGGAGAGGAGAGGGGAGGGGAAGGGGACGGGGAGAGGGAGGGGAGGGCAGAGGAGGGGAAGGGGAGGGAGGGGAGGGGAGGAGAGGAGGGGGAGGGAGGAGGGGAGGGGAGGGGGAGGGAGGGGGGGGGAGGGGAGAGGGGAGGAGGGAGGGGAGAGGGGGAGGGGAGGAGGGAGGGGAGGGGAGGGGAGGAGGGAGGGGGAGGGGAGGGAAGGGGAAGGGGAGAGGGGGAGGAGGGGGGAGGAGGGAGGGAGGGGAGGGGGGCGGGGAAGGGGGGGAGGGGAGGGAGGGGGAGGGGGAAGGGGGAAGGGGAGGGGGAGGGGAGGGGAGGGAAGGGGGAGGAGGGGGGAGAGGGGGAGGGAGGAGGGAGAGGGGGAGGAGGGAGGGGGAGGGGGGAAGGGGAAGGGGGAGGAGGGAGGGGAGAGGGAGGGGGGAGGGGAGAGGAGAGGAGGGGGAGGGGGAGGGGTGGCGGAGG	10	PASS	ClusterIDs=HG3_PB_pbsv_17928:HG2_PB_assemblyticsfalcon_12703:HG4_PB_assemblyticsfalcon_12523:HG2_PB_PB10Xdip_15974:HG2_PB_SVrefine2Falcon1plusDovetail_5760:HG2_PB_SVrefine2PB10Xhap12_13315:HG2_PB_SVrefine2Falcon2Bionano_8961:HG3_PB_SVrefine2Falcon1Dovetail_11317:HG2_PB_HySA_33097:HG3_PB_SVrefine2PBcRDovetail_8924:HG4_PB_SVrefine2Falcon1Dovetail_11332:HG2_PB_SVrefine2PBcRplusDovetail_5305:HG3_PB_HySA_27351:HG2_PB_pbsv_18248;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5760;NumExactMatchSVs=1;ClusterMaxShiftDist=0.106097;ClusterMaxSizeDiff=0.106097;ClusterMaxEditDist=0.21652;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=646;DistBack=-16;DistForward=16160;DistMin=-16;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=19:51287851-51287862;PctSeqSimilarity=0.939;PctSizeSimilarity=0.9969;PctRecOverlap=0.9969;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=97;MatchId=2653.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:32:1/1:1:16:0:14:./.:0:4:0:5:./.:1:5:./.:3:21:.:677:.
chr19	51314743	HG2_Ill_GATKHCSBGrefine_11912	G	GAGTGAGGTCTATCCCAGAGAGTGAGGACCATCCCAGTCAGTGAGGACTATCCCAGAGAGTGAGGACCATCCCAGTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4862:HG4_PB_HySA_26425:HG3_PB_pbsv_17929:HG4_PB_pbsv_18170:HG4_PB_HySA_26424:HG2_PB_pbsv_18249:HG4_Ill_GATKHCSBGrefine_12302:HG3_Ill_Spiral_18434:HG3_Ill_GATKHCSBGrefine_11783:HG2_Ill_SpiralSDKrefine_7987:HG2_Ill_GATKHCSBGrefine_11912:HG2_Ill_250bpfermikitraw_23859:HG2_Ill_150bpfermikitraw_22496:HG4_PB_assemblyticsfalcon_12524;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22496:HG2_Ill_250bpfermikitraw_23859:HG2_Ill_GATKHCSBGrefine_11912:HG2_Ill_SpiralSDKrefine_7987:HG3_Ill_GATKHCSBGrefine_11783:HG3_Ill_Spiral_18434:HG4_Ill_GATKHCSBGrefine_12302;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.27673;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=24;DistForward=31;DistMin=24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=155;REFWIDENED=19:51314625-51314779;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2654.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:18:0|1:26:4:2:14:1|0:0:12:13:0:0/1:16:13:./.:.:.:.:.:.
chr19	51417334	HG3_PB_HySA_27357	C	CTGTCGTCTGTCCATCTTTCTCTGTGTCTCTCTCCTCCCATCTCTGTCTCTGTCTCTCTGTCTGTGTCTCCGCACCTGTG	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_12709:HG2_PB_PB10Xdip_15975:HG2_PB_pbsv_18253:HG4_PB_HySA_26427:HG3_PB_HySA_27357:HG4_PB_assemblyticsfalcon_12530:HG4_PB_pbsv_18173;NumClusterSVs=7;ExactMatchIDs=HG3_PB_HySA_27357;NumExactMatchSVs=1;ClusterMaxShiftDist=0.1875;ClusterMaxSizeDiff=0.175;ClusterMaxEditDist=0.275;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=79;DistBack=6;DistForward=111;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1269;REFWIDENED=19:51416656-51417924;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9873;PctRecOverlap=1;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2655.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:37:1/1:4:13:2:7:./.:12:12:23:18:./.:0:6:./.:.:.:.:.:.
chr19	51462923	HG2_PB_SVrefine2Falcon1plusDovetail_5765	A	AGAGAGAGAGAAAAGAAGAAGATGAAGACGAAGGAGGAGAAGGAGGAAGGGGAGGAGAGGGAAGAGGGGAAGGAGAGGGAGGAGGGGAGGGGGAGGGGGTCAGGGAGATGGAGGAGGAGGAAGAGGAGGAGGAAAAGAGGGAGTGGAAGAGGAAGAGGAAGAAGGAGGGGGGAGGAGGGGAAGGAGAGGGAGGAGGGGAAGGAGAGGGAGGAGGGGGAGGGGAGAGGGAGAGGGAGGAGAGGAAGAGGAGAAGAGGCAGTGGAAGATGAAGAGGAAGAGGAAGAAGGAGGAGGAGGAAAAGAAGATGAATAAGAGGAGGAGGAGAAAATGAGGAAGAGGAGGAGGGGGAGGAGGAGGAGGGGAGGAGGGGAGGAGGGGGAGGAGGGCAGGAGGAGGGGGAGGGGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGAAGGAGGAAGAGGAGGAGGAGGAAGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8966:HG2_PB_pbsv_18255:HG3_PB_pbsv_17935:HG2_PB_PB10Xdip_15976:HG3_PB_HySA_27359:HG2_PB_SVrefine2PB10Xhap12_13321:HG2_PB_SVrefine2Falcon1plusDovetail_5765:HG3_PB_SVrefine2PBcRDovetail_8928:HG3_PB_SVrefine2Falcon1Dovetail_11321:HG2_PB_SVrefine2PB10Xhap12_13320;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5765;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0717489;ClusterMaxSizeDiff=0.0717489;ClusterMaxEditDist=0.185567;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=459;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=485;REFWIDENED=19:51462928-51463412;PctSeqSimilarity=0.9588;PctSizeSimilarity=0.9346;PctRecOverlap=0.9346;SizeDiff=30;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=94;MatchId=2656.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:5:26:1/1:0:7:3:14:1/1:0:7:1:26:./.:0:4:./.:3:33:.:.:.
chr19	51987936	HG2_Ill_Cortex_4012	C	CTCTCCCGGTCACTGTCTGTCCCCTTATGGATGAGTTAATGACCCTGTGTCGCACACCCG	20	PASS	ClusterIDs=HG2_PB_pbsv_18262:HG4_Ill_svaba_22338:HG4_PB_pbsv_18184:HG4_Ill_scalpel_16527:HG4_Ill_manta_4113:HG4_Ill_Krunchall_24551:HG4_Ill_GATKHC_28660:HG4_Ill_GATKHCSBGrefine_12305:HG4_Ill_Cortex_1678:HG4_Ill_250bpfermikitraw_23507:HG4_Ill_150bpfermikitraw_22626:HG2_Ill_svaba_22367:HG2_Ill_manta_4843:HG2_Ill_SpiralSDKrefine_8000:HG2_Ill_Krunchall_24217:HG2_Ill_GATKHC_28671:HG2_Ill_GATKHCSBGrefine_11918:HG2_Ill_Cortex_4012:HG2_Ill_250bpfermikitraw_23874:HG2_PB_assemblyticsfalcon_12722:HG2_PB_HySA_33128;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23874:HG2_Ill_Cortex_4012:HG2_Ill_GATKHCSBGrefine_11918:HG2_Ill_GATKHC_28671:HG2_Ill_Krunchall_24217:HG2_Ill_SpiralSDKrefine_8000:HG2_Ill_manta_4843:HG2_Ill_svaba_22367:HG4_Ill_150bpfermikitraw_22626:HG4_Ill_250bpfermikitraw_23507:HG4_Ill_Cortex_1678:HG4_Ill_GATKHCSBGrefine_12305:HG4_Ill_GATKHC_28660:HG4_Ill_Krunchall_24551:HG4_Ill_manta_4113:HG4_Ill_scalpel_16527:HG4_Ill_svaba_22338;NumExactMatchSVs=17;ClusterMaxShiftDist=0.112;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.224;PBcalls=4;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=3336;DistForward=10436;DistMin=3336;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=19:51987935-51987937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:15:0|1:32:1:1:14:0|1:31:0:1:33:0/1:25:27:./.:.:.:.:.:.
chr19	52045022	HG4_Ill_GATKHCSBGrefine_12306	T	TCAGACTGGGGCTCTGGCTGTGTCTGCAATGCCCAGGCCTGCTGCTGCCTCTGAGCAATGCACTCACTGCTCC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23875:HG4_PB_pbsv_18185:HG4_PB_HySA_26438:HG2_PB_pbsv_18263:HG2_PB_HySA_33129:HG4_PB_assemblyticsfalcon_12542:HG3_PB_pbsv_17944:HG4_Ill_Krunchall_24552:HG4_Ill_GATKHC_28661:HG4_Ill_GATKHCSBGrefine_12306:HG3_Ill_GATKHC_28572:HG2_Ill_Krunchall_24218:HG2_Ill_GATKHC_28673:HG2_Ill_GATKHCSBGrefine_11919;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23875:HG4_PB_assemblyticsfalcon_12542:HG4_Ill_Krunchall_24552:HG4_Ill_GATKHC_28661:HG4_Ill_GATKHCSBGrefine_12306:HG3_Ill_GATKHC_28572:HG2_Ill_Krunchall_24218:HG2_Ill_GATKHC_28673:HG2_Ill_GATKHCSBGrefine_11919;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0810811;ClusterMaxSizeDiff=0.0402685;ClusterMaxEditDist=0.304636;PBcalls=6;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=72;DistBack=46354;DistForward=50;DistMin=50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=80;REFWIDENED=19:52045016-52045095;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2660.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:25:0|1:25:3:0:20:./.:7:0:5:13:0/1:14:6:./.:.:.:.:.:.
chr19	53391719	HG2_10X_SVrefine210Xhap12_12730	CGTTAG	TGCTTGTAAACAATACAAGAAAGAAATAAAAAATCAATGCAGAGCTCCTGTTACAGAGATGCTTGAAACTTTTATGGACACACCAAGTGACATTCGGTATCTCGATGCTACACAGCATGAGTGACGTCTTCAAAGATGACAACGTCCACAGTTAAAGATCAGCTGGGCGCAGTGACATATGTCTGTAATCCCAGCTACATGGGAGGCTGAGGCAGGAGAATGGCTTGATCCTGGGAGGCAGAGGTTGCCGTGATCCCAGATTGCATCACTGTACTCCAGCGTGGGCAACAGAAACTCCATCTCAAAAAAGA	20	PASS	ClusterIDs=HG3_PB_pbsv_17952:HG3_PB_SVrefine2Falcon1Dovetail_11329:HG3_PB_SVrefine2PBcRDovetail_8940:HG3_Ill_SVrefine2DISCOVARDovetail_12901:HG2_10X_SVrefine210Xhap12_12730:HG2_PB_assemblyticsfalcon_12737:HG2_PB_SVrefine2Falcon1plusDovetail_5773:HG2_PB_SVrefine2Falcon2Bionano_8974:HG3_Ill_MetaSV_2510:HG2_PB_pbsv_18272;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12730:HG3_Ill_SVrefine2DISCOVARDovetail_12901;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0520325;ClusterMaxSizeDiff=0.0390244;ClusterMaxEditDist=0.196457;PBcalls=7;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=305;DistBack=-6;DistForward=-1;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=19:53391725-53391718;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.9934;PctRecOverlap=0.9774;SizeDiff=2;StartDistance=-3;EndDistance=2;GTMatch=0;TruScore=98;MatchId=2661.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:19:19:0|1:19:2:0:17:1|0:0:16:8:0:./.:14:1:0/1:5:31:.:.:.
chr19	53697541	HG3_Ill_SVrefine2DISCOVARDovetail_12905	C	CTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGTGCCTGCCACCACGCCCGGCCAATTTTTGTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTTCTGACCTCGTGATCTGCCCGTCTCGGCCTCCCAAAGTGCTGGGATCTCAGGCG	20	PASS	ClusterIDs=HG2_Ill_Spiral_1180:HG4_PB_pbsv_18202:HG4_PB_HySA_26450:HG3_PB_pbsv_17958:HG3_PB_SVrefine2Falcon1Dovetail_11334:HG3_Ill_manta_3964:HG3_Ill_SVrefine2DISCOVARDovetail_12905:HG2_Ill_SVrefine2DISCOVARplusDovetail_6191:HG2_Ill_MetaSV_2367:HG2_10X_SVrefine210Xhap12_12736:HG4_Ill_manta_4118:HG2_PB_pbsv_18281:HG4_Ill_Spiral_1402:HG3_Ill_Spiral_18463;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12736:HG2_Ill_MetaSV_2367:HG2_Ill_SVrefine2DISCOVARplusDovetail_6191:HG3_Ill_SVrefine2DISCOVARDovetail_12905:HG3_Ill_manta_3964:HG3_PB_SVrefine2Falcon1Dovetail_11334;NumExactMatchSVs=6;ClusterMaxShiftDist=0.101576;ClusterMaxSizeDiff=0.0875657;ClusterMaxEditDist=0.24228;PBcalls=5;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=203;DistBack=2;DistForward=10;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=19:53697542-53697553;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2662.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:./.:12:6:7:16:./.:14:0:1:8:0/1:13:3:./.:.:.:.:.:.
chr19	53814556	HG2_Ill_GATKHC_28691	T	TAAGAGCTCACTTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_33149:HG3_PB_HySA_27397:HG2_PB_pbsv_18282:HG3_PB_pbsv_17959:HG3_Ill_GATKHC_28594:HG2_Ill_GATKHC_28691:HG2_Ill_GATKHCSBGrefine_11930:HG3_PB_HySA_27396;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11930:HG2_Ill_GATKHC_28691:HG3_Ill_GATKHC_28594;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0558659;ClusterMaxSizeDiff=0.0558659;ClusterMaxEditDist=0.168539;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=86;DistBack=9403;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=19:53814557-53814570;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:0|1:32:1:0:22:0|1:16:0:0:8:0/1:23:14:./.:.:.:.:.:.
chr19	54297825	HG3_Ill_SVrefine2DISCOVARDovetail_12908	C	CGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCATAATTTTTTTTTTTTATATACTGAGTCTTGCTGTCACCCAGGCTGGAGTGGGGTAGTGTGATCTCGGCTCACTGCAACCTCCACGTCCCATGTCCTAGTGATCCTCCCACCTCAGCCTCCCTAGTAGCTGGGACTACAGAGTAGCTGGGACTATAGGTGCGTGCTACCATGCCCAGCTAATTTTTGTATTTTTAGCAGAGACAGGGATTCACCATGTTGGCCAGGCTGGTCTGGAACTCCTGACCTGAAGCAATCTGCTCATCTT	20	PASS	ClusterIDs=HG3_PB_HySA_27404:HG2_PB_assemblyticsPBcR_12349:HG2_PB_assemblyticsfalcon_12746:HG4_PB_assemblyticsfalcon_12566:HG2_PB_pbsv_18284:HG4_Ill_MetaSV_2448:HG3_PB_pbsv_17962:HG2_PB_SVrefine2PBcRplusDovetail_5323:HG2_PB_SVrefine2Falcon1plusDovetail_5779:HG2_PB_PB10Xdip_15999:HG4_PB_pbsv_18205:HG2_PB_HySA_33152:HG4_PB_SVrefine2PBcRDovetail_9168:HG4_Ill_manta_4120:HG4_Ill_SVrefine2DISCOVARDovetail_12700:HG3_Ill_SVrefine2DISCOVARDovetail_12908:HG2_Ill_SVrefine2DISCOVARplusDovetail_6197:HG4_PB_SVrefine2Falcon1Dovetail_11355:HG2_Ill_manta_4850:HG4_PB_HySA_26454:HG2_PB_SVrefine2PB10Xhap12_13341;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6197:HG3_Ill_SVrefine2DISCOVARDovetail_12908:HG4_Ill_SVrefine2DISCOVARDovetail_12700:HG4_Ill_manta_4120;NumExactMatchSVs=4;ClusterMaxShiftDist=0.138264;ClusterMaxSizeDiff=0.128617;ClusterMaxEditDist=0.235114;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=-1;DistForward=48;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=301;REFWIDENED=19:54297574-54297874;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2664.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:12:24:0|1:11:0:1:23:1|0:0:5:19:0:0/1:15:11:0/1:6:32:.:.:.
chr19	54907186	HG3_Ill_GATKHCSBGrefine_11804	G	GCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCTGGTGGATCACCAGGTCAGGAGATCAAGACCATCCTGACTAACATGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGAGGAGCTTGCAGTGAGCCGAGATGGCACCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAATAAATAAATAAATAAATTTGCTTTCTTTGCTACCATTTTTCGGCCTGGGATAAGTTGTTTCAAATCCAGTTGTACTCCCATCACTCAGTTAAAACTTACCCTCTGGCTGGGTGCGGTGGCTCACA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11369:HG3_PB_pbsv_17983:HG3_Ill_MetaSV_2516:HG4_PB_pbsv_18220:HG3_Ill_GATKHCSBGrefine_11804:HG2_PB_pbsv_18303:HG2_Ill_GATKHCSBGrefine_11937:HG4_Ill_GATKHCSBGrefine_12331:HG2_PB_SVrefine2PBcRplusDovetail_5334:HG4_Ill_MetaSV_2452:HG3_Ill_SVrefine2DISCOVARDovetail_12914:HG2_PB_SVrefine2Falcon2Bionano_8989:HG2_10X_SVrefine210Xhap12_12756;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11937:HG3_Ill_GATKHCSBGrefine_11804:HG3_Ill_MetaSV_2516;NumExactMatchSVs=3;ClusterMaxShiftDist=0.127341;ClusterMaxSizeDiff=0.127341;ClusterMaxEditDist=0.246851;PBcalls=6;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=393;DistBack=-261;DistForward=39;DistMin=-261;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=283;REFWIDENED=19:54907165-54907447;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2666.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:23:34:0|1:23:4:0:28:0|1:29:0:1:19:0/1:23:3:./.:5:38:.:.:.
chr19	54925251	HG2_PB_pbsv_18304	G	GGGTCTTTCACCACCATCATTCCATCAAATCACTATCATCATCATCATATCCTCATCTTCACATCACCATCACACCACCACACCATCACAACCACCACCACCATCACCACGTCACCACCATCACCATCACCAACATCATCACCACCATCACCACCATCACCAGCATTCATCACCACCATCACACCATCACCCACCAACCACCATCCACCACATCACCATCACCACCATCACCACCACCATCACCAACATCATCACCACCATTCACACCACATCACCAATATGCATCACCACCATCACCACCATCACCAACATTCTCACCACCATCACCACCTATCACCATCACCAACATCATCACCACCATCACCAGCATCATCAGCCACCATCACCACCATCACCATCACCAACATCATCACCCACCATCACCACCACCCACCATCCACCAACTCATCCACCACCATCACCAACATTCACCACCACCATCACCACCCACCACCATAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_18304:HG4_PB_pbsv_18222:HG3_PB_pbsv_17984:HG2_PB_SVrefine2PBcRplusDovetail_5335:HG4_PB_SVrefine2Falcon1Dovetail_11371:HG4_Ill_SVrefine2DISCOVARDovetail_12707:HG2_PB_SVrefine2Falcon1plusDovetail_5791:HG4_Ill_MetaSV_2453;NumClusterSVs=8;ExactMatchIDs=HG2_PB_pbsv_18304;NumExactMatchSVs=1;ClusterMaxShiftDist=0.179266;ClusterMaxSizeDiff=0.177106;ClusterMaxEditDist=0.239741;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=499;DistBack=4904;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=19:54925252-54925251;PctSeqSimilarity=0.9589;PctSizeSimilarity=0.9739;PctRecOverlap=0.976;SizeDiff=13;StartDistance=-5;EndDistance=-5;GTMatch=1;TruScore=96;MatchId=2667.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:41:./.:0:0:0:0:./.:0:0:27:29:./.:1:12:1/1:2:60:.:4698:.
chr19	55510394	HG3_Ill_Krunchall_23830	C	CACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCA	20	PASS	ClusterIDs=HG4_PB_pbsv_18230:HG4_Ill_manta_4124:HG2_Ill_manta_4855:HG2_PB_PB10Xdip_16025:HG4_PB_assemblyticsfalcon_12602:HG4_Ill_Krunchall_24601:HG4_Ill_FB_15221:HG4_Ill_250bpfermikitraw_23557:HG4_Ill_150bpfermikitraw_22669:HG3_Ill_Krunchall_23830:HG3_Ill_250bpfermikitraw_23252:HG3_Ill_150bpfermikitraw_22569:HG2_Ill_Krunchall_24267:HG2_Ill_250bpfermikitraw_23926:HG2_Ill_150bpfermikitraw_22549:HG2_PB_pbsv_18310:HG4_PB_SVrefine2PBcRDovetail_9180:HG2_PB_SVrefine2PBcRplusDovetail_5338:HG2_PB_SVrefine2PB10Xhap12_13354:HG2_PB_SVrefine2Falcon2Bionano_8993:HG2_PB_SVrefine2Falcon1plusDovetail_5794;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22549:HG2_Ill_250bpfermikitraw_23926:HG2_Ill_Krunchall_24267:HG3_Ill_150bpfermikitraw_22569:HG3_Ill_250bpfermikitraw_23252:HG3_Ill_Krunchall_23830:HG4_Ill_150bpfermikitraw_22669:HG4_Ill_250bpfermikitraw_23557:HG4_Ill_FB_15221:HG4_Ill_Krunchall_24601;NumExactMatchSVs=10;ClusterMaxShiftDist=0.137255;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.211538;PBcalls=9;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=-27;DistForward=14;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=19:55510378-55500602;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2668.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:37:1/1:3:16:1:19:./.:2:9:1:6:1/1:1:40:./.:.:.:.:.:.
chr19	55576210	HG4_Ill_MetaSV_2457	A	ACCTCAGGTGATCTACCTGCCTCACCCTCCCAAAATGCTGGGATTACAGACGTGAGCCACCGTGCCACACCAGAAGCCGTTGTTGTTGTTGTTTTTGAGACGCAGTCTTACTCTGTCGCCCAGGCTGGAGCGCAGTGGCGTGATCTTGGCTCACCGCAACCTCTGCCTCCCGAATTCAAGCCTTTCTCCTGCCTCAGCCTCCCGAGTTGCTGGGATTACAGGTGCCCGCCACCAAGCCCAGGTAATGTTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTGGCCAGGCTGGTCTGGAGCTCCTGT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11351:HG2_PB_SVrefine2Falcon1plusDovetail_5796:HG4_PB_pbsv_18233:HG2_PB_pbsv_18313:HG4_Ill_manta_4125:HG4_Ill_MetaSV_2457:HG4_Ill_GATKHCSBGrefine_12338:HG2_Ill_GATKHCSBGrefine_11942:HG4_Ill_Spiral_1405:HG2_Ill_Spiral_1184:HG2_PB_SVrefine2Falcon2Bionano_8995:HG4_Ill_SVrefine2DISCOVARDovetail_12716:HG2_10X_SVrefine210Xhap12_12766:HG4_PB_SVrefine2PBcRDovetail_9182:HG4_PB_SVrefine2Falcon1Dovetail_11378;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11942:HG4_Ill_GATKHCSBGrefine_12338:HG4_Ill_MetaSV_2457:HG4_Ill_manta_4125;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0481541;ClusterMaxSizeDiff=0.0417335;ClusterMaxEditDist=0.224719;PBcalls=7;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=307;DistBack=41;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=19:55585852-55576271;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:14:./.:10:10:20:1:0|1:22:0:0:9:0/1:32:18:0/1:5:32:.:1099:.
chr19	55580305	HG4_PB_SVrefine2PBcRDovetail_9183	A	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAAGGGAAGGGAAGGAAAGGAAGGAAGGAAGGAGAAGGGAAGGGAGGGAAGGGAGGGGAGGGGGAAGGGGAGGGGGAGGTGAGGGGAGGGGAGGGGAGGGCAGGGGGACGGGAGGGGAGGGCAGGGGGAGGGAGGGGAGG	10	PASS	ClusterIDs=HG4_PB_pbsv_18234:HG3_PB_SVrefine2Falcon1Dovetail_11353:HG2_PB_SVrefine2PB10Xhap12_13358:HG2_PB_SVrefine2PBcRplusDovetail_5341:HG4_PB_SVrefine2PBcRDovetail_9183:HG2_PB_SVrefine2Falcon1plusDovetail_5797:HG4_PB_SVrefine2Falcon1Dovetail_11379:HG3_PB_SVrefine2PBcRDovetail_8955:HG3_PB_pbsv_17993:HG2_PB_SVrefine2Falcon2Bionano_8996:HG4_PB_SVrefine2Falcon1Dovetail_11380:HG3_PB_SVrefine2Falcon1Dovetail_11352;NumClusterSVs=12;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_9183;NumExactMatchSVs=1;ClusterMaxShiftDist=0.293948;ClusterMaxSizeDiff=0.293948;ClusterMaxEditDist=0.327778;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=166;DistBack=-43;DistForward=-1;DistMin=-43;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=48;REFWIDENED=19:55580306-55580353;PctSeqSimilarity=0.9467;PctSizeSimilarity=0.9398;PctRecOverlap=0.9281;SizeDiff=10;StartDistance=-7;EndDistance=-7;GTMatch=1;TruScore=93;MatchId=2670.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:7:32:1/1:4:13:1:16:./.:1:2:2:7:./.:0:0:./.:.:.:.:1099:.
chr19	55646063	HG2_PB_SVrefine2PB10Xhap12_13363	G	GAGGGGAGGGGAGAGGAGAAGAGGGGAGGGGAGAGGAGAAGAGGGGAGGGGAGAGGAGAAGAGGGGAGGGGAGAGGAGAAGAGGGGAGGGGAGAGGAGGGAAGAAGAAGGGAGGGGAGGGGAGGGGAGAAGAGGGGAGGAGAGCGGAGAAGAGGGGAGGAGAGGGGAGGGCAGAAGACGGGAGGGGAGAAGAGGGGAGGAGAGGGGATGGGAAAATAGGGGAGGGGAGGGGAGGAGAGGGGAGGAGAGGGGAGGAGAGAAGAGGGGAGGGGAGGGGAGGAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11383:HG3_PB_SVrefine2PBcRDovetail_8957:HG2_PB_SVrefine2PBcRplusDovetail_5345:HG2_PB_PB10Xdip_16033:HG2_PB_SVrefine2PB10Xhap12_13363:HG2_PB_pbsv_18319:HG2_PB_SVrefine2Falcon1plusDovetail_5802:HG3_PB_SVrefine2Falcon1Dovetail_11356:HG3_PB_pbsv_18000:HG2_PB_SVrefine2Falcon2Bionano_8999:HG4_PB_SVrefine2PBcRDovetail_9186;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13363:HG2_PB_SVrefine2PBcRplusDovetail_5345;NumExactMatchSVs=2;ClusterMaxShiftDist=0.13945;ClusterMaxSizeDiff=0.13578;ClusterMaxEditDist=0.249527;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=280;DistBack=-116;DistForward=-1;DistMin=-116;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=167;REFWIDENED=19:55646064-55646230;PctSeqSimilarity=0.953;PctSizeSimilarity=0.9492;PctRecOverlap=0.7288;SizeDiff=-15;StartDistance=-73;EndDistance=-73;GTMatch=1;TruScore=87;MatchId=2671.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:1:28:2:9:./.:0:2:0:2:./.:0:0:./.:.:.:.:.:.
chr19	55665075	HG2_10X_SVrefine210Xhap12_12772	G	GCCTGGGCAGCAGAGACTCCATCGCAAAAAAAAAAAAAAAAGGAAATTAAAAAAAAATTTTTTTTAAACCTCAAAGATTACAGGCATAAGCAACTGCA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12772:HG4_PB_pbsv_18241:HG2_PB_PB10Xdip_16036:HG4_Ill_manta_4126:HG4_Ill_GATKHC_28728:HG4_Ill_GATKHCSBGrefine_12346:HG4_Ill_150bpfermikitraw_22674:HG2_PB_SVrefine2Falcon2Bionano_9000:HG2_PB_HySA_33183:HG3_Ill_GATKHC_28651:HG3_Ill_150bpfermikitraw_22570:HG2_Ill_GATKHC_28744:HG2_Ill_GATKHCSBGrefine_11946:HG3_PB_HySA_27415:HG3_PB_HySA_27414:HG3_PB_pbsv_18002:HG4_PB_HySA_26471:HG2_PB_pbsv_18321:HG4_PB_SVrefine2PBcRDovetail_9187:HG2_PB_SVrefine2PBcRplusDovetail_5347:HG2_PB_SVrefine2PB10Xhap12_13366:HG2_PB_SVrefine2Falcon1plusDovetail_5805:HG4_PB_SVrefine2Falcon1Dovetail_11386:HG3_PB_SVrefine2PBcRDovetail_8959:HG3_PB_SVrefine2Falcon1Dovetail_11357:HG2_Ill_SVrefine2DISCOVARplusDovetail_6213;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12772:HG4_PB_SVrefine2Falcon1Dovetail_11386:HG3_PB_SVrefine2PBcRDovetail_8959:HG3_PB_SVrefine2Falcon1Dovetail_11357:HG2_Ill_SVrefine2DISCOVARplusDovetail_6213;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0736842;ClusterMaxSizeDiff=0.0725389;ClusterMaxEditDist=0.27551;PBcalls=16;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=97;DistBack=-97;DistForward=44;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=19:55665076-55665177;PctSeqSimilarity=0.9793;PctSizeSimilarity=0.9794;PctRecOverlap=0.4948;SizeDiff=2;StartDistance=-48;EndDistance=-48;GTMatch=0;TruScore=81;MatchId=2672.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:2:28:1:23:./.:3:14:0:8:1/1:0:9:./.:.:.:.:.:.
chr19	55697945	HG3_PB_SVrefine2Falcon1Dovetail_11358	C	CCCAGAGAGGCACAGAGACAAGACCACAGGCAGAGAGACCCAGAGAGCACAGAGACAAGACCACAGGCAGAGAGACCAGAGAGGCACAGAGACAAGACCACAGGCAGAGAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5806:HG3_PB_assemblyticsfalcon_12814:HG4_PB_HySA_26474:HG2_PB_HySA_33186:HG2_PB_pbsv_18322:HG3_PB_SVrefine2Falcon1Dovetail_11358:HG2_Ill_250bpfermikitraw_23932:HG2_PB_SVrefine2PB10Xhap12_13367:HG2_PB_PB10Xdip_16037;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11358;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0969163;ClusterMaxSizeDiff=0.0792952;ClusterMaxEditDist=0.15859;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=111;DistBack=-63;DistForward=61;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=76;REFWIDENED=19:55697933-55698008;PctSeqSimilarity=0.9881;PctSizeSimilarity=0.9737;PctRecOverlap=0.8696;SizeDiff=-3;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=94;MatchId=2673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:26:0|1:23:2:2:23:./.:13:0:1:11:0/1:21:13:./.:.:.:.:.:.
chr19	55777714	HG4_PB_SVrefine2Falcon1Dovetail_11390	G	GCACCATCACCAACATCATCACAACCACCATCACCAACATCATCATCACCACCATCACCACTATCTTCACCAATCACAATCATCATCTCACCATTCTCATCCTCACCACCATCACCATCACCACCATCCTCACCACCACCACCCACCATCATCACCACCATCACCATCACCACCATCACAATCATCATCATCACCATCATCACCATCACCACCATCCTCACCACCATCATCACCATCACCACCATCCTCACCACCACCACCATCACCACCATCACCATCACCACCATCACCATTATCACCACCATCACCATCATCACCATCACCACCATCCTCACCACCACCACCATCACCACCATCACCATCACCATTATCACCATCACCATTATCACCATCACCATCACCATACCACCACCATCACTATCATCACCACCACCAACACCATCACCATCACCATACCACCACCATCACTATCATCACCACCACCACCACCAACACCATCACCATTATCACCACCATCACCATCACCACCACCATCACTATCATCACCACCACCATCACTATCATCACCACCATCACAACCACCATCATCACAACACCATCACCAACATCATCACAACCATATCATCACCACCATCACAACTCTTCACCACCATCACAATCATCATCCATCATCACCATTCTCACCATCACCACCAATCTCACCATCACCACCATCACCACCACCACCACCAACACCATCACCAACACCACCACCATCACCAACATCATCACCATCCTCACCACCATCACCATCACCATCACCACCATCCTCACCATCACCACCACCATACTACCACACCCACACACCACCACCACCATCATCATCATCATCACCACCACCACCATCACATCACCACCACCATCATCATCATCCACCATCATCACACCATCACCATCAACCACCACCATCACCATCACCACCACCACATCACACCATCACCACCACCACCACCATCACCACCACCATCACCATCACCATCACCACCACCACATCCACCAACCATCACCACCACCATCACCATCACAACCATCACCACCACCACACCACCACCATCACCACCACCATCACCACCACCACCACCATCATCACCATCACCACCACCATCACTATCATCACCATCACCATCACCACCACCATCACCATCACCACTACCACCATCACTATCATCATCGCCATCCTCACCACCACCACCACCATCACTATCATCATCACCATCCTCACCACCATCACCACCATCACCATCACCACCACCACCATCACCACCACCATCATCATCACTATCATCACCACCACCACCATCACCACCACCACCATCACTACCACCATCATCACTATGACCATCACCAACATCACCATCATCACCACCATCACTATCACCATCACCACCACCACCATCACCACCACCATCACCACCACCACCACCATCTATCTCTACCACCATCACCACCATCACCATCACTATCACCACCACCATCACCACCACCATCATCACCATGACCATCACCAACATCACCATCATCAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11390:HG3_PB_pbsv_18008:HG4_PB_HySA_26475:HG4_PB_pbsv_18246:HG2_PB_HySA_33192:HG2_PB_PB10Xdip_16048:HG2_PB_PB10Xdip_16047:HG2_PB_pbsv_18326:HG3_PB_SVrefine2Falcon1Dovetail_11362:HG2_PB_SVrefine2PB10Xhap12_13370:HG2_PB_SVrefine2PBcRplusDovetail_5349:HG4_PB_SVrefine2PBcRDovetail_9190:HG2_PB_SVrefine2Falcon2Bionano_9003:HG2_PB_SVrefine2Falcon1plusDovetail_5809;NumClusterSVs=14;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_11390;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0549142;ClusterMaxSizeDiff=0.0542902;ClusterMaxEditDist=0.219027;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1561;DistBack=41043;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=145;REFWIDENED=19:55777715-55777859;PctSeqSimilarity=0.979;PctSizeSimilarity=0.9836;PctRecOverlap=0.9049;SizeDiff=-26;StartDistance=-138;EndDistance=-138;GTMatch=1;TruScore=95;MatchId=2674.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:1/1:1:21:2:23:./.:24:32:16:37:0/1:12:8:1/1:10:340:.:1084:.
chr19	55871708	HG4_Ill_GATKHC_28735	A	ACCCCCAGCCCCTCCTCCCTCAGACTGAGGAGTCCAGGCCCCAGTCTCTCCTCCCTCAGACTGAGGAGTCCAGGCCCCAGCTCCTCCTCCCTCAGACTCAGGAGTCCAGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9191:HG4_PB_SVrefine2Falcon1Dovetail_11391:HG4_PB_pbsv_18247:HG4_Ill_GATKHC_28735:HG3_PB_pbsv_18009:HG2_PB_pbsv_18327;NumClusterSVs=6;ExactMatchIDs=HG4_Ill_GATKHC_28735;NumExactMatchSVs=1;ClusterMaxShiftDist=0.136986;ClusterMaxSizeDiff=0.136986;ClusterMaxEditDist=0.347418;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=109;DistBack=-47;DistForward=0;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=624;REFWIDENED=19:55871399-55872022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2675.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:21:2:3:24:./.:1:0:2:1:./.:0:0:./.:.:.:.:.:.
chr19	55886709	HG3_Ill_GATKHCSBGrefine_11814	T	TAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCCCAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGGCTCC	20	PASS	ClusterIDs=HG2_PB_pbsv_18329:HG4_Ill_GATKHC_28736:HG3_PB_pbsv_18011:HG4_Ill_GATKHCSBGrefine_12347:HG3_Ill_GATKHC_28660:HG3_Ill_GATKHCSBGrefine_11814:HG2_Ill_GATKHC_28754:HG2_PB_PB10Xdip_16049;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_28754:HG3_Ill_GATKHCSBGrefine_11814:HG3_Ill_GATKHC_28660:HG4_Ill_GATKHCSBGrefine_12347:HG4_Ill_GATKHC_28736;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0680272;ClusterMaxSizeDiff=0.0136054;ClusterMaxEditDist=0.312925;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=-1;DistForward=21;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=536;REFWIDENED=19:55886262-55886797;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2676.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:1/1:1:13:2:21:./.:2:1:1:1:./.:2:2:./.:.:.:.:.:.
chr19	55983453	HG2_PB_SVrefine2PB10Xhap12_13375	G	GGAGGAAGGTTTTACCTGTACAGATGGAACCCTGTATATTGTTGCTTCCTCCAGGGAGTCTGCCCTGGTTTCCCCCAGGCTGCAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13375:HG3_PB_assemblyticsfalcon_12828:HG2_PB_HySA_33206:HG3_PB_HySA_27428:HG2_PB_SVrefine2PBcRplusDovetail_5353;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13375:HG2_PB_SVrefine2PBcRplusDovetail_5353;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0681818;ClusterMaxSizeDiff=0.0681818;ClusterMaxEditDist=0.125;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=84;DistBack=2059;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=425;REFWIDENED=19:55983454-55983878;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2677.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:9:19:0|1:5:0:2:17:./.:3:0:2:0:0/0:13:0:./.:.:.:.:.:.
chr19	56000239	HG3_PB_SVrefine2PBcRDovetail_8965	A	ATGTGGGAGCACCAAAGCCGTGGTCCCCAGCCCTGACTTCAGGGGCCAGACATCTGCAGCCCCACCCGCCTCAGAGACCTGCGTCTCAGCCAGCCCCTCTGTCCAGAGTCCTTCCTCCCAGCAGTGGGGGTTTCTGGTTCAGAGGTGTGAGGACCGTG	20	PASS	ClusterIDs=HG4_PB_pbsv_18254:HG3_PB_assemblyticsfalcon_12829:HG2_PB_pbsv_18337:HG3_PB_SVrefine2Falcon1Dovetail_11368:HG4_PB_SVrefine2Falcon1Dovetail_11396:HG4_Ill_GATKHCSBGrefine_12352:HG3_Ill_GATKHCSBGrefine_11815:HG2_PB_SVrefine2Falcon1plusDovetail_5811:HG2_Ill_SpiralSDKrefine_8049:HG2_10X_SVrefine210Xhap12_12780:HG4_PB_HySA_26479:HG3_PB_HySA_27429:HG2_PB_HySA_33207:HG4_Ill_SVrefine2DISCOVARDovetail_12725:HG4_Ill_MetaSV_2460:HG4_Ill_GATKHCSBGrefine_12351:HG3_PB_SVrefine2PBcRDovetail_8965:HG2_PB_SVrefine2Falcon2Bionano_9008:HG2_Ill_SVrefine2DISCOVARplusDovetail_6219:HG2_Ill_MetaSV_2377:HG2_10X_SVrefine210Xhap12_12779:HG4_PB_SVrefine2PBcRDovetail_9196:HG2_PB_SVrefine2PBcRplusDovetail_5354:HG2_PB_SVrefine2PB10Xhap12_13376:HG2_PB_PB10Xdip_16053;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12779:HG2_Ill_MetaSV_2377:HG2_Ill_SVrefine2DISCOVARplusDovetail_6219:HG2_PB_SVrefine2Falcon2Bionano_9008:HG3_PB_SVrefine2PBcRDovetail_8965:HG4_Ill_GATKHCSBGrefine_12351:HG4_Ill_MetaSV_2460:HG4_Ill_SVrefine2DISCOVARDovetail_12725;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0641026;ClusterMaxSizeDiff=0.0641026;ClusterMaxEditDist=0.215873;PBcalls=15;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=157;DistBack=10;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=19:56000241-56000243;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9873;PctRecOverlap=0.9873;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=2678.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:0:22:2:30:1/1:1:32:0:18:1/1:0:16:./.:.:.:.:.:.
chr19	56443084	HG2_Ill_GATKHCSBGrefine_11955	A	AGACAGAAAGAAAGAAAGAAAGACAGAAAGAAAGAAAGAAAGAAAGACAGAAAGAAAGACAGAAAGAAAGACAGAAAGAAAGACAGAAAGAAAGACAGAAAGAAAGACAGAAAGAAAGACAGAAAGAAAGACAG	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2526:HG3_PB_SVrefine2Falcon1Dovetail_11373:HG4_PB_assemblyticsfalcon_12640:HG2_PB_SVrefine2Falcon2Bionano_9011:HG4_PB_SVrefine2Falcon1Dovetail_11401:HG3_Ill_SVrefine2DISCOVARDovetail_12932:HG3_Ill_GATKHCSBGrefine_11819:HG2_Ill_GATKHCSBGrefine_11955:HG2_PB_HySA_33221:HG2_PB_HySA_33220:HG2_PB_SVrefine2PBcRplusDovetail_5359:HG3_Ill_Spiral_18508:HG2_PB_pbsv_18347:HG3_PB_pbsv_18030:HG4_Ill_MetaSV_2464:HG2_Ill_MetaSV_2380:HG4_PB_pbsv_18262;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11955:HG3_Ill_GATKHCSBGrefine_11819;NumExactMatchSVs=2;ClusterMaxShiftDist=0.329114;ClusterMaxSizeDiff=0.329114;ClusterMaxEditDist=0.356522;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=133;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=19:56443085-56443084;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=0.9925;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=2679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:21:0|1:16:1:1:18:./.:5:12:18:0:0/1:18:15:./.:.:.:.:.:.
chr19	56510074	HG3_Ill_manta_3969	G	GTATATATATATATGTGTGTATATATATATGTGTGTATATATATATGTGTATATATATATATGTGTATATATATATA	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22573:HG3_Ill_Spiral_18511:HG3_Ill_GATKHC_28688:HG3_Ill_manta_3969:HG3_Ill_150bpfermikitraw_22590:HG2_Ill_manta_4859:HG2_Ill_Krunchall_24286:HG2_Ill_250bpfermikitraw_23950;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22573:HG3_Ill_manta_3969:HG3_Ill_150bpfermikitraw_22590:HG2_Ill_manta_4859:HG2_Ill_Krunchall_24286:HG2_Ill_250bpfermikitraw_23950;NumExactMatchSVs=6;ClusterMaxShiftDist=0.169014;ClusterMaxSizeDiff=0.169014;ClusterMaxEditDist=0.183099;PBcalls=0;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=76;DistBack=-1;DistForward=7;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=19:56510073-56510076;PctSeqSimilarity=0.8902;PctSizeSimilarity=0.7917;PctRecOverlap=0.5258;SizeDiff=-20;StartDistance=36;EndDistance=36;GTMatch=0;TruScore=73;MatchId=2680.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:34:./.:33:11:3:22:./.:3:8:9:3:0/1:32:17:./.:.:.:.:.:.
chr19	56618129	HG4_Ill_250bpfermikitraw_23578	C	CGGGGTCTGCAGACCAGCACGTGGGAACGGCGGCATCCAGCACCTCATTCCAGGCT	20	PASS	ClusterIDs=HG3_PB_pbsv_18038:HG2_PB_assemblyticsfalcon_12825:HG3_PB_HySA_27449:HG4_Ill_scalpel_16591:HG4_Ill_manta_4128:HG4_Ill_GATKHC_28761:HG4_Ill_GATKHCSBGrefine_12363:HG4_Ill_250bpfermikitraw_23579:HG2_Ill_scalpel_16968:HG2_Ill_manta_4860:HG2_Ill_Krunchall_24293:HG2_Ill_GATKHC_28787:HG2_Ill_GATKHCSBGrefine_11961:HG2_Ill_250bpfermikitraw_23956:HG2_PB_PB10Xdip_16087:HG2_PB_HySA_33233:HG4_PB_assemblyticsfalcon_12646:HG4_PB_pbsv_18266:HG4_Ill_Krunchall_24620:HG4_Ill_GATKHC_28760:HG4_Ill_GATKHCSBGrefine_12362:HG4_Ill_250bpfermikitraw_23578:HG3_Ill_scalpel_17315:HG3_Ill_manta_3970:HG3_Ill_Krunchall_23855:HG3_Ill_GATKHC_28694:HG3_Ill_GATKHCSBGrefine_11824:HG3_Ill_250bpfermikitraw_23278:HG3_Ill_150bpfermikitraw_22594:HG2_Ill_Krunchall_24292:HG2_Ill_GATKHC_28786:HG2_Ill_GATKHCSBGrefine_11960:HG2_Ill_250bpfermikitraw_23955:HG4_PB_HySA_26506:HG3_PB_HySA_27448:HG4_Ill_SVrefine2DISCOVARDovetail_12736:HG3_PB_SVrefine2PBcRDovetail_8971:HG3_PB_SVrefine2Falcon1Dovetail_11376:HG3_Ill_SVrefine2DISCOVARDovetail_12935:HG2_PB_SVrefine2PBcRplusDovetail_5363:HG2_PB_SVrefine2PB10Xhap12_13387:HG2_PB_SVrefine2Falcon2Bionano_9015:HG2_Ill_SVrefine2DISCOVARplusDovetail_6229:HG2_10X_SVrefine210Xhap12_12791;NumClusterSVs=44;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23955:HG2_Ill_GATKHCSBGrefine_11960:HG2_Ill_GATKHC_28786:HG2_Ill_Krunchall_24292:HG3_Ill_150bpfermikitraw_22594:HG3_Ill_250bpfermikitraw_23278:HG3_Ill_GATKHCSBGrefine_11824:HG3_Ill_GATKHC_28694:HG3_Ill_Krunchall_23855:HG3_Ill_manta_3970:HG3_Ill_scalpel_17315:HG4_Ill_250bpfermikitraw_23578:HG4_Ill_GATKHCSBGrefine_12362:HG4_Ill_GATKHC_28760:HG4_Ill_Krunchall_24620:HG4_PB_assemblyticsfalcon_12646;NumExactMatchSVs=16;ClusterMaxShiftDist=0.122807;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.305085;PBcalls=14;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=55;DistBack=8;DistForward=1506;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=101;REFWIDENED=19:56618104-56618204;PctSeqSimilarity=0.994;PctSizeSimilarity=1;PctRecOverlap=0.4909;SizeDiff=0;StartDistance=-28;EndDistance=-28;GTMatch=0;TruScore=82;MatchId=2681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:35:1/1:0:8:2:14:./.:1:3:2:4:1/1:1:35:./.:.:.:.:.:.
chr19	56966044	HG3_Ill_MetaSV_2531	T	TAAAAATGGATTAAAGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5822:HG3_PB_pbsv_18050:HG4_PB_HySA_26522:HG4_PB_pbsv_18273:HG4_Ill_MetaSV_2468:HG2_PB_pbsv_18364:HG4_Ill_GATKHCSBGrefine_12365:HG3_Ill_MetaSV_2531:HG2_Ill_MetaSV_2384:HG2_Ill_GATKHCSBGrefine_11963:HG3_PB_HySA_27457:HG2_Ill_breakscan11_4868:HG4_PB_HySA_26521:HG2_PB_PB10Xdip_16096:HG4_PB_HySA_26520:HG3_PB_SVrefine2PBcRDovetail_8976:HG3_PB_SVrefine2Falcon1Dovetail_11382:HG4_PB_assemblyticsfalcon_12654:HG4_PB_SVrefine2PBcRDovetail_9206:HG2_PB_SVrefine2PB10Xhap12_13395:HG2_PB_SVrefine2Falcon2Bionano_9023:HG2_10X_SVrefine210Xhap12_12803:HG4_PB_SVrefine2Falcon1Dovetail_11408:HG2_PB_SVrefine2PBcRplusDovetail_5371;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11963:HG2_Ill_MetaSV_2384:HG3_Ill_MetaSV_2531:HG4_Ill_GATKHCSBGrefine_12365:HG4_Ill_MetaSV_2468;NumExactMatchSVs=5;ClusterMaxShiftDist=0.24077;ClusterMaxSizeDiff=0.24077;ClusterMaxEditDist=0.368078;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=315;DistBack=10;DistForward=54946;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=19:56966041-56966061;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2682.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:./.:1:1:0:8:1/1:0:10:0:8:1/1:0:30:1/1:1:49:.:.:.
chr19	57083740	HG3_PB_assemblyticsfalcon_12863	A	AATATATATATACACATGTATATATGTATATACACATATATATATACACATATATATATATACATATATATATATATGTAAT	20	PASS	ClusterIDs=HG2_PB_pbsv_18365:HG4_PB_HySA_26526:HG2_10X_SVrefine210Xhap12_12804:HG2_PB_SVrefine2Falcon2Bionano_9024:HG4_Ill_GATKHC_28771:HG3_PB_assemblyticsfalcon_12863:HG3_PB_HySA_27459:HG2_PB_HySA_33244:HG4_PB_pbsv_18275;NumClusterSVs=9;ExactMatchIDs=HG3_PB_assemblyticsfalcon_12863;NumExactMatchSVs=1;ClusterMaxShiftDist=0.183908;ClusterMaxSizeDiff=0.183908;ClusterMaxEditDist=0.287356;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=81;DistBack=0;DistForward=9;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=19:57083741-57083751;PctSeqSimilarity=0.9647;PctSizeSimilarity=0.931;PctRecOverlap=0.931;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=2683.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:23:0|1:29:6:4:17:0|1:6:1:0:12:0/1:3:5:./.:.:.:.:.:.
chr19	57838730	HG2_10X_SVrefine210Xhap12_12818	C	CGAGATGGAGCCTCCCACTGTTGCCCTGGCAGGAGTGCGATGGTGCAGTCTTGGCTCACTACAACCTCCGTCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATACGCCACCACACCTGGCTAATTTTGTGTTTTTGGTAGAGACGGGGTTTCTCCATTTTGGTCAGGCTGGTCTCAAACTCCTGACCTTAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGTCATGAGCCACCGTGCCCAGCATAATTTTCTCTTTCAAGATCTACTCTAGGCTGGGCATGGTGACTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGGTACTATTTCATCTTCTTGTTCTCACTGAAATGCTGATCTTGTTTCTTCTTCTTCTTTTTTTCTTT	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_12957:HG4_PB_SVrefine2Falcon1Dovetail_11420:HG2_PB_pbsv_18381:HG4_Ill_manta_4133:HG4_PB_pbsv_18294:HG4_Ill_MetaSV_2473:HG3_Ill_GATKHCSBGrefine_11837:HG2_Ill_GATKHCSBGrefine_11976:HG2_Ill_MetaSV_2388:HG4_Ill_GATKHCSBGrefine_12379:HG4_PB_HySA_26545:HG2_PB_PB10Xdip_16124:HG3_Ill_Spiral_18524:HG2_Ill_Spiral_1186:HG3_Ill_MetaSV_2537:HG3_PB_pbsv_18070:HG2_PB_SVrefine2PB10Xhap12_13409:HG4_Ill_SVrefine2DISCOVARDovetail_12756:HG2_PB_SVrefine2PBcRplusDovetail_5380:HG2_PB_SVrefine2Falcon2Bionano_9030:HG2_Ill_SVrefine2DISCOVARplusDovetail_6242:HG2_10X_SVrefine210Xhap12_12818:HG4_PB_SVrefine2PBcRDovetail_9218:HG3_PB_SVrefine2PBcRDovetail_8986:HG3_PB_SVrefine2Falcon1Dovetail_11393:HG2_PB_SVrefine2Falcon1plusDovetail_5831;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12818:HG2_Ill_SVrefine2DISCOVARplusDovetail_6242:HG2_PB_SVrefine2Falcon2Bionano_9030:HG2_PB_SVrefine2PBcRplusDovetail_5380:HG4_Ill_SVrefine2DISCOVARDovetail_12756;NumExactMatchSVs=5;ClusterMaxShiftDist=0.213523;ClusterMaxSizeDiff=0.211151;ClusterMaxEditDist=0.274272;PBcalls=13;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=426;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=260;REFWIDENED=19:57838731-57838990;PctSeqSimilarity=0.9796;PctSizeSimilarity=1;PctRecOverlap=0.7354;SizeDiff=0;StartDistance=-113;EndDistance=-113;GTMatch=0;TruScore=90;MatchId=2684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:1/1:2:24:1:31:./.:0:4:0:3:1/1:0:22:1/1:3:67:.:.:.
chr19	58944373	HG2_Ill_Krunchall_24319	C	CAGTTCACTGCCTAACCCTCTCAGAGGCAATGGGAATTAAACCATTCCATTG	20	PASS	ClusterIDs=HG2_PB_HySA_33288:HG3_Ill_Cortex_1735:HG2_Ill_Cortex_4041:HG3_Ill_svaba_22709:HG3_Ill_manta_3976:HG3_Ill_Spiral_18531:HG3_Ill_Krunchall_23872:HG3_Ill_GATKHC_28732:HG3_Ill_GATKHCSBGrefine_11844:HG3_Ill_250bpfermikitraw_23305:HG3_Ill_150bpfermikitraw_22616:HG2_Ill_svaba_22490:HG2_Ill_manta_4869:HG2_Ill_SpiralSDKrefine_8074:HG2_Ill_Krunchall_24319:HG2_Ill_GATKHC_28816:HG2_Ill_GATKHCSBGrefine_11987:HG2_Ill_250bpfermikitraw_23986:HG2_Ill_150bpfermikitraw_22596:HG2_PB_pbsv_18391;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22596:HG2_Ill_250bpfermikitraw_23986:HG2_Ill_GATKHCSBGrefine_11987:HG2_Ill_GATKHC_28816:HG2_Ill_Krunchall_24319:HG2_Ill_SpiralSDKrefine_8074:HG2_Ill_manta_4869:HG2_Ill_svaba_22490:HG3_Ill_150bpfermikitraw_22616:HG3_Ill_250bpfermikitraw_23305:HG3_Ill_GATKHCSBGrefine_11844:HG3_Ill_GATKHC_28732:HG3_Ill_Krunchall_23872:HG3_Ill_Spiral_18531:HG3_Ill_manta_3976:HG3_Ill_svaba_22709;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0454545;PBcalls=2;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=5055;DistForward=189;DistMin=189;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1348;REFWIDENED=19:58944374-58934534;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:0|1:22:2:2:20:1|0:1:26:27:0:0/1:34:30:./.:.:.:.:.:.
chr19	59014019	HG2_PB_SVrefine2Falcon1plusDovetail_5839	A	AAGATGGATGGGTGAACAGTTAGAGTAGTGAGTGAGTAGATGGATGGGTGGACAGTTAGAGTAGTGAGTGAGTAGATGGATGGGTGGACAGTTAGAGTAGTGAGTGAGTAGATGGATGGGTGGACAGTTAGAGTGTGAGTGAGTAGATGGATGTGTGAACAGTTAGAGTAGTGAGTGAGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5839:HG3_PB_pbsv_18084:HG3_PB_SVrefine2PBcRDovetail_8992:HG2_PB_pbsv_18393:HG2_PB_assemblyticsfalcon_12866:HG2_PB_HySA_33291;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5839;NumExactMatchSVs=1;ClusterMaxShiftDist=0.127072;ClusterMaxSizeDiff=0.121547;ClusterMaxEditDist=0.1875;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=179;DistBack=47;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=786;REFWIDENED=19:59013469-59014254;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9944;PctRecOverlap=0.989;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2687.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:18:./.:10:8:15:3:./.:7:12:3:1:0/1:7:2:./.:.:.:.:.:.
chr20	286912	HG2_Ill_SVrefine2DISCOVARplusDovetail_7400	A	ACCAGGCTGGAGTGCAGTGGCTCACTGCGTGGCTCGCTACAGCCTACAACTCCTGGGCTCCAGCAATCCTGCTGCCCCAGCCTCCTGTGTAACTGAGACTACAGGCACGCACCACCACACCCAGCTAATTTTTTCTTTCTTTTTTTTTTTTTTGAGATGAACTCTCACTCTGTTGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8998:HG4_PB_pbsv_18309:HG2_PB_HySA_33302:HG2_PB_pbsv_18400:HG4_PB_HySA_26561:HG3_PB_pbsv_18090:HG4_PB_SVrefine2PBcRDovetail_9224:HG3_Ill_GATKHCSBGrefine_11849:HG2_PB_SVrefine2PBcRplusDovetail_6301:HG2_PB_SVrefine2PB10Xhap12_13426:HG2_PB_SVrefine2Falcon1plusDovetail_6795:HG2_Ill_SVrefine2DISCOVARplusDovetail_7400:HG2_Ill_GATKHCSBGrefine_11990:HG2_PB_assemblyticsfalcon_15148:HG2_PB_assemblyticsPBcR_14745:HG4_PB_SVrefine2Falcon1Dovetail_11430:HG4_Ill_GATKHCSBGrefine_12393:HG3_PB_SVrefine2Falcon1Dovetail_11402:HG3_PB_assemblyticsfalcon_15141:HG3_PB_HySA_27491:HG2_PB_PB10Xdip_18538:HG2_PB_PB10Xdip_18537:HG2_PB_SVrefine2Falcon2Bionano_9042:HG2_PB_SVrefine2PB10Xhap12_13425;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11990:HG2_Ill_SVrefine2DISCOVARplusDovetail_7400:HG2_PB_SVrefine2Falcon1plusDovetail_6795:HG2_PB_SVrefine2PB10Xhap12_13426:HG2_PB_SVrefine2PBcRplusDovetail_6301:HG3_Ill_GATKHCSBGrefine_11849:HG4_PB_SVrefine2PBcRDovetail_9224;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0578035;ClusterMaxSizeDiff=0.0561798;ClusterMaxEditDist=0.28169;PBcalls=20;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=175;DistBack=18116;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=244;REFWIDENED=20:286877-287120;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:1:22:0:18:./.:3:20:1:21:1/1:0:14:./.:.:.:.:.:.
chr20	401309	HG2_PB_PB10Xdip_18539	G	GCCACCCCATCCCCCGTCCCCATCCCCCATCCCCCGTCCCCCGTCCCCATCCCCCGTCCCCCATCTCCTGTCCCCCGTCCCCATCCCCCGTCCCCCGTCCCCCATCCCATCCCCCACCCCCATCCCCCGTCCCCCGTCCCCATCCCCCATCCCCCATCCCCATCCCCCGTCCGCCGTCCCCCATCTCCTGTCCCCCGTCCCCCATCCCCCGTC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_18539:HG4_PB_SVrefine2Falcon1Dovetail_11432:HG4_PB_pbsv_18311:HG3_PB_pbsv_18092:HG3_PB_HySA_27494:HG2_PB_SVrefine2Falcon1plusDovetail_6796:HG2_PB_pbsv_18402:HG2_PB_SVrefine2PBcRplusDovetail_6302:HG3_PB_SVrefine2PBcRDovetail_8999:HG4_PB_SVrefine2PBcRDovetail_9225:HG2_PB_SVrefine2PB10Xhap12_13427:HG2_PB_SVrefine2Falcon2Bionano_9043:HG3_PB_SVrefine2Falcon1Dovetail_11403:HG2_PB_PB10Xdip_18540;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_18539:HG2_PB_PB10Xdip_18540;NumExactMatchSVs=2;ClusterMaxShiftDist=0.103837;ClusterMaxSizeDiff=0.103837;ClusterMaxEditDist=0.248908;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=212;DistBack=12607;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=20:401310-401375;PctSeqSimilarity=0.966;PctSizeSimilarity=0.9339;PctRecOverlap=0.9383;SizeDiff=-15;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=3110.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:43:1/1:2:19:1:16:./.:2:9:0:12:./.:0:3:./.:.:.:.:.:.
chr20	745181	HG2_Ill_250bpfermikitraw_23996	A	AGGGGAGAATCCCCCACCTAAGGGGAGAGCCCCCACCTAAGGGGAGAATCCCCCACCTAAGGGGAGAGCCCCCACCTAAGGGGAGAATCCCCCACCTAAGGGGAGAGCCCCCACCTAT	20	PASS	ClusterIDs=HG4_PB_pbsv_18316:HG2_PB_PB10Xdip_18411:HG3_PB_assemblyticsfalcon_15147:HG2_PB_assemblyticsfalcon_15156:HG2_PB_assemblyticsPBcR_14752:HG4_PB_HySA_26566:HG4_PB_SVrefine2PBcRDovetail_9229:HG4_PB_SVrefine2Falcon1Dovetail_11436:HG3_PB_SVrefine2PBcRDovetail_9003:HG3_PB_SVrefine2Falcon1Dovetail_11406:HG3_Ill_250bpfermikitraw_23313:HG2_PB_SVrefine2PBcRplusDovetail_6306:HG2_PB_SVrefine2PB10Xhap12_13432:HG2_PB_SVrefine2Falcon2Bionano_9047:HG2_PB_SVrefine2Falcon1plusDovetail_6800:HG2_Ill_MetaSV_2821:HG2_Ill_250bpfermikitraw_23996:HG2_PB_PB10Xdip_18410:HG3_PB_HySA_27502:HG2_PB_pbsv_18407:HG2_PB_HySA_33316:HG3_PB_pbsv_18097;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23996:HG2_Ill_MetaSV_2821:HG2_PB_SVrefine2Falcon1plusDovetail_6800:HG2_PB_SVrefine2Falcon2Bionano_9047:HG2_PB_SVrefine2PB10Xhap12_13432:HG2_PB_SVrefine2PBcRplusDovetail_6306:HG3_Ill_250bpfermikitraw_23313:HG3_PB_SVrefine2Falcon1Dovetail_11406:HG3_PB_SVrefine2PBcRDovetail_9003:HG4_PB_SVrefine2Falcon1Dovetail_11436:HG4_PB_SVrefine2PBcRDovetail_9229;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0772532;ClusterMaxSizeDiff=0.0600858;ClusterMaxEditDist=0.347826;PBcalls=19;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=117;DistBack=55;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=108;REFWIDENED=20:745076-745183;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:45:1/1:2:10:2:12:./.:3:4:2:6:0/1:8:14:./.:.:.:.:.:.
chr20	1206541	HG2_PB_HySA_33322	C	CCCCCGCCCTCGCCCACTGCCCGCCCGTCCCTGCACGCCCCGCCCCTCGCCCACTGCTCCGCCCCGTCCCCTGCACG	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_15163:HG3_PB_pbsv_18100:HG4_PB_pbsv_18322:HG2_PB_HySA_33322:HG4_PB_HySA_26572:HG2_PB_pbsv_18412;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_33322;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0759494;ClusterMaxSizeDiff=0.0506329;ClusterMaxEditDist=0.236025;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=76;DistBack=20;DistForward=99;DistMin=20;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=147;REFWIDENED=20:1206497-1206643;PctSeqSimilarity=0.9648;PctSizeSimilarity=0.962;PctRecOverlap=0.7215;SizeDiff=-3;StartDistance=21;EndDistance=21;GTMatch=0;TruScore=88;MatchId=3112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:23:4:4:26:./.:3:2:1:0:./.:0:0:./.:.:.:.:.:.
chr20	1778684	HG2_Ill_250bpfermikitraw_24005	A	ATTGCCTAGGTGACAGAGTGAGGCTCCATCTTAAGAAAAAAAAAAGCCTGTTAAGAGGATGAAAAGAGCAGCCAGGCATTGACTGTGGTGCCTCACGCCTATAATCCCAGTGCTT	20	PASS	ClusterIDs=HG4_PB_pbsv_18328:HG3_PB_assemblyticsfalcon_15158:HG3_PB_pbsv_18105:HG2_PB_assemblyticsfalcon_15168:HG2_PB_assemblyticsPBcR_14763:HG4_Ill_MetaSV_2917:HG4_Ill_GATKHCSBGrefine_12396:HG3_PB_SVrefine2Falcon1Dovetail_11413:HG3_Ill_manta_3981:HG3_Ill_Spiral_18545:HG3_Ill_SVrefine2DISCOVARDovetail_12978:HG3_Ill_MetaSV_2971:HG3_Ill_GATKHCSBGrefine_11854:HG3_Ill_250bpfermikitraw_23326:HG3_Ill_150bpfermikitraw_22634:HG2_PB_SVrefine2PBcRplusDovetail_6314:HG2_PB_SVrefine2PB10Xhap12_13440:HG2_PB_SVrefine2Falcon2Bionano_9055:HG2_PB_SVrefine2Falcon1plusDovetail_6807:HG2_Ill_manta_4873:HG2_Ill_SpiralSDKrefine_9635:HG2_Ill_SVrefine2DISCOVARplusDovetail_7409:HG2_Ill_MetaSV_2824:HG2_Ill_GATKHCSBGrefine_11994:HG2_Ill_250bpfermikitraw_24005:HG2_Ill_150bpfermikitraw_22611:HG2_10X_SVrefine210Xhap12_12837:HG2_PB_pbsv_18418:HG2_PB_PB10Xdip_18061:HG2_PB_PB10Xdip_18060:HG4_PB_HySA_26579:HG2_PB_HySA_33327;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12837:HG2_Ill_150bpfermikitraw_22611:HG2_Ill_250bpfermikitraw_24005:HG2_Ill_GATKHCSBGrefine_11994:HG2_Ill_MetaSV_2824:HG2_Ill_SVrefine2DISCOVARplusDovetail_7409:HG2_Ill_SpiralSDKrefine_9635:HG2_Ill_manta_4873:HG2_PB_SVrefine2Falcon1plusDovetail_6807:HG2_PB_SVrefine2Falcon2Bionano_9055:HG2_PB_SVrefine2PB10Xhap12_13440:HG2_PB_SVrefine2PBcRplusDovetail_6314:HG3_Ill_150bpfermikitraw_22634:HG3_Ill_250bpfermikitraw_23326:HG3_Ill_GATKHCSBGrefine_11854:HG3_Ill_MetaSV_2971:HG3_Ill_SVrefine2DISCOVARDovetail_12978:HG3_Ill_Spiral_18545:HG3_Ill_manta_3981:HG3_PB_SVrefine2Falcon1Dovetail_11413:HG4_Ill_GATKHCSBGrefine_12396:HG4_Ill_MetaSV_2917;NumExactMatchSVs=22;ClusterMaxShiftDist=0.061674;ClusterMaxSizeDiff=0.0611354;ClusterMaxEditDist=0.205128;PBcalls=15;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=114;DistBack=13585;DistForward=6295;DistMin=6295;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=20:1778685-1778687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:71:1/1:1:13:0:12:1/1:0:25:0:25:1/1:0:25:./.:.:.:.:.:.
chr20	2639728	HG4_Ill_GATKHCSBGrefine_12401	C	CGCAGATCAGAGGCAGGATGTGGCTACCGAGCAGGCAAAGATGATGGGAAAT	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_12780:HG2_PB_pbsv_18424:HG3_PB_HySA_27528:HG3_PB_pbsv_18116:HG4_PB_HySA_26589:HG2_PB_HySA_33340:HG4_Ill_svaba_22477:HG4_Ill_Krunchall_24662:HG4_Ill_GATKHC_28831:HG4_Ill_GATKHCSBGrefine_12401:HG4_Ill_Cortex_2048:HG4_Ill_250bpfermikitraw_23620:HG3_Ill_svaba_22736:HG3_Ill_manta_3983:HG3_Ill_Spiral_18551:HG3_Ill_Krunchall_23901:HG3_Ill_GATKHC_28770:HG3_Ill_GATKHCSBGrefine_11862:HG3_Ill_Cortex_2085:HG3_Ill_250bpfermikitraw_23336:HG2_Ill_svaba_22515:HG2_Ill_manta_4876:HG2_Ill_SpiralSDKrefine_9642:HG2_Ill_Krunchall_24345:HG2_Ill_GATKHC_28847:HG2_Ill_GATKHCSBGrefine_12000:HG2_Ill_Cortex_4819:HG2_Ill_250bpfermikitraw_24012:HG2_Ill_150bpfermikitraw_22617;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22617:HG2_Ill_250bpfermikitraw_24012:HG2_Ill_Cortex_4819:HG2_Ill_GATKHCSBGrefine_12000:HG2_Ill_GATKHC_28847:HG2_Ill_Krunchall_24345:HG2_Ill_SpiralSDKrefine_9642:HG2_Ill_manta_4876:HG2_Ill_svaba_22515:HG3_Ill_250bpfermikitraw_23336:HG3_Ill_Cortex_2085:HG3_Ill_GATKHCSBGrefine_11862:HG3_Ill_GATKHC_28770:HG3_Ill_Krunchall_23901:HG3_Ill_Spiral_18551:HG3_Ill_manta_3983:HG3_Ill_svaba_22736:HG4_Ill_250bpfermikitraw_23620:HG4_Ill_Cortex_2048:HG4_Ill_GATKHCSBGrefine_12401:HG4_Ill_GATKHC_28831:HG4_Ill_Krunchall_24662:HG4_Ill_svaba_22477;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0754717;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.205607;PBcalls=5;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=6349;DistForward=21;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=20:2639705-2639755;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3114.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:21:0|1:26:5:3:14:./.:11:0:1:14:0/1:17:18:./.:.:.:.:.:.
chr20	2823419	HG2_PB_SVrefine2Falcon1plusDovetail_6812	T	TATAGATGTATCTATCTATCGATAGACATATAGATGTATCTATCTATCGATAGATACATCTATCTATCGATCGATAGATACATCTATCTATCGATCGATAGATACATCTATCTATCGATCGATAGATACATCTATCTATCGATCGATAGATACATCTATCTATCGATCGATAGATACATCTATCTATCGATCGATAGATACATCTATCTATCGATCGATAGATACATCTATCTATCGATCGATAGATACATCTATCTATCGATCGATAGATACATCTATCTATCGATCGATAGATACATGTATCTATCGATCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9060:HG2_PB_SVrefine2PB10Xhap12_13447:HG2_PB_SVrefine2Falcon1plusDovetail_6812:HG2_PB_HySA_33343:HG2_Ill_MetaSV_2827:HG2_PB_SVrefine2PBcRplusDovetail_6318:HG2_PB_SVrefine2PB10Xhap12_13448;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6812;NumExactMatchSVs=1;ClusterMaxShiftDist=0.253425;ClusterMaxSizeDiff=0.253425;ClusterMaxEditDist=0.366438;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=312;DistBack=-134;DistForward=-1;DistMin=-134;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=134;REFWIDENED=20:2823420-2823553;PctSeqSimilarity=0.9795;PctSizeSimilarity=0.9936;PctRecOverlap=0.8317;SizeDiff=-2;StartDistance=-52;EndDistance=-52;GTMatch=1;TruScore=93;MatchId=3115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:82:1/1:6:28:1:31:./.:0:4:7:5:0/1:5:11:0/1:10:12:.:.:.
chr20	3033833	HG2_PB_SVrefine2Falcon2Bionano_9066	C	CCCTTTTGTGGTTTATTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12852:HG4_PB_pbsv_18347:HG2_Ill_breakscan11_4870:HG4_Ill_manta_4142:HG2_Ill_manta_4878:HG4_Ill_GATKHCSBGrefine_12406:HG2_Ill_GATKHCSBGrefine_12004:HG2_PB_HySA_33350:HG2_PB_pbsv_18431:HG2_PB_SVrefine2Falcon1plusDovetail_6818:HG2_PB_SVrefine2Falcon2Bionano_9066:HG2_Ill_MetaSV_2830;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12852:HG2_PB_SVrefine2Falcon2Bionano_9066:HG2_Ill_MetaSV_2830;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0504732;ClusterMaxSizeDiff=0.0378549;ClusterMaxEditDist=0.179845;PBcalls=5;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=315;DistBack=1;DistForward=8;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=20:3033834-3033849;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:0|1:19:5:3:18:1|0:0:8:19:0:0/1:32:10:0/1:6:33:.:.:.
chr20	4082830	HG2_PB_HySA_33361	T	TCAAGAAAATACAAATCAGCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCCTCCCTCTCCTCTCCCCACGGTCTCCCTCTCCCTCTCTTTCCACGGTCTCTCTCTGATGCCGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGAGTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTATTTTTTTGGTGGGGTTTTGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGCTCAATGGTGTCCAGGCTGGAGTGCGGTGGCGTGATCTCGGCTCGCTACATCCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGGGAGTGCAGCCTCTGCCCGGCCACCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCACCCATCGTCTGGGACGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCCGGCCGCCATCCATCTAGGAAGTGAGGAGCGCCTCTTCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCCGTCTGGGATGTGAGGAGCGCCTCTGCCCAGCTGCGACCGACCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCGCCCCATCTGGGAAGTGAGGAGACCCTCCACCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCCCGCCAGGCCAGCTGCCCCGTCCGGGAGGGAGGTGGGGGGCCAGCCCCCCGCCCTGCCAGCCGCCTGTCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCACCCCGTCTGGGAGGTGAGGGGTGCCTCTGCCCGCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCCTCTGCCCGGACAGCCGCCCTGTCTGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGCCAGCCGCCCCGTCCGGGAGGTGAGGGTGCCTCTGGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGTCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGCAGCCCCCTCTCCGGCCAGCCACCCCGTCTGGGAGGTGAGGGGTGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGACAGCCGCCCTGTCTGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGTGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCTCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGTGCCTCTGCCCAAGCCGCCCCTACTGGGAAGTGAGGAGCCCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTCCCGGCCAGCCACCCCGTCTGGGAGGTGAGGGGTGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCCTCTGCCCGGACAGCCGCCCTGTCTGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCCAGCCGCCCCGTCCGGGAGGTGAGGGGTGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGCCAGCCTCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCTGGCCAGCCGCCCCGTCCGGCAGGTGAGGGGTGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGGTCCGGGAGGTGAGGGGTGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCAGCCCCGTCTGGGAGGTGAGGGGTGCCTCTGCCCGGCCACCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGACAGCCGCCTCTGTCCGGGAGGGAGGTGGGGGGGTCAGTCCCCCGCCCGGCCAGCCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCGGCCACCCCTACTGGGAGGTGAGGAGCCCCTCTGCCGGGCCCACCACCCGTCTGGGAGGTGTGCCAGCAGCTCATTGAGAACGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTCATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCCTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACATTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTGTGCGAGAAAACACCCAAGAATGATCAATAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6327:HG2_PB_pbsv_18436:HG2_PB_assemblyticsfalcon_15195:HG2_PB_HySA_33361:HG2_PB_SVrefine2Falcon1plusDovetail_6824;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_33361;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0433758;ClusterMaxSizeDiff=0.0433758;ClusterMaxEditDist=0.106868;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=3173;DistBack=12421;DistForward=5872;DistMin=5872;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=20:4082831-4082830;PctSeqSimilarity=0.9899;PctSizeSimilarity=0.9956;PctRecOverlap=0.9956;SizeDiff=14;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3117.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:40:./.:7:20:29:4:./.:1:3:40:0:0/1:39:8:0/1:108:163:.:3195:.
chr20	4427308	HG2_PB_PB10Xdip_18331	ATAGA	CTCCCTGCCCCAACATACTCACAGCCTCCTCCACTATCAAAGTCCCACACCAGAATGGTATACTTGTTACAACTGATGAACCTATATTGATATGTCACTATCACTCAGAGTTCTTAGTTTACATTAGGGTTCACTCTTGAGGTTGTACATTTTAATGGGTTTGGACAAATGTATAATGACATATATCCACCATGATAGTATCATACACAGTGGTTTTACTGCTACCCAAAAAACCTTTTGTATTTAACCTATTCATTCCTCCTCTCACCCCATGCCTGGAAGCCACTGATTCTTTTACTATCTCCACAGTTTTGCCTTTCCCAGACTGTTATATAGTTGTAGTCTTTTCAGTTTGGCCTTTTTCATTTAGTAATGTGTGTTTAAGGTTCCTGCATGTTGTTGTTGTTGGTTTTTTTTTTTTTTTTTTTTTGAGACAGGAGTCTTGCTCTGTCACCTGGCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCGCTGCAATCTCCGCCTCTCAGGTTCAAGCGATTCTCCTGCTTCAGCCTCCTGAGTAGCTAGGACTACAGGCGCGCACTACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGAGTTTCGCCATGTTGGCCTGGCTGGTCTCAAACTCCTGACCTCAGGTAATCCACCCGCCTCGGCCTCCCATAATGCTAGGATTGTAGGCATGAGCCACCATGCCTGGCCTCCTCCACGTCTTTTCATGGCTTGATAGCTCAATGCTTTTTAGCAAATGGTCTAAATATGCCAATTAAAAGAGATGGTCAAAGTGAATTAAAAAAAATACTCAACAATATGTTATATATAAAAACCCCACTTTAAGTATAAAGACTTATATAGGTTAACAGTAAAGGGTGGAGAAATATGTACCATGCTGACACTAACGAAAAGAAAGTAGGAGTAGCTATATTTATTTCAGACAGAGAAGACTTCAGAGCAAGGAAAGTTAAAAGGGAAAAGAGGGATATTACATAATGATAGTGGGGTCAGTTCTCTGAGAAGACATAATCCTCAATGTGTATGAGTCTAACAGCAGAGCACCAAGATGCTTGAGACGTTGGTGTTAAAGTGATTACTGATGTGATTGGATTAATATCTACTATATTTATTACTGTTTTCTGTTAATTGTTCTTGTTCTTTATTTTTATTTTTGTCTTCCTCTCTTTTTATTCCTTTTATGGTTCTAATTGAATATTTTACATTATTCAACTTTCTCTCCTTTCTTAGGATATCAGTTATACATTTATTTAAAGCTTTTTTAAGTGGTTGCCCTAGAGTTTCAATATACATTTACAACTAATCCAAGTTCACTTTCAAATAACACTATACCACTTCATGGATAGCGTAAGTACATTATAATAACAAAATAATGATATTTTCTTTGTCCCTTTTATCATTGCTGTCATCCCTTTCATTAATACATAAGCATACATATGTAAGCATACACAATTGAATACATTGTTGCTGTTATTTTGAACTGTTATCTGTTAGATCAATTAAGAAAAATAAAACTTTTTATTTCACATTTACCTATTCCTTCTCTGATGCTTTTCATTTCTTTATACAGATCCGTGTTTCTGAGCTATATCATTTTTCTCCTCTGTAAAGCACTTCTTTTAACATTTCCTATAAGGCAGCTGTTAATACTTATAGGAAATTCCTCAATTTTTGTTTGTCTGAGAAAATCTTTATGTCTCCACTTTTAAAGGGTAATTTTGCAGGGTACAAAATTCTAGGTTGATGGATTTTTTTTTTCTCTCTCAACACTTCAAATATTTCATTTACTCTCTTTTTTCCCTTGATGAAGAGAAGTCAGATGTAATTCACGGTTGATGAGAAGTCTGATGTAATTCTTATTTTTGCTCCTCTATAAGTCAGGCAGCTTTTTCCCTCTGGCTTTTTTCAAGATTTTTTCTTTGTCTTGGATTTTCTGCAGTCTGAATATGGCATATCTAGGTATAGTTTTGGGGGCATTTATCCTGCTTGGTGTCCTCTGCATTTCCTCGGTCTGCAGTTTGGTGACTGACCTTAATTTGGGGGCAATTCTCAGTAATTATTATTTCAAATATTTCTTCTGTTCCTTTCTCTCTTTCTGCTTCTTCTAATAATCCCATTACATGTATGTTACACCTTTTGTAGTTGTCTCAGTCCTCAGATATTTTATTGTTTTTTTTTCAGTCATTTCTTTCCACTTTTCTTTTTCCATTTTGGAATTTTCTATTGACATATCTTCCAACTCAGGTTTTCTTTCCTTAACTGTGTCCAGTCTAGTAAGTCCCATCAAAGGCGTTCTTCATTTCTGATACAGTGCTTTTGATCTCAAACATCTCTTTTTGATTCTTAGAATAATCATTTCTCTACTTACATTGCCCATATGTTCTTGCCTATTGTCTACTTTATCCATTAGAACCCTAAACATAGTAATCAAAATTGTTTTAAATTCCTAGTCTGATAATTCAAAAATCCCTGCCATATCCAAATCTGGTTCTGATGCTTGCTCTATGTCTTCAGACTGTGGTGGTTTTTTTTGGTTTTTTTTTTTTGTCCTTTTAGTATGCCTTGCACTTTTTTCTTGAAAGCTGGGAATGATGTATTGGGTAAAAGGAATTCTGATAAGTAGGCCTGTAGTAATGTGGTGGTAAGGGGTCAGGGAGGGGAACTGTTCTTTATCCTAGGATTAGGTCTCAGTCATTTAGTGAGCTTGTGCCCCTAGGTGCTTCTGAGTCCACCCCAACTCCACTGTTAGGTGGAACAAAATGACTAGAGTAGAATGGAGTTGGGTATGTCCCTTCCCCCACATGGAAGCCTACAGGATGCTGAATTGGGCATTTCCCTTCCCTCAGTTCAGTCAGGCGCTGAAAAAATCCCAGTACTTTAAGCTCTAATAAAACAGTTTCTTTTAAGGACAGGCCTTGTTAAGAAGAACAGAATGCACTGGCCATTCTGGACAAAAAGTGAGTGGTTACTTTTTGTCCCCTCTGGATTTTCTCTGATACTTACTTTGAAAACCTGGTAGAGCTCCTGGAGCCAAAGCTCACAGGGGCTCCCCTATGACTGGGTGCCCCCTGGAGTTTTTAGCTCTCAGACTTGTCCACAGTGAACCCCCAGCAATTCGTCAGCGACAGATTTTTCTATCCCAGGGCTGCTGTCTGCAGAAGTTTCTGGTCATGGGTTTTTGCTCTGGTAAGTTGTGATTCTGCGTATCCTCCTGTGTGTCTCCCCAAATTTGGGGCAGCAGTTTGCCCTGTGACCTCACTTATCTTGTAGATCTAAGAACAAACTGATCCTTCAGTTCGTTCAGCTTTTTACTTGTTGTTAGAATGGAGTGATGACTTCCAAACTCCTTATAATCCAGACTGCAAACCAGAAGTGCAGTGAATTTTTTATTTAGGGGAAGAGGAGAGAGCAGAAAGACCCCGAAAACTTGGCCATGCTGCCTTACAGAGAGATTGATCCCAGGGTTTTTTATTATAAAGCAATCATTTCTGAAAGGAAAAATTGGCAGCTTCATGGTGATTTGCTTCACAGCCCACCTGTGAACTTCTGCACGTTTGTGATACCAAATGTCCACTTTGGAACGGGTTGTCTGCGTCTTCCATTAATTCTGTAGAACAAAGGTTCTGATGGATGCTGTTGTGTGCAGGTATTTGGAAGATTTTCCAAGCAGTGTAGGAGTAGCAATTAAAAGAGTCTTGGCTTTGCAAGAAATCTCTTGTGGTTTTGCTTTAACTAGACAGGGGACTAGAGATGGTTCTTTCAACAGAAAGGTTTGAGCAATTAGGCCACTACCCAATCAGAGTGAAAATTTCCTGTGGGTCAAGAACCTCGATGCTGTACACGAACTTAGGGTATGGTGTGAGGTGGGAACACAGTCTGGTGTGTTCTCATACATGGAGACTGTTTAAAATAATAAATGGTACCCACAGGACCTGATTTAATTGCACCCTTTTAGCTTCATCCACAAATTGTAAGTGATTTTTTATTTGTTGCTATAGTTCAGTTTGTCTTCCAATTCCTATTACGATTTCTTCTTTGACATATGAATTATTTCAAAGCATACTTTCTAAAATATGCAAACATGAGAATCAAAAGAGGAGGCACACCCTAAATTCCCAGCTGTGAAGCCCAGTCCTTTGGTCAGACCAATCGGCACAGTGCATGATGCCCAATAAATGTTTACAGAATGAATACACTCATGAAAGGACGGCATAGCCCTCAGTGTGAAAATTATTAAGAGGATGGGAAATGGATATTTATCAAGAGCCTGATTAGTGTAAGCTCTGGACCGGGCATATAACACAGAGCTTTATTTAATACTTGCATTATCCCCATGAGATGAACATTAAAGCACAGTAGTTAACAGCATGTTCCTCAAAATCAGATGGAATTCGAATTTCACTGCTTTTAGCCCAGATCATTTGGAAAGTTATCCAACAATATGATCAGAGAGAACAGTCCACAAGCCCACCCTCACTTGTGATCCCAGCTGCAAGGTCAGGGTGTTACCAAGACAGCCCTCGGTTTCTATAATTTGTTAGAAGGACTCGCATAGCTCACTGAAACCTGTTATACTCACAGTCGCAGTTTGTCACAGCTAAAGGATTGAGATTAAAATCAGGCCAAAGAAAAAGAGCATAGGGCACACTCTGAGTAAGCTTCCACTGAAAGGACAACTTCCACTGTCCTCTCCCTACGGAGCCAGGAGCATTATTTTCTCAGCATCTATATGTGAAAATATGCACAGAGTATTGCCAACCAGGAAGCTCACCTGAGCTTCTAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6825:HG3_PB_pbsv_18130:HG2_PB_pbsv_18439:HG4_PB_pbsv_18356:HG4_PB_HySA_26599:HG4_PB_SVrefine2Falcon1Dovetail_11452:HG3_PB_SVrefine2Falcon1Dovetail_11427:HG4_Ill_SVrefine2DISCOVARDovetail_12798:HG3_Ill_SVrefine2DISCOVARDovetail_12993:HG2_PB_SVrefine2PBcRplusDovetail_6328:HG2_PB_SVrefine2PB10Xhap12_13459:HG2_PB_SVrefine2Falcon2Bionano_9069:HG2_PB_PB10Xdip_18331:HG2_PB_PB10Xdip_18330:HG2_Ill_SVrefine2DISCOVARplusDovetail_7424:HG2_10X_SVrefine210Xhap12_12861;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12861:HG2_Ill_SVrefine2DISCOVARplusDovetail_7424:HG2_PB_PB10Xdip_18330:HG2_PB_PB10Xdip_18331:HG2_PB_SVrefine2Falcon2Bionano_9069:HG2_PB_SVrefine2PB10Xhap12_13459:HG2_PB_SVrefine2PBcRplusDovetail_6328:HG3_Ill_SVrefine2DISCOVARDovetail_12993:HG4_Ill_SVrefine2DISCOVARDovetail_12798;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0390393;ClusterMaxSizeDiff=0.0386306;ClusterMaxEditDist=0.172972;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=4805;DistBack=5165;DistForward=34839;DistMin=5165;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=20:4427313-4427307;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=-3;StartDistance=1;EndDistance=5;GTMatch=0;TruScore=99;MatchId=3119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:111:./.:0:2:0:2:1/1:0:11:0:13:1/1:0:45:1/1:0:625:.:4725:.
chr20	4779411	HG2_Ill_MetaSV_2832	G	GCAGTGAGCTGAGATCATTCCACTGCACTCCAGCCTGGGTGACAGAGTGAAACTCTGTCTCAGAAAAAAAATAAAAGACTCGAAGCTTCCAGGCTGTTCAGAAGTGAAATGAGACAGGTTTGAGCCACACTAACTTATGCTTCATAGACATGACCTTATCATGTGTTTAAAAACTTGTGGCTGGGAGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGATGGGCAGATTGCCTGAAGTTAGGAATTTGAGACCAGTCTGACCAACATGGTGAAACCCATCTCTACTAAAAATACAAAAAAAAAATTTAGCCAGGCATGGTGGCGTGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTGGAGGTTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6826:HG3_PB_SVrefine2Falcon1Dovetail_11428:HG3_PB_assemblyticsfalcon_15193:HG2_PB_PB10Xdip_18334:HG4_Ill_Spiral_1408:HG4_PB_pbsv_18359:HG2_PB_pbsv_18441:HG2_Ill_Spiral_1189:HG4_PB_HySA_26604:HG4_Ill_MetaSV_2927:HG4_Ill_GATKHCSBGrefine_12409:HG2_Ill_MetaSV_2832:HG2_Ill_GATKHCSBGrefine_12009:HG2_PB_SVrefine2PB10Xhap12_13460:HG4_PB_SVrefine2PBcRDovetail_9249:HG4_Ill_SVrefine2DISCOVARDovetail_12801:HG2_Ill_SVrefine2DISCOVARplusDovetail_7425:HG2_10X_SVrefine210Xhap12_12862;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12009:HG2_Ill_MetaSV_2832:HG4_Ill_GATKHCSBGrefine_12409:HG4_Ill_MetaSV_2927;NumExactMatchSVs=4;ClusterMaxShiftDist=0.203608;ClusterMaxSizeDiff=0.203608;ClusterMaxEditDist=0.252874;PBcalls=9;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=404;DistBack=-75;DistForward=12;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=299;REFWIDENED=20:4779188-4779486;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:0|1:24:4:0:24:./.:1:8:9:0:0/1:24:22:0/1:6:26:.:.:.
chr20	4825471	HG4_PB_SVrefine2Falcon1Dovetail_11453	A	GAGGGGAGGGGAGGGGAGGGAGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGAGGGGAGGGGGGGGGAGGGGGGGGGGAGGGGGGAGGGGAAGAGGGAAGGGGAGGGGAGAGGGGAAGGGGAGGGGAGGGGAGGGGGAGGGGAGGGGGAGGGGAGGGGAGGGGAGGGAGGGGGGGAGAGGGAGGGGAGGGGAGGGAGGGGAGGGGAG	10	PASS	ClusterIDs=HG3_PB_pbsv_18133:HG2_PB_SVrefine2PBcRplusDovetail_6330:HG2_PB_PB10Xdip_18336:HG3_PB_HySA_27555:HG2_PB_PB10Xdip_18335:HG3_PB_SVrefine2Falcon1Dovetail_11429:HG4_PB_SVrefine2PBcRDovetail_9250:HG3_PB_SVrefine2PBcRDovetail_9004:HG2_PB_SVrefine2PB10Xhap12_13461:HG2_PB_SVrefine2Falcon2Bionano_9070:HG4_PB_SVrefine2Falcon1Dovetail_11453:HG2_PB_SVrefine2Falcon1plusDovetail_6827:HG4_PB_pbsv_18361;NumClusterSVs=13;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_11453;NumExactMatchSVs=1;ClusterMaxShiftDist=0.179104;ClusterMaxSizeDiff=0.179104;ClusterMaxEditDist=0.282974;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=207;DistBack=-55;DistForward=-1;DistMin=-55;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=58;REFWIDENED=20:4825469-4825526;PctSeqSimilarity=0.9539;PctSizeSimilarity=0.9628;PctRecOverlap=0.907;SizeDiff=-8;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=94;MatchId=3121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:29:1/1:1:17:0:7:./.:0:0:0:2:./.:0:5:./.:.:.:.:.:.
chr20	5021123	HG3_Ill_MetaSV_2981	T	TAAAAAAAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGAGAGACTCCGTCTCAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_18337:HG4_Ill_manta_4146:HG2_Ill_MetaSV_2833:HG2_PB_SVrefine2PBcRplusDovetail_6331:HG3_PB_SVrefine2Falcon1Dovetail_11431:HG2_PB_SVrefine2Falcon1plusDovetail_6828:HG4_Ill_MetaSV_2929:HG2_PB_HySA_33371:HG4_PB_SVrefine2Falcon1Dovetail_11455:HG2_PB_SVrefine2PB10Xhap12_13462:HG2_PB_SVrefine2Falcon2Bionano_9071:HG3_PB_SVrefine2PBcRDovetail_9005:HG4_PB_pbsv_18363:HG3_PB_HySA_27556:HG4_PB_SVrefine2PBcRDovetail_9252:HG4_Ill_SVrefine2DISCOVARDovetail_12802:HG4_Ill_GATKHCSBGrefine_12412:HG3_Ill_SVrefine2DISCOVARDovetail_12997:HG3_Ill_MetaSV_2981:HG3_Ill_GATKHCSBGrefine_11870:HG2_Ill_SVrefine2DISCOVARplusDovetail_7426:HG2_PB_pbsv_18444:HG4_PB_HySA_26606:HG3_PB_pbsv_18135:HG3_PB_assemblyticsfalcon_15197:HG2_PB_assemblyticsfalcon_15207:HG4_PB_assemblyticsfalcon_14958:HG2_PB_PB10Xdip_18338;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7426:HG3_Ill_GATKHCSBGrefine_11870:HG3_Ill_MetaSV_2981:HG3_Ill_SVrefine2DISCOVARDovetail_12997;NumExactMatchSVs=4;ClusterMaxShiftDist=0.123457;ClusterMaxSizeDiff=0.123457;ClusterMaxEditDist=0.22069;PBcalls=19;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=281;DistBack=2582;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=20:5021124-5021132;PctSeqSimilarity=0.9895;PctSizeSimilarity=0.9791;PctRecOverlap=0.9791;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:4:20:0:26:./.:0:6:1:4:1/1:0:12:./.:.:.:.:.:.
chr20	5023088	HG2_PB_SVrefine2Falcon1plusDovetail_6829	C	GAGAGTCTCACACTGTCGCCCAGGCTGGAGTGCAATGGCACTATCTTGACTCACTGCAACCTCCTCCTGTGTTCACGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACATGCCACCATGCCCGGCTAATTTTTCTTTTTTTT	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_12998:HG3_PB_SVrefine2PBcRDovetail_9006:HG2_PB_assemblyticsfalcon_15208:HG2_PB_SVrefine2Falcon1plusDovetail_6829:HG3_PB_HySA_27557:HG3_PB_pbsv_18136:HG2_Ill_MetaSV_2834:HG2_PB_pbsv_18445:HG2_Ill_GATKHCSBGrefine_12011:HG2_Ill_SVrefine2DISCOVARplusDovetail_7427;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6829:HG2_PB_assemblyticsfalcon_15208;NumExactMatchSVs=2;ClusterMaxShiftDist=0.107256;ClusterMaxSizeDiff=0.0694006;ClusterMaxEditDist=0.359621;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=155;DistBack=104;DistForward=24967;DistMin=104;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=143;REFWIDENED=20:5022945-5023087;PctSeqSimilarity=0.974;PctSizeSimilarity=0.9871;PctRecOverlap=0.5032;SizeDiff=2;StartDistance=76;EndDistance=76;GTMatch=0;TruScore=82;MatchId=3123.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:25:1:3:25:0|1:21:0:0:7:./.:12:1:./.:.:.:.:.:.
chr20	5725259	HG2_PB_PB10Xdip_18439	G	GGCATGGTGGTGGGAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGAGTGCGCCCCTGCACTCCAGCCTGGGTGACAAAGCAAGACTCCATCCCAAAAAAAAAAAAAAAAAAAAAAAAATTAGCCGGGCATGGTGGCGTATGCCTGTAATCCCAGCTGCTAGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAAAAGGTGGAGGTTGCGGTGAGCTGAGATTGTGCCATTGCACTCCAGGCTGGGCAACAAGAGCAAAATTTCGTCTTAAAAAAAAAAAAAAAGTCTTTATCACCATATTGTACATACTGATTTCTAAGCATTGCAGTGGTTCCCCTAAGATGAGATAGCACATTTCAATAAATACAAAAGAATCAAAAAGAATCAAATTATTCTTTTGTTTTGAGCAGAGTCTCGCTCTGTCACCCAGGCTGAAGTGCATTGGCGCTATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGCACATGCCATCAAGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGTTCTCGAACTCCTGACCTCATGATCCACCCGCCTTGGCCTCCAAAAGTGCTGGGATTACAGGCGTGAGACACCACGCCCAGCCCAAATTATTCTTTAGTATTCAGAAGCATCATCAGTTTCTTTGACAAAAAGTTATCCTCAAATTACATCTGTTTTTTGCTAACATACCATACTTTTCATTATTTCTAGCATGGTTGAAATAATTAATTTGGGAGCAAAATAAATTTAGAATTGCTGGCCAATAGTCTGTCACTTACTCCATTAAGCAATATTATTTTCATAGTCCTGAAAAGCATTTATTGCTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAGACGGAGTCTTGCCCTGTCACCCAGGCTGGAGTGCAGGAGCGCAATCTCGGCTCACTGCAAGCTCCACCTCCTGAGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCACACCCTGCTAATTTCTTTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCTGCTTCGGCCTCCCAAAGTACTGGGATTACAGGCGTGAGCCACCGCACCCAGCTTTATTGTTCCCTTTTTACAGATGAGAAAATTAAGGCTCAGAGAGGTTAAATGGCTACAGTCATACAATTGGTTAGTAAGAAAGCCAGGATTCAAGCTCGGCCTCCTAACTCCACATTCGGGGCATTTGCTGCTTCACTCTTGAATGTCCATAGTTGAGGGTGGCTCTGGGCCATGAGTCAGTCATGTCTGTCCCTAGCGTAATGAAATCTCATGCTTTCTATTAAGCCCTCACATACTTGAGGTGCCAAGAAATGGATTCTTTTTCCTAGCATCATGGAATATCCACCAAGTAGTGTTTATAAAGTCTTTACGACTTGCCTAGCATTGTGTTAATACTGATTTTAGTTCTTATGGTCCACACTTACATAGCTGCAATAGGTTCATTACCAGATGCACATGGCAAGTCAGTATACCAAGATGCCAGGTCGTAGCAGAGAAAAAAGTTTATAGGGTGCCGAATGAGGAGATGGAAGGGGAACTTCAACTCTGTCTCCCTGAGGAGTTTGGGGATAAGACTAATAAGGGTTTTGAAGTGGGCCAAAGTGTGGAAGTCATTGACTGGTGGAAAAGTGTAGGAAGAAGTCACAGACGGGGAGATAAAGAAACTGTATTCTCCGCCGGGCGTGATAGCTCATGCCTGTGATTTCAGCACTTTGGGAGGCCAAGGTGGGCAGATCACCTGAGGTCAGGAGCTCGAGACCAGCCTGGCCAACACAGTGAAACCCTGTCTCTACCAAAACTAGAAAAATTAGTGGGGTGTGGTAGTACCCACCTGTAATCCCAGCCACTCAGGAGACTGAGGCAGGAGAATCGCCTAAACCCAGGAGGTGGAGGTTGCAGTAAGCTGAGATCGTGCCACTGCACTCTAGCCTGGGCAACAGAGCAAGACACTGTCTCAAAAAAATAAAAGAAAAGAAAAAGTAAAAGAAACTGTATTCTCAGGCTTATTTGGTTCCTCTGTTGGGGGATCTTAAAATTGATAGGCATAAGTAGTTTCATTGGAATGTGGGATCTGAAAAACATCTTAAACAAAAGCCTTATGATTCTAATGTCAGAGATCCCATCCATCTTAAAGAAAAGTCTTATGCTTCTAACCTCAGAAATCCTATCCGTAGGAACAACGGGGGTTGCAAATGGTCAGTATCTAGTGATTAATGCATAATTATTGTAACTATATGTCTGCCCAGAATTTTTTTTTTGAGACAAGGTCTTGCTCTGTCATCCAGGCTGGATGCAGTGGTGTACTCATAGCTCACTGTAGCCTTGACTTCCTGGGCTCCAGTCATCCTCCTGCCTCAGCCTCCCAATTAGCTGGGACTACAGGCACAAATCACTGTGCCTGGCTAATTTTTTTCAGTTTTTGTAGAGCTGATGTCTCTACAAAAATGCCCAGGCTGGTCTTGAACTCCTGGCTTCACATACTTGGCCTCCCAAAGTGTTAGTGTTACAGGCATGAGCCACCAAGCCCAGCCCAGAATTCTTAACCTTGTGAGGATGGCTTCATTTATGTTCATTATAAATGTACAAGAAGTTACTGAGCGAGACACTCTGCGAGTGCTGGACAGGGCACGATGGCTCACGCCTGTAACCCCAGCACTTTGGAAGGCCAAGGCGGGCAAATCACTTGAAGTCAGGAGTTTGAGGCTAGCCTGGCCAACGTGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6335:HG4_PB_pbsv_18367:HG3_PB_pbsv_18140:HG2_PB_PB10Xdip_18439:HG3_PB_HySA_27564:HG4_PB_SVrefine2Falcon1Dovetail_11457:HG4_Ill_SVrefine2DISCOVARDovetail_12807:HG3_PB_SVrefine2PBcRDovetail_9009:HG4_PB_SVrefine2PBcRDovetail_9254:HG3_PB_SVrefine2Falcon1Dovetail_11433:HG2_PB_SVrefine2PB10Xhap12_13467;NumClusterSVs=11;ExactMatchIDs=HG2_PB_PB10Xdip_18439;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0436013;ClusterMaxSizeDiff=0.0436013;ClusterMaxEditDist=0.174072;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=2960;DistBack=-167;DistForward=12058;DistMin=-167;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=301;REFWIDENED=20:5725126-5725426;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9993;PctRecOverlap=0.9899;SizeDiff=-2;StartDistance=29;EndDistance=29;GTMatch=0;TruScore=99;MatchId=3124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:48:./.:20:7:0:26:./.:1:4:28:0:0/1:21:6:0/1:117:221:.:3047:.
chr20	6645839	HG2_Ill_Krunchall_24387	T	TTTTTACTTTTTTAATGTGGCTACTAGAAAACTTGAAATTCCGTATGTGGCTTGCATTGCATTTCTA	20	PASS	ClusterIDs=HG4_PB_pbsv_18373:HG2_PB_assemblyticsfalcon_15222:HG2_PB_pbsv_18453:HG3_PB_pbsv_18146:HG2_PB_SVrefine2Falcon1plusDovetail_6834:HG4_Ill_manta_4150:HG4_Ill_SVrefine2DISCOVARDovetail_12815:HG4_PB_assemblyticsfalcon_14972:HG4_Ill_GATKHC_28877:HG4_Ill_GATKHCSBGrefine_12418:HG3_PB_assemblyticsfalcon_15215:HG3_PB_SVrefine2PBcRDovetail_9013:HG3_Ill_manta_3989:HG3_Ill_Spiral_18588:HG3_Ill_SVrefine2DISCOVARDovetail_13011:HG3_Ill_GATKHC_28821:HG3_Ill_GATKHCSBGrefine_11877:HG2_PB_SVrefine2PBcRplusDovetail_6339:HG2_PB_SVrefine2PB10Xhap12_13472:HG2_PB_SVrefine2Falcon2Bionano_9076:HG2_Ill_scalpel_17040:HG2_Ill_manta_4883:HG2_Ill_SVrefine2DISCOVARplusDovetail_7437:HG2_Ill_Krunchall_24387:HG2_Ill_GATKHC_28893:HG2_Ill_GATKHCSBGrefine_12018:HG2_Ill_FB_15417:HG2_Ill_250bpfermikitraw_24050:HG2_Ill_150bpfermikitraw_22653:HG2_PB_PB10Xdip_18701:HG2_PB_PB10Xdip_18700:HG2_Ill_breakscan11_4871:HG3_PB_HySA_27573;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22653:HG2_Ill_250bpfermikitraw_24050:HG2_Ill_FB_15417:HG2_Ill_GATKHCSBGrefine_12018:HG2_Ill_GATKHC_28893:HG2_Ill_Krunchall_24387:HG2_Ill_SVrefine2DISCOVARplusDovetail_7437:HG2_Ill_manta_4883:HG2_Ill_scalpel_17040:HG2_PB_SVrefine2Falcon2Bionano_9076:HG2_PB_SVrefine2PB10Xhap12_13472:HG2_PB_SVrefine2PBcRplusDovetail_6339:HG3_Ill_GATKHCSBGrefine_11877:HG3_Ill_GATKHC_28821:HG3_Ill_SVrefine2DISCOVARDovetail_13011:HG3_Ill_Spiral_18588:HG3_Ill_manta_3989:HG3_PB_SVrefine2PBcRDovetail_9013:HG3_PB_assemblyticsfalcon_15215:HG4_Ill_GATKHCSBGrefine_12418:HG4_Ill_GATKHC_28877:HG4_PB_assemblyticsfalcon_14972;NumExactMatchSVs=22;ClusterMaxShiftDist=0.103704;ClusterMaxSizeDiff=0.0729927;ClusterMaxEditDist=0.235294;PBcalls=14;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=8836;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=20:6645840-6645841;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:1/1:1:31:1:25:1/1:1:28:0:16:1/1:0:48:./.:.:.:.:.:.
chr20	7415974	HG4_Ill_SVrefine2DISCOVARDovetail_12820	T	TTTATATATACGTATATTATATATGTATTATATTATATGTGTATTATATAACATGTGTATATAATATGTGTATTATATAATATATTATATAATACTAATATTATATAGAATATAATATATTATATAATATATAATTATATATAACATATAATATATATTCTATTCTATGTATATATAATATGTAATATATTATATAATATATGTATATGTAATATATAATATGTAATATATTATATATATGTATATGTAATATATAATATGTAATATA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11441:HG4_PB_SVrefine2PBcRDovetail_9260:HG3_PB_HySA_27579:HG2_PB_pbsv_18456:HG4_PB_pbsv_18376:HG2_PB_PB10Xdip_18704:HG2_PB_HySA_33392:HG2_Ill_MetaSV_2841:HG3_Ill_manta_3992:HG3_Ill_GATKHC_28828:HG3_Ill_GATKHCSBGrefine_11879:HG4_Ill_MetaSV_2936:HG2_Ill_GATKHC_28900:HG2_Ill_GATKHCSBGrefine_12020:HG4_PB_HySA_26629:HG3_PB_pbsv_18150:HG2_PB_SVrefine2PBcRplusDovetail_6342:HG2_PB_SVrefine2PB10Xhap12_13475:HG4_PB_SVrefine2Falcon1Dovetail_11465:HG4_Ill_SVrefine2DISCOVARDovetail_12820:HG3_PB_SVrefine2PBcRDovetail_9017:HG3_Ill_SVrefine2DISCOVARDovetail_13016:HG2_Ill_SVrefine2DISCOVARplusDovetail_7443:HG2_PB_SVrefine2Falcon2Bionano_9079:HG2_10X_SVrefine210Xhap12_12879:HG2_PB_SVrefine2Falcon1plusDovetail_6837;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7443:HG3_Ill_SVrefine2DISCOVARDovetail_13016:HG3_PB_SVrefine2PBcRDovetail_9017:HG4_Ill_SVrefine2DISCOVARDovetail_12820:HG4_PB_SVrefine2Falcon1Dovetail_11465;NumExactMatchSVs=5;ClusterMaxShiftDist=0.103512;ClusterMaxSizeDiff=0.0770642;ClusterMaxEditDist=0.281955;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=267;DistBack=21708;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=359;REFWIDENED=20:7415975-7416333;PctSeqSimilarity=0.9492;PctSizeSimilarity=0.9709;PctRecOverlap=0.2218;SizeDiff=-8;StartDistance=-210;EndDistance=-210;GTMatch=0;TruScore=71;MatchId=3127.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:68:1/1:4:19:5:22:./.:0:1:1:4:0/1:5:8:./.:.:.:.:.:.
chr20	8816491	HG2_Ill_MetaSV_2845	C	CAAAACTTAGTGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4872:HG2_PB_pbsv_18463:HG4_PB_assemblyticsfalcon_14994:HG4_PB_pbsv_18382:HG3_PB_assemblyticsfalcon_15231:HG2_PB_assemblyticsfalcon_15241:HG2_PB_SVrefine2Falcon1plusDovetail_6843:HG4_PB_SVrefine2Falcon1Dovetail_11474:HG2_PB_SVrefine2Falcon2Bionano_9083:HG4_Ill_MetaSV_2939:HG4_Ill_GATKHCSBGrefine_12426:HG2_Ill_MetaSV_2845:HG2_Ill_GATKHCSBGrefine_12025:HG2_10X_SVrefine210Xhap12_12886:HG3_PB_SVrefine2Falcon1Dovetail_11445:HG2_PB_HySA_33407;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12886:HG2_Ill_GATKHCSBGrefine_12025:HG2_Ill_MetaSV_2845:HG4_Ill_GATKHCSBGrefine_12426:HG4_Ill_MetaSV_2939;NumExactMatchSVs=5;ClusterMaxShiftDist=0.145937;ClusterMaxSizeDiff=0.145937;ClusterMaxEditDist=0.25539;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=301;DistBack=-1;DistForward=617;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=20:8816492-8816504;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:17:0|1:29:0:1:13:1|0:0:7:18:0:0/1:26:23:0/1:7:33:.:.:.
chr20	9605197	HG2_PB_SVrefine2Falcon1plusDovetail_6845	A	GAAATTAAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	20	PASS	ClusterIDs=HG4_PB_pbsv_18384:HG3_PB_assemblyticsfalcon_15237:HG4_PB_assemblyticsfalcon_15001:HG3_PB_pbsv_18160:HG2_PB_assemblyticsfalcon_15250:HG3_PB_SVrefine2Falcon1Dovetail_11447:HG4_PB_SVrefine2Falcon1Dovetail_11476:HG2_PB_SVrefine2Falcon2Bionano_9084:HG2_PB_SVrefine2Falcon1plusDovetail_6845:HG2_PB_pbsv_18465:HG4_Ill_GATKHCSBGrefine_12427:HG3_PB_HySA_27589:HG4_PB_HySA_26651;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6845;NumExactMatchSVs=1;ClusterMaxShiftDist=0.110599;ClusterMaxSizeDiff=0.110599;ClusterMaxEditDist=0.248132;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=320;DistBack=-11;DistForward=16604;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=20:9605198-9605206;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9969;PctRecOverlap=0.9969;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3129.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:28:./.:6:14:18:6:0|1:11:0:0:7:0/1:28:14:0/1:9:41:.:.:.
chr20	9640968	HG2_PB_assemblyticsfalcon_15252	AAGATTATTTTAATT	TGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCACCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_18467:HG4_PB_pbsv_18385:HG4_PB_assemblyticsfalcon_15003:HG3_PB_assemblyticsfalcon_15239:HG2_PB_assemblyticsfalcon_15252:HG2_PB_SVrefine2PBcRplusDovetail_6347:HG2_PB_HySA_33413:HG2_Ill_breakscan11_4873:HG4_PB_SVrefine2PBcRDovetail_9267:HG4_PB_SVrefine2Falcon1Dovetail_11478:HG3_PB_SVrefine2Falcon1Dovetail_11449:HG2_PB_SVrefine2Falcon1plusDovetail_6847:HG4_PB_HySA_26652;NumClusterSVs=13;ExactMatchIDs=HG2_PB_assemblyticsfalcon_15252;NumExactMatchSVs=1;ClusterMaxShiftDist=0.191489;ClusterMaxSizeDiff=0.184397;ClusterMaxEditDist=0.223404;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=261;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=20:9640983-9640967;PctSeqSimilarity=0.9486;PctSizeSimilarity=0.8969;PctRecOverlap=0.945;SizeDiff=-30;StartDistance=1;EndDistance=15;GTMatch=0;TruScore=93;MatchId=3130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:54:./.:29:11:5:25:./.:3:4:29:0:./.:32:2:./.:.:.:.:.:.
chr20	10304643	HG2_Ill_GATKHCSBGrefine_12028	A	AACTGGGACTTGTCTTTAGAAGACCACGAATAAAATACAGGTGTATGACCCTGGAGGGAGAGTGTCAAGGACCTGGCTGCAGTGTGGGGTAGGGCAGGAGAGGGCAAACCCTCCAGTGTGGAGAGGGCAGGACATTCGATCTTAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7456:HG4_PB_HySA_26653:HG3_PB_pbsv_18165:HG4_Ill_GATKHC_28908:HG4_Ill_GATKHCSBGrefine_12429:HG3_Ill_GATKHC_28854:HG3_Ill_GATKHCSBGrefine_11886:HG3_Ill_250bpfermikitraw_23404:HG3_Ill_150bpfermikitraw_22706:HG2_Ill_GATKHC_28931:HG2_Ill_GATKHCSBGrefine_12028:HG4_PB_pbsv_18388:HG2_PB_pbsv_18470:HG2_10X_SVrefine210Xhap12_12892:HG3_PB_SVrefine2PBcRDovetail_9026:HG4_PB_SVrefine2PBcRDovetail_9268:HG4_PB_SVrefine2Falcon1Dovetail_11479:HG3_PB_SVrefine2Falcon1Dovetail_11451:HG3_Ill_SVrefine2DISCOVARDovetail_13028;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12028:HG2_Ill_GATKHC_28931:HG3_Ill_150bpfermikitraw_22706:HG3_Ill_250bpfermikitraw_23404:HG3_Ill_GATKHCSBGrefine_11886:HG3_Ill_GATKHC_28854:HG4_Ill_GATKHCSBGrefine_12429:HG4_Ill_GATKHC_28908;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0738255;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.243421;PBcalls=8;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=144;DistBack=-70;DistForward=6344;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=147;REFWIDENED=20:10304570-10304716;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:19:./.:4:9:20:9:./.:6:0:3:14:0/1:21:14:./.:.:.:.:.:.
chr20	10990135	HG3_PB_SVrefine2PBcRDovetail_9027	G	GTTATTTCCCACCGAGGTGGTGAATGTCTTGACTGGCTGGATTTTCTGGCTAGATTTCTCCCTTCTCTGTGGATGGTCTCCTGCGCCCATATGCACTTTTGAGTTCCACTCAAGAGCCAGAACTAGTCTTGTTCTTGGGGGTTCAGGACCGTGGAAGAAGTAGTGCTAATGCAACCATATTGCTCATCTCTAGAAAGTGAGCTTCTCTATTGTTTTTGAGACCCAGACTAAATCTTTGTTCCATTTTCCATGGGTTTCTCTCTCAGACCCACTTATACTTGAGTCCTTGCCTTAAAAAATGCTTAGAACCAGTGTTTAGTATGCCTGGCTGCTATTCCAGAGCCACAATCAGGGCCTGATTCTGCACTCTTGGGCTTCACAATTGCCCGAGAGTGCAGCTATTATTA	20	PASS	ClusterIDs=HG3_PB_pbsv_18170:HG4_PB_HySA_26661:HG2_PB_pbsv_18473:HG4_Ill_Spiral_1413:HG3_Ill_Spiral_18615:HG4_PB_assemblyticsfalcon_15014:HG3_PB_assemblyticsfalcon_15251:HG2_PB_assemblyticsfalcon_15266:HG2_Ill_breakscan11_4874:HG2_PB_HySA_33427:HG4_Ill_GATKHCSBGrefine_12434:HG3_PB_SVrefine2PBcRDovetail_9027:HG3_PB_SVrefine2Falcon1Dovetail_11454:HG3_Ill_SVrefine2DISCOVARDovetail_13031:HG3_Ill_MetaSV_2993:HG3_Ill_GATKHCSBGrefine_11892:HG2_PB_SVrefine2PBcRplusDovetail_6352:HG2_PB_SVrefine2PB10Xhap12_13486:HG2_PB_SVrefine2Falcon2Bionano_9087:HG2_PB_SVrefine2Falcon1plusDovetail_6849:HG2_Ill_SVrefine2DISCOVARplusDovetail_7459:HG2_Ill_MetaSV_2847:HG2_Ill_GATKHCSBGrefine_12032:HG2_10X_SVrefine210Xhap12_12894:HG2_PB_PB10Xdip_18036;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12894:HG2_Ill_GATKHCSBGrefine_12032:HG2_Ill_MetaSV_2847:HG2_Ill_SVrefine2DISCOVARplusDovetail_7459:HG2_PB_SVrefine2Falcon1plusDovetail_6849:HG2_PB_SVrefine2Falcon2Bionano_9087:HG2_PB_SVrefine2PB10Xhap12_13486:HG2_PB_SVrefine2PBcRplusDovetail_6352:HG3_Ill_GATKHCSBGrefine_11892:HG3_Ill_MetaSV_2993:HG3_Ill_SVrefine2DISCOVARDovetail_13031:HG3_PB_SVrefine2Falcon1Dovetail_11454:HG3_PB_SVrefine2PBcRDovetail_9027:HG4_Ill_GATKHCSBGrefine_12434;NumExactMatchSVs=14;ClusterMaxShiftDist=0.097619;ClusterMaxSizeDiff=0.097619;ClusterMaxEditDist=0.21957;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=406;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=20:10990136-10990141;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:1/1:0:25:0:27:1/1:0:16:0:17:1/1:0:18:./.:4:48:.:.:.
chr20	11281573	HG2_PB_SVrefine2Falcon2Bionano_9088	AAAAAAA	TGGAATAAAAAGAAATGAGAACACTCATCCATAGCTAGTGAAATATAAAATGGTGCAGCCATTTCAGAAACTGTTTGCCAGCTCCTCAAAATGTTAATTCTAGAATTACTGTATGACCCAGTAATTCCTTTCTTAGTAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12895:HG4_PB_HySA_26663:HG2_PB_PB10Xdip_18037:HG4_PB_SVrefine2PBcRDovetail_9270:HG3_PB_SVrefine2PBcRDovetail_9028:HG2_PB_SVrefine2PB10Xhap12_13488:HG4_PB_pbsv_18392:HG3_PB_assemblyticsfalcon_15255:HG3_PB_SVrefine2Falcon1Dovetail_11455:HG4_PB_assemblyticsfalcon_15017:HG4_PB_SVrefine2Falcon1Dovetail_11482:HG4_Ill_SVrefine2DISCOVARDovetail_12834:HG3_Ill_SVrefine2DISCOVARDovetail_13032:HG2_PB_assemblyticsfalcon_15269:HG2_PB_SVrefine2PBcRplusDovetail_6353:HG2_PB_SVrefine2PB10Xhap12_13487:HG2_PB_SVrefine2Falcon2Bionano_9088:HG2_PB_SVrefine2Falcon1plusDovetail_6850:HG2_Ill_SVrefine2DISCOVARplusDovetail_7460:HG2_10X_SVrefine210Xhap12_12896:HG2_PB_pbsv_18474:HG4_Ill_MetaSV_2942:HG3_Ill_MetaSV_2994:HG3_PB_pbsv_18171;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12896:HG2_Ill_SVrefine2DISCOVARplusDovetail_7460:HG2_PB_SVrefine2Falcon1plusDovetail_6850:HG2_PB_SVrefine2Falcon2Bionano_9088:HG2_PB_SVrefine2PB10Xhap12_13487:HG2_PB_SVrefine2PBcRplusDovetail_6353:HG2_PB_assemblyticsfalcon_15269:HG3_Ill_SVrefine2DISCOVARDovetail_13032:HG4_Ill_SVrefine2DISCOVARDovetail_12834:HG4_PB_SVrefine2Falcon1Dovetail_11482:HG4_PB_assemblyticsfalcon_15017;NumExactMatchSVs=11;ClusterMaxShiftDist=0.162544;ClusterMaxSizeDiff=0.162544;ClusterMaxEditDist=0.315789;PBcalls=17;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=132;DistBack=-6;DistForward=-1;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=20:11281580-11281572;PctSeqSimilarity=0.9627;PctSizeSimilarity=0.9697;PctRecOverlap=0.9281;SizeDiff=4;StartDistance=-6;EndDistance=0;GTMatch=0;TruScore=95;MatchId=3133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:82:1/1:1:7:0:8:1/1:0:6:0:6:1/1:0:23:./.:.:.:.:.:.
chr20	12539455	HG3_PB_SVrefine2Falcon1Dovetail_11458	AA	CAAACAAAACAAAACTATATATATATATATATATACACACACACACACACACACATTATTAAAATTCAGATTTAAATAAACTGACTATAAAAAAGTACTTTTGAAACAAAAACTTTAATCATGATTATATATATT	20	PASS	ClusterIDs=HG4_Ill_MetaSV_2944:HG3_PB_SVrefine2PBcRDovetail_9031:HG4_Ill_SVrefine2DISCOVARDovetail_12839:HG4_PB_pbsv_18395:HG2_PB_pbsv_18476:HG3_Ill_SVrefine2DISCOVARDovetail_13035:HG2_10X_SVrefine210Xhap12_12900:HG3_PB_assemblyticsfalcon_15265:HG3_PB_SVrefine2Falcon1Dovetail_11458:HG2_PB_SVrefine2PB10Xhap12_13491:HG2_Ill_SVrefine2DISCOVARplusDovetail_7463:HG2_Ill_MetaSV_2849;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11458:HG3_PB_assemblyticsfalcon_15265;NumExactMatchSVs=2;ClusterMaxShiftDist=0.184739;ClusterMaxSizeDiff=0.184739;ClusterMaxEditDist=0.280992;PBcalls=6;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=133;DistBack=-2;DistForward=-1;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=20:12539457-12539454;PctSeqSimilarity=0.9734;PctSizeSimilarity=0.9549;PctRecOverlap=0.9478;SizeDiff=6;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=95;MatchId=3134.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:43:0|1:40:1:5:38:0|1:13:0:0:6:0/1:14:8:./.:.:.:.:.:.
chr20	13046535	HG2_PB_SVrefine2PBcRplusDovetail_6356	A	ATTTCACATAGTTACCATTTTCTTCCTTTTTTTGGTGAGAACATTTAGGATCTACTTTCTTATTAATTTCAAGTATACAATATATTATTAACTACAGTCACCATGCTGTACATTAGGTCTCCAGAAATTATTCATACTACATAATTGCAACGTTGTACCCTTTGACAAGTATCCCCCTATTTTCACCATGCCCCCAGGCCTGGCAACCACCATTCTACTCTCTGCTCCTATGATTTCAATGTTTTTAGATTTCACACGTAAGTGAGATCATATGGTATTTGTCTTTCTTATTTCCCTTAGTATAAAGTCCTCCAGATGCATCCATGTTGTTGCAAATGTCCTCTTTTAAGCCTGAAGGGTATTCCATTGTGTATGAATACCATATTTCTTTATCCATTCATCTATGATGGACACTTGGGTTGTTTACATATCTTGTCTATTGTGAGTAATGCTACAATAAACACAGGAGTGCAAATATCTCTTGGAGATAGTGATGTCATTTACTTTGGATATACACCAAGAAGTGAGATTGCTACATCATATGGTAGTTCCATTTTTAAATTTTTTTGGAACCTCCATATTGTTTTTCATAACGGCTTCATCAATTTACCTTCCCACCATCAGTGAACAAGAGTTCCCTTTTCTCCACAAGAGTTCTTTTCTTGTCTTTTTAATAAGGTCCATTCTCACAGATAAGAGGTGATTTCTCATTGTGGTTTTCATTTGCATTTCCCTGATGATTTGTGACACTGACCTATTTTTAATATACCTGTTGGTCATTTGTATGTCTTTTTTGAGAAATATCTGTTTGGGTCTCTTGCCCATTTTTTAATCAAGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGCTACTGAATTGTTTGGATTCCTTATGTATTCTGAGTAATAACACCTTATAAGATATATGGTTTGCAAATATTTTCTCCCATTCTGTAGGTTGCCTCTTCACTCTGTTTATTATTTCCTTTGTTGTGAAGAAACTTTTTAATTTGATGCAATTCCATTTTTTGGTTTTTTTTTTTTTTTTGGTTTTGTTTTTGTTGCCTGTGTTTTGAGATCATAGCAAAAAATTCACTGCCCAGATCAATGTCAAGATTTTTCCCTAAGTTTCTTTCTAATAG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9032:HG3_PB_pbsv_18174:HG4_PB_pbsv_18396:HG2_PB_pbsv_18477:HG4_PB_assemblyticsfalcon_15031:HG4_PB_SVrefine2Falcon1Dovetail_11486:HG4_PB_HySA_26677:HG4_PB_HySA_26676:HG3_PB_HySA_27625:HG2_PB_HySA_33440:HG4_Ill_MetaSV_2945:HG2_PB_PB10Xdip_18040:HG2_10X_SVrefine210Xhap12_12904:HG3_PB_SVrefine2Falcon1Dovetail_11459:HG4_Ill_SVrefine2DISCOVARDovetail_12840:HG3_Ill_SVrefine2DISCOVARDovetail_13038:HG2_PB_SVrefine2PBcRplusDovetail_6356:HG2_PB_SVrefine2PB10Xhap12_13492:HG2_PB_SVrefine2Falcon2Bionano_9090:HG2_PB_SVrefine2Falcon1plusDovetail_6853:HG2_Ill_SVrefine2DISCOVARplusDovetail_7464:HG4_PB_SVrefine2PBcRDovetail_9274;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7464:HG2_PB_SVrefine2Falcon1plusDovetail_6853:HG2_PB_SVrefine2Falcon2Bionano_9090:HG2_PB_SVrefine2PB10Xhap12_13492:HG2_PB_SVrefine2PBcRplusDovetail_6356:HG3_Ill_SVrefine2DISCOVARDovetail_13038:HG4_Ill_SVrefine2DISCOVARDovetail_12840;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0617592;ClusterMaxSizeDiff=0.0617592;ClusterMaxEditDist=0.167874;PBcalls=17;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=1144;DistBack=1579;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=273;REFWIDENED=20:13046536-13046808;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9965;PctRecOverlap=0.9809;SizeDiff=-4;StartDistance=-20;EndDistance=-20;GTMatch=0;TruScore=99;MatchId=3135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:108:./.:0:0:0:0:./.:0:0:0:0:1/1:0:33:0/1:25:145:.:987:.
chr20	13931992	HG2_10X_SVrefine210Xhap12_12905	T	TGCTCACTCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGATGGATCACGAGGTCAGGAGATCGAAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGTCACGCACCTACAGTCCCAGCCTGGGGAGGCTGAGGCAGGAGAATCTCTTGAATCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCATGCCACTGCACTCCAGCCTGGGTGACTAGAGTGAGACTCTGTCTCAAAAAAAAAAAGAAAAAAAGAAAGAAAATAAACATCTCAGGGATGGAGAATCCATACATTTTATAGCCAAGTCTTGAATATATGGTAGTAGGTGTATTTAATTACACCTGTAAACCTTTACTATATCTACCACATGCAAAGCATCACACTAAAAAAGATGACAACATACTGTCTTCCCTGTCAGAAGCTCACAATCAAGTTTAAGTAATATCAAACAGAGGTTTCACAAAGCAAAAAAACCACATTTAGAACCTTTTGGAAATTCCAAATTCCAGTAACTGTGTAGGGTACATTGTAAGCATTGTGTTGCATGAATGAATATATTGATAATTTGTAATACTAAGTTCTCTTAAATCAGAATGGGCTTTTTTATTCTAATATGCAAAATGGAGGATAATAATTAACCATTTAAATAACCAATTAACATCCTTCACAAAGATGTTAGGAGGAATAAATGGTATATATGAAGGGTTTTTATAAAGTTTGTTATATAACTGTAAGGATATGATATTGAATATAAATTCTGAATATAATAACATAAGGTGTCTAAATTTTATACTAAATGCCCAATATGACAATGTAAGTGAAATCTTGAGGCTATCTTTACTACCAGGTTCCTTTCTCAGGAAACAGCCCCTCAGGCTGCTCAGATAGTATCAAAGAATTAAAACTTACCAGAACTGAAATATCCTATTTATTAGTCAAATTAATTATCTATTGGACAAAGATGTTAATCTCAAAACAAAAAGATTGTGTCTGTTAAACTGAAGAAGAGATGGAACTGAACACTCTGGTGAAACTGCTGAGTGCTGAGAGCCAGGTGACTTTTTCCTTGTTTTCAGAGCTTTCACTGATGCTCATGGTGGTGATGGCTGTCAGGAGACAAACTCATAAAGGGGTCCCCAGAGAAACTCCAACCAACCTGCACACTGGGAGAATGGGGTGGAGCCTCGGGAAGTTCATGCTGGTTTGCAGCGGGGAGGAGCCTGGCCTCTCCTGTTCGGGGATTAGTAACCTGGGATTCAATCTGTGAGCCCACTGGCAGGAAGCACACTCTCTCACTTTGCTGAGAGTCCCTGTTTCCCCCTTTTTTTTTCTCTTTTCACCCAATAAACCCTACCCTTCTCACCCTTCAAAGTGTCTGTGAGCCTAATTTTTCATGGTCATTACAAGGAGCCCATTTTTAGTTGAATTAAGCAGAAAGTCCTATAACAGCTTTGGTGCCCAACATGGGGTTCAAGGAAGGGTGAGTGAAATGGCAACTCAAAACCTCTCGCTGTTGCTTCCGAGCCTTCTGGTCCTATGGCATTCCTCTTCTTATTTTCAGGACAGTAATAGCACCTATCTTTTCTTTTACAATACTGGATATAGGCCACACCCATCCCAATGGCCACAGGCACACTGGGAGGATGGTTAGATGGGGCAGCTCCCTGCTCGCCCTTTTCTACTAGCTGAGGTGCACGGACGTATCTGCTGCATGTGTGTGTGGTGTCCAGTGGCCAAGGGGCCCCATGCAGCTGGCTGGCCTTCCCTACCATGCACCCATGTAGTCTCCACTCCCCAACCAGGAAGTCCAACTTTGTCCCACTGCGATGCTTCTCTCTGGTGGAGGAACTATTTGCATAAAAATAAGAAGCTCTTCCCCACTGGCATCCTTTTTCTTCTCTACCCTATCAGCAGTTAACTTTTAATTACTTTTTTTTTTCCTTTTGGAAAACATTTTACTGTTTTCCCAACTATCACTGTTTATATTTTCTGTAGAGTTTTAATTGTGACAGAGGATTTGTGAGGCTAGTTTTAAGCTGTAGCCCATCTGGTGTACTTTGCATGTCTTTCCACAGCAAACTTTGCAGCAGGCCTCCATCTTGTTTTATATCCTGGGGGTATGGCCTGTAACCCCACGGCAAAGCTTTGTTTAGCAATCCTGCCTTAGGGAATGAGTCCTTTCTGGTTTGACATCTGCATGTTTTCCTAGCCCTGTCTCTTACAGGGCTCCACCTGGTGGCTGAGTTTTCTTCTGCCTGTCTTTGTAGCTCTGTATGTGTTGTGTATGTGATGTCTGTAAAAAGACCTCTAGTTAATTTGGCCTAAAGGAAGACAAGCACTTGGATCAAATATTTTTTAAAGAGAAGATAAAAGCTGTGGTAACTTTCAGTTCATGTGACTTTAATCTTTGAGAAATAAAAACAGCCTTAAAGATTATTGGTAAAAAGCAAATGTCATCAAAATATAAATATTTTGGACTAAATGATGCAGGTCACAGGCAAGGCTTGTTAAATGTTTTACGGTTATAAACTGCCTTTTGGGTTTTGAGAACTATTTGACTTGTCTGCTCCACAACTGGTAAGGCCTGGGGACATATGGAACTAACCATGCCCTTAATTAATGCTAGAAGGAATCAAACCTTGGTTGCACCTAGCACACAATTAAAACAACTTACCAGGTTTTATGTTAAAGTTAAAAATTGCTAAAAGTTACCATTATGACATGTAATTGAAACTACTGGAAATAGATTTACATGTGAGGTGTGTAAGAAAAATAATTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCACCCATCCTGGAGTGCAGTGATACGATCTTGGCTCACTGCAAGCTCTGCCTCTGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCACCATGCCCGGCTAATTTTTTGTATTTTTAATAGAGACGGGGTTTCACCATGTTAGCCAGGATCGTCTCGATCTCCTGACCTCGTGATCCGTCCGCCTTGGCCTCTCAAATGCTGAGATTACAGGTGTGAGCCACTGCACCTGGCCTGGTTTTTTTTTTTTTTTTTTTTTAAGACATAGTTTCACTGTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCACAAGTAGCTGGGATTACAGGTGCATGCCATCACACCTGGCTAATTTTTGTATTTTTGGTAGAGATGGGGTTTTGCCACATTGGCCAGCCTGGTCTCAAACTCCTGACCTCAAGTGATCTGCCCACCTCTACCTCCAAAAGTGCTGGGATTACAGGTGTGGCTCACACCTGTACCCACCCTAAAATGTGTCTTTAATAAAAGGTTATAAAAAGGCATGAAAATGTAAATTCTTGCCTAGGGTTAAAGAATTGTTTCAAATTAGATAGGATAAAGCTGAAGGTTCAAACAAATGGTGGAAGGATTGTGGAAATTCATCTTGCGGAAGAAGTTCTAGGTGTGAACATATTGACTAGGTTCAAGGGGGGTATTGTGTGGTTTTTCTCTGGGCTGAGCATTGGAATAAAAGCACAACAGGACACTGTTGGGGCACTGATATGCTCTTTGGCAAAATTTGTAAAGGGTTATAAAAGTTTTTTGCTTCTTTAAAATTTCTGACTCATCATTTTGGCAAAATAAATAACTTATGTCAACCTGGAATTCTATTTCATAACATCAAGTGTTTTAAACTGCTAACATATTTAACAGGCTTCCCAAAATCAAACTTCAGTTTCAAAATTGTCTTTCCTGACACCTAGCTTTTGGATACTTCAGAGGGCCCCTGGAGTGCCCAGAAAAGAGAGGTAAACAGGATGATTTGACTTGTTTAGTGACATGGGATTGCCAAACTGATGTTCAATCTTCTTTAGATTATATGTTCATGAATAATGCTAATACATGTTCCAAAATTGTATGGGATTGCTAAAATTTTAATGTCTGAGTATATGCTATCAATGATAATTAAGGTTGTTATGCTAAGTTATTGTAAACCATGGAGATAACCAAACTTCTTTGTCAATTGTGTTTCTAACTGTAACTACCCTAGACATTTTGTTATTCACAGACAATTGTCTTGTCTTAATCCTTTTCAAAATATGATTTATAATAAGCTATATAATTTTGGCAGGAACTCTCAAATACAGGCTTCTAATAACTTTGGATATTTTAACATTGGAATAAAGAAAAATGTACAGGACTCATGAAGAGCTGAATGTTCATGAATATGATGTGAATCAAGAACTAAATGGGCTAAACTCAGAGAGCTGAAGCAATCTTTTTGACTTTTGCTTGGAATATTGCCAATCCTTTTGTTTTTCAGAGTCAAGGAAACTTATTTTGCACTATTTATGGCCCTTAATAATTGAGTAAGGTATACTCCTGTGAACAAAATTTGGAGCATGTTTGGTCTCTCTGCCAGGTTCCTCTAGAATTCGGAAATTATCTGTGAGTATTTTTAACTTATGGCAATATAGTTATTTGCATCAGAGCAATGAGAATCCATTTTTCTTTTGCGGCAGGACGCAATTGCAGAAACTGGTTGTTTCACCAAGGCTTTGACTGAAAGGATATGATTCCCTTTAAGGAGCCAAGCTCGATTGCAGAGCTGATAAAAGCCCCCTGGAGAAAAAAACTGATCTCATACCCTCATTTATGCAGTCCCTGTACAGTGTTCCTGACCTGTGGTCAGTAAAGAATGTCACTTTCTAACAGGCCCAGGAGTCCCAAGTTTATCTTGGGACCTTAAGAGGATAGGATCACACAACTCACAGGTATTTGAGGGTGGTTGGGCTCAGGATGGTTGGGCTTAGAGTTAAAAGGTCTTATCCAAGATTCCTTGTGGAACAGAGTTCCATCAAATCCAGTCTAAAAGGCCTATATAGAAATAGTTATTCTTGCTGCACTTTATGCAAATAATCAGGCCAAGGATAAGACTAAAATAGGCTGGGTGCGGTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11461:HG4_PB_pbsv_18398:HG2_PB_pbsv_18480:HG2_PB_PB10Xdip_18046:HG3_PB_pbsv_18178:HG2_PB_HySA_33457:HG2_Ill_Spiral_1193:HG3_PB_assemblyticsfalcon_15276:HG2_PB_assemblyticsfalcon_15289:HG4_PB_assemblyticsfalcon_15037:HG2_PB_SVrefine2Falcon1plusDovetail_6856:HG3_PB_SVrefine2PBcRDovetail_9035:HG4_PB_SVrefine2PBcRDovetail_9275:HG4_Ill_SVrefine2DISCOVARDovetail_12844:HG2_PB_SVrefine2Falcon2Bionano_9092:HG2_PB_SVrefine2PB10Xhap12_13494:HG2_PB_SVrefine2PBcRplusDovetail_6358:HG2_10X_SVrefine210Xhap12_12905:HG4_PB_SVrefine2Falcon1Dovetail_11489;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12905:HG2_PB_SVrefine2PBcRplusDovetail_6358;NumExactMatchSVs=2;ClusterMaxShiftDist=0.155717;ClusterMaxSizeDiff=0.155717;ClusterMaxEditDist=0.237288;PBcalls=16;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=5045;DistBack=12310;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=276;REFWIDENED=20:13931993-13932268;PctSeqSimilarity=0.9947;PctSizeSimilarity=0.9984;PctRecOverlap=0.9483;SizeDiff=-8;StartDistance=-257;EndDistance=-257;GTMatch=0;TruScore=98;MatchId=3137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:84:./.:0:2:0:6:./.:0:0:0:0:1/1:0:8:1/1:2:600:.:6267:.
chr20	15106596	HG2_Ill_GATKHCSBGrefine_12051	T	TGTCTGTTTTCTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG	20	PASS	ClusterIDs=HG2_PB_HySA_33475:HG4_PB_assemblyticsfalcon_15052:HG2_PB_pbsv_18491:HG3_PB_pbsv_18187:HG3_PB_assemblyticsfalcon_15297:HG2_PB_assemblyticsfalcon_15305:HG2_PB_PB10Xdip_18051:HG4_PB_SVrefine2Falcon1Dovetail_11493:HG3_PB_SVrefine2Falcon1Dovetail_11466:HG3_Ill_MetaSV_2997:HG3_Ill_GATKHCSBGrefine_11909:HG2_Ill_MetaSV_2851:HG2_Ill_GATKHCSBGrefine_12051:HG2_PB_SVrefine2PB10Xhap12_13499:HG2_PB_SVrefine2Falcon1plusDovetail_6861;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12051:HG2_Ill_MetaSV_2851:HG3_Ill_GATKHCSBGrefine_11909:HG3_Ill_MetaSV_2997;NumExactMatchSVs=4;ClusterMaxShiftDist=0.117851;ClusterMaxSizeDiff=0.117851;ClusterMaxEditDist=0.207972;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=291;DistBack=-7;DistForward=13;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=20:15106597-15106609;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:66:./.:24:8:2:41:1|0:0:17:18:0:0/1:22:8:./.:.:.:.:.:.
chr20	15559229	HG4_Ill_Krunchall_24775	G	GTACAGTATAACAACAAGAAAATGAATCTAAGCCATGAGAAGTCACAATGGAAGT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12910:HG3_PB_pbsv_18188:HG2_PB_HySA_33477:HG2_PB_pbsv_18492:HG2_PB_PB10Xdip_18052:HG4_PB_SVrefine2PBcRDovetail_9280:HG4_PB_SVrefine2Falcon1Dovetail_11494:HG4_PB_HySA_26703:HG4_Ill_svaba_22574:HG4_Ill_scalpel_16715:HG4_Ill_manta_4158:HG4_Ill_SVrefine2DISCOVARDovetail_12849:HG4_Ill_Krunchall_24775:HG4_Ill_GATKHC_28963:HG4_Ill_GATKHCSBGrefine_12460:HG4_Ill_250bpfermikitraw_23734:HG4_Ill_150bpfermikitraw_22840:HG3_PB_SVrefine2PBcRDovetail_9040:HG3_PB_SVrefine2Falcon1Dovetail_11467:HG3_Ill_svaba_22839:HG3_Ill_manta_3999:HG3_Ill_SVrefine2DISCOVARDovetail_13045:HG3_Ill_Krunchall_24013:HG3_Ill_GATKHC_28905:HG3_Ill_GATKHCSBGrefine_11910:HG3_Ill_250bpfermikitraw_23439:HG3_Ill_150bpfermikitraw_22745:HG2_PB_SVrefine2PBcRplusDovetail_6365:HG2_PB_SVrefine2PB10Xhap12_13500:HG2_PB_SVrefine2Falcon2Bionano_9097:HG2_PB_SVrefine2Falcon1plusDovetail_6862:HG2_Ill_svaba_22616:HG2_Ill_scalpel_17095:HG2_Ill_manta_4894:HG2_Ill_SVrefine2DISCOVARplusDovetail_7472:HG2_Ill_Krunchall_24459:HG2_Ill_GATKHC_28985:HG2_Ill_GATKHCSBGrefine_12052:HG2_Ill_FB_15475:HG2_Ill_250bpfermikitraw_24121:HG2_Ill_150bpfermikitraw_22717;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12910:HG4_PB_SVrefine2PBcRDovetail_9280:HG4_PB_SVrefine2Falcon1Dovetail_11494:HG4_PB_HySA_26703:HG4_Ill_svaba_22574:HG4_Ill_scalpel_16715:HG4_Ill_manta_4158:HG4_Ill_SVrefine2DISCOVARDovetail_12849:HG4_Ill_Krunchall_24775:HG4_Ill_GATKHC_28963:HG4_Ill_GATKHCSBGrefine_12460:HG4_Ill_250bpfermikitraw_23734:HG4_Ill_150bpfermikitraw_22840:HG3_PB_SVrefine2PBcRDovetail_9040:HG3_PB_SVrefine2Falcon1Dovetail_11467:HG3_Ill_svaba_22839:HG3_Ill_manta_3999:HG3_Ill_SVrefine2DISCOVARDovetail_13045:HG3_Ill_Krunchall_24013:HG3_Ill_GATKHC_28905:HG3_Ill_GATKHCSBGrefine_11910:HG3_Ill_250bpfermikitraw_23439:HG3_Ill_150bpfermikitraw_22745:HG2_PB_SVrefine2PBcRplusDovetail_6365:HG2_PB_SVrefine2PB10Xhap12_13500:HG2_PB_SVrefine2Falcon2Bionano_9097:HG2_PB_SVrefine2Falcon1plusDovetail_6862:HG2_Ill_svaba_22616:HG2_Ill_scalpel_17095:HG2_Ill_manta_4894:HG2_Ill_SVrefine2DISCOVARplusDovetail_7472:HG2_Ill_Krunchall_24459:HG2_Ill_GATKHC_28985:HG2_Ill_GATKHCSBGrefine_12052:HG2_Ill_FB_15475:HG2_Ill_250bpfermikitraw_24121:HG2_Ill_150bpfermikitraw_22717;NumExactMatchSVs=37;ClusterMaxShiftDist=0.106195;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.307692;PBcalls=13;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=54;DistBack=-54;DistForward=-1;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=56;REFWIDENED=20:15559230-15559285;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:1:25:1:20:./.:1:22:3:38:1/1:0:45:./.:.:.:.:.:.
chr20	16169503	HG3_PB_assemblyticsfalcon_15309	GC	AGAGTACAGTGTCTGTGCAGTGCAGCGTGTGTGCAGTGCAGTGTGTGTACAGAACGGTGTGTGTGCAGTGCAGTGTGTGTACTATGCAATGTGTGTACTGTGCAGTGTGTGTGCAGTGCAGTGTGTGTACTATACAGCATGTGTGT	20	PASS	ClusterIDs=HG4_PB_pbsv_18413:HG2_PB_SVrefine2PB10Xhap12_13502:HG4_PB_SVrefine2PBcRDovetail_9284:HG4_Ill_SVrefine2DISCOVARDovetail_12856:HG3_PB_assemblyticsfalcon_15309:HG3_PB_SVrefine2Falcon1Dovetail_11470:HG2_Ill_SVrefine2DISCOVARplusDovetail_7474:HG4_PB_SVrefine2Falcon1Dovetail_11497:HG3_PB_pbsv_18191:HG2_PB_HySA_33482:HG4_PB_HySA_26711;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7474:HG3_PB_SVrefine2Falcon1Dovetail_11470:HG3_PB_assemblyticsfalcon_15309:HG4_Ill_SVrefine2DISCOVARDovetail_12856:HG4_PB_SVrefine2PBcRDovetail_9284;NumExactMatchSVs=5;ClusterMaxShiftDist=0.156463;ClusterMaxSizeDiff=0.156463;ClusterMaxEditDist=0.190476;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=144;DistBack=-2;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=944;REFWIDENED=20:16168559-16169502;PctSeqSimilarity=0.9967;PctSizeSimilarity=1;PctRecOverlap=0.9521;SizeDiff=0;StartDistance=6;EndDistance=7;GTMatch=0;TruScore=98;MatchId=3140.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:43:0|1:29:3:6:28:0|1:41:0:1:40:0/1:17:5:./.:.:.:.:.:.
chr20	16479494	HG4_Ill_SVrefine2DISCOVARDovetail_12861	G	GCATTTTTTTTTTTAATTTTTTATTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4877:HG2_PB_pbsv_18500:HG4_PB_pbsv_18422:HG4_PB_HySA_26724:HG4_Ill_manta_4160:HG4_PB_SVrefine2PBcRDovetail_9288:HG4_Ill_SVrefine2DISCOVARDovetail_12861:HG4_Ill_MetaSV_2950:HG4_Ill_GATKHCSBGrefine_12469:HG2_Ill_MetaSV_2853:HG4_PB_SVrefine2Falcon1Dovetail_11503:HG3_PB_SVrefine2Falcon1Dovetail_11474:HG2_PB_SVrefine2Falcon1plusDovetail_6866:HG2_PB_HySA_33489;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_2853:HG4_Ill_GATKHCSBGrefine_12469:HG4_Ill_MetaSV_2950:HG4_Ill_SVrefine2DISCOVARDovetail_12861:HG4_PB_SVrefine2PBcRDovetail_9288;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0633484;ClusterMaxSizeDiff=0.0633484;ClusterMaxEditDist=0.183161;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=325;DistBack=58285;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=20:16479495-16479503;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:29:0|1:34:0:0:25:0|1:12:0:0:12:0/1:23:28:0/1:8:51:.:.:.
chr20	16792929	HG3_Ill_Krunchall_24025	A	AAGAAGGTAGATCATTCTGTATCAATCTAGAAGACACCATAGATGAATGAGTAGAAATTACTCC	20	PASS	ClusterIDs=HG3_PB_pbsv_18194:HG3_Ill_svaba_22851:HG2_PB_pbsv_18502:HG3_Ill_SVrefine2DISCOVARDovetail_13050:HG3_Ill_Krunchall_24025:HG3_Ill_GATKHC_28917:HG3_Ill_GATKHCSBGrefine_11916:HG3_Ill_250bpfermikitraw_23449:HG2_Ill_svaba_22628:HG2_Ill_SVrefine2DISCOVARplusDovetail_7478:HG2_Ill_Krunchall_24470:HG2_Ill_GATKHC_28998:HG2_Ill_GATKHCSBGrefine_12059:HG2_Ill_250bpfermikitraw_24131:HG3_PB_HySA_27649:HG2_PB_HySA_33490;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24131:HG2_Ill_GATKHCSBGrefine_12059:HG2_Ill_GATKHC_28998:HG2_Ill_Krunchall_24470:HG2_Ill_SVrefine2DISCOVARplusDovetail_7478:HG2_Ill_svaba_22628:HG3_Ill_250bpfermikitraw_23449:HG3_Ill_GATKHCSBGrefine_11916:HG3_Ill_GATKHC_28917:HG3_Ill_Krunchall_24025:HG3_Ill_SVrefine2DISCOVARDovetail_13050:HG3_Ill_svaba_22851;NumExactMatchSVs=12;ClusterMaxShiftDist=0.104478;ClusterMaxSizeDiff=0.0895522;ClusterMaxEditDist=0.291971;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=63;DistBack=133738;DistForward=35;DistMin=35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=73;REFWIDENED=20:16792930-16793002;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:./.:10:3:4:9:./.:3:35:10:0:0/1:13:20:./.:.:.:.:.:.
chr20	16875029	HG3_Ill_GATKHCSBGrefine_11917	C	CAAAAAATAAAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACTGTGAAACCCCGTCTCTACTAAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAATAAATAAAAAAAAAATAAAAAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6370:HG4_PB_HySA_26726:HG2_PB_assemblyticsfalcon_15321:HG4_PB_pbsv_18424:HG2_PB_PB10Xdip_18093:HG2_PB_SVrefine2Falcon1plusDovetail_6868:HG3_PB_pbsv_18195:HG2_PB_HySA_33491:HG2_PB_SVrefine2PB10Xhap12_13511:HG4_PB_SVrefine2Falcon1Dovetail_11505:HG3_PB_HySA_27650:HG2_PB_pbsv_18503:HG3_PB_assemblyticsfalcon_15316:HG3_Ill_MetaSV_2999:HG3_Ill_GATKHCSBGrefine_11917:HG3_PB_SVrefine2Falcon1Dovetail_11476:HG2_PB_SVrefine2Falcon2Bionano_9101:HG3_PB_SVrefine2PBcRDovetail_9044;NumClusterSVs=18;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_11917:HG3_Ill_MetaSV_2999;NumExactMatchSVs=2;ClusterMaxShiftDist=0.124077;ClusterMaxSizeDiff=0.124077;ClusterMaxEditDist=0.185022;PBcalls=16;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=334;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=20:16875030-16875043;PctSeqSimilarity=0.9823;PctSizeSimilarity=0.9738;PctRecOverlap=0.9767;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:41:./.:10:14:14:18:./.:0:1:24:0:0/1:25:12:0/1:8:41:.:.:.
chr20	17177831	HG2_Ill_GATKHCSBGrefine_12063	A	AGGGCAGGAGGGAGGAGGGAGGGCAGGGGGAGGGAGGGTGGGAAGGAAAGAAGGAAAGAAGGGAGGGAGGTGGGGAGTAGGGGAGGAGGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12917:HG2_PB_HySA_33496:HG4_PB_HySA_26734:HG2_PB_pbsv_18507:HG2_Ill_breakscan11_4879:HG3_PB_pbsv_18198:HG4_PB_pbsv_18428:HG3_PB_HySA_27655:HG4_Ill_GATKHCSBGrefine_12473:HG4_Ill_250bpfermikitraw_23751:HG2_Ill_scalpel_17104:HG2_Ill_SpiralSDKrefine_9725:HG2_Ill_250bpfermikitraw_24139:HG4_Ill_svaba_22593:HG3_Ill_svaba_22854:HG3_Ill_GATKHC_28924:HG3_Ill_GATKHCSBGrefine_11920:HG2_Ill_svaba_22634:HG2_Ill_manta_4899:HG2_Ill_GATKHC_29008:HG2_Ill_GATKHCSBGrefine_12063:HG2_PB_PB10Xdip_18095:HG4_PB_SVrefine2PBcRDovetail_9293:HG4_Ill_SVrefine2DISCOVARDovetail_12864:HG2_Ill_SVrefine2DISCOVARplusDovetail_7481:HG2_10X_SVrefine210Xhap12_12918:HG2_PB_SVrefine2PB10Xhap12_13513:HG3_PB_SVrefine2PBcRDovetail_9046:HG3_Ill_SVrefine2DISCOVARDovetail_13053:HG2_PB_SVrefine2PBcRplusDovetail_6373:HG2_PB_SVrefine2Falcon2Bionano_9104;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12063:HG2_Ill_GATKHC_29008:HG2_Ill_manta_4899:HG2_Ill_svaba_22634:HG3_Ill_GATKHCSBGrefine_11920:HG3_Ill_GATKHC_28924:HG3_Ill_svaba_22854:HG4_Ill_svaba_22593;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0558659;ClusterMaxSizeDiff=0.0558659;ClusterMaxEditDist=0.256983;PBcalls=12;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=89;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=20:17177795-17177850;PctSeqSimilarity=0.9944;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:0:22:1:20:./.:1:18:2:14:./.:1:15:./.:.:.:.:.:.
chr20	17639589	HG2_PB_SVrefine2Falcon2Bionano_9105	T	TCTTTTTACCCTGATTCTGGGCTCCCTCTCCTTTTTGGCCCTGGTTCTGGGCTCCCTCGGCCTTTTTGCCCTGGTTCTGAGCCCCCTCGGCCTTCTTGCCCTGGTTCTGGGCCCCCTCAGCCTTCTTGCCCTGGTTCTGGGCCCCTTCTACTTTTTTGCCCTGGTTCTGAGCACCCTCGGCCTTCTTGCCCTGGTTCTGGGCCCCCTCGGCCTTCTTGCCCTGGTTCTGGGCCCCCTCGGCCTTCTTGCCCTGGTTCTGGGCCCCCTCGGCCTTCTTGCCCTGGTTCTGGGCCCCCTCGGCCTTCTTGCCCTGGTTCTGGGCCCCCTCGGCCTTCTTGCCCTGGTTCGGGGTCCCCTCGGCCTTCTTGCCCTGGTTCTGGGCCCCCTCGGCCTTCTTGCCCTGGTTCTGGGCCCCCTCGGCCTTCTTGCCCTGGTTCGGGGTCCCCTCGGCCTTCTTGCCCTGGTTCGGGGTCCCCTCGGC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9294:HG2_PB_pbsv_18509:HG3_PB_HySA_27658:HG2_PB_HySA_33499:HG2_PB_PB10Xdip_18096:HG4_PB_HySA_26736:HG3_PB_SVrefine2Falcon1Dovetail_11478:HG4_PB_SVrefine2Falcon1Dovetail_11507:HG2_PB_SVrefine2Falcon1plusDovetail_6872:HG2_PB_SVrefine2PBcRplusDovetail_6374:HG2_PB_SVrefine2PB10Xhap12_13514:HG2_PB_SVrefine2Falcon2Bionano_9105:HG3_PB_SVrefine2PBcRDovetail_9047;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9105:HG2_PB_SVrefine2PB10Xhap12_13514:HG2_PB_SVrefine2PBcRplusDovetail_6374;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0685959;ClusterMaxSizeDiff=0.0664523;ClusterMaxEditDist=0.223656;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=480;DistBack=1344;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=654;REFWIDENED=20:17639590-17640243;PctSeqSimilarity=0.982;PctSizeSimilarity=1;PctRecOverlap=0.4428;SizeDiff=0;StartDistance=-268;EndDistance=-268;GTMatch=0;TruScore=80;MatchId=3145.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:88:1/1:0:16:0:9:./.:0:2:0:4:./.:0:4:0/1:4:13:.:.:.
chr20	17759207	HG4_Ill_Krunchall_24796	T	TCTCCCTCTCCCTCTCCCCACGGTCTCCCTCTCCCTCTCTCTCCACAGTCTCCCTCTGATGCCGAGCCCAAGCTG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22739:HG4_PB_assemblyticsfalcon_15081:HG4_PB_pbsv_18430:HG3_PB_assemblyticsfalcon_15326:HG2_PB_PB10Xdip_18097:HG4_Ill_svaba_22597:HG4_Ill_Krunchall_24796:HG4_Ill_GATKHC_28990:HG4_Ill_GATKHCSBGrefine_12474:HG3_Ill_svaba_22860:HG3_Ill_GATKHC_28931:HG3_Ill_GATKHCSBGrefine_11923:HG3_Ill_250bpfermikitraw_23461:HG3_Ill_150bpfermikitraw_22764:HG2_PB_assemblyticsfalcon_15333:HG2_Ill_svaba_22640:HG2_Ill_Krunchall_24488:HG2_Ill_GATKHC_29014:HG2_Ill_GATKHCSBGrefine_12066:HG2_Ill_250bpfermikitraw_24145;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22739:HG4_Ill_svaba_22597:HG4_Ill_Krunchall_24796:HG4_Ill_GATKHC_28990:HG4_Ill_GATKHCSBGrefine_12474:HG3_Ill_svaba_22860:HG3_Ill_GATKHC_28931:HG3_Ill_GATKHCSBGrefine_11923:HG3_Ill_250bpfermikitraw_23461:HG3_Ill_150bpfermikitraw_22764:HG2_PB_assemblyticsfalcon_15333:HG2_Ill_svaba_22640:HG2_Ill_Krunchall_24488:HG2_Ill_GATKHC_29014:HG2_Ill_GATKHCSBGrefine_12066:HG2_Ill_250bpfermikitraw_24145;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0671141;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.120805;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=1;DistForward=4;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=74;REFWIDENED=20:17759208-17759281;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:63:1/1:0:7:1:13:./.:1:18:0:9:1/1:0:40:./.:.:.:.:.:.
chr20	18670548	HG2_10X_SVrefine210Xhap12_12922	G	GGGCAGGAGGATCACTTGAGCCTGGGAGTTCAAGGCTACAGTGAGCTCAGATTGTGCCACTGTACTCCAACCTGGCTGACGGAGCAAGACATTGTCACTCAAAAAATAAAAAATAAAAAAAATAGTGGCTGGGTATGGCGGCTCATGCCTTAATCCCAGCACACTTTGGGAGGCTGA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_18101:HG3_PB_assemblyticsfalcon_15334:HG4_PB_assemblyticsfalcon_15091:HG2_PB_pbsv_18514:HG4_PB_HySA_26743:HG4_PB_pbsv_18437:HG3_PB_HySA_27663:HG3_PB_SVrefine2Falcon1Dovetail_11482:HG4_PB_SVrefine2Falcon1Dovetail_11511:HG4_Ill_MetaSV_2953:HG4_Ill_GATKHCSBGrefine_12480:HG3_PB_SVrefine2PBcRDovetail_9051:HG3_Ill_manta_4003:HG3_Ill_MetaSV_3002:HG3_Ill_GATKHCSBGrefine_11928:HG2_10X_SVrefine210Xhap12_12922:HG2_PB_SVrefine2PB10Xhap12_13518:HG4_Ill_SVrefine2DISCOVARDovetail_12870:HG3_PB_pbsv_18205:HG3_Ill_SVrefine2DISCOVARDovetail_13057:HG2_PB_SVrefine2PBcRplusDovetail_6378:HG2_PB_SVrefine2Falcon1plusDovetail_6877:HG2_Ill_MetaSV_2856;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12922:HG3_Ill_GATKHCSBGrefine_11928:HG3_Ill_MetaSV_3002:HG3_Ill_manta_4003:HG3_PB_SVrefine2PBcRDovetail_9051:HG4_Ill_GATKHCSBGrefine_12480:HG4_Ill_MetaSV_2953:HG4_PB_SVrefine2Falcon1Dovetail_11511;NumExactMatchSVs=8;ClusterMaxShiftDist=0.116022;ClusterMaxSizeDiff=0.110497;ClusterMaxEditDist=0.291209;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=176;DistBack=5;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=31;REFWIDENED=20:18670537-18670567;PctSeqSimilarity=0.9947;PctSizeSimilarity=1;PctRecOverlap=0.9322;SizeDiff=0;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=97;MatchId=3147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:38:0|1:24:2:2:35:./.:1:15:15:0:0/1:26:14:./.:.:.:.:.:.
chr20	19644040	HG2_PB_SVrefine2Falcon2Bionano_9111	G	GCCTCCTCCTCCACCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCTCCACCTCCTCCTCTACCTCCTGCACCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTTCTCCTCCTCCTCCACCTCCTCCTCCTCCACCTCCTCCTCCTCCACCTCCTCCTCCTCCTCTACCTCCTGCACCTCCTCCTCTACCTCCTGCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCACCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCACCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCACCTCCTCCTCCACCTCCACCTCCTCCTCCACCTCCACCTCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6880:HG4_PB_pbsv_18442:HG2_PB_PB10Xdip_18105:HG3_PB_HySA_27671:HG4_PB_HySA_26750:HG2_PB_HySA_33515:HG2_PB_pbsv_18518:HG4_PB_SVrefine2PBcRDovetail_9303:HG3_PB_SVrefine2PBcRDovetail_9055:HG3_PB_SVrefine2Falcon1Dovetail_11486:HG2_PB_SVrefine2PB10Xhap12_13522:HG2_PB_SVrefine2PBcRplusDovetail_6382:HG2_PB_SVrefine2Falcon2Bionano_9111:HG4_PB_SVrefine2Falcon1Dovetail_11515;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9111:HG2_PB_SVrefine2PBcRplusDovetail_6382;NumExactMatchSVs=2;ClusterMaxShiftDist=0.151697;ClusterMaxSizeDiff=0.151697;ClusterMaxEditDist=0.21638;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=498;DistBack=23003;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=100;REFWIDENED=20:19644041-19644140;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.988;PctRecOverlap=0.9599;SizeDiff=6;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=98;MatchId=3148.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:0:13:0:19:./.:0:19:1:18:./.:0:6:0/1:4:22:.:.:.
chr20	20439519	HG2_Ill_SVrefine2DISCOVARplusDovetail_7496	T	TATATAGACCTATATATATAGACCTATATATATATAGACCTATATATATAGACCTATATATATAGACCTATATATATATAGACCTATATATATATAGACCTATATATATATATAGACCTATATATATATAGACCTATATATATATATATATAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9056:HG2_PB_HySA_33540:HG4_Ill_SVrefine2DISCOVARDovetail_12882:HG2_Ill_SVrefine2DISCOVARplusDovetail_7496:HG4_PB_HySA_26769:HG3_PB_assemblyticsfalcon_15359:HG3_PB_SVrefine2Falcon1Dovetail_11495:HG2_PB_SVrefine2PB10Xhap12_13531:HG2_PB_pbsv_18525:HG2_PB_PB10Xdip_18131:HG3_PB_HySA_27693:HG3_PB_pbsv_18216:HG4_PB_SVrefine2Falcon1Dovetail_11523:HG2_PB_SVrefine2Falcon2Bionano_9114:HG2_PB_SVrefine2PB10Xhap12_13530:HG2_PB_SVrefine2Falcon1plusDovetail_6888:HG3_Ill_SVrefine2DISCOVARDovetail_13068:HG2_PB_SVrefine2PBcRplusDovetail_6388;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7496:HG4_Ill_SVrefine2DISCOVARDovetail_12882;NumExactMatchSVs=2;ClusterMaxShiftDist=0.185185;ClusterMaxSizeDiff=0.185185;ClusterMaxEditDist=0.31068;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=152;DistBack=11;DistForward=183227;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=202;REFWIDENED=20:20439319-20439520;PctSeqSimilarity=0.9841;PctSizeSimilarity=0.9868;PctRecOverlap=0.3464;SizeDiff=2;StartDistance=99;EndDistance=99;GTMatch=1;TruScore=77;MatchId=3149.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:97:1/1:1:64:0:12:./.:11:17:4:20:0/1:11:31:./.:.:.:.:.:.
chr20	21026691	HG4_Ill_SVrefine2DISCOVARDovetail_12885	G	GTCAAGGCTTTTGTGCTGATCCACGTTCATTTGCTACTCTGTGGATGTTATTTATTTCATAGGTATTGAAAGATGGCAGCATTTACTAACACACACACATGCACAAGTGTACACACACATAGCCGATTGTATTTTCCAAAGGTGACTTCACTAGTATCTTCTAGAACTTCCCTGTCAACAAGTGGAGTCTAATTCCCTTGCCCTTGAATCTGGACTGTCTTGTGAT	20	PASS	ClusterIDs=HG2_Ill_Spiral_1197:HG3_PB_pbsv_18218:HG4_PB_pbsv_18453:HG3_PB_assemblyticsfalcon_15362:HG2_PB_assemblyticsfalcon_15376:HG4_PB_assemblyticsfalcon_15118:HG2_PB_PB10Xdip_18135:HG2_Ill_breakscan11_4881:HG3_PB_SVrefine2Falcon1Dovetail_11497:HG4_PB_SVrefine2PBcRDovetail_9308:HG4_Ill_manta_4166:HG4_Ill_SVrefine2DISCOVARDovetail_12885:HG4_Ill_MetaSV_2957:HG4_Ill_GATKHCSBGrefine_12489:HG4_Ill_Cortex_2081:HG3_Ill_MetaSV_3007:HG3_Ill_GATKHCSBGrefine_11941:HG3_Ill_Cortex_2117:HG2_PB_SVrefine2PBcRplusDovetail_6390:HG2_PB_SVrefine2PB10Xhap12_13533:HG2_PB_SVrefine2Falcon2Bionano_9116:HG2_PB_SVrefine2Falcon1plusDovetail_6890:HG2_Ill_manta_4903:HG2_Ill_SVrefine2DISCOVARplusDovetail_7498:HG2_Ill_MetaSV_2861:HG2_Ill_GATKHCSBGrefine_12079:HG2_Ill_Cortex_4884:HG2_10X_SVrefine210Xhap12_12932:HG4_PB_SVrefine2Falcon1Dovetail_11525:HG2_PB_pbsv_18527:HG4_PB_HySA_26775:HG4_Ill_Spiral_1420:HG3_Ill_Spiral_18681;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12932:HG2_Ill_Cortex_4884:HG2_Ill_GATKHCSBGrefine_12079:HG2_Ill_MetaSV_2861:HG2_Ill_SVrefine2DISCOVARplusDovetail_7498:HG2_Ill_manta_4903:HG2_PB_SVrefine2Falcon1plusDovetail_6890:HG2_PB_SVrefine2Falcon2Bionano_9116:HG2_PB_SVrefine2PB10Xhap12_13533:HG2_PB_SVrefine2PBcRplusDovetail_6390:HG3_Ill_Cortex_2117:HG3_Ill_GATKHCSBGrefine_11941:HG3_Ill_MetaSV_3007:HG4_Ill_Cortex_2081:HG4_Ill_GATKHCSBGrefine_12489:HG4_Ill_MetaSV_2957:HG4_Ill_SVrefine2DISCOVARDovetail_12885:HG4_Ill_manta_4166:HG4_PB_SVrefine2PBcRDovetail_9308;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0657895;ClusterMaxSizeDiff=0.0653595;ClusterMaxEditDist=0.205689;PBcalls=15;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=225;DistBack=23916;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=20:21026692-21026694;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:67:./.:7:17:0:29:1/1:0:33:2:21:1/1:0:27:./.:.:.:.:.:.
chr20	21102359	HG2_PB_SVrefine2Falcon2Bionano_9118	G	GATAGCACAAAATGGACTATTTCCATCATTGCAGAAAGTCCTATTGGACAGAGTCTCTCTGACTGGTTCTTTATTATAGCCTTGGCTTCATTATCTGGGACTTTGTCCTTGAGTGTTGGCTCTTAATATTACTGTTCCAGGTTTTTATTACCATCTAGATAGTCACATAAATCCTCACTGAGAATTTTATGGAAAGATATTTTGATGCATTTGTGCAATTTCTGCATGGAATGCTTGTGTATTAGTCAGGATAAGCAATGCCAGCTGCTGAGACAAACGACCTTAAAATATCAGTTTTTAATTGATTTATTTATTGATTTATTGCTCAGTTAAGATTGATTTATTGCTCAAGTCACAGTCCCCTGCTTATTGCAGTCAGTTACTTTTCTTCCAGGGCCTCAGAGTTCTCCAGTGGATTATTTGCACCTAGCCAGGCAACTAATGGAAACAGGAAGATTGTGCAGGATGTTTTGGGATCAGGCCTGGAAGTGGCTACATCACTTTTGCCCACATTTCACTAGTCAGACTTGGTCATGTAGATCCACCTAACGGCTAGCAAGGATGATAAATGCAGTCTTTCTGAGTTTTAAGAAGGAAATTAACCAGAATGGTGAACACATCATGCTGTATCACAGCATGTAGAAAAATGTATTCTATGCATGCTATTCCCAATACGTGAACCGTGTATCTGTAAAAACCCTTCTGGGTCACATAGTATATATTTTACACATCTCATACAAGGAAAATAAAAAATATAGGTAGCTTCAAATGATGAGGATCAAGGCAAAGGATACATATATATAGAGAGAGAATATATATAAGAGAGGATGGACTCTGGAATTGGAACAGGCCTGTGTCCAAATCCTACCACTCTTAATCCTACCACTACCATTGGTCTGACAAGAACACAGTGATAGTGTGACCTTGGGCTAGTTGCTTCAACTTGTGGTGCCCTCAAAGGACTGTTGTAGATCTAAATGAGACTACAAATGCTTGCACCAGTGTACATGTCAGTGACAGAAGGAGTACATTTCAATGGCATACTCATATATGGGACATCACAGCTTTCCCCCCACTTCCTACATTTGATTTGTCTCTACTTTTTTATTTTGGTAGAGTCTTGCCCAGGCTGGCTGTTGCCCAGGCTGGAGTACAATGGCTCATAGCTCACTACAGTCTTGAATTCCTGGGCTCAAGAGATCATTCCACCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGGGTGCCATCATGGCTGGCTAATTAAAAAAAAAATTTTTTTTGTAGAGGGGGGAATCTCACTATGTTGCCCAGGTTGGTCTTGAACTCCTGGGATTAAGTGATCTTCCTACCTTGGCCTCCTGAAGTGGTGGGATTATAGGTGTGAGCCACTTTACCCAGCCTCATTTCTACTTCTAGATCAACTTTTCTAATGGGGTAGGAAGCAATGTCTT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_18136:HG2_PB_pbsv_18529:HG3_PB_pbsv_18220:HG4_PB_HySA_26778:HG2_Ill_breakscan11_4882:HG2_PB_HySA_33545:HG3_PB_SVrefine2Falcon1Dovetail_11499:HG3_Ill_SVrefine2DISCOVARDovetail_13070:HG2_PB_SVrefine2PBcRplusDovetail_6392:HG2_PB_SVrefine2PB10Xhap12_13535:HG2_PB_SVrefine2Falcon2Bionano_9118:HG2_Ill_SVrefine2DISCOVARplusDovetail_7500:HG2_10X_SVrefine210Xhap12_12934:HG4_PB_SVrefine2Falcon1Dovetail_11527:HG3_PB_SVrefine2PBcRDovetail_9059:HG2_PB_SVrefine2Falcon1plusDovetail_6892:HG4_PB_SVrefine2PBcRDovetail_9309:HG3_PB_HySA_27699;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12934:HG2_Ill_SVrefine2DISCOVARplusDovetail_7500:HG2_PB_SVrefine2Falcon2Bionano_9118:HG2_PB_SVrefine2PB10Xhap12_13535:HG2_PB_SVrefine2PBcRplusDovetail_6392;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0706667;ClusterMaxSizeDiff=0.0693333;ClusterMaxEditDist=0.188642;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=1452;DistBack=1226;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=20:21102360-21102362;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:138:1/1:0:46:1:18:1/1:0:9:0:15:1/1:0:40:./.:15:210:.:1465:.
chr20	22452630	HG2_Ill_SVrefine2DISCOVARplusDovetail_7505	C	CCATATACACACAATCACCATTACCACCAAAACACACCTGTGCACCTATACAGCCAACTACACACACTCCACACCACACTCACACCACAGCACACCCACACAAACCTCTCACCCACGCACACACCACACACACATGCACAACACATGCACACATACCCAGACTCACATCACACCCACCACCACACACATACACACCACCACACACATACCATACACACCACACCACCACACACACACACCCCTACACACATACAAACACACCACTACAGACATACACACACCACCACCACACACACCATACACACCAACACACACACACACACGCCACAACACGCACATACCATACACACCACCACGCACATACGCACACACCATCACACACATACTATACACGCCACCACACACATACACAAACACCACACACACCATACACACCACCACACACATACGCACACACCACACACATACCATACACACCACCACGCACACACCACCACACACACCATACACACCACCACACACACCATACACACCACCACACACATACACACACACCACTACAAACATACACACCACCACTCATATACCATACACACCACCACACATACACACCACTACACACATACACACCACTACAGATATACACACCACGACACACATACACACACACCACTACATACACACACACCACCACACACATACCATACACACCAACACACACACGCCACACCACGCACATACCATACACACCACCACACACATACGCACACACCACCACACACACGCACACCAGCACACACATATACACACACCACCACACATACCATACACACCACCACACACATACACACACACCACCACATACATACACACACACCACCTCATATACCATACACACCACACACATACACACCACTACACACATACACACACACCACTACACACATATAAGCCACTACACACATACACACCACTACACACATACCATACACACCACCACACCACCACATACATACACACACACCACTACAAACATACACAAACACCACTACAGACATACACACACCACCACACACATACGCACACACCACCACACACATACACATACCAGCACACACATACACACACAACACATACCATACACACCACCACACACGTACACACACACACACCACCACATACATACACACACACCACTGCACACATACACACACCATCACACACACCATGCACACCACACACACACCACTACACACATACACACACACCACTACATACATACACACAAACCAACACACACACCATACACACCAACACACACATACACGCCATACCACGCACATACCAAACACACCACCACACACCCACAAACACCACCACACACACCATACGCACCACCACACACACGCACACACCACCACACACACCATACACACCACCACACACACCATACACACCATCACACACATATGCACACACACCACCACACACCATACACACCACACACATGCACAAACACCACCACACACATTCCATACACACCACCACACACATACCACACTACCACACACAGCACCACACACCCCACCACACACATACACACACACCACCACACACATACACACACACCACCACACACATACACAAACAGCACCACACACACCATACACACCACCACACACACCATACACATCACCACACACATACCATACAAACCACCACACACACCGCCACACACACACAGCCCACCACACACACACTCCACAACACACGTACACACACACCACCACACGCATACACAAACACCACCACACACACCATACACACCACCACACACATACATACACACCACCACACACACCATACACACCACCACACATACACACACACCACCACACACGTACATACGCACCACCACACACATACACACACAGCACCACACACATACCATA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4884:HG4_PB_pbsv_18462:HG3_PB_pbsv_18228:HG2_PB_pbsv_18539:HG2_PB_SVrefine2Falcon1plusDovetail_6898:HG2_PB_SVrefine2PBcRplusDovetail_6398:HG3_PB_SVrefine2PBcRDovetail_9063:HG3_PB_SVrefine2Falcon1Dovetail_11505:HG3_Ill_SVrefine2DISCOVARDovetail_13076:HG2_Ill_SVrefine2DISCOVARplusDovetail_7505:HG2_PB_SVrefine2Falcon2Bionano_9123:HG4_PB_SVrefine2PBcRDovetail_9314:HG4_Ill_SVrefine2DISCOVARDovetail_12893:HG2_PB_SVrefine2PB10Xhap12_13542:HG4_PB_SVrefine2Falcon1Dovetail_11532:HG3_PB_HySA_27709:HG4_PB_HySA_26786:HG2_PB_HySA_33568:HG2_PB_PB10Xdip_18141;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7505:HG3_Ill_SVrefine2DISCOVARDovetail_13076;NumExactMatchSVs=2;ClusterMaxShiftDist=0.098666;ClusterMaxSizeDiff=0.0981626;ClusterMaxEditDist=0.181323;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1951;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=20:22452631-22452632;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:96:1/1:0:18:0:12:./.:5:29:4:26:1/1:0:17:1/1:2:399:.:2004:.
chr20	22863400	HG4_Ill_150bpfermikitraw_22896	T	TCTTTTTTCTTTCTTTTTCTTTCTTCTCTCTTTCTTTTTGTTTCTTTCTTTCCTTCTTTCTTCTTTTCTTCTTTTTTTCTTTGTTTCTCTCTCTCTCCCCCTCCCTCCCTCCCTCACTCCCCCACTCTCTCTTTCCCTTTCTTCCTTCCTTCCTTCCTTCCTTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7507:HG2_Ill_250bpfermikitraw_24190:HG4_Ill_MetaSV_2961:HG4_Ill_GATKHCSBGrefine_12496:HG4_Ill_150bpfermikitraw_22896:HG3_Ill_MetaSV_3011:HG2_Ill_MetaSV_2865:HG2_Ill_GATKHCSBGrefine_12087:HG3_Ill_GATKHCSBGrefine_11949:HG2_PB_HySA_33573:HG2_PB_PB10Xdip_18142:HG3_Ill_SVrefine2DISCOVARDovetail_13077:HG2_PB_SVrefine2PB10Xhap12_13545:HG2_PB_SVrefine2Falcon2Bionano_9125:HG2_10X_SVrefine210Xhap12_12945:HG3_PB_SVrefine2PBcRDovetail_9065:HG2_PB_SVrefine2Falcon1plusDovetail_6899:HG3_PB_HySA_27716:HG3_PB_SVrefine2Falcon1Dovetail_11508:HG4_PB_pbsv_18464:HG2_PB_pbsv_18541:HG3_PB_pbsv_18232:HG4_PB_SVrefine2Falcon1Dovetail_11533:HG4_PB_SVrefine2PBcRDovetail_9316:HG4_Ill_SVrefine2DISCOVARDovetail_12895:HG2_PB_SVrefine2PBcRplusDovetail_6400:HG2_PB_SVrefine2PB10Xhap12_13544;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12087:HG2_Ill_MetaSV_2865:HG3_Ill_MetaSV_3011:HG4_Ill_150bpfermikitraw_22896:HG4_Ill_GATKHCSBGrefine_12496:HG4_Ill_MetaSV_2961;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.184615;PBcalls=15;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=163;DistBack=-50;DistForward=26074;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=57;REFWIDENED=20:22863394-22863450;PctSeqSimilarity=0.988;PctSizeSimilarity=0.976;PctRecOverlap=0.976;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:66:1/1:0:35:1:16:1/1:0:6:0:12:1/1:0:25:./.:.:.:.:.:.
chr20	22989695	HG2_Ill_250bpfermikitraw_24191	C	CACATATATGTATATATACACATGTGTGTATATGTATATATGTATACATATATGTATATATACACATGTGTGTATATGTGTATATGTAT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24191:HG3_PB_pbsv_18233:HG3_Ill_250bpfermikitraw_23503;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24191:HG3_Ill_250bpfermikitraw_23503;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0222222;ClusterMaxEditDist=0.0777778;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=-297;DistForward=-1;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=242;REFWIDENED=20:22989679-22989920;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:49:1|0:4:45:19:3:./.:3:5:9:1:0/1:22:9:./.:.:.:.:.:.
chr20	23136216	HG2_Ill_MetaSV_2867	A	AAGGGGAGGGGAGGAAGGCGAGGTGAGGGGAGGAGAGGTGAGGGGAGGGGGGGAGGGGAGGGGAGGGAGAGTGAGGAAGAGAGAGAGAAAGGGAGAGAGGAAGGAAAGAAGAAAGGAAGGAAGGAAAGAAGGAAGGAAGGGAGGGAGGGAGGGAGGAAAGAAGGAAGGAAAGGAGGGAGGAAGGGAGGGAAAGAGAGAGAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11535:HG2_PB_pbsv_18544:HG2_PB_HySA_33579:HG2_PB_PB10Xdip_18144:HG2_Ill_breakscan11_4885:HG4_Ill_MetaSV_2963:HG4_Ill_GATKHCSBGrefine_12503:HG3_Ill_GATKHCSBGrefine_11956:HG2_Ill_MetaSV_2867:HG4_PB_HySA_26795:HG2_PB_HySA_33578:HG4_PB_pbsv_18466:HG3_PB_SVrefine2PBcRDovetail_9067:HG3_PB_pbsv_18235:HG2_PB_SVrefine2PB10Xhap12_13547:HG2_PB_SVrefine2PBcRplusDovetail_6403:HG3_Ill_SVrefine2DISCOVARDovetail_13079:HG2_Ill_SVrefine2DISCOVARplusDovetail_7510:HG2_PB_SVrefine2Falcon2Bionano_9127:HG4_Ill_SVrefine2DISCOVARDovetail_12897:HG2_PB_SVrefine2Falcon1plusDovetail_6901:HG4_PB_SVrefine2PBcRDovetail_9318:HG3_PB_SVrefine2Falcon1Dovetail_11510;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_MetaSV_2867:HG3_Ill_GATKHCSBGrefine_11956:HG4_Ill_GATKHCSBGrefine_12503:HG4_Ill_MetaSV_2963;NumExactMatchSVs=4;ClusterMaxShiftDist=0.118519;ClusterMaxSizeDiff=0.114833;ClusterMaxEditDist=0.262911;PBcalls=15;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=200;DistBack=7;DistForward=15;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=49;REFWIDENED=20:23136171-23136219;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9756;PctRecOverlap=0.9805;SizeDiff=-5;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:40:1/1:0:24:1:11:1/1:0:11:1:24:1/1:0:11:./.:.:.:.:.:.
chr20	23248628	HG2_PB_SVrefine2PB10Xhap12_13548	A	AGATAGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGATGGGGTGGGGTGGGGTGGGTGGGGTGGGATGGGATGGGATGGGATGGGATGGGATGGGATGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11536:HG4_PB_HySA_26796:HG3_PB_HySA_27723:HG2_PB_SVrefine2PB10Xhap12_13549:HG2_PB_HySA_33581:HG2_PB_PB10Xdip_18152:HG3_PB_pbsv_18236:HG2_PB_SVrefine2Falcon2Bionano_9128:HG4_PB_SVrefine2PBcRDovetail_9319:HG4_PB_pbsv_18467:HG2_PB_SVrefine2PBcRplusDovetail_6405:HG3_PB_SVrefine2PBcRDovetail_9068:HG3_PB_SVrefine2Falcon1Dovetail_11511:HG2_PB_SVrefine2PB10Xhap12_13548:HG2_PB_SVrefine2Falcon1plusDovetail_6902:HG2_Ill_SVrefine2DISCOVARplusDovetail_7511;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13548:HG2_PB_SVrefine2PBcRplusDovetail_6405;NumExactMatchSVs=2;ClusterMaxShiftDist=0.245353;ClusterMaxSizeDiff=0.245353;ClusterMaxEditDist=0.29927;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=119;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=20:23248629-23248694;PctSeqSimilarity=0.9831;PctSizeSimilarity=0.9917;PctRecOverlap=0.7686;SizeDiff=-1;StartDistance=-27;EndDistance=-27;GTMatch=1;TruScore=91;MatchId=3156.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:1:19:1:39:./.:0:10:1:2:./.:0:6:./.:.:.:.:.:.
chr20	23295291	HG4_PB_SVrefine2Falcon1Dovetail_11537	T	TCAGTCTTCTTCCCACAGGCTGCACCATACTTCCACCTATCATGGAGGTCTCAGGCTCCAAGAGAGTGAGAATGGGAGTTCTCGAGACCAGAACTAGAATGTCATTCCTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6903:HG3_PB_SVrefine2Falcon1Dovetail_11512:HG3_PB_HySA_27724:HG2_PB_pbsv_18546:HG2_PB_HySA_33582:HG3_Ill_250bpfermikitraw_23505:HG2_Ill_GATKHCSBGrefine_12094:HG3_PB_pbsv_18237:HG4_PB_SVrefine2Falcon1Dovetail_11537:HG3_PB_SVrefine2PBcRDovetail_9069:HG3_Ill_SVrefine2DISCOVARDovetail_13081;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6903:HG4_PB_SVrefine2Falcon1Dovetail_11537:HG3_PB_SVrefine2PBcRDovetail_9069:HG3_Ill_SVrefine2DISCOVARDovetail_13081;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.218341;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=109;DistBack=-109;DistForward=35;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=115;REFWIDENED=20:23295292-23295406;PctSeqSimilarity=0.9957;PctSizeSimilarity=1;PctRecOverlap=0.9358;SizeDiff=0;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=97;MatchId=3157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:28:0|1:22:0:0:27:./.:1:9:3:0:0/1:22:15:./.:.:.:.:.:.
chr20	23923282	HG3_Ill_MetaSV_3014	C	CCATTATAACCATAACTGTCACCATTATCATAATCATCATCACCACCATCACTACAACAATCACCATTATCATCACCACCATCTTCACCACCATCACAATCATTATCCTTATCAACATCACCATTATCAT	20	PASS	ClusterIDs=HG3_PB_pbsv_18241:HG4_PB_assemblyticsfalcon_15155:HG2_PB_HySA_33591:HG2_PB_pbsv_18551:HG3_PB_assemblyticsfalcon_15395:HG4_PB_pbsv_18472:HG4_PB_SVrefine2PBcRDovetail_9322:HG2_PB_PB10Xdip_18156:HG2_PB_assemblyticsfalcon_15412:HG2_PB_SVrefine2Falcon2Bionano_9130:HG4_Ill_SVrefine2DISCOVARDovetail_12901:HG4_Ill_GATKHCSBGrefine_12507:HG4_PB_SVrefine2Falcon1Dovetail_11539:HG4_Ill_manta_4173:HG4_Ill_MetaSV_2965:HG3_PB_SVrefine2Falcon1Dovetail_11515:HG2_Ill_manta_4912:HG2_PB_HySA_33590:HG3_PB_SVrefine2PBcRDovetail_9071:HG3_Ill_manta_4011:HG3_Ill_Spiral_18705:HG3_Ill_SVrefine2DISCOVARDovetail_13083:HG3_Ill_MetaSV_3014:HG3_Ill_GATKHCSBGrefine_11960:HG2_PB_SVrefine2PBcRplusDovetail_6407:HG2_PB_SVrefine2PB10Xhap12_13550:HG2_PB_SVrefine2Falcon1plusDovetail_6906:HG2_Ill_SVrefine2DISCOVARplusDovetail_7515:HG2_Ill_MetaSV_2869:HG2_Ill_GATKHCSBGrefine_12098:HG2_10X_SVrefine210Xhap12_12951;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12951:HG2_Ill_GATKHCSBGrefine_12098:HG2_Ill_MetaSV_2869:HG2_Ill_SVrefine2DISCOVARplusDovetail_7515:HG2_PB_SVrefine2Falcon1plusDovetail_6906:HG2_PB_SVrefine2PB10Xhap12_13550:HG2_PB_SVrefine2PBcRplusDovetail_6407:HG3_Ill_GATKHCSBGrefine_11960:HG3_Ill_MetaSV_3014:HG3_Ill_SVrefine2DISCOVARDovetail_13083:HG3_Ill_Spiral_18705:HG3_Ill_manta_4011:HG3_PB_SVrefine2PBcRDovetail_9071;NumExactMatchSVs=13;ClusterMaxShiftDist=0.246575;ClusterMaxSizeDiff=0.246575;ClusterMaxEditDist=0.316547;PBcalls=17;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=129;DistBack=94341;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=20:23923283-23923284;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3158.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:64:./.:0:0:0:0:./.:0:0:0:0:1/1:0:22:./.:.:.:.:.:.
chr20	24510661	HG2_PB_SVrefine2Falcon2Bionano_9132	G	GTGGTGATGGTGGTAATACCCCTGGTGATGGTTTCAGTGGTGGAGATGATGACAGTGATGGTGGTGGTGATGGTAGTACTCCCGGTGGTGGTGTCAGTGGTGGGGATGGTGATGGTGGTGGTGATGGTGTCAGTGGTGGGGATGGTGATGGTGGTGGTGATGGTGTCAGTGGTGGGGATGGTGATGGTGGTGGTGATGGTGATGGTAGTATTCCCGGTGATGGTGTCAGTGGTGGGGATGGTGATGGTGGTGGTGATGGTAGTATTCCCGGTGATGGTGTCAGTGGTGGGGATGGTGATGGTGGTGGTGACAGTAGTACTCCCAGTGATGGTGTCATGGTGGAGATGGTGATGGTGGTGGTGATGGTAGTACTCCCGGTGATGGTGTCAGTGGTGGGGATGGTGATGGTGGTGGTGATGGTAGTACTCCCGGTGATGGTGTCAGTGGTGGGGATGGTGATGGTGGTGGTGACGGTAGTACTCCTGGTGATGGTGTCAGTGGTGGGGATGGTGATGGTGGTGGTGATGGTAGTATTCCCAGTGATGGTGTCAGTGGTGGGGATGGTGATGGTGGTGGTGATGGTGTCAGTGGTGGGGATGGTGATGGTGGTATTCCCAGTGATAGTGTCAGTGGTGGGGATGGTGATGGTGGTGGCGATGGTGGTATTCCTGGTGATGGTGTCAGTGGTGGGGAGAGTGGTGGTGATGATGGTAGTACCCCTGGTGGTGGTGATTATGAAAATGGCTATGTCAGTGATGCTGATTGTGATGGTGACTGAAGTTCTGGAGGTGATGGGGTAATGAAGGTAGTGATGGCTATGGTGGTGATGGTGGAGATAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9132:HG4_PB_pbsv_18477:HG4_PB_HySA_26806:HG2_PB_PB10Xdip_18160:HG2_Ill_breakscan11_4886:HG2_PB_HySA_33595:HG4_PB_HySA_26805:HG3_PB_pbsv_18246:HG3_PB_assemblyticsfalcon_15402:HG2_PB_pbsv_18554:HG2_PB_assemblyticsfalcon_15418:HG4_PB_assemblyticsfalcon_15160:HG2_PB_HySA_33594:HG4_PB_SVrefine2Falcon1Dovetail_11542:HG3_PB_SVrefine2Falcon1Dovetail_11519:HG2_PB_SVrefine2Falcon1plusDovetail_6910:HG4_PB_SVrefine2PBcRDovetail_9325:HG3_PB_SVrefine2PBcRDovetail_9075:HG2_PB_SVrefine2PBcRplusDovetail_6412:HG2_PB_SVrefine2PB10Xhap12_13554;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9132:HG2_PB_SVrefine2PBcRplusDovetail_6412:HG2_PB_SVrefine2PB10Xhap12_13554;NumExactMatchSVs=3;ClusterMaxShiftDist=0.179487;ClusterMaxSizeDiff=0.179487;ClusterMaxEditDist=0.267481;PBcalls=19;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=838;DistBack=660;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=20:24510662-24510677;PctSeqSimilarity=0.9988;PctSizeSimilarity=1;PctRecOverlap=0.9833;SizeDiff=0;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=99;MatchId=3159.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:103:./.:0:5:2:6:1/1:6:130:6:153:1/1:0:28:1/1:4:144:.:932:.
chr20	24937726	HG2_PB_SVrefine2PB10Xhap12_13560	T	GAGGAGGGGGCAGGTGAGGGAGAACAGGTGGGGGGCAGGTGAGGGGGCAGGTAAGAGAGAACATGTTAGGGAGTACAGGTGGGTGGACAGGCGATGGGGGCAGGTGAGGAGGGACAGGTGAAGGGGGGAAGGTGACAGGGGGCAGGTGGGGGGGCAGGTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11524:HG2_PB_SVrefine2PBcRplusDovetail_6417:HG2_PB_SVrefine2PB10Xhap12_13560:HG2_PB_SVrefine2Falcon2Bionano_9137:HG3_PB_SVrefine2PBcRDovetail_9080:HG3_PB_pbsv_18252:HG2_PB_PB10Xdip_18167:HG3_PB_HySA_27736:HG4_PB_HySA_26815:HG2_PB_pbsv_18562:HG4_PB_SVrefine2Falcon1Dovetail_11547:HG4_PB_SVrefine2PBcRDovetail_9330:HG2_PB_SVrefine2Falcon1plusDovetail_6914;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9137:HG2_PB_SVrefine2PB10Xhap12_13560:HG2_PB_SVrefine2PBcRplusDovetail_6417;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0980392;ClusterMaxSizeDiff=0.0915033;ClusterMaxEditDist=0.260586;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=159;DistBack=-1;DistForward=22;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=20:24937727-24937725;PctSeqSimilarity=0.9883;PctSizeSimilarity=0.9937;PctRecOverlap=0.9245;SizeDiff=1;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=96;MatchId=3160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:67:1/1:3:33:3:24:./.:3:23:5:35:./.:0:3:./.:.:.:.:.:.
chr20	25047746	HG2_PB_SVrefine2PB10Xhap12_13561	C	CACACCACACACACACACCACACACACACACCACACACACACAGACACACACACAGACAGACACACACCACACACACACACCACACACACACAGACACACACCACACACACGCACACACCAAACACACACACCACACACACAGACACACCATATATACACCAGACACACGCACACACCACACATACACCACACACAGACACAGCACACACATGCACACCACACACACACGCACACACCACACAGACACACACCACATACACGCACACACCAAACACACCACACAAACGCACACACCACACACACCACACACACGTGCGCACAGACACCACACACGCACACACCACACGCCACACCACATAGACATCACACACATCACACACATGCACGCACACACATCACACAACCACACACATGCACACACCACACACACCACATGCATAG	20	PASS	ClusterIDs=HG3_PB_pbsv_18254:HG2_PB_SVrefine2Falcon2Bionano_9138:HG2_PB_PB10Xdip_18168:HG2_PB_HySA_33607:HG3_PB_HySA_27737:HG4_Ill_MetaSV_2967:HG2_Ill_GATKHCSBGrefine_12103:HG3_Ill_MetaSV_3018:HG3_Ill_GATKHCSBGrefine_11964:HG2_Ill_MetaSV_2871:HG4_Ill_GATKHCSBGrefine_12514:HG4_PB_HySA_26817:HG2_PB_HySA_33606:HG2_PB_HySA_33605:HG2_PB_SVrefine2Falcon1plusDovetail_6915:HG2_Ill_SVrefine2DISCOVARplusDovetail_7519:HG3_PB_SVrefine2PBcRDovetail_9081:HG3_PB_SVrefine2Falcon1Dovetail_11525:HG2_PB_SVrefine2PBcRplusDovetail_6418:HG2_PB_SVrefine2PB10Xhap12_13561:HG4_PB_SVrefine2PBcRDovetail_9331:HG4_Ill_SVrefine2DISCOVARDovetail_12908:HG2_PB_pbsv_18564:HG4_PB_SVrefine2Falcon1Dovetail_11548:HG4_PB_pbsv_18486;NumClusterSVs=25;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13561:HG2_PB_SVrefine2PBcRplusDovetail_6418:HG3_PB_SVrefine2Falcon1Dovetail_11525:HG3_PB_SVrefine2PBcRDovetail_9081;NumExactMatchSVs=4;ClusterMaxShiftDist=0.227488;ClusterMaxSizeDiff=0.211765;ClusterMaxEditDist=0.318021;PBcalls=17;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=441;DistBack=3;DistForward=7;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=720;REFWIDENED=20:25047747-25048466;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9955;PctRecOverlap=0.9501;SizeDiff=2;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=97;MatchId=3161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:77:1/1:1:35:2:21:./.:25:406:33:447:./.:0:2:1/1:1:92:.:.:.
chr20	25582239	HG3_Ill_GATKHCSBGrefine_11965	T	TACACACAATCCCACTCTACAGACACCCCACTCAGCACACATACCCACCACTCACACACTCCCCACTTCTTACAAATACATGTTACTAAAAACATACTACTATACACCCCTACACACATACAACCCACTACTACATACTCCACCACTCACACATAATTCCACTAAATGCCTGCCACTACATACACCACTCTCTACTCACGGCACTCGTTAATCACACACACCCCACTAATAAGCACCCACTGTACACACTTCACACATATACTGCATCACTCAACACACAGACTACTCACACACACACAGTCCCACACAACCACAGTCCCACAGACGTTCATACAACTCTACTACACACGGCTGTGCTATACAAACACAGCATGATACACATACACCCACTCAATGCTACTAAACATGCCACCACATACACACCCCCCACTACCCACATACACACATGCACACACCTGCACTCCCCACACACACACCTGCACTCTAAACCTGCCACTCACACTCCACACACAGGGCCTCCCGATGTACATATATATGCGCCACTTCTACATACGTGCACACAACCATGTCACACACACACCTCTCCACCCTTCTAAATACACGCACACAACCATCTCACACATCTCTCCACACCTACATACACACACAACTATCTCACACACACACCTCTCCATGCACCTACATACACGCACACAGCCATCTCACACACACCTCTCCACACACCTATATGCACACGATCTCTCCATCTCACACACACCTCTCCACACACCTACATACATGCACACAACCATCTCACACATACACCTCTCCACACACCTACATACACACACACAACCATCTCACACACGCTTCTCCACACACCTATACACATGATCTC	20	PASS	ClusterIDs=HG4_PB_pbsv_18490:HG3_PB_HySA_27747:HG2_PB_pbsv_18567:HG4_PB_assemblyticsfalcon_15176:HG3_PB_assemblyticsfalcon_15418:HG2_PB_assemblyticsfalcon_15432:HG2_PB_HySA_33614:HG4_PB_HySA_26821:HG4_Ill_SVrefine2DISCOVARDovetail_12911:HG4_Ill_GATKHCSBGrefine_12516:HG3_Ill_GATKHCSBGrefine_11965:HG2_PB_SVrefine2PBcRplusDovetail_6421:HG2_PB_SVrefine2PB10Xhap12_13564:HG2_PB_SVrefine2Falcon2Bionano_9141:HG4_Ill_MetaSV_2968:HG4_PB_SVrefine2Falcon1Dovetail_11550:HG3_PB_SVrefine2PBcRDovetail_9085:HG3_PB_SVrefine2Falcon1Dovetail_11528:HG2_PB_SVrefine2Falcon1plusDovetail_6918:HG4_PB_SVrefine2PBcRDovetail_9333:HG2_PB_PB10Xdip_18177:HG3_PB_pbsv_18257;NumClusterSVs=22;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9141:HG2_PB_SVrefine2PB10Xhap12_13564:HG2_PB_SVrefine2PBcRplusDovetail_6421:HG3_Ill_GATKHCSBGrefine_11965:HG4_Ill_GATKHCSBGrefine_12516:HG4_Ill_SVrefine2DISCOVARDovetail_12911;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0593505;ClusterMaxSizeDiff=0.0593505;ClusterMaxEditDist=0.234392;PBcalls=18;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=876;DistBack=41;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=20:25582240-25582246;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:70:1/1:3:24:3:24:1/1:7:223:3:254:1/1:0:11:1/1:7:136:.:936:.
chr20	30250848	HG4_Ill_GATKHC_29088	T	TATATATATATATACACACACATATATATACATATATACATATATATACACACACATATACACACACACACACACACAC	20	PASS	ClusterIDs=HG2_Ill_GATKHC_29125:HG2_PB_pbsv_18580:HG2_PB_HySA_33636:HG4_Ill_GATKHC_29088:HG4_Ill_GATKHCSBGrefine_12526:HG2_Ill_manta_4915;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHC_29125:HG4_Ill_GATKHC_29088:HG4_Ill_GATKHCSBGrefine_12526:HG2_Ill_manta_4915;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0375;ClusterMaxSizeDiff=0.025;ClusterMaxEditDist=0.173913;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=78;DistBack=3501;DistForward=35;DistMin=35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=157;REFWIDENED=20:30250849-30251005;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:0|1:26:8:1:19:0|1:21:0:1:23:0/1:28:6:./.:.:.:.:.:.
chr20	30277044	HG2_PB_SVrefine2PB10Xhap12_13580	A	AAGGGGAAGGGAAAGGGAGGGAAGGGGAGGGGAAGGGTAGGGGAGGCGAGGGGAAGAGGAGAGGAGGGGAAGGGGAGGGGAGGGGAAGGGAAGGGTAGGGGAGGGGAAGGGTAGGGGAGGGGAAGGGAAGGGGAGGGGAGGGGAAGGGAAGGGGAAGGGGACAGGGAGGGGCGGGGAGTGGAGAGGGAGGGGAGGGGAGAGGGAGGGGAGGGGAGGGAAGAGGGAGGGGAGGGGAGGGAAGAGGGAGGGGAGAGGGAGGGGAGGGAAGAGGGAAGGGAGGGGAGGGGAGAGGGAGGGGAGGAGAGGGGAGGGGAGGAGAGGGGAGAGGGAGGGGAGGGGAGAGGGAGGGGAGGGG	10	PASS	ClusterIDs=HG2_PB_pbsv_18581:HG2_PB_PB10Xdip_18275:HG2_PB_HySA_33638:HG3_PB_pbsv_18272:HG2_PB_SVrefine2Falcon1plusDovetail_6926:HG4_PB_SVrefine2PBcRDovetail_9339:HG2_PB_SVrefine2Falcon2Bionano_9148:HG2_PB_SVrefine2PBcRplusDovetail_6427:HG2_PB_SVrefine2PB10Xhap12_13580:HG4_PB_SVrefine2Falcon1Dovetail_11557:HG3_PB_SVrefine2Falcon1Dovetail_11531:HG3_PB_SVrefine2PBcRDovetail_9088:HG4_PB_pbsv_18505;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13580:HG2_PB_SVrefine2PBcRplusDovetail_6427;NumExactMatchSVs=2;ClusterMaxShiftDist=0.121563;ClusterMaxSizeDiff=0.121387;ClusterMaxEditDist=0.265162;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=354;DistBack=5444;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=51;REFWIDENED=20:30277045-30277095;PctSeqSimilarity=0.9948;PctSizeSimilarity=1;PctRecOverlap=0.9183;SizeDiff=0;StartDistance=-29;EndDistance=-29;GTMatch=1;TruScore=97;MatchId=3164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:1:24:1:16:./.:0:10:1:13:./.:0:5:0/1:2:8:.:.:.
chr20	30318207	HG4_Ill_SVrefine2DISCOVARDovetail_12916	C	CGGCTGGGCGCGGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCCACTAAAAATACAAAAAAAAAAAAAAATCAGCCAGGCATAGTGGCCTGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATTGTGCCATTGCACTCCAGCCTGGGCGACAAGAGCGAACTGTTTTAAAAAATAAAATAAAGAATATAATCCCTTGCTTTAACAGTCACTCCCATCCTGCCTCACCCCTACTGCCCAGCCCCTGGCAACCACTAGTCTACTTTCTATTTCCACACATTTACCTATTCAGAAATTTCATGTGAATTAAATAATACGTTATTCCTTTTTACTCTGGCTTCTCTAACGTAATGTTTCAGATTCACCTATGTTGTAGCATGTAAGAGTACTTCATTCCTTCTATTAAAGAATACTCCTTCACTGTATGAATATACCATATTTTATTTATCCATTCATCAGTTGGTGAAAATTTGGGTTGTTTCTTATAGTCTATATTTTTTTTAGATAGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCATAATCTCGGTTCACCACAACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTGCTGAGTAGCTGGGATTATAGGCATGTGCCACCATGCCCGTCTAATTTTCTATTTTTAGTAGAGACAGGGTTTCTCCACATTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCTGCTTTGGCCTCCCAAAATGCTGGTATTACAGGCATGAACCACTGCGTCTTGCCTTATATAATCTATTGTTTTTAATCAGTGTGCTAAGGTCTTTGTAATCCTTTCCCTAACATGAATCCCACATCAGCCATGAAGGAAGAGACCAAGAAACACTCAGAACTCCCTTTACTTGTGTAAGGAAGTTTAGACTTCTCCTCTGGAGGTTTGATATGAAGAGTCTGTTGCAATGAACTGGTAATAGACAGATTAATAGAAAAGGCATACTAATTTGTTAATGTGAACATGTGCAGGAGAGCCACACAAACTATGAGACTCAAGGGCCGGATGGTTGAAGTTTAAATACCCGCTTCATAGCAGAGAGGGAAGTGGGGGTGTAGGCAATTTTAGAGGAAGAGTAAATTATATTTGGTAGTAATTAATAAGCCTGAAGAACAGACGATAGCCCGGGAAAAAGTTCCTCTGGGCTGTGGGCAGGTGGCAACAAGTTATGGGAAAGTGAGGGGCAGAACTGCACTGCAAACAAAGGTTGTCTTATTATGCAGATAAAGTCTCCCAGGTTGAAAAAAAAGTTTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13581:HG2_PB_PB10Xdip_18276:HG2_PB_HySA_33639:HG4_PB_SVrefine2Falcon1Dovetail_11558:HG4_PB_SVrefine2PBcRDovetail_9340:HG4_Ill_SVrefine2DISCOVARDovetail_12916:HG2_PB_SVrefine2Falcon1plusDovetail_6927:HG2_PB_SVrefine2Falcon2Bionano_9149;NumClusterSVs=8;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_12916:HG4_PB_SVrefine2PBcRDovetail_9340;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0212766;ClusterMaxSizeDiff=0.0212766;ClusterMaxEditDist=0.0276989;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=1424;DistBack=3945;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=270;REFWIDENED=20:30318208-30318477;PctSeqSimilarity=0.9983;PctSizeSimilarity=1;PctRecOverlap=0.9656;SizeDiff=0;StartDistance=-49;EndDistance=-49;GTMatch=0;TruScore=98;MatchId=3165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:22:0|1:32:2:1:14:0|1:35:0:0:10:0/1:19:11:0/1:50:120:.:1612:.
chr20	31150682	HG2_PB_SVrefine2PB10Xhap12_13585	A	AGGAGGGCAGGGAGGGTGGAGGGGAGGGAGAGTAGAGGGGAGAGAGAGTGGAGAAGGAGGGTGGAGGGGAGGGAGGGTGGGGAGGGAGAGTGGAGGGGTGGAGAGTGGAGGGCAGAGAGTGGAGGGGAGGGACAGTGGAGGGGAAGGAGGGTAGAGGGAGGGAGAGTGGAAGGAGGGAGAGTGGAGGGGAAGGAGGGTGAAGGGGAAGGAGGGTGGAGGGAGGGTGGAGGCAGGGAGAGTGGAGGGCAGGGAGGCTGGAGGGAGGGAGAGTGGAGTGCAGGGAGGGTGGAGGGAGGGAGAGTGGGGAGGGAGGGTAGAAGGTAAGGAGGGTGGAGGGGAGGGAGGGAGAGTGGAAGGCAGGGAGGGTGGAGGGAGGGAGGGTGGGGAGGGAGGATGGAGGACAGGGAGGGTGGGGAGGGAGGGTGGAGGGAGAGTGGGGAGGGCAGGGAGGGTGGAGGGGGGAAGTGGGGAGGGAGGGTGGAGGGCAGGGAGGATGGAGGGAGGGAGAGTGGGGAAGGTGGAGGGGAGGGAGGGAGGAAGGCGGGGGGGAGGGAGGGAGAGTGGGGAGGGTGGAGGGGAGGGAGGGTGGAGGGAGGGAGAGTGGGGAGGGTGGAGGGCAGGGAGGAGGGAGGAGGGGAGGGAGGGAGAGTGGGGAGGGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11562:HG2_PB_HySA_33656:HG2_PB_pbsv_18585:HG3_PB_pbsv_18277:HG2_PB_PB10Xdip_18282:HG2_Ill_breakscan11_4888:HG3_PB_SVrefine2Falcon1Dovetail_11536:HG2_PB_SVrefine2PBcRplusDovetail_6431:HG2_PB_SVrefine2PB10Xhap12_13585:HG2_PB_SVrefine2Falcon1plusDovetail_6931:HG2_PB_SVrefine2Falcon2Bionano_9153:HG3_PB_SVrefine2PBcRDovetail_9092;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13585:HG2_PB_SVrefine2PBcRplusDovetail_6431;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0616333;ClusterMaxSizeDiff=0.0431433;ClusterMaxEditDist=0.27735;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=658;DistBack=74035;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=427;REFWIDENED=20:31150683-31151109;PctSeqSimilarity=0.9673;PctSizeSimilarity=0.9909;PctRecOverlap=0.5296;SizeDiff=6;StartDistance=-307;EndDistance=-307;GTMatch=0;TruScore=82;MatchId=3166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:2:21:0:16:./.:0:2:0:8:./.:0:0:0/1:3:17:.:.:.
chr20	31735170	HG2_PB_SVrefine2Falcon2Bionano_9158	T	TGGAAGGAGGGGAGAAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAAGGAAGGAAGGAGGGAGGGAGGGAGGGAAAGAGGGAGGGAGGGAAGGAGGAAAGGAAGGAAGGAGGGAGGGAGGGAGGGAGGGAAAGAAGGAAGGAAGGAAGGAAGGAGGGAGGGAGGGAGGGAAAGAGGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAGGGAAGGAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9094:HG3_PB_HySA_27787:HG3_PB_HySA_27786:HG3_PB_pbsv_18280:HG4_PB_pbsv_18519:HG2_PB_PB10Xdip_18291:HG2_PB_HySA_33664:HG4_Ill_MetaSV_2981:HG3_Ill_MetaSV_3030:HG3_Ill_SVrefine2DISCOVARDovetail_13102:HG4_PB_SVrefine2Falcon1Dovetail_11565:HG4_PB_SVrefine2PBcRDovetail_9348:HG3_PB_SVrefine2Falcon1Dovetail_11539:HG4_PB_HySA_26858:HG2_PB_SVrefine2PBcRplusDovetail_6437:HG2_PB_SVrefine2PB10Xhap12_13592:HG2_PB_SVrefine2Falcon2Bionano_9158:HG2_PB_SVrefine2Falcon1plusDovetail_6937;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9158:HG2_PB_SVrefine2PB10Xhap12_13592:HG2_PB_SVrefine2PBcRplusDovetail_6437:HG3_PB_SVrefine2Falcon1Dovetail_11539;NumExactMatchSVs=4;ClusterMaxShiftDist=0.25974;ClusterMaxSizeDiff=0.25974;ClusterMaxEditDist=0.280088;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=252;DistBack=12;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=91;REFWIDENED=20:31735171-31735261;PctSeqSimilarity=0.986;PctSizeSimilarity=0.9882;PctRecOverlap=0.8745;SizeDiff=-3;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=94;MatchId=3167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:./.:0:3:0:1:./.:0:2:0:8:./.:0:4:./.:.:.:.:.:.
chr20	32546204	HG2_PB_pbsv_18596	T	TGCCGGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCTGTGAACCCGCGGAAGCGGAGCTGCAGTGAGCCGAGATTGCGCCACTGCACAGTCCGCAGTCCGGCCTGGGGCGACAGATGCGAGACTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6940:HG2_PB_pbsv_18596:HG4_PB_HySA_26861:HG2_PB_HySA_33667:HG4_PB_pbsv_18525:HG2_PB_SVrefine2PB10Xhap12_13595:HG2_PB_SVrefine2PB10Xhap12_13596:HG2_PB_PB10Xdip_18292:HG2_PB_SVrefine2PBcRplusDovetail_6440:HG2_PB_SVrefine2Falcon2Bionano_9161;NumClusterSVs=10;ExactMatchIDs=HG2_PB_pbsv_18596;NumExactMatchSVs=1;ClusterMaxShiftDist=0.247788;ClusterMaxSizeDiff=0.235294;ClusterMaxEditDist=0.282353;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=188;DistBack=-173;DistForward=-1;DistMin=-173;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=20:32546205-32546204;PctSeqSimilarity=0.9572;PctSizeSimilarity=0.9947;PctRecOverlap=0.9524;SizeDiff=-1;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=96;MatchId=3168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:29:1|0:4:29:16:0:0|1:17:0:0:10:0/1:20:5:./.:.:.:.:.:.
chr20	33628861	HG2_Ill_Krunchall_24596	C	CAGGAAGAAAGGCCTCAACCAGGAACCAATCCTGACAGCACCTTGATCTTGGACTTCTAGCCTCCAGAACTGTGAGAAAAATAAATGTCTGTTAGTT	20	PASS	ClusterIDs=HG4_PB_HySA_26869:HG4_PB_pbsv_18533:HG2_PB_HySA_33689:HG2_PB_pbsv_18604:HG2_PB_SVrefine2PBcRplusDovetail_6445:HG3_PB_pbsv_18290:HG4_PB_SVrefine2Falcon1Dovetail_11573:HG4_Ill_Krunchall_24901:HG4_Ill_GATKHC_29120:HG4_Ill_GATKHCSBGrefine_12541:HG4_Ill_250bpfermikitraw_23865:HG3_PB_SVrefine2Falcon1Dovetail_11548:HG3_PB_HySA_27797:HG3_Ill_SVrefine2DISCOVARDovetail_13117:HG3_Ill_GATKHCSBGrefine_11992:HG3_Ill_250bpfermikitraw_23561:HG2_PB_SVrefine2Falcon2Bionano_9167:HG2_Ill_SVrefine2DISCOVARplusDovetail_7552:HG2_Ill_Krunchall_24596:HG2_Ill_GATKHCSBGrefine_12133:HG2_Ill_250bpfermikitraw_24253:HG2_10X_SVrefine210Xhap12_12992;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12992:HG2_Ill_250bpfermikitraw_24253:HG2_Ill_GATKHCSBGrefine_12133:HG2_Ill_Krunchall_24596:HG2_Ill_SVrefine2DISCOVARplusDovetail_7552:HG2_PB_SVrefine2Falcon2Bionano_9167:HG3_Ill_250bpfermikitraw_23561:HG3_Ill_GATKHCSBGrefine_11992:HG3_Ill_SVrefine2DISCOVARDovetail_13117:HG3_PB_HySA_27797:HG3_PB_SVrefine2Falcon1Dovetail_11548:HG4_Ill_250bpfermikitraw_23865:HG4_Ill_GATKHCSBGrefine_12541:HG4_Ill_GATKHC_29120:HG4_Ill_Krunchall_24901:HG4_PB_SVrefine2Falcon1Dovetail_11573;NumExactMatchSVs=16;ClusterMaxShiftDist=0.103627;ClusterMaxSizeDiff=0.0824742;ClusterMaxEditDist=0.212121;PBcalls=10;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=96;DistBack=6906;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=97;REFWIDENED=20:33628862-33628958;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:23:1:3:27:./.:3:30:3:0:0/1:15:18:./.:.:.:.:.:.
chr20	33814524	HG2_Ill_150bpfermikitraw_22841	G	GCGTGTCCGCGGCGCCGTGACTCGGCGGCTCCGCAGCGGCTGCAGCGGGAGGACCCGGCCGGAGCCGCCGCCGCCGCCGCCATCGCAGCCGGGCGGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7554:HG2_PB_SVrefine2Falcon1plusDovetail_6949:HG4_PB_assemblyticsfalcon_15221:HG4_PB_SVrefine2Falcon1Dovetail_11577:HG4_Ill_Krunchall_24903:HG4_Ill_GATKHCSBGrefine_12543:HG4_Ill_Cortex_2092:HG3_PB_SVrefine2Falcon1Dovetail_11552:HG3_Ill_manta_4017:HG3_Ill_Spiral_18744:HG3_Ill_Krunchall_24144:HG3_Ill_GATKHCSBGrefine_11994:HG3_Ill_Cortex_2128:HG3_Ill_250bpfermikitraw_23564:HG3_Ill_150bpfermikitraw_22876:HG2_Ill_manta_4921:HG2_Ill_SpiralSDKrefine_9806:HG2_Ill_Krunchall_24598:HG2_Ill_GATKHC_29161:HG2_Ill_GATKHCSBGrefine_12135:HG2_Ill_Cortex_4907:HG2_Ill_250bpfermikitraw_24254:HG2_Ill_150bpfermikitraw_22841:HG2_PB_PB10Xdip_18300:HG2_Ill_breakscan11_4889:HG4_PB_HySA_26875:HG3_PB_pbsv_18294:HG4_PB_pbsv_18537:HG2_PB_pbsv_18608:HG3_PB_SVrefine2PBcRDovetail_9104:HG3_Ill_SVrefine2DISCOVARDovetail_13121:HG2_PB_SVrefine2PBcRplusDovetail_6449:HG2_PB_SVrefine2PB10Xhap12_13605:HG2_PB_SVrefine2Falcon2Bionano_9171;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22841:HG2_Ill_250bpfermikitraw_24254:HG2_Ill_Cortex_4907:HG2_Ill_GATKHCSBGrefine_12135:HG2_Ill_GATKHC_29161:HG2_Ill_Krunchall_24598:HG2_Ill_SpiralSDKrefine_9806:HG2_Ill_manta_4921:HG3_Ill_150bpfermikitraw_22876:HG3_Ill_250bpfermikitraw_23564:HG3_Ill_Cortex_2128:HG3_Ill_GATKHCSBGrefine_11994:HG3_Ill_Krunchall_24144:HG3_Ill_Spiral_18744:HG3_Ill_manta_4017:HG3_PB_SVrefine2Falcon1Dovetail_11552:HG4_Ill_Cortex_2092:HG4_Ill_GATKHCSBGrefine_12543:HG4_Ill_Krunchall_24903:HG4_PB_SVrefine2Falcon1Dovetail_11577;NumExactMatchSVs=20;ClusterMaxShiftDist=0.118812;ClusterMaxSizeDiff=0.118812;ClusterMaxEditDist=0.181818;PBcalls=13;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=96;DistBack=-2;DistForward=0;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=20:33814517-33814526;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:1/1:0:23:2:18:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr20	35024725	HG2_PB_SVrefine2Falcon2Bionano_9173	C	CACACACACACACACGCACACACACACACGCACGCACACACACGCACACACACACTACGGACACACACCACACACGTGCAACACACACCACAGACACACACATACACACACACCACACACACGCACACCACACACCACATACACACGCACACACACCACAGACACACACATGCACACACACCACACACACCACATAAACACACATACACACACCACACACACCACACACACGCACACCATACACACACACCACATACACACACGTGCACACACATGCACACACACACCACAGACACACCACATACACACACCACAGACACACACACGCATGCATACACACCACAGACACGAACACATACATGCACACGCCACACACACACCACACACATACCACACACACACCACACATACCACATACACACACCACACACACATACCACATACACACACACCACACACATACCACATACACACACACCACACACATACCACATACACCACACATACCACATACACCACACACATACCACATACACACACACACCACACATAACACATACACACACACCACACACATACCACATACACACCACACATACCACATACACACACCACACACACATACCACATACACACACACCACACACATACCACATACACACACACCACACACATACCACATACACCACACATACCACATACACCACACACATACCACATACACACACACACCACACATAACACATACACACACACCACACACATACCACATACACACACCACACATACCACATACACCACACACATACCACATACACACACACACCACACACATACCACATACACACACCACACATACCACATACACACACCACACACATACCACATACACACACACCACACACATACCACATACACACACACACCACACACATACCACATACACACACACACCACATACACACACAGGCGCAGGCGCACACACACACACCACAGACATACATACAAACACCACACACACACACACCACACATACAGGCACACGTGCACACACGCACTACACATACACACACACCAGACACACATGCATACAGACACATACACACACACACAGGTGTGCGCACACACACAGGCGCGCGCACACACACCACAGACACACACCACACACACATACACGCACATACACGCACACCACACACCACATGCACACACACACACCACATACACACACCACACACACACCACACACACATACACGCACACCACACACCACATGCACACACACACCACATACACGCACACACCACATACACACCCCACACATGCACCACACACACGCACACACACCACACACACCACATGCACACACACATACACCACACACGCACACACACATGCCACACACACATGAACACACAGGCGCGCACACACACCACACACACCACACACACACACTGGCATGTGCACACACACACCACAGACACATATCACATACACACACCACACACACAGACACACCACACACACGCGGACACCACACACACCACATACACACACCCAGGCACGCACACACATACCACAGACACACACACACACCACACACACACCACACACATACACGCACACCACACACACACTGCATACACACACACATCACATACACAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6951:HG2_PB_pbsv_18611:HG2_PB_HySA_33700:HG2_PB_HySA_33699:HG2_PB_PB10Xdip_18302:HG2_Ill_breakscan11_4890:HG3_PB_pbsv_18299:HG2_PB_pbsv_18610:HG4_PB_pbsv_18539:HG2_PB_SVrefine2PBcRplusDovetail_6451:HG4_PB_SVrefine2PBcRDovetail_9361:HG4_PB_pbsv_18540:HG3_PB_SVrefine2PBcRDovetail_9107:HG3_PB_pbsv_18300:HG3_PB_SVrefine2Falcon1Dovetail_11555:HG4_PB_SVrefine2Falcon1Dovetail_11579:HG2_PB_SVrefine2PB10Xhap12_13607:HG2_PB_SVrefine2Falcon2Bionano_9173;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9173:HG2_PB_SVrefine2PB10Xhap12_13607:HG2_PB_SVrefine2PBcRplusDovetail_6451;NumExactMatchSVs=3;ClusterMaxShiftDist=0.203317;ClusterMaxSizeDiff=0.200246;ClusterMaxEditDist=0.33027;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=1664;DistBack=15696;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=355;REFWIDENED=20:35024726-35025080;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9988;PctRecOverlap=0.9838;SizeDiff=2;StartDistance=-26;EndDistance=-26;GTMatch=0;TruScore=99;MatchId=3171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:97:./.:0:0:0:0:1/1:1:29:2:30:1/1:0:10:1/1:4:312:.:1787:.
chr20	35270526	HG2_Ill_SVrefine2DISCOVARplusDovetail_7562	A	AAGTCACTGCACTCCAGCCTGGGTGACAGAGGGAGACTCCCTCTCAAAAAAAAAAAAAAAAAAAAAAAAGTCTGCAAGAGGGATCTGAGCAGGCTTGAGAGCTGGTGTCACAGCAAGCCAAGGTGACACAGATACACTGTTATTGGTGTCACAGGGCCAAGTAAGAGTACTTGTCTCAGCCTCCTGAGTTGCTGAGATTACAGGCATGAGCCACCAGGCCCGATACTTTAAGAGGCCGAGCACTTAATCCCAGCACTTGAAGCGGCTGAGAAGGGTGGATTGCTTGAGTTTAGGAGTTCTAGACCAGCCTGGCCAGCATGGCAAAATCTAGTCTCTACAAAAGAAACCACAAAAATTAGCCGGCTGCGGTGGCGCACACCTGTAATCCCAGCTATTCGGGAGGCTGAGGTGGGAGGGCGGGAGGATTGCTTGAGCTTGGGAGATGGAGTTCACAGTGAGCCAAGATCATACCACAGTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13006:HG3_PB_pbsv_18302:HG4_PB_pbsv_18541:HG2_PB_pbsv_18612:HG3_Ill_MetaSV_3037:HG4_PB_HySA_26882:HG2_PB_HySA_33704:HG4_Ill_MetaSV_2991:HG3_PB_SVrefine2Falcon1Dovetail_11556:HG4_PB_SVrefine2PBcRDovetail_9362:HG4_PB_SVrefine2Falcon1Dovetail_11580:HG4_Ill_SVrefine2DISCOVARDovetail_12939:HG3_PB_SVrefine2PBcRDovetail_9109:HG3_Ill_SVrefine2DISCOVARDovetail_13132:HG2_PB_SVrefine2Falcon1plusDovetail_6952:HG2_Ill_SVrefine2DISCOVARplusDovetail_7562:HG2_PB_SVrefine2PBcRplusDovetail_6452:HG2_PB_SVrefine2Falcon2Bionano_9174;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7562:HG2_PB_SVrefine2Falcon1plusDovetail_6952:HG3_Ill_SVrefine2DISCOVARDovetail_13132:HG3_PB_SVrefine2PBcRDovetail_9109:HG4_Ill_SVrefine2DISCOVARDovetail_12939:HG4_PB_SVrefine2Falcon1Dovetail_11580:HG4_PB_SVrefine2PBcRDovetail_9362;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0700309;ClusterMaxSizeDiff=0.0350154;ClusterMaxEditDist=0.197154;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=477;DistBack=32903;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=20:35270527-35270594;PctSeqSimilarity=0.9895;PctSizeSimilarity=1;PctRecOverlap=0.9078;SizeDiff=0;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=96;MatchId=3172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:62:1/1:0:26:0:10:./.:0:0:0:3:./.:0:1:./.:4:44:.:.:.
chr20	36542806	HG3_Ill_GATKHCSBGrefine_12003	G	GTGTGGGGGGAGTGTGTGTATATATATATGTGTGTGTATGTAAGTATATGTGTATGTGTGTTTATGTGTATGTGGGTGTATCTGTGTATGTGTGTATATATGTGTGTAGGGGTGTAGGTGTGTGTACGTGTGTGGGGGGAGTATTTGGGTGTGTATGTGTGTGTATGTGGTGTGTATATGTGGGGGGAGTGGGTGTGTGTGCGTATGTGTGCGTATGTGTATGTACGTGTGTGCATGTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7567:HG3_PB_pbsv_18305:HG4_PB_pbsv_18544:HG2_PB_PB10Xdip_18303:HG2_Ill_breakscan11_4891:HG4_Ill_manta_4182:HG4_Ill_MetaSV_2993:HG4_Ill_GATKHCSBGrefine_12546:HG3_Ill_manta_4022:HG3_Ill_MetaSV_3039:HG3_Ill_GATKHCSBGrefine_12003:HG2_Ill_manta_4925:HG2_Ill_MetaSV_2891:HG2_Ill_GATKHCSBGrefine_12141:HG4_PB_HySA_26887:HG2_PB_HySA_33716:HG2_PB_SVrefine2Falcon1plusDovetail_6955:HG4_PB_SVrefine2Falcon1Dovetail_11582:HG3_PB_SVrefine2PBcRDovetail_9112:HG4_PB_SVrefine2PBcRDovetail_9364:HG4_Ill_SVrefine2DISCOVARDovetail_12943:HG3_PB_SVrefine2Falcon1Dovetail_11559:HG3_Ill_SVrefine2DISCOVARDovetail_13138:HG2_PB_SVrefine2PBcRplusDovetail_6455:HG2_PB_SVrefine2PB10Xhap12_13610:HG2_PB_SVrefine2Falcon2Bionano_9177;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12141:HG2_Ill_MetaSV_2891:HG2_Ill_manta_4925:HG3_Ill_GATKHCSBGrefine_12003:HG3_Ill_MetaSV_3039:HG3_Ill_manta_4022:HG4_Ill_GATKHCSBGrefine_12546:HG4_Ill_MetaSV_2993:HG4_Ill_manta_4182;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0650406;ClusterMaxSizeDiff=0.0650406;ClusterMaxEditDist=0.156;PBcalls=13;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=238;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=132;REFWIDENED=20:36542792-36542923;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:1:17:2:13:./.:21:359:11:197:1/1:0:22:./.:.:.:.:.:.
chr20	36744544	HG3_Ill_150bpfermikitraw_22903	G	GTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCTTTCCTTCCTTCCTTCCTTTCTTCC	20	PASS	ClusterIDs=HG4_Ill_Krunchall_24919:HG3_PB_pbsv_18306:HG3_PB_HySA_27817:HG2_PB_pbsv_18616:HG2_PB_HySA_33718:HG4_PB_HySA_26890:HG4_PB_assemblyticsfalcon_15242:HG2_Ill_breakscan11_4892:HG2_PB_PB10Xdip_18304:HG3_CG_vcfBeta_9903:HG2_CG_vcfBeta_10470:HG4_Ill_GATKHC_29145:HG4_Ill_GATKHCSBGrefine_12547:HG4_Ill_250bpfermikitraw_23887:HG4_CG_vcfBeta_11495:HG3_Ill_scalpel_17567:HG3_Ill_Krunchall_24171:HG3_Ill_GATKHC_29099:HG3_Ill_GATKHCSBGrefine_12004:HG3_Ill_250bpfermikitraw_23587:HG3_Ill_150bpfermikitraw_22903:HG2_PB_assemblyticsfalcon_15517:HG2_Ill_scalpel_17221:HG2_Ill_SpiralSDKrefine_9826:HG2_Ill_Krunchall_24614:HG2_Ill_GATKHC_29183:HG2_Ill_GATKHCSBGrefine_12142:HG2_Ill_FB_15581:HG2_Ill_250bpfermikitraw_24269:HG4_Ill_SVrefine2DISCOVARDovetail_12944;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24269:HG2_Ill_FB_15581:HG2_Ill_GATKHCSBGrefine_12142:HG2_Ill_GATKHC_29183:HG2_Ill_Krunchall_24614:HG2_Ill_SpiralSDKrefine_9826:HG2_Ill_scalpel_17221:HG2_PB_assemblyticsfalcon_15517:HG3_Ill_150bpfermikitraw_22903:HG3_Ill_250bpfermikitraw_23587:HG3_Ill_GATKHCSBGrefine_12004:HG3_Ill_GATKHC_29099:HG3_Ill_Krunchall_24171:HG3_Ill_scalpel_17567:HG4_CG_vcfBeta_11495:HG4_Ill_250bpfermikitraw_23887:HG4_Ill_GATKHCSBGrefine_12547:HG4_Ill_GATKHC_29145;NumExactMatchSVs=18;ClusterMaxShiftDist=0.338983;ClusterMaxSizeDiff=0.338983;ClusterMaxEditDist=0.338983;PBcalls=8;Illcalls=19;TenXcalls=0;CGcalls=3;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=1;HG2count=13;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=56;DistBack=-1;DistForward=23;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=77;REFWIDENED=20:36744545-36744621;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3175.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:2:22:1:13:./.:2:19:2:20:1/1:0:27:./.:.:.:.:.:.
chr20	36822988	HG2_PB_pbsv_18618	A	AGTCTCATCATCCATCCATCCATTACCATCATCCATCCATCAACCATCCTATCATCACCATCTATCCAATTCCAACCGCGGATCCATCAGTCATCCCACGCATCCATCCATCCATCATGCCCCCCCAACCAACCATCCAACCATCCCATCATCCATCATCCTATCCATCCATCCATCCTAACCAAACGATCATCCATCCAATCGTCCATCCATCCATCCGTCCGTCCATCCATCCATCCGTCCGTCCATCCCATCCGATTCATCCATCCAATCATCCAACCATCGCAACCATCCATCCATCGCATCCAACCTCACCATCCAACCATCCAAACACCATCCATCCCATAACCATCATCCACACATGCCACCATCCGTCCATTCCATCCATCCGTCCGTCTATCCGATCCATCCATCCTCATTCATCAACCATTCCATCCATCATCCATCCATTCCATCCATCCATCATCAAACTCATCCATCCATCGTCATCCATCCAATCCGTCCGTCTCCATCCCATCCGTGCCGTCCTCCATCCGTCTTCCATCATCCGTCCATCCATCCTCCATCCATCCACCCAACGCATCCAACCATTCCATCCATCCATCCAAACATCCATCACCCACATCAAACATCCATCCATCCATCCATCCGTCCAAACACCATCCATCCATCCGTCATCTATCCATCCATGCCAGCCATGCCGTCCGTCCGTCTGTCTGTCCGTTCCCGTCCGTCCATCCATCCATCATGCATGCCCATCCATGCCAACCATCCATCCATCATGCCATCCATCCATCCGAAACCATTCCCATCCATCCATCCAAACATCCATCCATCCTCCAACCAGCCATCCATCCATCCATCCATCCATCCATCCAACCATCATCCATCGCATACATCCATCCAACCATTGCATCCATCCTATCGATCCATCCATTCCATCCATCCATTCAATCTGGTCGCATCCATCCAATCCATCCATCCATCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6457:HG4_PB_pbsv_18548:HG3_PB_pbsv_18308:HG2_PB_pbsv_18618:HG2_PB_PB10Xdip_18306:HG4_PB_HySA_26891:HG4_PB_assemblyticsfalcon_15246:HG2_PB_assemblyticsfalcon_15521:HG2_PB_SVrefine2Falcon2Bionano_9179:HG4_PB_SVrefine2PBcRDovetail_9366:HG2_PB_SVrefine2Falcon1plusDovetail_6957:HG4_PB_SVrefine2Falcon1Dovetail_11584:HG3_PB_SVrefine2Falcon1Dovetail_11561:HG3_PB_SVrefine2PBcRDovetail_9114:HG2_PB_SVrefine2PB10Xhap12_13612;NumClusterSVs=15;ExactMatchIDs=HG2_PB_pbsv_18618;NumExactMatchSVs=1;ClusterMaxShiftDist=0.197544;ClusterMaxSizeDiff=0.197544;ClusterMaxEditDist=0.25523;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=987;DistBack=7;DistForward=58485;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=20:36822989-36822988;PctSeqSimilarity=0.9204;PctSizeSimilarity=0.9929;PctRecOverlap=0.9889;SizeDiff=7;StartDistance=8;EndDistance=8;GTMatch=1;TruScore=96;MatchId=3176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:0:28:2:19:./.:6:6:12:2:0/1:17:7:0/1:31:46:.:1344:.
chr20	36942527	HG2_Ill_GATKHCSBGrefine_12143	T	TGATGATGATGGTGATGGGATGATGATGGTGGTGATGGTAATGGTGGGGAA	20	PASS	ClusterIDs=HG2_PB_HySA_33720:HG3_PB_HySA_27819:HG4_PB_assemblyticsfalcon_15247:HG2_PB_pbsv_18619:HG4_Ill_GATKHC_29151:HG3_PB_pbsv_18309:HG4_Ill_GATKHCSBGrefine_12548:HG4_Ill_150bpfermikitraw_22991:HG3_Ill_svaba_22993:HG3_Ill_Spiral_18766:HG3_Ill_GATKHC_29106:HG3_Ill_GATKHCSBGrefine_12006:HG3_Ill_250bpfermikitraw_23592:HG3_Ill_150bpfermikitraw_22908:HG2_Ill_GATKHC_29189:HG2_Ill_GATKHCSBGrefine_12143:HG2_Ill_150bpfermikitraw_22860:HG2_PB_PB10Xdip_18307;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22860:HG2_Ill_GATKHCSBGrefine_12143:HG2_Ill_GATKHC_29189:HG3_Ill_150bpfermikitraw_22908:HG3_Ill_250bpfermikitraw_23592:HG3_Ill_GATKHCSBGrefine_12006:HG3_Ill_GATKHC_29106:HG3_Ill_Spiral_18766:HG3_Ill_svaba_22993:HG4_Ill_150bpfermikitraw_22991:HG4_Ill_GATKHCSBGrefine_12548:HG4_Ill_GATKHC_29151;NumExactMatchSVs=12;ClusterMaxShiftDist=0.215686;ClusterMaxSizeDiff=0.213592;ClusterMaxEditDist=0.296296;PBcalls=6;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=8;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=52506;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=10;REFWIDENED=20:36942526-36942538;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:44:1|0:5:37:19:3:./.:94:501:454:103:./.:11:1:./.:.:.:.:.:.
chr20	36949430	HG2_PB_SVrefine2PB10Xhap12_13613	G	GGTGGGTGGATGGATGAATGGATGGATGGATGGATAAGTGGGTGGATGGGTGGGTGGATGAATGAATGGGTGGGTGGGTAGATGGGTGGGTGGGTAGGTGGATGGGTGA	20	PASS	ClusterIDs=HG4_PB_HySA_26892:HG2_PB_assemblyticsfalcon_15523:HG2_PB_pbsv_18620:HG4_PB_SVrefine2Falcon1Dovetail_11585:HG4_PB_assemblyticsfalcon_15248:HG3_PB_pbsv_18310:HG2_PB_PB10Xdip_18308:HG3_PB_HySA_27820:HG2_PB_SVrefine2Falcon1plusDovetail_6958:HG4_PB_SVrefine2PBcRDovetail_9367:HG4_Ill_SVrefine2DISCOVARDovetail_12945:HG3_PB_SVrefine2PBcRDovetail_9115:HG3_PB_SVrefine2Falcon1Dovetail_11562:HG3_Ill_SVrefine2DISCOVARDovetail_13140:HG2_PB_SVrefine2PBcRplusDovetail_6458:HG2_PB_SVrefine2PB10Xhap12_13613:HG2_PB_SVrefine2Falcon2Bionano_9180:HG2_Ill_SVrefine2DISCOVARplusDovetail_7569:HG2_PB_HySA_33721;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7569:HG2_PB_SVrefine2Falcon2Bionano_9180:HG2_PB_SVrefine2PB10Xhap12_13613:HG2_PB_SVrefine2PBcRplusDovetail_6458:HG3_Ill_SVrefine2DISCOVARDovetail_13140:HG3_PB_SVrefine2Falcon1Dovetail_11562:HG3_PB_SVrefine2PBcRDovetail_9115:HG4_Ill_SVrefine2DISCOVARDovetail_12945:HG4_PB_SVrefine2PBcRDovetail_9367;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.263636;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=108;DistBack=9;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=324;REFWIDENED=20:36949226-36949549;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:43:1/1:5:22:1:18:1/1:2:61:7:127:./.:0:4:./.:.:.:.:.:.
chr20	37954728	HG2_Ill_Krunchall_24629	A	AGAGAGAATTAGTTAAGGGGCATGTGGCTATCTGGGTTTCCTGTAATTTGAAATCTATG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22870:HG3_PB_pbsv_18317:HG4_PB_HySA_26902:HG3_PB_HySA_27829:HG2_PB_pbsv_18629:HG2_PB_HySA_33731:HG2_PB_SVrefine2PB10Xhap12_13618:HG4_Ill_svaba_22728:HG4_Ill_SVrefine2DISCOVARDovetail_12948:HG4_Ill_Krunchall_24935:HG4_Ill_GATKHC_29168:HG4_Ill_GATKHCSBGrefine_12555:HG4_Ill_250bpfermikitraw_23904:HG4_Ill_150bpfermikitraw_23003:HG3_PB_SVrefine2Falcon1Dovetail_11568:HG3_Ill_svaba_23001:HG3_Ill_SVrefine2DISCOVARDovetail_13143:HG3_Ill_Krunchall_24183:HG3_Ill_GATKHC_29115:HG3_Ill_GATKHCSBGrefine_12011:HG3_Ill_250bpfermikitraw_23600:HG3_Ill_150bpfermikitraw_22919:HG2_PB_SVrefine2Falcon1plusDovetail_6964:HG2_Ill_svaba_22770:HG2_Ill_SVrefine2DISCOVARplusDovetail_7573:HG2_Ill_Krunchall_24629:HG2_Ill_GATKHC_29198:HG2_Ill_GATKHCSBGrefine_12148:HG2_Ill_250bpfermikitraw_24283;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22870:HG4_Ill_svaba_22728:HG4_Ill_SVrefine2DISCOVARDovetail_12948:HG4_Ill_Krunchall_24935:HG4_Ill_GATKHC_29168:HG4_Ill_GATKHCSBGrefine_12555:HG4_Ill_250bpfermikitraw_23904:HG4_Ill_150bpfermikitraw_23003:HG3_PB_SVrefine2Falcon1Dovetail_11568:HG3_Ill_svaba_23001:HG3_Ill_SVrefine2DISCOVARDovetail_13143:HG3_Ill_Krunchall_24183:HG3_Ill_GATKHC_29115:HG3_Ill_GATKHCSBGrefine_12011:HG3_Ill_250bpfermikitraw_23600:HG3_Ill_150bpfermikitraw_22919:HG2_PB_SVrefine2Falcon1plusDovetail_6964:HG2_Ill_svaba_22770:HG2_Ill_SVrefine2DISCOVARplusDovetail_7573:HG2_Ill_Krunchall_24629:HG2_Ill_GATKHC_29198:HG2_Ill_GATKHCSBGrefine_12148:HG2_Ill_250bpfermikitraw_24283;NumExactMatchSVs=23;ClusterMaxShiftDist=0.214286;ClusterMaxSizeDiff=0.214286;ClusterMaxEditDist=0.348624;PBcalls=8;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=58;DistBack=-58;DistForward=12655;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=20:37954729-37954788;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3179.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:37:0|1:45:5:0:31:./.:18:0:2:21:0/1:11:19:./.:.:.:.:.:.
chr20	38215702	HG2_Ill_250bpfermikitraw_24286	G	GTGTATATATATGTATATATATATATACATATATATGTGTATATATGTGTGTA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24286:HG2_PB_HySA_33733:HG4_Ill_scalpel_16839:HG4_Ill_Krunchall_24937:HG4_Ill_GATKHC_29170:HG4_Ill_GATKHCSBGrefine_12556:HG4_Ill_250bpfermikitraw_23907:HG4_Ill_150bpfermikitraw_23006:HG2_Ill_Krunchall_24631:HG2_Ill_GATKHC_29200:HG2_Ill_GATKHCSBGrefine_12149;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24286:HG4_Ill_scalpel_16839:HG4_Ill_Krunchall_24937:HG4_Ill_GATKHC_29170:HG4_Ill_GATKHCSBGrefine_12556:HG4_Ill_250bpfermikitraw_23907:HG4_Ill_150bpfermikitraw_23006:HG2_Ill_Krunchall_24631:HG2_Ill_GATKHC_29200:HG2_Ill_GATKHCSBGrefine_12149;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.0727273;PBcalls=1;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=5021;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=77;REFWIDENED=20:38215685-38215761;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:26:0|1:44:6:0:18:./.:22:0:3:28:0/1:29:25:./.:.:.:.:.:.
chr20	39187216	HG2_Ill_GATKHCSBGrefine_12151	G	GAGGGAGGGAGGGAGGGAAAGGAGAAAGGGAAGAAAGGAAGAAGAAAAGAAGGAATAGAGAAAGAAATAATGGAGGGAGGGAAGAAGGAACGAAGGAAGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	20	PASS	ClusterIDs=HG2_PB_HySA_33740:HG2_PB_pbsv_18632:HG2_Ill_SVrefine2DISCOVARplusDovetail_7576:HG4_PB_SVrefine2PBcRDovetail_9373:HG4_Ill_GATKHC_29176:HG2_Ill_GATKHC_29206:HG2_Ill_GATKHCSBGrefine_12151:HG2_PB_SVrefine2PB10Xhap12_13621:HG2_PB_PB10Xdip_18319:HG2_PB_SVrefine2PBcRplusDovetail_6464:HG2_PB_SVrefine2PB10Xhap12_13620:HG4_PB_pbsv_18561;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12151:HG2_Ill_GATKHC_29206:HG4_Ill_GATKHC_29176;NumExactMatchSVs=3;ClusterMaxShiftDist=0.297521;ClusterMaxSizeDiff=0.297521;ClusterMaxEditDist=0.315353;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=132;DistBack=30;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=220;REFWIDENED=20:39187106-39187325;PctSeqSimilarity=0.9852;PctSizeSimilarity=0.9706;PctRecOverlap=0.9708;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:0|1:23:2:2:26:./.:22:2:3:35:0/1:15:11:./.:.:.:.:.:.
chr20	39627091	HG2_PB_HySA_33745	T	TGCCGGGCGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGCTAAAACGCGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTGTTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6966:HG4_PB_pbsv_18563:HG2_PB_HySA_33745:HG2_PB_assemblyticsfalcon_15542:HG2_PB_pbsv_18634;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_33745;NumExactMatchSVs=1;ClusterMaxShiftDist=0.111975;ClusterMaxSizeDiff=0.111975;ClusterMaxEditDist=0.149533;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=317;DistBack=11;DistForward=2193;DistMin=11;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=20:39627092-39627091;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9875;PctRecOverlap=0.9564;SizeDiff=-4;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=97;MatchId=3182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:25:0|1:35:4:0:11:0|1:40:0:0:7:0/1:24:6:0/1:10:28:.:.:.
chr20	40323411	HG2_PB_SVrefine2Falcon2Bionano_9190	A	AATGTCAAATTGCGATAAATAGAACACCCCCACCCCCAGGATGCTACAAGAGAGAATAATGGAGGAAAATTGATACATTAGATTAGAATAAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11593:HG3_PB_HySA_27842:HG2_PB_HySA_33750:HG2_PB_assemblyticsfalcon_15548:HG3_PB_pbsv_18325:HG2_PB_SVrefine2Falcon1plusDovetail_6971:HG4_PB_pbsv_18566:HG2_PB_SVrefine2PB10Xhap12_13627:HG2_PB_PB10Xdip_18324:HG4_PB_HySA_26912:HG4_Ill_GATKHC_29185:HG2_PB_pbsv_18638:HG4_Ill_GATKHCSBGrefine_12562:HG4_Ill_250bpfermikitraw_23921:HG3_Ill_SVrefine2DISCOVARDovetail_13150:HG3_Ill_GATKHC_29126:HG3_Ill_GATKHCSBGrefine_12017:HG3_Ill_250bpfermikitraw_23611:HG2_PB_SVrefine2PBcRplusDovetail_6467:HG2_PB_SVrefine2PB10Xhap12_13626:HG2_PB_SVrefine2Falcon2Bionano_9190:HG2_Ill_SVrefine2DISCOVARplusDovetail_7580:HG2_Ill_GATKHC_29214:HG2_Ill_GATKHCSBGrefine_12156:HG2_Ill_250bpfermikitraw_24300:HG2_10X_SVrefine210Xhap12_13028;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13028:HG2_Ill_250bpfermikitraw_24300:HG2_Ill_GATKHCSBGrefine_12156:HG2_Ill_GATKHC_29214:HG2_Ill_SVrefine2DISCOVARplusDovetail_7580:HG2_PB_SVrefine2Falcon2Bionano_9190:HG2_PB_SVrefine2PB10Xhap12_13626:HG2_PB_SVrefine2PBcRplusDovetail_6467:HG3_Ill_250bpfermikitraw_23611:HG3_Ill_GATKHCSBGrefine_12017:HG3_Ill_GATKHC_29126:HG3_Ill_SVrefine2DISCOVARDovetail_13150;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0978261;ClusterMaxSizeDiff=0.0756757;ClusterMaxEditDist=0.349206;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=91;DistBack=-82;DistForward=-1;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=91;REFWIDENED=20:40323404-40323494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3183.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:34:0|1:21:0:2:33:./.:2:17:8:1:0/1:13:8:./.:.:.:.:.:.
chr20	40500463	HG2_Ill_SVrefine2DISCOVARplusDovetail_7583	A	ATTTCCTTCCTTCCTTCCTTCCGTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7583:HG4_PB_SVrefine2PBcRDovetail_9377:HG4_PB_HySA_26914:HG4_PB_SVrefine2Falcon1Dovetail_11594:HG4_PB_assemblyticsfalcon_15270:HG2_PB_HySA_33753:HG4_PB_pbsv_18567:HG2_PB_pbsv_18639:HG4_Ill_GATKHCSBGrefine_12563:HG4_Ill_SVrefine2DISCOVARDovetail_12960;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7583:HG4_Ill_SVrefine2DISCOVARDovetail_12960;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0857143;ClusterMaxSizeDiff=0.0857143;ClusterMaxEditDist=0.139373;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=137;DistBack=29525;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=47;REFWIDENED=20:40500464-40500510;PctSeqSimilarity=0.9838;PctSizeSimilarity=0.9928;PctRecOverlap=0.8777;SizeDiff=-1;StartDistance=-16;EndDistance=-16;GTMatch=0;TruScore=95;MatchId=3184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:21:0|1:38:3:0:18:./.:9:3:2:15:0/1:18:11:./.:.:.:.:.:.
chr20	40715393	HG2_Ill_GATKHCSBGrefine_12158	A	AATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6972:HG4_PB_pbsv_18568:HG3_PB_pbsv_18327:HG2_PB_pbsv_18641:HG2_PB_HySA_33755:HG3_PB_HySA_27844:HG2_PB_PB10Xdip_18326:HG4_PB_assemblyticsfalcon_15272:HG2_PB_SVrefine2PBcRplusDovetail_6468:HG2_PB_SVrefine2PB10Xhap12_13628:HG2_Ill_GATKHC_29219:HG2_Ill_GATKHCSBGrefine_12158:HG3_Ill_GATKHCSBGrefine_12019;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12158:HG2_Ill_GATKHC_29219:HG2_PB_SVrefine2PB10Xhap12_13628:HG2_PB_SVrefine2PBcRplusDovetail_6468;NumExactMatchSVs=4;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.208;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=1;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=20:40715394-40715407;PctSeqSimilarity=0.9913;PctSizeSimilarity=0.9825;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:1/1:0:11:0:23:./.:0:0:0:0:./.:0:5:./.:.:.:.:.:.
chr20	41543694	HG2_PB_SVrefine2PB10Xhap12_13631	G	GAAAAAGATATAATTAAGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGTAACAGAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11575:HG3_PB_pbsv_18330:HG2_PB_pbsv_18644:HG4_PB_pbsv_18573:HG2_PB_PB10Xdip_18328:HG2_Ill_breakscan11_4896:HG3_PB_HySA_27847:HG4_PB_HySA_26918:HG2_PB_HySA_33762:HG2_PB_assemblyticsfalcon_15556:HG4_PB_assemblyticsfalcon_15276:HG2_PB_SVrefine2Falcon1plusDovetail_6974:HG2_PB_SVrefine2Falcon2Bionano_9193:HG2_PB_SVrefine2PBcRplusDovetail_6471:HG2_PB_SVrefine2PB10Xhap12_13631:HG4_PB_SVrefine2Falcon1Dovetail_11596;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13631:HG2_PB_SVrefine2PBcRplusDovetail_6471;NumExactMatchSVs=2;ClusterMaxShiftDist=0.103571;ClusterMaxSizeDiff=0.103571;ClusterMaxEditDist=0.198072;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=564;DistBack=31315;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=20:41543695-41534680;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.9947;PctRecOverlap=0.9823;SizeDiff=3;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=99;MatchId=3186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:./.:0:0:0:0:./.:0:0:0:2:./.:0:5:1/1:5:116:.:.:.
chr20	41586912	HG2_PB_SVrefine2Falcon2Bionano_9194	A	AGAGGAGAGGAGGGAAGGGGAGAGGAGGGGAGGGAAGGGGAGGGGAGGGAGCAAGGGAGGAGAGGGAGGAGAGAGAGGAGAGGGAAGGGTGGGGAAGGGAAGAAGGGAGGAAGGGAGGACGGGAGGGCAAAGGAGGAGGGGAGGGGAAGGGAGGAGGGGAGGGGAAGG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_12964:HG3_PB_HySA_27848:HG3_PB_pbsv_18331:HG4_PB_SVrefine2PBcRDovetail_9380:HG3_PB_SVrefine2Falcon1Dovetail_11576:HG2_PB_HySA_33763:HG4_PB_pbsv_18574:HG3_PB_SVrefine2PBcRDovetail_9123:HG2_PB_pbsv_18645:HG3_Ill_SVrefine2DISCOVARDovetail_13158:HG4_PB_SVrefine2Falcon1Dovetail_11597:HG2_PB_SVrefine2PBcRplusDovetail_6472:HG2_PB_SVrefine2Falcon2Bionano_9194:HG2_10X_SVrefine210Xhap12_13034:HG2_PB_SVrefine2Falcon1plusDovetail_6975;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13034:HG2_PB_SVrefine2Falcon2Bionano_9194:HG2_PB_SVrefine2PBcRplusDovetail_6472:HG3_Ill_SVrefine2DISCOVARDovetail_13158:HG3_PB_SVrefine2PBcRDovetail_9123;NumExactMatchSVs=5;ClusterMaxShiftDist=0.193548;ClusterMaxSizeDiff=0.193548;ClusterMaxEditDist=0.258621;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=167;DistBack=41858;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=203;REFWIDENED=20:41586913-41587115;PctSeqSimilarity=0.9714;PctSizeSimilarity=0.994;PctRecOverlap=0.645;SizeDiff=-1;StartDistance=-59;EndDistance=-59;GTMatch=0;TruScore=87;MatchId=3187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:67:./.:0:0:0:0:./.:0:0:0:3:./.:0:0:./.:.:.:.:.:.
chr20	41696667	HG2_PB_SVrefine2PBcRplusDovetail_6473	G	GAGGAGGAAGGGAGGGGAGGAAGGGAGGGGAGGAAGGGAGGGGAGGAAGGAAGGGGAGGGAGGGGAGGAAGGAAGGGGAGGGAGGAAGGAAGGGGAGGGAGGGGAGGAAGGAAGGGGAGGGAGGGGAGGAAGGAAGGGGAGGGAGGGGAGGAAGGAAGGGCAGAGAGGAGGGAAGGAAGGAAGGGCAGAGACGAGGGAAGGAAGGAAGGGCAGAGAGGAGGGAAGGAAGGGGTGAGAGGAGGGAAGGAAGGGGTGAGAGGAGGGAAGGAAGGGGGAGAGGAGGGAAGGAAGGGGGGAGAGGAGAGAAGGAAGGGGGAGAGGAGGGAAGGAAGGGGGAGAGGAGGGAAGGAAGGGGGGAGAGGAGGGAAGGAAGGGGGAGAGGAGGGAAGGAAGTGGGGAGAGGAGGGAAGGAAGGGGGGAGAGGAGGGAAGGAAGGGGGAGAGGAGGGAAGGAAGGGGGAGAGGAGGGAAGGAAGGGGAGAGGAGGAAAGGAAGGGGGAGAGGAGGAAAGGAAGGTGGGAGAGGAGGAAAGGAAGGGGGGAGAGGAGGAAAGGAAGGGGGGAGAGGAGGAAAGGAAGGGGGAGAGGGAGGGAGGAAGGGGGAGGGAGGGAGGAAGGAAGGAAGCAAGCAAGCAAGCAAAGCTGCTCAGAAACTAACTTCAGGAAGAAGGGAGGGAAGCTAACTTCAGAAGCTAACTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6976:HG2_PB_HySA_33765:HG2_PB_pbsv_18646:HG2_PB_HySA_33764:HG4_PB_HySA_26919:HG2_PB_PB10Xdip_18329:HG4_PB_pbsv_18575:HG3_PB_SVrefine2Falcon1Dovetail_11577:HG3_PB_SVrefine2PBcRDovetail_9124:HG2_PB_SVrefine2PB10Xhap12_13632:HG4_PB_SVrefine2PBcRDovetail_9381:HG2_PB_SVrefine2PBcRplusDovetail_6473:HG2_PB_SVrefine2Falcon2Bionano_9195:HG4_PB_SVrefine2Falcon1Dovetail_11598;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6473;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0640466;ClusterMaxSizeDiff=0.0582242;ClusterMaxEditDist=0.17192;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=697;DistBack=89944;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=155;REFWIDENED=20:41696668-41696822;PctSeqSimilarity=0.9871;PctSizeSimilarity=0.9887;PctRecOverlap=0.8865;SizeDiff=-8;StartDistance=-76;EndDistance=-76;GTMatch=0;TruScore=95;MatchId=3188.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:./.:0:0:0:0:./.:0:0:0:0:./.:0:1:0/1:6:39:.:.:.
chr20	41724438	HG2_PB_SVrefine2PB10Xhap12_13633	C	CCTCTCTCCTCCCCCTCTTTCTCTCCCCCACCCTCCTTCTCTCTCCCGTCTCTCTTCTCTCCTCTTCTCTCTCCACCCTCCCTCTCTCTCTTTTCCCCTCTCCCACCTCTCTCCTCCCCCACCCACCTTCTGTCACTCCCTCTCCCTCTCTCTCTCCTGTCTCTCTTCTCTCTCTCCTTCTCTCTCTGCCCTCTCCCTCTCTTTTCCTCTCTCTCCCACACTTCTCTCCTCCCCCCTTTCTCTCCCCCACCCACCTTCTCTCTCTCTCCCTCTCTCTCTTCTCTCTTTCCACCCTCCCTCTCTCCTTCCACCCTCCCTCTCTTTTTCCCTTCTCTCTCCCTACCACCTCTCGCCTCCCTCTTTCTCTTCCCCAACCACCTCTCTCTCTCTTCCTCACTCTCCTCTCTTCTCTCTTTCCACCCTCCCTCTCTTCCCCTCTCTCCCCACCTCTCTCCTCCTCCTCTTTCTCTCCTCCCACCCACTTGCTCTCTCCCTCCCTGTCTCCCTTCCCTTTCCCTCTCCCTCTCCCTCTCTCTCTCTCCTTCTCTCTTTCCACCCTCCCTCTCTTCCCCTCTCTGTCCCCACCTCTCTCCTCCCCCTCTTTCTCTCCTCCCACACGCCTGCTCTCTCCCTCCCTCTCTCCCTTTCCTTTCCCTCTCTCTCTCCCTCTCCCTGTCTCTCTCCTTCTCTCTTTCCACCCTCCCTCTCTCTCTTCCCCTCTGTCTCCCCACTCTCTCCTCCCCCTCTCTCTCCTCCCACCTGCCTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11599:HG3_PB_pbsv_18333:HG2_PB_pbsv_18648:HG4_PB_pbsv_18576:HG2_PB_HySA_33768:HG2_PB_PB10Xdip_18339:HG2_Ill_breakscan11_4897:HG4_PB_HySA_26922:HG3_PB_HySA_27852:HG2_PB_HySA_33767:HG2_PB_pbsv_18647:HG3_PB_SVrefine2Falcon1Dovetail_11578:HG4_PB_SVrefine2PBcRDovetail_9382:HG3_PB_SVrefine2PBcRDovetail_9125:HG2_PB_SVrefine2PB10Xhap12_13633:HG2_PB_SVrefine2Falcon2Bionano_9196:HG2_PB_SVrefine2Falcon1plusDovetail_6977;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9196:HG2_PB_SVrefine2PB10Xhap12_13633:HG3_PB_SVrefine2PBcRDovetail_9125;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0700191;ClusterMaxSizeDiff=0.0649268;ClusterMaxEditDist=0.296573;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=765;DistBack=31;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=118;REFWIDENED=20:41724439-41724556;PctSeqSimilarity=0.995;PctSizeSimilarity=1;PctRecOverlap=0.9621;SizeDiff=0;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=98;MatchId=3189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:./.:0:0:0:0:./.:0:0:0:0:1/1:0:8:1/1:5:92:.:.:.
chr20	42654166	HG2_PB_SVrefine2Falcon2Bionano_9201	T	TGCTATATCTGTGGTTCTTAACAGGCGCGGTTTTGCCTCCCTGCAGACATTTGACAGTGTCTGGAGACATTTTTGATTGTCACAACTGGAGGCTAAGGATGCTGCTAAGCATCCTGTAATGTACAGGACAGAGCCCCCAACCCCTGCCACCAAAAATTATCTGGCCCCATATATCATTGATGCCAAGGCTGTGAGACCCTGCACTACAAACACAGTCAAACATTTTTGTGGACTTACCTTTTCTATTTGTACATTTATCTCCTTTGGGATTTCAAAACTTCTTGAAACAGTCATGTGTCTTCATTTTTCCCAAATTCTGTCCTCCCACCCTTTCCTGGCTTTCGTTTTAAGCCCTTCATTGAAACTTCCCACTTCGTGGTTTTTAATGACCTCCATGTTGCTGAATTCTGGGGTCAGTGCTCAGCCCTTGACTTACTTGCCTGCGCATCAACCTTTGACACAATTGGTCACTTTCTCAGCCTTGCCCAGTGCTTTCCTCACTTGGCTGCTGGGACGCACACTCTCCCGCTCCTCTCTGCTCCCTCCGTGTGAGTCTCCTGAGTTTACCTCTGAGCACTGAAGGGGCCCCAGGGCTCAGTCCTCTTTTTATCTATCGCAGGTGCTCCATGATCCCATCTAGTTTTGTGGTTTCACATACCCTCTATATCCTGAGAACTTCCAAATTTTTATCTCCAGCCCCAAGTATCTCTGTGGTTGTCTAACAGGCATCTGAAACATACTCTCTCCAAAACCAAGGTCCTAAGACTTCCCCTGCCCTGCTCCTCCATTGCCCTCCGCCCCTTCCCATCTCACCAAAAGACAGCTCCATCCTCCCAGTTGCTCAGGCCACACATCTAGGGGTCATCATCCCGGACCACCCTTCTTCTCAGTGAGAGAGCTCTAGGTGAGGACCTGGTTCACAGCCTCCCAGTGCCTTCACATCTCCCTCAAAGTGAGAGCCAGTGATTTATAATGTCCACCAGACCCCGCATAATCTGCATGCCACCCCACCCCCACGGCTTACTCGGCTCCAGCCCTGCCAGCCTCACCAGTCCTTGAACGTGCCACGGACGAGCCTGCCTCGGCTCTTTGCCATTCCGTTCCTTCTGCCTGAAACACGCTTCCGCAGACATCTGCAGAGTATATTCTCATACCTCTGTCTTTCTTAAAAAGTGACTCAGATGTCATTCTCAGGAGGCCCTTCTAAAATTGCACCCCATCCCCCACCCAGCACCTTGAGCTCATCTTCCCTGCTCTATTTTCCTCCCTGGCACTTACCACTGTCTAAAGCACGATATATTTATTTGTGTGTCTGCTGTCACCTCTGTCTCCTTGACTGGAACGCCAGTGCCCTGAGAGCAGGGACTGGGTCTGCTTTGTTCACTGCTGTATCACCAGAACCAAAATCAGTGCCTGGTACATAGGAGGCACTCAACAATTATTTTTAAATAAAATTGGAATGAGTGGTGGGCCAGAAGACATGCACATTTTGAAGCATATTGCCAGGTAATTTTGATTCGGATGACATGGTGGTGATCGTGGGAGCATTAGTGGTTCGAGGTCTTTTCTACTATTTCTCAGGCCCTGTGCTGAGCGCTTCCTCATGCATTATTTAATTCTCATGAAACCTTCGAGGTAGACTCTATTGTCACCCCATTGTATGGATGAGGCAGCTGAGGGGATGGAGCTGTGCAGTGTGTTCTGGAGAAATGTTCAGACCAGGTGGGTCTGCCCAGCATCACTGCACTGAATCCCTACACACCGCCCAGAAAATGGGC	20	PASS	ClusterIDs=HG3_Ill_Spiral_18789:HG3_PB_pbsv_18340:HG4_PB_pbsv_18582:HG2_PB_assemblyticsfalcon_15568:HG4_PB_HySA_26927:HG4_Ill_SVrefine2DISCOVARDovetail_12974:HG3_PB_SVrefine2PBcRDovetail_9130:HG4_PB_SVrefine2PBcRDovetail_9386:HG3_Ill_SVrefine2DISCOVARDovetail_13166:HG2_PB_SVrefine2PBcRplusDovetail_6478:HG2_PB_SVrefine2PB10Xhap12_13638:HG2_PB_SVrefine2Falcon2Bionano_9201:HG2_Ill_SVrefine2DISCOVARplusDovetail_7593:HG2_10X_SVrefine210Xhap12_13044:HG3_PB_SVrefine2Falcon1Dovetail_11584:HG4_PB_SVrefine2Falcon1Dovetail_11603:HG2_PB_SVrefine2Falcon1plusDovetail_6982:HG2_PB_PB10Xdip_18341:HG2_Ill_breakscan11_4898;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13044:HG2_Ill_SVrefine2DISCOVARplusDovetail_7593:HG2_PB_SVrefine2Falcon2Bionano_9201:HG2_PB_SVrefine2PB10Xhap12_13638:HG2_PB_SVrefine2PBcRplusDovetail_6478:HG3_Ill_SVrefine2DISCOVARDovetail_13166:HG4_PB_SVrefine2PBcRDovetail_9386;NumExactMatchSVs=7;ClusterMaxShiftDist=0.064624;ClusterMaxSizeDiff=0.0640668;ClusterMaxEditDist=0.161561;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1777;DistBack=33887;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=20:42654167-42654168;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:114:1/1:0:10:0:16:./.:0:9:0:0:1/1:0:46:./.:14:172:.:1914:.
chr20	42690163	HG3_Ill_GATKHCSBGrefine_12026	G	GAAAAATTGAAAGCAAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13046:HG4_PB_HySA_26931:HG3_PB_pbsv_18342:HG2_PB_pbsv_18655:HG2_PB_HySA_33781:HG4_PB_assemblyticsfalcon_15290:HG2_PB_assemblyticsfalcon_15570:HG3_PB_HySA_27859:HG3_PB_SVrefine2Falcon1Dovetail_11586:HG4_PB_SVrefine2Falcon1Dovetail_11605:HG3_Ill_MetaSV_3049:HG2_PB_SVrefine2PBcRplusDovetail_6480:HG2_PB_SVrefine2PB10Xhap12_13640:HG4_Ill_MetaSV_3001:HG4_Ill_GATKHCSBGrefine_12571:HG3_Ill_GATKHCSBGrefine_12026:HG2_PB_SVrefine2Falcon2Bionano_9203:HG2_Ill_MetaSV_2900:HG2_Ill_GATKHCSBGrefine_12164:HG2_PB_SVrefine2Falcon1plusDovetail_6984:HG2_PB_HySA_33780:HG4_PB_pbsv_18584:HG2_PB_PB10Xdip_18342;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12164:HG2_Ill_MetaSV_2900:HG2_PB_SVrefine2Falcon2Bionano_9203:HG3_Ill_GATKHCSBGrefine_12026:HG4_Ill_GATKHCSBGrefine_12571:HG4_Ill_MetaSV_3001;NumExactMatchSVs=6;ClusterMaxShiftDist=0.172161;ClusterMaxSizeDiff=0.172161;ClusterMaxEditDist=0.205128;PBcalls=16;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=273;DistBack=13110;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=20:42690164-42690177;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9964;PctRecOverlap=0.9927;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:99:1/1:3:34:0:7:./.:1:7:0:0:1/1:0:28:./.:.:.:.:.:.
chr20	43033416	HG3_Ill_SVrefine2DISCOVARDovetail_13169	T	TGTGTTTGTTGATGTGTGTGTATGTGTGCGTGTGTGTGAATTGTGTGTGTGTATGTGTGGACTGTGCGTGTGTTCATGTTCGGACTGTGTGTGTGTATGTAAGTGTGTGTGCGTGTGTGTGACTGTGTGTCTTTGTGTGCCTGTGTGGACTGCTGTGTGTGCGTGGACTGTGTGGTGTGGGTGTGTGCGTGTGTGTGGACTGTGTGGTGTGGGTGTGTGCGTGTGTGTGGACTGTGTGGTGTGGGTGTGTGCGTGTGTGTGTGACCGTGTGGAGTGTGTCTGTGTGCATGTGTGGGCTGTGTGGTGCGTGTGTGCTTATGTTTGGCGTGTGTGTGTGTGTGTGTGTGTGGACTGTGTGGTCTGTGTGTGTGTGCGTGTGTGTGGACTCTGTGGTGTGTGCATGTGTGCATGTATGTGCGTGTGTGTGACTGTGTGGTGTGTGTCTGTGTGCACGTGTGGGCTTATATTTGGTGTGTGTGCATGTGTGGACCGTGTGGTGTGTGTGTGTGCGTGTGTGGACTGTAGTGTGTGTGCACGTGTGTGTGTGCTTGTGTGTGGACTGTGTGTGTGTGGACTGTAGTGTGTGTGCGTGACTGTGGTGTGTGTGCATGACTGTGTGGTGTGTGTGTGCATGTGTGTGGATTGTGTGGTGTGTGTGGACTGTGGGTGTGTGGTGCGTGTGTGTGCTTGTGTGTGGTGTGTGTGCGTGTGTGTGGACTGTGTGGTGCGTGTGTGTGCTTGTGTGTGGACTGTGGATTGTGTGGTGTGTGTGTGCGCAC	20	PASS	ClusterIDs=HG3_PB_pbsv_18345:HG4_PB_SVrefine2Falcon1Dovetail_11608:HG2_PB_pbsv_18659:HG4_PB_pbsv_18587:HG3_PB_pbsv_18346:HG3_PB_SVrefine2Falcon1Dovetail_11589:HG4_PB_SVrefine2PBcRDovetail_9388:HG4_Ill_SVrefine2DISCOVARDovetail_12978:HG3_Ill_SVrefine2DISCOVARDovetail_13169:HG2_PB_SVrefine2PBcRplusDovetail_6483:HG2_PB_SVrefine2PB10Xhap12_13643:HG2_PB_SVrefine2Falcon2Bionano_9206:HG2_Ill_SVrefine2DISCOVARplusDovetail_7596:HG3_Ill_MetaSV_3051:HG4_Ill_MetaSV_3002:HG2_PB_SVrefine2Falcon1plusDovetail_6987:HG2_PB_HySA_33792:HG2_PB_PB10Xdip_18346;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7596:HG2_PB_SVrefine2Falcon2Bionano_9206:HG2_PB_SVrefine2PB10Xhap12_13643:HG2_PB_SVrefine2PBcRplusDovetail_6483:HG3_Ill_SVrefine2DISCOVARDovetail_13169:HG4_Ill_SVrefine2DISCOVARDovetail_12978;NumExactMatchSVs=6;ClusterMaxShiftDist=0.163192;ClusterMaxSizeDiff=0.162098;ClusterMaxEditDist=0.307788;PBcalls=13;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=778;DistBack=13;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=244;REFWIDENED=20:43033417-43033660;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:62:1/1:0:12:2:13:./.:32:630:48:561:1/1:0:14:1/1:2:151:.:915:.
chr20	43392844	HG2_Ill_GATKHCSBGrefine_12169	C	CATCCATCCACCCATCCATCCATCCGTCCATCCATTTATCCATCCATCCATCCATCCATCCATCCATCCATTTATCCATCCGTCCATTTATCCATCCATCCATCCACCCACCCATCCATCCATCCATCCATTT	20	PASS	ClusterIDs=HG3_PB_HySA_27870:HG2_PB_assemblyticsfalcon_15577:HG4_PB_pbsv_18590:HG4_PB_HySA_26938:HG2_PB_pbsv_18661:HG4_PB_SVrefine2PBcRDovetail_9391:HG4_PB_SVrefine2Falcon1Dovetail_11611:HG4_Ill_GATKHCSBGrefine_12575:HG3_PB_SVrefine2PBcRDovetail_9135:HG3_PB_SVrefine2Falcon1Dovetail_11590:HG3_Ill_GATKHC_29150:HG2_PB_SVrefine2Falcon2Bionano_9208:HG2_Ill_GATKHC_29240:HG2_Ill_GATKHCSBGrefine_12169:HG2_PB_SVrefine2PB10Xhap12_13645:HG3_Ill_GATKHCSBGrefine_12029:HG2_PB_SVrefine2Falcon1plusDovetail_6989:HG2_PB_HySA_33795:HG3_PB_pbsv_18348;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12169:HG2_Ill_GATKHC_29240:HG2_PB_SVrefine2Falcon2Bionano_9208:HG3_Ill_GATKHC_29150:HG3_PB_SVrefine2Falcon1Dovetail_11590:HG3_PB_SVrefine2PBcRDovetail_9135:HG4_Ill_GATKHCSBGrefine_12575:HG4_PB_SVrefine2Falcon1Dovetail_11611:HG4_PB_SVrefine2PBcRDovetail_9391;NumExactMatchSVs=9;ClusterMaxShiftDist=0.09319;ClusterMaxSizeDiff=0.09319;ClusterMaxEditDist=0.282609;PBcalls=14;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=132;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=305;REFWIDENED=20:43392592-43392896;PctSeqSimilarity=0.96;PctSizeSimilarity=0.9296;PctRecOverlap=0.8811;SizeDiff=-10;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=92;MatchId=3194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:1:27:1:26:./.:6:51:13:68:./.:3:25:./.:.:.:.:.:.
chr20	44274250	HG2_Ill_SVrefine2DISCOVARplusDovetail_7605	C	CCCTCACCTCCCGGACGGGGTGGCTGGTCGGGTGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCAGCTGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCAGCTGGCCGGGAGGGGCGCTGACCCCCCCACCTCCTTCCCGGATGGGGTGGCTGGCCGGGCGGGGGGCTGACCCCCCCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11614:HG2_PB_pbsv_18665:HG2_PB_PB10Xdip_18351:HG4_PB_pbsv_18594:HG3_PB_SVrefine2PBcRDovetail_9137:HG2_PB_SVrefine2PBcRplusDovetail_6487:HG2_PB_SVrefine2PB10Xhap12_13650:HG2_PB_SVrefine2Falcon2Bionano_9212:HG2_Ill_SVrefine2DISCOVARplusDovetail_7605:HG2_PB_SVrefine2Falcon1plusDovetail_6993;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7605:HG2_PB_SVrefine2Falcon2Bionano_9212:HG2_PB_SVrefine2PB10Xhap12_13650:HG2_PB_SVrefine2PBcRplusDovetail_6487;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0533333;ClusterMaxEditDist=0.26087;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=226;DistBack=10773;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=158;REFWIDENED=20:44274251-44274408;PctSeqSimilarity=0.9906;PctSizeSimilarity=0.9956;PctRecOverlap=0.8238;SizeDiff=1;StartDistance=-39;EndDistance=-39;GTMatch=0;TruScore=93;MatchId=3195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:1:23:1:36:./.:0:3:0:5:1/1:0:34:./.:.:.:.:.:.
chr20	44353652	HG3_Ill_GATKHC_29156	T	TATATATACACATATATATATATATATATATATACACATATATATATATATACAC	20	PASS	ClusterIDs=HG2_PB_HySA_33800:HG4_Ill_scalpel_16863:HG2_Ill_scalpel_17261:HG4_Ill_GATKHC_29216:HG2_Ill_GATKHC_29244:HG3_Ill_svaba_23031:HG3_Ill_scalpel_17600:HG3_Ill_Spiral_18794:HG3_Ill_GATKHC_29156:HG3_Ill_GATKHCSBGrefine_12031:HG4_PB_pbsv_18596;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_12031:HG3_Ill_GATKHC_29156:HG3_Ill_Spiral_18794:HG3_Ill_scalpel_17600:HG3_Ill_svaba_23031;NumExactMatchSVs=5;ClusterMaxShiftDist=0.150943;ClusterMaxSizeDiff=0.150943;ClusterMaxEditDist=0.196078;PBcalls=2;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=-1;DistForward=6;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=46;REFWIDENED=20:44353635-44353680;PctSeqSimilarity=0.9545;PctSizeSimilarity=0.9259;PctRecOverlap=0.9273;SizeDiff=4;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=93;MatchId=3196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:34:0|1:39:4:5:26:./.:2:16:12:1:0/1:19:8:./.:.:.:.:.:.
chr20	44367497	HG2_PB_SVrefine2Falcon1plusDovetail_6995	T	TTATAGTTTACAAAACTATATATATAGTTATATATAGTTATAGTTTACAAAACTATATATAGTTATAGTTTACAAAACTATATATAGTTATATATATAGTTTACAAAACTGTATATATAGTTATATATAGTTTACAAAACTGTATATATAGTTATACATATGGTTTACAAAACTGTATATATAGTTATACATATGTTTACAAAACTGTATGTATAGTTATACATATGTTTACAAAACTGTATGTATAGTTATAATATGGTTTACAAAACTGTATGTATAGTTATATACATATGGTTTACAAAACTGTATGTATAGTTATACATATGGTTTACAAAACTGTATGTATAGTTATACATATGGTTTACAAAACTGTATGTATAGTTATACATATGGTTTACAAAACTGTATGTATAGTTATACATATGGTTTACAAAACTGTATGTATAGTTATACATATGGTTTACAAAACTGTATGTATAGTTATACATATGGTTTACAAAACTGTATGTATAGTTATACATATGGTTTACAAAACTGTATGTATAGTTATACATATGGTTTACAAAACTGTATGTATAGTTATACA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6995:HG3_PB_pbsv_18353:HG3_PB_SVrefine2Falcon1Dovetail_11594:HG4_PB_pbsv_18598;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6995;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0825083;ClusterMaxSizeDiff=0.0825083;ClusterMaxEditDist=0.239274;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=585;DistBack=7972;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=389;REFWIDENED=20:44367498-44367886;PctSeqSimilarity=0.9605;PctSizeSimilarity=0.9949;PctRecOverlap=0.7487;SizeDiff=-3;StartDistance=-146;EndDistance=-146;GTMatch=0;TruScore=90;MatchId=3197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:40:0|1:22:1:0:28:./.:11:1:0:13:0/1:23:4:0/1:9:12:.:.:.
chr20	44428449	HG2_Ill_GATKHCSBGrefine_12179	T	TAAAAGAAAAACAGCTCTCTCCGGTCCGTGCCTCCAAGATGACAAAGAAAAGAAGGAACAATGGTCGTGCCAAAAAGGGCCGCGGCCACGTGCAGCCTATTCGTTGCACTAACTGTGCCCGATGCGTGCCCAAGGACAAGGCCATTAAGAAATTCGTCATTCGAAACATAGTGGAGGCCGCAGCAGTCAGGGACATTTCTGAAGCGAGCGTCTTCGATGCCTATGTGCTTCCCAAGCTGTATGTGAAGCTACATTACTGTGTGAGTTGTGCAATTCACAGCAAAGTAGTCAGGAATCGATCTCGTGAAGCCCGCAAGGACCGAACACCCCCACCCCGATTTAGACCTGCGGGTGCTGCCCCACGTCCCCCACCAAAGCCCATGTAAGGAGCTGAGTTCTTAAAGACTGAAGACAGGCTATTCTCTGGAGAAAAATAAAATGGAAATTGTACTTAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4901:HG4_PB_assemblyticsfalcon_15309:HG2_PB_PB10Xdip_18354:HG4_PB_pbsv_18600:HG2_PB_pbsv_18669:HG4_Ill_MetaSV_3007:HG2_PB_assemblyticsfalcon_15589:HG2_PB_SVrefine2PBcRplusDovetail_6490:HG3_PB_SVrefine2Falcon1Dovetail_11595:HG4_Ill_GATKHCSBGrefine_12584:HG2_PB_SVrefine2Falcon2Bionano_9213:HG2_Ill_MetaSV_2903:HG2_Ill_GATKHCSBGrefine_12179:HG2_10X_SVrefine210Xhap12_13053:HG2_PB_SVrefine2Falcon1plusDovetail_6997:HG4_PB_SVrefine2Falcon1Dovetail_11615:HG2_PB_HySA_33805:HG2_PB_SVrefine2PB10Xhap12_13654;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13053:HG2_Ill_GATKHCSBGrefine_12179:HG2_Ill_MetaSV_2903:HG2_PB_SVrefine2Falcon2Bionano_9213:HG4_Ill_GATKHCSBGrefine_12584;NumExactMatchSVs=5;ClusterMaxShiftDist=0.120253;ClusterMaxSizeDiff=0.120253;ClusterMaxEditDist=0.183299;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=465;DistBack=25787;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=20:44428450-44428463;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:40:./.:22:19:10:14:1|0:0:7:35:0:0/1:18:10:0/1:8:51:.:.:.
chr20	45417758	HG2_PB_PB10Xdip_18356	C	GTGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGTGTGGCAGGTGTGCAGGTGTGTGTTTATTGGATGTGGGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGGGTGTGGCGGGTGTGCAGGTGTGTGTTTATTGGATGTGGGTGTGTGGGTGTGTAGATGTGTGTTTATTGGATGTGAGCGTGTGGGTGTGGGTGTGTGGGTGTGTATGTGTGTGTTTATTGGATGTGAGCATGTGGGTGTGTTTGTGTGTGTTTATTGGATGTGTGTGGGTGTGTAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGTAGGTGTGTGTTTATTGGATGTGTGTGTGGATGTGCAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGTGTGTGGATGTGCAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGTGTGGATGTGCAGGTGTGTGTTTATTGCATGTGAGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGGGCGTGTGGGTGTGCAGTGTGTGTTTATTGGATGTGGGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGTGAGGGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGCGTGTGGGTGTGCAGGTGTGTGTATTGGATGTGTGTGTGGATGTGCAGGTGTGTGTTTATTGGATGTGTGTGTGGATGTGCAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGGGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGGGCGTGTGGATGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGGGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGGGCGTGTGGGTGTGCACGTGTGTGTTTATGGGATGTGGGTGTGTGGGTGTGCACGTGTGTGTTTATTGGATGTGTGTGGGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGGGTGTGGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGGGTGTGTGGGTGTGTAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGTAGGTGTGTGTTTATTGGATGTGTGTGGGTGTGTAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGTAGGTGTGTGTTTATTGGTTGTGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13656:HG4_PB_pbsv_18603:HG3_PB_assemblyticsfalcon_15559:HG2_PB_pbsv_18672:HG3_PB_pbsv_18358:HG2_PB_PB10Xdip_18356:HG4_PB_SVrefine2Falcon1Dovetail_11617:HG3_PB_SVrefine2Falcon1Dovetail_11597:HG2_PB_SVrefine2PBcRplusDovetail_6492:HG2_PB_SVrefine2Falcon1plusDovetail_7000:HG3_PB_SVrefine2PBcRDovetail_9141:HG2_PB_SVrefine2Falcon2Bionano_9215;NumClusterSVs=12;ExactMatchIDs=HG2_PB_PB10Xdip_18356;NumExactMatchSVs=1;ClusterMaxShiftDist=0.122418;ClusterMaxSizeDiff=0.121908;ClusterMaxEditDist=0.218218;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1875;DistBack=-1;DistForward=6;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=516;REFWIDENED=20:45417477-45417992;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9984;PctRecOverlap=0.9989;SizeDiff=3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:96:1/1:2:25:3:30:./.:327:453:288:492:./.:1:1:./.:10:162:.:1980:.
chr20	46154614	HG3_Ill_GATKHCSBGrefine_12041	G	GCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGTCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACAGGT	20	PASS	ClusterIDs=HG3_PB_pbsv_18361:HG4_Ill_GATKHCSBGrefine_12590:HG3_PB_assemblyticsfalcon_15568:HG3_PB_SVrefine2Falcon1Dovetail_11600:HG4_PB_assemblyticsfalcon_15326:HG4_PB_SVrefine2Falcon1Dovetail_11620:HG3_PB_SVrefine2PBcRDovetail_9143:HG2_PB_assemblyticsfalcon_15603:HG2_PB_SVrefine2Falcon1plusDovetail_7002:HG2_PB_pbsv_18674:HG3_Ill_GATKHCSBGrefine_12041:HG4_PB_pbsv_18608:HG2_Ill_GATKHCSBGrefine_12184:HG2_PB_PB10Xdip_18358:HG2_PB_SVrefine2PBcRplusDovetail_6494:HG2_PB_SVrefine2PB10Xhap12_13659:HG2_PB_SVrefine2Falcon2Bionano_9217;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12184:HG3_Ill_GATKHCSBGrefine_12041:HG4_Ill_GATKHCSBGrefine_12590;NumExactMatchSVs=3;ClusterMaxShiftDist=0.136054;ClusterMaxSizeDiff=0.136054;ClusterMaxEditDist=0.287671;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=148;DistBack=-112;DistForward=7233;DistMin=-112;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=124;REFWIDENED=20:46154603-46154726;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:35:1/1:1:10:1:20:./.:0:1:0:1:./.:1:16:./.:.:.:.:.:.
chr20	46294751	HG2_PB_SVrefine2Falcon1plusDovetail_7003	C	CCAGGTGCCCAAGAGGTGTGGGAAGCCCTTGCCGAGGTCTGTCCTGTCCCCTTCACCCTCGACTTCCACCTGGACACTCACCGATGTGTCACTTTAATGGGGTTGGCGGCTGAATAGTCGGGAAGGCCTCCAGTGCCACTGAAGTCCCCACCATCCTTGTCATCTTGGTCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7003:HG4_PB_pbsv_18609:HG2_PB_HySA_33829:HG2_PB_HySA_33828:HG2_PB_PB10Xdip_18359:HG2_PB_HySA_33827:HG2_PB_pbsv_18675:HG4_PB_SVrefine2Falcon1Dovetail_11621:HG3_PB_HySA_27892:HG4_Ill_SVrefine2DISCOVARDovetail_12994:HG3_PB_SVrefine2Falcon1Dovetail_11601:HG2_PB_SVrefine2PBcRplusDovetail_6495:HG2_PB_SVrefine2PB10Xhap12_13660:HG2_PB_SVrefine2Falcon2Bionano_9218;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7003:HG4_PB_SVrefine2Falcon1Dovetail_11621:HG4_Ill_SVrefine2DISCOVARDovetail_12994:HG3_PB_SVrefine2Falcon1Dovetail_11601:HG2_PB_SVrefine2PBcRplusDovetail_6495:HG2_PB_SVrefine2PB10Xhap12_13660:HG2_PB_SVrefine2Falcon2Bionano_9218;NumExactMatchSVs=7;ClusterMaxShiftDist=0.106509;ClusterMaxSizeDiff=0.0946746;ClusterMaxEditDist=0.258621;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=171;DistBack=3154;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=352;REFWIDENED=20:46294752-46295103;PctSeqSimilarity=0.9947;PctSizeSimilarity=0.9942;PctRecOverlap=0.341;SizeDiff=-1;StartDistance=-113;EndDistance=-113;GTMatch=0;TruScore=77;MatchId=3203.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:73:1/1:1:6:1:4:./.:0:0:1:0:0/1:11:2:./.:.:.:.:.:.
chr20	46489916	HG4_Ill_GATKHC_29245	T	TACAATTGTCAAAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAACAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_18373:HG2_PB_pbsv_18677:HG4_PB_pbsv_18612:HG4_Ill_svaba_22779:HG4_Ill_GATKHC_29245:HG4_Ill_GATKHCSBGrefine_12591:HG2_Ill_svaba_22818:HG2_Ill_GATKHC_29267:HG2_Ill_GATKHCSBGrefine_12185:HG4_PB_HySA_26963;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12185:HG2_Ill_GATKHC_29267:HG2_Ill_svaba_22818:HG4_Ill_GATKHCSBGrefine_12591:HG4_Ill_GATKHC_29245:HG4_Ill_svaba_22779;NumExactMatchSVs=6;ClusterMaxShiftDist=0.263158;ClusterMaxSizeDiff=0.245614;ClusterMaxEditDist=0.280702;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=16901;DistForward=23042;DistMin=16901;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=23;REFWIDENED=20:46489917-46489939;PctSeqSimilarity=0.9916;PctSizeSimilarity=0.9831;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3204.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:23:0|1:31:1:1:19:1|0:0:7:24:0:0/1:28:6:./.:.:.:.:.:.
chr20	47428188	HG2_PB_pbsv_18683	T	TTTGCATTGCACACTACTGACCAGACCCTGGATACCAACACACACACGTGTTGCATGCCACCATTACTGACCAGACCTGGATACACACACACGTGGTGCATGCACACTACTGACCAGACCTGGGGAATTACACACACAACACGTGCATGCCACACTACTGACCAGACCTGGATACACACACACACGACACGTGTGCATGCACACTACTGACCAGACCTGCGATACACCACACCACACACGCACGTGTGCATTGCACACTACTGACCAGACCTGAGTAACACACAACACACACGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9224:HG3_PB_HySA_27900:HG2_PB_pbsv_18683:HG2_PB_SVrefine2Falcon1plusDovetail_7012:HG3_PB_SVrefine2Falcon1Dovetail_11614;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_18683;NumExactMatchSVs=1;ClusterMaxShiftDist=0.107826;ClusterMaxSizeDiff=0.0959147;ClusterMaxEditDist=0.189983;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=294;DistBack=22;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=190;REFWIDENED=20:47428043-47428232;PctSeqSimilarity=0.9538;PctSizeSimilarity=0.9388;PctRecOverlap=0.939;SizeDiff=18;StartDistance=6;EndDistance=6;GTMatch=0;TruScore=94;MatchId=3205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:45:0|1:35:2:2:25:./.:44:0:19:24:0/1:29:5:./.:.:.:.:.:.
chr20	47575930	HG2_PB_SVrefine2PB10Xhap12_13671	T	TTCCTTCCCTCCTTCCTTCCCTCCCTCCCTCCCTTCTTCCTTCCCTCCGTCCCTCCTTCCCTCCCTCCCTCCCTTCTTGTCTCCTTCTCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCCTCCCTCCCTCCCTCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCATCCCTCCCTGCTTCCTTCCCTCCGTCCCTCCTTCCCTCCCTCCCTCCTTTCTTCTCTCCTTCCCTCCCTCCCTCCTTCCTTCCCTCCTTCCCTCCCTCCCTTCTTCCTTCCCTTCTTCCTTTCCTCCTTCCTTTTCTCCTTCCCTCCCTCCC	10	PASS	ClusterIDs=HG2_PB_pbsv_18685:HG2_PB_HySA_33845:HG3_PB_SVrefine2Falcon1Dovetail_11617:HG4_PB_pbsv_18621:HG2_PB_SVrefine2PBcRplusDovetail_6504:HG2_PB_SVrefine2Falcon1plusDovetail_7014:HG2_PB_SVrefine2PB10Xhap12_13671:HG2_PB_SVrefine2Falcon2Bionano_9226:HG4_PB_SVrefine2Falcon1Dovetail_11630:HG3_PB_SVrefine2Falcon1Dovetail_11616:HG4_PB_SVrefine2PBcRDovetail_9411:HG3_PB_SVrefine2PBcRDovetail_9149;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13671:HG2_PB_SVrefine2PBcRplusDovetail_6504;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0754148;ClusterMaxSizeDiff=0.0722892;ClusterMaxEditDist=0.266862;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=328;DistBack=30889;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=229;REFWIDENED=20:47575931-47576159;PctSeqSimilarity=0.9715;PctSizeSimilarity=0.9619;PctRecOverlap=0.7302;SizeDiff=-13;StartDistance=-86;EndDistance=-86;GTMatch=0;TruScore=88;MatchId=3206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:44:1/1:0:14:1:21:./.:0:25:2:24:./.:0:3:0/1:2:18:.:.:.
chr20	48579553	HG3_PB_SVrefine2Falcon1Dovetail_11621	G	GTTTGTTTTTTTTTTGAGATGGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCAGAGTAGCTAGGACTACAGGCGCCCGCCACCACGCCAAGCTAATTTTTTGTATTTTGTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGCTACACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGTGAATT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9230:HG3_PB_HySA_27909:HG2_PB_HySA_33852:HG2_PB_PB10Xdip_18421:HG4_PB_pbsv_18624:HG2_PB_pbsv_18690:HG2_PB_SVrefine2PB10Xhap12_13678:HG4_PB_SVrefine2Falcon1Dovetail_11633:HG4_PB_SVrefine2PBcRDovetail_9415:HG3_PB_SVrefine2PBcRDovetail_9152:HG3_PB_SVrefine2Falcon1Dovetail_11621;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11621:HG3_PB_SVrefine2PBcRDovetail_9152:HG4_PB_SVrefine2PBcRDovetail_9415;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0685155;ClusterMaxSizeDiff=0.0685155;ClusterMaxEditDist=0.241158;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=305;DistBack=11034;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=604;REFWIDENED=20:48579554-48580157;PctSeqSimilarity=0.9587;PctSizeSimilarity=1;PctRecOverlap=0.177;SizeDiff=0;StartDistance=-251;EndDistance=-251;GTMatch=0;TruScore=71;MatchId=3207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:0|1:21:5:1:11:./.:3:11:5:2:0/1:20:11:0/1:5:7:.:.:.
chr20	48628273	HG2_PB_SVrefine2PB10Xhap12_13679	G	AGGGAGTGGGGGAGGGGAGGGTGAGGGGAGGGGAAAGGGGAGGGAAGGAGAGAGAGGAGGGGAGGGGAGAGGGGAGGGGAGGGGAGGGAAGGGAAGGGGA	10	PASS	ClusterIDs=HG2_PB_HySA_33854:HG2_PB_SVrefine2PBcRplusDovetail_6509:HG2_PB_assemblyticsfalcon_15633:HG4_PB_assemblyticsfalcon_15356:HG4_PB_SVrefine2Falcon1Dovetail_11634:HG2_PB_SVrefine2Falcon1plusDovetail_7019:HG2_PB_pbsv_18691:HG2_PB_PB10Xdip_18422:HG2_PB_SVrefine2PB10Xhap12_13679:HG4_PB_pbsv_18625:HG3_PB_HySA_27910:HG3_PB_pbsv_18379:HG4_PB_HySA_26981:HG2_PB_HySA_33855:HG4_PB_SVrefine2PBcRDovetail_9416:HG3_PB_SVrefine2Falcon1Dovetail_11622:HG3_PB_SVrefine2PBcRDovetail_9153:HG2_PB_SVrefine2Falcon2Bionano_9231;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13679:HG2_PB_SVrefine2PBcRplusDovetail_6509;NumExactMatchSVs=2;ClusterMaxShiftDist=0.176166;ClusterMaxSizeDiff=0.176166;ClusterMaxEditDist=0.287234;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=99;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=20:48628274-48628272;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.99;PctRecOverlap=0.9505;SizeDiff=-1;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=97;MatchId=3208.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:2:21:0:16:1/1:0:8:0:6:./.:0:7:./.:.:.:.:.:.
chr20	50357099	HG3_Ill_SVrefine2DISCOVARDovetail_13205	A	AATTAGGCTGGGCACAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTAACCAACATGAGGAAACCCCGTCTCTACTAAAAATACAAAATTAGATGGGCGTGGTGGCGCATGCCTGTAATTCAAACTACTTGGAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGACAGAGGTTGTGGTAAGCCAAGATCATGCCATTGTACTCCAGCATGGGCAACAAGAGTGAGACTCCATCTCAAAAAAAAAAAAAATTAGCCAGGCGTGGTGGTGGGCACCTGTAATCCCAGCTACCCTGGAGACTGAGGCAGAAGAATCGCTTGAACCCAGGAGGCGGAGATTGCAGTGAGCCAAGATTACGCCACTGCACTCCAGCCTGGGCACCAAGAGCAAAACCCTGTCTCAAAAAAATAAACAAATAAAAAGATTTCTGTCTGCCACACGGCTGGGCCATGTGTAAAGACACATTCCTGTTGGTTTTATGTGTCTTGAATTCTAATGGG	20	PASS	ClusterIDs=HG4_PB_pbsv_18641:HG3_PB_assemblyticsfalcon_15613:HG3_PB_SVrefine2Falcon1Dovetail_11630:HG3_PB_pbsv_18392:HG4_Ill_Spiral_1431:HG3_Ill_Spiral_18843:HG2_PB_PB10Xdip_18430:HG2_Ill_Spiral_1200:HG4_PB_HySA_27004:HG4_Ill_manta_4201:HG4_Ill_SVrefine2DISCOVARDovetail_13014:HG4_Ill_MetaSV_3015:HG4_Ill_GATKHCSBGrefine_12610:HG3_Ill_SVrefine2DISCOVARDovetail_13205:HG3_Ill_MetaSV_3061:HG3_Ill_GATKHCSBGrefine_12055:HG2_PB_assemblyticsfalcon_15658:HG2_PB_SVrefine2PBcRplusDovetail_6520:HG2_PB_SVrefine2Falcon1plusDovetail_7028:HG2_Ill_SVrefine2DISCOVARplusDovetail_7632:HG2_Ill_MetaSV_2914:HG2_Ill_GATKHCSBGrefine_12203:HG4_PB_assemblyticsfalcon_15375:HG2_PB_SVrefine2Falcon2Bionano_9239:HG4_PB_SVrefine2PBcRDovetail_9425:HG3_PB_SVrefine2PBcRDovetail_9158:HG2_PB_SVrefine2PB10Xhap12_13690:HG2_10X_SVrefine210Xhap12_13076:HG4_PB_SVrefine2Falcon1Dovetail_11640:HG2_PB_pbsv_18706;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12203:HG2_Ill_MetaSV_2914:HG2_Ill_SVrefine2DISCOVARplusDovetail_7632:HG2_PB_SVrefine2Falcon1plusDovetail_7028:HG2_PB_SVrefine2PBcRplusDovetail_6520:HG2_PB_assemblyticsfalcon_15658:HG3_Ill_GATKHCSBGrefine_12055:HG3_Ill_MetaSV_3061:HG3_Ill_SVrefine2DISCOVARDovetail_13205:HG4_Ill_GATKHCSBGrefine_12610:HG4_Ill_MetaSV_3015:HG4_Ill_SVrefine2DISCOVARDovetail_13014:HG4_Ill_manta_4201;NumExactMatchSVs=13;ClusterMaxShiftDist=0.05;ClusterMaxSizeDiff=0.0410714;ClusterMaxEditDist=0.215302;PBcalls=16;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=549;DistBack=20753;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=20:50357100-50357099;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:30:0:25:1/1:0:11:0:12:1/1:0:32:1/1:3:123:.:.:.
chr20	50570359	HG3_PB_HySA_27936	T	TAAAAAATGCAAATCCGGCCGGGCGCGGGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGACGGTCAGGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCGGGCGTGGTGGCGGGCGCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCCTCAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_27936:HG3_PB_pbsv_18394:HG2_PB_pbsv_18708:HG2_PB_assemblyticsfalcon_15660:HG3_PB_assemblyticsfalcon_15617:HG2_PB_SVrefine2Falcon1plusDovetail_7029:HG2_Ill_GATKHCSBGrefine_12205:HG2_PB_HySA_33880:HG2_PB_SVrefine2Falcon2Bionano_9240:HG3_PB_SVrefine2Falcon1Dovetail_11632;NumClusterSVs=10;ExactMatchIDs=HG3_PB_HySA_27936;NumExactMatchSVs=1;ClusterMaxShiftDist=0.134426;ClusterMaxSizeDiff=0.134426;ClusterMaxEditDist=0.189684;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=307;DistBack=60145;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=20:50570360-50570373;PctSeqSimilarity=0.9806;PctSizeSimilarity=0.9903;PctRecOverlap=0.9871;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:0|1:23:1:1:26:1|0:0:7:29:0:0/1:23:11:0/1:8:20:.:.:.
chr20	50708372	HG2_PB_HySA_33881	C	CACAAAAAAATTAGGCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCGCTTCCTCTCCCTCTCCTCTCCCGTCTCCCTCTCCCTCTCCCCGTCTCCCTCTCCCTCTCCCTCTCCCTCTCTCCGTCTTCCCTCTCCCTCTCATGCCGAGCCAAAGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTTTTTTTTTGGTGGAGATGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCGCGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATATGAGGAGCCCTCTGCCTGGCTGCCCAGTGTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGAAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCACCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCGCCGCACCCTGTCTGGGAGGTGAGGAGTGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCTGGCAACCACCTGTCTGGGAAGTGAGGAGCATCTCCGCCCGCGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGACCCCCCCGCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGCTCCTCTGCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCCGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGGGGGGGTCGGCCAGCCGCCCCGGCCGGGAGGTGAGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAACCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCAGGAGGGAGGTGGGGGGGTCAGGCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGAGGGGGGAGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCAGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGAACAGCCCCCCGCCCGGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGAGGGCGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCATCTGGGAGGTGAGGGGCACTTCTGCCGGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAAAGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCTGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAGACATGTGCTGTGTCCACTCAGGGTTAGATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTGAACAGATGCTTGAGGGCAGCATGCTAGTTGAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACGCTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAATTAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9241:HG4_PB_pbsv_18645:HG3_PB_pbsv_18395:HG2_PB_HySA_33881:HG2_PB_pbsv_18709:HG2_PB_PB10Xdip_18433:HG2_PB_assemblyticsfalcon_15661:HG3_PB_assemblyticsfalcon_15618:HG4_PB_assemblyticsfalcon_15380:HG2_PB_assemblyticsPBcR_15243:HG2_PB_SVrefine2Falcon1plusDovetail_7030:HG3_PB_SVrefine2Falcon1Dovetail_11633:HG4_PB_SVrefine2Falcon1Dovetail_11642:HG2_PB_SVrefine2PBcRplusDovetail_6522:HG2_PB_SVrefine2PB10Xhap12_13692:HG3_PB_SVrefine2PBcRDovetail_9159;NumClusterSVs=16;ExactMatchIDs=HG2_PB_HySA_33881;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0748464;ClusterMaxSizeDiff=0.074474;ClusterMaxEditDist=0.179931;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=2664;DistBack=32888;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=20:50708373-50708373;PctSeqSimilarity=0.9921;PctSizeSimilarity=0.9944;PctRecOverlap=0.9948;SizeDiff=-15;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=99;MatchId=3212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:70:1/1:0:15:0:18:1/1:0:6:0:8:./.:1:19:1/1:7:452:.:2668:.
chr20	51142744	HG3_Ill_scalpel_17652	C	CTTGTTTTTGTAAATAAAGCTTTGTTAAAACAGTTATGTGCATTCATTTATGCATTGTCTGGCTTGTGGCCTAGCCAT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13081:HG2_PB_pbsv_18711:HG3_PB_pbsv_18397:HG3_Ill_svaba_23087:HG3_Ill_scalpel_17652:HG3_Ill_manta_4034:HG3_Ill_Krunchall_24282:HG3_Ill_GATKHC_29238:HG3_Ill_GATKHCSBGrefine_12060:HG3_Ill_250bpfermikitraw_23696:HG3_Ill_150bpfermikitraw_23010:HG2_Ill_svaba_22864:HG2_Ill_scalpel_17316:HG2_Ill_manta_4940:HG2_Ill_Krunchall_24738:HG2_Ill_GATKHC_29334:HG2_Ill_GATKHCSBGrefine_12209:HG2_Ill_250bpfermikitraw_24393:HG2_Ill_150bpfermikitraw_22972:HG3_PB_HySA_27942:HG2_PB_HySA_33888:HG3_Ill_SVrefine2DISCOVARDovetail_13210:HG2_PB_SVrefine2PB10Xhap12_13695;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22972:HG2_Ill_250bpfermikitraw_24393:HG2_Ill_GATKHCSBGrefine_12209:HG2_Ill_GATKHC_29334:HG2_Ill_Krunchall_24738:HG2_Ill_manta_4940:HG2_Ill_scalpel_17316:HG2_Ill_svaba_22864:HG3_Ill_150bpfermikitraw_23010:HG3_Ill_250bpfermikitraw_23696:HG3_Ill_GATKHCSBGrefine_12060:HG3_Ill_GATKHC_29238:HG3_Ill_Krunchall_24282:HG3_Ill_manta_4034:HG3_Ill_scalpel_17652:HG3_Ill_svaba_23087;NumExactMatchSVs=16;ClusterMaxShiftDist=0.075;ClusterMaxSizeDiff=0.05;ClusterMaxEditDist=0.25;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=77;DistBack=69217;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=157;REFWIDENED=20:51142647-51142803;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3213.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:58:0|1:42:8:0:46:1|0:2:21:18:0:0/1:19:24:./.:.:.:.:.:.
chr20	51608002	HG4_PB_pbsv_18648	T	TGTGGGTAAGTGTGTGTTGTGGGGGGAGAGAATGTAAAGCTTTCTGATGCAATGATTTTGGTGGTGATTGAGTGTAC	10	PASS	ClusterIDs=HG4_PB_HySA_27016:HG4_PB_assemblyticsfalcon_15386:HG4_PB_HySA_27017:HG2_PB_PB10Xdip_18446:HG4_PB_pbsv_18648:HG3_PB_assemblyticsfalcon_15627;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_18648;NumExactMatchSVs=1;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.282051;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=76;DistBack=56;DistForward=187;DistMin=56;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=430;REFWIDENED=20:51607591-51608020;PctSeqSimilarity=0.9478;PctSizeSimilarity=0.962;PctRecOverlap=0.4051;SizeDiff=-3;StartDistance=46;EndDistance=46;GTMatch=0;TruScore=77;MatchId=3214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:33:0|1:22:2:6:23:0/0:38:0:41:0:0/0:26:0:./.:.:.:.:.:.
chr20	52032211	HG2_PB_SVrefine2PB10Xhap12_13699	G	GATGTATGTGTGTATATACATATTATATATGTGTGTGTGCATGTGTGTATATATGTGTGTACACATGTTCATGCCTGTGTACTATATATGTGTATGTGTAGTAAAACATATATGTGTATATACATCTATGTATGTGCATGTGTGTATATGTGTGTGCACGTGTGCGTGCTTGTGTACTTTAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7644:HG4_PB_HySA_27023:HG2_PB_pbsv_18717:HG4_PB_pbsv_18652:HG4_Ill_GATKHCSBGrefine_12619:HG4_Ill_manta_4205:HG4_Ill_MetaSV_3017:HG2_Ill_manta_4942:HG2_Ill_MetaSV_2915:HG3_Ill_manta_4036:HG3_Ill_Spiral_18855:HG3_Ill_MetaSV_3062:HG3_Ill_GATKHCSBGrefine_12064:HG2_Ill_GATKHCSBGrefine_12214:HG2_PB_PB10Xdip_18449:HG2_Ill_breakscan11_4905:HG4_PB_assemblyticsfalcon_15392:HG4_PB_SVrefine2Falcon1Dovetail_11646:HG3_PB_pbsv_18402:HG2_PB_SVrefine2Falcon2Bionano_9244:HG4_PB_SVrefine2PBcRDovetail_9429:HG4_Ill_SVrefine2DISCOVARDovetail_13026:HG3_PB_SVrefine2Falcon1Dovetail_11636:HG3_Ill_SVrefine2DISCOVARDovetail_13214:HG2_10X_SVrefine210Xhap12_13086:HG3_PB_SVrefine2PBcRDovetail_9163:HG2_PB_SVrefine2PBcRplusDovetail_6527:HG2_PB_SVrefine2PB10Xhap12_13699:HG2_PB_SVrefine2Falcon1plusDovetail_7036;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7644:HG3_PB_SVrefine2PBcRDovetail_9163:HG2_PB_SVrefine2PBcRplusDovetail_6527:HG2_PB_SVrefine2PB10Xhap12_13699:HG2_PB_SVrefine2Falcon1plusDovetail_7036;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0748663;ClusterMaxSizeDiff=0.0641711;ClusterMaxEditDist=0.270833;PBcalls=14;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=181;DistBack=320;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=20:52032212-52032267;PctSeqSimilarity=0.9758;PctSizeSimilarity=0.9731;PctRecOverlap=0.8663;SizeDiff=-5;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=93;MatchId=3215.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:79:1/1:0:47:1:19:1/1:1:74:1:55:1/1:0:18:./.:.:.:.:.:.
chr20	52637936	HG2_PB_SVrefine2PB10Xhap12_13700	T	TAAAAAAAAAGTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_18721:HG2_PB_assemblyticsPBcR_15271:HG4_PB_pbsv_18657:HG3_PB_pbsv_18406:HG2_PB_SVrefine2Falcon1plusDovetail_7039:HG2_PB_PB10Xdip_18455:HG3_PB_SVrefine2Falcon1Dovetail_11637:HG2_PB_SVrefine2Falcon2Bionano_9246:HG2_PB_SVrefine2PBcRplusDovetail_6528:HG2_PB_SVrefine2PB10Xhap12_13700:HG2_Ill_SVrefine2DISCOVARplusDovetail_7647:HG2_10X_SVrefine210Xhap12_13089:HG4_PB_SVrefine2Falcon1Dovetail_11650:HG2_PB_HySA_33908:HG2_Ill_breakscan11_4906;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13089:HG2_Ill_SVrefine2DISCOVARplusDovetail_7647:HG2_PB_SVrefine2PB10Xhap12_13700:HG2_PB_SVrefine2PBcRplusDovetail_6528;NumExactMatchSVs=4;ClusterMaxShiftDist=0.118936;ClusterMaxSizeDiff=0.118936;ClusterMaxEditDist=0.204511;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=318;DistBack=-14;DistForward=0;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=20:52637937-52637949;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:97:./.:0:1:0:2:./.:0:9:0:0:1/1:0:19:1/1:2:68:.:.:.
chr20	52725222	HG3_PB_SVrefine2Falcon1Dovetail_11639	A	AGGATTTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG4_PB_HySA_27027:HG4_PB_pbsv_18660:HG2_PB_pbsv_18722:HG3_PB_assemblyticsfalcon_15642:HG3_PB_pbsv_18407:HG4_PB_assemblyticsfalcon_15398:HG2_PB_assemblyticsPBcR_15273:HG2_Ill_breakscan11_4907:HG2_PB_SVrefine2Falcon2Bionano_9247:HG4_PB_SVrefine2Falcon1Dovetail_11652:HG4_PB_SVrefine2PBcRDovetail_9434:HG2_PB_SVrefine2PBcRplusDovetail_6529:HG2_PB_SVrefine2PB10Xhap12_13701:HG4_Ill_MetaSV_3021:HG3_PB_SVrefine2Falcon1Dovetail_11639:HG2_PB_PB10Xdip_18456:HG2_10X_SVrefine210Xhap12_13091:HG2_Ill_MetaSV_2918:HG3_PB_HySA_27955:HG2_PB_SVrefine2Falcon1plusDovetail_7040:HG3_PB_SVrefine2PBcRDovetail_9164:HG2_PB_HySA_33910;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13091:HG2_PB_PB10Xdip_18456:HG3_PB_SVrefine2Falcon1Dovetail_11639:HG4_Ill_MetaSV_3021;NumExactMatchSVs=4;ClusterMaxShiftDist=0.136434;ClusterMaxSizeDiff=0.136434;ClusterMaxEditDist=0.207752;PBcalls=18;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=321;DistBack=17748;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=20:52725223-52725238;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3217.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:86:1/1:0:11:0:9:1/1:0:6:0:7:1/1:0:15:1/1:2:73:.:.:.
chr20	53657891	HG2_Ill_GATKHCSBGrefine_12222	T	TAAAAAAAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4908:HG2_PB_pbsv_18725:HG3_PB_assemblyticsfalcon_15644:HG4_PB_pbsv_18666:HG4_PB_SVrefine2Falcon1Dovetail_11655:HG3_PB_SVrefine2Falcon1Dovetail_11641:HG2_PB_SVrefine2Falcon1plusDovetail_7042:HG2_Ill_MetaSV_2920:HG4_Ill_MetaSV_3024:HG4_Ill_GATKHCSBGrefine_12627:HG2_Ill_GATKHCSBGrefine_12222:HG2_PB_SVrefine2Falcon2Bionano_9249:HG4_PB_assemblyticsfalcon_15402;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12222:HG4_Ill_GATKHCSBGrefine_12627;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0888889;ClusterMaxSizeDiff=0.0888889;ClusterMaxEditDist=0.137161;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=1385;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=20:53657892-53657902;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:62:40:./.:14:18:42:11:1|0:0:5:19:0:0/1:39:13:0/1:5:23:.:.:.
chr20	53761840	HG3_Ill_GATKHCSBGrefine_12074	T	TGAAAAATTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3065:HG2_PB_pbsv_18727:HG3_PB_pbsv_18411:HG2_PB_HySA_33916:HG4_PB_pbsv_18668:HG4_PB_assemblyticsfalcon_15405:HG3_PB_assemblyticsfalcon_15647:HG2_PB_assemblyticsPBcR_15276:HG2_PB_HySA_33915:HG3_PB_HySA_27962:HG4_PB_HySA_27033:HG2_Ill_breakscan11_4909:HG2_PB_PB10Xdip_18458:HG2_PB_SVrefine2Falcon2Bionano_9250:HG4_PB_SVrefine2Falcon1Dovetail_11656:HG4_PB_SVrefine2PBcRDovetail_9437:HG3_PB_SVrefine2Falcon1Dovetail_11642:HG4_Ill_MetaSV_3025:HG4_Ill_GATKHCSBGrefine_12629:HG3_PB_SVrefine2PBcRDovetail_9166:HG3_Ill_GATKHCSBGrefine_12074:HG2_PB_SVrefine2PBcRplusDovetail_6531:HG2_PB_SVrefine2PB10Xhap12_13704:HG2_Ill_MetaSV_2921:HG2_PB_SVrefine2Falcon1plusDovetail_7043;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_MetaSV_2921:HG2_PB_SVrefine2PB10Xhap12_13704:HG2_PB_SVrefine2PBcRplusDovetail_6531:HG3_Ill_GATKHCSBGrefine_12074:HG3_PB_SVrefine2PBcRDovetail_9166:HG4_Ill_GATKHCSBGrefine_12629:HG4_Ill_MetaSV_3025;NumExactMatchSVs=7;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.220211;PBcalls=19;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=317;DistBack=5800;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=10;REFWIDENED=20:53761841-53761850;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:80:1/1:1:11:0:14:1/1:0:8:0:9:1/1:0:24:1/1:2:68:.:.:.
chr20	54161347	HG2_Ill_manta_4948	ATG	GATCATATATATCATATATGATCATATATATCCTATATGATCATATATATCATATGATCATATATATCATATATGATCATATATATCATATGATCATATATATCATATGATCATATATATCATATATGATCATATAT	20	PASS	ClusterIDs=HG2_Ill_svaba_22891:HG4_Ill_manta_4212:HG4_Ill_SVrefine2DISCOVARDovetail_13038:HG2_PB_SVrefine2Falcon2Bionano_9254:HG2_Ill_manta_4948:HG2_Ill_SVrefine2DISCOVARplusDovetail_7652:HG4_PB_SVrefine2PBcRDovetail_9441:HG4_PB_pbsv_18671:HG4_Ill_svaba_22841;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7652:HG2_Ill_manta_4948:HG2_PB_SVrefine2Falcon2Bionano_9254:HG4_Ill_SVrefine2DISCOVARDovetail_13038:HG4_Ill_manta_4212;NumExactMatchSVs=5;ClusterMaxShiftDist=0.160584;ClusterMaxSizeDiff=0.160584;ClusterMaxEditDist=0.189781;PBcalls=3;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=134;DistBack=-48;DistForward=11;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=77;REFWIDENED=20:54161321-54161397;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9926;PctRecOverlap=0.927;SizeDiff=-1;StartDistance=8;EndDistance=10;GTMatch=0;TruScore=97;MatchId=3221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:./.:11:16:21:5:./.:0:21:22:7:0/1:21:25:./.:.:.:.:.:.
chr20	54406740	HG2_PB_SVrefine2PB10Xhap12_13710	T	TATACACACACCACGCGTAGTGTGTATATATTTCATATACACACACACACGCGTAGTGTGTATATATTTCATATACACACACACACGCGTAGTGTGTATATATTTCATATATACACACACACGCGTAGTGTGTATATATTTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7048:HG2_PB_assemblyticsPBcR_15284:HG3_Ill_SVrefine2DISCOVARDovetail_13228:HG2_PB_SVrefine2PBcRplusDovetail_6536:HG2_PB_SVrefine2PB10Xhap12_13710:HG2_Ill_SVrefine2DISCOVARplusDovetail_7656:HG2_PB_pbsv_18735:HG3_Ill_manta_4041:HG2_PB_SVrefine2Falcon2Bionano_9256:HG2_Ill_manta_4954:HG2_PB_HySA_33933:HG4_Ill_GATKHCSBGrefine_12635:HG2_Ill_GATKHCSBGrefine_12229:HG4_PB_pbsv_18676:HG3_PB_pbsv_18419;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7656:HG2_PB_SVrefine2PB10Xhap12_13710:HG2_PB_SVrefine2PBcRplusDovetail_6536:HG3_Ill_SVrefine2DISCOVARDovetail_13228;NumExactMatchSVs=4;ClusterMaxShiftDist=0.114478;ClusterMaxSizeDiff=0.114478;ClusterMaxEditDist=0.253333;PBcalls=9;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=141;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=136;REFWIDENED=20:54406608-54406743;PctSeqSimilarity=0.9857;PctSizeSimilarity=1;PctRecOverlap=0.5177;SizeDiff=0;StartDistance=68;EndDistance=68;GTMatch=0;TruScore=83;MatchId=3222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:47:./.:0:3:0:3:./.:2:7:1:9:./.:4:33:./.:.:.:.:.:.
chr20	54491109	HG2_PB_SVrefine2PB10Xhap12_13713	G	GCAAAACAAGCTATAGTTCATCTGTACCTCATTTTTTAAAATGGTCAGGTTCAAAGCTGCTATGCAATACTGGGGCGCAACTAAGTATCATTGAAATGATTTGTCTTTTTTTATTTTGAGTCAACCTGAAGTGACAATATTTTAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4910:HG2_PB_pbsv_18738:HG4_PB_pbsv_18679:HG3_PB_pbsv_18422:HG3_PB_assemblyticsfalcon_15654:HG4_Ill_svaba_22847:HG4_Ill_manta_4216:HG4_Ill_SVrefine2DISCOVARDovetail_13042:HG4_Ill_MetaSV_3028:HG4_Ill_GATKHCSBGrefine_12638:HG4_Ill_Cortex_2113:HG3_PB_SVrefine2PBcRDovetail_9176:HG3_PB_SVrefine2Falcon1Dovetail_11648:HG3_Ill_svaba_23122:HG3_Ill_manta_4043:HG3_Ill_Spiral_18876:HG3_Ill_SVrefine2DISCOVARDovetail_13231:HG3_Ill_MetaSV_3070:HG3_Ill_GATKHCSBGrefine_12083:HG3_Ill_Cortex_2153:HG3_Ill_250bpfermikitraw_23729:HG3_Ill_150bpfermikitraw_23043:HG2_PB_SVrefine2PBcRplusDovetail_6539:HG2_PB_SVrefine2PB10Xhap12_13713:HG2_PB_SVrefine2Falcon2Bionano_9259:HG2_PB_SVrefine2Falcon1plusDovetail_7051:HG2_Ill_svaba_22900:HG2_Ill_manta_4956:HG2_Ill_SpiralSDKrefine_9932:HG2_Ill_SVrefine2DISCOVARplusDovetail_7659:HG2_Ill_MetaSV_2927:HG2_Ill_GATKHCSBGrefine_12233:HG2_Ill_Cortex_4956:HG2_Ill_250bpfermikitraw_24429:HG2_Ill_150bpfermikitraw_23007:HG2_10X_SVrefine210Xhap12_13103:HG2_PB_HySA_33935:HG2_PB_PB10Xdip_18464;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13103:HG2_Ill_150bpfermikitraw_23007:HG2_Ill_250bpfermikitraw_24429:HG2_Ill_Cortex_4956:HG2_Ill_GATKHCSBGrefine_12233:HG2_Ill_MetaSV_2927:HG2_Ill_SVrefine2DISCOVARplusDovetail_7659:HG2_Ill_SpiralSDKrefine_9932:HG2_Ill_manta_4956:HG2_Ill_svaba_22900:HG2_PB_SVrefine2Falcon1plusDovetail_7051:HG2_PB_SVrefine2Falcon2Bionano_9259:HG2_PB_SVrefine2PB10Xhap12_13713:HG2_PB_SVrefine2PBcRplusDovetail_6539:HG3_Ill_150bpfermikitraw_23043:HG3_Ill_250bpfermikitraw_23729:HG3_Ill_Cortex_2153:HG3_Ill_GATKHCSBGrefine_12083:HG3_Ill_MetaSV_3070:HG3_Ill_SVrefine2DISCOVARDovetail_13231:HG3_Ill_Spiral_18876:HG3_Ill_manta_4043:HG3_Ill_svaba_23122:HG3_PB_SVrefine2Falcon1Dovetail_11648:HG3_PB_SVrefine2PBcRDovetail_9176:HG4_Ill_Cortex_2113:HG4_Ill_GATKHCSBGrefine_12638:HG4_Ill_MetaSV_3028:HG4_Ill_SVrefine2DISCOVARDovetail_13042:HG4_Ill_manta_4216:HG4_Ill_svaba_22847;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0544218;ClusterMaxSizeDiff=0.047619;ClusterMaxEditDist=0.148148;PBcalls=12;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=144;DistBack=40;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=20:54491110-54491111;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:80:1/1:1:23:1:33:1/1:0:36:0:17:1/1:0:23:./.:.:.:.:.:.
chr20	54859348	HG2_Ill_SVrefine2DISCOVARplusDovetail_7661	T	TATATATATATGAAATATATATGAAATATACATATGAAATATATATGAAATATACATATGAAATATATATTAAATACACATATATAAAATATATATTAAATATACATATATTAAATGTACATATATGAAATATACATGAAATATATATATGAAATATACATGAAATATATATGTGAAATGAAATATATATGAAATATACATGTGAAATATGTATGAAATATACATATGAAATATATATATGAAATATACACATATGAAATATATATGAAATATACGTATATGAAATACATATGAAATATACATATATGAAATACATATGAAATATACATATATGAAATATATATATGAAATATACGTATATGAAATATATATATGAAACATGATATATATGAAATATATATATGAAACATGATATATACGATACATGTATGAAACATGATATATACGATACATATATGAATCATGATATATACGATATACACATGAAACATGATATATATACATGAAACATGATATATATGAAACATATATATGAAACATGATATATATGAAACATGATATATACGAAACATGATATATATGAAACGTGATATATATGAAACATGATCTATATGAAACATATATACGAAACATGATATATATGAAACATATATACGAAACATGATATATATGATATATATATGAAACATGATATATATTGTATAAATGAAATATGATACATATTGTATATGAAACATGATATATGAAACATATATGAAACATGATATATATGACATATATGAAACATGATATATATTACATATGAAATATGATATATATGATATATATGAAATATGATATATATGATATATATGAAATATGATATACATGATATATATGAAATATGATATACATGATATATATGAAATATGATATATATGATATATCTATGTAATATGATATATATGATATATCTATGCAATATGATATATATGATATATATAAGAAATATGATATATATGAAATATGATATATATGATATATATGTGAAATATATATATGAAATATGATATATATGATATATAGGAAATATATATATCATACATATGAAATATACATTATATATGATATATATGAAATATATATGATATATATGACATATATATGAAATATATATGATATATATGACATATACATGAAATATATATGATATATATGACATATACATGAAATATATATATGAAATACGTATGAAATATATACATGAAATATATGTATAAAATACGTATGAAATACATATATGAAATATATATGACATATATGAAATATACATGAAATATATATGACATATATGACATGTACATGAAATATATATGACATGTACATGACATATATGTGACATATATACATGACATATACATGACATATACATATGAGATATATATGAGATATACATATGAGATATATATATGAGATATACATATGAGATATGAGATATACATATGAGATACATATGAGATATATGAGATATACATATGAGATATATATGAGATATATGAGATATACATATGAGATATATATGAGATATATTTGAGATATATATGATATATATGAGATATGAGATATATATTATATATGAGTTATATATGAGATATATATGATATATATGAGATATATATGAGATACATATGATATATATGAGATATATATGATATATGAGATATATATGATATATATGAGATATATATGAGATATATGCTATATATGAGAGATATATGCTATAGAGATGAGAGATATATGCTATAGATATGAGAGATATATGCTATAGATTTGAGAGATATATGCTATATATTTGAAATATATATATGCTATATATTTGAAATATATATATGCTATATATTTGAAATATATATATGCTATATATTTGAAATATATATATGCTATATATTTGAAATATATATGATATATATGATATATTTGATATATATATGAAATTATATATATCATATATATGAAATATATATGATATACATGAAATATATATGATGTATCATATATGAAATATATATGATATATACATATATGAAATATATATATGATATGTATATATGAAATATATATGATATGTATATATGAAATGTATATGAAATGTATATATGAAATGTATATGAAATGTATATATGAAATATACATGAAATGTATATATGAAATATACATGAGATATATACATGAAATATACATGAGATATATACATGAAATATACATGAGATATATACATGAAATATACATGAGATATATACATGAAATATACATGAGATATATACATGAAATATACATGAGATATATACATGAAATATACATGAGAAATATACATGAAATATACATATGAGATATATACATGAAATATACATATGAGATATATACATGAAATATACATATGAGATATATACATGAAATATACATATGAGATATATACATGAAATATACATATGAGATATATACATGAAATATACATATGAGATATATACATGAAATATACATATGATATATACATGAAATATACATATGAGATATATACATGAAATATACATATGAGATATATACATGAA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11666:HG4_PB_pbsv_18682:HG2_PB_pbsv_18744:HG2_PB_assemblyticsPBcR_15299:HG4_PB_assemblyticsfalcon_15423:HG2_PB_SVrefine2Falcon1plusDovetail_7054:HG2_PB_SVrefine2PBcRplusDovetail_6543:HG4_PB_SVrefine2Falcon1Dovetail_11668:HG2_PB_SVrefine2PB10Xhap12_13716:HG4_PB_HySA_27052:HG3_PB_pbsv_18426:HG4_PB_assemblyticsfalcon_15422:HG3_PB_assemblyticsfalcon_15660:HG3_PB_SVrefine2Falcon1Dovetail_11650:HG4_PB_SVrefine2Falcon1Dovetail_11667:HG3_PB_SVrefine2PBcRDovetail_9179:HG3_Ill_SVrefine2DISCOVARDovetail_13237:HG2_PB_SVrefine2PBcRplusDovetail_6542:HG2_PB_SVrefine2Falcon1plusDovetail_7053:HG2_PB_SVrefine2Falcon2Bionano_9260:HG4_PB_SVrefine2PBcRDovetail_9446:HG4_Ill_SVrefine2DISCOVARDovetail_13043:HG2_Ill_SVrefine2DISCOVARplusDovetail_7661:HG2_10X_SVrefine210Xhap12_13107:HG4_PB_assemblyticsfalcon_15421;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7661:HG4_Ill_SVrefine2DISCOVARDovetail_13043:HG4_PB_SVrefine2PBcRDovetail_9446;NumExactMatchSVs=3;ClusterMaxShiftDist=0.111492;ClusterMaxSizeDiff=0.111492;ClusterMaxEditDist=0.204679;PBcalls=21;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=2587;DistBack=2353;DistForward=60;DistMin=60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=69;REFWIDENED=20:54859349-54859417;PctSeqSimilarity=0.997;PctSizeSimilarity=0.995;PctRecOverlap=0.9715;SizeDiff=-13;StartDistance=-67;EndDistance=-67;GTMatch=1;TruScore=98;MatchId=3224.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:119:1/1:2:30:0:35:1/1:0:10:0:8:1/1:0:38:1/1:3:354:.:3246:.
chr20	54963149	HG2_PB_SVrefine2Falcon1plusDovetail_7055	C	CGACAAGACCAACCTCCATGTGGGTTTATAAATGTGAATGAGATTACAGATTATTCAATTTA	20	PASS	ClusterIDs=HG3_PB_HySA_27983:HG2_PB_HySA_33945:HG2_PB_pbsv_18746:HG4_PB_SVrefine2PBcRDovetail_9448:HG3_PB_pbsv_18428:HG4_PB_SVrefine2Falcon1Dovetail_11669:HG4_PB_pbsv_18684:HG4_Ill_svaba_22853:HG4_Ill_manta_4219:HG4_Ill_SVrefine2DISCOVARDovetail_13045:HG4_Ill_Krunchall_25093:HG4_Ill_GATKHC_29356:HG4_Ill_GATKHCSBGrefine_12641:HG4_Ill_250bpfermikitraw_24058:HG4_Ill_150bpfermikitraw_23149:HG3_PB_SVrefine2PBcRDovetail_9181:HG3_PB_SVrefine2Falcon1Dovetail_11651:HG3_Ill_svaba_23128:HG3_Ill_scalpel_17680:HG3_Ill_manta_4044:HG3_Ill_SVrefine2DISCOVARDovetail_13239:HG3_Ill_Krunchall_24319:HG3_Ill_GATKHC_29285:HG3_Ill_GATKHCSBGrefine_12086:HG3_Ill_250bpfermikitraw_23739:HG3_Ill_150bpfermikitraw_23049:HG2_PB_SVrefine2PBcRplusDovetail_6545:HG2_PB_SVrefine2PB10Xhap12_13718:HG2_PB_SVrefine2Falcon2Bionano_9262:HG2_PB_SVrefine2Falcon1plusDovetail_7055:HG2_Ill_svaba_22906:HG2_Ill_scalpel_17340:HG2_Ill_manta_4959:HG2_Ill_SVrefine2DISCOVARplusDovetail_7663:HG2_Ill_Krunchall_24791:HG2_Ill_GATKHC_29388:HG2_Ill_GATKHCSBGrefine_12235:HG2_Ill_250bpfermikitraw_24437:HG2_Ill_150bpfermikitraw_23016:HG2_10X_SVrefine210Xhap12_13109:HG2_PB_PB10Xdip_18469;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13109:HG2_Ill_150bpfermikitraw_23016:HG2_Ill_250bpfermikitraw_24437:HG2_Ill_GATKHCSBGrefine_12235:HG2_Ill_GATKHC_29388:HG2_Ill_Krunchall_24791:HG2_Ill_SVrefine2DISCOVARplusDovetail_7663:HG2_Ill_manta_4959:HG2_Ill_scalpel_17340:HG2_Ill_svaba_22906:HG2_PB_SVrefine2Falcon1plusDovetail_7055:HG2_PB_SVrefine2Falcon2Bionano_9262:HG2_PB_SVrefine2PB10Xhap12_13718:HG2_PB_SVrefine2PBcRplusDovetail_6545:HG3_Ill_150bpfermikitraw_23049:HG3_Ill_250bpfermikitraw_23739:HG3_Ill_GATKHCSBGrefine_12086:HG3_Ill_GATKHC_29285:HG3_Ill_Krunchall_24319:HG3_Ill_SVrefine2DISCOVARDovetail_13239:HG3_Ill_manta_4044:HG3_Ill_scalpel_17680:HG3_Ill_svaba_23128:HG3_PB_SVrefine2Falcon1Dovetail_11651:HG3_PB_SVrefine2PBcRDovetail_9181:HG4_Ill_150bpfermikitraw_23149:HG4_Ill_250bpfermikitraw_24058:HG4_Ill_GATKHCSBGrefine_12641:HG4_Ill_GATKHC_29356:HG4_Ill_Krunchall_25093:HG4_Ill_SVrefine2DISCOVARDovetail_13045:HG4_Ill_manta_4219:HG4_Ill_svaba_22853:HG4_PB_SVrefine2Falcon1Dovetail_11669:HG4_PB_SVrefine2PBcRDovetail_9448;NumExactMatchSVs=35;ClusterMaxShiftDist=0.125984;ClusterMaxSizeDiff=0.0787402;ClusterMaxEditDist=0.325581;PBcalls=14;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=61;DistBack=22089;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=61;REFWIDENED=20:54963150-54963210;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:2:19:0:10:./.:1:18:2:16:1/1:0:57:./.:.:.:.:.:.
chr20	55666240	HG3_PB_SVrefine2PBcRDovetail_9183	A	CCACACACACCTCCACCCGCACACACCTCCACCACCACACACACCTCCACCCACACACACCACCCATGCACACACCTCCACCCACACACACACACACCTCCACCCACACACACCTCCACCCACACACACCTCCACCCACACACACACACCTCCACCCACC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11672:HG4_PB_assemblyticsfalcon_15429:HG3_PB_SVrefine2PBcRDovetail_9183:HG2_PB_SVrefine2Falcon1plusDovetail_7058;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_9183;NumExactMatchSVs=1;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.0696203;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=159;DistBack=-1;DistForward=88;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=534;REFWIDENED=20:55665797-55666330;PctSeqSimilarity=0.9414;PctSizeSimilarity=0.9371;PctRecOverlap=0.4403;SizeDiff=10;StartDistance=84;EndDistance=84;GTMatch=0;TruScore=77;MatchId=3226.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:0|1:27:6:4:16:./.:79:559:37:72:0/1:7:2:./.:.:.:.:.:.
chr20	56236996	HG3_Ill_GATKHCSBGrefine_12090	T	TGTCTACACTGCTATTGAGCCAGTGTTTCTCAGCTGGGGCCGCGTCTGCACCCAGGGCTCAGCACGCCACC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24444:HG4_PB_pbsv_18693:HG4_Ill_scalpel_16938:HG2_PB_pbsv_18755:HG4_Ill_GATKHC_29365:HG4_Ill_GATKHCSBGrefine_12645:HG3_Ill_scalpel_17686:HG3_Ill_GATKHC_29292:HG3_Ill_GATKHCSBGrefine_12090:HG3_Ill_250bpfermikitraw_23748:HG2_Ill_scalpel_17346:HG2_Ill_GATKHC_29396:HG2_Ill_GATKHCSBGrefine_12239;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24444:HG4_Ill_scalpel_16938:HG4_Ill_GATKHC_29365:HG4_Ill_GATKHCSBGrefine_12645:HG3_Ill_scalpel_17686:HG3_Ill_GATKHC_29292:HG3_Ill_GATKHCSBGrefine_12090:HG3_Ill_250bpfermikitraw_23748:HG2_Ill_scalpel_17346:HG2_Ill_GATKHC_29396:HG2_Ill_GATKHCSBGrefine_12239;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0680272;ClusterMaxEditDist=0.322148;PBcalls=2;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=1327;DistForward=55;DistMin=55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=210;REFWIDENED=20:56236983-56237192;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:27:./.:13:11:13:14:0|1:10:0:0:10:0/1:18:10:./.:.:.:.:.:.
chr20	56549882	HG2_PB_SVrefine2PBcRplusDovetail_6550	T	TCTATTATCACCATCACCAAGACCATCACCACCAACCATCACCACCATAATCATGACAACTACCAGCATCATCACCATCACCACTATCATTACTATCACCACCACCATCACCATCACCACCACCATCATTACCACATCACTACCACCACCATTACCATCACTACAACCACTACCACCATCACCACTATCATTACTATCATCACCACCAACACGACCACCACCATCATCATCATTACCACCATCACTACCACCACTACCACCATCACCACCATCACCAAGACCATCACCACCAACCATCACCACCATAATCATGACAACTACCATCATCATCACCATCACCACTACCATTACTATCATCAACACCATCACCATCACCACCATCAGCATTACCACCATCACCACCATCACTACCACCACTACCACCATCACCACCATCACTACCACCATCACCATCACTACCACCACTACCACCATCACCACCATCACTACCACCATCACCACCATCACTACCACCATCACCACCATCACTACCACCATCATCACCATCACTACCACCACTACCACCATCACCACCATAATGACCATCATCACATCATCACATCACCACCACCACCACTACCACCACTACCACCATCAATACCACCATCATCACCACCATCACTACCACCACTACCACCATCACAACTATTATTGCTATCATCACTACCATCACCACTACCACCACCATCACTAACACCATCACCACCACCCAACCACCATCACCACCATCATCACTATCACCACCACCATCACTAACACCATCACCACCACCCAACCACCATCACCACCATCATCACTATCACCACCACCACCACCACCACCATCATCATCACCACTGTCACCACCATCACCATCACCACCATTACCACCATCACTACCACCATTACCACCATCACCACTATCATTACTATCATCACTACCATCACCACTACCACCACCATCACTATCACCATTACCACCACCACTACCACCATCACCACCATAATCACTATCATCACCACCAACACCATCACCACCACCATCATCACCACTATCACCACCACCACCAACACCACCATCACCACCATTACCACCATCACTACAACCACTACCACCATCACCA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11657:HG4_PB_HySA_27062:HG2_PB_HySA_33963:HG2_PB_PB10Xdip_18472:HG3_PB_pbsv_18444:HG4_PB_SVrefine2Falcon1Dovetail_11675:HG3_PB_SVrefine2PBcRDovetail_9186:HG2_PB_SVrefine2PBcRplusDovetail_6550:HG2_PB_SVrefine2Falcon2Bionano_9268:HG4_PB_SVrefine2PBcRDovetail_9452:HG2_PB_SVrefine2PB10Xhap12_13722:HG2_PB_SVrefine2Falcon1plusDovetail_7060;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9268:HG2_PB_SVrefine2PBcRplusDovetail_6550:HG3_PB_SVrefine2PBcRDovetail_9186:HG4_PB_SVrefine2Falcon1Dovetail_11675;NumExactMatchSVs=4;ClusterMaxShiftDist=0.046332;ClusterMaxSizeDiff=0.042042;ClusterMaxEditDist=0.164072;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1140;DistBack=9084;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=240;REFWIDENED=20:56549883-56550122;PctSeqSimilarity=0.9934;PctSizeSimilarity=0.9956;PctRecOverlap=0.9404;SizeDiff=5;StartDistance=-65;EndDistance=-65;GTMatch=0;TruScore=97;MatchId=3228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:24:0:14:./.:2:39:1:43:1/1:0:16:1/1:8:309:.:1255:.
chr20	56771789	HG2_PB_SVrefine2Falcon1plusDovetail_7061	C	CACACACAGACACACACAAACACACACAGACACACACACACAGACACACACACACAGACACACAGACACACACAGACACACACACACAGACACACAGACACACACACACAGACACACACAGACACACACACACAGACACACAGACACACACAGACAGACACAGACAGACACACACAGACACACACAGACACACACACACAGACACACACACACACAGACACACACAGACACACAGACACACAGACACACACACAGACACACAGACACACACACAGACACACACACAGACACACAGACACACACAGACACACAGACACACACAGACACACACACAGACACACAGACACACACACAGACACACACACAGACACACACAGACACACAGACACACACACACAGACACACACACAGACACAGACACACACACAGACACACACAGAGACACACACAGACACACACAGACACACACACAGACACACACAGACACAGACACACACACAGACACACAGACACACACAGACACAGACACACACAGACACACACAGACACACACACACACAGACACACAGACACACACAGACACAGACACACAGAAACACACACAGACACACACAGACACACAGACACACAGACACGCACACAGACACAGACACACACACAGACACACACACACAGACACACACACAGACACACACAGACACACACACAGACACACAGACACACACACAGACACACACACACACAGACACACACACAGACACACACAGACACACACACAGACACACACAGACACACACACACAGACACACACAGACACACACACACACACAGACACACAGACACACACACAGACACACACACACAGACACAGACACACACACAGACACACAAACACACACAGACACACACACACACAGACACACACACAGACACACAGACACACACAGACACAGACACACACACAGACACACACAGACACAGACACACACACACACAGACACACACAGACACACAGACACACAGACACACACAGACACACACAGACACACACAGACACAGACACACACACAGACACAGACACACAGACACACACACAGACACACACACAGACACACACAGACACACACACACAGACACACACACAGACACACACACAGAGACACACACACAGACACACACAGACACACACACAGACACACACAGACACACACACAGACACACACACACAGACACACACACACAGACACACAGACACACACAGACACACACAGACACACACACACACAGACACACACAGACACACACAGACACACACACACAGACACAGACACACACAGACACACACACACACAGACACACACAGACACACAGACACACAGACACACAGACACACACAGACACACACAGACACACACACACAGACACACACAGACACACAGACACACACACAGACACACACAGACAGACACACAGACACACACAGACACAGACACACAGACACACACAGACACACACACAGACACACACACACAGACACACAGACACACACAGACACACACACAGACACACACACACAGACACACACACACAGACACACACACAGACACACACAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9187:HG3_PB_pbsv_18445:HG2_PB_pbsv_18761:HG2_PB_HySA_33965:HG2_PB_SVrefine2Falcon1plusDovetail_7061:HG3_PB_assemblyticsfalcon_15677:HG4_PB_assemblyticsfalcon_15446:HG4_PB_SVrefine2Falcon1Dovetail_11676:HG3_PB_SVrefine2Falcon1Dovetail_11658:HG2_PB_SVrefine2PB10Xhap12_13723:HG2_PB_SVrefine2Falcon2Bionano_9269:HG4_PB_pbsv_18698:HG4_PB_SVrefine2PBcRDovetail_9454:HG2_PB_SVrefine2PBcRplusDovetail_6551;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7061;NumExactMatchSVs=1;ClusterMaxShiftDist=0.321839;ClusterMaxSizeDiff=0.321839;ClusterMaxEditDist=0.331159;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1612;DistBack=-172;DistForward=95;DistMin=-172;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=173;REFWIDENED=20:56771790-56771962;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9902;PctRecOverlap=0.9325;SizeDiff=-16;StartDistance=-102;EndDistance=-102;GTMatch=1;TruScore=97;MatchId=3229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:1/1:0:20:0:18:./.:19:127:26:126:1/1:0:14:1/1:11:342:.:1674:.
chr20	56884509	HG2_PB_SVrefine2Falcon2Bionano_9270	G	GCAGGGGCGGGGCCCTGCAGACAGGGGCGGGGCCCTGCAGACAGGGGCGGGGCCCTGCAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9270:HG2_PB_pbsv_18762:HG2_PB_PB10Xdip_18477:HG3_PB_pbsv_18446:HG2_PB_SVrefine2PB10Xhap12_13724;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9270:HG2_PB_SVrefine2PB10Xhap12_13724;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.278689;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=60;DistBack=59668;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=173;REFWIDENED=20:56884510-56884682;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:26:./.:1:0:1:5:./.:2:0:2:0:0/1:24:8:./.:.:.:.:.:.
chr20	57095166	HG2_PB_SVrefine2PB10Xhap12_13725	A	ATGGATGGATGGATGGATGAATAGATGAATGGGTGGATGGGTGGGTAGGTGGGTGGATGAGTGGATGGGTGGTAAGTGGGTGAATGGGTTAATGGGTGGATGAGTGGGGGGATGGATGGATAGATGGATGAATGGGTGAATGGGTGGGTGGATGGATAGATGGATGGATGAGTGAGTGGGTGAATGGAAGGGTAGGAGGATGGGTAGGTGGATGGGAGTGAGATGGATGGGTGGACGGATGGATAGATGGATGGATGAGTGGATGAGTGGGTGGATGGGTGGATGAATGGGTGGATGGGTCAGTAGGTGGATGAGCTGGTGGATTAATGGGTGGATGAGTGGGTGGGTAAATGGATAGATGGATAAATGGGTGAGTAGGTAGGTGAGTTAATGAGGGGATGATTGATTGAATGGGTGAGTAAATGGGTGGCTGGGTGGATGGGTGGGCAGATGGGTGGATGAGTGAGTGGGTAGGTGGGTGGATAGGTGGGTGGGTTAATGACTGAGTGAATGGATAGGTAGATCAGGGAGGGAGTGAGTGAGTGGGTGGGTGGATGGTTGGGTGGGTGGTTGGATAGGTGAATGGGTGAGTGGATGCATAGGTGATGGATGGGTAGGTGGGTGGGCTAATGGGTGGGTGTGTGAGTGGGTGAGTGTATGGGTGGGTGGGTGGGTGGATAGACGGGAGGGTGGATAGGTGTGTGGGTGGGCAGGTGGGTGGGTGGATAAGTGGGAGGGTGGATAGGTGGGTGGGTGGATAGGTGGGTGGGTGGGTGGGTGTATGGATAGGTGAATGGGTGAGTGGATGGATAGGTGACGGATGGGTAGGTGGGTGGGCTCATGAGTGGATGGGTGTGCAAGAAGGTTAGCGTATGGGTGGGTGGATAGATGGGAGGGTAGATAGGTGTGTGGGTGGATAGGTGGGAAGGTGGATGGGTGGGTGGATAGGTGGGTGGGTGGATAGGTGGGAGGGTGGATAGGCGGGAGGGTGGATAGGCGGGTGGGTGGATAGGCAGGTGGGTGGGTGGGTGGATGGATAGGTGAATGGGTGAGTGGATAGATAGGTGATGGATGGGTAGGTGGGTGGGCTAATGAGTGGATGGGTGTGTGAGATGGTGAGTATATGGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13725:HG2_PB_pbsv_18763:HG3_PB_pbsv_18447:HG4_PB_pbsv_18702:HG4_PB_HySA_27066:HG2_Ill_breakscan11_4912:HG2_PB_PB10Xdip_18478:HG4_PB_assemblyticsfalcon_15449:HG4_PB_SVrefine2Falcon1Dovetail_11677:HG4_PB_SVrefine2PBcRDovetail_9456:HG3_PB_SVrefine2Falcon1Dovetail_11659:HG3_PB_SVrefine2PBcRDovetail_9188:HG2_PB_SVrefine2Falcon2Bionano_9271:HG2_PB_SVrefine2Falcon1plusDovetail_7062:HG2_PB_SVrefine2PBcRplusDovetail_6552;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13725:HG2_PB_SVrefine2PBcRplusDovetail_6552;NumExactMatchSVs=2;ClusterMaxShiftDist=0.126269;ClusterMaxSizeDiff=0.126269;ClusterMaxEditDist=0.20381;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=1127;DistBack=47;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=218;REFWIDENED=20:57095167-57095384;PctSeqSimilarity=0.9793;PctSizeSimilarity=0.9886;PctRecOverlap=0.8256;SizeDiff=-13;StartDistance=-192;EndDistance=-192;GTMatch=0;TruScore=93;MatchId=3231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:1:20:1:31:./.:11:179:14:156:./.:0:4:0/1:14:90:.:1062:.
chr20	57270061	HG3_PB_SVrefine2PBcRDovetail_9189	C	CATGTGTGATGTGTGTTGCGTGTGTATGAGTGCTGGTGTGTGCATGAATGGTGTGTGTGGTGTGTTTATGTGTGGTGTGTGTTGCTGTGTGAGTGCTGGTGTGTGCATGAGTGGCGTGTGTGTGGTGTGTGTTGCTGTGTGTGTATGAGTGTTGGTGTGTGCATGAGTGGTGTGTGTGTGCTGTGTGTATGTGTGGTGTGTGTTGCTGTGTATGAGTGTTGGTGTGTGCATGAGTGGTGTGTGTGTGCTGTGTGTACGTGTGTGTGTTGCTGTGTGTGTGTTTGAGTGCTGGTGTGTGCATGAGTGGTGTGTGTGTGGTGTGTGTGGTGTCTGTTGCTGTGTGTGTTTGAGTTCTGGTATGTGCATGAGTGGTGTGTGTGTGTGTGTGTGGTGTGTTGCTGTGTGTGTATGAGTGCTGGTGTGTGCACGAGTGGTGTGTGTATTTGCGGTGTGTGTTGCTGTGTATATGTGAGTGCTGGTGTGTGCATGAGTGGCGTGTGTGGTGTGTATGTGTGGTGTGTGTTGCTGTTTGTGTTTGAGTGCTG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11678:HG2_PB_PB10Xdip_18479:HG4_Ill_manta_4220:HG3_Ill_MetaSV_3072:HG4_Ill_GATKHCSBGrefine_12651:HG4_Ill_MetaSV_3031:HG2_Ill_GATKHCSBGrefine_12241:HG3_PB_HySA_28002:HG2_PB_HySA_33972:HG2_Ill_breakscan11_4913:HG4_PB_pbsv_18705:HG2_PB_pbsv_18765:HG3_PB_pbsv_18449:HG2_PB_SVrefine2Falcon1plusDovetail_7063:HG3_PB_SVrefine2Falcon1Dovetail_11660:HG4_Ill_SVrefine2DISCOVARDovetail_13058:HG3_PB_SVrefine2PBcRDovetail_9189:HG3_Ill_SVrefine2DISCOVARDovetail_13251:HG2_PB_SVrefine2Falcon2Bionano_9272:HG2_Ill_SVrefine2DISCOVARplusDovetail_7674:HG4_PB_SVrefine2PBcRDovetail_9458:HG2_PB_SVrefine2PBcRplusDovetail_6554:HG2_PB_SVrefine2PB10Xhap12_13727;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7674:HG2_PB_SVrefine2Falcon2Bionano_9272:HG3_Ill_SVrefine2DISCOVARDovetail_13251:HG3_PB_SVrefine2PBcRDovetail_9189:HG4_Ill_SVrefine2DISCOVARDovetail_13058;NumExactMatchSVs=5;ClusterMaxShiftDist=0.129088;ClusterMaxSizeDiff=0.127367;ClusterMaxEditDist=0.205638;PBcalls=14;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=544;DistBack=6311;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=349;REFWIDENED=20:57270062-57270410;PctSeqSimilarity=0.9964;PctSizeSimilarity=0.9945;PctRecOverlap=0.9744;SizeDiff=-3;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=98;MatchId=3232.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:62:1/1:2:27:0:14:1/1:11:505:5:440:1/1:0:11:1/1:1:170:.:1120:.
chr20	57405235	HG2_PB_SVrefine2PB10Xhap12_13728	A	AACCACCACCACCACATCACCATCATCACCACCACCACCACACCACCATCACCACAATCACCACCACCACCATCACCGCCACACCATCACCACCACCGCCACACCACCATCACCACCACCATCACCACCACCACCACACCATCATCATCACCACCACCATCACCACCACACCACCATCACCACCACCACAACACCATCACCACAATCACCACCACCATCACTGCCACACCACCATCACCACCACCGCCACACCACCATCATTACCACCACCACCATCACCACCACCACACCACCATCATCACCATCACCACCATCACCACCACACCACCATCATCACCACCACACCACCATCATCACCACCGCCACACCACCGCCACACCACCATCATCACCACCACTACACCACCATCACCACAATCACCACCACCACCATCACCGCCACACCACCATCACCACCACTGCCACACCACCATCACCACCACCACACCACCATCACCACACCACCATCATCACCACCACACCACCATCATCACCACCACACCACAATCACCACCACCACCGTCACCACACCACCGTC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11661:HG2_PB_HySA_33973:HG2_PB_pbsv_18767:HG2_PB_PB10Xdip_18480:HG4_PB_pbsv_18707:HG3_PB_SVrefine2PBcRDovetail_9190:HG3_PB_pbsv_18451:HG2_PB_SVrefine2PBcRplusDovetail_6555:HG2_PB_SVrefine2PB10Xhap12_13728:HG2_PB_SVrefine2Falcon2Bionano_9273:HG2_PB_SVrefine2Falcon1plusDovetail_7064:HG4_PB_SVrefine2Falcon1Dovetail_11679:HG4_PB_SVrefine2PBcRDovetail_9459;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7064:HG2_PB_SVrefine2Falcon2Bionano_9273:HG2_PB_SVrefine2PB10Xhap12_13728:HG2_PB_SVrefine2PBcRplusDovetail_6555:HG3_PB_SVrefine2PBcRDovetail_9190;NumExactMatchSVs=5;ClusterMaxShiftDist=0.116738;ClusterMaxSizeDiff=0.115021;ClusterMaxEditDist=0.243945;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=575;DistBack=-563;DistForward=17060;DistMin=-563;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=466;REFWIDENED=20:57405236-57405701;PctSeqSimilarity=0.97;PctSizeSimilarity=0.9812;PctRecOverlap=0.3901;SizeDiff=-11;StartDistance=-352;EndDistance=-352;GTMatch=0;TruScore=78;MatchId=3233.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:0:11:0:29:1/1:8:257:9:343:./.:0:3:1/1:0:99:.:.:.
chr20	57708323	HG3_PB_assemblyticsfalcon_15686	A	GTAGGATCACTTTGGGCAGTTGCTATGCTCTGGTCCTGCATGACGTCCGTAGGATCACTTTGGGCAGTTGCTATGCTCTGGTCCTGCATGACGTCCGTAGGATCACTTCTTTGGGCAGTTGCTATGCTCTGGTCCTGCATGACGTCCGTAGGATCACTTTGGGCAGTTGCTATGCTCTGGTCCTGCATGACGTCCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9274:HG3_PB_pbsv_18452:HG4_PB_assemblyticsfalcon_15455:HG2_PB_pbsv_18768:HG4_PB_SVrefine2Falcon1Dovetail_11680:HG3_PB_assemblyticsfalcon_15686:HG3_PB_SVrefine2Falcon1Dovetail_11662:HG2_PB_assemblyticsfalcon_15739:HG2_PB_SVrefine2PBcRplusDovetail_6556:HG2_PB_SVrefine2PB10Xhap12_13729:HG2_PB_SVrefine2Falcon1plusDovetail_7065:HG2_PB_PB10Xdip_18481:HG4_PB_HySA_27069:HG3_PB_HySA_28004:HG2_PB_HySA_33974:HG4_Ill_SVrefine2DISCOVARDovetail_13059;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7065:HG2_PB_SVrefine2PB10Xhap12_13729:HG2_PB_SVrefine2PBcRplusDovetail_6556:HG2_PB_assemblyticsfalcon_15739:HG3_PB_SVrefine2Falcon1Dovetail_11662:HG3_PB_assemblyticsfalcon_15686:HG4_PB_SVrefine2Falcon1Dovetail_11680:HG4_PB_assemblyticsfalcon_15455;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0651629;ClusterMaxEditDist=0.215159;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=195;DistBack=-1;DistForward=15439;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=434;REFWIDENED=20:57708014-57708447;PctSeqSimilarity=0.9977;PctSizeSimilarity=1;PctRecOverlap=0.9077;SizeDiff=0;StartDistance=18;EndDistance=18;GTMatch=0;TruScore=96;MatchId=3234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:76:./.:0:0:0:0:./.:1:3:0:2:./.:1:7:./.:.:.:.:.:.
chr20	58874630	HG4_Ill_250bpfermikitraw_24085	C	CACCTGGAGAGAGGAAGAGGTTTCCATTGACCTGGAGAGAGGAAGAGGTTTCCATTG	20	PASS	ClusterIDs=HG2_PB_HySA_33988:HG4_PB_HySA_27081:HG4_PB_pbsv_18714:HG4_PB_SVrefine2PBcRDovetail_9464:HG2_PB_pbsv_18775:HG4_Ill_svaba_22880:HG4_Ill_Krunchall_25121:HG4_Ill_GATKHCSBGrefine_12652:HG4_Ill_250bpfermikitraw_24085:HG2_PB_assemblyticsfalcon_15752:HG2_PB_SVrefine2Falcon2Bionano_9278:HG2_Ill_svaba_22939:HG2_Ill_SVrefine2DISCOVARplusDovetail_7680:HG2_Ill_Krunchall_24811:HG2_Ill_GATKHCSBGrefine_12244:HG2_Ill_250bpfermikitraw_24459:HG2_Ill_150bpfermikitraw_23042;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23042:HG2_Ill_250bpfermikitraw_24459:HG2_Ill_GATKHCSBGrefine_12244:HG2_Ill_Krunchall_24811:HG2_Ill_SVrefine2DISCOVARplusDovetail_7680:HG2_Ill_svaba_22939:HG2_PB_SVrefine2Falcon2Bionano_9278:HG2_PB_assemblyticsfalcon_15752:HG4_Ill_250bpfermikitraw_24085:HG4_Ill_GATKHCSBGrefine_12652:HG4_Ill_Krunchall_25121:HG4_Ill_svaba_22880:HG4_PB_SVrefine2PBcRDovetail_9464;NumExactMatchSVs=13;ClusterMaxShiftDist=0.214286;ClusterMaxSizeDiff=0.178571;ClusterMaxEditDist=0.267857;PBcalls=7;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=56;DistBack=-1;DistForward=3432;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=56;REFWIDENED=20:58874631-58874686;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3236.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:24:0|1:38:1:0:22:0|1:11:0:0:17:0/1:16:23:./.:.:.:.:.:.
chr20	59014066	HG2_10X_SVrefine210Xhap12_13136	T	TTAATCCAAATTATTGCAAGTATCATTCGTTCATTCCTTTTTTTATTTCGAGTAGTATCCCCACAGCATGAATGTGC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13136:HG3_PB_HySA_28016:HG4_PB_HySA_27088:HG2_PB_HySA_33997:HG3_PB_pbsv_18468:HG4_PB_SVrefine2Falcon1Dovetail_11687:HG4_Ill_svaba_22884:HG4_Ill_SVrefine2DISCOVARDovetail_13065:HG4_Ill_Krunchall_25125:HG4_Ill_GATKHC_29401:HG4_Ill_GATKHCSBGrefine_12657:HG4_Ill_250bpfermikitraw_24089:HG3_Ill_svaba_23155:HG3_Ill_SVrefine2DISCOVARDovetail_13258:HG3_Ill_Krunchall_24342:HG3_Ill_GATKHC_29319:HG3_Ill_GATKHCSBGrefine_12094:HG3_Ill_250bpfermikitraw_23766:HG3_Ill_150bpfermikitraw_23073:HG2_Ill_svaba_22943:HG2_Ill_SVrefine2DISCOVARplusDovetail_7682:HG2_Ill_Krunchall_24818:HG2_Ill_GATKHC_29427:HG2_Ill_GATKHCSBGrefine_12246:HG2_Ill_250bpfermikitraw_24462;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13136:HG4_PB_SVrefine2Falcon1Dovetail_11687:HG4_Ill_svaba_22884:HG4_Ill_SVrefine2DISCOVARDovetail_13065:HG4_Ill_Krunchall_25125:HG4_Ill_GATKHC_29401:HG4_Ill_GATKHCSBGrefine_12657:HG4_Ill_250bpfermikitraw_24089:HG3_Ill_svaba_23155:HG3_Ill_SVrefine2DISCOVARDovetail_13258:HG3_Ill_Krunchall_24342:HG3_Ill_GATKHC_29319:HG3_Ill_GATKHCSBGrefine_12094:HG3_Ill_250bpfermikitraw_23766:HG3_Ill_150bpfermikitraw_23073:HG2_Ill_svaba_22943:HG2_Ill_SVrefine2DISCOVARplusDovetail_7682:HG2_Ill_Krunchall_24818:HG2_Ill_GATKHC_29427:HG2_Ill_GATKHCSBGrefine_12246:HG2_Ill_250bpfermikitraw_24462;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0875;ClusterMaxSizeDiff=0.075;ClusterMaxEditDist=0.184049;PBcalls=5;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=76;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=76;REFWIDENED=20:59014067-59014142;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:37:0|1:27:4:3:27:1|0:1:26:13:0:0/1:22:24:./.:.:.:.:.:.
chr20	59175217	HG3_Ill_GATKHCSBGrefine_12095	C	CCAGGCCCCGCCTCCCACATTGGGGATCACATTTCAACATGAGATGTGGAGGGGACCATGATCCAAACACCTCCCAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11668:HG3_PB_HySA_28017:HG2_PB_HySA_33998:HG2_PB_pbsv_18779:HG4_PB_HySA_27089:HG4_PB_pbsv_18717:HG4_Ill_GATKHC_29404:HG4_Ill_GATKHCSBGrefine_12658:HG4_Ill_250bpfermikitraw_24091:HG3_Ill_Krunchall_24343:HG3_Ill_GATKHC_29320:HG3_Ill_GATKHCSBGrefine_12095:HG3_Ill_250bpfermikitraw_23769:HG2_PB_assemblyticsfalcon_15754:HG2_Ill_GATKHC_29428:HG2_Ill_GATKHCSBGrefine_12247:HG2_Ill_150bpfermikitraw_23047:HG3_PB_SVrefine2PBcRDovetail_9195:HG2_PB_SVrefine2Falcon2Bionano_9282:HG4_PB_SVrefine2Falcon1Dovetail_11688;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23047:HG2_Ill_GATKHCSBGrefine_12247:HG2_Ill_GATKHC_29428:HG2_PB_assemblyticsfalcon_15754:HG3_Ill_250bpfermikitraw_23769:HG3_Ill_GATKHCSBGrefine_12095:HG3_Ill_GATKHC_29320:HG3_Ill_Krunchall_24343:HG4_Ill_250bpfermikitraw_24091:HG4_Ill_GATKHCSBGrefine_12658:HG4_Ill_GATKHC_29404;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0641026;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.217949;PBcalls=10;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=76;DistBack=13;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=153;REFWIDENED=20:59175196-59175348;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3239.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:26:0|1:16:1:1:17:./.:4:4:5:1:0/1:25:9:./.:.:.:.:.:.
chr20	59339368	HG2_PB_SVrefine2Falcon2Bionano_9284	C	CACACACACTTATACACACATTCACACACTCACACACACCTACACACATTTGCACTTAATGTCACACACAGACCTATACACCCATTCACCCACTCACATTTGCACACTCTATCACACACACCTATACACATTCTCTCACACACCTGTACACACATTCACACTCGCATATACACACATCCACACACACCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13139:HG2_PB_pbsv_18781:HG2_Ill_manta_4964:HG4_Ill_GATKHCSBGrefine_12659:HG2_Ill_GATKHCSBGrefine_12249:HG3_Ill_MetaSV_3074:HG4_Ill_MetaSV_3032:HG3_Ill_manta_4046:HG3_Ill_GATKHCSBGrefine_12097:HG2_Ill_MetaSV_2931:HG2_PB_PB10Xdip_18492:HG3_PB_pbsv_18471:HG4_PB_SVrefine2Falcon1Dovetail_11689:HG4_PB_pbsv_18718:HG4_PB_SVrefine2PBcRDovetail_9468:HG3_PB_SVrefine2PBcRDovetail_9196:HG3_PB_SVrefine2Falcon1Dovetail_11670:HG3_Ill_SVrefine2DISCOVARDovetail_13260:HG2_PB_SVrefine2Falcon2Bionano_9284:HG2_PB_SVrefine2PBcRplusDovetail_6562:HG2_PB_SVrefine2Falcon1plusDovetail_7071:HG2_PB_SVrefine2PB10Xhap12_13737:HG4_Ill_SVrefine2DISCOVARDovetail_13067:HG2_Ill_SVrefine2DISCOVARplusDovetail_7683;NumClusterSVs=24;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9284:HG3_Ill_SVrefine2DISCOVARDovetail_13260:HG3_PB_SVrefine2Falcon1Dovetail_11670:HG3_PB_SVrefine2PBcRDovetail_9196;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0867209;ClusterMaxSizeDiff=0.0813008;ClusterMaxEditDist=0.256545;PBcalls=12;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=188;DistBack=25189;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=86;REFWIDENED=20:59339369-59339454;PctSeqSimilarity=0.9861;PctSizeSimilarity=0.9787;PctRecOverlap=0.836;SizeDiff=4;StartDistance=-29;EndDistance=-29;GTMatch=1;TruScore=93;MatchId=3240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:2:22:3:27:1/1:4:148:2:78:1/1:0:12:./.:.:.:.:.:.
chr20	59776793	HG2_PB_SVrefine2PB10Xhap12_13744	A	ATGTCACCTCCATCCTCATCAGGACCCTCCATGGTGTCACCTCCATCCTCACTCAGGACACTCCATGGTGTCACCTCCATCCTTACTCAGGACCCTCCATGGTGTCACCGCCATCCTCACTCAGGACCCTCCATGAGTGCCACCTCCATCCTCACTCAGGATCCCCTGTAAGTGTCACCTCCATCCTCACCAGGACCCTCCATGGTGTCACCGCCATCCTCACTCAGGACCCTCCATGAGTGCCACCTCCATCCTCACCAGGATCCCCTGTAAGTGTCACCTCCATCCTCACCAGGACCCTCCATGAGTGTCACCTCCATCCTCAGGACCCTCCATGAGTGTCACCTCCATCCTCACTCAGGACCCTCCATGGTGTCACCTCCATCCTCACTCAGGACCCTCCATGGTGTCACCTCCATCCTCACTCAGGACCCTCCATGGTGTCACCTCCATCCTCACTCAGGACCCTCCATGGTGTCACCTCCATCCTCACCAGGACCCTCCATGAGTGTCACCTCCATCCTCACTCAGGACCCTCCATGGTGTCACCTCCATCCTCACTCAGGACCCTCCATGGGTGTCACCTCCATCCTCACTCAGGACCCTCCATGGTGTCACCGCCATCCTCACTCAGGACCCTCCATGAGTGTCACCTCCATCCTCACTCAGGACCCTCCATGGTGTCACCTCCATCCTCACTCAGGACCCTCCATGGTGTCACCTCCATCCTCACCAGGATCCCCTGTAAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11673:HG2_PB_SVrefine2Falcon2Bionano_9289:HG2_PB_SVrefine2PBcRplusDovetail_6566:HG2_PB_pbsv_18790:HG2_PB_SVrefine2PB10Xhap12_13744:HG2_PB_SVrefine2Falcon1plusDovetail_7075:HG2_PB_SVrefine2PB10Xhap12_13743:HG3_PB_SVrefine2PBcRDovetail_9203;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13744:HG2_PB_SVrefine2PBcRplusDovetail_6566;NumExactMatchSVs=2;ClusterMaxShiftDist=0.275325;ClusterMaxSizeDiff=0.275325;ClusterMaxEditDist=0.307506;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=748;DistBack=-696;DistForward=-1;DistMin=-696;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=259;REFWIDENED=20:59776794-59777052;PctSeqSimilarity=0.9855;PctSizeSimilarity=0.9947;PctRecOverlap=0.7092;SizeDiff=-4;StartDistance=-217;EndDistance=-217;GTMatch=1;TruScore=89;MatchId=3244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:94:1/1:0:11:4:39:./.:0:10:7:1:0/1:14:7:0/1:4:31:.:1605:.
chr20	59912298	HG2_10X_SVrefine210Xhap12_13149	G	GTGGTGAAGATGATGGTGATGGTGATGGTGGTGATATGATAATAACACTAATGGTGATGATGATAATGATGGTGGTATGATGATGTGGATGGTAATGGTGATGATAACAGTGGATAATGATGGTAATGCAAGTGATGATATTGATGATGATGGTGATGACAGTGCTGATAATGATCATAATGGTGATGATGATGATGGTGATTATTGTAATAGTGATGACAGTGATGATGATAATGATGGTGATAAGAGTGGATAATGATAATAATGATGATGGTGATTTTAATAGTGATGATGATGTTAAGATGATTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13149:HG2_PB_pbsv_18799:HG3_Ill_manta_4049:HG3_PB_pbsv_18493:HG3_Ill_MetaSV_3080:HG3_Ill_GATKHCSBGrefine_12107:HG2_Ill_manta_4967:HG4_PB_HySA_27106:HG4_PB_SVrefine2Falcon1Dovetail_11701:HG2_Ill_MetaSV_2932:HG4_PB_SVrefine2PBcRDovetail_9478:HG4_Ill_manta_4223:HG4_Ill_SVrefine2DISCOVARDovetail_13076:HG4_Ill_MetaSV_3033:HG2_PB_SVrefine2PBcRplusDovetail_6576:HG2_PB_SVrefine2Falcon2Bionano_9295:HG2_PB_SVrefine2Falcon1plusDovetail_7083:HG2_10X_SVrefine210Xhap12_13150:HG2_PB_SVrefine2PB10Xhap12_13754:HG2_PB_PB10Xdip_18516:HG2_Ill_breakscan11_4916:HG4_PB_pbsv_18735:HG4_PB_SVrefine2Falcon1Dovetail_11700:HG3_PB_SVrefine2PBcRDovetail_9209:HG3_PB_SVrefine2Falcon1Dovetail_11678:HG3_Ill_SVrefine2DISCOVARDovetail_13267:HG2_PB_SVrefine2PBcRplusDovetail_6575:HG2_PB_SVrefine2Falcon1plusDovetail_7082:HG2_Ill_SVrefine2DISCOVARplusDovetail_7688;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13149:HG4_PB_SVrefine2Falcon1Dovetail_11700:HG3_PB_SVrefine2PBcRDovetail_9209:HG3_PB_SVrefine2Falcon1Dovetail_11678:HG3_Ill_SVrefine2DISCOVARDovetail_13267:HG2_PB_SVrefine2PBcRplusDovetail_6575:HG2_PB_SVrefine2Falcon1plusDovetail_7082:HG2_Ill_SVrefine2DISCOVARplusDovetail_7688;NumExactMatchSVs=8;ClusterMaxShiftDist=0.10828;ClusterMaxSizeDiff=0.10828;ClusterMaxEditDist=0.276923;PBcalls=16;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=308;DistBack=5531;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=121;REFWIDENED=20:59912299-59912419;PctSeqSimilarity=0.9797;PctSizeSimilarity=0.984;PctRecOverlap=0.8083;SizeDiff=-5;StartDistance=-58;EndDistance=-58;GTMatch=0;TruScore=92;MatchId=3245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:76:1/1:1:27:1:34:1/1:0:32:1:28:1/1:0:21:1/1:2:56:.:.:.
chr20	59928659	HG3_PB_SVrefine2Falcon1Dovetail_11680	A	ACTGCCTTCCTCCCCCTCCTCCCCATCTTTCTCCCCTTCCCCCCCCCCCTCCTCTGTCTTCCCCCTACTCCTCCCCTTCTCCCTCCCCCTTCTCCCCTCTTCCTCCCCTTCCCCCTCCTCTTCCCCCCTCCTCCTCCTCCCCTTCCCCTCCCATTACCCCTTCTCCTCCTCCTCTTCCTCCCCCTCCTCCTCTTCTTCCTCCTCTTCCCTCTCCTCCTCCTCCCCCTCCTCCCCTCCCCCTGTTCCCCTTTTCCTCTGGAAGGCGATGAGAATACAGTATGATGATTCACCCTTCCCCTCCCCTCCCCCTCCCTCCTCCCCCTACTCTTCCTCCCCCTCCTCCTCCCTCTCCCCCTCCTCTCCTTCCCCTCCCTCCTCCTCCTCCCCTCCCCTCCTCCTCCTCTTCCCCCTCCTCCTCTTCTTCCTCCCTTCCCCCTCCTCCTCCTCCCTCTCCTCCTCCTCCCCCTGTTCCCCTTTTCCTCTGGAAGGTGATGAGAGTACAGTATGATGATTCACCCTCCCCCCCCTCCTCCCTCCCCCTCCCCTCCTCCTCCTCTTCCCCTCCACCTCTT	10	PASS	ClusterIDs=HG3_PB_pbsv_18495:HG2_PB_pbsv_18800:HG4_PB_pbsv_18736:HG3_PB_HySA_28048:HG2_PB_PB10Xdip_18517:HG2_PB_SVrefine2Falcon1plusDovetail_7084:HG4_PB_SVrefine2Falcon1Dovetail_11702:HG2_PB_SVrefine2PBcRplusDovetail_6577:HG2_PB_SVrefine2PB10Xhap12_13755:HG2_PB_SVrefine2Falcon2Bionano_9296:HG3_PB_SVrefine2PBcRDovetail_9211:HG4_PB_SVrefine2PBcRDovetail_9479:HG3_PB_SVrefine2Falcon1Dovetail_11680:HG2_PB_HySA_34030:HG4_PB_HySA_27107;NumClusterSVs=15;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11680;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0572917;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.214533;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=571;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=103;REFWIDENED=20:59928660-59928762;PctSeqSimilarity=0.9879;PctSizeSimilarity=0.9794;PctRecOverlap=0.9794;SizeDiff=-12;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3246.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:./.:0:3:0:10:1/1:0:16:0:25:1/1:0:9:./.:3:34:.:.:.
chr20	60019315	HG3_PB_SVrefine2PBcRDovetail_9214	C	CTATGTGTGTGTCTCCGTGTGTCTTTGTGTGTGTATATGTGTGTTTGTGTATCTGTGTATGAGTCTTTGTGTGTGTTTCTGTGTATCTGTGTGTGTCCATGTCTATGTGTGTCTGTGTGTGTATGTATGTCTGGGTGTATATCTGTGTGTGTGTCTTTGCGTTCACCTGTGTGTGTGTGCATCTGTGTGTACATTTGTGTGTTTCTGCATGTGTGTGTCTGCGTACATCTGTGTCTGTGTGTATATTTGTGTATCCGTATGTATGTGTATCTGTGTGTGTCTTTGTGTACATCCGTGTCTGTGTGTATATTTGTATCTGTGTGTTTCTCTGTGTGCATCTGTGTATATTTGTGAGTTTCTGCATGTGTGTGTGTGTCTGTGTGTGTGTCTGTGTATCTATTTG	20	PASS	ClusterIDs=HG3_PB_pbsv_18502:HG4_PB_pbsv_18740:HG2_Ill_MetaSV_2935:HG2_PB_PB10Xdip_18524:HG2_Ill_breakscan11_4918:HG4_PB_HySA_27113:HG2_PB_HySA_34033:HG4_Ill_manta_4227:HG4_Ill_MetaSV_3036:HG4_Ill_GATKHCSBGrefine_12667:HG3_Ill_MetaSV_3082:HG3_Ill_GATKHCSBGrefine_12112:HG2_Ill_GATKHCSBGrefine_12261:HG4_PB_assemblyticsfalcon_15498:HG2_PB_assemblyticsfalcon_15783:HG3_PB_assemblyticsfalcon_15723:HG4_PB_SVrefine2Falcon1Dovetail_11706:HG4_PB_SVrefine2PBcRDovetail_9483:HG4_Ill_SVrefine2DISCOVARDovetail_13080:HG3_PB_SVrefine2PBcRDovetail_9214:HG3_Ill_SVrefine2DISCOVARDovetail_13270:HG2_PB_SVrefine2PBcRplusDovetail_6582:HG2_PB_SVrefine2PB10Xhap12_13760:HG2_PB_SVrefine2Falcon2Bionano_9300:HG2_PB_SVrefine2Falcon1plusDovetail_7089:HG2_Ill_SVrefine2DISCOVARplusDovetail_7695:HG3_PB_SVrefine2Falcon1Dovetail_11684:HG2_PB_pbsv_18806;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7695:HG2_PB_SVrefine2Falcon1plusDovetail_7089:HG2_PB_SVrefine2Falcon2Bionano_9300:HG2_PB_SVrefine2PB10Xhap12_13760:HG2_PB_SVrefine2PBcRplusDovetail_6582:HG3_Ill_SVrefine2DISCOVARDovetail_13270:HG3_PB_SVrefine2PBcRDovetail_9214:HG4_Ill_SVrefine2DISCOVARDovetail_13080:HG4_PB_SVrefine2PBcRDovetail_9483;NumExactMatchSVs=9;ClusterMaxShiftDist=0.126829;ClusterMaxSizeDiff=0.126829;ClusterMaxEditDist=0.195006;PBcalls=17;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=402;DistBack=96;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=20:60019316-60019326;PctSeqSimilarity=0.9976;PctSizeSimilarity=1;PctRecOverlap=0.9801;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=99;MatchId=3248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:105:1/1:4:48:1:29:./.:41:448:51:465:1/1:0:16:1/1:1:111:.:.:.
chr20	60050505	HG2_PB_SVrefine2Falcon2Bionano_9301	A	ACCTCCCCCCCTCTCTCCCTCCTCTCCCTCCCCCTCTCTACCTCCCTCCCTCCTCTCCCTCCCCCCTCTCTCCATCTCTGCCTTCCCCCTCCCTCCCCACCCTCCACCTCTCTCTCTCTTTCCATCCCTGCCCTCCCTCTCTCCCTCCCTGTCCCTCCCTCCCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTCTCCCTCTCTCGCCCTCTCTCGCCCTCTCTCGCCCTCTCTCTCCCTCCCCCTTCCTTCTCTCTCTCTGTCCCTTCCGTCCCTCTCTCTCCCTGCCCTTCCCTCCCTCTCTCTCCCTGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13761:HG4_PB_pbsv_18741:HG4_PB_HySA_27114:HG2_PB_PB10Xdip_18525:HG3_PB_HySA_28054:HG3_PB_pbsv_18503:HG3_PB_SVrefine2PBcRDovetail_9215:HG2_PB_SVrefine2Falcon1plusDovetail_7090:HG2_PB_SVrefine2Falcon2Bionano_9301:HG4_PB_SVrefine2PBcRDovetail_9484:HG3_PB_SVrefine2Falcon1Dovetail_11685:HG4_PB_SVrefine2Falcon1Dovetail_11707:HG2_PB_SVrefine2PBcRplusDovetail_6583;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9301;NumExactMatchSVs=1;ClusterMaxShiftDist=0.189831;ClusterMaxSizeDiff=0.189831;ClusterMaxEditDist=0.237232;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=309;DistBack=17264;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=252;REFWIDENED=20:60050506-60050757;PctSeqSimilarity=0.9768;PctSizeSimilarity=0.9936;PctRecOverlap=0.8167;SizeDiff=-2;StartDistance=-56;EndDistance=-56;GTMatch=1;TruScore=92;MatchId=3249.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:2:26:1:29:./.:5:12:2:7:0/1:5:3:0/1:3:17:.:.:.
chr20	60289079	HG2_Ill_150bpfermikitraw_23065	T	TTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATG	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_12265:HG2_PB_pbsv_18816:HG4_PB_pbsv_18749:HG4_Ill_Krunchall_25140:HG4_Ill_250bpfermikitraw_24113:HG2_Ill_Krunchall_24837:HG2_Ill_250bpfermikitraw_24479:HG2_Ill_150bpfermikitraw_23065:HG4_Ill_GATKHCSBGrefine_12670;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23065:HG2_Ill_250bpfermikitraw_24479:HG2_Ill_Krunchall_24837:HG4_Ill_250bpfermikitraw_24113:HG4_Ill_Krunchall_25140;NumExactMatchSVs=5;ClusterMaxShiftDist=0.046875;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.109375;PBcalls=2;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=14229;DistForward=34;DistMin=34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=20:60289080-60289118;PctSeqSimilarity=0.9347;PctSizeSimilarity=0.9846;PctRecOverlap=0.4769;SizeDiff=1;StartDistance=-34;EndDistance=-34;GTMatch=0;TruScore=79;MatchId=3250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:33:0|1:31:3:1:30:0|1:10:0:0:6:0/1:23:21:./.:.:.:.:.:.
chr20	60370060	HG3_PB_SVrefine2PBcRDovetail_9223	G	GGATGATGGTGATAAAGGTGGGAGTGGTGGTGATGATGTTTATGATGAGGATGATGATGGTTATAATGGTGAGGGTGATGATGTTGATGTTGATGATGGTGGTGATGATGGTGGTGATAATGGTGATGATGGAAATGGTGATGGTGATGATGATGGTAGTGATGATGGTGATGGTAGTGATAATGGTGATGATGATGGTGATGGTAGTGATGGTGGTGATGATGGTAATGGTAGTGATGATGGTGATGGTAGTGATAATGGTGGTGATGGTGATGATGATGGTAGTAATGATGATGATGGTAGTGATGATGGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9492:HG2_PB_PB10Xdip_18541:HG2_PB_pbsv_18823:HG4_Ill_MetaSV_3038:HG4_Ill_GATKHCSBGrefine_12673:HG3_Ill_MetaSV_3085:HG3_Ill_GATKHCSBGrefine_12123:HG2_Ill_MetaSV_2939:HG2_Ill_GATKHCSBGrefine_12269:HG2_PB_HySA_34057:HG4_PB_HySA_27124:HG3_PB_HySA_28070:HG4_PB_pbsv_18756:HG3_PB_SVrefine2Falcon1Dovetail_11694:HG2_Ill_SVrefine2DISCOVARplusDovetail_7700:HG4_PB_SVrefine2Falcon1Dovetail_11714:HG3_PB_SVrefine2PBcRDovetail_9223:HG3_Ill_SVrefine2DISCOVARDovetail_13274:HG2_PB_SVrefine2PBcRplusDovetail_6591:HG2_PB_SVrefine2PB10Xhap12_13771:HG2_PB_SVrefine2Falcon2Bionano_9308:HG2_PB_SVrefine2Falcon1plusDovetail_7094:HG3_PB_SVrefine2Falcon1Dovetail_11693;NumClusterSVs=23;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7094:HG2_PB_SVrefine2Falcon2Bionano_9308:HG2_PB_SVrefine2PB10Xhap12_13771:HG2_PB_SVrefine2PBcRplusDovetail_6591:HG3_Ill_SVrefine2DISCOVARDovetail_13274:HG3_PB_SVrefine2PBcRDovetail_9223:HG4_PB_SVrefine2Falcon1Dovetail_11714;NumExactMatchSVs=7;ClusterMaxShiftDist=0.15142;ClusterMaxSizeDiff=0.15142;ClusterMaxEditDist=0.272588;PBcalls=15;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=312;DistBack=10273;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=155;REFWIDENED=20:60370061-60370215;PctSeqSimilarity=0.9562;PctSizeSimilarity=0.9423;PctRecOverlap=0.5559;SizeDiff=18;StartDistance=-130;EndDistance=-130;GTMatch=0;TruScore=81;MatchId=3251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:86:1/1:1:26:0:43:1/1:1:35:1:13:1/1:0:19:1/1:2:59:.:.:.
chr20	60396495	HG4_Ill_GATKHCSBGrefine_12674	C	CCCACCCCAGCCCAGATCCCACTGCTCCAGTCCCCTCTCCCTATGCAGCCT	20	PASS	ClusterIDs=HG2_Ill_GATKHC_29465:HG3_PB_assemblyticsfalcon_15739:HG3_Ill_GATKHC_29352:HG2_PB_pbsv_18824:HG3_PB_HySA_28072:HG4_Ill_GATKHC_29435:HG4_Ill_GATKHCSBGrefine_12674:HG3_Ill_GATKHC_29351;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_29465:HG4_Ill_GATKHC_29435:HG4_Ill_GATKHCSBGrefine_12674:HG3_Ill_GATKHC_29351;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0761905;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.228571;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=26297;DistForward=64;DistMin=64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=461;REFWIDENED=20:60396162-60396622;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:23:0|1:21:2:1:18:./.:1:4:4:0:./.:1:2:./.:.:.:.:.:.
chr20	60468307	HG2_PB_SVrefine2Falcon1plusDovetail_7096	T	TGGGTGGGTGGATGGATAGATGGATAGATATGTGAATAGAGAGATGGTGGATGGAGGGGTGGGTGGATAGATGGATGGGTGGGTGAATAGAGGGATGGTGGATGGAG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_18543:HG3_PB_SVrefine2PBcRDovetail_9225:HG4_PB_pbsv_18759:HG4_PB_SVrefine2PBcRDovetail_9494:HG2_PB_pbsv_18826:HG4_PB_SVrefine2Falcon1Dovetail_11716:HG3_PB_SVrefine2Falcon1Dovetail_11696:HG3_Ill_SVrefine2DISCOVARDovetail_13276:HG2_PB_SVrefine2PBcRplusDovetail_6593:HG2_PB_SVrefine2PB10Xhap12_13773:HG2_PB_SVrefine2Falcon2Bionano_9310:HG2_PB_SVrefine2Falcon1plusDovetail_7096:HG4_PB_assemblyticsfalcon_15517:HG3_PB_assemblyticsfalcon_15742:HG2_PB_assemblyticsfalcon_15797;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7096:HG2_PB_SVrefine2Falcon2Bionano_9310:HG2_PB_SVrefine2PB10Xhap12_13773:HG2_PB_SVrefine2PBcRplusDovetail_6593:HG3_Ill_SVrefine2DISCOVARDovetail_13276:HG3_PB_SVrefine2Falcon1Dovetail_11696:HG4_PB_SVrefine2Falcon1Dovetail_11716:HG4_PB_SVrefine2PBcRDovetail_9494;NumExactMatchSVs=8;ClusterMaxShiftDist=0.115556;ClusterMaxSizeDiff=0.0986547;ClusterMaxEditDist=0.204444;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=106;DistBack=19;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=657;REFWIDENED=20:60468270-60468879;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:40:1/1:2:25:2:8:./.:78:362:54:350:./.:0:0:./.:.:.:.:.:.
chr20	60494941	HG3_PB_SVrefine2PBcRDovetail_9226	T	TGTGATTGTGTGGAAGCATGGTATCGTGATTATGTGGAAGCGTGGTGTCACGGTGATTGCGTGGAAGCGTGTTGTGATTGTGTGGAAGCGTGGTATCGCGGTGATTGCATGGAAGTGTGGTGTCACAGTGATTGCGTGGAAGCGTGTCGTGATTGTGTGGAAGCATGGTATCGTGATTGTGTGGAAGCGTGGTGTCACGGTGATTGCGTGGAAGCATGTTGTGATTGTGTGGAAGCGTGGTGTGATTGTGTGGAAGCATGGTATCGTGATTGTGGAAGCGTGGTATCGCGGCGATTGTGTGGAAGCGTGGTGTCGCAGTGATTGCGTGGAAGCATGTTGTGATTGTGTGGAAGCGTGGTATCGTGATTGTGTGGAAGCATGGTGTCGTGATTGTGTGGAAGCATGTCGTGATTGTGTGGAAGTGTGATGTCACGGTGATTGCGTGGAAGCGTGTTGTGATTGTGTGGAAGCGTGGTATCGTGATTGGAAGTGTGGTGTCACGCTGATTGCATGGAAGTGTGTTGTGATTGTGTGGAAGCGTGATATCGCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11697:HG2_PB_pbsv_18828:HG4_PB_pbsv_18761:HG4_Ill_GATKHCSBGrefine_12675:HG2_Ill_GATKHCSBGrefine_12270:HG2_PB_HySA_34062:HG4_PB_HySA_27126:HG3_PB_HySA_28074:HG2_PB_PB10Xdip_18544:HG3_PB_pbsv_18521:HG2_PB_SVrefine2Falcon2Bionano_9311:HG2_PB_SVrefine2Falcon1plusDovetail_7097:HG4_PB_SVrefine2PBcRDovetail_9495:HG4_PB_SVrefine2Falcon1Dovetail_11717:HG4_Ill_SVrefine2DISCOVARDovetail_13087:HG3_PB_SVrefine2PBcRDovetail_9226:HG3_Ill_SVrefine2DISCOVARDovetail_13277:HG2_PB_SVrefine2PBcRplusDovetail_6594:HG2_PB_SVrefine2PB10Xhap12_13774:HG2_Ill_SVrefine2DISCOVARplusDovetail_7701;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7701:HG2_PB_SVrefine2PB10Xhap12_13774:HG2_PB_SVrefine2PBcRplusDovetail_6594:HG3_Ill_SVrefine2DISCOVARDovetail_13277:HG3_PB_SVrefine2PBcRDovetail_9226:HG4_Ill_SVrefine2DISCOVARDovetail_13087:HG4_PB_SVrefine2Falcon1Dovetail_11717:HG4_PB_SVrefine2PBcRDovetail_9495;NumExactMatchSVs=8;ClusterMaxShiftDist=0.114943;ClusterMaxSizeDiff=0.107869;ClusterMaxEditDist=0.286198;PBcalls=15;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=549;DistBack=151;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1028;REFWIDENED=20:60494942-60495969;PctSeqSimilarity=0.9804;PctSizeSimilarity=0.9854;PctRecOverlap=0.5938;SizeDiff=8;StartDistance=-219;EndDistance=-219;GTMatch=0;TruScore=85;MatchId=3254.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:91:1/1:2:36:1:16:1/1:1:27:1:33:./.:0:1:1/1:3:58:.:.:.
chr20	60556795	HG2_PB_SVrefine2PB10Xhap12_13778	A	AAGACAGCAAACCACACCCCACCCGAGAGGAGACACCAAACCCACACCCACCCGAGAGGAGACACCAAACCCACACAACCCACACCCACCGGAGAGGAGACATCAAACCCACACCCACCCGAGAGGAGACACCAAACTCACACCCCACCCGAGAGGAGACATCAAACCCACACCCCACCCGATAGGAGACACCAAACCCACACAACCCACACCCACCGGAGAGGAGACATCAAACCCACACCCACCCGAGAGGAGACACCAAACTCACACCCCACCCGAGAGGAGACATCAAACCCACACCCCACCCAAGAGGAGACACCAAACCCACACCCCACCCGATAGGAGACACCAAACCCACACAACCCACACCCACCGGAGAGGAGACATCAAACCCACACCCACCCGAGAGGAGACACCAAACTCACACCCCACCCGAGAGGAGACATCAAACCCACACCCCACCCAAGAGGAGACACCAAACCCACACCCACCTGAGAGGAGACACCAAACCCACACAACACACACCCACCGGAGAGGAGACATCAAACCCATACCCACCCTAGAAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7100:HG4_PB_SVrefine2Falcon1Dovetail_11722:HG4_PB_SVrefine2PBcRDovetail_9497:HG3_PB_SVrefine2PBcRDovetail_9229:HG2_PB_SVrefine2PBcRplusDovetail_6597:HG2_PB_SVrefine2PB10Xhap12_13778:HG2_PB_SVrefine2Falcon2Bionano_9314:HG3_PB_SVrefine2Falcon1Dovetail_11701;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13778:HG2_PB_SVrefine2PBcRplusDovetail_6597:HG3_PB_SVrefine2PBcRDovetail_9229:HG4_PB_SVrefine2PBcRDovetail_9497;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00887311;ClusterMaxSizeDiff=0.00887311;ClusterMaxEditDist=0.0195904;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=565;DistBack=2236;DistForward=44;DistMin=44;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=989;REFWIDENED=20:60556796-60557784;PctSeqSimilarity=0.9549;PctSizeSimilarity=0.9593;PctRecOverlap=0.1935;SizeDiff=-24;StartDistance=-463;EndDistance=-463;GTMatch=0;TruScore=70;MatchId=3256.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:1/1:1:21:0:19:./.:2:14:0:10:./.:0:3:1/1:0:19:2331:.:.
chr20	60560098	HG2_PB_pbsv_18838	G	GGTGGTTATGGGGAAGGGAAGGTGGCAGGGGAGGGAGGGTGCAGTGGGGGGAGGGTGTGTGGGGGAGGGAAGGTTGTGGGGGGGAAGAGGAGACGGCAGGGAAAGGAGGGGTTTGTGGGGGCGAGGGAGGGGGCGGCGGGGAAGGGAGGGGTGGCGGGGTAGGGAGGCATGGGGGGGAGGAGGGGTGCAGCAGGGGGATTGGAGGGCGTGGGGGAGGGAGGGGGCGGCGGGGGGGAGGGAGGGCGTGGGGGGGAGGGAGGGGTGTGGGGGAGGGAGGGGGCGGGCGGGAGGAGGGAGGGGTGCGTCGGGAGAGGGAGGGGGCGGCGGGAGGAGGGGAAGGGGGCGCGGGAGGCAGGGAGGATGGGGGAGGAGGGGGCGGCGGGGGGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11702:HG4_PB_SVrefine2PBcRDovetail_9498:HG4_PB_SVrefine2Falcon1Dovetail_11723:HG2_PB_pbsv_18838:HG2_PB_PB10Xdip_18555:HG2_PB_SVrefine2PB10Xhap12_13779:HG2_PB_SVrefine2PBcRplusDovetail_6598:HG2_PB_SVrefine2Falcon2Bionano_9315:HG2_PB_SVrefine2Falcon1plusDovetail_7102:HG4_PB_pbsv_18771:HG3_PB_SVrefine2PBcRDovetail_9230:HG3_PB_pbsv_18525:HG2_PB_SVrefine2Falcon1plusDovetail_7101;NumClusterSVs=13;ExactMatchIDs=HG2_PB_pbsv_18838;NumExactMatchSVs=1;ClusterMaxShiftDist=0.189415;ClusterMaxSizeDiff=0.189415;ClusterMaxEditDist=0.297111;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=386;DistBack=364;DistForward=2485;DistMin=364;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=20:60560099-60560099;PctSeqSimilarity=0.9528;PctSizeSimilarity=0.9797;PctRecOverlap=0.9797;SizeDiff=-8;StartDistance=1;EndDistance=1;GTMatch=1;TruScore=97;MatchId=3257.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:0:23:3:22:./.:0:13:1:11:1/1:0:13:1/1:0:12:2331:.:.
chr20	60630318	HG4_Ill_GATKHC_29443	A	AGTCCTGCAAGACGATCGATTCACGCTGCCTGCGGGCGGTCCTGCAAGACGATCGATTCACGCTGCCTGCGGGCG	20	PASS	ClusterIDs=HG2_PB_HySA_34063:HG2_PB_PB10Xdip_18558:HG4_PB_HySA_27130:HG2_PB_pbsv_18840:HG4_PB_assemblyticsfalcon_15527:HG4_PB_pbsv_18773:HG4_Ill_GATKHC_29443:HG4_Ill_250bpfermikitraw_24125:HG4_Ill_150bpfermikitraw_23207:HG2_Ill_GATKHC_29472:HG2_Ill_GATKHCSBGrefine_12273:HG2_Ill_250bpfermikitraw_24488;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24488:HG2_Ill_GATKHCSBGrefine_12273:HG2_Ill_GATKHC_29472:HG4_Ill_150bpfermikitraw_23207:HG4_Ill_250bpfermikitraw_24125:HG4_Ill_GATKHC_29443:HG4_PB_assemblyticsfalcon_15527;NumExactMatchSVs=7;ClusterMaxShiftDist=0.198675;ClusterMaxSizeDiff=0.18543;ClusterMaxEditDist=0.3;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=1;DistForward=54;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=3868;REFWIDENED=20:60630190-60633983;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:30:0|1:20:3:1:22:./.:6:0:2:2:0/1:19:10:./.:.:.:.:1568:.
chr20	60680864	HG3_Ill_svaba_23183	A	AGATGGGCAGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGACGGATGGATGGATGGATG	20	PASS	ClusterIDs=HG3_Ill_svaba_23183:HG4_PB_pbsv_18775:HG2_PB_PB10Xdip_18568:HG2_PB_pbsv_18842:HG2_PB_HySA_34076:HG4_Ill_GATKHC_29445:HG2_Ill_GATKHC_29473:HG3_Ill_GATKHC_29357:HG3_PB_pbsv_18527:HG4_Ill_GATKHC_29444:HG4_Ill_GATKHCSBGrefine_12681:HG4_Ill_svaba_22915;NumClusterSVs=12;ExactMatchIDs=HG3_Ill_svaba_23183:HG4_Ill_svaba_22915;NumExactMatchSVs=2;ClusterMaxShiftDist=0.152866;ClusterMaxSizeDiff=0.140127;ClusterMaxEditDist=0.296774;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=27;DistForward=23;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=253;REFWIDENED=20:60680758-60681010;PctSeqSimilarity=0.9529;PctSizeSimilarity=0.9;PctRecOverlap=0.8519;SizeDiff=-8;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=90;MatchId=3259.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:./.:13:15:11:13:./.:20:1:5:27:0/1:23:8:./.:.:.:.:.:.
chr20	60866874	HG2_PB_SVrefine2Falcon2Bionano_9318	G	GCTGGGGCAGCGGGGAGGCCCCACACACACCTGGGGACGGCGGGGAGGCCCCACACACAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7112:HG2_PB_HySA_34081:HG2_PB_pbsv_18848:HG2_Ill_250bpfermikitraw_24491:HG4_PB_pbsv_18779:HG2_PB_SVrefine2PBcRplusDovetail_6602:HG2_PB_PB10Xdip_18570:HG2_PB_SVrefine2PB10Xhap12_13785:HG2_PB_SVrefine2Falcon2Bionano_9318:HG2_Ill_SVrefine2DISCOVARplusDovetail_7708;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7708:HG2_PB_SVrefine2Falcon2Bionano_9318:HG2_PB_SVrefine2PB10Xhap12_13785:HG2_PB_SVrefine2PBcRplusDovetail_6602;NumExactMatchSVs=4;ClusterMaxShiftDist=0.216216;ClusterMaxSizeDiff=0.191304;ClusterMaxEditDist=0.342342;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=59;DistBack=-59;DistForward=-1;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=65;REFWIDENED=20:60866873-60866940;PctSeqSimilarity=0.9854;PctSizeSimilarity=0.9833;PctRecOverlap=0.8525;SizeDiff=-1;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=94;MatchId=3260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:45:./.:4:27:14:12:./.:7:2:4:1:0/1:14:12:./.:.:.:.:.:.
chr20	60924709	HG2_PB_SVrefine2Falcon2Bionano_9319	A	ATGGGGATGGGGATGGGGATGGTGGGGGTGATGGGGGTGATGATGGTGATGGTGGGGGTGATGATGGTGATGGTGATGGTGATGTGTGGTGATGGTGGGGGGGGTGGTGATGGTGGGGTGGGGGTGATGATGGTGATGGTGGGGGTGATGACGGTGGGGCTGGGGGTGATGATGGTGGGGGTGATGACGGTGATGATGGGGGTGGAGGGGTGATGACGGTGATGATGGGGTGGGGGGGTGATGACGGTGATGTGGGGGTGATGACGGTGGGGGTGGGGGTGATGACGGTGATGGTGGGGGTGATGACGGTGGGGGTGGGGGTGATGACGGTGGGGGGTGGGGGTGATGACGGTGGGGGTGGGGGTGATGACGGTGGGGGTGGGGGGTGATGATGGTGATGGTGGGGGTGATGATGGTGGGGGTGGGGGTGATGATGGTGAGGGTGATGATGGTGGGGGTAATGACGGTGGGGTGGGGGTGATGACGGTGGGGGTGGGGGTGATGACGGTGATGGTGGGGGTGATGACGATGATGGTGGGGGTGATGACGGTGATGGCGGTGGGGGTGATGACGGTGGGGGTGGGGGTGATGACGGTGGGGGTGGGGGTGATGACGGTGGGGGGTGGGGGGTGATGACGGTGGGGGTGGGGGTGATGACGGTGGGGGTGGGGGTGATGACGGTGGGGTGGGGGTGATGACGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9503:HG4_PB_SVrefine2Falcon1Dovetail_11733:HG4_PB_pbsv_18782:HG2_PB_SVrefine2Falcon1plusDovetail_7113:HG3_PB_assemblyticsfalcon_15757:HG3_PB_SVrefine2Falcon1Dovetail_11707:HG2_PB_pbsv_18852:HG3_PB_SVrefine2PBcRDovetail_9233:HG3_PB_pbsv_18532:HG2_PB_SVrefine2Falcon2Bionano_9319:HG2_PB_SVrefine2PBcRplusDovetail_6603;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9319;NumExactMatchSVs=1;ClusterMaxShiftDist=0.192908;ClusterMaxSizeDiff=0.192908;ClusterMaxEditDist=0.329078;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=700;DistBack=-189;DistForward=10;DistMin=-189;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=190;REFWIDENED=20:60924710-60924899;PctSeqSimilarity=0.9628;PctSizeSimilarity=0.9914;PctRecOverlap=0.7832;SizeDiff=6;StartDistance=-149;EndDistance=-149;GTMatch=1;TruScore=91;MatchId=3261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:3:11:0:14:./.:1:7:0:5:./.:0:6:1/1:1:31:.:6878:.
chr20	60957270	HG2_PB_SVrefine2PB10Xhap12_13788	A	AATGATAGTGATGATGATGGTGGTGATGATAGTGGTGATGGTGATGATGGTGGTGGTGATGATAGTGATGGTGATATTGATGATGTGATGATGATGGTGGTGGTGGTGGCGATGGTGATGATGGTATTGACGATGATGATGACGGTGGTGATGGTGGTGGTGATGGTGATGATGGTGGTGGTGGTGATGGTGATGGTGGTGATGATGGTGGTGGTGATGGTGATGGTGACGATGGTGGTGATGGTGGTGGTGGTGATGGTGACGATGGTGGTGATGGTGGTGGTGGTGATGGTGGTGATGATGGTGATGGTGGTGATGGTGATGCTGATGGTGGTGGTGATGATGGTGATGGTGAGGATGGTGGTGACGGTGGTCATGATGGTGATGATGGTGGTGATGATGATGGTGATGGTGGTGGTGATGATGGTGATGGTAGTGATGATGGAGGTGACGGTGATGGTGATAGTGATGGTGGTGATGATGGTGGTGGTGGTGGTGATGGTGATGGTGGTGATGGTGATGCTGGTGGTGATGGTGATGGTGGTGGTGATGGTGATGATGATGGTGATGGTGGTGATGATGATGGTGATGGTAGTGATGATGGTGGTGATGGTGATGATGGTGATGGTAGTGATGATGGTGGTGGTGGTGATGGTGGTCATGATGGTGATGGTGGTGATGGTGGTGACGGTGGTGGTGGTGATGGTGACGGTGGTCATGGTGGTGGTGATGGTGATGGTGGTGATGGTGGTGGTGATGGTGATGATGATGGTGGCAATGGTGATGATGTGATGATGGTGGTGGTGATGATAGTGATGGCGATGATGTGATGATGGTGGTGGTGGTGGTGATGGCGATGGTGATGATGGTGGTGATGATAGTGATGGCGATGATGTGATGATGGTGGTGGTGATGATAGTGATGGCGATGATGTGATGGTGGTGGTGATAGTGATGGCG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11736:HG2_PB_pbsv_18855:HG2_PB_PB10Xdip_18575:HG2_Ill_breakscan11_4924:HG2_Ill_MetaSV_2944:HG2_PB_HySA_34098:HG3_PB_pbsv_18535:HG3_PB_SVrefine2Falcon1Dovetail_11708:HG3_PB_HySA_28099:HG2_PB_assemblyticsPBcR_15413:HG4_PB_assemblyticsfalcon_15545:HG3_PB_assemblyticsfalcon_15760:HG4_PB_SVrefine2Falcon1Dovetail_11737:HG4_PB_pbsv_18786:HG3_PB_SVrefine2PBcRDovetail_9235:HG2_PB_SVrefine2PBcRplusDovetail_6606:HG2_PB_SVrefine2PB10Xhap12_13788:HG2_PB_SVrefine2Falcon2Bionano_9321:HG2_PB_SVrefine2Falcon1plusDovetail_7115:HG4_PB_assemblyticsfalcon_15544;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9321:HG2_PB_SVrefine2PB10Xhap12_13788:HG2_PB_SVrefine2PBcRplusDovetail_6606:HG3_PB_SVrefine2PBcRDovetail_9235;NumExactMatchSVs=4;ClusterMaxShiftDist=0.236536;ClusterMaxSizeDiff=0.236536;ClusterMaxEditDist=0.319958;PBcalls=18;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=958;DistBack=6498;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=74;REFWIDENED=20:60957271-60957344;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9958;PctRecOverlap=0.9312;SizeDiff=4;StartDistance=-64;EndDistance=-64;GTMatch=0;TruScore=97;MatchId=3262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:0:11:0:14:./.:1:20:1:19:1/1:0:14:1/1:8:221:.:6878:.
chr20	60997597	HG2_10X_SVrefine210Xhap12_13181	T	TGGGGCCTGGGGTGGGGACGGGGACTGGGGTGGGGATGGCGACTGGGGTGGGGACGGGGACTGGGGTGGGGATGGGGCCCGGGGTGGGGATGGGGCCCGGGGTGGGGACGGGGCCCGGGGTGGGGATGGGGACTGGGGTGGGGACGGGGCCCGGGGTGGGGAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11710:HG2_PB_SVrefine2Falcon1plusDovetail_7116:HG4_PB_assemblyticsfalcon_15548:HG4_PB_SVrefine2Falcon1Dovetail_11738:HG3_PB_HySA_28103:HG3_PB_pbsv_18538:HG2_PB_PB10Xdip_18577:HG2_PB_HySA_34104:HG2_PB_pbsv_18859:HG2_PB_SVrefine2PBcRplusDovetail_6607:HG2_PB_SVrefine2PB10Xhap12_13789:HG2_10X_SVrefine210Xhap12_13181:HG3_PB_SVrefine2PBcRDovetail_9236:HG2_PB_SVrefine2Falcon2Bionano_9322:HG4_PB_SVrefine2PBcRDovetail_9504;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13181:HG2_PB_SVrefine2PB10Xhap12_13789:HG2_PB_SVrefine2PBcRplusDovetail_6607;NumExactMatchSVs=3;ClusterMaxShiftDist=0.168675;ClusterMaxSizeDiff=0.168675;ClusterMaxEditDist=0.338462;PBcalls=14;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=162;DistBack=4509;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=143;REFWIDENED=20:60997598-60997740;PctSeqSimilarity=0.9821;PctSizeSimilarity=1;PctRecOverlap=0.6258;SizeDiff=0;StartDistance=-61;EndDistance=-61;GTMatch=1;TruScore=86;MatchId=3263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:1:16:4:22:./.:1:3:1:6:./.:0:4:./.:.:.:.:.:.
chr20	61015135	HG2_Ill_SVrefine2DISCOVARplusDovetail_7712	T	TGTGACCTGAGCAGCCCACACCTGTGTCTCCAGCAGCCCACACCTGTGCCCTGAGCAGCCCACACCTGTGCCCTGAGCAGCCCACACCTGTGTCTCCAGCAGCTCACACCTGTGCCCTGAGCAGCCCACACCTGTGCCCTGAGCAGCCTACACCTGTGCCCTGAGCAGCCCACACCTGTGCCCTGAGCAGCTCACACCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13790:HG4_PB_assemblyticsfalcon_15549:HG2_PB_PB10Xdip_18578:HG4_PB_SVrefine2Falcon1Dovetail_11739:HG4_Ill_SVrefine2DISCOVARDovetail_13094:HG2_Ill_SVrefine2DISCOVARplusDovetail_7712:HG2_PB_pbsv_18860:HG2_Ill_GATKHCSBGrefine_12279:HG4_PB_HySA_27140:HG2_PB_HySA_34105:HG4_PB_pbsv_18792:HG2_PB_SVrefine2Falcon1plusDovetail_7117;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7712:HG4_Ill_SVrefine2DISCOVARDovetail_13094;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0594059;ClusterMaxSizeDiff=0.049505;ClusterMaxEditDist=0.203883;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=198;DistBack=-1;DistForward=6007;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=61;REFWIDENED=20:61015078-61015138;PctSeqSimilarity=0.996;PctSizeSimilarity=1;PctRecOverlap=0.7487;SizeDiff=0;StartDistance=50;EndDistance=50;GTMatch=0;TruScore=91;MatchId=3264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:22:0|1:30:1:1:21:0|1:8:0:1:21:0/1:29:8:./.:.:.:.:.:.
chr20	61079363	HG3_PB_SVrefine2PBcRDovetail_9238	G	GTTATCACCACCACCACCACCATCATCATCCCCATCATCACCAACACCATCATCACCCCATCCCCATCATCTCCATCACCACCATCATTTCCATCATCACCATCACCATCACCCTCACGACCACCATCATCATTACTACCATCATCAGCATAATCACCACCATCATCTGCATCACCATCACCACCACCGTCATCCCCATCATCACCATCACCACCACCACCATCATCCCCATCATCACCATCACCACCACCACCATCACCACCATCATCACCACCACTATCTCCATCACCACCATCATCACTATCATCACCGCCACCACCATCACCAATGCTGTTACCGTCATCTCTATCACCAACACTATCATCACCATCATCATACCACCACCATCACTATCATCACCATTACCATCATCACCATTATCACCATCATTACTGTCATCACCACCACCATCCCCATCAACACCATTATTATCACCATCACCATCATCACCAACACCATCACCATCAACACCATTATTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11712:HG2_PB_PB10Xdip_18580:HG2_Ill_MetaSV_2945:HG4_PB_pbsv_18795:HG2_Ill_manta_4976:HG4_Ill_MetaSV_3043:HG4_Ill_GATKHCSBGrefine_12685:HG3_Ill_manta_4056:HG3_Ill_MetaSV_3088:HG2_PB_SVrefine2PB10Xhap12_13792:HG2_Ill_SVrefine2DISCOVARplusDovetail_7713:HG4_Ill_SVrefine2DISCOVARDovetail_13096:HG3_PB_SVrefine2PBcRDovetail_9238:HG3_Ill_SVrefine2DISCOVARDovetail_13282:HG2_PB_SVrefine2PBcRplusDovetail_6609:HG2_PB_SVrefine2Falcon1plusDovetail_7119:HG2_10X_SVrefine210Xhap12_13183:HG4_PB_SVrefine2Falcon1Dovetail_11741:HG3_PB_pbsv_18540;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13183:HG2_PB_SVrefine2Falcon1plusDovetail_7119:HG2_PB_SVrefine2PBcRplusDovetail_6609:HG3_Ill_SVrefine2DISCOVARDovetail_13282:HG3_PB_SVrefine2PBcRDovetail_9238:HG4_Ill_SVrefine2DISCOVARDovetail_13096;NumExactMatchSVs=6;ClusterMaxShiftDist=0.160795;ClusterMaxSizeDiff=0.137432;ClusterMaxEditDist=0.259067;PBcalls=9;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=517;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=112;REFWIDENED=20:61079364-61079475;PctSeqSimilarity=0.9793;PctSizeSimilarity=0.9961;PctRecOverlap=0.7834;SizeDiff=2;StartDistance=-111;EndDistance=-111;GTMatch=0;TruScore=91;MatchId=3265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:1:19:0:18:1/1:0:7:1:16:1/1:0:12:1/1:0:42:.:.:.
chr20	61190182	HG3_Ill_GATKHC_29376	T	TGTGTGCATGCATGTATGGGTTGTGTGCATGCGTGTGAGTGTGTATGCATGTGTGTGCATGCATGTATGGGTGTGTGTGCATGTGTGTATGGGTGTGTGTATGG	20	PASS	ClusterIDs=HG4_PB_pbsv_18796:HG3_PB_assemblyticsfalcon_15768:HG4_Ill_GATKHC_29457:HG4_Ill_GATKHCSBGrefine_12686:HG3_Ill_GATKHC_29376:HG3_Ill_GATKHCSBGrefine_12128:HG2_Ill_GATKHC_29486:HG3_PB_HySA_28108:HG3_PB_SVrefine2Falcon1Dovetail_11713:HG2_PB_SVrefine2Falcon2Bionano_9324:HG2_PB_SVrefine2Falcon1plusDovetail_7121:HG4_Ill_scalpel_16976:HG3_Ill_scalpel_17738:HG2_PB_pbsv_18864:HG3_PB_pbsv_18542;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHC_29486:HG3_Ill_GATKHCSBGrefine_12128:HG3_Ill_GATKHC_29376:HG4_Ill_GATKHCSBGrefine_12686:HG4_Ill_GATKHC_29457;NumExactMatchSVs=5;ClusterMaxShiftDist=0.206897;ClusterMaxSizeDiff=0.206897;ClusterMaxEditDist=0.26087;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=103;DistBack=-1;DistForward=184;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=115;REFWIDENED=20:61190073-61190187;PctSeqSimilarity=0.9456;PctSizeSimilarity=0.8803;PctRecOverlap=0.6325;SizeDiff=-14;StartDistance=36;EndDistance=36;GTMatch=0;TruScore=81;MatchId=3267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:38:0|1:27:1:4:34:0|1:14:0:2:46:0/1:14:4:./.:.:.:.:.:.
chr20	61347957	HG3_Ill_GATKHC_29380	G	GTGAGTCTGTGTTGGTTGTGGTTCAAAGCTCGTGGGGCTGTAGACTGAGGGGTGGATTTCAGCACATGTTAGTCCTGCCTCCA	20	PASS	ClusterIDs=HG2_PB_HySA_34118:HG2_PB_pbsv_18867:HG4_PB_assemblyticsfalcon_15556:HG4_Ill_Krunchall_25160:HG4_Ill_GATKHC_29463:HG4_Ill_GATKHCSBGrefine_12688:HG4_Ill_250bpfermikitraw_24135:HG4_Ill_150bpfermikitraw_23221:HG3_Ill_Krunchall_24380:HG3_Ill_GATKHC_29380:HG3_Ill_GATKHCSBGrefine_12131:HG3_Ill_250bpfermikitraw_23809:HG3_Ill_150bpfermikitraw_23113:HG2_Ill_GATKHC_29491:HG2_Ill_GATKHCSBGrefine_12281:HG2_Ill_250bpfermikitraw_24499:HG2_Ill_150bpfermikitraw_23083:HG3_PB_HySA_28110:HG3_PB_pbsv_18545:HG2_Ill_breakscan11_4925:HG4_PB_pbsv_18798;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23083:HG2_Ill_250bpfermikitraw_24499:HG2_Ill_GATKHCSBGrefine_12281:HG2_Ill_GATKHC_29491:HG3_Ill_150bpfermikitraw_23113:HG3_Ill_250bpfermikitraw_23809:HG3_Ill_GATKHCSBGrefine_12131:HG3_Ill_GATKHC_29380:HG3_Ill_Krunchall_24380:HG4_Ill_150bpfermikitraw_23221:HG4_Ill_250bpfermikitraw_24135:HG4_Ill_GATKHCSBGrefine_12688:HG4_Ill_GATKHC_29463:HG4_Ill_Krunchall_25160:HG4_PB_assemblyticsfalcon_15556;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0705882;ClusterMaxSizeDiff=0.0705882;ClusterMaxEditDist=0.321839;PBcalls=6;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=82;DistBack=17028;DistForward=2496;DistMin=2496;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=121;REFWIDENED=20:61347847-61347967;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:39:0|1:27:3:1:33:./.:2:14:19:0:0/1:29:20:./.:.:.:.:.:.
chr20	61617750	HG2_PB_SVrefine2PB10Xhap12_13803	A	AGGTGGGCAGAGGGTGCAGGTGGTCAGTGGTGCAGGTGGGCACTGTTCAGGTGGGCAGAGTGCTGGTGGGTAGGGGTGCAGGTGTGCAGGGGGTGCAGGTGGGCGGGGATGCAGATGGGTGGGAGTGCAGATGGGCAGAGGTGTAGGTGGGTGCAGTACAGGTGGGAAAAGGGTGATGGGGCAGAGGGTGCAGGTGGGCAGAGGGTGCAGGTGGGCGGGGGTGCGGGTGGGCGGGGGTGTGGGTGGGTGGGGGTGCTGGTGGGCAGAGGGTGTAGGTTGGCAGAGGGTGCAGGTGGGCGGGGGTGCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9330:HG4_PB_SVrefine2Falcon1Dovetail_11749:HG3_PB_HySA_28128:HG2_PB_SVrefine2Falcon1plusDovetail_7129:HG3_PB_pbsv_18556:HG2_PB_HySA_34136:HG4_PB_pbsv_18811:HG2_PB_pbsv_18875:HG2_PB_SVrefine2PBcRplusDovetail_6616:HG3_PB_SVrefine2Falcon1Dovetail_11722:HG3_PB_SVrefine2PBcRDovetail_9249:HG2_PB_SVrefine2PB10Xhap12_13803:HG2_PB_SVrefine2PB10Xhap12_13802;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13803:HG3_PB_SVrefine2PBcRDovetail_9249;NumExactMatchSVs=2;ClusterMaxShiftDist=0.148607;ClusterMaxSizeDiff=0.148607;ClusterMaxEditDist=0.296063;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=306;DistBack=1873;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=328;REFWIDENED=20:61617751-61618078;PctSeqSimilarity=0.9325;PctSizeSimilarity=0.862;PctRecOverlap=0.2592;SizeDiff=-49;StartDistance=-239;EndDistance=-239;GTMatch=0;TruScore=68;MatchId=3272.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:0:11:1:15:1/1:0:11:0:8:./.:0:1:./.:1:6:.:.:.
chr20	61680415	HG2_PB_SVrefine2Falcon1plusDovetail_7133	A	ACTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCTTCCTCCTCCTCCTCCTCTTCCTCTTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTTCTCCTCCTCCTCTTCCTCCTCTTCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTTCTCCTCCTCTTCCTCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCTCCTCTCCTTCCTCCTTCCTCTTCCTCCTCCTCTTCCTCTTCCTCCTCCTCTTCCTCTTTCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCGTCTTCCTCCTTCTCCTCTTCCTCCTCTTCCTCTTCCTCCTCCTCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCTTCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCTTCTTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCCTCCTCTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7133:HG2_PB_pbsv_18882:HG4_PB_pbsv_18817:HG3_PB_SVrefine2Falcon1Dovetail_11727:HG3_PB_pbsv_18562:HG2_PB_SVrefine2Falcon2Bionano_9333:HG2_PB_SVrefine2PBcRplusDovetail_6621:HG4_PB_SVrefine2Falcon1Dovetail_11753:HG2_PB_SVrefine2PB10Xhap12_13809;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7133;NumExactMatchSVs=1;ClusterMaxShiftDist=0.148202;ClusterMaxSizeDiff=0.148202;ClusterMaxEditDist=0.247713;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=714;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=265;REFWIDENED=20:61680416-61680680;PctSeqSimilarity=0.9889;PctSizeSimilarity=0.9944;PctRecOverlap=0.8637;SizeDiff=-4;StartDistance=-96;EndDistance=-96;GTMatch=1;TruScore=94;MatchId=3273.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:1:14:1:17:./.:3:15:4:22:0/1:2:9:1/1:3:47:.:4314:.
chr20	61789812	HG3_Ill_GATKHCSBGrefine_12140	A	AATAAATGGTGAATTGGTGGTGGATGGGTGGTGGATGACGGATAGGTGGTGGGTGGGTGGGTGGGTGGTAGATTGGAGGATGGATGGTGGTGGGTAGATTGTGGATGGGGATGGATAGTGGATGGATGATGAGTGGGTGGATGAGTAGATGGTGGATGGGGGATGAGTGACTAGATGGTGGATGGATGGTAGGTGGGTTGTGGATAGTGCATGAATGGTAGCTAGATGAGTGGATGGATGGTGGGTGGGCTGTGGATGGGTGGATGGGTGGGGGATGGGTGGATAGATGGTGGATGGTTGGTGGATGGTGGATGGATGGGGGATGGGTTGCAGATAGTGCATGGATGGTATCTAGGTGGGTGGACAGATGGTGGGTGGGCTGTGGATGGTGGATGGTTGGTGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11758:HG2_PB_SVrefine2Falcon2Bionano_9339:HG2_PB_pbsv_18891:HG4_PB_HySA_27174:HG2_PB_PB10Xdip_18610:HG2_Ill_breakscan11_4927:HG3_Ill_MetaSV_3093:HG3_Ill_GATKHCSBGrefine_12140:HG2_Ill_MetaSV_2950:HG4_Ill_GATKHCSBGrefine_12697:HG2_PB_HySA_34155:HG3_PB_pbsv_18572:HG2_PB_assemblyticsPBcR_15447:HG2_PB_SVrefine2Falcon1plusDovetail_7142:HG2_PB_SVrefine2PBcRplusDovetail_6628:HG2_PB_SVrefine2PB10Xhap12_13818:HG2_Ill_SVrefine2DISCOVARplusDovetail_7723:HG4_PB_pbsv_18825;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_MetaSV_2950:HG3_Ill_GATKHCSBGrefine_12140:HG3_Ill_MetaSV_3093;NumExactMatchSVs=3;ClusterMaxShiftDist=0.116129;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.301935;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=402;DistBack=-510;DistForward=2;DistMin=-510;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=134;REFWIDENED=20:61789804-61789937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:48:1/1:2:18:3:13:./.:13:248:23:328:1/1:0:14:1/1:2:36:.:.:.
chr20	61992745	HG3_PB_SVrefine2Falcon1Dovetail_11743	G	GGGAGGGGGAGCAGGGGAGGGGGGAGGAGGGGGAGCAGGGGAGTGGGAGGAGGGGGAGCAGGGGAGGGGGAGGAGGGGAGCAGGGGAGGGGAGGAGGGGAGCTGGGGAGGAGGAGGGGAGCTGGGGAGGGGGAGGAGGGGGAGCTGGGGAGGGGGAGGAGGGGAGCTGGGAGGGAGGAGGGGGGGAGCTGGGGAGGGGGAGGAGGGGAGCAGGGGAGGGGGAGGAGGGGAGCAGGGGAGGGGGGAGGAGGGGAGCTGGGGAGGGGGGAGGAGGGGAGCTGGGGAGGGGAGGGAGGGAGCTGGGGAGGGGGGAGGAGGGGGAGAGGGAGGGGAGGAGGGGAGCGGGGGGGGGAGGGGGAGCAGGGGAGGGGGAGGAGGGGAGCAGGGGAGGGAGGAGGGGGGCAGGGGGGGAGGAGGGGAGCTGGGGAGGGGAGGAGGGGAGCAGGGAGGGAGGAGGGGAGCAGGGGAGGGGAGGGGGAGGGGAGGGGGAGGAGGGGAGGGCAGGGGGGGGAGCTGGGGGAGGAGGGGGAGCTGGGGAGGAGGAGGAGGGAGCAGGGGAGGGGGAGGAGGGGGAGCAGGGAGGGGGAGGAGGGGGAGCAGGGGAGGGGGAGGAGGGGGAGCAGGGAGGGGAGGAGGGGGAGCAGGGGAGGGGGAGGGGGGAGCAGGGAGGGGGAGGAGGGGAGCAGGGGAGGGGGAGGAGGGGGAGCTGGGGAGGAGGGGAGCAGGGAGGGGGAGGGGGGGAGCAGGGGAGGGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13826:HG2_PB_PB10Xdip_18623:HG3_PB_pbsv_18587:HG2_PB_HySA_34177:HG2_PB_HySA_34176:HG2_PB_pbsv_18908:HG2_PB_SVrefine2PBcRplusDovetail_6633:HG2_PB_SVrefine2Falcon1plusDovetail_7150:HG3_PB_SVrefine2PBcRDovetail_9262:HG3_PB_SVrefine2Falcon1Dovetail_11743:HG3_PB_assemblyticsfalcon_15814:HG2_PB_SVrefine2Falcon2Bionano_9346:HG4_PB_pbsv_18840;NumClusterSVs=13;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11743;NumExactMatchSVs=1;ClusterMaxShiftDist=0.220483;ClusterMaxSizeDiff=0.220483;ClusterMaxEditDist=0.273024;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=754;DistBack=1476;DistForward=37;DistMin=37;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=49;REFWIDENED=20:61992746-61992794;PctSeqSimilarity=0.9401;PctSizeSimilarity=0.9008;PctRecOverlap=0.902;SizeDiff=-83;StartDistance=-38;EndDistance=-38;GTMatch=1;TruScore=91;MatchId=3276.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:48:1/1:3:23:1:11:./.:0:3:0:3:./.:0:5:./.:3:21:.:1178:.
chr20	62072497	HG2_10X_SVrefine210Xhap12_13219	T	TTTTTAGTAGAAACAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGTGCCCAGCCAGGAGGCATGTTTTTTAAGACTACTGCCATTCTCAACTTAACCACAGGACAGCAAGGGTTGAGGGGGAAGGCGGAAAACCAGGAGGGAGAGGATGGGGACTGAGACAGAGATAGAGACAGAGACAGAGAGATAGAGAGACAGAGACAGAGAGATAGAGATAGAGAGACAGAGACAAAGGCAGAGATAGAGACAGAGAGATAAAGAGACAGAGAGATAGAAAAACAGACAGAGACAGATAGAGACAGAGAGAGAGACAGAGAGACAGAGACAGAGAGATGGAGACAGAGATAGAAATACAGAGACTGAGAGACAAAAACAGAGCAATAGAGAGAAATAGAGACAGAGATAGAGACAGAAAAATAGATACTGAGAGAGAGAGACAGAGATAGAGAGATAGAGATAGAGAGAAATAGATACAGAGATAGAGAGACAGAGAGAGACAGAGACAGAGAGATACACAGGGACAGAGACAGAGACAGAGAGATACACAGAGACAGAGAGAGACAGAGACAGAGACAGAGAAAGAGACAGAGACAGATATGCAAAGAGATAGAGAAACAGAAACAGAGATAAAGACAGAGACAGAGAGATACACAGAGACAGAGAGATACAGACAGAGAGATATGGACCTGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCTGGTGGATCGCTTGAGCCCAGGAGTTCAAGACCAGCCTGGCCAATATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGTGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGGGGCAGGAGAATCACTTGAGCCCGGGAGGTTGAGTCTGCAGTGAGCTTTGACTGCACCATTGCACTCCAGCATGGATGATAGAGCAAGATCCTGCCTCAAAAAAAAAAGAAAAGAGAGAGAGACAGACAGAGAGACAGAGATGGCAGAGAGATGGGCGGGGCAGTGAGACATGGACCCTGGCCAGAATGTTGTAGGGGACAGGGGAGTCGAAAGAAGCCAGAGAATCTCGGAGCAGCTTCTGAGCCCGGGTCCCACTGAGGGCCAAGTCTGTGGAAGGGGGCCAGGCCCTGCACCCCTCCCCAGGGGGGTCAGATGGATGGGACACTTTCACACACAGCTCTCCAAAAATTTCTGCCCCTGAAATGTTCTCAGCTAGACATCCGAACTGCTCCTTCAAAGTGGAGGCCAAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_18624:HG3_PB_pbsv_18592:HG4_PB_pbsv_18845:HG2_PB_pbsv_18913:HG4_PB_SVrefine2PBcRDovetail_9520:HG3_Ill_MetaSV_3096:HG4_Ill_MetaSV_3049:HG4_Ill_GATKHCSBGrefine_12702:HG3_Ill_SVrefine2DISCOVARDovetail_13299:HG2_PB_SVrefine2PBcRplusDovetail_6637:HG2_PB_SVrefine2PB10Xhap12_13831:HG2_PB_SVrefine2Falcon2Bionano_9349:HG2_Ill_SVrefine2DISCOVARplusDovetail_7731:HG2_10X_SVrefine210Xhap12_13219:HG4_Ill_SVrefine2DISCOVARDovetail_13114:HG3_Ill_GATKHCSBGrefine_12151:HG2_Ill_GATKHCSBGrefine_12298:HG3_PB_SVrefine2Falcon1Dovetail_11747:HG3_PB_SVrefine2PBcRDovetail_9265:HG2_PB_SVrefine2Falcon1plusDovetail_7153;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13219:HG2_Ill_SVrefine2DISCOVARplusDovetail_7731:HG2_PB_SVrefine2Falcon2Bionano_9349:HG2_PB_SVrefine2PB10Xhap12_13831:HG2_PB_SVrefine2PBcRplusDovetail_6637:HG3_Ill_SVrefine2DISCOVARDovetail_13299:HG4_Ill_GATKHCSBGrefine_12702;NumExactMatchSVs=7;ClusterMaxShiftDist=0.125237;ClusterMaxSizeDiff=0.124242;ClusterMaxEditDist=0.211006;PBcalls=11;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1343;DistBack=-1433;DistForward=1401;DistMin=-1433;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=20:62072498-62072498;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:87:1/1:0:24:0:25:./.:0:4:0:7:1/1:0:34:1/1:5:263:.:5543:.
chr20	62081874	HG3_PB_SVrefine2Falcon1Dovetail_11750	A	AGAAGACCTGCTGGGGGGTGGGGAAGACTGCTGGGGGTGGGGGGAAGACCTGCTGTGGGGAGGGGGAAGACCTGCTGTGGGGTGGAAGACCTGCTGTGGGGTAGGGGAAGACCTGCTGTGGGGTGGGGGGAAGACCTGCTGTGGGTGGGGAAGACTGCTGTGGGTGGGGGAAGACCTGCTGTGGGGTGGGGGGGAAGACCTGCTGTGGGTGGAAGACCTGCTGTGGGGTGGGGAAGACCTGCTGTGGGGTGGGGGAAGACCTGCTGTGGGGTGGGGGAAGACCTGCTGTGGGGTGGGAAGACTGCTGGGGTGGGGAAGACTGCTGGGTGGGAAGACCTGCTGGGGGTGGGGAAGACCTGCTGTGGGGTGGGGGAAGACCTGCTGTGGGTGGGGGAAGACTGCTGGGGGTGGGGGGAAGACCTGCTGGGGTGGGGGAAGACCTGCTGTAGGGTGGGGGAAGACCTGCTGGGGGTGGGGGGGAAGACCTGCTGTGGGGGGGGGAAGACCTGCTGTGGGGTGGGGGAAGACCTGCTGTAGGGTGGGGGAAGACCTGCTGGGGGTGGGGAAGACCTGCTGGGGGTGTGGGAAGACCTGCTGGGGGAGGGGGAAGACCTGCTGTGGGGTGGGGAAGACCTGCTGTAGGGTGGGGGAAGACTGCTGGGGGTGGGGGAAGACCTGCTGTGGGGTGGGGGAAGACCTGCTGTAGGGTGGGGGAAGACTGCTGGGGTGGGGGGGAAGACCTGCTGTGGGGTGGGGGAAGACCTGCTGTGGGGTGGGGGAAGACCTGCTGTAGGGTGGGGGAAGACCTGCTGTGGGGTGGGGGAAGACCTGCTGTGGGGTGGGGAAGACCTGCTGTAGGGTGGGGGAAGACTGCTGGGGGGTGGGGGGAAGACCTGCTGGGTGAGGGGGAAGACCTGCTGTGGGTGTGGAAGACCTGCTGTAGGGTGGGGGAAGACTGCTGGGGGGTGGGAAGACCTGCTGTAGGGTGGGGGAAGACTGCTGGGGGTGGGGGAAGACCTGCTGGGGGTGGGGGAAGACCTGCTGGGGGGTGTGGGAAGACTGCTGGGGGTGGGGGAAGACCTGCTGGGGTGGGGGAAGACCTGCTGGGGGGGGGGAAGACCTGCTGGGGGGGGGAAGACTGCTGCTGTGGGTGTGGGAAGACCTGCTGTAGGGTGGGGGAAGACTGCTGGGGGTGGGGAAGACCTGCTGGGGGTGGGGGAAGACCTGCTGGGGGTGGGGAAGACCTGCTGGGGGAGGGGGAAGACCTGCTGGGGGTGGGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9352:HG4_PB_pbsv_18848:HG3_PB_assemblyticsfalcon_15828:HG2_PB_SVrefine2PB10Xhap12_13833:HG3_PB_HySA_28172:HG2_PB_SVrefine2PBcRplusDovetail_6638:HG2_PB_SVrefine2Falcon1plusDovetail_7154:HG3_PB_SVrefine2Falcon1Dovetail_11750:HG4_PB_SVrefine2Falcon1Dovetail_11772;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11750;NumExactMatchSVs=1;ClusterMaxShiftDist=0.268624;ClusterMaxSizeDiff=0.268624;ClusterMaxEditDist=0.290642;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1280;DistBack=4445;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=67;REFWIDENED=20:62081875-62081941;PctSeqSimilarity=0.9731;PctSizeSimilarity=0.9531;PctRecOverlap=0.9538;SizeDiff=-63;StartDistance=-27;EndDistance=-27;GTMatch=1;TruScore=96;MatchId=3278.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:75:1/1:0:25:0:26:./.:1:1:0:1:./.:1:2:0/1:7:42:.:5543:.
chr20	62425017	HG3_Ill_Spiral_18966	T	TAGAAGCAGAGGCTACCTCACAACGGTCCACACCTCCACGTAAGATTTCAC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13231:HG3_PB_HySA_28195:HG2_PB_HySA_34201:HG3_Ill_svaba_23259:HG3_PB_pbsv_18622:HG3_Ill_scalpel_17762:HG3_Ill_Spiral_18966:HG3_Ill_Krunchall_24408:HG3_Ill_GATKHC_29439:HG3_Ill_GATKHCSBGrefine_12160:HG3_Ill_250bpfermikitraw_23848:HG3_Ill_150bpfermikitraw_23142:HG2_Ill_svaba_23039:HG2_Ill_SpiralSDKrefine_10019:HG2_Ill_Krunchall_24888:HG2_Ill_GATKHC_29544:HG2_Ill_GATKHCSBGrefine_12308:HG2_Ill_250bpfermikitraw_24541:HG2_Ill_150bpfermikitraw_23111:HG3_PB_SVrefine2PBcRDovetail_9281:HG3_PB_SVrefine2Falcon1Dovetail_11765:HG3_Ill_SVrefine2DISCOVARDovetail_13309:HG2_PB_SVrefine2Falcon2Bionano_9366:HG2_PB_SVrefine2Falcon1plusDovetail_7168;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23111:HG2_Ill_250bpfermikitraw_24541:HG2_Ill_GATKHCSBGrefine_12308:HG2_Ill_GATKHC_29544:HG2_Ill_Krunchall_24888:HG2_Ill_SpiralSDKrefine_10019:HG2_Ill_svaba_23039:HG3_Ill_150bpfermikitraw_23142:HG3_Ill_250bpfermikitraw_23848:HG3_Ill_GATKHCSBGrefine_12160:HG3_Ill_GATKHC_29439:HG3_Ill_Krunchall_24408:HG3_Ill_Spiral_18966:HG3_Ill_scalpel_17762:HG3_Ill_svaba_23259;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0943396;ClusterMaxSizeDiff=0.0754717;ClusterMaxEditDist=0.226415;PBcalls=7;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=50;DistBack=-90;DistForward=48;DistMin=-90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=20:62425009-62425110;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3283.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:37:0|1:31:3:3:31:1|0:0:13:10:0:0/1:37:37:./.:.:.:.:.:.
chr20	62485053	HG3_PB_SVrefine2Falcon1Dovetail_11767	T	TTCACCCTCCTGGTCCCGGCCTCCACTCAGGTGAGCCACCCTCACCCTCCTGCTCCCCGTCTCCACTCAGGTCATCCACCCTCACCCTCCTGGTCCCTGTCTCCACTCAGGTCATCCAACC	20	PASS	ClusterIDs=HG3_PB_HySA_28199:HG2_PB_SVrefine2Falcon2Bionano_9369:HG2_PB_pbsv_18945:HG2_PB_SVrefine2Falcon1plusDovetail_7169:HG3_PB_SVrefine2PBcRDovetail_9283:HG3_PB_SVrefine2Falcon1Dovetail_11767:HG3_Ill_250bpfermikitraw_23850:HG2_PB_HySA_34207;NumClusterSVs=8;ExactMatchIDs=HG3_Ill_250bpfermikitraw_23850:HG3_PB_SVrefine2Falcon1Dovetail_11767:HG3_PB_SVrefine2PBcRDovetail_9283;NumExactMatchSVs=3;ClusterMaxShiftDist=0.125523;ClusterMaxSizeDiff=0.108787;ClusterMaxEditDist=0.1841;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=120;DistBack=3823;DistForward=90;DistMin=90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=289;REFWIDENED=20:62485054-62485342;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:1|0:0:13:15:2:./.:0:0:3:0:0/1:9:2:./.:.:.:.:.:.
chr20	62504401	HG3_PB_pbsv_18627	T	TAAAGTGAGCCGACGGCGCGCGCGGTGGGCTCACGCCTGTAATCCCAGCAGGCTTTGGAGGCCGAGGCGGGTGGATCATGAGGTCGGGAGATTCGAGACCATCCTGGCTAAGCAAGGTGAAAACCCCCGTTCTCTCGCTAAAAATACAAACAAAATTAGCCGGCGCGTGCGGGCGGGCTGTAGTCACCAGCTACTCGGGGGCTTGAGGCAGGAGACATTGGCGTGAATCCCTCGGGTGAAATGCGGGAGCTTGCGAGTGAGAGCCGCGGATTGGCGGCCACTGCAGTCCGCAGTCCCGCCTTGGGCGACCAGAGCTGGAGAATCTCCCCGCTCCAAAAAAAAAAAAAAAACAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_28200:HG3_PB_pbsv_18627:HG2_Ill_breakscan11_4929:HG3_PB_SVrefine2PBcRDovetail_9284:HG3_Ill_MetaSV_3099:HG2_PB_SVrefine2Falcon2Bionano_9370:HG2_PB_pbsv_18946:HG2_PB_HySA_34208;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_18627;NumExactMatchSVs=1;ClusterMaxShiftDist=0.105572;ClusterMaxSizeDiff=0.105572;ClusterMaxEditDist=0.193182;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=358;DistBack=17713;DistForward=6511;DistMin=6511;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=20:62504402-62504405;PctSeqSimilarity=0.9203;PctSizeSimilarity=0.9218;PctRecOverlap=0.922;SizeDiff=28;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=3286.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:./.:21:6:10:15:./.:2:2:29:0:0/1:34:10:0/1:16:7:.:.:.
chr20	62697236	HG2_Ill_250bpfermikitraw_24544	A	AAGTTTGGCCTCAGCTCGGGACACTGATGTTCCCGGGTTGGCCCTTCATGAG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7744:HG3_PB_HySA_28209:HG2_PB_pbsv_18954:HG3_Ill_svaba_23265:HG3_PB_pbsv_18634:HG3_Ill_Krunchall_24411:HG3_Ill_GATKHC_29449:HG3_Ill_GATKHCSBGrefine_12162:HG3_Ill_250bpfermikitraw_23852:HG3_Ill_150bpfermikitraw_23146:HG2_Ill_svaba_23043:HG2_Ill_Krunchall_24892:HG2_Ill_GATKHC_29552:HG2_Ill_GATKHCSBGrefine_12313:HG2_Ill_250bpfermikitraw_24544:HG2_PB_HySA_34215:HG3_PB_SVrefine2PBcRDovetail_9290:HG3_PB_SVrefine2Falcon1Dovetail_11774:HG3_Ill_SVrefine2DISCOVARDovetail_13315:HG2_PB_SVrefine2Falcon1plusDovetail_7176;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24544:HG2_Ill_GATKHCSBGrefine_12313:HG2_Ill_GATKHC_29552:HG2_Ill_Krunchall_24892:HG2_Ill_svaba_23043:HG3_Ill_150bpfermikitraw_23146:HG3_Ill_250bpfermikitraw_23852:HG3_Ill_GATKHCSBGrefine_12162:HG3_Ill_GATKHC_29449:HG3_Ill_Krunchall_24411:HG3_Ill_svaba_23265;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0917431;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.27027;PBcalls=7;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=-85;DistForward=9189;DistMin=-85;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=102;REFWIDENED=20:62697233-62697334;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3287.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:25:1|0:4:22:27:2:./.:3:1:5:0:0/1:23:21:./.:.:.:.:.:.
chr20	62709530	HG2_PB_SVrefine2Falcon1plusDovetail_7177	C	CCCAATACCCCCGAGGCCTGGGCATGCAGAGGCCACTGCCCTGGCCCAAGTCTGGGGCAGGTGCAGCATCCCCTGGGACCTTGGCCCCTCACCACCGGCCCAGTT	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_12314:HG2_10X_SVrefine210Xhap12_13241:HG3_PB_pbsv_18635:HG2_PB_pbsv_18955:HG3_PB_HySA_28210:HG2_PB_HySA_34216:HG3_Ill_SVrefine2DISCOVARDovetail_13316:HG3_Ill_GATKHCSBGrefine_12163:HG2_PB_SVrefine2Falcon1plusDovetail_7177:HG2_Ill_GATKHC_29553;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12314:HG3_Ill_SVrefine2DISCOVARDovetail_13316:HG3_Ill_GATKHCSBGrefine_12163:HG2_PB_SVrefine2Falcon1plusDovetail_7177:HG2_Ill_GATKHC_29553;NumExactMatchSVs=5;ClusterMaxShiftDist=0.136986;ClusterMaxSizeDiff=0.136986;ClusterMaxEditDist=0.181818;PBcalls=5;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=104;DistBack=3073;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=104;REFWIDENED=20:62709531-62709634;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3288.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:./.:8:14:18:6:./.:0:16:2:0:0/1:28:18:./.:.:.:.:.:.
chr21	15811801	HG2_PB_PB10Xdip_18755	C	GTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATAACAGGCGTGAGCCACCGCGCCCGGTCGAAATGGTGGCATTCTTTTACGTTGGCATGAGATAGGAATGTTTATATTTAATTTGTGAACCCCAAAATGTGATCTTGAAGCAAAGATTGATAGCAATGGAAGTAGCAGGTGAAATCACCTGCTGGAGCTCTACCTGATGCCCCTTCAACTAATGCACCATAAAAATTCTCATCCTCTTCTTAGTCAGATCTAGAGGGAAACCCACTTCACTACGTTGTCTGAATGTGACTTGCAGTGAACTAAAAAAAATATGAAATTCTCATCCTTCGTTTAAGATAAGTTCCTCATTGAAAAGAACTAGGAAATAGTATATCAATCTTCAATCATTTGAACAAAATGTTCATGATGGTAAATAGGAGGTCTTCTTGAATCATCCCGATAACTTCTTCAGGATTCCACTTCTTGTTATGATGACTGGGCATCTCACATTGCATCTGTTTTGAGATTGTCACCAAACTAAATAGGCATGAGAACGACTATAGTAGAGGGAAGCAAATTCTTTGTGTTAACAGTTGTTACCTGTTTTGCTAAAATCAGTAGCAGAAGGATTGTGATGAGGTTATTTAACTGGACAGTGAATAGGTCTCATTAGGCTAGAATTTTGTAAGGGGTTCTGCTTACTTGGTTTTACTTCCTTTGGCCAATAGATTAGTGATTCTAATAGCCAGCAATGGTCTACCTGATCTGGGTAGCTACCTAGAAATATGATTGCAGAGATTCTTTAACTTAAGATTTTACAATATTATACAAATATATTTCTGTGAATAACTGAGTCCACATTTTCTATATACAGTTTTTTATTACATGCAAAAATTTTAAATCACTCATAATCTCAGCATTTTTAACCACTAAAAAATTAGTTTACCTACTTTCATTCTCCTTCAACTCCACATCACTGTAATCACTGTAAATTATTTTATGAGTATATATTTCCTGGGTTTTAATTTTATTTTGTTTTAAATTGACAGGTAATAATTGTACATATTAATGGGGTACAGAGTGATGTTTTGATACATGTATACATTATGTAATGAGCAAACCAGGATAATTAGCATATCCATCACCTTGAACACTTGTCATTTCTTTGTGGTAAGAATATTCAAAATTCCCTCTTCTAACTATTTTGAAATATACGGTACATTATTTTTTAACTATAGTCATCCTACTGTGCAATAGAACACCAGAACTTACTCCTTCTATCTAACTGTAACTTTGTGCGTGTTGACCAACCTCTCCCCATTCTTCCCTCTCCCCTGTTCTCCCCAGCCTCTGGTAACCACCATTCTACACTTTACTTCTATAAGATCAGCTTTTTAAAATTCCACATATAAGTTAGATCATGTGGTATTTGTACCTCTGTGCTTGGAAACTTTTATTTAACATAACGTTCTCTAGGTTAACTATGTTGTTGCAAATGACAGGATTTCATTATTTTTTATGGCTGGATAGTATTCCATTGTGTACATACACCCATTTTTTAATCCATTCATCCATTAATGAACACTTAGGTTGTTCCTATATTTTGCCTATTGTGAATAATGCTGCAATAAACATGGGGGTGCAGATATCTCTTCAACATATTGATTTCATTTCCTTTGGTTATATACCCACAATAGGGGTTGCTGGGTCTTAGTGTAGTTCTGTTGTTAATTTTTTAAGAAAACTCCATGCTGTTTTCCATAATGCCTGCTCCAATTTACCTTCCCACCAACAGTGGCTAAGTGCTCTCCTTTTTCTACATCCTCACCAACATTTGTTATTTTTTTTATCTTTTTGATAGTCACTATTCTAACTGGGGTATGGTGACATCTCATTGAGGTTCTGATTTGCATTTTCCTGATGATTAGTGATATTGAGCATATTTTCATACACCTGTTGTCATTTGTATGTCTTCTTTTGAGAAATCTCTCTTCAGATCTTTTGCCCATTTTCAAAGTGAATTTATTTATTTCCTTTTCTGTTGAGTTGTTTGAGTTTCATATATATTCTGGATCTTAACCGCTTGTCAAATGCATAGTTTGTGACTATTTTCTTTCATTCTGTAGGCTATCTCGTCAACTCTGTTTATTGAGGTTTTGCTGTGTAGAAGCCTTTCAGTTTGATGTAATCCCATGTGTGCCTATTTTTACTTTGTTTTCTGTGCTTTTGAGGTCTTACTCCAAAAATTCCTTGCCCAAGCCAATGTCATAAGCATTTATCCAATTTTTTCCTCTAGTAGTTTTATAGTTTCGGATCTTACATTTAAGTCTTTAGTCCACTCTGAGTTGACTTTTGTTAAGTGGTGAGAGGTAGGAGTCTAGTTTCATTCTTCTGCGTGTTTAGATTCAGTTTCCCAGCACCATTTATTGAAGAAACTGTTCTTTCCCCAGTGTGTGTTCTTGGCACCTTTATTGAAATTCAGTTGGCTTAAATGTGTGAATTTTTTTCTGGATAGTCTATTAATTTTTGTATTCATTGTAGAGACGGGGTTTTGCTATGTTGCTCAGGAGGGTCTCGAACTCCTGGACTCAAGCAATTTGCCTGCCTCAGCCTCCCAAAGTGCTGGGACTACAGGTGTGATCCACTGTGCCTGGCCTATAGTTTTTATTGTAGAGACCTTTCACCTCCTTGGTCAAATTCATTCATCGGTATTTTGTTGGTTTTATAGCTATTGTAAATGGGATTCTGTTCTTGATTTCTTTTTTTAGAAAATTCGTTGTTGGCATATAGAAACATTACGGATTTTTGTGTTTATTATGTATACAGCAACTTTACTGAATTTGTTTATTAGTTCCAGTAGTTTTTTGGTTGATTCTATAGGTTTTTTTATAATTAAGATCATGTCTTCTGCAAACAGAGACAACTTGACTCTCAATTTGACAATTGAGGAGCATGTCATTTAATTTCCATGTAGTTGTACAGTTTCCAAAGTTCCTAATGTTATTGATATCTAGATTTTTTTCCCTTGTGGTCAGAAAAGATACTTGATATGATTTTGATTTTTAAAAATTTGTGAAGACTTTTTTGTGGTCTAACATATGATCTGTCCTCGAGAATGAGAGTATTTCATTTGCTGTTGATTCTTCTTTTGTTTTTTTCTTCTTCCGTTCATTCTTTTCACCTTTTTAGTTTTCTTGCCTAATTGCTCTAGCTAAGACTACTAGTACTACATTGAATAGAAGTGGTGAAAACGAACATCCTTGTCTTGTTCCAGAATTTAGAAGTAAAGCTTTTAACATGTTTCCAGTCAGTAAGATGTTAGCTCTGGGTCTTTCCATATATGGCCTTATAGTGTTGAGGTACATTCCTTCTGTAACTAATTTGTTTAGGGTTTTTCTCATAAAGGAATGCTAAATTTTATTGAATGCTTTTTCTTTGTCTATTGGGATGATCATTTGGTTTACTTCCTTCATTCTGTTGATGTGATATATCACATTTATTTGATTTTCATACGTTTGAACATTCTTGCATCCCTGAGTTGAATCCTATTTGATCATGGTGAATGATCTTTTCAATGTGCTGTTGGATTCAGTTTGATAATATTTTGTTGATGATTTTTAAATTCATTTTCAACAGGAATATTGACCTGTAGTTTTCTTTTTTTTTTCTTGTGTCCTTGTCAGATTTTGGTATCAGAGTAATAATGGCCTTGGAGGATGAATTTGGAAGAATTCTCTCCAATTTTTCTTCATGGTTTGAGAAGAATTGGCATTTGTTCTTTAAATATTGGTAGAATTTGGCAATGAAATCATTCAAACCTGGGCTTTTATTTGATGGGAGGCATTTTATTACTAATTCAATTTAGTTACTTGTTATTGGTCTGTTCAGGCTTTCTATTTCTTTGTGATTCAATCTCAGTAGTTTGTATGTGTCCAGGAAATTGTCCATTTATGTCAGGTTCTCCAATTTGTTGATGGTTAGTTGTTCATAATTGTCTCTAATGATCTTCTGAATTTCTGTAGTATTGGTTGTGATGCCTCCTGTTTCATCTCTTATTTTATTTATTCAAGTAGCCTTTTTCCTTAATTGGCATAGCTAAGGGTTTGTCAATTTTGTTAAAAAAGCAACTACTCATTTTATTGATCTTTTGTATTTTTTTAGTCTCTATTTTGTTTATTTCTGGTCTAATCTTTATTATTTCTTTCCTTCTATTTTTGAAGTTAGTTTGTTCTGGCTTTTCTAGTATTTTGAGATGAAACATTATGTTATTTGAAATATTTCTACATTTTGATGTAGGCATTCATTGCTAAAAACTTTCTTCTTAGAACTGTTTTTGCTGTATCTGATACATTTGTGATATATTGTGTTTCCATTTTCATTTGACTCAAGAATTTTTTTAATTAAAAATAAAATAAAATGTCTTAATTAAAAAATTTTTAAATTAACACACTAGTTATTGAGGAGCTTGTCATTTAATTTCCATGTAGTTGTACAGTTTCCAAAGTCCCTAATGTTATTGATATCTAGATTTTTTTCCCTTGTGGTCAGAAAAGATACTTGATATGATTTTGATTTTTAAAAATTTGTGAAGACTTGTTTTGTGGTCTAACATATGATCCGTCCTCGAGAATGAGAGTATTCCATTTGCTGTTGAGAAGAAGGTGTATTCTGTGGCTGTTGGATGGAACACTCTATAAATGTCTGTTAGGTCCATTTGGACTAGAGTGTGGTTTAACTGTACTGTTTTCTTGTTCAATTTTTGTCTAGATCACCTGTCCATTGCTGGATTTAGGTTGTTGAAGTTCACTACAATTATAGTATTACAGTCCTTATCTCCTTTTAGGTCTGTTAACATTTGCTTTATATATTTATTCTTCAACATAAGAAAACATTTTATATTGGGTGAATATAAAATTGTTATATCCTCTTGCTGTATTTACCCCTTTATAATTATATTATGGCCTTCATTGTTTCTTTTCACAGTTTTTGTTTAAGGTCTCTTTTTTTCTGATGTAAGTATAGCTGCTCCCACTTTCTTATGGTTTTCATTTGCATAGAATATCTTTTTTTCTATTCCTTCACTTTCAATCTATGTATCCTTACAGGTGAAGTGAGTCTCTTAGGGACAGCATATAATTGGGTATTGTTTTCTTCTCCATTCAGCCCCTCTGCTATAGTTTGGATACTTGACCCTCCAAAAATCATGTTGAAATTTGATCCCTAATGTTAGAGTGGAGCCTACTGGGAGGTGTTTGGGTCATGGAGGTGAAATGCCTTCCCTGGCATTGGGGTGTGTATGAGTTTTCATTCTGTGAATTCCCATAAGGGGTGGTTGTTAAAAAGAGCCTGGTACCTCCCCTTTCCCTCACTTTGCTCTTGCTGTGTGATGTCTGCACATGCTAGCTCCCATTTGCCTTCTGCCATGAGTGGAAGCAGTTTGAGGCCCTCATCAGAAGCAGATATCGACCCTATGCTTCTTGTACAGGCTGCAGAACAGTGAGCCAAATAATCCTCTTTTAAAATTACCTACCCTAAAGTATTGCTTTATAGCAACAAAAACAAACTAAGACACCTTCTATCTCTGTTAATTGGAGATTTACTTTGAATGCAAAGCCTATTTACATTCAAGGGAATTATTGATAGGCAAAGTCTAACTACTGCCACTTTGTTACTTATTTTCTAATTGTTTTGTAGGTTCCTTTTTTCTTTCTTCCTCTCTTACAGTCTTCTTTTGAGGTTGAGTGATTTTCACTAGTTGTATGTTTTGATTCCTTGCTTTTTTATTTTTAGTGTATCTTTTATAGGTTTTTGCTTTGTGGTTACTGTGAGGCTTTCAAATGCCAAGCTATAGTTATGGCAAGTTACTTTAAAATGATAACAACTTAACTACAATTGCAAAGAAAAAAAAGGAATAAAAAAAGCTGTACATTTTAACTACATTCTCATCCCAAATTTTGAATTTTTATTATCATAATTTCAATTTTTATATTGCCTGTTTCTTAATGAATTATTATAATTATTAATTTTGATAATTTTGTCTTATAGTTTTATACTAAAGATATGTGTTTTCAGAATCATAAGTTATCTATTATTGCAGTATTTGAATAACAATCATGGTACCATCAATTTCCTTTGGTTTGTAGAACTCTCTGTAGCATTTTTCATAGGACAGGTCTGGTAGCAATAAGTTTCCTCAGTTTTTGTTTGTCTGGGAATGTCTTTATTTCTCCTTCATTTTTGAAGCTTACTAGGTAAAATATTTTTGGTTGACAGTTGTTTTTATTCAGCATTCTGAATATATTATCGTATTATCTTCTGGCCTGCAAGATTTCTGCTGAGAAGTCTTCTGCCTGGCATATTAGATCTCCATTATATGCTATTTGCTTCTTTTTTCTCACTGCTTTCAGGAATCTTTTTTTGTTTAGACCTTTGAGAGTTTGATTATAATGTATCTTAGAGTATTCTTATTTGGGTTGAATCTAATTAGTGACCTATGATCTTCCTAACCTGAATAATTTTATCCTTCTACAGATTTGGGAAATTTTGTGCTATTATTTCTTTGATTTATCATTCCACCCCTTTGTCTTTCTCATTTTCCTTTTTAACTTAATTAACCCAAATATTTGCTCTTTTGATGTAGTTCCATAGATCCTATATGCTTTCTGTGTTCCGTTTTGTTTTTTTCTCTTTTATTGTCTATGTATTTTCAAATATGCTTTCTTTGAGCTTACTGACTCTTTCTTCTGTTTGATCAATTCTGCTGTTCATGGTCTTTATTACATTTTTCATTTTATTCATTGTATTTTTGGCTCCAGGATTTCTGTTTGGTGTTTTTATTATTTTAATCTCTCTGTTAAGTTTATGTTAAATTTCTGATTTTTTTGTTTTACTGAATTTTGCTGAGCTTCCTTAAAACAGCTATTTTGAATTCCTTGCATAAGAGATCGCACATCTCCATCACTGTAGGGTCTGTTATTGGTGTTTTATTTTGTCATTTTGATGAGGTTACATTTTCCTAAATGGTCTTGTTGCTTATGGATGTGTGATGATATCTGCCCATTGAAGATTGTGTTATGTTTCCTGAGTTCGTAACCACTGCAGCTATCTCAACACTAGAGGATGCTCTAAGCCCAGATTTGCCATGAGTTGCATGAGGATGCCAAGGATGTGGTGACTCTGGCAGGGATGAATCCGAGGAAGGTCCAAGAAGGTACCCAGGCTGTGAGGGAAAGCTAACCAGGAACCAGAAGACGAAGAGATGCCTTCCAGCAGATCCCTACACACGCAGGATAGGTTTTTGACTGTAGCCTAAATAAGCATGCCTTCCAGCAGATCCACATGCAGGATAGGTTTTTTTACCGTAGCGAGAGGAGCTGGAGCTGAGACTGGGTCCCCTTGGGATCTCCTGTGGAAGGGTGGGAGGTGAGCTCATTTTGTTATCTCAGAGAGGCATGTCTTGAATTTTTGTTAATTGGCTTCCTTTTTACTCTCTCTAGCCTTTTCTTGTAGAAATCATACTGTATGAATGTTGGGCTCTTGGGAATTTTTCTCTGTCTCTTGATGGTTTATTTTCTGTTTTGAAACTGTATTTATTTTCTATGTGTTCTGGGAAAATTCTCCCATCTTCTCTTCCAACTCACTGATTTTCTTTTCAGCAGTGGATATTTGGACTATATATTAAGTTTTTTTTTTAATTTTAGCAAATATACTTTGCTCTTTTTTCATAACCTTCTATGATACTTCCTACATAAAATATCGCCTGCATCACTTTGAGGATAATTATCTTTTCTGGTTACTTAACTATCAATACCTTTTGTGTGTTTTTTTTTTTCTCAGGGTGTTGCTTTTCATCAAAACTCATCTATGAACTGAGAATTTCTGCTGAACTGTCAGCAGCCAGCCTCAGAGGAAAGGTGGAATCACCTGCCAAGGGCTTATACTTCATATTGTTTTTAGTTAGAGTAAAGGGATGGGAGTAATGTCTCAGCAACTGGTTTTCTGACTCTAATTTCTTTTCTCTTTTTTTTTTGGACATGAAAATGGGTTTATTTATTTATTTTTATTTTATTATTATTTATTATACTTTAAGTTTTAGGGTACATGTGCACAACGTGCCGGTTTGTTACATATGTACACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCATCCCCCACCCCACAACTGTCCCCGGTGTGTGATGTTCCCCTTCCTGTATCCATGTGTTCTCATTGTTCAGTTCCCACCTATGAGTGAGAACATGCGGTGTTTGGTTTTTCGTCCTTGAGATAGTTTGCTGAGAATGATGGTTTCCAGCTCCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCTATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCACTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCACAATAAACATACGTGTGCATGTGTCTTTATAGCATCATGATTTATAATTCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCACAATGGTGGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCGTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTCTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTCACCCACTTTTTGATGGAGTTGTTTGTTTTTTTCTTGTGAATTTGTTTGAGTTCATTATAGATTCTGGATATTAGCCCTTTGTCAGGTGAGTAGGTTGCAAAAATTTTCTCCCATTCTGTAGGTTGCCTGTTCACTCTGACGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATGCCATTTGTCAATTTTGGCTTTTGTTGCCATGCTTTTGGTGTTTTAGACATGAGGTCCTTGCCCGTGCCTATGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACATCTAAGTCTTTAATCTATCTTGAATTAATTTTTGTATAAGGTGTAAGGAAGGGATCCGGTTTCAGCTTTCTACATATGGCTAACCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTTTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGCAGTATAGTGTGAAGTCAGGTAGCATGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGGAATGCGGGCACTTTTTTGGTTCCATATGAACTTTAAAGTAATTTTTTCCAATTCTATGAAGAAAGTCATTGGTAGCTTGATGGGGATGCATTGAATCTATAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATCTCAATGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGTTCCTTCACATCACTTGTAAGTTGGATTCCTAGGTATTTTATTCTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTGTCTGTCTGTTATTGGTGTATAAGAATGCTTGTGATTTTTGCACATCGATTTTGTATCCTGAAACTTTTCTGAAGTTACATATCAGCTTAAGGAGATTTAGGGCTGAGACAATGGGGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGTACAATTTGACTTCCTCTTTTCCTAATTGAATGCTCTTTATTTCCTTCTCCTGCCTAATTGCCCTGGCCGGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATACTTCTAGTTTTTGTCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAGATACGTCCCATCAATACCTAATTTATGGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGATTCTGTTAATATGCTGGATTACGTTTATTGATTTTCATATGTTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATATGTTGCTGGATTTGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCAGTCTTTGTTATCAGGATGATGCTGGCCTCATAAAATGAGTTAGGGAAGATTCCCTCTTTTTCTATTGATTAGAATGGTTTCAGAAGGAATGGTACCAGCTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAACCCATCTGGTCCTGGACTATTTTTGGTTGGTAAGCTATTAATTATTGCCTCAATTTCGTAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGGGTGTATGTGTCGAGGAATTTATCCATTTTTTCTAGATTTTCTAGTTTATTCGCTTAGAGGTGTTTATAGTATTCTCTGATGGTAACTTGTATTTCTGTGGGATTGGTGGTGATATCCCCTTTGTCATTTTTTATTGCATCTATTTTATTCTTTTCTCTTTTCTTCTTTATTAGTCTTGTTAGTGGTCTATCAATTTTGTTGATCTTTTCAAAAAACCAGCTCCTGGATTCACTGATTTTTTGAAGGGTTTTTTGTGTCTCTATCTCCTTCAGTTCTGCTCTGATCTTAGTTATTCCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTCTCTAGTTCTTTTAGTTGTGATGTTAGGGTGTCAATTTTAGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTCAATGTGTCCCAGAGATTCTGGTATTTTGTGTCTGACTCTAATTTCTGCCTAGTCCCCCATGGGGTCATCACTCATCTGGGTTAACACTATGTTCCTTTGGCCCAAACACAATGTCCAATCCTGGAGACAAAGCCTACTGACATTACAGGGACATGACACACAAGGGTGTATGGTTGCAGAGTCAGCCAATGTGGATGCTCTCCTTGTAGTAACAAAGTAATCTTGTCAATTGAACCATGTTCTGCATAATAGTGAGAAGATTGCTGTTAGCATTTAACAATGTATTTAGAACATATTTCTAGGTGTTTTTTTCTGTGACTGCACAATATTCCATTCTATACCTGTATTATGATGTGTGTAATTACTCCCTGGTAGTTTTCAATTTTTTTTTTTTTCGAGATGGAGTTTCACCCTTTCACCCAGGCTAGAGTGAAGTGACACAATCTCAGCTCACTGCAGCCTCTGCCTCCTAGGTTCAAGCAATTCTCCTGCCTCTGCTTCCTGAGTAGCTGGGATTATAGGCACCCGCCGCCATGTCTGGCTAATTTTTGTATTTTTTTAGTAGAGATGGGGTTTCAGCATTTTGGCAAGGCTGGTCTTCAACTCCTGACCTCTGGTGATCCACCTGCCTTGGGCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACTGCGTCAGGCCAAAAAGTTTTTTTTAGTAGAGATGGGGTCTCATTGTCTTGTCCAGGCTGATCTTGAAATCACCTCAAGCATGCCTTTCAGTTTGGCCTCCCAAAGTGCTGGGATTATAGTTCTGAGTCATTGCACCCAGCCCCTGGTAAATTTTTAAGTTGTTTCTAGTATTATGCTATTGTAAACAGCAATAGCATAATAGATATTTGACTAGATATTCTTGGCATCAGCTTTGTAGAATATATTCTTAGAAGTACAATTGCTGGGTCATAAAGCCTACACATTTTTAAACAATTTGTACTCCCATCAACAATGTAGGAGAGCATGTTCTTCCACTTTCAAATCAAACCTAACCTTTTTAATTTGCCAAGCTGATACAGGAAAAATGGTATCTGACTATTATATTGCCTTATATTGCTTCCATTATAAAAATTTTCTGTTATATTTCTTTCTAGTATGATTACAATTTTGTTGTTTTCACATTTACGTTTTTTGTTGTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAACGGCACAATCTCAGCTCACCATGACCTCTGCCTCCTGGGTTCAAGCGATTCTCTGGACTCAGCCTCCTGAGTAGCTGGAATTACAGGGATTCGCCACCATGCCCAGCTAATTTTGTATGTTTAGTAGAGACAGGGTTTCTCCAAATTGGTCAGGCTGGTCTCGAACTCCCGACCTCAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7245:HG2_PB_PB10Xdip_18755:HG4_PB_SVrefine2Falcon1Dovetail_11851:HG2_10X_SVrefine210Xhap12_13254:HG2_PB_SVrefine2PB10Xhap12_13899:HG2_PB_SVrefine2PBcRplusDovetail_6713:HG2_PB_SVrefine2Falcon2Bionano_9391:HG3_PB_SVrefine2PBcRDovetail_9328:HG4_Ill_SVrefine2DISCOVARDovetail_13146:HG4_PB_SVrefine2PBcRDovetail_9567;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_18755;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00206431;ClusterMaxSizeDiff=0.00206431;ClusterMaxEditDist=0.00675085;PBcalls=8;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=12599;DistBack=3060;DistForward=17022;DistMin=3060;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=280;REFWIDENED=21:15811576-15811855;PctSeqSimilarity=1;PctSizeSimilarity=0.9999;PctRecOverlap=0.9998;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3291.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:123:1/1:0:28:1:25:./.:2:4:1:8:1/1:2:41:1/1:0:957:.:12447:.
chr21	17937054	HG3_Ill_GATKHC_29613	T	TTGCTGTGTCGAAATCAAGCCAGTCAGGAAACTCATCCCACCCTTGATAACCAGAAGCAGTAATTCAGCAAAG	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4933:HG3_PB_pbsv_18711:HG2_PB_pbsv_19029:HG4_PB_pbsv_18957:HG2_PB_HySA_34306:HG4_PB_assemblyticsfalcon_15730:HG4_PB_SVrefine2PBcRDovetail_9572:HG4_Ill_svaba_23056:HG4_Ill_manta_4253:HG4_Ill_SVrefine2DISCOVARDovetail_13154:HG4_Ill_Krunchall_25355:HG4_Ill_GATKHC_29671:HG4_Ill_GATKHCSBGrefine_12767:HG4_Ill_Cortex_2139:HG4_Ill_250bpfermikitraw_24317:HG4_Ill_150bpfermikitraw_23389:HG3_PB_SVrefine2PBcRDovetail_9332:HG3_Ill_svaba_23355:HG3_Ill_manta_4077:HG3_Ill_Spiral_19051:HG3_Ill_SVrefine2DISCOVARDovetail_13343:HG3_Ill_Krunchall_24555:HG3_Ill_GATKHC_29613:HG3_Ill_GATKHCSBGrefine_12205:HG3_Ill_Cortex_2179:HG3_Ill_250bpfermikitraw_23994:HG3_Ill_150bpfermikitraw_23270:HG2_PB_SVrefine2PBcRplusDovetail_6718:HG2_PB_SVrefine2PB10Xhap12_13905:HG2_PB_SVrefine2Falcon2Bionano_9396:HG2_PB_SVrefine2Falcon1plusDovetail_7250:HG2_Ill_svaba_23125:HG2_Ill_manta_5008:HG2_Ill_SpiralSDKrefine_10088:HG2_Ill_SVrefine2DISCOVARplusDovetail_7756:HG2_Ill_Krunchall_25023:HG2_Ill_GATKHC_29704:HG2_Ill_GATKHCSBGrefine_12362:HG2_Ill_Cortex_5015:HG2_Ill_250bpfermikitraw_24682:HG2_Ill_150bpfermikitraw_23232:HG2_10X_SVrefine210Xhap12_13267:HG3_PB_SVrefine2Falcon1Dovetail_11829:HG2_PB_PB10Xdip_18760;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13267:HG2_Ill_150bpfermikitraw_23232:HG2_Ill_250bpfermikitraw_24682:HG2_Ill_Cortex_5015:HG2_Ill_GATKHCSBGrefine_12362:HG2_Ill_GATKHC_29704:HG2_Ill_Krunchall_25023:HG2_Ill_SVrefine2DISCOVARplusDovetail_7756:HG2_Ill_SpiralSDKrefine_10088:HG2_Ill_manta_5008:HG2_Ill_svaba_23125:HG2_PB_SVrefine2Falcon1plusDovetail_7250:HG2_PB_SVrefine2Falcon2Bionano_9396:HG2_PB_SVrefine2PB10Xhap12_13905:HG2_PB_SVrefine2PBcRplusDovetail_6718:HG3_Ill_150bpfermikitraw_23270:HG3_Ill_250bpfermikitraw_23994:HG3_Ill_Cortex_2179:HG3_Ill_GATKHCSBGrefine_12205:HG3_Ill_GATKHC_29613:HG3_Ill_Krunchall_24555:HG3_Ill_SVrefine2DISCOVARDovetail_13343:HG3_Ill_Spiral_19051:HG3_Ill_manta_4077:HG3_Ill_svaba_23355:HG3_PB_SVrefine2PBcRDovetail_9332:HG4_Ill_150bpfermikitraw_23389:HG4_Ill_250bpfermikitraw_24317:HG4_Ill_Cortex_2139:HG4_Ill_GATKHCSBGrefine_12767:HG4_Ill_GATKHC_29671:HG4_Ill_Krunchall_25355:HG4_Ill_SVrefine2DISCOVARDovetail_13154:HG4_Ill_manta_4253:HG4_Ill_svaba_23056:HG4_PB_SVrefine2PBcRDovetail_9572:HG4_PB_assemblyticsfalcon_15730;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0945946;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.196078;PBcalls=13;Illcalls=30;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=29;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=72;DistBack=45413;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=21:17937055-17937056;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3293.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:1/1:0:9:1:8:1/1:0:24:0:25:1/1:0:54:./.:.:.:.:.:.
chr21	18607191	HG2_10X_SVrefine210Xhap12_13271	C	CCCTGTCAAGCTACCACTGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAACTTCATATGGAACCAAAAAAGAGCCCCCATAGCCAAGACAATACTAAGAAAAAGAACAAAGCTGGAGGCGTCATGCTATCTGACTTCAAATTATACTACAAGGCTACAGTAACCAAAACAGCAATGGTACTGGTACCAAAACAGATATATAGATCAATGGAACACAACAGAGCCCTCAGAAATAATGCCACACATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAAGATTCCCTACTTAATAAATGTTGGAAAAACTGGCTAGCCCTATGCAGAAAACTGAAACTGGACCCCTTCCTTACACTTTATACAAAAATCAACTCAAGATGGATCAAAGACTTAAATGTAAGACCTAGGACCATAAATATCCTAGAAGAAAACCTGGGCAATACCATTCAGGACATAGGCGTGGGCGAGGACTTCATGACTAAAACACCAAAAGCAATGGCAACAAAGGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGATTCTACACAGCAAAAGAAACCACCATCAGAGTGAACAGGAAACCTACAGAATGGGAGAAAAATTTTGCAATCTATCCATCTGACAAAGGGCTAATAGAATCTACAATTAACTTAAGCAAATTTACAAGAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAACAGACACATGAAAAAATGCTCATCATCACTGGTCATCAGAGAAATGCAAATCAAAACCCCAGTGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGATGATGGAGAGGATGTGGAGAAATAGGAGCACTTTTACACTGTTGGTGGGAGTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTGGTGATTCCTCAAGGATCTAGAGCTAGAAATACCATTTGACACAGTGATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTACTATAAAGACACATTCATGTATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCATCAGTGATAGACTAGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGGATAAGTTCATGTCCTTTTCAGGGACATGAATGTAGCTGGAAACCATCACTCTCAGCACACTAACACAAGAACAGAAAACCAAACACTGCGTGTTCTCACAAGTGGGAGGTGAACAATGAGAACACATGGACATAGGGAGAGGAACATCACACACCAGGGCTTGTTGGGGAGTGGGGGACTAGGGGAGGGATAACATTAGCAGAAATACCTAATGTAGATGATGGGTTGATGGGTGCAGCAAACTACCATGGCACGTGTATACCTATGTAACAAAACTGCACATTCTTCACATGTACCCCTGAACTTAAAGTATAATAAAAATTAAAAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGAATCATGTGATGTGGCTATTTCTAAAGATGGACCAGGTTGAGCAGAAGTGGTATCACTGTTCACTTTAGACAGAGCTCTGAACACAGGAGGGGAAGAAAATTTTTAAAAGAAAAAGATCCAAAAATTTTTAAAAGAAGAATTGTAAATTGGCAAACTCTGTTAAAGAAAGAACCAAAAGAAGGTGAGTTTTTGGGAGCATTCTAAAGACAGTCCTCTAATTAAATAAGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAATAGTCCCCACCCCAGTTTAGAGATCACATTCAAATAAGCAAACTCTGTAAACACATCCTGAGTTCAGGTTTGTTTCCCCAGTACAAAAACAGAGCCAAGGAACAACAAATAAATACTTACTGAATGTCCTCTACGCTGGGTACCACAATTGATGCTGAAGGACAAGAATTACAAAGAACAAGTTAGAGTCCTTTCTAAGTCAAGTGATCCTGTTTGGTGGTCTCAGACTTTTCTTTTTTACAGCACACAGGTTACATGTAAAACAACTGTTCCATCAGTAATGAGTCTCTTTACAGTAAATGATTTCTGTGAGTCTTCCCTACTCCCCAAGGGTTCATATCAGAATCTTTGAGAAATCATAATATTTGGGGTATTTTGAAAAGTTTCCACTTTGAGATTCTAATATGTGTCCCTTCTCCAAGGATATACTACCCCTAGTTGAGAATTACGGGTTTGGTGAGGCTTGGTGATGCTTGGGGACTCAAAAACAGAGAAAGAAGTAGAGACTGATATAGCAACTTGTATACTAGATTTAATTACAAAATCATAGCACACAACAAAAACTTGTATACAACAAAGTCATGTATAAAAATCCCTTAAACTTCTGTGAAATACACTATAAATGGTTTCATATATAAAACTATATCCTATAACATCTGTATGTAAATGTGCTATGTATTCAAAGTTAAAGATCATCTATTCCCTTAGACAGTTTATATTCATAAATTATAGCACAAGATTTGACAACTTGAAAAGCTTTAGCAAATGTATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGGCAAAAAAAATTATCTCTTTCTATAACTCTTCTAGTCAATGTTCTGAATTGTTCTCAGTGCAATATTTACTCCTGAACTGCTTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGATCTAAAAAAAGAAAATCCTTAATATAGTTCACAATTGTCTTTCGGCATGCATACTGTTTCAGGCTTAAGTATATCCACAGCCTGAACACTTTTGCCCCACCTTTTAAATTATTCTTCTCATTGGCAAGTAGATGTAGTCGAATGTGTATAAGTTATATGCCTATCTGATGCTATTCCACTGTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCACGTAGAATATGCTTAGATGCACAGAGGACAAAGCCACTAGATCTTTGAAGAAGAAATTGAAAAAAGCATCACCATGGAGATAATATTTGGAACAGTGAAGAAACTAACAGTTAAAGATGTCAATGGAAGGCCGGGTGCAGTGGTTCACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13907:HG2_PB_PB10Xdip_18763:HG3_PB_pbsv_18720:HG2_PB_SVrefine2Falcon1plusDovetail_7252:HG3_Ill_SVrefine2DISCOVARDovetail_13347:HG2_Ill_SVrefine2DISCOVARplusDovetail_7762:HG2_10X_SVrefine210Xhap12_13271:HG2_PB_SVrefine2PBcRplusDovetail_6720:HG3_PB_SVrefine2PBcRDovetail_9335:HG3_PB_SVrefine2Falcon1Dovetail_11833:HG3_PB_HySA_28339;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13271:HG2_Ill_SVrefine2DISCOVARplusDovetail_7762:HG3_Ill_SVrefine2DISCOVARDovetail_13347;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0697426;ClusterMaxSizeDiff=0.0697426;ClusterMaxEditDist=0.12578;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=3216;DistBack=2341;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=424;REFWIDENED=21:18616962-18607196;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3294.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:54:0|1:33:0:0:37:0|1:24:0:0:10:0/1:19:10:0/1:103:249:1516:3071:.
chr21	18879965	HG2_PB_SVrefine2Falcon2Bionano_9400	T	TTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAATTTAAAAGGTTTTTAAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_18724:HG2_PB_SVrefine2PBcRplusDovetail_6723:HG2_PB_SVrefine2PB10Xhap12_13910:HG2_PB_SVrefine2Falcon2Bionano_9400:HG2_PB_SVrefine2Falcon1plusDovetail_7255:HG2_Ill_MetaSV_2973:HG2_PB_PB10Xdip_18767:HG2_10X_SVrefine210Xhap12_13273:HG4_PB_HySA_27329:HG2_PB_pbsv_19039:HG4_PB_pbsv_18970;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9400:HG2_PB_SVrefine2PB10Xhap12_13910:HG2_PB_SVrefine2PBcRplusDovetail_6723;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.188272;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=324;DistBack=-1;DistForward=26371;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=21:18879966-18879965;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9938;SizeDiff=1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3295.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:6:0:31:1/1:0:7:0:7:1/1:0:9:1/1:3:52:.:.:.
chr21	18992098	HG2_Ill_MetaSV_2974	T	TAAATTGCTTCAGTTTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_18768:HG2_PB_pbsv_19040:HG3_PB_pbsv_18725:HG4_PB_pbsv_18971:HG4_PB_SVrefine2Falcon1Dovetail_11861:HG4_PB_assemblyticsfalcon_15746:HG3_PB_SVrefine2Falcon1Dovetail_11836:HG2_PB_SVrefine2PB10Xhap12_13911:HG2_PB_SVrefine2Falcon2Bionano_9401:HG4_Ill_GATKHCSBGrefine_12777:HG3_Ill_GATKHCSBGrefine_12215:HG2_PB_SVrefine2PBcRplusDovetail_6724:HG2_Ill_MetaSV_2974:HG2_Ill_GATKHCSBGrefine_12373:HG2_PB_SVrefine2Falcon1plusDovetail_7256:HG2_10X_SVrefine210Xhap12_13274:HG2_Ill_manta_5013:HG3_PB_SVrefine2PBcRDovetail_9339:HG2_Ill_breakscan11_4934;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12373:HG2_Ill_MetaSV_2974:HG2_PB_SVrefine2PBcRplusDovetail_6724:HG3_Ill_GATKHCSBGrefine_12215:HG4_Ill_GATKHCSBGrefine_12777;NumExactMatchSVs=5;ClusterMaxShiftDist=0.17656;ClusterMaxSizeDiff=0.17656;ClusterMaxEditDist=0.210046;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=325;DistBack=37625;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=21:18992099-18992116;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:86:1/1:1:24:0:24:./.:0:2:1:4:1/1:0:8:1/1:2:40:.:.:.
chr21	19102502	HG2_PB_SVrefine2PBcRplusDovetail_6726	C	CGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCACCACTTTGGGAGGCCGAGGCAGGTGGATCCCGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGAGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGGGTAGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTGGCAGTGAGCCGAGACGGCGCCACTGCACTCCAGCCTGGAATTCCAACAAACTTAAATGTGGCAGTGAGAACCGCTTAGGAGATACATGTGGCCTTCTGAAATATGCTGAGTGGGGAACACTGAGCTGTATCACCGCTGTGCTATAGTTGATTCACTTATTTGGTCCTGTGGGTGCAATCTGCTGTTCTGAACACTAGCCCTTGTACCGTTGTCAATATCTTTGCTGGCCCAGTTCCCCGTTATGTATCGTGCTGGCTGAAATTTTATCTACCCTTTAAAGTTGATTCCAAATACTACCTGCTCCATAAAACCTTTCTTAAGTCCACCCCCTGCCAGCCTTGCATGTTGTTTTGAAGTTGGATAACATATTGCAGCAGGCAAAGTAGAAATAGCAATGGGCTGGGGACCACACCAAGCTCCAGTTCTGTGCAAACCAATAGCATCGGAGCATGTATACTCATAATCAGTTTTTGTTGAATGGCTGCATGACTGACTAAATGGATGAATCGGTTGCCTTGGACGAGAAACTTTTGGAGCCTTAATATCTTTATCTGTGGAATAAGGTCATTATAAAGAACTTCCTTTCCCTAAAAGTGGTCCTTGAAATACCTGGTTCTTGTTTAATGGTGAGTCTCATCCTTCTATCGGAACCAGAATCACTGGGGGCCTGAGAATCTGTGTTTAACATATACCGTTGGTGATCATTATACTCAATAAAATTGGAAAAGCATTGAACTGGTGGTTATCTGTTCAATCAAAGCAATGTGATGGCAGTTGCAAATGTATGACCTTGTTTATAAAGATGAGAAATTCCTTTTTTTTTTTTTTTTTTTGAGATGTTGTCTCACTGTTTTGCCCAGGCTGGAATGCAGTGGTGCAATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTTACCCTCCCGAGTAGCTGGGATTATAGGTGTGTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGAGGTTTCATCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCGCAAGTGATCCGCTCACCTTGGCCTCCCAAAGAGCTGGGATTCCAGGCGTGAGCCACCACACCCAACCAGAGAAATTCTTTTTGTTAAAGGAACGTGGAAGAAATCTCCTGGTTGAAAAAACATGTAAGTAGTGGGAAAAACCTGAAATACTCCAGGAATATTAGGATTGTCTCCAGGTAGAGTTAAGTTGGGGCAGAGTGAGAATGACACATATGAATATCATTAATTATTCACATATCCTTCCCCTTTACAGTCAATGATTATGCATTAATTACCTGGTCATCTGGCTAAGCCAAGCACTGAGGATAAAGGAATGATTTTTGCCATAACCTTTTTATGTAGATGTGGCCTTTATTATTATTCATCCTTGATGATGTCAGCCCCAGAACCAGGAACAGAAGCCCTCGGATGTAATTGAGTCCTATTTCCAAAATACTCCACTGTCCCACTGTCTTCTTACAGAGTCTGGAACTATGAATTGGAACTTCTTGCCTGCCTGCCTGCCTGCCTGCCTGCTTTCTTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTTCTTTCTTTCTTTTTTTCTGATGGGGTCTTGCTCTGTTGCCTAGGCTGGAGTGCAGTGGTGTGATCATAGCTCATTGTAGCCTTGACCTTCTGGGCTCAAGAGATCCTCCCAGCCCACCCTCCCAAGTAGCTAGAGCTATAGGTGCATGCCACCATACCAGCTAGCTACGTATTGTTTAATTGGGATCTATGGATTCTGTTTTCCATAGGAACAACTCTCTGAATTTTATAAATGAGATCGGTGGGGAAGAATGAGATTTTCTTTATAGGGTTTTTTTTTTTTAAGCTATCTTTGCTGTAATGTACCAAATCTAAGGGAGGATTACAAGTTATGTTACAGGTTTTTGGACTGAAAATCTTCTAAAGATAATAAGTCACCAGCCATGAAGACTTTATTCCTTCCCAAATCAGTATTCAACTTCAGACGAATTTTCTAGTCATCAAAGAAAGAGTGGACTTGCTGTGTTTCTGATTAATTTTCAGTGGCTTTCTTGTTAGAAAAACTAGCTTCTATTTCTGACTGTATCACTGAGCCACCGTGTGACCTTAAGTATGTTAAAACGCTTTGGGATATCTTGGTTTCACATTCTGTAAAGTGGAGATAAAACATATTGCATACATCTTTCAGAAACAACATGAGGATTAATGAGATAATGTTATTAGGCATATTAAAGTCACTCAACTTTTTTCATACTTAGATTTCTAAATCATTTCCTAATACTAAAATAGGGTCAGGTATTAAAATAGAAAGCAAACGACTATGGAGGATTAAGATTATAGTGAGCTGTCATAGTTATTTCCCAAAAAGAATGAACAGATGACAAATAGGATTATGAAGCTTCTATATATAAATCCTATATATAAATCTTTCATTTTACTTTAATTCTATGTTTCACTAATACTTTGGAAGAGAGAATCTTTTAGAGTTCAAGGAATCTTGATCCATATGCCAGGCTGTCTGCTTAATTTAAAAATTACCGAAAGGAACTAAAACCTTACATTGTCAATAATAATTTGCTTTACTGGGTAATGAGGGTGTTATCCCTAAGCAAGCATTCAGCCCAGAGCCCAGCCGCTGGTAGAGTGTTATCTCTGGGACAACTCAGTCCTTGCTGGAGGAAACCCATGAACCAAAATTCAGAGGGGCTATCCATCACTGCTGGCCCATCCATCATGCTGTTGCTCCACCTTGAACAGGGAATTTGCCTGCCATGAATTTCATCATTGGCTGTATTTCCTAAGTCGAGGCTGGTAATCAGACAGGGTCACCCTGCAATCCCTTCTGGTGAGTGAGGCATCACGCGGCTGCATTTCTCTTCTGGATTGATGGCATTTCCCAGCATCTGGAGGTTTTAAAGGTATGAAAAGCAGCTTAGAAAAGGCCAAGGGAGCAGCTCTGCTAGCACATACGTGGACACAAACAATAGGAATTGGAGATTGGGTGGGAGGAGAGGGGCTGGAGGGTGGAAAAAAGAGGGAAGAGGAAAAGCAGAAAATAAAAAGAAAAAATATAAGTCAGGTGGGAGGAAGGAGATCACAGAATTCTACATAAAAGTAGGGATAAAGGCCAGGCACGGTGGCTTGTGCCTGTAATCTCAGCACTCTGGGGCCAAGGGGGGGATCACGAGGTCAGGAGATCGAGATTATTCTGGCCAACGTGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCTGGTGGCAGTGGCACGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAAGCAGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGGGGATAAAAGGAAAACAGCACAGATGGTGTGATAAACCAGAAAGTTACAGAAAGTTACTTACGTTTATATTTACTGAGATGATAGGTTTGGGAGGTGGCAAGTCGACCTGTACCTATTTTCTCAAGAGTGTTTCATTTTCAAGCTGTTTACTTATATGCACCCCATTGGAGCCTTTCCATAAGATAGGCCAATATTATCCCTTTTTCATATGTTAAAATAAAAGA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9578:HG2_PB_PB10Xdip_18770:HG4_PB_SVrefine2Falcon1Dovetail_11863:HG3_PB_SVrefine2Falcon1Dovetail_11838:HG2_10X_SVrefine210Xhap12_13276:HG2_PB_SVrefine2PB10Xhap12_13913:HG3_PB_SVrefine2PBcRDovetail_9341:HG2_Ill_SVrefine2DISCOVARplusDovetail_7765:HG4_Ill_SVrefine2DISCOVARDovetail_13160:HG3_Ill_SVrefine2DISCOVARDovetail_13350:HG2_PB_SVrefine2PBcRplusDovetail_6726:HG2_PB_SVrefine2Falcon2Bionano_9403:HG2_PB_SVrefine2Falcon1plusDovetail_7258;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6726:HG3_Ill_SVrefine2DISCOVARDovetail_13350:HG4_Ill_SVrefine2DISCOVARDovetail_13160;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00201207;ClusterMaxSizeDiff=0.00201157;ClusterMaxEditDist=0.00905319;PBcalls=9;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=3979;DistBack=2326;DistForward=76;DistMin=76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=260;REFWIDENED=21:19102503-19102762;PctSeqSimilarity=0.9989;PctSizeSimilarity=0.9997;PctRecOverlap=0.9839;SizeDiff=-1;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=99;MatchId=3297.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:85:1/1:1:19:0:8:./.:0:1:0:3:1/1:0:38:1/1:2:380:.:4370:.
chr21	19275434	HG2_Ill_Cortex_5021	T	AAAATAAATAGAACAGTCATGGTTTTTTAGTTTTAAGAAATACATTGTGCAAGTTTTTTTTTTTTTTCCTCCACATAAACTTGAAGTAATGTTGCTATC	20	PASS	ClusterIDs=HG3_PB_pbsv_18729:HG4_Ill_GATKHCSBGrefine_12778:HG3_Ill_GATKHCSBGrefine_12216:HG2_Ill_GATKHC_29727:HG2_Ill_GATKHCSBGrefine_12374:HG2_PB_SVrefine2Falcon2Bionano_9404:HG4_PB_SVrefine2PBcRDovetail_9579:HG4_Ill_manta_4257:HG4_Ill_SVrefine2DISCOVARDovetail_13161:HG4_Ill_Cortex_2141:HG3_PB_SVrefine2PBcRDovetail_9342:HG3_Ill_manta_4082:HG3_Ill_Spiral_19059:HG3_Ill_SVrefine2DISCOVARDovetail_13352:HG3_Ill_Cortex_2180:HG2_Ill_manta_5014:HG2_Ill_SpiralSDKrefine_10100:HG2_Ill_Cortex_5021:HG2_10X_SVrefine210Xhap12_13278:HG3_PB_SVrefine2Falcon1Dovetail_11839:HG4_PB_assemblyticsfalcon_15748:HG4_PB_SVrefine2Falcon1Dovetail_11864:HG4_Ill_svaba_23072:HG4_Ill_Krunchall_25373:HG4_Ill_250bpfermikitraw_24333:HG4_Ill_150bpfermikitraw_23403:HG3_Ill_svaba_23374:HG3_Ill_Krunchall_24571:HG3_Ill_250bpfermikitraw_24015:HG3_Ill_150bpfermikitraw_23290:HG2_Ill_svaba_23141:HG2_Ill_250bpfermikitraw_24699:HG2_Ill_150bpfermikitraw_23247:HG4_PB_pbsv_18974:HG2_PB_pbsv_19044;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13278:HG2_Ill_Cortex_5021:HG2_Ill_SpiralSDKrefine_10100:HG2_Ill_manta_5014:HG3_Ill_Cortex_2180:HG3_Ill_SVrefine2DISCOVARDovetail_13352:HG3_Ill_Spiral_19059:HG3_Ill_manta_4082:HG3_PB_SVrefine2PBcRDovetail_9342:HG4_Ill_Cortex_2141:HG4_Ill_SVrefine2DISCOVARDovetail_13161:HG4_Ill_manta_4257:HG4_PB_SVrefine2PBcRDovetail_9579;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0918367;ClusterMaxSizeDiff=0.071066;ClusterMaxEditDist=0.17734;PBcalls=9;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=98;DistBack=0;DistForward=51165;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=21:19275435-19275433;PctSeqSimilarity=0.9951;PctSizeSimilarity=0.9898;PctRecOverlap=0.9596;SizeDiff=1;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=98;MatchId=3298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:24:0|1:19:4:0:18:1|0:1:46:25:1:0/1:36:19:./.:.:.:.:.:.
chr21	19517296	HG2_PB_SVrefine2PBcRplusDovetail_6729	A	ATGACTAATTTCAATTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGTATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAGTGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTC	20	PASS	ClusterIDs=HG4_PB_HySA_27332:HG3_PB_pbsv_18731:HG2_PB_PB10Xdip_18772:HG4_PB_assemblyticsfalcon_15750:HG2_Ill_breakscan11_4935:HG3_PB_SVrefine2PBcRDovetail_9344:HG2_PB_SVrefine2Falcon1plusDovetail_7260:HG3_PB_SVrefine2Falcon1Dovetail_11841:HG4_PB_SVrefine2PBcRDovetail_9581:HG2_PB_SVrefine2PBcRplusDovetail_6729:HG2_PB_SVrefine2Falcon2Bionano_9406:HG2_PB_SVrefine2PB10Xhap12_13915:HG4_PB_SVrefine2Falcon1Dovetail_11866:HG2_PB_HySA_34332:HG4_PB_HySA_27333:HG2_PB_HySA_34331;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6729;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0416606;ClusterMaxSizeDiff=0.0416606;ClusterMaxEditDist=0.140107;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=3403;DistBack=13827;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=21:19517297-19517313;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9997;PctRecOverlap=0.9994;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:58:1|0:3:36:36:5:1|0:0:6:31:0:0/1:27:8:0/1:128:477:.:3304:.
chr21	19959444	HG4_PB_assemblyticsfalcon_15755	C	CGTTACCTGCATCAGTGACTGATCAGAATGGGGTAAGGCACGCCATTCCCT	10	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_15755:HG2_PB_HySA_34333:HG2_PB_PB10Xdip_18775:HG2_PB_pbsv_19050;NumClusterSVs=4;ExactMatchIDs=HG4_PB_assemblyticsfalcon_15755;NumExactMatchSVs=1;ClusterMaxShiftDist=0.114286;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.207547;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=50;DistBack=2;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=456;REFWIDENED=21:19959431-19959886;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:50:0|1:25:4:4:44:0/0:6:1:7:0:0/1:14:4:./.:.:.:.:.:.
chr21	20396334	HG4_Ill_manta_4258	C	CTCACACTTGAAGTGTGAAGTTATAAGCAAGCAAGGGAGGATGCGTTCCCAGTAATGACTTCAACTCTAATCCATCACCACGTAGATCATTCGAGCATCCTCCCTTGCTTGCTTATAACT	20	PASS	ClusterIDs=HG3_PB_HySA_28351:HG4_PB_assemblyticsfalcon_15758:HG3_PB_assemblyticsfalcon_15990:HG2_PB_pbsv_19053:HG2_PB_HySA_34336:HG3_PB_pbsv_18739:HG4_PB_pbsv_18983:HG2_PB_PB10Xdip_18776:HG4_PB_SVrefine2PBcRDovetail_9585:HG4_PB_SVrefine2Falcon1Dovetail_11870:HG4_Ill_manta_4258:HG4_Ill_SVrefine2DISCOVARDovetail_13169:HG4_Ill_MetaSV_3082:HG4_Ill_GATKHCSBGrefine_12787:HG3_PB_SVrefine2Falcon1Dovetail_11844:HG3_Ill_MetaSV_3130:HG2_PB_SVrefine2PBcRplusDovetail_6733:HG2_PB_SVrefine2PB10Xhap12_13919:HG2_PB_SVrefine2Falcon2Bionano_9411:HG2_PB_SVrefine2Falcon1plusDovetail_7264:HG2_Ill_manta_5016:HG2_Ill_MetaSV_2975:HG2_Ill_GATKHCSBGrefine_12378:HG2_10X_SVrefine210Xhap12_13284:HG3_PB_SVrefine2PBcRDovetail_9348:HG3_Ill_Spiral_19070:HG3_Ill_SVrefine2DISCOVARDovetail_13355:HG3_Ill_GATKHCSBGrefine_12223:HG4_PB_HySA_27338;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13284:HG2_Ill_GATKHCSBGrefine_12378:HG2_Ill_MetaSV_2975:HG2_Ill_manta_5016:HG2_PB_SVrefine2Falcon1plusDovetail_7264:HG2_PB_SVrefine2Falcon2Bionano_9411:HG2_PB_SVrefine2PB10Xhap12_13919:HG2_PB_SVrefine2PBcRplusDovetail_6733:HG3_Ill_MetaSV_3130:HG3_PB_SVrefine2Falcon1Dovetail_11844:HG4_Ill_GATKHCSBGrefine_12787:HG4_Ill_MetaSV_3082:HG4_Ill_SVrefine2DISCOVARDovetail_13169:HG4_Ill_manta_4258:HG4_PB_SVrefine2Falcon1Dovetail_11870:HG4_PB_SVrefine2PBcRDovetail_9585;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.240964;PBcalls=17;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=119;DistBack=2476;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=21:20396335-20396351;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3301.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:2:56:1/1:1:30:1:20:1/1:2:47:3:53:0/1:14:28:./.:.:.:.:.:.
chr21	21324524	HG2_PB_SVrefine2Falcon1plusDovetail_7268	A	ACCACATCCGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	10	PASS	ClusterIDs=HG4_PB_pbsv_18987:HG4_PB_HySA_27346:HG2_PB_pbsv_19056:HG3_PB_assemblyticsfalcon_15994:HG3_PB_SVrefine2Falcon1Dovetail_11846:HG4_PB_SVrefine2Falcon1Dovetail_11874:HG2_PB_SVrefine2Falcon1plusDovetail_7268:HG4_PB_SVrefine2PBcRDovetail_9587;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7268;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0664653;ClusterMaxEditDist=0.222874;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=327;DistBack=-2;DistForward=-1;DistMin=-2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=21:21324525-21324540;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3302.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:./.:14:16:8:4:./.:20:0:0:3:0/1:23:6:0/1:8:18:.:.:.
chr21	21514991	HG2_PB_SVrefine2Falcon1plusDovetail_7269	T	TTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCACCACCAGGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGGTCTCGATCTCCTGACCTCGTGATCCGCTCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCGCGCCCGGCCCATTTATTTATTATTATTTTGTGTGTGTGTGTGGGTGTGTGTGTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11847:HG3_PB_HySA_28356:HG2_PB_pbsv_19057:HG4_PB_pbsv_18989:HG4_PB_HySA_27350:HG3_PB_pbsv_18744:HG2_PB_PB10Xdip_18781:HG2_PB_HySA_34347:HG4_Ill_GATKHCSBGrefine_12792:HG3_Ill_GATKHCSBGrefine_12227:HG2_Ill_GATKHCSBGrefine_12383:HG4_PB_SVrefine2PBcRDovetail_9588:HG4_Ill_SVrefine2DISCOVARDovetail_13173:HG3_PB_SVrefine2PBcRDovetail_9351:HG3_Ill_SVrefine2DISCOVARDovetail_13359:HG2_PB_SVrefine2PBcRplusDovetail_6736:HG2_PB_SVrefine2PB10Xhap12_13922:HG2_PB_SVrefine2Falcon2Bionano_9414:HG2_PB_SVrefine2Falcon1plusDovetail_7269:HG2_Ill_SVrefine2DISCOVARplusDovetail_7777:HG4_PB_SVrefine2Falcon1Dovetail_11875;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7777:HG2_PB_SVrefine2Falcon1plusDovetail_7269:HG2_PB_SVrefine2Falcon2Bionano_9414:HG2_PB_SVrefine2PB10Xhap12_13922:HG2_PB_SVrefine2PBcRplusDovetail_6736:HG3_Ill_SVrefine2DISCOVARDovetail_13359:HG3_PB_SVrefine2PBcRDovetail_9351:HG4_Ill_SVrefine2DISCOVARDovetail_13173:HG4_PB_SVrefine2PBcRDovetail_9588;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0650155;ClusterMaxSizeDiff=0.0619195;ClusterMaxEditDist=0.262195;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=315;DistBack=54011;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=184;REFWIDENED=21:21514992-21515175;PctSeqSimilarity=0.9752;PctSizeSimilarity=1;PctRecOverlap=0.5937;SizeDiff=0;StartDistance=-128;EndDistance=-128;GTMatch=0;TruScore=85;MatchId=3303.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:33:0:18:./.:0:0:0:0:1/1:0:13:1/1:2:56:.:.:.
chr21	21840812	HG2_Ill_manta_5019	A	AATATATAATAATATATAATATATATTATATAATTATATATAATTATATAATATATAATAAAATT	20	PASS	ClusterIDs=HG3_Ill_Spiral_19074:HG3_PB_pbsv_18747:HG4_PB_pbsv_18993:HG2_PB_PB10Xdip_18784:HG4_Ill_manta_4259:HG4_Ill_Krunchall_25392:HG4_Ill_GATKHC_29719:HG4_Ill_GATKHCSBGrefine_12794:HG4_Ill_250bpfermikitraw_24357:HG4_Ill_150bpfermikitraw_23429:HG3_Ill_scalpel_17836:HG3_Ill_manta_4087:HG3_Ill_GATKHC_29658:HG3_Ill_GATKHCSBGrefine_12229:HG3_Ill_250bpfermikitraw_24029:HG3_Ill_150bpfermikitraw_23307:HG2_Ill_scalpel_17477:HG2_Ill_manta_5019:HG2_Ill_SpiralSDKrefine_10111:HG2_Ill_Krunchall_25051:HG2_Ill_GATKHC_29749:HG2_Ill_GATKHCSBGrefine_12385:HG2_Ill_FB_15840:HG2_Ill_250bpfermikitraw_24718:HG2_PB_HySA_34354:HG3_PB_HySA_28361:HG2_PB_pbsv_19062;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24718:HG2_Ill_FB_15840:HG2_Ill_GATKHCSBGrefine_12385:HG2_Ill_GATKHC_29749:HG2_Ill_Krunchall_25051:HG2_Ill_SpiralSDKrefine_10111:HG2_Ill_manta_5019:HG2_Ill_scalpel_17477:HG3_Ill_150bpfermikitraw_23307:HG3_Ill_250bpfermikitraw_24029:HG3_Ill_GATKHCSBGrefine_12229:HG3_Ill_GATKHC_29658:HG3_Ill_manta_4087:HG3_Ill_scalpel_17836:HG4_Ill_150bpfermikitraw_23429:HG4_Ill_250bpfermikitraw_24357:HG4_Ill_GATKHCSBGrefine_12794:HG4_Ill_GATKHC_29719:HG4_Ill_Krunchall_25392:HG4_Ill_manta_4259;NumExactMatchSVs=20;ClusterMaxShiftDist=0.176;ClusterMaxSizeDiff=0.176;ClusterMaxEditDist=0.242424;PBcalls=6;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=7868;DistForward=49;DistMin=49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=125;REFWIDENED=21:21840797-21840921;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:82:1/1:2:23:2:47:1/1:0:8:0:8:1/1:0:51:./.:.:.:.:.:.
chr21	22470275	HG2_PB_SVrefine2Falcon2Bionano_9420	T	TAAATGTTCCTATTTAATAGCTCTCTTGAGAGGAACTATGCTTAATACCTTAAAGCCCATATTCTAAGGTAATACATCCCAATGATAGCCATTAGCCATATCTATATGATATGACCTGATAGCATGAACTATCAAGCACTTGAAATTTGGCTAGTTGCAATTGATATGTAACTGCTGGATTTCGAAGAGTACTACGAAAAAGCAAAAAGCTAATGTAAAAGCTTCAATAATTTTTTCTTGAGCATATGCTGGAATTATATTACTCAGATATATTGGTCTAAATACATATATTATTAAAATTAATTTCATATATATATTTTTACTTTTAAAAATATGGCTACAGAAAACTTAAAATTGCATATGTGGCTCACATTGTGTTATCAGGCAGCATTGCTTTACGGCCCATAATGCCTTTGTTCAAATCCTAACTTCACAATTTATTTACTCTACAATGGACCTGGTACTTAACCTCTCTGTTTCTATAAAGCAATAATTTATAGTAATAATAATGTATTATCAATAATATAGAAATTAATTTAAATCAGTTAATAATAACTATTAAGCACGTACATACATTGACAGTTGAGCACTGTCAGTTATTATTGAGTATTGATTAGTACAGGAAATGTGCTAAACATATTCTTTCTGTGAAACTTTTTTTGCATATTTTGTTCTCTAATAACTAGCTTCATTTGCTCTTTCTAGACATATTGCTATATGATTGGGTCAGATTACGCCTTCTTTACATCAGCCAAATCAAAGCTTGTTTTCATAAGAATACACACAGGACTGTTTGAAAGTGTTGAAACACAGCCCACTTTCATCACCAACATGTCTAGACTTCAACATGAACGAGTTTATGCACAATATTTTTTGTTTACTTCTATACATGACTAATCTTATCCATTGTGTATGTGTATAAGTGTGTAAGTGCATACAAGCATATGTTTTAATTGTTTCTTTCATTATTAGAGGATGGCCTTTTTGTGACTAAAGAAAGGAAACTTTTTCTTAGCCAACTAAGAAGTGATTAAACTATCTTATTATCTAGTATCAAAAATAATGTAGAATTTACATTAAATATAATATTAAATTACAATATGTAAATATTAAATGTAATTTTATATATAAGAATTTAGGTTTAATACAAGTATGTGATTCTAAACTTTCTATTGCATTGCCAATCACAGGTGTTCTATAAATCATTACAGGTTTATCAACTGAAAGTTCTAAATTTTAGATCTATTTTAAAAATAAATTTTAGTATAGGAAATAGTTTCTAAATATGGTTGTATTAACTAGACTTCTGTTAATAGACTACATTCATTTATGCTTTATGTTAGTACCTCTCTGTTAAATATCTTGAGAAATCAATTCTTTTAGACATTGTAATATTATTTTGCATTTCTTTGGCATAAGTGATGAGCTGTGTATCAATATTTCCTTTTGGGGCTTTATTTAATGTGCATTCATCATCCTACAACTAGAAAATAATTATCATTCAAAATACCAGTTTCTCTGTAGACTATAATGTTTCTATATAGTTATTATTCTCCAAGTCAGGGTTTATAATATAGTCTGAACAATATATTGTTTCATATGTAGCCATACTAATTTTTCTGTATTGTCATTGAGAACACAGATTGTCCCAGCTTTTATCTCATTATATATTTTTTCTGTTTGAAATATTTTCATCCTGATGTTATTGCTGTCTCTTCTACAAATACTCTGCTCTCCTAATTCATTTTAGTTCCATCGCATGGTATTTAATTTACCTATTAATACTGTGTCATGGGTCCTCATCCAAAGCTTTTCTAAAGTCTAACTAGACTTTATGAATTGAATTTGAATTATTTTGGCAGTAATAACTTCAAAGCATTGTAATAGGTTTGTTAAGCATGACCTCCCCTGCCTGAATTCATGCTGGCTATAATTAATCAAGTTATGCTTTACCAGGTGCGCATTTGCCATGCTCCTAAATATGTTTCCATGAGTGAAATTCTACAGTGGATGTTAACGTTTGTCACTCCTGATTCATCTTCTGCTGTTCATTTTATAACACATTCTGTGGTTTAAGTATTCATTTAATGAGCTAATAATATTTCACTTAGTAATAGGAGAATATATTATTTATTCCAGTTGAAGTTACTACTTATTGTAACTGAAATTCCCCAAAAGATTTGATCTTAACTATATCCTTAAACTCTAAATTATTATAATGAAAAAATAGGACAATAATTATTGCAAAGTATAGTGTTTTTCCAGCATTCAAAAGCCCATTTCGTTTTTTTCAAATTTCTTTTTATTTTTCATCATTTAACAGAAATGAAGGACATTTAAAGCACATTAAAAGACAAAGGAAATGGCAGCTTCTGTAGTAACATTTATCTAAATGATGAAGTATCATAATCAATCACAGAAAGATCATACTTTGTCCTTAGATTCTGCATTGGAGTCTACAGATAATGGAGAATTATTACAGTTGTAGCAAATCTTAAGATGTACTTAATTTTACAAGTTAAGAAAATAAAATTTAAGTTATTTATAATCTGCTAGAAAAAAGGCACTATGACATATGAAATTGATATTTTGTATTGTTATATATGATTATTATTTAGCTTTGTGACAGAAACTACTAAGAGCACAGAAAATAATATCCCATTTTGTTGTGAAATTTAAATCAAATTCAAAATATTTTTTCTGTTGAAAACTGTATTATTTTCCAGGTGCAAATGATGGAATAAAAAATGTGTAGCCTTAGAAATAAAAAAAAGTACAAATATATTTCTGAGGCTAAGTTTATTCAAATTGGAATTCTTACTAGTAATTTATTTCATTTTCATAAAGATTAATTAACTCGATTTTGTATAATTAATGAATAATGATATTTACAACATGAATTTTTTTCCCCATGACAATGCTGAAATCTTCAGTGTTCTTTGATTTCTTAGCTATTTTCAGGAGGGAATGAGTATTTTATTAATTGAATGCATGATTAGGCATTACTCAGTAGATATTTTAATAGATAAAATATTTTGTCTATTTGCCTCACACAAACATGCATTACACAGACATTCAGATAATAATAGTTACGTTGTAATTTATACTAATATATACTCATGTTTTTACATTTCTCAGAATTGTGACACTTTTAAATCTAAATTTGTTA	20	PASS	ClusterIDs=HG4_PB_HySA_27362:HG3_PB_pbsv_18753:HG3_PB_HySA_28375:HG2_PB_pbsv_19067:HG4_PB_SVrefine2Falcon1Dovetail_11879:HG4_PB_SVrefine2PBcRDovetail_9593:HG4_Ill_SVrefine2DISCOVARDovetail_13178:HG3_PB_SVrefine2PBcRDovetail_9356:HG2_PB_SVrefine2PBcRplusDovetail_6739:HG2_PB_SVrefine2PB10Xhap12_13926:HG2_PB_SVrefine2Falcon2Bionano_9420:HG2_Ill_SVrefine2DISCOVARplusDovetail_7782:HG2_10X_SVrefine210Xhap12_13291:HG3_PB_SVrefine2Falcon1Dovetail_11851:HG3_Ill_SVrefine2DISCOVARDovetail_13363:HG2_PB_SVrefine2Falcon1plusDovetail_7273:HG4_PB_HySA_27363:HG2_PB_PB10Xdip_18790:HG2_Ill_breakscan11_4938;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13291:HG2_Ill_SVrefine2DISCOVARplusDovetail_7782:HG2_PB_SVrefine2Falcon2Bionano_9420:HG2_PB_SVrefine2PB10Xhap12_13926:HG2_PB_SVrefine2PBcRplusDovetail_6739:HG3_PB_SVrefine2PBcRDovetail_9356:HG4_Ill_SVrefine2DISCOVARDovetail_13178:HG4_PB_SVrefine2PBcRDovetail_9593;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0630259;ClusterMaxSizeDiff=0.0627199;ClusterMaxEditDist=0.180027;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=3168;DistBack=14535;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=21:22470276-22470280;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3306.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:145:1/1:0:11:0:13:1/1:0:13:0:6:1/1:0:47:1/1:6:248:.:3109:.
chr21	22703898	HG2_Ill_SVrefine2DISCOVARplusDovetail_7785	T	TATACTCTATATACATATATATATACTCTATATATATATATACTCTATATATATATATATACTCTATATATATATATATATACTCTCTCTCTCTCCATATATATATATATATACTCTCTCTCTCTCTCTATATATATATATATAGAGAG	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3133:HG3_Ill_SVrefine2DISCOVARDovetail_13368:HG3_PB_SVrefine2PBcRDovetail_9359:HG4_PB_SVrefine2PBcRDovetail_9595:HG3_PB_assemblyticsfalcon_16008:HG2_PB_SVrefine2PB10Xhap12_13929:HG4_PB_SVrefine2Falcon1Dovetail_11881:HG2_PB_SVrefine2PBcRplusDovetail_6742:HG2_Ill_SVrefine2DISCOVARplusDovetail_7785:HG2_Ill_MetaSV_2977:HG2_10X_SVrefine210Xhap12_13294:HG2_PB_SVrefine2Falcon1plusDovetail_7276:HG2_PB_SVrefine2Falcon2Bionano_9423:HG2_PB_HySA_34371:HG3_Ill_Spiral_19085:HG3_PB_SVrefine2Falcon1Dovetail_11854;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13294:HG2_Ill_MetaSV_2977:HG2_Ill_SVrefine2DISCOVARplusDovetail_7785:HG2_PB_SVrefine2PBcRplusDovetail_6742:HG4_PB_SVrefine2Falcon1Dovetail_11881;NumExactMatchSVs=5;ClusterMaxShiftDist=0.325581;ClusterMaxSizeDiff=0.325581;ClusterMaxEditDist=0.396887;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=148;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=21:22703899-22703899;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.9865;PctRecOverlap=0.9866;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3307.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:5:46:0:8:1/1:0:6:0:6:./.:1:15:./.:.:.:.:.:.
chr21	22783425	HG2_Ill_scalpel_17488	T	TATATATGTGTATATATATATACATATATATGTGTATATATATATACACATATATATGTGTATATATACATATATATACATATATGTGTGTATATATATATACATATATATGTATATATATACACAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7277:HG3_Ill_MetaSV_3134:HG3_PB_HySA_28379:HG4_Ill_scalpel_17087:HG2_10X_SVrefine210Xhap12_13295:HG3_Ill_GATKHC_29680:HG3_Ill_GATKHCSBGrefine_12244:HG4_Ill_SVrefine2DISCOVARDovetail_13181:HG2_Ill_scalpel_17488:HG2_Ill_SVrefine2DISCOVARplusDovetail_7786:HG2_Ill_GATKHC_29765:HG2_Ill_GATKHCSBGrefine_12402:HG2_PB_SVrefine2PB10Xhap12_13930:HG4_PB_SVrefine2Falcon1Dovetail_11882:HG2_PB_PB10Xdip_18796:HG3_PB_pbsv_18757:HG2_PB_pbsv_19071:HG2_PB_SVrefine2Falcon2Bionano_9424:HG4_PB_SVrefine2PBcRDovetail_9596:HG3_Ill_SVrefine2DISCOVARDovetail_13369:HG2_PB_SVrefine2PBcRplusDovetail_6743:HG3_PB_SVrefine2PBcRDovetail_9360:HG4_PB_pbsv_19003:HG4_PB_assemblyticsfalcon_15780;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12402:HG2_Ill_GATKHC_29765:HG2_Ill_SVrefine2DISCOVARplusDovetail_7786:HG2_Ill_scalpel_17488:HG4_Ill_SVrefine2DISCOVARDovetail_13181:HG4_Ill_scalpel_17087;NumExactMatchSVs=6;ClusterMaxShiftDist=0.278912;ClusterMaxSizeDiff=0.272109;ClusterMaxEditDist=0.38;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=126;DistBack=-1;DistForward=4;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=275;REFWIDENED=21:22783336-22783610;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3308.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:1:33:0:8:1/1:0:8:0:8:1/1:2:26:./.:.:.:.:.:.
chr21	23080617	HG4_Ill_MetaSV_3083	A	AGACGAGAAAATGAGGTGATTTTCATATTGAATTGCAAATTCGAAGAAGCAGCTTCAAACCTGCCGGGGCTTCTCCCGCCTTTTTTCCCGGCGGCGGGAGAAGTAGATTGAAGCCAGTT	20	PASS	ClusterIDs=HG3_PB_HySA_28385:HG4_PB_pbsv_19005:HG3_PB_assemblyticsfalcon_16012:HG4_PB_HySA_27365:HG3_PB_pbsv_18758:HG2_PB_HySA_34377:HG3_PB_SVrefine2PBcRDovetail_9361:HG4_PB_SVrefine2PBcRDovetail_9597:HG4_PB_SVrefine2Falcon1Dovetail_11884:HG4_Ill_manta_4265:HG4_Ill_SVrefine2DISCOVARDovetail_13183:HG4_Ill_MetaSV_3083:HG4_Ill_GATKHCSBGrefine_12811:HG2_10X_SVrefine210Xhap12_13296:HG2_PB_SVrefine2Falcon1plusDovetail_7278:HG2_PB_SVrefine2Falcon2Bionano_9425:HG3_PB_SVrefine2Falcon1Dovetail_11856:HG3_Ill_GATKHCSBGrefine_12245:HG2_PB_SVrefine2PBcRplusDovetail_6744:HG2_PB_SVrefine2PB10Xhap12_13931:HG2_Ill_manta_5026:HG2_Ill_MetaSV_2978:HG2_Ill_GATKHCSBGrefine_12403:HG2_PB_PB10Xdip_18797:HG2_PB_pbsv_19072;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13296:HG4_Ill_GATKHCSBGrefine_12811:HG4_Ill_MetaSV_3083:HG4_Ill_SVrefine2DISCOVARDovetail_13183:HG4_Ill_manta_4265:HG4_PB_SVrefine2Falcon1Dovetail_11884:HG4_PB_SVrefine2PBcRDovetail_9597;NumExactMatchSVs=7;ClusterMaxShiftDist=0.127119;ClusterMaxSizeDiff=0.118644;ClusterMaxEditDist=0.253061;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=118;DistBack=11114;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=21:23080618-23080618;PctSeqSimilarity=0.9958;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3309.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:./.:0:3:0:3:1/1:0:22:0:10:1/1:0:16:./.:.:.:.:.:.
chr21	23260155	HG2_PB_SVrefine2PBcRplusDovetail_6745	A	AAGATCTTTTTATGTTCTTAAGATAAAGAAATATAAGGACTCAAACTTGATTTTAATATATCATTTTAATAGAATTTTCTACCCTAAAGAATTAGAGATCTTCATACCACTCTTAGAGCGATGATTCAGAATGTTATTCTATGAAAATCAACTTTTATACCACATTCTTTAATTGTGTGATTATCAATTTTTATTGTAATGCATGGGCTTAAAATTCATTTTCAAAACCTTATGAACCAAAAGAACGTGCATTCTTTCCTTGTTTTGACAAAATATTTATAAATAGAATGTAAGCATCTTAAAACATCATAGTTTCTAATTCCATGCAGTATGTAGAAATGAGCCATCAGGGATTTGACCCAGTGATGTATAAACAAAGAAGGGGTAAATTTAAATGTAAAATTCTGAAATTAAAAGCAAGCCAAGGGCCTTTTTGGTTTAACATATCTGTATTTCCTCAAGATTACATTTGTCAACTTTCTGGTAAAACCTGAAGAAAAGCAGGTGAAATTTTCAGCTTGTCTGTTCTTGGTTAATTGGGGACCAGGAACTAAACAGATGACTAAGTGTCTCTCTTCTTGGGTATTTGGGAAATAAGGAAATTGAACTGACAAATGCTTCAACTTATATCTGAAGATATCAATAGGACATACACATGAATTCCATTGTATTCATCACTGTGTTACTTTGTGTTTTGCCTTTATACAGGTAATATTTTAATACAATACTAACCGAGAAAATTAGCATTTCATGAACACTATCTTTATGACAGATATTATTTCAAGTACTCTAAATATATTGATTGATTTAAATATAGTATTATTTTTCCTGTTTTGAAGAAAGGAAACCTGTAACACAGAAGGCTCAAATAAAATGTCTAAATTTGAACAGATAATATGTGGGAGAATTGAGATTCAAACCCAGCACAATGGTGATGCTGGAACACACACACATACACACACACACACACACATATACACACAGTAAGAATTTTATACACACATATATAATTTAACTGTGTATGTTTTGCATATGTATCCCAACGCATGTTTTTTGTTTACTTATTGAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATTTCTTTGCTGTGGTAGACTGTCACATAAGATCGGTTTCTTCAGAGAAAGAGAACCAGTAAATATATGTGTGTGTGTGTGTGTTCATGTGTGTATAAAATTTTTCTCTATTTAGGAATTGGCTTATAGGGTTGTAAGACAGGCAGGTCCAAAATTTGTAGAGTAGATCAGCCGGCTGGAAACTCAAGTCTGCTGCTGCAGACTTGAGAATTTCTTCTTCCTCAGAGAAACCACAGTTTTGTTCTTCAGGCCTTACAAATGATCTAATGAGATTCACCCAGATTATCAAAAATAATTTCTTTTAGTTAAAGTCAACCATTATAAATGTTTACGAAATCTACAAAACACCTTTACAGTAACAACCAAATTAGTGTTTGATTGATTATCTGGGTACTATAGGCTAGACAAACTAACACATAAAATTAACAAACATAATTGGCAATAATACTAATAAAGGTGAATGCGAAGAGTTGGAAACTGC	20	PASS	ClusterIDs=HG4_PB_HySA_27366:HG4_PB_pbsv_19007:HG3_PB_pbsv_18761:HG2_PB_pbsv_19073:HG2_PB_PB10Xdip_18798:HG2_Ill_breakscan11_4940:HG4_PB_SVrefine2PBcRDovetail_9598:HG2_10X_SVrefine210Xhap12_13298:HG3_PB_SVrefine2Falcon1Dovetail_11858:HG2_PB_SVrefine2PBcRplusDovetail_6745:HG2_PB_SVrefine2PB10Xhap12_13932:HG2_PB_SVrefine2Falcon2Bionano_9426:HG2_PB_SVrefine2Falcon1plusDovetail_7279:HG2_Ill_SVrefine2DISCOVARplusDovetail_7788:HG3_PB_SVrefine2PBcRDovetail_9363:HG4_PB_SVrefine2Falcon1Dovetail_11886:HG4_Ill_SVrefine2DISCOVARDovetail_13185:HG3_Ill_SVrefine2DISCOVARDovetail_13373;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7788:HG2_PB_SVrefine2Falcon1plusDovetail_7279:HG2_PB_SVrefine2Falcon2Bionano_9426:HG2_PB_SVrefine2PB10Xhap12_13932:HG2_PB_SVrefine2PBcRplusDovetail_6745:HG3_PB_SVrefine2Falcon1Dovetail_11858;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0493218;ClusterMaxSizeDiff=0.0480888;ClusterMaxEditDist=0.196682;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=1583;DistBack=2808;DistForward=22208;DistMin=2808;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=6;REFWIDENED=21:23260156-23260161;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3310.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:114:./.:1:5:0:0:1/1:0:8:0:9:1/1:0:33:1/1:15:268:.:1557:.
chr21	23579557	HG2_Ill_breakscan11_4941	T	TAAGTATAATTTTCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7280:HG4_PB_pbsv_19008:HG2_PB_pbsv_19074:HG3_PB_assemblyticsfalcon_16015:HG2_PB_PB10Xdip_18799:HG3_PB_SVrefine2Falcon1Dovetail_11859:HG2_Ill_breakscan11_4941:HG4_PB_SVrefine2Falcon1Dovetail_11887:HG4_PB_SVrefine2PBcRDovetail_9599:HG2_PB_SVrefine2PBcRplusDovetail_6746:HG2_PB_SVrefine2PB10Xhap12_13933;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_breakscan11_4941;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0943089;ClusterMaxSizeDiff=0.0943089;ClusterMaxEditDist=0.209857;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=306;DistBack=-13;DistForward=0;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=21:23579558-23579570;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9935;PctRecOverlap=0.9935;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3311.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:57:1|0:0:41:31:1:./.:49:0:1:4:0/1:23:11:./.:2:23:.:.:.
chr21	23626190	HG3_PB_assemblyticsfalcon_16017	AACCTATTTTCTTTT	TCTTTTTTTTTTTCTTTTTTTTTTTTTTATAAAGGAAAGATGTTTAATTGACTCACTGTTCTGCATGGCTGGGAAGGCCTCAGGAACTTACAATTATGGCGGAAGGTGAAGGAGAACCAAGTACCTTCTTTACAAGGTGGCAGGAGAGAGAGTGTGTGTGTGCACAGGGAAACTGCTACTTTAAAAACATCAGATCTCATGAGAACTCATTCACCATAACAAGAACAGCACAGGGGAAATGGCTCCCACGATACAATCACCTCCCACCAGGTTCCTCTCTCAACAGTTGGGATTACAATTCTAGACGAGATTTGGGTGGCGACACAGGGCCAAACCATAGCACATCTCTGATTTCTGTTTTAATCTACTGGTCTGGTCTACCTTGATTTCCACTAGGGAAAAGGGGAATGTGTCCCCTAGATCTATGTCTTTTTTTTTTTTTTTTTTGAACGAAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCCGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATAGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTACTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGACTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCATTCTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTCTTTAATCCATCTTGAATTAATTTTTGTATAAGGTGTAAGGAAGGGATTCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTTCCCAGCACCATTTATTAAACAGGGAATCCTTTCCCCATTTCTTGTTTTTGTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTTGGTTGTGTCTCTGCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTTGATCTTTGTTGGTTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11860:HG3_PB_pbsv_18764:HG4_PB_pbsv_19009:HG3_PB_HySA_28388:HG3_PB_assemblyticsfalcon_16017:HG4_PB_SVrefine2PBcRDovetail_9600:HG4_PB_SVrefine2Falcon1Dovetail_11888:HG2_PB_SVrefine2Falcon1plusDovetail_7281:HG3_PB_SVrefine2PBcRDovetail_9364;NumClusterSVs=9;ExactMatchIDs=HG3_PB_assemblyticsfalcon_16017;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0291884;ClusterMaxSizeDiff=0.0288905;ClusterMaxEditDist=0.177232;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=6621;DistBack=-15;DistForward=0;DistMin=-15;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=21:23626205-23626189;PctSeqSimilarity=0.996;PctSizeSimilarity=0.9938;PctRecOverlap=0.9958;SizeDiff=-41;StartDistance=0;EndDistance=14;GTMatch=0;TruScore=99;MatchId=3312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:48:57:0|1:47:0:0:43:./.:4:5:24:0:./.:46:4:0/1:197:658:.:6503:.
chr21	23817348	HG3_PB_SVrefine2Falcon1Dovetail_11861	T	ATAGGAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGCGCGGTGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAATAAATAAA	10	PASS	ClusterIDs=HG4_PB_HySA_27368:HG2_PB_pbsv_19076:HG2_PB_SVrefine2PB10Xhap12_13935:HG4_PB_SVrefine2PBcRDovetail_9601:HG4_PB_SVrefine2Falcon1Dovetail_11889:HG3_PB_assemblyticsfalcon_16021:HG3_PB_SVrefine2Falcon1Dovetail_11861:HG4_PB_pbsv_19010:HG2_PB_SVrefine2PBcRplusDovetail_6748:HG2_PB_HySA_34382;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11861:HG3_PB_assemblyticsfalcon_16021;NumExactMatchSVs=2;ClusterMaxShiftDist=0.245827;ClusterMaxSizeDiff=0.245827;ClusterMaxEditDist=0.264036;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=337;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=21:23817349-23817347;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9883;PctRecOverlap=0.9883;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3313.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:39:0|1:31:2:1:28:1|0:1:5:31:0:0/1:24:5:0/1:7:21:.:.:.
chr21	24760423	HG2_Ill_Cortex_5062	GAAC	ACAAACTACATTCATGAGTTTGGTGATGTGACTTCTCAAATGAAAGCTGGTTAAAAAAAGTTTATTTCAAATGAGAATTTTCTACTAAATACGCTGATGGAACAATGGAAGTAAAGCACATTCTCACACAGAGAGATGGAAACTGCTCCATAACTTGTAATGAGAACTGTGTGGGTGCTGCTAATTGAATTTGAGCCATGGGAACTTTTGTCTGACATTGAAAAGAATCTGAAATTAAACAGGAGAATAAAAATTTGTCTAAGCAAATTTTGGCAACTATTTCAGCAGCACTTATTTCTGGGCAGCATTTGTGGGTCATTCGGCAATAACATTCTCTATAGGTTTTCAATGAATTGCTCTTAGTAAATTGGATGTCAGAGATTTTATTTTGGAAAACTTCTTTATACTTCAATGATGCTTTGAACTTTTAATTTATGACCCTAATTGTATAATAGGAGGTGGTCTAAGCAGAGTGTTGCCAGGAAAAGCTATTTCCAATAATACAGCTGAGAAGATATTCTGAAAAATCCTTCTGTTATGAAACACTACAGATTGGCTATTAAAAAATGATTTACATCATTTTAAATATATGTCCTTGATGGAAGCAAACTAAAGGGAATATTCAAAGCTAAAAATAAAACAGCAAAATCAAGGAAGCTAATGGTCTCCAATACTAATAAATACCCTGAGAATCCAAAGACCTTAATATGTTGAAGGCAGGCTTGAGAAGATAAGGGAGAGCCTTGGATAAACACACAATGAGGAGTAGAGTCTAAAACTTCTACATCTATTCTGTCCAAAAAGATTTACATATTCACTGAGATAAAGAACTAGAAAAATAAAATTCACGTCTTAAAAGAAATAACAAGGAAATGTCTCTGTTTCTCCATGGTTTAAAGTGTTGGAAAAAACTCTCTCCAAAATCTCACAAGTACAATGAGCTCCTCAGGGAGTGCTGTGGCCACTAGTTACATCATTATATACTCCCCTAATAAAAGATGCATATTTAATTCTCTACCATTAAAAACTTTAATCTACAATTTAAACTCTCTCCACATAAATTTCTATTTCCATATGCTTTCACCACTAAATTCTGCCCAAATTTGAAAAAGCAATAAACATTACAGAAACTTCTCCCAAAAACTGGGAAAAAGAAAGCTCTTCCAAACTTATTATTGTATAAGGCCTTAATACCAAAATTTAATAAGGAACAGAAAGTAAAGTGATAATCTGTTTTTTTCAGTGAACATAAAAACAAAATCCTAAACA	20	PASS	ClusterIDs=HG2_PB_HySA_34403:HG2_PB_pbsv_19083:HG4_Ill_SVrefine2DISCOVARDovetail_13189:HG4_Ill_Cortex_2145:HG2_PB_SVrefine2PBcRplusDovetail_6752:HG2_Ill_SVrefine2DISCOVARplusDovetail_7797:HG2_Ill_Cortex_5062:HG2_10X_SVrefine210Xhap12_13308:HG2_PB_SVrefine2PB10Xhap12_13939:HG2_PB_PB10Xdip_18808:HG2_PB_SVrefine2Falcon1plusDovetail_7285:HG4_PB_SVrefine2PBcRDovetail_9604:HG4_PB_pbsv_19016:HG4_PB_SVrefine2Falcon1Dovetail_11894;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13308:HG2_Ill_Cortex_5062:HG2_Ill_SVrefine2DISCOVARplusDovetail_7797:HG2_PB_SVrefine2PBcRplusDovetail_6752:HG4_Ill_Cortex_2145:HG4_Ill_SVrefine2DISCOVARDovetail_13189;NumExactMatchSVs=6;ClusterMaxShiftDist=0.047619;ClusterMaxSizeDiff=0.0468384;ClusterMaxEditDist=0.182027;PBcalls=9;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=1265;DistBack=-1;DistForward=13941;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=21:24760427-24760422;PctSeqSimilarity=0.998;PctSizeSimilarity=1;PctRecOverlap=0.9976;SizeDiff=0;StartDistance=0;EndDistance=3;GTMatch=0;TruScore=99;MatchId=3315.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:27:87:0|1:27:2:0:40:0|1:41:0:0:16:0/1:32:20:0/1:44:52:.:1301:.
chr21	24975493	HG2_PB_SVrefine2Falcon1plusDovetail_7288	C	ATTTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCTGA	10	PASS	ClusterIDs=HG2_PB_HySA_34412:HG3_PB_assemblyticsfalcon_16033:HG4_PB_pbsv_19020:HG3_PB_SVrefine2Falcon1Dovetail_11867:HG2_PB_pbsv_19086:HG2_PB_HySA_34413:HG4_PB_SVrefine2PBcRDovetail_9606:HG2_PB_SVrefine2Falcon2Bionano_9430:HG2_PB_SVrefine2Falcon1plusDovetail_7288:HG4_PB_HySA_27385;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7288;NumExactMatchSVs=1;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.163636;ClusterMaxEditDist=0.210826;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=330;DistBack=12582;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=21:24975494-24975492;PctSeqSimilarity=0.994;PctSizeSimilarity=0.991;PctRecOverlap=0.988;SizeDiff=-3;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=99;MatchId=3316.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:54:0|1:37:0:0:43:0|1:20:0:0:5:0/1:33:9:0/1:6:28:.:.:.
chr21	24976840	HG2_PB_SVrefine2Falcon1plusDovetail_7289	C	CTCAGCCTTCTGCCATGATTGTGAGGCTTCCACAGCCATGTGGAACTGTAAGTCCAATTAAATCTCTATTTTGTAAATTGCCCAGTCTTGGATTTGTCTTTATCAGCAGTGTGAAACAGACTAAT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9607:HG4_PB_pbsv_19021:HG3_PB_assemblyticsfalcon_16034:HG2_PB_pbsv_19087:HG2_PB_HySA_34414:HG3_PB_SVrefine2Falcon1Dovetail_11868:HG4_Ill_svaba_23121:HG4_Ill_manta_4271:HG2_PB_SVrefine2Falcon2Bionano_9431:HG2_PB_SVrefine2Falcon1plusDovetail_7289:HG2_Ill_svaba_23188:HG2_Ill_SpiralSDKrefine_10138:HG2_Ill_SVrefine2DISCOVARplusDovetail_7801:HG2_10X_SVrefine210Xhap12_13311:HG2_PB_SVrefine2PBcRplusDovetail_6756;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13311:HG2_Ill_SVrefine2DISCOVARplusDovetail_7801:HG2_Ill_SpiralSDKrefine_10138:HG2_Ill_svaba_23188:HG2_PB_SVrefine2Falcon1plusDovetail_7289:HG2_PB_SVrefine2Falcon2Bionano_9431:HG4_Ill_manta_4271:HG4_Ill_svaba_23121;NumExactMatchSVs=8;ClusterMaxShiftDist=0.119522;ClusterMaxSizeDiff=0.110672;ClusterMaxEditDist=0.214559;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=124;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=0;REFWIDENED=21:24976841-24976840;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3317.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:26:0|1:40:0:0:26:0|1:33:0:0:10:0/1:15:14:./.:.:.:.:.:.
chr21	25300172	HG2_Ill_MetaSV_2984	C	CTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCAGCTAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACATGTGCCTCCCAGGCTCACGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATAACAGGTGTGTGCCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCTTGACCTCAGATAATCTGCCCACCTCGGCCTCCCAAAGTGCAGGGATTACAGGCATGAGCCACCATGCCTGGCCTAATATACACTTCTTAAATCAACTTAAATACAACTGTTTCTAGAATGTAGAATCCCATTTTTATACAAGAATTTCCAAATCGCTTTGGGGGATTGAAATCTTGTAGATAGAAATTCAATGGGAACAAGAGGATAGGGAGGACGGTGAGGGATAATGGACAGATATGGGAAGGAAAATATGTCACCTAAAATTAGATATTTACAAAGCTTTACAAAGTATTTTTAATTATCAAATGTTGTATTAAGACACAGAAAACATTATACTTGGAAACAGATGGAAGAAGGAATGGTTGTATATTTAAAAAGCCCAGACAACAGGGCTTACTCAACCATGATTGTTTTGGTTACTTTAATTATCAGTAAATGATACATTTGGTATCTCACTGTAATTTTGATTTGCATTTCTTTTTT	20	PASS	ClusterIDs=HG4_PB_HySA_27396:HG3_PB_assemblyticsfalcon_16038:HG3_PB_SVrefine2Falcon1Dovetail_11871:HG2_PB_pbsv_19090:HG4_PB_SVrefine2PBcRDovetail_9611:HG2_PB_HySA_34424:HG4_Ill_SVrefine2DISCOVARDovetail_13198:HG4_PB_pbsv_19026:HG3_Ill_SVrefine2DISCOVARDovetail_13387:HG2_PB_SVrefine2PBcRplusDovetail_6759:HG2_PB_SVrefine2PB10Xhap12_13946:HG2_Ill_SVrefine2DISCOVARplusDovetail_7805:HG2_Ill_MetaSV_2984:HG2_10X_SVrefine210Xhap12_13316:HG3_PB_SVrefine2PBcRDovetail_9371:HG2_PB_SVrefine2Falcon2Bionano_9435:HG2_PB_SVrefine2Falcon1plusDovetail_7292:HG4_Ill_GATKHCSBGrefine_12828:HG3_PB_pbsv_18775:HG2_PB_PB10Xdip_18815:HG4_PB_SVrefine2Falcon1Dovetail_11900:HG3_PB_HySA_28406:HG3_Ill_MetaSV_3136:HG4_Ill_MetaSV_3088;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13316:HG2_Ill_MetaSV_2984:HG2_Ill_SVrefine2DISCOVARplusDovetail_7805:HG2_PB_SVrefine2PB10Xhap12_13946:HG2_PB_SVrefine2PBcRplusDovetail_6759:HG3_Ill_SVrefine2DISCOVARDovetail_13387;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0445063;ClusterMaxSizeDiff=0.0445063;ClusterMaxEditDist=0.176833;PBcalls=16;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=706;DistBack=13696;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=293;REFWIDENED=21:25300173-25300465;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:0:24:1:26:./.:0:9:0:5:1/1:0:9:1/1:6:106:.:710:.
chr21	25411367	HG2_10X_SVrefine210Xhap12_13318	T	TTCAGCTATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_18816:HG2_PB_HySA_34427:HG4_PB_pbsv_19028:HG4_PB_SVrefine2Falcon1Dovetail_11901:HG2_PB_pbsv_19092:HG4_PB_SVrefine2PBcRDovetail_9612:HG3_PB_pbsv_18777:HG2_PB_SVrefine2PB10Xhap12_13947:HG2_PB_SVrefine2PBcRplusDovetail_6760:HG3_PB_SVrefine2Falcon1Dovetail_11872:HG2_PB_SVrefine2Falcon2Bionano_9436:HG2_PB_SVrefine2Falcon1plusDovetail_7293:HG3_Ill_GATKHCSBGrefine_12261:HG2_Ill_manta_5038:HG2_10X_SVrefine210Xhap12_13318;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13318:HG2_Ill_manta_5038:HG3_Ill_GATKHCSBGrefine_12261;NumExactMatchSVs=3;ClusterMaxShiftDist=0.201613;ClusterMaxSizeDiff=0.177419;ClusterMaxEditDist=0.274194;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=112;DistBack=5850;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=21:25411368-25411384;PctSeqSimilarity=0.9224;PctSizeSimilarity=0.855;PctRecOverlap=0.8626;SizeDiff=-19;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=88;MatchId=3319.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:75:1/1:0:15:1:14:1/1:0:15:0:12:1/1:0:9:./.:.:.:.:.:.
chr21	25576650	HG2_Ill_GATKHCSBGrefine_12424	T	TTTGGTGTTACTCTATCGAATTCACAGAATTAACAAATGCTTGTCCTCCTTCTTTTACCACTCAAATGTTATCTTAATCATAAAAGAAAATTATAAAACCAGCAATGAGTTAAGACA	20	PASS	ClusterIDs=HG4_Ill_GATKHCSBGrefine_12831:HG2_PB_pbsv_19093:HG3_PB_pbsv_18778:HG3_Ill_manta_4098:HG3_Ill_Spiral_19113:HG3_Ill_SVrefine2DISCOVARDovetail_13389:HG3_Ill_MetaSV_3137:HG3_Ill_GATKHCSBGrefine_12262:HG2_PB_SVrefine2Falcon2Bionano_9437:HG2_PB_SVrefine2Falcon1plusDovetail_7294:HG2_Ill_manta_5039:HG2_Ill_SpiralSDKrefine_10147:HG2_Ill_MetaSV_2985:HG2_Ill_GATKHCSBGrefine_12424:HG2_10X_SVrefine210Xhap12_13320:HG2_Ill_breakscan11_4942:HG4_Ill_manta_4274:HG4_Ill_SVrefine2DISCOVARDovetail_13202:HG4_Ill_MetaSV_3089:HG4_Ill_GATKHC_29773;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13320:HG2_Ill_GATKHCSBGrefine_12424:HG2_Ill_MetaSV_2985:HG2_Ill_SpiralSDKrefine_10147:HG2_Ill_manta_5039:HG2_PB_SVrefine2Falcon1plusDovetail_7294:HG2_PB_SVrefine2Falcon2Bionano_9437:HG3_Ill_GATKHCSBGrefine_12262:HG3_Ill_MetaSV_3137:HG3_Ill_SVrefine2DISCOVARDovetail_13389:HG3_Ill_Spiral_19113:HG3_Ill_manta_4098;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0669456;ClusterMaxSizeDiff=0.0585774;ClusterMaxEditDist=0.130612;PBcalls=4;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=116;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=4;REFWIDENED=21:25576651-25576654;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3320.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:31:0|1:33:1:3:26:1|0:0:38:26:0:0/1:34:28:./.:.:.:.:.:.
chr21	26354234	HG2_PB_pbsv_19095	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGTGGAGTGCAGTGGCGCGACCTCGGCCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTTCCCGAGTAGTGCGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTAGAGAGTACGGGGTTTCACCGTTGTTAGCCAGGATGGTCTCGACTCTCCTGACCTCGTGATACCGCCCGCTCGGCCTCCACAAATGACTTGGGATTAACAAGGCGTGACGGGGTAGCCACCGCGCCCGGCCGCATCTATAG	20	PASS	ClusterIDs=HG3_PB_HySA_28413:HG2_PB_pbsv_19095:HG4_PB_pbsv_19033:HG2_Ill_breakscan11_4943:HG3_PB_pbsv_18779:HG4_Ill_MetaSV_3093:HG4_PB_SVrefine2PBcRDovetail_9617:HG2_Ill_MetaSV_2987:HG4_PB_SVrefine2Falcon1Dovetail_11906:HG3_PB_SVrefine2PBcRDovetail_9374:HG4_PB_HySA_27404;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_19095;NumExactMatchSVs=1;ClusterMaxShiftDist=0.243641;ClusterMaxSizeDiff=0.243641;ClusterMaxEditDist=0.345646;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=354;DistBack=-3;DistForward=7078;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=21:26354223-26354237;PctSeqSimilarity=0.9573;PctSizeSimilarity=0.9774;PctRecOverlap=0.9549;SizeDiff=8;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=96;MatchId=3321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:41:./.:25:6:8:22:./.:34:0:0:2:0/1:27:11:0/1:10:20:.:.:.
chr21	26497420	HG2_Ill_GATKHCSBGrefine_12426	T	TAAGGAAGGATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4945:HG4_PB_pbsv_19034:HG4_PB_HySA_27405:HG3_PB_pbsv_18782:HG3_PB_SVrefine2Falcon1Dovetail_11875:HG2_PB_pbsv_19097:HG4_Ill_GATKHCSBGrefine_12834:HG3_Ill_MetaSV_3138:HG4_PB_SVrefine2PBcRDovetail_9618:HG2_Ill_GATKHCSBGrefine_12426:HG2_PB_SVrefine2Falcon1plusDovetail_7295:HG2_Ill_MetaSV_2988:HG4_PB_SVrefine2Falcon1Dovetail_11908:HG2_PB_HySA_34436;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12426:HG4_Ill_GATKHCSBGrefine_12834;NumExactMatchSVs=2;ClusterMaxShiftDist=0.117274;ClusterMaxSizeDiff=0.116904;ClusterMaxEditDist=0.311377;PBcalls=9;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=319;DistBack=-45;DistForward=1;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=21:26497421-26497431;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:27:0|1:19:0:0:21:0|1:39:0:0:15:0/1:39:19:0/1:11:23:.:.:.
chr21	26682413	HG2_Ill_SVrefine2DISCOVARplusDovetail_7808	G	GTATATATATATATATATATATATATATATATATATACACACACACACATATATATACACATACACA	20	PASS	ClusterIDs=HG4_PB_pbsv_19035:HG4_Ill_GATKHC_29780:HG4_Ill_GATKHCSBGrefine_12835:HG2_Ill_GATKHC_29814:HG2_Ill_GATKHCSBGrefine_12428:HG2_Ill_manta_5040:HG2_Ill_SpiralSDKrefine_10154:HG2_PB_pbsv_19098:HG3_PB_pbsv_18783:HG4_Ill_scalpel_17120:HG2_Ill_250bpfermikitraw_24777:HG4_Ill_250bpfermikitraw_24416:HG4_Ill_150bpfermikitraw_23485:HG4_Ill_svaba_23135:HG2_Ill_svaba_23206:HG2_PB_PB10Xdip_18820:HG2_PB_SVrefine2PBcRplusDovetail_6764:HG2_PB_SVrefine2PB10Xhap12_13950:HG4_PB_HySA_27406:HG2_PB_HySA_34437:HG3_PB_HySA_28418:HG3_PB_SVrefine2PBcRDovetail_9376:HG3_Ill_Spiral_19115:HG3_Ill_SVrefine2DISCOVARDovetail_13393:HG3_Ill_GATKHC_29722:HG3_Ill_GATKHCSBGrefine_12264:HG3_Ill_250bpfermikitraw_24082:HG3_Ill_150bpfermikitraw_23367:HG2_PB_SVrefine2Falcon2Bionano_9439:HG2_Ill_SVrefine2DISCOVARplusDovetail_7808:HG2_Ill_GATKHCSBGrefine_12427:HG2_Ill_250bpfermikitraw_24776:HG2_Ill_150bpfermikitraw_23326:HG2_10X_SVrefine210Xhap12_13329:HG3_Ill_svaba_23432:HG2_Ill_svaba_23205:HG3_PB_SVrefine2Falcon1Dovetail_11876;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13329:HG2_Ill_150bpfermikitraw_23326:HG2_Ill_250bpfermikitraw_24776:HG2_Ill_GATKHCSBGrefine_12427:HG2_Ill_SVrefine2DISCOVARplusDovetail_7808:HG2_PB_SVrefine2Falcon2Bionano_9439:HG3_Ill_150bpfermikitraw_23367:HG3_Ill_250bpfermikitraw_24082:HG3_Ill_GATKHCSBGrefine_12264:HG3_Ill_GATKHC_29722:HG3_Ill_SVrefine2DISCOVARDovetail_13393:HG3_Ill_Spiral_19115:HG3_PB_SVrefine2PBcRDovetail_9376;NumExactMatchSVs=13;ClusterMaxShiftDist=0.294574;ClusterMaxSizeDiff=0.294574;ClusterMaxEditDist=0.294574;PBcalls=12;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=66;DistBack=10174;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=20;REFWIDENED=21:26682414-26682433;PctSeqSimilarity=0.9848;PctSizeSimilarity=0.9697;PctRecOverlap=0.9701;SizeDiff=2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3323.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:65:1/1:2:35:4:28:./.:0:18:3:15:1/1:0:37:./.:.:.:.:.:.
chr21	28221340	HG3_PB_SVrefine2Falcon1Dovetail_11881	A	ACCGGGAAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_PB_HySA_34454:HG4_PB_pbsv_19039:HG3_PB_pbsv_18789:HG2_PB_pbsv_19104:HG4_PB_assemblyticsfalcon_15837:HG2_Ill_breakscan11_4946:HG3_PB_SVrefine2Falcon1Dovetail_11881:HG4_PB_SVrefine2Falcon1Dovetail_11912;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11881;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0661654;ClusterMaxSizeDiff=0.0511278;ClusterMaxEditDist=0.227474;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=325;DistBack=28988;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=21:28221341-28221356;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9939;PctRecOverlap=0.9939;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:23:./.:32:6:7:10:./.:27:0:1:3:0/1:29:6:0/1:7:33:.:.:.
chr21	28561023	HG3_PB_SVrefine2PBcRDovetail_9383	T	TAAAAAATCTTTACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCAGCTAAACGGTGAAACCCCGTCTCTACTAAAATACAAAAAATTAGCCGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGAGGCTGAGGCAGGAGAATGGCGTGAACCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7300:HG3_PB_pbsv_18791:HG4_PB_assemblyticsfalcon_15841:HG2_PB_HySA_34457:HG4_PB_pbsv_19040:HG4_PB_SVrefine2Falcon1Dovetail_11913:HG2_PB_pbsv_19106:HG3_PB_SVrefine2Falcon1Dovetail_11882:HG3_PB_SVrefine2PBcRDovetail_9383:HG3_PB_HySA_28434;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_9383;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0824427;ClusterMaxSizeDiff=0.0824427;ClusterMaxEditDist=0.258929;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=317;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=21:28561024-28561038;PctSeqSimilarity=0.983;PctSizeSimilarity=0.9665;PctRecOverlap=0.9635;SizeDiff=-11;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:43:0|1:32:0:0:36:./.:33:0:0:4:./.:41:5:0/1:6:29:.:.:.
chr21	28595871	HG2_PB_SVrefine2Falcon1plusDovetail_7302	T	TAAAACTCTATTTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4947:HG2_PB_pbsv_19108:HG3_PB_pbsv_18793:HG3_PB_HySA_28437:HG3_Ill_MetaSV_3144:HG3_Ill_SVrefine2DISCOVARDovetail_13401:HG3_PB_SVrefine2PBcRDovetail_9385:HG3_PB_SVrefine2Falcon1Dovetail_11884:HG2_PB_SVrefine2Falcon1plusDovetail_7302;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7302:HG3_PB_SVrefine2Falcon1Dovetail_11884:HG3_PB_SVrefine2PBcRDovetail_9385;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0515933;ClusterMaxSizeDiff=0.0515933;ClusterMaxEditDist=0.195846;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=1189;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=21:28595872-28595885;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3328.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:54:0|1:37:0:0:38:1|0:0:7:21:0:0/1:31:10:0/1:6:45:.:.:.
chr21	28866798	HG2_10X_SVrefine210Xhap12_13337	C	CTCTGATTATTTCATCAATATAAATTGCAGGATGAACTATGTAAATATGCATTTTGATGCTGAATTTACTATACATCTACTTAAATCTTTTTTTATACATCTACTTAAATACTTTACTATACATCTACTTAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13337:HG3_PB_HySA_28445:HG3_PB_pbsv_18796:HG2_PB_HySA_34464:HG2_PB_pbsv_19109:HG2_Ill_SVrefine2DISCOVARplusDovetail_7817;NumClusterSVs=6;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13337:HG2_Ill_SVrefine2DISCOVARplusDovetail_7817;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0879121;ClusterMaxSizeDiff=0.0735294;ClusterMaxEditDist=0.234875;PBcalls=4;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=132;DistBack=48823;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=91;REFWIDENED=21:28866799-28866889;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:40:./.:13:24:15:13:1|0:1:24:10:0:0/1:18:23:./.:.:.:.:.:.
chr21	29953630	HG3_PB_SVrefine2PBcRDovetail_9388	A	AAGGTACCCAGGGCAGAAGGAGTCTGGACTGAGCGTGGTACAATTGCACCACAGCTGAGGTACCCAGGGCAGAAGGAGTCTGGACTGAGCGTGGTACAATTGCACCACAGCTGAGGTACCCAGGGCAGAAGGAGTCTGGACTGAGCGTGGTACAATTGCACCACAGCTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7304:HG2_PB_HySA_34481:HG4_PB_pbsv_19045:HG2_PB_PB10Xdip_18847:HG2_PB_pbsv_19112:HG4_PB_HySA_27433:HG4_PB_SVrefine2PBcRDovetail_9625:HG4_PB_SVrefine2Falcon1Dovetail_11915:HG3_PB_SVrefine2PBcRDovetail_9388:HG3_PB_SVrefine2Falcon1Dovetail_11888:HG2_PB_SVrefine2PBcRplusDovetail_6771:HG2_PB_SVrefine2PB10Xhap12_13960:HG2_PB_SVrefine2Falcon2Bionano_9446;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7304:HG4_PB_SVrefine2PBcRDovetail_9625:HG4_PB_SVrefine2Falcon1Dovetail_11915:HG3_PB_SVrefine2PBcRDovetail_9388:HG3_PB_SVrefine2Falcon1Dovetail_11888:HG2_PB_SVrefine2PBcRplusDovetail_6771:HG2_PB_SVrefine2PB10Xhap12_13960:HG2_PB_SVrefine2Falcon2Bionano_9446;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0466472;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.315186;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=168;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=171;REFWIDENED=21:29953631-29953801;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3330.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:98:1/1:0:35:1:32:./.:1:1:1:0:1/1:1:11:./.:.:.:.:.:.
chr21	30382777	HG2_PB_SVrefine2Falcon2Bionano_9448	C	CAAAATTACCCGGGTGTGTTGGTGCGTGCCTGAAGTCCCAGCTACTTGAGAGGCTCAGGTGGGAGGACTGCTTGAGCCCAGAAGGTGGAGGTTGTAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCTGTCTCAAACAAACAAACAAACAAACAACCTAAACCATAGTTCCTTTTATCAATCTCTTCTTTTACAGGTTTCAAGCTTTATTTGTTTGTTTGTTTGTTTTTTTGAGACGGAGTCTTGCTTTGTGCCCAGGATGGAGTGCAGTGGTGCGATCTTAGCTCACTGCAACCTCCACCTCCCGGACTCAAACAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGATTACAGGCACCCACCACCACCCCCAGCTAATTTTTATATTTTTATTTTATTATTTGTTTATTTATTTATTTTGGGATGCAGTTATCGCTCTTGTTGCCTAGGCTGGAGCTCAGTGTCGTGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTCCAAGCAATTCTCCTGCCTCAGCCTCCCAAGGGGAGAGATTACAGGCACATGCCACCATGCCTGGCCAATTTTTTTGTGTTTTTGTATCACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCAGCCTAAAATATCTTGATTAGAAAGGATTTCTCTACTGCAGGATTATTTTAAAATTCTTCTATTTTTTACA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9626:HG2_PB_pbsv_19116:HG3_PB_pbsv_18801:HG2_PB_PB10Xdip_18852:HG4_PB_pbsv_19049:HG2_Ill_breakscan11_4948:HG4_PB_HySA_27435:HG3_Ill_MetaSV_3147:HG2_Ill_MetaSV_2994:HG3_Ill_GATKHCSBGrefine_12270:HG4_Ill_MetaSV_3098:HG4_Ill_GATKHCSBGrefine_12845:HG4_PB_SVrefine2Falcon1Dovetail_11918:HG2_PB_assemblyticsfalcon_16165:HG2_PB_assemblyticsPBcR_15675:HG3_PB_SVrefine2PBcRDovetail_9390:HG3_Ill_SVrefine2DISCOVARDovetail_13410:HG2_10X_SVrefine210Xhap12_13343:HG2_PB_SVrefine2PBcRplusDovetail_6775:HG2_PB_SVrefine2PB10Xhap12_13963:HG2_PB_SVrefine2Falcon2Bionano_9448:HG2_PB_SVrefine2Falcon1plusDovetail_7307:HG2_Ill_SVrefine2DISCOVARplusDovetail_7828:HG3_PB_SVrefine2Falcon1Dovetail_11891;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7828:HG2_PB_SVrefine2Falcon1plusDovetail_7307:HG2_PB_SVrefine2Falcon2Bionano_9448:HG2_PB_SVrefine2PB10Xhap12_13963:HG2_PB_SVrefine2PBcRplusDovetail_6775;NumExactMatchSVs=5;ClusterMaxShiftDist=0.198925;ClusterMaxSizeDiff=0.198925;ClusterMaxEditDist=0.284943;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=749;DistBack=11832;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=21:30382778-30382831;PctSeqSimilarity=0.9943;PctSizeSimilarity=1;PctRecOverlap=0.9546;SizeDiff=0;StartDistance=-34;EndDistance=-34;GTMatch=0;TruScore=98;MatchId=3331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:23:1:21:./.:1:8:0:10:1/1:0:24:1/1:3:133:.:.:.
chr21	30490416	HG2_PB_SVrefine2PB10Xhap12_13964	A	ATTTTTTTTGAGACGGACTCTTGCACTGTTGCCCAGGCTGGAGTACAGTGGCATGATCTCAGATCACTGCAACCTCCACCTCCTGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCATGTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGAATTTCTCCATATGGTATGAACCCCCACAATCTGAGACAGGTCTCAGTTAATTTAGAAAGTTTATTTTGCTGGGCCGGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGACCAAGGCGGGCAGATCACGAGGTCAGCAGATGGAGACCATCCTGGCCAACATGGTGAAACCCTGTCTCCACTAGAATACAAAAAAACTAGTCTGGCGTGGTGGTGGGTGCCTGTAGTCCCGGCTGCTCTGGAGGCTGAGGCAGGGGAATCGCCTGAACCCGGGAGGTAGAGGTTGCAGTGAGCCGAGATTACACCACTGCACTCTAGCCTGGTGACAGAGCCAGACACTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGTTTATTTTGTCAAGATTGAGGATACACCTGTGACACGGCCTCAGGAAGTCCTGACAACATGTGCCCAAGGTGGTTGGGGCACAGCTTAGTGTTATACATTTTAGGGAGACATGAGACATCAATCAATATATGTAAGAAGTACATTGGTTCAATCTAGAAAGGCGGGACAACTTGGAGCAAAGGCAGGAAGACTGGAAGTAGGGATGGGGCTTCCAGGTCACAGATAGGTGAGAGATGAAGGGTTGCATTCCTTTGAGTTTCTGATTAGCCTTTCCAAGGGAGGCAATCAGATATGCATCTATCTGAGTAAGCAGAGGGGTGACTTTGAATAGAATGGGAGGCAGGTTTGCCCTAAGCAGTTTTCCAGCTTGACTTTTCCTTTTAGCCCGGTGATTTAGGGGCCCCAAGATTTATTTTCCTTTCACATTGGCCAGTCTGGTCTCAAACTCCTGACCTCAGGTGATCCACTCGCCTCTGCCTCCTGAAGTGCTGGGAATGCAGGCGTGAACCACCGTGCCCAGCCAGAGAGTATTAATTTTATTTTATTGTATTTTATTTTTTTGAGACAGAGTCTCGTTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAACTCCACCTGCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCCGCCACCACGCCTGCATTTTTTTTTTTTTTTTTTTTTGGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCTGTCTCCTGACCTCGTGATCTGCCCGTCTCGGCCTCCCAGTGCTGGGATTACAGGCATGAGCCACCTCGCCCGGCTGAGAGTATTAATTTTAAATCTCTCCCTTCCATATGAGGAAATTAAGGCTCAGAGACATTAAATAACAACATTCTTGTAGCCAAATGAGTTGAGACAAAACCAAATGAAAGGATTTGAAGACAGTTTGATGCCATTCATGAAGCTAGAGTTCTCTTTCTTAGTCTGTGTGTTAATGGCTTTTTCCACTTAAAGGCAAATTGCTAAGGTGTTCCCCACCCCCACACTCCACCTCTACGTCATTTCACTTTTGACCCCACCTCTGAAAACATTGAATGTATCTAAATACATAATCAAATGAAAAAGTTTGACTTGGTGACTTTATTAAGAAAATACTGCCAGCTGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGACGAGACAGGTGGACCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCGTCTGTACTAAAAATACAAAAAATTAGCCGGGCATGGTGGTGGGCGCCTGTAGTCCCAGCTACTCAGGTGGCTGAGGCAGGAGAATGGCAGGAACCCGGGAGGCGGAGTTCCCAGTGAGCCCAGATCACACCACTGCACTCCAGTCTGGGTGATAGAGCGAGACTCCGTCTCAAAAAAAAAGAAAAAAAGGAAAGAAAATACTGCCACCATCAACAGGAAAATGTTTCCATAGCAGCAGCCTCTCATTTTGATGATTGCTGCAACTCCCCTTGTCTTTGGAGCTTTGTGTTTGAAATAAAGGTATGCATTATTAAACAAAAAAAGCCTTATTCAAGATGAGCATGACCACAACCAGATTGGAGAGACATCTTTGTGACACTGTGCAGGAATGAAGTCATACCCCAAATCGACTGCACCCTTTGGGTAGCCTATGTTGTCACCCCACAACCAACTTCGAGTTAAGCCTCACTGCCTCTTTACATCTCCAGAATACAGAACTCCAGAAGCATTGCGGAATAATGTGGATTTTACTGATGTTTCATAGTGGTACGGGGAGGACGGTTTCATCACATGGCCCACAGGAAAGCTTAGATTGTTTTTTTGGACCTCTGTCTGTGACAATTAATGTTTTTCTTCTCTTCTCTCCCTGTCCCCTTTCTCCCCTCCCTTTTCCTCACACAGCTTTTAAAATCCCCTTTAGTATCTGTAGCCACTCGGCTGCAGCCTGAAGAATATATGTTCCCCCACCTCCCACCAGCAAAACAACAGCCTGTGGTAAACTATGAGCACGCATGTTCTTCTTACATGCCTTTTGGGGGCAAGGATGCCTCAATTCACTTGGCCATAGCTGTGAGTTTGGGATATTGATTCTTCACAAAAACAGATCTAAAGTTAAAAGGTTAACTTGGGGCTGGGTGCGGTAGCTCACTCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGATCTGAGACCATCCTGCCTAACATGATGAAACCCTGTCTCTACTAAAAATACAAAAAGAATTAGCTGGGTGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGCGGAGCTTGCAGTGAGCTGAGATCGAGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCTGTCACAAAAAAAAGGTTATCTTGGACCTGGGTCTGGCAGTAGACAAAACTACAAATATTGGCAAAGTAAACCAGGATCTCTTAACTTTTCTTTTTTCT	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_13220:HG4_PB_pbsv_19050:HG2_PB_pbsv_19117:HG3_PB_pbsv_18803:HG4_PB_HySA_27436:HG2_PB_PB10Xdip_18853:HG2_PB_assemblyticsPBcR_15676:HG4_PB_SVrefine2Falcon1Dovetail_11919:HG3_Ill_SVrefine2DISCOVARDovetail_13412:HG3_PB_SVrefine2PBcRDovetail_9392:HG2_PB_SVrefine2Falcon2Bionano_9449:HG2_PB_SVrefine2PBcRplusDovetail_6776:HG2_PB_SVrefine2PB10Xhap12_13964:HG3_PB_SVrefine2Falcon1Dovetail_11892:HG2_PB_SVrefine2Falcon1plusDovetail_7308:HG2_10X_SVrefine210Xhap12_13344:HG4_PB_SVrefine2PBcRDovetail_9627:HG2_Ill_SVrefine2DISCOVARplusDovetail_7829;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13964:HG2_PB_SVrefine2PBcRplusDovetail_6776;NumExactMatchSVs=2;ClusterMaxShiftDist=0.17351;ClusterMaxSizeDiff=0.17351;ClusterMaxEditDist=0.223039;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=3148;DistBack=28243;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=195;REFWIDENED=21:30490417-30490611;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9987;PctRecOverlap=0.9699;SizeDiff=-4;StartDistance=-93;EndDistance=-93;GTMatch=0;TruScore=98;MatchId=3333.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:94:1/1:0:22:0:24:./.:0:5:0:3:1/1:0:35:1/1:5:394:.:3205:.
chr21	32784221	HG2_PB_SVrefine2Falcon2Bionano_9454	T	TTCGTCAGCTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAGTGGAGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4950:HG3_PB_pbsv_18811:HG2_PB_assemblyticsPBcR_15692:HG2_PB_assemblyticsfalcon_16181:HG3_PB_HySA_28483:HG4_PB_pbsv_19058:HG2_PB_PB10Xdip_18861:HG2_PB_pbsv_19126:HG2_PB_HySA_34501:HG4_Ill_GATKHCSBGrefine_12853:HG3_PB_SVrefine2PBcRDovetail_9398:HG3_Ill_MetaSV_3150:HG3_Ill_GATKHCSBGrefine_12276:HG2_PB_SVrefine2PBcRplusDovetail_6782:HG2_PB_SVrefine2PB10Xhap12_13972:HG2_PB_SVrefine2Falcon2Bionano_9454:HG2_Ill_MetaSV_2997:HG2_Ill_GATKHCSBGrefine_12443:HG2_10X_SVrefine210Xhap12_13354:HG2_PB_SVrefine2Falcon1plusDovetail_7314:HG3_PB_SVrefine2Falcon1Dovetail_11898:HG4_PB_SVrefine2Falcon1Dovetail_11924;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13354:HG2_Ill_GATKHCSBGrefine_12443:HG2_Ill_MetaSV_2997:HG2_PB_SVrefine2Falcon2Bionano_9454:HG2_PB_SVrefine2PB10Xhap12_13972:HG2_PB_SVrefine2PBcRplusDovetail_6782:HG3_Ill_GATKHCSBGrefine_12276:HG3_Ill_MetaSV_3150:HG3_PB_SVrefine2PBcRDovetail_9398:HG4_Ill_GATKHCSBGrefine_12853;NumExactMatchSVs=10;ClusterMaxShiftDist=0.139905;ClusterMaxSizeDiff=0.139905;ClusterMaxEditDist=0.246875;PBcalls=15;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=313;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=21:32784222-32784235;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3336.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:./.:0:4:0:26:./.:0:6:0:4:1/1:0:17:1/1:2:61:.:.:.
chr21	32875902	HG2_PB_SVrefine2PBcRplusDovetail_6783	A	AGGAGGGGAAGGAGAAGGGGAGGGGAGAGGAGGGGAGGGGAGAGGAGTGGAAGGGAGGGGAGAGGAGTGGAGGGGAGGGGAGGGGAAGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_18862:HG2_PB_assemblyticsPBcR_15694:HG2_PB_assemblyticsfalcon_16183:HG4_PB_SVrefine2PBcRDovetail_9635:HG3_PB_HySA_28485:HG2_PB_pbsv_19127:HG4_PB_pbsv_19060:HG2_PB_HySA_34503:HG4_PB_HySA_27451:HG3_PB_SVrefine2PBcRDovetail_9399:HG2_PB_SVrefine2PBcRplusDovetail_6783:HG2_PB_SVrefine2PB10Xhap12_13973:HG2_PB_SVrefine2Falcon2Bionano_9455:HG2_PB_SVrefine2Falcon1plusDovetail_7315:HG3_PB_SVrefine2Falcon1Dovetail_11899:HG4_PB_SVrefine2Falcon1Dovetail_11925;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9455:HG2_PB_SVrefine2PB10Xhap12_13973:HG2_PB_SVrefine2PBcRplusDovetail_6783:HG3_PB_SVrefine2PBcRDovetail_9399;NumExactMatchSVs=4;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.192;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=122;DistBack=24;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=28;REFWIDENED=21:32875899-32875926;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3337.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:./.:0:0:0:6:./.:0:1:0:1:./.:5:2:./.:.:.:.:.:.
chr21	33396658	HG4_PB_SVrefine2Falcon1Dovetail_11928	G	GTGTATTAGTCAGGGTTCTCTAGAGGGACAGAATTAATAGGATATATATATATATGTATATATATGTATGTGTGTATTTACATATATTTATGTGTGTTGTGGGATCTTGTGATTGTGTGAGTTAATACTATTTAATATACTCCCCTTTATACATATATACGTATATATACATATATACGTATATA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7843:HG3_PB_SVrefine2Falcon1Dovetail_11902:HG2_Ill_SVrefine2DISCOVARplusDovetail_7844:HG3_PB_pbsv_18814:HG4_PB_pbsv_19062:HG2_PB_pbsv_19129:HG2_Ill_MetaSV_2999:HG2_PB_assemblyticsfalcon_16191:HG2_PB_assemblyticsPBcR_15702:HG2_10X_SVrefine210Xhap12_13357:HG4_PB_SVrefine2Falcon1Dovetail_11928:HG2_PB_SVrefine2PBcRplusDovetail_6786:HG2_PB_SVrefine2PB10Xhap12_13977:HG2_PB_SVrefine2Falcon2Bionano_9457:HG2_PB_SVrefine2Falcon1plusDovetail_7318;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7843:HG4_PB_SVrefine2Falcon1Dovetail_11928:HG2_PB_SVrefine2PBcRplusDovetail_6786:HG2_PB_SVrefine2PB10Xhap12_13977:HG2_PB_SVrefine2Falcon2Bionano_9457:HG2_PB_SVrefine2Falcon1plusDovetail_7318;NumExactMatchSVs=6;ClusterMaxShiftDist=0.203655;ClusterMaxSizeDiff=0.203655;ClusterMaxEditDist=0.240209;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=184;DistBack=47886;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9;REFWIDENED=21:33396659-33396667;PctSeqSimilarity=0.9698;PctSizeSimilarity=0.9388;PctRecOverlap=0.9289;SizeDiff=-12;StartDistance=-8;EndDistance=-8;GTMatch=1;TruScore=94;MatchId=3338.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:34:./.:9:18:1:9:1/1:0:5:0:14:1/1:0:12:./.:.:.:.:1886:.
chr21	33704862	HG2_PB_pbsv_19133	T	TATGTAAAAAAAACAAGACAAAAAAAAAAAAAAAAAAAATCCCCAAATCAAAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9403:HG2_PB_assemblyticsfalcon_16195:HG4_PB_HySA_27461:HG2_PB_pbsv_19133:HG2_PB_HySA_34519:HG2_PB_assemblyticsPBcR_15706:HG3_PB_HySA_28497;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_19133;NumExactMatchSVs=1;ClusterMaxShiftDist=0.206186;ClusterMaxSizeDiff=0.185567;ClusterMaxEditDist=0.376238;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=52;DistBack=-17;DistForward=44;DistMin=-17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=173;REFWIDENED=21:33704760-33704932;PctSeqSimilarity=0.9325;PctSizeSimilarity=0.9038;PctRecOverlap=0.3585;SizeDiff=5;StartDistance=31;EndDistance=31;GTMatch=1;TruScore=73;MatchId=3339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:1/1:5:26:0:23:./.:11:1:7:2:./.:5:0:./.:.:.:.:.:.
chr21	33855241	HG3_PB_SVrefine2PBcRDovetail_9405	A	ACTGCAGCCTCAATCTTCCAACTCAAGCGATCCTCCTGTCTCAGCCACCCAAGTAGCTGGGACTACAGG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13364:HG3_PB_pbsv_18821:HG2_PB_HySA_34525:HG2_PB_pbsv_19137:HG2_PB_PB10Xdip_18870:HG4_PB_SVrefine2PBcRDovetail_9640:HG4_PB_SVrefine2Falcon1Dovetail_11932:HG4_Ill_scalpel_17165:HG4_Ill_manta_4285:HG4_Ill_SVrefine2DISCOVARDovetail_13235:HG4_Ill_Krunchall_25508:HG4_Ill_GATKHC_29850:HG4_Ill_GATKHCSBGrefine_12859:HG4_Ill_150bpfermikitraw_23545:HG3_PB_SVrefine2PBcRDovetail_9405:HG3_PB_SVrefine2Falcon1Dovetail_11906:HG3_Ill_scalpel_17928:HG3_Ill_SVrefine2DISCOVARDovetail_13428:HG3_Ill_GATKHC_29801:HG3_Ill_GATKHCSBGrefine_12282:HG2_PB_SVrefine2PBcRplusDovetail_6790:HG2_PB_SVrefine2PB10Xhap12_13982:HG2_PB_SVrefine2Falcon1plusDovetail_7324:HG2_Ill_scalpel_17569:HG2_Ill_SVrefine2DISCOVARplusDovetail_7849:HG2_Ill_Krunchall_25171:HG2_Ill_GATKHC_29890:HG2_Ill_GATKHCSBGrefine_12450;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13364:HG4_PB_SVrefine2PBcRDovetail_9640:HG4_PB_SVrefine2Falcon1Dovetail_11932:HG4_Ill_scalpel_17165:HG4_Ill_manta_4285:HG4_Ill_SVrefine2DISCOVARDovetail_13235:HG4_Ill_Krunchall_25508:HG4_Ill_GATKHC_29850:HG4_Ill_GATKHCSBGrefine_12859:HG4_Ill_150bpfermikitraw_23545:HG3_PB_SVrefine2PBcRDovetail_9405:HG3_PB_SVrefine2Falcon1Dovetail_11906:HG3_Ill_scalpel_17928:HG3_Ill_SVrefine2DISCOVARDovetail_13428:HG3_Ill_GATKHC_29801:HG3_Ill_GATKHCSBGrefine_12282:HG2_PB_SVrefine2PBcRplusDovetail_6790:HG2_PB_SVrefine2PB10Xhap12_13982:HG2_PB_SVrefine2Falcon1plusDovetail_7324:HG2_Ill_scalpel_17569:HG2_Ill_SVrefine2DISCOVARplusDovetail_7849:HG2_Ill_Krunchall_25171:HG2_Ill_GATKHC_29890:HG2_Ill_GATKHCSBGrefine_12450;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0857143;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.285714;PBcalls=11;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=68;DistBack=-68;DistForward=-1;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=69;REFWIDENED=21:33855242-33855310;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3340.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:50:1/1:3:22:2:27:1/1:0:11:1:7:1/1:0:27:./.:.:.:.:.:.
chr21	34205308	HG3_PB_SVrefine2PBcRDovetail_9407	G	GTCTTTTTTTTTTGAGACAGAGTCTTTCTCTGTCGCCGAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCTTTCCCAGTAGCTGGGACTACAGGCGCCCGCCAGCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGGCAGGATGGTCTCGATCTCCTGACTTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCCTGAAGTGCCCAATTGTATTTCTTTAAATTTACTGAAGTACAAAATTTAAGGTAGGAAGAAGATGATAAGAACTTTTCCCAGGAAAGTTTCAATGTGATCAGCCCAACAGTGAGATGGCTCTGTAAACATCCAATCCATGGTTACACGCCATTAGCTCAAGAAAAGAGATGAGAGCGTTGCTATTTCTTCCACTAGATGGCAATGTTTCTCTGCACACCAACCAGACACGCAGGCTCTCCCGCAAGGTAGCTAATGTCCCCTGGGAGGCGTCCCGGGCTGGCAGCACCTGCTTCCCGACCCAAGGAGCCACCTACGACGTGGTACAGGCTTCTACTTACCTGGAGGAAGGAGAGGTGCTGAGAGTCCCCTGAGCCTGTGATTAAGAACTAGGGAAGCAAGCGAGTCAAAGAGGAGGGAGGGTATTTCCAGCATGCAAGCCCTTCAGTGAAAATACACCCGAAGCGAATGCCTTTCCCAGGGGGTATCTTTGGACCTAATTCAGGATTTGAAATGGAGCTTTCTTTCCTTCTTCCTTTATCCACTTGCCTTGGAAAGCATCTGAATAATAGGCAGTGCTGCTTTAGGTCTGAGTATGACCCAGCTAGAGGTCAGTTCAATTTACAAGATGCTCAGTTTATGTCATTGCACCATTAAAAGTAGTTGCAAAACCATAATTACTTTTGCACCAACGTAATAATTAAAAAACAAACATCCCTCTACCCCCCAACTTCCCAGAACATTTCTTTTGGTATTGCCTGTTTTCATGGATAGATATGTTTGGAGACAAATGTTCAAAAAATCATTCTAACGCCTCAGTAGGTACAGAGAAGTATTTGGTAGGTACTGAAGAGGCACTGTCAGATTGTTGTATAATCATAGTGGATCATAAAAAAATGACACTGCCAACCCCCTATGTATAAAGGGGTTGTACTTTAGAATTTTTGGATCTCAAAATACATTTTCTAATTAAAATGTTTTACATGGCAGTTAGTTTTCCGAGTTAGCCCATAATATTACTTCCTATTTTATCATATTCCTTTATCATTTGAGCCATCTATGGTTATTATAAAAAATATAGACAAGGCACAATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGTTGGAGGATCATTTGAGGCCAGGAGTTTGAGACCAGCCTGGGCAACATAGTGAGTCTGGATCTCTACAAAAAAAAAAAAATTTTAAAGCTAGCCTGGCATGGTGGTATGGACCTGTAGTCCTAGCTACTCAGGTGGCTGAGGTGGAATGATCGCTTGAGCCCAGGAGTTTGAGGCTGCAGTGAGCTATGATCATGCCACTGCATTCCAGCCTAGGTGACATAGTGAGACTCTATCTCTATAAATAAATAAATAAATAAATAAATAAATAAAATAAAATAGAAATATATTATAATCTCCCCAAATTTCATCCCCAGATACAACCATTGTCAACATTTTTGTACCAATATTTTTCTCTATGCATTACCAAAAAGTTGTCATAATTTTAAATTCTTCACAGCGACTAGGTGCTAAAGACTTTAGGTGACCTGACTTTAGGTGACTCCTCTTGTCTGTGTTCTGCTGTCACTGACCCAAGGCAGAGCAATTTTTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11934:HG3_PB_pbsv_18823:HG2_PB_PB10Xdip_18876:HG2_PB_SVrefine2Falcon1plusDovetail_7325:HG3_Ill_SVrefine2DISCOVARDovetail_13433:HG4_PB_SVrefine2PBcRDovetail_9642:HG4_Ill_SVrefine2DISCOVARDovetail_13237:HG3_PB_SVrefine2PBcRDovetail_9407:HG2_PB_SVrefine2PBcRplusDovetail_6792:HG2_PB_SVrefine2PB10Xhap12_13985:HG2_PB_SVrefine2Falcon2Bionano_9462:HG2_Ill_SVrefine2DISCOVARplusDovetail_7852:HG2_10X_SVrefine210Xhap12_13366:HG3_PB_SVrefine2Falcon1Dovetail_11908;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13366:HG2_Ill_SVrefine2DISCOVARplusDovetail_7852:HG2_PB_SVrefine2Falcon2Bionano_9462:HG2_PB_SVrefine2PB10Xhap12_13985:HG2_PB_SVrefine2PBcRplusDovetail_6792:HG3_PB_SVrefine2PBcRDovetail_9407:HG4_Ill_SVrefine2DISCOVARDovetail_13237:HG4_PB_SVrefine2PBcRDovetail_9642;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0489671;ClusterMaxSizeDiff=0.048457;ClusterMaxEditDist=0.154042;PBcalls=10;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=1914;DistBack=61095;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=294;REFWIDENED=21:34205309-34205602;PctSeqSimilarity=0.9886;PctSizeSimilarity=1;PctRecOverlap=0.8736;SizeDiff=0;StartDistance=-242;EndDistance=-242;GTMatch=0;TruScore=95;MatchId=3341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:127:1/1:0:18:0:15:./.:0:1:0:3:1/1:0:28:./.:16:204:.:1882:.
chr21	34529177	HG4_Ill_SVrefine2DISCOVARDovetail_13238	C	CAATTCCTGATAGGTAACTATTTAAGAAAACAGATGCATTGGTATTAGGTGAGAGTTCCCTTACATGGAAAGCATTAAAGCTCTACCAGACACTATTTCATGCCTAGAGACTGGTACAGCATATATATTCATTGAATGTTTGTTGAATGAATAAATGAATGAATGAAATTCCAGCTGCTCTGATGACTCCAAATATAAATAAGACATGCTTCTTGAAATTTAATGTTTTGGGTGGAAAAGATATGGAATAAATAATGGTTGAAGAAACTTGAGCTATTTCATCACCCAGTACAGGCTTTAGATCATGGCAAGGCCTGTTTTTCTTCTGCAGATACAGTGTAAGAAAGGAAAAGAGATGGTGGGGATGGAGGAATAAAAAAAAGAAGGAAAGG	20	PASS	ClusterIDs=HG2_Ill_Spiral_1216:HG3_PB_pbsv_18824:HG4_PB_pbsv_19072:HG4_Ill_Spiral_1448:HG2_PB_assemblyticsPBcR_15716:HG3_PB_SVrefine2PBcRDovetail_9408:HG3_PB_SVrefine2Falcon1Dovetail_11909:HG4_PB_SVrefine2PBcRDovetail_9643:HG4_PB_SVrefine2Falcon1Dovetail_11935:HG4_Ill_manta_4286:HG4_Ill_SVrefine2DISCOVARDovetail_13238:HG4_Ill_MetaSV_3103:HG4_Ill_GATKHCSBGrefine_12862:HG3_Ill_SVrefine2DISCOVARDovetail_13434:HG3_Ill_MetaSV_3152:HG3_Ill_GATKHCSBGrefine_12284:HG2_PB_SVrefine2PBcRplusDovetail_6793:HG2_PB_SVrefine2PB10Xhap12_13986:HG2_PB_SVrefine2Falcon2Bionano_9463:HG2_Ill_manta_5053:HG2_Ill_SVrefine2DISCOVARplusDovetail_7853:HG2_Ill_MetaSV_3001:HG2_Ill_GATKHCSBGrefine_12453:HG2_10X_SVrefine210Xhap12_13367:HG2_PB_SVrefine2Falcon1plusDovetail_7326:HG2_PB_pbsv_19140:HG4_PB_HySA_27470:HG2_PB_HySA_34533:HG2_PB_PB10Xdip_18877:HG2_Ill_breakscan11_4953;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13367:HG2_Ill_GATKHCSBGrefine_12453:HG2_Ill_MetaSV_3001:HG2_Ill_SVrefine2DISCOVARplusDovetail_7853:HG2_Ill_manta_5053:HG2_PB_SVrefine2Falcon2Bionano_9463:HG2_PB_SVrefine2PB10Xhap12_13986:HG2_PB_SVrefine2PBcRplusDovetail_6793:HG3_Ill_GATKHCSBGrefine_12284:HG3_Ill_MetaSV_3152:HG3_Ill_SVrefine2DISCOVARDovetail_13434:HG4_Ill_GATKHCSBGrefine_12862:HG4_Ill_MetaSV_3103:HG4_Ill_SVrefine2DISCOVARDovetail_13238:HG4_Ill_manta_4286:HG4_PB_SVrefine2Falcon1Dovetail_11935:HG4_PB_SVrefine2PBcRDovetail_9643;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0648379;ClusterMaxSizeDiff=0.0574282;ClusterMaxEditDist=0.16078;PBcalls=15;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=391;DistBack=185;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=21:34529178-34529179;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3342.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:65:1/1:1:26:1:34:./.:0:20:2:18:1/1:0:17:./.:3:56:.:.:.
chr21	34846918	HG4_PB_SVrefine2Falcon1Dovetail_11939	C	CTAAAAATACAAAACCAAGCTGGGCGTGGTGGTGGATGCCTGTAATCCCACCTATTCAGGAGGCTGAGGCAGGAGAATCACTTGGACCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGTGCCATTGCACTCCAGCCTGGGCAACAGGAGTGAAACTCCGTCACCAAAAAAAAAAAAAAAAAAAAAAGACAACAATTTAAAGCAAAAATTAGAACACTGTAGAGAATGTCCAAAAAGATAAATTTCTTTCTAAACAGTATGTCAGTTATGTTTTCAAATAATATCATTAAATATGGTTTTAGGTAAAATACCTCTAAATTTAAAGTAGTGAGTCCAATTGTTAATCTGAAAAAAGCACAATAAATATATTACAGAAGGTCCAAACACTGAAAACACAGACTGGGAGACAATATTTACAAAATGATTATCTGGCAAAGGACTTGTCCTTGCATATATAAAGAACTCCTAAACATTAATAATAAAAAGAAAAATATAGGCAATAAAAAGTATATGAGACTCGAACAGACAATTCATGACCAATAAGCACTGAAAAAGATGTTCAACATCATTAGTCAACAGGGAAATGCAAATTAATGAAAGATATCTCACACCTACTATAACAGCTAAACTTAAAAAGATTGACAACGCCAAATGTCAGTGAGGATGTAGAAACAAATAAAATTCTCACAACACGTTTCTGATGGCAGTTTTATAAGGTTAAAAATAAATCTCTCTAAAACTCAGTAATTTCATTCCTAGGTGTTTACCCAAGGGAAGTAAAAACATCAACACATACAAAAAGGTTTGTACAGGAAAGCTTATAGCAGTTTTATTCATAATAGTGCAAAACAGAAACAACCTAAATGTTCATCAATAGAAGATGGTAAAACAAATTATGTCTGTTCACACAATGGAATACTAAGCAATAGAAAAAATATGAACCAATACGTATTTTAATTCTCATATAAAAAATCTCAAAAACATGACTTGAGTAAAAGAAGGCAGATACAGAAGAGTATATACTATATGACTCCATTTAAACGAATTTTAAGAAGAGGTAAAACTAATCAATAGTCACAAAAATCAAAACAGTGGCTACCTACAAGGGGAGAGGACCAACTAGAAGGAACTTTTTGGGTGAATGGAAATATTCAATATCTTGATTGGGATAGTGGTTATGCAAGTAAATACACTTATCAAGTCACTGAAGTGTACACTTAAGATCTGTCTGTACAGATCTTAAAATTTTAAATTTTTTATCATTTAGCTATGCTTTAGTTACACTAAAGTATTATTCTGAATGCAATATGAACACATTTTATCAAGATATTCTACAGACAAGTTAATGAATTATTATAAAAGATTAAGTAGTAACTGGTTAAAAGCAAGTATGGGCCGGGCACGGTGGCTCATGCCTGTAATCCCAGTACTTTGGGGGGCTGAGATGGGTGGATCATGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAGATGGTAAAATCCTGTCTCTACTAAAATACAAAAATCAGCCAGGCGTGGTGGCAGACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGCAGCAGAGGTTGCAATGAACCAAGATCACACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCCAAAAAAAAAAAGCATGGGGAAAGTCACCATGAATTTAAGGCAATGCTTGAAGATTAAAAAAAATTCATTTCCCACATAAAATTCATTTCCCATATATTAATCTATTATAAATTATTATATAAGCAGAAATGAGGTAGGTATTTCCACACACAGATTTATAAAACAAGTCATAATCTCCTCCCAACTAGGGCTTAAATTGGGTCAGAGATGGGGTGGGACAAAGGAACAGGAAAACAAATTTATACAAATAATGACTATGAAGGAAATGCATAGGATCCTAAGAGAATAAAGGGAAGCTTATTTCAGAATGAGTGGTCAGGGAAAGCCTCTTTGAAGAGGTAAAGTTTGCTAAAATTAAAAAAAACCTACTGAAATTTAAAAGCTGAGTAAAGTTAATTAGATTAAATAGAAGTAAAAGGAAGAGCAGAGAGAGGGAAAAATATACACAAAGCCCCTAAATCCCTTAGTACCAGCAAGGAAGAATTAGCTGCTACCTAGGAGAATCAGGATAAAGAAAGAAAGTAAAGGGGCAGGGCTCAGTGGCTCATGTCTGTAATCCTAGCACTTTGGGAGGCCAAGGTGGGCAGATCATTTGAGGTCAGGAGTTCGAGGCCAGCCTGGCCAACATGGTGAAACCCTGGCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGGGCACCTGTAATCCCAGCTACTCAGGAGTCAGATGCAGGAAAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCACACCACTGCATTGCCCAAGCTGGTCCCTAACTTCTGGCCCCAAGTGATTCTTCCATTTCAGCCCCCTAGAGTAGCTGGGATTACAGGTGCAAGCCATGGTGCCCTAACAAATATGTTTAGAAGAGTTGTAGGACACTGTTTGCCAGAAAGAGTCAAGGAAAGATCAATAAATTAAAAGGAAATAAAATATGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCATGGCGGGCAGATCACTTGAGGTCAGGAGTTCAAGACCACCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAACACAAAAATTAGCCGACATGGTGGCACATGCCCGTAGTCCCAGCTACTGAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATTGCGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTGTCTCAAAAAAAAAGAGGATTTCTTCCAAGAGTTGTAATAGGAAATGAAACGTAGCTTTACCAGTACAACCCTGAAGACAAGGCACAAGCAAAGCAATGGCTACCAGACCAAGGCGGAAGAATCACTTGTGGCCAGGAGTGCAAGACCACATCTCTACAAAAAATGTAAAAACTTAGCCAGGTATGGTGGTGCAAACCTGTAGTCCTAGCTACTTGAGGAGAGGCTGAGGTGGTAGGATCACCTGAGCCTAGGCATCTGAGACTGCAGTGAGTTATGACTGCACCACTGTACTCCAGAATGGATGCAGAGCAAGATCCTGTCTCTAAAAAAATTAAAAATAAATAAATTATTAAAAATAAAGCAATGGCTACCAAGAGGTAGAAGTGGTCTAGTCAAAGCAAAAGCAGATTGGTCTGGCAAGGCAAAATGGCTCATGCCTATTATCCCAACACTTTGGGAGGCCAAAGTAAAATGATCGCTTGAGGCAAGGAGTTTGAGACCAGCCTGGGCAAAACAGGCAGACCTTGTCTCTACAAAGAAAAAAATATATATAATAAAATGAAATGAAAATTAAAGCGGACTGGTCAAGAGGAAAGGTCATGCATGGCAACAGTTTTTTTTTAATGCTCCAGGCATTTTGCTGGTTGACTTTCCACCGGACCAAAAAACAATAACATCTGTTTACTATGAGAGTATTTTGAGAAAGCCAAAGCTTTAGCAGAAAAACACCCCGGAAAGCTTCGCCAAAGAGTCCTCTACCACAAACAACAACGCTCCTGGCTCATTTCTCTCATCAAACAAAGGCAATTTTACAAGAGTTCCGATGGGAAATCATTAGGCATCCACCCTAACAGTCCTGATCTGGCTCCTCTGACTTCTTTTTGTTTCCTAATCTTCAAACATCTTTAAAAGGCACCCATTTTTCTTCAGTTAATAATGTAACAAAGACTGCACTGACATGGTTAAACTCCCAGGACCCTCAGTTCTTTAGGGATGGGCTAAATGGCTGCTATCACTGCTTACAAAAGTGTCTTGAACTTGATGGAGCTTACACTGAGAAACACAGTTTATATTTTTTACTTGTGCTTTTTAATTCCATTTTTACACAGACTTTCTGAAGTCCCCTGATATATTTTCAAAATAACTAGAAAAGAGGACTTGAAATGTTCAAAACACACAGAAATGATAAATACTTGAGGTGATGGAGACTCTAAATACCCTATTTATTACACGTGCTATGCACATAACAAAATATCTTATGTACCCATAACTATATACAAATATTATGTATTAATCATAAAAAAGAAACATTGAGAGACTGAAAAATACCCTTTGGAATTTAAAAACATGATGGTAGAAACTTTCTTAAATTCCAAATAGAAGGGTTGGGGAATAAAAGTTAAGAAAATAGAGGCCGCTGGCCCGGCGCGGGCCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCATGAAGTCAGGAGATAGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCATGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTGCAGCTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAGAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAATAGAGGCCAGCTGCGATGGCTCACTCCCGTAATCCCAGAACTTTAAGAGGCAGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCGAAACCAGCCTGGCCAACATGGTGAAACCCCGTCTCCACTAAAAAGTACAAAAATTAGCTGCGAGTGGTGGCAGGCAACTGTCATCCCAGCTACTCAGGAGGCTGAGGCTGGAGAATCACTTGAACCCGGGAGACAGAGGTTGCAGTGAGCTGAGATCGCGCCGCTTCACTCCAGCCTGGGTGACAACAGCGAGACTCCATCTCAAAAAAAAACAAAAAAAAAAAAAAGAAAGAAAATAAAAGAAAAGAAAATAGAGCAACGCTCAGCATAGTGGCTCCTGTCTATAATGCCAGTACTTTGAGAAGCTTTTAAGCAGGAGGAGGCTTTGAGGTCAGGAGTTCTGAGACCAGTCTGGGGAACACAGTGAGACTTTGTTTCTATAAAAACTTAAAATAAATAAATAAATAAATAAATAAATATTGCCCAGGCATGGTGACATATGCCTCTAGTCCCAGCTACTTGGGAGGCTGAGGCTGAAGGATCACTTAAGCCTAAAAGGTCAAGGTTGCAGTGAGCCATGATCATGCCACTGCACTCCAGCCTGGGTGAGAGAGCAAGACCCTGTCTCAAAAATAAAAAAAAAAAGAAAAGGAAAAGAAAATACAAAAATAGAGCAAAAAAATAGATAGAAAACAGATAAGAAATTAGAAGACCAGGGCCAGGCACAGTGGCTCACGCCTGTAATCCCAGGACTTTGGGAGGCCCAGGCAGGCAGATCACCTGAGGTCAGGAGTTAGAGACCAGCCTGATCAACATAGAGAAACTCCATCTCTACTAAAAATACAAAGTTAGCCGTGAGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCTCACCACTGCACTCCACCCTGGGCGATACAGCGAGACTCTGTCTCCAAGAAAAGAAAGAAAGAAGTTAAAAGACCAGTATAAAAGATTCACATATAAATAACAGGTATTTCAGAAAGGAACTACACAGGAAATAGAAGAGAAAAAAGAATCAACAAAATATTTCAAGAAAATTTCCCCAGAATAGAAGTTCTTGTATTTCCGGATTTAAAGTACCCATTGAATATTTAACTAATGGAGTAAAAAAAGACCCACACTTCATTTTAAATTTCAAAACACTGAGGTCAAAGTGTAGATTCTATAAGTTTGCAGAGAGGAAAAAACCAGGTCACATACAAAGGAGCAGGAATTATAATAGCTTTTGGAATTTGTGTGTGTATGTGCGTGAGAGAGAGAGAGACAGGGTCTCGCTCTGTCACCCAGGCTGGAGTACAGTGGCATGATCACAGCTTATTGCAGCCTCTACCTGCTAGGCTCAAGTGATCCTCCCACCTCAGCCCCAGGGAAAAGCTGGGACTATAAGCACACACTACCACGACCAGCTAATTTTTTTATAGAGATGGGATTTTGCCACATTGCCCAGGCTGGTCTTGAACTTCTGGACATAAGCAATCCACCCACTGCAGCCTCCAAAGTGCTGGGATTACAGGCGTGAGACACCACACCGGCCCTCAGCTTGGAATTCTTAACAGTAAAACTACAAGCAAGATGACAATGGGAGTAAGTTCAAAACTCTGTAGGAAAATTATTTCCAACTAAAAGATTTTTACCAGCCAAAATATCAATCAAGTATGAGGATAGCACCAAAACATATTCAGAAGCATTTTGAGAGGCCAAGGCAGGTGGATCACTTGAAGCCAGGAGTTCAAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTATTTAAACAACAACAAAAAAATATTCAGACACGCAAGGTCTCCAAAATAACTCTTCTTCTAAAAATGTAACTCTTCTTGTCAAGAAGCTACTGGAGTTTGAGCTTCACCAGGGAGAGTAAATTAATAAAAGAGAATACAGGATACAGGAAAGATCCTGCACAGAAGAGCTAAAAAGAATCCAGCTGTGCCCCAGAAGCAGCAGATAATCAGGCCAGACTGAAGCAGTGTAACTCAGGACATAATGTCCTGGCTGCTATAGCAGTTTTTTGTGGGGGATTTTGTGCCTTTATACAAAACAATCTTTTAATAAATCCACTGGAATATAGCAGCTTTTGAAGCTGACTCAGGAGCCAGATCTGTACTCAGTGGGGCTTGGCTTGATCTTGAGCACATGCTGATGCAGTTCCTGCTCTCCTTGCAAGGCGTGCAGCCTTCGTCAGCAGAGGACACTCACTTCCCCCTCAGAGAGGTTCTGCTTTCACCTACCCTGTTAACTACAGGTAGGCCATGGTGAGCTAAGAAGCAGAAAATGCAGAGAAGCCCACTCCTTCTGACCTTATTTTTGTTGTCTTTCCATTACTTGGTCCACTAGAACCTTCCAGATACCCTGACTGAGGTGACTCCCCTTTCCTAGGACTCATAACACAGCCCACAAACTTCCTCAGAAAGGCCCCCTGTAAACGGGCAAGGGATCTGAAGCCATTCTGTTCAGCTCATCTTTTCCTAAAAACCTTCATCTAAGTGGCTGTCCTTTCCTTAGTGAAGTTTGACGTTATAATTATAAAATGAGGCCGGGCATGGTGGCTCATGCCTGTTATCCCAACTTTGGGAGGCCAAGGCAGGTGGATCATGAGGTCAGGATTTCGAGACCAGCCTGGCCAACATAGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGCTACTCAGGAGGCTGAGGAAGGAGAATTGCTTGAATCTGGGAGGCAGAGGTTGCGGTGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAGAAAAATAAATAAAATGAAATTTCAATCCCAAATTTAGAAAGTTCTAGCACTGGCTGGGTGCGGTGGTTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGACAGATTACTTGAGGTCAGGAGTTCAAGACCAGCCCGGCCAACATGGTGAAACCCCATTTCTACTAATAATACAAAAATTAGCCTGGCGTGGTGGCGCACGCCTGAAACCTTAGCTACTCGGGAGACTGAAGCAGGAGAATCACTTGAACCTGGAAGGCAGAGGTTGCAGTGAGCCAAGATGGCACCACTGCACTCCAGCTGGGCAACAGAGGGAGACTCCATCTCAAAAAAAAAAAAGAAAGCTCGGGCTGGGCGCGATGGCTCATGCCTGTAATCCCAGCACTTTGGAGGCCGAGATGGACGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATAGCCGGGTGTGATGGCGGGCGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGAGAACCTGGGAGGCAGAGCTTGCAGTGAGTGGAGATCTCGCCACTGCACTCCAGGCTGGGTGACAGAGCCAGACTCCGTCTCAAAAAAAAAAAGAAAGCTCTAGCATTTTCTAATAAGTATGTCTGGACTTCATCTACACTCTCAGGGACAGAACTTTGTTATTACCGTTTATTTAATGAACAGCCCACTATTAATAAAGATGCAGACAGTTTATAGCCCTCTGAGGTTTAACTGTAGAAATTAATGAGGTGTTTTGATTTTATAGCCTGGTAAGAAAATCAATCCCAAAGATATTATGATTTTGTTGCCCTGTGGAACATTAACCAATCAAACTAACTTAGCCACAATACTGAGACATTTCTTTCCCTACAAATTACATAAATATCAATTCCTTATATCCTCTTAAAACCAGCTTCTTTGGCCAGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCACCTAAGGTCAGGAGTTCGAGACCAGCCTGTGCTGGCCAGGCTGGTGAAACCCGTCTCTACTTAAAATACAAAAATTAGCCGGGCATGGTGGCAGGCGCCTTTAATCCTAGCTACTCAGGAGTCTGAGGCAGAACTGCTTGAGCCCGGGAAGAGGAGGTTGCAGTGAGCTGAGACCATGCCACTGTACCCCGGCCTGGGCAACAGAGCCAGACTCCATCTCAAAACAAAACAAAAACACAGCTCTTTGAGGTACTCTCAATAATAGTAAAACAAAACTGAAACACGCTCCCTATCTATCTGCATGAGAATTGTGTTTGTAACACCATTCATTCAAAACTAAGGTGGCTCACCACTGTAATCCCAGCACTTTGTGAGGCCAAGGTGGGTGGATCACCTGAGGTCAGGAATTCAAGACCAGCCTGGCCAACCTGGAGAAACCCCATCCTTACTAAAAATAAAAAACTAGCCGGGCATAATGGCGGTCACCTGTAATCCTAGCTACTTGGGAGGCTGAGACAGGAGAACCACTTGAACCCAGAAGGCAGAGGCAGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGTAACAGAGCAAGACTCTGTCTCCAAAAAAAAAAAAAAAAAAAACCCACTAAGTATACTGTTTAGGATATAGGAGTGTGTGTGCAAATTTATGTATATATTTGTAAACATGCACATACGTATAAATGTATATGTATGTGAATTTATGTATACATGCATAAAGCTTATTTTAAAAAGCAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGCCAAGGCAGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCTGTCTCTACTAAAAAAATAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9467:HG2_PB_pbsv_19143:HG2_PB_HySA_34539:HG2_PB_PB10Xdip_18901:HG4_PB_SVrefine2Falcon1Dovetail_11939:HG2_PB_assemblyticsPBcR_15720:HG4_Ill_SVrefine2DISCOVARDovetail_13242:HG2_Ill_SVrefine2DISCOVARplusDovetail_7855:HG2_10X_SVrefine210Xhap12_13369:HG4_PB_SVrefine2PBcRDovetail_9645:HG2_PB_SVrefine2PBcRplusDovetail_6796:HG2_PB_SVrefine2PB10Xhap12_13989:HG2_PB_SVrefine2Falcon1plusDovetail_7328:HG3_PB_SVrefine2Falcon1Dovetail_11913:HG3_PB_SVrefine2PBcRDovetail_9409:HG3_Ill_SVrefine2DISCOVARDovetail_13438;NumClusterSVs=16;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_11939;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0860124;ClusterMaxSizeDiff=0.0860124;ClusterMaxEditDist=0.148414;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=9492;DistBack=72627;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=185;REFWIDENED=21:34846919-34847103;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9938;PctRecOverlap=0.9798;SizeDiff=-59;StartDistance=-164;EndDistance=-164;GTMatch=0;TruScore=98;MatchId=3344.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:81:1/1:0:21:0:12:./.:3:6:0:6:0/1:2:6:1/1:1:801:.:9494:.
chr21	35383708	HG2_PB_SVrefine2PB10Xhap12_13991	T	TTAATTTTTGTATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCTTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_HySA_34547:HG2_PB_HySA_34548:HG4_PB_HySA_27481:HG3_PB_pbsv_18830:HG4_PB_pbsv_19076:HG4_PB_SVrefine2Falcon1Dovetail_11941:HG3_PB_SVrefine2Falcon1Dovetail_11915:HG2_PB_assemblyticsPBcR_15726:HG2_PB_PB10Xdip_18902:HG2_PB_pbsv_19146:HG4_PB_SVrefine2PBcRDovetail_9647:HG4_Ill_SVrefine2DISCOVARDovetail_13245:HG4_Ill_MetaSV_3104:HG2_PB_SVrefine2PBcRplusDovetail_6798:HG2_PB_SVrefine2PB10Xhap12_13991:HG2_10X_SVrefine210Xhap12_13372:HG4_Ill_GATKHCSBGrefine_12867:HG3_Ill_manta_4111:HG3_Ill_MetaSV_3154:HG3_Ill_GATKHCSBGrefine_12288:HG2_PB_SVrefine2Falcon1plusDovetail_7329:HG2_Ill_MetaSV_3002:HG2_PB_SVrefine2Falcon2Bionano_9468;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13372:HG2_PB_SVrefine2PB10Xhap12_13991:HG2_PB_SVrefine2PBcRplusDovetail_6798:HG4_Ill_MetaSV_3104:HG4_Ill_SVrefine2DISCOVARDovetail_13245;NumExactMatchSVs=5;ClusterMaxShiftDist=0.131833;ClusterMaxSizeDiff=0.131833;ClusterMaxEditDist=0.285251;PBcalls=15;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=313;DistBack=26017;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=21:35383709-35383724;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:61:1/1:4:24:1:26:./.:0:2:0:2:1/1:0:34:1/1:2:55:.:.:.
chr21	35601522	HG4_Ill_scalpel_17178	G	GAGAAAGAAAGGAAAGAAGGAAGGGAGGAAGGAAGGAAGAGAGGGAGGGAGGGAGGA	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24863:HG4_Ill_svaba_23205:HG4_Ill_scalpel_17178:HG2_Ill_svaba_23284:HG2_Ill_Krunchall_25185;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24863:HG4_Ill_svaba_23205:HG4_Ill_scalpel_17178:HG2_Ill_svaba_23284:HG2_Ill_Krunchall_25185;NumExactMatchSVs=5;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=56;DistBack=19;DistForward=77287;DistMin=19;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=21:35601521-35601525;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3347.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:43:14:0|1:33:2:2:12:./.:3:24:16:1:0/1:23:15:./.:.:.:.:.:.
chr21	35778363	HG2_PB_SVrefine2PBcRplusDovetail_6799	A	ACACAGAGAACAAACCCACAGACAACAAACCCAGAGGCAACTAACCCACAGACAACAAACCCACAGAGAACAAACCCACAGAGAACAAACCCACAGACAACAAACCCACAGACAACAAGCCCACAGACAACAAGCCCGCAGAAAACAAACCCACAGAAAACAAACCCACAGACAACAAACCCACAGAAAACAAACCCGCAGAGAACAGACCCAGAGACAACAAACTCACAGACAACAAACCACAGAGAACAAACCCACAGAGAACAAACCCACAGACAACAAACCCACAGACAACAAACCCACAGAGAACAAACTCACAGAGAACAAACCCACAGACTACAAACCCACAGAGAACAAACCCGCAGACAACAAACCCAAAGAGAACAAACCCACAGACAACAAACCACAGACAACAAATCCGCAGAAAACAAACCCGCAGACAACAAACCCACAGAGAACAAACC	20	PASS	ClusterIDs=HG3_PB_pbsv_18832:HG4_PB_HySA_27484:HG4_PB_pbsv_19079:HG3_PB_HySA_28510:HG2_PB_pbsv_19148:HG4_Ill_GATKHCSBGrefine_12869:HG3_Ill_GATKHCSBGrefine_12291:HG2_PB_HySA_34550:HG2_Ill_breakscan11_4954:HG2_PB_PB10Xdip_18903:HG2_10X_SVrefine210Xhap12_13375:HG3_PB_SVrefine2Falcon1Dovetail_11916:HG3_PB_SVrefine2PBcRDovetail_9410:HG4_PB_SVrefine2PBcRDovetail_9648:HG2_PB_SVrefine2PBcRplusDovetail_6799:HG2_PB_SVrefine2PB10Xhap12_13992:HG2_PB_SVrefine2Falcon2Bionano_9469:HG2_PB_SVrefine2Falcon1plusDovetail_7330:HG4_PB_SVrefine2Falcon1Dovetail_11942;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13992:HG2_PB_SVrefine2PBcRplusDovetail_6799:HG4_PB_SVrefine2PBcRDovetail_9648;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0690377;ClusterMaxSizeDiff=0.0668058;ClusterMaxEditDist=0.246888;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=463;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=152;REFWIDENED=21:35778364-35778515;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.9957;PctRecOverlap=0.9828;SizeDiff=-2;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=99;MatchId=3348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:118:1/1:0:42:0:34:1/1:1:95:0:80:1/1:0:23:1/1:2:58:.:.:.
chr21	36011346	HG2_Ill_svaba_23292	T	TTGTTTTTGTGTTTTTGCAAATCCCAGGAGCTGGTGGATGGGGATGGTGTGACCC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13377:HG2_PB_pbsv_19149:HG3_PB_SVrefine2PBcRDovetail_9412:HG3_PB_HySA_28512:HG2_PB_HySA_34551:HG3_Ill_svaba_23519:HG3_PB_pbsv_18834:HG3_Ill_Krunchall_24726:HG3_Ill_GATKHC_29824:HG3_Ill_GATKHCSBGrefine_12292:HG3_Ill_250bpfermikitraw_24169:HG3_Ill_150bpfermikitraw_23458:HG2_Ill_svaba_23292:HG2_Ill_SVrefine2DISCOVARplusDovetail_7860:HG2_Ill_Krunchall_25192:HG2_Ill_GATKHC_29918:HG2_Ill_GATKHCSBGrefine_12460:HG2_Ill_250bpfermikitraw_24871:HG2_Ill_150bpfermikitraw_23404;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13377:HG3_Ill_svaba_23519:HG3_Ill_Krunchall_24726:HG3_Ill_GATKHC_29824:HG3_Ill_GATKHCSBGrefine_12292:HG3_Ill_250bpfermikitraw_24169:HG3_Ill_150bpfermikitraw_23458:HG2_Ill_svaba_23292:HG2_Ill_SVrefine2DISCOVARplusDovetail_7860:HG2_Ill_Krunchall_25192:HG2_Ill_GATKHC_29918:HG2_Ill_GATKHCSBGrefine_12460:HG2_Ill_250bpfermikitraw_24871:HG2_Ill_150bpfermikitraw_23404;NumExactMatchSVs=14;ClusterMaxShiftDist=0.126126;ClusterMaxSizeDiff=0.107143;ClusterMaxEditDist=0.34188;PBcalls=5;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=54;DistBack=35662;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=58;REFWIDENED=21:36011347-36011404;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3349.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:20:./.:7:14:18:0:0|1:10:0:1:11:0/1:16:25:./.:.:.:.:.:.
chr21	36899247	HG2_PB_SVrefine2Falcon1plusDovetail_7332	AC	GTAATATATATATTATATATATAATATATATATGTAATATATATATTACATATATATAATATATATGTAATATATATTATATATATTATATATATAATATATATGAATATATATATATATAATATATTATATATTATATATATATATATTATACATTATATATATAATATATATTATATATATATACACACACACACACACACACACACTGGGGGTGGGTGTGTGTATGTGTGTGTATATGTTTTAAAGTTTTGCTACAACTGGACTACAGTCCAGAGGGGAGATATATAGATATAGATATATATAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11919:HG2_PB_assemblyticsfalcon_16228:HG2_PB_SVrefine2Falcon1plusDovetail_7332:HG4_PB_pbsv_19085:HG3_PB_SVrefine2PBcRDovetail_9415:HG3_PB_pbsv_18839:HG3_Ill_MetaSV_3155:HG4_PB_HySA_27491:HG2_PB_pbsv_19153:HG3_PB_HySA_28519:HG4_Ill_MetaSV_3107:HG2_Ill_MetaSV_3003:HG2_PB_SVrefine2Falcon2Bionano_9473:HG4_PB_SVrefine2Falcon1Dovetail_11946:HG4_PB_SVrefine2PBcRDovetail_9651:HG2_Ill_SVrefine2DISCOVARplusDovetail_7863:HG4_Ill_SVrefine2DISCOVARDovetail_13250;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7332:HG2_PB_assemblyticsfalcon_16228;NumExactMatchSVs=2;ClusterMaxShiftDist=0.190184;ClusterMaxSizeDiff=0.190184;ClusterMaxEditDist=0.375385;PBcalls=12;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=305;DistBack=120;DistForward=85896;DistMin=120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=199;REFWIDENED=21:36899048-36899246;PctSeqSimilarity=0.9784;PctSizeSimilarity=0.9776;PctRecOverlap=0.5719;SizeDiff=-7;StartDistance=130;EndDistance=131;GTMatch=0;TruScore=84;MatchId=3350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:41:1|0:0:29:36:1:./.:1:20:5:24:1/1:0:22:./.:5:56:.:.:.
chr21	39050073	HG2_Ill_250bpfermikitraw_24903	T	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACCCACCCACCCACCCATCCATCCACCCACCCAC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4957:HG4_PB_pbsv_19094:HG3_PB_HySA_28538:HG3_PB_pbsv_18849:HG4_PB_HySA_27510:HG2_PB_pbsv_19162:HG2_PB_PB10Xdip_18917:HG4_Ill_Krunchall_25561:HG4_Ill_GATKHC_29913:HG4_Ill_GATKHCSBGrefine_12889:HG4_Ill_250bpfermikitraw_24534:HG4_Ill_150bpfermikitraw_23602:HG3_Ill_GATKHC_29863:HG3_Ill_GATKHCSBGrefine_12308:HG3_Ill_250bpfermikitraw_24198:HG2_Ill_GATKHC_29951:HG2_Ill_250bpfermikitraw_24903:HG2_PB_HySA_34581:HG2_PB_assemblyticsfalcon_16244:HG4_PB_assemblyticsfalcon_15940:HG2_PB_assemblyticsPBcR_15754;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24903:HG2_Ill_GATKHC_29951:HG3_Ill_250bpfermikitraw_24198:HG3_Ill_GATKHCSBGrefine_12308:HG3_Ill_GATKHC_29863:HG4_Ill_150bpfermikitraw_23602:HG4_Ill_250bpfermikitraw_24534:HG4_Ill_GATKHCSBGrefine_12889:HG4_Ill_GATKHC_29913:HG4_Ill_Krunchall_25561;NumExactMatchSVs=10;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.0662252;ClusterMaxEditDist=0.25974;PBcalls=10;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=0;DistForward=40;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=125;REFWIDENED=21:39049992-39050116;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3351.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:62:./.:2:4:0:7:1/1:1:24:1:38:1/1:0:21:./.:.:.:.:.:.
chr21	39057820	HG3_PB_SVrefine2Falcon1Dovetail_11928	T	TAAAAATACAAAAAATTAGGCCGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_pbsv_19163:HG2_PB_SVrefine2PBcRplusDovetail_6809:HG2_PB_assemblyticsfalcon_16245:HG2_PB_SVrefine2Falcon1plusDovetail_7338:HG4_PB_pbsv_19095:HG3_PB_pbsv_18850:HG2_PB_PB10Xdip_18918:HG4_PB_HySA_27511:HG3_PB_HySA_28539:HG2_PB_HySA_34582:HG3_PB_SVrefine2PBcRDovetail_9421:HG4_PB_SVrefine2PBcRDovetail_9658:HG3_PB_SVrefine2Falcon1Dovetail_11928:HG2_PB_SVrefine2Falcon2Bionano_9478:HG2_PB_SVrefine2PB10Xhap12_14005:HG4_PB_SVrefine2Falcon1Dovetail_11952;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9478:HG3_PB_SVrefine2Falcon1Dovetail_11928:HG4_PB_SVrefine2PBcRDovetail_9658;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0755906;ClusterMaxSizeDiff=0.0724409;ClusterMaxEditDist=0.274016;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=317;DistBack=3728;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=50;REFWIDENED=21:39057821-39057870;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9968;PctRecOverlap=0.9338;SizeDiff=1;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=97;MatchId=3352.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:1:17:0:17:./.:0:3:0:6:1/1:0:14:1/1:2:51:.:.:.
chr21	39080013	HG2_10X_SVrefine210Xhap12_13391	T	TAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGCATGTGTATTCATGTGTGTGTATATTTGTGTGTGCATGTGTATGCACGTGCGTGCATGTATGTGTGTGTATACACGTATATGTATTTGTGTGTGCATGTGTATGCATGTGTGTGCATGTATGGGCATGTGTGTATACCTGTGTGTATGTGTATTTGTGTTGCATGTGTGTATATGTGTGTGTATTTACATGTGCATGTGTATACCTGTGTGTACGTGTATTTGTGCGTGTGTATTTACATGTGCACGTGTATGCATGTGTGTATGTGTATGCATGTGTGTATGTGTGTGCATATGTGTATGCATGTGTGTATGTGTGCATGTGTATATATGTGTCTATGTACTTGTGTGTATGTGTATGCATGTGTGTGTACATGTATGTATACGTGTGTATTTGTGTGTGCATGTGTATGCACGTGTGTGTATGTGTGTAGGAGTGTGTGTGTGTGGGG	20	PASS	ClusterIDs=HG4_PB_pbsv_19097:HG4_PB_HySA_27513:HG2_PB_pbsv_19164:HG2_PB_SVrefine2Falcon1plusDovetail_7339:HG4_PB_assemblyticsfalcon_15942:HG4_PB_SVrefine2Falcon1Dovetail_11953:HG3_PB_pbsv_18851:HG2_PB_SVrefine2PB10Xhap12_14006:HG2_Ill_GATKHCSBGrefine_12474:HG2_PB_SVrefine2Falcon2Bionano_9479:HG2_PB_SVrefine2PBcRplusDovetail_6810:HG2_Ill_MetaSV_3007:HG4_Ill_SVrefine2DISCOVARDovetail_13266:HG4_Ill_MetaSV_3113:HG2_Ill_SVrefine2DISCOVARplusDovetail_7874:HG2_10X_SVrefine210Xhap12_13391:HG4_PB_SVrefine2PBcRDovetail_9659:HG3_PB_SVrefine2Falcon1Dovetail_11929:HG3_Ill_MetaSV_3158:HG3_Ill_GATKHCSBGrefine_12309:HG3_Ill_SVrefine2DISCOVARDovetail_13458:HG3_PB_SVrefine2PBcRDovetail_9422:HG4_PB_HySA_27512:HG2_PB_PB10Xdip_18919:HG2_Ill_breakscan11_4958;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13391:HG2_Ill_SVrefine2DISCOVARplusDovetail_7874:HG4_Ill_MetaSV_3113:HG4_Ill_SVrefine2DISCOVARDovetail_13266;NumExactMatchSVs=4;ClusterMaxShiftDist=0.145046;ClusterMaxSizeDiff=0.145046;ClusterMaxEditDist=0.259481;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=488;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=24;REFWIDENED=21:39080014-39080037;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3353.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:82:1/1:0:42:0:16:1/1:0:24:0:31:1/1:0:26:1/1:2:201:.:.:.
chr21	39196249	HG3_Ill_250bpfermikitraw_24200	C	CTAGATCTACACGATCAGATCTACTACAATTAGACCCAGCGCAAATCTACGACAATTGCTACATCTTTACTTGAAAATTGCTAGAAAG	20	PASS	ClusterIDs=HG3_PB_HySA_28543:HG4_PB_assemblyticsfalcon_15945:HG2_PB_assemblyticsfalcon_16248:HG2_PB_assemblyticsPBcR_15759:HG2_PB_PB10Xdip_18924:HG2_PB_pbsv_19170:HG3_PB_pbsv_18855:HG2_Ill_breakscan11_4959:HG2_PB_HySA_34590:HG4_PB_SVrefine2PBcRDovetail_9662:HG4_PB_SVrefine2Falcon1Dovetail_11956:HG4_Ill_manta_4291:HG4_Ill_SVrefine2DISCOVARDovetail_13267:HG4_Ill_Krunchall_25563:HG4_Ill_GATKHCSBGrefine_12890:HG4_Ill_250bpfermikitraw_24536:HG4_Ill_150bpfermikitraw_23605:HG3_Ill_manta_4115:HG3_Ill_Spiral_19199:HG3_Ill_Krunchall_24758:HG3_Ill_GATKHCSBGrefine_12310:HG3_Ill_250bpfermikitraw_24200:HG2_PB_SVrefine2PBcRplusDovetail_6813:HG2_PB_SVrefine2PB10Xhap12_14009:HG2_PB_SVrefine2Falcon2Bionano_9482:HG2_PB_SVrefine2Falcon1plusDovetail_7342:HG2_Ill_manta_5061:HG2_Ill_SpiralSDKrefine_10230:HG2_Ill_SVrefine2DISCOVARplusDovetail_7875:HG2_Ill_Krunchall_25224:HG2_Ill_GATKHCSBGrefine_12476:HG2_Ill_250bpfermikitraw_24905:HG2_Ill_150bpfermikitraw_23434:HG2_10X_SVrefine210Xhap12_13393;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13393:HG2_Ill_150bpfermikitraw_23434:HG2_Ill_250bpfermikitraw_24905:HG2_Ill_GATKHCSBGrefine_12476:HG2_Ill_Krunchall_25224:HG2_Ill_SVrefine2DISCOVARplusDovetail_7875:HG2_Ill_SpiralSDKrefine_10230:HG2_Ill_manta_5061:HG2_PB_SVrefine2Falcon1plusDovetail_7342:HG2_PB_SVrefine2Falcon2Bionano_9482:HG2_PB_SVrefine2PB10Xhap12_14009:HG2_PB_SVrefine2PBcRplusDovetail_6813:HG3_Ill_250bpfermikitraw_24200:HG3_Ill_GATKHCSBGrefine_12310:HG3_Ill_Krunchall_24758:HG3_Ill_Spiral_19199:HG3_Ill_manta_4115:HG4_Ill_150bpfermikitraw_23605:HG4_Ill_250bpfermikitraw_24536:HG4_Ill_GATKHCSBGrefine_12890:HG4_Ill_Krunchall_25563:HG4_Ill_SVrefine2DISCOVARDovetail_13267:HG4_Ill_manta_4291:HG4_PB_SVrefine2Falcon1Dovetail_11956:HG4_PB_SVrefine2PBcRDovetail_9662;NumExactMatchSVs=25;ClusterMaxShiftDist=0.187135;ClusterMaxSizeDiff=0.187135;ClusterMaxEditDist=0.25;PBcalls=14;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=87;DistBack=4;DistForward=5;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=7;REFWIDENED=21:39196250-39196256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3354.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:84:1/1:2:23:1:46:1/1:0:33:1:31:1/1:0:46:./.:.:.:.:.:.
chr21	39579659	HG2_PB_assemblyticsPBcR_15764	T	TCCTCTCTCCTCTCCCCTCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCTCCTCTCCCCTCCCCTTTCCTCTACCC	10	PASS	ClusterIDs=HG4_PB_pbsv_19105:HG4_PB_HySA_27527:HG2_PB_pbsv_19173:HG2_PB_HySA_34600:HG3_PB_HySA_28547:HG2_PB_PB10Xdip_18927:HG2_PB_assemblyticsfalcon_16251:HG4_PB_assemblyticsfalcon_15950:HG2_PB_assemblyticsPBcR_15764;NumClusterSVs=9;ExactMatchIDs=HG2_PB_assemblyticsPBcR_15764:HG4_PB_assemblyticsfalcon_15950;NumExactMatchSVs=2;ClusterMaxShiftDist=0.298851;ClusterMaxSizeDiff=0.298851;ClusterMaxEditDist=0.333333;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=75;DistBack=-1;DistForward=10866;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=21:39579658-39579661;PctSeqSimilarity=0.9471;PctSizeSimilarity=0.9036;PctRecOverlap=0.8916;SizeDiff=-8;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=91;MatchId=3355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:34:1/1:2:16:0:15:./.:0:13:2:14:./.:0:5:./.:.:.:.:.:.
chr21	39879904	HG2_PB_SVrefine2PB10Xhap12_14013	C	CACACAGACACACACACATGCACACACACAGAGACACACAAACACACATGCACACACACAGACACACACACGCACATGCACACACACAGACACACACACGCACATGCACACACACAGACACACAGACACACACACATGCACATACACAGACGCACATAGACACATGCACAGAAGCACACAGACACATATACAGACACACACAGCATGCACACAGACCCACATACACATACACACAGACACACACATACACCCACACATGTGAAAACACACACACAAAGACACATACATACACACAGGTGCAAAGACAAACACACAGACACACATAAACACACATATATATACACAGATACACACACTGACACACACAAACATGCCCACAGACACATACACAGACACAAAGACAGACACACATACACATAGATGTATGCACACAGACACACAGAAGCACACAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7346:HG4_PB_pbsv_19107:HG2_PB_pbsv_19175:HG4_Ill_manta_4295:HG4_Ill_MetaSV_3119:HG4_Ill_GATKHCSBGrefine_12894:HG3_Ill_MetaSV_3162:HG3_Ill_GATKHCSBGrefine_12313:HG2_Ill_manta_5064:HG2_Ill_MetaSV_3011:HG2_Ill_GATKHCSBGrefine_12479:HG4_PB_HySA_27530:HG2_PB_PB10Xdip_18928:HG2_Ill_breakscan11_4961:HG3_PB_pbsv_18860:HG4_Ill_SVrefine2DISCOVARDovetail_13274:HG3_PB_SVrefine2Falcon1Dovetail_11936:HG4_PB_SVrefine2PBcRDovetail_9666:HG4_PB_SVrefine2Falcon1Dovetail_11960:HG3_PB_SVrefine2PBcRDovetail_9428:HG3_Ill_SVrefine2DISCOVARDovetail_13464:HG2_PB_SVrefine2PBcRplusDovetail_6817:HG2_PB_SVrefine2PB10Xhap12_14013:HG2_PB_SVrefine2Falcon2Bionano_9486:HG2_Ill_SVrefine2DISCOVARplusDovetail_7881:HG2_10X_SVrefine210Xhap12_13397;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13397:HG2_Ill_SVrefine2DISCOVARplusDovetail_7881:HG2_PB_SVrefine2Falcon2Bionano_9486:HG2_PB_SVrefine2PB10Xhap12_14013:HG2_PB_SVrefine2PBcRplusDovetail_6817:HG3_Ill_SVrefine2DISCOVARDovetail_13464:HG3_PB_SVrefine2PBcRDovetail_9428:HG4_PB_SVrefine2Falcon1Dovetail_11960:HG4_PB_SVrefine2PBcRDovetail_9666;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0667384;ClusterMaxSizeDiff=0.0624327;ClusterMaxEditDist=0.178384;PBcalls=13;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=451;DistBack=34176;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=129;REFWIDENED=21:39879905-39880033;PctSeqSimilarity=0.991;PctSizeSimilarity=1;PctRecOverlap=0.8914;SizeDiff=0;StartDistance=-49;EndDistance=-49;GTMatch=0;TruScore=96;MatchId=3356.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:0:15:2:6:1/1:1:24:2:47:1/1:0:14:1/1:2:104:.:.:.
chr21	41091358	HG2_Ill_250bpfermikitraw_24927	G	GGTGCCTGTGTTGTAAATCATGTTCTGGAGGTGACCTCATTTCCTTGGAGGCTTCCTCTGGGTCAGGTCAGGCATATGATGAATCACTAGGCT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24927:HG3_PB_HySA_28566:HG2_PB_PB10Xdip_18933:HG2_PB_assemblyticsfalcon_16272:HG2_PB_SVrefine2Falcon1plusDovetail_7350:HG2_10X_SVrefine210Xhap12_13402:HG2_PB_HySA_34620:HG3_Ill_GATKHC_29892:HG3_Ill_GATKHCSBGrefine_12316:HG2_Ill_GATKHCSBGrefine_12482:HG3_PB_pbsv_18868:HG3_Ill_250bpfermikitraw_24221:HG2_Ill_Krunchall_25246;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24927:HG3_Ill_250bpfermikitraw_24221:HG2_Ill_Krunchall_25246;NumExactMatchSVs=3;ClusterMaxShiftDist=0.140541;ClusterMaxSizeDiff=0.140541;ClusterMaxEditDist=0.205405;PBcalls=6;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=92;DistBack=4366;DistForward=91;DistMin=91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=92;REFWIDENED=21:41091359-41091450;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:35:./.:3:12:12:5:0|1:10:1:1:33:0/1:20:16:./.:.:.:.:.:.
chr21	41280137	HG2_PB_SVrefine2Falcon2Bionano_9491	T	TCAGATCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTTTGTATTCTTTTTTTTTTTTTTTAAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGATTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCTGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACACCCCCACCTCCCTCCCGGACGGGGAGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCGGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCGGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCACCTCCCTCCCGGACAGGGCGGCCGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGCGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACAGGGCGGCCGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTTCCTGACGGGGCGGCTGGCCAGGCGGGGGGCTTACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCACCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGTCGGGGGGGCTGACCCCCCACCTCCCTCCCAGATGGGGCGGCTGGCCGGGCGGGGGGTTGACCCCCTCCCACCTCCCTCCCGGACGGGGTGGCTGCTGGGCGGAGATGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCAGCCGGGCAGAGGCACTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCACACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGAGGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCTGAGGTTGGCGGGATCACTCGCGGTTAGGGGCTGGAGACCGGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAACCAGTCAGGCGTGGCGGCGCCATTGCAGGCACTGGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGCTCCGCATGAGAGGGAGACCGTGGGGAGAGGGAGACAGAGC	10	PASS	ClusterIDs=HG2_PB_HySA_34623:HG2_PB_pbsv_19184:HG2_PB_PB10Xdip_18934:HG2_PB_SVrefine2PBcRplusDovetail_6822:HG2_PB_SVrefine2PB10Xhap12_14018:HG2_PB_SVrefine2Falcon2Bionano_9491:HG2_PB_SVrefine2Falcon1plusDovetail_7351;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9491;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0326146;ClusterMaxSizeDiff=0.0315275;ClusterMaxEditDist=0.108715;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2756;DistBack=62993;DistForward=5839;DistMin=5839;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=21:41280138-41280151;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9993;PctRecOverlap=0.9993;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:55:0|1:25:6:3:22:./.:0:2:14:0:0/1:26:7:0/1:86:207:.:6829:.
chr21	41711678	HG3_Ill_250bpfermikitraw_24227	C	CAGACGGAAAATCCACACCCGCTCACTCCCACAAACAGTCACTTTATCTGTTAGGTTGGTGCAA	20	PASS	ClusterIDs=HG4_PB_HySA_27552:HG4_PB_pbsv_19119:HG3_PB_HySA_28583:HG2_PB_PB10Xdip_18974:HG2_PB_SVrefine2PB10Xhap12_14022:HG2_PB_SVrefine2PBcRplusDovetail_6825:HG3_PB_pbsv_18878:HG4_Ill_svaba_23270:HG2_PB_pbsv_19189:HG4_Ill_SVrefine2DISCOVARDovetail_13282:HG4_Ill_Krunchall_25585:HG4_Ill_GATKHC_29943:HG4_Ill_GATKHCSBGrefine_12899:HG4_Ill_250bpfermikitraw_24561:HG4_Ill_150bpfermikitraw_23629:HG3_PB_SVrefine2PBcRDovetail_9437:HG3_Ill_svaba_23583:HG3_Ill_Krunchall_24784:HG3_Ill_GATKHC_29900:HG3_Ill_GATKHCSBGrefine_12319:HG3_Ill_250bpfermikitraw_24227:HG2_PB_SVrefine2PB10Xhap12_14021:HG2_PB_SVrefine2Falcon2Bionano_9494:HG2_Ill_svaba_23356:HG2_Ill_manta_5068:HG2_Ill_Krunchall_25254:HG2_Ill_GATKHC_29985:HG2_Ill_GATKHCSBGrefine_12486:HG2_Ill_250bpfermikitraw_24933:HG2_Ill_150bpfermikitraw_23460:HG2_10X_SVrefine210Xhap12_13406:HG3_PB_SVrefine2Falcon1Dovetail_11946;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13406:HG2_Ill_150bpfermikitraw_23460:HG2_Ill_250bpfermikitraw_24933:HG2_Ill_GATKHCSBGrefine_12486:HG2_Ill_GATKHC_29985:HG2_Ill_Krunchall_25254:HG2_Ill_manta_5068:HG2_Ill_svaba_23356:HG2_PB_SVrefine2Falcon2Bionano_9494:HG2_PB_SVrefine2PB10Xhap12_14021:HG3_Ill_250bpfermikitraw_24227:HG3_Ill_GATKHCSBGrefine_12319:HG3_Ill_GATKHC_29900:HG3_Ill_Krunchall_24784:HG3_Ill_svaba_23583:HG3_PB_SVrefine2PBcRDovetail_9437:HG4_Ill_150bpfermikitraw_23629:HG4_Ill_250bpfermikitraw_24561:HG4_Ill_GATKHCSBGrefine_12899:HG4_Ill_GATKHC_29943:HG4_Ill_Krunchall_25585:HG4_Ill_SVrefine2DISCOVARDovetail_13282:HG4_Ill_svaba_23270;NumExactMatchSVs=23;ClusterMaxShiftDist=0.278689;ClusterMaxSizeDiff=0.262295;ClusterMaxEditDist=0.352941;PBcalls=12;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=63;DistBack=-62;DistForward=8289;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=64;REFWIDENED=21:41711679-41711742;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:48:./.:12:17:12:19:0|1:10:0:1:12:0/1:28:25:./.:.:.:.:.:.
chr21	43092795	HG2_PB_SVrefine2PB10Xhap12_14036	T	TCACACACACAAACCACACACACACCACAAACACCACATATACACCATGCATACATATGCCACACACACACACACCATGCACACATATACCACACACAGCACACACACACACAAACCACACACACATCATACACACATATACTACACACACCATATGCAAACTACACACACACACCACATAGACACCACACACACACCACATAGACACCACACACACATCACATAGACACCACACACAATGACCACAAACACAAACCACACCACAAACACCACAAATACCACACACACAAACACACCACACAGAACACACAGACACAACACACACACCACAAACACCACACACACAAACCACAGACACCATACACACACACACACTATGCACACATATACCACACACACACCACACACGCACATACATGCCTCACATACACACCACACACCACACCACACATACCACACACAGATACATGCCACACACTACACACACCACACACATACACCACACAGACACACACCACACATATACCACACGCACACCACACGCACACCACAAACACCACACACAAACTACACATACACACATCATATACACACCACATAACACACACACACACACCACATAGACACCACACTCAAACCACACACACAAATGACACACAGACGCCACACATACCACATAAACACCATACACACACAAACCACACTCACACACATCATACACACACGACATAACACACACACCACATACCACATAGACGCCACACACACATACCACATAGACACCACATACAACCCCCCCACACAAACCACAAAACACATGCCACACATACCACATAGATACAACACACATACCACAAACACCACAAACACCACACACAGAGAAACACACAAACACACCACATACCACACAGATACCACTCACACACCACAGATACCACGCACCACACAAACCACACACACACCCCCACACAGACACCATACACACACATTATGCACACATATACCACACACACACCACAGCACACACACACACATACACACCTCACACACACCACACACCACACCACACATACCACACAGAGATACATAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7360:HG3_PB_HySA_28604:HG4_PB_HySA_27571:HG4_PB_HySA_27570:HG2_PB_PB10Xdip_18989:HG4_Ill_MetaSV_3127:HG4_Ill_GATKHCSBGrefine_12910:HG3_Ill_MetaSV_3173:HG2_Ill_MetaSV_3017:HG2_Ill_GATKHCSBGrefine_12496:HG3_PB_SVrefine2Falcon1Dovetail_11957:HG4_PB_pbsv_19135:HG3_PB_pbsv_18891:HG4_PB_SVrefine2PBcRDovetail_9679:HG2_PB_pbsv_19204:HG4_Ill_SVrefine2DISCOVARDovetail_13294:HG3_PB_SVrefine2Falcon1Dovetail_11956:HG2_PB_SVrefine2PBcRplusDovetail_6832:HG2_PB_SVrefine2PB10Xhap12_14036:HG2_PB_SVrefine2Falcon2Bionano_9504:HG2_Ill_SVrefine2DISCOVARplusDovetail_7901:HG4_PB_SVrefine2Falcon1Dovetail_11975:HG3_PB_SVrefine2PBcRDovetail_9445:HG3_Ill_SVrefine2DISCOVARDovetail_13484;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7901:HG2_PB_SVrefine2Falcon2Bionano_9504:HG2_PB_SVrefine2PB10Xhap12_14036:HG2_PB_SVrefine2PBcRplusDovetail_6832:HG3_PB_SVrefine2Falcon1Dovetail_11956:HG4_Ill_SVrefine2DISCOVARDovetail_13294:HG4_PB_SVrefine2PBcRDovetail_9679;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0994624;ClusterMaxSizeDiff=0.0967742;ClusterMaxEditDist=0.22088;PBcalls=16;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=1089;DistBack=1685;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=236;REFWIDENED=21:43092796-43093031;PctSeqSimilarity=0.9638;PctSizeSimilarity=0.9629;PctRecOverlap=0.8276;SizeDiff=-42;StartDistance=-174;EndDistance=-174;GTMatch=0;TruScore=91;MatchId=3361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:24:0:27:1/1:1:65:2:76:./.:0:4:1/1:9:233:.:1185:.
chr21	43156187	HG4_PB_HySA_27574	T	TTCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9680:HG4_PB_assemblyticsfalcon_16009:HG2_PB_assemblyticsfalcon_16310:HG2_PB_SVrefine2Falcon2Bionano_9505:HG4_Ill_SVrefine2DISCOVARDovetail_13295:HG2_PB_SVrefine2Falcon1plusDovetail_7361:HG2_PB_pbsv_19206:HG4_PB_HySA_27574:HG4_PB_pbsv_19136:HG4_PB_SVrefine2Falcon1Dovetail_11976;NumClusterSVs=10;ExactMatchIDs=HG4_PB_HySA_27574;NumExactMatchSVs=1;ClusterMaxShiftDist=0.1843;ClusterMaxSizeDiff=0.1843;ClusterMaxEditDist=0.202091;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=159;DistBack=3013;DistForward=28;DistMin=28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=21:43156183-43156218;PctSeqSimilarity=0.9384;PctSizeSimilarity=0.8679;PctRecOverlap=0.7547;SizeDiff=21;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=85;MatchId=3362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:26:0|1:28:0:2:24:./.:5:20:13:4:0/1:29:9:./.:.:.:.:.:.
chr21	43528988	HG2_PB_HySA_34682	G	GCGGAAGTTCATGTTGTACTCAGGCTGACCCCACCCCCGCGTGGAAGTTCATGTTATACTCAGGCTGACCCCCACCCCGCGCGGAAGTTCATGTTGTACTCAGCTGGACCCACCCCCCACGCGGGAAGTTCATGTTATACTCAGGCTGACCCCCACCCCCGCGTGGGAAGTTCATGTTGTACTCAGCTGGACCCACCCCCGCGCGGAAGTCATGTTATACTCCGCTGGACCCCACCCAGCGTGGGAAGTTCATGTTATACTCCGCTGGACCCCCCCCGCGCGGGAGTTCATGTTATACTCCGCTGGACCCCACCCCCCGCGCGGGAAGTTCATGTTATACTCAGCTGGACCCCACCCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9510:HG2_PB_HySA_34682:HG2_PB_SVrefine2PBcRplusDovetail_6838:HG2_PB_pbsv_19214:HG2_PB_SVrefine2Falcon1plusDovetail_7368:HG4_PB_pbsv_19145;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_34682;NumExactMatchSVs=1;ClusterMaxShiftDist=0.117318;ClusterMaxSizeDiff=0.117318;ClusterMaxEditDist=0.212707;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=358;DistBack=11;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=342;REFWIDENED=21:43528946-43529287;PctSeqSimilarity=0.9704;PctSizeSimilarity=0.9421;PctRecOverlap=0.9423;SizeDiff=-22;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=95;MatchId=3364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:33:0|1:19:4:1:19:./.:4:45:14:1:0/1:16:5:0/1:5:17:.:.:.
chr21	44035355	HG2_PB_SVrefine2PBcRplusDovetail_6845	T	TCACACGCAGTACACACACACACCACACATACATCACACACCACACACACACTACACACACATCACACACCACACACCACATACACACACCACATACCACATACACCACACACCACACACAGTACACACACACCACACACCACACACACATCAAACACCACACACACTACACGCACACCACACACCACATACACACACACCACACACATACCACACACCACACATACCACACACCACACACACCACACACCACATACACACACACACCACACGCAGCACACACCACACACTACACACCACACACACACCACACACACATCACACACCATACACACTATGCGCATACCACACACCGCATACACACACACCACACACACACCACATACACACACCACACACACATCACACACCACACACACTACACACACCATACACCACATACACACCACACACACCACACACCACACACACCACATACACACACACCACACACCACACACACACTACACGCACACCACACACCACATACAAACACACCACGCACACCACACACACTACACACACACCACACACACTACACACACACCTCACACACCATACATACCACACACACCACACACACCACAAACGCACTATACACACTACACGCACACCACACACAAACACAAACACACTACACACACACCACACACCACAGACAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9690:HG3_PB_SVrefine2PBcRDovetail_9457:HG3_PB_SVrefine2Falcon1Dovetail_11970:HG2_PB_SVrefine2PBcRplusDovetail_6845:HG2_PB_SVrefine2PB10Xhap12_14054:HG2_PB_SVrefine2Falcon2Bionano_9516:HG2_PB_SVrefine2Falcon1plusDovetail_7375:HG4_PB_SVrefine2Falcon1Dovetail_11991;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9516:HG2_PB_SVrefine2PB10Xhap12_14054:HG2_PB_SVrefine2PBcRplusDovetail_6845:HG3_PB_SVrefine2Falcon1Dovetail_11970;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0527086;ClusterMaxSizeDiff=0.0527086;ClusterMaxEditDist=0.0737463;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=700;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=777;REFWIDENED=21:44035356-44036132;PctSeqSimilarity=0.9513;PctSizeSimilarity=0.9358;PctRecOverlap=0.5381;SizeDiff=-48;StartDistance=-322;EndDistance=-322;GTMatch=0;TruScore=80;MatchId=3365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:119:./.:1:7:0:4:./.:3:38:7:48:./.:0:2:1/1:7:116:2042:.:.
chr21	44198613	HG2_PB_SVrefine2Falcon2Bionano_9518	G	GGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9518:HG3_PB_SVrefine2Falcon1Dovetail_11972:HG4_PB_SVrefine2PBcRDovetail_9692:HG2_PB_HySA_34710:HG2_PB_pbsv_19226:HG3_Ill_SVrefine2DISCOVARDovetail_13496:HG4_PB_pbsv_19159:HG3_PB_pbsv_18909;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9518:HG3_Ill_SVrefine2DISCOVARDovetail_13496;NumExactMatchSVs=2;ClusterMaxShiftDist=0.118919;ClusterMaxSizeDiff=0.118919;ClusterMaxEditDist=0.322917;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=97;DistBack=9004;DistForward=26;DistMin=26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=146;REFWIDENED=21:44198614-44198759;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9898;PctRecOverlap=0.3838;SizeDiff=-1;StartDistance=-60;EndDistance=-60;GTMatch=0;TruScore=78;MatchId=3366.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:27:0|1:39:2:1:25:./.:2:0:2:0:0/1:24:12:./.:.:.:.:.:.
chr21	44261545	HG2_PB_assemblyticsfalcon_16340	A	AACTGCACTCTTAGGGCCAGCCCTCCCCACACCACCTCCACCCCTGGCACAACCCCTTGCACC	20	PASS	ClusterIDs=HG3_PB_pbsv_18911:HG2_PB_pbsv_19227:HG3_PB_HySA_28645:HG3_Ill_Krunchall_24833:HG3_Ill_GATKHC_29965:HG3_Ill_GATKHCSBGrefine_12340:HG3_Ill_250bpfermikitraw_24272:HG2_PB_assemblyticsfalcon_16340:HG2_Ill_manta_5084:HG2_Ill_SpiralSDKrefine_10289:HG2_Ill_Krunchall_25311:HG2_Ill_GATKHC_30062:HG2_Ill_GATKHCSBGrefine_12506:HG2_Ill_250bpfermikitraw_24989:HG2_PB_HySA_34714;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24989:HG2_Ill_GATKHCSBGrefine_12506:HG2_Ill_GATKHC_30062:HG2_Ill_Krunchall_25311:HG2_Ill_SpiralSDKrefine_10289:HG2_Ill_manta_5084:HG2_PB_assemblyticsfalcon_16340:HG3_Ill_250bpfermikitraw_24272:HG3_Ill_GATKHCSBGrefine_12340:HG3_Ill_GATKHC_29965:HG3_Ill_Krunchall_24833;NumExactMatchSVs=11;ClusterMaxShiftDist=0.170543;ClusterMaxSizeDiff=0.170543;ClusterMaxEditDist=0.192;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=348;DistForward=6852;DistMin=348;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5;REFWIDENED=21:44261546-44261550;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:27:./.:19:5:10:20:0|1:36:0:1:21:0/1:18:20:./.:.:.:.:.:.
chr21	44341803	HG3_Ill_GATKHC_29967	T	TGGGTGCTGTCTCTAAAACCTTGAGGTAGTAGGCACCAGTGAGCTGATGTGAAAGGC	20	PASS	ClusterIDs=HG4_PB_HySA_27608:HG3_PB_HySA_28650:HG4_PB_assemblyticsfalcon_16057:HG4_Ill_Krunchall_25640:HG2_PB_pbsv_19234:HG4_Ill_GATKHC_30011:HG3_PB_pbsv_18918:HG4_Ill_250bpfermikitraw_24616:HG4_PB_pbsv_19166:HG3_Ill_Krunchall_24835:HG3_Ill_GATKHC_29967:HG3_Ill_250bpfermikitraw_24274:HG2_Ill_GATKHC_30067:HG2_Ill_250bpfermikitraw_24993:HG2_PB_PB10Xdip_19038:HG3_PB_SVrefine2PBcRDovetail_9462:HG3_Ill_SVrefine2DISCOVARDovetail_13498:HG2_PB_SVrefine2PBcRplusDovetail_6849:HG2_PB_SVrefine2PB10Xhap12_14059:HG2_PB_SVrefine2Falcon2Bionano_9522:HG2_Ill_SVrefine2DISCOVARplusDovetail_7913;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24993:HG2_Ill_GATKHC_30067:HG3_Ill_250bpfermikitraw_24274:HG3_Ill_GATKHC_29967:HG3_Ill_Krunchall_24835:HG4_Ill_250bpfermikitraw_24616:HG4_Ill_GATKHC_30011:HG4_Ill_Krunchall_25640;NumExactMatchSVs=8;ClusterMaxShiftDist=0.198198;ClusterMaxSizeDiff=0.198198;ClusterMaxEditDist=0.363636;PBcalls=11;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=5;DistForward=114;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=123;REFWIDENED=21:44341798-44341920;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3368.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:1/1:3:21:1:24:./.:6:9:6:5:0/1:12:35:./.:.:.:.:.:.
chr21	44385882	HG4_Ill_SVrefine2DISCOVARDovetail_13305	T	TAAAATAAAATTAAAAAGAAGGCCAGTTTTGCCGGGCGCGGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGTTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7379:HG4_PB_SVrefine2Falcon1Dovetail_11993:HG2_PB_pbsv_19236:HG4_PB_pbsv_19168:HG4_PB_HySA_27609:HG4_Ill_MetaSV_3135:HG3_PB_HySA_28652:HG3_PB_pbsv_18920:HG2_Ill_breakscan11_4964:HG4_Ill_GATKHCSBGrefine_12928:HG2_Ill_MetaSV_3024:HG2_Ill_GATKHCSBGrefine_12512:HG2_PB_PB10Xdip_19040:HG3_PB_SVrefine2PBcRDovetail_9463:HG3_PB_SVrefine2Falcon1Dovetail_11976:HG4_PB_SVrefine2PBcRDovetail_9696:HG4_Ill_SVrefine2DISCOVARDovetail_13305:HG2_PB_SVrefine2PBcRplusDovetail_6850:HG2_PB_SVrefine2PB10Xhap12_14060:HG2_PB_SVrefine2Falcon2Bionano_9523:HG2_Ill_SVrefine2DISCOVARplusDovetail_7914:HG2_10X_SVrefine210Xhap12_13442;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13442:HG2_Ill_SVrefine2DISCOVARplusDovetail_7914:HG2_PB_SVrefine2Falcon2Bionano_9523:HG2_PB_SVrefine2PB10Xhap12_14060:HG2_PB_SVrefine2PBcRplusDovetail_6850:HG4_Ill_SVrefine2DISCOVARDovetail_13305:HG4_PB_SVrefine2PBcRDovetail_9696;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.068323;ClusterMaxEditDist=0.215716;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=320;DistBack=2872;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=272;REFWIDENED=21:44385883-44386154;PctSeqSimilarity=0.9955;PctSizeSimilarity=1;PctRecOverlap=0.9657;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=98;MatchId=3369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:67:./.:0:0:0:1:./.:0:0:0:0:1/1:0:28:1/1:1:63:.:.:.
chr21	44458143	HG4_Ill_150bpfermikitraw_23681	G	GCTCACTGCAGCCTCGCCTGTGGCGGCAGGGGTTACAGAAGAAGCGTGGACACCTGCATGGAGGGGAACACA	20	PASS	ClusterIDs=HG2_Ill_manta_5088:HG3_PB_pbsv_18922:HG4_PB_pbsv_19170:HG2_PB_pbsv_19238:HG4_Ill_Krunchall_25646:HG4_Ill_GATKHC_30019:HG4_Ill_GATKHCSBGrefine_12929:HG4_Ill_250bpfermikitraw_24621:HG4_Ill_150bpfermikitraw_23681:HG3_Ill_Krunchall_24840:HG3_Ill_GATKHC_29974:HG3_Ill_GATKHCSBGrefine_12344:HG3_Ill_250bpfermikitraw_24278:HG3_Ill_150bpfermikitraw_23560:HG2_Ill_Krunchall_25318:HG2_Ill_GATKHC_30073:HG2_Ill_GATKHCSBGrefine_12513:HG2_Ill_250bpfermikitraw_24997:HG2_Ill_150bpfermikitraw_23517;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23517:HG2_Ill_250bpfermikitraw_24997:HG2_Ill_GATKHCSBGrefine_12513:HG2_Ill_GATKHC_30073:HG2_Ill_Krunchall_25318:HG3_Ill_150bpfermikitraw_23560:HG3_Ill_250bpfermikitraw_24278:HG3_Ill_GATKHCSBGrefine_12344:HG3_Ill_GATKHC_29974:HG3_Ill_Krunchall_24840:HG4_Ill_150bpfermikitraw_23681:HG4_Ill_250bpfermikitraw_24621:HG4_Ill_GATKHCSBGrefine_12929:HG4_Ill_GATKHC_30019:HG4_Ill_Krunchall_25646;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0416667;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.164384;PBcalls=3;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=2131;DistForward=51;DistMin=51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=53;REFWIDENED=21:44458144-44458196;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3370.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:26:0|1:28:1:3:23:0|1:9:0:0:20:0/1:25:23:./.:.:.:.:.:.
chr21	44712389	HG3_Ill_150bpfermikitraw_23566	A	AGGACAGCAAGGCCGAGACAGCAAGGCCGAGGACAGCAAAGCCGAGACAGCAAGGCCGAGACAGCAAGGCCGAG	20	PASS	ClusterIDs=HG4_PB_pbsv_19175:HG4_Ill_Krunchall_25649:HG4_PB_HySA_27616:HG4_Ill_GATKHC_30024:HG4_Ill_GATKHCSBGrefine_12931:HG4_Ill_250bpfermikitraw_24624:HG3_Ill_Krunchall_24843:HG3_Ill_GATKHC_29979:HG3_Ill_GATKHCSBGrefine_12345:HG3_Ill_250bpfermikitraw_24281:HG3_Ill_150bpfermikitraw_23566:HG2_Ill_Krunchall_25321:HG2_Ill_GATKHC_30077:HG2_Ill_GATKHCSBGrefine_12514:HG2_Ill_250bpfermikitraw_25000:HG2_Ill_150bpfermikitraw_23519:HG2_PB_HySA_34727:HG4_PB_assemblyticsfalcon_16066:HG2_PB_assemblyticsfalcon_16352:HG2_PB_assemblyticsPBcR_15867:HG2_PB_PB10Xdip_19045:HG2_PB_pbsv_19241:HG3_PB_pbsv_18926;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23519:HG2_Ill_250bpfermikitraw_25000:HG2_Ill_GATKHCSBGrefine_12514:HG2_Ill_GATKHC_30077:HG2_Ill_Krunchall_25321:HG3_Ill_150bpfermikitraw_23566:HG3_Ill_250bpfermikitraw_24281:HG3_Ill_GATKHCSBGrefine_12345:HG3_Ill_GATKHC_29979:HG3_Ill_Krunchall_24843:HG4_Ill_250bpfermikitraw_24624:HG4_Ill_GATKHCSBGrefine_12931:HG4_Ill_GATKHC_30024:HG4_Ill_Krunchall_25649;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0933333;ClusterMaxSizeDiff=0.0533333;ClusterMaxEditDist=0.226667;PBcalls=9;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=73;DistBack=13;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=21:44712388-44712391;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3371.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:42:1/1:1:18:0:7:./.:0:4:1:5:./.:3:35:./.:.:.:.:.:.
chr21	44732920	HG4_PB_SVrefine2PBcRDovetail_9699	G	GCTTCTGCGAACTCAGGGTTTTCTGGTGTAGCCATCTCCTTCCTGGGCCTTCTGTGAACTCAGGGTTTTCTGGTGTAGCCATCTCCTTCCTGGGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7919:HG2_PB_pbsv_19242:HG4_PB_HySA_27617:HG4_PB_pbsv_19176:HG2_PB_PB10Xdip_19046:HG3_PB_pbsv_18927:HG3_PB_HySA_28659:HG2_PB_HySA_34728:HG4_PB_SVrefine2PBcRDovetail_9699:HG4_PB_SVrefine2Falcon1Dovetail_11998:HG4_Ill_SVrefine2DISCOVARDovetail_13307:HG3_PB_SVrefine2PBcRDovetail_9467:HG3_PB_SVrefine2Falcon1Dovetail_11981:HG3_Ill_SVrefine2DISCOVARDovetail_13502:HG2_PB_SVrefine2PBcRplusDovetail_6854:HG2_PB_SVrefine2PB10Xhap12_14064:HG2_PB_SVrefine2Falcon2Bionano_9527:HG2_PB_SVrefine2Falcon1plusDovetail_7383;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7919:HG4_PB_SVrefine2PBcRDovetail_9699:HG4_PB_SVrefine2Falcon1Dovetail_11998:HG4_Ill_SVrefine2DISCOVARDovetail_13307:HG3_PB_SVrefine2PBcRDovetail_9467:HG3_PB_SVrefine2Falcon1Dovetail_11981:HG3_Ill_SVrefine2DISCOVARDovetail_13502:HG2_PB_SVrefine2PBcRplusDovetail_6854:HG2_PB_SVrefine2PB10Xhap12_14064:HG2_PB_SVrefine2Falcon2Bionano_9527:HG2_PB_SVrefine2Falcon1plusDovetail_7383;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0829016;ClusterMaxSizeDiff=0.0518135;ClusterMaxEditDist=0.285714;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=94;DistBack=-94;DistForward=-1;DistMin=-94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=142;REFWIDENED=21:44732921-44733062;PctSeqSimilarity=0.9951;PctSizeSimilarity=1;PctRecOverlap=0.9263;SizeDiff=0;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=97;MatchId=3372.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:1/1:0:25:1:24:./.:0:1:3:1:0/1:7:23:./.:.:.:.:.:.
chr21	45243026	HG4_Ill_GATKHC_30031	G	GCCTCCAGAAGGAACATAACCCTATTGACACCCTGATTTCAGCCCAGTAGTTGTGATTTTGGATTTCTCA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_25005:HG4_PB_pbsv_19184:HG4_Ill_Krunchall_25655:HG2_PB_pbsv_19251:HG4_Ill_GATKHC_30031:HG2_PB_assemblyticsPBcR_15880:HG4_Ill_GATKHCSBGrefine_12935:HG2_PB_SVrefine2Falcon2Bionano_9528:HG2_Ill_GATKHC_30084:HG2_Ill_GATKHCSBGrefine_12517;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25005:HG4_Ill_Krunchall_25655:HG4_Ill_GATKHC_30031:HG4_Ill_GATKHCSBGrefine_12935:HG2_PB_SVrefine2Falcon2Bionano_9528:HG2_Ill_GATKHC_30084:HG2_Ill_GATKHCSBGrefine_12517;NumExactMatchSVs=7;ClusterMaxShiftDist=0.261538;ClusterMaxSizeDiff=0.215385;ClusterMaxEditDist=0.356589;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=69;DistBack=2216;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=78;REFWIDENED=21:45243027-45243104;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3374.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:29:1|0:4:26:26:2:./.:7:0:2:12:0/1:19:22:./.:.:.:.:.:.
chr21	45567452	HG2_PB_SVrefine2Falcon1plusDovetail_7391	T	TCCACCACTCCCAGCTCCCCCAGCACTCCCAGCTGCTCCACACTCAGTCCCCTGCTCCACACTCAGCCCCCAGCTCCCCCACCATTCCCAGCTGCTCCACACTCAGCCCCCAGCACCCCCACCACTCCCAGCTGCTCCACACTCAACCCCCAGCTCCCCCACCACTCCCAGCTGCTCCACACTCAACCCCCAGCTCCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12006:HG2_PB_HySA_34740:HG4_PB_pbsv_19185:HG2_PB_PB10Xdip_19052:HG3_PB_pbsv_18941:HG2_PB_pbsv_19252:HG2_PB_SVrefine2PBcRplusDovetail_6858:HG2_PB_SVrefine2PB10Xhap12_14068:HG2_PB_SVrefine2Falcon2Bionano_9529:HG2_PB_SVrefine2Falcon1plusDovetail_7391:HG4_PB_SVrefine2PBcRDovetail_9703;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7391:HG2_PB_SVrefine2Falcon2Bionano_9529:HG2_PB_SVrefine2PB10Xhap12_14068:HG2_PB_SVrefine2PBcRplusDovetail_6858;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0506329;ClusterMaxSizeDiff=0.040201;ClusterMaxEditDist=0.297767;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=197;DistBack=649;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=214;REFWIDENED=21:45567453-45567666;PctSeqSimilarity=0.9681;PctSizeSimilarity=0.985;PctRecOverlap=0.4229;SizeDiff=-3;StartDistance=-114;EndDistance=-114;GTMatch=0;TruScore=79;MatchId=3375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:55:1/1:1:9:1:9:1/1:1:6:1:5:./.:0:1:./.:.:.:.:.:.
chr21	45585472	HG3_PB_SVrefine2PBcRDovetail_9478	G	GGAGGGGCCTGTGTGGCAGGCGGGTGGCATGAGGGTGAGGGGCCTGTGTGGCAGGCGGGTGGCCTGAGGGT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7925:HG3_PB_pbsv_18943:HG3_PB_HySA_28677:HG2_PB_HySA_34741:HG2_PB_PB10Xdip_19053:HG2_PB_pbsv_19254:HG3_PB_SVrefine2PBcRDovetail_9478:HG2_PB_SVrefine2PBcRplusDovetail_6860:HG2_PB_SVrefine2PB10Xhap12_14070:HG2_PB_SVrefine2Falcon2Bionano_9531:HG2_PB_SVrefine2Falcon1plusDovetail_7392;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7925:HG3_PB_SVrefine2PBcRDovetail_9478:HG2_PB_SVrefine2PBcRplusDovetail_6860:HG2_PB_SVrefine2PB10Xhap12_14070:HG2_PB_SVrefine2Falcon2Bionano_9531:HG2_PB_SVrefine2Falcon1plusDovetail_7392;NumExactMatchSVs=6;ClusterMaxShiftDist=0.056338;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.236111;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=1238;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=202;REFWIDENED=21:45585473-45585674;PctSeqSimilarity=0.9941;PctSizeSimilarity=1;PctRecOverlap=0.8028;SizeDiff=0;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=93;MatchId=3376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:58:1/1:1:27:1:13:./.:3:4:2:1:0/1:6:7:./.:.:.:.:.:.
chr21	45649510	HG3_Ill_SVrefine2DISCOVARDovetail_13513	A	AGGGGCTGGGCGCCGGTGCCTGGACCCGCCCTGCACACCCCACGGGGGCTGGGCGCCGGTGCCTGGACCCACTCCGGACACCCCATGGGGGCTGGGCGCCGGTGCCTGGACCCGCCCTGGACACCCCACG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12009:HG2_PB_assemblyticsfalcon_16377:HG3_PB_pbsv_18947:HG3_PB_SVrefine2Falcon1Dovetail_11988:HG2_PB_PB10Xdip_19054:HG2_PB_SVrefine2PB10Xhap12_14072:HG2_PB_pbsv_19258:HG2_PB_SVrefine2Falcon1plusDovetail_7394:HG4_Ill_SVrefine2DISCOVARDovetail_13313:HG4_Ill_250bpfermikitraw_24637:HG3_Ill_SVrefine2DISCOVARDovetail_13513:HG3_PB_SVrefine2PBcRDovetail_9480:HG4_PB_pbsv_19192;NumClusterSVs=13;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_13513:HG4_Ill_250bpfermikitraw_24637:HG4_Ill_SVrefine2DISCOVARDovetail_13313;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0697674;ClusterMaxSizeDiff=0.0620155;ClusterMaxEditDist=0.253846;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=129;DistBack=-140;DistForward=123;DistMin=-140;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=156;REFWIDENED=21:45649480-45649635;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3377.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:50:./.:21:9:4:36:0|1:5:0:0:8:0/1:24:14:./.:.:.:.:.:.
chr21	45839399	HG2_PB_SVrefine2PB10Xhap12_14075	G	GTGGGGGCGGTGGTGGTGATGGTGATGATGGTGGCTGCGATGGTGATGGTGGTGGTGGTGGGGTGCTGGTGATGGTGGTGGATAGTGGTGATGGTGGTAGTGGTGATGGTGATGATGGTGATGGTAGTGGTTGTGCTGATGGTGGTGATGGTGGTGGTGAGGGTGATGATGGTTACGGTGGTGGTAGTGGTGGTGATGGTGGTAGTGGTGATGGTGATGATGGTGATGGTAGTGGTTGTGCTGGTTATGGTGATGGTAGTGGTGAGGATGATGGTGGTGATGGTAGTGGTAGTGATGGTGATGGTGATGGTAGTGGTGAGGGTGATGATGGTGATGGTGGTGGTAGTGATGGTGATGGTGGTAGTGGTGATGATGGTGATGGTAGTGGTTGTGCTGGTGATGGTGGTGATGGTAGTGGTGAGGATGATGGTGGTGATGGTGGTGGTTGTGCTGGTGATGGTGGTGATGGTAGTGGTGAGGGTGATGATGGTGATGGTGGTGGTAGTGATGGTGATGGTGGTGATGGTAGTGGTGAGGGTGATGATGGTGATGGTGGTGGTAGTGATGGTGATGGTGGTAGGGATGATGCTGGTGATAGTGGTTGTATTAGTCTGTTTTCATGCTGCTGATAAAGACATACCTGAGACTGGGAAGAAAAAGAGGTTTAGTGGATTCAGTGCCACATGGCTGGGGAGGCCTCACAATCATGGAAGGCAAGGAGGAACAAGTCATGTCTTACATGGATAGTGGCAGGCAAAGAGAGAGAACTTGTGCAGGGGACCTCCTCTTTATAAAACCACTAGATCTCATGAGACTTATTCACTATATGAGAACAGCATGAGAAAGACCTGCCCCCATGATTCAATTACCTCCTAATGGGTCCTTGCCACAACATGTGGGAATTGTGGGAGATACAAGTCAAGATGAGATTTGGGTGGGGACACAGCCAAACCATATCATTCTGCTCCTGCCCCCTCCCAAATCTCATGTCCTCACATTTCAAAACTAATCATACCTTCCCAACAGTCCCCCAAAGCCTTAACTCATTTCAACATTAACCTAAAAGTCCACAGTCCAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCCACCCATGAGCTGTAAAATCAAAAGCAAGCTAGTTACTTCCTAGATACAATGGCAGTACAGGTATTGAGTAAATACATCCATTCCAAGTGGGAGAAATTAGCCAAAACAAAGGGGCTACATGGCCCATGCGAGTCCAAAATCTAGTAGGGCAGTCAGATCTTACAGCTCTACAATGATCTCTTTTGACTCTATGTCTCACATTGAAGTCACACTGATATAAGAGGTAGGCTCCCATCTTGAGCAGTTCCGCCTTTGTGGCTTTGCAGGGTACAGTCTCCCTCCAAGCTGCTTTCATGGGCTGGCATTGAGTGCCTGCAGCTTTTCCAGGTGCACAGTGCGAGCTGTCGATGGAGCTACCATTCTGGGGTCTGAAGAACAGTGGCCCTCTTCTCACAGCTCCACTAGGCAGTGCCCCAGTAGGGACTCTGTGTGGGGACTCTGACCCCTCGTTTGCCTTCTGCACTGCCTTAGCAGAGGTTCTCCATGAGGGCCCCATCCCTGCAGTAAACTTCTGCGTGCACACCCAGGCATTTCCATACATCCTCTGAAATCTAGGTGGAGGTTCCCAAACCTCGATTCTTGACTTCTGTGCACCTGCAGGCTCAATACCACATGGAAGTTGCCAACGCTTGGGGTTTGCACCCTCTGAAGCAACAGCCCAAGCTGCACCTTGGCCCCTTTTAGTCACAGCTGGAGTGGCTGGGATGCAGGGCACCAAGTCCCTAAACAGCATGGTGACCCTGGGGCCCGGCCCATGGGTCTTCTCTAGGCCTCTGGGCCTGTGATGGGAGGGGCTGCTGTGAAGACCTCTGACATGCCCTGGAGACATTTTCCCCATTGTCTTGGGGATTAACATTTGGCTTCTTATTATTTATGCAAATTTCTGCAGCTGGCTTGAATTTCTCCTCAGAAGATGGGATTTTCTTTTCTGTTCCATTGTCAGGCTGCAAATTTTACAAACTTTTATGTTCTGCTTCCCTTATAAAACTGAATGCCTTTAACAGCACCTAAGTCACCTCTTGAATACTTTGCTGCTTAGAAATTTCTTCTGCCAGATCCCCTAAATCATCTCTCTCTTTCAAGTTCAAAGTTCCACAAATCTCTAAGGTGGAGGCAAAATGCCACCAGTCTCTTTGCTAAAACATAACAAGAGTCACCTTTAATCCAGTTCCCAACAAGTTCCTCATCTCCTTCTGAGACCACCTCAGCCTGGACCTTATTGTTCATGTCACTATCAGCTTTTTTGTCAAAGCCATTCAACAAATCTCTAGGAAGTTCCAAACTTTCCCACATTTTCCTGTCTTCTTCTGAGCCCTCCAAACTGTTCCAACTTCTGCCTATTACCTAGTTCCAAAGTTGCTTCCACATTTTCAGGTATCTTTTCAGTAACACCCCACTCTACTGGTACCAATTTACTGTATTAGTCCATTTTCACACTGCTGATAAAAACATACCTGAGACTGGGAAGAAAAAGAGGTTTAACGGACTCACAGTTCCACATGACTGGGGAGGCCTCACAATCATGGCAGAGGGCAAGGAGGAGCAAGTCACATCTTACATGGATGGCGGCAGGCAAAGAGGGAGAACTTGTGAAGGAGAACTCCTCTTTATAAAACCATCAGATCTCATGAGACTTATTCCCTACCACGAAAACAGCACAAGAAAGACCTGCCCCCAAGATTCAATTACCTCCCACTGGGCCCCTCCTATGACACGTGGGAATTGTGAGAGTTACAATTCAAGGTGAGATTTGGGTGGGGACACAGCCAAATTTTGTGTCCCCACCCATGTGATGGTGAGGATGGTGATGGTGATGGTGATGGTGGTAATAGTAGTGGTGGTGATGGTGATGATGGTGGTGATGGTGATGATGGTGATGGTAGTGGTTGTGCTGGTAATTGTGGTGGTGGTGATGGTGGTGGTGATGGTGATGATGATGGTGATGGTAGTGGTAGTGGTGGTGATGGTGGTGACAATGGTGTTTGTGATGGTCGTGACGGTAATGGTGATGATGGTGATGATGGTGGTGGTAGTGATAGTCATGGTGGTGGGTGATGGTGATGGTGGTAGTGGTGATGATGGTGATGGTAGTGGTCATGATGGTGGTGATGGTGGTGGTGATGACGGTGATGATAGTGGTTGTGCTGGTAATGGTGGTGGTGATGGTAGTGGTGGTAGTGGTGATGTTGGTGATGATGGTGATGTGGTGATTGTGATGGTGGTGCTGGTGGTGATGGTAGTGATGGTGATGATGGTGATTCTGATGGCTGTAATGGAAGTGGTGGTGATGGTGGTGGTGATGGTAGTGGTGGTGATGTTGATGGTGATGATGGCAGTGGTGGTGGTGGTGATGGTAGTGGTGATGATGTTGATGGTGATGATGGCAGTGGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTAGCGGTGATGGTGGTGGTGGTGATGATGGTGATGGTAGTGGTCATGATGGTGGTGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9706:HG2_PB_PB10Xdip_19057:HG2_PB_HySA_34756:HG3_PB_HySA_28688:HG4_PB_HySA_27635:HG4_PB_HySA_27634:HG3_PB_SVrefine2Falcon1Dovetail_11989:HG2_PB_SVrefine2PBcRplusDovetail_6863:HG2_PB_SVrefine2PB10Xhap12_14075:HG2_PB_SVrefine2Falcon2Bionano_9534:HG3_PB_SVrefine2PBcRDovetail_9482;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9534:HG2_PB_SVrefine2PB10Xhap12_14075:HG2_PB_SVrefine2PBcRplusDovetail_6863;NumExactMatchSVs=3;ClusterMaxShiftDist=0.119198;ClusterMaxSizeDiff=0.119198;ClusterMaxEditDist=0.13543;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=3585;DistBack=1826;DistForward=54;DistMin=54;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=492;REFWIDENED=21:45839400-45839891;PctSeqSimilarity=0.9985;PctSizeSimilarity=1;PctRecOverlap=0.9866;SizeDiff=0;StartDistance=-48;EndDistance=-48;GTMatch=0;TruScore=99;MatchId=3379.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:92:1/1:0:21:0:18:1/1:2:262:1:199:1/1:0:13:1/1:0:694:.:7865:.
chr21	45888357	HG3_PB_SVrefine2PBcRDovetail_9485	C	CCTCCTGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGCACCACCACGCCCGGCTAATTTTTGTATTTTTAGCAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13463:HG4_PB_HySA_27640:HG2_PB_pbsv_19266:HG2_PB_HySA_34763:HG4_PB_pbsv_19200:HG3_PB_pbsv_18955:HG3_PB_HySA_28697:HG4_Ill_svaba_23358:HG4_Ill_MetaSV_3142:HG4_Ill_GATKHCSBGrefine_12942:HG4_Ill_250bpfermikitraw_24642:HG4_Ill_150bpfermikitraw_23700:HG3_Ill_svaba_23669:HG3_Ill_MetaSV_3188:HG3_Ill_GATKHCSBGrefine_12356:HG2_Ill_svaba_23450:HG2_Ill_MetaSV_3031:HG2_Ill_GATKHCSBGrefine_12526:HG2_PB_PB10Xdip_19059:HG4_PB_SVrefine2PBcRDovetail_9709:HG4_PB_SVrefine2Falcon1Dovetail_12012:HG4_Ill_SVrefine2DISCOVARDovetail_13316:HG3_PB_SVrefine2PBcRDovetail_9485:HG3_PB_SVrefine2Falcon1Dovetail_11992:HG3_Ill_SVrefine2DISCOVARDovetail_13518:HG2_PB_SVrefine2PBcRplusDovetail_6866:HG2_PB_SVrefine2PB10Xhap12_14078:HG2_PB_SVrefine2Falcon2Bionano_9537:HG2_PB_SVrefine2Falcon1plusDovetail_7398:HG2_Ill_SVrefine2DISCOVARplusDovetail_7932;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13463:HG4_PB_SVrefine2PBcRDovetail_9709:HG4_PB_SVrefine2Falcon1Dovetail_12012:HG4_Ill_SVrefine2DISCOVARDovetail_13316:HG3_PB_SVrefine2PBcRDovetail_9485:HG3_PB_SVrefine2Falcon1Dovetail_11992:HG3_Ill_SVrefine2DISCOVARDovetail_13518:HG2_PB_SVrefine2PBcRplusDovetail_6866:HG2_PB_SVrefine2PB10Xhap12_14078:HG2_PB_SVrefine2Falcon2Bionano_9537:HG2_PB_SVrefine2Falcon1plusDovetail_7398:HG2_Ill_SVrefine2DISCOVARplusDovetail_7932;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0647482;ClusterMaxSizeDiff=0.057554;ClusterMaxEditDist=0.24911;PBcalls=15;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=135;DistBack=2388;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=39;REFWIDENED=21:45888358-45888396;PctSeqSimilarity=0.9844;PctSizeSimilarity=1;PctRecOverlap=0.8222;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=93;MatchId=3380.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:3:34:0:14:./.:1:4:0:7:1/1:0:29:./.:.:.:.:.:.
chr21	46237814	HG2_PB_SVrefine2Falcon1plusDovetail_7401	G	GCGGGGCGCGCCGCCGAGCGCAGCCGGGCGGGGGAGGGGAGCGGCGCGGCCGGACGGGAGCGGGGGAGGGGCGGGGGCGCGGGCGGCGCCGCAGGCCTGGGCGCGGGTCCCCGTGGGCGCCGCCGTCTCCAAGGGCCGCAGGAGCGGCGCGCGGCGGCGGAGGCGCC	20	PASS	ClusterIDs=HG4_PB_pbsv_19205:HG3_PB_pbsv_18962:HG2_PB_assemblyticsfalcon_16396:HG4_PB_HySA_27650:HG2_PB_HySA_34779:HG3_PB_HySA_28712:HG4_PB_SVrefine2PBcRDovetail_9712:HG4_Ill_SVrefine2DISCOVARDovetail_13317:HG4_Ill_MetaSV_3145:HG4_Ill_GATKHCSBGrefine_12945:HG4_Ill_250bpfermikitraw_24651:HG3_PB_SVrefine2PBcRDovetail_9489:HG3_Ill_SVrefine2DISCOVARDovetail_13522:HG3_Ill_MetaSV_3192:HG3_Ill_GATKHCSBGrefine_12359:HG2_PB_SVrefine2PBcRplusDovetail_6870:HG2_PB_SVrefine2PB10Xhap12_14083:HG2_PB_SVrefine2Falcon1plusDovetail_7401:HG2_Ill_SVrefine2DISCOVARplusDovetail_7937:HG2_Ill_MetaSV_3035:HG2_Ill_GATKHCSBGrefine_12528:HG3_PB_SVrefine2Falcon1Dovetail_11995:HG2_PB_SVrefine2Falcon2Bionano_9540:HG2_PB_PB10Xdip_19063:HG2_Ill_breakscan11_4966:HG4_PB_SVrefine2Falcon1Dovetail_12013:HG2_PB_pbsv_19273;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12528:HG2_Ill_MetaSV_3035:HG2_Ill_SVrefine2DISCOVARplusDovetail_7937:HG2_PB_SVrefine2Falcon1plusDovetail_7401:HG2_PB_SVrefine2PB10Xhap12_14083:HG2_PB_SVrefine2PBcRplusDovetail_6870:HG3_Ill_GATKHCSBGrefine_12359:HG3_Ill_MetaSV_3192:HG3_Ill_SVrefine2DISCOVARDovetail_13522:HG3_PB_SVrefine2PBcRDovetail_9489:HG4_Ill_250bpfermikitraw_24651:HG4_Ill_GATKHCSBGrefine_12945:HG4_Ill_MetaSV_3145:HG4_Ill_SVrefine2DISCOVARDovetail_13317:HG4_PB_SVrefine2PBcRDovetail_9712;NumExactMatchSVs=15;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.225;PBcalls=16;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=166;DistBack=0;DistForward=11;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=21:46237815-46237826;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:55:1/1:5:29:1:22:./.:0:4:0:8:1/1:0:10:./.:.:.:.:.:.
chr21	46373350	HG3_Ill_SVrefine2DISCOVARDovetail_13523	G	GGCACCATCCCCGGCGGTGGGGCCCTGCGTCCGGGCCTCGGGAGCCTGTCCT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_25034:HG2_PB_assemblyticsfalcon_16407:HG2_PB_HySA_34788:HG4_PB_HySA_27656:HG4_Ill_250bpfermikitraw_24655:HG3_Ill_SVrefine2DISCOVARDovetail_13523:HG3_Ill_Krunchall_24880:HG3_Ill_250bpfermikitraw_24312:HG2_PB_SVrefine2Falcon2Bionano_9545:HG2_Ill_Krunchall_25352:HG2_Ill_GATKHCSBGrefine_12531;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25034:HG4_Ill_250bpfermikitraw_24655:HG3_Ill_SVrefine2DISCOVARDovetail_13523:HG3_Ill_Krunchall_24880:HG3_Ill_250bpfermikitraw_24312:HG2_PB_SVrefine2Falcon2Bionano_9545:HG2_Ill_Krunchall_25352:HG2_Ill_GATKHCSBGrefine_12531;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.196078;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=51;DistBack=24436;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=154;REFWIDENED=21:46373351-46373504;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:45:./.:22:10:12:22:./.:8:1:5:0:0/1:26:19:./.:.:.:.:.:.
chr21	46391056	HG2_Ill_150bpfermikitraw_23548	G	GCCTCCTGTGTGCGCTTTGTGGGCGATTGTCGGGAGGGGACCCCCCACGCTCTGGACCTCCA	20	PASS	ClusterIDs=HG2_PB_pbsv_19284:HG3_PB_HySA_28713:HG4_PB_pbsv_19215:HG2_PB_assemblyticsPBcR_15920:HG3_PB_pbsv_18969:HG4_Ill_svaba_23373:HG4_Ill_Krunchall_25676:HG4_Ill_GATKHC_30068:HG4_Ill_GATKHCSBGrefine_12950:HG4_Ill_250bpfermikitraw_24656:HG4_Ill_150bpfermikitraw_23714:HG3_Ill_svaba_23684:HG3_Ill_scalpel_18065:HG3_Ill_Spiral_19278:HG3_Ill_GATKHC_30030:HG3_Ill_GATKHCSBGrefine_12361:HG3_Ill_250bpfermikitraw_24313:HG3_Ill_150bpfermikitraw_23597:HG2_Ill_svaba_23464:HG2_Ill_SpiralSDKrefine_10318:HG2_Ill_Krunchall_25353:HG2_Ill_GATKHC_30124:HG2_Ill_GATKHCSBGrefine_12532:HG2_Ill_250bpfermikitraw_25035:HG2_Ill_150bpfermikitraw_23548:HG2_Ill_breakscan11_4967:HG4_PB_HySA_27657:HG2_PB_PB10Xdip_19067;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23548:HG2_Ill_250bpfermikitraw_25035:HG2_Ill_GATKHCSBGrefine_12532:HG2_Ill_GATKHC_30124:HG2_Ill_Krunchall_25353:HG2_Ill_SpiralSDKrefine_10318:HG2_Ill_svaba_23464:HG3_Ill_150bpfermikitraw_23597:HG3_Ill_250bpfermikitraw_24313:HG3_Ill_GATKHCSBGrefine_12361:HG3_Ill_GATKHC_30030:HG3_Ill_Spiral_19278:HG3_Ill_scalpel_18065:HG3_Ill_svaba_23684:HG4_Ill_150bpfermikitraw_23714:HG4_Ill_250bpfermikitraw_24656:HG4_Ill_GATKHCSBGrefine_12950:HG4_Ill_GATKHC_30068:HG4_Ill_Krunchall_25676:HG4_Ill_svaba_23373;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.333333;PBcalls=7;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=17571;DistForward=1818;DistMin=1818;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=121;REFWIDENED=21:46390975-46391095;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:36:0|1:18:2:4:32:./.:13:0:2:4:0/1:35:13:./.:.:.:.:.:.
chr21	46403857	HG2_PB_SVrefine2Falcon1plusDovetail_7409	T	TCACACCCGCTCCACACACCCCACACTCACATCCCCTCACATACACACCCCTCCACACCCCAACACAACTCACACCCCACATACACCCCTACACACACCCTACACACACACACCCCCACACACACCCCACACACCCACACACCCCACACACCCACACACCCACACACCCCACACCCACACACCCCATACACCCCCATACACCCCCATACACCCCCCACACACACCCCCACACACACCCACACACACCCCACATACACCCCATACCCCCCACACACCCCTCCCCACACCCCACACACACCCCACATACACCCCACACCCCACACACACACCCCACATATACCCCTACACACATCCTACACACACCCCACACACACCCCACACACCCCCATACACCCCCACATACACCCCACATACACACCCCTCCCCACACCCACACACCCCACATACACCCCTACACACACCCCACCCACACACACCCCCATATACCCCCCACACACACCTCACATACACCCCTACACACCCACACACACACCACCCCACACACCCCCACATACACCCCTACAGACACCCTACACACACACACCCCACACACACACCCCACACCCACCCACACACCCCACACACCCACACACCCACACCCACACACCCCTCCCCACACCCCACACACACCCCACACCACCCCACACACCCACACACACCCACACCCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9493:HG2_PB_HySA_34792:HG4_PB_pbsv_19221:HG2_PB_PB10Xdip_19072:HG2_PB_pbsv_19287:HG3_PB_pbsv_18973:HG2_PB_SVrefine2Falcon2Bionano_9547:HG4_PB_SVrefine2PBcRDovetail_9718:HG4_PB_SVrefine2Falcon1Dovetail_12020:HG3_PB_SVrefine2Falcon1Dovetail_12002:HG2_PB_SVrefine2Falcon1plusDovetail_7409:HG2_PB_SVrefine2PB10Xhap12_14095:HG2_PB_SVrefine2PB10Xhap12_14094:HG2_PB_SVrefine2PBcRplusDovetail_6878;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7409;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0806011;ClusterMaxSizeDiff=0.079235;ClusterMaxEditDist=0.267465;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=706;DistBack=-278;DistForward=13;DistMin=-278;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=278;REFWIDENED=21:46403858-46404135;PctSeqSimilarity=0.9554;PctSizeSimilarity=0.9698;PctRecOverlap=0.6324;SizeDiff=-22;StartDistance=-257;EndDistance=-257;GTMatch=1;TruScore=85;MatchId=3384.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:1:20:1:16:./.:97:160:96:136:0/0:14:0:0/1:6:34:.:.:.
chr21	46438672	HG3_PB_SVrefine2Falcon1Dovetail_12005	G	GGGGTGGGGGGGACGGGACGGGGACAGGGAGCGGGTGGGGGCGGGGTGGGGGGGGACGGGGCGGGGTGGGGGGGGACCGGACGGGGACAGGGAGCGGGTGGGGCGGGGACGGGGGGCTCGGGGCC	10	PASS	ClusterIDs=HG4_PB_pbsv_19224:HG2_PB_assemblyticsfalcon_16410:HG2_PB_HySA_34795:HG4_PB_SVrefine2PBcRDovetail_9720:HG2_PB_SVrefine2Falcon1plusDovetail_7411:HG3_PB_SVrefine2PBcRDovetail_9495:HG4_PB_SVrefine2Falcon1Dovetail_12023:HG3_PB_SVrefine2Falcon1Dovetail_12005:HG4_PB_HySA_27664:HG2_PB_PB10Xdip_19074:HG3_PB_HySA_28723:HG2_PB_SVrefine2Falcon2Bionano_9549:HG2_PB_SVrefine2PB10Xhap12_14097:HG2_PB_SVrefine2PBcRplusDovetail_6880:HG2_PB_pbsv_19290:HG3_PB_pbsv_18976;NumClusterSVs=16;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_12005:HG4_PB_SVrefine2Falcon1Dovetail_12023;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0478088;ClusterMaxSizeDiff=0.0237154;ClusterMaxEditDist=0.198413;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=124;DistBack=-1;DistForward=8;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=21:46438667-46438682;PctSeqSimilarity=0.9766;PctSizeSimilarity=0.9538;PctRecOverlap=0.9542;SizeDiff=-6;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=96;MatchId=3385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:0:29:1:21:./.:2:7:0:5:./.:0:8:./.:.:.:.:.:.
chr21	46644417	HG3_PB_SVrefine2Falcon1Dovetail_12009	A	AGCTGTGGGGAGGAACTGGGTTCGGGGAGCCCTGGGCAGGCGGCTGTGGGGAGGAACTGGGTTCGGGGAGCCCTGTCCGGCGGGGGGCTGTGGGGCGGGGAGCTGGGTTCGGGGAGCCCTGGGCGGGTGGCTGTTGGGGGAACTGGGTTCGGGGAGCCCTGGGCGGGGTGGCTTTTGGGGGGAACTGGGTTCGGGGAGCCCTGGGCGGGGTGGCTGTTGGGGGAGCTGGGTTCGGGGAGCCCTGGGCGGGGTGGCTGTTGGGGGAGCTGGGTTCGGGGAGCCCTGGGCGGGGCGGCTGTTGGGGGGAACTGGGTTCGGGGAGCCCTGGGTGGGGCGGCTGTGGGGAGGAACTGGTTTCGGGGAGCCCTGGGCGGGGGGGTGTAGGGGGGCTGTGGGGGGAACTGGTTTCGGGGAGCTCTGGGCGGGGCGGTTGTTGGGGGGAACTGGGTTCGGGAGCCCTGGGCGGGGTGGCTTTTGGGGGAACTGGGTTCGGGGAGCCCTGGGCGGGGTGGCTTTTGGGGGAACTGGGTTCGGGGAGCCCTGGGCGGGGTGGCTTTTGGGGGGAACTGGGTTCGGGGAGCCCTGGGCGGGGCGGCTGTTGGGGGGAGCTGGGTTCGGGGAGCCCTGGGTGGGGCGGCTGTGGGGGAGAGCTGGTTTCGGGGAGCCCTGGGCGGGGCGGCTGTGGGAGGAACTGGGTTCGGGGAGCCCTGGGCGGGGTGGCTGTTGGGGGGAGCTGGGTTCGGGGAGCCCTGGGCGGGGTGGCTGTTGGGGGGAGCTGGGTTCGGGGAGCCCTGGGCGGGGTGGCTGTTGGGGGGAGCTGGGTTCGGGGAGCCCTGGGCGGGGTGGCTGTTGGGGGGAGCTGGGTTCGGGGAGCCCTGGGCAGGGGGGTGTAGGGGGGCGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9498:HG3_PB_HySA_28733:HG2_PB_pbsv_19294:HG2_PB_HySA_34804:HG2_PB_HySA_34803:HG2_PB_PB10Xdip_19076:HG4_PB_HySA_27672:HG3_PB_SVrefine2Falcon1Dovetail_12009:HG2_PB_SVrefine2Falcon1plusDovetail_7414:HG2_PB_SVrefine2Falcon2Bionano_9552:HG2_PB_SVrefine2PB10Xhap12_14100:HG2_PB_SVrefine2PBcRplusDovetail_6883:HG4_PB_SVrefine2PBcRDovetail_9723:HG4_PB_SVrefine2Falcon1Dovetail_12027;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_12009;NumExactMatchSVs=1;ClusterMaxShiftDist=0.181635;ClusterMaxSizeDiff=0.181635;ClusterMaxEditDist=0.240086;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=900;DistBack=-241;DistForward=5;DistMin=-241;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=240;REFWIDENED=21:46644418-46644657;PctSeqSimilarity=0.9291;PctSizeSimilarity=0.8671;PctRecOverlap=0.8672;SizeDiff=-138;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=88;MatchId=3387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:11:0:5:./.:2:10:4:20:1/1:1:11:0/1:11:46:.:976:.
chr21	46744330	HG2_PB_SVrefine2PB10Xhap12_14102	A	AGGGGAGTGGGAGGGAGGTGAGGGGGTGGGGGTGGGAGGGAGGTGAGGGGGTGGGGATGGGAGGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGTGGGGGCAGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCAGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCAGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGTGGGGGTGGAGGGAGGTGAGGGGGTGGGGGTGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGTGGGGGTGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCAGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGGTGGGGTGGGAGGGAGGTGAGGGGGTGGGGGTGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCAGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGTGGGGGTGGGAGGGAGGTGAGGGGGTGGGGTGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCAGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGTGGGGGTGGGAGGGAGGTGAGGGGGTGGGGGTGGGAGGGAGGTGAGGGGGTGAGAGGGAGGTGAGAGGGTGGGGGCGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGGTGGGGGTGGGAGGGAGGTGAGGGGGTGAGAGGAGTGAGGGGGTGGGGTGGGAGGGAGGTGAGGGGGGTGAGGGAGGTGAGGGGGTGGGGTGGGAGGGAGGTGAGGGGTGGGGGGGGAGGGAGGTGAGGGGGGTGAGAGGGAGGTGAGGGGTGGTGGGGGAGGAGGTGAGGGGGTGAGAGGAGGTGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7416:HG2_PB_HySA_34808:HG2_PB_pbsv_19296:HG2_PB_assemblyticsPBcR_15933:HG2_PB_HySA_34807:HG2_PB_SVrefine2PB10Xhap12_14103:HG2_PB_SVrefine2PBcRplusDovetail_6885:HG3_PB_SVrefine2Falcon1Dovetail_12011:HG4_PB_SVrefine2Falcon1Dovetail_12028:HG2_PB_SVrefine2Falcon2Bionano_9554:HG2_PB_SVrefine2PB10Xhap12_14102:HG2_PB_assemblyticsfalcon_16418;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14102;NumExactMatchSVs=1;ClusterMaxShiftDist=0.170732;ClusterMaxSizeDiff=0.167368;ClusterMaxEditDist=0.225779;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1263;DistBack=14273;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=26;REFWIDENED=21:46744331-46744356;PctSeqSimilarity=0.9879;PctSizeSimilarity=0.9768;PctRecOverlap=0.9768;SizeDiff=-30;StartDistance=-5;EndDistance=-5;GTMatch=1;TruScore=98;MatchId=3389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:0:19:0:12:./.:0:4:0:6:1/1:0:10:0/1:12:31:.:.:.
chr21	46808883	HG2_PB_assemblyticsPBcR_15941	C	CACTCTCGGACTCTAATAAACAAGTGAGTCCTCCACTGAGCACGGCCACTCCTGTAGGCTCACCCCACTGGA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_19088:HG3_PB_HySA_28746:HG3_PB_HySA_28745:HG2_PB_assemblyticsfalcon_16425:HG2_PB_assemblyticsPBcR_15941:HG2_PB_pbsv_19305:HG3_PB_pbsv_18991;NumClusterSVs=7;ExactMatchIDs=HG2_PB_assemblyticsPBcR_15941:HG2_PB_assemblyticsfalcon_16425;NumExactMatchSVs=2;ClusterMaxShiftDist=0.165605;ClusterMaxSizeDiff=0.165605;ClusterMaxEditDist=0.275;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=71;DistBack=7;DistForward=4763;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=266;REFWIDENED=21:46808757-46809022;PctSeqSimilarity=0.9855;PctSizeSimilarity=0.9467;PctRecOverlap=0.12;SizeDiff=-4;StartDistance=64;EndDistance=64;GTMatch=0;TruScore=68;MatchId=3390.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:48:0|1:22:4:1:38:./.:7:2:5:0:0/1:27:3:./.:.:.:.:.:.
chr21	46825202	HG3_Ill_svaba_23710	G	GCTGCGGGGCTGCGGGGGTCCCGGGGGTCCCGGGGGTCGGCTGGGTCCTGCGGGGGTC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4970:HG2_PB_HySA_34817:HG3_PB_pbsv_18994:HG2_PB_pbsv_19307:HG4_PB_pbsv_19239:HG4_Ill_svaba_23390:HG4_Ill_manta_4316:HG4_Ill_Krunchall_25689:HG4_Ill_GATKHC_30085:HG4_Ill_GATKHCSBGrefine_12956:HG4_Ill_250bpfermikitraw_24672:HG4_Ill_150bpfermikitraw_23726:HG3_Ill_svaba_23710:HG3_Ill_manta_4138:HG3_Ill_Spiral_19287:HG3_Ill_GATKHC_30053:HG3_Ill_GATKHCSBGrefine_12369:HG3_Ill_250bpfermikitraw_24332:HG3_Ill_150bpfermikitraw_23610:HG2_PB_assemblyticsPBcR_15944:HG2_Ill_svaba_23482:HG2_Ill_scalpel_17727:HG2_Ill_manta_5098:HG2_Ill_SpiralSDKrefine_10330:HG2_Ill_Krunchall_25365:HG2_Ill_GATKHC_30141:HG2_Ill_GATKHCSBGrefine_12538:HG2_Ill_250bpfermikitraw_25050:HG2_Ill_150bpfermikitraw_23560:HG2_PB_PB10Xdip_19089;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23560:HG2_Ill_250bpfermikitraw_25050:HG2_Ill_GATKHCSBGrefine_12538:HG2_Ill_GATKHC_30141:HG2_Ill_Krunchall_25365:HG2_Ill_SpiralSDKrefine_10330:HG2_Ill_manta_5098:HG2_Ill_scalpel_17727:HG2_Ill_svaba_23482:HG2_PB_assemblyticsPBcR_15944:HG3_Ill_150bpfermikitraw_23610:HG3_Ill_250bpfermikitraw_24332:HG3_Ill_GATKHCSBGrefine_12369:HG3_Ill_GATKHC_30053:HG3_Ill_Spiral_19287:HG3_Ill_manta_4138:HG3_Ill_svaba_23710:HG4_Ill_150bpfermikitraw_23726:HG4_Ill_250bpfermikitraw_24672:HG4_Ill_GATKHCSBGrefine_12956:HG4_Ill_GATKHC_30085:HG4_Ill_Krunchall_25689:HG4_Ill_manta_4316:HG4_Ill_svaba_23390;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0677966;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.152542;PBcalls=6;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=57;DistBack=167;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=66;REFWIDENED=21:46825203-46825268;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3391.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:61:1/1:4:14:2:17:./.:0:7:0:5:./.:2:33:./.:.:.:.:.:.
chr21	46838578	HG4_Ill_250bpfermikitraw_24674	T	TCTTCCTGGGGTCTCAGGGAAGCGGCACCTCCTCAGGGGCCTCCCAGCCACCTCACGTCA	20	PASS	ClusterIDs=HG3_PB_HySA_28750:HG2_PB_HySA_34819:HG2_PB_PB10Xdip_19090:HG2_PB_assemblyticsPBcR_15946:HG2_PB_assemblyticsfalcon_16433:HG4_PB_HySA_27679:HG4_Ill_Krunchall_25691:HG4_PB_pbsv_19240:HG4_Ill_250bpfermikitraw_24674:HG2_PB_pbsv_19308:HG3_Ill_250bpfermikitraw_24334:HG2_Ill_250bpfermikitraw_25052;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25052:HG3_Ill_250bpfermikitraw_24334:HG4_Ill_250bpfermikitraw_24674:HG4_Ill_Krunchall_25691;NumExactMatchSVs=4;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.283333;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=9617;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=111;REFWIDENED=21:46838570-46838680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:33:./.:4:11:14:19:./.:7:0:3:11:0/1:26:14:./.:.:.:.:.:.
chr21	46851310	HG2_PB_pbsv_19309	G	GGGCAGGCGACCGGGCCGGCCCAGGGTGAGGGGGGCAGCAGGACCCGCGGCCAGGGAGGGCAGGCAGGACCCGGCGCCCAGGAGGGGGGCAAGGCAGGACCCGGCGGCCCAAAGGGAGGGGGGTCAGGCAGGACCCAGCGCGGCTCCATAGGGGAGGGGGCAGGCAAGGACCGGCGGCCCAGGGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7422:HG4_PB_SVrefine2Falcon1Dovetail_12032:HG4_PB_SVrefine2Falcon1Dovetail_12031:HG3_PB_pbsv_18996:HG2_PB_SVrefine2Falcon2Bionano_9558:HG2_PB_pbsv_19309:HG2_PB_SVrefine2PB10Xhap12_14113:HG2_PB_SVrefine2PBcRplusDovetail_6893:HG3_PB_SVrefine2PBcRDovetail_9504;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_19309;NumExactMatchSVs=1;ClusterMaxShiftDist=0.224784;ClusterMaxSizeDiff=0.224784;ClusterMaxEditDist=0.330435;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=185;DistBack=7;DistForward=12;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=181;REFWIDENED=21:46851269-46851449;PctSeqSimilarity=0.9397;PctSizeSimilarity=0.9585;PctRecOverlap=0.5026;SizeDiff=-8;StartDistance=-92;EndDistance=-92;GTMatch=0;TruScore=80;MatchId=3393.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:23:0|1:15:0:1:20:./.:4:0:4:0:0/0:12:0:./.:.:.:.:.:.
chr21	46894612	HG2_PB_SVrefine2PB10Xhap12_14119	A	ACGTGAACATGGACCCACAGCCTCGCTCCTGGGGGCGTGGGCAGGAGACGCCGTGGACGTGGACCCACAGCCTCGCTCCTGGGGGCGTGGGCAGGAGACGCCGTGGACGTGGACCCACAGCCTCGCTCCTGGGGGCGTGGGCAGGAGACGCCGTGGACGTGGACCCACAGCCTCGCTCCTGGGGGCGTGGGCAGGAGACGCCGTGGACGTGGACCCACAGCCTCGCTCCTGGGGGCGTGGGCAGGAGACGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7428:HG2_PB_HySA_34830:HG2_PB_PB10Xdip_19098:HG3_PB_HySA_28758:HG2_PB_pbsv_19317:HG2_PB_SVrefine2PBcRplusDovetail_6897:HG2_PB_SVrefine2PB10Xhap12_14119:HG2_PB_SVrefine2Falcon2Bionano_9562:HG4_PB_SVrefine2PBcRDovetail_9726;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9562:HG2_PB_SVrefine2PB10Xhap12_14119:HG2_PB_SVrefine2PBcRplusDovetail_6897;NumExactMatchSVs=3;ClusterMaxShiftDist=0.035503;ClusterMaxSizeDiff=0.035503;ClusterMaxEditDist=0.10609;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=250;DistBack=3601;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=105;REFWIDENED=21:46894613-46894717;PctSeqSimilarity=0.9955;PctSizeSimilarity=1;PctRecOverlap=0.6733;SizeDiff=0;StartDistance=-82;EndDistance=-82;GTMatch=0;TruScore=88;MatchId=3394.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:0:30:1:22:./.:1:5:0:5:./.:0:6:./.:.:.:.:.:.
chr21	46950926	HG2_PB_SVrefine2PB10Xhap12_14124	G	GCCACGGGGCAGGGGGAGGTAGCGGGAGCTTCTGAGGAAAGGTATCCACGGGGCAGGGGGCGGGGACGGGGAGCCTCCGGGGAAGGATCCACGGGGCAGGGGGAGGTGGCAGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGCGGGGAGGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGCGGGGAGGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGAGGTGGCGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGAGGTGGCGGGGAGCCTCCTGGGGAAGGATCCACGGGGCAGGGGGAGGTGGCGGGGAGCCTCCTGGGGAAGGATCCACGGGGCAGGGGGAGGTGGCGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGAGGTGGCGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGAGGTGGCGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGAGGTGGCGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGCGGGGAGGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGCGGGGAGGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGAGGTGGCGGGGAGCCTCCGGGGGAAGGAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7434:HG2_PB_HySA_34846:HG2_PB_PB10Xdip_19108:HG4_PB_pbsv_19262:HG2_PB_SVrefine2PBcRplusDovetail_6900:HG2_PB_SVrefine2PB10Xhap12_14124:HG4_PB_SVrefine2Falcon1Dovetail_12043:HG2_PB_SVrefine2Falcon2Bionano_9569;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14124:HG2_PB_SVrefine2PBcRplusDovetail_6900;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0656763;ClusterMaxSizeDiff=0.0641126;ClusterMaxEditDist=0.175241;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=659;DistBack=-1;DistForward=39;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=360;REFWIDENED=21:46950927-46951286;PctSeqSimilarity=0.9883;PctSizeSimilarity=0.9985;PctRecOverlap=0.7005;SizeDiff=-1;StartDistance=-197;EndDistance=-197;GTMatch=0;TruScore=89;MatchId=3395.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:0/1:14:38:1/1:3:13:3:12:./.:0:0:0:0:./.:0:0:./.:1:16:.:1549:.
chr21	47026017	HG2_PB_SVrefine2PBcRplusDovetail_6902	C	CTCGCCTGCAGTATTCAGTGCAGTCACACGCTGCACGGGCGTTTGGCTACACAAATGCCACCACGTTACAGTCGCCTGCAGTATTCAGTGCAGTCACATGCTGCACGGGCGTTTCGCTACACAAATGCCACCGCGTTACAG	10	PASS	ClusterIDs=HG2_PB_HySA_34847:HG2_PB_SVrefine2Falcon1plusDovetail_7436:HG2_PB_assemblyticsfalcon_16450:HG2_PB_assemblyticsPBcR_15955:HG4_PB_HySA_27696:HG4_PB_HySA_27695:HG3_PB_SVrefine2Falcon1Dovetail_12028:HG2_PB_pbsv_19330:HG4_PB_SVrefine2PBcRDovetail_9734:HG4_PB_pbsv_19265:HG2_PB_SVrefine2PBcRplusDovetail_6902:HG2_PB_SVrefine2PB10Xhap12_14127;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14127:HG2_PB_SVrefine2PBcRplusDovetail_6902:HG4_PB_SVrefine2PBcRDovetail_9734;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0979021;ClusterMaxSizeDiff=0.0979021;ClusterMaxEditDist=0.353741;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=140;DistBack=-460;DistForward=-1;DistMin=-460;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1094;REFWIDENED=21:47025995-47027088;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3398.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:47:0|1:17:4:0:28:0|1:13:0:1:21:0/1:31:16:./.:.:.:.:.:.
chr21	47159255	HG2_PB_assemblyticsPBcR_15959	A	ATCAGCCCACCCCTTCCTGTCCATGGTCCTCTGGGTAGCCCCCCCATCTTC	10	PASS	ClusterIDs=HG3_PB_HySA_28777:HG4_PB_HySA_27706:HG4_PB_pbsv_19270:HG2_PB_PB10Xdip_19123:HG2_PB_HySA_34853:HG2_PB_assemblyticsfalcon_16453:HG2_PB_assemblyticsPBcR_15959;NumClusterSVs=7;ExactMatchIDs=HG2_PB_assemblyticsPBcR_15959:HG2_PB_assemblyticsfalcon_16453;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0961538;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.224299;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=50;DistBack=3;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1131;REFWIDENED=21:47158598-47159678;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3400.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:1:5:1:29:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr21	47217508	HG2_PB_SVrefine2Falcon2Bionano_9574	A	ATGAATGCATGGATGGATGAATGCATGAATCCACAGAGAGTGAATGCATGGATGGATAAGTGCATGGATCCATAGGGAGAGTGAATGCATAGATGGACGAGTGCATGGATCCACAGAGAGTGAATGCATGGATGGACGAGTGCGTGGATCCATAGAGAGAGTGAATGCGTGGATAGACTGGATAGATGAGTGCATGGATCCATAGAGAGAGTGAATGCATGGATAGACCAGTGCATGGATCCATAGAGAGAGTGAATGCATGGATGGACGAGTGCATGGATCCATAGAGTGAATGCATGGATGGACAAGTGCACAGATCCATAGAGGGAGTGAGTGCATGGATGGACGAATGCATGGATCCATAGGGAGAGTGAATGCATTGATAGATGAGTGCATGGATCCATAGAGTGAATGCATGGATGGACAAGTGCACAGATCCATAGAGGGAGTGAGTGCATGGATGGACGAATGCATGGATCCATAGGGAGAGTGAATGCATTGATAGACGAGTGCATGGATCCATAGAGTGAATGCATGGATGGACAAGTGCATGGATCCATACAGAGTGAATGCATGGATGGACGAGTGCATGGATCCATAGAGAGAGTGAATGCATGGATGGACGAGTGCATGGATCTGTAGAGAGAATGAATGCATGGATGGACGAGTTCATGGGTCCATAGAGTGAATGCTTGAATGGACAAGTGCATGGATCCATAGAGAGAGTGAATGCATGGATGGACGAGTGCATGGATCCGTAGACAGAGCGAATGCACGGATGGACAGATGCATGGATCCATAGAGTGATTGTGTGCATGGATGGATGAATGCATGGATGGATGAATGCATGAATCCACAGAGAGTGAATGCATGGATGGATGAGTGCATGGATCCATAGAGAGAGTGAATACATGGATAGACTGGATAGACGAGTGCATGGATCTACAGAGAGTGAATGCATGGATGGACGAGTGCATGGATCTGTAGAGAGAGTGAATGCATGGATGGATGAGTGCATGGATCCATAGAGTGAGTGCATGGATGGACGAGTGCACAGATCCATAGAGAGAGTGAATGCATGGATGGACGAGTGCATGGATCCATAGAGAGAGTGAATGCATTGATAGACGAGTGCATGGATCCGTAGAGAGAGTGAATGCATGGATGGACGAGTGCATGGATCCATAGAGTGAATACATGGATGGACGAGTGCATGGATCCATAGACAGAGTGAATGCATGGATGGACGAGTGCATGGATCTGTGGAGAGAGTGAATGCATGGATGGACAAGTTCATGGGTCCATAGAGTGAATGCTTGAATGGACGAGTGCATGGATCCATAGAGAGAGTGAATGCATGGATAGATGAGTGCAAGGATCCATAGAGAGAGTGGATGCATGGATAGATGAGTGCATGGATCCATAGAGACTGAATGCATGGATGGACAGATGCATGGATCCATAGAGAGAGTGATTGTGTGCATGAATGGATGAATGCATGGATGGATGAATGCATGAATCCACAGAGAGTGAATGCATGGATGGATGAGTGCATGGATCCACAGAGAGTAAATGCATGGATAGACGAGTGCATGGATCCATAGAGACTGAATGTGTGGATGGACAGATGCATGGATCCATAGAGAGAGTGATTGTGTGCATGGATGGATGAATGCATGAGTCCACAGAGAGTGAATGCATGGATGGATGAGTGCATGGATCCATAGAGAGAGTGAATGCATGGATAGACTGGATAGACGAGTGCATGGATCCACAGAGAGTGAATGCATGGATGGATGAGTGCATGAATCTGTAGAGAGAATTAATGCATGGATGGATGAGAGCATGGATCCATAGAGAGTGAATGCATGGATGGACGAGTGCATGGATTCATAGAGAGAGTGAATGCATGGATAGACTGGATAGACAAGCGCATGGATCCGTAGAGAGAGTGAATGCATGGATGGACGAGTGCATGGATCCGTAGAGAGAGCGAATGCATGGATGGATGAGTGCATGGATCCATAGAGAGTGAATGCATGGATGGACGAGTGCATGGATCCATAGAGAGAGTGAATGCATGGATAGACTGGATAGACAAGTGCATGGATCTGTAGAGAGAGTGAATGCATGGATGGGCGAGTGCACGGATCCATAGAGTGAATGCATGGATGGACGAGTCATAGAGAGAATGAATGCATGCATGGAGGAATGCATGGATCTGTAGAGAGTGAATGCATACATGGATGAATGCATGGATCCATAGAGTGAATGCATGGATGGACGAGTGCATGGATCCATAGACAGAGTGAATGCATGGATGGACGAGTGCATGGATCCTTAGAGAGAGTGAATGCATGGATGGCCAGATGCATGTATCCATAGAGAGTGAATGCATGGATGGACGAATGCATGGATCCATCAACAGAGTGTACGGATGGATGAATGCATGGATCAATAGAGAGAGTGAATGTGTGAATGGATGAATGCATAGATTCATAGAGAGAATGAATGCATGCATGGAGGAATGCATGGATCTGTAGAGAGAGTGAATGCGTACATGGATGAATGCATGGATCCGTAGAGTGAATGTGTGAATGGATGAATGCATAGATTCATAGAGAGAATGAATGCATGCATGGAGGAATGCATGGATCTGTAGAGAGTGAATGCATACATGGATGAATGCATGGATCCATAGAGTGAATGCATGGATGGACGAGTGCATGGATCCATAGAGAGTGAATGCATGGATGGATGAGTGCATGGATCCATAGAGAGAGTGAATGCATGGATGGACGAGTGCATGGATCCATAGAGAGAGTGAATGCATTGATAGACGAGTGCATGGATCCGTAGAGAGAGTGAATGCATGGATGGATGACTGCATGGATCCATAGAGACTGAATGCATGGATGGACGAGTGCATGGATCCTTAGAGAGAGTGAATGCATGGATGGACAGATGCATGTATCCATAGAGAGTGAATGCAGGTATGGACAAATGCATGGATCCATCAACAGAGTGTATGGATGGATGAATGCATGGATCCATAGAGAGAGTGAATGGATGCATACATGGATGAATGCATGGATCTGTAGAGAGAG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13496:HG2_PB_PB10Xdip_19125:HG2_PB_HySA_34857:HG2_Ill_breakscan11_4971:HG3_PB_SVrefine2Falcon1Dovetail_12033:HG4_PB_SVrefine2Falcon1Dovetail_12051:HG2_PB_SVrefine2Falcon1plusDovetail_7441:HG2_PB_SVrefine2PBcRplusDovetail_6907:HG2_PB_SVrefine2PB10Xhap12_14133:HG2_PB_SVrefine2Falcon2Bionano_9574:HG3_PB_SVrefine2PBcRDovetail_9517;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9574:HG2_PB_SVrefine2PB10Xhap12_14133:HG2_PB_SVrefine2PBcRplusDovetail_6907;NumExactMatchSVs=3;ClusterMaxShiftDist=0.132518;ClusterMaxSizeDiff=0.132518;ClusterMaxEditDist=0.154944;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=3106;DistBack=96;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1562;REFWIDENED=21:47217509-47219070;PctSeqSimilarity=0.9954;PctSizeSimilarity=0.9962;PctRecOverlap=0.9522;SizeDiff=-12;StartDistance=-143;EndDistance=-143;GTMatch=0;TruScore=98;MatchId=3401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:75:./.:0:0:0:1:./.:0:0:0:0:./.:0:2:1/1:2:292:.:3356:.
chr21	47313491	HG3_Ill_GATKHCSBGrefine_12376	G	GGGGAGGAGGTGGGGGCCCCGGGTACAGACGGGGGGCAGGGGGAGGCAGGAGGGGACCCTGGGTATAGACAGGAA	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_19126:HG3_PB_pbsv_19030:HG4_PB_pbsv_19276:HG2_PB_HySA_34869:HG4_PB_HySA_27714:HG4_Ill_svaba_23413:HG4_Ill_manta_4318:HG4_Ill_Krunchall_25701:HG4_Ill_GATKHC_30106:HG4_Ill_GATKHCSBGrefine_12970:HG4_Ill_Cortex_2193:HG4_Ill_250bpfermikitraw_24689:HG3_Ill_svaba_23731:HG3_Ill_scalpel_18095:HG3_Ill_manta_4140:HG3_Ill_Spiral_19294:HG3_Ill_Krunchall_24905:HG3_Ill_GATKHC_30088:HG3_Ill_GATKHCSBGrefine_12376:HG3_Ill_Cortex_2231:HG3_Ill_250bpfermikitraw_24346:HG3_Ill_150bpfermikitraw_23622:HG2_PB_assemblyticsfalcon_16466:HG2_PB_assemblyticsPBcR_15969:HG2_Ill_svaba_23502:HG2_Ill_scalpel_17742:HG2_Ill_manta_5103:HG2_Ill_SpiralSDKrefine_10341:HG2_Ill_Krunchall_25377:HG2_Ill_GATKHC_30170:HG2_Ill_GATKHCSBGrefine_12547:HG2_Ill_Cortex_5212:HG2_Ill_250bpfermikitraw_25069:HG2_Ill_150bpfermikitraw_23578;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23578:HG2_Ill_250bpfermikitraw_25069:HG2_Ill_Cortex_5212:HG2_Ill_GATKHCSBGrefine_12547:HG2_Ill_GATKHC_30170:HG2_Ill_Krunchall_25377:HG2_Ill_SpiralSDKrefine_10341:HG2_Ill_manta_5103:HG2_Ill_scalpel_17742:HG2_Ill_svaba_23502:HG2_PB_assemblyticsPBcR_15969:HG2_PB_assemblyticsfalcon_16466:HG3_Ill_150bpfermikitraw_23622:HG3_Ill_250bpfermikitraw_24346:HG3_Ill_Cortex_2231:HG3_Ill_GATKHCSBGrefine_12376:HG3_Ill_GATKHC_30088:HG3_Ill_Krunchall_24905:HG3_Ill_Spiral_19294:HG3_Ill_manta_4140:HG3_Ill_scalpel_18095:HG3_Ill_svaba_23731:HG4_Ill_250bpfermikitraw_24689:HG4_Ill_Cortex_2193:HG4_Ill_GATKHCSBGrefine_12970:HG4_Ill_GATKHC_30106:HG4_Ill_Krunchall_25701:HG4_Ill_manta_4318:HG4_Ill_svaba_23413;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0526316;ClusterMaxEditDist=0.171053;PBcalls=7;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=27;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=36;REFWIDENED=21:47313492-47313527;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3403.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:45:./.:0:1:1:1:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr21	47347185	HG2_PB_SVrefine2PB10Xhap12_14139	C	CCTCCTCTCCCTCCCTCTCCCCCTCCTCCCTCCCCTCCCCTTCCTCCCTCTCCCCCTACATCCTCCCCTCCTGCCCTCCTCTCCTTCACTCTGCCTCCTCCCTCCCCTCCTCTCCTCTCCCTCCCTCTCCCCCTCCTCCCTCCTCTCTCCTCTCCCTCCCTCCCTCTCCCCCTACTTCCTCCCCTCCTGCCCTCCTCTCCCTCCCCTCCTGTCCCTCCCTCCCCTCCTGTCCCTCCCTCCCCTCCTGTCCCTCCCTCCCCTCCTGCCTTCCTCTTCCTCCCTCTCCCTCCCTCTCCCCCTCCTCCCTCCTCTCCTCTCTCCCCTCCCTCCCTCTCCCCCTCCTCCCTCCTCTCCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12040:HG4_PB_assemblyticsfalcon_16179:HG3_PB_pbsv_19038:HG3_PB_HySA_28787:HG4_PB_HySA_27724:HG4_PB_SVrefine2Falcon1Dovetail_12058:HG2_PB_HySA_34882:HG2_PB_PB10Xdip_19135:HG4_PB_pbsv_19285:HG3_PB_SVrefine2PBcRDovetail_9522:HG2_PB_pbsv_19343:HG4_PB_SVrefine2PBcRDovetail_9741:HG2_PB_SVrefine2Falcon1plusDovetail_7450:HG2_PB_SVrefine2Falcon2Bionano_9579:HG2_PB_SVrefine2PBcRplusDovetail_6913:HG2_PB_SVrefine2PB10Xhap12_14139;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14139:HG2_PB_SVrefine2PBcRplusDovetail_6913;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0812325;ClusterMaxSizeDiff=0.0784314;ClusterMaxEditDist=0.247934;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=354;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=83;REFWIDENED=21:47347186-47347268;PctSeqSimilarity=0.9833;PctSizeSimilarity=0.9806;PctRecOverlap=0.8255;SizeDiff=-7;StartDistance=-60;EndDistance=-60;GTMatch=0;TruScore=92;MatchId=3404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:./.:0:2:0:26:./.:0:1:0:3:./.:0:7:1/1:1:22:.:2835:.
chr21	47474718	HG2_PB_SVrefine2PBcRplusDovetail_6925	T	TTGCCCCGCACAGCCTCCTGCCTCCCTCTGCCCCGCACAGCCCCCCTCCCTCTGCCCTGCATAGACCCTGCCTCCCTCTGCCCTGCACAGCCCCTCCCTCCCTCCCCCCCACAGCCCCCCTCCCTCCCTCTGCCCCGCACAGCCCCCTCCCTCCCTCGCCCTGCATAGACCTCCCTCCCTCTGCCCCGCATAGACCCTGCCTCCCTCTGCCCTGCACAGCCCCCCCCTCCCTCTGCCCCGCATAGACCCTGCCTCCTCTGCCCTGCACAGCCCCCTCCCTCCTCTGCCCTGCACAGCCCCCTCCCTCCCTCTGCCCTGCATAGACCCTCCCTCCCTCTGCCCTGCACAGCCCCTCCCTCCTCCGCTCACACAGGCCCCCTCCCTCCCTCCGCCCCGCACAGCCCCCTCCCTCCCTCTGCCCCGCATAGGCCCCTCCCACCTCTGCCCCGCACAGCCCCCTCCCTCCCTCTGCCCTGCATAGACCCTCCCTCCCTCTGCCCTGCACAGCCCCTCCCTCCCTCCGCCTCACACAGGCCCCCTCCCTCCCTCCGCCCCGCACAGCCCCCTCCCTCCCTCTGCCCCGCATAGGCCCCCTCCCACCCTCTGCCCCACGCAGCCCCCTCCCACCGCTCTGCCCCGCATAGACCCTGCCTCCCTCTGCCCTGCACAGCCCCTCCTCCCTCCGCCCCGCACAGCCCCCCTCCCTCCCTCTGCCCCGCACAGCCCCCTCCCTCCCTCTGCCCTGCATAGACCCTCCTCCCTCTGCCCCGCATAGACCCTGCCTCCCTCTGCCCTGCACAGCCCCCTCCCTCCCTCTGCCCCGCATAGACCCTGCCTCCCTCTGCCCTGCACAGCCCCCTCCCTCCCTCTGCCCTGCACAGCCCCCTCCCTCCCTCTGCCCTGCATAGACCCTCCCTCCCTCTGCCCTGCACAGCCCCTCCCTCCCTCCGCCTCACACAGGCCCCCTCCCTCCCTCCGCCCCGCACAGCCCCCTCCCTCCCTCTGCCCCGCATAGGCCCCCTCCCACCCTCTGCCCCGCACAGCCCCCTCCCTCCTCTGCCCTGCATAGACCCTCCCTCCCTCTGCCCTGCACAGCCCTCCCTCCCTCCGCCTCACACAGGCCCCCTCCCTCCCTCCGCCCCGCACAGCCCCTCCCTCCCTCTGCCCCGCATAGGCCCCCTCCCACCCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6925:HG3_PB_pbsv_19052:HG3_PB_assemblyticsfalcon_16425:HG3_PB_SVrefine2Falcon1Dovetail_12054:HG2_PB_HySA_34911:HG2_PB_pbsv_19363:HG2_PB_SVrefine2PB10Xhap12_14155:HG2_PB_SVrefine2Falcon2Bionano_9589:HG4_PB_SVrefine2Falcon1Dovetail_12066:HG3_PB_SVrefine2Falcon1Dovetail_12053:HG2_PB_SVrefine2Falcon1plusDovetail_7464;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6925;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0760034;ClusterMaxSizeDiff=0.0734415;ClusterMaxEditDist=0.259516;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1189;DistBack=1620;DistForward=118;DistMin=118;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=310;REFWIDENED=21:47474719-47475028;PctSeqSimilarity=0.9789;PctSizeSimilarity=0.9843;PctRecOverlap=0.8462;SizeDiff=-19;StartDistance=-176;EndDistance=-176;GTMatch=1;TruScore=93;MatchId=3405.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:88:1/1:2:29:0:11:./.:7:3:14:7:0/0:14:0:0/1:11:32:.:7598:.
chr21	47510633	HG2_PB_SVrefine2PBcRplusDovetail_6928	A	ATGGTGATGATGATGGCAATGGTGATAATGGTGATGGGGTGATGGTGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTTGTGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTAGTAGTGGTGGTGGTGGTGATGGTGGTGGTGATGTGGCCATGGTGATGGTGTTGGTGGCGGTGGTGATGGTGGTGATGGTGATGATGATGATGGTGATGATGGTGGTGGTGATGGTGAAGGTGGTGATGGTGGTGGTAGTAGTGGTCATGGTGGTGATGGTGATGATGGTGGTAGTAGTGGTGATGGTGGTGATGATGGTGATGATAGTGGTGATGATGGTGATGTTAATGGTGATGGTGGTGATGGTGATGGTGGTGATGGTGGTGGTTGTGGTGGTGATGATGGTGGTGATGATGGTGGTGGTGATGATGGTGATGATAATGGTGATGGTGGTAACAGTGGTGGTGCTGATGGTGATGATAATGGTGATGGTGGTGATGGTGGTGATGGTGATGATGGTGGTGGTGGTGATGGTGGTGATGGTGATGATGGTGGTGATGGTGATGGTGGTGATGGTGGTGATGGTGGTGGTGGTGATGGTGGTGGTTGTGGTGGTGATGATGGTGATGGTGGTGATGGTGGTTGTGGTGGTGATGATGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9592:HG3_PB_SVrefine2Falcon1Dovetail_12057:HG4_PB_SVrefine2Falcon1Dovetail_12068:HG2_PB_SVrefine2Falcon1plusDovetail_7467:HG3_PB_SVrefine2PBcRDovetail_9531:HG2_PB_SVrefine2PBcRplusDovetail_6928:HG2_PB_SVrefine2PB10Xhap12_14158;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9592:HG3_PB_SVrefine2PBcRDovetail_9531:HG2_PB_SVrefine2PBcRplusDovetail_6928:HG2_PB_SVrefine2PB10Xhap12_14158;NumExactMatchSVs=4;ClusterMaxShiftDist=0.011065;ClusterMaxSizeDiff=0.011065;ClusterMaxEditDist=0.0194175;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=726;DistBack=4;DistForward=22;DistMin=4;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=83;REFWIDENED=21:47510634-47510716;PctSeqSimilarity=0.941;PctSizeSimilarity=0.9463;PctRecOverlap=0.663;SizeDiff=39;StartDistance=-225;EndDistance=-225;GTMatch=0;TruScore=85;MatchId=3408.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:0:16:0:8:./.:0:70:5:86:./.:0:6:1/1:1:173:.:7598:.
chr21	47540039	HG4_Ill_GATKHC_30133	C	CCCCACTGAGGTACCGCTCACCCCCCAGCCCCCACTGAGGCACCGCTCACACCCCCGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6931:HG2_Ill_breakscan11_4975:HG4_PB_pbsv_19313:HG4_Ill_svaba_23437:HG4_Ill_GATKHC_30133:HG4_Ill_GATKHCSBGrefine_12986:HG2_Ill_svaba_23526:HG2_Ill_GATKHC_30199:HG2_Ill_GATKHCSBGrefine_12560:HG2_PB_HySA_34917:HG2_PB_pbsv_19372:HG4_Ill_SVrefine2DISCOVARDovetail_13342;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12560:HG2_Ill_GATKHC_30199:HG2_Ill_svaba_23526:HG4_Ill_GATKHCSBGrefine_12986:HG4_Ill_GATKHC_30133:HG4_Ill_svaba_23437;NumExactMatchSVs=6;ClusterMaxShiftDist=0.118644;ClusterMaxSizeDiff=0.0854701;ClusterMaxEditDist=0.237288;PBcalls=4;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=57;DistBack=4;DistForward=44;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=77;REFWIDENED=21:47540009-47540085;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:./.:3:5:5:2:./.:5:3:2:13:0/1:22:6:./.:.:.:.:7598:.
chr21	47564275	HG3_PB_SVrefine2PBcRDovetail_9535	A	ACCTCTCTCCCCTCTCTCCCTCTCTCTCCCTCCCTCTCTCTCCACCTACCTCTCTCCCCCTCCCTCCCTCCCCTCTTTCCCCTCTCCCTCTCTCCCTCTCTCTCCCCCCTCTCCCCCCCCCTTTCCCCCCTCTCCCTCCCCTCTCTCCCCCTCTCCCTCCCCTTTCCCCCCTCTCCCTCCCTCCCCTCTCTCCCCCCTCTCCCTCCCTCCCCTTCCCCCCTCTCCCTCCCTACCCTCTCTCCCCCTCTCCCTCCCTTCCCCTCATCCCTCCCTCTCCCTCTCCCCTCTCTCTCCCTCCCCCCCTCCCCTCCCCCCTCTCCCTCTCCCCCTCTCTCCCCCTCCCTCTCCCTTCCCCTCCCTCCCTCTCCCTCTCTCCCCCCTCCCCTCTCCCTCTTTCTCCTTCCCGCTCCCTCTCCCCTTTCTCCCTCTCTCTCCCTCCCCCCTTTCTCCTTCCCGCTCCCTCTCTCCCCTTTCTCCTCTCTCTCCCTCCCCCTCCCTCTCTCCCCTCTCTCCATCCTCCCCTCTCTTCCTCCCTGTCTCCCCCTCTCCCCCCCTCCTTCTCTCCCCCCTCTCCCTCTCCCCCCTCCCTCTCTCCCCCTGCCCTCTCCCCCTCCCTCTCTCCCCCTCCCCCTCTTCCCCTCCCTCTCTCCCCCTCCTTCTCCCTCTCTCCCCACCTCCTTCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7469:HG2_PB_pbsv_19378:HG2_PB_SVrefine2PB10Xhap12_14162:HG3_PB_pbsv_19064:HG2_PB_SVrefine2PBcRplusDovetail_6933:HG4_PB_SVrefine2Falcon1Dovetail_12072:HG2_PB_SVrefine2Falcon2Bionano_9595:HG3_PB_SVrefine2PBcRDovetail_9535:HG3_PB_SVrefine2Falcon1Dovetail_12062;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_9535;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0748349;ClusterMaxSizeDiff=0.0732064;ClusterMaxEditDist=0.24766;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=682;DistBack=1896;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=383;REFWIDENED=21:47564276-47564658;PctSeqSimilarity=0.9501;PctSizeSimilarity=0.9394;PctRecOverlap=0.8088;SizeDiff=-44;StartDistance=-117;EndDistance=-117;GTMatch=1;TruScore=89;MatchId=3411.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:38:1/1:1:10:1:7:./.:5:0:2:12:./.:5:0:1/1:2:28:.:7598:.
chr21	47565638	HG2_PB_SVrefine2PB10Xhap12_14163	T	TCCCCACCCCGTGCCCTCCCCCAACAGCGCCCTTCCCCCTCCCCGCCCTCCCAACAGCACCCTCCCCCCAACAACTGCGCCCTCCCCTTCCCCCTCCCCGCCCTCCCCCCAACAGCGCCCTCCCCCCAACAACTGCGCCCTCCCCTTCCCCCTCCCCGCCCTCCCCCCAACAGCGCCTTCCCCCCACCCCGCGCTCCCCCCAACAGCGCCCTCCCCCCAACAGCGCCCTCCCCCCAACAGCGCCCTCCCCCAACAACTGTGCCCTCCCCTTC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12063:HG2_PB_pbsv_19379:HG2_PB_PB10Xdip_19178:HG4_PB_pbsv_19319:HG4_PB_SVrefine2Falcon1Dovetail_12073:HG3_PB_SVrefine2PBcRDovetail_9536:HG2_PB_SVrefine2Falcon1plusDovetail_7470:HG2_PB_SVrefine2Falcon2Bionano_9596:HG2_PB_SVrefine2PBcRplusDovetail_6934:HG2_PB_SVrefine2PB10Xhap12_14163;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14163:HG2_PB_SVrefine2PBcRplusDovetail_6934;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0998081;ClusterMaxSizeDiff=0.0842912;ClusterMaxEditDist=0.180422;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=271;DistBack=16;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=52;REFWIDENED=21:47565639-47565690;PctSeqSimilarity=0.9836;PctSizeSimilarity=0.9891;PctRecOverlap=0.8764;SizeDiff=-3;StartDistance=-32;EndDistance=-32;GTMatch=0;TruScore=94;MatchId=3412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:0:8:0:7:./.:2:3:2:12:./.:3:5:./.:.:.:.:7598:.
chr21	47833056	HG2_PB_assemblyticsPBcR_16005	A	ACCCGGGAGAGGCTGGACACGCGGCAGCAAGGTGTGGGGAGCGGGGAAGGCGCGAGGTCCC	20	PASS	ClusterIDs=HG2_PB_HySA_34935:HG4_PB_HySA_27776:HG4_Ill_GATKHCSBGrefine_12990:HG2_PB_pbsv_19395:HG2_PB_assemblyticsPBcR_16005:HG2_PB_PB10Xdip_19213;NumClusterSVs=6;ExactMatchIDs=HG2_PB_assemblyticsPBcR_16005:HG4_Ill_GATKHCSBGrefine_12990;NumExactMatchSVs=2;ClusterMaxShiftDist=0.126984;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.23622;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=60;DistBack=83;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=414;REFWIDENED=21:47832897-47833310;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3415.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:51:1/1:2:14:1:16:./.:1:1:1:1:./.:3:2:./.:.:.:.:.:.
chr21	47843655	HG2_PB_PB10Xdip_19214	A	GAGGGGAGGAGGAGGAAGAGAAGGGAGGGGGATGAGGAGGGGGAGGGGAGGAGGAAGAGAAGGGGAGGGGGAGGGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12084:HG4_PB_HySA_27777:HG3_PB_pbsv_19081:HG4_PB_pbsv_19338:HG2_PB_PB10Xdip_19214:HG2_PB_HySA_34936:HG2_PB_pbsv_19396;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_19214;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0657895;ClusterMaxSizeDiff=0.0263158;ClusterMaxEditDist=0.264901;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=75;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=168;REFWIDENED=21:47843612-47843779;PctSeqSimilarity=0.9935;PctSizeSimilarity=0.9868;PctRecOverlap=0.974;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:43:1/1:2:19:1:11:./.:0:0:1:3:./.:0:1:./.:.:.:.:.:.
chr22	17705290	HG2_10X_SVrefine210Xhap12_13530	A	AAACAAGTGCTAATAATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCGGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG3_PB_HySA_28878:HG4_PB_pbsv_19352:HG3_PB_pbsv_19101:HG4_PB_assemblyticsfalcon_16233:HG2_PB_PB10Xdip_19331:HG2_PB_pbsv_19416:HG2_Ill_breakscan11_4976:HG4_PB_SVrefine2PBcRDovetail_9767:HG4_PB_SVrefine2Falcon1Dovetail_12089:HG2_PB_SVrefine2Falcon2Bionano_9609:HG4_Ill_SVrefine2DISCOVARDovetail_13361:HG4_Ill_MetaSV_3164:HG4_Ill_GATKHCSBGrefine_12999:HG2_PB_SVrefine2PB10Xhap12_14188:HG2_PB_SVrefine2PBcRplusDovetail_6953:HG2_PB_HySA_34968:HG2_PB_SVrefine2Falcon1plusDovetail_7491:HG3_PB_SVrefine2PBcRDovetail_9553:HG3_Ill_manta_4145:HG3_Ill_SVrefine2DISCOVARDovetail_13566:HG3_Ill_MetaSV_3207:HG3_Ill_GATKHCSBGrefine_12404:HG2_Ill_SVrefine2DISCOVARplusDovetail_7981:HG2_Ill_MetaSV_3049:HG2_Ill_GATKHCSBGrefine_12569:HG2_10X_SVrefine210Xhap12_13530:HG3_PB_SVrefine2Falcon1Dovetail_12081:HG2_Ill_manta_5113:HG4_PB_HySA_27799;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13530:HG2_Ill_GATKHCSBGrefine_12569:HG2_Ill_MetaSV_3049:HG2_Ill_SVrefine2DISCOVARplusDovetail_7981:HG3_Ill_GATKHCSBGrefine_12404:HG3_Ill_MetaSV_3207:HG3_Ill_SVrefine2DISCOVARDovetail_13566:HG3_Ill_manta_4145:HG3_PB_SVrefine2PBcRDovetail_9553;NumExactMatchSVs=9;ClusterMaxShiftDist=0.150376;ClusterMaxSizeDiff=0.150376;ClusterMaxEditDist=0.249624;PBcalls=16;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=324;DistBack=1895;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=22:17705291-17705308;PctSeqSimilarity=0.9863;PctSizeSimilarity=0.973;PctRecOverlap=0.976;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3420.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:1/1:0:11:0:22:1/1:0:10:0:9:1/1:0:20:1/1:3:51:.:.:.
chr22	17850235	HG2_10X_SVrefine210Xhap12_13532	G	GCAGCTGTCCGGGCGGGGGTGGGGCGGGGGCGGGGGTTGTTGTTGTGGCGCGGGCAGCCCCGCCCCCTCCTCGTGGGCGGCCCCTCCCCCAGGCCCCGCGTCCGGCCCCTCCGCCCCTAGCCCCATCTGTTTCTCCGGCGGGGACTCGATTATATTGTAAGGGACTGGGGGCGGCCGCCGCCGCAGCCGCGGGATGGGGCGAGCGCGCGGACCCCGCGGGCAGCCGCAGCCGCAGCCGCCTCAGTAGTTCGGGCCCCCGCGCCGCCGCCCCCCGCCCGGCGCCCGCCCTCGGCTCCTGCACTCGCCGAGCGGCGGCAGCAGCGGGAGGAGCGCCCCGCCGCCCCCGCCGAGGACCGCGCGGAGGCTGCGGCGCTGCCGCGGCGGGAGTCCCAGGTCGGCGGGCAGAGCGCGGGCAGCGAGGGGCCGCCGCCTGTGCCGCAGCGGGGAGATGTGCCCAGAGGAGGGCGGCGCGGCCGGGCTGGGCGAGCTCCGCTCCTGGTGGGAGGTCCCGGCCATCGCGCACTTCTGCTCGCTCTTTCGCACCGCGTTCCGCCTGCCCGACTTCGAGATCGAGGTGAGTGGCCGCGCGGGCGGGAGGCGGCGCGCTGCGCCCCCTGCTTCCCCTGCCCCGCGCGGGGTGTCCCGGGCCGTCGCGCAGAGGGGCCGGGGCCCGAGGGACTTCGGCCGGGAGTCGGGGGCCAGGAGGAGGGCGCAAAAGGGCAGGAGGGCGGGCGGGGGCCGCCGGGCTGTGCCCGGGTGCCGAGGGGCGTCGGGCCGGGGACGCCGGATCCTGGGGTGGAGGAGCAGGCACCGCGAGGGCGGGGCGGGCCCGTGCTTTTGTGGGAGAGGGAGCGGGAGCGGGACCCGGCGACCCTCCCGGGACTTCTCCGGTGGGCTGGGGCTGGGTGTGGGCGCGAGGGCTGCGCGCGCTCGCCGCCCGGTGCCATTGAGGCGCGAGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7492:HG2_PB_pbsv_19418:HG2_PB_PB10Xdip_19334:HG3_PB_pbsv_19103:HG4_Ill_MetaSV_3165:HG3_Ill_MetaSV_3209:HG2_Ill_MetaSV_3051:HG4_PB_pbsv_19354:HG4_PB_assemblyticsfalcon_16235:HG4_Ill_SVrefine2DISCOVARDovetail_13362:HG3_Ill_SVrefine2DISCOVARDovetail_13568:HG3_PB_SVrefine2PBcRDovetail_9555:HG2_PB_SVrefine2Falcon2Bionano_9611:HG4_PB_SVrefine2PBcRDovetail_9768:HG2_PB_SVrefine2PBcRplusDovetail_6955:HG2_PB_SVrefine2PB10Xhap12_14190:HG2_Ill_SVrefine2DISCOVARplusDovetail_7983:HG2_10X_SVrefine210Xhap12_13532:HG3_PB_SVrefine2Falcon1Dovetail_12083:HG4_PB_SVrefine2Falcon1Dovetail_12090;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13532:HG2_Ill_SVrefine2DISCOVARplusDovetail_7983:HG2_PB_SVrefine2PB10Xhap12_14190:HG2_PB_SVrefine2PBcRplusDovetail_6955:HG4_PB_SVrefine2PBcRDovetail_9768;NumExactMatchSVs=5;ClusterMaxShiftDist=0.096875;ClusterMaxSizeDiff=0.096875;ClusterMaxEditDist=0.22561;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=958;DistBack=27952;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=35;REFWIDENED=22:17850236-17850270;PctSeqSimilarity=0.995;PctSizeSimilarity=0.999;PctRecOverlap=0.9677;SizeDiff=-1;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=98;MatchId=3421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:78:1/1:0:27:3:32:1/1:0:8:0:17:1/1:0:16:0/1:22:71:.:.:.
chr22	17863744	HG2_Ill_150bpfermikitraw_23626	G	GATTACAGACATGCACCACCACGTCTGGCTAATTTTCTTTTTTTTGGATTTTTACT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_19335:HG4_PB_pbsv_19355:HG3_PB_pbsv_19104:HG4_PB_assemblyticsfalcon_16236:HG4_PB_SVrefine2PBcRDovetail_9769:HG4_Ill_svaba_23463:HG4_Ill_scalpel_17350:HG4_Ill_manta_4324:HG4_Ill_Krunchall_25738:HG4_Ill_GATKHC_30178:HG4_Ill_GATKHCSBGrefine_13000:HG4_Ill_FB_15905:HG4_Ill_250bpfermikitraw_24732:HG4_Ill_150bpfermikitraw_23785:HG3_PB_SVrefine2Falcon1Dovetail_12084:HG3_Ill_svaba_23794:HG3_Ill_scalpel_18127:HG3_Ill_manta_4146:HG3_Ill_Spiral_19331:HG3_Ill_SVrefine2DISCOVARDovetail_13569:HG3_Ill_Krunchall_24950:HG3_Ill_GATKHC_30165:HG3_Ill_GATKHCSBGrefine_12405:HG3_Ill_FB_16015:HG3_Ill_250bpfermikitraw_24396:HG3_Ill_150bpfermikitraw_23668:HG2_PB_SVrefine2PBcRplusDovetail_6956:HG2_PB_SVrefine2PB10Xhap12_14191:HG2_PB_SVrefine2Falcon2Bionano_9612:HG2_PB_SVrefine2Falcon1plusDovetail_7493:HG2_Ill_svaba_23557:HG2_Ill_scalpel_17765:HG2_Ill_manta_5114:HG2_Ill_Krunchall_25415:HG2_Ill_GATKHC_30242:HG2_Ill_GATKHCSBGrefine_12570:HG2_Ill_FB_16064:HG2_Ill_250bpfermikitraw_25128:HG2_Ill_150bpfermikitraw_23626:HG2_10X_SVrefine210Xhap12_13534:HG4_PB_SVrefine2Falcon1Dovetail_12091:HG3_PB_SVrefine2PBcRDovetail_9556:HG2_PB_pbsv_19419;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13534:HG2_Ill_150bpfermikitraw_23626:HG2_Ill_250bpfermikitraw_25128:HG2_Ill_FB_16064:HG2_Ill_GATKHCSBGrefine_12570:HG2_Ill_GATKHC_30242:HG2_Ill_Krunchall_25415:HG2_Ill_manta_5114:HG2_Ill_scalpel_17765:HG2_Ill_svaba_23557:HG2_PB_SVrefine2Falcon1plusDovetail_7493:HG2_PB_SVrefine2Falcon2Bionano_9612:HG2_PB_SVrefine2PB10Xhap12_14191:HG2_PB_SVrefine2PBcRplusDovetail_6956:HG3_Ill_150bpfermikitraw_23668:HG3_Ill_250bpfermikitraw_24396:HG3_Ill_FB_16015:HG3_Ill_GATKHCSBGrefine_12405:HG3_Ill_GATKHC_30165:HG3_Ill_Krunchall_24950:HG3_Ill_SVrefine2DISCOVARDovetail_13569:HG3_Ill_Spiral_19331:HG3_Ill_manta_4146:HG3_Ill_scalpel_18127:HG3_Ill_svaba_23794:HG3_PB_SVrefine2Falcon1Dovetail_12084:HG4_Ill_150bpfermikitraw_23785:HG4_Ill_250bpfermikitraw_24732:HG4_Ill_FB_15905:HG4_Ill_GATKHCSBGrefine_13000:HG4_Ill_GATKHC_30178:HG4_Ill_Krunchall_25738:HG4_Ill_manta_4324:HG4_Ill_scalpel_17350:HG4_Ill_svaba_23463:HG4_PB_SVrefine2PBcRDovetail_9769;NumExactMatchSVs=36;ClusterMaxShiftDist=0.106195;ClusterMaxSizeDiff=0.106195;ClusterMaxEditDist=0.258621;PBcalls=13;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=29;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=55;DistBack=-1;DistForward=25276;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2;REFWIDENED=22:17863745-17863746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3422.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:2:17:0:24:1/1:0:17:1:12:1/1:0:30:./.:.:.:.:.:.
chr22	17889022	HG2_PB_SVrefine2PBcRplusDovetail_6957	T	TTTTTTTTGTTTGTTTGTTTGTTTTTGAGACGGAGTCTCACTCTGTCACCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACCTCCACCTCGCGGGTTCAAGCGATTCGCGTGCCTCAGCCTTCTGAGTAACTGGGATTACAGGCGCCCGCCACCACACCCAGCTAATTTTTGTATTTTTAATAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCAGTCTCTTGACCTCGTGATCTGCCTGCCTCCCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCTGGCCTAATTTTAAGTAAGTTTTATAAAGAGAGTAACACAATGAATTCCTGTCAGTGTCAGTGATTATTAATATTTTGTGTTCATGATCACCCAGTGAAAAGTATATCCTCGCCTCTCTTCCCAACCCAGTCAATCTCTGTCATATAACTCTTTTCTGTTTTCTTCTTCTGGGGTGACCTTTTTGGTTTACTTTAGTCTGTTTTCTCCCTAAGAATGTGAGTTATATCAGAGCAGGGATCTTCTCTATCCTATGCATTCTTGTATTTACAGTACCTAGAATTGTCCTATACATAGTAGATGTACTCAATAAATATTTACTGAGTGAGTGAATGAATGAAATAAAATTTCCAAAAGCAGGGACTGTGTTTTATCCATATTTGTGTTCTGAACTGTGTCTAGTAAAGGGCTTCACACATATTCAATCAAGTGTTTGCTGTCTATTTATTTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12092:HG4_Ill_GATKHCSBGrefine_13002:HG3_Ill_GATKHCSBGrefine_12407:HG2_Ill_GATKHCSBGrefine_12572:HG2_Ill_SVrefine2DISCOVARplusDovetail_7985:HG3_PB_pbsv_19105:HG4_Ill_MetaSV_3166:HG3_Ill_MetaSV_3210:HG2_Ill_MetaSV_3052:HG2_PB_PB10Xdip_19336:HG2_PB_pbsv_19420:HG4_PB_pbsv_19356:HG2_PB_SVrefine2Falcon2Bionano_9613:HG4_PB_SVrefine2PBcRDovetail_9770:HG4_Ill_SVrefine2DISCOVARDovetail_13363:HG3_Ill_SVrefine2DISCOVARDovetail_13570:HG2_PB_SVrefine2PBcRplusDovetail_6957:HG2_PB_SVrefine2PB10Xhap12_14192:HG2_Ill_SVrefine2DISCOVARplusDovetail_7984:HG2_10X_SVrefine210Xhap12_13535:HG2_PB_SVrefine2Falcon1plusDovetail_7494:HG3_PB_SVrefine2PBcRDovetail_9557:HG3_PB_SVrefine2Falcon1Dovetail_12085;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13535:HG2_Ill_SVrefine2DISCOVARplusDovetail_7984:HG2_PB_SVrefine2PB10Xhap12_14192:HG2_PB_SVrefine2PBcRplusDovetail_6957:HG3_Ill_SVrefine2DISCOVARDovetail_13570:HG4_Ill_SVrefine2DISCOVARDovetail_13363:HG4_PB_SVrefine2PBcRDovetail_9770;NumExactMatchSVs=7;ClusterMaxShiftDist=0.072219;ClusterMaxSizeDiff=0.0710542;ClusterMaxEditDist=0.22588;PBcalls=12;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=848;DistBack=-218;DistForward=-1;DistMin=-218;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=218;REFWIDENED=22:17889023-17889240;PctSeqSimilarity=0.9937;PctSizeSimilarity=1;PctRecOverlap=0.8857;SizeDiff=0;StartDistance=-97;EndDistance=-97;GTMatch=0;TruScore=95;MatchId=3423.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:1:12:1:25:1/1:0:7:0:7:1/1:0:19:./.:10:130:.:827:.
chr22	18136622	HG2_Ill_breakscan11_4977	T	AAAAATTGTTTATCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGTGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCCGTCCGGGAGGAGATGGGGGGTCAGCCCCCCCACCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTAAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAAGGTGGGGGGGTCAGCCCCCGCCCGGCCGGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCGCCTGGCCAGCCGCCCTGTCCGGGAGGAGGTGGGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGCGCCGCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGGCCCCTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCACCGGCCGGCCGCCCTGTCCGGGAGGGAGTGTGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCCGGAGGGAGGTGGGGGAGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGAGGTGAGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCCGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGAGGTGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCGCCCCTACTGAGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGCCTTGTGGAATAGAAAGGCAGGAAAGGTGGGGAAAAGATTGAAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTTCATTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAAACACCCAAGAATTATCAATAAAAAAATAAATTTAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4977:HG2_PB_pbsv_19424:HG4_PB_pbsv_19362:HG2_PB_PB10Xdip_19339:HG4_PB_HySA_27804:HG2_PB_HySA_34985:HG2_PB_SVrefine2PB10Xhap12_14196:HG2_PB_SVrefine2Falcon1plusDovetail_7497:HG2_PB_HySA_34984;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_breakscan11_4977;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0687445;ClusterMaxSizeDiff=0.068162;ClusterMaxEditDist=0.177488;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1698;DistBack=2356;DistForward=31890;DistMin=2356;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4003;REFWIDENED=22:18146444-18136636;PctSeqSimilarity=0.9906;PctSizeSimilarity=0.9912;PctRecOverlap=0.9918;SizeDiff=-15;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3424.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:27:./.:38:2:9:16:./.:2:1:20:0:0/1:28:12:0/1:56:105:.:1850:.
chr22	18236649	HG2_PB_SVrefine2Falcon2Bionano_9617	T	TGTGCCATTCCCCCAGTCTCCAGGACTCTGCCAGATGGGGGTGACATTCCCCTAGTCTCCAGGACTCTGCAGGACTGGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9617:HG2_PB_HySA_34989:HG4_PB_pbsv_19363:HG4_PB_HySA_27805:HG2_PB_PB10Xdip_19340:HG2_PB_pbsv_19425:HG4_Ill_SVrefine2DISCOVARDovetail_13366:HG2_PB_SVrefine2PB10Xhap12_14197;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9617:HG4_Ill_SVrefine2DISCOVARDovetail_13366:HG2_PB_SVrefine2PB10Xhap12_14197;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0779221;ClusterMaxSizeDiff=0.0628931;ClusterMaxEditDist=0.264151;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=78;DistBack=33728;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=396;REFWIDENED=22:18236650-18237045;PctSeqSimilarity=0.9773;PctSizeSimilarity=1;PctRecOverlap=0.0506;SizeDiff=0;StartDistance=-75;EndDistance=-75;GTMatch=0;TruScore=67;MatchId=3425.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:22:./.:10:15:7:4:./.:5:0:6:0:0/0:41:0:./.:.:.:.:.:.
chr22	18359463	HG2_PB_SVrefine2Falcon2Bionano_9618	G	GGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGCTTATGGAGGTTAGGGAGGTTAAGGAGGTTAGGGAAGTTATGGAGGTTAGGGAGGTTAGGGAAGTTATGGAGGTTAGGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGGTTATGGAGGTTAGGGAAGTTATGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAAGTTATGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTGAGGGGAGGTTAGGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAAGTTAGGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAAGTTATGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTGAGGGAGGTTAGGGAAGTTATGGAGGTTAGGGAGGTTAGGGAAGTTATGGAGGTTAGGGAGATTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAAGTTATGGAGGTTATGGCAGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAAGTTATGGAGGTTAGGGAGATTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGGTGAGGGAGGTTAGGGAGGTTAGGGAAGTTATGGAGGTTATGGCAGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGATTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAAGTTATGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAAGTTATGGAGGTTAGGGAGATTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAAGTTATGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTTATGGAGGTTAGGGAAGTTATGGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12090:HG2_PB_SVrefine2Falcon1plusDovetail_7500:HG4_PB_pbsv_19366:HG2_PB_SVrefine2PBcRplusDovetail_6961:HG2_PB_SVrefine2PB10Xhap12_14200:HG3_PB_SVrefine2Falcon1Dovetail_12092:HG3_PB_pbsv_19111:HG2_PB_pbsv_19427:HG3_PB_HySA_28883:HG2_PB_HySA_34991:HG2_PB_SVrefine2Falcon2Bionano_9618:HG2_PB_SVrefine2Falcon1plusDovetail_7499;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9618;NumExactMatchSVs=1;ClusterMaxShiftDist=0.213013;ClusterMaxSizeDiff=0.213013;ClusterMaxEditDist=0.284972;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1513;DistBack=37248;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=390;REFWIDENED=22:18359464-18359853;PctSeqSimilarity=0.9934;PctSizeSimilarity=0.9993;PctRecOverlap=0.8427;SizeDiff=1;StartDistance=-238;EndDistance=-238;GTMatch=1;TruScore=94;MatchId=3426.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:3:26:1:8:1/1:4:150:2:474:./.:1:5:0/1:13:69:.:1551:.
chr22	18394639	HG4_Ill_Krunchall_25746	G	GCTTTGGAATGCCATCAGGAGGAAGCTTAGATGAAAAATGCACTATGGATTACTGAGATTCC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_25135:HG2_Ill_breakscan11_4978:HG4_Ill_manta_4326:HG4_Ill_Cortex_2203:HG2_Ill_manta_5117:HG2_Ill_Cortex_5222:HG2_CG_vcfBeta_10812:HG4_PB_HySA_27807:HG2_PB_HySA_34993:HG4_PB_pbsv_19367:HG4_Ill_GATKHC_30186:HG4_Ill_GATKHCSBGrefine_13008:HG2_Ill_GATKHC_30253:HG2_Ill_GATKHCSBGrefine_12576:HG4_Ill_svaba_23468:HG4_Ill_scalpel_17355:HG4_Ill_Krunchall_25746:HG4_Ill_250bpfermikitraw_24738:HG4_Ill_150bpfermikitraw_23790:HG2_Ill_svaba_23562:HG2_Ill_Krunchall_25424;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25135:HG4_Ill_svaba_23468:HG4_Ill_scalpel_17355:HG4_Ill_Krunchall_25746:HG4_Ill_250bpfermikitraw_24738:HG4_Ill_150bpfermikitraw_23790:HG2_Ill_svaba_23562:HG2_Ill_Krunchall_25424;NumExactMatchSVs=8;ClusterMaxShiftDist=0.134454;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.156522;PBcalls=3;Illcalls=17;TenXcalls=0;CGcalls=1;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=61;DistBack=4;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=22:18394638-18394640;PctSeqSimilarity=0.9841;PctSizeSimilarity=1;PctRecOverlap=0.9836;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=3427.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:33:0|1:36:3:2:28:1|0:0:26:20:0:0/1:26:26:./.:.:.:.:.:.
chr22	18466232	HG2_Ill_GATKHCSBGrefine_12577	A	ATCTCTACCTATTATCCTCATGACAGAACCCTGTGCGCCCCAAGGATGGAGACCG	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_12577:HG2_PB_pbsv_19429:HG2_PB_PB10Xdip_19351:HG4_Ill_svaba_23472:HG4_Ill_GATKHC_30188:HG4_Ill_GATKHCSBGrefine_13010:HG4_Ill_150bpfermikitraw_23791:HG2_PB_assemblyticsPBcR_16043:HG2_Ill_svaba_23565:HG2_Ill_Krunchall_25425:HG2_Ill_GATKHC_30254;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12577:HG4_Ill_svaba_23472:HG4_Ill_GATKHC_30188:HG4_Ill_GATKHCSBGrefine_13010:HG4_Ill_150bpfermikitraw_23791:HG2_PB_assemblyticsPBcR_16043:HG2_Ill_svaba_23565:HG2_Ill_Krunchall_25425:HG2_Ill_GATKHC_30254;NumExactMatchSVs=9;ClusterMaxShiftDist=0.106195;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.176991;PBcalls=3;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=54;DistBack=0;DistForward=53;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=110;REFWIDENED=22:18466177-18466286;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:35:1|0:0:34:23:0:./.:6:8:6:0:0/1:17:15:./.:.:.:.:.:.
chr22	19142022	HG2_PB_SVrefine2PB10Xhap12_14205	G	GACTGACTACAAAAAAATTGTAAAAATTAGTTTTGGTGGTGGCCCCGGCTTGTGGTCCCAGCTATTTGGGAGGCTGAGGCAAGGGGATTGCTTCAGCCTGGAGGTTGAGGGTGCAGTAAGCCATGATCGTACCACTGCACTCCAGCCTGAGCAATACAGAAAGACCTTGTCTCTAACTAAAACAAAACAACAAAACAAAATACCAGAACATAAAGGGTTGCTTCACAGACACTTTCCAACAGACCAGACAGTCAAGCTGCGGGGCTGCAAGGGTGTGGAGTTCCTGACAAATTCAAAGAAGGGGCCCCCAGTTTCAAGGGAGGGGCATAAAGAGACTCTGCCTCTGTGTGGAGGGATGGAGAGGAGCAGGAGCTGGGAAACCGCCCACCCACCCACTTCCTAATCCCACACCCACCCACCTCTCTTATTATCACTCCCTGGAATTGCAGCCCAAGACAGGGATTTGGGCACCAGGGCTTCCTGAGGTGGTAGGGGAGGGCAGGGGATACAGAAGCTGCAGAAGCTCCACTGTAGCCCACAGAGGGTCGGGGTGCACAGTCTCCCCGCTCCAAGGCGGCTCCTACTTGGCCAGTGCTCCAGAGAAGGGGCCTGCTGTGAGTGACCTTCTAAGGTCAGCTGCAGGTGGAGGGCTCCAGGTGAGGCTAAGGGTGGTTCCTATAGCCCTGCAGAGCTCTGCTCCCCTGGCTTCTTGGGCTAAGTCCATTCCATTCAGATGCAGGGAACAGGAAGTCTGATTGGTCACAGCTGCTGGGCAGGTGTACAGGAGGAAGGTTGGTGGGGCCAGCAGTTGCCCCTGCTGCATGAGTTGGTCCTGAGGTTGTAACTGAGGATCATCCCCTCCCCATTCCTTCCCTTTTCAGGGCTCCCTCTCCTGGAGCTGGAAGCACTTCTGAAGGTCTGGGTGGCTCACCTGGCGGGCTGATCCAGGTCCTCCTCCTCGAGGGGTCTGATCCCCTGGGTGCCAGCCCGTGGCAGGCTGCAGTGCTCTAGTGGCCCATTGACAGGGAGGGCTGGGCATGGGAGCATCACAGGACATCCAGGGGATGCCCGGAAGATGGAACATTCCTCCCGGTCCCCAGTATGAGCTGGGGTGGGTACCTGGGCCAGCGTGGGGACTCCTTTGCTTGCTGGCACAAGGAGGCTAGAGTGACTGGGCCACTGTCATAATTTATGTTTCATGCAACCCTTACCATGACCCTGGTGATGGCGCTCCCCGCCTCCCACCCCGACAGACCCAGAACCTAAAGTTGTGAGCTTGGGAACACAACCACTCCAGGGGGATTACCAGGAATCCTGGGGAACGAAGCACCCCTGGGTCTCAGACCACTGCATTCACCCACGGAAGCAGC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_19359:HG2_Ill_SVrefine2DISCOVARplusDovetail_7995:HG2_PB_pbsv_19441:HG2_PB_assemblyticsfalcon_16554:HG3_PB_SVrefine2Falcon1Dovetail_12095:HG2_PB_SVrefine2Falcon1plusDovetail_7507:HG2_PB_SVrefine2PBcRplusDovetail_6968:HG2_PB_SVrefine2PB10Xhap12_14205:HG2_PB_SVrefine2Falcon2Bionano_9622:HG2_PB_HySA_35009;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14205:HG2_PB_SVrefine2PBcRplusDovetail_6968;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0813583;ClusterMaxSizeDiff=0.0813583;ClusterMaxEditDist=0.169084;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=1369;DistBack=18189;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=22:19142023-19142025;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3430.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:58:1/1:1:19:1:14:1/1:0:7:0:16:1/1:0:10:./.:14:164:.:9070:.
chr22	19210895	HG3_PB_SVrefine2Falcon1Dovetail_12097	T	TAAAAACCACCTATGCTGGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGACAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACAAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAA	10	PASS	ClusterIDs=HG2_PB_HySA_35012:HG2_PB_pbsv_19444:HG2_PB_PB10Xdip_19364:HG2_PB_assemblyticsfalcon_16558:HG2_PB_SVrefine2Falcon1plusDovetail_7509:HG3_PB_SVrefine2Falcon1Dovetail_12097:HG2_PB_SVrefine2PBcRplusDovetail_6970:HG2_PB_SVrefine2PB10Xhap12_14207;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_12097;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0254098;ClusterMaxSizeDiff=0.0254098;ClusterMaxEditDist=0.130164;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6044;DistBack=10774;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=22:19210896-19210913;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9974;PctRecOverlap=0.9974;SizeDiff=-16;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:39:0|1:26:1:0:26:0|1:20:0:0:10:0/1:25:5:0/1:193:699:.:9070:.
chr22	19906758	HG2_Ill_GATKHCSBGrefine_12586	A	ACCCAGGCTGGAGTGCAATGGCGCGATCCTGGTTCACCCCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCCGAGTACCTGGGATTATAGGCATGCGCCACCATGCCCGGCTAATTTTGTATTTTGAGTAGAGATGGGATTTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCCAACCTCAGGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACACGTGTGAGCCACCGTGCCCGGCCTATTTTTATTTTTAATTTAAAAAAAATTTTTAGGCTGAGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGAGAGGCCGAGGCGGGCAGATAACCTGAGGTCAGGAGTTCAAAAACAGTCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTCGGTGTGGTGGCACACGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCACAAGAATCACTTGAACCCGGGTGGCAGAGGTTGGCAGTGAGCCAAGATTGCACCACTGCACTCCAGCCTGGCTGACAGAGCGAGACTCTTTCTCAATTAAAAAAAAAACTTTAGAGATAAGTTCTCACTCTGTTG	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_13584:HG3_Ill_Spiral_19350:HG2_PB_pbsv_19449:HG3_PB_pbsv_19129:HG4_PB_pbsv_19386:HG2_PB_HySA_35019:HG2_PB_PB10Xdip_19366:HG4_PB_HySA_27852:HG4_Ill_manta_4332:HG4_Ill_MetaSV_3172:HG4_Ill_GATKHCSBGrefine_13020:HG2_Ill_MetaSV_3058:HG2_Ill_GATKHCSBGrefine_12586:HG3_Ill_MetaSV_3215:HG4_PB_SVrefine2PBcRDovetail_9777:HG2_PB_assemblyticsfalcon_16564:HG2_PB_SVrefine2Falcon2Bionano_9626:HG2_PB_SVrefine2Falcon1plusDovetail_7511:HG4_Ill_SVrefine2DISCOVARDovetail_13379:HG3_PB_SVrefine2Falcon1Dovetail_12099:HG2_PB_SVrefine2PBcRplusDovetail_6972:HG2_PB_SVrefine2PB10Xhap12_14211:HG2_Ill_SVrefine2DISCOVARplusDovetail_8000;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12586:HG2_Ill_MetaSV_3058:HG4_Ill_GATKHCSBGrefine_13020:HG4_Ill_MetaSV_3172:HG4_Ill_manta_4332;NumExactMatchSVs=5;ClusterMaxShiftDist=0.123596;ClusterMaxSizeDiff=0.123596;ClusterMaxEditDist=0.178295;PBcalls=13;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=615;DistBack=-16;DistForward=493;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=21;REFWIDENED=22:19906754-19906774;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3432.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:1:19:0:28:1/1:1:8:0:11:1/1:0:41:1/1:2:103:.:.:.
chr22	20239075	HG2_Ill_SVrefine2DISCOVARplusDovetail_8004	T	TCATCAGCAGCAGCATCATCACCATCATCACCACCACTATCATCATTACCATCCTCATTACCATCACTATCACCACCATCATCTTCATCACCATCCTCATCACCATCACCATCCTCAACACCATCCTCAACACCATCATCACCATCACTATCATCATCACCATCACCATCCTCAACACCATCATCACCATCACTATCACCACCACTATCATCCTCATCACCATCCTCATCACCATCACCAGCCTCAACACCATCATCACCAACACTATCACCATCATTATCATCATCACCATCCTCATCACCCTCACCATCCTCATCACCATCATCACTATCACTATCACCACCATCATCATCACCATCACCATCCTCATCACCATCACCATCCTCAATATCATCACCATCACTATCATCATCACCATCCTCATCACTATCACCATCATCATCATCCTCATCACCATGACCATCATCACCATCCTCATCACCATCACCACTATCACCATCAGTATCACCATCACTATCATCATCACCATCCTCATCATCACCATCATCCTCATCACCATCATTACCATCACTATCATCATCACCATCCTCATCACTATTATCACCATTACCATCAACACCATCACTATCACCATCACCATCCTCATCACCATCACCATGACCATCATCACCATCCTCATCACCATCATCTTTATCCTCATCACCATCACTATAACCATCATCACCATCCTCATCCTCATTATCCCCATCACCATCCTCATCACCATCACCATCAGCAACCTCATCACCATCACCATCAGCATCCTCATCACTATCATCACCATCCTCATCACCATCACCATCATCACCATCCTCATCACCATCACCATTATCACCATCCTCATCACCACCATCACAATCACTATACCATCACTAGCATCATCATCATCACCATCCTCATCACCATCATCACATCACTATCATCACCATCATCATTATCACCATCAGTATCACCATCACTATCATCATCATCAGCACCATCCTCATCAACATCACCATTATCCTCATCACCATCATTACCATCACTATCATCATCACCATCCTTATGATCATCATCATTACCATCATCACCATCACTATCACCATCATCACCATCCTCATCACCATCATCACCATGACCATCATCACTATCCTCATCACCATCATCCTAATCCTCATCACCATCACTATAAACACCATCACCATCCCCATCATCCCCATCACCATCCTCATCACCATCAGCATCAGCATCCTCATCACTATCATCATCACCATCATCATCCTCATCACCATCATGACCATCCTCATCCTTGTCACTTCATCACCATCAGCATCCCAATCGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9629:HG3_PB_SVrefine2Falcon1Dovetail_12102:HG4_Ill_SVrefine2DISCOVARDovetail_13382:HG2_Ill_SVrefine2DISCOVARplusDovetail_8004:HG3_Ill_SVrefine2DISCOVARDovetail_13586:HG2_PB_SVrefine2PBcRplusDovetail_6975:HG2_PB_SVrefine2PB10Xhap12_14214:HG2_PB_SVrefine2Falcon1plusDovetail_7514;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8004:HG4_Ill_SVrefine2DISCOVARDovetail_13382;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0103474;ClusterMaxSizeDiff=0.0103474;ClusterMaxEditDist=0.015544;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=1359;DistBack=18829;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=655;REFWIDENED=22:20239076-20239730;PctSeqSimilarity=0.9738;PctSizeSimilarity=0.9926;PctRecOverlap=0.7167;SizeDiff=10;StartDistance=-380;EndDistance=-380;GTMatch=0;TruScore=89;MatchId=3433.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:83:1/1:1:25:0:18:./.:4:18:0:17:./.:0:3:1/1:10:185:.:1551:.
chr22	20857814	HG2_PB_SVrefine2PB10Xhap12_14217	T	TGGCGCGGTGGCCCATGCCTGTAATCCAGCACTTTGGGAGACTGAGGCAGGTGGATATTTGAGGTCAGGAGTTCGAGACCAGCCTAGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAAGTATGGTGGCGTGCGCCTGTAATCCCAGTTACCTGGGAGGCTGAGGCAGAATTGCTTGAACCCGGGAGGTGGAGGTTGTAGTGAGCCAAGATGGCACCACTGCACTCCAGCTTGGGTGACCGTGAGACTCCATCTCAAAACAAACAAACAAAAAAACAAACATGAATTGCTTGATGCATGGAAGTTAAAAAAACAAGAGGGCCGGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATTGAGACCATCCTGGCTAACAAGGTGAAACACCGTCAACACTAAAAATACAAAAAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAATCCCGGTTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAAGCAGAGCTTGCAGTGAGCTGAGATCGCACCACTGCACTCCAGCCTGGGTGGGAGAGCGAGACTCCATCTCTAAAAAAAAATAAATAAATAAGAGGGAGGAATTTTTTCGTTTTTGTTTTTTGAGACAGGGCCTTGCTTTGTCACTGAGGCTGGAGTGCAGGGGCGATCTCAGCTCTTTGCAGCCTCAACTTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCCCGAGTAGCTGGGACTACAGATGTGTGCCACATCTGGCTAATTTTATTTTTTTGTAGAGATAAGGTCTTGCTTTGTGGCCCAGGTGAAACCTTGTTTTTTAACATGAGTTAATATCAGTGTAAAGAGTTATGGTTTTACCTATTTTTTTTTTCCTCAGACAGGGTCTCATTGTCACCCAGGTTGGAGTGCAATGGTGAAATCATAGCTCACTGCAGCCTCCAACTCCTGAGCTCAGGCAGTCCTCCCACCTCAGCCTCCTATTTTTGAAAATTATCCTGTAATATCTGTAATGTGTGAAATTATATAAAGAGCCTTAATATGTTTGTCCCTGAAACCCAGGATGCATTTCTGTTTTTCCCCAAGAGTAAATGATTATTTAGAAAGCATGCCAAATTATATACAAATCAACATTCTCTCCCATAATCCTGTGCATCTGAAACTATAGAAATGTCACAGTCCCTGCCCCACATCTTCAAATTAACATTCTCAGGTCACAACAATAAGTCTTTTCTTCCCAAAGGGCTTGTCTCTGGAAAAACAAGCTATTTCCTAGGCTCATATTTCCTCTCTTTGTAGCATGCCTCAGCAATCTATCCAAGAAGTATATATTGGGGAGTAAGGAGGGCATCCACCAGCAAGACTACAGTTGTTGGCAGCCATAAGATTGGAGACAAGCACAGAGGGATAGGTCAACATACTGGCAAAAAAAATCCTGTGACAGCTTGAGAATAACTCTTTAATAATGAGAATAACTCATTAATGGTAGAAACCCCACTGTCCATTGCATGGGTATCGACAAGGTGGTAGGCTAGTGAGTCACAAAGCCACAAAGAAATGATGTCATCTAGGAGGTGAGGAACAAGACCTGGGAAAAATCCTAGGATACCCTCTTCCTGATAAATGGTTAGTATGGTGTCACAAAGTCCACAGAACTTGGATTCTCTCCCAGTGAATTGTGCCATAGATCTCAGAGTGAGCACATGGAAGGGACGTGATGAGGGCAGCAGCAGAACAAGCGATCATCTCTTGAGTTGTTTCCTTGATAATTTGGTCAAAGGAAGACGAGATTTCTTTCTGTTCATATCCAGGTCCTAACTCCTCACCCTTGTCACACTCCTGGTAATGCTGTAAAACTTTACCATGGACCACAGTTCCAAGGACCCCCGAATGCAGTCATGGAGTTAAGCCTGTGAACAACCCACACCTCCTGTCAATGCTGGCAATGTTCAGAGCATAACAAAAGAAACCAGAAAGCTGACATACTTCCTACCCCAAAATATTTTGTCCTGTTGGGGGAAGAGGCTCATATCCCACCTGGATGAGCACTTTCATGTGCATGAGTCGCTAGGACAGGATGGTGAGACCGGAGTCCAGGAGCATCTGACTGGCAAGCAACATCTGCCGTGACAGCACCTGTATTATTCTGTTTTCATGCTGCTGATAAAGACATACCCAAGACTGGGAAGTAAAAGAGGTTAAATTGGACTTACAGTCCCACATGGCTGGGGAGGCCTCGGAATCATGGTGGGAGGTGAAAAGCACTTCTTAATAGGGTGAGGGCCAGAGAAAATGAGGAAGAAGCAAAAGCGGAAACCCCTGATAAACCCATCAGATCTTGGGAGACTTACTTTTGGGAAAGACCTGCTGCTTGATTCAATTACCTCCCCCTGGGTCCCTCCCACAACACTTGGGAATTCTGGGAGATACAATTCAAGTTGAGATTTCAGTGCGGACACAGTCAAACCATATCAGCACCAGTGGATGGACAGACCCAGGATGCATTTCTTTTCTTTTCTTTTCTTTTTTTGGAAACGGAGTCCCACACTGTCGCCCAGGCTTGGAGTGCAGTGGCTCCATCTCTGCCCACTGCAGCCTCCCCCTCCCGGGTTCAAGTGATCCTCCTCCCGCCTCAACCTCCTGAGTAGCTGGGATTACCAGCATGTGCCACAACACCCAGCTACTTTTTGTATTTTCAGTAGAGATGGGGTTTGGCAATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCCAGGATTCCAGGCATGAGCCATTGCATCCAGCCCCAGGATACATTTGTAAAGGCTGGATTCAGGACAATTTCTAAAACTGTGCACCAAGATGACACTGTCAACTTACATGTCCAAGAATGTTGGAGTGAGCAAGACGTGAGAGATTCATAGAGATGGCATATGATACTGGTATTAAAATTGTCTGGTTTTTTTTTTTTTTCTTTTCTTGAGATGGAGTCTCGCTCTGCTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTGATCTCCTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACCGCGCCCAGCCAAAATTGCCTTTTAAATCTGTTACATTGGCTGGGCGCAGTGGCTCAGGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAAATTAGCCGGGCATGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCAAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAGTTACATTTGGTTGTATATAGATTTACCCATGATGTAATTCTATAATCAAAATTATAATTAAATTTTAATGAAAATTTTAGTTAATAATAAATTAATACTTATGAAAATGCTTAGGCACTAACATTAGATTTACAACACAGGATCCAAATGGCATCTACGGCATGATCCATTACATTTTTTTTGTTGTTTTTTGTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTTGCCCATGCTTGAGTGCAGTGGTGCCATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATCCTCCTGCTTCAGCCTCCCAAGTAGCTGGGATTACAGACATGAGCTACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAAAGGGGGTTTCACCATGTTGCCCAGAGTGCTCTCGAACTCCTGACCTCAGGTGATCCACCCATCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGCGCCACTGCGCCTGGCCCCCATTACAGTTTTTAAACGAACAGAGAGGACAAGAAAATTTACCAAAATATTGACAATCCTGTCTCTGGATGATGGGATTCATAATGTTTGGGCCTTTCTAAAGTTTCTACCGTGTATGGCTTTTAGAAACAATAACCGTCG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13546:HG4_PB_pbsv_19397:HG2_PB_HySA_35051:HG2_Ill_breakscan11_4981:HG4_PB_HySA_27888:HG3_PB_HySA_28934:HG2_PB_PB10Xdip_19398:HG2_PB_assemblyticsPBcR_16075:HG2_PB_assemblyticsfalcon_16590:HG3_PB_assemblyticsfalcon_16512:HG4_PB_SVrefine2Falcon1Dovetail_12102:HG3_PB_SVrefine2Falcon1Dovetail_12104:HG4_Ill_SVrefine2DISCOVARDovetail_13384:HG4_PB_SVrefine2PBcRDovetail_9780:HG3_Ill_SVrefine2DISCOVARDovetail_13588:HG2_PB_SVrefine2PB10Xhap12_14217:HG2_PB_SVrefine2PBcRplusDovetail_6978:HG3_PB_SVrefine2PBcRDovetail_9566:HG2_PB_SVrefine2Falcon2Bionano_9631;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14217:HG3_Ill_SVrefine2DISCOVARDovetail_13588;NumExactMatchSVs=2;ClusterMaxShiftDist=0.176597;ClusterMaxSizeDiff=0.176597;ClusterMaxEditDist=0.241818;PBcalls=15;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=4278;DistBack=14845;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=296;REFWIDENED=22:20857815-20858110;PctSeqSimilarity=0.9963;PctSizeSimilarity=0.9991;PctRecOverlap=0.957;SizeDiff=-4;StartDistance=-182;EndDistance=-182;GTMatch=0;TruScore=98;MatchId=3434.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:85:1/1:1:20:1:22:./.:0:3:0:3:1/1:0:12:1/1:1:574:.:.:.
chr22	22475205	HG2_Ill_250bpfermikitraw_25200	A	ATTATTTAAATAATTATTTAAATAACTATTTAAATAATTATTTAAATAACTAATTAAATAATTATTTAAATAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7530:HG4_PB_pbsv_19399:HG2_Ill_breakscan11_4983:HG2_PB_pbsv_19464:HG4_Ill_svaba_23525:HG4_Ill_Krunchall_25798:HG4_Ill_GATKHC_30266:HG4_Ill_GATKHCSBGrefine_13037:HG3_Ill_svaba_23864:HG2_Ill_svaba_23626:HG3_Ill_Krunchall_25017:HG3_Ill_GATKHC_30253:HG3_Ill_GATKHCSBGrefine_12436:HG3_Ill_250bpfermikitraw_24464:HG3_Ill_150bpfermikitraw_23725:HG2_Ill_manta_5126:HG2_Ill_SpiralSDKrefine_10425:HG2_Ill_GATKHC_30340:HG2_Ill_GATKHCSBGrefine_12599:HG2_Ill_250bpfermikitraw_25200:HG2_Ill_150bpfermikitraw_23680:HG3_Ill_Spiral_19378:HG3_PB_pbsv_19144:HG2_PB_SVrefine2PBcRplusDovetail_6983;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23680:HG2_Ill_250bpfermikitraw_25200:HG2_Ill_GATKHCSBGrefine_12599:HG2_Ill_GATKHC_30340:HG2_Ill_SpiralSDKrefine_10425:HG2_Ill_manta_5126:HG3_Ill_150bpfermikitraw_23725:HG3_Ill_250bpfermikitraw_24464:HG3_Ill_GATKHCSBGrefine_12436:HG3_Ill_GATKHC_30253:HG3_Ill_Krunchall_25017:HG3_Ill_Spiral_19378;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0933333;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.269231;PBcalls=5;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=72;DistBack=-13;DistForward=23;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=46;REFWIDENED=22:22475184-22475229;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3435.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:22:0|1:16:1:5:19:0|1:12:0:0:15:0/1:40:23:./.:.:.:.:.:.
chr22	22486368	HG2_PB_SVrefine2Falcon1plusDovetail_7531	T	TGCATATTTCTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGTCAGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCTCCCCAACCATCTGAATC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12104:HG4_PB_pbsv_19400:HG4_PB_SVrefine2PBcRDovetail_9784:HG2_PB_SVrefine2Falcon1plusDovetail_7531:HG2_PB_SVrefine2PBcRplusDovetail_6984;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7531;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0193108;ClusterMaxSizeDiff=0.0169802;ClusterMaxEditDist=0.135678;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=6050;DistBack=2;DistForward=10;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=22:22486369-22486379;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9985;PctRecOverlap=0.9987;SizeDiff=-9;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:51:0|1:26:0:0:41:0|1:33:0:0:12:0/1:29:10:0/1:188:668:.:6124:.
chr22	22534125	HG2_Ill_MetaSV_3065	T	TAAAACCAGAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCTCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCCCGCCACTGCACTCCAGCCTGGGCGACAGGGCGAGACTCCGTCTCAAAAGAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_HySA_35071:HG2_PB_SVrefine2PBcRplusDovetail_6985:HG3_PB_HySA_28953:HG3_PB_pbsv_19145:HG4_PB_SVrefine2Falcon1Dovetail_12105:HG2_PB_pbsv_19465:HG4_Ill_GATKHCSBGrefine_13038:HG3_Ill_GATKHCSBGrefine_12437:HG2_Ill_MetaSV_3065:HG4_Ill_MetaSV_3177:HG3_Ill_MetaSV_3221:HG3_PB_SVrefine2Falcon1Dovetail_12106:HG2_PB_SVrefine2Falcon1plusDovetail_7532;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_MetaSV_3065:HG3_Ill_GATKHCSBGrefine_12437;NumExactMatchSVs=2;ClusterMaxShiftDist=0.231788;ClusterMaxSizeDiff=0.231788;ClusterMaxEditDist=0.258278;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=316;DistBack=12966;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=22:22534126-22534136;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9968;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3437.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:23:0:0:22:0|1:26:0:0:11:0/1:31:6:0/1:9:18:.:.:.
chr22	22752585	HG2_10X_SVrefine210Xhap12_13555	G	GCTGGGAAGACTGTGTGTGACTCACACCATGGAGAGAAGGACTAGAGGAAGGAGGCCAATGGTTGAGGCCCTGAGCGTGTCCTTGTGATGGAAACCTGACAACAGCCTGCAACTGTGATCGAGTGTGTCACTCTCCTCTTCTCTCTGGAAAGCTCACAGGACTCAGGACTCATTGCTGCCCTTCCCTCCTATCAATAAGATTAATGCGAACCATCACTTTACACACCTGAAAAGAGACCTGGTTACTTTCTTTTATTTATTTATATATATATATATGCGGATATATATATATATATGCGGATATATATATTTTATATTGATATTGATATATATTTGCATATATTTATATATCTTATATATAATATATATATGCTGTTTTTATTTATATTATTCTGAATTTTTTTTATTATACTTTAAGTTCTAGGGTACATGTGCACCACATGCAGGTTGGTTACATATGTATACATGCGCCATGCTGGGTGTGCTGCATTTAGCTCAGCGGTTACTTCACATGTGATCAAACCACCTCTCTGGTTACTTTCTATTGAGCAAAAGCCCCAAGGGTCGGGACAGAGCACTGCAGAGCACATGGGATGATGCCCTACACACTCAAGGGGCTGCTGTTACTGCTGTTAAAGCTCACGATCAAACCTCCCAGAGCTCTGTCAGAAACCATGAGACGGGAGGTGTCAGTGCTGAAGTAGCTGATTTGGGAGCACACTGATTTGTGGTACGTGCAGGTGCAGGAGACTGAGGACTGAGGCCCGGCACAGGCAAATGGCTCCCAAGGTGTCATTATGGGGCAGGGCGCTTGTAGCCTCCTCAGTGATAGGTGGGGGTAAAGGTCAATTAAAAAGCTGGAGAGCAGTGGAAAGGCAGGATTCTGAGTCTGGGCAAGGAAAGGAGGTCCAGCCCCCGCCCAGGCATCCTTATTCACCCTTCTCTTTACCTTCCTTCCTCCCTGCCACCTTCCCAGGGAAGGCTTCCAGGGCTGTGGTGTCTCTGCTGCTCTTCCTCTGTCACAAAGAGAGCAGTAGGGAGGTTATCTGATGGCAAAGCTATCTCCTCACACTCAGTTGTCTAGTTACCCTGAGGAATTCCTCTGGAAGATGGGAATGTTCTGTTTTACCTCTGGCCTACAGTGAGATCTCAGCCATTAATGAAGCCAAGAAGAATGACCACATTCTGTTTACACAGGATTATTTATAACACACATAGTCAAATAACACCATCAAGTTCTAAGCACGTCAATCCATTCTTCAGAATTATAGAAATGCATGTCTCTCAGCTGTCAGCAATGGGCTTCAAATCCCCAGGGTGACTAATGGGTCAGGGTGGGATCAGCCACATGAAGAGGTTTCTTTACAGTTAGTGACTCTGTTCACTGTGTTTCCCCTGCTGAGATCCAACCTCCATGAGATTCTTCACTGTAGTTGTTGCTGTTTTCTATCTTGTCATTGCTGTACCTACAGAGACGAAAACACTGCCTGGCACTAAGGACAGGCTCAATACATGTTTGTTAAATATGTGAGTTCACCTACATTGGAATTCCAAAAAGAGATACAGATCTGAGGTCAAGATAATACTTTTTAAAAAAATTCTGGATATTTTGTGTTTGAGATTCCAAGTTCATTCAATAGAAGATATTAAGCAAGAACTTTTGCCTTTGGATTTGGTTAGCAGGAGAAGGATATGGATATAAAAATACATATATATCACACACACCGCCCCATGGCCCAGAGACTTTAGAACCCAACTGATCTCTGCAGCTGCCAATCACGGCCTCTGTTCATTCACTTATGGTCTGATTCCCATGGATCCATATATGCTGGATCCCATGGGTTCATGTGGAGAAAGTGGAGAGGATGTGATGGGCTTTCCCAGTCCTGCTTAAAGAAACCACAGGAAGCAAGTAGATCATAAAGCAAATTCTGGGGACAGAATTCCCTCGAGAGCAAATAAACTGCAGAATATGGGTGAACTGGGAAAATTTCTGGTAATATTTATACAACTAAGAAACTTTACATTAGATACCCTTCAACACAATATTCATTACAGAGCTTTAAATCAGCCATATGATCAATGCAATTCAAACATTAAACTCATCCACCCGAAGTCCCATAATAGGCTTTGTTGAGGAAATTCTTGAAGGAAGAATGATGGGTTTGTGAGCTCTGTGTCCACAGAAGAGATATTTCTGCACTAGGAGGACTTGGTAAAGCTGATAAATAATTAGGAATGTAGGTGCCCATCTGGACTATATTCTAATCCAACATGCAATGCTGTGAGTCCTGTATCTGCAAATCTTAGCATTCATTGTACTTCCTTCAATTTCCCAATTATTACAATAAATTAACTTTAGACATGGATGATCAAAAAAAATCAATTAATGTGAGAATCCTTGAAATCTGTTGCTTTAATGCGCAAAAATTAGGGAATACTTCACATGTATATATTGGTTAATTTATATACCAATGATATGCTACCTCTTCATTGGTCTACTGTAAAAATCACCTAGCCAGGGGCTAAGTTGATGGGTAAAAGGTGTTGAAAAGTTAAACAACATGAACCACATTGATGATGGTCAAAGTTGGCTGAGGGATACAAACAATTCATTAGAAAATTATCAGTCTGTTTGTGTGACTCAAAAGTTTCCATGATAACCAGTGTTAAAGTATCCTTGTTTATGATGAGATGATTGTGTTCTGCTTTTAACAGGTGTACAATGTGGACAAAATGCAAGCTTACACTTTGATTTCAAGTAGAAGACCATCTTCTCCCAACAGGCAGAGGAGAAGCTGGGGTGGAGGTCATGGAAAAGACAGGAGCTCAGGGTTTCCCAGGACAGACAGGCGAGTGAGTCTGGAGCCCTCAAATGAAGAGGAGGGGCTGTGAGTTGGGCTGTGGGGGTGTGCAGGGGCCACAGTGTGAAGGGCATGCTGCGGAGGCCTCAGGGCTCAGGTTTTATAAAAATGAGGAGTTACTGAAGGGGTTTAAGCCAGGGAGTGCCTTCCCTGCCTCATCTGAATGAGAGAGATCTCTCCGAATGCCCTGAGGAGAGTGCCTGAGGGAAGTGAGTGATCCTGATTCTAGATTATTCGCTAAAGCACCTCGTGAGTCTAGAAATTCAGGGGCCATTTGCACAGTTAGTACAAGAGTAGACGTGGTACTTTGAGGAGGGATGGTCTCTGCCTTTGTCTCCTGAGACATCCAACTCACTTGCAAGAGAACTTTGAGGGCAAAATACATACTGATCTTTCTAATAAACTGAAAACATCCAGTCAGAAAATACATGTGGCAACATCACATTACAAAGAAATAGTATAACATCTAGGACAAATTCTTGACCAAAAAATATGACAGAACTGTGCAGACAATGACAAGTTTTACTTAGGGAGATAATGGCTAACTTCATAAAATAGAGAAATACATAATTGTTCACTGATAAAGGTAAGTCTACCAAATCTATTAGTTTTCCTGTATTACTAAATTGAGTCAAATCCCTATAAAACATATGAAACCATTGCATATATAACTTTTGCTAAATTGCTGCCTTTAACATGTCAAGAATTTTTTTATTTTTCCTGGAAAAGTCTCATTATTCACCGTCCTTTTGGACAGCCCCCAGCTGCCCTTCAACCCAGCTCCTTAGCTGATCACTTTTCCATAATGCCCACCCTAATGGCACATGTGGGCAATTAGATTTTTCTAGAATGCCCTGCGGTGATGCTGACACCTGTAAAAGTTATATATGTACATGTCTGCACATCCCACAGACCAGGACTACTACTGGGAGTGAGAAATCACACTAGTAATTCATAGCATAATAGAAGTGTCTAGGAATCAGATCAAGGATATGTGAATCCAGAGACTGACTGGTGAATGGTAGAGACCAGCTGGGTTTTGAAGTCTCTGAGCCATGGGAAAGTGTGTGTCCGGGGACCAGCGTCGGATGTTGTGGGGCTGCCCTGTGGGTGCTACACAGCTGTTCAGTAAGGAACATTCACTCAAAGAAATCCAGGCCTTGGGTCTGGGCCCTGTGCTCACTGATGGACACTCAGCAGCTGTGTCCCCTCTGGCCTGGCAGAGTTCTCTGAGCAGGGACCTGTGTATCGTCTCAACAGGTGCTTCCTCCCAGGACCTTGCAAGAAAAAAAACAAACCTTCCTCCTGCTTAGTCTGCAGAGTGAGGTGAGCTGCATGCCCAGGTCTCAAGGAGGGGCTGGGCAGTCCCTGGGTGGAAACACATTTGCATGAGCAGCCCCTCCTCTGCAGAGGGTGGGAAGAAAAGGAGGCCTGGGGCAGCCCAGTCCCACTGTGGGGTAAGAGGCTGTGTCCACCATGGCCTGGACTCCTCTCCTCCTCCTGCTCCTCTCTCACTGCACAGGTAGGAAAAGGCCTAACAGACCAGGGCCAGCACCTCAGCCTGATTCTGACTCTTCTGGCAAAGATCCCTAAAAAACTTTACCCTCCATTCTGCCTTATCACTCATAAATGCCTGTGTTTCTAGGTTCCCTCTCGCAGCCTGTGCTGACTCAGCCAACCTCCCTCTCAGCATCTCCTGGAGCATCAGCCAGATTCACCTGCACCTTGCGCAGTGGCATCAATGTTGGTACCTACAGGATATACTGGTACCAGCAGAAGCCAGGGAGTCTTCCCCGGTATCTCCTGAGGTACAAATCAGACTCAGATAAGCAGCAGGGCTCTGGAGTCCCCAGCCGCTTCTCTGGATCCAAAGATGCTTCAACCAATGCAGGCCTTTTACTCATCTCTGGGCTCCAGTCTGAAGATGAGGCTGACTATTACTGTGCCATTTGGTACAGCAGCACTTCTCACAGTGACACACACACATGGGGAAGTGGGACAAAAACCTCACCCTGCTCTCACTCTTGTTCTGTGACAATTTTCAAATTGTAAACTTAACTTGCCTATTTACAAAGTATATTTGGAAGTACTTTCTTGTGGTAACAGGCTTTTCTCTCCATTTCCCTTTCACTGCTTTTGAAGTCTGAGTAAAACAAAAACAAAACAAAACCACCTGATGACGCTAAACTGTTGGATGGTTGTCCGTATGTGCTAAAAACCAGTGCCTGTGGAGCTGGGCCTTTTTCTCTTGAGAGAAGCAAAATGTGCCTTTTCTAGCTCACATTGTAGTCAGAGCCTGAGAATATCCTAGCAGGTAAATAGTCCAGAGACCCGCTCTTCCATTTCCAGTAGTCTGTGCTCAGGGCTGTCCACGGCTCACTGTGTCCCAGGATCAAAGCACTAAAATGTAAAATGCTTCATGCGGATACAGTTCAGGGAGGAACTCCAGACATAAACCTGGCCTGGCCCAGTCCCAGGTACCTGCATTTCAGTTTCAATGTCAGGAGAGCTGATGAGGTGTGGGGGTAACTGGATCTGAGGCCAGGAAATCACTCTGTAGGACATGGGAGAATAAACGAGTAGGGGGTGGGGGTCTCCATCATGGCTTAGACAAAGCTGAGGCTGCTCCTGGGCCACTGGTAGAAGTAGGTTCCATGGATGAGACTTTCCTCCAGCTCATCCCACTCAGAATCACGGGAACTTCCGAGGGTGGTTTTCCTGAACTCTTGGGGTCTGACTGTATTATTTTCTCTTCTCTTACACCATTAGCTTTTCACTGAGTCAGAGTCTAGTCAGTGCAATATCTGGGTATAGAAACTGCCCAATATTTGCTTCAAGTGACTCCTCCCCATGAAACTCTTGAGGAGGCCTACAACTTGATGTCACCTTTTCCTGCATGGGGAGCAGCAGAAGCATTGGGCAGTCCCATGGAAATGGCTACTGAGGGCTCCCAGGGAGAACCCCTCTATTTGTGACCCAGGACAACAGTGATGGACCTTCAGGGATCCCAGCCTGATTCTCCTGCTCTGGCTTTGTCCACGTTGCCTCCATGACCAGCTCTGGGTTCTAGGCCGAGGACACGGCTGATTATAAGTGTCATCCAGCTGCATCCAGACTCCATATCACCAGAAGCTCCTGGTCCATGGAGAAGTGAGAGAAAGATTTGTTCCCAGCTCCTCCTGTCTTCCCCATCCCTCCTTTATCCCTGCCTGTGACCAACACCACTTCATGCCAAGGCTTCTGCTGTCACTTGTGTTACTGAAAGTGGAGCATGGGTTCAGTGAAGAGAACTTGTTTGTCCCAGTGGAAACAGAATCAATTTGTTTCTAGAAGCAAAAGGAGGAGGCTACCCATGGTGTGGATGAGGTGGGCATGACAAGAAAGAAGAATCCAGACTGTGAGACCCAGAGACCCAGGTGCCCTCTGCTTGGCCCCATAGGTGTCCTCTCCTTTGGTGGAGGTATGGTGGCCATTTCCTGAGCTCTGAGACTGTTGGAGAGATGACAAGAAAGGAGAACCCAGCCTGTGTGACCCAGAGACCCATATGTGAGAGTGGAAGTCTGATACTTAAGAAAACATGGAATCAACATTCTGAAAGCTTTGGCTCTGTCTTGGACTATGGCTGGTGTAGAAGAGAAGCAAGAGAGATGCTCAGCCTTGGGTGGCCCAGGCACAGCTGTCCTGTCAAGGGGCAGAGCTCTCTGCAATGTGGGTTTTCTGTAGAGATATGCTTAAGGAGGCTGCAGTTTAAGGATGATGCAAAAAAGCTATCTACAGTGAGCAGGGGATGGTTTATGGGGGAATGAGGCAAAAGGTATGGGGTCAGATGTGGTAAGGAGGGTGCAGCCTGAAGAAGAGACTGTCTTTGGGAGCCTTTTGAGGAGGAGTCCCAGGGCCCAGAGCAGTGACAAATAGAAAACCTGGAAGGGCCTGGGCCCTGGAGACACAGAGGCACAGGGTCTTGGGTCTGTTCTGGAGGGTCCCTGAAGAGGATGACATAACAAAACTACTATGGTCAGTGTCCTCTGTCCAGTGTTCCCGGTCCCAGCTACTGTCCCTTCCAGAGCCTCTGTGTGTCCAGGTTTCTCCCCTGAAGTTGCTTTCTCAGCACCAGCCCCCAGGAGCAGGTTCACCTTCTGTGCCCAGAGTGGGGCTTGCACAGCTGAGTGGAGAAGGCCAGATTTACAAGAATGTCCTGTGTCTGCCCATGTTGTAAGGGGTGGGTGAGCAAGTGGGGGCATTTGAGCTCCTCTAGGGACCTGAAAGAGCATAGGTCCTCCCCAAGACCTGGACTCCTTACTTCATCCCCCTCCCATCACTCTCCTCACTGCAGCTATGGCCAGGTGACAGCTCAGGGCTACTTGAGGACCTTGCACAGCCCAGGGCCTCCATCCCAGGCATTATCTCCAAACTCTGTAAGGGCTGTCTCTGAAACTGTAGAAACATTTATTTCTATGTGCCCAGGAAAGAGTTAGAGGGCACTGACCCAATCCCTTGCAAGCTGCTCATCAGCTGTCAGGGCCCTAGTGAGGAGAAGAAAGAGTTAGAAATCAGGAATCTACCCAGGGCTCCCCTATCTCCTCTCTCCTCTCTCCCAGCTACCACCTGGCTTCTTCTATCCAAAGAAATAAAGAGGAGGTGGCCACAGAGGGCAAGGGGAGGGCCAGGCAATATCCGAGGCAGCAGAGCCAGGCAGTCCCCCGGGGTGGTGTGGGGAGGTGCTGGAGGTGTCTGGGACCAGGGAATAGTGAGGACCCTCTTTCTAAAGTGAGGAGGGGTGGCATAAACTGAGGCCTAGATGGTGAACCAGATCTCCTGAGCCATCTACTCATTTTTTCTTCTGTTGCAGCCTGGGTAAGAATAGGACAAAAGAGTCTTTGAGGGGGTTTTTATTCCTCAGCTAAGAATCCTCAGAGGATTGACTCGGGAGTTGAGGGGAGACTGAGCCTCGCTCTCAGGCCAAAAGAGCTTGGGGCTTTCAAGGGAATTGGATAGAACTGAAGTTCCCAGACTCTGGCATCTAAGACGTAACCCCCTTCGCAAGCCCAGCACTGATACCAAAATGGAAGATGGCTGATAGATAAGTCTAGAAAAGCCTAGATGAAATAATCCTGGGGCTTAATCCTAAATCTAGAAAGAGAAGTGGGTTTTATGGTATAAAGCACAGTGAGGATTAGATCTTGAGTCTTAAGACTTGGGCTTGAAGTCAGACATGGTGGTGCGCACCTGTAGTCCCACGTTTTTGGGAGGCTCAGACAGAAGGATCTCTTACACCCGGGAGTTTGAAGTTACAGTGAGCTGTGATCACGCCACTGCACACCAGCCTGGGTGACAGAGTGACACTTTATCTCTAAACAAATAAACAAGCAATCTTGGGATTGTATCCTGGCATTTACTGGCCGTGTGGCCTTGGGCAACCCAAGTTTTCTTTCTTTCCTCACTTGAAAAATGGAAATAATGATGGAAATACCCACTTAGTAAAGGTGTTGGGAAGATGAAATGGGATTAACACAAAGTCACTCCATTGCTGTTAGGAGATGGAAGCTTAGATACTGGAGGCCAGAGTGCTTGAGGGGCTTGAGGAACTGAGAACACCCAATCTGGAGGCCAGACTGGTAGAGAGATGCTTGGGACAGCCTGAAGCCATAAAGGGCCTGATTCTGGGGGAGCGCCAGGGCCACGATGCACCAGGGCTGCTGGGGAGGGGCAGGGGCTACAAAACAATTAATTAATTAACTTGGTGTTTATATTGTTCTAGAATTTATTCCTCAGATGGGCAAATATTTTCACCTACCTTCCTACCTACCTACCTGTCTGTCTGCAGTCTGTCAGTGAGGGCCTGAGAGGAAGGTGAAGGCACAGACAGAGGATGGGCCAGAGGGCAGGTCCCAGTCATCCGGGAGCAGGCTCTGGTCAGCCAGGGAGGGAAAAGAGGGAGTAGCTCCTGGTGTCTTGGAGGCAAGCACTGCCCTGTCCCTGCTGGTCTTCCTGCTCTGCAGTCCCTAGGGGAGGCTCCTCAGGGAGGCTGAGTTCCAGGACTGTCTTGTAAACCACACAGTGAGCTGGGCAGGTGAGTCCAGGGCATGAGGGCTGTGTAGAGACCTGAGACTCAGATGCTTAGTGATATGGACACTGCCCAGCTCCATCCTATATGGAGAAGATAAAGTGGATAGTGAAGAAAGCCAGATACTCAGGCCTGTGTGGGCTTCAGACAGCAGAGGGTGCTGTGGGCTGACT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4985:HG3_PB_pbsv_19147:HG2_PB_SVrefine2Falcon1plusDovetail_7535:HG4_PB_pbsv_19401:HG3_Ill_SVrefine2DISCOVARDovetail_13593:HG4_Ill_SVrefine2DISCOVARDovetail_13391:HG2_PB_SVrefine2PBcRplusDovetail_6987:HG2_PB_SVrefine2PB10Xhap12_14226:HG2_10X_SVrefine210Xhap12_13555:HG2_PB_SVrefine2Falcon2Bionano_9634:HG3_PB_SVrefine2Falcon1Dovetail_12108:HG4_PB_SVrefine2Falcon1Dovetail_12107:HG3_PB_SVrefine2PBcRDovetail_9571:HG2_PB_PB10Xdip_19414;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13555:HG2_PB_SVrefine2PB10Xhap12_14226:HG2_PB_SVrefine2PBcRplusDovetail_6987:HG4_Ill_SVrefine2DISCOVARDovetail_13391;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0475;ClusterMaxSizeDiff=0.0473913;ClusterMaxEditDist=0.237157;PBcalls=10;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=9100;DistBack=5095;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=22:22752586-22752588;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3438.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:66:0|1:35:2:0:30:1|0:0:13:29:0:0/1:30:16:0/1:216:335:.:9358:.
chr22	22878217	HG2_Ill_SVrefine2DISCOVARplusDovetail_8014	C	CTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGTGCAAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTGTGTCTCAAAAAAAAAAATAGACGTGAAGGATGCAAAGATGCGTATGAGTGACAGTATGTCTAATCTCCTACTTTATGAATGGCCATTTTCAAATTTTATCATTCCTTCAATATTTATTAATTCTTTTGTAAAGAAGAATGTTGATTTGTCTATCAGTGTGGCACCAGGAAGATTTATGTTATTTAAAAATGTTATAAACAGATACTGTCATTATTTTTTTGATGCTTCAAATGTCAAGTGAGAGTCCCTTTACCATGCTCCCCATATCTTTATTTTTCCTTTTTTGAGAGAGAGAGTCATGATTATTCATTTATTTCACACCTGATTCTCATTACATCAGTCTGAGAGAGGAAGGAATCATGCACCAGCGCATACAATTGTGCTGTTCTATTATCCTTCAGACAGTATTGGGATCTAGGTTCTAGTTATTTTTAAATTCAGGGATCTGAATCAGAGCCCAAAGAGGTTGACTGCTGCTGCTGGGGACTGGGGGCTGCTGGGAGAACAGCAGAAAACAGGCATGGAGCTGACCCTGGACGGTTCATGCTCCAGAACTCCGATCTTGGTACCTGAGGATCTTTCACGGAGATCATGGACAGGGGTGTGACAGCAGTTCCTCAAAGCAAATGGGGATGGCAAACCTGGGGCTGGTACTTGGGAGTTGGAAAAACAACCATATTTGCACAAGGAGAAACTGAAAAACCGCTGTCCTTCCATCTGTATCCCAGAATCCTATGTAGAACCATGAGGACAGGGCCAGGGTTGGTTCCTTGGTCTCTGTTTGTCCTCATCAGTAGTCCAGTAGGAGTCCTGCAAACTTATCACCATCTGGAGACAGTGCTGCCAACTCTTCTTTATGCCCCACCGCTTGAGATGCTAGTCGATTGCTTTAGACTATTCATGATTCTTCTTCCTCAACTCTTCACATTAAAGAAATTCCTAGCCAGGTATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAGAAGTTGGAGACCAGCCTGGGCAACATGGCGAAACCCTGTCTCTACAAAAAAATAGAAAAATTAGCTGAGCGTGGTGGTGGGTGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGTAGGAGGATCACCTGGAACCTGGGAGGCAGAGGTTGCAGCTTGCCGAGATCACACCACTGCACTCCAGCCTCGGCAACAGAGTAAGACTGTCTCAAAAAAAAAAGGAAAGTAATTCCCGTTCTTTGATGAAACTCTGGATCTCCCGGTCATTCCGTGTTTTAATCAACTGTTCTCAGGGTTTTCTAGTTCCTTGGTTTCATAATTTCAGTCTCAAGTCTCACTTTCTCTGTTTTTATTCCTGAGTTTCCTCCTAAGGTTCTTTTCATTGCAGCCACAGGCCCTAGTCCAGGGTCTGCAGAGAGCTAGTACTTACTCTGCCCAAATGGAATCCAAGAACATCAGAAGGTGCCCGAAGGTGGAAATGTGTTTCTGCTCTCTGCTTTTGGCAGTCTTGCTCTCCATGTCTTTTTTGACATGCCCCCTGATATAGTTTGGATGTTGTAATCAACCAAATCTCGTGTCAAAATGTAACCCCTGATGTTGGACATGAAGTCTGGTGAGAGGTGATTGGATCATGGAGGTGGATTTCTCATGAATGGTTTAGTACCATCCTCTTGGTACTGTCCTCATGATAGTGAGTGGGTTCTCCTGAGACCTAATTGTTTTAAAGTGTGTGGCACCTCCCGCATCTCTCCTGCTCTGGCTATGATATAGCTATTATGGAAAGCAGTACGGTGGTTCCTCAAAATATTAAAAATAGAGCTACCATATGATTCAGCAATTCCATTTCTGGGTATATATCCGAAGGAAATGAAATCTATATGTTAAAGAGGTATCTTTACTCTCATGTACATTGCAGGACTATTCACCACAGTCAAGATGTGGAATCAACCTAAGTGTTCATGATGAATGGATAAAGATAGTGTGGTATGTATACACAATAAAATGGTATTCAGCCTTTCTTTCTTTCTTTTTTTTTTTTTTGAAACAATATCTTCCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGACGATCATAACTCACTGCCGCCTTGAACTCCTGAATTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAACTGGGACCACAAGTGCATGCCACCAACACCTGGCTAATTAAAAAACAAATTTCTGTAGGGACAAGGTCTCACTTTGTTGCCCAGGCTGGTCACAAATGCCTGTACTCAAGTGATCCTCCCGCCTTGGCCTCCCAAAGTGCTAGGATGACAGGCAAAAGCCACCATGCCTTACCACTATTCAGCCTTAAAATTCAGCCTTAAAATCAAAGGAAGTTCTGTTATTTGCAACAACATGGATAAACCTGGATGACATTATGTTAAGTGAAATAAGTCAGACATAGAGAGACCAATACACAGTGTCTCACTTATAGGTGGAATCTAAAAAAGTTAAACTCACAGAAGCAGAGAGTAAAATGGTAGTTATTAGGGTCAGGACGGGTAGAGGATGGGGAGAATAGGCTAAAAGGTACAAAGTTTCGGTTAAACAGGAGGAATTATTAGTTTTGGAGACCTAACATATAGTCTTACAGCATGGTGACTATAATTAATAATAATGTATAGTATATTTTAAAATTGCTGAGTGAGTAGATTTTGAATGTTCTCATCACAAAATTATAAATATGAGGTGATTGCTATATTAATTGGCTTGATTGATATGTTAATTGGCTTGATTTAATCATTACACAATGTGTGCACATATATTTATCATGTACATCATAAAATATATACAAATTGTCATCTGTCAATCAAAATTTTAAAAAAACATTGAAGATCTGGGCACTAAGTATGCTCAATTGTTATTGCTTCAGTAGACAGACCTAGAAAATACAGTGTACTCATATTTCCATTTAAATTTAGTGCCATGCCAGGGATTCTTCTTTCATTTAATTTTATTTATTTTTATTTTTATTTTTATTTTTTGAGACAGGGTCTCACTCTGTCTTCTAGGCTGGAGTGCAGTGGCGCAGTCTCGGCTCACTGCAACCTCTGCCACCCAGGTTCAAGTGATTCTCCTGCCTCAACCTCCCCAGTAGCTGGAATTATAGGTGCATACCACCACGCTCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGATCTTGAACTCCTGACCTCAGGTGATCTGCCCATCTCGGCCACCCAAAGTGCTAGGATTACAGGTGTGAGCCCTTGTGCCCGGCCCCTTCCTTCATTTTATATTTTTATATATACTATACTCAAGTGATCCTCCTGCCTCGGCCTCTGACATGGTTTGGCTGTGTCCCCACCCAAAGCTCATTTTGAATTGTAGCTCCCGTAATTCCCACGTGTTGTAGGAGGGACCCAGTGGGAGATAGCTGAGTCATGAGGGAGGTTTCCCCCATACTGTTCTCATGATAGTGAGTAAGTCTCATGAGATCTGATGGTTTTCTAAGGGGTTTCCCCCTTTCACTTGGCTCTCATTCTCTCTTGCCTGCTGCCATATAAGATGTGTCTTTTGCCTTCCACCATGATTGTGAGGCCTCCCCAGCTACGTGGAACTCCAAGTCCATCAAATTTATTTTTCTTTATAAATTACCCAGGCTCAGGTATGTCTTTATCAGCAGTGTGAAAATGGACTAATACAGCCTCCCAAACTGCTAGGCTTACAGGCAAAAGCCACCATACCTGGTGACTATTCAGCCTTAGAATCAAAGGAAATTCTGTTATTTGCAACAATATAGATAAACCCAGTTGGCATTATGTTAAGTGAAATAAGCCAGACATACAGAGATAAATACACAGTGTCTCACTTTAATTTTTTTTAATTAAATTTTTTGTACAGATGGTGTCTCGCTATATTGCCCAAGCTGGTCACCAATTCCTGGATTCAAGTGATCCTCCTGCCTTGACCTCCCAAGTGCTTGGATTACAGGCATGAGCCACTGTGCCTGGCCTATTTATATTTTTAAATCCCATCATTCTTATTGTAAGACAAGTACAAGAATCTCTCCTAAGTCTAAATGTATTAGGTCATTCTTGCATTGTTATAAAGAAATACCTGAGACTGGGTAATTTATCAAGATGTTTAATTGGCTTACAGTTCTGTGGGCTGTACAGGAAGCATAGTGGCATCTACTTGTGGGGAGGCCGCAGGCAGCTTACAATCATGACAGAGGGTGAAGGGGAGCAGTCATGTCGCATGGTGAAAACAGGAACGACAGAGCAAGAGGGGAGGTGCTACACACTTTTAAACAACCAGATCACTGAGAACTCACTCACTATTGGGAGAATAGTACCCAGGGGGATGGGTGCTAAACCATTCATGAGAAATCACACCCAGGATCCAGTGGCCTCTCGCCAGGCCCCACCTCCAACAGTGGGAATTACATTTCAATATGAGATTTCCGTGGGCAAACACATCCAAACTATATTATTCTGCCCCTGGACCCGCCCAAATCTCATGTCCTTCTCATATGTCAAAATACAATCATGCCTTCCCAATAATCCCCCGAAGTCTTAACTTATTCCAGCATTAACTCAAAAGTTCAAAGTCTTATCTAAGACAAGGCAAGACTCTTCCACATATGAGCCTATAAAATAAAAAATAAGTTAGTTACTTCCAAGATACAACGGGGATACAACCATTAGGTAAACATTCCCATTCCCAAGGGAGAAATCAGCTAAAAGAAAGGGGCTACAGGCCCCATGCAATTCTGAAACCCAGCAGGGCTGTTGTTAAATCTTAAAGCTCCATAATAATCTCCTTTGACTCCATGTCCCACATCCAGGACACACTGATGCAAAGGGTGGGCTCCCAAGGCCCTAGGCAGCTCCATCCCTGTGGCTTTGCGGGGTTCAGCCCCACCCCTGTGGCTATGCGGGGTTCAGCCCCTGCCACTACTCTCATGGGCTGGCATTGAGTGCCTGAGGCTTTTCCAGGCACAGGGTGCAAGCTATGGGTGGATCCACTACAGCTCCACTAGGTAGTGCCCCAGTGGGGACTCTGTGTGGCAGCTCCAACCCCACATTTCCCCTCCACACTGCCCCAGTAGAGGTTCTTTGTGAGGCTAACATTTTGTTTGTTTGTTTTTTGAGAGAGGGCCTTCCTCTGTCTTCCACCCTGGAGTGCAGTGGCATAATCATGGCTCACTGCAGGCTTGAACTTCTGGGCTCAATAGATCCTCCCACCTTCCACAGTGCTGGGTTTACAGGCATGAGCCACTACGCCCAGCCAAAACGCGTGCACATTCTTACGTCAACCTAATAACAGAGAGAAGCTCTTTAAAAGAAAATGATGTGTGTTTGGCAATAGAGCATTGCAATGAAAATATGTATGCCCCTATGTGTGCATTTGGGGAGGTAAAGGAAGACAAAGGTTTTTAAAGGAAGGATAAGAAGGATTACATAATTGTTTTGAGATAATTTTCCTTGACTGCAAAGATCAATAGCAAGGGTGACGCTAGTCCAAGGTTGGAGAGGCAGTTGCTGGGCAGATGCCCTTATGGAAGTATTTTTTGCTTAAGGTTGCGATGTCCTTTGTACAAGGTTGTTTCTGTAGAGTCTTTTGTCATTGTTTTTGTTATCAGGTATGCAAGCGTGAAACACTCTCTTCATGGCCTTCCCAGGCTCTGTTTGTCAAGTTTTGCTTTGTTGTTGTTGTTGTTTTAACATTAGTGGCTCCATTTTGATTCTGACAACTTTCACACTTCTAAGTTAGAGTTTAGAAAATATTCTGTTACTGGCCAGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGAAAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGTGAAACCCTGTCTCTACTACAAATACAAAAAAAAAAAATTAGCCGGGCATGATGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGGTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCGCACCACTGCACTCTAGCCTGGGCAACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGAAAAGAAAATACTCTTACTTTTTTTTCCTAAAAATGTATTTTAATTTCTCTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTATGAGATGAAGTCTCACTCTGTGGCGCAGGCTAGAGTGCTGTGGTGCGATCTCAGCTCACTGCAAACTCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCGCCCCCATGCCTGGCTAATTTTTGTATTTTTAGTAAAGACAGGGTTTGCCATGTTGTCCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCACTCGCCTTGGGCCCCCAAAGTGTTGCAATTATAGGGGTGAGACAACAGGCCCAGCTTTTTTTTTTTTCTTTTTATACTGGATTTTAAAAAACTAGGAACAGAATTCTTAAAGTCAAATGCTTATAAGGGCCGAGCATCAAACACATTTGCAGCATAGGGTAAAAGAGAAATGAGCCCTTGGAAAATAGAAGCATGCAACAGTCTTTCAAGGATGTTAATGGTACTACTCAATTTTATCTGATTTCTGCCTGATGGCAATGCTGGTGTTGCTGATCTATTTTCCAAGCAACACTGGAAATTTAAATTTTTATGTTGACTCTCAATTTTAAAGTGCCAGAAAGTATATATTTTTAAGTTTTAAAGCATAATGAAGCCAAATAAAGCACATCTGTGTGTTGATTTGAACTGTGAATTGCCTGTACCCCAATCTGGCTTAATGAGATGTGTATTTTACACTTCACTAGTTTCTGAACTTAAGGTGAGTGGCACATGCAGAACTTAAGGCGAGGGGCACATGCAGAATGATGTGGTCCCTAACTGCCCACGGAAGTGTCTCTAGTGATTGCAGCAGCTTAATCTAAGAGTTATCCCAACTTTCATCTTCATCCCAAATATTTTAGTATAGTATTTTAGTATAGACATCCCTCACTATCTGAAGGGGATTGAATACCAGCATCCTTGGATACTCGAACCTCTTATATAAAATGGCCTAGGATGGCCGGGTGCCGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACAGTGAAACCCCATCTCTACTAAAAAACAGAAAAAATTAGCTGGATGTGGTGGTGGGCACCTGTAGTCCTAGCTACTCCGCAGGCTAAGGCAGGGGAATACGGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATCTCAAAATAAATAAATAAATAAATAAAATGGCCTAGAATTTGCATATAACCAACACACATCCTCCCATATACTTTATTTTTATTTATTTATTTATTTATTTATTTATTTTTGGAGATGGAGTCTCTCTCTGTCATCCAGGCTGGAGTGCAATGGCATAATTTCAGCTCATTGCAACCTCCACCTCCCGAGTTCAAGCAATTCTCCTACCTCAACCTCCCAAGTAGCTGGGACTACAATCATGAGCCACCATGCCCTGCCACCCTCCCATATACTTTAGATCATCCCTAGATTACTTATAATACTTAGGACAATGTATTATAGTTGTTGTTTTGAGACAGAGACTCACTCTGTCCCCTAGGCAGGAGTGCAGTGGCACGATCATGGCTCATTCCAGCCTTGACCTCTTGAGCTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTATCTAGGACTACAAGCATAAGCCACCATGCCCGGCTAGCCTTTTTTTTTTTTTTTTCTCTCTCTTTTTTGGAAGAGACGAGTTCTCACTGTATTGTCCAGGCTGGTCTTGAACTCCTAGGCTCAAGCAATCCTCTGGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGCTAGCCACTGAGCCCGGCAATACCTACAACAATGTAAATGCTATGTAAATAGTTGTCATATTGTATTGTTTTTAAATTTGTATTATTTTTAATTGTTGAATTGTTATTATTATTTTTTGAAGTATTTTCAATCCACAGTTGGTTGAATCCTCAGATGAGGAACTCATGAGGTGTGGAGGGCCGGCTGTATATTGTTCAGCAAGTCAACTAATCTAAGACGTTTAAGCTTGTGGTTCTCATCGTGCTACAGATTCAAACTGCCCAACCCTACCCCAGGTCAGTTAGATTAAAACTTAGAGTAGTCCCTTTTCAGATCCTGAATGGATCCATGTGCCCTCCACCTGACAAAAGGCTAGTGGTGAGGGTTGAGGGGAAGTACCTTTTTTCCACCTCCCACTTCACAGGAGAAGGCTTTTGTTTCACTGTTTTCAGATTATTTTTATTTATTTATATTTTATTTTTTGAGACAGGGCTCACTCTATCACCATGCAGTGGCGTGATCACAGCTCACTGCAGCCTCAATCTTCCAGGGCTCCCCAGTAGCTGGGACCTGCAGGCATATGCCACCACGCCCGGCTAATTTTTGTATCTTTCGTAGAGATGGGATTTCACCATGTTACCCGGGCTGATCTCCAACTCCTGGGCTCAAGCAATCCTCCTGCCTTGGCCTCCCAAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTTTTGAGACGGAGTCTTGCTCTGTCCCCCAGACTGGAGTGCAGTGGCAAGATCTCGGCTGACTGCAAGCTCCGCCTCCCGGGTTCACCGTATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGACTACAGGCACCTGCCACCATGCCCAGCTAATTTTTTTTTTTTTTGGTATTTTTAGTAGAGACGGGGTTTCACGGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCAGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCCAGCCGTGTTTTGTTTTTTTAAGACAGGCTCTTGCTCTACTGCCAGGCTCTAGGGTGCAATGACAGCTCACTGTAGCCTCAACCTCCCGGGCTCAAGCGATCCTCCCACCTCAGGGTCCCAAGTAGTGGGAACCACAAAAGTGGACCACCACACCTGGCTATTCATTTGATTCTTAACCCAGACAAATTAAATTGGTATTTCCAGAGGTGGGACCCAGGAGTATGTATTATGAAAGCTCCCAGATGTCTAATGAGCAGCATGGCTGGAAAACCACTGCTCTTGATGGCCCTGGCCCCTGCTCAGCTGTCACCAAGTAAAGCACCCGGTGTGAATGAAGCCCTCACCATCAATCTCTATGATGGGCTGAATTGTGCTCCCCTCAATTCCTATGTTGAAATGCTAACCCCTGGTACCTCAGAATGCAACCATATTTGGAGATAAGGCCTTTAAAGAGGTCATGAGGCCATTATGGTTGGCTCTGATTCTATCTGACAATACCCTTATAAGAGGAGGAAACATGGAGACACAGGCAGACACCAGGGATGCAAACACATAAAGGAAAGGTCAGTTGCAAGCAACAGAGAGAAGGCCTTGCAAGAAACCAAACCTGCCAACACCTTGATCTCTGACTTCCAGCCTCCAGAGTGGTGAGAAAATAGACATCTGTTGTTTAAGCTGCCCATTCTGTATGTTATGGCAGCAATATCAAACTAATACACTCTGCAAAATGAGAGCCACCTCATGCATAGGTAGGGGGTGTGCAGGGATAGCTCAACTCCCAGGTGACTCCGGGACACAAACAAATGCCCTTAGTGGGGGTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTCCGGAATTGGGGTATTGCTCTGTTGCCTAGGCTGTAGTGCCATGGTGTGATCACAGTTCACTGCAGCCTCGATTTCTGAGCTCAAACAATCCTCCCACCTCAGCCTCCCAAGTAGGTGGACTATAGGAACGTGCCACTATGCCTGGCAAAATTTTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTCAGAGATGGGAGTCTCACTCTTTTGCCTTGGCTGTTCCCAAACTCCTGGCGTCAGTTGATTTTCCTGTCTCTGCCTCTGAAAGTACTGGGATTATAGGTATGAGGCCCCCACACTTGTCCAAGGGTTTTTTTTTTTTTATTGTACCAATCTACCCTGATTTTCCAAGAAACAGCTTTCTCCCACTTTGGGGTATTTCCTAGAGACCAGTGCTGGTAGAGACTCCCTCTCAATTCTCTTTCTGGCCCCAACTCCCTTGATTTCTCTCCTAAACTGTGAGGGACAAAACCTTGAGGATGGAGAGAGATCAATTTTCACACTGTTTCAAAAGCTAGGGAAATATCTGTGTTCTGTCTGGTATAGGTAAGAAAATAATAAAAACAAATGATAACTGTATATTAGAATGGTCTGAAAGCTGATGGCCTAATATAAAAAAAGACCATACAATGTGAAGTTATGAAGAAGCAGAGGGCGTAAGTTCAACATGGTCTACAGATGCTGGGCAGGTCTGCTGGGGCGAGATTGCTACTTACCCAAGGTGGTTTCCATGGAGAAGGACAAGATGCTTTCTGCAGACTGAGTGGAGAGAAGACAAACTTTTCAGTTAGGCTTTGGGCCTGTAGCCAGTAATGTGAGTAGAGGGAGAATTTAAAAAGGGGAGTCTATTATTATTCAGTTTTCTCCACTTCTAGATGGTCTACACTATGAGCCTTGGACATGTGGGCTCCCTGAAGCCAGGGAGAGGAATGTCTAGTTCTGACTTTAGGAAAGCCAAAATTGGGATTGGGGTCTTGGAGCCACCTCTTACCAGTCAATATGGGGATACTCCCAGGCAGCAGGCTGGGCTCAGGAAACTACGTGCTCTCTTCCTTCTTCCTCCGGGAGTCCCATGTGTACCCGTTGTTTACCTCCAACATGTAGGTGAGAACATGCAGTATTTGGTTTTCTGTTGCTGAGTTGGTTCACTTAGGATAGCGGCCTCAAGCTCTATCCATGTTGCTGCGAAGGACATGACTTCATTCTTTTTTGTGGCTGCCTAGGACATTCTTAGATGACAAATTATGGCGACCCATGTTATCCCTAGCTCCTTCTGTCAAGAAAAAAAAGGGGTGGTCAGAGGCAGCCTCCAACTTTAATGGGTACTGCAAGGAAGAAGACTGGAGAACCGGTGACAGAAATGTACTCTGCTGGGTCAAGTGATTTAGCTGATTTTTACCACTGCAAGGCTGGAGGAGACTGAGGCTTTGGGTAAATGCTCAGTCACTACCAGGTGGATTAAGGAAAAAACTCCAAGTAACAGTAATGAATCATCGGAGTAGAGGAGAAAAACTCCAAGTTATATCTAACACTGAAATCCTGAAATTGCATGTGTCTCTTCAGTGATTAGGAATGCATTACTATCAGCTATTGAATAAATACCTTATTTCGTACAAGTTTTTATTAATTTAAAAACAAGGCTGCAGCAAACCACCATGGCACGTGTATACCTATGTAACAAACCTGCACGTTCTGCACATGTATCCCAGAACCTAAAGTATAATAATAATAATAATAATAAAAAACAAGGCCAGGCATGGTGGCTCACACCTGCAATCCAAGCACTTTGGGAGGATTGCCTGAGCTCAGGAGTTCGAGACCAGCCTGGGCGACATGATAAAAATCCCATG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12109:HG2_PB_PB10Xdip_19415:HG2_PB_SVrefine2Falcon1plusDovetail_7536:HG3_PB_SVrefine2PBcRDovetail_9572:HG2_10X_SVrefine210Xhap12_13556:HG2_Ill_SVrefine2DISCOVARplusDovetail_8014:HG4_Ill_SVrefine2DISCOVARDovetail_13392:HG2_PB_SVrefine2PB10Xhap12_14227:HG2_PB_SVrefine2PBcRplusDovetail_6988:HG2_PB_SVrefine2Falcon2Bionano_9635:HG4_PB_SVrefine2Falcon1Dovetail_12108;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8014;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00327566;ClusterMaxSizeDiff=0.00243442;ClusterMaxEditDist=0.0122627;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=11924;DistBack=26691;DistForward=22269;DistMin=22269;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=156;REFWIDENED=22:22878218-22878373;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9995;PctRecOverlap=0.9908;SizeDiff=-6;StartDistance=-107;EndDistance=-107;GTMatch=0;TruScore=99;MatchId=3439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:97:1/1:1:17:0:13:./.:0:0:0:0:1/1:0:33:1/1:1:834:.:11612:.
chr22	25153604	HG2_PB_assemblyticsfalcon_16638	C	CACACACACACACACACATATATAAAATATGTATATATTACACACACACACACACAT	10	PASS	ClusterIDs=HG4_PB_pbsv_19420:HG2_PB_assemblyticsfalcon_16638:HG2_PB_HySA_35101:HG4_PB_HySA_27929;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsfalcon_16638;NumExactMatchSVs=1;ClusterMaxShiftDist=0.146341;ClusterMaxSizeDiff=0.146341;ClusterMaxEditDist=0.206349;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=56;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=22:25153603-25153606;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3440.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:7:61:1/1:3:20:1:16:./.:2:31:10:10:0/1:14:12:./.:.:.:.:.:.
chr22	25226662	HG2_PB_SVrefine2Falcon1plusDovetail_7553	AA	GGGCTAAGTGTATGGAGAGGGTCCCCAAACAAGAGCTGTGGCTGCCAAGTCTCTTCCTTCCTTAAGGAAGCTTGAGGTAGCTGGTTTTATATCCACTCCCACCTTCCTTTTTTCATTGTTGTTTCACTCTCCCTCTCT	20	PASS	ClusterIDs=HG4_PB_pbsv_19421:HG4_Ill_GATKHCSBGrefine_13054:HG2_Ill_GATKHCSBGrefine_12612:HG2_PB_HySA_35104:HG4_Ill_manta_4339:HG4_Ill_Cortex_2218:HG2_PB_assemblyticsfalcon_16640:HG2_PB_SVrefine2Falcon1plusDovetail_7553:HG2_Ill_SpiralSDKrefine_10449:HG2_Ill_Cortex_5252:HG2_10X_SVrefine210Xhap12_13576:HG2_PB_SVrefine2PBcRplusDovetail_7002:HG2_PB_PB10Xdip_19435:HG2_PB_SVrefine2Falcon2Bionano_9649:HG4_PB_HySA_27933:HG4_Ill_MetaSV_3185:HG2_Ill_MetaSV_3073:HG2_PB_pbsv_19492;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13576:HG2_Ill_Cortex_5252:HG2_Ill_SpiralSDKrefine_10449:HG2_PB_SVrefine2Falcon1plusDovetail_7553:HG2_PB_assemblyticsfalcon_16640:HG4_Ill_Cortex_2218:HG4_Ill_manta_4339;NumExactMatchSVs=7;ClusterMaxShiftDist=0.121212;ClusterMaxSizeDiff=0.120755;ClusterMaxEditDist=0.218868;PBcalls=9;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=136;DistBack=-2;DistForward=-1;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=22:25226664-25226661;PctSeqSimilarity=0.9929;PctSizeSimilarity=0.9855;PctRecOverlap=0.9856;SizeDiff=-2;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=3441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:42:./.:17:27:18:7:1|0:1:37:16:0:0/1:21:10:./.:.:.:.:.:.
chr22	25832628	HG3_Ill_GATKHC_30298	G	GGTCTGCTCACTTGTGGACTGGACACAATTCCTTCTAGGCTGCCGGGGGGAGGATGACAA	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_12614:HG2_PB_HySA_35114:HG2_PB_PB10Xdip_19447:HG3_Ill_GATKHC_30298:HG2_Ill_GATKHC_30386;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12614:HG3_Ill_GATKHC_30298:HG2_Ill_GATKHC_30386;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.0677966;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=59;DistBack=11;DistForward=46;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=243;REFWIDENED=22:25832488-25832730;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3443.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:39:0|1:19:0:4:37:./.:5:1:7:0:./.:15:1:./.:.:.:.:.:.
chr22	26216012	HG2_Ill_SVrefine2DISCOVARplusDovetail_8036	G	GAACTGTTATCATCACCATCACCATCATCATCACCACCACATCATCATCATCACCATCAGCACCATCATATTGCCACCACTATCACCATCATCATCACTACCATCACCATCACCACCATCATCACCACCACCATCACCATCACCACCATCATATCACCACCACCATCACCACCACCACCATCATCACCATCACTATCATCATCATCATTATCACCATCATCATCACCATCATCACCACCATCACCATCATCACCATCATCATCACCATCATCGCCATCACCACCATCATCATCATCACCATCGCCACCATCATCACCATCATCGCCATCACCACCATCATCACCATCACTATCATCATCATCACCATTATCACCACCATCATCACCATCATCACCACCATCATCATCATCATCATCACACCATCATCACCACCACCATCACCATCATCACCATCATCATCATCACCACCATCACCATCATCATCACCATCATCACCATCACCACCACCATCACCACCATCATCACCCCATCATCATCACAACCACCACCATCATACCCTCATCATCACCATCATCACCACCATCACTATCACCACCATCATCATCACCACCATCACCATCATCATACCGTCATCAGCACCATCACCATCATCACACCACCACCATCACCATCATCATCACCATCATCATCACACCATCATCACCACCATCACCATCATCATCACACCATCACCACCACCATCACCACCACCATCACCATCATCACCATCACCATCATCATCACCATCACCCCATCATCACCATCATCATCATCATCATCACCATCACCCCATCATCACCATCATCATCACCATCACCCCATCATCACCATCATCATCATCATCATCACCATCACCACCACCATCATCACCATCATCATCATCATCACACCATCACCCCATCATCACCACCATCACCCCATCATCACCATCATCATCATCATCACCATCACCCCATCATCACCATCATCACCATCACCATCACCCTATCATCACCATCATCATCATCATCACCATCACCACCACCATCATCACCATCATCATCATC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4989:HG3_PB_SVrefine2PBcRDovetail_9590:HG3_PB_pbsv_19173:HG2_PB_pbsv_19498:HG3_Ill_SVrefine2DISCOVARDovetail_13610:HG4_PB_pbsv_19425:HG4_PB_SVrefine2Falcon1Dovetail_12125:HG4_PB_assemblyticsfalcon_16321:HG2_PB_assemblyticsfalcon_16654:HG3_PB_assemblyticsfalcon_16575:HG2_Ill_MetaSV_3075:HG4_PB_SVrefine2PBcRDovetail_9800:HG4_Ill_SVrefine2DISCOVARDovetail_13408:HG2_PB_SVrefine2PBcRplusDovetail_7005:HG2_PB_SVrefine2PB10Xhap12_14250:HG2_PB_SVrefine2Falcon2Bionano_9652:HG2_PB_SVrefine2Falcon1plusDovetail_7557:HG2_Ill_SVrefine2DISCOVARplusDovetail_8036:HG4_Ill_MetaSV_3187:HG3_PB_SVrefine2Falcon1Dovetail_12121:HG2_PB_PB10Xdip_19448;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8036:HG2_PB_SVrefine2Falcon1plusDovetail_7557:HG2_PB_SVrefine2Falcon2Bionano_9652:HG2_PB_SVrefine2PB10Xhap12_14250:HG2_PB_SVrefine2PBcRplusDovetail_7005:HG4_Ill_SVrefine2DISCOVARDovetail_13408:HG4_PB_SVrefine2PBcRDovetail_9800;NumExactMatchSVs=7;ClusterMaxShiftDist=0.214025;ClusterMaxSizeDiff=0.214025;ClusterMaxEditDist=0.274838;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=1084;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1;REFWIDENED=22:26216013-26216013;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3444.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:74:1/1:1:26:2:19:1/1:0:22:0:12:1/1:0:22:./.:19:295:.:1221:.
chr22	28007178	HG2_Ill_250bpfermikitraw_25270	G	GCGCGAGATTAACCCGTCCCGCACTGCGTCTCACGCGAGATTAACCCGTCCCGCACTGCGTCTCACCTGAGATTAACCCGTCCCGCACTGCGTCTCA	20	PASS	ClusterIDs=HG3_PB_pbsv_19179:HG2_PB_assemblyticsfalcon_16678:HG2_PB_SVrefine2Falcon1plusDovetail_7562:HG2_PB_pbsv_19503:HG3_PB_HySA_29007:HG3_Ill_GATKHC_30336:HG3_Ill_GATKHCSBGrefine_12456:HG2_Ill_250bpfermikitraw_25270;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25270:HG3_Ill_GATKHCSBGrefine_12456:HG3_Ill_GATKHC_30336;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0615385;ClusterMaxSizeDiff=0.0507614;ClusterMaxEditDist=0.23;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=96;DistBack=16416;DistForward=52;DistMin=52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=154;REFWIDENED=22:28007122-28007275;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3446.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:23:0|1:31:5:4:13:./.:4:0:2:10:0/1:15:8:./.:.:.:.:.:.
chr22	28776037	HG2_PB_SVrefine2PB10Xhap12_14256	C	CAAAACGTTAACATTAGGGGGCGGTGGCTCACGCCTGTAATCCAGCACTTTGGGAGGCGAGGCGGGGATCCGAGTCAGGAGATCGAGACCATCCGGCTAAACGGTGAAACCCGTCTCTACTAAAATACAAAAAATTAGCCGGCGTAGTGGCGGCGCTGTAGTCCAGCTACTGGAGCTGAGGCAGGAGAATGGCGTGAACCCGGAGGCGAGCTTGCAGTGAGCCGAGATCCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4990:HG2_PB_pbsv_19505:HG3_PB_pbsv_19182:HG2_PB_HySA_35155:HG2_PB_assemblyticsfalcon_16683:HG2_PB_SVrefine2PB10Xhap12_14256:HG2_PB_SVrefine2Falcon1plusDovetail_7564:HG4_PB_SVrefine2Falcon1Dovetail_12133:HG2_PB_HySA_35154;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14256;NumExactMatchSVs=1;ClusterMaxShiftDist=0.155763;ClusterMaxSizeDiff=0.155763;ClusterMaxEditDist=0.19375;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=306;DistBack=13;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=22:28776038-28776052;PctSeqSimilarity=0.9549;PctSizeSimilarity=0.9134;PctRecOverlap=0.9164;SizeDiff=-29;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=92;MatchId=3449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:45:./.:0:2:4:0:0|1:22:0:0:6:0/1:28:7:0/1:9:16:.:.:.
chr22	29958336	HG2_Ill_GATKHC_30441	T	TACCTCATGTGTTGAGGTGGCAAGGACATCCAGAGATGCTAATTTATGCATC	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13599:HG2_PB_pbsv_19513:HG4_PB_HySA_27989:HG4_PB_pbsv_19443:HG4_PB_SVrefine2PBcRDovetail_9811:HG2_PB_HySA_35170:HG4_Ill_svaba_23609:HG4_Ill_manta_4343:HG4_Ill_Krunchall_25889:HG4_Ill_GATKHC_30364:HG4_Ill_GATKHCSBGrefine_13067:HG4_Ill_250bpfermikitraw_24891:HG4_Ill_150bpfermikitraw_23918:HG2_PB_SVrefine2Falcon1plusDovetail_7570:HG2_Ill_svaba_23710:HG2_Ill_SVrefine2DISCOVARplusDovetail_8057:HG2_Ill_Krunchall_25579:HG2_Ill_GATKHC_30441:HG2_Ill_GATKHCSBGrefine_12621:HG2_Ill_250bpfermikitraw_25286:HG2_Ill_150bpfermikitraw_23762;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13599:HG4_PB_SVrefine2PBcRDovetail_9811:HG4_Ill_svaba_23609:HG4_Ill_manta_4343:HG4_Ill_Krunchall_25889:HG4_Ill_GATKHC_30364:HG4_Ill_GATKHCSBGrefine_13067:HG4_Ill_250bpfermikitraw_24891:HG4_Ill_150bpfermikitraw_23918:HG2_PB_SVrefine2Falcon1plusDovetail_7570:HG2_Ill_svaba_23710:HG2_Ill_SVrefine2DISCOVARplusDovetail_8057:HG2_Ill_Krunchall_25579:HG2_Ill_GATKHC_30441:HG2_Ill_GATKHCSBGrefine_12621:HG2_Ill_250bpfermikitraw_25286:HG2_Ill_150bpfermikitraw_23762;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.245283;PBcalls=6;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=51;DistBack=52538;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=56;REFWIDENED=22:29958337-29958392;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3450.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:35:./.:19:14:9:14:./.:1:12:15:0:0/1:19:25:./.:.:.:.:.:.
chr22	30072937	HG4_Ill_GATKHCSBGrefine_13068	C	CCAGCACCCAGATCAGAAAACAGGACATCCCTGGCACCCAAGGAGCCTTCTCT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13601:HG4_PB_pbsv_19444:HG4_PB_HySA_27990:HG2_PB_HySA_35172:HG4_Ill_svaba_23610:HG2_PB_pbsv_19514:HG4_Ill_SVrefine2DISCOVARDovetail_13422:HG4_Ill_Krunchall_25890:HG4_Ill_GATKHC_30365:HG4_Ill_GATKHCSBGrefine_13068:HG4_Ill_250bpfermikitraw_24892:HG4_Ill_150bpfermikitraw_23919:HG2_PB_SVrefine2Falcon2Bionano_9661:HG2_Ill_svaba_23712:HG2_Ill_SVrefine2DISCOVARplusDovetail_8058:HG2_Ill_Krunchall_25580:HG2_Ill_GATKHC_30443:HG2_Ill_GATKHCSBGrefine_12622:HG2_Ill_250bpfermikitraw_25288:HG2_Ill_150bpfermikitraw_23764;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13601:HG4_Ill_svaba_23610:HG4_Ill_SVrefine2DISCOVARDovetail_13422:HG4_Ill_Krunchall_25890:HG4_Ill_GATKHC_30365:HG4_Ill_GATKHCSBGrefine_13068:HG4_Ill_250bpfermikitraw_24892:HG4_Ill_150bpfermikitraw_23919:HG2_PB_SVrefine2Falcon2Bionano_9661:HG2_Ill_svaba_23712:HG2_Ill_SVrefine2DISCOVARplusDovetail_8058:HG2_Ill_Krunchall_25580:HG2_Ill_GATKHC_30443:HG2_Ill_GATKHCSBGrefine_12622:HG2_Ill_250bpfermikitraw_25288:HG2_Ill_150bpfermikitraw_23764;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.275229;PBcalls=5;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=52;DistBack=79076;DistForward=27243;DistMin=27243;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=22:30072938-30072997;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:32:1|0:3:27:35:3:./.:2:10:9:0:0/1:35:33:./.:.:.:.:.:.
chr22	30993332	HG2_10X_SVrefine210Xhap12_13603	T	TTGGAGAACCTTTATGTCTAGCTAAGGGATTGTAAATACACCAATCAGCACTCTATATGTAGCTCAAGGTTCGTAAACACACCAGTCAGCACCCTGTGTCTAGCTCGGGGTTTGTGGATGCACCAATCGGCACTCTGTATCTGGCTAATCTGGTAGCAATG	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_13626:HG3_PB_SVrefine2PBcRDovetail_9602:HG3_PB_HySA_29030:HG3_PB_pbsv_19188:HG2_PB_HySA_35181:HG2_PB_pbsv_19516:HG2_PB_PB10Xdip_19459:HG2_Ill_breakscan11_4992:HG3_PB_HySA_29029:HG4_Ill_manta_4345:HG2_Ill_manta_5138:HG2_Ill_MetaSV_3082:HG2_Ill_GATKHCSBGrefine_12626:HG4_Ill_MetaSV_3195:HG4_Ill_GATKHCSBGrefine_13072:HG3_Ill_manta_4164:HG3_Ill_MetaSV_3241:HG3_Ill_GATKHCSBGrefine_12461:HG4_PB_pbsv_19447:HG3_PB_HySA_29028:HG4_PB_HySA_27999:HG2_PB_HySA_35180:HG3_PB_SVrefine2PBcRDovetail_9601:HG2_PB_SVrefine2PBcRplusDovetail_7017:HG2_PB_SVrefine2PB10Xhap12_14263:HG2_PB_SVrefine2Falcon2Bionano_9662:HG2_PB_SVrefine2Falcon1plusDovetail_7571:HG2_Ill_SVrefine2DISCOVARplusDovetail_8063:HG2_10X_SVrefine210Xhap12_13603:HG4_PB_SVrefine2Falcon1Dovetail_12138:HG3_PB_SVrefine2Falcon1Dovetail_12133;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13603:HG2_Ill_SVrefine2DISCOVARplusDovetail_8063:HG2_PB_SVrefine2Falcon1plusDovetail_7571:HG2_PB_SVrefine2Falcon2Bionano_9662:HG2_PB_SVrefine2PB10Xhap12_14263:HG2_PB_SVrefine2PBcRplusDovetail_7017;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0668693;ClusterMaxSizeDiff=0.0547112;ClusterMaxEditDist=0.25;PBcalls=18;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=160;DistBack=22616;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=365;REFWIDENED=22:30993333-30993697;PctSeqSimilarity=0.9791;PctSizeSimilarity=1;PctRecOverlap=0.5155;SizeDiff=0;StartDistance=-78;EndDistance=-78;GTMatch=0;TruScore=83;MatchId=3452.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:65:1/1:1:21:3:31:./.:2:4:0:4:1/1:2:23:./.:.:.:.:.:.
chr22	31019714	HG2_PB_SVrefine2Falcon1plusDovetail_7572	T	TATGTATACATATATATACACATATATATGTATACATATATACACACATATATGTATACATATATATACACACATATACACATATATACACACACATACATATATACACACACATATATACACACATATATACACACATGCACACATATATATGTATACATATATACACACATGTATACGTATATATACACACATATATACACACATATATATACACACATATACACACATACACACACATATATACACACATATATACACACATATATACACACATATATATGTATACATATATATACACACATATATACACATACACACATACATATATACACATATACACATATATACACACATATACACACATGTATACATATATATACACAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8064:HG2_PB_SVrefine2PBcRplusDovetail_7018:HG2_PB_SVrefine2PB10Xhap12_14264:HG2_PB_SVrefine2Falcon1plusDovetail_7572:HG2_PB_SVrefine2Falcon2Bionano_9663;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7572:HG2_PB_SVrefine2PB10Xhap12_14264:HG2_PB_SVrefine2PBcRplusDovetail_7018;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0577164;ClusterMaxSizeDiff=0.0577164;ClusterMaxEditDist=0.0677541;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=386;DistBack=15;DistForward=42;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=353;REFWIDENED=22:31019715-31020067;PctSeqSimilarity=0.9599;PctSizeSimilarity=0.9461;PctRecOverlap=0.665;SizeDiff=-22;StartDistance=-126;EndDistance=-126;GTMatch=0;TruScore=85;MatchId=3453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:69:./.:4:12:1:48:1/1:1:62:0:17:1/1:0:28:1/1:1:152:.:.:.
chr22	31622449	HG2_Ill_SVrefine2DISCOVARplusDovetail_8070	A	AAAGTGCTGGAATTACAGGCGTGAACCACTGTGCCCAGCCAAGAGTTGTTTTTAGTGTGGTTGGCAGAGCCAGCTCTTCCTCACCACAGGATGCCTCCCTAGGTTCCTACTTTTTGTTACTAGCTTTATTATAGCTATATTATTATTATTATTATTATTATTATTATTATTATTATTATTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGTGTACAGTGGTGCGATCCCGGCTCACTGCAACCTCTGCCTCCCGAGTTCAAGCAGTTCTCCTGCCTCAGCCCCCCGAGTAGGTGGGACTACAGGCGCCTGCCACCACACCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTGACCAGGCTGGTCTCGAGCTCCTGACCTCAGGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12140:HG4_PB_pbsv_19452:HG4_PB_HySA_28005:HG2_PB_pbsv_19520:HG3_PB_HySA_29040:HG2_PB_pbsv_19519:HG3_PB_SVrefine2Falcon1Dovetail_12137:HG2_PB_HySA_35194:HG2_PB_PB10Xdip_19465:HG2_PB_SVrefine2PBcRplusDovetail_7019:HG2_PB_SVrefine2Falcon2Bionano_9664:HG4_PB_SVrefine2PBcRDovetail_9814:HG2_PB_SVrefine2PB10Xhap12_14266:HG2_10X_SVrefine210Xhap12_13604:HG4_Ill_SVrefine2DISCOVARDovetail_13429:HG3_Ill_SVrefine2DISCOVARDovetail_13629:HG2_Ill_SVrefine2DISCOVARplusDovetail_8070;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8070:HG3_Ill_SVrefine2DISCOVARDovetail_13629:HG4_Ill_SVrefine2DISCOVARDovetail_13429;NumExactMatchSVs=3;ClusterMaxShiftDist=0.094176;ClusterMaxSizeDiff=0.086741;ClusterMaxEditDist=0.323601;PBcalls=13;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=399;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=384;REFWIDENED=22:31622450-31622833;PctSeqSimilarity=0.9988;PctSizeSimilarity=1;PctRecOverlap=0.9799;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=99;MatchId=3454.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:38:1/1:4:15:1:9:./.:0:32:2:17:1/1:3:44:./.:4:45:.:.:.
chr22	31751836	HG2_Ill_SVrefine2DISCOVARplusDovetail_8072	C	CGATCTGCCTGCTTCGGCTTCCCAAAGTGCTGGGATTACAAGTGTGAGCCACCACACCCGGGGGCACCCACTGAAATGACCAGATATCTCTCTCTCAAGAATTCAGAGATTTCGGCTGGGCGAGGTGGCTCACGCCTGTAATCCCAGCATTTTGGGAGACTGAGGCGGGCAGATCCCGAGGTCAGGAGATCGAGACCATCCTGACTAACACGGTGAAACCCGTCTCTACTAAAAATACAGAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGAAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCGCTGCGCGCTCCAGCGCAGCCTCCTGAGTAGCTGGGACTACAGGTACATGCTACCACATCTGGCTAATTTGTGTATTTATTTATTTATTTTTGGAGACGGAGTCTCGCTCTGTCGCCCAGCCTGGAGTGCAGTGGCGCGACCTCGGCTCGCTGCAAGCTCCTCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGACTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTTTCGATCTCCTGACCTCGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12141:HG3_PB_assemblyticsfalcon_16627:HG3_PB_HySA_29041:HG4_PB_pbsv_19453:HG4_PB_HySA_28006:HG2_PB_pbsv_19521:HG3_PB_pbsv_19192:HG4_Ill_GATKHCSBGrefine_13075:HG3_Ill_MetaSV_3243:HG3_Ill_GATKHCSBGrefine_12466:HG2_Ill_GATKHCSBGrefine_12630:HG4_Ill_manta_4347:HG4_Ill_MetaSV_3198:HG2_Ill_MetaSV_3084:HG2_PB_SVrefine2Falcon1plusDovetail_7574:HG2_PB_PB10Xdip_19466:HG2_PB_assemblyticsPBcR_16184:HG4_Ill_SVrefine2DISCOVARDovetail_13431:HG3_PB_SVrefine2PBcRDovetail_9605:HG3_PB_SVrefine2Falcon1Dovetail_12138:HG2_PB_SVrefine2PBcRplusDovetail_7020:HG2_PB_SVrefine2PB10Xhap12_14267:HG2_PB_SVrefine2Falcon2Bionano_9665:HG2_Ill_SVrefine2DISCOVARplusDovetail_8072:HG3_Ill_SVrefine2DISCOVARDovetail_13632:HG4_PB_SVrefine2PBcRDovetail_9815:HG2_10X_SVrefine210Xhap12_13606;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8072:HG2_PB_SVrefine2Falcon2Bionano_9665:HG2_PB_SVrefine2PB10Xhap12_14267:HG2_PB_SVrefine2PBcRplusDovetail_7020:HG3_PB_SVrefine2Falcon1Dovetail_12138:HG3_PB_SVrefine2PBcRDovetail_9605:HG4_Ill_SVrefine2DISCOVARDovetail_13431;NumExactMatchSVs=7;ClusterMaxShiftDist=0.225879;ClusterMaxSizeDiff=0.225879;ClusterMaxEditDist=0.288706;PBcalls=16;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=667;DistBack=-50;DistForward=50;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7659;REFWIDENED=22:31761644-31751887;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9985;PctRecOverlap=0.991;SizeDiff=-1;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=3455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:1:31:1:14:./.:1:14:0:15:1/1:0:32:1/1:5:103:.:.:.
chr22	32299114	HG2_PB_SVrefine2PBcRplusDovetail_7023	T	TACCTAAACCCCCAACCTTCCACACCTAAACCCCCACCTTCTGTACCTCTACGTTCCACACCTAACCCCCCTCCACCTTCCACACCTAACCCCCTCCACCTTCCACACCTAACCCCCTCCACCTTCCACACCTAAACCCCCCTACGTTCCACACCTAAACCCCCCCACCTTCCACACGTAAACCCCCTCCACCTTCCACACGTAAACCCCCGCCTTCCACACCTATTCCCCCACCTTCCACACCTAAACCCCCCACCTTCCATACCTAAACCCTCCCACCTTCCACACCTAAACCCCCACCTTCCACACCTAAACCCCCTTATCTTCCACACCTAAACCCCCACCTTCCACACCTATTCCTCAACCTTCCATACCTAAACCCCCCCACCTTCGAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12140:HG3_PB_HySA_29045:HG2_PB_SVrefine2PB10Xhap12_14271:HG2_PB_HySA_35202:HG4_PB_pbsv_19458:HG3_PB_HySA_29044:HG3_PB_pbsv_19195:HG2_PB_HySA_35201:HG4_PB_HySA_28008:HG3_PB_SVrefine2PBcRDovetail_9607:HG2_PB_SVrefine2Falcon1plusDovetail_7576:HG4_PB_SVrefine2Falcon1Dovetail_12144:HG4_PB_SVrefine2PBcRDovetail_9817:HG2_PB_SVrefine2PBcRplusDovetail_7023:HG2_PB_SVrefine2PB10Xhap12_14270:HG2_PB_SVrefine2Falcon2Bionano_9668;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7023;NumExactMatchSVs=1;ClusterMaxShiftDist=0.141509;ClusterMaxSizeDiff=0.136792;ClusterMaxEditDist=0.274005;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=394;DistBack=39241;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=568;REFWIDENED=22:32299115-32299682;PctSeqSimilarity=0.949;PctSizeSimilarity=0.9206;PctRecOverlap=0.366;SizeDiff=-34;StartDistance=-255;EndDistance=-255;GTMatch=0;TruScore=74;MatchId=3456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:1:20:2:13:./.:16:304:13:304:./.:2:0:0/1:2:17:.:.:.
chr22	33961550	HG3_PB_SVrefine2PBcRDovetail_9615	A	AGAGGACCTAGTCATCACGCGACACTCTTCACCTGACAGCAATAGAGGACACACACATAGGACAGAAGGAGGACCTAGTCATCACGTGACACTCTTCACCTCCTAGTCAAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7584:HG4_PB_pbsv_19471:HG4_PB_HySA_28024:HG3_PB_pbsv_19209:HG3_PB_HySA_29062:HG2_PB_HySA_35223:HG2_PB_pbsv_19536:HG2_PB_PB10Xdip_19480:HG3_PB_SVrefine2Falcon1Dovetail_12150:HG2_Ill_GATKHCSBGrefine_12638:HG2_Ill_150bpfermikitraw_23792:HG4_PB_SVrefine2PBcRDovetail_9826:HG4_PB_SVrefine2Falcon1Dovetail_12154:HG3_PB_SVrefine2PBcRDovetail_9615:HG3_Ill_SVrefine2DISCOVARDovetail_13644:HG2_PB_SVrefine2PBcRplusDovetail_7028:HG2_PB_SVrefine2PB10Xhap12_14278:HG2_PB_SVrefine2Falcon2Bionano_9676;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9676:HG2_PB_SVrefine2PB10Xhap12_14278:HG2_PB_SVrefine2PBcRplusDovetail_7028:HG3_Ill_SVrefine2DISCOVARDovetail_13644:HG3_PB_SVrefine2PBcRDovetail_9615:HG4_PB_SVrefine2Falcon1Dovetail_12154:HG4_PB_SVrefine2PBcRDovetail_9826;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0969163;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.318966;PBcalls=15;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=110;DistBack=-109;DistForward=-1;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=176;REFWIDENED=22:33961551-33961726;PctSeqSimilarity=0.9975;PctSizeSimilarity=1;PctRecOverlap=0.2252;SizeDiff=0;StartDistance=-86;EndDistance=-86;GTMatch=0;TruScore=74;MatchId=3457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:1:66:1/1:0:24:0:11:./.:4:9:4:3:0/1:11:14:./.:.:.:.:.:.
chr22	34430598	HG3_Ill_MetaSV_3248	T	TCAAATGGAACTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAATGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4994:HG2_PB_pbsv_19538:HG3_PB_pbsv_19211:HG3_PB_HySA_29067:HG4_PB_assemblyticsfalcon_16393:HG3_PB_SVrefine2PBcRDovetail_9617:HG3_PB_SVrefine2Falcon1Dovetail_12152:HG2_PB_HySA_35229:HG3_Ill_SVrefine2DISCOVARDovetail_13650:HG3_Ill_MetaSV_3248:HG3_Ill_GATKHCSBGrefine_12476:HG2_Ill_MetaSV_3090:HG4_PB_SVrefine2Falcon1Dovetail_12156;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_MetaSV_3090:HG3_Ill_GATKHCSBGrefine_12476:HG3_Ill_MetaSV_3248:HG3_Ill_SVrefine2DISCOVARDovetail_13650;NumExactMatchSVs=4;ClusterMaxShiftDist=0.225309;ClusterMaxSizeDiff=0.225309;ClusterMaxEditDist=0.271605;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=328;DistBack=31960;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=22:34430599-34430612;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:43:0|1:21:1:2:33:1|0:0:8:15:0:0/1:25:11:0/1:10:49:.:.:.
chr22	34759007	HG2_Ill_Krunchall_25620	T	TGGGGTTTCCCCGTGTTAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCTCCCGTAGAGAC	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_13451:HG2_PB_HySA_35231:HG4_Ill_scalpel_17480:HG4_PB_pbsv_19473:HG4_Ill_Krunchall_25929:HG2_PB_pbsv_19540:HG4_Ill_GATKHC_30413:HG4_Ill_GATKHCSBGrefine_13090:HG4_Ill_FB_16015:HG4_Ill_250bpfermikitraw_24928:HG4_Ill_150bpfermikitraw_23957:HG2_Ill_scalpel_17901:HG2_Ill_SpiralSDKrefine_10512:HG2_Ill_Krunchall_25620:HG2_Ill_GATKHC_30494:HG2_Ill_GATKHCSBGrefine_12642:HG2_Ill_250bpfermikitraw_25323:HG4_PB_HySA_28030:HG4_PB_SVrefine2PBcRDovetail_9827;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25323:HG2_Ill_GATKHCSBGrefine_12642:HG2_Ill_GATKHC_30494:HG2_Ill_Krunchall_25620:HG2_Ill_SpiralSDKrefine_10512:HG2_Ill_scalpel_17901:HG4_Ill_150bpfermikitraw_23957:HG4_Ill_250bpfermikitraw_24928:HG4_Ill_FB_16015:HG4_Ill_GATKHCSBGrefine_13090:HG4_Ill_GATKHC_30413:HG4_Ill_Krunchall_25929:HG4_Ill_scalpel_17480;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0757576;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.328358;PBcalls=5;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=-1;DistForward=2087;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=65;REFWIDENED=22:34759000-34759064;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:19:0|1:26:0:1:18:0|1:16:0:1:14:0/1:22:25:./.:.:.:.:.:.
chr22	35207306	HG3_Ill_250bpfermikitraw_24596	A	AGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	20	PASS	ClusterIDs=HG3_Ill_FB_16148:HG2_PB_pbsv_19544:HG2_PB_PB10Xdip_19487:HG3_PB_pbsv_19216:HG2_PB_assemblyticsPBcR_16219:HG3_Ill_Krunchall_25152:HG2_PB_HySA_35247:HG4_Ill_Krunchall_25940:HG4_Ill_GATKHC_30426:HG4_Ill_GATKHCSBGrefine_13091:HG4_Ill_250bpfermikitraw_24940:HG2_Ill_Krunchall_25630:HG2_Ill_250bpfermikitraw_25332:HG3_Ill_GATKHC_30418:HG3_Ill_GATKHCSBGrefine_12481:HG3_Ill_250bpfermikitraw_24596:HG2_Ill_Krunchall_25629:HG2_Ill_GATKHC_30502:HG2_Ill_GATKHCSBGrefine_12643:HG2_Ill_FB_16190:HG2_Ill_250bpfermikitraw_25331;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25331:HG2_Ill_FB_16190:HG2_Ill_GATKHCSBGrefine_12643:HG2_Ill_GATKHC_30502:HG2_Ill_Krunchall_25629:HG3_Ill_250bpfermikitraw_24596:HG3_Ill_GATKHCSBGrefine_12481:HG3_Ill_GATKHC_30418:HG3_Ill_Krunchall_25152;NumExactMatchSVs=9;ClusterMaxShiftDist=0.218487;ClusterMaxSizeDiff=0.218487;ClusterMaxEditDist=0.25641;PBcalls=5;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=60;REFWIDENED=22:35207283-35207342;PctSeqSimilarity=0.9661;PctSizeSimilarity=0.9333;PctRecOverlap=0.9344;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=94;MatchId=3460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:38:./.:0:0:0:1:./.:0:0:0:0:1/1:1:48:./.:.:.:.:.:.
chr22	36026290	HG2_PB_pbsv_19552	G	GAGAGAGGAGGAGGAGGGAGGAAAGAGAAGGCCGAGGAGGAGGAAGAGGAGGAGGAGGGAGGGAGAGGAACGGGAGGAGAGAGGAGGAGAGAGTGAGAGGAGGAGGAGCGAAGAGGGGAGGAGAGGAAAGGGGAAGGAAAGAGGGGAGAGGAGTCAGAACGAGGGGAGAAGAGAGGAAGACGGAGAGGAGGAGGAGGGAGGAGAGGAAAGGGAGAGAAGAGGGAGGAGGTAGGAAGAGGGGGAGGAGGAGGCAAGAGGGAGGAGGAGGAAGAGGGGGAGGAGTTAGGAGCGTTGGAGCAGAGGAGGGGAAGGAAGGAGGAGGGGAAGGAGAAAGAGGAGGAGGGGAGGAGGAGGGAAGGAGCGAGGAGGAGAGGAGGAGGAGAGGAGAGGAGGAGAGGAGGAGGAGGAGAGGAGGAGGAGGAGAGGAGGAGAGGAGAGAGGAGGAGGAAGAGTGGTGGAGGAGAGGAAGAGAGGGAGGAGGAGAGGAAGGGTGTAGAAGGGGAGGAACGAGGAGGAGGAGAGAGGGAGGAATTTGAGGGGAGAGAGGAGTGAGGGGGAGGAAGAGGAAGAGGGGACGGAGGAACGAGGAGGAGGAGGAAGAGGGGAGGCAGGAGGAAGAGGGGGAGGAGGAAAGGAGAGGAGGAGGAGTAGGGGTGGCCAGCCAGAGGAGGGGAGGAGAGGAGGGCCGGAAGGGAAAGAGGAGGAGGGAGGAGAGGGGAGGAGGAAAGGAGACGAGAGGAGGGAGGAGAGGAGGAGGAGGGAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12165:HG4_PB_pbsv_19483:HG3_PB_HySA_29089:HG2_PB_pbsv_19552:HG2_PB_SVrefine2PB10Xhap12_14290:HG3_PB_pbsv_19225:HG2_PB_SVrefine2Falcon2Bionano_9685:HG2_PB_SVrefine2Falcon1plusDovetail_7594:HG2_PB_SVrefine2PBcRplusDovetail_7038:HG3_PB_SVrefine2PBcRDovetail_9625:HG3_PB_SVrefine2Falcon1Dovetail_12161;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_19552;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0620872;ClusterMaxSizeDiff=0.0581242;ClusterMaxEditDist=0.240995;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=762;DistBack=-142;DistForward=0;DistMin=-142;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=172;REFWIDENED=22:36026264-36026435;PctSeqSimilarity=0.923;PctSizeSimilarity=0.9882;PctRecOverlap=0.9869;SizeDiff=9;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=96;MatchId=3461.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:39:1/1:1:18:0:12:./.:33:19:14:6:./.:3:2:0/1:8:29:.:1102:.
chr22	36027676	HG4_Ill_GATKHCSBGrefine_13099	A	AAGAAAACACATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9686:HG4_PB_pbsv_19484:HG2_PB_pbsv_19553:HG2_Ill_breakscan11_4997:HG2_PB_HySA_35272:HG2_PB_SVrefine2Falcon1plusDovetail_7595:HG3_PB_SVrefine2Falcon1Dovetail_12162:HG4_Ill_MetaSV_3211:HG4_Ill_GATKHCSBGrefine_13099:HG4_PB_SVrefine2PBcRDovetail_9836;NumClusterSVs=10;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_13099:HG4_Ill_MetaSV_3211;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0559006;ClusterMaxSizeDiff=0.0559006;ClusterMaxEditDist=0.194529;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=317;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=22:36027677-36027691;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9937;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3462.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:13:21:0|1:13:0:0:17:1|0:0:9:16:0:0/1:38:8:./.:4:48:.:1102:.
chr22	36069813	HG2_PB_PB10Xdip_19496	AGGC	CGGGCGCGGTGGCTCACGCCTGTAATCCAGCACTTGGGAGGCGAGGGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCGGCTAAACGGTGAACCCGTCTCTACTAAAATACAAAAAATTAGCCGGCGTAGTGGCGGCGCCTGTAGTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCGGAGGCGGAGCTTGCAGTGAGCGAGATCCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGA	10	PASS	ClusterIDs=HG2_PB_HySA_35273:HG2_PB_pbsv_19554:HG4_PB_pbsv_19485:HG2_PB_SVrefine2PB10Xhap12_14292:HG2_PB_PB10Xdip_19496:HG4_PB_assemblyticsfalcon_16419:HG2_PB_SVrefine2Falcon1plusDovetail_7596:HG2_PB_SVrefine2Falcon2Bionano_9687:HG4_PB_SVrefine2Falcon1Dovetail_12166:HG4_PB_HySA_28053;NumClusterSVs=10;ExactMatchIDs=HG2_PB_PB10Xdip_19496:HG2_PB_SVrefine2PB10Xhap12_14292;NumExactMatchSVs=2;ClusterMaxShiftDist=0.134375;ClusterMaxSizeDiff=0.134375;ClusterMaxEditDist=0.172727;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=296;DistBack=0;DistForward=7265;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSINS;BREAKSIMLENGTH=0;REFWIDENED=22:36069817-36069812;PctSeqSimilarity=0.948;PctSizeSimilarity=0.897;PctRecOverlap=0.9063;SizeDiff=-34;StartDistance=10;EndDistance=13;GTMatch=0;TruScore=91;MatchId=3463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:1|0:1:18:27:1:1|0:0:9:15:0:0/1:29:7:0/1:16:25:.:.:.
chr22	36713098	HG2_Ill_250bpfermikitraw_25348	A	AATCTCATCAAAATAAGGCAGCAGTCTACGGCCATACCACCCTAAACGCGCCCG	20	PASS	ClusterIDs=HG2_PB_HySA_35280:HG2_PB_PB10Xdip_19506:HG4_Ill_GATKHC_30448:HG4_Ill_GATKHCSBGrefine_13100:HG4_Ill_250bpfermikitraw_24963:HG3_Ill_GATKHC_30442:HG3_Ill_250bpfermikitraw_24617:HG2_Ill_GATKHC_30523:HG2_Ill_GATKHCSBGrefine_12653:HG2_Ill_250bpfermikitraw_25348;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25348:HG2_Ill_GATKHCSBGrefine_12653:HG2_Ill_GATKHC_30523:HG3_Ill_250bpfermikitraw_24617:HG3_Ill_GATKHC_30442:HG4_Ill_250bpfermikitraw_24963:HG4_Ill_GATKHCSBGrefine_13100:HG4_Ill_GATKHC_30448;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.0952381;PBcalls=2;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=53;DistBack=28;DistForward=27396;DistMin=28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=173;REFWIDENED=22:36712999-36713171;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3464.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:22:0|1:30:7:2:15:./.:10:0:7:4:0/1:19:7:./.:.:.:.:.:.
chr22	37259655	HG3_Ill_SVrefine2DISCOVARDovetail_13670	A	AGCTGTGGCCTTTGCACTTGCCGCTCCCCCTGCCTGAAATGCCTTTTCTGCCGTCCTGCAACCAACTCCTCTTTGCTCTTCCCGGCTGATCACTGGTGCTGCTGCTTCTGGGAAGCCCTCCTTGACCACCCTCAGCCCAAGGATGCCCTCTGACGGCGCATGAGCCTCCACAGTACAAGCTCCTGCTCCCAATCTCTCCTGTCTGCTGCATGATTGATTATTTGAGGGAATATAATAATGGCCAGGCTCCTGTTCTAGTTCAAAATGCCACGTGCTTTTCCTTCCCAGCACTATGCCCATTTGAATTATGTCATTATTTGTTTAGTGTCCAGTGTCCCCTTCCCTTCTCCTTGGAGCTGTGAGATCTGAGAAGCCCATATGTCTTAATGGGCTTAGAACAGTGTCTGGCCCACAGGCAGTGCCACATACAGGTTCGCTAAAATTATAATTATTTTAGACGGAGACACAGGCTGAGAAGGGCTGGGAATTTTTTAAGTTCACACAGCAAGTTGCCGGGAGGCTCAGAGTGCAGGGCAGTATGGCAGTGTTTGGTGACAAATTTCTGGAGCCAGACTGCTACTGCTTGGGCTCAAATCCCAGCTTCCCGACTTACTCGGGCTAATTTTACTGTGCCTCAGTCTCCCGATCTGTACAAAGGTGACACTGTCTTAGAAGAGCACCTGGCACCCTCAGGAAACAGGCAGCTGCCATTCTTATTACCCAACCTGCCTGCCGCCCTGCTCAGGGCCGTTTCTACCCTTTAGGTTCCTTCCTGTGTGCCCCCCACCCCCACCTTCCCACCTGATCGTACTGCAGAGGAAATTACCTAGGACAAGCACAGCCTCAGGGGAGAAAGTGGAGGAGGAAGCTTCTCCCAAGGGTATCACCACAGGGGCATGTGTGGAAAGTGAGTGGGGCTGGGAGGGGGGATTTCCACTACCTGCCCACTGCTATCCTGAGTCACCTCCATGTGGCAGCCCCCTGAATTCTGATGCAGCCTCAGATTCTAGGTCATGTGGGTCCGGCGTGGACTGGGACTACTGTGTGTAGACTCCGGAGGTCCCAGCCAGCTCTGGGGCCTTGGACTTGGCAGCCCTTGCAATCCCCCAACCACCGCCGCCCCCCCACCCCCGCCACTGTTTCCCCTGTTTCCCAATTGCCGCACCAGAAGAATCATAGTTGCTTCTTGTTTCCTTGTCTGTCTCCAAGTGGCTGGACTCAGTGACCACTCAGAGACTCCTGGCTGTGCCTTCTCCTGCTCCTTGGAAGTCTGTTTCTTCTTCCCCTATCTGTCCCTCTCAGACCCCTCCTCTGTTCCCTGATAGGTCTTCACTGAGTCAAGAGCGGGGGTCTTAGCCACAAGCCACAGGCAGAAGGTTATTCCTGCCTCACCACTTTTAGTCGAGACCTCGAGACCCCCATGCTGAGATCCTGAGCTATAAAGCAGGCCTCTCAAATTAGCATGCCCCAAACTGAGTCCATCAACTCTGCCCCGTGTCCCCATCCTGGCCAGAAGTGTGGGTGTCACTCTTGACAGTGCCTTTTCTTTCACCTCCACATCCAAACAGTGCCCAACCTCTCCTGATCATGACTTAGGAACAACAAGAAATTGGTAATGTGTCTGTTGGAAATGCATTAGGCTGCAGGGAATGGAGGAACTGACCATGGCTTAAACAAACAGGGGATTATTTGGTCACCTAACAAGAAGTCCACTTTGGGAGGCTGAGGTAGGTGGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGCAACCCTGTCTGTACTAAAAATACAAAAATCATCTGGGTGTGGTGGCTTGTGCCTGTAATCCAAGCTACGTGGGAGACTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCTAAGCTCGCACCACTGCACTCCAGCCTGGGGGACACAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGTCCAGAGGTAAGCCATAGTTGGTTCTGTAGGCCAGTGACAACAGGACTAGCACCCCAGAGATTCCTTTGGCCTTTCTCGTGTCTTGCCTCATGGAGACAACATAGCTGCTGTAGGTCTGGATGTCACACTTGCTTCAAGACTGCTTTCAAAGGGGGAGACCATGCTGAGCTTGTCCATCCCTTGGGATCAGGAAAGCAAGCACTCTGGGGAGGCTCCTACACCAGGCTTCCTCTTAGGTCTCATTGGCCAGAACTGGTCACATGGTTGCTCCTAGCTGCAAGGGAGGCAGGAAAACAGGAGCTGGATGGTGATGTTTGGCTCAGACCCGTCATGATCTATCACCTTGGGGCTAGGCACATGGCCACTCTGAACAAAACCAGTGCTTGGTTAGCCAGGAAGAAGCAGAGGATACAGTAAATGCTCACAGTGTCCACCAAGGTTGGTGGCCCTTGTGTCTATCTCCTCCTGTCCCTGCTGTCTGGCTCACATGCACACAATCTCTTAATCAGACCACTTCAGGACCTCCCAGTGGTGCTCTCTCCCCTAAGTCTCCACCCATTCTTTCCTCCCCACACACCTGCCTGAGCTGGCCCCTAAAGCCAAAATTGTATTTATGTTTTACTTTCTTTCTTTCTTTCTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCCCCAGGCTAGAGTGCAGTGGCATGATCTTGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTTAGCCTCCCAAGTAGCTGGGATGATGGGTGTCATTTTTTTATATTGCCTGCCTCAGCCTCCCAAAGTTCTGGGATTACAGGCATGAGCCACCATTTTACTTTCTTCCAAAGTATGTTTTACTTTCTTCTGAAGCCCTACATGACTCCCCATTGCCTACATAAGTTCCCTACTTGGCCCTTGGGACCCTCAGACTGGCCTCACCTGCCCACTCAGTCTCAGATCACACTGGCCCCAGCCATACAGATCCGGGCCCACTCCGCAGGTCATGCTGCTCCCACTGCCTGGAAGACCCTCCCCAATTTCTACCTGGCAGATGCCTATTCTACCCTCTAGACCTGCTCACATGTCATCTCCTTTTTGAGGATTTCCCCAACCTGGGCACAATTAGGCAGTCTCTCTATGGGGGTCCCATAGC	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_16251:HG3_PB_pbsv_19234:HG2_PB_pbsv_19564:HG4_PB_pbsv_19494:HG2_PB_PB10Xdip_19510:HG2_Ill_breakscan11_4998:HG3_PB_SVrefine2PBcRDovetail_9632:HG4_Ill_SVrefine2DISCOVARDovetail_13465:HG3_Ill_SVrefine2DISCOVARDovetail_13670:HG4_PB_SVrefine2PBcRDovetail_9841:HG3_PB_SVrefine2Falcon1Dovetail_12168:HG4_PB_SVrefine2Falcon1Dovetail_12175:HG2_PB_SVrefine2PBcRplusDovetail_7048:HG2_PB_SVrefine2PB10Xhap12_14303:HG2_PB_SVrefine2Falcon1plusDovetail_7604:HG4_PB_assemblyticsfalcon_16431;NumClusterSVs=16;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_13670:HG4_Ill_SVrefine2DISCOVARDovetail_13465;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0624613;ClusterMaxSizeDiff=0.0624613;ClusterMaxEditDist=0.17705;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=3145;DistBack=3457;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3;REFWIDENED=22:37259656-37259658;PctSeqSimilarity=0.9998;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:60:0|1:21:0:0:36:0|1:17:0:0:7:0/1:18:23:0/1:98:148:.:3033:.
chr22	37355073	HG2_PB_SVrefine2Falcon1plusDovetail_7605	A	ATGGATGGATGGATGGATGAGTGGGTGGGTGGATGGATGGATGGATGGATGGATGGATGGATGAGTGGGTGGATGGATGGGTGGATGGATGGATGGATGGATGAGTGGGTGGATGGATGGGTGGATGGATGGATGGATGGATGAGTGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGTGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGTGTGGATGGATGATGGATGTGTGATGGATGGATGGATGTGTGGATGGATGGATGGATGGATGTGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGAGTGGGTGGATGGATGGATGGATGGATGAGTGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGAGTGGGTGGATGGATGGATGGATGAGTGGGGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGAGTGGGTGGATGGATGGATGGATGGATGGATGGATGAGTGGGTGGATGGATGGATGGATGGATGAGTGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGAGTGGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12169:HG2_PB_pbsv_19565:HG4_PB_pbsv_19495:HG3_PB_pbsv_19235:HG2_PB_SVrefine2Falcon1plusDovetail_7605:HG2_PB_SVrefine2Falcon2Bionano_9693:HG2_PB_SVrefine2PBcRplusDovetail_7049:HG2_PB_SVrefine2PB10Xhap12_14304:HG4_PB_SVrefine2PBcRDovetail_9842:HG3_PB_SVrefine2PBcRDovetail_9633:HG4_PB_SVrefine2Falcon1Dovetail_12176;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7605;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0870968;ClusterMaxSizeDiff=0.0870968;ClusterMaxEditDist=0.190323;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=625;DistBack=12766;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=148;REFWIDENED=22:37355074-37355221;PctSeqSimilarity=0.9709;PctSizeSimilarity=1;PctRecOverlap=0.9024;SizeDiff=0;StartDistance=-61;EndDistance=-61;GTMatch=1;TruScore=95;MatchId=3466.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:23:1:17:./.:6:52:4:29:0/1:3:12:./.:7:80:.:.:.
chr22	37493663	HG2_PB_SVrefine2PB10Xhap12_14305	C	CAGTGAGCCACCATCCTGTAACAGAGGGGCAGGAGTGGCCACCGTCCTGTAACGGAGGGGCAGGAGCGGGCCACCGTCTTGTAACAGAGGGGCAGGAGCGGGCCACCGTCCTGTAACGGAGGGGCAGGAGCGGCCACTGTCCTGTAACGGAGGGGCAGGAGTGGGCCACCGTCCTGTAACGGAGGGGCAGGAGCGGCCACCGTCCTGTAACGGAGGGGGAAGAGCGGGCCACCGTCCTGTAACGGAGGGGGAGGAGAGGGCCACCGTCCTGTAACGGAGGGGGAGGAGAGGGCCACCGTCCTGTAACGGAGGGGGAGGAGAGGGCCACCGTCCTGTAACGGAGGGGCAGGAGCGGGCCACCGTCCTGTAACGGAGGGGCAGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12170:HG4_PB_pbsv_19496:HG2_PB_HySA_35292:HG4_PB_HySA_28066:HG2_PB_pbsv_19566:HG4_PB_SVrefine2Falcon1Dovetail_12177:HG2_PB_SVrefine2PBcRplusDovetail_7050:HG2_PB_SVrefine2PB10Xhap12_14305:HG2_PB_SVrefine2Falcon1plusDovetail_7606:HG4_PB_SVrefine2PBcRDovetail_9843:HG2_PB_SVrefine2Falcon2Bionano_9694;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14305:HG2_PB_SVrefine2PBcRplusDovetail_7050;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0930818;ClusterMaxSizeDiff=0.0930818;ClusterMaxEditDist=0.228005;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=381;DistBack=3079;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=512;REFWIDENED=22:37493664-37494175;PctSeqSimilarity=0.9631;PctSizeSimilarity=0.9203;PctRecOverlap=0.188;SizeDiff=-33;StartDistance=-320;EndDistance=-320;GTMatch=1;TruScore=69;MatchId=3467.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:71:1/1:3:21:1:8:./.:0:3:0:2:./.:0:1:0/1:2:9:.:.:.
chr22	37622940	HG2_PB_SVrefine2Falcon2Bionano_9696	A	ACACCCCTCCCACGCCATACACCCCTCCCACGCCATACACCCTCCCGTGCCATACACCCCTCCCACGCCATACACCCCTCCCACGCCATACACCCTCCCTCCCACGCCATACACCCCTCCCACGCCATACACTCCTCCCACGCCATACACCCCTCCCACGCCATACACCCTCCCATGCCATACACCCCTCCCACGCCTCCCACGCCATACACCCCTCCCACGCCATACACCCCTCCCACGCCATATACCCCTCCCACGCCATACACCCTCCCACGCCATACACCCCTCCCACGCCATACACCCCTCCCACACCATACACCCCTCCCACACCATACACTCCTCCCATGCCTCCCATGCCATACAAGCCCTCCTGTGCCATACACACCCCTCCCACGCCATACACCCCCCTCCCACGCCTCCCACACCATACACCCCTCCCACACCATACACCCCTCCCACGCCTCCCACACCATACAAGCCCTCCCGTGCCATACACCCCTCCCACAGCATATAACCCCTCCCACGCCATAAAACCCCTCTCACACCATACACCCCCCTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9696:HG2_PB_SVrefine2Falcon1plusDovetail_7608:HG4_PB_SVrefine2PBcRDovetail_9845:HG2_PB_SVrefine2PBcRplusDovetail_7052:HG2_PB_SVrefine2PB10Xhap12_14307;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9696:HG2_PB_SVrefine2PB10Xhap12_14307;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00896861;ClusterMaxSizeDiff=0.00896861;ClusterMaxEditDist=0.0107623;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=559;DistBack=-668;DistForward=39;DistMin=-668;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=431;REFWIDENED=22:37622941-37623371;PctSeqSimilarity=0.956;PctSizeSimilarity=0.9213;PctRecOverlap=0.4186;SizeDiff=44;StartDistance=-303;EndDistance=-303;GTMatch=0;TruScore=76;MatchId=3468.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:./.:0:0:0:0:./.:0:0:0:0:./.:0:0:1/1:1:50:.:.:.
chr22	37887583	HG2_PB_SVrefine2Falcon2Bionano_9697	C	CAGAGAAGGGGAGGGAGAGACGGGGGAGGGAGGGGGAGGGAGAGAGAGGGGGAGAAGGAGGGGGGAGGGAGGGAGGAGGGAGGGGGAGGGGGAAGGGAAAGAGGGGAGGGGAGGAGACAGGGAAAGGAAGGGGTGGAGGGGAGAGAGACTGGGGGGGAGGGGGGGAGGGAGAGAGGTGGGAGGAAGAGATGGGGGAGGGAGAGAGAGGGGTTGAGAAGGAGGGGGTAGGGAGAGAGGGGGGCAGAGAAAGAGGAGGGGGGAGGGAGGAGGGAGAGAGGGGGAGGGAGAGAGAGGGGTAAGGGAGAAGGAGGGGGGAGGGAGAGAGAGGGGGAGGGAGTGGGGAGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7609:HG3_PB_SVrefine2PBcRDovetail_9635:HG2_PB_PB10Xdip_19517:HG4_PB_pbsv_19498:HG3_PB_pbsv_19239:HG3_PB_SVrefine2Falcon1Dovetail_12172:HG2_PB_pbsv_19568:HG4_PB_SVrefine2Falcon1Dovetail_12179:HG4_PB_SVrefine2PBcRDovetail_9846:HG2_PB_SVrefine2PB10Xhap12_14308:HG2_PB_SVrefine2Falcon2Bionano_9697:HG2_PB_SVrefine2PBcRplusDovetail_7053;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9697;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0926194;ClusterMaxSizeDiff=0.0781476;ClusterMaxEditDist=0.216374;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=345;DistBack=50597;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=90;REFWIDENED=22:37887584-37887673;PctSeqSimilarity=0.984;PctSizeSimilarity=0.9971;PctRecOverlap=0.8213;SizeDiff=-1;StartDistance=-61;EndDistance=-61;GTMatch=0;TruScore=93;MatchId=3469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:1:10:1:9:./.:2:9:1:9:./.:1:2:1/1:1:11:.:.:.
chr22	37925124	HG2_Ill_MetaSV_3101	G	GTTGCAGTGAGCCGAGATCGCGCCACTGCACTTGGGGCTGGGTGACACAGCAAGACCCTGTCTCATAAAATAATAATAATAGGCCAGGCTCGGTGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGCCAAGGTGGGCAGAACACCTGGGGTCAGGAGTTCCAGACCAGCCTGTCCAACATAGTGAAACCCCGTCTCCACCAAAAATACAAAAATTAGTCAGGCATGGTGGTACATGCCTGTAATTCCAGCTACTTAGGAGGCTGAAGCAGGAGAGTCCCTGGAACCCGGGAGGCAAAGGTTCCAGTGAGCCGAGATCGCACCATTGCTCTCCAGCCTGGACAACGAGAGTGAAACTCTGTCTCAAAAAATAATAATAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12181:HG4_Ill_MetaSV_3216:HG4_PB_pbsv_19500:HG4_PB_HySA_28072:HG2_PB_pbsv_19570:HG2_PB_PB10Xdip_19518:HG4_Ill_manta_4356:HG4_Ill_GATKHCSBGrefine_13108:HG3_Ill_GATKHCSBGrefine_12499:HG2_Ill_MetaSV_3101:HG2_Ill_GATKHCSBGrefine_12664:HG3_Ill_MetaSV_3257:HG3_PB_SVrefine2Falcon1Dovetail_12174:HG2_PB_SVrefine2Falcon2Bionano_9699:HG2_PB_SVrefine2Falcon1plusDovetail_7611:HG4_PB_SVrefine2PBcRDovetail_9848:HG3_PB_SVrefine2PBcRDovetail_9636:HG2_PB_SVrefine2PBcRplusDovetail_7055:HG2_PB_SVrefine2PB10Xhap12_14310:HG3_PB_pbsv_19241;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12664:HG2_Ill_MetaSV_3101:HG3_Ill_GATKHCSBGrefine_12499:HG4_Ill_GATKHCSBGrefine_13108:HG4_Ill_manta_4356;NumExactMatchSVs=5;ClusterMaxShiftDist=0.086039;ClusterMaxSizeDiff=0.0552846;ClusterMaxEditDist=0.280507;PBcalls=13;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=598;DistBack=-29;DistForward=30304;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=252;REFWIDENED=22:37924902-37925153;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:1:16:0:15:1/1:0:13:0:10:1/1:0:27:1/1:4:98:.:.:.
chr22	39616437	HG2_PB_SVrefine2Falcon2Bionano_9710	C	TGGATGGATGGATGGATGGATGGACAGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGACAGGTAGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGACAGGTGGATGGATGGATGGATGGATGGAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12191:HG2_PB_SVrefine2PB10Xhap12_14326:HG3_PB_pbsv_19257:HG2_PB_SVrefine2Falcon2Bionano_9710:HG2_PB_SVrefine2Falcon1plusDovetail_7619:HG2_PB_assemblyticsPBcR_16282:HG2_PB_SVrefine2PBcRplusDovetail_7066:HG3_PB_SVrefine2Falcon1Dovetail_12181:HG3_PB_SVrefine2PBcRDovetail_9643:HG2_PB_HySA_35312:HG2_PB_PB10Xdip_19539;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7619:HG2_PB_SVrefine2Falcon2Bionano_9710:HG2_PB_SVrefine2PB10Xhap12_14326;NumExactMatchSVs=3;ClusterMaxShiftDist=0.166065;ClusterMaxSizeDiff=0.166065;ClusterMaxEditDist=0.271062;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=148;DistBack=-1;DistForward=43;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=483;REFWIDENED=22:39616334-39616816;PctSeqSimilarity=0.9782;PctSizeSimilarity=0.9797;PctRecOverlap=0.5906;SizeDiff=3;StartDistance=59;EndDistance=59;GTMatch=0;TruScore=84;MatchId=3472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:1:21:4:31:./.:52:80:24:74:./.:1:11:./.:.:.:.:.:.
chr22	39962070	HG2_PB_SVrefine2Falcon2Bionano_9711	G	GTAGTGATGATGATGCTGGTGGTGATGGTGGAGGTGGTGATAATGATAATGGTGGTGATGATGGTGGTGGTGATGGTGGTGGTGGTGATGGTGATGGCGATGGTGATGGTGA	20	PASS	ClusterIDs=HG3_PB_pbsv_19259:HG3_Ill_manta_4176:HG3_PB_HySA_29135:HG4_Ill_GATKHC_30485:HG4_PB_assemblyticsfalcon_16458:HG2_PB_assemblyticsPBcR_16284:HG4_PB_SVrefine2PBcRDovetail_9853:HG4_PB_SVrefine2Falcon1Dovetail_12192:HG4_Ill_SVrefine2DISCOVARDovetail_13477:HG3_PB_SVrefine2PBcRDovetail_9644:HG3_PB_SVrefine2Falcon1Dovetail_12182:HG2_PB_SVrefine2PBcRplusDovetail_7067:HG2_PB_SVrefine2PB10Xhap12_14327:HG2_PB_SVrefine2Falcon2Bionano_9711:HG4_Ill_GATKHCSBGrefine_13112:HG3_Ill_GATKHC_30484:HG3_Ill_GATKHCSBGrefine_12508:HG2_Ill_GATKHC_30560:HG2_Ill_GATKHCSBGrefine_12670:HG2_PB_PB10Xdip_19540:HG4_Ill_scalpel_17527:HG4_PB_pbsv_19515:HG3_Ill_MetaSV_3259:HG4_Ill_manta_4358:HG2_Ill_manta_5150:HG2_Ill_MetaSV_3104:HG2_PB_HySA_35315:HG2_PB_pbsv_19584;NumClusterSVs=28;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9711:HG2_PB_SVrefine2PB10Xhap12_14327:HG2_PB_SVrefine2PBcRplusDovetail_7067:HG3_PB_SVrefine2Falcon1Dovetail_12182:HG3_PB_SVrefine2PBcRDovetail_9644:HG4_Ill_SVrefine2DISCOVARDovetail_13477:HG4_PB_SVrefine2Falcon1Dovetail_12192:HG4_PB_SVrefine2PBcRDovetail_9853;NumExactMatchSVs=8;ClusterMaxShiftDist=0.203252;ClusterMaxSizeDiff=0.202429;ClusterMaxEditDist=0.31405;PBcalls=15;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=111;DistBack=-1;DistForward=30119;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=22:39962069-39962072;PctSeqSimilarity=0.9533;PctSizeSimilarity=0.9024;PctRecOverlap=0.4309;SizeDiff=-12;StartDistance=64;EndDistance=64;GTMatch=0;TruScore=76;MatchId=3473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:54:1/1:4:18:3:17:./.:98:136:111:127:0/1:2:6:./.:.:.:.:.:.
chr22	40049149	HG3_Ill_SVrefine2DISCOVARDovetail_13690	A	AGTGGCTAAGAGGGCTGACTGCATTGTGGGTGCACGGATTCCCCCACACAGTGGCTAAGAGGGCTGACTGCATTGTGGGTGCACGGAGCCCCCCACACG	20	PASS	ClusterIDs=HG3_PB_pbsv_19261:HG2_PB_HySA_35316:HG3_PB_SVrefine2PBcRDovetail_9646:HG3_Ill_SVrefine2DISCOVARDovetail_13690:HG2_PB_SVrefine2Falcon1plusDovetail_7621:HG2_Ill_SVrefine2DISCOVARplusDovetail_8129:HG2_PB_SVrefine2PBcRplusDovetail_7069:HG2_PB_SVrefine2PB10Xhap12_14329:HG2_PB_assemblyticsPBcR_16287:HG3_PB_HySA_29136:HG2_PB_pbsv_19586:HG2_PB_PB10Xdip_19543:HG3_Ill_250bpfermikitraw_24654:HG2_Ill_250bpfermikitraw_25381;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8129:HG2_PB_SVrefine2Falcon1plusDovetail_7621:HG3_Ill_SVrefine2DISCOVARDovetail_13690:HG3_PB_SVrefine2PBcRDovetail_9646;NumExactMatchSVs=4;ClusterMaxShiftDist=0.123077;ClusterMaxSizeDiff=0.122449;ClusterMaxEditDist=0.280193;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=98;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=147;REFWIDENED=22:40049028-40049174;PctSeqSimilarity=0.9864;PctSizeSimilarity=0.9898;PctRecOverlap=0.4949;SizeDiff=1;StartDistance=49;EndDistance=49;GTMatch=0;TruScore=82;MatchId=3474.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:37:./.:7:7:4:24:./.:1:5:6:0:0/1:33:7:./.:.:.:.:.:.
chr22	40403324	HG3_PB_pbsv_19264	C	CCTTTCACTCTCCTCGCTCCTACTCCCTCTCCTCCTCCTCTCCCTCCTCACCCTGTTGCCTCCTCCTCTCTTCCTCCTCTCCTCCTCTTCTGCTCCTTCCTCCTCCTCCTCCTTCCTTTTTTTTTTTTTTTTTGATACGGAGTCTCCGCTCTGGTCCACCAGGCCAGATGCGGACTGCATGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCGGGTTCACGCCCCATTCTTCCTGCCTCGCCTCCGAGTAGCTGGGACTACAGGCGCCTGCCACCCGCCGGCCTAATTTTTGTGCATATTTTAGAGAGACCGGGGTTTCACCTTTGTTGAGCCAGGATGGTCTCATCTCTGACCTCATGATCCACCCCCTTGCCTTCCCAAAGTGCTGGGATTACAGGCCGCTAAGGCCACCGCGCCGGCCCTCCTCCTTCTTTCCTCCTCCTCTCATTCCTCCTCTCCTCCTCCTCCTCTCCTCTTCCTCCTCTTCCTTCTCCTCCTCTCCCTCCTCTCCCTTGCTTCTTCCTCTCCTCCTCTTCTCCTCCTCTCCTCTCCTGTCCTTCCTCTCCTCTCCTCTTCCTCCTCCT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7622:HG3_PB_assemblyticsfalcon_16728:HG2_PB_HySA_35319:HG2_Ill_breakscan11_5000:HG2_PB_SVrefine2PB10Xhap12_14330:HG4_PB_HySA_28093:HG3_PB_HySA_29139:HG2_PB_PB10Xdip_19546:HG3_PB_pbsv_19264:HG4_PB_pbsv_19520:HG4_PB_SVrefine2Falcon1Dovetail_12194:HG2_PB_pbsv_19589:HG3_PB_SVrefine2Falcon1Dovetail_12184:HG2_PB_SVrefine2PBcRplusDovetail_7070:HG2_PB_SVrefine2Falcon2Bionano_9714:HG3_PB_SVrefine2PBcRDovetail_9647;NumClusterSVs=16;ExactMatchIDs=HG3_PB_pbsv_19264;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0955691;ClusterMaxSizeDiff=0.0763889;ClusterMaxEditDist=0.241963;PBcalls=15;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=584;DistBack=-89;DistForward=6;DistMin=-89;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=153;REFWIDENED=22:40403220-40403372;PctSeqSimilarity=0.9507;PctSizeSimilarity=0.988;PctRecOverlap=0.9812;SizeDiff=7;StartDistance=-7;EndDistance=-7;GTMatch=1;TruScore=97;MatchId=3475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:82:1/1:0:38:0:25:./.:10:34:12:16:./.:3:3:0/1:8:45:.:.:.
chr22	40897206	HG3_PB_SVrefine2Falcon1Dovetail_12186	GAC	CCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGA	10	PASS	ClusterIDs=HG2_PB_pbsv_19593:HG3_PB_SVrefine2PBcRDovetail_9650:HG3_PB_assemblyticsfalcon_16731:HG3_PB_SVrefine2Falcon1Dovetail_12186:HG2_PB_SVrefine2Falcon1plusDovetail_7624:HG2_PB_assemblyticsPBcR_16295:HG3_PB_SVrefine2Falcon1Dovetail_12185:HG3_PB_pbsv_19269:HG2_PB_SVrefine2PB10Xhap12_14333:HG2_PB_SVrefine2PBcRplusDovetail_7072:HG2_PB_PB10Xdip_19550;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_12186:HG3_PB_assemblyticsfalcon_16731;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0532319;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.250951;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=126;DistBack=-3;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=289;REFWIDENED=22:40896917-40897205;PctSeqSimilarity=0.9842;PctSizeSimilarity=0.9618;PctRecOverlap=0.542;SizeDiff=-5;StartDistance=58;EndDistance=60;GTMatch=1;TruScore=82;MatchId=3477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:53:1/1:3:19:1:20:./.:0:0:0:0:./.:0:5:./.:.:.:.:.:.
chr22	41446177	HG2_PB_SVrefine2Falcon1plusDovetail_7630	A	AGCCTCCCGAGTAGCTGGGACTACAGGCACCTGCCACCACGCCCGGCTAATTTTTGTATTTTTTTTTCAGTACAGACAGGGTTTCACCACCTTGGCCAGGGTTGTCTTGAACTCCTGACCTCGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCTGGCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTGTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGAGAACTCCGCTCACTGCAACCTCTGCCTTTCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCCGGGATTACAGGCACCCCCCACCATGCCCGACTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGCACCACGCACGCAGCTTGGAGCCAGAACTTTTAACAACTAAAGTGCGTGCTTTGTGCCAGACAGTTTGCTAAGGCTACAGTATTCAACCCCAAAAGGCCTCGATCTCCTGATCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTACTGGGATTACAGGCATGAGCCACCACGCCCGGCCGGCCATTCACTTTTTGCCAGTGGGCCAGGACAGCCTGGGGTGGGCACTGCTTTCTACCTGTACCCTCCTGTCCACTCACTTGCTTTTGACACACTTGAGTCCTCTGCCTTCCTCAAAAACGCCCTTCTCTTGGCCTCAGCTAGTCCACATTTTCGTGGGTTTCTCTTATCCTGTTGGCTGCTTCTACTCAGCCTTCTTTCCTGAATTCCACCTCCTTTCTCGCCCTCCAACGTGGAAAGTCCTCAGGACTTGATCCTGCCTGCACCCACCTACCTCCCTATGCCTCTCCAGTGAGACCTCACTCAGCCTCACCTGTGGCCAAGTCATTCCCAATTTATTTCTCCTCCTTCATCCTCAGTCTGAGGGTGACATACCCAGCTGTCTGCTCCGCTGGACATTCTTTTAGACAACTTTATTGAGATGTAATTCACATACAATTTATCCCCTTAGAGTGCACCATTCCGTGGTTCTTAGTATATACACAAAGCTGTGCAACCATCACCACAGTCAATTTTAGAGCATTTTCTTTCTTTCTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCACGTTGGCGTGCAATGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCCGCCCCTGTCTCCCAAGTAGCTGGGATTACAGGCACCTGCCTTTGTGCCCGGATAATTTTTGTATTTTTGTAGAGATGGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCTGGACCTCAGGTGATCTGCCCCCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCAGCTGGGTTTTTTTTGTTGTTGTTTTTTTTTTTTTAGATGGAATCTCCTGCCTCAGCCCCCCGAGTAGCTGGTACTACAGGCACTACACCCGGCTAATTTTTGTATTTTTAGTAGAGGCAGGGTTTTGCCATGTTGGCCAGGCTAGTCTCAAACTCCTGACCTGCCCGCCTTGGCTTCCCAAAGTGCTGAGATTACAGGCATGAGCCACCATGCCCAGCCTAGCACATTTTCTTTCTTTCTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGTCATCATGGCTCGCTGCAGCCTCGACCTCCTGGGCTCAAGCAATCCTCCCACCTCGGCCTCCTAAGTAGCTGGGACCACAGGCACATGCCACCACACCCAGCTAATTTTTAAAATTTTTTTGTAAAGACGAGGTCTCACTAAGTTACCCAGGGTGGTCTCAAACTCCTGGCCTCAAGCTATTCTCCCACCTCAGCCTCCCAAAGTGTTGTTCTAGCCATGCCTGGCCAGAACATTTTCATTACCCCAGAAACAAACCCCGAATCCATTAACGGTCACTGTCTATTTCCCTCTGACTTCCACAGGCCTTAGCAAGTACTAATCTGCTTTCTGTCTATATGAATTTGCCTATCCTGGACATTTCGTAGAAATGGGATCATACAGCATGGACCTTTTATGACTAGCTTCTTTCACTTAGCATGGTATTTTCAAGGTTTGTCCATATTGTAGCATGTATCAGAACTTCACTCTTTTTATTTATTTATTTATTTTTCAAATTAATTTTTTTTTTTGGGATGGAGTTTTGCTCTTGTTGCCCAAGCTGGAGTGTAATGAATGGCACGATCTCAGCTGACCACAACCTCTGCCTCCTGGGTTCAAGCGGTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCACACCCGGCTAATTTTGTATTTTTTAAAACACTTTTCTTTTTTTTTTGAGACGGAGTCTCGCTGTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCTGCCACCACGCCTGGCTAATTTTGAATTTTTAGTAGAGATGGGGTTTCACTGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACCCACGTCG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12190:HG4_PB_pbsv_19530:HG3_PB_SVrefine2PBcRDovetail_9652:HG3_PB_pbsv_19276:HG2_PB_HySA_35324:HG2_PB_pbsv_19600:HG2_PB_PB10Xdip_19557:HG3_PB_HySA_29146:HG2_PB_assemblyticsPBcR_16299:HG4_PB_SVrefine2Falcon1Dovetail_12199:HG4_PB_SVrefine2PBcRDovetail_9855:HG2_PB_SVrefine2PBcRplusDovetail_7075:HG2_PB_SVrefine2Falcon1plusDovetail_7630:HG4_Ill_SVrefine2DISCOVARDovetail_13482:HG2_PB_SVrefine2PB10Xhap12_14336;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7630;NumExactMatchSVs=1;ClusterMaxShiftDist=0.18882;ClusterMaxSizeDiff=0.18882;ClusterMaxEditDist=0.276094;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=2692;DistBack=43855;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=185;REFWIDENED=22:41446178-41446362;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9974;PctRecOverlap=0.9478;SizeDiff=-7;StartDistance=-138;EndDistance=-138;GTMatch=0;TruScore=97;MatchId=3478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:66:0|1:31:6:2:22:./.:0:0:10:0:0/1:25:3:0/1:83:221:.:2445:.
chr22	41690915	HG3_PB_pbsv_19277	C	CCCCGCGTCCAGGAGGTGAGGGGGCCTCTCGCCCCGGCCCGCCCCTACTGGGAGTGAGGAGCGCCCTCTGCCCGGCCAGCCGCCACCGTCACTCGGGGGGAGGTGGGGGGGGGTCAGCCACGCCGCGCCGGACAGGACCGCCCCGTCCGGGCGGGAGTGGGGGTCAGCCCCCCGCGCTGGCCGCCACCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCTACTGGGAAAGTGAGGAGCCCCTCTGCCAGCCAGCCGCCCTGTCCGGAGGAGGTGGGGGGAGCCCAGCCGCCCCGTCCGGAGAGGGAGGTGGGGGGTCAGTCCTGCCCGGCCAGCCGCCCTATCGGGAGGAGTGGGGGGTGAGCCCGCCCGGCCAGCCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9719:HG3_PB_SVrefine2Falcon1Dovetail_12192:HG2_PB_SVrefine2PBcRplusDovetail_7077:HG3_PB_SVrefine2PBcRDovetail_9653:HG2_PB_PB10Xdip_19558:HG3_PB_pbsv_19277:HG2_PB_pbsv_19601:HG4_PB_SVrefine2Falcon1Dovetail_12200:HG4_PB_pbsv_19531:HG3_PB_SVrefine2Falcon1Dovetail_12191:HG2_PB_SVrefine2Falcon1plusDovetail_7631:HG4_PB_SVrefine2PBcRDovetail_9856:HG2_PB_SVrefine2PB10Xhap12_14337:HG2_PB_SVrefine2PBcRplusDovetail_7076;NumClusterSVs=14;ExactMatchIDs=HG3_PB_pbsv_19277;NumExactMatchSVs=1;ClusterMaxShiftDist=0.206044;ClusterMaxSizeDiff=0.192044;ClusterMaxEditDist=0.304527;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=384;DistBack=11387;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=41;REFWIDENED=22:41690878-41690918;PctSeqSimilarity=0.9431;PctSizeSimilarity=0.9974;PctRecOverlap=0.8831;SizeDiff=-1;StartDistance=45;EndDistance=45;GTMatch=0;TruScore=94;MatchId=3479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:54:1/1:2:25:4:28:./.:2:0:0:0:0/1:5:4:0/1:9:6:.:4981:.
chr22	41696510	HG3_PB_SVrefine2PBcRDovetail_9654	T	TTGTTGCCCAGGCTAGAGTACAATGGTGCAATCTTGGCTCACTGCAACCTCCACCTCATGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGATGCCCGCCACCACACCCAGCTAATTTTTGTATTTTAGTAGAGATGGGGTTTCACCACGTTGGCCACGATGGTCTCAAACTCCTGACCTCAGGTGATTTGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCATGCCCAGCCTGACATTTATATTTATTCAGCCTTCACTACATGGTTTACAGGCATTATTCATTATAATCCACCCCCCCGCCGCCTTTTTTTTTTTTTTTAGACGGAGTCTTTCTTTGTCGCCTAGGCTGAAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCCTCTTCCAGGGTTCAAGGGATTCTCCTGCCTCAGCTTCCTGAGTAGCTGAGACTACAGGCGCACATCACCATGCCTGGATAATTTTTGTATTTTTAGTAGAGACAGGGTTTCATCATGTTGGCCAGGCTGGTCTCGAACTCCTGACTCAAGCAAGCCTCGCGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGTATGAGCCATCACGCCCATATTTCATGAAAATCCTTAAATCAAACTTTATGTGGATTCAGTTTCCTTATCTTTATCTTACAAATGAAGAAATTGATGCTGCTAGATTGCCAGGGTCACATAGCCAGCGATTGGCAGGGCTGGGGACCTTGGTCTTCCTAATGTCTTCGTGACATAAGAACCACACCATCCAGCCTCCCTAAATCGCCAGGCGCAGCCTCTCACTGCCTCTAGCCCATGATCTTGTGTCTATCCCATGATCTTGCGTCTATCGCAGGTGTCTTAAGGGTTGATTTCCCATTAAACAGCAGAGATGTCTGATGGCCACTGAACTCTGTTTTCAGATCTGGACAAAAGCATTTACCTTCTTCATGCCAGAGACTTTCTTTTTTTTTTTTCTTTTTTTTTTTTTGGCAGGGTCTTGCTCTGTCACCTAGGCTAGAGTGCAGTGGCCCAATCACGGCTCACTGCAGCCTCAGTCTCCTGGGCTCAAGCGAGCCTCCCACCTCAGCCTCCTAAGTAGCTGGAACCACACACACGTCACCACACCTCATTAATTTTTTGATTTTTTTGTAGAGATAGGACCTCACAGGCCGGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGATGCCAAGATGGGTGGATCATTTGAGGCCAGGAGTTCGAGACCAGCCTGGCTGACATTGCAAAACTCCATCTCCATTTTAAAAAAATACAAAAAGATTAGCTGGGCAGGGTGGCACATTCCTGTAACCCCAGCTACTCAGGAGGCTGTGGCATGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGATCCAGGATTGTGCCACTGTACTCCAGCCTGGGTGACAAAGTGAGACCTTGCTCAAAAAAAAAAAAAAAAAAAAGATGGAATCTCACTGTGTCGCCACGGCTGGTCTAGAATTCCTGAGCTCAAGGAATCCTCCTACCTCAGCCTCCTGAAGTGCTGGGATTACAGCTGTCAGGCACCACGCACAGCTGAAGTTGTCTTTTTGTTTGTTGATCTCAGAGTAGTGAGGAGGGAGAAAGCACCCAGAGAAGGAAGAGTCTGAGAGCTTCTGCAGGTTCAGATGCATTTTGTTGCCCTTTAAAGTCTCCCTTAAAGCAGAGACAGAGGAAAGCGTGGGAGGCCATGTAAAGCACACAGACTCTGGAGACAGAACTGCTACCTTGGGCAAGTCACTTCATTCTGAGCTTCAGTTTCTCATCTGTAAAATGGGCATGATGAAACCAATCTTCCAGGATTACTGTGAGAATTAAATAGGTAAATGCAGACTGTGTGCAGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCCGAGGCAGGAGGATCACTTGAGTCCAGGAGTTGGAGACCAGCCTGGACAGCACGAGACCCCATCTCTACAAAAAATTTTTAAAATTAGCCAGGTGTAGGGATGTGTACGTGTGGTCTCAGCTACTTGGGAGGCTGAGGCAGGAGGATCATTTGAGCCCAGGAGCTGGAGGCTGCAGTGAGCCATGATCACGCTACTATCCTCCAGCCTACTCAAGAGAGTCAGATCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAGGTAATCACAGCTCCAGGTTCTTGTCTCTCCTAGAACTTACCACGATGCATTTAAATATTTAAAATTTGGTTCACTGTTACATCCCTGGTTCCTAAGATTGTGTCTGGCACAAATGTTTGTGGAAGAGATAACATTTGTAAAGATAAAGTCTGCCAGGCTCACAGCTGATCTGAAATAAATTAAAAATATATACACATGTGTGTATGTGTGCATGTGTGTAAAATGAAGAGGATTAAGACGGAAATCTGAGAGAACTCTTGAGAGAGTCCTCCAGGAATTAATGGGGCAGGTAGTGCTAAATGAACACTCTTTGGATCATGAGCTATGGATTCAAATGTAGCCTCTTCACCAGTCCTGAGGCAGTATCATGGATATGCATAGCTGGTCTGTCTGGTTAATCTCCTCTTACCTAGTAGGTCTTCTAAGCAGCCTCAGATCCTTTCTAGAATGATCCCTGGCAAAGATTCTCTCCTCGACTAAACTCTATTTAGGCTCCCCTGAACTTTTCAACTAGGCCTTGACTTTTGGACTTCTGTGTTCATCTTTACATTGTCCAGTTTTGTTTTGTTTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCGGCCTCCCGAGTATCTGGGAGTACAGGTGCCCAGCACCACGCCTGGGTAATTTTTTGTATTTTTAGCAGAGACGGTGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCAGCCTCCCAAAGTACTGGGATTACAGGTGTGAGCCACCGTGCCCGGCCGGTTTTGTTTGGTTTTTAGGGACAGGGCCTTGCTCTGTTACCCAGGCTGGAGTGCAGGTGGCATGATCATCACTCACTGTAGCCTCAAACTCCTAGCCTCAAGTGATCCTCCTGCCTCAGCCTTCAGAATAGCTGGGACTACAGGCACATGCCACCACGCCAGCTAATTCTTTAATTTTTTTAGAGACAGGGTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCCGGGCTCAAGTGAACCTCCTGCCTAAACCTCCCAAAGTGCTGGCATTACAGGTGTGAGCCACTGCCCCCTGGGCTGCGTTGTCCAATTTTGGCAAGAATCCTGCTAAGTTGGTTTAGCGAGACTCCCCATTCTCCATACCTGATTGTCAATATCTTTTTTTTTTTTCTTTTTTGAGACGGAGTCTCACCC	10	PASS	ClusterIDs=HG2_PB_HySA_35326:HG2_PB_PB10Xdip_19559:HG4_PB_pbsv_19532:HG3_PB_HySA_29150:HG2_PB_SVrefine2PBcRplusDovetail_7078:HG3_PB_SVrefine2Falcon1Dovetail_12193:HG2_PB_SVrefine2PB10Xhap12_14338:HG3_PB_SVrefine2PBcRDovetail_9654:HG4_PB_SVrefine2Falcon1Dovetail_12201:HG2_PB_SVrefine2Falcon1plusDovetail_7632;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_9654;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0214439;ClusterMaxSizeDiff=0.0214439;ClusterMaxEditDist=0.238075;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=3502;DistBack=25;DistForward=3850;DistMin=25;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=253;REFWIDENED=22:41696511-41696763;PctSeqSimilarity=0.9989;PctSizeSimilarity=0.9997;PctRecOverlap=0.9986;SizeDiff=1;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=3480.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:38:0|1:13:0:1:21:./.:17:0:0:4:0/1:17:20:0/1:137:191:.:4981:.
chr22	41710928	HG2_Ill_GATKHCSBGrefine_12674	T	TAAAAATACAGGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCTTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAACTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG3_PB_HySA_29151:HG3_PB_pbsv_19278:HG4_PB_pbsv_19533:HG2_PB_pbsv_19602:HG4_PB_assemblyticsfalcon_16473:HG4_PB_HySA_28100:HG3_PB_SVrefine2Falcon1Dovetail_12194:HG2_Ill_MetaSV_3106:HG2_Ill_GATKHCSBGrefine_12674:HG4_PB_SVrefine2Falcon1Dovetail_12202:HG2_PB_SVrefine2Falcon1plusDovetail_7633:HG2_PB_HySA_35327:HG2_PB_SVrefine2PB10Xhap12_14339;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12674:HG2_Ill_MetaSV_3106;NumExactMatchSVs=2;ClusterMaxShiftDist=0.302521;ClusterMaxSizeDiff=0.29916;ClusterMaxEditDist=0.322689;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=314;DistBack=4;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=22:41710929-41710941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:0|1:18:3:1:19:0|1:21:0:0:5:0/1:29:17:0/1:4:28:.:.:.
chr22	43214823	HG2_PB_HySA_35344	T	TTTCTTTCTGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAAGTAGCTGGGACGACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	20	PASS	ClusterIDs=HG2_Ill_breakscan11_5001:HG3_PB_pbsv_19286:HG2_PB_pbsv_19611:HG2_PB_HySA_35344:HG2_PB_SVrefine2Falcon2Bionano_9727:HG3_PB_SVrefine2PBcRDovetail_9660:HG2_PB_SVrefine2Falcon1plusDovetail_7641:HG3_PB_HySA_29162;NumClusterSVs=8;ExactMatchIDs=HG2_PB_HySA_35344;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0655226;ClusterMaxSizeDiff=0.0655226;ClusterMaxEditDist=0.18845;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=313;DistBack=-1;DistForward=43666;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=13;REFWIDENED=22:43214824-43214836;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9937;PctRecOverlap=0.9937;SizeDiff=-2;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:30:0:0:28:1|0:0:6:18:0:0/1:27:5:0/1:7:40:.:.:.
chr22	43346416	HG2_PB_SVrefine2PB10Xhap12_14347	A	AGGGAGGGAAGGAGAGAGGGAGAGAGGGGACCTGGAGGGGAGGGGAGGGGAGGGGAGTGG	20	PASS	ClusterIDs=HG2_PB_HySA_35347:HG3_PB_HySA_29164:HG3_PB_pbsv_19288:HG4_PB_SVrefine2PBcRDovetail_9862:HG2_PB_pbsv_19613:HG4_PB_pbsv_19543:HG2_Ill_breakscan11_5002:HG4_PB_HySA_28111:HG4_Ill_scalpel_17541:HG4_Ill_SVrefine2DISCOVARDovetail_13488:HG4_Ill_Krunchall_26013:HG4_Ill_GATKHC_30508:HG4_Ill_GATKHCSBGrefine_13117:HG4_Ill_250bpfermikitraw_25008:HG3_PB_SVrefine2PBcRDovetail_9662:HG3_Ill_scalpel_18322:HG3_Ill_SVrefine2DISCOVARDovetail_13706:HG3_Ill_Krunchall_25225:HG3_Ill_GATKHC_30513:HG3_Ill_GATKHCSBGrefine_12516:HG3_Ill_250bpfermikitraw_24678:HG3_Ill_150bpfermikitraw_23927:HG2_PB_SVrefine2PBcRplusDovetail_7087:HG2_PB_SVrefine2PB10Xhap12_14347:HG2_PB_SVrefine2Falcon2Bionano_9729:HG2_PB_SVrefine2Falcon1plusDovetail_7642:HG2_Ill_scalpel_17955:HG2_Ill_manta_5154:HG2_Ill_SpiralSDKrefine_10565:HG2_Ill_SVrefine2DISCOVARplusDovetail_8148:HG2_Ill_Krunchall_25703:HG2_Ill_GATKHC_30590:HG2_Ill_GATKHCSBGrefine_12679:HG2_Ill_250bpfermikitraw_25405:HG2_10X_SVrefine210Xhap12_13618:HG4_PB_SVrefine2Falcon1Dovetail_12210:HG3_PB_SVrefine2Falcon1Dovetail_12201:HG2_PB_PB10Xdip_19571;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13618:HG2_Ill_250bpfermikitraw_25405:HG2_Ill_GATKHCSBGrefine_12679:HG2_Ill_GATKHC_30590:HG2_Ill_Krunchall_25703:HG2_Ill_SVrefine2DISCOVARplusDovetail_8148:HG2_Ill_SpiralSDKrefine_10565:HG2_Ill_manta_5154:HG2_Ill_scalpel_17955:HG2_PB_SVrefine2Falcon1plusDovetail_7642:HG2_PB_SVrefine2Falcon2Bionano_9729:HG2_PB_SVrefine2PB10Xhap12_14347:HG2_PB_SVrefine2PBcRplusDovetail_7087:HG3_Ill_150bpfermikitraw_23927:HG3_Ill_250bpfermikitraw_24678:HG3_Ill_GATKHCSBGrefine_12516:HG3_Ill_GATKHC_30513:HG3_Ill_Krunchall_25225:HG3_Ill_SVrefine2DISCOVARDovetail_13706:HG3_Ill_scalpel_18322:HG3_PB_SVrefine2PBcRDovetail_9662:HG4_Ill_250bpfermikitraw_25008:HG4_Ill_GATKHCSBGrefine_13117:HG4_Ill_GATKHC_30508:HG4_Ill_Krunchall_26013:HG4_Ill_SVrefine2DISCOVARDovetail_13488:HG4_Ill_scalpel_17541:HG4_PB_HySA_28111:HG4_PB_SVrefine2PBcRDovetail_9862;NumExactMatchSVs=29;ClusterMaxShiftDist=0.101695;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.222222;PBcalls=15;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=59;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=18;REFWIDENED=22:43346417-43346434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:78:1/1:3:33:1:35:1/1:1:18:1:22:1/1:0:36:./.:.:.:.:.:.
chr22	43474814	HG2_PB_SVrefine2PB10Xhap12_14350	G	GCACAGGAGCCGCACCCCAGAGCGTGAGCCCATCCCACACCCCTCACACCCACAGACACGGGGACCACGGGAGCCGCACCCCAGAGCGTGAGCCCATCCCACACCCCTCACACCCACAGACACGGGGACCACGGGAGCCGCACCCCAGAGCGTGAGCCCATCCCACACCCCTCACACCCACAGACATGGGGAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9663:HG2_PB_pbsv_19614:HG2_PB_PB10Xdip_19576:HG2_PB_HySA_35350:HG3_PB_pbsv_19289:HG3_PB_HySA_29167:HG4_PB_SVrefine2PBcRDovetail_9863:HG2_PB_SVrefine2PB10Xhap12_14350:HG4_PB_SVrefine2Falcon1Dovetail_12211:HG2_PB_SVrefine2PBcRplusDovetail_7089:HG2_PB_SVrefine2Falcon1plusDovetail_7643:HG3_PB_SVrefine2Falcon1Dovetail_12202:HG2_PB_SVrefine2Falcon2Bionano_9730;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14350:HG4_PB_SVrefine2PBcRDovetail_9863;NumExactMatchSVs=2;ClusterMaxShiftDist=0.056701;ClusterMaxSizeDiff=0.0309278;ClusterMaxEditDist=0.251282;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=192;DistBack=38370;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=450;REFWIDENED=22:43474815-43475264;PctSeqSimilarity=0.9937;PctSizeSimilarity=1;PctRecOverlap=0.3679;SizeDiff=0;StartDistance=-122;EndDistance=-122;GTMatch=0;TruScore=78;MatchId=3485.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:48:1/1:3:20:1:16:./.:0:0:1:0:./.:1:0:./.:.:.:.:.:.
chr22	43828231	HG2_PB_SVrefine2PB10Xhap12_14355	C	CAGAGAGAAAGAAAGGGAAGAGAGGGAGGGAAAGAGAGAGAAAGGGAGGAGAGAGAGAGAAAGGGAGGAGAGAGAGGGAAAGAGAGAGAGAGAAAGGGAGGAGAGAAAGAGGGAAAGAGAAGGGGAGGAGAGAGAGAAAGGGAGAGAGAAAGGGAGGAGAGAGAGAGAAACGGAGGAGAGAGAGATAAAGGGAGGAGAGAGAAAGGGAGGAGAGAAAGGGAGGAGAGAGATAAAGAGAGGAGAGAGAGAGAAAGGGAGGAGAGAAAGGGAGGAGAGAGAGGGAAAGAGAAAGGGAGGAGAGAGATAAAGGGAGGAGAGAAAGAAAGGGAGGAGAGAGAGAGAAAGGGAGGAGAGAGAGAGAAAGGGAGGAGAGAGAGGGAAAGAGGGAGGAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12216:HG2_PB_SVrefine2Falcon1plusDovetail_7647:HG2_PB_SVrefine2PB10Xhap12_14355:HG2_PB_SVrefine2PBcRplusDovetail_7093;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14355;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0981132;ClusterMaxSizeDiff=0.0981132;ClusterMaxEditDist=0.115723;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=391;DistBack=-639;DistForward=0;DistMin=-639;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=672;REFWIDENED=22:43828232-43828903;PctSeqSimilarity=0.9059;PctSizeSimilarity=0.7058;PctRecOverlap=0.0108;SizeDiff=-163;StartDistance=-467;EndDistance=-467;GTMatch=1;TruScore=54;MatchId=3487.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:94:1/1:0:37:0:14:./.:15:87:3:134:0/1:8:13:./.:1:17:.:.:.
chr22	44126099	HG2_PB_SVrefine2PB10Xhap12_14360	A	AAAGGAGGGCAGGAGGGAAGGATGGAAGGAGGGAAGGAGGAAAGGATGGAGGGAGGGAGGGAGGGAAGGAGGGGAGGGAGGGAAGGGATGGAGGGAGGGAAGGAGGGAAGGGATGGAGGGAGGGAAGGAGGGAAGGGAGGGAGGGAGGGGAGGAGGGAAAGGAGGGAAGGGAGGGAGGGAGGGAAGGGATGGAGGGAGGGGAGGAGGGAAGGGAGGGGAGGAGGGAAGGAGGGGAGGGAGGGAGGGAGGGGAGGAGGGAAGGAGGGGAAGGAGGGAAGGGAGGGAGGGGAGGGAGGGAAGGGAGGGAAGGGAGGGAGGGAAGGGAGGGAAGGGAAGGAGGGAGGGGAGGAGGGAAGGGAGGGAAGGAGGGAAGGAAGAGGAAGGAGGGAAGGAGGGAAGGGAGGGAGGGAAGGAGGGAAAGGAGGAAAGGAGGAAAGGAGGGAAGGAGGGAAGGAGGGAAGGGAGGGAGGGAGGGAGGGAAGGAGGGAAGGGAGGGAAGGAGGGAAGGGAGGGAAGGAGGGAAGGGAGGGAAGGAGGG	20	PASS	ClusterIDs=HG3_PB_pbsv_19303:HG2_PB_pbsv_19628:HG2_Ill_breakscan11_5005:HG4_PB_HySA_28120:HG2_PB_HySA_35370:HG4_PB_pbsv_19559:HG3_PB_SVrefine2PBcRDovetail_9670:HG3_PB_SVrefine2Falcon1Dovetail_12211:HG2_PB_SVrefine2Falcon1plusDovetail_7649:HG2_PB_SVrefine2Falcon2Bionano_9737:HG2_PB_SVrefine2PBcRplusDovetail_7097:HG2_PB_SVrefine2PB10Xhap12_14360:HG4_PB_SVrefine2PBcRDovetail_9869:HG4_PB_SVrefine2Falcon1Dovetail_12221;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14360:HG2_PB_SVrefine2PBcRplusDovetail_7097;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0961183;ClusterMaxSizeDiff=0.0961183;ClusterMaxEditDist=0.199269;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=537;DistBack=3942;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=78;REFWIDENED=22:44126100-44126177;PctSeqSimilarity=0.9871;PctSizeSimilarity=0.9817;PctRecOverlap=0.9177;SizeDiff=-10;StartDistance=-40;EndDistance=-40;GTMatch=1;TruScore=96;MatchId=3488.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:1/1:1:30:0:17:./.:0:14:0:4:0/1:1:7:0/1:5:22:.:.:.
chr22	44609476	HG2_PB_assemblyticsPBcR_16355	T	TCCACTGTCACCATCATCACCATCACATCATCAACACCACCACAATTATCACCATCATCACCA	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23885:HG4_PB_pbsv_19566:HG3_PB_pbsv_19314:HG3_PB_HySA_29193:HG2_PB_HySA_35387:HG2_PB_pbsv_19636:HG3_Ill_scalpel_18344:HG3_Ill_Spiral_19561:HG3_Ill_250bpfermikitraw_24699:HG3_Ill_150bpfermikitraw_23949:HG2_PB_assemblyticsPBcR_16355:HG2_Ill_scalpel_17978:HG2_Ill_250bpfermikitraw_25428;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23885:HG3_Ill_scalpel_18344:HG3_Ill_Spiral_19561:HG3_Ill_250bpfermikitraw_24699:HG3_Ill_150bpfermikitraw_23949:HG2_PB_assemblyticsPBcR_16355:HG2_Ill_scalpel_17978:HG2_Ill_250bpfermikitraw_25428;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0916031;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.270677;PBcalls=6;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=62;DistBack=0;DistForward=26;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=32;REFWIDENED=22:44609475-44609509;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:./.:1:4:1:3:./.:30:74:14:46:./.:1:3:./.:.:.:.:.:.
chr22	45002748	HG4_Ill_GATKHC_30540	C	CCTCCAAGCCCACCACCAGGTGTGCCCGCCAGGGCTCTACCCTCCTACCGCCTCCAAGCCCACCACCAGGTGTGCCTGCCAGGGCTCTACCCTCCTACCGT	20	PASS	ClusterIDs=HG4_PB_HySA_28131:HG4_PB_SVrefine2PBcRDovetail_9874:HG2_PB_pbsv_19639:HG2_PB_SVrefine2Falcon1plusDovetail_7660:HG4_PB_pbsv_19569:HG4_Ill_Krunchall_26037:HG2_PB_PB10Xdip_19612:HG4_Ill_GATKHC_30540:HG4_Ill_GATKHCSBGrefine_13128:HG4_Ill_250bpfermikitraw_25030:HG2_Ill_GATKHC_30633:HG2_Ill_GATKHCSBGrefine_12694:HG2_Ill_250bpfermikitraw_25433:HG2_PB_HySA_35395;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25433:HG2_Ill_GATKHCSBGrefine_12694:HG2_Ill_GATKHC_30633:HG4_Ill_250bpfermikitraw_25030:HG4_Ill_GATKHCSBGrefine_13128:HG4_Ill_GATKHC_30540:HG4_Ill_Krunchall_26037;NumExactMatchSVs=7;ClusterMaxShiftDist=0.256684;ClusterMaxSizeDiff=0.243386;ClusterMaxEditDist=0.374332;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=100;DistBack=21984;DistForward=60;DistMin=60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=149;REFWIDENED=22:45002697-45002845;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3490.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:24:./.:12:17:11:5:./.:3:0:3:7:0/1:18:9:./.:.:.:.:.:.
chr22	45321906	HG2_Ill_GATKHC_30644	C	CCTGTGGTGGGAAGGCCCACACAGCACGGCCCTGTGGTGGATTCCCAGGGAAGTGGGTT	20	PASS	ClusterIDs=HG3_PB_HySA_29202:HG3_PB_pbsv_19322:HG3_Ill_svaba_24101:HG2_PB_pbsv_19645:HG2_Ill_svaba_23857:HG2_Ill_breakscan11_5008:HG3_Ill_svaba_24100:HG3_Ill_scalpel_18356:HG3_Ill_manta_4183:HG3_Ill_Spiral_19572:HG3_Ill_Krunchall_25258:HG3_Ill_GATKHC_30571:HG3_Ill_GATKHCSBGrefine_12534:HG3_Ill_250bpfermikitraw_24713:HG3_Ill_150bpfermikitraw_23963:HG2_Ill_svaba_23856:HG2_Ill_manta_5160:HG2_Ill_SpiralSDKrefine_10591:HG2_Ill_Krunchall_25737:HG2_Ill_GATKHC_30644:HG2_Ill_GATKHCSBGrefine_12701:HG2_Ill_250bpfermikitraw_25442:HG2_Ill_150bpfermikitraw_23897;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23897:HG2_Ill_250bpfermikitraw_25442:HG2_Ill_GATKHCSBGrefine_12701:HG2_Ill_GATKHC_30644:HG2_Ill_Krunchall_25737:HG2_Ill_SpiralSDKrefine_10591:HG2_Ill_manta_5160:HG2_Ill_svaba_23856:HG3_Ill_150bpfermikitraw_23963:HG3_Ill_250bpfermikitraw_24713:HG3_Ill_GATKHCSBGrefine_12534:HG3_Ill_GATKHC_30571:HG3_Ill_Krunchall_25258:HG3_Ill_Spiral_19572:HG3_Ill_manta_4183:HG3_Ill_scalpel_18356:HG3_Ill_svaba_24100;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0847458;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.305085;PBcalls=3;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=12;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=41516;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=133;REFWIDENED=22:45321907-45322039;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3493.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:36:./.:15:28:1:2:1|0:0:9:8:0:0/1:27:29:./.:.:.:.:.:.
chr22	45340770	HG4_Ill_150bpfermikitraw_24056	G	GGCAAGAGCTGGGCCTCGACTGTCACTCCTGCCTTCCTGCCGCAGTCCTGAGCCTTCGTTTCC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23899:HG2_PB_pbsv_19646:HG4_Ill_manta_4367:HG4_PB_assemblyticsfalcon_16540:HG4_Ill_GATKHC_30553:HG4_Ill_GATKHCSBGrefine_13133:HG2_Ill_GATKHC_30646:HG2_Ill_GATKHCSBGrefine_12702:HG4_PB_HySA_28136:HG2_PB_assemblyticsPBcR_16364:HG4_PB_pbsv_19574:HG2_PB_HySA_35407:HG4_Ill_svaba_23746:HG4_Ill_Krunchall_26043:HG4_Ill_250bpfermikitraw_25036:HG4_Ill_150bpfermikitraw_24056:HG2_Ill_svaba_23859:HG2_Ill_Krunchall_25739:HG2_Ill_250bpfermikitraw_25444;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23899:HG4_Ill_svaba_23746:HG4_Ill_Krunchall_26043:HG4_Ill_250bpfermikitraw_25036:HG4_Ill_150bpfermikitraw_24056:HG2_Ill_svaba_23859:HG2_Ill_Krunchall_25739:HG2_Ill_250bpfermikitraw_25444;NumExactMatchSVs=8;ClusterMaxShiftDist=0.112903;ClusterMaxSizeDiff=0.112;ClusterMaxEditDist=0.244275;PBcalls=6;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=62;DistBack=28;DistForward=13894;DistMin=28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=62;REFWIDENED=22:45340771-45340832;PctSeqSimilarity=0.9879;PctSizeSimilarity=0.9839;PctRecOverlap=0.6667;SizeDiff=1;StartDistance=-20;EndDistance=-20;GTMatch=0;TruScore=87;MatchId=3494.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:./.:5:17:17:9:0|1:15:0:0:24:0/1:21:22:./.:.:.:.:.:.
chr22	45379893	HG4_PB_SVrefine2Falcon1Dovetail_12231	G	GCCACCGCCATCATCATTGGCATCATCACCACCATCATCACTATCATCATCATCACCATCACCACCACCATCACCATCATCATCACCATCATCACCACCATAACCACCATCACCATCATCATGATCACCATCATCATCACCACCATCACCACCATCATCACCATCACCACCACCATCACACCACCACCACCATCATCATCACATCATCACAACCACCACCATCGTCACCACCATAACCAACACCATCACAACCACCACCATCACCATAACCATCACCACCATCATCACCATCACCACCACCATCATCACCATCACCACCACCATCACCATCACCACCATCACCACCATCATCACCACCACCACCACCACACCATCACCATCACCATCACCACCACCATCACTACCATAACCACCATCACCATCATCACCATCATTACCACCATCATCATCACCATCACCACCACCATCATCACCACCATCATCACCATAACCACCACCACCATCACCATAACCATCACCACCATCATCACCATCACCACTACCGTCACCATCACCACCACCATCACTACCATCACCATCACCACCACCATTATCACCATCACCACACACCATCATCACCACCATCATCACCATCACCACCACCATCACGATTATCACCATCACCGCCATCATTACCACCATCATCACCATCACCACCACCACCGCCACCATCATCATCACCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7663:HG4_PB_pbsv_19575:HG2_PB_PB10Xdip_19614:HG2_PB_HySA_35408:HG4_PB_HySA_28137:HG4_Ill_MetaSV_3230:HG4_Ill_GATKHCSBGrefine_13134:HG2_PB_pbsv_19647:HG3_PB_pbsv_19323:HG3_PB_SVrefine2Falcon1Dovetail_12218:HG4_PB_SVrefine2PBcRDovetail_9876:HG3_PB_SVrefine2PBcRDovetail_9680:HG2_PB_SVrefine2Falcon2Bionano_9748:HG4_PB_SVrefine2Falcon1Dovetail_12231:HG2_PB_SVrefine2PB10Xhap12_14372:HG2_PB_SVrefine2PBcRplusDovetail_7107;NumClusterSVs=16;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_12231;NumExactMatchSVs=1;ClusterMaxShiftDist=0.056872;ClusterMaxSizeDiff=0.0555179;ClusterMaxEditDist=0.192739;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=721;DistBack=10308;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=294;REFWIDENED=22:45379894-45380187;PctSeqSimilarity=0.9675;PctSizeSimilarity=0.973;PctRecOverlap=0.7895;SizeDiff=-20;StartDistance=-146;EndDistance=-146;GTMatch=0;TruScore=91;MatchId=3495.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:0:19:1:14:./.:2:21:2:22:./.:3:2:1/1:1:175:.:.:.
chr22	45433951	HG2_PB_HySA_35411	C	CGTTCCATTGGCAGGTGACAGTGTTCCATTTGGTGGAGACATGTGCAGCAGTGCA	20	PASS	ClusterIDs=HG2_PB_HySA_35411:HG4_PB_HySA_28140:HG2_PB_pbsv_19648:HG4_Ill_250bpfermikitraw_25042:HG4_PB_pbsv_19576;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_35411;NumExactMatchSVs=1;ClusterMaxShiftDist=0.227642;ClusterMaxSizeDiff=0.211382;ClusterMaxEditDist=0.325203;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=-215;DistForward=61;DistMin=-215;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=29;REFWIDENED=22:45433950-45433981;PctSeqSimilarity=0.9244;PctSizeSimilarity=0.8852;PctRecOverlap=0.9016;SizeDiff=-7;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=90;MatchId=3496.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:27:0|1:37:2:1:21:./.:5:0:11:1:./.:7:1:./.:.:.:.:.:.
chr22	45636666	HG3_Ill_SVrefine2DISCOVARDovetail_13728	C	CCGGAGCCCCGCCGGCGCGGACGCCGAGGCGCAGGCCCGGCCCGGCGGCCGCGCGGAGGCCATGCCGGGCCGCGGCTCATCGCCTGCGCCGCGCCCGCAGGGGCCCCCGGCGCGCCCCGCCGCCCCCGCCCCGA	20	PASS	ClusterIDs=HG4_PB_pbsv_19581:HG2_PB_HySA_35418:HG3_PB_HySA_29215:HG3_PB_pbsv_19329:HG4_PB_assemblyticsfalcon_16547:HG2_PB_pbsv_19653:HG2_PB_PB10Xdip_19621:HG2_PB_assemblyticsPBcR_16371:HG2_Ill_breakscan11_5010:HG2_PB_SVrefine2Falcon2Bionano_9751:HG2_PB_SVrefine2Falcon1plusDovetail_7666:HG4_PB_SVrefine2PBcRDovetail_9878:HG4_Ill_SVrefine2DISCOVARDovetail_13507:HG4_Ill_Cortex_2251:HG3_PB_SVrefine2PBcRDovetail_9684:HG3_PB_SVrefine2Falcon1Dovetail_12224:HG3_Ill_SVrefine2DISCOVARDovetail_13728:HG3_Ill_Cortex_2282:HG2_PB_SVrefine2PBcRplusDovetail_7111:HG2_PB_SVrefine2PB10Xhap12_14377:HG2_Ill_SVrefine2DISCOVARplusDovetail_8168:HG2_Ill_Cortex_5319:HG2_Ill_250bpfermikitraw_25453:HG4_PB_SVrefine2Falcon1Dovetail_12234:HG4_PB_HySA_28143:HG2_PB_HySA_35417;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25453:HG2_Ill_Cortex_5319:HG2_Ill_SVrefine2DISCOVARplusDovetail_8168:HG2_PB_SVrefine2PB10Xhap12_14377:HG2_PB_SVrefine2PBcRplusDovetail_7111:HG3_Ill_Cortex_2282:HG3_Ill_SVrefine2DISCOVARDovetail_13728:HG3_PB_SVrefine2Falcon1Dovetail_12224:HG3_PB_SVrefine2PBcRDovetail_9684:HG4_Ill_Cortex_2251:HG4_Ill_SVrefine2DISCOVARDovetail_13507:HG4_PB_SVrefine2PBcRDovetail_9878;NumExactMatchSVs=12;ClusterMaxShiftDist=0.195313;ClusterMaxSizeDiff=0.194553;ClusterMaxEditDist=0.320313;PBcalls=18;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=133;DistBack=11412;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=12;REFWIDENED=22:45636667-45636678;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3497.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:35:1/1:0:16:2:15:./.:0:0:0:2:1/1:0:13:./.:.:.:.:.:.
chr22	46762080	HG2_PB_SVrefine2Falcon2Bionano_9758	A	AAGGTGCAGGGGAAGGGAAGGTGCGAGGCGGGGAGGGAAGGTGCGGGGCAGGGAGGGAAGTTGCGGGTGGGAAGAAAGGTGGGGGGAGGAGAGGTGCACGGGGGGAGGAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9758:HG4_PB_assemblyticsfalcon_16566:HG2_Ill_breakscan11_5011:HG2_PB_PB10Xdip_19626:HG3_PB_HySA_29233:HG4_PB_HySA_28157:HG4_PB_SVrefine2Falcon1Dovetail_12243:HG3_PB_SVrefine2PBcRDovetail_9691:HG3_PB_SVrefine2Falcon1Dovetail_12230:HG2_PB_SVrefine2Falcon1plusDovetail_7674:HG2_PB_HySA_35440:HG2_PB_pbsv_19663:HG4_PB_pbsv_19592:HG3_PB_pbsv_19341:HG4_PB_SVrefine2PBcRDovetail_9886:HG3_PB_SVrefine2PBcRDovetail_9690:HG2_PB_SVrefine2PBcRplusDovetail_7118:HG2_PB_SVrefine2PB10Xhap12_14385;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9758:HG2_PB_SVrefine2PBcRplusDovetail_7118:HG2_PB_SVrefine2PB10Xhap12_14385;NumExactMatchSVs=3;ClusterMaxShiftDist=0.104265;ClusterMaxSizeDiff=0.104265;ClusterMaxEditDist=0.229358;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=109;DistBack=6658;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=83;REFWIDENED=22:46762081-46762163;PctSeqSimilarity=0.9556;PctSizeSimilarity=0.9633;PctRecOverlap=0.3211;SizeDiff=4;StartDistance=-72;EndDistance=-72;GTMatch=0;TruScore=74;MatchId=3498.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:32:1/1:1:10:1:14:./.:1:2:1:9:./.:0:0:./.:.:.:.:.:.
chr22	46810392	HG3_Ill_GATKHC_30589	G	GCCCGCCTCTCGGCGAGTGTGGGTTTAACGCGCAGGCTAACCGTCCACTCT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_25467:HG3_PB_pbsv_19342:HG2_PB_pbsv_19664:HG3_PB_HySA_29234:HG3_Ill_SVrefine2DISCOVARDovetail_13733:HG3_Ill_GATKHC_30589:HG3_Ill_250bpfermikitraw_24733:HG2_PB_SVrefine2Falcon1plusDovetail_7675:HG2_Ill_SVrefine2DISCOVARplusDovetail_8179:HG2_Ill_Krunchall_25758:HG2_Ill_GATKHCSBGrefine_12714;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25467:HG3_Ill_SVrefine2DISCOVARDovetail_13733:HG3_Ill_GATKHC_30589:HG3_Ill_250bpfermikitraw_24733:HG2_PB_SVrefine2Falcon1plusDovetail_7675:HG2_Ill_SVrefine2DISCOVARplusDovetail_8179:HG2_Ill_Krunchall_25758:HG2_Ill_GATKHCSBGrefine_12714;NumExactMatchSVs=8;ClusterMaxShiftDist=0.11215;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.192308;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=50;DistBack=40844;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=150;REFWIDENED=22:46810393-46810542;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3499.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:42:0|1:23:4:1:31:./.:2:2:9:1:0/1:21:13:./.:.:.:.:.:.
chr22	46865862	HG4_PB_SVrefine2Falcon1Dovetail_12244	A	AAGGGAGGGAGGGAGGAGGAGGGGAGGGAGGGAGGATGAGGGGAGGGAGGGAGGAGGAGGGGAGGGAGGGAGGAGGAGGGGAGGGAGGGAGGATGAGGGGAGGGAGGGAGGAGGACGGGAGGGAGGGAGGAGGAGGAGGGGAGGGAGGGAGGAGGGGAGGGAGGGAGGGAGGAAGAGGGGAAGGAGGGAGGAGGAGGGGAGGGAGGGAGGAGGAGGGGAGGGAGGGAGGAGGAGGGGAGGGAGGAGAGGGAGGGAGGAGGATGAGGGAGGAGGGAGGAGGAGGGAGGGAGGAGAGGGGAGGGAGGGAGGATGAGGGGAGGGAGGGAGGAGGAGGGGAGGGAGGGAAGGAGGAGGGGAGGAGGGAGGGAGGAAGAGGGGAAGGAGGGAGGAGGAGGGGAGGGAGGAGGAGGGAGGGGAGGAGGGAGGAGAGGAGGGAGGAGAGGGGAGGGAGGGAGGAGGAGGGAGGGAGGAGAGGGGAGGGAGGGAGGATGAGGGGAGGGAGGGAGGAGGGGAGGGAGGAGGGGAGGAGGAGGGGAGGGAGGGAGGGAGGATGAGGGAAGGGAGGAAGGAGGATGAGGGGAGGGAGGAAGGAGGATGAGGGGAGGGAGGAGGAGGAGGGGAGGGAGGAGGGAGGAGGAGGGGAGGGAGGGATGGAGGAGGAGGAGGGGAAGGAGGGAGGAGGAGGGGAGGGAGGGAGGGAGGAGGAGGAGAGGAGGGAGGATGAGGGAGGGGAGAGGAGGGGAGGGAGGAGGAGGAGGAGGGGAGGAGGATGAGGGAGGGAGGGAGGAGGATGAGGGAGAGGGAGGAGGAGGATGAGGGAGGGAGGGAGGAGGAGGGGAGGGAGGGGGGAGAAGGAGGGAGGGAGGATGAGGGGGGGAGGGAGGGAGATGAGGAGGGAGGGAGGAGGAGGGGAGGGAGGAGGGAGAAGGAGGGAGGGAGGATGAGGGGAGGGAGGGAGGGAGGATGAGGGAGGGAGGGAAGGAGGATGAGGGGAGGGAGGAGGGAGGAGGGGAGGGAGGGAGGGAGGAGGAGGGGAGGGAGGATGGAGGAGGAGGAGGGGATGGAGGAGGAGGAGGGGAGGGAGGAGGGAGGAGGAGGAGGGAGAGAGGGGAGGGAGGAGGGAGGGGGATGGGAGGGAGGGAGGGGGATGGGAGGGAGGGAGGGAGGGAGGAGGGAGGGAGGAGGGAGGAGGAGAGGAGGAAGGGAGGAGGAGGAGGGAGGAGGGAGGAGAGGGGAGGGAGGGAGGGAGGATGAGGGGAGGGAGGGAGGATGAGGGGAAGAGGGAGGAGGAGGGAGGGAGGGAGGAGGAGGGGAGGGAGGGAGGAGGAGGGAGGAGGAGGGAGGGGAGGAGGGAGGGAGAGAGGAGGAGGAGGGGAGGGAGGGAAGGAGGATGAGGGAGGGGGGGGGGAGGGGAAGGAGGAGGGGAAGGAGGAGGAGGAGGGGAGGGAGGGAGGATGAGGGGAGGAGGGAGGGAGGAGGAGGGAGGGAGGAGGAGGAGGGAGGGAGGAGGAGGAGGGGAGGGAGCGAGGAGGAGGGGAGGAGGGGGAGGAGAGGGGAAGGAGGAGGAGGAGGGGAGGGAGGGAGGAGGAGGGGAGGGAGGAGGATGAGGGGAGGGAGGGAGGAGGAGGAGAAGGAGGGAGGAGGAGGGAGGGAGGGAGGAGGAGGGGAGGGAGGGAGGACGAGGGAGGAGGAGGATGAGAGGGAGGAGGAGGAGGAGGGAAGGAGGGAGGAGGAGGGGAAGGAGGGAGGAGGAGGGAGAGAGGGAGGGAGGAGGAGGGGAGAGAGGAGGAGGAGGAGGGAGGGAGGGAGGAGGAGGGGAGGAGGGGAGGAGG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12244:HG2_PB_HySA_35442:HG4_PB_pbsv_19593:HG4_PB_HySA_28158:HG3_PB_pbsv_19343:HG3_PB_HySA_29235:HG3_PB_SVrefine2Falcon1Dovetail_12231:HG4_PB_assemblyticsfalcon_16567:HG2_PB_SVrefine2Falcon1plusDovetail_7676:HG2_PB_SVrefine2Falcon2Bionano_9759;NumClusterSVs=10;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_12244;NumExactMatchSVs=1;ClusterMaxShiftDist=0.217209;ClusterMaxSizeDiff=0.217209;ClusterMaxEditDist=0.255509;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1831;DistBack=20479;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=34;REFWIDENED=22:46865863-46865896;PctSeqSimilarity=0.9682;PctSizeSimilarity=0.9556;PctRecOverlap=0.9551;SizeDiff=-85;StartDistance=-14;EndDistance=-14;GTMatch=1;TruScore=95;MatchId=3500.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:0:14:2:14:./.:0:2:0:3:./.:0:4:0/1:11:59:.:1960:.
chr22	46883554	HG2_PB_SVrefine2Falcon2Bionano_9760	A	AGGGTGCAGGTGGGGGGCGTGGGGGAGGGGAGTCCAGGGTGCAGGTGGGGGGTGCGGGGGAGGGGAGTCCAGGGTGCGGGGGAGGGGAGTCCAGGGTGCAGGTGGGGGGCACGGAGGAGGGGAGTCCAGGGTGCAGGTGGG	10	PASS	ClusterIDs=HG4_PB_pbsv_19595:HG2_PB_PB10Xdip_19627:HG4_PB_assemblyticsfalcon_16568:HG4_PB_SVrefine2Falcon1Dovetail_12245:HG3_PB_SVrefine2Falcon1Dovetail_12232:HG3_PB_HySA_29237:HG3_PB_pbsv_19344:HG4_PB_SVrefine2PBcRDovetail_9887:HG3_PB_SVrefine2PBcRDovetail_9692:HG2_PB_SVrefine2PBcRplusDovetail_7119:HG2_PB_SVrefine2PB10Xhap12_14386:HG2_PB_SVrefine2Falcon2Bionano_9760:HG2_PB_assemblyticsPBcR_16387:HG2_PB_SVrefine2Falcon1plusDovetail_7677;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9760:HG2_PB_SVrefine2PB10Xhap12_14386:HG2_PB_SVrefine2PBcRplusDovetail_7119:HG3_PB_SVrefine2PBcRDovetail_9692:HG4_PB_SVrefine2PBcRDovetail_9887;NumExactMatchSVs=5;ClusterMaxShiftDist=0.188406;ClusterMaxSizeDiff=0.188406;ClusterMaxEditDist=0.31769;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=140;DistBack=61;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=259;REFWIDENED=22:46883429-46883687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3501.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:1/1:1:4:3:35:./.:1:9:0:1:./.:0:0:./.:.:.:.:.:.
chr22	46898279	HG2_Ill_GATKHC_30665	A	AGGGAAGGGTAAAGTGGAAAGAAGAGGGAAGGGGAAAGGGGAGGGAAGGGGT	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_13735:HG4_PB_HySA_28159:HG4_PB_pbsv_19596:HG3_PB_HySA_29239:HG3_Ill_GATKHC_30590:HG2_Ill_GATKHC_30665:HG2_Ill_GATKHCSBGrefine_12715:HG2_PB_HySA_35444:HG3_PB_SVrefine2PBcRDovetail_9694;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12715:HG2_Ill_GATKHC_30665:HG3_Ill_GATKHC_30590;NumExactMatchSVs=3;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.209524;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=10;DistForward=25;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=157;REFWIDENED=22:46898263-46898419;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3502.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:24:./.:25:1:9:20:./.:7:7:14:0:0/1:6:8:./.:.:.:.:.:.
chr22	47038781	HG2_PB_SVrefine2Falcon2Bionano_9769	T	TATCTATCTATCCATCCATCCATCTATTTATCCATCCAGGGATCCATTCATCCATCCATCCATCCATCCACGCATGCATCTATCCATCCATCCATCCATCCATCCATCCATTCATCCATTCATTTATCCATCCCTGGATCCATCCATCCCTGGATCCATCCGTCCATCCACCCACCTACCCATCCATCCATCTATCCATTTATCCATCCATCCATCCATCCATCCATCCATGCATCCATCCATGCATCCTTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATTTATCCATCCCTGGATCCATCCATCCATCCATCCATCCATCCATCCGTCCATCCATCTATCCATCCATCCATTTATCCATCCATCCATCCATCCATCCATCCACCCACCCACCCACCCACCCATCCATCCATCTATCCATTTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCCTGGATCCATCTGTCCATCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7689:HG2_PB_HySA_35466:HG4_PB_pbsv_19606:HG3_PB_pbsv_19358:HG2_PB_pbsv_19681:HG2_PB_SVrefine2Falcon1plusDovetail_7690:HG4_PB_SVrefine2PBcRDovetail_9892:HG2_PB_SVrefine2PB10Xhap12_14398:HG2_PB_SVrefine2PBcRplusDovetail_7128:HG2_PB_SVrefine2Falcon2Bionano_9769:HG3_PB_SVrefine2Falcon1Dovetail_12245:HG3_PB_SVrefine2PBcRDovetail_9699:HG4_PB_SVrefine2Falcon1Dovetail_12255;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9769:HG2_PB_SVrefine2PBcRplusDovetail_7128;NumExactMatchSVs=2;ClusterMaxShiftDist=0.111538;ClusterMaxSizeDiff=0.103846;ClusterMaxEditDist=0.294231;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=496;DistBack=3591;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=484;REFWIDENED=22:47038782-47039265;PctSeqSimilarity=0.9592;PctSizeSimilarity=1;PctRecOverlap=0.4467;SizeDiff=0;StartDistance=-275;EndDistance=-275;GTMatch=1;TruScore=80;MatchId=3503.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:2:24:0:14:1/1:3:78:0:91:1/1:0:13:./.:3:20:.:1260:.
chr22	47076483	HG2_Ill_scalpel_18011	C	CCACCCACCCACCCACCCATTCATCCATCCATCCGTCCTTCCATCCATCCATCCACCCACCCATCCACCCATTCATCCATCCATCCACCTACCCACCCATCCATCCATCCATCAATCCATCCGTCCATCCATCCATCCACCCATCCATCCATCCATCCACCCACCCACCCATT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9770:HG3_PB_SVrefine2PBcRDovetail_9700:HG2_PB_pbsv_19682:HG2_PB_PB10Xdip_19644:HG2_PB_HySA_35468:HG3_Ill_scalpel_18376:HG3_Ill_GATKHC_30605:HG2_Ill_scalpel_18011:HG2_Ill_manta_5167:HG2_Ill_GATKHC_30681:HG2_Ill_GATKHCSBGrefine_12720:HG3_PB_SVrefine2Falcon1Dovetail_12246:HG2_PB_SVrefine2Falcon1plusDovetail_7691:HG3_PB_pbsv_19359:HG4_PB_SVrefine2Falcon1Dovetail_12256:HG4_PB_pbsv_19607:HG2_PB_SVrefine2PB10Xhap12_14399:HG2_PB_SVrefine2PBcRplusDovetail_7129;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12720:HG2_Ill_GATKHC_30681:HG2_Ill_manta_5167:HG2_Ill_scalpel_18011:HG3_Ill_GATKHC_30605:HG3_Ill_scalpel_18376;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0623229;ClusterMaxSizeDiff=0.0623229;ClusterMaxEditDist=0.25641;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=172;DistBack=7;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=404;REFWIDENED=22:47076454-47076857;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3504.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:38:1/1:0:18:0:14:./.:11:47:24:67:./.:0:7:./.:.:.:.:.:.
chr22	47274189	HG4_PB_pbsv_19612	G	GGGAAGGAAAGAGAAGAGAAGGAAGGTGGAGGGGAGAGAGAAGAAGGAGGTGGGAGGGAGAGAGAGAAGGAGGTGAGAGGGAGAGAGAGAAGGAGGTGAGAGGGAGAGAGAGAAGGAGGAATGGGAAGGAGGAGAGAAGGAGTGGGAGGGAGAAGAGAAAGGGTGGGGGGAGGGAAGAGAAGGAGGATGGGAGGGAGGGAGAGAAGGAGGTGGAGGGAGGAGAGGGAACAGTAGGGGGGGAGAGAAGGGGTGAAGGGGAGAGAAGAAGGAGGTGGGAGGGGGAGAGAGAAGGAGGTGGGTAGGGGGAGAGAGAAGGAGAGGTGGGAGGGAGGGAGGAAGGAGGTAGGAGTGAGGAGAGAAGTGGGGGGGAGAGAGAAGGACGAATGGGAGGGGAGACAGAAAGGAGGTGGGGACGGAGAGAGAAGGAGGTGGGAGGGAGGGAAGAAAGGAGGTGGAGGGGGGAGAGAGAAGGAGGTGGGGAGACCGAGGAAGGTGGGAGGGGGAGAGAGAAAGGAGGTGGGGGGAGAGGAGGGGTGAGGGGGCGAGAGGAGAGGTGGGAGGGGGGGAGAGGCAGAGGTGGGAGGGGAGAGAAGGAGGTGGGAGGGCGGGAGAAGGGTGGGGGGAGAGGAGGAGGTGGGGGGAGGGAGACGAAGGAGAGTGGAGGGGAGAGAGGAGGTGGGAGGGGGAGAAGAAGGGAGGTGGGGAGAGAAGGAGGTGGGAAGTGGGGGAGAGAAGGAGGTGGGAAGGGAGGGGGGAGAAGGAGGTGGGAGGGGGGAGAGAGAGAGGGGTTGGAAGGGAGGAGAGAAGGAGGTGGAGGAGGGGGAGAAGAGAGGTGGGAGAGTGGGGCAGAGAAGGAGGTGGGGGAGAGAAGGAGGTGGGAGGGATAGGGGGAGAAGGAGGTGGGAGGGGAGAGAAGGGGAGTGAGGGGGAGGAGAAGGAGGTGGGAGGT	20	PASS	ClusterIDs=HG4_PB_pbsv_19612:HG3_PB_HySA_29257:HG3_PB_pbsv_19361:HG2_Ill_breakscan11_5015:HG2_PB_HySA_35475:HG3_PB_HySA_29256:HG4_PB_HySA_28186:HG2_PB_HySA_35474:HG2_PB_assemblyticsPBcR_16399:HG3_PB_HySA_29255:HG2_PB_SVrefine2Falcon1plusDovetail_7694:HG4_PB_SVrefine2PBcRDovetail_9897:HG2_PB_SVrefine2PB10Xhap12_14402:HG2_PB_SVrefine2Falcon2Bionano_9772:HG2_PB_SVrefine2PBcRplusDovetail_7131:HG4_PB_assemblyticsfalcon_16586:HG3_PB_SVrefine2PBcRDovetail_9702:HG2_PB_pbsv_19686:HG3_PB_SVrefine2Falcon1Dovetail_12249:HG4_PB_SVrefine2Falcon1Dovetail_12260;NumClusterSVs=20;ExactMatchIDs=HG4_PB_pbsv_19612;NumExactMatchSVs=1;ClusterMaxShiftDist=0.177854;ClusterMaxSizeDiff=0.177854;ClusterMaxEditDist=0.274247;PBcalls=19;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=948;DistBack=17689;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=54;REFWIDENED=22:47274190-47274243;PctSeqSimilarity=0.9457;PctSizeSimilarity=0.9863;PctRecOverlap=0.9579;SizeDiff=13;StartDistance=-33;EndDistance=-33;GTMatch=1;TruScore=96;MatchId=3505.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:79:1/1:1:31:1:26:./.:21:34:19:24:0/1:10:9:0/1:29:46:.:.:.
chr22	47487201	HG3_Ill_Spiral_19603	T	TGGTGGGGTGTGGCCTCGCGGAGGGGGTGACTGCTTGTTGATAGAGACGGGCACGAGAAGTCGTCTTTGGTGGGGAGTGGCCTCGCGGAGG	20	PASS	ClusterIDs=HG3_Ill_Spiral_19603:HG2_PB_pbsv_19689;NumClusterSVs=2;ExactMatchIDs=HG3_Ill_Spiral_19603;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0324324;ClusterMaxEditDist=0.194595;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=90;DistBack=-1;DistForward=3;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2;REFWIDENED=22:47487200-47487204;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3507.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:0|1:26:1:3:29:./.:1:18:10:0:./.:1:1:./.:.:.:.:.:.
chr22	47523826	HG2_PB_SVrefine2PBcRplusDovetail_7133	A	ACCCACCCATCCTCTCCTCCACCCCACCCGTCCTTCCCTCCACCCCACCCATCCCCCATCCTCCCTCCACCCCACCCATCCCCCATCCTCCCTCCACCCCACCCATCCTCTCCTCCGCCCAACCCATCCCCCCTCCCCTCACCCATCCCCCATCCTCCCTCCACCCCACCCATCCCCATCCTCCCTCCACCCCCATCCCCCATCCTCCTCCCCCCACCCATCCCCCACCCCCATCCTCCCTCCACCCCACCCATCCCCCATCCTCCCTCCACCCCACCCATCCCCCATCCTCCCTCCACCCCACCCATCCCCCATCCTCCCTCCACCCCACCCATCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCATCCTCCCTCTGCCCCACCCATCCCCCCCCCCACCCATCCCCCTCCCCTCACCCATCCCTCCCTCCGCCCCACCCATCCCTCCCTCCGCCCTACCCATCCTCCTCCGCCCCACCCACCCCCCTCCGCCCCACCCATCCCCCCTCCCCTCACCCATCCCTCCCTCCGCCCCCCCCCCCCCCCACCCATCCCTCCCTCCGCCCCACCCATCCCTCCTCCGCCCCACCCACCACCCCTCCGCCCCACCCATCCCCCCTCCCCTCACCCATCCCTCCATCCTCCCTCCACCCCACCCATTCTCCCCTCCACCCCACCCATCCCCCATCCTCCCTCCACCCCACCCATCCTCCCCTCCAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7695:HG2_PB_pbsv_19690:HG2_PB_SVrefine2Falcon2Bionano_9773:HG4_PB_pbsv_19613:HG4_PB_SVrefine2PBcRDovetail_9898:HG3_PB_SVrefine2Falcon1Dovetail_12252:HG2_PB_SVrefine2PB10Xhap12_14405:HG3_PB_pbsv_19368:HG2_PB_SVrefine2PBcRplusDovetail_7133:HG4_PB_SVrefine2Falcon1Dovetail_12262;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_7133;NumExactMatchSVs=1;ClusterMaxShiftDist=0.253904;ClusterMaxSizeDiff=0.253904;ClusterMaxEditDist=0.363883;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=721;DistBack=10437;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=143;REFWIDENED=22:47523827-47523969;PctSeqSimilarity=0.9276;PctSizeSimilarity=0.8932;PctRecOverlap=0.8516;SizeDiff=77;StartDistance=-69;EndDistance=-69;GTMatch=1;TruScore=89;MatchId=3508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:0:16:1:20:./.:2:10:1:8:./.:1:4:0/1:3:20:.:.:.
chr22	47566242	HG2_PB_SVrefine2Falcon1plusDovetail_7697	A	AGACGGTCCCGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCTTCCTGATGCAGGACCAGAGAGAGGACAGTCCTGGTGTGTAACCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACGCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACGCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAGGACAGTCCTGGTGTGTAACCCTCCTGATGCAGGACCGGAGAGAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12253:HG2_PB_pbsv_19693:HG2_PB_SVrefine2Falcon1plusDovetail_7697:HG2_PB_SVrefine2Falcon2Bionano_9775:HG2_PB_SVrefine2PB10Xhap12_14407;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7697;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0146939;ClusterMaxSizeDiff=0.0081367;ClusterMaxEditDist=0.133878;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=615;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=336;REFWIDENED=22:47566243-47566578;PctSeqSimilarity=0.9919;PctSizeSimilarity=1;PctRecOverlap=0.4992;SizeDiff=0;StartDistance=-308;EndDistance=-308;GTMatch=0;TruScore=83;MatchId=3509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:50:0|1:30:0:2:32:./.:5:0:2:3:./.:20:3:0/1:7:9:.:.:.
chr22	47740747	HG4_Ill_GATKHC_30611	C	CAGGAGAGAGAGGCAGATTCTGGAGGGAAGTTGGGGTATGGGGCCCAGCAGGGTCTGCGGGG	20	PASS	ClusterIDs=HG4_PB_HySA_28205:HG4_PB_assemblyticsfalcon_16597:HG3_PB_HySA_29273:HG4_PB_pbsv_19623:HG2_PB_pbsv_19699:HG4_Ill_svaba_23789:HG3_PB_pbsv_19372:HG4_Ill_manta_4378:HG4_Ill_Krunchall_26082:HG4_Ill_GATKHC_30611:HG4_Ill_GATKHCSBGrefine_13157:HG4_Ill_250bpfermikitraw_25078:HG4_Ill_150bpfermikitraw_24098:HG3_Ill_svaba_24150:HG3_Ill_manta_4192:HG3_Ill_GATKHC_30633:HG3_Ill_GATKHCSBGrefine_12551:HG3_Ill_250bpfermikitraw_24756:HG3_Ill_150bpfermikitraw_24008:HG2_Ill_svaba_23902:HG2_Ill_manta_5173:HG2_Ill_SpiralSDKrefine_10634:HG2_Ill_Krunchall_25784:HG2_Ill_GATKHC_30702:HG2_Ill_GATKHCSBGrefine_12730:HG2_Ill_250bpfermikitraw_25492:HG2_PB_HySA_35486:HG2_PB_PB10Xdip_19672;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25492:HG2_Ill_GATKHCSBGrefine_12730:HG2_Ill_GATKHC_30702:HG2_Ill_Krunchall_25784:HG2_Ill_SpiralSDKrefine_10634:HG2_Ill_manta_5173:HG2_Ill_svaba_23902:HG3_Ill_150bpfermikitraw_24008:HG3_Ill_250bpfermikitraw_24756:HG3_Ill_GATKHCSBGrefine_12551:HG3_Ill_GATKHC_30633:HG3_Ill_manta_4192:HG3_Ill_svaba_24150:HG4_Ill_150bpfermikitraw_24098:HG4_Ill_250bpfermikitraw_25078:HG4_Ill_GATKHCSBGrefine_13157:HG4_Ill_GATKHC_30611:HG4_Ill_Krunchall_26082:HG4_Ill_manta_4378:HG4_Ill_svaba_23789;NumExactMatchSVs=20;ClusterMaxShiftDist=0.226087;ClusterMaxSizeDiff=0.226087;ClusterMaxEditDist=0.336283;PBcalls=8;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=61;DistBack=1794;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=6;REFWIDENED=22:47740746-47740754;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3510.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:36:0|1:25:4:2:30:1|0:0:21:10:0:0/1:26:23:./.:.:.:.:.:.
chr22	48050328	HG2_Ill_manta_5174	G	GATGATGATGGTGGTGGAGATGGTGATGATGATGATGGTGTTAGTGATAATAATGATGGTGATGGTGATAGTGGTAATGATGATGATGGTGATGATGGTGTTGATGAAGGTGATGGTGATAGTGGAATGATGATGGCAATGATGGTAATGATGATGGTGATGATGGTGATAATGTTGATGGTGATGATGATGATGGTGATGGTGGTGGTGATGATGTTGGGGTTAATGGTGATCATGGCTGGTGGTAATGATGATGATAGCA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3280:HG4_PB_HySA_28210:HG2_PB_HySA_35490:HG3_Ill_manta_4193:HG4_Ill_MetaSV_3241:HG2_Ill_MetaSV_3125:HG3_PB_pbsv_19379:HG4_PB_pbsv_19629:HG3_Ill_SVrefine2DISCOVARDovetail_13751:HG4_PB_SVrefine2PBcRDovetail_9904:HG4_PB_SVrefine2Falcon1Dovetail_12269:HG4_Ill_SVrefine2DISCOVARDovetail_13530:HG3_PB_SVrefine2PBcRDovetail_9712:HG3_PB_SVrefine2Falcon1Dovetail_12258:HG2_PB_SVrefine2PBcRplusDovetail_7139:HG2_PB_SVrefine2PB10Xhap12_14414:HG2_PB_SVrefine2Falcon2Bionano_9777:HG2_PB_SVrefine2Falcon1plusDovetail_7701:HG2_Ill_manta_5174:HG2_Ill_SVrefine2DISCOVARplusDovetail_8193:HG2_10X_SVrefine210Xhap12_13671;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13671:HG2_Ill_SVrefine2DISCOVARplusDovetail_8193:HG2_Ill_manta_5174:HG2_PB_SVrefine2Falcon1plusDovetail_7701:HG2_PB_SVrefine2Falcon2Bionano_9777:HG2_PB_SVrefine2PB10Xhap12_14414:HG2_PB_SVrefine2PBcRplusDovetail_7139:HG3_PB_SVrefine2Falcon1Dovetail_12258:HG3_PB_SVrefine2PBcRDovetail_9712:HG4_Ill_SVrefine2DISCOVARDovetail_13530:HG4_PB_SVrefine2Falcon1Dovetail_12269:HG4_PB_SVrefine2PBcRDovetail_9904;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0756144;ClusterMaxSizeDiff=0.0718336;ClusterMaxEditDist=0.169742;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=261;DistBack=15111;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=147;REFWIDENED=22:48050329-48050475;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:92:1/1:1:50:1:16:1/1:0:12:1:18:1/1:0:26:./.:.:.:.:.:.
chr22	48075311	HG2_PB_SVrefine2PB10Xhap12_14415	A	AATCCATCTATCCATCCAACCATCCATCCATCCATCCACACATCCATCCATCCATCCATCCATCATCCATCCATCCATCCATCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCCATCCACACACCCATCCATCCACACATCCATCCATCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12259:HG2_PB_pbsv_19704:HG4_PB_pbsv_19630:HG2_PB_SVrefine2Falcon2Bionano_9778:HG2_PB_SVrefine2PBcRplusDovetail_7140:HG4_PB_SVrefine2PBcRDovetail_9905:HG2_PB_SVrefine2PB10Xhap12_14415:HG2_PB_SVrefine2Falcon1plusDovetail_7702:HG4_PB_SVrefine2Falcon1Dovetail_12270;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7702:HG2_PB_SVrefine2PB10Xhap12_14415:HG4_PB_SVrefine2PBcRDovetail_9905;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0981595;ClusterMaxSizeDiff=0.0981595;ClusterMaxEditDist=0.193939;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=158;DistBack=12053;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=368;REFWIDENED=22:48075312-48075679;PctSeqSimilarity=0.9683;PctSizeSimilarity=0.9405;PctRecOverlap=0.2604;SizeDiff=-10;StartDistance=-120;EndDistance=-120;GTMatch=0;TruScore=72;MatchId=3513.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:77:1/1:0:29:0:18:1/1:1:97:1:82:./.:2:10:./.:.:.:.:.:.
chr22	48205588	HG2_PB_SVrefine2PB10Xhap12_14417	G	GGTGTGTGTGTGGGGTGTATGTGTGTGGTGTGTACGTATGTGTGTGTGGTGTGTGTGTGGTTTAGGTGGTGTGTTTGGGGGGGAGTGTGTGTGTGTGGTGTGTATGTATGTGTGTGCTGTGGTGTGTGGTTTAGGTGGTGTGTGGGGTGTGTGTGTGTGTGGTGTGTACGTGTGTGTGAGGTGTGTGTGTGTGGTGTGTGGTGTGTGTGTGTGTGTGGTGTCGTGTGTGTGGTTTAGGAGGTGTGTTTGGGGGAGTGTGTGTGTGTGGTGTGTATGTATGTGTATGCATGTGTATGGTATGGTGTGTGGTTTAGGTGGTGTGTGGGGGGTGTGTGTGTGTGTGTGGTGTGTATGTATATGTATGTGTGTGTGGTGTGTGGTTTAGGTGGTGCGTGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7704:HG3_PB_HySA_29286:HG3_PB_pbsv_19382:HG2_PB_HySA_35495:HG2_PB_pbsv_19706:HG4_PB_pbsv_19631:HG2_PB_PB10Xdip_19683:HG2_Ill_breakscan11_5017:HG3_PB_SVrefine2Falcon1Dovetail_12261:HG4_PB_SVrefine2Falcon1Dovetail_12272:HG3_PB_SVrefine2PBcRDovetail_9715:HG2_PB_SVrefine2PBcRplusDovetail_7142:HG2_PB_SVrefine2PB10Xhap12_14417:HG2_PB_SVrefine2Falcon2Bionano_9780:HG4_PB_SVrefine2PBcRDovetail_9906;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14417:HG2_PB_SVrefine2PBcRplusDovetail_7142;NumExactMatchSVs=2;ClusterMaxShiftDist=0.117791;ClusterMaxSizeDiff=0.100613;ClusterMaxEditDist=0.239103;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=395;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=392;REFWIDENED=22:48205589-48205980;PctSeqSimilarity=0.963;PctSizeSimilarity=0.9587;PctRecOverlap=0.5521;SizeDiff=-17;StartDistance=-176;EndDistance=-176;GTMatch=0;TruScore=82;MatchId=3514.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:82:1/1:3:43:0:24:1/1:3:660:8:654:./.:0:5:1/1:1:56:.:.:.
chr22	48513122	HG2_PB_SVrefine2Falcon2Bionano_9781	G	GGAAAGAAAAGAGGTGAGAGGGAAAGAGGGAAAGAGGGAAGGAGGGAAGGAAAAAAGGAAGGAAGGAAGAAAGGAAGGGAGGAAGGAAGAAAGGAAGGAAGGAAGGAAGTGGGGGAGGGAGGGAGAATAATTTGTGAATTCACGAATCAGCAACAATACATTGAGAACTGATCACTCTGCTCAGGTTGACTGTCAGTGTCTACAGAGCAGGATCTCCTCACACTCTCTAGGCTCATTAATTGTTTGTGACAACTAGTGACACTTGTGTTTGTTGCCAGTATAATTTGTGAATTCACGAATAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7705:HG2_PB_HySA_35500:HG3_PB_pbsv_19384:HG2_PB_PB10Xdip_19686:HG2_PB_pbsv_19708:HG4_Ill_MetaSV_3242:HG3_PB_HySA_29291:HG4_Ill_GATKHCSBGrefine_13164:HG3_Ill_MetaSV_3281:HG3_Ill_GATKHCSBGrefine_12559:HG2_Ill_GATKHCSBGrefine_12734:HG2_Ill_MetaSV_3126:HG2_Ill_breakscan11_5018:HG4_PB_SVrefine2PBcRDovetail_9907:HG4_PB_pbsv_19634:HG4_PB_SVrefine2Falcon1Dovetail_12273:HG4_Ill_SVrefine2DISCOVARDovetail_13532:HG3_PB_SVrefine2PBcRDovetail_9716:HG3_Ill_SVrefine2DISCOVARDovetail_13755:HG2_PB_SVrefine2PBcRplusDovetail_7143:HG2_PB_SVrefine2PB10Xhap12_14418:HG2_PB_SVrefine2Falcon2Bionano_9781:HG2_Ill_SVrefine2DISCOVARplusDovetail_8195:HG2_10X_SVrefine210Xhap12_13676:HG3_PB_SVrefine2Falcon1Dovetail_12262;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13676:HG2_Ill_SVrefine2DISCOVARplusDovetail_8195:HG2_PB_SVrefine2Falcon2Bionano_9781:HG2_PB_SVrefine2PB10Xhap12_14418:HG2_PB_SVrefine2PBcRplusDovetail_7143:HG3_Ill_SVrefine2DISCOVARDovetail_13755:HG3_PB_SVrefine2PBcRDovetail_9716:HG4_Ill_SVrefine2DISCOVARDovetail_13532:HG4_PB_SVrefine2Falcon1Dovetail_12273:HG4_PB_SVrefine2PBcRDovetail_9907;NumExactMatchSVs=10;ClusterMaxShiftDist=0.178634;ClusterMaxSizeDiff=0.178634;ClusterMaxEditDist=0.323102;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=302;DistBack=21211;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=108;REFWIDENED=22:48513123-48513230;PctSeqSimilarity=0.9769;PctSizeSimilarity=0.9967;PctRecOverlap=0.7096;SizeDiff=1;StartDistance=-87;EndDistance=-87;GTMatch=0;TruScore=89;MatchId=3515.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:82:1/1:0:12:0:22:./.:1:17:0:16:./.:0:4:1/1:1:22:.:.:.
chr22	49016402	HG3_PB_SVrefine2Falcon1Dovetail_12269	C	CCACACCCCCTACCCATCCTATCCACCCACCCACCATCCCCCATCCTATCCACCCACCCACCATCCACCATCCATCCACCACCCCCACATCCATCCTATCTACTCACCCCCATACCCATCCTATCCACCCACCCACCATCCCCCATCGTATCCACCCACCCACCATCCCCCATCCTATCTACCCCCCACCATCCCCCATCCTATCCACCCCCCACCATCCCCCATCCTATCCACCCACCCACCATCCCCCATCCTATCCACCCCCCACCATCCCATCCTATCCACCCCCCCACATCCATCCTATCCACCCACCCACCCACCATCCACCATCCTATCCACCCACCCATCATCCACTATCCATCCACCACCCCCACACCCATCCTATCCACCCACCCATCATCCACCATCCACTCACCTCCATCCACTATCCATCCACCCACCCGCCATCCACCCACCATCCCCCATCCACCTACTCACCCACCCGTTCTATACATCTACCTACCCATTCTGTCTGTCCACCCACCCATCATATCCATCCACCCACCTACCCATCCATCCTATCCATCCACCCATCCACCCACCGTATCTATCCACCCACCCACACTGTCCATCCACCCACCCACCCATCCACCCACCCACCTATCCTATTCATCCATCCACCCACCCACCCTATCTATCCACCCACCCACCCACACTATCCATCCACCCACCCAACCACCCATCCTATTCATCCATCCATCCACCCACCCAGTCTATCCACCCACCCACCTATCCTATTCATCCATCCCCCCACCCACCTATCTATCCACCCACCCACACACCCACACTATCCACCCACCCACACACCCTATCTACCCACCCAATATATCCACCCACCCACCTACACCATCCACCCACCCACCCTATCTATCCACCCACCCACACTATCCATCCACCCACTATCCTATCATCATCCATCCACCTACCCAGCCAATTTAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9790:HG4_PB_pbsv_19649:HG2_PB_PB10Xdip_19691:HG3_PB_pbsv_19402:HG4_PB_HySA_28231:HG3_PB_HySA_29312:HG2_PB_SVrefine2PBcRplusDovetail_7153:HG2_PB_SVrefine2PB10Xhap12_14428:HG3_PB_SVrefine2PBcRDovetail_9727:HG2_PB_SVrefine2Falcon1plusDovetail_7712:HG3_PB_SVrefine2Falcon1Dovetail_12269:HG4_PB_SVrefine2Falcon1Dovetail_12282;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_12269;NumExactMatchSVs=1;ClusterMaxShiftDist=0.213043;ClusterMaxSizeDiff=0.213043;ClusterMaxEditDist=0.276087;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=977;DistBack=-467;DistForward=38;DistMin=-467;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=467;REFWIDENED=22:49016403-49016869;PctSeqSimilarity=0.9612;PctSizeSimilarity=0.9386;PctRecOverlap=0.8321;SizeDiff=60;StartDistance=-134;EndDistance=-134;GTMatch=0;TruScore=91;MatchId=3516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:78:1/1:2:23:2:11:./.:2:56:8:74:0/1:8:1:0/1:12:49:.:1888:.
chr22	49062302	HG3_Ill_SVrefine2DISCOVARDovetail_13764	A	AATACTGAGGCCTGTGACCAAGCAATACTGAGGCCCGTGACCAGGCGATACTGAGGCCCGTGACCAGCCGATACTGAGGCCCGTGACCAGGCGTTACTGAGGCCCGTGACCAGGCG	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_13764:HG2_PB_SVrefine2Falcon2Bionano_9791:HG2_Ill_SVrefine2DISCOVARplusDovetail_8202:HG2_10X_SVrefine210Xhap12_13686:HG2_PB_SVrefine2Falcon1plusDovetail_7713:HG2_PB_HySA_35519:HG3_PB_HySA_29313:HG2_Ill_MetaSV_3129:HG3_Ill_MetaSV_3286:HG3_PB_pbsv_19403:HG2_PB_pbsv_19721:HG3_PB_SVrefine2PBcRDovetail_9728:HG3_PB_SVrefine2Falcon1Dovetail_12270;NumClusterSVs=13;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_13764:HG3_PB_SVrefine2PBcRDovetail_9728:HG3_PB_SVrefine2Falcon1Dovetail_12270;NumExactMatchSVs=3;ClusterMaxShiftDist=0.133929;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.278027;PBcalls=8;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=115;DistBack=4420;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=100;REFWIDENED=22:49062303-49062402;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:22:0|1:37:4:3:16:1|0:0:19:12:0:0/1:14:12:./.:.:.:.:.:.
chr22	49074702	HG2_PB_SVrefine2Falcon1plusDovetail_7716	T	TGTCCATCCCTCTCCCGGCTCCCCGGCTCCCCAGCTCCCCGTCCATCCGTCTCCCAGCTCTGCGTCCATCCCTCTCCCGTCTCCCCGTCCATCCCTCTCCCGGCTCCCCGTCCATCCCTCTCCCGGCTCCGCGTCCATCCCTCTCCTGGTTCCCCAGCTCCCCCTCCATCCCTCTCCCGTCTCCCTGTCCATCCCTCTCCTGGTCCCTGTCCATCCCTCTCCTGTCTCCCCGTCCATCCCTCTCCCGGCTCCCTGGCTCCCCAGCTCCCCGTCCATCCCTCTCCCAGCTCTGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9730:HG3_PB_HySA_29314:HG3_PB_HySA_29315:HG2_PB_HySA_35520:HG2_PB_pbsv_19723:HG2_PB_PB10Xdip_19697:HG4_PB_HySA_28233:HG2_PB_SVrefine2PBcRplusDovetail_7154:HG2_PB_SVrefine2PB10Xhap12_14431:HG2_PB_SVrefine2Falcon1plusDovetail_7716:HG4_PB_SVrefine2Falcon1Dovetail_12285:HG2_PB_SVrefine2Falcon1plusDovetail_7715:HG2_PB_SVrefine2PB10Xhap12_14430:HG2_PB_SVrefine2Falcon2Bionano_9793;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7716:HG2_PB_SVrefine2PB10Xhap12_14431:HG2_PB_SVrefine2PBcRplusDovetail_7154;NumExactMatchSVs=3;ClusterMaxShiftDist=0.195893;ClusterMaxSizeDiff=0.192733;ClusterMaxEditDist=0.333874;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=292;DistBack=-692;DistForward=-1;DistMin=-692;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=905;REFWIDENED=22:49074703-49075607;PctSeqSimilarity=0.9667;PctSizeSimilarity=0.9733;PctRecOverlap=0.3787;SizeDiff=-8;StartDistance=-183;EndDistance=-183;GTMatch=1;TruScore=77;MatchId=3518.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:94:1/1:6:34:1:26:1/1:0:6:0:7:./.:0:3:./.:.:.:.:.:.
chr22	49122453	HG3_Ill_GATKHCSBGrefine_12574	G	GGTGGTGGGCTGGACAGGTGAACTACCTTACATACAGAAATAATCCAGTCGTGGTAGTCTGTACAGGAGAATCACTGGTCCAGTA	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_12742:HG3_PB_HySA_29319:HG3_Ill_GATKHCSBGrefine_12574:HG2_PB_assemblyticsfalcon_16986;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12742:HG3_Ill_GATKHCSBGrefine_12574:HG2_PB_assemblyticsfalcon_16986;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0118343;ClusterMaxSizeDiff=0.0118343;ClusterMaxEditDist=0.0710059;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=84;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=357;REFWIDENED=22:49122198-49122554;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3519.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:52:0|1:33:5:3:42:./.:2:3:7:1:0/1:26:6:./.:.:.:.:.:.
chr22	49193274	HG2_10X_SVrefine210Xhap12_13689	T	TAGGACACTCTTAACAGTGAGCCAAGAGGAGCACAGCTGCCTGGCAGGCACGGGCGGTTGTGTGTTCCGGACTCACCTGCATGGGCTGCGGGGCTGCTGGCTCCAGGACC	20	PASS	ClusterIDs=HG2_PB_HySA_35531:HG3_PB_SVrefine2Falcon1Dovetail_12278:HG2_PB_pbsv_19728:HG4_PB_pbsv_19657:HG4_PB_SVrefine2Falcon1Dovetail_12290:HG4_PB_HySA_28241:HG2_10X_SVrefine210Xhap12_13689;NumClusterSVs=7;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13689:HG4_PB_HySA_28241;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.188341;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=109;DistBack=9244;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=83;REFWIDENED=22:49193275-49193357;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3520.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:17:0|1:27:0:0:15:0|1:6:0:1:19:0/1:32:16:./.:.:.:.:.:.
chr22	49352636	HG2_Ill_SVrefine2DISCOVARplusDovetail_8206	G	GCACCACACACCACACACACCACCAACCAAAACCACACAACCCACCCCCACACACACTCCCACACCCCCACACACATCACATACACACACACACACATGCCCATACCCTACAACCACACCATAAACCACACATCACACACATACACATACACAAGCATAAACACACTACATCACATACACACATACACCAGAACCATACCCACACTGCACTCACATACAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12286:HG4_PB_pbsv_19666:HG2_PB_pbsv_19737:HG3_PB_pbsv_19419:HG2_PB_PB10Xdip_19710:HG4_PB_HySA_28250:HG2_PB_HySA_35551:HG3_Ill_GATKHCSBGrefine_12586:HG2_Ill_manta_5180:HG2_Ill_GATKHCSBGrefine_12750:HG4_PB_SVrefine2Falcon1Dovetail_12298:HG4_Ill_GATKHCSBGrefine_13182:HG3_Ill_manta_4201:HG2_PB_SVrefine2Falcon1plusDovetail_7725:HG2_PB_SVrefine2Falcon2Bionano_9801:HG2_PB_SVrefine2PB10Xhap12_14443:HG2_PB_SVrefine2PBcRplusDovetail_7163:HG4_PB_SVrefine2PBcRDovetail_9919:HG4_Ill_SVrefine2DISCOVARDovetail_13548:HG3_Ill_SVrefine2DISCOVARDovetail_13772:HG2_Ill_SVrefine2DISCOVARplusDovetail_8206:HG4_PB_SVrefine2Falcon1Dovetail_12297:HG3_PB_SVrefine2PBcRDovetail_9736;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8206:HG3_Ill_SVrefine2DISCOVARDovetail_13772:HG4_Ill_SVrefine2DISCOVARDovetail_13548:HG4_PB_SVrefine2PBcRDovetail_9919;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0737327;ClusterMaxSizeDiff=0.0737327;ClusterMaxEditDist=0.165138;PBcalls=15;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=219;DistBack=395;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=265;REFWIDENED=22:49352637-49352901;PctSeqSimilarity=0.9685;PctSizeSimilarity=0.9863;PctRecOverlap=0.7626;SizeDiff=3;StartDistance=-51;EndDistance=-51;GTMatch=1;TruScore=90;MatchId=3521.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:8:36:1/1:5:19:2:14:./.:108:456:68:598:./.:0:0:./.:.:.:.:.:.
chr22	49425456	HG2_PB_SVrefine2Falcon2Bionano_9804	T	TAAGAAAACTCCTGCTCTCCCTCCTCTCCCTCTCCCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCCACGGTCTCCCTCTCCCCACGGTCTCCCTCTCCCTCTCTTTCCACGGTCTCCCCCTGATGCTGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGTGCCGCCACGCCTGACTGGTTTTCGTATTTTTTTGGTGGAGACAGGGTTTCGCTGTGTTGGCTGGGCTGGTCTCCAGCTCCTAATCACGAGTGATCCGCCAGCCTTGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGACGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTGCCAGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCTGCCACCCCGTCTGGGATGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCACACCCTCTGAGAAGTGAGGAGCGTCTCTGCCTGGCAGCCACCCCGTCTGGGAGGGAGGTGGGGGTCAGCCCCCTGCCCCGCCAGCTGCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCTGCCTCGTCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTTGGGGAGGGAGGTGGGGGGGACAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCGGGGAGGGAGGTGGGGGGGACAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTACTCAACAGCTCATTGAGAACGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGGGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAGGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTGAATGGATTAAGGGTGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTATCTGCTGACCTTCCCTCCACTATTGTCCTGTGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_14446:HG2_PB_pbsv_19739:HG3_PB_pbsv_19421:HG3_PB_HySA_29336:HG2_PB_assemblyticsfalcon_17010:HG2_PB_SVrefine2Falcon2Bionano_9804:HG2_PB_SVrefine2PBcRplusDovetail_7165:HG2_PB_SVrefine2Falcon1plusDovetail_7728:HG2_PB_HySA_35553:HG2_Ill_breakscan11_5022:HG2_PB_PB10Xdip_19714;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9804;NumExactMatchSVs=1;ClusterMaxShiftDist=0.160533;ClusterMaxSizeDiff=0.159374;ClusterMaxEditDist=0.227922;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=1802;DistBack=-1;DistForward=16;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=17;REFWIDENED=22:49425457-49425473;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:44:0|1:26:0:0:36:1|0:0:6:27:0:./.:27:4:0/1:52:171:.:1803:.
chr22	49545313	HG4_Ill_GATKHC_30656	G	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_25535:HG4_PB_HySA_28259:HG2_PB_HySA_35561:HG4_Ill_svaba_23835:HG4_Ill_GATKHC_30656:HG4_Ill_GATKHCSBGrefine_13185:HG2_Ill_Krunchall_25819:HG2_Ill_GATKHC_30748;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25535:HG4_Ill_svaba_23835:HG4_Ill_GATKHC_30656:HG4_Ill_GATKHCSBGrefine_13185:HG2_Ill_Krunchall_25819:HG2_Ill_GATKHC_30748;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0550459;ClusterMaxSizeDiff=0.0550459;ClusterMaxEditDist=0.0720721;PBcalls=2;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=52;DistBack=409;DistForward=2495;DistMin=409;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=70;REFWIDENED=22:49545284-49545353;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:14:./.:24:5:3:8:./.:14:0:2:6:0/1:15:5:./.:.:.:.:.:.
chr22	49622511	HG2_Ill_svaba_23970	C	CATCTTTATTTATTTGCTATTTTTTGATGTACCAAAAGCTGTACATAATTAATGTACAGAACTCAATGAGTTTGGG	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23985:HG2_PB_pbsv_19748:HG4_PB_pbsv_19679:HG4_Ill_svaba_23848:HG4_Ill_manta_4386:HG4_Ill_Krunchall_26124:HG4_Ill_GATKHC_30664:HG4_Ill_GATKHCSBGrefine_13186:HG4_Ill_250bpfermikitraw_25121:HG4_Ill_150bpfermikitraw_24141:HG2_PB_assemblyticsfalcon_17022:HG2_Ill_svaba_23970:HG2_Ill_SpiralSDKrefine_10672:HG2_Ill_Krunchall_25828:HG2_Ill_GATKHC_30760:HG2_Ill_250bpfermikitraw_25543;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23985:HG4_Ill_svaba_23848:HG4_Ill_manta_4386:HG4_Ill_Krunchall_26124:HG4_Ill_GATKHC_30664:HG4_Ill_GATKHCSBGrefine_13186:HG4_Ill_250bpfermikitraw_25121:HG4_Ill_150bpfermikitraw_24141:HG2_PB_assemblyticsfalcon_17022:HG2_Ill_svaba_23970:HG2_Ill_SpiralSDKrefine_10672:HG2_Ill_Krunchall_25828:HG2_Ill_GATKHC_30760:HG2_Ill_250bpfermikitraw_25543;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0774194;ClusterMaxSizeDiff=0.0387097;ClusterMaxEditDist=0.166667;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=75;DistBack=6471;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=16;REFWIDENED=22:49622501-49622516;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3524.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:24:./.:18:13:8:4:0|1:16:0:1:31:0/1:25:35:./.:.:.:.:.:.
chr22	49633579	HG2_PB_SVrefine2Falcon2Bionano_9807	T	TCCCTCCCTCCCCACCTCCCTCTCTCCCTCCCTTCCTCTCTCCCTCCCTCCCTCTCTCTCCCTCCCTTCCTCTCTCCCTCCCTCCCTCTCTCTCCCTCCCTTCCTCTCTCCCTCCCTCCCTCTCTCTCTATCCCTCCCTCCCTCTCTCTCCCTCCCTTCCTCTCTACCTCCCTCCCTCTCTCTCCCTCCCTTCCTCTCTCCCTCCCTCCCTCTCTCTCCCTCCATCCCCACCTCCTTCCCTCCCTCTCTCCCTCCCTACCCTCCCCTCCCTTTCTCCCTTCCTCCCCACCTCCCTCTCTCCCTCCCTCTCTCCCTCCCTCCCTCCTTCTCTCCTTCTCTTCCTCTCTCCCTCCCTA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12293:HG2_PB_HySA_35573:HG3_PB_SVrefine2PBcRDovetail_9743:HG4_PB_HySA_28265:HG2_PB_pbsv_19749:HG4_PB_pbsv_19680:HG3_PB_SVrefine2PBcRDovetail_9742:HG2_PB_HySA_35571:HG2_PB_PB10Xdip_19722:HG2_PB_HySA_35572:HG2_PB_SVrefine2Falcon2Bionano_9807:HG2_PB_SVrefine2Falcon1plusDovetail_7731:HG4_PB_SVrefine2Falcon1Dovetail_12306:HG2_PB_assemblyticsPBcR_16464:HG2_PB_assemblyticsfalcon_17023:HG3_PB_pbsv_19427:HG4_PB_SVrefine2PBcRDovetail_9926:HG2_PB_SVrefine2PBcRplusDovetail_7170:HG2_PB_SVrefine2PB10Xhap12_14449;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9807:HG3_PB_SVrefine2PBcRDovetail_9742;NumExactMatchSVs=2;ClusterMaxShiftDist=0.383333;ClusterMaxSizeDiff=0.383333;ClusterMaxEditDist=0.388889;PBcalls=19;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=355;DistBack=-40;DistForward=22;DistMin=-40;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=40;REFWIDENED=22:49633580-49633619;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:2:39:1:20:1/1:0:8:0:16:./.:0:7:1/1:2:29:.:.:.
chr22	49653199	HG2_PB_HySA_35575	A	AAAATATATTATATTAATAATATATTATCTAAAATATATTATATTAATAATATATTATCTAAAATATATTATATTAATAATATATTATCTAAAATATATTATATTAATAATATATTATCTAAAATATATTATATTAATAATATATTATCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9808:HG2_PB_assemblyticsfalcon_17024:HG2_PB_SVrefine2Falcon1plusDovetail_7732:HG2_PB_HySA_35575:HG2_PB_pbsv_19750:HG3_PB_HySA_29357;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_35575;NumExactMatchSVs=1;ClusterMaxShiftDist=0.047138;ClusterMaxSizeDiff=0.047138;ClusterMaxEditDist=0.113333;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=149;DistBack=16;DistForward=49;DistMin=16;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=157;REFWIDENED=22:49653175-49653331;PctSeqSimilarity=0.9972;PctSizeSimilarity=0.9933;PctRecOverlap=0.8278;SizeDiff=-1;StartDistance=25;EndDistance=25;GTMatch=0;TruScore=93;MatchId=3526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:34:0|1:20:5:2:28:./.:0:3:5:0:0/1:13:12:./.:.:.:.:.:.
chr22	49760387	HG2_Ill_150bpfermikitraw_23992	C	CCCCTTCCTGGCTCTCGGACCCTCCTGGCCACGTCATCAGACCCTCTCCTCCCTG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13703:HG2_PB_pbsv_19758:HG3_Ill_svaba_24224:HG3_PB_pbsv_19434:HG3_Ill_manta_4207:HG3_Ill_GATKHC_30701:HG3_Ill_250bpfermikitraw_24817:HG3_Ill_150bpfermikitraw_24063:HG2_Ill_svaba_23975:HG2_Ill_Krunchall_25836:HG2_Ill_250bpfermikitraw_25551:HG2_Ill_150bpfermikitraw_23992:HG2_Ill_SVrefine2DISCOVARplusDovetail_8216;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23992:HG2_Ill_250bpfermikitraw_25551:HG2_Ill_Krunchall_25836:HG2_Ill_svaba_23975:HG3_Ill_150bpfermikitraw_24063:HG3_Ill_250bpfermikitraw_24817:HG3_Ill_GATKHC_30701:HG3_Ill_manta_4207:HG3_Ill_svaba_24224;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.234234;PBcalls=2;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=54;DistBack=5073;DistForward=23;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=103;REFWIDENED=22:49760372-49760474;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3527.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:28:0|1:29:2:1:20:./.:3:9:14:0:0/1:12:9:./.:.:.:.:.:.
chr22	50063334	HG2_PB_SVrefine2PB10Xhap12_14464	C	CATTTACAAACCTTGAGCTAGACACAGGGTGCTGATTGGTGCATTTACAAACCTTGAGCTAGACACAGAGTGCTGATTGGTGTATTTACAATCCCTTAGCTAGACATAAAGGTTCTCCAAGTCCCCAACAGATTAGCTAGATACAGAGTGCTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_14464:HG2_PB_PB10Xdip_19748:HG2_PB_HySA_35605:HG2_PB_pbsv_19770:HG4_PB_HySA_28283:HG3_PB_pbsv_19443:HG4_PB_SVrefine2Falcon1Dovetail_12321:HG4_PB_SVrefine2PBcRDovetail_9936:HG4_Ill_SVrefine2DISCOVARDovetail_13565:HG3_PB_SVrefine2Falcon1Dovetail_12309;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14464:HG4_PB_SVrefine2PBcRDovetail_9936:HG4_Ill_SVrefine2DISCOVARDovetail_13565:HG3_PB_SVrefine2Falcon1Dovetail_12309;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.038961;ClusterMaxEditDist=0.279221;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=152;DistBack=203;DistForward=197;DistMin=197;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=435;REFWIDENED=22:50063335-50063769;PctSeqSimilarity=0.9889;PctSizeSimilarity=1;PctRecOverlap=0.5229;SizeDiff=0;StartDistance=-73;EndDistance=-73;GTMatch=0;TruScore=83;MatchId=3528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:39:1|0:3:26:16:4:./.:2:2:3:0:0/0:12:1:./.:.:.:.:.:.
chr22	50320243	HG2_PB_SVrefine2PB10Xhap12_14468	G	GCCTCTTGCCCCTCCCTCCCCCCACCCTCGGTCCCCTCTTGCCCCTCCCTCCCACCACCCTGGGTCCCCTCTTGCCCCTCCCTCCCCCCACCCCGGGTCCCCTCTTGCCCCTCCCTCCCCCCACCCCGGGTCCCCTCTTGCCCCTCCCTCCCCCCCACCCCGGGTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_14468:HG4_PB_SVrefine2PBcRDovetail_9942:HG4_PB_HySA_28289:HG3_PB_HySA_29387:HG2_PB_SVrefine2Falcon2Bionano_9822:HG2_PB_PB10Xdip_19754:HG2_PB_pbsv_19775:HG3_PB_SVrefine2Falcon1Dovetail_12314:HG4_PB_pbsv_19702:HG4_PB_SVrefine2Falcon1Dovetail_12325:HG2_PB_SVrefine2Falcon1plusDovetail_7749:HG3_PB_SVrefine2PBcRDovetail_9756:HG2_PB_SVrefine2PBcRplusDovetail_7183;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14468:HG3_PB_SVrefine2PBcRDovetail_9756:HG2_PB_SVrefine2PBcRplusDovetail_7183;NumExactMatchSVs=3;ClusterMaxShiftDist=0.289389;ClusterMaxSizeDiff=0.289389;ClusterMaxEditDist=0.367213;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=166;DistBack=4338;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=337;REFWIDENED=22:50320244-50320580;PctSeqSimilarity=0.9708;PctSizeSimilarity=0.9274;PctRecOverlap=0.3073;SizeDiff=-13;StartDistance=-118;EndDistance=-118;GTMatch=0;TruScore=73;MatchId=3529.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:./.:0:0:0:5:./.:0:2:0:1:./.:0:1:./.:.:.:.:.:.
chr22	50502152	HG3_PB_SVrefine2PBcRDovetail_9762	G	GGGCCACTCACCTCCCCAGTGCCCCCACCCCACAGGCTTCTCACCTCCCTGGCTGGGCCCCCCATGGGCCACTCACCTCCCCAGCACCTGCACCGCAGGCCACTCACCTCCCCAGCTGGGCACCCCTGTGGGCCACTCACCTCCCCAGCGCCCCCACCCCACAGGCTTCTCACCTCCCTGGCTGGGCTCCCCCGTGGGCCACTCACCTCCCCAGCGCCCCCACCGCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12333:HG3_PB_pbsv_19458:HG2_PB_HySA_35624:HG2_PB_pbsv_19780:HG2_PB_PB10Xdip_19765:HG4_PB_pbsv_19709:HG4_PB_SVrefine2PBcRDovetail_9946:HG3_PB_SVrefine2PBcRDovetail_9762:HG3_PB_SVrefine2Falcon1Dovetail_12321:HG2_PB_SVrefine2PB10Xhap12_14474:HG2_PB_SVrefine2Falcon2Bionano_9825:HG2_PB_SVrefine2PBcRplusDovetail_7187:HG2_PB_SVrefine2Falcon1plusDovetail_7755;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14474:HG3_PB_SVrefine2Falcon1Dovetail_12321:HG3_PB_SVrefine2PBcRDovetail_9762:HG4_PB_SVrefine2PBcRDovetail_9946;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0775862;ClusterMaxSizeDiff=0.0603448;ClusterMaxEditDist=0.27409;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=226;DistBack=1515;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=318;REFWIDENED=22:50502153-50502470;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9826;PctRecOverlap=0.7186;SizeDiff=-4;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=89;MatchId=3530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:42:1/1:2:17:2:14:./.:1:19:2:18:./.:0:2:./.:.:.:.:.:.
chr22	50789721	HG2_Ill_GATKHCSBGrefine_12773	G	GGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCGGCCATAGAACAGTGGGCTTAAACTGTTTAGTAGGCTGGGCACAGTGGCTCATGCCTGTAATCCCAGCACTTTGGAAGGCCAAGGCGGGCAGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACACCATCTCTACTGAAAATACAAAAAGTAGCTGGGCATGGTGGCGCACGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGAGGCTGAGGCAGGAGAATTGAACCTGGTAGGCAGAGGTTGCGGTGAACCGAGATTGCGCTATTGCACTTCAGCCTGGGCGACGAGTGAAACTCCTCCGTCTGAAAAACGAAAAACAACCCTATTCAGTAAACCATGCTGTAAACAGATGTATTGTCATTTAGGTATTGTTGTTCCCTTAACAACAAAGCACGGGGTAGATGTAGCATAATTCGTGTTTCTTTTTTATTTTTATCTATTTTTTTTGAGATGGAGTCTTTCTGTCACCAGGCTGGAGTGCAGCGGTGCGATCTTGGCTCACTGCAACCTCCGCCTCCCAGGTTTAAGCAATTCTCCTGTCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCTGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTGGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCAATATCCTGACCTCGTGATCCTCCCGCCTCA	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9953:HG4_PB_pbsv_19721:HG4_Ill_GATKHCSBGrefine_13207:HG2_PB_pbsv_19794:HG2_Ill_MetaSV_3137:HG3_PB_pbsv_19474:HG2_Ill_GATKHCSBGrefine_12773:HG3_Ill_GATKHCSBGrefine_12609:HG2_Ill_SVrefine2DISCOVARplusDovetail_8243:HG2_PB_SVrefine2Falcon2Bionano_9833:HG4_Ill_SVrefine2DISCOVARDovetail_13576:HG2_PB_SVrefine2PBcRplusDovetail_7194:HG2_PB_SVrefine2Falcon1plusDovetail_7762:HG3_PB_SVrefine2Falcon1Dovetail_12329:HG3_Ill_SVrefine2DISCOVARDovetail_13794:HG2_10X_SVrefine210Xhap12_13735:HG4_PB_SVrefine2Falcon1Dovetail_12342:HG3_PB_SVrefine2PBcRDovetail_9769;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12773:HG2_Ill_MetaSV_3137:HG4_Ill_GATKHCSBGrefine_13207;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0667976;ClusterMaxSizeDiff=0.0667976;ClusterMaxEditDist=0.234223;PBcalls=10;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=737;DistBack=-47;DistForward=-1;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=311;REFWIDENED=22:50789458-50789768;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9946;PctRecOverlap=0.9946;SizeDiff=-4;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3533.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:34:./.:0:27:0:3:./.:1:8:0:3:1/1:0:24:1/1:3:78:.:681:.
chr22	50933766	HG3_Ill_SVrefine2DISCOVARDovetail_13797	T	TTTTTCTTTTTTTTTTTCGAGACGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCACTGCAACCTCTGCCTCCTGCGTTCAAGTGAATCTCCTGCCTCACCCTCCCCAGTTGCTGGGATTACAGGTGCCCACCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTGGTCAGGCTGGTCTTGAACTCCTGAACTCAGGTAATCCACCTGCCTCGGCCTCCCAAAGGGTTGGGATAACAGGTGTGAGCCACCGCGCTCGGCTCTAATTTTTCAAAATAACTTTATTAAGAAACAGAGGATGGGCCAGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGATCATGAGGTCAGGAGATCAAGACCATCCTGGCTGACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGACAGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGTGGTGACACAGCGAGCTCCATCTCAAAAAAAAAAAAAAAAGAAAAGAAAGAAAGAGAGGAGGCTGAGTGAGGTGGCTTATGCCCGTAATCCCAGCACTTTGGGAGGCCAAGGCAGCAGGATCGCTTGAGGTCAGGAATTCGAGACCAGGCTGGCTAACATGTTGAGACCCTATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCACGCACCTGTAATTCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCACAGTTTACAGTGAACAGAGATCACACCAGTGCACTCCAGCCTGGGTAACAGAGGGAGACTCAGTCTCAAAAACAAACAAACAAACACACACACACACACACACAAAAACAGGAAAGATACATAATTCATAACCAAAGGAATGGAAGGGTTTACAGCACATTTGCTATACCCCATGGCAACTTAGAGAAATGGGCTGGGCTGGCACCCATGACAAGGCACCAAAGCCCTGATTCCTCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7766:HG4_PB_pbsv_19726:HG2_PB_HySA_35652:HG3_PB_pbsv_19482:HG2_PB_pbsv_19800:HG3_Ill_GATKHCSBGrefine_12610:HG4_Ill_GATKHCSBGrefine_13209:HG3_PB_HySA_29420:HG2_PB_PB10Xdip_19776:HG2_PB_SVrefine2PB10Xhap12_14484:HG3_PB_SVrefine2PBcRDovetail_9773:HG3_Ill_SVrefine2DISCOVARDovetail_13797:HG2_PB_SVrefine2Falcon2Bionano_9836:HG2_Ill_SVrefine2DISCOVARplusDovetail_8244:HG3_PB_SVrefine2Falcon1Dovetail_12334:HG2_10X_SVrefine210Xhap12_13737:HG4_PB_SVrefine2Falcon1Dovetail_12347:HG4_PB_SVrefine2PBcRDovetail_9956:HG2_PB_SVrefine2PBcRplusDovetail_7197;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8244:HG2_PB_SVrefine2Falcon2Bionano_9836:HG3_Ill_SVrefine2DISCOVARDovetail_13797:HG3_PB_SVrefine2PBcRDovetail_9773;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0417592;ClusterMaxSizeDiff=0.0417592;ClusterMaxEditDist=0.236339;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=1111;DistBack=6453;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=299;REFWIDENED=22:50933767-50934065;PctSeqSimilarity=0.9923;PctSizeSimilarity=0.9982;PctRecOverlap=0.892;SizeDiff=2;StartDistance=-119;EndDistance=-119;GTMatch=0;TruScore=96;MatchId=3534.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:73:1/1:0:30:1:24:./.:0:0:0:0:1/1:0:12:0/1:21:169:.:1443:.
chr1	1000693	HG4_PB_SVrefine2Falcon1Dovetail_11	G	GCGGGGCCCTGGGGGGTGTGGTGGGGTCTGCGGGCCCTGGGGGGGTGTGGTGGGGTCTGCGGGGGCCCTGGGGGGGTGGGGGGTCTGCGGGGCCCTGGGGGGGTGGTGGGGTCTGCGGGGCCCTGGTGGGGTGTCTGCGGGCCCTGGGGGGTGTGGTGGGGTCTGCGGGCCCTGGGGGGGGGTGGGTCTGCGGGGCCTGGGTGTTGTGGTGGGTCTGCGGGCCCTGGGGGTGTGTGTGGGGTCTGCGGGGCCCTGGGGGGTGTGGTGGGGTCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9:HG2_PB_SVrefine2Falcon1plusDovetail_19:HG3_PB_assemblyticsfalcon_22:HG4_PB_assemblyticsfalcon_19:HG4_PB_SVrefine2Falcon1Dovetail_11:HG3_PB_SVrefine2Falcon1Dovetail_13;NumClusterSVs=6;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_11;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0722022;ClusterMaxSizeDiff=0.0640569;ClusterMaxEditDist=0.274368;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=272;DistBack=8;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=470;REFWIDENED=1:1000233-1000702;PctSeqSimilarity=0.9474;PctSizeSimilarity=0.9097;PctRecOverlap=0;SizeDiff=-27;StartDistance=293;EndDistance=293;GTMatch=0;TruScore=61;MatchId=2.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:19:./.:4:0:14:15:./.:1:0:11:0:./.:4:2:./.:.:.:.:.:.
chr1	2078502	HG2_PB_SVrefine2Falcon1plusDovetail_44	T	TCATCTGTTGTCCACTGACCTCTCCATCTATCCATGTATCTATTGTCCACTGACCACTCCATCTATCCATCTATTGTCCACTGACCTCTCCGTCTATCCGTCTATTGTCCACTGACCTCTCCATCCAACCGTCTATTGTCCACTGACCTCTCCATCTATCCATC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_44:HG4_PB_SVrefine2Falcon1Dovetail_35:HG3_PB_SVrefine2PBcRDovetail_33:HG3_Ill_SVrefine2DISCOVARDovetail_22;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_44:HG4_PB_SVrefine2Falcon1Dovetail_35:HG3_PB_SVrefine2PBcRDovetail_33:HG3_Ill_SVrefine2DISCOVARDovetail_22;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=163;DistBack=4618;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1081;REFWIDENED=1:2078503-2079583;PctSeqSimilarity=0.9409;PctSizeSimilarity=0.9939;PctRecOverlap=0;SizeDiff=1;StartDistance=-657;EndDistance=-657;GTMatch=0;TruScore=64;MatchId=9.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:22:0|1:14:3:5:27:./.:6:2:3:4:./.:17:2:./.:.:.:.:.:.
chr1	2143633	HG3_PB_pbsv_50	A	ACACCGTGCCCGGCCAGTTTTTTATATTTTTTTAGAGACGGGGTTTCATCATGAGTTGCCAGGCTGGTCTTCAAAACTTTCCTGGACCTCAGGTTGATCCACTGCCTCGGCCTCCCAAAGTGCAGGGGATTACAGGCAGTGAGCCACCAGTGCGCTGGCCGAGAGCAAGCTGCTGCTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTTTGTCGCCCAGGCTGGATGCAGTAGTGTGATCTCGGGCTCACTGGCAAGCTCCACCCGTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGACTACAGGCGCCCGCCACACGCCCGCTAATTTGTTTTTTTGTAATTTTAGGAGCGACAGGGTTTCACCGTGTTAGCACAGTTTGTCTCGATCTCCTGACCTCTGTGATCCTGCCCGCTCAGCCTTCCCAAAGTGCTGGATTACAGGCGTGAGGC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_34:HG3_PB_assemblyticsfalcon_63:HG3_PB_pbsv_50:HG3_PB_SVrefine2Falcon1Dovetail_40:HG3_PB_HySA_67:HG2_PB_pbsv_50:HG2_PB_PB10Xdip_929:HG4_PB_SVrefine2Falcon1Dovetail_36:HG2_Ill_MetaSV_8:HG2_PB_SVrefine2PB10Xhap12_40:HG2_PB_SVrefine2PBcRplusDovetail_35:HG2_PB_SVrefine2Falcon1plusDovetail_45;NumClusterSVs=12;ExactMatchIDs=HG3_PB_pbsv_50;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0765957;ClusterMaxSizeDiff=0.0723404;ClusterMaxEditDist=0.229787;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=471;DistBack=463;DistForward=1540;DistMin=463;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=751;REFWIDENED=1:2142884-2143634;PctSeqSimilarity=0.9775;PctSizeSimilarity=0.9809;PctRecOverlap=0.0042;SizeDiff=9;StartDistance=465;EndDistance=465;GTMatch=0;TruScore=65;MatchId=10.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:14:24:./.:10:7:3:17:./.:17:0:11:1:0/0:39:2:0/1:8:7:.:.:.
chr1	7017756	HG3_PB_pbsv_159	C	CTCCTAGTTCTTTCAAGAGAACATCATAGTTCTCTGACTTCTCCTCTGCCTCTTCTTAATCTTTTCCATTTTGTAAGGCATAGTGATTCATGGGATACATGAGTAACTAAGGCGTGATTGTTT	20	PASS	ClusterIDs=HG2_PB_HySA_275:HG3_PB_pbsv_159:HG2_PB_SVrefine2PB10Xhap12_138:HG2_10X_SVrefine210Xhap12_95:HG3_PB_HySA_203:HG2_PB_pbsv_156:HG2_PB_PB10Xdip_2582:HG2_PB_SVrefine2PBcRplusDovetail_108;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_159;NumExactMatchSVs=1;ClusterMaxShiftDist=0.177419;ClusterMaxSizeDiff=0.177419;ClusterMaxEditDist=0.321285;PBcalls=7;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=122;DistBack=32;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=116;REFWIDENED=1:7017641-7017756;PctSeqSimilarity=0.9533;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=123;EndDistance=123;GTMatch=0;TruScore=65;MatchId=37.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:29:./.:16:6:8:18:./.:23:8:14:0:0/1:36:8:./.:.:.:.:.:.
chr1	39969805	HG2_PB_SVrefine2Falcon1plusDovetail_284	T	TTGAAGGGGGCCTGCCCCTCCACACCTGTGGGTATTTCTCGAAAGGTGGAGATGAGAGACTGAGAAAAGAAATAAGATACAGAGAGACAAAGTATAGAGGAAGAAAAGTGGGCCCAGGGGACCGGCACTCAGCATATGGAGGACCTGCACCGGCACTGGTCTCTGAGTTCCCTCAGTATTTATTGATCACTATCTCTACCATCTCAGCGAGGGGGATGTGGCAGGACTATAGGGTAATGGTGGGGAGAGGGTCAGCAGGAAAACATGTGAGCAAAGGACTCTGTGTCATAAATAAGTTTAAGGAAAGGCGCTGTGCCTCGATGTGCATGTAGGCCAGATTTATGTTTGACTTTACACAAACATCTCAATGCAGTAAAGAGCAGTATTGCCACCAGCATGTCTCAGTCGGTATAGTGTGAGACTCTTAATCTCAGGGTCGTGGGTTCAAGCCCCACATTGGGCGTCAGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_284:HG4_PB_HySA_551:HG2_PB_PB10Xdip_2208:HG2_PB_pbsv_405:HG4_PB_pbsv_414:HG4_PB_SVrefine2PBcRDovetail_235:HG4_PB_SVrefine2Falcon1Dovetail_268:HG2_PB_SVrefine2PB10Xhap12_350;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_284:HG4_PB_SVrefine2PBcRDovetail_235:HG4_PB_SVrefine2Falcon1Dovetail_268:HG2_PB_SVrefine2PB10Xhap12_350;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0616366;ClusterMaxSizeDiff=0.0616366;ClusterMaxEditDist=0.152242;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=467;DistBack=7864;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=862;REFWIDENED=1:39969806-39970667;PctSeqSimilarity=0.9902;PctSizeSimilarity=0.9807;PctRecOverlap=0;SizeDiff=9;StartDistance=-664;EndDistance=-664;GTMatch=0;TruScore=65;MatchId=135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:16:21:./.:8:8:5:12:1/1:0:12:0:11:./.:1:18:0/1:4:8:.:.:.
chr1	82720466	HG2_PB_SVrefine2PB10Xhap12_521	C	CAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATATAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAAAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAATCAAAACCACAATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTCTTACACTGTTGGTGGGACTGTAAACTAGTTTAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCATCATAGGTGGGAATTGAAAAATGAGATCACATGGACACAGGAAGGGAATATCACAGTCTGGGGACTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAATAAAAAAAAAGGCCAACATCAAAGTCTTTTGGTATTTTAAGAATTCTTCTATAAAAACTACATAGTCAACATTTTTGATGGTACAAAGGATGATAGTAAGGAAAAACATCAATAGTAAGACTTAGTCAAATAAGTGATTTGCAACATCAGATTCTGAATTTGAAAAAAATACTAGGTATACCTTTAACAATTTACTTTGCTCATATTTTTATGTTGATCAAGAATGATACATTATAAAATTTATTTATGGTTAATTCTAAAAAACTTCTTTCAGTAAAAAGTCTATGTGATGAAAAAGTTTTGTGTCATAGTTAATTAGCATAATTTTTCTTTCTCAGTGGTACATACAATGATAGTATATCTTAAAATCAATGGCCTCTCAGGTTGATCAAATATAGTAACTATAATGGGAGGCATGGCTGCCCACATATGTGAGTGTCAGTGGGGAGTGCTGAAAATAATGTAAATTCTCATCTTCTCTAGAAGGAAGTCAATATAGATTGCCTAAATGTGAAAAATCAGCAATATAAGTGTACTATTGTATTAGCTCGCTTGGGCTTTCATAACAAAATGCCACAGACTGGTGGCTTAAAGAACAGAAATTTATTTTCTCACAATTCTGGAAGCTAGAAGTTCAAGGTGAAGGTGTCAGTGGTTATTATTCATTTTTAATAGCAAGTATGTATATTATGGGAAAGAGTCAAGAGAGGGGAAATTGACCATGATAAGATTGACTCCTCATCTTGAGAGGCAAATGGAGACTGGAGTATATGGAGTGGCTGGTTCTATGAGACCCGGTAAAGGAGGGTCCGGGTGCCCAGGAGACAGATGTGGGACAGGAGCTCTTAGAAGGTCTTTTGGAGATTCCTTCTATTTCTCAGTGAAATAATATGGAAAGTCATCTGCTGAGGATGAAGGCCAGGAAAAATATTGGGAACTTGAGGAGAAGGAAAAATTGTGAAATAGCCATTTAGGAGAGAGAGTGAATTGACTGAGAGAGGCTGTAGGATTGATATGGGCACACTGAAGTTTAGCAGTCATGAATCTGAAGTAAAGCAAGCCAGCATGTGGCAATTGATCCCAGGCCAGAAATGAGGGATGTAGAATGAGGAAAGGAAAGCACCTAGAATAGCTCCCAAATTTGTGCCTTGAGCAATAGGTAGAACTGGTGCCAGGGGATGTAAGTGGAGACACGGGTGTAGATTGGAGAGTAGAGATGGTATGAATTCAGTTTTTAAGATGTTGACTAAAAAGTGCCTGTAGGATATCCAAGCAGTCTAGTATACAGAATTTTAGGTTTGGTGGGATAAATTCACATCACCAGTACATATAAACATGAATGGAATGCAACTGGCCAGGTAGGATGTTTAGAATGAGCCTCATTGTAGTGTTTGCTGGGTGGAAGATGTCTGTGGGGGTGCTGAGTTATTAAGGAGCATAGCATGAAAGCTATTCAGAAGTGGGGAGGTGAAGGGTTTTTTACAGCATGAGAGGCAAACAGAGCTGAAGAGCTACACCCAATTGTTTGACTGAGGGCCGTGGTGCGTATGAGTCCACTGGTCCAACAGCTCCTCTGTATTGGTGTTGCTTTAATTTCCTTAACACCTATTAGCATTTTACTTAAATACAAACCTAGTTTAATTTATTTTGAAATCTTTTTTGAGTCAGATGTCAGTTGAACAAATACCTAACTGAATATTGTGTTCTTCCAGCTTTCTCTGTACACGGAAATAGTTCTGTTACACAGAAGGTAGTTAACACATGTGTGCCAATTGATTTATTGAAAATACAAACAAAAATGTCTTTATCAAATTTGTTATGTTAAAAATCTATGGTGTT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_358:HG2_PB_HySA_1158:HG2_PB_PB10Xdip_2718:HG2_PB_HySA_1157:HG2_PB_SVrefine2PB10Xhap12_521:HG2_PB_SVrefine2Falcon1plusDovetail_428:HG2_PB_SVrefine2PBcRplusDovetail_422;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_521;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0153257;ClusterMaxSizeDiff=0.0146871;ClusterMaxEditDist=0.0595921;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=3115;DistBack=4571;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1287;REFWIDENED=1:82720467-82721753;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=202.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:28:1/1:1:38:0:13:./.:0:2:2:0:./.:8:0:./.:14:174:.:3113:.
chr1	96730962	HG4_Ill_SVrefine2DISCOVARDovetail_479	C	CATATATTATATAAATTTATATATAATATATTTATATAAATATATTATATATATTTTATATATAAATTATATATATTATATAAAATAAATTATATATAATATATAATGTATTATATATAATATATATATAATGAATTATATATATTATATATATAAAATGAATCATATATAATATATATATAAAATGAATCATATATATTATATATAAAATGAATCATATATACTATATACATAAAATGAATCACATATATTATATACATAAAATGAATCACATATATT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_534:HG4_PB_pbsv_689:HG3_PB_pbsv_694:HG2_PB_pbsv_680:HG4_PB_SVrefine2Falcon1Dovetail_430:HG3_PB_SVrefine2PBcRDovetail_399:HG3_PB_HySA_987:HG2_PB_HySA_1287:HG2_PB_PB10Xdip_2877:HG2_PB_SVrefine2Falcon1plusDovetail_456:HG4_PB_SVrefine2PBcRDovetail_393:HG4_Ill_SVrefine2DISCOVARDovetail_479:HG2_PB_SVrefine2PBcRplusDovetail_461:HG2_PB_SVrefine2PB10Xhap12_566;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_534:HG4_PB_SVrefine2PBcRDovetail_393:HG4_Ill_SVrefine2DISCOVARDovetail_479:HG2_PB_SVrefine2PBcRplusDovetail_461:HG2_PB_SVrefine2PB10Xhap12_566;NumExactMatchSVs=5;ClusterMaxShiftDist=0.259188;ClusterMaxSizeDiff=0.251451;ClusterMaxEditDist=0.367505;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=278;DistBack=112311;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=568;REFWIDENED=1:96730963-96731530;PctSeqSimilarity=0.9601;PctSizeSimilarity=0.9929;PctRecOverlap=0;SizeDiff=-2;StartDistance=-284;EndDistance=-284;GTMatch=0;TruScore=65;MatchId=228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:94:1/1:3:32:0:17:./.:0:0:0:0:./.:1:0:./.:.:.:.:.:.
chr1	101816361	HG2_Ill_svaba_793	T	TAATATATTATATATAATATATTCTATATATAGAATATATTATATATTATATATTCTATATATAG	20	PASS	ClusterIDs=HG3_PB_pbsv_716:HG4_Ill_svaba_788:HG3_PB_HySA_1030:HG3_Ill_svaba_818:HG3_Ill_250bpfermikitraw_833:HG2_Ill_svaba_793;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_svaba_793:HG3_Ill_250bpfermikitraw_833:HG3_Ill_svaba_818:HG4_Ill_svaba_788;NumExactMatchSVs=4;ClusterMaxShiftDist=0.126984;ClusterMaxSizeDiff=0.126984;ClusterMaxEditDist=0.238095;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=64;DistBack=31164;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=14;REFWIDENED=1:101816360-101816376;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=232.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:./.:2:0:1:0:./.:2:7:1:9:0/1:25:16:./.:.:.:.:.:.
chr1	113316159	HG2_PB_SVrefine2PBcRplusDovetail_516	C	CAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_641:HG4_PB_SVrefine2Falcon1Dovetail_497:HG3_PB_SVrefine2Falcon1Dovetail_455:HG2_PB_pbsv_773:HG2_PB_PB10Xdip_101:HG3_PB_pbsv_789:HG2_PB_HySA_1472:HG4_PB_pbsv_779:HG2_PB_SVrefine2Falcon1plusDovetail_524:HG2_PB_SVrefine2PBcRplusDovetail_516:HG3_PB_SVrefine2PBcRDovetail_447;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_516;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0978261;ClusterMaxSizeDiff=0.0879121;ClusterMaxEditDist=0.340782;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=175;DistBack=23135;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=920;REFWIDENED=1:113316160-113317079;PctSeqSimilarity=0.9826;PctSizeSimilarity=0.9831;PctRecOverlap=0;SizeDiff=-3;StartDistance=-828;EndDistance=-828;GTMatch=0;TruScore=65;MatchId=261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:46:1/1:2:27:3:20:./.:2:1:4:1:0/1:15:4:./.:.:.:.:.:.
chr1	152185729	HG2_PB_SVrefine2Falcon1plusDovetail_585	T	TGAGCCAGACCCATGTTGGCCATAGCTGGAAGACTGCCCTGAACCAGACCCGTGTCGGCCGTGGCTAGAGACTGGCCAGATCCAGCCCATGTCGGCCATAGCAGAAGACTGACTGAGCCAGAGCCACCGGTGGCCATAGCTGGAAGACTGACCTGTGCTAGATCCCTCCTGGTCAAAGGTTGATGACTGTCCTGATGTAGAACCATGCTGTCCTTGGCTACAGAAGTGCCCTGAGCCACTACCATGCTGACTGTAAGCAGAGGAATGTCCTGAGCCAGACTCATGTTGACCAAAGACAGAAGAGTGACCCGAGCGAGACTCATATGGGCCACGGCTGGAAGAACGACCTGAGCCAGACCCATGTTGGCCGTGGCTGGAGGAGTGCCCCAAACCGGACCCATGTCGGCCGCGGCTAGGGGACTGGCCAGATCCAGACCCTTGTCGGCGTGGCCCGAAGACTGACGGGAGCCAGACCCATGCTGACCATAGGGAAGACGAACCTGAGCTAGATCCGTGTCGTTCACCCCTAGATGACTGTCCTGATCTAGAGCCGTGTTGTCCGTAGCCAGAGGAGTGACCTGAGCCAGACCCATGCTGACTGTAACTAGAGGACTGCCCTGAGCTAGACTCGTGGTGACCAAAGCCAGAAGACTCGCCTAAGCCAGACCCATGTTGGCCACTGCTGGAAGACCGACCGGAGCCAGACCCATGTCGGCCATAGCTGGGAGACTGCCTTGACCCAGACCCACGCTGGCCGTGGCCTGGAGACTGGCCAGATCCAGAGCCCTGTCGGCCATAGCCAGAAGACTGACTTGAGCCAGAGCCATGCTGACCGTGGCTGGAAGACTGACCTGAGCTAGCTCCATGTTGGCCACAGCTCGATGACTGTCCTGATGTAGAACCATGTTGCCCATGGGTAGAGGAATGACCTGAGCTAGATCCATGTTGACCGTAGCCAGAGGACTGTCCTGAGCGAGACTCTCGGTGACCTAAGCCAGAAGAGTGACCGGAGCCAGACTCATATGGGCCACGGCTGGAAGACCACCCTGAGCCAGACCCATATGGGCGTAGCTGGAAGACTGCCCAGAACCAGACCCATGTCGGCCACGGCTAGGGCTAGGAGACTGGCCAGATCCAGACCCATGTTGGCCGTGGCCCAAAGACTGACGGGAGCCAGACCCATGCTGACCATAGCTGGAAGATGAACCTGAGCTAGATCCGTGTTGTTCACCCCTAGATGACTGTCCTGACCTAGAGCCGTGTTGTTCGTAGCTGGAGGAGTGACCTGAGCCAGATCCATGCTGAGTGTAACCAGAGGACTGCCATGAGCTAGACTCATGGTGACCAAATCCAGAAGACTGACCTGAGCCAGACCCATGTCGGCCACTGCTGGAAGACCAACCGGAGCCAGACCCATGTTGGCCGTAGCTGGAAGAGTGCCCGGAACCGGACCCATGTCGGCCGCGACTAGGAGACTGGCCAGATCCAGAGCCCTGTTGGCCATAGCTAGAAGACTGACTTGAGCCAGAGCCATGCTGACCGTGGCTGGAAGACTGACCTGTGCTAGATCCCTCCTGGTCAAAGGTTGATGACTGTCCTGATGTAGAACCATGCTGTCCTTGGCTACAGAAGTGCCCTGAGCCACTACCATGCTGACTGTAAGCAGAGGAATGTCCTGAGCCAGACTCATGTTGACCAAAGACAGAAGAGTGACCCGAGCGAGACTCATATGGGCCACGGCTGGAAGAACGACCTGAGCCAGACCCATGTTGGCCGTGGCTGGAGGAGTGCCCCGAACCGGACCCATGTCGGCCGCGGCTAGGGGACTGGCCAGATCCAGACCCTTGTCGGCCATGGCCCGAAGACTGACGGGAGCCAGACCCATGCTGACCGTAGCGGGAAGACGAACCTGAGCTAGATCCGTGTCGTTCACCCCTAGATGACTGTCCTGATCTAGAGCCGTGTTGTCCGTAGCCAGAGGAGTGACCTGAGCCAGACCCATGCTGACTGTAACTAGAGGACTGCCCTGAGCTAGACTCGTGGTGACCAAAGCCAGAAGACTCGCCTAAGCCAGACCCATGTTGGCCACTGCTGGAGGACCGACCGGAGCCAGACCCATGTCGGCCGTAGCTGGGAGACTGCCTTGACCCAGACCCACGCTGGCCGTGGCCTGGAGACTGGCCAGATCCAGAGCCCTGTCGGCCATAGCCAGAAGACTGACTTGAGCCAGAGCCATGCTGACCGTGGCTGGAAGACTGACCTGAGCTAGCTCCATGTTGGCCACAGCTCGATGACTGTCCTGATGTAGAACCATGTTGCCCATGGGTAGAGGAATGACCTGAGCTAGATCCATGTTGACCGTAGCCAGAGGACTGTCCTGAGCGAGACTCTCGGTGACCTAAGCCAGAAGAGTGACCGGAGCCAGACTCATATGGGCCACGGCTGGAAGACCACCCTGAGCCAGACCCATATGGGCTGTAGCTGGAAGACTGCCCAGAACCAGACCCATGTCGGCCACGGCTAGGGCTAGGAGACTGGCCAGATCCAGACCCATGTTGGCCGTGGCCCAAAGACTGACGGGAGCCAGACCCATGCTGACCATAGCTGGAAGATGAACCTGAGCTAGATCCGTGTCGTTCACCCTAGATGACTGTCCTGACCTAGAGCCGTGTTGTTCGTAGCTGGAGGAGTGACCTGAGCCAGATCCATGCTGAGTGTAACCAGAGGACTGCCATGAGCTAGACTCGTGGTGACCAAATCCAGAAGACTGACCTGAGCCAGACCCATGTCGGCCACTGCTGGAAGACCAACCGGAGCCAGACCCATGTTGGCCGTAGCTGGAAGAGTGCCCGGAACCGGACCCATGTCGGCCGCGACTAGGAGACTGGCCAGATCCAGAGCCCTGTTGGCCATAGCTAGAAGACTGACTTGAGCCAGAGCCATGCTGACCGTGGCTGGAAGACTGACCTGTGCTAGATCCCTCCTGGTCAAAGGTTGATGACTGTCCTGATGTAGAACCATGCTGTCCTTGGCTACAGAAGTGCCCTGAGCCACTACCATGCTGACTGTAAGCAGAGGAATGTCCTGAGCCAGACTCATGTTGACCAAAGACAGAAGAGTGACCCGAGCGAGACTCATATGGGCCACGGCTGGAAGAACGACCTGAGCCAGACCCATGTTGGCCGTGGCTGGAGGAGTGCCCCAAACCGGACCCATGTCGGCCGCGGCTAGGGGACTGGCCAGATCCAGACCCTTGTCGGCCGTGGCCCGAAGACTGACGGGAGCCAGACCCATGCTGACCATAGCGGGAAGACGAACCTGAGCTAGATCCGTGTCGTTCACCCCTAGATGACTGTCCTGATCTAGAGCCGTGTTGTCCGTAGCCAGAGGAGTGACCTGAGCCAGACCCATGCTGACTGTAACTAGAGGACTGCCCTGGCTAGACTCGTGGTGACCAAAGCCAGAAGACTCGCCTAAGCCAGACCCATGTTGGCCACTGCTGGAAGACCGACCGGAGCCAGACCCATGTCGGCCGTAGCTGGGAGACTGCCTTGACCAGACCCACGCTGGCCGTGGCCTGGAGACTGGCCAGATCCAGAGCCCTGTCGGCCATAGCCAGAAGACTGACTTGAGCCAGAGCCATGCTGACCGTGGCTGGAAGACTGACCTGAGCTAGCTCCATGTTGGCCACAGCTCGATGACTGTCCTGATGTAGAACCATGTTGCCCATGGTAGAGGAATGACCTGAGCTAGATCCATGTTGACCGTAGCCAGAGGACTGTCCTGAGCGAGACTCTCGGTGACCTAAGCCAGAAGAGTGACCGGAGCCAGACTCATATGGGCCACGGCTGGAAGACCACCCTGAGCCAGACCCATATGGGCTGTAGCTGGAAGACTGCCCAGAACCAGACCCATGTCGGCCACGGCTAGGGCTAGGAGACTGGCCAGATCCAGACCCATGTTGGCCGTGGCCCAAAGACTGACGGGAGCCAGACCCATGCTGACCATAGCTGGAAGATGAACCTGAGCTAGATCCGTGTTGTTCACCCTAGATGACTGTCCTGACCTAGAGCCGTGTTGTTCGTAGCTGGAGGAGTGACCTGAGCCAGATCCATGCTGAGTGTAACCAGAGGACTGCCATGAGCTAGACTCATGGTGACCAAATCCAGAAGACTGACCTGAGCCAGACCCATGTCGGCCACTGCTGGAAGACCAACCG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_703:HG2_PB_SVrefine2PBcRplusDovetail_586:HG2_PB_SVrefine2Falcon1plusDovetail_585:HG2_PB_SVrefine2Falcon2Bionano_145;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_585;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00284024;ClusterMaxSizeDiff=0.00284024;ClusterMaxEditDist=0.0066335;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=4218;DistBack=56627;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=7814;REFWIDENED=1:152185730-152193543;PctSeqSimilarity=0.8721;PctSizeSimilarity=0.7477;PctRecOverlap=0.7479;SizeDiff=-1423;StartDistance=-693;EndDistance=-693;GTMatch=0;TruScore=78;MatchId=271.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:31:./.:6:13:20:13:./.:31:3:9:0:0/0:22:1:0/1:12:18:.:.:.
chr1	155924029	HG2_PB_SVrefine2PB10Xhap12_716	T	TCTGGGATTAAAGGCGTGAGCCACTGCATCCAGCCAATCTACTTCTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAAGCTCCGCCTCCCAGGTTCATGCCATTCTCCTACCTCACTCTCCTGAGTAGCTGGGACTACAGGCACCCGCCACCACCCCGGCTAATTTTTTTTTTGTATTTTTTAGTAGAGATGGGGTTTCACTGTGTTAGCCAGGATGGTCTCAATCTCCTGACTTCGTGATCCGCCCACCTCGGCCTCCCAAAGTG	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_546:HG3_PB_HySA_1295:HG3_PB_assemblyticsfalcon_1205:HG4_PB_assemblyticsfalcon_1205:HG2_PB_pbsv_869:HG2_PB_PB10Xdip_639:HG2_PB_HySA_1623:HG2_PB_SVrefine2Falcon1plusDovetail_596:HG3_PB_HySA_1294:HG4_PB_pbsv_876:HG3_PB_pbsv_883:HG2_PB_SVrefine2Falcon2Bionano_156:HG3_PB_SVrefine2Falcon1Dovetail_512:HG4_PB_SVrefine2Falcon1Dovetail_549:HG2_PB_SVrefine2PB10Xhap12_716:HG2_PB_SVrefine2PBcRplusDovetail_597:HG3_PB_SVrefine2PBcRDovetail_514;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_716:HG4_PB_SVrefine2Falcon1Dovetail_549;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0796325;ClusterMaxSizeDiff=0.0643185;ClusterMaxEditDist=0.294574;PBcalls=16;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=315;DistBack=-314;DistForward=365;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=366;REFWIDENED=1:155924030-155924395;PctSeqSimilarity=0.9619;PctSizeSimilarity=0.9844;PctRecOverlap=0;SizeDiff=-5;StartDistance=-351;EndDistance=-351;GTMatch=0;TruScore=64;MatchId=278.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:31:1/1:3:14:2:12:./.:0:4:5:2:./.:5:2:0/1:1:8:.:.:.
chr1	198810944	HG2_PB_SVrefine2Falcon1plusDovetail_739	T	TTAATATATTCTTATTTATATAAAAATATATATTATATTCTTATTTATATAAAAATATATATTATATTCTTATTTATATAAAAATATATATTATATTCTTATTTATATAAAATATATATTATATTCTTATTTATATAAAAATA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_739:HG2_PB_pbsv_1069:HG2_PB_SVrefine2Falcon2Bionano_270:HG2_PB_SVrefine2PBcRplusDovetail_712:HG3_PB_SVrefine2Falcon1Dovetail_659;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_739;NumExactMatchSVs=1;ClusterMaxShiftDist=0.122744;ClusterMaxSizeDiff=0.108303;ClusterMaxEditDist=0.187726;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=142;DistBack=6622;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=310;REFWIDENED=1:198810945-198811254;PctSeqSimilarity=0.9941;PctSizeSimilarity=0.9861;PctRecOverlap=0;SizeDiff=-2;StartDistance=-196;EndDistance=-196;GTMatch=0;TruScore=66;MatchId=349.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:40:0|1:34:3:2:31:0/0:6:0:5:0:0/0:44:1:./.:.:.:.:.:.
chr1	201224978	HG3_PB_SVrefine2Falcon1Dovetail_664	A	AGAGTGATGGAGTGAGATGGAATGATGGAGTGTTAGAGTGAGTTGGAGTGATCGAGGAGTGATGGAGTGAGATGGAGTGATGGAGTGAGATGGAGTGATGGAGTGATGGAGTCAGATAGAGTGATGGAGTAATGGAGTAAGATGGAGTGTGGAGTGATGGAGTGAGATGGAGTGAGATGGAATGATGGAGTGAGATAGAGTGATGGAGTGATGGAGTGCTGGAGTGAGATGGAGCGATGGAGTGATGGACTGAGATGGAGTGATGGACTGAGATGGAGTGATGGAGTGATGCAGTGAGATGGAGTGATGGAGTGACGGAGTGAGATGGAGTGATGGAGTGAGAGAGTGAGATGGAGTGATGGAGTGAGATGGAGTGATGGAGCGAGATGGAGTGATGGAGTGAGATAGAGTGAGGGAGTGATGAAGTGAGATG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_878:HG4_PB_SVrefine2Falcon1Dovetail_692:HG3_PB_SVrefine2PBcRDovetail_614:HG3_PB_SVrefine2Falcon1Dovetail_664:HG2_PB_SVrefine2PBcRplusDovetail_720:HG2_PB_SVrefine2PB10Xhap12_879:HG2_PB_SVrefine2Falcon2Bionano_279:HG2_PB_SVrefine2Falcon1plusDovetail_745;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_279:HG2_PB_SVrefine2PB10Xhap12_879:HG2_PB_SVrefine2PBcRplusDovetail_720:HG3_PB_SVrefine2Falcon1Dovetail_664:HG3_PB_SVrefine2PBcRDovetail_614;NumExactMatchSVs=5;ClusterMaxShiftDist=0.102957;ClusterMaxSizeDiff=0.102957;ClusterMaxEditDist=0.10687;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=432;DistBack=29521;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=619;REFWIDENED=1:201224979-201225597;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=352.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:./.:8:13:10:6:1/1:5:165:4:135:./.:0:1:./.:1:5:.:.:.
chr1	202173349	HG2_PB_SVrefine2PB10Xhap12_883	A	ACACACCTCCACACACACACACACCTCCACACACAACCTCCAAACACACACACACCTCCAAACACACACACCTGCAAACACACACACACCCAACACACACCTCCTCCTAACACACACACCTCCACACACACACACCTCCAAACACACACACCTCCACACACACACCTCCACACACACACCTCCAAACACACACCACACACACACCTCCAAACACACACACACCTCCACACACACACCTCCACACACACACCTCCAAACACACCTCCACACACACACCTCCAAACACACACACACACCTCCAAACACACACACCTCCTTCAAACACACACACACCTCCAAACACAAACACACCTAACACACACCTCCTTCAAACACACACACCTCCAAACACACACCTCCTTCAAACACACACACCTCCAAACACACACACACCTCCAAACACACACACGCCTCCAAACACACACACACCCCAAACACACACACACACCTAACACACACCTCCTTCAAACACACACCTCCAAACACACACACACACCCCTCCTTCAAACACACACACACCTCCAAACACACACACACCCCTAACACACACCTCCTCCAAACACAAACCTCCAAACACACACACACCTCCAAACACACACACACCTAACACACACCTCCTCCAAACACACACACACTTCCAAACACACACACACCTCCAAACACACATACATCTCCAAACACACACACACCTAACACACGCACCTAACACACACTTCCTTCAAACACACACACCTCCAAAGACACACACACACCTAACACACACCTCCTTCAAACACACACACCTAACACACACCTCCTTCAAACACACACACACACCTCCAAACACACACACACCTAACACACACCTCCTTCAAACACACACACACCTCCAAACACACACACCTAACACACACCTCCTTCAAACACACACACACCTCTCCAAACACACACACACACCTAACACACCCCCCTTCAAACACACACACCTCTCCAAAACACACACACACCTAACACACACCTCCTTCAAACACACACACACCTCCAAACACAAACACACCTAACACACCCCTCCTTCAAACACACACACCTCAAAACACACACACCTCAAAACACACACACATACCTAACACACACCTCCTTCAAACACACACACCTCCAAAAACACACACACCTAACACACACCTCTTTCAAACACACACACACCTCCACACACACCTAACACACACTTCCTTCAAACACACACCCTCGAAACACATGTCCTTCAAACACACACACCCTCAAACACACACCTCCTTCAAACACACACACACCCTCCAAACACACACACCACCACACCTCCTTCAAACACACACCACCTCCAAACACACACACACCTAACACACACCTCCTCCAAACACACATACACACCTCCAAACACACACACCTAACACACCTCCTTCAAACACACACACACCTCCAAACACACACACCTAACACACACCTCCTCAAACACAACACACACACCTCCAAACACACACACACCTAACACACACCTCCTCCACACACACACACATACCTCCAAACAAACACACACCTAACACACCTCCTTCAAACACACACACACCTCCACACACACACACCTAACACGCACCTCGTTCAAACGCACACACCCCCTTCAAACACACACACCTCCTTCAAACACACACACACCTCCAAACACACACACACCTAACACACACCTTCAAGCACACACTCCTCCAAACACACACACACCTAACACACACCTCCTCCAAACACACACACACCTCCAAACACACACACACCTAACACACACCTCCTTCAAACACACACACCTAACACACCCGTCCTTCAAACACACACACACCACACACACATCTAACACACACCTCCTTCAGACACACACCTCCAAACACACACACACCTTACACACACCTTCAAACACACACACACACCTAACACACACCTCCTTCAAACACACACACCTCCAAACACACACATCTAACACACACCTCCTTCAAACACACACACACACCTCCACACACACACACACCTAACACACACCTCCTTCAAACACACACACCTCCAAACACACACACACCTAACACAGCTTCTTCAAACACACACACACCTCCAAACACACACACACCTAACACACACCTCCTTCAAACACACAAACCTCCAGCACACACACCTAACACACACCTCCTTCAAACACACACCTCCACACACACACACACCTAACACACACCTCCTTCAAACACACACACCTCCAAACACACACACACCTAACACACACACCTTCAAACACACACACACCTAACACACACCTCCTTCAAACACACACCCTCCAAACACACACACCTCCTTCAAACACACACACCTCCAAACACACACACACCTAACAGACACCTCCTCCAAGCACACACACACCTCCAAACACACACACACCCAACACACGCCTCCTTCAAACACACACATCTCCAAACACACACACAGCTAACACACACCTCCTTCAAACACACACACACCCCTCCAAACACACACACACCTAACACACACCTCCTTCAAACACACACACCCTCCAAACACACACACCTCCAAAGACACACACACACCTAACACACACCTCCAAGCACACACACACCTCCAAACACACACACACCTAACACACACCTCCTCCAAACACACACACACCTCCACACACATACCTAACACAAACCTCCTTCAAACGCACACACCCCCTTCAAACACACACACCTCCTTCAAACACACACACACCTCCAAACACACACACACCTAGCACACACTCCTCCACACACACACACACCTAACACACACCTCCTTCAAACACACACACACCTCCAAACACACATACACCTCCAAACACACACACACACCTCCAAACACACATACACCTCCAAACACACACACCTAACACACACCTCCTTCAAACACACACACCTCCAAACACACACACACCTAACACACACACCCCTCCTTCAAACACACACACACCTCCAAACACACACACACACCTAACACACACCTCCTCCAAACACACACACACCTCCAAACACACACACACCTAACACACACCTCCTCCAAACACACACACCTCCAAACACACACACCTCCAAACACACACACACCTAACACACACACCTAACACACACCTCCTTCAAACACACACACACCTCCAAAGACACACACACACCTAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_747:HG2_PB_SVrefine2PB10Xhap12_883:HG4_PB_SVrefine2Falcon1Dovetail_695:HG3_PB_SVrefine2Falcon1Dovetail_666:HG2_PB_SVrefine2PBcRplusDovetail_722:HG2_PB_SVrefine2Falcon2Bionano_281;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_883;NumExactMatchSVs=1;ClusterMaxShiftDist=0.2153;ClusterMaxSizeDiff=0.2153;ClusterMaxEditDist=0.234126;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=3235;DistBack=-1330;DistForward=471;DistMin=-1330;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1619;REFWIDENED=1:202173350-202174968;PctSeqSimilarity=0.9303;PctSizeSimilarity=0.8816;PctRecOverlap=0.5719;SizeDiff=383;StartDistance=-1194;EndDistance=-1194;GTMatch=1;TruScore=79;MatchId=354.0.3	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:74:1/1:2:17:3:22:./.:33:88:29:87:./.:0:0:1/1:9:295:.:3331:.
chr1	215042534	HG2_PB_SVrefine2Falcon2Bionano_316	C	CCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACACCCCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_767:HG2_PB_SVrefine2PB10Xhap12_932:HG3_PB_pbsv_1148:HG4_PB_SVrefine2PBcRDovetail_632:HG2_PB_SVrefine2PB10Xhap12_931:HG2_PB_SVrefine2Falcon2Bionano_316:HG2_PB_SVrefine2Falcon1plusDovetail_789;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_316:HG2_PB_SVrefine2PB10Xhap12_931;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0703518;ClusterMaxSizeDiff=0.0703518;ClusterMaxEditDist=0.221106;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=101;DistBack=9572;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=337;REFWIDENED=1:215042535-215042871;PctSeqSimilarity=0.9848;PctSizeSimilarity=0.9703;PctRecOverlap=0;SizeDiff=3;StartDistance=-162;EndDistance=-162;GTMatch=0;TruScore=65;MatchId=372.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:36:./.:0:0:2:36:./.:0:0:0:1:0/0:10:0:./.:.:.:.:.:.
chr1	245266152	HG2_PB_SVrefine2PB10Xhap12_1110	G	GAGGCCCAGCATTGTTTATTTCAGTCCTCCACCCTGTGAGGCTGACGAGGATCAGAGGTGGTCCTCTATGGTCAGGAGGGGGGACCAGAGAGGCCAAGCATTGTTTATTTCAGTCCTCCACCCTGTGAGGCTGACGAGGATGAGAGGTGGTCCTCTGTGGTCAGGAGGGGGGACCAGAGAGGCCAAGCATTGTTTATTTCAGTCCTCCACCCTGTGAGGCTGAGGAGGATGAGAGGTGGTCCTCTATGGTCAGGAGGGGGACCAGAGAGGCCAAGCATTGTTTATTTCAGTCCTCCACCCTGTGAGGCTGACGAGGATGAGAGGTGGTCCTCTATGGTCAGGAGGGAGACCAGAGAGGCCAAGCATTGTTTATTTCAGTCCTCCACCCTGTGAGGCTGACGAGGATCAGAGGTGGTCCTCTATGGTCAGGAGGGAGACCAGAGAGGCCAAGCATTGTTTATTTCAGTCCTCCACCCTGTGAGGCTGAGGAGGATCAGAGGTGGTCCTCTATGGTCAGGAGGGGGGACCAGAGAGGCCAAGCATTGTTTATTTCAGTCCTCCACCCTGTGAGGCTGAGGAGGATCAGAGGTGGTCCTCTATGGTCAGGAGGGAGACCAGAGAGGCCAAGCATTGTTTATTTCAGTCCTCCACCCTGTGAGGCTGAGGAGGATCAGAGGTGGTCCTCTATGGTCAGGAGGGGGGACCAGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_750:HG3_PB_pbsv_1343:HG2_PB_pbsv_1362:HG3_PB_SVrefine2Falcon1Dovetail_852:HG2_PB_HySA_2660:HG2_PB_PB10Xdip_1394:HG3_PB_HySA_2120:HG2_PB_assemblyticsPBcR_2054:HG2_PB_SVrefine2PBcRplusDovetail_901:HG4_PB_HySA_2080:HG3_PB_SVrefine2PBcRDovetail_746:HG2_PB_SVrefine2PB10Xhap12_1110:HG2_PB_SVrefine2Falcon2Bionano_439:HG2_PB_SVrefine2Falcon1plusDovetail_931:HG4_PB_SVrefine2Falcon1Dovetail_869:HG2_PB_SVrefine2PB10Xhap12_1109;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1110;NumExactMatchSVs=1;ClusterMaxShiftDist=0.315789;ClusterMaxSizeDiff=0.314404;ClusterMaxEditDist=0.337987;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=707;DistBack=-706;DistForward=5;DistMin=-706;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=841;REFWIDENED=1:245266153-245266993;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=435.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:84:1/1:1:20:1:25:./.:3:0:3:3:0/1:4:18:0/1:4:18:.:.:.
chr2	910789	HG3_PB_assemblyticsfalcon_12961	G	GCCGGTGCTGACCGTGATCCAGAACCCACAGGCAGAAGATGGAAGGCCCCGTCCGTGCTCTCCCAATGACTGGGCACCCAGGGATGC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_821:HG4_PB_assemblyticsfalcon_12735:HG2_PB_assemblyticsPBcR_12508:HG3_PB_HySA_2254:HG3_PB_pbsv_1487:HG3_PB_assemblyticsfalcon_12961:HG2_PB_PB10Xdip_17686:HG4_PB_pbsv_1505:HG2_PB_pbsv_1495;NumClusterSVs=9;ExactMatchIDs=HG3_PB_assemblyticsfalcon_12961;NumExactMatchSVs=1;ClusterMaxShiftDist=0.150289;ClusterMaxSizeDiff=0.150289;ClusterMaxEditDist=0.377778;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=86;DistBack=93;DistForward=57;DistMin=57;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=691;REFWIDENED=2:910351-911041;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2692.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:30:./.:11:22:11:3:./.:4:0:4:0:0/0:20:0:./.:.:.:.:.:.
chr2	3452349	HG2_PB_SVrefine2Falcon1plusDovetail_5919	C	CAGGGCGTGGAGAGCAGCCGGTTACTCGAGGGTAGGGCGTGGAGAGCAGCCGGTTACGCGAGGGTAGGGCGTGGAGAGCAGCCGGTTACGCGAGGGTAGGGCGTGGAGAGCAGCCGGTTACGCGAGGGT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1002:HG2_PB_PB10Xdip_17376:HG4_PB_pbsv_1603:HG3_PB_pbsv_1596:HG4_PB_SVrefine2Falcon1Dovetail_1010:HG2_PB_SVrefine2PB10Xhap12_1273:HG2_PB_SVrefine2Falcon1plusDovetail_5919;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5919:HG2_PB_SVrefine2PB10Xhap12_1273;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.272727;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=128;DistBack=6457;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=187;REFWIDENED=2:3452350-3452536;PctSeqSimilarity=0.9909;PctSizeSimilarity=0.9922;PctRecOverlap=0;SizeDiff=1;StartDistance=-147;EndDistance=-147;GTMatch=0;TruScore=66;MatchId=2709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:29:1|0:1:28:20:0:./.:0:3:9:1:0/1:8:2:./.:.:.:.:.:.
chr2	11042666	HG2_PB_SVrefine2Falcon2Bionano_594	C	CCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCAACCTCCCTCCCGGACGGGGGGGCTGGCCGGGCGGGGGGCTGACCCCCCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_594:HG3_PB_assemblyticsfalcon_13176:HG3_PB_SVrefine2Falcon1Dovetail_1043:HG2_PB_SVrefine2Falcon1plusDovetail_5969:HG2_PB_SVrefine2PBcRplusDovetail_5508:HG2_PB_SVrefine2PB10Xhap12_1333;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_594:HG2_PB_SVrefine2PBcRplusDovetail_5508:HG2_PB_SVrefine2PB10Xhap12_1333;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.184615;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=99;DistBack=9976;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=63;REFWIDENED=2:11042665-11042730;PctSeqSimilarity=0.9841;PctSizeSimilarity=0.9899;PctRecOverlap=0;SizeDiff=1;StartDistance=-278;EndDistance=-278;GTMatch=0;TruScore=65;MatchId=2736.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:56:1/1:0:19:4:26:./.:0:0:0:1:0/0:24:0:./.:.:.:.:.:.
chr2	30053974	HG4_PB_SVrefine2PBcRDovetail_957	G	GAGGAAGAGGAAGAAGGAAGAAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGGAAGAAGAAGAGAGGAAGAGAAAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGGAAGAAGAAGGAAGAAGAAAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAAGAAGAAGAAGAAGAAGAGAAGAGAAGAAGAAGAAGAGAAGAAGAAGAAAAAGAAGAAAGAAAAGAAAGAAAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAGAAGAAGAAGAGAAGAGAAGAGAAGAAGAGAGAAGAAGAAGAAGAAGAGAGAAAGAAGAGAAGAAGAAGAAGAAAAGAAAGAAGAAGTAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAAGAAGAAGGAAAGAAGAAGAAGGAAGGAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAGAAGAAGAAGAAGGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAAAGAAGAAGAGAAGAAGGAAGAAGAAGAGAAGAAGGAAGAAAAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAAAAAAAAGAAGAAGAAAAAAAAAAAAAAGAAGAAGAAGAAGGAAGAAAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAAAGAAGAAGAAGAAGA	10	PASS	ClusterIDs=HG2_PB_pbsv_1792:HG2_PB_SVrefine2PB10Xhap12_1408:HG4_PB_SVrefine2PBcRDovetail_957:HG4_PB_pbsv_1788;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_957;NumExactMatchSVs=1;ClusterMaxShiftDist=0.190164;ClusterMaxSizeDiff=0.190164;ClusterMaxEditDist=0.237646;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=827;DistBack=8;DistForward=12;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=14;REFWIDENED=2:30053975-30053988;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2766.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:0|1:29:3:1:19:./.:45:0:4:0:./.:5:0:0/1:15:9:.:1065:.
chr2	30316428	HG3_Ill_GATKHC_2824	A	AGCAGGCCAGGTCTTTTTTTGGGAGGGGGGTGGGGAGGTGGGGAGACAGGGTCTTG	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_17339:HG4_Ill_GATKHC_2733:HG4_Ill_GATKHCSBGrefine_1172:HG3_Ill_GATKHC_2824:HG2_Ill_GATKHC_2745:HG2_PB_HySA_3307:HG4_PB_HySA_2632:HG2_PB_pbsv_1794:HG4_PB_assemblyticsfalcon_13120:HG3_PB_HySA_2664:HG3_PB_pbsv_1780:HG4_Ill_150bpfermikitraw_2166:HG2_PB_PB10Xdip_17340;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHC_2745:HG3_Ill_GATKHC_2824:HG4_Ill_GATKHCSBGrefine_1172:HG4_Ill_GATKHC_2733;NumExactMatchSVs=4;ClusterMaxShiftDist=0.121739;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.243478;PBcalls=8;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=55;DistBack=0;DistForward=17762;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=2:30316427-30316429;PctSeqSimilarity=0.9834;PctSizeSimilarity=0.9483;PctRecOverlap=0;SizeDiff=-3;StartDistance=63;EndDistance=63;GTMatch=0;TruScore=64;MatchId=2768.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:37:0:15:./.:10:6:9:16:0/1:9:5:./.:.:.:.:.:.
chr2	45814040	HG2_Ill_SVrefine2DISCOVARplusDovetail_6522	G	GTATTTTAAATATTTAATTATTTTAAATTATAAATATTAAAATATTTAAAATTATTTTAAATTATAAATATTAAAATATTTAAAAT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6522:HG4_PB_SVrefine2PBcRDovetail_995:HG2_PB_SVrefine2PB10Xhap12_1462:HG2_PB_SVrefine2Falcon1plusDovetail_6078;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6522:HG4_PB_SVrefine2PBcRDovetail_995:HG2_PB_SVrefine2PB10Xhap12_1462:HG2_PB_SVrefine2Falcon1plusDovetail_6078;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=85;DistBack=41617;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=350;REFWIDENED=2:45814041-45814390;PctSeqSimilarity=0.9624;PctSizeSimilarity=0.85;PctRecOverlap=0;SizeDiff=-15;StartDistance=-186;EndDistance=-186;GTMatch=0;TruScore=60;MatchId=2793.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:41:1|0:4:32:27:5:./.:2:1:1:0:0/0:46:0:./.:.:.:.:.:.
chr2	66989961	HG2_PB_SVrefine2PB10Xhap12_1519	A	ATATATATATATGCGCGTATATATGTGTATATATATACGTGCGTATATGTGTATATATATACGCGCATATATATGTGTGTATATATATACGCATATGTGTATATATATACGCGCGTATATGTGTGTATATATATACGCGCGTATATGTGTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6616:HG4_PB_HySA_2891:HG2_PB_pbsv_1961:HG3_PB_HySA_2936:HG4_PB_pbsv_1967:HG3_PB_pbsv_1946:HG4_Ill_SVrefine2DISCOVARDovetail_1407:HG3_PB_SVrefine2Falcon1Dovetail_1214:HG3_PB_SVrefine2Falcon1Dovetail_1213:HG3_Ill_SVrefine2DISCOVARDovetail_1381:HG2_PB_SVrefine2PBcRplusDovetail_5663:HG2_PB_SVrefine2PB10Xhap12_1519:HG2_PB_SVrefine2Falcon2Bionano_748:HG4_PB_SVrefine2PBcRDovetail_1043:HG2_PB_SVrefine2Falcon1plusDovetail_6129;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_748:HG2_PB_SVrefine2PB10Xhap12_1519:HG2_PB_SVrefine2PBcRplusDovetail_5663:HG3_Ill_SVrefine2DISCOVARDovetail_1381:HG3_PB_SVrefine2Falcon1Dovetail_1213:HG4_Ill_SVrefine2DISCOVARDovetail_1407;NumExactMatchSVs=6;ClusterMaxShiftDist=0.251748;ClusterMaxSizeDiff=0.251748;ClusterMaxEditDist=0.388693;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=150;DistBack=48223;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=238;REFWIDENED=2:66989962-66990199;PctSeqSimilarity=0.9653;PctSizeSimilarity=0.9868;PctRecOverlap=0;SizeDiff=-2;StartDistance=-194;EndDistance=-194;GTMatch=0;TruScore=65;MatchId=2831.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:2:29:2:21:./.:1:9:2:3:0/1:3:17:./.:.:.:.:.:.
chr2	71844713	HG3_PB_SVrefine2Falcon1Dovetail_1227	T	TGTGTGTGTGGTAGAGGTGGTGTGTGTGTATGTGGGGTAGAGGTGATGTGTGTGGCAGAGGTGGTGTGTGTGTGGCAGAGGTGGGGTGTGTGTGTGGTAGAGGTGGGGTGTGTGCGTGTGTGGTAGAGGTGGGGTGTGTGTGTGGTAGAGGTGGTGTGTGTGTATGTGGGGTAGAGGTGGTGTGTGTGGTAGAGGTGGTGTGTGTGTGGTAGAGGTGGGGTATATGTGTGTGTGTGGTAGAGGTGGGGTATAAGTGTGTGTGGTAGAGATGGGGTGTTGTGTGTGTAGAGGTGGGGTGTGTGTGTGGTAGAGTGGGGTGTGTGGTAGAGGTGGTGTGGTGTGGTAGAGGTGGTGTGTGTGTGTGTGGTAGAGGGTTGTGTGTTTGGTAGAGGTGTGTGTGTGGTAGAGGTGGGGTATATGTGTGTGTGGTAGAGATGGGGTGTGTGTGTGGTAGAGGTGTGTGTGGTAGAGGTGTGGTGTGGTAGAGGTGTGTGTGTGTAGAGGTGGGTGTGTGTTTGGTAGAGGTGTTTGTGTGGTAGAGGTGGGTATATGTGTGTGTGGTAGAGATGGGTGTGTGTGTGTGGTAGAGATGGTGTGTGTGTGTGTGTGGTAGAGATGGGGTGTGTGTGTGTGGTAGAGATGGGGTGTGTGTGTGGTAGAGGTGGTGTGTGTGTGGTAGAGGTGGCGTGTGTGGTAGAGGTGGTGTGTGTGTGTGTGGTAGAGGTGGGGTATAAGTGTGTGTGGTAAGATGGGGTGTGTGTGTGTGGTAGAGGTGGGGTGTGTGTGTGGTAGAGGTGGCGTGTGTGGTAGAGGTGGTGTGTGTGTGTGTGGTGGTAGAGGTGGGGTATAAGTGTGTGTGGTAGAGATGGGGTGTGTGTGTGTGGTAGAGGTGGGGTGTGTGTGTGGTAGAGGTGGCATGTGTGGTAGAGGTGTGTGTGTGGTAGATGTGTGTGTGGTAGAGGTGGTGTGTGTGTGTGTGGTAGAGATGGGGTGTGTGTGTGGTAGAGGGGTGTGTGTGTGGTAGAGGTGGCATGTGTGGTAGAGGTGGTGTGTGTGTGTGGTGGTAGAGGTGGCATGTGTGGTAGAGGTGGGGTGTGTGTGTGTGTGGTAGAGGGTGTGTGTGGTAGAGGTGTGTGTGTGTGTGGTAGAGGTGTGTGTGGTAGAGGTGGTGTGTGTGTGGTAGAGGTGTGTGTGTGGTAGAGGTGTGTGTGTGGTAGAGGGGTATATGTGTGTGTGGTAGAGGTGGCGTATATGTGTGTGTGGTAGAGGTGGGGTGTGTGTGGTAGAGGTGTGTGTGTGGTAGAGGTGGTATGTGTGTGTAGAGGTGTGTGTGTGGTAGAGGTGGTGTGTGTGTTGGTAGAGGTGTGTGTGTGGTAGAGGTGGAGTGTGTTTGTGTGGGGTAGAGTTGTGTGTGGTAAAGGTGGTGTGTGTGTGTGTAGAGGTGGGGTGTGTGTGGTAGAGGGTGTGTGTGTGTGGTAGAGGTGTGTGTGTGGTAGAGGTGATGTGTGTGTTGGTAGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5676:HG3_PB_SVrefine2Falcon1Dovetail_1227:HG3_PB_SVrefine2PBcRDovetail_1036:HG4_PB_SVrefine2PBcRDovetail_1053:HG2_PB_SVrefine2PB10Xhap12_1537:HG4_PB_SVrefine2Falcon1Dovetail_1179:HG2_PB_SVrefine2Falcon1plusDovetail_6142:HG2_PB_SVrefine2Falcon2Bionano_755;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1227;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0461039;ClusterMaxSizeDiff=0.0330204;ClusterMaxEditDist=0.125607;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1518;DistBack=-1150;DistForward=273;DistMin=-1150;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=503;REFWIDENED=2:71844674-71845176;PctSeqSimilarity=0.9318;PctSizeSimilarity=0.9896;PctRecOverlap=0.4801;SizeDiff=-16;StartDistance=-790;EndDistance=-790;GTMatch=1;TruScore=80;MatchId=2836.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:94:1/1:3:23:2:19:./.:69:252:43:248:./.:2:0:0/1:10:80:.:1589:.
chr2	113490067	HG2_PB_HySA_4047	C	CTCCCAGGTCTCACTGGCCTGTGTCTTTACAGGGGCAGGTTCTCCAGTAAAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6278:HG2_PB_HySA_4047:HG3_PB_HySA_3297:HG2_PB_PB10Xdip_16366:HG4_PB_HySA_3252:HG3_PB_pbsv_2135:HG2_PB_pbsv_2150:HG4_PB_pbsv_2170;NumClusterSVs=8;ExactMatchIDs=HG2_PB_HySA_4047;NumExactMatchSVs=1;ClusterMaxShiftDist=0.28;ClusterMaxSizeDiff=0.28;ClusterMaxEditDist=0.375;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=51;DistBack=73;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=200;REFWIDENED=2:113489894-113490093;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9804;PctRecOverlap=0;SizeDiff=1;StartDistance=174;EndDistance=174;GTMatch=0;TruScore=65;MatchId=2872.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:50:1/1:3:24:2:21:0/0:6:0:5:0:./.:23:2:./.:.:.:.:.:.
chr2	114012671	HG2_Ill_GATKHC_3463	G	GAAGGAAGGAGGGAGAGAGGAATAGAGGGAAGGAGGAAGGAAGGAAGGAAGGAAAGAAAGAAGGAAGAAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_843:HG2_PB_HySA_4053:HG4_Ill_GATKHC_3479:HG4_Ill_GATKHCSBGrefine_1468:HG2_Ill_GATKHC_3463:HG2_PB_HySA_4052:HG4_PB_pbsv_2175;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_3463:HG4_Ill_GATKHCSBGrefine_1468:HG4_Ill_GATKHC_3479;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0675676;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.248366;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=71;DistBack=18787;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=281;REFWIDENED=2:114012622-114012902;PctSeqSimilarity=0.9227;PctSizeSimilarity=0.732;PctRecOverlap=0;SizeDiff=-26;StartDistance=-109;EndDistance=-109;GTMatch=0;TruScore=55;MatchId=2874.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:22:0|1:28:0:3:16:./.:1:32:15:1:0/1:6:9:./.:.:.:.:.:.
chr2	118400990	HG2_PB_SVrefine2Falcon2Bionano_859	A	ATATATATATAAATATATATATAATATTTATATATATAAATATATATATAATATTTATATATATAAATATATATATAAATATATATATAATATTTATATATATAAATATATATATATAAATATATATATAATATT	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_1600:HG3_PB_SVrefine2Falcon1Dovetail_1361:HG4_PB_SVrefine2Falcon1Dovetail_1314:HG3_PB_SVrefine2PBcRDovetail_1126:HG2_PB_pbsv_2187:HG4_PB_pbsv_2214:HG3_PB_pbsv_2174:HG2_PB_SVrefine2Falcon1plusDovetail_6305:HG3_Ill_SVrefine2DISCOVARDovetail_1525:HG2_PB_SVrefine2PBcRplusDovetail_5824:HG2_PB_SVrefine2PB10Xhap12_1686:HG2_PB_SVrefine2Falcon2Bionano_859:HG2_Ill_SVrefine2DISCOVARplusDovetail_6816:HG4_PB_SVrefine2PBcRDovetail_1170;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6816:HG2_PB_SVrefine2Falcon2Bionano_859:HG2_PB_SVrefine2PB10Xhap12_1686:HG2_PB_SVrefine2PBcRplusDovetail_5824:HG3_Ill_SVrefine2DISCOVARDovetail_1525:HG3_PB_SVrefine2PBcRDovetail_1126;NumExactMatchSVs=6;ClusterMaxShiftDist=0.283784;ClusterMaxSizeDiff=0.283784;ClusterMaxEditDist=0.291391;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=134;DistBack=33283;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=210;REFWIDENED=2:118400991-118401200;PctSeqSimilarity=0.9383;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-173;EndDistance=-173;GTMatch=0;TruScore=64;MatchId=2883.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:73:./.:1:4:0:4:./.:0:4:0:1:1/1:0:10:./.:.:.:.:.:.
chr2	118851545	HG2_PB_SVrefine2Falcon1plusDovetail_6306	G	GAGGAGAGTTCTGTAGCTACTGAACCTTGCCAAAAGCAACCAGATGATGATGATGATGATGATGATGATGATGATGATGATGATGGAGAGTTCTGTAGCTACTGAACCTTGCTGAAAGCAACCAGATGATGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGTTCTGTAGCTACTGAACCTTGCTAAAAGCAACCAGATGATGATGATGATGAGGAGGAGGAGGAGGAGAGTTCTGTAGCTACTGAACCTTGCCAAAAGCAACCAGATGATGATGATGATGATGATGATGATGATGATGATGATGAAGGAGAGTTCTGTAGCTACTGAACCTTGCCAAAAGCAACCAGATGATGATGATGATGA	10	PASS	ClusterIDs=HG2_PB_pbsv_2194:HG2_PB_SVrefine2Falcon2Bionano_863:HG2_PB_SVrefine2Falcon1plusDovetail_6306:HG3_PB_SVrefine2PBcRDovetail_1131:HG3_PB_SVrefine2Falcon1Dovetail_1364;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6306:HG2_PB_SVrefine2Falcon2Bionano_863;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0296496;ClusterMaxSizeDiff=0.0269542;ClusterMaxEditDist=0.109626;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=366;DistBack=-356;DistForward=43;DistMin=-356;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=461;REFWIDENED=2:118851546-118852006;PctSeqSimilarity=0.9747;PctSizeSimilarity=0.9683;PctRecOverlap=0;SizeDiff=-12;StartDistance=-398;EndDistance=-398;GTMatch=0;TruScore=64;MatchId=2886.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:46:./.:30:15:3:12:./.:16:18:5:78:./.:0:4:0/1:4:11:.:.:.
chr2	123284243	HG2_PB_SVrefine2PBcRplusDovetail_5843	A	AGTAATCCTACTGCCAGGTATGTTGTCTTGAAAATTCAAATCTGATCATGCCATCCTCAGATGATAACGCTTTACTGATCTCAATAACTTTCTATTGTGTTTAGAATCAAGTCCAAACTTGATAGATATTGCTAGCATGGACCACAAGGCCCTGCATCATTGGATCTCCTGCTTTGTCTCCAGACTCATTTTATGCATTTGTCTCTCTCCATCTCCTTATTCCAGATTTTTCCCTCACAACCTTCAAAAGGAACATTGATTTTTAGTTTCTGGAAATTTTCAGAACCTCACCTGTTACCTGAGCTTTGCATATGCTCTATCCCTCCTCCTTCTATGCCCAGGTAACCCTGACCCTCTCCTCAAAGCTTGAGTCAGTTGTCATTTCTTCAGAGATCCACTCCAGTATCTTCCTAACTAACCTAAGTCTTTTAATTGAAAGGTCTTTCTCATGATACTGTGTACCTCCCTCTATAGTAAATGTTCTGTTGTAATATTTACCTTAACTTGTAAGACTACATCGTTAATGTCTAGGTTAATGTCTAGGCTAATGTCCAGGAGACCATACGCCCCTTGAGGTCAGGGCCGATTTTTAATCAACATTGTTGCCCCTACTATGTGTCCAAGGCATGACGTATAGTAGATTCCCATCTATGTTGAATGATGAAAGGGCTTTTAAATAACTGACAGTCTCACTGTTAGGAAAGAAATGTTTAAGCCTTGATGTTAACCTTCCATATAGTTTCTACTTCTGCAAATGAGATTGTTTTTAAAGCTATAAATCTGTCTTACTGCTTTAATGTCTGAATGGATTTGTGGGCCTGTAAACATTTAACGGAACACACATCTGGAATAATCAACTGGAACCACGAACTTCATATATTTACAAGAACAAGTGAAAGATGACCTTATTTTTATTCAACACCCTATTACAATTGAAGTAAGGAATATAGCAATTCTGACCCAGTTGAATTACTGATAACCATTATGTATAGCTGGAGAGCAGAGGTTAGAAATATATGACCATGTCCTTTGTCTTTGCTCATTCACTTTGCTTAAGAGCAACACCTCATATCGGCCGGGCGTGGCGGCTCACGCCTGTAATCCCAGCACTTCGGGAGGCCGAGGTGGGTGGATCACAAAGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAACTTAGCCGGGCGTGGTAGCGGGCGCCCGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCTGTGAGCCGAGATTGCCCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAGAACAAAAGAACAATACCTCCTATCAATATAATTCTTTTAAATTGTAAGATCACTTTCATTCCAGTTGATCCTCATAAATAACCCTGGTCGAGTTAGGACAGGAAACGTATCTTCATCATTGTGCAAAAGAGTAACCATGGCACAGAAAAGTTAAGTAATTTCAACAGTTCAAAAATCTAAGTAAATAGTAGAGTCAAGATGTAGTCCAGGCTTCCTGTCCCCCTATCTGGGGTTATATGATTACTCATGTACTTGTGGATATTTGTGGTAGGATAAATTTGTGGTTGGCAAAACAGGGACAGGAGAAAGAAGCTGGAGATGAAGTCATCAAAGTCTTGAACTTTATATTAATTTTCACTTACTAAAACAAAACCGTAAAAACAATGTATTTAGTAAAATGACATTGTCATATTCCAATGCAATTAATGTTTATCCCGTAATAAATTTCCATTTAGCAAGCATTCATTGTGTTGGCTTAGCTGATAGTATTATTATGATTATTATGATTATTTACTAAAATTTAATTCCAAGAAACATTTCAAAATTACCTCTGCTGCTGTTCCAATAATTTTCTTATACAATAATTTTACATAGAACATTTGAGAGAAGAATGAGAAAAAATAAAAAGGTTTTTAGTAGTTATGTGTATCTAAGCAAATTGCCCAAGTCCTGTTGCTCTGTAGAAGAGAGATAGCTTCCTAAGGGAGAATTAACTGGGTGACATAGTAGCCTTTTTAAATGTAATTGAAGGATAGTTTGTGATATACACAAATAACGTGAGTTCCAGTGTGGGGAAAAGATAACCAGAAGTAAATCAATGTGAGAGAATTTCAGTTAGGGACCCTCAATGCTAGGGACTGGATCACTGTACCCTCTATACCCTTTTAATTTTCCAATGGAGAACTTGGTCTAACAGAATAGAGCACAAGTTTTGAGTCACAGTGACCCGAATTTGATTCCTGGTGCTGCTAGTTATGGCTGTGTTCAGGCAAATCTCCTGCGGTGTCAGACTCAGGGAGCTCATCTGTAAATGGGACAAAAATGGGGCCAGCATGACTGAAATATGTGGGCGAGGAGCTGAGCACTGTGCCCGGCACATACTAACTACTCCTCATACCACCACCCCACGCTGCGGCAGTGGCCTGGCAACTAGGCTGAGTGAATGAGGTGCCAACTACAGCATCCTCTGTCTTCTGTAATGCCCGTCATCCTGGGCCTCCTCCAAAGCCTGTGCTGAAGGAGGGCCCAGGCCACCACTTTCCCCTCAGTAGGGGACACCCAGGCAGCCAAGTCAGTGCAGTGACTTTTAAGTCCACGTGACTTAAAAGGCAGTAATGTGCAAAATGTTGCCTAAACTCGTTTGTGGTTGTTTTAGGCTTGTCTGTACAGAGATTTATTTCCCCCCTTTGTCCAACCATTTATGTTTTATAACTCACTCATTTCTGCCCAAACAACTCTCTCCCTCAACATGATCTCGGCAGACTTCCACATATGTGAGCTACGTGAAAGCCAGCCAAATATGCTCCCACATTCTGAATATATGTAGGATGAGTGTAGAAGGCATCTCTTTCAAAGAATACTTAGCATTTTCAGGATAATTTTTATACCAAAGAGTTCATATCTCTGAAGAAACATTATCTGTATATAGAATAAATACCATTTCAATGTAAACCAGATGAATAAATTGAGCTACAGATATATTCTACTCATTGACTGAAGTCACCCAAAAGACCTCATACCCCAAGAAAACAATCAAGGAAGGCAAAGGGGGGGTGGAAATAATTTTTATTGTGCCCTTTCCTTGGGCCTGTTTCTTTGTCAGACTCTTCACATATCTTTCTTCATTTTTTTTCAAGTCATATTTGAAATATTTTGATATTGGCAAATACTACTTCTCTTACCACCCCCCCCACATTGATATTTGAACATATCTAAATTTTTCAAATCATATATCTAATGAGTTTGATATTCAGAGTATATAAAAACTCATACAACTCAATAATAAAAAGACAAATAACCTAATTTAAAAATGAGCAAAACTTTTGGATGGATGTTTCTCCTAAGAAGATACACAAATGGCCAACAAACACATGAAAAGATTCTCAGCATCGTCAGTAATTTATCCCATTTAATAAGTACAACAGTGTTACATAGGTTTTAATGTTATTTTCTTACAACCAAGAAAACGATCAAAATAAGAAGGATATTGGTTTAATTCAGATTTAATTTAGTGACTGTCAATATTTTTATTTTATTTTATCATTTAAGAAATGATGAAGTTTTTATTCCAATCCAAAATGACTTTTTAGTTTATCTATGTGTGTGCTTTTAACATCAAAGATTCTCATAGTTAGAGCTGGGTGTGGTGGCTCACACCTGTAATCTCAGCACTTTGGGAGGCCGAGGTAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCGAAACCCCGTCACTACTAAAAATATAAAAAATTAGCCAGGCATGGCGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAGCCTGGGAGGCGGAGGTTGCAGTGAGCCGAAATCGTACCATTGCACTCCAGCCTGGGCGACAGAGTGAGACTCTGTCTTAAAAAAAAAAAAAAGAGAGAGATTTTCATTGTTGAATAAAATGTATATGTTGGAATTCAGCAAATTTGAACAATTCATTTAAAGTTTTAATTCATAGTTCTATTGGATTGCAAGTTACTTAAAAATAATTACATTTCTTCATTAAAATGAACTGTAATCTGTCATCTAATCCAGACTTCTACCCACAGAAATTTCCTCCACACTATTCTTGAAATGTGGCATCCAGGCACTGCTTGATGGCTTCTGGTGACCAGGAGCCTGTCACTAGAAGAGATAACCCAGAGGATATTCTATTAGTTTATTGGCTGGCCTTAGTCCTGTTCTACAGATCTAAACAGATGCAGTGACTTCCTTTTTCCACATATGTTAAAACTGAAAGTGAGAATTCTTGCCCTTATTTTAGTGACGGTATTAGCTGAAAAAGTGACAATGTTCTAACATACCTCACAGCATCACCTGTCTAATTTGAGAACGCTACACAGGAGAGGCCTGGGGCAAGAAGGGAGGAAAACATTTTGAGGTTGAGAGGTCAGGAAAGCAACAAAGAGGAATTCTATGAGCTGAATCTTTATGTCTGTGACTTTTTCTTTTTATTGATTTCAAAAAGATCATTTTATTCCTTTTTGTTTTTTTTTCCACTTTCCTGGTCTTCTTTTCATTATTGTACTGAATTAGAATTAGAATTTCCAATGGGAAACAGCTATTTGCCCACAGTGGAACTGGTGCCTAGGGCAGGAGGGGAGTGGTCTAAGAATACAACCAGTAGGCCTGCCTGGCAAGGAACACGGAGACAATGAGATTCCTGGACTCCTTGTTAACGTTAAGAAAGAACAGCATCTGAAAAAGAGGCCAATTCTCTAAACTGGCAGCAGAAACTATCCTCAGAGAAATTCCTCCCAGTACAGTAAGAATTAAAACTCTAACTGAGAAAACTAGCAAAAGCAACAGTAATCCTCAGGGGGAAGCCAGATCGGAGCCACAAATCAAAGAGCAATATTAGAAAATGCTGCAAAAATGAGAAAGAAACATAGCGGGACAGCAGGAGGGAGCCGGGGGACCGTGCGTTTTCCTTTTTGTTGGACACATAAGCCTGGGGTGTGTTCTTTGAAAACTTCCCAAGAGATCAAAACAAGAAATTACTGCCTGCAGAACAATTGGTTGGGAAGACGAGGAGAGAGCTGAGATGAACAGCAAGGTCTCTTAGAACTGGGTCTGAGCTTTAACCCCTCCCCAGCCTGCATCTGACAGCATTTTCCTCCTCCTGCAGCCGCAGGCTGCCAATGCAGTTGCCGCACGTGCCTGAGGAGGGCGCCCTCCCCTGCTCTGCTAGATGCCGCCCTTGTCCTTGGACAGTCGGCTGGGAGCGGAGAAGTAGTGGCCCTAAACAGTCAGGAGCCCAGCACTGTATACAACAAAGAATGCTTATTTATTTATTTACTTACTTATTTATTTATTTATTTATTGTTTTAAACTTAAAAAATTGTATGTAATGTGTACAAGGTGATTTTTGATATACACATACTTAGTGAAAGTGATTACTGTGATCAAGAATGCTTTTTTCAAATGAACATAAATTGGCATTTTAACCACAATCTTACATCTCTTCCTATTCAACTTCTCCTGACATTCTTACCCACTAATTTAGTGGTGCAAGAGGGGCATTGATATTTTTAGAATCCAACGAAAGGACGGTTAAGTCAGAAGCACAATTAGTTTGGTGTATTTGTAGTTGTTTAGCTGTCGCTTCAGTAGACAGTGTAGGAAAAGCTTCTAGACATGGCCCCGCCACTCACCACACCAGATCAACTGGCATGACAGAAAGACACAGAGACCGAAGTATGTCACAAAATGAAGGGTTCATTGAGTGCCAGAAAAGAAATATGTATGTAGCCAAGGGGAAACAAGGTTTGATACGTGAGGAGCTGGAAGCTAGTCTAGGGAAATTCTTCTAAGTCTCATGGTTCATACAACAAATAAGCTCGATATATTTTTCCCCAGACTTGAAAGCAATCCCCCAAATGTTTGTGGTATTACCAATAACAATTTGTGCAGCTAAAATAAACTTTTTTTATGTGATGAAAAACTAAGAAAAAATAACTTGGATCGACTTGCTATAAGCAACATTGGATTGTTTTTCTGTTCTCTTTATAGATAATTGTGCTACAAAATTGATGCCATACAAATGGACAAAGAATTTGCAGCCAAAAATGTACAAAAAAGGTATGATAGAGATATGTCAGTTTGTTAATTAATCAAAATACTATGTTCTTTTTCTGGATTTTATAATGTTTATGAAATGTTTTGTGTTTTAGTAATTTGTATTGTGTTTGGAATTTTACCATTAACATTCCAACTAATTTTATATTTAGGGATTATGTATTCTTTTTTCTTCAAGAGTGCACTCCAAATTGTTAAGCTTCTGGCTCTACAAATCCTGCATCTGCCTTTGCTTCTTTCATTGCACTTAATATATTGTGTCATCTTTTACTTGATTACACATCTCTGTTGCCTCCCGGGTGTCAAGGATGCAAATCTAATTATTTCTATCTAATATCCCCAGCACCTAACGTAGTAAAAGCTAGCAGTTGTTCAATATATTGTTGTTCACTGAAGTCTAATTGATGGCTATTGCAAAGAAAGTGGAGACTGGTGATGCTATGCCTCAGATAGAAACCCTAAGGCAACATCAAGACCTGAAGTGGTATTTTTCCTCCCCAAAGACCCAGACACTTCTGAGACCCCATTTCGACTTTGCAATATTGAAAGGCAGGAACAGAAGCATATTTGGCAGTCATGAATGGGGAAAAGGCCACCACAGAGCCTCTGCAAACCTGGACATCCGTGTGCCTCCACAGGAAAGAGATGCCCAAGAAAGAAGTTTCCCTGTAGGTAGAGGACTGGGTTGGAGAAGGTGTGGACCCTCCTAGTTGCCAGCTGTTTCGAGCCTTGGGAATCTGGCCCAATGTTTGTGTTTGGGTCATATTTGATGCCTCCCAGAACACCTAAGTGAGGTTTGCACTATGTGTTCAGAGATAATAAGCAGCATCCTTCTCAGCATCACTGGAGGCAGAGTGGGAGAGCTGGAGACTCACAATGTGAATACCTGAACCAGGACAACTTTTAGAGGAGCAGCACTTCCCACTCAGGTGGGAAGATATGAAAGGATATCAGAAACAGCTCCCTCAAGCCATTCCCTGGCTGCCCTCTCCAGTAAGCAGAGAAATCTGTACTTACCAGGTACAATTATAAATGCCAATATAAGCCTGATGCTCATACGTGGCATGTGTGATGTACTAATTAAGTTCCTTCTATATTCTTAGAGTAAGAGACATGGGATAGGCGAAAGATCCCATCTTTCTACTTAGGTAGGACCCCAGTTAAATTTGAATTTCAGATAAACAATTAACAATTTTTAATTGTAAATGTGTCCCTTATATTTCATGGGACATATTCATACTAAAAAAATTATCTAAAATTGAAATTTAACTGGGTGTTCTGTATTTCCTAAGTTTGGCAACCTTACCTAAGAACTAAATCTGCCCTGCTAAGCCATTTTTAAACCTGTGACCAGGGGATCTGGTGGAGATAGGTGATGAAAGACCATCCCAAGGTAACGCCTCCTCTGGAGGGCAAGGATTATGCCCTTAATACTTGTCTCCTTTAATATATATGCATCTTGTATTCTGTGCGAAATGTTATAGTTAAATGGTAACTCTTATGGGAGCAAGTTTGAAATGGGGGAGGGAACAACCACACACAAAAAGATTAACACATGATGTCTCTAATTTACAATCCAGGGACATTTTTCTCTCTAGAACAATGAATCTAAATACCTTAAAATTGCTCTGTGGCAAAATGCCCCTTCCTTAGACATAGCTGTATACTAGTATACGCTATTATAGGTTTGCTCCCAGTTAGATGTTGATTTCCATTGACAAGAATATGTTGATTTTGGTTATAAGAATAGGATGACTGAATATACAAGTATGTATTTTATTATAATTAGCATATTTTAGATACACTCTATCTAGAAAAGTGATGTACTTGAGGGGGTACAGAGTCGAACCTTGGTTCTGTCTCTTACAGAACCCTTGGTGCCTCAGTTTTCTTATATGTAATTTCAGTTGAAAATGGTACTGGTATCAATGAGTTATACGCAAAAATAAAATAACATATTCCATGAAAGTTTTTTATTCAGGGCTTGAAATATATAACCAGGTCCAGCAAATATTAAAGATTATTAGGCATTAAGCCAGGATTGGAGAGGAATGTGAAACATTATATAAAAACAGAAAAGAAGCCTGGCGCGGTGGCTCACACTTGTAATCCCAGCACTTTGGGAGGCTGAAGAGGGGGGATCACTCGAGGACAGGAGTTTGCGATCAGCCTGGCCAACATGGTGAAACCTCATCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCAGGTGCCTGTAATTCCAGCTACTCAGGAGACTGAGGCAAGAGAATCGCTTGAACCTGGGAGGCAGAGGTTTCAGTGAGCCAAGACCACGCCACTGCACTTCAGCCTGGGTGACAGAGCGAGACTCTGTCTCAAGAACAAACAAACAAACAACAAACAAACAAAGAACAGAAAAGGAGCTAGAAAGAGAGAGGAAAGCTTGGGAGAGCATAGAGAAGATGCTCTAACTTGGATGTCAAAGACACAGAACAATGGAGAAGGAAAACCCTGTTAAAAATGGAGGTGGGTGGAGGTACAGCAAATATTGTAGGGTACTGAATAGTAGATGAATAGTAGGCGAGACTATGAGAAAGATCCTGCAGAAAAAAAATAACCAGTTTATAGGAAATTCCAGTAAGGAATGTATTTGGGAACAAATGGTAGAAAAATAGAAAGCCTAAAATCAATAGCTTTACTTCCTCTGAAGGAGGGAGATTTATTTTTTCTTTTTCTTTTTTTTTCCTTTTTTGTTGGAATTAAATGTAATAGCATGTAAAGCATTTAGGCATTTAGCGTAAAATTGGTCACATAGCAAAACTGATCAACAAACACCATTTTACCCCACCCCGATTTCCCTTTAAGAGCACAGATTTGGACCCAGAAACTAGAAGAGAACGTAAACCAACCACACACAAGTAGCATGCTTTAAAGTTATGAATCTACTTCAGGTGAAGTGAACAGAATCAGAATATATATATATATATATATATATATATATATATATATACTCTCCATATGAGGTGGTTGAGTTGAGTATTGGAAATGATTGTGTGGCCCGAAGTAGGCAGAGTGGGACAAAGAGGCCCCAAAGGAAAAGAAAGAGAGAAGCCGGGGCCCAGAACCTCACTCATCTCCTATCTGCAAAGTCAGGCAGCCTCTCCTCCCTTTTCATCCTCATCTGGCAGTGGTCCTTCATAGCCATCCAGCGACAACATAGGGCTCTTGGTTCCATCTCCCTAGAAGCTCATTTTTGAAGGGAGCTCTTTAAGGAATCGTCTTTAATTGCAATGTGCCTTAATGGATTTTACATTTAGTCAGGCATATCCTCTCACCCATAATTCCCTTCCAACGATGGCAGCTCATCCACTTACCAGCATTATGGCAATTTTCCCTTCACTGGAAATCTCCCCTAAGTGTCTACTTAGGAAGCTCTTTGTTTGATGTGGTTGACATGTTAACAGGAATAGCTCTGTGTTCTCTGAGGTAGTAAACACTGAAAGCTGAAGGAAATTTCAGAGAAGCTGGCAGGGGCCTTCCTTATTCCAAGTTACTTTATTGAATTCTAAGTGGAAAAGGATTTGGAGCAATAATTAAAAGTTTCGAACACAAAGTTTTGTACATGTTAGAATGGAAGAGGCTGGAGAAACCGGCTGCTCTAAATACATGCAGTTGGTTAGAACTGAGGAGGAGCGGCTAGCTCACCTGTGAGTCCTCTTTTGTACAGTCTGTAACTAGAAGTGTTCTCACTTCTACATTTGCACTAAGCTGAAGCCCATTCACTAATCTGATTAATGATAAATCACCATCTATTCTTGAGCCAGGGACTTTGGGGGATAAGTAAGGCATAGAAGCTTACAGTCAAAGTGCTGAGGAGATTACAGTCAAACAAAGGAGAGCAATTTTGGACACAAACGAATAGATGATGGAATGTGATCAGGGTCACAGTCAGAAATAATGGAGGACTATTTGGGTTTCTATGAGAGCCAGATCAATTTGAGTTGCTCTGGTTCAGAGCCCTATGCACTGGTGGGAGTGAGGGAAATAAAAATGGATATTTATCTAAGTTTTGCAAGAGTCCTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5843:HG2_PB_SVrefine2Falcon1plusDovetail_6326;NumClusterSVs=2;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5843;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00077587;ClusterMaxSizeDiff=0.000387935;ClusterMaxEditDist=0.00290951;PBcalls=2;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=10312;DistBack=56931;DistForward=1353;DistMin=1353;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=55;REFWIDENED=2:123284242-123284299;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2897.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:./.:13:41:./.:4:20:8:12:./.:5:0:5:28:0/1:23:9:./.:15:209:.:10192:.
chr2	124440204	HG2_PB_pbsv_2236	T	TTTCTCTTCCTCTCCCTCCTCTCTCTCTCTCTCCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCCTCTCTCTCCCTCTTCTCTCTCTCTCTCTCTCTCCTCTCCTCTCTTTCTCTTCTCTCTCTCTGTCTCTCTCTCCTCTTCTCTCTCTCTGCTCCTCTCTCTCTCTCCCCCTCTCTCCGAGGATCCCTCTCTCTGCTCCCCTCTTCTCTCCTCTCTCTTCTCCCCTCTTCTCTCTTCTCCCTCTCTCTCTCCCCTTCTTCTCTCCCCTCTCTCTCTCTCCTCTCTGTCTCTCCTCTCTCTCTCCTCTCTGTCCTCTCTTGTTCTCTCTCTCTCTCTCCTCTCTCCCTCTCTCTCTCTCTCTCCTCTCTCTCTCCTCTCTTCCTCTCTCTTCCCTCTCTCTCTCCTTCTCTCTTCCTCTCTCTCCTCTCTCCCTCTCTCTCGTCTCTCTCTCCTCTCTCTCTCCTCTCTCTCTCTCCCCTGCTCACCCCTCCTCTCCTCTCTCTCTCTCCTGCTCTCTCCTGTCTGTCTCTCTCTCCTCCTCTCTCTTCTCTCCTGTTCTCTCTCTCTCTCCTCTCCTTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTTCTCTCTCCTCTCTCTCTCTCTTCTCCTTCTCTCTCTTCTCTCCTTCTCTCTCTCCTCTCTCTCCTCTCTCCTCGCTCTCCTCTTCCTCTTCCTCTCTCCTCTCTCTCTCTCTCTCTCTCCTCTCTCCTGTCTCTCTCTCTCTCCTCTCTTCTGTCCCTCTTCTCTCTCTCCTCTCTCTCTCCTCTCTCCTCTCTGTCCTCTTCCTCTCTCCTCTCTCTCCTCTCTCTCTCCTCTCTCCCTCCTCCTCTCTCTCTCCTCTCTCTCTCTCCTCCCTCTCTCTCTCTCCTCTCTCTCTCCCTCTCCTCTCTTCTCCCCTCTCTCTCTCTCTCTCTCTCCCCCCTCTCTCTCTCTCTCCCTCTCTCTCCTCTCTCTCTCTCTCTCTCCTGTCTTCTCTCTCTCCTCTCTCCTCTCTCTCCTGTCTCTCTTCTCATCTCCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCCTCTCTCTCTCTTCATCTCTCTCTCTCTCTCTCTCTCCTCTCTCCTCTCTCCTCTCTCCCTCTACTCTCTCTCTCTCCTCTCCCTCTCTCTCCTGTTCTCTCTCCTCTCTCTCTCGTCTCTCTCTCTCTCTCCCTCCTCTCCTCTCTCCCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCCTCTCCTCTCTTCTCTCTCTCTCCTCTCCTCTCTCCTCCCTCCTCTCTCCTCTCTCATCCTGTCTCTCTCTCTCTCTCTCTCCTCTCCTGCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6330:HG2_PB_HySA_4207:HG2_PB_PB10Xdip_16420:HG2_PB_pbsv_2236:HG3_PB_pbsv_2218:HG2_PB_assemblyticsfalcon_13983:HG4_PB_SVrefine2Falcon1Dovetail_1342:HG3_PB_SVrefine2Falcon1Dovetail_1389:HG2_PB_SVrefine2PB10Xhap12_1710;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_2236;NumExactMatchSVs=1;ClusterMaxShiftDist=0.210294;ClusterMaxSizeDiff=0.210294;ClusterMaxEditDist=0.219118;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1424;DistBack=18310;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=98;REFWIDENED=2:124440190-124440287;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2899.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:42:1/1:2:18:0:9:./.:6:1:4:2:./.:6:1:0/1:30:101:.:1242:.
chr2	143348481	HG4_PB_HySA_3539	T	TTTATAAGTAGATATAAAAATCTACCTCATATTTATAGTAGATATAAAATATCTACCATATA	10	PASS	ClusterIDs=HG2_PB_pbsv_2332:HG2_PB_PB10Xdip_16559:HG4_PB_HySA_3539:HG4_PB_HySA_3538:HG2_PB_HySA_4431;NumClusterSVs=5;ExactMatchIDs=HG4_PB_HySA_3539;NumExactMatchSVs=1;ClusterMaxShiftDist=0.109375;ClusterMaxSizeDiff=0.09375;ClusterMaxEditDist=0.20155;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=61;DistBack=-76;DistForward=0;DistMin=-76;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=344;REFWIDENED=2:143348221-143348564;PctSeqSimilarity=0.9931;PctSizeSimilarity=0.9839;PctRecOverlap=0;SizeDiff=-1;StartDistance=155;EndDistance=155;GTMatch=0;TruScore=65;MatchId=2923.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:36:./.:0:1:0:0:0/0:16:0:11:0:0/1:46:19:./.:.:.:.:.:.
chr2	192262636	HG2_PB_SVrefine2Falcon2Bionano_1064	C	CCCTCACCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGGCCGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCCGGCTGGGCGGGGGGCTAACCCCCCCATCTCCCTCCCGGACGGGGCGGATGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6525:HG2_PB_HySA_4848:HG2_PB_pbsv_2542:HG4_PB_pbsv_2555:HG4_PB_SVrefine2PBcRDovetail_1343:HG2_PB_SVrefine2PBcRplusDovetail_6053:HG2_PB_SVrefine2PB10Xhap12_1908:HG2_PB_SVrefine2Falcon2Bionano_1064:HG3_PB_SVrefine2PBcRDovetail_1308:HG3_PB_SVrefine2Falcon1Dovetail_1581;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1064:HG2_PB_SVrefine2PB10Xhap12_1908:HG2_PB_SVrefine2PBcRplusDovetail_6053:HG4_PB_SVrefine2PBcRDovetail_1343;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0399334;ClusterMaxSizeDiff=0.0332226;ClusterMaxEditDist=0.205298;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=304;DistBack=198;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=377;REFWIDENED=2:192262637-192263013;PctSeqSimilarity=0.9677;PctSizeSimilarity=0.9901;PctRecOverlap=0.0066;SizeDiff=3;StartDistance=-301;EndDistance=-301;GTMatch=0;TruScore=65;MatchId=2983.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:72:1/1:2:42:0:6:./.:0:2:0:1:1/1:0:35:1/1:2:22:.:.:.
chr2	231201744	HG2_PB_SVrefine2Falcon2Bionano_1185	T	TAATGGCGTTTCTAGTTCTAGATCCTTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTTTTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTCTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTCGCCCACTTTTTGATTGGGTTGTTTGTTTCTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAACCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTATGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACATGTAAGTCTTTAATCCACCTTGAATTAATTTTTGTATAAGGTGTAAAGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATACGCAGCGTTATTTCTGAGGGCTCTGTTCTGTTCCGTTGATCTATATCTCCGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCATGATGCCTCCAGCTTTGTTCTTTGGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAGTTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTATAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCTTGAGCATGGAATGCCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGGACAAAAAACCAAACACTGCATGTTCTCACTCATAGATGGGAACTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGAGGGGAGAGGGATAGCATTAGGAGATATACCTAATGCTAAATGATGAGTTAATGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCGGCACATTGTGCACATGTACCCTAAAACTTAAAGTAGAATAATAATTTAAAAAAAAAAGAAAAAGGAAAGAGGTTTAATTGGCTCATGGTTTCACAGGCTGTACAGGAAGCATAGTGCTGGCATCTGCTTGGCTTCTGGGGAGGCCTTGGGAATCTTACAATCATGGCTGACAGAAGATGAAGAGGGAGCAGATACGTCTTACATGGCAGGAGTGGGAGCAAGATTGGGGGTCCTACACACTTTTAAACAAGCAGACCTTGCAAGAATTACAAGAACTCATTCACTATCAGGAGAACAGCACCAAGTGGACGGTGCTAAACCATTCATGAGAAATACCTCCATGATCCAATCACCTCCACCAGGCCTCACCTCCCACATTTGAGATTACAATGCAACATGAGATTTGGGTGAGGACACAGATCCAAACTACATCATATGTCTTCTAATTCTTTCATTTTTAATCTTATTGAGTTGTTTTATTTTTCATGTGTCTCTTATAAATGGAATATAGCTGAATTCTGTTCATTCAATTTAGGTATCTCTATGTTTTACGCATCACTTTTATTTTATTGGCATTTATTTTTATCACCACTCTGTATATATTCTTGCTGTCTTATTTTTTAATGAATATTTAAAAGAATTTCTATTTTTTCTCTCATATTCTTTCTTACCTGTCTTTGGATTGGTTGCATTTCCTTTGATCCATATTTTTTCCTCCAATACATCCTTTTTTTTTTGGTTAAAAGTTAATTTTTAGTGAACAATTAAAAGACTGTTGTTCTATGAATGTCTGGAGTCACTTGGTATCTTTTCCTAAACTAAAAACTGTAACTTGATTTTATTTCCCTCCTCCATCCTCCTATCCCATCCATAAACTTTTTGAGTCCTTGTAGTCTAAAAATATCTTTATTTCACTTTCATACTTGGGTGAGTACTTGGGAAGGTTCAAAATGATTTTTCATTTAAAAATTGGACATTTTTCTTCGTTGTATTCTTGCGTTCAGTGACCCTTATGAAAATTCCAGCTTTAATCAGGCTTTCATTCCTTTGTGGGTAAGCTGCTTTTACTTTCTAAAACTTTTATGATTTGCTAGTTTGGTCCTTGATGTGCTAGATTTTCATGATAATATATCTAGGTAAAAGCATTAAATATTCATTTTCTACACTGACATGCTTTTTTTAAAAAAAATGCATGTAAGACTGTTTACTTATTTAGTTATGGGGGGTGTGGAGAATGTACATATTTCAGTTAAAATCATTCCTAAAGTTTGAGAACGCATTTGTCATCCTGCAGAAATCATCTAAATGTGTAAATATAATCAATACTTTAGGAACACAGAACATGATATAAATTGCTTGAATTAAAAAATGACCTAAAGTGAAAATATTTAGTTGTCATTACATTTTTCTTTTTCTTTTCTTTTGTTCAGTGATATTGAGTTATAATTGACAAATTGTATAAATTTAAGGTGTACAACATGATGATTTCATGTATGTTTATATTGTGAAATAATTACCACAATCAAGTTAGTTAAAATATTCATCACACAGAGTTACAATTGTGTGTGTGATAATGTTTAAGATCTACTCTCTTAGCAAATTTCAATTGTATATTACATTAATGTTAACTATTGTCCCCATAGTATCCATTAAAATACCAGTGAATTTTATCTTATAACAGAAAACTTGTACCCCTTGACCAGTATTTCCCCATTCTTCCCAGCCCTTGGCAACTGCCATTTGACTCTGATTGGATGATTCAACCTTTTTAGATTTCATAATATAATTTTTTTTTTTTTAGACAGAGTCTCGCTCTGTGGCCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAACCTCCACCTACTGGGTTCAAGCAATTCCCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGGGCCACCATACCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAAGCTGGTCTCGAACTCCTGACCTCAAGTGACCCGCCAGTCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCCAGCCTCCATAATCTAAATCTAAGACTAATGGAGTCTTATAAAGATTTCTATATATAAGATCATGTTACCTGAAAACAGAGACAATTTTACTTCTTCCTTTCTGATTTGGATGCCTTTAATTTCTTTTTCTTGCCCAATTAATCTGCCTAGGACTTTCAGTACTGTGTTGAATAGAAATGGCAAGAGTGGTCATTGCTGTCTTGTTCTTCATCTTAGGAAAAAAGCTTTCAGCTTTTTATTATTGACTACCATGTTAACCATGGGCTTGTCATACATGGCCTTTATTGTGTTGAAGTATATTTCATTTATACCCAATTTGTTAAAAATTTTCTTTTTCATGAAATGATGTTGAAGTATTCAAATGCTTTTTCTGCATCTATTAAAATGTTCATATAATTTTTGTCCTTTGTTCTGTTAATGTTGAATATCACATTTATTGATTTACATGTTGCATCATCCTTGCGTCCCAGGGATAAATCCCACTTGATCATGATAAGTGAACATTTTAGTATATTGTTAAATTTGGTTTGCTTTGGTTATATTTTGTTGAGAATTTTTGTTTCTATGTATATTAGAGATATTGGCCTGTAATTTTCTTTTCTTATAGTGTCCTAGACTTAGGTATCAAGACAATGCTCACAAAATGAGTTTGGAAGTGTTGCCTGCCTTTCATTGTTTTTGGAATAATTTGTATTAATTTATTCTTAAATCTCTGGTAGAATTCACCAGCATAGCCATCTGGTCCTGCGTTTTTCTTTTCTTTTTTTTTTTTTTAATTATACTTTAAGTTTTAGGGTACCTGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAACATTAGGTATATCTCCCGATGCTATCCCTCCCCCTTCCCCCCACCCCACAACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAGTTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTCCTTGCAATAGTTTACTGAGAATGATGATTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTCTTATGGCTGCATAGTACTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGTATGTGTCCTTATAGCAGCATGATTTATAGTCCTTTGAGTATATACCAAGTAATGGGATGGCTGTGTCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2035:HG2_PB_PB10Xdip_16921:HG2_PB_SVrefine2Falcon1plusDovetail_6663:HG2_PB_SVrefine2PBcRplusDovetail_6174:HG2_PB_SVrefine2Falcon2Bionano_1185;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1185:HG2_PB_SVrefine2PBcRplusDovetail_6174;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00201288;ClusterMaxSizeDiff=0.00201288;ClusterMaxEditDist=0.0112812;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=4972;DistBack=-78568;DistForward=0;DistMin=-78568;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1107;REFWIDENED=2:231201745-231202851;PctSeqSimilarity=0.9962;PctSizeSimilarity=0.999;PctRecOverlap=0.7999;SizeDiff=5;StartDistance=-992;EndDistance=-992;GTMatch=0;TruScore=93;MatchId=3054.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:32:0|1:29:1:1:27:./.:1:0:0:1:./.:2:4:0/1:171:284:.:4367:.
chr2	231869626	HG2_PB_SVrefine2PBcRplusDovetail_6181	A	ACATCACCACTACTACCACCACTGTCAGCACCATCACCATTATCACCATCATCCTCATCACCATCACCATCCTCATCACCATCCTCACCATCATCACCACCATCATCATCACCATCACCATCATCACCATCATCATCACCACCACCACCATCACCATCATCACCACCACCATCATCACCATCACCATCCTCATCACCATCACCATCATCACCACCACCATCATCATCACCCACCACCATCACCATCACCATCACCATCATCACCATCATCATCACCATCACCATCTTCACCATCACCATCATCACCACCATCATCACCATCACCATCACCACCACCATCACCACCATCATCATTACCATCATCACCATCACCATCATCATCACCATCACCACCACCATCACCACCATCATCATCACCATCATCACCATCATCATCACCATCACCACCACCACCATCATCACCACCATCACCACCACCATCATCACCACCACCACCACTATCACCATCATCACCACCACCACCACAATCACCACCATCACCACCACCACCACCACCACCACCATCATCACCACCACCACCATCACCACCACCACATCACCACCACCACCATCACCACCACCACCACCATCACCACCATCATCACCACCACCACCATCACCATCATCATCACCATCATCACCACCACCATCATCACCACCACCATCACCATCATCACCACCACCATCACCATCACATCATCATCACCACCACCACCATCATCACCACCACCACCATCATCACATCACTATCATCACCACCACCATCACCATCATCATCACCATCACCATCATCACCATCACCATCACCACCATCAACATCACCATCATCACCATCATCACCACCATCATCACCATCACCATCACCACCATCATCATCACCATCACCATCATCATCATCACCACCATCATCACCACCATTACCATCATCATCACTATCACCACCACCACCATCACCATCACCACCATCACCATCACCACCACCACCATCACCATCACCACCACCACCATCACCATCATCACCACCACCACCATCAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1668:HG2_PB_SVrefine2PB10Xhap12_2046:HG2_PB_pbsv_2751:HG2_PB_SVrefine2Falcon1plusDovetail_6669:HG2_PB_SVrefine2PBcRplusDovetail_6181:HG2_PB_PB10Xdip_16934:HG4_PB_SVrefine2PBcRDovetail_1458:HG3_PB_SVrefine2PBcRDovetail_1376:HG2_PB_SVrefine2Falcon2Bionano_1190:HG2_PB_SVrefine2PB10Xhap12_2045:HG3_PB_SVrefine2Falcon1Dovetail_1717;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6181;NumExactMatchSVs=1;ClusterMaxShiftDist=0.27256;ClusterMaxSizeDiff=0.27256;ClusterMaxEditDist=0.319664;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1072;DistBack=8566;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=727;REFWIDENED=2:231869660-231870386;PctSeqSimilarity=0.9532;PctSizeSimilarity=0.958;PctRecOverlap=0.3551;SizeDiff=45;StartDistance=-669;EndDistance=-669;GTMatch=1;TruScore=75;MatchId=3059.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:58:1/1:3:16:1:20:./.:37:62:3:68:0/1:20:15:./.:12:195:.:1311:.
chr2	234371891	HG2_PB_SVrefine2PBcRplusDovetail_6198	A	ACTCCGCACGCCACTCACCTCCTCACTGCACGCGTCTCCTCACTGCACGCATCACCTCACTCCACACATCACCTCACTCCACACATCTCCTCACTGCACGCATCTCACTCCACACATCACCTCACTCCACACATCTCCTCACTCCACGCATCTCCTCACTCCACGCAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1390:HG2_PB_SVrefine2Falcon2Bionano_1207:HG4_PB_SVrefine2PBcRDovetail_1478:HG2_PB_SVrefine2PBcRplusDovetail_6198:HG2_PB_SVrefine2Falcon1plusDovetail_6688;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6198:HG4_PB_SVrefine2PBcRDovetail_1478;NumExactMatchSVs=2;ClusterMaxShiftDist=0.202381;ClusterMaxSizeDiff=0.202381;ClusterMaxEditDist=0.202381;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=167;DistBack=24457;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=495;REFWIDENED=2:234371892-234372386;PctSeqSimilarity=0.9469;PctSizeSimilarity=0.9401;PctRecOverlap=0;SizeDiff=10;StartDistance=-270;EndDistance=-270;GTMatch=0;TruScore=62;MatchId=3069.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:68:1/1:0:14:0:16:./.:0:0:0:0:./.:2:1:./.:.:.:.:.:.
chr2	236396773	HG2_PB_SVrefine2PB10Xhap12_2079	C	CTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTCAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGTCCTTCTTTTTTAAGACAGAATCTCACTCTGCCACCCAGGCTGGAGAGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCTTCCTGAGTAGCTGGGACTACAGGCATGCACAACCATGCCCAGCTGATTTTTTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2079:HG2_PB_PB10Xdip_16986:HG2_PB_pbsv_2799:HG2_PB_HySA_5442:HG3_PB_HySA_4412:HG2_PB_SVrefine2Falcon1plusDovetail_6704:HG3_PB_SVrefine2PBcRDovetail_1402;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2079;NumExactMatchSVs=1;ClusterMaxShiftDist=0.15534;ClusterMaxSizeDiff=0.15534;ClusterMaxEditDist=0.19788;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=432;DistBack=-433;DistForward=261;DistMin=-433;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=698;REFWIDENED=2:236396774-236397471;PctSeqSimilarity=0.9971;PctSizeSimilarity=0.9907;PctRecOverlap=0.0092;SizeDiff=4;StartDistance=-427;EndDistance=-427;GTMatch=0;TruScore=66;MatchId=3073.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:27:./.:9:15:4:4:./.:4:12:7:3:0/1:9:2:0/1:5:8:.:.:.
chr2	239675690	HG2_PB_SVrefine2Falcon2Bionano_1231	C	CGTTCTTGTCTATGACATATGTACACATTGACTGCTCCTCTGTCTCACTGAGTTCTTGTCTATTACACAGGTGAACATTGATTGTGCCTCTGTTTCAGTGAGTTCTTGTCTATTACACAGGTACACATTGAATACTCCTCTGTTTCAGTGAGTTCTTGTTTATTACACAGGTGCACATTGATTGCTCCTCTGTTTCAGTGAGTTCTTGTCTATTACACAGGTACACATCGATTACTCCTCTGTTTCAGTGAGTTCTTGTCTATTACACAGGTACACATCGATTACTCTTCTGTTTCAGTGAGTTCTTGTCTATTACACAGGTACACAGTGATTACTCATCTGTTTCAGTGAGTTCTTGTCTATTACAAAGGTAGACAGTGATTGCTCCTCTGTTTCAGTGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2095:HG2_PB_HySA_5491:HG4_PB_HySA_4341:HG3_PB_HySA_4459:HG3_PB_pbsv_2819:HG2_PB_PB10Xdip_17029:HG2_PB_pbsv_2833:HG2_PB_SVrefine2Falcon1plusDovetail_6719:HG4_PB_SVrefine2PBcRDovetail_1501:HG3_PB_SVrefine2Falcon1Dovetail_1773:HG4_PB_SVrefine2Falcon1Dovetail_1724:HG2_PB_SVrefine2PBcRplusDovetail_6225:HG3_PB_SVrefine2PBcRDovetail_1418:HG2_PB_SVrefine2Falcon2Bionano_1231;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1231:HG3_PB_SVrefine2PBcRDovetail_1418;NumExactMatchSVs=2;ClusterMaxShiftDist=0.172324;ClusterMaxSizeDiff=0.167102;ClusterMaxEditDist=0.355091;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=400;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=836;REFWIDENED=2:239675691-239676526;PctSeqSimilarity=0.9744;PctSizeSimilarity=0.9975;PctRecOverlap=0;SizeDiff=1;StartDistance=-536;EndDistance=-536;GTMatch=0;TruScore=65;MatchId=3083.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:71:1/1:5:21:1:22:./.:2:5:1:5:./.:6:0:./.:3:5:.:.:.
chr2	239685106	HG2_PB_SVrefine2PBcRplusDovetail_6226	C	CCAGCATAGAAAGAGGAAGGACGTTTGTCAGAGAAGTCACTGAGCATGGAAAGAGGAAGGACGTTTGTCAGAGAAGTCACTCAGCATGGAAAGAGGAAGGACGTTTGTCAGAGAAGTCACTCAGCATGGAAAGGGGACGGATGTTTGTCAGAGAAGTCACTCAGCATGGAAAGAAGACGGACGTTTGTCAGAGAAGTCACTCAGCATGGAAAGAGGAAGGACGTTTGTCAGAGAAGTCACTCAGCATGGAAAGAGGAAGGACGTTTGTCAGAGAAGTCACTCAGCATGGAAAGAAGAAGGACGTTTGTCAGAGAAGTCACTGAGCATGGAAAGAGGAAGGACGTTTGTCAGAGAAGTCACTGAGCATGGAAAGAGGAAGGACGTTTGTCAGAGAAGTCACT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6226:HG4_PB_SVrefine2Falcon1Dovetail_1725:HG3_PB_SVrefine2Falcon1Dovetail_1775:HG2_PB_SVrefine2Falcon1plusDovetail_6720;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6226;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0950119;ClusterMaxSizeDiff=0.0950119;ClusterMaxEditDist=0.231144;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=400;DistBack=7075;DistForward=60;DistMin=60;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1144;REFWIDENED=2:239685107-239686250;PctSeqSimilarity=0.9683;PctSizeSimilarity=0.9112;PctRecOverlap=0;SizeDiff=-39;StartDistance=-934;EndDistance=-934;GTMatch=0;TruScore=62;MatchId=3084.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:36:./.:14:8:21:18:./.:0:5:0:5:1/1:0:23:./.:2:6:.:1382:.
chr2	241098624	HG3_PB_assemblyticsfalcon_15045	A	AGCACCTGAATGTGGGGTACACGTCACACGCAGCCCCCCATGGTACCACATCCTGACGCATCTGAATGGGGTAGACGTCACACGCAGCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACGCAGCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTAGACGTCACATGCAGCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACACGCAGTCCCCCACGGTACCACATCCTGATGCACCTGAATGTGGGTACACATCACACGCAGCCCCCCATGGTACCACATCCTGACGCACCTGAATGTGGGTACACGTCACACGCAGCCCCCCACGGTACCACATCCTGATGCATCTGAATGTGGGGTACACGTCACACGCAGCCCCCCATGGTACCACATCCTGATGCATCTGAATGTGGGGTACACGTCACACACAGCCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACGCACCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACAGCACCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACGCAGCCCCCCATGGTACCACATCCTGACGCATCTGAATGTGGGGTACACGTCACACGCAGCCCCCCACGGTACCACATCCTGATGCACCTGAATGTGGGGTACACGTCACACGCAGCCCCCCCATGGTACCACATCCTGACGCATCTGAATGTGGGGTAGACGTCACACACAGCCCCCCCACGGTACCACATCCTGATGCATCTGAATGTGGGGTACACGTCACACACAGCCCCCCATGGTACCACATCCTGACGCATCTGAATGTGGGGTACACATCACACGCAGCCCCCCCACGGTACCACATCCTGACGCACCTGAATGGGGTACACGTCACACGCAGCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTAGACGTCACATGCAGCCCCCCCATGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACACAGCCCCCCACGGTACCACATCCTGATGCACCTGAATGTGGGGTACACGTCACACGCAGCCCCCCACGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACGCAGCCCCCCATGGTACCACATCCTGACGCACCTGAATGTGGGGTACACGTCACACACAGCCCCCCACGGTACCACATTCCTGATGCACCTGAATGTGGGGTACACTCACACGCAGCCCCGCAGGTACCACATCCTGATGCACCTGAATGTGGGTAGACGTCACACGCAGCCCCCCACGGTACCACATCCTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6741:HG3_PB_assemblyticsfalcon_15045:HG3_PB_SVrefine2Falcon1Dovetail_1795:HG2_PB_SVrefine2PBcRplusDovetail_6247:HG2_PB_SVrefine2PB10Xhap12_2119:HG2_PB_SVrefine2Falcon2Bionano_1255;NumClusterSVs=6;ExactMatchIDs=HG3_PB_assemblyticsfalcon_15045;NumExactMatchSVs=1;ClusterMaxShiftDist=0.16113;ClusterMaxSizeDiff=0.16113;ClusterMaxEditDist=0.212226;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1396;DistBack=35;DistForward=10248;DistMin=35;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1633;REFWIDENED=2:241096992-241098624;PctSeqSimilarity=0.9801;PctSizeSimilarity=0.9887;PctRecOverlap=0.5994;SizeDiff=-16;StartDistance=558;EndDistance=558;GTMatch=0;TruScore=85;MatchId=3092.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:38:0|1:32:7:2:20:./.:8:0:1:0:0/0:10:0:0/1:21:13:.:1937:.
chr2	241466630	HG2_Ill_SVrefine2DISCOVARplusDovetail_7374	T	TGGTGGATTGATGGATGAATGGATGGGTGGGTGGATGGATGAAAGATGCATGAATAGATTGATAGATGGATAGATGGGTAGGTGAGTGGATGACTGGGTAGGTAGGTGGGTAGATGAATGGATGGTTGGATGAATGGATGGTTGGATGAATGGATGTTGCATGGGTAGACTGATGGATGAATGGATGGGTGGGTGGGTAGGTAGATGAATGAGTAGGTAGATGGGTAGATGAATGGATGGCTGGATGAATGGATGTTCCATGGGTGGACTGATGGATGAAGGGGTTGGTGGGTGGATCAATGTTGCGTGAGTATACTGATGGATGAATGGATGGAAAGGTGGGTGAGTGGGTGAATTAATGGGTAGGTGGGTGGGTAGATGAGTGGATGGCTGGATAAATGGATGTTAAGTGGGTGGACTGATGAATGACTGGACGGGTGGGTGGGTGGACAAATGGGTAGGTGGGTAGGTAGATGAATGGATGGCTGCATGAATGGATATTGCATGCATGAATTGATGGATGAATGGATGGCTGGATGGGTAGATGAATAGGTAGGTGTGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6747:HG2_Ill_breakscan11_3280:HG2_PB_pbsv_2887:HG3_PB_pbsv_2864:HG4_PB_pbsv_2895:HG2_PB_PB10Xdip_17083:HG4_Ill_MetaSV_2905:HG4_Ill_GATKHCSBGrefine_2013:HG2_Ill_MetaSV_2813:HG3_Ill_MetaSV_2957:HG3_Ill_GATKHCSBGrefine_1941:HG2_Ill_GATKHCSBGrefine_1920:HG3_PB_HySA_4500:HG2_PB_HySA_5538:HG4_PB_HySA_4401:HG4_Ill_SVrefine2DISCOVARDovetail_2163:HG3_PB_SVrefine2Falcon1Dovetail_1802:HG4_PB_SVrefine2Falcon1Dovetail_1749:HG4_PB_SVrefine2PBcRDovetail_1525:HG3_PB_SVrefine2PBcRDovetail_1440:HG3_Ill_SVrefine2DISCOVARDovetail_2140:HG2_PB_SVrefine2PBcRplusDovetail_6255:HG2_PB_SVrefine2PB10Xhap12_2129:HG2_PB_SVrefine2Falcon2Bionano_1262:HG2_Ill_SVrefine2DISCOVARplusDovetail_7374;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7374:HG2_PB_SVrefine2Falcon2Bionano_1262:HG2_PB_SVrefine2PB10Xhap12_2129:HG2_PB_SVrefine2PBcRplusDovetail_6255:HG3_Ill_SVrefine2DISCOVARDovetail_2140:HG4_Ill_SVrefine2DISCOVARDovetail_2163;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0679523;ClusterMaxSizeDiff=0.0679523;ClusterMaxEditDist=0.289377;PBcalls=15;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=562;DistBack=16971;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=569;REFWIDENED=2:241466631-241467199;PctSeqSimilarity=0.9548;PctSizeSimilarity=0.9359;PctRecOverlap=0;SizeDiff=36;StartDistance=-550;EndDistance=-550;GTMatch=0;TruScore=63;MatchId=3096.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:1:24:2:19:1/1:2:413:1:427:./.:0:4:0/1:3:15:.:.:.
chr2	242529363	HG2_PB_SVrefine2Falcon1plusDovetail_6770	A	ATGATAATGATGGGCACTAGGACACTCAGAGCTGCTCGGCTGACGATGATGGGCACTAGGACACTCAGAGCTGCTCGGCTGACGATGACGGGCACTAGGACACGCAGAGCTGCTCGGCTGACGATGATGGGCACTAGGACACGCAGAGCTGCTCGGCTGACGATGATGGGCACTAGGACACTCAGAGCTGCTCGGCTGATGATAATGGGCACTAGGACACTCAGCTGCCCGGCTGATGATAATGGGCACTAGGACACACAGAGCTGCTCGGCTGATGATAATGGGCACTAGGACACTCAGAGCTGCTCGGCTGATGATAATGGGCACTAGGACACTCAGAGCTGCCCGGCTGATGATGAGGGGCACTAGGACACTCAGAGCTGCCCGGCTGATGATGATGGGCACTAGGACACTCAGAACTGCCCGGCTGATGATGAGGGGCACTAGGACACTCAGAGCTGCTCGGCTGATGATAATGGGCACTAGGACACGCAGAGCTGCTCGGCTGATGATAATGGGCACTAGGACACTCAGAGCTGCTCGGCTGATGATAATGGGCACTAGGACACACAGAGCTGCTCGGCTGATGATGGGCACTAGGACACTCAGAACTGCCCGGCTGATGATGAGGGGCACTAGGACACTCAGAGCTGCTCGGCTGATGATGATGGGCACTAGGACACGCAGAGCTGCCCGGCTGACGATGATGGGCACTAGGACACTCAGAGCTGCTCGGCTGATGATGATGGGCACTAGGACACACAGAACTGCTTGGCTGATGATCATGGGCACTAGGACACTCAGAACTGCCCGGCTGATGATGAGGGGCACTAGGACACTCAGAGCTGCTCGGCTGATGATAATGGGCACTAGGACACGCAGAGCTGCCCGGCTGACGATAATGGGCACTAGGACACACAGAACTGCCCGGCTGACGATGATGGGCACTAGGACACACAGAACTGCCCGGCTGACGATGATGGGCACTAGGACACACAGAGCTGCTCGGCTGACGATGATGGGCACTAGGACACTCAGAGCTGCTTGGCTGATGATGATGGGCACTAGGACACGCAGAGCTGCTCGGCTGATGATGATGGGCACTAGGACACTCAGAGCTGCTCGGCTGATGATCATGGGCACTAGGACACACAGAACTGCCCGGCTGATGATGAGGGGCACTAGGACACACAGAACTGCCCGGCTGATGATGAGGGGCACTAGGACACTCAGAAGTGCCCGGCTGATGATGAGGGGCACTAGGACACTCAGAAGTGCCCGGCTGATGATGAGGGGCACTAGGACACTCAGAGCTGCCCGGGTGATGATAATGGGCACTAGGACACGCAGAGCTGCTCGGCTGATGATAATGGGCACTAGGACACTCAGAGCTGCTCGGCTGATGATGATGGGCACTAGGACACACAGAGCTGCTCGGCTGATGATGATGGGCACTAGGACACTCAGAGCTGCCCGGCTGATGATGATGGGCACTAGGACACTCAGAGCTGCCCGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1282:HG2_PB_pbsv_2926:HG3_PB_SVrefine2Falcon1Dovetail_1823:HG2_PB_PB10Xdip_17166:HG2_PB_SVrefine2PBcRplusDovetail_6279:HG2_PB_SVrefine2PB10Xhap12_2158:HG2_PB_SVrefine2Falcon1plusDovetail_6770;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6770:HG2_PB_SVrefine2PB10Xhap12_2158:HG2_PB_SVrefine2PBcRplusDovetail_6279;NumExactMatchSVs=3;ClusterMaxShiftDist=0.196917;ClusterMaxSizeDiff=0.196216;ClusterMaxEditDist=0.241766;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1516;DistBack=1931;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1320;REFWIDENED=2:242529364-242530683;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3104.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:./.:0:1:0:0:./.:0:0:0:0:./.:0:0:./.:6:63:.:4302:.
chr3	32006869	HG2_PB_SVrefine2PBcRplusDovetail_7310	A	ATATATATTATGTATAATATATAATATAAAATATATATTATATATAATAGATAATATATAATATATATTATATAATATATAATTTATATAATATATAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7895:HG2_PB_SVrefine2PBcRplusDovetail_7310:HG2_PB_SVrefine2PB10Xhap12_2315:HG2_PB_SVrefine2Falcon2Bionano_1412;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7895:HG2_PB_SVrefine2PBcRplusDovetail_7310:HG2_PB_SVrefine2PB10Xhap12_2315:HG2_PB_SVrefine2Falcon2Bionano_1412;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=97;DistBack=15709;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=143;REFWIDENED=3:32006870-32007012;PctSeqSimilarity=0.931;PctSizeSimilarity=0.8661;PctRecOverlap=0;SizeDiff=-15;StartDistance=-170;EndDistance=-170;GTMatch=0;TruScore=59;MatchId=3594.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:./.:0:0:0:0:./.:0:0:0:0:0/0:20:0:./.:.:.:.:.:.
chr3	49643722	HG2_Ill_250bpfermikitraw_4427	T	TATATATATTAAAAATATATATAATATATATTAAAAATATATATTATATATATTAAAATATATATATA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_4427:HG3_PB_HySA_5011:HG4_PB_pbsv_3268:HG4_Ill_GATKHC_5382:HG4_Ill_GATKHCSBGrefine_2267:HG4_Ill_250bpfermikitraw_4484:HG3_Ill_250bpfermikitraw_4359:HG2_Ill_GATKHC_5304;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4427:HG3_Ill_250bpfermikitraw_4359:HG2_Ill_GATKHC_5304;NumExactMatchSVs=3;ClusterMaxShiftDist=0.13986;ClusterMaxSizeDiff=0.125874;ClusterMaxEditDist=0.191781;PBcalls=2;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=95;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=43;REFWIDENED=3:49643721-49643766;PctSeqSimilarity=0.4668;PctSizeSimilarity=0.2233;PctRecOverlap=0.2226;SizeDiff=-233;StartDistance=34;EndDistance=34;GTMatch=0;TruScore=30;MatchId=3625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:35:./.:5:12:13:18:./.:0:0:0:0:0/1:4:26:./.:.:.:.:.:.
chr3	56754114	HG2_PB_assemblyticsfalcon_17625	C	CAACTCCAGACGCGCTGCCTTAAGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCAGGAACCCACCAGAAGGAAGGAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2052:HG2_PB_assemblyticsfalcon_17625:HG4_PB_assemblyticsfalcon_17236:HG3_PB_pbsv_3245:HG2_PB_SVrefine2Falcon2Bionano_1504:HG4_PB_SVrefine2Falcon1Dovetail_1997:HG2_Ill_GATKHCSBGrefine_2203:HG2_PB_SVrefine2Falcon1plusDovetail_7994:HG3_PB_HySA_5071;NumClusterSVs=9;ExactMatchIDs=HG2_PB_assemblyticsfalcon_17625;NumExactMatchSVs=1;ClusterMaxShiftDist=0.11;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.17;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=100;DistBack=20;DistForward=6104;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=185;REFWIDENED=3:56753930-56754114;PctSeqSimilarity=0.9865;PctSizeSimilarity=0.9901;PctRecOverlap=0;SizeDiff=-1;StartDistance=120;EndDistance=120;GTMatch=0;TruScore=65;MatchId=3649.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:16:./.:27:1:7:15:./.:0:0:0:0:0/1:21:8:./.:.:.:.:.:.
chr3	76061918	HG3_PB_SVrefine2Falcon1Dovetail_2111	G	GGTAATATGTATAAAGGCAATTGGTGACTGGGCACGGTGGTGTATGCATGTAATCCCAGAAGTAATATGTATAAAGGCAATTGGCGACTGGGCACGGTGGCTTATGCATGTAATCCCAGAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8053:HG4_PB_SVrefine2Falcon1Dovetail_2048:HG3_PB_SVrefine2Falcon1Dovetail_2111:HG3_Ill_SVrefine2DISCOVARDovetail_2541:HG2_PB_SVrefine2PBcRplusDovetail_7448:HG2_PB_SVrefine2PB10Xhap12_2491:HG2_PB_SVrefine2Falcon2Bionano_1560;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1560:HG2_PB_SVrefine2PB10Xhap12_2491:HG2_PB_SVrefine2PBcRplusDovetail_7448:HG3_Ill_SVrefine2DISCOVARDovetail_2541:HG3_PB_SVrefine2Falcon1Dovetail_2111:HG4_PB_SVrefine2Falcon1Dovetail_2048;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00823045;ClusterMaxSizeDiff=0.00823045;ClusterMaxEditDist=0.00823045;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=120;DistBack=15957;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=705;REFWIDENED=3:76061919-76062623;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3682.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:17:50:./.:1:15:6:11:./.:0:0:0:0:0/0:16:0:./.:.:.:.:.:.
chr3	76063684	HG2_PB_PB10Xdip_20956	GCACGA	CCTGGTGGTTTATGCATGTAATCCCAGAAGTAATATGTATAAAGGCAATTGGCAGCTGGCCTGG	20	PASS	ClusterIDs=HG3_Ill_250bpfermikitraw_4559:HG2_PB_PB10Xdip_20957:HG2_PB_PB10Xdip_20956:HG2_PB_HySA_6416:HG4_PB_HySA_5072;NumClusterSVs=5;ExactMatchIDs=HG2_PB_PB10Xdip_20956:HG2_PB_PB10Xdip_20957;NumExactMatchSVs=2;ClusterMaxShiftDist=0.048;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.08;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=-143;DistForward=-1;DistMin=-143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=3:76063683-76063690;PctSeqSimilarity=0.936;PctSizeSimilarity=0.9831;PctRecOverlap=0;SizeDiff=-1;StartDistance=84;EndDistance=89;GTMatch=0;TruScore=63;MatchId=3683.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:69:1/1:1:23:2:20:./.:0:0:0:0:./.:1:17:./.:.:.:.:.:.
chr3	106377804	HG3_Ill_250bpfermikitraw_4779	C	CATATATATATATATATATATATGCCATATATATATATATGGCATATATATATATAGTT	10	PASS	ClusterIDs=HG2_Ill_breakscan11_3350:HG4_Ill_GATKHCSBGrefine_2463:HG4_Ill_250bpfermikitraw_4972:HG4_Ill_150bpfermikitraw_4716:HG3_Ill_GATKHCSBGrefine_2386:HG3_Ill_250bpfermikitraw_4779:HG3_Ill_150bpfermikitraw_4616:HG2_Ill_GATKHCSBGrefine_2372:HG2_Ill_250bpfermikitraw_4887:HG2_Ill_150bpfermikitraw_4536;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4536:HG2_Ill_250bpfermikitraw_4887:HG2_Ill_GATKHCSBGrefine_2372:HG3_Ill_150bpfermikitraw_4616:HG3_Ill_250bpfermikitraw_4779:HG3_Ill_GATKHCSBGrefine_2386:HG4_Ill_150bpfermikitraw_4716:HG4_Ill_250bpfermikitraw_4972:HG4_Ill_GATKHCSBGrefine_2463;NumExactMatchSVs=9;ClusterMaxShiftDist=0.017094;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.017094;PBcalls=0;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=58;DistBack=0;DistForward=26;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=250;REFWIDENED=3:106377805-106378054;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3737.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:24:0|1:30:3:6:19:./.:0:0:0:0:0/1:24:12:./.:.:.:.:.:.
chr3	111879112	HG2_10X_SVrefine210Xhap12_2636	A	AGTTTTTTTTCTTTTATTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTGTACATGTGCCATGCTGGTGTGCTGCACCCACTAACTTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTTCCCCCTCCCCCCACCCACAACAGTCCCCAGAGTGTGATGTTCCCCTTCCTGTGTCCATGTGATCTCATTTTTCAATTCCCACTTATGAGTGAGAGTATGCGGTGTTTGGTTTTTTGTTCTTGAGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCATGTCCCCACAAAGGACATGAACTCATCATTTTTTATGGCTACATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGTAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATTGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGCAAAAGTGTTCCTATTTCTCCACATCCTCCCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGACCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATTTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCACCCACTTTTTGATGGGGTTGTTTGTTTTTCTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCGGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCAATTGCTTTTTGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTCTTTAATCCATTGTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCTCATTGCTTATTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCGTTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGCAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCGTGAAGAGGTCCTTCACGTCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCACTTGTGAATGGCAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGCACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATGAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTATCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGACTACCCTTTATTTCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTGTGTTGAATAGCAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCGAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGGATTTTGTTAAAGGCCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGAGTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGACCATGGTGGATTATCTTTTTGATGTACTGCTGGATTCATTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACCCTTTTTGGTTGGTAAGCTATTGATTATTGCCACAATTTCAGCTCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGCGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCTATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTAATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATATGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTTGTCTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATATAGTTGAGCGGTTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGACAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCCAGTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCCTCTTGGTGCAGAGCTGAGTACAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCACTTGTGTTGGGTGCATATATATTTAGAATAGTTAGCTCTTCTTGTTGAATTTATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATTTTCCTCCATCCTTTTATTTGGAGCCTATGTGTGTCTCTGCACGTGAGTTGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATACAATTTGCCAGTCTGTGTCTTTTAATTGGAGCACTTAGTCCATTTACATTTAAAGTTAATATTGTTTTGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTATTTTGCTCGTTAGTGGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCAGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGCCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTCGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGTGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATTCTGCAGAGTGTTTTCCAACTTGGTTTCATTCTCCCCATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCGTCGCTGATACCCTTTCTTCCAGTTGATTGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTATATTGGTTATTCTAGTTATACATTCTTCTAAGTTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCATAGCTCAGAGTAATTTGATTGTCTGAAGCCTTCTACTCTCAGCTCGTCAAAGTCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGCGGAACTGCGTTCCTTTGGAGGAGGAGAGGCCCTCTGCTTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATGTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTTGGTGTGGATGTCCTTTCTGTTTGTTAGTTTTCCTTCGAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCATGTGAGGTGTCAGTGTGCCCCTGTTGGGGGATGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGTCAGGCACTCACTTGAGGAGGCAGTCTGCCCCTTCTCAGATCTCCAGCTGCGTACTGGGAGAACCACTGCTTTCTTCAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCTCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCAGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCACAGACTACTGTGCTAGCAATCAGCGAGACTCCATGGGCGTAGGACCCTCCGAGCCAGGTGCGGGATATAATCTCGTGGTATGCCGGTTTTTAAGCCCGTCGGAAAAGCGCAGTATTCGGGTGGGAGTGACCCAATTTTCCAGGTGCCGTCCGTCACCCCTTTCTCTGACTAGGAAAGGGAACTCCCTGACCCCTTGCACTTCCTGAGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCACACGGTGTGCGCACCCACTGACCTGTGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCATGCTGGGAGCTGTAGACTGGAGCTGTTCCGAATCTTGGCTCACAGCCCTCAATAAGTTATTTAAAACTAATACCAACTTAACTTTGACTGCAAAAAAGAGACAGAAGAAACAAACACACAAACAAAGACATCTGTACACATTAATTCCCAACTTACCCCACATTTTGATTTTTAATGTCACAACTTGCATTTTATATTGCTTATCTCTTTAAAATTGTTGTAGTTAGTATTATCTTAAATATTTTGTCTTTTGTTCTTCTTAGTAGGGATATAAGTGATTCACACACCATGATTACCATATTAGTGTAACAATCACATTGATATAATTTTCTTTCCATTTGAAGAATTTCCTTTAGCATTTCTTATAGGACAGGTCTGGTAGTGATAAATCCCCTCAAGTTTTTTTTTTGGTCTGGGAAAGTCCTTATTTCTCCTTTCTTTCTGAAGTTTAGCTTTTCTGAGTACAGTTTTCGTGCTTGGCAGATTTTTTTTTTTTCTTCAGCACTTTGAATATATCTTTCTACTCCTCCTGGCCTGTGAGGTTTCTGTTGAGAAGTCTGCTTTCAGGCATATTGGATTTCCCTTACATATTATTTCCTTCTATTTTTTCCTCATTGCTTTTGCTCAAAAGTCCCTTTTCCTTTCTTTATCTTTGGCTTTTGAGTACCTGATTATAATGTTTTGGGGTATTCTTATTTGAGTTAAATCTGATTGATGACTTAATCTTTTTGTATCTAGATATTTATCTCCTTGTCCAGGTTTGTAAAGATTTCTGTTATTTATTAAAACAAACTTTATACAACTCTTTCTTTCTCAGTTCCCTTTTTAACTTCAAAAACCAAAATATTTGTTCTTTTGATGTTGTCACCTAGACCTTGTAAGATATCTTTATTCTTTTTTTAATTCTTTTTCTCCTCTGACTCTATTTTCAAATGGACTGTCTTCAACTTCACTGATTCCTTCTTCTATTTTATCAATTCTGCTGTTGATGGTATTTCATTAATTTTATTTTTCAGCTTTAGGACTTCTGTTTGATTTTTAAAAATTTTGATTTCTGTTAAATTTCATTGATAAATTTCTGAATTCATTCTGTTTTCTTGAAGTTCAGAGAGTTTCCTTATAATGTTTTTTTGAATTCTTTGAGAGATCACACATCTCCATCACTTTAGGGTTGGTTTCTGACATCTTATTTTGTGCATTTGGTGAGGTCATATTTCTCTAAATATTCTTGATGCTTGTGGACATGTACATTGAGGGATTAGGTATTTATTTTAGTCTCCACAGTTTGCCTTTGCCTGTCCCTGTCTGTCTTTGGAGAGCCTTCCATGGATTCTGGCAGACTGATTGTTTAGTTACCTGAATCTGTGATCACTGCAGCCCTCTCAGCACTAGAGGATGCTCTAAGCCCAGGCTTACCAAGATTCTCACAAGGATTTCAAGGTTGATTTGGTTTTAAGGCCCAGATGGACCTGGGGAAGACCCAGGGAGGGTTCTGGGGTTGTGTGGGACTGCTGGTCTGGAATCTGAGTTCAGAAGACTGTCCCAATGGCCCAGATGGATGTGACTCTCTGCCCATCTCTGCATGGATATGTTGGGTCCCTGATTGCAGTGAGAGGAGTTGAAGTTGAGGCTGGGCCCCCTTGTGATCTGCCAGAGAAAGGAGGTTGATAGGCCTGTATTGTTGGCTTAGATGGGCATGCATCACCCAGCAGGTGCCTGCACAAACAAGGCAGTTCCTTGACTGTAGCTGGAGGAGCCAGAGCTGAGACTGTCCCCTCAGGATCTGCTGTGGAACAGAGGCTGGAGAGGTCAGTCTTGCTTCAGAGTAGTGCACATTACCCAGCACAGATAGGATAGCTCCCTGATGTAGTAGGAGGGGACAAAGTTGAGACAGAGCCCTCTGGGGATCGGCTGTGAGATGGAGGCTGGCATGCCTGTCACATCAGTTCAGATAGGTATGTGTTTCCCAGTAGGTCTCTGAACAGATGGGATAGTTCCCTGACTGCAGCAAGAAGGGCTGGAGCTCAGATTGGGTTGATTTGGGATCTGCTGTGGGACACAGACTGGAGAGTCTTGTCTTATTGCTTCAGAGGGGCATGCCTTGCAGGTTTCAGCACAGATGGGATAGTTTACTGGTTGCAGTGGGAGGAGCCAGACCTGAGACTTGGTGCCATCAGGATCTGCTGTGAGTTGGAGTTCGGCAAGCCTGTCAGGGAGGCTCAGACTCCCAGGTTGTGTGATATGGGTGATTCTCTCTCTGGATCCTTGTGTGAGCAGCTCTGAGCTGTGACCTCAGCTGAGAGTGGTTGAAGCTAAACCACAAGGAAACTTTCAGGTTCATCACTGAGATAGATGTTAGCAGGCAGATGAGTTTCTCTGCCAAGGCACAAGTATGCATGATACATCTTGGATCCCTTGACAGATGGTTTTGGTTGCAGGCTCAAGACCAAATGAGGAAGGAGCCAAGCCCCTTGGAGGACAGGACAATTTCAAGACTTGAATGTGGAAGCAAGCTTGTAGTATCAACTACCTGGAGTCAATCTGCTTCTCAAAATGATGCTCCTAGGTTGTGAGCTACGTGAAGACTTTACAAACTCCTATCTAAATTTTGAGGCTCCTGCAGAGAGGCTTTGGGCCATGTATGGGTACAGAATTTCTTTTTCGTGGGATATATGAATGGATTACCTTCTATTCCATTATCTTGGTTATGCCACTCTGTATATGCTTAATCTTAAGGTCAATGGGGACCCATACAATGGCAGTATTTTGTGTCCACATTGATGCAAAATTATATGATTGTACGTAATAAAGATTAAACTCATTTACGTTAGTAATATAATGTTATATTCTTGGTATTTTTACTTGATGTATATCACTGGTTTTTCTTTAACTTTTAGTTTAGGTTTGGGGGTACATGTGAAGAGTTTATTACATATGTAAACACGTTGTCACAGAAGTTTGTTGTGTATATTATTTCATCACCCAGGCATTAAGCCTAGTACCCAATAGTTATCTTTTCTGCTCCTCTCCTTCCTCTCATCCTCCTCCTTCAAGTAGACCCCAGTGTCTGCTATTTCTTTCCTTGCATCACTGGTTTTTCAAAAGTTATAATGTGGAAAATCAAGTTTTTAATGCTTACATAACATTCAATCACGTTGACTGATGTACTGATTTAGTTAACCATTCATTCATCATTATACATTTTTATTATTTCTTATGTTTCATTTTTAAAATATGCTCAATTATCATTTTCTTTTTTAGCTTTATATCTTTAGGATAAACATTTAGATATCATATTATTTAGTCAAAGGGTGTAAACACTTTTATGTCTTTTGGAATCTCCTGATAAATTTACTTTATTGTTTACATTGCTATTAGTAAAGTAAGAATATGTATCAAATTCACTACATTGCTTTTGGTTGAGAGGTATTATAATTCTTATAAAATTTCACAAATCAAATAGACCAAATACATAATTTGTTTCTGTAAACATTAACAACGTTGAACATTTTCCACATTGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2151:HG3_PB_SVrefine2Falcon1Dovetail_2210:HG3_PB_SVrefine2PBcRDovetail_1630:HG2_PB_SVrefine2Falcon1plusDovetail_8143:HG2_PB_SVrefine2PBcRplusDovetail_7535:HG2_10X_SVrefine210Xhap12_2636:HG2_PB_SVrefine2Falcon2Bionano_1642;NumClusterSVs=7;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2636:HG2_PB_SVrefine2PBcRplusDovetail_7535;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00210715;ClusterMaxSizeDiff=0.00200179;ClusterMaxEditDist=0.0042143;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=9500;DistBack=9443;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=5253;REFWIDENED=3:111879113-111884365;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3743.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:42:1/1:0:9:1:13:./.:0:0:0:0:./.:0:7:1/1:0:308:.:.:.
chr3	123829241	HG4_PB_assemblyticsfalcon_17728	A	ATGACATATATGTCATGCTTTGATATATATATGACATATATGTGCTTTGATATATATATGACATATATGTCATTGCTTTGAATATATATGAATATATGTCATGCTTTGATATATATGACATATATGATATATTTATATATATATGACATATATGTCATGCTTTGATATATATATGACATATATGTCATGCTTTGATATATATATGACATATATGTCATGCTTTGATATATATGACATATATGTCATGCTTTGATATATATATGACATATATGTCATGCTTTGATATATATATGACATATATGTCATGCTTTGATATATATATGACATATATGTCATGCTTGATATATAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8166:HG4_PB_assemblyticsfalcon_17728:HG2_PB_pbsv_3594:HG4_PB_SVrefine2Falcon1Dovetail_2178:HG2_PB_SVrefine2PB10Xhap12_2637;NumClusterSVs=5;ExactMatchIDs=HG4_PB_assemblyticsfalcon_17728;NumExactMatchSVs=1;ClusterMaxShiftDist=0.131617;ClusterMaxSizeDiff=0.128755;ClusterMaxEditDist=0.26556;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=348;DistBack=14;DistForward=117268;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=729;REFWIDENED=3:123828513-123829241;PctSeqSimilarity=0.966;PctSizeSimilarity=0.9613;PctRecOverlap=0;SizeDiff=-14;StartDistance=423;EndDistance=423;GTMatch=0;TruScore=64;MatchId=3764.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:70:./.:36:14:1:21:./.:0:0:0:0:0/1:20:7:0/1:8:17:.:.:.
chr3	130587449	HG3_PB_pbsv_3569	T	TTTGCCCGGCCCCGCTAACTGGGAAGTTAGGAAGCCGCCTCTGCCCGGCCAGCCGCCCCGCCCGGGAGGAGGTGGGGGGTCGAGCCCCCGCCTGGCCAGCGCCACCGTCCGGGAGGTAGGGCGCCTC	10	PASS	ClusterIDs=HG2_PB_pbsv_3643:HG2_PB_SVrefine2PB10Xhap12_2670:HG3_PB_pbsv_3569:HG2_PB_PB10Xdip_19920;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_3569;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0722892;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.258824;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=126;DistBack=-109;DistForward=16302;DistMin=-109;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=539;REFWIDENED=3:130587227-130587765;PctSeqSimilarity=0.9737;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=196;EndDistance=196;GTMatch=0;TruScore=65;MatchId=3781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:32:./.:23:12:3:11:./.:0:0:0:0:0/0:19:0:./.:.:.:.:.:.
chr3	186468924	HG4_PB_SVrefine2Falcon1Dovetail_2399	G	GCTCCAGCCTGGGTGACAGAGCAATACCCTATTTCAAAAAAAAAAAAACAAAAAAAAACCGCCCAGGCGCAGTGGTTTCATGCCTGTAATCCCAGGACTTTGGGAGGCTGAGGCGGGCAGATCATGAGATCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAATATAAAAAATTAGCTGGGCAGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCGCCACCGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8380:HG4_PB_assemblyticsfalcon_18220:HG2_PB_HySA_7470:HG2_PB_pbsv_3909:HG2_PB_HySA_7469:HG3_PB_HySA_6118:HG4_PB_pbsv_3940:HG2_PB_PB10Xdip_20260:HG3_PB_pbsv_3828:HG4_Ill_MetaSV_3568:HG2_PB_HySA_7468:HG2_PB_SVrefine2PB10Xhap12_2882:HG2_PB_SVrefine2PBcRplusDovetail_7769:HG3_PB_SVrefine2PBcRDovetail_1846:HG3_PB_SVrefine2Falcon1Dovetail_2463:HG4_PB_SVrefine2PBcRDovetail_2035:HG4_PB_SVrefine2Falcon1Dovetail_2399:HG2_PB_SVrefine2Falcon2Bionano_1857;NumClusterSVs=18;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_2399:HG4_PB_SVrefine2PBcRDovetail_2035;NumExactMatchSVs=2;ClusterMaxShiftDist=0.110517;ClusterMaxSizeDiff=0.110517;ClusterMaxEditDist=0.232394;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=270;DistBack=20433;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1615;REFWIDENED=3:186468925-186459072;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3874.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:1:17:1:23:./.:0:0:0:0:0/1:4:10:./.:.:.:.:.:.
chr3	189918754	HG2_PB_pbsv_3931	T	TATTATATTATATTATAATATATAATAAAATATATTATATATTATATATATAATATAATAAAATATAG	20	PASS	ClusterIDs=HG4_Ill_250bpfermikitraw_5623:HG2_PB_pbsv_3931:HG4_PB_pbsv_3963;NumClusterSVs=3;ExactMatchIDs=HG2_PB_pbsv_3931;NumExactMatchSVs=1;ClusterMaxShiftDist=0.084507;ClusterMaxSizeDiff=0.084507;ClusterMaxEditDist=0.211268;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=94;DistForward=5671;DistMin=94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=221;REFWIDENED=3:189918550-189918770;PctSeqSimilarity=0.9862;PctSizeSimilarity=0.9853;PctRecOverlap=0;SizeDiff=-1;StartDistance=185;EndDistance=185;GTMatch=0;TruScore=65;MatchId=3882.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:31:./.:4:13:7:16:./.:0:0:0:0:0/1:29:13:./.:.:.:.:.:.
chr3	189968302	HG2_Ill_SVrefine2DISCOVARplusDovetail_9108	T	TAGGATATATATATCTATATCTATATCTATATATATATATATATATATGGATATATATATATATATATGGATATATATATATATATGGATATATATATATA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2475:HG2_PB_pbsv_3933:HG3_PB_pbsv_3850:HG3_Ill_SVrefine2DISCOVARDovetail_3097:HG2_Ill_SVrefine2DISCOVARplusDovetail_9108:HG3_PB_SVrefine2PBcRDovetail_1856:HG2_PB_SVrefine2Falcon2Bionano_1871;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9108:HG3_Ill_SVrefine2DISCOVARDovetail_3097;NumExactMatchSVs=2;ClusterMaxShiftDist=0.114833;ClusterMaxSizeDiff=0.0861244;ClusterMaxEditDist=0.200957;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=100;DistBack=-1;DistForward=2;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=4;REFWIDENED=3:189968301-189968307;PctSeqSimilarity=0.9232;PctSizeSimilarity=0.9259;PctRecOverlap=0;SizeDiff=-8;StartDistance=-123;EndDistance=-123;GTMatch=0;TruScore=61;MatchId=3884.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:33:0|1:44:4:0:25:./.:0:0:0:0:0/1:4:21:./.:.:.:.:.:.
chr4	701698	HG3_PB_SVrefine2Falcon1Dovetail_2564	CTG	TGGGGGCCGGGACCCTGAGACAGCTCTGTTTTCACCGGGGGCCGGGACCCTGAGACAGCTCTGTTTTCCCCTGGGGGTCGGGACCCTGGGACAGCCCTGTTTTCCCCTGGGGGTCGGGACCCTGGGACAGCCCTGTTTTCACCTGGGGTCGGGACCCTGAGACAGCCCTGTTTTCCCCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2564:HG2_PB_SVrefine2Falcon1plusDovetail_8478:HG4_PB_SVrefine2Falcon1Dovetail_2493:HG3_PB_assemblyticsfalcon_18725;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2564:HG3_PB_assemblyticsfalcon_18725;NumExactMatchSVs=2;ClusterMaxShiftDist=0.022409;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.112045;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=176;DistBack=32;DistForward=13;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=697;REFWIDENED=4:701239-701935;PctSeqSimilarity=0.9723;PctSizeSimilarity=0.9617;PctRecOverlap=0;SizeDiff=-7;StartDistance=378;EndDistance=380;GTMatch=0;TruScore=64;MatchId=3907.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:0|1:26:2:2:13:./.:0:0:0:0:0/0:24:1:./.:.:.:.:.:.
chr4	1320846	HG2_PB_pbsv_4105	G	GCACCAGCAGCAACCCCCACATGTGGTCCCTGTCTCCTCCCCGCTCTGCCGACCTGGGGTCCTGCCTGCTCCAAGCTTGCTTCTCTGCCTCATGCCCCTGCTGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1927:HG2_PB_pbsv_4105:HG2_PB_HySA_7717:HG2_10X_SVrefine210Xhap12_3046;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_4105;NumExactMatchSVs=1;ClusterMaxShiftDist=0.101382;ClusterMaxSizeDiff=0.101382;ClusterMaxEditDist=0.155963;PBcalls=3;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=103;DistBack=7393;DistForward=29;DistMin=29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=212;REFWIDENED=4:1320676-1320887;PctSeqSimilarity=0.9855;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=137;EndDistance=137;GTMatch=0;TruScore=66;MatchId=3915.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:27:./.:0:0:3:6:./.:0:0:0:0:0/0:55:1:./.:.:.:.:.:.
chr4	1626573	HG2_PB_SVrefine2Falcon1plusDovetail_8512	C	CATCAGAAGGTCCTATGTCCCGGCCCACGTGGTCAGGGGTCACACCAGGTGATCAGAAGCCCCCACGTCCCGGCCCACGTGGTCAGGGTCACGCCAAGTGATCAGAAGCCCCCACGTCCCGGCCCACGTGGTCAGGGGTCACACCAGGTGATCAGAAGGCCCACGTCCCAGCCCACGTGGTCAGGGTCACGCCAGGTGAAGGCCCCACGTCCCAGCCCACGTGGTCAGGGTCACGCCAGGTGATCAGAAGCCCCACGTCCCGGCCCACGTGGTCAGGGGTCACGCCAGGTGATCAGAAGGCCCCACGTCCCGACACACGTGGTCAGGGGTCACACCAGGTGATCAGAAGGCCCCACGTCCCGGCCCACGTGGTCAGGGTCACGCCAGGTGATCAGAAGGCCCCACGTCCCGACCCACGTGGTCAGGGGTCACACCAGGTGATCAGAAGGCCCACGTCCCGGCCCAGTGGTCAGGGTCACACCAGGTGATCAGAAGGCCCCACGTCCCGGCCCACGTGGTCAGGGTCACGCCAGGTGATCAGAAGGCCCCACGTCCCGACCCACGTGGTCAGGGGTCACACCAGGTGATCAGAAGGCCCCACGTCCCGGCCCACGTGGTCAGGGGTCACACCAGGTGATCAGAAGGCCCCACGTCCCGACCCACGTGGTCAGGGGTCACACCAGGTGATCAGAAGGCCCCACGTCCCAGCCCACGTGGTCAGGGTCACGCCAGGTGATCAGAAGGCCCCACGTCCCGGCCCACGTGGTCAGGGTCACGCCAGGTGATCAGAAGGCCCCACGTCCCGACCCACGTGGTCAGGGGTCACACCAGGTGATCAGAAGCCCCCACGTCCCGGCCCAGGTGGTCAGGGGTCACACCAGGTGATCAGAAGGCCCCACGTCCCGGCCCACGTGGTCAGGGGTCACACCAGGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8512:HG4_PB_pbsv_4155:HG3_PB_SVrefine2Falcon1Dovetail_2602:HG2_PB_SVrefine2PB10Xhap12_3040;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8512;NumExactMatchSVs=1;ClusterMaxShiftDist=0.172249;ClusterMaxSizeDiff=0.171186;ClusterMaxEditDist=0.259436;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=933;DistBack=7751;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=987;REFWIDENED=4:1626574-1627560;PctSeqSimilarity=0.98;PctSizeSimilarity=0.9883;PctRecOverlap=0.1333;SizeDiff=-11;StartDistance=-813;EndDistance=-813;GTMatch=0;TruScore=70;MatchId=3919.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:29:0|1:17:1:3:19:./.:0:0:0:0:0/0:10:0:0/1:17:12:.:.:.
chr4	1668070	HG2_PB_pbsv_4127	T	TGGCACCCTCCTGATTCTAAAATAAACCTGCCCTGCACCCCGTATCTAAAATAAACCATGGCACC	10	PASS	ClusterIDs=HG2_PB_pbsv_4127:HG2_PB_HySA_7762:HG4_PB_assemblyticsfalcon_18492:HG2_PB_assemblyticsfalcon_18877:HG4_PB_pbsv_4156;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_4127;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.281481;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=64;DistBack=44;DistForward=95;DistMin=44;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=528;REFWIDENED=4:1667638-1668165;PctSeqSimilarity=0.9522;PctSizeSimilarity=0.9697;PctRecOverlap=0;SizeDiff=-2;StartDistance=70;EndDistance=70;GTMatch=0;TruScore=64;MatchId=3920.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:37:1/1:3:12:2:13:./.:0:0:0:0:0/0:9:0:./.:.:.:.:.:.
chr4	10133272	HG2_PB_SVrefine2PB10Xhap12_3132	T	CCCAGTGACTGACGTGGACTCTCCCCAGTGACTGACGTGGACTCTCCCCAGTGACTGACGTGGACTCTCCCCAGTGACTGACGTGGACTCTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8592:HG2_PB_PB10Xdip_21176:HG2_PB_SVrefine2PBcRplusDovetail_7975:HG2_PB_SVrefine2PB10Xhap12_3132:HG4_PB_SVrefine2Falcon1Dovetail_2600:HG2_PB_pbsv_4251:HG3_PB_pbsv_4145:HG3_PB_SVrefine2Falcon1Dovetail_2671;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3132:HG2_PB_SVrefine2PBcRplusDovetail_7975;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0543478;ClusterMaxSizeDiff=0.0430108;ClusterMaxEditDist=0.180851;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=92;DistBack=-13916;DistForward=-1;DistMin=-13916;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=4:10133271-10133273;PctSeqSimilarity=0.9979;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=140;EndDistance=140;GTMatch=0;TruScore=66;MatchId=3941.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:54:./.:2:38:18:6:./.:0:0:0:0:./.:4:1:./.:.:.:.:.:.
chr4	20473845	HG2_PB_SVrefine2PB10Xhap12_3175	G	GTATATATATATAGATCTATATATCTATATATAGATATATATCTATATATCTATATATAGATATATATCTATATATCTATATATATAGATATATATCTATATATCGATATATAGATATATATCTATATATAGATATATAGATATATATCTATATATAGATCTATATATAGATATAGATATCTATATAGATATCTATATCTATATATATATATCTATATATATAGATATATAGATATCTATATCTATATATATAGA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8634:HG2_PB_SVrefine2Falcon2Bionano_2073:HG2_PB_SVrefine2PBcRplusDovetail_8012:HG4_PB_SVrefine2Falcon1Dovetail_2644:HG4_PB_SVrefine2PBcRDovetail_2208:HG4_Ill_SVrefine2DISCOVARDovetail_3269:HG2_PB_SVrefine2PB10Xhap12_3175;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3175:HG4_Ill_SVrefine2DISCOVARDovetail_3269:HG4_PB_SVrefine2PBcRDovetail_2208;NumExactMatchSVs=3;ClusterMaxShiftDist=0.107438;ClusterMaxSizeDiff=0.107438;ClusterMaxEditDist=0.107438;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=254;DistBack=8751;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=291;REFWIDENED=4:20473846-20474136;PctSeqSimilarity=0.8968;PctSizeSimilarity=0.7638;PctRecOverlap=0;SizeDiff=60;StartDistance=-332;EndDistance=-332;GTMatch=1;TruScore=55;MatchId=3963.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:76:1/1:6:43:2:19:./.:0:0:0:0:0/1:10:17:./.:.:.:.:.:.
chr4	99813787	HG3_PB_SVrefine2Falcon1Dovetail_2933	T	TGTGCCACAGCACTCCAGCCAGGGCAACAGAGGGAAACTCTGTCTCAAAAAAAAAAAAAAAAAAGAAGGCGAGAAACAGGTTGGCTGATATTTCTCAGAGGAACAAATTAGCCAAGAAGAAATGAGAGTGCCAGGAGTGGGGAAACTATTAAATGTGATTCTATATTTAATCAAATACCTAACTGGGAAAATAATAAAGATTGAGTAATGCTGCATAGATATGTTCTGAAATAATGTATACCAGTTTTAATATATCTGTATATACTTCTCTTAAAATAGTTTTATTCCTACATAATACATAATAGCTTATATATACCTAACATATTATATATAGAGGCATACCTTGGATATATTGTGAGTCCAGTTCCAGATCATCATAATAAAGTGAGTATCACAATAAAGGAACTATCTTTAAGGAGAGTCACACAAATTTTTTGGTTTCCCGGTGCATGTAAAAGTTACGTTTACACTATACTGTAGTCTACATTATGTCTGAAATAGCATTACATCTAAAAAAAATGTACATACCTTAATTAAAAATTCTATTGCTAAAAATGCTAACGATCATCTGAGCCTACAAAGAGTGGTAATCTTGCTGATGGAGGGTCTTCCCTTGTTTGCTGCTGACTGATCAGAGTAGTGGTTGCTGAAGATTGGGGTGGCTGTGGCAATTTCTTAAGACAACAACGAAGTCTGTCACACTGATTGACTCTTCATTTCACAAAAGATTTCTCTGTAGCATGCAATGCTGTTTGTAAGCATTTTACATAGTAGAATTTCTTTCAAAATTGGAGTCAATCCTCCCAAACCCTGCAGTTGCTTTATCAATTTGGTTTATGTAATATTCAAATCCTTTGTTGTCACTTCAACAATGTTCACAGCATCTTCACCAGGAATAGATTCCATCTCAAGAAACCTTTTTTTCTGCTCACCCATAAGAAGCAACACCTTATCCATTCAAGTTTTCTCATGAGACTGCAACAATTCAGTAACATCTTCAGGCTCCATTTCTTACTGTTGGTCTCTTGCTCTCTGCACATCTGCAGTTACTTCTTCCACTAAAGTCTTGAACGCTTCAAAGTCATCAATACGGGTTGGAATCAAATTCTTCCTAACTCTTGTTCATGTTGATATTCTGACCTCCCATGAATCATGAATGTTCTTAATGACATCCAGAATGCTCAATCCTTTCGGAAGGTTTTCCATTTACTTTGTCCAGATCCATCAAAGGAATCACTATCTACAGCATTTAGCCTCATGAAATATAGTTCTTATTAATAAATAATAAGGCTTGAAAGTCAAAATTCCTCTTTGCTGCTCCATACGCTGCAGAAAGTACACTGTGTTAAGAGGCATGAAAACAATTCATCTCTGTCAGAGCTCTTGGGCGACTAGGCGCATCATCAAGGAGCAGTGATATTTTGAAAGGAAACTTTTTTTCTGGGCAGTAGGTTTCAACAGTAGGCTTAAAGTATTCAGTAAACCATGCTATAAATCGATGCACTGTCATCCAGGCTTTGTTGCTCCATTTCTAGAGCATGGGCAGAGTGGATTTAGCATCATTCTTCAGGATTCTTAAGATTTTGGGAATGGCAAATGAGCACTGGCTTCAACTTAAAGTCATTGGCTGCAAGATCCCCTAACAAGAGTCAGCCTGTCCTTTGTAGCTTTGAAGCTAGGCAATGACTTCTCTCTAACTAGCAAAGTCCTAGAAGATGGCATCTTCTTCCAGTAGAAGGCTGTTTCGTTTACACTGAAAATCTGTTTTTAGTGTAAACTTCCTTCATCAATTACCTCAGCTAGATCTGGAGATTTTGCTGCAATTTCTATATCAGCCCTTGCTGCTTCACCTTGTACTTTTATGGGGGTGACTTTCCTTATACCTTATAACTGACCTCTGCCAGCTTTCAACTTTTATTCTGCAGCATCCCCACCTCTCTCAGCCTTCATAACACTGAACAGAGTTAGGGCCTTGCTATGGATTAGGCTTTGTCATAAGGGAATGTTGTAGCTGGTTTTATTTACTACCCAGACCACTTGAACTTACTCTATATCAGCAATAAGGCTGTTTTGTTTTCTTATCATTCATGTGTTTGCTGGAGGAGGACTTTCGATCTCCTTCAAGAATTTTTCCTTTGCTTTCACAACCTGGCTAACTTATTTGGTACAACAGACCTAGCTTTTGGCCTGTGTTGGCTTTTGACATGTCTTCCTCGTAAGCGTAATCATTTCAAGCTTTTGATTTAAAGTGAGAGACATGCAACTCTTCCTTTCACTATAACATGTAGAGGCCACTGTAGGGCTATTAATTGGCTTAATTTCAACATTGTTGTGTCTCAGGGAATAGGCAGGCCCAAGGACAAGAAGATGAGAATGGCCAGTCAGTGGAGCAGTCAGAACACATACAACATTTATCAATTAAGTTTGCCATCTTATATGGCCAATGTTCATGGCACCCCAAAACAATTATAATAGCAACATCAAAGATCACTGATCACAGATCATAACAGATACAATAAAAGTTTGAAATATCGTGAGAATTACCGAAATGTGACACAGAAACACCAAGTGAGCACATGCCATTGGAAACATGGCATCAACAGAACTGCTTGACACAGGATTTCCACAAACCTTCAATTTATAGAAAAGGCATGATTTGTGAAGCACAGTAAAATGAGGTACGCCTGTATAATATTTTCTCTAATGCCTTGAAGATAAACTCGTGGAACATTAAAGTTACACTTAAATGTTATTATCCCAAGATGATTCTCCTTTAGAAGAATTAAACTGAATATTCTCTGAATTACAATACCAAAGGGCAGTCAAAGGGAAATTTCATTTTCTCATCAACACGAATGTTGTCTGAAGAGCCTTCCAAATTGAATATATATTTCATAATCCTATAATTAATGCTTGGTAACTTCACCTAGACAGAAAAATGAGATGCATTTCAACATGTACTTGATAATTTGTCAGCAACTGCCACCCCATTATCAATAAAAAAGAAGAAGAAAAGGCAAGAAAACCACCAACGAGGTCAAGTATACATGCTGGATTTTTAAAAATAATTCAATCTTTTTTCAAAACAAAAACCTCTGCACCCAGCCATTTAAACACATAAAGATCTATGGGGCCAGGAAAGGTGGATCATACCAGTAATAACAGCATTTTAGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGCTCAAGACTAGCCTGGACAACAAAGTGAGACCTCATCTCTACTAGACATTTAAAAAATTAGCCAGGCATGGGCTGGGCGCAGTGGCTCACGCCCGTAATCCCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2282:HG3_PB_pbsv_4626:HG3_PB_HySA_7301:HG4_PB_pbsv_4771:HG2_PB_HySA_8897:HG4_PB_HySA_7091:HG2_PB_PB10Xdip_22782:HG2_Ill_tnscope_524:HG4_PB_SVrefine2PBcRDovetail_2427:HG2_PB_SVrefine2PB10Xhap12_3446:HG2_PB_SVrefine2PBcRplusDovetail_8254:HG4_PB_SVrefine2Falcon1Dovetail_2904:HG3_PB_SVrefine2PBcRDovetail_2162:HG3_PB_SVrefine2Falcon1Dovetail_2933;NumClusterSVs=14;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2933:HG3_PB_SVrefine2PBcRDovetail_2162;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0638581;ClusterMaxSizeDiff=0.0635625;ClusterMaxEditDist=0.239697;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=3310;DistBack=-3312;DistForward=24478;DistMin=-3312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3313;REFWIDENED=4:99813788-99817100;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4092.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:./.:18:83:./.:6:15:9:19:./.:0:0:0:0:./.:1:12:0/1:44:90:.:.:.
chr4	126487557	HG2_10X_SVrefine210Xhap12_3566	T	TGGGGTACTTGCCCCTCCTCTAGAAAAGCGGGACTTGCCGCCAAGAGTGAAGGAGAAGGGGTTGA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3566:HG4_PB_pbsv_4893:HG2_PB_pbsv_4860:HG2_PB_HySA_9142:HG2_PB_PB10Xdip_21360:HG4_Ill_GATKHCSBGrefine_3430:HG3_Ill_Spiral_5356:HG3_Ill_GATKHCSBGrefine_3273:HG2_Ill_GATKHCSBGrefine_3290:HG4_PB_HySA_7272:HG4_Ill_SVrefine2DISCOVARDovetail_3734:HG2_PB_SVrefine2PBcRplusDovetail_8341:HG2_PB_SVrefine2PB10Xhap12_3545:HG3_PB_pbsv_4740;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3566:HG4_Ill_SVrefine2DISCOVARDovetail_3734:HG2_PB_SVrefine2PBcRplusDovetail_8341:HG2_PB_SVrefine2PB10Xhap12_3545;NumExactMatchSVs=4;ClusterMaxShiftDist=0.144;ClusterMaxSizeDiff=0.141732;ClusterMaxEditDist=0.290323;PBcalls=8;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=64;DistBack=6552;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=153;REFWIDENED=4:126487558-126487710;PctSeqSimilarity=0.9716;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-76;EndDistance=-76;GTMatch=0;TruScore=65;MatchId=4132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:33:1/1:1:11:1:12:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr4	151581502	HG2_PB_SVrefine2PB10Xhap12_3630	G	GGGGGTGTCAGCCCCACGCCCGGCCAGCCGCCTCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3038:HG2_PB_assemblyticsPBcR_19563:HG2_PB_assemblyticsfalcon_20218:HG2_PB_SVrefine2PBcRplusDovetail_8402:HG2_PB_SVrefine2PB10Xhap12_3630:HG2_PB_SVrefine2Falcon2Bionano_2407:HG2_PB_SVrefine2Falcon1plusDovetail_9034:HG3_PB_HySA_7704:HG3_PB_SVrefine2PBcRDovetail_2275:HG2_PB_SVrefine2PB10Xhap12_3629:HG2_PB_pbsv_4985:HG3_PB_pbsv_4847:HG4_PB_pbsv_5019:HG2_PB_PB10Xdip_21592:HG2_PB_HySA_9398:HG3_PB_SVrefine2Falcon1Dovetail_3086;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2407:HG2_PB_SVrefine2PB10Xhap12_3630:HG2_PB_SVrefine2PBcRplusDovetail_8402;NumExactMatchSVs=3;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.319588;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=97;DistBack=-47;DistForward=25036;DistMin=-47;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=142;REFWIDENED=4:151581365-151581506;PctSeqSimilarity=0.9739;PctSizeSimilarity=0.9898;PctRecOverlap=0;SizeDiff=-1;StartDistance=112;EndDistance=112;GTMatch=0;TruScore=65;MatchId=4169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:44:1/1:4:20:0:9:./.:0:0:0:0:1/1:0:20:./.:.:.:.:.:.
chr4	154050407	HG2_PB_SVrefine2PBcRplusDovetail_8408	C	CCACCACCATCACCACCACCACTACCACCATCACCACAACTGCCACCATTACCCCCACCACCACTACTGTCACCACTGCCATCACCACCATCAGCATCACCACCATTACCACCACCACCAACATACCACTACCTCCACCATAACAACTACCACCACCACCATCACCACCACCATACCACTACCACCATCACCACCACCACCATCACCACCACCACCACCATCACCACCACCACCACCAGCATCACCACCATCACCACCACCACCACCATCACCACCATCACCACCACCATCACCACCATCACCACCACCACCACCATCATCACCATTACCACCATCACCACCCCCACCACCACCACCACCATCACCACCACCACCATCACCACTACCACCACCAGCATCACCATCACCACCACCTTCACCACCACCATCACCATCACCAACATCACCACCCCCCCACCACCATCAACACCATCACCACCACCATCACTACCATCACCACCATCACCAACACCACCATCACCATTACCACCATCACCACCCCCACCACCACCATCACCACCATGTCACTATCACTACCACCACCACCACCACCACTACCATCACCACCATCACCACCACCACCACCACCACCACCATCACCATCACCACCATATCACTACCACCACCACCACCACTACCATCACCACCATCACCACCCCACCACCACCATCAACACCATCACCACCACCATCACCACCACCACCATCACCATTACCACCATCACCACCCCCACCACCACCATCACCACCATATCACTATCACTACCACCACCACCACCACCACTACCATCACCACCATCACCACACCACCACCACCACCACCATCACCATCACCACCATATCACTACCACCACCACCACCACTACCATCACCACCATCACCACCCCCACCACCATCAACACCATCACCACCACCATCACCACCACCACCATCACCATCACCACCATATCACTACCACCATCAGCACCACTACCAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2414:HG2_PB_SVrefine2PBcRplusDovetail_8408:HG2_PB_SVrefine2PB10Xhap12_3636;NumClusterSVs=3;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_8408;NumExactMatchSVs=1;ClusterMaxShiftDist=0.016907;ClusterMaxSizeDiff=0.016907;ClusterMaxEditDist=0.0297915;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1013;DistBack=36799;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=822;REFWIDENED=4:154050408-154051229;PctSeqSimilarity=0.9332;PctSizeSimilarity=0.9615;PctRecOverlap=0.0948;SizeDiff=39;StartDistance=-898;EndDistance=-898;GTMatch=0;TruScore=66;MatchId=4175.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:13:36:./.:16:5:0:25:./.:6:138:68:53:0/1:7:6:0/1:14:117:.:1023:.
chr4	161581870	HG2_PB_SVrefine2Falcon2Bionano_2446	C	CTTATATGAGGACATTATTAGATTCCATTGCTCATGGACATAGACTCATTCCTTATGATTGGGAGATTCTGGCAAAATCGTCTCTCTTACCCTCTCAATTTTTACAATTTAAGACTTGGTGGATTGATGGGGTACAAGAACAGGTCCGAAGAAATAGGGCTGCCAATCCTCCAGTTAACATAGATGCAGATCAACTATTAGGAATAGAACAAAATGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTGCTTTTCCCCACA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3117:HG2_PB_PB10Xdip_21652:HG4_PB_pbsv_5075:HG2_PB_HySA_9509:HG2_PB_pbsv_5045:HG4_PB_SVrefine2Falcon1Dovetail_3077:HG4_PB_SVrefine2PBcRDovetail_2574:HG2_PB_SVrefine2PBcRplusDovetail_8435:HG2_PB_SVrefine2PB10Xhap12_3668:HG2_PB_SVrefine2Falcon2Bionano_2446:HG2_PB_SVrefine2Falcon1plusDovetail_9068;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2446:HG2_PB_SVrefine2PB10Xhap12_3668:HG2_PB_SVrefine2PBcRplusDovetail_8435:HG4_PB_SVrefine2PBcRDovetail_2574;NumExactMatchSVs=4;ClusterMaxShiftDist=0.106346;ClusterMaxSizeDiff=0.106346;ClusterMaxEditDist=0.237856;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=284;DistBack=28408;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=568;REFWIDENED=4:161581871-161582438;PctSeqSimilarity=0.9975;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-319;EndDistance=-319;GTMatch=0;TruScore=66;MatchId=4193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:30:./.:16:6:1:9:./.:0:0:0:0:0/1:3:5:./.:.:.:.:.:.
chr4	168845183	HG2_Ill_250bpfermikitraw_7187	T	TTCCACGCCCCGACCTCATATCTCTGCACCCCAACCTCTTCTCTGCTTTTCTGGAGGGCAAGAACCCCCA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_7187:HG2_PB_pbsv_5095:HG3_Ill_250bpfermikitraw_6960:HG3_PB_pbsv_4958:HG2_Ill_Krunchall_7355;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7187:HG3_Ill_250bpfermikitraw_6960:HG2_Ill_Krunchall_7355;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0972222;ClusterMaxSizeDiff=0.0699301;ClusterMaxEditDist=0.223776;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=69;DistBack=110;DistForward=81170;DistMin=110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=4:168845184-168845251;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9855;PctRecOverlap=0;SizeDiff=1;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=65;MatchId=4206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:18:0|1:29:3:0:12:./.:0:0:0:0:0/1:14:10:./.:.:.:.:.:.
chr4	189118151	HG2_PB_SVrefine2Falcon1plusDovetail_9217	A	ATCCATCCCCTTCCCCCTCCCCACCCACCTGCTGAGTGCTACTTCCTCCACTCAATCCCACTCCATCCCCTTCCCACTCCCCCCCACCTGCTGAGAGCTACTTCCTCCACTCAATCCCACTCCACCCCCTTCTCACTCCCCACCCACCTGCTGAGAGCTACTTCCTCCATTCAATCCCACCCCATCCCCTTCCCCTCCCCACCCACCTGCTGAGAGCTACTTCCTCCATTCAATCCCACTCCATCCCCTTCTCACTCCCCACCCACCTGCTGAGAGCTACTTCCTCCATTCAATCCCACTCCATCCCCTTCTCACTCCCCACCCACCTGCTGAGAGCTACTACCTCCATTCAATCCCACCCATCCCCTTCCCCCTCCCACCCACCTGCTGAGAGCTACTTCCTCCATTCAATCCCACCCCATCCCCTTCCCCTCCCCACCCACCTGCTGAGAGCTACTTCCTCCATTCAATCCCACTCCACTTCCCCACCCACCTGCTGAGAGCTACTTCCTCCATTCAATCCCACTCCATCCCCTTCCCACTCCCCACCCACCTGCTGAGAGCTACTTCCTCCATTCAATCCCAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2584:HG2_PB_SVrefine2Falcon1plusDovetail_9217:HG2_PB_SVrefine2PBcRplusDovetail_8569;NumClusterSVs=3;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9217;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0252738;ClusterMaxSizeDiff=0.0252738;ClusterMaxEditDist=0.0252738;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=585;DistBack=3494;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=485;REFWIDENED=4:189118152-189118636;PctSeqSimilarity=0.9761;PctSizeSimilarity=0.9799;PctRecOverlap=0;SizeDiff=-12;StartDistance=-601;EndDistance=-601;GTMatch=0;TruScore=65;MatchId=4265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:0|1:25:0:1:15:./.:11:5:7:11:./.:5:1:0/1:4:7:.:798:.
chr4	190411706	HG4_PB_SVrefine2Falcon1Dovetail_3255	T	TGCTGACCCTCGGTGGTGTGGGTGGGCTGTGGCTGACCTCACTCGGTGTGGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGATGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGGTGGGCTGTGGCTGACCCTCACTGGTGTAGGTGGGCTTGGCTGACCCTACTGGTGTAGGTGGGCTGTGGCTGACCCTCATTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTAGGTGGCTGTGGCTCACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGAGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGCTGGGCTGTGGCTGACCCTCGGTGGTGTGGGTGGGCTGGGCTCACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCGATGGTGTAGGTGGGCTGTGGCTGACCCTCACTGGTGTAAGGTGGGCTGTGGCTGACCCTCATTGGTGTGGGTGCGGGCTGTGGCTGACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCACTGGTCTGGGTGAGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGCTGGGCTGTGGCTGACCCTCGGTGGTGGGGTGGGCTGTGGCTCACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCGATGGTGTAGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGAGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTCACCCTCGGTGGTGTAGCTGGGCTGTGGCTGACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCGGTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTAGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTTGCTGGCCCTCACTGGTGTAGGTGGGCTGTGGCTTGCCCTCACTGGGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGGCCCTCACTGGTGTGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGGTGGGCTATGGCTGACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCACTGGTGTAGGTGGGCTGTCGCTGGCCCTCACTGGTGTAGGTGGGCTGTGGCTTGCCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTAGGTGGGCTGTCGCTGGCCTCACTGGTGTAGGTGGGCTGTGGCTTGCCCTCACTGGTGTAGGTGGGCTATGGCTGACCCTCACTGGTGTAGGTGGGCTGTCGCTGGCCCTCACTGGTGTAGGTGGCGCTGTGGCTTGCCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGGCCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGGTGGGCTATGGCTGACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCGGTGGTGTTGGGTGGGCTGTGGCTGACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGGTGAGCTGTGGCTGACCCTCACTGGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTCACCCTCGGTGGTGTAGCTGGGCTGTGGCTGACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGGTGAGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTATGGCTGACCCTCGGTGGTGTAGGTGAGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGGTGAGCTGTGGCTGACCCTCACTGGTGTAGGTGGGCTGTGGCTGACCCTCGGTGGTGTGGGTGGGCTGTGGCTGGCCCTCACCGGTGTGGGTGGGCTGTGGCTGGCCCTCACCGGTGTGGGTGGGCTGTGGCTGACCCTCACCGTGTGGGTGGGCTGTGGCTGACCCTCACCGGTGTGGGTGGGCTGTGGCTCACCCTCGGTGGTGTAGCTGGGCTGTGGCTGACCCTCACCGGTGTGGGTGGGCTGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8604:HG4_PB_SVrefine2Falcon1Dovetail_3255:HG2_PB_SVrefine2Falcon1plusDovetail_9262;NumClusterSVs=3;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_3255;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0977495;ClusterMaxSizeDiff=0.0977495;ClusterMaxEditDist=0.225114;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=2306;DistBack=6062;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1501;REFWIDENED=4:190411707-190413207;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4275.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:47:0|1:21:1:1:25:./.:16:0:1:1:0/0:14:0:0/1:63:50:.:2495:.
chr5	391883	HG2_PB_pbsv_5408	G	GCGGCAGGCGAGGGCGGCGCAGGTGAGCATGGCCAGGGAGCGCTGCACGGACAACAGGGCGAGGAGGGCGCAGGGTGAGGCAGGGCCAGAGCGTGCATGGGGGCAGGGCCGAGGAGGCGCAGGGTGAGGCAGGGCCAGAGCGTGCAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3894:HG2_PB_HySA_10038:HG2_PB_pbsv_5408:HG2_PB_SVrefine2Falcon2Bionano_2647:HG4_PB_pbsv_5426;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_5408;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0469799;ClusterMaxSizeDiff=0.0268456;ClusterMaxEditDist=0.261745;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=146;DistBack=3;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=3357;REFWIDENED=5:391424-394742;PctSeqSimilarity=0.954;PctSizeSimilarity=0.9932;PctRecOverlap=0;SizeDiff=-1;StartDistance=244;EndDistance=244;GTMatch=0;TruScore=64;MatchId=4283.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:27:./.:7:12:7:6:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr5	1191347	HG2_PB_SVrefine2PB10Xhap12_3950	T	TGTCATGAGGGGAGGAAAGGCTGAGGAGCAGGGGAGATGTCATGGGGGGAGGAAAGGCTGAGGAGCAGGGGAGATGTCATGGGGGGAGGAAAGGCTGAGGAGTAGGGGAGATGTCATGGGTGGAGGAAAGGCTGAGGAGTGAGGGAGACGTCACGGGGGGAGGAAAGGCTGAGGAGTAGGGGAGACGTCATGAGGGGAGGAAAGGCTGAGGAGTGGGGGAGACGTCATGGGGGGAGGAAAGGCTGAGGAGTGGGGGAGAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9342:HG4_PB_SVrefine2PBcRDovetail_2778:HG2_PB_SVrefine2PBcRplusDovetail_8689:HG2_PB_SVrefine2PB10Xhap12_3950:HG2_PB_SVrefine2Falcon2Bionano_2686:HG3_PB_SVrefine2Falcon1Dovetail_3385;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2686:HG2_PB_SVrefine2PB10Xhap12_3950:HG2_PB_SVrefine2PBcRplusDovetail_8689:HG4_PB_SVrefine2PBcRDovetail_2778;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0233463;ClusterMaxSizeDiff=0.0233463;ClusterMaxEditDist=0.0233463;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=259;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1050;REFWIDENED=5:1191348-1192397;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4288.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:34:./.:0:1:0:0:./.:0:0:0:0:./.:0:2:./.:.:.:.:.:.
chr5	3383746	HG2_PB_SVrefine2PB10Xhap12_4006	A	AGGGACTACAGGCGCCCGCCACCACGCCTGGCTAATTTTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCCGACCTCGCGATCTGCCCGCCTCGGCCCCACAAAGTGCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3435:HG2_PB_SVrefine2Falcon2Bionano_2723:HG2_PB_pbsv_5535:HG2_PB_PB10Xdip_23940:HG3_PB_HySA_8433:HG2_PB_PB10Xdip_23939:HG4_PB_pbsv_5558:HG4_PB_HySA_8204:HG3_PB_pbsv_5383:HG2_PB_HySA_10206:HG4_PB_SVrefine2PBcRDovetail_2806:HG4_PB_SVrefine2Falcon1Dovetail_3368:HG2_PB_SVrefine2PBcRplusDovetail_8735:HG2_PB_SVrefine2PB10Xhap12_4006:HG2_PB_SVrefine2Falcon1plusDovetail_9388;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9388:HG2_PB_SVrefine2PB10Xhap12_4006:HG2_PB_SVrefine2PBcRplusDovetail_8735;NumExactMatchSVs=3;ClusterMaxShiftDist=0.190813;ClusterMaxSizeDiff=0.190813;ClusterMaxEditDist=0.34629;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=143;DistBack=1705;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=605;REFWIDENED=5:3383747-3384351;PctSeqSimilarity=0.986;PctSizeSimilarity=0.9931;PctRecOverlap=0;SizeDiff=-1;StartDistance=-177;EndDistance=-177;GTMatch=0;TruScore=65;MatchId=4300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:67:1/1:3:25:5:31:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr5	11120343	HG2_PB_SVrefine2Falcon2Bionano_2762	A	AGACTTCAAGAGGGGGTTATCATGCTGTCTGCAGGGGTGATGAGGCTCAGTATACATATAGACTTCAAGAGGGGGTTATCATACTGTCTGAAGGGGTGATGAGGCTCAGTATACATATAGACTTCAAGAGGGGGTTATTATACTGTCTGCAGGCATGGTGAGGCTCAGTATACATACG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10169:HG3_Ill_GATKHCSBGrefine_3719:HG3_PB_pbsv_5438:HG4_PB_SVrefine2Falcon1Dovetail_3417:HG2_Ill_GATKHCSBGrefine_3839:HG3_PB_HySA_8544:HG2_PB_HySA_10346:HG2_PB_PB10Xdip_22898:HG2_PB_PB10Xdip_22897:HG2_Ill_breakscan11_3546:HG4_PB_pbsv_5630:HG2_PB_pbsv_5598:HG3_PB_SVrefine2PBcRDovetail_2582:HG3_PB_SVrefine2Falcon1Dovetail_3481:HG3_Ill_SVrefine2DISCOVARDovetail_4229:HG2_PB_SVrefine2PBcRplusDovetail_8779:HG2_PB_SVrefine2PB10Xhap12_4065:HG2_PB_SVrefine2Falcon2Bionano_2762:HG2_PB_SVrefine2Falcon1plusDovetail_9431;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10169:HG3_PB_SVrefine2PBcRDovetail_2582:HG3_PB_SVrefine2Falcon1Dovetail_3481:HG3_Ill_SVrefine2DISCOVARDovetail_4229:HG2_PB_SVrefine2PBcRplusDovetail_8779:HG2_PB_SVrefine2PB10Xhap12_4065:HG2_PB_SVrefine2Falcon2Bionano_2762:HG2_PB_SVrefine2Falcon1plusDovetail_9431;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0883978;ClusterMaxSizeDiff=0.0773481;ClusterMaxEditDist=0.338798;PBcalls=14;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=177;DistBack=-114;DistForward=-1;DistMin=-114;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=506;REFWIDENED=5:11120344-11120849;PctSeqSimilarity=0.973;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-433;EndDistance=-433;GTMatch=0;TruScore=65;MatchId=4322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:71:1/1:3:19:2:16:./.:0:0:0:0:0/1:8:1:./.:.:.:.:.:.
chr5	94548271	HG2_PB_SVrefine2PB10Xhap12_4336	G	GAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACACAAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGAAAAAATTCAACAACCCTTCATGTTAAAAACTCTCAATAAATTAGGTATTCACGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAATTCTGGTCAGGTCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAGTTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAGTGCACAAAATCACAAGCATTGTTATACACCAGTAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAAGGACGTGAAAGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAGAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAAGTTGTAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAAACAAAAAAGAGCCTGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAATGGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTACTTCAAGGTGGATTAAAGACTTAAACGTTAGACCTAAAATCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACCACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTGGCAACCTACTCATTTGACAAAGGGCTAATATCCAGAATCTACAAAGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCTACAAGTAGGTGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAGACACATGAAAAAATGCTCATCATCTCTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTTTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTACAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAACGTGGCACGTACACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATCGGAAATCATCATTCTCAGTAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGATGGGAACTGAACAATGAGAACACATGGACACGGGAAGGGGAACATCACATTCTGGGGACTGTTGTGGGGTGGGGGGAGGGGGGGAGGGATAGCATTAGGAGATATACCTAATGCTAGATGACAAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTATAATAATATTTAAAAAAAAAAGAAGCTCTTTTGAATACTGCCTCTACTCCAAGGACTCAGTCAAAATGAATGCTACGTTTCTTAATCATTCTAATTTATTTTACCTCTCTTACTTGTTTTACCCATACTTATCCTATAGTTAACATATATGGGTATCTCCCCACCAGATTACAATCTGTCATTTTTTTAATTCTGTACAGTTCTTGGCATAGAAATGCTTTGCAAATTCTTACTGAACTTTGGCAACTCCAGCTGAAAAGCATTTGAATTAAAACATAAAAATCACTATACTGACAGGTAACATATGACATTTTACAACATCAGATTGACTTCTGGCAAAAAAAAGAAAATTGGCTTTTTACGTTTATTTCTAGATTAAATGTCTAGTGTAGTAGAAGTTATAAGGAAGTAAGCATATCTTAATAAAAATTCTGAACACTAATTTATAGTTAATAAAGCAAACAATAAAAGTGTTTAATTGCTTTCATTTTTAATCACAGTACAAAAAAGTTGTAGCTATCTTTATTCTACTTGCAGATCCTCATATAATCAGAATGAGTTAGTTATAAATACAGAGGTTTGAAGGGGTATAAAGGAAGATCAGTTATGATGCTCTTTATAAAATTCCTAGCTTTGACTCTCAGATACAACCAGTATAATGACCTTGAAGCCTGACTTCGTCAACTCCATTTCCCTAAATGACCTACAATTTCTGACTTGTGTGCTAGGGTTGTTTTCTAGACCTGCCACAGACCCTACAAATATGAATTCAAATTCTATTTTTGCCACTTTGATGCTACAAAAACACTAAGCATTTTTTTAAATAAAATGAGATCAGAAAAAAAATAGTTTGCCAAACTAACTTCCTTTTGTCAAGAAAGCACAAGAAAGTTTTGTAACAGTGCATAAAAATAAAAGAGCACTAAATGTCAAATAAGAACATCCTGTTCTATAATGCTTGACTTTCAAATGTAATAAATTTAGCTTTACCAACCTAAAGGGGGGAAAGGCTAATCATAAGCACTAATTGCCCTTAATTTGAGGCCTTTTGTAAAAATCAAAACCCTCTGCTATATCAAAAAATATTTAAAAGTATCACCTTATAAAATAAAAAAATTATTTAAGTGTGTTAATTTCCTCATCAGTAAATATACATTTATGAATATCAAGACATCAGTGACATAAATTCCATAAATTTTTTTGAGTCAGTGACCATTTGTATTATATTTACTCATAACTCACAACCAGAGGGAGGGGAAATTTGCTCTCCAAAGAAGCAATTCAAGTTAAGGTATTTATTGTAAATTTCACAGCAATTCCCTTTGAATTACATAGAGTTAATTCGTTTGTGATTATCTTTAGTTTTAGTATTTTTGGCACAGAAATAATGTTATTCATCTATCTGTCTACTTTCCAAATAACATACGATCCATAAAATAACAAACCACATTGTTATACAATAATTTTCTCTATGTGTAATAAATGTTAAGGCTTTGTGTGGAATACTAATCTTATTTTCTTATTCAAAAAAATCCAAGCATATTTAACCTTATCATTCATCAATTTATCTCAATACTAAATAAACAACTAGAATATCTGTTCTCTAATATAAAAGTAAATTTTATTGGGTGTTTAATTAATCTCTCAACAAAGCACATTAATTTTTCTAGGATTATTTCAGAACAATAAATAAAACTAAAGAAAATAAAAACCACAAACCAGAGTGTAAATAATGAGCTAACACTGGGAATATTTCATTTTATATTACTTCTAGAGGAAATAATTATCACACAGTAATTTATGCCTAGTAAGTTACATTTTAATTTTAATAAAAAACCTAGAACTCTCCAATAAAATTCTTTCAAGTTCTAAAAGCACATCATAAAACAAATTGAGTACTTCAATATACCAGATGTATCCAAGAGAAACAATTTGTAATACTATAGAGGCAAAAGTTGATCCCTCTCAAGAAAAGATAACAATCTCCTCTTCTCAAAGCAAATAGACTGAATTGATAACTAACTCCTATAGTCAAATAATGTATTCGTACTATAAGCAAAGGAATACCACATATATCTTTTGGTGAAAAGTTGACATAAAAGTAATTATCAACAGTCCAGCACTCTAGAATGCAGAAAACAAATTGGATTCGTGTAGGACATGCTGGAACTACAGCCCCTGAGAACCACTTGTAATACATAATTGATGATTCTTGTAACGCTCCCAATTTTGATATTTGCTAGTGTGGATTAGTGAAATAATTCTTCAAGTAATCACGTTTTTAGAAACTCATTCGATCTCTGCCTGTCTTTTGAAAAAATACTTGGAAAATAAATGATCAATTCAATATAAATTATAAAAAATGTATGTGCCTAGCCACAGCAAATGACAACTTCTCCATGTGTTATTTCTAAGTCCTTCTAGTGGATATTCTTTTTCTGAACCCACAATCACCATAGCTGGTTTTCACTGACATGCTGGGAGTTCACACTAATTAGACCATTTTCCCAGGCAGACTCATATAATCTTCTCAGGACTGTGGAGTGAATTGGTCAGGAGTTGGATATGATTGCCTAAAGCAGAGCCTGGGATAACAATGATTCTTCATTATTATTTAGTAAAACAAGCAGAAGAGAGCAGGAGGAGGGGAGAACGAAGGGGTTATATGAGAAAGGAGGATTTCTCTTGTCCCTTCAACTCCCATCTCATCAATACATCTCATGCCCCTACACATTCCCATCTTGCTGAACTGTGACCTCCAAACGTTCTTTGCCTAACCCAAGGGTAGCTCTAGATACTTCTATCACCCAGTCTCGATCCCTCTTCTCCCCAGAATAAAGCTCCACTAATATTTTAAGGGGTAAGATACTGGAGGTTTGTACCACTCACCCTATACCTTATCCACCTCACCTTGCCAAGGGTCACTGATTCAGACAGAGGTGTGGATCAGCACAGGGAATATTCAAACCCACTGAAGGAAAACACTGTCAACTCACAGAGTTCCATACAAGTCTTTTCCTTCTAAATATCCTTATTCCTATTATAGAGAGGACTTTTTAATGATACAAAACCAAACAAAACAAAATTATATGACCCTAATGATGGCATTTCTTTTGACACTGATTGAGGTCTCTCTACCTTTATTCTTCATCTCAGGCAAGTGCTTGCCCTGAGCTGCGGTGTCAACACCTTCTCTTATAATCAGTGTTTACTTTGCAGCATCCCTGGATCCACTCTGATGAACTATCTAAGGTCGAGTTGGGCTTATGAGGTAATTTTCATCAAATAAATCAAGGAGGTGATTATGCTATCTGTGGTAAACCTGAAAGGTTCATAAGAACAAGGAAGTTGTCACATAATCAGAGTTTTGGGGCCTTTTCACCAAACACATTTCTGATGGACCCCTATAGAACATTCAGATTTTCCTGATAAAAATATAGAAAATCCACTTATATCCTTCCTATCCTAATTATGTTATTAGAGGTTCCATGATTGGAAAAATTGTGATGAGTAATGGGACTAACAAGTACATAAAAGCAGTTTAAGATAATTTGTACTAACTTCAGAGATAATACAGACTTTTATTTTTAAAAAAATATTTTACTATCAGTCCTACAAATGTTCTATTTTGAAACATGAGTAATAATTCAAGAATAAGACAGTTGGAATGTGGTTGCACTGATTTTATATTGCCATTTAAAGAGATACAACATGTCAATAGTGTCTCCCTCATTTAATGTAATCTTATTCCTCCCAATGAGATATTATAGGTATATTATTCAAATACATTTCTCTTTTTGTTAGGTCTGATAGCAAGAAACAGAAATCCATACAAACTAGTTTAAGGAAAGAAAATTTACTGAAAGGACACTACAGATTTTCATGGGAAGAAGGGTGAAGTCAAGCCAAACCTCCGAGAACAGGAAACTTTGATGTCTCTAGAGTGATGCCTTCCCATTTGCTCCTCCCTGCACCTTTCTCCATGCAAAACAGCTTCCTCTGTTCCAGGATTATGGCCTCCCTTGCCCCTCATCACTTTGGTCTGCCTATAGCTTTAGCTGTCGGAGACTCCATTTTCACCTGACCTGATCCTTTTGTTCCTGACAACTAAATTAGTAAGACCCTCAGAAACCATCAGCTTAAATTCTCAAGAGAACGTATATTTGGCTCAGATCATCAGCTATGAATGTGCTTTCCTTTGTCTGGGAAAAAAGACATTTCTGGAGAAACCAACGTGTCAGCTTAGGCCTGACCTTTCAGCTAACACTAAGGGGTAGTGCCATTCCAAGAGTGTTGCTGAGTGGGGGAAATTCCATTGAATTTGACTCTGCAAATACATGAGTACTTCCCCTATTCCAGGACGGCGATAAATCACCTAAAAACTTAGAAAATTCTAGGATGGCCTCGAACGAGATGGGCTATTTCTACTCTTTTTCAGACTTTAAGGATTAGAGTTTTCCTCAGACTTAATTTAGATTGTTTCAGGTGTCTCCGTGGTGCTATAATGACAACCAAATCTGGGTATTTGACATAGCTAACTCCATTCACCCTACTTTTTTATAAAAAAATTCTTTTTTGTATAGATCTTTTTCATTTGACCCTAGAATTTTTGGACAGCTACTGGGTCTGATATTTATTCTAAATTTTAAATAAGACATTTACATTTTGGACTGCTGAGAATATAACAAGGTCACATATAGCAGAGCTTTGGTGTATATGAAAACAATGGAACAAACCATTAGCTAAGGATGCAGTGGAGGGATCTACGAGTCATTTGGGTACAAGATGGCAAGAGCTAGAACAGGGATGCTGGAGTAGAAATAGGAGGAAGGCAGACAGTCATTCCCCTGCTTCTCCTTTGCCATCTGTACCTTCAGTCATTGTCTGCTGGTTCTGCTCTACTTTATTATTTTATTGTTAATTTTTGTGGGTAGATAGTGGTGTCTATATTTACAGGTTACATGAAATATTTTGATACAGGCATGCAATGAATAATAGTCACATCAGGGTAAACAGGATGTCCATCACCTCAAGCATTTATCCTTTGTGTTACAAGCAATCCAATTATACTCTTTTAGTTATTTTTTAATGTACACAAATTATTTTACCACAGTCACCCTGTTGTGCTAGCAAATACTAGGTCTTATTCATTCTTTCTAACCATTAACCATCCCCACTTCTGCCCTGCACACTCGCCAACTACCCTTCCCAGCCCCTGGTATCCAGCCTTCTACTCCCCATGAGTTCAATCATTTTCATTTTTAGCTCCCACAAATAAGTGAGAAGATATGAAGTTTGTTCTTTTGTGCCCAGCTTATTTCATTTAACATAATGACCTTCAGTTCCAGACAAATGATGAGATCTTATTCTTTTTCATGGCTGATTAGTACTCCATTCTGTATATGTACCACATTTTCTTTATCCATTCATCTGTTGATGGACACTTAAGATTGCTTCCCAATCTTCGCTATTTTGAACAGTGCTGCAATTAACATGGAAGTGCAGATATCTCTTCAATATAATGCTTTCCTTTTTGCGAGGGGACATACCCAGCAGTGGGATTGCTGGAGCATATGGTAGCTCTATTTTTACTTTTATGAGGAGCCGCCAAACTGTTCTCCATAGTGGTTTTACTAATTTACACTCCCAACAACAGCGTACCAGAATTCCCTTTTCTCCACAACCTCGCCAGCATTTGTGATTGCCTGACTTTGGGATAAAAGCCACTCTAACTGGCATGAGATGGTATCTCACTGTAGTTTTGATTTGCATTTCTATGATGATCAATGATGTTGAGCACCTGTTTTCCATCTGCATGTCTTCTTTTGAGAAATGTCTATTGAGATTTTTGTCTATTTTTAATTCAGATTATAACATTCTTTTTCCTATAGAGTAGTTTGAGCTCCTTATATATTCTGGTTATTAATTACTTGCCAGAGGGATAGTTTGCAAATATTTTTTCCCATTCTGTTGGATGTCTCTTCACTTTGTTGATTGTTTTCTTTGCTGTTCAGAAGCTTTTTAACTTTATGTAATCCCATTTGTCCATTTTTGCTTTGGTTGCCTGTGTTTGTGAGGTATTACTTAAGAAATCTTTACTTGGTCCAATGTCCTAGAAAGTTTCCCCGATGTTCTCTTTTAGTAGTTTCATAGTTTGAGGTTTTAGACTTAAGTCTTTAATCCATTTTGGTTTGATTTTTGTATATGGTGAGAGATAGGGTCTAATTTCATTCTCTTTCATATGGATATCCAGTTTTCCCAGCACTGTTTATTGAAGAGGTGGTCCTTTTCCCAATGTATGTTCCTGGCACGTCTGTCAAAAATAAGTTCACTGTATATGTATGGATTTATCTCTGGGTTATCTATTCTGTTCCACTGATTTATGTGTTTGTTTTTATGCCAGTACCATGCCATTTTGGTTACTATAGCTTTGTAGTATAATTTAAAGTCAGGTAATGTGATTCCTCCAGTTTTGTTCTTTTTGCTTAGGATAGCTTTGGCTACCAGGATATTTTGTGGTTTTATATAAATTTTAGAATTGTTTTTTCTATTTCTGTGAATAAGAAATAGATTGGTAGATCCAAATCATTGGTATTTGGATAGGGATTGCATTAAACTTGTCTGTTGCTTTAGGTAATATGGACATTTTAGCAATATTAATTCTTCAATCCATGAACATGGAGTATCTTTCCAGTTTTTGTGTGTCCTCTTCAATTTCTTATCAATATATTTTAGTTTTCATTATAGAGATCTTTCACGTCTTTCGTTAAATCCTAATAGATTTTATTTTATTTGTAACTACTGTAAACAAGATTACTTTCTTGATTTCCTTTTCAGATTGTTCACTGTTGGCACATGGAAATGCTACTGATTTTTGTATGTCGATTTTGTATTTTACAACTTTGCTGAATTTGCTTATCTGTTCTAGTAGTTTTTTTGGTGAGTCTTTAGGTTTTTTGAAATATAAGATCACATCATCTGCAAACAAGGATAATTTGATTTCTTCCTTTCCAGTTTGGATGGCCTTTATTTCTTTCTCGTCTGATTTCTCTAGCTAAGACTTCCAGTACTATGTTGAATAACGGTGGTGAAAGTGGGTATCCTTGTCATGTTCAAGATCTTAGAGGAAAGGCTTTCAGCTTTTCCCCATTCAATATGATGCCAGCTATGGGTCTGTCATATATGTCTTTGATTGTGTTGAGGTATGTTCCTTCTATACCCAGTTACTTTTTGGGGATTTTATCATGAAGGGATGTTGAGTTTTATCAAATGCTTTTTCAGCATTCATTGAAATGATCATATGGTTTTTGTTCTTCATTCTGTTGTTTTGATTTATCACATTGACTGATTTGTGAATGTAGAACCATCCTCACATCCCTGGGATAAATCTCACTTGGTCATGATGAATGATCTTTTTAATGTATTGTTGAATTCAGTTTGCTAATATTTTCTTGAAGATTTTTATGTCAATTTTCATCAAATATATTGGCCTGTAGTGATTTTTTATGTGCCTTTGTCTGATTTTGGTATCAGGTAATACTGGCCTCATATAATGAGTTTGGATGTATTCCCTCCTCTTCCTTTTTCAAAATAGCTTGAATAAGATTGGTATTAGTTCTTCTTTAAATATTTGGTAGATTCACTATACATCTGACAAAGGACTAATATCTAGAATCTACAATGAACTCAAATTATCAAGAAAAAGCAAACAATCGCATCAAAAAGTGGGCTAAGAACATGAATTGACAATTCTTAAGAGAAGATATACAAATGAGCCACAAATATATAAAAAATGCTCAACATCACTAATGATTAGAGAAATGCAAATCAAAACCACAATGCAATACCACTTTACTCTTACAAGAATGGCCATAATCAAAAAATTAAAAAAATAAAAGATGTTGGCGTGAATGCGGTGAACAGTTACACTACTGGTGGGAATGTAAACTAGTACAGCCACTGTGGAAAAGTATGGAGATTCCTTAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAGTCCCACTACTAGGTGTCTACCCAGAGGAAAAGAAGTAATTATACGAAAAAGATACTTGCACATGCATGTTTATAGCACCGCAATTCTCAATTGCAAAAAATGTGGAACCAATCAAAAGCCCATCATTTAATGAGTGGATAAAGAAAATTAAATATATATATATTAGATAAAATATATATTTTATATACATATAAATAATGGAATACTACTCATCCATAGAAAGGAATGAATTAATGGCATTCACAGCAACCTGGGTGAGACTGGAGACTATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAACATCATATGTTCTCACTTATATGTGGGAGCTAAGCTATGAGGATGCAAAGGCATAAGAATGATGCAATGGACTTTGGGGACTCAGGAGGAAAGGGTGGAAAGGGGTGAGGGATAAAAGACTACAAATTGAGTGCAGTGTAAAAGAAGTAATTATACGAAAAAGATACCTACACATGCATGTTTATAGCATCACAATTCTCAATTGCAAAAATGTGGAACCAATCAAAAGCCCATCATTTAATGAGTGGATAAAGAAAATGATATATATATAAAATATATATGAAATATTATATATAAAAATATTATGTAATATATAAAACATTATATATATATAATGGAATACTACTCATCCATAGAAAGGAATGACTTAATGGCATTCACAGCAACCTGGATGAGACTTGCACACTTGGTATTTGGATAGGGATTGCATTAAACTTGTCTATTGCTTTAAGTAATATGGACATTTTAGCAATATTAATTCTTCAATCAACTTCAATACTGCTCGAGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAACAACTTACTCATGGAACCAATCACCACCTGTTCCCCAATAACCTATGGAAATAAAAAAATTTAAATATATATTTGGTAGATTCAGCAGTGAAGCCTTCAGGTCCTGGGCTTATTGTTGATGGCAGCCTTTTTATTACAGCTTTGATCTCACTACTTGTTATTGGTCTGTTCATATTTTGGATTTCTTCATGGTTCAATCTTGGAAGGTTGTATGTATCTAGAAATTCACTCATTTCTTCTAGATTTTCCAATTTACTGGCATATAGTTGCTCACAGTAGCCACTAATGATCCTTTCAATTTCTGCAGTATCAGTTGTAATGTCTGCTTCTTCAACTCTAATTTTATCTGTTTGGATCTTCTCTCTTTTTTCTTACTAGTCTGGCTAAAGTTTTACAAATTGTTTTCATCTTTTTAAAAAACCAACTTTTATTTTATTGATCTTTTGTATTAATTTCTTCATTTCAAATTCATTTATTTCTGCTTTGATTTTCATTATTTCTTTTTTTCTACTAATTTTGGGTTCAATTTCCGCTTGCTTTTCTAATTCCTTAAAATGCATCTTTAGGTTATTTATTTGAAGTTTTTCTTCTTTTTTGATGTAGACACTTAGAGCTATCAGCTACCCTCTCTGCATTGTTTTCACTGTGTCCCACAGGTTTTGGTATGTTGTGTTTCTATTATCATTTGTTTAAAGAAATTTTTCAATTTCCTCCTTAATTTCTTCATTGACCCACTGGTCATTCGGGGCATATTGTTTAATTTCCATGTGTTTGTATAGTTTCCAAAATTACTCTTGTTATTGATTTCTAGTTTATTCCATTGTGGTCAGAGAACATGCTTGATACTATTTCAAGTTTTTGAATGCTCTAAGACTTGTTTTGTGACCTAACATACCGATCCATCCTTGAGAACGATCCATGTACTGAAGAAAAGAATGTGTTTTCTGTAGCTGTTGGATGAAATGTTCTGTAAATATCTATTAGATCCATTTGATCTATAGTGCAGATTAAGTCCAATGTTTCTTGGTTGATTTTCTCTCTAGAAAATCTGTCCAATGCTGAAAGTGTGGTGTTGAAGTCTCCAGCTATTATTTTATTGGAATCGATCTTTCTCTTTAGCTCTAATAATATTTGCTTTATATATCTGGGTGCCCCAGTGTTGGATGCATATATATTTACAATAATCATATCCTCCTGCTGAATTGACCCCTTTATCATTATACAGTGACCTTACTTTGTCTCTTCTCAATGTTTTGTCTTGAATTCTATTTTTTCTGATCTAAGTATTGCAAATCCTGCTCTTTTTTAGTTTCCATTGGCATGGAATGTCTTTTTCCATCCCCTTACTTTCAATCTATATTTATCTTTATAAGTAAAGTGCATTTATTGCAGGCAACAGATCACTGGGTCTTGGTTTTTTTAATCCATTCAGCCATTCTATGTCTTTTGATTGGAGAGTTTTGTCCATTTGCATTAATGTTATTATTGATAAATAAAGACTTACTCCTTCCATTTTGTTATTTGTTTTCTGGTTGTTTTGCGGTCTTCTCTTCCTTTTTTCTTTTCTTCCTGTCCTCTCTCTAGTGAAGGTGATTTTCTCTGGTAATATGGTTTAATTTCTTGCTTCTTATGTTTTGCATATCTATTGTATTTTTTTATTTGAGGTTAGCATAAGGCTTGCAAATACTATCTTATAATCCATCATTTTAAGTTGATAACAACCTAATACTGTTTACATAAAAAAGTAAAAAGAAAACTGATAAAAGCTCTACACCTTAACTTCATCCCTCCACTTTTATTTATTTATTTATTTATTTGAGACAGTCTTGCTCTGCCGGCCAGGCTGAAGTACAGTGGCGTGATGTTGACTCACTGCAACCTCCGTCTCCCAGGATCAAGCAATTCTCCTGTCTCAACCTCCCAAGTAGCTGGGATTACAGGCTTGTGCCACCACGCCTGGCTAGTTTTTGTATTTTTAGTAGAGACGGGTTTCACCATTTTGGCCAGGCTGGTCTCGAATTCCTGACCTCAGGTAATCTGCCCATCTTGGCCTCCCAAAGTGCTGTATCCCTCCACTTTTTATCTTGTTGTTTCTATTTATATCTTATTGTATTGACTGTGTCTTGAAAAACTGTTGTAGTTATTTTTTATTGGTTCATTTAGTCTTTCTTCTTGGGATAGAAGTAGATTACACACCACAGTTATAGTGTTATAATATTCTGTGTTTTTCTATATACTTACCATTACCAGTAAGTTTTACACCTTCAGATGACTTCTTATTGCTCATTAACATCCTTTTTTTTAAAAAACTGAAGTACTCCCTTTAGCATTTCTTGTAGGATAAGTCTGGTGATGATGAAATCCTTCAGCCTTTGTCTGGGACAGTCCTCATTTCTCCTTTGTGTTTGAAGGATATTTTTCAGATATACTACTAAGGTAAAAGGTGTTTTTTCCTTCAGTACTTTAAATATGCCATGCCACTCTCTCCTGGCCTGTAAGATTTCCACTGAAAAGTCTGCTGCCAGATGGACTGGTGCTCTATGGTATGTTATTTGTTTGTTTGTTTTTTCTCTTGCCGCTTTTAGGATCCTTTATTTATCCTTGACTTTGGGGAGTTTGGTCATTAAATGCCTTGAGGTAGGCTTCTTTGAGTTAAATCTGTTTGGTGTTCTATAACCTTCTTGTACTTGGATATTGATATCTTTCTTGAGGCTTGGGAAGTTTCTCTGTTATTATCCTTTTCAATAAACTTTCTACCTCTATCGCTTTCTCTACCTCCTCTTTAATGCCTTATCTCTTAGATTTGCCCTTCCGAGACTATTTTCTACATCCTGTAGAAAATATGCTTTGTTGTTTTTTATTATTTTTTCTTTTGTCTCCTCTGTGTATTTTCAAATAGCTTGTCTGCAAGCTCACTTATTCCTTCTTCCGTTTGATCAATTTTGTCATTAAAAGACTCTGATGCACTCTTTGGTATGTCGATTGCATTTCAACTCCGGAATTTCTGCTTGATTTTTTCTAATCATGTCAATCTCTTTGTTCAGTTTATCCAACAGCATTCTGAATTCCTTCTCTGTATTGTCTTGAAATTCTTTGAGTTCCTCAAAACACCTATTTTGAATTCTTTGTCTGAAAGGTTACATATCTCTGTTTCCCCAGGATTGGTCTCTAGTGCCTTATTCAGTTCCTTTGGTGAGGTCATGTTTTCCTGGCTGGTCTCAATGCTGTGGATGTTCATCAGTGTCTGGGCATTGAAGAATTAGATATTTATTTTAGTCTCCACAGTCTGGGCTTGTTTGTAGCCCTCTTTCTTGGGAAGGCTTTCCAGTATTTGAAGGGACTTGAGTGTTGTGATCTAAGCCTTATCTGCATTATGGGGCACCCCAAGTCCAGTAATACTGTGGTTCTTACAAACTCAAAGAGGTACCACCTTGGTGGTCTTGGGTAAGATCCAGAAGAATTCTCTGGATTACCAACAGATACTCTTGTTCTTGTCCCTTTCTTTCTCCCAAACAAATGGAGTCTGTCTCTGTTCTGAGATATCTAGAGCTAGAGGTTGGGTGACACAAGTACCCCTGTGGCCACGACTGGGGCTATGCTGGGTCAGACCTGAAGCCAGCATAGCACTGGGTCTCACTCAAGGCCAGTGATCACCGCTGACTACTGCCTATGTTTGCTCAAGGACTTGGGGCTCTACAATCAGCACATGGCAAAGCCAGCCAGGTTTGTGTCCTTCCCTTCAGGGTGGCAAGTTCCCCTAATCTCCAGGCAAGTCCACAGATGCCATCCAGGAGCCAGAGACTGGAGTTTAAAACCTTAGAAGTGTACTCAGTGTTCTACTGTACTGTGGCTGAGCTGGCACTCAAACCACAAAACACAGTCCTTCCCACTCTTCCCTCCCTTTTCCAAAGGCAGAGGGGCCTCATCCCATTGCCACCACTACAGACCCATGGGGAGTACTGCTAGGCTACCACTGATGTTCACTTAAAGGCCAAGCGCTCTTCAGTCAGCTTGTGGTGAATGCTCCCTGCCCTGGGACTCATCTTCAGGGTAGTGGACTTCCCTCTGGCCCAGGGCAGGTCCAGAAATGCGATCCAAGGCCCAAGGCCTAGAACTGGGGAACCCAAGATCCCACTTGTGCTCTACTCTCATGGCCAAGCTGGTACCCACTGATGTTCACTTAAGGGCCAAGGGCTCTTCAAGATGCAAGCCAAAGTTCCCTTTACTTTTCCCTCTGCTTTTCTCAAGAAGAAGGAGTCTCTCCCCATAGCCACCAGAGCTGGGAATATGCTAAATCTCACCTGAAGCCAGTAAGTCTCAGGGTCTCACCCAAGGCCTGTGGCATATTACCTTGGTATCACTGCTGGTTATTCAGGGATCAAGTGTTCTTTAGTCAGCAGGGTATGAGGCCTGCCAGGACTGGGTCCTTCCTTTCAAGGGAGTGGGTTCCCTTCCAGTCCAGGGTGTGTCTAGAAATATTGTCCAGGAGCGAGGGCCTGAAAGTTGGCCTCCTGACTCTGACAGGTGTCCTTTCCTACTGTGGCTATGCCAGTATCCTAGATGAAAGACAAAGTCCTCTTCAATCTTCTCTCTCCTCACGCGGAAGGAAGGGGTCTCATTTGGAGCTGCGAGCTGTTCAGCCTGGGACTGGGGAGAGGGGTGGGGCAAGCATTCCCTTAGCCTCCCTGGCTGTTGTCTCAGTAGGTCATGTGTCCCCCCAGTCCACTGGTTCTGAGCCCAGTTCAGCACTAGGACCTGCCTAGGAGTTACAGTCCTTGTTGCCTAGACTGCCTTTTAAGTTTATTTAGGGTTTCAGAGGCACTTTATTCTGTGGTGGCAAGGCTTGCCAGAACTCCAGTTCTGACAGCTGGGATGGGTGATTCCCTTCCGGCTAGGGCCAGTTAAAATACTCCTTCCATGAGTAGGGGGTCAACTGAGTTCAGCTGGCTTAGCTTTCTGTTGTGATAGGGCACCACTGAATTCAACACAATGTCTCACAATTGCTGTGCTCTCCTTCTCCCAAGCACATAGATTCTCTCTCTGCGCTGCACGTTTGGGGCATAGGAGATGCGGGAGGGGTGGCATCAGCACTTCAAGACTGTCTCCTACTCTTTTCAGTGGCTCTTTCAGTGATATGAAGTTAAAATCAGGAACTGTGAGTGCTCACCTGATTTTTGGTTCTCAGGAACTTGCTTTTTTTTTGTTGTTTAAATAGTTGTTAAACTGGTGTCCTTGCAGGGGGAACAATCAGTGAAGCCTTCTATTTGGCCATCTTACTCAACATCTCTCCCATTCTGCTTTCTAAATAAAT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3729:HG2_PB_PB10Xdip_24455:HG4_PB_SVrefine2Falcon1Dovetail_3631:HG2_10X_SVrefine210Xhap12_4363:HG2_PB_SVrefine2Falcon2Bionano_2972:HG2_PB_SVrefine2Falcon1plusDovetail_9648:HG2_PB_SVrefine2PBcRplusDovetail_8998:HG2_PB_SVrefine2PB10Xhap12_4336:HG4_PB_SVrefine2PBcRDovetail_2990;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4336:HG2_PB_SVrefine2PBcRplusDovetail_8998;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00240783;ClusterMaxSizeDiff=0.00234763;ClusterMaxEditDist=0.00704374;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=16629;DistBack=11079;DistForward=45228;DistMin=11079;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2446;REFWIDENED=5:94548272-94550717;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4432.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:80:1/1:1:30:1:13:./.:0:0:0:0:./.:0:0:1/1:0:488:.:16539:.
chr5	97567278	HG2_PB_SVrefine2Falcon1plusDovetail_9661	T	TTATATATATTATAAATTATATATATTTATATATATAACGTATTTTATATATATTATATATCATATATATTATATAGTATATATAATTACTATATAATATATATAATATATATAATATATATTATATAATAATATTATATATTGTATATATAATATATTACATATTATATATTGTATATTATATAATAATATATTATATAATATATATTATATATTATTTATAATATATATCATATATAATATATTATATATAATATATTATACATATTATATATATTATATGATATATTATATATAATATATATCATATAATATATATATTATATGATATATATCATATAATATATCATATAATAATATATTATATTATATATATCATATAATATATATAATATGTATAATTATTATATATTATATAATATAATATATATATTATATATTATATATAATATATATAATATATTATATTATACATAATATATTATAATATATTATCATATAATTTATGTTATATTATAATATAATATAATACATTTTAATATAATATATTATATATTTTATATTATGTATTACAATATAATATATTATTATATTTATATTATATATTATAATATAATATATTATGTATTTTATATTATACATTATAATATAATATAATTATATATTGTATTATATATTATAATATGTGTTATATATTATAATATAATATATTATATTCATATATTATATTATAATATATATATTATATATAATATATATTATATTATATATTTAATATAATATATTATATTATGTATTATAATATAATGTATTATATTATATATTGTAATATAATATATTATATTATTATTATAATATAATGTATTATATTATATATTATAATATAATTATATTATATTATATATTATAATATAATTATTATATTAATATATTATAAATATAATATATTATATATTATATTTATTAATATAATATTTATATATTTATATTATATATTATATATATATAATATATATTAATATATTATATATATATAATATATATTAAATATTATATAATATATATAATATATATAATATTAATATATATTAATATTATATAATATATAATATATTAAATATAATATATAAGATATATATTATATAATATATAAGATATATATTATATAATATATAAGATATTATATAAGATATATATTATATAATATATAAGATATTATATAATATATAAGATATATATTATATAATATATAAGATATTATATATATATAAGATATTATATATAATATATAAGATATTATATATAATATATAAGATATTATATATAATATATAAGATATTATATATAATATATAAGATATTATATATAATATATAAGATATTATATATACATATAATATAAGATATATATTATATATAATATCTTATATATTATATAATATATAAGATATATATTATATATAATATCTTATATATTATATAATGTATAAGATATATATTATATATATCTTATACATTATATAATGTATAAGATATATATTATATATAATATCTTATATATTATATAATGTATAAGATAGATATTATATATAATATCTTATATATTATATGATATATCAATATTTTATATATAATACGATATATCATATATTTTATATATATTTATACGATATATAATATACATTTTATATATATTATACGATATATAATATACATTTTATATATATTATACGATATATAATATACATGTCATATATATTATACGATATATAATATACATGTCATATATATTATACGATATATAATATACATGTCATATATATTATACGATATATAATATACATGTCATATATATTATACGATATATAATATACATGTCATATATATTATACGATATATAATATACATGTATATATATTATACGATATATAATATACATGTTATATATATTATATATATAATATACATGTTATATATATTATACGATATATAATATACATGTTATATATATTACGATATATAATATACATGTATATATATTATACGATATATAATATACATGTTATATATATTATACGATATACAATATATGTTATATATATTATACGATATACAATATATTTATATATATTATACGATATACAATATATTTTATATATATTATACGATATACAATATATTTATATATATTATACGATATACAATATATTTTTATATATTATACGATATACAATATATTTTATATATATATACGATATATAATATATATTTATATATTATACGATATATAATATATATATAATATATATTGTATATATATTATATAATAAATCTAATATATATATATATATTTATATAATATATAATATATATATTAGATATATTATATATAATATACATTAGATATATATTATATATATAAAATATATATAATATATATATATATATTATATAAAATATATATAATATATATAATATATATATAATATATAAAA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3741:HG4_PB_HySA_8930:HG2_PB_HySA_11140:HG3_PB_pbsv_5835:HG2_PB_SVrefine2PBcRplusDovetail_9009:HG4_PB_SVrefine2Falcon1Dovetail_3645:HG2_PB_SVrefine2Falcon1plusDovetail_9661:HG2_PB_SVrefine2PB10Xhap12_4348:HG2_PB_SVrefine2Falcon2Bionano_2985;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9661;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0932015;ClusterMaxSizeDiff=0.0932015;ClusterMaxEditDist=0.212304;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=2493;DistBack=-794;DistForward=-1;DistMin=-794;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=784;REFWIDENED=5:97567279-97568062;PctSeqSimilarity=0.9636;PctSizeSimilarity=0.9588;PctRecOverlap=0.7501;SizeDiff=-107;StartDistance=-596;EndDistance=-596;GTMatch=0;TruScore=89;MatchId=4438.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:72:1/1:1:22:2:15:./.:0:0:0:0:0/0:40:0:./.:16:181:.:2531:.
chr5	141975771	HG2_PB_SVrefine2PB10Xhap12_4526	A	ATGCCTGTAATCACAACACTTTGGGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGGAGTTTGAGGCCAGTCTGGGCAACATAGCAAGACCCATTCTCTACAATTTTTTTTTTAATTAGCTAGGTGCCATGGTGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4526:HG3_PB_HySA_9581:HG2_PB_PB10Xdip_23311:HG3_PB_pbsv_6018:HG2_PB_SVrefine2Falcon2Bionano_3096:HG2_PB_SVrefine2PBcRplusDovetail_9140;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4526:HG2_PB_SVrefine2PBcRplusDovetail_9140;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0362319;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.157706;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=135;DistBack=21659;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=476;REFWIDENED=5:141975772-141976247;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9783;PctRecOverlap=0;SizeDiff=-3;StartDistance=-146;EndDistance=-146;GTMatch=0;TruScore=65;MatchId=4499.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:./.:12:11:11:11:./.:0:0:0:0:0/0:18:0:./.:.:.:.:.:.
chr5	144562568	HG2_PB_SVrefine2PBcRplusDovetail_9149	T	TATATATTCATGTTATATGTTATATATTTATATATAACATATATATTCATGTTATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATACATATCTTCATGTTATATGTTATATATTTCTATATAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3111:HG2_PB_PB10Xdip_23318:HG4_PB_SVrefine2Falcon1Dovetail_3769:HG3_PB_SVrefine2Falcon1Dovetail_3873:HG4_PB_pbsv_6228:HG2_PB_SVrefine2PBcRplusDovetail_9149:HG2_PB_pbsv_6207:HG2_PB_SVrefine2Falcon2Bionano_3103:HG3_PB_SVrefine2PBcRDovetail_2876;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_9149:HG3_PB_SVrefine2Falcon1Dovetail_3873;NumExactMatchSVs=2;ClusterMaxShiftDist=0.364988;ClusterMaxSizeDiff=0.364988;ClusterMaxEditDist=0.370927;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=649;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1044;REFWIDENED=5:144562569-144563612;PctSeqSimilarity=0.9878;PctSizeSimilarity=0.9488;PctRecOverlap=0;SizeDiff=-35;StartDistance=-894;EndDistance=-894;GTMatch=1;TruScore=64;MatchId=4505.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:9:89:1/1:1:21:4:19:./.:0:0:0:0:./.:0:0:0/1:2:13:.:1031:.
chr5	166777766	HG2_Ill_GATKHCSBGrefine_4437	T	TGGATATATATATATGGGATATATACATATGGATATATATATGGGATATATACATACGGATATATATATATGGGATATATACATAC	10	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_4437:HG3_Ill_GATKHC_10601:HG3_Ill_GATKHCSBGrefine_4333:HG2_Ill_GATKHC_10618;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4437:HG3_Ill_GATKHC_10601:HG3_Ill_GATKHCSBGrefine_4333:HG2_Ill_GATKHC_10618;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=85;DistBack=115;DistForward=32;DistMin=32;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=665;REFWIDENED=5:166777557-166778221;PctSeqSimilarity=0.9318;PctSizeSimilarity=0.7059;PctRecOverlap=0;SizeDiff=25;StartDistance=-249;EndDistance=-249;GTMatch=1;TruScore=54;MatchId=4536.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:./.:4:9:3:0:./.:0:0:0:0:1/1:2:25:./.:.:.:.:.:.
chr5	177952744	HG4_PB_pbsv_6395	T	TTTAAGCTCACTATGCTGGTAAGAAATGGCGACACAGCGCGCAGACCCCGGGCCGAAGGCTAAGCTCCCACATAGGCTGGTAAGAAATGGCGGACACAGCGCGCAGGACCCCGGGACCCGGATAGGCTAAGCTCACCATGGCTGTAAGAAATGGCGGATCACAGCGCGCAGGACCCCGCGGACCCGTAAGGCTAGCTCACATGGCTTTGGTAAGATAATGGGCGGACACAGCCGCCAGACCCCGGGACCCGAAGGCTTAAGCTCACATTGCAGCTTGGTAAGAAATGGCGAACACAGCGCGCAGACCCCGGGACCCGAAGGCTAAGTTCACATGGGCTGGTAAAAATTGTCTCAAATGAGGCGACACAGGCGCCGCAGACCCCGGACCCGAAGGCTAAAGCTCCACATGGCTGGTAAGAAATGGCGACAACAGCGCGCAACCCCGGGACCCGCAAGGCTAAGCTCACATCGCTGTGTTAGAAATTGCGACACAGCGCGCAGACCCCGGACCCGAAGGCTAAGCTCACATGGCTTGGTAAGAAATGGCGGACACAGCGCGCAGACCCGCGGACCGAAGGCTAAGCTCACATGGCTGGTAAGACAAATGCGCGACACAGCGCGCAGACCCCGGACCCGAAGGCTAGCTCACATTGGCTGGTAAGATAATGGCGACACAGCGCGCAGACCCCGCGGCACCGAAGGCTAAAGCTCACATGGCTGGTAAGAAATGGCGACACAGCGCGCAGACCCCGGGACCCGAAGGTCTAAGCCTCACATGGCTGGTAGAAATGGCGAACACAGCGCGCAGGACCCCCGGGACCCGAAGGCTAAAGCTCACCATGGCTGGTAAGAAATGGCCGGGACACAGCGGCAGACCGCCGGGACCCGAGGCTTAAGCTCACATGGCTTTGGTAAGAAATGGCGACACAGCGCGAGACCCCGGACCCGAAGGCTAAGCTCACATGGCTGGTTAAGAAATGGCGACACAGCGCGCAGGGACCCCGGGACCCGGAAGGCTAAAAAAGGGGGCCTCACATGGCTGGTAAGAAATGTGACACAGCGCGGCAGACCCCGGGACCCGAAGGCTAAGCTCACATGGCTGGTAAGAAATTGCGACACAGCGCGCAGGACCCCGGGACCCGAAGGCTAAGCTCACTAGGCTGGTTAAGAAATGGCGACAACAGCGCGCAGAACCCCGGGGACCCGAAGGCTAACAGCTCACAGGCTGGTTAAGAAATGGCGACACAGCGCGCAAGACCCCGGGACCCGTAAGGGCTAAGCTCACATTGGCTGGTAAGAAATGGCGACACTAGCGCGCAGACCCCGGGACCCGAAGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3194:HG4_PB_pbsv_6395:HG2_PB_pbsv_6384:HG2_PB_PB10Xdip_23493:HG2_PB_HySA_11936:HG3_PB_SVrefine2Falcon1Dovetail_3984:HG2_PB_SVrefine2PBcRplusDovetail_9244:HG2_PB_SVrefine2PB10Xhap12_4665;NumClusterSVs=8;ExactMatchIDs=HG4_PB_pbsv_6395;NumExactMatchSVs=1;ClusterMaxShiftDist=0.207835;ClusterMaxSizeDiff=0.20701;ClusterMaxEditDist=0.241649;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1337;DistBack=39;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=727;REFWIDENED=5:177952021-177952747;PctSeqSimilarity=0.9637;PctSizeSimilarity=0.9424;PctRecOverlap=0.5131;SizeDiff=77;StartDistance=613;EndDistance=613;GTMatch=0;TruScore=80;MatchId=4552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:77:1/1:1:9:3:10:./.:0:0:0:0:./.:12:1:0/1:18:28:.:1413:.
chr5	178561720	HG2_PB_SVrefine2PB10Xhap12_4672	C	CCTCCCGGCTCCAGCTCCAGCTCCAGCTCCCGGCTCCAGCTCCAGCTCCCGGCTCCATCCCCCAGCTCCCGGCTCCAGCCCCCAGCTCCCGGCTCCAGCCCCCAGCTCCCGGCTCCAGCTCCCAGCTCCCGGTCCAGCTCCCGGCTCCAGCCCCCAGCTCCCGGCTCCAGCCCCAGCTCCCGGCTCCAGCCCCAGCTCCCGGCTCCAGCTCCCAGCTCCCGGCTCCAGCCCCCAGCTCCCGACTCCAGCTCCAGCTCCCGGCTCCAGCCCCCAGCTCCGAGCCTCTAGCCCCCAGCTCCCGGCTCCAGTCCCCAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3895:HG4_PB_SVrefine2PBcRDovetail_3177:HG2_PB_SVrefine2PBcRplusDovetail_9251:HG2_PB_SVrefine2PB10Xhap12_4672:HG2_PB_SVrefine2Falcon1plusDovetail_9927;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4672:HG2_PB_SVrefine2PBcRplusDovetail_9251;NumExactMatchSVs=2;ClusterMaxShiftDist=0.171821;ClusterMaxSizeDiff=0.171821;ClusterMaxEditDist=0.185567;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=314;DistBack=7788;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=350;REFWIDENED=5:178561721-178562070;PctSeqSimilarity=0.9446;PctSizeSimilarity=0.9429;PctRecOverlap=0;SizeDiff=-19;StartDistance=-361;EndDistance=-361;GTMatch=0;TruScore=62;MatchId=4553.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:56:0|1:21:2:1:30:./.:0:0:0:0:./.:1:0:./.:1:7:.:.:.
chr5	178791595	HG2_PB_SVrefine2Falcon1plusDovetail_9931	A	GAGGGGAGAGGGAGGGAGAGACGGAGGGGGAGAGGGAGGGAGAGACGGAGGGAGAGGGAGGGAGAGACGGAGGGGGAGAGGGAGGGAGAGACGGAGGGGGAGAGGAGAGAGACGGAGGGGGAGGAGAGGGAGAAGAGCCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3203:HG2_PB_assemblyticsfalcon_22372:HG2_PB_SVrefine2Falcon1plusDovetail_9931:HG4_PB_assemblyticsfalcon_21818:HG2_PB_pbsv_6397:HG4_PB_SVrefine2Falcon1Dovetail_3899;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9931;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0505415;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.283688;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=139;DistBack=94;DistForward=9739;DistMin=94;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=376;REFWIDENED=5:178791240-178791615;PctSeqSimilarity=0.9773;PctSizeSimilarity=0.972;PctRecOverlap=0;SizeDiff=-4;StartDistance=144;EndDistance=144;GTMatch=0;TruScore=64;MatchId=4555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:0|1:22:1:3:19:./.:0:0:0:0:0/0:10:0:./.:.:.:.:.:.
chr5	180061802	HG2_PB_SVrefine2PBcRplusDovetail_9270	A	ATGGGTGGGTAGGTGGGTGGGTGGGAGGATGGATGCATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGGTGGATGCATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGGTGGGTGGATGGATGCATGGAGGGAAGTATGGGTGGATGGGTGGGTGGGTGGGTGGGTGGGTGGATGGATGCATGGATGGACGGAAGTATGGGTGGATGGGTGAATGGGTGGGTGGGTGGGTGGATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGGTGGGTGGATGGATGCATGGATGGAAGTATGGGTGGGTGGGTGGATGGATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGATGGATGGATGGATGGAAGTATGGGTGGAGGGGTGGGTGGATGGATGCATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGGTGGGTGGGTGGATGGATGCATGGATGGAAGTATGGGTGGGTGGGTGGGTGGATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGATGGATGGATGGATGGAAGTATGGGTGGAGGGGTGGGTGGATGGATGCATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGGTGGATGGATGGATGGAAGTATGGGTGGATGGGTGGATGGATGCATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGGTGGATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGGTGGATGGATGGATGGATGGAAGTATGGGTGGATGGGAGGGTGGGTGGATGGATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGGTGGATGGATGGATGGATGGAAGTATGGGTGGATGGGAGGGTGGGTGGATGGATGGATGGAAGTATGGGTGGATGGGTGGGTGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3219:HG4_PB_SVrefine2Falcon1Dovetail_3912:HG2_PB_SVrefine2Falcon1plusDovetail_9949:HG3_PB_SVrefine2Falcon1Dovetail_4005:HG2_PB_SVrefine2PBcRplusDovetail_9270:HG2_PB_SVrefine2PB10Xhap12_4696;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3219:HG2_PB_SVrefine2PBcRplusDovetail_9270:HG2_PB_SVrefine2PB10Xhap12_4696;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0415497;ClusterMaxSizeDiff=0.0415497;ClusterMaxEditDist=0.0462232;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=908;DistBack=12515;DistForward=71;DistMin=71;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1210;REFWIDENED=5:180061803-180063012;PctSeqSimilarity=0.9106;PctSizeSimilarity=0.8227;PctRecOverlap=0;SizeDiff=161;StartDistance=-923;EndDistance=-923;GTMatch=0;TruScore=57;MatchId=4559.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:1/1:1:16:0:5:./.:0:0:0:0:./.:0:2:0/1:10:29:.:3363:.
chr6	1124182	HG3_PB_SVrefine2PBcRDovetail_3003	C	CTTGGCAGAGGGGTCATGTGCAATGGGATGGGAGTCGATGGCAGAGGTCATGTGCAATGGGATGGGAGTTCTGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3003:HG3_PB_HySA_10029:HG2_PB_HySA_12064:HG3_PB_pbsv_6276;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_3003;NumExactMatchSVs=1;ClusterMaxShiftDist=0.172185;ClusterMaxSizeDiff=0.172185;ClusterMaxEditDist=0.370861;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=73;DistBack=17733;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=34;REFWIDENED=6:1124181-1124217;PctSeqSimilarity=0.9902;PctSizeSimilarity=0.9605;PctRecOverlap=0;SizeDiff=-3;StartDistance=-129;EndDistance=-129;GTMatch=0;TruScore=65;MatchId=4567.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:21:0|1:25:1:1:16:./.:0:0:0:0:./.:44:4:./.:.:.:.:.:.
chr6	1244093	HG2_PB_SVrefine2PBcRplusDovetail_9302	T	TTTCCCCAGCACTAGCCTTCATCTCCATCTGCACATGGGACGGCTTTGGAGAAAGACACTGTATGGAATAAATAGGTCATAAGGGTTCCCCAGCACTAGCCTTCATCTCCATCTGCACATGGGACGGCTTTGGAGAAAGACAATGTATGGAATAAATAGGTCATAAGGGTTCCCCAGCACTAGCCTTCATCTCCATCTGCACATGGGACGGCTTTGGAGAAAGACAATGTATGGAATAAATAGGTCATAAGGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9982:HG3_PB_assemblyticsfalcon_22344:HG3_PB_SVrefine2Falcon1Dovetail_4039:HG2_PB_HySA_12068:HG2_PB_PB10Xdip_26046:HG4_PB_pbsv_6482:HG2_PB_PB10Xdip_26045:HG3_PB_pbsv_6284:HG2_PB_pbsv_6472:HG3_PB_SVrefine2PBcRDovetail_3006:HG2_PB_HySA_12066:HG4_PB_SVrefine2Falcon1Dovetail_3946:HG2_PB_SVrefine2PBcRplusDovetail_9302:HG2_PB_SVrefine2PB10Xhap12_4739:HG3_PB_SVrefine2Falcon1Dovetail_4038:HG2_PB_SVrefine2Falcon2Bionano_3240:HG3_PB_HySA_10041:HG2_Ill_SVrefine2DISCOVARplusDovetail_10874;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4739:HG2_PB_SVrefine2PBcRplusDovetail_9302:HG4_PB_SVrefine2Falcon1Dovetail_3946;NumExactMatchSVs=3;ClusterMaxShiftDist=0.292517;ClusterMaxSizeDiff=0.292517;ClusterMaxEditDist=0.344942;PBcalls=17;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=252;DistBack=8624;DistForward=235;DistMin=235;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=421;REFWIDENED=6:1244094-1244514;PctSeqSimilarity=0.9938;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-310;EndDistance=-310;GTMatch=1;TruScore=66;MatchId=4569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:97:1/1:0:14:0:21:./.:0:0:0:0:./.:0:2:./.:.:.:.:.:.
chr6	12108396	HG2_PB_pbsv_6572	C	CAATTGGCTGCATTCACAACCCTGAGCTAGACACAGGTGCTGATTGCGTCGTTGTTTACAAACCTTGGGCTAGATAACAGACGCTGCCTATTTTGGTATATTTACAATCCCTGACTAGACATAAAGTTTCTCCAGGCCACGCACCAGAGTAGCTTAGACTACAGAGTGT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4012:HG2_PB_pbsv_6572:HG4_PB_pbsv_6581:HG4_PB_SVrefine2PBcRDovetail_3285:HG4_Ill_SVrefine2DISCOVARDovetail_4886;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_6572;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0607903;ClusterMaxSizeDiff=0.0547112;ClusterMaxEditDist=0.192771;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=168;DistBack=-140;DistForward=5781;DistMin=-140;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=336;REFWIDENED=6:12108187-12108522;PctSeqSimilarity=0.9749;PctSizeSimilarity=0.9524;PctRecOverlap=0;SizeDiff=8;StartDistance=194;EndDistance=194;GTMatch=0;TruScore=64;MatchId=4599.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:33:1|0:7:25:34:4:./.:0:0:0:0:0/0:46:0:./.:.:.:.:.:.
chr6	18327736	HG2_PB_SVrefine2PB10Xhap12_4835	A	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGGAGGAGAGAGGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGGAGAGAGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3307:HG2_PB_SVrefine2PB10Xhap12_4835:HG2_PB_SVrefine2PBcRplusDovetail_9350:HG3_PB_pbsv_6423;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4835;NumExactMatchSVs=1;ClusterMaxShiftDist=0.267303;ClusterMaxSizeDiff=0.267303;ClusterMaxEditDist=0.267303;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=362;DistBack=-19;DistForward=0;DistMin=-19;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=81;REFWIDENED=6:18327737-18327817;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4614.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:19:0:4:24:./.:0:0:0:0:0/0:11:0:0/1:2:9:.:.:.
chr6	35754560	HG3_PB_SVrefine2PBcRDovetail_3103	A	AAACCTTTTAAAAACTGTTCAGTCCCCTCCAGGCATCCACCGTCTGCACAGACTTACCCCGGCCCCCACGTAGAGACCACCCTGCCTGGCAGGAGCCAGAGGTGATGGTGGGAGCAGAGTCTGGGGAGGAGCCCCGTAGGGAGAAAGCCCCAGGCGGGGCGGCGAGGGCGGAAGGCGGGCGGTGGAGCCTGGCGGTGCCGTGTCCCTCCCTGCAGGAGCTCAAGGAGTCTTGCATCCGGAACCAGGACTGCGAGACTGGCTGCTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTGCGCGGAGAAGGGGTCCGAGGGCAGTCTGTGTCAAACGCAGGTGGGTATCGCCGCCCGGGGGGAGCCAGAGGGGATCCAGGGGAAGTGGGAGCCAGGGCGGGCCCAGATTCCTGGGGAGGAAAGAAGGGTAGGTGGGCGGAAATGCCCTGGAGCCTGGAATTCCCCCGTGGGACTGCACCTCCAAGCCTTCTGGGGGAGCCTGTGGACGGAACCAATATGGTAGCCCACCCTAGGGTTTTGGAATCCTGGATTGGGGCGGGAAGGCGATGTTTCACTTTCTAATGTGGGTTCACATTCTCCAGGAGTCTTCTCAGCAAATTCCGAAAGTAGTACAGTAAATGGGCACAGCTAGGTCCAGCCTCTGCCCCAGAGCCCCGTCTTCATCCAGCTCAGGAGTTCTGCTGTGGCCCCGGGTGTTCCTGGTGGAGGATGGGCAGAGGCAGCCTCTGAGCTGGGTGTGTAGGGGAGGGAGTTGATTTGCCCATGGAAGGATTTAAAGACAAGACATAGAGGTCCTGCGATGGTGTGTCCATGGACTTAGGACAGGCAGATGGGTCAGTGACAGGCAGGGTTACAAGGTCTGGAGCTGGGAGGACACTGAACAATCCAGGAGCCAGCCTGGAGAAGGCAGCCAGAGGTGCCACTCTGAGCAGCTGGCAAGCTATCATTTATCCCTGGATCCTGGCTGTGGGCAAGCACATGGGCCCTGGAGCTGGGCTGGGCTGGGCTTAGGGGCTCAGGGAAGAGCTGCCGCCAAGGTCGAGGTCAAAGTCCTGTCTTTCCCAGGTGTTCTTTGGCCAGTATAGAGCGTGTCCCTGCCTGCGGAACCTGACTTGTATATATTCAAAGAATGAGAAATGGCTTAGCATCGCCTATGGCCGTTGTCAGAAAATTGGAAGGCAGAAGTTGGCTAAGAAAATGTTCTTCTAGTGCTCCCTCCTTCTTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTCACCCTGTTCCCCAGAGCCTCCACCATGAGTGGAGGGAAGTGGGGAGTGATTGAAATAAAGAGCTTTTTCAATGTTTGCTGCCCACAGAGTTGGGGCCTGGGTGGGCTGGGCTGGGGTGGGCATGGTACAGGTTTCTGGGGGGTGGGGAGGTGATATGAGGGAGGAAGCAGGAAGGGACACTGTTGGACTTGGGGTCTTTCCCCAGTTGGGGCATGAATGAAAGTCCCCCAGAAGAGACCAAAGCTCCCTTCCCACCCCAACCCCTTTCTGCCTTCAGCCCACTCTGTAATCTACCCCCCGGAAGCCCAGTTTACACCTGATATTCCAGTTCCACGACCTTAAATTTCAGAAATGTGAAAGAAGGTACACAAAATATCCATGTGTATAAAGAATTGAGGATGTTTATTGAGCACTTACTAGATGTTAGGGGCCGCTCTAGCTGCCTTATGCACATGATCTCATTTAATCCTGCAACAAACCTGTGGGGTCTCTCCTGTTATCACCTCTGTTTTACAGGTAGGGAAACGGGTTGAGCAACTTGTTCAAGGTCACACAGTTGGAAAGTGCTGAATCTGAATCTTCTGGGAGGCAAGAGAAAAGAGGGACAAGAAAAGAAGGAAGGAAGGAAGGAAGGAGAGCCTAGGAAAGAGTGAGAAAGAAAGACTGGAGCAGCGACTGTGGTGTGGGGTTGGAGAGAGAATGAGTCAAGTGGAGTTTTAGGAAGTCTCAGTGTGTGGTGAGGCTTTTGGAGTTAGATGCTAGCTCGCTTGTCTGTGAGTAGTGCCTGTTATATTCAGGTTACATTTTGGAGTTAATTATTTCAGATTTTGGACCTAAATTTCCACATTCAGCCACCAGAACTGAGCCAAACATGCCCTCCAGGATGTTGGGCTTAGGATGCAAGGGCTGGGGAGTTTGGAGGTAAACTATGGTTGTACTTAGAACGCCCCCTTGTAAGTCATAGCAAAACGATGTGAACCATACCTTGGTAGAATATGCTGTCCTGTACTAAATGTATCAGACAGATAACCAGACTTCCATTGTGTTATGTGAGCTCTCCCCATTCAGAGAAAACCTATGAAATGACCGTGGAAGGAGAGGTGGCAGGCTGGAAACCCAATGATACCCAATGTCTAAGAAGTTCCCAAGGATACCCAATGTCAAGAAGTTAGAAGGGGAAGGGGAGAATACAGAGCCCAGAAATAAACCCAAGCCTGTACAGCCAATTAAGTTTCAACAAGGGCACCAAGAAGACACCTTGGGGAAAGGATAGTCTTTTCAATAAATGGTGTTGGGAAAACTGAATATTCACATGCCAAAGAATGGAATTGGACCCTTATAGCACACACAAAAATAAACTCAAAATGGATTAAAGACCTAAATATAAGACCCAAAACTGTAAAACTCCTAGAAGAAAATATAGGGGAACTATTACACGACATTGGTCTTGACAATGATTTTTTGGATAAGACACCAACAGCACAGGCAACAATAGCAAAAATAAACAAATGGGACTACATGCTGAAAAGCTCTGGACCGAGCACGGTGGCTCATGCCTGTAATCCCAGCACTGTGGGAGGCCGAGTTGGGTGGATCATCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCATCATGGTGAAACCCCATCTGTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGCAGTCCCAGCTACTCAGGGGGCTGAGGTGGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCATACCACTGCACTCCAGCCTGGGCAACAGAGCAAGACCCTGTCTCAAAAAAAAAAAATTAATTTGAGGAAATTTTATGGTTTGGTTTTGTTTTGTTGGAGACAGGGTCTCACTCTGTCACCCAGGCTAGAGTGCAGTGGCTCCATCTCAGCTCACTGCAGCCTCATCCTTCTGGGCTCAAGTGATTTTCCCATCTCAGCCTCCTGAGTAACTGGGACCACAGGTGTGCGCTACCACACCTAACTAATTTTTAAGATTTTTGTAGAGATGGGGAGGGGGAGATCTCACCATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGCAATCCTGCCTCAGCCTCTCAAAATGCTGGGATTACAGGCATGAGCCACTGTGCCCGGCTGAAATTTCACTTTTTTCCAATATTGGATATTTTCATCCAGGAATATAAAATGCTTTAAAACAAAGTTGTTAATTTTTTTAATAAACGTTTTTAGCCTAATAAGGAAAAAAAAGAAACAAAAAAGAAAGGGAGTTGGGGAAGATACGTTGCTGACATGACTAAACTGGTTCCAAGTGTTGGGGGAGGAAAACTTTTCCTCTATCCTCTTAGGTTCAGTACTTGAAGGCCTGAGAATTAAACCGATAAAAGAGAAATGACCGATTTTTATTCAGAATGTAGGGAAGTTCATGGAAGAGTGTGACTCTAGAAGGAAGTTAGAATTTGCGGGTTATGTACCATCTCATAGAAGAAGGGGAGGAGGAGAAAGGACACTTATAGAAAAGTAATTTTTAGGAAAGATGAATGGGCCCTTAGGAGAAAAGATGGGAGCTATTATAGTTTCGTGACCTGACTGTTTAGGTGTGGTGCCAACTATTCTCCCCTCCAGCAATAAGTCAATTTTCCCTGGTTTTGAGAAACTCCTGGGAGGGGGATTTATGACAATGGAGCTCTTTTGCAGGGCTCTGCATTTAGGCAGACAAAGGAGTTCAGAAAAGAGCCTATTCTCATCCAGCCTGGGCAGCATTGCGAAACCCTGTGTCTGAAAACAAACAACAACAGCAACATAGCCGGTGGTGGCACGCACGTGTAGTCCTAGCTACTTAGGAGGCTGAGGCAGGAGGATCACTTGAGCACCAGGAGGTTGAGGCTGCAGTGAGCCATGGTCGCACCACTGCATTCCAGCCTGGGTGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAAGGCCCATTTTCAAATGCCTTCTGCTCAGAATAATTTTTATGCTTCAGTGGCATTCTCTAGACCCCTTCACAAGCCATGGGGATTCCGCTGCCCTATGGGAAAAGTGGTCATTGGTAGAGGCTGCCGTTGTCAGAATCCAGAGAGATTTGTAGGGAATAAAGTACAGATGCTCCTTGACTTACGATGGGGCTACATCCTGATAAACACATTGTTTAAGTTGAAAATATCGTAAGTTGAAAATACGTTTAATAGGCCGGGCACGGGGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCTGAGGCAGGCGGATCACAAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGGGGCACGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGCGAGCCGAGATCGTGCCATTGCATTCCGGCCTGGGTGACAGAGTTAGACTCTGTCTCCAAAAAAAAAAAAAGAAAAAGAAAAAGAAAATACATTTAATGGGCAGGTGTGGTGGCTTGTGCCTGTAATCCCAGCACTTTAGGAGGTTGAGGTGGGCGGATTGCTTGAGCCTAGGAGTTTAAGACCAGTGTGGGCATCATGGTGAAACCCCATCTCCACTAAAAATATAAAAATTAACGTCCGGGCATGGAGGCTCACACCTATAATCCTAGCACTTTCGGAGGCCTAGGTGGGCAGATTGCCTGAGCTCAGGAGTTCGCAACCAGCCTGGGCAACATGGTGAAACCCCATCTCTACTAAAAATACAAATAAATAAATAAATAAATAAATAAATTAGCTGGACGTGGTGGCATGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGATTCAGGAGAATTGCTTGAACCGGGAGGCAGAGGCTGCATTGAGCCGAGATCGCACTATTGCACTCCACTCTGGGCAACAGAGACAGACTCCATCTTCCCCCCGCCGCAAAAATAAATAAATAAATAAATAAATTAGCCAGGCATGGTGGCACACGCCTATAGTTCTAGCACTTGGGGAACTGAGGTGGGAGGATCACTTGAGCCCAGGATGTCAAGGCTGTAGTGAGCCATGATCATGCCACTGCATTCCAGCCTGGGTCACAGAGTGAGACCCTGTCTCAAAAAAAAAAAAAGTATTTAATACACCTAACCTACTGAATATCATAGCTTAGCTTAGCCTACCTTAAATGTGCTCAATCAGAATGCTTACATTAGCTGGGAAAAATAACACAAAGCCTATTTTAGAATAAAGTGTCGAATATATCTCATGTAATTTATTGATGTTCTACTGAATGCATATTGCTTTTGCACCATCATAAAGTTGAAAAATTGTCAGTCAAACCATTGTAAGTGGGGACCATCTGGTTCCTTGAGCTGTGGTTAGACTGTGCCTCTGCTGTGTAGGCGTGTGATGCTGAAAAGCAGCAGAAATTGAGAGTCTACAGGAGCACTGGCCGTTGGAAATAAAATGCAAGCTACATAATGGTTGGGGTCTTGGTCACTTGCTTCTGCAGAGCCCAAAGCCCAACTCCCTACTCACTTTTGAAGACCAGGGACATTTTCCTTATGCCCCCACAGTCCAAAACACGGTGCCAGGCACACTGTGGTCATTCAGTGAACACATGAAGGGGACATGAATGCAGATCTCCAGGACCGAATGTGGCACCAAGAAGCGTGACTCAGCCCTGCTCAGGGCCTGAGACCCCTCCTGGGTTAAGGTATTGAAAGCTCCTCTTGTTGAGCACATAATTCATATGTGGCAGACACCATTACCTGGTTTCCTAATAGCCATTGCCCCCTTCCCTGCCAACTGAAACCCAATATTGTTTGGGCATCAATGAACCTGGCCCCAGGAGAAGGATCTTATTCCCTTTGCTTTCCCAGCGTCCCTTGCAGCTAGAAGTAGTCAGATAACCTAGTTCTAGCCACTGAGATATGAAGAGAAGTCGGCCTTGAGGATTTGAGGAAAGATAAGAAGAGGGTATGGTCCAGGTGCCATGGTTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACCTGAGGTAAGGAATTCAAGATCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATGCAAAAAATCAGCCAGGCGTGGTGGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAAGCAGGAGAATCGCATGAACCCAGGAGGCAGAAGTTGCAGGGAGCCGAGATCGTGCCACTGCACTCTGGCTTGGGCAACAAGAGCAAAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAGGGTATGCAAGAAGAAACTCTCTGCTCCTTCTCCCGCCTTCCCAGCTGCCAGCTACTCCATGCTTCCTGCCTTCGAATACGGTGAGAACGTGAAGTCATGAGCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCACCAAAAGAATGCCAGCACTTCCTGTGTCTTTGCTTTGGATTCATGAGAAATATACGTTCCTATTTGCTTCAGCCATAATTACTTGGGTTTTTCTGCTACTCACAGTTGAATGCAATCCTAACTCATAAGCCTGTGGTTACAGGAGGATTCATTGATCACAGAACTGCAAGATCCTGGGGCTGGGACGACATCGAAGTTTCATTCAGTTCACTGTCCCTCACTCTCTGTGGGAATCTCCTCTCTAGCATCTCCACCGAGGGGTCAGTGAGCTTCCACCTGCGTACCTGGATGATGGGCACCTCAGTACTGCCTAAGGTAACTCATGTTTGATGGCTCCAGGGGATATACAATTTTTATATTAAGGCAAAATTAAATTCCTTGCAGTTTCCACCCATTTTTCTTAATGCGAATAATTGGGAAAGAAAAAGGAATCATAAGGCCGGGCACGGTGGCTCATACCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGTGGATCACCTGGGGTCAGGAGTTTGAGACCAGCCTGGCCAACACGATGAAACCCCGTCTCTACTAAAAACACAAAAATTAGCCGGGCGTGGTGGTAGGCGCCTGTAATCCCAGCTACTAGGGGAGGCTGGGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCAAGAGATCACTCCGCTGCACTCCAGTCTGGGCAACAGAGAGAGACTCTGTTTCAAAAAAAAAAAAAAAAAAAGGAATCATAGAAGCAGGGCAGTGGAGTTAGATGGTAGAGTGCCAACATTTTCTGATTATGTGACATTGGGCAAGCTCCTCTCTGAAACTTGGTCTCTATCTATAAAGTGGAGATGAGAAATTCTCCCTCCTGGGATCCTTGTGAGCATTTGCTGGCAGAGAGTAAGCTCATAGCAATTGAGAGTGGTCTGACCCCTTAACACATGAGTTGTGTCAGCTAGCTGTCATATTTGAGAATTGTGTCCAGAAAAGAGGTGAGAGCCCAGGATTCTGATGCCTCTGATGCAGGGTGACGAACATGGGCCATTAAAACTCCTTACCCACAAGTGTGTGTGTGTGTGTGTGTGTATGTGCGCGCGCATGCACATGTGCCCGCTTGTCTCTTTGAGAACCGGAGGGACAAGGAGGGCATCCCAGGTAGGTGTGACTTCTCCCCAGAAATGGAGGGTTTCCTAGGCTGGCTGGGTCTCCTTCACAGCTTTGTCTTCAGTCTCCAATCTGTTTGGCCACAACTTCTTCAGCCCCAGACCCATCCCTTGTTCTTCTGACCTGCCTGAAGCCTGCCCTGGTGGACCAAAGGCCTGATGCAACTTCAGAGAAGATGCTGAGTCAGAAAGAATATGCAGGAGACCGGGAAAGGTTTGCAGGAGGCCTTTAATTGTGAAGAGCGCAATCAGAAAACAGATATGCTGGTCAAGGAGGTGGCCAGCCCGGGAGATGCGCTGGAGCAGGGGAGAGATGCCCCTGCGCCTAGTGGCCTACAGCATTCTGGGCTAGGTGTGGGAGTGGGTGGGCAGTCTCACTGCTTGGAGCGTCCAGCGTCATGGCAGATGCCAAAGTTGGTGTTGGTGATGGAGCCCACGATGGTCTTGTCTCCCTCACAGGTCAGGCCACGCTCACAGGGACACTTGTAGTAAATCCCATAGAGCGTCTGCAGAGACACAGCCAATGGAGTCAAGGCTATGGGGAGATACTTTGGACATCACTTGTCCCCTGCCTGACCTAGAGAACCAGTAGGCCAGCCTGTGTTTTCGGGGAGTGCCTCTCCCACCTGCCTCCCCAGGGGTGCCGTGGGCCCTGGAGACCCCAGCTCTGACCTCTGCTCTGGCTCATTTGCTCTTACTAGCTTGATCTCTCTGGGGAGCCTCTATTTACCCAGCCATGAAATGGGGATAACAAATCCCCACCCCACCCATCTCACTGGTCACTCGGGAGGGTCAAGAGAGATGATGGGATGGGAAAGTGCTTTGACACCTGTCGACCTCCCTCTCGTCTCCTCAACATTCAGTGTCCAGGCTGACCCCCCTCCCTGATCCCACTCACAAGTGTTCAGGGCCCTACTCCCCATTCTCCCCCACCCACGCCAAGTCCTCAGGCACCCACCTTGACAGAGCACTCGCTGTTCTCGCTGGCCATGGATGTGCAGCGGGCCAGGCCCAGCGCACTTGAATGCTGGCAGCAATTGCTCTTACACTGGGCACTATTCATGCAGAGCTCACCGTTCTCCTGCCAGGAGCAGCCAGTCAGCCCAGGCCCCACTCCCTCAGGTCCCTTCTCCATTCAGACCTGTACCCACCACACACTACCACTAACAGTGTCTCCCTGGTAGGGATGTGTGTGAAGGAGTCCATCCCCTGGGTCTGGTGGCCTCTGTGCCCCCCACCCACGTGAGAAGTGGGCATGCGGTGACAGAGAAGCAGACTTGCACAGAGGGTCAGGACCCCTGGGTTCTAGTACCGGCTGTGCTACCAACCTCCTGTGTGACTCTGGGCAAGTCACTGCCTCCCAAGCCTCAGTGTTCCCATTTGGAATGTGCACACAAGGCCCCTAGACAAGTTCTCCAAACCACTCTGGGTCCCACACCTCTTTAAGGAGGCGGTGAAGATTGCATCTCCCTGCAAGACTCCTTCCTCCCCCAACAGATCTGATCTATAATCTCCAAGGGTCCTGGACCTCCAAGTCCAGCCATGGCCCCAAGTTAAGAGAGTTCAGAACCTTTCAACCGCATGGACGTTCTGGAAGGGCTTTCCCAGCCAAGACCCATGGTGGAGAGGTGGTGTGGGGCAGTGGTGGGGCCCCAGCTGAACCACTTTCCAGCTATGTGACCTCAGGCAGGTGCTCACCCTCTCTCTGTCTGAAGACAGGGCTGACTCTGAAAACACCTCCCTCAGTGGTTATTATGAGAACAGAATGAGTAAACATCTCCGAGCATCTCCATAAGTCAGAAGCTGGAATGATTGGCACAAAGCATTTTCTCAGGATGGAAGCCCAGGGCTCTGGATTTTTACAAAGCTCCCTCGTAGGGCCAGGTGAGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGTTTGAGACTAGCCTGGGCAACATGGTGAAACCCTGTTTCTACTAAAAATACAAAAAATAGCTGAACGTTATGGCAGGCACCTGTAATCCCAGCTTCTTGGAGGCTGAGGCAGGAGAATCATTTGAACCCGGGAAGCAGAGATTGCAGTGAGCCGAGATTGTGCCACTACACTCCAGCCTGGTGACAGAGCAAGACTCCGTTTCAAAAAGAAAAAAAAGAAAAAAAAGGTCCCTCATAGCCAGGTTGAGCTGCTGCTCTGAGCATGCTCCAGTTGGAGCTGGAGAGGGGCTGATCAGCCTTTCCTGTGGCCTCTGGGAAGAGGCATAGGACAGGACATGGAAGTAAACAGAGGGATGCAAGATGCCACTCCTCCCAGCCCCTGCCAGTCCAGGTGGAGACATCAGAGGTCAAGGTCCAAGCTTAGGAAGTCTTCATCTGGGGACTCAGGAGGCGCCTCCCCTGAAGACCCTCTTACCAGGTTGATAATGATCCCCCGGGGGCCAGGAGCTGCATAGGCCACAGAGAGGGCGACAAGCAGGAGGATCAGGATCTTCTCCATGGTGAGTGGGACAGCTGGTGTGGGTGGCGGGAGACAGAGCCAGCTGTGGTGATGGGGCTATAAAAGGGGCCCTGACCTCACGAGACCCACCTGCATCCCACAGGGCTGGCCGTGGGCAGAGGCACAGCTGTGGCCAATCTGCTGTGGGGCGGTTCCTGATAAGGAAACTGGGTGAGTACCTGGTGGCCTTTTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGTGATAATTGTGTTGCATCGTGGTTAAGAGTATGGACTGTGTACAAGTTATTAGTGAGGCAAACTTACTATCTGTTCCAACTATTCTGCCTTTCATCTTATCTGTCAACTAAGGATAATTTAAAGAGTTGTGAGGGTTGAATTAATACACATTTATATGTGTTACATATATATAAACATTATTATATACAATTATAAGAATATATTTATATTGTATATTCCCATATGCCACATAAGCAGTGGGTAAGGGTGGCTGCCCTTGTGTCTTGAGCTCCTGGGCAGTGCCTGGACGAATCCAAGGCAAGAGAGGCACCTATGGTGTGAGTGCCTGCTTACATTCTGTGTACTTGGGGCCTCTCTGCCTCACTATAGTCAGGCCTTGCCTTTGGCCCACCCAAGCCCAGGTGTCTAGCAGTGTCAGACTCCAGGGACGAGGATCCCAGCCTCCCACCCCTCAACCTTCCTTCAGTCTCCTCGGGGGATTCCAGCCATGCCCAGATCCCTGGGGCTGACAGTTCTGCAACCCCCAGCAGGCCAGGGTGTGTGTGCTTTCACTTTGGCACCCTCCCCCTGCCCTCACACCAGGGGCTGCCTGCAGGCCTGACTCAAGGGCCCTTAGGAGGCCCTTCCTAAATGCCTCTCTCCCCTTTCCTTTCTACCTCACTTACTATCTGCAATTCCAGCATCAGATACTCACCCCTTTAGTTAAGGTTTCCACTCACGCTGCCCCCTACCCAAGGCCACGTGCGCGCGTGAGCAGTCGCTAGTCCTGGCTGAGAATGAAGAGGTCTCATGAGCCTCAGATGGAGCAGGGGCCTCAGGAAGCTGGGAAGGGCACAGCTGCCTGAGTTTGCTCAGGCATGGGAACAGAGCAGCTTTTCCTGAAGGACTAGTCATGGCAGCCAGAGGCCCCTGCCCTTCCCCTCTCCATCCCAGGAGGTAGAAGACAGCTCCACTGAGAGGCCCAGGCCTCAAGCACAGCTTTTAATTTAATTTAATTTAATTTTTTGAGACAAGGTCTCACTCTGTCACCTAGGCCGAAGTGCAGTTGTGCCATCTTGGCTCACTGCAGCCTCCACCTCCTGAGATCAAGCAATCTTCCCCCTAAGCCTCCCAGGTCTAAAACTCGTGGGCTCAAGCAATCTTCCCACCTCGGCCTCCTAAAGTGTTGGGATTACAGGTGTGAGCCACTGTGCCCAGCCTCAAGCACAGCTTTGATCCAGACCAAGCTGGCTTCAAAATTCAGCATTTACTGGAGCTACGTGGCCTCAGACACATTATTGAAAGTGAAGCTCCCTGAACCTCACTTTCCTTATTTATCTTAGGGGGATAACGCCTCCTACTTCCTGAGGTCATGATTAAGACAATGCACGTGGAACACCTTCGGAAGTGCCTGGCACATGGCGGGTGCCCAGCCATGTAATATGACCCCCTTCCTCTCACCTTTACATCCCTGGGGTGTGGAATGTAGAGAAATAGCTGGAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10155:HG2_PB_HySA_12504:HG2_PB_SVrefine2PBcRplusDovetail_9443:HG3_PB_SVrefine2PBcRDovetail_3103:HG4_PB_SVrefine2PBcRDovetail_3389:HG4_PB_SVrefine2Falcon1Dovetail_4089;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_3103;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00360228;ClusterMaxSizeDiff=0.00352041;ClusterMaxEditDist=0.0136723;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=12211;DistBack=25033;DistForward=29223;DistMin=25033;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1097;REFWIDENED=6:35754559-35755658;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4638.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:1/1:0/1:12:35:./.:7:6:5:17:./.:0:0:0:0:./.:0:7:0/1:29:180:.:.:.
chr6	40705624	HG4_Ill_SVrefine2DISCOVARDovetail_5051	C	CTCTTCCCTCAGACTGGGGCTCCCTGAGGATGGAGCTGTGTCTCCTCAATCAGACTGGGACTCCCTGAAGATGGGGCTGCATCTCCCCTCAGACTGAGGCTCCCTGAGGACAGGGCTGTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11092:HG4_PB_HySA_10055:HG3_PB_pbsv_6629:HG4_Ill_GATKHC_11424:HG4_PB_pbsv_6819:HG4_Ill_GATKHCSBGrefine_4814:HG4_Ill_150bpfermikitraw_9141:HG3_Ill_GATKHC_11337:HG3_Ill_GATKHCSBGrefine_4695:HG3_Ill_150bpfermikitraw_8978:HG2_Ill_GATKHC_11363:HG2_Ill_GATKHCSBGrefine_4756:HG2_Ill_150bpfermikitraw_8927:HG2_PB_PB10Xdip_25640:HG2_PB_PB10Xdip_25639:HG2_PB_HySA_12551:HG2_PB_pbsv_6812:HG4_PB_SVrefine2PBcRDovetail_3404:HG4_Ill_SVrefine2DISCOVARDovetail_5051:HG3_PB_SVrefine2PBcRDovetail_3121:HG3_Ill_SVrefine2DISCOVARDovetail_5147:HG2_PB_SVrefine2PBcRplusDovetail_9458:HG2_PB_SVrefine2PB10Xhap12_4969:HG2_PB_SVrefine2Falcon2Bionano_3409:HG2_PB_SVrefine2Falcon1plusDovetail_10172;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11092:HG4_PB_SVrefine2PBcRDovetail_3404:HG4_Ill_SVrefine2DISCOVARDovetail_5051:HG3_PB_SVrefine2PBcRDovetail_3121:HG3_Ill_SVrefine2DISCOVARDovetail_5147:HG2_PB_SVrefine2PBcRplusDovetail_9458:HG2_PB_SVrefine2PB10Xhap12_4969:HG2_PB_SVrefine2Falcon2Bionano_3409:HG2_PB_SVrefine2Falcon1plusDovetail_10172;NumExactMatchSVs=9;ClusterMaxShiftDist=0.092437;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.347107;PBcalls=13;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=119;DistBack=82695;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=578;REFWIDENED=6:40705625-40706202;PctSeqSimilarity=0.9709;PctSizeSimilarity=0.9748;PctRecOverlap=0;SizeDiff=3;StartDistance=-329;EndDistance=-329;GTMatch=0;TruScore=64;MatchId=4651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:80:1/1:6:45:2:19:./.:0:0:0:0:./.:20:2:./.:.:.:.:.:.
chr6	44149159	HG3_PB_SVrefine2PBcRDovetail_3136	A	ACACACACACACCCAACCACACCACACTCACACACACACACACACACACTCACATACACAACCACACCACACACACACACACCACACTCACATACAGACACAACCACACCACACACACACACACTCACATACACAACCACACTCACACACACACACACACACAGACACAACCACACCACACACACACACACTCACATACAGACACAACCACACCACACTCACTCACACACATACACACTCACATACCACAACCACACCACACACACACATACACACACTCACATACAGACACAACCACACCACACACACTCACACACCACACACACTCACATACAGACACAACCACACCACACACTCACACATACACACTCACATACAGACACAACCACACCACACTCACACACACACACACTCACATACAGACACAACCACACCACACACACACACACACACTCACATACAGACACAACCACACCACACTCACACACACACACACTCACATACAGACACAACCACACCACACTCACACATACACACTCACATACAGACACAAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9472:HG3_PB_SVrefine2PBcRDovetail_3136:HG2_PB_SVrefine2Falcon2Bionano_3423:HG2_PB_SVrefine2PB10Xhap12_4984:HG4_PB_SVrefine2Falcon1Dovetail_4125:HG2_PB_SVrefine2Falcon1plusDovetail_10186;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_3136;NumExactMatchSVs=1;ClusterMaxShiftDist=0.199346;ClusterMaxSizeDiff=0.199346;ClusterMaxEditDist=0.241239;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=553;DistBack=3;DistForward=26;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=925;REFWIDENED=6:44149160-44150084;PctSeqSimilarity=0.9424;PctSizeSimilarity=0.9651;PctRecOverlap=0.1047;SizeDiff=-20;StartDistance=-503;EndDistance=-503;GTMatch=1;TruScore=67;MatchId=4656.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:2:13:1:24:./.:0:0:0:0:0/1:5:4:./.:4:48:.:.:.
chr6	50287230	HG3_Ill_svaba_8943	A	ATATATATATATACTATGTGTGTATATATATATATATATATATACTATGTGTG	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9026:HG3_Ill_svaba_8943:HG3_Ill_250bpfermikitraw_9303:HG3_Ill_150bpfermikitraw_9076:HG2_Ill_svaba_8866:HG2_Ill_250bpfermikitraw_9613;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9026:HG3_Ill_svaba_8943:HG3_Ill_250bpfermikitraw_9303:HG3_Ill_150bpfermikitraw_9076:HG2_Ill_svaba_8866:HG2_Ill_250bpfermikitraw_9613;NumExactMatchSVs=6;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=52;DistBack=67037;DistForward=95;DistMin=95;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=192;REFWIDENED=6:50287174-50287365;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4667.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:25:0|1:19:1:6:22:./.:0:0:0:0:0/1:16:13:./.:.:.:.:.:.
chr6	97430443	HG2_PB_SVrefine2Falcon2Bionano_3591	G	GTGTGGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGTTCTCTGTTTGTCTGTTACTGGTGCATAAGAATGCTTGTGATTTTTGCACATTGATTTTGTATCCTGAGATGCTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTTCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCACAACTTCCAACACTATGTTCAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCCGTGGGTTTGTGATAGATAGCTCTTATTGTTTTGAGATACGTCCCATCAATACCTAATTTGTTGAGAGTTTTTAGCATGAAGCGTTGTTGAATTTTCTCAAAGGTCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCATTGGTTCTGTTTATATGCTGGATTATGTTTATTGATTTGCATATGTTGAACTAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTCTTGATGTGCTGCTGGATTTGGATTGCCAGTATTTTATTAAGGATTTTTGAATTGATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTTGTTGTGTCTCTGCCAGGCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTTAGAAGGAATGGTACCAGCTCCTCCATATACCTCTGGTAGAATTCAGCTGTGAATTCATCTGGTGCTGGACTTTATTTGGTTGGTAAGCTATTAATTGTTGCCTCAATTTCAGAGCCTGTTAATTGGTCTATTCAGAGATTCAACTTCTTACTGGTTTAGTCTTGGGAGGGTGTATGTGTCAAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGTGTAGAGATGTTTATAGTATTCTCTCATGGCAGTTTGTATTTCTTTTTTTTTTATACTTTAAGTTTTAGGGTACATGTGCACAATGTGCAGGTTAGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTTGTCATTTAACATTAGGTATATGACAAGATTGACTTGGTCTATATCTCTGTTTTGGTACCAGTACCTTGCTGTTTTGGTTACTGTAGCCTTGCAGTATAGTTTGAAGTCAGGTAGCATGATGCCTACAGCTTTGTTCTTTTGGCTTAAGATTGACTTGGCAATGCGGACTCTTTTTTGCTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGGTGGCATTGAATCTATAAATTACCTTGAGCAGTATGGCCATTTTCATGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCATTGAGCAGTGGTT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3525:HG3_PB_pbsv_6920:HG4_PB_pbsv_7125:HG2_PB_pbsv_7127:HG2_PB_PB10Xdip_26216:HG2_PB_PB10Xdip_26217:HG2_PB_HySA_13187:HG4_PB_HySA_10519:HG3_PB_SVrefine2Falcon1Dovetail_4310:HG2_PB_SVrefine2Falcon1plusDovetail_10377:HG2_PB_SVrefine2PB10Xhap12_5207:HG2_PB_SVrefine2PBcRplusDovetail_9657:HG2_PB_SVrefine2Falcon2Bionano_3591:HG3_PB_SVrefine2PBcRDovetail_3295:HG4_PB_SVrefine2Falcon1Dovetail_4301;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3591:HG2_PB_SVrefine2PBcRplusDovetail_9657;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0505789;ClusterMaxSizeDiff=0.0499695;ClusterMaxEditDist=0.195461;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=1613;DistBack=70742;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1142;REFWIDENED=6:97430444-97431585;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9963;PctRecOverlap=0.4107;SizeDiff=-6;StartDistance=-951;EndDistance=-951;GTMatch=1;TruScore=79;MatchId=4735.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:103:1/1:0:30:0:32:./.:0:0:0:0:./.:0:4:./.:16:162:.:1553:.
chr6	106271640	HG2_PB_SVrefine2Falcon1plusDovetail_10403	A	AATATATATATACATATATGTGTGTATATATATGTATATACATATATGTGTGTATATATATGTATATACATATATGTGTGTATATATATGTATATACATATATGTGTGTATATATATGTATATACATATATGTGTGTATATATGTATATACATATATGTGTGTATAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10403:HG2_PB_SVrefine2Falcon2Bionano_3614:HG2_PB_SVrefine2PB10Xhap12_5233:HG3_PB_SVrefine2Falcon1Dovetail_4342:HG2_PB_HySA_13273:HG2_PB_SVrefine2PBcRplusDovetail_9682:HG2_PB_pbsv_7171;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10403:HG2_PB_SVrefine2PBcRplusDovetail_9682;NumExactMatchSVs=2;ClusterMaxShiftDist=0.273292;ClusterMaxSizeDiff=0.273292;ClusterMaxEditDist=0.341935;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=166;DistBack=69835;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=511;REFWIDENED=6:106271641-106272151;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.988;PctRecOverlap=0;SizeDiff=2;StartDistance=-327;EndDistance=-327;GTMatch=1;TruScore=65;MatchId=4750.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:60:1/1:5:16:2:28:./.:0:0:0:0:0/1:11:26:./.:.:.:.:.:.
chr6	158769743	HG3_PB_SVrefine2PBcRDovetail_3377	C	CTCCCAGATGGGGCGGCTGGGCAGAGGGGCTCCTCACTTCCCAGATGGGGCAGCTGGGCAGAGGCGCTCCTCACTTCCTATACGGGGCGGCCGGGCAGAGGCGCTCCTCACCTCCCAGACAAAGGGCGGCCGGGCAGAGGTGCTCCTCACTTCCCAGATGGGGCGGCCGGGCAGAGGCGCTCCTCACCTCCCAGACGAAGGGCGGCCGGGCAGAGGCACTCCTCACCTCCCAGATGAAGGGCGGCCGGGCAGAGGCGCTCCCCATT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_4516:HG4_PB_HySA_11023:HG2_PB_HySA_13796:HG2_PB_HySA_13795:HG2_PB_PB10Xdip_24792:HG2_PB_pbsv_7443:HG4_PB_pbsv_7452:HG3_PB_pbsv_7204:HG4_PB_SVrefine2PBcRDovetail_3677:HG3_PB_SVrefine2PBcRDovetail_3377:HG3_PB_SVrefine2Falcon1Dovetail_4468:HG2_PB_SVrefine2PBcRplusDovetail_9837:HG2_PB_SVrefine2PB10Xhap12_5406:HG2_PB_SVrefine2Falcon2Bionano_3627:HG2_PB_SVrefine2Falcon1plusDovetail_10575;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10575:HG2_PB_SVrefine2Falcon2Bionano_3627:HG2_PB_SVrefine2PB10Xhap12_5406:HG2_PB_SVrefine2PBcRplusDovetail_9837:HG3_PB_SVrefine2Falcon1Dovetail_4468:HG3_PB_SVrefine2PBcRDovetail_3377:HG4_PB_SVrefine2PBcRDovetail_3677;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0490566;ClusterMaxSizeDiff=0.0371747;ClusterMaxEditDist=0.248588;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=265;DistBack=11659;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=577;REFWIDENED=6:158769744-158770320;PctSeqSimilarity=0.9681;PctSizeSimilarity=0.9962;PctRecOverlap=0;SizeDiff=1;StartDistance=-378;EndDistance=-378;GTMatch=0;TruScore=65;MatchId=4836.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:53:1/1:5:17:2:23:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr6	159027144	HG3_Ill_SVrefine2DISCOVARDovetail_5713	T	TGCTGGAGCGAAGGGCGTGGGCGCTAGAGCCACAGGGAGCTGGAGGGAAGGGCGTGGGCGCTAGAGCCACAGGGA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11624:HG3_PB_pbsv_7207:HG2_PB_pbsv_7447:HG3_PB_HySA_11429:HG4_PB_pbsv_7457:HG2_PB_PB10Xdip_24796:HG4_Ill_GATKHC_12545:HG3_Ill_GATKHC_12465:HG3_Ill_150bpfermikitraw_9917:HG2_Ill_GATKHC_12488:HG2_Ill_250bpfermikitraw_10487:HG2_Ill_150bpfermikitraw_9884:HG2_PB_HySA_13800:HG4_PB_SVrefine2Falcon1Dovetail_4518:HG3_PB_SVrefine2PBcRDovetail_3379:HG3_PB_SVrefine2Falcon1Dovetail_4470:HG3_Ill_SVrefine2DISCOVARDovetail_5713:HG2_PB_SVrefine2PBcRplusDovetail_9840:HG2_PB_SVrefine2PB10Xhap12_5410:HG2_PB_SVrefine2Falcon2Bionano_3630;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11624:HG4_PB_SVrefine2Falcon1Dovetail_4518:HG3_PB_SVrefine2PBcRDovetail_3379:HG3_PB_SVrefine2Falcon1Dovetail_4470:HG3_Ill_SVrefine2DISCOVARDovetail_5713:HG2_PB_SVrefine2PBcRplusDovetail_9840:HG2_PB_SVrefine2PB10Xhap12_5410:HG2_PB_SVrefine2Falcon2Bionano_3630;NumExactMatchSVs=8;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.27673;PBcalls=12;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=74;DistBack=34533;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=193;REFWIDENED=6:159027145-159027337;PctSeqSimilarity=0.9856;PctSizeSimilarity=0.973;PctRecOverlap=0;SizeDiff=2;StartDistance=-169;EndDistance=-169;GTMatch=0;TruScore=65;MatchId=4838.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:67:1/1:4:16:0:31:./.:0:0:0:0:0/1:20:5:./.:.:.:.:.:.
chr6	160547092	HG2_PB_HySA_13839	T	TTTTCCTGGCTTTTGACTCTCCCAACAAGGAGGATCTCCTCTGGTGCTAAGATCATGAGGTCCACTCGGGGGATGTGGGCA	10	PASS	ClusterIDs=HG2_PB_HySA_13838:HG3_PB_assemblyticsfalcon_23797:HG4_PB_assemblyticsfalcon_23355:HG2_PB_assemblyticsfalcon_23959:HG2_PB_HySA_13839:HG4_PB_HySA_11053:HG2_PB_pbsv_7468:HG3_PB_HySA_11457:HG3_PB_pbsv_7229:HG2_PB_PB10Xdip_24817;NumClusterSVs=10;ExactMatchIDs=HG2_PB_HySA_13839;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.285714;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=80;DistBack=365;DistForward=8189;DistMin=365;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1808;REFWIDENED=6:160546393-160548200;PctSeqSimilarity=0.9881;PctSizeSimilarity=0.9756;PctRecOverlap=0;SizeDiff=-2;StartDistance=505;EndDistance=505;GTMatch=0;TruScore=65;MatchId=4845.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:30:1/1:2:7:2:7:./.:0:0:0:0:./.:3:0:./.:.:.:.:.:.
chr6	165195472	HG4_PB_SVrefine2Falcon1Dovetail_4565	A	ATTTTTTTATTATACTTTAAGTTCTAGGGTACATGTGCACAATGTGCAGATTTGTTACATATGTATACATGTGCCTTGCTGGTGTGCTGCACCCGTTAACTCCTCATTTACATTAGGCATATCTCCTAATGCTATCCGTTCCCCCTCCCCCGACCCCATGACAGGCTCTGGTGTGTGACATATTTCTCCCTGTGTCCAGGTGTTCTCATTATTCAATTTCCACCTATAAGTGAGAACATGCGGTGTTTGGTTTTCTGTCCTTGCAACAGTTTGCTCAGAATGATGGTTTCTAGCTTCATCTGTGTCCCTACAAAGGACATGAACTCATCCTTTTTTATGGTTGCATAGCATTCCATGGTGTATATGTGCCACATTTTCTTATTCCAGTCTATCATTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCAGCAATAAACATACATGTGCATGTGTCTTTATAGCAGCATGATTTATAATCCTTTGGGTGTATGCCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCATGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGCATAAAAGCATTCTTATTTCTCCACATCCTCTCCAGCACCTGTTTCTTCCTGACTTTTTTATTTATTTTTTATTTTTTTATTTTATTATTATTATTATTTTTAAGTTTTAGGGTACATGTGCACAATGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTTATCTCCTAATGCTATCCCTCCCCTCCCCCACCCCACAACAGTCCCCAGAGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCATCTATGAGTGAGAACATGCGTGTTTGGTTTTTTGTCCTTGCGATAGTTTACTGAGAATGATTATTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGGATAGTGCCGCAATAAACATACGTGTGTGTGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCACATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTTTAACTGTGTGGGATGGTATCTCATTGCGGTTTTGATTTTTTTAATGACCATGTGTCCAGCAACCTTGTTAATTCTAAACATGAATTTTAAATAGTTTGTTGATTCTTTGGATGTTCTAGATATATCATCACATTGTCTGCAAATAATGACAGGCTTGATTTCACCTTTAAAATTTATGTGGAATTTTTTTAAAACCTTGTAACAGAGACTAGATAATTCAGAACATTGTTGAATAAGAAGAATAACAAGCATCTCTTCATTTTTCTTGATCTAAGAGGTGGTACTGGGATGTTTTCAGTATCCCAGCATTGAAAATCATGGCTTTATTAATAGTTTTTTCTTTTCAATTAAAAATGTACTCTCCTTTGAGAGGCCAAGGTGAGAAGATTGCTTGAGCCCAGGAGTTTGAGACCAGCCTAGGCAACATAGTGAGATCTCATCTCTACAAAAAAATTTAAAAATTAGCCAGGTGTGGTGACACATGCCTGTAGTCTCAGCTAATTGTGAGGCTGAGGGAGGAGGATTGCTGAAGTGAGCCACGATCACGCCACTGTACTCCAGCCCTGGCTACAGAGTGAAACCCTGCCTCAAAATTATTAATTAATTAGTTAAATAATTTAAAAAGGACTCTCATATTATTAGTTTAATAGTAATTTTTAGTAAAGAATGGGTATTGATTTTTTAATGTTTTCTGAAATTATCTAGATAATATGGTTGTTATGACTTTGATTCTTAATGTGGTTAAAGAAAACATTGATTGATAACCAATTGTTATCCAACTTTAGAGTTTTATAATAAGCCCTACTTGGTTGTGATGCAGCATCCTTTATATGTATTATGGAATTTAAGTTTCTAATATTTGTTAATGTTTGAGAGAAATTAGTTAGAAATTTTACTTTTTATGTTGTGCTTGTCATGTTTTATAGTAACGGTTATGCTTAAGTCCTAAGAAGGTATGGACACATCCATGTTATTTCTGTAGCAGTTCAGAGTAAATAAAAATTACAGATGGTCCCTGACTCCCTGACTTATAATGGTCAGTATTCAGTAGAAAATGTAGCTTGAGTACTCATATAATCCTTCCACTTCCACCTTTAGCTATAGTATTCAATAAATTTCGTGAGATCTTCAACACTTTATTATAAAAAGGCTTTGTGTTATATAATTTTCCCAACTGTAGGCTGATTGTAAATGTTCTGAGCATATTTAAGGTAGGCAAAGCTAAGTTACGATGTTCCATAGGTGAGGTGTATAAAATGCATCTTTAATTTACAACATTTTCAACTTACAATGGGTTTATTGTGAGGTAACACCATTGTAAGTCAAGGAGGATCTGGATATCCATATACTTGACCCTTTTGTATCCACGCTGGTTTTGTTTGTTTATTTTATCCATTCTTTAAAGAAGGGCTTTACATTTCCAACTATGAATGTGCTTCCAGTTAAATTTCCAGTTTTATTGTTTAAAAATGTCTTCCATTGTATTTTATACACAATAGTTCTTCCCATTGCTTTTGTCTGATATTAATGTACCATGCCATTTTTATGCTTACTCTCTCTATGGTATATTTTTCATATTTTTAATTTTAGTACACATGTGTCTATAAATTTTAAATGTCTTTTTTAGCCAGAATATAGTAAGTGATTTTATCCCATCTGGCACTCTCTGTGTTTAATTGGTATATTTAATTAACTGACATTTAATATAATTATTGATATGATTATGTTTAAGTGTAAATTGTATCATTTTTCATTTTTTTCTATGACTTTTTTTCTCTCTTACTCCTTTTTTGCATCTCTGGTGATTAAATATTACTTTTGCACTCCATTTTATTTACTGAAAGTACTATTGGCTACCTCTCATTTTACTCCTTTTATAAATGATTGACTTAGGCATATGATATGCAAAGTTAGGCATATTATATTCGAAACGTATCATTTAACAAAGTCAGTAGCACATCACACATTGGCGTTTCCCATGTCCTACTTCACACTTCTCAGTTCACATCTGAAAGTTGCTTTTATCTCTCAACTCACACTTAAAGCTTCAATTTCCTACTTTACAAATGCAATGAACTGACAATGGTTTAATTTCATTCCCATATTATAATTGGTGCTAATGTTGTGATATTTTTCTTTTATATGAGCTATCTCAGATTTATAATTTTTGTTTTAGACAATTAGATACCTTAAGTAAAATTATGAGAAGTAAAAACACACAAACAAACGTACATGTATCAATTTATTTACTTTTGGTTTTGCTCATTTTTACTGAAAATATGATTATCTATGTGGTGTCATTATTTTTCATCCCAAATAACTTCATTTTTACATAGTGTAGTCCAGCTGGAAACGTTTATTTCATGTTTATCTTTTAAATGATATTTTCACTGGATACAGAAACCTGAAATACAAATTATTTAATTAGACAATAAAAAATAGTAGAATAAATCAAGAAGTTCAAATGTTGTTTTATTTTTAACTCAGCAGAATACATAAATATTGACTCAAATAATAGGAAGGAATGGAAGCATACATTCTCAATAAGAAAATGACAAGGAGTAAATAACTACCAAATGAAGGAAATTCTAATACATTATAAGAGATTTCTTTTATAATAATGTAAGAATAAAATTTTTAAAAACTTAAATGAAGTGTATCTTTTCCTACACAAACATTGTTATCTAGATTTATGCCAACAGAAATATATATATATATAATATTTGACATGTTTATTATTGTTAAATATCTTTTATACCTGATAATATTCTTTTTTTAGAAATCTACTTTTTAAATGTTAATATAGCCAATCTAGCTTTCTTTGGTGTTTGTATGGAATATCTTTCTCCACTGATTTACTTTCAATCTGTATTTAAGTGGATGTTTATTTATTTATGGTAGAGTTCTTATAAAATATATATAGCTGGGTCTTGCTTTTAATAAAATCTGAATTATTTTTAACTGGTAGGTTCAAATCATTTGCATTTAATGTGATTATTCATATCTTGGATTAAAATCTATCATGCTGCTTAGTATTTTCTATTTTCCTTTTATTATTTTTTCCTTGTTTCCTCTTTTATACCTTCTTTTATATTATATGATTTTTTAAATTACTGTATTTTTAACTTCATTTATGCTTTATTTCTTACTCTGCTCTTCAAAATTTTATTGAGTATACTAGCATTTATAATATTAATCTGTAAGTAATCACAATCTTTCTTCAAATAATATCACAGTGCTTCATACATAATGTACAAAACTCATAACAATATCATCCCAATTCCCCCTCCCAAGCTTTGTGCTATTGCTTTCATACATTTTATTTTACATATAGAAACAAACAATATGTTGGTATTATTTATTCTATACACAGTCAGTTATCTTTTAGATTGATAAAAAGAGAAAAAATGAATTGTATAATCATTTCAATTTTACAACTTTCTTACTGCAATGCTTGTGGCTATATGACATCTTATTCTTTCTGCCTGAAGAGCTTCCTTAACCAATTTTACTAGTGAAAATTCAATAATATGAGATCTTTCTGTTTTTGATTTTTTGAAAAGCTTTAATGTCCTTTTGATTTCTAAGACATATTTTTTGCTGAATACAGAATTCTAGTTTGAGGTTTTTTTTTCTTTCAGCATCATTAAAAAAATGTCACTCATTGTCTTCTGGTATACATAGTATCTAATAAAAAGTCTGCTGTAATATTGATCTTTGACAACTGTAAGTAATGTGTCTTCTGACTGGCTGTATTTAATATTTTCTACCTGTATCTTTGTTTCTTGCTGATATTATGTGACATTCTTGGATGTGTGGTTTCATATCTTTCATTTTGATAAAAAAAAACAATCATTATTTTTTCAAATATTTTTTCTGCCTCATTCTTTCTTATCTTTATCTGGGATCTCAATTACACAAAAGAAGTTAGACCCTTTGTGTTATTGTGTTATTTCACACATCTTCTGTAGTCTGTTTTTTTGTTTTTGTTTTTTTGACAGAGTTTTGCTCTTGTTGCCCAGGCTGCAGTACAATGGTGTGATCTCAGCTCACTACAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCTTACTGAGTAGGTGAGATTACAGGCATGTGCCACCACACCCCACTAATTTTGTATTTTTAGTACAGACAGAGTTTCACCATGTCGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCTTACCTCTGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCCAGCCAGTTCTTTTTATTTTTTTAATTTTTAATTTATTTTACCTTCACCTTGTTTTTTAAATTGTGTCATTTCTATTGTACTATCTTCAAGCCAATGATTCTTTTTTCAAATATATCAAAATTTTATAATAAGATCATCAGGCATTTTTAAATGTCTGTTACTATATTTTATTAGATTACCTTAGTTTTTCATCTGTGTTTTTTTTCTGAAGAGCACCATGTATTCCTATTGTCCTTTTCCATCATATCAGAGGTTGGTAAACTATAAGCCATAGACCTTTCAGCTGTTCTCATAAATAAATTCTTATTGGGATACAGCCCTGTTCATTTATTTATGTTTTTATCTATGGATGTTTTTAGCTTAATGGAAGGGTCAAATAATTGTGGCATGTGTTGCATGGCTCTCCAAACTAAACATGTACTTCTCCTTGAAGAAAAATTTTACCAAAACCTGCACTAAGCTAACTACTACACATATGAAGAAAGCCATTTAAGACCAATGAGACCTTAGCCAAGTGTTTGTTAGAACTTTCAGCCTATCCTTGCCTTGCAGTATTATTAATTAAGTAAATGTGTAATGATTTGGTTATGCAGCACAATCTGGCTGGTATACCCAATGAGCAATAGTCAGATCACAAAAGTTAGAAAATCAAGCATTTACAATGAAGTAGAAAGTAAAACAACACGAATTGTGGGCCAGGCACGGTGGCTTACACCTGTAATCTCAGCACTCTGGCAGGCCAAGGTGCACAGATTACCTGAGATCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAAATACAAAAATTAACTTTGTGTGGTGGTGGGCACCTGTAATCTTGGTTACTTGGGAGACAACAAAAAAAATAAGAAGTTTTTGTGTGTTGAAAAACCACATTTTTTAAATGAATAAATGGACTAGTGGAATAATAGAATGAACTGACATGGATAAAAGAGACTTAAGAGACCTATCATCCGAATGCAGTGAATAAACTTATTTGAATCCTGGTTCATATGAATTGACTATACAATTATATTTTAAGAAACTGATAAAATTTTATATGAACTTTTTTATAGATTATGATAAAGGAGAATTTTAGTTTGTTAGATGTAATAACAATTTAGGGCTTCTTAAACAAGTCTACCCATTAGAGGTACATACCATATTATTTAAGGATGAAATTATAAACTATATGGGATTTCTTTTAACATATTCTAGCAAAAACAACTGGGTTAATACTTACATAAAAGAACAGAAATATGTGGATAATTGTTGAATTTAAATTATTAGACACATATGGATTAATTATACATTTGCTTTATTTTTATATATGGTTAACAATGTCAAAAATAAAACTTCAAAAATTGTATATATATATTCCTACATATATACGTATATAGAATGGGAAAAAATGGAAAAAAGATTATATGGAATAAAGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCATGAGGTCAAGAGTTCAAGACCAGCCTGGCCAATATGTTGAAACCTGGTCTCTACTAAAAATACAAAAATTAGCCGGGCTTGGCAAGCATGGTGGCATGCACCTGTAGTCCCAGATACTCGGAAGGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGGGAGATTGTCTCAAAAAAAAAAAAATAAAAACCTATCTAAGGCGCTGGTAAAAGACTATGTCTTGAAAGACATTTTTAGCAAAGTATCTCAATATATAACTAGATCATCAATAAAAACCTAAGTTACAAAGCTCTCCAAACATTATCATGATCAATACACTAATGCTGTTCTT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4510:HG2_PB_PB10Xdip_24864:HG2_PB_PB10Xdip_24863:HG4_PB_assemblyticsfalcon_23413:HG4_PB_SVrefine2Falcon1Dovetail_4565:HG2_PB_SVrefine2PBcRplusDovetail_9885:HG2_PB_SVrefine2PB10Xhap12_5461:HG3_PB_assemblyticsfalcon_23858:HG2_PB_SVrefine2Falcon2Bionano_3672:HG4_PB_SVrefine2PBcRDovetail_3710;NumClusterSVs=10;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_4565;NumExactMatchSVs=1;ClusterMaxShiftDist=0.190941;ClusterMaxSizeDiff=0.190941;ClusterMaxEditDist=0.197631;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=7522;DistBack=8523;DistForward=630;DistMin=630;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=673;REFWIDENED=6:165195473-165196145;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9996;PctRecOverlap=0.916;SizeDiff=-3;StartDistance=-631;EndDistance=-631;GTMatch=0;TruScore=96;MatchId=4858.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:88:1/1:3:28:1:42:./.:0:0:0:0:0/1:5:7:1/1:1:366:.:7593:.
chr6	168646313	HG2_PB_SVrefine2Falcon1plusDovetail_10679	A	ACTAACCTGCACCCGAAATTTCTGGATAGAGTAGATGTCTTTGGAATGTTCTAACCTGCACCCAAAATTTCTGGATAGAGCAGCCTTCTTCGGGATGTTCTAATCTGCACCCGAAATTTCTGGATAGAGCAGCCTTCTTCGGGATGTTCTAATCTGCACCCGAAATTTCTGGATAGAGCAGCCTTCTTCGGGATGTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10679:HG3_PB_pbsv_7348:HG2_PB_pbsv_7589:HG2_PB_SVrefine2Falcon2Bionano_3713;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10679:HG2_PB_SVrefine2Falcon2Bionano_3713;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0547264;ClusterMaxSizeDiff=0.039801;ClusterMaxEditDist=0.192593;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=196;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=638;REFWIDENED=6:168646314-168646951;PctSeqSimilarity=0.9893;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-363;EndDistance=-363;GTMatch=0;TruScore=66;MatchId=4879.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:35:0|1:15:4:1:11:./.:0:0:0:0:./.:10:1:./.:.:.:.:.:.
chr6	169054240	HG2_PB_SVrefine2PBcRplusDovetail_9937	A	AACCAACCCTGCACCTGAGCTCCAACCAAATGTTAGGAACTCACCAACCCTGCTCCTGAGCTCCAACCAAATGTTAGGAACTCACCAACCCTCTACCTGAGCTCCAACCAAATGTTAGGAACTCACCACCCCTGTACCTGAGCTCCAACCAAATGTTAGGAACTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10694:HG4_PB_SVrefine2Falcon1Dovetail_4628:HG2_PB_SVrefine2PBcRplusDovetail_9937:HG2_PB_SVrefine2PB10Xhap12_5530:HG2_PB_SVrefine2Falcon2Bionano_3723;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10694:HG2_PB_SVrefine2PBcRplusDovetail_9937:HG2_PB_SVrefine2PB10Xhap12_5530:HG2_PB_SVrefine2Falcon2Bionano_3723;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00607903;ClusterMaxSizeDiff=0.00607903;ClusterMaxEditDist=0.0303951;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=164;DistBack=28828;DistForward=52;DistMin=52;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1717;REFWIDENED=6:169054241-169055957;PctSeqSimilarity=0.9753;PctSizeSimilarity=0.9939;PctRecOverlap=0;SizeDiff=1;StartDistance=-948;EndDistance=-948;GTMatch=1;TruScore=65;MatchId=4884.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:6:33:1/1:3:14:2:12:./.:0:0:0:0:./.:5:3:./.:.:.:.:6690:.
chr6	169246894	HG2_PB_SVrefine2Falcon2Bionano_3730	G	GGTCTGCTGATGGTGCCGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGTCCGGCTGTTTCTCTTGTCTACTGATGTGCCGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTATTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCTGGCTGTTTCTCTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3730:HG2_PB_SVrefine2Falcon1plusDovetail_10701:HG2_PB_SVrefine2PBcRplusDovetail_9943:HG2_PB_SVrefine2PB10Xhap12_5538:HG4_PB_SVrefine2Falcon1Dovetail_4633;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3730;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0575646;ClusterMaxSizeDiff=0.0575646;ClusterMaxEditDist=0.0738007;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=696;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1144;REFWIDENED=6:169246895-169248038;PctSeqSimilarity=0.9695;PctSizeSimilarity=0.944;PctRecOverlap=0;SizeDiff=39;StartDistance=-946;EndDistance=-946;GTMatch=1;TruScore=63;MatchId=4887.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:64:1/1:2:23:1:13:./.:0:0:0:0:./.:1:12:./.:3:27:.:2931:.
chr7	506928	HG2_PB_SVrefine2PB10Xhap12_5611	A	AACCATCACTACCTCCCACAACCATCACCTCCTCCCACAACCATCACCTCTCACGGCCATCACCTCGTCCCACAACCGTCACCACCCATGACCATCACCTCCTCCCACAGCCATCACCTCCTCATGGCCATCACCTCCTCCCACAAGCATTACCACCTCCCACAACCATCACCACCTCCCACAACTATCACCTCCATCCACAACCATCACCTCCCATGACCATCACCTCCTCCCACAACCATCACCTCCTCCCACAACCATCACCTCCCATGACCATCACCTCCTCCCACAACCATCACCTCCTCCAACAACCATCACCTCCCATGACCATCACCTCCTCCCACAACCATCACCTCCCATG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10785:HG3_PB_HySA_11778:HG2_PB_HySA_14153:HG2_PB_HySA_14152:HG2_PB_PB10Xdip_27308:HG2_PB_PB10Xdip_27307:HG4_PB_HySA_11409:HG3_PB_pbsv_7496:HG4_PB_SVrefine2Falcon1Dovetail_4730:HG4_PB_pbsv_7771:HG4_PB_SVrefine2PBcRDovetail_3821:HG3_PB_SVrefine2PBcRDovetail_3527:HG3_PB_SVrefine2Falcon1Dovetail_4648:HG2_PB_SVrefine2PBcRplusDovetail_10017:HG2_PB_SVrefine2PB10Xhap12_5611:HG2_PB_SVrefine2Falcon2Bionano_3794:HG2_PB_SVrefine2Falcon1plusDovetail_10786:HG2_PB_pbsv_7736;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3794:HG2_PB_SVrefine2PB10Xhap12_5611:HG2_PB_SVrefine2PBcRplusDovetail_10017:HG3_PB_SVrefine2Falcon1Dovetail_4648:HG3_PB_SVrefine2PBcRDovetail_3527:HG4_PB_SVrefine2PBcRDovetail_3821;NumExactMatchSVs=6;ClusterMaxShiftDist=0.125683;ClusterMaxSizeDiff=0.125683;ClusterMaxEditDist=0.233244;PBcalls=18;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=360;DistBack=46;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=85;REFWIDENED=7:506929-507013;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4908.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:42:1/1:0:9:2:12:./.:0:0:0:0:1/1:0:12:1/1:1:31:.:3160:.
chr7	906146	HG2_PB_SVrefine2Falcon2Bionano_3812	G	GCCCCCCGTCTCCCCGGGCCTTCTCCCCCACTGTCTCCCCACCATCTCCCCGGGCCTTCGCCCCCACTGTCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3542:HG2_PB_PB10Xdip_29037:HG2_PB_PB10Xdip_29036:HG3_PB_pbsv_7535:HG4_PB_pbsv_7803:HG2_PB_SVrefine2PBcRplusDovetail_10033:HG2_PB_SVrefine2PB10Xhap12_5632:HG2_PB_SVrefine2Falcon2Bionano_3812;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3812:HG2_PB_SVrefine2PB10Xhap12_5632:HG2_PB_SVrefine2PBcRplusDovetail_10033;NumExactMatchSVs=3;ClusterMaxShiftDist=0.056338;ClusterMaxSizeDiff=0.056338;ClusterMaxEditDist=0.295775;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=71;DistBack=1759;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=252;REFWIDENED=7:906147-906398;PctSeqSimilarity=0.9805;PctSizeSimilarity=0.9861;PctRecOverlap=0;SizeDiff=-1;StartDistance=-158;EndDistance=-158;GTMatch=0;TruScore=65;MatchId=4917.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:9:38:1/1:2:12:5:16:./.:0:0:0:0:./.:5:1:./.:.:.:.:.:.
chr7	1072064	HG2_PB_SVrefine2PBcRplusDovetail_10045	C	CTGGCCCTAAGAGGCCACAGCCACCCACCCACACCGCCAGGCACCCCCAGGTGACAAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3823:HG4_Ill_GATKHC_12883:HG4_PB_assemblyticsfalcon_23715:HG2_Ill_GATKHC_12808:HG2_PB_pbsv_7781:HG4_Ill_250bpfermikitraw_10737:HG2_Ill_250bpfermikitraw_10730:HG4_PB_HySA_11458:HG4_PB_SVrefine2PBcRDovetail_3839:HG4_Ill_SVrefine2DISCOVARDovetail_5667:HG2_PB_SVrefine2PBcRplusDovetail_10045;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_10045:HG4_Ill_SVrefine2DISCOVARDovetail_5667:HG4_PB_SVrefine2PBcRDovetail_3839;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.285714;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=57;DistBack=733;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=283;REFWIDENED=7:1072065-1072347;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9825;PctRecOverlap=0;SizeDiff=1;StartDistance=-145;EndDistance=-145;GTMatch=0;TruScore=65;MatchId=4920.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:0|1:27:6:1:23:./.:0:0:0:0:0/0:21:1:./.:.:.:3492:.:.
chr7	2075966	HG3_PB_assemblyticsfalcon_24175	G	GGGTCCAGGCTCCCAGGCATGAGCGCGGGAGCACTGACAAGTCGGGACAGAGCTGGGGTCCAGGCTCCCAGGCATGAGCGCGGAGCACTGACAAGTCGGGACAGAGCTGGGGTCCAGGCTCCCAGGCATGAGCGCGGGAGCACTGACAAGTCGGGACAGAGCT	10	PASS	ClusterIDs=HG3_PB_pbsv_7608:HG3_PB_SVrefine2Falcon1Dovetail_4718:HG3_PB_pbsv_7609:HG3_PB_assemblyticsfalcon_24175:HG2_PB_SVrefine2Falcon2Bionano_3851;NumClusterSVs=5;ExactMatchIDs=HG3_PB_assemblyticsfalcon_24175;NumExactMatchSVs=1;ClusterMaxShiftDist=0.138554;ClusterMaxSizeDiff=0.13253;ClusterMaxEditDist=0.361446;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=162;DistBack=233;DistForward=8906;DistMin=233;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1148;REFWIDENED=7:2074868-2076015;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9878;PctRecOverlap=0;SizeDiff=-2;StartDistance=178;EndDistance=178;GTMatch=0;TruScore=66;MatchId=4927.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:0|1:13:1:3:11:./.:0:0:0:0:0/0:16:0:./.:.:.:.:.:.
chr7	5209295	HG4_PB_pbsv_7909	T	TCAGGCGAATCACTTTGAACCCAGGAGTAGAATGGCTCAGGTGAGCCGAGATTGCACCACTGCACTCCAGCCTAGCACCCAGAAGCTGAGACTGTGTCTCAAAAACAAAACAAAACCAAAAACAAAAACAACAACTCACATAAAATTTAGCTGGGGTGTGGTGGGATGCCACTGTAAACGCCAGCTATCATGGATGGCTGAGGCAGAGAATCGCTTGAAAACCCAGGAAGCGGAGGTTTGCCATGTGAGCCGAGATCGCACCAATTGCACTTCTCAGCCTGGGTGACAGCAGCAAAACCTCTGTCTCAAAAAAAAAAAAAAAAGTAGCTTTACACCAATAGCCAAGGGAGTTAGAGTCACTACAGAAATACTTGGTTCCCTATAAGAAATTAAAGATAACATCTTGGGCCTGGTATGTGGCACACCCTATATTTCCCTTCCATTTAGGAGGCAGGCGGGCGGACTGCTTGAGCTCAGAGTTTTGAAGGACCAGCCTGGGCAAGCATAGCAGACCCCTGCCTGCTACTAAATAATAAAACATTTGCCGGGCGTGGTGACTACATGCATGTGGTCTCAGCTACTAGTCAGGAGGCTGAAAGTGCGCGAGAATCACCCGAGTCCAGGAGGCTGGAAAGGCTGCAGTGGGAAATGATTGTGCACTGCACTCCACAGCTGGGAGAAGGGAGTGAGACCCTGTCTCAAAAAAAAAAAAAAATCAGTGAGAGAAGCAAAGGACTGACCTTCACAGGGCCAGAATGCTAGGCACAGTGAGGCCAACCACCCACAGTCCAAGGTTTGTGCAGCCGGAGAAAAAAAATTAGGTGCATTTATTTGCAGGGCGCCTTAAGCTAATTGGAGAGCTGGCAGCTTTACATCCAGAACTCCGCTGCTTGCAGGGTAGGCGTCTTTAAAGGTAAGGAGGCGGAGGTTTACGCAAAGTCCATAAATCAGTATGCTGAAGGCTATACGTTGGCTTTGGCCCTAAAAGGTGGGATATCTTAAAGTGGGGCTTACAGGTCAATAGGTGGATTCAAAAGATTTTTTTTTTTATCTTCTAATGGTTTAAGAAGAGAAAACTTTGTTTAAAAAATGCGGAGTTGCGCCAGGCGCAATGGCCATCGCCTGTAATCCCCAAGCACTTTGGGAGGCCGAGGGGTGGGCGGATCACCTGAGGTCAGGAGTTTCCAGGAACCAGCCTGGAAACAATGAATAAACTACCCCATCTCTACTAAAAGTAACAAGAATCTAGGTAGGATGCAGTGGCGGGCACCTGTAATCAGCTACTTGGGCAGGCTGAGGCACGATAAGAAAGGTTAGAACCTGGGAGGCAGAGTTGCAGTGGGTCAAGGTTTGATGCACTGCACAGCGTGCCCTCGCAGCCTGGGCAACAGAGCAAACTCCTGTCCTCAGAAAAAAATATATAAATAATAATAAAAATAAAATAAAAGTACAAAAAATTTGGCCAGGTGCGGTGCTTACGCCTGTAATCCCAACACTTTGGGAGCAAGGCGAGATGAATCAACCCAAGGTCAGGGGTTGGAGCCAACCTGGCCAACATGGCAAAAACCCACCTCTACTAAAAAATACAATAATTAGCTGGGCGTGGTGGTGGGTGCTTGTAAGCTCCAGCTACTAAAAGGCTGAGGCAGGAGAATTGCTTGACCCGAAGGCAGAGTTGAGTGAGCCGAGATCAAGCCACTGAACCTCCAACAATGGGCAACAGAGCGATGACTCCATTTCAATAAATAACATAGGCGAGGGTGGGGTGCGTCACAACCTGTAATACCCAGCACTTTGGGAAGGCGAGGTGGGTGGATCACGAGGTAGTGTAGTCGAGACTCAGCCGGCCAGGATGGCGAAACCCCGTCTCTACTAAAATACAAAAATTAGCCAGGCATGGTGGCATGCACCTTAATCCAGCTACTTGGGCGGCAGAGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3879:HG4_PB_pbsv_7909:HG2_PB_HySA_14368:HG2_PB_SVrefine2Falcon1plusDovetail_10875:HG2_PB_SVrefine2Falcon2Bionano_3872:HG2_10X_SVrefine210Xhap12_5607;NumClusterSVs=6;ExactMatchIDs=HG4_PB_pbsv_7909;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0480211;ClusterMaxSizeDiff=0.0453826;ClusterMaxEditDist=0.153725;PBcalls=5;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=1937;DistBack=4883;DistForward=5346;DistMin=4883;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1999;REFWIDENED=7:5207297-5209295;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4929.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:34:./.:10:15:23:2:./.:0:0:0:0:0/0:58:0:0/1:91:28:.:1782:.
chr7	10629658	HG4_PB_SVrefine2PBcRDovetail_3894	A	AAAAAAAAATCCTTCAATTTGAGATCTCCCTTTCTACTTAGGTTAGGGAAAGTAAAAAAAAATCCTTCAATTTGAGATCTCCCTTTCTACTTAGGTTAGGGAAAGTAAAAAAAAATCCTTCAATTTGAGATCTCCCTTTCTACTTAGGTTAGGGAAAGT	10	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_23873:HG2_PB_assemblyticsfalcon_24432:HG2_PB_SVrefine2Falcon1plusDovetail_10894:HG4_PB_SVrefine2PBcRDovetail_3894:HG4_PB_SVrefine2Falcon1Dovetail_4836;NumClusterSVs=5;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_3894;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0507937;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=158;DistBack=319;DistForward=103;DistMin=103;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=914;REFWIDENED=7:10628909-10629822;PctSeqSimilarity=0.9832;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=318;EndDistance=318;GTMatch=0;TruScore=66;MatchId=4939.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:27:0|1:43:4:3:26:./.:0:0:0:0:./.:6:1:./.:.:.:.:.:.
chr7	11219432	HG2_PB_SVrefine2PB10Xhap12_5738	T	TATATAATATTTATTATTATATGTGTTATATATGTATATTATATATGTCATATTATGTATTATATAATATATTATATAAACATAAATATATAAGCATATACACATATATTACATAATATATAGTATGTATAATACATTATATATGACATATATATAATGTATTATACATAATATATAATATATAATGTATTATACATAATATATAATATATAATGTATTATAATATATATATATAATG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3887:HG2_PB_SVrefine2PB10Xhap12_5738:HG4_PB_SVrefine2PBcRDovetail_3896:HG2_PB_SVrefine2Falcon1plusDovetail_10896;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5738;NumExactMatchSVs=1;ClusterMaxShiftDist=0.365672;ClusterMaxSizeDiff=0.365672;ClusterMaxEditDist=0.376866;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=237;DistBack=-895;DistForward=111;DistMin=-895;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=908;REFWIDENED=7:11219433-11220340;PctSeqSimilarity=0.9265;PctSizeSimilarity=0.9518;PctRecOverlap=0;SizeDiff=-12;StartDistance=-470;EndDistance=-470;GTMatch=0;TruScore=62;MatchId=4940.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:39:./.:4:31:22:10:./.:0:0:0:0:0/1:27:12:./.:.:.:.:.:.
chr7	26187837	HG3_Ill_SVrefine2DISCOVARDovetail_6028	A	ACCCGGCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCCTCCGGGAGGGAGCTGGGGGGTCAGCCCCCG	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_5813:HG3_PB_pbsv_7777:HG3_PB_assemblyticsfalcon_24427:HG3_PB_SVrefine2Falcon1Dovetail_4826:HG2_Ill_SVrefine2DISCOVARplusDovetail_11929:HG4_PB_pbsv_8018:HG4_PB_SVrefine2PBcRDovetail_3953:HG2_PB_pbsv_7993:HG4_PB_SVrefine2Falcon1Dovetail_4898:HG3_PB_SVrefine2PBcRDovetail_3671:HG3_Ill_SVrefine2DISCOVARDovetail_6028:HG2_PB_SVrefine2PBcRplusDovetail_10153:HG2_PB_SVrefine2PB10Xhap12_5802:HG2_PB_SVrefine2Falcon2Bionano_3937;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3937:HG2_PB_SVrefine2PB10Xhap12_5802:HG2_PB_SVrefine2PBcRplusDovetail_10153:HG3_Ill_SVrefine2DISCOVARDovetail_6028:HG3_PB_SVrefine2PBcRDovetail_3671:HG4_PB_SVrefine2Falcon1Dovetail_4898;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0320856;ClusterMaxEditDist=0.296296;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=93;DistBack=39978;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=283;REFWIDENED=7:26187838-26188120;PctSeqSimilarity=0.9854;PctSizeSimilarity=0.9894;PctRecOverlap=0;SizeDiff=-1;StartDistance=-111;EndDistance=-111;GTMatch=0;TruScore=65;MatchId=4961.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:48:1/1:2:24:1:22:./.:0:0:0:0:0/1:13:8:./.:.:.:.:.:.
chr7	69960528	HG2_PB_SVrefine2Falcon2Bionano_3987	G	GACACACACCCCCGCACATGCACACGTCACATCAGCATCAATCACACACCCACTCACACACACCACGTACACAGTCGCACACACACACCCCACACATGCACACGTCACATCAGCATCGATCACACACCCCACTCACACACACCACATACACAGTCACACACACACACACCCCACACATGCACACGTCACGTCAGCATCGATCACACACCCCACTCACACACACCACGTACACAGTCACACACACACACACCCCACACATGCACACGTCACATCAGCATCGATCACACACCCCACTCACACCACGTACACAAACACACACACGCCCCACACATGCACATGTCACATCAGCGTCGATCACACATCCCACTCACACACACCACGTACACAGTCACACACACACACCCCACACATGCACACGTCACATCAGCATCGATCACACACACCACTCATACCACATACACAGTCACACACACACACCCCCCCACACACACATGCACACGTCACATCAGCATCTATCACACACCCCACTCACAGACACCACATACACAGTCAGACACACACCCCACACATGCACACGTCACATCAGCATCGATCACACACCCCACTCACACACACCACGTACACAGTCACAC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5015:HG2_PB_SVrefine2Falcon2Bionano_3987:HG3_PB_HySA_12570:HG2_PB_SVrefine2PB10Xhap12_6007:HG2_PB_SVrefine2Falcon1plusDovetail_11104;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3987;NumExactMatchSVs=1;ClusterMaxShiftDist=0.140559;ClusterMaxSizeDiff=0.140559;ClusterMaxEditDist=0.250639;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=631;DistBack=-1815;DistForward=249;DistMin=-1815;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1815;REFWIDENED=7:69960529-69962343;PctSeqSimilarity=0.9714;PctSizeSimilarity=0.9715;PctRecOverlap=0;SizeDiff=18;StartDistance=-809;EndDistance=-809;GTMatch=0;TruScore=64;MatchId=5028.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:34:0|1:23:4:4:22:./.:0:0:0:0:0/0:14:0:0/1:14:12:.:.:.
chr7	70337082	HG2_PB_SVrefine2PBcRplusDovetail_10310	A	AGAAGGAAGGAAGGAAAGAAAGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAATGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGAAAGAAAGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAATGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGAATGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGGAGGGAGGGAGGAAGGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGAAAGAGGAGGGAGGGAGGAAGGGAGGGAGAAGGGAGGGAGGAAGGGAGGGAGGAGGGAGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAGGGAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGAAGGAGGGAGGAAGGGAGGGAGGAAGGAGGGAGGAAGGGAGGGAGGAGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGAGGGAGGGAGGAATGGAGGGAGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAATGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGAGGGAGGGGGAGGAGGAAGGGAGGGAGGAGGGAGGGAGGGAGGAGGAAGGAGGGAGGGAGGGAGGAAGAGGGAGGGAGGGAGGGAGGAAGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGGAGGGAGGAGGAAGGAGGAGGAAGGGAGGAGGGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAGGGAGGAGGGAGGGAGGAAGGGAGGGAGGTAGGGAGGGAGGAGGGAGGAAGGGAGGGAGAAGGAAGGGAGGGAGGAAGGAAAGAAAGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGAGGGAGGGAGGAATGGAGGGAGGAAGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGAGGGAGGGAGGGAGGAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAATGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGGAGGGAGGAGGGAGGGAGGGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6010:HG2_PB_pbsv_8242:HG2_PB_SVrefine2PBcRplusDovetail_10310:HG2_PB_SVrefine2Falcon1plusDovetail_11106;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_10310;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0900401;ClusterMaxSizeDiff=0.0826141;ClusterMaxEditDist=0.147394;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1688;DistBack=177;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=242;REFWIDENED=7:70337083-70337324;PctSeqSimilarity=0.1966;PctSizeSimilarity=0.0267;PctRecOverlap=0.0266;SizeDiff=1643;StartDistance=-155;EndDistance=-155;GTMatch=0;TruScore=8;MatchId=5031.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:11:26:1|0:2:26:8:2:./.:0:0:0:0:./.:0:0:0/1:44:30:.:1789:.
chr7	79606259	HG4_PB_HySA_12267	C	CTAGAGCCAGAGTGCCTGTGGCAGCCTGCTTTTATTCTCTTATCTGGCCCCACCCACATCCTGCTGATTGT	20	PASS	ClusterIDs=HG2_PB_HySA_15235:HG4_PB_HySA_12267:HG4_Ill_GATKHC_13733:HG4_Ill_250bpfermikitraw_11431;NumClusterSVs=4;ExactMatchIDs=HG4_PB_HySA_12267;NumExactMatchSVs=1;ClusterMaxShiftDist=0.070922;ClusterMaxSizeDiff=0.070922;ClusterMaxEditDist=0.100719;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=70;DistBack=87849;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=139;REFWIDENED=7:79606139-79606277;PctSeqSimilarity=0.9896;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=121;EndDistance=121;GTMatch=0;TruScore=66;MatchId=5044.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:26:0|1:44:6:1:19:./.:0:0:0:0:0/1:28:10:./.:.:.:.:.:.
chr7	100550585	HG2_PB_SVrefine2Falcon1plusDovetail_11191	C	CCACCACCACTGAGATCTCCTCCCACAGTACTCCCAGCTTCTCTTCATCAACCATCTACTCCACAGTCAGCACATCCACAACTGCCATCTCCTCACTTCCCCCTACCTCAGGTACTATGGTGACTTCCACAACCATGACCCCATCTTCTCTGAGTACAGACATCCCTTTCACAACACCAACAACTATCACCCACCATTCTGTGGGCTCTACTGGTTTCCTGACTACAGCAACAGACCTCACATCAACATTCACGGTTTCCAGTTCCTCAGCAATGTCCACGAGTGTCATTCCATCTTCCCCCAGCATTCAGAATACAGAAACCTCATCCCTTGTCAGCATGACCTCTGCCACTACTCCCAATGTGAGACCAACTTTTGTAAGTACACTCAGCACTCCTACAAGTTCCCTCCTGACGACCTTCCCAAGTACATATTCATTTTCATCTTCCATGTCTGCCAGCAGTGCTGGGACCACTCACACAGAGAGTATCTCCTCACCTCCAGCCAGCACCAGTACACTCCATACAACAGCTGAATCCACCCTGGCACCCACTACCACCACCTCATTCACAACTTCCACAACTATGGAACCACCTTCAACCACTGCAGCAACTACAGGAACAGGTCAGACCACCTTCACCAGCTCTACAGCCACATTTCCTGAGACCACCACACCGACTCCTACAACTGACATGTCCACAGAATCTCTCACAACAGCCATGACTTCTCCTCCCATCACTTCATCAGTCACTTCCACAAATACAGTGACTTCTATGACAACTACGACCTCTCCTCCCACAACCACCAATTCTTTTACATCACTGACCAGTATGCCTCTGTCTTCTACACCTGTCCCAAGCACAGAAGTAGTCACCAGTGGCACCATAAACACAATCCCTCCATCTATCTTGGTGACCACACTCCCCACTCCAAATGCTTCATCTATGACTACATCTGAGACCACCTATCCTAATTCTCCGACTGACTGTCCTGGTACAAACTCCACGACGGAAATCACCTATCCCACCACTATGACAGAGACATCATCCACTGCCACCTCTCTTCCACCCACCTCTCCCTTGGTCTCAACTGCAAAAACAGCCAAAACTCCTACCACAAACTTGGTAACCACCACCACCAAGACCACCTCACATAGTACCACCAGCTTCACTTCTTCAACCGTCTACTCCACAGCCAGCACATACACAACTGCCATCACCTCAGTTCCCACTACGTTGGGTACCATGGTAACTTCTACATCCATGATCTCATCTACTGTGAGTACAGGTATCCCTACCTCACAACCAACAACCATCACTCCCTCATCCGTGGGCATCAGTGGTTCATTACCTATGATGACAGACCTCACCTCAGTGTACACAGTCTCTAGCATGTCTGCAAGGCCAACAACTGTCATTCCCTCATCTCCCACTGTCCAGAATACAGAAATCTCAATCTCTGTTAGCATGACGTCTGCTACCACTCCCAGTGGAGGACCAACTTTCACAAGTACTGAGAACACTCCAACAAGGTCCCTCCTGACAAGCTTTCCAATGACACATTCATTCTCTTCTTCTATGTCTGAAAGTAGTGCTGGGACCACTCACACAGAGAGTATCTCCTCACCTCGAGGCACCACCAGTACACTCCACACAACAGTTGAATCCACCCATCACCCACTACCACCACCTCATTTACCACATCCACAATGATGGAACCACCTTCATCCACTGTATCAACTACAGGCAGAGGTCAGACCACCTTTCCCAGCTCTACAGCCACATTCCCTGAGACCACTACACTGACTCCTACAACTGACATTTCTACAGTATCTCTCACAACAGCCATGACTTCTCCTCCCCCCGTCAGTTCTTCAATCACTCCCACCAATACAATGACTTCTATGAGAACTACAACCTATTGGCCCACAGCCACTAATACATTATCACCACTCACCAGTAGCATTTTATCTTCTACACCTGTCCCAAGCACAGAAATGATCACCAGTCATACCACAAACACCACCCCTCTATCCACCTTGGTGACTACACTCCTCACTACCATCACCAGATCTACACCTACATCTGAGACCACCTACCCTACTTCTCCCACCAGCATTGTCTCAGACTCCACGACTGAAATCACCTATTCCACAAGTATAACAGGTACATTGTCCACTGCCACTACTCTCCCACCCACCTCTTCCTCTCTCCCAACCACAGAAACAGCCACGATGACTCCTACCACAACCTTGATAACCACCACCCCTAATACCACCTCCCTTAGTACCCCAGCTTCACTTCTTCAACCATCTACTCCACAGTCAGCACATCCACAACTGCCATCTCCTCAGCTTCCCTACCTCAGGTACCATGGTAACTTCCACAACCATGACCCCATCTTCTCTGAGTACAGACACCCCTTCCACAACACCAACAACTATCACCTACCCTTCTGTGGGCTCTACCGGTTTCCTGACTACAGCAACAGACCTCACATCAACATTCACTGTTTCCAGTTCCTCAGCAATGTCCACAAGTGTCATTCCATCTTCCCCAGCATCCAGAATACAGAAACCTCATCCCTTGTCAGCATGACCTCTGCCACCACTCCCAGTTTGAGACCAACTATCACAAGTACTGACAGCACTCTAACAAGTTCCTCCTGACGACCTTCCCAAGTACATATTCATTTCATCTTCCATGTCTGCCAGCAGTGCAGGGACCACTCACACAGAGACTATTTCCTCACTTCCAGCCAGCACCAATACAATCCACACAACAGCTGAATCCGCCCTGGCACCCACTACCACCACCTCATTCACCACATCCCCAACGATGGAACCACCTTCAACCACTGTAGCGACTACAGGCACAGGTCAGACCACCTTCCCCAGCTCTACAGCCACATTCCTTGAGACCACCACACTGACTCCTACAACTGACTTTTCTACAGAATCTCTCACAACAGCCATGACTTCTACTCCCCCCATCACTTCTTCAATCACTCCCACCGATACAATGACTTCTATGAGAACTACGACCTCTTGGCCCACAGCCACTAATACGTTATCACCACTCACCAGTAGCATTTTATCTTCTACACCTGTCCCAAGCACAGAGGTGACCACCAGTCATACCACAAACACCAATCCTGTATCCACGTTGGTGACTACACTCCCATTACCATCACCAGGTCTACACTTACATCTGAGACCGCCTACCCTAGTTCTCCCACAAGCACTGTCACAGAGTCCACAACTGAAATCACCTATCCCACCACTATGACAGAGACATCATCTACTGCCACCTCTCTTCCACCCACCTCTTCCTTGGTCTCAACCGCAGAAACAGCCAAAACTCCTACCACAAACTTGGTAACCACCACCACCAAGACCACCTCACATAGTACCACCAGCTTCACTTCTTCAACCATCTACTCCACAGCCAGCACACCCACCACTGCCATCACCTCAGTTCCCACTACCTTGGGTACCATGGTGACTTCTACATCCATGATCCCATCTACTGTGAGTACAGGTATCCCTACCTCACAACCAACAACTATTACTCCCTCATCCGTGGGCATCAGTGGTTCATTACCTATGATGACAGACCTCACCTCAGTGTACACAGTCTCCAGCATGTCTGCAAGGCCAACAAGTGTCATTCCTTCATCTCCCACTGTCCAGAATACAGAAACCTCAATCTTTGTTAGCATGATGTCTGCTACCACTCCCAGTGGAGGACCAACTTTCACAAGTACTGAGAACACTCCAACAAGGTCCCTCCTGACAAGCTTTCCAGTGACACATTCATTTTCCTCTTCCATGTCTGCCAGCAGTGTAGGGACCACTCACACCCAGAGTATCTCCTCACCCCAGCCATCACCAGTACACTCCACACAACAGCTGAATCCACCCCATCACCTACAACCACCATGTCATTCACAACATTTACAAAGATGGAAACACCTTCATCCACTGTAGCAACTACAGGCACAGGTCAGACTACATTCACCAGTTCAACAGCCACATCCCCTAAGACCACCACACTGACTCCTACCTCTGACATTTCCACAGGATCTTTCAAAACAGCCGTGAGTTCTACTCCCCCATCACTTCTTCAATCACCTCCACATATACGGTGACTTCGATGACAACTACCACCCCTCTAGGGCCCACAGCCACTAATACGTTACCATCATTTACAGTAGCGTTTCATCTTCTACGCCTGTCCCAAGTACAGAAGCGATCACCAGTGGTACCACAAACACCACCCTCTATCTACATTGGTGACCACATTCTCCAATTCCGACACCAGTTCTACACCTACATCTGAGACCACCTACCCTACTTCTCTTACTAGTGCTCTCACAGATTCCACGACCAGAACCACCTATTCCACCAATATGACAGGTACATTGTCCACTGTGACTCTCTTCGACCCACCTCTTCCTCTCTCCTCACCACAGTAACAGCCACAGTTCCAACAACAAACTTGGTAACCACGACCACCAAGATCACCTCACACAGTACTCCTAGCTTCACTTCTTCAATCGCAACCACCGAGACCCCCTCACACAGTACTCCCAGATTCACTTCTTCAATCACCACTACCGAGACCCCCTCACACAGTACTCCCAGATTCACTTCTTCAATCACCAATACCAAGACCACCTCACACAGCTCTCCCAGCTTCACTTCTTCGATCACACCACCGAGACCACATCCCACAATACTCCCAGCCTCACTTCTTCAATCACCACCACCAAGACCACCTCACACAGTACTCCCAGCTACACTTCTTTGATCACCACACCACCACCACCTCACACAGTACTCCCAGCTTCACTTCTTCCATCACCACCACTGAGACCACATCCACAATACTCCCAGCTTGACTTCTTCGATCACAACCACCGAGACCACATCCCATAGTACTCCCAGCTTCACTTCTTCGATCACCACCGAGACCACTCCCACAGTACTCCCAGCTTCACTTCATTGATCACAATCCACCGAGATCACGCTCACACAGTACTCTCAGCTACACTACCTCAATCACACCCGAGACCCCTCACACAGTACTCTCAGCTTCACTTCTTCAATCACCACACTGAACACCTCACACAGTACTCCAGCTTCACTTCCTCAATCACCACCTCTGAGATGCCTCACACAGTACTCCCAGCTTCACTTCTTCGATCACCACCACTGAGAACGCCACACACAGTACTCCCAACTTCACTTCTTCAATCACCCACCACGACAACATCACAGTACTCCCAGCTTCACTTCTTTGATCACCACCACGGAGACCACCTCACACAGTACTCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCCTCACACAGTACTCCCAGCTTCACTTCTCAATCACCAACCACCGAGACCCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCGATCACCACACCGACTCGATCGTCACCACCGAGACCACATCCCACAGTACTCCCAGCTTCACTTGTTCAATCAGCACCACGAGACCACATCCACAGTACTCCCAGCTTTACTTCTTCGATCACCATCACTGAGACCACCTCACACAGTACTCCCAGCTACACTACCTCAATCACCAGCACCGAGACCCCCTCACACAGTATCCCAGCTACACTGCCTCAATCACCACCATGAGATCCCATCCCACAGTACTCCCAGCTTCATTCTTCAATCAGGACCACTGAGACCACCTCTCATAGTACTCCCAGCTTCACTTCTTCATCATCGCCACCGAAACCACCTCACACAGTACTCCCAGCTACACTTCTTTGATCCCCACAACCGAGACCACTTCACACAGTACTCCCAGCTTCACTTCTTCAATCACCACCACTGAGACCACTCACACAATACTCCCAGCTTCACTTCTTCGATCACCACCACCGAGACACATCCCACAGTACTCCCAGCTTCACTTCTTTGATCACCACTATGGAGACCACCTCACACAGTACTCCCAGCTTCATTTCTTTGATAACCACCTCTGAGACCCCCTCACACAGTACTCCCAGCTTACTTCTTTGATCACCACCACCGAGACCCCTCAAGCAGTACTCCCAGCTTCACTTCTTTGATCACACCACCGACTCGATCGTCACCACCGAGACCACATCCACAGTACTCCCAGCTTCACTTCTTCAATCAGCACACCACTGAGACCACATCCCACATATCCCAGCTTCACTTCTTCGATCACCATCACTGAGACCACCTCACACAGTACTCCCAGCTACACTACCTCAATCACCAGCACCAAGACCCCCTCACACAGTACTCCCAGCTACACTACCTCAATCACCACCACTGTTATCCCATCACACAGTACTCCCAGCTTCACTTCTTCAATCACCACCACCGAGACCACATCCAACAGTACTCCCAGCTTCACTTCTTCAATCAGGACCACTGAGACCACCTCTCATAGTACTCCCAGCTTCACTACTTCAATCATCGCCACTGAAACCACCTCACACAGTACTCCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCCTCACACAGTACTCCCAGCTTCACTTCTTTGATCACCACCACCGAGACCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCGATCACCATCACCGAGACCACCTCACAGAGTACTCCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCGTCACACAGTACTCCAGCTTCACTTCTTCGATTACCACCACGAGACCCCCTTAAGCAGTACTCCAGCTTCACTTCTTCGATCACCACCACCGAGACCACATCCACGTACTCCAGCTTCACTTCTTTGATCACATCACCGAGACCACTCACAGAGTACTCCAGCTTCACTTCTTTGATAACCACGCTCTGAGACCCCGTCACACAGTACTCCAGCTTCACTTCTTCGATTACACCACCGAGACCCCTTAAGCAGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTTCCCAGCTTCACTTCTTTGATCACCATCACCGAGACCACCTCACACAGTACTCCCAGCTTCATTCTTTGATAACTCACCTCTGAGACCCCGTCACACAGTACTCCAAGCTTCACTTCTTCGATTACCACCACCGAGACCACCCTCAAGCAGTACTCCAGCTTCACTTCTTCGATCACACCACGAGACCAATCCCACAGTACTTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTTGATCACCATCACCGAGACCACTCACACAGTACTCCCAGCTACACTACCTCAATCACCACCACCGAGACCCCTCACACAGTACTCCCAGCTACACTACCTCAATCACCACCACCGAGACCCATCACACAGTACTCCCAGCTTCACTTCTTCAATCAGACCACCGAGACCACATCCACAGTACTCCCAGCTTCACTTCTTCAATCAGGACCACCGAGACCCATCCTACAGTACTCCCAGTTCACTTCTTCAAATACCATCACTGAGACCACTCACACAGTACTCCCAGCTACATTACCTCAATCACCACCACCGAGACCCCCTCAAGCAGTACTCCCAGCTTCAGTTCTTCGATCACACCACTGAGACATCCCACAGTACTCCCAGCTTCACTTCTTTGATCACCACCACGGAGAACCTCACACAGTACTCCAGCTTCATTTCTTTGATAACCACCTCTGAGACCCCCTCACACAGTACTCCCAGCTTCACTTCTTCGATCACCACCACGGAGACCCCTCACACAGTACTCCCAGCTTCATTTCTTTGATACCACCTCTGAGACCCCCTCACACAGTACTCCCAGCTTCACTTCTTCGATCACACCACCGGGCCCCCTCAGCAGTACTCCCAGCTTCACTTCTTTGATCACCCACCGACTCGATCGTCACCACCGAGACCACATACCACAGTATCCCAGCTTCACTTGTTCATCAGCACACTAAGACCACATCACAGTACTCCCAGCTTCACTTCTCGTCACCATCACTGAGACCACCTCACACAGTACTCCCAGCTACACTACCTCAATCACAGCACCAAGACCCCTCAACAGTATCCAGCTCACTACCTCACCACCACTGAGATCCATCACACAGTATCCAGCTTCACTTCTTCAATCACACCACCGAGACCACATCCACAGTACTCCCAGCTTCACTTCTTCAATCAGGACCACTGAGACCACCTCTCATAGTACTCCCAGCTTCACTTCTTCGATCATCGCCACCGAAACCACCTCACACAGTACTTCCCAGCTACACTTCTTTGATCCCCACAACCGAGACCACTTCACACAGTACTCCAGCTTCACTTCTTCAATCACCACCACTGAGACCACCTCACACAATACTCCCAGCTTCACTTCTTCGATCACACCACCGAGACCACATCCACAGTACTCCCAGCTTCACTTCTTTGATCACCACACACGGAGACCACCTCACACAGTACTCCCAGCTTCATTTCTTTGATAACCACGTCTGGAGACCCCTCACACAGTACTCCCAGCTTCACTTCTTCGATCACACAACCGAGGCCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCGATCACCACCACCGACTCGATCGTCACCACCGAGACCACATCCACAGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCGATCACCATCACTGAGACCACCTCACACAGTACTCCCAGCTACACTACTCAATCACCAGCACCAAGACCCCCTCACACAGTACTCCCAGCTACACTACCTCAATCACCACCACTGAGATCCCATCACACAGTACTCCCAGCTTCACTTCTTCAATCATCACCACCGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGGACCACTGAGACCACCTCTCATAGTACTCCCAGCTTCACTTCTTCGTTCATCGCCACTGAAACCACCTCACACAGTACACCCAGCTACACTTCTTTGATCCCACAACCGAGACCACTTCACACAGTACTCCAGCTTCACTTCTTCAATCACCACCACTGAGACCACCTCACACAATACTCCCAGCTTCACTTCTTCGATCACCACCACCGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTTGATCACCACCACGGAGACCACCTCACACAGTACTCCCAGCTTCATTTCTTTGATAACCACCTCTGAGACCCCCTCACACAGTACTCCCAGCTTCACTTCTTCGATCACCACCACCGAGGCCCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCGATCACCACCACCGACTCGATCGTCACCACCGAGACCACATACCACAGTACTCCCAGCTTCACTTCTTTGATCACCACCACGGAGACCACTCACACAGTACTCCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCTGTCACACAGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCGATCACCATCACTGAGACCACCTCACACAGTACTCCCAGCTACAACTACCTCAATCACCAGCACCAAGACCCCCTCACACAGTACTCCCAGCTACACTACCTCAATCACCACCACTGAGATCCCATCACACAGTACTCCCAGCTTCACTTCTTCAATCACCACCACCAAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGGACCACTGAGACCACCTCTCATAGTACTCCCAGCTTCACTTCTTCAATCATCGCCACCGAAACCACCTCACACAGTACTCCCAGCTACACTTCTTTGATCCCCACAACCGAGACCACTTCACACAGTACTCCCAGCTTTACTCTTCAATCACCACCACTGAGACCACCTCACACAATACTCCCAGCTTCACTTCTTCGATCACCACCACCGAGACCACATCCCAGTACTCCCAGCTTCACTTCTTTGTTCACCACCACGGAGACCACCTCACACAGTACTCCCAGCTTCATTTCTTTGATAACCACGTCTGAGACCCCCCTCACAGAGTACTCCAGCTTCACTTCTTCGATCACCACCACCGAGACCCCTCAAGCAGTACTGCCAGCTTCACTTCTTCGATCACCACCACCGACTCGATCGTCACCACCGAGACCACTCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACCTCACACAATACTCCCAGCTTCACTTCTTCGATCACCACCACTCAGACCACATCCACAGTACTCCCAGCTTCACTTCTTTGATCACCACACGGAGACCACCTCACACAGTACTCCCAGCTTCATTTCTTTGATAACACCTCTGAGACCCCTCACACAGTACTCCCAGCTTCACTTCTTCGATCACCACCCCGAGACCCTCAAGCAGTACTGCAGCTTCACTTCTTCGATCCCACCACCGACTCGTCGTCACCACCGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCGATCACCATCACTGAGACCACCTCACACAGTACTCCCAGCTACACTACTCAATCACGCACCAAGACCCCCTCACACAGTACTCCCAGCTACACTACCTCAATCACCACCACTGAGATCCCATCACACAGTACTCCCAGCTTCACTTCTTCAATCACCACCACCGAGACACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGGACCACTGAGACCACCTCTCATAGTACTCCCAGCTTCACTTCTTCAATCATCGCCACCGAAACCACCTCACCACAGTACTCCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCCCTCACACAGTACTCCCAGCTTCACTTCTTTGATCACCACCACCGAGACCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCGATCAACCACCACCGACTCGATCGTCACCACCGAGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTTGATCACCACCACGGAGACCACCTCACACAGTACTCCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCTGTCACACAGTACTCCCAGCTTCACTTCTTCGATGACCACCACCGAGACCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCGATCACCACCACCGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTTGATCACCATCACCGAGACCACCTCACAGAGTACTCCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCATCACACAGTACTCCCAGCTTCACTTCTTCGATGACCACCACCGAGACCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCGATCACCACCACGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTCCAGCTTCACTTTTTGATCACCATCACCGAGACCACCTCACACAGTACTCCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCGTCACACAGTACTCCCAGCTTCACTTCTTCGATTACCACCACCGAGACCCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCAATCACCACCACCGAGACCACATCCCACCGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCACAGTACTCCCAGCTTCACTTCTTTGATCACCATCACCGAGACCACCTCACACAGTACTCCCAGCTACACTACCTCAATCACCACACCGAGACCCCTCACACAGTACTCCCAGCTACACTACCTCAATCACCACCACCGAGACCCCATCACACAGTACTCCCAGCTTCACTTCTTCAATCACCACCACCGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGGACCACCGAGACCACATCCTACAGTACTCCCAGCTTCACTTCTTCAAATACCATCACTGAGACCACCTCACACAGTACTCCCAGCTACATTACTCAATCACCACCACCGAGACCCCCTCAAGCAGTACTCCCAGCTTCAGTTCTTCGATCACCACCACTGAGACCACATCCCACAGTACTCCCGGCTTCACTTCTTCAATCACCACCACTGAGACTACATCCCACAGTACTCCCAGCTTCACTTCTTCGATCACCACCACTGAGACCACCTCACATGATACTCCCAGCTTCACTTCTTCAATCACCACCAGTGAGACCCCCTCACACAGTACTCCCAGCTCCACTTCTTTAATCACCACCACCAAGACCACCTCACACAGTACTCCCAGCTTCACTTCTTCGATCACCACCACCGAGACCACCTCACACAGTGCTCACAGCTTCACTTCTTCGATCACCACACCGAGACCACCTCACACAATACTCCAGCTTCACTTCTTCGATCACCACCACCGAGACCAACTCTCACAGTACTACCAGCTTCACTTCTTCGATCACCACCACCGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTTGATCACCATCACCGAGACCACCTCACAGAGTACTCCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCCATCACACAGTACTCCCAGCTTCACTTCTTCGATACCACCACCGAGACCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCGATCACCACCACCGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTTGATCACCATCACCGAGACCACCTCACACAGTACTCCCAGCTTCACTTCTTTGATAACCACCTCTGAGACCCCGTCACACAGTACTCCCAGCTTCACTTCTTCGATTACCACCACCGAGACCCCCTCAAGCAGTACTCCCAGCTTCACTTCTTCGATCACCACCACCGAGACCACATCCCACCGTACTCCCAGCTTCACTTCTTCAATCAGCACCACTGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTTGATCACCATCACCGAGACCACCTCACACAGTACTCCAGCTACACTACCTCAATCACCACCACCGAGACCCCCTCACACAGTACTCCCAGCTACACTACCTCAATCACCACCACCGAGACCCCATCACACAGTACTCCCAGCTTCACTTCTTCAATCACCACCACCGAGACCACATCCCACAGTACTCCCAGCTTCACTTCTTCAATCAGGACCACCGAGACCACATCCTACAGTACTCCCAGCTTCACTTCTTCAAATACCATCACTGAGACCACCTCACACAGTACTCCCAGCTACATTACCTCAATCACCACCACCGAGACCCCCTCAAGCAGTACTCCCAGCTTCAGTTCTTCGAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5124:HG2_PB_PB10Xdip_26235:HG2_PB_SVrefine2Falcon1plusDovetail_11191:HG2_PB_SVrefine2PB10Xhap12_6138:HG2_PB_SVrefine2Falcon2Bionano_4093:HG3_PB_SVrefine2PBcRDovetail_3809;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11191;NumExactMatchSVs=1;ClusterMaxShiftDist=0.139196;ClusterMaxSizeDiff=0.139196;ClusterMaxEditDist=0.161588;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=13597;DistBack=3484;DistForward=97;DistMin=97;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=68;REFWIDENED=7:100550586-100550653;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=5088.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:2:14:1/1:2:26:0:6:./.:0:0:0:0:1/1:0:20:1/1:7:493:.:.:.
chr7	102071169	HG2_PB_pbsv_8439	A	AACAGGGAGGGAGAGGGAGAGACAGGGAGGGAAGGAAGGAACGAAGGAAGGAAGG	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_26263:HG4_PB_HySA_12452:HG4_PB_pbsv_8449:HG2_PB_pbsv_8439:HG2_PB_HySA_15452;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_8439;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0934579;ClusterMaxSizeDiff=0.0754717;ClusterMaxEditDist=0.266667;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=54;DistBack=30564;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=7:102071168-102071171;PctSeqSimilarity=0.9779;PctSizeSimilarity=0.963;PctRecOverlap=0;SizeDiff=2;StartDistance=82;EndDistance=82;GTMatch=0;TruScore=64;MatchId=5094.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:27:./.:7:19:12:0:./.:0:0:0:0:./.:18:1:./.:.:.:.:.:.
chr7	106621901	HG3_PB_SVrefine2PBcRDovetail_3836	G	GTTTGAGACAGAGTATCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCAATCTTGGCCCACTGCAATCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTGAGCCTCCCGAGTAGCTGGAAATATAGGCGCATGCCACCATGTCCGGCTAATTTTTTGTATTTTTAGCAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATTTCCTGACCTCCTGATCTGCCCGCCTCGGCCTCCCAAAGTGAGGTATTTTTTTTTTTTTTTTTTTT	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6047:HG3_PB_pbsv_8256:HG2_PB_pbsv_8472:HG2_PB_HySA_15513:HG2_PB_PB10Xdip_26307:HG4_PB_pbsv_8477:HG4_PB_HySA_12503:HG4_PB_SVrefine2PBcRDovetail_4197:HG3_PB_SVrefine2Falcon1Dovetail_5153:HG2_PB_SVrefine2Falcon1plusDovetail_11225:HG3_Ill_SVrefine2DISCOVARDovetail_6341:HG4_PB_SVrefine2Falcon1Dovetail_5153:HG3_PB_SVrefine2PBcRDovetail_3836:HG2_PB_SVrefine2PBcRplusDovetail_10438:HG2_PB_SVrefine2Falcon2Bionano_4130:HG2_PB_SVrefine2PB10Xhap12_6180:HG2_Ill_SVrefine2DISCOVARplusDovetail_12304;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4130:HG2_PB_SVrefine2PBcRplusDovetail_10438:HG3_PB_SVrefine2PBcRDovetail_3836:HG4_PB_SVrefine2Falcon1Dovetail_5153;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0707965;ClusterMaxSizeDiff=0.0672566;ClusterMaxEditDist=0.248705;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=275;DistBack=48042;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=529;REFWIDENED=7:106621902-106622430;PctSeqSimilarity=0.9683;PctSizeSimilarity=0.9964;PctRecOverlap=0;SizeDiff=-1;StartDistance=-276;EndDistance=-276;GTMatch=0;TruScore=65;MatchId=5104.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:1/1:0:32:0:11:./.:0:0:0:0:./.:3:1:./.:.:.:.:.:.
chr7	130449231	HG2_PB_SVrefine2PBcRplusDovetail_10496	A	ATATACTTTAAATTCTGGGTTACATGTGCAGAACATGCAGTTTTGTTACGTAGGTATACACATGCCCTGGTGGTTTGCTGCACCCATCAACCCGTCACCTACATTAGGTATTTCACCTAATGTTATCCCTTCCCTAGTCCCCCACCCCTGACAGGCCCCAGTGTGTGATGTTCCCCTCCCTGTGTCCATGTGTTCCCATTGTTCAACTCCCACTATGAGTGAGAACATGCGGTGTTTGGTTTTCTAATCTTGTGATAGTTTGCTGAGAATGATGGTTCCCAGCTTCATCCGTGTTCCTGCAAAGGACATGAACTCATCCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGATGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAGTAAACATGTGTGCCTGTGTCTTTATCGTAGAATGATTTATAATCCTTTGGGTATATGCCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCTTGAGGACTCGCCACACTGTTTTCCACAATGGTTGAACTAATTTACACTCCCACCGACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAAATGGTTTCTCACTGTGGTTTTGATTTGCATTTCTCTAATGGCCAGTGATGATGAGCATTTTTTCATATGTCTGTTGGCTGCATAAATGTCTTCTTTTCATAAGTATCTGTTCATATCCTTTGCCCATTTTTTGATGGGGTTGTTTTTTCCTGGTAAATTTGGTTAAGTTCTTTGTAGATTCTGGATATTAGCCCTTTGTCAGATGGATAGATTGCACAAATTTTCTCCCATTCTGTAGGTTGTCTGTTCACTCTGATGATAGGTTCCTTTGCTATGCGGAAGCTCTTTAGTTTAATTAGATCCTGTTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACGTTAAGTCTTTGCCCATGCCTATGTCCTGATGGTATTGCCCAGGTTTTCTTCTAAGATTGTTATGGTCCTGGGTCTTATGTCTAAGTCTTTGATCCATCTTGAGTTGATTTTTGTAAAAGGGGTAAGGGCATTTCCGTTTTCTGCATATGGCTAGCCAGTTTTCCCAACACCATTTGTTAAATAGGAAATCTTTTTCCCCATTGCTTGTGTGTGTCAGGTTTGTCAAAGATCAGATGGTTGTAGCTGTGTGGCATTGTTTCTGAGGCCTCCGTTCTGTTCTGTTGGTCTATATATCTGTTTTAGTACCAGTACCATGCTGTTTTGGTTACTATGGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTTGAGCTTTGTTCTTCTTGCCCAATATTGTCTTGGCTATGTGGGCTCCTGTTTGGTTCCATATGAAGTTTAAAGTAGTTTTTTTTTCAATTCTGTGAAGAAATTCAGTGGTAGCTTGATGGGGATAGCATTGAATCTATAAATTACTTTGGGCAGTATGGCCATTTTCACAATACTGATTCTGCCTCTCCATGAGCGTGGAATGTTTATCTATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTATCCTTGAAGAGTTCCTTCACACCCGTTGTAAGTTGGATTCCAAGGTATTTTATTCTCTTAGTAGCAATTGTGGATGCGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTATTATTGGTGTATAGGAATGTTTGTGATTTTTGCACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAAATTTTGGGCTGAGACGATGGGGTTTTCTAAGTATACAATCATGTCATCTGCAAACAAAGACAATTTGACTTTCTCTCTACCTATTTGAATACCCATTATTGCTTTCTCTTACCTGATTGCCCTGGCCAGAACTTCCAATACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCTTGTCTTGTGCCGGTTTTCAATGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTTCCTGTGGGTTTGTCATAAATAGCTCTTGTTATTTTTGAGATATGTTCCATCGATACCTAGTTCATTGAGAGTTTTTAGCATGAAGCGGTGTTGAATTTTAATGAAGGCCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCATTGGTTCTGTTTATGTGATGGATTACGTTTATTGATTTGGGTATGCTGAACCAGCCTTGTATCCCAGGGATGAAGCCAACTTGATCATGGTGGACAAGCCTTTTGATGTGCTGCTGGATTTGGTTTGCAGTATTTTATTGGGGATTTTCGCATCAATGTTCATCAGGGATATTGGCCTGAAATTTTCTTTTTTTGTTGTGTCTCTGCCAGGTTTTGGTATCAAAGATGATGCTGTCCTCATAAAATGAGTTAGGGAGGAGTCCCTCTTTTTGTATTGTTTGGAATACTTTCAGAAGGAATGGTACCAGCTCCTCTTTGTACCTCTGATAGAATTTGGCTGTGAATCCCTCTGGTCCTGGACTTTTTTTGGTTGGTAGGCTAGTAATTATTGCCTCAATTTCAGAACTTGTTACGGGTCTATTCAGAGATTTGACTTCTTCCTGCCTTAGAGTTGGGAGGGTGTATGTGTCCAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGTATAGAGGTGTTTATAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCAGTGGTGATATCCTCTATATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTCATCTTTATTAGACTGGCTAGTGGTCTATCTATTTTGTTGATCTTTACAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTCGTGTCTCTATCTCCTTCAGTTCTGCACTGATCTTAGTGATTTCATGTCTTCTGCTAGCTTTTGAATTTGTTTGGTGTTTCTTCTCTAGTTCTTTTAATTTTGATGGTAGGGTGTCAATTTTAGATCTTTCCTGCTTTCTCTTGTGGACATTTAGTGCTATAAATTTCCCTCTGAACACTGCTTTAAATGTGTTCCAGAGATTCTGGTATGTTGTGTCTTTGGTCTCATCAGTTTCAAAGAACATGCTGTTATTATTATTATTGT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11290:HG2_PB_PB10Xdip_26441:HG2_PB_HySA_15721:HG3_PB_HySA_13101:HG2_Ill_breakscan11_3887:HG2_PB_HySA_15720:HG2_PB_HySA_15719:HG3_PB_SVrefine2PBcRDovetail_3885:HG4_PB_SVrefine2Falcon1Dovetail_5221:HG3_PB_SVrefine2Falcon1Dovetail_5225:HG4_Ill_SVrefine2DISCOVARDovetail_6279:HG2_PB_SVrefine2Falcon2Bionano_4175:HG2_PB_SVrefine2PB10Xhap12_6258:HG3_Ill_SVrefine2DISCOVARDovetail_6439:HG2_PB_SVrefine2PBcRplusDovetail_10496:HG2_Ill_SVrefine2DISCOVARplusDovetail_12398:HG2_10X_SVrefine210Xhap12_6134;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12398:HG2_PB_SVrefine2PBcRplusDovetail_10496:HG3_Ill_SVrefine2DISCOVARDovetail_6439;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0242086;ClusterMaxSizeDiff=0.0229671;ClusterMaxEditDist=0.0887647;PBcalls=12;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=3224;DistBack=6648;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2750;REFWIDENED=7:130449232-130451981;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=5143.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:44:0|1:20:4:0:28:./.:0:0:0:0:0/1:8:11:0/1:78:173:.:3157:.
chr7	132292517	HG2_PB_SVrefine2PB10Xhap12_6271	G	GCATCACATCATCATTATCACCATCACCACCATCATCATCATCATCACTATCACCATCACTGCCATCATCATCATCCATATCACCATCACCACCATCACTCCCATCATCCTCATCACTATCACCATCAACACCATCACCACCATCATCCTTATCACTATCACCATCACCACCATCACCGCCATCATCCTCATCACTATCACCATCACCACCATCACTGCCATCATCCTCATCTCTATCACCATCACTGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5233:HG2_PB_SVrefine2Falcon1plusDovetail_11301:HG4_PB_SVrefine2PBcRDovetail_4260:HG3_PB_SVrefine2PBcRDovetail_3894:HG3_PB_SVrefine2Falcon1Dovetail_5237:HG3_Ill_SVrefine2DISCOVARDovetail_6448:HG2_PB_SVrefine2PBcRplusDovetail_10505:HG2_PB_SVrefine2PB10Xhap12_6271:HG2_PB_SVrefine2Falcon2Bionano_4184:HG2_Ill_SVrefine2DISCOVARplusDovetail_12409;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12409:HG2_PB_SVrefine2Falcon2Bionano_4184:HG2_PB_SVrefine2PB10Xhap12_6271:HG2_PB_SVrefine2PBcRplusDovetail_10505:HG3_Ill_SVrefine2DISCOVARDovetail_6448:HG3_PB_SVrefine2Falcon1Dovetail_5237:HG3_PB_SVrefine2PBcRDovetail_3894:HG4_PB_SVrefine2PBcRDovetail_4260;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0121212;ClusterMaxSizeDiff=0.0121212;ClusterMaxEditDist=0.0283976;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=248;DistBack=12731;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=410;REFWIDENED=7:132292518-132292927;PctSeqSimilarity=0.9655;PctSizeSimilarity=0.9725;PctRecOverlap=0;SizeDiff=-7;StartDistance=-313;EndDistance=-313;GTMatch=0;TruScore=64;MatchId=5151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:56:./.:0:9:0:1:./.:0:0:0:0:./.:4:1:./.:.:.:.:.:.
chr7	144185575	HG2_PB_SVrefine2PB10Xhap12_6330	G	GCCACATGAACTCACACACGTGCACGTAGAGGCACACACATGGGTGCACCCACATGCACACACACACGTGCACGTAGAGGCACACACATGGGTGCACCCACATGCACACACACACGTGCACGTGGAGGCACACACATGGGTGCACCCACATGCACACACACACGTGCACGTGGAGGCACACACATGGGTGCACCCACATGCACACACACACGTGCACGTGGAGGCACACACATGGGTGCACCCACATGCACACACACACGTGCACGTGGAGGCACACACATGGGTGCAC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5290:HG2_PB_pbsv_8663:HG2_PB_PB10Xdip_26674:HG3_PB_pbsv_8437:HG4_Ill_SVrefine2DISCOVARDovetail_6343:HG4_PB_pbsv_8675:HG2_PB_SVrefine2PBcRplusDovetail_10551:HG2_PB_SVrefine2PB10Xhap12_6330:HG2_PB_SVrefine2Falcon1plusDovetail_11351:HG2_Ill_SVrefine2DISCOVARplusDovetail_12471:HG4_PB_SVrefine2Falcon1Dovetail_5284:HG4_PB_SVrefine2PBcRDovetail_4311:HG3_PB_SVrefine2PBcRDovetail_3931;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12471:HG2_PB_SVrefine2Falcon1plusDovetail_11351:HG2_PB_SVrefine2PB10Xhap12_6330:HG2_PB_SVrefine2PBcRplusDovetail_10551:HG4_Ill_SVrefine2DISCOVARDovetail_6343;NumExactMatchSVs=5;ClusterMaxShiftDist=0.275992;ClusterMaxSizeDiff=0.275992;ClusterMaxEditDist=0.340265;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=288;DistBack=-288;DistForward=-1;DistMin=-288;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=401;REFWIDENED=7:144185576-144185976;PctSeqSimilarity=0.9892;PctSizeSimilarity=0.9861;PctRecOverlap=0;SizeDiff=4;StartDistance=-315;EndDistance=-315;GTMatch=0;TruScore=65;MatchId=5170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:2:15:2:28:./.:0:0:0:0:./.:1:0:./.:.:.:.:.:.
chr7	152569405	HG2_PB_SVrefine2PBcRplusDovetail_10590	A	AGGCCACGCAGGAGGGGCAGTCTGGTGACCACGCAAGAGGGGACGTCTGGTGGCCATGCAGGAAGGGTGGTCCAGTGGCCGGGCAGGAGGGGTGGTCAGGTGGCCACGCAGGAGGGGCGGTCAGGTGGCCACGCAGGAGGGGCGGTCTGGTGGCTATGTAGGAGGGGCGGTCTGGTGGGGCCATCTGGTGGCCACGCAAGAGGGGACGTCTGGTGACCATGCAAGAGGGGACGTCTGGTGGCCATGCAGGAAGGGTGGTCCAGTGGCCGGGCAGGAGGGGCGGTCAGGTGGCTATGCAGGAGGGGCGGTCTGGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11393:HG3_PB_SVrefine2Falcon1Dovetail_5328:HG4_PB_SVrefine2PBcRDovetail_4350:HG2_PB_PB10Xdip_26753:HG2_PB_HySA_15985:HG2_PB_pbsv_8731:HG4_PB_SVrefine2Falcon1Dovetail_5309:HG3_PB_SVrefine2PBcRDovetail_3957:HG2_PB_SVrefine2PBcRplusDovetail_10590:HG2_PB_SVrefine2PB10Xhap12_6389:HG2_PB_SVrefine2Falcon2Bionano_4266;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4266:HG2_PB_SVrefine2PB10Xhap12_6389:HG2_PB_SVrefine2PBcRplusDovetail_10590:HG3_PB_SVrefine2PBcRDovetail_3957:HG4_PB_SVrefine2Falcon1Dovetail_5309:HG4_PB_SVrefine2PBcRDovetail_4350;NumExactMatchSVs=6;ClusterMaxShiftDist=0.22695;ClusterMaxSizeDiff=0.22695;ClusterMaxEditDist=0.36136;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=313;DistBack=-1;DistForward=318;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=429;REFWIDENED=7:152569406-152569834;PctSeqSimilarity=0.9521;PctSizeSimilarity=0.9585;PctRecOverlap=0;SizeDiff=13;StartDistance=-319;EndDistance=-319;GTMatch=0;TruScore=63;MatchId=5183.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:30:./.:2:6:0:2:./.:0:0:0:0:1/1:1:9:./.:1:6:.:.:.
chr7	154540679	HG3_PB_SVrefine2Falcon1Dovetail_5341	A	AAGGGATGGGGGCTTTACTGAGAGAGGGTGAGGGAGGATAGGACGGGACAGGAGAGAGAGGGATGGAGGCTTTACTGAGAGAGGGTGAGGGAGCATAGGATGGGAAAGAGAGGGATGGAGGCTTTACTGAGAGAGGGTGAGAGAGCATAGGACCGGAAAGAGAAGGATGGCGGCTTTACTGAGAGAGGGTGAGGGAGCATAGGACAGGAGGGAGAGGGATGGCGGCTTTACTGAGAGAGGGTGAGGGAGCATAGGACGGGGAGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11405:HG3_PB_HySA_13343:HG2_PB_pbsv_8757:HG2_PB_HySA_16031:HG3_PB_SVrefine2Falcon1Dovetail_5341:HG2_PB_SVrefine2Falcon2Bionano_4279:HG3_PB_SVrefine2PBcRDovetail_3966;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_5341;NumExactMatchSVs=1;ClusterMaxShiftDist=0.194872;ClusterMaxSizeDiff=0.190641;ClusterMaxEditDist=0.282794;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=264;DistBack=-1090;DistForward=-1;DistMin=-1090;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1090;REFWIDENED=7:154540680-154541769;PctSeqSimilarity=0.9771;PctSizeSimilarity=0.9773;PctRecOverlap=0;SizeDiff=6;StartDistance=-262;EndDistance=-262;GTMatch=0;TruScore=65;MatchId=5188.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:20:./.:1:11:17:10:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr7	155125830	HG2_PB_SVrefine2PB10Xhap12_6424	C	CCTCAGTCCTCATTACTCTCAGTCCTCACTGATCTCAGTCCTCATTGCTCTCAGTCCTCATTGATCTCAGTCCTCATTGATCTCGGTCCTCATTCCCCTCGGTCCTCATTGCCCTTGGTCCTCACTGATCTCAGTCCTCATTGATCTCGGTCCTCATTGCCCTCAGTCCTCATTGATCTCGCTCCTCGTTGCCCTCAGTCCTCATTGATCTCGGTCCTCATTCCCCTCAGTCCTCATTCCCCTCGGTCCTCATTGCCCTCGGTCCTCATTAATCTCAGTCCTCATTGCCCTCAGTCGTCATTGATCTCAGTCCTCATTGCCCTCAGTCCTCATTCCCCTCAGTCCTCATTGCCCTCAGTCGTCATTGATCTCAGTCCTCATTGATCTCAGTCCTCATTGATCTCAGTGCTCATTGCCCTCAGTCCTCATTGCTCTCAGTCCTCATTGCTCTCAGTCGTCATTGATCTCAGTCGTCATTGATCTCGGTCCTCATTCCCCTCAGTCCTCATTCCCCTCAGTCCTCATTCCCCTTGGTCCTCATTGCCCTCGGTCCTCATTGATCTCATTCCTCATTGATCTCAGTCCTCATTGCCCTCAGTCCTCATTGATCTCGGTCCTCATTCCCCTCAGTCCTCATTGTCCTCAGTCCTCATTGATCTCAGTCCTCATTGCCATCAGTCCTCATTCCCCTCAGTCCTCATTGCCCTCAGTCCTCATTGAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6424:HG4_PB_SVrefine2Falcon1Dovetail_5330:HG3_PB_SVrefine2Falcon1Dovetail_5351:HG2_PB_SVrefine2Falcon1plusDovetail_11415:HG2_PB_SVrefine2Falcon2Bionano_4288:HG2_PB_SVrefine2PBcRplusDovetail_10618;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6424:HG2_PB_SVrefine2PBcRplusDovetail_10618;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0220083;ClusterMaxSizeDiff=0.0220083;ClusterMaxEditDist=0.0276625;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=720;DistBack=-1;DistForward=847;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2061;REFWIDENED=7:155125831-155127891;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=5193.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:34:./.:0:0:0:0:./.:0:0:0:0:./.:0:0:0/1:4:13:.:2008:.
chr7	157254889	HG2_PB_SVrefine2PB10Xhap12_6450	G	GGGCGGGACACAGGTGAGCCCGCTGGCTGGGGAGGGTGTGGGTGGGACACAGGTGAGCCCGCTGGCTGGGGAGGGTGTGGGTGGGACACAGGTGAGCCTGCTGGCTGGGGAAGGTGTC	10	PASS	ClusterIDs=HG2_PB_pbsv_8818:HG2_PB_PB10Xdip_26843:HG2_PB_SVrefine2PBcRplusDovetail_10638:HG2_PB_SVrefine2PB10Xhap12_6450:HG3_PB_SVrefine2Falcon1Dovetail_5375:HG4_PB_SVrefine2Falcon1Dovetail_5353:HG2_PB_HySA_16139;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6450:HG2_PB_SVrefine2PBcRplusDovetail_10638;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0829876;ClusterMaxSizeDiff=0.0753138;ClusterMaxEditDist=0.251046;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=117;DistBack=20;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=237;REFWIDENED=7:157254665-157254901;PctSeqSimilarity=0.9771;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=166;EndDistance=166;GTMatch=0;TruScore=65;MatchId=5206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:27:./.:9:13:15:10:./.:0:0:0:0:0/1:5:6:./.:.:.:.:.:.
chr7	157262978	HG2_PB_SVrefine2Falcon2Bionano_4309	T	TGGCGCTGGCCTGGGTTGGGTGTGTCCGTGTGTCCAGTGCTGGCCTGCGTTGGGTGTGTCCGTGTGTCCGGCGCTGGCCTGCGTTGGGTGTGTCCGTGTGTCCGGCGCTGGCCTGCGTTGGGTGTGTCCGTGTGTCCGGCGCTGGCCTGGGTTGGGTGTGTCCGTGTGTCCGGCGCTGGCCTGGGTTGGGTGTGTCCGTGTGTCCGGCGCTGGCCTGGGTTGGGTGTGTCCGTGTGTCCGGCGCTGGCCTGGGTTGGGTGTGTCCGTGTGTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6451:HG2_PB_HySA_16141:HG2_PB_pbsv_8820:HG3_PB_SVrefine2Falcon1Dovetail_5376:HG3_PB_pbsv_8598:HG2_PB_SVrefine2PBcRplusDovetail_10639:HG2_PB_SVrefine2Falcon2Bionano_4309:HG2_PB_SVrefine2Falcon1plusDovetail_11437;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11437:HG2_PB_SVrefine2Falcon2Bionano_4309:HG2_PB_SVrefine2PBcRplusDovetail_10639:HG3_PB_SVrefine2Falcon1Dovetail_5376;NumExactMatchSVs=4;ClusterMaxShiftDist=0.173077;ClusterMaxSizeDiff=0.161538;ClusterMaxEditDist=0.269231;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=272;DistBack=6320;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=474;REFWIDENED=7:157262979-157263452;PctSeqSimilarity=0.9838;PctSizeSimilarity=0.9926;PctRecOverlap=0;SizeDiff=2;StartDistance=-285;EndDistance=-285;GTMatch=0;TruScore=65;MatchId=5207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:./.:16:55:0|1:14:4:0:48:./.:0:0:0:0:0/1:11:7:./.:.:.:.:.:.
chr7	158248561	HG4_Ill_250bpfermikitraw_12091	T	TGCCATCGGCCATGGCCACCCATCGCTCTGCAGAGAAGATAACAGCATGGAC	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12140:HG4_PB_pbsv_8947:HG4_Ill_scalpel_8369:HG4_Ill_GATKHC_14582:HG4_Ill_250bpfermikitraw_12091:HG2_Ill_GATKHC_14533;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12140:HG4_Ill_scalpel_8369:HG4_Ill_GATKHC_14582:HG4_Ill_250bpfermikitraw_12091:HG2_Ill_GATKHC_14533;NumExactMatchSVs=5;ClusterMaxShiftDist=0.113208;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.188679;PBcalls=1;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=13;DistForward=246;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=22;REFWIDENED=7:158248560-158248584;PctSeqSimilarity=0.6529;PctSizeSimilarity=0.25;PctRecOverlap=0.1268;SizeDiff=-153;StartDistance=102;EndDistance=102;GTMatch=0;TruScore=34;MatchId=5226.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:18:./.:22:9:5:12:./.:0:0:0:0:0/1:15:7:./.:.:.:.:.:.
chr8	1563643	HG2_PB_SVrefine2PBcRplusDovetail_10762	G	GATGGTAGAACTCACCAGAAAGATCTTTAAACAGCCATTGTAAGGTCTTATGAATGATATAAAAATGTTAGAACTCACCGGAAAGATCTTTAAAGCAGCCATTGTAAGGTCTTATGAATGATACAAAAATGTTAGAATTCACCGGAAAGATCTTTAAACAGCCATTGTAGTCTTATGAATGATATAAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11572:HG3_PB_SVrefine2Falcon1Dovetail_5541:HG2_PB_pbsv_9068:HG3_PB_pbsv_8848:HG3_Ill_GATKHC_14622:HG2_PB_PB10Xdip_29494:HG2_Ill_GATKHC_14647:HG2_Ill_GATKHCSBGrefine_6145:HG2_PB_SVrefine2PBcRplusDovetail_10762:HG2_PB_SVrefine2PB10Xhap12_6616;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11572:HG2_PB_SVrefine2PBcRplusDovetail_10762:HG2_PB_SVrefine2PB10Xhap12_6616;NumExactMatchSVs=3;ClusterMaxShiftDist=0.183844;ClusterMaxSizeDiff=0.183844;ClusterMaxEditDist=0.261364;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=188;DistBack=10873;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=508;REFWIDENED=8:1563644-1564151;PctSeqSimilarity=0.9813;PctSizeSimilarity=0.9792;PctRecOverlap=0;SizeDiff=-4;StartDistance=-318;EndDistance=-318;GTMatch=0;TruScore=65;MatchId=5260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:37:0|1:27:3:2:34:./.:0:0:0:0:0/0:12:0:./.:.:.:.:.:.
chr8	1760663	HG3_PB_SVrefine2PBcRDovetail_4071	G	GGATGGAGGGGAACCCCCACTGGAGGAGAGACAGGGAGCTGTGAGGGATCCTGGGATGGAGGGGAGCCCACACTGGGTGATGGACAGGGAGATATGAGGGGTCCTGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4421:HG2_PB_PB10Xdip_29513:HG2_PB_SVrefine2Falcon1plusDovetail_11579:HG2_PB_pbsv_9078:HG3_PB_SVrefine2PBcRDovetail_4071:HG2_PB_SVrefine2PBcRplusDovetail_10769:HG2_PB_SVrefine2PB10Xhap12_6624;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4421:HG3_PB_SVrefine2PBcRDovetail_4071:HG2_PB_SVrefine2PBcRplusDovetail_10769:HG2_PB_SVrefine2PB10Xhap12_6624;NumExactMatchSVs=4;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.00938967;ClusterMaxEditDist=0.322581;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=106;DistBack=1;DistForward=90;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=225;REFWIDENED=8:1760664-1760888;PctSeqSimilarity=0.9669;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-150;EndDistance=-150;GTMatch=0;TruScore=65;MatchId=5262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:21:0|1:14:4:2:11:./.:0:0:0:0:0/0:23:0:./.:.:.:.:.:.
chr8	1764327	HG2_PB_SVrefine2PB10Xhap12_6626	G	GGCGTTCTAACGAGATGGGGTGCAGCGTTCTAACCAGACGGGGTGCAGCGTTCTAACGAGACGGGGTGCAGCGTTCTAACGAGACGGGGTGCAGCGTTCTAACCAGATGGGGTGCAGCGTTCTAACGAGATGGGGTGCAGCGTTCTAACCAGATGGGGTGCAGCGTTCTAACGAGATGGGGTGCAGCGTTCTAACGAGATGGGGTGCAGCGTTCTAACCAGATGGGGTGCAGCGTTCTAACGAGATGGGGTGCAGCGTTCTAACCAGATGGGGTGCAGCGTTCTAACGAGACGGGGTGCAGCTTTCTAACGAAATGGGGTGCAGCGTTCTAACGAGACGGGGTGCAGCGTTCTAACGAGACGGGTGCAGCGTTCTAACGAGATGGGGTGCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11581:HG3_PB_HySA_13606:HG2_PB_pbsv_9079:HG2_PB_HySA_16343:HG2_PB_PB10Xdip_29514:HG2_PB_PB10Xdip_29515:HG4_PB_pbsv_9113:HG4_PB_HySA_13192:HG4_PB_SVrefine2PBcRDovetail_4495:HG4_PB_SVrefine2Falcon1Dovetail_5520:HG3_PB_SVrefine2PBcRDovetail_4072:HG2_PB_SVrefine2PBcRplusDovetail_10770:HG2_PB_SVrefine2PB10Xhap12_6626:HG2_PB_SVrefine2Falcon2Bionano_4423;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11581:HG3_PB_SVrefine2PBcRDovetail_4072:HG2_PB_SVrefine2PBcRplusDovetail_10770:HG2_PB_SVrefine2PB10Xhap12_6626:HG2_PB_SVrefine2Falcon2Bionano_4423;NumExactMatchSVs=5;ClusterMaxShiftDist=0.103493;ClusterMaxSizeDiff=0.100906;ClusterMaxEditDist=0.293168;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=390;DistBack=2023;DistForward=240;DistMin=240;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=509;REFWIDENED=8:1764328-1764836;PctSeqSimilarity=0.982;PctSizeSimilarity=0.9974;PctRecOverlap=0;SizeDiff=1;StartDistance=-443;EndDistance=-443;GTMatch=0;TruScore=65;MatchId=5263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:19:0:20:./.:0:0:0:0:./.:0:0:./.:1:5:.:1734:.
chr8	8308221	HG2_Ill_150bpfermikitraw_11588	C	CTCTGGATGCAGACACTGGAATGGATGAGTTTTGAAGAGGCATTGCATTTT	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12324:HG3_PB_HySA_13728:HG4_Ill_GATKHCSBGrefine_6343:HG2_Ill_Krunchall_12639:HG2_Ill_GATKHC_14782:HG2_Ill_GATKHCSBGrefine_6210:HG2_Ill_250bpfermikitraw_12325:HG2_Ill_150bpfermikitraw_11588:HG4_PB_HySA_13286:HG4_PB_assemblyticsfalcon_25530:HG4_PB_pbsv_9212:HG4_Ill_Krunchall_12920:HG4_Ill_250bpfermikitraw_12286:HG3_PB_assemblyticsfalcon_25994:HG3_Ill_GATKHCSBGrefine_6144:HG3_Ill_250bpfermikitraw_11987:HG2_PB_PB10Xdip_30577:HG2_PB_PB10Xdip_30578:HG2_PB_HySA_16480:HG2_PB_assemblyticsPBcR_25287:HG3_Ill_250bpfermikitraw_11986:HG3_PB_pbsv_8959:HG2_PB_SVrefine2Falcon2Bionano_4477;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11588:HG2_Ill_250bpfermikitraw_12325:HG2_Ill_GATKHCSBGrefine_6210:HG2_Ill_GATKHC_14782:HG2_Ill_Krunchall_12639:HG4_Ill_GATKHCSBGrefine_6343;NumExactMatchSVs=6;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.4;PBcalls=11;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=50;DistBack=-1;DistForward=31183;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=156;REFWIDENED=8:8308169-8308324;PctSeqSimilarity=0.9857;PctSizeSimilarity=0.9615;PctRecOverlap=0;SizeDiff=-2;StartDistance=53;EndDistance=53;GTMatch=0;TruScore=64;MatchId=5280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:3:16:0:18:./.:0:0:0:0:0/1:17:16:./.:.:.:4167043:.:.
chr8	11312865	HG2_PB_SVrefine2Falcon2Bionano_4493	G	GGAGTGTGAGTGTGGGATGGTTGCCTTGCGTGAGTGTGATTGTGAGTGTGGGGGGTGGCTGCTCTGCTGGGTGTGTGTGAGTGTGGGGGGTGGCTGCTCTGCTGGGTATGTGTGAGTGTGGGGAGTGGTTGCCCTGATGGGTGTGTGAGTGTGAGTGTGTGGGGTGGTTGCCCTGCTGGGTGTGTGAGTCTGAGTGTGGGGGGTGGTTGCCTTGCTTTGAGTTTGAGTGTGGGATGGTTGCCTCACCTGAGTGTGAGTGTGCAGGGTGGTTGCTCTGCTGGGTGTGAGTGTTGGGGGTGGTTGCCTTGCTGTGTGTGAATGTGAGTGTGGGTGTGGGGGATGGTTGCTCTGCGGGGTGTATGAGTGTGTGAGTGTCGGGGGTGGTTGCCTTGCTGTGCATGAGTGTGAGTGTATTGGGGGTGGTTGCCCTGCTGGGGTTGTGTGAGTGTTGGGTGGTTGCCTTGCTGTGTATGAGTGTGAGTGTGAGGGTTGGTTGCCTTATGGGTAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4142:HG2_PB_SVrefine2PB10Xhap12_6745:HG2_PB_SVrefine2Falcon2Bionano_4493:HG2_PB_SVrefine2PBcRplusDovetail_10846:HG2_PB_SVrefine2PB10Xhap12_6744;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4493:HG2_PB_SVrefine2PB10Xhap12_6745;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0650406;ClusterMaxSizeDiff=0.0650406;ClusterMaxEditDist=0.097561;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=507;DistBack=-1221;DistForward=750;DistMin=-1221;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1263;REFWIDENED=8:11312866-11314128;PctSeqSimilarity=0.9298;PctSizeSimilarity=0.9441;PctRecOverlap=0;SizeDiff=-30;StartDistance=-866;EndDistance=-866;GTMatch=1;TruScore=62;MatchId=5291.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:5:28:1/1:4:13:1:14:./.:0:0:0:0:./.:0:0:./.:1:8:4167043:665:.
chr8	102695517	HG4_PB_SVrefine2PBcRDovetail_4818	C	CAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCAACATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGGAAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCATTATTCACAATAGCAAAGAGTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTGGGGGGAGTGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAAAAAAAAAAAAAAAAAAGACCTTGTCTTATACCTTAGGATCATCACTGCAAAAATAATAAAATCAACTAACATTCAAAAAAAAAAAAAGTCAACACATATATATATATGTGTGAGAGATATATATCATATCTCTCATATCACATATTACATATGTGAGAGATATATGATATATATATCATATATGTAAGAGATATGTATCATATTTCTCATATATATATATGATATACATGGTAAAGAGTGCTCTGCAATTGTTGGATATAATGTTCTATAAGCCAAATTAGGTCAGTTTGGTTAATGTCATTCTAAACTTCCGTATCCTTTTCTTTTGTATGCTTTTTCTATTAGTTATTGAAATTGGTCATAGCCTATGATTGTAGATTTGTATATGACTCCTTTAGTTCTTTCAACTTTTGCTTTATACAATTAAATTTTGTGCTAATTAGGTATTGAAAACTTTGTGATTTTATAGCTTGCTATGGACTTAACCCTTTTATGACTTTGAAATGTACATCTTTATATTTTGCACTTCTACTTAAGATCTACTTTTTTCACTATTAATTTAACCATATAATTTTTCTTTTGTTAATATATGGTAGACTTATTTTTGTCTTTATACTTTTTAACTATGTATTCATACATATGCTTACAATGTTACTTCTGTAAACAGAATAAAACTGCATTTTTTTCAAAAAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4818:HG2_PB_SVrefine2PBcRplusDovetail_11146:HG2_PB_SVrefine2Falcon1plusDovetail_11941;NumClusterSVs=3;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_4818;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00947226;ClusterMaxSizeDiff=0.00947226;ClusterMaxEditDist=0.0122034;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1484;DistBack=25805;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2282;REFWIDENED=8:102695518-102697799;PctSeqSimilarity=0.9978;PctSizeSimilarity=1;PctRecOverlap=0.4694;SizeDiff=0;StartDistance=-788;EndDistance=-788;GTMatch=1;TruScore=82;MatchId=5435.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:19:22:1|0:4:18:11:2:./.:6:3:4:0:0/0:21:0:0/1:46:27:.:1260:.
chr8	106892002	HG4_PB_SVrefine2Falcon1Dovetail_5921	TTA	GTATTTACATATATATTCACACATATATATGTATTTACATATATATTCACACATATATATGTATTTACATATATATTCACACATATATATGTATTTTACATATATATTCACACATATATATGTATTTACATATATATTCACACATATATGTATTTACATATATATTCACACATATATGTATTTACATATATATTCACATATATATTT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4827:HG4_PB_assemblyticsfalcon_26279:HG4_PB_SVrefine2Falcon1Dovetail_5921:HG4_PB_HySA_14044:HG2_PB_SVrefine2PBcRplusDovetail_11160:HG2_PB_SVrefine2PB10Xhap12_7026:HG3_PB_SVrefine2PBcRDovetail_4409:HG2_PB_SVrefine2Falcon2Bionano_4512:HG3_PB_pbsv_9413:HG2_PB_pbsv_9662:HG3_PB_SVrefine2Falcon1Dovetail_5881;NumClusterSVs=11;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_5921:HG4_PB_assemblyticsfalcon_26279;NumExactMatchSVs=2;ClusterMaxShiftDist=0.33253;ClusterMaxSizeDiff=0.33253;ClusterMaxEditDist=0.369159;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=204;DistBack=88;DistForward=28726;DistMin=88;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=446;REFWIDENED=8:106891556-106892001;PctSeqSimilarity=0.9757;PctSizeSimilarity=0.8824;PctRecOverlap=0;SizeDiff=24;StartDistance=361;EndDistance=363;GTMatch=1;TruScore=61;MatchId=5439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:79:1/1:1:38:3:36:./.:0:0:0:0:0/0:39:0:./.:.:.:.:.:.
chr8	118109666	HG2_PB_SVrefine2Falcon2Bionano_4538	A	AAATATATATAATTATATATTATATATAATATGTATTTATTTTAAATAAATATATTTTAAATATATATTATATATAATATATAATTTTAAATAATATATATTATATATAATATATAATTTTAAATAATATATATTATATATAATATATAATTTTAAATAATATATATTATATATAATATATAATTTTAAATAATATATATTATATATAATATATAATTTTAAAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7060:HG2_PB_pbsv_9710:HG2_PB_SVrefine2Falcon1plusDovetail_11987:HG4_PB_pbsv_9730:HG2_PB_SVrefine2PB10Xhap12_7061:HG2_PB_SVrefine2Falcon2Bionano_4538:HG3_PB_SVrefine2Falcon1Dovetail_5924:HG4_PB_SVrefine2Falcon1Dovetail_5952:HG4_PB_SVrefine2PBcRDovetail_4854:HG3_PB_pbsv_9459:HG2_PB_SVrefine2PBcRplusDovetail_11195:HG3_PB_SVrefine2PBcRDovetail_4436;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4538:HG2_PB_SVrefine2PB10Xhap12_7061;NumExactMatchSVs=2;ClusterMaxShiftDist=0.314286;ClusterMaxSizeDiff=0.314286;ClusterMaxEditDist=0.380952;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=223;DistBack=-653;DistForward=182;DistMin=-653;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=460;REFWIDENED=8:118109667-118110126;PctSeqSimilarity=0.9722;PctSizeSimilarity=0.9489;PctRecOverlap=0;SizeDiff=-12;StartDistance=-327;EndDistance=-327;GTMatch=0;TruScore=64;MatchId=5456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:38:./.:1:4:0:1:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr8	134553165	HG3_Ill_250bpfermikitraw_12955	T	TATATATAGACACATATATAGACATATATAGACATATATAGACATATATATAGACATATATAGAC	10	PASS	ClusterIDs=HG2_Ill_scalpel_9415:HG4_Ill_250bpfermikitraw_13241:HG4_Ill_150bpfermikitraw_12686:HG3_Ill_250bpfermikitraw_12955:HG3_Ill_150bpfermikitraw_12565:HG2_Ill_250bpfermikitraw_13349:HG2_Ill_150bpfermikitraw_12528:HG4_Ill_scalpel_9161:HG3_Ill_scalpel_9523;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12528:HG2_Ill_250bpfermikitraw_13349:HG3_Ill_150bpfermikitraw_12565:HG3_Ill_250bpfermikitraw_12955:HG4_Ill_150bpfermikitraw_12686:HG4_Ill_250bpfermikitraw_13241;NumExactMatchSVs=6;ClusterMaxShiftDist=0.169014;ClusterMaxSizeDiff=0.169014;ClusterMaxEditDist=0.183099;PBcalls=0;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=64;DistBack=23;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=7;REFWIDENED=8:134553164-134553173;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=5491.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:8:36:1/1:4:14:4:19:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr8	139754141	HG2_PB_SVrefine2PBcRplusDovetail_11285	T	TATGGTAGTGATGGAGTTGATGGTGATGGTGATGATGGTGGTGATGGTGATGATAGTAGTGATGGTGATGGTGATGGTAGAGTTGATGGTGATGGTGGAGTTGATGGTGATGGTGATGGTAGAGTTGATGGTGATGGTGGAGTTGATGGTGATGGTGATGGTAGAGTTGATGGTGATGGTGATGATGGTGATGATAGTAGCCATGGTGATGGTGATGGTGGAGTTGATAGTGATGGTGGTAGTGATTGTGATGATGGTGGAGTTGATGGTGATGGTGATGGTAAAGTTGATGATGGTAATAGTGATCGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12076:HG4_PB_SVrefine2PBcRDovetail_4935:HG4_PB_SVrefine2Falcon1Dovetail_6052:HG3_PB_SVrefine2PBcRDovetail_4511:HG3_PB_SVrefine2Falcon1Dovetail_6025:HG2_PB_SVrefine2PBcRplusDovetail_11285:HG2_PB_SVrefine2PB10Xhap12_7163:HG2_PB_SVrefine2Falcon2Bionano_4624;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12076:HG4_PB_SVrefine2PBcRDovetail_4935:HG4_PB_SVrefine2Falcon1Dovetail_6052:HG3_PB_SVrefine2PBcRDovetail_4511:HG3_PB_SVrefine2Falcon1Dovetail_6025:HG2_PB_SVrefine2PBcRplusDovetail_11285:HG2_PB_SVrefine2PB10Xhap12_7163:HG2_PB_SVrefine2Falcon2Bionano_4624;NumExactMatchSVs=8;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=309;DistBack=29262;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=379;REFWIDENED=8:139754142-139754520;PctSeqSimilarity=0.9462;PctSizeSimilarity=0.9364;PctRecOverlap=0;SizeDiff=-21;StartDistance=-386;EndDistance=-386;GTMatch=0;TruScore=62;MatchId=5506.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:39:./.:0:0:0:0:./.:0:0:0:0:./.:4:0:1/1:0:10:.:.:.
chr8	144492486	HG2_PB_SVrefine2PB10Xhap12_7260	G	GATGATGGTGGAGATGGTGGTGGTGGTGATGATGATGACAATGATAATGATGATGGTGATGGCAGTGGTGGTAGTGGTGATGGTGCTGGTGGTGCTGGTGATATGATGATGGCAGTGATGGTAGTGATAATAGTGATGATAATGTGATGGTAGTGATGGTGGTGGCAGTAATAGTGATGGTGATGGTGGCAGAGAGGGTGGTGACAGTGATGTCAGTGGTAATGGTGGTGGTGATGGTAATGGTGATGGTGGTGGTGGTGATGATGGTGGTGATAGTGGTAGTGATGGTGTGGTGGAAATGATGGCTGTGATCGTGATGATGATGGTAGTGATGGTTACAATGATAGTGGTGGTAGTGGTGGTGATGGCAATGATGGTATTGATGGTGATGGTGGTGGTGGTGGTAGTGATGGTGGTGGTGGTAGATGGTGGCAGTGAAGACGGTGGTAATGGTAGATGGTGGCAGTGAAGATGGTGGTAATGATGGTAATGGTGATAGTGGTGCTGGTGGTGATGGTGATGGTGGTGGTGGTGGTAGTGATGATGATGATGATGGTGATAGTGATGGTGGTGGTGGTGGTAGTGGTGGTGAGTGGCTGTCATGGCAGTGATGGTGATGATGATGGTGGTGGTGGTGATGGTGGATGATGATATAGATGATGATGGTAGTGGTGCTAGTGATAGTGGTGGAGGTGGTGATGGTGGTGGTAGTGATGGTGATGATGGTGATAGTGCTGGTGGTGGTGGTAGTGATGGTGATAGTGATGGTGGTGGTGGTAGTAGTGGTGGTGGGTGGCTGTCATGGCAGTGATGGTGATGATGGTGGTGGTGGTGATGGTGGATGATGATATAGATGATGATGGTAGTGGTGGTAGTGATAGTGGTGGAGGTGGTGATAGTGGTGGTGGTGGAGATGGTGGTGATAGTGACAATGGTGGTAGCGGTGGTGATGGCAATGATGGTTGTGATGGTGATGGTTGTGGTGGCAGTGATGGTGTTGGTGGTGGTAGTGATGGTAATGGTGATAGTGGTAATGGTGGTAGCAGTGATGATGATGGTGGCAGTGATGGTGATGATGCTGGCAGTGGTGTGATGGTGGTGGTGGTAATGGTGGTGATAGTGGTGGTGATGATAATAGTGCTGGTGGCAGTAATGATGGTGGTAGTGATGATGATAATGATGACAGTGGTGGTGGTTGTGATAATGATGTTGGTGATGGTGATGGTGATGGTGATGGTGGTGGTGGTCATGGTGGTGGTGATGCTAGTGCTGGTGGTAGTAATGATGACAGTGGTGGTTATGATGATGATGGTGATGGTGGTGGTGGAGGTGATGGTGATGATGGTGGTTGTGGTGGTAGTGGTGGTGATAGTAGATGATGATGCCGATAGTGGTGATGGTGATGGTTGTGGTGGTGGTGGTGATGGTGGTTGTGTTGATGGTGGTTGTGATGGTGATGATGATGGTGGTGGCAGTCATGGTGATGGTGGTGGTGATGGTCATGGTGTTGGTGGTGATGGTGGTGGTGTTGGTGTTGGTGGTGGTGATGGTGGTGGTGGTGCTGGTGGTGGTGGTGGTGTTGGTGCTGGTGGTGCTGGTGGTGGTGGTGGTGGTGGTGATGGTCATGGTGGTGATGATGGTGGTGATGGTCATGGTGGTGGTGGTGGTGATGGTCATGGTGATGGTGGTGTTGGTGATGGTGGTGGTGGTGATGGTGGTGGTGGTCATGGTGGTCATGGTGGTGATGGTCATTGTGGTGGTGGTGATGATGGTCATGGTGGTGGTTGTGATGGTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12156:HG2_PB_HySA_17956:HG3_PB_pbsv_9702:HG2_PB_pbsv_9971:HG4_PB_SVrefine2PBcRDovetail_4989:HG4_PB_pbsv_9994:HG4_PB_SVrefine2Falcon1Dovetail_6136:HG3_PB_SVrefine2PBcRDovetail_4563:HG3_PB_SVrefine2Falcon1Dovetail_6102:HG2_PB_SVrefine2PBcRplusDovetail_11363:HG2_PB_SVrefine2PB10Xhap12_7260:HG2_PB_SVrefine2Falcon2Bionano_4694;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4694:HG2_PB_SVrefine2PB10Xhap12_7260:HG2_PB_SVrefine2PBcRplusDovetail_11363;NumExactMatchSVs=3;ClusterMaxShiftDist=0.125702;ClusterMaxSizeDiff=0.125702;ClusterMaxEditDist=0.30115;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=1794;DistBack=8723;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=715;REFWIDENED=8:144492487-144493201;PctSeqSimilarity=0.9698;PctSizeSimilarity=0.9933;PctRecOverlap=0.6825;SizeDiff=12;StartDistance=-564;EndDistance=-564;GTMatch=1;TruScore=88;MatchId=5539.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:1:21:1:28:./.:0:0:0:0:./.:0:0:1/1:1:331:.:1918:.
chr8	145510255	HG3_Ill_GATKHC_16110	T	TAAAGCACAGGACACGCGGGCAGGTGCATGGGCGCCACGGCAGGGCAGGGCCTCGGCCC	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5000:HG4_Ill_GATKHCSBGrefine_6926:HG3_Ill_GATKHC_16110:HG3_Ill_GATKHCSBGrefine_6696:HG2_Ill_GATKHC_16166:HG2_Ill_GATKHCSBGrefine_6793:HG2_PB_PB10Xdip_29722:HG2_PB_assemblyticsPBcR_26584:HG4_PB_assemblyticsfalcon_26751:HG3_PB_pbsv_9723:HG2_PB_pbsv_9995;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6793:HG2_Ill_GATKHC_16166:HG3_Ill_GATKHCSBGrefine_6696:HG3_Ill_GATKHC_16110:HG4_Ill_GATKHCSBGrefine_6926;NumExactMatchSVs=5;ClusterMaxShiftDist=0.128;ClusterMaxSizeDiff=0.126984;ClusterMaxEditDist=0.269841;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=58;DistBack=1;DistForward=1889;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=324;REFWIDENED=8:145510057-145510380;PctSeqSimilarity=0.9771;PctSizeSimilarity=0.8923;PctRecOverlap=0;SizeDiff=-7;StartDistance=134;EndDistance=134;GTMatch=0;TruScore=62;MatchId=5547.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:43:1/1:3:18:1:12:./.:0:0:0:0:0/0:45:0:./.:.:.:.:.:.
chr8	145781904	HG2_PB_SVrefine2Falcon2Bionano_4714	G	GCCTTCATAGTATTCAGCGGCAAAAGCCTGAACCTTCATAGTATTCAGAGGCAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAGCCTGAACCTTCATAGTATTCAGAGGCAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAAGGCTGAACCTTCATAGTATTCAGTGGCAAAAGCCTGAACCTTCATAGTATTCAGAGGCAAAGGCTGAACCTTCATAGTATTCAGTGGCAAAGGCTGAACCTTCATAGTATTCAGCGGCAAAAGCCTGAACCTTCATAGTACTCAGAGGCAAAGGCTGAACCTTCATAGTATTCAGAGGCAAAGGCTGAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12179:HG4_PB_HySA_14505:HG2_PB_HySA_18003:HG2_PB_pbsv_10004:HG3_PB_SVrefine2Falcon1Dovetail_6126:HG2_PB_SVrefine2PBcRplusDovetail_11385:HG2_PB_SVrefine2Falcon2Bionano_4714:HG3_PB_HySA_14966;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4714:HG2_PB_SVrefine2PBcRplusDovetail_11385;NumExactMatchSVs=2;ClusterMaxShiftDist=0.136818;ClusterMaxSizeDiff=0.136818;ClusterMaxEditDist=0.222222;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=610;DistBack=24419;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1280;REFWIDENED=8:145781905-145783184;PctSeqSimilarity=0.9821;PctSizeSimilarity=0.9902;PctRecOverlap=0;SizeDiff=6;StartDistance=-847;EndDistance=-847;GTMatch=0;TruScore=65;MatchId=5552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:67:1/1:3:23:3:15:./.:0:0:0:0:./.:0:0:0/1:4:14:.:667:.
chr8	145987823	HG2_Ill_SVrefine2DISCOVARplusDovetail_13328	C	CCCACTTCACATCCTGCACTGAGACGCACACAAACCCTGGTGCGGCCTCCAGCCCTCAGGCTGACCCGGAGTGA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13328:HG4_PB_pbsv_10035:HG3_PB_HySA_14972:HG2_PB_HySA_18015:HG3_Ill_GATKHC_16124:HG2_PB_PB10Xdip_29740:HG3_PB_pbsv_9741:HG3_Ill_GATKHCSBGrefine_6700:HG3_Ill_250bpfermikitraw_13135:HG4_Ill_GATKHC_16186:HG3_Ill_GATKHC_16123:HG2_Ill_GATKHC_16174:HG3_PB_assemblyticsfalcon_27260:HG3_PB_SVrefine2PBcRDovetail_4593:HG3_Ill_SVrefine2DISCOVARDovetail_7440:HG2_PB_SVrefine2PBcRplusDovetail_11393:HG2_PB_SVrefine2PB10Xhap12_7292;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13328:HG3_PB_SVrefine2PBcRDovetail_4593:HG3_Ill_SVrefine2DISCOVARDovetail_7440:HG2_PB_SVrefine2PBcRplusDovetail_11393:HG2_PB_SVrefine2PB10Xhap12_7292;NumExactMatchSVs=5;ClusterMaxShiftDist=0.17931;ClusterMaxSizeDiff=0.17931;ClusterMaxEditDist=0.358621;PBcalls=9;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=9;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=73;DistBack=18428;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=223;REFWIDENED=8:145987824-145988046;PctSeqSimilarity=0.9867;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-114;EndDistance=-114;GTMatch=0;TruScore=66;MatchId=5554.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:./.:11:6:10:18:./.:0:0:0:0:0/0:36:1:./.:.:.:.:.:.
chr9	20972742	HG2_PB_SVrefine2PB10Xhap12_7404	A	AGCTTCTCCTTTTTGCAGCTATTTTCCTTCTGTTGACTCTGCCCTATTTCTTCTTCCACCTTTTCAGTGTGCTGATTTTACCTCCGCTTCTCCTTGTTCCCATGCTTCTCCTTTCTGCAGCTATTTTACCTTATGCTGACTTTGCTTTATTCTGGTTCCCTCTTCTTTCAGCATCTGCTGATGTGGCCACTGCTCCTTGTTCCTGTGCTTCTCCTTTCTGCAGCTGATTTACTTCTGCTGACTTTGCCCTGTTCTGGTTCCCTCTTCTTTCAGCATCTGCTGATGTGGCCTCTGCTTCTCCTTGTTCCTGTGCTTCTTCTTTCTGCAGCTATTTTACCTTCTGCTGACTTTGCCTTGTTCTGATTCCCTCTTTCAGTATCATCTGATGTGGCCTCTGCTTCTCCTTGTTCCTGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12270:HG4_PB_SVrefine2Falcon1Dovetail_6222:HG3_PB_SVrefine2PBcRDovetail_4662:HG2_PB_SVrefine2PBcRplusDovetail_11476:HG2_PB_SVrefine2PB10Xhap12_7404:HG2_PB_SVrefine2Falcon2Bionano_4794;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12270:HG4_PB_SVrefine2Falcon1Dovetail_6222:HG3_PB_SVrefine2PBcRDovetail_4662:HG2_PB_SVrefine2PBcRplusDovetail_11476:HG2_PB_SVrefine2PB10Xhap12_7404:HG2_PB_SVrefine2Falcon2Bionano_4794;NumExactMatchSVs=6;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=413;DistBack=15274;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=983;REFWIDENED=9:20972743-20973725;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=5593.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:31:./.:3:16:6:8:./.:0:0:0:0:0/1:1:8:0/1:3:12:.:.:.
chr9	32693947	HG3_PB_SVrefine2PBcRDovetail_4694	C	CCGTCTGGGAGGTGAGGAGCGCCTCTGCCCGGCCGCCACCCTGTCTGGGAAGTGAGGAGCGCCTCTGCCCGGCCGCCCAT	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4824:HG3_PB_SVrefine2PBcRDovetail_4694:HG3_Ill_SVrefine2DISCOVARDovetail_7604;NumClusterSVs=3;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4824:HG3_PB_SVrefine2PBcRDovetail_4694:HG3_Ill_SVrefine2DISCOVARDovetail_7604;NumExactMatchSVs=3;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=79;DistBack=36784;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=305;REFWIDENED=9:32693948-32694252;PctSeqSimilarity=0.9825;PctSizeSimilarity=0.962;PctRecOverlap=0;SizeDiff=3;StartDistance=-235;EndDistance=-235;GTMatch=0;TruScore=64;MatchId=5617.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:0|1:20:4:5:20:./.:0:0:0:0:0/0:14:0:./.:.:.:.:.:.
chr9	73023900	HG3_PB_SVrefine2PBcRDovetail_4744	C	CTATATATATATATGTGTATATATATATACATATATGTATATATATATATGTGTATATATATATACATATATGTGTATATATATGTGTGTATATATATATACA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4744:HG3_Ill_manta_2405:HG2_PB_pbsv_10261;NumClusterSVs=3;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_4744;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0582524;ClusterMaxSizeDiff=0.039604;ClusterMaxEditDist=0.277228;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=102;DistBack=86322;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=248;REFWIDENED=9:73023901-73024148;PctSeqSimilarity=0.925;PctSizeSimilarity=0.9444;PctRecOverlap=0;SizeDiff=-6;StartDistance=-214;EndDistance=-214;GTMatch=0;TruScore=62;MatchId=5636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:22:0|1:17:2:3:19:./.:0:0:0:0:0/1:29:12:./.:.:.:.:.:.
chr9	80929137	HG2_PB_SVrefine2Falcon2Bionano_4881	G	GTCCTGTGTTAAGTAGAGTCACAGGGGCTAGACATCAGTGCTCTGCAGAGGGCTGGGTGGGAGGGGAGGCAGGACCTCCTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4881:HG2_PB_PB10Xdip_31684:HG3_PB_HySA_15626:HG2_PB_assemblyticsfalcon_27775:HG3_PB_pbsv_10067:HG2_PB_HySA_18732:HG4_PB_HySA_15151:HG4_PB_pbsv_10345:HG4_PB_SVrefine2PBcRDovetail_5179;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4881:HG4_PB_SVrefine2PBcRDovetail_5179;NumExactMatchSVs=2;ClusterMaxShiftDist=0.141935;ClusterMaxSizeDiff=0.141935;ClusterMaxEditDist=0.35443;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=80;DistBack=29957;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=322;REFWIDENED=9:80929138-80929459;PctSeqSimilarity=0.9916;PctSizeSimilarity=0.9875;PctRecOverlap=0;SizeDiff=1;StartDistance=-158;EndDistance=-158;GTMatch=0;TruScore=65;MatchId=5660.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:42:1/1:3:22:3:15:./.:0:0:0:0:0/1:13:3:./.:.:.:.:.:.
chr9	90221623	HG2_PB_pbsv_10368	T	TTCCTCCCTCCCTCCCTCTCTCTCTCCCTCCTTTTCTCCCTCCTCATCCTCCTTCTTTCCTTCCCCTCTCGTCTCCCTTGTCCTCCCTCTCTCCTTCCTTCCTTCC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_31748:HG2_PB_HySA_18839:HG2_PB_pbsv_10368:HG2_PB_SVrefine2PB10Xhap12_7587;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_10368;NumExactMatchSVs=1;ClusterMaxShiftDist=0.127451;ClusterMaxSizeDiff=0.115385;ClusterMaxEditDist=0.22549;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=105;DistBack=10;DistForward=46;DistMin=10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=401;REFWIDENED=9:90221356-90221756;PctSeqSimilarity=0.9765;PctSizeSimilarity=0.9545;PctRecOverlap=0;SizeDiff=-5;StartDistance=126;EndDistance=126;GTMatch=0;TruScore=64;MatchId=5676.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:21:0|1:19:0:3:20:./.:0:0:0:0:0/0:12:0:./.:.:.:.:.:.
chr9	107058067	HG2_PB_SVrefine2Falcon1plusDovetail_12494	T	TCAACAAATTGGTTAAACTTAGATTGTGACATATTTAGAACTTTACACCAACACTCACCAACAGAACTTTCTGTGATGATGGAAATATTTTATATTTGTGTATTGTAGTATTATATTGCTTTGTAGCCACTAGCAACATGTGACTATCAGGCACTTGAAATGTGGCTACTGCAATCAGAGAACTGAAATATTAATTTTATTTCATTTTAATTTGTTTAAGTAGACACATGTGGCAAAGTGCTAGTATACTGGAAAACACAGCTTAATTTTCTACAAATTCTTTACATAAATAAAATATTTTATTCTAAAAATATTTTTAAACCCCATAAGTTTGTTGATTACCAATTTTGATAACCTAAAAATAATTATAGTATCTGTACTTAGAATTCTACTCTATTTACCAGCCTGAATTTTGAAATATCTTTGATAAAATTTTTTTAAATCATGAGAATAACTTTGATTTTGACATATCTACATACATATTATAAAATAGATGAATACTGGCCGGACACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGTTTGAGGCAGGCGGATCACCTGAGATTAGGAGTTCAAGACCATCCTTGTCAACATGGTAAGACCTCCTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGATGGCAGGTACCTGCAATCCCAGCTA	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6424:HG4_PB_pbsv_10491:HG2_PB_pbsv_10463:HG2_PB_PB10Xdip_30706:HG2_PB_HySA_19023:HG4_PB_SVrefine2PBcRDovetail_5266:HG4_PB_HySA_15363:HG2_PB_SVrefine2PB10Xhap12_7664:HG2_PB_SVrefine2Falcon2Bionano_4968:HG2_PB_SVrefine2Falcon1plusDovetail_12494:HG2_10X_SVrefine210Xhap12_7462;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7462:HG2_PB_SVrefine2Falcon1plusDovetail_12494:HG2_PB_SVrefine2Falcon2Bionano_4968;NumExactMatchSVs=3;ClusterMaxShiftDist=0.112377;ClusterMaxSizeDiff=0.107657;ClusterMaxEditDist=0.188307;PBcalls=10;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=673;DistBack=-673;DistForward=0;DistMin=-673;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=674;REFWIDENED=9:107058068-107058741;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9985;PctRecOverlap=0.2467;SizeDiff=1;StartDistance=-507;EndDistance=-507;GTMatch=1;TruScore=74;MatchId=5702.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:34:66:./.:17:4:3:7:./.:0:0:0:0:1/1:0:25:0/1:9:14:.:.:.
chr9	135394538	HG2_PB_SVrefine2PB10Xhap12_7770	G	GATGGGTGGATGGATAGGTGGGTGGGTGGGTGAATGAATGGATGGATGGATGGGTGGGTGGGTAGGTGAGTGGGTGGATGGTTGGGTGGATGGATGGATAGGTGGATGGATGAGTGAGTGGGTGGGTGGATGGATGGGTGGATGGATGAATGGATGGATGGGTGGGTGAATGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6437:HG4_PB_SVrefine2Falcon1Dovetail_6528:HG4_PB_SVrefine2PBcRDovetail_5363:HG2_PB_SVrefine2PBcRplusDovetail_11792:HG2_PB_SVrefine2PB10Xhap12_7770:HG2_PB_SVrefine2Falcon2Bionano_5069;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5069:HG2_PB_SVrefine2PB10Xhap12_7770:HG2_PB_SVrefine2PBcRplusDovetail_11792:HG4_PB_SVrefine2PBcRDovetail_5363;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0462428;ClusterMaxSizeDiff=0.0462428;ClusterMaxEditDist=0.0462428;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=172;DistBack=-802;DistForward=-1;DistMin=-802;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=247;REFWIDENED=9:135394539-135394785;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=5762.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:./.:2:39:2:4:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr9	137368249	HG2_PB_SVrefine2Falcon2Bionano_5102	A	GCCCCAGTTCCTCACTCTAGGCCCCAGTTCCTCACTCTAGGCCCCAGTTCCTCACTCTAGGCCCCAGTTCCTCACTCTAGGCCCCAGTTCCTCACTCTAGGTCCCAGTTCCTCACTCTAGGCCCCAGTTCCTCACTCTAGGCCCCAGTTCCTCACTCTAGG	10	PASS	ClusterIDs=HG2_PB_HySA_19406:HG2_PB_SVrefine2Falcon1plusDovetail_12632:HG2_PB_assemblyticsPBcR_27557:HG2_PB_SVrefine2PBcRplusDovetail_11824:HG2_PB_SVrefine2PB10Xhap12_7805:HG2_PB_SVrefine2Falcon2Bionano_5102:HG4_PB_SVrefine2Falcon1Dovetail_6558:HG3_PB_SVrefine2Falcon1Dovetail_6468:HG4_PB_pbsv_10721;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5102:HG2_PB_SVrefine2PB10Xhap12_7805:HG2_PB_SVrefine2PBcRplusDovetail_11824:HG2_PB_assemblyticsPBcR_27557;NumExactMatchSVs=4;ClusterMaxShiftDist=0.117994;ClusterMaxSizeDiff=0.116959;ClusterMaxEditDist=0.284024;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=160;DistBack=-1;DistForward=4341;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=561;REFWIDENED=9:137367817-137368377;PctSeqSimilarity=0.9711;PctSizeSimilarity=0.9938;PctRecOverlap=0;SizeDiff=1;StartDistance=186;EndDistance=186;GTMatch=0;TruScore=65;MatchId=5778.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:71:1/1:2:49:1:13:./.:0:0:0:0:./.:2:3:./.:.:.:.:.:.
chr9	137576717	HG2_PB_SVrefine2PBcRplusDovetail_11831	G	GATCCATCCACTCATCCATCCATCCACCATCTATCCATTCACCCATCCATCCATTCATCCATCCATCCACCATCCATTCATCCATCCATCCACCATCCATCCATTAATTCATCCATCCATCCACCATCCATCCATTAATTGATCCATCCATCCATCCATCCATTCATCCATCCACCATCCATCCACCATCCATCCATCCATCCATCCATCCACCCACCATCCATCCATCCACCATCCATCCATTCATCCATCCATCCATCCATCCATCATCCTCCCATTCATCCATCCATCCACCATCCATCCATTCATTCATCCTTCCATCTGTCCATCCATCCATCCATCCACCATCCATTCACCCATCCATCCATTCATCCATCCATCCACCATCCATCCATTAAGTCATCCATCCATCCATCCATCCACCATCCATCCATCCACCATCCATCCATTCATCCATCCATCTGTCCATCCATCCATCCATCCGTCCATCCACCATCCATTCACCCATCCATTCATCCATCCATCCACCATCCATCCATTAATTCATCCATCCATCCATCCATCCATCCATTCATCCATCCACCATCCATCCATCCATCCATCCACCATCCATCCATCCATCCACCATCCATCCATCCACCATCCATCCATTCATCCATCCATCCATTCATCCATCCATCATCCTCCCATTCATCCATCCATCCACCATCCATCCATTCATTCATCCATCCATCCATCCGTCCATCCATCCATCCATGCATCCGTCATCCATCCACCATCCATCCATTCATTCATCCATCCATCTGTCCATCCATCCATCCATCCATCCATCCACCATCCATTCACCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5107:HG2_PB_pbsv_10685:HG3_PB_SVrefine2PBcRDovetail_4996:HG4_PB_SVrefine2PBcRDovetail_5393:HG4_PB_SVrefine2Falcon1Dovetail_6566:HG3_PB_SVrefine2Falcon1Dovetail_6475:HG2_PB_SVrefine2PBcRplusDovetail_11831:HG2_PB_SVrefine2PB10Xhap12_7812:HG2_PB_SVrefine2Falcon1plusDovetail_12638:HG4_PB_pbsv_10729;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7812:HG2_PB_SVrefine2PBcRplusDovetail_11831:HG3_PB_SVrefine2Falcon1Dovetail_6475;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0960187;ClusterMaxSizeDiff=0.0960187;ClusterMaxEditDist=0.223176;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=847;DistBack=5312;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1207;REFWIDENED=9:137576719-137577925;PctSeqSimilarity=0.9672;PctSizeSimilarity=0.9792;PctRecOverlap=0.3434;SizeDiff=-18;StartDistance=-559;EndDistance=-559;GTMatch=0;TruScore=76;MatchId=5782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:1:4:2:12:./.:0:0:0:0:./.:0:0:0/1:8:57:.:2084:.
chr9	138649898	HG4_Ill_SVrefine2DISCOVARDovetail_7770	A	AGGCTGCCCCGTGGGCCTCAGCGGAGACGCAGGTGTGGCCAGGCGTGGGCTGCCCCTTGGGCCTCAGCCGAGACACAGGTGTGGCCGTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12658:HG4_PB_assemblyticsfalcon_27784:HG4_PB_HySA_15711:HG4_PB_SVrefine2Falcon1Dovetail_6588:HG4_Ill_250bpfermikitraw_14365:HG2_PB_PB10Xdip_30981:HG2_PB_HySA_19485:HG3_PB_pbsv_10467:HG2_PB_pbsv_10726:HG2_PB_SVrefine2Falcon2Bionano_5127:HG2_Ill_SVrefine2DISCOVARplusDovetail_13888:HG4_Ill_SVrefine2DISCOVARDovetail_7770:HG2_PB_SVrefine2PBcRplusDovetail_11851:HG2_PB_SVrefine2PB10Xhap12_7838;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12658:HG4_Ill_SVrefine2DISCOVARDovetail_7770:HG2_PB_SVrefine2PBcRplusDovetail_11851:HG2_PB_SVrefine2PB10Xhap12_7838;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0546448;ClusterMaxEditDist=0.273224;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=88;DistBack=-87;DistForward=138;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=264;REFWIDENED=9:138649899-138650162;PctSeqSimilarity=0.9745;PctSizeSimilarity=0.9565;PctRecOverlap=0;SizeDiff=-4;StartDistance=-223;EndDistance=-223;GTMatch=0;TruScore=64;MatchId=5793.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:54:1/1:5:23:2:25:./.:0:0:0:0:0/1:15:5:./.:.:.:.:.:.
chr9	139792425	HG2_PB_SVrefine2Falcon1plusDovetail_12682	T	CCGTGGTAGCTATAGGGAGTGCACTAGCCAGCCTCAGGTGTGCTACGTTCCCGCTCTCGGGCTGGAGGGGAACCCGTGGTAGCTAAAGGGAGTGCACTAGCCAGCCTCAGGTGTGCTACGTTCCCGCTCTCGGGGCTGGAGGGGAAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6529:HG2_PB_assemblyticsfalcon_28402:HG2_PB_SVrefine2Falcon1plusDovetail_12682:HG4_PB_SVrefine2Falcon1Dovetail_6613:HG3_PB_pbsv_10506:HG4_PB_HySA_15771:HG2_PB_pbsv_10765:HG4_PB_SVrefine2PBcRDovetail_5427:HG3_PB_HySA_16279;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12682:HG2_PB_assemblyticsfalcon_28402;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0733333;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.264026;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=146;DistBack=-1;DistForward=6806;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=739;REFWIDENED=9:139791901-139792639;PctSeqSimilarity=0.9844;PctSizeSimilarity=0.9932;PctRecOverlap=0;SizeDiff=-1;StartDistance=172;EndDistance=172;GTMatch=0;TruScore=65;MatchId=5801.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:21:0|1:22:5:4:24:./.:0:0:0:0:0/0:10:0:./.:.:.:.:.:.
chr9	140244442	HG2_PB_SVrefine2PBcRplusDovetail_11886	C	CAGAGAGGGGTGGGGATCACGGGGAAGGTGCTAGATAGAGAGGGGTGGGGATCACGGGGAAGGTTCTAGATAGAGAGGGGTGGGGATCACGAGGAGGGGCTAGATAGAGAGGGGTGGGGATCACGGGGAGGGTTCTAGATAGAGAGGGGTGGGGATCACGGGGAAGGTTCTAGATAGAGAGGGATGGGGATCACGGGGAAGGTTCTAGATAGAGAGGGGTGGGGATCACGGGGAAGGTTCTAGATAGAGAGGGATGGGGATCACGGGGAAGGTGCTAGATAGAGAGGGGTGGGGATTACGGGGAGAGAGCTAGAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5162:HG3_PB_HySA_16299:HG3_PB_pbsv_10521:HG4_PB_pbsv_10825:HG4_PB_pbsv_10824:HG4_PB_SVrefine2PBcRDovetail_5433:HG3_PB_SVrefine2PBcRDovetail_5042:HG2_PB_SVrefine2PBcRplusDovetail_11886:HG2_PB_SVrefine2Falcon1plusDovetail_12696:HG3_PB_SVrefine2Falcon1Dovetail_6539;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12696:HG2_PB_SVrefine2PBcRplusDovetail_11886:HG3_PB_SVrefine2PBcRDovetail_5042:HG4_PB_SVrefine2PBcRDovetail_5433;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0977099;ClusterMaxSizeDiff=0.0946565;ClusterMaxEditDist=0.30625;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=314;DistBack=1227;DistForward=495;DistMin=495;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=737;REFWIDENED=9:140244443-140245179;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.9968;PctRecOverlap=0;SizeDiff=1;StartDistance=-588;EndDistance=-588;GTMatch=0;TruScore=65;MatchId=5807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:1:8:1:25:./.:0:0:0:0:./.:0:0:./.:0:4:.:12107:.
chr10	701682	HG2_PB_SVrefine2PBcRplusDovetail_971	A	ACTACTTGTCCTATTGTATACTATACTATATAATGTTACACTGTTTCTTCTATTCTATGCTACCCTATAGAACACTCTACTATTTGTCCCATTGTATACTATACTATATAATGTTACAGTTTCTTCTATTCTATGTTACCCTATAGAACACTCTACTATTTGTCCTATTGTATACTATACTATATGTTACACTATTTCTTCTGTTCTACGCTACCCTATATAACGCTATACTATTTGTCCTATTGTACACTATACTATATAATGTTACACTGTTTCTTCTATGCTACCCTATAGAACACTCTATTTGTCCTATTGTATACTATATATATAATGTTACACTGTTTCATCTATTCTATGCTACCCTATAGAACACT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1008:HG2_PB_HySA_19653:HG4_PB_pbsv_10875:HG3_PB_HySA_16363:HG3_PB_pbsv_10583:HG2_PB_HySA_19652:HG2_PB_PB10Xdip_4575:HG2_PB_PB10Xdip_4574:HG2_PB_pbsv_10842:HG4_PB_SVrefine2Falcon1Dovetail_6664:HG4_PB_SVrefine2PBcRDovetail_5461:HG3_PB_SVrefine2PBcRDovetail_5069:HG3_PB_SVrefine2Falcon1Dovetail_6585:HG2_PB_SVrefine2PBcRplusDovetail_971:HG2_PB_SVrefine2PB10Xhap12_7924:HG2_PB_SVrefine2Falcon2Bionano_5189;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1008:HG4_PB_SVrefine2PBcRDovetail_5461:HG3_PB_SVrefine2PBcRDovetail_5069:HG3_PB_SVrefine2Falcon1Dovetail_6585:HG2_PB_SVrefine2PBcRplusDovetail_971:HG2_PB_SVrefine2PB10Xhap12_7924:HG2_PB_SVrefine2Falcon2Bionano_5189;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0753247;ClusterMaxSizeDiff=0.0623377;ClusterMaxEditDist=0.290909;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=373;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=596;REFWIDENED=10:701683-702278;PctSeqSimilarity=0.9678;PctSizeSimilarity=0.9739;PctRecOverlap=0;SizeDiff=-10;StartDistance=-429;EndDistance=-429;GTMatch=0;TruScore=64;MatchId=466.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:2:16:1:12:./.:0:5:0:4:./.:4:1:./.:1:4:.:.:.
chr10	1205552	HG2_PB_SVrefine2Falcon2Bionano_5204	A	ACACTGGCCTGCGCGCCCTATGCTTTATGCAGATGAGGGATGGCGCAAGCACAGGCCTGCGCGCAGGGCTTTAGGCAGATGAGGGATGACGCAGGCACAGGCCTGAGCGTCGCACGCTTTGCGTAGATGAGGGATGGCGCCGGCGCAGGCCTGAGCGTCGCACGCTTTGCGTAGATGAGGGATGACGCAGG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1135:HG2_PB_HySA_19693:HG3_PB_SVrefine2Falcon1Dovetail_6597:HG4_PB_SVrefine2PBcRDovetail_5472:HG4_PB_SVrefine2Falcon1Dovetail_6678:HG4_Ill_SVrefine2DISCOVARDovetail_7806:HG2_PB_SVrefine2Falcon2Bionano_5204:HG2_PB_SVrefine2Falcon1plusDovetail_1024;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1135:HG4_PB_SVrefine2PBcRDovetail_5472:HG4_PB_SVrefine2Falcon1Dovetail_6678:HG4_Ill_SVrefine2DISCOVARDovetail_7806:HG2_PB_SVrefine2Falcon2Bionano_5204:HG2_PB_SVrefine2Falcon1plusDovetail_1024;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0700809;ClusterMaxSizeDiff=0.0700809;ClusterMaxEditDist=0.199461;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=190;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=193;REFWIDENED=10:1205553-1205745;PctSeqSimilarity=0.9719;PctSizeSimilarity=0.9896;PctRecOverlap=0;SizeDiff=-2;StartDistance=-217;EndDistance=-217;GTMatch=0;TruScore=65;MatchId=469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:23:1|0:1:20:26:1:./.:1:0:0:4:0/1:12:7:./.:.:.:.:.:.
chr10	1600392	HG2_PB_SVrefine2Falcon2Bionano_5219	G	GCCCCATCTAAATCTTCATCCCACCTCTGCCCCCCTCCATGGGTGCTCAGACCCCGCATGCTCCATCTAAATCCACATCCCACCTCTGTCCCCCCTCCGTGGGTGCTCAGCCCCCACGCACCCCATCTAAATCCGCATCCCACCTCTGTCCCATTCTGTGGGTGCTCAGCCCCCGCATGCTCCATCTAAACTCGAATCCCACCTCTGCCCCCCTCCGTGGGTGCTCAGCACCCCCATGCCCCATCTAAATCCACATCCCACCTCTGCCCCCCTCCGTGGGTGCTCAGCCCCCACACACCCCATCTAAATCTGCATCCCACCTCTGTCCCCTTCTGTGGGTGCTCAGCCCCCACGCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7964:HG3_PB_HySA_16428:HG3_PB_pbsv_10634:HG2_PB_HySA_19726:HG4_PB_pbsv_10929:HG2_PB_PB10Xdip_3340:HG2_PB_PB10Xdip_3339:HG4_PB_SVrefine2Falcon1Dovetail_6688:HG3_PB_SVrefine2Falcon1Dovetail_6607:HG2_PB_SVrefine2Falcon1plusDovetail_1042:HG3_PB_SVrefine2PBcRDovetail_5089:HG2_PB_SVrefine2PBcRplusDovetail_1003:HG2_PB_SVrefine2Falcon2Bionano_5219;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5219:HG2_PB_SVrefine2PBcRplusDovetail_1003:HG3_PB_SVrefine2PBcRDovetail_5089;NumExactMatchSVs=3;ClusterMaxShiftDist=0.190104;ClusterMaxSizeDiff=0.171875;ClusterMaxEditDist=0.369792;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=355;DistBack=8;DistForward=352;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=641;REFWIDENED=10:1600393-1601033;PctSeqSimilarity=0.9583;PctSizeSimilarity=0.9972;PctRecOverlap=0;SizeDiff=1;StartDistance=-471;EndDistance=-471;GTMatch=1;TruScore=65;MatchId=476.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:./.:0:0:0:0:./.:0:0:0:0:./.:0:0:./.:1:6:.:.:.
chr10	3356187	HG2_PB_SVrefine2PB10Xhap12_7999	T	TAGGGAAGGGGAGGGTGACTCAGCAGAGTGAGGAAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCACAGAGTGAGGAAAGGGACAGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCAAAGAGTGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGAGGAGGGTGACTTCAAAGAGTGAGGGAAGGGATGGTGACTCACAGAGTGAGGGAAGGGGACAGTGACTTCACAGAGTGAGGAAAGGGACAGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCACAGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCACAGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGGCAGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCAAAGAGTGAGGGAAGAGGAGGGTGACTTCACAGAGTGAGGGAAGGGGACAGTGACTTCACAG	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5505:HG2_PB_SVrefine2PBcRplusDovetail_1029:HG3_PB_pbsv_10687:HG2_PB_SVrefine2PB10Xhap12_7999:HG2_PB_SVrefine2Falcon2Bionano_5245:HG4_PB_SVrefine2Falcon1Dovetail_6722:HG2_PB_SVrefine2Falcon1plusDovetail_1069:HG3_PB_SVrefine2Falcon1Dovetail_6640;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7999:HG2_PB_SVrefine2PBcRplusDovetail_1029;NumExactMatchSVs=2;ClusterMaxShiftDist=0.053363;ClusterMaxSizeDiff=0.041134;ClusterMaxEditDist=0.219011;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=908;DistBack=30577;DistForward=497;DistMin=497;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1291;REFWIDENED=10:3356188-3357478;PctSeqSimilarity=0.9747;PctSizeSimilarity=0.9978;PctRecOverlap=0.2156;SizeDiff=2;StartDistance=-712;EndDistance=-712;GTMatch=0;TruScore=72;MatchId=486.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:69:1/1:2:14:2:24:./.:0:1:0:0:./.:0:1:0/1:8:23:.:.:.
chr10	7666869	HG2_PB_SVrefine2Falcon1plusDovetail_1103	T	CATATATATATGTGTATATACATGTATATACACATATATATGTATATATATGTATATATGTATGTATATATATGTGTATATATATACATAC	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7412:HG4_PB_SVrefine2PBcRDovetail_5545:HG3_PB_assemblyticsfalcon_2386:HG4_PB_assemblyticsfalcon_2333:HG4_Ill_SVrefine2DISCOVARDovetail_7875:HG3_Ill_SVrefine2DISCOVARDovetail_8078:HG2_PB_SVrefine2Falcon2Bionano_5277:HG3_PB_SVrefine2Falcon1Dovetail_6666:HG2_PB_SVrefine2PBcRplusDovetail_1065:HG2_PB_SVrefine2PB10Xhap12_8042:HG2_PB_SVrefine2Falcon1plusDovetail_1103:HG2_Ill_SVrefine2DISCOVARplusDovetail_1219:HG3_PB_SVrefine2PBcRDovetail_5148:HG3_Ill_GATKHC_17544:HG3_Ill_GATKHCSBGrefine_7321:HG2_PB_pbsv_11011:HG3_PB_HySA_16594:HG2_PB_PB10Xdip_4723:HG2_PB_PB10Xdip_4722:HG2_Ill_manta_3101:HG2_Ill_GATKHC_17613:HG4_PB_pbsv_11042;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1219:HG2_PB_SVrefine2Falcon1plusDovetail_1103:HG2_PB_SVrefine2PB10Xhap12_8042:HG2_PB_SVrefine2PBcRplusDovetail_1065;NumExactMatchSVs=4;ClusterMaxShiftDist=0.183784;ClusterMaxSizeDiff=0.183784;ClusterMaxEditDist=0.336957;PBcalls=14;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=90;DistBack=45;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=117;REFWIDENED=10:7666763-7666879;PctSeqSimilarity=0.9526;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=99;EndDistance=99;GTMatch=0;TruScore=65;MatchId=497.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:0:15:1:25:1/1:1:8:0:14:./.:3:36:./.:.:.:.:.:.
chr10	8405069	HG2_PB_SVrefine2Falcon1plusDovetail_1109	G	CATATATATATCATATATATCATATATATCATATATATCATATATATCATATATATATCATATATATCATATATATCATATATATATCATATATATCATATATATATCATATATATCATATATATATCATATATATCATATATATATCATATATATC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1109:HG3_PB_assemblyticsfalcon_2403:HG3_PB_SVrefine2Falcon1Dovetail_6674:HG2_PB_SVrefine2Falcon2Bionano_5284:HG2_PB_assemblyticsfalcon_2416;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1109:HG2_PB_assemblyticsfalcon_2416;NumExactMatchSVs=2;ClusterMaxShiftDist=0.038961;ClusterMaxSizeDiff=0.038961;ClusterMaxEditDist=0.0849673;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=156;DistBack=137;DistForward=16429;DistMin=137;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=614;REFWIDENED=10:8404508-8405121;PctSeqSimilarity=0.95;PctSizeSimilarity=0.8342;PctRecOverlap=0;SizeDiff=-31;StartDistance=527;EndDistance=527;GTMatch=0;TruScore=59;MatchId=501.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:31:./.:11:32:14:2:./.:1:6:4:6:0/1:5:27:./.:.:.:.:.:.
chr10	20315726	HG2_PB_SVrefine2Falcon1plusDovetail_1173	A	AATATAATATACCTTTATAATATATTCTAATATATAGAATATACTTTTATAATATATTCTAATATATAGAATACACTTTTATAATATATTCTAATATATAGAATACACTTTTATAATATATTCTAATAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5210:HG2_PB_pbsv_11127:HG3_PB_pbsv_10852:HG3_PB_SVrefine2Falcon1Dovetail_6735:HG2_PB_SVrefine2Falcon1plusDovetail_1173;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1173:HG3_PB_SVrefine2Falcon1Dovetail_6735;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0700389;ClusterMaxSizeDiff=0.0544747;ClusterMaxEditDist=0.177606;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=128;DistBack=633;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=328;REFWIDENED=10:20315727-20316054;PctSeqSimilarity=0.9941;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-297;EndDistance=-297;GTMatch=0;TruScore=66;MatchId=532.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:1|0:9:28:21:5:./.:1:0:0:0:0/0:20:0:./.:.:.:.:.:.
chr10	28042240	HG2_Ill_GATKHCSBGrefine_7529	C	CCTTCCTCTCTCTCTTTTCCCTCCCTTCCTTCCTTCCTTTCTCCCTCTCTCTCTTTTCCCTCCCTTCCTTCCTTCCTTT	20	PASS	ClusterIDs=HG2_PB_pbsv_11179:HG2_Ill_GATKHC_17876:HG2_Ill_GATKHCSBGrefine_7529;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7529:HG2_Ill_GATKHC_17876;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.177215;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=78;DistBack=25;DistForward=83;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=38;REFWIDENED=10:28042239-28042279;PctSeqSimilarity=0.9665;PctSizeSimilarity=0.9512;PctRecOverlap=0;SizeDiff=-4;StartDistance=128;EndDistance=128;GTMatch=0;TruScore=63;MatchId=546.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:40:./.:19:14:3:20:./.:10:34:9:21:0/1:1:7:./.:.:.:.:.:.
chr10	45836935	HG3_PB_SVrefine2Falcon1Dovetail_6792	G	GAGCCAAGATGGCTGAATAGGAACAGTTCCAGTCTACAGCTCCCAGCATGAGCGATGCAAAAGACAGGTGATTTCCACATTTCCAACTGAGGTACCGGTTCATCTAACTGGGGAGTGCCAGACAGTGGTTGCAGGACAGTGGGTGTAGCACACCATGCGTGACCCAAAGCAGGGTGAGGGATCACCTCACCTGGGAAGGGCAAGAGGTCAGGGAATTCCCTTTCCTAGTCAAAGAAAGCATTCACAGATGGCACCTGGAAAATTGGGTCACTCCTGCCCTAATATTGTGCTTTTCCAATGGGCTTAAAACAGCACACCAGGAGATTATATCCCACACATAGCTTGGAGGGTTCTACACCCACGGAGCCTCACTCTTTGCTAGCACAGCAGTCTGAGACCAAACTGTAAGGCGGCAGTGAGGCTGGGGGAGGGGTGCCCGCCATTGCCCAGGCTTGAGTAGGTAAACAAAGCAGCCGGGAAGCTTGAACTGGCTGGAGCCCACCACAGCTCAAGGAGGCCTGCATGCCTCTGTACACTCCACCTCCAGGGGCAGGGCACAGACAAACAAAAGACAGCAATAACCACTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAAAGAAGTGGTTCTCCCAGCACACAGCTTGACATCTGAGAATGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGAATAGCCTAACTGGGAGGCACCCCCTAGTAGGGGCGGACTGACACCTCACACGGCTGGGTACTCCTCTCAGACAAAACTTCCAGAGGAATGATCAGGCAGCAGCATTTGCGGTTCACCAATATCCCGTTCTGCAGCCACCTGCTGATACCCAGGCAAACAGGTCTGGAGTGGACCTCCAGTAAACTCCAACAGACCTGCAGCTGAGGGTCCTGAATTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAACCCCATCTGTACGTCACCATCACAAAGACCAAAGGTAGATAAAACCACAAAGATGGGAACAAACAGAGCAGAAAAATGGAAACTCTAAAAATCAGAGTGCCTCTCCTCCTCCAAAGGAACAGCTCCTCACCAGCAACAGAACAAACCTGGATGGAGAATGACTTTGACGAGTTGAGAGAAGAAGGCTTCAGATGTCAAACTACTCTGAGCTAAAGGAGGAAGTCCGAACCCATGGCAAAGCAAGTTAAAAACCTTGAAAAAAAATTAGATGAATGGCTAACTAGAATAACCAATGCAGAGAAGTCCTTAAATGACCTGATGGAGCTGAAAACCATGGCATGAGAACTACATGATGAATGCACAAGCCTCAGTAACTGTGATCAATGGAAGAAAGGTATTGCGATGGAAATCAAATCAATGAAATGAAGCATGAAGAGAAGTTTAGAGAAAAAAAAAAAAAAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACATCTAATTGGTGTACCTGAAAGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCAATCTAGCAAAGGCAGCCAACATTCAAATTCAGGAAATACAGAGAATGCCAAAAGATACTCCTCGAGAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATCAAGGAAAAAATGTTAAGCAGCCAGAGAGAAAGGTCGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCTCATCTCTTGGCAGAAACTCTACAAGCCAGAAGAGAGTGAGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAACCAAACTAAGCTTCATAAATGAAGGAGACATATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGTACCAGCCACCAAAAACATGCCAATTGTAAAGACCATCATGCTAGGAAGAAACTGCATCAACTAATGAGCAAAATAACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACCTAAATGTAAATGGGCTAAATGTTCCAGTTAAAAGACACAGATGGAAATGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTAGGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACACAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCTAAACATACATGCACCCAGTACAGGGGCACCCAGATTATAAAGCAAGTCCTTAGAGTCTACAAAGAGAATTAGACTCCCACACAATAATAATGGAGACTTTAACACCCCACTGTCACATTAGACAGATGAACAGACACAAAGTTAACAAGGATACCAGGAATTGAACTCAGCTCTGCACCAAGTGGCCTAATAGACATCTACAGAACTCTCCACCCAAATCAAAGAATATACATTTTTTTGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAAAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGACTAAGAAACTCACTCAAAACCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAATGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAATGAGAAGAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAACAATGTAGAGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCTAAAATTGACACCCTAACATCATAATTAAAAGAACTAGAGAAGCAAGAGCAAGCACATTCAAAAACTAGCAGAAGCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAATCAATGAATCCAGGAGCTGGTTTTTGAAAAGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAAAAGAAAGAGAGAAGAATCAAATAGACGCAATAAAAAATGACAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTACACAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCCATACATACACCCTCCCAAGACTAAACCAGGATGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGAGGCAACAATTAATAGCTTACCAACCAAAAAAAGTCCAAGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACGAGGAGGAGCTGGTACCATTCCTTCTGAAACTAACATGATTTTATATCTAGAAAACCCCATAGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATAAAAAATCAATGTACAAAATCACAAGCATTCTTATACAGCAATAACAGACAGAGAGCTAAATCATGAGTGAACTCCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTGACAAGGGACGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAAGATACAAAGAAATCGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCATGAAAACGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAACTACTTTAAAGTTCACATGGAACCAAAAAAGAGCCCACATTGCCAAGTCAATCCTAAGCCAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAACGCCGCATATCTACAGCTATCTGATCTTTGACAAACCTGAGAAAAGCAAGCAATGAGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTCATACAAAAATTAATTCAAGATGGATTAAAGACTTATATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAAGCAATGGCAACGAAAGCCAAAATTGACAAATGGGATCTGATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACCAACATCAGAATGAACAGGCAACATACAGAATGGAGAAAAATTTTGCAATCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCATCAAAAAGCGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAAGACATTTATGCAGCCAAAAGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACGATGAGATACCACCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTTGAACTAGAAATACCATTTGACCCAGCCATCCCATTTCTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGATACATGCACACGTATGTTTACTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAGTGTCCAACAATAATAGATTGGATTAAGAAAATGTGGCACTTATACACCATGGAATACCAAGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATTGCAAGGACAAAAAACCAAACACCACATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACACTGGGCACTGTTGTGGGGTGGGGGAGGTGGGAGGGATAGCATTAGGAGATATACCTAATGCTAAATGATGAGTTAATGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACCCTAAAACTTAAAGTATAATAATAAAAAAAAGAAGTGTGGCAGTGGGCTCATGCTCATGGAATTCGTTGGTCTTACCATGTTCCCCATCATCCTGAAGCAGCTGGATTGATAGAACGGTGAATGGCCTTTTGAAGTTACAATTACAATGCCAACTAGGTGACAATACTTGGCAGGGCTGGAGCAAAGTTCTCCAGAAGACGTGTATGTGCTGAATCAGTGTCCAATATATGGTACTGTTTCTCCCATAGCCAGGATTCATGGGTCCAGGAATCAAGGGGTGGAAGTGAAAGTGGCACCACTCACCATCACCCCTAGTGATCCACTAGCAAAATTTTTGCTTCCTGTTTCCACAAACATTACTTTCTGCTGGCCTAGAGGTCTTAGTTTCAAAGGAGGAACACTGCCACCAGGAGACACAACAATGATTTCCTTAAACTGGAAGATAAGATTGCCACTTGGACACTTTGGGCTCCTCCTACCTTTAAGTCAACAGGCTAAGAAGGGAGTTACAGTGTTTCCTGGGTGATTGACCTGGCTATTAAGATGAGATCAGTCTACTACTCCACAACGGAGGTCAGGAAAGCATGCATGGAATACAGGAAATCTATTAGGGTGTCTCTTAGTATTACCATGCACTGTGATTAAAGTCAATGAGAAACTAACACAGCCCAATCCAGGCAGGACTACAAATGACCCAGATCTCTCAGGAATGAAGGTTTGGTTCACTCCACCAGGAAAAAAAACCATGACCTGCTGAAGTGCTTGCTGAAGGCAAAGGGAATATAGAATGGGTAGTAGAAGAAGGTAGTCATCAATATCAGCTATGACTACATGACCAGCTGCAGAAATGAGGACTGTAATTGTAATGAGTATTTCCTCCTTTTGTTAAAAACATGTTTGTGCATGTATACATTTGTACTAAGAATATATCTTCATTTTATTTCCTTTTTCCTTTATCATGTGATATAAGATTTATTGACTTCATATTAACATTTAAGTAGTGTTAACTTTATGTAATAGTATCTGGGGTGGGTATTGGTGCATTTCCAATTGTACAAAGGATAGTTGTAGTATGTTAGGCCTAATTACGACCTTATGATTGTCGTTATTTGTAGATTATGTATGATCTCAGGTGATGTGTATGAGTTCAAATTGACAAGGAGTGGACTTGTGATGGTTAATACTGAGTGTGGAACTTGATTGGATTGAAGGATGCAAAGTATTGATCCTGGATGTGTCTGTGAGGGTGTTGTCAAAGGAGATTAACATTTGAGTCAGTGGACTAGGAAAGGCAGACCCACCCTTAATATGGATGGGCACCATCTAATCAGCTGACAGCATGGTTAGAATATAAAGCAGGCAGGAAAACATGAAAAGATGACATTGGCCTAGGTTCTCAGCCTACATCTTTCTCCAGTTCTGGATGCTTCCTTGCCTCAAACATTAGACTCCAAGTTCTTCAGTTTGGGACTCAGACTGGCTCTCTTTGCTCCTCAGCTTGCAGACAGCCTATTGTGGGACCTTGTGATCATGTGAGTTAATACTTGATAAACTCCCCTTCATATATGTATCTATATGTATTAGTTTCTGTCCCTCTAGAGAACGCTGACTAATATAGCTTCTGACATTGATATAATGAAAATTACAGGAAGTGATGTTTAGATTGAGACCTAAAAGATGAGTCAGAGATAACAGGATAGAGTCGTGACGTTGTGGGCATAGAGAATGCTCTGAATTAGGAGACAGAATGACAACTTGGGGGACTGAAAAATGTGTGGCTAGAACATAGAACATTAAAGAAGTGACATGAAATGATGCTGGATAAAGACAGAAAGATCACTGAGTGTCTGTGAAGAAGTTTAAGGATTTGGAACATTGTACTGAAAGAACGACAGATACTTTGAATTATTTTAAGCAGACAGCACTGTGGTGGTAACTATGAGGTGATATAATGACAATCTCATTCCTAGAAGACTAATCTGGATGCATTTGAAAGAATGGATGGAAGGGCCAGGAATGGAAGCAGAGTGGTCATGTTAAAAATGGTGGAGCCGTAGCAGTAGGGATATAGAGACATGGGTGATTTTAAGCAATATTAGGAAGTGGAATGAACTGGCACTGATGACTGACTGATTACAGTAGGTGAGGTGGGACAGAAATTACTCATATAACTCTGGCTTGAGCAGCTGCATAATTGTTGGTGACTTTATGGAGATGGGGGAATGGAGAAGGACATGGCTTGTAGACAAAGATCATGAATCTTATTTGAACATGTTGAATATGAGGTGCCTGAGAGACATCCAAGTAAAAATGACAAAGATATTATGTAAACACACACACACACAACACCACAGAGAAAAACACACTAATGAATATAAATCCAAAACCTCAATAAAAATTAGCAACTAAAGTGAGTTTTATTATAGGATTGCACATATTCTTTAAAATAAGGAAATCTATTAATAAAATGTATATTAATCATCTAAAGGAAAAGTACATATATTTCAGTAAATTTACAAAGGTTATTTAGTAAATTTAATGTACAGTCCTGATTTAAACACTTACTAAAATGAAAGTATATACATATTTGTTTAATATAAGTAATATATGGCAATGACAACATTACAAAATTATGTAACTTATATTTGATGATATCCGGTTTCTGCCATCACTTTTTCCCTTTTCCACAAGCACATCAAAGCTACAGAAAAGGATGCTCCTTTAACTTATATTCCAAAGCAAAAAGAATGTAGAGAGATAACCCAATCATTGCCAACATGTAAAATGAGTGAGAAATAATCCTTTGTTATTACACATTGAGATCTGATGCTTGTTACTGCTGCATAACAAATGAAAGCTGACCAATACCGAAATTGCTACCTAGAAATGGAATGCTGATTTAACAAAAACAAGAGCAACGACAATAAGCCATTAAAACATAATGGATAGGTTAAAGGGTTAAGCAGTGATGAAGTAGTTACTGGAGACTGGAATGATGACAACACCTGTTACACAGTGGTGAAGCCATAAAATGTCACCTGTGACAATATGGAAGGCAAATAATGTACTCATGACTTTGCTTTCAAGTGAATAATTGGAAAAACAGACTATTAAAAATGTATTTTGATAGTGACCGGATGTATTTTACTAAGTACCGCATGAAGGAAATGAGCTTAGGAAGTAATAACCAGAAGGAATAAAGGGAATCCAGAAATTCCAGGACTTGCAGCATTGAAAGTTGCAACAACTTCTCATCTGGTATGAGCAAAATATGAAATTTGGAAGAGCTCTGAGCAACAGAATCTTGTTAAAACCCAATCTCATGTGAAGTGTCATGTTAAGGGTGGCTGTATTAAGGAGTCACCAAACACATCCTTTAGTTGGACAAAATGGCTCAGAAAAAGAAGCCATGGGGAGACAACCTGATTAACCTCAAGATACTCATAATTAATATAAGTTAGATGGAAGGTGTGTCTCAAAAATTATGCATGTGGCTATAGTATGAGTCTGGCATATCAAATACAAACTAAATTTTTGACAGACTCATACTTCATATCTTTTTTCAGTTTTTGGCCAATAAAAATAAAGCTCCTGTGAACATTTGTGTACATCTTTGCATGGACAAATGTTTTCATTTCTCTTGAGTAAATACTTAGGAGCAGAATGGGTCTAGTTAAGAAACAGGAAAGTTGTCTTATGAAGTGGTTGTCTAATTTTACCTTCACATCAGAAGCATATGAGAGTTCCAGTTGCTTCACATCCTTGTCAACAATTGGTATGTCAGTCTTTTTATTTCAGCCATTCCAAAAAGTCTGCAGTGGTACCTCATTGCAGTTTTAACATGCATTTCCCCAATGACTTATGACCTTGAACATCTTTTCATGTGTTTATTTGTCCTCTGCATACCACTTCTGGTCAAGTGTTCAAGTTTTGTTTTTTTTTTTAATTGATCATTCTTGGGTGTTTCTCACGAAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTATGCAGAGGACCCTGCGGTCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGTTGATCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCATAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAGTGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACAGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCCCTTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTACACCTCCCAGACGGGGTGTGACCGGGCAGAGGGCTCCTCACTTCCCAGTAGGGGTGAATGGGCAAAGGTGCCCTCACCTACCGGACGGGGCGGCTGGCCGGGTGGGGGCTGACCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGTGGGGACTGACCCCCCACCTCCCTCCAGATGGGGCGGCTGGCCTGGCGGGGCTGACCCCTCACCTCCCCCCGGACGGGGTGGCTGCCGGGCAGAGACGTTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGGGTCTCCTCACTTCTCAGATGGTGCGGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGATGGGGCGGTTGCCGGGCAGAGGGTCTCCTCACTTCTCAGATGGGGTGGCCGGGCAGAGACGCTCCTCACCTCCCAGGCAGGGTCGCGGCCAGGCAGAGTGCTCCTCACATCCCAGTTTGGGCGGCGGGTCAGAGGCGCTCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACACTCCTCACTTCCTAGATGGGATGGCAGATGGGAAGAGGCGCTCCTCACTTCCTAGTGGGATGGCCGCCGGGCAGAGATGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGATGCTCCTCACTTCCCAGACGGGTGGCGCTGGGCAGAGGCTGCAATCTCGGCACTTTGGGGGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCGAGCCCAGATCACACCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTTAATGAGACTCCGTCTGCAATCCCGGCACCTCGGAGCCGAGGCTGGCGATCACTTGCAGTTAGGAGCTGGAGACCAGCCCAGCCAACACAGCGAAACCTCGTCTCCACCAAAAAAATACGAAAACCAGTCAGGCTTGGCGTGCACGCCTGCAATCGTAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGCACAGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCGTGGAAAGAGAGGAGAGGATACCGTGGAAAGAGAGGAGAGGGAGACCATGGGGAGAGGGAGAGGGAGAGGGAGAGCAAGTGTTCAAGTTTTGTCCTATTTAAAAATCAGGTTGCTTGTTTATTAATTTGTTAATTAATTATATATTCTGTATACAAGTCTTTTTTATTTTTTTTGAGACAGGGTCTCACTTTGTCACCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAGCCTCAACCTCCCAGGGTTCAAGCCATCATCCCATCTCAGCCCCCCAGGTAGATGGGTTACAGGCATGCACCATCTTTTGTATTTTTTGTAGAGACAATTTTCGCCATGTTGCCCAGGCTGGCCTCAAACTCCTGAGCTCAAGCTCAAGCCACCCACCTCGGCTTCCCACAGTGCTGGGATTACAGGCAGGAGCCATCGCACCTCGCCAACGTCTGTTTTTGATATGATTTGCAAATATATTCTTCCAGTCTGGGGCTTGTGTTTCACTGTCTTAACAATTTCTCAATGTCTGTGAAAAACAGACATTTTCCATTTGATAAAATCCAATATTTATTCTTTTTCTTTATGGATTGTACTTTTAATTTCATATATAAAAAGTCTTTTTCTAACCTTTGGGTTCACCAAAGTTTTCTTCTATTTTTTGTTTTCACAAGAAGAGACTGTGTAGCTCTGTTTATTACAGATCTGGCATGGCTCATCAGTGAGAAAAAGAATGTATTACTCATATTGCGTTGAGGCAGTTGGCATCAATCTGTATGGAAATGAACCCCTTCAGTTCCCTACTTCATACCATATATATAAATTCCAATTTTAAATTTTAAAACAATGAAAAATTATAACTTTTATAACATAATGTAGGAGAATATCTTTATGTCCCTGGGGTAGAGGAAGTCATCTTAAGACCAAAAGAAGTCAAAACCAGAGAGGAAAAGACTGATAAATCTGACTACATTAAAATTGAGAAAATATCCTTATCAAAAAATGAAGTGTCAGAGAGTAAAAATATAAAGCCTCAAACAATAAGAAGCTCTTAAAACACATATTGCCAACAAAATATTCATATCCAGAATGTATCTGATAATCCTGAAAATTAGTTTTTTTAAAAAGACAGTAGAAAGACAGGCATAAGAGTTGAAAGAGGAAATCTAAACCATTAAATGTATGAAGTTTCTCAATTACGTCACTAATTATCAAAACATAAATTAATGCCAAACTGTGATGCCATTTTACACCCACCAGATTTGGGTAGAGGACATTAAATCTGACAATCTGATAATCTGATATTGTTGAAAATGTGGAGAAATCAGACTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTTTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACCGCAGCCTCTGCCTCCTGGTTCACACCATTCTCCTGCCTCAGCCCCCCGAGTAGCTGGGACTACAGGCACCCACCACCACATCTGGCTAATTTGTATTTTTTTTAGTAGAGACGAGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTAACCTCGTGATCTGCCCTCCTCGACCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCCAGCCAAGAAATCAGACTCTTATACGCTGCTGTTGTGAGCATAAATCTATTAGCATTGTCTAATAATGTTAATGATATGCATGCTCTTTGGCCCTGCAATTCACTTCCAGATGTACACCTTCAGAATCTCTTGTACACATCTGCTAAGAGACTTAAACAAGAATATTCACAGCAGTATTGATCAACATAGCAAATAATAAAAATAAACCACAGGGAAGGGATACTATGCTAGTATATATTCATTTGATAGAATATTATGAGACTAAAAATATTATCACCAACTTAGAAAAAGACTGTTTTCTATAGCCGTGTAATAAATAGCCACCAAAACCAGTTTACACCTGTTCAATTGATCAGCGTTTCAGTGAACACCTTAAGTAAGTCTATAATTCAGTGTCAGCCCTGCCCTCGTGGATGCCAGCCAATCAAGGATGGACTTACCAGTAATTACACCTCTGAGTGCCAACCAATCAATAGCAGTCTCACCTATCTGCAGATGACATCACCTGCAACTGCCTCTGAAAGTCCACCAATCACTGAGCTCTATGCTTCCCACAAACCCACAACAGAAGTTCCATCAGCCATCTGTTCTGCTCTGGCGACAGTGTCTAACCAGCATAGCTCTATCTTACAAAAAAAGGAATAAATTCAGCTTTGTTATGTTATAACAGTTATTGAACGGTGGTCTCATCATCACTGGCCAATTGTAGAGCTGATTATACAGAAAAAAAAGTATAGTTTACAAGCCTGAACACGCACAGACATCAGGATTTATGTTAAGGAAGGAAAGTTACAGGAAAAAAACATAGTATGAGTCCATTTAAGAAAAAGTAAAAATCGCGTAAAACTGAATAAAACATTAATCAGGAACCCATATGAGATAACACTACAACGAAAATCAAGGGAATGATTGATACAAAGTTCAATATCATGGTTACTTTAGGAAAGGGAAGGTAATGGACCAGGAGGGGATCAGAGCCTTCAAAGATATTGTTAATGTTGTATTCTTAAGCTGGCTATTGAATACAGTCATTCATTCTTTTGTTATGTTCATGCTGTACACATAGTTTATAAAAATTATATCTATGCAATATTTAATGACATTAAACAAGCATTTCTGAAGAGTTTGCAGTGTGCAGGCTCTGTAACATGTACTCTGCATGCACCTTCTCCTTATAACAAGCCTACGACATAGAAATTATACCCATTTTACAGATGAAGAAAACAAGGCTTGCAGTGGTTAAACAACTTTCCCAAGGACACAGGTTAGAGTGCCTAGGATTTGAACCCGAATGATCTGATGGCAGAGCCCAAAGTCTCACTTAAGTAATCTCTATACACAAGTCAGCAAAAAGCCATGGGTCTTGACAAAGTCTAAGAGCTAGTTTTGTGAGTGCATATGGCTTTAAGGGTCTAACTAATTAAGAGCAATGGGTGAAAGCTTCAGAGGGACATATTCGGGGTCACTATAAGAAAAGGCTTCCAAATACTCAGATCAAATCAGAAAGGGATGGGCCACCTGTGGATGGTAAACTTCCTATCCCAAGCGGTGTTCAATCATGTTCTAGGCAGAACCTTACTGGAGATTTATAGGAGAATAATCTCCCTATAAACATACCAGACAGTGAGATTGAGCTATCCTCACAGTTCCTTCTGTCCTAGGACCTCAAATTTGCACTCACTGTGGTCCTAGGAAGAGTTCTGGACTAGCACTGAGTCTCTAAGCATCTATGTTTTATTTTAGAGCACTGTAAAAACTGGTGATAATTTGCTTTATTTTATTTTCCTTTATTCACCTGTGTCCAGAGTTGCTTTAGCAATTTCCAAATGTGACCAACAAGCTTTTTAAAAAAAATTTTGTATCATTATGAACACATGAGGTTTAATCTATTCCATATGTTTTTCTCATTTTAGTTATTATTCTTTTGATGCCCAAATTGACCCTGTAGGAGCCTCTTACAGTTACAGTTGGCCTATGAGTCTTTGATACTATCCAATAGCCAGACAGCTTCCTCTCTTTCTGATTCCACATGAAGTTCCAGACTCATCTTGAAGATTTCCTGCCCTAAATCTGAAGACAACCATTTCTCAAGGAGCCCTGGGTCCTTTTAATGAGAAATGGTGTCCTTCAGCATTAAGATCTGGATTCAGTGTGATGATTTAATATATGCATACATTGTATACTGATTACCACAATCAAATTAATGAGCACATCCATTACCAACCATAGTTATCACTTGTGTCTGTGTATGTGTGTGTATATGCATATGTGTGTGTGCTAAGGAGACTTGAAATCCTCTCTATCAAATTTCAAGTAAACACTACAGTAATCAGTACACACTGTATATGTATACCAAATCATCACATTGTACACATTAAATCTATATAATTTTGTTTGTCAATTAAGTATTTTAAAAAGAAAATGAAATTTAAAAGGAAGTCTGGAGGCAGATAGCTCAGGCCTGGAGGACACCTTGAGCATCCGTGAACTGAGTCACAAGGCTGATACAGAGACTTAGCTGTCCCGTTGTCAGCTAACTACCCCATAAGTAAAATATTTGAGTTTATTAGACAAGATTAAATGAGAGGGAACAAAATGCAAAATAATCAAAGGACAAAGAGGCTTGCCTGATTACAAAAATCAAGATTTAAGCAAGAAGCAAATGCATCAAGTCAACTGTTATTACTCACCTGCTATGTGCAAATCCAGTTCTAAGTGCTGAGTGATTGGTAATAAGTCAGCTTCTTCTCAAAAGGCAGGAAGCCTCAGAAACATTTCTGACACCTCAGGCAGCAAGCTGGGGTATCGAGGAGACCTCCAGCCACATGATAAATGTGGCCTCATTCTACAGTCACTCTCCATATTCTGCCCCTTTTGCTACATTTGGGAGCCTACTGTTGAGATGAAAATCAGGAGGACCAGTCTCCAGATTGTGCTCCTCCCTCCACTCCACCACTCTTACTAGGAGTAGCTTTTAACTTTGCCACCAGCTCAGAATCTCAGGGCTATGGCCACACCAGTCTACTGAGACCAAAGATGTAATTTGCTGTCCCAAGACTGGGTGAATAGGAGCAAGATTCAACCTCGCTACCCACTTTCTGACCTCAGGCCTCCCTCTTCCTCCACCCTAAGAAGAACCTTTAGTTCCAGACATGAAAACTGGCATTCTAGCATTTATCCAGGGCTGTAGGCTGGTGTGAAATTCCCCAACCTACAGTCCTGATAAGTGAGCCTCATGGAATAGACTCACTGTGGAATAGACTCATTATGTAAATATTGGTCACTTTAACTTTCTGAGCTTCTCTTTCCCAAATGTCAATTGAGAATAACAATGAACACTGGGGGAATGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5260:HG2_PB_PB10Xdip_3832:HG2_PB_SVrefine2Falcon1plusDovetail_1259:HG3_PB_SVrefine2Falcon1Dovetail_6792:HG2_PB_SVrefine2PB10Xhap12_8216:HG2_PB_SVrefine2PBcRplusDovetail_1198;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6792;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00895373;ClusterMaxSizeDiff=0.00882767;ClusterMaxEditDist=0.0218521;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=15901;DistBack=17761;DistForward=5584;DistMin=5584;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=3579;REFWIDENED=10:45836936-45840514;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=573.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:40:0|1:24:2:6:34:./.:3:2:8:0:0/0:29:0:0/1:169:232:.:15997:.
chr10	50949910	HG2_PB_SVrefine2PB10Xhap12_8234	C	CTACACACACCACACATACCACACACACCACACATACCACACAACACACACACCACACAGACTACACACCACAAACACAATCACACACACCACACACACTACATACACTACACACACACAACCACACACACCCCACAAATACACCACACATGCACCAAACATGACACATACCACACATATCACACGCACACCACACTACACACCACACACCCCACACATACCACACACCACACAAACACCCTCACACACATTACACACATACACACCCTACACACACACCAAACACACACACATCACACACACCATACACGCCCCACACACACTATACACACCCCACACACATACGCACACCCCCACAAACCACACACGCACACACCACACATACACCACACATACCCCATACACACTCAACACACAACACACACCACACACACCACAAATGCACCACACCCACCACAAACACCACACACGACACACACCACACATGCACCACACAACACACCACACACCCACAAATACACACCACACCCCCACACACACCACACACACCATACACACATACACACCACACACACCATACACACATACACACCACACACATACACACTCCACACACACCACACATATATCACACACACCACATACACACTCCACACACACCACACATACACACACCATACACCACACACACACCACACACTACACACCACACCCACCCACGCATACCACACATATCCCCTTACATACCACACACATCCCCTACACACACGCCACATACACACACCATACACATCCCCCACAGACACACATACCCCTACATACCACACACATCCCCTACACACATGCCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5270:HG2_Ill_SVrefine2DISCOVARplusDovetail_1428:HG2_PB_pbsv_11290:HG4_PB_HySA_16443:HG4_PB_pbsv_11312:HG4_Ill_GATKHCSBGrefine_7795:HG3_PB_pbsv_11013:HG2_Ill_GATKHCSBGrefine_7611:HG2_Ill_MetaSV_554:HG2_PB_PB10Xdip_4420:HG2_PB_PB10Xdip_4419:HG4_Ill_SVrefine2DISCOVARDovetail_8075:HG3_Ill_SVrefine2DISCOVARDovetail_8279:HG4_PB_SVrefine2PBcRDovetail_5684:HG2_PB_SVrefine2PBcRplusDovetail_1214:HG2_PB_SVrefine2PB10Xhap12_8234:HG2_PB_SVrefine2Falcon2Bionano_5412:HG2_Ill_SVrefine2DISCOVARplusDovetail_1427:HG2_PB_SVrefine2Falcon1plusDovetail_1273:HG4_PB_SVrefine2Falcon1Dovetail_6846;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1427:HG2_PB_SVrefine2Falcon2Bionano_5412:HG2_PB_SVrefine2PB10Xhap12_8234:HG2_PB_SVrefine2PBcRplusDovetail_1214:HG4_Ill_SVrefine2DISCOVARDovetail_8075;NumExactMatchSVs=5;ClusterMaxShiftDist=0.148282;ClusterMaxSizeDiff=0.145871;ClusterMaxEditDist=0.282051;PBcalls=13;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=847;DistBack=31884;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=722;REFWIDENED=10:50949911-50950632;PctSeqSimilarity=0.9446;PctSizeSimilarity=0.9787;PctRecOverlap=0.3294;SizeDiff=18;StartDistance=-559;EndDistance=-559;GTMatch=0;TruScore=75;MatchId=580.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:2:14:0:27:1/1:28:938:0:36:1/1:0:22:1/1:1:80:.:1179:.
chr10	72487266	HG3_Ill_SVrefine2DISCOVARDovetail_8377	T	TCTGATGGCATCACCTCCCTAACCGCACTGCTGGCATCACATCCCTGACCGCG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1335:HG3_Ill_SVrefine2DISCOVARDovetail_8377:HG2_PB_SVrefine2Falcon2Bionano_5472;NumClusterSVs=3;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1335:HG3_Ill_SVrefine2DISCOVARDovetail_8377:HG2_PB_SVrefine2Falcon2Bionano_5472;NumExactMatchSVs=3;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=52;DistBack=-52;DistForward=29;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=229;REFWIDENED=10:72487267-72487495;PctSeqSimilarity=0.9538;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-77;EndDistance=-77;GTMatch=0;TruScore=65;MatchId=623.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:0|1:27:4:3:28:0/0:9:0:13:0:0/0:31:0:./.:.:.:.:.:.
chr10	73448108	HG3_PB_SVrefine2Falcon1Dovetail_6879	C	CTGGAATCAGGGACAGTAGAGTCATGGATGGTGGAGTCATGGATAGTGGAGTCAGGGACATTGGAGTTAGAGATGCTGGAGCCAGGGATGGTAGAGCCAGGGATGGTGGAATAAGGATGGTGGAGCCAGGGGTCGTGGAGCCAGGGATGGTGGAGCCAGGGGTGGTGGAGTCAGGGGTGGTGGAACCAGGGATGGTGGAGTCAGGGATGGTGGAGCCAGGGGTTGTGGAGTCAGGGGTGGTGGAGTCAGGGGTGGTGGAGCCAGGGGTGGTGGAGCCAGGGGTGGTGGAGTCAGGGATGATGGAGCCAGGGGTGGTGGAGTCAGGGGTGGTGGAGCCAACGGTGGTGGAGCCAGGGGTGGTGGAGTCAGGGGTGGTGGAGTCAAGGGTGGTGGAGCCAGGGGTGGTGGAGCCAGGGATGGTGGAGCCAGGGGTGGTGGAGTCAGGGGTGGTGGAGCCAACGGTGGTGGAGCCAGGGGTGGTGGAGTCAGGGGTGGTGGAGTCAGGGGTGGTGGAGTCAGGGATGATGGAGCCAGGGGTGGTGGAGCCAGGGATGGTGGAGTCAGGGGTGGTGGAGTCAGGGGTGGTGGAGCCAGGGGTGGTGGAGCCAACGGTGGTGGAGTCAGGGGTGGTGGAGTCCAGGGTGGTGGAGCCAGGGGTAGAGGAGTCAGGGATGGTGGAGTCAAGTGCCGTGGACCCAGGGATGGTGGAGCCAGGGGTGGTGGAGTCAGGGATGGTGGAGTCAGGGATGGTGGAGCCAGAGGTGGTGGAGCCAGGGATGGTGGAGCCAGGGGTGGTGGAGCCAGGGGTGGTGGAGCCAACGGTGGTGGAGTCAGGGATGGTGGAGCCAGGGGTGGTGGAGCCAGGGGTGGTGGAGTCAGGGGTGGTGGAGCCAGGGATGGTGGAGCCAGGTGTGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6879:HG3_PB_HySA_17221:HG3_PB_pbsv_11135:HG4_PB_pbsv_11420:HG3_PB_SVrefine2PBcRDovetail_5336:HG2_PB_SVrefine2Falcon1plusDovetail_1339:HG2_PB_SVrefine2PBcRplusDovetail_1278:HG4_PB_SVrefine2Falcon1Dovetail_6923:HG2_PB_SVrefine2Falcon2Bionano_5476:HG4_PB_SVrefine2PBcRDovetail_5710;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6879:HG4_PB_SVrefine2PBcRDovetail_5710;NumExactMatchSVs=2;ClusterMaxShiftDist=0.277676;ClusterMaxSizeDiff=0.275229;ClusterMaxEditDist=0.388991;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=914;DistBack=20211;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=574;REFWIDENED=10:73448109-73448682;PctSeqSimilarity=0.9756;PctSizeSimilarity=1;PctRecOverlap=0.388;SizeDiff=0;StartDistance=-560;EndDistance=-560;GTMatch=1;TruScore=78;MatchId=627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:75:1/1:2:17:0:23:1/1:0:29:0:5:./.:0:0:0/1:14:73:.:840:.
chr10	93771833	HG2_PB_SVrefine2Falcon2Bionano_5525	T	TCCTTCCCTCCCTCCCTCCCCTCCCCCTCCCTCCCCTCCTGTCCCCCCTCTCTCCCATCCCCTCCTCCCCTCCCCTGCTCTCCTCCCCTCTCCTCCTCCCCTCCCCTCTCCTCCTCCCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCCCTCCCCCCTCCCCTCCTCCCTCCCCCCCCTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1328:HG3_PB_pbsv_11206:HG2_PB_SVrefine2PB10Xhap12_8331:HG2_PB_SVrefine2Falcon2Bionano_5525:HG4_PB_SVrefine2Falcon1Dovetail_6978:HG3_PB_SVrefine2PBcRDovetail_5368:HG2_PB_SVrefine2Falcon1plusDovetail_1387:HG3_PB_SVrefine2Falcon1Dovetail_6929:HG4_PB_SVrefine2PBcRDovetail_5774;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5525;NumExactMatchSVs=1;ClusterMaxShiftDist=0.149425;ClusterMaxSizeDiff=0.149425;ClusterMaxEditDist=0.269461;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=180;DistBack=-184;DistForward=92;DistMin=-184;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=194;REFWIDENED=10:93771834-93772027;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=658.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:30:1/1:2:15:0:7:./.:0:1:1:7:./.:0:1:./.:.:.:.:.:.
chr10	115449670	HG4_Ill_SVrefine2DISCOVARDovetail_8364	T	TCCCCGAAGGGCTTTGACCTTCTTGTATTTGGATGTCTAAATCTCTGGCAAGGCTAGGGAAGTCTTCCTCAATTATTCCCTCAAATAAATTTTCCAAAATTTTTACTTTTTCTTCTCCCTCAGGAACA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8154:HG3_PB_HySA_17546:HG2_PB_PB10Xdip_2952:HG4_Ill_GATKHCSBGrefine_8079:HG4_Ill_250bpfermikitraw_15459:HG2_Ill_250bpfermikitraw_15566:HG3_PB_HySA_17545:HG2_PB_HySA_21051:HG4_PB_HySA_16926:HG3_PB_pbsv_11312:HG4_PB_SVrefine2PBcRDovetail_5839:HG2_PB_pbsv_11597:HG4_PB_SVrefine2Falcon1Dovetail_7055:HG4_PB_pbsv_11605:HG4_Ill_SVrefine2DISCOVARDovetail_8364:HG2_PB_SVrefine2PBcRplusDovetail_1398:HG2_PB_SVrefine2PB10Xhap12_8382:HG2_PB_SVrefine2Falcon2Bionano_5596:HG2_PB_SVrefine2Falcon1plusDovetail_1462:HG2_Ill_SVrefine2DISCOVARplusDovetail_1701;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8154:HG4_PB_SVrefine2PBcRDovetail_5839:HG4_PB_SVrefine2Falcon1Dovetail_7055:HG4_Ill_SVrefine2DISCOVARDovetail_8364:HG2_PB_SVrefine2PBcRplusDovetail_1398:HG2_PB_SVrefine2PB10Xhap12_8382:HG2_PB_SVrefine2Falcon2Bionano_5596:HG2_PB_SVrefine2Falcon1plusDovetail_1462:HG2_Ill_SVrefine2DISCOVARplusDovetail_1701;NumExactMatchSVs=9;ClusterMaxShiftDist=0.119522;ClusterMaxSizeDiff=0.0876494;ClusterMaxEditDist=0.291188;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=127;DistBack=-67;DistForward=-1;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=129;REFWIDENED=10:115449671-115449799;PctSeqSimilarity=0.9883;PctSizeSimilarity=0.9843;PctRecOverlap=0;SizeDiff=2;StartDistance=-129;EndDistance=-129;GTMatch=0;TruScore=65;MatchId=700.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:45:1/1:1:13:2:8:./.:1:9:1:19:1/1:0:40:./.:.:.:.:.:.
chr10	118491831	HG3_PB_SVrefine2Falcon1Dovetail_7018	A	AAAAAAAACAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7018:HG3_PB_pbsv_11322:HG2_PB_pbsv_11609:HG4_PB_SVrefine2Falcon1Dovetail_7065;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7018:HG4_PB_SVrefine2Falcon1Dovetail_7065;NumExactMatchSVs=2;ClusterMaxShiftDist=0.041425;ClusterMaxSizeDiff=0.038111;ClusterMaxEditDist=0.135425;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=591;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=49;REFWIDENED=10:118491832-118491880;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=705.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:16:./.:12:4:2:15:./.:1:4:15:0:0/1:15:12:0/1:9:19:.:.:.
chr10	120602591	HG4_Ill_SVrefine2DISCOVARDovetail_8385	T	TGCAGAGAGGAACTACCCTCTCTGCTGATAGCTGAACACTTGCCAGGACAACCTGCATAGCAAGAGAGGAGCTACCCTCTCTGCTAGGAGCTGAACACTGGTCGGGACAACTTGCATAGCAGAGAGGAGCTACCCTCTCTTCTAGGAGCTGAACACTAGTCAGGACAACTTGCATA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8174:HG2_PB_PB10Xdip_2974:HG2_PB_pbsv_11617:HG4_Ill_250bpfermikitraw_15497:HG4_PB_pbsv_11627:HG4_Ill_150bpfermikitraw_14878:HG3_Ill_GATKHC_18666:HG3_Ill_250bpfermikitraw_15190:HG3_Ill_150bpfermikitraw_14739:HG4_PB_SVrefine2Falcon1Dovetail_7072:HG3_PB_HySA_17592:HG4_PB_HySA_16976:HG2_PB_HySA_21114:HG4_PB_HySA_16975:HG3_PB_pbsv_11331:HG4_PB_SVrefine2PBcRDovetail_5854:HG4_Ill_SVrefine2DISCOVARDovetail_8385:HG3_PB_SVrefine2PBcRDovetail_5449:HG3_PB_SVrefine2Falcon1Dovetail_7026:HG3_Ill_SVrefine2DISCOVARDovetail_8594:HG2_PB_SVrefine2PBcRplusDovetail_1415:HG2_PB_SVrefine2PB10Xhap12_8403:HG2_PB_SVrefine2Falcon2Bionano_5609:HG2_PB_SVrefine2Falcon1plusDovetail_1478:HG2_Ill_SVrefine2DISCOVARplusDovetail_1717;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8174:HG4_PB_SVrefine2PBcRDovetail_5854:HG4_Ill_SVrefine2DISCOVARDovetail_8385:HG3_PB_SVrefine2PBcRDovetail_5449:HG3_PB_SVrefine2Falcon1Dovetail_7026:HG3_Ill_SVrefine2DISCOVARDovetail_8594:HG2_PB_SVrefine2PBcRplusDovetail_1415:HG2_PB_SVrefine2PB10Xhap12_8403:HG2_PB_SVrefine2Falcon2Bionano_5609:HG2_PB_SVrefine2Falcon1plusDovetail_1478:HG2_Ill_SVrefine2DISCOVARplusDovetail_1717;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0835655;ClusterMaxSizeDiff=0.0612813;ClusterMaxEditDist=0.267045;PBcalls=16;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=175;DistBack=28576;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=386;REFWIDENED=10:120602592-120602977;PctSeqSimilarity=0.9679;PctSizeSimilarity=0.9943;PctRecOverlap=0;SizeDiff=1;StartDistance=-276;EndDistance=-276;GTMatch=0;TruScore=65;MatchId=706.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:54:./.:2:6:1:3:./.:0:6:3:4:0/1:8:14:./.:.:.:.:.:.
chr10	123343850	HG2_PB_SVrefine2Falcon2Bionano_5619	A	ACCGCACCCCACCCCAACCAATCCCATAACCCCTCTCCATCCCGCACCCCACCCCAACCTATCCCATAACCCCTCTCCATCCCACACCCCACCCCAACCGATCCCATAACCCCTCTCCATCCCGCACCCCACCCCAACCGATCCCATAACCCCTCTCCATCCCGCACCCCACCCCAACCGATCCCATAACCCCTCTCCATCCCGCACCCCACCCCAAACGATCCCATAACCCCTCTCCATCCCGCACCACCCCAACCGATCCCATAACCCCTCTCCATCCCGCACCCCACCCCAACCGATCCCATAACCCCTCTCCATCCCACACCCCACCCCAACCGATCCCATAACCCCTCTCCATCCCGCACCCCACCCCAACCGATCCCATAACCCCTCTCCATC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1487:HG3_PB_HySA_17611:HG2_PB_PB10Xdip_3001:HG3_PB_pbsv_11347:HG2_PB_pbsv_11639:HG3_PB_SVrefine2Falcon1Dovetail_7036:HG2_PB_SVrefine2PB10Xhap12_8415:HG2_PB_SVrefine2Falcon2Bionano_5619:HG3_PB_SVrefine2PBcRDovetail_5457:HG4_PB_pbsv_11649:HG2_PB_SVrefine2PBcRplusDovetail_1426:HG4_PB_SVrefine2Falcon1Dovetail_7084;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5619:HG2_PB_SVrefine2PB10Xhap12_8415;NumExactMatchSVs=2;ClusterMaxShiftDist=0.149533;ClusterMaxSizeDiff=0.136182;ClusterMaxEditDist=0.267717;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=398;DistBack=7157;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=670;REFWIDENED=10:123343851-123344520;PctSeqSimilarity=0.9709;PctSizeSimilarity=0.9749;PctRecOverlap=0;SizeDiff=10;StartDistance=-482;EndDistance=-482;GTMatch=0;TruScore=64;MatchId=710.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:2:21:./.:0:3:0:2:1/1:2:37:1:34:./.:0:2:./.:1:7:.:.:.
chr10	123960073	HG2_PB_pbsv_11641	C	CCCACATGTACATGATGAGGACGGGCACCTCACCTGCCCACAGTGGCTGTGTTCACATGGGGAGGCAGTTACCTACCTGCCCACAGTAGG	10	PASS	ClusterIDs=HG2_PB_HySA_21156:HG2_PB_pbsv_11641:HG3_PB_HySA_17614:HG2_PB_PB10Xdip_3002:HG3_PB_pbsv_11348;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_11641;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0434783;ClusterMaxEditDist=0.241758;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=89;DistBack=0;DistForward=19;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1176;REFWIDENED=10:123959873-123961048;PctSeqSimilarity=0.9863;PctSizeSimilarity=0.9889;PctRecOverlap=0;SizeDiff=-1;StartDistance=201;EndDistance=201;GTMatch=0;TruScore=65;MatchId=711.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:39:0|1:14:4:3:30:./.:13:1:18:0:0/0:28:1:./.:.:.:.:.:.
chr10	125013868	HG2_PB_SVrefine2Falcon1plusDovetail_1490	T	TCATCACCACCACCATCATCACACCACCACCACCACCATCATCACTATCATCATCACACCACCACCACCACCATCATCACTATCATCATCACACCATCACCACCACCATCATCACACCACCACCACCACCATCATCACTATCATCATCATCACCACACCACCACCATCACCACCACCACCATCACACCACCACCACCACTGTCGTCATCACTATCATCATCATCACACCACCACCACCATCATCACACCACCACCACCACCACCGTCGTCATCACTATCATCATCATCATCACACCGCCACCATCACCACCACCACCATCACACCACCACCACCACCACCACCGTCACCATCACTATCATCATCATCACACCACCACCACCACCACCATCATCACTATCATCATCATCATCACCACACCACCACCATCACCACCACCACCATCACACCACCACCACCACTGTCGTCATCACTATCATCATCATCACACCACCACCACCACCATTATCACACCACCACCACCGCCACCACCATCATCACTATCATCATCACACCACCACCACCACCATCATCACTATCATCATCACACCATCACCACCACCATCATCACACCACCACCACCACCACCACCACCATCATCACTATCATCATCATCACCACACCACCACCATCACCACCACCACCATCACACCACCACCACCACTGTCGTCATCACTATCATCATCATCACACCACCACCACCACCACCATCACACCACCACCACCACCACCGTCGTCATCACTATCATCATCATCATCACACCGCCACCATCACCACCACCACCATCACACCACCACCACCACCACACCACCGTCGCCATCACTATCATCATCATCACACCACCACCACCACCACAACCATCATCACTATCATCATCATCATCACCACACCACCACCATCACCACCACCACCATCACACCACCACCACCACTGTCGTCATCACTATCATCATCATCACACCACCACCACCACCACCATCACACCACCACCACCACCACCACCATCATCACTATCATCATCACACCACCACCACCACCATCATCACACCACCACCACCACCACCACCACCATCATCACTATCATCATCATCATCACCACACCACCACCATCACCACCACCACCATCACACCACCACCACCACCACTGTCGTCATCATTATCATCATCATCATCACACCACCACCACCACCACCATCACACCACCACCACCGCCACCGTCGTCATCACTATCATCATCATCATCACACCACCACCATCACCACCACCATCACACCACCACCACCACTACTGTCATCATCACTATCATCATCATCACACCACCACCACCACCATCATCACACCACCACCACCATCGTCATCACTATCATCATCATCATCACACCACCACCACCACCACCATCACACCACCACCACCATCGTCATCACTATCATCATCACACCACCACCATCATCACACCACTACCATCATCACACCACCACCACCGTCACACCACCACCACCATCATCATCACTACCACCATCATCATCACACCACCACCACCATCACACACACCACCATCACACCACCACCATCATCATCACTACCACCATCATCACTGCCACCATCATCATCACCATCATCACCACCACCATCACCACCATCACCACCACCACCACCATTATCATCACTACCACCATCATCATCACCATTGTCACACCACCATCATCACCATCATCACCACACACCACCACCATCACCATCATCATCACACACCACCATCACAACACCATCTCACCATCATCATCACACCACCACCACCATCAGCACCACCACCATCATCGTCACCATCACCATCATCACACCACCACAATCATCACCACCACCATCATCACACGACCACCACCACCATTATCATCATTACCGCCATCATCATCACCATAATCACACCACCACCATCACCACCATCACCATCACCACCATCATCACACCACCACCATTATCATCACTATCATCATCATCACCATCATCACAAACCACCATCATCACACCACCACCATCATCACACACCACCATCACACACCACCACCATCACACACCACCACCATCACACACCACCATCACCATCACTATCATCACACCACCATTATCACACCACCACCATTGTCATCACCATCACCATTATCACACCACCACCATCATCACACCACACCACCATCATCATCATCACCATCACCATTACATCACCACCATCATCACCATCACCATCACACACCACCAGCATCATCACCATCACTCTCATCACACCACCATCATCACACCACCATCATCATCACCATCATCATCACCATCACCACACCACCATCCTCATATCACCATCACCACCACCACCATCACCATCACCACCGCAATCATCATACTACCATCATCACCATCATCACACCACCACCACCATTACCATCACCATCATCACACCACCACCAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7042:HG2_PB_pbsv_11644:HG2_PB_SVrefine2Falcon2Bionano_5624:HG2_PB_SVrefine2PB10Xhap12_8421:HG2_PB_SVrefine2Falcon1plusDovetail_1490:HG2_PB_SVrefine2PBcRplusDovetail_1430;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1490;NumExactMatchSVs=1;ClusterMaxShiftDist=0.154554;ClusterMaxSizeDiff=0.154554;ClusterMaxEditDist=0.289419;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=2497;DistBack=-1591;DistForward=-1;DistMin=-1591;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=789;REFWIDENED=10:125013869-125014657;PctSeqSimilarity=0.8396;PctSizeSimilarity=0.6828;PctRecOverlap=0.5795;SizeDiff=792;StartDistance=-654;EndDistance=-654;GTMatch=1;TruScore=70;MatchId=713.0.3	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:73:1/1:3:14:3:20:./.:14:125:11:138:./.:0:0:1/1:3:449:.:3173:.
chr10	128815454	HG2_PB_SVrefine2Falcon2Bionano_5640	T	CACACACACACACACAGATGCAGACACCATAAACACACAGATACACCACAAACACATACACACCAACACATGATACACCATAAAAACAGACATACACACACAGATACAGACACCACAAACACACACACACACAGATACACCACACATACAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5640:HG3_Ill_SVrefine2DISCOVARDovetail_8623;NumClusterSVs=2;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5640:HG3_Ill_SVrefine2DISCOVARDovetail_8623;NumExactMatchSVs=2;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=150;DistBack=116;DistForward=112874;DistMin=116;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=597;REFWIDENED=10:128814902-128815498;PctSeqSimilarity=0.9269;PctSizeSimilarity=0.9333;PctRecOverlap=0;SizeDiff=10;StartDistance=148;EndDistance=148;GTMatch=0;TruScore=62;MatchId=721.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:33:0|1:29:4:0:27:./.:51:490:34:75:./.:1:12:./.:.:.:.:.:.
chr10	132840253	HG3_PB_SVrefine2Falcon1Dovetail_7101	G	GTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATCGGGAGTGGGATAAGATAGGGTATGGGGGGCGGGGTAAGATAGGGTATGGGGGTGGGTAAGATAGGGTATGGGGGGTGGGTAAGATAGGGTATCGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGTAAGATAGGGTATCGGGAGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATCGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATCGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGTGGGGTAAGATAGGGTATGGGGTGGGGTAAGATAGGGTATGGGGTGGGGTAAGATAGGGTATGGGGTGGGGTAAGATAGGGTATGGGGGGGGGGGTAAGATAGGGTATCGGGGTGGGGTAAGATAGGGTATCGGGGATGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGTAAGATAGGGTATCGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGCGGGGTGGGGTAAGATAGGGTATCGGGGGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATCGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGTAAGATAGGGTATGGGGTGGGGTAAGATAGGGTATCGGGGATGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGTAAGATAGGGTATCGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATCGGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGTGGGGTAAGATAGGGTATGGGGGTGGGTAAGATAGGGTATGGGGTGGGTAAGATAGGTATGGGGGGTGGGTAAGATAGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5668:HG3_PB_SVrefine2Falcon1Dovetail_7101:HG4_PB_SVrefine2Falcon1Dovetail_7129:HG2_PB_SVrefine2Falcon1plusDovetail_1543;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7101;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0397244;ClusterMaxSizeDiff=0.0397244;ClusterMaxEditDist=0.0753789;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1231;DistBack=17;DistForward=139;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1161;REFWIDENED=10:132840254-132841414;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=737.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:46:1/1:3:14:0:7:./.:0:0:0:0:./.:3:0:./.:3:5:.:3027:.
chr10	133142480	HG2_PB_SVrefine2Falcon1plusDovetail_1549	C	CCAGAGGGAGAGGCATCGGGGCGTGCGGTTCCAGGTATCAGCTCAGAGGGAGAAGCATCGGGGCGCGCGGTTCCAGGTATCAGCT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1549:HG2_PB_HySA_21351:HG2_PB_pbsv_11746:HG2_PB_SVrefine2Falcon2Bionano_5675;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1549:HG2_PB_SVrefine2Falcon2Bionano_5675;NumExactMatchSVs=2;ClusterMaxShiftDist=0.111732;ClusterMaxSizeDiff=0.100559;ClusterMaxEditDist=0.24581;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=84;DistBack=19596;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=382;REFWIDENED=10:133142481-133142862;PctSeqSimilarity=0.988;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-249;EndDistance=-249;GTMatch=0;TruScore=66;MatchId=739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:./.:11:7:10:19:./.:3:0:2:0:0/0:11:0:./.:.:.:.:.:.
chr10	133639871	HG4_PB_SVrefine2PBcRDovetail_5916	G	GCCACACCAGCCTCACCTTTCTGCAGCCAATGGACCTTCCACACCAGACTCACCTGCCTGCAGCCAATGGACCTTCCACACCAGCCTCACCTGCCTGCACCCAATGGACCTTCCACAACAGGCTCACCTGCCTGTAGCCAATGGACCTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1557:HG2_PB_HySA_21375:HG2_PB_pbsv_11761:HG4_PB_HySA_17158:HG4_PB_pbsv_11752:HG4_PB_SVrefine2PBcRDovetail_5916:HG4_PB_SVrefine2Falcon1Dovetail_7143;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1557:HG4_PB_SVrefine2PBcRDovetail_5916:HG4_PB_SVrefine2Falcon1Dovetail_7143;NumExactMatchSVs=3;ClusterMaxShiftDist=0.108475;ClusterMaxSizeDiff=0.101695;ClusterMaxEditDist=0.283828;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=148;DistBack=49088;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1828;REFWIDENED=10:133639872-133641655;PctSeqSimilarity=0.9755;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-178;EndDistance=-178;GTMatch=0;TruScore=65;MatchId=743.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:37:./.:21:5:11:25:./.:0:0:1:1:0/0:10:0:./.:.:.:.:.:.
chr10	134201666	HG2_PB_SVrefine2Falcon2Bionano_5700	T	TGGCGCGGGCTCATGCGGGGGCGGGGGGATTCGTGCGCGGGCGGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGGCGGGGGCTCATGCGGGGGCGGGGGCTCATGCGGGGGCGGGGGGATTCGTGCGCGGGCGGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGCTCATGCGGGGGGCGGGGGGATCATGCGGGGGCGGGGGCTCATGCGGGGGGCGGGGGCTCATGCGGGGGCGGGGGCTCATGCGGGGGGCGGGGGGATTCGTGCGCGGGCGGGGGGCTCATGCGGGGGCGGGGGGATTCGTGCGCGGGCGGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGGCGGGGGCTCATGCGGGGGCGGGGGCTCATGCGGGGGGCGGGGGGATTCGTGCGCGGGCGGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGCTCATGCGGGGGGCGGGGGGATCATGCGGGGGCGGGGGCTCATGCGGGGGGCGGGGGCTCATGCGGGGGCGGGGGCTCATGCGGGGGGCGGGGGGATTCGTGCGCGGGCGGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGGTTTCATGGCGGGGGCGGGGGTTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGGTTCATGCGGGGGCGGGGGGCTCATGCGGGGGCGGGGGCTCATGCGGGGGGCGGGGGGCTCGTGCGGGGGCGGGGGCTCATGCGGGGGGCGGGGGGTTCGTGCGGGGCGGCGGGGTTCGTGCGGGGGCGGGGACTCATGCGGGGCGGGGGGCTCGTGCGGGGGCGGCGGGGTTCGTGCGGGGGCGGGGGCTCATGCGGGGACGGGGGGCTCGTGCGGGGGCGGCGGGGTTCGTGCGGGGGCGGCGGGGTTCGTGCGGGGGCGGCGGGGGCTCGTGCGGGGGCGGCGGGCTCGTGCGGGGGCGGGGGGCTCGTGCGGGGCGGGGGGCTCGTGCGGGGGGCGGGGGGGCTCGTGCGGGGGCGGCGGGGTTCGTGCGGGGGCGGCGGGGTTCGTGCGGGGCGGGGGGCTCGTGCGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1576:HG4_PB_SVrefine2Falcon1Dovetail_7165:HG3_PB_SVrefine2PBcRDovetail_5515:HG2_PB_SVrefine2PB10Xhap12_8515:HG2_PB_SVrefine2PBcRplusDovetail_1496:HG2_PB_SVrefine2Falcon2Bionano_5700:HG3_PB_SVrefine2Falcon1Dovetail_7132;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5700;NumExactMatchSVs=1;ClusterMaxShiftDist=0.26087;ClusterMaxSizeDiff=0.26087;ClusterMaxEditDist=0.274746;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1221;DistBack=702;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=504;REFWIDENED=10:134201667-134202170;PctSeqSimilarity=0.9337;PctSizeSimilarity=0.9492;PctRecOverlap=0.561;SizeDiff=62;StartDistance=-505;EndDistance=-505;GTMatch=1;TruScore=81;MatchId=747.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:1:31:2:15:./.:0:0:0:0:./.:0:0:0/1:13:37:.:5424:.
chr10	134813114	HG3_PB_SVrefine2Falcon1Dovetail_7162	T	TTTCTCCACCTCCATCCCCTGAGCCTCCCAGTGAGGCCCTCCTGTCTCTCCACCTCCATCCCCTGAGCCTCCCAGTGAGGCCCTCCTGTCTCTCCACCTCCATCCCCTGAGCCTCCCAGTGAGGCCCTCCTGTCTCTCCACCTCCATCCCCTGAGCCTCCCAGTGAGGCCCTCCTG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7192:HG3_PB_assemblyticsfalcon_3618:HG3_PB_SVrefine2Falcon1Dovetail_7162:HG3_PB_pbsv_11544:HG2_PB_SVrefine2Falcon1plusDovetail_1605:HG2_PB_pbsv_11847:HG2_PB_SVrefine2Falcon1plusDovetail_1604:HG3_PB_SVrefine2Falcon1Dovetail_7161;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7162;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0507042;ClusterMaxSizeDiff=0.0394366;ClusterMaxEditDist=0.219101;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=175;DistBack=-32;DistForward=89;DistMin=-32;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=397;REFWIDENED=10:134812809-134813205;PctSeqSimilarity=0.9875;PctSizeSimilarity=0.9943;PctRecOverlap=0;SizeDiff=-1;StartDistance=184;EndDistance=184;GTMatch=0;TruScore=66;MatchId=759.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:1|0:2:23:23:4:./.:1:0:2:1:./.:4:4:./.:.:.:.:.:.
chr10	134824201	HG2_PB_SVrefine2PB10Xhap12_8549	G	GGTGTTAGCGTGTGTGATGTGTTAGCATGTGTGATGTGTGTTAGTGGGTGTGGTGTGTGTTGGTGGGTGTGGTGTGTGTTGGTGTGGTGTGTTAGTATGTGTGATGTGTTTTGGCATGTGTGATGTGTTAGTGTGTGATGTGTTAATGTGTTACCTGTTAGCATGTGTGATGTGTGTTTGTGTGATGTGTGTTAGCGTGTGTGATGTGTGCTTGTGTGATGTGTTTTCGTGTGTGTGATTGTTAGTGTGTGTGATGTGTGCTTGTGTGATGTGTTTTAGCACGTGTGATGTGTGTTAGTGTGTGATGTGTGTGTTAGTGTGTGATGTGTGTTAGCGTGTGTGATGTGTGCTTGTGTGATGTGTTAGTGTGTGTGATGTGTGCTTGTGATGTGTTTTAGCACGTGTGATGTGTGTTAGTGTGTGATGTGTGTGTTAGTGTGTGATGTGTGTTAGCGTGTGTGATGTGTGCTTGTGTGATGTGTTTTCGTGTGTGTGATGTTAGTGTGTGTGATGTGTGCTTGTGTGATGTGTTTTAGCACGTGTGATGTGTGTTAGTGTGTGATGTGTGTGTTAGTGTGTGATGTGTGTTAGCGTGTGTGATGTGTGCTTGTGTGATGTGTTTTCGTGTGTGTGATGTGTGCTTGTGTGATGTTTTAGCACGTGTGATGTGTGTTAGTGTGTGATGTGTGTTAGCATGTGTGATGTGTGCTTGTGTGATGTGTTTTTGTGTGTGTGATGTGTTAGTGTGTGTGATGTGTGCTTGTGTGATGTGTTTTAGCACGTGTGATGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1606:HG3_PB_SVrefine2Falcon1Dovetail_7166:HG2_PB_pbsv_11849:HG3_PB_assemblyticsfalcon_3620:HG2_PB_HySA_21498:HG4_PB_SVrefine2Falcon1Dovetail_7195:HG3_PB_SVrefine2Falcon1Dovetail_7165:HG2_PB_SVrefine2PBcRplusDovetail_1520:HG4_PB_SVrefine2Falcon1Dovetail_7194:HG3_PB_SVrefine2Falcon1Dovetail_7164:HG3_PB_SVrefine2Falcon1Dovetail_7163:HG2_PB_SVrefine2PBcRplusDovetail_1519:HG2_PB_SVrefine2PB10Xhap12_8549:HG2_PB_SVrefine2Falcon2Bionano_5726;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1606:HG2_PB_SVrefine2PBcRplusDovetail_1519:HG2_PB_SVrefine2PB10Xhap12_8549:HG2_PB_SVrefine2Falcon2Bionano_5726;NumExactMatchSVs=4;ClusterMaxShiftDist=0.200136;ClusterMaxSizeDiff=0.200136;ClusterMaxEditDist=0.338798;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=789;DistBack=256;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=568;REFWIDENED=10:134824202-134824769;PctSeqSimilarity=0.9588;PctSizeSimilarity=0.9531;PctRecOverlap=0.2636;SizeDiff=37;StartDistance=-563;EndDistance=-563;GTMatch=0;TruScore=72;MatchId=760.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:71:1/1:3:27:0:20:1/1:0:170:0:176:./.:0:0:1/1:1:43:.:.:.
chr10	134843348	HG2_PB_SVrefine2PBcRplusDovetail_1521	A	AACCCAACAACGTGCCGGGAAACCCAAACCACAGGTTCCCCCGTTCCTCCAGGAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5727:HG2_PB_assemblyticsfalcon_3660:HG2_PB_HySA_21505:HG2_PB_pbsv_11852:HG2_PB_PB10Xdip_3268:HG3_PB_HySA_17867:HG4_PB_HySA_17247:HG4_PB_SVrefine2PBcRDovetail_5950:HG3_PB_SVrefine2PBcRDovetail_5538:HG3_PB_SVrefine2Falcon1Dovetail_7168:HG2_PB_SVrefine2PBcRplusDovetail_1521:HG2_PB_SVrefine2PB10Xhap12_8550;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5727:HG4_PB_SVrefine2PBcRDovetail_5950:HG3_PB_SVrefine2PBcRDovetail_5538:HG3_PB_SVrefine2Falcon1Dovetail_7168:HG2_PB_SVrefine2PBcRplusDovetail_1521:HG2_PB_SVrefine2PB10Xhap12_8550;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.234234;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=54;DistBack=6003;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=381;REFWIDENED=10:134843349-134843729;PctSeqSimilarity=0.988;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-70;EndDistance=-70;GTMatch=0;TruScore=66;MatchId=761.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:51:1/1:3:13:3:13:./.:2:0:5:0:0/0:22:0:./.:.:.:.:.:.
chr11	400746	HG2_PB_SVrefine2PB10Xhap12_8595	A	ACCCCGGCCCCGCTGACCCCGGCCCCGCTCACCCCCGCCCCGCTCACCCCCGCCCCGCTCACCCCGCCCCGCTCACCCCGGACCCCGCTCACCCCCGCCCCGCTCACACCCGACCCCGCTCACCCCCGCCCCGCTCACCCCCGCCCCGCTCACCCCCGCCCCGCTCACCCCCGCCCCGCTCACCCCGGACCCCGCTCACCCCCGCCCCGCTCACACCCGACCCCGCTCACACCCGCCCCGCTCACCCCCGCCCCGCTCACCCCCGCCCCGCTCACCCCGGACCCCGCTCACACCCGGCCCGCTCACACCCGGCCCCGCTCACACCCGCCCCGCTCACCCCCGCCCCGCTCACCCCCGCCCCGCTCACACCCGGCCCCGCTCACACCCGGCCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCCGCTCACCCCCGGCCCCCGCTCACACCCGCCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCCGCTCACCCCCGGCCCCGCTCACACCCGCCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCCGCTCACACCCGCCCCGCTCACCCCCCCCCGCCCCCCCCCGCTCACCCCCGGCCCCGCTCACACCCGGCCCCGCTCACACCCGGCCCCGCTCACACCCGCCCCGCTCACACCCGGCCCCGCTCACACCCGGCCCGCTCACCCCCGGCCCCGCTCACCCCGGCCCCGCTCACACCCGCCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCCGCTCACCCCCGGCCCCGCTCACACCCGCCCCGCTCACACCCGGCCCCGCTCACACCCGGCCCCGCTCACACCCGCCCCGCTCACACCCGGCCCCGCTCACACCCGGCCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCCGCTCACACCCGCCCCGCTCACCCCCGGCCCCGCTCACCCCCGGCCCCGCTCACACCCGCCCCGCTCACACCCGCCCCCGCTCACCCCCGGCCCGCTCACACCCGCCCCGCTCACCCCGGCCCCGCTCACCCCCGGCCCCGCTCACACCCGCCCCGCCCCGCTCACCCCCGGCCCCGCTCACACCCGCCCCGCTCAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7210:HG2_PB_SVrefine2Falcon2Bionano_5762:HG2_PB_SVrefine2Falcon1plusDovetail_1643:HG2_PB_SVrefine2PB10Xhap12_8595:HG2_PB_SVrefine2PBcRplusDovetail_1563;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8595;NumExactMatchSVs=1;ClusterMaxShiftDist=0.111675;ClusterMaxSizeDiff=0.111675;ClusterMaxEditDist=0.120135;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1247;DistBack=-20920;DistForward=0;DistMin=-20920;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1897;REFWIDENED=11:400747-402643;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=771.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:7:37:1/1:1:4:1:4:./.:2:6:0:4:./.:0:4:./.:1:4:.:3537:.
chr11	961740	HG2_PB_SVrefine2PB10Xhap12_8626	T	CAGAGTTGCCACCAGTGAAAAGTAAAGGGCAGAAGCAGATGGAGATGTGGGTCTGACAGTCGCCGCCACCAGTGAAAAGTAAAGGGCAGAAGCAGATGGAGATGTGGGTCTGAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8626:HG4_PB_SVrefine2Falcon1Dovetail_7272:HG3_PB_SVrefine2Falcon1Dovetail_7231:HG2_PB_SVrefine2Falcon1plusDovetail_1667:HG2_PB_SVrefine2Falcon2Bionano_5789:HG3_PB_SVrefine2PBcRDovetail_5582;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8626:HG3_PB_SVrefine2PBcRDovetail_5582;NumExactMatchSVs=2;ClusterMaxShiftDist=0.176;ClusterMaxSizeDiff=0.176;ClusterMaxEditDist=0.32;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=113;DistBack=155;DistForward=148;DistMin=148;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=978;REFWIDENED=11:961067-962044;PctSeqSimilarity=0.9666;PctSizeSimilarity=0.9381;PctRecOverlap=0;SizeDiff=7;StartDistance=399;EndDistance=399;GTMatch=0;TruScore=63;MatchId=779.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:24:0|1:16:2:1:24:./.:4:1:4:2:./.:3:0:./.:.:.:.:2553:.
chr11	7835275	HG3_PB_SVrefine2Falcon1Dovetail_7305	A	ATGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAACTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAATGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGTATTCCTATACACCAACAACAGACAAACAGAAGAGCCAAATCATGAGTCAACTCGCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAACAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGTAGGAAGAATCAGTATCGTGAAATGGCCATACTGCCCAAGGTATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCACATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACATACTACCTGACTTCAAACCTATACTACAAGGCTACAGTAACCAAAACAGCACGGTACTGGTACCAAAACACAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAACGCCACATATCTACAACTATCTGAATCTTGACAAACCTGAGAAAAACAGCAATGGGAAAGGATTCTCTATTTAATAAAGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGACTTAAAGGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGATATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCCAACAAATTTACAAGAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAAGACATTTATGCAGCCAAAAAAACACATGAAAAAATGCTCACCATCACTGGCCATCAGAGAAATGCAAATCAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGAAACAACAGGTGCTGGAGACGATGTGGAGAAATAGGAACACTTTTACACTGTTAGTGGGATTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCAATTCCTCAGGGATCTAGAAGTAGAAATACTATTTGACCCGCCATCCCATTACTGGGTATACACCCAAAGGACTATAAATCGTCCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCATTATTCACAATAGCAAAGACTTGTGAACCAACCCAAATGTCCATCAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAATGGTGAGTTAATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAAGTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTTGGGGGAGGGGGCAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCACACCAGCATGGCACATGTATACGTATGTAACTAACCCACACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAATTAAAAAAAAAAAACAATATGAGATCATGTCCTTTGTAGCAGCATGAATGGAGCTGGAGACCATTATCCTCAGCAAATTAACCACAGGAACAGGAAACGAAATTGCACTTGTTCTCACTTACAAGTGGGAGCTAAACATTCAGTATACATGAACACAAAGAAGGGAACAATAGACACTGTGGCCTTCTTGAGGATGTAGTGTTGTAGGAAGGAGAGGATTAAATAACTACCTTTGGGGTACTAAGCTCATTACCTGGGTAATGAAATTATCTTTATACAAAACCCCTATGATGTGCAATTTACCCATATAAAAAAACCCACACATGTACTTCCTGAACCGAAAAGTTGGAAAAATAAAATAAATAAAATAAAATAAAATAAGTCATTAACTAGTTGAGCAAATAAAACACTGGAAGATAGAATACCTGTTTAATACATGCACATATTTAAAGCCAATACATATTGGGTACTACAGGTTACATTCAGAATTATTTCAGTATGTTGGCTCATGCCTTGCCCTCCTCACCAGAAACCAGAAGAAAGAATGTGATTTTATTATGTGTTAATAATTAAGCACAGCCAGGATCATAAACTTTTAAACAGGCTTTTTAAAAACATAGCCATGATCAACTTTTTCTTGTTTAAAGGAAATTTATATGAAAAGGAAGGATTGTTTATTTAGTTGATAAAATTACAACAATGAAATACTCAGAGATGTTTTAAAAACTAAAGACAGTTATATGTAAATAAATGAGTATTTCTTCCATAAAAGAGGTAAAAAATCTCTACAAGGAATACTAGAAAATAAAAAACTGGTAAAAGAAATTGAAGAGAACAGAAACTAATGGAAAGAAATTTTACGCTTATGTTATGAAAGAATTAATTTTGTTAAAATGATCCTACTGCCCCAAAGGAATCTGCATATTCAATGTAACCTCTGTCAAAATATCAATGTCACTTTCACAGAAATAGAAAAAACAATCCTAAAATATATATGAAACCAAAAAAAGAGACAGAATAGCCAAAGCAATTCTTAGCAAAAAGAAGAAAGCTGGAGGCATCATGCTACCTGATCTCTAAATATATTATAAGGCTTTAGTGACCAAAACAACATAGTATTAGCATAAAAAACAGACACATAAACCAGTGGAAACAAAACAGATAACCCAGAAATAAATGCACATATTTACAGCCAACTGATCTTCAATGAAGTCCTTAAGAACATACATTAAGGAAAGGACACTTTTTGAATAAATAGTGCTCCATATGATTGAAATGTGGAAGAAAGAAACTGAACCCCACACTCTTACTAATATGCAAAAATCAACTCAAGATTGATTAAAGACTTAAACATAAAACGTGACACTAAAACTACTGAAAGAAAACACATGGAGAAAGCTATTCAGACATTGGTCTAGGCAAACATTTTATAGCAAACGCCTCAACACCACAGGAAACAAAAACAAAAATAGACAAATGAGACTATATTAAACTAAAACCTTTGGTACAGGAAAAGAAACAGTCAACAGAGTGAAGGAACAACCTCTTGAATGGGAGAAAATATTTGCAAACTATTCATCCAACAGGGGACTAATATCGAGAATATACAAGGAACTCAAACAACTCAACAGTAAAAATAATAATAATTAATAATCCATTAAAAATAAACAAACACACAAAAAGACATTTCTCAAACTAAGACATATAGATGCTGACAGGTATATGAAACCTGCCCAACATCCTAATCACCAGAGAAATGCAAATTTAAACCATAAGAAGATATCATCTGTAGTTAGAATGGCTATTATTAAAAAGACAAAAATAACAGGTGTTGGTGAAGATATAGAGAAAAGCAATTCTTTACAGTTGATGGAATGTAAACTGGTACCACTATGGAAAAAGAGTATGGAGATTTTTTCAAAAAACTAAAAATAGTACTACTATGTGATTTAGCAATCCCACTCCTGGGTGTCTATCCAAGGGAAAAATAATCAATATATCAAAGGGATACATAAACTCTTATGTTTACTGCAGAATTACTCACAATAACAAAGATAAGGAATCAACCTAAGTGCGTGTCAATGGATGAATGGAAAAGGAAAATATGGTGTATATATACATGATGGAATAGCATTTGGACATTAAAAAAAAGAATGAAATTATGTCATTTGCAGCAAAATGGGTGGAACTAGAGATCATTAGGTTAAGTGAAACAAGCCAAGTACAGAAAGAAACATATTGCATGTTCTCACTCATATGTCAAGCCAAAAAAGTTTATTTCATAGAGGTAAAGAGGAGAAGGATAGGTACCCTCCTGGAGAGGGTGTATTGTGGTGAGGAGGGTAGATAAAGAGAGGTCGGTTAATAGGTACAAACATACAGTTAGATAGAAGGAATAAGTTTTTTGGGTTTTTGTTTTTGTTGTTGTTGTTGTTTTTAACTCAGTCTCACTCTGTCACCCAGGCTGAAGTGCAGTCATGTGATCTTGGCTCACTGCAACCTCCCAGGTTCAAGTGATTCTCATGCCTCAGCCTCCAGAGTAGTAAATTTTTGTATTTTTTAGTAGACATGGGGTTTCACCATGTTGGCCAGGCTGGTGTCGAACTCCTGTCTCCAGTGATCCACCTGCCTCAGCATCCCAAAGTGCTGAGATTACAGGCATGAGCCACTGTGCCCACCCATAAGGAATAACTTCTATAAGCTCAGAAAGCAAAGTGGGGTAACTATAGTTAAAACTATGTATTGCATTTTTCAAGATAGCTAAAAGAAACAGCTGAAATGTACCTGATATGGCTTGGATCTATGTTCCCACCAAATCTCATGTCAAATTTTAATCTCCAGAGTTGAAGACGGGACTGGTGGGAGGTGATGTAATCATGGGGAAAGTTTCCCATGAATGGTTTAGCACCATCTCCCTGGTGGTATTCTTGTTGGTAGTGAGTGAGTCCTCATAAGATCTGTTGTTTAACACAAAAGTGTGGGCAACTCCCCACTCTTTCTCTTTTGCTTCTGCTCCTGCCATGTAAGACATGTCTTCTTCCCCTTCACCTTTCACCATGATTGGAAGCTTCCTGAGGCCTCCTAGGAGCAGAAGCCACAATGCTTTCCTGCAGAACTCTGAGTCAATTAAATCTCCTTCCTTATAAATTACTCAGGTATTCCTTTACAGCCATTTGAGAATGAACTAATACAGAAAATTGGTACTGAGTAGTGGGACATGGTATAAAGATACCTGACAATGTGAAAGCAGCTTTGGAACTGGGCAACAGGAAGAGGTTGGAAGAGTATAGAGGGCTCAGAAGAAGACAGGAAGATGAGGGAGGGAAATGTTCAAACTTCCTAGAGACTTGTTGAATTGTTGTGACCGAAATGCTGATAGTGATTTGTATACAGAAGGCCAGGCTGATGAGGTCTCAGACAGAGTTGAGAAACTTATTAGGAACTGGAGCAAAAGCACTTTTGTTATACCTTAACAAAGAATATGGCTGCATTGTTCCCCTGATCAAGGGATCTATGGAACTTTGAAATTGAGAGTGATGACTTAAGGTATCTGGAGGAAGATATTTCCAAGCAGAAAAGCATTCAAGATGTGGCCTGGCTACATCCTATGGTCATATGCATGAGCAAAGAAATAACCTGAAGTTGGAACTTATACATTTAAAGAGAAGCAGAGCATATAAGTTTGGAAAATTTGCAACCTGTGGTAGAAAAGAAAATCCCATTTTCAGGGAAGGAATTCAAGCAGGATGCAGAAATTTACATAAGTAAAAAGGAGCCAAGTACTAATAGCCAAGACAATGGGGAAAGGCCTCGAAGGCATTTCAGAGACCTTCACAGCAGCCCCTTTATCACAGGCATAGAGGTTTAGGAGGACTGAATTATTTCCTGGGCCAGACCGAAGAACTTCCTGCACTGTGCTGCCTCAGGACACTGCTCCCTGCATCCCAGCCACTCCAGCTCCAGCCATAGCTCAAAGGAGCTCAGGTACAGCTTGGGCTGCTGCTTCAGAGGGAACATACCATAAGTCGTGGTGTCATCTACGTGGTCTTAAGCCTGTGGCTGCACAGAGTGCAAGAATTAAGGCTCGAGAGCCTCTGCCTAGAATTCAGAGGATGTACAGAAAACCCAGGGTATCAAGGCAGAAGCCTGTTGCAGAGTTGGAGCCCTCAATGAGAAACTGCTAGGACAATGCAGAAGGAAAATGTAGGGTTGGAGCTCCCACACACAGTCCCCACTAGGGCACTGCCTAGTGAAGCTGTGAGAAGAGGGCCACCACCCTCCAGATTCCAGAATGATAGATCCACCAACAGCTCGTACCCTGCACCTGGAAATGCCACAGGCACTCAACAACAGCCCATGAAAGCACGTGAGGGGGCTGAATCCTGCAAATCCATAGGGTGAGTTGCCCAAGGCCTTGGAAGCCCACCCATTGTACCTGTGTGTCCTGGATTGGAGACATGGAGTCAAAAAATTATTTTGAATCTTTAAAATTTAATGACTGCCCTTATGGGGCATAGCTGAACAAAAAGCAGCAGAAACTTCTGCAGACTTAAACGTCCATGTCTGACAGTTCTGAACAGAGCAGTGGTTCTCCCAGCACAAAGATTGAGCTCTGAGAACGGACAGACTGCCTCCTCAAGTGGGTCCCTGATCCCATGTAGCCTAACTGGGAGACACCTCCCAGTAGGGGTCGACTGACACCTCATACAGCTGGGTGCCCGTCTGAGATGAAGCCTCCAGAGGAATGACCAGGCAGCAATATTTGCTGTTCTGCAGCCTCCTCTGGTGATACCCAGGCAAACAGGGTCTGGAGTGGACTTCCAGCAAACTCCAACAGACCTGCAGCTAAGGGACCGGACTGTTAGAAGGAAAACTAACAAACAGAAAGGAATAGCATCAACATCAACAAAAAGGACAACCACATCAAAACCCCATCTGTAGGTCACCATCATCAAAGACCAAAGGTAGATAAAACCACAAAGATGGAGAGAAACCAGAGCAGAAAAGCTGAAAATTCTAAAAACCAGAGTGCCTCTTCTCCAAAGGATCGCAGCTCTTCACCAGCAATGGAACAAAGCTAGATGGAGAATGACTTTGATGAGTTGACAGAAGTAGGCTTCAGAAGGTCAGTAATAACAAACTTCTCCGAGCTAAAGAAGGATGTTCAAACCCATCACAAGGAAGCTAAAAACCTTGAAAAAAGATTAGATGAATGGCTAACTAGAATAAACAGCATAGAGAGGACCTTAAATGGCCTGGTAGAGCTGAAAACCATGGCACGAGAACTACGTGATGCATGCACAAGCTTCAGTAGCTGATTCGATCAAGTGGGAGAAAGGGTATCAGTGACTGAAGATCAAATTAATGAAATGAAGTGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTTTGATTGGTATACTCCAGATTCCAGAATGGTAGATCCACCAACAGCTTGAAAGTGACGGGGAGAATGGGACCAAGTTGGAAAACACTCTTTAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAAATTCAGGGAATACAGAGAATGCCATAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGTGGATCTCTCCACAGAAACTCTACAAGCAGAAGAGAGTGGGGGTCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGACTTTGTCACCACCAGGCCTGCCTTACAAGAGCTCCTGAAGGAAGCACTAAACACTGAATGGAACAACTGGTACCAGCCACTGAAAAAACATGCCAAATTGTAAAGACCATTGATGCTAGAAAGAAACTGCATCAACTAATAGACAAAATAACCAGCTAACATCATAATGACAGGATCAAATTCATACATAACAATATTAACCTTAAGTGTAAATGGGCTAAATGCCCCAGTTAAAACACACAGACTGGCAAATTGAATAAAGAGTCAAGATCCATCAGTGTGCTGTATTCAGGGAACCCATCTCATGTGCAGAGACACACACAGGCTAAAATAAAGAGATGAGGCGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAAACAGAGATTGCAGTCCTAATCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACTTAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATGTATGCACCCAATACAGGCACCAAGATTCATAAACAAGTGTTTAGAGACCTACAAAGAGACTTAAGACTCCCACACAATAATAATGGGAGGCTTTAACACCCCACTGTCAATATTAGACAGATCAAGGAGATAGAAGGTTAACAAGGATATCCAGGACTTGAACTCAGCTCTGCACCAACCAGGCCTAATAGACTTCTACAGAACTCTCCACAGAATATACATTCTTCTCAGCACCACATCACACTTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATATAAAAGAACAGAAATCGCAGCACAAATGGTCTCTCAGACCACAGTACAATCAAATTAGAAATCAGGATTAAGAAAATCACTCAAAACTGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTAAATAACAAAATGAAGGCAGAAATAAACATGTTCTTTGAAACCAATGAGCACAAAGACAAAACGCACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAAATTTGTAGCACTAAATGCCCACAAGAGAAAGCAGGAAATATCAAAAATGGACACCCTAACACCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACACATTCAAAAGGTAGCAGAGGCAAGAAATAACTAAGATGAAAGCAGAACTGAAGGAGATGAGAAGATACAAAAAACCCTTCAAAAAATCAATGAATCCAGGACCTAGTTTTTTAAAAAGATCAACAAAATTGATAGACCACTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACGCAATAAAAAATGATAAAGGAGATATCACCACTTATCGAACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATAAACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCCCTGAATAGACTAAGAACAGGCTCTGAAATTGAGGCACTAATTAATAGCCTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCCAAATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAAGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACAATAAAAAAAGAGGATGTTAGACCAATATCCCTGATGAACATCAGTGCAAAAATCCCCAATAAATACTGGCAAACTGAATCCAGCAGCACATCAAAAAGCTTATCCACCACGATCAAATCGGCTTCATCCCTGGGATGCAAGACTGGTTCAACATATGCAAATCAATAAACGTAATCCATCACATAAACAGAACCAATGACAAAAACGACATGATTTTCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAGCCCTTCATGCTAAAAAACTCTCAATAAACTAGGTATTGATGGAACATGTCTCAAAATAATAAAAGCTATTTATGACAAACCCATAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATCCCCTTTGAAAACCTGCACAAGACAGGGATGCCCTCTTTCACCACTCCTATTCAACATTG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7305:HG2_PB_PB10Xdip_6221:HG2_PB_SVrefine2Falcon1plusDovetail_1732:HG2_10X_SVrefine210Xhap12_8440:HG2_PB_SVrefine2PBcRplusDovetail_1641:HG2_PB_SVrefine2Falcon2Bionano_5843:HG2_PB_SVrefine2PB10Xhap12_8697;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_7305;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00266601;ClusterMaxSizeDiff=0.00246585;ClusterMaxEditDist=0.0109603;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=10125;DistBack=43388;DistForward=19650;DistMin=19650;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=2025;REFWIDENED=11:7835276-7837300;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=811.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:38:./.:1:3:1:0:./.:0:0:0:0:./.:0:5:1/1:8:719:.:9041:.
chr11	56465817	HG2_10X_SVrefine210Xhap12_8624	T	TTGGAATGGATTGAACAAAGAGGAAAAGAGTAGGAGACACAAGCAAGTGAGTAAAGAGGGCAAAAGCACAAAGATCTTGCACATCTTTGTAAGAGTCTAACTTTTACTCTGAATAAGTGGAAAAGTCATTGGATGGAGTTCTTAGAAGAGAAAACTAACATGATCTAACTGGCATTTTAACAGGACCATTTTGGCTGCCATGTGGAAAGACTCAAGTGGGATAAGAATAAAAGCAGGAAGACCAATTAGAGGCCAATCATGGCCCCATGTAGAGTGAAAACACTGGAGCTGGGAGAAACTAGTCATGTTCTAGATGCATTTTGAAGGTAGAATCTAGGAGATGTTGCTAATTAATAAGCGACAGAGTGTAAGAAAGAGAGTGGTCAAGAATAATATAAAACGACTCTCCCTAACATGGAATAATGCCATTTACTGCAGTGGAGAAGACTGAATGAGGATCAGGTTAGGGAGGATTGTTAGTAAAATTTTTTTCTTAATGATAACACTTAAGCAAATAATATAGCTCTTAGAATACAATGATAAAACAGTATTCCCTGTGAACTCAATTTTCTTAAGATGCCCAGGAGACATTAGGGAAGAAATATTAATTGGGCATTGGAATCCATGAGTCTCACTTCAGGGAGGAGGCATAGTCAGGGGAGGTAACATTGGAGTCATGTGCATATGGAAGCATTTAAAGTCATCAGATTGGATGAGATTACCAGAAACTGATGGCAGATGGAGAAGACCAGTGGTTCAAGCGCTGATTCTGGGGACACTCCAAAGTTCAAAAGTCTGTTCTGTAGCACTGAGACACATGCAGCAAGAGAAGTAGAAGCAAACCAGACAGGTATGACAACCTGAAAACCAAGTAAAGATTTTCCAGCAGAGAAGGAGTGAGAAACTATGACAAACGCTGCAGGTAGATCTAATCAGAAGAGAACTTCATCATTCGGTTTAATCATGTGAGATCATTGCAACTTGAATGGAGTAGAGGTAGCAAAAGCTCAAGTGGAACAATCTTATATTGTTCTATATTTACTCAGAAATAACACTGTTTACTAACATTGATGTTTATTAATGCTAATATTGAGAGTTGAGTGTGAACTGAGTGTTTTTCCTAGGTCCCAAGAGGAAGATCATACAAATACAAATCATGTACACTTGAATTTTAACTTATTTACCTACAAAATGACTTAGGTTAATGAGAAGTTAGTCTGTCAAGAATTGTCTTTACAGTGTAAGACAGATGTATGCTAGATATATTTTGCTCTACCCATTTCAATAGAACATTTGTAGTTCTATATGAAGAGAATCCTGAAGAGAGTGGGTAGATTTTCAAGTCATCATAAGAAATACTGTAGTATACATAAATTACATTTAAAACTGGTGTTTCAATTATTGTTATTATTGTGTTTATTATAGAATATGTGTAAAATATAGTAAATACTGTGTACTTCGTAATTTCATCATTGTATATCATTCTTCTGTACACATTTTCCCCAAAACATTGTATCTATTCTCTTTTCCCTTTATACTTTTCTTAGTATTTTCTTAGGCCTATATATAATATTATGAGATATGAATTTATAATGCTTTCATAATGTTTCAATGCATAGAAACTAGAGGAAAAATACTTTATTCTTTTTAAACTATATTTAAAAGAGGGATGCCCAGTATTTTAAAGACAAACAAGTGATACTTAAAAATAGAAATGTACACATTTAGCAAAAGAGAAAATTGACAAAAGGAAGAGGATCAAAGTATAAGAAAAATAGCAATTATAAGTACATCTTTTCTTCACTTGAACAGTCATTCCTAAAGGAAAAACATAATTAAACAACTTAAGAAATTTAGAATTGAATACATAATTGCAAAGCCTGATTGTTGCAAAATGAAGACTTTCTAAAACAAACAATTAGATTGTTGGTTCTAGACTTCACGAAACACTGCAAATGTGATCTTATGTAACATAATTCTACATATTCATGACAGTAATGCAAACTGAGCTCATTTTCTTTCCCCATAGGTGAGATTCCTTACAGCCATGCAGAGGAGCAATCATACAGTGACTGAGTTTATACTGCTGGGCTTCACCACAGACCCAGGAATGCAGCTGGGCCTCTTCGTGGTGTTCCTGGGCGTGTACTCTCTCACTGTGGTAGGAAATAGCACCCTCATCGTGTTGATCTGTAATGACTCCTGCCTCCACACACCCATGTATTTTGTCGTTGGAAATCTGTCGTTTCTGGATCTCTGGTATTCTTCTGTCTACACCCCAAAGATCCTAGTGACCTGCATCTCTGAAGACAAAAGCATCTCCTTTGCTGGCTGCCTGTGTCAGTTCTTCTTCTCTGCAGGGCTGGCCTATAGTGAGTGCTACCTGCTGGCTGCCGTGGCTTATGACCGCTACGTGGCCATCTCCAAGCCCCTGCTTTATGCTCAGGCCATGTCCATAAAGCTGTGTGCATTGCTGGTAGCAGTCTCATATTGTGGTGGCTTTATTAACTCTTCAATCATCACCAAGAAAACGTTTTCCTTTAACTTCTGCCGTGAAAACATCATTGATGACTTTTTCTGTGATTTGCTTCCCTTGGTGGAGCTGGCCTGTGGCGAGAAGGGCGGCTATAAAATTATGATGTACTTCCTGCTGGCCTCCAATGTCATCTGCCCCGCAGTGCTCATCCTGGCCTCCTACCTCTTTATCATCACCAGTGTCTTGAGGATCTCCTCCTCCAAGGGCTACCTCAAAGCCTTCTCCACATGCTCCTCCCACCTGACCTCTGTCACTTTATACTATGGCTCCATTCTCTACATCTACGCTCTCCCCAGATCTAGCTATTCTTTTGATATGGACAAAATAGTTTCTACATTTTACACTGTGGTATTCCCCATGTTGAATCTCATGATCTACAGCCTAAGGAATAAGGATGTGAAAGAGGCTCTGAAAAAACTTCTCCCATAAATCAAGATTATCTCCACCAGAGGAGAAACAAAGACGACCTTAGATGGAGTGTTGTGTATTTCAAACAGAGTTACCATTGTGCTTTATCGTGATCAGTCCCCTTCTTGACACGTGAGAGTTACAGACATGTACAATAAGAAAATTAGGAAAATTTCGGACAAAAACATCTGAATATATAAGAATTTGAATTGAATTTCCTATCTCTCTTATTAAAAACAAACATAAACCTTAAGCCCAAAACCTCTCCTATACCTTCATAAAGTGAGGAACAGCCTACCTCATTAGCCTAAGATTTGGCTAACTGATACATATAGAAGAGTATCTATATAGTTCCTAGAACTAGGAAGAATTGTGCTCAATTTTTAATATTTTCCTATGTTTAACTGGATGAAATTCATCACTTTCCATTCCCTGAACAGAATATCTTAAACATTGTTCTACATGCTTTCCCCCCACAAGAAGAATTAGCACAAAGATCCAGAGGCACCCAAGAAATAACTCAGTACAAATGAGACCCAGAAAGGCATGACCTTGCTATGCCTCTTACATAAGTTTCTTGATGAAGAAAAAATTCATCAAGATGCCATATATATGATTTTTGTAATTCACTGTATAACTCCCAGAGCTCCTCTTTATTTTACAGGGGTGAACTTACAAGGACTTTTACATTAAAATTGTGACCTTCTGAGCATCAAAGGGCAATTATCATCATTTAAAAAATAATTATTATTTTGGCTAAGTGAAACAATTTCAAAAATAAAAGTCTATGAGTACACATTGATCAACAGATATTTTATTTTTATTTTTTAATAGATATTTTATGGAGAGAATATGTATGTACAGGTGTGATTCAACAAAAGGATATTTCACTTAGCATAATGTCTTCTAGGTTTATTCACGTTGTTGTAGGTGACAGAATTACATTTCTTGTAAGGCTGATTATTATTCCATTGTGTACTATATGCCACTTTTTCTTTTATCGATTTATCTGTTGATGGGCACTTACGTTGTTTCTAATTGTTAGCTATTGTGAATAATACTGCAATGAACATGAAAGCACAGATATCTCCTCAACATACCTATATCAATTCCTGTAAGCATCTACCCAGAAGTGGAATTGTTAGATCATATGGTAATTCTATTTTTAGTTTTTGGAGAGACCTCTATATTGTTTTTCAAAATGGCTGTGCTAATGTACATTCCCATCAATGGAGTATAAGAGTTCCCTTTACTCCACATCCTGGCCAATGCTTGATAATTTTCATCTTTTTGATAATGACCATTGTAATATAATGCATAATGTATAATATACGAAGTGATATTTCATTATGATAAGTGAAATAAGCCAGGCACAGAAGAAAACATATTGAATCATCCCACTTATGAGTGGGTTCTAAAAGTTAGAACTCCTACAAGTAGAGAATACAATAGTAGTTGCCAGTGACTGGGGCAGGGTGGGTGGAGAAAGGAGAAGTGTTGATCAAAGGGTACAAAGTTTCATGTAGACAGGAGGAATAAGTTCTGGTGAACTATTGCAGGACAAGGTGACTACAGTTAACAGTAATGTATTGTGTATTTCAAAATCATTTAAAAAGTGGATCTTACATGTTCTCACCACAAAGCAGTGGTAAGTATATGAGGTGATGGACATAATAATTAGTCGAAGATGTTCAATCTACAATGTATACATGTACTGAAGCATTGTCTTTTACCCCATACATATATAAAATTATGGTTTATCAATATGAATAAAATTTAAAAAACAAAAAGATGAATATGACAAGTGGCATTTAATTTTGATTAGTTTTTCAATGTAAGACAGTACTAATGTAATTTATGTTTATAAACACAAATACTTCCTTATTTGAATTGGTATAAGCAGTAGAGAAAGAAAATGCAAGAAACTGAATTAGGCAAGTAGGCCCAGAAAATGTAGGAGTTTCACACAGAGTAGAAAGATTAAATTCACATTGGCAATCATGGACACTAACACAGTAAGTGGGTGCAAGGAATAAAATCAATACAGGTTGTAACACACAGTAATGCAGCCGAAACAGAGTTCAACAGTGTAATTCTAAGATGCCCGACCTAGGTAATGTTCTGAAAAGGAACAGTATTTATGCCAACTCAGTCTTCTGGTTTTCTAAAATACGTGTTCTATTTCCCACTAATGATATTAAAATTCCTATAAAATACATTCTTTTGAAGTAATCTTAACTGACTCAATTATTATATTACAGTGGCAGTAAATCAATTATGTTATGTTGCTTGACTGAAACTAGGAAACACATCATTCCAGAGGGAAGCATCAATTACAGAAAGCAAAACTGATGTGACTCATCTATTTTTAAAACACCGTGGTATCACAAACCCTGACATGTAACTATAGAAGAAAGTCTCAAACTACTTGAGGACTTCTATTCTAATATTTTTAGGGGAGGCTCCCAAAATTCATTCTTCAAATAAGAATAAGAATATGCCCATATATTATAAACGTGGCTGGCCTATGTACATATTCACATTATTTGATGCTGGAAGTTAGCTCTAGAATCATGTCTAAGAAATATTACAGAGACCTTAGTGAAAAGATAAAGCACAGCTAATAATAATCTTAGGAAGACATAAAAATAAATAAGAACATAAAATATAATTAAGCATGTGGCATTGATGATTTATAACATAATTTAGAAATAAGTTTTAGTGTAAATCTAGCAGTCAGTTTTCCACTCACTTTTGGAAATGTTTCATCTGCAACTTATAGATTCGAAGAATTCAGAAAAATCTTTCATATTAATTTGAAATTAAAATACAAATTCCTAAGGGAATTTGATACTGAATTCAAAAATGAAGTTTAGATTCTTGAGGTAAAGTGGTTTGTAAGATTTTTCCTCTAGATATATAAGTTTTAATAAATAAAACATTTCTAAAAGTACAAAAGTGTATGGACTCTTCCTTACAAAAAAAAATCTCTTAAACTTAATGTTCTTTGAAAAATGCACAGCTCTTAGTGGTTGCATTAGTCTGGATTCTTCAGAGAAGTAGAAGCAATAGAATGTGTGCAAATTTTGTGCGCATGTGTGTATGTGTTTGTGTATACATATAAGGCATATATGTGGCACATATGTGTGTGTGTGCATATGTGTGTGTGTGTGTATACACACACAGAGAGATTAATTTTGAAGCCTGTGAAGTCTAAATCTGCAGTGTGGCCAAGGATACTTGAGACCAAGGAGAGCTGTTGGTGCACTTTCAGGCTGGCAGCTTAGAGGCCAAGGAGGTCAATGGTGCAGATTAAATCCAGGAGCAGAGTGCCAGAGAATTCCCTCTTGCTTAGGGAAGTCCATTTTTCTTCTTCTTTTTTCTATTTTGGCCATTAACTGATTGGTTTTCTTATTTAAAATTCCCTTGTTAGTAGTTTTTCAACATGTTATACTGAAGGTTTTCATAGCGTGCATCTCCCACTTGGAAAGACTAAATAGTGCAGAGACATACTCTGAGCTTTTTTCCAAGAAGCAACACAGGAACTTAACAGAAAAAATGAAAGAAACTACAGACCCTTTAAAAGAAGTGGTGGCTGCAGCCTATACCATGAGCCAGGTGGAAAACTGTGAGACTTCAGCACAAGGGTGGCAGGAACTGCATCAGGTGTATACACTCCCACTGGGGATCCTGGAAATCCAGGCCACGGAGGAAGGCCCTAACCCTACCCAGCACTGGAGCTGACATACTGAGCAGTGAGGAGTATATGAGAAGGAACAGCATCAGGACATGCTTTGCATGCCCTCCCAGTCACCAGTGGGGATGGCGGAAGCCATTCCTGATCCTATGGCACAGAGGACTTTGCAGAAGTCAGCCAGCTAACTCACATGGCACTCACTGGTTAAGAGAAGCTCCCAATTGAGATTTGTGATATAATCCTGAGTGGGGATAAAACTCCTTGTCCAGAACTGAGGCAGAAGTAGAAAGTTTGCTAAAGCCTTGGGCACAGGAGCTGGGTGTCCCTGCTTCATGGGACGAATGGGTAGGACATGGCTTGAAATCCGGGGTTTGTCTCCCTCAGGAAGGTAAATGGCCTGGGGTCATTTTGAGTTCTGAGCACAGGCTGCCTGTAAACCAGGTAGCTGCTGCAGATGGAGTACTGCAGGTGTGAGGCCTGTCTTGCCACATGTGTGGGAGCTGCATGGGGCTTACTGCTGCCTGCTACTCCCCACTCCCCATGTGGACTCTTCCATTCAGCAGAAGCAGCTGTACTCCTCACTGAAGCATCACCCTAGTGGCCATGGAACTGCCATCCAATCCTCATTGGGGTGGCTGCTTGTGCCCACACATGGGCAGCCAGAGTGCAGACTTGCCCAACCCAGCCCTCATACAGCTTCGCCTTCTAACCAACCTCATAACCGAACACAAAGAACAGAGGCTTTTGGGATCTCTATGGCCATGCCCATTGTCTGAAAGACCAGAGTACCTTCTCTGGGTAACATAAGGCAAGCACAAATCCCACAGCTATCACCGCAGCTGGTGCACAACCTCCTATGTGGAGGCCAATCAACACAGTACATTATGGCATCTGCAGGCAGAGCAACACAGTACCCAGGAAGGATAAAAGTTTGTGTAACCTCAGCTACCAATATTGCCTGCATCACCCTGGCTAACCAGGAGGTCTTCCATCTGCCCATGTGACCTGTTCATTTTTACTCCAACTTTCTGAGAAAGCCAACACACTAAGGCTATTTATAACCAAGTGAATCTTACAGAGTCTACATCATTTCCCTACCACCCCATCAGATCTTGTGCTGATACCTGCTTTTGGGAGACTTGAAGGCTGGTCACATTGCTGGATAACTTGTAGACATTCCCCAGGACCAGCCTGGAGTTCTGGGGAATCTTGGGGATTCTGGGGATCCCAATCTTGGGAGCTCTGGGGAATCACTTGCAGACATTCCTTAGAGCACCCCCACTGGGTGTCTAAACCCAGAGAAGAAGCAGAATTCACAGTAGTCTGTCCCTGAGGGACTCCTACTTTTAGGGAAACAGGAAGTACACTACCTCAAGAGAGAAACCTGTGAGACAAAAGAATCCAGATGGCAGGCCTTGGGTCTCAGACTTTCTACTTGTGATAAATTTCAGCAGAGGGACGAGTGCAGTGCTTGGCTCAGTAGGGAAAGTCTGTAGCTCTACCTCAACAATCAGGCAGCCCTGGTGATTGTGAAGGGTCTGGAGAAGGATACCTCTTCTCCCTTTCACCTACCATTGTGGACACAGTTGGGGCTTCTCCCAAAGGAGCTCTGTGTGGGTGCACCTGTAGCATTTCTGGAACACTTCAGAGTAATTTCATCCCCACAGGAGGAGTGCCCTCCAGGTCAGACTTGACTGAGGGGGAGAGTCACAATCCCTCTCTGCATGCAACATCAGCATTCCTGCAGATGAAAAGAGGTGCTGGTCTGATCTGAATAACTGGAACAATAGGTACAGTGTGTGACTCACGTGACTGGGAGGTGGATCAATTTCCTGCTGGCCTGATAGGGGAGCTGAGGTGGCTTCCTCTCTACCCTCTCTAAAGACCTCACTGCATTTCACTGACGGCTCCCCCAGCTGCCTCTGTCAAAGCTGGGACCTCTGCCTATCATTGGTTATTGCATTTACTCCCACACTTAACTATAGCTGGTTTTTACCCATGAACACCTCCTGCTGGCCTGAAGCCTGAACTGTCTGATCCAGTGAATAAAATACTGGGGGAATAAATAAAGTGCATATTACTGGGGAACATGATAAGCTTCATGAGACCTCTGCCATTCTATCTCCACAGGAGACAGTGCACCTGCTCACACACTGAGAACATTGCTACTACAATCAGCATCTGAGAAAGCCACTATGCAAAGACTCTCTATAACCAAGGAAATTATGGAGTCTTCAACCCTTAAAACTTTCAGAGCTGAACTAAATTGCAATAAACTATAAACAGTAAAGTCACATCCTCAAGGGGTAAAAAAAACTTTAAAAAAAACATAGTCAAATCAAAAATAAATTTAAAAATAATCAGAAGAAATAGTCTACTCAAATGAGAAGAAACCAGAAAAATAATTCTGATAATGTGAAAAAACAGGGTTCTATAACACTTGCAAAAATCACACAAGCTCTCTAGCAATGGATCCAAATCAAGATGAAATTTTTGACATACCAGATAAAGAATCCAAAAAGTTGATTATTAAAGCTACTCAAGGATATACAAGAGAAAGGTGAAAGCCAGCATAAAGAAATTTTTAAAACAATTAAGGATACAAATGAAAAATTTTCTAAACAGGTAGGTAATTTCGAAGAAAACAATCAGAACTGTTGGAAATGAAAGACATTTAATGAATTACAAAATGCAGCAGAAATTTTTAACAATAGACTAGACAGAGTAGAAAGAAGAATTTCAGAAATTGAAGACAAGGATTTGAATTAACCCAGTCAGACAAAACTAAAAAAACAAGAAAAAAAAGAAATCAAAAAGTCCCTAAGAAATACGAGATTATATAAAACATCCAAACCTAAAAATAATTTGTGTTCCTGAATGAGAAGGAAAGGCAAGAAGTTTGGAAAATTTACTTAAGGGAATAATGGAGGAAAATTTCCCTGGCCTTGCAAGAGATTTAGACATCCAAATACAAGAAGTTCAAAGAACTCGTTGGGGATTCATTGCAAAATGGTCATCAAGGCACATTGTCATCATGCTATCTAAAATCAACAAAACGGAATGAATTCTAACAGTGGTGAGAAAAAAGCATCAAGTAACCAATGAAACAAACCTATCAGACTAACAGCAGACTTCACACTAGAAACCTTATATGCCAGAAGAGATTGGGGTCCTATCTATAGCCTCCATAAAAAGAATAATAGTCAGCCAAGAATTTTTTTTATTCAGCAAAACTAAGTTTCATAAATGACAGAGAAGTAAAGTCTTTCTCAGATAAACAAAGGCTGAGGAAATTTGTCACTGCTAGACTAGAAATGCTAAAAGGATTTCTAAATCTTGAAACAAAAGGTTGATATGCACCAGAATAGAACGTCTTAAAATTCACAGGTCCTTTAAAACAGTAACACAATAAAGAAAACAAAGTCACTAGATAGCAATCAACATGATAACTGGAACAGTACCTCACATCTCAATATTAACACTGAATAGCCGGGCTCAGTGGCTCAATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGCGGTCAAGAGATCAAGACCATCCTGGCCAACATGGTGAAACCCCATCTTTATTAAAAATATAATAATTAGCTGGGTGTGGTGGCGGGTACCTGTATTCCCAGCTACTCAGGAAGCTGAGGCAGGAAAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCATTGCACTCCAGCTTGGGGGACAGAGTGAGATGCCATCTCAAAAATATATATATATATATGTATATATATATATATATATACACACACACATACTGAATGTGAATATAGAATGGCAGAATAAATTTTAAAAATTCACAAACCAAATATCTACTGTTACTTTTAAACATGATCAAATTCCTGAATCATCATTAGAGTGAGAGAATATTAGAATCAGAAGATGTTGTGTCCAGCAGTTTTCAAATTTTTCTTCAGGAAATCCCTTGGAGTTCCACTGGATCCATGTTTTCAAAGATTTTGCATCATCCAAAAACATTGTTCCTATTTTGTATGAGGTAATCAATTTAAAACAAACAGCCCACATCACCACAGAATAAAACTACAAATCAATAGTATTTAACATTAACATGATACATGTTTTCCATCAAATGCAGATGGAAAGACCATTTTCTAGTGAAGGGAGAAGAAAAGAAGCTAAACTAATGAGATGTAATATGAGCAGAACCACAAGAGGACAATGAAGTAGGAGAGGGACATAAGAATTTCAGGGAAGTGGATTGCAATATGGTAATCAGGGAACATCTTTAGGGGGTAATAATAGAAGCCATTAAGAACTGAGAAATGTGAGGGAACTGGCTATAAAGACTTCTAAGGGGAAGAGCATTGCAACAATGGGTGGAACGAAGACAAAGCATTGATCATTCCATGTTTATTCTAAAAATTCAAAGGCAGATAGCATGCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7492:HG2_PB_PB10Xdip_5976:HG4_PB_SVrefine2PBcRDovetail_6205:HG4_PB_SVrefine2Falcon1Dovetail_7523:HG2_PB_SVrefine2Falcon1plusDovetail_1919:HG2_PB_SVrefine2PBcRplusDovetail_1828:HG2_PB_SVrefine2PB10Xhap12_8891:HG2_PB_SVrefine2Falcon2Bionano_6007:HG2_10X_SVrefine210Xhap12_8624:HG2_Ill_SVrefine2DISCOVARplusDovetail_2135:HG3_PB_SVrefine2PBcRDovetail_5766:HG4_Ill_SVrefine2DISCOVARDovetail_8741;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8624:HG2_PB_SVrefine2Falcon2Bionano_6007;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00387824;ClusterMaxSizeDiff=0.00387824;ClusterMaxEditDist=0.0486462;PBcalls=9;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=11108;DistBack=22023;DistForward=592;DistMin=592;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=9997;REFWIDENED=11:56465818-56475814;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=893.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:0:10:0:17:./.:0:0:0:0:./.:0:0:1/1:0:499:.:.:.
chr11	64362036	HG2_PB_SVrefine2PBcRplusDovetail_1863	G	GTGGATTGGATGAGTGGATGGGTGAGTTGGTGGATAGATGGATTGGATTGTATAGATGAATTGAATGGATGGTTGAATGGATGGATAGATGGATGGATGGTTGGAATAGATGGATGGACGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGACGGACAGACGGACGGACGGTTGGATGGATGGATGGATGGATGGATGAATGGATAGTTGGAATAAATGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1955:HG2_PB_SVrefine2PB10Xhap12_8925:HG3_PB_SVrefine2PBcRDovetail_5797:HG3_PB_SVrefine2Falcon1Dovetail_7526:HG4_PB_SVrefine2Falcon1Dovetail_7559:HG2_PB_SVrefine2PBcRplusDovetail_1863:HG2_PB_SVrefine2Falcon2Bionano_6027;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1955:HG2_PB_SVrefine2PBcRplusDovetail_1863:HG2_PB_SVrefine2Falcon2Bionano_6027;NumExactMatchSVs=3;ClusterMaxShiftDist=0.216216;ClusterMaxSizeDiff=0.216216;ClusterMaxEditDist=0.222222;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=230;DistBack=12181;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=529;REFWIDENED=11:64362037-64362565;PctSeqSimilarity=0.8269;PctSizeSimilarity=0.1913;PctRecOverlap=0;SizeDiff=186;StartDistance=-405;EndDistance=-405;GTMatch=1;TruScore=33;MatchId=914.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:34:./.:7:16:8:12:./.:3:27:1:31:./.:5:0:./.:.:.:.:.:.
chr11	68877872	HG2_PB_SVrefine2Falcon2Bionano_6059	A	ACCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTAAATATCCATCCATTCATCCATCCATCCATCCATCCATCTGTCCATCTAAACATCCATCCATCCATCCATCCGTCCGTCTGCCCGTCCGTCCATCCATCCATCCAAACATCCATCCATCCATCCATCCAAACATCCATCCATTCATCCATCCATCCATCCAAACATCCATCTATTCATCCAAACATCCATCCATCCATCTAAACATCCATCTATTCATCCATCCATTCATTCATCCAAACATCGATCCATCCATCCATTCATCCATCCAAACATCCACCCGTCCATCCAAACATTCATCCAAACATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTAAACATTTATCCATCCATCCAAACATCCATCCATCCAACCATTCAAACACCCATCCATCCAACCATCCAAACACCCATCTATTCATCCATCCATTCATCCATCCATCCATCCAAACATCTGTCCATCCATCCATCCATCCATCCATCCATCCATCCGTCTGTCCATCCATCCATCCATCCAAGCATTTATTCATCCATCCAAACATCCATCCTCCATCCAGACATCCATCTGTTCATCCATCCATCCATCCATCCATCCATCCATCCAAACATCCATCTGTCCAGACATCCATCTATTCATTCAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6264:HG3_PB_SVrefine2Falcon1Dovetail_7561:HG2_PB_SVrefine2Falcon1plusDovetail_1989:HG2_PB_HySA_22583:HG3_PB_pbsv_12138:HG4_PB_pbsv_12436:HG2_PB_pbsv_12449:HG2_PB_SVrefine2PBcRplusDovetail_1895:HG2_PB_SVrefine2Falcon2Bionano_6059:HG2_PB_SVrefine2PB10Xhap12_8961:HG3_PB_SVrefine2PBcRDovetail_5830:HG4_PB_SVrefine2Falcon1Dovetail_7593;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6059:HG2_PB_SVrefine2PBcRplusDovetail_1895;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0817741;ClusterMaxSizeDiff=0.0790021;ClusterMaxEditDist=0.287278;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=699;DistBack=2557;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=668;REFWIDENED=11:68877865-68878532;PctSeqSimilarity=0.9449;PctSizeSimilarity=0.9536;PctRecOverlap=0.2101;SizeDiff=-34;StartDistance=-562;EndDistance=-562;GTMatch=0;TruScore=70;MatchId=932.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:2:12:0:6:1/1:0:231:1:205:1/1:0:23:./.:3:56:.:5819:.
chr11	69628592	HG2_Ill_GATKHC_19904	G	GTGGATGGCTGGTTGGCTGGATGGATGGATGGGTGGATGGGTGGGTGGGTGGATGGATGGATGGATGGATGGATGGA	20	PASS	ClusterIDs=HG2_Ill_GATKHC_19904:HG2_PB_PB10Xdip_6176:HG3_Ill_GATKHCSBGrefine_8259;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_GATKHC_19904:HG3_Ill_GATKHCSBGrefine_8259;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0263158;ClusterMaxSizeDiff=0.0263158;ClusterMaxEditDist=0.0263158;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=76;DistBack=207;DistForward=1176;DistMin=207;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=441;REFWIDENED=11:69628307-69628747;PctSeqSimilarity=0.8945;PctSizeSimilarity=0.5263;PctRecOverlap=0;SizeDiff=36;StartDistance=178;EndDistance=178;GTMatch=0;TruScore=47;MatchId=938.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:21:./.:16:4:16:18:./.:174:201:170:62:0/0:9:1:./.:.:.:.:.:.
chr11	70801538	HG2_PB_SVrefine2PBcRplusDovetail_1908	T	TTCAGCCAGGGTTCTCCAGAGACACAGACCCACGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATGTACACACACTTACAAATACATATATATTTACACATATATTTGTAATATGTGTCTATGTATATATTTGTGTATGTGTGTACTTTACGTGTGTATGTGTACACATGCAAAGAGATTTATTTTAAGGGATTGGTTTAAATGATTGTGGAGGCTGACAAGTCCAAAATCCATAGGACAGGGCAGCAGGCTGGAAACTCAGGCAGGAGTTGATGCTGCAGTCTTAGGGCAGAATTCCTTCTTCTCTGAGAAACTTCAGGTTTTGCTCTTAAGGCCTCCAACAAATCGGATGGGGCCCACCCACATCATGGAGGGTATACCTTTACTTAAAGTCAAGTGACTGTTGATGTTAATCCCATCTACAGAACACCTTCGTGACGACCCCTACATTAGCATCTGAGTAGATAACCGGGTGCTAGAGTCTAGTCAAGCTGACATATCAAACTACCCATCACATGCAGCCCATTTCTGCCTCTCTCCCTTGCTGTACCCCTGCTTGGCTTGGGTCCTCTACTGTTTAGACTTCTATCCATTCTGTTTCTCTTTGTCTTCAGAATCAGGAAGTTCGCTATCTTGGACTGAGCAATCCAAAAAGCAAAGGGTCCCTGATGATGTTCATTTCACACTTGGTTGCAAGAGAAGTGCCTGTCACAAAGAAGCCTCTTCCTCACCGCAGATCCCAGAGCCCTGAACTGGAAGTCAGAAGGCCTGGGGACCGCTGACTTATCACTAATTTTGGAATTCTTACCATCTGTCTCTCTAGATTTCCATTTCTCCTAAAAACTGGGGATAAAAAAGCCAACCTCATTGGGTTGCTGAACATTAAACAAGAACATATAGAAAAGCATTTGTGAACTTTAAAACTCTGTGCAAATGGAAAATTCATCACTATCATCATCACTATCATTTTCAGTATCTTTTTTTTTTTTTTTTTTGAGATAGAGTTTTGCTCTTGTCACCCTGGCTGTAGTGCAATGGCATGATCCTGGCTCACCACAACCGCTGCCTCCCAGGTTCAAGCTATTCTCCTGCCCCAGCCTCCCGAGTAGCTGAGATTACAGGCATGTGCCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTTCATATTGGTCAGGCTGGTCTCGAACTCCCGACCTCAGGTGATCTGCTCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCCATTTTCAGTATCTTAATCACCATAATCATGGCCATCAGCAAAACCATCACTATTATCACCATCACCATCAACATTACCATCATCATGACCACCACCATCATCATCAACATGACCATCATGAACACCATGACCACTATCAACATTACCATCATCATAACTACCATCACAACCATCAACATTACCATCATAAGGACCACCACCATCACCATCAACAGGACCATCATGAACACCATGACCACTATCAACACTACCATCACGATAATTACCATCACAACCATCAACGTCACCATCATCATGACCACCATGATCACCATCAACATGACCATCATCATGACCACCACCACTACCACTGACATCACCATCATTATCATCATTATCAATATCACCATAACACCATCATTATCACATCATCACCATCATTCTTCAACATACACCCAAAATGTTTAAGTGCTTCATCTCTACCTTAGATAAATCCACTTCTGTCCGTCTTCTGATTCTCAAACCAGAATAAACATTAGAATCCCTGGGGAAATTAGGAGAACACACAGCTCTGGTCCCTGCCCCCAAGAGTTTCTGATCCAGTGGGACTGGGGTGAATCCTGAGAATCTGCCTTTCTCTCAAGTTCCTAGGTCTTCTGATGCTGTCTGTCCAGTATTTTAAATCATTAAGCAAGGGTCGGCCAGATGAACTCCAATAATCCCAAGACTTCTTAGAAAAACCTGCCTTTGCAGCACAGTTGTACATCATCAGCACTTTCCAGATGAACATACTTGATCCCTTTTCAGTGGTGCAGCCAGCCATCATTTCTCCCACAAACTCAATATTAAATGATTCATTTTTCATAATTGGGAGGGGAAGAACAACTGTGAATGAAAAATAAAAGCTGGGGATGTTTTATGGGCAAAGATCCACAGAGTGAATCCCGTCTCTTTGTATTAATAAAACACAAGGCAGGAAGATAAGGAGGAGGAAGCTGGCTCCTGACAGGCACTGCCAGGGCCCATTCTGGGCACATAGATTGGCAGAGACCTCATTCCGCCAGTTACCTGGGCAACGTCTACAGCATACAGAGTCTGATCAGTTCAGGGACAGTGAGTATCACTTTCTTTTGGAATCATTTGTGGCACTGATTGATTGTCCTTAGCAAAATAGAGACAGATGGCACAGGGTTGGTGCTGGTGCAGTTTTGCTGCTGTGAGGGCGTACTAAGCATCCTGCCAGGTCTCACGTAATAAGGGTATCCCCATCCCAGGTGGTCACTGCACCAGTGGTGACAGGGCTGTAATGGGGACTGACAGGGAGGGGGCAGGCCACCCAAACTGACCTTTCATCCGGGTGCCATGGAAGACTCACTTCCCTGGAGTGCCGTGTGGCCGTTGTAAGTCACCGCCCAGGAGAGTCAGAAATGGCTTTTGTATTACCCAAGTGTTTGCCTTGAGTCAACGGGTATTAGCAGCTGTTTTCTGAGCAATGTAAGCAACTATGTGACTTTTTAAAATAAAGGACCAAAGAAATATATTATTTAATGCCCCAAAAAATAATGTTTAATCCAAGCCCACGAATGCACAGCTAACCCCAAAGGGGCAGACGCAGTCACACCATGAAATCAAAGAAACTCACACCCTCCTCATATTCATCACTGGAAAGAGGACATTTTCTTGGAGTGTAACTGCAATCTCTATAGACCCATCAGCAAACCAGAGACCCATTTCAACAATCTACTTTATATTAGATATTTGCAAACTGCCAGATTTAAGACTAAAATCCAGGCTCACCATGATTGAAGAGTTACATAAACTCCCTAATGGCTGATACGGTTTGGCTGTGTCCCTACCCAAATCTCATCTTGAATTGTAGTTCCCATAATCCCCACGTGTCATGGGAGGGACCCAGTGGGAGGTAATTGAATCATGGGGGTAGTTACCCCCATGCTGCTGTTCTCATGACAGCGAGTGAGTTCTCATGAGATCTGGTTTAAAAAAGGGCTTCTCCCCCTTTTGCTCGGCACTTCCCCTTAATGCCACCATGTGAAGAAGGATGTGTCTGCTTCCCCTTCCACCATGATTATAAGTTTCCTGAGGCCTCCCGAGTCATGCTGAATTGTGAGTCAATTAAACCTGTTTCCTTTATAAACTACCCAGTGTCGGGTATGCCTTCATTAACAGCATGAGAACGGTTATAATAGTGGTTATGAAACATCTGGGCCCCGTTGTTGGGCTGAACTTATTCATTTTCAACAAAACAAGCCTGTATATATTAGGAATGTCTAAGAAGAGTATTAGTAAAATCATTCGTGGAAGCCAATTCTAAACTAAAGTCCTCTCTCAGTGCAATAAGATAAACAAATCATTTCCAAATGAGGAGAATCATGGAAATGTCAATTTTCAGTTCAAGTGGATCTGACTGTGTATAACATCAAAAAGCATTTCTATAACTCGTTTAGCTAAAAAAAAAAAAATACAAGCATTTAGCTTAAAGGATTTTATTTTCACCCTAAATGGTTCTCTGGACAACTGCATCAAACGTAGATGAGTTCCATATCTGTGCAACAGAATATTACCCAGCCATGAAAAGGAGTGAAGCACAGGCGCAGGCTACAATGCAGGCGACCCTCAGCAACATGATGCTGAGTGACAGAAGCCAGACACAAAATCTCATCTATTATATGATCTCATTCATTTCACATGTTCAGAATAGGCAAATTCATGGAGATGCAAAGTCATGAGTGGTTTTCTAGGGGCTGGGGGAGGGGGAGGGGGAGTGGGGAGTGGCTGGTTAGTGGGTACAGGGTTTCCTTTTGGGAAAGGAAAGTTCCCAAAGCTAAGTTCTTAGCTAGACAATGGGGATGGTTTTGCACAGCATCATGAATATTCTTAATGCCACCAAAGTGTACACTTTAAAATGGTTCAAATGTTAAATGTGATGCTATATGTATTTTGCCACAATTTTTAAAAAAGTTTAGGACCTGGGCTTGTGCATTACACCACAGAACACCCTGGCCCATGATTGGCTGGGGTTGTTCTCCCTCCACTCTGGGACAGCGGACCCCATGGGGGTGCCAATGGAAGGCAAGCCCCCTCCTGTGTGATCCTCAGGAAGCTTGTCCCACTGGATGGAGGGGCGGCAGAGCCAGCATCTCCCAACAGCTGCACAGTTGGAAGCACTTACGTCTTTGCTGCCTTTCCGGCGCTGACTGCTGCATGCATTTCCACATTATTTGTGCCATTTGCTCTAATAGGAAGGAGCCAGTGTGAGCAAGCACACTGAGACGGGGCAGCAGCTTTGCACTAAGAGAGGGAGGCACCTAGAGCAGCCTCCGAATAAGAAAACATCCGCAACAAAACGAGCCGACCTCATGTCACACATACAAACACGACCGTGGAGACGCAGAGCCATCACCCACTGTGATCCACACACATCCTTCCTGATGCTGAGATCTCTTTTACCTGAAATGGAGTCTGGCTGTTGTAGTTTTTTAACTCCTTATTTCCGCCTCGAAACAGAAGCACTCTTGCACAGCTGTCCTGCAAATAGAAAAGGAGAAACCTGTTTGTAAAATGGTAGCACAGACATTCTCCAAAGAAATCTGTCCAGAGTCTCAAGCTCACGGGAAACCAGGGAAACAGAAGTGCACAGTTAAAAGGGAAAGCATGTTGCTTTCATCTGGCTCCTGTATGCTGTCAGGTGAGGCTCACCTGCTGCCAACTATGGCCAAACAATTTCACTTTTTAAGACTATATCCTATAGAAAGTCTTGCACATGTATATAAAATATACAATAAATGAATATCTTCAGTAAAATACAGAAAGGAAGAAAGAAGAAAGAAAAGAAAAGAAGAAAAGAAAAGAAAATCTGGAGCTAGCATACATGTTCTAAAATAGGGGAGAGTGGGGATATATTCTAGAACATTCTTCACCTAGGCAGTCTCAGGACAAAACAAGGCAGATGACTATGAACTGAGAAAAACATATCCAGGAACTTCTAAATAAAAAAGGCAAGTCCCAAAACAATAATATTGGCCATGCGCAGTAGCTCACACCTGTAATCCCAACACTTTGGGAGGTCGAGGTGGGCCAATCACCTGAGGTCAGGAGCTTGAGACCAGCCTGACCAACATGGTGAAACCCCATCTCTACAAAAATACAAAAATTAGCCGGGCATGGAGGCATGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCACCCACTGCCCTCCAGCCTGGGCAACAAGGGTAAGACTCCATCTCAAAACAAAAAACAAACAAACAAAAAAAACAAAACCCCCAATAATATTGTTTAAGTTCATTTACATTTTAAAGGCTTAAAGAGAAACTAATAAAGGCTTAAAGTCTATATTATAGAAAAGCAGGGACTATGTCTGGAAGGATATGCACCAGTTAACGGTATTTACTTTCATGGAAAGGAAAAGGATTAGGGAGAGAACAGAAGGAATCTTTTTACACTTTATTTTTATTTTTTGAGACACAGTCTTGCTCTGTTGCCGAGGCTAGAGTGCAGTGGTGCAATCTTGGCTCGCTGCAACCTTCATCTCTTGGGCTCAGGCAATTCTCCCCACCTCAGCCTCCTGAGTAGCTGGGACAACAAGCATGTGCCACCATGCCCAGCTAATTTTTTTTTTTTGGAGAGCCAGGGTCTCACTATATTGCCCAGGCTAGTCTCGAACTCCTGGTCTCAAGTGATCTGCAGGCCTCTACCTCCCAAAATGCTGGGATTATAGGCGTGAACCACCATGCCTGACCAGAGATTCTTTTTTTTTTAATATGTGGGCTTATATTATTTAATGTTGTTAAAAGCAAGCAAAACGGTTTTTTTTTTTTTTTTTTGAGACAGGGTCTCAGTCTGTCACCCAGGCTAGAGTGCAGCGGCGCGATCACAGCTCACAGCAGCCTCGACCTCCCACCTCAACCTCCTGAGTACCTGGGACTATAGGGATGCGCCACCATGCCCAGCTAATTTTTGTATTTTTTTGTAGAGACGAGGTCCCCCGTGTTGTCTAGGCTGGTCTCAAACTCCTGGGCTCAAGTGATCTGCCTGCCTCAGCCTCCCGAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCAGCCTCTTATGCATTTTCATAACAAAAATGAATCTGCATCCATCCATTGATTGGGCATCTACCATTTGCCCGTGAAGCTGATGGAGAACTTCTCGCCAACCCCTCTGAAGCTCCCAGTGAGGACTGCAGCAGCAAATAACTACTAATAAAAAGGCAGTGGTAGAATGTTGACGTAGCCAATAAAAGGCAGCAGCAGAATGTTGATGTAACCAGTGGGGACTGCAGCGGCAAATAACTACTAATAAAAAGGCAGCAGTAGAATACTGATGTAGCCGTACCGACTATTAGAATAATTTTGCCTAGCAAATGCAGTTGGCTGTTTAGAATAAGCAAACTCTGTTTTTGGAAGTGCATTTAAATGATCAGGGGCTGGGCTGGTGCTTGTGCCTCGGCAGCAGGGGCCTGACACCGGGCTGGGGGCACCTTCTCCTACAGGACTCCGGGCCTCAGCGCAGGTCACAGCCGAAGCCTGTACTGGGCAGATCCTGGGAATTCCATCCTTACCTACAGTCTAGTGTACAGACAACAGGTGTGACCACCTGGACTCAACACTGCACAAATATACACCGAATAAAGGGGTAAGTGGATTAAATGACCAGGGCTTCCCACCCACGACAGGTCAGAGACCCCAGCCCGGGCCCCGGGGGAACCCCATCCCTGGGAACAGCAAGATGCCAAGCTGAGTGGACACTGCACAGGCGGTGGGACCTGGCAGATCAGCAGATTTGAAAGAGAGCTGATTGGTTGGGCGCGGTGGCTCACGTCTGTAATCCCAGCACTTTGGGAGGCTGAGATGGGCGGATCACCTGAGGTCAGGAATTCAAGACCAGCCTGGCAACAACATGGTGAAACCTTGTCTCTACCAAAAATACAAAACTTAGCTGGGTGCGGTGGCAGGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTGCAGAGAGCCAAGACTGTGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCTGTCTCGAAAAAATAAATAAATAAAATAAAAATAAAAATAGAGAGCTGGAAATCTAGAAGGAAATAGGGAGCAGCTGCCAACAGGTCCTGGGTTTCAGTCTGGGTGAAAAAAAATGTTCTAAGGTTGACGGTTGTGATGGTTGTTGGTGGTGATGGTCGATGGTGGTGATGGTTGACGGTGGTGATGGTTGATGGTGGTGATGGCTGCACAACTCTGTGGACAGACCAGCGATCATGGAGCTGTACACTTTAGATGGGTGAACTGTATGGTGTGTGAATTACATCTCAATAGAGGGTCACATACATATTTAAGAAGACAGACAGCAGGAAGGCAGGCCACCCTGGCAGAGAGTCTTCATCCCTGGCTGGGTGGGTCGGGCAGGCCAGGAGCACACTGAGCTCTCAGGATCCGGCTGATTTCAGGGTGGGGAGCCCACCAGGCCTCCACCCCATGATGGTGATTATTAATGAGGGAACCACACCCTCTCCGGCAGCTAAGAGTGTGGGCTGCGCTCACTTGGGAGACACAGGTGGGCGGATCTGAGTTGGGTAGTAAAGGCCGCCCCGTCTCTGCGTTCTCCAGCATCCTGGGGCCTCGGTGACTGTGGCCAGCTTTGTTCATCGACTGTGTAAAAAGCCACCTGCATGCTTGGGGGTGCACTCTGCCTCAAGCCCCACTGAGGCCGCCTCTGTACAGAGTGGGGGGCTCTGGCCACAGATGCCAATGAGTCAGGCATGTGGAAGTGAGTGTGGACCGCTCCACAGACCGTGCTGAGTGTTCTGTCCCACTGCCCTACAGGAAGGTCAGGTTGGTTAGAGGGGGATCCCCAGAGCCCCTGCACCCCGATTCCAATTAGAAGCAAAACCACCATGGTTTCCCCACCCTCTGACACAGTGGTTCTCAACCGGGGGTAATTTTGCCTTCACGGGAACATCCGGCAATGTCTGGAGACATTTTTGGCTGTCACAACTGTGAGTGCTACTGGCACTTACTGGGTTAAGGCCAGGGATGTTGTGAGGCATCCTGCAATTAATAGGACAGCCCCCCATGGCAAAAAACCATCCAGCCCCAAACCTCAATAAAGCTGAGGTCAACAACCCCTGTCTTCATGGCTCCAAATGTTACTGATGATGGATATGAGTCGTGAAGAGCTGCATCCCTAGAACGGTCTCAGAACAACACGGACTGTATGAATCACATGCCACTCCCCAAGCCCACTGGCCCCTGGCCCCAGCCGGTCAGGCCTCAAGGGGGGACGCCAAGCCCTATGCTATTCAGGGTCTCGTCCCTGGAACGTGTCCTCAGACTCAGGGACAGCCCAGCAGGTTTCACAGAAGATGTTCACCCACTCCTGGGGAGCAGGAAGGCAGAGGCGGCTTCTGTCACCTCTCACTATGAGGACCATGCATGTCAGCAGGGGAGGGACAGATGCCCATGGAGCTGTCAGCCTGAGGCCCACAGGGCAGTGGTGAAAGGAGAGCTGGCAAAGCCACGTGTGAGGCTCGAACAACACTGCAGATGGAGGCTGAGCTGAGAAAAAGCAAACACAAGGAAACGAGCTGCTAGAAGCCCATGGTGTTTCAAAACAACGTGTGAGTCTGCAAGAGCATGCAGCAGCCGATATAGGGTGACGCTCCGCACAGGGTTTCAGGGTGGGAAACCCCTGGAAAAAGCACAAATGTGGATTCCAGTTTTTACGCTGAGATTTCCATACTCTACTAATTATTGCCATAAATATATGTTGCTTTGAGTACAGGAAAAAATATGTAAGGGAATTTTCAGACATAACTATGTTCAGCAAACGAATCTTTCATTTCTGGGGTACAATTAAATCCAGAGTTTCAAAAACAGAAAGCCCTGGCGTCAGTTCTGCTGTGCCCAGGGTCCACACGTGGGAGGTGCAGGTCAAGACTGCAGGCCTGCTTACTTCATTTTAGGGTTGCAAACTACGGCCCTTGGGCCTAATCCTGCACATCTAATTTTGTAAATAAAGTTTTACTGGGATGCGACCACATCTACTCACCTGCATATTTTCTGTGGCTGCAAAGCCTGAGGTATTTACTCTCTGGGTCTTTACAGAAAAAAGGGTACCCAGCCCAATTTTAATAAAGCAGTCCTGCACCTCCCTAACGTGGTCACACATTCACAGAAATGACCACGCTGGCAGGATGCCCTAACAGTGGACATATTAACAACGGTCTTCAGGCCCCACTTAGGCTGATGACAGGGAGTGCAGGGTGATAACCAGCTTCAGCACTGAGAGAGCGGTTCTGCCTCTTGTCTTCTGAGCCTCAGTTTCCTCCTTTTTAAAGTGGGGATACCGGGCTTAGTGGCAGCAGAATGAGCCTAGTGCACTGTCAATGACACAGGTGGGGGTCTCCTTCCACCCCCAGCAATGCCCTTTCCCTGGAAAGTAACCCCTGATCCCCAGGAGAGGGGCCCACTCATATTAGTACAGCCCCTCCAAGTCCCAGGCACATGGGCCCATCGGGGTGTCACCGGGAAACTGGGAATGGTGAGTTTCTGCAGGTGACCGGCATTTCAAGAGATGCACAGAATGCAGCCTTCTCCACCAGGATGAGACAGAGTGTGGAGAGCACTGGGCAGGTCCCTGGCTTTTCCAGTCCCGACCTAGCCCTTCCCCCGCTCTGCCCCAGCTGCAGGACTTGCCCTGTGTCCTGATCATGAGCCCAAAATTTCCCGTCAAATCACCCCCAGTGGGATCCTGTTATTTCCAACTCCAAAAAGTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTCTTGAGACAGGGTCTTGCTCTGGTGCAATCTCGGCTCACTGCAACCTCTACCTCCCAGGCCCAAGCGATCCTCCACCGCAGCCTCTCAAGTAGCTAGGATTACAGGCGCACGCCACCATGCCGGGCTAATTTTTGTATTTTCTGTAGAGACAGGGTTTCACCATGTTGCCCAGGCTGGTCTCCATCTCCTGGGCTCAAGCAATCTGTCCACCGTGGCCTCTCAAAATACTGAGATGACAGGTGTGAGCCACTGCACCCAGCCCAAGGTCTTTATCAAAATCACAGTATTATCAGGTTATGGTGAGCAAAAAGTTTGTTTTTTGCTTTGGTAAGAGAGAAAACGAAGAGGAGGCGGAGAGACCACAGGGCCAGGAGAATGGGATGATGGCTCTCAGCCAGTTCCCATCTGGGGCCTGGTGGGGCAGCAAAGGGAGAAGAGGGCAGCAAGAGAGGAGGGACCTCATGGGGGTGGGCATCAGTGGGGACATGAAAGCTGGCCCCTGGGGGTCTTGCTCACCCATTTGCTCTGGGCTGTAACTGCACCCTGGCCCAGTGGCCTAGAAGAATCACCCAGCACCAGCAAAACCCAGATGGCTGAGAGTGGCCTGGCGAATTGGAATACAGAATATGAGAGCCCTGCTCAGGGAGGAGCCTGGGACACTCTTCCCCATCTCCTCTTATTTCTCAGTAAGAACTTTTTCTGAAAATTCCCTATTATAGGCTGGGCATGGTGGCTCACACTTGTAATCTCAACACTTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGTCTAGGAGTTTCAGACCAGCCTGGGCAATATAGCAAGATCCCGTCTCTACAAAAAATGAAAAAAATTAGCCAGGAGCGGTGGTGCGTGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGGATCTCTTGAGCCCAAGAGGTCGTGGCTGCAGTGAGCTGTGATCGTGCCACTGCATTCCAGCCTGGGTGACACAGCAAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAGATAGAGAGTAAGAGAGAAAGAGAAAGAGAGAGAAAGAAAAGGAAGGAAGGGAGGGAGAAAGAGAAAGAGAAAGACAGGGAGGGAGGGAAAAGAAAGAAAAAGTAAAGAAAATAAAATTCCCTATTATAAAGGACATGTACTTCCTATAGAAAGTTAAGAATAAATCCTCAGCAGGCACTGCCATTCCAGGGCGATACAGTTAGGATCCAAGAAAAATCCTCCACTACCTCCAGTCACTCAATGACTTTGACGGAGTCAATATCATACCTCCGACCCATTACCACGTGTTTCCCAGACGTCAAAAAGAGCTCAGGTTCCAGTTAGTTATTTTGAAATTCAAGGGTACATGGTTCACTTGGCTTAATAACAATGATACCTCCATGTATGTATGCATATCACACATGTGTCTGTGTACACGTGTGTGAACATGTGTGTTTGCAGTTCAAAATGCCCATCTACCCGCTCCTTCTGGTTTAACTCTCAAGGTATGGGAGAACTCTCTGCCAGGGAGAACAGGAGGCCCATTTTACAGAGAAGGTTAATGTGAAAAACTGCAACAACTTGCGGCTTCAGAAAGGAGGAGAAAGGAAAAACTGTGATCCAGGAGGTGCTGGTGGGAGCTTTTGGCTCCCTTGCGAGGCTGCTGGCTGCCCTGGATTCCTTTCAGAGGTGTATCTTATCTGACAGGTCTTTATCCTTTTAAATAATTCAGTGAAGTATAAATATAGAAGCAATTGGAATGCTTTTTGAAGACCCGAGCATCAAGAAGAATATCATTTTCACTGCCACTTTTTCTCTTGGCATGAATTTTCCGAGACACTTCCCTTAATAAATGTACCTCCCCACGAAGGAGCGTTCCTGGGGCTCGCACTGTGCCCGCTGAGAACACAGTGTGCCTGCAGTTCCCATCAGCTGCTGGACCCCCAGACCCCATCATTTCCATTTACAGATGAAGACCTGCAGTTCCCACCAGCTGCTGGACCCCCAGACCCCATCATTTCCATTTACATATGAAGACCTGCAGTTCCCACTGGCTGCTGGATTCCCCAGACCCCATCATTTCCATTTACAGATGAAGAGACAGACAGAGAAAGCCACTCATCGATGCATGCAGTGAGTCCTCATGGAGCTGCCAGGTACTGTCCTAGTCCCTGGGGACACAGATGCAAACCAGAAAGTCAAGGTCTCTGCCAGGCTTGGGCTGGAGAGGGGGCACAGAAAACAACCACACAACGTCAGGACGGGTGGGTCTGATGCAGACAGTGGAGAGGATGCGGCTGGCTGGGCAAGCTGAGTCCTGGGATGGGAGGAGAGAGAGCCTGGGGACAGCTGGGCGGAGGCAGAGGCCACCCCAGCAGAGCACCAAGAACCGAAGTAGAAACCGGCAAGGGGCCGGGAGGCAGGAAGGCAGTGGTGGGGCCAGGCAGCAGCAAGCTGGGATGAGCTGGGCTGGATAGGAGAGAAGGGCACAGGACACAAGCCCTGGGTTATGCAAAGGGGGTTCTCAGCAGGGGAGGGATGAAGAACTTGGGTGACAGAAAGTGGATTTGAGGGAAGACAGACTGGAAGGAAAGAGGCTGGATGGTGAATACATAGTCCCAGGGAGAGACAGCAGGGCCCCAGGCAAGGGTGAGAAGGGTGGTGGGGACAAGAGGGGTGGAGGGGACAAGAGGGGTAGACGGGCCCAGAGAGGGTGGAGAGGGAATGGACAAGTCCCGGGATGAGAGGGACGGTGAGAAACAGGAGGTGGCCAGGTTTCGGGCCTGAGCTCCAGGGGAAGGGCGTTATTTACAGAGTGGGGAGCAGCTGCCACACTGGAGTCTCCTAAGAGGTCGGCACGTGGGGCCATTGGCAAGGAGCAGACATCACTGCCAGAGCTCAGGGCAGAAGTGAGCTGGGAGACTCCGACTGGGGACTCTTGGGGTTTTCTAGAAGGCGCACAAGGACACAGACAGGCCCGCCGGAGGTCACCTCGGGAGTCACTGCAGGAGGGAATCTGGGTAACAGGAGCGTGCAGTGCAGACGCCGAGAGATGCCACAGAAACGTTGAGCTGGATGGGGACAGAGACGGGACCTTGGAAGTGCCATGTGGGTGTGACTGGGTTTGAGCAAGCAGGGGTGAAAGTCTGACCACACTGTGTCAGTGAGACAACAGCCATGAGAAGGTGGAAGCCACGTGTGCAGAACTCTCCCGGGGAGATAAGCAGTGAGTGGGGAAGTTAGGGGTCTGTGTGCAGAACTCTTCCAGGGAGATAAACAGTGAGTGGGGAAGTTGGTGGGAGGTGTGTGCAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGTGGGGGTGTGTGTGTGCAGAACTCTTCCAGGGAGATGAGCAGTGACTGGGGAAGTTGTGGGGGGGTGTGCAGAACTCTTCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGGGGGTGTGTGCAGAACTCTTCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGGGTGTATGTGCAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGAGGGGTGTGTGCAGAACTCTTCCAGAGAGATGAGCAGTGAGTGGGGACGTTGCAGGGGGGTGTGTGCAGAACTCTCCCAGGGAGATGAGCAGTGACTGGGGAAGTTTGTGGGGGGTGTGCGGAACTCTTCCAGGGAGATGAACAGTGAGTGGGGAAGTTGGGGGTGGTACAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGCGAAGTTGGGGAGGAGGGGTACAGAACTCTCCCAGGGAGATGAGTGGTGAGTGGGGAAGTTGGGGGCGGGGCATACAGAACTCTCCCAGGGAGATGAGCGGTGAGTGGGGAAGTTGGGGGGGATACAGAACTCTCCCAGGGAGATGAGCGGTGAGTGGGGAAGTTGGTGGGGGCGGGGTACAGAAGTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGGAGGGGAGTACAGAACTCTCCCAGGGAGATGAGTGGTGAGTGGGGAAGTTGGGGGAGGGTACAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGTGGGGGGGGTGTGTGCAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGGTGGGGGGGGTGCAGAACTCTCCTGGGGAGATGAGCAGTGAGTGGGGAAGTTGGGGGGGTATAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGGCGGGGGGTGGTACAGAACTCTCCCGGGGAGATGAGCAGTGAGTGGGGAAGTTGGCGGGGGGGGGGTGTGCAGAACTCTCCCGGGGAGATGAGCAGTGACTGGGGAAGTTGGGAGGGGGTGTGCAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGGAGGGGGTGCAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGCGGGGGTACAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGTGGGGGGGTTGTGTGCAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGTGGGAGGTGGGGGGTGTGTACAGAACTCTCCCGGGGATATGAGCAGTGAGTGGGGAAGTTGGGGTGGGGGGGTACAGAACTCTCCCGGGGAGATGAGCAGTGAGTGGGGAAGTTGGGGGAGTACAGAACTCTCCCAGGGAAATGAGCAGTGAGTGGGGAAATTGCTTGGGAGGGTACAGAACTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGTGGGGGGTGCAGAAGTCTCCCAGGGAGATGAGCAGTGAGTGGGGAAGTTGGGGGGGTGCAGAAGTCTCCCAGGGAGATGAGCAGTGAGCAGGGAAGGTGGGCAGGGGGTCCGTGAAGCCAAGGAACTTCTGGAGACAGAAGTGGGTGGAGTGTCTTCATAAGCAAATGGGCATGACGTAAGAGAAGGCAGAGGTCAAAAGTAGAAACACTGGTGGCAGACATGCCCACAGGCACAGACAACGTTGCAACCAGGATGTTAACTCGGAAGCTCCAGGCCCCGTCAAGCCATTTCCTTTCAACGGCACTGAGGCTGTCTTCACTTAAATGTCACAGATACAAATTACTGCACACTCCAAAGTGTAAATCAGGAGTTTGTTTTCAGGTTAAGCTATCTTTTGAAATAAGGCCTTTTGGGCAGCCATAAATGTAAAAACAACTAAGATGTCTGCATAAGTAAAACGGGGAAGTGGCTGGGACGCTTGTGTCATTGGGACAGGGCTGGAACCTGGTCCCTCAGACCAGCCCACCCCTTGAAGAGCTGTGCCTGTAAGTAAGGGCCAGGGTAAGTACGAACACACCCCTCACTGCCGTGGACATAGGTGCTTCTGCCTGACCTGTGCCCAGTAGAGGCCCCTTCCCCAGTCAGTGGGTTACAGGAATGCATCCACAAGGCATGGGTTGGAAACCTGGCTTCCTCATTTACTAACGGAGCGGCCTTTGACCACTCCTGCATCTTCTGGCCTGTATAAAGGGAAAGCCAACCAAGCCAGCCACCCACCAGAGCTGGGGGAGGTGAAGGAAAGGGCGTGTGGACACCGTCGCCATTCAGCGAGACCCACACCCACAACGCCCAATGCTCAGGGGGCCATCACCCCATGATGGCCCCATGGGAGCTGCCACAGCTCGGACAGGTTCCCCGTGGGACACCAGCAAGGGCACAGATGCAAACAGGAAACACCACGTCTTCCTACCCTGGCTCGTGCTGGTATCAAAGACAGGCAGACTGTTTTTTATTATTTTTACCTTCCAGACAAATTGGCCTAGCCTAGTAACCTTTGATATTTAAAACTTGCTTCGCTCCTTCATCATCCAGGGCAGAAAAATGAACCCCAGGCTGCTCCCCTCCCTCTGGAGCTCTTGGAGAGCCAGGATGAGGTGAGGGGTTGACAGATTAGACACAATTTGATACTTACAATCAAAGCCCTAATTAGGTGATTTCATAAAAGAAGAGAGAACATTCTAATCATAGTGTATTTTATTACAAGTGTGGAGGTGGTAAGGCCTGCCTAAAACTGATAAAGCACATGTAACAATCCATACACCTGGGTGCTTTTAGATCTAACAAGGAGAGGCTTGTTACAGGAATATCGTCAATAGCAGCATCACCATCATCATCATCATCACCAGCCTGCATCAGTCACCATCAATGAGACCATCGTCACTATCACCGTCGCCACCATCACCATCACTGCCATCATCACCACCACCACCACTACCACTATGACCATGAACATCACCACTACCACCACCATCGCTCACCAACAATATGACCACTGTCACCATCACCATCACCACCATCATCACCACCACCACTACCACTATCATCATCAATATCACCAGCATCACCACCATCACCATCATCATTATCACTGTCACCACCATCCTCACCACCATCATCACCACCACCATCACCATCATCACCATCCATATCATCACTAGCATCATCGCCACCATCGCCATCACAACCATCATCACCATCACAACCATCACCATCACCACCATCATCACAATCATCATCACCATCACCTGCCGTCACTCACCATGAACATGATCACCGTCACTATCATTACCATCAGCACTGCCATCATCATTAGTACCATGACTTAATCTACAAGTAGAAAGAGGAAGGGGGTGATGTACACAAGTAGTCTCAATGGCTCACTGAGTGACAGACACTCCTGCTGTTTAGAGCCCAGAAACTGTGAATCCTAAATGCCCAGCAATGCTTGGCACAGTCCTAGACAACAGAAGACTGCATCCTGACCCCCAGTGTCTGTAGCAGAAAAGCTCAAGGGCTGTAAGACTCATCCAAAGAGACTGGAAGAATCTGAATATCTAGGGAAGGCAAATAAAGTGCCTTTGCTTGACAAGTTCCCCAGCAGCACAATGCAACACCGCAACCATGACTGTGTATTTGGCGACCACAGGCCATGTTCAGGGAGAAGGGCTGTCAAGCCACCATTAGATGCCATAGTGACTTTGGTCATGCTCTGTGAGGGCAGAATGGAAAGAGACCTTAATGGGCATGGAGTCTGGTATGCTGGTCCTGTCTCACAGTGGAGCCAGCTGCTGCTCTGAAGATTCTTCAGCATCACTGGGATTCTGGGTTATGGGCTGGAAGCCTGGCAGCTGTACTATTCACAGGTTCTTTGGGTAATTCCAATGTGGAGGTTACAGCTCAGCTAGAAACCTCATTTGTTCTGCTGCACTGCCATCACCATCACCATGACCATGCTCACCACCATCATCAGCACCATCGCTGTCACCATGACCACTGTCATCACCATCATCATGATTACCATCACCATCACCACCACCATCATCACCATCAACCACCACCATCATCACCATCACCATGGCCACCATCACTATCACCATGACCACCCTCACCACCATCATCAGCACCATCACTATCAACCACTACCATCATCACCATCACTGTCGCCATGACCACCATCATCACCATCACCATGATTACCATCACCATCACCACCACCACCACCATCATCACCATCATCATTATCAACCACCACCATCATCACCATCACCATGGCCACCATCACTATCACCATGACCACCCTCACCACCATCATCAGCACCATCACTATCAACCACCATCATCACCATCACTGTCACCATGACCACCACCATCACCATTACCATGGTTACTGTCACCATCACCACCACCACCATCAGCACCATCATCATCTTCACCTTCACCATCATCACTATCAACCACCACTATCATCATCACCACCTTCATCATTGCCACCACCACCATCACTGCCTTCATCATCAACACCTTCATCATTATCACCATCAGCCTCACTATCACCACCTTCATCATCACCACCATCATCAGCACCACCACCATCGCCAGCCTCATGACGACCATCAGCAACAGTATCATCACCACCTTCACCATCACCACTAACACCACTGCTATCATTACAGCCACTATTTACTGAGCATCTACTATGTTCCAGGAATACCATATTACCATATATTTGTTTTCTATTTTTAGCCTCTTAGCAACCCTGTGAATTCGGTTTAATTATCCCCACATTACAGATAAGGAAATTCAGGGCCCTAGAGAGACAATAGGTTGTCCAGGACAGCATAGCAAGGCAAGGCAATGGGCTAGTCCAGATGAAACCCAGACCACCATGCCTCTTTGAATTACTGTTCCACTTCCTCAGGGCTGCCTCCTGACTCCTTTCCTTGAATCCTGTCTTGATTCAAAGGCACCTCTGTCCCATCCCTGAACAGTCTGTTGTTCAACACTACTCCCTGCATGCCCTGTGTGTGTGTGCCCTGTATGGCACCCTTTCTGCTTAAAGTTGCTAGAGTGGTTTCTGCCCCCTGCATGAGTGCCTGCTCTAATGAACCACATGCCTCATACATGTGTAGACAAGGGGGAGTGAGTATAGCAAGGTGTTCAAATGGTGACTCAGGAAGGAAAGAAGCTTTGGGTCAAGTACAACACGCAGTGCCTGCAGGACAAAGGTAGGGGTTCTGCATTCCTCCTGGTCACTTACTGGCACCTGGAAGATGCAGACATGAAGCTGTGCCTCTCTTGGCATCACACGAGATGTGGTTTGGACCAGCTTCTTTAACTACATCAGTGAGACACTCCAAAGAGTTTGGGGAGGGCATGAGGGAGGAGATTAAAGACACCCTAGAACCCTAAGGAGGAGTATGAGGGATACACGAAGCTGGATCCTAGACCACTCGCAGACATTCCGACTGACACTGTAGCCAGAGGTCAAGGGGCCAACCAGTCCAGAGCCTATGACCCTGCCCACTGGTTCTTGGAGGCTAGGCAAGGCTGGAAATCAAAACCAGGGGAGCCAGCTAATGCATTTCTACCCAGACAGAAGAGGGGGCACACAGGCAGGAGTTGGAACAGCTGTCCGCCCTGGAATGGGAGAGCTCTCCATACTACCTCCAGAGGCTTCCTGGCTGCAGGAGAAGCCACTCAATCCTGGGGAGGGGGATCCATCAATAAGACAAATGGGGGAGAGGAGGAGATGCAGCCTTCCATTCCAAGGCTTAGAGAAGAATGGCCTGCAGGCCAAATCAGCCCACTCCCTGTTTTGTAAATAAAGTTTTATTGGAACACGGCTACACTCTGACTTACATACTGTCTATGGCTGCTTTTGCACTACAGTGGCAGTTGCATCGTTATGACGGAGTCCATGCGACACGCAAAGCCTAAAATGTTACCCAACTGGCTCTTTATAGCAAAAGCAGATGGCTCATGTGCTAACCTGAGGCCCGAGGTGGGGAGAGGATGTCCTGAGAGCCCCAGCCAGCTTGGGACCCTCCTGGAGCCGGCAGCTGAGGCATAGGACAGATATGGGGCATGTGGAGTGTGGAGTGATACCAAGTCAAGCTCAATACAGATCATCAAAATGTGTTAACCTTTTCTAATCAGAAAGAAACATCAACACTTTCAAATACCATCTTGTCCACAATTATTTCAAGTGACAAAAAACAGACTTTTCTTGAGTTTTCAAGATAAAATGTGCTTGCAATCTACTGGGGAAAATTAAGGAATGTTTTTTCCATCCAAAGCAGTAATTAGGAAGCAGATGTTGGTGCAGATGTGTTTACCAGCCACAGCCAAGCCTCATGATGTGTTTTTCTAATGCAGCTGAGTAATGTATCTCCACACTCACACAGACATTTCAGCATTCACACCCCGTGGCATACCTAGGGACACAGCTGCATACAAACTACATCAATGTGCTTTCTTTGAGTGGGGGAAGTCTGCAGCTCTGCAAAATGCTGCTCACAGCTCAGCTGAAATGCCACCCAACCGCAGCTATGAAAGATGGCGGCTTATGCCTCTGATGATATCCACACGTGCTTCCTCTCAGGTGGACCCAAGGGGAAGGGAGCATCAGCAGAGAAAACAGGGAAGGCATAATAACTGCCTGGTCCTGGACATTTTGCCCTGGCTATGTCTCACAAAGGGCTGCAGAGAAAAATGTACAACTATGTGAGGGAGTCATCAGCAGAAGGCTTGACTGAGGGTCAGGAAGTCTGAATTGGATCTTGAAGGATGCATAGGAGTTTTCCAGGGCAAAGAATCCAGGAAGATTGAACAGCTAGAAGCAAAGTGGGACTCCAGCAGAGTGGCTGGAGGGGCCTGGGCTGGTGAGGAGCCATGGAAGGGCTGGGGAATGGCTTGGGTAAAGGATGAGGCTTGAGATTCCACCCCGGAGGCCACCATGAGCCAACAGGATGGGAGCACTGCTTTGGGATGGGAAGAGAATGCTGACAGCCTGCAGAGGATGGACCCTGGCACAAAGAGCCCTGGGCATCCAGCAGAGTTCCTCCTCTGAGATCTCCCTCTGTTCCTCCAGGATAAAGAGCCACATCCCCTCCCAGCCCACGCTGCTCTGCCGCTTAGTGTAGCATCCACATCTCGACACCCTCCAGATTTGAAGTTCCTTGAGATCAGAGAAAGAGAAAAAAGAAGGCACGGACAGAGAAGTCCTTCAATAGTGATGTCCAGGAATTCACCTGACTTTGAGCACCAAGGAAACAGAGAAACAGCCCCCTGTCCTCCTAAAGCAGTGCCTGCACCCCACCTATGCCCCCGTGAGCCCAGGGCCCCTTCTCACCAGCTCCACTCCACAGGCCGCCCCCACCACTTAACCCCCCATGGCTTCCCCGCTCCTACAGGACCAGCAGCCTCCTGCGGGACCAACAGCCCCCCGCGCCCCTGCTTCACCTCCCCGTGAGGCCACGGTGCACACACTGGGCGGGGTGTCACTTGGCCTTGTCATTTAGGATGCAGCCTCCCAGAGGGCAGGGCTCACATCCCAGAAGCCTTCAGTGTTTCCTAGATACATTCACGTCCTGCTCTCCTCGGCTCTCACACTTGGTCTTACAGGGAAGTGTGAAGATGATTTGCTTTTTCACATCAAGGTTCCACTTGTGGGCATTTTTCCCCGAAAGAAATGAAAACAGGGTCTTGAACACATGGTTGCATCTATGCTCATAGCTGCATTATCCACGACACTCAAAAGGTGGAAGCCACCGAGGGTCCCCTGACAGATGTCCACGCACATGATCCACACAAGGGAGTATTATTTACCTTAAAACTATTATTCAGCTTAAAAAGGAAGGATAAAAAATTCCGACACAGCCTACAGCGTGGACAAACCTCGAAAACATTGCACTCAGTGAAATCAGCCAGACACCAAAGGACAAACACTTTATGTTTCTACTCATATCAAGTCCCTACAGCAGGAAAATCTACAGACACAGAAAGTGAACAGGGGTTGCCAGGGGCTGAGGAGAGGGGAGAGTTACATTTGATGGGGACAGAGTTTCAATTTTGCAAGATTAAGAGAGTTCTGGAGATGAATGGCAGGCAATTGCATAGCCATGTAAATGTACTTAATGCCACCGAACTGCATACTTAAAAGTGGTTAAAATGGCATAAATTTTGTTATGTGTATTTTACCACTTAATGAAAAAGCACATTGGGGCGTATCTGTCCCATGCAGTGGTGGAAGGCTTGCTTTTTGTTTTTTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATAGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACTATCTCAGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCTTGCCTCAGCCTCCCGAGTCGCTGGGATTACAGGCACATGCCATCACACCCGGCTAATTTTTGTATTTTCAGTAGAGATGGTGTTTCACCACATTGGCCAGGCTGGTCTTGAACTCTGACCTCAAGCAATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGCTTACAGGAGTGAGCCACCGCGCCTGGCCAGGCTTGCTTTTTTAATTTTTATTTTGGAGACAGGGTTTTGCTCTGTTACCTAGGCTGCAGTGCAGTGGCATGATCTTGGCTTGTTGTAGCCTTAAACCCCCAGGGCTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACCACAGGCACATGCCACCATACCCGGCTGATTTTTAAAATTTTGTAGAGATGGGGTCTCACCATGTTGCCCAGGCTAGTCTCAAACTAGATCAAGTAATCCACTCCTCCCTCGGCCTCCCAAAGCACTGGGATTACAGGTATGAGCTGCTGCACCTGGCTGGAAGGCCTGCTTTTTTCATGTGATGGTGCCACGCATGCCTGGTGGGGGTACCAGAACTATCCTGGGGCTTTGTCCGCCACGTCCTTCCCCATCTCATGACTCTGATCTGCCCCTCTCCATGTTCCATATAGAGACCTGCTGACGGGGTAGATGGCTGACTCCAGAACTGAACAGAGTTTGCATCCCAGCTACAGAGGGTGGACAAGAGAGCCCGGCTCCTCACGCATCTTATGGAGCATGGACAGCATGGAGGCGTGGCACTGACCAGACCTGAGTCTTGAGCCCAGTTCTGGCACCAGCTGTGGGAGTGGGATGCTCGCCTTGCTTTCCTGGGGCTCTGTTTCCTCCCTTCTACAACAGGGTAACAGTTCCCACTGAGGCAGCAGGTGAGGATGACCTGAGATGCCCCCTGCAAGGCCTTCCCGGTGCCCCCCAGGGTCAGGGCTGGCTGGGGTGCGTGCCACTGCAGCGTGTGAGAAACAAACTTACCCGTTTAAACCCAAAGAATGGACTTAGAGACCCGGAGAACAGCGAAAGTGAGACTCTTAATGATGGTTTTGCAAATCAGGTGTCTGATGGGCAGGCACACCCAGCATGGTTTCAACAAGCAATTTATCCCCCAGTACACAGGTCCCTCCCCCAGCTCCTCAAAGGCTGAGTACTGTGGGTTACAATTTTTCTGGACGTTGCCTATTGGTTGTTGGGTTGGGGCTTTACGTGTTTTTTTAAGGATTGTTTTGCTGTGTTTTGCTGCAGTCCACAATGTGTTGCAATTTTAATTAACTTAGGGGCTTTTTAAGTATTTGACTTATGACCCAAGTAGCTGGGCAGGCTGATAAGAACAGACAATGCGAGCTATTTTGCAAGCTAGCAAAGTTTCATCTTAGACTAAACTTTTTTGGTTTGGGTGAGGGCCACTAAGGGGCAGGGGCTGACAAGCAGGCATTGGCTAATTAAGCAGGGGCTTAGTATATTTTGTTTCTTTTGTAGTTTGCTGACCTAAGCCAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTAGCCCAGGCTGGAGTGCAGTGGCACGGTCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGACTACAGGTGCCTGCCACCATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCTGACGTAAGCCAATTTAAGGCACTTTGTTTTGGAAATGGACCACTGTATACATTATTTCCTTTAAATGCGCTCAGCACTCACCTGGTTGTAGAGGGCGCAGATGTGCAAGGCCGTGTTCCCCGAGGCATTCTGGGCACTCATGTCTGCCCCGTAGAACAGCAGGTGCTCCAGGTGCTGCACGTGCCCGTACCTGCAGGCCTGAAACACAGAACCCAGGCTGTGAATCAGGAACCCTCCGCCACGACAGCCGCATGCACACACAAAGTACACCAGCCACTCGGCTGCTCCACCAGAACCCCAGGGCAGGGCCTGTGCGGACCCCAACCACCCACCCACCATCTGGGCAAGCGCTCTAAAGACATCAGCATGCACCACCAGACCCCTGGCTGTGGATCAGGGAGAAAGACCTTCATGGTGGGATTGGGGACTGGTGCTCAGTTGTGAGACAGAGGGTCTGGGAAGGGGCCCCAAAGTCCCTTCCATCCTGATCCCGGGGCCTAGAGCCCAGAGGTGCAGGATGTCTTTCTCCCATCCTCAGTGCCCAGCTCCACAAGATGCAAACCAGAAGGCTCAGACCCGGCTTCAGTTACCCAAGCTCCCCCTTCCAAGGGGGCAGCACAAAATGGCCAGGAGAGGCCTTCACAGCCCTGCACTGCATCCACAGGAGTGAGCCCTGTCCTTCGACGTGCGACGGACGGCCCCACGACTGCTTTAATGCAGTCCAGCTCCTAAGTAAGTTGCAGGACGCAGGGGTAGGGCAGACCCATACTATGATAACTCCTCTCTGAGAACTGCAACATGTGTGACTTGTGAACCATCAGGGCCCAGGGGTCAAACAGACCCAGTCCTGAACCATTTATCAGAACTTTCGCCTCAGTACCTATGTGCACCCTCATCTGTAGGCAGAAACAACCCTTAACCCTCACAGGGTTCAGATGAGAATCACGTGGGACAAAGAACACCACAGGGCCTCACACGAGGCTGGGCACTGAGTCAGCACTTGGTGAGTCAGTGATGCCCCTCCCCACCCAAGCTCACAGGGGCCAGGGAGGTCCCCGCACAGGTGATGAGGGCCCCTCTGTCCAGCCACACACTGCTCGACATGGTGGCCACAACCTTGGACCTGGAGAAAAGTCGGTCCTGACCTAACACATCTCAATCCCAGGGTCGGGAGGGAAAGAGGTGAGCCCCACCAAGGGCAGGCAGCCTAGGGGTGTTGAGAGCAGTAGGCGCCATGGTAGCCCAGGAAGGGGTTCTCATGAATCCTGCTCTACTGCTAATTGAGACAGATAGAGGTGAATTTCACCTTCTCAGGGTCCACGAGAAAGAGCTACACCTCAGCAATTAACAGTGAGGAAAGATGACAGGGAAGATATTGAAACTATTAATTGGATGAGCTATAAAAACAAAACAAAACAAAAAAAAAACAAACAAAAACAAAAAACGAAAAACAAAAAAAAAAACCACACACACACACGAGAAATTTCCATTTACCATTGCTGTGTCTCCCACAAATCTCATTAATTTATAAAGTAGATCCCTGTTGCAGGTTTCCTTGCTGTCACCTGCCCGGCCCCCATGGCCCCTTCTTCTGGGAACTCCACCTGCGTTTGCCTTTGGGGGCTACCCCAGCTCCACTCTCAGAGGTCCAGGGAAGGCCTCCCCACCCTGCTCCTGCAGAGGCACAGGACATAGGCAGGAGCCATCAGGTTCCAACTCCCCAGGCACAGTAAGGGACGCCCAGCTGACCTTAGAGAAGCTACCAAGTCCCAAGCTAGAACATTCATCACAACTACTGGGGAAAAGTTCTTTCCTTCTTCCAGAGTGGGGAGCAGAAAAGTGACAGAGCCTGGGAGCTGCTGGGACCCTCAACACAGAAGGGATGTGTGACAGGGGCAGGGAGAGGAAGAAAGGAAAGGAAAGAAAGAGAGAAAGAGAGGAGACAGGAAGAGACATGCACAAAGCCAAGATGACACTGTCTGAGCCCCTCTAAGCTGCAACTGACCCTGGAATTTCCGGGACATAACAATGAGGCATAACTCCCTCCCCTCACCCAGTCGTTTGCATTGGGATTTGTGTTCCTTGAACTGAAGGATCCCTGGCTATTTGGCACTCCCCAAAGGACTTCTGGGAGGCAACACTTTGTTAAAGCTTAATTTAATTGCTCTGTGGTCAATAAAGACAACTAATGTTAGCATAAAAACACTGAACAATTAATCCACACTCATTATTCCCCTTCCCCCGGTTAATCTGAATTTATGAGCTTGTAAGTTCCATCAGTCAGATGGCACCAGAGCACTCTTCCCTTGCAAGGGCAAAATAGGCTCAATGGGAAGAGATGAAACGGAACCGCTGACTCCGGGTGGATGTCTCGTAGGCGTGTTCCCAAGAGCATGCTTCCATTTTCCACTTTTCCCACATCCATTGTTTTATAACACACAAACCCGGGAAATACAGAAAAGGGCTGAACAAAAACCAAAAGTCACCCAGAATCCCACAGTCTTAGCACTAGCAGTAATTTTTTTTTTTTAAGTGTCATTTCGGCTAGTCTCTTCTTTCTGTTTTAACCCCTGGTGGTTGAGGCACGGAGCTCACACCTGCTGAGGAAGATGCAGCTGCCATGCAGGGGGGTGAGGGGGATCCAAGCCAGGTGGTGGGCAGAAGGGTCCACAGACGGCTGCACGCAGGGCTCTGCACACACAAGGACACTCAGGAAAGGGAATGGGAGCTGGGCTCTCACTGTCAAGGAAGTTACAAATACAGTACAGGAGAAAACTAGAATATGCCTTGTGGTGTTGGCTTGGAATGGGAGTATCAGTAGAAACTCACGGTTCCTAATATAGAGACTAATAAAAATGAAAATGTGGATGCCTGTGTGTCTACCCATCCCTAACTCTGCCTACTGAGAGGGTGCAGGACCAGCAACAGCCCAGCAGCCATCAGCACCCCAAGCACCTGCACCTTGGCTTCTAAATACCACTCCACACTAAAAAGAATCAGGCTCCTTGGAGAAGCAGCTGATTCCTGAGGCAAGGAAAGAGCAAGGTGAGCTTGAAATATCTTGTTGTGCCAGAAATAAAGGAAATGGTAAAAAAAAAAAAAAAATCAATGGGGCTGTGTCCCAAGGACACAGGAGCCATCCTGAAGGGACACCCACTGGCTAAAACTGGGATAATAATAACAGATTATTACCTCCTGAATAAAGAGAACTCTGCAAGTCTGCCTTGTTGTAAATATATGAATAAATAAACAAGAAGAGAAAGCTTTTCTTTACAACAGCAAGCCAACTAATAATGTAGAAGCAATGGTAGGATTAAAAAAAAATCTCCATTTAGCAACCATAATAGCATTAATTCTGGCAAGAAAGGCCAATGGATGCCAAAACTGTCAGGTGAAAGGGGTATGAGAAAACAGATTTTTGCATAGCCTCAAAGATCACCAAACAAGATCTATTAATTACAAAGGAGCAAAGTAAGGCAGGAGGTGGGACTCAGGAAGCGGGACTCAGACACCGGACCAAACTGAGGACTAGCTAAAACAGGGCGGGGCAGAAGCAGCTTTCCATAAGACACGCCCATCAGTGTGCCACATCAGTTTACTGTTGCCATGGCAACACCCAGAAGTTACCACCCCTTTCCCTGGCAATGGCCTGATGACTCAGAAGTTACCACCCTTTTCCTAGCAATTCCTGCAGAACCTGCCCCATAATTTGCATGTAATTAAAAGTGGGTATAAATGTGAGTGCAGCCCGGCCTCTGAGCTGCTGCTTTGGGTACACTGCCTCTGGGGCAGCCCTGCTCTGCAAGGAGCAGTCTCTGCTGCTGTTCACAGCTGCTTCAATAAAGGTTTTGCCAACATCACCATCCTGCCCTTGAATTCTTTCCTGGGTGGAGCCAAGAGCCCTCCTGGGCTAAGCCCCCATTTTTGGGCTCACCTGCCCTGCATCAAAAGAGGAGAAACCCAACAGACCCCACCTGACTAGGTGGTCGGTGTGACCTCCACAATGAGTACCAGGCGAATGGTCCCCATGTATCCCCGTGAAGGTGTGATGCTGACAGCACAGCATCCTTTCTAAGGCATTCCTGCCAAATGCATATGCTGGATCCCATCACGAGCAAACACTGAGCAAACCCAACAAAATGACCGCCCCAAAATCTTCAAAACAGTCACAGCCATAGGAATTAAGGGAAGCCCGAGGGAGTCTCCCAGATGGAAAGGCTCCAGGCAGGTCCCAGGCTGGATCCTCTTCTATCAGGGATGTTACTGGGACACCGTCACCACTCAAATGTGCTCTCCGCGTGGAGGGCATATGGGAGTTCCTTGTACTATTCTTGCAACTATTCTATAAGCTGGAAATGGAAACAGTAATTTACAATTTTAAAAAGAAAGTTAATAGGCCAGGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTAGTGGCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCACGCCACGGCACTCCAGCCTGGGAGACAGAGTGAGACTCCGAGAAAAGAGAGAAAGAAAGAGAGAGTAAGAAAGAGAGAGAAGAGAGAGAGAGAAAGAAAAAGAGAAAGGGAAAGGGAAAGGGAGGGGAAGGAAGGGGAGGGGAAGGGAGGGGAGGGGAAGGAAGGGGAGGGGAGGGGAAGGAAGGGGAGGGGAGGGGAAGGAAGGGGAGGGAAGGAGAGGAGAGGGAAGTGGGGAAGGAGGGAAAGAAGGAAAGAAAGAACGAACTCGCTTGACACAAAGATACTGAAAGCTACCAAAGTGTTAAAAGAAGGAATTCATCCTCCCACAAGAGAAGCAACACTAACCTCCTTTTCTTATTTTGAAAAGGGTGTCTGGTCTCTGGCTGTTGAGACAGCTGAGAGGGTGATAGGAGGGTGGAGAGTAATGGGATGAAAGGCAAAACACTGCCCTTGACACCTGCACCCCGTACCCACTCTCCTGAGGTGCTTTTTGGAAAATGCATGTGTGGGAGGCTCCACCCATGTCTGCTGCCTCTGAATCTCCTGCTGAGGCCTGGGCAGGGGCACCTGGAGATGGCTCCCCTCGAGACTGTTTGCCCCAGCGATGCCTAGCGTCCCACCCGCCCTGTGCAACCACAAGACTTGGTGTGAATTAGAAAAAAGGGTGCTCCTTCCTTCAAGCCATTTAACGCCACCTGCTGGACACTGGTGATACATCTACAGGACCTAAAACTATGGCAAGAGGAACGGCGCCACCTGGGGTTGTGCAATGCCCAGCACAGCAACCAGAGCAGCGGGGAGGTCACTGCACTGCAGGGGAGCAGCACAGGTCGGCTGAGACGAACCCCCTATCACTTCTGCTTGGCTCTGTGCCCCAAACAAAATTGTTCCCAACCACACTTAGGCATTTCTCCCAAAACATATGCCTTGTGACATGAGGTAGAGACACCACAGCCCACACAACAAAGAGTCACATCATTTCAGCTCTCACTGGGTCAGGAAGTGGGCTGCCCGTCAGTAGAGAAACAACGTCTCGTCCAAACACAAGCAAATCCCCCTCGCATGGCCTGAGCCACCAGCTGCTCCGTGGCCCCGCATACCACGGTTTTCAAAGGCTGGCTGTGGTCTTCCTGCTGGCCCAGTAGTCAAGGAGGCCAATGCACCTGAATGAATGCAGGAACACGGGCAGCGGACGGGCTGTGATGCAAACCAGAAAGTGGCTAGTTCAGTTTTGTTGGTGTTGCGGGCTGAATTGCATCCCTGCAGCATTCATGCGTTGGAGTCCCCACCCCCAGTACCTCCGCATGGGGCTGTATGTGAAGAGGGTCTTTCGAGAGGTGATTAAGTTAAAATGAGGCCATTAGGGGGCCCCTAATCCCATCTGGCCTGGCTGGTATCCTTATAAGAAGAGGAGCTGGGGACACAGACACACAGAGGGACGACCCTGTGAAGATGCAGAGAAAAGGCGGTGTCTGCAAGCCAAGGAGAGAGGACTCAGGAGGAACCAGCCCTGCGACGCCTTCGTTTGGGACTCCAGCCTCCAGAACTGTGAGATAATGAATGTCTATTGTTTGAGGAACTTTGCAGTGGCAGCCCTATGCAGCAAACACAATCACTTTGGGTCTACTAATGTGTGCTGTTCAGCCTGAAATGATCACAGACAAAAGACATCATGCTATAATTCCAAAAGGAGAGATGACTGGCATTCCCACATAAAGCTGCGGCCCTTGCCCACCTTCCCCATGGAGCCCATCACTCTCATAACATGATTTTTGGAAAGATGAGGTCTCTTAAAGATGTCACCTATGTCAGGAGGGCAGGATAGAGGACCTGCCAAAGTGCAGAGGGTGGGGTGCTGGTCTCGGGGTCTTCACCCATCCCCTCTCCTGTTCCCCGCATGTCCCTGAAGAGTCAGGGCTGACTGGGAAGGCAGGTACTCAAGGGTCCTCATTCCCTCTGGAGGCTGAGAGAGAGAGGATGCCTCTCTTCCTTCTCCAAACAGAACCTTGCCAGGCCAGAGGGGCTCAGAATATGGAACTGACCTCCCAGGTCAATTCAGAGCTGATCCCCTGAAAGCACAGCTCACTGTTGCGGCTCCAGACACGGGGGCCACAGAGGCTCGGCCGCTCGTGCCCAGGGGCAGACCCTGAGCCCCAGGTCCAGAGTGACACGGGGAAGGGCTCCCGTGCTCTGGTCCTGCCACCTGGCAGGGACCCCACACTCTCACACCCTGGAGGTGCTCATCTGGAAAGGTGCAGTACCTGCCAGCACCCACGTCCCACAGTGAGGCTCGGTCCCAGTTCCAAGGCTGCCAAGCACATGCCAGCACAAAGGGCCAGAACCCTGTTCACAATGTCCCCCCGGAGCCAATGCATGCCAGCTGCCCAGATCTGAGGGTCACCTGCCAGCACCACAGCCTGGTTCCAACACTGCTCCCACGTCCCCTGGCCAGAATGAGCCACTCCTGGCTGGCACTGTGGAGCTCCTGGGCTCTCCACCTGGCTGCTGTTCACGCTGGCCCTTCCTGTGCTACCTGGCATTGTGCTTACTGTGACCAAGCCCAGGCTTGGACACCGCGGTCACTGCGGTGCCTGAACAGTGGTCATCTCAGTGCCTAGGCAATGGTCATCTTGGGGCCTGGACACAGCAATCACCTCGATACCTAGATGGACAGTGATCGCCTCAGCACCTGGACACGGTGGGTACCACAGTACACTAGAAAAACCTCAATCTGAAGGAAGACCACAACCCATGTGGCTCCATCCCATTCTAAATGCTAACTTTCCAGTCAAGCATTGACTCCCATCTCTACCAGGCAGCTCACGCTGGGCTGTACACAGTCCCACCCTGGCAGGAAGGTAACCAGAAAGCTTGGACCCAGAACGACATAACATGGGGCTCCAGCAAAGAACCTCCCACAGGCCTGGGAGGATCAGGGGCCTGTCCCCTCGCCGTGGGGCCCAGAGAGGCTCAAGAGCTGAGGGCATCCGGCCAGGGATGGGCAGGGGGCAGCCTGGAGCAGGAGGAGAGGAGAAGTCACTGTGGCCCGAAACTATTTCTTTAAGGCGGACACTCTTCATTTAAATGCGATAAATAACAAATAGCAGCCAGTAACAACATTCAGACTGATGTCACACCCATTGCACAATGGGAGCAAAATCAAACGAGGGGCTGGGAGCAGGTGTGGTAGGCACTCTCTGAATACAACGGATTGTTTCTTAACGCCCGCCCCCCCCCCAACCCTTCTGAAACAGGTTCTCACTCTGGTTGCCCAGGCTGGAGTACAGTGGCATAATCTTGGCTCACTGCAGCCTCCACCTCCAGGCTCAGGGGGTCCTCCCACCTCAGCCTCCAAAGTAGCTGGGATTACAGGAATGTGCCACCATGCCCTAATTTTTGTATTTTTGGTAGAGACAAGTTTTGCCATGTTGGCTGGGCTGGTTTTGAACTTCTAGGCTCAAGTGATCTGCCTGCCTCAGCCTCCCAAACTGCTGGGACTATAGTGTGAGCCCCTGTGCCCAGCCTAATGTATTATTTACTTCTAATGATGACGTCAGACGTGGCCACATGATGATGACAATGATGACAATGAGGATGATGATGGGGGGACAGATGATGACAATAATGATAGGGACATTTATTAAGCACCTGGTCTATGCCGGGCACTGCAGAAAATGCCTCACGTAAATTCTGTCATAGCTGTCTCCAGAGCTCTACAAACTGTTACTCAGCCAACCTGAGAGATTAGCACACAAGCTCAGAGAGGGTGGGGCACTTGCTCAGGTGAGCCAGCGAGCGATGAGGTGGGTTTGCAACCCCAGGCTGCATAACACCCAGGCCAGAATATGGCCAACAGACAGCATGAGGAGAGTCCCTCATCCCGAAGATACTGAGTCAAACTCAGAGAGGGAGGGAGAGAGCCAGGCTTTGCCCCAAGGAAGGTACCGGGGTTCAGCACATGGAAACGCAGGGTCTGGATCCCTCACCAAGCGGCATCCTCTCCAGGACCACACCCCCTGTGGCCAGGGCCAGCGTGCTGTGAAGTTGCACGGTGGATGTAAAAGTCTTTAGCAATTAAAAATACAGAATGAATACCCCCAAATCTGACCCCTGATGTCCTTGGGTTGTGGGAATGCATTGGGGTGTTTCTTAACTTGCTTCTTTATACTTCTTTGTATTTTCCAAGATTTCCATGATGCATGGGTAATTTTTTGGTAATCAAAAACAAAACAAAACAGGGTAATTTGAATAACAACTTTTTTTTGGGGGGGGGAGACAGAGTCTTGCTCTGTCTCCCAGGCTGGAGTGCAGTGGCGCAGTCTCAGCTCGCTGCAAGCTCTGCCTCCTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGTCTACAGGCACCAGCCATCACTTGCTGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTTGGTCTCCCAAAGTGCTGGGATTACAGGCATAAGCCACCGCACCCGGCCCGAATAACAACTTTTAAGATAATTTGCAGACAGCCTGAGCTCAAATGGGGCTCTTCTAACATCAGCCTGTGGGGATGGGGCATATCCCCACTGTGTGAAGTGGAGGGTGGATCTGAAATGTGTCCTTAGGCCATGTGCACCTGGCCTGAGACAATGATGGGAAAGCAGCGGCCTGGGGAACCCTGGAGTACACCTGCAGCATCTGTGAGCAGGCCTGGCTGTGGCCGCGCAGGCTCTCCCACACGATGAACGCCCAGAACCCTGGGACAGGGCTGTCCATTCTCCAGGTGCTAGAACAGAGACACAGACTTTAAATGCAAAGCCCATCAGCCTGAGAGCTCGGAGGTGCTTCTCCCGAGAGGGCAGAGCCAGGCACAGCCCAGTGAGGTCCAGGAAAACCCACCTGCCCCTGTAATTTCTTCTGCCACAAATGTGCTGTGAGTGGTTTGGATGTGAGAACCCTACAGGCAGCATAGAGAACCAGGCTTCTGGTAAGAGACAGGCCAGGAGTGAATCCAGCTCAGCCAACTGCTTGCTCCGTGGCCTTGGGCAAGTTACCTGCCCTCTCTGGGCCTGTGAACTCATATGGGAAACAGCAATGAGAAGTAACCAGCTCTGAGGATATAGAATCATAGTGCAATTAAAGCAGCTCAGGACAATGAATGCCCCCAAATTGCTACGGGTCCTATACACATTTGACCATTTTTACAAAGACAAGCCTCTGTCATGTGCCTGGGTTTGCTACGGGTCCTATACACATTTGACCATTTTTACAAAGACAAGCCTCTGTCATGTGCCTGGAAGGGTTTGTTCATTAAAGGAAATCTGAAATTAAATGTTCCTCTTCCAGGAGCACTCCTGTTTTAATGATATCAGTGACAGCTCTCAAAATCAGTAGACTTTAGGCTAGGCATGGTGGCTCACTCCTGTAATCCCAGCACTTTGGGAGGTTGAGGAGGGCAGATCACTTGAGGTCAGGAGTTCGAGACAAGCCTAGCCAACATGTTGAAACCCTGTCTCTACTAAAAATACAAAATTAGCTGGGCGTGGTGGCACACGCCTCTAATCCCAGGTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACTCAGGAGGCGGAGGTTGCAATCAGCCAAGATTGCCCCACTTCACCCCAGCCTGGGCAACAGAGCAAGACTCCATCTTAAATATATATATATATATAATATATATGTTATATAATATATAATATATATGTTATATTATATATGCTATATATTATATTATATAAAATATATAACATATTATATTATATAAAATATATATTATATAATATATTATATAATATATATATATTAAATATATATTATATTATATATTATAATATATATAATATATTATGTTATATATTATATTATATATGTTATAATATATAATATAATATATAACATATTATATGTTATATATATTATATTATATTATATAAAATATAATATATTATATATTATGTTATATAATATATATTATATTTATATTATATAATATATTATACAACATAATATATTATGTTATATAATATATTATATATTATATAACATAATATATAATATAATATATATTATATAACATAATATATTGTTATATATTATATGTTATATATTATATTATGTTATATATTATTATATATAACATATTATATGTTATATATATTATATAATATGTTATATAATATATTATATAATATATTATGTTATATAATATATTATATATATTATGTTATATAATATATTAAATTATATATTATGTTATATAATATATTAAATTATATAATATATTATGTTATATATGTTATATATTATATATGTTATATTATATATGTTATATATGTTATATAAGATGTTATATAAGATATAGTATATGTTATATTATATATGTTATATAAGATATAGTATATGTTATATTATATATGATATACATTTATAATATATGATATATGATATATTATTTATAATATATAATACATATTATATATTTATAATTTATATATTATATTATATATAATTATGTAATATATAATTTGTTATATAATTATGTAATACATAATTTATTATATATAATATATAATATAAATATATATAAATATATTATATATAATAATATATATATCATTAGACTTGGAGTTAAGCAGATGATTCTCCATAATATTGAGTGGGCCCCATCCAATCAGTTGAAGGCCTTAAGACTGAGGTCCCCTGAGAAGGATGAGATCCTGCTAGAGATGGACTTGAGACCCGCACTGTGGCATTTACTGGGCCACTTGGCAGGGTAAATGTGAGCACTTATGAGGATGATCTGGGAGGCAGGCGGCACTGTCCGCTGCTCCTGCAGGCCCGTGCAGGGCACCCGCACCCATCCCTTATCTGCTCCGTCCCTTATCATCTGATAGGCACAAGGGCCCTGCAGATGAATGAGAGGAGGCTCGCGAAGGCAAAGTTGCTTCACATTATCACTGAGAATCTTTAGCAGGGGAGAAAATGGCTTTCCGGGCCTTTCATGAACAGGCAGCAGACCACCAGAGGGCAGTGAACGCACCTGGCTGGCTTTCCAAACCCTGCTCCACATTTTCTAAGCTGAGGTGGGAGCAGGTGCACTGCCCCAGAGCTCAAGCCTCCAAGGTACCAGTGCAGCTGCACAGGCTCAGGCCCCGGGACCAAGGTGGCCGGGTGGCTCTGGGACAGCCAGGCTCTGAATGCAAAGCGCAGGGCCTCAGGGACAGAACCTGGCCCTTTGCAGGCCAGGAGTCACAGCTGAGAGCTGCAGTGAGTGACTGATGGTCAGGGCTCCTGCCAGCCTCCACCGTTACCTCCATCCCAGGGCCAGCTGGAGAGATGGGCCCGGAGACATTTGCCTGGTTGGGAGAGAGGGCAGGAAAAAGGAAAAAGGAGGGGTGTGGGAGGGGAAAGGACGGAGCTCCAGGAATCCCCAAAGTTGAGACACAGGGGCTATTCTGGCAAAAGGGCTGGCGGCTGGATTCAGGACTCTGTGAACTACTCCACGTTTAAGGAGGTTTTAGCCTGCATCACACCTTCAGAGCTCAACAGGAAAACAGCAATGCAACCAGAGCACTGTGATGTCTAAAGGGAAGACATGTCTGGAAAACACAAATTCAAGCAGGCATTCTCACAGAGAACAAGCGAGCTTCGGGTCCCATACGCATTTAGCTGGTTTTGTTGTTGTTGTTGTTGTTGTTGTAGTTTTGCTCTTATTGTCCAGGCTGAAGTGCAGTGGCGCAATATCGGCTCACTATAACCTCTGCCTGCTGGGTTCAAGCGATTTGCACGCCTCAGCCGCTCAAGTAGCTGGAATTACAGGCGTGGTACCTCCACACTTGGCTAATTTTTGTATTTTTAGTAAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTGCTGGCCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGAACCTGGCTGCATTTGACTATTTTTACAAAGAGACGCCTCTGTCCTGTGCCTGGAGGACTCATTCACTAAAGGAAACCTGAATTTAAACCTTCCTCTTCCTTGGGCGCTCCTGTCTTCATGAAGTCAGTGACTGCTCTCAAAACCAGTAGACTAAATTGATGATTCTCCATAATGTGGGTGGGCCCCATCCAATCAGTTGGAGGCCTCAAGAGAAAAAAGACTGAGGTCCCCTGAGGAGGAAGAGATTCTGCCAGAGACAAACAGGATCCCCGCAGCGGCATCAACTCTTCCTGGGTCTCCAGCCTGCCCTGCAGATTTTGGACTTGCAGCTCCACCACTGCATGAGCCAATTCTTCAAAATACTATTTTAAAAAATTCTGTATCTGTACACACACACACATGCATGCATGTGCACACCCTATTGGTTCTGTTTTTCTGGAGAACTCATCACACCTGAACACACAAACAACATTGAGTGGTTTCTATGGTGTCATCCAGCGACATCAAATGACAGTTCTGTTCACGTGAATCACCGACTTTGAGTTGACTGAGAACAAGACTCATTATCTATTTGGCCAGGCGGGAGGGACGTCCCCAACGTCCATGTCTCTTAGAGACTCACAACTCAGCCTTGTCCCCTGGGGCCGGCAGCTGTTCGGTGGAGACCCTGTGAGACTCGAGAAAGATGTGGGTGTTCAGGGTTCCATGACTCCCGCCCCTCGCCCAGCCATGTTTGCTGGTAGAAATGTCTCGTGGGTGACTGCACCACCCCACCAGGGGCCTCCCCTCATCCTGAACTTGACCTTGTGGGTGACTGCACCACCCCACCAGGGGCCGCCCCTCATCCTGAACTTGACCTTGTGGGTGACTGCACCACCCCACCAGGGGCTGCCCCTCGTCCTGAACTTGACCTTGTGGGTGACTGCACCACCCCACCAGAGGCCTCCCCTCGTCCTGAACTTGACCTTGTGGGTGACTGCACCACCCCACCAGAGGCCTCCCCTCGTCCTGAACTTGACCTTGTGGGTGACTGCACCACCCCACCAGGGGCCTCCCCTCATCCTGAACTTGACCTTGTGGGTGACTGCACCACCCCACCAGGGGCCGCCCCTCGTCCTGAACTTGACCTTGACCTCAAATCAGCCTAGTGAGTTTTAAAAACCAAGCTCATTAGCGCTTTGGCAGTCCCAAGAACTGCCCTTTTCCAAGCAGGTCACCTTGGAAGCTTGGGACAGCTCCCAACACAGCTGAGATTCTCCTTCGGGAGCTGCCTCTTCCACATCCTCAACAGGAGCCGAAGCTCACGCCATGCAGACGGGCTTGGCCTCAAAAACACCAGCACAGAGCTGACAGCCAAGCGCAGCAAGGAGAGGAGACGGGCAGAGGAACGGGGCCATGTCTCAGGGCGTGAGCGTCTGCATGGCCACTGCATGAGCACCAGTGCCCAGAAACACAGAACACTGTCAGGCCTGCTCAGAAGCATGTCCACGCACATGTGGACCTGTATGTACAAGCGTGCGTGCGAGTGTGTGTGTGTGTGTAATTTATGTTCGTCTTTCTATCTCATGTCTGGTTTCCCCCCACAGGAACACCAGGGGCTTGCATCAGGCATTTCTGTTCACTGCTGCAGGCTGTGTATTCAGGACACCGAGACACATGGCTGGGGCTCACACCCAGTAGACGACGTTTGTGGCTGATGAGCACCCATTAGCAGTGGGTGGGGTCTGTGGTGCACCCGGAATGGCTGGAAGTGGGTCAGGCGTGAAGAGGCGAGCGTGGTCAGGCCAGGAGACCTCTTGGGGACCCCCTGAAACAGCTCAGACACAAATGAGGAGGGGGCCAGGGAATGAGCGTGGCCAGGGCCAGATGCTGTGGAGAGGCTCAGAAGGGCCAGGCCTGACACTGACACACAGCCGAGGGATGGCAGGGCCATCTGGGGCTGGAACCGTTGGTTGACAAAGGGGGAAGAGGTCAAGGGGAGGAAGGAGGAGGGAACAAGGACAGAAACACTGGCGAGTTTCCACCAGGGACAAAGCGAGGGCAGGGCAGGAGACTGAGGAGGGGAAGCAGCTCCCCCAACCCAAAAATCTCCGAGTGCTGTGCAAGAATTCACCTGCTGCTTCCACATTCAGGATATATCAGTCAGGGTTCTACAGAGACACAGAACGTGTGTGTGTGTGTGTGTGTGTGTATCCTGCTGCTTCTACATTCAGGGTGTATCAGCCAGGGTTCTCCAGAGAAACACAACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTCCTGCTGCTTCTACATTCAGGGTGTATCAGCCAGGGTTCTCCAGAGAAACACAACCTCTGTGTGTGTGTGTGTGTGTGTGTGTCCTGCTGCTTCTACATTCAGGGTGTATCAGCCAGGGCTCTCCAGAGAAACACAACCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCCCTGCTGCTTCTACATTCAGGGTGTATCAGCCAGGGTTCTCCAGAGAAACACTACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTGCTGCTTCTACATTCAGGGTGTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2002:HG4_PB_SVrefine2Falcon1Dovetail_7605:HG3_PB_SVrefine2Falcon1Dovetail_7572:HG2_PB_SVrefine2Falcon2Bionano_6073:HG3_PB_SVrefine2PBcRDovetail_5843:HG2_PB_SVrefine2PBcRplusDovetail_1908:HG4_PB_SVrefine2PBcRDovetail_6276;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_1908;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00215095;ClusterMaxSizeDiff=0.00212534;ClusterMaxEditDist=0.00625408;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=39093;DistBack=3793;DistForward=69;DistMin=69;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=75;REFWIDENED=11:70801539-70801613;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=942.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:19:0:18:1/1:0:9:0:20:./.:3:19:1/1:0:512:.:39362:.
chr11	126291372	HG3_Ill_SVrefine2DISCOVARDovetail_9316	C	CCAGTCTTGCCTTCCTAATGGAGCTGTGCTTGTCCTCGCCCGGCCTGCCCCAGAGCGCATGCTAGCA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2191:HG2_PB_PB10Xdip_5136:HG2_PB_pbsv_12745:HG3_PB_HySA_19264:HG2_PB_HySA_23198:HG3_Ill_Krunchall_17045:HG3_Ill_GATKHC_20337:HG3_Ill_250bpfermikitraw_16569:HG3_Ill_150bpfermikitraw_16100:HG2_Ill_250bpfermikitraw_17032:HG2_PB_assemblyticsPBcR_4851:HG3_PB_SVrefine2PBcRDovetail_6007:HG3_PB_pbsv_12427:HG3_Ill_SVrefine2DISCOVARDovetail_9316:HG2_PB_SVrefine2PB10Xhap12_9188:HG2_PB_SVrefine2Falcon2Bionano_6253;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2191:HG3_PB_SVrefine2PBcRDovetail_6007:HG3_Ill_SVrefine2DISCOVARDovetail_9316:HG2_PB_SVrefine2PB10Xhap12_9188:HG2_PB_SVrefine2Falcon2Bionano_6253;NumExactMatchSVs=5;ClusterMaxShiftDist=0.203125;ClusterMaxSizeDiff=0.1875;ClusterMaxEditDist=0.299213;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=66;DistBack=25588;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=132;REFWIDENED=11:126291373-126291504;PctSeqSimilarity=0.9971;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-103;EndDistance=-103;GTMatch=0;TruScore=66;MatchId=1044.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:29:./.:11:24:10:8:./.:12:0:8:8:0/1:23:15:./.:.:.:.:.:.
chr11	134178005	HG2_PB_SVrefine2Falcon2Bionano_6292	T	TACCACCACCATCATCACATCACCACCACAATCACCATCATCACCAACACCACCACCAGCACCACCACCATCACCATCATCACCATCACCACTACCACCACCACCACCACCACCACCATCACCACCATCACCACCATCACCACCATCACCACCACCACCACCACCACCACCACCAAATACCACCACCACCACCACCACCACCACTACCACCACCATCACCATC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7834:HG2_PB_SVrefine2Falcon1plusDovetail_2235:HG2_PB_SVrefine2PBcRplusDovetail_2132:HG2_PB_SVrefine2Falcon2Bionano_6292:HG2_PB_SVrefine2PB10Xhap12_9238:HG3_PB_SVrefine2PBcRDovetail_6039:HG3_PB_SVrefine2Falcon1Dovetail_7797;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6292:HG2_PB_SVrefine2PBcRplusDovetail_2132;NumExactMatchSVs=2;ClusterMaxShiftDist=0.194093;ClusterMaxSizeDiff=0.194093;ClusterMaxEditDist=0.295359;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=222;DistBack=-505;DistForward=-1;DistMin=-505;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=245;REFWIDENED=11:134178006-134178250;PctSeqSimilarity=0.9451;PctSizeSimilarity=0.9189;PctRecOverlap=0;SizeDiff=18;StartDistance=-369;EndDistance=-369;GTMatch=1;TruScore=62;MatchId=1067.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:0:32:2:27:./.:9:154:14:177:./.:1:5:./.:.:.:.:.:.
chr11	134239323	HG2_PB_SVrefine2Falcon2Bionano_6293	G	GAGCGATCCTCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGCGAGCTGCTGCACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6293:HG4_PB_HySA_18625:HG4_PB_pbsv_12794:HG2_PB_HySA_23326:HG4_Ill_GATKHC_20545:HG2_Ill_GATKHC_20544:HG2_Ill_250bpfermikitraw_17100:HG3_Ill_GATKHC_20410:HG2_PB_assemblyticsfalcon_5069:HG3_PB_HySA_19344:HG4_PB_SVrefine2PBcRDovetail_6478:HG4_PB_SVrefine2Falcon1Dovetail_7835:HG4_Ill_SVrefine2DISCOVARDovetail_9134:HG3_Ill_SVrefine2DISCOVARDovetail_9357;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6293:HG4_PB_SVrefine2PBcRDovetail_6478:HG4_PB_SVrefine2Falcon1Dovetail_7835:HG4_Ill_SVrefine2DISCOVARDovetail_9134:HG3_Ill_SVrefine2DISCOVARDovetail_9357;NumExactMatchSVs=5;ClusterMaxShiftDist=0.101695;ClusterMaxSizeDiff=0.0826446;ClusterMaxEditDist=0.260163;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=60;DistBack=7089;DistForward=76;DistMin=76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=179;REFWIDENED=11:134239324-134239502;PctSeqSimilarity=0.9857;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-149;EndDistance=-149;GTMatch=0;TruScore=66;MatchId=1068.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:19:0|1:31:5:1:20:0/0:11:0:14:0:0/1:38:7:./.:.:.:.:.:.
chr11	134321717	HG3_PB_pbsv_12495	A	ATGCTGGTTTCAAGTGGTGTAAATACCCTCACACCATGGGACCTTGAGACCTTGGGGTTGGGGATGGGCCACGATGCTTGGTTATCAGTGGAGGTAAACCCTCCCCATGCTGACGCTGAGCTTGGGGTTGGGATGGGCAACGATGCAGGTTTTTCAGTGTGGTAAATCACCTCACCATGGCCTGACGCTGAGACCTTGGGTTGGGATGGGCACGATGCCTGGTTTCAGTGGTGTAAATTCCTCAAAATGGCTGACGCTGAGACCTTGGGGTTGGGATGGGCACGATGCCTGGTTCAGTGGTGTAAATACCCTCCACCAGGCCTGAAGCTGAGCACTTTGGGTTTGGGATGGGCACG	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7838:HG3_PB_pbsv_12496:HG3_PB_SVrefine2Falcon1Dovetail_7801:HG3_PB_pbsv_12495:HG2_PB_SVrefine2Falcon1plusDovetail_2239:HG2_PB_SVrefine2Falcon2Bionano_6297;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_12495;NumExactMatchSVs=1;ClusterMaxShiftDist=0.092219;ClusterMaxSizeDiff=0.0864553;ClusterMaxEditDist=0.21727;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=355;DistBack=110;DistForward=39;DistMin=39;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=426;REFWIDENED=11:134321366-134321791;PctSeqSimilarity=0.9688;PctSizeSimilarity=0.9859;PctRecOverlap=0.0028;SizeDiff=5;StartDistance=352;EndDistance=352;GTMatch=0;TruScore=65;MatchId=1069.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:25:0|1:30:4:1:21:./.:2:0:3:0:0/0:10:0:./.:2:3:.:.:.
chr11	134629300	HG3_PB_SVrefine2Falcon1Dovetail_7811	G	GTGCACAGAGCTCAGCCCGTGCACAGCAGGGACCTGTGTGTGCCATCGACTCCAATGTGACTGAGGACTTGGCAGTGTGTAGAGCTCAGCCCATGCACAGCAGGGCCCCGTGTGTGCCATCGACTCCAGTGTGACTGAGGACTTGGCAGTGTGCAGAGCTCAGACCGTGCACAGCAGGGACCTGTGTGTGCCATTGACTCCAATGTGACTGAGGACTTGGCAGTGTGCAGAGCTCAGCCCGTGCACAGCAGGGCCCCGTGTGTGCCATTGACTCCAATGTGAC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6305:HG2_PB_SVrefine2Falcon1plusDovetail_2251:HG4_PB_SVrefine2Falcon1Dovetail_7852:HG3_PB_SVrefine2PBcRDovetail_6051:HG3_PB_SVrefine2Falcon1Dovetail_7811:HG3_Ill_SVrefine2DISCOVARDovetail_9367:HG2_PB_SVrefine2PBcRplusDovetail_2144:HG2_PB_SVrefine2PB10Xhap12_9253;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6305:HG4_PB_SVrefine2Falcon1Dovetail_7852:HG3_PB_SVrefine2PBcRDovetail_6051:HG3_PB_SVrefine2Falcon1Dovetail_7811:HG3_Ill_SVrefine2DISCOVARDovetail_9367:HG2_PB_SVrefine2PBcRplusDovetail_2144:HG2_PB_SVrefine2PB10Xhap12_9253;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0070922;ClusterMaxSizeDiff=0.0070922;ClusterMaxEditDist=0.0141844;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=282;DistBack=39;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=996;REFWIDENED=11:134629301-134630296;PctSeqSimilarity=0.9428;PctSizeSimilarity=0.9504;PctRecOverlap=0;SizeDiff=14;StartDistance=-484;EndDistance=-484;GTMatch=0;TruScore=63;MatchId=1072.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:34:./.:4:26:12:11:./.:2:5:1:4:0/1:8:5:./.:.:.:.:.:.
chr12	4841475	HG4_PB_SVrefine2Falcon1Dovetail_7912	A	ATTGCTTGAGATGGTACACTGTGATTCTCCACCGGGAGGAGTGGCTAGAGATCTGTTCCTCTAGATGTCATCCAACCAACAAACACTTTTTCAGTATCTTCTGCTGCACTGTTCAATATGATAGCTACTAGTCACACATGGCTACTTAAATGTAAATTAATTAAAATTAT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2304:HG2_PB_pbsv_12916:HG4_PB_HySA_18758:HG2_PB_HySA_23466:HG2_PB_PB10Xdip_7480:HG2_PB_HySA_23465:HG3_PB_HySA_19464:HG4_PB_SVrefine2PBcRDovetail_6532:HG4_PB_SVrefine2Falcon1Dovetail_7912:HG2_PB_SVrefine2PBcRplusDovetail_2197:HG2_PB_SVrefine2PB10Xhap12_9317:HG2_PB_SVrefine2Falcon2Bionano_6352;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2304:HG4_PB_SVrefine2PBcRDovetail_6532:HG4_PB_SVrefine2Falcon1Dovetail_7912:HG2_PB_SVrefine2PBcRplusDovetail_2197:HG2_PB_SVrefine2PB10Xhap12_9317:HG2_PB_SVrefine2Falcon2Bionano_6352;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0632184;ClusterMaxSizeDiff=0.0574713;ClusterMaxEditDist=0.207865;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=169;DistBack=177;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=843;REFWIDENED=12:4841476-4842318;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.9941;PctRecOverlap=0;SizeDiff=1;StartDistance=-200;EndDistance=-200;GTMatch=0;TruScore=66;MatchId=1091.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:60:1/1:0:13:0:13:./.:0:0:0:0:0/0:15:0:./.:.:.:.:.:.
chr12	5252304	HG2_PB_pbsv_12919	T	TTTAATCCGATCACTCCACATCATCCGTTAATCCGATCCACCTCCACATTCATTCCGCTAATCCGGATCAACCTCACATCATCGCGTAATTCGATCCCTCCACTCATCCGTAATGCCGATCACCTCCACAATTCATCCGTAATCGATCACCTCCACATCATCCG	10	PASS	ClusterIDs=HG2_PB_pbsv_12919:HG3_PB_HySA_19466:HG4_PB_SVrefine2Falcon1Dovetail_7915:HG4_PB_pbsv_12901:HG4_PB_HySA_18761:HG3_PB_pbsv_12605;NumClusterSVs=6;ExactMatchIDs=HG2_PB_pbsv_12919;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0815047;ClusterMaxSizeDiff=0.0815047;ClusterMaxEditDist=0.334347;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=163;DistBack=10;DistForward=93;DistMin=10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=66;REFWIDENED=12:5252239-5252304;PctSeqSimilarity=0.9623;PctSizeSimilarity=0.9571;PctRecOverlap=0;SizeDiff=7;StartDistance=-224;EndDistance=-224;GTMatch=0;TruScore=63;MatchId=1092.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:32:0|1:29:6:1:34:./.:8:0:2:0:0/0:15:0:./.:.:.:.:.:.
chr12	6041692	HG2_PB_SVrefine2PBcRplusDovetail_2204	T	CAGACGAGTGAGGAAAGAAGGTAGACTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGTAGACGAGTGAGGAAAGAAGGTAGAGTAGTAAGGAAGGAAGACTGGTAAGAAAGTGACTAATAAGGAAAGAAGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2311:HG2_PB_SVrefine2PBcRplusDovetail_2204:HG2_PB_SVrefine2PB10Xhap12_9325:HG2_PB_SVrefine2Falcon2Bionano_6358;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2311:HG2_PB_SVrefine2PBcRplusDovetail_2204:HG2_PB_SVrefine2PB10Xhap12_9325:HG2_PB_SVrefine2Falcon2Bionano_6358;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=148;DistBack=-1;DistForward=0;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1230;REFWIDENED=12:6040650-6041879;PctSeqSimilarity=0.1978;PctSizeSimilarity=0.0556;PctRecOverlap=0.056;SizeDiff=-2515;StartDistance=161;EndDistance=161;GTMatch=1;TruScore=10;MatchId=1096.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:57:1/1:1:10:3:11:./.:0:0:0:0:./.:27:3:./.:.:.:.:2963:.
chr12	13678453	HG2_PB_SVrefine2Falcon2Bionano_6409	A	AGGGAAATGGAAATGCAGCAAAGGAAATTGAGAATGTAGTAGAGGGACATGGGAATACAGCAGAGGAAAATGGGGTTGCAGAAGTGGAAAACATGGGAATGCAGCAGAGGGGATTGCAGAGTAAGAAAATGGAATGCAGCAGTGGGAAATGGGAGTGCAGCAGTGGTAGATAGGATTGCAGCAGAGGGAAATGGAATGCAGGAGTGGGAAATGGGAATGCAGCAGGGGGAGATGGAACACAGGAGTGGGAAATGGGAATGAGGCAGAGGGAGACGGAATTCAGGAGTTGGAAATGGGAATGCAGGAGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2362:HG3_PB_SVrefine2PBcRDovetail_6124:HG2_PB_SVrefine2PB10Xhap12_9387:HG2_PB_SVrefine2Falcon2Bionano_6409:HG4_PB_SVrefine2Falcon1Dovetail_7958;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6409:HG2_PB_SVrefine2PB10Xhap12_9387:HG3_PB_SVrefine2PBcRDovetail_6124;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00325203;ClusterMaxSizeDiff=0.00325203;ClusterMaxEditDist=0.00325203;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=307;DistBack=18117;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1190;REFWIDENED=12:13678454-13679643;PctSeqSimilarity=0.9394;PctSizeSimilarity=0.8746;PctRecOverlap=0;SizeDiff=-44;StartDistance=-858;EndDistance=-858;GTMatch=0;TruScore=60;MatchId=1120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:0|1:20:5:6:22:./.:4:15:8:5:0/1:8:1:./.:2:4:.:.:.
chr12	25744074	HG3_PB_pbsv_12751	A	ACACTGAACAAGGTAGGATAAGACAGTCTTTAGTCACTGACACCAACCGTCCTCCAGTCCTGGCAGCAGCAAGTGTGGCTGAGGATGAGTGTTTCAGTGTGCGTGGAGAAGGAGATCACAGCAATTTGTTGAGGCACCTGAAACTCACTGTGCCTTATATACAGCAGAAAAAAAGGACCATCTCTATGATCGCCCATCATGGAGAGAAGCAATTAAAGTAGCCTATGCAGAGAGAATTCCCGTCTCACAGCAGTCCCGAACTTGAGTTCCCCAACAGCCTTGCCCCACTGCCGGCTAAAGTGCTCTGGGGCCCTTAAATAAACTTGAAAGATCGTCTGAGGCCATCAAGGGACTGCAACTCCTAGGTGAGTCCTAGTGCGGACTTGGTCCGCAGAGCAAGTGGACTACGGGGGGTCATGTGACTATCTGGAGAAAACCAAGCGAGGTGTCTAAGGGGTGCTAGCGCATCACACCCTCCTCTAGCCCCAGGCCTGCATAGCGTGTGGCTTAAACACATGACCCTTGCTCTCAGCTTGAGGAAGGAGAGGAAGAGTATGGAGGATTTGTCTGGCTATCTTGTTAACGTCAGCCCACAGCAGGATAGAGCTGTGATAGGCAGCTCGCCCACCAACAGGATAGAGCACCAGTAAGAGTTGTGAGGCACCCTTTCCAGGACTTAGCTCCAGTGAAAGGGAGCCCTGACGAGAAGGGAATTGCTGTTTGAAAGGGAGGGACCTAATCCTGGAAAATTCATCATTTGCTAACTGAAGAGCCTTGGTCCTGAATAACCAGCAGCAATACCCAGGTACTATGTTGCGGGCCTTGAGCTAAACTCTAACACTGGCTGGTTCTACAGTTAGGCGTGAGCACATGCTGCAATTGGCTACAGAGTGAGACTCCTTTACTTGAGAAAAGGTGAATGGAAACAAAGGAGACTTGTCTGTACTTAGGTACGCTGGCCACAAGCAGTACACGCACAAGCAGCTCTTGGGTCCAGATTTCAGGAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2405:HG3_PB_pbsv_12751:HG2_PB_pbsv_13069:HG2_PB_HySA_23738:HG3_PB_HySA_19670:HG2_PB_PB10Xdip_7062:HG3_PB_HySA_19669:HG2_PB_SVrefine2PB10Xhap12_9427;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_12751;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0434124;ClusterMaxSizeDiff=0.0333165;ClusterMaxEditDist=0.184908;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1006;DistBack=1;DistForward=22636;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=995;REFWIDENED=12:25743080-25744074;PctSeqSimilarity=0.9675;PctSizeSimilarity=0.9871;PctRecOverlap=0.2612;SizeDiff=13;StartDistance=737;EndDistance=737;GTMatch=0;TruScore=73;MatchId=1139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:60:./.:11:14:20:17:./.:34:0:33:9:0/1:51:13:0/1:47:15:.:672:.
chr12	54407845	HG2_PB_SVrefine2Falcon1plusDovetail_2496	C	CTCCCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCCTCCCTCTCCTCTCCCTCTCCCTCTCCCTCTCCTCTCCTCTCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTCTCCCCTCTCCTCTCTCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCTCTCTCTCTCTCTCCTCTCCCTCTCCCCTCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTCTCTCTGTCCT	10	PASS	ClusterIDs=HG2_PB_pbsv_13219:HG2_PB_SVrefine2Falcon2Bionano_6529:HG4_PB_pbsv_13218:HG2_PB_assemblyticsfalcon_5676:HG2_PB_SVrefine2Falcon1plusDovetail_2496:HG4_PB_SVrefine2Falcon1Dovetail_8049;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2496:HG2_PB_assemblyticsfalcon_5676;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0910384;ClusterMaxSizeDiff=0.0881935;ClusterMaxEditDist=0.234965;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=335;DistBack=25;DistForward=4701;DistMin=25;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=96;REFWIDENED=12:54407750-54407845;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1185.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:./.:13:26:14:1:./.:7:1:2:1:./.:18:1:0/1:10:8:.:.:.
chr12	55727214	HG2_PB_SVrefine2PB10Xhap12_9543	T	TTGTGGGGAAAAGCAAGAGAGATCAGATTGTTACTGTGTCTGTGTAGAAAGAAGTAGACATAGGAGACTCCATTTTGTTATGTACTAAGAAAAATTCTTCTGCCTTGAGATTCTGTTAATCTATAACCTTACCCCCAACCCCGTGCTCTCTGAAACGTGTGCTGTGTCAACTCAGAGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCTTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAAAACTGCGGAAGGCCGCAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGTCTAAAATATGGCCTCGTGGGAAGGGAAAGACCTGACCGTCCCCCAGCCCGACACCCGTAAAGGGTCTGTGCTGAGGAGGATTAGTAAAAGAGAAAGGAATGCCTCTTGCAGTTGAGACAAGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCGGTATAAAACCCGATTGTATGCTCCATCTACTGAGATAGGGAAAAACCGCCTTAGGGCTGGAGGTGGGACCTGCGGGCAGCAATACTGCTTTGTAAAGCACTGAGATGTTTATGTGTATGCATATCTAAAAGCACAGCACTTAATCCTTTACATTGTCTATGATGCCAAGACCTTTGTTCACGTGTTTGTCTGCTGACCCTCTCCCCACAATTGTCTTGTGACCCTGACACATCCCCCTCTTCGAGAAACACCCACAAATGATGAATAAATACTAAGGGAACTCAGAGGCTGGCGGGATCCTCCATTATGCTGAACGCTGGTTCCCCGGGTCCCCTTATTTCTTTCTCTATACTTTGTCTCTGTGTCTTTTTCTTTTCCAAATCTCTCGTCCCACCTTACGAGAAACACCCACAGGTGTGTAGGGGCAACCCACCCCTACATCTGGTGCCCAACGTGAGGCTTTTCTCTAGGGTGAAGGTACTCTCAAGCGTGGTCATTGAGGACAAGTCGACGAGAGATCCCGAGTACGTCTACAGTCAGCCTTACGGTAAGCTTGTGCGCTCGAAAGAAGCTAGGGTGATAATGGGGCAAACTAAAAGTAAAATTAAAAGTAAATATGCCTCTTATCTCAGCTTTATTAAAATTCTTTTAAAAAGAGGGGGAGTTAAAGTATCTACAAAAAATCTAATCAAGCTATTTCAAATAATAGAACAATTTTGCCCATGGTTTCCAGAACAAGGAACTTTAGATCTAAAAGATTGGAAAAGAATTGGTAAGGAACTAAAACAAGCAGGTAGGAAGGGTAATATCATTCCACTTACAGTATGGAATGATTGGGCCATTATTAAAGCAGCTTTAGAACCATTTCAAACAGAAGAAGATAGCATTTCAGTTTCTGATGCCCCTGGAAGCTGTTTAATAGATTGTAATGAAAAGACAAGGAAAAAATCCCAGAAAGAAACGGAAAGTTTACATTGCGAATATGTAGCAGAGCCGGTAATGGCTCAGTCAACCCAAAATGTTGACTATAATCAATTACAGGAGGTGATATATCCTGAAACGTTAAAATTAGAAGGAAAAGGTCCCGAATTAATGGGGCTATCAGAGTCTAAACCACGAGGCACAAGTCCTCTTCCAGCAGGTCAGGTGCCCGTAACATTACAACCTCAAAAGCAGGTTAAAGAAAATAAGACCCAACCGCCAGTAGCCTATCAATACTGGCCGCCGGCTGAACTTCAGTATCGGCCACCCCCAGAAAGTCAGTATGGATATCCAGGAATGCCCCCAGCACCACAGGGCAGGACGCTATACCCTCAGCCGCCCACTAGGAGACTTAATCCTATGGCACCACCTAGTAGACAGGGTAGTAAATTACATGAAATTATTGATAAATCAAGAAAGGAAGGAGATACTGAGGCATGGCAATTCCCAGTAACGTTAGAACCGATGCCACCTGGAGAAGGAGCCCAAGAGGGAGAGCCTCCCACAGTTGAGGCCAGATACAAGTCTTTTTCGATAAAAATGCTAAAAGATATGAAAGAGGGAGTAAAACAGTATGGACCCAACTCCCCTTATATGAGGACATTATTAGATTCCATTGCTCATGGACATAGACTCATTCCTTATGATTGGGAGATTCTGGCAAAATCGTCTCTCTCACCCTCTCAATTTTTACAATTTAAGACTTGGTGGATTGATGGGGTACAAGAACAGGTCCGAAGAAATAGGGCTGCCAATCCTCCAGTTAACATAAATGCAGATCAACTATTAAGAATAGGTCAAAATTGGAGTACTATTAGTCAACAAGCATTAATGCAAAATGAGGCCATTGAGCAAGTTAGAGCTATCTGCCTTAGAGCCTGGGAAAAAATCCAAGACCCAGGAAGTACCTGCCCCTCATTTAATACAGTAAGACAAGGTTCGAAAGAGCCCTATCCTGATTTTGTGGCAAGGCTCCAAGATGTTGCTCAAAAGTCAATTACCGATGAAAAAGCCCGTAAGGTCATAGTGGAGTTGATGGCATATGAAAACGCCAATCCTGAGTGTCAATCAGCCATTAAGCCATTAAAAGGAAAGGTTCCTACAGGATCAGATGTAATCTCAGAATATGTAAAAGCCTGTGATGGAATCGGAGGAGCTATGCATAAAGCTATGCTTATGGCTCAAGCAATAACAGGAGTTGTTTTAGGAGGACAAGTTAAAACATTTGGAGGAAAATGTTATAATTGTGGTCAAATTGGTCACTTAAAAAAGAATTGTCCAGTCTTAAATAAACAGAATATAACTATTCAAGCAACTACAACAGGTAGAGAGCCACTTGACTTATGTCCAAAATGTAAAAAAGGAAAACATTGGGCTAGTCAATGTCGTTCTAAATTTGATAAAAATGGGCAACCATTGTCGGGAAACGAGCAAAGGGGCCAGCCTCAGGCCCCACAACAAACTGGGGCATTCCCAATTCAGCCATTTGTTCCTCAGGGTTTTCAGGGACAACAACCCCCACTGTCCCAAGTGTTTCAGGGAATAAGCCAGTTACCACAATACAACAATTGTCCCCCACCACAAGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTCTCTCTGCTTCCAGGGGAGCCCCCACAAAAAGTCCCTACAGGGGTATATGGCCCACTGCCTGAGGGGACTGTAGGACTAATCTTGGGAAATCAAGTCTAAATCTAAAAGGAGTTCAAATTCATACTAGTGTGGTTGATTCAGACTATAAAGGCGAAATTCAGTTGGTTATTAGCTCTTCAATTCCTTGGAGTGCCAGTCCAGGAGACAGGATTGCTCAATTATTACTCCTGCCATATATTAAGGGTGGAAATAGTGAAATAAAAAAAATAGGAGGGCTTGTAAGCACTGATCCGACAGAAAAGACTGCATATTGGACAAGTCAAGTCTCAGAGAACAGACCTGTGTGTAAGGCCATTATTCAAGGAAAACAGTTTAAAAGGTTGGTAGACACTGGAGCAGATGTCTCTATCATTGCTTTAAATCAGTGGCCAAAAAATTGGCCTAAACAAAAGGCTGTTACAGAACTTGTCGACATAGGCACAGCCTCAGAAGTGTATCAAAGTACTGAGATTTTACATTGCTTAGGGCCAGATAATCAAGAAAGTACTGTTCAGCCAATGATTACTTCAATTCCTCTTAATCTGTGGGGTCGAGATTTATTACAACAATGGGGTGCGGAAATCACCATGCCCGCTCCATTATATAGCCCCACGAGTCAAAAAATCATGACCAAAATGGGATATATACCAGGAAAGGGACTAGGAAAAAATGAAGATGGCATTAAAATTCCATTTGAGACTAAAATAAATCAAGAAAGAGAAGGAATAGGGTATCCTTTTTAGGGGCGGCCACTGTAGAGCCTCCTAAACCCATACCATTAACTTGGAAAACAGAAAAACCGGTGTGGGTAAATCAGTGGCCGCTACCAAAACAAAAACTGGAGACTTTACATTTGTTAGCAAATGAACAGTTAGAAAAGGGTCACATTGAGCCTTCGTTCTCACCTTGGAATTCTCCTGTGTTTGTAATTCAGAAGAAATCAGGCAAATGGCGTATGTTAACTGACTTAAGGGCTGTAAACACCGTAATTCAACCCATGGGGCCTCTCCAACCTGGGTTGCCCTCTCCGGCCATGATCCCAAAAGATTGGCCTTTAATTATAATTGATCTAAAGGATTGCTTTTTTACCATCCCTCTGGCAGAGCAGGATTGTAAAAAATTTGCCTTTACTATACCAGCCATAAATAATAAAGAACCAGCCACCAGGTTTCAGTGGAAAGTGTTACCTCAGGAAATGCTTAATAGTCCAACTATTTGTCAGACTTTTGTAGGTCGAGCTCTTCAACCAGTTAGAGAAAAGTTTTCAAACTGTTATATTATTCATTATATTGATGATATTTTATGTGCTGCAGAAACGAAAGATAAATTAATTGACTGTTATACATTTCTGCAAGCAGAGGTTGCCAACGCAGGACTGGCAATAGCATCTGATAAGATCCAAACCTCTACTCCTTTTCATTATTTAGGAATGCAGATAGAAAATAAAAAAATTAAGCCACAAAAAATAGAAATAAGAAAAGACACATTAAAAACACTAAATGATTTTCAAAAATTACTAGGAGATATTAATTGGATTCGGCCAAATCTAGGCATTCCTACTTATGCCATGTCAAATTTGTTCTCTATCTTAAGAGGAGACTCAGACTTAAATAGTAAAAGAATATTAACCCCAGAGGCAACAAAAGAAATTAAATTAGTGAAAAAAAAAATTCAGTCAGCGCAAATAAATAGAATAGATCCCTTAGCCCCACTCCAACTTTTGATTTTTGCCACTGCACATTCTCCAACAGGCATCATTATTCAAAATACTGATCTTGTGGAGTGGTCATTCCTTCCTCACAGTACAGTTAAGACTTTTACATTGTACTTGGATCAAATAGCTACATTAATCGGTCAGACAAGATTACGAATAATAAAATTATGTGGAAATGACCCAGACAAAATAGTTGTCCCTTTAACCAAGGAACAAGTTAGACAAGCCTTTATCAATTCTGGTGCATGGCAGATTGGTCTTGCTAATTTTGTGGAAATTATTGATAATCATTACCCAAAAACAAAGATCTTCCAGTTCTTAAAATTGACTACTTGGATTCTACCTAAAATTACCAGACGTGAACCTTTAGAAAATGCTCTAACAGTATTTACTGATGGTTCCAACAATGGAAAAGCAACTTACACAGGACCAAAAGAACGAGTAATCAAAACTCCATATCAATCGGCTCAAAGAGCAGAGTTGGTTACAGTCATTACAGTGTTACAAGATTTTGACCAACCTATCAATATTATATCAGATTCTGCATATGTAGTACAAACTACAAGGGATGTTGAGACAGCTCTAATTAAATATAGCATGGATGATCAGTTAAACCAGCTATTCAATTTATTACAACAAACTGTAAGAAAAAGAAATTTCCCATTTTATATTACTCATATTCGAGCACACACTAATTTACCAGGGCCTTTGACTAAAGCAAATAAACAAGCTGACTTACTGGTATCATCTACACTCATAAAAGCACAAAAACTTCATGCTTTAACTCATGTAAATGCAGCAGGATTAAAAAACAAATTTGATGTCACATGAAAACAGGCAAAAGATATTGTACAACATTGCACCCAGTGTCAAGTCTTACACCTGCCCACTCAAGAGGCAGGAGTTAATCCCAGAGGTCTGTGTCCTAATGCGTTATGGCAAATGGATGTCACGCATGTACCTTCATTTGAAAGATTATCATATGTTCACGTAACAGTTGATACTTATTCACATTTCATATGGGCAACTTGCCAAACAGGAGAAAGTACTTCCCATGTTAAAAAACATTTATTGTCTTGTTTTACTGTAATGAGAGTTCCAGAAAAAATCAAAACTGACAATGGACCAGGATATTGTAGTAAAGCTTTCCAAAAATTCTTAAGTCAGTGGAAAATTTCACATACAACAGAAATTCCTTATAATTCCCAAGGACAGGCCATAGTTGAAAGAACTAATAGAACACTCAAAACTCAATTAGTTAAACAAAAAGAAGGGGGAGACAGTAAGGAGTGTACCACTCCTCAGATGCAACTTAATCTAGCACTCTATACTTTAAATTTTTTAAACATTTATAGAAATCAGACTACTACTTCTGCAGAACAACATCTTACTGGTAAAAAGAACAGCCCACATGAAGGAAAACTAATTTGGTGGAAAGATAATAAAAATAAGACATGGGAAATAGGTAAGGTGATAACGTGGGGGAGAGGTTTTGCTTGTGTTTCACCAGGAGAAAATCAGCTTCCTGTTTGGATACCCACTAGACATTTGAAGTTCTACAATAAACCCATCGGAGATGCAAAGAAAAGGGCCTCCACGGAGATGGTAACACCAGTCACATGGATGGATAATCCTATAGAAGTATATGTTAATGATAGTGTATGGGTACCTGGCCCCATAGATGATCGCTGCCCTGCCAAACCTGAGGAAGAAGGGATGATGATAAATATTTCCATTGGGTATCGTTATCCTCCTATTTGCTTAGGGACAGCACCAGGATGTTTAATGCCTGCAGTCCAAAATTGGTTGGTAGAAGTACCTACTGTCAGTCCCATCAGTAGATTCACTTATCACATGGTAAGCGGGATGTCACTCAGGCCACGGGTAAATTATTTACAAGACTTTTCTTATCAAAGATCATTAAAATTTAGACCTAAAGGGAAAACTTGCCCCAAGGAAATTCCCAAAGAATCAAAAAATACAGAAGTTTTAGTTTGGGAAGAATGTGTGGCCAATAGTGTGGTGATATTACAAAACAATGAATTCGGAACTATTATAGATTGGGCACCTCGAGGTCAATTCTACCACAATTGCTCAGGACAAACTCAGTCGTGTCCAAGTGCACAAGTGAGTCCAACTGTTGATAGCGACTTAACAGAAAGTTTAGACAAACATAAGCATAAAAAATTGCAGTCTTTCTACCCTTGGGAATGGGGAGAAAAAGGAATCTCTACCCCAAGACCAAAAATAATAAGTCCTGTTTCTGGTCCTGAACATCCAGAATTATGGAGGCTTACTGTGGCCTCACACCACATTAGAATTTGGCCTGGAAATCAAACTTTAGAAACAAGAGATCGTAAGCCATTTTATACTATCGACCTAAATTCCAGTCTAACAGTTCCTTTACAAAGTTGCGTAAAGCCCCCTTATATGCTAGTTGTAGGAAATATAGTTATTAAACCAGACTCCCAGACTATAACCTGTGAAAATTGTAGATTGCTTACTTGCATTGATTCAACTTTTAATTGGCAACACCGTATTCTGCTGGTGAGAGCAAGAGAGGGCGTGTGGATCCCTGTGTCCATGGACCGACCATGGGAGGCCTCACCATCCGTCCATATTTTGACTGAAGTATTAAAAGGTGTTTTAAATAGATCCAAAAGATTCATTTTTACTTTAATTGCAGTGATTATGGGATTAATTGCAGTCACAGCTACGGCTGCTGTAACAGGAGTTGCATTGCACTCTTCTGTTCAGTCAGTAAACTTTGTTAATGATGGGCAAAAAAATTCTACAAGATTGTGGAATTCACAATCTAGTATTGATCAAAAATTGGCAAATCAAATTAATGATCTTAGACAAACTGTCATTTGGATGGGAGACAGACTCATGAGCTTAGAACATCATTTCCAGTTACAATGTGACTGGAATACGTCAGATTTTTGTATTACACCCCAAATTTATAATGAGTCTGAGCATCACTGGGACATGGTTAGATGCCATCTACAGGGAAGAGAAGATAATCTCACTTTAGACATTTCCAAATTAAAAGAACAAATTTTCGAAGCATCAAAAGCCCATTTAAATTTGGTGCCAGGAACTGAGGCAATTACAGGAGTTGCTAATGGCCTCGCAAATCTTAACCCTGTCACTTGGGTTAAGACCATTGGAAGTACTACGATTTTAAATCTCATATTAATCCTTGTGTGCCTGTTTTGTCTGTTGTTAGTCTGCAGGTGTACCCAACAGCTCCGAAGAGACAGCGACCATCGAGAACAGGCCATGATGACGATGGCGGTTTTGTCGAAAAGAAAAGGGGGAAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2498:HG2_PB_PB10Xdip_7528:HG4_PB_SVrefine2Falcon1Dovetail_8052:HG4_PB_SVrefine2PBcRDovetail_6625:HG2_PB_SVrefine2PBcRplusDovetail_2365:HG2_PB_SVrefine2PB10Xhap12_9543:HG2_PB_SVrefine2Falcon2Bionano_6531;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9543:HG2_PB_SVrefine2PBcRplusDovetail_2365;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00146234;ClusterMaxSizeDiff=0.00146234;ClusterMaxEditDist=0.0138982;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=8211;DistBack=-970;DistForward=-1;DistMin=-970;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=969;REFWIDENED=12:55727215-55728183;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9999;PctRecOverlap=0.9308;SizeDiff=-1;StartDistance=-567;EndDistance=-567;GTMatch=1;TruScore=97;MatchId=1187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:98:1/1:0:13:0:31:./.:0:0:0:0:./.:0:5:1/1:2:1055:.:.:.
chr12	56299647	HG4_Ill_250bpfermikitraw_17478	A	ATATATATATCTATTAGATATATATATATCTAATAGATATATATATTATTATATATATCTATTAGATATATATATTAT	20	PASS	ClusterIDs=HG2_Ill_breakscan11_4385:HG4_PB_pbsv_13222:HG4_Ill_GATKHC_21127:HG4_Ill_250bpfermikitraw_17478:HG2_Ill_GATKHCSBGrefine_8843;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8843:HG4_Ill_250bpfermikitraw_17478:HG4_Ill_GATKHC_21127;NumExactMatchSVs=3;ClusterMaxShiftDist=0.122699;ClusterMaxSizeDiff=0.110429;ClusterMaxEditDist=0.147239;PBcalls=1;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=77;DistBack=12;DistForward=11;DistMin=11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=26;REFWIDENED=12:56299646-56299674;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1188.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:10:./.:0:0:0:0:./.:0:3:0:3:0/1:9:39:./.:.:.:.:.:.
chr12	70522582	HG2_PB_SVrefine2PB10Xhap12_9589	C	CATATATAAATATATGTATAAGTATATACAAATATACATATATAAATATATGTATAAGTATATACAAATATACATATATAAGTATATGTATAAGT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8020:HG2_PB_PB10Xdip_7639:HG4_PB_pbsv_13295:HG2_PB_PB10Xdip_7638:HG3_PB_pbsv_12972:HG4_Ill_250bpfermikitraw_17564:HG2_PB_HySA_24159:HG4_PB_SVrefine2Falcon1Dovetail_8096:HG4_Ill_SVrefine2DISCOVARDovetail_9468:HG2_PB_SVrefine2PBcRplusDovetail_2403:HG2_PB_SVrefine2PB10Xhap12_9589:HG2_PB_SVrefine2Falcon2Bionano_6564:HG2_PB_SVrefine2Falcon1plusDovetail_2533:HG2_Ill_SVrefine2DISCOVARplusDovetail_2815;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2815:HG2_PB_SVrefine2Falcon1plusDovetail_2533:HG2_PB_SVrefine2Falcon2Bionano_6564:HG2_PB_SVrefine2PB10Xhap12_9589:HG2_PB_SVrefine2PBcRplusDovetail_2403:HG4_Ill_SVrefine2DISCOVARDovetail_9468:HG4_PB_SVrefine2Falcon1Dovetail_8096;NumExactMatchSVs=7;ClusterMaxShiftDist=0.202899;ClusterMaxSizeDiff=0.192308;ClusterMaxEditDist=0.328502;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=94;DistBack=-94;DistForward=5;DistMin=-94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=223;REFWIDENED=12:70522583-70522805;PctSeqSimilarity=0.9601;PctSizeSimilarity=0.8704;PctRecOverlap=0;SizeDiff=-14;StartDistance=-111;EndDistance=-111;GTMatch=0;TruScore=61;MatchId=1208.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:3:28:1:14:0/0:14:1:18:0:0/1:31:10:./.:.:.:.:.:.
chr12	80154701	HG3_PB_SVrefine2PBcRDovetail_6297	T	TGATCTTGGCTCACTGTAACCTCCGCCTCCCAGGTTCAAGAGATTTTCCTGTCTCAGCCTCCCAAGTAGCTGGGATTACAAGCATGTGCCACCATGCCCAGCTAATTTTTGTATTTGTAGTAGAGACGGTGTTTCACCATGTTGGCCAAGCTGGTCATGAACTCACGACTCAGGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCATGCTCAGCCAATATTAGCATATTCATAGTTCATATTTTAGGACTAATCTTGGAACTAATCAGTACTATGTATTTCAAATATCTTCTCCCATTATGTGACTTGTTTCATTTTTGTGTATGTTTTTTATGCAGAAAATTTTTAAAGTTGAATATAATATACTATATTAGTATTTTCCTTTATGGTCATCTTTGTGTTTTACTTAAATTTTTTTTACCTTACCCTTAGATCAAAAAGATAGCCTCCTACATTCTATTAAAAATGTTAAGGTTTTGCTTTTATTTGGGCTTGTAATTTGCCTGAAATTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGAGATAGAGATCCAATTTATTTTATTTAGATAACCAACCGTTCCAACCATTCTTCTCTAATCATTTATGATGTTACATCTGCTACTTATTAAGTTCTCATAAGTTCGAGTCTCTTTTGGAGTTCTGTATGCATTGTTTATTTTTGTATTATTGGGTTCAACATTGTTTAAAATACTATGATTTTATAATGTCTTGATAGTTTTCAGGGTAAAACTTCACTTTATCCTTAGTCTTCAAAATTGTCTTGGCTATTTTTGGCACTTAGCTCACTCATATAAACTCAAATTCTTCATTTCTAAGCAATAATGTTGTCCCTAAATCATTTAATTTTCCATTTTTGTAAGTATGTAGAAATGCAAGTGATTTTTGAATTTGACCTTGTATCCTGAGACCTTGATAAATTCATTCTTAGTTCTAGTAGTTGCTTTGTGGATTCCTTAGGATTTTTTGTGCAGACAATATGTCAGCTGAAAATACAGTTATACTTTTTCCTTTCAGATATTTATTTTTTGTTTTTTCTTAATACACTAGCTAGGACTGCCAACACCACGCTGAATGGAATGAGTAAGGGACTAAGAGGGGACCATCCGTTACTTGTTTCTGATCTTAGGAAGAAAGCATTTAATATTTCACCATTATGTTGGGTGTAGGTTTTTAATGGAGGGCCATTATCAGATTGAGAAAGTTTTTTATATTTCTAGTTTGCCGAGAGTTTTACATTATGAGTGGGTATTATAGCTGTTAAATGCTTTTTCTGGGCCTATTGAAATGCTCATATTTTATTTCCTTTACTATGTTAATATGAATTACATTGATTATCAAATGTTAAACCAACCTCTCAATTCTAGTATAAACCACATTTAATTATGATGATTTATCCTTTTTATATATTGGTTAATAGTGTTGAAGACTTTTGCATTTATGTTATTGAGGGATATTGGTTTGTAATTTTCTTGTAATGTCTCCATTAGGTCTTGGTATCAGGCTAATGCTGACCTTACAAAATGAACTGGGAAGTTCTGCCTCCTCCTTCATTTTTTGAAGAGTTTGCATGTAAAATGTTTTATTTCTTCCTTAATTTTGGGTAGAATTCAATATAGAAACCATCTAGACCTTTAGTTTTCTGTGAATCACAGCTATTTTAAAGTTTGTTTCTGATAAAACAGTTGTACTGTCACCTTGGACAAGCTGCAACTACATTTCTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTACAGTGGCACGATGTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACACCATTCTCCTGCCTCAATCTCCTGAGTAGCTGGGACCACAGGTGCCTGCCACCACACCCGGCAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTATAGGCTTGAGCCACCGCGCCCGGGCCAAGCTGCAACTACATTTCAAAGAATCTCATTCCCTGTTTAGTTCTGGATTAGTTGGCCAAAATCAAAATATGCATGAGATTTGGAAGGTAGAGTGAAATAGTAGCTAATATACTCTGATGGTCTTTGTGGTGAGAAGTGGTGAGATACAACTGCAGAGGTGCTGGTGGGTTCCAATCTGTCCTTGTACTTCCCTGCTCCATGTCCAACTTTTATTTCTAACTGCAGACCCTGTTGACCAATTATGACCCAAGACTCACTACCAAATGAAGTGACAGTATCTTCAAACAACTCTTCCAGCTTTCTTTTGCAGGCTCACTTCAGCAACTGGATATGCCTGGCTTCTCAATTTCCCTGACAAGCTCCAATTTGGCCAACTATACCTGTGCTTCAGAAGGGCTGGTTCATGACTTTTCTCTTATCCACCAGCTCACCCTTTCAGATCCTTACTTCTTCAGTTTCTTCCACAATTGTGTCAAATCTGTTGCTATAAATTCCTTATTTCATAATACTCACACTGGTTCTGCTTCCCTGATTGAACTTTAATAGAGATAACTAAAAAATTAAAATTTTCTATGGGTCTGTTTTAATTATCCTTTTTCCTTTCTGTTTTTACAGTCAGTTGGTTTTATCTCCTTGAATGCCTTGTCATTTTTTGATTGAATGCTGGACACTTTGTATCCAAATTTTAATAATTTTAGGGTCTGGATGATGCTATCTTCTTCCAAAATGATGGACTTTAACATCCAGCAGTGAGTTAGGGTAAGAACAGATCGTCTTAATCTTGTTCAGGATTGAGCAATTTCAGACTTTGTGATGGCTTACTTATTTTGGGTTTATGCTTTTCTTTTAGGGAATAGCCCTTCAAGGATCCCCACTTAAAAAAAAAAAAAAGCTGGTATTTAATGCAGTTCCTCCCCTTTGGCAGGCCATGAACTGAATGTTCTGAATCCCCACCCTGTGTGAGTGATAATACAGCTGCTCAGTTTTTCAGTCTCTTGGCCACTAGTTATAAATTGTCTTTGGGGAAAAGTGGTGCTGAATGTGTGGTTCACTTTTTTTGTGCTCCTCTTCTTTTTAGGATCCTGGTCCCGCAAGGCCTTGCTGCAAAACATTGGAAAAAATTATCTGTATTAAACCCAGTTATTTCCCTCTCATTCTCATCCAAACAGGATTTCACCCCCATCACTGTAGTTAAATTGCTCGTATTGCAATATCCAGTTGACAGTTCTCAGTCCTTATCTGGTAACAGCAATCATTGCTTCCTAGAAACATTTTCTTCACTCTCTAGGGCCTCAGTCTTCTTATTTTATTCCTATTTCATTGGCCAACCTTCATTATTTTTTGTTGGGTTCCTGTCTTCCTGATCTCTTAACATTAGACGACCCAGGCCCCAATCCTGGGACTTTTTTTTTTTTTTTTTTCTTTTTGAGATGGGGTCTCACTCTGTCGCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCTACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAAGTGTGCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAAAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCCCGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGCATTACAGGCATGAGCCACCGTGCCCAGCCCTTTACTCTCATTCAGTCTCATGAATTTCCCTATCAGGCATATGCTCAGGCTCCCAGATTTCTATCTCTGGCTTCTCTCTTCTGAACTCAACATTTTGACTTGGATGTTTAACAAATATTCACACTGATAAGCATCTCAAACTTAACATGTCCAAAACATAACTTCATACTTTCTACCACAAACTTGTTCTACTGTCTTCTAAGCTAATTGCAATTCCATCCTTCTAGTTACTAGGGCTATAATCCTGAACTCTCCTACTTCAAATCCAATCGTGTGGGCTCTACCTTCAAAATAGATTTAGAATCCTACCACTTCTCAGCACCTTCACTGTTATCTCCCTGGGCCAAGACACTGTTATCTCCCATATGGATTGCAGTAATAGTGTCCTAAGTAGTCTAAGGGAGATTCCTTAAAAACCTAAGTCAGATTATATTATTTTCTCAAATCCTTCAAATGGCTTCCAGTCTCAGATTAAAAACTTCAAGTACTTACGATGGTTTATAAGACCATACATAATCTTGCCTCCAAATATTCTTCTGGCCTCATCTCTCATACACTTGTCCTTGTTTACTTGGCTTCAGCCACATTGGCTTTCTTGCTATTTCTTAAAAATGCTTCTGCCCCCTGCCTTTGGGCATGCTGTTCCAAACAGACATAGTTGGAATGCTTTTTCCCAGAAATCTTGATGGATCACACTACCATTTCCTTCAGTCATATCAGTGATGCTTTCCTTAACCTATTTAAAACCAAAACCCTCCTCCCTAATATGCCCTTCCCCAACATTCCTTAGGCTTTTTCTTATCCCTACTTTTTCTCCAAGGACTTGTAATTCTCCCTATATTTTTTCTGCCTACATCCAATAGCATATAAGCTTCATTATGGTGGAGTTTTGTCAATTTTGTTCACTGCTTTATCCCTCGCACCTAGAGTAGCACCTGACACATAGTAGCACTCAATATTTGAATAACTCATCAATTTTCAATGGATTCTGATTAAATTTACAAGTCAATTCTAAACAAGCGGTGACATTTCAAGGTTTAAACTTCAGTGATCAGGTTCCTTTTAGGTGATATTCCTGTCATTGATTTTTTGCTTGCTTTTTGTCCTTCTTCTGGTTATAGCCCCCTTCTTTTTTGGGGGGGACTGTACATCCTTTATATCTTCTGGCAATGCTGCTAACCATAAAACTTTACATCTCCCTTGCTTTGAGTGGTAAATAGAAACCCAGGACTGATCAATCAGTACTCCATCTCCATGGAAAAACAGATTAGTTCAAGGGATTAAAATAGCTCATTTCCTGGGATTTCATATATTAGGTGTTGGGATAAGAAATTACTTCTTTCCTCTGCGGTTGTTAGTCATTCATAGTCCTAAGTTTTCTCCATTTTAGTAGGACAGATGAGGTCACTGCACAGAAGAGAAGAGAGGTGACACCCGATGGATTCTGTCTTGTCTAAGGACAGCTAGACCTCTGAACTTCCTGGTAACTTGAGCCAATATATTTTATCTATCCTCCCATCCCAAAATTTCTAGGTAATTTGAGTTTCTTCACTTGTAACTTGACAAGCATTGAATAATATATGCCTCATTTTAATAGTATAACCTTATCTCCCCCCAAACAAAAATCTCTTGTTCAGTTTCTTCTGTAGGGATTCCCTAAAAAAGATTTTTGAAGTGAATCTGCTCAACTTAAAATGAATTCATCTGATTAGGAACTTCTCCAATCCAGTTGTGGAGATTAAGGTCTTCCCTAGCATTTTTCAGATGGTGGGAGTGGTATCAGCAGAACATTCCAATATAGCTAGAGATTTGTTACCCCACTGATAATTCTTTTCACTCCTCACTAAAAGCCTTGAGAATTCTTTTTTTTTTTTCCAACCCTTAGTTCTACTTCAGCCCAGGTGATCTAGATTTGAAACCTATAGGCAAGTAGTTCTCAAACTTTAGCTTGCATCATAATCCCTTGGCGAGGTTGCTGAAAAAGACTGTTGGGGCCAGGTACAGAGGCTTATGCCTGTAATCCCAGCACTTCAGGAGGCTGAGGCAGGAGGACTGCTTGAGCCCAGGAGTTCGAGACCAGCCTAGGCAACATAGGGAGACCCTGTCTCTACAAAAAATAAAAAATTAGCTGGGTGTGATGATGTACGCCCAGCTACTCGGGAGGTTGAGACCTGGGTGGAGGATCCACCAGGAGGCCAAGGCTGCAGTGAGCTATGTTCACACCACTGCACACTACTTCAGCCTGGTAGAGGAAGACTCCTTCTCAAAAACAAACAACAAAAAAACAAAAAACAGTTGTGCTTCATCCTCAGTTTTTGATTCTGTAGGTTTGGGGTGTGGTCTGATAATTTGTATTTCTAACAAATTCCCAGATGATGCTGATGCTATTGGTCCCAAGATGACATTTTGAGAATTACTGATAGATTCATATGTTAATAATAGAAAGTGGTTATTTTCCTTTAATCCAAGTACTCAAGTAACTAGCAGTCCTGGCATATTTAGCTGCATAAGTCATGCAGCAAATGGATGCATATTTTAGAAGTAGTAGAGTCCCTACATCATGCTGTGCCATGGTAATGATGCACTTTATAGAATGCAGAAAGCTTGGGCCTCAAAGATAAGCAGCAGTTGTGTTGGTTTTCCTAAGAATTTAACCTTGCAAGAGATCTAGATTGTAGGACATTTGCCTCCCCACTTGGAATTTTTGGCTTTCTCTCTCTCTCTAGCAAGCAGAGAAGAGATGTAGGAGACTGGCTACTCTTTTCCTGATCAAATGTTAAGGGACTATCATCCAGCTACTTGTCTCATATGAAAAAATCTTTTTCTAATTTGATTTCCCGATACACTAGATTAGATTTGTTTGGAGGTGTATTTTTCCTTTGCCAGGGAATATGTAATATGATTGAACACATGATCTTTTATTTTTTAACTATTACTCGTGTTACCCAAGGTTTGATATCTATATGATCTCTTTTTTAACTAACTACTAACATAGAATACCTACATTTTAAGTTCTCACAAGTGATTTTACTAATGAACTCTATTTCCGTTCAGAAAAAAGACAATTGGTAGTGTAAGTTTCTAAATACAGTTTCTGGACCAACAATATCAACATCATCAGAGAACTTGACGGAAATGCAAATTCATGGGCCCCACTCCAGACACTCAATACTGACTTAGAAACAGGAGCAACCAAAATTGTGTCTGAACAAGCTTGCCAGGTGATTCAAGTTTGAAAACCACTGTTGCAGAGGAATAATTAAGCTAAACACTCCTAGGACAAGAAAGATGGTGAATATTACACACTGGGATGATATTACTATGATCCCTGTTGGAACGATAGCACAACATTTATGGAAGCACACCTCAATATTCTAGCTGAGACAATGCAGAGACAAATGAGGACAGTGTACGTTAAGTGTACAGACCAATAGTAAAATCCATGAGAAAAATCATTTTCTGAGAACTGCTCTAAAAATGTTTATTTTGCCCAATGAACTGATATGATTTTTTAATATAACAATGACATTTATAATCAATTTTCCTATTCCTAGCTTGGTTGCTTGGAGACTTTGAAAATGTTTTATATTTAAATGAATGTTTCCTCTAGGTGATTTAGCTTAGTTTTCTAGTATAATTATCCTTAACAACTTATATAATTCTTTTATTAAAAAATATTTATAGTTATACAGTATTTGTGGGTTTTATTAAGAAGAATTACAAATTCTTCTTGGGAAAAGGATATATAGATAAGGTTTTTGAGGGAGCAAGTCTAGCATATGGTCAATAAATATCTAAATGAAGTCCTGAGTTTAGCTCTCCTGTTGCCTCTCTGACTTTCTCTCCTATTACTCTACTTCTTGCTCACTCCAATATAACCATATTAACCTTACTGTTTCTCCAACATATGAGAATATCTGCACCTCAAGGCCTTTGCTTTTGTTCCTCTGCATGGAAATGGTGGTCTCCTAGACATCTGCATAATTTTTGTCCAACGTTTCTTGCAGTTTTGGCTCAGGTACTACATTCTCAGTGAGGCTTTCTCTAATTAGTTCTCCCTTCGCTCCTGAATTCTTTTCCTGGCCTAGTTTTTGCAC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6297:HG4_PB_SVrefine2Falcon1Dovetail_8132:HG3_PB_SVrefine2Falcon1Dovetail_8058:HG2_PB_SVrefine2Falcon2Bionano_6599;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_6297;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00292008;ClusterMaxSizeDiff=0.00241224;ClusterMaxEditDist=0.0148704;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=7881;DistBack=5282;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=8116;REFWIDENED=12:80154702-80162817;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1224.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:13:27:./.:9:11:2:3:./.:0:0:0:0:./.:0:0:1/1:9:207:.:.:.
chr12	86874204	HG2_Ill_SVrefine2DISCOVARplusDovetail_2888	A	AACATGTATGTATGTATACATATATAGATATGTACACATATACATATGTATGTATACATATATAGATATGTAC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2888:HG3_PB_HySA_20183:HG3_PB_assemblyticsfalcon_5939:HG2_PB_PB10Xdip_7908:HG2_PB_PB10Xdip_7907:HG4_PB_HySA_19506:HG4_Ill_Krunchall_18563:HG4_Ill_GATKHC_21417:HG4_Ill_250bpfermikitraw_17712:HG4_Ill_150bpfermikitraw_17049:HG2_Ill_GATKHC_21429:HG2_Ill_250bpfermikitraw_17911:HG2_Ill_150bpfermikitraw_16864:HG2_PB_HySA_24350:HG4_PB_pbsv_13379:HG4_PB_SVrefine2PBcRDovetail_6681:HG4_PB_SVrefine2Falcon1Dovetail_8157:HG4_Ill_SVrefine2DISCOVARDovetail_9545:HG3_Ill_SVrefine2DISCOVARDovetail_9676:HG2_PB_SVrefine2PBcRplusDovetail_2455:HG2_PB_SVrefine2PB10Xhap12_9651:HG2_PB_SVrefine2Falcon2Bionano_6621:HG2_PB_pbsv_13357;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2888:HG4_PB_SVrefine2PBcRDovetail_6681:HG4_PB_SVrefine2Falcon1Dovetail_8157:HG4_Ill_SVrefine2DISCOVARDovetail_9545:HG3_Ill_SVrefine2DISCOVARDovetail_9676:HG2_PB_SVrefine2PBcRplusDovetail_2455:HG2_PB_SVrefine2PB10Xhap12_9651:HG2_PB_SVrefine2Falcon2Bionano_6621;NumExactMatchSVs=8;ClusterMaxShiftDist=0.151899;ClusterMaxSizeDiff=0.151899;ClusterMaxEditDist=0.278146;PBcalls=13;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=72;DistBack=74462;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=203;REFWIDENED=12:86874205-86874407;PctSeqSimilarity=0.9757;PctSizeSimilarity=0.9474;PctRecOverlap=0;SizeDiff=-4;StartDistance=-110;EndDistance=-110;GTMatch=0;TruScore=64;MatchId=1235.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:71:./.:0:0:0:0:./.:4:0:1:0:0/1:32:21:./.:.:.:.:.:.
chr12	93844732	HG2_PB_SVrefine2Falcon2Bionano_6640	C	GCTGGTCTGAAACTCCTGACCTCAGGTGATCCACTCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCAGGCCCCGACTGCTTACTTTCTATGACAACTCCCTGAAAGCAACCCCAGATCACAACCTGGGCAATCTCTTCATTGTTTTGAACGTCCTATAATGGGTCATACTTGCACTCCCTCTAACACCATAATTTTCACATCTGGTTGCCTTTTCACAAGTGGTTCTCCACCCCATCTGCCTGATGGTTTCTTGCCCTCCTCCATGAATGTTATATGTAAAATGTTTATTTAAAAACAGAATGCTTGTTCCTTGGTACCACAAGGAAAAATTAGCATTCAGACAAAAATTCTCTCAACGAGGCAATTTTACTTTCTGCAGAAAGGGTGCTCCTCGCAGATGGAACAATGGTGACAGCACATCTGAACAAAGGAGGGAAGCAATTTTTATTCCTTATGCAGCTTGTCCTTGCTACTGTGTCCTGTCTCCATTGGCTGGAGCCAGACCTCACAGTCTAAACTGCACCCGATTGGTAACAGCTTAAAAACTTTTAAAAATAGGTAAAAGCAATGGAGAACAGAGGAAAAGAGGAAGTTGCTTACCAAAGGACTTAGAAAAGTAATAATATTCCCAAATAAGGAAGGGGCATAGGCTGCGAGCTGGGACATGCCTGTGAGCACGTCCAGCACAAATATCTTGGTTAAAGTACAAGGACATAGAAAGTACTATGTGCCTGTGAGCATGTCTAACAGCTACATAGGATAGGGCTTAACAGAGAGTTATTTGCACAAAGCAAGGAGGCTTAAAGGAAGTTAGTCTTTAAAAGAAATTATTATTTCTAACACTTATGATTTATTCTTTAACAAGAAGGGAAACTTTGAAGAGGAAACTTTTTACTTTCTACAGTGAAGTTTTCTCCATGTTCTCCAAAACACCTTGTTCATCATGTTCTAACAACAGTCACTTGTAATAATCTGTTTACCTGTCTCCTTCACCACATTGTGCACCCCTTTAAGGCAGGGAACACCATATTCTTCTTTGTTATGTGTTCAGCAGTAACATAATGGCTGCACACATTCTCTCCTTCCTGCCTTCACTCATTCTCTGCCTATGATGTATTATACTAGACCATCTATAGGAACTTTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGCTGCCCAGGCTGGAGCGCAGTGGTGTCATCATGGTTCACTGCAACCCCGACTTCCTGGGTTCAAACTATCCTCCCATCTGAGCCTCCTGAATAGCTGAAACCATAGGCACATACCACCATGACTGGCTAATTTTTGTTTTTTTTTTTTTTTTTTTGAGCCACCAGCCACCACACCTGGTTTAGGAACTAAATTTTTTTTAAATTTTTTTTTTAAAGATAGAGATGGGGTCTTGCTTTGTTGCCCAGGCTGGTCTCGAACTCCTAAGCTCAAGCGATCCTCTGGCCTTGGCCTCCCAAAGTGCTGGGTTCACAGGCATAAGCCACCATGCCTGGTCTAGGAAGTAAATTTTTTTTTAATGAACAAGGTAGGAAAGGTAGGATCTCTGATCTTGAATTTGCATTTTTTTTTCTTTTTTTTTTTGAGATGGAGTTTTGCTTTTGTTGCCCAGGCTGGAGTGCGATAGTGCGATCGCGGCTCACTGCAACCTCCGCCTCCCAGGCTCAAGCAATTCTCCTGCGTTAGCCTCCCAAGTAGCTGGGATTATAGGCATGTGCCACCACACCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTGCACCATGTTGGTCAGG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6335:HG2_PB_SVrefine2PB10Xhap12_9676:HG2_PB_SVrefine2PBcRplusDovetail_2471:HG2_PB_SVrefine2Falcon2Bionano_6640;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6640:HG2_PB_SVrefine2PBcRplusDovetail_2471;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00110589;ClusterMaxSizeDiff=0.00110558;ClusterMaxEditDist=0.00165883;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1809;DistBack=44680;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1897;REFWIDENED=12:93844733-93846629;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1247.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:50:0|1:19:4:5:21:./.:36:0:28:16:0/0:38:1:0/1:55:69:.:3588:.
chr12	111388585	HG2_PB_SVrefine2Falcon2Bionano_6692	A	ACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6692:HG2_PB_SVrefine2Falcon1plusDovetail_2652:HG3_PB_assemblyticsfalcon_6128:HG3_PB_SVrefine2Falcon1Dovetail_8158:HG2_PB_PB10Xdip_6542:HG4_PB_pbsv_13484:HG2_PB_SVrefine2PBcRplusDovetail_2523:HG2_PB_pbsv_13482:HG2_PB_SVrefine2PB10Xhap12_9741:HG3_PB_pbsv_13170;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6692:HG2_PB_SVrefine2PBcRplusDovetail_2523:HG2_PB_SVrefine2PB10Xhap12_9741;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0622568;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.316602;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=126;DistBack=39233;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=215;REFWIDENED=12:111388586-111388800;PctSeqSimilarity=0.9889;PctSizeSimilarity=0.9844;PctRecOverlap=0;SizeDiff=-2;StartDistance=-187;EndDistance=-187;GTMatch=0;TruScore=65;MatchId=1281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:67:1/1:1:9:0:15:./.:1:0:0:0:0/1:7:11:./.:.:.:.:.:.
chr12	121425790	HG4_PB_SVrefine2Falcon1Dovetail_8255	G	GTCCATCCATCCATCATCCATCTACCCACCCACCCACCAATCCATCCATCCATTCATCCAACCATCCATCCATCCATCATCCATCTACCCACCCACCCACCAATCCATCCATCCATTCATCCAACCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2686:HG3_PB_SVrefine2Falcon1Dovetail_8193:HG2_PB_HySA_24718:HG2_PB_pbsv_13546:HG4_PB_SVrefine2PBcRDovetail_6762:HG4_PB_SVrefine2Falcon1Dovetail_8255:HG4_PB_pbsv_13545:HG2_PB_SVrefine2PB10Xhap12_9787;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2686:HG4_PB_SVrefine2Falcon1Dovetail_8255:HG2_PB_SVrefine2PB10Xhap12_9787;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0787402;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.27907;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=126;DistBack=23834;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=512;REFWIDENED=12:121425791-121426302;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.9921;PctRecOverlap=0;SizeDiff=1;StartDistance=-273;EndDistance=-273;GTMatch=0;TruScore=66;MatchId=1307.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:23:./.:6:10:6:10:./.:2:13:2:2:./.:3:1:./.:.:.:.:.:.
chr12	122185155	HG2_PB_SVrefine2PB10Xhap12_9792	A	ACTGGGGTAGAAGGTGGGAGGCTGGGGTAGAAGGTGGGAGGCTGGGGTAGAAGGTGGGAGGCACTGGGGTAGAAGGTGGGAGGCTGGGGTAGAAGGTGGGAGGCTGGGGTAAAAGGTGGGAGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9792:HG2_PB_HySA_24728:HG2_Ill_GATKHCSBGrefine_9082;NumClusterSVs=3;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9792;NumExactMatchSVs=1;ClusterMaxShiftDist=0.176991;ClusterMaxSizeDiff=0.176991;ClusterMaxEditDist=0.196429;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=122;DistBack=-1005;DistForward=27;DistMin=-1005;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=33;REFWIDENED=12:122185154-122185189;PctSeqSimilarity=0.9681;PctSizeSimilarity=0.8197;PctRecOverlap=0;SizeDiff=22;StartDistance=-766;EndDistance=-766;GTMatch=0;TruScore=59;MatchId=1310.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:20:./.:1:1:3:2:1/1:1:7:0:7:./.:1:5:./.:.:.:.:.:.
chr12	124824392	HG2_PB_HySA_24770	C	CCCACATCCATCCATCCACCACGCAGCAACCTAACTTCCACTGACCCACACACCACCTACACCACCCA	20	PASS	ClusterIDs=HG4_Ill_GATKHC_21794:HG3_PB_assemblyticsfalcon_6261:HG2_PB_HySA_24770:HG2_PB_assemblyticsPBcR_6084:HG2_PB_pbsv_13577:HG4_PB_HySA_19837:HG4_PB_pbsv_13583;NumClusterSVs=7;ExactMatchIDs=HG2_PB_HySA_24770;NumExactMatchSVs=1;ClusterMaxShiftDist=0.186667;ClusterMaxSizeDiff=0.186667;ClusterMaxEditDist=0.351351;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=67;DistBack=85;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3;REFWIDENED=12:124824391-124824396;PctSeqSimilarity=0.9629;PctSizeSimilarity=0.859;PctRecOverlap=0;SizeDiff=-11;StartDistance=115;EndDistance=115;GTMatch=0;TruScore=60;MatchId=1315.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:19:./.:6:9:5:4:./.:46:11:29:1:0/0:14:0:./.:.:.:.:.:.
chr12	124847009	HG2_PB_SVrefine2PBcRplusDovetail_2570	T	TGGGGAAGCCCACCTCCCAGAAAGCCTGGCCCAGCTGCCCGGTGGTGAACAGGGGGAGCTCACCTCCCCAGAAAGCCTGGCCCAGCTGCCCGGTGGTGAACAGGGGGAACCCACCTCCCCAGACAGCCTAGCCCAGCTGCCTGGTGATGGACA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8217:HG2_PB_PB10Xdip_6670:HG3_PB_pbsv_13265:HG4_PB_HySA_19838:HG4_PB_pbsv_13584:HG3_PB_HySA_20497:HG2_PB_pbsv_13578:HG2_PB_HySA_24771:HG4_PB_SVrefine2PBcRDovetail_6778:HG4_PB_SVrefine2Falcon1Dovetail_8283:HG2_PB_SVrefine2PBcRplusDovetail_2570:HG2_PB_SVrefine2PB10Xhap12_9809:HG2_PB_SVrefine2Falcon2Bionano_6745:HG2_PB_SVrefine2Falcon1plusDovetail_2705:HG3_PB_SVrefine2PBcRDovetail_6432;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2705:HG2_PB_SVrefine2Falcon2Bionano_6745:HG2_PB_SVrefine2PB10Xhap12_9809:HG2_PB_SVrefine2PBcRplusDovetail_2570:HG4_PB_SVrefine2Falcon1Dovetail_8283:HG4_PB_SVrefine2PBcRDovetail_6778;NumExactMatchSVs=6;ClusterMaxShiftDist=0.06;ClusterMaxSizeDiff=0.04;ClusterMaxEditDist=0.250825;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=152;DistBack=22611;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=549;REFWIDENED=12:124847010-124847558;PctSeqSimilarity=0.9666;PctSizeSimilarity=0.9671;PctRecOverlap=0.0065;SizeDiff=5;StartDistance=-149;EndDistance=-149;GTMatch=0;TruScore=64;MatchId=1316.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:1:9:1:14:./.:1:0:1:2:./.:7:2:./.:.:.:.:.:.
chr12	127316464	HG4_PB_SVrefine2Falcon1Dovetail_8300	C	CCTCCTCCTTCTCCTTCTGTCCTCCTCCTCCTTCTCCTCCTCCTCCATCTCCTCCTCCTCCTTCTGTCCTCTCTCTTCCTCTTTCTCCTCCTCCTTCTCCTCCTCATTCTTTTCCTCCTCCTCCTCCTTCTCCTTCTTCTTCTCTCTCCTCCTTCTCCTCCTTTCTCCTCCTCCTCCTTCTCCTCCTTCTTCTCCTCCTCTTCCTCCTTCTCCTCCTCCTTCTCTTCCTCCTTCTCCTTCTCCTCCTCCTTCTCCTCCTCCTTCTCCTCCTTCTCCTCATCCTCCTTCTCCTCATCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTTCTCCTCGTCCTCCTTCTCCTCCTCCTTCTGTCCTCCTCCTCCTTCTCCTCCTCCTCCTCTCTCTCCTCTCTCCTCTTCTCCTCCTCCTTCTATCCTCCCTCCTTCCCTCTTCCTCCTTCTCCTCTTCCTCCTTCTCCTCCTCCTACTTCTCCTCCTCCTTCTCCTCCTCCGCCTCCTTCTCCTCCTCCTTCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCTCCTTCTCCTCCTCTCCTCTTCTCCTCCTCCTCTCCTTCCTCCTCCTTTCCCTCCTCCTCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTGTTCTCCTCCTCCTCCTCCTTCTTCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCCTTCTCCTCCTCTCATTCTTCTCCTCCTCCTTCTCCTCTTCCTTCTATCCTCCTCCTCCTTCTCCTCCTCCTCTTCCTTCTCCTCTTCCTTCTATCCTCCTCCCCTCCTCCTCCTTCTCCTCCTCCTCCTGCTCTCCTTCCTCTCTCCCCTTCTCCTCCTCCTTCTCTCCTCCTCCTCTCCTCTTCTCCTCCTCTCTTCTCCTCCTCCTCTTCTCCTCCTTCTCCTCTCCTTCTATCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCTCCTTCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCCTCTTCTCCTCCTTCTCCTCCTCCTTCTCTCTCCTTCTCTCTCCTTTCCTTCCTCCTCCTTCTTCTCACCTCCTTCTCCTCCTTCTCCTCCTCCTTCTCCTCCTTCTCCTCTCCTTCTCCTCCTTCTCCTCCTCCTTCCTCTCCTCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTTCTCCTCTCCTCTCCTCTTCTCCTTCTCCTCCTTCTCCTCCTCCTTCTCCACCTCCTTCTCCTCCTTCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCCTTCTCCTCCTCCTCCTCCTTCTTCTCCTCCCCTTCTCCTCTTCCTTCTATCTCCTCCCCCTCCTCCTCTCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCTCTCTCCTTCTCCTCCTTCTCATCCTCCTTCTCCTCCTTCTCATCCTCCTTCTCCTCCTTCTTCCTCCTCCTTCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCTCTTCTCCTCCTCCTTCTCCTCCTCCTCCTTCTTCTCCTCCTCCTCCTTCTCTCTTCTTCTATCCTCATCCTCCTTCTCCTCCTCCTCCTCCTTCTCCTCTTCCTTCTATCCTCCTCCCCCTCCTCCTCCTTCTCCTCTCTCCCTCCTTCTCCTCCTCCTCCTTCTATCTCCTCCTCCCTCCTTCTCCTCCTCCTCCTCCTCCTTCTCCTCCTTCTCCTCCTTTTCCTTCTATCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCTCTCCTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTTTCTCCTCCTCCTTCTCCTCTCCTCCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCCTCCTTCTCTCCTCTTCCTTCTATCCTCCTCCTCCTTCTTCTCCTCCTCCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCCTTCTCCTCCTTCTCCTCCCCTTCTCCTCCTCCTCCTTCTTCTCCTCCTCCTCCTTCTCCTCTTCCTTCTATCCTCCTCCCCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTTCTCCTCCTTTTCCTCCTTCTCCTCCTCCTTCTCCTCCTTCTCCTTCTCCTCTCCTCCTCTCCTCCTCCTTCTCCTTCTCCTCCTCCTCCTCTCCTCCTTCTCCTTCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCTCCTCCTCTTCCTTCTATCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCTCCTCCTCCTTCTCCTCCTCCTCCCTCCTTCTCCTCCTCCTCCTTCCTCCTCCTCCTCCTCCTCCTTCTCCTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTTCTCCTCCTCCTCCTCCTCTCCCTCCTCTCCTTCTATCCTCCTCCTTCTCCTCCTCCTCCTTCTCTTCCTTCTATCCTCCTCCTCCTCTCCTCCTCTTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTTCCTCCTCCTCCTTCTCCTCCTCCTCCTTCTCCTTCTT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6763:HG4_PB_pbsv_13614:HG3_PB_SVrefine2Falcon1Dovetail_8241:HG4_PB_SVrefine2Falcon1Dovetail_8300:HG2_PB_SVrefine2Falcon1plusDovetail_2724:HG3_PB_SVrefine2Falcon1Dovetail_8240:HG3_PB_pbsv_13295:HG2_PB_SVrefine2Falcon1plusDovetail_2723;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_8300;NumExactMatchSVs=1;ClusterMaxShiftDist=0.186266;ClusterMaxSizeDiff=0.185929;ClusterMaxEditDist=0.237875;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=2687;DistBack=-260;DistForward=-1;DistMin=-260;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=336;REFWIDENED=12:127316465-127316800;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1328.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:34:1/1:0:19:0:10:./.:12:1:9:2:./.:6:1:./.:20:327:.:3086:.
chr12	130863911	HG2_PB_SVrefine2PB10Xhap12_9866	C	CTTGACAGTTCCTTCAACTCCCTCATCCCAATTCCCATCCAAGCATTGACAGTTCCTTCAACTCCCTCATCCCAGTTCCCATCCAAGCATTGACAGTTCCTTCAACTCCCTCATCCCAGTTCCCATCCAAGCATTGACAGTTCCTTCAACTCCCTCATCCCAGTTCCCATCCAAACATTGACAGTTCCTTCAAATCCCTCATCCCAGTTCCCATCCAAGCATTGACAGTTCCTTCAACTCCCTCATCCCAGTTCCCATCCAAGCATTGACAGTTCCTTCAACTCCCTCATCCCAGTTCCCATCCAAGCATTGACAGTTCCTTCAACTCCCTCATCCCAGTTCCCATCCAAGCA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8280:HG3_PB_pbsv_13363:HG4_PB_pbsv_13671:HG3_PB_HySA_20642:HG4_PB_pbsv_13670:HG4_PB_SVrefine2Falcon1Dovetail_8339:HG3_PB_pbsv_13362:HG2_PB_SVrefine2PBcRplusDovetail_2619:HG4_PB_HySA_19952:HG2_PB_SVrefine2PB10Xhap12_9866:HG2_PB_SVrefine2Falcon2Bionano_6795:HG2_PB_SVrefine2Falcon1plusDovetail_2764;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2764:HG2_PB_SVrefine2Falcon2Bionano_6795:HG2_PB_SVrefine2PB10Xhap12_9866:HG2_PB_SVrefine2PBcRplusDovetail_2619:HG4_PB_SVrefine2Falcon1Dovetail_8339;NumExactMatchSVs=5;ClusterMaxShiftDist=0.186589;ClusterMaxSizeDiff=0.186589;ClusterMaxEditDist=0.335277;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=352;DistBack=6744;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=924;REFWIDENED=12:130863912-130864835;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9972;PctRecOverlap=0;SizeDiff=1;StartDistance=-469;EndDistance=-469;GTMatch=0;TruScore=66;MatchId=1343.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:35:0|1:15:1:2:28:./.:0:2:0:1:./.:2:4:./.:2:3:.:.:.
chr12	132111053	HG2_PB_SVrefine2Falcon2Bionano_6823	G	GCCGAGACCACAGCCACTCCCCTCTCCCCATCCACCCGAGACCACAGCCACACCCCTCTCACCATCCGCCCGAGACCACAGCCACTCTCTTCTCCCCATCCACCCGAGACCACAGCCACTCCCCTCTCCCCATCCACCCGAGACCACAGCCACTCCCCTCTCCCCATCCACCCGAGACCACAGCCACTCCCCTCTCCCCATCCACCCGAGACCACAGCCACTCCCCTCTCCCCATCCACCCGAGACCACAGCCACTCCCCTCTCCCCATCCACCCGAGACCACAGCCACTCCCCTCTCCCCATCCGCCCGAGACCACAGCCACTCCCTTCTCACCATCCGCCCGAGACCACAGCCACTCTCTTCTCCCCATCCGCCCGAGACCACAGCCACTCCCCTCTCCCCATCCGCCCGAGACCACAGCCACTCCCCTCTCACCATCCAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6823:HG3_PB_assemblyticsfalcon_6453:HG3_PB_SVrefine2Falcon1Dovetail_8314:HG4_PB_SVrefine2Falcon1Dovetail_8371:HG2_PB_SVrefine2Falcon1plusDovetail_2790:HG2_PB_SVrefine2PBcRplusDovetail_2649:HG2_PB_SVrefine2PB10Xhap12_9910;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6823:HG2_PB_SVrefine2PBcRplusDovetail_2649:HG2_PB_SVrefine2PB10Xhap12_9910;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0344432;ClusterMaxSizeDiff=0.0344432;ClusterMaxEditDist=0.190586;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=442;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1324;REFWIDENED=12:132111054-132112377;PctSeqSimilarity=0.9807;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-565;EndDistance=-565;GTMatch=1;TruScore=66;MatchId=1358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:24:0:19:./.:0:12:3:30:./.:0:1:./.:1:12:.:1916:.
chr12	133444920	HG2_PB_SVrefine2PB10Xhap12_9959	C	CAAAAAATTAGCCAGGCGTGGTGACGGGTGCCTGTAGTCCCAGCTACTCAGAGGCTGAGGCAGGAAAATGGCGTGGACCCAGGAGAATGGCGTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAAAACAAACAAACAAAAAACAAA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2834:HG2_PB_PB10Xdip_8145:HG3_PB_assemblyticsfalcon_6536:HG3_PB_SVrefine2Falcon1Dovetail_8360:HG3_PB_pbsv_13515:HG2_PB_HySA_25164:HG4_Ill_GATKHC_22052:HG4_Ill_GATKHCSBGrefine_9501:HG3_Ill_GATKHC_21951:HG3_Ill_GATKHCSBGrefine_9108:HG2_Ill_GATKHC_22075:HG2_Ill_GATKHCSBGrefine_9218:HG2_PB_pbsv_13819:HG4_PB_SVrefine2PBcRDovetail_6884:HG4_PB_pbsv_13800:HG4_PB_SVrefine2Falcon1Dovetail_8411:HG3_PB_SVrefine2PBcRDovetail_6531:HG3_PB_SVrefine2Falcon1Dovetail_8359:HG2_PB_SVrefine2PBcRplusDovetail_2687:HG2_PB_SVrefine2PB10Xhap12_9959:HG2_PB_SVrefine2Falcon2Bionano_6869;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2834:HG3_PB_SVrefine2PBcRDovetail_6531:HG3_PB_SVrefine2Falcon1Dovetail_8359:HG2_PB_SVrefine2PBcRplusDovetail_2687:HG2_PB_SVrefine2PB10Xhap12_9959:HG2_PB_SVrefine2Falcon2Bionano_6869;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0855615;ClusterMaxSizeDiff=0.0855615;ClusterMaxEditDist=0.30563;PBcalls=15;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=190;DistBack=11194;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=357;REFWIDENED=12:133444921-133445277;PctSeqSimilarity=0.9601;PctSizeSimilarity=0.9579;PctRecOverlap=0;SizeDiff=8;StartDistance=-239;EndDistance=-239;GTMatch=0;TruScore=63;MatchId=1375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:33:1/1:3:19:2:14:./.:1:1:1:1:0/1:9:2:./.:.:.:.:.:.
chr13	29161602	HG2_Ill_GATKHCSBGrefine_9285	G	GTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	20	PASS	ClusterIDs=HG2_PB_HySA_25363:HG2_PB_PB10Xdip_8709:HG3_PB_pbsv_13622:HG2_PB_PB10Xdip_8708:HG2_PB_assemblyticsPBcR_6454:HG4_Ill_GATKHC_22200:HG4_Ill_GATKHCSBGrefine_9579:HG2_Ill_GATKHC_22223:HG2_Ill_GATKHCSBGrefine_9285:HG2_Ill_150bpfermikitraw_17489:HG3_Ill_GATKHC_22117:HG3_Ill_GATKHCSBGrefine_9192:HG4_PB_HySA_20275;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17489:HG2_Ill_GATKHCSBGrefine_9285:HG2_Ill_GATKHC_22223:HG4_Ill_GATKHCSBGrefine_9579:HG4_Ill_GATKHC_22200;NumExactMatchSVs=5;ClusterMaxShiftDist=0.185185;ClusterMaxSizeDiff=0.185185;ClusterMaxEditDist=0.324324;PBcalls=6;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=51;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=125;REFWIDENED=13:29161503-29161627;PctSeqSimilarity=0.9256;PctSizeSimilarity=0.7391;PctRecOverlap=0;SizeDiff=-18;StartDistance=60;EndDistance=60;GTMatch=0;TruScore=55;MatchId=1397.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:34:./.:0:1:0:3:./.:5:16:2:5:0/1:7:26:./.:.:.:.:.:.
chr13	107436424	HG3_PB_SVrefine2Falcon1Dovetail_8726	T	TGGTGTGCCGTTCTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTACAGGTTAGTTACATATGTATACATGTGACATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCTCCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCAAGTGATCTCATTGTTCAATTCCCACTATGAGTGACAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTATGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTTGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCACGCCTATGTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGGTATGCGGCGTTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCGTTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCCCCCTCCCCCAGCCTCGTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCCGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACACTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCCAC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_8182:HG3_PB_assemblyticsfalcon_7414:HG2_PB_assemblyticsfalcon_7447:HG3_PB_SVrefine2Falcon1Dovetail_8726:HG2_PB_SVrefine2PB10Xhap12_10405:HG2_PB_SVrefine2Falcon2Bionano_7183:HG2_PB_SVrefine2Falcon1plusDovetail_3210;NumClusterSVs=7;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8726;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0072902;ClusterMaxSizeDiff=0.0072902;ClusterMaxEditDist=0.0144338;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=6034;DistBack=-1;DistForward=14;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=15;REFWIDENED=13:107436425-107436439;PctSeqSimilarity=0.1031;PctSizeSimilarity=0.0542;PctRecOverlap=0.0542;SizeDiff=5707;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=7;MatchId=1550.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:./.:0:4:0:14:./.:0:3:0:3:./.:0:7:1/1:7:428:.:5832:.
chr13	111962298	HG3_PB_SVrefine2Falcon1Dovetail_8760	T	TGTGTTGATGGTTAAAGGACTGCATGGAAAGGCATCAGTTCTCCTTGTTGATTGTTGGAGGACTGCATGGAAAGGCGTCAGTTCTCCGTGTTGATGGTTAAAGGACTGCGTGGAAAGGCCTCAGTTCTCCATGTTGATGGTTGGAGGACTGCATGGAAAGGCATTAGTTCTCTGTGTTGATGGTTAAAGGACTGCATGGAAAGGCATCAGTTCTCCGTGTTGATGGTTAGAGGACTGCATGGAAAGGTGTCAGTTCTCCGTGTTGATGGTTAAAGGACTGCATGGAAAGACATCAGTTCTCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10450:HG4_PB_SVrefine2Falcon1Dovetail_8807:HG2_PB_HySA_26391:HG3_PB_pbsv_14129:HG3_PB_HySA_21796:HG3_PB_SVrefine2PBcRDovetail_6827:HG3_PB_SVrefine2Falcon1Dovetail_8760:HG2_PB_SVrefine2Falcon1plusDovetail_3249:HG2_10X_SVrefine210Xhap12_10047;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10047:HG2_PB_SVrefine2Falcon1plusDovetail_3249:HG3_PB_SVrefine2Falcon1Dovetail_8760:HG3_PB_SVrefine2PBcRDovetail_6827:HG4_PB_SVrefine2Falcon1Dovetail_8807;NumExactMatchSVs=5;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.163121;ClusterMaxEditDist=0.358156;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=301;DistBack=2690;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=791;REFWIDENED=13:111962299-111963089;PctSeqSimilarity=0.9655;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-306;EndDistance=-306;GTMatch=0;TruScore=65;MatchId=1571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:./.:15:9:12:13:./.:0:0:2:0:0/0:10:0:./.:2:3:.:.:.
chr13	112283635	HG2_PB_SVrefine2PBcRplusDovetail_3067	A	ATGCAGAGACCTCAGGTGTGGGCTGGTCTAGCCTGGGACAGCTGCAGAGACCTGGGACATGGGCTGGTCTAGCCTGGGACAGCTAAAGAGACCTGGGGCATGGGCTGGTCTAGCCTGGGACAGCTGCAGAGACCTGGGGCATGGGCTGGTCTAGCCTGGGACAGCTGCAGAGACCTGGGACATGGGCTGGTCTAGCCTGGGACAGCTGCAGAGACCTCGGGCATGGGCTGGTCTAGCCTGGGACAGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3258:HG4_PB_pbsv_14448:HG3_PB_pbsv_14144:HG2_PB_PB10Xdip_8266:HG2_PB_pbsv_14481:HG2_PB_HySA_26414:HG4_PB_SVrefine2Falcon1Dovetail_8815:HG3_PB_SVrefine2PBcRDovetail_6836:HG3_PB_SVrefine2Falcon1Dovetail_8770:HG2_PB_SVrefine2PBcRplusDovetail_3067:HG2_PB_SVrefine2PB10Xhap12_10458:HG2_PB_SVrefine2Falcon2Bionano_7229;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3258:HG3_PB_SVrefine2PBcRDovetail_6836:HG3_PB_SVrefine2Falcon1Dovetail_8770:HG2_PB_SVrefine2PBcRplusDovetail_3067:HG2_PB_SVrefine2PB10Xhap12_10458:HG2_PB_SVrefine2Falcon2Bionano_7229;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0477137;ClusterMaxSizeDiff=0.0437376;ClusterMaxEditDist=0.232742;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=246;DistBack=9638;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=491;REFWIDENED=13:112283636-112284126;PctSeqSimilarity=0.9847;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-405;EndDistance=-405;GTMatch=0;TruScore=66;MatchId=1578.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:./.:0:3:0:1:./.:0:3:0:0:./.:5:3:./.:.:.:.:.:.
chr13	113687247	HG2_PB_SVrefine2PBcRplusDovetail_3092	C	CTGGCCCCCGTGACGTGAGTGGACCCCGTGATGTGAGTGGACCCTGTGACGTGAGTGGCCCCCGTGATGTGAGTGGCCCCCGTGACATTAGTGGACCCTGTGGCGTGAGTGGCCCCCATGACGTGAGTGGCCCCTGTGACATTAGTGGACCCCGTGGCGTGAGTGGCTGCCATGACGTGAGTGGCCCCCGTGATGTGAGTGGCCCCCGTGACATTAGTGGACCCCGTGGCGTGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3284:HG4_PB_SVrefine2Falcon1Dovetail_8849:HG2_PB_SVrefine2PBcRplusDovetail_3092:HG2_PB_SVrefine2PB10Xhap12_10490:HG2_PB_SVrefine2Falcon2Bionano_7255;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3284:HG2_PB_SVrefine2PBcRplusDovetail_3092:HG2_PB_SVrefine2PB10Xhap12_10490:HG2_PB_SVrefine2Falcon2Bionano_7255;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00854701;ClusterMaxSizeDiff=0.00854701;ClusterMaxEditDist=0.0128205;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=234;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=391;REFWIDENED=13:113687248-113687638;PctSeqSimilarity=0.9415;PctSizeSimilarity=0.8667;PctRecOverlap=0;SizeDiff=-36;StartDistance=-499;EndDistance=-499;GTMatch=0;TruScore=60;MatchId=1590.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:1:22:2:19:./.:1:1:0:2:./.:0:8:./.:.:.:.:.:.
chr13	114007199	HG4_Ill_SVrefine2DISCOVARDovetail_10272	A	ACACTCTAGGTAGGAGCCCACAGCTGAAAGCAGGGACCCAGTAGAATCCACACTCTGGGTAGGAGCCCACAGCTGAAAGCAGGGACCCAGCAGAGTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3299:HG4_PB_HySA_21171:HG3_PB_SVrefine2Falcon1Dovetail_8810:HG2_PB_pbsv_14551:HG4_PB_SVrefine2Falcon1Dovetail_8859:HG4_PB_pbsv_14525:HG3_PB_pbsv_14209:HG4_Ill_SVrefine2DISCOVARDovetail_10272:HG3_PB_SVrefine2Falcon1Dovetail_8809:HG2_PB_SVrefine2PB10Xhap12_10507;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3299:HG4_Ill_SVrefine2DISCOVARDovetail_10272:HG3_PB_SVrefine2Falcon1Dovetail_8809:HG2_PB_SVrefine2PB10Xhap12_10507;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0860215;ClusterMaxEditDist=0.294737;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=96;DistBack=521;DistForward=102;DistMin=102;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=421;REFWIDENED=13:114007200-114007620;PctSeqSimilarity=0.9634;PctSizeSimilarity=0.9375;PctRecOverlap=0;SizeDiff=6;StartDistance=-111;EndDistance=-111;GTMatch=0;TruScore=63;MatchId=1595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:29:./.:12:23:12:4:./.:3:1:3:0:0/0:13:0:./.:.:.:.:.:.
chr13	114180350	HG2_PB_SVrefine2PB10Xhap12_10521	A	CTGTGCCGGTTATTCTAGAACAAGCCGTCGTCGTCGTAGGAGACGACAGCTCTGTGCCGGTTATTCTAGAACAAGCCGTCGTCGTCGTAGGAGACGACAGCTC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8433:HG3_PB_assemblyticsfalcon_7632:HG4_PB_assemblyticsfalcon_7525:HG4_PB_SVrefine2Falcon1Dovetail_8868:HG3_PB_SVrefine2PBcRDovetail_6878:HG3_PB_SVrefine2Falcon1Dovetail_8826:HG3_Ill_SVrefine2DISCOVARDovetail_10394:HG2_PB_SVrefine2PB10Xhap12_10521:HG2_PB_pbsv_14574;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10521:HG3_Ill_SVrefine2DISCOVARDovetail_10394:HG3_PB_SVrefine2Falcon1Dovetail_8826:HG3_PB_SVrefine2PBcRDovetail_6878;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.288462;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=102;DistBack=177;DistForward=68;DistMin=68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=566;REFWIDENED=13:114179850-114180415;PctSeqSimilarity=0.9823;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=376;EndDistance=376;GTMatch=0;TruScore=66;MatchId=1599.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:18:0|1:15:1:2:25:./.:6:0:1:1:./.:20:3:./.:.:.:.:.:.
chr14	26878386	HG2_Ill_SVrefine2DISCOVARplusDovetail_3681	C	CATATTATATATGATATATTATATGATATATATGATATCATATATATGATATATATCACATATATGATATCATATATATGATATATATCACATATATGATATCATATATATGATATATATCATATATATGATATCATATATGTG	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3681:HG2_PB_pbsv_14722:HG4_Ill_SVrefine2DISCOVARDovetail_10333;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3681:HG4_Ill_SVrefine2DISCOVARDovetail_10333;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.197279;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=143;DistBack=22907;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=288;REFWIDENED=14:26878387-26878674;PctSeqSimilarity=0.9362;PctSizeSimilarity=0.9301;PctRecOverlap=0;SizeDiff=10;StartDistance=-198;EndDistance=-198;GTMatch=0;TruScore=62;MatchId=1626.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:28:./.:30:21:8:4:./.:0:15:11:2:0/1:17:22:./.:.:.:.:.:.
chr14	90254548	HG4_Ill_SVrefine2DISCOVARDovetail_10611	G	GGCCGGGCGCGGTGGCGCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGAGGGCGGATCGCCTGAGCTCAGGAGTTCAGGACCAGCCTGGGCAACATGATGAAACCCCATCTCTGCTAAAAATACAGAATTA	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10410:HG2_Ill_GATKHC_23933:HG2_Ill_GATKHCSBGrefine_9988:HG2_Ill_250bpfermikitraw_20014:HG2_PB_HySA_27380:HG2_PB_PB10Xdip_10117:HG3_PB_pbsv_14671:HG4_PB_HySA_21903:HG2_PB_pbsv_15021:HG4_PB_SVrefine2PBcRDovetail_7468:HG4_PB_pbsv_14953:HG4_PB_SVrefine2Falcon1Dovetail_9153:HG4_Ill_SVrefine2DISCOVARDovetail_10611:HG3_Ill_SVrefine2DISCOVARDovetail_10764:HG2_PB_SVrefine2PBcRplusDovetail_3345:HG2_PB_SVrefine2PB10Xhap12_10861:HG2_PB_SVrefine2Falcon2Bionano_7459:HG2_PB_SVrefine2Falcon1plusDovetail_3594:HG2_Ill_SVrefine2DISCOVARplusDovetail_3998;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10410:HG4_PB_SVrefine2PBcRDovetail_7468:HG4_PB_SVrefine2Falcon1Dovetail_9153:HG4_Ill_SVrefine2DISCOVARDovetail_10611:HG3_Ill_SVrefine2DISCOVARDovetail_10764:HG2_PB_SVrefine2PBcRplusDovetail_3345:HG2_PB_SVrefine2PB10Xhap12_10861:HG2_PB_SVrefine2Falcon2Bionano_7459:HG2_PB_SVrefine2Falcon1plusDovetail_3594:HG2_Ill_SVrefine2DISCOVARplusDovetail_3998;NumExactMatchSVs=10;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.103704;ClusterMaxEditDist=0.375887;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=134;DistBack=11668;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=344;REFWIDENED=14:90254549-90254892;PctSeqSimilarity=0.9842;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-277;EndDistance=-277;GTMatch=0;TruScore=66;MatchId=1733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:79:1/1:0:11:0:5:./.:1:2:1:0:./.:5:3:./.:.:.:.:.:.
chr14	98254075	HG2_PB_SVrefine2Falcon1plusDovetail_3620	A	AATATATATATATATTTTATTTATATATATTTTATAAAATATATATATATATTTATTTATATATATTTTATAAAATATATATTTTATTTATATATATTTTATAAAATATATATTTTATTTATGTATATATTTTATAAAATATATATTTTATGTATATATTTTATAAAATATATATTTTATGTATATATTTTATAAAATATATATTTTATGTATATATTTTATAAAATATATATTTTATGTATATATTTTATAAAATATATATTTTATGTATATATTTTATAAAATATATATTTTATGTATATATTTTATAAAATATATATTTTATGTATATATTTTATAAAATATATATTTTATGTATATATTTTATAAAATATATATTTTATGTATATATTTTATAAAATATATATTTATGTATATATTTTATAAATATATATTTTATTTATGTATATTTTTTATAAATATATATATTTTATTTATGTATATTTTTATAAATATATATATTTTATTTATATATATTTTATAAATATATATATTTTATTTATATATATTTTATAAATATATATATTTTATTTATATATTTT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9138:HG2_PB_pbsv_15074:HG2_PB_SVrefine2Falcon2Bionano_7485:HG2_PB_SVrefine2PBcRplusDovetail_3374:HG2_PB_SVrefine2PB10Xhap12_10885:HG2_PB_SVrefine2Falcon1plusDovetail_3620:HG4_PB_SVrefine2PBcRDovetail_7495:HG4_PB_SVrefine2Falcon1Dovetail_9183:HG3_PB_SVrefine2PBcRDovetail_7060:HG2_PB_SVrefine2PB10Xhap12_10884;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3620;NumExactMatchSVs=1;ClusterMaxShiftDist=0.207015;ClusterMaxSizeDiff=0.207015;ClusterMaxEditDist=0.261762;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=580;DistBack=-33;DistForward=10;DistMin=-33;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=290;REFWIDENED=14:98254076-98254365;PctSeqSimilarity=0.9262;PctSizeSimilarity=0.7931;PctRecOverlap=0;SizeDiff=120;StartDistance=-658;EndDistance=-658;GTMatch=1;TruScore=57;MatchId=1749.0.3	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:25:0:28:./.:0:1:1:3:1/1:1:22:0/1:7:19:.:.:.
chr14	100632667	HG3_PB_SVrefine2PBcRDovetail_7068	T	TCGGGGTAACCTCTCTGGGGGAGTGGGGAAGCCATCCAGGAGAGCGGGGGGAGCCTGTCCGGGGAGTGGGGGGAGCCTGTCCGGGGGAGTGGGGGGAGCCTGCCCGGGGAAGTGGGAGGAGCCTGTCTGGGGGAGTC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7068:HG2_PB_assemblyticsfalcon_8412:HG2_PB_SVrefine2PB10Xhap12_10894:HG2_PB_SVrefine2Falcon2Bionano_7491:HG2_PB_SVrefine2Falcon1plusDovetail_3627;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_7068;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0218182;ClusterMaxSizeDiff=0.0216607;ClusterMaxEditDist=0.0581818;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=136;DistBack=-24;DistForward=-1;DistMin=-24;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=441;REFWIDENED=14:100632254-100632694;PctSeqSimilarity=0.947;PctSizeSimilarity=0.9855;PctRecOverlap=0;SizeDiff=-2;StartDistance=343;EndDistance=343;GTMatch=0;TruScore=64;MatchId=1753.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:7:16:./.:7:3:0:11:./.:2:6:2:8:./.:1:4:./.:.:.:.:.:.
chr14	101824228	HG4_Ill_SVrefine2DISCOVARDovetail_10662	T	TCAGCTGGGAGGTCTGGTATCTGCTCCACATGTTCTGTCATCCCTCAGTGAAGCTAGCCTGCATCCACAGAG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7503:HG2_PB_PB10Xdip_9373:HG2_PB_pbsv_15107:HG2_PB_HySA_27502:HG3_PB_HySA_22736:HG4_Ill_250bpfermikitraw_19822:HG4_PB_HySA_22002:HG4_PB_pbsv_15033:HG4_PB_SVrefine2Falcon1Dovetail_9199:HG4_Ill_SVrefine2DISCOVARDovetail_10662:HG3_PB_SVrefine2PBcRDovetail_7076:HG3_PB_SVrefine2Falcon1Dovetail_9155:HG3_Ill_SVrefine2DISCOVARDovetail_10823:HG2_PB_SVrefine2PBcRplusDovetail_3394:HG2_PB_SVrefine2PB10Xhap12_10907;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7503:HG4_PB_SVrefine2Falcon1Dovetail_9199:HG4_Ill_SVrefine2DISCOVARDovetail_10662:HG3_PB_SVrefine2PBcRDovetail_7076:HG3_PB_SVrefine2Falcon1Dovetail_9155:HG3_Ill_SVrefine2DISCOVARDovetail_10823:HG2_PB_SVrefine2PBcRplusDovetail_3394:HG2_PB_SVrefine2PB10Xhap12_10907;NumExactMatchSVs=8;ClusterMaxShiftDist=0.188406;ClusterMaxSizeDiff=0.173913;ClusterMaxEditDist=0.335766;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=71;DistBack=-71;DistForward=68;DistMin=-71;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=291;REFWIDENED=14:101824229-101824519;PctSeqSimilarity=0.984;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-210;EndDistance=-210;GTMatch=0;TruScore=66;MatchId=1760.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:43:0|1:21:1:3:36:./.:2:0:6:0:0/0:30:0:./.:.:.:.:.:.
chr14	104681190	HG2_PB_SVrefine2Falcon2Bionano_7522	A	AGGGAGGTGAGTGTGTAGGGAGGTGAGTGTGCAGGGAGGTGAGTGTGTAGGAAGGTCAGTGTGTAGGGAGGTGAGTGTGTAGGGAGGTCAGCATGTAGGGAGGTGAGTGTGTGGGGAGGTGTGTGTAGGGAGATGAGTGTGTAGGGAGGTGAGTGTGTAGGAAGGTCAGTGTGTAGGGAGGTGAGTGTGTAGGAAGGTCAGCATGTAGGGAGGTGATTGTGTAGGGAGGTGAGTGTGTGGGGAGGTGAGTGTGTAGGGAGGTGTGTAGGGAGGTGAGTGTGTAGGGAGGTGTGTGTGTAGGAGGTGTTTTGGGAGTTGTGTGTGTGGGGAGGTGAGTGTGTAGGGAGGTGAGTGTGTAGGGAGGTGAGTGTGTAGGGGAGGTTAGTGTATAGGGAGGTGAGTGTGTAGGGGAGGTGAGTGTGTAGGGGAGGTCAGTGTATAGAGAGGTCAGTGTGTAGGGAAGTGAGTGTGTAGGGGGGTGTGTGGGGAGATGAATGTGTAGGGAGGTGAGTGTGTAGGGGAGGTTAGTGTATAGGGAGGTCAGTGTGTAGGGAGGTGAGTGTGTAGGGAGGTCAGTGTGTAGGGAAGTGTGTAGGGGGTGAGTGTGTGGGGAGATGAATGTGTGGGAGGTGAGTGTGTAGGGAGGTGAGTGTGTAGGGAGGTCAGTGTGTAGGGAAGTGAGTGTGTAGGGGGTGAGTGTGAGGGGAGATGAATGTGTGGGGAGGTGAGTGTGTAGGGAGGTGAGTGTGTGGGGAGATGAATGTGTGGGGAGGTGTGTAGGGAGGTGAGTGTGTAGGGGGGTGAGTGTGTGGGGAGATGAATGTGTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7093:HG2_PB_SVrefine2Falcon1plusDovetail_3661:HG4_PB_pbsv_15061:HG2_PB_pbsv_15141:HG3_PB_pbsv_14781:HG4_PB_SVrefine2Falcon1Dovetail_9219:HG2_PB_HySA_27574:HG2_PB_SVrefine2PBcRplusDovetail_3414:HG2_PB_SVrefine2PB10Xhap12_10928:HG2_PB_SVrefine2Falcon2Bionano_7522:HG2_PB_SVrefine2Falcon1plusDovetail_3660;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7522:HG2_PB_SVrefine2PB10Xhap12_10928;NumExactMatchSVs=2;ClusterMaxShiftDist=0.147707;ClusterMaxSizeDiff=0.146516;ClusterMaxEditDist=0.294221;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=826;DistBack=1257;DistForward=356;DistMin=356;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=870;REFWIDENED=14:104681191-104682060;PctSeqSimilarity=0.9634;PctSizeSimilarity=0.9833;PctRecOverlap=0.2271;SizeDiff=-14;StartDistance=-643;EndDistance=-643;GTMatch=0;TruScore=72;MatchId=1769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:70:1/1:2:19:0:18:1/1:6:460:5:942:./.:1:3:1/1:3:58:.:2722:.
chr14	106317175	HG2_PB_PB10Xdip_9508	C	GAGAGACCCTCGTGACGGGCTTAGTGCCTGTATGAGAGAGACCCTCGTGACGGGCTTAGTGCCTGTATGAGAGAGACCCTCGTGACGGGCTTAGTGCCTGTATGAG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3694:HG2_PB_SVrefine2PBcRplusDovetail_3444:HG2_PB_SVrefine2PB10Xhap12_10967:HG2_PB_PB10Xdip_9508:HG2_PB_pbsv_15200:HG4_PB_pbsv_15117:HG2_PB_SVrefine2Falcon2Bionano_7551;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_9508:HG2_PB_SVrefine2PB10Xhap12_10967:HG2_PB_SVrefine2PBcRplusDovetail_3444;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0648148;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.166667;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=105;DistBack=0;DistForward=2682;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=353;REFWIDENED=14:106316867-106317219;PctSeqSimilarity=0.9988;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=300;EndDistance=300;GTMatch=0;TruScore=66;MatchId=1777.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:39:./.:0:1:0:4:./.:1:0:0:0:./.:3:0:./.:.:.:758179:.:.
chr15	52816162	HG2_PB_SVrefine2Falcon2Bionano_7622	G	GACAGTGCCATAGAATATAAAAGTGGATCTATCTCAGAAAAAATCTAGGCCATGTGGCTCCTGTATATATGAGAGGATATGTTGGGAATGGAAAGTTACACATATACAATCTACTGACCTTAAGAGCTGTTTCATCTAGGCAAGTTAACATGCTTTGCAAATGTGGAATTTTAGATTGTCTTTGCACTGTTACAATACTCAGCATCTCAGCACACATGGGAACCTCCTAATCAAACAGCTTCAGGTAAAAACAAAACAAAACACAAAAGTAAACAAAAAAATTAAAACTTTTTTAAAATTAAAAATAAGCCAGGCATGGTGGCTCATGTCTGTAATCTCAACACTTTGAGTGGCCGAGGCAGGAGAATCATTTGACCTGAGGAGTTAGAGATCAGCCTGGGCAACACAGCAAGATCCTGTCTCTGTAAAAAGTACAAAAATTAGCTGGGTTTGGTAGCACATGCCTGTAGATTCAGCTACCCAGGAAGGTGAGGTGGGAGGATGGCTTGCACCTGGGAGGTCGATACTGCAATGAGCCATGTTCACACCACTACACCTCAGCCTGGACAACAGAGTGAGACCCTGAACCTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAATAGGCTGGGTGTGGTGGCTCATGCCTGTAATCCCACACTATGGGAGGTGGAAGCAGGAGGATCACTTGAGTCCAGGAGTTTAAGACCAGCCTGGGCAACAAACTGAGACTATCTCTAGAAGAAATTTAAAAATTAGCTGGGTGCATAGCTGTGGTCCCAGCTACTCACGAGGCTGAGGTGGGAGGACAGCTTGAGCCCAGGAGTTAAAGGCTACAGTGAGCCATGTTCATTTCACTGCACTCCAGCCTGGGTGACACAGCA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9337:HG2_PB_pbsv_15412:HG3_PB_HySA_23172:HG2_PB_HySA_28020:HG2_PB_PB10Xdip_10703:HG2_10X_SVrefine210Xhap12_10645:HG3_PB_SVrefine2PBcRDovetail_7230:HG2_PB_SVrefine2Falcon2Bionano_7622:HG2_PB_SVrefine2PB10Xhap12_11124;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7622:HG3_PB_SVrefine2PBcRDovetail_7230;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0495595;ClusterMaxSizeDiff=0.0484582;ClusterMaxEditDist=0.167401;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=890;DistBack=26240;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=888;REFWIDENED=15:52816163-52817050;PctSeqSimilarity=0.9966;PctSizeSimilarity=0.9911;PctRecOverlap=0.3415;SizeDiff=-8;StartDistance=-588;EndDistance=-588;GTMatch=1;TruScore=77;MatchId=1822.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:63:./.:12:8:8:20:./.:4:0:0:41:0/1:6:21:0/1:27:19:.:.:.
chr15	93114612	HG4_Ill_250bpfermikitraw_20429	G	GTCTTCCTCCAAGACTGGAGTCTTCGTGGAGTTCTGAGGAATTCACTTTCCAAGCAAGAAGGTTTTGGGTCCTCATGTCA	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_20773:HG4_PB_HySA_22759:HG2_PB_PB10Xdip_11168:HG2_PB_PB10Xdip_11167:HG2_PB_HySA_28488:HG4_PB_pbsv_15542:HG4_Ill_250bpfermikitraw_20429:HG3_PB_pbsv_15291:HG3_PB_assemblyticsfalcon_9160:HG3_Ill_250bpfermikitraw_20174:HG2_PB_assemblyticsPBcR_8891;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20773:HG4_Ill_250bpfermikitraw_20429:HG3_PB_assemblyticsfalcon_9160:HG3_Ill_250bpfermikitraw_20174:HG2_PB_assemblyticsPBcR_8891;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0848485;ClusterMaxSizeDiff=0.0848485;ClusterMaxEditDist=0.251497;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=79;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=309;REFWIDENED=15:93114613-93114921;PctSeqSimilarity=0.9972;PctSizeSimilarity=0.9873;PctRecOverlap=0;SizeDiff=1;StartDistance=-101;EndDistance=-101;GTMatch=0;TruScore=66;MatchId=1915.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:64:1/1:0:8:2:12:./.:3:5:3:3:0/1:10:17:./.:.:.:.:.:.
chr15	94047229	HG2_PB_SVrefine2Falcon2Bionano_7747	T	TTCAAGGGTGACTTTTATTTTTTTTTTTTTTTGAGACGGTGTTTTTGCTCTTCTTGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTTACTGCAACCTCTGTCTCCTGGGTTCAAGCGATTCTTCTGCCTCATCCTCCCAAGTAGCTGGGATTACAGGTGCCCGCCATCACGCCTGGCTAATTTTTTTGTAGTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGATCTCAGGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7747:HG4_PB_SVrefine2Falcon1Dovetail_9535:HG2_PB_assemblyticsfalcon_9202:HG2_PB_SVrefine2Falcon1plusDovetail_3964:HG2_PB_PB10Xdip_11175:HG3_PB_HySA_23610:HG2_PB_HySA_28509:HG3_PB_pbsv_15308:HG3_PB_SVrefine2Falcon1Dovetail_9482:HG2_PB_SVrefine2PBcRplusDovetail_3713:HG2_PB_SVrefine2PB10Xhap12_11313;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7747:HG2_PB_SVrefine2PBcRplusDovetail_3713:HG2_PB_SVrefine2PB10Xhap12_11313;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0735786;ClusterMaxSizeDiff=0.0735786;ClusterMaxEditDist=0.332795;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=308;DistBack=58132;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=922;REFWIDENED=15:94047230-94048151;PctSeqSimilarity=0.9711;PctSizeSimilarity=0.9968;PctRecOverlap=0;SizeDiff=1;StartDistance=-886;EndDistance=-886;GTMatch=0;TruScore=65;MatchId=1917.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:47:0|1:23:3:3:36:./.:1:5:9:3:0/1:17:10:0/1:5:7:.:.:.
chr15	101851920	HG2_PB_pbsv_15719	T	TTTCACACCCACCCCATCGTCACCCTCACCAGCCCACTCCCATCGTCACCCTCACAAGCCCACCCCATCGTCACCCTCCACCAGGCCCACCCCATCGTCACCCCTCACAAGGCCCACCCCATCGCACCCCATCACAGCCCACCCCATCGTCACACCCTCACAAGCCCACCCATCGTCAACCCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7419:HG3_PB_pbsv_15387:HG2_PB_pbsv_15719:HG3_PB_SVrefine2Falcon1Dovetail_9533;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_15719;NumExactMatchSVs=1;ClusterMaxShiftDist=0.128342;ClusterMaxSizeDiff=0.128342;ClusterMaxEditDist=0.21466;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=182;DistBack=-484;DistForward=18;DistMin=-484;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=563;REFWIDENED=15:101851842-101852404;PctSeqSimilarity=0.9674;PctSizeSimilarity=0.956;PctRecOverlap=0;SizeDiff=8;StartDistance=-220;EndDistance=-220;GTMatch=0;TruScore=64;MatchId=1939.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:40:./.:9:0:0:2:./.:8:0:5:0:./.:1:0:./.:.:.:.:.:.
chr16	649556	HG4_PB_SVrefine2PBcRDovetail_7824	G	GTCAGCGTGGATTCAGCAAGGTTTTGTTCCCTCGTGGCATCAGTCAGCGTGGATTCAGCAAGGTTTTGTTACCTCGTGGCATCAA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7809:HG4_PB_HySA_22922:HG2_PB_pbsv_15774:HG4_PB_pbsv_15680:HG2_PB_PB10Xdip_12095:HG4_PB_assemblyticsfalcon_9185:HG4_PB_SVrefine2PBcRDovetail_7824:HG3_PB_SVrefine2PBcRDovetail_7438:HG2_PB_SVrefine2PBcRplusDovetail_3784:HG2_PB_SVrefine2PB10Xhap12_11393;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7809:HG4_PB_SVrefine2PBcRDovetail_7824:HG3_PB_SVrefine2PBcRDovetail_7438:HG2_PB_SVrefine2PBcRplusDovetail_3784:HG2_PB_SVrefine2PB10Xhap12_11393;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0946746;ClusterMaxSizeDiff=0.0591716;ClusterMaxEditDist=0.27907;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=84;DistBack=12186;DistForward=114;DistMin=114;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=535;REFWIDENED=16:649557-650091;PctSeqSimilarity=0.9849;PctSizeSimilarity=0.9643;PctRecOverlap=0;SizeDiff=3;StartDistance=-115;EndDistance=-115;GTMatch=0;TruScore=64;MatchId=1956.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:./.:0:4:0:7:./.:0:0:0:0:0/0:10:0:./.:.:.:.:.:.
chr16	656095	HG3_PB_SVrefine2PBcRDovetail_7439	T	TGCTGACACATAGTCCTCTCGGTCCTCAGTCCAGTGTGGGTTTCCCTGGGCTGAAGTCAAGGTGTTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7810:HG2_PB_PB10Xdip_12099:HG4_PB_assemblyticsfalcon_9186:HG2_PB_PB10Xdip_12098:HG4_PB_pbsv_15681:HG2_PB_pbsv_15775:HG4_PB_SVrefine2PBcRDovetail_7825:HG3_PB_pbsv_15435:HG3_PB_SVrefine2PBcRDovetail_7439:HG2_PB_SVrefine2PBcRplusDovetail_3785:HG2_PB_SVrefine2PB10Xhap12_11394;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7810:HG4_PB_SVrefine2PBcRDovetail_7825:HG3_PB_SVrefine2PBcRDovetail_7439:HG2_PB_SVrefine2PBcRplusDovetail_3785:HG2_PB_SVrefine2PB10Xhap12_11394;NumExactMatchSVs=5;ClusterMaxShiftDist=0.190476;ClusterMaxSizeDiff=0.190476;ClusterMaxEditDist=0.368;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=66;DistBack=-5740;DistForward=292;DistMin=-5740;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=464;REFWIDENED=16:656096-656559;PctSeqSimilarity=0.9963;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-339;EndDistance=-339;GTMatch=0;TruScore=66;MatchId=1957.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:65:1/1:1:8:0:6:./.:0:0:2:0:0/0:21:0:./.:.:.:.:.:.
chr16	952570	HG3_PB_SVrefine2Falcon1Dovetail_9596	T	TGTGGTGACCTCTGCACTGCCTGTGGGGACGCCCGTCTCTGCTGCGTGGTGGTGACCTCTGCATCGCCCACAGGACGCCTGTCTCTGCTGTGTGGGGTGACCTCTGCACTGCCTGTGGGGACGCCCGTCTCTGCTGCGTGGTGGTGACCTCTGCACTGCCCACAGGACGCCTGTCTCTGCTGCGTGGTGGTGACCTCTGCACTGCCCACAGGACTCCTGTCTCTGCTGTGTGGTGGTGACCTCTGCACTGCCTGTGGGGACGCCCGTCTCTGCTGCGTGGTGGTGACCTCTGCACTGCCCACAGGACGCCTGTCTCTGCTGCGTGGTGGTGACCTCTGCACTGCCCACAGGATGCCTGTCTCTGCTGTGTGGTGGTGACCTCTGCACTGCCCGTGGGGACGCCTGTCTCTGCTGCGTGGTGGTGACCTCTGCACTGCCTGTGGGGACGCCTGTCTCTGCTGTGTGGTGGTGACCTCTGCACTGCCTGTGGGGACGCCCGTCTCTGCTGCGTGGTGGTGACCTCTGCACTGCCCACAGGACTCCTGTCTCTGCTGTGTGGTGGTGACCTCTGCACTGCCTGTGGGGACGCCCGTCTCTGCTGCGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7828:HG2_PB_PB10Xdip_12174:HG4_PB_pbsv_15704:HG2_PB_PB10Xdip_12173:HG2_PB_pbsv_15799:HG4_PB_HySA_22948:HG4_PB_SVrefine2Falcon1Dovetail_9621:HG2_PB_SVrefine2Falcon1plusDovetail_4060:HG3_PB_SVrefine2PBcRDovetail_7455:HG3_PB_SVrefine2Falcon1Dovetail_9596:HG2_PB_SVrefine2PBcRplusDovetail_3805:HG2_PB_SVrefine2PB10Xhap12_11419;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7828:HG3_PB_SVrefine2PBcRDovetail_7455:HG3_PB_SVrefine2Falcon1Dovetail_9596:HG2_PB_SVrefine2PBcRplusDovetail_3805:HG2_PB_SVrefine2PB10Xhap12_11419;NumExactMatchSVs=5;ClusterMaxShiftDist=0.153339;ClusterMaxSizeDiff=0.150041;ClusterMaxEditDist=0.305976;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=604;DistBack=6373;DistForward=342;DistMin=342;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1551;REFWIDENED=16:952571-954121;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1964.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:49:1/1:4:14:2:11:./.:0:0:0:0:./.:0:0:./.:0:5:.:12567:.
chr16	1142241	HG2_PB_SVrefine2PB10Xhap12_11430	C	CCCAGTCCCTGCACACAGTCGGCACTCAATCAATCCCTGCACACAGCTGGCACTCAATCAGTCCCTGCACACAGTCGGCGCTCAATCAATCCCTGCACACAGTCGGCGCTCAATCAATCCCTGCACACAGTCGGGGCACAACCAATCCCTGCACACAGTCGGCGCTCAATCAATCACTGCACACAGTCGGCACTCAACCAATCACAGCACACAGTCGTCGCTCAACCAATCACAGCACACAGTCGGCACTCAACCAATCCCTGCACACAGTCGGCGCTCAACCAATCACAGCACACAGTCGGCGCTCAATCAATCCCTGCACACAGTCGGCGCTCAACCAATCCCTGCACACAGTCGGCGCTCAACAAATCACTGCACACAGTCGGCGCTCAACCAATCACAGCACACAGTCGGCGCTCAACCAATCACAGCACACAGTCGGCGCTCAACCAATCCCTGCACACAGTCGGCGCTCAACCAATCCGTGCACACAGTCGGCGCTCAACCAATCACAGCACACAGTCGTCGCTCAACCAATCACAGCACACAGTCGGCACTCAA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9631:HG3_PB_HySA_23833:HG2_PB_pbsv_15811:HG3_PB_pbsv_15461:HG4_PB_pbsv_15724:HG4_PB_SVrefine2PBcRDovetail_7841:HG4_PB_pbsv_15723:HG3_PB_pbsv_15460:HG2_PB_pbsv_15810:HG3_PB_SVrefine2Falcon1Dovetail_9602:HG2_PB_SVrefine2Falcon1plusDovetail_4068:HG2_PB_SVrefine2PBcRplusDovetail_3814:HG2_PB_SVrefine2PB10Xhap12_11430:HG2_PB_SVrefine2Falcon2Bionano_7836;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7836:HG2_PB_SVrefine2PB10Xhap12_11430:HG2_PB_SVrefine2PBcRplusDovetail_3814:HG3_PB_SVrefine2Falcon1Dovetail_9602:HG4_PB_SVrefine2PBcRDovetail_7841;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0662021;ClusterMaxSizeDiff=0.0662021;ClusterMaxEditDist=0.24683;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=560;DistBack=3443;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1117;REFWIDENED=16:1142242-1143358;PctSeqSimilarity=0.9738;PctSizeSimilarity=0.9929;PctRecOverlap=0;SizeDiff=4;StartDistance=-737;EndDistance=-737;GTMatch=0;TruScore=65;MatchId=1967.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:101:1/1:1:23:0:26:./.:0:1:0:3:./.:0:0:1/1:1:14:.:.:.
chr16	4254407	HG3_Ill_manta_3527	T	TACAGCCCCGGCCTCTAAGATACAGCCCCGGCCTCCAAGATACAGCCCCGGCCTCTA	20	PASS	ClusterIDs=HG3_PB_HySA_23916:HG4_Ill_svaba_19588:HG4_Ill_Krunchall_21611:HG4_Ill_250bpfermikitraw_20607:HG4_Ill_150bpfermikitraw_19849:HG3_Ill_svaba_19771:HG3_Ill_manta_3527:HG3_Ill_Spiral_16256:HG3_Ill_Krunchall_20881:HG3_Ill_GATKHCSBGrefine_10365:HG3_Ill_250bpfermikitraw_20343:HG3_Ill_150bpfermikitraw_19803:HG2_Ill_svaba_19617;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_svaba_19617:HG3_Ill_150bpfermikitraw_19803:HG3_Ill_250bpfermikitraw_20343:HG3_Ill_GATKHCSBGrefine_10365:HG3_Ill_Krunchall_20881:HG3_Ill_Spiral_16256:HG3_Ill_manta_3527:HG3_Ill_svaba_19771:HG4_Ill_150bpfermikitraw_19849:HG4_Ill_250bpfermikitraw_20607:HG4_Ill_Krunchall_21611:HG4_Ill_svaba_19588;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0917431;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.12844;PBcalls=1;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=8;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=56;DistBack=-1;DistForward=1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1;REFWIDENED=16:4254406-4254409;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1979.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:54:15:./.:24:2:6:5:1|0:0:12:12:0:0/1:41:16:./.:.:.:.:.:.
chr16	9942965	HG4_Ill_SVrefine2DISCOVARDovetail_11174	T	CACTGTTTTATATATTTAAATATATAAAATACACTGTTTTATATATTTAAATATATAAAATACACTGTTTTATATATTTAAATATATAAAATAC	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_12879:HG2_PB_SVrefine2Falcon1plusDovetail_4112:HG4_PB_SVrefine2PBcRDovetail_7878:HG4_Ill_SVrefine2DISCOVARDovetail_11174:HG2_PB_assemblyticsPBcR_9164:HG2_PB_SVrefine2PBcRplusDovetail_3856:HG2_PB_SVrefine2PB10Xhap12_11481:HG2_PB_pbsv_15895:HG2_PB_PB10Xdip_12880:HG3_PB_pbsv_15550;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11481:HG2_PB_SVrefine2PBcRplusDovetail_3856:HG2_PB_assemblyticsPBcR_9164:HG4_Ill_SVrefine2DISCOVARDovetail_11174:HG4_PB_SVrefine2PBcRDovetail_7878;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0537634;ClusterMaxSizeDiff=0.0430108;ClusterMaxEditDist=0.236559;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=93;DistBack=424;DistForward=86;DistMin=86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=774;REFWIDENED=16:9942378-9943151;PctSeqSimilarity=0.9989;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=359;EndDistance=359;GTMatch=0;TruScore=66;MatchId=1996.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:57:1/1:3:18:0:22:./.:0:0:0:0:./.:12:1:./.:.:.:.:.:.
chr16	26385342	HG4_PB_SVrefine2Falcon1Dovetail_9716	A	AATGGGTGAATGGATGAATGAATGAATAGTTGGATGGATGGGTGAATGGGTGGATGGAAGAATCAGTGGAGGGGTAGATGAATGGATGGATGGATGGATGGATGGATGGATGAGTGTGAGTGGATGGGTGGGTGGATGGGTGGATAGGCAGATGAGTGAGTAGGTGGGTGGATAGGTGGGTAGACAAATGGATGACCGATGAATAAATGGGTGGATAGACGAATGGGTAGATGGGTGAATGGGGGGGGTAGATGAGTGAATAGGTGGATGGGTGGATAGATAAGATGGATGGATGATTGGCTGGGTGGGTGGATGGATTTATGAGTGGGCAGGTGGATGGGTGGATGAACGAATGGGTGATGGATGGGTGGATGCTTAGATAGGTGAGTGAATGGATGAATGAATGAAAGGACTGGTGGGGGTGTATGCATGGATGGAAGGGTGAATGTATGGATGATGGGTGAGTGGATGGGTGGATGGATGGAATGGGTAAGTAAGCAGGCAGATGGATGGGTGGATGAATGGGAGAATGGGTGAATGGATAGATGGGTGGATGGGTTGATGGGTGAGCAAGTAGATGGGTGGATACATGGATAAAAGGGTGGATTGGTGAGTGGATGTATGTGCTGATGGGTGAATGTATGGATAAACGGGTATATGGGTGGATTAATGGGTGGATGGGTGAATGGATGGGTAGATGTGTGGATGGATAGATGCGTGAGTGGGTGGGTGGATTTATGGGTGAATGGTGGAGTGGATAATGGGTAGATGGGTAAGTGGTTGTATGAGTGGTAGATGGTTGGATGGATGGATGGATGGATGGATGGATGGAATGGATCGATACATGGGTGGGTGGATGGGTGAGTGAATACATTGGTGAAAGG	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9716:HG3_PB_pbsv_15653:HG2_PB_PB10Xdip_11698:HG4_PB_pbsv_15914:HG4_PB_HySA_23250:HG2_PB_pbsv_15998:HG2_PB_HySA_29134:HG2_PB_HySA_29133:HG2_Ill_tnscope_1727:HG2_PB_SVrefine2PB10Xhap12_11564:HG2_PB_SVrefine2PBcRplusDovetail_3917:HG3_PB_SVrefine2PBcRDovetail_7550:HG2_PB_SVrefine2Falcon2Bionano_7877:HG3_PB_SVrefine2Falcon1Dovetail_9712:HG2_PB_SVrefine2Falcon1plusDovetail_4178;NumClusterSVs=15;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_9716;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0615723;ClusterMaxSizeDiff=0.0604728;ClusterMaxEditDist=0.254839;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=883;DistBack=1609;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=900;REFWIDENED=16:26385343-26386242;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9955;PctRecOverlap=0.3123;SizeDiff=-4;StartDistance=-608;EndDistance=-608;GTMatch=1;TruScore=76;MatchId=2022.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:83:1/1:4:26:0:16:1/1:24:1430:13:955:1/1:1:27:0/1:16:56:.:.:.
chr16	51053722	HG3_PB_SVrefine2Falcon1Dovetail_9917	A	AACCAAAGCACTGCGTCTCCCTTCCGGAACTGCACTGCCTCTCACCCAAGCACTCCACTCCCTTCCAGAACTGCACTGCCTCCC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4338:HG4_Ill_250bpfermikitraw_20991:HG4_PB_pbsv_15983:HG4_PB_HySA_23420:HG3_PB_pbsv_15720:HG3_PB_HySA_24288:HG2_PB_HySA_29295:HG2_PB_PB10Xdip_12039:HG4_PB_SVrefine2PBcRDovetail_8019:HG4_PB_SVrefine2Falcon1Dovetail_9892:HG4_Ill_SVrefine2DISCOVARDovetail_11276:HG3_PB_SVrefine2PBcRDovetail_7751:HG3_PB_SVrefine2Falcon1Dovetail_9917:HG2_PB_SVrefine2PBcRplusDovetail_3978:HG2_PB_SVrefine2PB10Xhap12_11626:HG2_PB_SVrefine2Falcon2Bionano_7897;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4338:HG4_PB_SVrefine2PBcRDovetail_8019:HG4_PB_SVrefine2Falcon1Dovetail_9892:HG4_Ill_SVrefine2DISCOVARDovetail_11276:HG3_PB_SVrefine2PBcRDovetail_7751:HG3_PB_SVrefine2Falcon1Dovetail_9917:HG2_PB_SVrefine2PBcRplusDovetail_3978:HG2_PB_SVrefine2PB10Xhap12_11626:HG2_PB_SVrefine2Falcon2Bionano_7897;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0946746;ClusterMaxSizeDiff=0.0591716;ClusterMaxEditDist=0.327485;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=83;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=302;REFWIDENED=16:51053723-51054024;PctSeqSimilarity=0.9703;PctSizeSimilarity=0.988;PctRecOverlap=0;SizeDiff=1;StartDistance=-152;EndDistance=-152;GTMatch=0;TruScore=65;MatchId=2031.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:./.:0:2:0:1:./.:11:2:12:0:0/0:15:0:./.:.:.:.:.:.
chr16	81787839	HG4_PB_SVrefine2Falcon1Dovetail_9984	T	TCCACCCATCCCCACCTCTTCCTTCCCTCCCCCATCTCATTCCCTCCCCTCCCACCTCCTTCCCTCGCCTCCCCCACCTCCTTCCCCTGTCACCTCCTTCCCGCCCATCCCACCTCCTCCCCTCCCCTCCCCACCTCCTCCCCACCCTCCCCACCTCCTCCCCTCCCTCCCACCTCCTCCCCACCCCTCCCCACCTCCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4438:HG3_PB_SVrefine2Falcon1Dovetail_10005:HG4_PB_SVrefine2Falcon1Dovetail_9984:HG3_PB_SVrefine2PBcRDovetail_7826:HG3_PB_HySA_24569:HG2_PB_SVrefine2PBcRplusDovetail_4059:HG2_PB_SVrefine2Falcon2Bionano_7972:HG2_PB_SVrefine2PB10Xhap12_11733;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_9984;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0638821;ClusterMaxSizeDiff=0.034398;ClusterMaxEditDist=0.226044;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=199;DistBack=13509;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=272;REFWIDENED=16:81787840-81788111;PctSeqSimilarity=0.9493;PctSizeSimilarity=0.9614;PctRecOverlap=0;SizeDiff=-8;StartDistance=-220;EndDistance=-220;GTMatch=0;TruScore=63;MatchId=2077.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:1:23:0:12:./.:4:0:6:0:0/0:18:0:./.:.:.:.:.:.
chr16	83691420	HG3_PB_SVrefine2Falcon1Dovetail_10017	A	ACATGTCCTCACCAGCAAGGTCCCATGTCCTCACCAGCAGGTCCCATATCCTCACCAGCAAGGTCCCATATCATCACCACCAGGTCCCATATCCTCACCAGCAAGGTCCCATGTCCCCACCACCAGGTCCCATATCCTCACCAGCAAGGTCTCATGTCCTCACCACCAGGTCCCATATCCTCACCAGCAAGGTCCCATATCCTCACCACCAGGTCCCATGTCCTCACCAGCAAGGTCCCATATCCTCACCACCAGGTGCCATATCCTCACCAGCAAGGTCTCATGTCCTCACCACCAGGTCCCATGTCCTCACCAGCAAGGTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4444:HG4_PB_SVrefine2Falcon1Dovetail_9992:HG3_PB_SVrefine2PBcRDovetail_7833:HG3_PB_SVrefine2Falcon1Dovetail_10017:HG2_PB_SVrefine2PBcRplusDovetail_4066:HG2_PB_SVrefine2PB10Xhap12_11743:HG2_PB_SVrefine2Falcon2Bionano_7980;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4444:HG3_PB_SVrefine2PBcRDovetail_7833:HG3_PB_SVrefine2Falcon1Dovetail_10017:HG2_PB_SVrefine2PBcRplusDovetail_4066:HG2_PB_SVrefine2PB10Xhap12_11743:HG2_PB_SVrefine2Falcon2Bionano_7980;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00308166;ClusterMaxSizeDiff=0.00308166;ClusterMaxEditDist=0.00308166;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=323;DistBack=14507;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=552;REFWIDENED=16:83691421-83691972;PctSeqSimilarity=0.9658;PctSizeSimilarity=0.9969;PctRecOverlap=0;SizeDiff=1;StartDistance=-511;EndDistance=-511;GTMatch=0;TruScore=65;MatchId=2083.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:95:1/1:2:35:1:24:./.:1:4:2:5:./.:1:1:./.:0:5:.:.:.
chr16	85196714	HG2_PB_SVrefine2Falcon1plusDovetail_4452	T	TACGCTGATTAGTACTGAGCACCGACTGTATGCCGGGTGCCTTCGTGGCACTTCTCGGTTGC	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4452:HG4_Ill_250bpfermikitraw_21278:HG4_PB_pbsv_16148:HG4_PB_HySA_23711:HG2_PB_HySA_29665:HG4_Ill_150bpfermikitraw_20500:HG3_Ill_250bpfermikitraw_21011:HG2_Ill_250bpfermikitraw_21613:HG2_PB_PB10Xdip_12669:HG4_PB_SVrefine2PBcRDovetail_8108:HG4_PB_SVrefine2Falcon1Dovetail_10000:HG4_Ill_SVrefine2DISCOVARDovetail_11433:HG2_PB_SVrefine2PBcRplusDovetail_4076:HG2_PB_SVrefine2PB10Xhap12_11755:HG2_PB_SVrefine2Falcon2Bionano_7988;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4452:HG4_PB_SVrefine2PBcRDovetail_8108:HG4_PB_SVrefine2Falcon1Dovetail_10000:HG4_Ill_SVrefine2DISCOVARDovetail_11433:HG2_PB_SVrefine2PBcRplusDovetail_4076:HG2_PB_SVrefine2PB10Xhap12_11755:HG2_PB_SVrefine2Falcon2Bionano_7988;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0491803;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.325203;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=61;DistBack=6907;DistForward=92;DistMin=92;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=305;REFWIDENED=16:85196715-85197019;PctSeqSimilarity=0.9816;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-264;EndDistance=-264;GTMatch=0;TruScore=66;MatchId=2086.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:44:0|1:22:3:4:34:./.:7:1:11:1:0/0:33:1:./.:.:.:.:.:.
chr16	87251195	HG2_PB_SVrefine2Falcon2Bionano_8005	G	GAGCACAGATCTGATCCCAACACGGACCTGACCCCCAGCACGGACCTGACCCCCAGCACGGACCTGACCCCCAACACGGACCTGATACCCAACACGGACCTGACCCCCAACACGGACCTGACCCCCAGCACGGACCTGACCCCCAACACGGACCTGATCCCCAACACGGACCTGACCCCCAACACGGACCTGACCCCCAGCACGGACCTGACCCCCAGGTGTGGACCTAACCCCCAGCACGGACCTGACCCCAGGGCGCGGACCTGACCCCCAGCGCGGACCTGACCCCCAGCACGGACCTGACCCCCAGCACGGACCTGACCCCCAGGTGTGGACCTGACCCCCAGGTGTGGACCTGACCCCCAGGTGTGGACCTAACCCCCAGCATGGACCTGACCCCAGGGCGCGGACCTGACCCCCAGCGCGGACCTGACCCCCAGCGCGGACCTGACCCCCAGCACGGACCTCACCCCC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10019:HG3_PB_SVrefine2Falcon1Dovetail_10048:HG2_PB_SVrefine2PBcRplusDovetail_4094:HG2_PB_SVrefine2PB10Xhap12_11781:HG2_PB_SVrefine2Falcon2Bionano_8005:HG2_PB_SVrefine2Falcon1plusDovetail_4475;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8005:HG2_PB_SVrefine2PB10Xhap12_11781:HG2_PB_SVrefine2PBcRplusDovetail_4094;NumExactMatchSVs=3;ClusterMaxShiftDist=0.132733;ClusterMaxSizeDiff=0.132733;ClusterMaxEditDist=0.13544;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=473;DistBack=14528;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=912;REFWIDENED=16:87251196-87252107;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2098.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:110:1/1:2:33:0:24:./.:1:12:1:5:1/1:0:9:./.:1:19:.:.:.
chr16	89046073	HG3_PB_SVrefine2PBcRDovetail_7881	A	AATAGATGAATGAATAGATTGATGAATGAATGGGTGGGTGGGTGAGTGGATGGGTGGGTAGATGATGGGTGGATGGGTGGGTGGGTGGATGAGTGAATGGGTGGATGGATGGGTGGATAGATGGGTGAGTGGGTGGATAGATGGGTGAGTGAGTGAGTGGGTGGATGGGTGGGTGGATGGATAGATGGGTGAATGGGCGGAAAGATGGGTGAATGGGTGGATGGATGAATGGATAAATGGGTAAATGGGTGGGTGGATGGAGAGATGGGTGAATGGGTGGGTAGGTAGATGGATGGGTGTGTGGGTGAATGAATGGTGGATGGGTGTGTGGGTGGGTGGGTGGATAGACGGGTGAATGGGTGGATGAGTGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4509:HG3_PB_SVrefine2PBcRDovetail_7881:HG2_PB_SVrefine2PBcRplusDovetail_4125:HG2_PB_SVrefine2PB10Xhap12_11820;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4509:HG3_PB_SVrefine2PBcRDovetail_7881:HG2_PB_SVrefine2PBcRplusDovetail_4125:HG2_PB_SVrefine2PB10Xhap12_11820;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=370;DistBack=4406;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1356;REFWIDENED=16:89046074-89047429;PctSeqSimilarity=0.9223;PctSizeSimilarity=0.9788;PctRecOverlap=0;SizeDiff=-8;StartDistance=-391;EndDistance=-391;GTMatch=0;TruScore=63;MatchId=2110.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:./.:1:3:1:8:./.:0:0:0:0:1/1:0:18:1/1:1:8:.:.:.
chr16	89395087	HG2_PB_HySA_29895	C	CACACACCCAGGAGCACGGGCGAAATCAGCGGAGGCCCCTGCTGAGTGAGTGGACA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_12832:HG3_PB_HySA_24772:HG2_PB_HySA_29895:HG4_PB_HySA_23897;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_29895;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.149533;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=55;DistBack=66;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=569;REFWIDENED=16:89394929-89395497;PctSeqSimilarity=0.9885;PctSizeSimilarity=0.9455;PctRecOverlap=0;SizeDiff=3;StartDistance=76;EndDistance=76;GTMatch=0;TruScore=64;MatchId=2115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:50:1/1:1:28:4:21:0/0:12:0:9:0:0/0:12:0:./.:.:.:.:.:.
chr16	89478270	HG2_PB_SVrefine2Falcon2Bionano_8048	A	AAGATGCCTCCCAGAGTCTCCTGGCCATGTTCCATCCCTCCCCTCAGCCAGGTACTGGGGTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8048:HG2_PB_HySA_29901:HG3_PB_HySA_24777:HG2_PB_PB10Xdip_12835:HG4_PB_HySA_23902:HG2_PB_SVrefine2Falcon1plusDovetail_4525:HG4_PB_SVrefine2PBcRDovetail_8151:HG3_PB_SVrefine2PBcRDovetail_7888:HG3_PB_SVrefine2Falcon1Dovetail_10108:HG2_PB_SVrefine2PBcRplusDovetail_4140:HG2_PB_SVrefine2PB10Xhap12_11837:HG3_PB_pbsv_16002;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8048:HG4_PB_SVrefine2PBcRDovetail_8151:HG3_PB_SVrefine2PBcRDovetail_7888:HG3_PB_SVrefine2Falcon1Dovetail_10108:HG2_PB_SVrefine2PBcRplusDovetail_4140:HG2_PB_SVrefine2PB10Xhap12_11837;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0967742;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.306452;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=61;DistBack=11335;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=546;REFWIDENED=16:89478271-89478816;PctSeqSimilarity=0.9861;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-189;EndDistance=-189;GTMatch=0;TruScore=66;MatchId=2118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:1:22:1:14:./.:6:0:1:0:0/0:17:0:./.:.:.:.:.:.
chr16	89973749	HG2_PB_SVrefine2Falcon2Bionano_8060	T	TTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCAGCTCCCGGCTCCCACCTCCCAGTTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCACCTCCCTCCTCCCTCCTCCCAGCTCCCTCCTCCCAGCTCCCTCCTCCCAGCTCCCACCTCCCAGTTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCTCCTCCCAGCTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCTCCTCCCAGCTCCTGGCTCCCACCTCCCAGTTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCAGTTCCCACCTCCCAGTTCCCACCTCCCTCCTCCCTCCTCTCAGCTCCCGGCTCCCACCTCCCAGTTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCTCCTCTCAGCTCCCGGCTCCCACCTCCCAGTTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCTCCTCCCAGCTCCCGGCTCCCACCTCCCAGTTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCACCTCCCTCCTCCCTCCTCCCAGCTCCCTCCTCCCAGCTCCCTCCTCCCAGCTCCCACCTCCCAGTTCCCACCTCCCAGCTCCCACCTCCCTCCTCCCTCCTCCCAGCTCCCAGCTCCCACCTCCCAGTTTCCACCTCCCAGCTCCCACCTCCCTCCTCCCTCCTCCCAGCTCCCGGCTCCCACCTCCCAGTTTCCACCTCCCAGCTCCAACCTCCCTCCTCCCTCCTTCCAGTTCCCACCTCCCAGCTCCCACCTCCCACCTCCCAGCACCCACCTCTCTCCTCCCTCCTCCCAGCTCCTGGCTCCCACCTCCCAGTTTCCACCTCCCAGCTCCAACCTCCCTCCTCCCTCCTTCCAGTTCCCACCTCCCAGCTCCCACCTCCCAGCTCCCACCTCTCTCCTCCCTCCTCCCAGCTCCCGGCTCCCACCTCCCAGTTTCCACCTCCCAGCTCCAACCTCCCTCCTCCCTCCTTCCAATTCCCACCTCCCAGCTCCCAGTTCCCACCTCCCAGCTCCCGCCTCCCACCTCCCAGCTCCTGCCTCCCTCCTCCCAGTTCCCAGCTCCCACCTCCCTCCTCCCGCCGCCTAGCTCCCACCTCCCAGCTCCCGCCTCCCACCTCCCAGCTACCGCC	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10129:HG3_PB_SVrefine2Falcon1Dovetail_10130:HG4_PB_SVrefine2Falcon1Dovetail_10102:HG2_PB_SVrefine2PB10Xhap12_11855:HG2_PB_SVrefine2Falcon2Bionano_8060:HG2_PB_SVrefine2PBcRplusDovetail_4155:HG2_PB_SVrefine2Falcon1plusDovetail_4540:HG3_PB_SVrefine2PBcRDovetail_7899;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8060:HG2_PB_SVrefine2PB10Xhap12_11855;NumExactMatchSVs=2;ClusterMaxShiftDist=0.037234;ClusterMaxSizeDiff=0.037234;ClusterMaxEditDist=0.0566038;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1148;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1498;REFWIDENED=16:89973750-89975247;PctSeqSimilarity=0.7282;PctSizeSimilarity=0.4103;PctRecOverlap=0.2768;SizeDiff=677;StartDistance=-492;EndDistance=-492;GTMatch=0;TruScore=47;MatchId=2120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:77:./.:1:17:0:1:./.:14:70:11:90:1/1:0:12:0/1:18:67:.:1174:.
chr17	41323	HG2_PB_SVrefine2PB10Xhap12_11864	A	ACCCCTGGCCTGTGACAGTTACCTGTTCCCCGCCCCCACGACAGTCACCCGTTCCCCCGTCCCCACGACAGTCGCCCGTTCCCCCGCCCCCGCGACAGTCACCCGTTCCCCCGGCCCCTCGACAGTCACCCGTTCCCCCGCCCCCGCGACAGTCACCCGTTCCCCCGCCCCCGCGACAGTCGCCCGTTCCCCCGGCCCCGCGACAGTCGCCCGTTCCCCCGCCCCCGCGACAGTCGCCCGTTCCCCCGGCCCCGCGACAGTCTCCCGTTCCCCCGGCCCCGCGACAGTCACCCGTTCCCCCCGCCCCCGCGACAGTCTCCCGTTCCCCCGCCCCCGCGACAGTCGCCCGTTCCCCCGCCCCCGCGACAGTCGCCCGTTCCCCCGCCCCCGCGACAGTCGCCCGTTCCCCCGCCCCCGCGACAGTCGCCCGTTCCCCCGCCCCCGCGACAGTCGCCCGTTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11864:HG2_PB_SVrefine2Falcon1plusDovetail_4547:HG4_PB_SVrefine2Falcon1Dovetail_10111:HG3_PB_SVrefine2Falcon1Dovetail_10138:HG2_PB_SVrefine2Falcon1plusDovetail_4546:HG2_PB_SVrefine2Falcon2Bionano_8064:HG2_PB_SVrefine2PBcRplusDovetail_4162;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11864:HG2_PB_SVrefine2PBcRplusDovetail_4162;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0732759;ClusterMaxSizeDiff=0.0732759;ClusterMaxEditDist=0.0962567;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=459;DistBack=18309;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1199;REFWIDENED=17:41324-42522;PctSeqSimilarity=0.4638;PctSizeSimilarity=0.2898;PctRecOverlap=0.2898;SizeDiff=326;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=34;MatchId=2122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:47:1/1:2:8:3:19:./.:0:2:0:4:1/1:0:14:1/1:2:22:.:.:.
chr17	548994	HG2_PB_SVrefine2Falcon2Bionano_8094	C	CGACTGGAGATAGGCTCCCACACACATCTCCGTGACCGTGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGACTGGCTCTTACACACATCTCCGTGACCGCGTGGTCTCTGCCTGATAAGGGTCTTATCTTTTCTAATTCATACCACGGACTGGAGACTGGCTCCCACACACATCTCCGTGACCGTGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGACTGGCTCCCACACACATCTCGGTGACCGCGTGGCCTCTGCCTGATAAGGGTCTTATCTTTTCTAATTCATACCACGGACTGGAGACTGGCTCTTACACACATCTCGGTGACCGCGTGGCCTCTGCCTGATAAGGGTCTTATCTTTTCTAATTCATACCACGGACTGGAGACTGGCTCCCACACACATCTCCATGACCGTGTGGCCTCTGCCTGATAAGGGTCTTATCTTTTCTAATCCATACCACGGACTGGAGATCGGCTCCCACACACATCTCCATGACCGCGTGGCCTCTGCCTGATAAGGGTCTTATTTTTTCTAATCCATACTACGGACTGGAGATCGGCTCCCACACACATCTCCGTGACCGTGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATACCACTGACTGGAGATTGGCTCCCACACACATCTCCGTGACCACGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCACACCACTGACTGGAGATTGGCTCCCACACACATCTCCGTGACCGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATTCATACCACGGACTGGAGACTGGCTCCCACACACATCTCCGTGACCGTGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCGTATCACGGACTGGAGACTGGCTCCCACACACATCTCCGTGACCACGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGACTGGCTCCCACACACATCTCCGTGACCGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCGTATCACGGACTGGAGACTGGCTCCCACACACATCTCCGTGACCGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCGTATCACGGACTGGAGACTGGCTCCCACACACATCTCCGTGACCGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCACACCACT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10153:HG2_PB_pbsv_16444:HG4_PB_pbsv_16376:HG3_PB_pbsv_16092:HG2_PB_HySA_29987:HG2_PB_SVrefine2Falcon1plusDovetail_4581:HG3_PB_SVrefine2Falcon1Dovetail_10172:HG3_PB_SVrefine2PBcRDovetail_7930:HG2_PB_SVrefine2PBcRplusDovetail_4199:HG2_PB_SVrefine2PB10Xhap12_11907:HG2_PB_SVrefine2Falcon2Bionano_8094;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8094:HG2_PB_SVrefine2PB10Xhap12_11907:HG2_PB_SVrefine2PBcRplusDovetail_4199:HG3_PB_SVrefine2PBcRDovetail_7930;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0697763;ClusterMaxSizeDiff=0.0675009;ClusterMaxEditDist=0.221296;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1275;DistBack=2206;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=1170;REFWIDENED=17:548995-550164;PctSeqSimilarity=0.9845;PctSizeSimilarity=1;PctRecOverlap=0.4588;SizeDiff=0;StartDistance=-690;EndDistance=-690;GTMatch=0;TruScore=81;MatchId=2128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:115:./.:1:3:0:1:./.:0:0:0:0:./.:0:0:0/1:13:41:.:1550:.
chr17	550028	HG3_PB_HySA_24845	C	CTCCCCCACACACATCTCCGTGACCGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCATATCACGGACTGGAGACTGGCTCCCCACACACATCTCCGTGACCGCGTGGCCACTGCCTCCTAAGGGTCTTATCTTTTCTAATCCACACCACTGACTGGAGATCGGCT	10	PASS	ClusterIDs=HG3_PB_HySA_24844:HG4_PB_HySA_23976:HG3_PB_HySA_24845:HG2_PB_HySA_29989;NumClusterSVs=4;ExactMatchIDs=HG3_PB_HySA_24845;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0467836;ClusterMaxSizeDiff=0.0467836;ClusterMaxEditDist=0.134897;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=174;DistBack=13;DistForward=131;DistMin=13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1170;REFWIDENED=17:548995-550164;PctSeqSimilarity=0.4853;PctSizeSimilarity=0.1365;PctRecOverlap=0.1373;SizeDiff=-1101;StartDistance=344;EndDistance=344;GTMatch=0;TruScore=25;MatchId=2128.1.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:12:105:./.:1:3:0:0:./.:1:1:1:0:0/0:16:0:./.:.:.:.:1550:.
chr17	1020314	HG3_PB_SVrefine2Falcon1Dovetail_10207	A	AGAGGCTGCAGTTCTTCCCAGCGTTATCCCTGAGCCTGAGTTCCTCCAGCAGCTTTATCCCTGAGCCTGAGTCCTCCCAGCTTTATCCCTGAGCCTGAGTTCTTCCCAGCGTTATCCCTGAGCCTGAGTTCTCCAGCGTTATCCCTGAGCCTGAGTCCTTCCCAGCGTTATCCTGAGCCTGAGTTCCTCCCAGGTTATCCCTGAGCCTGAGTTCCTCCAGCGTTATCCCTGAGCCTGAGTTCCTCCAGCGTTATCCCTGAGCCTGAGTTCCTCCCCAGCGTTATCCCTGAGCCTGAGTCCTCCCAGCGTTATCCCTGAGCCTGAGTTCCTCCAGCGTTATCCCTGAGCCTGAGTCCTTCCAGCGTTATCCCTGAGCCTGAGTTCCTCCAGCTTATCCCTGAGCCTGAGTTCCTCCAGCGTTATCCCTGAGCCTGAGTCCTCCCAGCTTATCCCTGAGCCTGAGTTCTCCAGCGTTATCCCTGAGCCTGAGTTCCTCCCAGCTTATCCCTGAGCCTGAGTTCCTCCCAGCGTTATCCCT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10207:HG2_PB_SVrefine2PB10Xhap12_11931:HG2_PB_SVrefine2PBcRplusDovetail_4218:HG2_PB_SVrefine2Falcon2Bionano_8116:HG4_PB_SVrefine2Falcon1Dovetail_10184;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10207;NumExactMatchSVs=1;ClusterMaxShiftDist=0.218332;ClusterMaxSizeDiff=0.218107;ClusterMaxEditDist=0.236869;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=537;DistBack=4065;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2435;REFWIDENED=17:1020315-1022749;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2133.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:8:38:1/1:3:16:4:15:./.:0:0:0:0:./.:0:0:0/1:2:8:.:.:.
chr17	2451426	HG2_PB_SVrefine2PBcRplusDovetail_4241	G	GTTTATTTATTTATTTTTGAGACAGAGTCTTGCTCCGTTGCTCAGGCTGGAGTGCAGTGGCGCAGTCTCAGCTCACTGCAACCTCCACGTCCCAGGTTCAAGCGATTCTTGTGTCTCACCCTCTTGAGTAGCTGAGATTACAGGCATGTGCCACCACGCCCAGCTAATTT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10240:HG2_PB_PB10Xdip_12995:HG2_PB_PB10Xdip_12994:HG2_PB_HySA_30061:HG2_Ill_MetaSV_1890:HG3_PB_HySA_24914:HG2_PB_pbsv_16523:HG4_PB_assemblyticsfalcon_10164:HG3_PB_pbsv_16172:HG4_PB_HySA_24041:HG4_PB_pbsv_16446:HG4_PB_SVrefine2Falcon1Dovetail_10218:HG4_PB_SVrefine2PBcRDovetail_8236:HG2_PB_SVrefine2Falcon2Bionano_8138:HG2_PB_SVrefine2Falcon1plusDovetail_4636:HG3_PB_SVrefine2PBcRDovetail_7971:HG3_Ill_SVrefine2DISCOVARDovetail_11754:HG2_PB_SVrefine2PBcRplusDovetail_4241:HG2_PB_SVrefine2PB10Xhap12_11964:HG2_Ill_SVrefine2DISCOVARplusDovetail_4981;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4981:HG2_PB_SVrefine2PB10Xhap12_11964:HG2_PB_SVrefine2PBcRplusDovetail_4241:HG3_Ill_SVrefine2DISCOVARDovetail_11754:HG3_PB_SVrefine2PBcRDovetail_7971;NumExactMatchSVs=5;ClusterMaxShiftDist=0.074928;ClusterMaxSizeDiff=0.0634006;ClusterMaxEditDist=0.268156;PBcalls=17;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=169;DistBack=16171;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=346;REFWIDENED=17:2451427-2451772;PctSeqSimilarity=0.9845;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-218;EndDistance=-218;GTMatch=0;TruScore=66;MatchId=2141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:2:23:0:26:./.:1:2:0:1:./.:6:0:./.:.:.:.:.:.
chr17	2851732	HG2_PB_SVrefine2Falcon1plusDovetail_4639	G	GGGGTGCGGCAAGAGGGAAGGAACAGGTGGATGCCTGTCTGCAGGAGAAGCTGTGCCTGTGTGTAGAGCTGCTGTGGACCAGGGGGAGGCAGGGAGGGCACAGGGTGGTGATGAGATGGAGAGAAGGGGTCCTGGACTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4244:HG4_PB_HySA_24050:HG2_PB_pbsv_16526:HG2_PB_HySA_30069:HG4_PB_pbsv_16449:HG2_PB_PB10Xdip_13100:HG2_PB_SVrefine2PB10Xhap12_11967:HG2_PB_SVrefine2Falcon1plusDovetail_4639;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4639:HG2_PB_SVrefine2PB10Xhap12_11967;NumExactMatchSVs=2;ClusterMaxShiftDist=0.14841;ClusterMaxSizeDiff=0.14841;ClusterMaxEditDist=0.309278;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=138;DistBack=26722;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=411;REFWIDENED=17:2851733-2852143;PctSeqSimilarity=0.9806;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-196;EndDistance=-196;GTMatch=0;TruScore=66;MatchId=2143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:./.:21:10:3:8:./.:2:0:2:0:0/0:11:0:./.:.:.:.:.:.
chr17	3862135	HG4_Ill_150bpfermikitraw_20697	C	CACATATATATACACATATATATATACACATATATATATACACACACACATATATAAAT	10	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_6531:HG4_Ill_scalpel_15059:HG4_Ill_manta_3785:HG4_Ill_150bpfermikitraw_20697:HG2_Ill_scalpel_15418:HG2_Ill_250bpfermikitraw_21835:HG2_Ill_150bpfermikitraw_20571:HG3_Ill_manta_3639:HG3_Ill_scalpel_15711;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20571:HG2_Ill_250bpfermikitraw_21835:HG2_Ill_scalpel_15418:HG4_Ill_150bpfermikitraw_20697:HG4_Ill_manta_3785:HG4_Ill_scalpel_15059;NumExactMatchSVs=6;ClusterMaxShiftDist=0.185185;ClusterMaxSizeDiff=0.185185;ClusterMaxEditDist=0.185185;PBcalls=0;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=58;DistBack=17;DistForward=23;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=191;REFWIDENED=17:3862000-3862190;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2149.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:0|1:31:4:5:25:./.:1:17:18:0:0/1:32:16:./.:.:.:.:.:.
chr17	39210999	HG4_PB_SVrefine2PBcRDovetail_8363	T	TGCTCAGCAGGAGGAGGTCCTGCAGGTGGTGCTGCAAGGGGTCGGCTGGCCGCAGGGGGACTGCACAGACACAGGCTGGCAGCAGGTGGTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10336:HG2_PB_assemblyticsfalcon_10687:HG3_PB_pbsv_16401:HG4_PB_pbsv_16670:HG2_PB_SVrefine2Falcon1plusDovetail_4782:HG2_PB_pbsv_16747:HG4_PB_SVrefine2PBcRDovetail_8363:HG4_PB_SVrefine2Falcon1Dovetail_10363;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10336:HG4_PB_SVrefine2PBcRDovetail_8363:HG4_PB_SVrefine2Falcon1Dovetail_10363;NumExactMatchSVs=3;ClusterMaxShiftDist=0.2;ClusterMaxSizeDiff=0.18;ClusterMaxEditDist=0.26;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=90;DistBack=3496;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=193;REFWIDENED=17:39211000-39211192;PctSeqSimilarity=0.9686;PctSizeSimilarity=0.8571;PctRecOverlap=0;SizeDiff=-15;StartDistance=-140;EndDistance=-140;GTMatch=0;TruScore=60;MatchId=2223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:24:1|0:2:18:26:3:./.:3:0:5:0:0/1:9:3:./.:.:.:.:.:.
chr17	55210028	HG2_PB_assemblyticsfalcon_10833	G	GGGGTGAGGGTGGCGGGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGCTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGGGGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGCGGGTGAGGATGGGCTGGCTGGAGGGGTGAGGGTGGGCGGGCTGGAGGGGTGAGGGGGGTGTGCTGGAGCGGGTGAGGATGGGCTGGCTGGAGGGGGTGAGGGTGGCGGCTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGTGGTGTGGGAGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGCGGGCTGGAGGGGTGAGGGTGGGTGTGCTGGAGCGGGTGAGGATGGGCTGGCTGGAGGGGTGAGGGTGGGCGGGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGCGGGTGAGGATGGGCTGGCTGGAGGGGTGAGGGTGGCGGGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGATGAGGGTGGGCGGGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGATGAGGGTGGGCGGGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGATGAGGGTGGGTGTGTTGGAGGGGATGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGATGAGGGTGGGTGTGTTGGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGATGAGGGTGGGTGTGTTGGAGGGGTGAGGGTGGGTGTGTTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGATGAGGGTGGGTGTGTTGGAGGGGATGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGGTGTGCTGGAGGGGATGAGGGTGGGTGTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGAGGGTGGGCTGGA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8282:HG2_PB_assemblyticsfalcon_10833:HG2_PB_SVrefine2Falcon1plusDovetail_4853;NumClusterSVs=3;ExactMatchIDs=HG2_PB_assemblyticsfalcon_10833;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0597598;ClusterMaxSizeDiff=0.0536013;ClusterMaxEditDist=0.194918;PBcalls=3;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1837;DistBack=34;DistForward=18381;DistMin=34;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=632;REFWIDENED=17:55209417-55210048;PctSeqSimilarity=0.5332;PctSizeSimilarity=0.3527;PctRecOverlap=0.3533;SizeDiff=1189;StartDistance=30;EndDistance=30;GTMatch=0;TruScore=41;MatchId=2260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:./.:0:0:0:0:./.:0:0:0:1:./.:3:3:0/1:6:10:.:1804:.
chr17	73190392	HG2_PB_SVrefine2PB10Xhap12_12306	G	GGCTGGAGTGCAGTGGCGTGATCTCTGCTCACTGCAACCTTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCTTCCTGAGTTGCTGGGATTACAGGCGAGCGCCACCATGTCTGGCTAAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTGGTCAGGCTGGAAATCCTGACCTTGTGCTTTGCCTGCCTCGGCTTCCCAAAGTGCTAGGATTACAGGCATGAGACACCGGGCCAGGCCAATTTTATTGTTGTTTTTTTTTTTTTTGAGATGGAGTCTCGGGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACAAAAATACAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCGCGCGTACGCACTCCAGCCTGGGCGACAGAGCGAGACTGCGTCTCAAAAAAAAAAAAAAAAAAAGAGGTGGAGTCTCGCTCTGTCGCCCCGGCTGGAGT	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10462:HG2_PB_HySA_30843:HG2_PB_HySA_30842:HG2_PB_pbsv_16934:HG4_PB_pbsv_16838:HG2_PB_SVrefine2PB10Xhap12_12307:HG4_PB_SVrefine2PBcRDovetail_8465:HG4_PB_HySA_24656:HG3_PB_HySA_25509:HG2_PB_HySA_30841:HG2_PB_PB10Xdip_13648:HG3_PB_pbsv_16597:HG2_PB_SVrefine2Falcon1plusDovetail_4909:HG2_PB_SVrefine2Falcon2Bionano_8332:HG2_PB_SVrefine2PBcRplusDovetail_4503:HG2_PB_SVrefine2PB10Xhap12_12306:HG2_10X_SVrefine210Xhap12_11750:HG4_PB_SVrefine2Falcon1Dovetail_10478;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11750:HG2_PB_SVrefine2PB10Xhap12_12306:HG2_PB_SVrefine2PBcRplusDovetail_4503;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0798771;ClusterMaxSizeDiff=0.0768049;ClusterMaxEditDist=0.208955;PBcalls=17;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=629;DistBack=101446;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=610;REFWIDENED=17:73190393-73191002;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2287.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:40:./.:2:11:3:9:./.:0:8:1:7:./.:0:8:1/1:3:76:.:.:.
chr17	75480337	HG3_PB_SVrefine2PBcRDovetail_8207	A	ATGATGGTGATGGTGGTGGTGATAGTGGTGGGATGGTAGTGGTGATGTGGGTGATGGTGATTGTGATGGTGGTGGTGGTGGTGATGGAGGTGATGGTGATAGTGATCATGAGGGTGATGGGGATGGTGGTGGTGGTGATGGTGACAGTGGTGGGATGGTAGTGATGATGTGGGTGATGGTGATGGTGGTGATGGTGGTGGTGGTGATTGTGGTGGTGGTGGTGATGATGGTGGTGATGATGGTGATTGTGGTGATGGTGATGGTGGTAATTGTGATGGTGGTGGTGGTGATGGTGGTGATGATGGTGATTGTGGTGATGGTGGTTATGATGGTGGTAATTGTGATGGTGGTGGTGATGGTGGTGATGGGGATGATGATGGTGATTGTGATGGGGGTGGTGGTGGTGATTGTGATGGTGGTGATGTGGGTGGTGGTGTGTGATGGTGGTGATGGGGTGGTGGTGGTGATTGTGATGGTGGTGGTGGTGTGGTGATTGTGATGGTGGTGATGTGGGTGGTGGTGGTTGATGGTGTGATGGGTGGTGGTGGTGATGGTGGTGGTGTGATGGTGGGTGATGTGGGTGGGTGGGGTGATTGTGATGGTTGTGATTGTGATGGTGGTGGTGGTGATGGTGATGATGGTGGTGATTGTGATGGTGGTGATGGGAGTGATGCTGGTGATTGTGGTGGTGAAGGGGTGATGGTGGTGATTGTGATGGTGGTGAAGGGGGTGATGGTGGTGATTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4517:HG3_PB_SVrefine2PBcRDovetail_8207:HG2_PB_SVrefine2PB10Xhap12_12324:HG3_PB_SVrefine2Falcon1Dovetail_10481:HG2_PB_SVrefine2Falcon1plusDovetail_4923;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_8207;NumExactMatchSVs=1;ClusterMaxShiftDist=0.123056;ClusterMaxSizeDiff=0.123056;ClusterMaxEditDist=0.133874;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=744;DistBack=-1115;DistForward=-1;DistMin=-1115;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1176;REFWIDENED=17:75480338-75481513;PctSeqSimilarity=0.9126;PctSizeSimilarity=0.797;PctRecOverlap=0;SizeDiff=151;StartDistance=-760;EndDistance=-760;GTMatch=1;TruScore=56;MatchId=2297.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:80:1/1:1:13:4:16:./.:10:139:8:148:./.:0:0:1/1:3:48:.:.:.
chr17	75777245	HG2_PB_SVrefine2Falcon2Bionano_8350	C	CCCCTCCAACTCCAGCAGTGCCCCCCCGACTCCAGCAGCCCCCACCACTCCAGCAGGCCCTCCCCACTCCAGCAGGCCCCCCCACTCCAGCAGGCCCCCCCACTCCAGCAGGCCCTCCCAACTCCAGCAGTGCCCCCCCCCACTCCAGCAGCCCCCACCACTCCAGCAGGCCCCCCCTACTCCAGTAGGTGCCCCTCACTACAACAGGCCCCCCCCACTCCAGCAGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4927:HG2_PB_SVrefine2Falcon2Bionano_8350:HG2_PB_SVrefine2PBcRplusDovetail_4519:HG2_PB_pbsv_16963;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8350;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0873563;ClusterMaxSizeDiff=0.0873563;ClusterMaxEditDist=0.202299;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=226;DistBack=4302;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=0/0;HG004_GT=0/0;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=530;REFWIDENED=17:75777246-75777775;PctSeqSimilarity=0.948;PctSizeSimilarity=0.9071;PctRecOverlap=0;SizeDiff=21;StartDistance=-380;EndDistance=-380;GTMatch=0;TruScore=61;MatchId=2299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:40:./.:15:12:6:13:./.:3:1:2:11:./.:3:1:./.:.:.:.:.:.
chr17	78814457	HG2_PB_pbsv_17031	A	AGCACGGCAGCTCCACACCGCACGGCAGCTCACATTCACCGCACGGGCAGGCTCATCTCTC	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_13731:HG2_PB_pbsv_17031:HG4_PB_pbsv_16933:HG4_PB_HySA_24764:HG2_PB_HySA_30990;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_17031;NumExactMatchSVs=1;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.10084;ClusterMaxEditDist=0.134454;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=60;DistBack=-22;DistForward=225;DistMin=-22;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=0;REFWIDENED=17:78814456-78814458;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2320.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:./.:7:15:6:6:./.:2:3:0:0:./.:0:0:./.:.:.:.:.:.
chr17	81005278	HG2_PB_SVrefine2Falcon2Bionano_8426	G	GTAATAAATCCCTACCAAAGAATAAGAAACTTAGGTCTATAATCAATCCTTATCAAAGAACAAGAAATTTAGGTCTATAATAAATCCCTACCAAAGAATAAGAAACTTAGGTCTATAATAAATCCCTACCAAAGAATAAGAAACTTAGGTCTATAATAAATCCCTACCAAAGAATAAGAAACTTAGGTCTA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8426:HG4_PB_SVrefine2Falcon1Dovetail_10587:HG3_PB_SVrefine2Falcon1Dovetail_10570:HG4_Ill_SVrefine2DISCOVARDovetail_11929:HG2_PB_pbsv_17121;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8426:HG4_Ill_SVrefine2DISCOVARDovetail_11929;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0719794;ClusterMaxSizeDiff=0.066838;ClusterMaxEditDist=0.262211;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=190;DistBack=-1;DistForward=66;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=531;REFWIDENED=17:81005279-81005809;PctSeqSimilarity=0.9687;PctSizeSimilarity=0.9895;PctRecOverlap=0;SizeDiff=2;StartDistance=-257;EndDistance=-257;GTMatch=0;TruScore=65;MatchId=2341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:44:0|1:22:3:1:30:./.:1:5:4:0:0/1:16:4:./.:.:.:.:.:.
chr18	218954	HG3_PB_SVrefine2PBcRDovetail_8297	A	AGTGGGCATGTGTTCCCTGAGCGGTACAAAAATAACCAGTGAGGATGGCATATATTCTTAATAATAAATACTCATGAAGTGGTGGCAGGACAAGATTGTGGGCATGTGTTCCCTGAGCAGTACAAAAATAACCAGTGAGGATGGCATATACTCTTAATAATAAATACTCATAAAGTGGTGGCAGGACAAGATT	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12434:HG2_PB_pbsv_17139:HG4_PB_SVrefine2Falcon1Dovetail_10596:HG4_PB_assemblyticsfalcon_10980:HG2_PB_PB10Xdip_14013:HG2_PB_PB10Xdip_14012:HG2_PB_HySA_31149:HG4_PB_pbsv_17039:HG3_PB_pbsv_16816:HG4_PB_SVrefine2PBcRDovetail_8552:HG3_PB_SVrefine2PBcRDovetail_8297:HG3_PB_SVrefine2Falcon1Dovetail_10584:HG2_PB_SVrefine2Falcon2Bionano_8440:HG2_PB_SVrefine2Falcon1plusDovetail_5022:HG2_PB_SVrefine2PBcRplusDovetail_4611;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5022:HG2_PB_SVrefine2Falcon2Bionano_8440:HG3_PB_SVrefine2Falcon1Dovetail_10584:HG3_PB_SVrefine2PBcRDovetail_8297:HG4_PB_SVrefine2PBcRDovetail_8552;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0612245;ClusterMaxSizeDiff=0.056266;ClusterMaxEditDist=0.202532;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=192;DistBack=37849;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=572;REFWIDENED=18:218955-219526;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9948;PctRecOverlap=0;SizeDiff=1;StartDistance=-218;EndDistance=-218;GTMatch=0;TruScore=66;MatchId=2344.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:79:1/1:4:29:2:27:./.:0:0:2:1:./.:3:0:./.:.:.:.:.:.
chr18	10414489	HG3_Ill_150bpfermikitraw_21395	G	GGCGGCTTCTGCTGGTACTCGCCCACCACGCCCACCAGAGCCACCGCACTTCCGGTTGCTGTCCAC	20	PASS	ClusterIDs=HG4_PB_HySA_24983:HG2_PB_pbsv_17215:HG3_PB_HySA_25849:HG2_PB_HySA_31276:HG4_Ill_GATKHCSBGrefine_11636:HG2_PB_PB10Xdip_13955:HG4_PB_assemblyticsfalcon_11091:HG2_PB_assemblyticsfalcon_11291:HG2_PB_assemblyticsPBcR_10907:HG3_PB_pbsv_16885:HG4_Ill_150bpfermikitraw_21444:HG3_Ill_250bpfermikitraw_22001:HG3_Ill_150bpfermikitraw_21395:HG2_Ill_150bpfermikitraw_21366;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21366:HG3_Ill_150bpfermikitraw_21395:HG3_Ill_250bpfermikitraw_22001:HG4_Ill_150bpfermikitraw_21444;NumExactMatchSVs=4;ClusterMaxShiftDist=0.138462;ClusterMaxSizeDiff=0.123077;ClusterMaxEditDist=0.25;PBcalls=9;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=65;DistBack=1057;DistForward=58;DistMin=58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=198;REFWIDENED=18:10414393-10414590;PctSeqSimilarity=0.9923;PctSizeSimilarity=0.9846;PctRecOverlap=0;SizeDiff=1;StartDistance=-65;EndDistance=-65;GTMatch=0;TruScore=65;MatchId=2364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:67:./.:0:13:0:3:./.:3:1:4:0:./.:4:2:./.:.:.:.:.:.
chr18	13672959	HG2_PB_SVrefine2Falcon1plusDovetail_5083	G	GTTTCCAGCTTCCTGATTATTAACATTCCTGAGACCCGACTTCTTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTATTTCCAGTTACATTCCTGAGCCCCGACTTCTTTATTTCCAATTTTCTGATTATTAAGTCTTGAGCCATGACTTATTTCCAGTTTTCTTATTAACCTTCCTGAGCCCCTGACCTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGACTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGACTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAACCCCGACTTCATTTCCAGTTTTCTGATTATTAACATTCCTGAGCCCCGACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGACTTCATTTCCAGTTTCCGGATTATTAACATTCCTGAACCCCGACTTCTTTA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5083:HG4_PB_SVrefine2Falcon1Dovetail_10655:HG2_PB_SVrefine2PBcRplusDovetail_4666:HG2_PB_SVrefine2PB10Xhap12_12510:HG2_PB_SVrefine2Falcon2Bionano_8488;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5083:HG2_PB_SVrefine2PBcRplusDovetail_4666:HG2_PB_SVrefine2PB10Xhap12_12510:HG2_PB_SVrefine2Falcon2Bionano_8488;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00976563;ClusterMaxSizeDiff=0.0078125;ClusterMaxEditDist=0.0136719;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=513;DistBack=7578;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=3563;REFWIDENED=18:13672960-13676522;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2368.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:46:./.:4:24:4:2:./.:1:9:0:3:./.:0:6:0/1:6:11:.:.:.
chr18	54493508	HG2_PB_SVrefine2Falcon1plusDovetail_5211	TAATGAC	GGGCAGGTGGGTGGTAGAGGGAAGCCATCCTTGTGAGTGAATAACCTTCAGGATGAACTTAAAGTCTGGCCTTTTGTGAGCTGTGTAATAATAACTCATGGATAAGGGTGAATTACATTAGATTGTGGCACACTATTATATATCTATATATTACATGAATTGCCCTTATAATTGATATCAAACTCATATGACCAAAATTCACAAAAAAATA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10783:HG2_PB_assemblyticsfalcon_11639:HG2_PB_SVrefine2Falcon1plusDovetail_5211:HG4_PB_HySA_25351:HG3_PB_HySA_26251:HG4_PB_pbsv_17328:HG2_PB_pbsv_17427:HG3_PB_pbsv_17099:HG4_PB_SVrefine2PBcRDovetail_8716:HG3_PB_SVrefine2PBcRDovetail_8454:HG3_PB_SVrefine2Falcon1Dovetail_10766;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5211:HG2_PB_assemblyticsfalcon_11639;NumExactMatchSVs=2;ClusterMaxShiftDist=0.156682;ClusterMaxSizeDiff=0.156682;ClusterMaxEditDist=0.206897;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=204;DistBack=44;DistForward=106621;DistMin=44;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=214;REFWIDENED=18:54493294-54493507;PctSeqSimilarity=0.9818;PctSizeSimilarity=0.9315;PctRecOverlap=0;SizeDiff=-15;StartDistance=221;EndDistance=227;GTMatch=0;TruScore=63;MatchId=2417.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:41:48:./.:14:22:14:6:./.:18:23:21:0:./.:60:4:./.:.:.:.:.:.
chr18	70633761	HG2_PB_SVrefine2PB10Xhap12_12732	G	TGTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAATGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTTGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTAGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTCTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTTCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGACTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGGCATTGGTAGCTTGATGGGGATGGCATTGAATCGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCTTGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTGTAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGAGCTGCTGGATTCAGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTTGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAGCTATTGATTATTGCCACAATTTCAGCTCCTGTTATTGGTCTATTAAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTGAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCCAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGTGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCAGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAAGTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGAAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCTTTAGTTGATGCAGTTTCTTCCTACTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACTGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGGCCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTTGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCTTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTTGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATCGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGCTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGGAACTGCATTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGTTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGTTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACGCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCGCACACACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCAGGCTGGGAGCTGTAGACCGGAGCTGTTCTTATTCGGCCATCTTGGCTCCTCCGACAAATATATATTATAAACCAATATATACACCGTAAAAGCATTGCTTTACCTACACATTCTACCTAGAAAATAAAACTTTAAAATGCTGGTTTATAGGCCAAGAGCAGTGACTCATGCCTGTAATCCTAACACTTTGGAAGGCCAAGGTGGGAAGAGTACTTGAGTCCAAAATTTCAAGACCAGCCCGAGGAATATCGAAAGACCCCATCTCTATAAAAAATTTAAAAATTAGCCAAGCATGGTGGGCTTGAGGTGGGAGAATCTCTTGAGCCCAGGAGATTGAGGCTGCAGTGAGCTATGATTGTGCCATTGCACTCCAGCCCAGGCACTAGAGTGAGACTCTCTCTCTCTTTAAAAAAAGAAACGGTTTGTAAGTATATAACTTTGAACACATTCAGGTTTATCCTGGAGAAGCTATAGACATGTAAAATTAGGATACAAATTACTAGGTTTCATATAATATATAGTTAATATAATTACCTTTTTTAGTTACTTGTCTATTTTAAAGCAGATTTAAATGCAGATTTGTTTTCCAAATGAAATGCTATACATTTGGAAAATTTCTACCAGAAAAAAATCATGTCTCCTTGATTTAAATGACCTTTCTTATGCTATTTAACATAAGCTTACTAATCATTTATGAGAATATAAGAATATGCATAGAATAGAATGCTCTATCAATAATAATTTTGAAAATAATATCGTTGACCCCAAAATTATTTTTTGAATTATGTAATTTTAATGTTGGAAGGAATTTTTGAGGTTTTCAATATAGTCATTTAAACAGTATAGTATATTTTCTAGAAATACATGCTTATAAATTCTGTAGACTTAAAAATAATTATTTTGATAGAATCTATACAAAGTGCCTCATTAGAAAAATGAAGATGTCATTTTTGCAGGCAATACATGCCATATTTGAGTGTGTTACTCCAACCCATATCTGTAGAGTAACCCACACAGCTACCTGCTGTGAGCGAGGCCTGGAGCTAGAGAAGGCTCTGCAGCAAGTTCAGGCTGCAGAACAAGCTTCTGTAGCATGCCAGCAGCACCAGCAATACCCCAGGTGTCTGATGCAAACAGAGAGGCTGTATGGAGCCTCTGGCAAGCACCAATAGAGTCACCACATGAACCTTGAGGATACTGGAACAAATGTGTGCTCTTTTCTGCAAATAACAATTTTCTTTTTGGGATACAACTTTTGGCTTGCTACTGGGTCTTGTGGAAACTGGACACTTAACCAGGGTGACCGTATGACCTGAGCTTCCATCACTGAGTGGCTGTTGTTTGACTCACCCAGGCATACGTTTGGGTGCCTAGGGTAGCAAGCTATCATCGAATGCAGTGAGGTAAATGACTGACCTCAAGCAGGCCCTGAAGGTACAAATAAGTTGCAAGAACAGGTAGTTCAGACTCTTTCAACACAAACCACCATTTCATGGTCTCTTCACTCCCAATCCAAGTCTGTGGCTGTCTAGTTTATGGTAAATAGCTGGGAAACCACACACTCAAGCCTGTTTTATAGATGGTTTTCCATGATCTACTGGCACTACTCTAACAGGAGTAGCTGCAGCACTGTAGAAGTACTTCGGGGTGAACATGAAGGCCAGAGATGAAGGAAAATTTTCCCAGCAGGAAGAACATCGAGTACATTTGATGGTCCAATATTTCTGGAGTGAAAGGTAGACAGAAGCACTAATTTATAATAACTTATAAGGCTATTGCTAATGGTTTGGCTGGGGGTGGTCAGGAACTTGGAAGAAACAAGATTGAGCCATGGCCCAAGATCTGTGTTGGCCCCTTTCAGCCATGGCTGGAGCAGCTGGGACAGAGGGCACCAAATCCCTAGGCTGCACATAGCACAGGGACCCTGGTCCCGGCCCTGAAACCATTTTCTCCTAGGCCTCCTGGCCTGTGATGGGAGGGGCTGCCATGAAGATCTCTGACATGCCCTAGAGACATTTTCCCAGTTGATTTGGGGATTAATATTTGGCTCCTCGTTACTTATGTAAATTTCTGCAGCTGGCTTGAATTCATTCTCAGAAAATAGGTTTTTATTTTTTATTGCATTGTCAGGCTGCAAATTTTCCAAACTTTTATGCTCTGCTTCCCTTATAAAATTGAATGCCTTTAACAGCACCCAAGTCACCCCTTGAATGCTTTGCTGCTTAGAAATTTCTTCTTCTAGATACCCTAAATCATCTCTCTTAAGTTCAAAGCTTCACAAATCTCTAGGACAGGGAAAAATGCAGCCAGTCTCTTTGCTAAAACATAACAAGAGTCACCTTTGCTCCAGTTCCCAACAAGTTCTTCATCTCTATCTGAGACCAACTCAGCCTGAACTTTATTGTCCATATTGCTATCAGTATTTTGGGCAAAGCCATTCAGCAAGTCTCTAGGAAGTTCTAAATTTTCCCACATTTTCCTGTTTCTTCTGAGCCCTCCAAACTCTTCCAGCCTCTGCCTGTTACCCAGTTTCAAAGTCGCTTCCACATTTTTGGGTATCTTTTCAGCAGTGCCCCACTCTACTGGTACCAATTTACTGTATTAGTCCATTTTCACACTGCTGATAAAGACATACCTTAGATTGGGAAGAAAAAGAGATTTAATTGAACTTACAGTTCTACTTGACTGGGGAGGTCTCAGAATCATGGCAGGAAGTGAAAAGTACTTCTTACATGGTGGCATCAAGAGGAAAAATGAGGAATAAGCCAAAGCGGAAACCCCTGATAAACCCATCAGATCTTGTGAGACTTATTGACTAGCATGAGAATAGCACCAGAAAGACTGGCCCCCGTGATTAAATGACCTCCCCCTGGGTCCCTTCCACAACACGTGAGAATTCTGGTAGATACAATTCAAGTTCAGATTCGGGTGGGGACACAGACAAACCATATCACTCCCCAATATAGGATTATTCCTGGGTAGAGTAGCCTGACACCTGATGACAGGTGGATGGCATGAGGCCTCTGTCATCCCAAAATGATGACGATTTCCTCCCTAGAATACAGCCATGTTGTAGCGATGGAATTGCTTTCCCTGCTGGCGCCACCGTCTGTGAAGTCACAGAAAGCTGGGTTTGCCCTCGTGGTGTTCTTGATATCGTGTGAAGTGTCGAATTCATCTCCCAGTGAGAGAAACACATCTTAAGAGCTAGGCTGCTTCAGGTTGAGTCTCAGTGAAGACCTGAATAATGTAAGAAAAAGAAAACAACGTGTGAAGATCCAGGGGAAAATCTTCTCAGTCAGAGGGAAGACCAAGTGCAAAAATGCTGAGGTTAGAAAAAAATTAGCATGTTTAAAAAATGAAAAGGAAGTCGATAGGTCTGGAGTGGACTGACCAAGGAGACGTGGTTTAGAAGTGAGTTGGGAATGAAAAGCAGGGGCAAGGTCATAAGGGAATTTTTAGGTGGTGTTTCCTGTTGTTGTTGTTGCTTTGTTTTGTTTAGTTCAACTCTACAACTCTTTGGTGTGGTCATATCCACTAATGAGATAAAAACTGAAATCATGAACCTAATATCAAGCAAATGGCTAACTGGCCTCCAGAGAGATCTCATTCTAGGTTCTCAGCAAGTAACTCCACACATAGAGTTCTTCTCCTCTGTATTCACAATACGACACTCTGCCCTTGTGTTTCCTAAAGGCAACAAAATTTAAAATTACAGAATGATCCCTAAGCTAGAGACATGTGCCCATCAGAGAAAAAAGGAGACTAAACATTTCTTAAATCTCTACTCTTAAACTTCCAAATAGAAGGGATATATGGGGTTTCTACTATTTCACATATTTTTATGTTTCTTTCAAGACAATAAATTGTCTGGTAAATTATTTAAAAGGATATATCTCTATTATGCATGGAAACTGTTTCCACAGCTCAAACAGAAGTAAGTGCTTGAATTCGCAGCAGTACTTAATGTCTCCCAAATAACTGTATTCCGAATAATAGTGGGAGCAGTTTGACTCCAACCGAGAGGATAATCTCCTTTAACATTTCATGCACTTTTTTTTTTTTTTTTTTTTTTTTTTGCCAGATACCATATCATGTTTATAAGGAGCACGTCTATGGGAGTTACTATTTGGTAAGTCCTGAGTGTTTAACCTATACCTCCATGACTCCTCACGATAAACCAATGTGGACATTATTATCATGATCTTCTTTTCACAGATAGGAAACTGAAGCACTAAGAGACCAGGTAACCAGCCCAAGGTCACAGAAGTTATAAATGGAAGTAGCATGGCCCACATCTAAGCAGTCTGGCTTTAGAATTCTTGATTTTTCTGGATCCGTCAGAGAGAATGCAGATAGACTTTTGAATGTTTTCAAGTATAGCTTTGATGCTGACAAAAATAAGCATTGGTAGTGACAGATGGCTTTAAAATTTTAATGCTTTGGTGATTTTTATTGAAAACATAACTCAGCTTGACATAGATGTGAGAAGGAGCATAGTGGAGAGAAAGTGGACGGAGCATCTGATTCAGGAGACTTCACTGCAAGTCCTGGAACAGCCACTGGCTGGTGATCGCCAGAAAATTATTGTATTTCATTCTCATCTCTCAGAAGGAAAATACATACTTCTCACTAAATACCCAATGACCGTCTTTTATAGATTTTTTTGTTTTTGTTATTTTAATATTTGCTTTTTGTGTTTCTCTTAGGTTGACATTTAAGTTTCAGTATAACAACAAAAGAAATGTAATGGTAACTGACACATTTATGCAGTTTAAACTTGGAGAATGCTATAAATGTTAAACATTAATTCATCAATTAATTACAATCAATTTAAAGATTGAGGCACACCCAGATATTCTTGTGAGGACAAACTAAAGCAGGAGTGGTTTGCAACAGAAAGACCAGACTGGTCCCAGTCAGGGCTACACAGTATTTAAGGGTGCCCTGGCCCCTTAAGCTTCCCTTCTGTGCTCACCTCCACCCCTCCAGGACTTTTATGCCTGGGGGCTGCCCACACACAACTGCTCCAACACTACAGCCGGCTCTTCCAATAGCACAGACATTGCTTTCCTAAGCTCCACTCTGCCCTTGAAAATCCCTACTCAACAGGGCCCCGACAGTGAGCCCAAGAGATAGACTACCATCCAGCAATTCTGTTCAGTGGCAGGTAGGACAGAATAGTGAGCTGGATTGTATGAATCTCAGACAAACCCTTTGGGGAAGTGATTTGAAAAAGCCAATGTCATAGTACCCTCCAAAATGTACCGCATGCATAAACATCAGTGCATATAGATACACATTCTGGAAATAGACTTTAGCATAGGCTACCGGACAAAACTAATAACGCACCACTAAACAAGAAGTCCACAGACCCAAATGTCGTCCAGGTTGGACCTTTGCTTGTGTGATCTCGGGCAAGTCATATCAGTCCTCTGAATACCAGTTTATTTACAAAAAGCTACCATTTATCCCTATGAATTTATTTTGAGGATAAAAAAACTCCTCAAAATTATTGATTGATTATTTTAAAACAAGACAGTGCTATAATTTATTCATTAAAAACAAATAAAATTCTCTCTCTCTTTTAATATAAAACAATTACTTGCACCAATGACATTAATAGCTAAAAATTTAACATACAAATATAATTTTGCAAAGTCAAACAGAGATTAATCAAGTAATTCTTGGGGAAAAAACCCATCAAATCAAATATGTTAGCTAGAATAATATTGATTTAGAATAAATAAGTCACTTAAAATGGATATTAAACAATGCTAGTCAGATAATTAATAATTATGCTTCTTAAAACACTCATATAATACTTAGCTATTCTTATAACACCCTAAACATTAAACGTCCTCACATACTCTACCCCCCAGCTATTTTTTTGCATTAATGATAATATACTGATATACTGAATTTACTAGTGGATACATGTGCAACACAAATATATTTTGAAGCTCCCATGGCATTTTAGATGTAAGTAGCCTTGAATATTAGAACATAAAAATGGTACTAGAAGGTATACGATGAGAAGTACCTTCGTCTTAAAAAAAAGAAAAGTGCACAAGGATGTAGGTGCTCTTTCAAGTTGGATTAGGTCTCTCCGAAGTAGGTCAGTCTAGCCCTGTATATCCACAAAACCTTAGAAGGTGAATATAGAAAAAAAGAGCTAAATCCTGTGGCATGCATTAATCTCGGCTGAAGCTGAGGAGAGATACTTCAAGATGTCCCCTATAGTTTCTTTCCTAAAACAGTAACACATATTTAATACAATAGTAGGGACAGAAATTTGAATTCTTTCATTGACAAAGATTTACCATGAGCACATTTTTAAAAAGTTTTTTTACTTTAAAAATAGCTTAATGATTCATCACCAAGCAGTATAGTGTTTACCAAGTTGTCGATCCCCCAAACACCCATAGCTGGGTGACTACCTGAGTTACATATTAGAGACATAAATTCCTAGGCCCCATTCTCACAACCTCTGATCCAAGGAGGTCTGGTGTAGTTCTAGGAATCTGCATTTTAGCAATATTTCTAGTATCTTTCATGAAATGAAACTTGAGAATTACTGACTTCGCTATTATGGTTAGATACGAGTTTAAATACAGCTGTGCTGTACAAGCTGCAAAACCTTTGGATAAACATTTGACTGTCTTAGACCTCCGTGTAGCCATTTGAAAAATAAGCCAAAATATTTTATTCATAGGCCTGTAGTGATGTACACATGGGCAATCCTGTAAAATCTTTATCTTTTTGCTGGCTACCTATTGTGTACTCAGCAGGTGTTGCCATTATTATTAATCCTATTTAGTCTTTTCCATTAAAGTTAGTATTAAAGAAAATCAGTGTATTCTTTTTTTTTTTTACTTTATTTAGTGTTTTTTTCTCTTGTTCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12732:HG2_PB_PB10Xdip_14286:HG2_PB_SVrefine2PBcRplusDovetail_4844:HG4_PB_SVrefine2Falcon1Dovetail_10858:HG3_PB_SVrefine2PBcRDovetail_8519:HG3_PB_SVrefine2Falcon1Dovetail_10839:HG2_PB_SVrefine2Falcon1plusDovetail_5285;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12732;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00701262;ClusterMaxSizeDiff=0.00701262;ClusterMaxEditDist=0.0260398;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=12878;DistBack=36242;DistForward=5235;DistMin=5235;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5309;REFWIDENED=18:70643570-70639788;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2450.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:1/1:0:8:3:28:./.:1:2:2:5:0/1:4:14:1/1:1:164:.:.:.
chr18	76244897	HG2_PB_SVrefine2Falcon2Bionano_8628	G	GAGTCCACACTCTGTGCCTGCAGCCTCCTCCTGATGGTGTCCAAGTCTATACTCTGCGCCTGCAGACTCCTCCTGATGGGTGGCCAAGTCCACACTCTACCTGCAACCTCCTCCTGATGGGTGGCCAAGTCCACGCACTCCACCTGCAGCCTCCTCCTGATGGGTGGCCAAGTCCATGCTCTGCCTGCAGCCTCCTCCTGATGGGTGGCCAAGTCCACACTCTGCCTGCAGCCTCCTCCTGTTGGGTGGCCAAGTCCGCGCACTCCACCTGCAGCCTCCTCCTGATGGGTGGCCA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10919:HG2_PB_SVrefine2PB10Xhap12_12792:HG2_PB_SVrefine2Falcon2Bionano_8628:HG2_PB_HySA_32098:HG2_PB_SVrefine2Falcon1plusDovetail_5346;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8628;NumExactMatchSVs=1;ClusterMaxShiftDist=0.213382;ClusterMaxSizeDiff=0.213382;ClusterMaxEditDist=0.272;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=294;DistBack=-257;DistForward=14;DistMin=-257;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1772;REFWIDENED=18:76244898-76246669;PctSeqSimilarity=0.9623;PctSizeSimilarity=0.9966;PctRecOverlap=0;SizeDiff=-1;StartDistance=-978;EndDistance=-978;GTMatch=0;TruScore=65;MatchId=2465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:32:./.:14:12:12:4:0/0:12:0:8:0:0/0:24:0:./.:.:.:.:.:.
chr18	76724900	HG2_PB_SVrefine2Falcon2Bionano_8641	G	GCTGCACCAGCGCCGCCTTCTCCGGAGCCGTCGGTGGGACCCAGGCTGCCCCTCCACCCGGCCTGCACCAGCACTGCCTTCTCTGGGAGCCGTCGGTGGCACCCAGGCTGCCCCTCCACCCGGC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5751:HG3_PB_assemblyticsfalcon_11959:HG4_PB_SVrefine2Falcon1Dovetail_10938:HG3_PB_SVrefine2Falcon1Dovetail_10923:HG2_PB_pbsv_17641:HG3_PB_SVrefine2PBcRDovetail_8581:HG3_PB_pbsv_17327:HG2_PB_SVrefine2PBcRplusDovetail_4910:HG2_PB_SVrefine2PB10Xhap12_12811:HG2_PB_SVrefine2Falcon2Bionano_8641:HG2_PB_SVrefine2Falcon1plusDovetail_5358;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5751:HG3_PB_SVrefine2PBcRDovetail_8581:HG2_PB_SVrefine2PBcRplusDovetail_4910:HG2_PB_SVrefine2PB10Xhap12_12811:HG2_PB_SVrefine2Falcon2Bionano_8641:HG2_PB_SVrefine2Falcon1plusDovetail_5358;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0562249;ClusterMaxSizeDiff=0.0401606;ClusterMaxEditDist=0.357143;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=123;DistBack=-122;DistForward=1;DistMin=-122;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=429;REFWIDENED=18:76724901-76725329;PctSeqSimilarity=0.9814;PctSizeSimilarity=0.9919;PctRecOverlap=0;SizeDiff=1;StartDistance=-280;EndDistance=-280;GTMatch=0;TruScore=65;MatchId=2469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:42:1/1:3:16:0:12:./.:2:1:1:0:0/0:15:0:./.:.:.:.:.:.
chr18	76793223	HG2_PB_SVrefine2Falcon2Bionano_8643	T	TCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCATGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCCAACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCAGAGCCTTCCACAACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCAAGCCTTCCATGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCAAGCCTTCCAGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACAACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCATGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCATGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCAGAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12813:HG4_PB_SVrefine2Falcon1Dovetail_10940:HG2_PB_SVrefine2PB10Xhap12_12814:HG3_PB_SVrefine2Falcon1Dovetail_10925:HG2_PB_SVrefine2Falcon2Bionano_8643:HG2_PB_SVrefine2Falcon1plusDovetail_5361;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8643;NumExactMatchSVs=1;ClusterMaxShiftDist=0.069965;ClusterMaxSizeDiff=0.0687936;ClusterMaxEditDist=0.189432;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1032;DistBack=16061;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=4510;REFWIDENED=18:76793224-76797733;PctSeqSimilarity=0.4831;PctSizeSimilarity=0.2868;PctRecOverlap=0.2875;SizeDiff=736;StartDistance=-47;EndDistance=-47;GTMatch=0;TruScore=35;MatchId=2470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:12:26:./.:6:9:2:9:./.:1:4:0:5:1/1:0:12:0/1:10:8:.:12481:.
chr18	76795536	HG2_PB_PB10Xdip_14457	A	TTCAGTCCTCAGGCTGCCATGTCTCAGAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_14457:HG2_PB_PB10Xdip_14458:HG2_PB_PB10Xdip_14459:HG2_PB_PB10Xdip_14460;NumClusterSVs=4;ExactMatchIDs=HG2_PB_PB10Xdip_14457;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0272109;ClusterMaxSizeDiff=0.027027;ClusterMaxEditDist=0.204082;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=72;DistBack=-706;DistForward=1063;DistMin=-706;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=4525;REFWIDENED=18:76793224-76797748;PctSeqSimilarity=0.5431;PctSizeSimilarity=0.0973;PctRecOverlap=0.0985;SizeDiff=-668;StartDistance=-324;EndDistance=-324;GTMatch=0;TruScore=24;MatchId=2471.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:16:./.:6:9:5:1:./.:0:0:0:0:./.:0:0:./.:.:.:.:12481:.
chr18	76798596	HG2_PB_SVrefine2Falcon1plusDovetail_5362	A	AAGTACTGTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTGAGGTTCTCGTGGATGGTACTCTATGCTGAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCATGGATGGTATGGTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTGAGGTTCTCGTGGATGGTACTCTATGCTGAGGTTCTCGTGGATGGTACTCTATGCTGAGGTTCTCGTGGATGGTACTCTATGCTGAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTGATGGTACCACATGCTAAGGTTCTTGTGGATGGTACTCTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCATGGATGGTATGGTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGCTCTGATGGTACTATATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCATGGATGGTATGGTATGCTAAGGTTCTCATGGATGGTACTCTACGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCAGATGGTATTTTATGCTAAGGTTCTCAGATGGTATTTTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACAGTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTGAGGTTCTCATGGATGGTACTTTCTCGTGGATAGTACTATACTGCTAAGGTTCTTGCGGTTGGTACTCTATGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTCGTGGATGGTACTCTGTGCTAAGGTTCTCGTGGATGGTACTCTGTGCTAAGGTTCTTGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTTTCTCATGAATAGTACTGTACTACTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTTTCTCATGAAT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10942:HG3_PB_SVrefine2Falcon1Dovetail_10927:HG3_PB_pbsv_17328:HG4_PB_SVrefine2Falcon1Dovetail_10943:HG2_PB_pbsv_17642:HG3_PB_SVrefine2PBcRDovetail_8583:HG2_PB_SVrefine2PBcRplusDovetail_4912:HG2_PB_SVrefine2Falcon2Bionano_8644:HG2_PB_SVrefine2Falcon1plusDovetail_5362:HG2_PB_SVrefine2PB10Xhap12_12815:HG3_PB_SVrefine2Falcon1Dovetail_10926;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5362:HG2_PB_SVrefine2Falcon2Bionano_8644:HG2_PB_SVrefine2PBcRplusDovetail_4912;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0975976;ClusterMaxSizeDiff=0.0975976;ClusterMaxEditDist=0.263736;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=1375;DistBack=-766;DistForward=235;DistMin=-766;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1340;REFWIDENED=18:76798597-76799936;PctSeqSimilarity=0.9693;PctSizeSimilarity=0.9767;PctRecOverlap=0.5316;SizeDiff=32;StartDistance=-628;EndDistance=-628;GTMatch=0;TruScore=82;MatchId=2472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:22:0:7:./.:0:4:1:3:./.:1:2:1/1:2:77:.:12481:.
chr18	77068639	HG2_PB_SVrefine2PB10Xhap12_12820	T	TGAGGAGTGATCCCCAGTAGGTAGAAGGTCAGGGGTGGTGGAGTGATCCCCAGCAGGTAGAAGGTCAGGGGCTGAGGAGTGATCCCCAGCAGGTAGAAGGTCAGGGGCTGAGGAGTGATCCCCAGCAGGTAGAAGGTCAGAGGCTGAGGAGTGATCCCCAGCAGGTAGAAGGTCAGGGGCTGAGGAGTGATCCCCAGCAGGTAGAAGGTCAGGGGCTGAGGAGTGATCCCCAGCAGGTAGAAGGTCAGGGGCTGAGGAGTGATCCCCAGCAGGTAGAAGGTCAGGGGTG	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10933:HG4_PB_SVrefine2Falcon1Dovetail_10950:HG3_PB_pbsv_17333:HG3_PB_SVrefine2Falcon1Dovetail_10934:HG2_PB_SVrefine2PBcRplusDovetail_4916:HG2_PB_SVrefine2PB10Xhap12_12820:HG2_PB_SVrefine2Falcon2Bionano_8648:HG2_PB_SVrefine2Falcon1plusDovetail_5367;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8648:HG2_PB_SVrefine2PB10Xhap12_12820:HG2_PB_SVrefine2PBcRplusDovetail_4916:HG3_PB_SVrefine2Falcon1Dovetail_10934:HG4_PB_SVrefine2Falcon1Dovetail_10950;NumExactMatchSVs=5;ClusterMaxShiftDist=0.115132;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.271686;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=288;DistBack=-824;DistForward=-1;DistMin=-824;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1072;REFWIDENED=18:77068640-77069711;PctSeqSimilarity=0.9823;PctSizeSimilarity=0.9965;PctRecOverlap=0;SizeDiff=1;StartDistance=-360;EndDistance=-360;GTMatch=1;TruScore=65;MatchId=2474.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:./.:0:39:0:4:./.:0:0:0:1:./.:1:11:./.:.:.:.:.:.
chr18	77085833	HG2_PB_SVrefine2Falcon1plusDovetail_5368	T	TCTCTGCACACTCCATTCCTTCACATGGTGTTAGGGTGTCATCTCTGTACCCTCCGTCCCCTCACATGGTGTTAGGGTGTCATCTCTGTACCCTCCCTCCCCTCACATGGTGTTAGGGTGTCATCTCTGTACCCTCCCTCCCCTCACATGGTGTTAGGGTGTCATCTCTGTACCCTCCCTCCCGTCATATAGTGTTAGGGTGTCAC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5368:HG3_PB_SVrefine2Falcon1Dovetail_10936:HG2_PB_PB10Xdip_14474:HG2_PB_HySA_32125:HG4_PB_HySA_25664:HG2_PB_HySA_32124:HG2_PB_pbsv_17650:HG4_PB_pbsv_17547:HG3_PB_SVrefine2Falcon1Dovetail_10935:HG2_PB_SVrefine2Falcon2Bionano_8649:HG3_PB_SVrefine2PBcRDovetail_8588:HG4_PB_SVrefine2Falcon1Dovetail_10951:HG2_PB_SVrefine2PBcRplusDovetail_4917:HG2_PB_SVrefine2PB10Xhap12_12821;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5368:HG4_PB_SVrefine2Falcon1Dovetail_10951:HG2_PB_SVrefine2PBcRplusDovetail_4917:HG2_PB_SVrefine2PB10Xhap12_12821;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0710901;ClusterMaxSizeDiff=0.0673077;ClusterMaxEditDist=0.201923;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=205;DistBack=-491;DistForward=197;DistMin=-491;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=805;REFWIDENED=18:77085834-77086638;PctSeqSimilarity=0.9832;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-538;EndDistance=-538;GTMatch=0;TruScore=66;MatchId=2475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:61:1/1:6:21:2:19:./.:0:0:0:0:./.:3:0:./.:.:.:.:.:.
chr18	77116782	HG2_PB_SVrefine2Falcon2Bionano_8653	G	GGAGGGACCCTGTGTGAGGGGTGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGACCCTGTGTGAGGGGTGCTCTGGGTCTGGAGGTGTCCGTGTGAGGGACCCTGTGTGAGGGGTGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGACCCTGTGTGAGGGGTGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGGTGCCCTGGGTCTGGAGGTGTCCGTGTGAGGGACCCTGTGTGAGGGGTGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGGTGTCCTGGGTCTGGAGGTGTCCGTGTGAGGGACCCTGTGTGAGGGATGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGACCCTGTGTGAGGGGTGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGGTGCCCTGGGTCTGGAGGTGTCCGTGTGAGGGACCCTGTGTGAGGGGTGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGGTGTCCTGGGTCTGGAGGTGTCCGTGTGAGGGACCCTGTGTGAGGGATGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGGTGCCCTGGGTCTGGAGGTGTCCGTGTGAGGGACCCTGTGTGAGGGGTGCCCTGGGTCTGGAGGTGTCTGTGTGAGGGACCCTGTGTGAGGGGTGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGGTGTCCTGGGTCTGGAGGTGTCCGTGTGAGGGACCCTGTGTGAGGGATGCTCTGGGTCTGGAGGTGTCTGTGTGAGGGACCCTGTGTGAGGGGTGCCCTGGGTCTGGAGGTGTCTGTGTGAGGGGTGTCCTGGGTCTAGAGGTGTCCGTGTGAGGGACCCTGTGTGAGGGGTGCCCTGGGTCTGGAGGTGTCTGTGT	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8653:HG4_PB_SVrefine2Falcon1Dovetail_10955:HG3_PB_SVrefine2Falcon1Dovetail_10938:HG2_PB_SVrefine2Falcon1plusDovetail_5372:HG2_PB_SVrefine2PBcRplusDovetail_4921:HG2_PB_SVrefine2PB10Xhap12_12825;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8653:HG2_PB_SVrefine2PBcRplusDovetail_4921:HG2_PB_SVrefine2PB10Xhap12_12825;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0829187;ClusterMaxSizeDiff=0.0829187;ClusterMaxEditDist=0.103353;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=868;DistBack=6;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1125;REFWIDENED=18:77116783-77117907;PctSeqSimilarity=0.9467;PctSizeSimilarity=0.8606;PctRecOverlap=0;SizeDiff=121;StartDistance=-1527;EndDistance=-1527;GTMatch=0;TruScore=60;MatchId=2476.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:./.:0:12:0:0:./.:0:0:0:0:1/1:0:26:0/1:3:15:.:1151:.
chr19	423099	HG2_PB_SVrefine2PB10Xhap12_12891	T	TCCTCCAGCTCCTGGTCCTGGGGGGTCCTCCCGCCCTGACCCTCACTCCCTGGTCTCCCGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12891:HG2_PB_PB10Xdip_15103:HG2_PB_PB10Xdip_15104:HG2_PB_SVrefine2PBcRplusDovetail_4972:HG2_PB_pbsv_17726;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12891:HG2_PB_SVrefine2PBcRplusDovetail_4972;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.302521;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=61;DistBack=-11108;DistForward=-1;DistMin=-11108;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=591;REFWIDENED=19:423100-423690;PctSeqSimilarity=0.995;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-241;EndDistance=-241;GTMatch=0;TruScore=66;MatchId=2488.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:24:./.:10:4:2:4:./.:1:0:0:0:0/0:12:0:./.:.:.:.:.:.
chr19	2281102	HG2_PB_SVrefine2PBcRplusDovetail_5016	A	ACCCTGCTGTGTGATCCCGAGTGGGTTTCCTGTCCTCTCTGGGCCCCTGCTGTGTGATCCCGAGTGGGTTTCCTGTCCTCTCTGGGCCCCTGCTGTGTGATCCCGAGTGGGTTTCCTACTCTCTCTGGGC	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5016:HG2_PB_HySA_32327:HG3_PB_assemblyticsfalcon_12151:HG3_PB_SVrefine2Falcon1Dovetail_11055:HG4_PB_pbsv_17713:HG4_PB_HySA_25827:HG2_PB_pbsv_17798:HG4_PB_SVrefine2PBcRDovetail_8910:HG4_PB_SVrefine2Falcon1Dovetail_11055;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5016:HG4_PB_SVrefine2PBcRDovetail_8910;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0536398;ClusterMaxSizeDiff=0.0536398;ClusterMaxEditDist=0.342205;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=129;DistBack=33974;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=315;REFWIDENED=19:2281103-2281417;PctSeqSimilarity=0.9687;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-221;EndDistance=-221;GTMatch=0;TruScore=65;MatchId=2508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:38:./.:4:7:3:2:./.:1:0:1:0:0/0:18:0:./.:.:.:.:.:.
chr19	2939268	HG2_PB_SVrefine2Falcon1plusDovetail_5477	A	GCCACCCTTACCCAAGGAGGCAGTGAGGGAATGACGCCACCCTTACCCAAGGAGGCAGTGAGGGAATGACGCCACCCTTACCCAAGGAGGCAGTGAGGGAATGACG	10	PASS	ClusterIDs=HG3_PB_pbsv_17517:HG2_PB_SVrefine2PB10Xhap12_12964:HG2_PB_SVrefine2Falcon1plusDovetail_5477:HG2_PB_SVrefine2PBcRplusDovetail_5028:HG2_PB_pbsv_17813:HG2_PB_SVrefine2PB10Xhap12_12963;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5477:HG2_PB_SVrefine2PB10Xhap12_12964;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0380952;ClusterMaxEditDist=0.285714;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=105;DistBack=-1;DistForward=20;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=288;REFWIDENED=19:2939002-2939289;PctSeqSimilarity=0.9943;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=157;EndDistance=157;GTMatch=1;TruScore=66;MatchId=2510.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:55:1/1:5:21:1:28:./.:1:0:2:0:./.:8:0:./.:.:.:.:.:.
chr19	7515014	HG4_PB_SVrefine2Falcon1Dovetail_11112	A	ACCGAGATGTTAATGCAGGATCTTGCTGTCCATTTCCGAGATGTTAATACGCAATCTTGCTGTCCATTTCCGAGCTGTTAATGCGGTATCTCGCTTTCTGTTTCTGAGATGTTAATACAGGCTCTTGCTGTCCATTTCCGAGATGTTAATATGGGATCTTGCTTTCTGTTTCCATTTCCAAGACGTTAATACAGGATCTTGCTGTCCATTTCCAAGATGTTAATGCGGGATCTTGCTGTCCGTTTCTGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCAAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTTTCCGTTTCCGTTTCCGAGATGTTAATACGGATCTTGCTGTCCATTTCCGAGATGTTAATACAGGATCTTGCTTTCTGTTTCCATTTCCGAGGTGTGAATGTCGATCTTGCTTTCTGTTTCCAAGACATTAATATGGGATCTTGCTTTCCATTTCCATTTCCAAGATGTTAATACGGGATCTTGCTGTCCATTTCCGAGATGTGAATGCAGGATCTTGCTGTCCGTTTCTGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCAAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGTTTCCAAGATGTTAATACGGGATCTTGCTGTCCATTTCCGAGATGTTAATACAGGATCTTGCTTTCTGTTTCCATTTCCGAGATGTTAATGTGGATCTTGCTATCTGTTTCCGAGACATTAATATGGATCTTGCTTTCCGTTTCCATTTCCAAGATGTTAATACGGGATCTTGCTGTCCATTTCCGAGATGTGAATGCAGGATCTTGCTGTCCGTTTCTGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCAAGATGTTAATGCAGGATCTTGCTTTCCGTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAATACAGGATCTTGCTTTCTGTTTCCATTTCCGAGATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATGTTAATACGGGACCTTGCTGTCCCCAAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAACACGGGATCCTGCTGTCCGTTTCCGAGATGTTAACGCGGGATCCTGCTTTATTTCCGAGATGTTAACGCGGGATCCTGCTTTCCGTTTCCGAGATGTTAACGCGGGATCCTGCTGTCCGTTTCCGAGATGTTAACGCGGGATCCTGCTGTCCGTTTCCGAGATGTTAACGCGGGATCCTGCTGTCCGTTTCCGAGATGTTAACGCGGGATCCTGCTGTCCGTTTCCGAGATGTTAACGCGGGATCCTGCTGTCCGTTTCCGAGATGTTAACGCGGGATCCTGCTGTCCGTTTCCGAGATGTTAACGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAACGCGGATCTTGCTTTCCGTTTCCGAGATGTTAACGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCGTTTCTGAGATGTTAGTGTGGATCTTGCTCTCCGTTTCCGAGATGTTAATACGGGATCTTGCTTTCTGTTTCCGCGATGTTAATGTGGGATCTTGCTCTCCGTTTCCCATATGTTAATACGGGATCTTGCTTTCTGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCTGAGATGTTAATGTGGATCTTGCTGTCTGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCGAGATGTTAATTGTGGATCTTGCTTTCCGTTTCCAAGATGTTACTGCGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGGTAATACGGGATCTTGCTGTCCGTTTCCGAGGTGTTAATGTGGGATCTTGCTTTCCGTTTCCGAGATATTAATACGGGATCTTGCTGTCCATTTCCGATATGTTAATGTGGGATTTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATGTTAATGTGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAACACGGGATCTTGCTGTCCATTTCCGAGATGTTAATGCGGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTGATTTCTGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCATTTCCAAGATGTTAATGTGGATCTTGCTCTCTGTTTCCGAGATGTTAATACGGGATCTTGCTCTCCGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCATTTCTGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCAGGATCTTGCTTTCCGTTTCCGAGATGTTAACGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCATTTCCAAGATGTTAATTGTGGATCTTGCTTTCCATTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCAAGATGTTAATTGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCCTTTCCGAGATGTTAATATGGGAACTTGCTGTCCGTTTCCGAGATGTTAATGTGGGATCTTCCTGTCCATTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCAAGATGTTAATGTGGATCTTGCTTCCATTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGTTTCCAAGATGTTAATATGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCATTTCCCAGATATTAATGCGGGATCTTGCTTTCCGTTTCCGTTTCCGAGATGTTAATATGGGATCTTGCTGTCCGTTTCCGAGATGTTAATACAGGATCTTGCTTTCTGTTTCCATTCCGAGATGTTAACGCGGGATCCTGCTGTCCGTTTCCGCGATGTTAACACGGATCTTGCTGTCCGTTTCCGAGATGTTAACGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAACGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAACGCGGGATCTTGCTATCCGTTTCCAAGATGTTAACGCGGGATCTTGCTGTCTGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTCCCGAGATGTTAATGCGGGATCTTGCTTTCTGTTTCCACGATGTTAATGTGGGATCTTGTTGTCCATTCCGAGATGTTAATGCGGGATCTTGCTTTCTGTTTCCACGATATTAATGTGGGATCTTGCTGTCTGGTTCTGAGATGTTAGTGTGGATCTTGCTCTCCGTTTCCGATATGTTAATACGGGATCTTGCTTTCTGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCGAGATGTTAATGCGGAATCTTGCTTTCTGTTTCCACGATGTTAATGTGGGATCTTGCTGTCTGGTTCTGAGATGTTAGTGTGGATCTTGCTCTCCGTTTCCGATATGTTAATACGGGATCTTGCTTTCTGTTTCCGCGATGTTAATGTGGATCTTGCTCTCCGTTTCCGATATGTTAACACGGGATCTTGCTTTCTGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCTGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCATTTCCGAGATGTTAATTGTGGATCTTGCTTTCCGTTTCCAAGATGTTACTGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGATCTTGCTGTCCATTTCTGATATGTTAATGTGGGATTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATATTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGAGATGTTAATATGGGATCTTGCTTTCCATTCCGAGATGTTAATGCGGGATCTTGCTGTCCATTTCCGAGATGTTAAACGGGATCTTGATTTCTGTTTCCGCGATGTTAATGTGGGACTTGCTGTCCGTTTCCAAGATGTTAATGGGATCTTGCTCTTGTTTCCGCGATGTTTAATGGGGATCTTGCTCTCTGTTTCCGCGATTTTAATGTGGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCAGGATCTTGCTTTCCGTTTCCGAGATGTTAACGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCAAGATGTTAATTGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGACCTTGCTTTCCGTTTCCGAGATGTTAATACGGGAACTTGCTGTCCGTTTCCGAGATGTTAATGTGGGATCTTACTGTCCATTTCCGAGATGTTAATGTGGGATCTTCCTTTCCGTTTCTGAGATGTTAATGCGGGATCTGCTTTCCGTTTCCGATATGTTAACACGGACCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCGCCATTTCCGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTGGCTTTCCGTTTCCGAGATGTTAATGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGATATTGCTGTCCGTTTCCAAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTCCTTTCCGTTTCCGATATGTTAATACGTGATCTTGCTTTCCGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCATTTCGCGAGATGTTAATGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTATACGGATCTTGCTTTTCGTTTCCGAGATGTTAATACGGGTCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAAGGCGGATCTTGCTGTCCGTTTCCGATAGTGTTAATGCGCGGATTCTTGCTTTTCCGTTTCCGAATGTTAATGCGGGATCTTGCTGTCCATTTCGATATGTTAATTGCCGCGATGTTAATGTGGGATCTTGCTGTCCGATTCCGAGATGTTAGTGTGGATCTTGCTCTCCGTTTCCGAGTGTTAATACGGGATCTTGCTTCTGTTTCCGCGATGTTAATATGGGATCTTGCTGTCCGCTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTGCCGAGATGTTAATGCGGCATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCTGTTTCCGACATGTTAATGTGGGATCTTGCTGTCCATTTCCGAGATGTTAATTGTGGATCTTGCTTTCCGTTTCCAGATGTTAATGCGGGATCTTGCTCTCCGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCATTTCCGATATGTTAATACGGATCTTGCTTTCCATTTCCGAGATGTTAATGCAGGATCTTGCTTTCGTTTCCGAGTGTTAATACGGGATCTGCTGTCCGTTTCCGGTGTTAATTGGCATCTTGCTTCCGTTTCCGAGATGTTAATACGGGATCTTTGCTGTCATTTCCGAGATTTAATGTGGATCTTGCTTGTCCATTTCCGAGTTGTTAATGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTCCGAGATGTTAATACGGGATCTTGTGTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGTTTCCGTTTCCAGATGTTAATACGGGATCTGCTGTCCATTTCCGAGTGTTAATGCGGGATCTTGCTGTCCGTTTCGAGATGTTAATCTGGATCTTGCTTTCCATTTCCAAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCTGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCAAGATGTTAATGTGGATCTTGCTGTCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCTTTTCCGATGTTAATGTGGATCTAGCTTCCGTTTCCGAGATGTTAGTGGATCTTGCTTTCCTGTTTCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGATATATTTAATACGGGATCTTGCTTCCGTTTCCGAGATGTTAATGTGGATCTTCCTTTCCGTTTCCTGAGATGTTAATGTGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTGCTGTCCTTTCGAGATGTTAACGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAAGTGGGATCTTGCTGTCCATTTCCTAGATGTTAATGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGTTAATACGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGGATCTTCCTTTCCGTTTCTGAGATGTTAATGCGGGATCTTGCTTTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTGTTCCGTTTCCGAGATGTTAATGTGGATCTTCCTTTCCGTTTCTGAGATGTTAATGCGGGATCTTGCTTTCCAGTTTCCGATATGTTAATACGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGGCTGTCAGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAATGTTAATGCGGGATCTTCCTTTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTTTCCGTTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCATTTCCCGAATGTTAATGTGGATCTTGCTGTCCGTTTCCAAGATGTTAAGTGGATCTTGCTGTCCATTTCCGATATGTTAATATGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTACGTTTCCGAGATGTTAATGGGATCTTGCTGCCGTTTCCGAGATGTTAATACGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGATATGTTAATGCGGGATCTTGCTTTCCGTTTCCGCGATGTTAATGTGGGTCTTGCTGTCCATTCCGAGATGTTATGTGGATCTTGCTTCCGTTTCCGAGATGTTAAACGGGATCTTGCTTTCTGTTTCCGCGATGTTAATGTGGGATCTTGTTGTCCTTTCCAATATGTTAATACGGGATCTTGTGTCCATTTCCAATATGTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCGAGATGTTAATTGTGGATCTTGCTTCCGTTTCCAAGATGTTAATGTGGATCTTGCTTCTCCGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTCCTTTCCATTCCGAGATGTTAATGCAGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTTTCGTTTCCGCGATGTTAATTGGGATCTTGCTGTCCGCTTCCGATATATTAATACGGGATCTTGCTTTCTGTTTCCGAGATGTTAATGCGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCTGTTTCCGACATGTTAACGTGGATCTTGCTGTCCATTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGATGTTAATACGGGATCTTGCTTTCTGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGATCTTGCTGTCTTTTCCGAGATGTTAATGGGATCTTGCTGTCCATTTCCAAGATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATGTTAATGCGGATCTTGCTTTCCGTTTCCGAGATGTTAATTTGGGATCTTGCTGTCCATTTCCGAGATGTTAATGTGGATCTTGCTTCCATTTCCGAGTTGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTTTCCGTTTCTCAGATGTTAATACGGATCTTGCTGTCCGTTCCGAGTTGTTAATGGGATCTTGCTTCCGTTTCCGAGATGTTAATCTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCTGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCAAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCTTTTCCGAGTGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGCTAATACGGGATCTTGCTGTCCATTTCCGATATTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTCCTTTCCGTTTCTGAGATGTTAATGTGGATCTTGCTTTCCATTTCCGATATGTTAATACGGGATCTTGCTGTCCTTTCCGAGATGTTAACGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAACTGGGATCTTGCTGTCCATTTCCTAGATGTTAATTGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGATATGTTAATACGGATCTTGGTTTCCGTTTCCGAGATGTTAATGTGGATCTTCCTTTCCGTTTCTGAGATGTTAATGCGGGATCTTGCTTTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGTATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTGGTATCCGTTTCCGAGATGTTAATGTGGATCTTCCTTTCCGTTTCTGAGATGTTAATGCGGGATCTTGCTTTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATGGATTGCTGTCAGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGATATGTTAATGCGGGATCTTCCTTTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTTTCCGTTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCCGATGTTAATGTGGGATCTTGCTGTCCATTTCCACGATGTTAATGTGGATCTTGCTGTCCGTTTCCGATGTTAATGTGGATCTTGCTGTCCATTTCCGATATGTTAATATGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGGTCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTACGTTTCCGAGATGTTAATACGGGTCTTGCTGCCCTTTTCCGAGATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCATTTCCGATATGTTAATGCGGGATCTTGCTTTCGTTTCGGCGATGTTAATGTGGGATCTTGCTGTCCGTTTCCGAGATGTTAGTGTGGATCTTGCTCTCCGTTTCCGAGATGTTAATGGGATCTTGCTTTCAGTTTCCGCAATGTTAATTGGGATCTTGCTGTCCATTTCCAATATGTTAATACGGGATCTTGCTTTCTGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCTGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCGTTTCCGAGATGTTAATTGTGGATCTTGCTTTCCGTTTCCAAGATGTTAATGCGGTATCTTGCTCTCCGTTTCTGCGATGTTAATGTGGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCTGAGATGTTAATGCAGGATCTTGCTTTCCGTTTCTGAGATGTTAATATGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGATATGTTAATGTGGGATTTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATGTTAATGTGGGATATTGCCGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATGTTAATACGTGATCTTGCTGTCCATTTCCGAGATGTTAATATGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCGAGATGTTAATGTGGGATTTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATGTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCGGAGATGTTAATACAGGATCTTGCTGTCCATTTCCGATATGTTAATACGGGATCTTGGTTTCCGTTTCCGAGATGTTAATGTGGATCTTCCTGTCCGTTTCCGAGATGTTAATACGGGGTCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGACCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCTGTTTCCGAGATGTTAATACGGGATCTTGCTTTCTGTTTCCGCGATGTTAATGTGGGATCTTGCTGTCCGTTTCCGAGATGTTATGTGGATCTTGCTCTCCGTTTCCGAGATGTTAATACGGGATCTTGCTTTCTGTTTCCGCGATGTTAATGTGGGATCTTCCTGTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCTGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCAAGATGTTAATGCGGATCTTGGTGTCTGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCATGCTGTCTGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCTAGATGTTAATTGTGTATCTTGCTTTCCGTTTCCAAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCTTTTCCAAGATGTTAATACGGGATCTTGCTGTCCATTTCCGATATGTTAATGTGGGATTTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATCTTAATTGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGATATGTTAATACGGGATATTGGTTTTCGTTTCCGAGATGTTAATGTGGGATCTTCCTTTCCGTTTTTGAGATGTTAATGCGGGATCTTGCTTTCCATTTCCGATATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTTTCCGTTTCCGCGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTTTCCGTTTCCGCGATGTTAATGGGATCTTGCTGTCCATTTCCGAGTGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGGTCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGACCTTGCTGTCCGTTTCCAAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGAGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCAGGATCTTGCTGTCCATTTCCGATATGTTAATGCGGGATCTTGCTTTCAGTTTCCGCAATGTTAATTTGGGATCTTGCTGTCCATTTCCGAGATGTTAGTGTCGATCTTGCTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTTTCCGTTTCCGCGATGTTAATGTGGATCTTGCTTTCCATTTCCGATATGTTAATACGGGATCTTGCTTCTGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCTGTTTCCGAGATGTTAATTTGGGATCTTGCTGTCCATTTCCGAGATGTTGATTGTGGATCTTGCTTTCCGTTTCCAATATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCTGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTTTCCGTTGCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCCGATATGTTAATGCGGGATCTTGCTGTCCGTTTCTGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCAAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATTTGGGATCTTGCTGTCCGTTTCCGAGGTGTTGATGTGGATCTAGCTTTCCGTTTCCGAGATATTAATGTGGATCTTGCTTTCCATTTCCGAGATGTTAATACGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTTCTGACATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATGTTAATACGGGATCTTACTGTCCGTTTCCGAGATGTTAATGTGGCATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCGTTTCTGAAATGTTAATGCGGGATCTTGCTGTCCGTTTCTGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATAAGGATCTTGCTGTCCATTTCCGAGGTGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATACGGGAGCTTGCTTTCCGTTTCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGACGTTAATGCGGGATCTTGCTTTCCGTTTCCGATATGTTAAACGGGATCTTGCTTTCCGTTTCCGCGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGGATTTGCTGTCCGTTTCCGAGATGTTAATGTGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGATCTTGCTTTCCGTTTCCGCGATGTTAATGGGATCTTGCTGTCCATTTCCGAGATGTTAATGTGGATTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATACGGGTCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTGTCCGTTTCCGAGTGTTAATGCAGGATCTTGCTTTCTGTTACCGAGATGTTAATACGGGATCTTGCTGTCCATTTCCGATATGTTAATGTGGGATTTTGCTGTCCGTTTCCGAGATGTTAGTGTGGATCTTGCTTTCCATTTCCGAGATGTTAATGTGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCGAGATGCTAATACGGGATCTTGCTGTCCATTTCCGAGATGTTAATATGGGATCTTGCTTTCCATTTCCGAGATGTTAATGCGGGATCTTGCTGTCCATTTCTGATATGTTAATACGGGATCTTGCTTTCTGTTTCCACGATGTTAATGTGGGATCTTGCTGTCCGTTTCCAAAATGTTAATGGGATCTTGCTCTCCTTTTCCGAGATGTTAATACGGGATCTTCCTCTCCATTTCCGCAATGTTAATGTAGGATCTTGCTGTCCATTTCCGATATGTTAATACAGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCAGGATCTTGCTTTCTGTTTCCGAGATGTTAACGCGGGATCTTGCTGTCCGTTTCCGATGTTAATGTGGGATCTTGCTGTCCATTTCCAAGATGTTAATTGTGGATCTTGCTTTCCGTTTCCGAGATGTTAATGCGGGATCTTGCTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCCGTTTCCAAGATGTTAATACGCGATCTTGCTGTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCGATATGTTAATGTGGGATCTTGCTGTCCATTTCCAAGATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATGTTAATGCGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATTTCCGAGATGTTAATGTGGGATCTTGCTGTCCATATGTTAATGTGGATCTTGCTTTCCATTTCCGAGATTTAATGGGGATCTTGCTTTCCGTTTCCGAGATGTTAATGTGGATCTTGCTTTCTGTTTCCGAGATGTTAATACGGGATCTTGCTGTCCATTT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11112:HG2_PB_PB10Xdip_16212:HG2_PB_SVrefine2PB10Xhap12_13021:HG2_PB_SVrefine2Falcon2Bionano_8767:HG2_PB_SVrefine2PBcRplusDovetail_5075:HG4_PB_SVrefine2PBcRDovetail_8957:HG3_PB_SVrefine2Falcon1Dovetail_11093:HG2_PB_SVrefine2Falcon1plusDovetail_5527;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_11112;NumExactMatchSVs=1;ClusterMaxShiftDist=0.209028;ClusterMaxSizeDiff=0.208966;ClusterMaxEditDist=0.257132;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=16563;DistBack=-1;DistForward=548;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=871;REFWIDENED=19:7515015-7515885;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2532.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:./.:1:1:0:6:./.:2:0:0:0:./.:1:0:1/1:3:459:.:17422:.
chr19	39164082	HG4_Ill_150bpfermikitraw_22502	T	TATATATATATATTCATATATATTTATATATATGAATATATATTTATATATATTC	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22357:HG3_Ill_svaba_22444:HG3_Ill_150bpfermikitraw_22384:HG2_PB_HySA_32904:HG4_Ill_svaba_22207:HG4_Ill_Krunchall_24429:HG4_Ill_GATKHCSBGrefine_12233:HG4_Ill_250bpfermikitraw_23388:HG4_Ill_150bpfermikitraw_22502:HG2_Ill_svaba_22228:HG2_Ill_manta_4819:HG2_Ill_Krunchall_24075:HG2_Ill_GATKHCSBGrefine_11843:HG2_Ill_250bpfermikitraw_23732;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22357:HG4_Ill_svaba_22207:HG4_Ill_Krunchall_24429:HG4_Ill_GATKHCSBGrefine_12233:HG4_Ill_250bpfermikitraw_23388:HG4_Ill_150bpfermikitraw_22502:HG2_Ill_svaba_22228:HG2_Ill_manta_4819:HG2_Ill_Krunchall_24075:HG2_Ill_GATKHCSBGrefine_11843:HG2_Ill_250bpfermikitraw_23732;NumExactMatchSVs=11;ClusterMaxShiftDist=0.2;ClusterMaxSizeDiff=0.2;ClusterMaxEditDist=0.2;PBcalls=1;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=54;DistBack=68932;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=32;REFWIDENED=19:39164081-39164115;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2617.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:21:./.:30:1:13:19:./.:1:4:10:0:0/1:24:12:./.:.:.:.:.:.
chr19	51483819	HG3_PB_SVrefine2Falcon1Dovetail_11322	T	TGGGGACAGAGACCCAAGAGAGAGGGGGGACAGAGACACAGAGAGAGAGGGGAGACAGAGACCAGAGAGAGGGAACAGAGATCCAGAGAGAGAGGGGACAGAGCCCCAGAGAGAGGGAGACAGAGACCCAGAGAGGGGGGACAGAGACCCGAGAGAGAGGGGGGAGAGAGACACAGAGATAGGAGGGGGACAGAGACACAGAGAGAGGAGGGAGAGAGACACAGAGAGAGGAGAGGGACAGAGACCCAGAGAGAGGGGAACAGAGACCCAGAGAGAGAGGGGACAGAGATCCAGAGAGAGAGGGACAGAGACCCAGAGAGAGAGGACAGAGACCAGAGAGGGGAACAGAGACCAGAGAGAGAGGGGACAGAGCCCAGAGAGAGGAAGACAGAGAGCCAGGAGAGAGGGGACAGAGCCCCAGGGAGAGGGGACAGAGATCCGGAGAGAGAGGAGGGGAACAGAGACCAGAGAGAGAGGGGAACAGAGACCCAGAGAGAGAGGGACAGAGACCCACAGAGAGAGGA	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11322:HG4_PB_SVrefine2PBcRDovetail_9151:HG3_PB_SVrefine2PBcRDovetail_8929:HG4_PB_SVrefine2Falcon1Dovetail_11338:HG2_PB_SVrefine2PB10Xhap12_13323;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11322;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0465983;ClusterMaxSizeDiff=0.0465983;ClusterMaxEditDist=0.0465983;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=523;DistBack=4891;DistForward=279;DistMin=279;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1116;REFWIDENED=19:51483820-51484935;PctSeqSimilarity=0.9666;PctSizeSimilarity=0.9356;PctRecOverlap=0;SizeDiff=-36;StartDistance=-806;EndDistance=-806;GTMatch=1;TruScore=63;MatchId=2657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:36:./.:8:8:6:8:./.:39:3:33:0:0/0:21:0:0/1:17:5:.:.:.
chr19	51860305	HG4_PB_SVrefine2Falcon1Dovetail_11344	T	TCTGCAAAGACCCTGTTTCTAATTTCTTTTTTTTTTTTTTTTAGATGGGCTCTCGCTCTGTCGCCCAGGCTGGAGTACAGTGGTGAAATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTTGCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCATCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGATGATCTGCTCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATAAGCCAACATGGCCAGC	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11344:HG2_Ill_breakscan11_4863:HG2_PB_pbsv_18261:HG4_PB_pbsv_18183:HG2_PB_HySA_33124:HG4_PB_SVrefine2PBcRDovetail_9155;NumClusterSVs=6;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_11344:HG4_PB_SVrefine2PBcRDovetail_9155;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0982143;ClusterMaxSizeDiff=0.0833333;ClusterMaxEditDist=0.270833;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=321;DistBack=3130;DistForward=302;DistMin=302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=342;REFWIDENED=19:51860306-51860647;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.9698;PctRecOverlap=0.006;SizeDiff=-10;StartDistance=-324;EndDistance=-324;GTMatch=0;TruScore=64;MatchId=2658.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:16:./.:10:6:9:5:./.:3:0:1:4:./.:3:1:./.:1:5:.:.:.
chr19	54322665	HG4_PB_SVrefine2Falcon1Dovetail_11356	A	ATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATACATATGTTTATATATATGTATACATATGTGTATATATGTGTGTATGTATACGTATATACATGCGTATATATGTATGTATACGTATATACATGCGTATATATGTATGTATACGTATATACATGCGTATATATGTATGTATACG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11336:HG4_PB_SVrefine2Falcon1Dovetail_11356:HG2_PB_SVrefine2Falcon1plusDovetail_5780:HG2_PB_SVrefine2PB10Xhap12_13342:HG2_PB_SVrefine2PBcRplusDovetail_5324:HG2_PB_SVrefine2Falcon2Bionano_8981:HG2_Ill_SVrefine2DISCOVARplusDovetail_6198;NumClusterSVs=7;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_11356;NumExactMatchSVs=1;ClusterMaxShiftDist=0.15677;ClusterMaxSizeDiff=0.15677;ClusterMaxEditDist=0.166271;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=206;DistBack=-275;DistForward=20;DistMin=-275;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=269;REFWIDENED=19:54322666-54322934;PctSeqSimilarity=0.8922;PctSizeSimilarity=0.9364;PctRecOverlap=0;SizeDiff=-14;StartDistance=-245;EndDistance=-245;GTMatch=1;TruScore=60;MatchId=2665.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:1:23:2:19:./.:1:23:6:49:1/1:0:33:./.:.:.:.:.:.
chr20	4205351	HG2_PB_HySA_33364	A	AGGCCAGGGGTGTTCCATCCTGGATAGAGGCTGCAGGTGCTGAGACAAGCGCAGGTGTTCCATCCTGGATAGAGGCTGCAGTCCTGTGAGACAAGC	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11451:HG2_PB_HySA_33364:HG3_PB_SVrefine2Falcon1Dovetail_11426:HG4_PB_pbsv_18354:HG2_PB_pbsv_18437;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_33364;NumExactMatchSVs=1;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.298077;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=95;DistBack=-1;DistForward=2947;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=173;REFWIDENED=20:4205189-4205361;PctSeqSimilarity=0.9736;PctSizeSimilarity=0.8796;PctRecOverlap=0;SizeDiff=-13;StartDistance=163;EndDistance=163;GTMatch=0;TruScore=61;MatchId=3118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:25:./.:7:19:19:3:0/0:12:0:19:0:0/0:27:2:./.:.:.:.:.:.
chr20	42324883	HG2_PB_SVrefine2Falcon2Bionano_9200	C	CTTTTTTTTTTTTTTGAGACGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGTATGATCTTGGCTCACCGCAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTGCCGAGTAGCTGGGATTACAAGCATGTGCCACCATGCCTGGCTAATTGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACCTTGGCCTCCCAAAATACTGGGATTACAGGCGTGAGCCACCACACCAGGCTTAAAATTAGACGATGTCTTACTCTTTTACAACTTTCTTTTTCTATTTAACATATCGTTCCATGTTGTTATGTGTATTCAGATCTCCAACATTCCTGAATTTGCCGTATCTTATTTAACCATTATATTGTCAAACATCTGTTACTATTTCCATCAATGCTATAATGATCATCATTGTTCAGTTTCTTTGTACATTTGCTGAACTGTGTGGTTGA	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11583:HG2_PB_pbsv_18652:HG3_PB_pbsv_18339:HG2_PB_PB10Xdip_18340:HG4_PB_pbsv_18581:HG3_PB_HySA_27857:HG2_PB_HySA_33774:HG4_PB_HySA_26925:HG4_PB_SVrefine2Falcon1Dovetail_11602:HG4_PB_SVrefine2PBcRDovetail_9385:HG4_Ill_SVrefine2DISCOVARDovetail_12972:HG3_PB_SVrefine2PBcRDovetail_9129:HG2_PB_SVrefine2PBcRplusDovetail_6477:HG2_PB_SVrefine2PB10Xhap12_13637:HG2_PB_SVrefine2Falcon2Bionano_9200:HG2_Ill_SVrefine2DISCOVARplusDovetail_7591:HG2_10X_SVrefine210Xhap12_13042:HG2_PB_SVrefine2Falcon1plusDovetail_6981;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13042:HG2_Ill_SVrefine2DISCOVARplusDovetail_7591:HG2_PB_SVrefine2Falcon2Bionano_9200:HG2_PB_SVrefine2PB10Xhap12_13637:HG2_PB_SVrefine2PBcRplusDovetail_6477:HG3_PB_SVrefine2PBcRDovetail_9129:HG4_Ill_SVrefine2DISCOVARDovetail_12972;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0924287;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.283186;PBcalls=15;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=490;DistBack=1828;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=652;REFWIDENED=20:42324884-42325535;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3190.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:80:./.:0:0:0:0:./.:0:1:0:0:./.:0:0:0/1:3:10:.:.:.
chr20	54123229	HG3_PB_SVrefine2Falcon1Dovetail_11645	A	ACCTCAAAAACAAAACAAGAAAATCCCTGCTGCCTTGCTGGCAGGAATATTAAGAGACTAGGGAAAGAGGCAATCAGAGCTGTTAAAAAGTGAAATGGTGGAAATACCAGAAAGGAAAAAGCCCGAGAGAAGGAGCACAAAATTCTACCCATCAGCTCTCCCCAGATCACTGGCTGACTCCACAAACACGTGCGACCGTGTCCAGTCAGCCCATCTAAGGCCAGAAAAAAGTGAACTGAAATGCAAACTGCCACCCAAAGCAGGGGAGACTGAATTTTGTGATTTGAATTCAGCCAATTTAAATAAATATATAAATAAATTATCTTCAGTGGAGCAAAAAATGTAAAGTTTCTATAGCATACTTTTTACAATGTCAAGTATAAAGTCTTAATTATTTGATATTATGAAAAAAAAAATGACTTACCCTCAACAGAAAAGGCAATAAATGGAGACAAATCCTAAATTGATCCAATATTGGAATTAGCAGACAAAGATTTTTTAATAACTCTGAAAACTAAGCTGAAAATCTTAAATATTCTTGCAATAAAAATAATTAAATCTTAGCAGATAAAGAGACATTAAAAATAAAAATTCTAAAATTTTAAAATGTGACACCTGAAATAATAAATAAACTGTATGAGTTTAATGACATAAAGAAGGTAGCAGAGAAAAGAACCAGGAATGGTCGTGGTGGCTCAAGCCTATAATCCCAGCACTTGAGGAGGGCAGAGCATTTGAGGTCAGGAATTCAAGACCAGCTTGACGATGAACATGGTGAAACCCATCTCTACTAAAAATACAAAAATTAGCCAGGCATGATGGCGGGCACCTGTAATCCCAACTACTTGGGAGGCTGAGACAGGATAATTGCTTGAACTTGGGAGGCGGAGGTTGCAGTGAGCCAAGATTGTGCCACTACACTCCAGCCTCTGCTGAGTGAGGCTCCACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATGTGAAGATAAATCAATAGAATTATCCAATCTGAATAAGAGGAAAAAAGTAAAATAATAACAAATGATAAGAGACTCAAAGACCTGTGAGAGAATAGGAAGAGGTCTAATTTGTATATTGAGTTTTAGAAAATGAAGAAGAGAGACAATAAAAATAAAAGAAGCAAGGGGGAAGAAAAGAAATAAAAAGAGGTCAAATATTTCCTAAATTTGGTGAGATCAATCAATTTATAGACTCAAGAAACTCAACAAACACAAAGCAGGATTGATGCAAATAAAGCTATATATAGGCACATCATAGTTCAACTGATGAAAAAAAGGAGAACCTTGAAAGCAACCAGACAAAAGTGACATATTGCATACAGGGAAGCAATGATTTATCTATCCACACATTTGTTATCAGAAATAATGGAGGCCAGGAGACAGTGGAGCAACAGCTTTAACATTCTGACAGTGTGGGTTACGGAGTCAGACAACATGACTTAAATTGTATGGCTACTACTTAGTATCTGTGTAACCTTGGACAAGCTATTTGATAGTTCCATATCTCAATATATTACCTTTCTAACTAGTAATGTTAAAAGCTATCTCATTCTGCTGTTGAGGAGGTTAAATGAGTTACTAATACATGAAGGTTCTTAGTACTTGATGAATAATACAAGCAAATTCAATGCTTGCCATTATTATGATCAGATTTTAATATTTGTGGTCAATTTGAGTGCTTTAAATTTTCAGAAATAATTAGACATGCATAAAGACAAATACCTTTTTAAAAAGATCCAAAAAATAAGAGTAGTTAATTTAAATTACCCAAAACAATCAGGAGTTTGCTAAAGAAAGAATGATTTCCAAAGGGACTCTTATTCAATCTCATCCTTCTTTGTACCCTCTGCAGCAGAAGTTAAACTATTTCACAGCAAGAGGAAGCCAGTTCTCCCCCAGCCATAGTTGACTCCAACAAAATCTCTCACTTTCTCACCTCGGGCTTTTGCCTGCACTTATTCCCCAGTACAGGTAATTAGCAGTCAAATTCTTAATTACTCAATTAGTCCAACCCACAATGCTATCTGAATAAATCAATTAATGTAGCTCCCACAGAAGAGCCCATGTTTACAACATAACAGTTATAATATTGTCCCAGTTAATCAGCGCAGAACCATGCAGACTCTGATATTGACAATGATTGCCTCGGTCCACTGTGGAATTCATTTTGCACATGACAGAAACAGAAGTAGGACTCTAAATTTACAGCAATTTTCTCATTTTTTCTTCCTCAGACACCATATAAGGAGGTGAGAATTAAAATGCTGAGTGGCCGCAAGTCACTCAAATTTAGCTACTGATCAATTTTTAAAATTTATTGCTTGTTTTATTTAACCAATGTACCCTGATGCTTTGTGCCTGGTTCTTTGCTAGACCTAATAGAAGCCTCTTACTGCATAACTCTCTCAGCTTCAGTTTCCACAAAGTGCACCAGTGCTTCTCAAACTTTAGTGTATAAATGATTAACCCAGGGTTCTTGTTAAAGTGGAGTTTCTGACTCCATAGATCTGGCATAAGCGCAGAGACTCACTAATTCCCAGGAGATGCTAATGCTACCGTTGAAGGAAGCTGACTTGGAGCACCAAGGGTGTAGAATAAAGATTAGAGTGCTCACTTCACAGGATTGTTGAGGCGGTTGTGAGATCTGCGTGGAACAATGAAGATGACAAACTTAGCAAGCTCTAATTAGAGTGTGAAGTTCATTGTTAGAGACATGCCTTATAAGGACCAGAGTCTTACAAAAGAGAGAAAATACATAAGAGGATGAAGACTTACAGGAGAGGAAACATTGGGAACATCAGTAGGGTGGGGTTCTGAACTGGCTTTACTACTGATACACTAACATTTTGATGAATTCATCACTTAAAACCTTGGATACATGTTCTTTATGCATTAAAATAAGCCACTTTTGAGAGTTTTGTCATTTTCAGATGCTAAATTGCCTTTCATTATAGATTACTTTTAAATCAGATCAGTTTTGAAATGTACTCTTTTTCCAAGCAATAATTTTCAGAAACCACAGGCAATAATATTTTTTCTAGCAGATTAAAATACACACATAACTACCATAATTCAAACAATCCTTCCATATATTCCCTAAGGTATCATTTCATATATTATGAATTATATGCATTCTTTGAAAAACAATGCATTAGTTAATTTCTGTAATTTCTTGACAAATTAAGGAATAATTCAGTTATGTTTCCAGATTATCTGAATCTTAGAAAAATAGGGACTTCTGAGAAGAGGTATCCTGTAAGCTGACCCTTGAAAAACAAGTAGGCTTTACATTTAGACAATCTGAAACTGGACTTCTGTGTGTTGGGGTGGGGAGGAGAACGTTGCTGTTCAAGGAAAGAAAGAAGAAAGGGCATTCAGGATACAGGGAGTATCAAGAATGTGAGCAGAGGTGAGAACTGGTGACTGATTTCTAACCTGTCCAAGAGAAAAAGCATGGGTGGTGTTCTAGGACTTGAGGGATAGTATGAACTGAAACTCCAAGGTTGGAGAGAAACGCTTACACTTGAGTCCAGAGAGAATTTTGGATTTGTCCAGTTCTCTTAATATTCTGACAAACTCTCTGGACTCCTGCAAGAAAAATGCACACAGCACACACAGAGAGTGCATGCACATGCACACATACGTTTATAATATTTTGACCACAGTATCAGGGTGTGTATTTCTCCCTAGGGCCAATAAGTGAAAAATCTAGAGATCTATAGATCAAACATCTGATAGTGACAGCTTTTGGAAAATTGCAACTTTAAAGATTTAAAATTCTGCCCAGTGTCTCAGCATCACGGGGCCTCTTCTGAGTCACACAGCTCCTTTACGATGTTGGGACAGTGACAGAAAATACAACCCAAACTGGCTTAGGCAAGAGAAAACATAAAACTAATGGGCAGAAAGAGGTTTAGTTTCAGACAAAACTCCAAATCCCGTCACAGGAATCAGCCTGTCGTGGGGCTGTGCTGCCCTGCTCCACATTACCCTCAAATCCAAGTTCCACTTGAGGACAAGATGGTACCCATATATTCCAAACCTGGATTCTCTCAGATTCAAATCGCTCCAAGGAAATCATGCTAAATTTTAATATCCATCCATCCTCTACCAGATTCATATAGTTTCTATGAAGCTGATTCTACTCCTGGTCTCAAATGTGCCATGTCCCTTGGGCCTGGACAGTCTGAAACTAATTTCAGTGGTGATACAAATTGGTTTAGAGATGAGTGTGTGACTGTGTCAAGATTGCTGAGATGCCCTAAGAATTTCCCGAGGCTTCCAAGACAGAGCAGATACTCTTGACCTCTGGATCAGGACATGAGGGGATGTAAAGGATGGAGCTGCTGCAGTTGCTTTGCAACCTTGACAAAGGGATCTAACTGAGATGGGAATCAGCAGGTGGAAATGACAGTGAGAGAAACAGAAACAGTGAGTGCAAGCAAGAGAGAAGGTGTTACTGACATATGCTGAACCACTGATCCAGCTGTGCTGGAAACTTAGTAGCTCTGGTCTTTTTAGTTCTATGACCTACTTAACCTCTCTTGGATCTGTCAAAAAGATTCTTGTTAAAAAGTGTTTTAGGATAGATGACTTCCAAAGCCCCCTCAAGCTCCATACTTTCTGTAACACATGTGACAAACTATTTACGTGAAGTTCGTAGGTGTCCCAAGGATTAGGTTCCTGTTTCATAGCTAATACCATGGTTCCCCAAGTCCACATAATTTAATATATCAGAAAGTAACTGAGACCATTAAGAGACTCATCTGTTTTGTTCATCTAATTGCTGATTCTGTTTTGCTTTGAAGACTAAAAATACCTCAAATACTTCCCACCTTTTACAATCTTTATTCAATGCTCATTGAAGAGTGATTTCTATTGCTTTTGTTTCTTGTTTATTATTTATTGAACACACAATTAACTCACAATGCTTTTACAGACATACCTCAGATGCATGGTGGGTTTGATTGCAGACCCCTGCAATAAGACAAATATCAAAAGGAGTCAATTTTTTCTGTTTCCTAGTACATATAAAGATTACATCTACATTGTACTGTAGTCGATTAAGTTTCAATAGACTACCATTTATGTACGTTATGTCTAGAAAAACAAGGTATATAATTTAAAAATATTTTTTTGCTTAAAAATGCTGATGACCATCTGAGCCTCTAGCAACTCATCTTTTTGCTGGCGGAGGGTCTTGCCTCAATGCTGATGGCTGCTGATGGATCAAAGTGGTGGTTGCTGAAGTTTAGGGTGGCTGTGGCAATTTCTTAAAATAACATCAATGAGGTTTACCACACAAATTGACTCTTCATTTCAGAAAATATTTCTCTGCACTATGTAATGCCATTTGGTAACATTTTACCCACAGTAGAACTTCTTTCAAAACTAGAGTCAACCCTCACAAAGCCTGCCACTGCTTTATCAGCTTTTATGTAATATTCTAAATCCTTTGTTGTCATTTCAACAATGTTCATAATATCTTCACTAGAAGTAGATGCCTTCTCAAGAAACCATTTTCTTGGCTCATTCATAAAAATCAACTCCTCATCCAATAAATTTTTAATTTAATGGATGTTTTTTAATTCTAGTATTTTTTTGATCCTTCCAACACATCTTCAGTTGTTTCCTCCACTGAAGTATTGAGCCCCTCAGTCATTTATGAGGGCTGGAGTCAACTTCTTCCAAATTTCTGTTAATGATATTTTGACCACCTCTTATGAATCATAAATGTTCTTCATGGCAGCTAGAATGGTAAATCCTTTCCAAAAGGTTTTCAATTTATTTTGCCCAGATCCATCAGAGGAATCACTGTCTGTGGAAGCTATAGCCTTATAAAATGTATGTCTTAAATAATAAGACTTAAAGTTGAAATTACTCCTTGATCCATGGGCTACAAAATGGATGTTGTCTTAGCTGCCATGAAAACAACATTAATCTCCTTATACATCTCCATCAGGGCCTTTGAATAAAAAGGTACTTCATCAATGATCAGCAACATTGTGAAAAGCATCTTTTATTCTGAGCAAAAATAGGACTCCTGATTATAGGCCAGATGGCCGACTAGACACAGGAGGAACATCAGCCAAAGAGGGACCAAGACGCCAGGAAGAATGGCACACTCTCAGCAGATCTTTGCGGGGAAGGCACTGAGAGTGAACAGAGGGAGGACAGACACTAGGCTGAAGAGGGAGGAAGCTGGGCACCCTGCATAGGGATACTGTGCACCAGGACTCATTCCTCGTTCCCAGAGACTCCTGAGGAAGGAGTGAGTTGAACAGGCAAGGAGTGACCCACTCTTGCCATGGAACTCTGGAATCCTGGCAGCAAGAGACCCCATGACCTCAGTGGACACGAACTGGCAGGAAGAGCTGCTTAGAGAGGTGCTAGAGGAGGGACTGCAGCCTGTACAGAGCCCAGCAGGTTTGGTGCAGGAATATCTGCAGGTGAGAATTAAAAAACAATCAGGTACTATGCCTATTACCTGGGTGAGGAAATAATCTGCACACCAAACCCCGTGACTTGCAATTTACCTATATGACAAATAGGCACGTGGACCCCTGAATCTGAAATACAAATTAAGAAAAAAAAGTCAATAGTGGTTTTAAACCATGTTCAGTAAGCCACACTGTAATAAACACATATGCTGTCACCCAGGCTTTATTGTTCCATGTATAGAGCACAAACAGTAGATTTGGCATCATTCTTCAGGGACCTAGGATTTTTGCAATGGTACCTAAGCACTGGCTTCAACTTAAAGTCACCAGCTGCATCAGCCCCTAAGAAGAGCCTATCTTTTGAGGTTTTGAAGCCAGGCATTGACTTCTCTTCAACTATGTAAGTTCTAGGCAGCATCTTCTTCTGATATAAAGTTGTTTCATCTACATTGAAAATCTGTTGTTTTACTGTGGCTCTTTCATCAATGATCTTAGCTAAAATTTTTGGATAAATTGCTGAAACTTCTGTGTCAGTACTTGATGCTTTGCCTTGCACTTTTATATTATACAGACAGCTTCTTTCCTCAAACCTCATGAACCAACTTCTGCTAGCTTCGAACTTTTCTTCTGCAGCTTCCTCACCTCTCTCAGCCTTCATAGAATTGAAGAGAGCTCAGACTTCATTCTAGATTAGTCTTTGGCTTAAGAAAATCTTATGGCTGGTTTGATCCTCTATCCAAACCATAAAATGATCTCCATATCTGCAATAATACTGTTTTTCTCTTATTTATCATGTGTTCGCTGGAGTAGTATGCTTAATTTCCTTCAAGAACTTTTCCTTTGCACTCAAAACTTTGCTAACTGGCAAACAAGGCCTAGTTTTTGACTTATCTTGGCTTTCAACATGACTCCCCCACTAAGCTTAATCATTTTTAGCTTTTGATTTAAGTGAGAGATATGCAACTCTTCCTTTCACTTGAACATGCAGAGGCCATTGCAGGATGATTAATTGTCCTGATGTCAGGATTGCTGAGACTCAGGGACTAGGGAAGCCCAAGGAAAGATAAAGAGGGAGCGAAGCCAATCAGTGGAGCCGTCAGAACACACACACAACATTTATCGATTAGGTCTGCTGTCTTCTGTGAACATGGTTTGTGGCAGCCAAAACAAAATAGTATTATCAAAGATCACTGATCATAGTTCTCATAACAAATACAGTAATAAAAATAAAGCTTGACATATTGTAAGAATTACCAAAATGTGACACAAAGGGAACATATGCTGTCAGAATGTTGGAATGGCCCTAACAGACTTTCTCAATGCAGAGTTTCTACAAACATACAATTTGTTTTTTTTTAAAAAAAAAAAAAAAAAACTGCAAAATGCAATAAAGTGTGAAGCACACTAAAACAAGCTTTGCCTGTATAATGATTTGGGAGTAAGTTGAAAAGCATCCAAGTTCATAGACCCTGAAACCACAAAGTGAAATAGGAATCAATTAGTGACTCAGGCAATGCATTACCTGGGGAAGAGTGAAGCCAGGTGAGGCCTCGGGAGTTCCAAAATTAGTTTGTGGTCTGGAATCCACAGGAAGTTCCTTATGCATTAGGTTCGCAGTGGGATTTGGCCTAATTTCTTTGACAAGTGAGTAATTTCCAGGTAAATAAAGCAGGGTGAACACTACTTAGACCTTTTTGTCAGCCCACCTTTCACTCACATCAACAGCTGTCCAGTAAATAATGACCTCTTTTCATCTGACCTATGGAGCTTAGCAATTTTTCTCCATCAATTTTAAGTGTCTTAATCTCATCACATTGGTTTACTGTAGAAGAAATTTTTTTTTTTTTACTTATTTTTATTTTTACCTTCCTTGATTTTAGTCATTTAAAAACTGAGGATGTATACCATATGCCTTTTGGCTGAGCCTGTTTTATTAGGCGTGATGTATTTCAAGGGTGATAAATCTTTTATTTGGTCTGGCCTCAGATCACTGTGTTTCTTATCGCTATAGTTAAAGGGAGGTGGTATTCAGAAGCAGAAAGCTAGCTAGACTTCAATCAAGAGGCTCAGGAAGCAGACTCCCACCTTTTCTATCAGCTAATGATACCTTTTCTTGAGTCCAATAGTCAGCATAACTACCTCAGGGGAATAGTGAAAGAAACCTGAATATGCTACAGTGCACTGCAGTCCTTTAAACCTCCCGATGGGAGTACAAACTTCCAGTAATCACATACCTGGAGAAAACATGAGAGTTGTAGGAGAGAGAGAGATCCAATCCAGCACCTCCTGTACTTCCTTCCACCATTTCTAATAAAACACTGGCTGGGAAGCAGAATGGTTACAAATTGTTCATTCTGGGAATCTTGTATAATAACATACTTCATATACTTTAAGTGAACTTTGCAACTAATTTCAGGGATTTTTTTTTTTTTACTTGCTACAGTCCATAGATAAATTCTCATTTGATTTTATACAAAGCCTAGAAGGCACCAATCAAATCAAATACCAACCAAAGTTAAAATTATGTGGACATGAAAGCATTTGGAGTGGAGCATTCTCTGCCCCCTTGCTTTGCATTCTCTTAATCATGTTGCCTTCCAGGGAGGGATGTCAGGGAAGATTGCTTCTTCCATAATGCATGGTGTCTTTTTTCTTATCAATGCCATTCAATATCGCTTTCTTCGGGAAGTTCCCTGATTCACCATCCTCACAGAGGTGAGCAGCTTCGTTTATTTTGATCCTGGGGACATAGGCTGTGAAAGGAAACAATTTACCAAGAAGAAAGAATGTTGAGGGCTACACACAGATTTATTGGTGTAAAAAAACAAAGCAAGTCCAGATGTGACTCATTTTTGAGGCATGTTGTAAATACACCTGACCTGTTTCATTTATAACAAAGGAAGATGCCCTGGCTTACAGCTGAGTTCTTTGTGTGTTACTCAACTTTTCTCTTTTTTTCAGGGAGAACTAAAACTAGAGTTTAGGGAGTGATTGATGGGGATTTGAGGATTGTAGTTTTTTTCAGTGCTCCTGTTGGCTTTCTAAATTACTGCCTCTTCACAAGCCTAATCATTTATCACCCTCGCCTCCTACGGTGTTTTACATTTTGGCAACTATTTCCTGCCTTTGCCATTGTAAGGCTAATATTTAAAAATAAGGGGTTGGTGATTTTTATAATTCCACTTAGTGATATTAATGAAAATGTTGAAAGCAGCACATCAAAACAAAAACCAACTGCTTCTAGTTTCTGCTACACTGAAGAATTGTACTGACCACCTGGGATTCCCAAGGGCTTCTAAAACTCATATTTATATGTGTGTATATATACGGTGTGCACGTGTGTGGTTCTCTGCCACTCAAAATGTAGTCTGTGGGCCAGTAGCATTGGCCTCACCTGGATCTTGTCAGGAATGCAGCCTCAAGCCTACTCCAAAATGCAGAATCTGCCTGTTAAGCACTCGACATGATTTGTATGTGCAAAGAGCTTTAAAAGTAATGCCTGAGAGATTTTATTACATTTATTTAAATAATGAAATTAAAACCTTAAGAATGAAGAAAAGCTCATATATCACATACTAATGTTGACGCTGTGTGTTCAACTTCATCTTTTGTTCCCATTGTGATAGTATACAGAGAAAGATTTGCTAAATGCTACACAATGCATTTTGTCACTCTTTTTTGTTATACTGTCATGTTTTTTATATATAATTTCAACTTGTATTTTAGATTCATGGATTATATGTTCAGGTTTGTTACATGGATGGCATATCTCATGATGCTGAGGTTTAGGGTATGATTGATCCCATCACTCAGGTAGTGAACATAGTACCCCAATAGTTAAGTTTCTCAACCCTTGCTCCCTCTCTCCTGGCCCCCTCTAGTAGTCTCCAGTGACTATTGTTGCCATGATTATGCCCATGAATACCCAGTGTTTAGCTCCCTCTCATGAGTGAGAACACGCTGTATTTGGTTTTCTATTCCTGTATTAATTAACTTAGGATAATGGACTCCAGCTACATCCATGTTGCTGTAAAGAACATGATTTTTATAGCTGCATACTATTCCATGCTGTGCATATACCACATTTTCTTTATCCTATCCACTGTTGATGAGCACCTACGTTTTTTTCATGTCTTTGCTGTTGCGAGTAGTGTTGCAATGAACATGTGAGTGCATATGTCTTTTTTGTAGAATGATTTGTTTTCTTTTGGATATATAGCGAGTATTGGGATTGCTAGGTTGAAAGGTAATTCTAAGTTCTTCAGAGAAATTGCCAAGCGACTTCTTTTTTAAATAAATTTATTTTAATTTCTGGGATACACGTGCAGGACATGCAGATTTGTTACATAGGTAAACATGTGCGATGGTGGTTTGCTGCACCTATCAACCCATCACCTAGGTATTACACCCGACATGCATTAGCTATTTAACTTGATGTTCTCCCACCACTAGCCCCCAGATAGGCCACAGTGTGTTTTGTTCTCCTCCCTGTGTCCATGTATTCTCATTATTCAGCTCCCACTTATGAGTGAGAACATGTGGTGTTTGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCAGCTTCATCTATGTCCCTGTAAAAGGCATGATGTCATTTCTTTTTATGGTTGCAGAGTATTCCACTGTATATGTATCACATTTTCTTTATCCAGTCTACCATAGATGGGCATTTGAGTAGATTCTATGTCTTTGCTATTGTGAATATTGCTGCAATGAACATACACCTGCATGTATCTTTATAATAGAATGATTTATATTCCTTTGAGTATATACCCAACAATGGGATTGCTGGGTTAAATGATATTTCTGCTCCTAGTTCTTTGAAAGAATTGTCACACTGTCTTCCACAATGGTTGAACTAATTTACACTCCCACCAACAGTGTAAAAGCCTTCCTATTTCTCCACAGCCTCTCCAGCATCTGTTGTTTATTGACTTTTAATAATCACCATTCTGATTGGCTTGAGTGGTATCTCATTATGGTTTTGATTTGCATTTCTCTAATGATCAGTGATGTTGAGCTTTGTTTCATATGTTTTTTTGGCTGCATAAATATCATTTTGAGATGTCTGTTCATATCCTTTGCCCACTTTTTGATGGGTTTTTCTTTTTCTTGTAAATTTAAGTTCCTTGTAGATTCTGGATATTAGACCTCTATCAGATAGGTAGATTGCAAAATATTCTCCCATTCTGTAGGTTGCCTAGTCACTCTGATGATAGTTTCTTTTGTTGTAAAGAAGCTCTTTAGTTTGATTAGATCCCATTTGTCAATTTCGACTTTTGTTGTAATTGCTTTTGGCATTGTCCTCATGAAGTCTTGCCCTTGCCTATGCCCTGATTTGTATTGCTTAGATTTTCTTCAAGGGTTTTTATGGTTTTGGGTTTTACATTTAAGTCTTTAATCTATCTTAGTTAATTTTTGTGTAAGCTGTAAGGAAGGGGTCCAGTTTCAATTTTCAGCATATGGCTAGCCAGTTTTCCCAGCACCGTTTATTAAATAGGAAATCCTTTCCCCATTGCTTGTTTTTGTCAAGTTTTTCAAAGATCAGATGGTTGTAGATGTGGTCTTATTTCTGTGATCTCCATTCTGTTCCATTGGTCTATGTGTCTGCTTTATACCAGTATCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAATTTGAATTCAGGTAGTGTGATGCTTCCAAATTTGTTCTTTTTGCTTAGGATTATCTTAGCTATATAGGCTGTTTTGTGATCCATATATATTTTAATATAGTTGTTTTCTAATTCTGTGAAGAATGTCAACGGTAGTTTAATGGGAATAGCATTCAATCTATACATTACTTTGGGCAGTATGGTCATTTTCACAATATTCATTCTTCCTATCCATGAGCATGGAATGCTTTCCATTTGTTTGTGTCTTCTCTGATTTCCTTGAGCAGTGGTTTATATTTCTCCTTGAAGAGATCCTTCACTTCCCTCATTAGCTGTATTTCTAGGTATCTTATTCTCTTTGTAGCAATTGTGAATGCAAGTCCATTCATAATTTGGCTTTCTGCTTTTCTATTGTTGGCATATAGTAATGCTTGTGATTTTTGCATATTGATTTTGTGTCCTGAGACTGCAGAAGTTGCTTATCAGTTCAAGAATCTTTTGGGCTGGGACAACTGGGTTTTCTTGCTATAGAATCATATCACCTGCAAGCAGACAGTTCAACTTCATCTTTCTATTTGAATACCCATTATTTCTTTCTTTTGTCTGCTTGCCCTGGCTAGAGCTTCCAATACTATGTTGAACAGGAGTGATGAGAAAGGACATCCTTGTCTTGTGCCAGTTTTCAAAGAGAATGCCTCCAGCTTTTGCCCATTCAGTATGATATTGGCTGTGTGTTTGTTATAAATGGCTGTTATTATTTTGTGGTACGTTTCATCAATACCTAGTTTGAGGGGTTTTAGCATGAAGGGATGTTGACTTTTATGAAAGGCCTTTTCTGCATCTATTGAGATAATGTGTTTTTTTTTCTTCAGTTTTCTTTATGTGATGAATTATGTTTATTGATTTTGTATATGTTGAACCAGTCTTGTATCCCACAGATGAAGCCAGCTTGATCGTGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTATTTTGTTGAGGATTTTGGCATCGATGTTCATCAGGGATATTGGCCTGAAGTTTTCTTTCTTTGTTGTATCTCTGCCAGGTTTTGCTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGAAGTCCTTCCTTTTCAATTTTTTGGAATAGTTTTAGAAGAAATGGTACCAACTCCTCTTTGTACCTCTGGTAGAATTCAGCTGTAAATCCATCTGGTCCTGGCTTTTCTTAGTTGGTAAGCTATTTATTACTGCTTCAGTTTCAGAACTCATTCTTGGTCTATTCAGGGCTTCAACTTCTTCCTGGTTCAGCCTTGGGAGGGTGTGTATGTCCAGGAATTTATCCATTTCTTCTAGATTTTCTATTTATTTACATAGAGACTTTTATATTAGGTTGGCCCAAAAGTAATTGCGGTTTTTGCATAACTTTTAATGGCCAAACCATGATTAGTTTACACCAGCCTAGTAGTATACTCTGATGGTTGTTTGCATTTCTGTGGGGTCAGTGGTGATATCCCCTTTGTCATTTTTATTGTGTCTATTTGATTCTTTTCTCTTCTTTATTAGTCTAGCTAGCAGTTTATCTATTTAATTTTTTTCAAAAAACCAGCTTCTGGATTTGTTGGTTTCTTTAAAGGGTTTTTCATGTCTCTATCTTCAGTTTCACTCTAACCTTAGTTATTTCTTGTCTCCTGCTAGCTTTAGGTTTGTTCTTGGCTCTCTAGTTCTTTTAGTTGTGATGTTAGGGTGTCGATTTGACATTATTCTAGCTTTTTGATGTGAGCATTTAGTGCTATAATTTCTCTCTTAACATTTCTTTAGCTGCATCCCAGAGATTTTGGTATGTTGACTCTTTGTTATCATTAGTTTCAAAGAACTTCTTGATTGCTTTTTAACTTCATTATGTACTCAGGAGTCATTCAGGAGCAGGTTGTTCAATTTCCATGTAGTTTTGTGGTTTTGAATGAGTTTCTTAATCCTGAGTTCTGGTTTAAAGTCTGTTTTGTCAGAAACTAGGATTGCAACCCCTGATTTTTTTTTTTTTTCATTTTCATTTGCTTGGTAAATTTTTCTCCATTTCTTTATTTTGAGTTTATGTGTGTCTTTGCACATGAGGTGGTGTTTTGAATACAGCACACCGGTTGATCTTCACTCTTTATCCAGCTTGCTATTCTGTGTCTTTTATTGGGGCATTTAACCCATTTACTATTAAGTTCATATTGTTATGTATTAATTTAATCCTGTCATCATGGTGCTAGCTAGTTATTTTGCAGACTTGTTGATATAGTTGCTTGATAGCTCATTAGTCTTTGTACTTCAGTCTGTTTTTGCAGTGGCAGCTAACGCTTTGTCCTTTCCATATTTAGTGCTGCCCTCGGGAACTCTTGCAAGGCAGGCATGGTGTGATGAATTCCTCAGCAATTTCTTGTCTGAAAAAGATATTATTTCTCCTTTGCTTATGAAGCTTAGTTTGGCTGGATATAACATTATGGGTTGGAAATTCTATTCTTTAACAATGTTGAATATTGGCCTCCAATCTCTTCTGGCTCATAGGGTTTCTGCTGAAGTCTGCTGTTAGTCTGATGGATTTCCTTTTGCAGGTGGCCTGGCCCTTCTATCTGGCTACGCTTAATTTTTTTTCTTCATTTCAACCTTGGAGAATCTGATAATTATGTGTCTTGGGATGGATTTTCTCATGGAGTATTTTACTGGGGTTCGTTGGTTTTCCTGAATTTGAATGTTGGCCTTTCTTGTTACATTGGGGAAGTCTTTCTTGTTGATATCCTGAAGCATGTGTTCTAACTTGTTCCATTCTCCCTATCTCTTTCAGGTACCCCAATCATTCATAGGTTTGGTCTTTTTACTAATCCCATAGTTCTCAGATTTTGTTTTTTCTTTCATTCTTTTTTCTCTAATCTTTCTGCCTGTCTTATTTTACCAGATAGTCTTCAAGCTCTGAAATTCTTTCATCTGCTTGGTCTATTGCAGTTATTGATACTTGTGTTGCATCGTGAAGTTCTTGGTTGTGTTTTTCAGCTCTGTCAGGTCATTTATGTTTCTCTCTAAACTAGTTATTTGGTTAACAGATCCTGTTAATGTTTTATTCATGGTTTTTAGCTTCTTTGCATTGGGTTAAAACATGTTCCTTTAGCTCAGCAAAGTCTGTTATTACCCACCTTCTGAAGCCTACTTTTGTCAAGTCATCCATATCAGCCCCCCCCAGTTATGTGTCCTTGCTGGAGAGGTGTTGTGATCATTTGGAGGAAAAGAAGCTCTCTGCCTTTTGAGTTTTCAGAATTTTTTTGTTGATTCTTTTCTCATTTTTGTGAGTTTTTCTACCTTTGATCTTTGAGGTTGCTGGCCTTTGGATGGGGTTTCTGTGGGGACATTTTGTTGATGATCTTGTTACTTTTCTGTAGGGCTGCCGCAGTTCGCTGTGGGTTCACTCCAGATCCTATTCACCTGGGTCCCTCCCACATCTGGAGGTGTCACCAGTGGAAACTGCAGAACAGCAAAGATGGCTGCCTGCTCCTTCCTCTGGGGTCTCTGTCCCAGAGGAGCACTGACTTGATTCCAGTGGGAATGCTCCTGTAAAAGGTATTTGGTGACCCCTGTTGGAGGCGTCTCACCCAGTCAGGAGGCACAGGATCCAGGCCCTGCTTAACAAATTACTCTGGCTGCCCCTTGGCTGGGGAGATGTACTCCGCTGGGGAGAATCCCACTGGTCCAGACTGCCTGGATTCCTTAGAGCCAGCAGGGGAAAGACTAAGACTGCTGACATGTGGAGAACATGGCTGCCCCTCCCCCAGGAGCTCAGTCCCAGGGAGATCAGAATTCTGTCCCTAAACCCCTGGCTGGAGTTGCTGAAATTCCTGCAGGGAGGCCCTGCCCAGTGAGGAAGGATGGGTCAGAGTCTGGCCCAAAGAGGCAGTCTGGCCACAGTCTGCCACAGTTGCTATGCTGCTGTTGGGAATTCCTCCTAGGTCCTAACTATCCAGTCTCCCCAGCACTGGCAGGGGTCAAACAGCAGACTGGAGCCTCAGTGATGGTGGCTGCCCCTCCCTCAGGAAGCTCAGTTGTCTTAGGCAGCAGACAGCCACAGTGATTATGGCCACCCCTGCCCCTGGAAACTTGGTAGTCTTAGGCAGTCTCCAGCCAAGTGGCTGCTGGGAGTCTGCACAGCTCCCTGCTTGGTACCCAAGGCCCTGGTGGCATGGGCTCACAAGGGATAAAGGGCCAAGATGGCTGACTAGAAACAGCTGCAGTTGGAGGCTCCCACCAGAAGGAAAATGGTAAGTGAATCCTGCACCAGCAACTGAAGCATCCAGGTTCTCTCACTGGGACTGACTAGGTGGTCCCCACAACCCATGGAGAACAAGGAAAAAGCACAGTGGTGTGACCGCCTACCTGGGAGCCACATGGGGAAAGAGGAGCTCCCATCCCCAGCCAAGGAGGCGGTGAGTGACGGTGCTACCCAGCCTGGGAAACCATGCTTTTTACATGGATCTGTACAACCCACAGATCAAACTGCTTTCTATAGTGGTTAAACTAATTTACATTCCCACTAACAGCATATAAGCAATCCCTTTTCACCACAGCCTCTCCAGCATTTGTGGTTTTTTGATTTATTAAGAAAATCAATTCTGGCTGGTATAAGATGATACCTCATTGTGGTTTTGATTTGCATTTCTCTGATGACTGGTGATATGGAGCATTTTTTTCACATGCTTATTGGACATGTGTATTTTTTTTGAGAATATATTTTTGCCACTTTTTAATGGAGTTATTTGTCTTTTGCTTTTTGAATTATGTTCCTTACAGATTCTAAATATTAGATCGTTGTCAGTTTCATAGTTCATGAGTATTTCCTCCAATTCTATAGGTTATCTGTTTACTCTGTTGAGAGTTTCTTTTGCTGTGCAGAAGCTGTTTATTTCACTAGGTGTTACTTGTCAATTTTTCTTTTTGTTGAAATTGCTTTTGAGGACTTAGCCATAAATTCTTTCCCCAAGCCTAATATCCAGAATGGTGTATCTTAAATTTTCTTTTAGGACTTTTATAGTTTGAGGTCATCTATTTAAATCTTTAACCTATTTTGAGTTAACTTTTATTCATGGTTAAATGTAACGGTCCACTTTTATTCTTCTGTGTATGGCTATCCAGCTATCCTAGCACCATTCATTGAATAGAGAGTCATTTTCCCATTGCTTACTTTTGTCAACTTTGTTGAAGATCAGATTGCTGTAGGTGTGCCGCTTTATTTCTGGGTTCTCTATTCTGTTCCATTTGTCTATGTGTCTGTTTTTGTACCAGTACCATGCTGTTTTGGTTATTATAGCCTTATAGCATAATTCAGAGTAAGGTAACCTGATGGCTTCAGCTTTGTTTTCTTTTTTTATTGCTGTTGTTTTATTTTTTTTGTTTTGTTTTTGCTTAGGATTCCCTGGGCTACTCAGACTCTTTTTCATTTCATAAGAATTTTAGAATAGTTTTTCTAATTCTGTGAAAAATGGCATTGGTAGTTTGATAGAAATGGCTTGGAATCTATACATTGCTTTGGGCAGTATGGTCATTTCAACAATATTAATTCTTTGAATTTGTGAGCATGAGGATGTTTTTCCATTAGCTTGTGTCACCAATGATTCAGCAGTGTTTTGTAGTTATCCTTGTAAAGATCTTTCACCTCTTCAGTTAGATGTGTTCTTAGGTATTTCATTCATTTTGTGGCTATTGTAAATGGGATTGTGTTCTTGATTTCTACTCTGTTTGAACTTTATTGGAGTATAGAAGTCTTACTGATTTTTGTGCATTGATTTTGTGTTCTGAGACTTGACTGAAGTGTGTTTATCAGTTCCAGAGCCTATGGAGGTGTCTTTAGGGTTTTCTAGGCATAGAATTATATCATCTGTGAAGATAGTTTGACATTTTTAATGTATTTAGATGTCTTTTATTTTTTCTATTGCTTGAATGCTCTGGCTATGACTTCCAGTACTATATAGAAGAAGAGTGGTGAAAGTGGCATCCTTGTTTTGTTCCAGTTCTCAAAGGAAATGCTTCTAGCTTTTACACATTCAGTAAGATGTTGGACATAGATAACACTTGTTATTTTGAGGTATTTCTTTCACACCTAGTTTGTTGGAGGTTTTTTTTTTAATCATGAAAGAGTATTGCATTTTATTGAAAGCTTTGTCAAGGTCTTTTGAGAGGATCATAGAAATTCTATGTTTGGTTAATAACCTTTATTGACTTGCAGATGTTAAACCAACCTTGCATCCCAGGAATGAAACCTACTTGACCATGTTGAATTAATTCTTTGATATACTGCTAGATTTGGTTTCCTAGTATTTTGTTGATAATTTTTGCATCTACACTCATCAGGGATATTGGCCTGTAGTTTCCTTTTCTCATTGTGTCTTTGCTAGGTTTTTGTATCATGGCAATACTGGCTTTGTAGAATGAGTTAGGGAAGAGTCCCTCCTGGATTGTTTTTTTTTTTTTTTTTATTTTATTTTCAGTAGAATTTGTACCAGCTCTTCTTTGTACATGTGATAGAATTTGGCTGTGAATCCATTTGGTCCAGGGCTTTTTTAGTTAGTAGATAATTTTTTTATTACTGATTCAATTTCAGAACTTATATTGGTCTGTTCAGGGTTTCAATTCCTTCCTGATTCAATGTTGGAAGAGTTTGTGTTTCCAGGAATGTATCCACTTTCTCTAGATTTTCTAGTTGTGTGCATAGAGGTATTCATAATAGTCTCTGAAGATATTTTGTATTTCAGTGGGATTGTTTGTAATGTAACCTTTGTCATTTCTGATTGTGCTTATTTGGATCTTCTCTCTTTTCTTCTTTGTGAATCTAGCTAGTAGTCTGTCAACCTCGTTCATCCTTTTGAAGAACCAACTTTTGTTTCACTGATCCTTTGTGTGGATTTTTTGGTCTCAATTTCATTCAGTTCAGCTCTGACTTTGTTTCTTTTCTTCTACTAGCTTTACAGTTTGTTCTTGTTTTCCTAGTTCCTCTACATGTGATGTATAATAATTAATTTGAGATCTTTCTTTTTGAGGTAGGCATTTAGCACTATAAACTTTGCCCCTAACACCACTTTTATTGTATTTCAGATATTTAAGTACTTTTGTCTCTGTTTTTATTGATTTCAAAGATCCTTCTTATTTTGGTCTTAATTTCATTGTTTACCCAGAAGTCATTCAGGAACAAATAGTTTAATTTTCATGTAATTGCCATCATTCTTTTTAAGCCATCAGTGGGGACATATCATAAAAAGCATGACATACTGCCTCCAATTAGCTGATGAAAGATGACATCTGTGCCAATGGGCCTGGACTGCAGATGACAGCTGTGCACTCTGGCCTTATTCCTTCATTTTCCTACATGAGCAGAGCACAATCTTGTAAACTCAGAGTGTGGACATGCTTCTAACTAGTAATATTTCCCTATCTACCTACCATCATTAGTTACCATTTTTTTCTGAGTATAAACTGCTTAATTTCAATGCTTTCAATTTCTGAAAATCAGGCAAAAAAGTAAAATCTGAAAAATATGCATGTCTCCAAACCAAAGTGGTTTTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTTGGTTGGTCCGTTGGTTGGTTTTTTTGTGCGTGTTCAATTTTAACCAAGTCAGCATGCTTGATTATGGTCTTTCAAGGTATGCCTCTCAAAGAACAATAAAAGCTGCATCACTCTAAAAATGGAAAACAGTTTGTAACTCTGAGGTGCCATAAATTCCCCAAAAATAGGTTACCATTTAAGTTGGCATCAAATTTACCTGAGGCAACAGCATTTTCATTAAATAGCTATGAAGAGATTTAAAAAAAGAACAAAACTAGCACTACCACCAAAAAATGGTAATTATCAAACAGGAATCCGTTGCCAAACTCTGAGAGAAAGCTAACCACAGTGACATTTATGTACGTGTAACAGGACTGGTAGGTGATATGATTTGGCTGTGTCCACACCCAAATCCCATCTTGAATTGTAGTTCCCATAATCCCAATGTGCTGTGGAGGGGACCCAGTGGGAATAATTGAATCATGGGAGTAGTTACCCCCATGCTGCTGTTCTCGTGATAATGAATGAGTTCTCATGAGATCTGATGGTTTTATAAGGGGCTTCCTCCTTTGCTCAGCTCTTATTCTCTCTCTTGCTGCCATGTGAAGAAAAATATGTTTGCTCCCCCTTCTGCCATGATTTTAAGTTTTCTAAGGCCTCTCCAGCCATGCGGAACTGAGAGTCAATTAAACCTCTTTCCTTTATAAATTATCCAGTGGTGGGCATGTCTATTAGCAGTGTGGAGAAGGGAGTAATACACCTGGGTACTAGACCGTCTTTTCCTTGCATTTAAGTTCTGGGACCTGGGTTCAGTTGCAGAAAAGCAGAATTTGAGGCAATTGTATAGCCCTCTCCCTTTCTATGTGTGTTTAGAGATGGTGGCTCACAAGAGACAACAGAGCAGAGAATGCCAGCATATTGTCTGTGTGCTGGGGTGGAGTCTGTCAGAAGTGCTGGTGCCCTGTATTAATAACAGGAAGCTTTTTAGACACAGTGTGCTGGATATAATAGCTTTTTTTTCTTTAAGAAATTTTTTCATTCTGATAATCAGATTTAAGCACTGTGAGGAGAGGAAGATTTCATATTTAAGGATAATCATGTTTTTCCATTCCCCTATTTGTAAGGGATTCCTGATCTCTTACTTGTCCCTTTCCTCTTCCTCATGGAAGAAAGGTCGATAATATAGTTGATGTGTGGAAATCAGGAGCCTCTGGTTCTTTCGGTTGGAGCTCATCTAACAAGACCTTGAGTGTAGGGATGCAATCTTATCCTCCTTCCTCTTCACTCAGAAAGCTAGAAGCTGAAAGAAGACAAGATGGCGTGCTCTATCGATTCAAGTTTCAACTTGAGAATGGAGCATAACAAACTCATTTTAGATTTCACGAAAAGCTACATCATCCAGCCAGGATGTTTTCAATAAAAAAAAAAGTTGGGTTTGGTTCTCCACCTGCTGACTCTTGTCTGATTTATCAGTTGGTTCAGAACTTGAACAGGAAGGAGAGGTGGTTCTTTTGTGTTTCAGAGTACAAGACACAGTAAAGAAGAATGAACGCTAAAAATGCATGCAGTGGGTTAAAGGGTATGTACGTTAATGAATCTCAAACTGTATATTTGAAAAAGAACCCTCACCAAAGATCTATCACTGAGAGAAAGAATATTTTCTAAACTTCAGAGAGAATATCTTATTTATATATTTTTTAAATGAGGTTATACAGTTACCTTTATGCATATGCATATTAAAGAATAGTAATTTGTTAGATCCAAACATTTTAAATATACCACAACATTTATAATACTGTATAGTGATATTTTTTGTTATTTTAAAATATACAAGATGCCTGAAAAATGGAAATGGTCTGGGTCTCTCCTGACCTCTAAAAGCTCTTAATGGGGCTATTCTGAAGTGGCTGAAGAGCTAGGTCAAAGACCAGCCCAGGCTCACTTCTGAGAGGTCTCTGTTCATTCAAATGTAAATAGAGAGGAAAACTGAGTGTTGCTAGGAAAAGGAATCTGCATGAACTCTAAAAAGGGAAAATGACCTGGAGATATATAAACCCTAGGTTTCCAGAAATTATTTGTGCACGAACCACCATAAATTCACATGAAAGTGTTTATTGTCCTCAATAAAATGCAAAAAGGCATTCTCTGAAACAGAAGCAGGAAGTCATAAGATCAAAGGGTTGTTGAGAAGTTCATTTATATTAGAAGGGTTGGGCAAGATTAAGAATGATTGGAGGAAATTAAAAGTGGAGAGTCATAACTGTGATACACATTGGAGACAATGAGGAACAAAATCCCTTCTATAGGTAAAATACATCTTTGTTGCAGAGGACAGATGTAAAACGTTTTCTAAGAATTTAGACAAAGGAAAGGCTAACATGAAATAAAGACATAGCATGAAGACGAAGGAGATCTGTGATCAGGGTTCCAAATGAAGGGACCAGAACAGAACTAACAAAAAGCACAGAAGACTATTTCATCTACCTATAATGACAGCAACAACCATAACCTTCCTGAGTTTAGCAAAATATAAAAAGGAAAACTTGAGAGACTGTACTGCGTGCTCAACAAAATCAGAAAAGAGAGCTACAAGAATGTACACGTGGTGATAATTTTTAAATTCTATGAGAGAGGTAAAAATATCCTTCAAGAATATTTGAAGGAAATGAGGAAAAGAAAAGGTTACTTAATAAAGCAAAACAGACTGGCTTCAGAATTATTACTACAACACTTAAAGTCACACAAGAAGAAGCCAGTAAGGACTCAGGTAATACAGTGTTTTAGTAAAAAGAAAAATGATAGGTGAATATACAACTCACTTAATGAATAAGAAAGCAAAATTAAGAACTTGAGATCAGAAGGATTATGGCATAAAAATATGATAGGCAAAGACTGAAATCAGTCAAGCATAGCATTGAGGCCACATAATTTTATAACCTAGACACAAGAGTGGAGGCATGTATTAAAAATCACTTTTGAATGAGAAAGTTTAGGATGGCGAAAACTAAATGATAACCTATGCTAAAGAAGGTATGCAACAGAAGAAAATAAACTCCCTGAATAAAAGAGTTAGTCTAAATGTAGGATATCACAGTATTATTACTAATGATGAAATAAAGGTGGAAATGCAGTTGTGAGTACTTATAAGTGTAAGTAAATGTTTATGATGCTATTAATAGAATTTAATAAGTCTTGTAAATAACATAAAAACCTCAGACATGAAATTGAAGGAATGGCAATAGTAAGAAAATGTAAAACGAGATGACAAAGTCAGACTAAATGTACACATTATAATAAAAGTAATAAATTTATTATAAAATGTATACACTACAGGATGTTTATAAGAAACACAAAATGATTCCAAAAGGTTCTAGGTAAAATGATAGGCAAAGAATTGCCAGTTTATTGTACAAGTAAAGAAAGCAGAAGTTTCAGTATTATTGTGGATGAAGTAGAATTCAAGCAGAAACACAATAAATGGTGAACAAAATCATGTGCTTATTGGCAATGGATAATACTCTTAATGCGAATGCGCAAATATAAAATATTAAACACAAATATTAACTTTATTTTTGACAAAGGAGAAATTAGATATGGCTCCCAAACTCAAAAATAGCTGGGGGCAGGGAGTGGGCAAGGAACTGTTAAAACAAAAGATTGTAATGCAAAATGCCTAATGTACCTCCGCATTAATTCAACAAAAACTTGAGATTCTTTCTCTGTGACATAACTCAAGCTTTGAGAATGCAGTGGCGAATAAGCAGATGTGCTTCCCAACTTCACCATGTTTGCAGTCTATTTTGAATAAAAGGAATAATACAAAGAAGAGAACAATGAACAGCCATGGAAACAAAGTGAAGGAAGGTTTTGGTGATGAAAATCTGCAGATGTTTCACTCATTTCACATCAGGTTGGTAGAAGCTGCTTTGTCAAGTGTATCCTGCTATGTTAGGTACATGAAGAAAATATACAAAAAGGCACACCAAATTAGCATCAACTACTGCAAAAATAAATAAATAAAAATTCTCACAAGAAAATTAACTTTTTCTTTTTTTAAAGAACATGGTCCAAGAATTGCTTCTTTCCAGACCATGGGCCCACACATTTTTACAAGCTTTGCTGATACATCTCCCCCAGCCAGGTTAACAGAAAGAGCAAAATTGTTCCCAGAGAAGGTATTAAAAGCATGGCCATGATCCTGTGCATCATTTGCTGCCAACAGACACAAAAGGGATGGCTTGTGTATTCTCCAGGCTCATCAACTGCAGACCTACCAGTGGCTCATTTGGTCCCTTCCTTTGTGCCTGGCACCCTATCCCCACTTATTGAAAATATTTAATAGAACAGAACCTTCTTTTCTTGCATTTAGCCGAAATAAAATTAGTTCACAGTAACAGATTGTTACCTTGACTAACTGGACATACTAACAGACTGAGATGTGTGGCAATACATTTCCTCTTATGACATTTTTGTCTGGCAGCATAAGATGACTACAAATGGCATCTTTACTGACACACAGACCAGTTCTATGTTTCGCAAGTGTTGATTTTACTCCTGATTTTCTCTGCAGTCTTCTAGAGGTTGAGCATGACTCTTTCGTTCATTTCCCTTTGGATTTTCCATATTTAATCATTTTCAAGTAATAATTTAGCTTGATAACATGAACTTGGATTTAGGAGAAATCCCTTTAAGACTTCACCACCAGAAACAATATGGGGTGTGTACCTCATGCATTCAGTAGCAATGTATTGTATATCTGTTTTGTGATATCACTGATGGTCAAGAGACATTGAATTGTGTATTGCTCTCTTCTTCCCAGCTGTGAAACGTTCTAGTTTCTGAGTCTGGATTTTATTTTATTTTATTTAAAAAACGAATTTTGAAACGAGGTCTCTTTGTTCCATTACAATAATTTTCAGTACTCTCTTCATCTCTTATTAAGTCATTCTGTGCCTTCTCTCAGAGCACATTGTGACTGAAGCATTAATTAGCCTTCAGAGATCCTCAGACATGCTTCTTTCAGCAAAGATCTGACATTTGGGGACTGTCAGTCACTTGGAGTTATACCGAATAAAAAATTCATATTAAACATTTCAACAAGGAGTTCATATACAATGGCAGAGGGAGATGGAAGATTGATAGAGTAGAAGGGAGTCTGTTTAAACTTTATATATTAGACAACATGGGGTAAATGACGTTTGGAATTAATGAAGCATATAATCATAATTACATGGCTGGTTCATCATCCTACCTTCCAAACTGTGCCTGAAATCAGCTAATGGCGTAATACATGTACAGTTTCTTGTCCAGAGCCTATCTATCATGGCATGAGTATTCAATAGCTTAGCCAACATTGTCAATAAGAAGCTGTTTCTCTAGCACAAAAATGTATTAGGCGCTAACCAATGAGATAGCTGCAGCAGGCTTAACAAAAAAGCTTACATTTTCTGTTCTTGCCTTTTCTCTTTGACCAGATTTCACAGATTTGAGAAGGTGGGATGACATGGAGGAAAGCTGATGTTATGAAAGCAAGGAGTTCTTCCACAGGCTCCCCCTTGCTCAAATTAGCGTTGAAAAAATGGAAATGAAAGATGGAAACTGATGTTTATTAAATGGCTACTATATACCACGGGTGTCGCCTATACCAATAGATGCAGTATTTCATATAGAATAGATGATCAATAAATGTTGAAATCAATAAATAGATGTATGATTTATATGTATATGTATGTATATACATGTATATTATACGTTATACATCTGTATTATGTATGTATATACATGTATATTATACGTCATACATCTGTATTATGTATGTATATACATGTATATTATACGTCATACATCTGTATTATGTATGTATATACATGTATATTATACGTCATACATCTGTATTATGTATGTATATACATGTATATTATACGTCATACATCTGTATTATGTATGTATATACATGTATATTATACGTCATACATCTGTATTATGTATGTATATACATGTATATTATACGTCATACATCTGTATTATGTAAGTATATACATGTATATTATACGTCATACATCTGTATTATGTATGTATATACATGTATATTATACGTCATACATCTGTATTATGTATGTATATACATGTATATTGTACGTCATACATCTGTATTATGTATGTATATACATGTATATTATACGTCATACATCTGTATTATGCATGTATATACATGTATATTATACGTCATACATCTGTATTATGCATGTATATACATGTATATTATACGTCATACATCTGTATTATGCATGTATATACATGTATATTATACGTCATACATCTGTATTATGCATGTATATACATGTATATTATACGTCATACATCTGTATTATGCATGTATATACATGTATATTATACGTCATACATCTGTATTATGTATTACACATGTATATTATACGTTATACATGTGTATTATGTATTACACATGTATATTATACATTACACATGTGTATTACACATTATATATGCATATGTACATTATACATTATATGTACAGTGTGTTAAATATATGTGTTACATGTATAATATACATACATATATAATACATATATGTATGTGTTACATATGCATATGTATTATACATTATATGTAACACATACATACGTGTATTATATATCATACATGTAACACATGCATGTATTACATATACATATGTGCATATATATACATAAATATATGTGTCTGGAAGTATAAAGTGGTGGTAAAGACCATGGAGTTTTGTTTCATGGACTTGGGCCCACGCTCAGGCAGTACATCATTAAGCAAATGGAACTATAATGACTGCTGTCACAACTTTTCTTTTCCAGGTTATTACTGTTAATATATCCCTCACCATCCATAACTTTTTTTAATAATTCTCAGGGAAGATCTTGTCATCTCCCTGAAAAAGTCATGTCTGAGCATGAGCCCCCAGATTCAGATTGAGATCCTTATGGAATCTCTGTACATTTCAATATTTTTCCTAAATCCCTTATGAGGTTAGTGGTTTATTTTCCCAGCCTATGGAGGGAAGCTCTGGCAAGAATACTGCATAGGAACAGCCAGGATGACCTATGGGATGCCATCCAGGGCCCTCCTTCCATGATGGGAAGTCCAGCCACGCGCTGCTAACAGTGAAATGCAATGTGGCCCATTCTCTTTCACTATAAGGATAGACAGCTGTTCACTGACCATATCCATTTACACCACTCATTTACTGTGACATTTGCGGTTTGAATATCTGTTTGCCACATCCTAGCTCTGTTAACACTTTGTATATGATCTGACATAACAGAGAGCATAAACTAACCTTCCTCCCAGCTCTGTATTTGATCCAAAAAGCAAGTCCTGTTATTTCCTTTTTCCCATGATTAAAACAACAACAAAAAAAGAATATCGTGTATTGCTACTTAGAGTACTCACAGGAAACAATGGAATGCTCAATATGTTTAAAGAAAAATAGGCGTTCATGATAGTCTCCGGGATTAATGACAGTGGATGACTTGATATGAATGGGGGAAAGAAAAGGAAGAAGGTGGCCGGGAGCAGTGGCTCACGCATGTAATCCCAGGACTTTGGGAGGCTGAGGTGGGTGGATCATGAAGTCAGGAGATCAAGACCATCCTGGCTAACACAGTGAAGCCCCGTCTGTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGTGCTTGTAGTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATCTCTTGAACCCGGGAGGCGGAGGTTGCAGTAAGCCAAGATCGCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCAGTCTCAAAAAGAGAGAGAAAGGAAAGAAGGTTCTTGGAACCTGGGAAGAGCTGGAATGGTGGAAGAGGCAGTGCAAGGCAAGAAGTGTAGCCATATACAAATGCAGCTACTGCTCAAACCAAACAGGCAGGGAGAGAACAGTGGGGAATAAACACCCTGACCTTTCTTCTTTTTTCCTTGAATTTTGTTTGACGTCACCTATTGGTTGGTCACTACTGAGTATCAGAGGACAGGCTGGCTAGACCGATGCAGTAGAAGGTAGCTATGTGGACAGAGAGTGGCAGAGAAGGCATAGTGGAGCTGGGATAAGGGCAAGCATAGGAGAATCAGTACCATTTTGTCTTTTCCAGCCCTGGGTCTCCTCCAGCTGCCGCCCTCTCTCCCTTCAGCTTTACAAGCTTCAGAAAAGCTTGCTGCTATAGGGCTCGCCTCCTGTTGAACATTGACACTGGGAAATCCAGCATTTATTTCCGCCTCTGCTCTGAACCTTCTTTGACCAAGTCACACTGGCATCCTTATGGCTAAATCCTACATCCGTTCTTTAGTTCTCTTGTGGCAAAACCTCCTCCCACGTGGGCCGTCGTTCTCCTCTGCTCCCTTCTTTACTGTTTTGGCAGTCATTGTAAAGATCATGTTAATGACAAAACAAAACAAACCAACAACAGAATCCAAGAGCAAAATGATTGTTTACAATACCATCCTGTATTTAATTTCAGATTTATTATTACTTTCTGAAACAGGGTCTTGCTGTGTTGCCCAAGCTGGAGTGCAGTGGCACAATCTCAGCTGGCTACAACCTCTGCCTCCCAGGTTCAAGCAATTCTCATGCCTCAGTCTAGTGAGTAGTGGGGACTATAGGCACATGCCACCATGCTCAGCTATTTTTTCTTTTTTCTGTTGTATTTTTAGTAGATACGGGGTTTCCAACATGTTGGCCAGGCTGGTCTCGAACTCCTGACCACAAGTGATCTGCCTGCCTCGGCCTCCCAAAGTATGGGACTACAGGCATGAGGCACCACGTCTAGCCTAATTTCAGATTTGTATTTGTTCATTATTTCTAGTCTGTATGGCATTTCACTTAGCACACAGAGCATATTGCATCATTTTGCCAGTTTCTTTCTTGTATTCCCCTCCTTCCCTTTCCTACCTCATCCGACTTAAACCATGTGAAGAACCTCACATGTGTGTTCTTCATATCTTTCTCCATGACCCATACAAGCATATGCAAAACTATGTATACACATGTAAGGTGACTTTAATGTGCTGGTTTTGTTTTAATGGCGCACACACACATAAAATAACACCATATATGTTTCTCTACAACTCCACTCTCAATATAATGTAAATTATCCTAGGATGATTTGCCTGGAATTTATTTTGTTTTTATACTTTACCTCGTGGCTTTCCAGACGAGCATCAGGCTTGGCACAGCTTATCCATCTGGCTAGGTAGGTGTCTGTTCTTTATTCAATTCAAGATGAACTCTCCTTTAGTCAAAAACAAGAAATCTCTAAAGGAGCCACCAAGCTCCTTCTTGAAATATTCTGTGCCCATAGTTTCTGATATCCCTCTGTCCTGGTTTTCTTCCTCAAATTCTCTCCCCACCTGTGTGTGTGAAATCCTCCTTCTCTGTTTCCTTTCTTCATGCTTACCTTTGACTCAACTTTTTCTGTGATAACAATGCTTAATAAACAACCCTATAATTTTATTGGCTTAAAATCACAAACATTAATCTGAAAAGGCTGATTTTACATTTCTAGTGAATTTCTGATAAGTAATTTCCCCTGGAGTAATGTCTTACGTACGTTTTTGTGTGCCAGCTTATTTCCTACAAATCCTTTTTTCATATTTTAATTTTCCTGAAGCCTTTCTCCAAGCCTCTCTATGCCAAAAAATAAATAATAAAGTAAATCATAAAGTTTTTCTTGGAAATCAGTACAAGGTGCTGTGATGAATAACAAACTGGAATTAACTCTGTCTTTCTTAGGCCATCATACGGGACTCAGGTCTGGGTAAGCCTCCTCTCGGTCTTGTTAATACAAGGCCAAATAGTTGGTTGTATCTTCATTATTTATTTCAAGTCTTCAAGGAATAAAAACACTGGTTTTTCTAACCTTGACTGTTATTATATGAAAATCGATCTATATCATTATATCTTAGTAGTGTCTACAAAAGGGACCAAATATATTAGTGTCTAAAAACAATACATAGAATACGGAAGTCAATATATATCCTCCCAGTCAGAGATTTAAATTTAGAAATTTCTAATTATTGTCCTCACCACAGAAATTCAAGAAGTGAGTGTGCCACTCTCCTTCATGGAAAATTAGGGTTGGCCAAGTTCCAGGGGTAGAAATAGGGTTTTGTAGGGCTTTAGCTATACGGTGGAAAATACGTAACTTAGAAAATATGAAGAGATAAGGTGGTGAAAAAATGCAAGAAAACATAAAGGAGAACCAAGATCCTGAGTCCAAGGAAAGCACATAAAATCCCACAGCTGGGAGCCAGAATAGGGGATTAGACATAAGTTACAAAGCTGAGAATTGCGCACTCTGGACAAGTGAAAATCGGGGAGGTGAATGAAGGTCCTATTTTCTAGAAATGTTTTCAAATATCAGGGCAGCTCAGAGTGATAAAAGCCCAAGTCATTTCCATCTTTTGACTAGTTCAGCTTTTTAAACATCATAATAAATGCTCAATCAGAAGTATAAAAATTGTGATATAGTTTAATGCTCACTTTTAACAAATTAATCCTTTTAACAAAAGCTTTGTAATGCAATGCAACTGTGCCATCCACAAAGCAATGATCAAACTTTGAATTAAAAAAACACACATTTGTAGTACCTGTTTTGGTTAAGTTTGGGAAACCAAGTAAGTTGAATGCTGTGTTCTTTTTCAATTTTGTCAATATTTATCTGTAATTGAGTATATAATCTAACATTTACATTAGCAATGTAAACTTTACATTAACAATATAAGGTCTTTAATGAATGTGAGGCTTGGCTCAAGTCTCTTGGCCTCGTCATATCTGTCCCTCCCAGGATAAATCTTTTAAATCTCAGCTGGCCACTCATCTTTATTATTGTGATGAGTTTGGCTGACCTCAGGGTTAGCATCAACACTATATGAATTTATATAGCCATGAAAAAACTGATTTAACGTTTCTGGGGCATCTCTGATGGGTAAATTACCTTAGAGACATGTTTTATTTACGTTTTTGTTTGTTGACTTCTTTCACTCTCTTGCATGCAAATCTTTGTGTCTTAATTTGCCTGGACTTGTAATTCTCATGACCACAGCAAGACTAAAAGGGAATCTTTGGAAAGTGCTTCTTTAATTTGATGAATACAGACGGGTAATCTGAATAAATTCTGTTAAAGTATATTAATTATCCATTGTGGCAGTCCACACTAATCAATTTCACCAGAGGTTGCTTGTGTTCTAGATCGTTTTCTGCATGGAAGTCATAGTCGAAATCATTATTAGGACCCATGTAACAGAGAACATTAGGGACATATCAAAGTTAGCAAAATAAAGTAATATTTATAGAACCTCTTCACTTACAGTTGTCTTTATATTAATAGCCTACTTTTTTTAAAGAATAACATAAGTAACTGCACATAGGAAAAAGCTCGATTATAGTAAACTAAAGGAAAAAAAAAAGATCCTCCATTACAGAATCTAGCACTTGGAAACTCCATAATATATAGCCTAGCTCTTTACATTTTTTTTTTGAAAAGTGTATGTATTTAAAGTGTTCCCTTAATATCTTTGAAGATAGATTTTTGAAGTCAACTTTTTAATTTTAAAATAGCTACATGTGCTTCAAATCTGGTGGTTCAAGATAATTTAATCTCCCTAAGGATATAACTCTTACAGCTGTAAATGACAAAAAAAAAAAAAATCCATTGATTTAATCAAATAAGGAATGTACTGAATCATACAACTGGAATGCCTGGGGTGTGGACTGCCACAAGTCTTGCTTCAGCTAGGGTTAGATTCAAGGGCTTAAATCAGAAAAATATTAATTTTTTCTATCTCAGATCTATTTTCATCAAGGTTAACCTCTTCTCCAGGTAGCATTCTCTTTCTCTATATGTAACATAAAGGTCATTTATTACTCTAAAATTACATTCTACCAGTTTATCAACCAAGGAAATAGTGCCTCTTTCCTAATCTTTCCAGCAAACCTCTCAGGTAGGATGCCCATTATCTCAGCTCTAGTCACAGGCTCATCCAGGAACTGATCCTGTGGCTGAGAAATGAGGTGGCCTTAATGCCTCTACTGGAAACATGTAGAAGGAGAATGGAACAAAGGTGTCTTCCAAGGAGAACACCTAGAAGCAAGAGAGATGAATTTTGGGTGGGTAACGACAACTTGTTCATTAGAGAGCAGGATTATGCCTGCTTTTCCTCTGGCCCATACTGCATGCCTCACTCCTTCCCTGCAGCATCTACCTGTTAAAACGCACATGGTAAAAAGGAGTACATGTTGAATAAATCAAGGCATGAGTTTCGTTTCAGAGTAGAATGGGAAATTGATTGGCTCTGAAATCAGAGAAAACTGTTTTCTAATTGTGGGTCTACAACATACTGAGAGATCTTGGGGAAAATTAATGTGTGTGCTTTCATCTTCTCTTATGTAAGTCAGGGATAATACAGGGATTTTTAAGAGAAAAAGATGTGAATATATGTAAATTACATAGTCGAGGCCTTTTGTTTGAAAAAATTAAGTCTAGTCTCCATTAAAATACAATTCCATTCTACTAGAATTATCATTTAAATTTAACTTATTTGAAATTTAATATTTTATTAAAACCTAATTGATTTTTTCATAGGATTAAATAATGTAATTTAGTATCTATTGATTTGGGTTCAGACATATTAAATAAATTTTAATGCAATGTCTTTGTGTTTTTCATAAAACAAAATTGAAACACATTATTTAAGGACATTCTACACTTGACCTATTTTCTTATAAAAATATGTGCCTGCCCCTTTAATGTTTGGAACGGGTAGATAATTCTGTCACTTTGTGTAAGTGTATAAAAGAGGGAGAAAAATAATGATGTTTTATGTCCTGAAACAAATAATATTTTACTCTTTCCATTTCTGTTTACCCCAGCCTCCGGAGGACTTAGAGGCAATATTGTGGAAGAGTTATCTTTTGTATATGTAATAGACCAAAGAATAAATATTAAATCCGCTGCTTCACTTCTCCTATCTGTTTCCCCAATGTCCCAAGTGGGGTCAACTCTGATATCTTTTGCTATTACAACAATCCCAGAAAGATAAAAGGGACTGGCATGCTAACCTAAGGAAACTACCTATTGACAATATTTTTTTGTGATTTAAGAAAGAATAAGCCTATCAACAAATACACTTCTTCAGTGGTGGATGACATAAAATTTAATCATGCATAGTCCTTCTTTTGGATACACTGGCAAAAAATAAGATGCCAAAGTGGCATTCAGCATATGGAACACTGAAAAAAACATTCTACAACAGACTTTTCTACGTTGTCCCATCAAAAATAGTTCAGGTAGGTGTTAAAGAAAAAACTATTGTAGACATGTCTAGACAACACCAAATCCTGTCCCTGTGCACATTTTGGAAGAACTAGGGCCTGAGTGGGGAAAAAAGCCCCAAGGTATTTTGGAAAAGGCTAATGTGTTTGCTTCCTGGAAGAAGCAACACCTGATAAGTAAAATATTTAAATAGGAAGTGATTCACCCTATTGCTGTTAGTCCATTGGGCTGTCATCATACATTATAGACATGACTCTAGACAGTGTCATTAGAGAAAGTTCACTGACAGTGTAATCAGTTCAATCCCTGGTGATCTTCTTCCTAAACATTGTCTAGATTCATCTATCCCCATACTTGGTAAACATTTTCGCTAACAAGCCTCTTAATAAAAAAGAACAAACTCCCATTCCCCAAGTATGTGGAGATTCGCCCAAAGTAATGACACATTCTTCAAGGTTTTTTATTTTAAAAAGCAATTTGCATCTCAGCTTCTATATAATTGAACAAGTGTGCTTGCTTCAGTGAACTGTATAGTGTAAAAATACTCATTTGAGTTTATTCCCATTGAACTGACCAGATCTTTAAGTACAAATGTGTGCAGCAGCTAGATTTGTGTGACTCCAGCTTTAATATTTATTTCACAACACCGTTCTACAAGCACCAAGAGGAATGGAACTGTGACTCATTTCTTCATTGCTGTACCCCCAGGGTCTAGTCAGTACCTGGTAAAGAGTAAATACTTGATAAATGTTTGTTGACTGAATGAAAGAAATAAGTAATTAACATGCCGTGTGTATCCTCCAGCCTTTCCCATTGTGTTTTTCTCAGTGGCACACCCCCAAGAGGATGTGTACTTCCATTTGAAAAGCACTGCTCGATAGGATGCAAATTGAAGCCAAGAATCAGAATTCACAGAGACAAATTAATGAAACAATTTTCTCTTCACTTCTGTGATTTTATTAGCTGAATTATGGGTGCGGCTTATTTCATGGATCAAATGACCGAGTCTTCTAAGTCTGTGGGCTCGGTACTCAGCAATTATCCAGTTAATATGATTAATGTCGACAGTAAAAATGAGCATCAGCTTGGTCACGGGGGTCTCATGTTTCTGAGGCTTGGAAACCACATCGAATCTGCGGAAGAAATGTTCTTTTGAAGGAATTAAGCTCCGGAGGATACCTTGTTCCTATCCACTGCCTCCATATGTCTTCTGCCCTCTCATTCTTCCTCCTCCTCCTCGGATAACTCAATATTTTTTCAGATCTTCATTTCTGGCCATGCTGCATGTATGTATGTTGTCAGTCTGAATTACTTCTAATTTCTCAAGCATCAGAAAGACAATCCTGTTAAAACATGATGGCAAAGCCCTGACTAGACAGTTGGGTATGATGGCCTATGGTCATGTGGGAGAGGAAAATAATCGCTGATTAAAAATATTATTTTACCTCAGAAATGCTCACTTTTTAAGGGAAAAGTTGTCTTAAATCCAAAACCAAAAATAAAAAAATCAGTGAAGGGCATTTGGGCTACCTTTTGTTGAGCACATCTCAGATGCTACGTACTTAAAAACATGAACCTATTGAACCTATTCACCTCTCTGCACCAACCTGAGTAGGAAGGTCCTGCTGTCCTCTGAAGACAGGGCAGGGAGACTCGAAACAGTGAAGCCTCTTGCTCAATCATAGGTGAACCTTGGCAGAACAAGGGTCCAGTGCCGATCCGACCTAAGGAAACTACCTTTGACAATATTTTCTGTTCTGGTTTAAGAGAGAATAAGTTTATTAGCAAATATACTTCTTCAATAGTTGATGACTTAAATTTCATTAGGCCTAGGCCTTGTTCTCATACACCGGCAAAAAAGTAAGATCCCAGAGTGCCATTCAGCTTATGGAATGCTGAAAAAAGCATTTCTACAACATTACTTTTGTATGTTCCCCTATCTAAAATAGTTCAGGTAGGTGTTAAGTAAATAAATACTATTGTAGTCATGTCTGGACAACACCAAATCCTATTCCTATGCAGGTTGGATCATCAAAGCAAGGATGTAAAGGATTAAACAGAAGTTGTGGATACAGAGTGGAAATTTGGTCAGAGACGCAGATAGAGAATTAATCACAATCAATAATTTTAACTTAAAAGCTCTGTCTGGAAAATCTGAATTCTTAACCACTGTGTTACATTTATTTTGGCTCTGTAGCAGGTCAAAGACAGAACTATCAACTGAGCAACATCTAATGTAAGACTTTAAGTCTGGCGCACGCACGTACACACGCAGAAAGAATAAGCATATTTCAGTATATGTGGCCGGGTAAAAATGACAATGAATTATTCTTGCAACCAAATTCAATAGTCTGAATAGGACAAAGTGAAATATTGTCACTTTATACCTCTTGATTATGTTTTAATATCTCCTAATACCACAGCTAATCTTCGGGATACTAGAATAGCTTGTTGAAATCATGTAATTTGAAGGCTTCACCTAGAAATCTTCCATTTGAAATTTGGCCATCAACATGTTACTCTATCACCTGGAATGAAACTTTACCAATGGGCTGAGACTCACATTTATTTTAAATTTCTCTTTACAATGCAAAATATGCTCATGACAGACAGCACATATTGCCATAAATCCCATTTAGATCCCATTTTTTGGAGTGATGACTATATAAGAGTTCTAGTTTATACAACCTCAAGTGGGTTTTTTTTTGTTTCGAGACAGAATTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCACAATCTCGGCTCACCACAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGTGGGATTACAGGCATGCGCCACCATGCCCCTCTAATTTTGTATTTTTAGTAGAAATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCTCGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCAGCCTGTCAGGTGGGTTTTTATCATCTGCATTTTCAGAAAGACAAGGGATTTTCCCAAGGCCACACAAATCAGATATGGTAGAGCTTGGATATTGGGCACTTTTCTTTAGCTTTTCCCATTGTGAACTTTCATATTCTGTAAGGAAATTTAGAAATGAGTACCCTAACAGAGCCCTAAGAAAATGGGACACTGAGTAGTGAGTTTTCATAAGACTTATCAATAGAGGACAGGAACAAAAACGTGCTCATGGCAGGGGTACATGTTCTAGCAATAGTCACAGTGACAACATGAAGATTCCCAAGGGCTAAAGTTAAAGACTAATCCTCATCAGTTCTCAGATTTGCCAAAGAAAGCCCAACTATAAGGATTGGTGACAGTTAATATGATTAATGGAGACAGCACACTACATTTAATAAAGTGTTTTGTCAGCAAAGATATTTTCCATTTTGAGCAATTTAATTTCAAGAAGTTCATATTCTATTCAGGAGGGGATGCCTAAAATACCTCATCTGAAAAAATAAAGAATTGCATAAAATATTTAAATAGAAAATGTATAGTATGTGCACATGTGGTATGAAGAGCTGTATAACTGTTACTTGAAGAAGGCATTCAGTGTGAGTCTTCCAGGTTCTCGGTGTGTTGAACAAAGAATTGAACAAAATGCACAAAGTAACAAAAGAATGAAACAGTGAATGTAGGGATTTATTGAAGTGAGAAAGCACTCCACAGGGTAGGAGTAGGCCTGACTCAGTGACTCAAGGGCCTAGTTACAAAATTTTCTGGGGTTCCATACCTTTTAGAAGTCTCTTATTTGTTACCACCTATGTGGATGAAGGATTTGACCCACAGCCAACCCGAGGCCAGAATGGATTGGTGCCTTATGCAAATGAAGGAATGGCCTACGCTTGCCCAGGCCAATCAGGGGCACTTTGCATTTCCCATATGTGACCCAGTGGAAGGGAGGAGGTTGTAAGGAGAGTAGCCTTTTGATCCTGTGTTATTTGGGTCTGGGAGGTGGGTTCCCTTTTGATTCAGTTTTAGGAAGTCAGTGCAAATTGGCCTTTGGTACCCTGTCTCCAGACCCTATTCTCCTGCCTCAACTGCAAAGTGGGGAAGGGTGAATTGTGGTGTCATCTGCATTGCAGTGATAGCTTGAAATCTGGGATGGTTGAAAGCCACGAAGGAAGCTGGAGAGATGGCAGCACTTAAAATACCTCAAGTACAGGCATTGGGGAAGCCCTACATTTAGGGAGAAGAGGAGGATTTCCAGGACACAGACTGGAAGTGGCTAGGCAGGCCAGGGTGAAGCACGAGGATTGACTTGGGTCGTCAAAGCAAGGATGAAAAGGTTTCAGTAGAAGTTGTGGATACATTGAGACTGGAATTTTGGCCAGACAGCAGATAGAAAACTAATCACAAGAATAATTTTAACTTAAAACAAAAATGAAATATCTTTCAACTAATATGTAAACAGAAAAACTCCATTTCTGCAGGTCTTTCTTTTGAATTTGGAAATGCTCTGATTTCATGTGCCAATTATGTTTCCTAGATCGTGCAACCTTGCCACAGCCATGTATAGAATATAGAGCAATTGTGTTTTCCCCAAACATGATGAAGAAGCATTTTTACCCATGCAGTGGACTCCTGGTGAACTTCATTATTTTCCCTTTCTTTTTTCATTGCTACCTTCGCCTGCCTTTTCACAAGCACAGACTTGAACATTTGCTACTCTCTTTATCTCTCCAAAGGCCCTGTTTTATTTCTCAGCAGCTGCCCCGTTTCTAAGGAGGTGAAGTTCCCTTTCAAAGCTGAACTTCAGACTGCACCTTGACCATTATTACTGCAACTCTCAGCTCCAGGACAGCGTTTAAGGCAGACTAACCAGAGACCTGCTTCCCCAGCCTGCAATTGAGGAGAAAAAAGCAGACTATAGCAGGAGGAATTTGCGGTGGATTGTATGGTATTGCTCACATGAAGCTTCTTGGTATTTTTCTTTATATGAGATCAATTTCCACACTTTTCTTCAACTCTTTCCTTCCTGGACTTTTATGAGGTCAAACTACAGATAAAGGCAAACTCATAGAGGCAACAAGAAAGGAGATGGACTGTTGGTCTTTATTTTCTTCCTCCTCTTGATAATCTTACCCCTTCTCTTCATTCCTCCTCTAAAATTTACCCCAAAATTGAACTTTATGGATGGTAGAGAGTTAGTGATTTATTATTCTCTAGCAAGAGTATTTTTCCTTTCAGATGTGTGTCTTTAGAAGTCCTATTTTAATGTCCACAGGTACCCCACAGATAGATTGAAAAAGAGGATATCTGCAAAAGCCCAGTTAGCCAATTTCGTGAGTGTGATCAAAGGAGTTCAAAGGCAAATTCAGGTCTCAAGGAAAGAGATACGGGAAATGAAACAGACCAAAGCCTGTTCTACTCAACCTAGTGGAGGACAGAGGCTTTGAGGATAAGGGAAGAGGAGGAAGAAACTAAGAAATAAAAGAGGTCAACTCATGATTGAGCTAGAAAACTACAACTGGAAAAGAGGTTATAGGTGGCAATTTAGGGATTTCTGAGTAAGACTGGGACTTGAAAATAAGTATCTAGATCTCCCCTCCTGTCTCTTCACTGAAGTTTCTAAAGGCACATTAAGGTGTGGGGAAAACACTTTTAGAGCTGAGGACTTCAGAAGGAGGTCATCAGCAGGTGAAAGTTTGAGTTTTTCTCATGAAAAATAGAACTAGATTGAAAGAAGGAAGACACAGCAGGGAAACTCCACCTCCACTACTCCACCAGCTCTAAGAAACATCTTTAGGATGAAAGCCTAGAGGACCATGTCAAAACCTTATTAACACAACCTAAACCAGAAGAGAAAGTACTGGAGCTAAAATTGGGCCATTTCCTGTGAACCCTCTGTGAAATTATGACCAAAGAAAGTAGAAGGGAACATCAGCCTTGGGATAAATGTGTTGCCTGCAGATAAACAGTGTAGCAGATCCCATCTGGGGCTCTAATTCTTAACCTCTCTCGACACCCGCACCTTTTGCTATGTGACATCAGAGCTGTCTTCCCTTGTCTGCCCCACGGGCAGAGTAAACCCCACTGTACCTCCTGACTTAACAGTGTGGCCATGTGACTTGCCTTGGCCAACAGAACAAGGCAGTGATGCTGATGTGCCAGTGCAGGGGTGACACCTTAAGGGACCTTGCATAATGCCATTCACATGGGACAGAACTAACCCAGAACAACCTGCTGATCTTGGCAGAGCAGCCAACCCCCAAGCTCAAAAGCTAAATACTTGCTTTTTGTTGTATGCTGTTCGAGACTTTTGTGGTTGCTTTTTTCACAGCAATAAGTTACCAATATAATACACAAGGGCTTGTCCCTAATCTACCAAAGATCATAGTGGCCTAGACCTGCTATGTGACCATGAAAATAAATGACAAAATGTTTTGAAAACAAGGAGTTCCTGCAAATGAATGCACCAAAACCATAGAAATCAGATCCAAAGATGGATAAAGGAAACCAGAATGAATGTTGTTCTTCTTGCCCTGGATGGGCAGGTTGACTTAGTAATGTAAATCAGTGTTGAAGCTATTCACATATTTTCTTTTCTGGATTCACTTATTTGACATTAATCCAACAAATATATTTTAATGCATCCACTATGTATTAGGCAATAAAGTGCTTTGGAAAAAGTGCGGAGGAGCAGGCAGACACGGTTCTGGCCTTCAGGAAGTTTGATGTCCATCAATTCAGGAAGCATGCAAGGCGTGTTTTGATTTTTTGCCGGTCACTATAAAGGAGAAGATAATGGAGTAACTTGCATACAGTTATGGAGGGCAAATAATATCCCATAAGAATTGCTTACGGAAACAAGTGTTTTTGAAGACAATAAAGAGTTGTTTGTCAAACAAAAATTAGAAGTGTATAACATTCATATTGTCTTCCTTAGCCCTCCCCACAAAAAACTAATATGTGTACTGCAACCAACCAATAATAAGAAATTCATAAAACAATTAAAGATTAACATTAAAACTAGGCCTGGGCATGGTGACTCATGCTTGTAATCCAGCATTTTGGGATGCCAAGGTGAGAGGATCATTTGAGGTCAGGAGTTCAAGACCGGCCTGGCCAACATGGTGAAACCCCGTCTTCTAAAAAAAACAAAAATGAGCTGGGTGTGGTGGTGCATGCCTGTAATCACAGCTAATCAGAAGGCTGAGGCATGAGAATCACTTAAACGTGGGAGGCGGAGGTTGCAGTGAGACCAGATCCTGCCGCTGCTCTCCATCCTAGGTGACAAAGCAAGACTCTATCTCAAAAAAACAAAAAAAAAACAAAAAAAAAAAAAAACAAAAGCCATTTAAGCATGGAGGACAGCCTAAATAATTACTAAATACATAAATGTTTTTAAAATTTTAAATTTACTTTTAAAAATACCAAAAACAATACATAAGAAAACATCCAGAATATAAAATTTTAAAATACAAAATCTAATATTAGTAACCCTGTGCCAGGTGTTGGAAAACTATGGCCCACAGAACAAACTTGCTCACTGCCTATTTTTATAAATATTTATTGGGACATAGTCATGCTCATCCATTTCATATTGCCCATTGCTGCTTTTACATTATAACCACTGAATTGAATAGTTATAACAGAGACCTTATGGCCTACACAACCAAAATATTTGAATTGCTACCAAAATAACTGCTGACCGTCACTCTATAGTGATAAATTTGGAATTCTTAATTAAATGAGTAATATTTTCAAAAAGTATACATTTCAAAATTTATCCAAGAAAAAATAGTGAAAAAAAAACAAAAGGAAAGCAATGGATGGCAAAATAGTTGTTCCATGAATACATCTCTAAAGAGCTTTGATGCTAATTTAGTCAAATTTTCAATACTGTACAATCTTCTCTAGAGCAGAGCAAAAGAATAAAAGCACTTCTAGCTAATATTATGTGGCATAACTTTGATATCAAAACATAAAGCTTTATATAAAAAGATGCCAAATATCAATCTCATGTACTAATATTGACATAAAAATAAAAGATTAATTCAGTCCACTACTATATAAGAAATATGAATTAAAGTTTATGTCAAGAATGTTAAAAAGCCTCCATGTTATCTCTTGAACTAATTGATTGGTTGCTTTCAGTT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9440:HG3_PB_SVrefine2PBcRDovetail_9169:HG2_PB_SVrefine2Falcon1plusDovetail_7046:HG4_PB_SVrefine2Falcon1Dovetail_11659:HG4_Ill_SVrefine2DISCOVARDovetail_13037:HG3_PB_SVrefine2Falcon1Dovetail_11645:HG2_PB_SVrefine2Falcon2Bionano_9253:HG2_PB_SVrefine2PBcRplusDovetail_6534;NumClusterSVs=8;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_11645;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00712793;ClusterMaxSizeDiff=0.00712793;ClusterMaxEditDist=0.0103796;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=41252;DistBack=8745;DistForward=12527;DistMin=8745;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=11;REFWIDENED=20:54123230-54123240;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3220.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:111:1/1:0:32:0:22:1/1:0:21:0:11:1/1:0:40:1/1:0:590:.:41361:.
chr20	59477978	HG4_Ill_SVrefine2DISCOVARDovetail_13069	T	TGATGCCCCAGGGCAAGAGTCATTCTCAACATCTCACACAGCACAAGCAGCTCATCCTCCATGCAGCTGGCCTGGATGGGGCATCCGG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7072:HG4_PB_HySA_27090:HG3_PB_pbsv_18473:HG2_PB_HySA_34002:HG4_PB_pbsv_18720:HG4_Ill_250bpfermikitraw_24094:HG2_PB_PB10Xdip_18494:HG2_PB_pbsv_18783:HG4_PB_SVrefine2PBcRDovetail_9469:HG4_Ill_SVrefine2DISCOVARDovetail_13069:HG2_PB_SVrefine2PB10Xhap12_13739:HG2_PB_SVrefine2Falcon2Bionano_9286;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7072:HG4_PB_SVrefine2PBcRDovetail_9469:HG4_Ill_SVrefine2DISCOVARDovetail_13069:HG2_PB_SVrefine2PB10Xhap12_13739:HG2_PB_SVrefine2Falcon2Bionano_9286;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0967742;ClusterMaxSizeDiff=0.0879121;ClusterMaxEditDist=0.290323;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=87;DistBack=110772;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=349;REFWIDENED=20:59477979-59478327;PctSeqSimilarity=0.9921;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-166;EndDistance=-166;GTMatch=0;TruScore=66;MatchId=3241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:42:./.:12:14:7:16:./.:4:0:5:0:0/0:20:0:./.:.:.:.:.:.
chr20	59950521	HG2_PB_SVrefine2Falcon2Bionano_9297	G	GATGGTGTGGTTTATTGATGGCAGTGTGATTGTCTTGGTGGTGGTGATGATGGTGTGGTTTGTTGATGGTAGTGTGATGGTCTTGGTGGTGGTGATGATGGTGGCGCTGGTGGTGGTCATAGCACTGGTGGTGGTCATAGCACTGGTGGTGATGGTATGGTTTGTTGATGGTAGTGTGATGATCTTGGTGGTGGTGATGGTGTGGTTTGTTGATGGTAGTGTGATGGTCTTGGTGGTGGTGATGGTGTAGTTTGTTGATGGTAGTGTGATGGTCTTGGTGGTGGTGATGGTGGTGCTGGTGGTGGTCATAGCACTGGTGGTGATGCTATGGTTTGTTGATGGTAGTGTGATGGTCTTGGTGGTGGTGATGGTGTGGTTTGTTGATGGTAGTGTGATGCTCTTGGTGCTGGTGGTGGTGATGGTGTGGTTTGTTGATGGTAGTGTGATGGTCTTGGTGCTGGTGATGATGGTGGTGCTGGTGGTGGTCATAGCACTGGTGGTGATGGTATGGTTTGTTGATGGTAGTGTGATGGTCTTGGTGCTGGTGGTGATGATAGTGGGGTTTATTGATGGTAGTGTGATGGTCTTGGTGGTGCTGATA	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7690:HG2_Ill_breakscan11_4917:HG4_PB_pbsv_18737:HG3_PB_HySA_28049:HG2_PB_pbsv_18801:HG2_PB_PB10Xdip_18518:HG4_PB_HySA_27108:HG3_PB_SVrefine2PBcRDovetail_9212:HG4_PB_SVrefine2Falcon1Dovetail_11703:HG4_PB_SVrefine2PBcRDovetail_9480:HG4_Ill_SVrefine2DISCOVARDovetail_13078:HG3_PB_SVrefine2Falcon1Dovetail_11681:HG2_PB_SVrefine2PBcRplusDovetail_6578:HG2_PB_SVrefine2PB10Xhap12_13756:HG2_PB_SVrefine2Falcon2Bionano_9297:HG2_PB_SVrefine2Falcon1plusDovetail_7085;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7690:HG4_PB_SVrefine2PBcRDovetail_9480:HG4_Ill_SVrefine2DISCOVARDovetail_13078:HG3_PB_SVrefine2Falcon1Dovetail_11681:HG2_PB_SVrefine2PBcRplusDovetail_6578:HG2_PB_SVrefine2PB10Xhap12_13756:HG2_PB_SVrefine2Falcon2Bionano_9297:HG2_PB_SVrefine2Falcon1plusDovetail_7085;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0472175;ClusterMaxSizeDiff=0.03895;ClusterMaxEditDist=0.304239;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=600;DistBack=8194;DistForward=279;DistMin=279;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=645;REFWIDENED=20:59950522-59951166;PctSeqSimilarity=0.9487;PctSizeSimilarity=0.975;PctRecOverlap=0.1248;SizeDiff=15;StartDistance=-518;EndDistance=-518;GTMatch=0;TruScore=68;MatchId=3247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:116:1/1:0:9:0:14:1/1:2:301:3:354:./.:0:4:1/1:1:58:.:.:.
chr20	61386405	HG2_PB_SVrefine2PB10Xhap12_13795	A	ACTCCATCCCTCCCTCCATCCTTCCATCTATCCTTCCCTCCCTCCATCCATCCATCCTTCCCTCCCTCCCTCCATCCATCCTTCCTTCCCTCCATCCATCCATCCCTTCCTCCTTCTATCCCTCCACCCCTCCCTCCTCCCTTCATCCCTCCCTCCATCCATCCATCCTTCTCTCCCTCCTTCCCTCCATTCACTCCTCTACCTCTCCCTCCATCCATCCCTCTCTCCCTCCTTCCCTCCATTCATTCCTCTACCTCTCCCTCCCTTCCTTCCTCCCTCCCTCCATCCATCCATCCCTCTCTCCCTTCCTCCCTTCATCCCTCCATCCACCCTCCCTCCCTCCCTCCATCCCTCCCTCCATCCATCCATCCTCCCTCCCTCCTTCCATCCATCCTCCCTCCCTCCATCCATCCTCCCTCCCTCCCTCCATCCATCCTCCCTCCCTCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11743:HG2_PB_SVrefine2Falcon2Bionano_9326:HG2_PB_SVrefine2PB10Xhap12_13796:HG2_PB_SVrefine2Falcon1plusDovetail_7122:HG3_PB_SVrefine2Falcon1Dovetail_11715:HG3_PB_SVrefine2PBcRDovetail_9241:HG2_PB_SVrefine2PBcRplusDovetail_6612:HG2_PB_SVrefine2PB10Xhap12_13795;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13795:HG2_PB_SVrefine2PBcRplusDovetail_6612;NumExactMatchSVs=2;ClusterMaxShiftDist=0.271493;ClusterMaxSizeDiff=0.271493;ClusterMaxEditDist=0.276018;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=446;DistBack=7490;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=910;REFWIDENED=20:61386406-61387315;PctSeqSimilarity=0.9174;PctSizeSimilarity=0.7691;PctRecOverlap=0;SizeDiff=103;StartDistance=-621;EndDistance=-621;GTMatch=1;TruScore=56;MatchId=3270.0.3	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:0:20:2:12:1/1:1:198:0:191:./.:0:1:./.:1:10:.:.:.
chr20	62122972	HG2_PB_SVrefine2Falcon1plusDovetail_7157	G	GGGATGGATGGATGGATGGACGGATGGATGGGGAGGTGGTGGATGGATGGATGGATGTATGAATGGGGTGGTAGATGGATGGGGAGGTGGATGGACAGAAGGATGGGTGGGGAGATGGATGAGTAGGGAGATGGATGGATGGATTGGTGGATGGATGGATGGATGGATGGATGAGGAGGTAGATGAGTGGATGGACAGAAGGATGGATGGGTAGGAAGGTGGGTGGATGAATGGATGGATGGGAGGTGGATGGATAGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGGGGATAGATGGATGGATGGATGGATGGACGGACGGATGGGGAGGTGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGAGGAGATGAATGGATGGATGAATGGATGGATGGATGATGGAGGGAAGGATGGCTGGGTGGGAGATGGATGGATAGAGAGGTGGATGGGTGGATGGGGAGATGGATGGATGGATGGATGGATGGGGAAGTGGATGGATGGGAGGTGGATGGATGGATAGGTGGATGATGGATGGACAGAAGGATGAATGGGTAGGGAGATGGATGGATGGATGGAGGGAGGGATGGATGGATGGATGGATGGATGGGTGGATGGATAGAAGGATGGATGGGTGGGGAGGTGGGGTGGTGTGGATGTGGAGAGATGGATAGATGGATAGATGGATGATGGATGGATGGATGGATGGAGAGAAGGATGGATGGTGGGGAGGTGGGGGTGGGTGGATGGGTGGATGGATGGATGGGTGGGGAGGTGGCGGGTGGTGGATGGATGGATGCAGAGGTGGGTGGATGGATGGATGGAGAGAAGGATGGATGGGTGGGGAGGTGGGTGGGTGGATGGATGGATGATGGGGATGGTGGGGGATGGATGGATGGATGGATGCATGGATGGATGGATGGAGAGTGGGTGGATGGGTGGATGGACAGAAGGATGGATGGGTGGGGAGTGGGTGATGGGTGGATGGTGATGGGGAGGTGGATGGATGGATGGATGGATGAAGGATGGATGGATGGGAGGTGGGTGGACGGATGGATGGATTGGGAGGTGGGTAGATGGGTGGATGGACAGAAGGATGGATGGGTGGGGAGGTGGGTGGGTGGGTGGATGGATGGATGGGGAGGTGGATGGATGGATGGTTAGATGGGGAGGTGGGTGGATGGGTGGATGGACAGAAGGATGGATGGGTAGGGAGGTAGGTGAGTGGATGGATGGATGGGGAGATGGATGGATGGATAGAGAGAAGGATGGATGGGTGGGACAATGGAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9269:HG3_PB_SVrefine2PBcRDovetail_9270:HG2_PB_pbsv_18920:HG3_PB_pbsv_18599:HG2_PB_SVrefine2PB10Xhap12_13835:HG2_PB_SVrefine2Falcon1plusDovetail_7157:HG2_PB_SVrefine2Falcon2Bionano_9354:HG3_PB_SVrefine2Falcon1Dovetail_11753:HG4_PB_SVrefine2Falcon1Dovetail_11775;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7157;NumExactMatchSVs=1;ClusterMaxShiftDist=0.146108;ClusterMaxSizeDiff=0.146108;ClusterMaxEditDist=0.339992;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=1306;DistBack=415;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=980;REFWIDENED=20:62122973-62123952;PctSeqSimilarity=0.9561;PctSizeSimilarity=0.9886;PctRecOverlap=0.5859;SizeDiff=-15;StartDistance=-540;EndDistance=-540;GTMatch=1;TruScore=84;MatchId=3279.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:3:17:0:10:./.:15:158:18:178:0/1:21:3:0/1:21:63:.:5543:.
chr20	62177852	HG3_PB_pbsv_18601	G	GGAAGCGTGGGCCCCTGTCTCAGTCCCCCAGTCCCAGGCCCCTGCTCACCTGCCCTTCAACCAACGAAGCTCCTC	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6640:HG3_Ill_GATKHC_29423:HG2_PB_pbsv_18921:HG3_PB_assemblyticsfalcon_15831:HG3_PB_HySA_28178:HG2_Ill_GATKHC_29529:HG3_PB_pbsv_18601:HG2_PB_HySA_34185;NumClusterSVs=8;ExactMatchIDs=HG3_PB_pbsv_18601;NumExactMatchSVs=1;ClusterMaxShiftDist=0.189781;ClusterMaxSizeDiff=0.189781;ClusterMaxEditDist=0.347222;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=74;DistBack=-190;DistForward=2714;DistMin=-190;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=67;REFWIDENED=20:62177820-62177886;PctSeqSimilarity=0.9427;PctSizeSimilarity=0.973;PctRecOverlap=0;SizeDiff=2;StartDistance=-83;EndDistance=-83;GTMatch=0;TruScore=63;MatchId=3280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:36:0|1:28:2:1:33:0/0:17:0:7:0:0/0:26:0:./.:.:.:.:.:.
chr20	62202471	HG2_PB_SVrefine2PB10Xhap12_13838	A	ACCTGGGAGCCTCTGGCTCTGCCTACGGTGGGCTCCTGCCCCGCTCCAAGCTCCTGGGAGCCTCTGGCTCTGCCTACGGTGGGCTCCTGCCCCGCTCCAAGCTCCTGGGAGCCTCTGGCTCTGCCTGTGGTGGGCTCCTGCCCCGCTCCAAGCTCCTGGGAACCTCTGGCTCTGCCTGTGGTGGGCTCCTGCCCCGCTCCAAGCTCCTGGGAACCTCTGGCTCTGCCTGTGGTGGGCTCCTGCCCCGCTCCAAGCTCCTGGGAGCCTCTGGCTCTGCCTACGGTGGGCTCCTGCCCCGCTCCAAGCTCCTGGGAACCTCTGGCTCTGCCTACGGTGGGCTCCTGCCCTGCTCCAAGCTCCTGGGAGCCTCTGGCTCTGCCTGTGGTGGGCTCCTGCCCTGCTCCAAGCTCCTGGGAACCTCTGGCTCTGCCTACGGTGGGCTCCTGCCCGCTCCAAGCTCCTGGGAGCCTCTGGCTCTGCCTGTGGTGGGCTCCTGCCCCGCTCCAAGCTCCTGGGAGCCTCTGGCTCTGCCTACAGTGGGCTCCTGCCCCGCTCCAAGCTCCTGGGAACCTCTGGCTCTGCCTACGGTGGGCTCCTGCCCCGCTCCAAGCTCCTGGGAGCCTCTGGCTCTGCCTGTGGTGGGCTCCTGCCCTGCTCCAAGCTCCTGGGAACCTCTGGCTCTGCCTGTGGTGGGCTCCTGCCCTGCTCCAAGCT	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11779:HG4_PB_HySA_27200:HG3_PB_pbsv_18606:HG4_PB_pbsv_18857:HG3_PB_HySA_28183:HG2_PB_pbsv_18925:HG2_PB_HySA_34188:HG4_PB_pbsv_18855:HG2_PB_SVrefine2Falcon2Bionano_9357:HG4_PB_SVrefine2PBcRDovetail_9523:HG3_PB_SVrefine2PBcRDovetail_9274:HG2_PB_SVrefine2PBcRplusDovetail_6643:HG2_PB_SVrefine2PB10Xhap12_13838:HG2_PB_SVrefine2Falcon1plusDovetail_7160:HG3_PB_SVrefine2Falcon1Dovetail_11757;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13838:HG2_PB_SVrefine2PBcRplusDovetail_6643:HG3_PB_SVrefine2PBcRDovetail_9274;NumExactMatchSVs=3;ClusterMaxShiftDist=0.154489;ClusterMaxSizeDiff=0.146138;ClusterMaxEditDist=0.306916;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=713;DistBack=4480;DistForward=228;DistMin=228;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=908;REFWIDENED=20:62202472-62203379;PctSeqSimilarity=0.9846;PctSizeSimilarity=0.9958;PctRecOverlap=0.0418;SizeDiff=-3;StartDistance=-685;EndDistance=-685;GTMatch=0;TruScore=67;MatchId=3281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:88:1/1:4:25:1:14:./.:0:1:0:1:1/1:0:15:./.:1:17:.:.:.
chr20	62456471	HG4_PB_assemblyticsfalcon_15618	T	TCCCCCATCTTCCCATCACTGCACCCGTCTCACCGTCATCAAACCCTCCCTCCCCCATCTTCCCATCACTGCACCCCCATCTCACCATCATCAAACCCTTCC	10	PASS	ClusterIDs=HG3_PB_pbsv_18623:HG4_PB_assemblyticsfalcon_15618:HG4_PB_SVrefine2Falcon1Dovetail_11788:HG3_PB_HySA_28196:HG2_PB_SVrefine2PBcRplusDovetail_6649:HG2_PB_SVrefine2Falcon2Bionano_9367:HG2_PB_pbsv_18941:HG3_PB_assemblyticsfalcon_15842:HG3_PB_SVrefine2Falcon1Dovetail_11766;NumClusterSVs=9;ExactMatchIDs=HG4_PB_assemblyticsfalcon_15618;NumExactMatchSVs=1;ClusterMaxShiftDist=0.16;ClusterMaxSizeDiff=0.16;ClusterMaxEditDist=0.281407;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=101;DistBack=161;DistForward=10746;DistMin=161;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=457;REFWIDENED=20:62456015-62456471;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.9712;PctRecOverlap=0;SizeDiff=-3;StartDistance=336;EndDistance=336;GTMatch=0;TruScore=65;MatchId=3284.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:26:0|1:13:3:0:19:./.:4:5:4:1:./.:1:0:./.:.:.:.:.:.
chr20	62763178	HG2_PB_SVrefine2Falcon1plusDovetail_7187	C	CCTGGCCTCTCTCATGTCCTATGAGACCCCCTCACTGTCCACTCTCATGGCCTGTAGAGACCCCCTCACTGTCAACTCTCATGTCCTATAGAGACCCCTCACTGTCAACTCTCATGCCTATGAGACCCCCTCACTGTCCACTCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGCCCCCTCACTGTCCACCCTCATGGCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACTCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCTCATGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCTCACTGTCCACTCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCTCATGGCCTGTAGAGACCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACTCTCGTGTCCTATGAGACCCCCTCACTGTCCACCCTCGTGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGCCTGTAGAGACCCCTCACTGTCCACCCTCGTGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACTCTCATGTCCTATGAGACCCCCTCACTGTCCACTCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCGTGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCTCACTGTCCACCCTCATGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7187:HG3_PB_SVrefine2Falcon1Dovetail_11783:HG2_PB_SVrefine2PBcRplusDovetail_6662:HG2_PB_SVrefine2Falcon2Bionano_9380;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7187;NumExactMatchSVs=1;ClusterMaxShiftDist=0.038572;ClusterMaxSizeDiff=0.038572;ClusterMaxEditDist=0.0763233;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=1231;DistBack=383;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=2100;REFWIDENED=20:62763179-62765278;PctSeqSimilarity=0.9515;PctSizeSimilarity=0.931;PctRecOverlap=0.4509;SizeDiff=85;StartDistance=-634;EndDistance=-634;GTMatch=1;TruScore=77;MatchId=3289.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:0:12:1:16:./.:0:1:2:1:./.:4:0:0/1:3:7:.:.:.
chr21	16403119	HG2_PB_SVrefine2PB10Xhap12_13900	A	AGATCACGACATTCCCTTTCTATGTGTATACACTCTGGAAGGCGGTTGGAGGATCACTACCTTCCCCTTCTATGTGTGTACACTCTGGAAGGCGCTCGGAGGATCACCACATTCCCTTTCTATGTGTGTACACTCTGGAAGGCGCTCGGAGGATCACCACATTCCCTTTCTATGTGTATACACTCTGGAAGGCGCTCGGAG	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9568:HG4_PB_SVrefine2Falcon1Dovetail_11852:HG2_PB_HySA_34296:HG2_Ill_breakscan11_4932:HG2_PB_PB10Xdip_18756:HG2_PB_pbsv_19023:HG2_PB_SVrefine2PBcRplusDovetail_6714:HG4_PB_pbsv_18952:HG2_PB_SVrefine2PB10Xhap12_13900:HG2_PB_SVrefine2Falcon2Bionano_9392:HG2_PB_SVrefine2Falcon1plusDovetail_7246;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7246:HG2_PB_SVrefine2Falcon2Bionano_9392:HG2_PB_SVrefine2PB10Xhap12_13900:HG2_PB_SVrefine2PBcRplusDovetail_6714;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.339901;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=200;DistBack=121610;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1260;REFWIDENED=21:16403120-16404379;PctSeqSimilarity=0.9674;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-305;EndDistance=-305;GTMatch=0;TruScore=65;MatchId=3292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:79:1/1:1:6:0:6:1/1:0:7:0:7:1/1:0:9:./.:.:.:.:.:.
chr21	27395370	HG3_PB_HySA_28423	G	GGGGTGGAAGATGAAACTGACTTAAGTAAACCTGCAATGCCCTGTGGTCAGGGATGCCTGCTGGAACTCACACA	10	PASS	ClusterIDs=HG2_PB_PB10Xdip_18826:HG3_PB_HySA_28423:HG2_PB_HySA_34442:HG2_PB_pbsv_19101;NumClusterSVs=4;ExactMatchIDs=HG3_PB_HySA_28423;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0939597;ClusterMaxSizeDiff=0.0671141;ClusterMaxEditDist=0.214765;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=73;DistBack=116;DistForward=20725;DistMin=116;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=288;REFWIDENED=21:27395148-27395435;PctSeqSimilarity=0.9916;PctSizeSimilarity=0.9863;PctRecOverlap=0;SizeDiff=1;StartDistance=223;EndDistance=223;GTMatch=0;TruScore=65;MatchId=3324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:37:./.:17:10:4:22:./.:2:1:2:0:0/0:31:1:./.:.:.:.:.:.
chr21	32114178	HG2_PB_SVrefine2PB10Xhap12_13971	G	GAGAGCCGAATCCATATCCAGAGCCATATCCACAGCCATAGCCAGAGGCAGAGCCATATCCACAGCCATAGCCACAGCCAGTTCCATATCCAGAGCCATATTGACAGCCGGAGCCATATCTACAGCCAGAGCCATATCCACAACCATAGCCACAGCCAGTTCCATATCCACAGCCATAGCCAGAGCCAGAGCCATATCCACAACCATAGCCAGAGCCAGAGCCATATCCACAACCATAGCCACAGCCAGTTCCATATCCACAGCCATAGCCAGAGCCAGAGCCATATCCACAGCCATAGCCAGAGCCAGAGCCATATCCATAACCATAGCCACAGTCAGTTCCATATCCAGAGCCGTATTGACAGCCAGAGCCATATCCACAGCCATAGCCAGAGCCAGAGCCATATCCACAACCATAGCCAGAGCCATATCCACAGCCATAGCCAGAGCCAGAGCCATATCCATAACCATAGCCACAGCCAGTTCCATATCCAGAGCCGTATTGACAGCCAGAGCCATATCCACAGCCAGAGCCAGAGCCATATCCATAACCATAGCCACAGCCAGAGCCATATCCACAACCATAGCCACAGCCAGTTCCATATCCAGAGCCGTATTGACAGCCAGAGCCACATCCACAGCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7313:HG3_PB_HySA_28480:HG2_PB_pbsv_19125:HG3_PB_pbsv_18810:HG2_PB_HySA_34499:HG4_PB_pbsv_19057:HG4_PB_SVrefine2Falcon1Dovetail_11923:HG4_PB_SVrefine2PBcRDovetail_9633:HG3_PB_SVrefine2Falcon1Dovetail_11897:HG3_PB_SVrefine2PBcRDovetail_9397:HG2_PB_SVrefine2PBcRplusDovetail_6781:HG2_PB_SVrefine2PB10Xhap12_13971:HG2_PB_SVrefine2Falcon2Bionano_9453;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7313:HG2_PB_SVrefine2PBcRplusDovetail_6781:HG2_PB_SVrefine2PB10Xhap12_13971:HG2_PB_SVrefine2Falcon2Bionano_9453;NumExactMatchSVs=4;ClusterMaxShiftDist=0.151261;ClusterMaxSizeDiff=0.148205;ClusterMaxEditDist=0.373946;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=642;DistBack=39307;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=737;REFWIDENED=21:32114179-32114915;PctSeqSimilarity=0.9485;PctSizeSimilarity=0.9386;PctRecOverlap=0.1401;SizeDiff=-42;StartDistance=-568;EndDistance=-568;GTMatch=0;TruScore=67;MatchId=3335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:111:1/1:2:39:1:18:1/1:0:80:1:51:./.:0:1:0/1:9:55:.:.:.
chr21	43285307	HG2_PB_SVrefine2Falcon1plusDovetail_7365	C	CTGCCATGCCTGCTCACTCCTCAGTCCCCACTCCCCACTCCCCGGCTCACTCCTCACTCCCCTGCTCACTCCTCACTCCCCAGCCCTCT	20	PASS	ClusterIDs=HG2_PB_HySA_34676:HG2_PB_SVrefine2Falcon1plusDovetail_7365:HG4_PB_SVrefine2Falcon1Dovetail_11982:HG2_Ill_SVrefine2DISCOVARplusDovetail_7904:HG2_PB_pbsv_19211;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7365;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0561798;ClusterMaxSizeDiff=0.0224719;ClusterMaxEditDist=0.146067;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=88;DistBack=35;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=150;REFWIDENED=21:43285183-43285332;PctSeqSimilarity=0.9948;PctSizeSimilarity=0.9888;PctRecOverlap=0;SizeDiff=-1;StartDistance=103;EndDistance=103;GTMatch=0;TruScore=66;MatchId=3363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:28:./.:8:23:23:3:./.:1:1:0:10:./.:0:5:./.:.:.:.:.:.
chr21	44774832	HG4_Ill_SVrefine2DISCOVARDovetail_13308	T	TTGCAGCTGCACCCGAGACCACCCCCTCCCCACCACAGATGCACACGCACACGTACTGACATATTCACACACACATACTGGTGCAGCCC	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9468:HG2_PB_pbsv_19243:HG4_PB_HySA_27618:HG4_PB_pbsv_19177:HG2_PB_HySA_34729:HG3_Ill_SVrefine2DISCOVARDovetail_13503:HG4_PB_SVrefine2PBcRDovetail_9700:HG4_Ill_SVrefine2DISCOVARDovetail_13308;NumClusterSVs=8;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_13308:HG4_PB_SVrefine2PBcRDovetail_9700;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0662983;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.188889;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=88;DistBack=12603;DistForward=110;DistMin=110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=244;REFWIDENED=21:44774833-44775076;PctSeqSimilarity=0.9881;PctSizeSimilarity=0.9778;PctRecOverlap=0;SizeDiff=-2;StartDistance=-163;EndDistance=-163;GTMatch=0;TruScore=65;MatchId=3373.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:1|0:3:28:20:1:./.:8:0:6:2:0/1:40:8:./.:.:.:.:.:.
chr21	46575490	HG2_PB_SVrefine2Falcon2Bionano_9551	C	CCACCCATCCATCATCCATCCACTCACCCATCCATCCACCCATCTACCCATGCATCCATCATCCATCTCTCCATGCATCCATCATCCATCTCTCCATCTAGTCATCCATCTATCTGCGCATCTACCCATCACCCATCTATTCATCCATCCACCCACCCACCCACCCATCATCACCTATCATCCATCATCCATTCATCCATCCATCCACCCACCCACCCACCCATCATCACCCATTACCCATTATCCATCATCCATCCATCCATCCACCCACCCACCCATCATCCATTCATCCAACCATTCATCCACCCACCCACCCTCATCACCCATTACCCATCATCCATCATCCACCCACCCACCCATCATCCCCCATCATCCATCATCCAGCCATCCACCCACCCACCCACCATCACCCATTACCCATCATCCATCATCCACTCACCCACCCACCATCACCCATCATCCACCCACCCAACCACCCACCATCACCCATCATCCATTCATCCATCCATCTGCCCACCCACCCATCATCCATTCATCCATCCATCCATCCACCCATCATCACCTATCATCCATCATCCATTCATCCACCCATCCATCCACCTACCCATCATCACCCATCATCGTCATCCATCCATCCATCCACCCACCCACCCACCCATCATCACCCATCACCCATCATCTATCTATCCATCCATCCACCCATCCATCATTACCCATCATCCATCTATCCATGCACCCACCCACCATCACCCATCATCCACCCACCCAACCACCCACCAT	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9497:HG2_PB_PB10Xdip_19075:HG4_PB_pbsv_19229:HG3_PB_HySA_28727:HG2_PB_pbsv_19293:HG4_PB_SVrefine2PBcRDovetail_9722:HG3_PB_SVrefine2Falcon1Dovetail_12008:HG4_PB_SVrefine2Falcon1Dovetail_12026:HG2_PB_SVrefine2PBcRplusDovetail_6882:HG2_PB_SVrefine2PB10Xhap12_14099:HG2_PB_SVrefine2Falcon2Bionano_9551:HG2_PB_SVrefine2Falcon1plusDovetail_7413;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9551:HG2_PB_SVrefine2PB10Xhap12_14099:HG2_PB_SVrefine2PBcRplusDovetail_6882;NumExactMatchSVs=3;ClusterMaxShiftDist=0.100923;ClusterMaxSizeDiff=0.0923077;ClusterMaxEditDist=0.253538;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=779;DistBack=3253;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=721;REFWIDENED=21:46575491-46576211;PctSeqSimilarity=0.9632;PctSizeSimilarity=0.9873;PctRecOverlap=0.3004;SizeDiff=-10;StartDistance=-547;EndDistance=-547;GTMatch=0;TruScore=75;MatchId=3386.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:83:./.:0:0:0:0:./.:0:0:0:0:./.:0:0:0/1:6:24:.:883:.
chr21	46727520	HG2_PB_SVrefine2Falcon2Bionano_9553	C	CGTGCAAATACACATCAGGGACACACGTGCACAGACATGCTCCAGGAACATGAACGCATGTGCAAATACACACCAGGAACACACGTGCACAGACACACTCCAGGAATATGCATACTTGTGCAAATACACACCAGGAACACACGTGCACAGACACACTCCAGGAATATGCACGCATGTGCAAATACACACCAGAAACACACGTGCACAGACACACTCCAGGAATATGCATACTT	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12010:HG2_PB_SVrefine2PBcRplusDovetail_6884:HG2_PB_SVrefine2PB10Xhap12_14101:HG2_PB_SVrefine2Falcon2Bionano_9553:HG2_PB_SVrefine2Falcon1plusDovetail_7415;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7415:HG2_PB_SVrefine2Falcon2Bionano_9553:HG2_PB_SVrefine2PB10Xhap12_14101:HG2_PB_SVrefine2PBcRplusDovetail_6884;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00854701;ClusterMaxSizeDiff=0.00854701;ClusterMaxEditDist=0.00854701;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=232;DistBack=26831;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=557;REFWIDENED=21:46727521-46728077;PctSeqSimilarity=0.9715;PctSizeSimilarity=0.9612;PctRecOverlap=0;SizeDiff=9;StartDistance=-369;EndDistance=-369;GTMatch=0;TruScore=64;MatchId=3388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:40:./.:4:18:19:9:./.:3:2:3:0:./.:8:0:./.:.:.:.:.:.
chr21	46973548	HG2_PB_SVrefine2PB10Xhap12_14125	C	CCCCCCTCCTAGTCCCCCCGCGCCCCCTTCCCAGTCCCCCACACCCCCTCCCAATCCCCCACGCCCCCTCCCAGTCCCCCACGCCCCCTCCCAATCCCCCACACCCCCTCCCAATCCCCCACGCCCCCTCCCAATCCCCCACACCCCATCCCAGTCCCCCACGCCCCATCCCAGTCCCCCACACCCCCTCCCAATCCCCCACACCCCCTCCCAATCCCCCACACCCCCTCCCAGTCCCCCACACCCCCTCCCAGTCCCCCACACCCCCTCCCAGTCCTCCACGCCCCATCCCAGTCCCCCACGCCCCCTCCCAGTCCCCCACACCCCCTCCCAATCCCCCACACCCCCATCCCAGTCCCCCACGCCCCATCCCAGTCCCCCACACCCCATCCCAGTCCCCCACGCCCCCATCCCAGTCCCCCACACCCCCTCCCAATCCCCCACGCCCCCTCCCAGTCCCCCACA	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9570:HG2_PB_SVrefine2Falcon1plusDovetail_7435:HG2_PB_SVrefine2PBcRplusDovetail_6901:HG2_PB_SVrefine2PB10Xhap12_14125:HG3_PB_SVrefine2Falcon1Dovetail_12027;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14125;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0993228;ClusterMaxSizeDiff=0.0993228;ClusterMaxEditDist=0.114286;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=464;DistBack=-12;DistForward=-1;DistMin=-12;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEINS;BREAKSIMLENGTH=256;REFWIDENED=21:46973549-46973804;PctSeqSimilarity=0.9357;PctSizeSimilarity=0.9892;PctRecOverlap=0;SizeDiff=5;StartDistance=-579;EndDistance=-579;GTMatch=1;TruScore=64;MatchId=3396.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:3:15:1:22:1/1:0:14:2:24:./.:0:2:0/1:1:7:.:2368:.
chr21	47045076	HG4_PB_SVrefine2Falcon1Dovetail_12047	A	ACACACCAAGAGTGAGTGGAAATTCAGATTTCATATTGTCCCATGTCACACAAGGGTGAGTGGAAATTCAGATTTCATGTTGTCCCATGT	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7956:HG3_PB_HySA_28770:HG2_PB_PB10Xdip_19119:HG4_Ill_GATKHC_30098:HG4_Ill_250bpfermikitraw_24685:HG4_Ill_150bpfermikitraw_23735:HG3_Ill_GATKHC_30074:HG3_Ill_150bpfermikitraw_23617:HG2_Ill_GATKHC_30161:HG2_Ill_250bpfermikitraw_25061:HG2_Ill_150bpfermikitraw_23571:HG2_PB_HySA_34848:HG4_PB_pbsv_19267:HG4_PB_SVrefine2PBcRDovetail_9735:HG2_10X_SVrefine210Xhap12_13494:HG4_PB_SVrefine2Falcon1Dovetail_12047:HG3_PB_SVrefine2PBcRDovetail_9513:HG3_PB_SVrefine2Falcon1Dovetail_12030:HG3_Ill_SVrefine2DISCOVARDovetail_13540:HG2_PB_SVrefine2PBcRplusDovetail_6903:HG2_PB_SVrefine2PB10Xhap12_14128:HG2_PB_SVrefine2Falcon2Bionano_9571:HG2_PB_SVrefine2Falcon1plusDovetail_7437;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7956:HG4_PB_SVrefine2PBcRDovetail_9735:HG4_PB_SVrefine2Falcon1Dovetail_12047:HG3_PB_SVrefine2PBcRDovetail_9513:HG3_PB_SVrefine2Falcon1Dovetail_12030:HG3_Ill_SVrefine2DISCOVARDovetail_13540:HG2_PB_SVrefine2PBcRplusDovetail_6903:HG2_PB_SVrefine2PB10Xhap12_14128:HG2_PB_SVrefine2Falcon2Bionano_9571:HG2_PB_SVrefine2Falcon1plusDovetail_7437;NumExactMatchSVs=10;ClusterMaxShiftDist=0.12766;ClusterMaxSizeDiff=0.12766;ClusterMaxEditDist=0.309278;PBcalls=12;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=89;DistBack=2700;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=313;REFWIDENED=21:47045077-47045389;PctSeqSimilarity=0.9837;PctSizeSimilarity=0.9888;PctRecOverlap=0;SizeDiff=1;StartDistance=-186;EndDistance=-186;GTMatch=0;TruScore=65;MatchId=3399.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:1:11:0:7:./.:0:0:0:0:0/0:43:0:./.:.:.:.:.:.
chr21	47479159	HG2_PB_SVrefine2Falcon2Bionano_9590	T	TAGTGGCTTTGTCGATAGGCTGTGTAGACATGGATGCCCACCTGAGCCCATTGCTCAGTGTCTGTATGGACAGGTGGTGTGGACATGGAAGCTCGCCTGAGTCCGTCCCTCAGTGTGTGTGTGTGGACAGGTCGTGTGGACGTGGACGTTTGCCTGAGTGCGTCCCTCAGTGTCTGTGTGGACAGGTCGTGCGGTCATGGATGTTTGCCTGAGCCCATCCCTCAGTGTCTCTGAGGACAGGTCGTGTGGACATGGACATTTGCCTGAGTCTGTCCCTCAGTGTCTCTGTGGACAGGTCATGTGGATGTGGACATTTGCCTGAGTCCGTCCCTCAGTGTCTCTGTGGACAGGTCGTGTGGTCATGGATGTTTGCCTGAGTGCATCCCTCAGTGTCTGTGTGGACAGGTCATGCGGACGTGGATGTTTGCCTGAGCCCGTCCCTCAGTCTCTCTGTGGACAGGTCGTGTGGACGTGGATGTTCCCCTGAGCCCGTCCCTCAGTGTCTGTGTGGACAGGTCATGTGGACGTGGATGTTTGCCTGAGCCCGTCCCTCAGTGTCTCTGTGGACAGGTCTTCTGGACGTGGATGTTCCCCTGAGCCCGTCCCTC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7465:HG2_PB_pbsv_19364:HG3_PB_pbsv_19053:HG3_PB_SVrefine2Falcon1Dovetail_12055:HG2_PB_SVrefine2PBcRplusDovetail_6926:HG2_PB_SVrefine2Falcon2Bionano_9590;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9590:HG2_PB_SVrefine2PBcRplusDovetail_6926:HG3_PB_SVrefine2Falcon1Dovetail_12055;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0389927;ClusterMaxSizeDiff=0.037368;ClusterMaxEditDist=0.268293;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=607;DistBack=703;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1014;REFWIDENED=21:47479160-47480173;PctSeqSimilarity=0.9663;PctSizeSimilarity=0.9967;PctRecOverlap=0;SizeDiff=2;StartDistance=-670;EndDistance=-670;GTMatch=0;TruScore=65;MatchId=3406.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:41:0|1:25:1:1:23:./.:0:2:5:0:0/1:13:13:0/1:3:17:.:7598:.
chr21	47504902	HG2_PB_SVrefine2Falcon2Bionano_9591	T	TCCCCTGTGACTGAGGAGGAGCAGTGACACAGCCAGGGCACAGTGTGATTCCAGGACTCCCGGACCCCACCCCTGTGACCGAGGAGGAGCAGTGACACAGCCAGGACACAGTGAGACTCCAGGACTCCCCGACCCTGCCCCTGTGACAGAGGAGGAGCAGTGACACAGCCAGGACACGGTGTGACTCCAGGACCCTGCCCCTGTGACCGAGGAGGAGCAGTGACACAGCCAGGGCATAGTGTGACTCCAGGACCCTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9591:HG2_PB_PB10Xdip_19165:HG3_PB_SVrefine2Falcon1Dovetail_12056:HG2_PB_HySA_34913:HG3_PB_pbsv_19054:HG4_PB_HySA_27759:HG2_PB_pbsv_19365:HG4_PB_pbsv_19308:HG2_PB_SVrefine2Falcon1plusDovetail_7466:HG4_PB_SVrefine2Falcon1Dovetail_12067:HG4_PB_SVrefine2PBcRDovetail_9748:HG3_PB_SVrefine2PBcRDovetail_9530:HG2_PB_SVrefine2PBcRplusDovetail_6927:HG2_PB_SVrefine2PB10Xhap12_14157;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9591:HG4_PB_SVrefine2PBcRDovetail_9748:HG3_PB_SVrefine2PBcRDovetail_9530:HG2_PB_SVrefine2PBcRplusDovetail_6927:HG2_PB_SVrefine2PB10Xhap12_14157;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0787402;ClusterMaxSizeDiff=0.0708661;ClusterMaxEditDist=0.317829;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=256;DistBack=15779;DistForward=438;DistMin=438;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=849;REFWIDENED=21:47504903-47505751;PctSeqSimilarity=0.9803;PctSizeSimilarity=0.9648;PctRecOverlap=0;SizeDiff=9;StartDistance=-434;EndDistance=-434;GTMatch=0;TruScore=64;MatchId=3407.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:87:1/1:0:17:0:11:./.:1:0:0:0:./.:1:0:./.:.:.:.:7598:.
chr22	17584529	HG2_PB_SVrefine2PB10Xhap12_14184	A	AGGAGTGAGGAGTGTGCACAGGTGAAGAGTGGTGTGGACGGGAGTGGGGAGTGTGCACAGGTGGAGAGAGTGGTGTGGACGGGAGTGGGGAGCGTGCACAGGTGGAGAGTGTGGTGTGTCTGGGAGTGGGGAGTGTGCACAGGTGGAGAGTGGTGTGGACGGGAGTGGGGAGCGTGCACAGGTGGAGAGAGTGGTGTGGACGGGAGTGGGGAACGTGCACAGGTGGAGAGAGTGGTGTGGCTG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7487:HG2_PB_SVrefine2Falcon1plusDovetail_7488:HG2_PB_pbsv_19412:HG2_PB_PB10Xdip_19329:HG2_PB_HySA_34961:HG2_PB_pbsv_19411:HG2_PB_SVrefine2PBcRplusDovetail_6950:HG2_PB_SVrefine2PB10Xhap12_14184:HG2_PB_SVrefine2Falcon2Bionano_9607;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7487:HG2_PB_SVrefine2PBcRplusDovetail_6950:HG2_PB_SVrefine2PB10Xhap12_14184:HG2_PB_SVrefine2Falcon2Bionano_9607;NumExactMatchSVs=4;ClusterMaxShiftDist=0.084;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.328185;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=242;DistBack=8938;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=790;REFWIDENED=22:17584530-17585319;PctSeqSimilarity=0.9748;PctSizeSimilarity=0.9878;PctRecOverlap=0;SizeDiff=-3;StartDistance=-312;EndDistance=-312;GTMatch=0;TruScore=65;MatchId=3419.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:67:1/1:3:15:0:14:./.:0:1:3:3:./.:3:0:./.:.:.:.:.:.
chr22	18588640	HG2_PB_SVrefine2Falcon2Bionano_9620	G	GGAGACCCAGAAGAGCTGAAGATGTGGTTCCAGTCTGTCTGAAGCCTGAGACCCAGGAGAGCTGAAGACATAGTTCCAGTCTGAGTCTGAAGCCTGGGACCCATGAGAGCTGAAGACGTGGTCCCAGTCTGAGTCTGAAGCCTGAGACCCAGGAGAGCTGAAGACGTGGTTCCAGTCTGAGTCTGAAGCCTGAGATCCAGGAGAGCTAAGGACATGGTTCTAGTCTGAGTCTGAAGCCTGAGACCCAGGAGAGCTGATGGTGTGGTTCCAGTCTGAGTCTGAAGCCTGAGACCCAGGAGAGCTGAATACGTAGTTCCAGTCTGAGTCTGAAGCCTGAGTTCCAGGAGAGCTGAGGACATGGTTCCAGTCTGAATCTGAAGCCC	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7502:HG4_PB_pbsv_19371:HG3_PB_pbsv_19113:HG2_PB_pbsv_19430:HG4_PB_SVrefine2PBcRDovetail_9776:HG3_PB_SVrefine2PBcRDovetail_9563:HG3_PB_SVrefine2Falcon1Dovetail_12093:HG2_PB_SVrefine2PBcRplusDovetail_6963:HG2_PB_SVrefine2PB10Xhap12_14202:HG2_PB_SVrefine2Falcon2Bionano_9620:HG4_PB_SVrefine2Falcon1Dovetail_12097;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9620:HG2_PB_SVrefine2PB10Xhap12_14202:HG2_PB_SVrefine2PBcRplusDovetail_6963:HG3_PB_SVrefine2Falcon1Dovetail_12093:HG3_PB_SVrefine2PBcRDovetail_9563:HG4_PB_SVrefine2PBcRDovetail_9776;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0734177;ClusterMaxSizeDiff=0.0708861;ClusterMaxEditDist=0.18677;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=382;DistBack=45613;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=1252;REFWIDENED=22:18588641-18589892;PctSeqSimilarity=0.9742;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-548;EndDistance=-548;GTMatch=0;TruScore=65;MatchId=3429.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:121:1/1:2:28:1:24:./.:0:1:3:1:./.:1:0:0/1:2:8:.:.:.
chr22	25741367	HG2_PB_SVrefine2PBcRplusDovetail_7003	A	AGTGACCCATCTGCCTCAGCCTCCCACAGTGCTGGGATTACAGGGGTGAGCCCCTGCTCTCAGCCTCCCACAGTGCTGGGATTACTGGGGTGAGCCCCTGCTCTCAGCCTCCCACAGTGCTGGGATTACAGGGGTGAGCCGCTGCTCTCAGCCTCCCACAGTGCTGGGATTACAGGG	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7554:HG4_PB_HySA_27943:HG3_PB_HySA_28975:HG2_PB_pbsv_19494:HG3_PB_pbsv_19170:HG2_PB_HySA_35112:HG4_PB_SVrefine2PBcRDovetail_9799:HG4_PB_pbsv_19423:HG4_PB_SVrefine2Falcon1Dovetail_12123:HG3_PB_SVrefine2PBcRDovetail_9588:HG3_PB_SVrefine2Falcon1Dovetail_12120:HG2_PB_SVrefine2PBcRplusDovetail_7003:HG2_PB_SVrefine2PB10Xhap12_14246:HG2_PB_SVrefine2Falcon2Bionano_9650;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7554:HG4_PB_SVrefine2Falcon1Dovetail_12123:HG3_PB_SVrefine2PBcRDovetail_9588:HG3_PB_SVrefine2Falcon1Dovetail_12120:HG2_PB_SVrefine2PBcRplusDovetail_7003:HG2_PB_SVrefine2PB10Xhap12_14246:HG2_PB_SVrefine2Falcon2Bionano_9650;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0501393;ClusterMaxSizeDiff=0.0278552;ClusterMaxEditDist=0.298343;PBcalls=14;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=176;DistBack=36443;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=663;REFWIDENED=22:25741368-25742030;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-491;EndDistance=-491;GTMatch=0;TruScore=66;MatchId=3442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:0:11:1:11:./.:1:0:1:0:./.:7:0:./.:.:.:.:.:.
chr22	28485965	HG3_PB_HySA_29009	G	GTGGGGAGGGATAGCATTAGGAGATATACTAATGCTTAATGACGAGTTACTGGGTGCAGCACACCAGCATGGCACGTGTATACATATGTAACTAACCTGCACGTTGTGCACATATACCCTAAAACTTAAAGTATAATAATAATAAATAAAATAAAATAAATAAAAAATAAAAAAATAAAAAAAATAAAGGTTTTCAAATGTTTAAAAAAAAAGAAAATGTGGCATGTATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCCTGTCCTTTGTAGGGACATGGATGAACTGGAAACTATCATTCTCAGCAAAGTATCGCAAGGACAAAAAACCACATAACCGCATGTTCTCACTCACAGTGGGAATTGAACAAATGAGAACACATGGACACAGAAAGGGGAACATCACACACCGGGGACTGTTGTGGGGTGGTGGGA	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_12132:HG3_PB_HySA_29009:HG3_PB_pbsv_19181:HG2_PB_HySA_35153:HG3_PB_SVrefine2PBcRDovetail_9595:HG3_PB_SVrefine2Falcon1Dovetail_12127:HG2_PB_SVrefine2PBcRplusDovetail_7010;NumClusterSVs=7;ExactMatchIDs=HG3_PB_HySA_29009;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0548246;ClusterMaxSizeDiff=0.0526316;ClusterMaxEditDist=0.133772;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=444;DistBack=244;DistForward=11804;DistMin=244;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=836;REFWIDENED=22:28485280-28486115;PctSeqSimilarity=0.9918;PctSizeSimilarity=0.9867;PctRecOverlap=0;SizeDiff=-6;StartDistance=531;EndDistance=531;GTMatch=0;TruScore=65;MatchId=3447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:51:./.:12:8:20:18:./.:31:0:20:4:0/0:48:3:0/1:7:4:.:.:.
chr22	38183087	HG4_PB_SVrefine2Falcon1Dovetail_12183	G	CCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCTCTGCCCGGCCAGC	10	PASS	ClusterIDs=HG2_PB_pbsv_19573:HG4_PB_SVrefine2Falcon1Dovetail_12183:HG4_PB_assemblyticsfalcon_16444:HG2_PB_assemblyticsPBcR_16266:HG3_PB_SVrefine2Falcon1Dovetail_12176:HG3_PB_pbsv_19244:HG3_PB_SVrefine2PBcRDovetail_9638:HG2_PB_SVrefine2PBcRplusDovetail_7057:HG2_PB_SVrefine2PB10Xhap12_14312:HG2_PB_PB10Xdip_19521;NumClusterSVs=10;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_12183;NumExactMatchSVs=1;ClusterMaxShiftDist=0.14346;ClusterMaxSizeDiff=0.134454;ClusterMaxEditDist=0.253165;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=124;DistBack=172;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=INS;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=450;REFWIDENED=22:38182637-38183086;PctSeqSimilarity=0.9804;PctSizeSimilarity=0.992;PctRecOverlap=0;SizeDiff=-1;StartDistance=130;EndDistance=130;GTMatch=0;TruScore=65;MatchId=3471.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:11:25:./.:9:3:1:19:0/0:19:0:8:0:0/0:29:1:./.:.:.:.:.:.
chr22	50643493	HG2_Ill_SVrefine2DISCOVARplusDovetail_8236	G	GTGGGTCCCAGGGGCTGGAGGGAGTAGAGGAATCGGGAGCCAGTGTTCGATGGGGACAAAGTTTCAGTTTC	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8236:HG3_Ill_250bpfermikitraw_24847:HG2_Ill_250bpfermikitraw_25582:HG2_PB_HySA_35631:HG2_PB_pbsv_19787:HG2_PB_SVrefine2Falcon2Bionano_9828:HG3_PB_pbsv_19467;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8236:HG2_PB_SVrefine2Falcon2Bionano_9828;NumExactMatchSVs=2;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.106667;ClusterMaxEditDist=0.266667;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=70;DistBack=11093;DistForward=7618;DistMin=7618;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=INS;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=140;REFWIDENED=22:50643494-50643633;PctSeqSimilarity=0.9976;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-136;EndDistance=-136;GTMatch=0;TruScore=66;MatchId=3531.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:31:0|1:33:1:0:27:./.:5:5:4:0:0/1:21:9:./.:.:.:.:.:.
chr1	1598413	HG3_PB_SVrefine2Falcon1Dovetail_29	ACACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTCAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCAAACCAGAGAAATCCAGCTCTGGGTGACAGAGCAAGACTCTGTTTCGGGAAAAATAAAATACATAGGCAGGGCGCGGTGGCT	A	20	PASS	ClusterIDs=HG2_PB_HySA_65:HG4_PB_HySA_53:HG3_PB_pbsv_33:HG4_PB_pbsv_35:HG2_PB_pbsv_32:HG2_PB_HySA_66:HG4_Ill_MetaSV_8:HG3_Ill_MetaSV_8:HG2_Ill_MetaSV_5:HG4_Ill_GATKHCSBGrefine_17:HG4_10X_allpass_4:HG3_PB_SVrefine2Falcon1Dovetail_29:HG3_Ill_scalpel_19:HG3_Ill_manta_2:HG3_Ill_SVrefine2DISCOVARDovetail_9:HG3_Ill_GATKHCSBGrefine_10:HG3_10X_allpass_2:HG2_PB_SVrefine2Falcon1plusDovetail_32:HG2_Ill_scalpel_15:HG2_Ill_manta_2:HG2_Ill_GATKHCSBGrefine_11:HG4_PB_SVrefine2PBcRDovetail_15:HG4_PB_SVrefine2Falcon1Dovetail_28:HG3_PB_SVrefine2PBcRDovetail_23:HG2_PB_SVrefine2PBcRplusDovetail_27:HG2_PB_SVrefine2PB10Xhap12_32:HG2_PB_SVrefine2Falcon2Bionano_21:HG2_Ill_SVrefine2DISCOVARplusDovetail_16;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11:HG2_Ill_manta_2:HG2_Ill_scalpel_15:HG2_PB_SVrefine2Falcon1plusDovetail_32:HG3_10X_allpass_2:HG3_Ill_GATKHCSBGrefine_10:HG3_Ill_SVrefine2DISCOVARDovetail_9:HG3_Ill_manta_2:HG3_Ill_scalpel_19:HG3_PB_SVrefine2Falcon1Dovetail_29:HG4_10X_allpass_4:HG4_Ill_GATKHCSBGrefine_17;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0179104;ClusterMaxSizeDiff=0.0179104;ClusterMaxEditDist=0.0299401;PBcalls=14;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-167;DistBack=3572;DistForward=-101;DistMin=-101;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=54;REFWIDENED=1:1598407-1598627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:0:22:1:18:1/1:0:16:1:18:1/1:0:32:./.:.:.:.:.:.
chr1	2041460	HG2_PB_SVrefine2PBcRplusDovetail_33	TCGGGGCCCTCCCTGGGGGCAGCCAAGGACCTAAAACCAATGGGTCCCAACCAAGAGGATCCCAGAGGTGAGACACAGAACGGCCAGGGCTGAATC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_25:HG2_PB_assemblyticsfalcon_65:HG2_PB_SVrefine2Falcon1plusDovetail_41:HG2_PB_pbsv_44:HG4_PB_pbsv_48:HG3_PB_pbsv_48:HG4_PB_SVrefine2PBcRDovetail_22:HG4_PB_SVrefine2Falcon1Dovetail_34:HG4_Ill_150bpfermikitraw_23:HG3_PB_SVrefine2PBcRDovetail_32:HG3_PB_SVrefine2Falcon1Dovetail_37:HG3_Ill_SVrefine2DISCOVARDovetail_19:HG2_PB_SVrefine2PBcRplusDovetail_33:HG2_PB_SVrefine2PB10Xhap12_39:HG2_Ill_SVrefine2DISCOVARplusDovetail_22;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_25:HG4_PB_SVrefine2Falcon1Dovetail_34:HG4_Ill_150bpfermikitraw_23:HG3_PB_SVrefine2PBcRDovetail_32:HG3_PB_SVrefine2Falcon1Dovetail_37:HG3_Ill_SVrefine2DISCOVARDovetail_19:HG2_PB_SVrefine2PBcRplusDovetail_33:HG2_PB_SVrefine2PB10Xhap12_39:HG2_Ill_SVrefine2DISCOVARplusDovetail_22;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0314136;ClusterMaxSizeDiff=0.0314136;ClusterMaxEditDist=0.0425532;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-95;DistBack=3165;DistForward=-96;DistMin=-96;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=190;REFWIDENED=1:2041461-2041745;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=5.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:32:0|1:27:1:4:31:./.:1:0:0:1:0/1:21:7:./.:.:.:.:.:.
chr1	2073761	HG2_Ill_scalpel_22	CAGCAGCCGAAGCGCCTCCTTTCAATCCAGGGTCCACACATCCAGCAGCCGAAGCGCCCTCCTTTCAATCCAGGGTCCAGGCATCT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_68:HG3_PB_assemblyticsfalcon_60:HG4_PB_HySA_68:HG4_PB_pbsv_53:HG2_PB_pbsv_48:HG4_Ill_svaba_48:HG4_Ill_scalpel_20:HG4_Ill_GATKHCSBGrefine_27:HG4_Ill_150bpfermikitraw_25:HG3_Ill_svaba_46:HG2_Ill_svaba_40:HG2_Ill_scalpel_22:HG2_Ill_GATKHCSBGrefine_18;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_18:HG2_Ill_scalpel_22:HG2_Ill_svaba_40:HG3_Ill_svaba_46:HG4_Ill_150bpfermikitraw_25:HG4_Ill_GATKHCSBGrefine_27:HG4_Ill_scalpel_20:HG4_Ill_svaba_48;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0232558;ClusterMaxSizeDiff=0.0232558;ClusterMaxEditDist=0.0697674;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-85;DistBack=165;DistForward=-6;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=549;REFWIDENED=1:2073302-2073935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=6.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:./.:22:14:17:10:./.:0:3:8:0:0/1:10:6:./.:.:.:.:.:.
chr1	2193469	HG2_PB_assemblyticsfalcon_71	TCTCCTGATCTCCTGATCTGGAAGGCGTGGAATCAGAGTTTGGGTGGGAGTGGTGGGAGTGGACACCCTCG	T	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_71:HG4_PB_pbsv_54:HG2_PB_pbsv_51:HG2_PB_assemblyticsPBcR_53:HG4_PB_assemblyticsfalcon_57;NumClusterSVs=5;ExactMatchIDs=HG2_PB_assemblyticsfalcon_71:HG4_PB_assemblyticsfalcon_57;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0141844;ClusterMaxSizeDiff=0.0141844;ClusterMaxEditDist=0.0283688;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-70;DistBack=77;DistForward=7695;DistMin=77;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=732;REFWIDENED=1:2193209-2194010;PctSeqSimilarity=0.9924;PctSizeSimilarity=1;PctRecOverlap=0.7887;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=92;MatchId=7.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:37:1|0:6:27:19:3:./.:2:3:5:0:./.:2:0:./.:.:.:.:.:.
chr1	2866089	HG2_PB_SVrefine2PB10Xhap12_60	TGTACGGCAGGGGTGGTGCTGGCAGCTCTGTGGCGGTGCCGGGCTGCAGAGTACGGCAGGGGTGGTGCTGGCAGCTCTGTGGCGGTGCCGGGCTGCTGGGTACGGCAGGGGTGGTGCTGGCAGCTCTGTGGCGGTGCCGGGCTGCAGG	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_62:HG2_PB_HySA_113:HG3_PB_pbsv_68:HG4_PB_pbsv_71:HG2_PB_pbsv_68:HG4_PB_SVrefine2PBcRDovetail_37:HG2_PB_SVrefine2PBcRplusDovetail_46:HG2_PB_SVrefine2PB10Xhap12_60:HG2_PB_SVrefine2Falcon2Bionano_43;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_62:HG4_PB_SVrefine2PBcRDovetail_37:HG2_PB_SVrefine2PBcRplusDovetail_46:HG2_PB_SVrefine2PB10Xhap12_60:HG2_PB_SVrefine2Falcon2Bionano_43;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0135135;ClusterMaxSizeDiff=0.0135135;ClusterMaxEditDist=0.0272109;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-147;DistBack=4689;DistForward=-148;DistMin=-148;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=393;REFWIDENED=1:2866090-2866629;PctSeqSimilarity=0.98;PctSizeSimilarity=1;PctRecOverlap=0.6689;SizeDiff=0;StartDistance=-49;EndDistance=-49;GTMatch=0;TruScore=88;MatchId=10.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:1:14:0:13:./.:3:1:2:1:./.:6:0:./.:.:.:.:.:.
chr1	3242594	HG2_Ill_150bpfermikitraw_50	TCCTTGGCCATCCTCGGCCCTCTTGGCCCCCCTTGGCCATCCTCGACCATCCTTGGCCCC	T	20	PASS	ClusterIDs=HG4_PB_HySA_109:HG2_PB_HySA_147:HG2_PB_pbsv_86:HG4_PB_pbsv_89:HG4_Ill_svaba_72:HG4_Ill_Krunchall_50:HG4_Ill_GATKHC_90:HG4_Ill_GATKHCSBGrefine_51:HG4_Ill_250bpfermikitraw_59:HG4_Ill_150bpfermikitraw_45:HG2_Ill_svaba_67:HG2_Ill_GATKHC_85:HG2_Ill_GATKHCSBGrefine_36:HG2_Ill_150bpfermikitraw_50:HG2_PB_assemblyticsPBcR_85;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_50:HG2_Ill_GATKHCSBGrefine_36:HG2_Ill_GATKHC_85:HG2_Ill_svaba_67:HG4_Ill_150bpfermikitraw_45:HG4_Ill_250bpfermikitraw_59:HG4_Ill_GATKHCSBGrefine_51:HG4_Ill_GATKHC_90:HG4_Ill_Krunchall_50:HG4_Ill_svaba_72:HG4_PB_pbsv_89;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0495868;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.130081;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=-28;DistForward=19639;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:3242593-3242669;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=11.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:36:0|1:29:2:4:29:1|0:0:7:14:1:0/1:10:4:./.:.:.:.:.:.
chr1	3508320	HG2_Ill_GATKHCSBGrefine_39	TTGGGGGCTGCTACCAAGGTCTCGTAGCTCACAAGGGACCGGATGGGGGCACCAGCGAGGGGGCTGG	T	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_39:HG4_PB_HySA_122:HG4_PB_pbsv_99:HG4_PB_assemblyticsfalcon_105:HG3_PB_assemblyticsfalcon_110:HG2_PB_pbsv_94:HG3_PB_pbsv_98:HG3_PB_HySA_116:HG2_PB_HySA_155:HG4_Ill_GATKHCSBGrefine_55:HG4_Ill_250bpfermikitraw_64:HG3_Ill_GATKHCSBGrefine_36;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_39:HG4_Ill_GATKHCSBGrefine_55:HG4_Ill_250bpfermikitraw_64:HG3_Ill_GATKHCSBGrefine_36;NumExactMatchSVs=4;ClusterMaxShiftDist=0.10219;ClusterMaxSizeDiff=0.10219;ClusterMaxEditDist=0.10219;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=-41;DistForward=4600;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=266;REFWIDENED=1:3508160-3508491;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=12.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:7:31:1/1:4:16:1:12:./.:0:2:0:3:1/1:0:14:./.:.:.:.:2484:.
chr1	3591553	HG2_PB_SVrefine2PB10Xhap12_83	GGTCTCCTCCCACAATGGCCCAGGTGTCTCCTCCCACAATGGCCCAGGTGTCTCCTCCCACAATGGCCCAGGTGTCTCCTCCCACAATGGCCCAGGTGTCTCCTCCCACAATGGCCCAGGTGTCTCCTCCCACAATGGCCCAGGTGTCTCCTCCCACAATGGCCCAGGTGTCTCCTCCCACAATGGCCCAGGT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_50:HG4_PB_assemblyticsfalcon_109:HG2_PB_HySA_163:HG4_PB_SVrefine2Falcon1Dovetail_70:HG3_PB_assemblyticsfalcon_116:HG3_PB_SVrefine2Falcon1Dovetail_77:HG4_PB_pbsv_103:HG2_PB_pbsv_98:HG3_PB_pbsv_102:HG3_Ill_SVrefine2DISCOVARDovetail_35:HG2_10X_SVrefine210Xhap12_60:HG4_PB_SVrefine2PBcRDovetail_50:HG4_Ill_SVrefine2DISCOVARDovetail_37:HG3_PB_SVrefine2PBcRDovetail_63:HG2_PB_SVrefine2PBcRplusDovetail_68:HG2_PB_SVrefine2PB10Xhap12_83:HG2_PB_SVrefine2Falcon2Bionano_65:HG2_PB_SVrefine2Falcon1plusDovetail_84;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_50:HG4_PB_SVrefine2PBcRDovetail_50:HG4_Ill_SVrefine2DISCOVARDovetail_37:HG3_PB_SVrefine2PBcRDovetail_63:HG2_PB_SVrefine2PBcRplusDovetail_68:HG2_PB_SVrefine2PB10Xhap12_83:HG2_PB_SVrefine2Falcon2Bionano_65:HG2_PB_SVrefine2Falcon1plusDovetail_84;NumExactMatchSVs=8;ClusterMaxShiftDist=0.319475;ClusterMaxSizeDiff=0.319475;ClusterMaxEditDist=0.319475;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-192;DistBack=-25;DistForward=-186;DistMin=-186;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=173;REFWIDENED=1:3591578-3591918;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=13.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:31:1/1:2:14:1:16:./.:0:2:0:1:./.:0:5:./.:.:.:.:.:.
chr1	3598418	HG3_PB_assemblyticsfalcon_118	GTAACAGACCACAGGCCTCACACACTTGTTCCGGCCCAAGCATCCCCCAGGCCAAACCTAGACACAGTGGATCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_62:HG4_PB_assemblyticsfalcon_111:HG4_PB_HySA_134:HG4_PB_pbsv_104:HG2_PB_pbsv_99:HG4_Ill_svaba_81:HG4_Ill_Krunchall_59:HG4_Ill_GATKHC_101:HG4_Ill_GATKHCSBGrefine_58:HG4_Ill_250bpfermikitraw_69:HG4_Ill_150bpfermikitraw_55:HG3_PB_assemblyticsfalcon_118:HG2_Ill_svaba_76:HG2_Ill_scalpel_45:HG2_Ill_manta_13:HG2_Ill_Krunchall_58:HG2_Ill_GATKHC_95:HG2_Ill_GATKHCSBGrefine_41:HG2_Ill_250bpfermikitraw_75:HG4_PB_SVrefine2PBcRDovetail_51:HG4_Ill_SVrefine2DISCOVARDovetail_38:HG2_PB_SVrefine2PBcRplusDovetail_69:HG2_PB_SVrefine2PB10Xhap12_84:HG2_Ill_SVrefine2DISCOVARplusDovetail_51;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_75:HG2_Ill_GATKHCSBGrefine_41:HG2_Ill_GATKHC_95:HG2_Ill_Krunchall_58:HG2_Ill_manta_13:HG2_Ill_scalpel_45:HG2_Ill_svaba_76:HG3_PB_assemblyticsfalcon_118:HG4_Ill_150bpfermikitraw_55:HG4_Ill_250bpfermikitraw_69:HG4_Ill_GATKHCSBGrefine_58:HG4_Ill_GATKHC_101:HG4_Ill_Krunchall_59:HG4_Ill_svaba_81;NumExactMatchSVs=14;ClusterMaxShiftDist=0.027027;ClusterMaxSizeDiff=0.027027;ClusterMaxEditDist=0.0675676;PBcalls=8;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-73;DistBack=2008;DistForward=11736;DistMin=2008;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=78;REFWIDENED=1:3598384-3598534;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=14.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:20:./.:12:18:12:1:1|0:0:9:9:0:0/1:17:17:./.:.:.:.:.:.
chr1	3656048	HG4_Ill_150bpfermikitraw_57	ATCTAACCCACACAATCAACCCAGCTGATGACCTCTATCTAACCCGCAGAATCAACCCAGCTGATGACCTCTG	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_43:HG2_PB_assemblyticsPBcR_101:HG2_PB_pbsv_102:HG4_PB_pbsv_105:HG4_Ill_GATKHC_105:HG4_Ill_GATKHCSBGrefine_62:HG4_Ill_150bpfermikitraw_57:HG2_PB_assemblyticsfalcon_125:HG2_Ill_breakscan11_12;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_43:HG4_Ill_GATKHC_105:HG4_Ill_GATKHCSBGrefine_62:HG4_Ill_150bpfermikitraw_57:HG2_PB_assemblyticsfalcon_125:HG2_Ill_breakscan11_12;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0138889;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0277778;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-72;DistBack=-302;DistForward=327;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=546;REFWIDENED=1:3655778-3656395;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=15.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:0|1:25:0:2:20:1|0:0:9:17:1:0/1:8:9:./.:.:.:.:.:.
chr1	3716941	HG3_Ill_SVrefine2DISCOVARDovetail_38	GTCTGTGGTGCCACCTGGGTCTCTGTGCCATCTGGACCTAACGCAGGTAACTCTGTGGTGCCGCCTGGGTCTCTGTGCCATCTCGACCTAACGCAGGTCGCTCTGTGGTGCCGCCTGGGTCTCTGTGCCATCTGGACCTAACACAGGTCAC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_65:HG3_Ill_Krunchall_55:HG2_PB_SVrefine2Falcon2Bionano_68:HG2_PB_PB10Xdip_2138:HG3_Ill_GATKHC_101:HG3_Ill_GATKHCSBGrefine_39:HG2_Ill_GATKHC_99:HG2_Ill_GATKHCSBGrefine_45:HG3_PB_pbsv_105:HG2_PB_pbsv_104:HG3_Ill_SVrefine2DISCOVARDovetail_38:HG2_PB_SVrefine2PB10Xhap12_87:HG2_Ill_SVrefine2DISCOVARplusDovetail_53;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_65:HG3_Ill_SVrefine2DISCOVARDovetail_38:HG2_PB_SVrefine2PB10Xhap12_87:HG2_Ill_SVrefine2DISCOVARplusDovetail_53;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00666667;ClusterMaxSizeDiff=0.00664452;ClusterMaxEditDist=0.0398671;PBcalls=5;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-150;DistBack=2684;DistForward=-88;DistMin=-88;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=121;REFWIDENED=1:3716942-3717212;PctSeqSimilarity=0.9758;PctSizeSimilarity=1;PctRecOverlap=0.596;SizeDiff=0;StartDistance=-61;EndDistance=-61;GTMatch=0;TruScore=85;MatchId=16.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:16:0|1:20:5:0:6:./.:15:0:2:6:0/1:36:15:./.:.:.:.:.:.
chr1	5350910	HG2_Ill_SVrefine2DISCOVARplusDovetail_67	GATGGTGGATGGAAAGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATAAATGAGTGGATGGATGAATGAAGGAGTGGATGGATGTATGGTGGATGAATGGTGGATGGGTAGTGGACGAATGGATAGATAGATAAATGAATAGATTGATAGCTGGATGATGAATGGATGGATAGATAGATGAACCAATTCTAGTATTATTAGCTCTTATGTAAAGCAGTAAGGAATAGAAAAGAGAAAGGACAGCCTCTTCTGTGGGATCAGGGAGACCTTCTAATTGATTTTCAGATTTCACAGGCCCCAGTCCTGCCTTGTTTCCCAGCCCAATCTGTCCTCCCCTTTTCCTATCACTTTAGCCC	G	20	PASS	ClusterIDs=HG2_PB_pbsv_133:HG2_10X_allpass_7:HG2_PB_SVrefine2PB10Xhap12_114:HG2_PB_SVrefine2PBcRplusDovetail_90:HG3_Ill_Krunchall_88:HG2_Ill_Krunchall_89:HG2_Ill_tnscope_2:HG2_Ill_MetaSV_20:HG2_PB_PB10Xdip_2370:HG3_Ill_SVrefine2DISCOVARDovetail_49:HG3_Ill_GATKHCSBGrefine_51:HG3_10X_allpass_13:HG2_PB_SVrefine2PB10Xhap12_113:HG2_PB_SVrefine2Falcon2Bionano_88:HG2_PB_PB10Xdip_2369:HG2_Ill_scalpel_67:HG2_Ill_breakscan11_19:HG2_Ill_SpiralSDKrefine_66:HG2_Ill_SVrefine2DISCOVARplusDovetail_67:HG2_Ill_GATKHCSBGrefine_58;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_58:HG2_Ill_SVrefine2DISCOVARplusDovetail_67:HG2_Ill_SpiralSDKrefine_66:HG2_Ill_breakscan11_19:HG2_Ill_scalpel_67:HG2_PB_PB10Xdip_2369:HG2_PB_SVrefine2Falcon2Bionano_88:HG2_PB_SVrefine2PB10Xhap12_113:HG3_10X_allpass_13:HG3_Ill_GATKHCSBGrefine_51:HG3_Ill_SVrefine2DISCOVARDovetail_49;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0545703;ClusterMaxSizeDiff=0.0544218;ClusterMaxEditDist=0.109141;PBcalls=7;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-366;DistBack=-151;DistForward=-364;DistMin=-364;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:5350911-5351279;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=18.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:19:4:5:22:1|0:0:22:67:0:0/1:47:17:0/1:27:8:.:.:.
chr1	5364059	HG2_Ill_GATKHCSBGrefine_59	TCAAGTGCCCAGTACCTACCACAGCTCATGGGTATACACCTAAGTCAACAACCAAGTGCCCAGTACCTACCACAGCTCATGGGTATATACCTAAGTTAATAAC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_106:HG2_PB_pbsv_134:HG2_PB_HySA_229:HG4_Ill_GATKHC_136:HG4_Ill_GATKHCSBGrefine_77:HG2_PB_SVrefine2PBcRplusDovetail_91:HG2_PB_SVrefine2PB10Xhap12_115:HG2_Ill_GATKHC_134:HG2_Ill_GATKHCSBGrefine_59:HG4_PB_pbsv_135:HG4_Ill_SVrefine2DISCOVARDovetail_56;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_59:HG2_Ill_GATKHC_134:HG2_PB_SVrefine2PB10Xhap12_115:HG2_PB_SVrefine2PBcRplusDovetail_91:HG4_Ill_GATKHCSBGrefine_77:HG4_Ill_GATKHC_136;NumExactMatchSVs=6;ClusterMaxShiftDist=0.029703;ClusterMaxSizeDiff=0.0295567;ClusterMaxEditDist=0.0591133;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-102;DistBack=12782;DistForward=-78;DistMin=-78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=209;REFWIDENED=1:5364033-5364343;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=19.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:45:0|1:23:0:1:42:0|1:21:1:0:12:0/1:20:18:./.:.:.:.:.:.
chr1	5474212	HG3_10X_allpass_14	CGGGCATCTATGATGCTGATTGATGTCCCCAGCATCCCGGGCATCTATGATGCTGATTGATGTCCCCAGCATCCCG	C	20	PASS	ClusterIDs=HG2_PB_pbsv_137:HG4_Ill_Krunchall_88:HG4_Ill_svaba_120:HG4_Ill_Krunchall_87:HG4_Ill_GATKHC_140:HG4_Ill_GATKHCSBGrefine_78:HG4_Ill_250bpfermikitraw_100:HG3_Ill_svaba_126:HG3_Ill_manta_13:HG3_Ill_Krunchall_89:HG3_Ill_GATKHC_152:HG3_Ill_GATKHCSBGrefine_52:HG3_Ill_250bpfermikitraw_110:HG3_10X_allpass_14:HG2_Ill_svaba_124:HG2_Ill_Krunchall_91:HG2_Ill_GATKHC_137:HG2_Ill_GATKHCSBGrefine_60:HG2_Ill_250bpfermikitraw_107:HG3_PB_pbsv_134:HG4_PB_pbsv_139;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_107:HG2_Ill_GATKHCSBGrefine_60:HG2_Ill_GATKHC_137:HG2_Ill_Krunchall_91:HG2_Ill_svaba_124:HG3_10X_allpass_14:HG3_Ill_250bpfermikitraw_110:HG3_Ill_GATKHCSBGrefine_52:HG3_Ill_GATKHC_152:HG3_Ill_Krunchall_89:HG3_Ill_manta_13:HG3_Ill_svaba_126:HG4_Ill_250bpfermikitraw_100:HG4_Ill_GATKHCSBGrefine_78:HG4_Ill_GATKHC_140:HG4_Ill_Krunchall_87:HG4_Ill_svaba_120;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0268456;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.0402685;PBcalls=3;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-75;DistBack=9033;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:5474211-5474306;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=20.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:22:1|0:2:18:28:1:./.:0:16:14:5:0/1:33:16:./.:.:.:.:.:.
chr1	5804147	HG2_PB_SVrefine2Falcon2Bionano_91	ATTCTTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTTCTTCCCTCCCTCCCTTCCTTCTTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_91:HG4_PB_SVrefine2PBcRDovetail_69:HG2_PB_HySA_240:HG3_Ill_GATKHCSBGrefine_55:HG2_Ill_GATKHC_145:HG3_PB_assemblyticsfalcon_157:HG3_PB_SVrefine2Falcon1Dovetail_98:HG3_Ill_SVrefine2DISCOVARDovetail_55:HG2_Ill_SVrefine2DISCOVARplusDovetail_71:HG2_10X_SVrefine210Xhap12_84:HG4_Ill_GATKHC_147:HG2_10X_allpass_8:HG4_PB_pbsv_142:HG3_PB_pbsv_137:HG2_PB_pbsv_140:HG4_PB_SVrefine2Falcon1Dovetail_96:HG3_PB_SVrefine2PBcRDovetail_82:HG2_PB_SVrefine2PBcRplusDovetail_96:HG2_PB_SVrefine2PB10Xhap12_120;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_91:HG4_PB_SVrefine2Falcon1Dovetail_96:HG3_PB_SVrefine2PBcRDovetail_82:HG2_PB_SVrefine2PBcRplusDovetail_96:HG2_PB_SVrefine2PB10Xhap12_120;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0895522;ClusterMaxSizeDiff=0.0895522;ClusterMaxEditDist=0.119403;PBcalls=12;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=-96;DistBack=7686;DistForward=-97;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:5804146-5804247;PctSeqSimilarity=0.9662;PctSizeSimilarity=0.96;PctRecOverlap=0.7426;SizeDiff=-4;StartDistance=-22;EndDistance=-26;GTMatch=0;TruScore=88;MatchId=21.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:1:20:0:10:./.:6:1:7:1:0/0:17:0:./.:.:.:.:.:.
chr1	6220040	HG2_Ill_SVrefine2DISCOVARplusDovetail_75	AGGAAGAGCCCCAGCCAGGGAAGGGCCCCAGCCAGAGAAGAAAAGCCCCAGCCAGGGAAGGGCCTCAGCCAGAGAAGAAGAGCCACAGCCAGGGAAGGGCCCCAGCCAGAGAAGAAGAACCCCAGCCAGGGAAGGGCCCCAGCCAGGGAAGGGCCCCAGCCAGGGAAGGGCCCCAGCAAGGGAAGAGCCCCAGCCAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_90:HG2_Ill_GATKHCSBGrefine_65:HG2_PB_SVrefine2PB10Xhap12_132:HG4_PB_pbsv_155:HG2_PB_pbsv_151:HG4_PB_SVrefine2PBcRDovetail_74:HG2_PB_SVrefine2Falcon2Bionano_99:HG2_Ill_SVrefine2DISCOVARplusDovetail_75;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_75:HG2_PB_SVrefine2Falcon2Bionano_99:HG4_PB_SVrefine2PBcRDovetail_74;NumExactMatchSVs=3;ClusterMaxShiftDist=0.207283;ClusterMaxSizeDiff=0.207283;ClusterMaxEditDist=0.229692;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-196;DistBack=4809;DistForward=-113;DistMin=-113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=353;REFWIDENED=1:6220041-6220589;PctSeqSimilarity=0.9497;PctSizeSimilarity=1;PctRecOverlap=0.1472;SizeDiff=0;StartDistance=-168;EndDistance=-168;GTMatch=0;TruScore=69;MatchId=22.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:11:./.:26:4:2:6:0/0:21:0:11:0:0/0:21:0:./.:.:.:.:.:.
chr1	7039852	HG3_Ill_GATKHC_178	CGTAGCTGGGGGAGAGGACCCCCGGCACCCGGGACACTGTCCTCTCATGGTGGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_96:HG3_PB_HySA_204:HG2_PB_pbsv_157:HG3_Ill_svaba_143:HG3_Ill_scalpel_86:HG3_Ill_manta_16:HG3_Ill_Krunchall_104:HG3_Ill_GATKHC_178:HG3_Ill_GATKHCSBGrefine_64:HG3_Ill_Cortex_24:HG3_Ill_250bpfermikitraw_129:HG3_Ill_150bpfermikitraw_101:HG2_Ill_svaba_141:HG2_Ill_manta_18:HG2_Ill_breakscan11_23:HG2_Ill_SpiralSDKrefine_78:HG2_Ill_Krunchall_106:HG2_Ill_GATKHC_161:HG2_Ill_GATKHCSBGrefine_69:HG2_Ill_Cortex_24:HG2_Ill_250bpfermikitraw_123:HG2_Ill_150bpfermikitraw_99:HG3_PB_pbsv_160:HG3_PB_SVrefine2PBcRDovetail_93;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_99:HG2_Ill_250bpfermikitraw_123:HG2_Ill_Cortex_24:HG2_Ill_GATKHCSBGrefine_69:HG2_Ill_GATKHC_161:HG2_Ill_Krunchall_106:HG2_Ill_SpiralSDKrefine_78:HG2_Ill_breakscan11_23:HG2_Ill_manta_18:HG2_Ill_svaba_141:HG3_Ill_150bpfermikitraw_101:HG3_Ill_250bpfermikitraw_129:HG3_Ill_Cortex_24:HG3_Ill_GATKHCSBGrefine_64:HG3_Ill_GATKHC_178:HG3_Ill_Krunchall_104:HG3_Ill_manta_16:HG3_Ill_scalpel_86:HG3_Ill_svaba_143;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0373832;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.186916;PBcalls=4;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-53;DistBack=15443;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=85;REFWIDENED=1:7039793-7039930;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=23.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:20:./.:33:15:2:11:1|0:0:17:27:1:0/1:19:23:./.:.:.:.:.:.
chr1	7602613	HG2_Ill_svaba_146	AGCCTCCTGAGTAGCTGGGATTACAGGTGTGTGCCTCCTGAGTAGCTGGGATTACAGGTGTGT	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_129:HG4_PB_assemblyticsfalcon_184:HG3_PB_HySA_213:HG2_PB_pbsv_163:HG4_PB_pbsv_165:HG3_PB_pbsv_166:HG4_Ill_svaba_145:HG4_Ill_manta_19:HG4_Ill_Krunchall_111:HG4_Ill_GATKHCSBGrefine_89:HG4_Ill_250bpfermikitraw_124:HG3_PB_SVrefine2PBcRDovetail_97:HG3_PB_SVrefine2Falcon1Dovetail_122:HG3_Ill_svaba_147:HG3_Ill_Krunchall_107:HG3_Ill_GATKHCSBGrefine_66:HG3_Ill_250bpfermikitraw_133:HG3_10X_allpass_17:HG2_PB_SVrefine2PBcRplusDovetail_113:HG2_PB_SVrefine2PB10Xhap12_145:HG2_PB_SVrefine2Falcon1plusDovetail_132:HG2_Ill_svaba_146:HG2_Ill_manta_19:HG2_Ill_GATKHCSBGrefine_73;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_129:HG4_Ill_svaba_145:HG4_Ill_manta_19:HG4_Ill_Krunchall_111:HG4_Ill_GATKHCSBGrefine_89:HG4_Ill_250bpfermikitraw_124:HG3_PB_SVrefine2PBcRDovetail_97:HG3_PB_SVrefine2Falcon1Dovetail_122:HG3_Ill_svaba_147:HG3_Ill_Krunchall_107:HG3_Ill_GATKHCSBGrefine_66:HG3_Ill_250bpfermikitraw_133:HG3_10X_allpass_17:HG2_PB_SVrefine2PBcRplusDovetail_113:HG2_PB_SVrefine2PB10Xhap12_145:HG2_PB_SVrefine2Falcon1plusDovetail_132:HG2_Ill_svaba_146:HG2_Ill_manta_19:HG2_Ill_GATKHCSBGrefine_73;NumExactMatchSVs=19;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.0322581;PBcalls=10;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=0;DistForward=2;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=65;REFWIDENED=1:7602614-7602740;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=24.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:34:./.:4:25:12:14:1|0:0:7:25:1:0/1:20:14:./.:.:.:.:.:.
chr1	8728991	HG2_Ill_SVrefine2DISCOVARplusDovetail_91	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTTTTTAAGACAGGGTCTCACTCTGTCTTCTGTGAATATTCTAAAATGCACTCAACTC	G	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_94:HG3_PB_assemblyticsfalcon_210:HG2_PB_HySA_309:HG4_PB_HySA_236:HG3_PB_pbsv_187:HG4_PB_pbsv_184:HG3_PB_HySA_233:HG2_PB_pbsv_181:HG4_Ill_SVrefine2DISCOVARDovetail_80:HG4_Ill_Krunchall_122:HG4_Ill_150bpfermikitraw_113:HG2_PB_assemblyticsPBcR_193:HG2_PB_SVrefine2PBcRplusDovetail_124:HG2_PB_SVrefine2PB10Xhap12_159:HG2_Ill_scalpel_98:HG2_Ill_GATKHC_178:HG3_Ill_scalpel_99:HG3_Ill_SVrefine2DISCOVARDovetail_75:HG3_Ill_GATKHC_195:HG3_Ill_GATKHCSBGrefine_72:HG2_PB_SVrefine2PB10Xhap12_158:HG2_Ill_scalpel_97:HG2_Ill_SVrefine2DISCOVARplusDovetail_91:HG2_Ill_GATKHC_177:HG2_Ill_250bpfermikitraw_139:HG2_PB_assemblyticsfalcon_220:HG2_PB_SVrefine2Falcon1plusDovetail_143:HG3_PB_SVrefine2Falcon1Dovetail_135:HG2_10X_SVrefine210Xhap12_110:HG4_Ill_scalpel_84:HG4_PB_SVrefine2Falcon1Dovetail_129;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_250bpfermikitraw_139:HG2_Ill_GATKHC_177:HG2_Ill_SVrefine2DISCOVARplusDovetail_91:HG2_Ill_scalpel_97:HG2_PB_SVrefine2PB10Xhap12_158:HG3_Ill_GATKHCSBGrefine_72:HG3_Ill_GATKHC_195:HG3_Ill_SVrefine2DISCOVARDovetail_75:HG3_Ill_scalpel_99;NumExactMatchSVs=9;ClusterMaxShiftDist=0.338798;ClusterMaxSizeDiff=0.338798;ClusterMaxEditDist=0.338798;PBcalls=15;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-92;DistBack=7;DistForward=-58;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=121;REFWIDENED=1:8728954-8729166;PctSeqSimilarity=0.978;PctSizeSimilarity=0.9565;PctRecOverlap=0.957;SizeDiff=4;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=96;MatchId=25.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:67:1/1:4:39:0:5:./.:1:26:1:15:1/1:0:26:./.:.:.:.:.:.
chr1	9370132	HG4_Ill_Krunchall_133	CCTGTGATGATGCCTCTGCACCTGCCGTGGGAAGGCCACAGAGTCTAGGGGCCAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_116:HG2_PB_HySA_324:HG2_PB_pbsv_189:HG4_PB_pbsv_192:HG4_Ill_svaba_165:HG4_Ill_Krunchall_133:HG4_Ill_GATKHCSBGrefine_102:HG4_Ill_250bpfermikitraw_144:HG2_PB_SVrefine2PBcRplusDovetail_131:HG2_PB_SVrefine2Falcon1plusDovetail_150:HG2_Ill_svaba_163:HG2_Ill_SpiralSDKrefine_103:HG2_Ill_SVrefine2DISCOVARplusDovetail_99:HG2_Ill_GATKHCSBGrefine_81:HG2_Ill_250bpfermikitraw_147;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_116:HG4_Ill_svaba_165:HG4_Ill_Krunchall_133:HG4_Ill_GATKHCSBGrefine_102:HG4_Ill_250bpfermikitraw_144:HG2_PB_SVrefine2PBcRplusDovetail_131:HG2_PB_SVrefine2Falcon1plusDovetail_150:HG2_Ill_svaba_163:HG2_Ill_SpiralSDKrefine_103:HG2_Ill_SVrefine2DISCOVARplusDovetail_99:HG2_Ill_GATKHCSBGrefine_81:HG2_Ill_250bpfermikitraw_147;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0373832;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0934579;PBcalls=5;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=761;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=103;REFWIDENED=1:9370133-9370289;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=26.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:./.:26:7:10:18:./.:6:1:0:5:0/1:23:19:./.:.:.:.:.:.
chr1	12822091	HG4_PB_SVrefine2Falcon1Dovetail_149	CCACCTACCTTAGGGTCACTTTGGCACCTACTAAGCTCCTTCCTTAGTCATCCAAGTGTCCATGTAAGGACACTGTCTTCCATCCCAACTGAAAGTCAGAGCCTGACACAGGCTAAGTCCTCTATGTTTGTTGGATGAGTGAATGACAGGAGTTGAACAAATGAGTTGAATGAATGAATGACAGGAGGAGGAGCCAGGGGGTGCAGAAAGGTTG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_135:HG4_Ill_GATKHCSBGrefine_115:HG4_PB_pbsv_210:HG4_Ill_MetaSV_32:HG3_PB_pbsv_214:HG2_PB_pbsv_202:HG4_PB_SVrefine2PBcRDovetail_107:HG4_PB_SVrefine2PBcRDovetail_106:HG4_PB_SVrefine2Falcon1Dovetail_149:HG4_Ill_SVrefine2DISCOVARDovetail_105:HG3_PB_SVrefine2Falcon1Dovetail_154:HG3_Ill_SVrefine2DISCOVARDovetail_96:HG2_PB_SVrefine2PB10Xhap12_183;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_135:HG4_PB_SVrefine2PBcRDovetail_106:HG4_PB_SVrefine2Falcon1Dovetail_149:HG4_Ill_SVrefine2DISCOVARDovetail_105:HG3_PB_SVrefine2Falcon1Dovetail_154:HG3_Ill_SVrefine2DISCOVARDovetail_96:HG2_PB_SVrefine2PB10Xhap12_183;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0141176;ClusterMaxSizeDiff=0.0141176;ClusterMaxEditDist=0.0282353;PBcalls=8;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-213;DistBack=38233;DistForward=-19;DistMin=-19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=426;REFWIDENED=1:12822092-12822730;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=27.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:18:0|1:30:0:2:21:./.:5:4:19:1:0/1:30:4:./.:.:.:.:.:.
chr1	13827855	HG2_10X_SVrefine210Xhap12_138	ATTTTATTTATTTATTTATTTTGAGACGGAATCTCACTCTGTTGCCCAGGCTGGGGTGCAGTAGAGTGATCTCAGCTCACTCCAACTTCCAACTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCTAGCAGCTGGGATTACAGGTGCACGCCACCATGCCCGACTAATTTTTGTGGAGTTTTTTGTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_138:HG2_PB_pbsv_208:HG4_PB_pbsv_216:HG4_Ill_GATKHCSBGrefine_123:HG4_10X_allpass_13:HG2_Ill_SpiralSDKrefine_119:HG2_Ill_GATKHCSBGrefine_98:HG2_10X_allpass_14:HG2_Ill_MetaSV_37:HG4_PB_SVrefine2PBcRDovetail_112:HG2_PB_SVrefine2PB10Xhap12_191:HG2_PB_SVrefine2Falcon2Bionano_101:HG2_Ill_SVrefine2DISCOVARplusDovetail_118;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_138:HG4_PB_SVrefine2PBcRDovetail_112:HG2_PB_SVrefine2PB10Xhap12_191:HG2_PB_SVrefine2Falcon2Bionano_101:HG2_Ill_SVrefine2DISCOVARplusDovetail_118;NumExactMatchSVs=5;ClusterMaxShiftDist=0.021164;ClusterMaxSizeDiff=0.021164;ClusterMaxEditDist=0.111111;PBcalls=5;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-190;DistBack=31039;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=350;REFWIDENED=1:13827856-13828395;PctSeqSimilarity=0.9077;PctSizeSimilarity=0.9947;PctRecOverlap=0.4921;SizeDiff=1;StartDistance=-97;EndDistance=-96;GTMatch=0;TruScore=79;MatchId=28.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:28:./.:21:11:5:13:0/0:14:0:21:0:0/0:63:1:./.:.:.:.:.:.
chr1	13894348	HG2_PB_SVrefine2PBcRplusDovetail_149	GAGAGAGGGAAAGAGAGGCAGAGAGAGAGAGGGGGGAAAGAGAGGCAGAGAGAGAGGGGAAAGAGGCAGAGAGAGAGGGGAAAGAGAGGCAGAGGGGGGAAAGAGGCAGAGAGAGAGAGAGGGGAAAGAGAGGC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_102:HG3_PB_pbsv_220:HG4_PB_assemblyticsfalcon_249:HG4_PB_SVrefine2Falcon1Dovetail_155:HG2_PB_pbsv_209:HG2_10X_SVrefine210Xhap12_140:HG4_PB_pbsv_219:HG4_PB_SVrefine2PBcRDovetail_114:HG3_PB_SVrefine2Falcon1Dovetail_159:HG3_Ill_SVrefine2DISCOVARDovetail_98:HG2_PB_SVrefine2PBcRplusDovetail_149:HG2_PB_SVrefine2PB10Xhap12_192;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_102:HG4_PB_SVrefine2PBcRDovetail_114:HG3_PB_SVrefine2Falcon1Dovetail_159:HG3_Ill_SVrefine2DISCOVARDovetail_98:HG2_PB_SVrefine2PBcRplusDovetail_149:HG2_PB_SVrefine2PB10Xhap12_192;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0827068;ClusterMaxSizeDiff=0.0827068;ClusterMaxEditDist=0.267176;PBcalls=10;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-133;DistBack=33882;DistForward=-134;DistMin=-134;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=159;REFWIDENED=1:13894349-13894640;PctSeqSimilarity=0.9349;PctSizeSimilarity=0.9774;PctRecOverlap=0.194;SizeDiff=3;StartDistance=-108;EndDistance=-105;GTMatch=0;TruScore=70;MatchId=29.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:20:./.:9:13:18:6:0/0:22:1:29:1:0/0:9:0:./.:.:.:.:.:.
chr1	14657709	HG2_Ill_GATKHCSBGrefine_101	CTCGGAAACAGTGAGATAGAAGGGGCTTGAATCTCCAAGTGAGAGGCATCCATGACTGCATGGATAGCCCACCCCTAGGCTGTGATATGGGACGGAAATCAGCTCCCGTCTTATATATGCACCCGCATTGTGGAAATCTCTTTGTTAGAGCAGTGGGCTCTATCCTCATATGAGCAGGATAGTCTCCAAACAATTGACAGTAGTTTCTGAGATATTGACAGTGGTTTCCAAGGTATGGCATTGGAAGTGAGAAGAGAGGGATTCTTACTAATTTTACTTTTATACCTTACTGCTGCTATTTGTAAATGTTGCAATAATGTTTTACTTGTTAATTTTCTTGGACCTCAGGTGTCAAAATTGGGTTAATTATAAGCTGTGGTTTGTAATACACATTTATCATTGGTCTATAAAGGGGCCTCTTTTATTTAGTTAATTCATTTTTGTTCTCTTCTTAAAAAGATACTAAGCACCGTCTATCACCCGAACAACAAAAACTAGAACCTTCATCTAACCATATGCTGCTATCCACCCCATCCCATCCCCTGCTTCCCCCTACCAGGAATAAATAACCATTTTCCCAATTTCCATCATTTCCTTGCTTTTCTTCTTCTATATATTTTATTGCATTTGTATGCACGCTTTAAATGCCTATTTTTAAATGTTAGCTGGCTTTATACTTATAAAAAGAATATCATGCTATATATAAAATTTTGACAATTTTTATACTTAATATTATATTTCTAAGATACATCTGCATGATTTGCAAGTTGCTATAGT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_214:HG2_10X_allpass_16:HG2_PB_assemblyticsfalcon_271:HG2_PB_assemblyticsPBcR_252:HG2_Ill_tnscope_4:HG4_Ill_Cortex_30:HG3_PB_pbsv_226:HG3_PB_assemblyticsfalcon_269:HG3_PB_SVrefine2Falcon1Dovetail_163:HG3_Ill_manta_27:HG3_Ill_MetaSV_44:HG3_Ill_GATKHCSBGrefine_104:HG3_Ill_Cortex_35:HG3_10X_allpass_24:HG2_PB_SVrefine2PBcRplusDovetail_153:HG2_PB_SVrefine2PB10Xhap12_195:HG2_PB_SVrefine2Falcon1plusDovetail_170:HG2_Ill_manta_26:HG2_Ill_breakscan11_29:HG2_Ill_SpiralSDKrefine_131:HG2_Ill_SVrefine2DISCOVARplusDovetail_122:HG2_Ill_MetaSV_39:HG2_Ill_GATKHCSBGrefine_101:HG2_Ill_Cortex_42:HG2_10X_SVrefine210Xhap12_145:HG3_Ill_Krunchall_176:HG2_Ill_Krunchall_167;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_145:HG2_Ill_Cortex_42:HG2_Ill_GATKHCSBGrefine_101:HG2_Ill_MetaSV_39:HG2_Ill_SVrefine2DISCOVARplusDovetail_122:HG2_Ill_SpiralSDKrefine_131:HG2_Ill_breakscan11_29:HG2_Ill_manta_26:HG2_PB_SVrefine2Falcon1plusDovetail_170:HG2_PB_SVrefine2PB10Xhap12_195:HG2_PB_SVrefine2PBcRplusDovetail_153:HG3_10X_allpass_24:HG3_Ill_Cortex_35:HG3_Ill_GATKHCSBGrefine_104:HG3_Ill_MetaSV_44:HG3_Ill_manta_27:HG3_PB_SVrefine2Falcon1Dovetail_163:HG3_PB_assemblyticsfalcon_269:HG3_PB_pbsv_226:HG4_Ill_Cortex_30;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00644745;ClusterMaxSizeDiff=0.00644745;ClusterMaxEditDist=0.00644745;PBcalls=9;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-776;DistBack=191266;DistForward=-775;DistMin=-775;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:14657710-14658487;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=30.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:1|0:11:35:22:0:0|1:57:0:0:27:0/1:53:21:0/1:49:20:.:.:.
chr1	18599939	HG2_Ill_svaba_231	ACTTTCTTTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_289:HG4_Ill_manta_40:HG2_Ill_manta_31:HG2_Ill_GATKHC_287:HG2_Ill_GATKHCSBGrefine_117:HG4_PB_pbsv_255:HG2_PB_HySA_434:HG4_Ill_svaba_247:HG4_Ill_250bpfermikitraw_235:HG4_Ill_150bpfermikitraw_213:HG2_PB_pbsv_246:HG2_Ill_svaba_231:HG2_Ill_Krunchall_201:HG2_Ill_250bpfermikitraw_225;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_225:HG2_Ill_Krunchall_201:HG2_Ill_svaba_231:HG2_PB_pbsv_246:HG4_Ill_150bpfermikitraw_213:HG4_Ill_250bpfermikitraw_235:HG4_Ill_svaba_247;NumExactMatchSVs=7;ClusterMaxShiftDist=0.205607;ClusterMaxSizeDiff=0.205607;ClusterMaxEditDist=0.205607;PBcalls=4;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=57238;DistForward=-38;DistMin=-38;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:18599938-18600008;PctSeqSimilarity=0.898;PctSizeSimilarity=0.7826;PctRecOverlap=0.5571;SizeDiff=-15;StartDistance=31;EndDistance=16;GTMatch=0;TruScore=74;MatchId=31.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:44:0|1:31:1:1:40:0|1:21:1:0:9:0/1:27:17:./.:.:.:.:.:.
chr1	18924452	HG2_Ill_250bpfermikitraw_234	GGTGGGGGGAGTGAGAAGTCCCTTTACCTGTGTCTGGTGTACAGATCGAGAGCAGCGCTCATAGTTTGGAA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_234:HG4_Ill_scalpel_149:HG2_PB_pbsv_250:HG4_PB_pbsv_259:HG2_PB_assemblyticsPBcR_295;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_234:HG2_PB_assemblyticsPBcR_295;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.124138;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=-206;DistForward=4456;DistMin=-206;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=287;REFWIDENED=1:18924448-18924804;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=32.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:22:4:4:22:./.:6:0:0:2:0/1:8:11:./.:.:.:.:.:.
chr1	19151719	HG4_PB_SVrefine2Falcon1Dovetail_175	TCACCACCACCACCATCACCATCACAATTACCAACATCACCACTACCACCATCATTATCACCATCACCATCACCATTACCAACATCATCACTACCACCATCATTACCACCACCATCACCAACACCACTACTACCACTACCATCAACACTACCACCATCATTATCACACCACCATCACCATCTCCAACATGGTAACCACCACCGCTATCACCACCTCAATACAAAAAACAACACCATCATCACTACCAACACCAATACCAATACTCTAC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_143:HG2_PB_pbsv_253:HG3_Ill_MetaSV_51:HG4_PB_HySA_362:HG3_PB_pbsv_256:HG4_PB_pbsv_262:HG3_PB_HySA_331:HG2_PB_HySA_444:HG4_PB_SVrefine2PBcRDovetail_140:HG4_PB_SVrefine2Falcon1Dovetail_175:HG4_Ill_SVrefine2DISCOVARDovetail_129:HG3_PB_SVrefine2PBcRDovetail_156:HG3_Ill_SVrefine2DISCOVARDovetail_127:HG2_PB_SVrefine2PBcRplusDovetail_177:HG2_PB_SVrefine2PB10Xhap12_224:HG2_PB_SVrefine2Falcon2Bionano_121;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_143:HG4_PB_SVrefine2PBcRDovetail_140:HG4_PB_SVrefine2Falcon1Dovetail_175:HG4_Ill_SVrefine2DISCOVARDovetail_129:HG3_PB_SVrefine2PBcRDovetail_156:HG3_Ill_SVrefine2DISCOVARDovetail_127:HG2_PB_SVrefine2PBcRplusDovetail_177:HG2_PB_SVrefine2PB10Xhap12_224:HG2_PB_SVrefine2Falcon2Bionano_121;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0224719;ClusterMaxSizeDiff=0.0224719;ClusterMaxEditDist=0.0338346;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-267;DistBack=51935;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=516;REFWIDENED=1:19151720-19152502;PctSeqSimilarity=0.9406;PctSizeSimilarity=0.9963;PctRecOverlap=0.8134;SizeDiff=1;StartDistance=-50;EndDistance=-49;GTMatch=0;TruScore=91;MatchId=33.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:45:1/1:0:25:0:24:0/0:23:1:18:0:0/0:33:0:./.:.:.:.:.:.
chr1	20913605	HG4_Ill_Cortex_38	GGAGTCAAGGAGTCCTGAAGGCCGGTCCCAGGCCTGGGCAGGGCTGGGTGGGGCAGACT	G	20	PASS	ClusterIDs=HG2_CG_vcfBeta_110:HG3_PB_HySA_338:HG3_PB_pbsv_265:HG3_PB_assemblyticsfalcon_327:HG4_PB_pbsv_269:HG4_PB_assemblyticsfalcon_317:HG4_PB_SVrefine2PBcRDovetail_145:HG4_Ill_svaba_262:HG4_Ill_scalpel_159:HG4_Ill_manta_45:HG4_Ill_SVrefine2DISCOVARDovetail_138:HG4_Ill_Krunchall_247:HG4_Ill_GATKHC_330:HG4_Ill_GATKHCSBGrefine_154:HG4_Ill_Cortex_38:HG4_Ill_250bpfermikitraw_256:HG4_Ill_150bpfermikitraw_231:HG4_CG_vcfBeta_115:HG3_PB_SVrefine2PBcRDovetail_162:HG3_PB_SVrefine2Falcon1Dovetail_180:HG3_Ill_svaba_255:HG3_Ill_scalpel_177:HG3_Ill_manta_36:HG3_Ill_SVrefine2DISCOVARDovetail_140:HG3_Ill_Krunchall_232:HG3_Ill_GATKHC_326:HG3_Ill_GATKHCSBGrefine_132:HG3_Ill_Cortex_45:HG3_Ill_250bpfermikitraw_244:HG3_Ill_150bpfermikitraw_213:HG3_CG_vcfBeta_121:HG2_PB_pbsv_260:HG2_PB_SVrefine2PB10Xhap12_232:HG2_Ill_svaba_243:HG2_Ill_scalpel_168:HG2_Ill_breakscan11_32:HG2_Ill_Krunchall_216:HG2_Ill_GATKHC_305:HG2_Ill_GATKHCSBGrefine_128:HG2_Ill_Cortex_65:HG2_Ill_250bpfermikitraw_247:HG2_Ill_150bpfermikitraw_203;NumClusterSVs=42;ExactMatchIDs=HG2_CG_vcfBeta_110:HG4_PB_pbsv_269:HG4_PB_assemblyticsfalcon_317:HG4_PB_SVrefine2PBcRDovetail_145:HG4_Ill_svaba_262:HG4_Ill_scalpel_159:HG4_Ill_manta_45:HG4_Ill_SVrefine2DISCOVARDovetail_138:HG4_Ill_Krunchall_247:HG4_Ill_GATKHC_330:HG4_Ill_GATKHCSBGrefine_154:HG4_Ill_Cortex_38:HG4_Ill_250bpfermikitraw_256:HG4_Ill_150bpfermikitraw_231:HG4_CG_vcfBeta_115:HG3_PB_SVrefine2PBcRDovetail_162:HG3_PB_SVrefine2Falcon1Dovetail_180:HG3_Ill_svaba_255:HG3_Ill_scalpel_177:HG3_Ill_manta_36:HG3_Ill_SVrefine2DISCOVARDovetail_140:HG3_Ill_Krunchall_232:HG3_Ill_GATKHC_326:HG3_Ill_GATKHCSBGrefine_132:HG3_Ill_Cortex_45:HG3_Ill_250bpfermikitraw_244:HG3_Ill_150bpfermikitraw_213:HG3_CG_vcfBeta_121:HG2_PB_pbsv_260:HG2_PB_SVrefine2PB10Xhap12_232:HG2_Ill_svaba_243:HG2_Ill_scalpel_168:HG2_Ill_breakscan11_32:HG2_Ill_Krunchall_216:HG2_Ill_GATKHC_305:HG2_Ill_GATKHCSBGrefine_128:HG2_Ill_Cortex_65:HG2_Ill_250bpfermikitraw_247:HG2_Ill_150bpfermikitraw_203;NumExactMatchSVs=39;ClusterMaxShiftDist=0.0854701;ClusterMaxSizeDiff=0.0854701;ClusterMaxEditDist=0.0854701;PBcalls=10;Illcalls=29;TenXcalls=0;CGcalls=3;PBexactcalls=7;Illexactcalls=29;TenXexactcalls=0;CGexactcalls=3;HG2count=12;HG3count=16;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-58;DistBack=87;DistForward=11485;DistMin=87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:20913606-20913666;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=34.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:./.:4:24:21:8:0|1:25:1:0:8:0/1:27:19:./.:.:.:.:.:.
chr1	22144499	HG2_10X_SVrefine210Xhap12_187	AGCTGGGATTACAGGTGCACACCACCACGCTCAGCTAATTTTTGTATTTTTAGTAGAGACGGGATTTCTCCATGTTGGACAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCACCCGCCTTGGCCTCCCAAAGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_187:HG4_Ill_Krunchall_262:HG3_Ill_Krunchall_244:HG2_Ill_Krunchall_230:HG2_PB_pbsv_275:HG4_PB_pbsv_286:HG3_PB_pbsv_281:HG3_Ill_GATKHCSBGrefine_147:HG2_Ill_GATKHCSBGrefine_138:HG2_PB_PB10Xdip_949:HG2_PB_PB10Xdip_948:HG4_PB_SVrefine2PBcRDovetail_153:HG4_PB_SVrefine2Falcon1Dovetail_188:HG4_Ill_SVrefine2DISCOVARDovetail_145:HG3_PB_SVrefine2PBcRDovetail_169:HG3_PB_SVrefine2Falcon1Dovetail_190:HG3_Ill_SVrefine2DISCOVARDovetail_152:HG2_PB_SVrefine2PBcRplusDovetail_190:HG2_PB_SVrefine2PB10Xhap12_244:HG2_PB_SVrefine2Falcon2Bionano_135:HG2_PB_SVrefine2Falcon1plusDovetail_191:HG2_Ill_SVrefine2DISCOVARplusDovetail_159;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_187:HG4_PB_SVrefine2PBcRDovetail_153:HG4_PB_SVrefine2Falcon1Dovetail_188:HG4_Ill_SVrefine2DISCOVARDovetail_145:HG3_PB_SVrefine2PBcRDovetail_169:HG3_PB_SVrefine2Falcon1Dovetail_190:HG3_Ill_SVrefine2DISCOVARDovetail_152:HG2_PB_SVrefine2PBcRplusDovetail_190:HG2_PB_SVrefine2PB10Xhap12_244:HG2_PB_SVrefine2Falcon2Bionano_135:HG2_PB_SVrefine2Falcon1plusDovetail_191:HG2_Ill_SVrefine2DISCOVARplusDovetail_159;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0224719;ClusterMaxSizeDiff=0.0223048;ClusterMaxEditDist=0.0374532;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-135;DistBack=14553;DistForward=-14;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=149;REFWIDENED=1:22144500-22144783;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=35.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:1:22:0:17:./.:0:2:0:2:1/1:0:20:./.:.:.:.:.:.
chr1	22286329	HG2_Ill_scalpel_179	ACGGTGGCCCATGCCTGTAATCCCAGCATTTCAGGAGGCCATGGCAGGATG	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_347:HG2_PB_HySA_479:HG4_PB_HySA_387:HG3_PB_HySA_360:HG4_Ill_scalpel_168:HG4_Ill_GATKHCSBGrefine_171:HG4_Ill_250bpfermikitraw_270:HG4_Ill_150bpfermikitraw_247:HG3_Ill_scalpel_187:HG3_Ill_GATKHCSBGrefine_148:HG3_Ill_250bpfermikitraw_253:HG3_Ill_150bpfermikitraw_223:HG3_10X_allpass_32:HG2_PB_assemblyticsfalcon_343:HG2_PB_assemblyticsPBcR_325:HG2_Ill_scalpel_179:HG2_Ill_SpiralSDKrefine_165:HG2_Ill_GATKHCSBGrefine_139:HG2_Ill_250bpfermikitraw_259:HG2_Ill_150bpfermikitraw_217:HG4_PB_assemblyticsfalcon_334;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_217:HG2_Ill_250bpfermikitraw_259:HG2_Ill_GATKHCSBGrefine_139:HG2_Ill_SpiralSDKrefine_165:HG2_Ill_scalpel_179:HG2_PB_assemblyticsPBcR_325:HG2_PB_assemblyticsfalcon_343:HG3_10X_allpass_32:HG3_Ill_150bpfermikitraw_223:HG3_Ill_250bpfermikitraw_253:HG3_Ill_GATKHCSBGrefine_148:HG3_Ill_scalpel_187:HG4_Ill_150bpfermikitraw_247:HG4_Ill_250bpfermikitraw_270:HG4_Ill_GATKHCSBGrefine_171:HG4_Ill_scalpel_168;NumExactMatchSVs=16;ClusterMaxShiftDist=0.10101;ClusterMaxSizeDiff=0.10101;ClusterMaxEditDist=0.121212;PBcalls=7;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=96569;DistForward=1298;DistMin=1298;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=77;REFWIDENED=1:22286328-22286457;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=36.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:1:17:1:21:1/1:0:6:0:6:1/1:0:46:./.:.:.:.:.:.
chr1	22926177	HG2_Ill_svaba_263	AAGGAAAGGAGGGAGGGAGGAAGGAGGGAAGGAAGGGAGGGAGGGAAGGAAGG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_278:HG3_Ill_svaba_276:HG3_Ill_scalpel_194:HG3_Ill_GATKHC_353:HG2_Ill_svaba_263:HG2_Ill_scalpel_186:HG2_Ill_manta_42:HG2_Ill_GATKHC_335;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_335:HG2_Ill_manta_42:HG2_Ill_scalpel_186:HG2_Ill_svaba_263:HG3_Ill_GATKHC_353:HG3_Ill_scalpel_194:HG3_Ill_svaba_276;NumExactMatchSVs=7;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.037037;PBcalls=1;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-52;DistBack=-51;DistForward=-21;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:22926176-22926233;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=37.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:22:0|1:24:1:3:21:./.:3:16:53:4:0/1:7:10:./.:.:.:.:.:.
chr1	24402985	HG3_10X_allpass_34	TCCCTAATGTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCATTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_33:HG2_PB_PB10Xdip_1376:HG3_PB_HySA_387:HG2_PB_SVrefine2PB10Xhap12_256:HG3_Ill_MetaSV_62:HG2_PB_HySA_514:HG2_Ill_tnscope_8:HG4_PB_SVrefine2Falcon1Dovetail_198:HG3_PB_SVrefine2PBcRDovetail_182:HG3_PB_SVrefine2Falcon1Dovetail_201:HG3_Ill_scalpel_214:HG3_Ill_SVrefine2DISCOVARDovetail_168:HG3_Ill_GATKHCSBGrefine_156:HG3_10X_allpass_34:HG2_PB_pbsv_290:HG2_PB_SVrefine2PBcRplusDovetail_202:HG2_Ill_manta_46:HG2_Ill_SpiralSDKrefine_181:HG2_Ill_SVrefine2DISCOVARplusDovetail_177:HG2_Ill_MetaSV_52:HG2_Ill_GATKHCSBGrefine_146:HG2_10X_SVrefine210Xhap12_203:HG3_PB_pbsv_296;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_203:HG2_Ill_GATKHCSBGrefine_146:HG2_Ill_MetaSV_52:HG2_Ill_SVrefine2DISCOVARplusDovetail_177:HG2_Ill_SpiralSDKrefine_181:HG2_Ill_manta_46:HG2_PB_SVrefine2PBcRplusDovetail_202:HG2_PB_pbsv_290:HG3_10X_allpass_34:HG3_Ill_GATKHCSBGrefine_156:HG3_Ill_SVrefine2DISCOVARDovetail_168:HG3_Ill_scalpel_214:HG3_PB_SVrefine2Falcon1Dovetail_201:HG3_PB_SVrefine2PBcRDovetail_182:HG4_PB_SVrefine2Falcon1Dovetail_198;NumExactMatchSVs=15;ClusterMaxShiftDist=0.105939;ClusterMaxSizeDiff=0.105939;ClusterMaxEditDist=0.105939;PBcalls=10;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=9100;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=325;REFWIDENED=1:24402986-24403627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=38.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:0|1:24:1:0:35:0|1:29:0:0:17:0/1:29:14:0/1:14:3:.:.:.
chr1	24804398	HG2_PB_SVrefine2PB10Xhap12_261	TTTTTTGAGACGGAGTTTCGCTCTTATTGCCCACGCTGGAGTGCAATGGTGCGATCTCAACTTACGGCAACCTCTGCTTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGATTACAGGCGCCCACCACCACGCACAGCTAATTTTTGTATTTTAGTAGAGACGGGGTTTCACCATGTCGGTCAGGCTGGTCTTGAACCCCTAACCTCAGGTGATCCACCTGCCTCTGCCTCCTGAAGTGCTGGGATTATAGGCATGAACCACTGTGCCCAGCATGTATCATTTCTTTATTTTATTTTATTTATTTATTTTGAGACAGGGTCTCACTCTGTCACCCACACTAGAGAGCAATAGTGTGATCACGGCTCACTGCAGCCTCGACTTCCTGGGCTCAAGTGGTCCTCCCACCTCAGCCTCCTGTGTAGCTGGGATTACAGGAGGGACCACCAGGCCCAGCTAATTTAAAATTTTTTTTTAATTTTTTTAGAAAAATTTAGAGACAGGATTTGCCATGTTGCCCAGGTTGGACTTGAATTCCTGAACTCCAGCAATCTGCCTGCCTTGGCCTCCCAAAGTGTGGGATTACAGGCGTGAGCCACTCTGCCTAGCCCAGGTATGTATCATTTCTTAGGCAGTCATGTCCATCAGGGTCAAGTCAGGAGACAGAAGCCACAGCAGTTATTGGAACAGAAAATTTAACATAAATAATTGTTAACTAGGGTTGGATGCAGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCTCAGGAATTCAAGACCGGCCTGGGCAACATAGTGAGACCCTGTCTCTACAATAAATACATACATAATTGTTAACTAAGTATACATTTTTTTTTTTACAAGGTAACTGAAAGGGTGAAAGAGGGCTAAGGTATTGTGGAGAGGACACTGTCAGAAGCTGCCACCCCTAGGGCTGGGGGAAGACAGGTAACAGGTTGGAATCATTAAAATGCAGGTGCCTGGAGGAGGGGCCCTGTGGAGCTGAAACTCAAGCACTGAGGAGGCAGCCTCACTAGCTGATGCTGTGTCTCAGCTTAGAGGAGAGGCCCTATAAAAAGGAGACCCAGGCCAGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAAGTCAGGAGTTCGAGACCAGCCTGGCCAAGATGGTGAAACCCCATCTCTACTAAAAATACAAAAATCAGCTGGGCGTGGTGGTGTATGCCTGTAATCCCAGCTACCTAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTAGAGGTTGCAGTGAGCCGAGACTGCACCACTGCACTCCAGCCTAGGTGACAAAGCAAGACTCCGTCTCAGGGAAAAAAATAAAAAAAAGGAGACCCAGACCCATGAGGCTCTGGATGAGCCCTGGAGACCACAGATTGAAAAAGAGACACTCCCTGACCTTAAGTGGGAGAGAAAACAATTATTTAACCATGCCAAGAATATCTGTTAGTGGTTCCTGTTCAACATGGCAACCTAGGCACACACATTCACCTCCTCTCTGCCCCAGAGTGGCTCTGAGCTCAGACAGTAAGTGAGAAGAACAAGTGTGCTATGGGCAGCAATCTGGATTAAAGGGAAGACTATTTATAGGTCCTGTGGACACAGAACAACATCAGCCCCAGAGGGAACCCTAAGAATTACTCTAAACAGCGGAAGATGGCCAGACGCGGTGACTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGTTCACCTGAGGTCGGGAGTTTGAGATCAGCCTCGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCATGGGAGCACATACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCACGCCATTGCACTCCAGCCCGGGTGACAGACTGAGACTCCGTCTGAAAAAAAAAAAAAAGAGTGGTAGATTTGGCTGTGGACGGCCCATGGTAGGGATATTGGAGCAGCAGGCAAGGAAACGAATGGACCTCCAGCTCTGTTCTGTCGGGAGACAGACCTATGGAGAGCTGGAGCCGAGTCCCATGTCCTTCAGCAGATGTCTTGTCCCAAGGCAGCCAGCAGCTCCATGCTCATGCACCTGAGGAGGAAGCCGATGACCAGGCCTGCTCACTTCCTCCAAGATGAAAATCCCCCCTCACATTCAGGGGATGATGGTACGCCTTCGGGTAAACAAATGCACACAACTGCAAAGGAAATCTCTAGTAAGTACTGTAGTTCTTTATTTATAAATGGGATTGTCCACCAAGAATCGCAAGACATTTGAGGAAATTCAACAGCTTGAAAGAGAGAGACTAAAATGACTGAGGCCGGGCACAGTGGTTCACACCTACAATCCCAGCACTTTAAGAGGCCGAGGCGGGAGGATTGCTTGAGACCGGGAGTTTGAGACCAGCCTGGGCAACCTGGTAAAACAATGCACACAATGCATGGTGCATGAGAGGCCCTGTCTCTACAAACGGTGAGACCCTGTCTCTACAAAAATACAAAAAATTAGATGGGCATGGTGGTGCACACTTGGAGTCCCAGCTACTTGGGGAGCCGAGGTGGGAGGATCACCTGAGCCCATTGATATGGAGGCTGCAGTAAGCCATGATTGCACCACTGCACTCTAGCCTGAGCGACAGAGCAAGACCCTGTCTCAAAAAATTTAAAAAATAAAATAATTGAGTTAATATAAGAATGGCAGGATAATGCAGACAGGGCAGTGGTTCATTAAATTACTTTCTCTATTTTATGTCTACATGAAGTGG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_53:HG4_PB_SVrefine2PBcRDovetail_169:HG2_10X_allpass_20:HG2_PB_assemblyticsfalcon_375:HG2_PB_assemblyticsPBcR_358:HG4_10X_allpass_19:HG2_PB_HySA_528:HG4_PB_pbsv_304:HG2_Ill_tnscope_9:HG4_Ill_MetaSV_55:HG2_PB_pbsv_294:HG2_Ill_SpiralSDKrefine_182:HG4_PB_SVrefine2PBcRDovetail_168:HG4_PB_SVrefine2Falcon1Dovetail_202:HG2_PB_SVrefine2PBcRplusDovetail_206:HG2_PB_SVrefine2PB10Xhap12_261:HG2_PB_SVrefine2Falcon1plusDovetail_206:HG2_10X_SVrefine210Xhap12_205:HG3_PB_SVrefine2Falcon1Dovetail_204;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_205:HG2_PB_SVrefine2Falcon1plusDovetail_206:HG2_PB_SVrefine2PB10Xhap12_261:HG2_PB_SVrefine2PBcRplusDovetail_206:HG4_PB_SVrefine2Falcon1Dovetail_202:HG4_PB_SVrefine2PBcRDovetail_168;NumExactMatchSVs=6;ClusterMaxShiftDist=0.270251;ClusterMaxSizeDiff=0.270251;ClusterMaxEditDist=0.270251;PBcalls=12;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-2904;DistBack=7125;DistForward=-2766;DistMin=-2766;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=286;REFWIDENED=1:24804399-24807588;PctSeqSimilarity=0.9137;PctSizeSimilarity=1;PctRecOverlap=0.9525;SizeDiff=0;StartDistance=-138;EndDistance=-138;GTMatch=0;TruScore=95;MatchId=39.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:47:0|1:29:1:2:16:./.:17:2:62:0:./.:81:5:0/1:227:103:2864:.:.
chr1	25126198	HG2_PB_SVrefine2Falcon1plusDovetail_209	CAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCGGCCAGCTGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCACCCCGTCCGGGGGGGGGGGTCAGCCCCCCCACCTGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_209:HG2_PB_pbsv_297:HG4_PB_pbsv_307:HG3_PB_pbsv_303:HG4_Ill_MetaSV_57:HG4_PB_SVrefine2PBcRDovetail_171:HG4_PB_SVrefine2Falcon1Dovetail_205:HG3_PB_SVrefine2PBcRDovetail_187:HG3_PB_SVrefine2Falcon1Dovetail_208:HG2_PB_SVrefine2PBcRplusDovetail_209:HG2_PB_SVrefine2PB10Xhap12_264;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_209:HG4_PB_SVrefine2PBcRDovetail_171:HG4_PB_SVrefine2Falcon1Dovetail_205:HG3_PB_SVrefine2PBcRDovetail_187:HG3_PB_SVrefine2Falcon1Dovetail_208:HG2_PB_SVrefine2PBcRplusDovetail_209:HG2_PB_SVrefine2PB10Xhap12_264;NumExactMatchSVs=7;ClusterMaxShiftDist=0.175182;ClusterMaxSizeDiff=0.17122;ClusterMaxEditDist=0.182482;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-297;DistBack=22897;DistForward=-231;DistMin=-231;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=436;REFWIDENED=1:25126199-25126931;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9933;PctRecOverlap=0.2987;SizeDiff=2;StartDistance=-209;EndDistance=-207;GTMatch=0;TruScore=75;MatchId=40.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:40:1/1:1:10:2:8:./.:2:0:2:0:0/0:18:0:./.:.:.:.:.:.
chr1	25158687	HG3_Ill_GATKHCSBGrefine_157	TTTGATTTTTTATTTTTTTTATTTTTTATTTTTTTTTTCTTTTGAGCAGTAACGTTTTATTTTTTATTTTTTTATTTTTTATTTTTTTTATTTTTTATTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCTGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTCTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCAGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCCGGCAGAAGTGCCCCTCACCTCCCAGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCGCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGTTCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCTGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGGGCGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGTTGACCCCCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGCCGGGGCGGCTGGCCGACCCCCCCCCCCCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGTTGCCAGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGAGCGGCCGGGCAGAGACACTCCTCACCTCCCAGACAGGGTTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGTGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTTCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCACACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAAACCCCATCTCCACCAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGACGGGAGAGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGCGAGCAGTAACGTTTTATA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_308:HG3_PB_assemblyticsfalcon_381:HG2_PB_assemblyticsPBcR_365:HG4_10X_allpass_20:HG4_PB_assemblyticsfalcon_369:HG2_PB_assemblyticsfalcon_381:HG2_10X_allpass_21:HG3_10X_allpass_35:HG4_Ill_Krunchall_287:HG3_PB_pbsv_304:HG3_Ill_Krunchall_267:HG2_Ill_Krunchall_258:HG4_PB_SVrefine2PBcRDovetail_172:HG4_PB_SVrefine2Falcon1Dovetail_206:HG4_Ill_MetaSV_58:HG4_Ill_GATKHCSBGrefine_183:HG3_PB_SVrefine2PBcRDovetail_188:HG3_PB_SVrefine2Falcon1Dovetail_209:HG3_Ill_SVrefine2DISCOVARDovetail_172:HG3_Ill_MetaSV_63:HG3_Ill_GATKHCSBGrefine_157:HG2_PB_pbsv_298:HG2_PB_SVrefine2PBcRplusDovetail_210:HG2_PB_SVrefine2PB10Xhap12_265:HG2_PB_SVrefine2Falcon1plusDovetail_210:HG2_Ill_SVrefine2DISCOVARplusDovetail_181:HG2_Ill_MetaSV_54:HG2_Ill_GATKHCSBGrefine_148:HG2_10X_SVrefine210Xhap12_207:HG2_Ill_tnscope_10;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_207:HG2_Ill_GATKHCSBGrefine_148:HG2_Ill_MetaSV_54:HG2_Ill_SVrefine2DISCOVARplusDovetail_181:HG2_PB_SVrefine2Falcon1plusDovetail_210:HG2_PB_SVrefine2PB10Xhap12_265:HG2_PB_SVrefine2PBcRplusDovetail_210:HG2_PB_pbsv_298:HG3_Ill_GATKHCSBGrefine_157:HG3_Ill_MetaSV_63:HG3_Ill_SVrefine2DISCOVARDovetail_172:HG3_PB_SVrefine2Falcon1Dovetail_209:HG3_PB_SVrefine2PBcRDovetail_188:HG4_Ill_GATKHCSBGrefine_183:HG4_Ill_MetaSV_58:HG4_PB_SVrefine2Falcon1Dovetail_206:HG4_PB_SVrefine2PBcRDovetail_172;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0110144;ClusterMaxSizeDiff=0.0110144;ClusterMaxEditDist=0.0110144;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2822;DistBack=12132;DistForward=-1678;DistMin=-1678;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:25158688-25161525;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=41.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:126:1/1:0:5:0:13:1/1:0:16:0:18:1/1:0:47:1/1:2:207:3063:.:.
chr1	26489812	HG4_Ill_GATKHCSBGrefine_190	CTCTTCCTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCCCT	C	20	PASS	ClusterIDs=HG4_PB_HySA_432:HG2_Ill_Krunchall_272:HG2_PB_HySA_554:HG2_PB_assemblyticsPBcR_384:HG2_PB_PB10Xdip_1899:HG2_PB_pbsv_309:HG2_Ill_breakscan11_34:HG4_Ill_MetaSV_61:HG2_Ill_tnscope_11:HG4_PB_pbsv_319:HG4_PB_assemblyticsfalcon_384:HG4_PB_SVrefine2PBcRDovetail_178:HG4_PB_SVrefine2Falcon1Dovetail_210:HG4_Ill_scalpel_192:HG4_Ill_manta_52:HG4_Ill_GATKHCSBGrefine_190:HG4_10X_allpass_21:HG2_PB_SVrefine2PBcRplusDovetail_216:HG2_PB_SVrefine2PB10Xhap12_272:HG2_Ill_scalpel_209:HG2_Ill_manta_48:HG2_Ill_MetaSV_57:HG2_Ill_GATKHCSBGrefine_155:HG2_10X_allpass_22:HG2_10X_SVrefine210Xhap12_216;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_216:HG2_10X_allpass_22:HG2_Ill_GATKHCSBGrefine_155:HG2_Ill_MetaSV_57:HG2_Ill_manta_48:HG2_Ill_scalpel_209:HG2_PB_SVrefine2PB10Xhap12_272:HG2_PB_SVrefine2PBcRplusDovetail_216:HG4_10X_allpass_21:HG4_Ill_GATKHCSBGrefine_190:HG4_Ill_manta_52:HG4_Ill_scalpel_192:HG4_PB_SVrefine2Falcon1Dovetail_210:HG4_PB_SVrefine2PBcRDovetail_178:HG4_PB_assemblyticsfalcon_384:HG4_PB_pbsv_319;NumExactMatchSVs=16;ClusterMaxShiftDist=0.214521;ClusterMaxSizeDiff=0.214521;ClusterMaxEditDist=0.214521;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-339;DistForward=20168;DistMin=-339;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=1:26489813-26490149;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=42.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:30:0|1:21:1:1:28:1|0:0:21:25:0:0/1:28:11:0/1:18:2:.:.:.
chr1	27804112	HG2_Ill_scalpel_218	TTAAAAATAAATAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCTACAGAGCGAGACTCCGTCTCAAAAAAAAAAAATAAATAAATAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_12:HG3_10X_allpass_37:HG2_PB_PB10Xdip_2015:HG3_PB_assemblyticsfalcon_402:HG3_Ill_Krunchall_286:HG2_Ill_Krunchall_285:HG2_PB_assemblyticsPBcR_398:HG2_PB_assemblyticsfalcon_409:HG3_PB_pbsv_321:HG2_PB_SVrefine2Falcon1plusDovetail_220:HG2_PB_pbsv_318:HG3_PB_SVrefine2Falcon1Dovetail_218:HG3_Ill_scalpel_232:HG3_Ill_manta_47:HG3_Ill_GATKHCSBGrefine_165:HG2_PB_SVrefine2PBcRplusDovetail_222:HG2_PB_SVrefine2PB10Xhap12_279:HG2_Ill_scalpel_218:HG2_Ill_SVrefine2DISCOVARplusDovetail_195:HG2_Ill_MetaSV_60:HG2_Ill_GATKHCSBGrefine_161:HG3_Ill_MetaSV_66;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_161:HG2_Ill_MetaSV_60:HG2_Ill_SVrefine2DISCOVARplusDovetail_195:HG2_Ill_scalpel_218:HG2_PB_SVrefine2PB10Xhap12_279:HG2_PB_SVrefine2PBcRplusDovetail_222:HG3_Ill_GATKHCSBGrefine_165:HG3_Ill_manta_47:HG3_Ill_scalpel_232:HG3_PB_SVrefine2Falcon1Dovetail_218;NumExactMatchSVs=10;ClusterMaxShiftDist=0.096124;ClusterMaxSizeDiff=0.096124;ClusterMaxEditDist=0.102644;PBcalls=10;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-329;DistBack=88412;DistForward=-314;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:27804113-27804457;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=44.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:17:0|1:18:1:0:16:0|1:31:0:0:7:0/1:42:26:0/1:29:7:.:.:.
chr1	27935360	HG3_Ill_GATKHC_403	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTCGATACTGTACCTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTCTTCAATACTGTACCTGGGGTATGTGTGTGTGTGTGTGTCTTCGATACTGTACCTGGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_222:HG2_PB_HySA_575:HG4_PB_HySA_442:HG4_PB_pbsv_327:HG3_PB_pbsv_322:HG2_PB_pbsv_319:HG4_PB_SVrefine2PBcRDovetail_184:HG4_Ill_scalpel_194:HG4_Ill_SVrefine2DISCOVARDovetail_170:HG4_Ill_GATKHC_398:HG4_Ill_GATKHCSBGrefine_195:HG4_Ill_250bpfermikitraw_308:HG3_PB_SVrefine2PBcRDovetail_195:HG3_Ill_GATKHC_403:HG3_Ill_GATKHCSBGrefine_167:HG2_PB_SVrefine2PBcRplusDovetail_223:HG2_PB_SVrefine2PB10Xhap12_280:HG2_Ill_scalpel_220:HG2_Ill_manta_51:HG2_Ill_SVrefine2DISCOVARplusDovetail_198:HG2_Ill_GATKHC_378:HG2_Ill_GATKHCSBGrefine_162:HG2_Ill_250bpfermikitraw_306:HG2_Ill_150bpfermikitraw_262:HG4_PB_SVrefine2Falcon1Dovetail_215:HG3_PB_SVrefine2Falcon1Dovetail_219:HG3_Ill_scalpel_233:HG3_Ill_SVrefine2DISCOVARDovetail_184:HG3_Ill_GATKHC_402:HG3_Ill_GATKHCSBGrefine_166:HG2_PB_SVrefine2Falcon1plusDovetail_221;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_262:HG2_Ill_250bpfermikitraw_306:HG2_Ill_GATKHCSBGrefine_162:HG2_Ill_GATKHC_378:HG2_Ill_SVrefine2DISCOVARplusDovetail_198:HG2_Ill_manta_51:HG2_Ill_scalpel_220:HG2_PB_SVrefine2PB10Xhap12_280:HG2_PB_SVrefine2PBcRplusDovetail_223:HG3_Ill_GATKHCSBGrefine_167:HG3_Ill_GATKHC_403:HG3_PB_SVrefine2PBcRDovetail_195:HG4_Ill_250bpfermikitraw_308:HG4_Ill_GATKHCSBGrefine_195:HG4_Ill_GATKHC_398:HG4_Ill_SVrefine2DISCOVARDovetail_170:HG4_Ill_scalpel_194;NumExactMatchSVs=17;ClusterMaxShiftDist=0.095941;ClusterMaxSizeDiff=0.095941;ClusterMaxEditDist=0.095941;PBcalls=12;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-137;DistBack=81832;DistForward=-105;DistMin=-105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=34;REFWIDENED=1:27935361-27935531;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=45.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:45:1/1:1:16:0:14:./.:0:6:0:3:1/1:0:24:./.:.:.:.:.:.
chr1	28179890	HG2_PB_SVrefine2Falcon1plusDovetail_222	GAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGTTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCTGCCCTGTCCAGGAGGGAGGTGGGGGTGTCAGCCCCACGCCCGGCCAGCCGCCTCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCACGCCCGGCCAGCCGCCTCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCACGCCCGGCCAGCCGCCTCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCTCGTCCGGGAGGGAGGTGGGGGGGTC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_222:HG4_Ill_MetaSV_65:HG2_PB_pbsv_320:HG3_PB_pbsv_323:HG4_PB_pbsv_328:HG4_PB_SVrefine2PBcRDovetail_185:HG4_PB_SVrefine2Falcon1Dovetail_216:HG3_PB_SVrefine2PBcRDovetail_196:HG3_PB_SVrefine2Falcon1Dovetail_220:HG2_PB_SVrefine2PBcRplusDovetail_224:HG2_PB_SVrefine2PB10Xhap12_281;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_222:HG4_PB_SVrefine2PBcRDovetail_185:HG4_PB_SVrefine2Falcon1Dovetail_216:HG3_PB_SVrefine2PBcRDovetail_196:HG3_PB_SVrefine2Falcon1Dovetail_220:HG2_PB_SVrefine2PBcRplusDovetail_224:HG2_PB_SVrefine2PB10Xhap12_281;NumExactMatchSVs=7;ClusterMaxShiftDist=0.138776;ClusterMaxSizeDiff=0.138776;ClusterMaxEditDist=0.148208;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-572;DistBack=-1026;DistForward=-350;DistMin=-1026;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=459;REFWIDENED=1:28179891-28180921;PctSeqSimilarity=0.9739;PctSizeSimilarity=0.9983;PctRecOverlap=0.9529;SizeDiff=1;StartDistance=-27;EndDistance=-26;GTMatch=0;TruScore=97;MatchId=46.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:39:1/1:3:26:1:11:./.:2:0:1:0:0/0:18:0:0/1:12:8:.:.:.
chr1	28247799	HG2_Ill_GATKHCSBGrefine_163	TGAAATCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_287:HG3_PB_pbsv_325:HG2_PB_assemblyticsfalcon_416:HG2_PB_assemblyticsPBcR_404:HG4_PB_assemblyticsfalcon_399:HG3_PB_assemblyticsfalcon_409:HG4_Ill_Spiral_21:HG3_PB_HySA_422:HG3_Ill_Spiral_222:HG2_PB_HySA_578:HG2_Ill_Spiral_8:HG2_PB_pbsv_322:HG4_PB_HySA_445:HG4_Ill_MetaSV_68:HG2_Ill_tnscope_13:HG2_Ill_MetaSV_61:HG4_PB_pbsv_330:HG4_PB_SVrefine2PBcRDovetail_187:HG4_PB_SVrefine2Falcon1Dovetail_218:HG4_Ill_manta_54:HG4_Ill_SVrefine2DISCOVARDovetail_173:HG4_Ill_GATKHCSBGrefine_197:HG4_10X_allpass_23:HG3_PB_SVrefine2PBcRDovetail_198:HG3_PB_SVrefine2Falcon1Dovetail_222:HG3_Ill_scalpel_234:HG3_Ill_manta_48:HG3_Ill_SVrefine2DISCOVARDovetail_187:HG3_Ill_GATKHCSBGrefine_168:HG3_10X_allpass_38:HG2_PB_SVrefine2PBcRplusDovetail_226:HG2_PB_SVrefine2PB10Xhap12_283:HG2_PB_SVrefine2Falcon1plusDovetail_224:HG2_Ill_scalpel_221:HG2_Ill_manta_52:HG2_Ill_SVrefine2DISCOVARplusDovetail_202:HG2_Ill_GATKHCSBGrefine_163:HG2_10X_allpass_23:HG2_10X_SVrefine210Xhap12_223:HG2_Ill_breakscan11_35:HG4_Ill_Krunchall_304:HG3_Ill_Krunchall_291:HG2_Ill_Krunchall_288:HG4_Ill_Krunchall_303:HG3_Ill_Krunchall_290;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_223:HG2_10X_allpass_23:HG2_Ill_GATKHCSBGrefine_163:HG2_Ill_SVrefine2DISCOVARplusDovetail_202:HG2_Ill_manta_52:HG2_Ill_scalpel_221:HG2_PB_SVrefine2Falcon1plusDovetail_224:HG2_PB_SVrefine2PB10Xhap12_283:HG2_PB_SVrefine2PBcRplusDovetail_226:HG3_10X_allpass_38:HG3_Ill_GATKHCSBGrefine_168:HG3_Ill_SVrefine2DISCOVARDovetail_187:HG3_Ill_manta_48:HG3_Ill_scalpel_234:HG3_PB_SVrefine2Falcon1Dovetail_222:HG3_PB_SVrefine2PBcRDovetail_198:HG4_10X_allpass_23:HG4_Ill_GATKHCSBGrefine_197:HG4_Ill_SVrefine2DISCOVARDovetail_173:HG4_Ill_manta_54:HG4_PB_SVrefine2Falcon1Dovetail_218:HG4_PB_SVrefine2PBcRDovetail_187:HG4_PB_pbsv_330;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0552846;ClusterMaxSizeDiff=0.0552846;ClusterMaxEditDist=0.214286;PBcalls=17;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=-740;DistForward=-301;DistMin=-740;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=1:28247800-28248116;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=47.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:1/1:1:21:1:8:1/1:0:18:0:9:1/1:1:39:./.:1:10:.:.:.
chr1	30298152	HG3_Ill_GATKHCSBGrefine_174	CGCACACACACACGTACTCACACCCATGCGCACACATACATATTCACACACAT	C	20	PASS	ClusterIDs=HG2_PB_HySA_596:HG3_PB_HySA_440:HG3_PB_assemblyticsfalcon_421:HG2_PB_pbsv_333:HG4_PB_assemblyticsfalcon_408:HG3_PB_pbsv_337:HG3_Ill_svaba_326:HG3_Ill_scalpel_246:HG3_Ill_manta_49:HG3_Ill_Krunchall_302:HG3_Ill_GATKHC_423:HG3_Ill_GATKHCSBGrefine_174:HG3_Ill_FB_205:HG3_Ill_250bpfermikitraw_309:HG3_Ill_150bpfermikitraw_276:HG2_PB_assemblyticsfalcon_427:HG2_Ill_svaba_307:HG2_Ill_scalpel_228:HG2_Ill_manta_53:HG2_Ill_SpiralSDKrefine_212:HG2_Ill_Krunchall_295:HG2_Ill_GATKHC_390:HG2_Ill_GATKHCSBGrefine_166:HG2_Ill_250bpfermikitraw_315;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_315:HG2_Ill_GATKHCSBGrefine_166:HG2_Ill_GATKHC_390:HG2_Ill_Krunchall_295:HG2_Ill_SpiralSDKrefine_212:HG2_Ill_manta_53:HG2_Ill_scalpel_228:HG2_Ill_svaba_307:HG2_PB_assemblyticsfalcon_427:HG3_Ill_150bpfermikitraw_276:HG3_Ill_250bpfermikitraw_309:HG3_Ill_FB_205:HG3_Ill_GATKHCSBGrefine_174:HG3_Ill_GATKHC_423:HG3_Ill_Krunchall_302:HG3_Ill_manta_49:HG3_Ill_scalpel_246:HG3_Ill_svaba_326:HG3_PB_pbsv_337:HG4_PB_assemblyticsfalcon_408;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0970874;ClusterMaxSizeDiff=0.0970874;ClusterMaxEditDist=0.0980392;PBcalls=7;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=12;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=30666;DistForward=9477;DistMin=9477;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=1:30298151-30298213;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=48.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:20:0|1:27:2:4:23:0|1:163:8:7:152:0/1:33:10:./.:.:.:.:.:.
chr1	31040646	HG2_Ill_SVrefine2DISCOVARplusDovetail_214	AAAAACAAGCCTCATCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGTTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCATCCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAAATGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGACAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAATAATAAATCAATAAAAAAATAAATAAATAAATAAATAAATAAATAAATAAAA	G	20	PASS	ClusterIDs=HG2_PB_HySA_604:HG2_PB_PB10Xdip_2048:HG4_10X_allpass_25:HG2_10X_allpass_24:HG4_Ill_Krunchall_318:HG2_Ill_Krunchall_304:HG2_PB_assemblyticsPBcR_422:HG2_PB_pbsv_339:HG2_PB_assemblyticsfalcon_438:HG4_Ill_GATKHCSBGrefine_203:HG2_Ill_GATKHCSBGrefine_170:HG4_PB_pbsv_348:HG2_PB_SVrefine2PBcRplusDovetail_234:HG2_PB_SVrefine2PB10Xhap12_295:HG2_PB_SVrefine2Falcon1plusDovetail_238:HG2_Ill_SVrefine2DISCOVARplusDovetail_214:HG2_10X_SVrefine210Xhap12_241:HG2_Ill_MetaSV_64:HG2_Ill_tnscope_14:HG4_Ill_MetaSV_74;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_241:HG2_Ill_SVrefine2DISCOVARplusDovetail_214:HG2_PB_SVrefine2Falcon1plusDovetail_238:HG2_PB_SVrefine2PB10Xhap12_295:HG2_PB_SVrefine2PBcRplusDovetail_234;NumExactMatchSVs=5;ClusterMaxShiftDist=0.14534;ClusterMaxSizeDiff=0.14534;ClusterMaxEditDist=0.14534;PBcalls=9;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1015;DistBack=43218;DistForward=-1001;DistMin=-1001;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:31040647-31041675;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.999;PctRecOverlap=0.998;SizeDiff=-1;StartDistance=2;EndDistance=1;GTMatch=0;TruScore=99;MatchId=49.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:37:0|1:36:0:2:35:1|0:0:30:46:0:0/1:36:14:0/1:91:45:.:.:.
chr1	31082617	HG2_Ill_SpiralSDKrefine_223	GAGCTGCTGTGAGGGGAGCTTCTGTGGGGGAAACTGCCATGGGGGAGCTGCTGTTGGGGGAGCTGCTGCTGTGAGGGAGCTGCTGTGGGGGGAGCTGCTGTGGGGAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_243:HG2_PB_pbsv_341:HG4_PB_HySA_473:HG4_PB_assemblyticsfalcon_417:HG4_PB_SVrefine2Falcon1Dovetail_229:HG4_Ill_svaba_331:HG4_Ill_scalpel_212:HG4_Ill_manta_57:HG4_Ill_MetaSV_75:HG4_Ill_GATKHC_426:HG4_Ill_GATKHCSBGrefine_204:HG4_Ill_Cortex_45:HG4_10X_allpass_26:HG2_PB_SVrefine2PB10Xhap12_297:HG2_Ill_svaba_321:HG2_Ill_scalpel_238:HG2_Ill_manta_56:HG2_Ill_SpiralSDKrefine_223:HG2_Ill_MetaSV_65:HG2_Ill_GATKHC_404:HG2_Ill_GATKHCSBGrefine_171:HG2_Ill_Cortex_84:HG2_Ill_breakscan11_37:HG4_PB_pbsv_350:HG4_PB_SVrefine2PBcRDovetail_196:HG2_PB_SVrefine2PBcRplusDovetail_235:HG2_PB_SVrefine2PB10Xhap12_296:HG2_Ill_SVrefine2DISCOVARplusDovetail_215;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_Cortex_84:HG2_Ill_GATKHCSBGrefine_171:HG2_Ill_GATKHC_404:HG2_Ill_MetaSV_65:HG2_Ill_SpiralSDKrefine_223:HG2_Ill_manta_56:HG2_Ill_scalpel_238:HG2_Ill_svaba_321:HG2_PB_SVrefine2PB10Xhap12_297:HG4_10X_allpass_26:HG4_Ill_Cortex_45:HG4_Ill_GATKHCSBGrefine_204:HG4_Ill_GATKHC_426:HG4_Ill_MetaSV_75:HG4_Ill_manta_57:HG4_Ill_scalpel_212:HG4_Ill_svaba_331:HG4_PB_SVrefine2Falcon1Dovetail_229:HG4_PB_assemblyticsfalcon_417;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0473934;ClusterMaxSizeDiff=0.0473934;ClusterMaxEditDist=0.143541;PBcalls=9;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-106;DistBack=15447;DistForward=-98;DistMin=-98;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=80;REFWIDENED=1:31082548-31082733;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=50.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:36:0|1:36:2:2:32:./.:1:13:24:0:0/1:16:14:./.:.:.:.:.:.
chr1	31244650	HG4_Ill_SVrefine2DISCOVARDovetail_186	AACTGCAACCTTTTCCCTCACTTTTTTTTTTCCCCTTTGGAGACAGGGTCTCACTCTGTCACCCAGACTGGAGTGCAGTGGTGCGATCACAGCTC	A	20	PASS	ClusterIDs=HG2_PB_HySA_610:HG3_PB_HySA_451:HG2_PB_PB10Xdip_2064:HG2_PB_pbsv_345:HG4_PB_pbsv_353:HG3_PB_assemblyticsfalcon_433:HG2_PB_assemblyticsfalcon_440:HG4_PB_assemblyticsfalcon_422:HG4_PB_SVrefine2Falcon1Dovetail_234:HG4_Ill_svaba_332:HG4_Ill_scalpel_213:HG4_Ill_manta_58:HG4_Ill_SVrefine2DISCOVARDovetail_186:HG4_Ill_Krunchall_320:HG4_Ill_GATKHC_428:HG4_Ill_GATKHCSBGrefine_205:HG4_Ill_250bpfermikitraw_327:HG4_Ill_150bpfermikitraw_306:HG3_PB_pbsv_344:HG3_PB_SVrefine2PBcRDovetail_209:HG3_PB_SVrefine2Falcon1Dovetail_236:HG3_Ill_svaba_338:HG3_Ill_manta_51:HG3_Ill_SVrefine2DISCOVARDovetail_202:HG3_Ill_Krunchall_310:HG3_Ill_GATKHC_433:HG3_Ill_GATKHCSBGrefine_178:HG3_Ill_250bpfermikitraw_319:HG3_Ill_150bpfermikitraw_286:HG2_PB_assemblyticsPBcR_425:HG2_PB_SVrefine2PBcRplusDovetail_237:HG2_PB_SVrefine2PB10Xhap12_300:HG2_PB_SVrefine2Falcon1plusDovetail_241:HG2_Ill_svaba_322:HG2_Ill_scalpel_239:HG2_Ill_manta_57:HG2_Ill_SpiralSDKrefine_224:HG2_Ill_SVrefine2DISCOVARplusDovetail_216:HG2_Ill_Krunchall_306:HG2_Ill_GATKHC_405:HG2_Ill_GATKHCSBGrefine_172:HG2_Ill_250bpfermikitraw_326:HG2_Ill_150bpfermikitraw_277:HG2_10X_SVrefine210Xhap12_245;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_245:HG2_Ill_150bpfermikitraw_277:HG2_Ill_250bpfermikitraw_326:HG2_Ill_GATKHCSBGrefine_172:HG2_Ill_GATKHC_405:HG2_Ill_Krunchall_306:HG2_Ill_SVrefine2DISCOVARplusDovetail_216:HG2_Ill_SpiralSDKrefine_224:HG2_Ill_manta_57:HG2_Ill_scalpel_239:HG2_Ill_svaba_322:HG2_PB_SVrefine2Falcon1plusDovetail_241:HG2_PB_SVrefine2PB10Xhap12_300:HG2_PB_SVrefine2PBcRplusDovetail_237:HG2_PB_assemblyticsPBcR_425:HG3_Ill_150bpfermikitraw_286:HG3_Ill_250bpfermikitraw_319:HG3_Ill_GATKHCSBGrefine_178:HG3_Ill_GATKHC_433:HG3_Ill_Krunchall_310:HG3_Ill_SVrefine2DISCOVARDovetail_202:HG3_Ill_manta_51:HG3_Ill_svaba_338:HG3_PB_SVrefine2Falcon1Dovetail_236:HG3_PB_SVrefine2PBcRDovetail_209:HG3_PB_pbsv_344:HG4_Ill_150bpfermikitraw_306:HG4_Ill_250bpfermikitraw_327:HG4_Ill_GATKHCSBGrefine_205:HG4_Ill_GATKHC_428:HG4_Ill_Krunchall_320:HG4_Ill_SVrefine2DISCOVARDovetail_186:HG4_Ill_manta_58:HG4_Ill_scalpel_213:HG4_Ill_svaba_332:HG4_PB_SVrefine2Falcon1Dovetail_234:HG4_PB_assemblyticsfalcon_422;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0421053;ClusterMaxSizeDiff=0.0421053;ClusterMaxEditDist=0.0425532;PBcalls=16;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-94;DistBack=39429;DistForward=1260;DistMin=1260;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=91;REFWIDENED=1:31244571-31244755;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=51.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:0|1:23:1:2:39:1|0:0:10:23:0:0/1:38:32:./.:.:.:.:.:.
chr1	31649752	HG3_Ill_GATKHCSBGrefine_182	GGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_302:HG2_PB_SVrefine2Falcon1plusDovetail_244:HG2_PB_assemblyticsfalcon_448:HG2_PB_pbsv_350:HG3_PB_pbsv_348:HG4_Ill_GATKHC_434:HG3_Ill_GATKHC_441:HG3_Ill_GATKHCSBGrefine_182:HG3_10X_allpass_40:HG2_Ill_GATKHC_414:HG2_Ill_GATKHCSBGrefine_175:HG4_PB_pbsv_358:HG4_PB_SVrefine2PBcRDovetail_200:HG3_PB_SVrefine2PBcRDovetail_211:HG2_PB_SVrefine2PBcRplusDovetail_239;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_175:HG2_Ill_GATKHC_414:HG3_10X_allpass_40:HG3_Ill_GATKHCSBGrefine_182:HG3_Ill_GATKHC_441:HG4_Ill_GATKHC_434;NumExactMatchSVs=6;ClusterMaxShiftDist=0.015625;ClusterMaxSizeDiff=0.015625;ClusterMaxEditDist=0.0622568;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-127;DistBack=7234;DistForward=-36;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=159;REFWIDENED=1:31649719-31650004;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=52.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:0|1:19:1:4:28:1|0:0:8:16:0:0/1:35:13:./.:.:.:.:.:.
chr1	33156761	HG3_Ill_manta_55	GTGAGCCCAGATCATGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCTTCTCAAAAAACAAAAAAAAACAACAAAAAAAATTTGCCAGGCGTGGCACTGTGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACTGCTTGAACCCGGGAGGTAGAGGTTGCAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_262:HG3_PB_HySA_474:HG2_PB_PB10Xdip_2088:HG2_PB_HySA_638:HG2_Ill_MetaSV_70:HG4_Ill_svaba_340:HG3_Ill_svaba_354:HG3_Ill_scalpel_263:HG3_Ill_manta_55:HG3_Ill_GATKHC_456:HG3_Ill_GATKHCSBGrefine_188:HG2_PB_pbsv_358:HG2_Ill_svaba_335:HG2_Ill_manta_62:HG2_Ill_GATKHC_426:HG2_Ill_GATKHCSBGrefine_179:HG2_10X_allpass_26:HG3_PB_pbsv_359:HG3_PB_SVrefine2PBcRDovetail_219:HG3_Ill_SVrefine2DISCOVARDovetail_221:HG2_PB_SVrefine2PBcRplusDovetail_248:HG2_PB_SVrefine2PB10Xhap12_311:HG2_PB_SVrefine2Falcon1plusDovetail_253;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_26:HG2_Ill_GATKHCSBGrefine_179:HG2_Ill_GATKHC_426:HG2_Ill_manta_62:HG2_Ill_svaba_335:HG2_PB_pbsv_358:HG3_Ill_GATKHCSBGrefine_188:HG3_Ill_GATKHC_456:HG3_Ill_manta_55:HG3_Ill_scalpel_263:HG3_Ill_svaba_354:HG4_Ill_svaba_340;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0393258;ClusterMaxSizeDiff=0.0393258;ClusterMaxEditDist=0.0676056;PBcalls=9;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-177;DistBack=3297;DistForward=-147;DistMin=-147;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=135;REFWIDENED=1:33156689-33157000;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=53.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:41:0|1:27:5:2:28:./.:30:0:1:16:0/1:27:28:./.:.:.:.:.:.
chr1	33439873	HG2_PB_SVrefine2PB10Xhap12_312	CCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAAAAGGGCTCCTCACTTCCCAATAGGGGCAGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGA	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_312:HG2_PB_assemblyticsfalcon_463:HG2_PB_SVrefine2Falcon1plusDovetail_254:HG2_PB_pbsv_359:HG4_PB_pbsv_369:HG4_PB_SVrefine2PBcRDovetail_209:HG2_PB_SVrefine2PBcRplusDovetail_249;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_312:HG4_PB_SVrefine2PBcRDovetail_209:HG2_PB_SVrefine2PBcRplusDovetail_249;NumExactMatchSVs=3;ClusterMaxShiftDist=0.015625;ClusterMaxSizeDiff=0.015625;ClusterMaxEditDist=0.0627451;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-127;DistBack=36131;DistForward=-92;DistMin=-92;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=174;REFWIDENED=1:33439874-33440174;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9375;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=97;MatchId=54.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:23:0|1:15:1:4:21:./.:1:1:2:1:0/1:11:4:./.:.:.:.:.:.
chr1	36679544	HG4_Ill_150bpfermikitraw_329	GAAAGAAAGAAAGAAAGAAGGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAGAAAGAAA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_375:HG2_PB_PB10Xdip_2150:HG2_PB_PB10Xdip_2151:HG4_Ill_Krunchall_348:HG4_Ill_GATKHC_461:HG4_Ill_GATKHCSBGrefine_223:HG4_Ill_250bpfermikitraw_351:HG4_Ill_150bpfermikitraw_329:HG2_Ill_manta_66:HG2_Ill_Krunchall_332:HG2_Ill_GATKHC_443:HG2_Ill_GATKHCSBGrefine_186:HG2_Ill_250bpfermikitraw_354:HG2_Ill_150bpfermikitraw_303:HG2_PB_assemblyticsPBcR_469:HG2_Ill_SpiralSDKrefine_249:HG4_PB_pbsv_386:HG2_PB_assemblyticsfalcon_481;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_303:HG2_Ill_250bpfermikitraw_354:HG2_Ill_GATKHCSBGrefine_186:HG2_Ill_GATKHC_443:HG2_Ill_Krunchall_332:HG2_Ill_manta_66:HG4_Ill_150bpfermikitraw_329:HG4_Ill_250bpfermikitraw_351:HG4_Ill_GATKHCSBGrefine_223:HG4_Ill_GATKHC_461:HG4_Ill_Krunchall_348;NumExactMatchSVs=11;ClusterMaxShiftDist=0.214876;ClusterMaxSizeDiff=0.214876;ClusterMaxEditDist=0.256;PBcalls=6;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=3212;DistForward=20797;DistMin=3212;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:36679543-36679611;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=55.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:25:./.:11:8:5:13:./.:0:13:7:12:0/1:13:39:./.:.:.:.:.:.
chr1	36733251	HG4_PB_SVrefine2Falcon1Dovetail_252	GGAGGCCAGAGCAGATTCTTTTGTTATTTGTTAACTGATACTAGGGCTTGAAAGGAGGTAAGTCAAGAAGAGGTAGGATGGGCTCCCTGCTGGATAGACGGGAGCCCATATTCCCCGCACCCACTCACAGAATACGGGGCATCCGGGGGCTTTCGGAGACTGAGTTCTGTTAGAAAAGGTCTGTTTTACAACTGGGAATCCAAAACATCCAAAGTGAATAGCAGTACTTTTAGAAAGGAATTACCCTA	AAAATTAAAAAACTAACTC	20	PASS	ClusterIDs=HG4_PB_HySA_522:HG2_PB_HySA_661:HG2_Ill_Spiral_11:HG4_PB_SVrefine2PBcRDovetail_220:HG4_PB_assemblyticsfalcon_459:HG4_PB_SVrefine2Falcon1Dovetail_252:HG4_Ill_SVrefine2DISCOVARDovetail_220:HG3_PB_assemblyticsfalcon_468:HG3_PB_SVrefine2PBcRDovetail_231:HG3_PB_SVrefine2Falcon1Dovetail_251:HG3_Ill_SVrefine2DISCOVARDovetail_241:HG2_PB_assemblyticsfalcon_482:HG2_PB_SVrefine2PBcRplusDovetail_261:HG2_PB_SVrefine2PB10Xhap12_325:HG2_PB_SVrefine2Falcon1plusDovetail_266:HG2_10X_SVrefine210Xhap12_281:HG2_PB_PB10Xdip_2153:HG2_PB_PB10Xdip_2152:HG4_Ill_Spiral_24:HG3_Ill_Spiral_265:HG3_Ill_MetaSV_79:HG4_10X_allpass_29:HG2_PB_assemblyticsPBcR_471:HG3_PB_HySA_494:HG4_PB_pbsv_387:HG2_PB_pbsv_376:HG3_PB_pbsv_374:HG4_Ill_Krunchall_350;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_281:HG2_PB_SVrefine2Falcon1plusDovetail_266:HG2_PB_SVrefine2PB10Xhap12_325:HG2_PB_SVrefine2PBcRplusDovetail_261:HG2_PB_assemblyticsfalcon_482:HG3_Ill_SVrefine2DISCOVARDovetail_241:HG3_PB_SVrefine2Falcon1Dovetail_251:HG3_PB_SVrefine2PBcRDovetail_231:HG3_PB_assemblyticsfalcon_468:HG4_Ill_SVrefine2DISCOVARDovetail_220:HG4_PB_SVrefine2Falcon1Dovetail_252:HG4_PB_assemblyticsfalcon_459;NumExactMatchSVs=12;ClusterMaxShiftDist=0.310606;ClusterMaxSizeDiff=0.310606;ClusterMaxEditDist=0.310606;PBcalls=19;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-229;DistBack=-173;DistForward=-248;DistMin=-248;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:36733251-36733498;PctSeqSimilarity=0.9281;PctSizeSimilarity=0.9869;PctRecOverlap=0.9153;SizeDiff=3;StartDistance=-2;EndDistance=19;GTMatch=0;TruScore=94;MatchId=56.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:23:0|1:17:3:0:22:0|1:53:0:0:31:0/1:52:18:./.:.:.:.:.:.
chr1	36749217	HG4_Ill_svaba_358	TGCTGTTTATTTCAGATGAGTATCTAGAATCCTTGTCTTAGATGAATTGATTA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_282:HG4_PB_HySA_523:HG2_PB_HySA_662:HG2_PB_pbsv_377:HG3_PB_pbsv_375:HG4_PB_pbsv_388:HG3_PB_HySA_495:HG4_PB_SVrefine2PBcRDovetail_221:HG4_PB_SVrefine2Falcon1Dovetail_253:HG4_Ill_svaba_358:HG4_Ill_scalpel_241:HG4_Ill_manta_67:HG4_Ill_SVrefine2DISCOVARDovetail_221:HG4_Ill_Krunchall_351:HG4_Ill_GATKHCSBGrefine_228:HG4_Ill_250bpfermikitraw_353:HG4_Ill_150bpfermikitraw_331:HG3_PB_SVrefine2PBcRDovetail_232:HG3_PB_SVrefine2Falcon1Dovetail_252:HG3_Ill_svaba_373:HG3_Ill_scalpel_277:HG3_Ill_manta_56:HG3_Ill_SVrefine2DISCOVARDovetail_242:HG3_Ill_Krunchall_337:HG3_Ill_GATKHCSBGrefine_196:HG3_Ill_250bpfermikitraw_349:HG3_Ill_150bpfermikitraw_316:HG2_PB_SVrefine2PBcRplusDovetail_262:HG2_PB_SVrefine2PB10Xhap12_326:HG2_PB_SVrefine2Falcon1plusDovetail_267:HG2_Ill_svaba_352:HG2_Ill_scalpel_263:HG2_Ill_manta_67:HG2_Ill_SVrefine2DISCOVARplusDovetail_249:HG2_Ill_Krunchall_333:HG2_Ill_GATKHCSBGrefine_191:HG2_Ill_250bpfermikitraw_355:HG2_Ill_150bpfermikitraw_304;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_282:HG4_PB_SVrefine2PBcRDovetail_221:HG4_PB_SVrefine2Falcon1Dovetail_253:HG4_Ill_svaba_358:HG4_Ill_scalpel_241:HG4_Ill_manta_67:HG4_Ill_SVrefine2DISCOVARDovetail_221:HG4_Ill_Krunchall_351:HG4_Ill_GATKHCSBGrefine_228:HG4_Ill_250bpfermikitraw_353:HG4_Ill_150bpfermikitraw_331:HG3_PB_SVrefine2PBcRDovetail_232:HG3_PB_SVrefine2Falcon1Dovetail_252:HG3_Ill_svaba_373:HG3_Ill_scalpel_277:HG3_Ill_manta_56:HG3_Ill_SVrefine2DISCOVARDovetail_242:HG3_Ill_Krunchall_337:HG3_Ill_GATKHCSBGrefine_196:HG3_Ill_250bpfermikitraw_349:HG3_Ill_150bpfermikitraw_316:HG2_PB_SVrefine2PBcRplusDovetail_262:HG2_PB_SVrefine2PB10Xhap12_326:HG2_PB_SVrefine2Falcon1plusDovetail_267:HG2_Ill_svaba_352:HG2_Ill_scalpel_263:HG2_Ill_manta_67:HG2_Ill_SVrefine2DISCOVARplusDovetail_249:HG2_Ill_Krunchall_333:HG2_Ill_GATKHCSBGrefine_191:HG2_Ill_250bpfermikitraw_355:HG2_Ill_150bpfermikitraw_304;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0384615;PBcalls=13;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=14709;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=1:36749218-36749321;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=57.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:2:28:0:31:1/1:0:20:0:16:1/1:0:56:./.:.:.:.:.:.
chr1	37206215	HG3_Ill_150bpfermikitraw_323	TAGGCCCTCAGACAGCAGCTGGGGTCTGGGGCTGAAGCCTCAGCCTCGGGAAGTCCCTCATTATCCCCTCCTGTCCAGCCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_285:HG3_PB_pbsv_382:HG3_PB_HySA_503:HG2_PB_HySA_669:HG2_PB_pbsv_383:HG3_Ill_svaba_379:HG3_Ill_scalpel_281:HG3_Ill_Krunchall_341:HG3_Ill_GATKHCSBGrefine_198:HG3_Ill_250bpfermikitraw_354:HG3_Ill_150bpfermikitraw_323:HG2_PB_assemblyticsfalcon_492:HG2_Ill_svaba_359:HG2_Ill_manta_68:HG2_Ill_SpiralSDKrefine_256:HG2_Ill_Krunchall_339:HG2_Ill_GATKHCSBGrefine_192:HG2_Ill_250bpfermikitraw_360:HG2_Ill_Spiral_12:HG4_PB_SVrefine2Falcon1Dovetail_257:HG3_PB_SVrefine2PBcRDovetail_236:HG3_PB_SVrefine2Falcon1Dovetail_255:HG3_Ill_SVrefine2DISCOVARDovetail_245:HG2_PB_SVrefine2PBcRplusDovetail_264:HG2_PB_SVrefine2PB10Xhap12_329:HG2_Ill_SVrefine2DISCOVARplusDovetail_253;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_360:HG2_Ill_GATKHCSBGrefine_192:HG2_Ill_Krunchall_339:HG2_Ill_SpiralSDKrefine_256:HG2_Ill_manta_68:HG2_Ill_svaba_359:HG2_PB_assemblyticsfalcon_492:HG3_Ill_150bpfermikitraw_323:HG3_Ill_250bpfermikitraw_354:HG3_Ill_GATKHCSBGrefine_198:HG3_Ill_Krunchall_341:HG3_Ill_scalpel_281:HG3_Ill_svaba_379;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0372671;ClusterMaxSizeDiff=0.0372671;ClusterMaxEditDist=0.0745342;PBcalls=10;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-80;DistBack=40042;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=97;REFWIDENED=1:37206200-37206376;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=59.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:0|1:26:1:1:29:0|1:22:0:0:13:0/1:31:12:./.:.:.:.:.:.
chr1	37816477	HG3_Ill_SVrefine2DISCOVARDovetail_248	GACCCTCTCTCTGGGCACCTTTCTCCTCTGTTAGACCAGCATTCCTCTGTAACTCATTTGGTATAAAAGAATTTGTTACCATTGATGAACCTACAATGAAACATCATCACCACCCAGAGTCCACAGTCCATAGTTTGCATCATGGTTCTCTCTGGGTATCCCCATTATAGTATCATACAGAGCATTTTCACTGCCCTAAAGATCTTCTATGCTCTACCTACTCATACCTTCCCACCCTT	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_342:HG2_PB_PB10Xdip_2178:HG2_PB_PB10Xdip_2179:HG2_PB_SVrefine2PB10Xhap12_337:HG2_PB_assemblyticsfalcon_500:HG3_PB_assemblyticsfalcon_478:HG3_PB_SVrefine2Falcon1Dovetail_259:HG4_PB_assemblyticsfalcon_473:HG4_PB_SVrefine2Falcon1Dovetail_262:HG2_PB_SVrefine2PB10Xhap12_336:HG3_PB_pbsv_391:HG2_PB_pbsv_391:HG3_PB_SVrefine2PBcRDovetail_242:HG3_Ill_SVrefine2DISCOVARDovetail_248:HG2_PB_SVrefine2Falcon1plusDovetail_275:HG2_10X_SVrefine210Xhap12_289:HG2_Ill_SpiralSDKrefine_259:HG3_Ill_manta_58:HG2_Ill_manta_69:HG3_Ill_MetaSV_84:HG3_10X_allpass_43:HG3_Ill_Spiral_274:HG2_Ill_Spiral_13:HG3_Ill_scalpel_284:HG2_Ill_scalpel_271:HG3_Ill_Krunchall_344;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_289:HG2_PB_SVrefine2Falcon1plusDovetail_275:HG3_Ill_SVrefine2DISCOVARDovetail_248:HG3_PB_SVrefine2PBcRDovetail_242;NumExactMatchSVs=4;ClusterMaxShiftDist=0.224371;ClusterMaxSizeDiff=0.224371;ClusterMaxEditDist=0.224371;PBcalls=13;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-238;DistBack=-32;DistForward=-205;DistMin=-205;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:37816477-37816715;PctSeqSimilarity=0.9979;PctSizeSimilarity=0.9958;PctRecOverlap=0.9958;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=60.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:33:./.:21:18:10:28:0|1:65:0:0:42:0/1:61:22:./.:.:.:.:.:.
chr1	38077349	HG2_Ill_GATKHCSBGrefine_197	CTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCGTACGCCTA	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_14:HG2_PB_assemblyticsPBcR_488:HG4_PB_pbsv_405:HG4_PB_assemblyticsfalcon_478:HG4_Ill_svaba_371:HG4_Ill_scalpel_250:HG4_Ill_manta_69:HG4_Ill_Krunchall_360:HG4_Ill_GATKHC_481:HG4_Ill_GATKHCSBGrefine_233:HG4_Ill_250bpfermikitraw_365:HG4_Ill_150bpfermikitraw_342:HG4_CG_vcfBeta_189:HG4_10X_allpass_31:HG3_PB_pbsv_393:HG3_PB_assemblyticsfalcon_481:HG3_Ill_svaba_387:HG3_Ill_scalpel_289:HG3_Ill_manta_59:HG3_Ill_Krunchall_350:HG3_Ill_GATKHC_490:HG3_Ill_GATKHCSBGrefine_203:HG3_Ill_250bpfermikitraw_360:HG3_Ill_150bpfermikitraw_329:HG3_CG_vcfBeta_178:HG3_10X_allpass_44:HG2_PB_pbsv_393:HG2_PB_assemblyticsfalcon_503:HG2_Ill_svaba_368:HG2_Ill_scalpel_278:HG2_Ill_manta_70:HG2_Ill_SpiralSDKrefine_262:HG2_Ill_Krunchall_346:HG2_Ill_GATKHC_464:HG2_Ill_GATKHCSBGrefine_197:HG2_Ill_250bpfermikitraw_366:HG2_Ill_150bpfermikitraw_315:HG2_CG_vcfBeta_182:HG2_10X_allpass_30:HG2_Ill_breakscan11_40:HG4_Ill_Spiral_25:HG3_Ill_Spiral_277;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_30:HG2_CG_vcfBeta_182:HG2_Ill_150bpfermikitraw_315:HG2_Ill_250bpfermikitraw_366:HG2_Ill_GATKHCSBGrefine_197:HG2_Ill_GATKHC_464:HG2_Ill_Krunchall_346:HG2_Ill_SpiralSDKrefine_262:HG2_Ill_manta_70:HG2_Ill_scalpel_278:HG2_Ill_svaba_368:HG2_PB_assemblyticsfalcon_503:HG2_PB_pbsv_393:HG3_10X_allpass_44:HG3_CG_vcfBeta_178:HG3_Ill_150bpfermikitraw_329:HG3_Ill_250bpfermikitraw_360:HG3_Ill_GATKHCSBGrefine_203:HG3_Ill_GATKHC_490:HG3_Ill_Krunchall_350:HG3_Ill_manta_59:HG3_Ill_scalpel_289:HG3_Ill_svaba_387:HG3_PB_assemblyticsfalcon_481:HG3_PB_pbsv_393:HG4_10X_allpass_31:HG4_CG_vcfBeta_189:HG4_Ill_150bpfermikitraw_342:HG4_Ill_250bpfermikitraw_365:HG4_Ill_GATKHCSBGrefine_233:HG4_Ill_GATKHC_481:HG4_Ill_Krunchall_360:HG4_Ill_manta_69:HG4_Ill_scalpel_250:HG4_Ill_svaba_371:HG4_PB_assemblyticsfalcon_478:HG4_PB_pbsv_405;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0277778;ClusterMaxSizeDiff=0.0277778;ClusterMaxEditDist=0.027972;PBcalls=7;Illcalls=29;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=25;TenXexactcalls=3;CGexactcalls=3;HG2count=16;HG3count=13;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-71;DistBack=15642;DistForward=75331;DistMin=15642;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:38077348-38077421;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=61.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:1/1:0:23:0:26:1/1:0:17:0:13:1/1:0:48:./.:.:.:.:.:.
chr1	38208245	HG3_PB_assemblyticsfalcon_482	TGAGAATGGCAGAGTGGACAGACAGAAAAAACCTAGGTCCTTGAGGACACTTTTGAGCTGCTGAATGAACCAAGCTTTAACTCTAGCCCTCTTATGTGAGCTAAGAAATCATTTAAGTTAAAGTCAGTTAGGGCCCAGCACTGTGGCTCATGCCTATAATCCCA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_406:HG4_Ill_Krunchall_362:HG3_PB_HySA_511:HG4_Ill_Krunchall_361:HG4_PB_HySA_535:HG2_PB_HySA_685:HG4_PB_assemblyticsfalcon_479:HG4_PB_SVrefine2PBcRDovetail_230:HG4_PB_SVrefine2Falcon1Dovetail_264:HG4_Ill_scalpel_251:HG4_Ill_manta_70:HG4_Ill_SVrefine2DISCOVARDovetail_227:HG4_Ill_MetaSV_85:HG4_Ill_GATKHCSBGrefine_234:HG4_Ill_250bpfermikitraw_366:HG4_Ill_150bpfermikitraw_343:HG4_10X_allpass_32:HG3_PB_assemblyticsfalcon_482:HG3_PB_SVrefine2PBcRDovetail_244:HG3_PB_SVrefine2Falcon1Dovetail_261:HG3_Ill_manta_60:HG3_Ill_SVrefine2DISCOVARDovetail_252:HG3_Ill_MetaSV_86:HG3_Ill_GATKHCSBGrefine_204:HG2_PB_SVrefine2PB10Xhap12_339:HG2_Ill_manta_71:HG2_Ill_breakscan11_41:HG2_Ill_SpiralSDKrefine_263:HG2_Ill_SVrefine2DISCOVARplusDovetail_259:HG2_Ill_MetaSV_79:HG2_Ill_GATKHCSBGrefine_198:HG2_10X_SVrefine210Xhap12_290:HG3_PB_pbsv_394:HG2_PB_pbsv_394;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_290:HG2_Ill_GATKHCSBGrefine_198:HG2_Ill_MetaSV_79:HG2_Ill_SVrefine2DISCOVARplusDovetail_259:HG2_Ill_SpiralSDKrefine_263:HG2_Ill_breakscan11_41:HG2_Ill_manta_71:HG2_PB_SVrefine2PB10Xhap12_339:HG3_Ill_GATKHCSBGrefine_204:HG3_Ill_MetaSV_86:HG3_Ill_SVrefine2DISCOVARDovetail_252:HG3_Ill_manta_60:HG3_PB_SVrefine2Falcon1Dovetail_261:HG3_PB_SVrefine2PBcRDovetail_244:HG3_PB_assemblyticsfalcon_482:HG4_10X_allpass_32:HG4_Ill_150bpfermikitraw_343:HG4_Ill_250bpfermikitraw_366:HG4_Ill_GATKHCSBGrefine_234:HG4_Ill_MetaSV_85:HG4_Ill_SVrefine2DISCOVARDovetail_227:HG4_Ill_manta_70:HG4_Ill_scalpel_251:HG4_PB_SVrefine2Falcon1Dovetail_264:HG4_PB_SVrefine2PBcRDovetail_230:HG4_PB_assemblyticsfalcon_479;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0122324;ClusterMaxSizeDiff=0.0121951;ClusterMaxEditDist=0.0366972;PBcalls=13;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-163;DistBack=9709;DistForward=-162;DistMin=-162;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:38208246-38208411;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=62.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:0|1:24:2:0:29:1|0:0:32:54:0:0/1:30:18:./.:.:.:.:.:.
chr1	39084043	HG3_Ill_SVrefine2DISCOVARDovetail_259	AGGCCAGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGAGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACTGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCGGGCGTGATGGTACATGCCTGTAATCCCAGCTACTCGGGGGGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCGGTGAGCCAAGATCATGTCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCCATCTCAAAAAAAAAAAAATAATTTTCTTGGTTTGGGCAGGGATGGTCTTTAAGCCCCACTTTCCCTTCATCCAGAAACTCCATTTATATCTGATTTACATTTTCAGTTTCCATTAAATAAAGGAGTCTATAATTTTTAAAAATATAAGAACTACTGGTTTACTCATAGGTACGGTGGTTTAAGATATTTATAAAGTGACATGAATATTGATTGACTTCACAATGTCTTATTTAAAGTGCAAAAAAGGAAAGTAGTCATTGATAGTATCTTTAAAAGAAATTCATCTGAACTGGCCAATCATCAGATTCTAACAAGATAAAATAATGATTAAAAATAATAATGTTAATAATAATTAGCATGTATTTAGAAAGTACTATATGTTAGGGACTCCTCAAAGTACTTTAGAGGAATTAATTCATTTGATTGTCCCCATAACGCTGTGAGGCAGGTACAGAGCATTCACAAGAGGTGATTCACACGGGGTCATGCACTAAGGTTAAGCAGCACCAACTAACTGCACAAAGGAGGGCTGGATCTGCAGAGAAACTGTAGATAATAATGAAAGGAAAGGAGTTCTGATAGACCCCATGCATCATCTCAGTTGGCAGAGTGATAATGCCACCAAATAAGTAGGAATTGGGATGACTCTAACATCCAGTTGTGACTCCCTGGCTGTTTGAGCTTGAGAACGGTGGGCAGATAGGAGCAGATCAAGTGACTGCAAAGTCCCCTTCGAAGTCAGAGTTTCTGTAGTTTCCATTTAGAGATGGAGGGTCTTCTGAACAACCCAGGCTTTGAGCACACAGGACATACAAGGAGGGTTGGGGTTGCAACAGCTTCATCATAATCACCAATTGAACCTCCACTGGGAAGAAATGAATAGTTCATGCAAATGAGAGCTTGAGATTTGCTCATACTAGGCTTGAGAGAGAAACAGAAGGAGAAAATGGCAAAGTTTGAATAAACTCTTAGGATAAATTCCACCATAAAGATATTGTATAACTCTTTAGGGAAGATAGTTATCCAACATTTCAGAAGCACTCAGTTGTCTACAAACAGTATTTATGTTTCCATTTATTATATCAATCTTCATGATTCTATTCATTAGTGCAAATCCCTGCAGACCTGCCCTGGCTCCATGCCTTCAGTCAGCTTGTCTTTACTCAGCTGCCTCCTGGTGTCAGACACTACGCTGGGCTCTAGAGGATGCAGTGGTAAAATAAAAGCATGGAACACTCATTTTAGATTGGCACTGACCAATACCGTAACTACTAGCCAATGTGGCTATTTAAATTCAGATTTTAATTAGTTAAAAGCAAGTAAAATT	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_263:HG2_10X_allpass_31:HG2_PB_pbsv_399:HG3_PB_HySA_523:HG3_PB_pbsv_397:HG3_Ill_MetaSV_87:HG3_10X_allpass_46:HG2_Ill_SpiralSDKrefine_267:HG2_Ill_MetaSV_80:HG2_PB_HySA_690:HG2_Ill_tnscope_18:HG4_PB_SVrefine2Falcon1Dovetail_267:HG3_PB_SVrefine2PBcRDovetail_247:HG3_Ill_SVrefine2DISCOVARDovetail_259:HG2_PB_SVrefine2PB10Xhap12_343:HG2_PB_SVrefine2Falcon1plusDovetail_279;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_263:HG4_PB_SVrefine2Falcon1Dovetail_267:HG3_PB_SVrefine2PBcRDovetail_247:HG3_Ill_SVrefine2DISCOVARDovetail_259:HG2_PB_SVrefine2PB10Xhap12_343:HG2_PB_SVrefine2Falcon1plusDovetail_279;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0802589;ClusterMaxSizeDiff=0.0802589;ClusterMaxEditDist=0.0841969;PBcalls=8;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-1604;DistBack=22108;DistForward=-1502;DistMin=-1502;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=295;REFWIDENED=1:39084044-39085942;PctSeqSimilarity=0.9497;PctSizeSimilarity=1;PctRecOverlap=0.8891;SizeDiff=0;StartDistance=-178;EndDistance=-178;GTMatch=0;TruScore=94;MatchId=63.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:37:./.:21:31:9:7:./.:45:0:17:2:0/0:82:1:0/1:155:53:1523:.:.
chr1	40474047	HG2_Ill_GATKHCSBGrefine_202	ACAGAGCGAGACCCTATCTCAAAAAATAAAATAAAATAAAAAGTAATAGCCATTCTCAGGCATGGTGGCTCACATCTGCAATCCCATGCTTTGAGCTATGATTGTGCCACTGCACTTCAGCCTG	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_507:HG2_PB_pbsv_407:HG4_PB_pbsv_417:HG4_Ill_GATKHCSBGrefine_239:HG2_Ill_GATKHCSBGrefine_202:HG2_PB_SVrefine2PBcRplusDovetail_280:HG2_PB_SVrefine2PB10Xhap12_352:HG4_PB_SVrefine2PBcRDovetail_236;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_202:HG4_Ill_GATKHCSBGrefine_239;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0398406;ClusterMaxSizeDiff=0.0395257;ClusterMaxEditDist=0.0557769;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-123;DistBack=4253;DistForward=-75;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=140;REFWIDENED=1:40474005-40474267;PctSeqSimilarity=0.9711;PctSizeSimilarity=0.9609;PctRecOverlap=0.7054;SizeDiff=-5;StartDistance=38;EndDistance=33;GTMatch=0;TruScore=87;MatchId=64.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:0|1:27:1:1:18:./.:14:1:30:1:./.:56:6:./.:.:.:.:.:.
chr1	41024252	HG2_PB_SVrefine2PB10Xhap12_356	CAGATTAGCTAGATACAGAGTGCTGATTGGTGCATTTACAAACCTTAAGCTACACACAGAGTGCTGATTGGTGTATTTGCAATCCTTTAGCTAGACATAAAGGTTCTCCAAGTCCCCACT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_287:HG2_PB_HySA_710:HG2_PB_PB10Xdip_2252:HG2_PB_SVrefine2PB10Xhap12_357:HG3_PB_pbsv_406:HG3_PB_SVrefine2PBcRDovetail_252:HG3_Ill_scalpel_314:HG3_Ill_GATKHC_519:HG3_Ill_GATKHCSBGrefine_214:HG2_PB_assemblyticsPBcR_511:HG2_PB_SVrefine2PBcRplusDovetail_283:HG2_PB_SVrefine2PB10Xhap12_356:HG2_Ill_scalpel_295:HG2_Ill_SpiralSDKrefine_279:HG2_Ill_GATKHC_487:HG2_Ill_GATKHCSBGrefine_204:HG2_10X_allpass_32:HG2_10X_SVrefine210Xhap12_306:HG2_PB_pbsv_410;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_306:HG2_10X_allpass_32:HG2_Ill_GATKHCSBGrefine_204:HG2_Ill_GATKHC_487:HG2_Ill_SpiralSDKrefine_279:HG2_Ill_scalpel_295:HG2_PB_SVrefine2PB10Xhap12_356:HG2_PB_SVrefine2PBcRplusDovetail_283:HG2_PB_assemblyticsPBcR_511:HG3_Ill_GATKHCSBGrefine_214:HG3_Ill_GATKHC_519:HG3_Ill_scalpel_314:HG3_PB_SVrefine2PBcRDovetail_252;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0508475;ClusterMaxSizeDiff=0.0508475;ClusterMaxEditDist=0.144681;PBcalls=10;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-119;DistBack=61472;DistForward=-115;DistMin=-115;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=236;REFWIDENED=1:41024139-41024493;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=65.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:22:0|1:20:0:4:23:0|1:35:0:0:9:0/1:43:18:./.:.:.:.:.:.
chr1	42101212	HG3_Ill_Krunchall_385	TGTATGTATATATACATACATATACATACGTATGTATATATACATACATATACATACGTATGTATATATACATACATATACATAC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_413:HG2_PB_HySA_723:HG4_PB_assemblyticsfalcon_511:HG2_PB_pbsv_415:HG4_PB_pbsv_427:HG4_Ill_GATKHC_510:HG4_Ill_GATKHCSBGrefine_250:HG3_Ill_GATKHC_533:HG3_Ill_GATKHCSBGrefine_218:HG2_Ill_GATKHC_499:HG2_Ill_GATKHCSBGrefine_208:HG4_Ill_manta_75:HG4_Ill_250bpfermikitraw_391:HG4_Ill_150bpfermikitraw_371:HG3_PB_assemblyticsfalcon_511:HG3_PB_HySA_543:HG3_Ill_manta_64:HG3_Ill_Krunchall_385:HG3_Ill_250bpfermikitraw_394:HG3_Ill_150bpfermikitraw_361:HG2_PB_assemblyticsfalcon_542:HG2_Ill_manta_74:HG2_Ill_SpiralSDKrefine_285:HG2_Ill_Krunchall_375:HG2_Ill_250bpfermikitraw_397:HG2_Ill_150bpfermikitraw_345;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_345:HG2_Ill_250bpfermikitraw_397:HG2_Ill_Krunchall_375:HG2_Ill_SpiralSDKrefine_285:HG2_Ill_manta_74:HG2_PB_assemblyticsfalcon_542:HG3_Ill_150bpfermikitraw_361:HG3_Ill_250bpfermikitraw_394:HG3_Ill_Krunchall_385:HG3_Ill_manta_64:HG3_PB_HySA_543:HG3_PB_assemblyticsfalcon_511:HG4_Ill_150bpfermikitraw_371:HG4_Ill_250bpfermikitraw_391:HG4_Ill_manta_75;NumExactMatchSVs=15;ClusterMaxShiftDist=0.192771;ClusterMaxSizeDiff=0.192771;ClusterMaxEditDist=0.320988;PBcalls=8;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-84;DistBack=61836;DistForward=2656;DistMin=2656;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=110;REFWIDENED=1:42101152-42101345;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=66.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:25:0|1:23:1:2:28:0|1:36:1:1:19:0/1:42:13:./.:.:.:.:.:.
chr1	42632299	HG4_Ill_SVrefine2DISCOVARDovetail_249	TGTGCGTGTGTGTGCCGAGGTGTGTGTATACACTGAGGTGCATGTATGCGCTGAGGTGTGTGTGTGCTGACGTGTGTGAGTGCTGACGTGTGTGTATACACTGAGGTGCGTATGTGTGCTGAGGTGCGTATGTGTGCTGAGGTGTGTGTGTGCTGACGTGTGTGTATACACTGAGGTGTGTGTGTGTGCTGAGGTGTGTGTGTGTGCTGAGCTGTGTGTGTGCTGATGTGTGTGTATACACTGAGGTGTGTGTGAGTGCTGATGTGTGTGTATACACTGAGGAGCGTGTGTGTGCTGAGGTATGTGTGCGCTGATGTGTGTGTATACACTGAG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_281:HG2_PB_pbsv_418:HG3_PB_pbsv_416:HG4_PB_SVrefine2Falcon1Dovetail_278:HG4_Ill_SVrefine2DISCOVARDovetail_249:HG3_PB_SVrefine2PBcRDovetail_258:HG2_PB_SVrefine2PBcRplusDovetail_289:HG2_PB_SVrefine2PB10Xhap12_364;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_281:HG4_PB_SVrefine2Falcon1Dovetail_278:HG4_Ill_SVrefine2DISCOVARDovetail_249:HG3_PB_SVrefine2PBcRDovetail_258:HG2_PB_SVrefine2PBcRplusDovetail_289:HG2_PB_SVrefine2PB10Xhap12_364;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0492308;ClusterMaxSizeDiff=0.0492308;ClusterMaxEditDist=0.129231;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-332;DistBack=-87;DistForward=-297;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=509;REFWIDENED=1:42632300-42633140;PctSeqSimilarity=0.8921;PctSizeSimilarity=0.9608;PctRecOverlap=0.4685;SizeDiff=13;StartDistance=-177;EndDistance=-164;GTMatch=0;TruScore=77;MatchId=67.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:29:./.:20:10:3:14:0/0:57:3:60:1:0/0:32:0:0/0:36:1:.:.:.
chr1	43571985	HG3_PB_SVrefine2Falcon1Dovetail_273	AATCTGCCCCCATGATCCAATCACCTCCCAGTGTGTCCAGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAATGAAGCCGTGGACACTCGCGGTGAGTGTTACAGTTCTTAAAGGCGGCGTGTCCAGAGTTTGTTCCTTTTGATGTGTGGATGTGTTTGGAGTTTCTTCCTTCTGGTGGGTTCGTGTTCTCGCTGGCTCAGGAGTGAAGCTGCAGGCCTTTGTGGTGAGTGTTACAGCTCTTAAGGCGGCGCGTCTGGAGTTGTTTTTTCCTCCCGGTGGGTTCGTAGTCTCAATGGCTTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAGTGTTACAGCTCATAAAGGCAGTGTGGACCCAAAGAGTGAGCAGCAGCAAGATTTATATCAAAGAGTGAAAGAACAAAGTTTCCACAGTGTGGAAGGGGACTGGAGCTGGTTGCCACTGCTGGCTGGCACAGCCTGCTTTTATTCTCTTATCTGGCCCCACCCACATCCTGCTGATTGGTCCATTTTACAGAGAGCCAATTGGTATGTTTTACAGAGAGCTGATTGGTCCGTTTTGACAGGGTGCTGATTGGTGCGTTTACAATCCCTGAGCTAGACACAAAAGTTCTCCGTGTCCCCACTAGATTAGCTAGATACAGAGTGTCAAATGGTGTATTTACAAACCCTGAGCTAGACACAGAGTGCTGATTGGTGCATTTACAAACCTTGAGCTAGATACAGAGCGCCAATTGGTGCATTCACAATCCCTT	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_538:HG4_Ill_Krunchall_398:HG2_Ill_Krunchall_392:HG2_PB_pbsv_425:HG4_PB_HySA_584:HG2_PB_HySA_744:HG3_PB_assemblyticsfalcon_520:HG4_PB_pbsv_435:HG4_PB_SVrefine2PBcRDovetail_245:HG4_Ill_GATKHCSBGrefine_257:HG4_10X_allpass_34:HG3_PB_SVrefine2Falcon1Dovetail_273:HG2_PB_assemblyticsfalcon_558:HG2_PB_SVrefine2PB10Xhap12_370:HG2_Ill_SpiralSDKrefine_290:HG2_Ill_MetaSV_89:HG2_10X_allpass_33:HG2_10X_SVrefine210Xhap12_315:HG4_Ill_Spiral_28:HG4_Ill_MetaSV_93:HG2_Ill_tnscope_20:HG2_Ill_Spiral_15:HG2_PB_SVrefine2PBcRplusDovetail_293;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_315:HG2_10X_allpass_33:HG2_Ill_MetaSV_89:HG2_Ill_SpiralSDKrefine_290:HG2_PB_SVrefine2PB10Xhap12_370:HG2_PB_assemblyticsfalcon_558:HG3_PB_SVrefine2Falcon1Dovetail_273:HG4_10X_allpass_34:HG4_Ill_GATKHCSBGrefine_257:HG4_PB_SVrefine2PBcRDovetail_245:HG4_PB_pbsv_435;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00782779;ClusterMaxSizeDiff=0.00782779;ClusterMaxEditDist=0.0208741;PBcalls=11;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-761;DistBack=9222;DistForward=-733;DistMin=-733;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:43562735-43580213;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=68.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:29:./.:8:24:18:3:1|0:0:31:61:0:0/1:47:9:0/1:56:14:.:.:.
chr1	44565518	HG2_Ill_Krunchall_395	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_427:HG2_PB_assemblyticsfalcon_564:HG3_Ill_GATKHC_558:HG3_Ill_GATKHCSBGrefine_227:HG2_Ill_GATKHC_522:HG2_Ill_GATKHCSBGrefine_217:HG4_PB_assemblyticsfalcon_526:HG3_PB_assemblyticsfalcon_525:HG3_10X_allpass_52:HG2_10X_allpass_34:HG3_Ill_Krunchall_398:HG3_Ill_250bpfermikitraw_412:HG3_Ill_150bpfermikitraw_374:HG2_Ill_Krunchall_395:HG2_Ill_250bpfermikitraw_415:HG2_Ill_150bpfermikitraw_359:HG2_Ill_manta_79:HG2_PB_pbsv_429;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_359:HG2_Ill_250bpfermikitraw_415:HG2_Ill_Krunchall_395:HG3_Ill_150bpfermikitraw_374:HG3_Ill_250bpfermikitraw_412:HG3_Ill_Krunchall_398;NumExactMatchSVs=6;ClusterMaxShiftDist=0.147059;ClusterMaxSizeDiff=0.147059;ClusterMaxEditDist=0.147059;PBcalls=5;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=-67;DistBack=6774;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:44565517-44565588;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9853;PctRecOverlap=0.8841;SizeDiff=-1;StartDistance=-7;EndDistance=-8;GTMatch=0;TruScore=95;MatchId=69.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:16:0|1:27:3:0:19:0|1:24:0:1:28:0/1:24:10:./.:.:.:.:.:.
chr1	44605947	HG3_Ill_GATKHC_561	TAGTGGAGGTCATCACTTGCTCTCCACAGAGGTTCTGGTTACCAGTGGAGGTCGTCATCTGCCCTCCACAGAGGGCTTGGTTACC	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_418:HG2_PB_pbsv_430:HG3_PB_pbsv_429:HG3_Ill_GATKHC_561:HG3_Ill_GATKHCSBGrefine_228:HG3_Ill_250bpfermikitraw_416:HG2_Ill_GATKHC_525;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_418:HG3_Ill_GATKHC_561:HG3_Ill_GATKHCSBGrefine_228:HG3_Ill_250bpfermikitraw_416:HG2_Ill_GATKHC_525;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0119048;ClusterMaxSizeDiff=0.0118343;ClusterMaxEditDist=0.0238095;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-84;DistBack=849;DistForward=-53;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=1:44605946-44606084;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=70.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:18:0|1:19:3:5:18:./.:5:0:0:2:0/1:16:12:./.:.:.:.:.:.
chr1	46366107	HG2_Ill_GATKHCSBGrefine_219	TGATGTTGGATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_21:HG2_10X_allpass_36:HG3_10X_allpass_56:HG2_PB_assemblyticsfalcon_577:HG2_PB_assemblyticsPBcR_556:HG4_Ill_Krunchall_405:HG3_Ill_Krunchall_411:HG2_PB_HySA_768:HG4_PB_pbsv_451:HG4_Ill_MetaSV_98:HG3_Ill_MetaSV_100:HG2_Ill_MetaSV_94:HG4_PB_SVrefine2PBcRDovetail_254:HG4_PB_SVrefine2Falcon1Dovetail_293:HG4_Ill_scalpel_287:HG4_Ill_manta_79:HG4_Ill_SVrefine2DISCOVARDovetail_267:HG4_Ill_GATKHCSBGrefine_261:HG4_10X_allpass_35:HG3_PB_pbsv_443:HG3_PB_SVrefine2PBcRDovetail_273:HG3_PB_SVrefine2Falcon1Dovetail_280:HG3_Ill_scalpel_344:HG3_Ill_manta_67:HG3_Ill_GATKHCSBGrefine_233:HG2_PB_pbsv_440:HG2_PB_SVrefine2PBcRplusDovetail_302:HG2_PB_SVrefine2Falcon1plusDovetail_305:HG2_Ill_scalpel_322:HG2_Ill_manta_81:HG2_Ill_breakscan11_45:HG2_Ill_SpiralSDKrefine_303:HG2_Ill_SVrefine2DISCOVARplusDovetail_306:HG2_Ill_GATKHCSBGrefine_219:HG2_10X_SVrefine210Xhap12_327;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_327:HG2_Ill_GATKHCSBGrefine_219:HG2_Ill_SVrefine2DISCOVARplusDovetail_306:HG2_Ill_SpiralSDKrefine_303:HG2_Ill_breakscan11_45:HG2_Ill_manta_81:HG2_Ill_scalpel_322:HG2_PB_SVrefine2Falcon1plusDovetail_305:HG2_PB_SVrefine2PBcRplusDovetail_302:HG2_PB_pbsv_440:HG3_Ill_GATKHCSBGrefine_233:HG3_Ill_manta_67:HG3_Ill_scalpel_344:HG3_PB_SVrefine2Falcon1Dovetail_280:HG3_PB_SVrefine2PBcRDovetail_273:HG3_PB_pbsv_443:HG4_10X_allpass_35:HG4_Ill_GATKHCSBGrefine_261:HG4_Ill_SVrefine2DISCOVARDovetail_267:HG4_Ill_manta_79:HG4_Ill_scalpel_287:HG4_PB_SVrefine2Falcon1Dovetail_293:HG4_PB_SVrefine2PBcRDovetail_254;NumExactMatchSVs=23;ClusterMaxShiftDist=0.118012;ClusterMaxSizeDiff=0.118012;ClusterMaxEditDist=0.118012;PBcalls=12;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-330;DistForward=-318;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:46366108-46366454;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=71.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:40:0|1:25:3:1:38:1|0:0:24:33:0:0/1:19:20:0/1:20:8:.:.:.
chr1	49549776	HG3_Ill_150bpfermikitraw_401	GAGTCTCTAGGAAGTTCCAAATTTCCCCACATCTTCCTGTCTTCCGAGCCCTCCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_335:HG4_PB_pbsv_463:HG2_PB_pbsv_451:HG2_PB_HySA_800:HG3_PB_HySA_611:HG3_PB_pbsv_455:HG4_PB_HySA_617:HG4_PB_SVrefine2PBcRDovetail_261:HG4_PB_SVrefine2Falcon1Dovetail_302:HG4_Ill_svaba_436:HG4_Ill_manta_81:HG4_Ill_SVrefine2DISCOVARDovetail_274:HG4_Ill_Krunchall_426:HG4_Ill_GATKHC_561:HG4_Ill_GATKHCSBGrefine_265:HG4_Ill_250bpfermikitraw_428:HG4_Ill_150bpfermikitraw_406:HG3_PB_SVrefine2PBcRDovetail_278:HG3_PB_SVrefine2Falcon1Dovetail_287:HG3_Ill_svaba_471:HG3_Ill_SVrefine2DISCOVARDovetail_300:HG3_Ill_Krunchall_429:HG3_Ill_GATKHC_603:HG3_Ill_GATKHCSBGrefine_238:HG3_Ill_250bpfermikitraw_438:HG3_Ill_150bpfermikitraw_401:HG3_10X_allpass_58:HG2_PB_assemblyticsfalcon_601:HG2_PB_SVrefine2PBcRplusDovetail_308:HG2_PB_SVrefine2PB10Xhap12_392:HG2_Ill_svaba_443:HG2_Ill_manta_83:HG2_Ill_SVrefine2DISCOVARplusDovetail_315:HG2_Ill_Krunchall_418:HG2_Ill_GATKHC_559:HG2_Ill_GATKHCSBGrefine_222:HG2_Ill_250bpfermikitraw_441:HG2_Ill_150bpfermikitraw_384;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_335:HG4_PB_SVrefine2PBcRDovetail_261:HG4_PB_SVrefine2Falcon1Dovetail_302:HG4_Ill_svaba_436:HG4_Ill_manta_81:HG4_Ill_SVrefine2DISCOVARDovetail_274:HG4_Ill_Krunchall_426:HG4_Ill_GATKHC_561:HG4_Ill_GATKHCSBGrefine_265:HG4_Ill_250bpfermikitraw_428:HG4_Ill_150bpfermikitraw_406:HG3_PB_SVrefine2PBcRDovetail_278:HG3_PB_SVrefine2Falcon1Dovetail_287:HG3_Ill_svaba_471:HG3_Ill_SVrefine2DISCOVARDovetail_300:HG3_Ill_Krunchall_429:HG3_Ill_GATKHC_603:HG3_Ill_GATKHCSBGrefine_238:HG3_Ill_250bpfermikitraw_438:HG3_Ill_150bpfermikitraw_401:HG3_10X_allpass_58:HG2_PB_assemblyticsfalcon_601:HG2_PB_SVrefine2PBcRplusDovetail_308:HG2_PB_SVrefine2PB10Xhap12_392:HG2_Ill_svaba_443:HG2_Ill_manta_83:HG2_Ill_SVrefine2DISCOVARplusDovetail_315:HG2_Ill_Krunchall_418:HG2_Ill_GATKHC_559:HG2_Ill_GATKHCSBGrefine_222:HG2_Ill_250bpfermikitraw_441:HG2_Ill_150bpfermikitraw_384;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0540541;PBcalls=13;Illcalls=23;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=23;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=33509;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=55;REFWIDENED=1:49549777-49549885;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=73.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:./.:1:44:0:3:1/1:0:15:0:11:1/1:0:47:./.:.:.:.:.:.
chr1	55334337	HG3_Ill_Krunchall_457	CATTAACAGTGATGGTTATGAAGGCAATGTAATAGTTCTAATAAAAGATGGAT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_490:HG3_PB_HySA_649:HG2_PB_HySA_850:HG4_Ill_svaba_472:HG4_Ill_scalpel_318:HG4_Ill_manta_88:HG4_Ill_Krunchall_463:HG4_Ill_GATKHC_611:HG4_Ill_GATKHCSBGrefine_279:HG4_Ill_Cortex_64:HG4_Ill_250bpfermikitraw_462:HG4_Ill_150bpfermikitraw_439:HG3_PB_pbsv_479:HG3_Ill_svaba_494:HG3_Ill_scalpel_384:HG3_Ill_manta_73:HG3_Ill_Krunchall_457:HG3_Ill_GATKHC_642:HG3_Ill_GATKHCSBGrefine_249:HG3_Ill_Cortex_78:HG3_Ill_250bpfermikitraw_463:HG3_Ill_150bpfermikitraw_425:HG2_PB_pbsv_476:HG2_Ill_svaba_471:HG2_Ill_scalpel_355:HG2_Ill_manta_89:HG2_Ill_Krunchall_444:HG2_Ill_GATKHC_600:HG2_Ill_GATKHCSBGrefine_232:HG2_Ill_Cortex_128:HG2_Ill_250bpfermikitraw_467:HG2_Ill_150bpfermikitraw_410:HG2_PB_assemblyticsPBcR_622:HG2_Ill_breakscan11_48;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_410:HG2_Ill_250bpfermikitraw_467:HG2_Ill_Cortex_128:HG2_Ill_GATKHCSBGrefine_232:HG2_Ill_GATKHC_600:HG2_Ill_Krunchall_444:HG2_Ill_manta_89:HG2_Ill_scalpel_355:HG2_Ill_svaba_471:HG2_PB_pbsv_476:HG3_Ill_150bpfermikitraw_425:HG3_Ill_250bpfermikitraw_463:HG3_Ill_Cortex_78:HG3_Ill_GATKHCSBGrefine_249:HG3_Ill_GATKHC_642:HG3_Ill_Krunchall_457:HG3_Ill_manta_73:HG3_Ill_scalpel_384:HG3_Ill_svaba_494:HG3_PB_pbsv_479:HG4_Ill_150bpfermikitraw_439:HG4_Ill_250bpfermikitraw_462:HG4_Ill_Cortex_64:HG4_Ill_GATKHCSBGrefine_279:HG4_Ill_GATKHC_611:HG4_Ill_Krunchall_463:HG4_Ill_manta_88:HG4_Ill_scalpel_318:HG4_Ill_svaba_472;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0188679;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0943396;PBcalls=6;Illcalls=28;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=27;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=32357;DistForward=2105;DistMin=2105;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=48;REFWIDENED=1:55334321-55334420;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=74.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:33:0|1:20:1:2:31:0|1:34:0:0:20:0/1:32:26:./.:.:.:.:.:.
chr1	56401282	HG2_10X_allpass_39	TAGAAATATAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_49:HG4_Ill_Krunchall_476:HG3_Ill_Krunchall_473:HG2_Ill_Krunchall_456:HG2_PB_assemblyticsPBcR_636:HG4_PB_assemblyticsfalcon_619:HG2_PB_assemblyticsfalcon_655:HG4_Ill_Spiral_31:HG3_PB_HySA_674:HG3_Ill_Spiral_380:HG2_Ill_Spiral_16:HG4_PB_pbsv_500:HG2_PB_HySA_871:HG4_Ill_MetaSV_107:HG2_Ill_tnscope_24:HG2_Ill_MetaSV_103:HG4_PB_SVrefine2PBcRDovetail_281:HG4_PB_SVrefine2Falcon1Dovetail_323:HG4_Ill_scalpel_324:HG4_Ill_manta_89:HG4_Ill_SVrefine2DISCOVARDovetail_300:HG4_Ill_GATKHCSBGrefine_284:HG4_10X_allpass_41:HG3_PB_pbsv_489:HG3_PB_SVrefine2PBcRDovetail_296:HG3_PB_SVrefine2Falcon1Dovetail_308:HG3_Ill_scalpel_395:HG3_Ill_manta_74:HG3_Ill_SVrefine2DISCOVARDovetail_326:HG3_Ill_GATKHCSBGrefine_252:HG3_10X_allpass_61:HG2_PB_pbsv_487:HG2_PB_SVrefine2PBcRplusDovetail_327:HG2_PB_SVrefine2PB10Xhap12_415:HG2_PB_SVrefine2Falcon1plusDovetail_336:HG2_Ill_scalpel_362:HG2_Ill_manta_93:HG2_Ill_SVrefine2DISCOVARplusDovetail_341:HG2_Ill_GATKHCSBGrefine_235:HG2_10X_allpass_39:HG2_10X_SVrefine210Xhap12_355:HG4_PB_HySA_664;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_355:HG2_10X_allpass_39:HG2_Ill_GATKHCSBGrefine_235:HG2_Ill_SVrefine2DISCOVARplusDovetail_341:HG2_Ill_manta_93:HG2_Ill_scalpel_362:HG2_PB_SVrefine2Falcon1plusDovetail_336:HG2_PB_SVrefine2PB10Xhap12_415:HG2_PB_SVrefine2PBcRplusDovetail_327:HG2_PB_pbsv_487:HG3_10X_allpass_61:HG3_Ill_GATKHCSBGrefine_252:HG3_Ill_SVrefine2DISCOVARDovetail_326:HG3_Ill_manta_74:HG3_Ill_scalpel_395:HG3_PB_SVrefine2Falcon1Dovetail_308:HG3_PB_SVrefine2PBcRDovetail_296:HG3_PB_pbsv_489:HG4_10X_allpass_41:HG4_Ill_GATKHCSBGrefine_284:HG4_Ill_SVrefine2DISCOVARDovetail_300:HG4_Ill_manta_89:HG4_Ill_scalpel_324:HG4_PB_SVrefine2Falcon1Dovetail_323:HG4_PB_SVrefine2PBcRDovetail_281;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0661417;ClusterMaxSizeDiff=0.0661417;ClusterMaxEditDist=0.0661417;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=34840;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=1:56401283-56401614;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=75.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:0:31:0:22:1/1:0:19:0:21:1/1:0:34:0/1:3:14:.:.:.
chr1	56831106	HG2_10X_SVrefine210Xhap12_356	TAAAAAGAACCACTGCCTCGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATGTGGAGAAAGCTGAAACTGGATCTCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAATGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATATTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_108:HG2_PB_assemblyticsfalcon_656:HG4_PB_assemblyticsfalcon_620:HG3_PB_assemblyticsfalcon_617:HG3_10X_allpass_62:HG4_10X_allpass_42:HG2_10X_allpass_40:HG4_Ill_Krunchall_478:HG2_Ill_Krunchall_457:HG2_PB_assemblyticsPBcR_637:HG4_PB_pbsv_501:HG2_Ill_tnscope_25:HG4_PB_SVrefine2PBcRDovetail_282:HG4_Ill_SVrefine2DISCOVARDovetail_303:HG4_Ill_GATKHCSBGrefine_285:HG3_PB_pbsv_491:HG3_PB_SVrefine2PBcRDovetail_298:HG3_Ill_SVrefine2DISCOVARDovetail_327:HG3_Ill_GATKHCSBGrefine_253:HG2_PB_pbsv_488:HG2_PB_SVrefine2PBcRplusDovetail_328:HG2_PB_SVrefine2PB10Xhap12_416:HG2_PB_SVrefine2Falcon1plusDovetail_337:HG2_Ill_SVrefine2DISCOVARplusDovetail_343:HG2_Ill_MetaSV_104:HG2_Ill_GATKHCSBGrefine_236:HG2_10X_SVrefine210Xhap12_356:HG4_PB_SVrefine2Falcon1Dovetail_324:HG3_PB_SVrefine2Falcon1Dovetail_310:HG2_Ill_breakscan11_50;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_356:HG2_Ill_GATKHCSBGrefine_236:HG2_Ill_MetaSV_104:HG2_Ill_SVrefine2DISCOVARplusDovetail_343:HG2_PB_SVrefine2Falcon1plusDovetail_337:HG2_PB_SVrefine2PB10Xhap12_416:HG2_PB_SVrefine2PBcRplusDovetail_328:HG2_PB_pbsv_488:HG3_Ill_GATKHCSBGrefine_253:HG3_Ill_SVrefine2DISCOVARDovetail_327:HG3_PB_SVrefine2PBcRDovetail_298:HG3_PB_pbsv_491:HG4_Ill_GATKHCSBGrefine_285:HG4_Ill_SVrefine2DISCOVARDovetail_303:HG4_PB_SVrefine2PBcRDovetail_282;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0494205;ClusterMaxSizeDiff=0.0494205;ClusterMaxEditDist=0.0494205;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3855;DistBack=16830;DistForward=-3837;DistMin=-3837;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:56831107-56834979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=76.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:70:0|1:37:2:0:36:0|1:60:0:0:45:0/1:26:13:0/1:272:150:3966:.:.
chr1	56887702	HG3_PB_SVrefine2PBcRDovetail_299	TTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_417:HG4_PB_assemblyticsfalcon_622:HG3_PB_assemblyticsfalcon_619:HG3_Ill_Krunchall_476:HG2_Ill_Krunchall_459:HG3_Ill_Spiral_382:HG3_PB_pbsv_492:HG4_PB_pbsv_502:HG2_PB_HySA_873:HG4_PB_SVrefine2PBcRDovetail_283:HG4_PB_SVrefine2Falcon1Dovetail_325:HG4_Ill_manta_90:HG4_Ill_SVrefine2DISCOVARDovetail_304:HG4_Ill_GATKHCSBGrefine_286:HG4_10X_allpass_43:HG3_PB_SVrefine2PBcRDovetail_299:HG3_PB_SVrefine2Falcon1Dovetail_311:HG3_Ill_scalpel_399:HG3_Ill_manta_75:HG3_Ill_SVrefine2DISCOVARDovetail_328:HG3_Ill_GATKHCSBGrefine_254:HG3_10X_allpass_63:HG2_PB_pbsv_489:HG2_Ill_scalpel_364:HG2_Ill_manta_94:HG2_Ill_SVrefine2DISCOVARplusDovetail_344:HG2_Ill_MetaSV_105:HG2_Ill_GATKHCSBGrefine_237:HG2_10X_allpass_41:HG2_10X_SVrefine210Xhap12_357:HG4_Ill_MetaSV_109:HG2_Ill_tnscope_26:HG2_Ill_breakscan11_51:HG2_PB_PB10Xdip_2426;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_357:HG2_10X_allpass_41:HG2_Ill_GATKHCSBGrefine_237:HG2_Ill_MetaSV_105:HG2_Ill_SVrefine2DISCOVARplusDovetail_344:HG2_Ill_manta_94:HG2_Ill_scalpel_364:HG2_PB_pbsv_489:HG3_10X_allpass_63:HG3_Ill_GATKHCSBGrefine_254:HG3_Ill_SVrefine2DISCOVARDovetail_328:HG3_Ill_manta_75:HG3_Ill_scalpel_399:HG3_PB_SVrefine2Falcon1Dovetail_311:HG3_PB_SVrefine2PBcRDovetail_299:HG4_10X_allpass_43:HG4_Ill_GATKHCSBGrefine_286:HG4_Ill_SVrefine2DISCOVARDovetail_304:HG4_Ill_manta_90:HG4_PB_SVrefine2Falcon1Dovetail_325:HG4_PB_SVrefine2PBcRDovetail_283;NumExactMatchSVs=21;ClusterMaxShiftDist=0.066561;ClusterMaxSizeDiff=0.066561;ClusterMaxEditDist=0.0699523;PBcalls=12;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-302;DistForward=48748;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=1:56887703-56888028;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=77.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:21:0|1:35:7:3:17:0|1:25:0:0:24:0/1:21:18:0/1:32:8:.:.:.
chr1	57242607	HG3_Ill_scalpel_400	TAGAAAATAGAAGGCCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGGGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_17:HG3_PB_HySA_681:HG4_Ill_Krunchall_484:HG3_Ill_Krunchall_478:HG2_PB_assemblyticsPBcR_639:HG4_PB_assemblyticsfalcon_625:HG3_PB_assemblyticsfalcon_620:HG2_PB_assemblyticsfalcon_659:HG3_PB_pbsv_494:HG2_Ill_tnscope_27:HG2_Ill_MetaSV_106:HG4_PB_pbsv_504:HG4_PB_SVrefine2Falcon1Dovetail_326:HG4_Ill_SVrefine2DISCOVARDovetail_306:HG4_Ill_MetaSV_110:HG4_Ill_GATKHCSBGrefine_287:HG4_10X_allpass_44:HG3_PB_SVrefine2PBcRDovetail_300:HG3_PB_SVrefine2Falcon1Dovetail_313:HG3_Ill_scalpel_400:HG3_Ill_SVrefine2DISCOVARDovetail_331:HG3_Ill_GATKHCSBGrefine_255:HG3_10X_allpass_64:HG2_PB_pbsv_491:HG2_PB_SVrefine2PBcRplusDovetail_329:HG2_PB_SVrefine2PB10Xhap12_419:HG2_PB_SVrefine2Falcon1plusDovetail_339:HG2_PB_HySA_876:HG2_Ill_scalpel_365:HG2_Ill_manta_95:HG2_Ill_breakscan11_52:HG2_Ill_SVrefine2DISCOVARplusDovetail_347:HG2_Ill_GATKHCSBGrefine_238:HG2_10X_allpass_42:HG2_10X_SVrefine210Xhap12_359;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_359:HG2_10X_allpass_42:HG2_Ill_GATKHCSBGrefine_238:HG2_Ill_SVrefine2DISCOVARplusDovetail_347:HG2_Ill_breakscan11_52:HG2_Ill_manta_95:HG2_Ill_scalpel_365:HG2_PB_HySA_876:HG2_PB_SVrefine2Falcon1plusDovetail_339:HG2_PB_SVrefine2PB10Xhap12_419:HG2_PB_SVrefine2PBcRplusDovetail_329:HG2_PB_pbsv_491:HG3_10X_allpass_64:HG3_Ill_GATKHCSBGrefine_255:HG3_Ill_SVrefine2DISCOVARDovetail_331:HG3_Ill_scalpel_400:HG3_PB_SVrefine2Falcon1Dovetail_313:HG3_PB_SVrefine2PBcRDovetail_300:HG4_10X_allpass_44:HG4_Ill_GATKHCSBGrefine_287:HG4_Ill_MetaSV_110:HG4_Ill_SVrefine2DISCOVARDovetail_306:HG4_PB_SVrefine2Falcon1Dovetail_326:HG4_PB_pbsv_504;NumExactMatchSVs=24;ClusterMaxShiftDist=0.105581;ClusterMaxSizeDiff=0.105581;ClusterMaxEditDist=0.105581;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=19198;DistForward=80430;DistMin=19198;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:57242608-57242964;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=78.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:27:0:24:1/1:0:28:0:27:1/1:0:40:./.:2:9:.:.:.
chr1	57861398	HG2_PB_SVrefine2PB10Xhap12_421	ATCCCATGGCTACCATATTAGGGAATACAGACCTATAGCATTCTTAAGTATAGAGGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_362:HG3_PB_HySA_683:HG2_PB_HySA_878:HG3_PB_pbsv_495:HG2_PB_pbsv_493:HG3_Ill_svaba_511:HG3_Ill_scalpel_401:HG3_Ill_manta_76:HG3_Ill_Krunchall_481:HG3_Ill_GATKHCSBGrefine_256:HG3_Ill_250bpfermikitraw_487:HG3_Ill_150bpfermikitraw_446:HG3_10X_allpass_65:HG2_PB_SVrefine2PBcRplusDovetail_331:HG2_PB_SVrefine2PB10Xhap12_421:HG2_PB_SVrefine2Falcon1plusDovetail_341:HG2_Ill_svaba_485:HG2_Ill_scalpel_366:HG2_Ill_manta_96:HG2_Ill_SpiralSDKrefine_359:HG2_Ill_GATKHCSBGrefine_239:HG2_Ill_250bpfermikitraw_489:HG2_Ill_150bpfermikitraw_426;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_362:HG3_Ill_svaba_511:HG3_Ill_scalpel_401:HG3_Ill_manta_76:HG3_Ill_Krunchall_481:HG3_Ill_GATKHCSBGrefine_256:HG3_Ill_250bpfermikitraw_487:HG3_Ill_150bpfermikitraw_446:HG3_10X_allpass_65:HG2_PB_SVrefine2PBcRplusDovetail_331:HG2_PB_SVrefine2PB10Xhap12_421:HG2_PB_SVrefine2Falcon1plusDovetail_341:HG2_Ill_svaba_485:HG2_Ill_scalpel_366:HG2_Ill_manta_96:HG2_Ill_SpiralSDKrefine_359:HG2_Ill_GATKHCSBGrefine_239:HG2_Ill_250bpfermikitraw_489:HG2_Ill_150bpfermikitraw_426;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0357143;PBcalls=7;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=3913;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=57;REFWIDENED=1:57861399-57861511;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=79.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:0|1:30:0:2:32:1|0:0:16:27:1:0/1:25:25:./.:.:.:.:.:.
chr1	58343211	HG2_Ill_MetaSV_107	TGATTTATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCGCGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGTCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_364:HG4_10X_allpass_45:HG2_10X_allpass_43:HG2_PB_SVrefine2PB10Xhap12_425:HG4_PB_assemblyticsfalcon_631:HG3_PB_assemblyticsfalcon_625:HG2_PB_assemblyticsPBcR_647:HG4_Ill_Krunchall_491:HG2_Ill_Krunchall_466:HG4_PB_pbsv_510:HG4_Ill_Spiral_32:HG2_Ill_Spiral_18:HG2_PB_pbsv_497:HG2_PB_HySA_884:HG4_Ill_MetaSV_111:HG2_Ill_tnscope_28:HG2_Ill_breakscan11_53:HG4_PB_SVrefine2PBcRDovetail_287:HG4_PB_SVrefine2Falcon1Dovetail_330:HG4_Ill_scalpel_332:HG4_Ill_manta_91:HG4_Ill_SVrefine2DISCOVARDovetail_311:HG4_Ill_GATKHCSBGrefine_289:HG3_PB_SVrefine2Falcon1Dovetail_317:HG2_PB_SVrefine2PBcRplusDovetail_333:HG2_PB_SVrefine2PB10Xhap12_424:HG2_Ill_scalpel_371:HG2_Ill_SVrefine2DISCOVARplusDovetail_352:HG2_Ill_MetaSV_107:HG2_Ill_GATKHCSBGrefine_241;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_364:HG4_PB_SVrefine2PBcRDovetail_287:HG4_PB_SVrefine2Falcon1Dovetail_330:HG4_Ill_scalpel_332:HG4_Ill_manta_91:HG4_Ill_SVrefine2DISCOVARDovetail_311:HG4_Ill_GATKHCSBGrefine_289:HG3_PB_SVrefine2Falcon1Dovetail_317:HG2_PB_SVrefine2PBcRplusDovetail_333:HG2_PB_SVrefine2PB10Xhap12_424:HG2_Ill_scalpel_371:HG2_Ill_SVrefine2DISCOVARplusDovetail_352:HG2_Ill_MetaSV_107:HG2_Ill_GATKHCSBGrefine_241;NumExactMatchSVs=14;ClusterMaxShiftDist=0.108025;ClusterMaxSizeDiff=0.108025;ClusterMaxEditDist=0.108025;PBcalls=12;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=96912;DistForward=37274;DistMin=37274;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=1:58343212-58343547;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=80.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:19:1:1:20:0|1:47:0:0:23:0/1:32:26:0/1:29:14:.:.:.
chr1	58743909	HG3_PB_SVrefine2Falcon1Dovetail_318	CACACGCATACTGTCTCTCGCCTGCTGCCATGTAAGATGTGCCTGCTTCACCTTCTGCCATGATTGTAAGTTTCCTGAGGCCTCTCCAGCCATGTGGAACTGTGGATCAATTAAACCTCTTTCCTTTATAAATTACCCAGTCTCAGATGTTTCTTTTATAGCAATGTGAGAACAGACTAATACAAAGGCCCAGCTCAAATGTTCCCTGCCATATGAAGCTTTCCTTGATTTTATGGGCAGTCACTCCTAGTTCTTTGTGCCCACAGCATTCTCTTATTATCTCTATCATAGCATTTACTGCACCGTTTTGAAATGTATTAATTTACTTGTCTGCATCTCTTACTAGGCAGGGCTAGAAGAGTGTGACCCTTTATTTGGGATACAGAATCAGGCGGTGCACCAGTTAAGGTAAAGCAAACTGCTCTAACAAAATTGGAAATGATCCAGCATATGATTTTCAACCAGATTTTCCTGATCAGCAGCAGGCGGGGGGGGCCTGTGCTCCATACAGTCATTCAGGGACGAATCTGATTAAAATTCTGCCATTTTCATGGCATCCAAGATCTCCTTCATCAAGTCAGCAGGTGAGTGAAAAAATAACTAAGAAGGCACACTTTTCCCTAACCACTTCAGGCCAGAAGGGGCAAACGAAGGTCTCTCTTCATATCTCACTGGAGAGAACTGAGCATGTGGCCCCTCCTGGAGAAGGAGAAGGATTAGAAACTAAGCCCTGGCCTAGAAGCCACTTTCCAGTGATGATTCTACACTGCAGAAAAGGAGCAGAGATCTTTGGAGGACAGCTGGCCATCTCTACCAAGGGTAACAAAAATGGACTCTTTAGACACAAACCTACCCTACTCAGGAGGTAAATAGTGAATTTCTACCTGAAGCTTTCTGGTAAGTTCAGCATTTAG	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_54:HG2_10X_allpass_44:HG2_PB_assemblyticsPBcR_650:HG4_Ill_Krunchall_493:HG3_Ill_Krunchall_487:HG4_PB_assemblyticsfalcon_635:HG3_PB_assemblyticsfalcon_628:HG2_PB_assemblyticsfalcon_670:HG4_PB_pbsv_512:HG2_Ill_tnscope_29:HG4_PB_SVrefine2PBcRDovetail_288:HG4_PB_SVrefine2Falcon1Dovetail_331:HG4_Ill_manta_92:HG4_Ill_SVrefine2DISCOVARDovetail_313:HG4_Ill_MetaSV_112:HG4_Ill_GATKHCSBGrefine_290:HG4_10X_allpass_46:HG3_PB_pbsv_498:HG3_PB_SVrefine2PBcRDovetail_302:HG3_PB_SVrefine2Falcon1Dovetail_318:HG3_Ill_manta_77:HG3_Ill_SVrefine2DISCOVARDovetail_336:HG3_Ill_GATKHCSBGrefine_258:HG3_10X_allpass_66:HG2_PB_pbsv_498:HG2_PB_SVrefine2PBcRplusDovetail_334:HG2_PB_SVrefine2PB10Xhap12_426:HG2_PB_SVrefine2Falcon1plusDovetail_342:HG2_Ill_manta_97:HG2_Ill_SpiralSDKrefine_364:HG2_Ill_SVrefine2DISCOVARplusDovetail_356:HG2_Ill_MetaSV_108:HG2_Ill_GATKHCSBGrefine_242:HG2_10X_SVrefine210Xhap12_365;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_365:HG2_Ill_GATKHCSBGrefine_242:HG2_Ill_MetaSV_108:HG2_Ill_SVrefine2DISCOVARplusDovetail_356:HG2_Ill_SpiralSDKrefine_364:HG2_Ill_manta_97:HG2_PB_SVrefine2Falcon1plusDovetail_342:HG2_PB_SVrefine2PB10Xhap12_426:HG2_PB_SVrefine2PBcRplusDovetail_334:HG2_PB_pbsv_498:HG3_10X_allpass_66:HG3_Ill_GATKHCSBGrefine_258:HG3_Ill_SVrefine2DISCOVARDovetail_336:HG3_Ill_manta_77:HG3_PB_SVrefine2Falcon1Dovetail_318:HG3_PB_SVrefine2PBcRDovetail_302:HG3_PB_pbsv_498:HG4_10X_allpass_46:HG4_Ill_GATKHCSBGrefine_290:HG4_Ill_MetaSV_112:HG4_Ill_SVrefine2DISCOVARDovetail_313:HG4_Ill_manta_92:HG4_PB_SVrefine2Falcon1Dovetail_331:HG4_PB_SVrefine2PBcRDovetail_288;NumExactMatchSVs=24;ClusterMaxShiftDist=0.00878156;ClusterMaxSizeDiff=0.00878156;ClusterMaxEditDist=0.00878156;PBcalls=14;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-913;DistBack=59211;DistForward=-910;DistMin=-910;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=1:58743910-58744826;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=81.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:1:29:0:24:1/1:0:29:0:28:1/1:0:38:./.:3:54:892:.:.
chr1	59017788	HG2_PB_SVrefine2PB10Xhap12_427	GTGTTGTTCCTTGGCCAGGCACAGTGGCTCACGCCTGTAATCCCAGCAACTTGGGACGCTGAGGTGGGCAGATCACTTGAGGTCAGGAGTTTGAGATCAGCCTGGCCAACATGGTGAAGCCCCTGTCTCTACTAAAAATACACACATACACACACACACACAAACACACACACACACACACACACACACAGAGATTAGATAGGCATGGCGGCTCGTGCCTATAGTCCCAGCTACTCGGGAGGCTGAAGCAGAAGAAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_367:HG3_Ill_GATKHCSBGrefine_259:HG3_10X_allpass_67:HG2_Ill_GATKHCSBGrefine_243:HG3_PB_pbsv_499:HG2_PB_pbsv_499:HG2_PB_HySA_889:HG3_PB_SVrefine2PBcRDovetail_303:HG3_PB_SVrefine2Falcon1Dovetail_319:HG2_PB_SVrefine2PB10Xhap12_427:HG2_PB_SVrefine2Falcon1plusDovetail_343:HG2_Ill_SVrefine2DISCOVARplusDovetail_360;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_367:HG3_PB_SVrefine2PBcRDovetail_303:HG3_PB_SVrefine2Falcon1Dovetail_319:HG2_PB_SVrefine2PB10Xhap12_427:HG2_PB_SVrefine2Falcon1plusDovetail_343:HG2_Ill_SVrefine2DISCOVARplusDovetail_360;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0311284;ClusterMaxSizeDiff=0.0311284;ClusterMaxEditDist=0.0428016;PBcalls=7;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-256;DistBack=4756;DistForward=-61;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=260;REFWIDENED=1:59017789-59018304;PctSeqSimilarity=0.9669;PctSizeSimilarity=0.9697;PctRecOverlap=0.4189;SizeDiff=-8;StartDistance=-146;EndDistance=-154;GTMatch=0;TruScore=78;MatchId=82.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:31:./.:19:12:7:18:./.:11:2:29:1:./.:15:2:./.:.:.:.:.:.
chr1	59059616	HG2_Ill_SpiralSDKrefine_366	AATCATTTGAATTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_368:HG3_Ill_Krunchall_491:HG2_Ill_Krunchall_471:HG3_Ill_Spiral_392:HG2_Ill_Spiral_19:HG2_Ill_breakscan11_55:HG3_PB_pbsv_500:HG3_PB_HySA_692:HG2_PB_pbsv_500:HG3_PB_SVrefine2PBcRDovetail_304:HG3_Ill_scalpel_410:HG3_Ill_manta_78:HG3_Ill_SVrefine2DISCOVARDovetail_337:HG3_Ill_GATKHCSBGrefine_260:HG3_10X_allpass_68:HG2_PB_SVrefine2PB10Xhap12_428:HG2_Ill_scalpel_374:HG2_Ill_manta_98:HG2_Ill_SpiralSDKrefine_366:HG2_Ill_GATKHCSBGrefine_244:HG2_10X_allpass_45;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_368:HG3_PB_SVrefine2PBcRDovetail_304:HG3_Ill_scalpel_410:HG3_Ill_manta_78:HG3_Ill_SVrefine2DISCOVARDovetail_337:HG3_Ill_GATKHCSBGrefine_260:HG3_10X_allpass_68:HG2_PB_SVrefine2PB10Xhap12_428:HG2_Ill_scalpel_374:HG2_Ill_manta_98:HG2_Ill_SpiralSDKrefine_366:HG2_Ill_GATKHCSBGrefine_244:HG2_10X_allpass_45;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00613497;ClusterMaxSizeDiff=0.00613497;ClusterMaxEditDist=0.00615385;PBcalls=5;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-326;DistForward=-309;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:59059617-59059959;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=83.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:17:0|1:22:0:0:24:1|0:0:16:35:0:0/1:19:16:0/1:23:4:.:.:.
chr1	62082857	HG3_PB_SVrefine2PBcRDovetail_311	TCTTCTTTTACTTTAGAATTGAAAAATGATAGTGGCCCTGGACCATCAGCAGCCATCTTTCTCCCCTCATGAAAAGAGCACATCCATGGATTTAACTTAACATTAGAGGAGGTACAATGAGAATATGGAAATAGAGCCTAAATAATTTTATTTTGCCCCTAGATCTAGCATATGAGAAGCAAATATGTTCTGCATTTCCCAGTTTATAAGCCAATAAATTCTCCTTTGTGCTTAAAGCATTCGAGTTACATTCTGACACTTGCAACCAAGAATCCTGACAAATACATCTTTGGAATTTGTATCTCCTCTGAATTACAGTGACTGGTACATAGGACTCAAAAATATGTACATAGGACTGGTACATAGTACAGTGACTGGTACATAGGACTTAAAAATATGTTACATGGATGAATGAACAGCTTAGCAAAAGGTCTGGGAATGACCTCTGCGTAAAGTGAATTTCTGCTGCCCCCAAAACTGCCTAGTGTGTGCTGTTCATCAACAATGCACCCACTTCTTGCACTTTGATGTAGAGAGGCCATACCACCTGTGTCTACATGTGGTTACTACTTAAACAATACTTACATAGTTAGCGAGTGGCCAAAATGTCTATTAATCTGTAAACACTTGGAAAGAATCCAGTTTGTATTCTTATTTTCCTGGTTTAAAGTGCTAAATGAACCAAAAGTTAGGGAAGCTCTTTTCAGAAAAGCCATCATGCCTGATCCAATCCACTGAACAAAAGATTTAGGAGCTCTCCATCTGATATTAGTCTTTGGAATAGCCTTGACTTAAGTGTGCTTGAGCCTGTGACTGTGGGTGAAAGTGTGTGAGCGATGATTTTC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_56:HG4_PB_assemblyticsfalcon_655:HG3_PB_assemblyticsfalcon_653:HG2_PB_assemblyticsfalcon_693:HG4_10X_allpass_49:HG4_Ill_Krunchall_522:HG3_Ill_Krunchall_516:HG2_Ill_Krunchall_497:HG2_PB_assemblyticsPBcR_675:HG3_PB_pbsv_509:HG2_PB_HySA_920:HG2_Ill_tnscope_30:HG4_PB_pbsv_524:HG4_PB_SVrefine2PBcRDovetail_294:HG4_PB_SVrefine2Falcon1Dovetail_340:HG4_Ill_manta_96:HG4_Ill_SVrefine2DISCOVARDovetail_325:HG4_Ill_MetaSV_116:HG3_PB_SVrefine2PBcRDovetail_311:HG3_PB_SVrefine2Falcon1Dovetail_328:HG3_Ill_manta_80:HG3_Ill_GATKHCSBGrefine_268:HG3_10X_allpass_70:HG2_PB_pbsv_510:HG2_PB_SVrefine2PBcRplusDovetail_341:HG2_PB_SVrefine2PB10Xhap12_436:HG2_PB_SVrefine2Falcon1plusDovetail_351:HG2_Ill_manta_102:HG2_Ill_SpiralSDKrefine_379:HG2_Ill_SVrefine2DISCOVARplusDovetail_370:HG2_Ill_MetaSV_111:HG2_Ill_GATKHCSBGrefine_255:HG2_10X_allpass_46:HG2_10X_SVrefine210Xhap12_377:HG4_Ill_Spiral_33:HG3_Ill_Spiral_411:HG2_Ill_Spiral_20;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_377:HG2_10X_allpass_46:HG2_Ill_GATKHCSBGrefine_255:HG2_Ill_MetaSV_111:HG2_Ill_SVrefine2DISCOVARplusDovetail_370:HG2_Ill_SpiralSDKrefine_379:HG2_Ill_manta_102:HG2_PB_SVrefine2Falcon1plusDovetail_351:HG2_PB_SVrefine2PB10Xhap12_436:HG2_PB_SVrefine2PBcRplusDovetail_341:HG2_PB_pbsv_510:HG3_10X_allpass_70:HG3_Ill_GATKHCSBGrefine_268:HG3_Ill_manta_80:HG3_PB_SVrefine2Falcon1Dovetail_328:HG3_PB_SVrefine2PBcRDovetail_311:HG4_Ill_MetaSV_116:HG4_Ill_SVrefine2DISCOVARDovetail_325:HG4_Ill_manta_96:HG4_PB_SVrefine2Falcon1Dovetail_340:HG4_PB_SVrefine2PBcRDovetail_294:HG4_PB_pbsv_524;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0580046;ClusterMaxSizeDiff=0.0580046;ClusterMaxEditDist=0.0580046;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-844;DistBack=730;DistForward=-838;DistMin=-838;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=1:62082858-62083707;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=84.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:85:1/1:6:39:1:28:1/1:0:18:1:25:1/1:0:42:1/1:2:37:.:.:.
chr1	62113413	HG2_PB_pbsv_511	GGGCTTGAGTATCAGAAGATTTTGGTATCTGAGGGGGTCCTGGAACCAATCCCCTGAGAATATCGAGGGAGGATCATTCAATAAAGTACAATGCTAGAGGAAGTCCAAAGTTATGTTGGGAGCATTGTGTGAGGGCACCTAACTTCATCTACAGATCAAAAAAACTTTCCTGAGAAAGTGATATTTAGATTGATAAGAATTTGCAAATAGTGAAGGAAGAGCATTTCAGGCAGAGGGAACAGCATGTTTGAAGGCATGGAGGTGAGAGAAAATTTAGATATTTAACAAATATTTACTGAGTTTTCCCATTGCCAGGCTCTGTATTGGGTGGAAGACCCTGGCACGGAGGAGACTACACCAGGGGACACAGATATGGGAGCAAATGACTTCAAAATAATGTGGTAGGAGCTCTAACAGTGGTCAGCACCGGGCACCAGAGGAGCACTGAAGAGATTGCCTAATCCATCCCAGAAGGGATGGTATTGGAGCTGAGCCTTGACAGACGAGTGAGAATAAAGAAGGAGATGTGGCAAGGTGGGAGACCTGGTCCTTGCCTCTATGGACATAGTCTAGTGGGGAAGTTGGCAAGCTGACTGTATAATACTGATTATAGTGCAGTACAATAAGTGTCTAGGAACAGTGCCTAGCACATAGTAGGCACTTATTAAATATCTGTTGAATAAATTAATGTATAAATGCTGTATAATACTGATTATAGCGCAGAACAATAAGTGTCTGGGAACAGTGTCTGGCACATAGTAGGCACTCGTTAAATATGTGCTGAATAAATGAATGTATAAATGCTGTATGATACTGATTATCATAGAGCACAAAAACTGTCTGGGAACAGTGTCTGGCACATAGTAGGCATTCATTAAACATGTGTTGAATGAATGAATTTATAAATGCTGTGCTAGCGGTGGATACAATCAGGTAGTCCTAGAAACAATTGGGTACTAAATTAAGAGTTACCAACTCCAAGTGCCCATAGAGCTCAGAGCACAAAGAGCTCCAAAAGGGTGAAACATGAACCAGACTTGAAGGAAGGATCAACTCTGTGGGATGAAGGTCGGTAGACATTCATCCTGAGAAGGAAAAACTACCATTGACACCGCTAGAAGTAAAGGGCGAAGAAAACAGGAAATGAGCACAAAGCAGGATTTCTTAATCCAGGGTCCATGGTACTTCTGGGGCTTCTATGAAACCCCAGAGATTATAAGCAAAATCCTAGGTATGTATGAGAAAGGTTATTTTACTGGGGAAAAAGACTAGAACTTTCGTGAAATAGTCAAAGGAATCCAATAAGCCTAAGTAGGTCAAGACTGTCTCGGGGAGAACAGTTAACCTACTTCAGATAGCCTGTGAATCACTTCATTCGTGACAAATAATTATGCCAATGGACTCCCAACACAAAAAACCTTGGGACTGAGTGAGCAGCAGTGGTTTCAGCCCTGCCTTTAAGTGGCATTTTTAGCATTTCCTTGCTGCTGCCTATCAATCCAGACCTATCCACGTTGTCAGGGTATCCTTAGCAGCTGATGGAGATGCCTCTTTCCAAAGGCAATTTACATGCACCAAAGTCCTTCCTCCTAATGATTTTCCAGTAGGGACAATTCCCTCTTGTTAGAATGTCCATTGTTTACATTTATCTGATCTTTTCTCACAATTTCCATTGAGCAGCAGTTGCTACAACCACCTGAGCATCAAATGGGCAATTAATTGGAACAGATTTAATAAATGTACTAGAGAAGGGAGCTGTATGTTTATGGACTACAGTCCTTTCATGGTCATGCATAATGGACCAGACACTTTTCCACCCAGCTGCTTATGCTACCACAGTGAACACAAAATTTACATACCTGGAAGAAAACAGCTTCTGAAACATTATTAATGAATGTAGCGAATTTGTCTGTTAGGATAAGCTATGGTATCTCCATGGCTTAACTTTGCACCATCCTATTCTTGGTTAAAAATATCTACAGTGTCTCCCCTTACTGTCTTCTTTCTAAAATATAATTTTATATTTTAATTGAAGTGGCCCTTTTTCAACCAAGAATCAGGGCGTTGTGAAAGAGCAATGTGCATTCCCCCTGTTTGAAAGCACAGGGAATGTTTAAAGTTTTTAGAATACAAAATAACTTTAGAGCGGAAACCTTAGCAACTAAACTATACTAGTAGGAGTGTAATGTTCAAAGAGGGGGACAATGGTCCCAATCCCCTCAGGGTTAGACACACCACATAAGAAATATTTGTATCCAGTACTTGATGCCACATCCTTCAAGGGATAACCATAGGCCCATGAGGCTGGTAGGTGCTCTCAAAGTGAAGGCAAATGGCAATGGCTAACATTCCATGGAGTTCTTGTTAAGTGCCAAGCACTGTCCATTTAATCTTCACAACTACCCCATAAATAAACAATTAGGGGCCGGGCGCAGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGAATCACGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAGATACAAAAAATTAGCTGGGCATAGTGGTGGGTGCCTATAATCCCAGCTACTTGGGAGGCTGGGGCAGGAGAATTGCTTGAACCTGTGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCACCGCACTCCAGACTGGGTGACAGAGCAAGACTCTGTCCCAAAAAAAAAAAAAAAAGAAGAAAAAAAAAGAAACTATTAGGTTGGTGCAAAAGTAATCGCAGTTTTGCCATTGAAATTAATGGCAAAAACCTCAATTACTTTTGCACCAAGTTAATATTATTATTATCCCCATTTTACAAATAAAGAAACTCAGGGTCATGCACATAGTAAGTGAAGGAACTCAGAGTGCCACTCAGTTCTGTCTGATTTCCATGGACCCTCAGTGTAAGCAGTTGGTATATTTTTAATTAATCTTGCTAGAGATAATTGGTAATTATGACACTGAAATCATTGCAACTGTGTTGTGTGTGCATTAGTCTTGTCTCACCAATCAGAATAAACACACTGTGAAGGCAGTGACCACATTAATTACACACGTTTACTTTCCAGGCTAAGCACAGAGCTGGACTTAAGCAGGTCTTTCTTACATCTTTTGCTGAATAAAATAACCCATTTTGAAATGCTTCAAAAACCAATTTACCCATGAGATTATTGAAGGTGTTGGGGGAAAGGACACTCTGGGGATATGAATCGTTAGGGACATTTTAGAGGACACTTTGTTCATAATTATCAAAATGTAAAATGTGTAAACCCCTTGACCCACAGTTATGTGTCTAGGAGTCTACTCAAACTATTCTATAGAAATGCTGATACATATATGCAAAAATAGATAGAACAATGTATAAAGATACATACATATATATGCAAAGGTATATAATATATATACACCTAAATACGTATATAAATATTCATATATTTCTTTTTTGTTACAGTTCTGTTTATTTTAGCAAAATAAGGAAGAAACAACTTAATTGCCCATCAGCAGGGGAATTGTTAAAAAATTAGGCTACAACCACACCTTACAATACAATATAGCCACTAAAATACTGGAGTAGATGTATTAGGTTAACCATATGAAACTGCCAATGTTTTACTGCTATTGACATAAATAACAATTTCATATGCTTCAACGTAATATATGTACAGATGTGAAAAGATTTATAAGAATATTGGTAGTTGAAAAAAGCAAGTTGCAGAACGGTACCTACAGTATGGCATATTTATGTTTAAGACATAAGACAAACCTATAGAGAATAAACAAGAAAGGTACTCACCAAAAAATTAAGATGGTTATTTCTGGGCATGGCAGTTTTCATATTTTACTCTATAAAGTTCTACATCGTTTTACTCCTTCGTGATGAAAATTTTTTATAATTCCTTGGCTGGGCGCTGTGGCTCATGCTTGTAATTCCAGCACTTTGGGGGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCTACATGGTGAAACCGTGTCTCTACTAAAAATACAAAAATTAGCCGGCCTTGGTGGTGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGCAGAATCGCTTGAACCAGGGAGTCAGAGGTTGCAGTGAGCTGAGATTGTGCCACTGCACTCCAGCCTGGTGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAATGATACTTTTTAAAAAAAATTTGTTTAATACAACTGATTCCAAAGTATTTACATATTTTGTAAACATTATTTTTCTGATCTACAAGCTCCAAACTCTCAGGAACTCACCATGTTTCTTCACTGGGCCAGACAAGGAGAGTAATAAAGAATTAACCTTAATTATTCAAAGAAATCCAGATGGTGAGAAAAGAGTAAAAAGCAGAACTTCAACTTGGATTATCTCAAGACGATTGCCTGAAAATTTCCTGCTTATTTTTCCTGTTTAAACCTGGCTTTTCAGATGAATGTGAGGTGATCTGCTTTTCTGTGATTCAGAACTTCATAGAATTTGGCAGGCCAAGAATTACAAAGAAAGGAAGAAAATGAAAGGAGGAAAGTGAGGTAGTGAAAGAAGATGGGCAGAACTTGAGAAAGCTTTATAAAGTAACAGAACACACCCCACACCTTTTGGGAACAAAGGAACAAAGCTGATGGAACACAACAGATGTTCTCCTTCCCAAACCATAAAAGCATAACACTCTACAACTCCTCCTCACTCCAAGGAGTGGCCAATGCTCCTTACTGGAATATCTGTACAACAACGGTTTTTGTTGTTATTATTGTTTCCTTAGAACATGGATAAAAAGGAAAAAACACCATTACCAGAAACTGTCAAGTGTGGTTTAACTGTATTATCATTTTATCTTGATTCTTGTTTCTCCCTAACAAATTTCATTGAGGTATAGTTTACATACAACAACATGCACTCATTTTAATTGTACTCATCCATGAGCTTTGACAAAGCAATACACCTATGTCACCACCACTGTAATCAAGATATAGAACATTTCCAACATCCAAAAAGATTCCTTTGTGTCAACATGCTTTGTTCAGAGTGAAATTGAAAAAAAAAATTAAAATTAAACAAAAATGGCCAGGTATGGTGGCTATGCCTGTAATACCAGCACTTTGGGAGGCCCAGGCAGGCAGATCACTTGAGGCCAGGAGTTCGAGACAGCCTGGCCAACATGGAGAAACCTCATCTCTACTAAAAATACAAAAATTAGCTGGGTATGGTGGTGCACATCTGTAATCCCAGCTACTTGGGAGGCTGAGACACAAGAATCACTTGAACCCAGGAGGCAGAGGTTACAATGAGCCAAGACTGCACCACTGTGCTCCAGCCTGGGTGACAGAGCAAGACACCATCTCAAAACAAAACAAAAACAAAACCATTCCTTTGTGCTGGTCTATCCCCACTCACAACCCTAGCCCCTGGCAACCACTGGTTGGCTTTCTGTCACTCTAGATTAGATTTTTCTTTAGCATTTCATATAAGTAGAATCACATGGTATGAACTCTTCTGTATGTGACTTCTTTCACTCAGCATAATGTCGTCGAGATTCACCCATGTTGCTGTGTGCATTGATAGTTCACTCCTTTTTCTTGCTGAGTAGTATTCCACTGTGCGGCTAGGCCATGAGCACAGTTGATCCATTCGCCTATTGGTAAAACTTTGGTTGCTTCTAATCTTTGACTACTATGAGTAAAGCTGCTATCAGCATTCGTTTGACTCTTACTTTTGAAGTGAAATTCAAACCTAGCCGTTTTGGTGAGGCATGGAGATGAGAGATAAAACTAGCATTTTTAAGGCACCTACTAAGAGCTGGGTGCAGAAGATGAAAGACGAGGAAAGAGGGGAGCATTCTTTCCATCTCTAAAGAAAGCACAATAAGGATTGCCCTGGCCAGGCACGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGACACCGAGGTGGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGATCAATATGGTGAAACTCCGTTTCCACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCGCTCCTGTAATCCCA	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_31:HG3_PB_pbsv_510:HG3_10X_allpass_71:HG2_10X_allpass_47:HG4_PB_assemblyticsfalcon_656:HG3_PB_assemblyticsfalcon_654:HG3_PB_SVrefine2PBcRDovetail_312:HG3_PB_SVrefine2Falcon1Dovetail_329:HG3_Ill_SVrefine2DISCOVARDovetail_349:HG3_Ill_GATKHCSBGrefine_269:HG2_PB_pbsv_511:HG2_PB_assemblyticsfalcon_694:HG2_PB_assemblyticsPBcR_676:HG2_PB_SVrefine2PBcRplusDovetail_342:HG2_PB_SVrefine2Falcon1plusDovetail_352:HG2_Ill_MetaSV_112:HG2_10X_SVrefine210Xhap12_378:HG3_Ill_Krunchall_517:HG2_Ill_Krunchall_498:HG3_PB_HySA_711;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_378:HG2_Ill_MetaSV_112:HG2_PB_SVrefine2Falcon1plusDovetail_352:HG2_PB_SVrefine2PBcRplusDovetail_342:HG2_PB_assemblyticsPBcR_676:HG2_PB_assemblyticsfalcon_694:HG2_PB_pbsv_511:HG3_Ill_GATKHCSBGrefine_269:HG3_Ill_SVrefine2DISCOVARDovetail_349:HG3_PB_SVrefine2Falcon1Dovetail_329:HG3_PB_SVrefine2PBcRDovetail_312:HG3_PB_assemblyticsfalcon_654:HG4_PB_assemblyticsfalcon_656;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00098264;ClusterMaxSizeDiff=0.00098264;ClusterMaxEditDist=0.001638;PBcalls=11;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-6107;DistBack=30548;DistForward=-6106;DistMin=-6106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:62113414-62119521;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=85.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:60:42:./.:23:7:18:11:1|0:0:23:49:0:0/1:42:8:0/1:407:167:6510:.:.
chr1	62390586	HG3_Ill_svaba_542	CAAAAAGACAGACAGGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAGTTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_32:HG2_10X_allpass_48:HG2_PB_SVrefine2PB10Xhap12_440:HG4_PB_assemblyticsfalcon_657:HG2_PB_assemblyticsfalcon_698:HG4_Ill_Krunchall_525:HG3_Ill_Krunchall_521:HG2_Ill_Krunchall_502:HG2_PB_assemblyticsPBcR_680:HG4_PB_pbsv_526:HG2_PB_SVrefine2PBcRplusDovetail_343:HG2_PB_HySA_925:HG4_PB_HySA_703:HG4_Ill_MetaSV_117:HG4_PB_SVrefine2PBcRDovetail_296:HG4_PB_SVrefine2Falcon1Dovetail_341:HG4_Ill_svaba_519:HG4_Ill_SVrefine2DISCOVARDovetail_329:HG4_Ill_GATKHCSBGrefine_302:HG4_10X_allpass_50:HG3_PB_pbsv_512:HG3_PB_assemblyticsfalcon_657:HG3_PB_SVrefine2PBcRDovetail_313:HG3_PB_SVrefine2Falcon1Dovetail_330:HG3_Ill_svaba_542:HG3_Ill_GATKHCSBGrefine_271:HG3_10X_allpass_72:HG2_PB_pbsv_513:HG2_PB_SVrefine2PB10Xhap12_439:HG2_PB_SVrefine2Falcon1plusDovetail_353:HG2_Ill_svaba_520:HG2_Ill_breakscan11_57:HG2_Ill_SVrefine2DISCOVARplusDovetail_373:HG2_Ill_MetaSV_113:HG2_Ill_GATKHCSBGrefine_258:HG2_10X_SVrefine210Xhap12_380;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_380:HG2_Ill_GATKHCSBGrefine_258:HG2_Ill_MetaSV_113:HG2_Ill_SVrefine2DISCOVARplusDovetail_373:HG2_Ill_breakscan11_57:HG2_Ill_svaba_520:HG2_PB_SVrefine2Falcon1plusDovetail_353:HG2_PB_SVrefine2PB10Xhap12_439:HG2_PB_pbsv_513:HG3_10X_allpass_72:HG3_Ill_GATKHCSBGrefine_271:HG3_Ill_svaba_542:HG3_PB_SVrefine2Falcon1Dovetail_330:HG3_PB_SVrefine2PBcRDovetail_313:HG3_PB_assemblyticsfalcon_657:HG3_PB_pbsv_512:HG4_10X_allpass_50:HG4_Ill_GATKHCSBGrefine_302:HG4_Ill_SVrefine2DISCOVARDovetail_329:HG4_Ill_svaba_519:HG4_PB_SVrefine2Falcon1Dovetail_341:HG4_PB_SVrefine2PBcRDovetail_296;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0932945;ClusterMaxSizeDiff=0.0932945;ClusterMaxEditDist=0.0932945;PBcalls=17;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-349;DistBack=38094;DistForward=-30;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:62390587-62390951;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=86.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:20:24:0|1:21:0:0:28:0|1:61:0:0:36:0/1:27:20:./.:32:3:.:.:.
chr1	62589448	HG2_Ill_GATKHC_662	CAAATGTGCTATAAGTTTCTTAACCAGTTTCCTATTATTGAACAATTAGCAT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_682:HG3_PB_HySA_717:HG2_PB_HySA_927:HG3_PB_pbsv_513:HG3_Ill_Krunchall_523:HG3_Ill_GATKHC_703:HG3_Ill_GATKHCSBGrefine_272:HG3_CG_vcfBeta_265:HG3_10X_allpass_73:HG2_PB_pbsv_514:HG2_Ill_manta_103:HG2_Ill_Krunchall_503:HG2_Ill_GATKHC_662:HG2_Ill_GATKHCSBGrefine_259:HG2_Ill_250bpfermikitraw_524:HG2_CG_vcfBeta_278:HG2_10X_allpass_49;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_49:HG2_CG_vcfBeta_278:HG2_Ill_250bpfermikitraw_524:HG2_Ill_GATKHCSBGrefine_259:HG2_Ill_GATKHC_662:HG2_Ill_Krunchall_503:HG2_Ill_manta_103:HG2_PB_pbsv_514:HG3_10X_allpass_73:HG3_CG_vcfBeta_265:HG3_Ill_GATKHCSBGrefine_272:HG3_Ill_GATKHC_703:HG3_Ill_Krunchall_523:HG3_PB_pbsv_513;NumExactMatchSVs=14;ClusterMaxShiftDist=0.175439;ClusterMaxSizeDiff=0.175439;ClusterMaxEditDist=0.175439;PBcalls=5;Illcalls=8;TenXcalls=2;CGcalls=2;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=2;HG2count=10;HG3count=7;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-51;DistBack=17617;DistForward=-44;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:62589447-62589501;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=87.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:0|1:17:1:4:22:1|0:0:6:28:0:0/1:16:10:./.:.:.:.:.:.
chr1	63151819	HG2_PB_SVrefine2PB10Xhap12_444	AAGTAATAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG4_PB_HySA_713:HG2_PB_assemblyticsPBcR_689:HG3_PB_assemblyticsfalcon_661:HG2_PB_assemblyticsfalcon_703:HG3_Ill_Krunchall_531:HG2_Ill_Krunchall_510:HG4_PB_assemblyticsfalcon_661:HG2_PB_pbsv_517:HG4_PB_pbsv_529:HG3_PB_HySA_725:HG3_PB_pbsv_517:HG2_PB_HySA_936:HG4_PB_SVrefine2Falcon1Dovetail_344:HG4_Ill_scalpel_359:HG4_Ill_manta_98:HG4_Ill_SVrefine2DISCOVARDovetail_333:HG4_Ill_GATKHCSBGrefine_304:HG4_10X_allpass_52:HG3_PB_SVrefine2PBcRDovetail_316:HG3_PB_SVrefine2Falcon1Dovetail_332:HG3_Ill_scalpel_436:HG3_Ill_manta_81:HG3_Ill_SVrefine2DISCOVARDovetail_358:HG3_Ill_GATKHCSBGrefine_275:HG3_10X_allpass_75:HG2_PB_SVrefine2PBcRplusDovetail_346:HG2_PB_SVrefine2PB10Xhap12_444:HG2_PB_SVrefine2Falcon1plusDovetail_356:HG2_Ill_scalpel_395:HG2_Ill_manta_104:HG2_Ill_breakscan11_58:HG2_Ill_SVrefine2DISCOVARplusDovetail_380:HG2_Ill_GATKHCSBGrefine_261:HG2_10X_allpass_50:HG2_10X_SVrefine210Xhap12_385:HG4_Ill_MetaSV_119:HG2_Ill_tnscope_33:HG2_Ill_MetaSV_115;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_385:HG2_10X_allpass_50:HG2_Ill_GATKHCSBGrefine_261:HG2_Ill_SVrefine2DISCOVARplusDovetail_380:HG2_Ill_breakscan11_58:HG2_Ill_manta_104:HG2_Ill_scalpel_395:HG2_PB_SVrefine2Falcon1plusDovetail_356:HG2_PB_SVrefine2PB10Xhap12_444:HG2_PB_SVrefine2PBcRplusDovetail_346:HG3_10X_allpass_75:HG3_Ill_GATKHCSBGrefine_275:HG3_Ill_SVrefine2DISCOVARDovetail_358:HG3_Ill_manta_81:HG3_Ill_scalpel_436:HG3_PB_SVrefine2Falcon1Dovetail_332:HG3_PB_SVrefine2PBcRDovetail_316:HG4_10X_allpass_52:HG4_Ill_GATKHCSBGrefine_304:HG4_Ill_SVrefine2DISCOVARDovetail_333:HG4_Ill_manta_98:HG4_Ill_scalpel_359:HG4_PB_SVrefine2Falcon1Dovetail_344;NumExactMatchSVs=23;ClusterMaxShiftDist=0.124444;ClusterMaxSizeDiff=0.124444;ClusterMaxEditDist=0.124444;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=65264;DistForward=2687;DistMin=2687;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:63151820-63152174;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=88.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:1/1:1:33:1:10:1/1:0:36:0:34:1/1:0:39:0/1:2:11:.:.:.
chr1	65909622	HG2_10X_SVrefine210Xhap12_395	AAAGACCTGATACTTTTTTTTTTTTTTTTTTTTTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTT	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_119:HG4_PB_assemblyticsfalcon_682:HG2_PB_assemblyticsPBcR_715:HG3_PB_assemblyticsfalcon_688:HG2_PB_assemblyticsfalcon_729:HG4_Ill_Krunchall_563:HG2_Ill_Krunchall_539:HG3_Ill_Spiral_442:HG2_PB_HySA_967:HG3_PB_pbsv_534:HG2_PB_pbsv_526:HG4_PB_pbsv_539:HG3_PB_HySA_755:HG4_PB_HySA_736:HG4_PB_SVrefine2PBcRDovetail_303:HG4_PB_SVrefine2Falcon1Dovetail_352:HG4_Ill_scalpel_380:HG4_Ill_manta_101:HG4_Ill_SVrefine2DISCOVARDovetail_340:HG4_Ill_GATKHCSBGrefine_313:HG4_10X_allpass_53:HG3_PB_SVrefine2PBcRDovetail_322:HG3_PB_SVrefine2Falcon1Dovetail_338:HG3_Ill_scalpel_456:HG3_Ill_GATKHCSBGrefine_286:HG3_10X_allpass_77:HG2_PB_SVrefine2PBcRplusDovetail_352:HG2_PB_SVrefine2PB10Xhap12_451:HG2_PB_SVrefine2Falcon1plusDovetail_362:HG2_Ill_scalpel_419:HG2_Ill_manta_108:HG2_Ill_SVrefine2DISCOVARplusDovetail_387:HG2_Ill_GATKHCSBGrefine_271:HG2_10X_allpass_51:HG2_10X_SVrefine210Xhap12_395:HG2_Ill_breakscan11_59:HG4_Ill_MetaSV_123:HG2_Ill_tnscope_35;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_395:HG2_10X_allpass_51:HG2_Ill_GATKHCSBGrefine_271:HG2_Ill_SVrefine2DISCOVARplusDovetail_387:HG2_Ill_manta_108:HG2_Ill_scalpel_419:HG2_PB_SVrefine2Falcon1plusDovetail_362:HG2_PB_SVrefine2PB10Xhap12_451:HG2_PB_SVrefine2PBcRplusDovetail_352:HG3_10X_allpass_77:HG3_Ill_GATKHCSBGrefine_286:HG3_Ill_scalpel_456:HG3_PB_SVrefine2Falcon1Dovetail_338:HG3_PB_SVrefine2PBcRDovetail_322:HG4_10X_allpass_53:HG4_Ill_GATKHCSBGrefine_313:HG4_Ill_SVrefine2DISCOVARDovetail_340:HG4_Ill_manta_101:HG4_Ill_scalpel_380:HG4_PB_SVrefine2Falcon1Dovetail_352:HG4_PB_SVrefine2PBcRDovetail_303;NumExactMatchSVs=21;ClusterMaxShiftDist=0.117871;ClusterMaxSizeDiff=0.117871;ClusterMaxEditDist=0.117871;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-270;DistBack=17711;DistForward=94673;DistMin=17711;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:65909623-65909908;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=89.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:44:./.:11:17:2:22:1/1:0:21:0:16:1/1:0:47:./.:.:.:.:.:.
chr1	66078157	HG2_PB_SVrefine2PBcRplusDovetail_354	AGTCATACCTCCTTATGCTTCTCTTGGTTGCAAAAGTTTCTTAGATCTTCTTTGTTTTTATGAACTTGACACAATTGAGAAGTACTGGTCGGGTATTTTGTAGAATCTCCATCAAATGGGTTTTGTCTAATGTTTTCTCATGATTAATTTAGGGTTATGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_396:HG3_PB_pbsv_537:HG2_PB_pbsv_528:HG3_Ill_GATKHCSBGrefine_288:HG3_10X_allpass_79:HG2_Ill_GATKHCSBGrefine_273:HG2_PB_SVrefine2PBcRplusDovetail_354:HG2_PB_SVrefine2PB10Xhap12_452;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_396:HG2_PB_SVrefine2PBcRplusDovetail_354:HG2_PB_SVrefine2PB10Xhap12_452;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0189274;ClusterMaxSizeDiff=0.0189274;ClusterMaxEditDist=0.0253165;PBcalls=4;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-159;DistBack=22216;DistForward=-158;DistMin=-158;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=158;REFWIDENED=1:66078158-66078474;PctSeqSimilarity=0.9944;PctSizeSimilarity=1;PctRecOverlap=0.4437;SizeDiff=0;StartDistance=-89;EndDistance=-89;GTMatch=0;TruScore=81;MatchId=90.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:27:1:2:35:./.:17:1:1:2:0/1:33:13:./.:.:.:.:.:.
chr1	66135707	HG2_PB_SVrefine2PBcRplusDovetail_356	TAAAACATTCACCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCAGAGCTTGCAGTGAGCCAAGATCCCACCACTGCACTGCAGCCTGGGCGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_397:HG3_Ill_Krunchall_561:HG2_Ill_Krunchall_540:HG2_PB_SVrefine2PB10Xhap12_453:HG3_Ill_GATKHCSBGrefine_290:HG2_PB_PB10Xdip_2566:HG4_PB_SVrefine2Falcon1Dovetail_354:HG3_PB_SVrefine2Falcon1Dovetail_340:HG3_Ill_manta_84:HG2_PB_PB10Xdip_2567:HG2_Ill_manta_111:HG3_Ill_Spiral_443:HG2_Ill_Spiral_21:HG2_Ill_MetaSV_121:HG3_PB_pbsv_540:HG3_10X_allpass_80:HG2_PB_pbsv_531:HG2_10X_allpass_52:HG2_Ill_tnscope_36:HG3_PB_SVrefine2PBcRDovetail_325:HG2_PB_SVrefine2PBcRplusDovetail_356:HG2_PB_SVrefine2Falcon1plusDovetail_365:HG2_Ill_SVrefine2DISCOVARplusDovetail_389;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_397:HG3_PB_SVrefine2PBcRDovetail_325:HG2_PB_SVrefine2PBcRplusDovetail_356:HG2_PB_SVrefine2Falcon1plusDovetail_365:HG2_Ill_SVrefine2DISCOVARplusDovetail_389;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0270677;ClusterMaxSizeDiff=0.0270677;ClusterMaxEditDist=0.0270677;PBcalls=10;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-332;DistForward=-320;DistMin=-332;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=1:66135708-66136051;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.997;PctRecOverlap=0.9699;SizeDiff=1;StartDistance=-10;EndDistance=-9;GTMatch=0;TruScore=98;MatchId=91.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:44:0|1:30:0:2:44:0|1:45:0:0:34:0/1:27:30:0/1:25:4:.:.:.
chr1	66263909	HG3_Ill_manta_85	GGCCAGGCTAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGT	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_122:HG3_PB_assemblyticsfalcon_691:HG3_PB_SVrefine2Falcon1Dovetail_341:HG2_10X_allpass_53:HG4_Ill_Krunchall_565:HG3_Ill_Krunchall_564:HG4_PB_assemblyticsfalcon_685:HG4_PB_HySA_738:HG3_PB_pbsv_541:HG4_PB_pbsv_540:HG3_PB_HySA_758:HG4_PB_SVrefine2PBcRDovetail_304:HG4_PB_SVrefine2Falcon1Dovetail_355:HG4_Ill_scalpel_381:HG4_Ill_manta_102:HG4_Ill_GATKHCSBGrefine_314:HG4_10X_allpass_54:HG3_PB_SVrefine2PBcRDovetail_326:HG3_Ill_scalpel_459:HG3_Ill_manta_85:HG3_Ill_GATKHCSBGrefine_291:HG3_10X_allpass_81:HG2_PB_pbsv_532:HG2_PB_SVrefine2Falcon1plusDovetail_366:HG2_Ill_scalpel_422:HG2_Ill_manta_112:HG2_Ill_SVrefine2DISCOVARplusDovetail_391:HG2_Ill_GATKHCSBGrefine_275:HG2_10X_SVrefine210Xhap12_398:HG4_Ill_MetaSV_124:HG2_PB_HySA_972:HG2_Ill_tnscope_37;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_398:HG2_Ill_GATKHCSBGrefine_275:HG2_Ill_SVrefine2DISCOVARplusDovetail_391:HG2_Ill_manta_112:HG2_Ill_scalpel_422:HG2_PB_SVrefine2Falcon1plusDovetail_366:HG2_PB_pbsv_532:HG3_10X_allpass_81:HG3_Ill_GATKHCSBGrefine_291:HG3_Ill_manta_85:HG3_Ill_scalpel_459:HG3_PB_SVrefine2PBcRDovetail_326:HG4_10X_allpass_54:HG4_Ill_GATKHCSBGrefine_314:HG4_Ill_manta_102:HG4_Ill_scalpel_381:HG4_PB_SVrefine2Falcon1Dovetail_355:HG4_PB_SVrefine2PBcRDovetail_304;NumExactMatchSVs=18;ClusterMaxShiftDist=0.112853;ClusterMaxSizeDiff=0.112853;ClusterMaxEditDist=0.224359;PBcalls=13;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=89549;DistForward=-327;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:66263910-66264256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=92.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:25:0|1:30:1:2:26:0|1:34:1:0:18:0/1:21:20:0/1:25:8:.:.:.
chr1	66694579	HG2_Ill_GATKHC_704	AGTCTGTCTTCTATAGTCTGCACTGCCTGAAATTGCTTATTTTTCAGCTATTTTTAACCTAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_542:HG2_PB_HySA_973:HG2_PB_PB10Xdip_2596:HG2_PB_PB10Xdip_2595:HG3_Ill_svaba_580:HG3_Ill_manta_86:HG3_Ill_Krunchall_565:HG3_Ill_GATKHC_749:HG3_Ill_GATKHCSBGrefine_292:HG3_Ill_250bpfermikitraw_557:HG3_Ill_150bpfermikitraw_516:HG3_10X_allpass_82:HG2_PB_pbsv_533:HG2_Ill_svaba_552:HG2_Ill_manta_113:HG2_Ill_SpiralSDKrefine_405:HG2_Ill_Krunchall_543:HG2_Ill_GATKHC_704:HG2_Ill_GATKHCSBGrefine_276:HG2_Ill_250bpfermikitraw_553:HG2_Ill_150bpfermikitraw_491:HG2_Ill_breakscan11_60;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_491:HG2_Ill_250bpfermikitraw_553:HG2_Ill_GATKHCSBGrefine_276:HG2_Ill_GATKHC_704:HG2_Ill_Krunchall_543:HG2_Ill_SpiralSDKrefine_405:HG2_Ill_manta_113:HG2_Ill_svaba_552:HG2_PB_pbsv_533:HG3_10X_allpass_82:HG3_Ill_150bpfermikitraw_516:HG3_Ill_250bpfermikitraw_557:HG3_Ill_GATKHCSBGrefine_292:HG3_Ill_GATKHC_749:HG3_Ill_Krunchall_565:HG3_Ill_manta_86:HG3_Ill_svaba_580;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0162602;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.0487805;PBcalls=5;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-61;DistBack=18300;DistForward=120470;DistMin=18300;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:66694578-66694641;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=93.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:25:1|0:1:25:35:0:0|1:29:0:0:12:0/1:26:32:./.:.:.:.:.:.
chr1	68007959	HG2_Ill_GATKHCSBGrefine_278	TTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCCCCGAGGCTGGAGTACAGTGGCGTGATCTCGGCTCACTGCAACCTCCGACTCCCGAGTTCAAGTGATTCTCACTCCTCAGCCTCCCAAGTAGCTTGGATTACAGGTGTGCACCACCACACCTGCCTAAGTTTTGTATTTTTAGAAGAGACGGGTTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGACCCACCTGTCTCAGCCTCACAAAGTGCTGGGATTACAGGCATGAACCACCATGCCTGGCTCCACTCAATCTGTCTTTCATACCTAGAACAGTGCCTGGTATACTGCAAGAGCTTAATAAATTATTTGCTGCAAATGAAGGACAGTCATCGGGTGAGGTGGGGCTGGGGTGTGTGTGGTGATTCTGATACAACTTGAGTTAATTGCCACTGAACTAAAAAAGTGCTTTAGAGTTTAAAGAGTCTTTTAACATTCACAGCACTATTTTTCACTGCTATTAAATGGTGCAGTTGGTCTCAATAATCCTAAGAACTCTTCTGATAATAAAATGTTCTCAGCCTGTGAGTGGTCCAGTTTTAAGGCCAGCTTCACAGCTGTTGGCATTTTTCACCCAAGCCAGATTTTATGGTTCTTAAGTGGCAGGGTTGACTCTGCTGAGGAACCTCGGAAGGAAGAGACTGTGTCCTTCCTGTCCGGTGGTTGCCTCCTTTGCTTAGGTCATCATGACCTCCAGTCTGGGCTATTAAATGAGGAAAGAGCCACAGTCTAACTTCTATTGTTTAGGAAAACATTTTGACAGACTTTTGGTTGATAGAGGCAGATTCCATCTCTCTCTCTCTCTC	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_127:HG2_PB_pbsv_537:HG4_PB_pbsv_544:HG3_PB_pbsv_546:HG3_Ill_manta_87:HG2_PB_HySA_987:HG2_Ill_manta_114:HG2_Ill_SpiralSDKrefine_413:HG2_Ill_MetaSV_123:HG2_Ill_GATKHCSBGrefine_278:HG3_PB_SVrefine2Falcon1Dovetail_344:HG3_PB_assemblyticsfalcon_699:HG4_Ill_SVrefine2DISCOVARDovetail_346:HG2_PB_SVrefine2PBcRplusDovetail_360:HG2_PB_SVrefine2PB10Xhap12_456:HG2_PB_SVrefine2Falcon1plusDovetail_369:HG2_Ill_SVrefine2DISCOVARplusDovetail_399:HG2_10X_SVrefine210Xhap12_406:HG3_10X_allpass_83;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_278:HG2_Ill_MetaSV_123:HG2_Ill_SpiralSDKrefine_413:HG2_Ill_manta_114:HG2_PB_HySA_987:HG3_Ill_manta_87:HG3_PB_pbsv_546;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0557135;ClusterMaxSizeDiff=0.0557135;ClusterMaxEditDist=0.0557135;PBcalls=9;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-857;DistBack=53598;DistForward=-572;DistMin=-572;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=297;REFWIDENED=1:68007950-68009103;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=94.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:1/1:1:8:1:8:1/1:0:14:0:12:1/1:0:16:1/1:2:35:861:.:.
chr1	69806992	HG4_PB_SVrefine2Falcon1Dovetail_362	TAAAGGGGAGTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_755:HG2_10X_allpass_54:HG3_Ill_Krunchall_593:HG3_PB_assemblyticsfalcon_710:HG2_PB_assemblyticsfalcon_752:HG3_PB_HySA_785:HG2_PB_HySA_995:HG4_PB_assemblyticsfalcon_707:HG2_PB_assemblyticsPBcR_739:HG4_Ill_Krunchall_589:HG3_PB_pbsv_550:HG4_PB_pbsv_549:HG4_Ill_MetaSV_128:HG2_Ill_tnscope_38:HG2_Ill_MetaSV_124:HG4_PB_SVrefine2PBcRDovetail_308:HG4_PB_SVrefine2Falcon1Dovetail_362:HG4_Ill_scalpel_396:HG4_Ill_SVrefine2DISCOVARDovetail_355:HG4_Ill_GATKHCSBGrefine_319:HG4_10X_allpass_56:HG3_PB_SVrefine2PBcRDovetail_331:HG3_PB_SVrefine2Falcon1Dovetail_347:HG3_Ill_scalpel_474:HG3_Ill_SVrefine2DISCOVARDovetail_381:HG3_Ill_GATKHCSBGrefine_296:HG3_10X_allpass_84:HG2_PB_pbsv_543:HG2_PB_SVrefine2PBcRplusDovetail_365:HG2_PB_SVrefine2PB10Xhap12_462:HG2_PB_SVrefine2Falcon1plusDovetail_374:HG2_Ill_scalpel_437:HG2_Ill_manta_115:HG2_Ill_SVrefine2DISCOVARplusDovetail_409:HG2_Ill_GATKHCSBGrefine_281:HG2_10X_SVrefine210Xhap12_413;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_413:HG2_Ill_GATKHCSBGrefine_281:HG2_Ill_SVrefine2DISCOVARplusDovetail_409:HG2_Ill_manta_115:HG2_Ill_scalpel_437:HG2_PB_SVrefine2Falcon1plusDovetail_374:HG2_PB_SVrefine2PB10Xhap12_462:HG2_PB_SVrefine2PBcRplusDovetail_365:HG2_PB_pbsv_543:HG3_10X_allpass_84:HG3_Ill_GATKHCSBGrefine_296:HG3_Ill_SVrefine2DISCOVARDovetail_381:HG3_Ill_scalpel_474:HG3_PB_SVrefine2Falcon1Dovetail_347:HG3_PB_SVrefine2PBcRDovetail_331:HG4_10X_allpass_56:HG4_Ill_GATKHCSBGrefine_319:HG4_Ill_SVrefine2DISCOVARDovetail_355:HG4_Ill_scalpel_396:HG4_PB_SVrefine2Falcon1Dovetail_362:HG4_PB_SVrefine2PBcRDovetail_308;NumExactMatchSVs=21;ClusterMaxShiftDist=0.073132;ClusterMaxSizeDiff=0.073132;ClusterMaxEditDist=0.073132;PBcalls=17;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=103814;DistForward=53994;DistMin=53994;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=1:69806993-69807323;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=95.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:1:23:0:28:1/1:0:24:0:22:1/1:0:46:1/1:1:14:.:.:.
chr1	69943715	HG2_Ill_scalpel_439	GCCCTCTGTCTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTCTTAGCCGGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_414:HG4_Ill_Krunchall_594:HG4_Ill_Krunchall_593:HG2_PB_pbsv_544:HG2_Ill_Krunchall_568:HG4_PB_assemblyticsfalcon_709:HG2_PB_assemblyticsPBcR_742:HG2_PB_assemblyticsfalcon_755:HG2_PB_SVrefine2PB10Xhap12_464:HG2_PB_PB10Xdip_2603:HG4_Ill_MetaSV_129:HG2_Ill_tnscope_39:HG2_Ill_MetaSV_125:HG4_PB_pbsv_550:HG4_PB_SVrefine2PBcRDovetail_309:HG4_PB_SVrefine2Falcon1Dovetail_363:HG4_Ill_scalpel_399:HG4_Ill_manta_104:HG4_Ill_SVrefine2DISCOVARDovetail_356:HG4_Ill_GATKHCSBGrefine_320:HG4_10X_allpass_57:HG2_PB_SVrefine2PBcRplusDovetail_366:HG2_PB_SVrefine2PB10Xhap12_463:HG2_PB_SVrefine2Falcon1plusDovetail_375:HG2_Ill_scalpel_439:HG2_Ill_manta_116:HG2_Ill_breakscan11_61:HG2_Ill_GATKHCSBGrefine_282:HG2_10X_allpass_55;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_414:HG4_PB_pbsv_550:HG4_PB_SVrefine2PBcRDovetail_309:HG4_PB_SVrefine2Falcon1Dovetail_363:HG4_Ill_scalpel_399:HG4_Ill_manta_104:HG4_Ill_SVrefine2DISCOVARDovetail_356:HG4_Ill_GATKHCSBGrefine_320:HG4_10X_allpass_57:HG2_PB_SVrefine2PBcRplusDovetail_366:HG2_PB_SVrefine2PB10Xhap12_463:HG2_PB_SVrefine2Falcon1plusDovetail_375:HG2_Ill_scalpel_439:HG2_Ill_manta_116:HG2_Ill_breakscan11_61:HG2_Ill_GATKHCSBGrefine_282:HG2_10X_allpass_55;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0628099;ClusterMaxSizeDiff=0.0628099;ClusterMaxEditDist=0.0628099;PBcalls=12;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=-190;DistForward=-292;DistMin=-292;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=1:69943716-69944031;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=96.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:53:0|1:33:0:1:50:0|1:34:0:0:28:0/1:33:17:0/1:26:11:.:.:.
chr1	70946189	HG3_10X_allpass_85	TATGGTTATGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_22:HG2_PB_assemblyticsfalcon_760:HG4_PB_assemblyticsfalcon_716:HG3_PB_assemblyticsfalcon_718:HG2_PB_assemblyticsPBcR_748:HG3_Ill_Spiral_471:HG4_Ill_Krunchall_601:HG2_Ill_breakscan11_63:HG2_PB_HySA_1005:HG4_Ill_MetaSV_131:HG2_Ill_tnscope_41:HG2_Ill_MetaSV_128:HG4_PB_pbsv_554:HG4_PB_SVrefine2PBcRDovetail_313:HG4_PB_SVrefine2Falcon1Dovetail_367:HG4_Ill_scalpel_404:HG4_Ill_manta_107:HG4_Ill_SVrefine2DISCOVARDovetail_362:HG4_Ill_GATKHCSBGrefine_324:HG4_10X_allpass_59:HG3_PB_SVrefine2PBcRDovetail_335:HG3_PB_SVrefine2Falcon1Dovetail_351:HG3_Ill_scalpel_479:HG3_Ill_manta_89:HG3_Ill_SVrefine2DISCOVARDovetail_389:HG3_Ill_GATKHCSBGrefine_301:HG3_10X_allpass_85:HG2_PB_pbsv_549:HG2_PB_SVrefine2PBcRplusDovetail_369:HG2_PB_SVrefine2PB10Xhap12_469:HG2_PB_SVrefine2Falcon1plusDovetail_380:HG2_Ill_scalpel_441:HG2_Ill_manta_118:HG2_Ill_SVrefine2DISCOVARplusDovetail_413:HG2_Ill_GATKHCSBGrefine_286:HG2_10X_allpass_57:HG2_10X_SVrefine210Xhap12_421:HG3_PB_pbsv_554:HG4_Ill_Spiral_34;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_421:HG2_10X_allpass_57:HG2_Ill_GATKHCSBGrefine_286:HG2_Ill_SVrefine2DISCOVARplusDovetail_413:HG2_Ill_manta_118:HG2_Ill_scalpel_441:HG2_PB_SVrefine2Falcon1plusDovetail_380:HG2_PB_SVrefine2PB10Xhap12_469:HG2_PB_SVrefine2PBcRplusDovetail_369:HG2_PB_pbsv_549:HG3_10X_allpass_85:HG3_Ill_GATKHCSBGrefine_301:HG3_Ill_SVrefine2DISCOVARDovetail_389:HG3_Ill_manta_89:HG3_Ill_scalpel_479:HG3_PB_SVrefine2Falcon1Dovetail_351:HG3_PB_SVrefine2PBcRDovetail_335:HG4_10X_allpass_59:HG4_Ill_GATKHCSBGrefine_324:HG4_Ill_SVrefine2DISCOVARDovetail_362:HG4_Ill_manta_107:HG4_Ill_scalpel_404:HG4_PB_SVrefine2Falcon1Dovetail_367:HG4_PB_SVrefine2PBcRDovetail_313:HG4_PB_pbsv_554;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0955316;ClusterMaxSizeDiff=0.0955316;ClusterMaxEditDist=0.0955316;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=17953;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:70946190-70946536;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=97.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:61:1/1:0:27:2:17:1/1:0:21:0:22:1/1:0:29:0/1:2:16:.:.:.
chr1	71148798	HG3_10X_allpass_86	CTGAAAAAAATGACATTGGTAATTTCATAGGAATTGTACTGAATCCGTAGATTACTTTGGGCATTATGGTCCTTTTAACAATATTGATTCTTTCAATCCATGAGCATGGAATGTTTTTCCATTTGTTTGTGTCATTTACAATTTCTTTCATCAGTGTTTTGTAGTTCTCCTTGTAAAGATCTTTCTTCTTGGTTAAATATATTTCTAGCTAGTTTATTTTTTGTAGCTATTGTAAATGGGATTGAGTTCT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_556:HG4_Ill_Krunchall_604:HG2_PB_pbsv_551:HG4_Ill_MetaSV_133:HG4_Ill_scalpel_405:HG4_Ill_manta_108:HG4_Ill_GATKHCSBGrefine_325:HG4_10X_allpass_60:HG3_PB_pbsv_556:HG3_PB_SVrefine2PBcRDovetail_337:HG3_Ill_scalpel_480:HG3_Ill_SVrefine2DISCOVARDovetail_391:HG3_Ill_GATKHCSBGrefine_302:HG3_10X_allpass_86:HG2_PB_SVrefine2Falcon1plusDovetail_383:HG2_Ill_scalpel_442:HG2_Ill_manta_119:HG2_Ill_SpiralSDKrefine_427:HG2_Ill_MetaSV_129:HG2_Ill_GATKHCSBGrefine_288:HG2_10X_allpass_58:HG2_10X_SVrefine210Xhap12_422;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_422:HG2_10X_allpass_58:HG2_Ill_GATKHCSBGrefine_288:HG2_Ill_MetaSV_129:HG2_Ill_SpiralSDKrefine_427:HG2_Ill_manta_119:HG2_Ill_scalpel_442:HG2_PB_SVrefine2Falcon1plusDovetail_383:HG3_10X_allpass_86:HG3_Ill_GATKHCSBGrefine_302:HG3_Ill_SVrefine2DISCOVARDovetail_391:HG3_Ill_scalpel_480:HG3_PB_SVrefine2PBcRDovetail_337:HG3_PB_pbsv_556:HG4_10X_allpass_60:HG4_Ill_GATKHCSBGrefine_325:HG4_Ill_manta_108:HG4_Ill_scalpel_405;NumExactMatchSVs=18;ClusterMaxShiftDist=0.012024;ClusterMaxSizeDiff=0.012024;ClusterMaxEditDist=0.0160321;PBcalls=5;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-249;DistBack=5103;DistForward=-246;DistMin=-246;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:71148799-71149050;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=98.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:19:./.:39:2:8:18:0|1:71:0:0:24:0/1:38:22:./.:.:.:.:.:.
chr1	71741319	HG4_PB_SVrefine2PBcRDovetail_315	AGTTCCTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_424:HG4_PB_assemblyticsfalcon_719:HG3_PB_assemblyticsfalcon_722:HG2_PB_assemblyticsPBcR_752:HG4_Ill_Krunchall_606:HG3_Ill_Krunchall_606:HG2_Ill_Krunchall_578:HG2_PB_assemblyticsfalcon_765:HG3_PB_HySA_797:HG2_PB_HySA_1014:HG3_PB_pbsv_557:HG4_Ill_MetaSV_134:HG2_Ill_tnscope_42:HG4_PB_pbsv_557:HG4_PB_SVrefine2PBcRDovetail_315:HG4_PB_SVrefine2Falcon1Dovetail_369:HG4_Ill_svaba_581:HG4_Ill_scalpel_407:HG4_Ill_manta_109:HG4_Ill_SVrefine2DISCOVARDovetail_364:HG4_Ill_GATKHCSBGrefine_326:HG4_10X_allpass_61:HG3_PB_SVrefine2PBcRDovetail_338:HG3_PB_SVrefine2Falcon1Dovetail_354:HG3_Ill_svaba_609:HG3_Ill_scalpel_481:HG3_Ill_manta_90:HG3_Ill_SVrefine2DISCOVARDovetail_393:HG3_Ill_GATKHCSBGrefine_303:HG2_PB_pbsv_552:HG2_PB_SVrefine2PBcRplusDovetail_371:HG2_PB_SVrefine2PB10Xhap12_472:HG2_PB_SVrefine2Falcon1plusDovetail_384:HG2_Ill_svaba_581:HG2_Ill_scalpel_444:HG2_Ill_manta_120:HG2_Ill_breakscan11_64:HG2_Ill_SpiralSDKrefine_430:HG2_Ill_SVrefine2DISCOVARplusDovetail_415:HG2_Ill_GATKHCSBGrefine_289:HG2_10X_allpass_59;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_424:HG4_PB_pbsv_557:HG4_PB_SVrefine2PBcRDovetail_315:HG4_PB_SVrefine2Falcon1Dovetail_369:HG4_Ill_svaba_581:HG4_Ill_scalpel_407:HG4_Ill_manta_109:HG4_Ill_SVrefine2DISCOVARDovetail_364:HG4_Ill_GATKHCSBGrefine_326:HG4_10X_allpass_61:HG3_PB_SVrefine2PBcRDovetail_338:HG3_PB_SVrefine2Falcon1Dovetail_354:HG3_Ill_svaba_609:HG3_Ill_scalpel_481:HG3_Ill_manta_90:HG3_Ill_SVrefine2DISCOVARDovetail_393:HG3_Ill_GATKHCSBGrefine_303:HG2_PB_pbsv_552:HG2_PB_SVrefine2PBcRplusDovetail_371:HG2_PB_SVrefine2PB10Xhap12_472:HG2_PB_SVrefine2Falcon1plusDovetail_384:HG2_Ill_svaba_581:HG2_Ill_scalpel_444:HG2_Ill_manta_120:HG2_Ill_breakscan11_64:HG2_Ill_SpiralSDKrefine_430:HG2_Ill_SVrefine2DISCOVARplusDovetail_415:HG2_Ill_GATKHCSBGrefine_289:HG2_10X_allpass_59;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0819672;ClusterMaxEditDist=0.0819672;PBcalls=16;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-310;DistForward=-298;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=1:71741320-71741642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=99.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:44:1/1:3:15:0:16:1/1:0:15:0:27:1/1:0:48:0/1:3:17:.:.:.
chr1	71828463	HG3_Ill_manta_91	GTGTGTTACCCAAACATGTCATTGAGAAGAAGCAATGCTTTTCTTTTTCAGCTTTATAAGGAAGTGGAATGAACATTTTGGTTAGACAGAAACATGTTGTTTAATTTTGTATTTGGCAGGATAGACTGAATCTCAGTCTGATTATGTGATATAAGCTATTATAATATCCATTAAAAAGTCATTCTGCTAATGGCAACAAATGTGCGAATGCCGCTTCTTTTACAAATGATGAAATACTACTATAATAGTTCTTATTATCTCATTAGGTAGGATACCAAGAAGTTTTTGTTTTATGTATTTTAAGAAATGTGTTGCTAATTTAAGATCACTCTCCCCTGGATGTGAGTAAAAATTCCGAAAAATGAGTACTTTTATTTTCTTTTTGATCACAATTCATCAGTCTATTTAAGGTGT	CA	20	PASS	ClusterIDs=HG2_PB_pbsv_553:HG3_Ill_GATKHCSBGrefine_304:HG2_Ill_GATKHCSBGrefine_290:HG2_Ill_tnscope_43:HG2_Ill_SpiralSDKrefine_431:HG4_PB_SVrefine2Falcon1Dovetail_370:HG4_Ill_Cortex_87:HG3_Ill_manta_91:HG3_Ill_SVrefine2DISCOVARDovetail_394:HG3_Ill_Cortex_97:HG2_PB_SVrefine2PBcRplusDovetail_372:HG2_PB_SVrefine2PB10Xhap12_474:HG2_Ill_manta_121:HG2_Ill_Cortex_172:HG2_10X_SVrefine210Xhap12_425:HG3_Ill_Spiral_478:HG2_Ill_Spiral_23:HG2_PB_assemblyticsPBcR_753:HG2_Ill_MetaSV_131:HG4_PB_assemblyticsfalcon_720:HG3_PB_pbsv_558:HG3_10X_allpass_87:HG2_10X_allpass_60;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_425:HG2_Ill_Cortex_172:HG2_Ill_manta_121:HG2_PB_SVrefine2PB10Xhap12_474:HG2_PB_SVrefine2PBcRplusDovetail_372:HG3_Ill_Cortex_97:HG3_Ill_SVrefine2DISCOVARDovetail_394:HG3_Ill_manta_91:HG4_Ill_Cortex_87:HG4_PB_SVrefine2Falcon1Dovetail_370;NumExactMatchSVs=10;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.031746;PBcalls=7;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-412;DistBack=-266;DistForward=-338;DistMin=-338;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:71828463-71828876;PctSeqSimilarity=0.9818;PctSizeSimilarity=0.9952;PctRecOverlap=0.9904;SizeDiff=-2;StartDistance=4;EndDistance=3;GTMatch=0;TruScore=98;MatchId=100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:35:./.:24:20:14:15:1|0:0:27:51:0:0/1:74:22:0/1:23:6:.:.:.
chr1	73753600	HG4_Ill_svaba_589	ACTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG4_Ill_Spiral_36:HG2_10X_allpass_63:HG3_PB_assemblyticsfalcon_745:HG2_PB_assemblyticsfalcon_781:HG2_PB_assemblyticsPBcR_772:HG4_PB_assemblyticsfalcon_739:HG4_Ill_Krunchall_629:HG3_Ill_Spiral_494:HG2_Ill_Spiral_25:HG3_PB_HySA_814:HG3_PB_pbsv_571:HG4_PB_HySA_781:HG4_Ill_MetaSV_139:HG2_Ill_tnscope_45:HG2_Ill_MetaSV_136:HG4_PB_pbsv_571:HG4_PB_SVrefine2PBcRDovetail_323:HG4_PB_SVrefine2Falcon1Dovetail_377:HG4_Ill_svaba_589:HG4_Ill_scalpel_421:HG4_Ill_SVrefine2DISCOVARDovetail_376:HG4_Ill_GATKHCSBGrefine_339:HG4_10X_allpass_63:HG3_PB_SVrefine2PBcRDovetail_347:HG3_PB_SVrefine2Falcon1Dovetail_364:HG3_Ill_svaba_617:HG3_Ill_scalpel_494:HG3_Ill_manta_95:HG3_Ill_SVrefine2DISCOVARDovetail_403:HG3_Ill_MetaSV_117:HG3_Ill_GATKHCSBGrefine_315:HG3_10X_allpass_90:HG2_PB_pbsv_564:HG2_PB_SVrefine2PBcRplusDovetail_382:HG2_PB_SVrefine2PB10Xhap12_485:HG2_PB_SVrefine2Falcon1plusDovetail_391:HG2_PB_HySA_1029:HG2_Ill_svaba_589:HG2_Ill_manta_125:HG2_Ill_SVrefine2DISCOVARplusDovetail_427:HG2_Ill_GATKHCSBGrefine_300:HG2_10X_SVrefine210Xhap12_432:HG2_Ill_breakscan11_65;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_432:HG2_Ill_GATKHCSBGrefine_300:HG2_Ill_SVrefine2DISCOVARplusDovetail_427:HG2_Ill_manta_125:HG2_Ill_svaba_589:HG2_PB_HySA_1029:HG2_PB_SVrefine2Falcon1plusDovetail_391:HG2_PB_SVrefine2PB10Xhap12_485:HG2_PB_SVrefine2PBcRplusDovetail_382:HG2_PB_pbsv_564:HG3_10X_allpass_90:HG3_Ill_GATKHCSBGrefine_315:HG3_Ill_MetaSV_117:HG3_Ill_SVrefine2DISCOVARDovetail_403:HG3_Ill_manta_95:HG3_Ill_scalpel_494:HG3_Ill_svaba_617:HG3_PB_SVrefine2Falcon1Dovetail_364:HG3_PB_SVrefine2PBcRDovetail_347:HG4_10X_allpass_63:HG4_Ill_GATKHCSBGrefine_339:HG4_Ill_SVrefine2DISCOVARDovetail_376:HG4_Ill_scalpel_421:HG4_Ill_svaba_589:HG4_PB_SVrefine2Falcon1Dovetail_377:HG4_PB_SVrefine2PBcRDovetail_323:HG4_PB_pbsv_571;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0415335;ClusterMaxSizeDiff=0.0415335;ClusterMaxEditDist=0.0415335;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=15270;DistForward=14779;DistMin=14779;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=1:73753601-73753922;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:87:1/1:2:37:0:48:1/1:0:21:0:28:1/1:0:49:./.:2:13:.:.:.
chr1	73768783	HG2_PB_assemblyticsfalcon_782	TGAGACTCTAAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAACACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAAAAAAGAAAAAAGAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_26:HG2_10X_allpass_64:HG3_PB_assemblyticsfalcon_746:HG2_PB_assemblyticsPBcR_773:HG4_10X_allpass_64:HG4_Ill_Krunchall_630:HG3_PB_pbsv_572:HG3_Ill_Krunchall_621:HG2_Ill_Krunchall_598:HG2_PB_pbsv_565:HG3_PB_SVrefine2PBcRDovetail_348:HG4_PB_pbsv_572:HG3_Ill_MetaSV_118:HG2_Ill_tnscope_46:HG2_Ill_MetaSV_137:HG4_PB_SVrefine2PBcRDovetail_324:HG4_Ill_manta_112:HG4_Ill_SVrefine2DISCOVARDovetail_377:HG4_Ill_GATKHCSBGrefine_340:HG3_Ill_SVrefine2DISCOVARDovetail_404:HG3_Ill_GATKHCSBGrefine_316:HG3_10X_allpass_91:HG2_PB_assemblyticsfalcon_782:HG2_PB_SVrefine2PBcRplusDovetail_383:HG2_PB_SVrefine2PB10Xhap12_486:HG2_PB_SVrefine2Falcon1plusDovetail_392:HG2_Ill_manta_126:HG2_Ill_SVrefine2DISCOVARplusDovetail_428:HG2_Ill_GATKHCSBGrefine_301:HG2_10X_SVrefine210Xhap12_433:HG2_Ill_breakscan11_66:HG3_Ill_Spiral_495;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_433:HG2_Ill_GATKHCSBGrefine_301:HG2_Ill_SVrefine2DISCOVARplusDovetail_428:HG2_Ill_manta_126:HG2_PB_SVrefine2Falcon1plusDovetail_392:HG2_PB_SVrefine2PB10Xhap12_486:HG2_PB_SVrefine2PBcRplusDovetail_383:HG2_PB_assemblyticsfalcon_782:HG3_10X_allpass_91:HG3_Ill_GATKHCSBGrefine_316:HG3_Ill_SVrefine2DISCOVARDovetail_404:HG4_Ill_GATKHCSBGrefine_340:HG4_Ill_SVrefine2DISCOVARDovetail_377:HG4_Ill_manta_112:HG4_PB_SVrefine2PBcRDovetail_324:HG4_PB_pbsv_572;NumExactMatchSVs=16;ClusterMaxShiftDist=0.231638;ClusterMaxSizeDiff=0.231638;ClusterMaxEditDist=0.231638;PBcalls=11;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-351;DistBack=-560;DistForward=-344;DistMin=-560;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:73768784-73769148;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=102.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:33:./.:8:20:23:13:1|0:0:24:45:0:0/1:28:18:0/1:34:9:.:.:.
chr1	74312431	HG3_Ill_GATKHCSBGrefine_317	GTGTGAATCATTTTCATAAACTTCTGGTCTGGAAAACAAGAACTCTTTATAGACCTTTGAGTAATATACAACATCATTCTGAATCTCTTTTGTGGAATGTCTACGTCTACAGTTAAGGCATTAAAATAATGTTAGTGAGGGGTTTCTTCTTTTTCCTATATTATTATAACATCTTATTATTCATTAATTTATCAAATCTGTCAAAAACACCTACTGAATCCTAAGCAATCACACTGTGTTCTACTTATGTAT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_567:HG3_PB_pbsv_573:HG3_PB_SVrefine2PBcRDovetail_350:HG3_Ill_manta_96:HG3_Ill_SVrefine2DISCOVARDovetail_409:HG3_Ill_MetaSV_119:HG3_Ill_GATKHCSBGrefine_317:HG3_Ill_Cortex_108:HG3_10X_allpass_92:HG2_PB_assemblyticsfalcon_785:HG2_PB_SVrefine2Falcon1plusDovetail_394:HG2_Ill_manta_127:HG2_Ill_breakscan11_67:HG2_Ill_SpiralSDKrefine_445:HG2_Ill_SVrefine2DISCOVARplusDovetail_431:HG2_Ill_MetaSV_138:HG2_Ill_GATKHCSBGrefine_303:HG2_Ill_Cortex_185:HG2_10X_allpass_65:HG2_10X_SVrefine210Xhap12_437:HG3_Ill_Krunchall_630;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_437:HG2_10X_allpass_65:HG2_Ill_Cortex_185:HG2_Ill_GATKHCSBGrefine_303:HG2_Ill_MetaSV_138:HG2_Ill_SVrefine2DISCOVARplusDovetail_431:HG2_Ill_SpiralSDKrefine_445:HG2_Ill_breakscan11_67:HG2_Ill_manta_127:HG2_PB_SVrefine2Falcon1plusDovetail_394:HG2_PB_assemblyticsfalcon_785:HG3_10X_allpass_92:HG3_Ill_Cortex_108:HG3_Ill_GATKHCSBGrefine_317:HG3_Ill_MetaSV_119:HG3_Ill_SVrefine2DISCOVARDovetail_409:HG3_Ill_manta_96:HG3_PB_SVrefine2PBcRDovetail_350;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00397614;ClusterMaxSizeDiff=0.00397614;ClusterMaxEditDist=0.0238569;PBcalls=5;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-251;DistBack=11764;DistForward=-237;DistMin=-237;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:74312432-74312683;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:26:0|1:35:5:0:19:1|0:0:24:81:0:0/1:42:16:./.:.:.:.:.:.
chr1	74755168	HG2_Ill_250bpfermikitraw_624	GTGTCATTAGTCTTTTAGGTCTGCATGCCTCTCTCTATGACTTTTCCCAATCTTTGTTTTAATCAATAATCTTGTCTCCAGTCTAACATGGGAATTGTGCTCTCTGGCATAAAATGGGCTAC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_578:HG2_PB_pbsv_571:HG2_Ill_breakscan11_68:HG4_Ill_Krunchall_638:HG3_PB_pbsv_576:HG3_Ill_Krunchall_634:HG2_Ill_Krunchall_608:HG4_PB_assemblyticsfalcon_746:HG3_PB_assemblyticsfalcon_755:HG2_PB_assemblyticsPBcR_782:HG4_PB_SVrefine2PBcRDovetail_326:HG4_Ill_svaba_596:HG4_Ill_scalpel_428:HG4_Ill_manta_114:HG4_Ill_SVrefine2DISCOVARDovetail_382:HG4_Ill_MetaSV_142:HG4_Ill_GATKHC_781:HG4_Ill_GATKHCSBGrefine_344:HG4_Ill_Cortex_96:HG4_Ill_250bpfermikitraw_618:HG4_Ill_150bpfermikitraw_593:HG4_CG_vcfBeta_335:HG4_10X_allpass_65:HG3_PB_SVrefine2PBcRDovetail_352:HG3_Ill_svaba_627:HG3_Ill_scalpel_505:HG3_Ill_manta_98:HG3_Ill_SVrefine2DISCOVARDovetail_412:HG3_Ill_MetaSV_120:HG3_Ill_GATKHC_826:HG3_Ill_GATKHCSBGrefine_321:HG3_Ill_Cortex_109:HG3_Ill_250bpfermikitraw_621:HG3_Ill_150bpfermikitraw_588:HG3_CG_vcfBeta_301:HG3_10X_allpass_93:HG2_PB_assemblyticsfalcon_790:HG2_PB_SVrefine2PBcRplusDovetail_387:HG2_PB_SVrefine2PB10Xhap12_489:HG2_PB_SVrefine2Falcon1plusDovetail_396:HG2_Ill_svaba_599:HG2_Ill_scalpel_465:HG2_Ill_manta_129:HG2_Ill_SpiralSDKrefine_447:HG2_Ill_SVrefine2DISCOVARplusDovetail_433:HG2_Ill_MetaSV_139:HG2_Ill_GATKHC_776:HG2_Ill_GATKHCSBGrefine_306:HG2_Ill_Cortex_189:HG2_Ill_250bpfermikitraw_624:HG2_Ill_150bpfermikitraw_559:HG2_CG_vcfBeta_322:HG2_10X_allpass_66:HG2_10X_SVrefine210Xhap12_438:HG2_PB_HySA_1041;NumClusterSVs=55;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_438:HG2_10X_allpass_66:HG2_CG_vcfBeta_322:HG2_Ill_150bpfermikitraw_559:HG2_Ill_250bpfermikitraw_624:HG2_Ill_Cortex_189:HG2_Ill_GATKHCSBGrefine_306:HG2_Ill_GATKHC_776:HG2_Ill_MetaSV_139:HG2_Ill_SVrefine2DISCOVARplusDovetail_433:HG2_Ill_SpiralSDKrefine_447:HG2_Ill_manta_129:HG2_Ill_scalpel_465:HG2_Ill_svaba_599:HG2_PB_SVrefine2Falcon1plusDovetail_396:HG2_PB_SVrefine2PB10Xhap12_489:HG2_PB_SVrefine2PBcRplusDovetail_387:HG2_PB_assemblyticsfalcon_790:HG3_10X_allpass_93:HG3_CG_vcfBeta_301:HG3_Ill_150bpfermikitraw_588:HG3_Ill_250bpfermikitraw_621:HG3_Ill_Cortex_109:HG3_Ill_GATKHCSBGrefine_321:HG3_Ill_GATKHC_826:HG3_Ill_MetaSV_120:HG3_Ill_SVrefine2DISCOVARDovetail_412:HG3_Ill_manta_98:HG3_Ill_scalpel_505:HG3_Ill_svaba_627:HG3_PB_SVrefine2PBcRDovetail_352:HG4_10X_allpass_65:HG4_CG_vcfBeta_335:HG4_Ill_150bpfermikitraw_593:HG4_Ill_250bpfermikitraw_618:HG4_Ill_Cortex_96:HG4_Ill_GATKHCSBGrefine_344:HG4_Ill_GATKHC_781:HG4_Ill_MetaSV_142:HG4_Ill_SVrefine2DISCOVARDovetail_382:HG4_Ill_manta_114:HG4_Ill_scalpel_428:HG4_Ill_svaba_596:HG4_PB_SVrefine2PBcRDovetail_326;NumExactMatchSVs=44;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0408163;PBcalls=13;Illcalls=35;TenXcalls=4;CGcalls=3;PBexactcalls=6;Illexactcalls=31;TenXexactcalls=4;CGexactcalls=3;HG2count=23;HG3count=16;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-121;DistBack=33200;DistForward=24455;DistMin=24455;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:74755169-74755291;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=104.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:44:1/1:1:15:3:10:1/1:0:25:0:19:1/1:0:41:./.:.:.:.:.:.
chr1	75136819	HG3_Ill_150bpfermikitraw_591	CTTATCAGTAGTTCTGCTTTTGCCCTTTGCCTTGTGATCTTTGTTGGACCCTTATCATTAGCTCTGTTTTTGTCCTTTACCTTGTGATCTTTGTTGGACCT	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_610:HG3_PB_HySA_819:HG3_PB_pbsv_577:HG2_PB_pbsv_572:HG3_Ill_MetaSV_121:HG2_PB_HySA_1042:HG3_Ill_svaba_630:HG3_Ill_scalpel_507:HG3_Ill_Krunchall_637:HG3_Ill_GATKHCSBGrefine_322:HG3_Ill_250bpfermikitraw_624:HG3_Ill_150bpfermikitraw_591:HG3_10X_allpass_94:HG2_Ill_svaba_601:HG2_Ill_scalpel_467:HG2_Ill_manta_130:HG2_Ill_GATKHCSBGrefine_307:HG2_Ill_250bpfermikitraw_626:HG2_10X_allpass_67:HG3_PB_SVrefine2PBcRDovetail_353:HG3_Ill_SVrefine2DISCOVARDovetail_413:HG2_PB_SVrefine2PBcRplusDovetail_388:HG2_Ill_SVrefine2DISCOVARplusDovetail_434:HG2_10X_SVrefine210Xhap12_440;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_67:HG2_Ill_250bpfermikitraw_626:HG2_Ill_GATKHCSBGrefine_307:HG2_Ill_manta_130:HG2_Ill_scalpel_467:HG2_Ill_svaba_601:HG3_10X_allpass_94:HG3_Ill_150bpfermikitraw_591:HG3_Ill_250bpfermikitraw_624:HG3_Ill_GATKHCSBGrefine_322:HG3_Ill_Krunchall_637:HG3_Ill_scalpel_507:HG3_Ill_svaba_630;NumExactMatchSVs=13;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.109453;PBcalls=6;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-100;DistBack=170487;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=82;REFWIDENED=1:75136815-75136996;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=105.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:29:./.:17:27:15:7:1|0:0:8:18:0:0/1:24:20:./.:.:.:.:.:.
chr1	75148235	HG2_Ill_svaba_602	ATCATAACATTAAAAAACAAATAAAAAGAAAATAAATTAGAATTTTAAATTATTATAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_573:HG4_PB_HySA_791:HG4_PB_pbsv_579:HG4_PB_assemblyticsfalcon_747:HG4_Ill_svaba_598:HG4_Ill_manta_115:HG4_Ill_Krunchall_640:HG4_Ill_GATKHC_783:HG4_Ill_GATKHCSBGrefine_345:HG4_Ill_Cortex_97:HG4_Ill_250bpfermikitraw_620:HG4_Ill_150bpfermikitraw_595:HG2_Ill_svaba_602:HG2_Ill_scalpel_468:HG2_Ill_manta_131:HG2_Ill_breakscan11_69:HG2_Ill_SpiralSDKrefine_449:HG2_Ill_Krunchall_611:HG2_Ill_GATKHC_778:HG2_Ill_GATKHCSBGrefine_308:HG2_Ill_Cortex_190:HG2_Ill_250bpfermikitraw_627:HG2_10X_allpass_68:HG2_10X_SVrefine210Xhap12_441:HG2_PB_assemblyticsfalcon_791;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_441:HG2_10X_allpass_68:HG2_Ill_250bpfermikitraw_627:HG2_Ill_Cortex_190:HG2_Ill_GATKHCSBGrefine_308:HG2_Ill_GATKHC_778:HG2_Ill_Krunchall_611:HG2_Ill_SpiralSDKrefine_449:HG2_Ill_breakscan11_69:HG2_Ill_manta_131:HG2_Ill_scalpel_468:HG2_Ill_svaba_602:HG4_Ill_150bpfermikitraw_595:HG4_Ill_250bpfermikitraw_620:HG4_Ill_Cortex_97:HG4_Ill_GATKHCSBGrefine_345:HG4_Ill_GATKHC_783:HG4_Ill_Krunchall_640:HG4_Ill_manta_115:HG4_Ill_svaba_598:HG4_PB_assemblyticsfalcon_747:HG4_PB_pbsv_579;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.103448;PBcalls=5;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=11320;DistForward=20332;DistMin=11320;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:75148236-75148294;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=106.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:./.:5:15:20:2:0|1:43:1:0:30:0/1:49:21:./.:.:.:.:.:.
chr1	75842768	HG2_PB_SVrefine2PB10Xhap12_496	GAATGTGGGGAAAAGCAAGAGAGATCAGATTGTTACTGTGTCTGTGTAGAAAGAAGTAGACATAGGAGACTCCATTTTGTTATGTACTAAGAAAAATTCTTCTGCCTTGAGATTCTGTTAATCTATAACCTTACCCCCAACCCCGTGCTCTCTGAAACGTGTGCTGTGTCAACTCAGAGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCCTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAAAACTGCGGAAGGCCGCAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGTCTGAAATATGGCCTCGTGGGAAGGGAAAGACCTGACCATCCCCCAGCCCGACACCCGTAAAGGGTCTGTGCTGAGGAGGATTAGTAAAAGAGGAAGGAATGCCTCTTGCAGTTGAGACAAGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCGGTATAAAACCCGATTGTATGCTCCATCTACTGAGATAGGGAAAAACTGCCTTAGGGCTGGAGGTGGGACCTGCGGGCAGCAATACTGCTTTGTAAAGCATTGAGATGTTTATGTGTATGCATATCTAAAAGCACAGCACTTAATCCTTTACATTGTCTATGATGCAAAGACCTTTGTTCACGTGTTTGTCTGCTGACCCTCTCCCCACAATTGTCTTGTGACCCTGACACATCCCCCTCTTCGAGAAACACCCACAAATGATGAATAAATACTAAGGGAACTCAGAGGCTGGCGGGATCCTCCATATGCTGAACGCTGGTTCCCCGGTTCCCCTTATTTCTTTCTCTATACTTTGTCTCTGTGTCTTTTTCTTTTCCAAATCTCTCGTCCCACCTTACGAGAAACACCCACAGGTGTGTAGGGGCAACCCACCCCTACATCTGGTGCCCAACGTGGAGGCTTTTCTCTAGGGTGAAGGTACGCTCGAGCGTGGTCATTGAGGACAAGTCGACGAGAGATCCCAAGTACGTCTACAGTCAGCCTTACAGTAAGCTTGTGCGCTCGGAAGAAGCTAGGGTGATAATAGGGCAAACTAAAAGTAAAATTAAAAGTAAATATGCCTCTTATCTCAGCTTTATTAAAATTCTTTTAAAAAGAGGGGGAGTTAAAGTATCTACAAAAAATCTAATCAAGCTATTTCAAATAATAGAACAATTTTGCCCATGGTTTCCAGAACAAGGAACTTTAGATCTAAAAGATTGGAAAAGAATTGGTAAGGAACTAAAACAAGCAGGTAGGAAGGGTAATATCATTCCACTTACAGTATGGAATGATTGGGCCATTATTAAAGCAGCTTTAGAACCATTTCAAACAGAAGAAGATAGCATTTCAGTTTCTGATGCCCCTGGAAGCTGTTTAATAGATTGTAATGAAAAGACAAGGAAAAAATCCCAGAAAGAAACGGAAAGTTTACATTGCAAATATGTAGCAGAGCCGGTAATGGCTCAGTCAACGCAAAATGTTGACTATAATCAATTACAGGAGGTGATATATCCTGAAACGTTAAAATTAGAAGGAAAAGGTCCAGAATTAATGGGGCCATCAGAGTCTAAACCACGAGGCACAAGTCCTCTTCCAGCAGGTCAGGTGCCCGTAAGATTACAACCTCAAACGCAGGTTAAAGAAAATAAGACCCAACCGCCAGTAGCTTATCAATACTGGCCGCCGGCTGAACTTCAGTATCGGCCACCCCCAGAAAGTCAGTATGGATATCCAGGAATGCCCCCAGCACCACAGGGCAGGGCGCCATACCCTCAGCTGCCCACTAGGAGACTTAATCCTATGGCACCACCTAGTAGACAGGGTAGTGAATTACATGAAATTATTGATAAATCAAGAAAGGAAGGAGATACTGAGGCATGGCAATTCCCAGTAACGTTAGAACCAATGCCACCTGGAGAAGGAGCCCAAGAGGGAGAGCCTCCCACAGTTGAGGCCAGATACAAGTCTTTTTCGATAAAAATGCTAAAAGATATGAAAGAGGGAGTAAAACAGTATGGACCCAACTCTCCTTATATGAGGACATTATTAGATTCCATTGCTCATGGACATAGACTCATTCCTTATGATTGGGAGATTCTGGCAAAATCGTCTCTCTCACCCTCTCAATTTTTACAATTTAAGACTTGGTGGATTGATGGGGTACAAGAACAGGTCCGAAGAAATAGGGCTGCCAATCCTCCAGTTAACATAGATGCAGATCAACTATTAGGAATAGGTCAAAATTGGAGTACTATTAGTCAACAAGCATTAATGCAAAATGAGGCCATTGAACAAGTTAGAGCTATCTGCCTTAGAGCCTGGGAAAAAATCCAAGACCCAGGAAGTACCTGCCCCTCATTTAATACAGTAAGACAAGGTTCAAAAGAGCCCTATCCTGATTTTGTGGCAAGGCTCCAAGATGTTGCTCAAAAGTCAATTGCCGATGAAAAAGCCCGTAAGGTCATAGTGGAGTTGATGGCATATGAAAACGCCAATCCTGAGTGTCAATCAGCCATTAAGCCATTAAAAGGAAAGGTTCCTGCAGGATCAGATGTAATCTCAGAATATGTAAAAGCCTGTGATGGAATCGGAGGAGCTATGCATAAAGCTATGCTTATGGCTCAAGCAATAACAGGAGTTGTTTTAGGAGGGCAAGTTAGAACATTTGGAAGAAAATGTTATAATTGTGGTCAAATTGGTCACTTAAAAAAGAATTGCCCAGTCTTAAATAAACAGAATATAACTATTCAACCAACTACAACAGGTAGAGAGCCACCTGACTTATGTCCAAGATGTAAAAAAGGAAAACATTGGGCTAGTCAATGTCGTTCTAAATTTGATAAAAATGGGCAACCATTGTCGGGAAATGAGCAAAGGGGCCAGCCTCAGGCCCCACAACAAACTGGGGCATTCCCAATTCAGCCATTTGTTCCTCAGGGTTTTCAGGGACAACAACCCCCACTGTCCCAAGTGTTTCAGGGAATAAGCCAGTTACCACAATACAACAATTGTCCCCCGCCACAAGCGGCAGTGCAGCAGTAGATTTATGTACTATACAAGCAGTCTCTCTGCTTCCAGGGGAGCCCCCACAAAAAATCCCCACAGGGGTATATGGCCCCCTGCCTGAGGGGACTGTAGGACTAATCTTGGGAAGATCAAGTCTAAATCTAAAAGGAGTTCAAATTCATACTAGTGTGGTTGATTCAGACTATAAAGGTGAAATTCAATTGGTTATTAGCTCTTCAATTCCTTGGAGTGCCAGTCCAGGAGACAGGATTGCTCAATTATTACTCCTGCCATATATTAAGGATGGAAATAGTGAAATAAAAAGAATAGGAGGGCTTGTAAGCACTGATCCAACAGGAAAGGCTGCATATTGGGCAAGTCAGGTCTCAGAGAACAGACCTGTGTGTAAGGCCATTATTCAAGGAAAACTAATTTGGTGGAAAGATAATAAAAATAAGACATGGGAAATAGGTAAGGTGATAACGTGGGGGAGAGGTTTTGCTTGTGTTTCACCAGGAGAAAATCAGCTTCCTGTTTGGATACCCACTAGACATTTGAAGTTCTACAATGAACCCATCGGAGATGCAAAGAAAAGGGCCTCCACGGAGATGGTAACACCAGTCACATGGATGGATAATCCTATAGAAGTATATGTTAATGATAGTGAATGGGTACCTGGCCCCACAGATGATCGCTGCCCTGCCAAACCTGAGGAAGAAGGGATGATGATAAATATTTCCATTGGGTATCGTTATCCTCCTATTTGCCTAGGGAGAGCACCAGGATGTTTAATGGCTGCAGTCCAAAATTGGTTGGTGGAAGTACCTACTGTCAGTCCCATCAGTAGATTCACTTATCACATGGTAAGCGGGATGTCACTCAGGCCACGGGTAAATTATTTACAAGACTTTCCTTATCAAAGATCATTAAAATTTAGACCTAAAGGGAAACCTTGCCCCAAGGAAATTCCCAAAGAATCAAAAAATACAGAAGTTTTAGTTTGGGAAGAATGTGTGGCCAATAGTGCGGTGATATTACAAAACAATGAATTCGGAACTATTATAGATTGGGCACCTCGAGGTCAATTCTACCACAATTGCTCAGGACAAACTCAGTCGTGTCCAAGTGCACAAGTGAGTCCAGCTGTTGATAGCGACTTAACAGAAAGTTTAGACAAACATAAGCATAAAAAATTGCAGTCTTTCTACCCTTGGGAATGGGGAGAAAAAGGAATCTCTACCCCAAGACCAAAAATAGTAAGTCCTGTTTCTGGTCCTGAACATCCAGAATTATGGAGGCTTACTGTGGCCTCACACCACATTAGAATTTGGTCTGGAAATCAAACTTTAGAAACAAGAGATCGTAAGCCATTTTATACTGTCGACCTAAATTCCAGTCTAACAGTTCCTTTACAAAGTTGCGTAAAGCCCCCTTATATGCTAGTTGTAGGAAATATAGTTATTAAACCAGACTCCCAGACTATAACCTGTGAAAATTGTAGATTGCTTACTTGCATTGATTCAACTTTTAATTGGCAACACCGTATTCTGCTGGTGAGAGCAAGAGAGGGCGTGTGGATCCCTGTGTCCATGGACCGACCGTGGGAGGCCTCACCATCCGTCCATATTTTGACTGAAGTATTAAAAGGTGTTTTAAATAGATCCAAAAGATTCATTTTTACTTTAATTGCAGTGATTATGGGATTAATTGCAGTCACAGCTACGGCTGCTGTAGCAGGAGTTGCATTGCATTCTTCTGTTCAGTCAGTAAACTTTGTTAATGATTGGCAAAATAATTCTACAAGATTGTGGAATTCACAATCTAGTATTGATCAAAAATTGGCAAATCAAATTAATGATCTTAGACAAACTGTCATTTGGATGGGAGACAGACTCATGAGCTTAGAACATCGTTTCCAGTTACAATGTGACTGGAATACGTCAGATTTTTGTATTACACCCCAAATTTATAATGAGTCTGAGCATCACTGGGACATGGTTAGACGCCATCTACAGGGAAGAGAAGATAATCTCACTTTAGACATTTCCAAATTAAAAGAACAAATTTTCGAAGCATCAAAAGCCCATTTAAATTTGGTGCCAGGAACTGAGGCAATTGCAGGAGTTGCTGATGGCCTCGCAAATCTTAACCCTGTCACTTGGGTTAAGACCATTGGAAGTACTACAATTATAAATCTCATATTAATCCTTGTGTGCCTGTTTTGTCTGTTGTTAGTCTGCAGGTGTACCCAACAGCTCCGAAGAGACAGCGACCATCGAGAACGGGCCATGATGACGATGGCGGTTTTGTCGAAAAGAAAAGGGGGA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_496:HG3_Ill_MetaSV_122:HG4_Ill_MetaSV_145:HG2_Ill_MetaSV_141:HG3_PB_pbsv_583:HG2_PB_SVrefine2PBcRplusDovetail_394;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_496:HG3_PB_pbsv_583:HG2_PB_SVrefine2PBcRplusDovetail_394;NumExactMatchSVs=3;ClusterMaxShiftDist=0.152742;ClusterMaxSizeDiff=0.152742;ClusterMaxEditDist=0.152742;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-5405;DistBack=46931;DistForward=-4889;DistMin=-4889;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=970;REFWIDENED=1:75842769-75849143;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9996;PctRecOverlap=0.842;SizeDiff=2;StartDistance=-854;EndDistance=-852;GTMatch=0;TruScore=94;MatchId=107.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:13:0|1:21:1:0:9:./.:9:0:0:0:0/0:42:0:0/1:342:168:5459:.:.
chr1	76011865	HG2_PB_SVrefine2PB10Xhap12_497	TCAAATTCAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTAGTAGAGACGGGGTTTCACCCTGTTAGCCAGGATGGTCTCGATCTCCCGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_70:HG3_PB_assemblyticsfalcon_765:HG2_PB_assemblyticsfalcon_799:HG4_PB_assemblyticsfalcon_758:HG2_PB_assemblyticsPBcR_791:HG4_Ill_Krunchall_648:HG3_Ill_Krunchall_643:HG2_Ill_Krunchall_619:HG2_PB_HySA_1058:HG4_PB_pbsv_586:HG3_PB_pbsv_585:HG2_PB_HySA_1057:HG3_PB_HySA_827:HG3_Ill_MetaSV_123:HG2_Ill_tnscope_47:HG4_PB_SVrefine2PBcRDovetail_331:HG4_Ill_svaba_606:HG4_Ill_scalpel_434:HG4_Ill_manta_116:HG4_Ill_SVrefine2DISCOVARDovetail_386:HG4_Ill_MetaSV_146:HG4_Ill_GATKHCSBGrefine_350:HG4_10X_allpass_66:HG3_PB_SVrefine2PBcRDovetail_358:HG3_PB_SVrefine2Falcon1Dovetail_366:HG3_Ill_svaba_638:HG3_Ill_scalpel_511:HG3_Ill_manta_99:HG3_Ill_SVrefine2DISCOVARDovetail_416:HG3_Ill_GATKHCSBGrefine_326:HG3_10X_allpass_95:HG2_PB_pbsv_580:HG2_PB_SVrefine2PBcRplusDovetail_395:HG2_PB_SVrefine2PB10Xhap12_497:HG2_PB_SVrefine2Falcon1plusDovetail_402:HG2_Ill_svaba_611:HG2_Ill_scalpel_473:HG2_Ill_manta_132:HG2_Ill_SpiralSDKrefine_457:HG2_Ill_SVrefine2DISCOVARplusDovetail_438:HG2_Ill_MetaSV_142:HG2_Ill_GATKHCSBGrefine_313:HG2_10X_allpass_69:HG2_10X_SVrefine210Xhap12_447;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_447:HG2_10X_allpass_69:HG2_Ill_GATKHCSBGrefine_313:HG2_Ill_MetaSV_142:HG2_Ill_SVrefine2DISCOVARplusDovetail_438:HG2_Ill_SpiralSDKrefine_457:HG2_Ill_manta_132:HG2_Ill_scalpel_473:HG2_Ill_svaba_611:HG2_PB_SVrefine2Falcon1plusDovetail_402:HG2_PB_SVrefine2PB10Xhap12_497:HG2_PB_SVrefine2PBcRplusDovetail_395:HG2_PB_pbsv_580:HG3_10X_allpass_95:HG3_Ill_GATKHCSBGrefine_326:HG3_Ill_SVrefine2DISCOVARDovetail_416:HG3_Ill_manta_99:HG3_Ill_scalpel_511:HG3_Ill_svaba_638:HG3_PB_SVrefine2Falcon1Dovetail_366:HG3_PB_SVrefine2PBcRDovetail_358:HG4_10X_allpass_66:HG4_Ill_GATKHCSBGrefine_350:HG4_Ill_MetaSV_146:HG4_Ill_SVrefine2DISCOVARDovetail_386:HG4_Ill_manta_116:HG4_Ill_scalpel_434:HG4_Ill_svaba_606:HG4_PB_SVrefine2PBcRDovetail_331;NumExactMatchSVs=29;ClusterMaxShiftDist=0.102167;ClusterMaxSizeDiff=0.102167;ClusterMaxEditDist=0.102167;PBcalls=16;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=18;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=2604;DistForward=26616;DistMin=2604;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:76011866-76012211;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:77:1/1:0:35:0:43:1/1:0:26:0:20:1/1:0:43:./.:1:16:.:.:.
chr1	76743234	HG2_Ill_150bpfermikitraw_581	TATATATATATATATATATACACACACACATATGTTTATGTGTATATATATATATATATATATACAC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_590:HG4_Ill_svaba_617:HG4_Ill_svaba_616:HG3_PB_HySA_839:HG4_Ill_scalpel_442:HG4_Ill_Krunchall_658:HG4_Ill_GATKHC_799:HG4_Ill_GATKHCSBGrefine_357:HG4_Ill_250bpfermikitraw_635:HG4_Ill_150bpfermikitraw_610:HG3_Ill_svaba_649:HG3_Ill_scalpel_518:HG3_Ill_Krunchall_654:HG3_Ill_GATKHC_845:HG3_Ill_GATKHCSBGrefine_333:HG3_Ill_250bpfermikitraw_642:HG3_Ill_150bpfermikitraw_606:HG2_Ill_svaba_621:HG2_Ill_scalpel_480:HG2_Ill_manta_134:HG2_Ill_SpiralSDKrefine_462:HG2_Ill_Krunchall_629:HG2_Ill_GATKHC_798:HG2_Ill_GATKHCSBGrefine_318:HG2_Ill_250bpfermikitraw_648:HG2_Ill_150bpfermikitraw_581:HG3_PB_assemblyticsfalcon_772:HG2_PB_assemblyticsPBcR_798:HG2_PB_HySA_1074:HG4_PB_assemblyticsfalcon_765:HG2_PB_assemblyticsfalcon_806:HG3_Ill_svaba_648:HG3_Ill_scalpel_517:HG3_Ill_Krunchall_653:HG3_Ill_GATKHC_844:HG3_Ill_GATKHCSBGrefine_332:HG3_Ill_250bpfermikitraw_641:HG3_Ill_150bpfermikitraw_605:HG2_PB_pbsv_585:HG4_PB_pbsv_591:HG4_PB_HySA_813:HG4_Ill_svaba_615:HG4_Ill_scalpel_441:HG4_Ill_Krunchall_657:HG4_Ill_GATKHC_798:HG4_Ill_GATKHCSBGrefine_356:HG4_Ill_250bpfermikitraw_634:HG4_Ill_150bpfermikitraw_609:HG4_Ill_SVrefine2DISCOVARDovetail_391;NumClusterSVs=49;ExactMatchIDs=HG2_Ill_150bpfermikitraw_581:HG2_Ill_250bpfermikitraw_648:HG2_Ill_GATKHCSBGrefine_318:HG2_Ill_GATKHC_798:HG2_Ill_Krunchall_629:HG2_Ill_SpiralSDKrefine_462:HG2_Ill_manta_134:HG2_Ill_scalpel_480:HG2_Ill_svaba_621:HG3_Ill_150bpfermikitraw_606:HG3_Ill_250bpfermikitraw_642:HG3_Ill_GATKHCSBGrefine_333:HG3_Ill_GATKHC_845:HG3_Ill_Krunchall_654:HG3_Ill_scalpel_518:HG3_Ill_svaba_649:HG4_Ill_150bpfermikitraw_610:HG4_Ill_250bpfermikitraw_635:HG4_Ill_GATKHCSBGrefine_357:HG4_Ill_GATKHC_799:HG4_Ill_Krunchall_658:HG4_Ill_scalpel_442:HG4_Ill_svaba_616;NumExactMatchSVs=23;ClusterMaxShiftDist=0.333333;ClusterMaxSizeDiff=0.333333;ClusterMaxEditDist=0.333333;PBcalls=10;Illcalls=39;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=17;HG4count=19;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=93697;DistForward=586;DistMin=586;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:76743233-76743302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:59:1/1:0:22:1:14:1/1:0:36:0:39:1/1:0:46:./.:.:.:.:.:.
chr1	77100366	HG3_Ill_scalpel_519	TGGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG	T	20	PASS	ClusterIDs=HG3_PB_pbsv_592:HG2_PB_assemblyticsfalcon_809:HG2_PB_SVrefine2Falcon1plusDovetail_407:HG4_PB_assemblyticsfalcon_768:HG3_PB_assemblyticsfalcon_774:HG2_PB_assemblyticsPBcR_800:HG4_Ill_Krunchall_661:HG3_Ill_Krunchall_655:HG2_Ill_Krunchall_631:HG2_PB_HySA_1077:HG4_PB_SVrefine2Falcon1Dovetail_381:HG2_Ill_tnscope_48:HG4_PB_pbsv_593:HG4_Ill_scalpel_444:HG4_Ill_MetaSV_149:HG4_Ill_GATKHCSBGrefine_358:HG4_10X_allpass_67:HG3_PB_SVrefine2PBcRDovetail_364:HG3_PB_SVrefine2Falcon1Dovetail_371:HG3_Ill_scalpel_519:HG3_Ill_manta_103:HG3_Ill_SVrefine2DISCOVARDovetail_424:HG3_Ill_MetaSV_126:HG3_Ill_GATKHCSBGrefine_334:HG3_10X_allpass_97:HG2_PB_pbsv_587:HG2_PB_SVrefine2PBcRplusDovetail_400:HG2_PB_SVrefine2PB10Xhap12_503:HG2_Ill_scalpel_482:HG2_Ill_manta_135:HG2_Ill_SpiralSDKrefine_463:HG2_Ill_MetaSV_145:HG2_Ill_GATKHCSBGrefine_319:HG2_10X_allpass_70:HG2_10X_SVrefine210Xhap12_453;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_453:HG2_10X_allpass_70:HG2_Ill_GATKHCSBGrefine_319:HG2_Ill_MetaSV_145:HG2_Ill_SpiralSDKrefine_463:HG2_Ill_manta_135:HG2_Ill_scalpel_482:HG2_PB_SVrefine2PB10Xhap12_503:HG2_PB_SVrefine2PBcRplusDovetail_400:HG2_PB_pbsv_587:HG3_10X_allpass_97:HG3_Ill_GATKHCSBGrefine_334:HG3_Ill_MetaSV_126:HG3_Ill_SVrefine2DISCOVARDovetail_424:HG3_Ill_manta_103:HG3_Ill_scalpel_519:HG3_PB_SVrefine2Falcon1Dovetail_371:HG3_PB_SVrefine2PBcRDovetail_364:HG4_10X_allpass_67:HG4_Ill_GATKHCSBGrefine_358:HG4_Ill_MetaSV_149:HG4_Ill_scalpel_444:HG4_PB_pbsv_593;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0607143;ClusterMaxSizeDiff=0.0607143;ClusterMaxEditDist=0.117647;PBcalls=14;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-283;DistBack=28819;DistForward=11490;DistMin=11490;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=1:77100367-77100658;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=110.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:36:0|1:26:1:0:39:1|0:0:21:34:0:0/1:18:23:./.:.:.:.:.:.
chr1	77112140	HG3_Ill_GATKHCSBGrefine_335	AGAAAACATATGTGAATTCTATATACTCAGTAAAAAGGAGATAGAATACTGATGACTTCACTTTCCATCTTGATCTACCTAGAAGACGTAAAAAAACCTTCTCAATAAGACAGTTAAATCTGG	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_810:HG4_PB_pbsv_594:HG4_Ill_Krunchall_662:HG3_Ill_Krunchall_656:HG4_PB_assemblyticsfalcon_769:HG3_PB_assemblyticsfalcon_775:HG2_PB_assemblyticsPBcR_801:HG2_PB_pbsv_588:HG4_Ill_GATKHC_802:HG4_Ill_GATKHCSBGrefine_359:HG2_Ill_GATKHC_800:HG2_Ill_GATKHCSBGrefine_320:HG2_Ill_SpiralSDKrefine_464:HG2_PB_SVrefine2PBcRplusDovetail_401:HG2_PB_SVrefine2Falcon1plusDovetail_408:HG2_Ill_SVrefine2DISCOVARplusDovetail_446:HG2_10X_SVrefine210Xhap12_454:HG4_Ill_Spiral_37:HG2_Ill_Spiral_27:HG3_PB_pbsv_593:HG2_PB_HySA_1078:HG4_PB_SVrefine2Falcon1Dovetail_382:HG3_PB_SVrefine2PBcRDovetail_365:HG3_PB_SVrefine2Falcon1Dovetail_372:HG3_Ill_GATKHCSBGrefine_335:HG3_10X_allpass_98;NumClusterSVs=26;ExactMatchIDs=HG2_PB_assemblyticsfalcon_810:HG4_PB_SVrefine2Falcon1Dovetail_382:HG3_PB_SVrefine2PBcRDovetail_365:HG3_PB_SVrefine2Falcon1Dovetail_372:HG3_Ill_GATKHCSBGrefine_335:HG3_10X_allpass_98;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.0759494;PBcalls=13;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-122;DistBack=11490;DistForward=5069;DistMin=5069;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=123;REFWIDENED=1:77112091-77112335;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:37:0|1:31:0:1:39:1|0:0:8:38:1:0/1:33:15:./.:.:.:.:.:.
chr1	78527299	HG4_Ill_scalpel_452	TTCAGCCTCCTGAGTAGCTGGGACTACAGGCGTGAGCCACCAAGCCCAGCTAATTTATAATGAAGTGTTCTTTACACTAATTTTAAACAGGCCCCAGTTTCAAGTGATTTTCCTGCC	T	20	PASS	ClusterIDs=HG2_PB_HySA_1105:HG2_Ill_Krunchall_643:HG4_PB_pbsv_602:HG4_Ill_svaba_632:HG4_Ill_scalpel_452:HG4_Ill_manta_122:HG4_Ill_SVrefine2DISCOVARDovetail_399:HG4_Ill_MetaSV_151:HG4_Ill_GATKHC_823:HG4_Ill_GATKHCSBGrefine_370:HG2_PB_pbsv_599:HG2_Ill_svaba_633:HG2_Ill_scalpel_492:HG2_Ill_breakscan11_71:HG2_Ill_SVrefine2DISCOVARplusDovetail_454:HG2_Ill_MetaSV_148:HG2_Ill_GATKHC_821:HG2_Ill_GATKHCSBGrefine_332:HG2_10X_SVrefine210Xhap12_458:HG4_PB_HySA_831;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_458:HG2_Ill_GATKHCSBGrefine_332:HG2_Ill_GATKHC_821:HG2_Ill_MetaSV_148:HG2_Ill_SVrefine2DISCOVARplusDovetail_454:HG2_Ill_breakscan11_71:HG2_Ill_scalpel_492:HG2_Ill_svaba_633:HG2_PB_pbsv_599:HG4_Ill_GATKHCSBGrefine_370:HG4_Ill_GATKHC_823:HG4_Ill_MetaSV_151:HG4_Ill_SVrefine2DISCOVARDovetail_399:HG4_Ill_manta_122:HG4_Ill_scalpel_452:HG4_Ill_svaba_632;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0619469;ClusterMaxSizeDiff=0.061674;ClusterMaxEditDist=0.0973451;PBcalls=4;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-116;DistBack=29082;DistForward=46092;DistMin=29082;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=193;REFWIDENED=1:78517468-78527589;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:18:0|1:39:2:0:12:1|0:0:18:45:0:0/1:35:30:./.:.:.:.:.:.
chr1	79401508	HG4_10X_allpass_69	TAAGAATATGGATATTCTGGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_72:HG2_PB_HySA_1112:HG4_PB_HySA_835:HG2_PB_assemblyticsfalcon_835:HG3_PB_assemblyticsfalcon_790:HG2_PB_assemblyticsPBcR_818:HG3_Ill_Krunchall_681:HG2_Ill_Krunchall_654:HG4_PB_assemblyticsfalcon_787:HG2_PB_pbsv_602:HG3_PB_pbsv_607:HG4_Ill_MetaSV_153:HG3_Ill_MetaSV_130:HG2_Ill_tnscope_49:HG4_PB_pbsv_605:HG4_PB_SVrefine2PBcRDovetail_342:HG4_Ill_svaba_635:HG4_Ill_scalpel_455:HG4_Ill_manta_123:HG4_Ill_SVrefine2DISCOVARDovetail_405:HG4_Ill_GATKHCSBGrefine_372:HG4_10X_allpass_69:HG3_PB_SVrefine2Falcon1Dovetail_379:HG3_Ill_svaba_669:HG3_Ill_scalpel_537:HG3_Ill_manta_106:HG3_Ill_SVrefine2DISCOVARDovetail_433:HG3_Ill_GATKHCSBGrefine_347:HG3_10X_allpass_99:HG2_PB_SVrefine2PBcRplusDovetail_405:HG2_PB_SVrefine2PB10Xhap12_510:HG2_PB_SVrefine2Falcon1plusDovetail_415:HG2_Ill_svaba_639:HG2_Ill_scalpel_498:HG2_Ill_manta_136:HG2_Ill_SVrefine2DISCOVARplusDovetail_459:HG2_Ill_MetaSV_149:HG2_Ill_GATKHCSBGrefine_334:HG2_10X_allpass_71:HG2_10X_SVrefine210Xhap12_462;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_462:HG2_10X_allpass_71:HG2_Ill_GATKHCSBGrefine_334:HG2_Ill_MetaSV_149:HG2_Ill_SVrefine2DISCOVARplusDovetail_459:HG2_Ill_manta_136:HG2_Ill_scalpel_498:HG2_Ill_svaba_639:HG2_PB_SVrefine2Falcon1plusDovetail_415:HG2_PB_SVrefine2PB10Xhap12_510:HG2_PB_SVrefine2PBcRplusDovetail_405:HG3_10X_allpass_99:HG3_Ill_GATKHCSBGrefine_347:HG3_Ill_SVrefine2DISCOVARDovetail_433:HG3_Ill_manta_106:HG3_Ill_scalpel_537:HG3_Ill_svaba_669:HG3_PB_SVrefine2Falcon1Dovetail_379:HG4_10X_allpass_69:HG4_Ill_GATKHCSBGrefine_372:HG4_Ill_SVrefine2DISCOVARDovetail_405:HG4_Ill_manta_123:HG4_Ill_scalpel_455:HG4_Ill_svaba_635:HG4_PB_SVrefine2PBcRDovetail_342:HG4_PB_pbsv_605;NumExactMatchSVs=26;ClusterMaxShiftDist=0.111288;ClusterMaxSizeDiff=0.111288;ClusterMaxEditDist=0.111288;PBcalls=14;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=31868;DistForward=25386;DistMin=25386;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:79401509-79401848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:1/1:2:44:0:23:1/1:0:16:0:33:1/1:0:46:./.:2:10:.:.:.
chr1	80221780	HG2_PB_SVrefine2Falcon1plusDovetail_419	CTTTCTGTTTGCTCTTCGATCATCTCTAATTAGACTTTTATCTATGCAACGGCAAATGAAAATGCTTTTGTAAACTTCTCCAGTGATCATGTGTTTAAATATTCAATTGGCAATTCTCAGTTATTTGTTTTAATCTATCAGCAGTATTTGACACAAGAAATTACTCCCTCCTTCTTGAAATGCCTTATTTTCTTGGCTTCTAGTGTGTGGATTCCCTATATTTCTCCCACTTCTTTTTATGCCCTTAGTTTTTTAGTTTGTTTGTTTCTGGTTTTGGCTAGTTCCTTTCTCTTTAACTCTAAATGTTGAAGTAGCTGTGATTCAGTTTCCGGATCTTTTCTCTCTTTGCACTCATTCTTTTGTGATCTAACAGTATTTTGCAGTTTTAAAAAAAAATTGGAAATAACTCTAACTGGAGATTCCCACATACTAATTTTTCATTCAGACTTCTTCCCCAGATTTCAGGATACTCAGTTACATACTTGAAACATCCATTTGCATGTCTCAATGGCATTTCAAAGTTAAAATATTGATCATTCCTTTAAACCCAGTGCCTCCATCTTTAGTCCCATCTCAGGAAAAAATCAATTTTATCTTTCCAGCAGCACAGGCCCACAAAGCCTCCATTTCACACTTGGCTTCTCTCTTCCACACTCTACATCTATATTATTATTTAAAAAAAAAATCCTATTGTAGCTACTTTAAAAATACTTTCAAAATCTGACCACTTCTCTTCTTCCTCCCCACTCTCACAGTGTCACAACCCTGGCTGAAACCGTGATTTTCTTACCTGCTTTGTTATACTTGACACTAGCTGGTATCCTTGTTGCCACTCTTGTTTCTTTATAGTCTTCTATTAACACAGAAGCCAACGTGATCCTTTGGAAATATAGTCATGTCATTCTATTCTTCATAAGGCCCTCTGATGACTTCCTATCCCACTACAAATACAACATTATAATGGCCTCTAAGAACCCTACAATTTGTATCACCACCACCACCACCACCACACTTCCCTTGCGTCTTTGCCTTTCTTTCCTCCTGTGTTGCCTTTATCTTTATATGCATGTGGTGATCTTCTTGATGCTCCTGTGACCAGGTAAGCTCTAGCCTCACTGCCATTGCACATGGGGTTCTTCCTATGTATAACACTGCTGCCTCAGATATCCACATAGTTGTACTTTCTCGTCTTCTTTAAGTCTTTGTCCAAAGTCTACATTCTCAGTGAAGAGCTCACTGACCACCCTAT	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_662:HG3_PB_HySA_867:HG3_PB_assemblyticsfalcon_801:HG2_10X_allpass_72:HG2_PB_assemblyticsfalcon_848:HG2_Ill_tnscope_50:HG4_PB_assemblyticsfalcon_798:HG4_PB_SVrefine2Falcon1Dovetail_386:HG3_Ill_SVrefine2DISCOVARDovetail_439:HG3_Ill_MetaSV_132:HG3_Ill_GATKHCSBGrefine_350:HG3_10X_allpass_100:HG2_PB_pbsv_606:HG2_PB_assemblyticsPBcR_833:HG2_PB_SVrefine2PBcRplusDovetail_410:HG2_PB_SVrefine2Falcon1plusDovetail_419:HG2_Ill_MetaSV_152:HG2_Ill_GATKHCSBGrefine_338:HG2_10X_SVrefine210Xhap12_466:HG3_PB_pbsv_612:HG3_Ill_Krunchall_689;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_466:HG2_Ill_GATKHCSBGrefine_338:HG2_Ill_MetaSV_152:HG2_PB_SVrefine2Falcon1plusDovetail_419:HG2_PB_SVrefine2PBcRplusDovetail_410:HG2_PB_assemblyticsPBcR_833:HG2_PB_pbsv_606:HG3_10X_allpass_100:HG3_Ill_GATKHCSBGrefine_350:HG3_Ill_MetaSV_132:HG3_Ill_SVrefine2DISCOVARDovetail_439:HG4_PB_SVrefine2Falcon1Dovetail_386:HG4_PB_assemblyticsfalcon_798;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00803213;ClusterMaxSizeDiff=0.00803213;ClusterMaxEditDist=0.00803213;PBcalls=10;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1248;DistBack=2640;DistForward=23584;DistMin=2640;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:80221781-80223030;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=114.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:32:0|1:43:4:4:34:0|1:59:0:1:27:0/1:39:10:0/1:98:49:1309:.:.
chr1	81049863	HG2_Ill_GATKHC_852	AACACTCACTGTGAGGGTGTGCGGCTTCACTCCTGAAGTCAGTGAGACCATGAACCCACTGGGAGGAACAAATAACTCTGGACACGCCACCTTTAAGAGCTGTG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_618:HG2_PB_assemblyticsfalcon_860:HG2_PB_assemblyticsPBcR_843:HG4_PB_SVrefine2PBcRDovetail_352:HG4_Ill_SVrefine2DISCOVARDovetail_417:HG2_PB_SVrefine2PBcRplusDovetail_413:HG2_PB_SVrefine2PB10Xhap12_516:HG2_PB_SVrefine2Falcon1plusDovetail_422:HG2_Ill_SVrefine2DISCOVARplusDovetail_467:HG2_10X_SVrefine210Xhap12_471:HG4_Ill_Krunchall_709:HG2_Ill_Krunchall_675:HG2_PB_HySA_1141:HG2_PB_pbsv_610:HG4_Ill_svaba_659:HG4_Ill_scalpel_475:HG4_Ill_manta_129:HG4_Ill_GATKHC_852:HG4_Ill_GATKHCSBGrefine_383:HG4_Ill_250bpfermikitraw_683:HG4_Ill_150bpfermikitraw_657:HG2_Ill_svaba_654:HG2_Ill_scalpel_509:HG2_Ill_SpiralSDKrefine_489:HG2_Ill_GATKHC_852:HG2_Ill_GATKHCSBGrefine_343;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_343:HG2_Ill_GATKHC_852:HG2_Ill_SpiralSDKrefine_489:HG2_Ill_scalpel_509:HG2_Ill_svaba_654:HG4_Ill_150bpfermikitraw_657:HG4_Ill_250bpfermikitraw_683:HG4_Ill_GATKHCSBGrefine_383:HG4_Ill_GATKHC_852:HG4_Ill_manta_129:HG4_Ill_scalpel_475:HG4_Ill_svaba_659;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0192308;ClusterMaxSizeDiff=0.0192308;ClusterMaxEditDist=0.0869565;PBcalls=9;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-103;DistBack=16666;DistForward=28268;DistMin=16666;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=179;REFWIDENED=1:81049743-81050024;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:29:1:2:33:0|1:37:2:0:21:0/1:45:22:./.:.:.:.:.:.
chr1	81194341	HG2_10X_SVrefine210Xhap12_474	GAAAACTGGCTGGTGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_PB_HySA_1143:HG2_PB_assemblyticsfalcon_862:HG4_Ill_Krunchall_711:HG3_Ill_Krunchall_697:HG4_Ill_Spiral_41:HG2_PB_pbsv_612:HG3_PB_SVrefine2Falcon1Dovetail_383:HG4_Ill_MetaSV_162:HG3_Ill_MetaSV_135:HG2_Ill_tnscope_51:HG2_Ill_MetaSV_155:HG4_PB_pbsv_621:HG4_PB_SVrefine2Falcon1Dovetail_389:HG4_Ill_manta_130:HG4_Ill_GATKHCSBGrefine_386:HG4_10X_allpass_73:HG3_PB_pbsv_620:HG3_PB_assemblyticsfalcon_813:HG3_Ill_scalpel_546:HG3_Ill_SVrefine2DISCOVARDovetail_444:HG3_Ill_GATKHCSBGrefine_355:HG3_10X_allpass_101:HG2_PB_SVrefine2Falcon1plusDovetail_423:HG2_Ill_scalpel_510:HG2_Ill_manta_140:HG2_Ill_breakscan11_73:HG2_Ill_GATKHCSBGrefine_345:HG2_10X_allpass_73:HG2_10X_SVrefine210Xhap12_474;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_474:HG2_10X_allpass_73:HG2_Ill_GATKHCSBGrefine_345:HG2_Ill_breakscan11_73:HG2_Ill_manta_140:HG2_Ill_scalpel_510:HG2_PB_SVrefine2Falcon1plusDovetail_423:HG3_10X_allpass_101:HG3_Ill_GATKHCSBGrefine_355:HG3_Ill_SVrefine2DISCOVARDovetail_444:HG3_Ill_scalpel_546:HG3_PB_assemblyticsfalcon_813:HG3_PB_pbsv_620:HG4_10X_allpass_73:HG4_Ill_GATKHCSBGrefine_386:HG4_Ill_manta_130:HG4_PB_SVrefine2Falcon1Dovetail_389:HG4_PB_pbsv_621;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0713178;ClusterMaxSizeDiff=0.0713178;ClusterMaxEditDist=0.0713178;PBcalls=9;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-327;DistForward=-316;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=1:81194342-81194680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:26:0|1:38:1:1:23:0|1:41:0:0:33:0/1:22:17:0/1:33:10:.:.:.
chr1	81404757	HG3_PB_pbsv_622	AAAAGTCTCACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTATATATTTTTCTTTATTTGTTTTTCACTTAACATTGTATCAGGACCATATCATTAAAATTTTTTGAACATTTAATTTTTTTTTTTTTTTTATTTTTTATTTTATTTTTTATTTTTTTGTTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACTTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTGAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAAGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTACTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCAGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCATCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTCTGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAAGTATGTGGTCGATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTTGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATGATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACATGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCAGCTGGTACCGGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTTTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGTGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGATGCAGGTCTGTTGGAATACCCTGCTGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGTTCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCTGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCTGCCTTGCAGTTTGGTCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCATGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCAGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCC	A	20	PASS	ClusterIDs=HG4_Ill_Krunchall_713:HG4_PB_HySA_864:HG4_PB_assemblyticsfalcon_810:HG2_PB_assemblyticsPBcR_846:HG4_10X_allpass_74:HG2_10X_allpass_74:HG4_Ill_Krunchall_714:HG3_Ill_Krunchall_699:HG2_Ill_breakscan11_74:HG4_PB_pbsv_622:HG4_PB_SVrefine2PBcRDovetail_355:HG4_Ill_GATKHCSBGrefine_387:HG3_PB_pbsv_622:HG3_PB_assemblyticsfalcon_816:HG3_Ill_GATKHCSBGrefine_357:HG2_PB_pbsv_613:HG2_PB_SVrefine2PBcRplusDovetail_415:HG2_10X_SVrefine210Xhap12_475:HG2_Ill_tnscope_52:HG2_Ill_MetaSV_156:HG4_Ill_MetaSV_163:HG3_Ill_MetaSV_137;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_475:HG2_PB_SVrefine2PBcRplusDovetail_415:HG2_PB_pbsv_613:HG3_Ill_GATKHCSBGrefine_357:HG3_PB_assemblyticsfalcon_816:HG3_PB_pbsv_622:HG4_Ill_GATKHCSBGrefine_387:HG4_PB_SVrefine2PBcRDovetail_355:HG4_PB_pbsv_622;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0170322;ClusterMaxSizeDiff=0.0170322;ClusterMaxEditDist=0.0170322;PBcalls=9;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-6191;DistBack=48;DistForward=-6177;DistMin=-6177;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:81404758-81410963;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=117.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:34:0|1:37:0:0:21:0|1:36:0:0:33:0/1:29:8:0/1:354:309:6502:.:.
chr1	81687784	HG3_10X_allpass_102	TAAAAATGTGTTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_551:HG2_PB_assemblyticsfalcon_864:HG2_PB_assemblyticsPBcR_849:HG3_Ill_Krunchall_703:HG2_Ill_Krunchall_678:HG2_PB_pbsv_616:HG3_PB_pbsv_625:HG4_Ill_MetaSV_168:HG3_Ill_MetaSV_140:HG2_PB_HySA_1149:HG2_Ill_tnscope_54:HG2_Ill_MetaSV_159:HG4_PB_assemblyticsfalcon_813:HG4_PB_SVrefine2PBcRDovetail_357:HG4_PB_SVrefine2Falcon1Dovetail_391:HG4_Ill_SVrefine2DISCOVARDovetail_423:HG4_Ill_GATKHCSBGrefine_390:HG4_10X_allpass_75:HG3_PB_assemblyticsfalcon_819:HG3_PB_SVrefine2Falcon1Dovetail_384:HG3_Ill_GATKHCSBGrefine_359:HG3_10X_allpass_102:HG2_PB_SVrefine2PBcRplusDovetail_418:HG2_PB_SVrefine2PB10Xhap12_518:HG2_PB_SVrefine2Falcon1plusDovetail_425:HG2_Ill_SVrefine2DISCOVARplusDovetail_470:HG2_Ill_GATKHCSBGrefine_347:HG2_10X_allpass_75:HG2_10X_SVrefine210Xhap12_477:HG4_PB_pbsv_625:HG2_Ill_breakscan11_75:HG4_Ill_Spiral_42;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_477:HG2_10X_allpass_75:HG2_Ill_GATKHCSBGrefine_347:HG2_Ill_SVrefine2DISCOVARplusDovetail_470:HG2_PB_SVrefine2Falcon1plusDovetail_425:HG2_PB_SVrefine2PB10Xhap12_518:HG2_PB_SVrefine2PBcRplusDovetail_418:HG3_10X_allpass_102:HG3_Ill_GATKHCSBGrefine_359:HG3_PB_SVrefine2Falcon1Dovetail_384:HG3_PB_assemblyticsfalcon_819:HG4_10X_allpass_75:HG4_Ill_GATKHCSBGrefine_390:HG4_Ill_SVrefine2DISCOVARDovetail_423:HG4_PB_SVrefine2Falcon1Dovetail_391:HG4_PB_SVrefine2PBcRDovetail_357:HG4_PB_assemblyticsfalcon_813;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0709877;ClusterMaxSizeDiff=0.0709877;ClusterMaxEditDist=0.0709877;PBcalls=14;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=26412;DistForward=13696;DistMin=13696;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=1:81687785-81688125;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:1:19:0:20:1/1:0:16:0:18:1/1:0:41:0/1:3:14:.:.:.
chr1	82963291	HG2_Ill_SVrefine2DISCOVARplusDovetail_477	TGCTGCATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_HySA_1162:HG4_PB_assemblyticsfalcon_822:HG2_PB_assemblyticsPBcR_860:HG2_Ill_Krunchall_691:HG3_Ill_Krunchall_710:HG4_Ill_Krunchall_728:HG3_Ill_Krunchall_709:HG4_PB_pbsv_628:HG2_PB_pbsv_619:HG4_Ill_MetaSV_169:HG3_Ill_MetaSV_143:HG2_Ill_tnscope_55:HG4_PB_SVrefine2PBcRDovetail_359:HG4_Ill_scalpel_488:HG4_Ill_GATKHCSBGrefine_393:HG4_10X_allpass_76:HG3_PB_assemblyticsfalcon_827:HG3_PB_SVrefine2Falcon1Dovetail_385:HG3_Ill_scalpel_552:HG3_Ill_manta_111:HG3_Ill_GATKHCSBGrefine_362:HG3_10X_allpass_103:HG2_PB_assemblyticsfalcon_874:HG2_PB_SVrefine2PBcRplusDovetail_423:HG2_PB_SVrefine2PB10Xhap12_522:HG2_PB_SVrefine2Falcon1plusDovetail_429:HG2_Ill_scalpel_516:HG2_Ill_manta_142:HG2_Ill_SVrefine2DISCOVARplusDovetail_477:HG2_Ill_MetaSV_161:HG2_Ill_GATKHCSBGrefine_350:HG2_10X_allpass_76:HG2_10X_SVrefine210Xhap12_482:HG3_PB_pbsv_630:HG2_Ill_breakscan11_76;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_482:HG2_10X_allpass_76:HG2_Ill_GATKHCSBGrefine_350:HG2_Ill_MetaSV_161:HG2_Ill_SVrefine2DISCOVARplusDovetail_477:HG2_Ill_manta_142:HG2_Ill_scalpel_516:HG2_PB_SVrefine2Falcon1plusDovetail_429:HG2_PB_SVrefine2PB10Xhap12_522:HG2_PB_SVrefine2PBcRplusDovetail_423:HG2_PB_assemblyticsfalcon_874:HG3_10X_allpass_103:HG3_Ill_GATKHCSBGrefine_362:HG3_Ill_manta_111:HG3_Ill_scalpel_552:HG3_PB_SVrefine2Falcon1Dovetail_385:HG3_PB_assemblyticsfalcon_827:HG4_10X_allpass_76:HG4_Ill_GATKHCSBGrefine_393:HG4_Ill_scalpel_488:HG4_PB_SVrefine2PBcRDovetail_359;NumExactMatchSVs=21;ClusterMaxShiftDist=0.128244;ClusterMaxSizeDiff=0.128244;ClusterMaxEditDist=0.128244;PBcalls=13;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=393;DistForward=59166;DistMin=393;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=1:82963292-82963628;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:47:0|1:29:4:0:42:1|0:0:18:44:0:0/1:16:21:0/1:26:4:.:.:.
chr1	83125958	HG3_Ill_SVrefine2DISCOVARDovetail_450	TAAAAAAAATGGTTCATGCACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAGATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAATAAAATAAAAAAAAAAAAATAAAAAAAAAAGAATTGTAAAAAAAAAAATTATAAATAAAACAAAGAAGAATATGTGAGAGGAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_485:HG4_PB_pbsv_630:HG2_10X_allpass_78:HG3_10X_allpass_105:HG4_Ill_MetaSV_171:HG3_Ill_MetaSV_145:HG2_Ill_MetaSV_163:HG4_Ill_Krunchall_731:HG2_Ill_Krunchall_694:HG3_Ill_Krunchall_712:HG3_PB_assemblyticsfalcon_829:HG2_PB_assemblyticsfalcon_877:HG4_PB_assemblyticsfalcon_826:HG2_PB_assemblyticsPBcR_864:HG2_PB_pbsv_621:HG3_PB_pbsv_632:HG2_Ill_tnscope_56:HG4_PB_SVrefine2PBcRDovetail_361:HG4_Ill_SVrefine2DISCOVARDovetail_428:HG4_Ill_GATKHCSBGrefine_395:HG4_10X_allpass_78:HG3_Ill_SVrefine2DISCOVARDovetail_450:HG3_Ill_GATKHCSBGrefine_364:HG2_PB_SVrefine2PBcRplusDovetail_426:HG2_PB_SVrefine2PB10Xhap12_523:HG2_PB_SVrefine2Falcon1plusDovetail_431:HG2_Ill_breakscan11_78:HG2_Ill_SVrefine2DISCOVARplusDovetail_479:HG2_Ill_GATKHCSBGrefine_352;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_485:HG4_PB_SVrefine2PBcRDovetail_361:HG4_Ill_SVrefine2DISCOVARDovetail_428:HG4_Ill_GATKHCSBGrefine_395:HG4_10X_allpass_78:HG3_Ill_SVrefine2DISCOVARDovetail_450:HG3_Ill_GATKHCSBGrefine_364:HG2_PB_SVrefine2PBcRplusDovetail_426:HG2_PB_SVrefine2PB10Xhap12_523:HG2_PB_SVrefine2Falcon1plusDovetail_431:HG2_Ill_breakscan11_78:HG2_Ill_SVrefine2DISCOVARplusDovetail_479:HG2_Ill_GATKHCSBGrefine_352;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0304159;ClusterMaxSizeDiff=0.0304159;ClusterMaxEditDist=0.0304159;PBcalls=11;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1611;DistBack=15514;DistForward=-1595;DistMin=-1595;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:83125959-83127587;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:62:1/1:0:24:0:21:1/1:0:43:0:29:1/1:0:24:1/1:4:82:1656:.:.
chr1	83149850	HG3_Ill_150bpfermikitraw_650	TCCACAGATTTAAGAGAATACGAGAGAGCATGAAGGAATGAGAAAAATAAATGAATGCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_880:HG3_Ill_GATKHC_908:HG4_Ill_GATKHC_869:HG4_Ill_GATKHCSBGrefine_396:HG4_CG_vcfBeta_371:HG2_Ill_GATKHC_875:HG2_Ill_GATKHCSBGrefine_354:HG3_Ill_GATKHCSBGrefine_365:HG2_Ill_GATKHC_874:HG2_Ill_GATKHCSBGrefine_353:HG2_CG_vcfBeta_343:HG2_Ill_SpiralSDKrefine_502:HG4_Ill_manta_133:HG3_Ill_manta_112:HG3_CG_vcfBeta_324:HG2_PB_PB10Xdip_2719:HG2_Ill_manta_143:HG4_Ill_Spiral_43:HG2_Ill_Spiral_28:HG3_Ill_Spiral_558:HG3_PB_HySA_892:HG4_PB_pbsv_631:HG4_Ill_svaba_673:HG4_Ill_Krunchall_734:HG4_Ill_250bpfermikitraw_702:HG4_Ill_150bpfermikitraw_674:HG4_10X_allpass_79:HG3_Ill_svaba_692:HG3_Ill_scalpel_556:HG3_Ill_Krunchall_714:HG3_Ill_250bpfermikitraw_693:HG3_Ill_150bpfermikitraw_650:HG3_10X_allpass_106:HG2_PB_pbsv_622:HG2_Ill_svaba_669:HG2_Ill_scalpel_521:HG2_Ill_Krunchall_698:HG2_Ill_250bpfermikitraw_711:HG2_Ill_150bpfermikitraw_639:HG3_PB_pbsv_634:HG4_PB_assemblyticsfalcon_828:HG3_PB_assemblyticsfalcon_832;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_639:HG2_Ill_250bpfermikitraw_711:HG2_Ill_Krunchall_698:HG2_Ill_scalpel_521:HG2_Ill_svaba_669:HG2_PB_pbsv_622:HG3_10X_allpass_106:HG3_Ill_150bpfermikitraw_650:HG3_Ill_250bpfermikitraw_693:HG3_Ill_Krunchall_714:HG3_Ill_scalpel_556:HG3_Ill_svaba_692:HG4_10X_allpass_79:HG4_Ill_150bpfermikitraw_674:HG4_Ill_250bpfermikitraw_702:HG4_Ill_Krunchall_734:HG4_Ill_svaba_673:HG4_PB_pbsv_631;NumExactMatchSVs=18;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.240741;PBcalls=8;Illcalls=29;TenXcalls=2;CGcalls=3;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=12;NumTechs=4;NumTechsExact=3;SVLEN=-58;DistBack=-41;DistForward=18643;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:83149849-83149909;PctSeqSimilarity=0.9833;PctSizeSimilarity=0.9667;PctRecOverlap=0.9672;SizeDiff=-2;StartDistance=0;EndDistance=-2;GTMatch=0;TruScore=97;MatchId=121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:1/1:2:16:0:41:1/1:0:19:0:22:1/1:0:33:./.:.:.:.:.:.
chr1	84517925	HG2_PB_SVrefine2Falcon1plusDovetail_434	TTGATTTGTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGCTTTATGGGGCACATTCAGCTCCTCTCACATATTCTTCTTTGTTTTATTTATAATTTTTTTTTTTACAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGCCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGTATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAGTGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCATTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAAGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATATAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCTCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGGTGTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCTACAATTCTTCCACTGTGAGAGTTACCCAAAGCTCGGCGTCTGTGATGGTCTACCGGGCCTCCGAGGCGATCGAGCAGCATCAGTCTTCAGCCGCTAAGCCGAGAAGGAGTCTGTCAGAGAGCCTTGGGCCAGAGTTCCACAGGCTCTGGGAGTGGCTGCCAGGTGAGTTGAACAGTCCAATTTCCAGTGGGGTCCCGCACAGATGGGACACAGCTTAGGAGGAATCCTGGGCTGCAGGCATTCCTTGGCCTGGTGGTCAGATTTCTGGCACTTGTAGAGAGCTCCTGGGGGAGGAGTTTCTGGAGGAACGCCTGGCCGCTGCAGTTCAGGCGTTTGGAAGTTCTTGTGTGCTGGAGATGTGGCGGATTTGAAATTGGTGAGATGTTTCTTGGGCTGGTCGGTCTGAAGACCTGAGGTCGTAGGTTGATCTTTCTCACGGAGCAAAGAGCAGGAGGACGGGGGATTGATCTCCCAAGGGAGGTCCCCCGATCTGAGTCACGGCACCAAATTTCACGCGCGTCCATGTGAAGAGACCACCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_165:HG3_10X_allpass_107:HG4_10X_allpass_83:HG2_10X_allpass_81:HG4_PB_pbsv_637:HG3_PB_pbsv_642:HG4_Ill_Krunchall_746:HG3_Ill_Krunchall_732:HG2_Ill_Krunchall_714:HG4_PB_assemblyticsfalcon_834:HG3_PB_assemblyticsfalcon_840:HG2_PB_assemblyticsfalcon_891:HG2_PB_assemblyticsPBcR_874:HG2_PB_HySA_1180:HG4_PB_SVrefine2PBcRDovetail_366:HG4_PB_SVrefine2Falcon1Dovetail_394:HG4_Ill_SVrefine2DISCOVARDovetail_434:HG4_Ill_MetaSV_173:HG3_PB_SVrefine2PBcRDovetail_369:HG3_PB_SVrefine2Falcon1Dovetail_387:HG3_Ill_SVrefine2DISCOVARDovetail_452:HG2_PB_pbsv_629:HG2_PB_SVrefine2PBcRplusDovetail_429:HG2_PB_SVrefine2PB10Xhap12_528:HG2_PB_SVrefine2Falcon1plusDovetail_434:HG2_Ill_SpiralSDKrefine_512:HG2_Ill_SVrefine2DISCOVARplusDovetail_483:HG2_10X_SVrefine210Xhap12_490:HG3_Ill_MetaSV_147:HG2_Ill_tnscope_57;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_490:HG2_Ill_SVrefine2DISCOVARplusDovetail_483:HG2_Ill_SpiralSDKrefine_512:HG2_PB_SVrefine2Falcon1plusDovetail_434:HG2_PB_SVrefine2PB10Xhap12_528:HG2_PB_SVrefine2PBcRplusDovetail_429:HG2_PB_pbsv_629:HG3_Ill_SVrefine2DISCOVARDovetail_452:HG3_PB_SVrefine2Falcon1Dovetail_387:HG3_PB_SVrefine2PBcRDovetail_369:HG4_Ill_MetaSV_173:HG4_Ill_SVrefine2DISCOVARDovetail_434:HG4_PB_SVrefine2Falcon1Dovetail_394:HG4_PB_SVrefine2PBcRDovetail_366;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0354125;ClusterMaxSizeDiff=0.0354125;ClusterMaxEditDist=0.0354125;PBcalls=15;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6704;DistBack=24700;DistForward=4098;DistMin=4098;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:84517926-84524643;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:133:1/1:0:14:0:13:1/1:0:39:0:38:1/1:0:48:1/1:0:445:6707:.:.
chr1	85748620	HG4_10X_allpass_84	AAGGCCAGTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCAGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_168:HG2_10X_allpass_82:HG4_PB_assemblyticsfalcon_844:HG2_PB_assemblyticsfalcon_903:HG2_PB_assemblyticsPBcR_888:HG4_Ill_Spiral_44:HG2_Ill_Spiral_29:HG4_Ill_Krunchall_759:HG2_Ill_Krunchall_727:HG2_PB_pbsv_635:HG4_PB_HySA_892:HG4_PB_SVrefine2PBcRDovetail_369:HG4_PB_SVrefine2Falcon1Dovetail_399:HG4_Ill_scalpel_503:HG4_Ill_manta_140:HG4_Ill_SVrefine2DISCOVARDovetail_438:HG4_Ill_GATKHCSBGrefine_410:HG4_10X_allpass_84:HG2_PB_SVrefine2PBcRplusDovetail_433:HG2_PB_SVrefine2Falcon1plusDovetail_438:HG2_PB_HySA_1194:HG2_Ill_scalpel_537:HG2_Ill_manta_147:HG2_Ill_SVrefine2DISCOVARplusDovetail_486:HG2_Ill_GATKHCSBGrefine_364:HG2_10X_SVrefine210Xhap12_495:HG4_PB_pbsv_644:HG4_Ill_MetaSV_175:HG2_Ill_tnscope_58:HG2_Ill_breakscan11_79;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_495:HG2_Ill_GATKHCSBGrefine_364:HG2_Ill_SVrefine2DISCOVARplusDovetail_486:HG2_Ill_manta_147:HG2_Ill_scalpel_537:HG2_PB_HySA_1194:HG2_PB_SVrefine2Falcon1plusDovetail_438:HG2_PB_SVrefine2PBcRplusDovetail_433:HG4_10X_allpass_84:HG4_Ill_GATKHCSBGrefine_410:HG4_Ill_SVrefine2DISCOVARDovetail_438:HG4_Ill_manta_140:HG4_Ill_scalpel_503:HG4_PB_SVrefine2Falcon1Dovetail_399:HG4_PB_SVrefine2PBcRDovetail_369;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0837209;ClusterMaxSizeDiff=0.0837209;ClusterMaxEditDist=0.0837209;PBcalls=11;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=66154;DistForward=-270;DistMin=-270;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:85748621-85748964;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=123.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:0|1:28:1:2:23:0|1:40:0:0:17:0/1:22:10:0/1:21:5:.:.:.
chr1	86740980	HG2_Ill_manta_148	TAAATCTACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_30:HG2_PB_HySA_1202:HG2_PB_assemblyticsfalcon_908:HG4_10X_allpass_86:HG2_10X_allpass_83:HG4_Ill_Krunchall_765:HG3_Ill_Krunchall_755:HG2_Ill_Krunchall_737:HG4_PB_assemblyticsfalcon_848:HG3_PB_assemblyticsfalcon_856:HG2_PB_assemblyticsPBcR_894:HG4_Ill_MetaSV_178:HG2_Ill_tnscope_59:HG4_PB_pbsv_650:HG4_PB_SVrefine2Falcon1Dovetail_402:HG4_Ill_manta_142:HG4_Ill_SVrefine2DISCOVARDovetail_443:HG4_Ill_GATKHCSBGrefine_412:HG3_PB_pbsv_654:HG3_PB_SVrefine2PBcRDovetail_374:HG3_PB_SVrefine2Falcon1Dovetail_395:HG3_Ill_GATKHCSBGrefine_375:HG3_10X_allpass_108:HG2_PB_pbsv_639:HG2_PB_SVrefine2PBcRplusDovetail_437:HG2_PB_SVrefine2PB10Xhap12_534:HG2_PB_SVrefine2Falcon1plusDovetail_441:HG2_Ill_manta_148:HG2_Ill_SVrefine2DISCOVARplusDovetail_490:HG2_Ill_MetaSV_169:HG2_Ill_GATKHCSBGrefine_365:HG2_10X_SVrefine210Xhap12_500:HG2_Ill_breakscan11_80:HG3_Ill_MetaSV_151:HG4_Ill_Spiral_46:HG3_Ill_Spiral_583;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_500:HG2_Ill_GATKHCSBGrefine_365:HG2_Ill_MetaSV_169:HG2_Ill_SVrefine2DISCOVARplusDovetail_490:HG2_Ill_manta_148:HG2_PB_SVrefine2Falcon1plusDovetail_441:HG2_PB_SVrefine2PB10Xhap12_534:HG2_PB_SVrefine2PBcRplusDovetail_437:HG2_PB_pbsv_639:HG3_10X_allpass_108:HG3_Ill_GATKHCSBGrefine_375:HG3_PB_SVrefine2Falcon1Dovetail_395:HG3_PB_SVrefine2PBcRDovetail_374:HG3_PB_pbsv_654:HG4_Ill_GATKHCSBGrefine_412:HG4_Ill_SVrefine2DISCOVARDovetail_443:HG4_Ill_manta_142:HG4_PB_SVrefine2Falcon1Dovetail_402:HG4_PB_pbsv_650;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0209059;ClusterMaxSizeDiff=0.0209059;ClusterMaxEditDist=0.0222841;PBcalls=14;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-717;DistBack=58611;DistForward=10734;DistMin=10734;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=1:86740981-86741703;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:0:6:0:5:1/1:0:37:0:37:1/1:0:28:0/1:4:26:.:.:.
chr1	89475845	HG2_PB_SVrefine2PB10Xhap12_542	GCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCACACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGCGCCTGCCACCACGCTCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTTGATCTCCTGACCTTGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTAGTTAACTAGTATTTGAAAGACAGGGTCTGGCTCTGTTGCCCAGGCCAGAGTGCTGAGGTGCAATCTTGGCTCACTGAACCTCCCGGGCTCAAGCAATTCTCCTGCCTCAGCCTTCTGAGTAGCTGGGACTACAGGCATGTGCAACAGTGCCCAGCTAATTTTTATATTCTTACTAGAGACATGTTTCACCATGTTGCTCAGGCTGGTCTTAAACTCCTGAGCTCAAGCAATCTGCCTGCCTCTGCCCTCAAAGTGTTAGGATTACAGGCTTGAGCCACCGCACCCGCCGACTGCACTCTCTTTGATGAGCACCTGGGACATACCTGATATAACAGTCTCCCTCCCTGCATATGTTATTGAATGAAAGCATGAATGTTATACAGACAAAAAAGCACATCTGTGTGCAGTGAAGCTTGGTCACTTTGGTGTTCGTAGGAGGTAGGTCAGCAGGTTTCCATAATCGACAGATGAATCTTGGTTACCTGTATCCCCTTCCTTGGTTCCTCATAGTACTTTTTCTCCAGGTCTTGTAGCTTCTGAATAAAGAGACAATAGCCCCCTGGTTTCGAATAAATTCCCGCCTTCACTTCTTCTTCTAGAGGACTGAAAATGACCTGAAGTAAAGCTGAGCAACGATCTGATGATGCTTCTTGATTCTGTTTACAAAAGTCATCCCGCTTTTTGTCTAGCTGGGCCTTTAATGTAAAAATAGGAAGTAAAAAGAGTAACAGGGAAAGGATGTTAGCTTGACCTCAGAATTTTGGGAAAGACTTCCGAAAATAAACAGTCAATGATGCCGGAGAAACTGACAGACTCCTCAGCAGGACCACGCTCTTACTCCTGACCCCACTTTCTACTGAAATCGCTTTCTCTTTAGAGGTGAGGTTCAGGGCTGAGATTGACAGCTTTATGTCAACTGTTAGAGGAAAGCTCTGCTTTTGCATATTGGACTAATGATTTCATATGGAATAAATGTGGCTGAACAGAAGCCTGCTCAAGATAACTAAGATGAAAATTTTCTTTGCATTTGGCTAGAATATCAAATCAGTCTGAGAAGAGTGGGCATGTAATTTGATTAGAAGCCCTGATTGTCAGTTATATGAATTTAATAAAGGGAAGACCATTTATTGATAAGCAATGTTTTTAAACTTTGAGTCTGAAGTAATAAAATTGTTTTTGTCTGATTATTATGATTACCAAGAACTAGTTGTCACCATTTTAAAATCTAGAATAATTATTTGTCTCAAAATAAATACCAATTTCATTTCTTAGTAGTACTTTGCCTTCCAAAATCCAAATCCATGTAAATGTGATAGAAAAATTACCGCTAATTTCTTTTGAAACAGATGGTCCACATCCTTGAAAGAGTTCTTCATATAGACTTCAGTGGCCTCCCTCTCACTAACCCTGTGCAGGTCCAGCAGCTCCTGGAGGGTTTCTGCGGGCAGCTGCACCTTCTGGCCCATCTGCTGGTCATAGTGGGCAATAGCCTTTTGCACTGCGGCTGAGTTCTCTATCTGGGCCAAGGCCAGGACTGCGTTCTCCATGCAGGGCAGATCCCCTCTGCTGATAGCATTGATATAGGTCAGCACTAGGCTCTCTAGACCTACATACAAAGAAGAAATGATAATGTTTCTTGTACTAAAGAAAACTCTCTATTCTGTGTAATTCTGAACATGTCAATTTCCACCTATTTTCCTCACAGCATCAAGGTCCTCAGAATCATCTGGAAGCTTGCTGGAAATGCCTATTGTTAGCCTCTGTCCCAGATCTACTGAATTAGAGTTTTTTCTTTGGGTAAGATCCCTAGATGATATGTATGCATATCAACATTTGAGAATCCTTGTTCTAGATGACCTAGTCCTGTGTTAGTTGAATGTTTGCATCCATTTCAACCCCAAGCACCATCAGGAAAGGAACCCATAGCTATTCCATATATGACTGTATCCTCAGCTTATTCACAGTAGCATTTGATCAATACTTATGGAACAAATGATACTCTCCTAATCAAAAGGAGCCCTCCGTTTGGTTTATTTTAGCACAGCATTGTCCAAGAAAACTTTCTGTAATGGTGGAAGTGTTCTGTATGTGCTGTTCAGTATGCTAGCCACTAAGTACATGTAAATATAAGCCTTTGAAATATAGCCATGTGAATTGACCTTTAATTTTTCCTTATTTTAATTAATTTACATTTACATTTAGATAGCCCCACTTGTCTAGTGGCTACTGTACTGTACAGTGCAGGCCCAGTTTACTGTGGCAATTTTAAGTAATAAAACTTTTTTCCTTTGCTTTTCCTATCTTTTCCCACCAAGAAGGTTGACCAACAAAATCTATTAGAAATGTTGGTGTCATCTAGAATTTAGCACAAATGTAGCAGTAGATTGGGATTTTTCAATGCTGATACTAGGTGGAGTTATTCTATGCTCCTTTCATATTTTTTTTTTCCTCTGTCAC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_505:HG2_PB_assemblyticsPBcR_908:HG3_PB_assemblyticsfalcon_873:HG2_10X_allpass_84:HG3_10X_allpass_109:HG3_Ill_MetaSV_153:HG2_Ill_MetaSV_171:HG2_PB_pbsv_645:HG3_PB_HySA_929:HG2_Ill_tnscope_60:HG3_PB_pbsv_660:HG3_PB_SVrefine2PBcRDovetail_380:HG2_PB_SVrefine2PBcRplusDovetail_444:HG2_PB_SVrefine2PB10Xhap12_542:HG2_PB_SVrefine2Falcon1plusDovetail_447:HG2_Ill_SVrefine2DISCOVARplusDovetail_499;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_505:HG3_PB_pbsv_660:HG3_PB_SVrefine2PBcRDovetail_380:HG2_PB_SVrefine2PBcRplusDovetail_444:HG2_PB_SVrefine2PB10Xhap12_542:HG2_PB_SVrefine2Falcon1plusDovetail_447:HG2_Ill_SVrefine2DISCOVARplusDovetail_499;NumExactMatchSVs=7;ClusterMaxShiftDist=0.226123;ClusterMaxSizeDiff=0.226123;ClusterMaxEditDist=0.226123;PBcalls=9;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-2716;DistBack=841;DistForward=-2651;DistMin=-2651;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=247;REFWIDENED=1:89475846-89478808;PctSeqSimilarity=0.9375;PctSizeSimilarity=1;PctRecOverlap=0.9768;SizeDiff=0;StartDistance=-63;EndDistance=-63;GTMatch=0;TruScore=97;MatchId=125.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:45:0|1:39:1:1:21:./.:5:16:63:0:0/1:56:12:0/1:238:81:2782:.:.
chr1	91624771	HG3_PB_SVrefine2PBcRDovetail_385	TAAAAGTGGAGAATCTTCTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACGAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_612:HG3_PB_assemblyticsfalcon_893:HG2_PB_assemblyticsfalcon_942:HG2_PB_assemblyticsPBcR_929:HG4_PB_pbsv_668:HG4_Ill_Krunchall_801:HG3_PB_pbsv_672:HG2_PB_pbsv_656:HG2_Ill_Krunchall_771:HG4_Ill_Spiral_47:HG2_PB_HySA_1245:HG2_Ill_Spiral_31:HG4_PB_HySA_927:HG3_PB_HySA_953:HG4_Ill_MetaSV_183:HG2_PB_HySA_1244:HG2_Ill_MetaSV_172:HG4_PB_assemblyticsfalcon_881:HG4_PB_SVrefine2PBcRDovetail_380:HG4_PB_SVrefine2Falcon1Dovetail_413:HG4_Ill_scalpel_531:HG4_Ill_manta_146:HG4_Ill_SVrefine2DISCOVARDovetail_460:HG4_Ill_GATKHCSBGrefine_427:HG4_10X_allpass_89:HG3_PB_SVrefine2PBcRDovetail_385:HG3_Ill_scalpel_608:HG3_Ill_MetaSV_154:HG3_Ill_GATKHCSBGrefine_385:HG3_10X_allpass_110:HG2_PB_SVrefine2PBcRplusDovetail_448:HG2_PB_SVrefine2PB10Xhap12_549:HG2_Ill_scalpel_567:HG2_Ill_manta_153:HG2_Ill_SVrefine2DISCOVARplusDovetail_508:HG2_Ill_GATKHCSBGrefine_377:HG2_10X_allpass_85:HG2_10X_SVrefine210Xhap12_512:HG2_Ill_breakscan11_81;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_512:HG2_10X_allpass_85:HG2_Ill_GATKHCSBGrefine_377:HG2_Ill_SVrefine2DISCOVARplusDovetail_508:HG2_Ill_manta_153:HG2_Ill_scalpel_567:HG2_PB_SVrefine2PB10Xhap12_549:HG2_PB_SVrefine2PBcRplusDovetail_448:HG3_10X_allpass_110:HG3_Ill_GATKHCSBGrefine_385:HG3_Ill_MetaSV_154:HG3_Ill_scalpel_608:HG3_PB_SVrefine2PBcRDovetail_385:HG4_10X_allpass_89:HG4_Ill_GATKHCSBGrefine_427:HG4_Ill_SVrefine2DISCOVARDovetail_460:HG4_Ill_manta_146:HG4_Ill_scalpel_531:HG4_PB_SVrefine2Falcon1Dovetail_413:HG4_PB_SVrefine2PBcRDovetail_380:HG4_PB_assemblyticsfalcon_881;NumExactMatchSVs=21;ClusterMaxShiftDist=0.112116;ClusterMaxSizeDiff=0.112116;ClusterMaxEditDist=0.112116;PBcalls=16;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-283;DistBack=12332;DistForward=8986;DistMin=8986;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:91624772-91625070;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:79:1/1:1:30:1:34:1/1:0:18:0:18:1/1:0:37:./.:.:.:.:.:.
chr1	92232061	HG2_Ill_breakscan11_82	GATCATTAGAAGCTGATTTACAAAATAAGCATAGCAGGAACTCAATTCCCACAAAATCTGAGTACTGGAGTAATCATTCCACCTGCTACGTGCAGTCAGAGATTGAAGCTGTCCTCACTGGGTTAACAAGAATTCCGGACAGAAAATATAATTAAGCATTAACATGCTGCTCTTTGACCTAGTTTCTTGTAACCAAGTCACATAGCACTAGATTCTCACCATTTGCATCCCCATTGCTCCTATAGATAGATAGGATGTCTGATGTTAGAATCCTAAGGGTTTTGTTTGAGAGTTGCATGAGCAGATCCTGAATTCCAACGGGACAGCTGACACCAACCAGTTTAAAGACTCCCACAAAGGAACCACCAAATCAGCATGAGAACACAGTTTCTTCATCCCCCTGTCCCACGACTTTACCCTGCACTCTTCGACCCATCAACAATCTCCATATTTCAGCCCACCCAAAACCCTTAAAAACTCCAACCCCAAACTCCTGTGGGAGATGGATTTGAGTTTTCCCCCAGTTCAGCAGCTGTACAATTAAACCTCTGTCTCTGCTGCAACCTGGTATCTCAGTGTATTGACTTGCCACGCACGTTGGACAATGAACCTATTATGGCTGTAAGATCTCAATAAGGATTTCTGTTTAAGCAGCATCTTAAAGTTAGTTAATTTGTAATAGCAAAAACAAACAAACAAAACCCCACAAAATGCAGTTGTAGTCAGGTAGCGATTTAAGATGCTCTCAGCAGCAAAGGATGGCATTTGGATTCCCCTGGGCTAAAGTACAATCTTAGAAAGTATATTAACCTGAAGCTGGTAAGGAATTCTTTAGGAGTACAGTGTTACCTTGCTAGCAGAAATCAGAAATCCAGAGAGGAGTAATTACTAAGACATGAACATTCAAAAACACCGCACTTGGATTATTGTTAAAAATCATGGTGGCAGCAGTAGTAATAACCATCATCATCATCATCTCCTAAGGAAAGACAATAGGTAGATCCATGGCTCCTGTTGAGATTTGCTGCTCTCATCAAAAGGAAGTGCTCTGCGTAATATCTAATTACTCCCATCTTAAAGGTAAAGAAATTGGTGTTCTTGCCAAAGTCATATGGCTAGAAAATGACAGTGCTGGAAGTAGAATGAATGTCTCTCCCTGTCTGTCTGTCTGTCTCTCCCCCTACCTACCCACCCCCATCTTTAATCTTGGGTGTTAGTCTTGGGACATAGAGGAGAATGGGAAGCTGCTCTATAGCAGTAAGAGGCAGGAACT	G	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_383:HG4_10X_allpass_91:HG2_PB_pbsv_659:HG2_10X_allpass_87:HG2_PB_assemblyticsPBcR_934:HG2_Ill_tnscope_61:HG4_PB_pbsv_673:HG4_PB_SVrefine2Falcon1Dovetail_416:HG4_Ill_SVrefine2DISCOVARDovetail_464:HG3_PB_assemblyticsfalcon_898:HG3_PB_SVrefine2Falcon1Dovetail_399:HG2_PB_SVrefine2PBcRplusDovetail_450:HG2_PB_SVrefine2PB10Xhap12_553:HG2_Ill_breakscan11_82:HG2_Ill_SpiralSDKrefine_554:HG2_Ill_MetaSV_174:HG2_10X_SVrefine210Xhap12_516:HG4_Ill_MetaSV_185:HG4_Ill_Krunchall_809;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_516:HG2_Ill_MetaSV_174:HG2_Ill_SpiralSDKrefine_554:HG2_Ill_breakscan11_82:HG2_PB_SVrefine2PB10Xhap12_553:HG2_PB_SVrefine2PBcRplusDovetail_450:HG3_PB_SVrefine2Falcon1Dovetail_399:HG3_PB_assemblyticsfalcon_898:HG4_Ill_SVrefine2DISCOVARDovetail_464:HG4_PB_SVrefine2Falcon1Dovetail_416:HG4_PB_pbsv_673;NumExactMatchSVs=11;ClusterMaxShiftDist=0.240964;ClusterMaxSizeDiff=0.240964;ClusterMaxEditDist=0.242381;PBcalls=9;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1272;DistBack=-33;DistForward=-1248;DistMin=-1248;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:92232062-92233335;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:45:37:0|1:38:12:5:17:0|1:73:0:0:29:./.:51:5:0/1:92:52:1247:.:.
chr1	92483170	HG2_PB_HySA_1256	AGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCTAGCCTGTAGTATGTTATTAATAATCACTCCTTTGCATGCCCTGTCAACTCCATTGCTCCTTTCTTTGTTGTATTCGCTTGGCAAAGCTCAAATCCTTATTAAATATGAACGCCTACTTTGCACTCAGGAAGCTGAGTGTGGTTAGAGAAAGATATGTGACCATGATAACCAGTCTCACTTTAAATTTGTGAGCATAAATTCAAATTAACTTTAATGCTGCCCAGAAGTCTTACTGTTTCCATGGTTCATTTACTCTCCCTAGGGAGTCAACTATTTTATATCTCCATTCTACTCAGACCACTAATCAACACTACCCCACCATCAGTCTATGCTACCTATTTCTTGCTTCTCTTGGACTGAGAACAGAAGCAATCTGAGGAGACCTTCCACAGACTTCCAAAACCACATCTACAAGCATCACTATTCAGATGCTCTGCTATCTCCTGTTACAAAAGATGAATTGTCTGTGCTCTCATTTAAGGGGAATCTCTTATTTTTTACCTTCCTAAGGGCATTCTACCAATTTTGGTTTCTACCATCAGTGTTTCCTCCTATAAATAATTATTAGCTTATACACTGGTTTTTCTGTAAGTACAATTCAATTAGAAGAAAACCTGGGTTTTCTTCTCTAAGTTGGCTCCTCACATCCTTGGCCCATTCTTTTTTTCTTTATAGTAATTTAATTTTTTTTTTTTTTTTTTTGAGGTGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCAGCCACAACGCCTGGCTAATTTCTTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATCATCTCAATCTCCTGACATCGTGATCCACCCGCCTCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_520:HG4_PB_pbsv_676:HG4_10X_allpass_92:HG4_Ill_Krunchall_815:HG4_PB_assemblyticsfalcon_893:HG2_10X_allpass_88:HG2_PB_pbsv_663:HG2_Ill_tnscope_62:HG2_Ill_MetaSV_175:HG4_PB_SVrefine2Falcon1Dovetail_418:HG4_Ill_manta_149:HG4_Ill_MetaSV_186:HG4_Ill_GATKHCSBGrefine_431:HG2_PB_HySA_1256:HG2_Ill_manta_157:HG2_Ill_SpiralSDKrefine_558:HG2_Ill_GATKHCSBGrefine_383:HG2_PB_SVrefine2PBcRplusDovetail_452:HG2_PB_SVrefine2PB10Xhap12_557:HG2_Ill_SVrefine2DISCOVARplusDovetail_514;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_383:HG2_Ill_SpiralSDKrefine_558:HG2_Ill_manta_157:HG2_PB_HySA_1256:HG4_Ill_GATKHCSBGrefine_431:HG4_Ill_MetaSV_186:HG4_Ill_manta_149:HG4_PB_SVrefine2Falcon1Dovetail_418;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0435233;ClusterMaxSizeDiff=0.0435233;ClusterMaxEditDist=0.0756477;PBcalls=7;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-982;DistBack=22183;DistForward=-948;DistMin=-948;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=252;REFWIDENED=1:92482955-92484188;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=129.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:33:1:0:27:0|1:86:0:0:31:0/1:49:22:0/1:83:34:.:.:.
chr1	92681353	HG2_Ill_manta_158	CTCCAAGCAAGATTAAAAGGTTGGGTTTTGAGGAAGAACCAATAAGGATGCTG	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_712:HG2_PB_PB10Xdip_2855:HG2_PB_PB10Xdip_2856:HG4_PB_HySA_946:HG4_PB_pbsv_677:HG4_Ill_svaba_739:HG4_Ill_scalpel_540:HG4_Ill_manta_150:HG4_Ill_Krunchall_816:HG4_Ill_GATKHC_948:HG4_Ill_GATKHCSBGrefine_432:HG4_Ill_250bpfermikitraw_778:HG4_Ill_150bpfermikitraw_743:HG4_CG_vcfBeta_412:HG4_10X_allpass_93:HG2_PB_pbsv_665:HG2_Ill_svaba_737:HG2_Ill_manta_158:HG2_Ill_breakscan11_83:HG2_Ill_SpiralSDKrefine_559:HG2_Ill_Krunchall_782:HG2_Ill_GATKHC_956:HG2_Ill_GATKHCSBGrefine_385:HG2_Ill_250bpfermikitraw_787;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_712:HG4_PB_pbsv_677:HG4_Ill_svaba_739:HG4_Ill_scalpel_540:HG4_Ill_manta_150:HG4_Ill_Krunchall_816:HG4_Ill_GATKHC_948:HG4_Ill_GATKHCSBGrefine_432:HG4_Ill_250bpfermikitraw_778:HG4_Ill_150bpfermikitraw_743:HG4_CG_vcfBeta_412:HG4_10X_allpass_93:HG2_PB_pbsv_665:HG2_Ill_svaba_737:HG2_Ill_manta_158:HG2_Ill_breakscan11_83:HG2_Ill_SpiralSDKrefine_559:HG2_Ill_Krunchall_782:HG2_Ill_GATKHC_956:HG2_Ill_GATKHCSBGrefine_385:HG2_Ill_250bpfermikitraw_787;NumExactMatchSVs=21;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.125;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=1;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=1;HG2count=12;HG3count=0;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-52;DistBack=2283;DistForward=43858;DistMin=2283;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:92681352-92681406;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:22:./.:6:17:15:0:0|1:21:1:0:19:0/1:29:22:./.:.:.:.:.:.
chr1	94943232	HG2_Ill_Krunchall_796	GCATTAGTTGAGTTGTCTCTGTGTGTAAAGAGCAGTACATTAATGTGTTATTTTGGTTCTAGAGA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_689:HG4_Ill_GATKHC_964:HG4_Ill_GATKHCSBGrefine_437:HG3_Ill_GATKHC_1010:HG3_Ill_GATKHCSBGrefine_395:HG3_CG_vcfBeta_358:HG2_Ill_GATKHC_970:HG2_Ill_GATKHCSBGrefine_390:HG2_CG_vcfBeta_380:HG2_Ill_SpiralSDKrefine_568:HG2_PB_HySA_1277:HG4_Ill_manta_153:HG4_Ill_Cortex_126:HG3_Ill_manta_126:HG3_Ill_Cortex_135:HG2_PB_PB10Xdip_2872:HG2_PB_PB10Xdip_2871:HG2_Ill_manta_163:HG2_Ill_Cortex_243:HG4_Ill_svaba_750:HG3_Ill_svaba_772:HG2_Ill_svaba_749:HG4_Ill_Spiral_51:HG3_Ill_Spiral_633:HG2_Ill_Spiral_34:HG4_10X_allpass_95:HG3_10X_allpass_114:HG2_PB_pbsv_674:HG3_PB_HySA_975:HG4_PB_pbsv_685:HG4_Ill_Krunchall_830:HG4_Ill_250bpfermikitraw_792:HG4_Ill_150bpfermikitraw_755:HG3_PB_assemblyticsfalcon_917:HG3_Ill_scalpel_629:HG3_Ill_Krunchall_818:HG3_Ill_250bpfermikitraw_780:HG3_Ill_150bpfermikitraw_739:HG2_PB_assemblyticsPBcR_954:HG2_Ill_Krunchall_796:HG2_Ill_250bpfermikitraw_799:HG2_Ill_150bpfermikitraw_724:HG4_PB_assemblyticsfalcon_909;NumClusterSVs=43;ExactMatchIDs=HG2_Ill_150bpfermikitraw_724:HG2_Ill_250bpfermikitraw_799:HG2_Ill_Krunchall_796:HG2_PB_assemblyticsPBcR_954:HG3_Ill_150bpfermikitraw_739:HG3_Ill_250bpfermikitraw_780:HG3_Ill_Krunchall_818:HG3_Ill_scalpel_629:HG3_PB_assemblyticsfalcon_917:HG4_Ill_150bpfermikitraw_755:HG4_Ill_250bpfermikitraw_792:HG4_Ill_Krunchall_830;NumExactMatchSVs=12;ClusterMaxShiftDist=0.385093;ClusterMaxSizeDiff=0.385093;ClusterMaxEditDist=0.385093;PBcalls=10;Illcalls=29;TenXcalls=2;CGcalls=2;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=15;HG4count=12;NumTechs=4;NumTechsExact=2;SVLEN=-64;DistBack=66095;DistForward=104612;DistMin=66095;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:94943231-94943298;PctSeqSimilarity=0.8387;PctSizeSimilarity=0.7619;PctRecOverlap=0.7529;SizeDiff=-20;StartDistance=-1;EndDistance=-21;GTMatch=0;TruScore=78;MatchId=131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:33:0|1:26:7:3:26:./.:34:0:6:5:0/1:28:12:./.:.:.:.:.:.
chr1	95690510	HG2_PB_SVrefine2PB10Xhap12_563	AAAATAAATATAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAATAAAT	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_803:HG3_PB_pbsv_691:HG4_PB_assemblyticsfalcon_913:HG2_PB_assemblyticsfalcon_968:HG2_PB_assemblyticsPBcR_960:HG3_Ill_Krunchall_826:HG2_Ill_Krunchall_804:HG3_PB_assemblyticsfalcon_920:HG4_Ill_Spiral_52:HG2_Ill_Spiral_35:HG2_PB_HySA_1282:HG4_PB_SVrefine2PBcRDovetail_392:HG4_PB_SVrefine2Falcon1Dovetail_426:HG4_Ill_manta_154:HG4_Ill_SVrefine2DISCOVARDovetail_475:HG4_Ill_GATKHCSBGrefine_439:HG4_10X_allpass_96:HG3_PB_SVrefine2PBcRDovetail_396:HG3_Ill_scalpel_632:HG3_Ill_manta_127:HG3_Ill_MetaSV_160:HG3_Ill_GATKHCSBGrefine_397:HG3_10X_allpass_115:HG2_PB_pbsv_676:HG2_PB_SVrefine2PBcRplusDovetail_458:HG2_PB_SVrefine2PB10Xhap12_563:HG2_PB_SVrefine2Falcon1plusDovetail_454:HG2_Ill_manta_164:HG2_Ill_SVrefine2DISCOVARplusDovetail_530:HG2_Ill_GATKHCSBGrefine_392:HG2_10X_allpass_89:HG2_10X_SVrefine210Xhap12_530:HG4_Ill_MetaSV_190:HG3_PB_HySA_982:HG3_Ill_Spiral_637:HG2_Ill_MetaSV_178:HG2_Ill_tnscope_63:HG4_PB_pbsv_686:HG2_Ill_breakscan11_84:HG3_Ill_Krunchall_825:HG3_Ill_Krunchall_824;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_530:HG2_10X_allpass_89:HG2_Ill_GATKHCSBGrefine_392:HG2_Ill_SVrefine2DISCOVARplusDovetail_530:HG2_Ill_manta_164:HG2_PB_SVrefine2Falcon1plusDovetail_454:HG2_PB_SVrefine2PB10Xhap12_563:HG2_PB_SVrefine2PBcRplusDovetail_458:HG2_PB_pbsv_676:HG3_10X_allpass_115:HG3_Ill_GATKHCSBGrefine_397:HG3_Ill_MetaSV_160:HG3_Ill_manta_127:HG3_Ill_scalpel_632:HG3_PB_SVrefine2PBcRDovetail_396:HG4_10X_allpass_96:HG4_Ill_GATKHCSBGrefine_439:HG4_Ill_SVrefine2DISCOVARDovetail_475:HG4_Ill_manta_154:HG4_PB_SVrefine2Falcon1Dovetail_426:HG4_PB_SVrefine2PBcRDovetail_392;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0864;ClusterMaxSizeDiff=0.0864;ClusterMaxEditDist=0.122186;PBcalls=15;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=94736;DistForward=24560;DistMin=24560;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:95690511-95690843;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:1/1:1:20:1:18:1/1:0:22:0:18:1/1:0:46:./.:2:13:.:.:.
chr1	96139975	HG2_PB_SVrefine2PB10Xhap12_564	CCTCTTGGCTGCTCCCTTATGGGTCCCAGGACCTAACCACAGTTGGCCAATCATAATCCATCAGGCCCAGTTTGTTCAAAATGAATTGCTCATGTTCTCATACCCAATTCCATGAGATTTATAGTTCGGTTAAGAAGGCAACACCTGGTAGGAAAAATTAAAATAATAGGAGGTTTTAATGCTATAATAATAGAACAGATCTTATGAGACACAGAACATAATTTTTTAATGTGATACCATGGACATTGATTGTCATAGTGTACAAAGGAAGGTAAGATTCTTTGAGCTGGATCACCAGGAAGGGCTTTTCAGAGAAAGTAGTATTTTGACCTTGTTCTCAAATGCCAAATAAGATTGAGATGGGCCAACTGGGGAGGAAATTTGAATTGCATAAACAAAAGGAGCACAGTGAATGCCTGAAGATGGTAGTGTGCAGGGCCTGGTTAGAGGACCCTAAGCTGGGTATGGGGAGAGTCAGGGAGAGGCCTGCAAAAGCATTTTGGGGCAGGTTGTAGGTGCCAAATAAGATAATATATGCAAAATAGCCTTGTAAACTTCAAAGCATCCTAGAAATATGAGAAACTATTATTATAATTCCAGAAACTGTGGTGGTTGCCAGTGAAATAATATTTGACTTAGGGCTTTGTTGTTTCTTTCAAAGAAAAAAAATTCTGAAGATCATTGCTTGTTCCATTGCCAGTAGCTATCTTTCTCTCTTATTGACTTCTTTTCAGCCATCTTTAGTACAAATGGTGAAACTGAAGAAAAACTTCAGTGCTTTGCTCTCTACTTCCTTTAAAGGTTTCTCATCTCTTTAAGAGTTTAGACTTCTTTTTATAACTGTGTCAGCTGCAACTCCCAGAGGTCCTGCCTTGCCTCCAGTTTTGTTTACCACTCAGCAGGAATTTGTTTACTACCTAGTAGAAGAGTCAAGAAGATAAAAGCCAATCAGGGAAGCAGAAAGACAGCATCATGCAGAAAATACCAAGAAAATAAGATTAGAAACACTAGGCCCAAGTAAAGCTGACTTTAGTGACATGGTGATCCTGGAAAGTCTGCTGAGTGCACGTGTTAAATCACTTTATTGTGTAGGTTATTAGAGACTTGTAACATCTTCTGAAACTGCTTTGTGTCTGCTGAACATGCAGCACCATTTTAAACTTTTATGTTTTTTAAAAAATACCCAAACCTTTAAATCGAATTAGTTTTCCTTTAAGTTCTCAAATATACATCTATTTTCCGAAGTTTAGGTTGTTGGACAGATTAAATGTGGGGAAATGTCTTACTTAGAGTGATGAATATTTCTTTAATAAAATATCATTCACCGTGATATACTAAGACAATAATGTTTTTCTTTAACATAGTCCTTTGATGACTGAACTTCATATTGATGAACTTGAGGTGCCAGAACATCCTAGTGCAACATCTGAATTTACAGATAAACTTATTTTCAGCTGAGCATAAGTGTACTTTATTCTCTTTCTTTGGTAATTGGTGATCTGGTTATAATGTGAGTGTGGTTATTTTTTATTAATCAGAATAGTCAATGAACCAGAAATTCTGTTTCTCAGAGTCTGAATATGCAAGGTTTTAATGCAGGATAATTTCATAGGTTAATGCTTATTATTTACAACTTAGGGTGGTGATAAAAATGGTTGAATAATTTTGCTCATGGAATCATTTAATATGTATGCTTTTATAATCTATTTTTATTCATTCGGAGCCTGTATATATGATACTTCTGATCTTGCTAATTCACATGAATATGAAGTAAGATAAATAATTTTTGAGTATTAAAAAAAGTAGATTTCATATTCATTGATTATGAACTGGTTGTTTATAGCAGAAAGCAACTATTTCTTAGCTGTTGGATATTTATTATATATAAATTATATCAAGGGATTAAAAGGGTGTGTAATTCAGAATAGTTTAAAATAGAATTTAAGATAATCTAACACCATTAAAATATATTAATGAATCATTTATTCAACAGACCTTTATTGACACCTAGAAGCTTTTTAATAACCGTGTTAGCCAGAGGTGTTTTTCAAATGTCAACATCTAGAAATTAGGTAGAGAACAATGAGCTAATTGCTACATTTTGAGAAGCAGGTAGGTAATTATCTTTCTAGAAAAGTAATGCAATATTTTTATATTGATGGAGGGAAACACCTGTATTTATTGGGAGTTCCCAATAAATGTCATTCAAGATGATGAGTCAAGAGCAGCCTGGGACAAATCGTGGGGAAGGCAGGTATGCCTTGAAAATGAGGAGGTTGTTCACACTTGGTATCTGTTCTCGGACTCTTTTATAAGCCATTGCTGCACTTCAAAACCTGACAGCTCCTGGGCAAACTGTGTGGATATTTCAAAGATTCCAGGTAGAACTGGCAGAAGGGTAATTGTATCCTGTGGAG	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_64:HG3_10X_allpass_116:HG2_10X_allpass_90:HG2_PB_assemblyticsfalcon_971:HG4_PB_SVrefine2Falcon1Dovetail_428:HG3_PB_pbsv_692:HG3_PB_SVrefine2PBcRDovetail_398:HG3_PB_SVrefine2Falcon1Dovetail_400:HG2_PB_pbsv_677:HG2_PB_SVrefine2PBcRplusDovetail_459:HG2_PB_SVrefine2PB10Xhap12_564:HG2_PB_SVrefine2Falcon1plusDovetail_455:HG2_Ill_breakscan11_85:HG2_Ill_SpiralSDKrefine_575:HG2_Ill_SVrefine2DISCOVARplusDovetail_531:HG2_Ill_MetaSV_179:HG2_10X_SVrefine210Xhap12_531:HG3_Ill_MetaSV_161;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_531:HG2_Ill_MetaSV_179:HG2_Ill_SVrefine2DISCOVARplusDovetail_531:HG2_Ill_SpiralSDKrefine_575:HG2_Ill_breakscan11_85:HG2_PB_SVrefine2Falcon1plusDovetail_455:HG2_PB_SVrefine2PB10Xhap12_564:HG2_PB_SVrefine2PBcRplusDovetail_459:HG2_PB_pbsv_677:HG3_PB_SVrefine2Falcon1Dovetail_400:HG3_PB_SVrefine2PBcRDovetail_398:HG3_PB_pbsv_692:HG4_PB_SVrefine2Falcon1Dovetail_428;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00289915;ClusterMaxSizeDiff=0.00289915;ClusterMaxEditDist=0.00289915;PBcalls=9;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-2416;DistBack=34336;DistForward=-2415;DistMin=-2415;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:96139976-96142393;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:56:./.:18:2:17:21:./.:75:0:1:16:0/1:61:14:0/1:171:79:2598:.:.
chr1	96483080	HG4_Ill_150bpfermikitraw_766	ATATATGTATGTATATATACACATACATGTATATGTATGTATATATACACATACATGTATATGTATGTATATATACACATACATG	A	20	PASS	ClusterIDs=HG3_PB_HySA_986:HG4_PB_assemblyticsfalcon_917:HG4_PB_SVrefine2Falcon1Dovetail_429:HG4_Ill_Krunchall_839:HG3_PB_pbsv_693:HG2_PB_pbsv_678:HG2_PB_HySA_1285:HG4_PB_pbsv_687:HG4_Ill_Krunchall_838:HG4_Ill_GATKHC_975:HG4_Ill_GATKHCSBGrefine_441:HG4_Ill_250bpfermikitraw_801:HG4_Ill_150bpfermikitraw_766:HG3_Ill_Krunchall_832:HG3_Ill_GATKHC_1022:HG3_Ill_GATKHCSBGrefine_399:HG3_Ill_250bpfermikitraw_790:HG3_Ill_150bpfermikitraw_749:HG2_Ill_manta_165:HG2_Ill_SpiralSDKrefine_576:HG2_Ill_GATKHC_986:HG2_Ill_GATKHCSBGrefine_395:HG2_Ill_250bpfermikitraw_811;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_811:HG2_Ill_GATKHCSBGrefine_395:HG2_Ill_GATKHC_986:HG2_Ill_SpiralSDKrefine_576:HG2_Ill_manta_165:HG3_Ill_150bpfermikitraw_749:HG3_Ill_250bpfermikitraw_790:HG3_Ill_GATKHCSBGrefine_399:HG3_Ill_GATKHC_1022:HG3_Ill_Krunchall_832:HG4_Ill_150bpfermikitraw_766:HG4_Ill_250bpfermikitraw_801:HG4_Ill_GATKHCSBGrefine_441:HG4_Ill_GATKHC_975:HG4_Ill_Krunchall_838;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0818713;ClusterMaxSizeDiff=0.0818713;ClusterMaxEditDist=0.116959;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-84;DistBack=1711;DistForward=-43;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=127;REFWIDENED=1:96483053-96483263;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=134.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:63:1/1:2:42:1:18:./.:1:23:2:23:1/1:0:45:./.:.:.:.:.:.
chr1	99976027	HG3_Ill_Krunchall_847	TGCTTTTCTGGGAGAGGGGCAAGTACCCCTCAACCCCTTCTCCTTCACCCTTCGTGGCAAGACCC	T	20	PASS	ClusterIDs=HG2_Ill_manta_169:HG3_PB_assemblyticsfalcon_941:HG2_PB_assemblyticsfalcon_989:HG4_PB_assemblyticsfalcon_934:HG3_PB_HySA_1010:HG2_PB_HySA_1304:HG2_PB_pbsv_687:HG4_PB_pbsv_697:HG3_PB_pbsv_703:HG4_Ill_GATKHC_997:HG4_Ill_GATKHCSBGrefine_451:HG3_Ill_GATKHC_1042:HG3_Ill_GATKHCSBGrefine_410:HG2_Ill_GATKHC_1007:HG2_Ill_GATKHCSBGrefine_403:HG4_PB_HySA_992:HG4_Ill_svaba_769:HG4_Ill_scalpel_567:HG4_Ill_Krunchall_855:HG4_Ill_250bpfermikitraw_821:HG4_Ill_150bpfermikitraw_783:HG3_Ill_svaba_789:HG3_Ill_scalpel_649:HG3_Ill_Krunchall_847:HG3_Ill_250bpfermikitraw_805:HG3_Ill_150bpfermikitraw_764:HG2_Ill_svaba_765:HG2_Ill_scalpel_606:HG2_Ill_Krunchall_821:HG2_Ill_250bpfermikitraw_828:HG2_Ill_150bpfermikitraw_742:HG4_Ill_manta_157;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_742:HG2_Ill_250bpfermikitraw_828:HG2_Ill_Krunchall_821:HG2_Ill_scalpel_606:HG2_Ill_svaba_765:HG3_Ill_150bpfermikitraw_764:HG3_Ill_250bpfermikitraw_805:HG3_Ill_Krunchall_847:HG3_Ill_scalpel_649:HG3_Ill_svaba_789:HG4_Ill_150bpfermikitraw_783:HG4_Ill_250bpfermikitraw_821:HG4_Ill_Krunchall_855:HG4_Ill_scalpel_567:HG4_Ill_svaba_769;NumExactMatchSVs=15;ClusterMaxShiftDist=0.146341;ClusterMaxSizeDiff=0.146341;ClusterMaxEditDist=0.262295;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=-64;DistBack=-37;DistForward=-25;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=92;REFWIDENED=1:99976028-99976183;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:35:1/1:5:23:0:14:1/1:0:11:0:11:1/1:0:26:./.:.:.:.:.:.
chr1	100390692	HG2_PB_assemblyticsfalcon_998	CTGGGCTCAAACTACCCTCCCACCTCAGCATCCCAAGTAGCTAGGATGACAGGCGTACAACTACTGCACCCACCTAACTTTTGCAATTCTTTTTTTGTAGAGATGGGGGTCCACACTGTGTTGTCTAGGCTTGGTCTCAACCTCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_542:HG4_Ill_SVrefine2DISCOVARDovetail_492:HG2_PB_assemblyticsfalcon_998:HG2_PB_assemblyticsPBcR_990:HG2_PB_SVrefine2PBcRplusDovetail_465:HG2_PB_SVrefine2PB10Xhap12_574:HG2_PB_SVrefine2Falcon1plusDovetail_462:HG2_Ill_SVrefine2DISCOVARplusDovetail_545:HG2_10X_SVrefine210Xhap12_543:HG4_PB_pbsv_699:HG2_PB_pbsv_690:HG4_PB_HySA_997:HG4_Ill_GATKHCSBGrefine_455:HG4_10X_allpass_97:HG2_10X_allpass_91;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_543:HG2_Ill_SVrefine2DISCOVARplusDovetail_545:HG2_PB_SVrefine2Falcon1plusDovetail_462:HG2_PB_SVrefine2PB10Xhap12_574:HG2_PB_SVrefine2PBcRplusDovetail_465:HG2_PB_assemblyticsPBcR_990:HG2_PB_assemblyticsfalcon_998:HG4_Ill_SVrefine2DISCOVARDovetail_492;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0138889;ClusterMaxSizeDiff=0.0138889;ClusterMaxEditDist=0.0208333;PBcalls=8;Illcalls=3;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-144;DistBack=67290;DistForward=69823;DistMin=67290;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=188;REFWIDENED=1:100390540-100390871;PctSeqSimilarity=0.9832;PctSizeSimilarity=0.9931;PctRecOverlap=0.5931;SizeDiff=1;StartDistance=58;EndDistance=59;GTMatch=0;TruScore=85;MatchId=136.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:30:0|1:22:0:2:29:./.:2:4:28:3:0/1:25:10:./.:.:.:.:.:.
chr1	101388551	HG2_PB_SVrefine2Falcon1plusDovetail_465	TTAGAATAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_183:HG3_10X_allpass_118:HG2_PB_SVrefine2PB10Xhap12_579:HG2_PB_assemblyticsfalcon_1008:HG2_PB_PB10Xdip_10:HG2_PB_assemblyticsPBcR_997:HG4_Ill_Krunchall_873:HG2_Ill_Krunchall_842:HG4_Ill_Spiral_53:HG3_Ill_Spiral_665:HG2_Ill_Spiral_37:HG4_PB_pbsv_702:HG2_PB_HySA_1320:HG4_Ill_scalpel_578:HG4_Ill_GATKHCSBGrefine_458:HG4_10X_allpass_98:HG3_PB_pbsv_710:HG3_Ill_scalpel_662:HG3_Ill_MetaSV_167:HG3_Ill_GATKHCSBGrefine_419:HG2_PB_pbsv_695:HG2_PB_SVrefine2PBcRplusDovetail_467:HG2_PB_SVrefine2PB10Xhap12_578:HG2_PB_SVrefine2Falcon1plusDovetail_465:HG2_Ill_scalpel_619:HG2_Ill_SVrefine2DISCOVARplusDovetail_548:HG2_Ill_MetaSV_184:HG2_Ill_GATKHCSBGrefine_412:HG2_10X_allpass_93:HG2_10X_SVrefine210Xhap12_547:HG4_Ill_MetaSV_194:HG2_Ill_tnscope_65;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_547:HG2_10X_allpass_93:HG2_Ill_GATKHCSBGrefine_412:HG2_Ill_MetaSV_184:HG2_Ill_SVrefine2DISCOVARplusDovetail_548:HG2_Ill_scalpel_619:HG2_PB_SVrefine2Falcon1plusDovetail_465:HG2_PB_SVrefine2PB10Xhap12_578:HG2_PB_SVrefine2PBcRplusDovetail_467:HG2_PB_pbsv_695:HG3_Ill_GATKHCSBGrefine_419:HG3_Ill_MetaSV_167:HG3_Ill_scalpel_662:HG3_PB_pbsv_710:HG4_10X_allpass_98:HG4_Ill_GATKHCSBGrefine_458:HG4_Ill_scalpel_578;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0730159;ClusterMaxSizeDiff=0.0730159;ClusterMaxEditDist=0.0730159;PBcalls=11;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=7814;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=1:101388552-101388883;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:47:0|1:22:0:2:46:1|0:0:35:44:0:0/1:29:21:0/1:32:12:.:.:.
chr1	101622764	HG2_Ill_SpiralSDKrefine_599	TAAAGGTTTTGCTTCTTCAAAACATCATAAAATTAAGTTTAAAAAGTAAGGGACAAACTGTAAAAAACACTTGTGAGATATGAATGATAAGAAAGATGGGAAAGGTTGGCATCCTGGATATATTAAGAGCTCTTAACAATAAGAGAAAAGTATTCTAATATAAAAATGAACTCAGCAATTTATCAAAGAATAAACATGACCTCCAAAATGTTAAAACCTGACCAAAGATAAAAAAATACTGGAAATAAAAATACAATCTTCATTATCATATTAGTGAAGATAGTCACAGAATACAGTACAGATATATGTACAAAGTATTCATCTTGGAACTGTTAATAACAATGAAAATTGAGAAAATAATTCTTTCAACG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_548:HG3_PB_assemblyticsfalcon_958:HG2_PB_assemblyticsPBcR_998:HG4_PB_pbsv_703:HG2_PB_SVrefine2PB10Xhap12_581:HG4_Ill_MetaSV_195:HG2_Ill_tnscope_66:HG2_Ill_MetaSV_185:HG4_PB_assemblyticsfalcon_948:HG4_Ill_manta_158:HG4_Ill_GATKHCSBGrefine_459:HG4_Ill_Cortex_130:HG4_10X_allpass_99:HG2_PB_pbsv_696:HG2_PB_SVrefine2PBcRplusDovetail_468:HG2_PB_SVrefine2PB10Xhap12_580:HG2_PB_SVrefine2Falcon1plusDovetail_466:HG2_Ill_breakscan11_86:HG2_Ill_SpiralSDKrefine_599:HG2_Ill_GATKHCSBGrefine_413:HG2_Ill_Cortex_256:HG2_10X_allpass_94;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_548:HG4_PB_assemblyticsfalcon_948:HG4_Ill_manta_158:HG4_Ill_GATKHCSBGrefine_459:HG4_Ill_Cortex_130:HG4_10X_allpass_99:HG2_PB_pbsv_696:HG2_PB_SVrefine2PBcRplusDovetail_468:HG2_PB_SVrefine2PB10Xhap12_580:HG2_PB_SVrefine2Falcon1plusDovetail_466:HG2_Ill_breakscan11_86:HG2_Ill_SpiralSDKrefine_599:HG2_Ill_GATKHCSBGrefine_413:HG2_Ill_Cortex_256:HG2_10X_allpass_94;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0407609;ClusterMaxSizeDiff=0.0407609;ClusterMaxEditDist=0.0407609;PBcalls=9;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-370;DistBack=5025;DistForward=16883;DistMin=5025;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=1:101622765-101623142;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:42:0|1:51:1:8:39:1|0:0:29:53:0:0/1:76:30:0/1:34:6:.:.:.
chr1	101724129	HG4_10X_allpass_100	CTGTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_700:HG3_PB_assemblyticsfalcon_963:HG4_Ill_GATKHC_1021:HG4_Ill_GATKHCSBGrefine_462:HG3_Ill_GATKHC_1069:HG3_Ill_GATKHCSBGrefine_421:HG2_Ill_GATKHC_1036:HG2_Ill_GATKHCSBGrefine_416:HG4_Ill_manta_160:HG4_CG_vcfBeta_434:HG3_Ill_manta_132:HG3_CG_vcfBeta_372:HG2_PB_PB10Xdip_13:HG2_Ill_manta_172:HG2_Ill_SpiralSDKrefine_604:HG4_Ill_Spiral_54:HG3_Ill_Spiral_670:HG2_Ill_Spiral_38:HG3_PB_pbsv_714:HG3_PB_HySA_1029:HG2_PB_HySA_1332:HG4_Ill_svaba_787:HG4_Ill_Krunchall_881:HG4_Ill_250bpfermikitraw_845:HG4_Ill_150bpfermikitraw_804:HG4_10X_allpass_100:HG3_Ill_svaba_817:HG3_Ill_Krunchall_872:HG3_Ill_250bpfermikitraw_832:HG3_Ill_150bpfermikitraw_792:HG3_10X_allpass_119:HG2_Ill_svaba_792:HG2_Ill_Krunchall_850:HG2_Ill_250bpfermikitraw_856:HG2_Ill_150bpfermikitraw_767:HG2_10X_allpass_95:HG2_PB_assemblyticsfalcon_1013:HG4_PB_assemblyticsfalcon_953:HG4_PB_pbsv_706:HG2_PB_assemblyticsPBcR_1002:HG4_PB_HySA_1012;NumClusterSVs=41;ExactMatchIDs=HG2_10X_allpass_95:HG2_Ill_150bpfermikitraw_767:HG2_Ill_250bpfermikitraw_856:HG2_Ill_Krunchall_850:HG2_Ill_svaba_792:HG3_10X_allpass_119:HG3_Ill_150bpfermikitraw_792:HG3_Ill_250bpfermikitraw_832:HG3_Ill_Krunchall_872:HG3_Ill_svaba_817:HG4_10X_allpass_100:HG4_Ill_150bpfermikitraw_804:HG4_Ill_250bpfermikitraw_845:HG4_Ill_Krunchall_881:HG4_Ill_svaba_787;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0662252;ClusterMaxSizeDiff=0.0662252;ClusterMaxEditDist=0.107383;PBcalls=11;Illcalls=25;TenXcalls=3;CGcalls=2;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=13;NumTechs=4;NumTechsExact=2;SVLEN=-76;DistBack=2511;DistForward=31642;DistMin=2511;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:101724128-101724207;PctSeqSimilarity=0.9935;PctSizeSimilarity=0.9868;PctRecOverlap=0.987;SizeDiff=1;StartDistance=0;EndDistance=1;GTMatch=0;TruScore=98;MatchId=139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:./.:0:2:0:4:1/1:0:17:0:13:1/1:0:50:./.:.:.:.:.:.
chr1	102123410	HG2_Ill_SVrefine2DISCOVARplusDovetail_553	ATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_720:HG3_PB_HySA_1037:HG2_PB_HySA_1337:HG4_PB_HySA_1027:HG4_PB_assemblyticsfalcon_961:HG2_PB_assemblyticsfalcon_1020:HG3_PB_assemblyticsfalcon_971:HG2_PB_pbsv_703:HG4_PB_pbsv_711:HG4_Ill_SVrefine2DISCOVARDovetail_498:HG4_Ill_GATKHCSBGrefine_468:HG4_Ill_250bpfermikitraw_850:HG2_Ill_SVrefine2DISCOVARplusDovetail_553:HG2_Ill_250bpfermikitraw_861:HG2_Ill_150bpfermikitraw_773:HG2_PB_SVrefine2PBcRplusDovetail_472:HG3_Ill_250bpfermikitraw_840:HG2_PB_SVrefine2PB10Xhap12_585:HG3_PB_SVrefine2PBcRDovetail_409;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_773:HG2_Ill_250bpfermikitraw_861:HG2_Ill_SVrefine2DISCOVARplusDovetail_553:HG4_Ill_250bpfermikitraw_850;NumExactMatchSVs=4;ClusterMaxShiftDist=0.361111;ClusterMaxSizeDiff=0.361111;ClusterMaxEditDist=0.361111;PBcalls=12;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-81;DistBack=100396;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=101;REFWIDENED=1:102123414-102123592;PctSeqSimilarity=0.9814;PctSizeSimilarity=0.963;PctRecOverlap=0.9634;SizeDiff=3;StartDistance=0;EndDistance=3;GTMatch=0;TruScore=96;MatchId=140.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:63:./.:0:7:1:2:./.:0:4:3:1:0/1:6:18:./.:.:.:.:.:.
chr1	103047678	HG2_Ill_manta_175	TAAAGTTCTTGTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_677:HG4_Ill_Krunchall_896:HG3_Ill_Krunchall_883:HG2_Ill_Krunchall_862:HG4_PB_assemblyticsfalcon_967:HG3_PB_assemblyticsfalcon_976:HG2_PB_assemblyticsPBcR_1012:HG2_PB_assemblyticsfalcon_1026:HG2_PB_pbsv_708:HG4_PB_pbsv_716:HG4_PB_HySA_1033:HG3_PB_HySA_1045:HG2_Ill_tnscope_67:HG2_Ill_MetaSV_189:HG4_PB_SVrefine2Falcon1Dovetail_445:HG4_Ill_svaba_794:HG4_Ill_scalpel_593:HG4_Ill_manta_164:HG4_Ill_SVrefine2DISCOVARDovetail_499:HG4_Ill_MetaSV_198:HG4_Ill_GATKHCSBGrefine_472:HG4_10X_allpass_101:HG3_PB_pbsv_724:HG3_PB_SVrefine2PBcRDovetail_410:HG3_Ill_svaba_827:HG3_Ill_scalpel_678:HG3_Ill_manta_136:HG3_Ill_MetaSV_170:HG3_Ill_GATKHCSBGrefine_431:HG3_10X_allpass_120:HG2_PB_SVrefine2PBcRplusDovetail_475:HG2_PB_SVrefine2PB10Xhap12_589:HG2_PB_SVrefine2Falcon1plusDovetail_474:HG2_Ill_svaba_803:HG2_Ill_scalpel_629:HG2_Ill_manta_175:HG2_Ill_breakscan11_87:HG2_Ill_SVrefine2DISCOVARplusDovetail_555:HG2_Ill_GATKHCSBGrefine_425:HG2_10X_allpass_96:HG2_10X_SVrefine210Xhap12_551;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_551:HG2_10X_allpass_96:HG2_Ill_GATKHCSBGrefine_425:HG2_Ill_SVrefine2DISCOVARplusDovetail_555:HG2_Ill_breakscan11_87:HG2_Ill_manta_175:HG2_Ill_scalpel_629:HG2_Ill_svaba_803:HG2_PB_SVrefine2Falcon1plusDovetail_474:HG2_PB_SVrefine2PB10Xhap12_589:HG2_PB_SVrefine2PBcRplusDovetail_475:HG3_10X_allpass_120:HG3_Ill_GATKHCSBGrefine_431:HG3_Ill_MetaSV_170:HG3_Ill_manta_136:HG3_Ill_scalpel_678:HG3_Ill_svaba_827:HG3_PB_SVrefine2PBcRDovetail_410:HG3_PB_pbsv_724:HG4_10X_allpass_101:HG4_Ill_GATKHCSBGrefine_472:HG4_Ill_MetaSV_198:HG4_Ill_SVrefine2DISCOVARDovetail_499:HG4_Ill_manta_164:HG4_Ill_scalpel_593:HG4_Ill_svaba_794:HG4_PB_SVrefine2Falcon1Dovetail_445;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0832049;ClusterMaxSizeDiff=0.0832049;ClusterMaxEditDist=0.0832049;PBcalls=14;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=87802;DistForward=-314;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:103047679-103048022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:0:37:0:23:1/1:0:17:0:21:1/1:0:51:./.:1:17:.:.:.
chr1	103096065	HG2_Ill_GATKHCSBGrefine_426	ACAGTAATAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACCGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTAATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_88:HG3_PB_HySA_1047:HG4_PB_assemblyticsfalcon_968:HG3_PB_assemblyticsfalcon_977:HG2_PB_assemblyticsPBcR_1013:HG2_PB_assemblyticsfalcon_1027:HG2_Ill_Krunchall_864:HG4_Ill_Spiral_57:HG3_Ill_Spiral_679:HG2_PB_HySA_1347:HG2_Ill_Spiral_39:HG3_PB_pbsv_725:HG2_PB_pbsv_709:HG4_PB_pbsv_717:HG4_Ill_MetaSV_199:HG3_Ill_MetaSV_171:HG2_Ill_tnscope_68:HG2_Ill_MetaSV_190:HG4_PB_SVrefine2Falcon1Dovetail_446:HG4_PB_HySA_1035:HG4_Ill_scalpel_595:HG4_Ill_manta_165:HG4_Ill_SVrefine2DISCOVARDovetail_500:HG4_Ill_GATKHCSBGrefine_473:HG4_10X_allpass_102:HG3_PB_SVrefine2PBcRDovetail_411:HG3_Ill_scalpel_680:HG3_Ill_manta_137:HG3_Ill_GATKHCSBGrefine_432:HG3_10X_allpass_121:HG2_PB_SVrefine2PBcRplusDovetail_476:HG2_PB_SVrefine2PB10Xhap12_590:HG2_PB_SVrefine2Falcon1plusDovetail_475:HG2_Ill_scalpel_630:HG2_Ill_manta_176:HG2_Ill_SpiralSDKrefine_609:HG2_Ill_SVrefine2DISCOVARplusDovetail_556:HG2_Ill_GATKHCSBGrefine_426:HG2_10X_allpass_97:HG2_10X_SVrefine210Xhap12_552;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_552:HG2_10X_allpass_97:HG2_Ill_GATKHCSBGrefine_426:HG2_Ill_SVrefine2DISCOVARplusDovetail_556:HG2_Ill_SpiralSDKrefine_609:HG2_Ill_manta_176:HG2_Ill_scalpel_630:HG2_PB_SVrefine2Falcon1plusDovetail_475:HG2_PB_SVrefine2PB10Xhap12_590:HG2_PB_SVrefine2PBcRplusDovetail_476:HG3_10X_allpass_121:HG3_Ill_GATKHCSBGrefine_432:HG3_Ill_manta_137:HG3_Ill_scalpel_680:HG3_PB_SVrefine2PBcRDovetail_411:HG4_10X_allpass_102:HG4_Ill_GATKHCSBGrefine_473:HG4_Ill_SVrefine2DISCOVARDovetail_500:HG4_Ill_manta_165:HG4_Ill_scalpel_595:HG4_PB_HySA_1035:HG4_PB_SVrefine2Falcon1Dovetail_446;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0956938;ClusterMaxSizeDiff=0.0956938;ClusterMaxEditDist=0.0956938;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=1152;DistForward=10710;DistMin=1152;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:103096066-103096399;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:1:37:1:25:1/1:0:26:0:15:1/1:0:48:./.:2:9:.:.:.
chr1	103110989	HG4_Ill_svaba_796	ACCAGGATGCCAACCAGACAGAAGAAAAGAACCCAAACTCCTAGAGAAGATGAAGTGGAGGGGAGGAC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_553:HG4_Ill_Spiral_58:HG3_PB_HySA_1048:HG3_Ill_Spiral_680:HG2_PB_HySA_1348:HG2_PB_pbsv_710:HG4_PB_pbsv_718:HG3_PB_pbsv_726:HG4_PB_HySA_1036:HG4_PB_SVrefine2Falcon1Dovetail_447:HG4_Ill_svaba_796:HG4_Ill_SVrefine2DISCOVARDovetail_501:HG4_Ill_Krunchall_899:HG4_Ill_GATKHCSBGrefine_474:HG4_Ill_250bpfermikitraw_859:HG4_Ill_150bpfermikitraw_816:HG3_PB_SVrefine2PBcRDovetail_412:HG3_Ill_svaba_829:HG3_Ill_scalpel_681:HG3_Ill_Krunchall_885:HG3_Ill_GATKHCSBGrefine_433:HG3_Ill_250bpfermikitraw_848:HG3_Ill_150bpfermikitraw_803:HG2_PB_SVrefine2PBcRplusDovetail_477:HG2_PB_SVrefine2PB10Xhap12_591:HG2_PB_SVrefine2Falcon1plusDovetail_476:HG2_Ill_svaba_805:HG2_Ill_manta_177:HG2_Ill_SpiralSDKrefine_610:HG2_Ill_SVrefine2DISCOVARplusDovetail_558:HG2_Ill_GATKHCSBGrefine_427:HG2_Ill_250bpfermikitraw_870:HG2_Ill_150bpfermikitraw_780;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_553:HG4_PB_SVrefine2Falcon1Dovetail_447:HG4_Ill_svaba_796:HG4_Ill_SVrefine2DISCOVARDovetail_501:HG4_Ill_Krunchall_899:HG4_Ill_GATKHCSBGrefine_474:HG4_Ill_250bpfermikitraw_859:HG4_Ill_150bpfermikitraw_816:HG3_PB_SVrefine2PBcRDovetail_412:HG3_Ill_svaba_829:HG3_Ill_scalpel_681:HG3_Ill_Krunchall_885:HG3_Ill_GATKHCSBGrefine_433:HG3_Ill_250bpfermikitraw_848:HG3_Ill_150bpfermikitraw_803:HG2_PB_SVrefine2PBcRplusDovetail_477:HG2_PB_SVrefine2PB10Xhap12_591:HG2_PB_SVrefine2Falcon1plusDovetail_476:HG2_Ill_svaba_805:HG2_Ill_manta_177:HG2_Ill_SpiralSDKrefine_610:HG2_Ill_SVrefine2DISCOVARplusDovetail_558:HG2_Ill_GATKHCSBGrefine_427:HG2_Ill_250bpfermikitraw_870:HG2_Ill_150bpfermikitraw_780;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0444444;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.0451128;PBcalls=11;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-67;DistBack=3893;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=73;REFWIDENED=1:103110990-103111129;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:0:26:1:31:1/1:0:6:0:7:1/1:0:38:./.:.:.:.:.:.
chr1	104443199	HG2_Ill_MetaSV_193	CCACCACTACCAAATCTGGTGAATCTAAAAGGTAAATCTCTTTTGCCCTGGTTCCATTAGTGCCGCTAAATAACTGACAGGTATGGAACAAAAATAAGAATAAATGGAAATAAAACAGATGGCATCATTGCCCTCCTCATTACAAAAAAAATTAAATGAAATAAAAACAAGAAAAATAATAGTAATATACTTTTCAGTCAAAAATGTAACTGAGGTAATGAAAGTAATCTCCTAATTGTTAAAGATTTTCACCTTTTATCAGCTTAGGTTGTCACTGAAATATTTTTATGCCTAAATCTAAATTATGCAAGGGGGAGAGTACTATTTTCAGTATGCCATATTTAATTCTCTAAAATGAACTTGTTCAGTAAGGGCCTGAAGGGATGAATGATAGCCTGGCAGGTTCTCAATAAATAATGACAATTTATCAGTAAAGAGGTTTATTTTCATGAGATGAATATGTAGATACAGCTGTAACTTTAATTTCCAGATTCCCAAGACAAAGAAGCAATGACAGAAATCATAAA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_716:HG3_PB_pbsv_732:HG2_Ill_tnscope_69:HG4_Ill_Cortex_134:HG3_PB_assemblyticsfalcon_986:HG3_PB_SVrefine2Falcon1Dovetail_410:HG3_Ill_MetaSV_173:HG3_Ill_GATKHCSBGrefine_439:HG3_Ill_Cortex_145:HG3_10X_allpass_123:HG2_PB_SVrefine2PBcRplusDovetail_481:HG2_PB_SVrefine2PB10Xhap12_596:HG2_Ill_manta_180:HG2_Ill_breakscan11_89:HG2_Ill_SpiralSDKrefine_618:HG2_Ill_MetaSV_193:HG2_Ill_GATKHCSBGrefine_434:HG2_Ill_Cortex_271:HG2_10X_allpass_98:HG2_10X_SVrefine210Xhap12_555:HG3_Ill_Spiral_692:HG2_Ill_Spiral_40:HG3_Ill_Krunchall_893:HG2_Ill_Krunchall_872;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_555:HG2_10X_allpass_98:HG2_Ill_Cortex_271:HG2_Ill_GATKHCSBGrefine_434:HG2_Ill_MetaSV_193:HG2_Ill_SpiralSDKrefine_618:HG2_Ill_breakscan11_89:HG2_Ill_manta_180:HG2_PB_SVrefine2PB10Xhap12_596:HG2_PB_SVrefine2PBcRplusDovetail_481:HG3_10X_allpass_123:HG3_Ill_Cortex_145:HG3_Ill_GATKHCSBGrefine_439:HG3_Ill_MetaSV_173:HG3_PB_SVrefine2Falcon1Dovetail_410:HG3_PB_assemblyticsfalcon_986:HG4_Ill_Cortex_134;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00379507;ClusterMaxSizeDiff=0.00379507;ClusterMaxEditDist=0.00759734;PBcalls=6;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-526;DistBack=-1;DistForward=-479;DistMin=-479;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:104443200-104443725;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:0|1:32:0:3:26:0|1:65:0:0:11:0/1:55:22:0/1:31:11:.:.:.
chr1	104451498	HG2_10X_allpass_99	ACTCTGAAGTTCCACTTTCTTAGATCAGAGAGCATTTGATCAGACATTTGGCCTTCTTTTGAAAGAAATAAAGAAGGGAGCCAGGTGAAGGTGTGGACAAATGGATTCTAAACTCAAGCAACAGGGACTTCCTTAGACAAGTGGTTTCCAAACTT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_41:HG2_PB_SVrefine2PB10Xhap12_598:HG2_PB_PB10Xdip_38:HG2_PB_PB10Xdip_39:HG2_Ill_Krunchall_873:HG2_PB_pbsv_717:HG3_PB_pbsv_733:HG3_PB_HySA_1054:HG3_PB_assemblyticsfalcon_987:HG3_PB_SVrefine2Falcon1Dovetail_411:HG3_Ill_svaba_840:HG3_Ill_scalpel_689:HG3_Ill_manta_139:HG3_Ill_MetaSV_174:HG3_Ill_GATKHCSBGrefine_440:HG3_Ill_Cortex_146:HG3_10X_allpass_124:HG2_PB_SVrefine2PBcRplusDovetail_482:HG2_PB_SVrefine2PB10Xhap12_597:HG2_PB_SVrefine2Falcon1plusDovetail_481:HG2_Ill_svaba_816:HG2_Ill_scalpel_634:HG2_Ill_breakscan11_90:HG2_Ill_SpiralSDKrefine_619:HG2_Ill_SVrefine2DISCOVARplusDovetail_563:HG2_Ill_MetaSV_194:HG2_Ill_GATKHCSBGrefine_435:HG2_Ill_Cortex_272:HG2_10X_allpass_99:HG2_10X_SVrefine210Xhap12_556;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_556:HG2_10X_allpass_99:HG2_Ill_Cortex_272:HG2_Ill_GATKHCSBGrefine_435:HG2_Ill_MetaSV_194:HG2_Ill_SVrefine2DISCOVARplusDovetail_563:HG2_Ill_SpiralSDKrefine_619:HG2_Ill_breakscan11_90:HG2_Ill_scalpel_634:HG2_Ill_svaba_816:HG2_PB_PB10Xdip_39:HG3_PB_assemblyticsfalcon_987:HG3_PB_SVrefine2Falcon1Dovetail_411:HG3_Ill_svaba_840:HG3_Ill_scalpel_689:HG3_Ill_manta_139:HG3_Ill_MetaSV_174:HG3_Ill_GATKHCSBGrefine_440:HG3_Ill_Cortex_146:HG3_10X_allpass_124:HG2_PB_SVrefine2PBcRplusDovetail_482:HG2_PB_SVrefine2PB10Xhap12_597:HG2_PB_SVrefine2Falcon1plusDovetail_481;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0129032;ClusterMaxSizeDiff=0.0129032;ClusterMaxEditDist=0.012987;PBcalls=11;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-154;DistBack=7769;DistForward=-148;DistMin=-148;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=1:104451499-104451658;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=145.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:./.:8:13:18:12:0|1:47:0:0:34:0/1:40:29:./.:.:.:.:.:.
chr1	104719847	HG3_10X_allpass_125	CAAGAAATAACCATAAAAGGACGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGAAAGA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_559:HG2_PB_assemblyticsfalcon_1041:HG3_Ill_Krunchall_899:HG2_Ill_Krunchall_878:HG3_PB_HySA_1056:HG2_PB_HySA_1366:HG3_PB_pbsv_735:HG2_PB_SVrefine2PB10Xhap12_600:HG2_Ill_tnscope_70:HG3_PB_assemblyticsfalcon_989:HG3_PB_SVrefine2PBcRDovetail_419:HG3_PB_SVrefine2Falcon1Dovetail_413:HG3_Ill_MetaSV_175:HG3_10X_allpass_125:HG2_PB_pbsv_719:HG2_PB_SVrefine2Falcon1plusDovetail_483:HG2_Ill_scalpel_638:HG2_Ill_manta_181:HG2_Ill_MetaSV_195:HG2_Ill_GATKHCSBGrefine_436:HG2_10X_allpass_100;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_559:HG3_PB_assemblyticsfalcon_989:HG3_PB_SVrefine2PBcRDovetail_419:HG3_PB_SVrefine2Falcon1Dovetail_413:HG3_Ill_MetaSV_175:HG3_10X_allpass_125:HG2_PB_pbsv_719:HG2_PB_SVrefine2Falcon1plusDovetail_483:HG2_Ill_scalpel_638:HG2_Ill_manta_181:HG2_Ill_MetaSV_195:HG2_Ill_GATKHCSBGrefine_436:HG2_10X_allpass_100;NumExactMatchSVs=13;ClusterMaxShiftDist=0.106452;ClusterMaxSizeDiff=0.106452;ClusterMaxEditDist=0.106452;PBcalls=10;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=4199;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=1:104719848-104720181;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:22:0|1:47:0:1:23:0|1:46:0:0:17:0/1:30:17:0/1:22:5:.:.:.
chr1	105218645	HG4_Ill_Cortex_135	ATGGTAAGTTTTAAATGAGTGGAAATTGCTGTTCCACTTATTTAAACCACAAGAACACTTGACTTCTTATCACTCAAAAAAGGAAAAATAGAAAATGCCACTTGATTTTAATAGAAGGGTATTGAACTTTTATGTACTGTCTATATACATATGGCCTAGTATTTTAGGGAAAAAAATCATATGAAAATTAGCTATTAAACTAAAAATGGTTAGTAAGATACAGGCAAATTTATTCTGTAGATTTTTTTAGTTTTCAAGCTCTTTTATTAATATTTATTCAGTATTACTTTTCTTAATTTGTTTTAAAATATAGGGAAATATATAAAAAATTATTTTCTTTTAAAATAAATTAACTGTTGTCACTTGAATAAACAATTCTCAATCAATTCTAATCCCCCATTCTTTTACATTATTTAGAAAATAAAGTTGTTTTTACTTCAACCCATGTTTTTATATTCATAAAATGTTATCTTCAAAATAAGCTTGCAATGTAAGACATGTAAAGAATGACATCATATGTACAAATAAATGCTAATTATTTGCTAATATCATTAACAAAATTCACAAATTTTGACCATGCGCATTCACCAGCCAACTGCCTTAGAGGCAAGCTCTGCCCCTCTTCTGTGTTTCAACAAAAAGTCCCAGTGCAAAGCACCATATTATGAATCTTAGCTAGTTAGTTAGATATATACAGATAACTATTGGTAGTAACAAATATTCGTAATAAATAGTAATAGCAACAAATCTCCAAGGATTGTAATTGTCCATGCTTATAAAATGTGTTGTTAAGGTAACAATACTAATAATGAAAGTTA	TATATGGTATATAAGTGT	20	PASS	ClusterIDs=HG3_PB_pbsv_740:HG3_Ill_manta_140:HG2_Ill_manta_183:HG2_Ill_SpiralSDKrefine_624:HG4_PB_SVrefine2Falcon1Dovetail_455:HG4_Ill_Cortex_135:HG3_Ill_Cortex_147:HG2_PB_assemblyticsfalcon_1043:HG2_PB_SVrefine2PB10Xhap12_602:HG2_PB_SVrefine2Falcon1plusDovetail_485:HG2_Ill_SVrefine2DISCOVARplusDovetail_569:HG2_Ill_Cortex_278:HG2_10X_SVrefine210Xhap12_563:HG2_Ill_tnscope_71:HG4_PB_assemblyticsfalcon_985:HG2_10X_allpass_101:HG2_PB_pbsv_722:HG3_Ill_MetaSV_177:HG2_Ill_MetaSV_196:HG3_Ill_Krunchall_904:HG2_Ill_Krunchall_880;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_563:HG2_Ill_Cortex_278:HG2_Ill_SVrefine2DISCOVARplusDovetail_569:HG2_PB_SVrefine2Falcon1plusDovetail_485:HG2_PB_SVrefine2PB10Xhap12_602:HG2_PB_assemblyticsfalcon_1043:HG3_Ill_Cortex_147:HG4_Ill_Cortex_135:HG4_PB_SVrefine2Falcon1Dovetail_455;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0309598;ClusterMaxSizeDiff=0.0309598;ClusterMaxEditDist=0.0309598;PBcalls=7;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-800;DistBack=-818;DistForward=-817;DistMin=-818;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:105218645-105219462;PctSeqSimilarity=0.9466;PctSizeSimilarity=0.9963;PctRecOverlap=0.9829;SizeDiff=-3;StartDistance=-4;EndDistance=10;GTMatch=0;TruScore=97;MatchId=147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:27:0|1:42:0:0:27:0|1:48:0:0:19:0/1:78:17:0/1:61:19:.:.:.
chr1	105428309	HG4_Ill_scalpel_606	TTGCCCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_198:HG3_PB_assemblyticsfalcon_999:HG2_PB_assemblyticsfalcon_1048:HG2_PB_assemblyticsPBcR_1030:HG4_PB_assemblyticsfalcon_987:HG3_10X_allpass_126:HG2_10X_allpass_102:HG4_Ill_Krunchall_915:HG3_Ill_Krunchall_909:HG2_Ill_Krunchall_885:HG2_PB_HySA_1373:HG4_PB_pbsv_728:HG4_PB_SVrefine2PBcRDovetail_397:HG4_PB_SVrefine2Falcon1Dovetail_457:HG4_Ill_svaba_821:HG4_Ill_scalpel_606:HG4_Ill_SVrefine2DISCOVARDovetail_512:HG4_Ill_GATKHCSBGrefine_484:HG4_10X_allpass_103:HG3_PB_pbsv_742:HG3_PB_SVrefine2PBcRDovetail_422:HG3_PB_SVrefine2Falcon1Dovetail_417:HG3_Ill_svaba_855:HG3_Ill_scalpel_701:HG3_Ill_GATKHCSBGrefine_449:HG2_PB_pbsv_724:HG2_PB_SVrefine2PBcRplusDovetail_485:HG2_PB_SVrefine2PB10Xhap12_603:HG2_PB_SVrefine2Falcon1plusDovetail_487:HG2_Ill_svaba_827:HG2_Ill_scalpel_642:HG2_Ill_manta_184:HG2_Ill_breakscan11_91:HG2_Ill_SVrefine2DISCOVARplusDovetail_571:HG2_Ill_GATKHCSBGrefine_438:HG2_10X_SVrefine210Xhap12_565:HG4_Ill_MetaSV_202:HG3_PB_HySA_1067:HG3_Ill_MetaSV_179:HG2_Ill_tnscope_72;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_565:HG2_Ill_GATKHCSBGrefine_438:HG2_Ill_SVrefine2DISCOVARplusDovetail_571:HG2_Ill_breakscan11_91:HG2_Ill_manta_184:HG2_Ill_scalpel_642:HG2_Ill_svaba_827:HG2_PB_SVrefine2Falcon1plusDovetail_487:HG2_PB_SVrefine2PB10Xhap12_603:HG2_PB_SVrefine2PBcRplusDovetail_485:HG2_PB_pbsv_724:HG3_Ill_GATKHCSBGrefine_449:HG3_Ill_scalpel_701:HG3_Ill_svaba_855:HG3_PB_SVrefine2Falcon1Dovetail_417:HG3_PB_SVrefine2PBcRDovetail_422:HG3_PB_pbsv_742:HG4_10X_allpass_103:HG4_Ill_GATKHCSBGrefine_484:HG4_Ill_SVrefine2DISCOVARDovetail_512:HG4_Ill_scalpel_606:HG4_Ill_svaba_821:HG4_PB_SVrefine2Falcon1Dovetail_457:HG4_PB_SVrefine2PBcRDovetail_397:HG4_PB_pbsv_728;NumExactMatchSVs=25;ClusterMaxShiftDist=0.173502;ClusterMaxSizeDiff=0.173502;ClusterMaxEditDist=0.173502;PBcalls=16;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=594;DistForward=48803;DistMin=594;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=28;REFWIDENED=1:105428310-105428667;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=148.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:0:33:1:26:1/1:0:29:0:28:1/1:0:30:./.:2:11:.:.:.
chr1	105866770	HG2_Ill_svaba_833	GGTATTTCATTGTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGAGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCACCCACCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGT	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_424:HG4_Ill_Krunchall_925:HG4_PB_assemblyticsfalcon_995:HG3_PB_assemblyticsfalcon_1004:HG2_PB_assemblyticsfalcon_1051:HG3_Ill_Krunchall_920:HG2_Ill_Krunchall_892:HG2_PB_assemblyticsPBcR_1034:HG3_PB_HySA_1080:HG2_PB_HySA_1382:HG3_PB_pbsv_746:HG4_PB_pbsv_731:HG4_PB_SVrefine2PBcRDovetail_398:HG4_PB_SVrefine2Falcon1Dovetail_460:HG4_Ill_svaba_831:HG4_Ill_scalpel_611:HG4_Ill_manta_169:HG4_Ill_SVrefine2DISCOVARDovetail_513:HG4_Ill_GATKHCSBGrefine_486:HG4_10X_allpass_104:HG3_PB_SVrefine2Falcon1Dovetail_419:HG3_Ill_svaba_864:HG3_Ill_scalpel_707:HG3_Ill_MetaSV_181:HG3_Ill_GATKHCSBGrefine_456:HG3_10X_allpass_129:HG2_PB_pbsv_727:HG2_PB_SVrefine2PBcRplusDovetail_487:HG2_PB_SVrefine2PB10Xhap12_607:HG2_PB_SVrefine2Falcon1plusDovetail_489:HG2_Ill_svaba_833:HG2_Ill_scalpel_645:HG2_Ill_manta_187:HG2_Ill_breakscan11_92:HG2_Ill_SpiralSDKrefine_631:HG2_Ill_SVrefine2DISCOVARplusDovetail_576:HG2_Ill_GATKHCSBGrefine_446:HG2_10X_allpass_104:HG2_10X_SVrefine210Xhap12_567:HG4_Ill_MetaSV_203:HG2_Ill_tnscope_73:HG2_Ill_MetaSV_200;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_567:HG2_10X_allpass_104:HG2_Ill_GATKHCSBGrefine_446:HG2_Ill_SVrefine2DISCOVARplusDovetail_576:HG2_Ill_SpiralSDKrefine_631:HG2_Ill_breakscan11_92:HG2_Ill_manta_187:HG2_Ill_scalpel_645:HG2_Ill_svaba_833:HG2_PB_SVrefine2Falcon1plusDovetail_489:HG2_PB_SVrefine2PB10Xhap12_607:HG2_PB_SVrefine2PBcRplusDovetail_487:HG2_PB_pbsv_727:HG3_10X_allpass_129:HG3_Ill_GATKHCSBGrefine_456:HG3_Ill_MetaSV_181:HG3_Ill_scalpel_707:HG3_Ill_svaba_864:HG3_PB_SVrefine2Falcon1Dovetail_419:HG4_10X_allpass_104:HG4_Ill_GATKHCSBGrefine_486:HG4_Ill_SVrefine2DISCOVARDovetail_513:HG4_Ill_manta_169:HG4_Ill_scalpel_611:HG4_Ill_svaba_831:HG4_PB_SVrefine2Falcon1Dovetail_460:HG4_PB_SVrefine2PBcRDovetail_398:HG4_PB_pbsv_731;NumExactMatchSVs=28;ClusterMaxShiftDist=0.168013;ClusterMaxSizeDiff=0.166405;ClusterMaxEditDist=0.271405;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-274;DistBack=20538;DistForward=735;DistMin=735;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=1:105866771-105867061;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=149.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:./.:1:3:0:2:1/1:0:8:0:19:1/1:0:38:./.:.:.:.:.:.
chr1	106969624	HG2_PB_SVrefine2Falcon1plusDovetail_495	TGTATATGTGTGTATATATATATACATATATATATACATATATATATATCTATATATATGTATATATACGTATATATACATATATATGTATATATGTATATATACGTATATATGTATATATACGTATATATGTATATATACGTATATATACGTATCTATATCTAT	GAC	20	PASS	ClusterIDs=HG3_PB_pbsv_756:HG4_Ill_GATKHCSBGrefine_490:HG3_PB_HySA_1095:HG2_Ill_GATKHCSBGrefine_448:HG2_PB_pbsv_736:HG2_Ill_SpiralSDKrefine_637:HG4_PB_SVrefine2Falcon1Dovetail_467:HG4_Ill_manta_170:HG4_Ill_SVrefine2DISCOVARDovetail_518:HG3_PB_SVrefine2PBcRDovetail_432:HG3_PB_SVrefine2Falcon1Dovetail_427:HG2_PB_SVrefine2PBcRplusDovetail_492:HG2_PB_SVrefine2PB10Xhap12_613:HG2_PB_SVrefine2Falcon1plusDovetail_495:HG2_Ill_manta_188:HG2_Ill_SVrefine2DISCOVARplusDovetail_582:HG2_10X_SVrefine210Xhap12_572:HG4_PB_SVrefine2PBcRDovetail_404:HG2_PB_PB10Xdip_69:HG2_PB_HySA_1396:HG4_Ill_svaba_838:HG4_Ill_scalpel_620:HG4_10X_allpass_106:HG3_Ill_svaba_874:HG3_Ill_scalpel_718:HG2_Ill_svaba_840:HG2_Ill_scalpel_653:HG2_Ill_250bpfermikitraw_905:HG2_Ill_150bpfermikitraw_812:HG2_10X_allpass_105:HG3_Ill_Krunchall_931:HG2_Ill_Krunchall_900:HG2_Ill_Krunchall_899:HG4_PB_pbsv_742:HG4_Ill_MetaSV_205:HG3_Ill_MetaSV_184:HG2_Ill_MetaSV_201;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_572:HG2_Ill_SVrefine2DISCOVARplusDovetail_582:HG2_Ill_manta_188:HG2_PB_SVrefine2Falcon1plusDovetail_495:HG2_PB_SVrefine2PB10Xhap12_613:HG2_PB_SVrefine2PBcRplusDovetail_492:HG3_PB_SVrefine2Falcon1Dovetail_427:HG3_PB_SVrefine2PBcRDovetail_432:HG4_Ill_SVrefine2DISCOVARDovetail_518:HG4_Ill_manta_170:HG4_PB_SVrefine2Falcon1Dovetail_467;NumExactMatchSVs=11;ClusterMaxShiftDist=0.165017;ClusterMaxSizeDiff=0.165017;ClusterMaxEditDist=0.20598;PBcalls=13;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-162;DistBack=-4014;DistForward=-165;DistMin=-4014;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:106969624-106969788;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9938;PctRecOverlap=0.9818;SizeDiff=1;StartDistance=-1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:6:25:0:13:1/1:0:21:0:18:1/1:0:32:./.:.:.:.:.:.
chr1	108733326	HG2_PB_assemblyticsPBcR_1056	TTTTAATCAGTTGAGTTTTGTCTATATAAACAAATTTTCCTACTGGGGAGGTGGAGACGTGTGGGAAGAGACCTCACATCAAAACCTCCTAACGATGTGACTGCCACTTGAGGAAAAGTCACAATGGTGCTCCTCTGAAACAGAATGTTCTGTGTGGTTGGTGCAGAATTCTCTGGGGACACCCCTCCCTTGGGTTTTGACATGTGAACCCTCCTCAGTCACCACTAGGTACACAAAGCGTCCTTGCCAAAAATGCAAGACAGCTCTACAAACCTTTTGTTTCAATAAGGAAGAAATGTGTTTCAAAAGATTCGACTTGATAGCTAACCCAGAATTTCTTATGAAAGGCTAGTTTGTATCAAATAAACAAATACAACTTACACTTGCAAATCTAAATATAAGAGTGTCTTTAAACAAATATGAAGAACACTTAACTTTTTTTTTTTCTTTTTGAGATGGAGTCTCACTCTGTCACCCAGGTTGGAGTGCAGTGATGCAATCTCAGCTTGCTGCAACCTCTGCCTCCCAGGCTCAAGTGATTCTCCTGCCTCAGCCTCCTGGGACTACACACACCCACCACCACACCCGGTTAATTTTTGCATTTTTAGTAGAGATGGGGTTTTACCATATTGGCCAGGCTGGTCTTGAACTCCTGACCCCAAGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCACTGCACCTGAACAAGAACACTTAACTTTAAAAGGAGAAACACTGCTTTTTTCTAGGAATTAAAAATCCAGATAAGCTTTGCAGAAATAACATTTTGGACTGAATTGGTCCACAGAAAGTACACAGTCCAGGCCTCTGATATAACAGATGAGGATACCAGGGTATGGGGCTTGGAATATAGAATGTGCTCAAACTAGAACTGACCCATGACTGAATGGATGCTTCAATATTCCCAAAGTTCACATGGCTAATAGAAAGAGTTTTACTAAATTTCAACATGACAGAACTCAACTGACAGTTTTTTGGGCACGAAGTACCAATTATCCAAAATAAACTCAATAGTCCACATGCTCATGATCTCCCAGTCTACCGGGTCAAACATCCAAAGAGCAAATATACTTATAAAGTAATTATTATATACAATAATAAATTCCAAATGAAAAATGACTTGGAAATACTGCAATAGGAGTATGTACGAAGCACAACATGCTGAGAAGGAGCCTGTAGGTTAGCCTTCTGGGGAAGAGAAGGGTTAGCCTAAGCTCGGTACTGATAACTAGGGTCTATCAATTAAGGCATATTATGAGGAAACCTCAGCACTAGTGAAACCCGAGAGTAAAAGCCACTTCCACTGCCCCCTTCCAGGAACAGAAACCGAAACATAACATCAGAAAATTTCCAATCACCACCCCACTCCCAAATACACGTAGAGTGATTATTCCAGTTCTCTGAACTGGGGAGGGCGCATCTTTAGCCTAGACGCCCCTCTGGGTGACTAATGACAGGTGAGCACATTGAACAAGGTGACTCCTAAGACAAGGCTGTATGTAGCCAACATCTTGAGAGCAATCTGAAGTTGGAGATTTTACTACAGCCAAGGAGAAAACGGAGAAAAATACTTGAGAAATGTGTTAGCTGTGTTGTTATTCTTAATAAACGGTAACGCTGGTCAACGACCTGAACACTGCAGTGGGCCCAGGTCAAGCTTGACAACATGTAAATTTTGCCCTCTCTGCCCAATGCCTCTCCAGGGCTCCCAGCCCCAACGTCTCTCTGATTACAGCCCCAGTGAGACCCACCTTCGCTTCCTCTAGAGATTGAATGGCCCCTACATCCTCCAGGCCTTCCTGAAGCTCAAAAATGTCCAAGGTCCCATCCTTGTTATAGTCCAGGTACCAAAAGAGATCTCCGTAGAGGGAGTCCATCGAGGATGTCTCCCTCGCAGCTCCGCGGCCTGAGTGAGCCCCAGCGGGGTGGAAGTGCGACCGACGAACGGGATCTCTGCCCACCACACACGTCCAGTGGGAAGAGGCCTAAGACAGCATCCTCCTCAGGGGCGCCAAACACAATGCACCTTCATCGGTTAAAGCTCTGGAAGGAGAGGGCTCATCCTAACGGCTTCAGCGCAAAGGCGCGAGCGCGCAGGACCCGGGACCTGCGTGGGACCGCACTCTGGGCTGCGCTGGGAGACCGCGGAGTTCCTGCCTCACTCACGTCTGATCAGAAGCCCCGGCTCCCACTCCAGGAAGAGTCCAGTCGGGGCAACTCAAGCCCCTTTCCCCAGAAACTTCCAGGGAGAACCCAGCACAGGGCCATCTGAAAGTATAGCTTCTCTTTTGGAGAGAAGTAGGTTGGGAATGTTGGGACATGGGCTATTGCAGCATAAGTGACTGGCGGTGGCGGCCTGCCAACATTTAAAAAAAATTGTTTGGCTGCACCTGTCTAGGAATCCTTCTTTTTAAAAATCCTTATAATGATTTTTTAAAATAAAATAATTTTATTGTAGATTCAGGGGTTACACCATCAGCTTGTTACAAGGGTATACTGTGTGATACTGGGGTTTGAGCTCCTAATCGTGCCATCACCCAGGTTGTGAACAAAGTACCCAGTAGGAAGCTTTCCAGCCCTTGCCCTCCTCCCTCCCTCCCCCCTTTTGGAGTCCCTAGTGTCTATTGTTCCCATCTTTATGCCCCATTTACCCAAGGTTTAGCTCCCCCTGTAAATGAGAACACAGTATTTGTTTTTCTGTTTCTACAATAATTCGTTTAAGTTATTGGCTTCCAGCTGCATTCATATTGCTGCAAAGGACATGATTTTGCTCCTTTTTTATGGCTGCATAGTATTCCATGGTGTGTATGTACCACATTTTCTTTATCCAATCTGCTGCTGATGGGTACCTACATTGTGTTGTAGGAATCCTTTTCTAAGGTTGCAGCACTGGAGAATTGCTGTAATAAAGACTAGGAATTGAATGAAAATCTGCCCACATGGGCCCTTTCTTCTGTGACACCTCCCCTCACAGTTTTTTATCTTTTATCTTCATCCAACCACTACAATGGCTCCAGGGCAAGCCTATCCTTCAGCTGTTAGTGGCTGGATTGGAAAGATGATCTCAAAATAGGCAAAAGTTCAGTGATCTTGGGTCCCAGAGAGAAGTCAGCAGATACTCATAAATACTATCTAAGGCTTCCTCTTAATCCTCACCCTCCAGAACCACAGAGGGCCCTGGCTTCCCCAGACCAACACCTGTGCTCCCTCATCCTGCACCACTGGGAATATGGAGGTGCAGTTTCACAATAAAAACTCTCCACTTTTTATGTAATTTATTTTCCTAAATATGGAGATTGGGTACCCTAAAAAGTTGAATATTAAAATTCAAAAAGAAAATTTAATTTAGCCATTATCTGTAAGCTCTTGCTCTACACTACCCATCATGTCAGATACTGGGGACAAAAACAGACCATCACATGTCCTTGAAATACTCATAGGTTTCCCTCTGGGAGGAGGTTGCACCATGGTTAGTCAAAAAAACTACTGTACGCTTCTCAGTAAACATTTTCCCCCAGAGCTGCTGAGCAGTGGCAAATGTCTAATGCTGTTTCACAAGATGTGCTGTGGCCCAATCAAGAATGAATTCTTTCAAAAAGAGAATTTTATGGTCCACAGGGAATGGTCCTTCCCTGTGCAACACAGAAAATGTAGGTAGTGGCAAAGAGCCACAGAAGGCAGATAGCCAGGCAGAGAATGAGCCTTGGGTTAGAGTCTACAGGACCAAGCAGAAAAGACAGAAGTCGTGGCCAGGGTGATAAGGAAAACAGGCTGACAGCATTTAACAGAATTGACAGGAGAGAACAAACCATAGAGTTGAGAGTTTCATCTAATAAAAGGCAGGTAGTTTTGTTGAATAGCTCTTTCTGCTTTTTGAAATTACCC	AAATAAAATAATTTTAT	20	PASS	ClusterIDs=HG2_Ill_Krunchall_908:HG3_PB_pbsv_760:HG2_PB_pbsv_742:HG4_PB_pbsv_748:HG3_10X_allpass_131:HG2_Ill_SpiralSDKrefine_644:HG4_PB_SVrefine2PBcRDovetail_408:HG4_Ill_SVrefine2DISCOVARDovetail_523:HG2_PB_assemblyticsPBcR_1056:HG2_PB_SVrefine2PBcRplusDovetail_495:HG2_PB_SVrefine2PB10Xhap12_619:HG2_Ill_SVrefine2DISCOVARplusDovetail_588:HG2_10X_SVrefine210Xhap12_576:HG2_Ill_tnscope_74:HG3_PB_assemblyticsfalcon_1029:HG3_PB_SVrefine2Falcon1Dovetail_432:HG4_10X_allpass_107:HG2_PB_PB10Xdip_73:HG2_PB_assemblyticsfalcon_1071:HG2_PB_SVrefine2Falcon1plusDovetail_500:HG4_Ill_MetaSV_208:HG3_Ill_MetaSV_186:HG2_Ill_MetaSV_203:HG4_PB_assemblyticsfalcon_1021:HG4_Ill_Krunchall_948;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_576:HG2_Ill_SVrefine2DISCOVARplusDovetail_588:HG2_PB_SVrefine2PB10Xhap12_619:HG2_PB_SVrefine2PBcRplusDovetail_495:HG2_PB_assemblyticsPBcR_1056:HG4_Ill_SVrefine2DISCOVARDovetail_523:HG4_PB_SVrefine2PBcRDovetail_408;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0133111;ClusterMaxSizeDiff=0.0133111;ClusterMaxEditDist=0.0133111;PBcalls=13;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3909;DistBack=-2477;DistForward=-1433;DistMin=-2477;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:108733326-108737251;PctSeqSimilarity=0.9974;PctSizeSimilarity=0.999;PctRecOverlap=0.9949;SizeDiff=4;StartDistance=-20;EndDistance=0;GTMatch=0;TruScore=99;MatchId=151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:110:./.:0:2:0:2:./.:1:12:0:10:1/1:0:30:1/1:3:285:5046:.:.
chr1	109597719	HG2_Ill_manta_192	GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTTGTTTTTGT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_754:HG4_PB_assemblyticsfalcon_1030:HG3_PB_assemblyticsfalcon_1036:HG2_PB_assemblyticsfalcon_1079:HG2_PB_SVrefine2Falcon1plusDovetail_506:HG4_Ill_Spiral_60:HG4_Ill_MetaSV_209:HG3_PB_HySA_1112:HG3_Ill_Spiral_737:HG3_Ill_MetaSV_188:HG2_PB_HySA_1431:HG2_Ill_MetaSV_204:HG4_PB_HySA_1089:HG4_Ill_scalpel_634:HG4_Ill_GATKHCSBGrefine_498:HG4_10X_allpass_108:HG3_PB_pbsv_767:HG3_Ill_scalpel_727:HG3_Ill_GATKHCSBGrefine_466:HG3_10X_allpass_134:HG2_PB_SVrefine2PBcRplusDovetail_501:HG2_PB_SVrefine2PB10Xhap12_625:HG2_Ill_scalpel_666:HG2_Ill_manta_192:HG2_Ill_GATKHCSBGrefine_459:HG2_10X_allpass_108:HG4_PB_SVrefine2PBcRDovetail_412:HG4_PB_SVrefine2Falcon1Dovetail_476:HG4_Ill_SVrefine2DISCOVARDovetail_529:HG3_PB_SVrefine2PBcRDovetail_437:HG3_PB_SVrefine2Falcon1Dovetail_437:HG3_Ill_SVrefine2DISCOVARDovetail_464:HG2_PB_pbsv_750:HG2_PB_SVrefine2PBcRplusDovetail_500:HG2_PB_SVrefine2PB10Xhap12_624:HG2_PB_SVrefine2Falcon1plusDovetail_505:HG2_Ill_SVrefine2DISCOVARplusDovetail_591:HG2_Ill_tnscope_75;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_108:HG2_Ill_GATKHCSBGrefine_459:HG2_Ill_manta_192:HG2_Ill_scalpel_666:HG2_PB_SVrefine2PB10Xhap12_625:HG2_PB_SVrefine2PBcRplusDovetail_501:HG3_10X_allpass_134:HG3_Ill_GATKHCSBGrefine_466:HG3_Ill_scalpel_727:HG3_PB_pbsv_767:HG4_10X_allpass_108:HG4_Ill_GATKHCSBGrefine_498:HG4_Ill_scalpel_634:HG4_PB_HySA_1089;NumExactMatchSVs=14;ClusterMaxShiftDist=0.12;ClusterMaxSizeDiff=0.12;ClusterMaxEditDist=0.12;PBcalls=19;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=3453;DistForward=-325;DistMin=-325;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=330;REFWIDENED=1:109597711-109598371;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:30:1/1:1:21:1:14:./.:1:15:0:17:1/1:0:38:0/1:4:14:.:.:.
chr1	111316405	HG3_PB_HySA_1133	AGAGAGAGAAGAGAGAGAGAGGAGAGAGAGAAGAGAGAGAGGTGAGAGAGAAGAGAGAGAGAGGAGAGAGAGAAGAGAGAGAGGTGAGAGAGAAGAGAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_592:HG4_PB_HySA_1107:HG3_Ill_GATKHC_1180:HG3_Ill_GATKHCSBGrefine_475:HG2_Ill_GATKHC_1128:HG2_Ill_GATKHCSBGrefine_472:HG3_Ill_manta_148:HG2_Ill_manta_196:HG2_10X_SVrefine210Xhap12_593:HG3_Ill_svaba_904:HG3_Ill_250bpfermikitraw_933:HG3_Ill_150bpfermikitraw_882:HG3_10X_allpass_137:HG2_Ill_svaba_875:HG2_Ill_scalpel_678:HG2_Ill_250bpfermikitraw_944:HG2_10X_allpass_111:HG2_PB_pbsv_759:HG4_Ill_svaba_877:HG4_Ill_Krunchall_976:HG4_Ill_GATKHCSBGrefine_506:HG4_Ill_250bpfermikitraw_943:HG4_Ill_150bpfermikitraw_896:HG3_PB_HySA_1133:HG2_PB_HySA_1455:HG2_Ill_svaba_874:HG2_Ill_scalpel_677:HG2_Ill_GATKHC_1127:HG2_Ill_250bpfermikitraw_943:HG2_Ill_150bpfermikitraw_850:HG2_PB_SVrefine2Falcon1plusDovetail_515:HG3_PB_pbsv_776:HG4_PB_pbsv_767:HG4_PB_SVrefine2PBcRDovetail_420:HG4_PB_SVrefine2Falcon1Dovetail_485:HG4_Ill_SVrefine2DISCOVARDovetail_536:HG3_PB_SVrefine2PBcRDovetail_441:HG3_PB_SVrefine2Falcon1Dovetail_444:HG3_Ill_SVrefine2DISCOVARDovetail_472:HG2_PB_SVrefine2PBcRplusDovetail_508:HG2_PB_SVrefine2PB10Xhap12_633:HG2_Ill_SVrefine2DISCOVARplusDovetail_600;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_850:HG2_Ill_250bpfermikitraw_943:HG2_Ill_GATKHC_1127:HG2_Ill_scalpel_677:HG2_Ill_svaba_874:HG2_PB_HySA_1455:HG3_PB_HySA_1133:HG4_Ill_150bpfermikitraw_896:HG4_Ill_250bpfermikitraw_943:HG4_Ill_GATKHCSBGrefine_506:HG4_Ill_Krunchall_976:HG4_Ill_svaba_877;NumExactMatchSVs=12;ClusterMaxShiftDist=0.251163;ClusterMaxSizeDiff=0.251163;ClusterMaxEditDist=0.251163;PBcalls=13;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-98;DistBack=4550;DistForward=-14;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=199;REFWIDENED=1:111316395-111316691;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:70:1/1:2:37:0:23:./.:7:22:1:13:1/1:0:36:./.:.:.:.:.:.
chr1	111838207	HG4_Ill_250bpfermikitraw_945	CAGAAGACAGGTGATTTCTGCATTTTCAGCTGAGGTACCGGGTTCATCTCATTGGGACTGGTT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_853:HG3_PB_HySA_1137:HG2_PB_assemblyticsfalcon_1106:HG2_PB_assemblyticsPBcR_1094:HG4_PB_pbsv_771:HG3_PB_pbsv_778:HG2_PB_pbsv_761:HG2_PB_HySA_1459:HG4_PB_assemblyticsfalcon_1053:HG4_PB_HySA_1111:HG4_Ill_svaba_879:HG4_Ill_manta_176:HG4_Ill_Krunchall_978:HG4_Ill_GATKHCSBGrefine_508:HG4_Ill_250bpfermikitraw_945:HG3_PB_assemblyticsfalcon_1060:HG3_Ill_svaba_908:HG3_Ill_scalpel_744:HG3_Ill_manta_149:HG3_Ill_Krunchall_973:HG3_Ill_GATKHCSBGrefine_477:HG3_Ill_250bpfermikitraw_937:HG3_Ill_150bpfermikitraw_886:HG2_Ill_svaba_878:HG2_Ill_scalpel_683:HG2_Ill_manta_197:HG2_Ill_SpiralSDKrefine_664:HG2_Ill_Krunchall_938:HG2_Ill_GATKHCSBGrefine_473:HG2_Ill_250bpfermikitraw_945;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_853:HG4_PB_assemblyticsfalcon_1053:HG4_PB_HySA_1111:HG4_Ill_svaba_879:HG4_Ill_manta_176:HG4_Ill_Krunchall_978:HG4_Ill_GATKHCSBGrefine_508:HG4_Ill_250bpfermikitraw_945:HG3_PB_assemblyticsfalcon_1060:HG3_Ill_svaba_908:HG3_Ill_scalpel_744:HG3_Ill_manta_149:HG3_Ill_Krunchall_973:HG3_Ill_GATKHCSBGrefine_477:HG3_Ill_250bpfermikitraw_937:HG3_Ill_150bpfermikitraw_886:HG2_Ill_svaba_878:HG2_Ill_scalpel_683:HG2_Ill_manta_197:HG2_Ill_SpiralSDKrefine_664:HG2_Ill_Krunchall_938:HG2_Ill_GATKHCSBGrefine_473:HG2_Ill_250bpfermikitraw_945;NumExactMatchSVs=23;ClusterMaxShiftDist=0.048;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.0487805;PBcalls=10;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=25476;DistForward=20251;DistMin=20251;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=62;REFWIDENED=1:111838208-111838331;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:51:1/1:1:4:0:21:1/1:0:16:0:9:1/1:0:28:./.:.:.:.:.:.
chr1	112074694	HG2_Ill_SpiralSDKrefine_671	AGGAAAGATTATAGCCCTGTACTCTGCTTCTTTGGCGTGGTTCCTTTCCTAGCTTAAGGTAGTTTTCTCACATGCATGTGCTGACCAGCACTCACTCAGCTGAAGGCTTCGG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_944:HG2_PB_assemblyticsfalcon_1110:HG2_PB_assemblyticsPBcR_1099:HG4_PB_assemblyticsfalcon_1057:HG3_PB_assemblyticsfalcon_1065:HG4_PB_pbsv_774:HG4_PB_SVrefine2Falcon1Dovetail_489:HG4_Ill_svaba_885:HG4_Ill_manta_177:HG4_Ill_SVrefine2DISCOVARDovetail_538:HG4_Ill_MetaSV_216:HG4_Ill_GATKHCSBGrefine_510:HG4_Ill_Cortex_145:HG4_10X_allpass_112:HG3_PB_pbsv_781:HG3_PB_SVrefine2Falcon1Dovetail_448:HG3_Ill_svaba_915:HG3_Ill_scalpel_749:HG3_Ill_manta_151:HG3_Ill_MetaSV_192:HG3_Ill_GATKHC_1189:HG3_Ill_GATKHCSBGrefine_480:HG3_Ill_Cortex_159:HG3_10X_allpass_138:HG2_PB_pbsv_765:HG2_PB_SVrefine2PBcRplusDovetail_511:HG2_PB_SVrefine2Falcon1plusDovetail_518:HG2_Ill_svaba_885:HG2_Ill_scalpel_688:HG2_Ill_manta_199:HG2_Ill_breakscan11_94:HG2_Ill_SpiralSDKrefine_671:HG2_Ill_MetaSV_209:HG2_Ill_GATKHC_1135:HG2_Ill_GATKHCSBGrefine_476:HG2_Ill_Cortex_302:HG2_10X_allpass_112:HG2_10X_SVrefine210Xhap12_596:HG4_Ill_Krunchall_981:HG3_Ill_Krunchall_978;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_596:HG2_10X_allpass_112:HG2_Ill_Cortex_302:HG2_Ill_GATKHCSBGrefine_476:HG2_Ill_GATKHC_1135:HG2_Ill_MetaSV_209:HG2_Ill_SpiralSDKrefine_671:HG2_Ill_breakscan11_94:HG2_Ill_manta_199:HG2_Ill_scalpel_688:HG2_Ill_svaba_885:HG2_PB_SVrefine2Falcon1plusDovetail_518:HG2_PB_SVrefine2PBcRplusDovetail_511:HG2_PB_pbsv_765:HG3_10X_allpass_138:HG3_Ill_Cortex_159:HG3_Ill_GATKHCSBGrefine_480:HG3_Ill_GATKHC_1189:HG3_Ill_MetaSV_192:HG3_Ill_manta_151:HG3_Ill_scalpel_749:HG3_Ill_svaba_915:HG3_PB_SVrefine2Falcon1Dovetail_448:HG3_PB_pbsv_781:HG4_10X_allpass_112:HG4_Ill_Cortex_145:HG4_Ill_GATKHCSBGrefine_510:HG4_Ill_MetaSV_216:HG4_Ill_SVrefine2DISCOVARDovetail_538:HG4_Ill_manta_177:HG4_Ill_svaba_885:HG4_PB_SVrefine2Falcon1Dovetail_489:HG4_PB_pbsv_774;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0363636;PBcalls=11;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=22;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-111;DistBack=-111;DistForward=-111;DistMin=-111;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:112074695-112074808;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:0|1:28:4:1:28:0|1:45:1:0:23:0/1:45:16:./.:.:.:.:.:.
chr1	112691790	HG3_PB_SVrefine2PBcRDovetail_444	TTGGAAAATTTGCAGCCTGACCATGCTGTAGAAAAGAAAAACCAATTTTCTGGGGGAAAAATTCAAGCTGGCTGAAGAAATTTGCATAAGCAACAAGGCACCAAATGTTAATAGCCAAGATAATGGGGAAAATGTCTCCAGGGCATTTCAGAGATCTTCACAGCAGCCTTTCCCATCACAGGCCCAGAAAGCTAGGAGGGAAAAATGGTTTCATGGGCTGGGCCCAGGACCCCACTACTCTGTGTAGCCTCAGAACATGGCACCCTGTGTTCCAGCCACTCCAGCTCCAGCCATGGCTAAAAGAGGCCAAGGTACAGCTTGGGTCATTGCTTCGGAGGGTGCAAGTCCCAAACATTGATAGCTTCCATATGTGTTGGGCCTGTGAGCACACAGAAGACAAGAGTGGAGGTTTGGGAACCTCCATCTAGATTTCAGATGATGTGTGGAAACACCTGGATATCCAGGCAGAAGTCTGCTGCAGGGGTGAAGCCCTCACAGAGGACCTCTACTAGGTCAAGCAGAGGGGAAATGTGGGGTTGGAGCCCCCACACAGAGTCCCCACTAGGGAACTGCCTAGTGGAGCTGTAAGAAGAGGGCCACCATCCTCCAGACCCCAGAATGGTAGATCTACCAACACTTGCACCATGCACCTGGAAAAGCCATGGGCACTCAATGCCAGCTGTGAAAGCAGCCATGGGGGCTGCACCCTGCAGAGCCAAGGGGCAGAGCTTCCCAAGGTCTTGGGAGCCCACCCCTTGCCTCAGCATGCCCTTGACATGAGACATGGAGTCAAAGGTGATTATTTCAGAGCTTTAAGATTTAATAGTTGCCCTCTGGATTTTAGACTTGCATTGGGTCTGTAGCCCCTTGGTTTTGGCCAACTTCTCCCTTTTTGAATGGGAACATTTACCCAATGCCTGTACTCCCATTGTATCTTAGAAGTAACTAACTTGTTTTTGGTTTTACAGGCTCATAGGCAGAAGGGACTTGTCTCAGGTGAGACTTTGGACTTGGACATTTGAGTTAATGCTGGAATAAGCTAGCACTTTCAGAGACTGTTGGGAAGGCATGATTGGTGTTAAAATGTGAGAAGAACATGAGATTTGGGAGACTGCAGGGTCAGAATGATATGGTTTGGTTCTGTGTCCCTGCCCAAATCTCATCTCAAATTGCAATCCCCTCATGTCAGGGGAGGGACCTGGTGGGAGGTGATTGGGTCATGGGGGTGGTTTTCTCCATGTTGTTCTCGTGATAGTGAGTGACTTCTCATAAGATTTGGTGGTTTAAAAGTGTGTGGCAATTCCCCCTTCATGCACTCTCTCTCTTTCTCCTGTTGCAATGTAAGATGTGCCTTGCTTCCCCTTCCCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAACTGTGAGTCAATTAAGCCTCTTTTCTTTACAAATTACCCAATCTCAAGTAGTTTTTTATAGCAGTGTGAAAAAGGACTAACACAAGGCCCAATATTGGAGGGAGCTTTCTAATTTTAAAGAATTGAAAATGAAGGCCAGCAAGAGATGAGGAGAGAGAGAGAAAGCCAGTATGAGTTACCAGCACAGGTGATTTAACAGTACACCTTCATGAGTGGTTGCCCAGAAACGTTTTTCCACTGAGTTTGTCCTCAGTAGCCTTGACTAAGCAAAAGCCAGTGTGGCAGAAATGGGAGAAGAAAGAGTGCACCAAAATATGAGATTGGAGAGACAGGTGGGCCAGAAAACGTAGGATGTCAAGGATTTAGGATTTTATTCTAATCCCAGGAGGAATCTTAAATCGGAATCTTAAGTCTATTTTCATTTACACAATGAAGTGCTTTGATTAGGTTTGTATTTTAAAAAAAATTCTTCTGGCCCAATATAGAGAATGGTCAGCATATTAGAGAGAGTGTAAAAATGGTGTGGAGATACTCATTAAGAGGCTATCATATTAATCTAGGCAGTCTAATAGCTTGAACTAAGGAAATGTCAAGGAAGATAGAGAGAAAAGATATTTAGGAAATAAAATATATAAATTTGATGATGGACTAGGTGTAAGGAATAAAGAAAGGGAAAATGTCAAGGACAATGACAATAAGGATATCCACCCATGGAAAGGAAAATGTCAAGGACAATGACAAAGAGCTCACTCTTGAATGGATAAGAATGTGTGAACACTAGAAAACTACCTAACTGGGTGGGGTGGGAGTGGGGAGGAAGGTGGGTGGAGAGAGTGTGAGCTTTGTTTTGCATATATAAAATTAGAATTGTCTTTGAAATTTTTTAAAAAATGGAGCAATCAAGTAGGCCAGTGGATGTATGGGTCTTGAGTTCAGAAGGAATGTCTAGGATGGTTTATACATTTGGGAATCATCAGTGTAGTCACTGAAGCCATGGGAATGGATGAGGTCACCAAGAGAGCTAGCATAGAACAAGAACAAAAGAGGCAAAGGTGGATACATCTGCAAAGGACTGAAGAGGTGCCAAGATAGGGGGAAAACCAGGCATGCAGTACCAATTGAATTCTCTCCCTGACAGGTGTGAGTTAGGACCCAGAGATTAAGGTTAATTGGTTTTGAGCACCAGCACTAAAGGAGCATGGGTAGTAGGGCAGGGAGGGGGCATTTCTGCCACATGCACACAGTGCCTAGAATGCCGGTCTGCAGGGAGTAATGAGGGGCAGAGCAGAAGCAGAGAGAAGAGGCCACACACCACACAGCCCAGACAGATGGGGTCTGGGCCTCCAGCTCCCCACCTTCCTTAAGTTCCATGGCCAAGGAGATACCTATGTGTGCTTCCTGTGAGCCCACTTTTCACCGTGAGCTGGTTTGAGTGTTGTTTTTCTTGCTGGTGAAGCATGAAGCCAGGAGAGAGCAAGCCTGTGTTGGAGGTAGGAAGCTGATGGTCCTGAGCAGAGCAGGCACAGGTAGACAGAGCCCAGAGAGTGAGAGAAAGCCAGATCTATGGGGCACCACGAGCTTGGCACTTGCACACAGTCTCAACTGAACTTCGTTGCAACCCTAAAAGATAAGAATTCTTGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGAATTCTTACCCTTCAATTTAGGTGAGAACACAGAGGCTTAGGGACTTTCTCAGGGTCACGACACTAGTGCTCAAAAGATGAGACTAATAACTAATCCTTCCGACGTCTGGTGCAAAACAGTAGTTATATAGGGGAGAGAAAAGAGTGACTGTTTTGTAAGGGTCTGTAAGGAGAAATAATTAGGAACCAGTATAGGTATATTAGTTAGTGATTAATGGAATAAAAATGGCACCTGGGAAGGATGACTTGAATTGCTATGATAAGGATAGATTAAAGAGGAAAGCTGGAAAAGGGGAAGTTTATTCCAATATCTAGTCCTAGTAGGAAGTGGCAGCATCTCCTGACCCTACCACAGTGGGCAGGGGTGGAGAAAGCAGAAAAGGATCAAGCCCCTTCATAGGCTCAGAGTGAAATAAAGCTTTCAAAGACAAGTAAAGAACCTCTACAAGTAATGGATGAGCTGATTTGCTTGGACCTGTTTTAGGTCTCAGTGACCTTATAGCTCCTCACACCCTAGGTGTGTTGCTCTTTGGTTCCCACTCACCTGTGGATGGAGGATGATGAGAAAAGGAAGAGGCTGGTTTGGGAGAGGGAGACTAAGGTGATCAGGAAAGCTACCAACGTCCCCACAAACCAGGGGTGGGCTCCAGATACAGAGGGGACAGGGAGAGTGATCTGGGACAACTATGCTAATGCTCCTTGAATTGGGTACTAGATTCTGAGAATGAGGGGCTGCCCTGAAAATGGGAGTCTGAGTTAAGAGTGGGAGAAATGAGCTTGGAATACGGGATGATCTGGAAAGGCAGGGTGATGCAAGGAAGGGGTCACTGTTGATTCTGGAGTGTTCTCGAATAGGGGGACTTGCTCGGAAGGGGAGAATAAGATCCGGGCATGTAGAGCTGCTCTAGGAAGGTGGAGACTATGGGAAATAGGAACCAGAAAGAGATGTTCTGGGAACAGGGCCGTACTGGAATGGAGCTTAGTGCAAGGAGTTGGAAAGCTAGTGAATGTAGGAGGCCTCAAGCCTATCCATGACACAAATTGCTTTCCTGAACTGATTTGGCAGGGATATCCCTTTTCAGAAAAGAGTGTCTCCGTGGCAAGTGTGAGGAAGGGACTTGCAGAGGGGGTCTGCACCCGCCTCAGTGGTGATGAATGGGCTGCAATCAGGCCAAGGGCTTGAAAATATTTTCCGTCAGATAGAAAAACCCTGTCATCTCTTTCCCCATTTTATTTCATTCTGTTTCACCTCATATTTCACTTAATGGGAGCTGCCAAGGAGACTCTGATTTTTTTTCCCCTCCTTCTCCAGCAGCTTATGCAGTCTGTCAGCCTGAGACATGGGTCTTTGGAAGACTCACAGTGAAATAAATTATAAAAGCCTCTAGTTTTAGGGTGTGTGTCCATGTGCATTTCTGTGTGTGCAGGCTTGCCTGTGCTCACCTGTGCACCTGAGCATGCATGCGTGTGTCAGCATAGGTGTGAGTGACAAAACTCAATCCATGTGGAACAAGGAGATGAATGTATGGGTTTGAGTTCTGCCTCTGATATTTAGCATCCCTGTGCACCCTGAGCCTCAATGGCCTCACTTGTAAAATGAATATAATAATACAGTCCCTTCATACTTCAGAAGCTTGTGTCACAGGGACATAAATACAGTCTGTGATCAATACATGCTACTGATAAGTACAACCACTATCTGTGTCCTTGAGTGGTTCCTCCTGATCCAGCCTGAGTTCATTGTGGTCTGGTTTGATGCTGCCTCCTCTGACATGCTGGACCCCCAATGCCTTGATCCTCTCAGAGCCATCACGCCAGTCCCTGATCTTAGCCCTGCTCCATTGACTGCCTCCTCCATGACTGCCCACAGGCCAGAGAAAGTCAGCAAACACATTTTAATGGAGAACCCCTAGACTTATTCACCTATTTGCTTAACAAATACCTATTGAGCATTTATTATTGAAGAGATTCTTTCCTGAGTCTGGGCAAACAGTGTTGGATAAAACAAAGGCCCTATGCACAAGGACCTTTCAAACAAGTTCAATACTTAGAGTTTAAGATAAGGAGTATTATGGTAGATCCAAGCCAGTGGATGATAGCAGTGCAGAGGAGGGCCCCTGGCCTCAAACTGACCCCTGAAGGAGGGGAGGGAGTTGGCCATGTGAAGGGAACATGTGCGAGGACCCTCAGGCTTTCCACTGCTCAGCAAATCTTTAAGCCCTCTTTTGAGATCCCCCAAGTCTGTCCGCTAATTTCTCTTCCACATTTTTTTTTGTTGAGGTATCCATCACCTCAAGCATTTATTCTTTCTTTGTGTTACAAACAATCCAATCATACTTTTTTAGTTATTTTTAAATGTACAATAAATTGTTGTTGACTGAAGTCACCTATTGTGTTATCAAGTACTAGATCTTATTCATTCTAAATACACTTTTTTTTATATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAGTGCTATCCCTCCCCCCTCCCCCCACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTGCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGACTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTCTAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAGTGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGTGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTTTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGTGAAAATTTTCTCCAATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTCTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTATTGCCTAGGTTTTCTTCTGGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGATGTAAGGAAGAGATCCAGTTTCAGCTTTCTACATATGGCTAGCCTGTTTTCCCAGCACCATTTGTTAAATAGAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTATTCCATTGATCTATATTTCTGTTTTGGTACCAGTGCCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGACTTAGGTTTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGGCATTGGTAGCTTTATGGGGATGGCATTGAATCTATAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCATTGAGCAGTGGTTTGTAGTTCTTCTTGAAGAGGTCCTTCACTTCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGATTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGCACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCATAATTGCCCTGGCCAGAACTTCCAACACTATGTTGACTAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGCTTTTGCCTATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATATGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGAGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATTATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGACTTTTGCATCAATGTTCATCAGGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAAAGATGCTGGCCTCATAAAATGAGTTAGGGATGATTCCCTCTTTTTCTATTGATTAGAATAGTTTCAGAAGGAATGGTACCAGCTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAGCTATTGATTATTGCCACAATTTCAGATCCTGTTATTGGTCTATTCAGAAATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGTGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCAGCCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTAATTTTCTGAAGGGTTCTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTACTTTGAATGCATCCCAGAGATTCTGGTATGTTGTGTCTTTGTTCTCATTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTTGTTATGTACTCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGTGGTTTTGAGTGAGATCCTTAATCCTGAGTTCTAGTTTGATTGCATTGTGGTCTGAGAGATAGTTTGTTATAATCTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAAGTATGTGGTCAATTATGGAATAGGTGTGGTGTGGTGCTGAAAAACATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGCAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCATTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAGGATAATTAGCTCTTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTAATCCAATTTGCCAGTCTGTGTCTTTTAATTGGAGAATTTAGTCCATTTACATTTAAAGTTAATATTGTTATGTGTCAATTCGATCCTGTCATTATGATGTTCGCTGGTTATTTTGCTTGTTAGTTGATGCAGTTTCTTCCTAGTCTCAATGGTCTTTTACATTTTGGCATGATTTTGCAGCAGCTTGTACTGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGTCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTCTCCTTCGCTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGAGTTTCTGCCGAGAGATCTGCTGTTAGTCTGATGGGCTTCCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCATTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCCCATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCTCATCAGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTTGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCGTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCATCAAAGTCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGGAACTGCGTTCATTTGGAGGAGTAGGGGCACTCTGCTTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTTGGTGTGGATGTTCTTTCTGTTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATAGCCTGCCGTGTGAAGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTTGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAAGTTACTTCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCTAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTGCTTGAGCTGTGGTGGGCTCCACCCAGTTGGAGCTTCCTGGCCGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGTGGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCCAGACTCCGTTGGCGTAGGACCCTCCGAGCCAGGTGCGGGATATAATCCCGTGGTGCGCCGTTTTTTAAGCCTGTCGGAAAAGTGCAGTATTCGGGTGGGAGTGACCCGATTTTCCATGTGGGTCTGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCACCCTGCTTCGGCTCGCGCATGGTGGGTGCCCACTGTCTAGCGCTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCATTGCTCACGCTGGGAGCTGTAGAACAGAGCTGTTCCTATTCGGCCATCTTGGTTCCTCCTCTCTTCCACATTTTTATCAATTACTCAAGTTGTTTTCACAGCCTCCAGATCTTCCTCCTCCATCAGCCCAATCCGTGACCACTGGGTTAATCCTCCCAAAGTATTGATACAATTAGGTCACTCACTGCTCAAACATTCCCATTTTATACAAAATGAAGTTCCAACCCCTTAACCTGGCTTCAAGACCTTCCACAAACAATGTTTCCAACTTCCTATCCCACAGTACCCAAATATTGGGTCAATGATAGCTCATTTCCAGTCTTTGCAAATACTGTGTTCTTTCCCCTTCTCTATCATTTCTCCCTGCTCTTCCATATGCTGGGAAAGTCCTACCTGCCTCCACATCCTGTTTTCCCCTTTGGGGATCACAGGCACACTTTGAGTCCTTGCCAAGATTCCACTGTCTCAGGATGCCTTCTAGAATCCCCTACCCCACATGCGAAGGAGATTTTCCCTTATCTATTGGATCAGGTGACCAAGAAAGCTCAATGTTGGACCCCTCCACACACAGACAAAAGGGATTCTTTTCATACCAGGGACAAGAGGAAACAATCATGGAACTTTGGGTATCAAGATCAATGGCAGGGTGGGCATAGGAGACTGAGGTGCTCATAAACATCATTTCACCTAGGTTGCTGTGAACATTGACTCATGACAGAATAAATGCACATGGTTATATCTATTTCTTCTCAAAATGTCAAATTTCTAAAATGACTACAAATTATTTTTAAAATATAAATTCACAAAGACAAAGATCATGGAAGTAGAGACTATAGTAAATGAGAAATATCACATAATCTTTGAACCTGGAAAGCAGATGGGAAACAACTGATTTCCCAGGACAGTGAAATTTAAGTTCCATGGTGAAGAAACAATGAGAGGCATCCCACCTGCATCAAATGCCTCCTACGCATCACTTCACAACCTCCTGGTCTTGCCTTTTGCCAATTACTCCTCACCATGTATTATGCCATAGCCAGCTGTTCATAGGATCTAAACAGATTCATGCAGGCACCAGCCACCAGTGCCTCACCTCATGTTTGCGCTGCCCTGCAGCTTTCCTGTTGACACTATGGGACTTGCTCAGTGCCCATCCTGCACAACCCAGAACTGCAGAGAAGTTAACTCCCTTTAGGTGAACTTTTGACCGGTGTGATCAAGAGATTAGTAAGTAAATTCATCCCTCTTCCTTCCCTCACATAGATTATACCAAGGTGCAGTCATATTTAAAAGCCATCGACTCCACTGCAGGAGTCAGTGGCTCTTGAACCA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_77:HG2_10X_allpass_113:HG4_PB_pbsv_776:HG4_Ill_Krunchall_985:HG3_Ill_Krunchall_983:HG2_Ill_Krunchall_948:HG4_10X_allpass_114:HG4_PB_SVrefine2PBcRDovetail_425:HG4_PB_SVrefine2Falcon1Dovetail_493:HG4_Ill_SVrefine2DISCOVARDovetail_541:HG4_Ill_MetaSV_218:HG3_PB_pbsv_785:HG3_PB_SVrefine2PBcRDovetail_444:HG3_PB_SVrefine2Falcon1Dovetail_451:HG3_Ill_MetaSV_193:HG2_PB_pbsv_769:HG2_PB_SVrefine2PBcRplusDovetail_514:HG2_PB_SVrefine2PB10Xhap12_639:HG2_PB_SVrefine2Falcon1plusDovetail_521:HG2_Ill_MetaSV_210:HG2_10X_SVrefine210Xhap12_599;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_599:HG2_Ill_MetaSV_210:HG2_PB_SVrefine2Falcon1plusDovetail_521:HG2_PB_SVrefine2PB10Xhap12_639:HG2_PB_SVrefine2PBcRplusDovetail_514:HG2_PB_pbsv_769:HG3_Ill_MetaSV_193:HG3_PB_SVrefine2Falcon1Dovetail_451:HG3_PB_SVrefine2PBcRDovetail_444:HG3_PB_pbsv_785:HG4_Ill_MetaSV_218:HG4_Ill_SVrefine2DISCOVARDovetail_541:HG4_PB_SVrefine2Falcon1Dovetail_493:HG4_PB_SVrefine2PBcRDovetail_425;NumExactMatchSVs=14;ClusterMaxShiftDist=0.000542152;ClusterMaxSizeDiff=0.000542152;ClusterMaxEditDist=0.000542152;PBcalls=10;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-12913;DistBack=1982;DistForward=-12913;DistMin=-12913;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:112691791-112704705;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:75:45:0|1:65:0:0:29:1|0:0:46:61:0:0/1:71:23:0/1:434:261:12881:.:.
chr1	112835082	HG3_PB_SVrefine2PBcRDovetail_445	CAAAATAAAAGAGGACACAAACAACTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCTCCCTCTCCCTCTCTCTCCACGGTCTCCTTCCACGGTCTCCCTCTGATGCCGAGCCGAAGCTGGACTGTACTGCTGCGATCTCGGCTCACTGCAACCTCCATGCCTGATTCTCCCGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGACGCCACGCCTGACTGGTTTTCGTTTTTTTTTGGTGGAGACGGGGTTTTGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATGGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCAAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGAGCCCAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCATCTGGGATATGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGTCCGCCATCCCATCTAGGAAGCGAGGAGCGCCACTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGAGGTGGGGAGCACCTCTGCCCCGCCACCCTGTCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCAGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCGGTCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCTGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCTCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGAGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGATGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGCGGGGGGTGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGAGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCACCCAGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCCTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGAGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCTTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_194:HG2_10X_allpass_114:HG4_10X_allpass_115:HG3_10X_allpass_139:HG4_Ill_Krunchall_986:HG3_Ill_Krunchall_984:HG2_Ill_Krunchall_949:HG2_PB_assemblyticsfalcon_1119:HG2_PB_assemblyticsPBcR_1106:HG4_PB_assemblyticsfalcon_1068:HG3_PB_assemblyticsfalcon_1074:HG2_PB_HySA_1470:HG2_Ill_breakscan11_95:HG4_Ill_MetaSV_219:HG4_Ill_GATKHCSBGrefine_511:HG3_Ill_GATKHCSBGrefine_482:HG2_PB_pbsv_771:HG2_Ill_MetaSV_212:HG2_Ill_GATKHCSBGrefine_477:HG4_PB_pbsv_777:HG4_PB_SVrefine2Falcon1Dovetail_495:HG4_PB_SVrefine2PBcRDovetail_426:HG4_Ill_SVrefine2DISCOVARDovetail_542:HG3_PB_pbsv_787:HG3_PB_SVrefine2PBcRDovetail_445:HG3_PB_SVrefine2Falcon1Dovetail_453:HG2_PB_SVrefine2PBcRplusDovetail_515:HG2_PB_SVrefine2PB10Xhap12_640:HG2_PB_SVrefine2Falcon1plusDovetail_522:HG2_10X_SVrefine210Xhap12_600;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_600:HG2_PB_SVrefine2Falcon1plusDovetail_522:HG2_PB_SVrefine2PB10Xhap12_640:HG2_PB_SVrefine2PBcRplusDovetail_515:HG3_PB_SVrefine2Falcon1Dovetail_453:HG3_PB_SVrefine2PBcRDovetail_445:HG3_PB_pbsv_787:HG4_Ill_SVrefine2DISCOVARDovetail_542:HG4_PB_SVrefine2PBcRDovetail_426;NumExactMatchSVs=9;ClusterMaxShiftDist=0.102497;ClusterMaxSizeDiff=0.102497;ClusterMaxEditDist=0.102497;PBcalls=15;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2578;DistBack=34352;DistForward=61759;DistMin=34352;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=23;REFWIDENED=1:112835083-112837683;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.9981;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:108:1/1:0:21:0:35:1/1:1:13:0:6:1/1:0:44:1/1:4:204:2572:.:.
chr1	113715631	HG2_PB_HySA_1477	CTTAAAGGTGTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_604:HG3_Ill_Krunchall_990:HG2_Ill_Krunchall_957:HG3_PB_HySA_1149:HG3_PB_pbsv_792:HG2_PB_pbsv_777:HG3_Ill_scalpel_756:HG3_Ill_SVrefine2DISCOVARDovetail_482:HG3_Ill_GATKHCSBGrefine_484:HG2_PB_SVrefine2Falcon1plusDovetail_528:HG2_PB_HySA_1477:HG2_Ill_manta_200:HG2_Ill_SpiralSDKrefine_679:HG2_Ill_SVrefine2DISCOVARplusDovetail_610:HG2_Ill_MetaSV_215:HG2_Ill_GATKHCSBGrefine_480;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_604:HG3_Ill_scalpel_756:HG3_Ill_SVrefine2DISCOVARDovetail_482:HG3_Ill_GATKHCSBGrefine_484:HG2_PB_SVrefine2Falcon1plusDovetail_528:HG2_PB_HySA_1477:HG2_Ill_manta_200:HG2_Ill_SpiralSDKrefine_679:HG2_Ill_SVrefine2DISCOVARplusDovetail_610:HG2_Ill_MetaSV_215:HG2_Ill_GATKHCSBGrefine_480;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00689655;ClusterMaxSizeDiff=0.00689655;ClusterMaxEditDist=0.00692042;PBcalls=5;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-289;DistBack=-549;DistForward=-232;DistMin=-549;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:113715632-113715934;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:15:0|1:34:1:2:15:0|1:35:0:0:10:0/1:21:27:./.:.:.:.:.:.
chr1	113799628	HG4_PB_SVrefine2Falcon1Dovetail_501	GGTAGTGATGTGATCACAACTCACTGCATCCTCGACCTCCCCGGGCTCAGGTGATTCTCCCACCTCAGCCGCCTGAGTAGCTGGGACTACAGGTGCACACCAGCACGCCCAACTAATTTTCTGTATTTTATGTAGAGATGGGGTTTCACTATGTTGCCAAGGCTGGTCTCGAACTCCTGGGCTCAAGCGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCTGGAATTGTACCAATTTTTTAAAATGTTAAAAAAAAGTTTTTTACTATTTATCATGAACATGTTTAAACATTAGAGAGAATAGTATATTATCTATTAGAGAGAATAGTATAAAGAATCTCATGCACCCATCATTCAGCTTCCATAACTATCAACATCCCGTTATTCTTGTTTCAATTCTACCCAGCTGTACCACTTTTTTGGAGGCGAAAGTACTGGA	G	20	PASS	ClusterIDs=HG2_PB_HySA_1478:HG3_PB_HySA_1150:HG4_10X_allpass_117:HG3_10X_allpass_141:HG2_10X_allpass_116:HG4_PB_assemblyticsfalcon_1078:HG3_PB_assemblyticsfalcon_1086:HG4_PB_pbsv_782:HG4_PB_SVrefine2PBcRDovetail_430:HG4_PB_SVrefine2Falcon1Dovetail_501:HG4_Ill_GATKHCSBGrefine_514:HG3_PB_pbsv_793:HG3_PB_SVrefine2PBcRDovetail_449:HG3_PB_SVrefine2Falcon1Dovetail_459:HG3_Ill_scalpel_757:HG3_Ill_manta_152:HG3_Ill_SVrefine2DISCOVARDovetail_484:HG3_Ill_GATKHCSBGrefine_485:HG2_PB_SVrefine2Falcon1plusDovetail_529:HG2_Ill_manta_201:HG2_Ill_breakscan11_97:HG2_Ill_SpiralSDKrefine_680:HG2_Ill_GATKHCSBGrefine_481:HG2_10X_SVrefine210Xhap12_605:HG4_Ill_Spiral_61:HG2_Ill_tnscope_79:HG2_Ill_Spiral_43:HG2_Ill_MetaSV_216:HG2_PB_pbsv_778;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_605:HG2_Ill_GATKHCSBGrefine_481:HG2_Ill_SpiralSDKrefine_680:HG2_Ill_breakscan11_97:HG2_Ill_manta_201:HG2_PB_SVrefine2Falcon1plusDovetail_529:HG3_Ill_GATKHCSBGrefine_485:HG3_Ill_SVrefine2DISCOVARDovetail_484:HG3_Ill_manta_152:HG3_Ill_scalpel_757:HG3_PB_SVrefine2Falcon1Dovetail_459:HG3_PB_SVrefine2PBcRDovetail_449:HG3_PB_pbsv_793:HG4_Ill_GATKHCSBGrefine_514:HG4_PB_SVrefine2Falcon1Dovetail_501:HG4_PB_SVrefine2PBcRDovetail_430:HG4_PB_pbsv_782;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0217391;ClusterMaxSizeDiff=0.0217391;ClusterMaxEditDist=0.0217391;PBcalls=12;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-462;DistBack=-463;DistForward=-425;DistMin=-463;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:113799629-113800093;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=159.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:25:0|1:37:1:1:30:0|1:43:0:0:28:0/1:33:7:0/1:43:11:.:.:.
chr1	114039827	HG2_Ill_SVrefine2DISCOVARplusDovetail_614	TAAGATCACACCACTGGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGATGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGAGCAGGGCACAGACAAACAAAAAGGCAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCTATCAGACTAACAGCAGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATTTCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAAGAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTACCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCATGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATCGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAAACAGGAAGAAGTTGAATCTCTGAATGGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTTACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCTCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACTCGTATGTTTATTGCGGCACTATTCACAATAGCAAAAACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATATTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGGTAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_607:HG3_10X_allpass_142:HG2_PB_pbsv_781:HG2_Ill_Krunchall_958:HG4_PB_assemblyticsfalcon_1080:HG2_PB_assemblyticsPBcR_1112:HG3_Ill_MetaSV_198:HG2_Ill_tnscope_80:HG4_PB_SVrefine2Falcon1Dovetail_503:HG3_PB_pbsv_796:HG3_PB_SVrefine2PBcRDovetail_451:HG3_PB_SVrefine2Falcon1Dovetail_461:HG3_PB_HySA_1156:HG3_Ill_SVrefine2DISCOVARDovetail_485:HG3_Ill_GATKHCSBGrefine_488:HG2_PB_SVrefine2PBcRplusDovetail_520:HG2_PB_SVrefine2PB10Xhap12_643:HG2_PB_SVrefine2Falcon1plusDovetail_531:HG2_Ill_SpiralSDKrefine_681:HG2_Ill_SVrefine2DISCOVARplusDovetail_614:HG2_Ill_MetaSV_217;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_607:HG4_PB_SVrefine2Falcon1Dovetail_503:HG3_PB_pbsv_796:HG3_PB_SVrefine2PBcRDovetail_451:HG3_PB_SVrefine2Falcon1Dovetail_461:HG3_PB_HySA_1156:HG3_Ill_SVrefine2DISCOVARDovetail_485:HG3_Ill_GATKHCSBGrefine_488:HG2_PB_SVrefine2PBcRplusDovetail_520:HG2_PB_SVrefine2PB10Xhap12_643:HG2_PB_SVrefine2Falcon1plusDovetail_531:HG2_Ill_SpiralSDKrefine_681:HG2_Ill_SVrefine2DISCOVARplusDovetail_614:HG2_Ill_MetaSV_217;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0224664;ClusterMaxSizeDiff=0.0224664;ClusterMaxEditDist=0.0224664;PBcalls=11;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-6050;DistBack=12491;DistForward=-6043;DistMin=-6043;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:114039828-114045892;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:54:0|1:41:1:0:34:0|1:19:0:0:20:0/1:22:6:0/1:393:180:6459:.:.
chr1	115796888	HG3_Ill_manta_155	TAAAAGAAAGAGGTGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_44:HG4_Ill_Krunchall_1001:HG3_Ill_Krunchall_998:HG2_Ill_Krunchall_966:HG4_PB_assemblyticsfalcon_1086:HG3_PB_assemblyticsfalcon_1096:HG2_PB_assemblyticsfalcon_1132:HG2_PB_assemblyticsPBcR_1117:HG2_PB_HySA_1489:HG4_PB_pbsv_787:HG4_Ill_MetaSV_224:HG3_Ill_MetaSV_201:HG2_Ill_tnscope_81:HG2_Ill_MetaSV_219:HG4_PB_SVrefine2PBcRDovetail_432:HG4_PB_SVrefine2Falcon1Dovetail_506:HG4_PB_HySA_1145:HG4_Ill_scalpel_673:HG4_Ill_manta_179:HG4_Ill_SVrefine2DISCOVARDovetail_552:HG4_Ill_GATKHCSBGrefine_517:HG4_10X_allpass_118:HG3_PB_pbsv_802:HG3_PB_SVrefine2PBcRDovetail_453:HG3_PB_SVrefine2Falcon1Dovetail_465:HG3_Ill_scalpel_764:HG3_Ill_manta_155:HG3_Ill_SVrefine2DISCOVARDovetail_491:HG3_Ill_GATKHCSBGrefine_493:HG3_10X_allpass_144:HG2_PB_pbsv_786:HG2_PB_SVrefine2PBcRplusDovetail_521:HG2_PB_SVrefine2PB10Xhap12_644:HG2_PB_SVrefine2Falcon1plusDovetail_534:HG2_Ill_scalpel_700:HG2_Ill_manta_203:HG2_Ill_breakscan11_98:HG2_Ill_SVrefine2DISCOVARplusDovetail_621:HG2_Ill_GATKHCSBGrefine_488:HG2_10X_allpass_117:HG2_10X_SVrefine210Xhap12_612:HG4_Ill_Spiral_62:HG3_Ill_Spiral_772;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_612:HG2_10X_allpass_117:HG2_Ill_GATKHCSBGrefine_488:HG2_Ill_SVrefine2DISCOVARplusDovetail_621:HG2_Ill_breakscan11_98:HG2_Ill_manta_203:HG2_Ill_scalpel_700:HG2_PB_SVrefine2Falcon1plusDovetail_534:HG2_PB_SVrefine2PB10Xhap12_644:HG2_PB_SVrefine2PBcRplusDovetail_521:HG2_PB_pbsv_786:HG3_10X_allpass_144:HG3_Ill_GATKHCSBGrefine_493:HG3_Ill_SVrefine2DISCOVARDovetail_491:HG3_Ill_manta_155:HG3_Ill_scalpel_764:HG3_PB_SVrefine2Falcon1Dovetail_465:HG3_PB_SVrefine2PBcRDovetail_453:HG3_PB_pbsv_802:HG4_10X_allpass_118:HG4_Ill_GATKHCSBGrefine_517:HG4_Ill_SVrefine2DISCOVARDovetail_552:HG4_Ill_manta_179:HG4_Ill_scalpel_673:HG4_PB_HySA_1145:HG4_PB_SVrefine2Falcon1Dovetail_506:HG4_PB_SVrefine2PBcRDovetail_432;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0969479;ClusterMaxSizeDiff=0.0969479;ClusterMaxEditDist=0.0969479;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-284;DistBack=2961;DistForward=-267;DistMin=-267;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:115796889-115797186;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:1/1:2:23:1:26:1/1:0:33:0:21:1/1:0:50:./.:.:.:.:.:.
chr1	116229483	HG2_PB_pbsv_787	GTTGTATCAATGAGGATAATAATAATATCTCTCTGACAGGGTTGTTGTGTAAGAATTACATTGAATATGGCAACAAGGCATGTAAATCGCATGGTAGAGAGTAGATGAGCTTGGCATGTGGTACATGTGTAACATTTGGTAGCTGTTTTTTTATAAGGACTTCTGTTTATATGTTGCACTATATGTGTATCCTGCTGGTTACATTGTCAACCAATAACTACCCTTAGGAAAGCAATGTAGAAATAGTAAGAAACCAAAAAGTTTTCTGTATTGATTCACTAATCTCTCTCCTAGGAAAACTATTTCCTACAATCATATATACACATGAATATACACAAAGGTGGTGTTTTGCAAAACAATCTGTAATCCTCCACAATGGAAATAATTTAAAACATAACAGTGGCTTATAAATTATGGTGTATCACCTGTTGAATCATGAAAGAATCTGTTAGAATAGTAAGTTACAAGAAATAGAATGCAGAAACATGTGAATACTGTGGTTGCAAATGAGGAAAATATGTCTGCAGGTATAAAATGATGGCTTGTACCATGTAGAACCAAAACAGTTGTTTTTCTTTTTACAAGATTTTAGAAAGTTTCCTGGTTGCTTTTTGTTTCATTTAAAAATTTTATACTTTTCTGAATTAAAAATAATAGCTGTTTTTGGTATAGAAATCCAAACATTAAAGAAAAGTATCATGCGGAAAATGAAGTTTTCAGCCCCTGCCCCAAAACAGTTTTTACCGATAAGGAGTTGGTATATATTCTTTCAAATATATGTAGATGTTTTTTAAGCTGAAATGGGAAAACAAAACAGAAATTGGGTCATTGCTCTCTCTTTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAACCACAGGCACACGCCACCATGCCTGGCAATTTTTGTATTTTTGTATTTTTTTGGTAGAGACAGGGTTTCGCCATGTTGGCCAGGCTGGTCTAGAACTCCTCAGCTCAAGTAATCTACCTGCCTCAGCCTTGCAAAGTGCTAGTATTACAGGCCACCACCCCGGCCTATATATATCATTCATTAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACACATAGATAGATACATAGATAGATACATAGATATATACATAGATAGATAGATAGCCTATATATTATCATTCATAGATAGAGATTTACATACTACATCTCTCTATACAATGTATATTATCTTTCTCTATATATATGTAGAGAGATATAGATATATAAAACTTTGCTTTTTTTTCTTAAAGTCATCCGTTGGCTGTCTTTCCAAGTCAATACATACAGATCTTACTCATACAGATATAACTACAGATATAACTCATTTCTGGTAATAGCTACGTCTTATTCTACCAAATACCATGATTTATTCAACTGATTGTCTGTTGATGCACATTTGGATTAAGAGTTTTCATTAGTGAAAGCCAGGGGCTTGTTGTATTTGTTAATCAGATTTTATTGGCACAGAGCCATGCCCTGTTATTTATGTATCACCTATGGCTGCTTTCACTTTGCACCAACAGAGCTGAGTAGTTGTGACAGAATATGGCTTGAAACGCTGAAAATATTTACATCTATGGAAAAGTTTGCCAACCCCTGGTTTAAACAGCATTGTGGTGAATACTTTTTTACATATGTATTTGTACAAGTATTTCTGAAGCCTAAGTTTCAAGTAGAGGAAAAGCCAGGTCAGAGTTGTAGATCCTACCAAATTGCCCTCCTAGGGGGTGTACTTTTGCATGCTTTGCCTCTAACATCTGAGATTTTTTATTTCCCACATACTCGGGAGCATTGGATGTTATTTTTTAAAATCATTGCCTATCTAATAGGAGGAAGTTAGTTTTTAATTCTTCTAATTTATATTTCTTCTTTTTTTTTTTTTTCTTTGAGACGGAGTCTCACTCTGTCACCCAGGATGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAACTCCACCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAACTGGGACTACAGGCGCCCACCACCACGCCCAGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCTGCCTGCTTCAACCTCCCAAAGTTCTGGGATTACAGGCATGAGCCACTGCGCCCAGCCTATATTTCTTTAGTTAATAATGTGATAGAAAAATTTTTATATGTTAATTTTCCAATAATGTTTATTCTATAAAATTATTGTTTTAGTTTCATTTCTCTAATTGTTATTTTCTTTTTCTTATGATTCATAGGAGCTGTATTTATATTAGAAGTGTGGGAGTATGCAAGGCCTTACTTTTCTGCCTTACAATAGATGCTCCACAGATGAAAAAAATATATACCTGGCAGTAGCAGCAGGGTGTGAATAAAAGAGGATACCGGGCCGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGAGAGGCTGAGGCAGGTCAATCACCTGAGGTCAGGAGTTCGAGACCAGCTTGGCCCACATGGTGAAACTCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCAGGCGTGGTGGCGCATGCCTGTAATCCCAGCTACTCAGGAGACTGAGGCAGGAGAATTGCTTGAAACGGGAGGCGGAGGTTGCAGTGAGCTGAGATCGTGCCATTGCACTCCAGCCTGGGTAACAAGAGTGAAACTCTGCCTCAAAAAAAAAAAAGAGGATACTAGTTAAAAACTGTTCTTCGCCAGGTGCAGTGGCTCACGCCTGTAATCTCAACACTTTGGGAGGCCAGGCAGGCAGATCACTAATGGCCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAACACAAAAATTAGCCAGGTGTGGTGACACATGCCTCTAATCCCAGCTACTTAGGAGGCTGAGGCAAGAGAATCACTTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTCTGCCACGGCACTCCAGCCTGGGCAACAGAGTGAGACTCTATCTCAACAAAACAAAATCTGTTCTTGACTCTGTCTGGGACCTGATTGATATATCCCAGTATGTTTCTATCTGTATTACTGGCTCATTTCATTCTTCCTTCCCCTCATGGCTAAATCAGTGTATTTATTTGATTTAATTCGCATGCTGTCAAACTCCTAGTATGTGCTAGGCACGTTGGAAATTCAAATTAAAGAAACAAAACATACTTCCTGCCCTTCAAGAGAGTGAAGTGTAGTGTGGGGAGCAGACATGCAAGTCAGCAATCACT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_613:HG3_10X_allpass_145:HG2_10X_allpass_118:HG3_Ill_Krunchall_1002:HG2_Ill_Krunchall_970:HG2_PB_assemblyticsPBcR_1119:HG3_PB_assemblyticsfalcon_1098:HG2_Ill_tnscope_82:HG3_PB_pbsv_803:HG3_PB_SVrefine2PBcRDovetail_454:HG3_PB_SVrefine2Falcon1Dovetail_466:HG3_Ill_MetaSV_202:HG2_PB_pbsv_787:HG2_PB_SVrefine2PBcRplusDovetail_522:HG2_PB_SVrefine2PB10Xhap12_646:HG2_Ill_breakscan11_100:HG2_Ill_SpiralSDKrefine_687:HG2_Ill_MetaSV_220;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_613:HG3_PB_pbsv_803:HG3_PB_SVrefine2PBcRDovetail_454:HG3_PB_SVrefine2Falcon1Dovetail_466:HG3_Ill_MetaSV_202:HG2_PB_pbsv_787:HG2_PB_SVrefine2PBcRplusDovetail_522:HG2_PB_SVrefine2PB10Xhap12_646:HG2_Ill_breakscan11_100:HG2_Ill_SpiralSDKrefine_687:HG2_Ill_MetaSV_220;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0128839;ClusterMaxSizeDiff=0.0128839;ClusterMaxEditDist=0.0128839;PBcalls=8;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-3357;DistBack=78590;DistForward=-3357;DistMin=-3357;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:116229484-116232843;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:59:62:0|1:42:0:1:33:0|1:54:0:1:27:0/1:74:12:0/1:246:108:3289:.:.
chr1	116912032	HG3_Ill_Krunchall_1008	GAAAAAAAAAAAGAAAGAAAGAAATGGCTCGGCTGCGCTCCATTCTGGGGCGATAGAGCGAGACTCCGTCTCAAAACAAAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_615:HG3_PB_pbsv_808:HG3_Ill_scalpel_769:HG3_Ill_Krunchall_1008:HG3_Ill_GATKHC_1230:HG3_Ill_GATKHCSBGrefine_495:HG3_Ill_250bpfermikitraw_969:HG3_Ill_150bpfermikitraw_919:HG2_Ill_scalpel_704:HG2_Ill_manta_204:HG2_Ill_SpiralSDKrefine_694:HG2_Ill_Krunchall_978:HG2_Ill_GATKHC_1172:HG2_Ill_GATKHCSBGrefine_490:HG2_Ill_250bpfermikitraw_975:HG2_Ill_150bpfermikitraw_881:HG2_10X_allpass_119:HG2_PB_pbsv_791:HG3_PB_HySA_1176:HG2_PB_SVrefine2PBcRplusDovetail_525:HG2_PB_SVrefine2Falcon1plusDovetail_537;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_119:HG2_Ill_150bpfermikitraw_881:HG2_Ill_250bpfermikitraw_975:HG2_Ill_GATKHCSBGrefine_490:HG2_Ill_GATKHC_1172:HG2_Ill_Krunchall_978:HG2_Ill_SpiralSDKrefine_694:HG2_Ill_manta_204:HG2_Ill_scalpel_704:HG3_Ill_150bpfermikitraw_919:HG3_Ill_250bpfermikitraw_969:HG3_Ill_GATKHCSBGrefine_495:HG3_Ill_GATKHC_1230:HG3_Ill_Krunchall_1008:HG3_Ill_scalpel_769;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0372671;ClusterMaxSizeDiff=0.0372671;ClusterMaxEditDist=0.0377358;PBcalls=5;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-81;DistBack=2703;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=80;REFWIDENED=1:116911984-116912144;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:48:0|1:37:3:0:43:0|1:26:0:0:10:0/1:21:11:./.:.:.:.:.:.
chr1	118091036	HG2_10X_allpass_120	TAAGACACCCAGAAGCCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_1190:HG4_PB_HySA_1168:HG3_Ill_Krunchall_1016:HG2_Ill_Krunchall_987:HG4_PB_assemblyticsfalcon_1105:HG3_PB_assemblyticsfalcon_1116:HG2_PB_assemblyticsfalcon_1150:HG2_PB_assemblyticsPBcR_1135:HG2_PB_pbsv_796:HG4_Ill_MetaSV_226:HG3_Ill_MetaSV_203:HG2_PB_HySA_1510:HG2_Ill_MetaSV_221:HG4_PB_pbsv_796:HG4_PB_SVrefine2PBcRDovetail_440:HG4_PB_SVrefine2Falcon1Dovetail_512:HG4_Ill_svaba_917:HG4_Ill_scalpel_683:HG4_Ill_manta_182:HG4_Ill_SVrefine2DISCOVARDovetail_563:HG4_Ill_GATKHCSBGrefine_522:HG4_10X_allpass_120:HG3_PB_pbsv_812:HG3_PB_SVrefine2Falcon1Dovetail_472:HG3_Ill_svaba_947:HG3_Ill_scalpel_776:HG3_Ill_manta_156:HG3_Ill_SVrefine2DISCOVARDovetail_496:HG3_Ill_GATKHCSBGrefine_496:HG3_10X_allpass_146:HG2_PB_SVrefine2PBcRplusDovetail_528:HG2_PB_SVrefine2PB10Xhap12_654:HG2_PB_SVrefine2Falcon1plusDovetail_542:HG2_Ill_svaba_916:HG2_Ill_scalpel_707:HG2_Ill_manta_206:HG2_Ill_SpiralSDKrefine_702:HG2_Ill_SVrefine2DISCOVARplusDovetail_628:HG2_Ill_GATKHCSBGrefine_493:HG2_10X_allpass_120:HG2_10X_SVrefine210Xhap12_618:HG2_Ill_breakscan11_101;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_618:HG2_10X_allpass_120:HG2_Ill_GATKHCSBGrefine_493:HG2_Ill_SVrefine2DISCOVARplusDovetail_628:HG2_Ill_SpiralSDKrefine_702:HG2_Ill_manta_206:HG2_Ill_scalpel_707:HG2_Ill_svaba_916:HG2_PB_SVrefine2Falcon1plusDovetail_542:HG2_PB_SVrefine2PB10Xhap12_654:HG2_PB_SVrefine2PBcRplusDovetail_528:HG3_10X_allpass_146:HG3_Ill_GATKHCSBGrefine_496:HG3_Ill_SVrefine2DISCOVARDovetail_496:HG3_Ill_manta_156:HG3_Ill_scalpel_776:HG3_Ill_svaba_947:HG3_PB_SVrefine2Falcon1Dovetail_472:HG3_PB_pbsv_812:HG4_10X_allpass_120:HG4_Ill_GATKHCSBGrefine_522:HG4_Ill_SVrefine2DISCOVARDovetail_563:HG4_Ill_manta_182:HG4_Ill_scalpel_683:HG4_Ill_svaba_917:HG4_PB_SVrefine2Falcon1Dovetail_512:HG4_PB_SVrefine2PBcRDovetail_440:HG4_PB_pbsv_796;NumExactMatchSVs=28;ClusterMaxShiftDist=0.138249;ClusterMaxSizeDiff=0.138249;ClusterMaxEditDist=0.138249;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-222;DistBack=102529;DistForward=93461;DistMin=93461;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:118091037-118091273;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:1:23:0:24:1/1:0:14:0:33:1/1:0:38:./.:.:.:.:.:.
chr1	118594213	HG2_PB_SVrefine2Falcon1plusDovetail_543	GTAATACTATGTATACATATATTACATTATGTACATACTGCATTATGTATTATGTATGTGTATATACACAAAATACATAATATATAATAGTATTATATAATAGTATGTATAGTTATAATATATAGTATAATTACAATATATGATATGGTTTATATATTATATATAGTATAATATAATATAACATAATACTATTATAATATATAAACTATATAATATATACTATTATAATATATGAACTATTATAATATATAAACTATATATAATATATAATATGTACTATTATAATATATAAACTATTATAATATAATATATAAACTATTATAATACATAAACTATTATAATATATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_620:HG3_PB_pbsv_813:HG2_PB_pbsv_797:HG4_Ill_manta_183:HG4_Ill_GATKHCSBGrefine_523:HG4_10X_allpass_121:HG3_Ill_GATKHCSBGrefine_497:HG2_Ill_MetaSV_222:HG2_Ill_GATKHCSBGrefine_494:HG4_PB_pbsv_797:HG4_PB_SVrefine2Falcon1Dovetail_513:HG4_Ill_SVrefine2DISCOVARDovetail_566:HG2_PB_SVrefine2PB10Xhap12_655:HG2_PB_SVrefine2Falcon1plusDovetail_543:HG2_Ill_SVrefine2DISCOVARplusDovetail_630;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_620:HG4_PB_SVrefine2Falcon1Dovetail_513:HG4_Ill_SVrefine2DISCOVARDovetail_566:HG2_PB_SVrefine2PB10Xhap12_655:HG2_PB_SVrefine2Falcon1plusDovetail_543:HG2_Ill_SVrefine2DISCOVARplusDovetail_630;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0174419;ClusterMaxSizeDiff=0.0174419;ClusterMaxEditDist=0.0319767;PBcalls=6;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-346;DistBack=-469;DistForward=-321;DistMin=-469;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=247;REFWIDENED=1:118594214-118594806;PctSeqSimilarity=0.9794;PctSizeSimilarity=0.9913;PctRecOverlap=0.438;SizeDiff=3;StartDistance=-195;EndDistance=-192;GTMatch=0;TruScore=80;MatchId=165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:0|1:34:2:0:21:0/0:31:1:62:1:0/0:62:2:0/0:53:2:.:.:.
chr1	119274213	HG2_Ill_manta_207	ATAATATTAAATATAATTTAATATTATACTTATAATATTAAATTATATTAAATATAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_817:HG3_PB_HySA_1208:HG3_Ill_svaba_959:HG3_Ill_scalpel_784:HG3_Ill_manta_157:HG3_Ill_Krunchall_1026:HG3_Ill_GATKHC_1252:HG3_Ill_GATKHCSBGrefine_499:HG3_Ill_Cortex_168:HG3_Ill_250bpfermikitraw_986:HG3_Ill_150bpfermikitraw_937:HG2_PB_pbsv_802:HG2_Ill_svaba_928:HG2_Ill_scalpel_718:HG2_Ill_manta_207:HG2_Ill_SpiralSDKrefine_710:HG2_Ill_Krunchall_994:HG2_Ill_GATKHC_1193:HG2_Ill_GATKHCSBGrefine_498:HG2_Ill_Cortex_320:HG2_Ill_250bpfermikitraw_991:HG2_Ill_150bpfermikitraw_900;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_900:HG2_Ill_250bpfermikitraw_991:HG2_Ill_Cortex_320:HG2_Ill_GATKHCSBGrefine_498:HG2_Ill_GATKHC_1193:HG2_Ill_Krunchall_994:HG2_Ill_SpiralSDKrefine_710:HG2_Ill_manta_207:HG2_Ill_scalpel_718:HG2_Ill_svaba_928:HG2_PB_pbsv_802:HG3_Ill_150bpfermikitraw_937:HG3_Ill_250bpfermikitraw_986:HG3_Ill_Cortex_168:HG3_Ill_GATKHCSBGrefine_499:HG3_Ill_GATKHC_1252:HG3_Ill_Krunchall_1026:HG3_Ill_manta_157:HG3_Ill_scalpel_784:HG3_Ill_svaba_959;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0526316;PBcalls=3;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=2;DistForward=4673;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:119274212-119274271;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:25:./.:19:10:9:13:0|1:19:0:0:31:0/1:33:27:./.:.:.:.:.:.
chr1	119326978	HG4_Ill_Krunchall_1029	TTTATATATATATATATATGTATATATATATGTGTATATATATATATATATACAC	T	20	PASS	ClusterIDs=HG4_Ill_svaba_928:HG2_CG_vcfBeta_452:HG4_Ill_GATKHC_1175:HG4_Ill_GATKHCSBGrefine_528:HG2_Ill_GATKHC_1194:HG2_Ill_GATKHCSBGrefine_499:HG4_Ill_250bpfermikitraw_997:HG4_Ill_150bpfermikitraw_948:HG4_Ill_svaba_929:HG2_Ill_manta_208:HG2_Ill_SpiralSDKrefine_711:HG4_Ill_scalpel_691:HG4_Ill_Krunchall_1029:HG4_Ill_250bpfermikitraw_996:HG4_Ill_150bpfermikitraw_947:HG2_Ill_svaba_929:HG2_Ill_scalpel_719:HG2_Ill_Krunchall_996:HG2_Ill_250bpfermikitraw_992;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_992:HG2_Ill_Krunchall_996:HG2_Ill_scalpel_719:HG2_Ill_svaba_929:HG4_Ill_150bpfermikitraw_947:HG4_Ill_250bpfermikitraw_996:HG4_Ill_Krunchall_1029:HG4_Ill_scalpel_691:HG4_Ill_svaba_929;NumExactMatchSVs=9;ClusterMaxShiftDist=0.269231;ClusterMaxSizeDiff=0.269231;ClusterMaxEditDist=0.307692;PBcalls=0;Illcalls=18;TenXcalls=0;CGcalls=1;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=43287;DistForward=-27;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:119326977-119327033;PctSeqSimilarity=0.9839;PctSizeSimilarity=1;PctRecOverlap=0.7818;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=92;MatchId=167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:0|1:27:8:5:26:./.:0:17:12:1:0/1:10:19:./.:.:.:.:.:.
chr1	119558771	HG4_PB_pbsv_804	ACAGTAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGCGCGCCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_623:HG2_10X_allpass_121:HG4_Ill_Krunchall_1031:HG2_Ill_Krunchall_997:HG2_Ill_breakscan11_102:HG2_PB_PB10Xdip_145:HG2_PB_pbsv_804:HG4_Ill_MetaSV_230:HG2_Ill_tnscope_83:HG2_Ill_MetaSV_225:HG4_PB_pbsv_804:HG4_PB_SVrefine2PBcRDovetail_444:HG4_Ill_manta_184:HG4_Ill_SVrefine2DISCOVARDovetail_569:HG4_Ill_GATKHCSBGrefine_529:HG4_10X_allpass_122:HG2_PB_SVrefine2PBcRplusDovetail_533:HG2_PB_SVrefine2PB10Xhap12_662:HG2_PB_SVrefine2Falcon1plusDovetail_549:HG2_Ill_scalpel_720:HG2_Ill_manta_209:HG2_Ill_SVrefine2DISCOVARplusDovetail_634:HG2_Ill_GATKHCSBGrefine_500;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_623:HG4_PB_pbsv_804:HG4_PB_SVrefine2PBcRDovetail_444:HG4_Ill_manta_184:HG4_Ill_SVrefine2DISCOVARDovetail_569:HG4_Ill_GATKHCSBGrefine_529:HG4_10X_allpass_122:HG2_PB_SVrefine2PBcRplusDovetail_533:HG2_PB_SVrefine2PB10Xhap12_662:HG2_PB_SVrefine2Falcon1plusDovetail_549:HG2_Ill_scalpel_720:HG2_Ill_manta_209:HG2_Ill_SVrefine2DISCOVARplusDovetail_634:HG2_Ill_GATKHCSBGrefine_500;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0743134;ClusterMaxSizeDiff=0.0743134;ClusterMaxEditDist=0.0743134;PBcalls=7;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=-320;DistForward=-312;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=1:119558772-119559101;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:26:0|1:30:0:1:25:1|0:0:31:27:1:0/1:30:20:0/1:17:10:.:.:.
chr1	145092957	HG2_PB_assemblyticsfalcon_1185	CTTTTGCCTTCCAGGAGCACAGTTTCTCAGAAGAAATGTTTTTTCCATGTATATAATCATGTAATTCAAACAGGAGCTGCAGTTTACTTGCAGACCTCCTAAGTGACAGTGTTTGGTCTGGGGGTAGATACGGGCCACAAGTTGCTGGGACTATTCTTTATTCGTCCTCATTACTTAGCTTAGTGTCTGGTATAGAATTAGGCACTCGATAGAATTGTTTAAGAATGAATGGACACAAACCTTTAACTATTGCTTCGTTTGATCTCACTTGTAAAATTTCTGCAACTGTGTGACTGCTGTAATGGAAAGTCTTATCCTGTTTAGGCAGCTTAATATAAGTTGGTTTAGATATGTGCATTTCACGATTTCTTTGATAAGTTTCAAGAATTTGCTGGCAGCTGTAACTATGACGTTCAAGGCTTATGTTTACTTTTTTTTTTTTTCCTAGTACAACATTTACAAACTCCAAGAATTTTATCCATTTCAGAGGTGGTTGTCAGATTTAGGGCAAAGGACATATGTGGGCTTTATAAATTTTAAAGTTCGGTACAAATGTTTGTTGATACTCTTGTTTAATTAAATGTAAAATAGTTGAGAACCTTCCATGTACTTACTGATCACAGTGTTAACCATTATTACACAGTACTGTATTGCTCCAAGAATCAAAGGGCAGCAGCTCAAAGACAACACTTGGATGTGAATGAGATGAAGCTGATCAAGTCAGAAGGAAAAGGAATTCAGATGCCAGAGCTCCCAAGGTCTGAATAGTGGGCAGTTTCAAGACAACTCTAGTTTTCTCCTGATGGCTGAAATTATTAGCAGCCTAAGATCACTATCCTTTTCCTGGAATCAATGTGTTCGAAGGGTGCCAGAGTCATCTAGTGTGTTTACAAAGGATAAAAGTAAGAGGTGTGAGTATGAATGTTGTTGTTCCAAGAAATAATTGCTCCAGGGTGACTCCATGCTTTTATTAGTTTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGGTTTTTAAGTAACAAACTAACTCAAAGTAGCCTAAGCAGGATAAAGAGGGAATTTGTTATAAAGAAGCAATAGTGTTTGATAGAACCCAATGGCAGGAATGTGTATGGGCCTTGGGAGGAGCCTAGAGTCAGGAACTGAAAAAAGATGTGGATTCTTGCTCCGAATTTGCTTCTCGGCACACACCTGCATTCTTCTCTCTCTGCTTCTCTAATCAACATGGCAGTCTGTATCCTTAGTTAAAATATTTGTAGCATTAATTCCCCATTACTCAAATGACCATCATTTGAGGCTGTGGAGAAGGCATGTCCTTGTTGAGTGGAAGGAAGGGAAATTAGAACAACTTATATCTATGGGCTATTTTAAATGTAAGGTACTATGATTCTACCAACTTAGACTCCCATATACACAAGGATTCACTTCCATTCCACTTTCTGTCTCTGTTAATAGCACAATTTTTTTTGTCTTATTTATTGTAGTCCTTCATCTTTCATGTGGAGTCAATCACTAGGTCTTATTGGGTTTTGGTCTCAAAAGTCTATCATTAAATAATATTACTTTTCTTAGCAGCATAATTCACAATTGCAAAGATGTGGAACCAACCTAAGTGCCTGTCAACTAATGAGTGGATAAAGAAAATGTGATACACACACACACACACACACACACACACACCATGGAATACTACCCAGCCATAAAAAGGAGTGAAATAATGTCTTTTGCAGTAACTTGGATGGAGCTGGAGGCCATTATTCTAAGTGAAGTAACTCAGGAGTGGAAAACCAAAAACCGTATGTTCTCACTTAAGTGTGAGCTAAGCTATGAGTACACAAAGGTATACAGAGTGATATAATGGACTTTAGAGACTTAGAAGGCGGAGGGTGGGAAGGGACCTAGGGTTAAAAAACTACTTATTAAGTAAAATGTACGCAACTCAGGTGATGGGTGCACTAAAATCTCAGCTTTCACCACTATATAATTCATCTATGTAACAAAAACCCACTTGTAACCCAAAAGCTATTGAAATAAGAATCTTTTTAATAAAGAAAATGCCACACAAAAATAATATTGGTTTTCTTCTAATCCTGAAGGCCAATATAAAAGGTAACAAAAGCCTGAGCTCTTTAATTAATGGGTACAAGTTAAGACAGAATCACATCAGGATTTGAAGTTGAACCTGAGCTCAAATCCTGTTCCCATCACTGCTAGCTCTCTGAGGCTTTCCTCTCAACTACAAAGTGGAGATATAATACTAAACAAGCTTACTGGGTTGCTTAACTAATATCTAGAACATACTTAACAGTGTTTCTATTAATGCGAGAACTAACTGTAAGCACTTAGTAAAGAGTAGTCATTATTAAGCAATGATAAATAAAAGCATTTGTATAATTCTTTTTTTAGCTTTTGAAAGCCTTGCACCTAGATTTTCTCATCTAATATTCATTAAAACCCTGAAAGGCCGATCATATCCCCACTTTAGAGATGGGGACACCAAAAAACAAAGAGATGGGAACACCTAGATATATCAGAGATCCTAGTTTTTATTTTATTTATTTATTTATTTATTTTTTTTTTTTGAGACAGAGTGTCGCTCTGTTGCCCAAGCTGGAGTACAGTGACGCAACCTCGGTTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTGCCTCAGCCTCCCGAGTGAGTAGCTGGGACCACAGGCGTCCGCCACCGCGCCCGGCTAATTTTTTTGTGTTTTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCATAGTGCTTGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGATCCTAGCTTTTTGTAGGTGACTGACCTAGGTGGTACAAGATGTCCTGTACTTGTTCATTTATTCACACATACAACACATATTTATTGACTTCTTACCATAAACTGTTTAAGGAGCCTGGTGGGGATACCGCATAAACAAACAAGCAAAAATAGACAAAAATCTTTGTCTAGAAATATATAAATATAGAACATTTTATAGAATATATGACATAGAAAACAGAAAAAAATAAATATGAAAATAGCCTAATTTTCAGGGTTTTCCTTTTTTTACATACCCTTCATGGTTAACGGTTAGTGGTTAATGGGGATTACCCATTAACTCCCACCCTCCTTCCCAGCTCTCTCCCAAGACTTAGTTTCAGGAACTAGAAAATTCTGATTCAGCTTGGGTGCAATGGCCGCTCAAAGGGCGAGGCTTATTCGAAGCCTCAAATTCAGAAAACCCAGCCAGACCTTGGAAGTTAAGAAGGTGGAAGGCAGATCGCGGAACCAGTGTTCTGATAGTTGTGGTTCTCTGAGGGAAGCCAATTCTGGGGACCGGTAGTGGAAAGCTCTTGCGCTGTTTCCGGCCACCTCAGCGGGAAGCGGAGACGCAAGCAGCTGGATCTCCGGTAACTGAGACATAGGGTATAACTGTTGTCGCGGCGGAGGAAGTGAGGACGGCGCCAAGGGCCTTCCGGGCCAGTGTTGGATCCCTGTAGTTTGTGAAGATGGTGTTGCTAACAATGATCGCCCGAGTGGCGGACGGGCTCCCGCTGGCCGCCTCGATGCAGGAGGACGAACAGGTGAGCTGCTTACTCACGACCCGCGACCCCAAGTCTCTGTCAGCGCGCTTTGCCCTCAGCATCGGATTCCTTCCTAGGACCGGGAGACCTTTGTGACTTCCCGGGCACTCCCGACCTCTCTGAAGTGCGCTTTTATCTTTTGGTGTAGGAGAGACTACCGGCGAAGAGGAAATCTTTCCTGAAGGAGGAGTTAAGTTTTTTGTGTTAGCTGTTTCTCTTTAGAAAAACGCTCTGGAGAAGTGGTAGCTTTGGTTGATTGTGATCACCCAGTGTTCTTTGACTCTTTAGGGACTTTGTTAAAATTCAGGATTTCTAATTTTCTGCTGCTAATAGGACTGCTGATGGATAAATCCTGGGAAAAAATCAGCCAAGTTCTTCAAGTCTATAACGTGGCACCTGATCCTTGACCTAGCTTGCTGACATCTTTTGAAAGTGGGTGAGGTAATATTGCCACATAAAAGCACCTGTT	A	20	PASS	ClusterIDs=HG3_Ill_Krunchall_1067:HG3_Ill_GATKHCSBGrefine_515:HG2_Ill_GATKHCSBGrefine_520:HG4_PB_pbsv_823:HG4_PB_SVrefine2PBcRDovetail_461:HG3_PB_SVrefine2PBcRDovetail_475:HG3_PB_SVrefine2Falcon1Dovetail_480:HG2_PB_assemblyticsfalcon_1185:HG2_PB_SVrefine2PB10Xhap12_672:HG2_PB_SVrefine2Falcon1plusDovetail_563:HG2_PB_assemblyticsPBcR_1168:HG3_PB_assemblyticsfalcon_1146:HG4_Ill_Krunchall_1080:HG3_Ill_Krunchall_1070:HG2_PB_pbsv_827:HG4_Ill_Krunchall_1079:HG3_Ill_Krunchall_1069:HG2_Ill_Krunchall_1036:HG4_PB_SVrefine2PBcRDovetail_460:HG3_PB_pbsv_836:HG3_PB_SVrefine2PBcRDovetail_474:HG2_PB_SVrefine2PBcRplusDovetail_556:HG4_Ill_MetaSV_239:HG3_Ill_MetaSV_212:HG4_Ill_Krunchall_1078:HG3_Ill_Krunchall_1068:HG4_Ill_Krunchall_1077:HG2_Ill_Krunchall_1035:HG2_Ill_Krunchall_1034:HG4_Ill_Krunchall_1076;NumClusterSVs=30;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_563:HG2_PB_SVrefine2PB10Xhap12_672:HG2_PB_assemblyticsfalcon_1185:HG3_PB_SVrefine2Falcon1Dovetail_480:HG3_PB_SVrefine2PBcRDovetail_475:HG4_PB_SVrefine2PBcRDovetail_461;NumExactMatchSVs=6;ClusterMaxShiftDist=0.193666;ClusterMaxSizeDiff=0.193666;ClusterMaxEditDist=0.193666;PBcalls=14;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-4133;DistBack=-4126;DistForward=-4039;DistMin=-4126;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:145092957-145097090;PctSeqSimilarity=0.9754;PctSizeSimilarity=0.9995;PctRecOverlap=0.9973;SizeDiff=-2;StartDistance=11;EndDistance=9;GTMatch=0;TruScore=99;MatchId=169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:82:212:./.:41:84:42:31:1|0:2:112:113:0:0/1:114:41:./.:589:589:4699:.:.
chr1	146705019	HG2_10X_SVrefine210Xhap12_635	TGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_635:HG4_PB_SVrefine2PBcRDovetail_472;NumClusterSVs=2;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_635:HG4_PB_SVrefine2PBcRDovetail_472;NumExactMatchSVs=2;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=1;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-98;DistBack=-2;DistForward=65563;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=176;REFWIDENED=1:146704893-146705166;PctSeqSimilarity=0.7959;PctSizeSimilarity=0.5;PctRecOverlap=0.0202;SizeDiff=49;StartDistance=48;EndDistance=97;GTMatch=1;TruScore=43;MatchId=170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:17:47:./.:10:44:0:0:./.:1:0:0:0:0/0:22:1:./.:.:.:.:.:.
chr1	147392583	HG3_Ill_svaba_985	ATATAGATATATATATAGATATATAGATATATATATAGATCTATATATAGATCTCTATATATATCTATATATAGATCTATATATATAGATCTC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_845:HG4_Ill_GATKHC_1228:HG4_Ill_GATKHCSBGrefine_553:HG3_Ill_GATKHC_1310:HG3_Ill_GATKHCSBGrefine_521:HG2_Ill_GATKHC_1251:HG2_Ill_GATKHCSBGrefine_525:HG4_Ill_manta_188:HG3_Ill_manta_162:HG2_Ill_manta_217:HG2_Ill_SpiralSDKrefine_757:HG4_PB_pbsv_835:HG4_Ill_svaba_958:HG4_Ill_Krunchall_1095:HG4_Ill_250bpfermikitraw_1038:HG4_Ill_150bpfermikitraw_985:HG4_10X_allpass_129:HG3_Ill_svaba_985:HG3_Ill_Krunchall_1083:HG3_Ill_250bpfermikitraw_1027:HG3_Ill_150bpfermikitraw_974:HG3_10X_allpass_151:HG2_Ill_svaba_960:HG2_Ill_Krunchall_1050:HG2_Ill_250bpfermikitraw_1036:HG2_PB_pbsv_837;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1036:HG2_Ill_Krunchall_1050:HG2_Ill_svaba_960:HG3_10X_allpass_151:HG3_Ill_150bpfermikitraw_974:HG3_Ill_250bpfermikitraw_1027:HG3_Ill_Krunchall_1083:HG3_Ill_svaba_985:HG4_10X_allpass_129:HG4_Ill_150bpfermikitraw_985:HG4_Ill_250bpfermikitraw_1038:HG4_Ill_Krunchall_1095:HG4_Ill_svaba_958;NumExactMatchSVs=13;ClusterMaxShiftDist=0.113636;ClusterMaxSizeDiff=0.113636;ClusterMaxEditDist=0.21229;PBcalls=3;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-92;DistBack=23;DistForward=-67;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=64;REFWIDENED=1:147392541-147392696;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:39:0|1:38:1:0:31:1|0:1:20:13:1:0/1:27:25:./.:.:.:.:.:.
chr1	150037842	HG3_Ill_SVrefine2DISCOVARDovetail_520	TCAAAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_45:HG3_Ill_Spiral_835:HG3_PB_pbsv_861:HG2_PB_pbsv_847:HG2_Ill_breakscan11_104:HG4_PB_pbsv_850:HG4_PB_assemblyticsfalcon_1152:HG4_PB_SVrefine2PBcRDovetail_477:HG4_Ill_svaba_968:HG4_Ill_scalpel_725:HG4_Ill_manta_192:HG4_Ill_SVrefine2DISCOVARDovetail_584:HG4_Ill_Krunchall_1108:HG4_Ill_GATKHC_1253:HG4_Ill_GATKHCSBGrefine_564:HG4_Ill_250bpfermikitraw_1050:HG4_Ill_150bpfermikitraw_994:HG4_CG_vcfBeta_519:HG4_10X_allpass_133:HG3_PB_assemblyticsfalcon_1156:HG3_PB_SVrefine2PBcRDovetail_500:HG3_Ill_svaba_995:HG3_Ill_scalpel_814:HG3_Ill_manta_166:HG3_Ill_SVrefine2DISCOVARDovetail_520:HG3_Ill_Krunchall_1093:HG3_Ill_GATKHC_1333:HG3_Ill_GATKHCSBGrefine_530:HG3_Ill_250bpfermikitraw_1040:HG3_Ill_150bpfermikitraw_981:HG3_CG_vcfBeta_440:HG3_10X_allpass_154:HG2_PB_SVrefine2PB10Xhap12_695:HG2_PB_SVrefine2Falcon2Bionano_137:HG2_PB_SVrefine2Falcon1plusDovetail_578:HG2_Ill_svaba_969:HG2_Ill_scalpel_747:HG2_Ill_manta_221:HG2_Ill_SpiralSDKrefine_771:HG2_Ill_SVrefine2DISCOVARplusDovetail_651:HG2_Ill_Krunchall_1062:HG2_Ill_GATKHC_1273:HG2_Ill_GATKHCSBGrefine_534:HG2_Ill_250bpfermikitraw_1050:HG2_Ill_150bpfermikitraw_943:HG2_CG_vcfBeta_469:HG2_10X_SVrefine210Xhap12_642:HG4_Ill_Spiral_67;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_642:HG2_CG_vcfBeta_469:HG2_Ill_150bpfermikitraw_943:HG2_Ill_250bpfermikitraw_1050:HG2_Ill_GATKHCSBGrefine_534:HG2_Ill_GATKHC_1273:HG2_Ill_Krunchall_1062:HG2_Ill_SVrefine2DISCOVARplusDovetail_651:HG2_Ill_SpiralSDKrefine_771:HG2_Ill_manta_221:HG2_Ill_scalpel_747:HG2_Ill_svaba_969:HG2_PB_SVrefine2Falcon1plusDovetail_578:HG2_PB_SVrefine2Falcon2Bionano_137:HG2_PB_SVrefine2PB10Xhap12_695:HG3_10X_allpass_154:HG3_CG_vcfBeta_440:HG3_Ill_150bpfermikitraw_981:HG3_Ill_250bpfermikitraw_1040:HG3_Ill_GATKHCSBGrefine_530:HG3_Ill_GATKHC_1333:HG3_Ill_Krunchall_1093:HG3_Ill_SVrefine2DISCOVARDovetail_520:HG3_Ill_manta_166:HG3_Ill_scalpel_814:HG3_Ill_svaba_995:HG3_PB_SVrefine2PBcRDovetail_500:HG3_PB_assemblyticsfalcon_1156:HG4_10X_allpass_133:HG4_CG_vcfBeta_519:HG4_Ill_150bpfermikitraw_994:HG4_Ill_250bpfermikitraw_1050:HG4_Ill_GATKHCSBGrefine_564:HG4_Ill_GATKHC_1253:HG4_Ill_Krunchall_1108:HG4_Ill_SVrefine2DISCOVARDovetail_584:HG4_Ill_manta_192:HG4_Ill_scalpel_725:HG4_Ill_svaba_968:HG4_PB_SVrefine2PBcRDovetail_477:HG4_PB_assemblyticsfalcon_1152:HG4_PB_pbsv_850;NumExactMatchSVs=42;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0350877;PBcalls=10;Illcalls=32;TenXcalls=3;CGcalls=3;PBexactcalls=8;Illexactcalls=28;TenXexactcalls=3;CGexactcalls=3;HG2count=18;HG3count=15;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-56;DistBack=54590;DistForward=-47;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=1:150037843-150037908;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:50:1/1:0:22:2:8:1/1:0:24:0:15:1/1:0:64:./.:.:.:.:.:.
chr1	150339831	HG3_Ill_250bpfermikitraw_1042	TACTCTGAGTTTGGTTTCTAAGTCAGCTTTAGGAAAAATTGTGAAGCAGGTATCTTTGG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_46:HG3_Ill_Spiral_836:HG4_PB_pbsv_851:HG3_PB_pbsv_864:HG2_PB_pbsv_848:HG4_PB_HySA_1231:HG2_PB_HySA_1579:HG4_PB_SVrefine2PBcRDovetail_478:HG4_Ill_svaba_969:HG4_Ill_scalpel_726:HG4_Ill_manta_193:HG4_Ill_SVrefine2DISCOVARDovetail_586:HG4_Ill_Krunchall_1109:HG4_Ill_GATKHCSBGrefine_565:HG4_Ill_250bpfermikitraw_1051:HG4_Ill_150bpfermikitraw_995:HG3_PB_HySA_1255:HG3_Ill_svaba_997:HG3_Ill_manta_168:HG3_Ill_SVrefine2DISCOVARDovetail_522:HG3_Ill_Krunchall_1095:HG3_Ill_GATKHCSBGrefine_532:HG3_Ill_250bpfermikitraw_1042:HG3_Ill_150bpfermikitraw_983:HG2_PB_assemblyticsfalcon_1199:HG2_PB_SVrefine2PBcRplusDovetail_580:HG2_PB_SVrefine2PB10Xhap12_696:HG2_PB_SVrefine2Falcon2Bionano_138:HG2_Ill_svaba_970:HG2_Ill_scalpel_748:HG2_Ill_manta_222:HG2_Ill_SpiralSDKrefine_772:HG2_Ill_SVrefine2DISCOVARplusDovetail_652:HG2_Ill_Krunchall_1063:HG2_Ill_GATKHCSBGrefine_535:HG2_Ill_250bpfermikitraw_1051:HG2_Ill_150bpfermikitraw_944:HG2_10X_SVrefine210Xhap12_643:HG4_Ill_Spiral_68;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_643:HG2_Ill_150bpfermikitraw_944:HG2_Ill_250bpfermikitraw_1051:HG2_Ill_GATKHCSBGrefine_535:HG2_Ill_Krunchall_1063:HG2_Ill_SVrefine2DISCOVARplusDovetail_652:HG2_Ill_SpiralSDKrefine_772:HG2_Ill_manta_222:HG2_Ill_scalpel_748:HG2_Ill_svaba_970:HG2_PB_SVrefine2Falcon2Bionano_138:HG2_PB_SVrefine2PB10Xhap12_696:HG2_PB_SVrefine2PBcRplusDovetail_580:HG2_PB_assemblyticsfalcon_1199:HG3_Ill_150bpfermikitraw_983:HG3_Ill_250bpfermikitraw_1042:HG3_Ill_GATKHCSBGrefine_532:HG3_Ill_Krunchall_1095:HG3_Ill_SVrefine2DISCOVARDovetail_522:HG3_Ill_manta_168:HG3_Ill_svaba_997:HG3_PB_HySA_1255:HG4_Ill_150bpfermikitraw_995:HG4_Ill_250bpfermikitraw_1051:HG4_Ill_GATKHCSBGrefine_565:HG4_Ill_Krunchall_1109:HG4_Ill_SVrefine2DISCOVARDovetail_586:HG4_Ill_manta_193:HG4_Ill_scalpel_726:HG4_Ill_svaba_969:HG4_PB_SVrefine2PBcRDovetail_478;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.0521739;PBcalls=11;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-58;DistBack=36396;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=58;REFWIDENED=1:150339832-150339947;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=173.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:41:./.:2:2:0:2:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr1	151905214	HG3_PB_SVrefine2PBcRDovetail_504	GTGTGTGCATATATATATATATATATATATATATATATATATATATATATACACACACATATATATGTATATATGCTTTTGTGTATATATATACATATATA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_870:HG3_Ill_svaba_1013:HG2_Ill_svaba_987:HG2_Ill_breakscan11_106:HG3_Ill_Krunchall_1114:HG3_PB_HySA_1268:HG4_PB_SVrefine2Falcon1Dovetail_535:HG3_PB_SVrefine2PBcRDovetail_504:HG3_PB_SVrefine2Falcon1Dovetail_500:HG3_Ill_svaba_1012:HG3_Ill_scalpel_829:HG3_Ill_manta_170:HG3_Ill_SVrefine2DISCOVARDovetail_534:HG3_Ill_MetaSV_222:HG3_Ill_Krunchall_1113:HG3_Ill_GATKHC_1349:HG3_Ill_GATKHCSBGrefine_537:HG3_Ill_250bpfermikitraw_1056:HG3_Ill_150bpfermikitraw_996:HG3_10X_allpass_155:HG2_PB_pbsv_855:HG2_Ill_svaba_986:HG2_Ill_scalpel_761:HG2_Ill_MetaSV_238:HG2_Ill_Krunchall_1078:HG2_Ill_GATKHC_1292:HG2_Ill_GATKHCSBGrefine_540:HG2_Ill_250bpfermikitraw_1064:HG2_Ill_150bpfermikitraw_958:HG2_10X_allpass_132:HG2_10X_SVrefine210Xhap12_647;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_647:HG2_10X_allpass_132:HG2_Ill_150bpfermikitraw_958:HG2_Ill_250bpfermikitraw_1064:HG2_Ill_GATKHCSBGrefine_540:HG2_Ill_GATKHC_1292:HG2_Ill_Krunchall_1078:HG2_Ill_MetaSV_238:HG2_Ill_scalpel_761:HG2_Ill_svaba_986:HG2_PB_pbsv_855:HG3_10X_allpass_155:HG3_Ill_150bpfermikitraw_996:HG3_Ill_250bpfermikitraw_1056:HG3_Ill_GATKHCSBGrefine_537:HG3_Ill_GATKHC_1349:HG3_Ill_Krunchall_1113:HG3_Ill_MetaSV_222:HG3_Ill_SVrefine2DISCOVARDovetail_534:HG3_Ill_manta_170:HG3_Ill_scalpel_829:HG3_Ill_svaba_1012:HG3_PB_SVrefine2Falcon1Dovetail_500:HG3_PB_SVrefine2PBcRDovetail_504:HG4_PB_SVrefine2Falcon1Dovetail_535;NumExactMatchSVs=25;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.02;PBcalls=6;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=17;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-100;DistBack=6329;DistForward=-78;DistMin=-78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=25;REFWIDENED=1:151905215-151905339;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:31:0|1:26:0:0:36:0|1:34:0:0:28:0/1:24:12:./.:.:.:.:.:.
chr1	152240472	HG2_Ill_svaba_992	AATATATATACTTTACGTAAAGTATATATATACTTTACGTAAAGTATATATATAC	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_963:HG3_PB_HySA_1275:HG2_PB_assemblyticsfalcon_1222:HG2_PB_PB10Xdip_610:HG3_PB_pbsv_871:HG3_Ill_svaba_1017:HG3_Ill_scalpel_833:HG3_Ill_Krunchall_1119:HG3_Ill_GATKHC_1355:HG3_Ill_GATKHCSBGrefine_538:HG3_Ill_250bpfermikitraw_1063:HG3_Ill_150bpfermikitraw_1002:HG3_10X_allpass_156:HG2_Ill_svaba_992:HG2_Ill_scalpel_766:HG2_Ill_Krunchall_1084:HG2_Ill_GATKHC_1299:HG2_Ill_GATKHCSBGrefine_542:HG2_Ill_250bpfermikitraw_1072:HG2_Ill_150bpfermikitraw_964:HG4_PB_pbsv_862:HG4_Ill_manta_194:HG2_Ill_manta_225:HG4_Ill_svaba_990:HG4_Ill_scalpel_738:HG4_Ill_Krunchall_1129:HG4_Ill_GATKHC_1279:HG4_Ill_GATKHCSBGrefine_573:HG4_Ill_250bpfermikitraw_1067:HG4_Ill_150bpfermikitraw_1015:HG2_PB_pbsv_856:HG2_Ill_svaba_991:HG2_Ill_scalpel_765:HG2_Ill_Krunchall_1083:HG2_Ill_GATKHC_1298:HG2_Ill_GATKHCSBGrefine_541:HG2_Ill_250bpfermikitraw_1071;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_964:HG2_Ill_250bpfermikitraw_1072:HG2_Ill_GATKHCSBGrefine_542:HG2_Ill_GATKHC_1299:HG2_Ill_Krunchall_1084:HG2_Ill_scalpel_766:HG2_Ill_svaba_992:HG2_PB_PB10Xdip_610:HG3_PB_pbsv_871:HG3_Ill_svaba_1017:HG3_Ill_scalpel_833:HG3_Ill_Krunchall_1119:HG3_Ill_GATKHC_1355:HG3_Ill_GATKHCSBGrefine_538:HG3_Ill_250bpfermikitraw_1063:HG3_Ill_150bpfermikitraw_1002:HG3_10X_allpass_156;NumExactMatchSVs=17;ClusterMaxShiftDist=0.036036;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.0900901;PBcalls=6;Illcalls=30;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=28;DistForward=-40;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:152240471-152240541;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=176.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:51:1/1:2:16:0:28:./.:3:5:0:7:1/1:3:44:./.:.:.:.:.:.
chr1	152555543	HG2_PB_SVrefine2PB10Xhap12_706	TCTGAGAGAAGTAACTGGGCTGTGGACTGTGTTCTGAGAAGAACAAGTGGTTGGAGATTTCATAAGAGATGTGTGAGATTAAGGAGTTCCATCCCAAGAAGAAAAAGAATGTCTCCAAATTAGGATATGGAGACAGAAACTCAGAAAGGGACCCAGTGGTGGAGCTAAGAAAAAGCCAGCTACAAGTCAGCTTTCAATTCATGAGGAAAGGTGGACCCTCCTGCTGACAAGTTCTGAAATGCTTTGAGTCACACTGACAGGCGGACATGTGTTATACTCAAAATGAAGTCTTACAGCAATTCAAAGTTGTACATCATTAGGAGTAAATACGGACTCTGTACTTATTTCTGGACAACGACTGTACATGGAAAAGTAATTATTCACTTCTGAAGCTAGGTTTGAACTCCAAGACAAAGACAGTTCTCTCACCCACACTATAATGCCTACATTTTGCCTTTGGGCTCAGTCATCACAGATATAAATACCATATTTGTGTAGTGTCTATCTTCTCTGCTAGGTTGTAAGATCCCTGAAGAAAGTAAATGTGCCCCTTATTCAGTGCTGAAACCCAAGCTGAGCAAGCCACTTACTGGCCTTAGCAGATATTCAGCTTGTGTTTCTCAAATAAAGGATGATGAGAGTCAATTCCAACATGTAAGATTGGTGATGGCATGTCGGAAAGAGAGAGGCTCAGATCAAACTTTGGGCTTGAGAAGAAAAGTTATAGAGTGATGTCTCCAGTGAGGGTTGCAGATCAGGGGTCAGGGTAGACCCAACAGGGCATCTGGGACTCTCTGGGAGCACCCTCTCACTCCTCTCACTCAGGCTGCCCCATTCCTGTTCTCTAGGTTTTAGGTCTGACACCACTGGCATTTTTTCCGATATTTTTTTTCCACTCTCTTGGTTGCTTTTCAGCCTCACCATCCAGTTTGACATAAAAAAGCACATTGCACCTGTTATGGGACAGTCACTAGAAGAGCTAATGGCTGCTCTCAGTGCAGCAGTTAAGCTGAAAATGCAAATACACCTAGAAACCCGGAAGGGAATGAGGATCTTATGTTGAAGACCGAGAGGACTTTTGTATATGGGGTGAGATAAGGGTCCAGTTTCATTCTTCTGCATGTGAATATCTAGTTTTCCCCAAACCATTTATTTAAGAAACTATCCTTTTTCCATTGTGTGTTCTTGGCACCTTTGTCAAAGATCAGTTAACAGGAAGTGTGTGTGTGGGTTAATTTATGGGCTCTCTAGCTCTCTATTCTGTTCCATTGATCTATGTGTCTGTCTTTTTTTTTTCATGCTGTTTTGATTACTGGAGCTTTGTAGTACATTTGAAATCAAGTGGTGTATTACGTCCAGCTTTGTTCTTTTGTCCTTAAGATTGCTTTGGCTATTCAGGGTATTTTGTAGTTCCACATGAATTTTAGGATTTAAAAAAAATTCTATTTTATTTTTCAAGATGGTATATTGGAGGCTTTAGCATGACTCTTCCACTTGGAAATAGCAAAATAATGCATAAAGATCAAAATTATGGCTTTAATTCAAGAACGAAAATGGGAATTCACTGGAAAGCAAAAGACATCACAGTTCCTAAGGAGGCGAAAATGGGCAAACAACCCTTGTTATAGAGTCCAGCTGAAAAGTGAGTGAAGCCCCAATATGTGAGAGGGGCACACATTATGACTTAGCTTTCTAATGGGGATCCATGCAACCCAGGCCAAAGGAGAGCATCATATTTCTCCCATGCCCTGGAGCTAGCTTGAGAAGAGGTTGGGAGACACTGAGAGGGAAAGACACTGGGAAAAGCTGCGGAGATTTTCCCGAACCCAGTACTGAAAGCAGGATGCCATTTTTAATCCAGGCACATACAAAGTCAGCCATTCTCTGATGACTTGGCAGTATGGCTGTGCAGGCATTTTAGTCTTGGGCCAGAGAGTGGAGCACTTACCCTGGAGTAGGGTAGGGGTCTCTACAGCCATAATCTAATGGCAAGTGTGGAAAGTGCCCCACAAGTAGGTGCTGGAACTGTGTTCTCCCCTATCACCGCAGTAGGAGAACTACTGCAGCTGCTGTTTCTTCTGGGTGGTAAGACTTGCAGCCAGGGCCACCTGGTGTGGAGACCCGGAATTAGTCTGTATGTGTCATTCATGGGTGCTCCAGCCTGCTCCCCTGAGACTGTGCTGCAGCAGGGCAATTTCTGCTCCATGCTCCCACAGATCTTCAGACATTCAGGACTCCACTTGTCTGGATCAGCAGCCTGAGCTGCCCCATTCTTCCAGTGCAGATTGTGGTAAAGCAGGGCCCTCTATGCTTTATGCCTAGGCAGATATTCAGGCATCTGGAGCACCCACTCTCCTGGATTAGGAGTTCAAGCTGCCCCCCAACACTTCCATGCAGAGAACTTGGGGCCAAGGAGGTTTCCCAGCTCCAGGCCTAGGCACCCCACTGGGAGCCTTTCTCCCTTGGTGCTGGTGCTTGTGCCTGCCATTGGAGGATCTGTTAGGTGGGCTGCCCAGTGTGGCTCTACCCATCTTTGTATGCCCCCAAGGACTGAGCAGGGAGCTCAAACCACTGAGCACCCCACAGATCAGCCCATTGCCTGAGGCAATTCAGAGCTTCTGTCCGTAAACAAGTATCAAATATATACCTATTTGCATTGACCACTGCTGGCTTTTACTCATAAGCACCATCTACTGGCCTGTAGGTCAAACTGATCAGCCCAAAATAAAACCTGCCAATAGAAGTGCCTAGGGCATAGGGCTACAGAAGTAGTCAAAAGACCCTAGCCAACATTTTCTACAGTCACACCTTCTAGGGAGGAAGGGGGAAGGAAAAAAAAAAAAAGAACAAATCAATAAAATTATAGGGAAATAAATAAAGAAAAAATCTTATCCACATGAAAATATTTACATAGAAGTGCTAGGCTAGCATCACCAGATGAGAAAGAACTAGCACAAGGACTCTGGTACCATGAAAAGTCTGAATGTTGTGACACCTCCAAAAGATCTTCAGCAATGGTCCCTAACCAAAATGAAATCTCAGGAATTACATATAACAAATTCAAAACATGAATTGCAACAAAGCACAATGAGATCGAAGACAAGGTTGAAAATCAACATAAAGAAACTTCTAAAGCAATGCAGAAAATAAAGGAAGAGATAAAAAATCTTAAATCAATCAGAGATTCTGAATTTAAAAACTCACTTAAAGAAATTCAAAATATGATTGAAAGCTTTACCACTAGACTAGACCAAGCAGAAGAAAGAATTTCACTGGTATGAATACCAATCTTTTGAACTAATCCAGTCAGACAAGAATAAAGAAAAAAGAATTTAAAAAACGAACAAAGTCTTTGAGGAAGGATATTCTGTAAAGCAACCAAACCTACAAATTACTGGCATTTCCAAGAAAGAAGGAGAAAGAGTAAACAACCTGGAAAGTATATTTGAGGGAATAACTCAAGGAAATTCCCCTCATCTTGCTAAAGAGGTAGACATTAAGACACAAGAAATATAGAGAATGTGTGCAAGATACTATACAAAACAAACATCACCAAGGCAGATAGTCACCAGACTGTCCAAGATTAATGCTAAAGAAAAAAATCTTAAAGGCAGCTAGAGAAAAAGGTCAGACCACATACAAAGGGAAGCCCATCAGGCTAACTGCAGAGTTCTCAGCAGAAAACATACAAATCAGAAGACATTGGGGGCTCATTTTCAGCATCCTTAAAGAAAAGAAATTCCAACCAAGAATTTAATCCCCTATCAAACTATGCTTCATAAGCAAAGAAGAAATAAAATCTTTTCCAGACCAATGATTACTAAGGGAATTTGTTACCACTAGACTAACCTTACAAGAAATCTTTAAAGGAGTTCTAAACATGGAAACAAAAGAACAATACCTGGTCCACAAAAACACAGTTAAGTACATAGCTTGCAGACCCCATGAAGCAGCTACACAATAGAAACTACAAAGCAGCCAGCTCACAACTTCACAATCAAAACTTCACATATCAATATGTGGGCTTGAGTATAAATGGTCTGCAGGCCCAATTTAAATGGCACAGAATGGCAGGTAGGATGAAAAAGCAAGACTTATCCATCTGATGTCTTCAAGAGACCCATCTCAAATGTAGCGACAATTATAAGCTCAAAGGGGTTGGAAAAGGATCTATCATGCAAATGGAAAACAAAACAAAGTGGGAGTCAATATTCTTAGATAAAATAGACTTTAAATCAACAAAAACTAAGAGAAAAACCAAAGAAGGCAATTACATAAAAATAATGCATTCAATTAAACAATAAGATTTGACTATCCTAAATATATATGCATTCAACATTGGGGCACTCCAGTTCATAAAACAAGTACTTCTAGGTATATGAAAAGAACTTAGCCACACAATGATAGTGAGGACTTCAACACTCCATTGGCAGTGTTAGACACATCATCGAGGCAGAAAACTAACAAATTCTGGACTTAAATTGGACACTTGATGAATTGGGTTAACAAACTTCTACAGAGTACTTCACCCATTAATCACAAAATAAATTCTTCTCACCTGCACATGGAACATACTCCAAGATTAACCACATGCTCAGCCATAAGGTGAGTCTCAATAAATTTAAAAAAATTGAAATCATACAATTTATACTTTTGGACCACAGTGGAATAAAAACAAAAGTCAATACTAAGGAGATGTCTCAAAACCAAACAATTACATGGAAATTAAACAGCTTGTTTCTGGATGAATTTGGGGGAAACAACAAAATTAAGGCAGACATAAAAAATTCTTTGAAATAAATGAAAACAGAGATAAAACATCCAAAAAGTTAACAACCTAACATCACTCCTAGAGGAACTAGGGAAATGAGAAAAATTAACCCAAAGTTAGAAGAAAAGAAATAACTAAAATCAGAGCAAAACTGAATGAAATTAAGATCCAAAACCACACAACTTCCCAAGACTAAATCAGGAAGAAACTGAAAACTTGACCAGACCAACATGGAGCTCCAAAATGGAATTAGTAATTAAGAAACCGTACCAACCAAAAAAAGCCCTAGACCAGATGGATTCATAGCTGAATTCTACCAGAGGTACAAAGAATAGCTGGTACCCATTCTACTAAAACTATTCCAAAAAATTGAGGAGGAAGGACTCCTCCCTAACTCATTCTATGAGTCCAGCATCATTCTGATACTAAAAATCTGGGAAAGATAGAATGAAAAAGAAAAATATAGGTCAATATCTCAGATGAACAGACACAAAAATCCTCAACAAAATACTAGCAAGCTGAATCCAGCAGCACACCAGAAAGTTAATTAACCACAATCGAGTAGGCCTTATTCCTGGCATGTAGGTTTGGTTCAACATATGCAAATCAATATAAGTGATTCACCTCATAAACAGAATTAAAAACAAAAACCTTATGATTGTCTCAATAGTGCAGAAAAATCTTTTGATAAAATCTAACATCCTGTCATAAAAACCCTCCACAAACTAGGCATTGAAGGAACATACCTCAAAATAATAAGAGCCATTTATGACGAACTCACAATCAACATCATACAGAATGTGTAGAATCTGGAAGCATTCCCCTTAAGAACATGAAGACAAATAGGCTCCTTCTCACCACTCCTATTAAATCTAGTAGTGGAAATTCTAGTCAGAGCAATCAGGCAAAAGAAAGAAATAAAAGACATCCAAATAGGAAAAGAGTAAGTCAAATTATCTCTTTTCTCTGATTCTGTACCTAGAAAACCCTAAAGACTCTGCCCTAAGTTTCCTAGAACTGATAAGCAACTTCAGTAAAGTTTCAGGATACAAAATCAACACACAAAAATAAGTAGCACTTCTACTCACCAATTACGTTCAAACTAAGAGCCAAATAAAGAATGCAATCCATTTACAATAGACCCCCAAAAATACCTAGGCATACATCTAACCAAGATGGTGAAAGATCTCTATAAGGAAGACTAAAAATCACTACTGAAAGAAATCGTAGATGACACAAACAAATCGGAAAACATTCCATGCTCTTGGATTGGAAGAATCAATGTCGTTATAATGACCATATCGCCTGAAACAATCTACAGATTCAACACTATTCCTATCAAACTACCAATATAATTTTTCATGGAATTTTGATAAAAACTACTCTATATTCAATATGGAACCAAAAATGAGCCAAAATAGCCAAGGCAATTCTAAGCAAAAAGAACAAATTTGGAAGCATCATATTACCCAACTTAAACCATACTGTAAGGCCACTAACCAAAACAGCATGGTACTGGTACAAAAACAGACATATAGACCAAAAGAACAGACAGATTACCTAGAAATAAAGCAATACCTCTATAGCCAGCTGATTTTTGACAAAGTCAACAAAAATAAGCAATAGGGAAAGGATTCCCTATTCAATAAATTATGCTGGGATAACTGGCTATCCATATGTGGAAGAATGAATCTGGACCCCTACCATTCATCATATACAAAAATTAACTCAAGGTGAATTAAAAATGTAAATGTAAGACCTCAAACTATAAAAATTCTGGAAGAAAGCCAAAGAAATACAATTCTGAACATCAGCCTTGGCAAAGAATTTATGATTAAGTCCCCAAAGGCAATTGCAACAACAAGAAAAGTCAAGTGGGACCTAATTAAACTAAAGAGCTTCTGCACAGCAAATGAAACCATCGCAGAGTAAACAGACAACCTACAGAATAGGAGAAAATATTCATAAACTATGCATACAACACAGTTCTAATATCCAGAATCTTTAAGGAATTTAAACAATTCGACAGGCAAAAAAACCCCACAAATAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGGCATATAAGCGGCCAATAAACATACTCAATATCACTAATCATCAGAGAAATGCAAATCAAAACCACATGAGATACTGTCTCACACCAGTTAGAATGGCTATTATTAAAAAGTCAAAAAATAACAGATATTGGCAAGGTTGTGCAGAAAAGGAAATGCTTGTACACTGCTGGTGGGAATGTAAATTAGTTCAGCCACTGTGGAAAGCGGTTTGGAGATTTCTCAGAGAACTTAAAACAGAAATGCTATTCGACCTGGCAATCTCATTACTGGGTATATATCCAAAGGAAAATAAACTGTTCTACCAATAATAATAGTAATAATAATAACCTATACACTCTTAAATTCATCACAGCACAATTCACAATAGCAAAGACATGGAATCAGCCTAGATGCCCATCAACAGTGGATTGGAAAATTATAACGTGGTACATATACACCATGGAATATTACACAGCCATAGAAAAGAATGAAATCACGTCTTTTGCAGCAGTGTAGATCCAACTGGATGCCATTATCCTAAGAAAATTAATGCAGGAACAGAAAACCAAATACTTCATGTTCTCACTTATAAGTGGGAGCTAAATACTGGATACACATAAACATAATGATGGCAACAATAGACACTAGACAACTAGAAGGGGAGAGAGGAAAGGATGCAAGGAGTGGAAAACTACTATTGGGTATATGCTCACTACCTGAGTGATGGGATCATTTGTACCCAAACCTTAACATTGTGTAACATACTAATATAAACAATCTGCTCGTGTACACCTGAATCTAAAATAAAAGTTGAAACTGTAAAAACAACATCAAAAAATTCTGTCAGAATGTCATTGGAATTTTGATAGACATTGCAGTAAATCTGTAGATTGCTTTGGGGAATATGGACAATTTATTCATTTATTTATTTTAATGTATATTATTTTTAATTGACAAACTAGAATTGTATTACATTTATTGAGTACAATGTAATGTTTTGACATTTTGTGTAGTGATATATTTGAAATTTGCTCTCTCTATTTTGAACTAAGCCATACATAATTATTGACTGTATTCACTCTCCTGTGCGATAGATCTTAAAACATATCCCTGCTGTCTAGCTAAAAATTTTAAGTTTTTGATTAACAAATCCCCAAGTCCTTTGCTGCCCTCTCCCTCTAGCCTCTGTTAACTACCATTATACTGTCTGCTTCTATGAATTCAGCTATTTTTAGATTCTATAAATAAGTGAGATCATGCATTGTCTTTCCATATCTGGCTTATTTCACTTAGTGTAATGTCCTTTAGGTTCATCCATGTTGTCACAAATGACGGGATTTCCTTATTTTATAAGGCTGAGTAGTAGTCTATTGTGTACGTATACTACATTTTCTTTCTCCATTGATAGACACAGGTTTATTCCATATCTTAGATACTGTAATTAATGCTGTAATAAATATGGGAATGTAGATATCCCTTTGATACAACGATTTCAATGCCTTGGATATATTTTCAGAAGTAAGATTGCTGAATCATATTTTAGTTCTATTTTTAGTTTTTTCAGGAACATCCATATCATTTTGTATAATGTTTATTATAATTTACATTCCCACCAACAGTGTACAAGTGTTCCCTTTTCTCTGCATTCTCACCAACACTTTTCTTTTCTTTTTTTCTTTTTTTAGATATATAAGCCATTCTAACAGGTGTGAGTTGTTATCTTACTGTGGTTTTAATTTGCATTTTCCTGATAATTAGTGATGCTGAGTTTTTTTTTTTTCCTAAACCCGTTGGTCATCCCTAGGTCTTTGTTTGAGAAGTGTCTGTTAAAGTTCTTTCCCCATGTTCAAATTTTTTTTCTTGCTACTGAGTTGAGTTCATTACATATTTTGGATATTAACCCTTTATCAGATATATGGTTTGCAAATTTTTTTTCCACTCTGTGGGTTGTCTGTTCACTTTGTTAATTGGTTCTTTGGCTGTGCAGAAGGTTTTTAGTTTAACTAACAAAAGCAATCCAATTTTTCTATTTTTGCTTTCGTTGCCTGAGCTTTCAGGGTCATATTCAAAAAATTATTGCCCCGAGCAATGTCATGGAGCTTTCCCCCTATGTTTTCTTCTAATAGTTTTAAAGTTTCAGGTATTATGTTTATGTCTTTAATCCATTTTGAGTTTATTTTTGTGTATGCTGCAAAATAAAGGTCTAATTTCACTTTTATGCATGATAACCAGTTTTCCCAGCACTACTTATTGAAGAGACTGTCCTTTACCCATTGTGTGTTCTTGGTACCTTTGTCAAAAGTCAATCGACTGTGAACGCTTAGGTTTATTCCCTGGCTTTCTACTAAATTGTTCCATTTGTCTATGTGTCTGTTTTTATGCAAGCACTGTGCTGTTTTTACTACTGTAGCTTTGTAGTAGATTTCAAAAATAGGTCAGGTGATATCCCCAGCTTTGTTATTTTTGTTCAAGATTGCCTTGAACTGTTTGTGGTCTTTTGTGCTTTCACGTGAATTTAAAGATTATTTTTGGCCTGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGCGATCGAGACCATCGTGGCTAACACGGTGAAACCCCGTCTCTACTAAACATACGAAAAAATTAGCTGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGATGCTGAGGCAGGAGAATGGCGTGAAACCTGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGTTTTTTTTTCTATTTCTGTGAAAATGGCAATGGAATTTTGATGTAAGTTGTATTGCATCTACAGATCACTTCGAGTAATATGAACATTTTAACAATGTTAACTTTTTCAAACCATGAACATATTTTTATATGTGTTTTCTTAAATTTATTTGATTAGTGTTTTAATAGTCTTTAGTATACACGTTTTTCACCTCCTTAGTTAAATTTACACCTAAGTATTTTATTTTCTTTTTTTGCTGATGTAAGTGGGATTGTTTCCTTAGTTTTCTGCTTGGATAACTCATTATTAGTGTATAGAACACTACTTATTTTCATATGTTGATTTTGTGTCCTGCAACTTTACTGAATTTATCAGTTCTAACAAGTTTTTGGTGGACTCTTTAGAATTTTCTTTATATGAGATTATATTGTCAGCAAATAGAAACACTTTCATTAATTCCTTTTGTCTTAGGATTCCTTTTATTTCTTTCTCTTGCCTAGTTGCTCTGGTTAGGACTTCCAGAACTATGTTGTAAAGAATTGTGAGAGTGGGCCTCCTTCTTTTATTCCTAATCTTAGAGAAAAAGCTTTCAACTTTTCATGATTAAGTACGATGTTTGCTATAGGTTTGTCAGATATGGCTTTTATTGTTTTGAGGTACATTTCCTTTATACCTATTCTATTGAGAGTTTTTATCATGAAAGGATATTGAGTTTTGTCATATGCTTTTTCTGCATCTAATGAGTTGATTACATGGTTTTTATTCTTCATTTTATTAGTGGAATGAGTCACATATATTCATTTGTATTTTTTGAACCATCCTCGCAGCCCTGGGTAAATCCCATTTGATCAGGGCAGATGATTCGTTTAACATGCGGTTGCATTTGGTTTGCTAGCAGTTTGGTAAGGATTTTTGCGTTTAGGTTTATCAAAGGCATTGGCCTGCAATTTTCTTTTCTCGGAGTGTCCTTGTCTGGATTTGGTATCAGAGTAATGTTGGTCTTGTAAAATGAGTTTGAAAGTATTCCTTCTTCTTCAATATTTTGGAAGAGTTTCAGAAGGATTGGTATACAATCTTCTTTAAGAGATTGGTAGAATTTATTTCTAAAGCCACCCAGTCCTGGGCGTTTCTTTGATAGGAGACTGTTACTGATTTAATCCCTTATTTATTGCTGATTTAATCCCTTTACTCACTATTGGTCTGTTAAGGTTTTCTATTCATGAGTCAGTTTTGTTAGGTTCTATGTGTTTAGGAATTTATAAATTTCTTCTAGATATCCAATTATCTGGCCTACAGTTGTTATAATCATTTGTATTTCTGTGGCATCAGTTATAATGTGTCCACTTTCATTTCTGATTTTTATTTCTTTGAGCCTTCTTTCTTTTTTTCTTAGTTAGTCTAGCTAAGGTTTGTTGATTTTGTTTATCTTTAAAAAAATAATTATTTGTTTCATTAATTTTTTCTACTGTTTTCCTAGGCTCTATTTTATTTATTTCTGCTTGGATCTTTGTCATTCCTTTCCTTCTCTTAACTTTGGGCTTAGTTTGTTCTTCTTTTTCTAGTTCCTTGAGATGTAACATTACATTGTTTATTTGAGATCTTTTGTCTTTTTGATATAGACATTTATTGTTATTATTTTCCCTCTTAGCACTGCTTTTGCTGCATCCCACAAAATTTGTTTTGTTGTGTTTTCATTTTTGTTTATCTCAAGGCATTTTTTGATTTTCTTTTTTTATTTCTTCTGTGACCCATTGGTTTTTAAGAGCATCTTGCTTGATTTTCACATATTTTAAAATTTTATAAGGTTTCTCCTGTTACAGATTTCTAGTTTGATGTCATTGGTTGGTTGGTATAGTTTTAATCTTCCGAGATTTGTTAAGAATTGTTTTGTGGCCTAACATACAGTCTATTTTAGAGAATATTCTATGTGCTCCTGAGAAGAAAGTATATTCTGTTGCTGTTTGGTGGAATGTTTTGTATGTGTCTGTTAGTTCTCTTTGGTCTGAGGTGTAATTCAAGCCTAGTGTTCCCTTATTAACTTTCTGCTTAGATGAGCTGTCTATTGTTGAAAGTAGAGTATTGAGATTTCCTGTTGTTATGGTATTGCAGTCTATCATTCCCTTCAGAAAATTTAATAATTGCATTGGTATATATGTGCTCTTATGTTGGGTGCATATATATTTACAATTATATTCTTTTGATGGCTTAGCACTTTCTATTGCCGTAAAATGACCTACTCTGTCTTTTTTATAGTTTTTGACTTAAAGTATATTTTATATGCTATAAGTATAGCTACCATGCTCTCTTTGTTTCCATTTTTATGAAGTATCTTTTCCCATCCCTTCATGTTCAGTCTATGTATGTCCTTAGAAGGAAAGTGAGTCTCTTGTAGGCAGCATATGGTTTGATCTTTAAAAAAATCTATTGAGCTCCTCTGTCTTTTGATTAGATAACTTAATCCTGTTACAGTCAAGACAATTTTTGATAGTTTAAACTTACTACCATTATTTTCTTAATTGTTTTCTGGTTGTTTTCTTGATCTTTTGTTTCTTTCTTAATTTCTTGTTCTCTTCCTTTGTGGCTTATAGTTTTCTGTGGTGGTCTTCTTTGATTTTTTTTTATATTTTGTTCTACAGGATTTTGCTTTATGGCTACCATGGGGCTTATATAAAACATCCTAAATTTGAAACAGGCTATTTTAAGCTAATAACTTTAATTACAAACAGAACTGCACATTAATTCCCTCCTTCCCCTTGTATACTTTTGATATTTACCTAGTTTTATAATTTATATCTCTTAATTATTTATTGTAGCTACAGTTATTTTTAATAGTTCTTTTTTTAATCCTCATAGGACAGATAAAATTGTTTTATGCTTCACCCTTACAGTTTTAGAATATTCTGAATATGATTACATAGTCATATTACTTATACCATTGAGATATTTACTTTTGTGTTTTTGTTATTAATTAGCAGATTTTCATTTTAGCTTGAAGAACTCCCTTTAGCAATTCCTATGGAGCAGGCCTAGTGATGATGAATTCCCTTAGCTTTTGTTTGTCTGAGAAAGTTTTTATTTCTGCCTAATTTCTGAAGAGCAGACTTTCCAGGTAATGTATCCTTGGTTAGCACTTTTTTCTTCAGAATTTTGAATATCTCATTCTACTTTCTCATGGCCTGCAGAATTTCTGCCAGGAAAGCTGTTAACAGCTGTATTGGGACTGCTTTGAATGTGATGTTTCTTATCTCTTGGTGTTTTTTTTTTGTCTTGCATTTTTGATAATTTTATTCTAGAATTTTTTGATAATTTTATTCTAGAATTAATGTTTGGGTTGAATTTACTTGGAGACTTATGAGCTTCCTATACCTGAATGCTGTCATCTTTCTTCAGATTTTGAAAATTTTTAGTCATTATTACCTTAAATGTGCTTTCTGGGCCTTTGTCTCTCTCTTCTTCTTCTTCAGAAACTCCTATTATGTGGAGGTTAATTCTCTTAATAGTGTCCCATAATTTCTGTAGGTCTTTTCCATTCTTTTTTCTTTTTACTCCTCTAACTGGATAATTTCAAATATCCTATCTTCAAGTTATTCTTTCTTCCACTTGATCAAGTCTGCTGTTGAAGCTTTCTATTGAATTTTATAGTTCTGTTATTACATACTTTATCTCTAGGATTTCTATTTTTATTGTTTCTATTTATTTGGCAATCTCCTCATTTTGTTTTATAAATTGTTTTCCACATTTAATTTAGTTTTTTATCTGTATTTACTTGTAGTCCCCTATAAGTAATACGACTATGTATCATATTCAGAATATTCTAAAGCTGTAACAGTGAAGTATAAAAAAGCTTTATCTTTCCTGTGAAGATTAAAAAGACACAACTATTAAAAATAACTGTAGGTACAATAAATTATTAACGGATACATTTTACAAAACTAGGTGAATTTTTTTTTTTTTTTTTTGAGATAGAGTCTTGCTCCGTCACCCAGGCTGGAGTGCAGTGGAATGATCTCGGCTCACTGCAACCTCTGTCTCCCAGGCTCAAGCAATTCTCCTGCCTCAACCTCCCAAATAGCTGGGACTACAGGTGCATGCTGCCACACACGACTAATTTTTTGTTTTTTAGTAGAGACGGGGTTTCACCGCGTTTAAGATAATTGTTCTGAATTCTTCATCAGTCATTTTATAAATCTTCACTTCTTCAGGATCCCTTATTGGAGATTTATTAATTTCCTTATGATGATGATGTATTTTTTCAGATTTTTCATAATCCTTGTGTCCTTGCATTGGTGCCCAACCATTTGAGGAAATGGCCAACTATTCCGCCTTTGTTTGTGTTATTTGGCCATGGTATACCTTCACTATTTGATCAAACCTGGAATTCTGATTAAGCAAGTTGGTGGTGACCTTGAACGGGAAGACCTTGCTGTCATGCTCTCTAGCTGGGCTGAACTGTTAACTGTACTGGTTGAGTAGAATTTCTGGCTCTGTTCCATGGTCTGGTGAGAGAACTGGCTGGACTCTGTAATAAGACAGAGCTGCTGGCTGAAATTGCCTCTGATTGAGCAGTATTGTTGGTTGTCTTCCTTAGATGGCCAGTACTACAGTTTTGAATATGTAGTTGGGCAAGGCCATGTTTTAGGTGTCAAGGCTGAACAAAGACTCTGAGATTGCTACCTAACCATGCAGGGTGACAGGACCAGAGGCTGTGCTCCACAGATACACATGGGCATGGGTTCAGCTCTAATCCTGGGATGACCTAAGGCAGAGCACCATGGCTTGATATATTAGCCACTTGGATGCTGGGCCTGGGTGGAACAGATGCTCCTTCTACAGTTAATTGCCACCATGCCCCTGTTTTCTGGCCTTAGGAAGCGTTAAGGAGCACAAAGGGCAGGGCTTGACTGGGTGAAAGCTTGGCAGCTGGGAATGGTTGGGGCCAGATGTTCTCTTTGCAGGTAATTGCCATTCTACCCTTATCTCCTGGCCTGGGGAAGTTTCAAGGGGAGCACTGGGGCTGAGTGTGGAAGCTGAGCAGAGATTCAAACCTGGCAGACTAATCAACTGTGCTTCTTGTTGAGCATTGCAAGCCTCTCTGGTGGTGTGCCTCTGCTGGCCAGAATGCAGAGCAACTATCAAGACCCCTGAACTGGTCACTGTGAGTCTCACCCTGTTCTGAGTTTCTAAATAAACATTGCTAATGTTTCCTGTGGGATAAGACAAGAGAGTTTCTTCTGCGAAGGATTCCAAAATGGTGGGAAAGCTGAATGTTCATTCTCAACTCTCTCTTCCCTCTGTAAAAGCCATGGGTTCTGGGAATCCTCTTATGTGTGATGTGCTGGCTTGAGGGAGGGACAGTGTGGTCAAAGTAAAACCTCCTCTTGCTCTACGTGTGTGGTTTTTCTCAGTACTGTGGTCCAAGGGGATGTCTGTGCCTCACTTCAAGTTCTGAGATATTCACAAGGGTATCCTTGTCTGCTGTTGGTTGCTAGTTGGATTTCTGTGGTGGGACTACTGGAGTCAGAGAATTCCTATTCTATTATATTTCTAACATCTCCCCTAGTATGAACATTTTAGCAACATTCACTTTTCCAGTCTGTGAACATGTAATATCTTTCTATTTGTGTCTTCATTTTCTTTCCTCAATGTTTTATAGTTTTTAGTATACAGATCTTTCACTTCTTTGGTAAAATTTATTCCTAAGTATTTTTTGGATGATATTATAAATGGGATTTTTAACTTCTTTTTTTGGATAGTTGTTATGGTATGTGTAAGTGCTACTGATTTCTGTACGTTGATTTTGTATTAAAGTCTTAAACATAAGACCTGAAATTTTAAAACTACTGGAGTAAAACACAGGGGGAAAACTTCTTGACATTAGACCTGGGCAAATATTATTTTTGAATTTTGACCCTAAAAGTACAGGCAACAAAATAAAAAATAGACAAATGTGGTTGCATCAAAGTAAAAAGCTTCTGCAAAATAAAGCAAACAGTTAATGGAGTGAAGAGACAACATACAGTATGTGATAAAATATCTGTGAACTACACATCTGATAAGGAGTTAATATTCAAAATATTTTAGAAACTCAAACAACTCAGTAGCAAGAAAACACATAAACCAATCAAAAAAGTGGGCACAGGGAGTTTCCCAAAAGAAGCCATACAAATGGCCTACAGTATATATAAAAATGTGCTCAACATCGCTAATAATCAGGGAAATGCAAGTTAAAAACACAATATCACCTCACATCTGCTAGAATGGCTATTATCAAAAGACAAGAAATAACAAGTATTGGCAAAGATTTGGAGAAAAGGGAACCTTTTTACAGTATTAGTGGGAAAGTAAAGTAGTATGGCCATTGTGGAAAACAGTGTGAAGTTTCCTTAAAAAATTAAAAATGAAACTACTATGTGATTCAACAATCCCACTACTGGGTATATAGCTAAAGGAAATGAAATCAGTATTTTGAAGAGATATCTGCACTCCCAAATTTATTGCAGCATTGTTTACTACAGTCAAGATATAGAATCAACCTAAGTGTCCTTTAGTGGGTAAATGGATTAAAAAACATGTTATATAAGTGTAATGGAATACAACTCAGCCTTATATAAAAAGGGAAGTTTCTAATTTGTGACAACATGTATAAACCTGAAAGATATTATGCTAAGTAAAATAAGCCAGATATAGAAAGACAAATATTCGTGATCTCACTTTTATGTGGAATCCTAAAAAGTCGAGTGCGTGGAAGTAGAAATGATCATTATCAGGGGTTGGGTTGGGGAGTGGGGAAGAACTGGGGAGATGTTGGTCAAAGGATACAAAATTTCAATAAGACCGGAGTAATAAATTCAGGAGATTTATTGTACAGCATGATGACTATAACAATGTATTGTATTTTTGAAAATTTCTAAAAGAGTAGACTTTGAGTGGTCTTATTACAAAAAATGGTAAGTGTGTCCAGCTGTCATTCCTGGAGAACACCTGAAAACCATCACCCTTTGGGACCATCAGTGCAATAGAGGACTGACTTACAAAGGCTGTGGTCTTAGGCTTGAAGTCTTTTTAAACACTTCTGTGATAGTGCTTATTCTGTCAGATCAAATATATTTACTTTTCTGAGTGATAGTCCATTTAGGCTGTAAGGTGCTCAATGGAAGAAATATGTCCGATACATCTCCATACTACTACTGTTGAAAGAAGTAAAACGAACAGAGCTTGGAATGAACAAGCAGAGGTGGGCAGGAGGTACAGGGTGGACCAGAGTGGGAAGTACTTCTGCAGTCACGAGGACATCCTGCTTCCATCTTATTAAATCTTTAGGCATGTGCCCAGGAAGACACAGGGGTCATCTTATTACACCTTTAGGCACATGCTGAGGCAGCAGGCAACTGGGAAGTGTCTGGTGCTGTCACCTCCCTGGTTGTGAAAACAGCAGCATACTCAGGTTGTGCATCATCGTGTACACTGCACGGGATAAAAGGGCTCCTACCCTGGGCTTCTCATCCACAGCATCCTTAGGAGCAGCCTTCTTCTCCTACCTCCTCTGCATCTGGTGAGTGGCCAGCAGGGGACAGATCCTCAGCTGGGAGTGTTTGGGAAAGAGAGGCCCAGAACTGAAATGGAACCATCAGAAAGAAGCCCACAGTGGGCAGCAGTGGGGGAGGTGATGGAGAATAAGGAGCCTCTAAAGCACATGTCAGGGACCCGTGAGCTGCAAAACCCGCAGGACCTTAGGATTCCTTCACATTCTTGTTTGGAGCATGTTGTCAGGAATGCACATAGATCCATTTTATATTTTTAAGGTTGCTTTATCCAAATGCATGTGTAGGGTTCCCTCTACTACATTCCCATTTCTCTCCTACAGATCTTGGCTTAGAAAGTGGCTTCATCAAGGGGGTCAGTGTGTGACAAACCCAAAAATAAGGAGATGGTCTGAGGGTTCTGTGCTCAAATGTTTCTATTATTCTGTTCAAGGTAAAATTCCTGCATTCCTGCAAAGATGTCCTGCCAGCAAAACCAGCAGCAGTGCCAGCCCCCTCCCAGTTGTCCCTCACCCAAGTGTCCCCCAAAGAGCCCAGCACAGTGTCTGCCTCCACCCTCTTCTGACTGTGCTCTAAGCTCCGGGGGCTGTGGCCCCAGTTCTGAAAGTGGCTGCTGCCTGAGCCACCACAGGCACTTCAGGTCCCATCAATGCCGGCGCCAGAGATCCAACTCCTGTGACAGGGGCAGTGGTCAGCAAGGCGGGGGCTCCTGCCGTGGCCATGGCTCTGGGGGCTGCTGCTGACCTGGATCCTGATGATGAGACAAGTGATCTTTGGAGGAAACAAGGATCCCAAAGGCCCAGGAAAAGCTCCATCCTGATGCATGCTTTTCCAGATACCTTGTTCTGGCTTTCACAAGCTGAGCTGGGGGTGTTCCTGTTGAGTATCCAAGCTGTCCCCAGAAGGTGCTTCCTGTCTGGTGTATAGGATCTCACAGTTCCCTCATCCCTGCCCCTGCCAAGGATTGGCAGTTCCCTGTGCCTAACCCTGCCAAAAAATAAAGCTTCTTGTTCTCATTACCACGGTGTCTCACTTGTTAGGAAACTATCCAGGATTTATCCATCCAGGCCAGGTTCTCCTGTCACCCGAACTCGCAGGACCTTAGAAAGCCAGAGATTTAAGTGTGTTACCCCTGGTAGAGGTGACCCCAGAGAGCTGACCTCATGCTCGGGCAAGTAACTGGGCTGTGTTCTCCCAGCCAACCCTCTGTCATCACAGGACACCTGCTCAGCCTCAGACCTGTGTAGTTTTTGCTCTGATGACAAACAGAGGAGCGAGGAATTGGGAGCCCCTCATGGAGGGGAGGAAAGGTTGATGGGCACCATCACCAGGATGGGTATGGAGCCTCCCAAGCCAGGCATCAGGGTTGGGGCTGTGGAGAAACTCATTTGTGGACATCTGCTGCATTCCATAGGAACAGAAAGGGCCCCCCATTACAGTTCTGGGGTGTTCTGAAACTTCAGAACTTACTCCTCTGTTGTTGTATCCCAATGACTACAGATTTTACTCCTAAGAAGCAAAAGTGGTCACTCAGCTATATTCAGCCCCACAATCTGGCTACCATGAGAAAGTGCTTGGTCTATCTCTTTTAAATGTCTCTTTGCAGGACAGAGGCCACTGAAGGGACCCTTAACATTAAGAGTAAAGTGGCCACCCAAGAGTAGTTCAAGGGATAATTCCTGAAAATACTTCCAAGACAGAGACAGGGGTCATGTGCTGGAGGCAGGAAAATGCTGCTGAGAATATCAATACCTAAACCTACCCTCTCCCCAGTCCACATTCAGAGCCACCCTCTTTCCTACGGCCCAGTGCCTTTATGCTCCCACAGGCATCACTATTTCAGTTTGCTAGGGTGGGCTGTCAGGCAGAATAAGAAGACAAAAATTATAACCCCAATAGTGAACATAATTTAATTTTTGTTGACAATTATAATTTAATTTAAATATGTATAAAGTTTGATTACAGCCTGACTGATTTATCTTGAAAAATATCTAGAAAAAGGTACTTATTTTAATATTAGAGATTAATTGAATGAGAAATTTATCTACAATTAAAATGAAATTCGCAGAGAAAATAGCATTCAGTTTGCATCAATTCTCCGTACCCAAAATATAGACATGATCAGGTCAGCTCCATTACATGAGATGCACCCAGCACTACCATCAACCTCAAAAGCAGCAACACATACCAAAGTCATCTTCATCAAGCCCATCCATTATCATGCATGCTTGCAGAACTTCATTTCGAGTCCAAGCAGATGAACGACTCCTCCCTCTGTGTTTTCATGGTCTTCAAATAAAGAGCACACATTCCCTGGATTTTGATGGAAGGTCATGCCTTTTGTAATGTGCTTACTGTGACTCTTGGCACTCCAATTGTTGTACTTTCCTTCTCCATATTTGCCCCTCAATCAGGTATTCATTTGGCTCCCCTCCTCTCCTGCCCAGGGGCCTATGTTACCTCCTGGGTACCAGTGAGGCTCTTTCAAGAGTCCTCATCTCCGCTGACTTTACCCTTCCATCTGTTTTACACACAGCCCATTCTGAATGTCCAGCATCCTTACCTCAGTCACCACCCCAACAGCAAGTGCTGATCACATCTGATGCTTGATTTTCCTAAGGGAACATTACAGAAAAAAGTAGATGGGCAAAGAACCATGGACTTCGTGGGTAGTCATTTACATTGCAGTACTTATCTCATGGAAGCAGTCTCCCTATTTACTTGACTGCCTGTGCAGTTAGACAGTTAATTTCTATAGGTCAGGTGATGTGTCATATTGAACTCTACCTTCCACCACAATGCATGGAGCATGACATATTTTAAGCACACATGTAGGCCTGGGTGGAAGGTGTACAAGTGAGGACCAGGGCTTCCTGTGTCAAACATGCCACCCTGTTCCTGGGAAGACGGTGAAGGCCTGGACCTGGGCTGGGTTGTTTGGTGCTGTCACCTCCCCGAGCAACCCATTCATGCTGCCCCTCACAATCTAGCAGCTCTGTCTTGGGCTTCCCAGACCATGGACTTCTTTCGAATAAGCTTTCTCTTGCTGCCATGAAACCAGATGGATGTCTAGCTGGAGACAGGACCTGAGCTGGAAGACCTAGGAAGACAAGCCCGGGTTTCTTCCATCAGGGGAGAAGGAAGCAGAGGGTATGGGATGGAGGAAGCAGGAAGAGTGTGGGGTTAATGGGCACCCTCCCGGGATGTATCAGGTGTCCTGTGACTGCGAAGGTCATGGGTCTTCAGCACACCCTCATCTTCTTCCTATATATGTTCTGAGAGATGCACTGATCTCACCAGACATCATCAAGGAAGCTTTACCCAAACAGGTTTATTCTCCTCTGTGATTACATGAAGATAGGACACCTCAGCTGCTCAATTAGAAAAGACCCAGTATCATTTTGTAGCAGGTGACCAAAGAGAAAAGAACATCTTTCCAGGATAAACTAACTCCAAATTTATTTTCATTTCCTCCCTATATTTCTTTTCTTTTCTTTTCTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCCAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCACGCTGTACTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTAGCCAGGATGGACTCGATCTCCTGACCTGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATGGCCCCTGGTCCTCCTCCCTATATTTCTTAGTGCAGAAGTACACCCATCAGAGAAGAGATATTACAAAGATTCATTTGCATTATTGCATTCTCTCTAGAGTCATTGATGCTTTCTGAGATTTTGTGTCAGCAAAACGCGCAGCAGGGATAGCCTCCAAAGGCTCCCAGAGTTCCCCACCCAGTCTGAGCCCCATGTCTAGTCTACCTTCAGTCTTCTCCTGCTATGGCTCCAGCTCCAGGGGTTGCTTTAACTCTTAGGGGGCAGCTGCAGCCTGGGCTACCACAGGTGCTATCTCTTCCACTGGCACAGGCACTAGAGACATGACTGCTGTGAGTTTACCCACTGGCAGCTGCAGCTGTTGCCAGAGCTTTGGGCACTGCTGCTGACCTGGGCAGTGCATTGAGATAAGCAGTTTTAGAGGAATCAGAGACCCAAAGTGCCCAGGATTAACCTCAGTCTGATGTACCTGCTCCTAACCTCCTGCCCATGGTCGGAGCTCCTGAGTTCATCCTGACAAGGGTTGTCAGTGATCTCCAGTGGTCTCCCTGGTGTCCCTCATGGTTGTCTCCACATCCATGTTCTGGTCAGTGCTTAGCAGCACTTATGTCTCACTCTGTAAAAAATAAAGCTTTCCTTTCTCACCTACGTTTCTATATTGCCCCTCCGAAGGCTGCTCCATTGCTCTCCCATGCCTTATCTCCCAGACTGAATGCTTCACAGGATGAGAGGAATGAGAGACAACACTTCTCTCTACTCATAGGGAGACCATGAGTTGCTGCTAGGAAGAGGCTACAGAAGGCCACATGGCTGCAGGGAGGAAAGTTCACCTTATTTCTATATGGAAGATCTGGGTGTTGAGGAGGTAGGAAGGGATCCTTGAAAGCTGAATAGTTGATGGGTGCAAGGAGAGAAATGTAGATGGTTGCAGAGGTATACACTGAGAGGAACTTAGAAGAAGTAAGAAAATAAAAACCTGATCATTGCAGGAGTTGTAAACTGGATATATTCATAGGGTCAATGATTTGTATACTACTCATGATGTGCCAGTGGCTTGACATACAGTAAATAATTTAATCCTCACTGCAGTCCTTCAAGTTACGTACAACCCTTGTCCCATTTTACAGATGGGAATCATCATGGAATGAGTGTCCAGGGTCTCCCAACAGCTGCCATGCAAACCTTGGCAGTTTTGCTGAGAAGCCTATGCTCCTGATGACTGTGGTGTTCTAAGTTCTTCTAAAATGTTTTAAGAGATGTGAGTAAACAATGGATTTGTTTTGTAATTATTTTAGTCCACAGTATTTTGTTGTTTGAATTATACATCACTAAACCACCAAACCATATGAATCACACTTTTAAGGAGTTCGCCTCCCAGAGTTTGGACCCAGAGTGTAGTATTCAGCTGCACCACAGGATTAAAATCATTATTTTTGATGTGCATTAAAACAACAATTCACTTTCACTACCAATTTTGAGAATGTTAATGAACTGGAGAAAGACTCAGTAAAAATTCAAGCCTTGGTGCTCATCAGTAAAATACTAGCAATCCAAGGAGGTCTCATAAACTCTGAGCCAAAGTGAAAGAGCAGATCTTAAGAGTAGTTTAGGGCTAGATACAACAGAGAAATTAATGTATCCAGTAATAGGTGAATATATTAAATTTTAGAAGCTTTTTTTCCAAGCTCTTGGGAAATAGGGAAAAGAAAATTACTCCCCTCTTCTGTGTTCATAGACATTCATTTTCTTAACTCATTGGGATGAAAAAGGTACCCAAAGGGATCCTATGAGGAAGTTGATGTCAGAACTGCTCTGATGAGTTTAGATCGACTGCCCAGCTCAATTCCTCTTAGTTGCCATGCCTGGGTTTATTGCCCTTGGATGGATACAGGCTCCACATCTTACTCATCCCATCAACCATCCCAGGTGACAGCAGGTGACACCATCTGGATTCATCATTTACTCTGGCTGGATTCATCATTTACTGATTCAACTAGCTAAGAAAGATTTGTTTAAGAAGTTACCACAGCTGTAGGACTTATAAAAGCCTATGATACAGACTTTTGATTCACTACGACAACCACTTGCTACTCAAAAATTGAGAAACTCTTGAATAAAATCAGCCCAGGCGACATAAAGAATGTTGTGTTATGACTTCTAGACCAAGTCCAACACCCAATCATTCATAATTTATCTGCTCAACACGTAGTTTTGTGGCACTGGTCTAGGTGTTTAGATCAGTGTGAAACAAGATGAAGTCCCCTTTCAGGCAGCTTATGTTCCAGTGGGCCCATTGGAGACATCTTCTGGTTTCCTGGCTTGTCAGCAGATTTAGACAAAGATGGTTCTATATTCAGTTGGATTCCCACTCTGGGGCACTTGACAGATGCCGGTAAAGGGTGGCTAAACCCAGTGAAGGCACCCATCATGGGCAAACTTTTGAAAACTGGATATCATTTTTTGGGTGAATACAAAAAGGACATCCAATGTCTGGTTGTTTCCACATCAAAGGTAGGAGCTTAGTGAGTCAAGGGGTAGGTGGGTGATTCCAATGGTGAAATGTTTGTTTAAAAGTTGAAAAGTCCTTGTCCCTTCCCAGTGCCTTTCTCACTTCCCAGTTCTCAGTGAACAACCCCATTCACCCAAGTATCTTGAAAGTGCTTCTGTTTGGTACTTAGCTATAATGTATGGAGCAAATAAAAAAAATGGCCACACCTATACCCTTCCCTGTATCAGGATACTCAGACACATTTAATGCAATAATAATGTTTTATTAAAACCTTGTCGTTTTAGGATATGTTTGAAACTTACATGTGTATTCCATTTTTACATACTTTTAATATATCATGATTCAGGATAAAATATATATCTATTATTATAATAAATGCATTGGAAAAATACTATAGAGTTTAGTGCTCTCTCTACAACCTTGGTCCATGTTGTGTCAGGTGCTCACGGTGATCATATTAACCTCATTATAATCATACCCATCAATTATCATTTCTATTTGGACAAATCTCTTTTAGTCATCCCATCCAATTTGAATCACTCTCTTCCCTGGGTCTCTTAGAATCAATAGTACAGTCGCTAAGATCCTGACACAAGGTTCCTTAAATGTATGTTAATCCATGATGCATATTACCAAAGCCATTGTGGATTTCTTATACTTGTCTCTGAATTTACCTGTGATATCCCTGGGTCATTTTGCCTCCATGTAAACAGATTTGTTTTGCCTCAGACATCTTTACCTTAATACAGCTATTAGGAGAAGCAGGGAAAGATTAAAACCTAGAAGTTCCTGTCTCCAAAATGGATGCTCTTAATGAGCAAATTATTCTGCATTCAAGACTGTACATGTCCCCAGTATTCCCCTCAGCCCTGTTCTACCTCGACCTCAGCATTGTCTCTTTCTCCTGGGCACCTCCTTGATGTTTCTTGGGTCCACAAATTTCTCTTAGTTGCCATGCCTCGGTTTACTGCCCTTGGATGGATACAGGCTCCACTTCTCATTCATCCCATCAACAATCCCAAGTGACAGCAGGTGACACCTTTTGGATTCATCATTTATTCAGAGTCGCTACAGAACCAAAAGGGACTAATGCCCCAAAACCCTGACTTCAGGCCTGGGGACTCCCACACACTGTATCCCAGCACCCTCTCCTGGCTCAGGCTTAGTTTCCTACTTATCTGTCAGTCTCACTACACCATCAGCCTAAGGGTAGGGATGGTATCTTCTTCAGTCTTGAATCTGCTTTGCCCAGCACAGTGAGTGTCACCATCTCAATATAACTTGTTTAAAGAAGGAATGATGTTAATGAATGAAAAATGAAGAATTGCAGACCTACAGAAAGACTGAGGCACAGGTATGTGAATAGTCACGGGGTTTCTTGAATCCCCACTCTCCTCAAAACTCTTGACACCTGCCATGGAGATACAGAGGTCTTGGGGCTACAGAGGCAAAGAAGCTGACTCCTAAACGAGACTCACATTCTCACCCCTCCCAATCCCAACACCCATTTCTTGCCTGCAAAAGAAAATAGAAAAAGAGCTCTAAGGTTTGCTCAGTCCTCACTGGAATCAGGATGCCTCAACCCAAGTTACTTTCTATTTCCTGCACTCCTCTGCTCGGGAATTTTTCCTAAGTTGTGGATTCAAAGCCACATATGCTTTGAAATAAACATAAAAAGATCCAATTTTTGATCCTGTTTGAGCCATCACAGGCTTTACACATCCCACAAGGCACAGCATCAGCCCTCTGGATGCTGTCACTCATGCAGTGACCAGGGCACTGAAAACCACAGTGGAGCAGGGCTGGATGATCCAGTGAAGCAAAGAGAGAAGCCTCTTCCCAGTGTGGTGATTTTCCTCCTCCCTCACCTCTGCTCCTCCTTGGTGGAGAAGTCCCGTGGAACATTAGTGAAGATAATAAGGGTGGGAATGCCCTTGTAGAAATTACTGTTAATAGTCTGAGAATTGGGCAGGTACTATAAATCCTAATCTTTTGTGTTTCAAAGCCATTTGCATCAACAAGTGTTTGGTTTCGAACTCAGCGTATCCTTGTCTTAGTAATCCCTTCTTAGGTCTTATTACCAGAAAGATCCTCACTCAACAGAATGCCCAGGTGCAGTTCCAGTCAGAACACTCTTGTGGTGCCCACTCCCAATTTTCTCTGTCAAACGTCATTGAGCTCTTTCAATGCTTCCTTTCACTTTTCCCCCAACCACTCTGCTGCAGTTTTGCATCCCACAGTGAACAAGCTTGTGTCCATTCCAAGCCCCCTGGAGATGAGACCTCCCTCAGAGCCAAAGTATATTCATTGAGCAGAGTATCTGTCACTAAAGTGATGCAGCTGCCTGGGACCTAGCACAGACCCTTCATGCCCCTAATATGTCCATTCCTCTCCCTACATTCAGGATAGGCAGAATGTTGAAAGAAAACATGGTAAAAGATAACTGTAGCAAAGAATTGGCAAAAGAGATGGCAGGTGTTGAAGAAACGGAATTTGTCAAGGGTCATATTGGTCAGGGTCTTCTATTGCCTCCCAGAGAGTTTTCCTTTTTCCCCATGGACTACAGGTAAGTAGCACATGAATATTCTCACCATCCAACACCCAACTCCCTGTCCTCCCTCTTGATCTTCTAAGATACTCCTGTTCATGAAAGACTTCCTCCCTGACCTTCCAAACTCCATCATGTCTCCAGTAACTACCCAGTTTCTACTTCCAGTTGCCTTTACAGTACCTGTGTGTGGTCATTATGAAGCTTCCACCAACATTCCTGAACTTGCTTCTCGTTTGTCCTTGGGGACCTGAAATCTGGGCATTTATTGATTTGATTGATGCTAGAAAGGGTGGGAGAATCCAAAACTGCCCCTTTCTTATAAAAACCTAAGAGCCTACTAAGTTGTGTATTGAACAGTCTAAAGTCAGTACAATAAAAACATGAAGCATTGTCTTTTTCGGTCATTGTTTTTTCCTATGCTCTGTTGAATCTCTCTTGAAAATACCTCAGGGAAATTCCACATTTCGTCAGTCACTTCTATGGATACTAAAGTCCAGACCAGCTAAATTTAATTCTGAACAAAATTTGAAACTCAAATTCTCCCTTGCACACAAGCATTGTCCAGGTATCTCCCAGGAGACTGGAGTTGGAAGGGGAATATGATGGGCTCTTTCTCTCATTCACTACCACCCCTCCACCTTCTTCCTCAGTAGCCCTTCCTCCTCCATTGTATTGGGAGATGGAAAAGGGGAGGGAGAATCATTACACATGTGACTGTACCACTAGCCTCCTCTGTTGGCAGGTTCTGCGGCAGGGCTGTCTCTGCTTCTTCTGTGTGGCAGGTTCTGCAGGAGGGCTGTCTTATAGGGTGCTTTTGTGAGTCCTGGAGTATCTTCAAGCATTTTCCTAACAGCATGATTTCCAGACATGGGATGAGCAGTCGGATTTAACCCTTCACGTACTCCCTAAGCTCCTACCTTCGTTGGCACCAGCCATGGCTTCTCGATAATGAGGTCTGTCTGCCCAACAGAAAACCATCCTAAGCACAACACTAGCAAGACTGTGGAAGCTGGTCTTCCTTCTTAGATGTCATCTGCTGTTATGTCTCAATGTCCTGTTCTATCTCTTCAGTTCCTTTTCTTTATTCAACAATAGGCTCAGAGGTTAGAACATCAAGTCTACTACTACAGCAGACATTCTGCTGGGGGATAAAAATGCTGTCTTTCTTTCTTGAAGGAATCTCTAACATCTACAGGCTGTCATTGTGAATCCTGCCCTTTCAATTGACCTCTGTTGTAGGAGAACAACCAGTTTCCCTCCCATGTACAAGATTAGGGGGAGACTACATCATTGTCTTTTAGGATAATAACTTTCCTATCTAAAAAATTCTCACCAAAGTTCAACCTTCCAAATATATAGCTGAACCAGAGAAATAGAGTTCTATTTTTTTTTCTTAGCAAGTCTTGCAGAGATTTTCAGCAGCTTATCCTAAGTTTACTTTAGTATATGGGGATAAGAGGCATCTACTATTTTCATCTTTTGACTTCAGCCAACATCGTAATACAAGAAGAAAATTTGAGTCCAACATCTTCTTACACACTGGGTCCTACCAGAGCTTTCTCAGGAGAATAGAGCGGTGTAAATATCTCAAAATACTATTTAATCTGAGGGAAAAATTCAAATCCATATAAGAAACTTAGGCACGTTGGAGGTATATGGCACTTTCTGGCCACTGCTTCCCATTTTCCTTAAGAATAACTTAGCTGCTTGCCATGGAATTTGATTGTCGCAGACATGGCAGGAACAGAATGGAGAAGGAACTGTGAGTTTTAAGCAAAGGGAGAAGAATTCTGTTTGTTGACTCATCCTTGATTGCTGATGTGGAATGTCCAAAATGCACTCCAAGGGGCTAAATCTGAGGTCCTGCAGTGCCTGTTCCTATAGTACCAATTGGAATGACTAAGTCATGAAATTTTTCCTGGATTCATCCAGCCAGAGCAGTCTCTGTATTTCCTTGATGTCTTTGGGCCACAGGAAGCCAAGGCTCCTCAGGATGGGACTCTCAGGACTAGTGATTCTCAGGGAGGTGCCCTTGTGCTGTAGGGGAAGTGACAAGATCATGATCTTATAGCTACTGTTTGTCATCACGGGACAAATCCTGTGCGTGTGAGAACTGTGGACACCTGATTTCAGGAAGAGGAGAGTGGTGACAGGAGCAATCACTAAGGTAGAAGGGAGATTAATGAGCTCTCCAGGTCTTGTGGGGAGGCTTTCAAGACAGGCAGTCAAGAATGGGGCTGGAGGAAAGCCTAACAGTCATCTATTGTGTTTTATAAAACAGCGGTAACACGATATATTGAATGTCATAGGCAAGGATTTTTTTTCCTTTGAAACTTGCCCAAAATGTGTGATTTATGTTTCTTTCTCAATTAACGCTTCCATCTCCTACCTCCCTCAGCTGCCAATGACTCAGGGTTGCAACCCATGCAGGAAAATGGCTATCATGCTTGCTCTGTTGGGAGGACAAGACTTGCTTATGATAAATACAAGATACAGAGAAATAAACGTTCAGATTTGCAGCAAAGTCTAAACCCCAGTAATTTTTTAACTGAATTTTTCAACAGATTGTGTCCCTCTTCAACTTCACCAGTATGGAATGAGAAAGTACCCATTTCAACCATCATGAGTAATTCCTTCCAATGCACTAGCAATTTGTGTGTTCTAAAGAATGCAAAAGAAATGGACACCTAGTGTAGTCCCGGGGCTAAGCCCAAAAATATCCCTTCAGCAAGAGGCTTCTGCAGGCAGAAGAATATCAGAGAGGGGAGTCAATGACAGGTCTGATCCTTTTCCTCTTCCTCCATTCCCAAGCCACATTCCTAGAGACAATTCACTTTCTCTTAAATATCTCAAAATAAATCATGGAATTCTGCCCCCCACCTCCCACCATGTTTTAAAGAGGGTAAGTTGTAAAGTGCATACTCTGATAAGGAGTTTGTTGTCTAAAAGCCATAAACTATCAAGTACAGGGAGCAATAACAGGCATTTACCATAAACATGTGTTATTTAAAATTACCATTTAACTTAAATTTAATGTTCTGTTATAGTTCTGACTTTAACTTTTTAGAAACAAATAGCAAAGTTCAGGTATTATAATAATAGAGATGAATTCAGTGAAAAATTCATGTCTAAAACTATTATACAATCAAATGGGAAAAATACAAATCAGACTTTATATGTCATCCTACAGAAACCTTAGAATTTATAAGGTTTGTTCCATTAAATTTGATGCACATGATGTTACTACCATCACTAACCTCATCATCAACAATACATTGAACGAATCATGTTCATGACTCACACCAACTATCTTACATATTTTATGCTCATGGACCATTTTATTTGCTTATAATCAGTATCATATATCCCATGGGAAGCTAAATATGGGCAAATTGACCTTTTTCATATTAAGTATGAGTCTTGTGATCTCAACTATTGTATATTCCTTAATGATTTTGTCTGCTTATTCATATAATCCTACCTTAATTCTCTTAAGGGCCCCAACAGCCCCAGACAGGGCTTGTGTCCCATTCTCCATTCATTACCTAATACATCTCACTCCCAGGGTCCAATAGTCTCAGATCACCCAACATCCCCAAGAGTCAGGAGCCAATTACATCTCAACAAACCATGCCCCTGGGGAATATGCAGAGGAATAGGGAAGTGATGTCCAAAAAAAGACATCCTGGGATACCCAGGACGAATCACATGATATCATATCAGACACATAAGTTTACATCTCTGATGTTAGTCCAGTTAACTTTGAAAGGCTCAAGGTCAGGAAATGTGTCATATGCATCTTTACATTCTCCCTCAAAGTGCAAGAGGCAGAGCTCAAACTAAAGCATCCAAACTGAATGAGTGAAAGGAGAAGAAATGACAGGTCCCCAACACACGTGGAGATCTGTCATCAAGACTTCCTGGTTCCCTCTTGCCAGGCATCTTGGCAAGCATGAAGCAAGATGCTGGAGGCCTGGGATGGGAGTGTTTGGCTCTGCCACCTCCCCTTGTTGTGAAAGCAGCATGCCTGGTCTGTGCATCTCTAACCCTGCACAAGATAAAAAGCCTCTTATCTTGGGCTCCTCATCCACAGCCTCCTAGAGAACAGCCTTCTCCTCTTCAGCATCTTCTGTATCTGGCAAGTATCTAGCAGGGGACCCTCAGCTGGGGGTGTCTGGGGAAGATAAGCCCAGATTTTACTAGGGAAGGGGGAAGCAGAGGTGTCAGATGTACAGACAGCAGGAAGAGGACTTCAGAGGGCAGCTGAGGGTAGGGGAAGGGGCAGTGAGCAAGGAACCTCTTTGGGGTGCATGGGAGTCTGTGACTCACCAGAGCCCTGGCTCTCAGCATTCTCTCCACTCTTTTCCTGGGAGATGCATACATGCCCAGTGATATTCTCTGAGAATCATTACTCAATTAGGTGCTTTTGCATCAGTGTTTTTGTGAAGACAGGAGGACTTGGGACCCAGTTAGAAGACACCAGCATTCTTTTCTGGAAGAGGGAAAAATGGAAGGAAATGTCTTACCAGGCCAGTTTTACTTGAGATCAGTTTCTGTTTTTATTCCTGAAGTGCATATCTCAGGAAGCAACTGGTATTAGGAGTAAGGGCTTCATAAAACCATTTGTAGAGGAGACATTAGCCTGGAGCTTTTGCGTTGACCTTTTCCTTTTATCTATCCAGGCTGTCACCTCCTGCCAAGATGTCCTGCCAGCAGAACCAGCAGCAGTGCCAGCCTCTGCCCAAGTGCCCCTCACCCAAGTGCCCCCCAAAGAGCTCAGCACAGTGTCTGCCTCCAGCCTCCTCCTGCTGTGCTCCAAGACCTGGGTGCTGTGGTGGCCCCAGCTCTGAGGGCGGCTGCTGCCTGAGCCACCACAGGTGCTGCAGGTCCCACCGATGCCGGCGCCAGAGCTCCAACTCCTGTGACAGAGGCAGTGGTCAGCAAGATGGTGCCTCCGACTGTGGCTATGGCTCTGGAGGCTGCTGCTGACCTAATTCCTGATGCTGAGACAAGCGACTTTAGAGGAAACAAGTATCTCAAGGAAAAAGGAAAAGCCCCAACTTGTTAGATCCTTTCTTAGACATGCTAATTAACCATTCATTCATGGGGAAGAATTGTGCTTTTTCCAAAAGGCTCCACCCATGTGTTTTCCAAGATCGTGGAAGCCTCCTTTCCTCCTGACAATGTTATCACTTGTGTCTGATTATACAGAGAAATAAAGCTTCTGAACAGCACCTGCATCTAACTTGTCTTTCACTCTGCTCCACAGAAGGCTGCTCAGTGGGTCTCCCCTCCCTCAGCTCCTGAAGGTCTAGCACACCCTGCATAGAGAATAATACTGGCTTGTGGCTGGAAAATTAAACGTTCATATTTTTCTTCATGCAGGGAGTCCCTGTGGGAGATTTGAGTATAGAAGTGTAGGAGAAAGGGGAGGTGTTGAGAGAGGTTGGTGAAAATCTCTTAAAAAAGGCCTAAGATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTAGAAAAGATCAACAAAATTGGTAGACCGCTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACAGATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACACAAATAAACTAGAAAATCTAGAAGAAATGGATGAATTTCTGGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGACTCTAAAATTGAGGCAATAATTAATAGCTTACCAACCCAAAAAAGTCCAGGACCAGAAGGATTCACAGCCAAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGTCTGGCAGAGACACAACAACAACAACAAAAAAGAGAATTTTAGACCAATATCCCTGATGAACATCGATGCAAAAATCCTCAATAAAATACTGGCAAACCAAACCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTT	AG	20	PASS	ClusterIDs=HG3_10X_allpass_3657:HG2_PB_pbsv_859:HG2_10X_allpass_134:HG3_PB_pbsv_872:HG2_PB_pbsv_858:HG2_Ill_tnscope_86:HG4_PB_SVrefine2Falcon1Dovetail_538:HG3_PB_SVrefine2Falcon1Dovetail_504:HG2_PB_SVrefine2PBcRplusDovetail_588:HG2_PB_SVrefine2PB10Xhap12_706:HG2_PB_SVrefine2Falcon2Bionano_147:HG2_Ill_MetaSV_241:HG3_Ill_MetaSV_226;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_147:HG2_PB_SVrefine2PB10Xhap12_706:HG2_PB_SVrefine2PBcRplusDovetail_588:HG3_PB_SVrefine2Falcon1Dovetail_504;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00332118;ClusterMaxSizeDiff=0.00313494;ClusterMaxEditDist=0.00993249;PBcalls=8;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=-32196;DistBack=0;DistForward=-32198;DistMin=-32198;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:152555543-152587740;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:82:46:0|1:81:1:0:26:0|1:45:0:0:32:0/1:65:17:0/1:435:258:32153:.:.
chr1	153133706	HG2_Ill_GATKHCSBGrefine_545	ATAATAAAAAATAATAACAATAATAGTAGTCATCCTAACACATATGAAGTCACATCTCATTGTGGTTTTTGCTCTTCATTTTCCTGGTGATTAGTGATATTGAGCATTTTTTCATATACATGTTGGCCATTTGTATTTCTTCATTGGAGAAATGTCTATTCAGGCACTTTGCCCAGTTTTTAATTAGGTTATTTGTTTTCTTGCCTTTGAGTTGTTTGAGTTCCTTGTATATTTTGGATATCAACCCCCTATCACATG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_867:HG4_Ill_Krunchall_1136:HG2_Ill_Krunchall_1091:HG2_PB_assemblyticsfalcon_1227:HG4_Ill_MetaSV_259:HG2_PB_HySA_1607:HG2_Ill_MetaSV_242:HG4_PB_assemblyticsfalcon_1183:HG4_PB_SVrefine2PBcRDovetail_488:HG4_PB_SVrefine2Falcon1Dovetail_540:HG4_Ill_scalpel_741:HG4_Ill_SVrefine2DISCOVARDovetail_604:HG4_Ill_GATKHCSBGrefine_578:HG4_10X_allpass_136:HG3_PB_assemblyticsfalcon_1185:HG3_PB_SVrefine2Falcon1Dovetail_505:HG2_PB_pbsv_861:HG2_PB_assemblyticsPBcR_1206:HG2_PB_SVrefine2PBcRplusDovetail_590:HG2_PB_SVrefine2PB10Xhap12_708:HG2_PB_SVrefine2Falcon2Bionano_149:HG2_PB_SVrefine2Falcon1plusDovetail_589:HG2_Ill_SVrefine2DISCOVARplusDovetail_668:HG2_Ill_GATKHCSBGrefine_545:HG2_10X_SVrefine210Xhap12_655;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_655:HG2_Ill_GATKHCSBGrefine_545:HG2_Ill_SVrefine2DISCOVARplusDovetail_668:HG2_PB_SVrefine2Falcon1plusDovetail_589:HG2_PB_SVrefine2Falcon2Bionano_149:HG2_PB_SVrefine2PB10Xhap12_708:HG2_PB_SVrefine2PBcRplusDovetail_590:HG2_PB_assemblyticsPBcR_1206:HG2_PB_pbsv_861:HG3_PB_SVrefine2Falcon1Dovetail_505:HG3_PB_assemblyticsfalcon_1185:HG4_10X_allpass_136:HG4_Ill_GATKHCSBGrefine_578:HG4_Ill_SVrefine2DISCOVARDovetail_604:HG4_Ill_scalpel_741:HG4_PB_SVrefine2Falcon1Dovetail_540:HG4_PB_SVrefine2PBcRDovetail_488:HG4_PB_assemblyticsfalcon_1183;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0116505;ClusterMaxSizeDiff=0.0116279;ClusterMaxEditDist=0.023301;PBcalls=14;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=11;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-257;DistBack=12492;DistForward=-256;DistMin=-256;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:153133707-153133965;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:38:0|1:31:0:3:32:1|0:0:18:43:0:0/1:41:25:./.:.:.:.:.:.
chr1	154352325	HG2_Ill_250bpfermikitraw_1082	CTCCTCACTTCCCAGACAGTTGGCGGCCAAGCAGAGGCGCTCCTCACTTCCCAGATGGGGCAGGAGCCAGGCAAAGGCGA	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_1082:HG4_PB_pbsv_872:HG3_PB_pbsv_877:HG2_PB_pbsv_865:HG4_Ill_GATKHCSBGrefine_580:HG4_Ill_250bpfermikitraw_1079:HG4_Ill_150bpfermikitraw_1027:HG3_Ill_GATKHCSBGrefine_540:HG3_Ill_250bpfermikitraw_1073:HG2_PB_assemblyticsfalcon_1232:HG2_PB_assemblyticsPBcR_1212:HG2_Ill_GATKHCSBGrefine_548;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1082:HG4_Ill_GATKHCSBGrefine_580:HG4_Ill_250bpfermikitraw_1079:HG4_Ill_150bpfermikitraw_1027:HG3_Ill_GATKHCSBGrefine_540:HG3_Ill_250bpfermikitraw_1073:HG2_PB_assemblyticsfalcon_1232:HG2_PB_assemblyticsPBcR_1212:HG2_Ill_GATKHCSBGrefine_548;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0126582;ClusterMaxSizeDiff=0.0125786;ClusterMaxEditDist=0.0253165;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-79;DistBack=92171;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=105;REFWIDENED=1:154352324-154352510;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=179.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:37:1/1:1:11:4:23:./.:0:4:2:0:1/1:0:9:./.:.:.:.:.:.
chr1	154353497	HG2_Ill_GATKHCSBGrefine_549	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTT	C	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_973:HG3_Ill_svaba_1032:HG3_Ill_Krunchall_1129:HG3_Ill_GATKHC_1367:HG3_Ill_GATKHCSBGrefine_541:HG3_Ill_250bpfermikitraw_1074:HG2_Ill_svaba_1006:HG2_Ill_Krunchall_1094:HG2_Ill_GATKHC_1311:HG2_Ill_GATKHCSBGrefine_549:HG2_Ill_250bpfermikitraw_1083;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_973:HG3_Ill_svaba_1032:HG3_Ill_Krunchall_1129:HG3_Ill_GATKHC_1367:HG3_Ill_GATKHCSBGrefine_541:HG3_Ill_250bpfermikitraw_1074:HG2_Ill_svaba_1006:HG2_Ill_Krunchall_1094:HG2_Ill_GATKHC_1311:HG2_Ill_GATKHCSBGrefine_549:HG2_Ill_250bpfermikitraw_1083;NumExactMatchSVs=11;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-52;DistBack=-13;DistForward=11026;DistMin=-13;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:154353496-154353551;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:27:0|1:15:1:3:23:./.:0:17:14:1:0/1:9:11:./.:.:.:.:.:.
chr1	156526704	HG4_PB_SVrefine2Falcon1Dovetail_552	TAGAAATTGAGTAGCTCAGCCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCACCTCTGCTGGGCCGCAACCCTGTCTGGGATGTGAGGAGTGCCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGCGGGGGGGTCAGCCCCACGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCTGGCCAGCCACCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCTGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGCGCGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCACCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCAGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCACCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGCGGGGGGGGGGCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCGAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCACCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCAGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_669:HG3_10X_allpass_158:HG4_PB_pbsv_880:HG4_Ill_Krunchall_1157:HG3_Ill_Krunchall_1143:HG4_10X_allpass_138:HG2_10X_allpass_135:HG2_Ill_Krunchall_1109:HG2_PB_assemblyticsfalcon_1250:HG4_PB_assemblyticsfalcon_1210:HG3_PB_assemblyticsfalcon_1211:HG2_PB_assemblyticsPBcR_1229:HG2_PB_pbsv_873:HG2_Ill_tnscope_87:HG4_PB_SVrefine2PBcRDovetail_495:HG4_PB_SVrefine2Falcon1Dovetail_552:HG4_Ill_SVrefine2DISCOVARDovetail_622:HG4_Ill_MetaSV_266:HG4_Ill_GATKHCSBGrefine_585:HG3_PB_pbsv_888:HG3_PB_SVrefine2PBcRDovetail_516:HG3_PB_SVrefine2Falcon1Dovetail_515:HG3_Ill_SVrefine2DISCOVARDovetail_548:HG3_Ill_MetaSV_230:HG3_Ill_GATKHCSBGrefine_549:HG2_PB_SVrefine2PBcRplusDovetail_601:HG2_PB_SVrefine2PB10Xhap12_719:HG2_PB_SVrefine2Falcon2Bionano_160:HG2_PB_SVrefine2Falcon1plusDovetail_600:HG2_Ill_breakscan11_107:HG2_Ill_SVrefine2DISCOVARplusDovetail_682:HG2_Ill_MetaSV_246:HG2_Ill_GATKHCSBGrefine_553;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_669:HG4_PB_SVrefine2PBcRDovetail_495:HG4_PB_SVrefine2Falcon1Dovetail_552:HG4_Ill_SVrefine2DISCOVARDovetail_622:HG4_Ill_MetaSV_266:HG4_Ill_GATKHCSBGrefine_585:HG3_PB_pbsv_888:HG3_PB_SVrefine2PBcRDovetail_516:HG3_PB_SVrefine2Falcon1Dovetail_515:HG3_Ill_SVrefine2DISCOVARDovetail_548:HG3_Ill_MetaSV_230:HG3_Ill_GATKHCSBGrefine_549:HG2_PB_SVrefine2PBcRplusDovetail_601:HG2_PB_SVrefine2PB10Xhap12_719:HG2_PB_SVrefine2Falcon2Bionano_160:HG2_PB_SVrefine2Falcon1plusDovetail_600:HG2_Ill_breakscan11_107:HG2_Ill_SVrefine2DISCOVARplusDovetail_682:HG2_Ill_MetaSV_246:HG2_Ill_GATKHCSBGrefine_553;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0434683;ClusterMaxSizeDiff=0.0434683;ClusterMaxEditDist=0.0434683;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2231;DistBack=106689;DistForward=-2211;DistMin=-2211;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=1:156526705-156528954;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:107:./.:0:0:0:0:./.:0:0:0:0:1/1:0:43:1/1:4:128:2210:.:.
chr1	157173865	HG2_PB_SVrefine2PBcRplusDovetail_603	CCAGGGCCTGAGGATGCAGCTCCTTTGTAAAAGCTCCCTCTCCCTAACCCACCCTGTATAGTCTCTTCTATGGGTGAGCCCTTAGGCTCACAGGGAAGCATGATAAATGGCAGTAGTGACCACAGGTGTTCATCCTTCTCATAGGAAGCTGACCGTGGATTATGTACTCAGAGGTGGTAATCATCTGCAGAAAGGGGATGTCTGGCATGCAGAAAAAAACAATAGACATCCATCAGCCTGCATGGGCCATGCATGTCCAGCCCATCCAGGGAGGGAATCTGTGTCTGGGGAGACAAGCACTCCAGGGCTGGGGGGTGTCCTGAGGGTTTATCAGGCCTCACTCCTCAAGTCCTCCTCCCCTTCTTGGATTTTGATGAGCAATCCAGCCTCCCAGGCTCCTTGATGCTGGAAACAGGGTGTCCAAGTGCCAGTCCCACATTTATGTCTCGGACAATGTGGCCATCTCCAAATATTGGCCCAACTTCTGGACTTGCAGGTTTGAAGACTGTAACAAGGATATGGTTGTTCACTGAGGTGGGGACCTTCTGATTGCACCACATGAATAGCCTTAGTGCTCCTCAGTTCCATTACTTTCCTGAGTCTTCCCAGTCTTGCCTCTACCCCATTCTCTGCCATCCCATTTCCATCACTCTTCCTGGGAGATCACACCTCTCTAAGGACAGATGCTTTCTAGTTCAAAGTTTGCATTCTGGTCTGCAGGGTTGCTCACTATACAGGTGAGGTGACCATTCAGCTGGGTCAGAGGAAGGCTCATGTTTAGCTTCCTGGAGTTGGGGGCTGGCACCAGTGTCCCTCTCTGCTCCAGCTTCCTTGGGAGGACCTTGCTCAGCCAGGTCACAGTTAGGTTCTCTGTGGCCCCTGGAGTCCCACACTCCAGGCTGATATTGTATCAACCTGATGTATTGGATGATGAATTAATCAGAATTTGAGGATTAGGTATGGGTTCTGGGGCAAGAAAGGAAAAAGAGAAATGGAGCTTCAGGATTGGAGGCTCACCTGAGTATCTCACCCACTCTCACCTATGTGAAGCAGCAATGTGAGGCTGCCCATTCTCTGAACATAGGCCTGGGGAAGGAACCAATCCTCCTGGCCCAGGGGTTCTGACTCTTAGCCCAGGGGCAGATGGTTGAGGCCCTTCCCACTCAGAGAGGGAACCCGGAGCACCTCACCACTCATCTACTCTAAGGAGCAAGGTGAGCATCACTTCCTGGACTTTCCCCAGGCTGCCCTGGCCCCTCATCACACCTCCCATGCCTCCTTGGCTATTCAAATTTCCCTGCTCAGAGATTTTCCACGACCTCTGTGGGAGATTTGAACCTAGAATGCATACCCCTCCTAGCAAGCGTTAGACTAAAAGGGTAAAACAAAGACACTTTAAAACATACTAATAATTACAAAGTTAATCACCTGTCTAAAGGAAACTCAAAGATGTTCAGGGAAAAAAATTTTAATGAATTCAAGAACAAGGAAGAAACGAGATATAGCAATGATCAAAGAAATAAGTGAAACTC	TTTTATCAAATTT	20	PASS	ClusterIDs=HG2_Ill_Krunchall_1115:HG2_Ill_tnscope_88:HG4_Ill_SVrefine2DISCOVARDovetail_626:HG4_Ill_Cortex_164:HG3_Ill_Cortex_181:HG2_PB_assemblyticsPBcR_1235:HG2_PB_SVrefine2PBcRplusDovetail_603:HG2_PB_SVrefine2PB10Xhap12_722:HG2_PB_SVrefine2Falcon2Bionano_162:HG2_Ill_SVrefine2DISCOVARplusDovetail_686:HG2_Ill_Cortex_360:HG2_10X_SVrefine210Xhap12_671:HG4_PB_assemblyticsfalcon_1217:HG4_PB_SVrefine2Falcon1Dovetail_554:HG3_PB_assemblyticsfalcon_1217:HG2_Ill_SpiralSDKrefine_810:HG2_PB_assemblyticsfalcon_1257:HG4_10X_allpass_139:HG2_Ill_MetaSV_247:HG2_10X_allpass_136:HG4_Ill_MetaSV_267:HG4_PB_pbsv_884:HG4_Ill_Krunchall_1161:HG2_PB_pbsv_877;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_671:HG2_Ill_Cortex_360:HG2_Ill_SVrefine2DISCOVARplusDovetail_686:HG2_PB_SVrefine2Falcon2Bionano_162:HG2_PB_SVrefine2PB10Xhap12_722:HG2_PB_SVrefine2PBcRplusDovetail_603:HG2_PB_assemblyticsPBcR_1235:HG3_Ill_Cortex_181:HG4_Ill_Cortex_164:HG4_Ill_SVrefine2DISCOVARDovetail_626;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0098264;ClusterMaxSizeDiff=0.0098264;ClusterMaxEditDist=0.0098264;PBcalls=10;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1519;DistBack=-367;DistForward=-1523;DistMin=-1523;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:157173865-157175396;PctSeqSimilarity=0.9474;PctSizeSimilarity=0.9993;PctRecOverlap=0.9896;SizeDiff=-1;StartDistance=5;EndDistance=16;GTMatch=0;TruScore=97;MatchId=182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:32:0|1:43:0:0:29:0|1:46:1:0:48:0/1:68:20:0/1:136:46:1499:.:.
chr1	158488408	HG2_PB_SVrefine2Falcon2Bionano_165	CAACCAGCTAATTTTTTGTGTTTTTAGTAGAGACGGGATTTCACCGTGTTAGGCAGGAAGGTCTGGATCTCCTGACCTTGTGATTTGCCCGCCTCGACCTCCCTGTCAAGCTTTTATAGGTAGGAAAAGCAGCCTTAGTATAGATATTGGAAAATAAAGGAGAGAAATTGACTGACTAATAGCAATTTAATAAATAAATAAAGCTGCCTTTAAGAGTCTATCAATTATTTACTCTTTCATCAACTATATATTGAGTTTGACGATGGAA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_894:HG3_PB_SVrefine2PBcRDovetail_519:HG3_Ill_MetaSV_234:HG2_PB_HySA_1648:HG2_Ill_tnscope_90:HG2_Ill_MetaSV_249:HG4_PB_pbsv_890:HG4_PB_assemblyticsfalcon_1223:HG4_PB_SVrefine2PBcRDovetail_499:HG4_PB_SVrefine2Falcon1Dovetail_556:HG4_Ill_SVrefine2DISCOVARDovetail_632:HG4_Ill_GATKHCSBGrefine_592:HG3_PB_assemblyticsfalcon_1221:HG3_PB_SVrefine2Falcon1Dovetail_517:HG3_Ill_scalpel_862:HG3_Ill_manta_173:HG3_Ill_SVrefine2DISCOVARDovetail_555:HG3_Ill_GATKHCSBGrefine_554:HG2_PB_pbsv_881:HG2_PB_assemblyticsfalcon_1266:HG2_PB_assemblyticsPBcR_1240:HG2_PB_SVrefine2PBcRplusDovetail_606:HG2_PB_SVrefine2PB10Xhap12_725:HG2_PB_SVrefine2Falcon2Bionano_165:HG2_PB_SVrefine2Falcon1plusDovetail_604:HG2_Ill_scalpel_795:HG2_Ill_manta_231:HG2_Ill_SVrefine2DISCOVARplusDovetail_690:HG2_Ill_GATKHCSBGrefine_560:HG2_10X_SVrefine210Xhap12_675:HG2_Ill_breakscan11_108:HG4_Ill_Krunchall_1170:HG2_Ill_Krunchall_1119;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_675:HG2_Ill_GATKHCSBGrefine_560:HG2_Ill_SVrefine2DISCOVARplusDovetail_690:HG2_Ill_manta_231:HG2_Ill_scalpel_795:HG2_PB_SVrefine2Falcon1plusDovetail_604:HG2_PB_SVrefine2Falcon2Bionano_165:HG2_PB_SVrefine2PB10Xhap12_725:HG2_PB_SVrefine2PBcRplusDovetail_606:HG2_PB_assemblyticsPBcR_1240:HG2_PB_assemblyticsfalcon_1266:HG2_PB_pbsv_881:HG3_Ill_GATKHCSBGrefine_554:HG3_Ill_SVrefine2DISCOVARDovetail_555:HG3_Ill_manta_173:HG3_Ill_scalpel_862:HG3_PB_SVrefine2Falcon1Dovetail_517:HG3_PB_assemblyticsfalcon_1221:HG4_Ill_GATKHCSBGrefine_592:HG4_Ill_SVrefine2DISCOVARDovetail_632:HG4_PB_SVrefine2Falcon1Dovetail_556:HG4_PB_SVrefine2PBcRDovetail_499:HG4_PB_assemblyticsfalcon_1223:HG4_PB_pbsv_890;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0148423;ClusterMaxSizeDiff=0.0148423;ClusterMaxEditDist=0.018622;PBcalls=16;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=13;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-267;DistBack=-436;DistForward=177025;DistMin=-436;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:158488409-158488675;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=183.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:./.:0:0:0:0:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr1	158712031	HG2_Ill_svaba_1029	TGAAAAGTAGGGCAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGCGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_49:HG2_10X_allpass_138:HG3_PB_HySA_1316:HG4_PB_pbsv_891:HG4_Ill_Krunchall_1171:HG3_Ill_Krunchall_1157:HG2_Ill_Krunchall_1120:HG2_PB_assemblyticsfalcon_1267:HG4_PB_assemblyticsfalcon_1224:HG3_PB_assemblyticsfalcon_1222:HG2_PB_assemblyticsPBcR_1241:HG3_PB_pbsv_895:HG2_PB_pbsv_882:HG2_PB_SVrefine2Falcon1plusDovetail_606:HG4_Ill_MetaSV_271:HG3_Ill_MetaSV_235:HG2_Ill_tnscope_91:HG2_Ill_MetaSV_251:HG4_PB_SVrefine2PBcRDovetail_500:HG4_PB_SVrefine2Falcon1Dovetail_557:HG4_Ill_svaba_1023:HG4_Ill_scalpel_759:HG4_Ill_manta_202:HG4_Ill_SVrefine2DISCOVARDovetail_633:HG4_Ill_GATKHCSBGrefine_593:HG4_10X_allpass_143:HG3_PB_SVrefine2PBcRDovetail_520:HG3_PB_SVrefine2Falcon1Dovetail_518:HG3_Ill_svaba_1060:HG3_Ill_scalpel_863:HG3_Ill_manta_174:HG3_Ill_SVrefine2DISCOVARDovetail_556:HG3_Ill_GATKHCSBGrefine_555:HG3_10X_allpass_162:HG2_PB_SVrefine2PBcRplusDovetail_607:HG2_PB_SVrefine2PB10Xhap12_726:HG2_PB_SVrefine2Falcon2Bionano_166:HG2_PB_SVrefine2Falcon1plusDovetail_605:HG2_PB_HySA_1649:HG2_Ill_svaba_1029:HG2_Ill_scalpel_796:HG2_Ill_manta_232:HG2_Ill_SVrefine2DISCOVARplusDovetail_691:HG2_Ill_GATKHCSBGrefine_561:HG2_10X_SVrefine210Xhap12_676:HG2_Ill_breakscan11_109:HG4_PB_HySA_1274:HG3_Ill_Spiral_879;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_676:HG2_Ill_GATKHCSBGrefine_561:HG2_Ill_SVrefine2DISCOVARplusDovetail_691:HG2_Ill_manta_232:HG2_Ill_scalpel_796:HG2_Ill_svaba_1029:HG2_PB_HySA_1649:HG2_PB_SVrefine2Falcon1plusDovetail_605:HG2_PB_SVrefine2Falcon2Bionano_166:HG2_PB_SVrefine2PB10Xhap12_726:HG2_PB_SVrefine2PBcRplusDovetail_607:HG3_10X_allpass_162:HG3_Ill_GATKHCSBGrefine_555:HG3_Ill_SVrefine2DISCOVARDovetail_556:HG3_Ill_manta_174:HG3_Ill_scalpel_863:HG3_Ill_svaba_1060:HG3_PB_SVrefine2Falcon1Dovetail_518:HG3_PB_SVrefine2PBcRDovetail_520:HG4_10X_allpass_143:HG4_Ill_GATKHCSBGrefine_593:HG4_Ill_SVrefine2DISCOVARDovetail_633:HG4_Ill_manta_202:HG4_Ill_scalpel_759:HG4_Ill_svaba_1023:HG4_PB_SVrefine2Falcon1Dovetail_557:HG4_PB_SVrefine2PBcRDovetail_500;NumExactMatchSVs=27;ClusterMaxShiftDist=0.101587;ClusterMaxSizeDiff=0.101587;ClusterMaxEditDist=0.101587;PBcalls=19;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=-865;DistForward=-305;DistMin=-865;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:158712032-158712369;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:11:0:14:1/1:0:28:0:18:1/1:0:41:0/1:2:16:.:.:.
chr1	158851689	HG2_Ill_SpiralSDKrefine_816	GGGGAGTAATTCTTATTCATGATATGAAAACTCTAATGTGTTTCTTATTCCAGAAAA	G	20	PASS	ClusterIDs=HG4_PB_HySA_1275:HG2_PB_HySA_1651:HG2_PB_pbsv_883:HG4_PB_pbsv_893:HG3_PB_pbsv_897:HG4_PB_assemblyticsfalcon_1227:HG4_Ill_svaba_1025:HG4_Ill_manta_203:HG4_Ill_Krunchall_1174:HG4_Ill_GATKHC_1318:HG4_Ill_GATKHCSBGrefine_595:HG4_Ill_Cortex_168:HG4_Ill_250bpfermikitraw_1103:HG4_Ill_150bpfermikitraw_1053:HG3_PB_assemblyticsfalcon_1225:HG3_Ill_svaba_1062:HG3_Ill_manta_175:HG3_Ill_Krunchall_1160:HG3_Ill_GATKHC_1404:HG3_Ill_GATKHCSBGrefine_557:HG3_Ill_Cortex_184:HG3_Ill_250bpfermikitraw_1102:HG3_Ill_150bpfermikitraw_1038:HG2_Ill_svaba_1031:HG2_Ill_scalpel_798:HG2_Ill_manta_233:HG2_Ill_SpiralSDKrefine_816:HG2_Ill_Krunchall_1122:HG2_Ill_GATKHC_1343:HG2_Ill_GATKHCSBGrefine_562:HG2_Ill_Cortex_368:HG2_Ill_250bpfermikitraw_1103:HG2_Ill_150bpfermikitraw_998:HG3_PB_HySA_1318;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_998:HG2_Ill_250bpfermikitraw_1103:HG2_Ill_Cortex_368:HG2_Ill_GATKHCSBGrefine_562:HG2_Ill_GATKHC_1343:HG2_Ill_Krunchall_1122:HG2_Ill_SpiralSDKrefine_816:HG2_Ill_manta_233:HG2_Ill_scalpel_798:HG2_Ill_svaba_1031:HG3_Ill_150bpfermikitraw_1038:HG3_Ill_250bpfermikitraw_1102:HG3_Ill_Cortex_184:HG3_Ill_GATKHCSBGrefine_557:HG3_Ill_GATKHC_1404:HG3_Ill_Krunchall_1160:HG3_Ill_manta_175:HG3_Ill_svaba_1062:HG3_PB_assemblyticsfalcon_1225:HG4_Ill_150bpfermikitraw_1053:HG4_Ill_250bpfermikitraw_1103:HG4_Ill_Cortex_168:HG4_Ill_GATKHCSBGrefine_595:HG4_Ill_GATKHC_1318:HG4_Ill_Krunchall_1174:HG4_Ill_manta_203:HG4_Ill_svaba_1025:HG4_PB_assemblyticsfalcon_1227;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0530973;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.0720721;PBcalls=8;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=22530;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=57;REFWIDENED=1:158851654-158851766;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:28:0|1:31:1:0:27:0|1:26:2:0:21:0/1:21:28:./.:.:.:.:.:.
chr1	158867530	HG3_Ill_SVrefine2DISCOVARDovetail_558	AGATCTATGTACCAAATAAGGACTAAAGTTAGTAAAATAGTACTAGGAATTTTTGTTAAATAAGTAGATTTTAGCTTTTCTTGTCACAAAAAAGTAGCTGTTTCAGATTATTAATATATTCATCTGCTTCACTCTAGTAATCATTTTACTATCTATATTATACCCACACTTCACATTGTAAACCTCAAATATACACAATAAAATCTATTTTTTAAAAATTCTGCATCAAGCAATATTGTACTGAGTGGTATAAATAGTGGGTATAAATAGCCTGACATTAGTTCAATTCTGACTTTGCTTCCAAGTAAGTACTGATTGAAAATATTTTTTTAAGTAATAAATTTTTTGAGCTTTAAGAATTTTGTAATTATGAGTAATGATTTGGCTAGATGTGCCTTAAATATCACTCCAGTCTCCAGATTTCTGCTGTCAGTCTGAGTTTGATTCCGTTGTATATGATGTGTTCTTTATCTCTAGGTGCTTCTTCTTGCTGGTGTCCTTTTAATTACATTATGTGTGTAGGTGGTTGTTTATGTTTCCTTCTACCCAGTTTGGCACATTGTATTTTTTTATTGAGAACACTTATCTCTCTTTAATTCTTGGCATTTACCGATGTATTTTATTCACATACACCTCCCCTAATCCCTTCTACATGTTCCTTTTCTCCTAAAATTACTGCTATTGGGATGTTGACAACTCTATACTTTTTGTCTTTTATGTTTTCTTTTATTATTTCAACTTTTTTCTGTTTTGCTGCTTCCTTCTGTGGGAGTTACTCAATATGAACCTCTAATTAAGAAATACAATTTTTTTTTCCATTCCATAATCTAACCAATGCCTTGTATTCTTTATTTTGACTACCACATTTTATTAGTGGATATTTCCGCTTGACTATTTTATGATTTCTTTTTCTTATTTTAGCTGCTAATTAGGTATATTTGGCTTACTGATTTTAAAATCATGCTTCCTCTATTATTGTATTTGAGTTCAATAGGTACATGCTGTTTGGTTTGCAGTTTTACTTTCAAGGTAATCATTAAGGTTTTTGTTGTTGTTGTTAGATAAATTTGCTCTTCAGATATATACACAGCATTCCCTGTGACCTCATAGCCCCATAAAGGAATGTACTACATTGTTTGGTAAAGTCTTTTGCTTGGTAAAGTCTAATAGCCCAAAGGCAAATTTTGCATTTGGGACAGTCAGACATTAGGAAGATGATTTCAGAAGCAACAAGTTCAGACACCGCAAAACCACAGTTAATCTCACCATTCCAGGCAAAGTATTAATCATAGTTTAAATTTTAAATCTTTAAAAGGATTATCTTTAGGAAAAGTCAACTTCTCTGTGCGATAATACACCAGCACCAGGGCTATGAGGGATAATGGTGGAAGAATAATTTACACTTGTTCTATCTGCTGCTTATCCTGACCTATCTCTTGCTTTGTCCTAGTTTCGTCCTTGTAGACTCCGGTATCAGGGCCTCTGTGGGGAACTGACAAGCAAAGACTGCTGTAAGGCAACATGAGGAATAAACAAGACTTTACTGTTTAAAAATGTTCTAAATGAAGCCCCCAGATGTTCTCTGCTCCAAGCTGCAGCCTCCACCCACAACCCACACAGAAGACACTAAGACAAAGACTTTGCTATAGTTAGGGAGTCTCTCAAAGAATTTTGCTTGTTTGTTAAATCTAAAAATCTCTTCTTACTCTGTAGTTTCTCCAAATTTTATTTAAAAACTTGGGGAACAGAGCCAGCAGCCTGTGCCTGTTAGCCATGTAGGCTTAGGTGGTCACAGATGGAGCCCTTTTTCATCATTGCCACTTTAAGCCCATTATTTCTTGGCCACCTCAATGATGTAAGTGAACATCTCAAGACAGCTCTACTTTTCCAATATGTGCTGTCTTGATAGTATATGATGGGACACTTTCTAAGGCCCTGCCTGCTTAAACATGCCACACAGAAAATTTAGGGTTATTGAATTGTTGCTATTCCTATCATTTTGTCAGAGTACTTAAGTAGGTAGGGATATATTACAAATTTATAATACTATTCTTACATTTCCTAAAGTGTCTTTATGGCAATACTGTTATCCAGACTTTATATTGAGTAATGAATCCCATTCATCCAAGAAGTCTAACTGAGGAGGCATATTGCTCAGTTAAGTGATGACTATATAAGTGCATGAATTAATTTTGCCAACTTAGTATCCCACAATGAAGGATTCTATTCTAGCACTTAGGCATAGGAGGTGTAGAAGTTTTTAATTTTACTATGCCCAAGACGCTACTTCTATTTCCTTCTCAAAGAATACAGGCCTTACTCACATATTTTTATTTTTAAATTTTAGGGCCTAATAGGGACATTAAAGGTCCTAAATGCTGTTTCTTGGAGAAATTTCTCTTTTACTTGCTCACATTCTTCTCTGTAAGAGACTTCTGTCACTTTCCAGACT	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_1123:HG3_10X_allpass_164:HG4_Ill_MetaSV_273:HG4_PB_pbsv_894:HG4_PB_assemblyticsfalcon_1228:HG3_PB_assemblyticsfalcon_1226:HG2_PB_assemblyticsPBcR_1243:HG2_PB_assemblyticsfalcon_1269:HG4_10X_allpass_144:HG2_10X_allpass_139:HG2_PB_pbsv_884:HG3_Ill_MetaSV_237:HG2_Ill_MetaSV_252:HG2_Ill_tnscope_92:HG4_PB_SVrefine2PBcRDovetail_502:HG4_PB_SVrefine2Falcon1Dovetail_559:HG4_Ill_SVrefine2DISCOVARDovetail_635:HG3_PB_pbsv_898:HG3_PB_SVrefine2PBcRDovetail_522:HG3_PB_SVrefine2Falcon1Dovetail_520:HG3_Ill_SVrefine2DISCOVARDovetail_558:HG3_Ill_GATKHCSBGrefine_558:HG2_PB_SVrefine2PBcRplusDovetail_608:HG2_PB_SVrefine2PB10Xhap12_727:HG2_PB_SVrefine2Falcon2Bionano_167:HG2_PB_SVrefine2Falcon1plusDovetail_607:HG2_Ill_SpiralSDKrefine_817:HG2_Ill_SVrefine2DISCOVARplusDovetail_693:HG2_10X_SVrefine210Xhap12_678:HG2_PB_HySA_1652:HG3_Ill_Krunchall_1161;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_678:HG2_Ill_SVrefine2DISCOVARplusDovetail_693:HG2_Ill_SpiralSDKrefine_817:HG2_PB_SVrefine2Falcon1plusDovetail_607:HG2_PB_SVrefine2Falcon2Bionano_167:HG2_PB_SVrefine2PB10Xhap12_727:HG2_PB_SVrefine2PBcRplusDovetail_608:HG3_Ill_GATKHCSBGrefine_558:HG3_Ill_SVrefine2DISCOVARDovetail_558:HG3_PB_SVrefine2Falcon1Dovetail_520:HG3_PB_SVrefine2PBcRDovetail_522:HG3_PB_pbsv_898:HG4_Ill_SVrefine2DISCOVARDovetail_635:HG4_PB_SVrefine2Falcon1Dovetail_559:HG4_PB_SVrefine2PBcRDovetail_502;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0358077;ClusterMaxSizeDiff=0.0358077;ClusterMaxEditDist=0.047073;PBcalls=16;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2451;DistBack=13207;DistForward=-2451;DistMin=-2451;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:158867531-158869984;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:70:0|1:32:0:2:35:0|1:89:0:0:30:0/1:69:11:0/1:222:85:2544:.:.
chr1	158961351	HG2_Ill_SVrefine2DISCOVARplusDovetail_694	CTCTGTCTCACAAAAAAAAAAGAAAAGGAAATCTTTGGCCACACATGGTGGTTCATGCCTGTAATCCCAGCACTTTGGGGGGCCAAGGCGGGTGGATCACTTGAGGCCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTGACCGGGCATGGGGCAGATGCCTATAATCCCACCTACTTAGGAGGCTGAGGAGGGAAAATCACCTGAATCTGGAAGGCAGAGGTTGCAGTGAGCCAAGATGGTGCCATTGCACTCCAGCCTGGGCCACAAGAGTGAGACACTGTCTCAAACAAACAAACAAACAAACAAAAAACCAGGATAACAAACACAAACACAAGTCTATTACATAGTCGTACATTTCTCAGCTTTGTCTTTAAATGCAAAGGCTGACCAAAAAGCTAGCAGTGCTGCAAATGTGATGCCCAGACCAGCACCTCAGGGCTCCATTCTCTGTTTCCATTATCAGCCTACACATGTGTGGACCTGCCTCACTCCATTAGGGCAATAGGAATATTCCATCCACCTGTGCTAGTTGAGTAACGCAAATGACCTCTGACCTGGTTTTCTCTACTGGCCTTTCACTTTGGAGTTCAGTAGTGTATGTCAAGTTTGTTAACTTAAACCACACACACACACACACACATACACAATTTGTCTCTGGCCAAGGCCAGAGACAGGCACTTCAAAGGAGGAGGGGTTGGGGTAAGAGCTTTATGCTGAATAGACAGGCTAAACATACATATTCAACAGGTTACAGAAAGAGCTATAAATATGCACGAAGGTGGTTGCCCAAAGCTGTGGGGTCCCATCTCTTGCTTCAGCATGACCTGGATGTGAGACATGGAGTATAACATTTTGGAACTTTAAGGTTTAACGACTACTCTATTGGATTTTGGACTTGCATGGGGCATGCGGCCCTTTTGTTTTTGTCAATATCTCTTATTTGGAACGAATGTATTTACCCAATACCTGTAGCCCCATTGTATCTAGGAAGTAACTAACTTGCTTTGGATTTCATAGGCTCATAGGTGGAAGGGACTTGACTTGTCTCAGGTGAGACTTTGAACTTGGAATTTTGTGTTAATGCTTGAATGAGTTAAGAATTTGGGGGACTGTTGGAAGGGCATGATTGTGTCTTGAACTGTGAGGACATGAGATTTGGGAGGAACCATGGGCTAAGTGATAAGGTTTGGCTCTGTGTCCCCACCCAAATCTCACCTTGAATTGTAATAATTGCCATGTGTCATGGAAGGGACCCAGTGGGAGGGTAATTGGATCATGAGGACAGTTTCCCCCATGCTGTTCTTGTGATAGTGAGGGACTTCTTACGAGATCTGATGGTTCCATAAGGGGCTTCCCCCTGTGCTTGGCACTCATTCTCTCTCCTGCTGCCCTGTGAAGAGGTGCTTTCCGCTATGATCGTAATTGTCGTGAGGCCTCCCAGCCATGCTGAACTGTGAGTCAATTAAGCCTCTTTCCTTTATAAATTACCCAGTCTTGCATATGTCTTTATTAGCAGTGTGAGAATGAATTAGTCAGTAGTCTTGACACATGCACATGCATACAGAACAAACATTCATGTAGTATATGACCCATGTTCACTTTGTGGTGTAGAGTTAATATTGAAATGTATTACAATTAGAACATATACATCAAAAGGTCTTTTCAGGACACAAAGGTACACAATTGCACAGTCTCTGCAAACTGGCCAGTCAGCCCATGTTTGGTCATCTTCTTATCAGGATAACAATATTGAAATCAGTATTTTGTCCAATCAAAGCTGTAGCTATGGCTGATGGAACAGGAGCTCAGTTAATCAGCACCTGTGAGCTGGATGAGTTGTAATTGTTTTAATATTGCTTATTTCAAGGTCAGTGCTTGTTTGGCTGCTAGATATTTAAAAAAATAACTTTGTCACACTTAGACCATAGTTTATCCTTTTTTAAACATTTATTTTAGGTTCAGGGTTACATTTGCAGGTTTGTTATATAGTTAAACTCATGTCACAGGAGTTGGTTGTACAGATCATTTTGTCACCCAGGTACTAACCCTAGTACCCAATGGTTATTTTTTCTAATCCTCTCCCTCCTCCAACTCTCTACCCTCAGGTAAACCCCAGTGTATGTTGTTCCCTTCTTTGTATCCATAAGTTCTCATCATTTAGATCCTGCTTATAAGTGAGAACATGTTGTATTTGGTTCTCTGTTACTGTGTTAGTTTGCTAAGGATAATGGCCTCCAGCTGCATTTATGTTCCCACAAAAGACATAATCTTACTCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATATACCACATATTCTTTATCCAGTCTACCACTGATGGGCATTTATGTTGATTCCATGTCTTTGCTATTGTGAATAGTGCTGCAATGAACATTCACATGCATGTGTCTTTATGGTAGAATGATTTATCTTCCTTCATGTATGTACCCAGTAGTGAGATTGCTGGGTTGAATAGTAGTTCTGTTTTTGGCTGTTTGAGAAAACACCACACTGCTTTCCACAATAGTTGAACTAATTTACACCCCACCAACAGTGTATAAGCATTCCTTTTGCCCCACAACCTTGTCAGCATGTTATTTTTTGATTTTTTAATAATAACCATTTGGGCCAGGGGCGGTGGCTCACATCTGTAATCTCAGCACTTTCAGTGGCCAAGGTGGGTAGATCACCTGAGGTCAGGAGTTCAAGACCAACCTGGCCAACATGACAAAGCCCTGTCCCTACTAAAAATATAAAAAGTAGCTGGGCGCAGTGGCGGGCACCTGTAATCTCAGGTACTAGGGAGGCTGAGGCAGGAGAATTGCTTGAGCTCAGGAGGCAGAGGTTGCAGTGAGCCGAGATTTCACCACTGCATTCCACCTTGGGTGACAGAATGAGACTCCATCTCAAAAAAAAAAAAAAATTAAAAATTAAAAATAAAATAATAGCCATTCTGACTGGTGTGAGATATATCTCATTGTGGTTTTGATTTGCATTTTTCTCATGATCAGTCCTATTGAGCTTTTACTCATGTGCTTTTTGGCCACACATATGTCTTCTTTGAAAAACATCTGTTCACATTCTTTGCCCGCTTTTCAACAAGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTAAGTTCCTTATAGATGCTGGATATTAGACATTTGTCAGATGCATAGTTTGCAAAATTTTCTTTTATTCTATAGATTGTCTGTTTACTCTGTTGATAGTTTCTTTTGCTGTACAGAAGCTCTTACGTTTAATTAGATTCCATTTTTCAATTTTTGCTTTTGTTATGATTGCTTTTGGCATCTTTGTTATGAAATCTTTGACCGTTCCTATGTCCAGATGGTATTGCCTAAGTTGTCGTCAGGATTTTTATAGTTTTGGGTTTTACATTTAAGTCTTTAATCCAGCTTGAGTTGATTTTTGTATATGGTATAAGGAAGAGGTCTAGTTTCAATCTTGTTCGTATGGGTAGCCAGTTCTCCTAGCACCATTTATTGAAAAGGGAGTCCTTTCCCCATTGCTTGCTTCTGTCAGCTTTGCCAAAGATCAGATGGTTGTAGGTGTACGGCCTTATTTCTGAGCTATCTATTCTGTTCCACTGGTCTGTGTATCTGTTTTTGTACCAATGCCATGCTGCTTTGGTTACTGTAGCCCTGTAGTATGTTTGCAGTCAGGTAACATGATGCCTCCAGCTTTATTCCTTTTGCTTAGGATTGTCTTGGCTATTCGGGCTCTTTTTTGATTCCATATTAATTTTAGAGTAGATTTTTCTAGTTCTGTGAAGAATGTCAATGGTAATTTGATAGGAATAGCATTGAATCTGTAAATTGCTTTGGGCAGTATGGACATTTTAGTGAAATTAATTCTTCTTATCCATGAGCGTGAAATGTTTTTCAATTTGTTTGTGTCATCTCAGATTTCTTTGAGAAGTGTTCTATAACCCTCAATGTAGAAATCTTTCACCTTCCTGGTTAGCTGTATTCCTGGGTATTTTATTCTTTTATTGGCAGTTGTGAATGGGATTGAATTCCTGTTTTGGCGCTCCGGTTGGCAGTTGTTAGTGTATAGGAATACTACTTATTTTTGTACATTGATTTTGTATCCTAAAACTTTGCTGAAGTTGTTTATCAGCTGATAGAGCTTTGGGGCTGAGACTATGGTTTTTTAGATATAGAATCATGTTATCTGCAAAAAAGGATAGTTTGACTTACTCTTGCCCTTTATTGTTTTTTCTCTTGCCTAATTCCTCTGGCCTGGACTGGAAGTACTAGAACATTATTTATTCTTTAAGTGTTGGAGTGCACGACTTAATCTTTGCCTGGCATGGCCCTAGGTCCTGTGTATAATTTGGTATTTTTTGGCCATGAAGAGTCTGTTCTGTCAGTTTTATGATCTCTGTTTTAACAATCCTGATCAGTTGTTGTGTCTAAACCATAAAAGGGAGGTAGGGTATAGTGAAGTGTGTCTGACCTCCCACCCATCATGGCCAGAAACTCAGTTTTAAGGTTTTCCTGGGGTCCCCTTGGCCAAGAAGGGATCTGTTCAGTCAGTGAAGGGCTTAACATTTTACTTTTCATTGATAAGCCACACGTCTTTCTCCATGCTTTTTGTATGTGTGGAACAGTCCTCAGTTACCTGGACCCAGGTGTTTCTAACTTAGGGGTTCATCAATCATGCCCTGTCAGGTTCTGTAGATTCAACTAGAACTGGCCAGAGCTGCTGACACCAGTGTGCATAGCCTTCCTTACAAAGGGCCATTTGTCTAGCCACCAAAGCCACCTTTTGCACTCAATGTGCACTGAT	C	20	PASS	ClusterIDs=HG4_Ill_MetaSV_274:HG3_10X_allpass_165:HG2_PB_PB10Xdip_651:HG4_10X_allpass_145:HG3_PB_HySA_1320:HG2_PB_assemblyticsfalcon_1271:HG4_Ill_Krunchall_1177:HG2_Ill_Krunchall_1126:HG2_10X_allpass_140:HG2_PB_HySA_1654:HG2_Ill_tnscope_93:HG4_PB_pbsv_895:HG4_PB_SVrefine2PBcRDovetail_503:HG4_Ill_SVrefine2DISCOVARDovetail_636:HG3_PB_pbsv_899:HG3_PB_SVrefine2PBcRDovetail_523:HG3_Ill_MetaSV_238:HG2_PB_pbsv_885:HG2_PB_assemblyticsPBcR_1245:HG2_PB_SVrefine2PBcRplusDovetail_609:HG2_PB_SVrefine2PB10Xhap12_729:HG2_PB_SVrefine2Falcon2Bionano_168:HG2_PB_SVrefine2Falcon1plusDovetail_608:HG2_Ill_SpiralSDKrefine_818:HG2_Ill_SVrefine2DISCOVARplusDovetail_694:HG2_Ill_MetaSV_253;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_MetaSV_253:HG2_Ill_SVrefine2DISCOVARplusDovetail_694:HG2_Ill_SpiralSDKrefine_818:HG2_PB_SVrefine2Falcon1plusDovetail_608:HG2_PB_SVrefine2Falcon2Bionano_168:HG2_PB_SVrefine2PB10Xhap12_729:HG2_PB_SVrefine2PBcRplusDovetail_609:HG2_PB_assemblyticsPBcR_1245:HG2_PB_pbsv_885:HG3_Ill_MetaSV_238:HG3_PB_SVrefine2PBcRDovetail_523:HG3_PB_pbsv_899:HG4_Ill_SVrefine2DISCOVARDovetail_636:HG4_PB_SVrefine2PBcRDovetail_503:HG4_PB_pbsv_895;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0279051;ClusterMaxSizeDiff=0.0279051;ClusterMaxEditDist=0.0279051;PBcalls=14;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-4850;DistBack=14672;DistForward=-4847;DistMin=-4847;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=1:158961352-158966205;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:52:./.:17:14:14:9:0|1:62:0:0:21:0/1:36:9:0/1:352:163:4854:.:.
chr1	159648707	HG2_PB_SVrefine2Falcon1plusDovetail_609	ATGGCAAAGACTGTCTCATTCAAGTCTTTAGCTATAGGGTTTCATTCAATAAGAGGCTCTCAGTAAATACGTATTAGATCAGTGGGGGAGTAGATGAAAAAACTGAAGGATTTCCTGAAATTTTTACGGAAGTGTTTCTGTTTTCATTGCTGTCATTCTTAATATTTTCTCATGACGCATCATATCCCTTTACTTATCTGTAACTTACAAAGTCTTTTTGTGTTGGGTTTGCAGGACTACAAAAATGTGTCTCAGGACACATTGACAATGGGGATTCCCACCTCTGTAATCTTTTGTAGGCAGCTGCTTATCTCCTCTGTACTACAAATGTCAGAGAAAACTTCCCATTGTCAATATTCCCTCACGCCTTGTACTGATACCTCTAGAAACGCTTTAAGTGCCCCAGTGCCTTTTATAGTAGATGGAGCAGAAATGGCAATAGGCATCCTCCACATCAGTATTTATCCCCATGATTTTGTCTTTCTTGTTCCTTACTGACACTCTCTGTTTCTTCTCTAACTCTTCTGTTGCTTCCTGCAACTTGAGCCTAATTCTATTCCTACTGGGTGCTCCTGGCTAAAGGTCATCCTGCCCTGTTGACACCAAGTGTATATGATCCTCCACGCCCTATTGCAAAAGCTTAGGAAGGGGGCTGCTCATTGGGTTTTTAATCTCCTCCAAAGCCCCTTTATTGCTGTTTATCCTGGGTCCATTTCCTTAGTTCCAGGACCTGCTTCAGAGATCGGCCTCCCCATCCTCTCAAGACAGCCATCTGTCTTGGTCACCGCACACTCCCTGCCTCTCAGTGAGAGCCACACTTAACTTTGTATCAGAGAGACTGCATGTCTTTTATTGAAATATCTTAGACCCACATCCTGATACCAAACATTCTCATAACGCTGTATTTTCTCTCCTACCTGAAGCATGAAGTTTTCATATCATCTCAGATCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_254:HG2_Ill_tnscope_94:HG4_PB_pbsv_897:HG4_PB_assemblyticsfalcon_1231:HG4_PB_SVrefine2PBcRDovetail_504:HG4_PB_SVrefine2Falcon1Dovetail_560:HG4_Ill_manta_204:HG4_Ill_SVrefine2DISCOVARDovetail_638:HG4_Ill_MetaSV_276:HG4_Ill_GATKHCSBGrefine_598:HG4_Ill_Cortex_170:HG4_10X_allpass_146:HG3_PB_assemblyticsfalcon_1230:HG3_PB_SVrefine2PBcRDovetail_525:HG3_PB_SVrefine2Falcon1Dovetail_521:HG3_Ill_manta_176:HG3_Ill_SVrefine2DISCOVARDovetail_561:HG3_Ill_GATKHCSBGrefine_561:HG3_Ill_Cortex_185:HG3_10X_allpass_166:HG2_PB_pbsv_887:HG2_PB_assemblyticsfalcon_1274:HG2_PB_assemblyticsPBcR_1248:HG2_PB_SVrefine2PBcRplusDovetail_610:HG2_PB_SVrefine2PB10Xhap12_730:HG2_PB_SVrefine2Falcon2Bionano_169:HG2_PB_SVrefine2Falcon1plusDovetail_609:HG2_Ill_manta_234:HG2_Ill_SpiralSDKrefine_819:HG2_Ill_SVrefine2DISCOVARplusDovetail_699:HG2_Ill_GATKHCSBGrefine_565:HG2_Ill_Cortex_373:HG2_10X_allpass_141:HG2_10X_SVrefine210Xhap12_681:HG4_Ill_Krunchall_1178:HG3_PB_pbsv_901:HG2_Ill_breakscan11_110:HG2_Ill_Krunchall_1127:HG3_Ill_MetaSV_240;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_681:HG2_10X_allpass_141:HG2_Ill_Cortex_373:HG2_Ill_GATKHCSBGrefine_565:HG2_Ill_SVrefine2DISCOVARplusDovetail_699:HG2_Ill_SpiralSDKrefine_819:HG2_Ill_manta_234:HG2_PB_SVrefine2Falcon1plusDovetail_609:HG2_PB_SVrefine2Falcon2Bionano_169:HG2_PB_SVrefine2PB10Xhap12_730:HG2_PB_SVrefine2PBcRplusDovetail_610:HG2_PB_assemblyticsPBcR_1248:HG2_PB_assemblyticsfalcon_1274:HG2_PB_pbsv_887:HG3_10X_allpass_166:HG3_Ill_Cortex_185:HG3_Ill_GATKHCSBGrefine_561:HG3_Ill_SVrefine2DISCOVARDovetail_561:HG3_Ill_manta_176:HG3_PB_SVrefine2Falcon1Dovetail_521:HG3_PB_SVrefine2PBcRDovetail_525:HG3_PB_assemblyticsfalcon_1230:HG4_10X_allpass_146:HG4_Ill_Cortex_170:HG4_Ill_GATKHCSBGrefine_598:HG4_Ill_MetaSV_276:HG4_Ill_SVrefine2DISCOVARDovetail_638:HG4_Ill_manta_204:HG4_PB_SVrefine2Falcon1Dovetail_560:HG4_PB_SVrefine2PBcRDovetail_504:HG4_PB_assemblyticsfalcon_1231:HG4_PB_pbsv_897;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0412371;ClusterMaxSizeDiff=0.0412371;ClusterMaxEditDist=0.0412371;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=14;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-950;DistBack=9715;DistForward=58854;DistMin=9715;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:159648708-159649658;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=188.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:19:0:9:1/1:0:37:0:37:1/1:0:35:./.:3:55:.:.:.
chr1	160935020	HG2_Ill_GATKHCSBGrefine_566	CAAAACTACAGTGAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_111:HG2_PB_assemblyticsfalcon_1280:HG2_PB_assemblyticsPBcR_1253:HG4_PB_pbsv_899:HG4_Ill_Krunchall_1183:HG2_PB_pbsv_889:HG2_Ill_Krunchall_1132:HG3_Ill_Spiral_885:HG2_Ill_Spiral_50:HG2_PB_HySA_1661:HG3_PB_pbsv_903:HG4_PB_HySA_1283:HG2_Ill_tnscope_95:HG2_Ill_MetaSV_255:HG4_PB_assemblyticsfalcon_1234:HG4_PB_SVrefine2PBcRDovetail_506:HG4_PB_SVrefine2Falcon1Dovetail_563:HG4_Ill_scalpel_765:HG4_Ill_SVrefine2DISCOVARDovetail_641:HG4_Ill_MetaSV_277:HG4_Ill_GATKHCSBGrefine_599:HG4_10X_allpass_147:HG3_Ill_MetaSV_241:HG3_Ill_GATKHCSBGrefine_562:HG3_10X_allpass_167:HG2_PB_SVrefine2PBcRplusDovetail_612:HG2_PB_SVrefine2PB10Xhap12_733:HG2_PB_SVrefine2Falcon2Bionano_171:HG2_PB_SVrefine2Falcon1plusDovetail_612:HG2_Ill_scalpel_801:HG2_Ill_manta_235:HG2_Ill_SVrefine2DISCOVARplusDovetail_704:HG2_Ill_GATKHCSBGrefine_566:HG2_10X_allpass_142;NumClusterSVs=34;ExactMatchIDs=HG2_10X_allpass_142:HG2_Ill_GATKHCSBGrefine_566:HG2_Ill_SVrefine2DISCOVARplusDovetail_704:HG2_Ill_manta_235:HG2_Ill_scalpel_801:HG2_PB_SVrefine2Falcon1plusDovetail_612:HG2_PB_SVrefine2Falcon2Bionano_171:HG2_PB_SVrefine2PB10Xhap12_733:HG2_PB_SVrefine2PBcRplusDovetail_612:HG3_10X_allpass_167:HG3_Ill_GATKHCSBGrefine_562:HG3_Ill_MetaSV_241:HG4_10X_allpass_147:HG4_Ill_GATKHCSBGrefine_599:HG4_Ill_MetaSV_277:HG4_Ill_SVrefine2DISCOVARDovetail_641:HG4_Ill_scalpel_765:HG4_PB_SVrefine2Falcon1Dovetail_563:HG4_PB_SVrefine2PBcRDovetail_506:HG4_PB_assemblyticsfalcon_1234;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0936995;ClusterMaxSizeDiff=0.0936995;ClusterMaxEditDist=0.0936995;PBcalls=14;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=5;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=21966;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:160935021-160935351;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:5:16:1:20:1/1:1:25:0:12:1/1:0:45:0/1:3:10:.:.:.
chr1	162052665	HG4_10X_allpass_149	TGTGTCCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_694:HG4_Ill_Krunchall_1189:HG3_PB_pbsv_908:HG3_Ill_Krunchall_1181:HG2_Ill_Krunchall_1143:HG3_PB_HySA_1338:HG4_PB_assemblyticsfalcon_1242:HG3_PB_assemblyticsfalcon_1243:HG2_PB_assemblyticsfalcon_1290:HG2_PB_assemblyticsPBcR_1268:HG2_PB_pbsv_897:HG2_Ill_breakscan11_113:HG4_PB_HySA_1307:HG3_Ill_MetaSV_246:HG2_Ill_tnscope_96:HG2_Ill_MetaSV_259:HG4_PB_pbsv_908:HG4_PB_SVrefine2PBcRDovetail_511:HG4_PB_SVrefine2Falcon1Dovetail_568:HG4_Ill_scalpel_773:HG4_Ill_manta_206:HG4_Ill_SVrefine2DISCOVARDovetail_647:HG4_Ill_GATKHCSBGrefine_607:HG4_10X_allpass_149:HG3_PB_SVrefine2PBcRDovetail_532:HG3_PB_SVrefine2Falcon1Dovetail_528:HG3_Ill_scalpel_881:HG3_Ill_manta_177:HG3_Ill_SVrefine2DISCOVARDovetail_573:HG3_Ill_GATKHCSBGrefine_571:HG3_10X_allpass_169:HG2_PB_SVrefine2PBcRplusDovetail_617:HG2_PB_SVrefine2PB10Xhap12_738:HG2_PB_SVrefine2Falcon2Bionano_175:HG2_PB_SVrefine2Falcon1plusDovetail_618:HG2_Ill_scalpel_810:HG2_Ill_manta_237:HG2_Ill_SpiralSDKrefine_835:HG2_Ill_SVrefine2DISCOVARplusDovetail_711:HG2_Ill_GATKHCSBGrefine_576:HG2_10X_allpass_143;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_694:HG4_PB_pbsv_908:HG4_PB_SVrefine2PBcRDovetail_511:HG4_PB_SVrefine2Falcon1Dovetail_568:HG4_Ill_scalpel_773:HG4_Ill_manta_206:HG4_Ill_SVrefine2DISCOVARDovetail_647:HG4_Ill_GATKHCSBGrefine_607:HG4_10X_allpass_149:HG3_PB_SVrefine2PBcRDovetail_532:HG3_PB_SVrefine2Falcon1Dovetail_528:HG3_Ill_scalpel_881:HG3_Ill_manta_177:HG3_Ill_SVrefine2DISCOVARDovetail_573:HG3_Ill_GATKHCSBGrefine_571:HG3_10X_allpass_169:HG2_PB_SVrefine2PBcRplusDovetail_617:HG2_PB_SVrefine2PB10Xhap12_738:HG2_PB_SVrefine2Falcon2Bionano_175:HG2_PB_SVrefine2Falcon1plusDovetail_618:HG2_Ill_scalpel_810:HG2_Ill_manta_237:HG2_Ill_SpiralSDKrefine_835:HG2_Ill_SVrefine2DISCOVARplusDovetail_711:HG2_Ill_GATKHCSBGrefine_576:HG2_10X_allpass_143;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0923567;ClusterMaxSizeDiff=0.0923567;ClusterMaxEditDist=0.0923567;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-321;DistForward=7845;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:162052666-162053000;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:77:1/1:0:36:1:40:1/1:0:22:0:26:1/1:0:56:0/1:3:9:.:.:.
chr1	164989699	HG2_PB_SVrefine2PB10Xhap12_747	ATTGATGGTCTTTACAATTTGACATGTTTTTGCAGTGGCTGGTACCGGTTGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_706:HG3_PB_pbsv_921:HG2_PB_pbsv_910:HG2_PB_HySA_1722:HG4_PB_pbsv_923:HG4_PB_assemblyticsfalcon_1272:HG4_Ill_svaba_1062:HG4_Ill_SVrefine2DISCOVARDovetail_664:HG4_Ill_GATKHC_1370:HG4_Ill_GATKHCSBGrefine_613:HG3_PB_SVrefine2Falcon1Dovetail_539:HG3_Ill_svaba_1096:HG3_Ill_SVrefine2DISCOVARDovetail_587:HG3_Ill_GATKHC_1457:HG3_Ill_GATKHCSBGrefine_580:HG3_Ill_250bpfermikitraw_1149:HG2_PB_SVrefine2PBcRplusDovetail_626:HG2_PB_SVrefine2PB10Xhap12_747:HG2_PB_SVrefine2Falcon2Bionano_183:HG2_PB_SVrefine2Falcon1plusDovetail_628:HG2_Ill_svaba_1065:HG2_Ill_manta_239:HG2_Ill_SVrefine2DISCOVARplusDovetail_727:HG2_Ill_GATKHC_1398:HG2_Ill_GATKHCSBGrefine_583:HG2_Ill_250bpfermikitraw_1154;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_706:HG4_Ill_svaba_1062:HG4_Ill_SVrefine2DISCOVARDovetail_664:HG4_Ill_GATKHC_1370:HG4_Ill_GATKHCSBGrefine_613:HG3_PB_SVrefine2Falcon1Dovetail_539:HG3_Ill_svaba_1096:HG3_Ill_SVrefine2DISCOVARDovetail_587:HG3_Ill_GATKHC_1457:HG3_Ill_GATKHCSBGrefine_580:HG3_Ill_250bpfermikitraw_1149:HG2_PB_SVrefine2PBcRplusDovetail_626:HG2_PB_SVrefine2PB10Xhap12_747:HG2_PB_SVrefine2Falcon2Bionano_183:HG2_PB_SVrefine2Falcon1plusDovetail_628:HG2_Ill_svaba_1065:HG2_Ill_manta_239:HG2_Ill_SVrefine2DISCOVARplusDovetail_727:HG2_Ill_GATKHC_1398:HG2_Ill_GATKHCSBGrefine_583:HG2_Ill_250bpfermikitraw_1154;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0588235;PBcalls=10;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=17931;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=52;REFWIDENED=1:164989700-164989802;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:80:1/1:2:13:1:13:./.:0:1:1:1:1/1:0:19:./.:.:.:.:.:.
chr1	166047109	HG3_Ill_SVrefine2DISCOVARDovetail_592	AATTATATATATAATAAATATATATAATTTATATATATAATTATATATATAATAAATATATAATAATATATATAATTTATATATATAATTATATATATAATAAATATATATAATTTATATATATA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_928:HG2_PB_HySA_1738:HG4_Ill_GATKHC_1382:HG4_Ill_GATKHCSBGrefine_618:HG3_Ill_GATKHC_1473:HG3_Ill_GATKHCSBGrefine_585:HG2_Ill_GATKHC_1410:HG2_Ill_GATKHCSBGrefine_587:HG4_PB_SVrefine2PBcRDovetail_522:HG4_PB_SVrefine2Falcon1Dovetail_585:HG4_Ill_SVrefine2DISCOVARDovetail_670:HG3_PB_assemblyticsfalcon_1291:HG3_PB_SVrefine2Falcon1Dovetail_544:HG3_Ill_manta_182:HG3_Ill_SVrefine2DISCOVARDovetail_592:HG2_PB_assemblyticsfalcon_1333:HG2_PB_assemblyticsPBcR_1309:HG2_PB_SVrefine2PBcRplusDovetail_632:HG2_PB_SVrefine2PB10Xhap12_753:HG2_PB_SVrefine2Falcon2Bionano_188:HG2_PB_SVrefine2Falcon1plusDovetail_633:HG2_PB_PB10Xdip_693:HG2_Ill_manta_243:HG2_Ill_SVrefine2DISCOVARplusDovetail_733:HG2_10X_SVrefine210Xhap12_716:HG3_Ill_MetaSV_250:HG2_Ill_SpiralSDKrefine_861:HG3_PB_HySA_1378:HG4_PB_assemblyticsfalcon_1288:HG4_Ill_GATKHC_1381:HG4_Ill_GATKHCSBGrefine_617:HG2_PB_pbsv_917:HG2_10X_allpass_145:HG4_Ill_svaba_1075:HG3_Ill_Krunchall_1216:HG4_PB_pbsv_930:HG2_Ill_MetaSV_267:HG3_Ill_250bpfermikitraw_1168:HG3_Ill_150bpfermikitraw_1100:HG2_Ill_250bpfermikitraw_1165:HG2_Ill_150bpfermikitraw_1057;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_716:HG2_Ill_SVrefine2DISCOVARplusDovetail_733:HG2_Ill_manta_243:HG2_PB_PB10Xdip_693:HG2_PB_SVrefine2Falcon1plusDovetail_633:HG2_PB_SVrefine2Falcon2Bionano_188:HG2_PB_SVrefine2PB10Xhap12_753:HG2_PB_SVrefine2PBcRplusDovetail_632:HG2_PB_assemblyticsPBcR_1309:HG2_PB_assemblyticsfalcon_1333:HG3_Ill_SVrefine2DISCOVARDovetail_592:HG3_Ill_manta_182:HG3_PB_SVrefine2Falcon1Dovetail_544:HG3_PB_assemblyticsfalcon_1291:HG4_Ill_SVrefine2DISCOVARDovetail_670:HG4_PB_SVrefine2Falcon1Dovetail_585:HG4_PB_SVrefine2PBcRDovetail_522;NumExactMatchSVs=17;ClusterMaxShiftDist=0.242424;ClusterMaxSizeDiff=0.242424;ClusterMaxEditDist=0.242424;PBcalls=17;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=11;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-124;DistBack=31129;DistForward=7154;DistMin=7154;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=332;REFWIDENED=1:166046803-166047258;PctSeqSimilarity=0.965;PctSizeSimilarity=0.9688;PctRecOverlap=0.5969;SizeDiff=-4;StartDistance=52;EndDistance=48;GTMatch=0;TruScore=84;MatchId=192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:64:1/1:0:15:0:18:./.:0:6:0:2:1/1:0:43:./.:.:.:.:.:.
chr1	167404234	HG2_PB_SVrefine2Falcon1plusDovetail_636	TCCTCCGGAGCCCTCCTCCAGCCCTTCCTCCAGCCCTTCCTCCGGAGCCCTCCTCCAGCCCTTCCTCCAGCCCTTCCTCCGGAGCCCTCCTCCAGCCCTA	T	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_547:HG2_PB_assemblyticsfalcon_1344:HG2_PB_assemblyticsPBcR_1319:HG2_PB_SVrefine2PBcRplusDovetail_637:HG2_PB_SVrefine2PB10Xhap12_758:HG2_PB_SVrefine2Falcon1plusDovetail_636:HG2_PB_pbsv_923:HG4_PB_pbsv_934;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_636:HG2_PB_SVrefine2PB10Xhap12_758:HG2_PB_SVrefine2PBcRplusDovetail_637:HG2_PB_assemblyticsPBcR_1319:HG2_PB_assemblyticsfalcon_1344;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.02;ClusterMaxEditDist=0.0895522;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-99;DistBack=49;DistForward=-70;DistMin=-70;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=368;REFWIDENED=1:167404132-167404598;PctSeqSimilarity=0.9632;PctSizeSimilarity=1;PctRecOverlap=0.06;SizeDiff=0;StartDistance=94;EndDistance=94;GTMatch=0;TruScore=67;MatchId=193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:34:0|1:26:5:2:27:./.:0:1:9:0:./.:3:2:./.:.:.:.:.:.
chr1	168024559	HG2_Ill_SpiralSDKrefine_869	TCAGGCTTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACGAAGAAGTATTTTATTATTTTGCTGCAAAGCTGTTGCTTCACTGTATAAAAATAGCACCAGCAAATGCAGTGTATCGCAAAATTAAGATAGTGGTGTTCCTCATCTGACACTGTACAAGCAACAAAACCTCTTCACTTCCAGTTATTTCCAATGGAAAGATCATTAAGTATTTCATCCCAAATCCAGGTATGGATACATGCAAGTTACAATATTATATAAGGCTTAAGAATAACAATGTTATCTTTGAATTATGTAATTTTTATAACTAGTTTTTACCATGGATAATTTCATGAATTCTGAACACTAGAGCCTAGTCTAAAAATCATAGGATATTGTGAAAAAGACGCATATTATATTTATCTATAATCATTAGAAAGTTAAAGGGCATTTTCTTTCATTAGCAGTGTTAACAGTAGTTTTTTTTTCCCCATCGGTAATACTAAAAGTTTCTATTCTAAGTCTTCTATCCACCACTAATTTAAGACAACTCTGCTGGCTTGCGTTATTTCATACTAGTTTATTTAGGAGTTCCATTTTCACTCCTCAATAGATTTTATGTATTTCTCATATGCTTCTTCACTCATAAGTTCATCTAGTTCTGAAGGGTTACTCAGTGTCATCTTGATCAGCCAACCATCTTCATAACAAGATTTGTTTACAAGTCCTGGATTTTCTGCAAGAGCTTCATTAATTTCAGTTACTTCTCCTGATAAAGGAGAATAGAGTTCACTAGCAGCTTTCACACTTTCCAAAGCACCAAACTCATCTTGTTTGTTCAATTTTGTCCCAACTTCAGGGAGACTACAATAAACAACATCTCCCAACGCTTCCTGTGCAAAATTGCTGATTCCCACTGTTCCAATGCCATTTTCTGTTGTTACCCATTCGTGTTTCTCTGTGAATTTACGCACCGAGAGCAGAGCGGGTCCAGTGCGTAGCGTACGGACGGCGCCCACCCCCAGCTGCCAGGGCCTCGGCGGGCAGGGCGCGGCGGGTGACGGGACCGCGCGCAGGGTGCAGAGCAGGGCCCGCACGCTCCGCACCACTCGCAGCGCCATGTTCGCAGGGGTGCGGGGGTCGCAGCGCTACGCCTCGGCCACCCGCGCCGGGAGGCGGGGCGGGGAGGGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_723:HG2_PB_pbsv_925:HG4_PB_pbsv_935:HG2_Ill_tnscope_98:HG4_Ill_SVrefine2DISCOVARDovetail_680:HG4_Ill_GATKHCSBGrefine_622:HG2_PB_SVrefine2PB10Xhap12_759:HG2_PB_SVrefine2Falcon2Bionano_192:HG2_Ill_breakscan11_115:HG2_Ill_SpiralSDKrefine_869:HG2_Ill_SVrefine2DISCOVARplusDovetail_745:HG2_Ill_GATKHCSBGrefine_590;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_723:HG4_Ill_SVrefine2DISCOVARDovetail_680:HG4_Ill_GATKHCSBGrefine_622:HG2_PB_SVrefine2PB10Xhap12_759:HG2_PB_SVrefine2Falcon2Bionano_192:HG2_Ill_breakscan11_115:HG2_Ill_SpiralSDKrefine_869:HG2_Ill_SVrefine2DISCOVARplusDovetail_745:HG2_Ill_GATKHCSBGrefine_590;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00170358;ClusterMaxSizeDiff=0.00170358;ClusterMaxEditDist=0.00170358;PBcalls=4;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-1173;DistBack=8586;DistForward=51991;DistMin=8586;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:168024560-168025747;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:31:0|1:45:4:2:24:./.:11:28:77:0:0/1:51:26:0/1:96:46:1351:.:.
chr1	169024743	HG4_Ill_GATKHCSBGrefine_625	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_943:HG4_PB_assemblyticsfalcon_1310:HG4_PB_HySA_1368:HG4_PB_SVrefine2Falcon1Dovetail_594:HG4_Ill_svaba_1097:HG4_Ill_manta_215:HG4_Ill_SVrefine2DISCOVARDovetail_682:HG4_Ill_GATKHC_1409:HG4_Ill_GATKHCSBGrefine_625:HG4_Ill_250bpfermikitraw_1180:HG3_Ill_svaba_1134:HG3_Ill_SVrefine2DISCOVARDovetail_604:HG3_Ill_GATKHC_1502:HG3_Ill_GATKHCSBGrefine_592:HG3_10X_allpass_174:HG2_PB_SVrefine2Falcon2Bionano_196:HG2_Ill_svaba_1100:HG2_Ill_manta_245:HG2_Ill_SVrefine2DISCOVARplusDovetail_752:HG2_Ill_Krunchall_1203:HG2_Ill_GATKHC_1433:HG2_Ill_GATKHCSBGrefine_598:HG2_Ill_250bpfermikitraw_1189:HG2_Ill_150bpfermikitraw_1083:HG2_10X_SVrefine210Xhap12_728:HG4_PB_pbsv_943:HG2_PB_pbsv_932:HG2_PB_SVrefine2PBcRplusDovetail_642:HG2_PB_SVrefine2PB10Xhap12_763;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_728:HG2_Ill_150bpfermikitraw_1083:HG2_Ill_250bpfermikitraw_1189:HG2_Ill_GATKHCSBGrefine_598:HG2_Ill_GATKHC_1433:HG2_Ill_Krunchall_1203:HG2_Ill_SVrefine2DISCOVARplusDovetail_752:HG2_Ill_manta_245:HG2_Ill_svaba_1100:HG2_PB_SVrefine2Falcon2Bionano_196:HG3_10X_allpass_174:HG3_Ill_GATKHCSBGrefine_592:HG3_Ill_GATKHC_1502:HG3_Ill_SVrefine2DISCOVARDovetail_604:HG3_Ill_svaba_1134:HG4_Ill_250bpfermikitraw_1180:HG4_Ill_GATKHCSBGrefine_625:HG4_Ill_GATKHC_1409:HG4_Ill_SVrefine2DISCOVARDovetail_682:HG4_Ill_manta_215:HG4_Ill_svaba_1097:HG4_PB_SVrefine2Falcon1Dovetail_594;NumExactMatchSVs=22;ClusterMaxShiftDist=0.197531;ClusterMaxSizeDiff=0.197531;ClusterMaxEditDist=0.209877;PBcalls=9;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-88;DistBack=-155;DistForward=-33;DistMin=-155;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:169024742-169024835;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:25:0|1:26:0:0:28:./.:0:21:20:1:0/1:16:16:./.:.:.:.:.:.
chr1	169160020	HG4_Ill_SVrefine2DISCOVARDovetail_684	AGCAAGTGAACTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_52:HG4_Ill_Krunchall_1255:HG2_Ill_Krunchall_1206:HG2_PB_HySA_1765:HG2_PB_assemblyticsPBcR_1336:HG4_PB_pbsv_945:HG2_PB_pbsv_935:HG4_Ill_MetaSV_288:HG2_Ill_tnscope_99:HG4_PB_assemblyticsfalcon_1314:HG4_PB_SVrefine2Falcon1Dovetail_597:HG4_Ill_scalpel_811:HG4_Ill_manta_216:HG4_Ill_SVrefine2DISCOVARDovetail_684:HG4_Ill_GATKHCSBGrefine_627:HG4_10X_allpass_153:HG3_PB_SVrefine2Falcon1Dovetail_555:HG2_PB_SVrefine2PBcRplusDovetail_644:HG2_PB_SVrefine2PB10Xhap12_766:HG2_PB_SVrefine2Falcon2Bionano_198:HG2_PB_SVrefine2Falcon1plusDovetail_642:HG2_Ill_scalpel_848:HG2_Ill_manta_246:HG2_Ill_SVrefine2DISCOVARplusDovetail_755:HG2_Ill_MetaSV_270:HG2_Ill_GATKHCSBGrefine_600:HG2_10X_allpass_146:HG2_10X_SVrefine210Xhap12_729:HG4_Ill_Spiral_74:HG2_Ill_breakscan11_116;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_729:HG2_10X_allpass_146:HG2_Ill_GATKHCSBGrefine_600:HG2_Ill_MetaSV_270:HG2_Ill_SVrefine2DISCOVARplusDovetail_755:HG2_Ill_manta_246:HG2_Ill_scalpel_848:HG2_PB_SVrefine2Falcon1plusDovetail_642:HG2_PB_SVrefine2Falcon2Bionano_198:HG2_PB_SVrefine2PB10Xhap12_766:HG2_PB_SVrefine2PBcRplusDovetail_644:HG3_PB_SVrefine2Falcon1Dovetail_555:HG4_10X_allpass_153:HG4_Ill_GATKHCSBGrefine_627:HG4_Ill_SVrefine2DISCOVARDovetail_684:HG4_Ill_manta_216:HG4_Ill_scalpel_811:HG4_PB_SVrefine2Falcon1Dovetail_597;NumExactMatchSVs=18;ClusterMaxShiftDist=0.102484;ClusterMaxSizeDiff=0.102484;ClusterMaxEditDist=0.102484;PBcalls=11;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=76621;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=1:169160021-169160366;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:0|1:37:0:1:26:1|0:0:30:35:0:0/1:25:25:0/1:18:6:22333:.:.
chr1	169471914	HG2_PB_SVrefine2Falcon2Bionano_201	CTGCTATGGGATCTTGGGCTCTCCAGGCCTCAGTTTCTTCATCTGGCTGACTGTCGTGGATCGGAGGAGATGATCTCCAAGGGCCTTTTCAGCTTGGAGTGT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_757:HG2_PB_HySA_1774:HG2_PB_pbsv_938:HG3_PB_pbsv_948:HG3_PB_HySA_1407:HG3_PB_SVrefine2Falcon1Dovetail_557:HG3_Ill_svaba_1143:HG3_Ill_SVrefine2DISCOVARDovetail_609:HG2_PB_SVrefine2PBcRplusDovetail_647:HG2_PB_SVrefine2PB10Xhap12_769:HG2_PB_SVrefine2Falcon2Bionano_201:HG2_PB_SVrefine2Falcon1plusDovetail_645:HG2_Ill_svaba_1108:HG2_Ill_SpiralSDKrefine_881;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_757:HG3_PB_SVrefine2Falcon1Dovetail_557:HG3_Ill_svaba_1143:HG3_Ill_SVrefine2DISCOVARDovetail_609:HG2_PB_SVrefine2PBcRplusDovetail_647:HG2_PB_SVrefine2PB10Xhap12_769:HG2_PB_SVrefine2Falcon2Bionano_201:HG2_PB_SVrefine2Falcon1plusDovetail_645:HG2_Ill_svaba_1108:HG2_Ill_SpiralSDKrefine_881;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0196078;ClusterMaxSizeDiff=0.0196078;ClusterMaxEditDist=0.0196078;PBcalls=9;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-101;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=104;REFWIDENED=1:169471915-169472119;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:27:./.:8:18:10:7:0|1:28:1:0:5:0/1:19:27:./.:.:.:.:.:.
chr1	169637782	HG4_Ill_GATKHCSBGrefine_630	GTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAGGGTTTGTGAGTGCACCAGTCGACACTCTGTATCTAGCTGCTTTGGTGGGGCCTTGGAGAACCATTATGTCTAGCTAAGGGATTGTAAATACACCAGTCGGCACTCTA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_771:HG2_PB_assemblyticsfalcon_1367:HG2_PB_assemblyticsPBcR_1341:HG2_PB_pbsv_940:HG4_PB_pbsv_949:HG4_Ill_SVrefine2DISCOVARDovetail_687:HG4_Ill_GATKHCSBGrefine_630:HG4_10X_allpass_154:HG2_PB_SVrefine2PBcRplusDovetail_649:HG2_PB_SVrefine2Falcon1plusDovetail_647:HG2_Ill_SVrefine2DISCOVARplusDovetail_759:HG2_Ill_GATKHCSBGrefine_605;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_605:HG2_Ill_SVrefine2DISCOVARplusDovetail_759:HG2_PB_SVrefine2Falcon1plusDovetail_647:HG2_PB_SVrefine2PBcRplusDovetail_649:HG4_10X_allpass_154:HG4_Ill_GATKHCSBGrefine_630:HG4_Ill_SVrefine2DISCOVARDovetail_687;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00625;ClusterMaxSizeDiff=0.00623053;ClusterMaxEditDist=0.0993789;PBcalls=7;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-160;DistBack=47105;DistForward=7881;DistMin=7881;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=188;REFWIDENED=1:169637718-169638065;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:0|1:29:1:1:24:1|0:0:6:21:1:0/1:23:13:./.:.:.:.:.:.
chr1	169730418	HG2_PB_pbsv_941	TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_760:HG3_PB_assemblyticsfalcon_1328:HG2_PB_HySA_1776:HG2_PB_SVrefine2PBcRplusDovetail_650:HG4_PB_pbsv_950:HG2_PB_pbsv_941:HG2_PB_SVrefine2PB10Xhap12_772:HG2_10X_SVrefine210Xhap12_736:HG2_Ill_tnscope_100:HG4_PB_SVrefine2Falcon1Dovetail_599:HG2_PB_SVrefine2Falcon1plusDovetail_648:HG4_Ill_SVrefine2DISCOVARDovetail_688;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_736:HG2_PB_SVrefine2PB10Xhap12_772:HG2_PB_pbsv_941:HG4_PB_pbsv_950;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0499168;ClusterMaxSizeDiff=0.0497512;ClusterMaxEditDist=0.199667;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-306;DistBack=84593;DistForward=-22;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=286;REFWIDENED=1:169730419-169731010;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:34:0|1:26:0:0:32:./.:1:11:28:1:0/1:10:5:0/1:18:2:.:.:.
chr1	169820123	HG2_PB_SVrefine2PBcRplusDovetail_651	TTTTTTTTTTTTTTTTTTTTTTTTTATTTGGGCAGCCTCCCAAGCCAGGGTAAGCTCAGGGCCC	T	20	PASS	ClusterIDs=HG2_PB_HySA_1780:HG4_PB_pbsv_952:HG3_Ill_GATKHC_1515:HG2_Ill_GATKHC_1450:HG2_PB_SVrefine2PB10Xhap12_773:HG4_PB_HySA_1375:HG2_PB_SVrefine2PBcRplusDovetail_651:HG2_PB_SVrefine2Falcon1plusDovetail_649:HG4_PB_assemblyticsfalcon_1319:HG3_PB_assemblyticsfalcon_1330:HG2_Ill_SVrefine2DISCOVARplusDovetail_761:HG2_Ill_GATKHC_1449:HG2_PB_pbsv_943;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_649:HG2_PB_SVrefine2PBcRplusDovetail_651:HG4_PB_HySA_1375;NumExactMatchSVs=3;ClusterMaxShiftDist=0.20155;ClusterMaxSizeDiff=0.20155;ClusterMaxEditDist=0.201681;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-63;DistBack=12491;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=1:169820124-169820216;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.9265;PctRecOverlap=0.9275;SizeDiff=-5;StartDistance=2;EndDistance=-3;GTMatch=0;TruScore=93;MatchId=200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:43:./.:25:14:7:19:./.:4:5:8:2:./.:1:5:./.:.:.:.:.:.
chr1	171179856	HG4_Ill_250bpfermikitraw_1199	TGTACTTCTCCCTCAGGGACGTAGAACAATGGAATGTCAGTCAGTCTCTGTAGTTAAAACTTTTTCTTTAAAATTCAATTAAG	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_1212:HG3_PB_pbsv_955:HG4_PB_pbsv_960:HG3_Ill_GATKHCSBGrefine_602:HG2_Ill_GATKHCSBGrefine_608:HG2_PB_assemblyticsPBcR_1356:HG2_PB_PB10Xdip_727:HG2_PB_assemblyticsfalcon_1384:HG3_PB_assemblyticsfalcon_1342:HG2_PB_pbsv_950:HG4_PB_SVrefine2Falcon1Dovetail_603:HG4_Ill_SVrefine2DISCOVARDovetail_692:HG4_Ill_250bpfermikitraw_1199:HG4_Ill_150bpfermikitraw_1153:HG3_Ill_Krunchall_1264:HG3_Ill_250bpfermikitraw_1213:HG3_Ill_150bpfermikitraw_1152:HG2_Ill_Krunchall_1224;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1212:HG4_PB_SVrefine2Falcon1Dovetail_603:HG4_Ill_SVrefine2DISCOVARDovetail_692:HG4_Ill_250bpfermikitraw_1199:HG4_Ill_150bpfermikitraw_1153:HG3_Ill_Krunchall_1264:HG3_Ill_250bpfermikitraw_1213:HG3_Ill_150bpfermikitraw_1152:HG2_Ill_Krunchall_1224;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0613497;ClusterMaxSizeDiff=0.0613497;ClusterMaxEditDist=0.0880503;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-82;DistBack=35717;DistForward=-81;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=168;REFWIDENED=1:171179857-171180106;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:0:45:1:21:./.:1:2:0:2:1/1:0:20:./.:.:.:.:.:.
chr1	171190122	HG3_Ill_scalpel_932	CGAGAGAACTCAGGAGGGGAAAAGGAAACGGGATGACAGAGAGAGAGAGAGAAACAGAGTGCAAATGAGAGAGAGATAAATAGATGGAAAGAGTAAGTAAGAGAGAAACTGGAAGA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_956:HG2_PB_HySA_1793:HG3_Ill_Krunchall_1265:HG3_PB_assemblyticsfalcon_1344:HG3_PB_HySA_1422:HG3_PB_SVrefine2Falcon1Dovetail_564:HG3_Ill_svaba_1158:HG3_Ill_scalpel_932:HG3_Ill_manta_192:HG3_Ill_SVrefine2DISCOVARDovetail_620:HG3_Ill_MetaSV_253:HG3_Ill_GATKHC_1531:HG3_Ill_GATKHCSBGrefine_603:HG3_Ill_250bpfermikitraw_1214:HG3_Ill_150bpfermikitraw_1153:HG3_CG_vcfBeta_528:HG3_10X_allpass_175:HG2_PB_pbsv_951:HG2_PB_assemblyticsPBcR_1357:HG2_PB_SVrefine2PBcRplusDovetail_654:HG2_PB_SVrefine2PB10Xhap12_777:HG2_Ill_svaba_1124:HG2_Ill_manta_252:HG2_Ill_SpiralSDKrefine_893:HG2_Ill_SVrefine2DISCOVARplusDovetail_766:HG2_Ill_MetaSV_272:HG2_Ill_GATKHC_1468:HG2_Ill_GATKHCSBGrefine_609:HG2_CG_vcfBeta_546:HG2_10X_allpass_147:HG2_10X_SVrefine210Xhap12_740;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_740:HG2_10X_allpass_147:HG2_CG_vcfBeta_546:HG2_Ill_GATKHCSBGrefine_609:HG2_Ill_GATKHC_1468:HG2_Ill_MetaSV_272:HG2_Ill_SVrefine2DISCOVARplusDovetail_766:HG2_Ill_SpiralSDKrefine_893:HG2_Ill_manta_252:HG2_Ill_svaba_1124:HG2_PB_SVrefine2PB10Xhap12_777:HG2_PB_SVrefine2PBcRplusDovetail_654:HG2_PB_assemblyticsPBcR_1357:HG2_PB_pbsv_951:HG3_10X_allpass_175:HG3_CG_vcfBeta_528:HG3_Ill_150bpfermikitraw_1153:HG3_Ill_250bpfermikitraw_1214:HG3_Ill_GATKHCSBGrefine_603:HG3_Ill_GATKHC_1531:HG3_Ill_MetaSV_253:HG3_Ill_SVrefine2DISCOVARDovetail_620:HG3_Ill_manta_192:HG3_Ill_scalpel_932:HG3_Ill_svaba_1158:HG3_PB_SVrefine2Falcon1Dovetail_564;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0172414;ClusterMaxSizeDiff=0.0172414;ClusterMaxEditDist=0.0347826;PBcalls=9;Illcalls=17;TenXcalls=3;CGcalls=2;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=2;HG2count=15;HG3count=16;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-115;DistBack=986;DistForward=104718;DistMin=986;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:171190116-171190248;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=202.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:48:1|0:1:56:20:0:0|1:50:0:0:25:0/1:28:15:./.:.:.:.:.:.
chr1	171783587	HG2_CG_vcfBeta_551	ACTCCAGCCTGGGCGACAGAGTGGGACTCCATCTAAAAAAAAAAAAAAAAAAAGGGGCTGATG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_961:HG3_PB_HySA_1429:HG2_PB_HySA_1800:HG2_PB_assemblyticsfalcon_1387:HG3_PB_assemblyticsfalcon_1350:HG4_PB_assemblyticsfalcon_1334:HG4_Ill_svaba_1118:HG4_Ill_scalpel_825:HG4_Ill_Krunchall_1278:HG4_Ill_GATKHC_1442:HG4_Ill_GATKHCSBGrefine_635:HG4_Ill_250bpfermikitraw_1206:HG4_Ill_150bpfermikitraw_1159:HG4_CG_vcfBeta_606:HG4_10X_allpass_156:HG3_PB_pbsv_958:HG3_Ill_svaba_1166:HG3_Ill_scalpel_941:HG3_Ill_manta_193:HG3_Ill_Krunchall_1275:HG3_Ill_GATKHC_1541:HG3_Ill_GATKHCSBGrefine_604:HG3_Ill_250bpfermikitraw_1223:HG3_Ill_150bpfermikitraw_1163:HG3_CG_vcfBeta_533:HG3_10X_allpass_176:HG2_PB_pbsv_952:HG2_PB_assemblyticsPBcR_1363:HG2_Ill_svaba_1129:HG2_Ill_scalpel_866:HG2_Ill_manta_253:HG2_Ill_SpiralSDKrefine_899:HG2_Ill_Krunchall_1232:HG2_Ill_GATKHC_1476:HG2_Ill_GATKHCSBGrefine_610:HG2_Ill_250bpfermikitraw_1218:HG2_Ill_150bpfermikitraw_1114:HG2_CG_vcfBeta_551;NumClusterSVs=38;ExactMatchIDs=HG2_CG_vcfBeta_551:HG2_Ill_150bpfermikitraw_1114:HG2_Ill_250bpfermikitraw_1218:HG2_Ill_GATKHCSBGrefine_610:HG2_Ill_GATKHC_1476:HG2_Ill_Krunchall_1232:HG2_Ill_SpiralSDKrefine_899:HG2_Ill_manta_253:HG2_Ill_scalpel_866:HG2_Ill_svaba_1129:HG2_PB_assemblyticsPBcR_1363:HG2_PB_pbsv_952:HG3_10X_allpass_176:HG3_CG_vcfBeta_533:HG3_Ill_150bpfermikitraw_1163:HG3_Ill_250bpfermikitraw_1223:HG3_Ill_GATKHCSBGrefine_604:HG3_Ill_GATKHC_1541:HG3_Ill_Krunchall_1275:HG3_Ill_manta_193:HG3_Ill_scalpel_941:HG3_Ill_svaba_1166:HG3_PB_pbsv_958:HG4_10X_allpass_156:HG4_CG_vcfBeta_606:HG4_Ill_150bpfermikitraw_1159:HG4_Ill_250bpfermikitraw_1206:HG4_Ill_GATKHCSBGrefine_635:HG4_Ill_GATKHC_1442:HG4_Ill_Krunchall_1278:HG4_Ill_scalpel_825:HG4_Ill_svaba_1118:HG4_PB_assemblyticsfalcon_1334;NumExactMatchSVs=33;ClusterMaxShiftDist=0.048;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.0483871;PBcalls=9;Illcalls=24;TenXcalls=2;CGcalls=3;PBexactcalls=4;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=3;HG2count=14;HG3count=13;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-62;DistBack=324;DistForward=2024;DistMin=324;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:171783586-171783650;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=203.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:1/1:3:29:0:19:1/1:0:32:0:25:1/1:0:55:./.:.:.:.:.:.
chr1	173944737	HG3_PB_SVrefine2Falcon1Dovetail_572	TAAAAATACAGTAAATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_781:HG2_10X_allpass_148:HG4_PB_assemblyticsfalcon_1347:HG2_PB_HySA_1826:HG3_PB_pbsv_966:HG3_Ill_Krunchall_1295:HG4_PB_pbsv_968:HG2_PB_pbsv_959:HG2_PB_PB10Xdip_737:HG4_Ill_MetaSV_291:HG3_Ill_MetaSV_254:HG2_Ill_tnscope_101:HG4_PB_SVrefine2Falcon1Dovetail_607:HG4_Ill_manta_226:HG4_Ill_GATKHCSBGrefine_639:HG4_10X_allpass_157:HG3_PB_SVrefine2Falcon1Dovetail_572:HG3_PB_HySA_1442:HG3_Ill_SVrefine2DISCOVARDovetail_632:HG3_Ill_GATKHCSBGrefine_608:HG3_10X_allpass_177:HG2_PB_SVrefine2Falcon1plusDovetail_659:HG2_PB_HySA_1825:HG2_Ill_manta_257:HG2_Ill_breakscan11_118:HG2_Ill_GATKHCSBGrefine_613:HG2_10X_SVrefine210Xhap12_748:HG2_PB_SVrefine2PB10Xhap12_782;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_748:HG2_Ill_GATKHCSBGrefine_613:HG2_Ill_breakscan11_118:HG2_Ill_manta_257:HG2_PB_HySA_1825:HG2_PB_SVrefine2Falcon1plusDovetail_659:HG3_10X_allpass_177:HG3_Ill_GATKHCSBGrefine_608:HG3_Ill_SVrefine2DISCOVARDovetail_632:HG3_PB_HySA_1442:HG3_PB_SVrefine2Falcon1Dovetail_572:HG4_10X_allpass_157:HG4_Ill_GATKHCSBGrefine_639:HG4_Ill_manta_226:HG4_PB_SVrefine2Falcon1Dovetail_607;NumExactMatchSVs=15;ClusterMaxShiftDist=0.207386;ClusterMaxSizeDiff=0.207386;ClusterMaxEditDist=0.210227;PBcalls=13;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=57962;DistForward=-331;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:173944738-173945085;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=204.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:0|1:25:8:3:17:1|0:0:25:36:0:0/1:19:19:0/1:20:3:.:.:.
chr1	176270018	HG2_Ill_GATKHCSBGrefine_616	CACACACATCATATATATATTTATATATAAAACAACAGATGTCATACATATACATATAT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_1151:HG2_PB_HySA_1855:HG2_PB_pbsv_970:HG3_PB_pbsv_975:HG4_PB_pbsv_982:HG4_Ill_svaba_1145:HG4_Ill_manta_228:HG4_Ill_Krunchall_1321:HG4_Ill_GATKHCSBGrefine_648:HG4_Ill_250bpfermikitraw_1246:HG4_Ill_150bpfermikitraw_1195:HG3_Ill_svaba_1191:HG3_Ill_Krunchall_1317:HG3_Ill_GATKHCSBGrefine_612:HG3_Ill_250bpfermikitraw_1262:HG3_Ill_150bpfermikitraw_1192:HG2_PB_assemblyticsfalcon_1412:HG2_PB_assemblyticsPBcR_1398:HG2_Ill_svaba_1153:HG2_Ill_scalpel_893:HG2_Ill_manta_261:HG2_Ill_SpiralSDKrefine_926:HG2_Ill_Krunchall_1269:HG2_Ill_GATKHCSBGrefine_616:HG2_Ill_250bpfermikitraw_1258;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1151:HG4_Ill_svaba_1145:HG4_Ill_manta_228:HG4_Ill_Krunchall_1321:HG4_Ill_GATKHCSBGrefine_648:HG4_Ill_250bpfermikitraw_1246:HG4_Ill_150bpfermikitraw_1195:HG3_Ill_svaba_1191:HG3_Ill_Krunchall_1317:HG3_Ill_GATKHCSBGrefine_612:HG3_Ill_250bpfermikitraw_1262:HG3_Ill_150bpfermikitraw_1192:HG2_PB_assemblyticsfalcon_1412:HG2_PB_assemblyticsPBcR_1398:HG2_Ill_svaba_1153:HG2_Ill_scalpel_893:HG2_Ill_manta_261:HG2_Ill_SpiralSDKrefine_926:HG2_Ill_Krunchall_1269:HG2_Ill_GATKHCSBGrefine_616:HG2_Ill_250bpfermikitraw_1258;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.0521739;PBcalls=6;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=44796;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=82;REFWIDENED=1:176270019-176270158;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:./.:9:19:1:24:1/1:0:7:0:21:1/1:0:50:./.:.:.:.:.:.
chr1	176478217	HG2_PB_SVrefine2Falcon2Bionano_216	TAAGTAGAGAATATGTGATGCACTATTTAATCAGAGGTCAGATGAGAAGTGGCTCACTATCATGAGAACAGCAAGGGAGAAATCCACCCCCATGATTCAATCATTTCCCACGAGGTCACTCCCCCAACATGTGAGGATGACAATTTGATATGAGACTTGGGTGGGAACACAGAGCCACACCATATCATCTAACATATATATATGTCAGACTGCTTGAAATTTTTCCAAAAGCCATTGTATTAGTCCGTTTTCACACTGCTATAAAGAACTACCTGAGACTGAGTAATTTATTTTTTAAAAAAAAGGTCTAATTGATTCACAGCTCCACATGGCTGAGGAAGCCTCAGGACACTTATGATCATGGCAGAAGATGATGGCGAAGCAAGGCACATATTCCATGGCAGCAGGAGGGAGAGGGTGAAGGGGGACAGTGTTACACTTTTAAACAAAATGATCTCATAAGAACTCACTCACTATCATGAGAACAGCAAGGGAGAAATCCACCCCCATGATTCAATCATTTCCCACGAGGTCGCTCCCCCAACATGTGAGGATGA	T	20	PASS	ClusterIDs=HG2_PB_HySA_1858:HG4_PB_assemblyticsfalcon_1363:HG3_PB_assemblyticsfalcon_1381:HG2_PB_assemblyticsfalcon_1415:HG2_PB_assemblyticsPBcR_1401:HG4_10X_allpass_159:HG4_Ill_Krunchall_1323:HG3_Ill_Krunchall_1320:HG2_Ill_Krunchall_1272:HG2_10X_allpass_150:HG4_PB_pbsv_985:HG2_Ill_tnscope_102:HG4_PB_SVrefine2Falcon1Dovetail_616:HG4_Ill_manta_229:HG4_Ill_SVrefine2DISCOVARDovetail_709:HG4_Ill_MetaSV_292:HG4_Ill_GATKHCSBGrefine_650:HG3_PB_pbsv_978:HG3_PB_SVrefine2PBcRDovetail_546:HG3_PB_SVrefine2Falcon1Dovetail_581:HG3_Ill_manta_198:HG3_Ill_SVrefine2DISCOVARDovetail_646:HG3_Ill_MetaSV_259:HG3_Ill_GATKHCSBGrefine_613:HG3_10X_allpass_179:HG2_PB_pbsv_973:HG2_PB_SVrefine2PBcRplusDovetail_665:HG2_PB_SVrefine2PB10Xhap12_789:HG2_PB_SVrefine2Falcon2Bionano_216:HG2_PB_SVrefine2Falcon1plusDovetail_665:HG2_Ill_manta_262:HG2_Ill_SVrefine2DISCOVARplusDovetail_783:HG2_Ill_MetaSV_275:HG2_Ill_GATKHCSBGrefine_619:HG2_10X_SVrefine210Xhap12_758;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_758:HG2_Ill_GATKHCSBGrefine_619:HG2_Ill_MetaSV_275:HG2_Ill_SVrefine2DISCOVARplusDovetail_783:HG2_Ill_manta_262:HG2_PB_SVrefine2Falcon1plusDovetail_665:HG2_PB_SVrefine2Falcon2Bionano_216:HG2_PB_SVrefine2PB10Xhap12_789:HG2_PB_SVrefine2PBcRplusDovetail_665:HG2_PB_pbsv_973:HG3_10X_allpass_179:HG3_Ill_GATKHCSBGrefine_613:HG3_Ill_MetaSV_259:HG3_Ill_SVrefine2DISCOVARDovetail_646:HG3_Ill_manta_198:HG3_PB_SVrefine2Falcon1Dovetail_581:HG3_PB_SVrefine2PBcRDovetail_546:HG3_PB_pbsv_978:HG4_Ill_GATKHCSBGrefine_650:HG4_Ill_MetaSV_292:HG4_Ill_SVrefine2DISCOVARDovetail_709:HG4_Ill_manta_229:HG4_PB_SVrefine2Falcon1Dovetail_616;NumExactMatchSVs=23;ClusterMaxShiftDist=0.126043;ClusterMaxSizeDiff=0.126043;ClusterMaxEditDist=0.126043;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-556;DistBack=89234;DistForward=72254;DistMin=72254;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=34;REFWIDENED=1:176478218-176478807;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:82:1/1:0:43:0:15:1/1:0:48:0:38:1/1:0:37:./.:3:25:.:.:.
chr1	178474708	HG3_PB_SVrefine2Falcon1Dovetail_582	TGGATTCAGAGAAGCTAGGATTCAGAGGAGCTAGGATTCAGAGGAGCTAGGATTCAGAGGAGCTA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_787:HG4_PB_assemblyticsfalcon_1369:HG3_PB_pbsv_980:HG2_PB_pbsv_975:HG4_PB_pbsv_986:HG3_PB_HySA_1464:HG3_Ill_150bpfermikitraw_1200:HG4_PB_SVrefine2PBcRDovetail_525:HG4_Ill_SVrefine2DISCOVARDovetail_713:HG3_PB_SVrefine2PBcRDovetail_547:HG3_PB_SVrefine2Falcon1Dovetail_582:HG3_Ill_SVrefine2DISCOVARDovetail_652:HG2_PB_SVrefine2PBcRplusDovetail_667:HG2_PB_SVrefine2PB10Xhap12_791:HG2_PB_SVrefine2Falcon1plusDovetail_667;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_787:HG4_PB_SVrefine2PBcRDovetail_525:HG4_Ill_SVrefine2DISCOVARDovetail_713:HG3_PB_SVrefine2PBcRDovetail_547:HG3_PB_SVrefine2Falcon1Dovetail_582:HG3_Ill_SVrefine2DISCOVARDovetail_652:HG2_PB_SVrefine2PBcRplusDovetail_667:HG2_PB_SVrefine2PB10Xhap12_791:HG2_PB_SVrefine2Falcon1plusDovetail_667;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0615385;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.09375;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-64;DistBack=40741;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=383;REFWIDENED=1:178474709-178475155;PctSeqSimilarity=0.9737;PctSizeSimilarity=1;PctRecOverlap=0.6154;SizeDiff=0;StartDistance=-25;EndDistance=-25;GTMatch=0;TruScore=86;MatchId=207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:53:1/1:1:18:0:31:0/0:16:0:13:0:0/0:33:0:./.:.:.:.:.:.
chr1	179607289	HG3_Ill_SVrefine2DISCOVARDovetail_658	AAGATGTTTTCTCTTATTCTGGGGAAGCACTGATGGTTTTAAGAAAGCCATTGGAGTGAAGGGATGAAGATCTATTAGTGGACTAGTCTTGATGAGAGTGAGACTAGAAAGGAAGAGATAAATTGGGAAAATGAAAATTGCCAGGTGACAAGAAGGGTGTTGAGAAGAATAAGAAAGAGAAGGAGATGATGAAAACTGTTTGCTTTAGAGACTGGGCAGGTTTGAGCTGGGGTGAAAACTTATTAGTAGAAGTTCACCTGTAGTGTCTCTAAGTTGACCATGAGAGTCACTGGCAATGTTGACTAGATGGTATGAGTTAGGATTAGGTTTAGCCACTGTTAGATATAACTTTATCATAGTAGCTTAAAGAAGATAAAAGTTTATTTCTTCTTCCCAGAATAGTCCAAATATACACAATACATTCTGATATGATAGTTCCGTGGTGGGAGGGGGACACAGTTATAGAATCTTGCTGCTCCAGAATAGTGTGTTGTCCCTGTTCACGTGGTCTTGGGTGTGGCTGACCACTACCACCACCCAGTCATCCTGCCAGCTACTGGGAAGGGGAAAAAGAAGTGGGGGATGGGAGATATACCTGTTCTATTGAAAGACACAACCCAGAATTTTCACTCTTAAAACTGTGGGTAAAATACACATTAAATATATTCATTTTAACTATGTACACTTTTTCTTGTATCCCACTGGCCAAAATTTAGTATTCACATAGCCACACCTAGATGCAGGAGAGCTTGGGAAACCTGAATGACCATT	TAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_984:HG3_Ill_GATKHCSBGrefine_616:HG2_Ill_GATKHCSBGrefine_624:HG4_PB_SVrefine2Falcon1Dovetail_620:HG3_PB_SVrefine2PBcRDovetail_548:HG3_PB_SVrefine2Falcon1Dovetail_585:HG3_Ill_SVrefine2DISCOVARDovetail_658:HG2_PB_assemblyticsfalcon_1434:HG2_PB_SVrefine2PBcRplusDovetail_671:HG2_PB_SVrefine2PB10Xhap12_796:HG2_PB_SVrefine2Falcon1plusDovetail_671:HG2_10X_SVrefine210Xhap12_770:HG4_PB_assemblyticsfalcon_1381:HG3_PB_assemblyticsfalcon_1398:HG2_PB_assemblyticsPBcR_1419:HG3_10X_allpass_180:HG2_Ill_tnscope_103:HG2_Ill_SpiralSDKrefine_939:HG4_Ill_Cortex_203:HG3_Ill_Cortex_221:HG2_Ill_Cortex_427:HG3_Ill_manta_201:HG3_Ill_Spiral_1020:HG2_Ill_Spiral_53:HG2_10X_allpass_151:HG2_PB_pbsv_980:HG3_Ill_Krunchall_1331:HG2_Ill_Krunchall_1287;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_770:HG2_PB_SVrefine2Falcon1plusDovetail_671:HG2_PB_SVrefine2PB10Xhap12_796:HG2_PB_SVrefine2PBcRplusDovetail_671:HG2_PB_assemblyticsfalcon_1434:HG3_Ill_SVrefine2DISCOVARDovetail_658:HG3_PB_SVrefine2Falcon1Dovetail_585:HG3_PB_SVrefine2PBcRDovetail_548;NumExactMatchSVs=8;ClusterMaxShiftDist=0.208955;ClusterMaxSizeDiff=0.208955;ClusterMaxEditDist=0.208955;PBcalls=12;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-767;DistBack=-107;DistForward=-770;DistMin=-770;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:179607289-179608059;PctSeqSimilarity=0.9994;PctSizeSimilarity=0.9974;PctRecOverlap=0.9987;SizeDiff=-2;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=208.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:0|1:32:1:0:38:0|1:67:0:0:18:0/1:60:19:0/1:63:30:.:.:.
chr1	180183535	HG2_PB_SVrefine2PB10Xhap12_799	CTTTTTTTTTTTGAGGCAGAGTCTCACTCTGTCGCCAGGCTGGGGTGCAGTGCACTGCGTGATCTCAGCTTACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCATGCCACCACACCCAGCTAATTTTTGTATTTTCAGTTGAGACAGGGTTTCACCATGTTGGCCACGATGGTCTCTATCTCTTGACCTCATGATCTGCCTGCCTCGACCTCCCCAAGTGCTGGGATTACAGGAGTGAGCCACCGCGCCTGGCCAATATTGTGTAATCTTTTTTTTTTTTTTTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_772:HG2_PB_HySA_1882:HG2_PB_pbsv_982:HG3_PB_pbsv_986:HG3_PB_HySA_1474:HG4_PB_pbsv_993:HG4_PB_HySA_1464:HG3_Ill_MetaSV_264:HG4_Ill_scalpel_871:HG4_Ill_GATKHCSBGrefine_654:HG4_10X_allpass_160:HG3_Ill_manta_202:HG3_Ill_GATKHCSBGrefine_619:HG2_Ill_manta_270:HG2_Ill_SpiralSDKrefine_941:HG2_Ill_GATKHCSBGrefine_626:HG2_Ill_tnscope_104:HG4_PB_SVrefine2Falcon1Dovetail_622:HG4_PB_SVrefine2PBcRDovetail_529:HG4_Ill_SVrefine2DISCOVARDovetail_720:HG3_PB_SVrefine2PBcRDovetail_550:HG3_PB_SVrefine2Falcon1Dovetail_587:HG3_Ill_SVrefine2DISCOVARDovetail_660:HG2_PB_SVrefine2PB10Xhap12_799:HG2_PB_SVrefine2Falcon2Bionano_220:HG2_PB_SVrefine2Falcon1plusDovetail_673:HG2_Ill_SVrefine2DISCOVARplusDovetail_795;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_772:HG4_PB_SVrefine2PBcRDovetail_529:HG4_Ill_SVrefine2DISCOVARDovetail_720:HG3_PB_SVrefine2PBcRDovetail_550:HG3_PB_SVrefine2Falcon1Dovetail_587:HG3_Ill_SVrefine2DISCOVARDovetail_660:HG2_PB_SVrefine2PB10Xhap12_799:HG2_PB_SVrefine2Falcon2Bionano_220:HG2_PB_SVrefine2Falcon1plusDovetail_673:HG2_Ill_SVrefine2DISCOVARplusDovetail_795;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0186335;ClusterMaxSizeDiff=0.0186335;ClusterMaxEditDist=0.143079;PBcalls=13;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=53241;DistForward=-100;DistMin=-100;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=306;REFWIDENED=1:180183536-180184165;PctSeqSimilarity=0.9236;PctSizeSimilarity=0.9846;PctRecOverlap=0.0892;SizeDiff=5;StartDistance=-296;EndDistance=-291;GTMatch=0;TruScore=66;MatchId=209.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:1:30:0:22:0/0:31:2:21:1:0/1:44:5:./.:39:4:.:.:.
chr1	180292989	HG3_10X_allpass_181	TTACTCTATGTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_800:HG2_PB_assemblyticsfalcon_1438:HG2_10X_allpass_152:HG2_PB_assemblyticsPBcR_1422:HG4_PB_assemblyticsfalcon_1386:HG3_PB_assemblyticsfalcon_1402:HG3_PB_HySA_1475:HG4_PB_pbsv_994:HG2_PB_pbsv_983:HG2_Ill_breakscan11_119:HG2_PB_HySA_1883:HG4_PB_SVrefine2PBcRDovetail_530:HG4_PB_SVrefine2Falcon1Dovetail_623:HG4_Ill_scalpel_872:HG4_Ill_manta_230:HG4_Ill_SVrefine2DISCOVARDovetail_721:HG4_Ill_GATKHCSBGrefine_655:HG4_10X_allpass_161:HG3_PB_pbsv_987:HG3_PB_SVrefine2PBcRDovetail_551:HG3_PB_SVrefine2Falcon1Dovetail_588:HG3_Ill_scalpel_984:HG3_Ill_manta_203:HG3_Ill_SVrefine2DISCOVARDovetail_662:HG3_Ill_GATKHCSBGrefine_620:HG3_10X_allpass_181:HG2_PB_SVrefine2Falcon1plusDovetail_674:HG2_Ill_scalpel_910:HG2_Ill_manta_271:HG2_Ill_SpiralSDKrefine_942:HG2_Ill_SVrefine2DISCOVARplusDovetail_796:HG2_Ill_MetaSV_279:HG2_Ill_GATKHCSBGrefine_627:HG2_10X_SVrefine210Xhap12_773:HG4_Ill_MetaSV_296:HG3_Ill_MetaSV_265:HG2_Ill_tnscope_105;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_773:HG2_Ill_GATKHCSBGrefine_627:HG2_Ill_MetaSV_279:HG2_Ill_SVrefine2DISCOVARplusDovetail_796:HG2_Ill_SpiralSDKrefine_942:HG2_Ill_manta_271:HG2_Ill_scalpel_910:HG2_PB_SVrefine2Falcon1plusDovetail_674:HG3_10X_allpass_181:HG3_Ill_GATKHCSBGrefine_620:HG3_Ill_SVrefine2DISCOVARDovetail_662:HG3_Ill_manta_203:HG3_Ill_scalpel_984:HG3_PB_SVrefine2Falcon1Dovetail_588:HG3_PB_SVrefine2PBcRDovetail_551:HG3_PB_pbsv_987:HG4_10X_allpass_161:HG4_Ill_GATKHCSBGrefine_655:HG4_Ill_SVrefine2DISCOVARDovetail_721:HG4_Ill_manta_230:HG4_Ill_scalpel_872:HG4_PB_SVrefine2Falcon1Dovetail_623:HG4_PB_SVrefine2PBcRDovetail_530;NumExactMatchSVs=23;ClusterMaxShiftDist=0.202643;ClusterMaxSizeDiff=0.202643;ClusterMaxEditDist=0.216867;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=34815;DistForward=-288;DistMin=-288;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:180292990-180293328;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:23:0|1:33:0:1:27:1|0:0:23:62:0:0/1:30:21:0/1:29:9:.:.:.
chr1	182478447	HG2_PB_SVrefine2PB10Xhap12_811	GGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCAGA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_1005:HG3_PB_SVrefine2PBcRDovetail_560:HG4_PB_assemblyticsfalcon_1404:HG2_PB_assemblyticsfalcon_1455:HG2_PB_assemblyticsPBcR_1438:HG3_PB_SVrefine2Falcon1Dovetail_595:HG3_PB_assemblyticsfalcon_1421:HG3_PB_pbsv_998:HG4_Ill_GATKHCSBGrefine_664:HG2_PB_pbsv_993:HG4_PB_SVrefine2PBcRDovetail_540:HG4_PB_SVrefine2Falcon1Dovetail_632:HG2_PB_SVrefine2PB10Xhap12_811:HG2_PB_SVrefine2Falcon2Bionano_229:HG2_PB_SVrefine2Falcon1plusDovetail_684;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_684:HG2_PB_SVrefine2Falcon2Bionano_229:HG2_PB_SVrefine2PB10Xhap12_811:HG4_PB_SVrefine2Falcon1Dovetail_632:HG4_PB_SVrefine2PBcRDovetail_540;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0314961;ClusterMaxSizeDiff=0.0314961;ClusterMaxEditDist=0.0708661;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-126;DistBack=-19;DistForward=72024;DistMin=-19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=153;REFWIDENED=1:182478341-182478619;PctSeqSimilarity=0.9921;PctSizeSimilarity=0.9841;PctRecOverlap=0.9843;SizeDiff=2;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=98;MatchId=211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:47:1/1:2:22:0:21:./.:0:0:0:1:0/1:5:12:./.:.:.:.:.:.
chr1	182710730	HG4_PB_pbsv_1006	TCCCAGACGGGGCGGCTGGCTGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCAC	T	10	PASS	ClusterIDs=HG4_PB_pbsv_1006:HG2_PB_SVrefine2Falcon2Bionano_230:HG2_PB_SVrefine2PB10Xhap12_813:HG2_PB_pbsv_995;NumClusterSVs=4;ExactMatchIDs=HG4_PB_pbsv_1006;NumExactMatchSVs=1;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.164063;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-125;DistBack=-267;DistForward=9038;DistMin=-267;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=595;REFWIDENED=1:182710408-182711127;PctSeqSimilarity=0.9658;PctSizeSimilarity=0.9843;PctRecOverlap=0.4297;SizeDiff=-2;StartDistance=-71;EndDistance=-73;GTMatch=0;TruScore=79;MatchId=212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:39:./.:32:13:13:21:./.:1:0:7:0:0/0:38:0:./.:.:.:.:.:.
chr1	184768856	HG4_Ill_GATKHCSBGrefine_668	AATGATTGCCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTAGGCTCACTGCAAGCTCCGCCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG4_10X_allpass_162:HG2_PB_assemblyticsPBcR_1455:HG2_PB_assemblyticsfalcon_1470:HG4_PB_pbsv_1011:HG2_PB_SVrefine2PB10Xhap12_818:HG3_PB_SVrefine2Falcon1Dovetail_602:HG4_PB_SVrefine2PBcRDovetail_544:HG4_PB_SVrefine2Falcon1Dovetail_635:HG4_Ill_GATKHCSBGrefine_668:HG3_PB_pbsv_1006:HG2_PB_pbsv_999:HG2_PB_SVrefine2PB10Xhap12_817:HG2_PB_SVrefine2Falcon1plusDovetail_687:HG2_10X_SVrefine210Xhap12_789;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_789:HG2_PB_SVrefine2Falcon1plusDovetail_687:HG2_PB_SVrefine2PB10Xhap12_817:HG2_PB_pbsv_999:HG3_PB_pbsv_1006:HG4_Ill_GATKHCSBGrefine_668:HG4_PB_SVrefine2Falcon1Dovetail_635:HG4_PB_SVrefine2PBcRDovetail_544;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0913386;ClusterMaxSizeDiff=0.0913386;ClusterMaxEditDist=0.0913386;PBcalls=11;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=48596;DistForward=-284;DistMin=-284;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:184768857-184769192;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:12:35:0|1:14:0:0:35:./.:39:0:0:2:0/1:26:4:0/1:23:6:.:.:.
chr1	184814728	HG3_PB_SVrefine2PBcRDovetail_565	CAAAAATTTTAAAAAGGGAATGTGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGATCCCAGCGTAAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCAGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCACCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGCGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCTGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAGGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTAGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACATTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAATGCCACAAAGACACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCAGGTTACCCTCAAAGGAAAGCCCATCAGACTTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGGTCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGTGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAAAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGTAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGAAAGGCTGGTTCAATATACACAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTAATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATATTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATGTCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCACAACCTAGTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACAATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAATTAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_790:HG4_Ill_Krunchall_1370:HG3_Ill_Krunchall_1360:HG2_Ill_Krunchall_1317:HG4_10X_allpass_163:HG3_10X_allpass_182:HG2_10X_allpass_153:HG3_PB_assemblyticsfalcon_1437:HG2_PB_assemblyticsPBcR_1456:HG2_PB_assemblyticsfalcon_1471:HG2_Ill_tnscope_106:HG4_PB_pbsv_1012:HG4_PB_SVrefine2PBcRDovetail_545:HG4_Ill_MetaSV_303:HG4_Ill_GATKHCSBGrefine_669:HG3_PB_pbsv_1007:HG3_PB_SVrefine2PBcRDovetail_565:HG3_PB_SVrefine2Falcon1Dovetail_603:HG3_Ill_SVrefine2DISCOVARDovetail_677:HG3_Ill_MetaSV_270:HG3_Ill_GATKHCSBGrefine_630:HG2_PB_pbsv_1000:HG2_PB_SVrefine2PB10Xhap12_819:HG2_PB_SVrefine2Falcon2Bionano_234:HG2_PB_SVrefine2Falcon1plusDovetail_688:HG2_Ill_SVrefine2DISCOVARplusDovetail_816:HG2_Ill_MetaSV_285:HG2_Ill_GATKHCSBGrefine_638;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_790:HG4_PB_pbsv_1012:HG4_PB_SVrefine2PBcRDovetail_545:HG4_Ill_MetaSV_303:HG4_Ill_GATKHCSBGrefine_669:HG3_PB_pbsv_1007:HG3_PB_SVrefine2PBcRDovetail_565:HG3_PB_SVrefine2Falcon1Dovetail_603:HG3_Ill_SVrefine2DISCOVARDovetail_677:HG3_Ill_MetaSV_270:HG3_Ill_GATKHCSBGrefine_630:HG2_PB_pbsv_1000:HG2_PB_SVrefine2PB10Xhap12_819:HG2_PB_SVrefine2Falcon2Bionano_234:HG2_PB_SVrefine2Falcon1plusDovetail_688:HG2_Ill_SVrefine2DISCOVARplusDovetail_816:HG2_Ill_MetaSV_285:HG2_Ill_GATKHCSBGrefine_638;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00479497;ClusterMaxSizeDiff=0.00479497;ClusterMaxEditDist=0.00479497;PBcalls=12;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-6056;DistBack=45549;DistForward=-6042;DistMin=-6042;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:184814729-184820799;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=215.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:170:1/1:0:26:0:32:1/1:1:41:0:28:1/1:0:26:1/1:0:401:6022:.:.
chr1	184937037	HG3_PB_SVrefine2PBcRDovetail_566	TAGAAATCACAACTCACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGGGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_1047:HG2_10X_allpass_154:HG3_Ill_Krunchall_1361:HG2_Ill_Krunchall_1318:HG2_PB_pbsv_1001:HG3_PB_pbsv_1008:HG3_Ill_MetaSV_271:HG2_Ill_tnscope_107:HG4_PB_assemblyticsfalcon_1415:HG3_PB_SVrefine2PBcRDovetail_566:HG3_Ill_manta_206:HG3_Ill_SVrefine2DISCOVARDovetail_678:HG3_Ill_GATKHCSBGrefine_631:HG3_10X_allpass_183:HG2_PB_assemblyticsfalcon_1472:HG2_PB_SVrefine2Falcon1plusDovetail_689:HG2_Ill_manta_276:HG2_Ill_MetaSV_286:HG2_Ill_GATKHCSBGrefine_639:HG2_10X_SVrefine210Xhap12_792;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_792:HG2_Ill_GATKHCSBGrefine_639:HG2_Ill_MetaSV_286:HG2_Ill_manta_276:HG2_PB_SVrefine2Falcon1plusDovetail_689:HG2_PB_assemblyticsfalcon_1472:HG3_10X_allpass_183:HG3_Ill_GATKHCSBGrefine_631:HG3_Ill_SVrefine2DISCOVARDovetail_678:HG3_Ill_manta_206:HG3_PB_SVrefine2PBcRDovetail_566:HG4_PB_assemblyticsfalcon_1415;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0636943;ClusterMaxSizeDiff=0.0636943;ClusterMaxEditDist=0.0636943;PBcalls=6;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=12545;DistForward=-299;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:184937038-184937375;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:25:0|1:40:1:1:28:0|1:57:0:0:31:0/1:33:24:0/1:15:9:.:.:.
chr1	186764512	HG4_PB_HySA_1496	TATTGTTACTTTATCATCCACTGAACTTATATCTTTCTGCTTTTCTACCTCTGGGATGACACGTTTAATACCCCTCAGGCAATGGTTACTTAATAGTTGCTTCCCTGGTGTCACTCTATTTTTACTGATTCTCTCATCCCTAGGATGGCAGATATCTGTAGGTGCTGTATTTCTTTTCCTTCAAAATCTATCTCTCAAGAGTAGGAATCATTTTTTTATTTTCAACAATAGTGGAAATTTCATAGGTGCTTGTTGGGTGCCGTCATACTCTTTCCCAGACTTCCAAAGCATCCTGTTTTCCTGTCTGCATTAGAGTTCTTGGTTGTAAGCAACAGAAACAGACTCTGGTAAATTAAGTAAGGAGAAACTTACTGCAAAAACAGGCAACATCCCCAGAATCAATCAGTGATGGACATTTGGGTTTGGCAATGTATAGGAGCAAAGGAGATCCGTCAAACTGATGAACAGGAAACAAAGCCGCCATCTTGCAGTCGGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_798:HG3_PB_HySA_1524:HG2_PB_pbsv_1005:HG4_PB_pbsv_1017:HG2_PB_HySA_1923:HG3_PB_pbsv_1013:HG4_Ill_MetaSV_305:HG4_PB_SVrefine2PBcRDovetail_550:HG4_PB_SVrefine2Falcon1Dovetail_639:HG4_PB_HySA_1496:HG4_Ill_SVrefine2DISCOVARDovetail_740:HG3_PB_SVrefine2PBcRDovetail_569:HG3_PB_SVrefine2Falcon1Dovetail_606:HG3_Ill_SVrefine2DISCOVARDovetail_688:HG2_PB_SVrefine2PBcRplusDovetail_674:HG2_PB_SVrefine2PB10Xhap12_823:HG2_PB_SVrefine2Falcon2Bionano_236:HG2_PB_SVrefine2Falcon1plusDovetail_692:HG2_Ill_SVrefine2DISCOVARplusDovetail_821;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_798:HG4_PB_SVrefine2PBcRDovetail_550:HG4_PB_SVrefine2Falcon1Dovetail_639:HG4_PB_HySA_1496:HG4_Ill_SVrefine2DISCOVARDovetail_740:HG3_PB_SVrefine2PBcRDovetail_569:HG3_PB_SVrefine2Falcon1Dovetail_606:HG3_Ill_SVrefine2DISCOVARDovetail_688:HG2_PB_SVrefine2PBcRplusDovetail_674:HG2_PB_SVrefine2PB10Xhap12_823:HG2_PB_SVrefine2Falcon2Bionano_236:HG2_PB_SVrefine2Falcon1plusDovetail_692:HG2_Ill_SVrefine2DISCOVARplusDovetail_821;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0101112;ClusterMaxSizeDiff=0.0101112;ClusterMaxEditDist=0.0142132;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-495;DistBack=0;DistForward=-407;DistMin=-407;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=497;REFWIDENED=1:186764513-186765504;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=217.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:66:1/1:0:42:1:18:./.:0:0:0:0:./.:0:2:./.:2:6:.:.:.
chr1	188539454	HG2_Ill_MetaSV_289	TCATCAATTAAGTGAAATGACATCTCACAGAATAGAGAAAATATCTGGCAAATCATGTACTTGACAAAGGTCTGGTAGGCAGAAGATATAAAGAAATGTTATGATGTAAAAACGAGAACAACAAAATGAATAACCCAATTTAAAAAGTGGCCAAAAGATTTTAATGGACAATTTTACAAGGAAGATATACAAATGACCAATACACATGTAACAATCACTGACCATCATTAGTCATCTGGGAAATGCAAATTAAAACACATTGACACAACATTTTCCACCAGTAATCAGGCTATAGTTACAAAGAAAGACAGATAATTACAAATGATAGCAAAACTACTGAAAAATTAGAACCTTCATGCATTTCTAGTGGTATGTAAAATGATACAGTTGCTTTGGAAAACTTTTGTAGTAGCCCAGAAAGTTACAGATAGTCTGGTTTTGCATGTATGAAACCCATAAGTCATCAATCCCATGCTCACAACAGGAAAAACAACAACAAACAAACCTAAAAACTGAATATCAAATCAGATACCACAGATCATCAGATAATTGAAATCACAGAAAAATTACTCTCCCCTCAAAGTGGAGAGATAGGCAGATACAGAAAATCATATTTACAAAGGCAAAAGCCCAGGACAGAAAACACTGCTGGAGCTATACTCAGGGTAGAAAAACTTTCAAGTGCAAATGAAAAATTGCAGGAGGCCCAGTGCAGGTAAACTCGATTATTAAAAATCCCCCAAAGCCTAGTCTTGGGAGGAGGTAGGTAGGGCCCA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_1020:HG2_10X_allpass_155:HG4_PB_HySA_1522:HG3_PB_HySA_1552:HG2_PB_HySA_1950:HG4_PB_pbsv_1028:HG4_Ill_Krunchall_1403:HG3_Ill_Krunchall_1389:HG2_Ill_Krunchall_1349:HG4_PB_assemblyticsfalcon_1450:HG2_PB_assemblyticsfalcon_1502:HG2_PB_assemblyticsPBcR_1487:HG3_PB_assemblyticsfalcon_1467:HG4_Ill_Krunchall_1402:HG3_Ill_Krunchall_1388:HG2_Ill_tnscope_110:HG4_PB_SVrefine2PBcRDovetail_560:HG4_PB_SVrefine2Falcon1Dovetail_652:HG4_Ill_manta_238:HG4_Ill_SVrefine2DISCOVARDovetail_749:HG4_Ill_MetaSV_310:HG4_Ill_GATKHCSBGrefine_683:HG4_Ill_Cortex_211:HG4_10X_allpass_166:HG3_PB_SVrefine2PBcRDovetail_575:HG3_PB_SVrefine2Falcon1Dovetail_614:HG3_Ill_manta_210:HG3_Ill_SVrefine2DISCOVARDovetail_695:HG3_Ill_MetaSV_279:HG3_Ill_GATKHCSBGrefine_675:HG3_Ill_Cortex_230:HG3_10X_allpass_188:HG2_PB_pbsv_1012:HG2_PB_SVrefine2PBcRplusDovetail_678:HG2_PB_SVrefine2PB10Xhap12_828:HG2_PB_SVrefine2Falcon2Bionano_239:HG2_PB_SVrefine2Falcon1plusDovetail_699:HG2_Ill_manta_280:HG2_Ill_SpiralSDKrefine_981:HG2_Ill_SVrefine2DISCOVARplusDovetail_827:HG2_Ill_MetaSV_289:HG2_Ill_GATKHCSBGrefine_648:HG2_Ill_Cortex_454:HG2_10X_SVrefine210Xhap12_803:HG2_Ill_breakscan11_121;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_803:HG2_Ill_Cortex_454:HG2_Ill_GATKHCSBGrefine_648:HG2_Ill_MetaSV_289:HG2_Ill_SVrefine2DISCOVARplusDovetail_827:HG2_Ill_SpiralSDKrefine_981:HG2_Ill_manta_280:HG2_PB_SVrefine2Falcon1plusDovetail_699:HG2_PB_SVrefine2Falcon2Bionano_239:HG2_PB_SVrefine2PB10Xhap12_828:HG2_PB_SVrefine2PBcRplusDovetail_678:HG2_PB_pbsv_1012:HG3_10X_allpass_188:HG3_Ill_Cortex_230:HG3_Ill_GATKHCSBGrefine_675:HG3_Ill_MetaSV_279:HG3_Ill_SVrefine2DISCOVARDovetail_695:HG3_Ill_manta_210:HG3_PB_SVrefine2Falcon1Dovetail_614:HG3_PB_SVrefine2PBcRDovetail_575:HG4_10X_allpass_166:HG4_Ill_Cortex_211:HG4_Ill_GATKHCSBGrefine_683:HG4_Ill_MetaSV_310:HG4_Ill_SVrefine2DISCOVARDovetail_749:HG4_Ill_manta_238:HG4_PB_SVrefine2Falcon1Dovetail_652:HG4_PB_SVrefine2PBcRDovetail_560;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0129534;ClusterMaxSizeDiff=0.0129534;ClusterMaxEditDist=0.0129534;PBcalls=18;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-775;DistBack=26108;DistForward=-774;DistMin=-774;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:188539455-188540231;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:75:1/1:1:20:0:35:1/1:0:17:0:23:1/1:0:26:1/1:1:32:.:.:.
chr1	188994948	HG4_Ill_scalpel_921	TCAATTCTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_122:HG2_PB_assemblyticsfalcon_1507:HG3_PB_assemblyticsfalcon_1472:HG2_PB_assemblyticsPBcR_1493:HG4_Ill_Krunchall_1413:HG2_Ill_Krunchall_1354:HG4_Ill_Spiral_78:HG2_Ill_Spiral_54:HG4_PB_pbsv_1030:HG4_PB_HySA_1528:HG4_Ill_MetaSV_311:HG2_Ill_MetaSV_290:HG4_PB_assemblyticsfalcon_1455:HG4_PB_SVrefine2PBcRDovetail_561:HG4_PB_SVrefine2Falcon1Dovetail_653:HG4_Ill_scalpel_921:HG4_Ill_manta_239:HG4_Ill_SVrefine2DISCOVARDovetail_751:HG4_Ill_GATKHCSBGrefine_684:HG4_10X_allpass_169:HG3_PB_SVrefine2Falcon1Dovetail_616:HG2_PB_pbsv_1013:HG2_PB_SVrefine2PBcRplusDovetail_679:HG2_PB_SVrefine2PB10Xhap12_829:HG2_PB_SVrefine2Falcon1plusDovetail_700:HG2_Ill_scalpel_956:HG2_Ill_manta_281:HG2_Ill_SpiralSDKrefine_984:HG2_Ill_GATKHCSBGrefine_649:HG2_10X_allpass_156:HG2_10X_SVrefine210Xhap12_804:HG2_Ill_tnscope_111;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_804:HG2_10X_allpass_156:HG2_Ill_GATKHCSBGrefine_649:HG2_Ill_SpiralSDKrefine_984:HG2_Ill_manta_281:HG2_Ill_scalpel_956:HG2_PB_SVrefine2Falcon1plusDovetail_700:HG2_PB_SVrefine2PB10Xhap12_829:HG2_PB_SVrefine2PBcRplusDovetail_679:HG2_PB_pbsv_1013:HG3_PB_SVrefine2Falcon1Dovetail_616:HG4_10X_allpass_169:HG4_Ill_GATKHCSBGrefine_684:HG4_Ill_SVrefine2DISCOVARDovetail_751:HG4_Ill_manta_239:HG4_Ill_scalpel_921:HG4_PB_SVrefine2Falcon1Dovetail_653:HG4_PB_SVrefine2PBcRDovetail_561:HG4_PB_assemblyticsfalcon_1455;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0943683;ClusterMaxSizeDiff=0.0943683;ClusterMaxEditDist=0.0943683;PBcalls=13;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=2;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=1149;DistForward=5495;DistMin=1149;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:188994949-188995299;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=220.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:0|1:43:0:2:27:1|0:0:32:34:0:0/1:24:22:0/1:28:6:.:.:.
chr1	189032968	HG2_Ill_SpiralSDKrefine_986	TTGATTGATCATACTATTTTAAGGGCATGCCAAATAGCCTAACATATAATGGTTAGTAAATA	T	20	PASS	ClusterIDs=HG2_PB_HySA_1954:HG3_PB_assemblyticsfalcon_1474:HG2_PB_assemblyticsPBcR_1494:HG4_PB_pbsv_1031:HG2_PB_pbsv_1014:HG4_PB_HySA_1530:HG4_Ill_svaba_1224:HG4_Ill_manta_240:HG4_Ill_Krunchall_1416:HG4_Ill_GATKHCSBGrefine_685:HG4_Ill_250bpfermikitraw_1334:HG4_Ill_150bpfermikitraw_1282:HG2_Ill_svaba_1227:HG2_Ill_manta_282:HG2_Ill_SpiralSDKrefine_986:HG2_Ill_GATKHCSBGrefine_650:HG2_Ill_250bpfermikitraw_1346:HG2_Ill_150bpfermikitraw_1234;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1234:HG2_Ill_250bpfermikitraw_1346:HG2_Ill_GATKHCSBGrefine_650:HG2_Ill_SpiralSDKrefine_986:HG2_Ill_manta_282:HG2_Ill_svaba_1227:HG4_Ill_150bpfermikitraw_1282:HG4_Ill_250bpfermikitraw_1334:HG4_Ill_GATKHCSBGrefine_685:HG4_Ill_Krunchall_1416:HG4_Ill_manta_240:HG4_Ill_svaba_1224;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0322581;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.0483871;PBcalls=6;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-61;DistBack=4906;DistForward=8671;DistMin=4906;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=69;REFWIDENED=1:189032969-189033098;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:38:0|1:28:2:2:33:1|0:0:14:22:0:0/1:32:21:./.:.:.:.:.:.
chr1	189661645	HG4_PB_HySA_1541	TTAGCACCATCCCCTCAGTGCTGTTCTTGTGATGGAGGCCTCAGGGCATGTGCTTGTTTGAAAGTGTG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_806:HG2_PB_HySA_1961:HG4_PB_pbsv_1035:HG2_PB_assemblyticsfalcon_1511:HG2_PB_pbsv_1018:HG4_PB_HySA_1541:HG4_Ill_svaba_1232:HG4_Ill_SVrefine2DISCOVARDovetail_755:HG4_Ill_GATKHCSBGrefine_688:HG4_Ill_250bpfermikitraw_1344:HG2_PB_SVrefine2PB10Xhap12_830:HG2_Ill_svaba_1236:HG2_Ill_SpiralSDKrefine_995:HG2_Ill_SVrefine2DISCOVARplusDovetail_831:HG2_Ill_GATKHCSBGrefine_652:HG2_Ill_250bpfermikitraw_1356;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_806:HG4_PB_HySA_1541:HG4_Ill_svaba_1232:HG4_Ill_SVrefine2DISCOVARDovetail_755:HG4_Ill_GATKHCSBGrefine_688:HG4_Ill_250bpfermikitraw_1344:HG2_PB_SVrefine2PB10Xhap12_830:HG2_Ill_svaba_1236:HG2_Ill_SpiralSDKrefine_995:HG2_Ill_SVrefine2DISCOVARplusDovetail_831:HG2_Ill_GATKHCSBGrefine_652:HG2_Ill_250bpfermikitraw_1356;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0597015;ClusterMaxEditDist=0.0763359;PBcalls=6;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-67;DistBack=8517;DistForward=39;DistMin=39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=79;REFWIDENED=1:189661646-189661791;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:32:0|1:24:3:0:28:./.:1:4:21:2:0/1:19:21:./.:.:.:.:.:.
chr1	190597971	HG2_PB_SVrefine2PB10Xhap12_832	ATTCTGGTTATTAATCTCTTGTCATATGGGTAGTTTGGAAATACTCCCATTCTGTGGGTTGTCTC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_808:HG2_PB_HySA_1969:HG4_PB_pbsv_1036:HG3_PB_pbsv_1024:HG2_PB_pbsv_1020:HG4_PB_HySA_1545:HG4_PB_SVrefine2PBcRDovetail_563:HG4_PB_SVrefine2Falcon1Dovetail_654:HG4_Ill_svaba_1239:HG4_Ill_scalpel_938:HG4_Ill_manta_245:HG4_Ill_SVrefine2DISCOVARDovetail_757:HG4_Ill_Krunchall_1431:HG4_Ill_GATKHCSBGrefine_691:HG4_Ill_250bpfermikitraw_1355:HG4_Ill_150bpfermikitraw_1300:HG3_PB_SVrefine2PBcRDovetail_578:HG3_PB_SVrefine2Falcon1Dovetail_619:HG3_Ill_svaba_1269:HG3_Ill_scalpel_1047:HG3_Ill_manta_213:HG3_Ill_SVrefine2DISCOVARDovetail_700:HG3_Ill_Krunchall_1401:HG3_Ill_GATKHCSBGrefine_678:HG3_Ill_250bpfermikitraw_1345:HG3_Ill_150bpfermikitraw_1278:HG3_10X_allpass_191:HG2_PB_SVrefine2PBcRplusDovetail_680:HG2_PB_SVrefine2PB10Xhap12_832:HG2_PB_SVrefine2Falcon2Bionano_240:HG2_PB_SVrefine2Falcon1plusDovetail_703:HG2_Ill_svaba_1244:HG2_Ill_scalpel_973:HG2_Ill_manta_287:HG2_Ill_SpiralSDKrefine_1004:HG2_Ill_SVrefine2DISCOVARplusDovetail_835:HG2_Ill_GATKHCSBGrefine_655:HG2_Ill_250bpfermikitraw_1366:HG2_Ill_150bpfermikitraw_1255;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_808:HG4_PB_SVrefine2PBcRDovetail_563:HG4_PB_SVrefine2Falcon1Dovetail_654:HG4_Ill_svaba_1239:HG4_Ill_scalpel_938:HG4_Ill_manta_245:HG4_Ill_SVrefine2DISCOVARDovetail_757:HG4_Ill_Krunchall_1431:HG4_Ill_GATKHCSBGrefine_691:HG4_Ill_250bpfermikitraw_1355:HG4_Ill_150bpfermikitraw_1300:HG3_PB_SVrefine2PBcRDovetail_578:HG3_PB_SVrefine2Falcon1Dovetail_619:HG3_Ill_svaba_1269:HG3_Ill_scalpel_1047:HG3_Ill_manta_213:HG3_Ill_SVrefine2DISCOVARDovetail_700:HG3_Ill_Krunchall_1401:HG3_Ill_GATKHCSBGrefine_678:HG3_Ill_250bpfermikitraw_1345:HG3_Ill_150bpfermikitraw_1278:HG3_10X_allpass_191:HG2_PB_SVrefine2PBcRplusDovetail_680:HG2_PB_SVrefine2PB10Xhap12_832:HG2_PB_SVrefine2Falcon2Bionano_240:HG2_PB_SVrefine2Falcon1plusDovetail_703:HG2_Ill_svaba_1244:HG2_Ill_scalpel_973:HG2_Ill_manta_287:HG2_Ill_SpiralSDKrefine_1004:HG2_Ill_SVrefine2DISCOVARplusDovetail_835:HG2_Ill_GATKHCSBGrefine_655:HG2_Ill_250bpfermikitraw_1366:HG2_Ill_150bpfermikitraw_1255;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.03125;PBcalls=13;Illcalls=24;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-64;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=67;REFWIDENED=1:190597972-190598102;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:61:1/1:3:21:3:14:1/1:0:11:0:9:1/1:0:51:./.:.:.:.:.:.
chr1	190837319	HG3_Ill_MetaSV_281	CATTAGATCTCGAGAATTTATTCATCTCGTATAACTAAGACTTTGTGCCCTTTGATCAAATCTCTCCATTTCCTCCAGCCCCCTATATTGTGGTAACCCCTATTCTACTCTCTGCATGTTTAGATTTCACATATAAGTTAGATCATGCACTATTTGTGTCTGTGTCTGGCTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_809:HG2_PB_pbsv_1021:HG3_PB_pbsv_1025:HG3_PB_assemblyticsfalcon_1487:HG3_PB_HySA_1565:HG4_PB_pbsv_1037:HG2_PB_HySA_1970:HG4_Ill_SVrefine2DISCOVARDovetail_758:HG4_Ill_MetaSV_312:HG4_Ill_GATKHCSBGrefine_692:HG4_10X_allpass_170:HG3_PB_SVrefine2PBcRDovetail_579:HG3_PB_SVrefine2Falcon1Dovetail_620:HG3_Ill_scalpel_1049:HG3_Ill_manta_214:HG3_Ill_SVrefine2DISCOVARDovetail_702:HG3_Ill_MetaSV_281:HG3_Ill_GATKHCSBGrefine_679:HG3_Ill_250bpfermikitraw_1347:HG3_Ill_150bpfermikitraw_1280:HG3_CG_vcfBeta_593:HG3_10X_allpass_192:HG2_Ill_scalpel_974:HG2_Ill_manta_288:HG2_Ill_SpiralSDKrefine_1006:HG2_Ill_MetaSV_292:HG2_Ill_GATKHCSBGrefine_656;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_809:HG4_Ill_SVrefine2DISCOVARDovetail_758:HG4_Ill_MetaSV_312:HG4_Ill_GATKHCSBGrefine_692:HG4_10X_allpass_170:HG3_PB_SVrefine2PBcRDovetail_579:HG3_PB_SVrefine2Falcon1Dovetail_620:HG3_Ill_scalpel_1049:HG3_Ill_manta_214:HG3_Ill_SVrefine2DISCOVARDovetail_702:HG3_Ill_MetaSV_281:HG3_Ill_GATKHCSBGrefine_679:HG3_Ill_250bpfermikitraw_1347:HG3_Ill_150bpfermikitraw_1280:HG3_CG_vcfBeta_593:HG3_10X_allpass_192:HG2_Ill_scalpel_974:HG2_Ill_manta_288:HG2_Ill_SpiralSDKrefine_1006:HG2_Ill_MetaSV_292:HG2_Ill_GATKHCSBGrefine_656;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0291545;ClusterMaxSizeDiff=0.0291545;ClusterMaxEditDist=0.0293255;PBcalls=8;Illcalls=15;TenXcalls=3;CGcalls=1;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=1;HG2count=8;HG3count=14;HG4count=5;NumTechs=4;NumTechsExact=4;SVLEN=-171;DistBack=4131;DistForward=-168;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:190837320-190837493;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=224.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:31:0|1:24:2:2:35:0|1:56:0:0:29:0/1:29:5:./.:.:.:.:.:.
chr1	191545974	HG2_Ill_250bpfermikitraw_1370	AATATAATATAAATATTATATATATTATATAATATAAATGTATTATATTATGTAATATATAGT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_1041:HG2_PB_pbsv_1026:HG3_PB_assemblyticsfalcon_1493:HG4_PB_assemblyticsfalcon_1475:HG4_Ill_svaba_1245:HG4_Ill_scalpel_941:HG4_Ill_manta_248:HG4_Ill_Krunchall_1437:HG4_Ill_GATKHC_1614:HG4_Ill_GATKHCSBGrefine_697:HG4_Ill_Cortex_216:HG4_Ill_250bpfermikitraw_1359:HG4_Ill_150bpfermikitraw_1306:HG3_Ill_svaba_1275:HG3_Ill_scalpel_1056:HG3_Ill_manta_217:HG3_Ill_Krunchall_1406:HG3_Ill_GATKHC_1681:HG3_Ill_GATKHCSBGrefine_684:HG3_Ill_Cortex_234:HG3_Ill_250bpfermikitraw_1352:HG3_Ill_150bpfermikitraw_1285:HG2_PB_assemblyticsPBcR_1512:HG2_Ill_svaba_1248:HG2_Ill_scalpel_977:HG2_Ill_manta_292:HG2_Ill_SpiralSDKrefine_1009:HG2_Ill_Krunchall_1376:HG2_Ill_GATKHC_1645:HG2_Ill_GATKHCSBGrefine_661:HG2_Ill_Cortex_471:HG2_Ill_250bpfermikitraw_1370:HG2_Ill_150bpfermikitraw_1259:HG4_PB_HySA_1551:HG3_PB_pbsv_1030;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1259:HG2_Ill_250bpfermikitraw_1370:HG2_Ill_Cortex_471:HG2_Ill_GATKHCSBGrefine_661:HG2_Ill_GATKHC_1645:HG2_Ill_Krunchall_1376:HG2_Ill_SpiralSDKrefine_1009:HG2_Ill_manta_292:HG2_Ill_scalpel_977:HG2_Ill_svaba_1248:HG2_PB_assemblyticsPBcR_1512:HG3_Ill_150bpfermikitraw_1285:HG3_Ill_250bpfermikitraw_1352:HG3_Ill_Cortex_234:HG3_Ill_GATKHCSBGrefine_684:HG3_Ill_GATKHC_1681:HG3_Ill_Krunchall_1406:HG3_Ill_manta_217:HG3_Ill_scalpel_1056:HG3_Ill_svaba_1275:HG4_Ill_150bpfermikitraw_1306:HG4_Ill_250bpfermikitraw_1359:HG4_Ill_Cortex_216:HG4_Ill_GATKHCSBGrefine_697:HG4_Ill_GATKHC_1614:HG4_Ill_Krunchall_1437:HG4_Ill_manta_248:HG4_Ill_scalpel_941:HG4_Ill_svaba_1245:HG4_PB_assemblyticsfalcon_1475;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.0650406;PBcalls=7;Illcalls=28;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=28;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=83353;DistForward=4585;DistMin=4585;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:191545973-191546052;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:37:0|1:27:8:3:24:1|0:0:25:19:0:0/1:32:29:./.:.:.:.:.:.
chr1	192609798	HG3_CG_vcfBeta_601	GTCCTCCTCACTTATAGTAGAGACTTACATAGAAAATGAAGTTGATCAGACCACATTTCTCATATGT	G	20	PASS	ClusterIDs=HG3_PB_pbsv_1037:HG2_PB_HySA_1993:HG3_PB_HySA_1588:HG4_PB_pbsv_1047:HG4_Ill_svaba_1252:HG4_Ill_scalpel_949:HG4_Ill_manta_250:HG4_Ill_Krunchall_1447:HG4_Ill_GATKHC_1629:HG4_Ill_GATKHCSBGrefine_702:HG4_Ill_Cortex_220:HG4_Ill_250bpfermikitraw_1367:HG4_Ill_150bpfermikitraw_1314:HG4_CG_vcfBeta_692:HG4_10X_allpass_173:HG3_Ill_svaba_1286:HG3_Ill_manta_218:HG3_Ill_Krunchall_1420:HG3_Ill_GATKHC_1698:HG3_Ill_GATKHCSBGrefine_691:HG3_Ill_Cortex_238:HG3_Ill_250bpfermikitraw_1367:HG3_Ill_150bpfermikitraw_1298:HG3_CG_vcfBeta_601:HG3_10X_allpass_195:HG2_PB_pbsv_1032:HG2_PB_assemblyticsfalcon_1538:HG2_PB_assemblyticsPBcR_1523:HG2_Ill_svaba_1258:HG2_Ill_scalpel_984:HG2_Ill_manta_293:HG2_Ill_SpiralSDKrefine_1016:HG2_Ill_Krunchall_1388:HG2_Ill_GATKHC_1663:HG2_Ill_GATKHCSBGrefine_669:HG2_Ill_Cortex_477:HG2_Ill_250bpfermikitraw_1383:HG2_Ill_150bpfermikitraw_1273:HG2_CG_vcfBeta_622:HG2_10X_allpass_158:HG4_Ill_Krunchall_1446:HG2_Ill_breakscan11_123;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_158:HG2_CG_vcfBeta_622:HG2_Ill_150bpfermikitraw_1273:HG2_Ill_250bpfermikitraw_1383:HG2_Ill_Cortex_477:HG2_Ill_GATKHCSBGrefine_669:HG2_Ill_GATKHC_1663:HG2_Ill_Krunchall_1388:HG2_Ill_SpiralSDKrefine_1016:HG2_Ill_manta_293:HG2_Ill_scalpel_984:HG2_Ill_svaba_1258:HG2_PB_assemblyticsPBcR_1523:HG2_PB_assemblyticsfalcon_1538:HG2_PB_pbsv_1032:HG3_10X_allpass_195:HG3_CG_vcfBeta_601:HG3_Ill_150bpfermikitraw_1298:HG3_Ill_250bpfermikitraw_1367:HG3_Ill_Cortex_238:HG3_Ill_GATKHCSBGrefine_691:HG3_Ill_GATKHC_1698:HG3_Ill_Krunchall_1420:HG3_Ill_manta_218:HG3_Ill_svaba_1286:HG4_10X_allpass_173:HG4_CG_vcfBeta_692:HG4_Ill_150bpfermikitraw_1314:HG4_Ill_250bpfermikitraw_1367:HG4_Ill_Cortex_220:HG4_Ill_GATKHCSBGrefine_702:HG4_Ill_GATKHC_1629:HG4_Ill_Krunchall_1447:HG4_Ill_manta_250:HG4_Ill_scalpel_949:HG4_Ill_svaba_1252:HG4_PB_pbsv_1047;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.0298507;PBcalls=7;Illcalls=29;TenXcalls=3;CGcalls=3;PBexactcalls=4;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=3;HG2count=17;HG3count=12;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-66;DistBack=13121;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:192609799-192609866;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=226.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:7:28:3:22:1/1:0:33:0:31:1/1:0:33:./.:.:.:.:.:.
chr1	193235430	HG3_PB_SVrefine2Falcon1Dovetail_630	TTAATTCTAAAAGTTTCTAATGCTTTAAATTACAATGTATTAAATAAATATTAGTTTTACTACTTTTAAAATTTACCTGTACATTTGTTGCCAATAATAAGAAAGTTTTAACAAATTTTTAAAGGTCATAGAACAATCATAACTTTTCCCACTGATTAAGATTTAAGATTGCGTTTTGGGGTTTCAGCTTGCATGGCCATTTTTATGGTCCTGCTATGCAAAGCAAGG	T	20	PASS	ClusterIDs=HG4_PB_HySA_1570:HG4_PB_assemblyticsfalcon_1490:HG4_PB_SVrefine2PBcRDovetail_571:HG4_PB_SVrefine2Falcon1Dovetail_662:HG4_Ill_svaba_1258:HG4_Ill_MetaSV_317:HG4_Ill_GATKHCSBGrefine_704:HG4_10X_allpass_174:HG3_PB_SVrefine2Falcon1Dovetail_630:HG2_PB_assemblyticsfalcon_1543:HG2_PB_assemblyticsPBcR_1528:HG2_PB_SVrefine2PBcRplusDovetail_689:HG2_PB_SVrefine2PB10Xhap12_843:HG2_PB_SVrefine2Falcon2Bionano_248:HG2_PB_SVrefine2Falcon1plusDovetail_711:HG2_Ill_svaba_1265:HG2_Ill_manta_294:HG2_Ill_SpiralSDKrefine_1020:HG2_Ill_SVrefine2DISCOVARplusDovetail_851:HG2_Ill_MetaSV_296:HG2_Ill_GATKHCSBGrefine_673:HG4_Ill_Spiral_79:HG2_Ill_Spiral_55:HG3_PB_assemblyticsfalcon_1515:HG2_Ill_Krunchall_1394:HG2_PB_pbsv_1037:HG2_PB_HySA_1996:HG4_PB_pbsv_1051;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_673:HG2_Ill_MetaSV_296:HG2_Ill_SVrefine2DISCOVARplusDovetail_851:HG2_Ill_SpiralSDKrefine_1020:HG2_Ill_manta_294:HG2_Ill_svaba_1265:HG2_PB_SVrefine2Falcon1plusDovetail_711:HG2_PB_SVrefine2Falcon2Bionano_248:HG2_PB_SVrefine2PB10Xhap12_843:HG2_PB_SVrefine2PBcRplusDovetail_689:HG2_PB_assemblyticsPBcR_1528:HG2_PB_assemblyticsfalcon_1543:HG3_PB_SVrefine2Falcon1Dovetail_630:HG4_10X_allpass_174:HG4_Ill_GATKHCSBGrefine_704:HG4_Ill_MetaSV_317:HG4_Ill_svaba_1258:HG4_PB_SVrefine2Falcon1Dovetail_662:HG4_PB_SVrefine2PBcRDovetail_571:HG4_PB_assemblyticsfalcon_1490;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0347826;ClusterMaxSizeDiff=0.0347826;ClusterMaxEditDist=0.0347826;PBcalls=15;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-227;DistBack=-1;DistForward=31983;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:193235431-193235657;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:41:1|0:0:32:26:2:1|0:0:10:38:0:0/1:41:23:./.:.:.:.:.:.
chr1	194060079	HG3_PB_pbsv_1044	CTAGGGATGCTGAGGCAGGAGAATTGCTTGAACCTGAGAGGTGAAGGTTGCAGAGGGCCAAGATCGCACCACTGAACTCCAGCCTGAGCAACAGAACGAGAATCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGTTATCTT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_1053:HG2_PB_assemblyticsPBcR_1537:HG2_PB_SVrefine2PBcRplusDovetail_692:HG4_PB_SVrefine2Falcon1Dovetail_664:HG4_Ill_svaba_1265:HG4_Ill_scalpel_960:HG4_Ill_SVrefine2DISCOVARDovetail_777:HG4_Ill_MetaSV_319:HG4_Ill_GATKHCSBGrefine_705:HG4_10X_allpass_175:HG3_PB_pbsv_1044:HG3_PB_SVrefine2PBcRDovetail_591:HG3_PB_SVrefine2Falcon1Dovetail_635:HG3_Ill_svaba_1297:HG3_Ill_scalpel_1076:HG3_Ill_SVrefine2DISCOVARDovetail_721:HG3_Ill_MetaSV_288:HG3_Ill_GATKHCSBGrefine_700:HG3_10X_allpass_196:HG2_PB_pbsv_1041:HG2_PB_SVrefine2PB10Xhap12_847:HG2_PB_SVrefine2Falcon2Bionano_250:HG2_Ill_svaba_1274:HG2_Ill_scalpel_997:HG2_Ill_manta_296:HG2_Ill_SVrefine2DISCOVARplusDovetail_855:HG2_Ill_MetaSV_297:HG2_Ill_GATKHCSBGrefine_674:HG2_10X_allpass_159:HG2_10X_SVrefine210Xhap12_817:HG4_Ill_Krunchall_1463:HG2_Ill_breakscan11_124;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_817:HG2_10X_allpass_159:HG2_Ill_GATKHCSBGrefine_674:HG2_Ill_MetaSV_297:HG2_Ill_SVrefine2DISCOVARplusDovetail_855:HG2_Ill_manta_296:HG2_Ill_scalpel_997:HG2_Ill_svaba_1274:HG2_PB_SVrefine2Falcon2Bionano_250:HG2_PB_SVrefine2PB10Xhap12_847:HG2_PB_pbsv_1041:HG3_10X_allpass_196:HG3_Ill_GATKHCSBGrefine_700:HG3_Ill_MetaSV_288:HG3_Ill_SVrefine2DISCOVARDovetail_721:HG3_Ill_scalpel_1076:HG3_Ill_svaba_1297:HG3_PB_SVrefine2Falcon1Dovetail_635:HG3_PB_SVrefine2PBcRDovetail_591:HG3_PB_pbsv_1044:HG4_10X_allpass_175:HG4_Ill_GATKHCSBGrefine_705:HG4_Ill_MetaSV_319:HG4_Ill_SVrefine2DISCOVARDovetail_777:HG4_Ill_scalpel_960:HG4_Ill_svaba_1265:HG4_PB_SVrefine2Falcon1Dovetail_664;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.0611621;PBcalls=10;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-163;DistBack=2035;DistForward=-164;DistMin=-164;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:194060080-194060243;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:26:1|0:7:26:16:2:1|0:0:26:24:0:0/1:22:20:./.:.:.:.:.:.
chr1	194350506	HG2_PB_SVrefine2PB10Xhap12_849	CTTACATTTAATGGCACCAGTAGGCTCAATGTAAAGTGATGGAGAAAAATCTATCAAGCGAACAGAAAACAAAAAAGAGTGGAGGTCATTATTCTTACATTAGATGAAGCAGACTTTAAGCCAACAGTAGTTTAAAAATGACAAAGAATGTCATTACATAATGATAAAGGGTTCAATTCAATGAGAAGACTCAACTATCCCAGATATATATTCACCCAACATTGCAATACCCACTTTCATGCAACGAGAATTTCTAGATCTACAAAAAGACTGACACACCCACATAATAAGAATGGAGGACTTCAACACCTCACTGATAGCCTTAGATAGATTATTGAGGCAGAAAACTAACAAAAAAATATTGGATTTAAATTCAGACTTGACCTATGGGACCTAAATTCTTTCTGCACTGCTTTGCTTCAGACACATATATTTTCTACATTTTTTATACTTAAAATATATCTGGGAAACCACTGCCTCTCAGTATACAGAATATAGAAATCTTCCTTATTTCTCATTCAGCTGCTTGGAGCTCTACTAATTGTATGTGCCACAGTATATTTATCGTTAGTTTTTAAAAACCACAATACTAAATACCTTGTTAAGTCCTGATCAATTTGGTCTGGACATCCTAACTTTTCCATTTTACACCGCACAACAAATTCATACTTGTATAACACATTTGGCTAAATTGAAGCGAGTTTTGAAGTGTATTTATGGGCTTATTTTTATTTTTTA	C	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_1543:HG4_PB_assemblyticsfalcon_1502:HG4_PB_SVrefine2Falcon1Dovetail_668:HG2_PB_PB10Xdip_831:HG3_PB_SVrefine2Falcon1Dovetail_638:HG2_PB_HySA_2020:HG2_PB_assemblyticsfalcon_1557:HG3_PB_assemblyticsfalcon_1530:HG2_PB_SVrefine2Falcon1plusDovetail_717:HG4_PB_HySA_1595:HG4_PB_SVrefine2PBcRDovetail_575:HG2_PB_SVrefine2PB10Xhap12_849:HG4_PB_pbsv_1057:HG2_PB_pbsv_1044:HG2_PB_SVrefine2PBcRplusDovetail_694;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_849:HG4_PB_SVrefine2PBcRDovetail_575;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0723684;ClusterMaxSizeDiff=0.0723684;ClusterMaxEditDist=0.101316;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=-737;DistBack=9394;DistForward=7195;DistMin=7195;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:194350507-194351245;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9973;PctRecOverlap=0.9973;SizeDiff=2;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:29:0|1:43:0:0:28:1|0:0:6:55:0:./.:50:4:0/1:59:15:818:.:.
chr1	196158046	HG2_PB_SVrefine2Falcon1plusDovetail_728	CATGGAATTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_1059:HG4_Ill_GATKHCSBGrefine_722:HG3_Ill_GATKHCSBGrefine_710:HG2_Ill_GATKHCSBGrefine_686:HG3_Ill_manta_224:HG2_Ill_manta_301:HG2_Ill_SVrefine2DISCOVARplusDovetail_865:HG4_Ill_MetaSV_326:HG3_Ill_MetaSV_295:HG2_Ill_MetaSV_301:HG4_PB_pbsv_1067:HG4_PB_assemblyticsfalcon_1520:HG4_PB_SVrefine2Falcon1Dovetail_677:HG3_PB_HySA_1629:HG2_Ill_tnscope_113:HG4_PB_SVrefine2PBcRDovetail_583:HG4_Ill_svaba_1288:HG4_Ill_scalpel_977:HG4_Ill_SVrefine2DISCOVARDovetail_786:HG4_Ill_MetaSV_325:HG4_10X_allpass_177:HG3_PB_pbsv_1059:HG3_PB_SVrefine2PBcRDovetail_600:HG3_PB_SVrefine2Falcon1Dovetail_648:HG3_Ill_svaba_1320:HG3_Ill_scalpel_1096:HG3_Ill_SVrefine2DISCOVARDovetail_731:HG3_Ill_MetaSV_294:HG3_10X_allpass_199:HG2_PB_SVrefine2PBcRplusDovetail_703:HG2_PB_SVrefine2PB10Xhap12_858:HG2_PB_SVrefine2Falcon2Bionano_260:HG2_PB_SVrefine2Falcon1plusDovetail_728:HG2_Ill_svaba_1300:HG2_Ill_scalpel_1021:HG2_Ill_SVrefine2DISCOVARplusDovetail_864:HG2_Ill_MetaSV_300:HG2_10X_allpass_161;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_161:HG2_Ill_MetaSV_300:HG2_Ill_SVrefine2DISCOVARplusDovetail_864:HG2_Ill_scalpel_1021:HG2_Ill_svaba_1300:HG2_PB_SVrefine2Falcon1plusDovetail_728:HG2_PB_SVrefine2Falcon2Bionano_260:HG2_PB_SVrefine2PB10Xhap12_858:HG2_PB_SVrefine2PBcRplusDovetail_703:HG3_10X_allpass_199:HG3_Ill_MetaSV_294:HG3_Ill_SVrefine2DISCOVARDovetail_731:HG3_Ill_scalpel_1096:HG3_Ill_svaba_1320:HG3_PB_SVrefine2Falcon1Dovetail_648:HG3_PB_SVrefine2PBcRDovetail_600:HG3_PB_pbsv_1059:HG4_10X_allpass_177:HG4_Ill_MetaSV_325:HG4_Ill_SVrefine2DISCOVARDovetail_786:HG4_Ill_scalpel_977:HG4_Ill_svaba_1288:HG4_PB_SVrefine2PBcRDovetail_583;NumExactMatchSVs=23;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.116981;PBcalls=13;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-277;DistBack=-278;DistForward=-265;DistMin=-278;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:196158047-196158337;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:1:11:0:6:./.:0:4:0:13:1/1:0:37:./.:.:.:.:.:.
chr1	197500508	HG4_PB_SVrefine2Falcon1Dovetail_681	TAACAAATCTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTCATTTATTTTTATTTTATTTTATTTTATTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATACTATCCCTTCCCCCTCCCCCAACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGACTGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCGTAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAAGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATGGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCATCCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_126:HG3_10X_allpass_201:HG2_10X_allpass_162:HG2_PB_assemblyticsfalcon_1590:HG2_PB_assemblyticsPBcR_1576:HG4_PB_assemblyticsfalcon_1532:HG3_PB_assemblyticsfalcon_1564:HG4_10X_allpass_178:HG4_PB_pbsv_1070:HG4_Ill_Krunchall_1496:HG2_Ill_Krunchall_1441:HG2_Ill_tnscope_114:HG4_PB_SVrefine2PBcRDovetail_587:HG4_PB_SVrefine2Falcon1Dovetail_681:HG4_Ill_SVrefine2DISCOVARDovetail_792:HG4_Ill_MetaSV_328:HG4_Ill_GATKHCSBGrefine_724:HG3_PB_pbsv_1064:HG3_PB_SVrefine2PBcRDovetail_605:HG3_PB_SVrefine2Falcon1Dovetail_652:HG3_Ill_SVrefine2DISCOVARDovetail_741:HG3_Ill_MetaSV_297:HG3_Ill_GATKHCSBGrefine_713:HG2_PB_pbsv_1062:HG2_PB_SVrefine2PBcRplusDovetail_708:HG2_PB_SVrefine2PB10Xhap12_862:HG2_PB_SVrefine2Falcon2Bionano_264:HG2_PB_SVrefine2Falcon1plusDovetail_733:HG2_Ill_SVrefine2DISCOVARplusDovetail_870:HG2_Ill_MetaSV_303:HG2_Ill_GATKHCSBGrefine_690:HG2_10X_SVrefine210Xhap12_828;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_828:HG2_Ill_GATKHCSBGrefine_690:HG2_Ill_MetaSV_303:HG2_Ill_SVrefine2DISCOVARplusDovetail_870:HG2_PB_SVrefine2Falcon1plusDovetail_733:HG2_PB_SVrefine2Falcon2Bionano_264:HG2_PB_SVrefine2PB10Xhap12_862:HG2_PB_SVrefine2PBcRplusDovetail_708:HG2_PB_pbsv_1062:HG3_Ill_GATKHCSBGrefine_713:HG3_Ill_MetaSV_297:HG3_Ill_SVrefine2DISCOVARDovetail_741:HG3_PB_SVrefine2Falcon1Dovetail_652:HG3_PB_SVrefine2PBcRDovetail_605:HG3_PB_pbsv_1064:HG4_Ill_GATKHCSBGrefine_724:HG4_Ill_MetaSV_328:HG4_Ill_SVrefine2DISCOVARDovetail_792:HG4_PB_SVrefine2Falcon1Dovetail_681:HG4_PB_SVrefine2PBcRDovetail_587;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00835301;ClusterMaxSizeDiff=0.00835301;ClusterMaxEditDist=0.00835301;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2763;DistBack=2129;DistForward=-2752;DistMin=-2752;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=1:197500509-197503283;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=232.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:147:1/1:0:24:0:32:1/1:0:29:0:22:1/1:0:53:1/1:2:181:2774:.:.
chr1	198773749	HG3_PB_SVrefine2Falcon1Dovetail_658	TCTACCAATTAATTTTGGTTTTGTTTGCTTGTTGGTAGTTTGTTGTATATACATTTTTCTTAATGCTCTTGTTTTATCAATTCTTTCAGAGTGTTTAGGATCTGGATAATTTTTAAAAATTATTTAAGCAGGATTCTAACAATATTATGGCTAATGTTACCTTTTCCCCTAATTCTTAGATTACTGACATAAAACAACTTTCTTTTGTGTGTCTAAGTTAGCTTTAATAAACAGAGACACAGAAAAATTTATTTTTCTAGCAGACCTTTTTCTTCCTTTCTCCCTTCCTCCTGACTTCCTTTCACTTAGTAGTTTTTCTAGCATTTTTCTGCTAATTTTAAAAATTTTGATCTTGATTTTTAATCTCTATTCCCATGTCTTTCTGTATGTGAATTTTAAAGGAAAATAGATATAGACCCTTATATGAGTCTTAGTTTTGTCAAATGTTTGCTTACCAATGGCCCCTGATACCAAGATAAAGCACATTTCGATGGAAGAGAAATGGATCTGATAACTAAAGAGAGTTGGTTCTCTATGTTACTCTCATATGAGAGACTAGTGTTATAGGTTGAATTCCTCCAAAATTCACAGGTTAAAGTCCTAACTCCCAGGACTTCACATGTGACTATATTTGGAGAAAGGGGGCATTTTAAGAGATTATTAAGTTTAAAATGAGATCCTTATGGTGAACCTTAACCAATATGACTGGTGTCTTTATAAGAAGCATAGAGTAAAACACACATATTCAAAGGGAAGACCATGTGAATTCAGAGGAAGAAGATGGCTATCTACAGCCAAGGAGAGAGGCTTCCAGAAGAAATCAATCCTGCCAATACCTGGAGCTTAGAGTTATAGCCTTCAGAATTATGAAAAAATAAATTTCTGTTGTCCAAGCCCTCCAATCTGTGGTACTTTGTTATGGTAGCCCTACCAAATGAATACAATTGGTTTAATATATATCACTATTTCTTCATGAGACTCAGGGGTGCAAGTGTAAAATGTAAGTGCAAAATGACATTATTCTGTTTTTCATTCAGTCAGTAGTTACCAAGAAGCATCTTACCACACCGACCAAGACAGGAAACCAGAGATCCCTACCTTCATGGAGCTTACTGAAATGTTATGTGCAAAAATGTTTTGTAAGTAAAATTGTTAAATGCGTTTTTTGTATTATTGAAAGCATTTTTATTTTCAAAGTCAGAAATGGAAAGGGCTGCATTAGTAGGAAGGTTGAATTGGAAAACTAAATATTATTACATGTATTGATCTCCATAGTAATCATTAACATTTATTGAACACTATGTGCTAGGCACTTTTTGTTTGTTTGTTTGTTTGAGACAGAGCCTTGCTCTGTTACCAGGCTGGAGTGCAGTGGTAGGATCTCAGTTCATTGCAACCTCCACCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTGCCAAGTAGATGGGACTACAGGTGCCCACCTCCACACCCAGCTAATTTTTGTATTTTTAGTAGAGACGGCGTTTCACCATGTTGGCCAGGATGGTCTCGATGTCTTGACCTCGTGATCCCCCCACCTTGGCCTCCTAAAGTGCTGGGATTACAGACACGAGCCACCGTGGCCAGGCACTATTTTAAGAGTTTTGTTAGCAATAGCTTATTTTATTTTCATAACAACACA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_711:HG4_PB_assemblyticsfalcon_1540:HG4_PB_SVrefine2Falcon1Dovetail_686:HG2_Ill_tnscope_117:HG4_PB_pbsv_1076:HG4_PB_SVrefine2PBcRDovetail_593:HG4_Ill_GATKHCSBGrefine_729:HG3_PB_SVrefine2Falcon1Dovetail_658:HG2_PB_pbsv_1068:HG2_PB_assemblyticsfalcon_1599:HG2_PB_SVrefine2PB10Xhap12_869:HG2_PB_SVrefine2Falcon2Bionano_269:HG2_PB_SVrefine2Falcon1plusDovetail_738:HG2_PB_PB10Xdip_858:HG2_Ill_SpiralSDKrefine_1051:HG2_Ill_SVrefine2DISCOVARplusDovetail_878:HG2_Ill_MetaSV_309:HG2_Ill_GATKHCSBGrefine_693:HG2_10X_SVrefine210Xhap12_834:HG2_10X_allpass_163:HG3_PB_assemblyticsfalcon_1577:HG4_Ill_MetaSV_333:HG4_Ill_Krunchall_1505:HG2_Ill_Krunchall_1446:HG2_PB_assemblyticsPBcR_1587;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_834:HG2_Ill_GATKHCSBGrefine_693:HG2_Ill_MetaSV_309:HG2_Ill_SVrefine2DISCOVARplusDovetail_878:HG2_Ill_SpiralSDKrefine_1051:HG2_PB_PB10Xdip_858:HG2_PB_SVrefine2Falcon1plusDovetail_738:HG2_PB_SVrefine2Falcon2Bionano_269:HG2_PB_SVrefine2PB10Xhap12_869:HG2_PB_assemblyticsfalcon_1599:HG2_PB_pbsv_1068:HG3_PB_SVrefine2Falcon1Dovetail_658:HG4_Ill_GATKHCSBGrefine_729:HG4_PB_SVrefine2PBcRDovetail_593:HG4_PB_pbsv_1076;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0489752;ClusterMaxSizeDiff=0.00692042;ClusterMaxEditDist=0.160149;PBcalls=14;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1665;DistBack=-1666;DistForward=28866;DistMin=-1666;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:198773750-198775414;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=233.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:0|1:35:0:5:27:0|1:74:0:0:34:0/1:51:18:0/1:177:72:1627:.:.
chr1	199438726	HG2_PB_SVrefine2Falcon1plusDovetail_742	TAAAAATATTGGGTCTCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTGGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGCACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAATAAATAAATAAATAAATAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_127:HG2_10X_allpass_164:HG2_Ill_Krunchall_1452:HG2_PB_assemblyticsPBcR_1592:HG4_PB_pbsv_1080:HG2_Ill_tnscope_118:HG4_PB_SVrefine2PBcRDovetail_595:HG4_PB_SVrefine2Falcon1Dovetail_688:HG4_Ill_SVrefine2DISCOVARDovetail_803:HG4_Ill_MetaSV_334:HG4_Ill_GATKHCSBGrefine_731:HG4_10X_allpass_179:HG3_PB_pbsv_1072:HG3_PB_SVrefine2PBcRDovetail_610:HG3_PB_SVrefine2Falcon1Dovetail_660:HG3_Ill_MetaSV_299:HG3_Ill_GATKHCSBGrefine_719:HG3_10X_allpass_203:HG2_PB_pbsv_1072:HG2_PB_SVrefine2PBcRplusDovetail_715:HG2_PB_SVrefine2PB10Xhap12_872:HG2_PB_SVrefine2Falcon2Bionano_273:HG2_PB_SVrefine2Falcon1plusDovetail_742:HG2_Ill_MetaSV_310:HG2_Ill_GATKHCSBGrefine_695:HG2_10X_SVrefine210Xhap12_837;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_837:HG2_Ill_GATKHCSBGrefine_695:HG2_Ill_MetaSV_310:HG2_PB_SVrefine2Falcon1plusDovetail_742:HG2_PB_SVrefine2Falcon2Bionano_273:HG2_PB_SVrefine2PB10Xhap12_872:HG2_PB_SVrefine2PBcRplusDovetail_715:HG2_PB_pbsv_1072:HG3_10X_allpass_203:HG3_Ill_GATKHCSBGrefine_719:HG3_Ill_MetaSV_299:HG3_PB_SVrefine2Falcon1Dovetail_660:HG3_PB_SVrefine2PBcRDovetail_610:HG3_PB_pbsv_1072:HG4_10X_allpass_179:HG4_Ill_GATKHCSBGrefine_731:HG4_Ill_MetaSV_334:HG4_Ill_SVrefine2DISCOVARDovetail_803:HG4_PB_SVrefine2Falcon1Dovetail_688:HG4_PB_SVrefine2PBcRDovetail_595;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0219927;ClusterMaxSizeDiff=0.0219927;ClusterMaxEditDist=0.0219927;PBcalls=12;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1507;DistBack=3028;DistForward=-1500;DistMin=-1500;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=1:199438727-199440250;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:45:0|1:34:4:0:42:0|1:43:0:0:25:0/1:38:27:0/1:132:63:1744:.:.
chr1	202001636	HG4_PB_SVrefine2Falcon1Dovetail_693	CGGCTCACACCTGTAATCCTAGCACTTTAGGAGGCCTAAGGAGGATCGCTTGAGGCCGAGAGTTTGAGACCAGCCTGGTCAACATAGGGAGACTCCGGTCTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_849:HG4_PB_pbsv_1093:HG2_PB_SVrefine2Falcon2Bionano_280:HG4_PB_SVrefine2PBcRDovetail_599:HG2_PB_pbsv_1086:HG3_PB_pbsv_1085:HG4_PB_SVrefine2Falcon1Dovetail_693:HG3_PB_SVrefine2PBcRDovetail_615:HG3_PB_HySA_1674:HG3_10X_allpass_204:HG2_PB_SVrefine2PBcRplusDovetail_721:HG2_PB_SVrefine2PB10Xhap12_882:HG2_PB_SVrefine2Falcon1plusDovetail_746:HG2_Ill_manta_306:HG2_Ill_SpiralSDKrefine_1065:HG2_Ill_SVrefine2DISCOVARplusDovetail_891;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_849:HG4_PB_SVrefine2Falcon1Dovetail_693:HG3_PB_SVrefine2PBcRDovetail_615:HG3_PB_HySA_1674:HG3_10X_allpass_204:HG2_PB_SVrefine2PBcRplusDovetail_721:HG2_PB_SVrefine2PB10Xhap12_882:HG2_PB_SVrefine2Falcon1plusDovetail_746:HG2_Ill_manta_306:HG2_Ill_SpiralSDKrefine_1065:HG2_Ill_SVrefine2DISCOVARplusDovetail_891;NumExactMatchSVs=11;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.0808081;PBcalls=11;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-101;DistBack=4157;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=100;REFWIDENED=1:202001637-202001837;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=236.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:45:1/1:2:15:3:24:./.:0:5:0:9:1/1:0:36:./.:.:.:.:.:.
chr1	202709321	HG3_PB_SVrefine2Falcon1Dovetail_670	CCCTCACCTCCCGGACGGGGCGGCTGGCCGGGTTGGGGGCTGACCCTCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTTCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGTGGCCGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCAGCCGGCCGGGTGGGGGTCTGACCCCCCCA	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_895:HG4_PB_pbsv_1098:HG2_PB_pbsv_1091:HG3_Ill_MetaSV_301:HG4_Ill_GATKHCSBGrefine_745:HG3_PB_pbsv_1089:HG3_Ill_GATKHCSBGrefine_726:HG2_Ill_GATKHCSBGrefine_708:HG4_PB_SVrefine2PBcRDovetail_603:HG4_PB_SVrefine2Falcon1Dovetail_700:HG4_Ill_SVrefine2DISCOVARDovetail_816:HG3_PB_SVrefine2PBcRDovetail_617:HG3_PB_SVrefine2Falcon1Dovetail_670:HG3_Ill_SVrefine2DISCOVARDovetail_761:HG2_PB_SVrefine2PBcRplusDovetail_727:HG2_PB_SVrefine2PB10Xhap12_888:HG2_PB_SVrefine2Falcon2Bionano_283:HG2_PB_SVrefine2Falcon1plusDovetail_753;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_895:HG4_PB_SVrefine2PBcRDovetail_603:HG4_PB_SVrefine2Falcon1Dovetail_700:HG4_Ill_SVrefine2DISCOVARDovetail_816:HG3_PB_SVrefine2PBcRDovetail_617:HG3_PB_SVrefine2Falcon1Dovetail_670:HG3_Ill_SVrefine2DISCOVARDovetail_761:HG2_PB_SVrefine2PBcRplusDovetail_727:HG2_PB_SVrefine2PB10Xhap12_888:HG2_PB_SVrefine2Falcon2Bionano_283:HG2_PB_SVrefine2Falcon1plusDovetail_753;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00884956;ClusterMaxSizeDiff=0.00884956;ClusterMaxEditDist=0.0309735;PBcalls=11;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-226;DistBack=-331;DistForward=-32;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=195;REFWIDENED=1:202709322-202709742;PctSeqSimilarity=0.9406;PctSizeSimilarity=0.9956;PctRecOverlap=0.7797;SizeDiff=1;StartDistance=-50;EndDistance=-49;GTMatch=0;TruScore=90;MatchId=237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:1:15:2:21:./.:10:3:5:2:0/1:16:11:./.:.:.:.:.:.
chr1	203342335	HG4_Ill_Krunchall_1548	TTTCCTTCCTTTCTTCCTTCCTTTCTCCTTCCTTCCTTTCTCCCTTCCTTCCTTCCTTCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_1091:HG3_PB_HySA_1682:HG4_PB_HySA_1659:HG2_PB_HySA_2122:HG4_Ill_GATKHC_1736:HG4_Ill_GATKHCSBGrefine_746:HG3_Ill_GATKHC_1806:HG3_Ill_GATKHCSBGrefine_727:HG2_Ill_GATKHC_1783:HG2_Ill_GATKHCSBGrefine_709:HG4_Ill_manta_265:HG2_PB_PB10Xdip_891:HG4_PB_assemblyticsfalcon_1580:HG2_PB_assemblyticsPBcR_1622:HG3_PB_assemblyticsfalcon_1620:HG2_PB_assemblyticsfalcon_1639:HG3_Ill_Krunchall_1516:HG4_Ill_scalpel_1019:HG4_Ill_Krunchall_1548:HG4_Ill_250bpfermikitraw_1458:HG4_Ill_150bpfermikitraw_1409:HG3_Ill_scalpel_1133:HG3_Ill_250bpfermikitraw_1460:HG3_Ill_150bpfermikitraw_1385:HG2_Ill_scalpel_1059:HG2_Ill_250bpfermikitraw_1483:HG2_Ill_Krunchall_1489:HG2_Ill_150bpfermikitraw_1365:HG4_PB_pbsv_1100:HG2_PB_pbsv_1093;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1483:HG2_Ill_scalpel_1059:HG3_Ill_150bpfermikitraw_1385:HG3_Ill_250bpfermikitraw_1460:HG3_Ill_scalpel_1133:HG4_Ill_150bpfermikitraw_1409:HG4_Ill_250bpfermikitraw_1458:HG4_Ill_Krunchall_1548:HG4_Ill_scalpel_1019;NumExactMatchSVs=9;ClusterMaxShiftDist=0.352941;ClusterMaxSizeDiff=0.352941;ClusterMaxEditDist=0.356436;PBcalls=11;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=-59;DistBack=106411;DistForward=-9;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=118;REFWIDENED=1:203342277-203342453;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:93:1/1:3:42:3:50:./.:0:13:8:14:./.:4:48:./.:.:.:.:.:.
chr1	203552921	HG4_Ill_SVrefine2DISCOVARDovetail_820	AGAGTGAGAGAGAGGAAGGTGGGAACGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAAGGAAGGAAGGAGAGAGAGAAGGAGGAAGGGAGGGAGGAAGGAAG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_891:HG2_PB_SVrefine2Falcon2Bionano_286:HG2_PB_pbsv_1095:HG4_Ill_150bpfermikitraw_1414:HG4_Ill_SVrefine2DISCOVARDovetail_820:HG2_PB_SVrefine2PBcRplusDovetail_730;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_891:HG4_Ill_SVrefine2DISCOVARDovetail_820:HG2_PB_SVrefine2PBcRplusDovetail_730;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0478469;ClusterMaxSizeDiff=0.0478469;ClusterMaxEditDist=0.125604;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-101;DistBack=21813;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=217;REFWIDENED=1:203552922-203553239;PctSeqSimilarity=0.8929;PctSizeSimilarity=0.9619;PctRecOverlap=0.4623;SizeDiff=-4;StartDistance=-53;EndDistance=-57;GTMatch=0;TruScore=77;MatchId=239.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:22:1|0:0:22:22:1:0/0:17:1:31:1:0/0:22:2:./.:.:.:.:.:.
chr1	203684276	HG3_10X_allpass_207	ACCTGTAATCCCAGCTACTCGGGAGGCTGAGGTAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAGCGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGTGACAAAGCTAGACTCTGTCTCAAAAAACAAAAGAGATTCCCCCTCATTGACTATTTGATTACTCTGAGGCGGGCAGATCGCCTGAGGTCAGGAGTTCGAGACCAGTCTAGCCAGCATGGTGAAACCCCAGCTCTACTAAAAATACAAAAATTAGCTGGGCATGATGGTAGGCGCCTGTAATCCTAGCTACTCCGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTACGATGAGCCGAGTTAGCACCACTGCACCCCAGCCTGGGTGACAGAGCAAGATTCCGTCTCAAAAAAAATTTTCTTTTCATTATATGGGGGGATGGTGTGGGGCAAAAAAAAAAATTTCATTATATGCCTCTAAATAATAATTATATATCAATAATCTATATATCTAAAAGAATCTTAATACCATTATCTCAGAACAAAATCGATGCTTCCTTACTATCATGAAATTTCTAGTTTGTTCACATTTTCCTAACTGACTCAAATGTTTTTATAGTTTATTTGCCCAAATCAGGATTCAGATAAGATCCATAACTTGCAGTTATTTGATACATCTGTTAAGTCTCTTAACCTATCTCTTGGAGTGCGCCTCCTTCCAGCTGTACCAGTAGCTGTACTAGCTGTATAGTAGGTTTCTATACAAACCCATAGAATGCAGATTCACCCACTCAGGCCCCACCCCAGATTTACTGAATTGGAAAGCCGGGAACTGGGGCCCAGAAATCTTAATTAATTATGTTAAATCTGTTAAATGTGTTTTGACAGGCTCTCTCAGTGATTCTATGTACCCTAAACTTTAAGAATCACTGATCTTATAGGATCTCTATGTTGGGAGTCCCCAAAAACACCCCTATATTCATGGGGTTGCTAGGAGGACTCATGGGACTTGGCATATAGTTGTACTCATGACTAAGATTCATAACAGTGATGTAGTAAGAATACAGTTGGATCATAAAAGAAAAAGACAATGGCAGAATCTGGATAAATCTATTTGCAGTCTTTCTTATGCTCTCCCTCCCATGAGGAGTCAAACAGAGTCCATTCTTTCCCCACTAATGAAAACACAGAAATATATGTGTGATGTTCTGCCTAGGGAAGCCCATCATGGACTTAGTACCCAAGGTTTTTCTTGAGGCTGGTCACATAGGCACCTTCTGCCTAGCACATACCAAAATTCCAGACTCCCAAAAGGAAAGCAAATGTTCAATGTAAACCACATTGTTCGGACACAGTCTAGACACAATGAGCCACCTTTATCAGTTAGTTGTTGAGGGCAAGCATTCTGAGAGCCCATTTCCCAGAAGCCAGCCAAGGGCCCACCCTGCAAGCATTCCTTCCTAAGGACAGTCGTCTCAGGCCTGCTGTGTTAACTCTCTTTTGCACAATCCCCCTCCATCTTTTTTCCTAGCAACTTAGTTTTGAAGGAAGTGGGTTGTTTGTCTGCAGAGACTATCCCTCAGTATAGATTTTGTTGATTATTTCACTGTGATTTCCTTTAACGTATTATTTTCTTCCTTATATTTCCTATAAGCAAGTAGTTGGTTCTAGAAGTTATCAGATTCTAGACCCTTTCTTTCATTGAGGGCTGCAAAATGACAATATTGTAATTCTTTATTTATTAACTTAAATACTTACATAAAAAGAGATTCCCGGCCGGGCGTAGTGGCTCGTGCTTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAAACAGTGAAACCCGTCTCTACTAAAAACACAAAAATTAGCTGGGCATGATGGCGGGCG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_314:HG3_PB_pbsv_1094:HG4_PB_assemblyticsfalcon_1584:HG3_PB_assemblyticsfalcon_1624:HG2_PB_assemblyticsPBcR_1627:HG2_10X_allpass_166:HG4_PB_SVrefine2Falcon1Dovetail_704:HG3_PB_SVrefine2PBcRDovetail_621:HG3_PB_SVrefine2Falcon1Dovetail_674:HG3_Ill_SVrefine2DISCOVARDovetail_767:HG3_Ill_GATKHCSBGrefine_728:HG3_10X_allpass_207:HG2_PB_pbsv_1096:HG2_PB_SVrefine2PBcRplusDovetail_731:HG2_PB_SVrefine2PB10Xhap12_892:HG2_PB_SVrefine2Falcon2Bionano_287:HG2_10X_SVrefine210Xhap12_858:HG3_Ill_MetaSV_304;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_858:HG2_PB_SVrefine2Falcon2Bionano_287:HG2_PB_SVrefine2PB10Xhap12_892:HG2_PB_SVrefine2PBcRplusDovetail_731:HG2_PB_pbsv_1096:HG3_10X_allpass_207:HG3_Ill_GATKHCSBGrefine_728:HG3_Ill_SVrefine2DISCOVARDovetail_767:HG3_PB_SVrefine2Falcon1Dovetail_674:HG3_PB_SVrefine2PBcRDovetail_621:HG4_PB_SVrefine2Falcon1Dovetail_704;NumExactMatchSVs=11;ClusterMaxShiftDist=0.227902;ClusterMaxSizeDiff=0.227902;ClusterMaxEditDist=0.227902;PBcalls=11;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1923;DistBack=28462;DistForward=-1914;DistMin=-1914;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=174;REFWIDENED=1:203684277-203686373;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:26:0|1:37:0:0:30:0|1:36:0:0:35:0/1:59:31:0/1:174:71:1925:.:.
chr1	203894270	HG2_PB_SVrefine2Falcon1plusDovetail_759	AGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGTGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCACCTGGGTGACAGAGCAAGATTCTGTCTCAAAAACAAAGAAAAAGAAAAAGAAAAGAAAAATGTTTATAAGGTCTTCAGGTGCAAGAAAATGGAGGAAACAAGATGAGTTGAGCATATAGACATGGGTACGATTTGGAGAAAGGCCTGAGAGAAAGCTTCAAGCTATGGGATCTATATCTTTTCCTAGGAAGCAAGAGAAGTGCTAGTAGATAATTTGTTATTATCCCTACTAAACTGAACTTTTCTTATTTCTGGTTATTTCACCTCCCCACCATATAGATGTAGTGTTCTGTTTTTACGTGTGTAAAGTGTATACCACCTTTCCTCACTACTCATCTTAATTCTATCTTTCATTGAAACCTAGCTGAAGTCCTTTTCAGTTTTCAGCCCTGTTCATGATGAACTCTCCCTTCTGAACTTCTCTAGCATTTATTTAGCCTAAATCCTGTGTACTACCTTTTAGCTTGTTACTTTTATTAATGATAATTATGGTGATGATACAGGCAACATTAATGACATATGGCATTGACAATATATATGAGTTATCTGAGAGGCCAGGCACAGTGGCCCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGGGGATTGGATCATCTGAGGGCAGGAGTTCAAGACCAGCCTGACTAACATGGTGAAATTCCGTCTCTGCTAAATACAAAAAAATTAGTCAGGGTGATGGTGGGCATCTGTAATCCCAGCTACCCAGGAGGCTGAGACAGGAGAATTGTTTGAATTCGGGAGGCAGAGGTTGCAGTGAGTCGAGATTGCACCACTGCACTCCAGCTTAGGTGACAGTGCGAGACTCCGTCTCAAAAAAAAAAAAAGAATTATCTGAGAATGATGAAACTTTGAGCAAGGTGACTCATTTCTAAGAAGAGATACGATAAAAGCCAACTATAGAAGCTAAAGAATGAAGTGCAGCCATGTATTGCTTAATGATGGGGATACTTTCTGAGAAGTGCATTGTTAGATGATTTTGTTGTTGTATGAACATCATAGAATATACTGGCATAAACCTAGATGGCATGGCCTACTACACATCTAGGCTGTGTGATATAGTTTATTGCTCCTAAGATACAAACCTACAGAATACTGTAGGCAGTTGTAATAGGATGGTATGTATTTGTGTATTTAAATGTATCTAAACATAGGAAAGTACAGTAAAAACATAGTATAAAAGATTAAAAATCGTATAGGGCACTTACCAAGAATGGAGCTTGCAGGATTGGAAGTTGCTCTGGGTGAGTCAGTGAGTGAGTGAGTGGTGAGTGAATGTGAAGGCCTAGGACATTACTGTACACTGCTGTAGACTTTGTAAACACTGCACACTAGGCTG	A	20	PASS	ClusterIDs=HG2_PB_HySA_2135:HG2_10X_allpass_168:HG3_PB_pbsv_1099:HG2_Ill_MetaSV_316:HG3_10X_allpass_209:HG2_PB_pbsv_1100:HG3_PB_SVrefine2PBcRDovetail_623:HG2_PB_SVrefine2PBcRplusDovetail_735:HG2_PB_SVrefine2PB10Xhap12_896:HG2_PB_SVrefine2Falcon2Bionano_289:HG2_PB_SVrefine2Falcon1plusDovetail_759;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_759:HG2_PB_SVrefine2Falcon2Bionano_289:HG2_PB_SVrefine2PB10Xhap12_896:HG2_PB_SVrefine2PBcRplusDovetail_735:HG3_PB_SVrefine2PBcRDovetail_623;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0549521;ClusterMaxSizeDiff=0.0549521;ClusterMaxEditDist=0.0549521;PBcalls=8;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-1606;DistBack=2131;DistForward=-1602;DistMin=-1602;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=246;REFWIDENED=1:203894271-203896122;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9975;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:39:0|1:27:0:1:36:0|1:72:0:1:14:./.:38:2:0/1:139:39:3869:.:.
chr1	203935832	HG3_PB_SVrefine2Falcon1Dovetail_676	GCAGTGAGCCGAGATCATGCTGCTGCACTCCAGCCTGGATGATGGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAATTTACATTACCATGCCTTCTTATAGTCTTTTACCAAAAACACATTTCACTCTCCTCACACACCTTACACGTACAGTTATTTTTTTATTAATTTCAATTACATGTTATAATGGTAATTCTTAGCAACTTTTACTTTTGGTGTATAAATTTCCTTTCACAACTTACACAGACTATCTACAACATGCTTGGACTTTCTGACTTGTCCTAAAAATCCTTTTTTTTTTTTTTTTAAATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAAGCTCCACCTCCTGGGTTCATGCCATATTCCCACCTCAGCATTCCGAGTAGCTAGGACTACAGGTGCCCACCACCATGCCTGGCTAATTTTGTTTTTGTATTTTTAATAGAGACGAGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCTTGACCTCATGATCCACCCGTCTCAGCCTCCCAAACTGCTGGGATTACAGGCATGAGCCACCTTGCCCAGCCAACATCTTTCTTTTTAAACAACCAGTTATTTTACTTTAGGACAAGATTTTACCATACAAGATTCTTTTTTTTTTTTTGAGGTGGAGTTTCACTCTTGTTGCCCAAGCTGGAGTGCAATGGCATGATCTTGGCTCACTGCAACCTCTTCGTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCATGCCACCACGCTTGGCTCAGTTTTTCTATTTTTAGTAGAAACGGGGTTTTACCATGTTAACCAGGCTGGTCTCAAACTCCTGACATCAGGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTGCAGGTGTGAGCCACTTCACCCAGCCACAAGATTTTTTCTTTTCTTTTTTTTTTCTTAGAGATGGAGTCTCGCTCTGTTGCCAGGCTGGAGTGCAGTGGCGCAGTCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACGTGCCACCACACCGGCTAATTTTTATATTTTTAGTAGAGATGGGGTTTCACCATGTTTGCTAGGCTGGTCTTGAACTCCTGACCTCATGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTACGCCCAGCCACAAAATTCTTTCTTATATAAAATACATTTTCTTTATAACTTTCTTTGCATAGCTAGGGGGCATGGCTAATTCCACATGCCCCAGGACTTATCTAGAATCTAATGTCTCCAAGCTAGGCAAATTGAACAATTTTGAAAAGTCAAAGCAGTTTATGACCTTAAAACATTTAGCAAACCTAGTATCTAACCTCCCTAATTTAGACCAAATGTCTTTATTTTTGCCAATAATCTTTAAAACTTTTTATTTCCCAAAGATTACTAAAGTTACATGAACTAAAAGGCATTATAGTTTTTATTTTTCTTTCAAAATATTTGATTTAAGTGCTTATTTTTCTTAAAGCCAATTAATTAGAGCTCTTTTATATAAACATTACACACACAACAAATATATAACTACACAGACAGACAGAAGAAGATCCAGTAGTTGCAGTAGTTGTAAGATTTTTCATTTACCAGTTTCTAAGTTTCTTTTTTTTTTGGATGAAGTCTAGCTCTGTCACCCAGGCTGGAGTACAGTGGTGCAAACTCGGCTCACTGCACCCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGTTGCATACCACCATGTCTCGCTAATTTTTGTATATTTAGTAGAGACGGGGTTTCACCATGTTGGTCATGCTGGTCTTGAACTCCTGACCTCAGGTGATCCATACACTTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCTGGCACCAGTTTCTAAGTTTCTTAATTGGATTACTGGCTTTACAGTGGAGTCCTTGGAAGAACAGGGCCAGGAAAGCATACAGTTTCTAGGGCCTAATATAAAAAGCAGGCACAGCCAGAAAGCAAAACATCTCCAATAATTAAGTCCCATTGTTATACCAGATCCTGGATCCCCTCCAAAAAAGAGGGCGTCAACCCATCCCCATGGGAGTCTTATTTCTCAGTCGGGGGTGGAGACATCTCCATACTTCTGTGTGGCCAAGAGCATGCTTCTCTGGTCCAAATGTGCAGAGCTGAGTATTTCCCCATAACTGTAACTAGACATCCCTAAAAGTATATTGCCTACTTAGTTATTACACAACAAAGCTCTCTCATAATGTGAAATAATAATTTCTGATACTCCCAAAGTAAAAAATGTCAGATAATGCAATGCAAAACAGAACACAGCCTTAGATTTTGAAAAGCATCTATCCACTTCCAATTCTGAAATCCCAGGAATTGGAAGCAGAGGAAAACAGAGGTTTTTCCCAAAACAGAATCTCTTGTATCTATTGTTTTTCCCAAGGAGTCCCAGGCTGTTAGAGCTTGAATATCCACTTTTAATTAAGCTGACTTTAAAAGTCCTTTTAAATTTCTTATTACCTGACTTTAGCCAGAACAAATGGCTGATATTTCTGGCTCTTAAACTTTACCAAAAGTAACCTCACAGGTGCTCTGATAAAGGAAAATTCAAGACAGTTTGTGGAGGGGAAGAGAATCAAAAAATGGCAAACGTTACCCAAATATCAACCAGAAAGTACTCATTCCCTAAGCTGGGAATTGAACCTGGGCCACAATTTTAAAATGGTGGAGACCAAAAGAAAGTACTGCCACGTAGTTACAAGGTCAAGCACCAAGGACATACTAGACAAGATAGAGACTTCATCCAGTTTTTTTTTTCAAGGACCTGCAGCAAAGTTTATTGCTGACCAGTTTTGCTGGGCCCTCCTGATGGGGTCCTAAGCCCGCATTCTATCCTAAGGTACCCCTCGTTATGACACAACAATATGGAAAGACACAAAAAGCACAATACAGCTTACGATTAGCCTCATGAATCATTTTTTCAATTAATCAAAACTTTACAGAGGAGATAAACAATGATTTTTACCATTCATTCAGCCAGTCTGCACAGAGAGAGAGAGGAAGAGAGGGGCCAGAAGCCTGACTAGTAAGAAATTCTTACCCTTTGGCCTGCATGCCAGGCTTCTGGGTTCCCTTTCCCTTCGTGGCCCTAGTGACCAAGATCTCCACACCATAGCCCTAGGGGCCAAGCCACATCATAAAGGAAAATCATATTTTTCTGTTTCAAGGAACCACAGGCAAAAGCCTCTGAATTTTGCAAGATGCCGCTCAACCGGTTGCATGGAGGCACCAAATATCAAACTGGCAAGGCTCAAACTTGACCCTGATTGGGCCCTGTCATCTTTAACCCATTTTAACCAAGAGGGACTTTACTGAGGGGAGGGTCTCTAACCCAATCCCATCCTTTACTCAGGTAAATGTACTCCATTACTTATCCAAAGTCAGCCTATTGGTGCTTCAGCAGTCTATTTCCTTTGGATCAGGATGGTAACTACGCTAAAAGGTTATCAGATTTAATATTTGAGAGTCTTTGTTTTAAAATGCACTTCAATGCATTGTTGTTCATTCAGAACATTCCATTGTACGTTGTCTTTAGTAAGATCTTGCCATTTCTGTAAGACTTTGCTGCTTTCTGTGCCTAATGCATAAGCCAGAAGGAACTCAGTTTTCCAGAAATTAAGGATCCCATTTTTACCTAAAATATTGGTTTTACTCTCCAGTTCCCTTGATTAACTTAGCCAATGGGTTTTTTCCTACTGCAAGAAAAATGAAACAAAGGGGTAGAACACAAAAATCCCCACAAATTTTTAAAAGCCAAATTTTACATCCCCTGCAATGTTACCATTTATTACCGGTTTCTTTCTGACCCAGTCAGATATAAGAGGCCTCTAACGGATCCAAGCCAGTTAATTATCAGATCAAATCCGTTCCTGGACTCAGTCCAGTTTCTGTTGCAACTTCCAAACCCAGTTTGGATCAGAAATTTGCTCAAAGAAATTCAGAGAGCTCAAAACACAAATCTGTGGAGCTCCAAAATTGAGATAACTTACTTATGATCCCTAGCTGCTCCAAGAGATCAATGTAGACAAGTGGGTCATGCAGGTACCTTGCTTGTTCACTCAGGACTCCTGGGTGTCGTGAGAAGCTCCACTTCAGACCCCACTTTTGACACCATCTGTTAAAAGAAAAACTTCAGCTGAATTAAATTTAAAGGAGTTTAACTGAGCAATGAATTATTTGCAAATTGGGCAGCCCCCAGAATCACAGAAGATTCAGAGACTCTTGGGTTGCCTTGTGGTCAGAATAAATTTATAGACGAAAAAGGGAAGTGATGTACAGAAATTGGGAGAGAAGTACAGAAACAACTGGATTGGTTACAGGTTGGCTTTTGCTTTATTTGAACACAGTTTGAACACTCAGCAGTCTATGAGTGGTTGAAGTATAGCTACTGGGATTTGCCAATGCTCAGCTATTGTTACAGGTGCATACTCCTAAATTAGGGTTTCAATCTTGTCTACCTATTAAGTTAGGTTATAGTTCGTCCACAAATACTCAAATATAGAAGTCTGGAGTCCTTCTCAGGCCACATAGTTTCCTTTAACAATATATACTATTACATAATACATAATATGTATAAAAAATATATAAAATGTATATTTTATATATAAATAAATATATTATATATAAATAAAAAATATATATAGGGTTTATTTTGTTCTCTCTTTTTGTTCTCTCTATAGAGAGAGAACAAAACAACACAAAAGATAGTGTGATATGGGCATGAGTACAGAAATATAAATCAATGAAATAGAATTGAGAGTCCCAAAATAAACCCATATATCTATCACCAACTGGTTTTTAATAAGAGTCCCAAAATTATTCATTAGGAATGAAAGAATATTTTCTTCAATAAATGGTATGGGAAAAGTTGAATAGCCACATGCAAAAAATGAATTTGAACCCCAACCTCACATCATATACAAAAATTAACTCAAAAAGGCTCATAGACTTAAATTTAAGAACTAAAACTATAAAACTCTTAGAAGAAAACATATGTGTAAATATTCTTGACTTTGGATTAGACAATAGGTTTTTGGAGATGACACCAAAAGTACAAGAGACAAAGAAAGAATAGATGAATTAAAATTCATCATACTAGAAACTTTTCAACCAGGCGTGATGGCTCACACCTGTAATCCCAACACTTTGGGGGGCCGAGGTAGGCAGATTACCTGATGTCAGGAGTTCAAGACCAGCCTGGTTAACATGGTGAAACCCCGTCTCTACTAAAAATAAAAAAAATTAGCCAGGCCTGGTGGCATGCACGTGTAATCCCAGCTACTTGGGAGAGTGAGGCAGGAGAATCACTTGAGCCCGGGAGGTGGAGGTTGTAGTGAGCTGAGATCATGCCACTGCACTCCAGCCTGGGCAACAGAGTGAGCCTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAAACTTTTGTGTTTTGAAGAATACCATCAAGCAAGTGAAAAAGCCAGGGGCTAAAGCCTGTAATCCCAGCACTTTGGGAGGCTGCGGTGGGAATACTACTTGATCCGAGGAGTTCAAGACCAGCCTGGGTAACGTAGGGAAACCCTCATCTCCACCAAAAAAAAAAAAAAAATTAGCCAGACATAGTGGCATGCATCTGTGTTCCCAGCTACTTAGGAGGCTGAGGTGGGAGGATTGCTTGAGACCAGGAAGTTGAAGCTGCTATGAGCTGTGATAACACCACTGCACTTCAGCCTGGGTGACAGAGTGAGACCTGTCTCAAGAAAGAAATAACAATGAATTATTAGAGAAAAGAAAGAGAAAAAAATAACTCCTGGAATGTGAGGAAGTATTTTCAAGTCATACATCAGTAAGAGGAGTTATATCCAGAATATTTGAAAAACGCTTACAACTCCATAATAAAAAGAGAAATAAGGTGAGTGTGGTGGCTTGGACCTGTAATCCCCACACTTTGGGAGGCCAAGACAGGCAGATCACTTGAGCTCGTGAGTTCAAGACCAGTCTGGACAACAAGGTGACTTTCCATCTCTATGAAAAATACAAAACTTGGCCAGGCATGGTAGTGTGTGCCTGTGGTCTCAGCTACTTGGGAGGCTGAGGTGGGAGGATACCTTGAGCCTGGGAGGTGGAGGTTGCAGTCACCAAGATGGCACCATAGCACTCCAGCCTGGTCAACAGAGCCAGACATTATCTAAAAAACAAAGAAAAATAAAAAAGACAAATAAGCCAATTTAAAAATGGTCAAAGGATTTGAACAGACATTTTTTCAAAGGAGATACACAAATTGTTGATGGGCTCATGAAAAGGTGCTCAATGTCACTCTGTGTCAATAGGGAAATATAAAGCAAAACCAGAAAGAGATACAATACCACTACACACCCACTAGAATAGCTATAAAGAAAAAGAATAATAGTAACAAGTATTGGTGAGGCTGTGGGTAATTGGAGCTCTTTTAAATTGTTATTAGGAATGTAAAATGGTGCAGTTATTCTGGAAAACAGCTGGACAATCCCTCAAAAAGTTAACCATAGAGTTACCATATGACACAGCAATTCCACTCCTAGGTATATACTCAAGGTATGTACCAAGAAAATTGAAAACACGCATCACACAAACAATTAAACATGAATGTTCATAGCATCATTATTTATAATCACCAAAAACTGCAAGTAACCCAAATGTCTATCAACAGATAAATGGCATATTCAGAAAATGGAACATTATTCGGCCATAAAAAGAAAAGAAGTTCGGATACATACTATTACATAGATGAACCTTGAATACATTATGCTAGCTAACTGAAAGAAGCTAGACACAAAAGATCACATATTATATGATCCTTTGTATATGAAATGTCCAGAAGGGCCAATTCATAAAGAGAAAAGGTAGATTAGTGGTAGCCAGGCTTTTAGTTAGGGAAAGTGGGGAGTAGCAGCTGATGTGGTTTCTTTTTAAGTTGATTGAAATGTTATGGATGACAATGCAGTGGCTCATGCCTGTAATCCCAGTATGTTGGGAAACCAAGGCAGGAGGATCACTTGAGGCCAGGAGTTTGAGACCAGCCTAGTCAACACAGCAAGATCCTGTCTCTACTCCATTCATATATATATGTTCATATATATGTTCGGGAATTATCACAAATTTATGTGATGGATGTGAACTCTGTGAATATACTAAAAGTCACTAAATTATACACTTCAAAGAGAGGTATGTGTGAATTTTATTTCAGTAACACTGTTACAAAAAAGGAAAAGTAAGCTCGAGTATCTATGTTAATATCCAACAAAACATATTTCAGATAAAACAATATGACTAGGGATAAAGAGGATCATTTCATGATAAAGATGCCAATTTATCAAAAGGGCATAATAATGTTAAATATTTATGTACCCGATAGCAGAGCATACATTAAGAAAATACTGATATAACTAAAATTAGACAAATCCACAATTATAGCTGAAGATTGTAATGCCTGTCTCTCAATGATTGATGTAACAAATAAACAGAAAATAGGTAAGGATGTAAAAGATGTAGCCTAAGCTATCAACCAATTTTACTTAATTGGCATTTCTAGAACACTTTATAGAACCACAAAATTGTTTAGTAAAAAATTTGGCCTTTCCCAAAGAGAGGTCTGGCCTTTGCTCTCAGCTTCTGGCAGGTAATCTGTGTCATACCAGATAGAAATGTCTTTGTTTAAAGCAGGGGCTGGCCACATCATATCTTGGGGTGGGGCTGGCCATAGCTAACAGTCTGAGAGTAGGGGCTTTGGCTGACCTGGTAGAAGCCAACCTGGAGACTGAATTCAACCATATGGGCAATCAATCATGTCTTTATGATGAGGCCCCAATAAAAACTCCGGACACCAAAGCTCAGGTGAGCATTCCTGGATGGTAATATTTCTTGTGTATTTTCACAAACCAATGATGAGTCCTGATTCCACAGAGAAAGGAAAACAGGAACTGCATGTTGGATACTTATCCTAGACTCTGTTTAACATGCTTGTATCATGCCTGATTTTAATCTGTACCTTTTCCCAATAATCACAGCTATAGCCATGAGTATATTTTTGGTGGGTTATCTGAGTTCTAGCAAGTTATCGAAACTTAGAGTGGTTTTGGGAACACCCTGAGCTTTCAGCTGGTGTCAGAGGTGAGGGCAGTCTTGAAGACTGTGACCTCTAACTTTATAGTTGACCCAAACCCTTGCAAGAATATTCTTTTTTATTTATTTACTTTGTAAAGGTAGGCTCCCAGTATGTTGCTCATGCTGGTCTTGAATACCTGGTCTCAAGTGACCCCCTTCCTCAGCCTCCCAAAGTGCTGGAATACAGGTGTGAGCCACTGTGTCCAGCCTTATTTTCTATTTTATTCATTTATTTTTGAAACTTCTTTTTTTTTTTTTTGAGACAATGTCTCGCTCCGTCACCCAGGTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACATTCATCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGCACCACTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTGGTCAGACTTGTCTTGAATTCCTGACCTCATGATCTGCCTGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAGCCTGAAAATTCTTTTTTAGCACACGTGGAACCGTATACCACAGACCATATTTTGGGACATAAAACAAGTCTTAATACATTTAAAATAAATCAAATTATATTAAGTGTGTTACTTTACTTCAGTGGAATTAAATTAGAAATCAAGATCAGAGTAAGGCAAAGAATCCTCCTAAACTCATGCATGACAGTCATGAAGTTCACCTTCCTCTGGAAGGGAAAGAAAGGTGGTGGGGTTTAGGGTATTGCAGTACTGGAAATATATGCATGTTAGAGTAGAAGGATTCCATAGGAGGTTGGTCTAGAAGCACAAAAATGTCGGGTGGCTTTTAGTTGAGTATAAGGCTTGAACAGCATGAGGGACCATGAGGTTAAGTGGAAATCCTAAGACTAAAGCATCAAAGGCTTCAGTTAACTTTGCAGCTGCTGTGACTACACACAAACAAAAAGGGTAGGCTTTTGCTACAGGGTCAAGTGAGAGGCCAAAATAAGCTACTGGACTATGATGTCCATTGAGCTTTTGATTTAGAAGCCTGCAAGATTCGTACTGATCTTTCATGTATACATAGAAAGGTTTATAGTAATTGGGAAATTCAAGGATAGGAATGTTTTGAAGGGAGTCCTTTAAGTTATAGAAAATAGTCTCAAGTGAACCCGTCCAGGGCAAGGGCTCAGGTATTTCTGCTGTTATCAGAACATTTAAAGGGACGCAAATTCTGAAAATTAGGAATGCAATGTCTACGGTTTTCTATGAGGCTGAGAAATCCTTGATGTTGTCT	TAATAGA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_306:HG2_PB_pbsv_1101:HG3_PB_pbsv_1100:HG2_Ill_tnscope_120:HG2_Ill_SpiralSDKrefine_1081:HG3_PB_assemblyticsfalcon_1627:HG3_PB_SVrefine2PBcRDovetail_624:HG3_PB_SVrefine2Falcon1Dovetail_676:HG2_PB_assemblyticsPBcR_1633:HG2_PB_SVrefine2PBcRplusDovetail_736:HG2_PB_SVrefine2PB10Xhap12_897:HG2_PB_SVrefine2Falcon2Bionano_290:HG2_10X_SVrefine210Xhap12_859:HG2_Ill_MetaSV_317:HG2_10X_allpass_169:HG2_Ill_Krunchall_1498:HG3_10X_allpass_210:HG4_PB_assemblyticsfalcon_1591:HG4_PB_SVrefine2Falcon1Dovetail_708;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_859:HG2_PB_SVrefine2Falcon2Bionano_290:HG2_PB_SVrefine2PB10Xhap12_897:HG2_PB_SVrefine2PBcRplusDovetail_736:HG2_PB_assemblyticsPBcR_1633:HG3_PB_SVrefine2Falcon1Dovetail_676:HG3_PB_SVrefine2PBcRDovetail_624:HG3_PB_assemblyticsfalcon_1627;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0109765;ClusterMaxSizeDiff=0.0109765;ClusterMaxEditDist=0.0109765;PBcalls=11;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-9604;DistBack=-1;DistForward=-9133;DistMin=-9133;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:203935832-203945442;PctSeqSimilarity=0.9997;PctSizeSimilarity=1;PctRecOverlap=0.9994;SizeDiff=0;StartDistance=-6;EndDistance=0;GTMatch=0;TruScore=99;MatchId=242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:47:0|1:48:0:4:28:0|1:53:0:0:29:0/1:73:20:0/1:433:237:9488:.:.
chr1	205439855	HG2_10X_SVrefine210Xhap12_866	TAAAATTTGAAAAATAATGCATGTTTAAATCTGTAAAATGGGCCAGGCACACTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAAGCAGATCACTTCAGGTCAGGAGTTCAAGACCAGAATGGCCAACATGGAGAATCCCCGCCTCTGCTAAAAATACAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_1507:HG2_PB_HySA_2145:HG2_PB_SVrefine2PB10Xhap12_903:HG2_PB_PB10Xdip_916:HG2_PB_assemblyticsPBcR_1648:HG2_PB_assemblyticsfalcon_1658:HG4_PB_SVrefine2PBcRDovetail_611:HG4_Ill_manta_266:HG4_Ill_SVrefine2DISCOVARDovetail_828:HG4_Ill_MetaSV_338:HG4_Ill_GATKHCSBGrefine_752:HG3_PB_assemblyticsfalcon_1639:HG3_PB_SVrefine2Falcon1Dovetail_682:HG2_PB_SVrefine2PBcRplusDovetail_741:HG2_PB_SVrefine2PB10Xhap12_902:HG2_PB_SVrefine2Falcon1plusDovetail_763:HG2_Ill_manta_309:HG2_Ill_breakscan11_129:HG2_Ill_SpiralSDKrefine_1090:HG2_Ill_MetaSV_319:HG2_Ill_GATKHCSBGrefine_715:HG2_10X_allpass_170:HG2_10X_SVrefine210Xhap12_866:HG4_PB_pbsv_1111:HG4_Ill_Krunchall_1564:HG2_PB_pbsv_1107;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_866:HG2_10X_allpass_170:HG2_Ill_GATKHCSBGrefine_715:HG2_Ill_MetaSV_319:HG2_Ill_SpiralSDKrefine_1090:HG2_Ill_breakscan11_129:HG2_Ill_manta_309:HG2_PB_SVrefine2Falcon1plusDovetail_763:HG2_PB_SVrefine2PB10Xhap12_902:HG2_PB_SVrefine2PBcRplusDovetail_741:HG3_PB_SVrefine2Falcon1Dovetail_682:HG3_PB_assemblyticsfalcon_1639:HG4_Ill_GATKHCSBGrefine_752:HG4_Ill_MetaSV_338:HG4_Ill_SVrefine2DISCOVARDovetail_828:HG4_Ill_manta_266:HG4_PB_SVrefine2PBcRDovetail_611;NumExactMatchSVs=17;ClusterMaxShiftDist=0.136095;ClusterMaxSizeDiff=0.136095;ClusterMaxEditDist=0.136095;PBcalls=13;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-169;DistBack=105820;DistForward=-167;DistMin=-167;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3623;REFWIDENED=1:205430001-205443647;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=243.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:35:./.:25:14:13:18:1|0:0:28:37:0:0/1:44:14:./.:.:.:.:.:.
chr1	207541963	HG4_PB_SVrefine2Falcon1Dovetail_712	ATCAACATTCACTTTTGAAAGGGCCATGGAGGAAAATGAACCAGGAAGATCCTCCCTGGGGCAGAGCTACCACTGGATGAAATGAACAATTCATTGAAAGACACAAATTACCAAAACTAACCCAATAAGCAATATAAAACTTGAATTGCCCTATTAATTCAAGAAATTGCATTTTTAATTAAAAATCTTTCCAAAAAGAAAAATTCATGCCTAAATGGCTTCACTTGTAAACTCTAGCATTTAAGGAAGAAATAAAACCAATTGTACACAAACTCTTTGAGAAAATAGAAAATACTTCCAAACTCATTTCATGAGGCCAAATATATTAAAAAACTACAGACAAATATCCCTCATGAATATAGACACAAATATACTTAACAAAATTTTAACAAAACAAATTAGTATATGTAAAAGAATACTTACTATACATCATGATGGAATGAGGTTTATCTGGGGAGTGAAAGGTTGGTTTGACATCCAAAAATTAATCAATGTAATTCACCATATTAGAATAAAGAAGAAAATATAATCATTTCAATAAATGCAGGAAAAGCTTTTTGTAAAGTTCAACACTAATTTGTGATTTCAAAAAATCTATCAGCAAACTAAGAATAAAAGAAACATTTCTCTTAATCTAATTAAGGGCATCTTCAAAAACCTACATCTTTCACTGTACTCAATATTGAAAGCCTCAATGCTTTCTACCTAAGATAAGGAACAAGGCAGGGATATCTATTCTGCCATTTCTGTTCAACATTATACTGGAAGTTTTAGCCAGTGCAGTAAGGCAAGAAAAAGAAATGACAGTCAATAAATTGGAAAGGGAGAAGAAAGTCGTTTTTATTGGTAGATGACATGACCAAGTATTAATACATAGAAAGCTTAAAGAGTCTACTAGAACTAATAAGTGAATTTATTGAGGTCAGAATACAATGTTAATGTATAAAAATTATAATTTTATGTATTAGCAATGAACAATTAGAAAATGAATTTCGAAAACAACTTCATTTCCAACAGCATCCAAAAACATGTTAGAGATAAATTTTACAAAACATGGAAGATAGTTTCTTTTCCTGTGCAGAAGCGCTTTAGTTTAATTAGATCCCATTTTTCATAAAAAAAGAATGAGATCATGTCCTTTGCAGGGACATGAATGAAGCTGGAAGCCAACATTCTCAGCAAACTAACACAGGAACGGAAAACCAAACACCACATGTTTTCACTCATAAGTGGGAGTTCAACAATGAGAACAGATGGACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGAGTGGGGGGCAAGGAGAAGGAGAGCATTAGGACAAATACCTAATACATGCGGGGCTTAAAACCTAGATGACAGGTTGATGGCTGCAGCAAACCACCATGGCACATATATGCCTATGTAACAAACCTGCATGTTCTGCACATGTATCCCAGAACTTAAAGTAACATTTTTTAAAAACGGAAGAATTCTATTTAAAAAAAAAAAACTATAAATTTTGCTGAGAGAAATTACAGACTTAAGTAAATGTTATTAACATCATTTTCGTGGGTTGGAACACTCAATATTGTTAAGATAGCAATTCTCCACACATCAATTTATAACTCCAATAGATATTTTTAAAAAGTGATTCCAAATTTATATTAAAATGAATTGCCTCTCTTAAACCTCCCTTATAATTTTTTTAAAAGATTTCAGAAGACTAAACACTATATTACACAGACTCCATTGAAGCTAGGAGTCTAGGAGAAAATTTGATCTACAACGTAACAAGCAGTTATGTGATATTTATTTGGAGGTCAGAATTAAGGTGTAGGTCAACTTCCTACTGCTGCTTCTATTTCCAGCAAGATAAGATCAGCCACAGGTGATTGTGGTGGTCTTTTTCTACTTTCATTTATCTAGTCATCAACTTTATGGGAATAAAAATCTGCGGTAGTGTGTCTGGAATTGCTGGGTTCTTGGTCTCGCTGACTTCAAGAATGAAGCCGCAGACCCTCACGGTGAGTGTTACAGTTCTTAAAGATGATGTGTCTGGAGTTTCTTCTTACTGGTGGGTTTGTGGTCTCGCTGACTTCAGGATTGAAGCTGCAGACCTTCACAGTGAGTGTTACAGCTCTTAAAGGCGGCGCGTCTGGAGTTGTTTGTTCCCTTCAGTGGGTTCGTGGTCTCGCTGGCCTCAGGAATGAAGCTGCAGACCTTCGTGGTGAGTGTTACAGCTCATAAGGGTGGTGCGGACCCAAAGGGTGAGCAGCAGCAAGATTTATTGTGAAGAGCAAAAGAACAAAGCTACCACACAGTGGAAAAGGACCCAACTGGGTTGCCGCTGCTGGCGGGGGCAGCCTGCTTTTATTCCCTTATCTGGCCCCACCCACATCCTGGCGATTGGTCCATTGTACAGAGAGATGATTGTTCCATTTTACAGAGAGCTGATTGGCCCATTTTACGGAGAGCTGATTGTTCTGTTTTGACAGGGTGCTGATTGGTGCGTTTAGAAACCTGGAGCTAGACAGAGTACTGATTGGTGCATTTACAATCCTTTAGCTAGACACAAAAGTTCTCCAAGTCCCCACTAGAATAGGTAGACACAGAGCACTGATTGGTGTCTTTACACACCTTGAGCTAGACACAGAACGCTGATTGGTGCATTTACAAACCTTTAGCTAGACATTAAAATTCTCCAAATCCCCACCTGACTCAGGAGACCAGCTGGCTTCTCCTAGTGGATCCTGCCCTGGGCAGAGCTGCCCGCCAGTCGCACGCTGCGGCGTGGGCACTCCTCAGCCCTTGGGCAGTCGATGGGACCAGGCGTGGCAGAGCAGGGGGCAGCACCCATCTGGGAGGCTCAGGCCACGCAGGAGCCCACCGGTAGGGGGGCTCAGGCATGGTGGGCTGCAGGTCCCGAGCCCTGCCCCGCAGGGAGGTGGCTGAGGCCTGGGAGAATTTGAGCGCGGCACGGGCGGGCCGGCAGTGCTGAGGGACCTGGCGCACCCTCCACAGCTGCTGGCCCGGGTGCTAAGCCCCTCACTGCCCGGGGCTGGCAGCACCAGCCGGCTGCTCTGAGTGTGGGGCCCGCTGTGCCTTACCCACCCAGAACTGGCGCTGGTCTGCGAGCGCGGCATGCAGCCCCGGTTCCTGCCTGCGCCTCTCCCTCCACACCTCCCGGCAAGCAGAGGGAGCCGGCTCCGGCCCGGCCAGCCCAGAGAGGGGCTCCCACAGTGCAGCGGCGGGCTGAAGGGCTCCTCAAGCATGGCCAGAGCGGACACGGAGGCCGAGGAGGCGCCGAGAGTGAACGAGGGCTGCTAGCACGTTGTCACCTCTCAGTAGGAGAGCGATTGTAGCAGCAGCAGATTCCTGAACTCCATGATTTCGATGGTGTGATCCTGAAGTCAGTTGTTCAGAGGCAGTTCTCTAACATTTCCAGCTTTCTTTCAAAGAAACTAAGAGGGATTTTTGTTTTCTTCACTGAAATTTGGCTAATCCAATATTCCACAACTCTTAACTATTTTTATTTCAGTTTCCTTCCCCTTAGCTAATCAATTAAGTTAATCCACTAAGTTCATCAGTGCCTTCCAGTCCACTGATTCTCTC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_875:HG4_PB_assemblyticsfalcon_1616:HG3_PB_assemblyticsfalcon_1655:HG2_PB_assemblyticsfalcon_1672:HG4_10X_allpass_184:HG3_10X_allpass_213:HG2_PB_assemblyticsPBcR_1668:HG2_10X_allpass_172:HG2_PB_pbsv_1117:HG3_PB_pbsv_1118:HG2_Ill_tnscope_122:HG4_PB_pbsv_1122:HG4_PB_SVrefine2PBcRDovetail_614:HG4_PB_SVrefine2Falcon1Dovetail_712:HG4_Ill_SVrefine2DISCOVARDovetail_832:HG4_Ill_MetaSV_339:HG3_PB_SVrefine2Falcon1Dovetail_686:HG3_Ill_MetaSV_311:HG2_PB_SVrefine2PBcRplusDovetail_747:HG2_PB_SVrefine2PB10Xhap12_910:HG2_PB_SVrefine2Falcon2Bionano_299:HG2_PB_SVrefine2Falcon1plusDovetail_768:HG2_Ill_SpiralSDKrefine_1101:HG2_Ill_SVrefine2DISCOVARplusDovetail_914:HG2_Ill_MetaSV_321:HG2_Ill_GATKHCSBGrefine_740;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_875:HG4_PB_pbsv_1122:HG4_PB_SVrefine2PBcRDovetail_614:HG4_PB_SVrefine2Falcon1Dovetail_712:HG4_Ill_SVrefine2DISCOVARDovetail_832:HG4_Ill_MetaSV_339:HG3_PB_SVrefine2Falcon1Dovetail_686:HG3_Ill_MetaSV_311:HG2_PB_SVrefine2PBcRplusDovetail_747:HG2_PB_SVrefine2PB10Xhap12_910:HG2_PB_SVrefine2Falcon2Bionano_299:HG2_PB_SVrefine2Falcon1plusDovetail_768:HG2_Ill_SpiralSDKrefine_1101:HG2_Ill_SVrefine2DISCOVARplusDovetail_914:HG2_Ill_MetaSV_321:HG2_Ill_GATKHCSBGrefine_740;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0400953;ClusterMaxSizeDiff=0.0400953;ClusterMaxEditDist=0.0400953;PBcalls=14;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3601;DistBack=47478;DistForward=18957;DistMin=18957;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=72;REFWIDENED=1:207541964-207545636;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:149:1/1:3:29:0:22:1/1:0:22:0:20:1/1:0:62:1/1:2:271:3671:.:.
chr1	207841062	HG2_PB_SVrefine2Falcon1plusDovetail_770	CAGAGTGAAGAAAAAAACCTACAGAATGTGAGAAAATGTTTGCAACCTATGCCTTTGACAAGGGGTTAATATCCAGAATATCTGAGGAACTCAAACAACTCAGCAAAATAAAACAAATAATATTATTTAAAAGTGGGCACAAGACCTGAACAGACATCACTCAAAAGAAGACATAGAAATGGCCAACGAATATAAAACAAAATGCTCAACATTCTTAGTCATCAGAGAAATACAAAATAAAACCAGAGAGAGATATCACCTCACCCTAGTTATCAGAGCTCTTATCAAAAAGATAAAAGATAACAAATGCTGCTGAGGATGTGGAAAATAGAGACCTCTTATACACTGTTAGGGAATCCAAATTAATATGGCCATTATGGGAAATAGTATGGAGGTTTCTCAAAAAATTAAAAGCAGAACTACCATATGATCCAGCAATCCCACTACTGGGTATATACCCAAAAGAAAGGAAACCAGTATGATGAAAAGATATCTGCACTCTCACATTCAATGATGCACTATTCACAATAGCCAAGGTATGGAATCAACCCAAGTGTTCACCAATGGACGAATGGATAAATAAAATGTGGTATATATACACAAGGGAATACTATTCAGCCATAAGAAAGAATGAAATCCTATCATTTGCAGCAACATGGATGAATCTAGGGGATATTATATTAAATGAAGTAAATCAGGCACAGAAAGACAAATCCTGTATGATATCAGTCATGTGCAATCTAAAAAAGCTCATCTCATAGAAGTAGAGAGTAGAATACTGGTTACCAGAGGTTGGGGTAGGGAGAGACAATGGGAGATGGAGAGAGATTGGTTAAAGGGCACAGGGTCACAGATACATAAGAATAAATTCATCCTTGAATACTTAACCCTCTGCCCTACATCTGTCACTCCTACATCCATATTCATTGCTAATCCTGGGGCTAACTCTTGATTGCTTTCTTCTCACTACTAACCTTAAGAAAGGAAGTAACCAAAATCCAATACATGAGCAACTGTTCATTCCATCTCCAATATCTTTGTTAATTGTCCACTTTATCCACCCAGTCAGGGCCACCATCAAACCTCACTTGGATGTCAGCAAAAGCTCCCTGGCTGGTCTCCCCTCTCCATTATTGCTTTAATCTAGTCTCCATACTATACACAGATTTACATTTTTTGAATATATATCTAATTGTCCTTCCCTTTTTAAAAATCTTACAATGGCATGACATCTCAATTCACGATAAGGAAATTGGTTCTTCACATTCCCTGTGCACTGTACACATCGCCTGCAATTGCCCTTCAACACAGAGAGCAGGCATTTCATTAGCTGACCTTCCCACACACATTCTTGCAAAGAGGAAAAGTCAAGCAGGGTGTTTGGAGGTGAGTTGCCATCATCCACCGCCTTTGTCTGGAAGGAAGCGCAGGGCCTCACACGCGGGATCCATCGGAAGCCCAAGCATTGTCAAGCTCTGCTGCTGCACCTGGGTCAGCAAGGTGGGCTCTGCCAGCGAAACTCGTTAGAAACAATGCAAATGGGGAGTAAACATGGCCTTGCCCATGAAGGGGAAGCTGGTCAAAAGCATTTTGTCCCGGAACCCCGCAGCCCTCCCCATGCTCTGGGCGCGGAGCACAAGGATTGGTCACTCCTCTTTGCACTGCGCTTTTCCTCTTATTTCAGTTTTCTTCGAGATCAAATCTGGTTTGTAGATGTGCTTCGGGAGGATGGGGGTCTCTTCTCCGAGAAGCCGGGAGCCTGTTGGGCAGCCGGCGCCCGGTCTCCCCTTCTGCTGCGGAGGATCCCTGCTGGCGGTCGTGGTGCTGCTCGCGCTGCCGGTGGCCTGGGGTGAAACGCTGGGGGGCGTGGGGAGGCGCCCGGGCTGACGAGGCACCCAGGGCCCCGCAGAGAACTCGCGTGCCGCGCTGGGCTGCGCTGCTCTGCGCGCCCGGGTCCAAAGGCAGCGCGATGGGTGGGCTGAGCGCGCTACCTGGCAGGGCGGCGGGTCTGGGATCCTTCTGCGCACTGGAGACCCTCGCTGCCTCTAGGTAAGCGTGGAGTTCCCACGTGCAGGGGCTTAAGTCGTGACGAGCGCAGTGGAAGGCGCAGATGCTGAGCGGGTGCCGCACGAAATTCCTTGCCTTTGTGTATTCACAGCCTCGGCTGGCTATAGCCGAGCGTGGCGTCGATCCTAGCGAAACGGGACTTGGGGATCCGACAAACCTGAGTTCTGGTCCTAGAAACTTAACTGTGAGGCAAGTTAGCACACCTAAGTCTGTTTGCTCTTCTGTAAAATGGGGACACTGGTATCTCTGCATTGTGGAGTTGCTGCCTCAGTGGCATAAAGCCTGTCGAGTATCTAACACAGGGCCTGTCCCCGAGTCCATTTCTATCCCCCAACCGTTACCTCTGCACTTTGCTCCCAGTGGTGTTTAGACAAGCAGTCCTAGGGATGTCCTGCATGGAACTGTCCTCGTCCCCTACCCCAAGCCACCACCGCCATCATCATGATGCACTTGATTGACAGCATACTTTAAGACAGATGCATGCCAGGCACTTGGGGATTAGAAGAGCAAGGGAAGCCCCAGAACATGCAATGTAACCGCTGCAGGTAGAAGGGACAGTAGATATGTTTACAATTTGCATTTTAGTGATGTGTTTAGTACAAAATAAAGCCTATTATAACTACTATGGAAATTTTGAGGCCACATCTCTTCCTTTTTTTAACTTCAAGTAGGTAAACATCTTCAGTTAGAACCCTTCTATTATTAGTTTTGGGCTCCCCAGAAGTCTTCTTGGTTGCCTAGACTCACTGGCAACATCTCACTTGAAGTGACAGTTTTGGTTGTTTTGGTCCTGTCTCTTCCTGACAACTCAGGGTTCGTCCTTCTCTGCCACTAGACGTTTTGCATTCATTATTTGAGTGTTCCTTCTTCTCTAAAAGAGTAAGGGGAAAAGAAAACCAAGTTCCCCCAAGAGTTGTTATTAATATTTGATCTCCTTAGGCACCAGAAAGTAACCTGTCTAGTGAAGAGATATGATAAAACTTACAATTTTATTTTTAGGAGAGAAGCATGCCCAGTAAGTTAAGCAATCTGTTGTCAGTGCTTACTGAGGTTCTCACAATAACCTCCAAATGTGAAACAGCCTAAACTAAACTACCTAGAAATTTTGTTGCTGGAGTAATTTCAATTTTAAAATGCTTATGGATGCTTCCGGTGTGCACAGTCCTTTGGAATTTAAAAGAAATGTAAGAGAAAGAGCTATGCTCCCAAGGTGTATGCATATAGAAGTAGGTGGTGGAGTTTTATGAAATCTACTTTTTAGGAAGCCAGTGTTCTGGTTTTTCCAGACTCTGCTACTTACCAACTGGGGCTGTGGACCCAGCAACTTAAGTCACATCACTGACCTTCAGTGTCCACGTGTATAAAATGAGCATGACTGACATCCTGATTTCTGAGAGAGGTATTTTGAAAATCAGGTGGGGTAGTGCATGTGACAGCGTTTTGTAATCTGAAAACCCTCATGCATGTCTGAAAAACCATGACTAAGCAGTCGTGCAAGACTGCAGGATCACTGAAAAGGGAGAAATCTCAACTCCTATGATCAGGAAAGGGTGAGGGAAAAGAGTATGACTTTACTAGCACTTGAAGAGTGAATCCAGAAACAGGTTGCATAGGACAGTTTATGGGAATATTTATATATAAAAAATAACAGAGGAACTAGGATTGTTTTGTCATTAGAGGGTACTCCTACTACCCATGAAGTGGTATGGTGCTATTTGAAAGAGAACTTAGATTAGCTGCAAATAGATATTGCAAACTTAGGGCAACTACTGAAAAAAGTGAAAAAAAGAAGTACAATTGATATGCCAGTAAGGAAGAGTGAATTGCATCATATAAAATGCTCAGTTAAAACAATAAACGGGGCCAGGCGCAGTGGCTCACACCTATAATCCCAGCACTTTAGGAGGCAGGGTAGATAACTTGAGGTCAGGACTTTGAGACCAGCCTGGCCAACATGGTGAATACCCATTTCTACAAAAATCCAAAAATTAGCTGGGCATGATGGTGGGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCTCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATCATGCCACTACACTCCAGCCTGGGCGAAAGAGTGAGACTCTGTCTCAAAAATAAAAATAAAATAAAATAAAGGTCAGGAAAAGAATGCAAGACAAAAAATAGAAACAGAGAACAAGAGAAGAAAGACAACAAATAGAAACAAGTAACATATTAAACCAACTATATCAACCATCATTTTGAGTGTCAATGATCTAAAGGCACCAATTGAAACAGATCATCAGAGTCGATCAACAAACAAAACTCAACTATATATTGTGTACTCCCTATAAGACCATTTTAAATATAGACAATATATATTAAAAGTAAATGGGTAAAGATATACCATGCTAATGCTAGTCACAGAAAGCAGGAGTAGCTGTGTTAATTTCAAACACAGCAGACTTCAGACGAAGGAAAATTATTAGGAATAAAGAGGGTCATCATATAATGATAAAGGGGCTAATTCTCCAAGAAGGCATAACAATATCTAATATGTATCCATCTGACAGAGAAACAAAATATGTGGGGCAAAGCTGATAGAACTGCAAGGAGAAATAGATGAATGCACTATCATAGTTGGAGACTTCAGCACCTTTATCTTTTCTGATATCAGAAA	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_323:HG4_10X_allpass_185:HG4_Ill_Krunchall_1588:HG2_Ill_Krunchall_1534:HG2_10X_allpass_173:HG2_Ill_tnscope_123:HG4_PB_pbsv_1123:HG4_Ill_SVrefine2DISCOVARDovetail_837:HG4_Ill_MetaSV_341:HG2_PB_pbsv_1120:HG2_PB_SVrefine2PBcRplusDovetail_749:HG2_PB_SVrefine2PB10Xhap12_912:HG2_PB_SVrefine2Falcon1plusDovetail_770:HG2_Ill_breakscan11_130:HG2_Ill_SpiralSDKrefine_1105;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_MetaSV_323:HG4_PB_pbsv_1123:HG4_Ill_SVrefine2DISCOVARDovetail_837:HG4_Ill_MetaSV_341:HG2_PB_pbsv_1120:HG2_PB_SVrefine2PBcRplusDovetail_749:HG2_PB_SVrefine2PB10Xhap12_912:HG2_PB_SVrefine2Falcon1plusDovetail_770:HG2_Ill_breakscan11_130:HG2_Ill_SpiralSDKrefine_1105;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00168421;ClusterMaxSizeDiff=0.00168421;ClusterMaxEditDist=0.00168421;PBcalls=5;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-4752;DistBack=19314;DistForward=-4752;DistMin=-4752;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:207841063-207845817;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:60:43:0|1:51:1:1:18:1|0:0:31:81:0:0/1:70:14:0/1:367:167:4626:.:.
chr1	208867407	HG2_10X_SVrefine210Xhap12_878	AACACAGTGAAACCCCATCTCTACTAAAAATACAAAAAAATTAGCTGGGCATGGTGGTGGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCGTGAGGTGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_878:HG2_PB_pbsv_1122:HG4_PB_pbsv_1126:HG4_Ill_MetaSV_342:HG4_PB_SVrefine2PBcRDovetail_616:HG2_PB_SVrefine2PBcRplusDovetail_751:HG2_PB_SVrefine2PB10Xhap12_915:HG2_PB_SVrefine2Falcon2Bionano_302;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_878:HG4_PB_SVrefine2PBcRDovetail_616:HG2_PB_SVrefine2PBcRplusDovetail_751:HG2_PB_SVrefine2PB10Xhap12_915:HG2_PB_SVrefine2Falcon2Bionano_302;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0238095;ClusterMaxSizeDiff=0.0238095;ClusterMaxEditDist=0.03003;PBcalls=6;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-168;DistBack=5256;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=356;REFWIDENED=1:208867408-208867931;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0.6627;SizeDiff=0;StartDistance=-57;EndDistance=-57;GTMatch=0;TruScore=88;MatchId=246.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:21:./.:18:3:5:14:0/0:5:0:8:0:0/0:18:0:./.:.:.:.:.:.
chr1	210639193	HG2_PB_SVrefine2PBcRplusDovetail_753	TATTGCAAGGAATTGCAAGGAATGAATTGCAAGGAATTGCAAGGAATGAATTGCAAGGAATTGCAAGGAATGAATTGCAAGGAATTGCAAGGAATGAATTGCAAGGAATTGCAAGGAATGA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_1131:HG2_PB_pbsv_1126:HG4_PB_SVrefine2PBcRDovetail_618:HG4_PB_SVrefine2Falcon1Dovetail_718:HG2_PB_SVrefine2PBcRplusDovetail_753:HG2_PB_SVrefine2PB10Xhap12_916:HG2_Ill_SVrefine2DISCOVARplusDovetail_926;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_926:HG2_PB_SVrefine2PB10Xhap12_916:HG2_PB_SVrefine2PBcRplusDovetail_753:HG4_PB_SVrefine2Falcon1Dovetail_718:HG4_PB_SVrefine2PBcRDovetail_618;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0248963;ClusterMaxSizeDiff=0.00829876;ClusterMaxEditDist=0.0746888;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-120;DistBack=-97;DistForward=-120;DistMin=-120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=242;REFWIDENED=1:210639194-210639555;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:38:./.:10:18:8:15:./.:0:1:0:0:0/1:19:18:./.:.:.:.:.:.
chr1	210706592	HG3_Ill_GATKHCSBGrefine_764	TGGCTCGTTTGTTGGTAGCTCTGCTGTTTTAGAAGTACAGATGGCAGCTGGCTGCTTCAGAAGACAGCATCTTTGGGGACTGTCAACTCCAAGGGAAATGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_884:HG3_PB_pbsv_1128:HG2_PB_SVrefine2Falcon2Bionano_303:HG3_PB_HySA_1734:HG2_PB_pbsv_1127:HG4_PB_pbsv_1132:HG4_PB_HySA_1707:HG3_Ill_MetaSV_315:HG4_PB_SVrefine2Falcon1Dovetail_719:HG4_Ill_SVrefine2DISCOVARDovetail_850:HG4_Ill_GATKHCSBGrefine_763:HG4_Ill_250bpfermikitraw_1510:HG4_Ill_150bpfermikitraw_1469:HG3_PB_SVrefine2PBcRDovetail_635:HG3_PB_SVrefine2Falcon1Dovetail_693:HG3_Ill_SVrefine2DISCOVARDovetail_793:HG3_Ill_Krunchall_1573:HG3_Ill_GATKHCSBGrefine_764:HG3_Ill_250bpfermikitraw_1516:HG3_Ill_150bpfermikitraw_1441:HG2_PB_SVrefine2PBcRplusDovetail_754:HG2_PB_SVrefine2PB10Xhap12_917:HG2_PB_SVrefine2Falcon1plusDovetail_774:HG2_Ill_manta_314:HG2_Ill_SVrefine2DISCOVARplusDovetail_928:HG2_Ill_Krunchall_1547:HG2_Ill_GATKHCSBGrefine_744:HG2_Ill_250bpfermikitraw_1532:HG2_Ill_150bpfermikitraw_1411;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_884:HG4_PB_SVrefine2Falcon1Dovetail_719:HG4_Ill_SVrefine2DISCOVARDovetail_850:HG4_Ill_GATKHCSBGrefine_763:HG4_Ill_250bpfermikitraw_1510:HG4_Ill_150bpfermikitraw_1469:HG3_PB_SVrefine2PBcRDovetail_635:HG3_PB_SVrefine2Falcon1Dovetail_693:HG3_Ill_SVrefine2DISCOVARDovetail_793:HG3_Ill_Krunchall_1573:HG3_Ill_GATKHCSBGrefine_764:HG3_Ill_250bpfermikitraw_1516:HG3_Ill_150bpfermikitraw_1441:HG2_PB_SVrefine2PBcRplusDovetail_754:HG2_PB_SVrefine2PB10Xhap12_917:HG2_PB_SVrefine2Falcon1plusDovetail_774:HG2_Ill_manta_314:HG2_Ill_SVrefine2DISCOVARplusDovetail_928:HG2_Ill_Krunchall_1547:HG2_Ill_GATKHCSBGrefine_744:HG2_Ill_250bpfermikitraw_1532:HG2_Ill_150bpfermikitraw_1411;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.040404;PBcalls=12;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-100;DistBack=38705;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=101;REFWIDENED=1:210706593-210706793;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:32:1:19:./.:0:3:0:4:1/1:0:32:./.:.:.:.:.:.
chr1	212471135	HG4_Ill_GATKHCSBGrefine_772	CAAGATGAAGTGAATTGTTTTTTTTTTTTTTTCTTTTTTATTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGCGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTCAACGAGCATGCTGCCCTCAAGCATCTGTTCAACAAAGCACATCTTGCACCGCCCTTAATCCATCTAACCCTGAGTGGACACAGCACATGTCTCAGAGAGCACAGGGTTGGGGATAAGGTCCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCAGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCGCTTCCCAGTAGGGGCGGCCCGGCAGAAGTGCCCCTCACCTCCCAGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCGCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGTTCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGTGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGTTGACCCCCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGCCGGGGCGGCTGGCCGACACCCCCCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCTGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGTTGCCAGACGGAGGGGCTCCTCACT	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_131:HG2_10X_SVrefine210Xhap12_888:HG4_10X_allpass_191:HG3_PB_assemblyticsfalcon_1687:HG2_PB_assemblyticsfalcon_1708:HG2_PB_assemblyticsPBcR_1704:HG4_Ill_Krunchall_1625:HG3_Ill_Krunchall_1593:HG2_Ill_Krunchall_1557:HG2_PB_HySA_2214:HG4_Ill_MetaSV_346:HG2_Ill_MetaSV_327:HG2_Ill_tnscope_126:HG4_PB_pbsv_1144:HG4_PB_assemblyticsfalcon_1650:HG4_PB_SVrefine2PBcRDovetail_625:HG4_PB_SVrefine2Falcon1Dovetail_728:HG4_Ill_SVrefine2DISCOVARDovetail_859:HG4_Ill_GATKHCSBGrefine_772:HG3_PB_pbsv_1138:HG3_PB_SVrefine2PBcRDovetail_639:HG3_PB_SVrefine2Falcon1Dovetail_702:HG3_Ill_SVrefine2DISCOVARDovetail_807:HG3_Ill_MetaSV_316:HG3_Ill_GATKHCSBGrefine_771:HG3_10X_allpass_217:HG2_PB_pbsv_1135:HG2_PB_SVrefine2PBcRplusDovetail_761:HG2_PB_SVrefine2PB10Xhap12_925:HG2_PB_SVrefine2Falcon2Bionano_310:HG2_PB_SVrefine2Falcon1plusDovetail_782:HG2_Ill_SVrefine2DISCOVARplusDovetail_935:HG2_Ill_GATKHCSBGrefine_749:HG2_10X_allpass_174;NumClusterSVs=34;ExactMatchIDs=HG2_10X_allpass_174:HG2_Ill_GATKHCSBGrefine_749:HG2_Ill_SVrefine2DISCOVARplusDovetail_935:HG2_PB_SVrefine2Falcon1plusDovetail_782:HG2_PB_SVrefine2Falcon2Bionano_310:HG2_PB_SVrefine2PB10Xhap12_925:HG2_PB_SVrefine2PBcRplusDovetail_761:HG2_PB_pbsv_1135:HG3_10X_allpass_217:HG3_Ill_GATKHCSBGrefine_771:HG3_Ill_MetaSV_316:HG3_Ill_SVrefine2DISCOVARDovetail_807:HG3_PB_SVrefine2Falcon1Dovetail_702:HG3_PB_SVrefine2PBcRDovetail_639:HG3_PB_pbsv_1138:HG4_Ill_GATKHCSBGrefine_772:HG4_Ill_SVrefine2DISCOVARDovetail_859:HG4_PB_SVrefine2Falcon1Dovetail_728:HG4_PB_SVrefine2PBcRDovetail_625:HG4_PB_assemblyticsfalcon_1650:HG4_PB_pbsv_1144;NumExactMatchSVs=21;ClusterMaxShiftDist=0.310674;ClusterMaxSizeDiff=0.310674;ClusterMaxEditDist=0.310674;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1481;DistBack=653;DistForward=17312;DistMin=653;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=1:212471136-212472634;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=249.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:./.:0:0:0:0:./.:0:12:0:0:1/1:0:53:1/1:3:97:1489:.:.
chr1	213084227	HG2_10X_SVrefine210Xhap12_889	GACCCCAATACAAACTCGACAGTAGTTCCAAATAGCCAGAAAATGGCACTTTGAATTTTTCCATCCTGCAAGATCTAAATAATTCTTGTCGTAAAATAGTCAAACGGTCTGAGGTGCCTGACGTCCAGGCATTCTTTTACACATCAGTCCCGTCCTAGCCTCTGTGCCCAGTGCAACTCGTCCCAAATCTTCCTTCTTTCCCTCCCGCCTGTCCCCTCAGTACCAACCCCAAGCATCGCTGAGTCTTTCTAATCTTCCTTTTCTACAGGCCCATCTGACCTCTTCCTTCCTCCCCAGGCTGCTCCTCGCCAGGCCGAGCTAGGTCCCATTTCTTCCTCAGCCTCCGCTCCTCCACCCTACAATCTTTTTATCGCCTCCCCTCATCACACCTGGTCCGGCTTACAGTTTCGTTCCGTGACTAGCCCTCCCCCACCTGCCCAGCAATTTACTCTTAAAAAGGTGGCTGGAGCCAAAGGCATAGTCAAGGTTAATGCTCCTTTTTCTTTATCCCAAATCAGATAGCGTTTAGGCTGTTTTTCATCAAATATAAAAATCCAGCCCAGTTCATGGCTCGTTTGGCAGCAACCCTGAGACACTTTACAGCCCTAGACCCTAAAAGGTCAAAAGGCCGTCTTATTCTCAATATACATTTTATTACCCAATCTGCTCCCGACATTAAATAAAACTCCAAAAATTAAATTCCGTCCCTCAAACCCCACAACAGGATTTAATTAACCTCGCCTTCAAGGTGTACCATAATAGAAAAAAGTTGCAATTCCTTGCCTCCACTGTGAGACAAACCCCAGCCACATCTCCAGCACACAAGAACTTCCAAACGCCTGAACCGCAGCAGCCAGGCCTTCCTCCAGAACCTCCTCCCACAGGAGCTTGCTACACGTGCTGGAAATCTGGCCACTGGGCCAAGGAATGCCCACTGCCCGGGATTCCTCCTAAGCCGCGTCCCATCTGTGTGGGACCCCACTGAAAATCGGACTGTTCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCTGGCCCAAGGCTCTCTGACTGACTCCTTCCCAGATCTTCTCGGCTTAGTGGCTGAAGACTGACACTGCCCGATCGCCTCGGAAGCCCCCTAGACCATCACGGACATCGAGCTTCGGGTAACTCACAGTGGAAGGTAAGCCCGTCCACTTCTTAATCAATACGGAGGCTACTCCACATTACCCTCTTTTCAAGGGCCTGTTTCCCTTGCCTCCATAACTGTTGTGGGTATTGACGGCCAGGCTTACTAAACCTCTTAAAACTCCCCAACTCTGGTGCCAACTTAGACAATACTCTTTTAAGCACTCCTTTTTAGTTATCCCCACCTGCCCAGTTCCCTTATTAGGCTGAGACACTTTAACTAAATTATCTGCTTCCCTGACTATTCCTAGACTACAGCTATATCTCATTGCCGCCCTTCTTCCCAATCCAAAGCCTCCTTTGCGTCCTCCTCTTCTATCCCCCCACCTTAACCCACAAGTATAAGATACCTCTACTCCCTCCTTGGCAACCGATCATGCACCCCTTACCATCTCATTAAAACCTAATCACTCTTACCCCACTCAACGCCAATATCCCATCCGGCAGCACGCTTTAAAAAGATTAACGCCTATTATCACTCGCCTGCTACAGCATGGCCTTTTAAAGCCTATAAACTCTCCTTACAATTCCCCCATTTTACCTGTCCTAAAACCAGACAAGCCTTACAAGTTAGTTCAGGATCTGCACCTTATCAACCAAATTGTTTTGCCTATACACCCCGTGGTGCCAAACCCATATACTCTCCTATCCTCAATACCTGCCTCTACAACCCATTATTCTGTTCTAGATCTCAAACATGCCTTCTTTACTATTCCTTTGCACCCTTAATCCCAGCCTCTCTTCACTTTCACTTGGACTGACCCTGAC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_1150:HG4_PB_SVrefine2Falcon1Dovetail_731:HG3_10X_allpass_219:HG4_PB_HySA_1736:HG3_PB_HySA_1761:HG2_PB_HySA_2225:HG3_PB_assemblyticsfalcon_1701:HG2_PB_assemblyticsfalcon_1719:HG2_PB_assemblyticsPBcR_1716:HG2_Ill_Krunchall_1569:HG4_PB_HySA_1735:HG3_PB_HySA_1760:HG2_Ill_MetaSV_328:HG4_Ill_MetaSV_347:HG3_PB_HySA_1759:HG2_Ill_tnscope_127:HG4_PB_SVrefine2PBcRDovetail_627:HG3_PB_SVrefine2PBcRDovetail_641:HG3_PB_SVrefine2Falcon1Dovetail_705:HG3_Ill_SVrefine2DISCOVARDovetail_809:HG3_Ill_MetaSV_317:HG2_PB_SVrefine2PBcRplusDovetail_763:HG2_PB_SVrefine2PB10Xhap12_927:HG2_PB_SVrefine2Falcon2Bionano_312:HG2_PB_SVrefine2Falcon1plusDovetail_784:HG2_Ill_SVrefine2DISCOVARplusDovetail_936:HG2_10X_allpass_176:HG2_10X_SVrefine210Xhap12_889:HG2_PB_pbsv_1140:HG2_Ill_GATKHCSBGrefine_753:HG3_PB_pbsv_1143;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_889:HG2_10X_allpass_176:HG2_Ill_SVrefine2DISCOVARplusDovetail_936:HG2_PB_SVrefine2Falcon1plusDovetail_784:HG2_PB_SVrefine2Falcon2Bionano_312:HG2_PB_SVrefine2PB10Xhap12_927:HG2_PB_SVrefine2PBcRplusDovetail_763:HG3_Ill_MetaSV_317:HG3_Ill_SVrefine2DISCOVARDovetail_809:HG3_PB_SVrefine2Falcon1Dovetail_705:HG3_PB_SVrefine2PBcRDovetail_641:HG4_PB_SVrefine2PBcRDovetail_627;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0391161;ClusterMaxSizeDiff=0.0391161;ClusterMaxEditDist=0.0462531;PBcalls=20;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1942;DistBack=625;DistForward=-1940;DistMin=-1940;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=1:213084228-213086173;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:12:0:17:./.:0:8:0:0:1/1:1:14:1/1:2:132:1907:.:.
chr1	214770104	HG4_PB_SVrefine2Falcon1Dovetail_732	TTCAAGTAATTCTCATGCCTCAGCCTCCTTAGTAGCTGGGATTACAGGTGCCTGCCACCACACCTGGATAATTTTTGTATTTTTAGTTCAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAGCTCCTGATCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACTGTGCCCAGCTTCAGAAACTAGATTCTGCACTTTTAGCCTCCAGAACTGTGAGAAAAGACATTTCTTTTGTTTATACAACAACCCTATCCATTAATACAAGAGAGTTTAGCAAGCTTAAAAGATACAAGGTCATTTTACAAAA	AG	20	PASS	ClusterIDs=HG4_PB_HySA_1752:HG4_Ill_GATKHCSBGrefine_779:HG3_Ill_GATKHCSBGrefine_777:HG2_Ill_GATKHCSBGrefine_756:HG2_Ill_tnscope_128:HG2_Ill_SpiralSDKrefine_1134:HG4_PB_SVrefine2PBcRDovetail_630:HG4_PB_SVrefine2Falcon1Dovetail_732:HG4_Ill_manta_277:HG4_Ill_SVrefine2DISCOVARDovetail_866:HG3_PB_SVrefine2PBcRDovetail_642:HG3_PB_SVrefine2Falcon1Dovetail_708:HG2_PB_SVrefine2PBcRplusDovetail_765:HG2_PB_SVrefine2PB10Xhap12_929:HG2_PB_SVrefine2Falcon2Bionano_314:HG2_PB_SVrefine2Falcon1plusDovetail_787:HG2_Ill_manta_318:HG2_Ill_SVrefine2DISCOVARplusDovetail_940:HG2_10X_SVrefine210Xhap12_892:HG4_Ill_MetaSV_348:HG3_Ill_MetaSV_319:HG2_Ill_MetaSV_329:HG4_Ill_Spiral_86:HG3_Ill_Spiral_1246:HG2_Ill_Spiral_62:HG2_PB_HySA_2247:HG4_Ill_scalpel_1078:HG4_10X_allpass_194:HG3_10X_allpass_220:HG2_PB_pbsv_1142:HG2_Ill_scalpel_1114:HG2_10X_allpass_177:HG4_PB_assemblyticsfalcon_1674:HG3_PB_assemblyticsfalcon_1714:HG2_PB_assemblyticsfalcon_1733:HG2_PB_assemblyticsPBcR_1738:HG3_PB_HySA_1781:HG4_Ill_Krunchall_1651:HG3_Ill_Krunchall_1615:HG3_PB_pbsv_1147:HG4_PB_pbsv_1155;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_892:HG2_Ill_SVrefine2DISCOVARplusDovetail_940:HG2_Ill_manta_318:HG2_PB_SVrefine2Falcon1plusDovetail_787:HG2_PB_SVrefine2Falcon2Bionano_314:HG2_PB_SVrefine2PB10Xhap12_929:HG2_PB_SVrefine2PBcRplusDovetail_765:HG3_PB_SVrefine2Falcon1Dovetail_708:HG3_PB_SVrefine2PBcRDovetail_642:HG4_Ill_SVrefine2DISCOVARDovetail_866:HG4_Ill_manta_277:HG4_PB_SVrefine2Falcon1Dovetail_732:HG4_PB_SVrefine2PBcRDovetail_630;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0558003;ClusterMaxSizeDiff=0.0558003;ClusterMaxEditDist=0.0558003;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-334;DistBack=17004;DistForward=2419;DistMin=2419;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:214770104-214770439;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.997;PctRecOverlap=0.997;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:./.:0:0:0:0:./.:0:0:0:9:1/1:0:49:0/1:2:16:.:.:.
chr1	215194727	HG4_Ill_GATKHC_1858	GGAGAGGTTGGCATCTGAATCGGTGGGCTGAGTAAGGAAGATCTGCCCTTACCC	G	20	PASS	ClusterIDs=HG2_PB_HySA_2250:HG4_Ill_Cortex_251:HG3_Ill_Cortex_270:HG2_Ill_Cortex_540:HG3_PB_HySA_1786:HG4_Ill_svaba_1422:HG4_Ill_manta_278:HG4_Ill_Krunchall_1657:HG4_Ill_GATKHC_1858:HG4_Ill_GATKHCSBGrefine_783:HG4_Ill_150bpfermikitraw_1508:HG4_CG_vcfBeta_790:HG4_10X_allpass_195:HG3_Ill_svaba_1459:HG3_Ill_scalpel_1204:HG3_Ill_manta_242:HG3_Ill_GATKHC_1924:HG3_Ill_GATKHCSBGrefine_781:HG3_Ill_250bpfermikitraw_1555:HG3_Ill_150bpfermikitraw_1484:HG3_CG_vcfBeta_688:HG3_10X_allpass_221:HG2_Ill_svaba_1420:HG2_Ill_manta_319:HG2_Ill_SpiralSDKrefine_1136:HG2_Ill_Krunchall_1582:HG2_Ill_GATKHC_1881:HG2_Ill_GATKHCSBGrefine_757:HG2_Ill_150bpfermikitraw_1439:HG2_CG_vcfBeta_703:HG2_10X_allpass_178:HG3_Ill_Krunchall_1620:HG4_PB_pbsv_1159:HG2_PB_pbsv_1146:HG3_PB_pbsv_1149;NumClusterSVs=35;ExactMatchIDs=HG2_10X_allpass_178:HG2_CG_vcfBeta_703:HG2_Ill_150bpfermikitraw_1439:HG2_Ill_GATKHCSBGrefine_757:HG2_Ill_GATKHC_1881:HG2_Ill_Krunchall_1582:HG2_Ill_SpiralSDKrefine_1136:HG2_Ill_manta_319:HG2_Ill_svaba_1420:HG3_10X_allpass_221:HG3_CG_vcfBeta_688:HG3_Ill_150bpfermikitraw_1484:HG3_Ill_250bpfermikitraw_1555:HG3_Ill_GATKHCSBGrefine_781:HG3_Ill_GATKHC_1924:HG3_Ill_manta_242:HG3_Ill_scalpel_1204:HG3_Ill_svaba_1459:HG4_10X_allpass_195:HG4_CG_vcfBeta_790:HG4_Ill_150bpfermikitraw_1508:HG4_Ill_GATKHCSBGrefine_783:HG4_Ill_GATKHC_1858:HG4_Ill_Krunchall_1657:HG4_Ill_manta_278:HG4_Ill_svaba_1422;NumExactMatchSVs=26;ClusterMaxShiftDist=0.156522;ClusterMaxSizeDiff=0.156522;ClusterMaxEditDist=0.156522;PBcalls=5;Illcalls=24;TenXcalls=3;CGcalls=3;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=3;HG2count=12;HG3count=13;HG4count=10;NumTechs=4;NumTechsExact=3;SVLEN=-53;DistBack=-32;DistForward=-28;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:215194726-215194781;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:0|1:19:5:4:32:1|0:0:13:19:0:0/1:16:16:./.:.:.:.:.:.
chr1	215267107	HG2_Ill_svaba_1421	AATATAAAATATATTATATATTATATATTATATAATATAAAATATATTATATATTATATATTAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_1150:HG4_Ill_GATKHC_1860:HG4_Ill_GATKHCSBGrefine_785:HG3_Ill_GATKHC_1926:HG3_Ill_GATKHCSBGrefine_782:HG2_Ill_GATKHC_1883:HG2_Ill_GATKHCSBGrefine_758:HG2_PB_PB10Xdip_946:HG2_PB_assemblyticsPBcR_1743:HG4_PB_assemblyticsfalcon_1683:HG4_Ill_svaba_1423:HG4_Ill_Krunchall_1658:HG4_Ill_250bpfermikitraw_1550:HG4_Ill_150bpfermikitraw_1509:HG3_Ill_svaba_1460:HG3_Ill_scalpel_1205:HG3_Ill_250bpfermikitraw_1557:HG3_Ill_150bpfermikitraw_1486:HG2_Ill_svaba_1421:HG2_Ill_scalpel_1116:HG2_Ill_SpiralSDKrefine_1137:HG2_Ill_Krunchall_1584:HG2_Ill_250bpfermikitraw_1567:HG2_Ill_150bpfermikitraw_1441:HG3_PB_assemblyticsfalcon_1721:HG2_PB_assemblyticsfalcon_1739:HG2_PB_pbsv_1147:HG4_PB_pbsv_1160;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1441:HG2_Ill_250bpfermikitraw_1567:HG2_Ill_Krunchall_1584:HG2_Ill_SpiralSDKrefine_1137:HG2_Ill_scalpel_1116:HG2_Ill_svaba_1421:HG3_Ill_150bpfermikitraw_1486:HG3_Ill_250bpfermikitraw_1557:HG3_Ill_scalpel_1205:HG3_Ill_svaba_1460:HG4_Ill_150bpfermikitraw_1509:HG4_Ill_250bpfermikitraw_1550:HG4_Ill_Krunchall_1658:HG4_Ill_svaba_1423;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.162602;PBcalls=8;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-63;DistBack=29457;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=33;REFWIDENED=1:215267106-215267204;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:53:1/1:1:17:6:20:./.:0:4:0:1:1/1:0:20:./.:.:.:.:.:.
chr1	216185304	HG2_PB_SVrefine2Falcon2Bionano_318	TCACGCTTGATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCC	T	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_761:HG4_PB_assemblyticsfalcon_1689:HG2_PB_assemblyticsPBcR_1750:HG2_PB_pbsv_1151:HG2_PB_HySA_2261:HG4_PB_HySA_1764:HG3_PB_HySA_1792:HG4_PB_pbsv_1163:HG4_PB_SVrefine2PBcRDovetail_634:HG4_PB_SVrefine2Falcon1Dovetail_736:HG4_Ill_svaba_1430:HG4_Ill_scalpel_1085:HG4_Ill_MetaSV_349:HG4_Ill_GATKHC_1867:HG4_Ill_GATKHCSBGrefine_790:HG3_PB_pbsv_1154:HG3_PB_assemblyticsfalcon_1727:HG3_PB_SVrefine2Falcon1Dovetail_712:HG3_Ill_svaba_1468:HG3_Ill_scalpel_1211:HG3_Ill_SVrefine2DISCOVARDovetail_819:HG3_Ill_MetaSV_320:HG3_Ill_GATKHCSBGrefine_789:HG2_PB_assemblyticsfalcon_1745:HG2_PB_SVrefine2PBcRplusDovetail_769:HG2_PB_SVrefine2PB10Xhap12_935:HG2_PB_SVrefine2Falcon2Bionano_318:HG2_PB_SVrefine2Falcon1plusDovetail_791:HG2_Ill_svaba_1429:HG2_Ill_scalpel_1123:HG2_Ill_MetaSV_330;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_761:HG4_PB_pbsv_1163:HG4_PB_SVrefine2PBcRDovetail_634:HG4_PB_SVrefine2Falcon1Dovetail_736:HG4_Ill_svaba_1430:HG4_Ill_scalpel_1085:HG4_Ill_MetaSV_349:HG4_Ill_GATKHC_1867:HG4_Ill_GATKHCSBGrefine_790:HG3_PB_pbsv_1154:HG3_PB_assemblyticsfalcon_1727:HG3_PB_SVrefine2Falcon1Dovetail_712:HG3_Ill_svaba_1468:HG3_Ill_scalpel_1211:HG3_Ill_SVrefine2DISCOVARDovetail_819:HG3_Ill_MetaSV_320:HG3_Ill_GATKHCSBGrefine_789:HG2_PB_assemblyticsfalcon_1745:HG2_PB_SVrefine2PBcRplusDovetail_769:HG2_PB_SVrefine2PB10Xhap12_935:HG2_PB_SVrefine2Falcon2Bionano_318:HG2_PB_SVrefine2Falcon1plusDovetail_791:HG2_Ill_svaba_1429:HG2_Ill_scalpel_1123:HG2_Ill_MetaSV_330;NumExactMatchSVs=25;ClusterMaxShiftDist=0.137313;ClusterMaxSizeDiff=0.137313;ClusterMaxEditDist=0.137313;PBcalls=17;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=11;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-172;DistBack=99462;DistForward=6308;DistMin=6308;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=1:216185305-216185488;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=254.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:1/1:1:20:1:19:./.:0:2:0:2:1/1:0:33:./.:.:.:.:.:.
chr1	217269958	HG3_Ill_GATKHC_1944	TCACATGTTTAAAAAGCCATTTCCTTGATTAACTTCCTCCAGGATGACTCCTCCCACTGTCCTCCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_901:HG2_PB_HySA_2271:HG2_PB_PB10Xdip_960:HG3_PB_pbsv_1158:HG3_Ill_svaba_1477:HG3_Ill_scalpel_1218:HG3_Ill_manta_246:HG3_Ill_Krunchall_1639:HG3_Ill_GATKHC_1944:HG3_Ill_GATKHCSBGrefine_792:HG3_Ill_250bpfermikitraw_1572:HG3_10X_allpass_223:HG2_PB_pbsv_1157:HG2_Ill_svaba_1433:HG2_Ill_scalpel_1131:HG2_Ill_breakscan11_132:HG2_Ill_SpiralSDKrefine_1147:HG2_Ill_SVrefine2DISCOVARplusDovetail_947:HG2_Ill_Krunchall_1600:HG2_Ill_GATKHC_1901:HG2_Ill_GATKHCSBGrefine_766:HG2_Ill_250bpfermikitraw_1581:HG2_Ill_150bpfermikitraw_1456:HG2_CG_vcfBeta_706;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_901:HG3_PB_pbsv_1158:HG3_Ill_svaba_1477:HG3_Ill_scalpel_1218:HG3_Ill_manta_246:HG3_Ill_Krunchall_1639:HG3_Ill_GATKHC_1944:HG3_Ill_GATKHCSBGrefine_792:HG3_Ill_250bpfermikitraw_1572:HG3_10X_allpass_223:HG2_PB_pbsv_1157:HG2_Ill_svaba_1433:HG2_Ill_scalpel_1131:HG2_Ill_breakscan11_132:HG2_Ill_SpiralSDKrefine_1147:HG2_Ill_SVrefine2DISCOVARplusDovetail_947:HG2_Ill_Krunchall_1600:HG2_Ill_GATKHC_1901:HG2_Ill_GATKHCSBGrefine_766:HG2_Ill_250bpfermikitraw_1581:HG2_Ill_150bpfermikitraw_1456:HG2_CG_vcfBeta_706;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0775194;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.0775194;PBcalls=4;Illcalls=17;TenXcalls=2;CGcalls=1;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=1;HG2count=15;HG3count=9;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-65;DistBack=35797;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:217269959-217270025;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=255.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:33:./.:28:5:8:24:1|0:0:19:20:0:0/1:15:14:./.:.:.:.:.:.
chr1	217497112	HG2_Ill_Krunchall_1603	AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG2_PB_HySA_2273:HG2_PB_assemblyticsfalcon_1754:HG2_PB_assemblyticsPBcR_1759:HG2_Ill_breakscan11_133:HG2_PB_pbsv_1158:HG3_PB_HySA_1803:HG3_PB_pbsv_1159:HG3_Ill_manta_247:HG3_Ill_Krunchall_1640:HG3_Ill_GATKHCSBGrefine_793:HG3_10X_allpass_224:HG2_Ill_manta_321:HG2_Ill_Krunchall_1603:HG2_Ill_GATKHCSBGrefine_767:HG3_Ill_Spiral_1265:HG2_Ill_Spiral_64:HG2_10X_SVrefine210Xhap12_902;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_767:HG2_Ill_Krunchall_1603:HG2_Ill_manta_321:HG3_10X_allpass_224:HG3_Ill_GATKHCSBGrefine_793:HG3_Ill_Krunchall_1640:HG3_Ill_manta_247;NumExactMatchSVs=7;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.185185;PBcalls=6;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-56;DistBack=14119;DistForward=9906;DistMin=9906;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=1:217497109-217497200;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=256.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:29:./.:7:13:10:12:1|0:0:19:11:0:0/1:28:21:./.:.:.:.:.:.
chr1	217917511	HG2_Ill_SVrefine2DISCOVARplusDovetail_949	CAAAGAATTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_940:HG4_PB_assemblyticsfalcon_1701:HG3_PB_assemblyticsfalcon_1742:HG2_PB_assemblyticsPBcR_1762:HG3_Ill_Krunchall_1643:HG2_Ill_Krunchall_1606:HG2_PB_pbsv_1160:HG2_PB_PB10Xdip_966:HG2_PB_HySA_2274:HG2_Ill_tnscope_129:HG2_Ill_MetaSV_331:HG3_PB_pbsv_1163:HG3_PB_SVrefine2Falcon1Dovetail_718:HG3_Ill_MetaSV_322:HG3_Ill_GATKHCSBGrefine_796:HG3_10X_allpass_225:HG2_PB_SVrefine2PBcRplusDovetail_773:HG2_PB_SVrefine2PB10Xhap12_941:HG2_PB_SVrefine2Falcon1plusDovetail_795:HG2_Ill_SVrefine2DISCOVARplusDovetail_949:HG2_Ill_GATKHCSBGrefine_769:HG2_10X_allpass_179:HG2_10X_SVrefine210Xhap12_903:HG2_Ill_breakscan11_134;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_903:HG2_10X_allpass_179:HG2_Ill_GATKHCSBGrefine_769:HG2_Ill_SVrefine2DISCOVARplusDovetail_949:HG2_PB_SVrefine2Falcon1plusDovetail_795:HG2_PB_SVrefine2PB10Xhap12_941:HG2_PB_SVrefine2PBcRplusDovetail_773:HG3_10X_allpass_225:HG3_Ill_GATKHCSBGrefine_796:HG3_Ill_MetaSV_322:HG3_PB_SVrefine2Falcon1Dovetail_718:HG3_PB_pbsv_1163;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0679612;ClusterMaxSizeDiff=0.0679612;ClusterMaxEditDist=0.0679612;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=38738;DistForward=5502;DistMin=5502;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=1:217917512-217917835;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=257.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:29:0|1:18:0:1:34:1|0:0:23:44:0:0/1:29:18:0/1:30:10:.:.:.
chr1	218182488	HG2_10X_SVrefine210Xhap12_904	TTATTTTGACTTCTTTTTTTTTTTTAATAGAAAACATTCTTTTTTTTTTTTCAGTCATTATTTGTTTGTACAGCTGTGTGAATTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTCCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCGATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGGTATGTGGAGTTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTCAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTTAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGAGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGGAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTCTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTTGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTACTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCATCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCAGTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGCAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAAGGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCAGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTGCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGATAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGTTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCAGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCCCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGCGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACAGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTTCCTAGTGAGATGAACCCGGCACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCC	T	20	PASS	ClusterIDs=HG3_10X_allpass_226:HG4_10X_allpass_197:HG2_10X_allpass_180:HG4_PB_assemblyticsfalcon_1703:HG3_PB_assemblyticsfalcon_1745:HG2_PB_assemblyticsfalcon_1759:HG2_PB_assemblyticsPBcR_1765:HG4_Ill_Krunchall_1680:HG3_Ill_Krunchall_1646:HG2_Ill_Krunchall_1610:HG4_PB_pbsv_1168:HG4_PB_SVrefine2PBcRDovetail_636:HG4_PB_SVrefine2Falcon1Dovetail_738:HG4_Ill_MetaSV_350:HG4_Ill_GATKHCSBGrefine_795:HG3_PB_pbsv_1164:HG3_PB_SVrefine2Falcon1Dovetail_719:HG3_Ill_SVrefine2DISCOVARDovetail_825:HG3_Ill_MetaSV_323:HG3_Ill_GATKHCSBGrefine_797:HG2_PB_pbsv_1161:HG2_PB_SVrefine2PBcRplusDovetail_774:HG2_PB_SVrefine2PB10Xhap12_942:HG2_PB_SVrefine2Falcon2Bionano_321:HG2_PB_SVrefine2Falcon1plusDovetail_796:HG2_Ill_SVrefine2DISCOVARplusDovetail_950:HG2_Ill_MetaSV_332:HG2_Ill_GATKHCSBGrefine_770:HG2_10X_SVrefine210Xhap12_904:HG2_Ill_breakscan11_135:HG2_Ill_tnscope_130;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_904:HG2_Ill_GATKHCSBGrefine_770:HG2_Ill_MetaSV_332:HG2_Ill_SVrefine2DISCOVARplusDovetail_950:HG2_PB_SVrefine2Falcon1plusDovetail_796:HG2_PB_SVrefine2Falcon2Bionano_321:HG2_PB_SVrefine2PB10Xhap12_942:HG2_PB_SVrefine2PBcRplusDovetail_774:HG2_PB_pbsv_1161:HG3_Ill_GATKHCSBGrefine_797:HG3_Ill_MetaSV_323:HG3_Ill_SVrefine2DISCOVARDovetail_825:HG3_PB_SVrefine2Falcon1Dovetail_719:HG3_PB_pbsv_1164:HG4_Ill_GATKHCSBGrefine_795:HG4_Ill_MetaSV_350:HG4_PB_SVrefine2Falcon1Dovetail_738:HG4_PB_SVrefine2PBcRDovetail_636:HG4_PB_pbsv_1168;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00442587;ClusterMaxSizeDiff=0.00442587;ClusterMaxEditDist=0.00442587;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6106;DistBack=3977;DistForward=26253;DistMin=3977;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:218182489-218188608;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:93:1/1:1:17:0:22:1/1:0:22:0:21:1/1:0:30:1/1:0:453:6339:.:.
chr1	218785913	HG2_10X_allpass_181	GCAAAAGCTTTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACTACAGGCACCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG3_Ill_Spiral_1271:HG2_Ill_Krunchall_1612:HG3_PB_assemblyticsfalcon_1749:HG2_PB_assemblyticsfalcon_1763:HG2_PB_assemblyticsPBcR_1767:HG3_PB_HySA_1809:HG4_PB_pbsv_1172:HG2_Ill_tnscope_131:HG4_Ill_scalpel_1095:HG4_Ill_manta_281:HG4_Ill_GATKHCSBGrefine_797:HG4_10X_allpass_199:HG3_PB_pbsv_1167:HG3_PB_SVrefine2Falcon1Dovetail_722:HG3_Ill_manta_249:HG3_Ill_SVrefine2DISCOVARDovetail_828:HG3_Ill_GATKHCSBGrefine_799:HG3_10X_allpass_228:HG2_PB_pbsv_1164:HG2_PB_SVrefine2PBcRplusDovetail_775:HG2_PB_SVrefine2PB10Xhap12_944:HG2_PB_SVrefine2Falcon1plusDovetail_799:HG2_Ill_scalpel_1139:HG2_Ill_breakscan11_136:HG2_Ill_SVrefine2DISCOVARplusDovetail_952:HG2_Ill_MetaSV_333:HG2_Ill_GATKHCSBGrefine_771:HG2_10X_allpass_181:HG4_Ill_Spiral_88;NumClusterSVs=29;ExactMatchIDs=HG2_10X_allpass_181:HG2_Ill_GATKHCSBGrefine_771:HG2_Ill_MetaSV_333:HG2_Ill_SVrefine2DISCOVARplusDovetail_952:HG2_Ill_breakscan11_136:HG2_Ill_scalpel_1139:HG2_PB_SVrefine2Falcon1plusDovetail_799:HG2_PB_SVrefine2PB10Xhap12_944:HG2_PB_SVrefine2PBcRplusDovetail_775:HG2_PB_pbsv_1164:HG3_10X_allpass_228:HG3_Ill_GATKHCSBGrefine_799:HG3_Ill_SVrefine2DISCOVARDovetail_828:HG3_Ill_manta_249:HG3_PB_SVrefine2Falcon1Dovetail_722:HG3_PB_pbsv_1167:HG4_10X_allpass_199:HG4_Ill_GATKHCSBGrefine_797:HG4_Ill_manta_281:HG4_Ill_scalpel_1095;NumExactMatchSVs=20;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.105263;PBcalls=11;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-321;DistForward=-292;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=1:218785914-218786250;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=259.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:26:0|1:30:2:1:25:./.:0:5:39:0:0/1:20:9:0/1:16:6:.:.:.
chr1	219923308	HG2_PB_SVrefine2PBcRplusDovetail_778	TTATGGACTCATTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCTCCCTGGCTGGAGCGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_65:HG4_PB_assemblyticsfalcon_1718:HG4_Ill_Krunchall_1693:HG3_Ill_Krunchall_1661:HG2_Ill_Krunchall_1623:HG3_Ill_Spiral_1277:HG3_PB_HySA_1821:HG2_PB_HySA_2289:HG4_PB_pbsv_1179:HG4_PB_SVrefine2PBcRDovetail_640:HG4_PB_SVrefine2Falcon1Dovetail_743:HG4_Ill_scalpel_1104:HG4_Ill_manta_284:HG4_Ill_SVrefine2DISCOVARDovetail_882:HG4_Ill_GATKHCSBGrefine_801:HG4_10X_allpass_201:HG3_PB_pbsv_1173:HG3_PB_assemblyticsfalcon_1756:HG3_PB_SVrefine2PBcRDovetail_644:HG3_PB_SVrefine2Falcon1Dovetail_726:HG3_Ill_scalpel_1238:HG3_Ill_manta_252:HG3_Ill_SVrefine2DISCOVARDovetail_833:HG3_Ill_GATKHCSBGrefine_804:HG2_PB_pbsv_1170:HG2_PB_assemblyticsfalcon_1774:HG2_PB_assemblyticsPBcR_1777:HG2_PB_SVrefine2PBcRplusDovetail_778:HG2_PB_SVrefine2PB10Xhap12_949:HG2_PB_SVrefine2Falcon2Bionano_325:HG2_PB_SVrefine2Falcon1plusDovetail_803:HG2_Ill_scalpel_1148:HG2_Ill_manta_324:HG2_Ill_SpiralSDKrefine_1158:HG2_Ill_SVrefine2DISCOVARplusDovetail_957:HG2_Ill_MetaSV_336:HG2_Ill_GATKHCSBGrefine_776:HG2_10X_allpass_182:HG2_10X_SVrefine210Xhap12_908:HG2_Ill_breakscan11_137:HG4_Ill_Spiral_89:HG4_Ill_MetaSV_354:HG3_Ill_MetaSV_328:HG2_Ill_tnscope_132;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_908:HG2_10X_allpass_182:HG2_Ill_GATKHCSBGrefine_776:HG2_Ill_MetaSV_336:HG2_Ill_SVrefine2DISCOVARplusDovetail_957:HG2_Ill_SpiralSDKrefine_1158:HG2_Ill_manta_324:HG2_Ill_scalpel_1148:HG2_PB_SVrefine2Falcon1plusDovetail_803:HG2_PB_SVrefine2Falcon2Bionano_325:HG2_PB_SVrefine2PB10Xhap12_949:HG2_PB_SVrefine2PBcRplusDovetail_778:HG2_PB_assemblyticsPBcR_1777:HG2_PB_assemblyticsfalcon_1774:HG2_PB_pbsv_1170:HG3_Ill_GATKHCSBGrefine_804:HG3_Ill_SVrefine2DISCOVARDovetail_833:HG3_Ill_manta_252:HG3_Ill_scalpel_1238:HG3_PB_SVrefine2Falcon1Dovetail_726:HG3_PB_SVrefine2PBcRDovetail_644:HG3_PB_assemblyticsfalcon_1756:HG3_PB_pbsv_1173:HG4_10X_allpass_201:HG4_Ill_GATKHCSBGrefine_801:HG4_Ill_SVrefine2DISCOVARDovetail_882:HG4_Ill_manta_284:HG4_Ill_scalpel_1104:HG4_PB_SVrefine2Falcon1Dovetail_743:HG4_PB_SVrefine2PBcRDovetail_640;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0929487;ClusterMaxSizeDiff=0.0929487;ClusterMaxEditDist=0.0929487;PBcalls=17;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=13;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=46766;DistForward=33316;DistMin=33316;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:219923309-219923641;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:0:12:1:21:./.:0:19:1:15:1/1:0:37:1/1:1:12:.:.:.
chr1	220114825	HG3_Ill_manta_253	CCCTTCCTTCCTTCCTCCCTCCCTTCCTCTCTGCCTTCCTCTCTTCTTCCCTTCCTTCCTTCCTTCTTTCCTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_913:HG2_PB_HySA_2293:HG4_PB_HySA_1793:HG4_PB_assemblyticsfalcon_1722:HG3_PB_pbsv_1176:HG2_PB_pbsv_1174:HG4_PB_pbsv_1182:HG3_PB_HySA_1824:HG4_Ill_svaba_1451:HG4_Ill_Krunchall_1696:HG4_Ill_GATKHCSBGrefine_805:HG4_Ill_250bpfermikitraw_1582:HG4_Ill_150bpfermikitraw_1543:HG3_Ill_svaba_1500:HG3_Ill_manta_253:HG3_Ill_Krunchall_1663:HG3_Ill_GATKHCSBGrefine_805:HG3_Ill_250bpfermikitraw_1586:HG2_Ill_svaba_1451:HG2_Ill_manta_325:HG2_Ill_SpiralSDKrefine_1161:HG2_Ill_GATKHCSBGrefine_779:HG2_Ill_250bpfermikitraw_1594:HG2_Ill_150bpfermikitraw_1469:HG4_PB_SVrefine2PBcRDovetail_643:HG4_Ill_SVrefine2DISCOVARDovetail_885:HG3_PB_SVrefine2PBcRDovetail_647:HG3_PB_SVrefine2Falcon1Dovetail_729:HG3_Ill_SVrefine2DISCOVARDovetail_837:HG2_PB_SVrefine2PBcRplusDovetail_781:HG2_PB_SVrefine2PB10Xhap12_954:HG2_PB_SVrefine2Falcon2Bionano_329:HG2_PB_SVrefine2Falcon1plusDovetail_806:HG2_Ill_SVrefine2DISCOVARplusDovetail_960;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1469:HG2_Ill_250bpfermikitraw_1594:HG2_Ill_GATKHCSBGrefine_779:HG2_Ill_SpiralSDKrefine_1161:HG2_Ill_manta_325:HG2_Ill_svaba_1451:HG3_Ill_250bpfermikitraw_1586:HG3_Ill_GATKHCSBGrefine_805:HG3_Ill_Krunchall_1663:HG3_Ill_manta_253:HG3_Ill_svaba_1500:HG4_Ill_150bpfermikitraw_1543:HG4_Ill_250bpfermikitraw_1582:HG4_Ill_GATKHCSBGrefine_805:HG4_Ill_Krunchall_1696:HG4_Ill_svaba_1451;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0277778;PBcalls=14;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-72;DistBack=15848;DistForward=-7;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=140;REFWIDENED=1:220114819-220115030;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:67:1/1:4:29:2:26:1/1:1:9:0:8:1/1:0:37:./.:.:.:.:.:.
chr1	220226025	HG3_Ill_Cortex_274	TTTGTATAATATTTGTATTATATTTGTATAATTTGTATAATATATAATTTGTATATATTTGTATAATATTTGTAATATATTTG	T	20	PASS	ClusterIDs=HG3_PB_pbsv_1178:HG2_PB_HySA_2298:HG4_Ill_svaba_1452:HG4_Ill_scalpel_1108:HG4_Ill_manta_285:HG4_Ill_Krunchall_1699:HG4_Ill_GATKHC_1908:HG4_Ill_GATKHCSBGrefine_807:HG4_Ill_Cortex_258:HG4_Ill_250bpfermikitraw_1586:HG4_Ill_150bpfermikitraw_1547:HG4_CG_vcfBeta_806:HG4_10X_allpass_202:HG3_PB_assemblyticsfalcon_1762:HG3_Ill_svaba_1502:HG3_Ill_scalpel_1240:HG3_Ill_manta_254:HG3_Ill_Krunchall_1665:HG3_Ill_GATKHC_1972:HG3_Ill_GATKHCSBGrefine_808:HG3_Ill_Cortex_274:HG3_Ill_250bpfermikitraw_1588:HG3_Ill_150bpfermikitraw_1517:HG3_CG_vcfBeta_704:HG3_10X_allpass_229:HG2_PB_assemblyticsPBcR_1783:HG2_Ill_svaba_1454:HG2_Ill_scalpel_1151:HG2_Ill_manta_327:HG2_Ill_SpiralSDKrefine_1165:HG2_Ill_Krunchall_1629:HG2_Ill_GATKHC_1929:HG2_Ill_GATKHCSBGrefine_782:HG2_Ill_Cortex_551:HG2_Ill_250bpfermikitraw_1597:HG2_Ill_150bpfermikitraw_1473:HG2_CG_vcfBeta_714:HG2_10X_allpass_183:HG4_PB_assemblyticsfalcon_1726:HG2_PB_assemblyticsfalcon_1780:HG4_PB_pbsv_1185:HG2_PB_pbsv_1177:HG2_Ill_breakscan11_138;NumClusterSVs=43;ExactMatchIDs=HG2_10X_allpass_183:HG2_CG_vcfBeta_714:HG2_Ill_150bpfermikitraw_1473:HG2_Ill_250bpfermikitraw_1597:HG2_Ill_Cortex_551:HG2_Ill_GATKHCSBGrefine_782:HG2_Ill_GATKHC_1929:HG2_Ill_Krunchall_1629:HG2_Ill_SpiralSDKrefine_1165:HG2_Ill_manta_327:HG2_Ill_scalpel_1151:HG2_Ill_svaba_1454:HG2_PB_assemblyticsPBcR_1783:HG3_10X_allpass_229:HG3_CG_vcfBeta_704:HG3_Ill_150bpfermikitraw_1517:HG3_Ill_250bpfermikitraw_1588:HG3_Ill_Cortex_274:HG3_Ill_GATKHCSBGrefine_808:HG3_Ill_GATKHC_1972:HG3_Ill_Krunchall_1665:HG3_Ill_manta_254:HG3_Ill_scalpel_1240:HG3_Ill_svaba_1502:HG3_PB_assemblyticsfalcon_1762:HG4_10X_allpass_202:HG4_CG_vcfBeta_806:HG4_Ill_150bpfermikitraw_1547:HG4_Ill_250bpfermikitraw_1586:HG4_Ill_Cortex_258:HG4_Ill_GATKHCSBGrefine_807:HG4_Ill_GATKHC_1908:HG4_Ill_Krunchall_1699:HG4_Ill_manta_285:HG4_Ill_scalpel_1108:HG4_Ill_svaba_1452;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0365854;PBcalls=8;Illcalls=29;TenXcalls=3;CGcalls=3;PBexactcalls=2;Illexactcalls=28;TenXexactcalls=3;CGexactcalls=3;HG2count=17;HG3count=13;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-82;DistBack=31838;DistForward=-32;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:220226024-220226109;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:3:25:1/1:2:9:1:7:1/1:0:25:0:28:1/1:0:39:./.:.:.:.:.:.
chr1	220285454	HG2_Ill_GATKHCSBGrefine_783	TCCGACCACCTACTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_139:HG2_10X_allpass_184:HG3_PB_assemblyticsfalcon_1763:HG4_PB_assemblyticsfalcon_1727:HG3_PB_pbsv_1179:HG2_PB_pbsv_1178:HG2_PB_HySA_2299:HG3_Ill_MetaSV_329:HG2_Ill_tnscope_133:HG2_Ill_MetaSV_339:HG4_PB_SVrefine2Falcon1Dovetail_748:HG3_PB_SVrefine2PBcRDovetail_648:HG3_PB_SVrefine2Falcon1Dovetail_732:HG3_Ill_manta_255:HG3_Ill_GATKHCSBGrefine_809:HG3_10X_allpass_230:HG2_PB_SVrefine2PB10Xhap12_957:HG2_Ill_scalpel_1152:HG2_Ill_SpiralSDKrefine_1166:HG2_Ill_GATKHCSBGrefine_783:HG2_10X_SVrefine210Xhap12_915:HG2_PB_assemblyticsfalcon_1781;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_915:HG2_Ill_GATKHCSBGrefine_783:HG2_Ill_SpiralSDKrefine_1166:HG2_Ill_scalpel_1152:HG2_PB_SVrefine2PB10Xhap12_957:HG3_10X_allpass_230:HG3_Ill_GATKHCSBGrefine_809:HG3_Ill_manta_255:HG3_PB_SVrefine2Falcon1Dovetail_732:HG3_PB_SVrefine2PBcRDovetail_648:HG4_PB_SVrefine2Falcon1Dovetail_748;NumExactMatchSVs=11;ClusterMaxShiftDist=0.105431;ClusterMaxSizeDiff=0.105431;ClusterMaxEditDist=0.105431;PBcalls=10;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=21824;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=1:220285455-220285791;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:17:0|1:37:2:3:21:1|0:0:23:41:2:0/1:28:11:0/1:26:5:.:.:.
chr1	220502943	HG2_PB_pbsv_1179	GAGGAGAAAGCATGGCTGGGAAGGGGAGAAGGTAGGAATTTAAAGCAAGTGCTTTTCGGAGTATTTTCTTCAAGCCTCATGTCTTTCTACACACCTGCTTGGCACAGCGTTAGTCATACGGACAGGGTGACTCTTCATGGATTGGCAGGACAATCACCACCCAGCCCCAGCCCATTTTCTGCCCTTCAGTCATTATTCTTCACCATCTAAATCTGGTTTGCCATGAAAACCAGTTCTGGGAGGTAAGAGTTTTTTTAAAAACCAGCAAGGCCTGTAAATAACATCAACACACACTGGGAAGAGGGAAGGAGAAGGGACCCAGATAGCAGTTTTAACTCTTTGTTTATTAATTTCTCATCTAGGAACTTGTAATTCTATATCTGCTTCAAGCGGAAGAAGCATAGTCTTCCCTGAGACTTCACTAAAGAGCACATGATTTCCACTTTCAGATTTTCTATTGATTTGGCAGAGTCAATTGTCCTAATGCCGAGTTTTGTGTTTTTGCCAGTCGGGTGGCAGTGAGTTGCATTTAATTTCTAGTATTGTTAATACTCTCATTATTATACTACAGCTTGAATAAGAATGAGTAGGAGACAGAGCAGGAATGTGTGTGCCAAGGAAAGCCATTTAAAAAAAATCC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_917:HG2_10X_allpass_185:HG2_PB_assemblyticsPBcR_1784:HG2_PB_assemblyticsfalcon_1782:HG2_Ill_tnscope_134:HG3_PB_pbsv_1180:HG3_Ill_manta_256:HG3_Ill_SVrefine2DISCOVARDovetail_840:HG3_Ill_MetaSV_330:HG3_Ill_GATKHCSBGrefine_810:HG3_10X_allpass_231:HG2_PB_pbsv_1179:HG2_PB_SVrefine2PBcRplusDovetail_783:HG2_PB_SVrefine2PB10Xhap12_958:HG2_PB_SVrefine2Falcon1plusDovetail_808:HG2_Ill_breakscan11_140:HG2_Ill_SpiralSDKrefine_1167:HG2_Ill_GATKHCSBGrefine_784;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_917:HG3_PB_pbsv_1180:HG3_Ill_manta_256:HG3_Ill_SVrefine2DISCOVARDovetail_840:HG3_Ill_MetaSV_330:HG3_Ill_GATKHCSBGrefine_810:HG3_10X_allpass_231:HG2_PB_pbsv_1179:HG2_PB_SVrefine2PBcRplusDovetail_783:HG2_PB_SVrefine2PB10Xhap12_958:HG2_PB_SVrefine2Falcon1plusDovetail_808:HG2_Ill_breakscan11_140:HG2_Ill_SpiralSDKrefine_1167:HG2_Ill_GATKHCSBGrefine_784;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0109804;ClusterMaxSizeDiff=0.0109804;ClusterMaxEditDist=0.0109804;PBcalls=7;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-639;DistBack=-638;DistForward=-639;DistMin=-639;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:220502944-220503584;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:24:./.:16:20:15:2:1|0:0:29:52:0:0/1:51:12:0/1:61:12:.:.:.
chr1	222034143	HG3_PB_SVrefine2PBcRDovetail_652	TAAAAGTAGAAAAAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTCTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_921:HG3_PB_pbsv_1187:HG3_PB_HySA_1843:HG4_Ill_Krunchall_1706:HG3_Ill_Krunchall_1680:HG2_Ill_Krunchall_1642:HG4_PB_assemblyticsfalcon_1736:HG2_PB_assemblyticsfalcon_1794:HG3_PB_assemblyticsfalcon_1776:HG2_PB_assemblyticsPBcR_1796:HG4_PB_pbsv_1192:HG2_PB_pbsv_1187:HG4_PB_HySA_1805:HG4_Ill_MetaSV_358:HG3_Ill_MetaSV_333:HG2_PB_HySA_2319:HG2_Ill_tnscope_135:HG2_Ill_MetaSV_344:HG4_PB_SVrefine2PBcRDovetail_649:HG4_PB_SVrefine2Falcon1Dovetail_752:HG4_Ill_scalpel_1114:HG4_Ill_manta_287:HG4_Ill_SVrefine2DISCOVARDovetail_893:HG4_Ill_GATKHCSBGrefine_812:HG4_10X_allpass_203:HG3_PB_SVrefine2PBcRDovetail_652:HG3_PB_SVrefine2Falcon1Dovetail_737:HG3_Ill_scalpel_1250:HG3_Ill_manta_257:HG3_Ill_SVrefine2DISCOVARDovetail_845:HG3_Ill_GATKHCSBGrefine_813:HG3_10X_allpass_232:HG2_PB_SVrefine2PBcRplusDovetail_788:HG2_PB_SVrefine2PB10Xhap12_964:HG2_PB_SVrefine2Falcon2Bionano_334:HG2_PB_SVrefine2Falcon1plusDovetail_813:HG2_Ill_manta_329:HG2_Ill_breakscan11_141:HG2_Ill_SVrefine2DISCOVARplusDovetail_968:HG2_Ill_GATKHCSBGrefine_789:HG2_10X_allpass_186;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_921:HG4_PB_SVrefine2PBcRDovetail_649:HG4_PB_SVrefine2Falcon1Dovetail_752:HG4_Ill_scalpel_1114:HG4_Ill_manta_287:HG4_Ill_SVrefine2DISCOVARDovetail_893:HG4_Ill_GATKHCSBGrefine_812:HG4_10X_allpass_203:HG3_PB_SVrefine2PBcRDovetail_652:HG3_PB_SVrefine2Falcon1Dovetail_737:HG3_Ill_scalpel_1250:HG3_Ill_manta_257:HG3_Ill_SVrefine2DISCOVARDovetail_845:HG3_Ill_GATKHCSBGrefine_813:HG3_10X_allpass_232:HG2_PB_SVrefine2PBcRplusDovetail_788:HG2_PB_SVrefine2PB10Xhap12_964:HG2_PB_SVrefine2Falcon2Bionano_334:HG2_PB_SVrefine2Falcon1plusDovetail_813:HG2_Ill_manta_329:HG2_Ill_breakscan11_141:HG2_Ill_SVrefine2DISCOVARplusDovetail_968:HG2_Ill_GATKHCSBGrefine_789:HG2_10X_allpass_186;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0888208;ClusterMaxSizeDiff=0.0888208;ClusterMaxEditDist=0.0888208;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=46260;DistForward=42585;DistMin=42585;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:222034144-222034490;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:1/1:1:15:2:18:1/1:0:18:0:25:1/1:0:40:./.:2:11:.:.:.
chr1	223204699	HG3_Ill_svaba_1520	ACTCTGCCTTGAAGCAAAAAGGGAGGTGGTAGATTTGGGAGCTGGGAAGCTGCAGGCTGCTTGGGGTAGATCGATGACAC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_928:HG4_PB_HySA_1818:HG3_PB_HySA_1860:HG2_Ill_breakscan11_142:HG4_PB_pbsv_1199:HG3_PB_pbsv_1194:HG2_PB_pbsv_1192:HG2_PB_HySA_2333:HG4_PB_SVrefine2PBcRDovetail_652:HG4_PB_SVrefine2Falcon1Dovetail_757:HG4_Ill_svaba_1471:HG4_Ill_SVrefine2DISCOVARDovetail_897:HG4_Ill_GATKHCSBGrefine_815:HG4_Ill_250bpfermikitraw_1607:HG4_Ill_150bpfermikitraw_1571:HG3_PB_SVrefine2PBcRDovetail_655:HG3_PB_SVrefine2Falcon1Dovetail_741:HG3_Ill_svaba_1520:HG3_Ill_SVrefine2DISCOVARDovetail_851:HG3_Ill_GATKHCSBGrefine_819:HG3_Ill_250bpfermikitraw_1613:HG3_Ill_150bpfermikitraw_1544:HG2_PB_SVrefine2PBcRplusDovetail_792:HG2_PB_SVrefine2PB10Xhap12_968:HG2_PB_SVrefine2Falcon2Bionano_340:HG2_PB_SVrefine2Falcon1plusDovetail_818:HG2_Ill_svaba_1473:HG2_Ill_scalpel_1169:HG2_Ill_manta_332:HG2_Ill_SpiralSDKrefine_1182:HG2_Ill_SVrefine2DISCOVARplusDovetail_973:HG2_Ill_GATKHCSBGrefine_793:HG2_Ill_250bpfermikitraw_1622;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_928:HG4_PB_SVrefine2PBcRDovetail_652:HG4_PB_SVrefine2Falcon1Dovetail_757:HG4_Ill_svaba_1471:HG4_Ill_SVrefine2DISCOVARDovetail_897:HG4_Ill_GATKHCSBGrefine_815:HG4_Ill_250bpfermikitraw_1607:HG4_Ill_150bpfermikitraw_1571:HG3_PB_SVrefine2PBcRDovetail_655:HG3_PB_SVrefine2Falcon1Dovetail_741:HG3_Ill_svaba_1520:HG3_Ill_SVrefine2DISCOVARDovetail_851:HG3_Ill_GATKHCSBGrefine_819:HG3_Ill_250bpfermikitraw_1613:HG3_Ill_150bpfermikitraw_1544:HG2_PB_SVrefine2PBcRplusDovetail_792:HG2_PB_SVrefine2PB10Xhap12_968:HG2_PB_SVrefine2Falcon2Bionano_340:HG2_PB_SVrefine2Falcon1plusDovetail_818:HG2_Ill_svaba_1473:HG2_Ill_scalpel_1169:HG2_Ill_manta_332:HG2_Ill_SpiralSDKrefine_1182:HG2_Ill_SVrefine2DISCOVARplusDovetail_973:HG2_Ill_GATKHCSBGrefine_793:HG2_Ill_250bpfermikitraw_1622;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0382166;PBcalls=14;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-79;DistBack=61986;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=77;REFWIDENED=1:223204700-223204855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=266.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:1:29:1:21:1/1:0:7:0:5:1/1:0:43:./.:.:.:.:.:.
chr1	224247102	HG2_Ill_svaba_1481	TTAAATTAAGGGCCTTAAAAAAAAAAAAAAAAAAAAAAGAGAGACAGAGAGATCACTTGGGTATTCGGCATATTCGATTCCCTCTAAAAGGTTCTGTATCATATTTATTCACTGAGCAAAGTCACCCTGTCAGTTTCAGAATTTGAGGTCAAAGTCATTTTGAGAAATAAAGGCAGATTGTCTTTTGGTTGTTCGATTTGTCTTGAAGGATATGGTATTTGTCAAAACAGCAGTTATTCTCAAAAAGAATTCTATTATGTACTCTTAGAGATCAGAAGCTTTTTACTAATACTTGTTTATTTTCATTAACTGGGGAAAATATGAGTATTGTTTATTTTTACTCCTTTCTATGCTGCAAGTTAATAAAAATAAATCCCTTCAAAGTTAGTGATCAATGCAATGAAACAATATATTTAAAAACATTTCAATTAAATTAACTAAATATAAAAAAAAAAAAAAATAAAAAAAAAAAATAAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_348:HG4_PB_assemblyticsfalcon_1751:HG4_PB_pbsv_1207:HG3_PB_pbsv_1198:HG2_Ill_Krunchall_1665:HG3_PB_assemblyticsfalcon_1798:HG2_PB_assemblyticsfalcon_1816:HG2_PB_assemblyticsPBcR_1811:HG3_Ill_Spiral_1306:HG2_Ill_Spiral_66:HG4_PB_SVrefine2PBcRDovetail_655:HG4_PB_SVrefine2Falcon1Dovetail_762:HG4_Ill_svaba_1484:HG4_Ill_SVrefine2DISCOVARDovetail_901:HG4_Ill_GATKHCSBGrefine_821:HG3_PB_SVrefine2PBcRDovetail_658:HG3_PB_SVrefine2Falcon1Dovetail_748:HG3_Ill_svaba_1527:HG3_Ill_SVrefine2DISCOVARDovetail_856:HG3_Ill_GATKHCSBGrefine_823:HG3_10X_allpass_233:HG2_PB_pbsv_1199:HG2_PB_SVrefine2PBcRplusDovetail_797:HG2_PB_SVrefine2PB10Xhap12_975:HG2_PB_SVrefine2Falcon2Bionano_344:HG2_PB_SVrefine2Falcon1plusDovetail_827:HG2_PB_HySA_2360:HG2_Ill_svaba_1481:HG2_Ill_manta_333:HG2_Ill_SpiralSDKrefine_1187:HG2_Ill_SVrefine2DISCOVARplusDovetail_978:HG2_Ill_GATKHCSBGrefine_799:HG2_10X_allpass_187:HG2_10X_SVrefine210Xhap12_934:HG2_Ill_breakscan11_143:HG4_Ill_MetaSV_360:HG3_Ill_MetaSV_335:HG2_Ill_tnscope_136;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_934:HG2_10X_allpass_187:HG2_Ill_GATKHCSBGrefine_799:HG2_Ill_SVrefine2DISCOVARplusDovetail_978:HG2_Ill_SpiralSDKrefine_1187:HG2_Ill_manta_333:HG2_Ill_svaba_1481:HG2_PB_HySA_2360:HG2_PB_SVrefine2Falcon1plusDovetail_827:HG2_PB_SVrefine2Falcon2Bionano_344:HG2_PB_SVrefine2PB10Xhap12_975:HG2_PB_SVrefine2PBcRplusDovetail_797:HG2_PB_pbsv_1199:HG3_10X_allpass_233:HG3_Ill_GATKHCSBGrefine_823:HG3_Ill_SVrefine2DISCOVARDovetail_856:HG3_Ill_svaba_1527:HG3_PB_SVrefine2Falcon1Dovetail_748:HG3_PB_SVrefine2PBcRDovetail_658:HG4_Ill_GATKHCSBGrefine_821:HG4_Ill_SVrefine2DISCOVARDovetail_901:HG4_Ill_svaba_1484:HG4_PB_SVrefine2Falcon1Dovetail_762:HG4_PB_SVrefine2PBcRDovetail_655;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0619658;ClusterMaxSizeDiff=0.0619658;ClusterMaxEditDist=0.0619658;PBcalls=16;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-476;DistBack=-477;DistForward=-462;DistMin=-477;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:224247103-224247593;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:21:0:24:1/1:0:29:0:31:1/1:0:36:0/1:3:15:.:.:.
chr1	224392821	HG3_Ill_SVrefine2DISCOVARDovetail_857	TGACTTGGCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCCGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_935:HG2_PB_HySA_2364:HG4_PB_assemblyticsfalcon_1752:HG3_PB_assemblyticsfalcon_1803:HG2_PB_assemblyticsfalcon_1819:HG2_PB_assemblyticsPBcR_1814:HG4_PB_pbsv_1208:HG4_PB_HySA_1838:HG4_Ill_MetaSV_361:HG3_PB_HySA_1877:HG3_Ill_MetaSV_336:HG2_Ill_tnscope_137:HG2_Ill_MetaSV_350:HG4_PB_SVrefine2PBcRDovetail_656:HG4_PB_SVrefine2Falcon1Dovetail_763:HG4_Ill_scalpel_1135:HG4_Ill_manta_289:HG4_Ill_SVrefine2DISCOVARDovetail_903:HG4_Ill_Krunchall_1738:HG4_Ill_GATKHCSBGrefine_822:HG4_10X_allpass_205:HG3_PB_pbsv_1200:HG3_PB_SVrefine2PBcRDovetail_659:HG3_PB_SVrefine2Falcon1Dovetail_749:HG3_Ill_scalpel_1274:HG3_Ill_manta_261:HG3_Ill_SVrefine2DISCOVARDovetail_857:HG3_Ill_Krunchall_1708:HG3_Ill_GATKHCSBGrefine_824:HG3_10X_allpass_234:HG2_PB_pbsv_1201:HG2_PB_SVrefine2PBcRplusDovetail_798:HG2_PB_SVrefine2PB10Xhap12_976:HG2_PB_SVrefine2Falcon2Bionano_345:HG2_PB_SVrefine2Falcon1plusDovetail_828:HG2_Ill_scalpel_1178:HG2_Ill_manta_335:HG2_Ill_SVrefine2DISCOVARplusDovetail_979:HG2_Ill_Krunchall_1670:HG2_Ill_GATKHCSBGrefine_800:HG2_10X_allpass_188;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_935:HG4_PB_SVrefine2PBcRDovetail_656:HG4_PB_SVrefine2Falcon1Dovetail_763:HG4_Ill_scalpel_1135:HG4_Ill_manta_289:HG4_Ill_SVrefine2DISCOVARDovetail_903:HG4_Ill_Krunchall_1738:HG4_Ill_GATKHCSBGrefine_822:HG4_10X_allpass_205:HG3_PB_pbsv_1200:HG3_PB_SVrefine2PBcRDovetail_659:HG3_PB_SVrefine2Falcon1Dovetail_749:HG3_Ill_scalpel_1274:HG3_Ill_manta_261:HG3_Ill_SVrefine2DISCOVARDovetail_857:HG3_Ill_Krunchall_1708:HG3_Ill_GATKHCSBGrefine_824:HG3_10X_allpass_234:HG2_PB_pbsv_1201:HG2_PB_SVrefine2PBcRplusDovetail_798:HG2_PB_SVrefine2PB10Xhap12_976:HG2_PB_SVrefine2Falcon2Bionano_345:HG2_PB_SVrefine2Falcon1plusDovetail_828:HG2_Ill_scalpel_1178:HG2_Ill_manta_335:HG2_Ill_SVrefine2DISCOVARplusDovetail_979:HG2_Ill_Krunchall_1670:HG2_Ill_GATKHCSBGrefine_800:HG2_10X_allpass_188;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0811688;ClusterMaxSizeDiff=0.0811688;ClusterMaxEditDist=0.0811688;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=-397;DistForward=3607;DistMin=-397;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=1:224392822-224393147;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=268.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:16:0:29:1/1:0:29:0:33:1/1:0:35:0/1:2:10:.:.:.
chr1	224464613	HG2_Ill_250bpfermikitraw_1637	TTGACACATAAAACTAGTTTTATGACACATAAAACTAGTTTTATGACACATAAAACTAGTTTTA	T	20	PASS	ClusterIDs=HG2_10X_allpass_189:HG4_Ill_GATKHC_1956:HG4_Ill_GATKHCSBGrefine_824:HG2_Ill_GATKHC_1977:HG2_Ill_GATKHCSBGrefine_801:HG2_Ill_SpiralSDKrefine_1191:HG4_Ill_manta_290:HG2_Ill_manta_336:HG2_Ill_Spiral_67:HG4_PB_assemblyticsfalcon_1753:HG4_PB_pbsv_1209:HG2_PB_pbsv_1202:HG4_Ill_Krunchall_1741:HG2_Ill_svaba_1487:HG2_Ill_breakscan11_144:HG2_Ill_Krunchall_1672:HG2_Ill_250bpfermikitraw_1637:HG2_Ill_150bpfermikitraw_1510;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_189:HG4_Ill_Krunchall_1741:HG2_Ill_svaba_1487:HG2_Ill_breakscan11_144:HG2_Ill_Krunchall_1672:HG2_Ill_250bpfermikitraw_1637:HG2_Ill_150bpfermikitraw_1510;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0967742;ClusterMaxSizeDiff=0.0967742;ClusterMaxEditDist=0.0983607;PBcalls=3;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-63;DistBack=-22;DistForward=42013;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=41;REFWIDENED=1:224464614-224464717;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:18:./.:28:8:5:10:1|0:0:11:32:0:0/1:25:25:./.:.:.:.:.:.
chr1	224938699	HG3_Ill_GATKHCSBGrefine_826	ACACACACACACACACACACACACACACACACACACCACACACACACACACACACACACACACACACACACCACACACACACACACACACACACACACACACACCACACACACACACAC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_1202:HG2_PB_HySA_2368:HG3_Ill_Krunchall_1711:HG3_PB_SVrefine2Falcon1Dovetail_751:HG3_PB_assemblyticsfalcon_1805:HG3_Ill_scalpel_1276:HG3_Ill_GATKHC_2018:HG3_Ill_GATKHCSBGrefine_826:HG3_Ill_250bpfermikitraw_1629:HG3_Ill_150bpfermikitraw_1559:HG2_Ill_scalpel_1181:HG2_Ill_SpiralSDKrefine_1192:HG2_Ill_GATKHC_1979:HG2_Ill_GATKHCSBGrefine_802:HG2_Ill_250bpfermikitraw_1639:HG2_PB_pbsv_1204:HG2_10X_SVrefine210Xhap12_939:HG3_Ill_SVrefine2DISCOVARDovetail_860:HG2_PB_SVrefine2Falcon1plusDovetail_830:HG2_Ill_SVrefine2DISCOVARplusDovetail_984;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1639:HG2_Ill_GATKHCSBGrefine_802:HG2_Ill_GATKHC_1979:HG2_Ill_SpiralSDKrefine_1192:HG2_Ill_scalpel_1181:HG3_Ill_150bpfermikitraw_1559:HG3_Ill_250bpfermikitraw_1629:HG3_Ill_GATKHCSBGrefine_826:HG3_Ill_GATKHC_2018:HG3_Ill_scalpel_1276;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0595745;ClusterMaxSizeDiff=0.0595745;ClusterMaxEditDist=0.0680851;PBcalls=6;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-118;DistBack=-28;DistForward=-117;DistMin=-117;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=1:224938686-224938855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=270.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:26:0|1:31:1:2:23:0|1:38:1:0:9:0/1:3:13:./.:.:.:.:.:.
chr1	225256531	HG3_10X_allpass_235	TAAGAAGCTTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_145:HG3_PB_assemblyticsfalcon_1807:HG2_PB_assemblyticsfalcon_1824:HG4_PB_assemblyticsfalcon_1756:HG4_Ill_Krunchall_1744:HG3_Ill_Krunchall_1713:HG2_Ill_Krunchall_1675:HG4_PB_pbsv_1211:HG3_PB_pbsv_1203:HG4_PB_HySA_1844:HG3_PB_HySA_1881:HG3_Ill_MetaSV_338:HG2_Ill_MetaSV_352:HG4_PB_SVrefine2PBcRDovetail_658:HG4_PB_SVrefine2Falcon1Dovetail_765:HG4_Ill_scalpel_1139:HG4_Ill_manta_291:HG4_Ill_SVrefine2DISCOVARDovetail_906:HG4_Ill_MetaSV_364:HG4_Ill_GATKHCSBGrefine_825:HG4_10X_allpass_206:HG3_PB_SVrefine2PBcRDovetail_661:HG3_PB_SVrefine2Falcon1Dovetail_752:HG3_Ill_manta_262:HG3_Ill_SVrefine2DISCOVARDovetail_863:HG3_Ill_GATKHCSBGrefine_827:HG3_10X_allpass_235:HG2_PB_pbsv_1205:HG2_PB_SVrefine2PB10Xhap12_979:HG2_PB_SVrefine2Falcon1plusDovetail_831:HG2_Ill_manta_337:HG2_Ill_SpiralSDKrefine_1194:HG2_Ill_GATKHCSBGrefine_803:HG2_10X_allpass_190:HG2_10X_SVrefine210Xhap12_940;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_940:HG2_10X_allpass_190:HG2_Ill_GATKHCSBGrefine_803:HG2_Ill_SpiralSDKrefine_1194:HG2_Ill_manta_337:HG2_PB_SVrefine2Falcon1plusDovetail_831:HG2_PB_SVrefine2PB10Xhap12_979:HG2_PB_pbsv_1205:HG3_10X_allpass_235:HG3_Ill_GATKHCSBGrefine_827:HG3_Ill_SVrefine2DISCOVARDovetail_863:HG3_Ill_manta_262:HG3_PB_SVrefine2Falcon1Dovetail_752:HG3_PB_SVrefine2PBcRDovetail_661:HG4_10X_allpass_206:HG4_Ill_GATKHCSBGrefine_825:HG4_Ill_MetaSV_364:HG4_Ill_SVrefine2DISCOVARDovetail_906:HG4_Ill_manta_291:HG4_Ill_scalpel_1139:HG4_PB_SVrefine2Falcon1Dovetail_765:HG4_PB_SVrefine2PBcRDovetail_658;NumExactMatchSVs=22;ClusterMaxShiftDist=0.102079;ClusterMaxSizeDiff=0.102079;ClusterMaxEditDist=0.102079;PBcalls=14;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-270;DistBack=-621;DistForward=-263;DistMin=-621;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:225256532-225256815;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=271.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:22:0|1:41:0:2:19:1|0:0:20:68:0:0/1:27:29:./.:.:.:.:.:.
chr1	225762315	HG4_Ill_MetaSV_366	AAAAAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGGTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAATATATATATAT	A	20	PASS	ClusterIDs=HG3_Ill_MetaSV_339:HG4_PB_assemblyticsfalcon_1759:HG4_10X_allpass_208:HG3_PB_assemblyticsfalcon_1815:HG2_PB_assemblyticsfalcon_1832:HG2_PB_assemblyticsPBcR_1824:HG3_PB_pbsv_1207:HG4_Ill_Krunchall_1755:HG4_Ill_scalpel_1145:HG4_Ill_manta_294:HG4_Ill_MetaSV_366:HG4_Ill_GATKHCSBGrefine_832:HG3_PB_HySA_1885:HG3_Ill_scalpel_1280:HG3_Ill_manta_264:HG3_Ill_GATKHCSBGrefine_832:HG3_10X_allpass_236:HG2_PB_HySA_2379:HG2_Ill_scalpel_1187:HG2_Ill_manta_339:HG2_Ill_GATKHCSBGrefine_810:HG2_10X_allpass_191:HG3_Ill_MetaSV_340:HG2_Ill_MetaSV_353:HG2_Ill_breakscan11_146:HG4_PB_pbsv_1216:HG2_PB_pbsv_1210:HG4_PB_SVrefine2PBcRDovetail_660:HG4_PB_SVrefine2Falcon1Dovetail_767:HG4_PB_HySA_1850:HG4_Ill_SVrefine2DISCOVARDovetail_911:HG3_PB_SVrefine2PBcRDovetail_662:HG3_PB_SVrefine2Falcon1Dovetail_754:HG3_Ill_SVrefine2DISCOVARDovetail_866:HG2_PB_SVrefine2PBcRplusDovetail_800:HG2_PB_SVrefine2PB10Xhap12_980:HG2_PB_SVrefine2Falcon2Bionano_348:HG2_PB_SVrefine2Falcon1plusDovetail_833:HG2_Ill_SVrefine2DISCOVARplusDovetail_986:HG2_10X_SVrefine210Xhap12_944:HG2_Ill_tnscope_138;NumClusterSVs=41;ExactMatchIDs=HG2_10X_allpass_191:HG2_Ill_GATKHCSBGrefine_810:HG2_Ill_manta_339:HG2_Ill_scalpel_1187:HG2_PB_HySA_2379:HG3_10X_allpass_236:HG3_Ill_GATKHCSBGrefine_832:HG3_Ill_manta_264:HG3_Ill_scalpel_1280:HG3_PB_HySA_1885:HG4_Ill_GATKHCSBGrefine_832:HG4_Ill_MetaSV_366:HG4_Ill_manta_294:HG4_Ill_scalpel_1145;NumExactMatchSVs=14;ClusterMaxShiftDist=0.125589;ClusterMaxSizeDiff=0.125589;ClusterMaxEditDist=0.125589;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=12041;DistForward=10283;DistMin=10283;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:225762308-225762639;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=272.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:1/1:0:6:0:5:1/1:0:12:0:16:1/1:0:33:1/1:1:12:.:.:.
chr1	225992542	HG2_Ill_svaba_1503	TATATATATATTATATATATATAATATATATATATATATATATAATATATATATATATATATA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_1208:HG2_PB_assemblyticsfalcon_1836:HG2_PB_pbsv_1212:HG3_PB_HySA_1886:HG4_PB_HySA_1852:HG4_Ill_svaba_1502:HG4_PB_assemblyticsfalcon_1761:HG2_PB_assemblyticsfalcon_1835:HG2_PB_HySA_2382:HG4_Ill_GATKHC_1970:HG4_Ill_GATKHCSBGrefine_835:HG2_Ill_scalpel_1189:HG2_Ill_Krunchall_1689:HG2_Ill_GATKHC_1995:HG2_Ill_GATKHCSBGrefine_813:HG4_Ill_svaba_1503:HG2_Ill_svaba_1504:HG2_Ill_manta_341:HG4_Ill_scalpel_1146:HG4_Ill_manta_296:HG4_Ill_Krunchall_1757:HG4_Ill_GATKHC_1969:HG4_Ill_GATKHCSBGrefine_834:HG4_Ill_150bpfermikitraw_1596:HG2_PB_assemblyticsPBcR_1827:HG4_PB_pbsv_1218:HG3_Ill_svaba_1544:HG3_Ill_GATKHC_2033:HG3_Ill_GATKHCSBGrefine_833:HG3_Ill_150bpfermikitraw_1572:HG3_10X_allpass_237:HG2_Ill_svaba_1503:HG2_Ill_scalpel_1188:HG2_Ill_SpiralSDKrefine_1201:HG2_Ill_Krunchall_1688:HG2_Ill_GATKHC_1994:HG2_Ill_GATKHCSBGrefine_812;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_812:HG2_Ill_GATKHC_1994:HG2_Ill_Krunchall_1688:HG2_Ill_SpiralSDKrefine_1201:HG2_Ill_scalpel_1188:HG2_Ill_svaba_1503:HG3_10X_allpass_237:HG3_Ill_150bpfermikitraw_1572:HG3_Ill_GATKHCSBGrefine_833:HG3_Ill_GATKHC_2033:HG3_Ill_svaba_1544;NumExactMatchSVs=11;ClusterMaxShiftDist=0.276423;ClusterMaxSizeDiff=0.276423;ClusterMaxEditDist=0.276423;PBcalls=10;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-62;DistBack=2;DistForward=2982;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=1:225992543-225992641;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=273.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:42:1/1:4:18:0:22:./.:9:2:0:20:./.:2:16:./.:.:.:.:.:.
chr1	226002814	HG2_Ill_scalpel_1190	CACAGCCACCAGGTGGAAGAAGCAACCCTGCCCTCTTCCGGTTCCATGTGTGCCTCACTGAGGCAGGACTTCCAGACCCTACCAGGAAGGCTGCTATCCGGGTCATAGTGATACCCTGTCAGGACATCGTTGTTTTTGTCTTGTTTTTTTTTGAGACAGGGTCTGGCTCTGTTGTCCAGGCTGGAGTGCAGTGGCGCCATCTCAGCTGTCTGCAAACTCCGCCCCACCAGGCTCAAGCCATCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGTGCACCACCATGCCCAGCTAATTTTCTTTTTTTTTTTTTTTTTTTTTTGTAGAG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_1221:HG4_PB_HySA_1855:HG2_PB_HySA_2385:HG4_Ill_Krunchall_1758:HG2_PB_SVrefine2PB10Xhap12_983:HG4_Ill_MetaSV_368:HG2_Ill_tnscope_139:HG2_Ill_MetaSV_356:HG4_PB_SVrefine2PBcRDovetail_661:HG4_Ill_manta_297:HG4_Ill_SVrefine2DISCOVARDovetail_914:HG4_Ill_GATKHCSBGrefine_838:HG4_10X_allpass_209:HG2_PB_pbsv_1215:HG2_PB_SVrefine2PBcRplusDovetail_803:HG2_PB_SVrefine2PB10Xhap12_982:HG2_PB_SVrefine2Falcon2Bionano_351:HG2_PB_SVrefine2Falcon1plusDovetail_836:HG2_Ill_scalpel_1190:HG2_Ill_manta_342:HG2_Ill_breakscan11_147:HG2_Ill_SpiralSDKrefine_1202:HG2_Ill_SVrefine2DISCOVARplusDovetail_989:HG2_Ill_GATKHCSBGrefine_815:HG2_10X_allpass_192:HG2_10X_SVrefine210Xhap12_946;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_946:HG2_10X_allpass_192:HG2_Ill_GATKHCSBGrefine_815:HG2_Ill_SVrefine2DISCOVARplusDovetail_989:HG2_Ill_SpiralSDKrefine_1202:HG2_Ill_breakscan11_147:HG2_Ill_manta_342:HG2_Ill_scalpel_1190:HG2_PB_SVrefine2Falcon1plusDovetail_836:HG2_PB_SVrefine2Falcon2Bionano_351:HG2_PB_SVrefine2PB10Xhap12_982:HG2_PB_SVrefine2PBcRplusDovetail_803:HG2_PB_pbsv_1215:HG4_10X_allpass_209:HG4_Ill_GATKHCSBGrefine_838:HG4_Ill_SVrefine2DISCOVARDovetail_914:HG4_Ill_manta_297:HG4_PB_SVrefine2PBcRDovetail_661;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00609756;ClusterMaxSizeDiff=0.00609756;ClusterMaxEditDist=0.00611621;PBcalls=10;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-327;DistForward=3623;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=1:226002815-226003144;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=274.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:./.:7:21:16:4:1|0:0:17:44:0:0/1:27:15:0/1:33:6:.:.:.
chr1	228024093	HG2_PB_SVrefine2PB10Xhap12_993	TAATAAAAGCTTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_2413:HG3_PB_HySA_1910:HG4_Ill_Krunchall_1773:HG3_Ill_Krunchall_1734:HG2_Ill_Krunchall_1699:HG3_PB_assemblyticsfalcon_1835:HG4_PB_assemblyticsfalcon_1781:HG2_PB_assemblyticsfalcon_1855:HG2_PB_assemblyticsPBcR_1847:HG4_Ill_Spiral_91:HG3_Ill_Spiral_1331:HG2_Ill_Spiral_68:HG3_PB_pbsv_1220:HG2_PB_pbsv_1227:HG4_PB_HySA_1876:HG4_PB_pbsv_1235:HG4_Ill_MetaSV_373:HG3_Ill_MetaSV_347:HG2_Ill_tnscope_140:HG2_Ill_MetaSV_362:HG4_PB_SVrefine2PBcRDovetail_668:HG4_PB_SVrefine2Falcon1Dovetail_776:HG4_Ill_scalpel_1155:HG4_Ill_manta_300:HG4_Ill_SVrefine2DISCOVARDovetail_925:HG4_Ill_GATKHCSBGrefine_846:HG3_PB_SVrefine2PBcRDovetail_670:HG3_PB_SVrefine2Falcon1Dovetail_762:HG3_Ill_scalpel_1291:HG3_Ill_manta_267:HG3_Ill_SVrefine2DISCOVARDovetail_877:HG3_Ill_GATKHCSBGrefine_843:HG3_10X_allpass_238:HG2_PB_SVrefine2PBcRplusDovetail_813:HG2_PB_SVrefine2PB10Xhap12_993:HG2_PB_SVrefine2Falcon2Bionano_360:HG2_PB_SVrefine2Falcon1plusDovetail_843:HG2_Ill_scalpel_1197:HG2_Ill_manta_345:HG2_Ill_SVrefine2DISCOVARplusDovetail_996:HG2_Ill_GATKHCSBGrefine_821:HG2_10X_allpass_195:HG2_10X_SVrefine210Xhap12_954:HG2_Ill_breakscan11_148;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_954:HG2_10X_allpass_195:HG2_Ill_GATKHCSBGrefine_821:HG2_Ill_SVrefine2DISCOVARplusDovetail_996:HG2_Ill_manta_345:HG2_Ill_scalpel_1197:HG2_PB_SVrefine2Falcon1plusDovetail_843:HG2_PB_SVrefine2Falcon2Bionano_360:HG2_PB_SVrefine2PB10Xhap12_993:HG2_PB_SVrefine2PBcRplusDovetail_813:HG3_10X_allpass_238:HG3_Ill_GATKHCSBGrefine_843:HG3_Ill_SVrefine2DISCOVARDovetail_877:HG3_Ill_manta_267:HG3_Ill_scalpel_1291:HG3_PB_SVrefine2Falcon1Dovetail_762:HG3_PB_SVrefine2PBcRDovetail_670:HG4_Ill_GATKHCSBGrefine_846:HG4_Ill_SVrefine2DISCOVARDovetail_925:HG4_Ill_manta_300:HG4_Ill_scalpel_1155:HG4_PB_SVrefine2Falcon1Dovetail_776:HG4_PB_SVrefine2PBcRDovetail_668;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0844156;ClusterMaxSizeDiff=0.0844156;ClusterMaxEditDist=0.0844156;PBcalls=18;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=19754;DistForward=8199;DistMin=8199;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=1:228024094-228024418;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:42:1/1:1:20:1:18:./.:0:14:1:14:1/1:0:47:0/1:2:16:.:.:.
chr1	228094375	HG2_Ill_svaba_1519	CTTCCTCCCTTTCTCTCCCTCCCTCCCACTCTCCTTCCTCCTTTCCTGTTCCTGCCTCTCCCTCTCCCTTCCTTCTTA	C	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_1837:HG2_PB_pbsv_1228:HG4_PB_pbsv_1236:HG4_Ill_svaba_1519:HG4_Ill_scalpel_1156:HG4_Ill_GATKHCSBGrefine_847:HG2_PB_assemblyticsfalcon_1857:HG2_Ill_svaba_1519:HG2_Ill_scalpel_1198:HG2_Ill_150bpfermikitraw_1535;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1535:HG2_Ill_scalpel_1198:HG2_Ill_svaba_1519:HG2_PB_assemblyticsfalcon_1857:HG4_Ill_GATKHCSBGrefine_847:HG4_Ill_scalpel_1156:HG4_Ill_svaba_1519:HG4_PB_pbsv_1236;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0129032;ClusterMaxSizeDiff=0.0129032;ClusterMaxEditDist=0.0258065;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-77;DistBack=22806;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=63;REFWIDENED=1:228094374-228094516;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=276.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:16:1|0:1:14:10:2:./.:0:11:35:3:./.:3:4:./.:.:.:.:.:.
chr1	228572160	HG3_PB_assemblyticsfalcon_1843	ACTAATAATTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_958:HG2_10X_allpass_196:HG2_PB_assemblyticsfalcon_1862:HG4_Ill_Krunchall_1777:HG2_Ill_Krunchall_1704:HG4_Ill_Spiral_92:HG2_Ill_Spiral_69:HG2_Ill_breakscan11_149:HG4_PB_pbsv_1240:HG4_Ill_MetaSV_375:HG2_Ill_tnscope_141:HG4_PB_assemblyticsfalcon_1789:HG4_PB_SVrefine2PBcRDovetail_670:HG4_Ill_scalpel_1161:HG4_Ill_SVrefine2DISCOVARDovetail_930:HG4_Ill_GATKHCSBGrefine_851:HG4_10X_allpass_210:HG3_PB_assemblyticsfalcon_1843:HG3_PB_SVrefine2Falcon1Dovetail_765:HG2_PB_pbsv_1231:HG2_PB_SVrefine2Falcon1plusDovetail_847:HG2_Ill_scalpel_1203:HG2_Ill_manta_346:HG2_Ill_MetaSV_363:HG2_Ill_GATKHCSBGrefine_824;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_958:HG4_PB_assemblyticsfalcon_1789:HG4_PB_SVrefine2PBcRDovetail_670:HG4_Ill_scalpel_1161:HG4_Ill_SVrefine2DISCOVARDovetail_930:HG4_Ill_GATKHCSBGrefine_851:HG4_10X_allpass_210:HG3_PB_assemblyticsfalcon_1843:HG3_PB_SVrefine2Falcon1Dovetail_765:HG2_PB_pbsv_1231:HG2_PB_SVrefine2Falcon1plusDovetail_847:HG2_Ill_scalpel_1203:HG2_Ill_manta_346:HG2_Ill_MetaSV_363:HG2_Ill_GATKHCSBGrefine_824;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0897833;ClusterMaxSizeDiff=0.0897833;ClusterMaxEditDist=0.0897833;PBcalls=8;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=33687;DistForward=-315;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:228572161-228572504;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:18:0|1:31:2:0:15:1|0:0:19:39:0:0/1:22:23:0/1:26:7:.:.:0.396371
chr1	228814805	HG2_PB_SVrefine2PBcRplusDovetail_816	TAGGGCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_1792:HG4_10X_allpass_211:HG2_PB_assemblyticsPBcR_1856:HG2_PB_assemblyticsfalcon_1863:HG3_PB_pbsv_1223:HG4_Ill_MetaSV_378:HG3_Ill_MetaSV_349:HG2_Ill_tnscope_142:HG2_Ill_MetaSV_366:HG4_PB_SVrefine2PBcRDovetail_672:HG4_PB_HySA_1884:HG4_Ill_scalpel_1162:HG4_Ill_manta_301:HG4_Ill_SVrefine2DISCOVARDovetail_932:HG4_Ill_GATKHCSBGrefine_853:HG3_PB_assemblyticsfalcon_1845:HG3_PB_SVrefine2PBcRDovetail_673:HG3_PB_SVrefine2Falcon1Dovetail_766:HG3_Ill_scalpel_1297:HG3_Ill_manta_269:HG3_Ill_SVrefine2DISCOVARDovetail_880:HG3_Ill_GATKHCSBGrefine_846:HG2_PB_pbsv_1232:HG2_PB_SVrefine2PBcRplusDovetail_816:HG2_PB_SVrefine2PB10Xhap12_998:HG2_PB_SVrefine2Falcon2Bionano_363:HG2_PB_SVrefine2Falcon1plusDovetail_848:HG2_PB_HySA_2424:HG2_Ill_scalpel_1204:HG2_Ill_manta_347:HG2_Ill_breakscan11_150:HG2_Ill_SVrefine2DISCOVARplusDovetail_999:HG2_Ill_GATKHCSBGrefine_826:HG2_10X_allpass_197:HG2_10X_SVrefine210Xhap12_960:HG4_PB_pbsv_1241:HG4_PB_SVrefine2Falcon1Dovetail_779;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_960:HG2_10X_allpass_197:HG2_Ill_GATKHCSBGrefine_826:HG2_Ill_SVrefine2DISCOVARplusDovetail_999:HG2_Ill_breakscan11_150:HG2_Ill_manta_347:HG2_Ill_scalpel_1204:HG2_PB_HySA_2424:HG2_PB_SVrefine2Falcon1plusDovetail_848:HG2_PB_SVrefine2Falcon2Bionano_363:HG2_PB_SVrefine2PB10Xhap12_998:HG2_PB_SVrefine2PBcRplusDovetail_816:HG2_PB_pbsv_1232:HG3_Ill_GATKHCSBGrefine_846:HG3_Ill_SVrefine2DISCOVARDovetail_880:HG3_Ill_manta_269:HG3_Ill_scalpel_1297:HG3_PB_SVrefine2Falcon1Dovetail_766:HG3_PB_SVrefine2PBcRDovetail_673:HG3_PB_assemblyticsfalcon_1845:HG4_Ill_GATKHCSBGrefine_853:HG4_Ill_SVrefine2DISCOVARDovetail_932:HG4_Ill_manta_301:HG4_Ill_scalpel_1162:HG4_PB_HySA_1884:HG4_PB_SVrefine2PBcRDovetail_672;NumExactMatchSVs=26;ClusterMaxShiftDist=0.170029;ClusterMaxSizeDiff=0.170029;ClusterMaxEditDist=0.170029;PBcalls=17;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=-396;DistForward=10587;DistMin=-396;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=1:228814806-228815154;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=278.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:./.:0:3:0:3:./.:0:2:0:9:1/1:0:53:1/1:1:14:.:.:.
chr1	229373388	HG2_Ill_SpiralSDKrefine_1221	GGAAGCAGCCAATTCACAAAAGAGTGAATAAACATATACAAATGTCCAAGCTCACCAATACAGAAAAAAAAAAAAAACACAGCTCAATAACATTTTTCATTTATCAGTCTGGCAAAGAGTTTCAAAATTTTTTAACAGCCAGTGGTGGAAAGGCGCAGGTGAGCCTTCTCACACACGGGGATGGAAGTTACTTTGGAAATAAGTTAAACGCTTTAACTCACACACACCCATTGTTCGTTTTTGGAATTATCCAAAGGAAATATAGTGGATCCATGCAAAGACAGCAATTTCAAGAGGCTCATCACAGGGTTATTTTTGATAGAAAAACCTAACAGTCCAACAATAGGATGCTGGTTAAATAAGGTATGATATACC	G	20	PASS	ClusterIDs=HG2_PB_pbsv_1235:HG2_10X_allpass_198:HG2_Ill_MetaSV_367:HG3_PB_HySA_1924:HG3_Ill_MetaSV_350:HG2_Ill_tnscope_143:HG3_PB_SVrefine2PBcRDovetail_676:HG3_PB_SVrefine2Falcon1Dovetail_769:HG3_Ill_scalpel_1303:HG3_Ill_manta_270:HG3_Ill_SVrefine2DISCOVARDovetail_883:HG3_Ill_GATKHCSBGrefine_850:HG3_10X_allpass_240:HG2_PB_assemblyticsPBcR_1861:HG2_PB_SVrefine2PBcRplusDovetail_817:HG2_PB_SVrefine2PB10Xhap12_1000:HG2_PB_SVrefine2Falcon2Bionano_364:HG2_PB_SVrefine2Falcon1plusDovetail_850:HG2_Ill_manta_348:HG2_Ill_SpiralSDKrefine_1221:HG2_Ill_SVrefine2DISCOVARplusDovetail_1001:HG2_Ill_GATKHCSBGrefine_830:HG2_10X_SVrefine210Xhap12_961:HG3_PB_assemblyticsfalcon_1854:HG2_PB_assemblyticsfalcon_1869:HG3_Ill_Spiral_1341:HG2_Ill_Spiral_70:HG2_Ill_Krunchall_1712:HG3_PB_pbsv_1226;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_961:HG2_Ill_GATKHCSBGrefine_830:HG2_Ill_SVrefine2DISCOVARplusDovetail_1001:HG2_Ill_SpiralSDKrefine_1221:HG2_Ill_manta_348:HG2_PB_SVrefine2Falcon1plusDovetail_850:HG2_PB_SVrefine2Falcon2Bionano_364:HG2_PB_SVrefine2PB10Xhap12_1000:HG2_PB_SVrefine2PBcRplusDovetail_817:HG2_PB_assemblyticsPBcR_1861:HG3_10X_allpass_240:HG3_Ill_GATKHCSBGrefine_850:HG3_Ill_SVrefine2DISCOVARDovetail_883:HG3_Ill_manta_270:HG3_Ill_scalpel_1303:HG3_PB_SVrefine2Falcon1Dovetail_769:HG3_PB_SVrefine2PBcRDovetail_676;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0704042;ClusterMaxSizeDiff=0.0704042;ClusterMaxEditDist=0.0704042;PBcalls=12;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-374;DistBack=36280;DistForward=9872;DistMin=9872;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:229373389-229373762;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=279.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:38:1|0:0:41:17:0:0|1:67:0:0:20:0/1:47:15:0/1:30:9:.:.:.
chr1	231897927	HG2_Ill_250bpfermikitraw_1701	CTTCTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTCTTCTTTTCTTTTCTTTTCTT	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_1733:HG4_Ill_GATKHC_2035:HG4_Ill_GATKHCSBGrefine_865:HG2_Ill_GATKHC_2054:HG2_Ill_GATKHCSBGrefine_839:HG4_CG_vcfBeta_863:HG4_PB_HySA_1919:HG4_Ill_svaba_1559:HG4_PB_assemblyticsfalcon_1835:HG4_Ill_250bpfermikitraw_1687:HG4_Ill_150bpfermikitraw_1642:HG2_PB_pbsv_1250:HG2_Ill_manta_353:HG2_Ill_SpiralSDKrefine_1236:HG2_Ill_250bpfermikitraw_1701:HG2_Ill_150bpfermikitraw_1565:HG4_PB_pbsv_1260:HG4_Ill_scalpel_1184:HG4_Ill_Krunchall_1812;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1565:HG2_Ill_250bpfermikitraw_1701:HG2_Ill_SpiralSDKrefine_1236:HG2_Ill_manta_353:HG2_PB_pbsv_1250:HG4_Ill_150bpfermikitraw_1642:HG4_Ill_250bpfermikitraw_1687:HG4_Ill_svaba_1559;NumExactMatchSVs=8;ClusterMaxShiftDist=0.307692;ClusterMaxSizeDiff=0.307692;ClusterMaxEditDist=0.307692;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=1;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-54;DistBack=28413;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=1:231897926-231897993;PctSeqSimilarity=0.9557;PctSizeSimilarity=0.8889;PctRecOverlap=0.4182;SizeDiff=6;StartDistance=-32;EndDistance=-26;GTMatch=0;TruScore=75;MatchId=280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:33:./.:10:19:7:11:./.:2:14:17:2:0/1:14:22:./.:.:.:.:.:.
chr1	232423118	HG2_10X_SVrefine210Xhap12_978	TGAAGGGTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_978:HG3_PB_assemblyticsfalcon_1890:HG2_PB_assemblyticsPBcR_1898:HG2_10X_allpass_199:HG4_Ill_Krunchall_1817:HG2_PB_pbsv_1254:HG2_Ill_Krunchall_1737:HG2_PB_SVrefine2PB10Xhap12_1017:HG4_Ill_Spiral_93:HG2_PB_HySA_2473:HG2_PB_PB10Xdip_1174:HG2_Ill_breakscan11_151:HG4_Ill_MetaSV_385:HG2_Ill_tnscope_144:HG4_PB_pbsv_1263:HG4_PB_SVrefine2PBcRDovetail_685:HG4_PB_SVrefine2Falcon1Dovetail_796:HG4_Ill_scalpel_1190:HG4_Ill_SVrefine2DISCOVARDovetail_946:HG4_Ill_GATKHCSBGrefine_867:HG4_10X_allpass_212:HG3_PB_SVrefine2Falcon1Dovetail_783:HG2_PB_SVrefine2PBcRplusDovetail_830:HG2_PB_SVrefine2PB10Xhap12_1016:HG2_PB_SVrefine2Falcon1plusDovetail_863:HG2_Ill_scalpel_1233:HG2_Ill_manta_354:HG2_Ill_SpiralSDKrefine_1243:HG2_Ill_SVrefine2DISCOVARplusDovetail_1017:HG2_Ill_GATKHCSBGrefine_841;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_978:HG4_PB_pbsv_1263:HG4_PB_SVrefine2PBcRDovetail_685:HG4_PB_SVrefine2Falcon1Dovetail_796:HG4_Ill_scalpel_1190:HG4_Ill_SVrefine2DISCOVARDovetail_946:HG4_Ill_GATKHCSBGrefine_867:HG4_10X_allpass_212:HG3_PB_SVrefine2Falcon1Dovetail_783:HG2_PB_SVrefine2PBcRplusDovetail_830:HG2_PB_SVrefine2PB10Xhap12_1016:HG2_PB_SVrefine2Falcon1plusDovetail_863:HG2_Ill_scalpel_1233:HG2_Ill_manta_354:HG2_Ill_SpiralSDKrefine_1243:HG2_Ill_SVrefine2DISCOVARplusDovetail_1017:HG2_Ill_GATKHCSBGrefine_841;NumExactMatchSVs=17;ClusterMaxShiftDist=0.101852;ClusterMaxSizeDiff=0.101852;ClusterMaxEditDist=0.101852;PBcalls=13;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-473;DistForward=3156;DistMin=-473;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:232423119-232423461;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:29:./.:16:7:3:20:1|0:0:21:47:0:0/1:28:27:0/1:18:10:.:.:.
chr1	232836575	HG4_10X_allpass_215	CACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATTTGAGTTCAGGAGTTTGAAATCAGCCTGACCAACATGGTGAAACTCTGTCTCTAGTAAAAATACAAAAATAAGCCGGGCGTGGTGGTGGGCATCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATTGCTTG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_834:HG2_PB_SVrefine2PB10Xhap12_1024:HG2_PB_SVrefine2Falcon2Bionano_378:HG4_PB_pbsv_1269:HG4_Ill_manta_310:HG4_Ill_SVrefine2DISCOVARDovetail_951:HG4_Ill_MetaSV_388:HG4_Ill_GATKHCSBGrefine_872:HG4_10X_allpass_215:HG2_PB_pbsv_1259:HG2_PB_assemblyticsfalcon_1912:HG2_PB_SVrefine2PB10Xhap12_1023:HG2_PB_SVrefine2Falcon1plusDovetail_867:HG2_Ill_manta_356:HG2_Ill_breakscan11_153:HG2_Ill_SpiralSDKrefine_1251:HG2_Ill_MetaSV_374:HG2_Ill_GATKHCSBGrefine_846:HG2_10X_allpass_201:HG2_10X_SVrefine210Xhap12_982:HG2_PB_assemblyticsPBcR_1903;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_982:HG2_10X_allpass_201:HG2_Ill_GATKHCSBGrefine_846:HG2_Ill_MetaSV_374:HG2_Ill_SpiralSDKrefine_1251:HG2_Ill_breakscan11_153:HG2_Ill_manta_356:HG2_PB_SVrefine2Falcon1plusDovetail_867:HG2_PB_SVrefine2PB10Xhap12_1023:HG2_PB_assemblyticsfalcon_1912:HG2_PB_pbsv_1259:HG4_10X_allpass_215:HG4_Ill_GATKHCSBGrefine_872:HG4_Ill_MetaSV_388:HG4_Ill_SVrefine2DISCOVARDovetail_951:HG4_Ill_manta_310;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0885417;ClusterMaxSizeDiff=0.0885417;ClusterMaxEditDist=0.0964467;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-184;DistBack=3143;DistForward=-184;DistMin=-184;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:232836576-232836760;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=282.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:34:0|1:34:1:4:28:1|0:0:17:41:0:./.:23:2:./.:.:.:.:.:.
chr1	233730163	HG2_PB_SVrefine2PB10Xhap12_1029	ATATATATACATAATACATATACATATATATTATGTATATATACACATAAATACATATGCATATATATTATGTATATATACATAAATACATATGCATATACATTATG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_870:HG4_PB_pbsv_1272:HG2_PB_pbsv_1263:HG4_PB_SVrefine2PBcRDovetail_691:HG4_Ill_SVrefine2DISCOVARDovetail_957:HG2_PB_SVrefine2PBcRplusDovetail_837:HG2_PB_SVrefine2PB10Xhap12_1029:HG2_PB_SVrefine2Falcon2Bionano_381;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_870:HG4_PB_SVrefine2PBcRDovetail_691:HG4_Ill_SVrefine2DISCOVARDovetail_957:HG2_PB_SVrefine2PBcRplusDovetail_837:HG2_PB_SVrefine2PB10Xhap12_1029:HG2_PB_SVrefine2Falcon2Bionano_381;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0188679;ClusterMaxSizeDiff=0.0188679;ClusterMaxEditDist=0.0566038;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-106;DistBack=21233;DistForward=-46;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=419;REFWIDENED=1:233730164-233730688;PctSeqSimilarity=0.9542;PctSizeSimilarity=0.9906;PctRecOverlap=0.3925;SizeDiff=1;StartDistance=-65;EndDistance=-64;GTMatch=0;TruScore=77;MatchId=283.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:37:1|0:5:29:20:4:0/0:33:0:49:1:./.:72:5:./.:.:.:.:.:.
chr1	233865139	HG3_PB_SVrefine2PBcRDovetail_687	TAAGAAACAGGGCTGGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCACCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_989:HG2_PB_SVrefine2PB10Xhap12_1031:HG2_PB_PB10Xdip_1184:HG3_Ill_GATKHCSBGrefine_866:HG2_Ill_GATKHCSBGrefine_848:HG3_Ill_MetaSV_362:HG2_Ill_MetaSV_377:HG2_PB_HySA_2491:HG2_PB_pbsv_1265:HG3_PB_pbsv_1252:HG2_Ill_tnscope_146:HG4_PB_SVrefine2Falcon1Dovetail_803:HG3_PB_SVrefine2PBcRDovetail_687:HG3_Ill_scalpel_1332:HG3_Ill_SVrefine2DISCOVARDovetail_904:HG3_10X_allpass_242:HG2_PB_SVrefine2PBcRplusDovetail_838:HG2_PB_SVrefine2PB10Xhap12_1030:HG2_PB_SVrefine2Falcon2Bionano_382:HG2_PB_SVrefine2Falcon1plusDovetail_871:HG2_Ill_MetaSV_376:HG2_10X_allpass_202;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_989:HG4_PB_SVrefine2Falcon1Dovetail_803:HG3_PB_SVrefine2PBcRDovetail_687:HG3_Ill_scalpel_1332:HG3_Ill_SVrefine2DISCOVARDovetail_904:HG3_10X_allpass_242:HG2_PB_SVrefine2PBcRplusDovetail_838:HG2_PB_SVrefine2PB10Xhap12_1030:HG2_PB_SVrefine2Falcon2Bionano_382:HG2_PB_SVrefine2Falcon1plusDovetail_871:HG2_Ill_MetaSV_376:HG2_10X_allpass_202;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0755287;ClusterMaxSizeDiff=0.0755287;ClusterMaxEditDist=0.0759878;PBcalls=11;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-332;DistForward=-8;DistMin=-332;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=317;REFWIDENED=1:233865140-233865787;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.997;PctRecOverlap=0.9518;SizeDiff=1;StartDistance=-16;EndDistance=-15;GTMatch=0;TruScore=98;MatchId=284.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:42:./.:21:7:1:31:0|1:35:0:0:17:0/1:22:22:0/1:37:7:.:.:.
chr1	233962209	HG2_PB_SVrefine2Falcon1plusDovetail_872	TTGTGTATTTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTATGCTAGTAAGCAACTTCAGCAAAGTCTCAGGATAAAAAATCAATGTGCAAACATCACAAGCATTCCTATATACCAATAATAGACAGACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTACAAAGAGAACAAAATACCTAGGAATACAACTTACAAGGAATATGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAGAGAGGACACAAACAAATGGGAAAACATTTCATGCTCATCGATAGGAATAATCAATATTGTGAAAATGGCCATACTGCCCAAAGTAATTTATAAATTCATTGCTATCCCCATCAAGCTACCATTGACTTTCTTCACAGATTTGGAAAAAACTACTTTAAATTTCATATGGAATCAAAAAAAGGCCCACATAGCCAAGACAATACTAAGCAAAAAGAACAAAGCTGGAGGCATCATGCTACCTGACTTCAAACTATACTGCAAGGCTACAGTAACCAAAACAGTAAGGTACTGGTACCAAAACAGATATATAGACCAATGGAACACAACACAGACCTCAGAAATAACACCACATGTCTACAACCTTCTGAGCTTTGACAAACCTGACGAAAACAAGCATTGGGGAAAAGATTCCCTATTTAATAAATGGTGTTGGGAAAACTGGCTAGCCATAGGCGGAAAACTGAAACTGGACCCCTTCCTTAAACCTTACACAAAGATTAACTCAAGATGGATTAAAGATTTAAATGTTAGACCTAAAACTATAAAAACCTGAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAAGACCTCATGACTAAAACACCAAAATCAATGGCAACAAAAGCCAAAATAGACAAATGGGAACTAATTAAACTAAAGAGCTTCTGCACAGCAACAGAAACTATCATCCAAGTGAACAGGCAACTTACAGAATGGGAGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCTAATATCCAGAATCTACAAAGAACTTAAACAAATTTACAAGAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGATATGAGCAGACACTCCTCAAAAGAAGACATTTATACAGCCCACAAACATATGAAAAAAACTCATCATCACTGGCCATTAGAGAAATGCAAATCAAAATCACAATGAGATACCATCTCACACCAGTTAGAATGACAGTCATTAAAAAATCAGGAAACAACAGATGCTGGAGAGGATGTGGAGAAAGAGGACTGTTTTTACACTGTTGATGGGAGTGTAAATTAGTTCAACCATTG	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_1752:HG4_10X_allpass_216:HG3_10X_allpass_243:HG2_PB_pbsv_1266:HG4_PB_assemblyticsfalcon_1850:HG3_PB_assemblyticsfalcon_1900:HG2_PB_assemblyticsPBcR_1913:HG3_PB_HySA_1963:HG2_PB_assemblyticsfalcon_1921:HG4_PB_SVrefine2PBcRDovetail_694:HG4_PB_SVrefine2Falcon1Dovetail_804:HG4_Ill_SVrefine2DISCOVARDovetail_961:HG3_PB_pbsv_1253:HG3_PB_SVrefine2PBcRDovetail_688:HG3_PB_SVrefine2Falcon1Dovetail_788:HG3_Ill_SVrefine2DISCOVARDovetail_906:HG2_PB_SVrefine2PBcRplusDovetail_839:HG2_PB_SVrefine2PB10Xhap12_1032:HG2_PB_SVrefine2Falcon2Bionano_383:HG2_PB_SVrefine2Falcon1plusDovetail_872:HG2_Ill_SVrefine2DISCOVARplusDovetail_1022:HG2_10X_allpass_203:HG2_10X_SVrefine210Xhap12_990:HG4_PB_HySA_1935:HG4_Ill_MetaSV_391:HG3_Ill_MetaSV_363:HG2_PB_HySA_2493:HG2_Ill_tnscope_147:HG2_Ill_MetaSV_378:HG4_PB_pbsv_1275:HG4_Ill_Krunchall_1833:HG3_Ill_Krunchall_1782:HG2_Ill_Krunchall_1753;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_990:HG2_10X_allpass_203:HG2_Ill_SVrefine2DISCOVARplusDovetail_1022:HG2_PB_SVrefine2Falcon1plusDovetail_872:HG2_PB_SVrefine2Falcon2Bionano_383:HG2_PB_SVrefine2PB10Xhap12_1032:HG2_PB_SVrefine2PBcRplusDovetail_839:HG3_Ill_SVrefine2DISCOVARDovetail_906:HG3_PB_SVrefine2Falcon1Dovetail_788:HG3_PB_SVrefine2PBcRDovetail_688:HG3_PB_pbsv_1253:HG4_Ill_SVrefine2DISCOVARDovetail_961:HG4_PB_SVrefine2Falcon1Dovetail_804:HG4_PB_SVrefine2PBcRDovetail_694;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0125879;ClusterMaxSizeDiff=0.0125879;ClusterMaxEditDist=0.0155325;PBcalls=18;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1343;DistBack=33835;DistForward=-1342;DistMin=-1342;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:233962210-233963554;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:67:1/1:0:25:1:23:1/1:0:20:0:19:1/1:0:37:1/1:4:97:1359:.:.
chr1	234083301	HG2_Ill_GATKHCSBGrefine_854	CGAAGGGCTCAAATGGGTACCACTACAGTTAAACCACAAGGCTAGATAATTAGGAAAAATTATCTAAAAAACAGGGCTGGAAACAGGCGTTTCTATGATAGACTTGCTTGCACCTCATATGGGAACCAGGATGATCTGAATTTTATCAAGCATCCCACAGGACATGTGTCCATACTCCCTGGGACAGTAAGAGGGAGGAGAGAGAGAGAGAGAGAGAAGAGAGAGGAGAGAGAGAATGTGTGAACGTGTAGCAAGATGATTTATTCTCAAGGCTGAGAGCCAAAAAAAGAGAAGTCTTAGTGGGCATTATCAAAGTTTGTTCTTCCTCCAGCCCCATCTTTGATCCTGCTGGGACTCCCAGGAGGGATTTCCATGTCAATCTCAGTGGTTTGTAATTGAGGTCAGTGTCTTCCCAAGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_991:HG2_PB_pbsv_1268:HG4_10X_allpass_217:HG4_Ill_GATKHCSBGrefine_880:HG2_Ill_GATKHCSBGrefine_854:HG2_Ill_tnscope_148:HG4_Ill_MetaSV_393:HG3_PB_assemblyticsfalcon_1902:HG3_PB_SVrefine2Falcon1Dovetail_790:HG2_PB_SVrefine2PB10Xhap12_1033;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_854:HG4_Ill_GATKHCSBGrefine_880;NumExactMatchSVs=2;ClusterMaxShiftDist=0.18799;ClusterMaxSizeDiff=0.18799;ClusterMaxEditDist=0.226913;PBcalls=4;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=-417;DistBack=11021;DistForward=-360;DistMin=-360;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=834;REFWIDENED=1:234083043-234084293;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=286.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:20:./.:27:13:10:4:./.:2:13:31:2:0/1:34:19:0/1:38:9:.:.:.
chr1	234587197	HG3_PB_SVrefine2PBcRDovetail_693	TAAAACTGATGAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_992:HG4_10X_allpass_218:HG2_PB_assemblyticsfalcon_1932:HG4_PB_assemblyticsfalcon_1860:HG3_PB_assemblyticsfalcon_1912:HG2_PB_assemblyticsPBcR_1921:HG4_Ill_Krunchall_1841:HG3_Ill_Krunchall_1793:HG2_Ill_Krunchall_1764:HG2_PB_HySA_2503:HG4_PB_pbsv_1283:HG3_PB_pbsv_1259:HG2_PB_pbsv_1275:HG4_Ill_MetaSV_394:HG3_Ill_MetaSV_364:HG2_Ill_MetaSV_379:HG4_Ill_manta_313:HG4_Ill_GATKHCSBGrefine_881:HG3_Ill_manta_277:HG3_Ill_GATKHCSBGrefine_871:HG3_10X_allpass_244:HG2_Ill_scalpel_1243:HG2_Ill_manta_360:HG2_Ill_GATKHCSBGrefine_856:HG2_10X_allpass_204:HG3_PB_HySA_1973:HG2_Ill_tnscope_149:HG4_PB_SVrefine2Falcon1Dovetail_810:HG3_PB_SVrefine2PBcRDovetail_693:HG3_PB_SVrefine2Falcon1Dovetail_795:HG2_PB_SVrefine2PBcRplusDovetail_844:HG2_PB_SVrefine2PB10Xhap12_1038:HG2_PB_SVrefine2Falcon2Bionano_388:HG2_PB_SVrefine2Falcon1plusDovetail_876:HG2_Ill_SVrefine2DISCOVARplusDovetail_1024;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_992:HG4_PB_SVrefine2Falcon1Dovetail_810:HG3_PB_SVrefine2PBcRDovetail_693:HG3_PB_SVrefine2Falcon1Dovetail_795:HG2_PB_SVrefine2PBcRplusDovetail_844:HG2_PB_SVrefine2PB10Xhap12_1038:HG2_PB_SVrefine2Falcon2Bionano_388:HG2_PB_SVrefine2Falcon1plusDovetail_876:HG2_Ill_SVrefine2DISCOVARplusDovetail_1024;NumExactMatchSVs=9;ClusterMaxShiftDist=0.116505;ClusterMaxSizeDiff=0.116505;ClusterMaxEditDist=0.116505;PBcalls=16;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=4817;DistForward=44080;DistMin=4817;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:234587198-234587521;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.9839;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=287.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:2:30:1:26:1/1:0:32:1:29:1/1:0:54:0/1:3:14:.:.:.
chr1	234798869	HG2_Ill_scalpel_1247	TTCACTCACCTCGCTCACCTCGCTCACTCACCTCATTCACTCACCTCACTCACCTCACCTCACTCACTCACCTCGCTCACTCACCTCGC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_1284:HG4_Ill_GATKHC_2069:HG4_Ill_GATKHCSBGrefine_882:HG3_Ill_GATKHC_2125:HG2_Ill_GATKHC_2088:HG2_Ill_GATKHCSBGrefine_857:HG2_PB_pbsv_1276:HG3_PB_pbsv_1260:HG4_Ill_svaba_1588:HG4_Ill_scalpel_1203:HG4_Ill_manta_314:HG4_Ill_250bpfermikitraw_1710:HG4_Ill_150bpfermikitraw_1665:HG3_Ill_svaba_1623:HG3_Ill_scalpel_1336:HG3_Ill_150bpfermikitraw_1644:HG2_Ill_svaba_1586:HG2_Ill_scalpel_1247:HG2_Ill_manta_361:HG2_Ill_SpiralSDKrefine_1269:HG2_Ill_250bpfermikitraw_1730:HG2_Ill_150bpfermikitraw_1594:HG2_PB_HySA_2506;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1594:HG2_Ill_250bpfermikitraw_1730:HG2_Ill_SpiralSDKrefine_1269:HG2_Ill_manta_361:HG2_Ill_scalpel_1247:HG2_Ill_svaba_1586:HG3_Ill_150bpfermikitraw_1644:HG3_Ill_scalpel_1336:HG3_Ill_svaba_1623:HG4_Ill_150bpfermikitraw_1665:HG4_Ill_250bpfermikitraw_1710:HG4_Ill_manta_314:HG4_Ill_scalpel_1203:HG4_Ill_svaba_1588;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0930233;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.151163;PBcalls=4;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-88;DistBack=12008;DistForward=-36;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=349;REFWIDENED=1:234798746-234799182;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=288.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:12:40:1/1:4:20:3:11:./.:0:11:2:20:1/1:0:11:./.:.:.:.:.:.
chr1	236054575	HG3_Ill_manta_279	TTTGCCAACATTTTTTCTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_1937:HG3_PB_pbsv_1269:HG3_Ill_Krunchall_1807:HG2_Ill_Krunchall_1778:HG3_PB_HySA_1990:HG2_PB_pbsv_1284:HG2_PB_SVrefine2PB10Xhap12_1048:HG4_PB_assemblyticsfalcon_1878:HG4_PB_SVrefine2Falcon1Dovetail_818:HG3_PB_SVrefine2PBcRDovetail_700:HG3_Ill_manta_279:HG3_Ill_GATKHCSBGrefine_875:HG3_10X_allpass_245:HG2_PB_SVrefine2Falcon1plusDovetail_884:HG2_Ill_manta_363:HG2_Ill_breakscan11_154:HG2_Ill_SVrefine2DISCOVARplusDovetail_1030:HG2_Ill_GATKHCSBGrefine_861:HG2_10X_allpass_205:HG2_10X_SVrefine210Xhap12_1000:HG3_Ill_MetaSV_367:HG2_Ill_tnscope_150:HG2_Ill_MetaSV_382:HG3_PB_SVrefine2Falcon1Dovetail_803:HG3_PB_assemblyticsfalcon_1925:HG2_PB_SVrefine2PBcRplusDovetail_851:HG2_PB_SVrefine2PB10Xhap12_1047;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1000:HG2_10X_allpass_205:HG2_Ill_GATKHCSBGrefine_861:HG2_Ill_SVrefine2DISCOVARplusDovetail_1030:HG2_Ill_breakscan11_154:HG2_Ill_manta_363:HG2_PB_SVrefine2Falcon1plusDovetail_884:HG3_10X_allpass_245:HG3_Ill_GATKHCSBGrefine_875:HG3_Ill_manta_279:HG3_PB_SVrefine2PBcRDovetail_700:HG4_PB_SVrefine2Falcon1Dovetail_818:HG4_PB_assemblyticsfalcon_1878;NumExactMatchSVs=13;ClusterMaxShiftDist=0.248217;ClusterMaxSizeDiff=0.248217;ClusterMaxEditDist=0.280053;PBcalls=13;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-338;DistBack=3151;DistForward=-116;DistMin=-116;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:236054576-236054929;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=289.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:0|1:20:0:0:21:0|1:33:0:0:36:0/1:38:30:0/1:34:7:.:.:.
chr1	236594925	HG2_PB_SVrefine2PBcRplusDovetail_858	TAAGACCCCAGGCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_1405:HG2_PB_HySA_2530:HG4_Ill_Krunchall_1868:HG3_Ill_Krunchall_1815:HG2_PB_pbsv_1294:HG2_Ill_Krunchall_1784:HG3_PB_assemblyticsfalcon_1934:HG2_PB_assemblyticsPBcR_1944:HG2_PB_assemblyticsfalcon_1956:HG3_PB_pbsv_1275:HG4_Ill_MetaSV_400:HG3_PB_HySA_2002:HG3_Ill_MetaSV_369:HG2_Ill_tnscope_152:HG2_Ill_MetaSV_385:HG4_PB_pbsv_1310:HG4_PB_SVrefine2Falcon1Dovetail_824:HG4_Ill_manta_318:HG4_Ill_GATKHCSBGrefine_895:HG4_10X_allpass_223:HG3_PB_SVrefine2PBcRDovetail_704:HG3_PB_SVrefine2Falcon1Dovetail_807:HG3_Ill_scalpel_1350:HG3_Ill_manta_280:HG3_Ill_SVrefine2DISCOVARDovetail_921:HG3_Ill_GATKHCSBGrefine_877:HG3_10X_allpass_247:HG2_PB_SVrefine2PBcRplusDovetail_858:HG2_PB_SVrefine2PB10Xhap12_1056:HG2_PB_SVrefine2Falcon2Bionano_398:HG2_PB_SVrefine2Falcon1plusDovetail_890:HG2_Ill_manta_364:HG2_Ill_GATKHCSBGrefine_864:HG2_10X_allpass_207:HG2_10X_SVrefine210Xhap12_1002:HG2_Ill_breakscan11_156;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1002:HG2_10X_allpass_207:HG2_Ill_GATKHCSBGrefine_864:HG2_Ill_manta_364:HG2_PB_SVrefine2Falcon1plusDovetail_890:HG2_PB_SVrefine2Falcon2Bionano_398:HG2_PB_SVrefine2PB10Xhap12_1056:HG2_PB_SVrefine2PBcRplusDovetail_858:HG3_10X_allpass_247:HG3_Ill_GATKHCSBGrefine_877:HG3_Ill_SVrefine2DISCOVARDovetail_921:HG3_Ill_manta_280:HG3_Ill_scalpel_1350:HG3_PB_SVrefine2Falcon1Dovetail_807:HG3_PB_SVrefine2PBcRDovetail_704:HG4_10X_allpass_223:HG4_Ill_GATKHCSBGrefine_895:HG4_Ill_manta_318:HG4_PB_SVrefine2Falcon1Dovetail_824:HG4_PB_pbsv_1310;NumExactMatchSVs=20;ClusterMaxShiftDist=0.084507;ClusterMaxSizeDiff=0.084507;ClusterMaxEditDist=0.084507;PBcalls=15;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-222;DistForward=-325;DistMin=-325;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=1:236594926-236595264;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=290.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:19:0|1:27:1:3:27:0|1:41:1:0:11:0/1:25:22:0/1:22:6:.:.:.
chr1	236656796	HG2_Ill_250bpfermikitraw_1743	GTATGGGTGTACATATGTACATGTGTATGGGTGTACATATGTACATATGTGTATGGGTGTACATATGTACATATGTA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_1311:HG4_Ill_svaba_1608:HG4_Ill_Krunchall_1870:HG4_Ill_GATKHC_2095:HG4_Ill_GATKHCSBGrefine_896:HG4_Ill_250bpfermikitraw_1727:HG4_Ill_150bpfermikitraw_1687:HG3_Ill_svaba_1637:HG3_Ill_Krunchall_1816:HG3_Ill_GATKHC_2150:HG3_Ill_GATKHCSBGrefine_878:HG3_Ill_250bpfermikitraw_1738:HG3_Ill_150bpfermikitraw_1661:HG2_Ill_svaba_1598:HG2_Ill_Krunchall_1785:HG2_Ill_GATKHC_2111:HG2_Ill_GATKHCSBGrefine_865:HG2_Ill_250bpfermikitraw_1743:HG2_Ill_150bpfermikitraw_1609:HG2_PB_pbsv_1295:HG3_PB_pbsv_1276;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1609:HG2_Ill_250bpfermikitraw_1743:HG2_Ill_GATKHCSBGrefine_865:HG2_Ill_GATKHC_2111:HG2_Ill_Krunchall_1785:HG2_Ill_svaba_1598:HG3_Ill_150bpfermikitraw_1661:HG3_Ill_250bpfermikitraw_1738:HG3_Ill_GATKHCSBGrefine_878:HG3_Ill_GATKHC_2150:HG3_Ill_Krunchall_1816:HG3_Ill_svaba_1637:HG4_Ill_150bpfermikitraw_1687:HG4_Ill_250bpfermikitraw_1727:HG4_Ill_GATKHCSBGrefine_896:HG4_Ill_GATKHC_2095:HG4_Ill_Krunchall_1870:HG4_Ill_svaba_1608;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0397351;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.0529801;PBcalls=3;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-76;DistBack=-99;DistForward=-53;DistMin=-99;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=234;REFWIDENED=1:236656710-236657019;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=291.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:27:0|1:15:3:2:24:1|0:1:24:45:1:0/1:24:25:./.:.:.:.:.:.
chr1	237772285	HG2_PB_SVrefine2PB10Xhap12_1063	TTCTTTCTCTCTTCTTCTCTTCTCCCTCTCCCTCCCTCCTTCCCTCCCTCCCTTCCTTCCTTCCTTGTCCCTGTCCCTTTTCTTTCTTGCTGACAGTCTCACTCTGTCACCCAGGCTAGAGTGCACTGATGTGATCTCAGCTCACTACAACCTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1010:HG2_PB_HySA_2551:HG3_PB_HySA_2021:HG3_PB_pbsv_1286:HG4_Ill_GATKHCSBGrefine_906:HG3_Ill_GATKHCSBGrefine_888:HG3_10X_allpass_250:HG2_Ill_GATKHCSBGrefine_877:HG2_PB_pbsv_1306:HG4_PB_pbsv_1323:HG2_PB_SVrefine2PBcRplusDovetail_864:HG2_PB_SVrefine2PB10Xhap12_1063:HG2_PB_SVrefine2Falcon2Bionano_406:HG2_PB_SVrefine2Falcon1plusDovetail_899:HG2_Ill_SVrefine2DISCOVARplusDovetail_1041;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1010:HG2_PB_SVrefine2PBcRplusDovetail_864:HG2_PB_SVrefine2PB10Xhap12_1063:HG2_PB_SVrefine2Falcon2Bionano_406:HG2_PB_SVrefine2Falcon1plusDovetail_899:HG2_Ill_SVrefine2DISCOVARplusDovetail_1041;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0927152;ClusterMaxSizeDiff=0.0927152;ClusterMaxEditDist=0.214765;PBcalls=9;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-153;DistBack=12342;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=316;REFWIDENED=1:237772286-237772754;PctSeqSimilarity=0.9333;PctSizeSimilarity=0.9808;PctRecOverlap=0.1847;SizeDiff=-3;StartDistance=-125;EndDistance=-128;GTMatch=0;TruScore=69;MatchId=292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:38:1/1:5:16:0:13:0/0:19:0:29:1:0/0:21:0:./.:.:.:.:.:.
chr1	238852307	HG2_Ill_GATKHCSBGrefine_879	TAAAAAAACTAGTTTTTTTTTTTTTTTTTTTTAGAGGGTGTTTCTTTTTTTTTTTTTTTTTAATGTTTTTTTTTTTGTTATCATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAAC	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_1424:HG2_PB_assemblyticsPBcR_1973:HG3_10X_allpass_251:HG2_Ill_Krunchall_1817:HG2_10X_allpass_208:HG2_PB_assemblyticsfalcon_1991:HG3_PB_pbsv_1289:HG2_Ill_tnscope_153:HG3_Ill_manta_285:HG3_Ill_MetaSV_373:HG3_Ill_GATKHCSBGrefine_890:HG2_PB_pbsv_1309:HG2_PB_SVrefine2PBcRplusDovetail_867:HG2_PB_SVrefine2Falcon2Bionano_409:HG2_PB_SVrefine2Falcon1plusDovetail_903:HG2_Ill_manta_370:HG2_Ill_SVrefine2DISCOVARplusDovetail_1045:HG2_Ill_MetaSV_390:HG2_Ill_GATKHCSBGrefine_879:HG2_10X_SVrefine210Xhap12_1014:HG2_PB_SVrefine2PB10Xhap12_1068;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1014:HG2_Ill_GATKHCSBGrefine_879:HG2_Ill_MetaSV_390:HG2_Ill_SVrefine2DISCOVARplusDovetail_1045:HG2_Ill_manta_370:HG2_PB_SVrefine2Falcon1plusDovetail_903:HG2_PB_SVrefine2Falcon2Bionano_409:HG2_PB_SVrefine2PBcRplusDovetail_867:HG2_PB_pbsv_1309:HG3_Ill_GATKHCSBGrefine_890:HG3_Ill_MetaSV_373:HG3_Ill_manta_285;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0309333;ClusterMaxSizeDiff=0.0309333;ClusterMaxEditDist=0.0309333;PBcalls=8;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-943;DistBack=-322;DistForward=-931;DistMin=-931;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:238852308-238853265;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=293.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:40:0|1:31:0:2:38:0|1:57:0:0:40:0/1:32:19:0/1:73:34:.:.:.
chr1	240302570	HG4_Ill_GATKHC_2153	CACTGTGTGTAAAATTCACAATGAGGAGCAGGTTGTGGGGATGATTGGTTCAATTAAAATCCTACTGAATTTGAGGATACCTCTTTAAATATAT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_1295:HG4_PB_pbsv_1337:HG2_PB_assemblyticsPBcR_1991:HG2_PB_SVrefine2PBcRplusDovetail_872:HG2_PB_SVrefine2PB10Xhap12_1075:HG2_PB_HySA_2580:HG4_Ill_svaba_1658:HG4_Ill_scalpel_1244:HG4_Ill_manta_322:HG4_Ill_Krunchall_1918:HG4_Ill_GATKHC_2153:HG4_Ill_GATKHCSBGrefine_914:HG4_Ill_Cortex_288:HG4_Ill_250bpfermikitraw_1773:HG4_Ill_150bpfermikitraw_1727:HG4_CG_vcfBeta_917:HG4_10X_allpass_226:HG3_PB_assemblyticsfalcon_1979:HG3_PB_SVrefine2PBcRDovetail_714:HG3_PB_SVrefine2Falcon1Dovetail_822:HG3_PB_HySA_2049:HG3_Ill_svaba_1674:HG3_Ill_scalpel_1376:HG3_Ill_Krunchall_1860:HG3_Ill_GATKHC_2205:HG3_Ill_GATKHCSBGrefine_891:HG3_Ill_Cortex_300:HG3_Ill_250bpfermikitraw_1779:HG3_CG_vcfBeta_789:HG3_10X_allpass_253:HG2_PB_SVrefine2PB10Xhap12_1074:HG2_PB_SVrefine2Falcon2Bionano_414:HG2_Ill_svaba_1637:HG2_Ill_scalpel_1284:HG2_Ill_breakscan11_157:HG2_Ill_SpiralSDKrefine_1302:HG2_Ill_SVrefine2DISCOVARplusDovetail_1053:HG2_Ill_Krunchall_1831:HG2_Ill_GATKHC_2161:HG2_Ill_GATKHCSBGrefine_883:HG2_Ill_Cortex_617:HG2_Ill_250bpfermikitraw_1791:HG2_CG_vcfBeta_812:HG2_10X_allpass_210:HG2_10X_SVrefine210Xhap12_1018:HG2_PB_pbsv_1317;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1018:HG2_10X_allpass_210:HG2_CG_vcfBeta_812:HG2_Ill_250bpfermikitraw_1791:HG2_Ill_Cortex_617:HG2_Ill_GATKHCSBGrefine_883:HG2_Ill_GATKHC_2161:HG2_Ill_Krunchall_1831:HG2_Ill_SVrefine2DISCOVARplusDovetail_1053:HG2_Ill_SpiralSDKrefine_1302:HG2_Ill_breakscan11_157:HG2_Ill_scalpel_1284:HG2_Ill_svaba_1637:HG2_PB_SVrefine2Falcon2Bionano_414:HG2_PB_SVrefine2PB10Xhap12_1074:HG3_10X_allpass_253:HG3_CG_vcfBeta_789:HG3_Ill_250bpfermikitraw_1779:HG3_Ill_Cortex_300:HG3_Ill_GATKHCSBGrefine_891:HG3_Ill_GATKHC_2205:HG3_Ill_Krunchall_1860:HG3_Ill_scalpel_1376:HG3_Ill_svaba_1674:HG3_PB_HySA_2049:HG3_PB_SVrefine2Falcon1Dovetail_822:HG3_PB_SVrefine2PBcRDovetail_714:HG3_PB_assemblyticsfalcon_1979:HG4_10X_allpass_226:HG4_CG_vcfBeta_917:HG4_Ill_150bpfermikitraw_1727:HG4_Ill_250bpfermikitraw_1773:HG4_Ill_Cortex_288:HG4_Ill_GATKHCSBGrefine_914:HG4_Ill_GATKHC_2153:HG4_Ill_Krunchall_1918:HG4_Ill_manta_322:HG4_Ill_scalpel_1244:HG4_Ill_svaba_1658;NumExactMatchSVs=39;ClusterMaxShiftDist=0.0659341;ClusterMaxSizeDiff=0.0659341;ClusterMaxEditDist=0.110497;PBcalls=13;Illcalls=26;TenXcalls=4;CGcalls=3;PBexactcalls=6;Illexactcalls=26;TenXexactcalls=4;CGexactcalls=3;HG2count=20;HG3count=14;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-93;DistBack=55973;DistForward=3111;DistMin=3111;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:240302571-240302665;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=294.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:29:./.:20:8:3:19:1|0:0:24:40:0:0/1:24:16:./.:.:.:.:.:.
chr1	240393000	HG2_PB_SVrefine2Falcon1plusDovetail_910	CCAGTGGCATGATCTCAGCTCACTGCAGCCTCTGCCTCCCCGGTTCCAGCGATTCTCCTGCCTCAGCCTCCTGGGTAGCTGGGATTACAGGCATGCACCACCATGCCCAGCTAATTTTTGTATTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTGCTGACCTCAGGTAATCCACTCACCTCAGCCTCCCAAAGTGCTAGGATTACAGGTATGAGCCACCGTGCCCAGCAGAAAAGTATCTTTGAAATATCAAGTTTTAGTAAACACATTTTAAGAAACTGTAGTATAAACCTTGCTAACCAAAAATTTATAGAAGAGAGGCCGGCGCAGTGGTTCATGCCTATAATCCCAGCCTTTTGGGAGGCTGAGGTGGCAGGATCACTTGAACCCAGAAGTTTGAGACCAGCCTGGGAAACACAATGAGACCACGTCTCTACAAAAAAATACAAAAATTAGTTGGGCATGGTGGCATGTGCCTGTAGCCCCACCTACTCCCAGCTGCTTGAGAGGCTGAGGCAGGAGGATCGCTTAAGCCCAGGAGGTCAAGGCTGCAGTGAGCCGAGATCAAGCCACTGCACTCCAGCCTGGGCAAGAGAGTCAGACCCTGTCTGAAAAACAACAACAACAACAAAAAAACTAACCCAATAGCTTATAGAAAAGAAAGAGAATAGTGTAAATGAAGTTAAAATGAGAGCAGGAAGAGCTGACGTCCCCTAAAGCTTTGATGCCACCTAAAGTATTTCTGTTTTTTCCTATTTTTTCTCAGAGAGCCATAAAAAAATTTTGTTTTGAGGTGTGTATTAGTAGGAATGTAGGCAAGGCTTTTCTTTAATTGATCCATGTGTTAATCTTTATGTATAGTTCTGTGTATTTTTCTATATGGATTGTAATGTTGCCATTAAAACTTTTTACAAAACATGTATAGGTCACTCTTTAAATTTCCTTAGCTGTAAATATAGTACAGAATGACTCCTTTTCTCTTTTAATACTCTCCTGTATAATGTTGTTGGTGTTTTTACTTGCAGCTCCTTTTACTAACATTTTGTGTACTTAATTACCCCTGTAAGTAAAGCTTTTCATAATTAGGATGGAATTTTGCCTGCTTTTTTCTAGTGCCAACAAAAGAAACTAGCATGTTCTTCATGCTAGAAGCTAGAATCTGAGTTGAAATCCACTTGCAGCTGAGTGCTTTTTAAATGATCAGCTTTTCTTCAATGGCCTAGATCGGCACAAGGCTCCATAGAAATTGGCTTTGAGTTGGTCTCCATCCTTTGAACTGGCAAGGAAAGACACAGTAACTTGTTTTGTTTTGAAAGCTAGATTGCAGTATTCCCCCAGTGATGCCAGACTGACTTGGCTGTTGTGTTGTAAGTAAAAACTTTCCTATTCCAGTAATGCCAGCCTTCTTCTCAATACTGCCACACACGAAGCAGGTAGACACACAGCTATTCCAAAAACAAGAAAACAAAACAAAAAACTCTCTAATTTGACCATCTCTTTGCGTTCCACATTAAGCCTTCCAAAAAATAAAACAATACAAACTTGCCAAATATAAGACCAAAACAAAGCTTTTTCTTTTTAAAATGATTGAAAATGTATTTCGCTATGTTTCTACCAATGTGAACAAAGCTTGACTGTATTAAAAAATCTGATCATTATAAAATGCAGATGAAGAAGATCAAATGGCAAGGTGGTTTCAGTTTATTCTGAATATTTTAGTGACAGAAAGTTGAACAGGAAGGAAACAGGTGTTAGTGTAAAATACAC	TTCT	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_1351:HG4_Ill_GATKHCSBGrefine_918:HG2_PB_pbsv_1320:HG4_PB_pbsv_1340:HG2_Ill_tnscope_154:HG4_PB_assemblyticsfalcon_1929:HG4_PB_SVrefine2PBcRDovetail_728:HG4_PB_SVrefine2Falcon1Dovetail_838:HG4_Ill_SVrefine2DISCOVARDovetail_990:HG3_PB_assemblyticsfalcon_1984:HG3_PB_SVrefine2Falcon1Dovetail_824:HG2_PB_assemblyticsfalcon_2009:HG2_PB_SVrefine2PB10Xhap12_1077:HG2_PB_SVrefine2Falcon2Bionano_416:HG2_PB_SVrefine2Falcon1plusDovetail_910:HG2_Ill_SVrefine2DISCOVARplusDovetail_1054:HG2_10X_SVrefine210Xhap12_1019:HG2_Ill_SpiralSDKrefine_1303:HG4_PB_HySA_2026:HG4_10X_allpass_227:HG2_Ill_MetaSV_391:HG2_10X_allpass_211:HG4_Ill_MetaSV_408:HG4_Ill_Krunchall_1921:HG2_Ill_Krunchall_1834;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1019:HG2_Ill_SVrefine2DISCOVARplusDovetail_1054:HG2_PB_SVrefine2Falcon1plusDovetail_910:HG2_PB_SVrefine2Falcon2Bionano_416:HG2_PB_SVrefine2PB10Xhap12_1077:HG2_PB_assemblyticsfalcon_2009:HG3_PB_SVrefine2Falcon1Dovetail_824:HG3_PB_assemblyticsfalcon_1984:HG4_Ill_SVrefine2DISCOVARDovetail_990:HG4_PB_SVrefine2Falcon1Dovetail_838:HG4_PB_SVrefine2PBcRDovetail_728:HG4_PB_assemblyticsfalcon_1929;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0341297;ClusterMaxSizeDiff=0.0341297;ClusterMaxEditDist=0.0341297;PBcalls=13;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-1779;DistBack=-52;DistForward=-1783;DistMin=-1783;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:240393000-240394782;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=295.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:14:./.:26:2:4:12:1|0:0:30:54:0:0/1:73:19:0/1:175:62:.:.:.
chr1	240528536	HG3_PB_assemblyticsfalcon_1985	TACACATATACATACATACATACGTGTGCATATATATACATACATATGTGTGTGTATATATATACACACAGACACACATATATATAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1020:HG2_PB_HySA_2589:HG4_PB_assemblyticsfalcon_1931:HG3_PB_assemblyticsfalcon_1985:HG3_Ill_svaba_1676:HG3_Ill_manta_286:HG3_Ill_Krunchall_1863:HG3_Ill_GATKHC_2210:HG3_Ill_GATKHCSBGrefine_893:HG3_Ill_250bpfermikitraw_1783:HG2_PB_assemblyticsfalcon_2010:HG2_PB_assemblyticsPBcR_1998:HG2_Ill_svaba_1640:HG2_Ill_Krunchall_1835:HG2_Ill_GATKHC_2166:HG2_Ill_GATKHCSBGrefine_886:HG2_Ill_250bpfermikitraw_1795:HG4_PB_pbsv_1341:HG3_PB_pbsv_1299:HG4_PB_HySA_2029:HG2_PB_pbsv_1321:HG3_PB_HySA_2053:HG4_PB_SVrefine2PBcRDovetail_729:HG4_Ill_SVrefine2DISCOVARDovetail_991:HG4_Ill_GATKHCSBGrefine_919:HG4_Ill_250bpfermikitraw_1777:HG4_Ill_150bpfermikitraw_1732:HG3_Ill_SVrefine2DISCOVARDovetail_943:HG3_Ill_GATKHCSBGrefine_892:HG3_Ill_250bpfermikitraw_1782:HG2_Ill_manta_371:HG2_Ill_SpiralSDKrefine_1304:HG2_Ill_GATKHCSBGrefine_885:HG2_Ill_250bpfermikitraw_1794;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1795:HG2_Ill_GATKHCSBGrefine_886:HG2_Ill_GATKHC_2166:HG2_Ill_Krunchall_1835:HG2_Ill_svaba_1640:HG2_PB_assemblyticsPBcR_1998:HG2_PB_assemblyticsfalcon_2010:HG3_Ill_250bpfermikitraw_1783:HG3_Ill_GATKHCSBGrefine_893:HG3_Ill_GATKHC_2210:HG3_Ill_Krunchall_1863:HG3_Ill_manta_286:HG3_Ill_svaba_1676:HG3_PB_assemblyticsfalcon_1985:HG4_PB_assemblyticsfalcon_1931;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0591716;ClusterMaxSizeDiff=0.0591716;ClusterMaxEditDist=0.0591716;PBcalls=11;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-86;DistBack=4073;DistForward=40637;DistMin=4073;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=1:240528535-240528628;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:2:26:0:27:./.:15:5:0:22:./.:5:56:./.:.:.:.:.:.
chr1	240616990	HG4_Ill_manta_323	TAAAAATGGAAGGCATAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAGACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCTGCCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_72:HG3_PB_HySA_2056:HG2_PB_HySA_2592:HG4_PB_pbsv_1342:HG2_PB_pbsv_1322:HG4_Ill_Krunchall_1923:HG2_Ill_Krunchall_1836:HG4_PB_HySA_2032:HG4_Ill_MetaSV_409:HG3_Ill_MetaSV_375:HG2_Ill_tnscope_155:HG2_Ill_MetaSV_392:HG4_PB_assemblyticsfalcon_1932:HG4_PB_SVrefine2PBcRDovetail_730:HG4_PB_SVrefine2Falcon1Dovetail_839:HG4_Ill_svaba_1664:HG4_Ill_scalpel_1248:HG4_Ill_manta_323:HG4_Ill_SVrefine2DISCOVARDovetail_992:HG4_Ill_GATKHCSBGrefine_920:HG4_10X_allpass_228:HG3_PB_assemblyticsfalcon_1987:HG3_PB_SVrefine2PBcRDovetail_717:HG3_PB_SVrefine2Falcon1Dovetail_825:HG3_Ill_svaba_1678:HG3_Ill_scalpel_1378:HG3_Ill_manta_287:HG3_Ill_SVrefine2DISCOVARDovetail_944:HG3_Ill_GATKHCSBGrefine_894:HG3_10X_allpass_254:HG2_PB_assemblyticsfalcon_2012:HG2_PB_assemblyticsPBcR_1999:HG2_PB_SVrefine2PBcRplusDovetail_876:HG2_PB_SVrefine2PB10Xhap12_1078:HG2_PB_SVrefine2Falcon2Bionano_417:HG2_PB_SVrefine2Falcon1plusDovetail_911:HG2_Ill_svaba_1642:HG2_Ill_scalpel_1286:HG2_Ill_manta_372:HG2_Ill_SVrefine2DISCOVARplusDovetail_1058:HG2_Ill_GATKHCSBGrefine_887:HG2_10X_allpass_212:HG2_10X_SVrefine210Xhap12_1022:HG3_PB_pbsv_1300:HG2_Ill_breakscan11_158:HG4_Ill_Spiral_97:HG3_Ill_Spiral_1439;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1022:HG2_10X_allpass_212:HG2_Ill_GATKHCSBGrefine_887:HG2_Ill_SVrefine2DISCOVARplusDovetail_1058:HG2_Ill_manta_372:HG2_Ill_scalpel_1286:HG2_Ill_svaba_1642:HG2_PB_SVrefine2Falcon1plusDovetail_911:HG2_PB_SVrefine2Falcon2Bionano_417:HG2_PB_SVrefine2PB10Xhap12_1078:HG2_PB_SVrefine2PBcRplusDovetail_876:HG2_PB_assemblyticsPBcR_1999:HG2_PB_assemblyticsfalcon_2012:HG3_10X_allpass_254:HG3_Ill_GATKHCSBGrefine_894:HG3_Ill_SVrefine2DISCOVARDovetail_944:HG3_Ill_manta_287:HG3_Ill_scalpel_1378:HG3_Ill_svaba_1678:HG3_PB_SVrefine2Falcon1Dovetail_825:HG3_PB_SVrefine2PBcRDovetail_717:HG3_PB_assemblyticsfalcon_1987:HG4_10X_allpass_228:HG4_Ill_GATKHCSBGrefine_920:HG4_Ill_SVrefine2DISCOVARDovetail_992:HG4_Ill_manta_323:HG4_Ill_scalpel_1248:HG4_Ill_svaba_1664:HG4_PB_SVrefine2Falcon1Dovetail_839:HG4_PB_SVrefine2PBcRDovetail_730:HG4_PB_assemblyticsfalcon_1932;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0123457;ClusterMaxSizeDiff=0.0123457;ClusterMaxEditDist=0.0123839;PBcalls=18;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=2299;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=1:240616991-240617331;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=297.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:70:1/1:0:24:0:26:1/1:0:26:0:25:1/1:0:37:./.:2:11:.:.:.
chr1	240838631	HG2_PB_SVrefine2PBcRplusDovetail_880	CAGGCTGGAGTGCGGTGGCGTCTCAGCTTACTGCAACCTCCACCTCCCGGGTACAAGCAATTCTTGTGCCTCAGCCTCCACACGCCTGTAGTCCCAAGCTACTTAGGAGGCTGAGGCATGAGAATTGCTTGTACCCGGGAGGTGGGGGTTGCAGTGAGCTGAGATGCCACCGCACTCCAGCCTGGGTGATAGAGCGAGACTCTGTCTCCAAAAAAATAAATAAATAAAAATAAAAAATAAAAAGCATGCAGATGCTAGAGTTATTCCACCAAAACAGACCAAGACTGATTGCCTGAAATTAGGTCGGGAAACATTTTATTTCTCTTTTTTAAAAACAATTAATTATTTTTTTAAATGGACACATTGTAATTATGCACATTTATGAAGTACAACTTGATGTTTTGATACATATATATTATGTATAATGATCAAATTAGGGTACTTAGTACGTTCATCATCTCATGCATTTATCATTCCTTTTTTCGTGAGAACATTCAAAAGCCTCTCTTCTAGCTATCTGGTAATATGCTGTCTCTTCTCTCAGTTCCTTTCTTTCTCCCTACACCCAAACAGGGACTCTCAGAGGAGAAGTAGGCAG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_1346:HG2_PB_pbsv_1326:HG2_Ill_tnscope_156:HG4_PB_assemblyticsfalcon_1936:HG4_PB_SVrefine2PBcRDovetail_733:HG4_PB_SVrefine2Falcon1Dovetail_841:HG4_Ill_manta_326:HG4_Ill_MetaSV_411:HG4_Ill_GATKHCSBGrefine_924:HG4_10X_allpass_229:HG3_PB_assemblyticsfalcon_1993:HG3_PB_SVrefine2Falcon1Dovetail_828:HG2_PB_assemblyticsPBcR_2004:HG2_PB_SVrefine2PBcRplusDovetail_880:HG2_Ill_SpiralSDKrefine_1309:HG2_Ill_GATKHCSBGrefine_890:HG2_10X_allpass_213:HG2_10X_SVrefine210Xhap12_1027:HG4_Ill_Spiral_98:HG2_PB_assemblyticsfalcon_2016:HG2_PB_SVrefine2Falcon1plusDovetail_912;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1027:HG2_10X_allpass_213:HG2_Ill_GATKHCSBGrefine_890:HG2_Ill_SpiralSDKrefine_1309:HG2_PB_SVrefine2PBcRplusDovetail_880:HG2_PB_assemblyticsPBcR_2004:HG3_PB_SVrefine2Falcon1Dovetail_828:HG3_PB_assemblyticsfalcon_1993:HG4_10X_allpass_229:HG4_Ill_GATKHCSBGrefine_924:HG4_Ill_MetaSV_411:HG4_Ill_manta_326:HG4_PB_SVrefine2Falcon1Dovetail_841:HG4_PB_SVrefine2PBcRDovetail_733:HG4_PB_assemblyticsfalcon_1936;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00334728;ClusterMaxSizeDiff=0.00334448;ClusterMaxEditDist=0.00502092;PBcalls=11;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-597;DistBack=13833;DistForward=-598;DistMin=-598;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:240838632-240839229;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:38:./.:15:9:7:16:1|0:0:19:40:0:0/1:44:20:0/1:56:18:.:.:.
chr1	241149856	HG3_Ill_GATKHCSBGrefine_897	TTAAACACCACTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_395:HG4_PB_assemblyticsfalcon_1938:HG3_PB_assemblyticsfalcon_1995:HG2_PB_assemblyticsfalcon_2019:HG2_PB_assemblyticsPBcR_2007:HG3_Ill_Krunchall_1869:HG2_Ill_Krunchall_1842:HG2_PB_pbsv_1328:HG4_PB_HySA_2038:HG3_PB_pbsv_1305:HG2_PB_HySA_2600:HG4_PB_pbsv_1348:HG4_PB_SVrefine2PBcRDovetail_734:HG4_PB_SVrefine2Falcon1Dovetail_843:HG4_Ill_svaba_1669:HG4_Ill_manta_327:HG4_Ill_MetaSV_412:HG4_Ill_GATKHCSBGrefine_925:HG4_10X_allpass_230:HG3_PB_SVrefine2PBcRDovetail_719:HG3_PB_SVrefine2Falcon1Dovetail_830:HG3_PB_HySA_2060:HG3_Ill_svaba_1685:HG3_Ill_scalpel_1385:HG3_Ill_manta_289:HG3_Ill_SVrefine2DISCOVARDovetail_947:HG3_Ill_GATKHCSBGrefine_897:HG3_10X_allpass_255:HG2_PB_SVrefine2PBcRplusDovetail_882:HG2_PB_SVrefine2PB10Xhap12_1083:HG2_PB_SVrefine2Falcon2Bionano_419:HG2_PB_SVrefine2Falcon1plusDovetail_914:HG2_Ill_svaba_1649:HG2_Ill_scalpel_1291:HG2_Ill_manta_375:HG2_Ill_SVrefine2DISCOVARplusDovetail_1062:HG2_Ill_GATKHCSBGrefine_891:HG2_10X_allpass_214:HG2_10X_SVrefine210Xhap12_1029:HG2_Ill_breakscan11_159:HG4_Ill_Spiral_99:HG3_Ill_Spiral_1445:HG3_Ill_MetaSV_377:HG2_Ill_tnscope_157:HG2_Ill_Spiral_73;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1029:HG2_10X_allpass_214:HG2_Ill_GATKHCSBGrefine_891:HG2_Ill_SVrefine2DISCOVARplusDovetail_1062:HG2_Ill_manta_375:HG2_Ill_scalpel_1291:HG2_Ill_svaba_1649:HG2_PB_SVrefine2Falcon1plusDovetail_914:HG2_PB_SVrefine2Falcon2Bionano_419:HG2_PB_SVrefine2PB10Xhap12_1083:HG2_PB_SVrefine2PBcRplusDovetail_882:HG3_10X_allpass_255:HG3_Ill_GATKHCSBGrefine_897:HG3_Ill_SVrefine2DISCOVARDovetail_947:HG3_Ill_manta_289:HG3_Ill_scalpel_1385:HG3_Ill_svaba_1685:HG3_PB_HySA_2060:HG3_PB_SVrefine2Falcon1Dovetail_830:HG3_PB_SVrefine2PBcRDovetail_719:HG4_10X_allpass_230:HG4_Ill_GATKHCSBGrefine_925:HG4_Ill_MetaSV_412:HG4_Ill_manta_327:HG4_Ill_svaba_1669:HG4_PB_SVrefine2Falcon1Dovetail_843:HG4_PB_SVrefine2PBcRDovetail_734;NumExactMatchSVs=27;ClusterMaxShiftDist=0.103937;ClusterMaxSizeDiff=0.103937;ClusterMaxEditDist=0.103937;PBcalls=18;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=26338;DistForward=15091;DistMin=15091;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=1:241149857-241150198;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:0:56:0:13:1/1:0:13:0:24:1/1:0:52:./.:1:15:.:.:.
chr1	241186304	HG4_PB_SVrefine2Falcon1Dovetail_844	ATGTAAAATAACAACTATGAGATATAGTTGTTATAATGATTAAATAGGTAAAATTGTGTAGAATAACAACTACAGATATAGTTGTTATAGTTAAATGAATAAAATCATGTAAAATTTACAATCG	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_831:HG4_Ill_Krunchall_1927:HG2_Ill_Krunchall_1843:HG4_PB_assemblyticsfalcon_1939:HG4_PB_HySA_2039:HG2_PB_pbsv_1329:HG4_PB_pbsv_1349:HG4_Ill_MetaSV_413:HG4_PB_SVrefine2PBcRDovetail_735:HG4_PB_SVrefine2Falcon1Dovetail_844:HG4_Ill_svaba_1670:HG4_Ill_scalpel_1249:HG4_Ill_SVrefine2DISCOVARDovetail_995:HG4_Ill_GATKHC_2165:HG4_Ill_GATKHCSBGrefine_926:HG4_10X_allpass_231:HG2_Ill_svaba_1650:HG2_Ill_manta_376:HG2_Ill_SpiralSDKrefine_1310:HG2_Ill_SVrefine2DISCOVARplusDovetail_1063:HG2_Ill_MetaSV_396:HG2_Ill_GATKHC_2173:HG2_Ill_GATKHCSBGrefine_892:HG2_10X_SVrefine210Xhap12_1030;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1030:HG2_Ill_GATKHCSBGrefine_892:HG2_Ill_GATKHC_2173:HG2_Ill_MetaSV_396:HG2_Ill_SVrefine2DISCOVARplusDovetail_1063:HG2_Ill_SpiralSDKrefine_1310:HG2_Ill_manta_376:HG2_Ill_svaba_1650:HG4_10X_allpass_231:HG4_Ill_GATKHCSBGrefine_926:HG4_Ill_GATKHC_2165:HG4_Ill_SVrefine2DISCOVARDovetail_995:HG4_Ill_scalpel_1249:HG4_Ill_svaba_1670:HG4_PB_SVrefine2Falcon1Dovetail_844:HG4_PB_SVrefine2PBcRDovetail_735;NumExactMatchSVs=16;ClusterMaxShiftDist=0.016129;ClusterMaxSizeDiff=0.016129;ClusterMaxEditDist=0.0487805;PBcalls=7;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-123;DistBack=21030;DistForward=-61;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=68;REFWIDENED=1:241186300-241186490;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:16:0|1:37:1:0:15:1|0:0:19:39:0:0/1:33:23:./.:.:.:.:.:.
chr1	241360537	HG2_Ill_SVrefine2DISCOVARplusDovetail_1065	ACTAATCAAAGTATCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1031:HG4_Ill_Krunchall_1931:HG2_Ill_Krunchall_1847:HG4_PB_assemblyticsfalcon_1943:HG3_PB_assemblyticsfalcon_1997:HG2_PB_assemblyticsfalcon_2021:HG2_PB_assemblyticsPBcR_2009:HG2_PB_pbsv_1330:HG4_PB_HySA_2043:HG3_PB_HySA_2062:HG2_PB_HySA_2603:HG4_Ill_MetaSV_414:HG3_Ill_MetaSV_378:HG2_Ill_tnscope_158:HG2_Ill_MetaSV_397:HG4_PB_pbsv_1353:HG4_PB_SVrefine2PBcRDovetail_737:HG4_PB_SVrefine2Falcon1Dovetail_845:HG4_Ill_scalpel_1253:HG4_Ill_manta_328:HG4_Ill_SVrefine2DISCOVARDovetail_997:HG4_Ill_GATKHCSBGrefine_927:HG4_10X_allpass_232:HG3_PB_pbsv_1306:HG3_PB_SVrefine2PBcRDovetail_720:HG3_PB_SVrefine2Falcon1Dovetail_832:HG3_Ill_scalpel_1387:HG3_Ill_manta_290:HG3_Ill_SVrefine2DISCOVARDovetail_948:HG3_Ill_GATKHCSBGrefine_898:HG3_10X_allpass_256:HG2_PB_SVrefine2PBcRplusDovetail_883:HG2_PB_SVrefine2PB10Xhap12_1084:HG2_PB_SVrefine2Falcon2Bionano_420:HG2_PB_SVrefine2Falcon1plusDovetail_915:HG2_Ill_scalpel_1294:HG2_Ill_manta_377:HG2_Ill_SVrefine2DISCOVARplusDovetail_1065:HG2_Ill_GATKHCSBGrefine_893:HG2_10X_allpass_215;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1031:HG4_PB_pbsv_1353:HG4_PB_SVrefine2PBcRDovetail_737:HG4_PB_SVrefine2Falcon1Dovetail_845:HG4_Ill_scalpel_1253:HG4_Ill_manta_328:HG4_Ill_SVrefine2DISCOVARDovetail_997:HG4_Ill_GATKHCSBGrefine_927:HG4_10X_allpass_232:HG3_PB_pbsv_1306:HG3_PB_SVrefine2PBcRDovetail_720:HG3_PB_SVrefine2Falcon1Dovetail_832:HG3_Ill_scalpel_1387:HG3_Ill_manta_290:HG3_Ill_SVrefine2DISCOVARDovetail_948:HG3_Ill_GATKHCSBGrefine_898:HG3_10X_allpass_256:HG2_PB_SVrefine2PBcRplusDovetail_883:HG2_PB_SVrefine2PB10Xhap12_1084:HG2_PB_SVrefine2Falcon2Bionano_420:HG2_PB_SVrefine2Falcon1plusDovetail_915:HG2_Ill_scalpel_1294:HG2_Ill_manta_377:HG2_Ill_SVrefine2DISCOVARplusDovetail_1065:HG2_Ill_GATKHCSBGrefine_893:HG2_10X_allpass_215;NumExactMatchSVs=26;ClusterMaxShiftDist=0.100324;ClusterMaxSizeDiff=0.100324;ClusterMaxEditDist=0.100324;PBcalls=18;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=9016;DistForward=-300;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=1:241360538-241360868;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=301.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:71:1/1:1:28:2:42:1/1:0:20:0:26:1/1:0:20:0/1:2:8:.:.:.
chr1	241586225	HG3_Ill_SVrefine2DISCOVARDovetail_949	GGCTAATTTTTTTTTTTAATATAGAGATGGGGTTTCACTGTATTGCCAGGCTGGTGGCAAACTCCTGGGCTCAAGCGATTCCTCTGCCTTAATTTACCAAAGTGCTGAGATTACAGGTGTGAGCCACCAAGCCCAATGCTTTTGTTTTATCGATTTTGTTTTAGCATTAAATTCTAATAAACTTTTTCATTATGAAAATATTCAGGCATGCATAAATGTAGGAGAATTAGTAGGATGGGCCCTGTCATAAATCAGCCAGCTTCA	G	20	PASS	ClusterIDs=HG2_PB_HySA_2606:HG3_PB_HySA_2067:HG2_Ill_Krunchall_1851:HG2_PB_assemblyticsPBcR_2015:HG3_Ill_Krunchall_1874:HG3_PB_pbsv_1308:HG3_PB_SVrefine2PBcRDovetail_721:HG3_Ill_scalpel_1391:HG3_Ill_manta_291:HG3_Ill_SVrefine2DISCOVARDovetail_949:HG3_Ill_GATKHCSBGrefine_899:HG3_10X_allpass_257:HG2_PB_pbsv_1331:HG2_PB_SVrefine2PBcRplusDovetail_884:HG2_PB_SVrefine2PB10Xhap12_1085:HG2_PB_SVrefine2Falcon2Bionano_421:HG2_PB_SVrefine2Falcon1plusDovetail_916:HG2_Ill_breakscan11_160:HG2_Ill_SpiralSDKrefine_1312:HG2_Ill_MetaSV_398:HG2_Ill_GATKHCSBGrefine_894:HG2_10X_SVrefine210Xhap12_1032:HG4_PB_assemblyticsfalcon_1947:HG4_PB_SVrefine2Falcon1Dovetail_846:HG3_PB_assemblyticsfalcon_2002:HG3_PB_SVrefine2Falcon1Dovetail_833;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1032:HG2_Ill_GATKHCSBGrefine_894:HG2_Ill_MetaSV_398:HG2_Ill_SpiralSDKrefine_1312:HG2_Ill_breakscan11_160:HG2_PB_SVrefine2Falcon1plusDovetail_916:HG2_PB_SVrefine2Falcon2Bionano_421:HG2_PB_SVrefine2PB10Xhap12_1085:HG2_PB_SVrefine2PBcRplusDovetail_884:HG2_PB_pbsv_1331:HG3_10X_allpass_257:HG3_Ill_GATKHCSBGrefine_899:HG3_Ill_SVrefine2DISCOVARDovetail_949:HG3_Ill_manta_291:HG3_Ill_scalpel_1391:HG3_PB_SVrefine2PBcRDovetail_721:HG3_PB_pbsv_1308;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0113852;ClusterMaxSizeDiff=0.0113852;ClusterMaxEditDist=0.0113852;PBcalls=14;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-263;DistBack=59140;DistForward=-264;DistMin=-264;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:241586226-241586490;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=302.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:23:0|1:18:1:0:26:0|1:65:0:0:25:0/1:44:17:./.:.:.:.:.:.
chr1	241691690	HG2_10X_SVrefine210Xhap12_1033	GGAAAATATATACATTAATTTCAGAATATATATATATATAATATATATATATTCTGAAATACTTGAATATATATATATTTCAAGTACACACAAAGCATTTACACAAATTTACCACTTTATGGCCATACAATGAGTCTTAACCCGTTTCACATGTTTGAAAATCTATAGCACATATTAGCTGGCCTCACTGGAATTTTGCTAAAAACCAATAACAATAAGAAAACTAGGATGTGCCATGCATTTGGAACTTAAGAAATAAACCTGTATTCCACCCTGTACTGGAGGTACTAGCCAGCATGGAAAGAATCATTCAATCAGTCAGTAGCAGGGGGAGAGAGAGAGAGAGAGAGAGAGA	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_399:HG2_PB_PB10Xdip_1363:HG2_10X_allpass_216:HG3_Ill_Krunchall_1876:HG2_Ill_Krunchall_1853:HG2_PB_assemblyticsfalcon_2025:HG2_PB_assemblyticsPBcR_2016:HG3_Ill_manta_292:HG3_Ill_SVrefine2DISCOVARDovetail_950:HG3_Ill_GATKHCSBGrefine_900:HG3_10X_allpass_258:HG2_PB_SVrefine2Falcon2Bionano_423:HG2_PB_SVrefine2Falcon1plusDovetail_918:HG2_Ill_manta_378:HG2_Ill_SpiralSDKrefine_1313:HG2_Ill_SVrefine2DISCOVARplusDovetail_1066:HG2_10X_SVrefine210Xhap12_1033:HG3_PB_pbsv_1310:HG2_PB_SVrefine2PBcRplusDovetail_885:HG2_PB_pbsv_1333:HG2_PB_SVrefine2PB10Xhap12_1086:HG3_PB_SVrefine2PBcRDovetail_723:HG3_Ill_MetaSV_380:HG2_Ill_tnscope_159;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1033:HG2_Ill_SVrefine2DISCOVARplusDovetail_1066:HG2_Ill_SpiralSDKrefine_1313:HG2_Ill_manta_378:HG2_PB_SVrefine2Falcon1plusDovetail_918:HG2_PB_SVrefine2Falcon2Bionano_423:HG3_10X_allpass_258:HG3_Ill_GATKHCSBGrefine_900:HG3_Ill_SVrefine2DISCOVARDovetail_950:HG3_Ill_manta_292;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0336606;ClusterMaxSizeDiff=0.0336606;ClusterMaxEditDist=0.0336606;PBcalls=10;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-354;DistBack=29673;DistForward=-353;DistMin=-353;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:241691691-241692046;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=303.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:45:0|1:47:1:2:46:0|1:66:0:0:22:0/1:56:18:0/1:18:6:.:.:.
chr1	241787504	HG2_Ill_GATKHC_2182	TGCTCCAGACACTGTGGACCCTCTTTCACCTGTCCTGCCTCTCCACGCCAGGCCAGGCACTCTAC	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_1949:HG2_Ill_breakscan11_161:HG3_PB_pbsv_1312:HG3_PB_assemblyticsfalcon_2005:HG3_PB_HySA_2074:HG3_Ill_GATKHC_2230:HG3_Ill_GATKHCSBGrefine_901:HG3_Ill_250bpfermikitraw_1798:HG3_Ill_150bpfermikitraw_1719:HG2_Ill_GATKHC_2182:HG2_PB_pbsv_1335;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHC_2182:HG3_Ill_150bpfermikitraw_1719:HG3_Ill_250bpfermikitraw_1798:HG3_Ill_GATKHCSBGrefine_901:HG3_Ill_GATKHC_2230:HG3_PB_HySA_2074:HG3_PB_assemblyticsfalcon_2005;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.124031;PBcalls=5;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-64;DistBack=20;DistForward=48082;DistMin=20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=314;REFWIDENED=1:241787262-241787639;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=304.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:27:./.:24:8:4:14:./.:3:2:0:4:0/1:10:13:./.:.:.:.:.:.
chr1	242357868	HG4_Ill_manta_329	ATATCTATCTATCTATCTATCTATCTATCTATCTATCTATGTATCTATCTATG	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_895:HG4_PB_pbsv_1358:HG4_PB_HySA_2047:HG2_PB_SVrefine2Falcon1plusDovetail_921:HG4_Ill_manta_329:HG4_Ill_Krunchall_1939:HG4_Ill_GATKHC_2178:HG4_Ill_GATKHCSBGrefine_928:HG4_Ill_250bpfermikitraw_1791:HG4_Ill_150bpfermikitraw_1749:HG4_10X_allpass_233:HG2_Ill_Krunchall_1856;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_895:HG4_Ill_manta_329:HG4_Ill_Krunchall_1939:HG4_Ill_GATKHC_2178:HG4_Ill_GATKHCSBGrefine_928:HG4_Ill_250bpfermikitraw_1791:HG4_Ill_150bpfermikitraw_1749:HG4_10X_allpass_233:HG2_Ill_Krunchall_1856;NumExactMatchSVs=9;ClusterMaxShiftDist=0.171429;ClusterMaxSizeDiff=0.171429;ClusterMaxEditDist=0.171429;PBcalls=3;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-52;DistBack=25719;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=68;REFWIDENED=1:242357860-242357979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:12:0|1:26:2:2:9:./.:0:16:11:1:0/1:24:29:./.:.:.:.:.:.
chr1	242860265	HG3_Ill_Krunchall_1895	GGACAGAAGAGTTTGAGATGCCTACTAAACATCCAAATGCTGACACCATGTAGGCAGTTAGACATGTGAGTCTGGAGCTTTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1042:HG3_PB_pbsv_1320:HG3_PB_HySA_2091:HG3_Ill_svaba_1706:HG3_Ill_Krunchall_1895:HG3_Ill_GATKHC_2245:HG3_Ill_GATKHCSBGrefine_906:HG3_Ill_250bpfermikitraw_1810:HG3_Ill_150bpfermikitraw_1735:HG2_Ill_svaba_1670:HG2_Ill_SpiralSDKrefine_1320:HG2_Ill_Krunchall_1869:HG2_Ill_GATKHCSBGrefine_899:HG2_Ill_250bpfermikitraw_1820:HG2_PB_pbsv_1343:HG3_PB_SVrefine2PBcRDovetail_730:HG3_PB_SVrefine2Falcon1Dovetail_837:HG3_Ill_SVrefine2DISCOVARDovetail_958:HG2_PB_SVrefine2PBcRplusDovetail_890:HG2_PB_SVrefine2PB10Xhap12_1091:HG2_PB_SVrefine2Falcon1plusDovetail_922;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1820:HG2_Ill_GATKHCSBGrefine_899:HG2_Ill_Krunchall_1869:HG2_Ill_SpiralSDKrefine_1320:HG2_Ill_svaba_1670:HG3_Ill_150bpfermikitraw_1735:HG3_Ill_250bpfermikitraw_1810:HG3_Ill_GATKHCSBGrefine_906:HG3_Ill_GATKHC_2245:HG3_Ill_Krunchall_1895:HG3_Ill_svaba_1706:HG3_PB_HySA_2091;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0123457;ClusterMaxSizeDiff=0.0122699;ClusterMaxEditDist=0.0736196;PBcalls=8;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-81;DistBack=1790;DistForward=-74;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=161;REFWIDENED=1:242860193-242860434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=307.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:./.:18:24:4:0:0|1:20:1:0:10:0/1:26:10:./.:.:.:.:.:.
chr1	243782746	HG2_PB_assemblyticsPBcR_2037	CACTAGGTCTTATTACAACTGTACTTCTGTACCTATTAATCAACTCCATCTCCCCATCCCCCTACCATTCCCAGCCTCTAGGAACAACCAATCTACTGTCTATCTTGATGCAATCCCGTTTTTTAGCTCCCACATAAGAACAAAAATGTGCAATATTTGTCTTTCTGTGCCTGGCTTATTTCACTTAACATAATGGGTTCCATTTCCATCAATGTTGCTGCAGATAACGTGATTTCATTCTTTTTATGGCTAAGTAATATTCCACTCTGTACATATATCGCATTTATCCTTTCATTCATTGATGGGCACTTAGGTTGATTACATATTTTGGCTGTTGTGAATAGTGCTGCAATAAACCTAAGGGTGTAGATGTCTCCCCGATATGATGATTTCCTTTGTTTTGGATATATATATGGTAGTTCTATTTTTAGTTTTTGAGGAACTTTCATATGGTTTTCTATAGTGGTTATACTGATTTACATTCCCACCAACAGCATAGGAGAGTTCCCTTTAGCATCTGTGATTTTTTTGTTTTTTTGATAAAAGTCATTGTAACTGGGGTGAGATGATGATATGGTTAGGTATCCACCCAAGTCTCATCTTGAATTGTAATCCCCATAATCCCTACATGTCGAGGGAGAGACCTGCTGGGAGGTGACTGGGATCAGGGGGCAGTGTCCCCCACGCTGTTCTTGTGATAGTGAGTGAATTCTTAGGAGCTCTGATGGTTTTATAAGTGTCTGACAGTTCCTCTTCACACACTCGCCCTTTCTTCGCCTGATACCACACAAGACATGCCTCTTCCCCCTTCCATCATGACTGTAAGTTTCCTGAAGCCTCCCCAGCCATGCAGAACTGTGAGTCAATTAAACCTCTTTTCTTTATAAATTACCCAATCTTGGGCAGTTCTTTATACCAGTGTGAGAATGAACTAATACAGATGATATCACATTGTGGTTTTGATTTGCATTTCCCTGATGAGTAGTGATATGACACACTTTTACAAATTA	AGTATACATTGCT	20	PASS	ClusterIDs=HG2_10X_allpass_218:HG2_PB_pbsv_1351:HG4_PB_pbsv_1370:HG3_PB_pbsv_1330:HG2_Ill_SpiralSDKrefine_1325:HG2_Ill_tnscope_160:HG4_PB_SVrefine2PBcRDovetail_744:HG4_PB_SVrefine2Falcon1Dovetail_861:HG4_Ill_SVrefine2DISCOVARDovetail_1006:HG3_PB_assemblyticsfalcon_2026:HG3_PB_SVrefine2PBcRDovetail_739:HG3_PB_SVrefine2Falcon1Dovetail_845:HG3_Ill_SVrefine2DISCOVARDovetail_965:HG2_PB_assemblyticsfalcon_2050:HG2_PB_assemblyticsPBcR_2037:HG2_PB_SVrefine2PBcRplusDovetail_895:HG2_PB_SVrefine2PB10Xhap12_1101:HG2_PB_SVrefine2Falcon2Bionano_431:HG2_PB_SVrefine2Falcon1plusDovetail_926:HG2_Ill_SVrefine2DISCOVARplusDovetail_1079:HG2_10X_SVrefine210Xhap12_1047:HG3_10X_allpass_263:HG4_PB_assemblyticsfalcon_1967:HG4_Ill_Krunchall_1959:HG3_Ill_Krunchall_1899:HG2_Ill_Krunchall_1874:HG3_Ill_MetaSV_384:HG4_Ill_MetaSV_415:HG2_Ill_MetaSV_400:HG4_10X_allpass_236;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1047:HG2_Ill_SVrefine2DISCOVARplusDovetail_1079:HG2_PB_SVrefine2Falcon1plusDovetail_926:HG2_PB_SVrefine2Falcon2Bionano_431:HG2_PB_SVrefine2PB10Xhap12_1101:HG2_PB_SVrefine2PBcRplusDovetail_895:HG2_PB_assemblyticsPBcR_2037:HG2_PB_assemblyticsfalcon_2050:HG3_Ill_SVrefine2DISCOVARDovetail_965:HG3_PB_SVrefine2Falcon1Dovetail_845:HG3_PB_SVrefine2PBcRDovetail_739:HG3_PB_assemblyticsfalcon_2026:HG4_Ill_SVrefine2DISCOVARDovetail_1006:HG4_PB_SVrefine2Falcon1Dovetail_861:HG4_PB_SVrefine2PBcRDovetail_744;NumExactMatchSVs=15;ClusterMaxShiftDist=0.111954;ClusterMaxSizeDiff=0.111954;ClusterMaxEditDist=0.111954;PBcalls=15;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-997;DistBack=-571;DistForward=-737;DistMin=-737;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=1:243782746-243783755;PctSeqSimilarity=0.944;PctSizeSimilarity=0.999;PctRecOverlap=0.9871;SizeDiff=1;StartDistance=-4;EndDistance=9;GTMatch=0;TruScore=97;MatchId=308.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:83:1/1:0:36:0:21:1/1:0:19:0:13:1/1:0:28:1/1:2:66:.:.:.
chr1	244746212	HG2_PB_assemblyticsfalcon_2063	GATATATATATATATATATATATATATATATATATATATATATATATATATAT	G	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_2038:HG4_PB_pbsv_1378:HG4_PB_assemblyticsfalcon_1983:HG2_PB_pbsv_1358:HG2_PB_HySA_2651:HG4_Ill_svaba_1700:HG4_Ill_scalpel_1278:HG4_Ill_manta_335:HG4_Ill_Krunchall_1971:HG4_Ill_GATKHC_2209:HG4_Ill_GATKHCSBGrefine_941:HG4_Ill_FB_1257:HG4_Ill_250bpfermikitraw_1822:HG4_Ill_150bpfermikitraw_1772:HG3_PB_pbsv_1339:HG3_Ill_svaba_1718:HG3_Ill_scalpel_1413:HG3_Ill_manta_297:HG3_Ill_Krunchall_1909:HG3_Ill_GATKHC_2265:HG3_Ill_GATKHCSBGrefine_918:HG3_Ill_250bpfermikitraw_1826:HG3_Ill_150bpfermikitraw_1747:HG3_CG_vcfBeta_805:HG3_10X_allpass_264:HG2_PB_assemblyticsfalcon_2063:HG2_PB_assemblyticsPBcR_2047:HG2_Ill_svaba_1682:HG2_Ill_scalpel_1323:HG2_Ill_manta_383:HG2_Ill_SpiralSDKrefine_1332:HG2_Ill_Krunchall_1886:HG2_Ill_GATKHC_2220:HG2_Ill_GATKHCSBGrefine_914:HG2_Ill_250bpfermikitraw_1839:HG2_Ill_150bpfermikitraw_1696:HG2_CG_vcfBeta_829:HG2_Ill_breakscan11_163;NumClusterSVs=38;ExactMatchIDs=HG2_CG_vcfBeta_829:HG2_Ill_150bpfermikitraw_1696:HG2_Ill_250bpfermikitraw_1839:HG2_Ill_GATKHCSBGrefine_914:HG2_Ill_GATKHC_2220:HG2_Ill_Krunchall_1886:HG2_Ill_SpiralSDKrefine_1332:HG2_Ill_manta_383:HG2_Ill_scalpel_1323:HG2_Ill_svaba_1682:HG2_PB_assemblyticsPBcR_2047:HG2_PB_assemblyticsfalcon_2063:HG3_10X_allpass_264:HG3_CG_vcfBeta_805:HG3_Ill_150bpfermikitraw_1747:HG3_Ill_250bpfermikitraw_1826:HG3_Ill_GATKHCSBGrefine_918:HG3_Ill_GATKHC_2265:HG3_Ill_Krunchall_1909:HG3_Ill_manta_297:HG3_Ill_scalpel_1413:HG3_Ill_svaba_1718:HG3_PB_pbsv_1339:HG4_Ill_150bpfermikitraw_1772:HG4_Ill_250bpfermikitraw_1822:HG4_Ill_FB_1257:HG4_Ill_GATKHCSBGrefine_941:HG4_Ill_GATKHC_2209:HG4_Ill_Krunchall_1971:HG4_Ill_manta_335:HG4_Ill_scalpel_1278:HG4_Ill_svaba_1700;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0384615;PBcalls=8;Illcalls=27;TenXcalls=1;CGcalls=2;PBexactcalls=3;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=2;HG2count=15;HG3count=12;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-52;DistBack=29287;DistForward=17736;DistMin=17736;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=1:244746213-244746279;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=310.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:0:21:1:10:./.:1:18:1:12:1/1:0:51:./.:.:.:.:.:.
chr1	245845696	HG3_PB_SVrefine2PBcRDovetail_749	CAAGAGCTGACTGTATATGATCACAACCTAACTGAGCAGAACTCACCCTCCACTACTCATGT	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_442:HG2_PB_pbsv_1374:HG3_PB_pbsv_1355:HG3_PB_SVrefine2PBcRDovetail_749:HG2_PB_SVrefine2PB10Xhap12_1116;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_442:HG3_PB_SVrefine2PBcRDovetail_749:HG2_PB_SVrefine2PB10Xhap12_1116;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0666667;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-61;DistBack=9075;DistForward=-62;DistMin=-62;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=297;REFWIDENED=1:245845697-245846054;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.9194;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=97;MatchId=312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:28:0|1:25:3:4:21:./.:2:0:2:0:0/0:11:0:./.:.:.:.:.:.
chr1	245859037	HG2_Ill_SVrefine2DISCOVARplusDovetail_1089	CACTCTCCAGGTGTTTTTACCTTCTCTACTCCCAGCTCACACGGTGCCCTGGCACGGGTATTGGCAGGACTCTCCAGGTGTTTTTACCTTCTCTACTCCCAGCTCACACGGTGCCCTGGCACGGGTATTGGCAGG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1089:HG4_PB_assemblyticsfalcon_2002:HG4_PB_SVrefine2Falcon1Dovetail_876:HG4_PB_pbsv_1392:HG3_PB_pbsv_1356:HG3_PB_SVrefine2PBcRDovetail_751:HG4_Ill_GATKHCSBGrefine_946:HG3_Ill_GATKHCSBGrefine_921:HG3_Ill_250bpfermikitraw_1835:HG3_Ill_150bpfermikitraw_1756:HG3_10X_allpass_268:HG2_Ill_GATKHCSBGrefine_921:HG2_PB_pbsv_1375:HG4_PB_SVrefine2PBcRDovetail_756:HG3_PB_SVrefine2PBcRDovetail_750:HG3_Ill_SVrefine2DISCOVARDovetail_979:HG2_PB_SVrefine2PBcRplusDovetail_905:HG2_PB_SVrefine2PB10Xhap12_1117:HG2_PB_SVrefine2Falcon2Bionano_443;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1089:HG4_PB_SVrefine2PBcRDovetail_756:HG3_PB_SVrefine2PBcRDovetail_750:HG3_Ill_SVrefine2DISCOVARDovetail_979:HG2_PB_SVrefine2PBcRplusDovetail_905:HG2_PB_SVrefine2PB10Xhap12_1117:HG2_PB_SVrefine2Falcon2Bionano_443;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0223048;ClusterMaxSizeDiff=0.0223048;ClusterMaxEditDist=0.0299625;PBcalls=11;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-134;DistBack=13179;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=130;REFWIDENED=1:245859038-245859301;PctSeqSimilarity=0.9919;PctSizeSimilarity=1;PctRecOverlap=0.9185;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=97;MatchId=313.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:32:0|1:22:1:0:40:./.:19:0:2:6:0/1:28:13:./.:.:.:.:.:.
chr1	246167282	HG2_Ill_GATKHCSBGrefine_924	AGGGCATGGGAGCAAAACCACATGCTTTGGCTCAGACCTCGATTGGAATTCGGGCACCGCCACTTACTAAGGGGCCTTCTCAAGCCTGTCTCCTATCT	A	20	PASS	ClusterIDs=HG2_Ill_Cortex_639:HG2_PB_HySA_2683:HG4_PB_HySA_2104:HG4_PB_SVrefine2PBcRDovetail_762:HG4_PB_SVrefine2Falcon1Dovetail_881:HG4_Ill_svaba_1716:HG4_Ill_scalpel_1288:HG4_Ill_manta_341:HG4_Ill_SVrefine2DISCOVARDovetail_1027:HG4_Ill_GATKHC_2228:HG4_Ill_GATKHCSBGrefine_952:HG4_Ill_250bpfermikitraw_1839:HG4_Ill_150bpfermikitraw_1786:HG4_CG_vcfBeta_942:HG4_10X_allpass_240:HG3_PB_SVrefine2PBcRDovetail_758:HG3_PB_SVrefine2Falcon1Dovetail_864:HG3_Ill_svaba_1738:HG3_Ill_scalpel_1427:HG3_Ill_SVrefine2DISCOVARDovetail_982:HG3_Ill_GATKHC_2288:HG3_Ill_GATKHCSBGrefine_926:HG3_Ill_250bpfermikitraw_1843:HG3_Ill_150bpfermikitraw_1763:HG3_CG_vcfBeta_818:HG3_10X_allpass_270:HG2_PB_SVrefine2PBcRplusDovetail_911:HG2_PB_SVrefine2PB10Xhap12_1123:HG2_PB_SVrefine2Falcon2Bionano_449:HG2_PB_SVrefine2Falcon1plusDovetail_942:HG2_PB_HySA_2682:HG2_Ill_svaba_1700:HG2_Ill_scalpel_1337:HG2_Ill_manta_389:HG2_Ill_SpiralSDKrefine_1347:HG2_Ill_SVrefine2DISCOVARplusDovetail_1094:HG2_Ill_GATKHC_2245:HG2_Ill_GATKHCSBGrefine_924:HG2_Ill_250bpfermikitraw_1861:HG2_Ill_150bpfermikitraw_1711:HG2_CG_vcfBeta_842:HG2_10X_allpass_221:HG2_10X_SVrefine210Xhap12_1066:HG4_Ill_Krunchall_1991:HG3_Ill_Krunchall_1927:HG2_Ill_Krunchall_1907:HG2_PB_pbsv_1383:HG4_PB_pbsv_1401:HG3_PB_pbsv_1365:HG4_Ill_Cortex_295:HG3_Ill_Cortex_309;NumClusterSVs=51;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1066:HG2_10X_allpass_221:HG2_CG_vcfBeta_842:HG2_Ill_150bpfermikitraw_1711:HG2_Ill_250bpfermikitraw_1861:HG2_Ill_GATKHCSBGrefine_924:HG2_Ill_GATKHC_2245:HG2_Ill_SVrefine2DISCOVARplusDovetail_1094:HG2_Ill_SpiralSDKrefine_1347:HG2_Ill_manta_389:HG2_Ill_scalpel_1337:HG2_Ill_svaba_1700:HG2_PB_HySA_2682:HG2_PB_SVrefine2Falcon1plusDovetail_942:HG2_PB_SVrefine2Falcon2Bionano_449:HG2_PB_SVrefine2PB10Xhap12_1123:HG2_PB_SVrefine2PBcRplusDovetail_911:HG3_10X_allpass_270:HG3_CG_vcfBeta_818:HG3_Ill_150bpfermikitraw_1763:HG3_Ill_250bpfermikitraw_1843:HG3_Ill_GATKHCSBGrefine_926:HG3_Ill_GATKHC_2288:HG3_Ill_SVrefine2DISCOVARDovetail_982:HG3_Ill_scalpel_1427:HG3_Ill_svaba_1738:HG3_PB_SVrefine2Falcon1Dovetail_864:HG3_PB_SVrefine2PBcRDovetail_758:HG4_10X_allpass_240:HG4_CG_vcfBeta_942:HG4_Ill_150bpfermikitraw_1786:HG4_Ill_250bpfermikitraw_1839:HG4_Ill_GATKHCSBGrefine_952:HG4_Ill_GATKHC_2228:HG4_Ill_SVrefine2DISCOVARDovetail_1027:HG4_Ill_manta_341:HG4_Ill_scalpel_1288:HG4_Ill_svaba_1716:HG4_PB_SVrefine2Falcon1Dovetail_881:HG4_PB_SVrefine2PBcRDovetail_762;NumExactMatchSVs=40;ClusterMaxShiftDist=0.0204082;ClusterMaxSizeDiff=0.0204082;ClusterMaxEditDist=0.102564;PBcalls=14;Illcalls=30;TenXcalls=4;CGcalls=3;PBexactcalls=9;Illexactcalls=24;TenXexactcalls=4;CGexactcalls=3;HG2count=21;HG3count=14;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-97;DistBack=1549;DistForward=5894;DistMin=1549;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:246167283-246167380;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=314.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:55:./.:0:1:3:44:./.:0:0:0:8:1/1:0:45:./.:.:.:.:.:.
chr1	246593060	HG4_PB_SVrefine2PBcRDovetail_769	TTAACTCCTGCCTCAAGGATATGACTGGCAAGTACTAAATAATCATACGAGAAACGG	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_951:HG3_PB_assemblyticsfalcon_2080:HG3_PB_pbsv_1379:HG4_PB_pbsv_1412:HG2_PB_pbsv_1395:HG4_PB_SVrefine2PBcRDovetail_769:HG4_PB_SVrefine2Falcon1Dovetail_890:HG3_PB_SVrefine2PBcRDovetail_766:HG2_PB_SVrefine2PBcRplusDovetail_921:HG2_PB_SVrefine2PB10Xhap12_1133:HG2_PB_SVrefine2Falcon2Bionano_459;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_951:HG4_PB_SVrefine2PBcRDovetail_769:HG4_PB_SVrefine2Falcon1Dovetail_890:HG3_PB_SVrefine2PBcRDovetail_766:HG2_PB_SVrefine2PBcRplusDovetail_921:HG2_PB_SVrefine2PB10Xhap12_1133:HG2_PB_SVrefine2Falcon2Bionano_459;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0917431;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-56;DistBack=-1;DistForward=-57;DistMin=-57;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=389;REFWIDENED=1:246593061-246593505;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=315.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:68:1/1:2:12:1:21:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr1	246657100	HG3_Ill_150bpfermikitraw_1773	CAGCTCAAAACCCAGCACTCACCCTTCACCACAGAGCAGTACTGTCACCACTATTCCAATAGTTCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1080:HG2_PB_pbsv_1398:HG2_Ill_breakscan11_167:HG3_PB_HySA_2156:HG3_Ill_GATKHC_2300:HG3_Ill_GATKHCSBGrefine_934:HG3_Ill_250bpfermikitraw_1855:HG3_Ill_150bpfermikitraw_1773:HG2_PB_assemblyticsfalcon_2105:HG2_Ill_GATKHCSBGrefine_932:HG2_Ill_250bpfermikitraw_1875:HG3_PB_pbsv_1383:HG3_PB_SVrefine2PBcRDovetail_767:HG3_PB_SVrefine2Falcon1Dovetail_873:HG3_Ill_SVrefine2DISCOVARDovetail_993:HG2_PB_SVrefine2PBcRplusDovetail_922:HG2_PB_SVrefine2PB10Xhap12_1135:HG2_PB_SVrefine2Falcon2Bionano_460;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1875:HG2_Ill_GATKHCSBGrefine_932:HG2_PB_assemblyticsfalcon_2105:HG3_Ill_150bpfermikitraw_1773:HG3_Ill_250bpfermikitraw_1855:HG3_Ill_GATKHCSBGrefine_934:HG3_Ill_GATKHC_2300:HG3_PB_HySA_2156;NumExactMatchSVs=8;ClusterMaxShiftDist=0.110236;ClusterMaxSizeDiff=0.110236;ClusterMaxEditDist=0.193548;PBcalls=9;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-65;DistBack=-66;DistForward=17961;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=189;REFWIDENED=1:246656940-246657193;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=316.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:30:0|1:16:1:2:36:1|0:0:9:8:1:0/1:16:15:./.:.:.:.:.:.
chr1	246946247	HG3_PB_SVrefine2PBcRDovetail_775	ACATCTACACACCCTGTCACAAGAGACCCCCAGACCACAGCCTTCCAGACGTCTCCATCTACACACCCTGTCACAAGAGACCCCCAGACCACAGCCTTCCAGAAGCCTCCATCTACACACCGTGTCACAAGAGAGACCCCCAGGCCACAGCCTTCCAGAAGCCTCCATCTACACACCGTGTCACAAGAGACCCCCAGACCACAGCCTTCCAGAAGCCTCCATCTACACACCGTGTCACAAGAGACCCCCAGACCACAGCCTTCCAGAAGCCTC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_959:HG4_PB_assemblyticsfalcon_2041:HG4_PB_SVrefine2Falcon1Dovetail_901:HG4_PB_pbsv_1426:HG4_10X_allpass_242:HG4_Ill_250bpfermikitraw_1858:HG3_PB_pbsv_1398:HG2_PB_pbsv_1412:HG2_10X_SVrefine210Xhap12_1087:HG4_PB_SVrefine2PBcRDovetail_780:HG4_PB_SVrefine2Falcon1Dovetail_900:HG4_Ill_SVrefine2DISCOVARDovetail_1038:HG3_PB_SVrefine2PBcRDovetail_775:HG3_Ill_SVrefine2DISCOVARDovetail_996:HG2_PB_SVrefine2PBcRplusDovetail_929:HG2_PB_SVrefine2Falcon2Bionano_469;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_959:HG4_PB_SVrefine2PBcRDovetail_780:HG4_PB_SVrefine2Falcon1Dovetail_900:HG4_Ill_SVrefine2DISCOVARDovetail_1038:HG3_PB_SVrefine2PBcRDovetail_775:HG3_Ill_SVrefine2DISCOVARDovetail_996:HG2_PB_SVrefine2PBcRplusDovetail_929:HG2_PB_SVrefine2Falcon2Bionano_469;NumExactMatchSVs=8;ClusterMaxShiftDist=0.187291;ClusterMaxSizeDiff=0.187291;ClusterMaxEditDist=0.257525;PBcalls=11;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-272;DistBack=-109;DistForward=-152;DistMin=-152;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=433;REFWIDENED=1:246946248-246946952;PctSeqSimilarity=0.9706;PctSizeSimilarity=1;PctRecOverlap=0.7546;SizeDiff=0;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=90;MatchId=317.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:17:0|1:16:0:2:12:./.:5:0:2:2:0/1:14:7:./.:.:.:.:1338:.
chr1	246969897	HG4_PB_assemblyticsfalcon_2044	TGACCTAATATAAATGATTGCATTTATACGAAAATCACTACAATTAGGCATATCTAATCTATAATGACAAAGGTCCATTTCTTCTGGTGGGAG	T	20	PASS	ClusterIDs=HG2_PB_HySA_2719:HG4_PB_pbsv_1429:HG4_PB_assemblyticsfalcon_2044:HG4_PB_SVrefine2PBcRDovetail_782:HG4_PB_SVrefine2Falcon1Dovetail_904:HG4_Ill_svaba_1734:HG4_Ill_scalpel_1300:HG4_Ill_manta_345:HG4_Ill_SVrefine2DISCOVARDovetail_1041:HG4_Ill_Krunchall_2008:HG4_Ill_GATKHC_2247:HG4_Ill_GATKHCSBGrefine_961:HG4_Ill_Cortex_297:HG4_Ill_250bpfermikitraw_1859:HG4_Ill_150bpfermikitraw_1802:HG4_CG_vcfBeta_946:HG4_10X_allpass_243:HG3_PB_pbsv_1401:HG3_PB_assemblyticsfalcon_2107:HG3_PB_SVrefine2PBcRDovetail_777:HG3_PB_SVrefine2Falcon1Dovetail_881:HG3_Ill_svaba_1757:HG3_Ill_scalpel_1439:HG3_Ill_manta_303:HG3_Ill_SVrefine2DISCOVARDovetail_997:HG3_Ill_Krunchall_1943:HG3_Ill_GATKHC_2311:HG3_Ill_GATKHCSBGrefine_939:HG3_Ill_Cortex_312:HG3_Ill_250bpfermikitraw_1863:HG3_Ill_150bpfermikitraw_1781:HG3_CG_vcfBeta_827:HG3_10X_allpass_271:HG2_PB_pbsv_1415:HG2_PB_assemblyticsfalcon_2121:HG2_PB_assemblyticsPBcR_2105:HG2_PB_SVrefine2PBcRplusDovetail_931:HG2_PB_SVrefine2PB10Xhap12_1150:HG2_PB_SVrefine2Falcon2Bionano_471:HG2_PB_SVrefine2Falcon1plusDovetail_961:HG2_Ill_svaba_1720:HG2_Ill_scalpel_1352:HG2_Ill_manta_392:HG2_Ill_SpiralSDKrefine_1361:HG2_Ill_SVrefine2DISCOVARplusDovetail_1103:HG2_Ill_Krunchall_1924:HG2_Ill_GATKHC_2264:HG2_Ill_GATKHCSBGrefine_936:HG2_Ill_Cortex_642:HG2_Ill_250bpfermikitraw_1885:HG2_Ill_150bpfermikitraw_1730:HG2_CG_vcfBeta_847:HG2_10X_allpass_222:HG2_10X_SVrefine210Xhap12_1089:HG2_Ill_breakscan11_171;NumClusterSVs=55;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1089:HG2_10X_allpass_222:HG2_CG_vcfBeta_847:HG2_Ill_150bpfermikitraw_1730:HG2_Ill_250bpfermikitraw_1885:HG2_Ill_Cortex_642:HG2_Ill_GATKHCSBGrefine_936:HG2_Ill_GATKHC_2264:HG2_Ill_Krunchall_1924:HG2_Ill_SVrefine2DISCOVARplusDovetail_1103:HG2_Ill_SpiralSDKrefine_1361:HG2_Ill_manta_392:HG2_Ill_scalpel_1352:HG2_Ill_svaba_1720:HG2_PB_SVrefine2Falcon1plusDovetail_961:HG2_PB_SVrefine2Falcon2Bionano_471:HG2_PB_SVrefine2PB10Xhap12_1150:HG2_PB_SVrefine2PBcRplusDovetail_931:HG2_PB_assemblyticsPBcR_2105:HG2_PB_assemblyticsfalcon_2121:HG2_PB_pbsv_1415:HG3_10X_allpass_271:HG3_CG_vcfBeta_827:HG3_Ill_150bpfermikitraw_1781:HG3_Ill_250bpfermikitraw_1863:HG3_Ill_Cortex_312:HG3_Ill_GATKHCSBGrefine_939:HG3_Ill_GATKHC_2311:HG3_Ill_Krunchall_1943:HG3_Ill_SVrefine2DISCOVARDovetail_997:HG3_Ill_manta_303:HG3_Ill_scalpel_1439:HG3_Ill_svaba_1757:HG3_PB_SVrefine2Falcon1Dovetail_881:HG3_PB_SVrefine2PBcRDovetail_777:HG3_PB_assemblyticsfalcon_2107:HG3_PB_pbsv_1401:HG4_10X_allpass_243:HG4_CG_vcfBeta_946:HG4_Ill_150bpfermikitraw_1802:HG4_Ill_250bpfermikitraw_1859:HG4_Ill_Cortex_297:HG4_Ill_GATKHCSBGrefine_961:HG4_Ill_GATKHC_2247:HG4_Ill_Krunchall_2008:HG4_Ill_SVrefine2DISCOVARDovetail_1041:HG4_Ill_manta_345:HG4_Ill_scalpel_1300:HG4_Ill_svaba_1734:HG4_PB_SVrefine2Falcon1Dovetail_904:HG4_PB_SVrefine2PBcRDovetail_782:HG4_PB_assemblyticsfalcon_2044:HG4_PB_pbsv_1429;NumExactMatchSVs=53;ClusterMaxShiftDist=0.0215054;ClusterMaxSizeDiff=0.0215054;ClusterMaxEditDist=0.0215054;PBcalls=16;Illcalls=32;TenXcalls=4;CGcalls=3;PBexactcalls=15;Illexactcalls=31;TenXexactcalls=4;CGexactcalls=3;HG2count=23;HG3count=16;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-92;DistBack=12457;DistForward=2998;DistMin=2998;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=1:246969898-246969989;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:21:0:31:1/1:0:11:0:15:1/1:0:48:./.:.:.:.:.:.
chr1	247536758	HG3_Ill_scalpel_1452	GAGGTTGCAGTGAGCTGAGATAGTGCCATTGCACTCCAGCCTGGGCGACATAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATTTAGCCGGGCGTGGTGGCGCGCGCCTGTAATCCCAGCTACTCCCGAAGCTGAGGCAGGAGAATCGCTTGAGCCCGGGGGCGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1093:HG3_PB_HySA_2177:HG4_PB_HySA_2159:HG4_PB_pbsv_1441:HG3_PB_pbsv_1412:HG2_PB_HySA_2743:HG2_Ill_MetaSV_419:HG4_Ill_scalpel_1311:HG4_Ill_manta_348:HG4_Ill_MetaSV_432:HG4_Ill_GATKHC_2266:HG4_Ill_GATKHCSBGrefine_967:HG4_10X_allpass_245:HG3_Ill_scalpel_1452:HG3_Ill_MetaSV_398:HG3_Ill_GATKHC_2328:HG3_Ill_GATKHCSBGrefine_947:HG3_Ill_150bpfermikitraw_1797:HG2_Ill_scalpel_1362:HG2_Ill_GATKHC_2280:HG2_Ill_GATKHCSBGrefine_942:HG2_10X_allpass_223:HG4_Ill_Spiral_103:HG2_PB_pbsv_1425:HG4_PB_SVrefine2PBcRDovetail_786:HG4_PB_SVrefine2Falcon1Dovetail_911:HG4_Ill_SVrefine2DISCOVARDovetail_1044:HG3_PB_SVrefine2PBcRDovetail_780:HG3_PB_SVrefine2Falcon1Dovetail_887:HG3_Ill_SVrefine2DISCOVARDovetail_1000:HG2_PB_SVrefine2PBcRplusDovetail_938:HG2_PB_SVrefine2PB10Xhap12_1157:HG2_PB_SVrefine2Falcon2Bionano_475:HG2_PB_SVrefine2Falcon1plusDovetail_969:HG2_Ill_SVrefine2DISCOVARplusDovetail_1106;NumClusterSVs=35;ExactMatchIDs=HG2_10X_allpass_223:HG2_Ill_GATKHCSBGrefine_942:HG2_Ill_GATKHC_2280:HG2_Ill_scalpel_1362:HG3_Ill_150bpfermikitraw_1797:HG3_Ill_GATKHCSBGrefine_947:HG3_Ill_GATKHC_2328:HG3_Ill_MetaSV_398:HG3_Ill_scalpel_1452:HG4_10X_allpass_245:HG4_Ill_GATKHCSBGrefine_967:HG4_Ill_GATKHC_2266:HG4_Ill_MetaSV_432:HG4_Ill_manta_348:HG4_Ill_scalpel_1311;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0102041;ClusterMaxSizeDiff=0.0102041;ClusterMaxEditDist=0.0663265;PBcalls=14;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-195;DistBack=10129;DistForward=-105;DistMin=-105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3663;REFWIDENED=1:247527032-247536871;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=319.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:32:1/1:1:15:0:13:1/1:0:7:0:6:1/1:1:31:./.:.:.:.:.:.
chr1	247850455	HG4_PB_SVrefine2Falcon1Dovetail_917	TAAAAAATGAAAAGAAAGATCGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCAATAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCAAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGTGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGTACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACTGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAATGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACTAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGGTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTGCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAATCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTCAAACCAACGAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAGTCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACTCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACTTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGTTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAACCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGTCTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTGAGAGTATAATAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_1944:HG4_PB_assemblyticsfalcon_2069:HG3_PB_assemblyticsfalcon_2133:HG2_PB_assemblyticsfalcon_2149:HG2_PB_assemblyticsPBcR_2127:HG4_10X_allpass_247:HG3_10X_allpass_272:HG2_10X_allpass_226:HG4_PB_pbsv_1449:HG4_Ill_GATKHCSBGrefine_972:HG3_Ill_MetaSV_400:HG3_Ill_GATKHCSBGrefine_954:HG2_PB_HySA_2754:HG2_Ill_GATKHCSBGrefine_947:HG2_Ill_breakscan11_174:HG2_Ill_tnscope_161:HG4_PB_SVrefine2PBcRDovetail_790:HG4_PB_SVrefine2Falcon1Dovetail_917:HG4_Ill_SVrefine2DISCOVARDovetail_1049:HG3_PB_pbsv_1422:HG3_PB_SVrefine2PBcRDovetail_785:HG3_PB_SVrefine2Falcon1Dovetail_895:HG3_Ill_SVrefine2DISCOVARDovetail_1008:HG2_PB_pbsv_1435:HG2_PB_SVrefine2PBcRplusDovetail_944:HG2_PB_SVrefine2PB10Xhap12_1165:HG2_PB_SVrefine2Falcon2Bionano_479:HG2_PB_SVrefine2Falcon1plusDovetail_976:HG2_Ill_SVrefine2DISCOVARplusDovetail_1110:HG2_10X_SVrefine210Xhap12_1101:HG4_Ill_MetaSV_434:HG2_Ill_MetaSV_420:HG4_Ill_Krunchall_2028:HG3_Ill_Krunchall_1967;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1101:HG2_Ill_SVrefine2DISCOVARplusDovetail_1110:HG2_PB_SVrefine2Falcon1plusDovetail_976:HG2_PB_SVrefine2Falcon2Bionano_479:HG2_PB_SVrefine2PB10Xhap12_1165:HG2_PB_SVrefine2PBcRplusDovetail_944:HG2_PB_pbsv_1435:HG3_Ill_SVrefine2DISCOVARDovetail_1008:HG3_PB_SVrefine2Falcon1Dovetail_895:HG3_PB_SVrefine2PBcRDovetail_785:HG3_PB_pbsv_1422:HG4_Ill_SVrefine2DISCOVARDovetail_1049:HG4_PB_SVrefine2Falcon1Dovetail_917:HG4_PB_SVrefine2PBcRDovetail_790;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0162976;ClusterMaxSizeDiff=0.0162976;ClusterMaxEditDist=0.0162976;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-6053;DistBack=31080;DistForward=7665;DistMin=7665;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=1:247850456-247856528;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9988;SizeDiff=0;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=99;MatchId=320.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:155:1/1:0:23:1:27:1/1:1:24:1:33:1/1:1:39:1/1:8:403:6182:.:.
chr1	247959050	HG3_Ill_150bpfermikitraw_1809	ACAATGAGAAGAGGGATGCCTGCCACCAGAAGTGGGCCCTTACCAGAACCCAAC	A	20	PASS	ClusterIDs=HG2_PB_HySA_2756:HG3_PB_HySA_2191:HG3_PB_pbsv_1423:HG3_PB_SVrefine2PBcRDovetail_786:HG3_Ill_svaba_1786:HG3_Ill_manta_307:HG3_Ill_SVrefine2DISCOVARDovetail_1009:HG3_Ill_Krunchall_1971:HG3_Ill_GATKHC_2342:HG3_Ill_GATKHCSBGrefine_955:HG3_Ill_FB_1299:HG3_Ill_Cortex_318:HG3_Ill_250bpfermikitraw_1892:HG3_Ill_150bpfermikitraw_1809:HG3_CG_vcfBeta_836:HG2_PB_pbsv_1436:HG2_PB_assemblyticsfalcon_2151:HG2_Ill_svaba_1747:HG2_Ill_scalpel_1372:HG2_Ill_manta_396:HG2_Ill_breakscan11_175:HG2_Ill_SpiralSDKrefine_1377:HG2_Ill_Krunchall_1947:HG2_Ill_GATKHC_2293:HG2_Ill_GATKHCSBGrefine_948:HG2_Ill_Cortex_650:HG2_Ill_250bpfermikitraw_1911:HG2_Ill_150bpfermikitraw_1753:HG2_CG_vcfBeta_856:HG2_10X_SVrefine210Xhap12_1102;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1102:HG2_CG_vcfBeta_856:HG2_Ill_150bpfermikitraw_1753:HG2_Ill_250bpfermikitraw_1911:HG2_Ill_Cortex_650:HG2_Ill_GATKHCSBGrefine_948:HG2_Ill_GATKHC_2293:HG2_Ill_Krunchall_1947:HG2_Ill_SpiralSDKrefine_1377:HG2_Ill_breakscan11_175:HG2_Ill_manta_396:HG2_Ill_scalpel_1372:HG2_Ill_svaba_1747:HG2_PB_assemblyticsfalcon_2151:HG2_PB_pbsv_1436:HG3_CG_vcfBeta_836:HG3_Ill_150bpfermikitraw_1809:HG3_Ill_250bpfermikitraw_1892:HG3_Ill_Cortex_318:HG3_Ill_FB_1299:HG3_Ill_GATKHCSBGrefine_955:HG3_Ill_GATKHC_2342:HG3_Ill_Krunchall_1971:HG3_Ill_SVrefine2DISCOVARDovetail_1009:HG3_Ill_manta_307:HG3_Ill_svaba_1786:HG3_PB_SVrefine2PBcRDovetail_786:HG3_PB_pbsv_1423;NumExactMatchSVs=28;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.037037;PBcalls=6;Illcalls=21;TenXcalls=1;CGcalls=2;PBexactcalls=4;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=2;HG2count=16;HG3count=14;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-53;DistBack=6737;DistForward=4596;DistMin=4596;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=1:247959051-247959105;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:22:./.:34:6:5:14:1|0:0:18:32:0:0/1:48:25:./.:.:.:.:.:.
chr2	886137	HG3_Ill_GATKHCSBGrefine_979	ATGGGGAGCTCCCCCTCAGATCTGACCCTTTTCTGATTCTCTGGCCCATCCGCCCCAGGACTGGAGCTCACACTGCAGCCCTCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1138:HG4_Ill_Krunchall_2068:HG3_PB_HySA_2250:HG3_Ill_Spiral_1535:HG2_Ill_Spiral_77:HG3_PB_pbsv_1482:HG4_PB_pbsv_1501:HG2_PB_pbsv_1490:HG2_PB_HySA_2803:HG4_PB_HySA_2216:HG4_Ill_svaba_1801:HG4_Ill_scalpel_1340:HG4_Ill_manta_352:HG4_Ill_Krunchall_2067:HG4_Ill_GATKHC_2328:HG4_Ill_GATKHCSBGrefine_993:HG4_Ill_250bpfermikitraw_1923:HG3_Ill_svaba_1830:HG3_Ill_scalpel_1488:HG3_Ill_Krunchall_2002:HG3_Ill_GATKHC_2408:HG3_Ill_GATKHCSBGrefine_979:HG3_Ill_250bpfermikitraw_1941:HG2_Ill_svaba_1785:HG2_Ill_scalpel_1392:HG2_Ill_manta_404:HG2_Ill_SpiralSDKrefine_8085:HG2_Ill_Krunchall_1974:HG2_Ill_GATKHC_2341:HG2_Ill_GATKHCSBGrefine_965:HG2_Ill_250bpfermikitraw_1948:HG2_Ill_150bpfermikitraw_1778:HG4_PB_SVrefine2PBcRDovetail_821:HG4_PB_HySA_2215:HG3_PB_SVrefine2PBcRDovetail_818:HG3_Ill_SVrefine2DISCOVARDovetail_1033:HG2_PB_SVrefine2PBcRplusDovetail_5405:HG2_PB_SVrefine2PB10Xhap12_1207:HG2_PB_SVrefine2Falcon2Bionano_502:HG2_PB_SVrefine2Falcon1plusDovetail_5861:HG2_Ill_SVrefine2DISCOVARplusDovetail_6268;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1778:HG2_Ill_250bpfermikitraw_1948:HG2_Ill_GATKHCSBGrefine_965:HG2_Ill_GATKHC_2341:HG2_Ill_Krunchall_1974:HG2_Ill_SpiralSDKrefine_8085:HG2_Ill_manta_404:HG2_Ill_scalpel_1392:HG2_Ill_svaba_1785:HG3_Ill_250bpfermikitraw_1941:HG3_Ill_GATKHCSBGrefine_979:HG3_Ill_GATKHC_2408:HG3_Ill_Krunchall_2002:HG3_Ill_scalpel_1488:HG3_Ill_svaba_1830:HG4_Ill_250bpfermikitraw_1923:HG4_Ill_GATKHCSBGrefine_993:HG4_Ill_GATKHC_2328:HG4_Ill_Krunchall_2067:HG4_Ill_manta_352:HG4_Ill_scalpel_1340:HG4_Ill_svaba_1801:HG4_PB_HySA_2216;NumExactMatchSVs=23;ClusterMaxShiftDist=0.047619;ClusterMaxSizeDiff=0.047619;ClusterMaxEditDist=0.0606061;PBcalls=13;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-84;DistBack=11015;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=84;REFWIDENED=2:886099-886266;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1833.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:59:1/1:6:36:3:12:1/1:0:8:0:10:1/1:0:38:./.:.:.:.:.:.
chr2	1001492	HG4_Ill_250bpfermikitraw_1926	AATATATATATATATATATATATATATATATATATATATATATATATATAT	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_1950:HG2_PB_HySA_2812:HG4_Ill_GATKHC_2335:HG3_Ill_GATKHC_2413:HG2_Ill_GATKHC_2346:HG4_Ill_manta_353:HG3_Ill_manta_310:HG2_Ill_manta_405:HG2_PB_assemblyticsfalcon_12914:HG2_PB_assemblyticsPBcR_12513:HG4_Ill_Spiral_106:HG3_Ill_Spiral_1537:HG2_Ill_Spiral_78:HG3_PB_assemblyticsfalcon_12969:HG4_Ill_svaba_1805:HG4_Ill_250bpfermikitraw_1926:HG4_Ill_150bpfermikitraw_1859:HG3_Ill_svaba_1835:HG3_Ill_250bpfermikitraw_1946:HG2_Ill_svaba_1789:HG2_Ill_breakscan11_185:HG2_Ill_Krunchall_1976;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1950:HG4_Ill_svaba_1805:HG4_Ill_250bpfermikitraw_1926:HG4_Ill_150bpfermikitraw_1859:HG3_Ill_svaba_1835:HG3_Ill_250bpfermikitraw_1946:HG2_Ill_svaba_1789:HG2_Ill_breakscan11_185:HG2_Ill_Krunchall_1976;NumExactMatchSVs=9;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.08;PBcalls=4;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=-39;DistForward=-32;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=2:1001493-1001561;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.98;PctRecOverlap=0.6471;SizeDiff=1;StartDistance=-18;EndDistance=-17;GTMatch=0;TruScore=87;MatchId=1834.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:25:0|1:17:2:1:22:0|1:18:0:0:25:0/1:15:25:./.:.:.:.:.:.
chr2	1089571	HG2_PB_SVrefine2PB10Xhap12_1217	GGTTACTGGCAAGGGCTGCCTTCCTGGCTTGCAGGCGAAGGCCTTATAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAGGGCTGGCTTCCTGGACTGCAGGCGAAGGCCTTATAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAGGGCCAGCTTCCTGGCTTGCAGGCGAAGGCCTTATAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAAGGGCTGCCTTCCTGGCTTGCAGGCGAAGGCCTTATAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAGGGCCAGCTTCCTGGCCTGCAGGCAAAGGCCTTATAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAGGGCCAGCTTCCTGGCCTGCAGGCAAAGGCCTTATAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAGGGCCGGCTTCCTGGACTGCAGGCGAAGGCCTTATAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAGGGCTGGCTTCCTGGACTGCAGGCGAAGGCCTTGTAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAGGGCCAGCTTCCTGGCCTGCAGGCAAAGGCCTTATAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAGGGCTGGCTTCCTGGACTGCAGGCGAAGGCCTTATAGGTGTGTCCTCATATGGTAGAGTTACTGGCAAGGGCCGGCTTCCTGGACTGCAGGCGAAGGCCTTATAGGTGTGTCCTCATATGGTAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1146:HG2_PB_pbsv_1507:HG2_Ill_MetaSV_2401:HG3_PB_pbsv_1502:HG4_PB_SVrefine2Falcon1Dovetail_957:HG3_PB_SVrefine2PBcRDovetail_826:HG3_PB_SVrefine2Falcon1Dovetail_951:HG3_Ill_SVrefine2DISCOVARDovetail_1037:HG2_PB_SVrefine2PB10Xhap12_1217:HG2_PB_SVrefine2Falcon2Bionano_510:HG2_PB_SVrefine2Falcon1plusDovetail_5872:HG2_Ill_SVrefine2DISCOVARplusDovetail_6272;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6272:HG2_PB_SVrefine2Falcon1plusDovetail_5872:HG2_PB_SVrefine2Falcon2Bionano_510:HG2_PB_SVrefine2PB10Xhap12_1217:HG3_Ill_SVrefine2DISCOVARDovetail_1037:HG3_PB_SVrefine2Falcon1Dovetail_951:HG3_PB_SVrefine2PBcRDovetail_826:HG4_PB_SVrefine2Falcon1Dovetail_957;NumExactMatchSVs=8;ClusterMaxShiftDist=0.363757;ClusterMaxSizeDiff=0.363757;ClusterMaxEditDist=0.363757;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-749;DistBack=-274;DistForward=-748;DistMin=-748;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=409;REFWIDENED=2:1089572-1090729;PctSeqSimilarity=0.9823;PctSizeSimilarity=1;PctRecOverlap=0.7373;SizeDiff=0;StartDistance=-197;EndDistance=-197;GTMatch=0;TruScore=90;MatchId=1835.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:27:0|1:32:0:3:19:./.:12:6:20:0:0/0:42:3:0/1:25:8:.:.:.
chr2	1239229	HG2_Ill_SVrefine2DISCOVARplusDovetail_6276	ATGCTGCCCTGAGGTCCCTGCAGGCCCCACCAGGCACACCCTATTCATGAGAGGGGGGCCCCTGCCCCACGCTGCCCTGAGGTCCCTGCAGGCCCCACCAGGCACCCCCGATTCATGAGAGGGGGGACCCCTGCCCCAC	GT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_960:HG2_Ill_SpiralSDKrefine_8096:HG2_PB_pbsv_1518:HG4_Ill_GATKHC_2349:HG2_Ill_GATKHC_2358:HG4_PB_pbsv_1523:HG4_Ill_SVrefine2DISCOVARDovetail_1074:HG2_PB_SVrefine2PBcRplusDovetail_5420:HG2_Ill_SVrefine2DISCOVARplusDovetail_6276:HG2_PB_SVrefine2PB10Xhap12_1225:HG4_PB_SVrefine2PBcRDovetail_830;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6276:HG2_PB_SVrefine2PBcRplusDovetail_5420:HG4_Ill_SVrefine2DISCOVARDovetail_1074;NumExactMatchSVs=3;ClusterMaxShiftDist=0.113208;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.286792;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-137;DistBack=-58;DistForward=16061;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=484;REFWIDENED=2:1238843-1239463;PctSeqSimilarity=0.9964;PctSizeSimilarity=1;PctRecOverlap=0.9928;SizeDiff=0;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1836.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:26:1:0:31:./.:12:1:1:9:0/1:16:14:./.:.:.:.:.:.
chr2	1521325	HG2_PB_SVrefine2Falcon1plusDovetail_5886	TCCTTGCTGCTGCCTCTCACCTTGCTGCTGCCTCTCACCTTGCTGCTGCCTCTCACCTTGCTGCTGCCTCTCA	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_1968:HG3_PB_pbsv_1525:HG2_PB_pbsv_1534:HG3_PB_SVrefine2PBcRDovetail_839:HG3_PB_SVrefine2Falcon1Dovetail_964:HG3_Ill_250bpfermikitraw_1961:HG2_PB_SVrefine2Falcon1plusDovetail_5886:HG2_Ill_SVrefine2DISCOVARplusDovetail_6284;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1968:HG3_PB_SVrefine2PBcRDovetail_839:HG3_PB_SVrefine2Falcon1Dovetail_964:HG3_Ill_250bpfermikitraw_1961:HG2_PB_SVrefine2Falcon1plusDovetail_5886:HG2_Ill_SVrefine2DISCOVARplusDovetail_6284;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0138889;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0277778;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-72;DistBack=6168;DistForward=10;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=118;REFWIDENED=2:1521326-1521515;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1837.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:0|1:7:0:0:5:./.:1:1:0:3:0/1:2:12:./.:.:.:.:1679:.
chr2	1569196	HG4_Ill_GATKHCSBGrefine_1014	CACACCAGTAAACCAGCCGCTACACCAATAAGCCAGCCGCTACAACAGTAAGCCACCCGCT	C	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_986:HG4_PB_HySA_2251:HG2_PB_HySA_2838:HG2_PB_assemblyticsfalcon_12944:HG4_PB_pbsv_1540:HG4_PB_assemblyticsfalcon_12768:HG3_PB_pbsv_1536:HG2_PB_pbsv_1540:HG4_Ill_GATKHC_2364:HG4_Ill_GATKHCSBGrefine_1014:HG3_PB_assemblyticsfalcon_13000:HG2_PB_assemblyticsPBcR_12535:HG2_Ill_GATKHC_2371;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_986:HG4_Ill_GATKHC_2364:HG4_Ill_GATKHCSBGrefine_1014:HG3_PB_assemblyticsfalcon_13000:HG2_PB_assemblyticsPBcR_12535:HG2_Ill_GATKHC_2371;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0819672;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=-403;DistForward=947;DistMin=-403;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=86;REFWIDENED=2:1569195-1569343;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1838.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:14:50:1/1:4:13:3:12:./.:0:2:1:3:./.:0:2:./.:.:.:.:.:.
chr2	1623299	HG3_Ill_GATKHCSBGrefine_990	ACTCAGCCACATACAGGAGGGAACCAGTCTCCCTCCAGCCCCCACTCAGCCACATACAGGAGGGAACCAGTCTCCCTCCAGCC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_1542:HG4_PB_assemblyticsfalcon_12773:HG3_Ill_GATKHCSBGrefine_990:HG2_PB_pbsv_1544;NumClusterSVs=4;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_990;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0470588;ClusterMaxSizeDiff=0.0470588;ClusterMaxEditDist=0.16185;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-82;DistBack=74;DistForward=-47;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=393;REFWIDENED=2:1623010-1623484;PctSeqSimilarity=0.9762;PctSizeSimilarity=0.9535;PctRecOverlap=0.5977;SizeDiff=-4;StartDistance=35;EndDistance=31;GTMatch=0;TruScore=84;MatchId=1839.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:43:./.:9:14:5:27:./.:3:0:3:1:0/0:8:0:./.:.:.:.:.:.
chr2	1735054	HG3_Ill_GATKHCSBGrefine_995	ACTTCCTGGACATGCAGCTGACCTCCGCATCCCAGCACCCTTGCATCTGGG	A	20	PASS	ClusterIDs=HG3_Ill_Spiral_1551:HG2_PB_pbsv_1550:HG2_PB_HySA_2861:HG4_PB_assemblyticsfalcon_12783:HG4_Ill_svaba_1834:HG4_Ill_scalpel_1357:HG4_Ill_SVrefine2DISCOVARDovetail_1081:HG4_Ill_Krunchall_2088:HG4_Ill_GATKHC_2376:HG4_Ill_GATKHCSBGrefine_1019:HG4_Ill_250bpfermikitraw_1948:HG3_PB_assemblyticsfalcon_13010:HG3_Ill_svaba_1861:HG3_Ill_scalpel_1503:HG3_Ill_SVrefine2DISCOVARDovetail_1046:HG3_Ill_Krunchall_2023:HG3_Ill_GATKHC_2456:HG3_Ill_GATKHCSBGrefine_995:HG3_Ill_250bpfermikitraw_1968:HG3_Ill_150bpfermikitraw_1868:HG2_PB_SVrefine2PBcRplusDovetail_5434:HG2_PB_SVrefine2PB10Xhap12_1241:HG2_PB_SVrefine2Falcon2Bionano_527:HG2_PB_SVrefine2Falcon1plusDovetail_5895:HG2_Ill_svaba_1817:HG2_Ill_SpiralSDKrefine_8116:HG2_Ill_SVrefine2DISCOVARplusDovetail_6289:HG2_Ill_Krunchall_1995:HG2_Ill_GATKHC_2380:HG2_Ill_GATKHCSBGrefine_989:HG2_Ill_250bpfermikitraw_1972:HG2_Ill_150bpfermikitraw_1798:HG2_10X_SVrefine210Xhap12_1173:HG4_Ill_Spiral_108;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1173:HG2_Ill_150bpfermikitraw_1798:HG2_Ill_250bpfermikitraw_1972:HG2_Ill_GATKHCSBGrefine_989:HG2_Ill_GATKHC_2380:HG2_Ill_Krunchall_1995:HG2_Ill_SVrefine2DISCOVARplusDovetail_6289:HG2_Ill_SpiralSDKrefine_8116:HG2_Ill_svaba_1817:HG2_PB_SVrefine2Falcon1plusDovetail_5895:HG2_PB_SVrefine2Falcon2Bionano_527:HG2_PB_SVrefine2PB10Xhap12_1241:HG2_PB_SVrefine2PBcRplusDovetail_5434:HG3_Ill_150bpfermikitraw_1868:HG3_Ill_250bpfermikitraw_1968:HG3_Ill_GATKHCSBGrefine_995:HG3_Ill_GATKHC_2456:HG3_Ill_Krunchall_2023:HG3_Ill_SVrefine2DISCOVARDovetail_1046:HG3_Ill_scalpel_1503:HG3_Ill_svaba_1861:HG3_PB_assemblyticsfalcon_13010:HG4_Ill_250bpfermikitraw_1948:HG4_Ill_GATKHCSBGrefine_1019:HG4_Ill_GATKHC_2376:HG4_Ill_Krunchall_2088:HG4_Ill_SVrefine2DISCOVARDovetail_1081:HG4_Ill_scalpel_1357:HG4_Ill_svaba_1834:HG4_PB_assemblyticsfalcon_12783;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0384615;PBcalls=8;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=102;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=50;REFWIDENED=2:1735055-1735154;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1840.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:61:1/1:0:7:1:8:1/1:0:14:0:7:1/1:0:53:./.:.:.:.:.:.
chr2	1826537	HG2_Ill_SpiralSDKrefine_8117	GGTGAAACCCTCCTCTCCTGTGAAGGAGCCACTGCCTCACCAGGGCTGCTGTGTCCACA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_1550:HG3_PB_HySA_2299:HG2_PB_HySA_2863:HG2_PB_PB10Xdip_16661:HG4_PB_pbsv_1559:HG2_PB_assemblyticsPBcR_12549:HG4_Ill_svaba_1838:HG4_Ill_manta_360:HG4_Ill_Krunchall_2089:HG4_Ill_GATKHC_2379:HG4_Ill_GATKHCSBGrefine_1022:HG4_Ill_Cortex_1700:HG4_Ill_250bpfermikitraw_1949:HG4_Ill_150bpfermikitraw_1882:HG3_Ill_svaba_1862:HG3_Ill_Krunchall_2024:HG3_Ill_GATKHC_2457:HG3_Ill_GATKHCSBGrefine_996:HG3_Ill_Cortex_1748:HG3_Ill_250bpfermikitraw_1969:HG3_Ill_150bpfermikitraw_1869:HG2_PB_pbsv_1552:HG2_Ill_svaba_1818:HG2_Ill_SpiralSDKrefine_8117:HG2_Ill_Krunchall_1996:HG2_Ill_GATKHC_2381:HG2_Ill_GATKHCSBGrefine_990:HG2_Ill_Cortex_4064:HG2_Ill_250bpfermikitraw_1973:HG2_Ill_150bpfermikitraw_1799;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1799:HG2_Ill_250bpfermikitraw_1973:HG2_Ill_Cortex_4064:HG2_Ill_GATKHCSBGrefine_990:HG2_Ill_GATKHC_2381:HG2_Ill_Krunchall_1996:HG2_Ill_SpiralSDKrefine_8117:HG2_Ill_svaba_1818:HG2_PB_pbsv_1552:HG3_Ill_150bpfermikitraw_1869:HG3_Ill_250bpfermikitraw_1969:HG3_Ill_Cortex_1748:HG3_Ill_GATKHCSBGrefine_996:HG3_Ill_GATKHC_2457:HG3_Ill_Krunchall_2024:HG3_Ill_svaba_1862:HG4_Ill_150bpfermikitraw_1882:HG4_Ill_250bpfermikitraw_1949:HG4_Ill_Cortex_1700:HG4_Ill_GATKHCSBGrefine_1022:HG4_Ill_GATKHC_2379:HG4_Ill_Krunchall_2089:HG4_Ill_manta_360:HG4_Ill_svaba_1838;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0677966;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.0862069;PBcalls=7;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=24511;DistForward=6426;DistMin=6426;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=34;REFWIDENED=2:1826523-1826614;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1841.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:36:0|1:23:1:1:34:1|0:0:15:21:0:0/1:32:29:./.:.:.:.:.:.
chr2	1852047	HG4_Ill_GATKHCSBGrefine_1023	ACAGACACCACGGAAGCGCGAGGCATTTGTCCTGGGAGCAGGAGGAAGAATTC	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_1800:HG2_PB_HySA_2867:HG3_PB_pbsv_1552:HG4_PB_pbsv_1562:HG2_PB_pbsv_1555:HG4_PB_assemblyticsfalcon_12788:HG4_Ill_svaba_1840:HG4_Ill_Krunchall_2090:HG4_Ill_GATKHC_2382:HG4_Ill_GATKHCSBGrefine_1023:HG4_Ill_Cortex_1701:HG4_Ill_250bpfermikitraw_1951:HG4_Ill_150bpfermikitraw_1883:HG3_PB_assemblyticsfalcon_13013:HG3_Ill_svaba_1864:HG3_Ill_Krunchall_2025:HG3_Ill_GATKHC_2459:HG3_Ill_GATKHCSBGrefine_998:HG3_Ill_Cortex_1749:HG3_Ill_250bpfermikitraw_1970:HG3_Ill_150bpfermikitraw_1870:HG2_Ill_svaba_1820:HG2_Ill_manta_411:HG2_Ill_SpiralSDKrefine_8118:HG2_Ill_Krunchall_1997:HG2_Ill_GATKHC_2383:HG2_Ill_GATKHCSBGrefine_991:HG2_Ill_Cortex_4065:HG2_Ill_250bpfermikitraw_1975;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1800:HG4_PB_assemblyticsfalcon_12788:HG4_Ill_svaba_1840:HG4_Ill_Krunchall_2090:HG4_Ill_GATKHC_2382:HG4_Ill_GATKHCSBGrefine_1023:HG4_Ill_Cortex_1701:HG4_Ill_250bpfermikitraw_1951:HG4_Ill_150bpfermikitraw_1883:HG3_PB_assemblyticsfalcon_13013:HG3_Ill_svaba_1864:HG3_Ill_Krunchall_2025:HG3_Ill_GATKHC_2459:HG3_Ill_GATKHCSBGrefine_998:HG3_Ill_Cortex_1749:HG3_Ill_250bpfermikitraw_1970:HG3_Ill_150bpfermikitraw_1870:HG2_Ill_svaba_1820:HG2_Ill_manta_411:HG2_Ill_SpiralSDKrefine_8118:HG2_Ill_Krunchall_1997:HG2_Ill_GATKHC_2383:HG2_Ill_GATKHCSBGrefine_991:HG2_Ill_Cortex_4065:HG2_Ill_250bpfermikitraw_1975;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0192308;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0571429;PBcalls=6;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=-32;DistForward=1854;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=106;REFWIDENED=2:1852018-1852175;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1842.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:0|1:25:5:5:17:1|0:0:16:21:1:0/1:29:20:./.:.:.:.:.:.
chr2	2239122	HG2_Ill_SpiralSDKrefine_8120	GAGCTTCCCCTTAGAGGGGTGTGTGTAGAGGGGTGTGTGTAGCTGGTTAGCTGGTTGGCATCTTCCTCAC	G	20	PASS	ClusterIDs=HG4_PB_HySA_2287:HG4_PB_pbsv_1566:HG2_PB_pbsv_1559:HG2_PB_HySA_2871:HG2_PB_assemblyticsPBcR_12555:HG4_Ill_scalpel_1362:HG4_Ill_manta_362:HG4_Ill_GATKHC_2386:HG4_Ill_GATKHCSBGrefine_1024:HG4_Ill_250bpfermikitraw_1955:HG4_Ill_150bpfermikitraw_1887:HG2_Ill_scalpel_1411:HG2_Ill_manta_413:HG2_Ill_SpiralSDKrefine_8120:HG2_Ill_Krunchall_2000:HG2_Ill_GATKHC_2387:HG2_Ill_GATKHCSBGrefine_992:HG2_Ill_250bpfermikitraw_1977:HG2_Ill_150bpfermikitraw_1802;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1802:HG2_Ill_250bpfermikitraw_1977:HG2_Ill_GATKHCSBGrefine_992:HG2_Ill_GATKHC_2387:HG2_Ill_Krunchall_2000:HG2_Ill_SpiralSDKrefine_8120:HG2_Ill_manta_413:HG2_Ill_scalpel_1411:HG4_Ill_150bpfermikitraw_1887:HG4_Ill_250bpfermikitraw_1955:HG4_Ill_GATKHCSBGrefine_1024:HG4_Ill_GATKHC_2386:HG4_Ill_manta_362:HG4_Ill_scalpel_1362;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0285714;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.0289855;PBcalls=5;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-69;DistBack=25715;DistForward=618;DistMin=618;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=209;REFWIDENED=2:2238939-2239216;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1843.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:23:0|1:21:1:1:21:1|0:0:17:35:1:0/1:22:14:./.:.:.:.:.:.
chr2	2724883	HG3_PB_assemblyticsfalcon_13033	TCTCCACACCCTGGCCATGCTGCCGACACCTGCACCTCCACACCCTGGCCATGCTGCCGACACCTGCAC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_1575:HG2_PB_assemblyticsPBcR_12566:HG3_PB_pbsv_1565:HG3_PB_HySA_2324:HG2_PB_HySA_2884:HG4_PB_assemblyticsfalcon_12803:HG4_Ill_GATKHCSBGrefine_1030:HG4_Ill_150bpfermikitraw_1895:HG3_PB_assemblyticsfalcon_13033:HG2_PB_pbsv_1570:HG2_PB_assemblyticsfalcon_12976:HG2_Ill_250bpfermikitraw_1987;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1987:HG2_PB_assemblyticsfalcon_12976:HG2_PB_pbsv_1570:HG3_PB_assemblyticsfalcon_13033:HG4_Ill_150bpfermikitraw_1895:HG4_Ill_GATKHCSBGrefine_1030:HG4_PB_assemblyticsfalcon_12803;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0289855;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.0441176;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-68;DistBack=-25;DistForward=88;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=84;REFWIDENED=2:2724882-2725036;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1844.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:49:1/1:4:23:0:11:./.:1:4:0:2:./.:0:2:./.:.:.:.:.:.
chr2	2798772	HG2_10X_allpass_230	GCCCTCCCTTGAGTGACCGGAAGGGCTGCCTTGTGCTCCCTCAGTGACCGGAAGGGCTGCCTTGCGATCCCGTCTAAGTGCCCTTCCCACCTGCCACTAGGACTCATGTCCTGAGGTTTTTCTGAGCCCATCTGCACCTCCCAGCACATGAAGGCATCTCTGCCTCCCTAGACCTCTCCCTTGAGCCCCACAGTACCTGGTCTCACCCCTCTTGTCACACCTGGTGCAGAAATGACATGCAGTGTTTGTGGAGTTGCCCCCTTAACTTTGGCATAGGGCTAGCTGCATTCCTGGCACACAGGAGATGCCAGATGCCATTTAACATGGGAGCCATCTGATGAGCGCTCCCACTTGGGCAGGCAAGGGCTCCAGCCATGGAATCACAGCCTCTTCCACGGGCAATGGAGACACAGTCCGTGGTGCAGGTGTGCGTGGAGGATACCCAGAGGTCCTCCTACATCACCTGATGCC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_1582:HG3_PB_HySA_2331:HG4_PB_SVrefine2PBcRDovetail_855:HG4_10X_allpass_260:HG2_PB_HySA_2890:HG2_PB_assemblyticsfalcon_12982:HG2_PB_assemblyticsPBcR_12572:HG3_PB_assemblyticsfalcon_13041:HG4_Ill_Spiral_110:HG3_Ill_Spiral_1567:HG3_Ill_MetaSV_2563:HG2_Ill_tnscope_164:HG2_Ill_Spiral_82:HG2_Ill_MetaSV_2416:HG4_PB_SVrefine2Falcon1Dovetail_991:HG4_Ill_manta_366:HG3_PB_SVrefine2PBcRDovetail_852:HG3_PB_SVrefine2Falcon1Dovetail_983:HG3_Ill_manta_320:HG3_Ill_SVrefine2DISCOVARDovetail_1053:HG3_Ill_GATKHCSBGrefine_1011:HG3_10X_allpass_279:HG2_PB_SVrefine2PBcRplusDovetail_5447:HG2_PB_SVrefine2PB10Xhap12_1257:HG2_PB_SVrefine2Falcon2Bionano_540:HG2_PB_SVrefine2Falcon1plusDovetail_5905:HG2_Ill_manta_417:HG2_Ill_SpiralSDKrefine_8127:HG2_Ill_SVrefine2DISCOVARplusDovetail_6300:HG2_Ill_GATKHCSBGrefine_1003:HG2_10X_allpass_230:HG2_10X_SVrefine210Xhap12_1196:HG4_Ill_Krunchall_2100:HG3_PB_pbsv_1570:HG2_PB_pbsv_1578:HG2_Ill_Krunchall_2012;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1196:HG2_10X_allpass_230:HG2_Ill_GATKHCSBGrefine_1003:HG2_Ill_SVrefine2DISCOVARplusDovetail_6300:HG2_Ill_SpiralSDKrefine_8127:HG2_Ill_manta_417:HG2_PB_SVrefine2Falcon1plusDovetail_5905:HG2_PB_SVrefine2Falcon2Bionano_540:HG2_PB_SVrefine2PB10Xhap12_1257:HG2_PB_SVrefine2PBcRplusDovetail_5447:HG3_10X_allpass_279:HG3_Ill_GATKHCSBGrefine_1011:HG3_Ill_SVrefine2DISCOVARDovetail_1053:HG3_Ill_manta_320:HG3_PB_SVrefine2Falcon1Dovetail_983:HG3_PB_SVrefine2PBcRDovetail_852:HG4_Ill_manta_366:HG4_PB_SVrefine2Falcon1Dovetail_991;NumExactMatchSVs=18;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.105263;PBcalls=16;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-470;DistBack=36;DistForward=-451;DistMin=-451;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:2798773-2799244;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1846.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:1:31:0:32:1/1:0:17:0:20:1/1:0:25:./.:2:13:.:.:.
chr2	3250756	HG2_Ill_svaba_1848	GGAGGGAGAGAGCGAGGGAGGAGAGAGCGAGGGAGGGAGAGAGCGAGGGAGGGAGAGAGGGAGGGAGAGAGGGAGGGAGA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_1594:HG4_PB_HySA_2335:HG4_Ill_svaba_1865:HG2_Ill_svaba_1848:HG2_PB_HySA_2924:HG4_PB_pbsv_1599;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_svaba_1848:HG4_Ill_svaba_1865;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0886076;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-79;DistBack=-1;DistForward=18025;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=2:3250755-3250843;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1847.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:42:1/1:6:29:0:6:./.:0:0:0:11:./.:0:5:./.:.:.:.:.:.
chr2	3308155	HG2_PB_SVrefine2PB10Xhap12_1269	GCAGTTCAGCCCTCCACTCCCGTCCTGTTCAACCCTCCACTCCCGTCCAATTCAGCCCTTCAGTCCCGTCCAATTCAGCCCTCCACTCCCGTCCAGTTCAGCCCTCCAGTCCCATCAGTTCAGCCCTCCACTCCCGTCCAGTTCAACCCTCCAATCCCATC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5915:HG4_PB_assemblyticsfalcon_12842:HG4_PB_SVrefine2Falcon1Dovetail_1003:HG3_PB_HySA_2353:HG4_PB_HySA_2336:HG3_PB_HySA_2352:HG2_PB_HySA_2926:HG2_PB_pbsv_1595:HG3_PB_pbsv_1588:HG4_PB_pbsv_1600:HG3_Ill_GATKHC_2511:HG2_Ill_scalpel_1435:HG2_Ill_GATKHC_2428:HG2_Ill_GATKHCSBGrefine_1013:HG4_PB_SVrefine2PBcRDovetail_866:HG3_PB_SVrefine2Falcon1Dovetail_995:HG2_PB_SVrefine2PBcRplusDovetail_5456:HG2_PB_SVrefine2PB10Xhap12_1269:HG2_PB_SVrefine2Falcon2Bionano_549;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5915:HG4_PB_SVrefine2PBcRDovetail_866:HG3_PB_SVrefine2Falcon1Dovetail_995:HG2_PB_SVrefine2PBcRplusDovetail_5456:HG2_PB_SVrefine2PB10Xhap12_1269:HG2_PB_SVrefine2Falcon2Bionano_549;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0124611;ClusterMaxSizeDiff=0.0124224;ClusterMaxEditDist=0.0807453;PBcalls=15;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-160;DistBack=2957;DistForward=-161;DistMin=-161;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1033;REFWIDENED=2:3308156-3309348;PctSeqSimilarity=0.9286;PctSizeSimilarity=1;PctRecOverlap=0.6149;SizeDiff=0;StartDistance=-62;EndDistance=-62;GTMatch=0;TruScore=84;MatchId=1848.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:1:21:0:9:./.:2:0:11:1:0/1:17:3:./.:.:.:.:.:.
chr2	4613730	HG2_Ill_manta_421	CTATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_1618:HG2_PB_HySA_2963:HG3_Ill_svaba_1927:HG3_Ill_scalpel_1547:HG3_Ill_manta_326:HG3_Ill_Krunchall_2073:HG3_Ill_GATKHC_2547:HG3_Ill_GATKHCSBGrefine_1027:HG3_Ill_250bpfermikitraw_2027:HG3_Ill_150bpfermikitraw_1926:HG3_10X_allpass_285:HG2_Ill_svaba_1879:HG2_Ill_scalpel_1450:HG2_Ill_manta_421:HG2_Ill_Krunchall_2043:HG2_Ill_GATKHC_2454:HG2_Ill_GATKHCSBGrefine_1018:HG2_Ill_250bpfermikitraw_2025:HG2_Ill_150bpfermikitraw_1852:HG3_PB_pbsv_1612:HG2_PB_assemblyticsfalcon_13046:HG2_PB_assemblyticsPBcR_12624:HG2_Ill_SpiralSDKrefine_8156;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1852:HG2_Ill_250bpfermikitraw_2025:HG2_Ill_GATKHCSBGrefine_1018:HG2_Ill_GATKHC_2454:HG2_Ill_Krunchall_2043:HG2_Ill_manta_421:HG2_Ill_scalpel_1450:HG2_Ill_svaba_1879:HG3_10X_allpass_285:HG3_Ill_150bpfermikitraw_1926:HG3_Ill_250bpfermikitraw_2027:HG3_Ill_GATKHCSBGrefine_1027:HG3_Ill_GATKHC_2547:HG3_Ill_Krunchall_2073:HG3_Ill_manta_326:HG3_Ill_scalpel_1547:HG3_Ill_svaba_1927;NumExactMatchSVs=17;ClusterMaxShiftDist=0.259542;ClusterMaxSizeDiff=0.259542;ClusterMaxEditDist=0.259542;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-56;DistBack=2188;DistForward=19190;DistMin=2188;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:4613729-4613787;PctSeqSimilarity=0.8793;PctSizeSimilarity=0.8;PctRecOverlap=0.0986;SizeDiff=-14;StartDistance=64;EndDistance=50;GTMatch=0;TruScore=59;MatchId=1849.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:40:0|1:14:2:2:38:./.:3:11:22:1:0/1:31:11:./.:.:.:.:.:.
chr2	4781283	HG3_Ill_SVrefine2DISCOVARDovetail_1082	CAAAACAAGAAAAAAAAAAGATACTGCAGAGAGCACCGAGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGGCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTTCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATAGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCATTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGAATGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1222:HG2_10X_allpass_235:HG3_PB_pbsv_1616:HG2_PB_assemblyticsPBcR_12628:HG4_PB_pbsv_1628:HG4_Ill_Krunchall_2134:HG4_10X_allpass_264:HG3_10X_allpass_286:HG4_PB_assemblyticsfalcon_12875:HG3_PB_assemblyticsfalcon_13098:HG2_PB_assemblyticsfalcon_13049:HG4_PB_HySA_2377:HG2_Ill_tnscope_167:HG4_Ill_MetaSV_2504:HG4_Ill_GATKHCSBGrefine_1059:HG3_Ill_MetaSV_2570:HG3_Ill_GATKHCSBGrefine_1031:HG2_Ill_MetaSV_2423:HG2_Ill_GATKHCSBGrefine_1019:HG2_Ill_breakscan11_211:HG4_PB_SVrefine2Falcon1Dovetail_1022:HG2_PB_pbsv_1622:HG2_PB_SVrefine2Falcon2Bionano_563:HG4_PB_SVrefine2PBcRDovetail_879:HG4_Ill_SVrefine2DISCOVARDovetail_1112:HG3_PB_SVrefine2PBcRDovetail_874:HG3_PB_SVrefine2Falcon1Dovetail_1014:HG3_Ill_SVrefine2DISCOVARDovetail_1082:HG2_PB_SVrefine2PBcRplusDovetail_5473:HG2_PB_SVrefine2PB10Xhap12_1290:HG2_PB_SVrefine2Falcon1plusDovetail_5931:HG2_Ill_SVrefine2DISCOVARplusDovetail_6320;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1222:HG4_PB_SVrefine2PBcRDovetail_879:HG4_Ill_SVrefine2DISCOVARDovetail_1112:HG3_PB_SVrefine2PBcRDovetail_874:HG3_PB_SVrefine2Falcon1Dovetail_1014:HG3_Ill_SVrefine2DISCOVARDovetail_1082:HG2_PB_SVrefine2PBcRplusDovetail_5473:HG2_PB_SVrefine2PB10Xhap12_1290:HG2_PB_SVrefine2Falcon1plusDovetail_5931:HG2_Ill_SVrefine2DISCOVARplusDovetail_6320;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00908565;ClusterMaxSizeDiff=0.00908565;ClusterMaxEditDist=0.00908565;PBcalls=16;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-6065;DistBack=657;DistForward=-6039;DistMin=-6039;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=27;REFWIDENED=2:4781284-4787375;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0.9987;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=99;MatchId=1850.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:112:1/1:0:31:1:22:./.:1:20:1:28:./.:2:36:1/1:0:409:6138:.:.
chr2	5209176	HG4_PB_SVrefine2Falcon1Dovetail_1024	CAAAATGAAAATCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_1629:HG3_PB_HySA_2405:HG4_Ill_Krunchall_2138:HG3_PB_pbsv_1619:HG3_Ill_Krunchall_2078:HG2_Ill_Krunchall_2049:HG4_PB_assemblyticsfalcon_12879:HG3_PB_assemblyticsfalcon_13103:HG4_Ill_Spiral_113:HG3_Ill_Spiral_1610:HG2_PB_HySA_2976:HG2_Ill_Spiral_85:HG4_Ill_MetaSV_2505:HG2_Ill_tnscope_168:HG2_Ill_MetaSV_2424:HG2_PB_assemblyticsfalcon_13053:HG4_PB_SVrefine2PBcRDovetail_880:HG4_PB_SVrefine2Falcon1Dovetail_1024:HG4_Ill_scalpel_1390:HG4_Ill_SVrefine2DISCOVARDovetail_1113:HG4_Ill_GATKHCSBGrefine_1060:HG4_10X_allpass_265:HG3_PB_SVrefine2Falcon1Dovetail_1017:HG3_Ill_SVrefine2DISCOVARDovetail_1084:HG3_Ill_MetaSV_2571:HG3_Ill_GATKHCSBGrefine_1032:HG3_10X_allpass_287:HG2_PB_pbsv_1624:HG2_PB_SVrefine2PB10Xhap12_1292:HG2_PB_SVrefine2Falcon1plusDovetail_5934:HG2_Ill_manta_422:HG2_Ill_breakscan11_212:HG2_Ill_SVrefine2DISCOVARplusDovetail_6321:HG2_Ill_GATKHCSBGrefine_1020:HG2_10X_allpass_236:HG2_10X_SVrefine210Xhap12_1223;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1223:HG2_10X_allpass_236:HG2_Ill_GATKHCSBGrefine_1020:HG2_Ill_SVrefine2DISCOVARplusDovetail_6321:HG2_Ill_breakscan11_212:HG2_Ill_manta_422:HG2_PB_SVrefine2Falcon1plusDovetail_5934:HG2_PB_SVrefine2PB10Xhap12_1292:HG2_PB_pbsv_1624:HG3_10X_allpass_287:HG3_Ill_GATKHCSBGrefine_1032:HG3_Ill_MetaSV_2571:HG3_Ill_SVrefine2DISCOVARDovetail_1084:HG3_PB_SVrefine2Falcon1Dovetail_1017:HG4_10X_allpass_265:HG4_Ill_GATKHCSBGrefine_1060:HG4_Ill_SVrefine2DISCOVARDovetail_1113:HG4_Ill_scalpel_1390:HG4_PB_SVrefine2Falcon1Dovetail_1024:HG4_PB_SVrefine2PBcRDovetail_880;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0959752;ClusterMaxSizeDiff=0.0959752;ClusterMaxEditDist=0.0959752;PBcalls=13;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-131;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=2:5209177-5209516;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1851.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:34:./.:30:8:10:21:1|0:0:22:46:1:0/1:23:22:0/1:31:6:.:.:.
chr2	5487768	HG2_Ill_SVrefine2DISCOVARplusDovetail_6322	TTCTTCTGAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTG	T	20	PASS	ClusterIDs=HG2_PB_HySA_2978:HG2_PB_assemblyticsPBcR_12633:HG2_PB_SVrefine2PBcRplusDovetail_5476:HG4_Ill_Krunchall_2142:HG2_Ill_Krunchall_2054:HG2_Ill_Krunchall_2053:HG2_Ill_breakscan11_213:HG2_PB_pbsv_1625:HG3_PB_pbsv_1620:HG4_PB_pbsv_1630:HG4_PB_SVrefine2PBcRDovetail_882:HG4_PB_HySA_2384:HG4_Ill_manta_374:HG4_Ill_SVrefine2DISCOVARDovetail_1115:HG4_Ill_GATKHCSBGrefine_1061:HG4_10X_allpass_266:HG3_PB_SVrefine2PBcRDovetail_877:HG3_Ill_scalpel_1554:HG3_Ill_manta_327:HG3_Ill_SVrefine2DISCOVARDovetail_1087:HG3_Ill_MetaSV_2572:HG3_Ill_GATKHCSBGrefine_1033:HG3_10X_allpass_288:HG2_PB_SVrefine2PB10Xhap12_1293:HG2_PB_SVrefine2Falcon1plusDovetail_5935:HG2_Ill_scalpel_1454:HG2_Ill_manta_423:HG2_Ill_SVrefine2DISCOVARplusDovetail_6322:HG2_Ill_GATKHCSBGrefine_1021:HG2_10X_allpass_237:HG2_10X_SVrefine210Xhap12_1226:HG4_Ill_MetaSV_2506:HG2_Ill_tnscope_169:HG2_Ill_MetaSV_2425;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1226:HG2_10X_allpass_237:HG2_Ill_GATKHCSBGrefine_1021:HG2_Ill_SVrefine2DISCOVARplusDovetail_6322:HG2_Ill_manta_423:HG2_Ill_scalpel_1454:HG2_PB_SVrefine2Falcon1plusDovetail_5935:HG2_PB_SVrefine2PB10Xhap12_1293:HG3_10X_allpass_288:HG3_Ill_GATKHCSBGrefine_1033:HG3_Ill_MetaSV_2572:HG3_Ill_SVrefine2DISCOVARDovetail_1087:HG3_Ill_manta_327:HG3_Ill_scalpel_1554:HG3_PB_SVrefine2PBcRDovetail_877:HG4_10X_allpass_266:HG4_Ill_GATKHCSBGrefine_1061:HG4_Ill_SVrefine2DISCOVARDovetail_1115:HG4_Ill_manta_374:HG4_PB_HySA_2384:HG4_PB_SVrefine2PBcRDovetail_882:HG4_PB_pbsv_1630;NumExactMatchSVs=22;ClusterMaxShiftDist=0.157996;ClusterMaxSizeDiff=0.157996;ClusterMaxEditDist=0.157996;PBcalls=11;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-267;DistBack=12766;DistForward=54134;DistMin=12766;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=2:5487769-5488049;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1852.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:61:46:0|1:45:5:9:38:1|0:0:14:26:0:0/1:19:19:./.:.:.:.:.:.
chr2	5614809	HG2_PB_assemblyticsfalcon_13056	ACACCCACCTGCCAGGTTCACGCCCGCCCACATCCACCTGCCTCGCCCCACCCACCTGCCTCGCCC	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_2034:HG2_PB_HySA_2980:HG4_PB_HySA_2386:HG4_PB_assemblyticsfalcon_12882:HG3_PB_assemblyticsfalcon_13106:HG3_PB_pbsv_1621:HG2_PB_pbsv_1626:HG4_PB_pbsv_1631:HG4_Ill_GATKHCSBGrefine_1062:HG4_Ill_250bpfermikitraw_2008:HG3_PB_HySA_2408:HG3_Ill_GATKHCSBGrefine_1034:HG3_Ill_250bpfermikitraw_2036:HG2_PB_assemblyticsfalcon_13056:HG2_PB_assemblyticsPBcR_12635:HG2_Ill_Krunchall_2055:HG2_Ill_GATKHCSBGrefine_1022;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2034:HG4_Ill_GATKHCSBGrefine_1062:HG4_Ill_250bpfermikitraw_2008:HG3_PB_HySA_2408:HG3_Ill_GATKHCSBGrefine_1034:HG3_Ill_250bpfermikitraw_2036:HG2_PB_assemblyticsfalcon_13056:HG2_PB_assemblyticsPBcR_12635:HG2_Ill_Krunchall_2055:HG2_Ill_GATKHCSBGrefine_1022;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0775194;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.110236;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-65;DistBack=57843;DistForward=13808;DistMin=13808;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=43;REFWIDENED=2:5614808-5614918;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1853.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:56:1/1:2:25:3:23:1/1:0:9:1:7:1/1:0:14:./.:.:.:.:.:.
chr2	6400508	HG4_Ill_MetaSV_2507	CTTTTAAGTCCAAGTGACAGACAGGAAAGTTGTGCTTCTGTTTGGCAGAAAGGCAGCGACTTGGGTTGATGCTGGAGTAGAATAAGCGTTCCGATGGGCATCGTGGGTGTAAGCAGTGGAGGAAGGGAATACATTTGAGCAGCTTTGGGAGTGAAATCACAGATGAGAAAAAACAAAGAGAAAATACAAAATTGGGGGATGGATTGTGATATGATCAAGATATAGAAAGAAGGAAATAAAAAGGATGAATTATGATATGATCAAGATATAAAAAGAAGGAAATAAAAAGGATGAATTGTGATATGATCAAGATATAAAAAGATAGATCAAGATATAGAAAGAAGGAAATAAAAAGGATGAATTGTGATATGATCAAGATATAAAAAGATCAAGATATAGAAAGAAGGAAATAAAAAGGATGAATTGTGATATGATCAAGATATAAAAAGATCAAGATATAGAAAGAAGGAAATAAAAAGGATGAATTGTGATATGATCAAGATATAAAAATATAGATCAAGGTATAGAAAGAAGGAAATAAAAAGGTAATGTACAAATGTGTATTGGTCTTGGAAGTTGGAAGGAATAAAATGGAGGCCCATGAATAAAGGCGGACTTGACTGAGTGTTAAAGCAGGCAACTGTCCTGATCTAACTAGACTTGTGGGATTGCATAGCAACAAAATAGTTTCTTCAATAATTTCTAACTATAAAGTGCACCTTCAACAACTAAATATGAGTTGATTCTTCCCTTTCATAATTTGTCAGTTTCACACAGCGTGGCTTTGCTTTGTTACACAAAAACCAAACACACCCCCTTTCCAGATCTCTTTTGGTAGACCTATTATTTTCCTTGTATGCTATGACAATGGCTTTTCTACAATATATGAAAATTAGTCTCACCACTGAAATGTACACATTTTCAATTTATGGTCTTCATTCTTACAGTATTTATACTTCTAATTTTGATTTAAGAAATAATCTGCTTTTTATTTAAATTTTGTTCCTATATGTTATCTTTAAATTTTATTTTTACATTAAAAAATAAAAATCACAAATTTATTTCTTGTATTTACCTCCCCCACCCAAGGACTCAAACTCACACAACTTTTTGACAATCATTCATCTTTTATGTGACTACATGCTTCACTCTGCATGTATTCAGATAGAGGTGAAAACCTCTGCCAGTTATTGATTTAGTTAACAATTATTCATTACGTGCATACTAAATTCTAAGGGAGGAAAAAGCAAACCCAATCCCTAAGTTTATGCCATTTATTTTCTCCAAGCTGTTTGAGTTTACTTTACACCTCACCCTTCTCAGCCTGACCTACATTCACACCAAACTACTCACTCCATGCACTTTGCACATGCTGTTCCCACCTTCTAAGCATCCTTCCATATACTCCATGCTAGCAAAGGTGCTGCCTTTTTTGAACCCAGTTTCTGGGCAGCGAAGACTTCCTTTATTTTCTAAGATACCTTCTCATGCTTCAGCATTGCCTCCCCCTCCATTGTTCTAGGTATCACAGAGAGTGATATACAGTCATATTCACAAGTTCCTTCTTTACTTAGGCTCTGAACTCCTCAAGGAAGTAATGTTTTACACTGTTGCTGGTAACTTCTTCCAGGATTAGAACAGTGCTTAGCACATGAAAGACCCTCAAATATGATTTCTAAAGAAATA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_1634:HG4_PB_pbsv_1639:HG2_10X_allpass_238:HG2_Ill_MetaSV_2427:HG2_Ill_tnscope_170:HG4_PB_SVrefine2Falcon1Dovetail_1030:HG4_Ill_MetaSV_2507:HG3_PB_SVrefine2Falcon1Dovetail_1022:HG2_PB_SVrefine2PB10Xhap12_1300:HG2_PB_SVrefine2Falcon2Bionano_568:HG2_PB_SVrefine2Falcon1plusDovetail_5939:HG2_Ill_breakscan11_215:HG2_Ill_SVrefine2DISCOVARplusDovetail_6327:HG4_Ill_Krunchall_2153:HG4_PB_assemblyticsfalcon_12895:HG3_PB_assemblyticsfalcon_13118:HG2_PB_assemblyticsfalcon_13068;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6327:HG2_Ill_breakscan11_215:HG2_PB_SVrefine2Falcon1plusDovetail_5939:HG2_PB_SVrefine2Falcon2Bionano_568:HG2_PB_SVrefine2PB10Xhap12_1300:HG3_PB_SVrefine2Falcon1Dovetail_1022:HG4_Ill_MetaSV_2507:HG4_PB_SVrefine2Falcon1Dovetail_1030;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00653789;ClusterMaxSizeDiff=0.00653789;ClusterMaxEditDist=0.00653789;PBcalls=10;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-1685;DistBack=2520;DistForward=-1685;DistMin=-1685;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:6400509-6402193;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1854.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:38:./.:4:13:22:10:1|0:0:28:63:0:0/1:55:23:0/1:124:55:1688:.:.
chr2	6614028	HG3_PB_assemblyticsfalcon_13121	ATATATATATATATATATATATATGTGTGTATATATATATATATATATATATATATATATATATA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_1640:HG2_PB_assemblyticsfalcon_13070:HG4_PB_assemblyticsfalcon_12896:HG3_PB_assemblyticsfalcon_13121:HG2_PB_assemblyticsPBcR_12646:HG4_PB_HySA_2395:HG4_Ill_GATKHCSBGrefine_1067:HG3_Ill_GATKHCSBGrefine_1039:HG3_PB_HySA_2426:HG2_PB_HySA_2990:HG3_PB_pbsv_1631:HG2_PB_pbsv_1635;NumClusterSVs=12;ExactMatchIDs=HG3_PB_assemblyticsfalcon_13121:HG4_PB_assemblyticsfalcon_12896;NumExactMatchSVs=2;ClusterMaxShiftDist=0.20339;ClusterMaxSizeDiff=0.20339;ClusterMaxEditDist=0.220339;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-64;DistBack=-40;DistForward=7987;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:6614027-6614093;PctSeqSimilarity=0.932;PctSizeSimilarity=0.8906;PctRecOverlap=0.5846;SizeDiff=7;StartDistance=20;EndDistance=27;GTMatch=0;TruScore=80;MatchId=1855.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:8:74:1/1:0:21:1:13:0/0:7:0:10:0:0/1:8:1:./.:.:.:.:.:.
chr2	7075765	HG2_Ill_250bpfermikitraw_2053	AATGGGATGGCCTCTCACCTTGTGAGCTCATTTGGCTTCCAGTGTTAATGGTAACAGCATGTAG	A	20	PASS	ClusterIDs=HG2_PB_HySA_2997:HG4_PB_pbsv_1644:HG3_PB_pbsv_1638:HG2_PB_pbsv_1641:HG4_Ill_GATKHC_2486:HG4_Ill_GATKHCSBGrefine_1071:HG3_Ill_GATKHC_2582:HG3_Ill_GATKHCSBGrefine_1045:HG2_Ill_GATKHC_2489:HG2_Ill_GATKHCSBGrefine_1033:HG2_PB_PB10Xdip_17593:HG2_PB_PB10Xdip_17592:HG3_PB_assemblyticsfalcon_13126:HG2_PB_assemblyticsPBcR_12651:HG2_PB_assemblyticsfalcon_13074:HG4_Ill_Krunchall_2160:HG4_Ill_250bpfermikitraw_2025:HG3_Ill_Krunchall_2103:HG3_Ill_250bpfermikitraw_2055:HG2_Ill_Krunchall_2073:HG2_Ill_250bpfermikitraw_2053:HG2_Ill_150bpfermikitraw_1879;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1879:HG2_Ill_250bpfermikitraw_2053:HG2_Ill_Krunchall_2073:HG3_Ill_250bpfermikitraw_2055:HG3_Ill_Krunchall_2103:HG4_Ill_250bpfermikitraw_2025:HG4_Ill_Krunchall_2160;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.0983607;PBcalls=9;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-63;DistBack=25168;DistForward=96481;DistMin=25168;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=192;REFWIDENED=2:7075660-7075914;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9841;PctRecOverlap=0.9688;SizeDiff=1;StartDistance=-2;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=1856.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:62:1/1:2:20:2:27:./.:0:2:0:2:1/1:0:20:./.:.:.:.:.:.
chr2	7338579	HG2_PB_assemblyticsPBcR_12656	CCATCCATCCATCCATTCATCATGCACACATCCATCTACCCAACCATCCATCCATCCAAT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_1649:HG3_PB_pbsv_1641:HG3_PB_assemblyticsfalcon_13128:HG2_PB_assemblyticsfalcon_13081:HG4_PB_assemblyticsfalcon_12905:HG4_Ill_GATKHC_2489:HG2_PB_assemblyticsPBcR_12656:HG2_Ill_manta_430:HG2_Ill_GATKHC_2493:HG3_Ill_GATKHC_2585:HG3_Ill_GATKHCSBGrefine_1046:HG2_PB_pbsv_1647;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHC_2493:HG2_Ill_manta_430:HG2_PB_assemblyticsPBcR_12656:HG4_Ill_GATKHC_2489:HG4_PB_assemblyticsfalcon_12905;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0983607;ClusterMaxEditDist=0.198347;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=9277;DistForward=9050;DistMin=9050;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=417;REFWIDENED=2:7338296-7338771;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1857.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:45:0|1:34:2:6:43:./.:2:37:90:19:0/1:18:7:./.:.:.:.:.:.
chr2	8616794	HG2_PB_SVrefine2Falcon1plusDovetail_5947	CAGAAATGTGAGTTACAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_216:HG2_PB_assemblyticsPBcR_12667:HG3_Ill_Krunchall_2112:HG2_Ill_Krunchall_2079:HG4_PB_assemblyticsfalcon_12914:HG3_PB_assemblyticsfalcon_13136:HG2_PB_assemblyticsfalcon_13089:HG4_PB_HySA_2413:HG4_Ill_Spiral_115:HG3_PB_HySA_2447:HG3_Ill_Spiral_1638:HG2_Ill_Spiral_88:HG4_PB_pbsv_1656:HG3_PB_pbsv_1648:HG2_PB_pbsv_1653:HG2_PB_HySA_3013:HG4_Ill_MetaSV_2510:HG3_Ill_MetaSV_2577:HG2_Ill_tnscope_171:HG2_Ill_MetaSV_2430:HG4_PB_SVrefine2PBcRDovetail_892:HG4_PB_SVrefine2Falcon1Dovetail_1038:HG4_Ill_svaba_1920:HG4_Ill_scalpel_1405:HG4_Ill_SVrefine2DISCOVARDovetail_1128:HG4_Ill_GATKHCSBGrefine_1075:HG4_10X_allpass_268:HG3_PB_SVrefine2PBcRDovetail_890:HG3_PB_SVrefine2Falcon1Dovetail_1030:HG3_Ill_svaba_1969:HG3_Ill_scalpel_1577:HG3_Ill_SVrefine2DISCOVARDovetail_1104:HG3_Ill_GATKHCSBGrefine_1048:HG3_10X_allpass_290:HG2_PB_SVrefine2PBcRplusDovetail_5489:HG2_PB_SVrefine2PB10Xhap12_1312:HG2_PB_SVrefine2Falcon2Bionano_577:HG2_PB_SVrefine2Falcon1plusDovetail_5947:HG2_Ill_svaba_1911:HG2_Ill_scalpel_1472:HG2_Ill_manta_433:HG2_Ill_SVrefine2DISCOVARplusDovetail_6336:HG2_Ill_GATKHCSBGrefine_1037:HG2_10X_allpass_240:HG2_10X_SVrefine210Xhap12_1247;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1247:HG2_10X_allpass_240:HG2_Ill_GATKHCSBGrefine_1037:HG2_Ill_SVrefine2DISCOVARplusDovetail_6336:HG2_Ill_manta_433:HG2_Ill_scalpel_1472:HG2_Ill_svaba_1911:HG2_PB_SVrefine2Falcon1plusDovetail_5947:HG2_PB_SVrefine2Falcon2Bionano_577:HG2_PB_SVrefine2PB10Xhap12_1312:HG2_PB_SVrefine2PBcRplusDovetail_5489:HG3_10X_allpass_290:HG3_Ill_GATKHCSBGrefine_1048:HG3_Ill_SVrefine2DISCOVARDovetail_1104:HG3_Ill_scalpel_1577:HG3_Ill_svaba_1969:HG3_PB_SVrefine2Falcon1Dovetail_1030:HG3_PB_SVrefine2PBcRDovetail_890:HG4_10X_allpass_268:HG4_Ill_GATKHCSBGrefine_1075:HG4_Ill_SVrefine2DISCOVARDovetail_1128:HG4_Ill_scalpel_1405:HG4_Ill_svaba_1920:HG4_PB_SVrefine2Falcon1Dovetail_1038:HG4_PB_SVrefine2PBcRDovetail_892;NumExactMatchSVs=25;ClusterMaxShiftDist=0.123746;ClusterMaxSizeDiff=0.123746;ClusterMaxEditDist=0.123746;PBcalls=18;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=8367;DistForward=-289;DistMin=-289;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=2:8616795-8617120;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1858.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:26:0:22:1/1:0:23:0:18:1/1:0:42:0/1:3:11:.:.:.
chr2	9925472	HG2_10X_SVrefine210Xhap12_1252	GTACACTGTAAACATAACTATTATATGCATTGGGAAACCAAAAACATCGTGGGCCTTACTTTACGATACTTGCTTTAGTGCAGTAGTCTGGAACTGAACCTGTAATATATCCAAGGTATGCTTGTATTTGCTGTGTTCCTTTAGAAAATTACTTTTTCTCTGTTTCTCCAACTGGAAGGATTATATTAAACCTGGGGAAAGGCCCTTGAAGGACTCCATGGCACCCTCAGCGGACACTGTGGGCCTGAAAATGATATTTATTTTTTTTTTCTAGGGAACTCTTCTATTGTATACAATTTTTAAGCATTTAAGTGACAAAGAATACTATAAGCAGAATAATGTTTATTTTTAAAAAAGAAACTTAAAACAAGAAAGTAATGGTAGGAAAATGTTAACTCCTTTAGCCTATGAATTTGTTGAAAAATGAATAAAACTACTGATAGGTTCAGTTAGGAGTATCTTTTGGGTTTTTTTTTTTTGGTACGGTTTGCAAAACTCTTTTGAGGTAAATATTAGGGTGTTTTATGTAGTTCTGATAACAGTGCATAGCATATAGAAATGTTCTTTATGGTTTCTCCTGTCTCCATCTGGGCATGTCAAAGTTCAATTATGGTTTAAGCCATAGAGGACCTTTTATCACTTCTCGGCCTTTTGGCTAAGATTAAGTACAACAGTGGATCTTTTGTCTCAATCAAATTACCATACTTAACTATTTCATTCCAGAGGGCCAATGAAAAAAATGTATTTACAAGGATTATATTAAAATCATCAAGTACATGGGCCAGGCGCAGTGGCTCATGACTGTAATCCCAGCACTTTGGGATTCTGAGGCAGACAGAAGGATTCCTTGGGCACAGGAGTTCGAGACCAGCCTGGGCAACATAACAAGACCCTGTATCTACAAAAAACAAAAAAGTTAGCTGGGTGTGGTGGCACATGCCTGCAGTTCCAGCTACTCAGGGGGCTAAGGCGAGAGGTTCTCTTGAGCCCAGAAGTTTGAGGTTACAGTGAGCTATGATGGTACCACTGCACTTCAGCCTTAGCGACAGAGCGAGACCTCATCTCTTTTTCAAAAAGTTATCAAATATATAAAGAACACTATTTTAGGAAATACAGTTTTGTTTTTTTGAGACAGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCCGTGGTGTGATCTCGCCTCGCTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCTTGTGCCTCGGCCTCCCAAGTAGCTGGAATTACAGGCATGCGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGAGTTTCACCATGTTGACCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCACCTCGGCCTTCCAAAGTGCTGGGATTACAGGCGTGAACCACCGCACCCAGCTCAAAATTACTTTTAAAGGGAAAAAACAGGCAAACATCCTCTGCTGCGGGGCCAGCTGCTGTGAACGCTGAGTTATGCCTGCATGTGGCTCTGGGTCTGAGAACCCTCACAGCTTGGCCCACCTCCTCCCTGGGGACCTGATGATGCCCAGGTCCCCAGTCATCCAGGGCCGTGCAGGGACAAAGGGCCCTTCGGGAAATGCTAGAACTTAAACTCCGCTTCCCCCAGTTTCTCTCTACTGCAGTCACTTTCATTTCTTAGTTTAATGAGCTTTTTCTCCGTGGAAAGAGCTGCCAGCCACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCGCTCTGTCGCCCAGACTGGAGTGCAGCGGCGCGATCTCGGCTCACTACAAGCTCCGCCTCCTCCAGCCACCTTTCTTGAGTGGTTTCCGTAGGAGGAGGCGGTTCCCTCCAGGTTCTTCCCAAGGTCTTGGGCATCTTTCTGCAGAGTCGCGCTTCTCGGGTGTGTGGCTGACGCTTTCAGGCGCACTGGAAAGTGTCTTCTCCATTTCTAAGCAGTAAATTTCCTCTTCGATGACTTTTCTGCGAGTTTCTCCTGATGTTCTTATGGAGGGCAGGCAGGTTGGGGAGTTTCGCCTAAAGCCTCTGAGTCTCACTTGCAAGCTGTGGCCTTGCAGACTGCAAAGATGCTGGCTCAGTTTGCAGACTCTTCATTTTAACTGGAAGCGCTTCGTTTGTTTGATTTTCTTCACGTGGCTTTTATCTGGCTTTTCTCCCTCAAGCCTTCTTAAAGAATCGTCTAAGCTAACCGCATTGATCGTTTCTTCAAATCATTTTCTGACGGATTGTCTTGGTCTCCATTTTCCAATGCCCTCTTTCTGTCTGATTCCAAGCTGCGATCTTCTCTAAAGCGAGCATGACAGCTTATCTCCAGCACCGTTCAGTCAGAGGTCTCTACGGGCTCTCTGTCACCGCATCCTGTCCCATGTGTATGTTCTGGTTTCCAAGCCTTCTCTCCGTGCCTTCATGCCTTCGTTCCTGTCCTCTCGCCTTCTGTGCTGTAGTTGCTGGGGAGAACAGTTGGTATGATCTGGATGTTTTTTGGGGTTGTTTGTTTTTTGAGATGGAGTTTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCTTGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCAGCTACCACGTCTGGCTACTTTTTGTGTTTTTAGTAGAGACGGGGCTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCCGACCTCAGGGGATCCACCCACCTCGGCCTCCCAAAATACTGGGATTACAGGTGTGAGCCACCGTGCTCGGCCTGATCTGGATGTTTCCTCCCTGCAAATCTCATGTTGAAATGTGATCCCCTGTGTTAAAGGTGGGCCTGGAGGGAGGGGTTTGGGTCTTGGAGGCGGATCCCTTATGAATGGCTCGGTGCTGTCCTTGCAGTAATTACTGAGTTCTCACTCTATGAGTTCCTACCAGATCTCATTGTTTAAAAGAGCCTGGCCTCTCCCCTCTCTCTCTTGCATCTGCTCTTGCCATGTGACACACTAGCTCCCTCTTCACCTTCCACTATGACTGGAAGCTTCCTGAAGCCTCACCAGCAGCAGATGCTGGCATTGTGCTTCCTGTTCAGCCTGCAGAACTGTGAGCCAAATAAACCTCTTTTCTTTTTTTTTTTTTGACAGAGTCCTGCTCTGTCACCCAGGCTGGAGTGCAGTCGTGAGATCTCAGCTTACTGCAACCTCCACCTTCTAGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCCCGCCATCATGCTTGGCTAATTTTTTTTTTTTTTTCAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCATGATCCGCCTGCTTTGGCCTCCCAAACTCTTTTCTTTATAAATTACCCAGCCTCAGGTATTCCTTCATAGCAATGCAAAAGGAACTAATTCAGCAGTTTCAGGTTTTCCTGAAGAAGAGTGAAGATGAAGGTTTTTAACCAAACCATTGGTATTTTCTTTAGAAGTCAT	G	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2579:HG4_Ill_Krunchall_2176:HG3_Ill_Krunchall_2122:HG2_Ill_Krunchall_2091:HG4_10X_allpass_269:HG3_10X_allpass_291:HG2_10X_allpass_241:HG2_Ill_tnscope_172:HG4_PB_pbsv_1665:HG4_PB_SVrefine2PBcRDovetail_898:HG4_Ill_MetaSV_2512:HG3_PB_pbsv_1659:HG3_PB_assemblyticsfalcon_13149:HG3_PB_SVrefine2PBcRDovetail_895:HG3_Ill_SVrefine2DISCOVARDovetail_1108:HG2_PB_pbsv_1665:HG2_PB_assemblyticsfalcon_13100:HG2_PB_assemblyticsPBcR_12684:HG2_PB_SVrefine2PBcRplusDovetail_5496:HG2_PB_SVrefine2PB10Xhap12_1321:HG2_PB_SVrefine2Falcon2Bionano_583:HG2_PB_SVrefine2Falcon1plusDovetail_5954:HG2_Ill_SpiralSDKrefine_8187:HG2_Ill_SVrefine2DISCOVARplusDovetail_6343:HG2_Ill_MetaSV_2432:HG2_Ill_GATKHCSBGrefine_1038:HG2_10X_SVrefine210Xhap12_1252:HG2_Ill_breakscan11_218:HG4_PB_SVrefine2Falcon1Dovetail_1045:HG4_PB_assemblyticsfalcon_12925;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1252:HG2_Ill_GATKHCSBGrefine_1038:HG2_Ill_MetaSV_2432:HG2_Ill_SVrefine2DISCOVARplusDovetail_6343:HG2_Ill_SpiralSDKrefine_8187:HG2_PB_SVrefine2Falcon1plusDovetail_5954:HG2_PB_SVrefine2Falcon2Bionano_583:HG2_PB_SVrefine2PB10Xhap12_1321:HG2_PB_SVrefine2PBcRplusDovetail_5496:HG2_PB_assemblyticsPBcR_12684:HG2_PB_assemblyticsfalcon_13100:HG2_PB_pbsv_1665:HG3_Ill_SVrefine2DISCOVARDovetail_1108:HG3_PB_SVrefine2PBcRDovetail_895:HG3_PB_assemblyticsfalcon_13149:HG3_PB_pbsv_1659:HG4_Ill_MetaSV_2512:HG4_PB_SVrefine2PBcRDovetail_898:HG4_PB_pbsv_1665;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0354932;ClusterMaxSizeDiff=0.0354932;ClusterMaxEditDist=0.0354932;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3576;DistBack=6981;DistForward=-3571;DistMin=-3571;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:9925473-9929049;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1860.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:120:1/1:2:31:1:32:1/1:0:18:0:22:1/1:0:30:1/1:3:295:2695:.:.
chr2	9959221	HG2_PB_SVrefine2Falcon2Bionano_585	CCCCAGTTTTTTTTTTTGTTTTTTTTTTTGTTTTGTTTTGTTTTTTTTTTGTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCGAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2433:HG4_PB_assemblyticsfalcon_12927:HG3_PB_assemblyticsfalcon_13150:HG4_PB_pbsv_1666:HG3_Ill_Krunchall_2123:HG2_Ill_Krunchall_2092:HG2_PB_HySA_3043:HG4_PB_HySA_2426:HG4_Ill_Spiral_116:HG3_Ill_Spiral_1647:HG2_Ill_Spiral_89:HG3_PB_HySA_2460:HG4_PB_SVrefine2PBcRDovetail_899:HG4_PB_SVrefine2Falcon1Dovetail_1046:HG4_Ill_scalpel_1416:HG4_Ill_manta_382:HG4_Ill_SVrefine2DISCOVARDovetail_1134:HG4_Ill_GATKHCSBGrefine_1080:HG4_10X_allpass_270:HG3_PB_pbsv_1661:HG3_PB_SVrefine2PBcRDovetail_897:HG3_PB_SVrefine2Falcon1Dovetail_1034:HG3_Ill_scalpel_1589:HG3_Ill_manta_334:HG3_Ill_SVrefine2DISCOVARDovetail_1109:HG3_Ill_GATKHCSBGrefine_1050:HG3_10X_allpass_292:HG2_PB_pbsv_1667:HG2_PB_SVrefine2PBcRplusDovetail_5498:HG2_PB_SVrefine2PB10Xhap12_1323:HG2_PB_SVrefine2Falcon2Bionano_585:HG2_PB_SVrefine2Falcon1plusDovetail_5956:HG2_Ill_scalpel_1480:HG2_Ill_manta_437:HG2_Ill_breakscan11_219:HG2_Ill_SpiralSDKrefine_8188:HG2_Ill_SVrefine2DISCOVARplusDovetail_6344:HG2_Ill_GATKHCSBGrefine_1040:HG2_10X_allpass_242:HG2_10X_SVrefine210Xhap12_1254:HG4_Ill_MetaSV_2513:HG3_Ill_MetaSV_2580:HG2_Ill_tnscope_173;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1254:HG2_10X_allpass_242:HG2_Ill_GATKHCSBGrefine_1040:HG2_Ill_SVrefine2DISCOVARplusDovetail_6344:HG2_Ill_SpiralSDKrefine_8188:HG2_Ill_breakscan11_219:HG2_Ill_manta_437:HG2_Ill_scalpel_1480:HG2_PB_SVrefine2Falcon1plusDovetail_5956:HG2_PB_SVrefine2Falcon2Bionano_585:HG2_PB_SVrefine2PB10Xhap12_1323:HG2_PB_SVrefine2PBcRplusDovetail_5498:HG2_PB_pbsv_1667:HG3_10X_allpass_292:HG3_Ill_GATKHCSBGrefine_1050:HG3_Ill_SVrefine2DISCOVARDovetail_1109:HG3_Ill_manta_334:HG3_Ill_scalpel_1589:HG3_PB_SVrefine2Falcon1Dovetail_1034:HG3_PB_SVrefine2PBcRDovetail_897:HG3_PB_pbsv_1661:HG4_10X_allpass_270:HG4_Ill_GATKHCSBGrefine_1080:HG4_Ill_SVrefine2DISCOVARDovetail_1134:HG4_Ill_manta_382:HG4_Ill_scalpel_1416:HG4_PB_SVrefine2Falcon1Dovetail_1046:HG4_PB_SVrefine2PBcRDovetail_899;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0873362;ClusterMaxSizeDiff=0.0873362;ClusterMaxEditDist=0.0873362;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-350;DistBack=-351;DistForward=8990;DistMin=-351;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:9959222-9959587;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1861.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:1/1:0:14:2:23:1/1:0:15:0:26:1/1:0:51:./.:2:5:.:.:.
chr2	10727193	HG2_PB_SVrefine2PBcRplusDovetail_5505	ACATATATATACATATATATACATATATATACACATATATATACATATATATACATATATATACATATATACACATATATATACATATATACACATATATACACATATATATACACATATATATACACATATATATACACATATATATATACATATATATACATATATATATACATACATATATATATATACACATATATATATATATA	TTTTTTTTTTTTTTTT	20	PASS	ClusterIDs=HG4_PB_pbsv_1678:HG4_Ill_GATKHCSBGrefine_1088:HG2_PB_SVrefine2Falcon2Bionano_592:HG4_Ill_SVrefine2DISCOVARDovetail_1140:HG2_PB_assemblyticsPBcR_12705:HG2_PB_SVrefine2PBcRplusDovetail_5505:HG2_PB_SVrefine2PB10Xhap12_1330:HG2_Ill_SVrefine2DISCOVARplusDovetail_6349:HG4_PB_SVrefine2PBcRDovetail_904:HG4_PB_assemblyticsfalcon_12945:HG4_PB_SVrefine2Falcon1Dovetail_1051:HG3_PB_assemblyticsfalcon_13173:HG3_PB_SVrefine2Falcon1Dovetail_1042:HG4_PB_HySA_2447:HG2_PB_HySA_3064:HG2_PB_assemblyticsfalcon_13119:HG2_PB_pbsv_1677:HG2_Ill_MetaSV_2434:HG3_PB_pbsv_1670:HG2_PB_SVrefine2Falcon1plusDovetail_5966;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6349:HG2_PB_SVrefine2PB10Xhap12_1330:HG2_PB_SVrefine2PBcRplusDovetail_5505:HG2_PB_assemblyticsPBcR_12705:HG4_Ill_SVrefine2DISCOVARDovetail_1140;NumExactMatchSVs=5;ClusterMaxShiftDist=0.234694;ClusterMaxSizeDiff=0.234694;ClusterMaxEditDist=0.234694;PBcalls=16;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-193;DistBack=-106;DistForward=-68;DistMin=-106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:10727193-10727401;PctSeqSimilarity=0.9308;PctSizeSimilarity=0.9897;PctRecOverlap=0.933;SizeDiff=-2;StartDistance=1;EndDistance=14;GTMatch=0;TruScore=95;MatchId=1862.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:67:./.:1:0:4:62:./.:1:14:1:1:./.:1:7:./.:.:.:.:.:.
chr2	10837642	HG2_10X_SVrefine210Xhap12_1264	GTCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGAGTTTCACCATATTGGCCAGGCTGGTCTAGAACTCCTGACCTTGTGATCTGCCCTCCTTGGCCTCCCAAAGTGCTGGAATTACAGGCGTGAGCCACCACGCCCGGCC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1264:HG3_PB_pbsv_1672:HG2_PB_pbsv_1679:HG3_Ill_GATKHCSBGrefine_1059:HG3_10X_allpass_294:HG3_PB_SVrefine2PBcRDovetail_903:HG2_PB_SVrefine2PBcRplusDovetail_5507:HG2_PB_SVrefine2PB10Xhap12_1332:HG2_PB_SVrefine2Falcon1plusDovetail_5968;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1264:HG3_PB_SVrefine2PBcRDovetail_903:HG2_PB_SVrefine2PBcRplusDovetail_5507:HG2_PB_SVrefine2PB10Xhap12_1332:HG2_PB_SVrefine2Falcon1plusDovetail_5968;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0140845;ClusterMaxSizeDiff=0.0140845;ClusterMaxEditDist=0.0353357;PBcalls=6;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-141;DistBack=10620;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=273;REFWIDENED=2:10837643-10838056;PctSeqSimilarity=0.9827;PctSizeSimilarity=0.993;PctRecOverlap=0.7413;SizeDiff=-1;StartDistance=-36;EndDistance=-37;GTMatch=0;TruScore=90;MatchId=1863.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:33:./.:15:10:18:12:./.:18:0:4:0:0/0:33:1:./.:.:.:.:.:.
chr2	11428780	HG2_Ill_Krunchall_2119	AATGGGAGCCTGGGAGGGTAAACAGGGAAGCTAGAGGATTGCAGAAAACGAAACAGCAGTAAAAATAAACCTTTAG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_1690:HG4_PB_HySA_2462:HG4_Ill_GATKHC_2546:HG4_Ill_GATKHCSBGrefine_1096:HG2_Ill_GATKHC_2551:HG2_Ill_GATKHCSBGrefine_1055:HG2_10X_allpass_243:HG2_PB_HySA_3086:HG4_Ill_manta_384:HG2_PB_PB10Xdip_16352:HG2_PB_PB10Xdip_16351:HG2_Ill_SpiralSDKrefine_8205:HG4_Ill_Spiral_118:HG2_Ill_Spiral_91:HG2_PB_assemblyticsfalcon_13133:HG3_PB_assemblyticsfalcon_13184:HG4_PB_assemblyticsfalcon_12958:HG4_Ill_svaba_1955:HG4_Ill_Krunchall_2200:HG4_Ill_250bpfermikitraw_2070:HG4_Ill_150bpfermikitraw_1998:HG2_PB_assemblyticsPBcR_12716:HG2_Ill_svaba_1945:HG2_Ill_Krunchall_2119:HG2_Ill_250bpfermikitraw_2099:HG2_Ill_150bpfermikitraw_1914:HG2_PB_pbsv_1690;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1914:HG2_Ill_250bpfermikitraw_2099:HG2_Ill_Krunchall_2119:HG2_Ill_svaba_1945:HG2_PB_assemblyticsPBcR_12716:HG4_Ill_150bpfermikitraw_1998:HG4_Ill_250bpfermikitraw_2070:HG4_Ill_Krunchall_2200:HG4_Ill_svaba_1955:HG4_PB_assemblyticsfalcon_12958;NumExactMatchSVs=10;ClusterMaxShiftDist=0.119205;ClusterMaxSizeDiff=0.119205;ClusterMaxEditDist=0.157895;PBcalls=10;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-75;DistBack=2403;DistForward=7245;DistMin=2403;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:11428779-11428856;PctSeqSimilarity=0.9558;PctSizeSimilarity=0.9868;PctRecOverlap=0.9221;SizeDiff=-1;StartDistance=-5;EndDistance=-6;GTMatch=0;TruScore=95;MatchId=1864.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:33:./.:15:8:5:22:1|0:0:19:39:1:0/1:36:27:./.:.:.:.:.:.
chr2	11474753	HG4_PB_SVrefine2Falcon1Dovetail_1060	CTCAAAAGCCAAGAAGCATATATGAAGGCAATGCTTAGCATATTAAGCATTTGTCAACACAATCATGCAGGTAATTAAGACAATACCAGCCCTGCTCTGGCGCGTTTCTATCTAAATAAAGTACTGCTAGAGAACACTTCGCTAATTCATTTCCATGGCATAGAAACCTCAATAATTAAACATTAGAAATTGTTCCAAGTCTATAATCCCTTGAAAATAAAATGTCTATCACTTGCTTTATAACTAAAGAAATCTGAGGTGAAACTCTTTTAGAGAATAAAGGAATTCAGACATTGAATATAAGTGGTCAATCACCTATGACAAAAAAAAATTATAAAGCACTTTAGATATC	AAAAAAA	20	PASS	ClusterIDs=HG2_PB_pbsv_1692:HG2_10X_allpass_244:HG2_Ill_SpiralSDKrefine_8206:HG2_PB_SVrefine2PBcRplusDovetail_5513:HG2_PB_SVrefine2PB10Xhap12_1340:HG4_PB_SVrefine2PBcRDovetail_910:HG4_PB_SVrefine2Falcon1Dovetail_1060:HG4_Ill_manta_385:HG4_Ill_SVrefine2DISCOVARDovetail_1145:HG4_Ill_Cortex_1725:HG3_PB_assemblyticsfalcon_13187:HG3_PB_SVrefine2Falcon1Dovetail_1052:HG3_Ill_Cortex_1776:HG2_PB_SVrefine2Falcon1plusDovetail_5976:HG2_Ill_manta_444:HG2_Ill_Cortex_4123:HG4_Ill_Spiral_119:HG2_Ill_Spiral_92:HG4_Ill_MetaSV_2518:HG2_PB_HySA_3094:HG4_PB_assemblyticsfalcon_12961:HG4_PB_pbsv_1692;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_Cortex_4123:HG2_Ill_manta_444:HG2_PB_SVrefine2Falcon1plusDovetail_5976:HG3_Ill_Cortex_1776:HG3_PB_SVrefine2Falcon1Dovetail_1052:HG3_PB_assemblyticsfalcon_13187:HG4_Ill_Cortex_1725:HG4_Ill_SVrefine2DISCOVARDovetail_1145:HG4_Ill_manta_385:HG4_PB_SVrefine2Falcon1Dovetail_1060:HG4_PB_SVrefine2PBcRDovetail_910;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0492041;ClusterMaxSizeDiff=0.0492041;ClusterMaxEditDist=0.057554;PBcalls=11;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-345;DistBack=-352;DistForward=19407;DistMin=-352;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:11474753-11475104;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.983;SizeDiff=0;StartDistance=-6;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1865.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:35:./.:12:23:5:5:1|0:0:20:53:0:0/1:46:9:0/1:46:17:.:.:.
chr2	11924415	HG3_Ill_150bpfermikitraw_1991	GTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAGTGTGAGAGAGAGGCAGTGGGAGGC	G	20	PASS	ClusterIDs=HG2_10X_allpass_246:HG3_Ill_GATKHC_2641:HG3_Ill_GATKHCSBGrefine_1067:HG2_Ill_GATKHC_2557:HG2_Ill_GATKHCSBGrefine_1060:HG2_PB_HySA_3107:HG3_Ill_manta_338:HG2_Ill_SpiralSDKrefine_8208:HG3_Ill_Spiral_1664:HG2_Ill_Spiral_94:HG3_PB_pbsv_1690:HG3_Ill_svaba_2007:HG3_Ill_scalpel_1605:HG3_Ill_Krunchall_2146:HG3_Ill_250bpfermikitraw_2099:HG3_Ill_150bpfermikitraw_1991:HG3_10X_allpass_297:HG2_PB_pbsv_1698:HG2_Ill_svaba_1948:HG2_Ill_scalpel_1496:HG2_Ill_Krunchall_2124:HG2_Ill_250bpfermikitraw_2104:HG2_Ill_150bpfermikitraw_1916;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_246:HG3_Ill_svaba_2007:HG3_Ill_scalpel_1605:HG3_Ill_Krunchall_2146:HG3_Ill_250bpfermikitraw_2099:HG3_Ill_150bpfermikitraw_1991:HG3_10X_allpass_297:HG2_PB_pbsv_1698:HG2_Ill_svaba_1948:HG2_Ill_scalpel_1496:HG2_Ill_Krunchall_2124:HG2_Ill_250bpfermikitraw_2104:HG2_Ill_150bpfermikitraw_1916;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0833333;ClusterMaxEditDist=0.0862069;PBcalls=3;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-60;DistBack=92005;DistForward=5438;DistMin=5438;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:11924414-11924477;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1866.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:19:0|1:28:1:0:16:0|1:22:0:0:15:0/1:16:21:./.:.:.:.:.:.
chr2	14054405	HG3_Ill_150bpfermikitraw_2013	TAAATTAAATTTAAAAGTTTTAAATTTAATTTAAAAATTAAATTTAAAAGTTTTAAATTTAATTTAA	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1071:HG2_PB_HySA_3128:HG2_PB_pbsv_1711:HG2_Ill_SpiralSDKrefine_8221:HG3_Ill_manta_342:HG2_Ill_manta_454:HG3_PB_pbsv_1703:HG3_Ill_svaba_2031:HG3_Ill_scalpel_1621:HG3_Ill_Krunchall_2162:HG3_Ill_GATKHC_2672:HG3_Ill_GATKHCSBGrefine_1082:HG3_Ill_250bpfermikitraw_2116:HG3_Ill_150bpfermikitraw_2013:HG3_10X_allpass_299:HG2_PB_assemblyticsPBcR_12737:HG2_Ill_svaba_1969:HG2_Ill_scalpel_1510:HG2_Ill_Krunchall_2142:HG2_Ill_GATKHC_2585:HG2_Ill_GATKHCSBGrefine_1071:HG2_Ill_250bpfermikitraw_2123:HG2_Ill_150bpfermikitraw_1933;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1933:HG2_Ill_250bpfermikitraw_2123:HG2_Ill_GATKHCSBGrefine_1071:HG2_Ill_GATKHC_2585:HG2_Ill_Krunchall_2142:HG2_Ill_scalpel_1510:HG2_Ill_svaba_1969:HG2_PB_assemblyticsPBcR_12737:HG3_10X_allpass_299:HG3_Ill_150bpfermikitraw_2013:HG3_Ill_250bpfermikitraw_2116:HG3_Ill_GATKHCSBGrefine_1082:HG3_Ill_GATKHC_2672:HG3_Ill_Krunchall_2162:HG3_Ill_scalpel_1621:HG3_Ill_svaba_2031;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0458015;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.0769231;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-66;DistBack=-1;DistForward=-19;DistMin=-19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=56;REFWIDENED=2:14054398-14054519;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1867.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:54:0|1:29:5:0:48:0|1:17:0:1:17:0/1:46:20:./.:.:.:.:.:.
chr2	14266673	HG2_Ill_250bpfermikitraw_2126	TTTATAATTAAATTATTTTAATTAAAATATTATAATTAAATTATTTTAATTAAAATA	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_2126:HG4_PB_pbsv_1706:HG3_PB_pbsv_1704:HG4_Ill_SVrefine2DISCOVARDovetail_1156:HG4_Ill_GATKHCSBGrefine_1111:HG4_Ill_250bpfermikitraw_2100:HG3_PB_SVrefine2PBcRDovetail_918:HG3_PB_SVrefine2Falcon1Dovetail_1060:HG3_Ill_250bpfermikitraw_2118:HG2_PB_pbsv_1712:HG2_PB_SVrefine2PBcRplusDovetail_5521:HG2_PB_SVrefine2PB10Xhap12_1350:HG2_PB_SVrefine2Falcon1plusDovetail_5984:HG2_Ill_SpiralSDKrefine_8223:HG2_Ill_SVrefine2DISCOVARplusDovetail_6361;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2126:HG4_Ill_SVrefine2DISCOVARDovetail_1156:HG4_Ill_GATKHCSBGrefine_1111:HG4_Ill_250bpfermikitraw_2100:HG3_PB_SVrefine2PBcRDovetail_918:HG3_PB_SVrefine2Falcon1Dovetail_1060:HG3_Ill_250bpfermikitraw_2118:HG2_PB_pbsv_1712:HG2_PB_SVrefine2PBcRplusDovetail_5521:HG2_PB_SVrefine2PB10Xhap12_1350:HG2_PB_SVrefine2Falcon1plusDovetail_5984:HG2_Ill_SpiralSDKrefine_8223:HG2_Ill_SVrefine2DISCOVARplusDovetail_6361;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0178571;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.0357143;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=29254;DistForward=-57;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=113;REFWIDENED=2:14266672-14266843;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1868.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:1:16:0:22:./.:1:0:0:2:1/1:0:36:./.:.:.:.:.:.
chr2	14531292	HG3_Ill_SVrefine2DISCOVARDovetail_1131	TGTGCTCTGCAAGTACACTACACATGTGCAGGCCCCCTACCACAGCATGAAGTACCCTGCCCATACACAAGGCCACATGTAATTTTCAAAGTTTGGATTGGCAGTAAAATGTACACCAGGAATAGGACAGGTCATTGAAAATGGAAATATAAGAGAAAGCATACTGTCTAAATGTAACCAATATAAATGTCTTCCCAAACTGAGGATGCAAATCAAATTACACTTTTCTTCCCCACACTCATTGCTGGAACCTCATCTCATTAGCAGGAAGTTGAATAATTTTCCCTAGATATTAATACCTGTCCCCTATTCCTTTAATTATTCAAG	AATGTCA	20	PASS	ClusterIDs=HG2_PB_pbsv_1714:HG2_Ill_SpiralSDKrefine_8226:HG2_10X_allpass_247:HG2_Ill_tnscope_176:HG4_Ill_Cortex_1730:HG3_Ill_manta_343:HG3_Ill_SVrefine2DISCOVARDovetail_1131:HG3_Ill_Cortex_1783:HG2_PB_SVrefine2Falcon2Bionano_611:HG2_Ill_SVrefine2DISCOVARplusDovetail_6363:HG2_Ill_Cortex_4134:HG2_10X_SVrefine210Xhap12_1282:HG3_Ill_MetaSV_2586:HG2_Ill_MetaSV_2446:HG3_Ill_Spiral_1685:HG2_Ill_Spiral_96:HG3_10X_allpass_300:HG3_Ill_Krunchall_2164:HG2_Ill_Krunchall_2145:HG3_PB_pbsv_1706;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1282:HG2_Ill_Cortex_4134:HG2_Ill_SVrefine2DISCOVARplusDovetail_6363:HG2_PB_SVrefine2Falcon2Bionano_611:HG3_Ill_Cortex_1783:HG3_Ill_SVrefine2DISCOVARDovetail_1131:HG3_Ill_manta_343:HG4_Ill_Cortex_1730;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0371517;ClusterMaxSizeDiff=0.0371517;ClusterMaxEditDist=0.0371517;PBcalls=3;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-107;DistForward=-273;DistMin=-273;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:14531292-14531618;PctSeqSimilarity=0.9643;PctSizeSimilarity=1;PctRecOverlap=0.9817;SizeDiff=0;StartDistance=-1;EndDistance=5;GTMatch=0;TruScore=98;MatchId=1869.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:45:./.:23:9:8:21:0|1:82:1:0:31:0/1:57:22:0/1:24:7:.:.:.
chr2	15044665	HG4_Ill_250bpfermikitraw_2106	AACTCAGTATGATAGGCTGTGTCACAGTCAGCTGTGACTCAGTATGATAGGCTGTGTCACAGTCAGCTGTG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_1709:HG2_PB_pbsv_1716:HG4_Ill_GATKHC_2582:HG4_Ill_GATKHCSBGrefine_1117:HG2_Ill_GATKHC_2596:HG2_Ill_GATKHCSBGrefine_1075:HG4_Ill_manta_390:HG2_Ill_SpiralSDKrefine_8232:HG4_PB_assemblyticsfalcon_12988:HG3_PB_assemblyticsfalcon_13213:HG4_Ill_svaba_1985:HG4_Ill_Krunchall_2231:HG4_Ill_250bpfermikitraw_2106:HG4_Ill_150bpfermikitraw_2030:HG2_Ill_svaba_1977:HG2_Ill_Krunchall_2149:HG2_Ill_250bpfermikitraw_2131:HG2_Ill_150bpfermikitraw_1940:HG4_PB_HySA_2488;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1940:HG2_Ill_250bpfermikitraw_2131:HG2_Ill_Krunchall_2149:HG2_Ill_svaba_1977:HG4_Ill_150bpfermikitraw_2030:HG4_Ill_250bpfermikitraw_2106:HG4_Ill_Krunchall_2231:HG4_Ill_svaba_1985;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0724638;PBcalls=5;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=-70;DistBack=8801;DistForward=83722;DistMin=8801;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=96;REFWIDENED=2:15044639-15044804;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1870.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:15:./.:18:7:6:7:./.:1:9:8:0:0/1:18:18:./.:.:.:.:.:.
chr2	15166285	HG2_Ill_scalpel_1519	TAAAAGTCTTTTCTGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1283:HG3_PB_HySA_2523:HG2_PB_assemblyticsfalcon_13162:HG4_Ill_Krunchall_2232:HG3_Ill_Krunchall_2167:HG2_PB_pbsv_1717:HG2_Ill_Krunchall_2150:HG4_PB_pbsv_1710:HG3_PB_pbsv_1708:HG3_10X_allpass_301:HG4_Ill_MetaSV_2524:HG3_Ill_MetaSV_2587:HG2_PB_HySA_3137:HG2_Ill_tnscope_177:HG2_Ill_MetaSV_2448:HG4_PB_assemblyticsfalcon_12989:HG4_PB_SVrefine2PBcRDovetail_921:HG4_PB_SVrefine2Falcon1Dovetail_1072:HG4_Ill_scalpel_1452:HG4_Ill_manta_391:HG4_Ill_SVrefine2DISCOVARDovetail_1157:HG4_Ill_GATKHCSBGrefine_1118:HG4_10X_allpass_276:HG3_PB_assemblyticsfalcon_13214:HG3_PB_SVrefine2Falcon1Dovetail_1062:HG3_Ill_manta_344:HG3_Ill_SVrefine2DISCOVARDovetail_1133:HG3_Ill_GATKHCSBGrefine_1086:HG2_PB_assemblyticsPBcR_12745:HG2_PB_SVrefine2PBcRplusDovetail_5523:HG2_PB_SVrefine2PB10Xhap12_1353:HG2_PB_SVrefine2Falcon2Bionano_613:HG2_PB_SVrefine2Falcon1plusDovetail_5986:HG2_Ill_scalpel_1519:HG2_Ill_manta_456:HG2_Ill_SVrefine2DISCOVARplusDovetail_6364:HG2_Ill_GATKHCSBGrefine_1076:HG2_10X_allpass_248;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1283:HG4_PB_assemblyticsfalcon_12989:HG4_PB_SVrefine2PBcRDovetail_921:HG4_PB_SVrefine2Falcon1Dovetail_1072:HG4_Ill_scalpel_1452:HG4_Ill_manta_391:HG4_Ill_SVrefine2DISCOVARDovetail_1157:HG4_Ill_GATKHCSBGrefine_1118:HG4_10X_allpass_276:HG3_PB_assemblyticsfalcon_13214:HG3_PB_SVrefine2Falcon1Dovetail_1062:HG3_Ill_manta_344:HG3_Ill_SVrefine2DISCOVARDovetail_1133:HG3_Ill_GATKHCSBGrefine_1086:HG2_PB_assemblyticsPBcR_12745:HG2_PB_SVrefine2PBcRplusDovetail_5523:HG2_PB_SVrefine2PB10Xhap12_1353:HG2_PB_SVrefine2Falcon2Bionano_613:HG2_PB_SVrefine2Falcon1plusDovetail_5986:HG2_Ill_scalpel_1519:HG2_Ill_manta_456:HG2_Ill_SVrefine2DISCOVARplusDovetail_6364:HG2_Ill_GATKHCSBGrefine_1076:HG2_10X_allpass_248;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0341085;ClusterMaxSizeDiff=0.0341085;ClusterMaxEditDist=0.0342146;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=37826;DistForward=-208;DistMin=-208;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=2:15166286-15166625;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1871.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:1:20:0:17:1/1:0:18:0:7:1/1:0:33:./.:2:9:.:.:.
chr2	16251106	HG2_Ill_SVrefine2DISCOVARplusDovetail_6367	AGATTTTTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCA	G	20	PASS	ClusterIDs=HG2_PB_HySA_3151:HG2_PB_PB10Xdip_16630:HG2_PB_SVrefine2PB10Xhap12_1358:HG2_10X_allpass_249:HG3_PB_SVrefine2PBcRDovetail_925:HG4_Ill_Krunchall_2245:HG2_Ill_Krunchall_2160:HG2_PB_assemblyticsfalcon_13173:HG2_PB_SVrefine2Falcon1plusDovetail_5991:HG3_PB_HySA_2534:HG4_PB_pbsv_1717:HG3_PB_pbsv_1715:HG2_PB_pbsv_1724:HG4_PB_SVrefine2PBcRDovetail_925:HG2_PB_SVrefine2PBcRplusDovetail_5527:HG2_PB_SVrefine2PB10Xhap12_1359:HG2_Ill_manta_458:HG2_Ill_SVrefine2DISCOVARplusDovetail_6367:HG2_10X_SVrefine210Xhap12_1287:HG4_Ill_MetaSV_2528:HG4_Ill_Spiral_125:HG3_Ill_Spiral_1698:HG2_Ill_Spiral_97:HG4_Ill_scalpel_1464:HG4_10X_allpass_278:HG3_Ill_scalpel_1632:HG3_10X_allpass_303:HG2_Ill_scalpel_1527:HG2_Ill_MetaSV_2451:HG2_PB_PB10Xdip_16629;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1287:HG2_Ill_SVrefine2DISCOVARplusDovetail_6367:HG2_Ill_manta_458:HG2_PB_SVrefine2PB10Xhap12_1359:HG2_PB_SVrefine2PBcRplusDovetail_5527:HG4_PB_SVrefine2PBcRDovetail_925;NumExactMatchSVs=6;ClusterMaxShiftDist=0.397138;ClusterMaxSizeDiff=0.397138;ClusterMaxEditDist=0.397138;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-104;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=2:16251107-16251445;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9969;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1872.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:28:0|1:21:5:1:17:1|0:0:29:39:0:0/1:31:19:./.:23:2:.:.:.
chr2	16271567	HG2_PB_SVrefine2Falcon2Bionano_619	TCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCCACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGACGGGGGTTGCAGTGAGTAGAGATCGCGCCACTCCACTCCAGCCTGGGCGACAGAGCGAGACTCCGCCTCAAAAAAAAAAAAAAAAAAAAAAGATGGCCTCTTTTCCTGCAGCAGAATGTAAGTGTCATGAGGTCAGGGACTCTGTCTGTCCTGTTCACAGATGTGTCCTCAGCATAAGGAATAGTACCTGACACTTAGCAGATCCTGGATAATAACAAGAATAATTCCAAACTACCACTTGTACATAAATAATTACATGAAAGGCACAAGGCAGCTATCATTTTCTGACCATTTAAGTGTTCTATATATACTTTTTTGCATTGAATTCTCAAGACAAAGTAAGATATACAACACTAACCGCCTTTTTTTTTCATAGATAAGAGGCATTTAAGGCTTAGAGAAGTTAAGTGACTTGCCCAAAGCCACACAGCTGATACTTGGCTGAAGGAATAAAAGTGATTGGGTTACATATTTAAATTCCCCAGGGGGCAAAAATCAACTCAAAGTGGATCAAAAACTTAAATCAAAGACCTGAAATCATTAAAATCCTACAAGAAAACCTGGTAGAAACTCTTTCAGACACTGACCTAGGCAAAGAATTTACGACTAAGACCTCAAAAGCAAATGCAACAAAACAAAAAATAAATAAATGGGACCTAATTCAACTAAAAACCTTCTGCATAGCAAAAGAAATAATCATCAGAATAAACAGACAACCCACAGAATGTGAGAAAATATTTGCAAATTATGCATCTGACAAAGGTCTAATACCCAGAATCTATAAGGAACTCAAACAAATTAGCAAGAAAAAAAATCCCATGAAAAGGTAGACAAATGACATGAATAGACACTTCTCAAAATAAGATATATAAATAGCCACAAACATATGAAAAAATAATCAACATCACTAATCATCAGGTAAATGCAAATTAAAACCATAATGAGATACCACCTTATCCCAGCCAGAATGGCCATTATTAGAAAGTCCAAAAACAATAGATGTTGGCATGGATGTGGTGAAAAGGGAAGAGTTTACACTGCGGGCAGGAATGTAAATTAGTCCAACCTCTATGGAGAGCAGTATGCAGATTTCTTTTTTCTTTTTTTTTTTATTTCGAGATGGAGTCTTGATCTGTCACTCATGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACTTCCACCTCCCAGGTTCAGGCAATTCACAGTGTGGAGATTTCTTAAAGAACTAAGAGTAGATTTACCATTTGACCTGGCAATCTCACTAATGGGTATTTACCCAAAGGAAAAAAAGTTATTATATCAAAAAGATACCTGCACACCTGTGTTTATAGCAGGACAATTTACAATTGTAAAGATGTGGGATCAACCTAAGTGCCCATGAACCAATGAGTGGATAAAGAAAATGTGGCATATATACACTATGGTATACTACTCAGCCATGAAAAAGAATGAAATGTCTTTTGCAGCAACTTGGATGGAGCTGAAGGCCATTATTCTAAGTGAAGTAACTCAGGAATAGAAAAGCAAATACAGTAAATTCTCACTTATGAGTGGGAGCTAAACTATGAGAATGCAAAGGCATTCAGAGTGGAATAATGGACATTGAAGATTCCGGAGTGTAGGAGGACCTGGGAGACAAAAAGTTATATATTGGGTACATGTACACCACTCAGGTGACAGGTACACTAAAATCTCAAACTTCAACACTAGCAAGATTGGTGCAGAGCAGCTGCGGGAGGCAGTGGTGTCGTCTGAGAGGGTCCTATGGACCAGCACCCCTGCCTGTAAATTCTTATTATTACCAGGTCTGCCTCATGGGCCTGTACAGGGTCTAAAGGGTAAACTTAGGAGCTATGATACACTGGCTGCACATGGGCAGGGCTGATGATGGCTGTGCAATGTCAGACGAACTTTGGATCTAATCTTGGTTCCGACACTTACCGGCTAGGTGACCGAAGCCTCAATGACCTCAGATGTAAAATGGTAAAATAATGATAAAGTTAAAAAAAAAAAAAGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1288:HG4_Ill_SVrefine2DISCOVARDovetail_1162:HG4_PB_pbsv_1721:HG4_10X_allpass_280:HG3_10X_allpass_304:HG2_10X_allpass_251:HG2_PB_pbsv_1728:HG4_PB_pbsv_1720:HG3_PB_pbsv_1717:HG4_PB_HySA_2496:HG4_PB_SVrefine2PBcRDovetail_927:HG4_PB_SVrefine2Falcon1Dovetail_1079:HG4_Ill_MetaSV_2529:HG3_Ill_SVrefine2DISCOVARDovetail_1137:HG3_Ill_MetaSV_2590:HG2_PB_SVrefine2PBcRplusDovetail_5529:HG2_PB_SVrefine2PB10Xhap12_1361:HG2_PB_SVrefine2Falcon2Bionano_619:HG2_PB_SVrefine2Falcon1plusDovetail_5993:HG2_Ill_SVrefine2DISCOVARplusDovetail_6369:HG2_Ill_GATKHCSBGrefine_1085;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1288:HG4_PB_SVrefine2PBcRDovetail_927:HG4_PB_SVrefine2Falcon1Dovetail_1079:HG4_Ill_MetaSV_2529:HG3_Ill_SVrefine2DISCOVARDovetail_1137:HG3_Ill_MetaSV_2590:HG2_PB_SVrefine2PBcRplusDovetail_5529:HG2_PB_SVrefine2PB10Xhap12_1361:HG2_PB_SVrefine2Falcon2Bionano_619:HG2_PB_SVrefine2Falcon1plusDovetail_5993:HG2_Ill_SVrefine2DISCOVARplusDovetail_6369:HG2_Ill_GATKHCSBGrefine_1085;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0618366;ClusterMaxSizeDiff=0.0618366;ClusterMaxEditDist=0.0721554;PBcalls=11;Illcalls=6;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2232;DistBack=13242;DistForward=5925;DistMin=5925;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=299;REFWIDENED=2:16271568-16274098;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1873.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:72:1/1:1:14:0:14:1/1:0:15:0:15:1/1:0:29:1/1:4:87:.:.:.
chr2	18127626	HG2_PB_SVrefine2Falcon1plusDovetail_5998	TTCCCTTCCTTCCCTTTCCCTCCCCTTCCCCTCTCCCCTCCCCTCCCCTCCCTTCCTCTCCCCTTCCCCCTTCCCTCCCCCTCCCTCCCTTCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_1722:HG4_PB_pbsv_1725:HG2_PB_pbsv_1732:HG4_PB_HySA_2507:HG3_PB_HySA_2556:HG2_PB_HySA_3168:HG3_PB_SVrefine2PBcRDovetail_928:HG3_Ill_SVrefine2DISCOVARDovetail_1142:HG4_PB_SVrefine2PBcRDovetail_931:HG4_PB_SVrefine2Falcon1Dovetail_1083:HG4_Ill_SVrefine2DISCOVARDovetail_1167:HG3_PB_SVrefine2Falcon1Dovetail_1072:HG2_PB_SVrefine2PBcRplusDovetail_5533:HG2_PB_SVrefine2PB10Xhap12_1365:HG2_PB_SVrefine2Falcon2Bionano_623:HG2_PB_SVrefine2Falcon1plusDovetail_5998:HG2_Ill_SVrefine2DISCOVARplusDovetail_6377:HG2_10X_SVrefine210Xhap12_1292;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1292:HG2_Ill_SVrefine2DISCOVARplusDovetail_6377:HG2_PB_SVrefine2Falcon1plusDovetail_5998:HG2_PB_SVrefine2Falcon2Bionano_623:HG2_PB_SVrefine2PB10Xhap12_1365:HG2_PB_SVrefine2PBcRplusDovetail_5533:HG3_PB_SVrefine2Falcon1Dovetail_1072:HG4_Ill_SVrefine2DISCOVARDovetail_1167:HG4_PB_SVrefine2Falcon1Dovetail_1083:HG4_PB_SVrefine2PBcRDovetail_931;NumExactMatchSVs=10;ClusterMaxShiftDist=0.201285;ClusterMaxSizeDiff=0.201285;ClusterMaxEditDist=0.225053;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-228;DistBack=24421;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=207;REFWIDENED=2:18127627-18128061;PctSeqSimilarity=0.9106;PctSizeSimilarity=0.9605;PctRecOverlap=0.4716;SizeDiff=9;StartDistance=-121;EndDistance=-112;GTMatch=1;TruScore=78;MatchId=1874.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:1:26:0:23:./.:20:1:27:2:0/0:21:1:./.:.:.:.:.:.
chr2	18817194	HG4_Ill_GATKHCSBGrefine_1131	ATATATATATATATATATATATATATATATATATGTATATATATATATATATATATGTATATATATATATATATTTTTTT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_1742:HG2_PB_HySA_3178:HG4_Ill_scalpel_1482:HG4_Ill_GATKHC_2617:HG4_Ill_GATKHCSBGrefine_1131:HG2_Ill_manta_462:HG2_Ill_Krunchall_2181:HG2_Ill_GATKHC_2627:HG2_Ill_GATKHCSBGrefine_1093:HG2_Ill_150bpfermikitraw_1968:HG4_PB_assemblyticsfalcon_13020:HG4_Ill_svaba_2016:HG4_Ill_GATKHC_2616:HG4_Ill_GATKHCSBGrefine_1130:HG4_Ill_150bpfermikitraw_2060:HG2_Ill_svaba_2001:HG2_Ill_breakscan11_223:HG4_PB_pbsv_1733;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_1968:HG2_Ill_GATKHCSBGrefine_1093:HG2_Ill_GATKHC_2627:HG2_Ill_Krunchall_2181:HG2_Ill_manta_462:HG4_Ill_GATKHCSBGrefine_1131:HG4_Ill_GATKHC_2617:HG4_Ill_scalpel_1482;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0621118;ClusterMaxSizeDiff=0.0621118;ClusterMaxEditDist=0.135802;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-79;DistBack=1463;DistForward=35692;DistMin=1463;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:18817193-18817275;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1875.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:19:0|1:39:3:1:15:0|1:20:0:1:20:0/1:2:8:./.:.:.:.:.:.
chr2	20666665	HG2_Ill_SVrefine2DISCOVARplusDovetail_6391	TAAAATGCCATGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_100:HG3_PB_HySA_2584:HG4_PB_assemblyticsfalcon_13037:HG3_PB_assemblyticsfalcon_13257:HG4_Ill_Krunchall_2290:HG3_Ill_Krunchall_2218:HG2_Ill_Krunchall_2196:HG3_PB_pbsv_1737:HG4_PB_pbsv_1746:HG2_PB_pbsv_1749:HG4_PB_HySA_2543:HG4_Ill_MetaSV_2537:HG2_Ill_tnscope_179:HG2_Ill_MetaSV_2459:HG4_PB_SVrefine2PBcRDovetail_943:HG4_PB_SVrefine2Falcon1Dovetail_1095:HG4_Ill_manta_405:HG4_Ill_SVrefine2DISCOVARDovetail_1182:HG4_Ill_GATKHCSBGrefine_1142:HG3_PB_SVrefine2PBcRDovetail_937:HG3_PB_SVrefine2Falcon1Dovetail_1086:HG3_Ill_manta_352:HG3_Ill_MetaSV_2596:HG3_Ill_GATKHCSBGrefine_1106:HG3_10X_allpass_307:HG2_PB_SVrefine2Falcon2Bionano_634:HG2_PB_SVrefine2Falcon1plusDovetail_6008:HG2_Ill_manta_467:HG2_Ill_SVrefine2DISCOVARplusDovetail_6391:HG2_10X_allpass_253:HG2_10X_SVrefine210Xhap12_1303:HG2_Ill_breakscan11_224;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1303:HG2_10X_allpass_253:HG2_Ill_SVrefine2DISCOVARplusDovetail_6391:HG2_Ill_manta_467:HG2_PB_SVrefine2Falcon1plusDovetail_6008:HG2_PB_SVrefine2Falcon2Bionano_634:HG3_10X_allpass_307:HG3_Ill_GATKHCSBGrefine_1106:HG3_Ill_MetaSV_2596:HG3_Ill_manta_352:HG3_PB_SVrefine2Falcon1Dovetail_1086:HG3_PB_SVrefine2PBcRDovetail_937:HG4_Ill_GATKHCSBGrefine_1142:HG4_Ill_SVrefine2DISCOVARDovetail_1182:HG4_Ill_manta_405:HG4_PB_SVrefine2Falcon1Dovetail_1095:HG4_PB_SVrefine2PBcRDovetail_943;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0827815;ClusterMaxSizeDiff=0.0827815;ClusterMaxEditDist=0.0827815;PBcalls=13;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=-796;DistForward=-290;DistMin=-796;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:20666666-20666985;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1876.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:0|1:30:0:0:22:0|1:31:0:0:8:0/1:36:17:0/1:23:14:.:.:.
chr2	23802957	HG4_Ill_SVrefine2DISCOVARDovetail_1195	CAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAAGCTGAGGCGGGCCGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAAAGCTAGCCGGGCATGGTGGCAGGCGCCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCAGAGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCTGTCTCATAAAAAAGATCTAGCCCATT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1320:HG4_PB_HySA_2571:HG3_PB_HySA_2604:HG3_PB_pbsv_1747:HG2_PB_pbsv_1758:HG4_PB_pbsv_1757:HG3_Ill_MetaSV_2599:HG2_Ill_MetaSV_2463:HG2_Ill_150bpfermikitraw_2008:HG4_PB_SVrefine2Falcon1Dovetail_1103:HG4_Ill_SVrefine2DISCOVARDovetail_1195:HG3_PB_SVrefine2PBcRDovetail_945:HG3_PB_SVrefine2Falcon1Dovetail_1092:HG3_Ill_SVrefine2DISCOVARDovetail_1167:HG2_PB_SVrefine2PBcRplusDovetail_5550:HG2_PB_SVrefine2PB10Xhap12_1382:HG2_PB_SVrefine2Falcon2Bionano_643:HG2_PB_SVrefine2Falcon1plusDovetail_6015:HG2_Ill_SVrefine2DISCOVARplusDovetail_6405;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1320:HG4_PB_SVrefine2Falcon1Dovetail_1103:HG4_Ill_SVrefine2DISCOVARDovetail_1195:HG3_PB_SVrefine2PBcRDovetail_945:HG3_PB_SVrefine2Falcon1Dovetail_1092:HG3_Ill_SVrefine2DISCOVARDovetail_1167:HG2_PB_SVrefine2PBcRplusDovetail_5550:HG2_PB_SVrefine2PB10Xhap12_1382:HG2_PB_SVrefine2Falcon2Bionano_643:HG2_PB_SVrefine2Falcon1plusDovetail_6015:HG2_Ill_SVrefine2DISCOVARplusDovetail_6405;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0131579;ClusterMaxSizeDiff=0.0131579;ClusterMaxEditDist=0.118421;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-305;DistBack=42629;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=590;REFWIDENED=2:23802958-23803852;PctSeqSimilarity=0.9276;PctSizeSimilarity=0.9934;PctRecOverlap=0.2778;SizeDiff=2;StartDistance=-221;EndDistance=-219;GTMatch=0;TruScore=73;MatchId=1877.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:56:./.:1:6:0:0:./.:20:1:22:0:0/0:64:1:0/0:39:2:.:.:.
chr2	24474208	HG3_PB_SVrefine2Falcon1Dovetail_1094	ATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATATATGTATGTGTATATATATGTGTATATATATATGTGTGTATATATATGTGTATATATATGTGTG	A	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1094:HG4_PB_SVrefine2Falcon1Dovetail_1105:HG2_PB_HySA_3227:HG2_PB_HySA_3226;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1094;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0824742;ClusterMaxSizeDiff=0.0824742;ClusterMaxEditDist=0.185567;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-100;DistBack=-167;DistForward=-95;DistMin=-167;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:24474207-24474322;PctSeqSimilarity=0.9412;PctSizeSimilarity=0.98;PctRecOverlap=0.6436;SizeDiff=2;StartDistance=-36;EndDistance=-34;GTMatch=1;TruScore=85;MatchId=1878.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:78:1/1:4:54:1:11:./.:6:1:1:1:./.:1:5:./.:.:.:.:.:.
chr2	25227620	HG3_Ill_scalpel_1688	TAAAAATTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1329:HG4_Ill_Krunchall_2333:HG3_Ill_Krunchall_2254:HG2_Ill_Krunchall_2236:HG2_PB_pbsv_1765:HG4_PB_assemblyticsfalcon_13081:HG3_PB_assemblyticsfalcon_13293:HG2_PB_assemblyticsfalcon_13241:HG2_PB_assemblyticsPBcR_12827:HG4_PB_HySA_2594:HG3_PB_HySA_2627:HG4_Ill_MetaSV_2543:HG3_Ill_MetaSV_2601:HG2_PB_HySA_3244:HG2_Ill_tnscope_180:HG2_Ill_MetaSV_2464:HG4_PB_pbsv_1766:HG4_PB_SVrefine2Falcon1Dovetail_1109:HG4_Ill_scalpel_1522:HG4_Ill_manta_408:HG4_Ill_SVrefine2DISCOVARDovetail_1203:HG4_Ill_GATKHCSBGrefine_1154:HG4_10X_allpass_285:HG3_PB_pbsv_1755:HG3_PB_SVrefine2PBcRDovetail_950:HG3_PB_SVrefine2Falcon1Dovetail_1097:HG3_Ill_scalpel_1688:HG3_Ill_manta_356:HG3_Ill_SVrefine2DISCOVARDovetail_1175:HG3_Ill_GATKHCSBGrefine_1125:HG3_10X_allpass_311:HG2_PB_SVrefine2PBcRplusDovetail_5557:HG2_PB_SVrefine2PB10Xhap12_1392:HG2_PB_SVrefine2Falcon2Bionano_651:HG2_PB_SVrefine2Falcon1plusDovetail_6019:HG2_Ill_scalpel_1577:HG2_Ill_manta_472:HG2_Ill_SVrefine2DISCOVARplusDovetail_6418:HG2_Ill_GATKHCSBGrefine_1117:HG2_10X_allpass_255;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1329:HG4_PB_pbsv_1766:HG4_PB_SVrefine2Falcon1Dovetail_1109:HG4_Ill_scalpel_1522:HG4_Ill_manta_408:HG4_Ill_SVrefine2DISCOVARDovetail_1203:HG4_Ill_GATKHCSBGrefine_1154:HG4_10X_allpass_285:HG3_PB_pbsv_1755:HG3_PB_SVrefine2PBcRDovetail_950:HG3_PB_SVrefine2Falcon1Dovetail_1097:HG3_Ill_scalpel_1688:HG3_Ill_manta_356:HG3_Ill_SVrefine2DISCOVARDovetail_1175:HG3_Ill_GATKHCSBGrefine_1125:HG3_10X_allpass_311:HG2_PB_SVrefine2PBcRplusDovetail_5557:HG2_PB_SVrefine2PB10Xhap12_1392:HG2_PB_SVrefine2Falcon2Bionano_651:HG2_PB_SVrefine2Falcon1plusDovetail_6019:HG2_Ill_scalpel_1577:HG2_Ill_manta_472:HG2_Ill_SVrefine2DISCOVARplusDovetail_6418:HG2_Ill_GATKHCSBGrefine_1117:HG2_10X_allpass_255;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0544872;ClusterMaxSizeDiff=0.0544872;ClusterMaxEditDist=0.0544872;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=70323;DistForward=9433;DistMin=9433;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=2:25227621-25227944;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1879.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:35:./.:0:9:0:2:1/1:0:6:0:11:1/1:0:56:./.:2:11:.:.:.
chr2	26878008	HG3_PB_SVrefine2Falcon1Dovetail_1102	AGAAAGGAAGGAAGGAGGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAGGGAAGGAAGGAAGGAG	A	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_1187:HG4_PB_SVrefine2PBcRDovetail_950:HG2_PB_HySA_3262:HG2_PB_SVrefine2Falcon1plusDovetail_6024:HG3_PB_HySA_2638:HG2_PB_assemblyticsfalcon_13253:HG4_PB_HySA_2606:HG2_PB_HySA_3261:HG2_PB_assemblyticsPBcR_12838:HG4_PB_pbsv_1774:HG4_Ill_svaba_2085:HG4_Ill_manta_410:HG4_Ill_SVrefine2DISCOVARDovetail_1212:HG4_Ill_GATKHC_2705:HG4_Ill_GATKHCSBGrefine_1155:HG3_PB_pbsv_1761:HG3_PB_assemblyticsfalcon_13305:HG3_PB_SVrefine2PBcRDovetail_956:HG3_PB_SVrefine2Falcon1Dovetail_1102:HG3_Ill_svaba_2134:HG3_Ill_GATKHC_2789:HG3_Ill_GATKHCSBGrefine_1128:HG3_10X_allpass_313:HG2_PB_SVrefine2PBcRplusDovetail_5562:HG2_PB_SVrefine2PB10Xhap12_1397:HG2_PB_SVrefine2Falcon2Bionano_654:HG2_Ill_svaba_2064:HG2_Ill_SVrefine2DISCOVARplusDovetail_6428:HG2_Ill_GATKHC_2709:HG2_Ill_GATKHCSBGrefine_1118:HG2_10X_allpass_256:HG2_10X_SVrefine210Xhap12_1340:HG4_PB_SVrefine2Falcon1Dovetail_1115:HG4_PB_assemblyticsfalcon_13095:HG2_PB_HySA_3260:HG2_PB_pbsv_1772;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1340:HG2_10X_allpass_256:HG2_Ill_GATKHCSBGrefine_1118:HG2_Ill_GATKHC_2709:HG2_Ill_SVrefine2DISCOVARplusDovetail_6428:HG2_Ill_svaba_2064:HG2_PB_SVrefine2Falcon2Bionano_654:HG2_PB_SVrefine2PB10Xhap12_1397:HG2_PB_SVrefine2PBcRplusDovetail_5562:HG3_10X_allpass_313:HG3_Ill_GATKHCSBGrefine_1128:HG3_Ill_GATKHC_2789:HG3_Ill_svaba_2134:HG3_PB_SVrefine2Falcon1Dovetail_1102:HG3_PB_SVrefine2PBcRDovetail_956:HG3_PB_assemblyticsfalcon_13305:HG3_PB_pbsv_1761:HG4_Ill_GATKHCSBGrefine_1155:HG4_Ill_GATKHC_2705:HG4_Ill_SVrefine2DISCOVARDovetail_1212:HG4_Ill_manta_410:HG4_Ill_svaba_2085:HG4_PB_pbsv_1774;NumExactMatchSVs=23;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.25;ClusterMaxEditDist=0.256944;PBcalls=20;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-128;DistBack=43007;DistForward=15304;DistMin=15304;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=116;REFWIDENED=2:26877974-26878217;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1880.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:61:1/1:3:25:1:16:./.:1:11:0:10:1/1:0:12:./.:.:.:.:.:.
chr2	27324253	HG2_PB_SVrefine2PBcRplusDovetail_5564	GGCCTCTGCCTGGCCCCCAGCTTCCCCTCTGGGCCCGGGGGCATCTCCTTCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1342:HG4_PB_pbsv_1777:HG2_PB_HySA_3266:HG2_PB_pbsv_1774:HG3_PB_pbsv_1763:HG4_PB_HySA_2611:HG4_PB_assemblyticsfalcon_13096:HG4_PB_SVrefine2PBcRDovetail_952:HG4_Ill_GATKHCSBGrefine_1158:HG4_Ill_250bpfermikitraw_2213:HG4_Ill_150bpfermikitraw_2141:HG3_PB_assemblyticsfalcon_13308:HG3_Ill_GATKHCSBGrefine_1130:HG3_Ill_250bpfermikitraw_2217:HG3_Ill_150bpfermikitraw_2121:HG2_PB_SVrefine2PBcRplusDovetail_5564:HG2_PB_SVrefine2PB10Xhap12_1399:HG2_PB_SVrefine2Falcon1plusDovetail_6026:HG2_Ill_SpiralSDKrefine_8310:HG2_Ill_SVrefine2DISCOVARplusDovetail_6430:HG2_Ill_GATKHCSBGrefine_1120:HG2_Ill_250bpfermikitraw_2221:HG2_Ill_150bpfermikitraw_2033;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1342:HG4_PB_SVrefine2PBcRDovetail_952:HG4_Ill_GATKHCSBGrefine_1158:HG4_Ill_250bpfermikitraw_2213:HG4_Ill_150bpfermikitraw_2141:HG3_PB_assemblyticsfalcon_13308:HG3_Ill_GATKHCSBGrefine_1130:HG3_Ill_250bpfermikitraw_2217:HG3_Ill_150bpfermikitraw_2121:HG2_PB_SVrefine2PBcRplusDovetail_5564:HG2_PB_SVrefine2PB10Xhap12_1399:HG2_PB_SVrefine2Falcon1plusDovetail_6026:HG2_Ill_SpiralSDKrefine_8310:HG2_Ill_SVrefine2DISCOVARplusDovetail_6430:HG2_Ill_GATKHCSBGrefine_1120:HG2_Ill_250bpfermikitraw_2221:HG2_Ill_150bpfermikitraw_2033;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0392157;PBcalls=11;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=10227;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=172;REFWIDENED=2:27324254-27324476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1881.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:1:34:2:21:./.:1:4:0:3:1/1:0:22:./.:.:.:.:.:.
chr2	28353920	HG4_Ill_GATKHCSBGrefine_1162	TTATTATTATTATTATTATTATTATTATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1346:HG3_PB_pbsv_1768:HG4_PB_pbsv_1782:HG2_PB_HySA_3272:HG4_PB_HySA_2619:HG4_Ill_svaba_2094:HG4_Ill_scalpel_1532:HG4_Ill_manta_412:HG4_Ill_GATKHCSBGrefine_1162:HG3_Ill_svaba_2140:HG3_Ill_scalpel_1699:HG3_Ill_manta_359:HG3_Ill_GATKHCSBGrefine_1134:HG3_10X_allpass_314:HG2_PB_pbsv_1780:HG2_Ill_svaba_2069:HG2_Ill_scalpel_1585:HG2_Ill_manta_474:HG2_Ill_GATKHCSBGrefine_1124:HG2_Ill_breakscan11_225:HG4_Ill_MetaSV_2549:HG3_PB_HySA_2648:HG3_Ill_MetaSV_2606:HG4_PB_SVrefine2PBcRDovetail_955:HG4_PB_SVrefine2Falcon1Dovetail_1122:HG4_Ill_SVrefine2DISCOVARDovetail_1219:HG3_PB_SVrefine2PBcRDovetail_961:HG3_PB_SVrefine2Falcon1Dovetail_1108:HG3_Ill_SVrefine2DISCOVARDovetail_1197:HG2_PB_SVrefine2PBcRplusDovetail_5568:HG2_PB_SVrefine2PB10Xhap12_1403:HG2_PB_SVrefine2Falcon2Bionano_658:HG2_PB_SVrefine2Falcon1plusDovetail_6033:HG2_Ill_SVrefine2DISCOVARplusDovetail_6436;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1124:HG2_Ill_manta_474:HG2_Ill_scalpel_1585:HG2_Ill_svaba_2069:HG2_PB_pbsv_1780:HG3_10X_allpass_314:HG3_Ill_GATKHCSBGrefine_1134:HG3_Ill_manta_359:HG3_Ill_scalpel_1699:HG3_Ill_svaba_2140:HG4_Ill_GATKHCSBGrefine_1162:HG4_Ill_manta_412:HG4_Ill_scalpel_1532:HG4_Ill_svaba_2094:HG4_PB_HySA_2619;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0564636;ClusterMaxSizeDiff=0.0564636;ClusterMaxEditDist=0.178306;PBcalls=14;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-567;DistForward=-322;DistMin=-567;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=2:28353921-28354254;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1882.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:79:1/1:0:27:1:42:./.:0:0:0:1:1/1:0:42:0/1:3:11:.:.:.
chr2	28661665	HG4_Ill_svaba_2099	TCTAGCTCGAGTTCAGATCTCTTATGTGAGCCCCTGACGCTGCGGACCTGCCCC	T	20	PASS	ClusterIDs=HG2_10X_allpass_257:HG4_PB_pbsv_1783:HG4_Ill_svaba_2099:HG4_Ill_scalpel_1534:HG4_Ill_manta_413:HG4_Ill_Krunchall_2349:HG4_Ill_GATKHC_2717:HG4_Ill_GATKHCSBGrefine_1163:HG4_Ill_Cortex_1755:HG4_Ill_250bpfermikitraw_2218:HG4_Ill_150bpfermikitraw_2147:HG4_CG_vcfBeta_1110:HG2_PB_pbsv_1781:HG2_PB_assemblyticsfalcon_13265:HG2_PB_assemblyticsPBcR_12851:HG2_Ill_svaba_2071:HG2_Ill_scalpel_1587:HG2_Ill_manta_475:HG2_Ill_breakscan11_226:HG2_Ill_SpiralSDKrefine_8314:HG2_Ill_Krunchall_2252:HG2_Ill_GATKHC_2723:HG2_Ill_GATKHCSBGrefine_1125:HG2_Ill_Cortex_4191:HG2_Ill_250bpfermikitraw_2226:HG2_Ill_150bpfermikitraw_2038:HG2_CG_vcfBeta_999;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_257:HG4_PB_pbsv_1783:HG4_Ill_svaba_2099:HG4_Ill_scalpel_1534:HG4_Ill_manta_413:HG4_Ill_Krunchall_2349:HG4_Ill_GATKHC_2717:HG4_Ill_GATKHCSBGrefine_1163:HG4_Ill_Cortex_1755:HG4_Ill_250bpfermikitraw_2218:HG4_Ill_150bpfermikitraw_2147:HG4_CG_vcfBeta_1110:HG2_PB_pbsv_1781:HG2_PB_assemblyticsfalcon_13265:HG2_PB_assemblyticsPBcR_12851:HG2_Ill_svaba_2071:HG2_Ill_scalpel_1587:HG2_Ill_manta_475:HG2_Ill_breakscan11_226:HG2_Ill_SpiralSDKrefine_8314:HG2_Ill_Krunchall_2252:HG2_Ill_GATKHC_2723:HG2_Ill_GATKHCSBGrefine_1125:HG2_Ill_Cortex_4191:HG2_Ill_250bpfermikitraw_2226:HG2_Ill_150bpfermikitraw_2038:HG2_CG_vcfBeta_999;NumExactMatchSVs=27;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=4;Illcalls=20;TenXcalls=1;CGcalls=2;PBexactcalls=4;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=2;HG2count=16;HG3count=0;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-53;DistBack=17375;DistForward=-52;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:28661664-28661720;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1883.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:26:1|0:3:23:31:1:0|1:25:1:0:20:0/1:30:31:./.:.:.:.:.:.
chr2	28681235	HG2_PB_SVrefine2Falcon1plusDovetail_6034	CACTGGGGCCTCTCAGAGGGTGGAGGGTGGGAGGAGGGAGAGGATCAGGAAAAATAACGAATGGGTACTAGGCTTAATACCTGGTTGATAACATAATCTGTACAACAAACCCCCATGACACATGTTGACCTAAGTTACAAACCTGCACATGTACCTGTAATTAAAAGTTAAAAAAAATAAAGAATTCTGGAAATGGATGATGGTGTTGGTTGCCCAGCATTGTGGGTGTAGTTAACACCGCTGAACTGTACACTTAAAAATGGTTAAAATGGTAAATTTTATGTTATGGCTATGTCAATCTAAAGAAAGAAATGGAGGCAAAATTAATATAAAGAGTTTATTTGGGCCAAGGTTAAGGACTATAGCTCAGGACACACTTCCAAGTTGTCTTGGCAATGCTCTGTTTGGCCTCTGCTACAAGCAGGTTATTTTGTTTTTTTCTGTTTTTTGTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1348:HG3_PB_pbsv_1769:HG4_PB_pbsv_1784:HG3_PB_HySA_2649:HG2_PB_pbsv_1782:HG4_PB_HySA_2621:HG4_PB_SVrefine2PBcRDovetail_956:HG4_PB_SVrefine2Falcon1Dovetail_1123:HG4_Ill_SVrefine2DISCOVARDovetail_1222:HG3_PB_SVrefine2PBcRDovetail_962:HG3_PB_SVrefine2Falcon1Dovetail_1109:HG3_Ill_SVrefine2DISCOVARDovetail_1199:HG2_PB_SVrefine2PBcRplusDovetail_5569:HG2_PB_SVrefine2PB10Xhap12_1404:HG2_PB_SVrefine2Falcon2Bionano_659:HG2_PB_SVrefine2Falcon1plusDovetail_6034:HG2_PB_HySA_3277:HG2_Ill_SVrefine2DISCOVARplusDovetail_6438:HG2_Ill_MetaSV_2469;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1348:HG4_PB_SVrefine2PBcRDovetail_956:HG4_PB_SVrefine2Falcon1Dovetail_1123:HG4_Ill_SVrefine2DISCOVARDovetail_1222:HG3_PB_SVrefine2PBcRDovetail_962:HG3_PB_SVrefine2Falcon1Dovetail_1109:HG3_Ill_SVrefine2DISCOVARDovetail_1199:HG2_PB_SVrefine2PBcRplusDovetail_5569:HG2_PB_SVrefine2PB10Xhap12_1404:HG2_PB_SVrefine2Falcon2Bionano_659:HG2_PB_SVrefine2Falcon1plusDovetail_6034:HG2_PB_HySA_3277:HG2_Ill_SVrefine2DISCOVARplusDovetail_6438:HG2_Ill_MetaSV_2469;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0142712;ClusterMaxSizeDiff=0.0142712;ClusterMaxEditDist=0.0142712;PBcalls=14;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-489;DistBack=10252;DistForward=-424;DistMin=-424;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=489;REFWIDENED=2:28681236-28682213;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.998;PctRecOverlap=0.1163;SizeDiff=1;StartDistance=-433;EndDistance=-432;GTMatch=0;TruScore=70;MatchId=1884.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:1/1:0:33:0:11:./.:1:0:0:0:./.:0:0:0/1:7:4:.:.:.
chr2	29999224	HG3_Ill_scalpel_1715	TAAACCCCCTCCTCATTCCTTCCAATCCTAACCTTGATTCAGCGTTGAGCAAGAAACAGTGGCAGACGATAGTTTG	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_129:HG3_PB_HySA_2659:HG3_Ill_Spiral_1800:HG2_PB_HySA_3300:HG2_Ill_Spiral_103:HG4_PB_pbsv_1787:HG4_PB_assemblyticsfalcon_13116:HG4_Ill_svaba_2116:HG4_Ill_scalpel_1544:HG4_Ill_manta_415:HG4_Ill_Krunchall_2362:HG4_Ill_GATKHC_2731:HG4_Ill_GATKHCSBGrefine_1170:HG4_Ill_Cortex_1758:HG4_Ill_250bpfermikitraw_2234:HG4_Ill_150bpfermikitraw_2163:HG4_CG_vcfBeta_1118:HG4_10X_allpass_286:HG3_PB_pbsv_1776:HG3_Ill_svaba_2165:HG3_Ill_scalpel_1715:HG3_Ill_manta_363:HG3_Ill_Krunchall_2292:HG3_Ill_GATKHC_2820:HG3_Ill_GATKHCSBGrefine_1143:HG3_Ill_Cortex_1810:HG3_Ill_250bpfermikitraw_2241:HG3_Ill_150bpfermikitraw_2143:HG3_CG_vcfBeta_974:HG3_10X_allpass_316:HG2_PB_pbsv_1790:HG2_Ill_svaba_2093:HG2_Ill_scalpel_1598:HG2_Ill_manta_479:HG2_Ill_Krunchall_2270:HG2_Ill_GATKHC_2740:HG2_Ill_GATKHCSBGrefine_1133:HG2_Ill_Cortex_4195:HG2_Ill_250bpfermikitraw_2244:HG2_Ill_150bpfermikitraw_2056:HG2_CG_vcfBeta_1008:HG2_10X_allpass_259:HG2_PB_assemblyticsPBcR_12862:HG3_PB_assemblyticsfalcon_13331:HG2_PB_assemblyticsfalcon_13279:HG2_Ill_breakscan11_227:HG2_Ill_SpiralSDKrefine_8324;NumClusterSVs=47;ExactMatchIDs=HG2_10X_allpass_259:HG2_CG_vcfBeta_1008:HG2_Ill_150bpfermikitraw_2056:HG2_Ill_250bpfermikitraw_2244:HG2_Ill_Cortex_4195:HG2_Ill_GATKHCSBGrefine_1133:HG2_Ill_GATKHC_2740:HG2_Ill_Krunchall_2270:HG2_Ill_manta_479:HG2_Ill_scalpel_1598:HG2_Ill_svaba_2093:HG2_PB_pbsv_1790:HG3_10X_allpass_316:HG3_CG_vcfBeta_974:HG3_Ill_150bpfermikitraw_2143:HG3_Ill_250bpfermikitraw_2241:HG3_Ill_Cortex_1810:HG3_Ill_GATKHCSBGrefine_1143:HG3_Ill_GATKHC_2820:HG3_Ill_Krunchall_2292:HG3_Ill_manta_363:HG3_Ill_scalpel_1715:HG3_Ill_svaba_2165:HG3_PB_pbsv_1776:HG4_10X_allpass_286:HG4_CG_vcfBeta_1118:HG4_Ill_150bpfermikitraw_2163:HG4_Ill_250bpfermikitraw_2234:HG4_Ill_Cortex_1758:HG4_Ill_GATKHCSBGrefine_1170:HG4_Ill_GATKHC_2731:HG4_Ill_Krunchall_2362:HG4_Ill_manta_415:HG4_Ill_scalpel_1544:HG4_Ill_svaba_2116:HG4_PB_assemblyticsfalcon_13116:HG4_PB_pbsv_1787;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0263158;ClusterMaxSizeDiff=0.0263158;ClusterMaxEditDist=0.0506329;PBcalls=9;Illcalls=32;TenXcalls=3;CGcalls=3;PBexactcalls=4;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=3;HG2count=18;HG3count=15;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-75;DistBack=21278;DistForward=12581;DistMin=12581;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=2:29999225-29999302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1885.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:./.:0:13:0:4:1/1:0:12:0:15:1/1:1:21:./.:.:.:.:.:.
chr2	31342725	HG4_10X_allpass_288	TAAAAATAATGAGCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_104:HG2_PB_PB10Xdip_17342:HG2_PB_PB10Xdip_17341:HG4_Ill_Krunchall_2378:HG3_PB_HySA_2678:HG2_PB_HySA_3317:HG4_Ill_Krunchall_2377:HG2_PB_pbsv_1796:HG2_Ill_Krunchall_2281:HG3_PB_assemblyticsfalcon_13345:HG4_PB_assemblyticsfalcon_13127:HG2_PB_SVrefine2PB10Xhap12_1412:HG4_Ill_MetaSV_2553:HG2_Ill_MetaSV_2471:HG4_PB_SVrefine2PBcRDovetail_960:HG4_PB_SVrefine2Falcon1Dovetail_1129:HG4_Ill_SVrefine2DISCOVARDovetail_1233:HG4_Ill_GATKHCSBGrefine_1173:HG4_10X_allpass_288:HG3_PB_pbsv_1783:HG3_PB_SVrefine2PBcRDovetail_968:HG3_PB_SVrefine2Falcon1Dovetail_1114:HG3_Ill_manta_365:HG3_Ill_MetaSV_2610:HG3_Ill_GATKHCSBGrefine_1147:HG3_10X_allpass_318:HG2_PB_SVrefine2PB10Xhap12_1411:HG2_PB_SVrefine2Falcon1plusDovetail_6038:HG2_PB_HySA_3316:HG2_Ill_manta_481:HG2_Ill_breakscan11_228:HG2_Ill_GATKHCSBGrefine_1136:HG2_10X_SVrefine210Xhap12_1357:HG4_PB_pbsv_1793:HG4_Ill_Spiral_130:HG3_Ill_Spiral_1810;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1357:HG2_Ill_GATKHCSBGrefine_1136:HG2_Ill_breakscan11_228:HG2_Ill_manta_481:HG2_PB_HySA_3316:HG2_PB_SVrefine2Falcon1plusDovetail_6038:HG2_PB_SVrefine2PB10Xhap12_1411:HG3_10X_allpass_318:HG3_Ill_GATKHCSBGrefine_1147:HG3_Ill_MetaSV_2610:HG3_Ill_manta_365:HG3_PB_SVrefine2Falcon1Dovetail_1114:HG3_PB_SVrefine2PBcRDovetail_968:HG3_PB_pbsv_1783:HG4_10X_allpass_288:HG4_Ill_GATKHCSBGrefine_1173:HG4_Ill_SVrefine2DISCOVARDovetail_1233:HG4_PB_SVrefine2Falcon1Dovetail_1129:HG4_PB_SVrefine2PBcRDovetail_960;NumExactMatchSVs=19;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.181818;PBcalls=17;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=-55;DistForward=-300;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:31342726-31343056;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1886.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:38:0|1:25:1:5:30:1|0:0:23:35:0:0/1:30:22:0/1:25:8:.:.:.
chr2	34577765	HG4_Ill_150bpfermikitraw_2208	TTTTATTTTATTTTATTTTATTTTATTTTATTTATTTATGTATTTATGTATTTA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1367:HG4_Ill_Krunchall_2411:HG4_Ill_GATKHC_2790:HG4_Ill_GATKHCSBGrefine_1185:HG4_Ill_250bpfermikitraw_2277:HG4_Ill_150bpfermikitraw_2208:HG4_10X_allpass_293:HG2_PB_pbsv_1806:HG2_Ill_svaba_2133:HG2_Ill_GATKHC_2792:HG2_Ill_GATKHCSBGrefine_1145:HG2_Ill_250bpfermikitraw_2281:HG2_Ill_150bpfermikitraw_2093;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2093:HG2_Ill_250bpfermikitraw_2281:HG2_Ill_GATKHCSBGrefine_1145:HG2_Ill_GATKHC_2792:HG2_Ill_svaba_2133:HG2_PB_pbsv_1806:HG4_10X_allpass_293:HG4_Ill_150bpfermikitraw_2208:HG4_Ill_250bpfermikitraw_2277:HG4_Ill_GATKHCSBGrefine_1185:HG4_Ill_GATKHC_2790:HG4_Ill_Krunchall_2411;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.0183486;PBcalls=1;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-53;DistBack=-15;DistForward=-36;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=44;REFWIDENED=2:34577761-34577857;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1887.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:0|1:30:2:0:27:0|1:24:0:0:14:0/1:15:21:./.:.:.:.:.:.
chr2	34643630	HG2_PB_SVrefine2PBcRplusDovetail_5577	TAACTCTCTTGGAATTTCTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGTCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_230:HG3_Ill_Krunchall_2332:HG2_Ill_Krunchall_2312:HG2_PB_assemblyticsfalcon_13316:HG2_PB_assemblyticsPBcR_12896:HG4_PB_assemblyticsfalcon_13152:HG3_PB_assemblyticsfalcon_13372:HG2_PB_HySA_3345:HG4_PB_pbsv_1808:HG4_Ill_MetaSV_2562:HG2_Ill_tnscope_181:HG2_Ill_MetaSV_2477:HG4_PB_SVrefine2PBcRDovetail_966:HG4_PB_SVrefine2Falcon1Dovetail_1136:HG4_Ill_manta_420:HG4_Ill_SVrefine2DISCOVARDovetail_1255:HG4_Ill_GATKHCSBGrefine_1186:HG4_10X_allpass_294:HG3_PB_pbsv_1790:HG3_PB_SVrefine2PBcRDovetail_975:HG3_PB_SVrefine2Falcon1Dovetail_1121:HG3_Ill_scalpel_1752:HG3_Ill_manta_367:HG3_Ill_SVrefine2DISCOVARDovetail_1226:HG3_Ill_MetaSV_2616:HG3_Ill_GATKHCSBGrefine_1153:HG3_10X_allpass_321:HG2_PB_pbsv_1807:HG2_PB_SVrefine2PBcRplusDovetail_5577:HG2_PB_SVrefine2PB10Xhap12_1419:HG2_PB_SVrefine2Falcon2Bionano_669:HG2_PB_SVrefine2Falcon1plusDovetail_6043:HG2_Ill_scalpel_1633:HG2_Ill_manta_483:HG2_Ill_SVrefine2DISCOVARplusDovetail_6466:HG2_Ill_GATKHCSBGrefine_1146:HG2_10X_SVrefine210Xhap12_1368;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1368:HG2_Ill_GATKHCSBGrefine_1146:HG2_Ill_SVrefine2DISCOVARplusDovetail_6466:HG2_Ill_manta_483:HG2_Ill_scalpel_1633:HG2_PB_SVrefine2Falcon1plusDovetail_6043:HG2_PB_SVrefine2Falcon2Bionano_669:HG2_PB_SVrefine2PB10Xhap12_1419:HG2_PB_SVrefine2PBcRplusDovetail_5577:HG2_PB_pbsv_1807:HG3_10X_allpass_321:HG3_Ill_GATKHCSBGrefine_1153:HG3_Ill_MetaSV_2616:HG3_Ill_SVrefine2DISCOVARDovetail_1226:HG3_Ill_manta_367:HG3_Ill_scalpel_1752:HG3_PB_SVrefine2Falcon1Dovetail_1121:HG3_PB_SVrefine2PBcRDovetail_975:HG3_PB_pbsv_1790:HG4_10X_allpass_294:HG4_Ill_GATKHCSBGrefine_1186:HG4_Ill_SVrefine2DISCOVARDovetail_1255:HG4_Ill_manta_420:HG4_PB_SVrefine2Falcon1Dovetail_1136:HG4_PB_SVrefine2PBcRDovetail_966;NumExactMatchSVs=25;ClusterMaxShiftDist=0.116861;ClusterMaxSizeDiff=0.116861;ClusterMaxEditDist=0.116861;PBcalls=16;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=-168;DistForward=8094;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=2:34643631-34643955;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1888.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:84:1/1:1:25:1:52:1/1:0:22:0:29:1/1:0:16:./.:2:12:.:.:.
chr2	34695830	HG2_PB_SVrefine2PBcRplusDovetail_5578	TGTCTTAGCCCAAAATCTCCTTAAGATGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAGTCAATGTGCAAAAATCACAAGCATTCCTATACACCAATAACAGAGAGCCAAACCATGAGTGAACTCCCATTCACAATTGCTACCAAGAGAATAAAATACCTAGGAATACGACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTAAGGAAATAAGGGAGGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAAGTAGAATCAATATCATTAAAATGGCCATACTGCCCAAAGTAATTTATAGATTCAATGCTATCCCCTTCAAACTACCATTGACTTTCTTCACAGAATTAGAAAAAAATACCTTAAATTTCATATGGAGCCAAAGAAGAGCTCATATATCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCATGCTACCTGACTTCAAACTATACTACGAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATACAGACCAATGGAACAGAACAGAGGCATCAGAACTAATGCCACACATCTACAACCATCTGATCTTTGACAAACCTGACCAAAAAAAGCAATTGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGTAAGCCATATGCAGAAAACGGAAACTGGACACCTTCCTTACACCTTATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAGACCTAAAACTATAAAAATCCTAGAAGAAAACCTAGGCAATAGCATTCAGGACATAGGCATGGGAAAAGACCTCATGTCTAGAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAGATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACCATCATCAGAGTGAACAGTGACCTGCAGAATGGCAGAAAATTTTTGCTATCTGTCCATCTGACAAAGGGCTAATATCCAGAATCTACAAAGAACTTAAACACATTTACAAGAAAAAAAAAAAAACCTTCAAACAGTGGGCAAAGGATATGAACAAACTCTTCTCAAAAGAAGACATTTATGCAGCCAACAAATATATAAAAAAAGCTCATCATCACTGGTCATTAAAGAAATGCAAATCAAAACCACAATGAGATACCATCTCATGCCAGTTAGAATGGCAATCATTAAAAAGTCTGGAAACAACAGATGCTGGAGAGGCTTTGGAGAAATAGGAATGCTTTTACACTGTTGTTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCAATTCCTCAATGATCTAGAACTAGAAATACCATTTGACCCAGCAATCCCATTATTGGGTATATACCCAAAGGATTATAAATAATTCTACTATAGAGACACATGGACATGTATGTTTATTGCAGCACTATTCACAATAGCAAATTCTTGGAACCAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGCACATATATACCATGGGATACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGCAGGGACATGGGTGAAGCTGGAAACCATCATTCTCAGCAAACTAACACAGGAACAGAACACCAAACACCACATGTCCTCACTCATAGGTGGGAGTTGAACAATGAGAACACATGGACACAGGGAGGGGAACATCACATGTTGGGGCCTGTTGGGGGGTGGGGGGGCTAGGGGAGGGATAGCATTAGGATAAATACCTAATGTAGATGACGGGTGGATGGGTGCAGCAAACCATCATGGCGTGTGTATACCTATGTAACAAACCTGCATGTTCTGCACATGTATCCCAGAACTTGCAGTATTAAAAAAGCAAAAGAACTAAATATATATGCCCAAACTTTAAAGCAACATTAAAAATCTTTATAGTGGATGTTTAAATATTGAAAATTATGTAAACAAAAAGTTTTTTTGTGCATATATACATACTTTAATCTGTTTGTATTTGTTTTTACCTTTTAAAATTTTTTAGACAGGGTTTTGTCTTATCATTCAGGCTGGAGTACAGTGGAAAGATCATAGCTCACTGCAACCTCTAACTCCTTGGCTCCAGCAATCCTCCCATCTTAGCCTCTTTAGTCACAGGACTACAGGCATGGGCCACCACACCCGACACATATATATATATATATATAAATTTTTTTTTTTTCTTTTCTTTTCGAGACAGAATCTCACCCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCGCTTCCTGGGTTCAAGCAATTCTCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGACGCCCACCCCCACACCCAGCTAATTTTTGTATTTTTAGTAGAAACGGGGTTTCACCATCTTGGCCAGGCTGGTTTTGAACTCCTGACCTCATGATCCACCCACCTTGGCCCCCCAAAGTGCTGGGACTACAGGTGTGAGCCACCACACTTGGCCCCGACTAATATATTTTTAAAAATGTTTTGTGAAATAAGGTCTCACTGTGTTGTCCAGGCTATTCATGAGCTCTCAGCATCCTAAAGCACTGAGATTTCAGGCGCAAGTCACTGTGCCCAGCTAGTCTCTTAGTTTTCTATGTGTCTAATATTATGTCACTTATATTTCTGTAAAGAAAGAATTTTTAAAAAATATGACATCATTGTCTTTACATAAAATTGCTATAGTCTTCAATTGTATTTAATACTTATTGTATTTAAGTTGTTTATATTTTTAATTAAAAAGTTTGATGTATCAAAATTTTTGAACAATTAAATGTCCAGTTCAGATTATTGCAATATGTGAAATATAATGGTGCTTTTTTTATAGTTTATTTATTTAGTAAGGCAAAACTTTTATCAAATACATAAATTTATTTTTACACATACATGTCTGATGTGGAGTGGAGGAGAGACAGAGAGTTTAATTTCCTGAATAGTAAATTATAATCATCATAAAACATAAAAGTTAACATATTAATGAGACTTTACAAATAAAATGACCAAGCAATAAGTGTATTACATTATCTCCTTTAATATTTACGAAAGCTCTGTGCAGTAGGTATGATTATTTTCATTCTTCAGATTAGAATATCAGGCTCAGAGTGGTTAAATACCCTGATTGGGTCACAGAAAGAACAAATATCAATTCAACAAATAACCTGGAAGTTGAAACATTTTCCTGACTATAATGTCAATGCTTCCACTTTTCACTATATACTATTTCACAGAAATTAAAATCTAGTTGCATTGTATTCAACCTCATTTAATGTTAGGTACATTCTTTAAGACCAAGCATACTGGTTCTGGAGATACACATTTGGACAAAACATGATGTTAGCGGGCTCACAGAGGTTACAGAATTCTGATCTTAGCCAAATTAGGGGCCCAATGGTGACCAATAAATATTGTCATCAGATTCTATCTATATTCCAAAACCAATAATCACATCTTAAAGTAAAATAATCTGAGGTATTTTTTAACCAATAGAATTGCCAAACAGAAGAAAAGTATGTTATTTTCAAGTCCCAGTGATCACTGTTAAATTAAGACACAAATAGATCTGTAACATCATTATCTATGGCCATAAACTCAAACTCACCTCTTATTTCCTCCTTGGAAAATTAATGTGCTTAAACATCAAAAAAGGCTAGCCCTGTACATTTACTATCTCTTTACAGAAAATGTCAGCCAGTACATATCAATTTTTGAAGAAAACAAGAATGGGAGAGACAAAACTTTTTTATTTATTTATTTATTTTTTTGCATATGTACTGTGTTACAGGGAGTCAGGTATTATTTGTAACAGGTATTAAGGCAATCACTCAACTCTCTTGTCTTCTTATGCCCTCACAACAGGGACCTTGGACAAAAACTAAACTTGAAATCTTTTAGGCTTCTCTGGTTGTTCTAAAGTGTTCAGGCCTGGGACTACCCTGGGACTACCCTTAGTTCTACAAGTGCACATACCAGGCAGTTCTGGAAAATGAGTTTTCACATGTTTGTTCTGGCCCTTGTATATTGTAAGGTCAAATGGTGAAAGGACATAGTTCAGTGAAAACTTAAAAATTCATTAGATTTTTCTCTGAGCTCACAAAGGTTAAAAACCCATGGCCATGCATGGTTGCTCATGCCTGTAATCACAGCACTTGGTGGGAGAGGCGGGCAGATCACAAGGTCAGGAGTTTGAGACTAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGGATGGTGGCGGGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGTTTGAATCCGGGATGTGGAGGTTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGTGACAGGGCAAGACTCTGCCTCAAAAAAAAAAAAAAAAAAATACCCTAAGTGTTGCTTGGAGGCAACACCACGGATTCTGAATAAGAGGGGATCACCCTAGGTCATAGAAGTCAAGTACTCTCTCAGGACAACTTTCCATTCATTGGCTGGTCTGGAAATAATTAGCCTCAAGTGCTTTGTGCATAAAAGCCATAAAATTTTCATTCTTCAGTGTGCTTACATTGTATACTTCATTAACTTCCTGGCATCTCAGTACTTTTAATTATAGAATCTTGATAATAAGTTATTAAATTGAAAAGTTGAGAAAGAGTTTTCTGAGTGGAGTGAGATGTTGAATTAGTTTTAAAATAAATTCTACTGTTTTAAAATTTTTAGCAATAGAATTGTGAAGGGCTTAAGTTGCTTTGGCATTGTAAAAATGACTGGCTGCTTCAAGCTAATTTTTAAAATAAAAATGTCAAGCCGTGTTTATTGCTTATGACTATGTATCTTAAATCACGTCTTCTAATCTGTACCACACTGTTCAAAGGACACATGAAGATACATGAAGTGATACCACTTTTCTGTAATGGTGGATTAAAGAGCTGCGTACATATAGAATTTCTTTCTTTAGGTAACACATTTTTAATAACAAAAGACTACAGAAAACAAAAGTCCTCATCTCCCCACCCCCCATGATTTCTACAATATAGGGGAGAAAAATCACTGAAAGCACATTTTGGTGTATGCATTTATACAATGACCAAAAATTTACCACCATTTTTTTTTTTTTTAAGAAATATGTGTTGGCCAGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGTCGCATTACCTGAGTTCAGGAGTTCGAGACCAGCATGGCCAACATGGTGAAACCCCCTCTACTAAAAATACAAAAATTAGCCAAGCGTGGTGGCACATGTCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCATGTCACTGTACTCCAGCCTGGCCGACAGAGTGGGACTGTGTCTCAGAAAAAAAAAAAAGAAAAAAAAGCAAAGGAAAGAAATATGTGTCAACTGTATTTAATCGTAATCTATGTGCCCTGGAGAAGTGAATAAAGGGCATTTTCTCAAGCTCTGCCTAACCTCAAAAACTCAGAAAAATTTCAGAAAGTGTTATAAAGTTTTATAAAAATCTGAACATGATCTGAAACATCATTACATTATATATTTACTATTTGGTTATAGTGCAAAAAAAGAATGTAATGAGAGGTTATTCCCCAGCTTTCCCTCCGTCTTCAATATAAAATTAGTTTTGTTATATTGTGTTTTTCTTCACCAGGTCAATCCACTCCTGGAAATTACCTTCAGCTCTCTTTGAAAATGGCTTCACTGTCTTCATTTATAAGTAAGTTTTGGTTTGTTGCACATACAGTGTAGTCCTAGCATCAATCAATTTATTTTACATGCATTTGTTTTACTGTCTTTTTCTATTGTATGATGAGCATCTTCTCACACTAATGGGACAAAACAGTTTCATAACTGTTTACATTTGTGGATTTTGGTCCTAGTTCTAAGGCTCTGGGCAGCTGGGATAGATGACAAAGTATTTGTCTAACATTTGTTTTGGGGAACGGAGAGGTTTAATTTCAAAACTGAGCTGTTCTTACTCCAAAAATATACCTTTGAAACTATCAGTTGATGCCTCAATCTATTATCCCATTAAACACTCTCCCTATTCAAGAAAACCGTGGCAGGTTTATAATGAGTTAACATCTATATTTTATAAATCCATGGATATCATCTTGCATTAATTGAATGTCTGAGAGCAACAGACCTCTGTCTAGATATGGAGGTTATAGTCATACACGCATCATTTGGACTGATGGGACAAATATCTTCACCTGGGGATAGCAATGCTGCTTAATCTTCTGTGCCAAACATTGTTACTTTCTTAACTGGTATTCATGTTTGCCCCTGGCCCCAGTCCCAACCATGCAAACTAATAGAGAGCTAACTTTGCTCAGAATGTCACCAAGATTAGTTACATTTCCCAATTCCTTGACCAGTCCTGGGTACTGAGATTTTTTAAAACTCCTGGGAACTTATTAGGAAGTTTTGCTTTCCCTCTGTGGATTGCACCCACTCCCCTCATTGCTTTCTTATGCTGGAAGAGGAGATAGAAAATGAACGTGAAGCAGCCATTTTGTGACCATGAGAAAGGACGCCATGCTCTATAGATGTTAGAATAGAAAGATAAAATTTGGGTCACTGATGGCACCTTGAAGCCACTGTACCAGTCCTGGTTGGCTGGTATTTGGGCTTTCTTGTTATGTGACAAAAAATACACCTTTTATTTGCTGAAGACACTATGAGCATCTATTTGTGAGACAGATAGCCAATGAATACTTACCGTTAAAATTGTGAGAACTGAATGAAAACCTATACATCAACTATCCCTGAACATTGAAAAAGCAGTTTATATTGATTAGGTATGTAATTATTGTCTTGTTGTTATTGTGAATGGTTAAGCTCCCACATAGAATTTTAGCAGTATGAAAATCAACTTTGTATAACAGATAGGACATGGAGTCAAACGTATTGACTAGCCACTGGAGATATAAAACTTTCAGTATCTTCTCCCAAGGAGAAGTTCTAAGAAGGCTAAAGATAAATAAAATTTTACAAAACTCTGCGATGGCTCAAAGGAGTGCTTCCTGGAAAAGACATCTGTGTTGGTAAGAAAATAAAAAGATAAAGGAGAAGGAAAACATTTAGAAGCAGAAGCAGTAAGTGAAAAGAATAGAAGCTCAATTGGGGTTCCAAATGCAGTTCAGAGTTATAGAAGCAGAGGATAATAGGCTGATGACGAGGCATGGACCTTATCAGAAAAGAACTTGATGCTGTGTTTACATCTCAGGATTTTATCCTGAAGACAATGGAGTATCTTTGCAGAATTTTAAACCAGGAAGTGTTGTGATTGGCATGTTACATAGGTCACTGGCAGAAGTGTAGAGCATATTTTGGAGAGGAAAAGTCCAGAGTGAGAAAATTCAATTAGAAGTTATGGTGATAGTTCCCCCTGAGAGATGGTAAAAATGGGGAAGTGGGATAGAATGATAACATAAAGGAATTAACAATAAAGTATTTCTTCCCCAATTGTGTGTCTGTGAGAATTTGGTAGAGGATGAGAGTGTGGCAGAAACACAATGTAATAAAATCTCTCACTACAGCAAGTTTCAACCTTGTATTCTGGACTATTAAAATTTGTTATAAATGGTAGCCAGGTGAATAAATACTATTCCTAAGGAAAAAAAAAAAAAAACAGGAAGTTTCAGAACACGGGATGATTTCTTGAAGTGAGATTTTAAAAGAAATCACCATCATTTTGTAGTTAAAAAAATAATTCTCAAGCAACAAGATACCCTTCAATAGCGAAACAGAGAAACAACCCCTGGTATATCCACAAAATGGAATACTATTTTGTAAAAAAAAGAAATGAGCCATCAAGCTTCATACTAACTATATGACTCTAACTATATGGCATTCTGGAAAAGGCAAAACTGTAAAGACAATAAAAAGAGCAGTAGTTGCCTGAAGCTCAGAGTGAGGAGAAAAGAGATAAACAGGAGCACAGGGCATTTTTAGGGCAGTCAAACTATTATGTTTGATACTGTAATGGTGGATACATGACACAATGCATTTGTAAAAACACATGGAACTATACAACATGAAGAATGAACTTTAATGTAAACTCTGGACTTTAGTTAATAATAACATATCACGGCCGGGTGTGGTGGCTCACACCTGTAATCCCAGAACTTTGGGAGGCTGAGGAGGGTGAATCACCTGAAGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGCGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGAGCGTGGTGGTGTGCACCTGTAATCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATCACTTGAACCTGGGAAGCAGAGGTTGAAGTGAGCAGAGATCGCACCATTGCACTCCAGCCTGGGCGACAAGAGCAAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAATAATAATAATAACGTATCACTACTGGTTTATTAATTGTAACAAATGTACAATAGCAATGCAAGTTGTTGATGGTAGAGGAAACTGTAGGGGCATGTGGGAACTCTGTACATTCTGCCCCATTTTTGCATAAACCAAATTTGGTCTAAAAGTAGTTAAATAGAAAAAAACCTCATCTCTAAATAAAACAAGTTCCTGTAATATTAGGTCATAGAAATATATATTTTTCAAGACAAAGAAGTCTTTGATCTCAGGCTCCTTGGCATAAAAACCATCCTCCAACAGAGGATCTCCTAACTTTACTTTTTCAAATATTTTTCTTAACAAGGAACAGAAACTTTTCTGAGCTTTTAAAAAATATTCTCAGCCTAATATTCCTTATCAGATAAAGGATAATATTCTGCAGAGATTTCAAGTGATAGATTTGTTTTTTCTTTTTTTCTTTTCTTTTCTTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGACAGGGGTGTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAACCTTTGCCTCCCAGGCTTAAGCGACCCTCCCACCTCAGCCTTCTGATTAGGTAGGACCACAGGCACACGCCACCATGCCTAGCTAATTTTTGTATCTTTTGTAGAGATGGGGTTTTGCCATGTTGCCCAGGCTGGTCTGGAACTCCCTGGCTCAAGTGTTCTACCCAAGTGATCTACCCACCTCGGTCTCCTAAAGTGCTGGGATTATAGGCCTGAGCCACCATGCCTGGCCTCAGTTGATAAATTTCTATCTAACACTTTGGATTTTCCTCCTGACTTATGAAATCTTAGGTTTTACAAAACAGTATTTGGACTTTACCCCTTCAGACCCTGCAGTTCGATTGTCAAAATCCCACAAGCATTTGTTACTCCTGTCATATGCAGTATGCACTTCTAGATGTTACCATGGCATCCGATACCATTCATCTCTAAAGAACAGGGAAATTAGTCCATGGGGAAGGTGACATTTTCTTTATAAAAAGCAACCTCTAAAGAGATATCATGTGAATTACATTATTGATCGCCTGTGACTGGTTCTCCACTGATAATTTCTAAGATTCTCAGGTGATTTCTGACTCAAGTGTTTACTTCAGAGTAAAGCCAAATAAATCTGTTTCTATGGTTATAGACAAATATTTGTATGAAACACTTTGAAAATCATACGTGGAAATTCCTTCAAAATTGGTTATTTAAAGTGATGTCATCATATGCCTATATTAGTGTACCACTTTTGACATTGCTGTTTAGGGTCAGATTCCTGGTCAGTATCTTTTTTTTCTACCAAGTATTTTTAGCCAAGCACAGTATTACCAACCTAGATTAAACCTATTTGCTGGGCATAATTCTAAATGACTTAATCACTCTTCACATGAAATATATTCTTCAATGGAGAAAATGCCAAAACTAATCAAAAGAATTTCAGGTGGGGTGCAATGGTGATTCCATAAGAATTCTAAAATGCTTTGAACAATGTGAGCATTACTGAAGTGCCGTATATTCACCTTTATTTAAAGAAAGCTACTTTTATTTGTAGGTTCCTCTGTTAGCAAATCATGCTCTTTTCTTTTTAGTCATATCATAATAAAAATGTTAAAATAAAGGATTCCGAAGGGGGAAAAGTAATAATTTTTTTTCCAACTAGTTCATTTACACCTCATAAATGATGCTAGAAGCATCAACAAAATGTTAAAAACAAAGCATGAATTTAAAGTTTAAATGTTATGAGATACTGATGTTATAAATAATGCCTATATTATTTAGGTACATCTTAGTGCCTCCCAGTAATGTGGTTTAATCCTGAGGTCCCAAATACAAATTCCATCAAACCTCCATTATTTTTGTCATTAATTGTAAAGTTACCAGATACTTAGCAGCACCAGAGATTTCTGTCCTGTTTTTTTTGTTCGTTTGTTTGTTTTGTTTTTCATCAGTATTTGTGACAATGGTTGATCTGTTTGAGCGATTTATGCCTGAGGAAAGATGTAACCTCAACTGGCAATTAAACTGTTTTCCTTATCCAATTTGCAAACAAAATATAATGCATGTGAGAAAGGTGTTTTACCAGATTACCAAACCATAAGCTAGGAAGTAGTTAGCAAGAGCTTATCTTTAAATTCCACTTCACTTGCAGCTGGTAGAAAATGTAGAAAGTGGGGGATAGGTCTCACATTGCCCTCTTTACTCCCCTAATTTGGTTGGTTGATTCAGGTATGAATTTGTCTGGACTCCTCCCTGTAGAGTTACCAGATTTAGCATATAAAAATAAAGGACACCCAGTTAAATTTGAATCTGATATTTAAATTATGCTTATCTCCCAAATATTGCGCAAGCCACACTTACACTAAACATTATATGGTATTTATCTGAACTTCAAATTTAACTGGGCACCCTGTGTTTATCTGGCAAACTTACTCCTCAGCACAGCAAAGTTGGATGCCTTTGCCTGCTTGCCATCACATTGAGGAAGGTCATACGTGTGTGGGGTCTCATGTAACCTGGTAAGGATCATATCTTGGCACACGGAGACAGGTTCATTGGCCTTCAAGGGGCTATGGTCTCTGAGCAACTACTGGGATACAAAAGGTCACATAGATGCTTGGTATGAATATGGTGGTAAAAAATCAATTATCAGCCGGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGAAGTACAGATCACGAGGTCTGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTAATAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGAGCGTCTGTAATCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCAGGGAGGCAGAGCTTGCAAGCTTGCAGTGAGCTGAGATTGTGCCACTGCACTCCAGCCCGGGTGACAGAGCAAGACTCCGTCTCAAAAAAGAAAAAAAAATTAATTATCTTGGAATCATTATAAGTTATGGCAATGTGAAATTTATGTACACCTATTCACATTAATATGTTTGTACCTGAGGAGTATGTGTGTGTTTGTGTGTATGTATGTGTGGTGTACCTATAATGAAAATGAAGTCCAGGTCATTTGTTTTGATCCTATCCACACTCTATTGTTCAAGGAAGCCATGAAGAACAATGCTTCCTCCCACAACAAGTCTTCTTATCTTAGTTTTATTTTACTGTAACCTGGCTGCCTTGTAAAAAGTCGCAGCAGAGATTCCTCAGAGTGTTTATCAACCTCAATTGATTTCAAATGGCATCAACACAGCACAGTGGGCACTTAGAAGCTTATGCCACCCCTGTAATTTACATTAGTCTTATTTTAAAGATCCTTTAGTTCACCAGGCATTTGGTAGAATGGAATCACTAAGCCATGACCATTTACTTTATGAAGATGATTGGATTAGTGCTCACCTCACGGATTAGCAATCTTTTGCTAGCCCCATAGAGGTTTCCCCTCTCTTCTGATTGTTTCTTTATAAACAAGTTATTTTATCAGATAGATCAGATAGTGTGTGCCACGTAAACTGGTGGATATATTTGCTTCCAGCAAACCAGTATTCCCTCATCCATATGTTGACTGTGGTTTGGTTAGGCATTCCTTGCAGGTTTGTTTGGTTTTCTTCCCCATTTGGATAAGATCACTGCCAGATTGTTAATTGTAAAAGTTAATTTGTTTCTGAGAATTGCTTACCCCAATTCTTATTCAGCACATTTTAAAATACTTGATTACATCAAGTTTTTCATTTCTAACTTGATGTTAGGAACTCACTTCTTTTTTTGGTTCAGAGGGTTTAGTTTCTCCACCCATGGTGGTTTTGTGAAGTAGTTTTCAGGCCTACATCAGGGCATGTCTTAACTTTTATTGCTAGAACATGCTAATGTTTGCCAATTAAATCAGAATTCTTTTTAATTTTTTAAGCTCATTATTGAAGCCTAATATGCATACAAAATATATAGTCATAAGTGTGCAACATTATTTTTACAAAGAAAATACAAAGTAAATGAATTTGCACAAAGAAAGCATGGCCAGCACCTCAGAAATTCCCCACCCTCAGGCTTCCTTCATGTCATTGTCCATCACCAAGGGTAACTACTGTCTTTACTTTTAACAGCATAATAGAAATGAATCTACTATTTTGTTTCTAGCCTCTTTTGCTCAACATCGTGTTAGTTAAATTAGTCCATATCATTGCATAAATTGTAGTTTGTTCATTCTTATTGCTGTATAATGATGCATTTCATGAATATAACCCCATCTATTTATACATTGAACAGTTGATGGGCATTTGGATACTGATGTTATGAAAATTATTTTGCATGTCTTTTGATGAAGATACACATTTCTTTTGGTACATGCCTAAAAGAGAAACTATTAAACTCTTATTTAATTTTATAACTAACACTTAACTGTTTTATTAGGATTAATACTTCTGAGGCCCCTCAAGCTTTTAACATGGTTGACATTTTAGAGCATAAAAACCTTAAAAATCTGGCTGCAACTTTAGAGCTGGGAACAGAGAACCGTGCAGTGTAATGGGGTATGAATAATGCTTGAGTCTATTGTCTCAGATCTGATCCAAGTCACCTAAACTCTCTATAAAACGGTCATAACAAAATAGTTGCTATTTATCTTACACATTTTATATGAGGATCAAAAATAATTTTTTTCTGTGTGTGTAAGTAAAATCTTAATTATAAATATAAAACATCAAGGATCCACAGTAGTATCTTTGGATATCTGGATATCTTGGGAAAATGTATAGTTAGATCTGGTTACTAGCCTTGTGAACAGGTTTATTCAAAGACCATTAATGGTCAACGTTAGAAATCCACTAGTATATCAACAGGAAATACTTCTCTATAGTCAAGAGTTGAATTCAAGTCCAGGTTTGATCATTTCTATTCAAATAGTCAATTTATCCTAACTTGATGCAGACTCCTTCTGGCATACATCAATGATTTTTAGATATATAATTCACATAGCATATCTCTTGAACACAGCCTACACTTCTAACTTCTTAAACACAGTTCCATAACTAATGCATACTGTGTGTCCTTAAACCTCTGTCCTACATCACACTCTTCCAACCCAGCACATAGTGTCTTCCACATATGACACCCAAAATGTTTTTGGTTTAACTTACCTCTACCTATAGTTTCCCATGAATATTATTTAATCAAAATTTCATTTAGAGTTCTAATCAAATCTTAATTTCCCCAGTAGAGAAAGTAGCTGTCCCTAGTTGTACCAGTTCATGCTCCAACCTAATTAGGATGCCCTGCAGGCTCCCTATGGAGTCAATACCCTTGTAAGTATTTATGAGAAGTCTCATGGAAATTTCTTGTATATACTCACTTTACTAGGTGGTGATTATTCCCTGGTATTCATTGGGACTTGGTGGTGATACACTATTGGAGACATCCTAAGTATTTCGGCTGTATTAGATACATTTCTTTATTTCTTCATTTCCTATGTGTCTACACTGGCTCACTGTCAGACTTAGATAACAGTCCAAAAAAACTAGGTTGAGTGACAAATTTAAGTAAATGAATAAAGATACCATGCTCTGCTCAGAGTTTATTTTTTATCCACTCCAACGATTGTATTAAGTCAAGTTATCATGCCTGGCTTTTTCCCTGAGAAAAAATGTATTCCCAGCAGATCCCCAAGCCTCATGCAAATTAACTTTTGGGTGACTTTAGCCATCAGTTTTTCATGCATATTCAGGGCTGTTAGAATCTCACTTAGCTTCACATAGAGACCCCATGCAAATATTCAATCTTAATCTTTATCTTATCCCAAATGTCATGGTTGATTTCACCAGACTCCTTCATACACTTAAAGCTGTACTGCTTTCCAGTTTGGGGGTAGACAGACGTAATGAATATGGAAACATGAAGTAATTAGGCCATTATTTCTTTTTCACTGAATAGATAAGGCACCTGAAAAAAAAATCACAGGCGAAGCACAATATTTACTTGCAAAGTCAAAATTACAAACATTAATTTAGCAAGAAGTGTGTATATAATCTATTAACCTTTTGTTTTGTTTCCAGCATTCCTATCTCCTTTAGCATCCACACTTACTTCCTTTCCCAGATTAAATCCCATTTTCCATTTTTCTTCCATTGTGAAAGAAAATGATGAGTACGCCTCTATTGATGAGTGCGCCTCTATTTCTCCACCATCCCTCTACCTCTCTGCATGTGTCTGTACCCATGCCACTTACTTTACCTTCCTCCTCTCACAGTGGATGGACTTTTCTACTACTTTCTAAAACTGACTCGGTCACTTGTGTCCTAGTCCCCATCCCACTTTTCCTACTCCAGGCCTTTGCTCCAGCAGTTACGTCTTCAGATTTCCCCTTTCCACTGGACCAGCAATGGCAGGCAATCTTTAGATTGCACTGAGAGTTGTTTAGACTCGCTGCCTGTGCTTCCCCAACTCATTCTTTCTTGAACACACTCCACTCAAGTACTTATCCATGAACAAAACTGAAACCCATTTTTCAAGGTTGCCATTGATTTTATCATTGTCAGAATTAGTGGTCAATTATCAGCCTTCATCTCCCTTAATCTTTAAGATGTTTTTAACATAGATAAAACCATTTGACACTTTTTTTGTTGTTTTTGAGACAGAGTCTCACTCTATTGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTTAAGACATTCTTGTGCCTCAGCCTCCTGAGTAGCTGAGACTACAGGCGCATGCCACTATGCCCAGCTAAGTTTTGTATTTTTAATAGAGACAGGGTTTCGCCATGTTGCCCAAGGTGGTCTCGAACTCCTGGCCTAAAGTGATCCACCATAGCCTCCCAAACTGTTGGGATTACAGGCATGAGCCTCTGCACCTGGCCTTGGCATATTTTTTACTTGATCTCTCCACTTTCATTTTCCTTTGACTTCACTGTCTACTTGATCTTTGTCTCTTTTATGGTTCACCCTCTTTCTCTTGATCTATACATGTTGCAGTGCCCTTATTAAGCACTGCATTAATTAGATGATCTTTCCATGTTGGACTAGCTACACTGCAATTCAGTTCTTAAGATTCCCAAAATTTTATCTCCAGTCAAAATTCTACCCTGAATTTAGGCTCCTAGTGATGGCTCCACTGGGCTCAGATCAAACTTCACCTGCCACAACTGATCTCTTGACCCCACTCTCCTCAGCTTCCCTGTCTCCCAGTGTTTCCTATGCCCATCTACAGCACCACTCCGAACCTGATACACCAGAATCTTCCCCTTATCCTTGCTGCCTCTCTTTTTATTGCACCGGAGAGCAACACATCTCATATATGCCGCCTTCACAATACATTCAAACAAAAACTCTGAAAAGGTCCACTTCTATAGCATTGTCTGAGGTATTGTTCTTTCCCACATAGATTTTGTACTATACCTTCTGAACTAGTTCTGCTGCTGCCCTCTTACCAAGCCTTCTGTTTGCCCCCCACATATCAACCTTTGAAATATAAAACATGATCTATAACTTTCTTGCTCAAAACTACTCAATGTCTTCTCATCCCAGTGTAATAAACTTCAAGGTTCCTGCCTTGTGCTAAGAATTCCTGCTTTTAGGATCTGGCTCCTGAGACCACACTGGCTGCATAACTTGGCTGTCTTTCCTTTGCTCACACACTTGCAGCAATACTGGCTTTCTTGCTACTTCTTAAACAAGTTAAGCAAGTTCCCATCCCAGGTCATTGTACCTTGTAGTCACCCGGTCTAGAACACATAAACTGTTGCCTCATTTTATGCAAGTTTCTGTCTAAAAGTCTCCTCCCTAGAAATGAAAATAATTTACTTATCAGCCTGTCTACAATAGCCACCCCTACTGGTCAGAACTCCATTACTCTGGGCTATTTTTCATCCTAGAGCACGTGTGTATTCATGGAGTTTTGTTTTTTCCTTCACTTTTGGCCCATTTTAGCCACTTAATTGTAAAATGCATATAGTCAGAGCCTGTATTTTGTTTACCATTCTATTCTTGCACATATAACAGTGTCTGACATGAAGTAGGTGATTAGTAAATATTTGTTAAGTACATGAATTAAATCGGAAGGAAATAACTAATTATTTATCTGGGAATGTTCAGTCTTTTTAGAAGCACCACGAGTTAACAAATGAATCTTGTGTTTGTGAGGACAAATCTCCCCAAATCCCCACTGCAGAAAGAGGAAGGAATTTTTTTCTAAATAGTCTGGTTAAAAAACAGGTGGTGGGGGAGGGAGAGCAATTCAGAGAGACTTTGGGTGTTGGCCAAGTCCAGGAGATGGGAGAATGGATCGCAATTGCCTAATGCAGCTCAGCGATTGGTTTAGCTCCTAACCAGCTTCCTTGCTGCTTCTTTGTTTGACTGACTGTCCTTCACATTCTTCTCTACTGATAGAGTTTGTTTTTTGTTGTTGTTGTTGTTGAGATGGAGTCTCACTGTGTCCAGGCTGGAATGCAGTGGTGGCGTGGTCTCTGCTCACTGCATACTCCACCTCCCAGGTTCATATGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGACTGTAGGTGCGTGCCACCACACTTGGCTAATTTTTGTATTTTTAATAGAGATGGGGTTTCACCGTGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCCAGTAATCTGCTGCCTCGGCCTCCCAAAGTACTGGGATTATAGGCCTGAGCTACCTTGCCAGGCCTCTACTATTAGGTTTTAATGATAGCAGAATGGTGAAGTCCATGTGACCGTGGACTTGCTTTTAAGATTTCAAAAACCATTTTTTTTTTTTTTGAGATGAAGTCTTGCTCTTGTCCCCCAGGTTGGAGTGCAATGGCGTGATCTTGGCTTACTGCAACCTCCGCCTCCCGTGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCCACCACGCCTGGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTTCCGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCACGCCTGGCCTGAAAACTTTTAAGATTTTGAAAAACATGGAAGGAATTTGTAGTATTTTGAAATTACTTATTATGTAGATATGTTCTTTATTTTTCTTTTTAAAATTAAAATAATTGATGTAACACATGTCAAGAGAGATTTTAAACGATAATATTGAAACAAATACCTGGGCACTCACTATTTGGTTGAAGAACTAAAACATTACACTGATATATGTGAGGCTCACTGTGTTCCTCACCTTGTCTAGATTACCTTCCACATACATATACCTTGCAGGAAACCCCTGTCCTGAATGATTAACCATTCCCTTAGTTTCTTTATAGTCTTACTACATATTCATGTTTTCCTGAAAATATCAAGTTTAGTCACTTTGAGTAAAAATAATATTCTATTAGTATCCTTTTATAATTTGCATTTTCACACAAATTACTATCTGGGCAGGCTGCTGGTGGGGAACTGTGTTTTTTTTTTCTAATTTACATTTTTATGTTCCCTTTTATGACTCCCATCTTTCGTGGGCGCTAGCTTTATCTCTTATTTCTTGTTATGCCTGTCAAGACTCACTTTTAGCCACCAGGAATTCATACACGCAATTGGATGAACATGGATTCAGGATATGCCTGCTTCCCTGGATGCTTTCTAGTCGTTTCTAGAGTCCAAGGATTTTTCTTATTTCCTTCTAGTTCAATAGTTAATATAAAATATTTAAAATGTGTATTTGGCACATTTTTTGGATATTCTTTATTGGCTTATCTACTTCTATGGGAGGTTAATCCATCCTATTTCTTTCTTTAATTGTGACACCAACTCTGAGACTGAACTGTTTGAATGTTGGCTTTATGATAGATTTAAATGAGGTCTTACCTTAGGTAAACAATGGTAGAGAGGGCATAAGTGTCTAGGAGATTCCATGAATTTGAAACTAGATACTTTCATGTGACAAAGGCAGGTATGCCCATCTCCTACAATATGAGTGACATCAACACTCAGCCACTGCTTGCTATGTGCCATGCACATTTCTAACCATATTATTTAATTCATTCAGTTAATACTCACAGAGGTTTTATGAGGTAGGTGTGAACTTTATAACATTTTTTAGATCACGAAACTGAGGCACAGAGTGCTTAAGAACCATGCTCAAGTTCACAGTGAAGAAGTAGAAGAGCTGGAATCAAAGAAGTCTAAAGAGAAAAACAGCTGTAATATGTTCACAAGGATCACTGAAGATAAGAAATAGAAGACTAGAGTAAAGAAGAGAGATCTTGAAAATACCAGCCGTTGAGAACTCCCAGTGGGGAAGAAAGATTTTTTTCTCCCTACTCAAATTCAGTCTTCTTGTAAGTTTCTAATCATGTGTGGCCATTTCCAGTGTCATAGCTGACTTTCTTTGGTGTTAGCAAAATCAGGCAGGAAAATAAAAAAAAATAAAATAAGGAAAATAAGAACCAAATACCCTATCAGAGATGTTGGGTTACTTGAAACACTATAGTATAAATACAGCTAAATGCCCTTTAGAGACAAGGATGTGCACTCTCACCACTCTTGTTTAACTTATTGCTGGAAGCTCTTACCAGAGAAATCAGGCAAGAGAAGGAAATAAAAGGCATCTACGTTAGAGAAGAGGAAGCGAAAATTTTCTTTTTTGCAGATGACATGATCTTATATATAGAAAAACTTAAGTACTCCACCAAAAAGGTCTTAGAACTAATAAATTTAGCAGAGTTTCAGGATACAAAATCAGCATAAAAAATCAGTAGCATTTTTACACACCAATAACAAACTAGCTGAAAAAGAAATCAAGAAAGCAATCCCATTTACGATATCTACAAAAAAACCTCTCAGAATAAATTTAATAAAGGAGTTGAAAGATCTCTTCTATGAAAACTACAAAACACTGATGAAAGAAATTGAAGAGGACACCAACAAATGGAAAGATATCCCATGCTCATGGATTAGAAAAATCGATATTGTTAAAATGGCCATATTGCCCAAAGCCATCTACAGATTCAATGCAATCCCTATGAAAATACAACAATTACAGGATTAGAAAAAAGAATTATAAAATTCACAAGGAACCAAAACAAACAAAAAAGCCCAAAGAGCCAAGCAATCCTGAGCCAAAAGAACAAAGATGTAGACATTACCTTACTTGACTTCAAAATATATGACAAGGCTCTCGTACAAAATAGCATGGTATTGATATAAAAGTGAACAAAAGGGACTATATTAAACTAAAACCTTCTGTAAAACAAAGGAAACAATCAGTAGAGGGAAGAGGCAGTCTGTAGAATGGGAGAAAATATTTGTGAACTATTCATCTTATAAGGGACTAATATCCAGAATATACAAGGAACTCAAACAAATCAACAGCGAAACAAAACAAATATTTCTATTAAAAAGTGGGCAAAGGATCTGAACAAATGTTTTTCAAAAGAAAGCATACAAATGGCCAACAGGTGTATGAAAAGATGCTCAAGATTACTAATCATCAGAGAAATGGAAATTAAAACCACAATGAGATATCCCCTTACCCAGTTAAAATGGCTATTATCAAAAAGATAAAAAGCAACAGATGGTGAGGAGGTGGAGAAAAAAGAATGCATACAGTTTTGGTGAGATTTTAAAGTAGTGCAGTAGTGCAGCCATTCTGGAAAACAGTATAAGTTTTCTCAAAAACTAAAAATGGAACTATTATACAATTCAGCAATCCCACTGCTTGGTATTTATCCAAAGGGAAGAAAACCAGTATATCAAAGGGATACCTGCAGTGCCATGTTCATTGCAGCATTAATCACAGTAGCTGAGATATGGAATCAACCTAAGTGACCAGTAATGGACGAAAAGATAAAGAAAATGTGGTATATATACACAATGGAATTCTATTTGGGGGCACAAAAAATAATGAAATCATGGGAGAGAAAATGAATGAATGAATTAAGCCAAGAACAATGAAAGCTTGTGAATCTGGAAAAAGGGCTGAGGAGGTAATAAGTTCTAAATTGGCAGGTTTAATATGTGTACAGAAAGAAAAGAACTGGTGGAAGTACATGAACGCAAAAGGGCATGTTCTGATAAAAATGGGCATCAGAGTCTTATCAAGGAAATACACCAATAAATCAGAGCCGTAGAAATGGTAGTTATGACAGCAGGGATTGGAATCCAAGAATTGGATGCTAAGGCAAGACAACAGGAGTTTCACAACTGGATGACCAAAACATAGCAAGTCAGACTTGACAATAAGCTGGATAAATCTGATTAATGCTCTTAATATTCCCTGCTTCCCAAGAATTAATTTTTCAGTTCATGTGGTAGAGGTTGAAAATAAGGGTAGTAGTTTAGTGGCCACATCTGCTAAGTTTAAAAAGAGCGAGGGACGAGGAGCCAGGTGGACCATTAGCAAGCTTAATATGCCATTAGAACCAGTCTTGGCAGCATGGCCTCTGTCACTTAAGTTAACAAAAACATCATTAAAATGGTCACCTTTCAGCCAGGAAACGACGGATTATTGCCTTCCTGGTCCCACCTTTCTGCTCTGTGTTCTCGTACTTGTTCCTAAAAATCTAGTGCTGTCAGCAAGAGTGGATAACAGGAAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCACACCAGCATGGCACATGTATACGTATGTAACTAACCTGCACAATGTGCCCATGTACCCTAAAACTTAAAGTATAATAATAATGATAAATAAATAAATAAATAAAAAGAAAGAATAAAACAAAATACTTTAAATAAAAATTTTAAAAAATTAAAAAAAAAATCCTTTTTTTAAATTTGCCTCTGACCTAGACTGTGGCTCAAGATTCTGTTGAATAGATGTGTTCAAAACCATCATTAAATATTTTTATCCTGCCAAACAAAATCATAAGAATGCTATTTTAGAATAAATTTATTTGGATACTAAGAAATTCTATTACTACTTTCTATGCCAAATATTTAGTAAATACTGACCTAAATGAGTGTCTTTTACAATATACCCTATTCATGTTGACTGCTTTAATGAAGTGTATGAAGAATAATGAACCTGAAGACTATGGAATTATATGTTACAGATGTATAAAGTCACTAGAGAAAGATGAATAAAGGGAAAAGCAAGTTCAAGTCAATAAAAGATTAAACTAACATTTGGAAGAAGCTAATGGAGGGTCAGCTGGCAATGAAAGCTCAGCCTCTCTCATTGAACTGAGTCCTTGCAAACTCACTAGCCCTTCTCACTGCGTGCACACCACCACAGTAAAAAATGGTAAAATTTTGAGCTAGGGGAGATATTGGAGATTATCTAATCCTTCTAGCCTCTCATGTTGAGGATTGTGTAACCCAGAGAGGTTAAGAGACATGCTTAAAATAAGACAGCGTCATGTGGCAAAAGTAGCCAATTATGGCAAACATTACACAAGTTTCAAGGAAGAAACAAACAGAAACTAAAAAGATCAAGCAGGTGTTTCATTGGGCTTCTTGGGGGAAATGCTTTTGTTAATGATTCATTGTCTTTAGTGTGAAGTTTATCTGATATAATTTCAAAATGATTTTTGTCTTAGTAAGGTCAGATAAGAAAAAATATCCTTAAGGAGACTTTGTGTCAAGAAGAGGAGGAACAAGAAAAGTGAGAGAGAGTGTTAGAGGAGAGAATGATAGAAAGGGAAGTGAAAGCCTTCAAAAGGTAAAAGAGAGCAACATAAGAGACATATTTGTGTGATTCCTTCTTGGACACTTGGATTTGCAACTTGGAAATGTTTCAATTAGAGTGTCATTATATAGCGATCAGTCCTGAGAACTTAATGAGAAGAGTGAATTTTGATTATCTGAAAGTGCTTTCTCACTTAAAAGAGCATTTAATCCAAAGGACAGTCTCAAAGCCTTTAATGGGACAGAACTACTTGCCACAAAAATATAACATCAATAATTTCTCCGTTAGTTTCTCATTATTTGTATACTTTCCAATTAGACTGCAATCCAGGAATCTCTCTCTTTCTCCCTTGCCCCCAACTCTCTCTCTCTGAAACACACACACACACACACACACACACACACACACACACATTCACCATTACCTCTTTGTAATTGGCTCAAGCTTTGCTTTTTGTGTTTGTTTGTTTTGTTTTTGTTTTTGTTTTTGTTTTTTGAGACAGAATTTCACTGTCACCCAGGCTGGAGTGCAGTGGGGTGATCTCGGCTCACTGCAGCCTCATCTCCCTGTCTCAATTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACCACAGGTATGCACCACCATGCCCGGCTGTTTGTTTGTATTTTTAGTAGAGATGGGGGTCTCACCATGTTGACCAGGCTGGTCTCAAACTCCTGAGCTCAAGCAATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGGCACTGCGCCCAGCTGGCTCAAGCTTAAATGTGAAAAAGAAAACATTTTATTTTAAGTAAGTAAAAATGAAATAATTACTTTTCTTCCATTTACCTGCCTGCTATTATTGAGAGGTGACAGCATGCTGGCAGTCCTCAGAGCCCTCGCTTGCTCTCGGCACCTCCCCTGCCTGGGCTCCCACTTTGGTGGCATTTGAGGAGCCCTTCAGCTCCCCCACTGCACTGTGGGAGCCCCTTTCTGGGCTGGCCAAGGCTGGATCACACTCCCTCAGCTTGCAGGGAGGTGTGGAGGGAGAGGCACGAGCGGGAACCAGGGCTGCGTGCGGCGCTTGCGGGCCAGCTGGAGTTCCGGGTGGGTGGGGACTTGGTGGGCCCCGCACTCGGAGCAGCCAGCCAGCCCTGCTGACCCCGGGCAGTGGGGGACTTAGCACCCAGGCCAGTGGCTGCGGAGGGTGTACTGGGTCCTCCAGCAGTGCCAGCCCACTGGCGCTGCGCTCGATTTCTTGCCAGGCCTTGGCTGCCTTCCTACGGGGCAGGGTTCGGGACCTGCAGCCCGCCATGCCTGAGCCTCCCACCCCCTCCGTGGGCTCCTGTGCGGCCCGAGCCTCCCCGACGAGCGCCACCCCCTGCTCCACGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAATGCCAGCGCATGGCACAGGACTGGCAGGCAGCTCCACCTGCAGCCCTGGTGCGGGATCCACTAGGTGAAGCCAGCTGGGCTCCTGAGTCTGGTGGGGACCTGGAGAGTCTTTATATCTAGCTCAGGGATTGTAAATACACCAATCAGCACTCTGTGTTTAGCTCAAGGTTTGTGAGTGCACCAATCGACGCTCTGTATCTAGCTGCTCTGGTGGGGCCTTGGAGAACCTGTGTGTCGAAACTCTGTATCTAACTAATCTGATGGGGACGTGGAGAACCTTTGTATCTAGCTCAGGGATTGTAAACGCACCAATCAGCACCCTGACAAAACAGGCCACTCGGCTCTACCAATCAGCAGGATGTGGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCCGAGCCAGCATTGGCAACCAGCTCTGGTCCCCTTCCACACCGTGGAGGCTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTACTGCTCGCTCTTTGGTGGGTCCACACTGCTTTTATGAGCTGTAACACTCACCGCGAAGATCTGCAGCTTCACTCCTGAGCCCAGCGAGACGACGAGCCCACCGGGAGGAAGGAACAACTCCAGGCACGCTGCCTTAAGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTTACTCCTAAGCCAGCGAGACTACGAACCCACCAGAAGGAAGAAACTCTGAACACATCTGAACAGGAGAAGGGACAGACTCCAGACGCGCCACCTTAAGAGCTGTAACACTCACCACGAGGGTCTGCGGCTTCATTCTTGAAGTCAGGGAGACCAAGAACCCACCAATTCTGGACACATTATGACCCAAAATTTTGCAAAAAAAAGAAAAAGATGAAAGTGGTTAAAAATTTAATGAAATAAATATGTGTGAAGTGCCCCCCGTGGCATATTGAGCGGGCTAATTCCTCAGGTGTGTGAAAGAAGAGTCAGCTATCAAATAGTTCATATTAGGCAGATTTTCTTTTTGTCCAGAAAGTTGGAAAATGAGTTTAAGACATGGCAAAACCTCAAAGATACTGCCAAACTAGCAGCAGTTTAAAGAGAAGTCAATAAATTTATCAATTCCAAGTGGCACTTACCACCCAGTGTTTACCAACATTATTGGACCCAGGGAATGTTGTTTTCTGACTAACACAGAGCTTACTGAAAGAATAGTCTTTCAATAACACATAGTTAAAGACAAAGCTTTGGTAATACAGAACTGGAAAATTAGCAAGTACAAAAACAGGGAATTTAATAGTATAAACTGCATACAGAGACAGAAGTAAGAGACTAATAAAAGCTACAGAGAAATATTTGGCTATAAGAGTAGTTCAGCATCAGTAGAGGAGAGGAAAACAGCAGACCTATTTTTACACAAGACAGTCCCATCTCATCATTCATACTGAGGGCAAGTTACACAGCAAGGAGTGAGCAGCTCAGAGCAGCTGTTTGTTACGCAAATGGGGTTTAGAAGATATCATTCTGCCCGCTTAATTTGGTAGGCCCCTTTAACCTCAAAAAAATTGGAATGCAAAATGCTAGTTGGAAAAACATCAAAGCTGAAATATTTGTACTTTCAGACTATATGTCATTATTTTAATTAATTTTATTCTTCTACAACCTATTTTCTAACACACAACTGAGAACATGCTTAGGGCAGCTTTATCACCATATGTTATAAACTGAATCATGCCCTGCCAAAATTAATATACTGAAACCCTAACTCATAATGTAACTGTATTTGGAAATAGGGTCTTTTTTGTAGGTAATGAGTCACATACATGAGACCCTAATCCATTAGAACCGGTGGCCTTACAAGAAAAAGAACAGAGGAGCTCTCTCTCTTTTTGCCATGAAAAGACACAATGAGAAGGCTGCTGTCTGCAAGTGAGAAAGAGAGCCCTCGCCAGCAACTGAATCAGCCAAAACTTGTTTCTGAACTTCTAGTTTCCCAAGCTCTGAGAAAATAAATTTTTATTTTTTGTGATTCAGTCTATGGTGTTTCATTTTGGCCATCCAAGCATATTAATATACCATATATTTGGTATAGATTAACTTTTTCTATCTTAATTCTTTTATTAAAGTATTTAGTGAGCATTTACAATTTGTATGCAATTTCTTAGACAATGGAGGCATAAAGATGAAAATCACCTCTTTGTCATCCTCAAGGAGCTTAATTTCTCTGTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTCTTTCCTTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTCTTTTTTTTTTTTCGACAGGGTCTTGTTCTGTTGCTTACGCTGGAGTGCAGTGGTGTCATCTTAGCTCATGGCAACCTCTGTCTCCCGGGTTCAAGTGATCCTCCTGCCTCAGCCTCCCAAGTCGCTGAGATTACAAGTGTGCACCACCAAACTTGGCTAATTTTTGTGCTTTTAGTAGAGACAGGGTTTCACCATGTTTGCCAGGCTGGTCTCAAACTCCTGACCTTGAGTGATCCACCCATGGTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGTCACCGTGCCCAGCCAAGGAGCTTAATTTCTAATAGCAGAGAGGACAAGTACATAAATAATTAAAAAACAAAGTCAAAAGTTATGAATATCTCATGAGAGTGACAGAAGCATGCTATTATAGTTCATTCAACATTCAACAAATATTTATTGCACACTTTTTGTCTGGCAAGTACCTCGAAGGGTGCTGGTGATACAGTGGAAAAAACCTCTGCCTTCATGGAGTATGTATACTAGTGGGAAGACACAGACATGAAGTAAACAAAAAATATAATGCATTATGTCATGGTAAATGTTTCAGTGTGAAATAAAGCAGGAGGGGGGATAGTAAGTGCTGGCAGTGATAGAGAGTGCTGGGGAGTGCTGGCAAGCCTGGGGGTTTATATGGGAGTTGGTATGAGATCTGCTATTTTCAGGATGGTAGTCAGGTAAGATTTCTCTTAATAAAGTTAAATTTGAACAATCACCTAACAGAATTGAGTAACAGAGCCATTAGAATATTTGGGATTGAAGTGTGGGATACTTTGAAATGTGGCCCCCTAAATTCTGTCATTGAAAATGTCAAGAAATCCCCATTTTATCTGAGCAGGATTATAACTACTTCAACCAACACAGTAGGGAGGAAGTGATGCTGTGTAATCTGAGGCCATGTCATCAAAGCCCACGTAGCTCTCATTTGTTTTCTTGGGATGCCCCCTGTGAGGAAATCCAGTAGCCATGTGAGATATCCACCTACTCCGAGACTACCATTAGAGGGAGAACACATATGGTGTGAGTGTTATGTTTGACAGTCTCAGTTGAGTTTTCAAAGAGTTGTCAAGTAAGAATTGCCTAGCGTGGTCACGGTGGCTCACTCCTGTAATGCCAGCACTTTGGGAGGCCGAGGCTGGCAGATCACAAGGTCAGGAGATCAAGACCATCCTGGCTAATATGGTGAAAACCTGTCTCTACTAAAAATACAAAAAATTAGCCAGGTGTGGTGGCATGTACCTGTAGTCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCTGAGATTTCACCACTGCACTCTAGCCTGGGCAACAGAGCGGACTTCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTGCCTAGTGAAGTCCTTCCTGGCTCACAAAATCATAAACAAAATAAATAGTTGTCATTTTATACCAATAAGATGTAGGGTAATTTGTTATGCAGGAATGGTAATTAGAACAGGTGTGGAAGAGTACTCCAGACATGATCAGTAAGAAGCGGCATCAATATTGTAGGAGGCCTAAACCAAGGTGAGCAAAGGAAAGAGTCAGGGGTGGGGATGGTGTGGTACACATATCAAGTAGGGACTCCTAGGCTCTTCTGTTTTCTTGTGAGTTGAAAACTACTGAAGCATTCTGAGAAGAATTGCATAATCTAACCTCACATTTTTAAAGGATCACTCTCACTGCTTTGTGGAAAAAAGACTTAATGAGCAAGAGTGGAAGCAGGGAGTCCAGTTAAGTGGCTATTGCAATAATCCTGGGGAAAGATGGTGGTGAAAGTGGTCAGAGTCTACATACATTTTAAAGATGGACTTGCTAATGGATTGGATGTGGAAGTGAGAAAAGGAAAGAAATCAAGTTTCATTCTTGGCTTTAGCCAATCAACTGAAAGAATGGAGTTCTCAGTTTCTTATATGGAAAATACAAGCAGAAGAACAGATTTGTAGGGGGAAAATCAATCATGGGATTTGGTTAAATTTAAGATTCATGTTAGACATACAAGTGGAGATTTTTCATAAGTAGATGGATACACAAGTCTATAGTTCAAAGAAGTGGTTGGGACAGCATTATACATTAAGGAATCATGACAGTATAGATGATGTTTTAAAACAAGATCCTGAGTAAGTTTGTGAGGTAGATAAAGAAGAAAAGGGGTCTGAAGTCCGAGTCTCAGAACACTATAAAGAAGCTGGAGAGATTGGAGGAACCAGCAAAATATGCTTTGAAGGAGAGAGAGTGTTGTCTCAGAACTCAAGTGAAGTGAAGAATTTATCAACCAATAATAAAGTAACATTAGGACTGAGAATTGGTCTTTGCTTTTATAGATGTCAAGAGCCATTTTGCTGCATTGGTGGGGAAATCTGATTGGAACCATCAAGAAGGAATCAGGGGAAAGGAATTGGAGACAGCAGAGTTGATAATACTTGAGAAGTTGTTCTGTAGAGAGCCACAAAAAATGGGTGATTTCTAGATGAGAGTGTGAGATTTTTTTTCTTAATTATTGATAAGACATACTGTAGATAGTTCTGATGGAATGGAGGTACTGATGGGAGAATGCTTCAGGTTTTTATGCTGATGGTATTCATCCAGTAAAAGGTAAACATTTGAAGATTAAAGACAAAGTGTACAATTATTACAGCAACTTCCTTGAATAGGAAGAAGGAATATAATTCAGTACATGAGAAGGGGTTGAATTCAGTAGCTGGCAGAGTTCATCCATATTACTAAGCTTGAAGGCAGAGCATGAAGATACAGAATTAAATATGCTTGCAGAATTTGTGGTGGAAGAATGGCAAAGTTCCCTCTTTCTTGCTTATTTTTTTAAGTGATATAAAAATCACATGAGCTGGGAGTGAGTAGTGTGTAAAGGGATATCAGAGAGTTAAGGATATGCAGTAATTGCCTGGGAGACTAAAGAAACTAAAGCAATGTAGCAGGACTGCCAAACAGCTCTAAGAACCCATCTGAAGTCAGTCATAAAATGTGGAAAGTGGGGCCAGCCAGCAGAATTAGGAGTTTATCTTCAGCTACATTCAATTGCCTGATACCACCACAGAGAAGATGGGAAATTGGATTTAGCTAGGGTTGAAGTTTTCCTAGGTGGTATAACACAGTGAGAGGGCAACAAGAGAATGAAGGTGGTATGCAAGGAGATGACCATAATATAAGCTAAGGAAAGAGTGCAGTAGGGATATGAGGGAACAGAGAAAATGTCATAGGATTGATGGGTGGTAGAACTGATAACGTCAAAGTGTCTGGGGAGGCAAAGTATGGGAGTGAGTGATTGGAAAAATAAGAGGTAGGCTGGAGAGGGAAATTCTTGAAATTGAGATTACGGATGTGATACATTATTCTTAATGAAAAATGGAATGTGCCAGCCAGACACGGTGGCTCAATCCTGTAATCCTAGCACTTTGGGAGGCTGAGGCGGGCGGGTTGCCTGAGCTCAGTTCAAGACCAGCCTGGGCAACATGGTGAAACTGTCTCTACTAAAATACAAAAAAAAAAAAAAAAAAAAAATAGCCGAGCATGGTGGTGTGTACCTGTAGTCCTAGCTGCTTGGAAGGCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGGTGGAGGTAGCTGTGAGCCAAGATCCTGCCACTGCACTCCAGCAAGGTGACAGAGTGAGAGTCCGTCTAAAAAAAAAAAAAAAAAAGAAAAATGGAATGTGTCCATGAAAATGGGTAGAGGGCAAGATTATCTACATGAAATTGGAGAGAGGCACACACATATTCTTGAAACGTGGGTGTATGCAAACCATGGAGCCATAGATGACTGAAATAAGGAAGAGTAGCAGGTGTTATAATGTGATGGCATGAGTTTCAAGGTGAGGTGGTAGGTAGGATGGGGGTTGGGGGCCTGTAGTTCCGAGGAAAAAAAATTGAAGTAACATTGAAGAGCAAGAATTATATCCATCTCTTTCCAGGACCAGTAATTTGAGGGTATGGAAAAAAACACAGCCTCTACTTGAGAGAGTCACAGGGAAATTGGTGTCCTCATGGAAGAGCCAGGTTAGAGCAAGTAGATGGACAGTTTAGATTATATGGGTTCATTGGATTTCTTGTGGAGAATGATGTGCACAGGGATGTGGGCACAATGGAATTACCCCCAAGTTCTGCTGGGCAGATTGGGTTGGTAAAACTGGAGAGGAGCGGTTTCTTTCAGGTATATTCAGGGTCTCACTTCTACTGCTAATGTGTGAGGCTGGGGGACAGGCTGTATTATGGGGACCATGTGGATGTAGTTCAAATAAGCGAGTTGTTTTCGTCGAAGGGCTAGGAAAAGTTGTGGGTATTTGAAATTGACATGCTTATTAGATACTCTTATAGAACGCTGTTTTTTTTTTTACCAGAATATTGTACCAATTTTTATTTTATAGTATTTGTTTGTTTTGCTTAATGTCTGCTTACCATGATGGGTTAGTTATAAGCTCCTCAAGGGTAAGGGACAGGTCTAACATATTTGTTCATTTTCACAGTTTGTAGCACAGAGATGCTTGCTATGTACCTATCAATAACTACTGAGAGAGAGAGAGAGAGAGAGAAATAAAGAGAGAGAAATAGACTCAAGAATAGCATTTACACTTACTTGGTATGGGGGTTGTCAAACAGATCCAAGATACATTAAGTTTCTAAAAGTCCAGGTGAAGTCTATGGCAAAGTAGAGGCAATTTGCCCTGCCTAAATGCTTTTAAATATCAACAAAATACATACATACATATATATACATATATATATATGTAATATAAAGATAAATACCCAATATTTAGAATATAGAATGTTTAATAGAATAGAATATGGCTGCCTCAGGCAGCCTCTATCTTCACGCGAGCAGGGGGACTACTATTTTCTATCACCTGAAAATCTCGATGAAAGTGTTTTAGCCTAAAGATGACTTTATGCCTTGCCTTCTCTGCTCTGTTTCTCTGGGAAAAGAATGGAAATAGTTCATGTGTAGTCACATGTTTGAGTGCCTGAAGGGGGCAGGTTTGCTGAAAAGAGACTTACTTTAACAATATATAACTTTTAGGACAGATAGAAGCAAGTTCTGAACAAGTAATAACACTGCGTTTTTGGCCCTTTGGCTCTGAATAACAGCAAAAGTACACTAAACACTTTTTCATTACATTGCTTTTAGTTTCTTTTGGTGCTCTGTGTCTGTATCCTTTTTTAATTTTCTGTGTCATAAGCGGTTTCACGCAGAAGTCTGTGCTTTTAAGATGAGAATTTTGTAGTGATCTCTTGCTAAAATACCAGGCCAGTAAGGCAGTTCAGAGAGTTGAGAATATTTTACTGAAGAATTAGTGTGGCCTGAGTAGGGGGAGATGACCTACATTTTGGGAGAATCCATCTAGAGAAAAGGTCAGCAAACTATTTCCATGAAAAGCCAGAGAGTACATAGTTTGGGCTTTACAGGCGATATGGTCTCTATCCTAACTACTCAGCTCTGCCATTGCAGCATGAAAGCAGCCAGAGACGATGCATAAATAAATGGGTGTGGATGTTTGCCAATAAAACTTTATTTTCAAACCCAGGCAATTGGCTGGATTTGGCCTCTCAGCCATAGTTTGCCAACCCCTGATCCAGAGAATCCAATTGTTGCTGCCACAGTCTGGCCCTAAGTATCTCTTCAACAAGTCCTTCATTAGTTTCCCTGTCTCCGGTTGGCCTCTCACCATTCTGTCCTCCACATGTATGCCAGAGAGATTTTTCTACAACCCATATGAAATCATGTCATTTTTCGGCTTCAGTTCCTTTGTTCTTCGATCATATTGTCTATGTCTGTCACTTAGCCATGTTTGCTGGGCTGGTTCATCTACTGCCTTCTCAGACATGGCTTCAAATTATATCTGCTATTGAAAACTGACTCTTCCACCCATAGGCAAGCCTGTCATCAGGGCCCCACTTTCCCCAACTACATTTCAAGTATGGCTGAAACTTAGGTTCTGTCTTCCCCATTGACACCGAGACTGCCTAGACAGAGGTAATAAAACTTCCTTCATATGAAGGAATCAAGAAATATATTAGTAAGGGTAAAACCTAGCGAGGCAAGATCTCAGCTGTTTTAGGCCTTCAAAGATACTATTTATTCTTTTTTTTTTGTGACAGAGTCTCATTCTGTCACCTAGGCTGGAGTCAGTGCCATGATCTCCACCCACTGCAACCTCAGCCCCCCGGGTTCAAGTGATTCTTTTGCCTCAGCCTCCCAAGTGGCTGGGACTACAGGCGTGCACCACCATACTGGCTAATTTTTGTATTTTTAGTAGAGTCAGGGTTTCACCACGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCATGATCCACCCGTCTCGGCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCTGGCCGATACTATTTCTTCTAATGCACAATTTCACTGAGCTTTGCATGACACTCCTCACAGTCTAGACTGTTCAAAGTCTAGAGTTCCTATATATATACAGCAAACAGATGGAAGGGGTAGTGAATGAAGTAAAATTGTTCAAGTCTAGAGTCCCTAGACTTTGTTCTAAAAGTTCTTAAGGCTGCAATATTTGCTAAGCCCATTTTCACTTCTTGCTGATACCAATGCATAAAGTATGCTTTTATTAAAAAATGCATTTTTAAAACTTGCATTTGATCAGTACTCTAGCCAAGGTCATCCCATTAATCTTGCACTGTTAAGATCTTAGAAAGATATTTCTTTGACCCAGCAATCCCATTACTAGGTATGTACCCAAAGGAATATTAATCATTCCATTATAAAGACACATACACTTGGATGTTTGTTGCAGCACTATTCACGATAGCAAAGACATGAAATCAACCTAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGTACATATACACTATGGAATACTATGCAGCCATAAAAAGAATGAGATCATGTGCTTTGCCGGGATATGGATGGAGCTGTAGGCCATTATCCTTAGCAAACTGAGGGGAAACAGGAAACCAAATACTGCATGTTCTCACGTATAAGTGGGAGCTAAATGATGAGAACAACTGGACACATAGAAGAGAACAACACATGCTGGGGCTATTAGAGGGTGGAGGGTAGGAGGAGGGTACTAGGCTTAATACCTGGGTAAAGAAATGATCTGTATAACAAACCCACATGACACACATTTACCTGTGTAACAAACCTGCACATGTACCCTTGAACTTAAAAGTTTAAAAAAAAAAGATCTTACAAAGGCTCAAAAAACTTCTCAACTATTGATTTGCTAATTTTCTAATTGCTTTATTTGAATTAATACATTTAATCCCCAGGGATTCTTTAAAAATAAGTGTGGATTATTGTCTCTGTTTTTTGGTGAGGATACTAAGGGGAAAGGGGCAGAAGTACCTGGTTTGTAGTATACGCTGAAGAACTGGAGTCCCTCACTTGTCCATTTCCTGATATCATTTACTTGTCTCTATTTTTCATTCCAGTCACAGTTGCTACAACTAGTTTTCTGTCTAGAGATGAGGCACTGAAGTACTGTTAAGATGGCTCCACACTCATCTACACACTGACATTAAATGAACATCTATTATACATCTGTACCATAACTGACAGTTGTCTCTTAAATACACTTGATAGATGACAAGAGTGACAAGAAAAAATAATTTTACAAACCCTAAAGGTATATGTAAATGTTAGTAAATGTACTGACTTTCAAACATAATGTAAATGTATTGACGTTCAGACATAATTGTGTTGTATGTAATAAAACACAAACAATATATATATTATAAATAACATACATTACATACATAACACACACATATATAAAGAGAGAGAAGACATATCACATAATGGAAAAGTAAAAATTATTCAACTATGCATTAAAAAAACATGATATGCACAATCATTTGTTCAACACAATTCCTTCTTTGCTCTTTAGTTTTAGCAGGACACTTGGCTTTTATATGCATAGCCTATTGACTTTCTGTCCACACTTGTATAAGTAAAAGTATAGTAAATTACTGAGTTTTCTGATATTAGTCATTGTGTTTCTCAGAAGATATTGCTATATTCTGCAAAGGCTCAGCTATCAGCCTTTTGACACCCTCCTAAAGGAAGATAAACTCAAAAAGGAATTCCTGATTATATAATTTTGTCTAAGTAAAGATAGAGACTTACATTTATAAAACCTCTTTATTCCTTCCAAAGCACCTACACTTTCATTATTTTATTTGATCCTAACAATGGTGTTGTGAGAGGTATAGAAACAATTGTATTGTCCTCATTTTACCCAGGAGGAAACTGAAGCTTAAAAAATGGAAGTAACTGATGCGTGCACACAGATAAGGAGCTGTTCTGAAACTTGCATCAAAGTGTTCTGAGGGACCTGACTGTTAGACAGAAAACTAACAAACAGAAAGGAATAGCATCAACATCAACAAAAAGGGCATCCACACCAAAACCCCATCTGTAGGTCACCATCATCAAAGACAAAAGGTAGATAAAACCACAAAGATGAGGAGAAACCAGAGCAGAGAAGATGAAAATTCTAAAAACAAGAGTGCCCCTTCTTCTCCAAAGGATCACAGCTCCTCGCCAGCAATGGAACAACGCAGGACGGAGAATGATTTTTGACGAGGTGACTGAAGTAGATTTCATAAAGTCAGTAATAACAAACTTCTCTGAGCTAAAGGAGGATGTTCGAACCCAATGCAAGGAAGCTAAAAACCTTGAAAAAAGATTAGACGAATGGCTAACTAGAATAAACAGTGTAGAGAAGACCTTAAATGACCTGATGGAGCTAAAAACCATGGCATGAGAACTATGTGACACATGTACAAGCTTCAGTAGCTGATTCGATCAAGTGGAAGAAAGGGTATCAGTGATTGAAGATCAAATTAATGAAATGAAGCAAGAAGAGAAATTTAGAGAAAAAAGAGTAAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTGCGTTTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAAGCAAGCTGGAAAACACTCTTCAGGATATTATCCAGGAGAACTTCCCCAAACTAGCAAAGCAGGCCAACATTCAAATTCAGGAAATACAGAGAACATCACAAAGATACTCCTCGAGAAGAGCAACCCCAAGACACATAATTATCAGATTCACCAAGGTTGAAATGAAGGAAAAAATGCAAGGGCAGCCAGAGAGAAAGGTCAGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGAAGATCTCTCTGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGACCAATATTCAACATTCTTAAAGAAAATAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTCACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCTTACAAGAGCTTCTGAAGGAAGCACTAAGCATGGAAAGGAATAACTGGTAACAGCCACTGCAAAAACATGCCAATTGTAAAGACCATCGAGGCTAGGAAGAAACTGCATCAACTAATGAGCAAAACAACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCCCCAATTAAAAGGCACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATCCAGGAGACCCATCTCATGTGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATTTACCAAGCAAATAGAAAACAAAAAAAAGCAGGGGTTGCAACCTTAGTCTCTGATAAAACAGACTTTAAACAAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCTAAATATATATGCATCCAATACAGGAGCACCCAGATTCATAAAGCTAGTCCTGAGAGACCTAAAAAGAGACTTAGAGTCCCACAAAATAATAATGGGAGACTTTAACACCCCACTGTCAATATTATACAGGTCAACGAGACAGAAGGTTAACAAGGATATCCAGGACTTGAATTCAGCTCTGTACCAAGCAGAACTAATAGACATCTACAGAACTCTTCACCCCAAATAAACAGAATATACATTCTTCTCAGCACCACATTGCACTTATTCCAAAATCGACCACATAGTTGGTAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATCACAACAAACTGTCTCTCAGACCACAGTGCAATCAAATTGAAGTGAGGATTAAGAAAGTCACTCAAAACCACACAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTAAATAACAAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAATGAGAACAAAGACACAACGTACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATCCCCACAACAGAAAGCAGGAAAGATCTAAAATCCACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAAAGCAAATAAATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAGATGAGAGCAGAACTGAAGGAGATACAAAAAAACCTTTCAAAAAATCAATGACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAATCGTTGTGGAAGTCAGTGTGGCGATTTCTTAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATACACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGAGACCAACTCAAATGTCCATCAATGATAGACTGGATTAAGAAAATGTGGCACATATACGCCATGGAATACTATGCAGCCACAAAAAAGGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAGAAAACCAAACACTGCATGTTCTCACTCATACTTGGGAACTGAACAATGAGAACACTTGGATACAGGATGGGGAACATCACATACCAGGGCCTGTCATGAGGTTGGGGGATGGGGGAGGGATAGCATTAGGAGATATACCTAATGTAAATGATGAGTTAATGGGTGCAGCAAACCAACATGGCACATGTATACATCTATAACAAACCTGCACGTTGTGCACATGTACCCCAGAACTTAAAGTATAATAAAAAAGAAAAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACAAAATTGATGGACTGCTAATAAGACTGCTAACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGAGGATATCACCACTGATCCCACAGACATACAAGCTACCATCAGAGAATACCATAAACACCTGTATGCAAAGATACTGGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGGCTAAACCAGGAAGAAGTTGAATCACTGAAAAGACCAATAACAGGCTCTGAAATTGAGGCAATAATTAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGACGGATTCACAGCCAAATTCTACCAGAGGTAAAAAGAGGAGCTGGTACCATTCCTTCTGAAATTATTCCAAGCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACAACAAAGAAAGATAGTCTTAGACCAATATCCCTCATGAACATCAATGCAAAAATCCTCAATGAATTACTGGTAAACTGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTTGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATATGCTAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAGACAAAAAGCACATGATTATCTCAATAGATGCACAAAAGGCCTTAGAAAAAATTCAACACCACTTCATGCTAAATACTTGCAATAAACTAGGTATTGATGGAATGTATCTCAAAACAATAAGAGCTATTGATGACAAACCCACAGCCAGCATCATACTGAATGTGCAAAACCTGGAAGCATTCCCTTTGAAAACTGGCACAAAACAGGGAGGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCGGGGCAATCAGGCAGGAGAAGGAAATAAACGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGGTATGTTTGTATATCTAGAAAACCACATCATCTCAGCCCCAAATCTCCTTAAGCTGATAGGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAGAGAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAGGAGAATAAAATACCTAGGAATACAACTTACAAGGGATGTGAAGGACCTGTTCAAGGAGAACTACAAACCACTGCTCAACAAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGATAGGAAGAATCAATATCTTGAAAATGGCCATACTACCAAATGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGTATTGGAAAAAACTACTTTGAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGCACCAAAACAGAGATATAGACCAATGGAACACAACAGAGCCCTCAGAAATAACACCACACATCTACAGCTATCTGATCTTTGAGAAACATGACAAAAACAAGCAATGGGGAAATGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATGAAAGACTTAAATGTTAGACCTAAAACCATAAAAACTCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAAAGAGATCTAATTAAACAAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCAACCCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTTAAACAAATTTACAAGAAAAAAATCAAACAACCCCATCAAAAGTGGGCAAAGGATATGAGCAGGCACTTCTCAAAAGAAGACATTTATGCAGCCAAAAGATGCATGAAAAAATGCTCATCATCACTGGTCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGTAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTTGTGGGACTGTAAACGAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAAGACCTAGAACTAGTAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATTCTACTCTGAAGACATATGCACACATAAGTTTATTGCATCACCATTCACAACAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGTTAGACTGGATTAGGAAAATGTGGCACATATACACCATGGAATACTATGCAGCTATAAAAAGGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTTTGAGCAAACTATTGCAAGGACACAAAACCAAACACCACATGTTCTCACTCATAGGTGGGAATTGAACAGTGAGAACACTTGGACACAGGGCAGGGAACATCACACACCAGGGCCTGTCATGGTGGGGGGATGGGGGAGGGATAGCATTAGGAGAAATACCTAATGTAAATGACGAGTTAATGGGTGCAGCAAAACAACACGGCACATGTACACATATGTAACAAACCTGCACATTGTGCACATGTACCCTAGAACTTAAAGTATAATAATAGTAATATTAATAAAAGTGTTCTGAACTAAAGCCTAGGAAAAGGCGTAAGCACAGTTTCTACTATCTTACTTCTTGAAAAAATACAGCCTGCTGATGTCCTTCAGAAA	GTAGGGGT	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2617:HG3_PB_pbsv_1791:HG2_PB_pbsv_1808:HG2_10X_allpass_261:HG3_10X_allpass_3658:HG3_PB_SVrefine2PBcRDovetail_976:HG3_Ill_SVrefine2DISCOVARDovetail_1227:HG2_PB_SVrefine2PBcRplusDovetail_5578:HG2_PB_SVrefine2PB10Xhap12_1420:HG2_PB_SVrefine2Falcon2Bionano_670:HG2_10X_SVrefine210Xhap12_1369:HG2_Ill_tnscope_182:HG3_Ill_Krunchall_2334;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1369:HG2_PB_SVrefine2Falcon2Bionano_670:HG2_PB_SVrefine2PB10Xhap12_1420:HG2_PB_SVrefine2PBcRplusDovetail_5578:HG3_Ill_SVrefine2DISCOVARDovetail_1227:HG3_PB_SVrefine2PBcRDovetail_976;NumExactMatchSVs=6;ClusterMaxShiftDist=0.000343702;ClusterMaxSizeDiff=0.000343702;ClusterMaxEditDist=0.000343702;PBcalls=6;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-40730;DistBack=-8549;DistForward=-32212;DistMin=-32212;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:34695830-34736567;PctSeqSimilarity=1;PctSizeSimilarity=0.9999;PctRecOverlap=1;SizeDiff=-5;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1889.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:71:0|1:27:0:0:35:1|0:0:33:57:0:0/1:68:21:0/1:424:238:40882:.:.
chr2	34828829	HG2_10X_SVrefine210Xhap12_1370	TGGAGGAGGTTAAAGATGAGTTTCAGAGGAGATAGCACTTAAGAAGATGCTACATTTTGGACTGAACCAAATTAAATAGGCATGTTTGGCTCACGAGTCACATAAAATAAATTCTATACTATTCAAATGAATAGAACTATATAGTATGCTATTGTGTTTATGAGTCTGAGCCGAGATAGGAGGCAGGACCGGACTCCACAGGCATGGCTTGGGTACCAGCCTAAATTGAGTACTAGCTAAAATAGGTCCTGGGCAGAAGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1370:HG4_Ill_MetaSV_2564:HG3_PB_pbsv_1793:HG4_PB_pbsv_1810:HG2_PB_pbsv_1810:HG3_PB_HySA_2708:HG2_PB_HySA_3349:HG4_PB_SVrefine2PBcRDovetail_968:HG4_PB_SVrefine2Falcon1Dovetail_1138:HG4_Ill_SVrefine2DISCOVARDovetail_1256:HG3_PB_SVrefine2PBcRDovetail_977:HG3_PB_SVrefine2Falcon1Dovetail_1123:HG3_Ill_SVrefine2DISCOVARDovetail_1228:HG3_Ill_150bpfermikitraw_2189:HG2_PB_SVrefine2PBcRplusDovetail_5579:HG2_PB_SVrefine2PB10Xhap12_1421:HG2_PB_SVrefine2Falcon2Bionano_671:HG2_PB_SVrefine2Falcon1plusDovetail_6044:HG2_Ill_SVrefine2DISCOVARplusDovetail_6467;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1370:HG4_PB_SVrefine2PBcRDovetail_968:HG4_PB_SVrefine2Falcon1Dovetail_1138:HG4_Ill_SVrefine2DISCOVARDovetail_1256:HG3_PB_SVrefine2PBcRDovetail_977:HG3_PB_SVrefine2Falcon1Dovetail_1123:HG3_Ill_SVrefine2DISCOVARDovetail_1228:HG3_Ill_150bpfermikitraw_2189:HG2_PB_SVrefine2PBcRplusDovetail_5579:HG2_PB_SVrefine2PB10Xhap12_1421:HG2_PB_SVrefine2Falcon2Bionano_671:HG2_PB_SVrefine2Falcon1plusDovetail_6044:HG2_Ill_SVrefine2DISCOVARplusDovetail_6467;NumExactMatchSVs=13;ClusterMaxShiftDist=0.015444;ClusterMaxSizeDiff=0.015444;ClusterMaxEditDist=0.0194175;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-259;DistBack=7958;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=259;REFWIDENED=2:34828830-34829347;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1890.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:1:27:1:30:./.:1:1:0:2:1/1:0:8:./.:.:.:.:.:.
chr2	35034437	HG2_Ill_scalpel_1640	CTAACTTACCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_231:HG2_PB_HySA_3353:HG2_PB_assemblyticsPBcR_12902:HG3_PB_assemblyticsfalcon_13380:HG2_PB_assemblyticsfalcon_13322:HG2_Ill_Spiral_106:HG2_PB_pbsv_1811:HG4_Ill_MetaSV_2565:HG2_Ill_tnscope_183:HG4_PB_pbsv_1811:HG4_PB_SVrefine2PBcRDovetail_969:HG4_Ill_scalpel_1586:HG4_Ill_SVrefine2DISCOVARDovetail_1257:HG4_Ill_GATKHCSBGrefine_1188:HG4_10X_allpass_296:HG3_PB_SVrefine2Falcon1Dovetail_1124:HG2_PB_SVrefine2PBcRplusDovetail_5580:HG2_PB_SVrefine2PB10Xhap12_1422:HG2_PB_SVrefine2Falcon2Bionano_672:HG2_PB_SVrefine2Falcon1plusDovetail_6045:HG2_Ill_scalpel_1640:HG2_Ill_SpiralSDKrefine_8359:HG2_Ill_GATKHCSBGrefine_1147:HG2_10X_SVrefine210Xhap12_1371;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1371:HG2_Ill_GATKHCSBGrefine_1147:HG2_Ill_SpiralSDKrefine_8359:HG2_Ill_scalpel_1640:HG2_PB_SVrefine2Falcon1plusDovetail_6045:HG2_PB_SVrefine2Falcon2Bionano_672:HG2_PB_SVrefine2PB10Xhap12_1422:HG2_PB_SVrefine2PBcRplusDovetail_5580:HG3_PB_SVrefine2Falcon1Dovetail_1124:HG4_10X_allpass_296:HG4_Ill_GATKHCSBGrefine_1188:HG4_Ill_SVrefine2DISCOVARDovetail_1257:HG4_Ill_scalpel_1586:HG4_PB_SVrefine2PBcRDovetail_969:HG4_PB_pbsv_1811;NumExactMatchSVs=15;ClusterMaxShiftDist=0.1125;ClusterMaxSizeDiff=0.1125;ClusterMaxEditDist=0.1125;PBcalls=12;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-245;DistBack=5024;DistForward=4259;DistMin=4259;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=2:35034438-35034696;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1891.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:28:0:3:29:0|1:46:0:0:18:0/1:26:27:./.:.:.:.:.:.
chr2	35678844	HG4_Ill_150bpfermikitraw_2226	TATATATTATATATAATATATATTATATATAATATATTATATATAATATATATTATATATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1373:HG3_PB_assemblyticsfalcon_13383:HG3_PB_pbsv_1794:HG4_PB_pbsv_1813:HG4_PB_HySA_2676:HG4_Ill_svaba_2171:HG4_Ill_scalpel_1590:HG4_Ill_manta_422:HG4_Ill_Krunchall_2424:HG4_Ill_GATKHC_2807:HG4_Ill_GATKHCSBGrefine_1190:HG4_Ill_250bpfermikitraw_2289:HG4_Ill_150bpfermikitraw_2226:HG4_10X_allpass_297:HG3_PB_HySA_2711:HG3_Ill_svaba_2212:HG3_Ill_manta_368:HG3_Ill_Krunchall_2344:HG3_Ill_GATKHC_2884:HG3_Ill_GATKHCSBGrefine_1154:HG3_Ill_250bpfermikitraw_2290:HG3_Ill_150bpfermikitraw_2200:HG2_Ill_svaba_2145:HG2_Ill_manta_485:HG2_Ill_SpiralSDKrefine_8364:HG2_Ill_Krunchall_2326:HG2_Ill_GATKHC_2812:HG2_Ill_GATKHCSBGrefine_1149:HG2_Ill_250bpfermikitraw_2295:HG2_Ill_150bpfermikitraw_2109:HG2_PB_pbsv_1813:HG2_PB_HySA_3356:HG4_PB_SVrefine2PBcRDovetail_970:HG4_PB_SVrefine2Falcon1Dovetail_1139:HG4_Ill_SVrefine2DISCOVARDovetail_1259:HG3_PB_SVrefine2PBcRDovetail_978:HG3_Ill_SVrefine2DISCOVARDovetail_1229:HG2_PB_SVrefine2PBcRplusDovetail_5582:HG2_PB_SVrefine2PB10Xhap12_1424:HG2_PB_SVrefine2Falcon2Bionano_674:HG2_PB_SVrefine2Falcon1plusDovetail_6046:HG2_Ill_SVrefine2DISCOVARplusDovetail_6469;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2109:HG2_Ill_250bpfermikitraw_2295:HG2_Ill_GATKHCSBGrefine_1149:HG2_Ill_GATKHC_2812:HG2_Ill_Krunchall_2326:HG2_Ill_SpiralSDKrefine_8364:HG2_Ill_manta_485:HG2_Ill_svaba_2145:HG3_Ill_150bpfermikitraw_2200:HG3_Ill_250bpfermikitraw_2290:HG3_Ill_GATKHCSBGrefine_1154:HG3_Ill_GATKHC_2884:HG3_Ill_Krunchall_2344:HG3_Ill_manta_368:HG3_Ill_svaba_2212:HG3_PB_HySA_2711:HG4_10X_allpass_297:HG4_Ill_150bpfermikitraw_2226:HG4_Ill_250bpfermikitraw_2289:HG4_Ill_GATKHCSBGrefine_1190:HG4_Ill_GATKHC_2807:HG4_Ill_Krunchall_2424:HG4_Ill_manta_422:HG4_Ill_scalpel_1590:HG4_Ill_svaba_2171;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.133333;PBcalls=14;Illcalls=26;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-60;DistBack=34937;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=69;REFWIDENED=2:35678820-35678948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1892.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:70:1/1:3:29:0:35:./.:3:11:5:19:1/1:0:41:./.:.:.:.:.:.
chr2	35772266	HG4_Ill_FB_1534	ATGTGGCAATAACCTAAATTTGGTTTGGATCAAGGTGTTATGATGGAAGTAATG	A	20	PASS	ClusterIDs=HG2_PB_HySA_3357:HG4_PB_HySA_2678:HG2_PB_assemblyticsfalcon_13328:HG4_PB_pbsv_1814:HG4_Ill_svaba_2172:HG4_Ill_scalpel_1591:HG4_Ill_manta_423:HG4_Ill_Krunchall_2426:HG4_Ill_GATKHC_2809:HG4_Ill_GATKHCSBGrefine_1191:HG4_Ill_FB_1534:HG4_Ill_Cortex_1770:HG4_Ill_250bpfermikitraw_2291:HG4_Ill_150bpfermikitraw_2228:HG4_CG_vcfBeta_1154:HG4_10X_allpass_298:HG2_PB_pbsv_1814:HG2_Ill_svaba_2146:HG2_Ill_scalpel_1644:HG2_Ill_manta_486:HG2_Ill_breakscan11_232:HG2_Ill_Krunchall_2328:HG2_Ill_GATKHC_2813:HG2_Ill_GATKHCSBGrefine_1150:HG2_Ill_Cortex_4215:HG2_Ill_250bpfermikitraw_2296:HG2_Ill_150bpfermikitraw_2110:HG2_CG_vcfBeta_1040;NumClusterSVs=28;ExactMatchIDs=HG2_CG_vcfBeta_1040:HG2_Ill_150bpfermikitraw_2110:HG2_Ill_250bpfermikitraw_2296:HG2_Ill_Cortex_4215:HG2_Ill_GATKHCSBGrefine_1150:HG2_Ill_GATKHC_2813:HG2_Ill_Krunchall_2328:HG2_Ill_breakscan11_232:HG2_Ill_manta_486:HG2_Ill_scalpel_1644:HG2_Ill_svaba_2146:HG2_PB_pbsv_1814:HG4_10X_allpass_298:HG4_CG_vcfBeta_1154:HG4_Ill_150bpfermikitraw_2228:HG4_Ill_250bpfermikitraw_2291:HG4_Ill_Cortex_1770:HG4_Ill_FB_1534:HG4_Ill_GATKHCSBGrefine_1191:HG4_Ill_GATKHC_2809:HG4_Ill_Krunchall_2426:HG4_Ill_manta_423:HG4_Ill_scalpel_1591:HG4_Ill_svaba_2172:HG4_PB_pbsv_1814;NumExactMatchSVs=25;ClusterMaxShiftDist=0.188034;ClusterMaxSizeDiff=0.188034;ClusterMaxEditDist=0.188034;PBcalls=5;Illcalls=20;TenXcalls=1;CGcalls=2;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=2;HG2count=14;HG3count=0;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-53;DistBack=5543;DistForward=34924;DistMin=5543;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:35772265-35772320;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1893.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:27:0|1:39:2:3:24:0|1:26:1:0:24:0/1:26:25:./.:.:.:.:.:.
chr2	35974078	HG4_PB_SVrefine2PBcRDovetail_971	GATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAACACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGAAATCAGGAAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAGGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTAGACACCAATAACAAACAGACAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTAAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCGTACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATAGAACCAAAAAAAGAGCCCACATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGTCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGACCAATGGAACAGGACAGAGCCCTCAGAAATAATGCTGCATATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGAAATGGGGAAAGGATTTGCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGACATATGTAGAAAGCTGAAACTGGATCCCTTCCATACACCTTATACAAAAATTAACTCAAGATGGATTAAAGACTTACATGTTAGACCTAAAATCATAAAAGCCCTAGAAGAAAACCTAGGCAATACCAGTCATGACATAGGCATGGCCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAGTCTACTCATCTGACAAAAGGCTAATATCCAGAATCTACAATGAACTCCAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTTGGCAAAGGACATGAACAGACACTTCTCAAAAGGAGACGTTTATGCAGCCAAAAAACACATGAAAAAATGCTCACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGTGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAAGGATGTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGCATTAAGAAAATGTGGCACATATATACCATGGAATACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATAGCAAGGACAAAAACCCAAACACCTCATGTTCTCACTTATAGGTGTGAATTAAACAATGAGAACACATGGACACAGGAAGGGAACATCACACACTGGGGCCTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTAGGAGATATACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACTAACCTGCACGTTGTGCACATGTACCCAAAAACTTAAAGTATAAAAAAAAAAAGAAAGTCAAGTGATAGAGCATAGCCACACACACACACAAAAATGAGCTAAATTAGAGGACTCACACTTAAAGATTTCAAAACTTACTACAAAACTACAATAATAAAAACAGTATGTACTGGCATAAGGATAAACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATTTTAACTAAAAAGGATTAAAATCCACAAAATAAACTTTTACATGTATGGTGAATCAATTTCTGAAAATGGGGCCAAGACAATTCGAAGAGAAAAAGCATAGTCTTTTCAACAAATGGTGCTGGGGCATTTGCATAGCCACATGAAGAAGGAAAAAGTTAGACCCGTTTCTCACACCAGACACAAAATCTACAAAAATTGGATCACAGACCTAAATATAAGAACTAAAATTATAAATCTCCTAGAAGAAAATATATAAATATATATGTATATAAGACCTCAATATGAGAAAATTATAAATCTCCTAGAAGGAAATATATAAATCTATATCTGTATGATTTTTGGTTACATAAAGCCTTTTTAAATACAACACCAAAAGCATAATCAACAAAAGAAAATATACAAAATTGGGTTTAAGATTCATTGTGCTTCAAATGATATGACATTAACAAAGTGAAAAACACCATGGAAATAAAAATATTTAAAAATAATATATTTGATAAAGGAAGGACTTTTATTTAGAATATGTGAAAATTATTACAACTCAATAATAAAACAATTTTTGAAAATGTGTAAAAAATGTGCATAGACATTCCTCCAGAGAAGATATACAAATGGCCAAATGCACATGACAAGATGCTCAATATCATTAGACATCAGGGAAATGCAAATTAAAATCATAATCTTACAGCAAATCAAAACCATAATCTTCCCACCCACTAGAATGGCTAGAGAATAAAAAGTGTCAGCAGATAGTAAAAAGTGTTAAAAAATTGAAACCCTTGTATAATCCTGGTGAGAAATGAAAATAGTGCAGCCACTTTGGAAAGCAGTCTGTTAATTCCTCAAATGTTATACATGGAGTTATCATATAACCCAACAATTTCACTCCTGCTATATCTCAAGATAAACGAAAATATATATTCACACAAAAATGTGTGCACAAAAGTTTGTAGCAGCACTATTTACAATACCAAAAAGTGAAAACAAACCAAATGTCCATGTACTGATAAATGAAGAAAGTATGTAATATTCATACAATAAAATATTTTTTGTTTTTTGTCTTTTTATTTTTTAAGTTTTTGTGAGTACATAGTAGATGTATATATTCATGGGGTCAAGAGATGTCTTGATACAGGCATGCAACATGAAATAAACACATCATGGAGTATGTGGTATCCATCCCTTCAACCATTTATCCTATGAGTTACAAACAATCTGATTACATTAGTTATTTTAAAATATACAATTAATTTACTATTGATTATATTCACCCTGTTGTGCTATCAAATAGAAAGTCTTATTCATTCTTTCTAATTTTTTCTACACATTTACCATCCCCACTTTCCCACTATCCCCGCCACACCCTTCCCATCCTCTGGTGACCATCCTTCTACTCTCTATGACCATGAGTTCAATTGCTCTGATTTTTAGATTCCACAAATAAGTGAGAACATGCAATGTTTGTCTTTCTGTGCCTAGATTCATTCACTTAACATAAGAATCTCTAATTCCATCTGTGTTGTTGCAAATGACTGGATCTCATACTCTTTTATGGCTGAATACTACTCTCCATTGTGTATGTGCTACCACATTTTCTTTATCCATTTATCTGTTGATGGACATTTAGGTTGCTTACAAATCTTAGCCATTGTGAACAGTGCTGCAACAAACACAGAAGTGCAGATAACTCTTTGACATACTGATTTCCTTTTGGGGGGTATATACCCAGCAACAGGATTGCTGAATTGTATGGTAGCTCTGTTTTTAGTTTTTTGAGAAACGTCCTAACTGTTCTCCATACTGATTGTATTAATTTGCATTCCTGGCAGGGTGCAGTGGCTCACGCCTGTAATCCCAACACTTTGGAAGGCCAAGGGAGGCAAATCACTTGAGCCCAGGAGTTCAAGATCAGTCTGAGCAACATGGTGAGACCCTACCCCTACAAAAAATAAAAAATAAAGTGTAGTTTACGTTCCTACCAACAGTATACAAGGGTTGACTTTTCTTCACATTCTCGTCAGCATTTGCTGTTGCCAGTCTTTTGGATATCAGCCATTTTAACTGGGGTGAGATGATATCTCATTGTAGTTTTGATTTGCATGTCTCTGATGATCAGAAATGTTGGGCACCTTTTCCTATGCCTGTTTGCCATTTGTATGTATTCTTTTATGAAATGTCTGTTCAAATCTCTCACCCATCTTTTGATCAGATCATTAGATTTTTTTTGCCATAAAATTGTTTGAACTCTTTATGTATTTTGGTTATTAATTCCTTGTCAGAAGGGTAGTTTTTGAATATTTTCTCCCATTCTGTGGGCTGTCTCTTCCCTTTGTTGGTTGTATCCTTTATTGTGCAGAAACTTTTTAACTTATGTTATCTCATTTGTGTCCATTTTTGTTTTGGTTGCCTGCACTTATGAGGTATTGCTCAAGAAATTTTTGCCCAGACCAATGACCTGGTTGTTTTTCCCAGTGTTTTCTTGTGATGGTTTCATGGTTTGACATCTTAAATTTAAATCCACTTTGACTTTATTTTTGTATATGGAGAGAGATAGGAGTCTAGTTTCATTCTTTTGCACATGGATATCCAGTTTTCCTAGCACCATTTATTGAAGAGACTGTCTTTTCCCCAGTGTAGATTCTTGGCACCTTTGTCAAAAGTAAGTTTACTATAGGTGGGTGGATTTGTTTCTGGGTTCTCTATCTGTTCCATTGGTCTATGTGTCTGTTTTAATGCCAGTACCAGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCTGAGGTGGGCAGATCATCTGAGGTCAGGAGTTTGAGACCAGCCTGGACAACATGGTGAAACCCCGTCTCTACTAAAAACACAGAAATTAGCCGGGCGTGGTGATGCGTGCCTGTAGTCTTAGCTACTAGGGAGGCTGAGACAGGATGATTGCTTGAACTCAGAGGTTGCAATGAGCCGAGATTGCACCACTGCACTCTAGCCTGGGCAACAGAGTGAGACCCTGTCTCAAATAATAATAATAATGCCAGTACCATTCTGTTTTAGTTACTGTAGCTGGGTAGTATAATTTGAAATCAGGTAATGTGATTCCTCCAGTTTTGTTCTTTCTGCTTAGGATAGCTTTGGGTGTTCTGAGTCTTTTGCAGTTCCACATAAATTCTAGGGCTGTTTTTTTGTTTGTTTGTTTGTTTTCTATTTCTGTGAAAAATGTTATTGATACTTTATAGGGACTGCATTGAATATGTAGATTGCTTTGGGTAGTATGGATATTTTAACACTACTGATTCTTCCAATCCATGAACATGAAGTATCTTTTCATTTTTTATTGTCTTCAATTTCTTTTATTAGTGTGCTATAGTTTTAATTATAGAAATCTTTCACTTCTTTGGTTAATTCCTAGGAATTTAATTTTATGTGTGGCAATTGTAAATGAGACTACTTTTTTATTTCTTTTTCACATTGTTCACTGTTGGCATATAGAAACGCTACTGATTTTTATATGTTGGTTTTGTATCCTGCAACTTTACTAAATCTGTTTATCAGTTCTAATAGCGTTCTTGTGGAGCCTTTGGATTTTTCCAAATATAAGATCATATCATCAGTAAACAAGAATAATTTGACTTATTTTCCAATTTGAATGTTCTTTATATCTTTCTTCTATCTGATTGCTCTAGATAGGACTTCCAATACTATGTTGGATAACAGTGGTAACAGTGGGCATCCTTGTCATGTTCCAGATCTTAGAAGAAATAGTTTCAATTTTTTTCCTTATTCAATATGCTATTAGCCGTGGGTCTGTCATACATGGCTTTTATTACATTCGGATATGTTCCTTCTATCCCGTTTTTTGAGGATTTTTATCATGAAGTGACATTGAATTTTATCAAATTCTTTTTAGCATCAATTTAAATAATCATATGGTTTTTATTCTTTATTCTGAAGATATGATGTAGCACCTTGATTTGTGTGTGTTGAACCATCCTTGCATCCCAGGGATAAATACCACTTTGTCCTGATGAATGATCTTTCTAATATATTGCTAAACTCAATTTACTAATATTTCGTTATTTTGTTGAGGATTTTGGCATAAATATTCATCAGAGATATTGGCCTGTAGTTTTCTTTCTTTTTTTTTTTTTTTTTTGGATGTATCTCTGTCTTGTTTTGATATCAGGGTAATACTGGCCTCATAGAATGAGTCTGGAAGTATCTTCTCTTCTATTTTTTGGAATAGTTTGATTTGGATTGGTATTAGTTCTTTAAATGCTTGGTAGAATTCAGCAGTGAAGCCATCAGCTACCTGGATTTTCTTTACTGGAAGACTTTTTATTAGGGCTTCAATCTCATTACTCATTATTTATCTGTTCAGGCTTTAGAATTCTTCCTGGATCAATCTTTGTAGGTTGTGTGTGTCTAAGAATTTATCAAGGAATTTGTCCAGTTCTTCTAGATTTTCCAATATATTGGCATACAGCTACTCATAGTAGCCACTAATGATTCTTTGAATTTCTGCAGTATCAGTTGTAATGTCTCCTGTTTCATTCGTGATTATCTTTTTTTTATCTTCTCTCTTTTTTTCTTGGTTACTCTGTCTAAACATTTGTCAATTTTGTTTAATTTTCCAAAAATCAACTTTTAGTTTCATTGATCTATTGTGTTGTTTATTTCAATTTCCTTTATTTCTGCTCTGATCTTTATTATTTTTTTTCTTCTACTAATTTTGGGTTTAGTTTGCTCTTGCTTTTCTAGATGCATCATTAGATGGTTTATTTGAAGATTTTCCTCTGTTCAGATGCATGCACTTTTAGCTATTAACTTTCCTCTTAGTAGCTTTAGCTGTAACCCATAGGTTTTGGTATGTTGTGTTTCCATTATCATTTCTTTCAAAACATTTTTCCATTTCCTTCTTAATTTCTTCATTGACTCACTAGTCTTTCAGGAACATATTGTTTAATTTTCATGTATTTATGTAGTTTTTAAAATTCCTTAATTCCTTAATTAAATTATTTTCAGTTTTATTCCATTGTTTTCAGAGAAGATGCTCAATATTATTTCAATATTTTTGAATGTTTTAAGGCTTGCTTTGTGACCTTACATATGGTATATCTTTGAGAATGATCCATGTGCTAAGGAAGAAAATGGGTATTCTGCAGTTCTTGGATGAAATGTTCTGTAAATGTCTATTAGATCCCTTTGGTCTATAGTGCAGATCGAGTCTGATGTTTCTTTGTTGATTTTCTGCCTGGAAGATCTATCCAATGCTGAAAGTTGGGAGCTGAAGTCTCCAGCTTTTATTGTATTGTTATTATGCTTCTCTTTAGCTCTAATAATTTTCTATTATATATCTGTGTGCTTTAGTGTCGGGTACATATATATTTAAAATCGTTATATCCTCTTGCTGAATTCACTGGTTTATCATCATGTAGTGACCATCTTTGTCTTTTCTTACAGTTTTTGTCTCAAAAACTAGGCATTTAATTTTATGTGTGGCAATCTTATGCAAGTATAATGATGCCTGCTCTTGTTTTCCATTGGCATGGAATATCTTTTACCATCCCTTTATTTTCAATCTATATGTGTCTTTATAGGTGAAGTATGTTTCTTCTAGGCAACAGACCAATCGGTCTTGTTTTTTTTAATCCATTAAGCCAGTCTATGTCTTTTGATTGGAGAATTTATGCCATTTGCATTCAATGTTATTATTGATAAGTAAGAACTTACTCCTGCCATTTTGTTATTTGTTTTCTGGTTGTTTTGTGGTCTTCTCTTCCTTCTTCCATTCCTGTCCTCTAGTGAAGATGATTTTCTCTGGTGGCATGATTTAGTTTCTGGATTTTTATTTTTTGTTTATCCATTGTATGTTTTTTGGTTTGAGGTTACCATGAAGCTTGCAAATAATATCTTATAAACTAGTATTTTAACCTAACAATTTAACAGTATTTTGATAAACAAGCAAGCAAAAAAGGAAAACTAATAAAACCTCACTTTAACTTAATCTCCTCACTTTTTAAATTTTCGTTGTTTCTATTTATATCTTATTGTATGGCCTATAACTTGAAAAGTTGTTGTGGTTATTATTTTTTATTGGTTCATCATTTAGTCTTTCTACTTAGGATAAAGTTACTTTACACACCACAGTTACAGTGTTGTAATATTCTGTTTTTCTGTGTAACTACTATTGCCAGTAAGTTTTTTACCCTCAGGTGGTTATTTATTGCTCATTTGTGTCCTTTTCTTTCTGGTTGAAGTACTCTCTTTACCATTTCTTGTAGGATGGCCCTGGCATTGATGAAATCCATCAGCTTTTGTTTGTCTGAGAAAATCTTTAATTTGCCTTCATGTTTAAAGGATATTTTCACCAGATATACTATTTTAGGGTAAAAGTTTTTCTCCCCCTCAGTTCTTTAAATATATCTTGCCATTTTTTCCTGGTCTATAAGGTTTCCACTGAAAAGCCTGCTGCCAGATGTGTTGAAGCTCCATTGATGTTATTCGTTTCTTTCTCTTGCTGCGTTTAGGATCTTTTCTTTATCCTTGACCTTTGGGAGTTTGACCATTAAATTCCTTGAGGTAGTCTTCTCTGTGTTAAATCTGCTTGGTGTTCTATAACCTTCTTATACGCGAATATTGATATCTTTTTCTGGGTTTGGGAAGTTTTCCATAATTATCCAATTGAATAAACTTTCTACACCTATCTCTATCTCTACCTCCTCTTAAATAACAGCAATAACTCTTAGATTTAGCCTTCTGAGGCTATTTTCTAGGTCCTGTAGGTGTATTTCATTGTTTTCTATTCTTTTGTTTGTTTTGTCTCCTTTAACTGTATTTTTAAATAACCTGTCTTTAAGCTCACTAATTCTTTCTTCTGCTTGATTTATTCTGCTATTAAAGGACTCTGTTGTATTCTTCAGTATGCTAATTGCATTTTTCACCTTGAGAATTTCTGCTTCTTTTTAATTATTTCTATGTCTCAGTTAAATTTCTCTGATAGAATTCTGAGTTCCTTTTCTGTGGTATCTTGAATTTCCTTGATTTTCCTCAACACAGCTATTTTGAATTCTCTGTCTGGAAGGTCACATAAATCTGTTTCTCCAAACTTATAGTGCTTTATTTAGTTCATTTGGAGTAGTCATGTTTCCCTGGATGGTACTGATGCTAGTAGATAGACTTCAATGTCTTGGCATTGAAGAGTTAGTATTTATTATATTCTTCACAGTCTGGGCTTATTTGTAGCTGTTCTTCCTGAGATGGCTTTCCAGTTACTTAAAAAAGTTTGGGTGTTGTAATCTAAGCTATATCTGCCTTAGGGTGCACCCCCAAGCCTAGTAATGCTGTGATTCTTGCAGTCTCACAGAGGTACTGCTTAGATGGTCTTGGACATGATCAGGGAGAATTCTCTGGATTACCAGGCAGAGACTCTTGTTCTTTCCCTTACTTTCTTCTAAACATACAGAGTCTCGGTCTCTCTTCCAAGTCACCTAAAGCTGAGGGTGTAGTAACATAGGCACCCCTGTGGTCATCACCACTATGACTGTACTGGGTGAGACCTGAAGCCAGCACAGCACTGGGTCTCACCCAAGACCAGCTGTAACCACTCCCTGGCTACTGTCTAGGTTCACTCAAAACCCTGGGGCTCTACAATCAGAAGGTGGCAAAGCCAGCCAGGCCTGTGTCCTTCTTTTTAGAGTGGTGAGGTTCTGCAGGCCCTGGGTGGGTCTAGAAGTTGTCCAGGAGTCAGGGACTAGAGTCAAAAATGTTAGAGGTATACCTGGTATTCTATTGTATTGTGGGCCTGGAACATGGGCCTCTTGACTGTGACTGCGGCCCTATCCTGCTGTGGCTGAGCTGCTATCCAAGATGCAAGACAAAGTCCTTCCCCTCTTCCTTCTCCTCTCCTCAAGTGACAGGAAGGGGTCCCTTTTGGAGTCATCAACTGTGCAGCATGCGGTTAGGAGAGAGGTGATGCCAGCACTCCCTTGGTTGCTCTAGCTGGTGTCTCAGTAGGTCGCATGCACCCCCAGTCCACTGTCTTTTGGCCTAGTTCAGCCCTAGGGCTTGACCACAACTTGCAGTCTTTATGGTCTAGACTGCCTTTCAAGTTTACTTAGAGACCAACAGTACATTATCCCTAGGTGGTGAGGTTTGGAGGCACTCAAGTTCAAGTTCAGACCACTAGGATCGGTGATTCCCCTCTCACTAGGGCTCATTTAAATGCTCCCTCTGTGGGGAGGCATCAGCTGAGTTGGTCCCATTTTCTTTATGTTCTCACAGGACAGCACTGAGCTTACTGCCTCACAATTGCTGTATTCTACCTCCCCTAATGCCCAGAGATGCTCTCTGCATCATGCTGCTGCCAGGGGTTGGGGAGGGCTAGTGTTGAGGATTCAGGACTATTTTTTCTATCCCTTCAGTGCCTCTTTCAGTGATATGAGGTTGAAACCAGGTACTGTGAATGCTCACCTGAATTCTGGTTCTTATGAAAGTGGTTTTTTTCTGTGTAGATTGTTGTTAACGAAGTGTCCTTGCAGGCAGTATGATCAGTGGAGCTTTCTATTCTGCCATCTTGCTCTGCCTTTCCCTGTGAAATATTTGAAAATAAAAAACAAACACTGATACTAGCATACCTTGTTTTATTTTGTTTCACTTGGTTACACTTTACAGATATTATAATTTTTTTGAAATTAAGGGTTTGTGGCAACCTTGCATTGTACAACTCTATCTATTGGTGCAGTGTTTCCAACAACATGTGCTCACTTCATGTCTGTGTTTTACATTTTGGTAATTCTCACAATATTTCATATATTTTCATTATTATTATATCTATTATGGTTATCTTGATCAGTGATCTTTGATATTAGTGTTGTAATTGTTTCTTTACCAATTACATGTAATCGATAAAGAGTGTGTGTATTTTGAAAGATCAACCAATTGGCCATTCTTCCATCGCCTCCCCTCACCTTGGGCTTCCCTATTTCCTCAGACACAAGGATATTGAAATTAAGCAAATTAATGACCTTGTAGTGTCTTCTACATGCTTACATAAAGAGTTACACGTGTCTCACTTTAAATCAAAAGCTAGAAATGATTATGCTTAGTGAAGAAGGCATGTCCAAAGATGAGACAGGCCAAAAGCTAGGCCTCTTGTGCCAGACAGTTAGCCAAGTTGTAAATGCAAAGGAAGAGTTCTTGAAAGAAATTAAAATTGCTACTCCAGTGAACAGATGAATAAAAAGAAAGCAAAACAGATTAATTGCTGATATACAGAAGGTTTTAATGGTCTAGATAGAAGATCAAACCAACCATAACATTCCCTTAAGCCAAAGCCTAATCTAGAAGAAGGCACTAACTCTGTTTCATTTTGTGAAGGCTGAGAGAGTGATGAAGCTGAAGAGGAAAAGTTAGAAGCTAGCAGAGGTTGGTTTGCGAGGTTTATGAAATGAAGCCACCTTCATAACATAAAAGTACAAGGTGAAACAGCAAGTGTTAAGGTAGAAGCTGCCGCAAGTCATTCAGAAGATCTAGCCAAGGTCACTGACAAATGTGGTTACACTTAACAGATTTTCTATGTAGATAAAATAGCCTTATGTTGGAAGATGATGCCATCAAAAACTTTCTTAGCTAGAGAAGATAAAAGTCAATGCCTGGCCTCAGAGTTTCAAAGGAAAGGCTGACTCTCTTGTTAAGGGCTAATGTGGCTGATCTGGTAACTTGTGAAGGTAAAGCCAATGCTCAGTTACCATTCCATAAATCCTAGAGCCCTTAATAATTACGCTAAATCTACCCTGTCTGTGCTCTATAAGTAGAATAAAGCCTGGATGACAGCATGATTTACTGGATATTTCAAGCTCATTTTTGTCATTACTGCTCAAAATATATATATATTTCTTTTAAAATATTATTGCTCATTGACAATCCACCTGGTCACCAAAAGCTCTGATGGGAAGGTACAGGGATATTAATGTTATTATATTTTCATCCCTGCTAACACAACATCCATTCTGCATCACATGCATCACGGAGTAATTTTGATTTTCAAGTCTCATTGTTTTAGAAATACATTTTATAGAGGGATAGCTGCCATGGATAGTGATTCCTCTGATGCATCTGGACAAAGTCAATTGAAAACCTTTGAAAAGGATTCACCATTTTAGATTCCATTAAGAACATTTGTGATTCCTTCAAGAAAGTAAAAATATCCACATTAACAGGAGTTTGGAAGAAGTTGATTCCAACCCTCATGGATAACTTGGAGGGATTCAAGACTTCAGTGAAAGAAATAACTACAGATGTTTTGGAAGTAGCAAGAGAGTTAGAATTAGATGCTAAGCCTGAATATATGATGGAATTGCTGTAATATCATAATAAAACTTGAATGAATAAGGAGTTGCTTCTTATGGATGAACAAAGAAAGTGCTTTCTTGAGATGGAGTCTACCTCTGGTAAAGATGCTTTGAACATTGTTGATAATAAGGAATAAAGAATATTACATAAATGTAGATGATAAAGGAGCAACAGAGGTTGAGAGGATTAACTCCAATTTTGAAAGAAGTTCTACTATAGGTAAAATGCTACCAAACAGTATTGCATGCTACAGAGAAGTCTTCCATGAAAGCAAGAATCAATCAATATGGCAAACTTTATTGTTGTCTTATTTAAAGAAACTGCCACAGCCACCCCAATCTTTATCAGCCATCACTCTGGTCAGTCAGAAGCCATGAACATCAAGGGAAGACCCTCCGCCAGCAAAAAGATGACAACTCTCTGAAGGCTCTGATGATCATTACCATTTTTAACAAGGAAGTATTAAGTAAGGTATGTACATTTTTACATAATTTTGTTGCACTCTTAGTAGACTACATTATAATATAAACACAACTTTTAAATGCACTGGGAAACCAAAAGTTTATGTGACTTGCTCTATTGTGATATTCACTTTATTGTGGATGTCTGGAACTGAACCTGCAACATCTCTAAGGTATGCCTGTATATTCTATGACATGGATGATTCTCAGAAACGTTAAGTGTTAAAAGACAGTCATAAAATATCACATAATGTATGGTTTCAATCTTATGAAATGTCCAGGATAGCCGAACATATAGAAAGAGAAAAGTAGATTAATGGTTACCCTGGACTGCAATACAGGAGTTATTGCTAAGACACAGGGAGCCACTGCTAAAAGGTTTTCTTCTGGGATGTTGAAACACTAAAATTTATTGTGGTAATGATCCTACAACTTTGTGAATACACTAAGAATGCTTAAAATGTACATATTAAGTGCATGCATAGGCTTTTTTGATATATAAAGTATATATCGATAAAGTTGTTAATAAGAAAAAATGTGCAACCACAGTATGTATGTGTATATATATTTCTCTGGGTGCAATGGATATGGAAGAACACACGTTTAACTAAGGGTTTTACCAGGTCATAAGTAATTATATGAGATCCACTCTTTAATTACAGCAATTATTAAACACATTATAACTCCTAGACAGACTAGTATAACACCTCACCCTAATGTACTTTTACCTCAGTTCCTAGTACCTGATACATCATGTATGGCTTTCAACCAAAAATTATAAGGCATGTTAAAAGGCAAAGGAAGAAAACACACACAAAAAAATCAGTCTGAAATGAAAAAGCAAGCATCACAACCAGACTAGATATGGCAATATTTTGGAATTATCAGATGGAATTTAAAATTATTCTAACTCATATATTAAGGGCTCTAAAGGAACAAGAAAATAACATGCAAAAACAGATAAGAAATATAAATACAGAAATGGACACCCTAGTAAAGTATCAAATAAAATGTTTGTGTTTAATGGGCTCATCAGTAGACTAGACACAACTGAGAAATTTATCAACTGACACTTCCCAAACTAAAATACAAAGAGAAAAAAAAGAACAAATAAGGAGAACAGAACATTCAAGAACTGTGGGACAACTTCAGAGGTATAACACAGTTATAAATGGAATACCAGAAGAAGAAAAAGAACAGAAGAAATGCATAAAGTGATAATGACCAATTATTTCCAAACCACAGATCTAAGCCAAGAATAAATGCAAAAAAAAAAGTTTCATCTGAGTATATCCTATGCAAACTGCAGAAAACTGACGACAAAGAAAAAAAATCTTAAGCACCCAGGAGATGAGGGACACACATTGCCTGTGAAGAAACAAGGACATTAATTACAGTGGACTTCTTGTAAGAAATCATAAATTCAAGAGAGTTGAGTGAAATAGTTAAAGAGGTGAAAAAAAAAATAGCACCAACCTAGAATTCTCCATCCAGTGAAATTTTTCTTCAAAATTGTAGACAACAAAGATGTTCTCAAACAAAAACTGAAGAAATTTATTGCCCACAGACTTACTCCACATGAACTGTTAAAGGAAGGTTTTCAGGCACAGACAAATTATATCAGACTGAATCTTGGATCTACACAAAGAAATAAAGAGGATAGAAAATTGACAAAATGAAAGAATTTTTTGTAGTTGCATTAAAAGATAACTGTCTTAAAGTACAAAGAGTAGCTATATACTGTTTTTAACATATAAAAACTAAAAGGTTTAACATGATAGCACAGAGGACGAAGGAAGAAAATGGAAATAAAATGTAGGTCATTCAACTACACATAAACCAATATGATAATATTTCACAACAGACTGATTACATTTATATAGATAAATGATAGATAAATAAATAGATAGATAGATAGACATAGATATGGAACAACTAGAAAAGAGCTAGCAAAGTGGTAACATTTAATTGTATTAGTAGTTATATTTAGTGTGAATGCTCTAAATAGGCCAATTGTAAAATACCGATTATCTGAAAGAATACAAAAGTAAGACTCCACTATATGTTTTTTTCCAAGATACTCACTTTAATATCAAATAGATTAAAAGTAAAAGAATGGAGAAAGATAATGCCATGCAAACAGTGAACAAAAGAAGGTTAAGAATATTAATGTTAGATAATGTAAAGTAGACTTTATAATAAGGCATATTATCAGGGCTAATTAAGGATATTACAAGATTGTAAAAGTGAATTCTGTAAGAAGACATAACAATTCTTGATGTGTATACTCAATACAATATATCTTAAAAATAATTGAGGGAGGAAATGACAGAACTAAAAGGAGAAACAAGTAAATCTGTAATTACAGTTGGATAGTTCAACACTTCACTCTAAGTAATTGATAGAAAAAGTAGACAGAGAATCAGTATGAATATAGAAGACCTCAGTAACCCTATCAACCAATAAACCTACTTTAACGTTATAGAACACACTACCCAACAACAGAAAAATATACATTTTTTCAAATGTGCGTGCAACATACACTAAGGCCATATTTTGAGCCAGTAAACAAGCCTTAACAAATTTAAAAGAATACCAATCCTACAAGGCATATCTGTCTATAATTATAATAAAGTAGAAATTAATAACAGCTTGGATACCTCAAATTAAATAATAAATTAAATAATACATTTGTAAATAACTCATGGGTCAAAGGAGAAGTCAAAATAAATTAAAATATTTTGAGCTTAATAAAAATTTAAATACAGCATATCAAAATGTGTAATATATGGTTAAAGTAGTACTTAGATGGAAATTTATAACTTTAAGTGTTTATATTAGAGAAGACAAGTCTTAAATCAATAACCTAAGCTTCTCCCTTTAAAAAAAGCATACAAGGAAAAGAGAAGCAAATTAATACATGATTTTACGGCATATAATTCACAGTTTATATTTAACAGATTGCAGAATTCAAGGTCAATATACAAAAGTTGATAATATACCTATATATCACCATAAAAAATAGGAATTTAAATTTTAAAAAAATTTATAATAGTATTTAAAAATGAAATAGATATATAGCTAATGAAAGGAGTGTCTATATAATAAACACTACACACCATTAATGAAAGAAATCAATTTAGATATAAATAAAGGAAGAGTTATACTGTCTTTAAAGATAAAAAGACAATATTTTTAAGGTCCTAGTTCTCCATAATTGGCTCTATAGATTTAACACCAATCTTAACAAAAAAGCCAGGAATCTGTTTTTTACATATCAACAAACTGGTTCTAAAATTTCTGGGTATAGGTAAACTAATTAGAATATATTTTAATATAAAATATTATATTTATAATGGATTTCAAATTAGATAACCTAATCATTTATTGTACATATTTAAAGACAGTAGAGTTCAGCTGACCCTGAATGTTGAGCTACATATGTTCATGTACTTGTATATGTTTTTGTATTTATAAATGTATAATTTTGCCAAGTTCTAATTCTTGAAAACACTAATTTTCCCAAGTGCAGAAATTTCAGCTATGAATTTCAAATGTGAGATTTGGTGTAATACAAAAGGTCAGATGCCATAAAATCAGCATTTTTTTTACATTCAAAAATTTCAAACACAATTTTCTAGGCTCAGTAAACACGAAACTAGAGAGGCCGACTGTGCCTCAAACTTCTGTTTGAGATTTGTTGTTTATTTATATGTTTATTCATTTTAATGACATACGGTGGGCCTCAATGCAGGTTATACATCTGCAGGTTCAATCAACCAAGAATTGAAAATGTTAGAAGAAGAAGAAAGAGGAGGAAGAGGTGGAGGAGGAGGCAGAAGAGGAGGAGGCAGTGGCAAAAGAAAGAGGTAACAACTCAATAAAAAATAACACAAATACAAATATAGTATAATAACTCTTACATGGTATTAGATATTATAAGTAATCTAGAAATGATTTAAAGTAAACAGGACATTGTGCATAGGTTAGATGCAACTTCTGTGTCATTTTGTGTAACAGACTTGAGCATCCACAGACTTTGGTATGGTGGGTTGGGGATTGCGGGTTGGATTCTGGAACCAATCCCCCATGGATAAGTGAGAAGAGACTGTATTAAGTTGTGTCCTAGGAGATGCCTGGAATATTCTTTCTTCATCATATTCCTGGAGTTCCTCTGAGCTCTTAAAGAATTGCCATAACTGGAAGTCTTTTTTGAACTATATTTGTAGTTCAATTGGGATTACTCAATCAGCAAGCTCAAAATAACAAAGGTAGCTTAAAATGGGAGTTTACTGTCTCAGACAATATAAATTTCAAAGGAGGGGGTGGAACCAAGATGGCTGAATAGGAACAGCTCCAGTCTACAGCTCCAGCTCCCAGCGTGAGAGATGCAGAAGACGAATGATTTCTGCATTTCCAACTGAGATACCGGGTGCATCTCACTGGGGATTGTCAGACAGTGGGTGCAGGACAGTGGGTGCAGTGCACCGAGCCTGAGCCAAAGCAGGGCAAGGCATTGCCTCACCTGGAAAGCACAAGGGGATGGGGAATTCCCTTTCCTAGCCAAGGAAAGGGGTGACGGACGGCACCTGGAAAATCGGGTCACTCCCATCCTAATATTGTGCTTTTCCAACAGTCTTAGCAAATGGCACACCAGGAGATTATATCCCGTGCCTGGCTCGGAGGGTCCTACACCCACGGAGCCTCGCTCATTGCTAGCACAGCAGTCTGAGATCGAACTGCAAGGGGGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGACCAGGCTTGAGTAGGTAAACAAAGCAGACCAGAAGCTCGAACTGGGTGGAGCCCACCGCAGCTCAAGGAGGCCTGCCTGCCTCTGTAGACTCCACCTCTGGGGGCAGGGCATAGCCAAACCAAAGGCAGCAGAAACCTCTGCAGACATAAATGCCCCTGTCTGACAGCTTTGAAGAGAGTAGCGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAATGAACAGACTACATCCGCAAGTGGGTCCCTGACCCCTGAGTACCCTAACTAGGAGGCACCCCCCAGTAGGGGCAGACTGACACCTCACACGGCTGGGTACTCCTCTGAGACAAAACTTCCAGAGGAACAATCAGGCAGCAACATTTGCTGTTCACCAATATCCGCTGTTCTGAAGCCTCTGCTGCTGATACCCAGGCAAAGAGGGTCTGGACTGGACCTCCGGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGACTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAACCCCATCTGTATGTCACCATCATCAAAGACCAAAGGTAGATAAAACCACAAACATGGGGAAAAGACTGAGCAGAAAAACTGAAAAATCTAAAAATCAGAGCGCCTCTCCCCCTCCAAAGGAATGCAGCTCCTCACCAGCAATGGAACAAAGCTGGATGGAGAATGAATTTGACGAGTTGAGAGAAGAAGGTTTCAGATGATCAAACTACTCTGAGCTAAAGAAGGAAGTTTGAACCCATGGCAAAGAAGTTAAAAACCTCAAAAACAGATTAGACGACTGGTTAACTAGGATAACCAACGCAGAGAAGTCCTTAAAGGACCTGATGGAGCTGAAAACCATGGCATGAGAACTACGTGACAAATGAACAAGCCTCAGTAGCCGATTTCATCAACTGGAAGAAAGGGTATAAGTGATGGAAGATCAAATGAAAGAAAAGAAGCATGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATCGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGTAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGGAGGCCAACATTCAAATACAGACAAGCAAATACTGAGAGATTTTGTCACCACCAAACCTGCCTTACAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCAGTATGAGCCACTGCAAAAACATGCCAAATAGTAAAGACCATCGAGGCTAGGAAGAAACTGCATCAACTAATGAGCAAAATAACCAGCTAACATCATAATGACAGGATCAAATTCAAATATAACCATATTAACCTTAAATGTAAATGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCAACAGTGTGCTCTATTCAGGAAACCCATCTCACGTGCAGCGACACACATAGGCCCAAAATAAAGGGATGGGAGGAAGATCTACCAAGCAAATGGAAAAAAAAAAGCAGGGGTTGCAATCCTAGTCTCTGATAAAATAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGACGGCCATTACAGAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTTAGAGACCTACAAAGAGACTTAGACTACCACACAACAATAATGAGAGACTATAACACCCCACTGTCAACATTAGACAGATCAACAAGACAGAAATTTAACAAGGATATCCAGGAATTGAACTCAGCTCTGCACCAAGGGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCATCAAATGCAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAGTGCAATCAAACTAGAACCCAGGATTAAAAAACTCACTAAAAATCGCTCAACTACATGGTAACTGAACAAACTGCTCCTGAATGACTACTGGGTACATAGCGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTACAGGGAAATTTATAGCACTAAATGCCCACAAGTGAAAGCAGGAAAGATCAAATATTGACATCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGAAATCACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAAATAGAAACACAAAAGACCCTTCAAAAAATCAGTGAATCCAGGATCTGGTTTTTTGAAGAGATCAACAAAATTGATAGACCACTAGCAATACTAATGAAGAAAAGAGAGAAGAATCAAATAGACGCAATACAAAATGATAGAGGGGATGTCACCACCGATCCCACAGAAATACAAACTACCATCAGATAATACTATAAACACCTCTATGCAAATAAACTACAAAATCTGGAAGAAATGGATAAATTCCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACGGGCTCTGAAATTGAGGCAATAATTAATAGCTTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGCACCATTCCTTCTGAAACTATTCCAATCAACAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCACCATCATCCTGATACCAAAGCCTGGCAGAGACACAACAAAAAAAGAGAATTTCAGACCAATATCCCTGATGAATATTGATGCAAAAATCCTCAATAAAATACTGGGAAACCGAATCCAGTTGCACATCAAAAAGCTTATCCACCATGACCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATATGAAAATCAATAAATGTAATCCAGCATATAAACAGAACCAATGACAAAAACCACATGATTATCTCAATAGATGCAGAAAGGGCCTTTGACAAAATTCAACAGCCCTTCATGCTAAAACTCTCAATAACTTAGGTATTGATGGGATGTATCTCAAAATAATAAGAGCTATTTATGACAAACCCGCACCCA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5584:HG2_PB_pbsv_1816:HG2_10X_allpass_262:HG3_10X_allpass_322:HG2_PB_HySA_3358:HG4_PB_pbsv_1816:HG4_Ill_MetaSV_2566:HG3_Ill_MetaSV_2618:HG4_PB_HySA_2679:HG3_PB_pbsv_1796:HG4_PB_pbsv_1815:HG2_PB_pbsv_1815:HG4_PB_SVrefine2PBcRDovetail_971:HG4_PB_SVrefine2Falcon1Dovetail_1140:HG3_PB_SVrefine2PBcRDovetail_979:HG3_PB_SVrefine2Falcon1Dovetail_1125;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5584:HG4_PB_SVrefine2PBcRDovetail_971:HG4_PB_SVrefine2Falcon1Dovetail_1140:HG3_PB_SVrefine2PBcRDovetail_979:HG3_PB_SVrefine2Falcon1Dovetail_1125;NumExactMatchSVs=5;ClusterMaxShiftDist=0.00639992;ClusterMaxSizeDiff=0.00635252;ClusterMaxEditDist=0.0106201;PBcalls=12;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-21156;DistBack=757;DistForward=13742;DistMin=757;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2128;REFWIDENED=2:35974079-35997362;PctSeqSimilarity=0.9738;PctSizeSimilarity=0.9999;PctRecOverlap=0.9098;SizeDiff=-2;StartDistance=-1906;EndDistance=-1908;GTMatch=0;TruScore=96;MatchId=1894.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:68:42:0|1:50:1:5:26:0/0:52:0:30:0:0/0:93:0:0/1:495:160:21366:.:.
chr2	36216159	HG2_PB_SVrefine2PBcRplusDovetail_5587	AAATGGTTATTCTGTATAGCAGTGCCTCCCACACATATTTTTCCATTTTGTCCCTTAACTCTCCTGGATAATCCAGATTTCCATTTGCTTATCCAGGTTGCTGAATCTCCTGTCCAGTATGAAAATGCACCATATATTCTATACGGGTTTAAGCAATGAAAAAAAAAATACTAAGTAAGAAAATTTTGGTGTATTTTGTTTATTTATTTATTTATTTATTTTGAGACAGAGTCTTGTTCTGTCATCCAGGCTGTACTACAGTGGCACAATCTCAGCTCACTGCACCCTCCATCCCCCAGGTTCAAGCAATTCTCCTACCTCAGCCACCTGAGTAGCTGGGATTACAGGCGCACACCACCTCTCCCGGTTAATTTTTGTATTTTTAGTAGAGACGAGGTTACACCATGTTGGTCAGGCTGGTCTTGAGCTCCTGACCTCAAGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGCCATGAGCCACCATGCCTGATCAAATTTTAGTGTATTTTAATCAAATACAAAAATATGTGAGTCAAATGATAATGATAGGGCTATTATTCCCAAATAATTATCAGACTTAAAAAGGTCAAATTATCTTTCAACTTATAATATTCCTACTCTATGTCACATAATCCTCTTCCATAGCTCTTTACTGACGTTTCATAGAGCTTCTATTTTCTTTTATAAACTTCTTATGTCTCAAAATTTCTTCATCGTCTACCTCAGTTTTATATGAAAACATTTATGGATGAGAGAGGTTATAAATTTTTCTGTTTTTTTTAATTGTCCAAATACTTCCACAAAAATAATGCTATTTTATGCTGTTTTCCAAGTTGGTACAATACCTTCACAAAATATAAATTGACCTGAATAATTGGAAGTTTATGTCATCAGGTAGTTTACCAAACTGAGACATTCTGATTCTAAATGTTGGGTAATTGGAAGCTTCTAAATAAGAAGGATATTTTATTAATGTGTAATTTCTTTTCTTTTCTATTTTATATAACAAATCTCTTCAACCCATTGGAATCACTTGGGAGTAGAGAAGCTTCTGTCATCTTGCGTCTCCCATAGCCCTGGCTCATACATACCATACATAGTGCTGCAGGTGCTTTTACCTTCTTGCTGCTCCTAGCAGTTAGTTCTTTCACATCTCCAAGTTGGCCTGCCTCAACTAATCCCCCATTTTGTTTTATTTTAAAACATCATTTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATCATTTAGAAGCCTTTTGAAACTTATCTGTTTTTAGAAAAGTACCACTCATTCTAAAGCATTCTTTCCACTCCAGAACTCACATAATTATATTTTCAGGTTAAAAATAATATTAGAATAATAGTGCCAACTTCTTCCATTTTATAAATTAGAAAACTTGGACCTGGATGAAGTGAGGCTGCTTGTTCACCATCATGCAGCTCCTTCAGAAGATCTTCTGCTCCACAAGCTAACAAGAATAGGGATGACAGAAGCAAATAGGACAGCTGGTGGGGGCATCAGTGAAAGGAAAGAGTAGAAGGTCTAGGAGTCCTGGGGCGGGGCAGAGGAGAACTTCCATCTAAGGGCCAAAGAAGTGGGGTGGCGTGGACTTAATGTTTCCTTGTCCTTGACTATAGACCCTCCTCTCACCAACTTGCAAATAACTCCCCTCCAAGAAGAGTTCCATGCTTTTGACCATGACCATCCCTAATTCAGTGCTGCTAGGCAATCCATTACTAAATTCTGCAGGGTAAACAACATTGTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1375:HG3_PB_pbsv_1798:HG2_PB_pbsv_1819:HG4_PB_pbsv_1820:HG4_Ill_MetaSV_2567:HG3_Ill_MetaSV_2619:HG2_Ill_MetaSV_2479:HG4_PB_SVrefine2PBcRDovetail_972:HG4_PB_SVrefine2Falcon1Dovetail_1143:HG4_Ill_SVrefine2DISCOVARDovetail_1261:HG3_PB_SVrefine2PBcRDovetail_980:HG3_PB_SVrefine2Falcon1Dovetail_1127:HG3_Ill_SVrefine2DISCOVARDovetail_1233:HG2_PB_SVrefine2PBcRplusDovetail_5587:HG2_PB_SVrefine2PB10Xhap12_1427:HG2_PB_SVrefine2Falcon2Bionano_676:HG2_PB_SVrefine2Falcon1plusDovetail_6050:HG2_Ill_SVrefine2DISCOVARplusDovetail_6471;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1375:HG4_PB_SVrefine2PBcRDovetail_972:HG4_PB_SVrefine2Falcon1Dovetail_1143:HG4_Ill_SVrefine2DISCOVARDovetail_1261:HG3_PB_SVrefine2PBcRDovetail_980:HG3_PB_SVrefine2Falcon1Dovetail_1127:HG3_Ill_SVrefine2DISCOVARDovetail_1233:HG2_PB_SVrefine2PBcRplusDovetail_5587:HG2_PB_SVrefine2PB10Xhap12_1427:HG2_PB_SVrefine2Falcon2Bionano_676:HG2_PB_SVrefine2Falcon1plusDovetail_6050:HG2_Ill_SVrefine2DISCOVARplusDovetail_6471;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00193611;ClusterMaxSizeDiff=0.00193611;ClusterMaxEditDist=0.00290698;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-2066;DistBack=2195;DistForward=-857;DistMin=-857;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1224;REFWIDENED=2:36216160-36219449;PctSeqSimilarity=0.9937;PctSizeSimilarity=0.999;PctRecOverlap=0.9232;SizeDiff=-2;StartDistance=-157;EndDistance=-159;GTMatch=1;TruScore=97;MatchId=1895.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:22:0:19:./.:0:0:0:0:./.:0:0:./.:6:95:2102:.:.
chr2	36394910	HG2_PB_SVrefine2PBcRplusDovetail_5588	ACAAACTCTATGGTATTTATTCTCTTAGGATATTTTATTATTGTTTTCATTTAGGTGGTTTCAAAGATTTACTTTCACAAACACTTCTGAATGAGAAG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_107:HG4_PB_HySA_2685:HG4_PB_pbsv_1823:HG4_Ill_Krunchall_2433:HG3_PB_pbsv_1800:HG2_PB_pbsv_1821:HG4_PB_assemblyticsfalcon_13168:HG4_PB_SVrefine2PBcRDovetail_973:HG4_PB_SVrefine2Falcon1Dovetail_1144:HG4_Ill_Krunchall_2432:HG4_Ill_GATKHC_2815:HG4_Ill_GATKHCSBGrefine_1195:HG4_Ill_250bpfermikitraw_2296:HG3_PB_assemblyticsfalcon_13390:HG3_PB_SVrefine2Falcon1Dovetail_1128:HG3_Ill_manta_370:HG3_Ill_SVrefine2DISCOVARDovetail_1235:HG3_Ill_Krunchall_2353:HG3_Ill_GATKHC_2894:HG3_Ill_GATKHCSBGrefine_1158:HG3_Ill_250bpfermikitraw_2299:HG2_PB_SVrefine2PBcRplusDovetail_5588:HG2_PB_SVrefine2PB10Xhap12_1428:HG2_Ill_SpiralSDKrefine_8368:HG2_Ill_SVrefine2DISCOVARplusDovetail_6474:HG2_Ill_Krunchall_2334:HG2_Ill_GATKHC_2821:HG2_Ill_GATKHCSBGrefine_1157:HG2_Ill_250bpfermikitraw_2304:HG2_10X_SVrefine210Xhap12_1376:HG4_Ill_Spiral_134:HG3_Ill_Spiral_1849;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1376:HG2_Ill_250bpfermikitraw_2304:HG2_Ill_GATKHCSBGrefine_1157:HG2_Ill_GATKHC_2821:HG2_Ill_Krunchall_2334:HG2_Ill_SVrefine2DISCOVARplusDovetail_6474:HG2_Ill_SpiralSDKrefine_8368:HG2_PB_SVrefine2PB10Xhap12_1428:HG2_PB_SVrefine2PBcRplusDovetail_5588:HG3_Ill_250bpfermikitraw_2299:HG3_Ill_GATKHCSBGrefine_1158:HG3_Ill_GATKHC_2894:HG3_Ill_Krunchall_2353:HG3_Ill_SVrefine2DISCOVARDovetail_1235:HG3_Ill_manta_370:HG3_PB_SVrefine2Falcon1Dovetail_1128:HG3_PB_assemblyticsfalcon_13390:HG4_Ill_250bpfermikitraw_2296:HG4_Ill_GATKHCSBGrefine_1195:HG4_Ill_GATKHC_2815:HG4_Ill_Krunchall_2432:HG4_PB_SVrefine2Falcon1Dovetail_1144:HG4_PB_SVrefine2PBcRDovetail_973:HG4_PB_assemblyticsfalcon_13168;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.0952381;PBcalls=11;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-97;DistBack=1910;DistForward=-30;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=99;REFWIDENED=2:36394911-36395106;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1896.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:28:0|1:37:2:1:21:0|1:20:1:0:26:0/1:39:34:./.:.:.:.:.:.
chr2	36732450	HG3_Ill_SVrefine2DISCOVARDovetail_1237	AAATGACATGTAACAAAACCAGTTTTACCAGAGGCTAATTGATATAAACAAGAGTTAAGTTCCTACCATATATTTCTGGTCACGAAAACATCACCAAACTTCTAAATAAAGACCTAAAACATTTCTAATAGTAACAATTAAAGTAAGCATGAGTTATATATACATTTAAGAAAGGTTAACAAAAAACAAGTACAATGATGATTCCCCATTTTTAATGAATCAGTGAGTGATAGTGGTTGTAGTGGTGCTGTGTTG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6054:HG3_PB_HySA_2723:HG3_PB_pbsv_1802:HG4_PB_pbsv_1825:HG2_PB_pbsv_1823:HG4_PB_SVrefine2Falcon1Dovetail_1147:HG3_PB_SVrefine2PBcRDovetail_983:HG3_PB_SVrefine2Falcon1Dovetail_1133:HG3_Ill_SVrefine2DISCOVARDovetail_1237:HG2_PB_SVrefine2PBcRplusDovetail_5592:HG2_PB_SVrefine2PB10Xhap12_1432;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6054:HG4_PB_SVrefine2Falcon1Dovetail_1147:HG3_PB_SVrefine2PBcRDovetail_983:HG3_PB_SVrefine2Falcon1Dovetail_1133:HG3_Ill_SVrefine2DISCOVARDovetail_1237:HG2_PB_SVrefine2PBcRplusDovetail_5592:HG2_PB_SVrefine2PB10Xhap12_1432;NumExactMatchSVs=7;ClusterMaxShiftDist=0.015748;ClusterMaxSizeDiff=0.015748;ClusterMaxEditDist=0.019802;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-254;DistBack=0;DistForward=-254;DistMin=-254;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=257;REFWIDENED=2:36732451-36732961;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1897.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:38:0|1:24:2:0:27:./.:0:3:23:1:0/1:20:5:./.:.:.:.:.:.
chr2	36955660	HG2_PB_SVrefine2PBcRplusDovetail_5594	TAAAGAAAAAATATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1378:HG2_10X_allpass_263:HG2_PB_assemblyticsPBcR_12925:HG4_Ill_Krunchall_2441:HG3_Ill_Krunchall_2359:HG3_PB_assemblyticsfalcon_13401:HG4_PB_assemblyticsfalcon_13178:HG2_PB_assemblyticsfalcon_13341:HG4_PB_HySA_2694:HG4_PB_pbsv_1827:HG2_PB_pbsv_1825:HG3_PB_SVrefine2Falcon1Dovetail_1135:HG2_Ill_tnscope_184:HG4_PB_SVrefine2PBcRDovetail_975:HG4_PB_SVrefine2Falcon1Dovetail_1149:HG4_Ill_manta_425:HG4_Ill_MetaSV_2569:HG4_Ill_GATKHCSBGrefine_1197:HG4_10X_allpass_300:HG3_PB_pbsv_1804:HG3_Ill_manta_371:HG3_Ill_SVrefine2DISCOVARDovetail_1239:HG3_Ill_GATKHCSBGrefine_1161:HG3_10X_allpass_323:HG2_PB_SVrefine2PBcRplusDovetail_5594:HG2_PB_SVrefine2PB10Xhap12_1434:HG2_PB_SVrefine2Falcon2Bionano_680:HG2_PB_SVrefine2Falcon1plusDovetail_6056:HG2_Ill_scalpel_1654:HG2_Ill_manta_489:HG2_Ill_SVrefine2DISCOVARplusDovetail_6476:HG2_Ill_MetaSV_2482:HG2_Ill_GATKHCSBGrefine_1161;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1378:HG4_PB_SVrefine2PBcRDovetail_975:HG4_PB_SVrefine2Falcon1Dovetail_1149:HG4_Ill_manta_425:HG4_Ill_MetaSV_2569:HG4_Ill_GATKHCSBGrefine_1197:HG4_10X_allpass_300:HG3_PB_pbsv_1804:HG3_Ill_manta_371:HG3_Ill_SVrefine2DISCOVARDovetail_1239:HG3_Ill_GATKHCSBGrefine_1161:HG3_10X_allpass_323:HG2_PB_SVrefine2PBcRplusDovetail_5594:HG2_PB_SVrefine2PB10Xhap12_1434:HG2_PB_SVrefine2Falcon2Bionano_680:HG2_PB_SVrefine2Falcon1plusDovetail_6056:HG2_Ill_scalpel_1654:HG2_Ill_manta_489:HG2_Ill_SVrefine2DISCOVARplusDovetail_6476:HG2_Ill_MetaSV_2482:HG2_Ill_GATKHCSBGrefine_1161;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0900322;ClusterMaxSizeDiff=0.0900322;ClusterMaxEditDist=0.0900322;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=-465;DistForward=-303;DistMin=-465;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=2:36955661-36955990;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1898.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:59:1/1:5:18:2:24:1/1:0:21:0:17:1/1:0:51:./.:2:22:.:.:.
chr2	38040911	HG2_Ill_GATKHCSBGrefine_1165	GAAGGTTCAATTTGACTTCTGGACTCATGGCTATTTTCAGAAAGTGTGTTTTCTGGA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_1834:HG3_PB_HySA_2734:HG2_PB_HySA_3383:HG4_PB_assemblyticsfalcon_13192:HG3_PB_assemblyticsfalcon_13417:HG3_Ill_svaba_2247:HG3_Ill_scalpel_1777:HG3_Ill_manta_373:HG3_Ill_Krunchall_2368:HG3_Ill_GATKHC_2919:HG3_Ill_GATKHCSBGrefine_1164:HG3_Ill_250bpfermikitraw_2317:HG3_Ill_150bpfermikitraw_2221:HG3_CG_vcfBeta_1009:HG3_10X_allpass_324:HG2_Ill_svaba_2180:HG2_Ill_scalpel_1662:HG2_Ill_breakscan11_234:HG2_Ill_SpiralSDKrefine_8379:HG2_Ill_Krunchall_2352:HG2_Ill_GATKHC_2849:HG2_Ill_GATKHCSBGrefine_1165:HG2_Ill_250bpfermikitraw_2322:HG2_Ill_150bpfermikitraw_2134:HG2_CG_vcfBeta_1046:HG2_10X_allpass_265:HG3_PB_pbsv_1811;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_265:HG2_CG_vcfBeta_1046:HG2_Ill_150bpfermikitraw_2134:HG2_Ill_250bpfermikitraw_2322:HG2_Ill_GATKHCSBGrefine_1165:HG2_Ill_GATKHC_2849:HG2_Ill_Krunchall_2352:HG2_Ill_SpiralSDKrefine_8379:HG2_Ill_breakscan11_234:HG2_Ill_scalpel_1662:HG2_Ill_svaba_2180:HG3_10X_allpass_324:HG3_CG_vcfBeta_1009:HG3_Ill_150bpfermikitraw_2221:HG3_Ill_250bpfermikitraw_2317:HG3_Ill_GATKHCSBGrefine_1164:HG3_Ill_GATKHC_2919:HG3_Ill_Krunchall_2368:HG3_Ill_manta_373:HG3_Ill_scalpel_1777:HG3_Ill_svaba_2247:HG3_PB_assemblyticsfalcon_13417:HG4_PB_assemblyticsfalcon_13192;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0175439;ClusterMaxSizeDiff=0.0173913;ClusterMaxEditDist=0.0695652;PBcalls=6;Illcalls=17;TenXcalls=2;CGcalls=2;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=2;HG2count=13;HG3count=13;HG4count=1;NumTechs=4;NumTechsExact=4;SVLEN=-56;DistBack=2200;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:38040910-38040969;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1899.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:35:0|1:14:4:3:21:1|0:0:24:26:1:0/1:46:28:./.:.:.:.:.:.
chr2	39071477	HG4_Ill_SVrefine2DISCOVARDovetail_1274	TAAAGAAATGATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1384:HG3_Ill_GATKHCSBGrefine_1168:HG2_Ill_GATKHCSBGrefine_1172:HG4_PB_pbsv_1838:HG3_Ill_Krunchall_2378:HG2_PB_pbsv_1840:HG2_Ill_Krunchall_2363:HG3_PB_assemblyticsfalcon_13425:HG2_PB_assemblyticsfalcon_13360:HG2_PB_assemblyticsPBcR_12952:HG4_Ill_Krunchall_2460:HG2_Ill_Krunchall_2362:HG3_PB_HySA_2748:HG3_PB_SVrefine2PBcRDovetail_989:HG3_PB_SVrefine2Falcon1Dovetail_1139:HG3_Ill_SVrefine2DISCOVARDovetail_1249:HG2_Ill_manta_493:HG2_10X_SVrefine210Xhap12_1385:HG3_Ill_Spiral_1866:HG2_Ill_Spiral_109:HG2_Ill_MetaSV_2483:HG4_Ill_MetaSV_2570:HG2_PB_SVrefine2Falcon1plusDovetail_6060:HG2_Ill_tnscope_185:HG2_Ill_breakscan11_235:HG4_PB_assemblyticsfalcon_13199:HG4_PB_SVrefine2PBcRDovetail_979:HG4_Ill_SVrefine2DISCOVARDovetail_1274:HG4_Ill_GATKHCSBGrefine_1211:HG4_10X_allpass_301:HG3_PB_pbsv_1818:HG3_Ill_MetaSV_2623:HG3_10X_allpass_326:HG2_PB_SVrefine2PBcRplusDovetail_5598:HG2_PB_SVrefine2PB10Xhap12_1443:HG2_PB_SVrefine2Falcon2Bionano_686:HG2_PB_HySA_3397:HG2_Ill_scalpel_1665:HG2_Ill_SVrefine2DISCOVARplusDovetail_6486:HG2_Ill_GATKHCSBGrefine_1171:HG2_10X_allpass_266;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1384:HG4_PB_assemblyticsfalcon_13199:HG4_PB_SVrefine2PBcRDovetail_979:HG4_Ill_SVrefine2DISCOVARDovetail_1274:HG4_Ill_GATKHCSBGrefine_1211:HG4_10X_allpass_301:HG3_PB_pbsv_1818:HG3_Ill_MetaSV_2623:HG3_10X_allpass_326:HG2_PB_SVrefine2PBcRplusDovetail_5598:HG2_PB_SVrefine2PB10Xhap12_1443:HG2_PB_SVrefine2Falcon2Bionano_686:HG2_PB_HySA_3397:HG2_Ill_scalpel_1665:HG2_Ill_SVrefine2DISCOVARplusDovetail_6486:HG2_Ill_GATKHCSBGrefine_1171:HG2_10X_allpass_266;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0798817;ClusterMaxSizeDiff=0.0798817;ClusterMaxEditDist=0.0798817;PBcalls=16;Illcalls=20;TenXcalls=5;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=4;CGexactcalls=0;HG2count=22;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-342;DistBack=6723;DistForward=-331;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:39071478-39071832;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1900.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:33:1:17:1/1:0:30:0:24:1/1:0:46:0/1:2:17:.:.:.
chr2	40446946	HG2_PB_SVrefine2PB10Xhap12_1445	CTTTGTTTGCTATGCATGAGATTGCTTGAAAAATGTGATTTAGCTCCAACAGAGCCTCCCTACTATAGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAAAATCAATACATCTTTCTGTCAAAATT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_1845:HG2_PB_HySA_3412:HG2_Ill_MetaSV_2484:HG4_Ill_svaba_2220:HG4_Ill_manta_432:HG4_Ill_SVrefine2DISCOVARDovetail_1278:HG4_Ill_GATKHCSBGrefine_1217:HG4_CG_vcfBeta_1174:HG4_10X_allpass_303:HG3_PB_pbsv_1825:HG3_PB_SVrefine2PBcRDovetail_994:HG3_Ill_svaba_2263:HG3_Ill_scalpel_1792:HG3_Ill_manta_377:HG3_Ill_SVrefine2DISCOVARDovetail_1259:HG3_Ill_GATKHCSBGrefine_1176:HG3_CG_vcfBeta_1017:HG3_10X_allpass_328:HG2_PB_pbsv_1847:HG2_PB_assemblyticsfalcon_13375:HG2_PB_assemblyticsPBcR_12964:HG2_PB_SVrefine2PBcRplusDovetail_5601:HG2_PB_SVrefine2PB10Xhap12_1445:HG2_PB_SVrefine2Falcon2Bionano_689:HG2_PB_SVrefine2Falcon1plusDovetail_6063:HG2_Ill_svaba_2198:HG2_Ill_scalpel_1676:HG2_Ill_manta_497:HG2_Ill_SpiralSDKrefine_8388:HG2_Ill_SVrefine2DISCOVARplusDovetail_6490:HG2_Ill_GATKHCSBGrefine_1179:HG2_CG_vcfBeta_1059:HG2_10X_allpass_267:HG2_10X_SVrefine210Xhap12_1391:HG3_Ill_Krunchall_2391:HG2_Ill_breakscan11_236;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1391:HG2_10X_allpass_267:HG2_CG_vcfBeta_1059:HG2_Ill_GATKHCSBGrefine_1179:HG2_Ill_SVrefine2DISCOVARplusDovetail_6490:HG2_Ill_SpiralSDKrefine_8388:HG2_Ill_manta_497:HG2_Ill_scalpel_1676:HG2_Ill_svaba_2198:HG2_PB_SVrefine2Falcon1plusDovetail_6063:HG2_PB_SVrefine2Falcon2Bionano_689:HG2_PB_SVrefine2PB10Xhap12_1445:HG2_PB_SVrefine2PBcRplusDovetail_5601:HG2_PB_assemblyticsPBcR_12964:HG2_PB_assemblyticsfalcon_13375:HG2_PB_pbsv_1847:HG3_10X_allpass_328:HG3_CG_vcfBeta_1017:HG3_Ill_GATKHCSBGrefine_1176:HG3_Ill_SVrefine2DISCOVARDovetail_1259:HG3_Ill_manta_377:HG3_Ill_scalpel_1792:HG3_Ill_svaba_2263:HG3_PB_SVrefine2PBcRDovetail_994:HG3_PB_pbsv_1825:HG4_10X_allpass_303:HG4_CG_vcfBeta_1174:HG4_Ill_GATKHCSBGrefine_1217:HG4_Ill_SVrefine2DISCOVARDovetail_1278:HG4_Ill_manta_432:HG4_Ill_svaba_2220;NumExactMatchSVs=31;ClusterMaxShiftDist=0.015625;ClusterMaxSizeDiff=0.015625;ClusterMaxEditDist=0.0387597;PBcalls=11;Illcalls=18;TenXcalls=4;CGcalls=3;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=3;HG2count=19;HG3count=10;HG4count=7;NumTechs=4;NumTechsExact=4;SVLEN=-127;DistBack=771;DistForward=-124;DistMin=-124;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:40446947-40447074;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1901.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:56:1/1:1:35:3:10:1/1:0:16:0:26:1/1:0:37:./.:.:.:.:.:.
chr2	40481592	HG2_Ill_150bpfermikitraw_2152	GAAAACATGAAGCTAAATGCAGTAAAGAATTACTCTCTTGAACTCTTGAAAATATCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1392:HG2_PB_HySA_3414:HG2_PB_pbsv_1848:HG4_Ill_svaba_2221:HG4_Ill_manta_433:HG4_Ill_Krunchall_2469:HG4_Ill_GATKHC_2867:HG4_Ill_GATKHCSBGrefine_1218:HG4_Ill_250bpfermikitraw_2339:HG4_Ill_150bpfermikitraw_2263:HG2_Ill_svaba_2200:HG2_Ill_manta_498:HG2_Ill_Krunchall_2374:HG2_Ill_GATKHC_2875:HG2_Ill_GATKHCSBGrefine_1180:HG2_Ill_250bpfermikitraw_2346:HG2_Ill_150bpfermikitraw_2152:HG4_PB_pbsv_1846:HG4_Ill_SVrefine2DISCOVARDovetail_1279:HG2_PB_SVrefine2PBcRplusDovetail_5602:HG2_PB_SVrefine2PB10Xhap12_1446:HG2_PB_SVrefine2Falcon2Bionano_690:HG2_PB_SVrefine2Falcon1plusDovetail_6064;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2152:HG2_Ill_250bpfermikitraw_2346:HG2_Ill_GATKHCSBGrefine_1180:HG2_Ill_GATKHC_2875:HG2_Ill_Krunchall_2374:HG2_Ill_manta_498:HG2_Ill_svaba_2200:HG4_Ill_150bpfermikitraw_2263:HG4_Ill_250bpfermikitraw_2339:HG4_Ill_GATKHCSBGrefine_1218:HG4_Ill_GATKHC_2867:HG4_Ill_Krunchall_2469:HG4_Ill_manta_433:HG4_Ill_svaba_2221;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0357143;PBcalls=7;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-56;DistBack=523;DistForward=-36;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=61;REFWIDENED=2:40481588-40481704;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1902.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:33:./.:17:8:1:21:0|1:23:1:0:15:0/1:42:16:./.:.:.:.:.:.
chr2	40882495	HG4_Ill_svaba_2223	GTTTTAATTATTCTATATTTTACATATATTACAAGTATTTTTATTACAGAAAATGAATCATCTT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_1850:HG3_Ill_Spiral_1877:HG2_PB_HySA_3419:HG2_Ill_Spiral_110:HG4_PB_pbsv_1848:HG4_Ill_svaba_2223:HG4_Ill_scalpel_1619:HG4_Ill_manta_434:HG4_Ill_Krunchall_2473:HG4_Ill_GATKHC_2872:HG4_Ill_GATKHCSBGrefine_1219:HG4_Ill_Cortex_1779:HG4_Ill_250bpfermikitraw_2342:HG4_Ill_150bpfermikitraw_2266:HG4_CG_vcfBeta_1177:HG4_10X_allpass_304:HG3_PB_pbsv_1828:HG3_PB_assemblyticsfalcon_13444:HG3_Ill_svaba_2268:HG3_Ill_manta_379:HG3_Ill_Krunchall_2400:HG3_Ill_GATKHC_2951:HG3_Ill_GATKHCSBGrefine_1178:HG3_Ill_Cortex_1829:HG3_Ill_250bpfermikitraw_2340:HG3_Ill_150bpfermikitraw_2240:HG3_CG_vcfBeta_1022:HG3_10X_allpass_329:HG2_PB_assemblyticsPBcR_12969:HG2_Ill_svaba_2201:HG2_Ill_manta_499:HG2_Ill_breakscan11_237:HG2_Ill_Krunchall_2376:HG2_Ill_GATKHC_2877:HG2_Ill_GATKHCSBGrefine_1181:HG2_Ill_Cortex_4250:HG2_Ill_250bpfermikitraw_2348:HG2_Ill_150bpfermikitraw_2154:HG2_CG_vcfBeta_1062;NumClusterSVs=39;ExactMatchIDs=HG2_CG_vcfBeta_1062:HG2_Ill_150bpfermikitraw_2154:HG2_Ill_250bpfermikitraw_2348:HG2_Ill_Cortex_4250:HG2_Ill_GATKHCSBGrefine_1181:HG2_Ill_GATKHC_2877:HG2_Ill_Krunchall_2376:HG2_Ill_breakscan11_237:HG2_Ill_manta_499:HG2_Ill_svaba_2201:HG2_PB_assemblyticsPBcR_12969:HG3_10X_allpass_329:HG3_CG_vcfBeta_1022:HG3_Ill_150bpfermikitraw_2240:HG3_Ill_250bpfermikitraw_2340:HG3_Ill_Cortex_1829:HG3_Ill_GATKHCSBGrefine_1178:HG3_Ill_GATKHC_2951:HG3_Ill_Krunchall_2400:HG3_Ill_manta_379:HG3_Ill_svaba_2268:HG3_PB_assemblyticsfalcon_13444:HG3_PB_pbsv_1828:HG4_10X_allpass_304:HG4_CG_vcfBeta_1177:HG4_Ill_150bpfermikitraw_2266:HG4_Ill_250bpfermikitraw_2342:HG4_Ill_Cortex_1779:HG4_Ill_GATKHCSBGrefine_1219:HG4_Ill_GATKHC_2872:HG4_Ill_Krunchall_2473:HG4_Ill_manta_434:HG4_Ill_scalpel_1619:HG4_Ill_svaba_2223:HG4_PB_pbsv_1848;NumExactMatchSVs=35;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.03125;PBcalls=6;Illcalls=28;TenXcalls=2;CGcalls=3;PBexactcalls=4;Illexactcalls=26;TenXexactcalls=2;CGexactcalls=3;HG2count=14;HG3count=13;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-63;DistBack=57526;DistForward=95580;DistMin=57526;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=2:40882496-40882561;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1903.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:53:1|0:5:39:32:4:0|1:41:0:0:34:0/1:32:33:./.:.:.:.:.:.
chr2	41775967	HG2_Ill_SVrefine2DISCOVARplusDovetail_6494	AAAGCTAGAAAAAACAGCTCAATAATCAGGCTTCACGAGAATTCCTGTTTAAATACTACCTTATAATTAATAGACTAACCCTTCTAATTTTCATTTGAAAATTAATTCTCAATTTGGCTGGAGTGCACATGACAAGGTAACGCATATAGTAGATATCCAAATAGATATTAACTGACCGATAAGCAATGACTGATATGGTCATTTTCCTCCATTCCACAAAATACTAAGTACCTAACGTGGATTACAGAAGCCTGATAGATTACTCTCTTTCCTGACAATCACAGACAAAATAAAATATCCCAGAAAAAGGCTTTTGTATCTGTTGTTCTTAAACCTTTCTACAATATCATTTTTGAATAAGACTGTAGGCCATGCACACCAATTTGAGTCACAAGGCACTATGGAGTCCCATATTATACCAGGAAAGCACAAAACAGTATTCTGTGATGTCACAGAATAGAGAATGTTACATCAGCAAATATTTTAACAAAGTACAATATATATCTATAAAAAAGCATATATGTATAAGTACATAAGTATACAGGCATTTTATACTTGAATTTAACACTAAACATATAGCGAACATCCTCATTTTTCTTTAACTATTTATAAAACATATCAAAATTTTCCAAAATTTTTAGGTTATCTTGTGAAGATGAGCAGATTCACAGAAATGCTAGATAGATATTCAGTAAACTGAATATAACAGCTTTTGCTAAGTGATACTATAGCAACCTTTATTTTTACTCTAGAAATTATCCTCACACACAAAAAACACTCTGCTATTTCATGGATTCAGTGAAATTTTATAAAGAAGTCTAATGGGTATAGTGTTTCTTGTTGTGATGATGAAGATGTGCCAGAATTAAATCATAGTGTCAGTTGCACTATCTTGTGAATATACTAAAAAACTACCAATAACTTACTTCCAAAGGATGAATCTTATTGTATGTGAATTATAGTTCAATAATACAGAAGAAATAACTCTTCTATTTGATAAAAAATCTGTCCTATTTAATGTTATACATTAAAGCTATATAATTAACACAATATTCTGATTAACAATCACATATAATTTGAAAAACTTCCTTCAGGGTTAATAGCAAAGAAGATAATAATATGAAGTTTTATTTTATTTGTGAGGGTGGGCAAGAGAAATAGTGTTCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACTGTCCCCAGAGTGCGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGGCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTCGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAGAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTCTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCTATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCAGCGTTATTGCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAATGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCAGTAAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTGTACCAGAGGTACAAGGAGGAACTGATACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGGCAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATAGTGTTCATTTCTAATTCAGGGACTAACTTTCATAGAGGTTGTAATAATCTACAATCTCATCAACAATATAAGCATTCCCTTTTCTCTGCATCATTGCCAAAATCTGTTATTTTACTTGTTCACAATAGACATTCTACTGTATAAGATGATATCTCATTGTTGTTTTAATTTGTATATCTCTGATGATTAGTGACATTGATCAATTTTTCATATGCTTATGGGCCATTTGTACGTCTTCTTTTTAAAAATGTCTGTTCTTTTCCTTTGCCCACTTTTCAATGGAGTTGTTTTTCTCTTGCAAATTTGTTTAAGTTTCTTATGATGCTAGATATCAGGCCTTTGTTGGGTGCATAGTTTGCAAATATTTTCTCCCATTCTGTAGGTTGCCTGTTTATTCTGTTGATAGTTTCTTTGACTGTACAGAAGCTCTTAAATTTAA	G	20	PASS	ClusterIDs=HG2_10X_allpass_268:HG3_10X_allpass_331:HG3_Ill_GATKHCSBGrefine_1181:HG2_Ill_GATKHCSBGrefine_1183:HG2_Ill_tnscope_186:HG4_PB_assemblyticsfalcon_13215:HG4_PB_SVrefine2PBcRDovetail_984:HG3_PB_SVrefine2PBcRDovetail_998:HG3_Ill_SVrefine2DISCOVARDovetail_1269:HG2_PB_SVrefine2PBcRplusDovetail_5604:HG2_PB_SVrefine2PB10Xhap12_1448:HG2_PB_SVrefine2Falcon2Bionano_692:HG2_PB_SVrefine2Falcon1plusDovetail_6068:HG2_PB_PB10Xdip_17441:HG2_Ill_SVrefine2DISCOVARplusDovetail_6494:HG2_10X_SVrefine210Xhap12_1394:HG4_10X_allpass_305:HG2_PB_assemblyticsfalcon_13387:HG2_PB_assemblyticsPBcR_12976:HG3_PB_pbsv_1831:HG2_PB_pbsv_1853:HG4_PB_pbsv_1851:HG2_Ill_breakscan11_238:HG2_Ill_Krunchall_2384:HG3_Ill_MetaSV_2626:HG4_Ill_MetaSV_2573:HG2_Ill_MetaSV_2485;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1394:HG2_Ill_SVrefine2DISCOVARplusDovetail_6494:HG2_PB_PB10Xdip_17441:HG2_PB_SVrefine2Falcon1plusDovetail_6068:HG2_PB_SVrefine2Falcon2Bionano_692:HG2_PB_SVrefine2PB10Xhap12_1448:HG2_PB_SVrefine2PBcRplusDovetail_5604:HG3_Ill_SVrefine2DISCOVARDovetail_1269:HG3_PB_SVrefine2PBcRDovetail_998:HG4_PB_SVrefine2PBcRDovetail_984:HG4_PB_assemblyticsfalcon_13215;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00150489;ClusterMaxSizeDiff=0.00150489;ClusterMaxEditDist=0.00150489;PBcalls=13;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-5316;DistBack=12692;DistForward=60043;DistMin=12692;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:41775967-41781283;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1904.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:108:1/1:3:27:0:16:1/1:0:15:0:21:1/1:0:37:1/1:1:372:5348:.:.
chr2	41973141	HG2_PB_SVrefine2Falcon2Bionano_693	TAAAAACCTCACATGCGCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCGTCCCTCCCTCTCCGTCTCCGTCTCCGTCTCCGTCTCCCTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGACCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAACCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCCGGCCGCCCAGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCTCACCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCAGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCCGCCCGGCAGCCACCCCATCCGGGAGGGAGGTGAGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGCAAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCTGCCCCGTCCGCGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGACCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_239:HG3_10X_allpass_332:HG4_PB_pbsv_1852:HG2_10X_allpass_270:HG4_10X_allpass_306:HG4_Ill_Krunchall_2481:HG3_Ill_Krunchall_2409:HG2_Ill_Krunchall_2387:HG2_PB_assemblyticsfalcon_13390:HG2_PB_assemblyticsPBcR_12977:HG4_PB_assemblyticsfalcon_13217:HG3_PB_pbsv_1832:HG4_Ill_MetaSV_2574:HG2_Ill_tnscope_187:HG4_PB_SVrefine2PBcRDovetail_985:HG4_Ill_SVrefine2DISCOVARDovetail_1282:HG4_Ill_GATKHCSBGrefine_1221:HG3_PB_SVrefine2PBcRDovetail_999:HG3_Ill_MetaSV_2627:HG3_Ill_GATKHCSBGrefine_1182:HG2_PB_pbsv_1854:HG2_PB_SVrefine2PBcRplusDovetail_5605:HG2_PB_SVrefine2PB10Xhap12_1449:HG2_PB_SVrefine2Falcon2Bionano_693:HG2_PB_SVrefine2Falcon1plusDovetail_6069:HG2_Ill_SVrefine2DISCOVARplusDovetail_6495:HG2_Ill_MetaSV_2486:HG2_Ill_GATKHCSBGrefine_1184:HG2_10X_SVrefine210Xhap12_1396;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1396:HG2_Ill_GATKHCSBGrefine_1184:HG2_Ill_MetaSV_2486:HG2_Ill_SVrefine2DISCOVARplusDovetail_6495:HG2_PB_SVrefine2Falcon1plusDovetail_6069:HG2_PB_SVrefine2Falcon2Bionano_693:HG2_PB_SVrefine2PB10Xhap12_1449:HG2_PB_SVrefine2PBcRplusDovetail_5605:HG2_PB_pbsv_1854:HG3_Ill_GATKHCSBGrefine_1182:HG3_Ill_MetaSV_2627:HG3_PB_SVrefine2PBcRDovetail_999:HG4_Ill_GATKHCSBGrefine_1221:HG4_Ill_SVrefine2DISCOVARDovetail_1282:HG4_PB_SVrefine2PBcRDovetail_985;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0106676;ClusterMaxSizeDiff=0.0106676;ClusterMaxEditDist=0.0106676;PBcalls=12;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2724;DistBack=10173;DistForward=8442;DistMin=8442;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:41973142-41975880;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1905.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:75:1/1:2:17:1:11:1/1:0:31:0:40:1/1:0:38:1/1:4:174:2688:.:.
chr2	42346260	HG4_Ill_SVrefine2DISCOVARDovetail_1286	CCTTTGTTGTCCCACCCTTCTTTCTGCAACCACTGATCTGCTTTCTATCACTATGGATTAATTTGTATTTTCTAGAAGCTTAAATAAGTGAAACCATATGGTGTGCATGTTTTGCAGGGAGAGGGCAGGGGGAGCTGGTTTCTTTCACTCGGTGTAATTGTTCTGAGAGTCATCCGTGTTTGCATGTGTTAATAGTTTATTCTTTTTATCGGTAAGTAGTATCCCATTGTGTGGATGTACCACATGTTGTCTAACCATTCACAACTAAAGGATACTTGGGTTGTTTCTCATTTGGGGCAATTGAAAATAAGCAGTATAAACTGCTATAAACAGTCATGTACAGATATAAGCATGTATGTTTCCATTTTTCAAGGTAAATACCTAGAAGTGGGTATGGTAAGTGTATGTTTAACTTGAAAAGAAACTACCAAAATGTTTCCAAAGTGGTTGTACCATTTTGCTTACCTACCAGAAATGTGTAAGAGTTCTAGTTACTCCACATACTTCCTAGCAGTTGATATTCTCAGTTTTTTTTTTTATTTTAACCGTTCTAATAGCTGTGTAATGGTATTCCATTACAGTACTAATTTAAATTTCCCTAATAACTACTGAGGTTGAAAAAATCTTTCATGGGCATATTTGCCATCCTTGTATCTTCTCTGGTGACGAATCTTTCATGCCTTCTGCTTATATTTTAACCAGGGTTTTGTTTTGCTTTTTCTTAACTGTTGAGTTTTAAGAGTCTATATATACTGCAAACAACTCCTTGGTAAGATATATGATTGGCAAATCCTTTCTCCTAATCTTTTTATTTCCTTAACAATGCCTTTCAAGAACAGAAATTCTTAATTTGATGCAATGCAATTTATTAGTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTCCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCACACCACCACGCCTGGCTAATTT	TGTA	20	PASS	ClusterIDs=HG3_PB_pbsv_1834:HG4_Ill_GATKHCSBGrefine_1224:HG3_Ill_GATKHCSBGrefine_1185:HG2_Ill_GATKHCSBGrefine_1187:HG2_PB_pbsv_1856:HG2_Ill_tnscope_188:HG4_PB_assemblyticsfalcon_13220:HG4_PB_SVrefine2PBcRDovetail_986:HG4_Ill_SVrefine2DISCOVARDovetail_1286:HG3_PB_assemblyticsfalcon_13454:HG2_PB_SVrefine2PBcRplusDovetail_5606:HG2_PB_SVrefine2PB10Xhap12_1451:HG2_PB_SVrefine2Falcon2Bionano_694:HG2_PB_SVrefine2Falcon1plusDovetail_6070:HG2_PB_PB10Xdip_17444:HG2_PB_PB10Xdip_17443:HG2_Ill_SVrefine2DISCOVARplusDovetail_6497:HG2_10X_SVrefine210Xhap12_1398:HG2_Ill_SpiralSDKrefine_8402:HG2_PB_HySA_3432:HG4_Ill_MetaSV_2575:HG4_10X_allpass_307:HG3_Ill_MetaSV_2628:HG3_10X_allpass_333:HG2_Ill_MetaSV_2487:HG2_10X_allpass_271:HG4_Ill_Krunchall_2487:HG3_Ill_Krunchall_2414:HG2_Ill_Krunchall_2390:HG2_PB_assemblyticsfalcon_13393:HG2_PB_assemblyticsPBcR_12983:HG4_Ill_Krunchall_2486:HG4_PB_pbsv_1854;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1398:HG2_Ill_SVrefine2DISCOVARplusDovetail_6497:HG2_PB_PB10Xdip_17443:HG2_PB_PB10Xdip_17444:HG2_PB_SVrefine2Falcon1plusDovetail_6070:HG2_PB_SVrefine2Falcon2Bionano_694:HG2_PB_SVrefine2PB10Xhap12_1451:HG2_PB_SVrefine2PBcRplusDovetail_5606:HG3_PB_assemblyticsfalcon_13454:HG4_Ill_SVrefine2DISCOVARDovetail_1286:HG4_PB_SVrefine2PBcRDovetail_986:HG4_PB_assemblyticsfalcon_13220;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0690326;ClusterMaxSizeDiff=0.0690326;ClusterMaxEditDist=0.0690326;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1055;DistBack=-1;DistForward=76030;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:42346260-42347318;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.9981;PctRecOverlap=0.9981;SizeDiff=-2;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1906.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:1:13:0:23:1/1:0:39:0:24:1/1:0:34:1/1:2:69:1247:.:.
chr2	42832408	HG3_PB_pbsv_1838	CACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCTGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCCTCACCTCCCGGACGGGGCGGCTGGCGGGCAGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCGGGCGGGGGGCTG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1452:HG4_PB_SVrefine2Falcon1Dovetail_1156:HG4_PB_pbsv_1855:HG3_PB_pbsv_1838:HG2_PB_pbsv_1857;NumClusterSVs=5;ExactMatchIDs=HG3_PB_pbsv_1838:HG4_PB_pbsv_1855;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0704;ClusterMaxSizeDiff=0.0672;ClusterMaxEditDist=0.184713;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-301;DistBack=-245;DistForward=-284;DistMin=-284;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5188;REFWIDENED=2:42822549-42832546;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9934;PctRecOverlap=0.9013;SizeDiff=-2;StartDistance=-28;EndDistance=-30;GTMatch=0;TruScore=95;MatchId=1907.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:20:0|1:28:3:4:14:./.:4:0:0:2:0/1:28:8:0/1:8:2:.:.:.
chr2	44636234	HG2_Ill_SpiralSDKrefine_8412	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1404:HG3_Ill_Krunchall_2436:HG2_Ill_Krunchall_2407:HG4_Ill_svaba_2254:HG4_Ill_Krunchall_2505:HG4_Ill_GATKHC_2909:HG4_Ill_GATKHCSBGrefine_1229:HG4_Ill_250bpfermikitraw_2376:HG4_Ill_150bpfermikitraw_2303:HG4_10X_allpass_308:HG3_Ill_svaba_2300:HG3_Ill_Krunchall_2435:HG3_Ill_GATKHC_2992:HG3_Ill_GATKHCSBGrefine_1191:HG3_Ill_250bpfermikitraw_2369:HG3_Ill_150bpfermikitraw_2274:HG2_Ill_svaba_2227:HG2_Ill_manta_502:HG2_Ill_SpiralSDKrefine_8412:HG2_Ill_Krunchall_2406:HG2_Ill_GATKHC_2916:HG2_Ill_GATKHCSBGrefine_1191:HG2_Ill_250bpfermikitraw_2379:HG2_Ill_150bpfermikitraw_2183:HG2_10X_allpass_273:HG4_PB_assemblyticsfalcon_13236:HG2_Ill_breakscan11_241:HG4_PB_pbsv_1860:HG2_PB_pbsv_1861:HG3_PB_pbsv_1845:HG2_PB_SVrefine2Falcon1plusDovetail_6074:HG4_PB_SVrefine2PBcRDovetail_989:HG4_PB_HySA_2745:HG4_Ill_SVrefine2DISCOVARDovetail_1301:HG3_PB_SVrefine2Falcon1Dovetail_1149:HG3_Ill_SVrefine2DISCOVARDovetail_1282:HG2_PB_SVrefine2PBcRplusDovetail_5609:HG2_PB_SVrefine2PB10Xhap12_1455:HG2_PB_SVrefine2Falcon2Bionano_698:HG2_PB_HySA_3445:HG2_Ill_SVrefine2DISCOVARplusDovetail_6513;NumClusterSVs=41;ExactMatchIDs=HG2_10X_allpass_273:HG2_Ill_150bpfermikitraw_2183:HG2_Ill_250bpfermikitraw_2379:HG2_Ill_GATKHCSBGrefine_1191:HG2_Ill_GATKHC_2916:HG2_Ill_Krunchall_2406:HG2_Ill_SpiralSDKrefine_8412:HG2_Ill_manta_502:HG2_Ill_svaba_2227:HG3_Ill_150bpfermikitraw_2274:HG3_Ill_250bpfermikitraw_2369:HG3_Ill_GATKHCSBGrefine_1191:HG3_Ill_GATKHC_2992:HG3_Ill_Krunchall_2435:HG3_Ill_svaba_2300:HG4_10X_allpass_308:HG4_Ill_150bpfermikitraw_2303:HG4_Ill_250bpfermikitraw_2376:HG4_Ill_GATKHCSBGrefine_1229:HG4_Ill_GATKHC_2909:HG4_Ill_Krunchall_2505:HG4_Ill_svaba_2254;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0335196;ClusterMaxSizeDiff=0.0335196;ClusterMaxEditDist=0.0446927;PBcalls=12;Illcalls=26;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-88;DistBack=80660;DistForward=-86;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=2:44636222-44636327;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1909.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:1/1:0:15:0:7:1/1:0:26:1:18:1/1:0:62:./.:.:.:.:.:.
chr2	44783587	HG2_Ill_GATKHCSBGrefine_1193	TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1405:HG2_Ill_tnscope_190:HG3_10X_allpass_336:HG4_PB_HySA_2748:HG4_Ill_manta_439:HG4_Ill_GATKHCSBGrefine_1231:HG4_10X_allpass_309:HG3_Ill_manta_384:HG3_Ill_GATKHCSBGrefine_1193:HG2_Ill_scalpel_1701:HG2_Ill_GATKHCSBGrefine_1193:HG4_Ill_MetaSV_2577:HG3_Ill_MetaSV_2632:HG2_Ill_breakscan11_242:HG2_Ill_MetaSV_2489:HG2_PB_pbsv_1863:HG4_PB_pbsv_1862:HG3_PB_pbsv_1847:HG4_PB_SVrefine2PBcRDovetail_991:HG4_Ill_SVrefine2DISCOVARDovetail_1302:HG3_PB_SVrefine2Falcon1Dovetail_1151:HG2_PB_SVrefine2PB10Xhap12_1456:HG2_PB_SVrefine2Falcon1plusDovetail_6075;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1193:HG2_Ill_scalpel_1701:HG3_Ill_GATKHCSBGrefine_1193:HG3_Ill_manta_384:HG4_10X_allpass_309:HG4_Ill_GATKHCSBGrefine_1231:HG4_Ill_manta_439:HG4_PB_HySA_2748;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0573248;ClusterMaxSizeDiff=0.0573248;ClusterMaxEditDist=0.257962;PBcalls=8;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-11;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=347;REFWIDENED=2:44783255-44783922;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1910.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:38:0|1:33:2:1:29:0|1:47:0:0:17:0/1:22:24:0/1:25:12:.:.:.
chr2	46433782	HG2_Ill_scalpel_1708	TAAAATGTGTGGCACTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6080:HG4_Ill_Krunchall_2516:HG2_PB_HySA_3463:HG2_PB_assemblyticsPBcR_13008:HG2_PB_pbsv_1875:HG4_PB_pbsv_1873:HG4_PB_HySA_2756:HG4_PB_SVrefine2PBcRDovetail_996:HG4_Ill_svaba_2263:HG4_Ill_scalpel_1650:HG4_Ill_manta_441:HG4_Ill_SVrefine2DISCOVARDovetail_1313:HG4_Ill_GATKHCSBGrefine_1238:HG4_Ill_250bpfermikitraw_2387:HG4_Ill_150bpfermikitraw_2316:HG4_10X_allpass_310:HG2_PB_SVrefine2PBcRplusDovetail_5612:HG2_PB_SVrefine2Falcon2Bionano_701:HG2_Ill_svaba_2234:HG2_Ill_scalpel_1708:HG2_Ill_breakscan11_244:HG2_Ill_SpiralSDKrefine_8419:HG2_Ill_SVrefine2DISCOVARplusDovetail_6526:HG2_Ill_GATKHCSBGrefine_1202:HG2_10X_SVrefine210Xhap12_1415:HG2_PB_assemblyticsfalcon_13420;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1415:HG2_Ill_GATKHCSBGrefine_1202:HG2_Ill_SVrefine2DISCOVARplusDovetail_6526:HG2_Ill_SpiralSDKrefine_8419:HG2_Ill_breakscan11_244:HG2_Ill_scalpel_1708:HG2_Ill_svaba_2234:HG2_PB_SVrefine2Falcon2Bionano_701:HG2_PB_SVrefine2PBcRplusDovetail_5612:HG4_10X_allpass_310:HG4_Ill_150bpfermikitraw_2316:HG4_Ill_250bpfermikitraw_2387:HG4_Ill_GATKHCSBGrefine_1238:HG4_Ill_SVrefine2DISCOVARDovetail_1313:HG4_Ill_manta_441:HG4_Ill_scalpel_1650:HG4_Ill_svaba_2263:HG4_PB_SVrefine2PBcRDovetail_996;NumExactMatchSVs=18;ClusterMaxShiftDist=0.185304;ClusterMaxSizeDiff=0.185304;ClusterMaxEditDist=0.185304;PBcalls=10;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-162;DistBack=43315;DistForward=-152;DistMin=-152;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:46433783-46433959;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1911.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:30:./.:20:4:11:25:0|1:41:0:0:27:0/1:5:28:./.:.:.:.:.:.
chr2	46905010	HG4_Ill_150bpfermikitraw_2321	AAATAAAATAAATAAATAAATATATATATATATATATATATATATATATAT	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_2194:HG4_Ill_scalpel_1653:HG4_Ill_Krunchall_2521:HG4_Ill_GATKHC_2928:HG4_Ill_GATKHCSBGrefine_1241:HG4_Ill_250bpfermikitraw_2392:HG4_Ill_150bpfermikitraw_2321:HG4_10X_allpass_311:HG3_Ill_Krunchall_2448:HG3_Ill_GATKHC_3008:HG3_Ill_250bpfermikitraw_2382:HG3_Ill_150bpfermikitraw_2286:HG2_Ill_scalpel_1711:HG2_Ill_Krunchall_2421:HG2_Ill_GATKHC_2934:HG2_Ill_GATKHCSBGrefine_1205:HG2_Ill_250bpfermikitraw_2394;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2194:HG4_Ill_scalpel_1653:HG4_Ill_Krunchall_2521:HG4_Ill_GATKHC_2928:HG4_Ill_GATKHCSBGrefine_1241:HG4_Ill_250bpfermikitraw_2392:HG4_Ill_150bpfermikitraw_2321:HG4_10X_allpass_311:HG3_Ill_Krunchall_2448:HG3_Ill_GATKHC_3008:HG3_Ill_250bpfermikitraw_2382:HG3_Ill_150bpfermikitraw_2286:HG2_Ill_scalpel_1711:HG2_Ill_Krunchall_2421:HG2_Ill_GATKHC_2934:HG2_Ill_GATKHCSBGrefine_1205:HG2_Ill_250bpfermikitraw_2394;NumExactMatchSVs=17;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=-59;DistForward=-37;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:46905009-46905062;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1912.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:72:1/1:3:43:0:9:1/1:0:14:1:11:1/1:0:36:./.:.:.:.:.:.
chr2	46910132	HG4_Ill_scalpel_1654	ATCAGCTGCCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1418:HG2_PB_assemblyticsfalcon_13426:HG2_PB_assemblyticsPBcR_13014:HG4_Ill_Krunchall_2522:HG3_Ill_Krunchall_2449:HG2_Ill_Krunchall_2422:HG4_Ill_Spiral_138:HG2_Ill_Spiral_112:HG3_PB_pbsv_1856:HG2_PB_pbsv_1876:HG4_PB_HySA_2758:HG4_Ill_MetaSV_2579:HG3_Ill_MetaSV_2634:HG2_PB_HySA_3469:HG2_Ill_tnscope_191:HG2_Ill_MetaSV_2492:HG4_PB_pbsv_1874:HG4_PB_SVrefine2PBcRDovetail_998:HG4_Ill_scalpel_1654:HG4_Ill_manta_442:HG4_Ill_SVrefine2DISCOVARDovetail_1316:HG4_Ill_GATKHCSBGrefine_1242:HG3_PB_SVrefine2PBcRDovetail_1007:HG3_PB_SVrefine2Falcon1Dovetail_1160:HG3_Ill_scalpel_1832:HG3_Ill_manta_386:HG3_10X_allpass_338:HG2_PB_SVrefine2PBcRplusDovetail_5613:HG2_PB_SVrefine2PB10Xhap12_1465:HG2_PB_SVrefine2Falcon2Bionano_702:HG2_PB_SVrefine2Falcon1plusDovetail_6081:HG2_Ill_scalpel_1712:HG2_Ill_manta_505:HG2_Ill_breakscan11_245:HG2_Ill_SVrefine2DISCOVARplusDovetail_6529:HG2_Ill_GATKHCSBGrefine_1206;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1418:HG4_PB_pbsv_1874:HG4_PB_SVrefine2PBcRDovetail_998:HG4_Ill_scalpel_1654:HG4_Ill_manta_442:HG4_Ill_SVrefine2DISCOVARDovetail_1316:HG4_Ill_GATKHCSBGrefine_1242:HG3_PB_SVrefine2PBcRDovetail_1007:HG3_PB_SVrefine2Falcon1Dovetail_1160:HG3_Ill_scalpel_1832:HG3_Ill_manta_386:HG3_10X_allpass_338:HG2_PB_SVrefine2PBcRplusDovetail_5613:HG2_PB_SVrefine2PB10Xhap12_1465:HG2_PB_SVrefine2Falcon2Bionano_702:HG2_PB_SVrefine2Falcon1plusDovetail_6081:HG2_Ill_scalpel_1712:HG2_Ill_manta_505:HG2_Ill_breakscan11_245:HG2_Ill_SVrefine2DISCOVARplusDovetail_6529:HG2_Ill_GATKHCSBGrefine_1206;NumExactMatchSVs=21;ClusterMaxShiftDist=0.113452;ClusterMaxSizeDiff=0.113452;ClusterMaxEditDist=0.113452;PBcalls=14;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=5079;DistForward=-299;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=2:46910133-46910466;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1913.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:76:1/1:1:42:1:27:1/1:0:19:0:13:1/1:0:34:0/1:2:14:.:.:.
chr2	47654056	HG2_Ill_SpiralSDKrefine_8429	GATGTTTGTTTATAGCCCCATTGATGGGGCTATAAACTTGGCAGCAAATTGTTTTCCCACTAATTTGGCATTTTCCATAA	G	20	PASS	ClusterIDs=HG2_PB_HySA_3483:HG3_PB_pbsv_1863:HG2_PB_pbsv_1884:HG3_Ill_svaba_2322:HG3_PB_HySA_2807:HG3_Ill_manta_388:HG3_Ill_GATKHCSBGrefine_1206:HG3_Ill_250bpfermikitraw_2391:HG2_Ill_svaba_2244:HG2_Ill_manta_507:HG2_Ill_SpiralSDKrefine_8429:HG2_Ill_GATKHCSBGrefine_1210:HG2_Ill_250bpfermikitraw_2404:HG2_10X_SVrefine210Xhap12_1421;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1421:HG2_Ill_250bpfermikitraw_2404:HG2_Ill_GATKHCSBGrefine_1210:HG2_Ill_SpiralSDKrefine_8429:HG2_Ill_manta_507:HG2_Ill_svaba_2244:HG3_Ill_250bpfermikitraw_2391:HG3_Ill_GATKHCSBGrefine_1206:HG3_Ill_manta_388:HG3_Ill_svaba_2322;NumExactMatchSVs=10;ClusterMaxShiftDist=0.13245;ClusterMaxSizeDiff=0.119205;ClusterMaxEditDist=0.225166;PBcalls=4;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-79;DistBack=43309;DistForward=34740;DistMin=34740;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=80;REFWIDENED=2:47654057-47654215;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1914.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:0|1:21:2:1:19:1|0:0:12:24:1:0/1:28:22:./.:.:.:.:.:.
chr2	47971728	HG3_Ill_svaba_2325	AATATATATATATATATATATATATATATATATATATATATATATATATAT	A	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_2406:HG3_Ill_GATKHC_3018:HG3_Ill_GATKHCSBGrefine_1207:HG2_Ill_GATKHC_2947:HG2_Ill_GATKHCSBGrefine_1211:HG3_Ill_Spiral_1921:HG3_Ill_svaba_2325:HG3_Ill_scalpel_1838:HG3_Ill_150bpfermikitraw_2299:HG2_Ill_svaba_2247:HG2_Ill_scalpel_1719:HG2_Ill_breakscan11_247:HG2_Ill_SpiralSDKrefine_8430;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2406:HG3_Ill_svaba_2325:HG3_Ill_scalpel_1838:HG3_Ill_150bpfermikitraw_2299:HG2_Ill_svaba_2247:HG2_Ill_scalpel_1719:HG2_Ill_breakscan11_247:HG2_Ill_SpiralSDKrefine_8430;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.0392157;PBcalls=0;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-50;DistBack=19203;DistForward=13992;DistMin=13992;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=0/0;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:47971729-47971793;PctSeqSimilarity=0.9901;PctSizeSimilarity=0.98;PctRecOverlap=0.9804;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1915.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:22:./.:6:16:21:3:./.:1:21:4:1:0/1:5:5:./.:.:.:.:.:.
chr2	48990527	HG2_PB_SVrefine2Falcon2Bionano_707	GTATAGGAATGCTTGTGATTTTTGCACAGTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATTAGCTTAAAGGGATTTTGGGCTGAGATGATGGGGTTTTCTAAATATGCAATGATGTCATCTGCAAACAGAGACAATTTGACTTCCTCTTTTCCTAATTGAATACTCTTTATTTCTTTCTCTTGCCTGATTGCCCTGGCCTGAATTTCCAATACTGTGTTGAATAGGAGTGGTGAGAGAGGGCATCCTTTTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAAATAGCTCTTATTATTTTGAGATACATTCCATAAATACCTACTTATTGAGAGTTTTTAGCATGAAAGGCAATTTTGTTGAAGGCCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCATTGGTTCTGTTTATGTGATGGATTACATTTATTGATTTGTATATGTTGAACCAGGCTTACATCCCAGGGATGAAGGTGACTTGATCATGATGCACAAGCTTTTTGATGTGCCGCTGGATTTGGCTTACCAGTATTTTATTGAGGATTTTTGCATTGATGTTCTTCAGGGATATTGGCCTAAAAT	TG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2497:HG4_PB_assemblyticsfalcon_13276:HG3_Ill_GATKHCSBGrefine_1212:HG2_Ill_GATKHCSBGrefine_1217:HG2_Ill_tnscope_193:HG3_PB_assemblyticsfalcon_13509:HG3_PB_SVrefine2PBcRDovetail_1012:HG3_PB_SVrefine2Falcon1Dovetail_1168:HG3_Ill_manta_390:HG3_Ill_SVrefine2DISCOVARDovetail_1304:HG2_PB_SVrefine2Falcon2Bionano_707:HG2_PB_SVrefine2Falcon1plusDovetail_6089:HG2_Ill_manta_508:HG2_Ill_SVrefine2DISCOVARplusDovetail_6539:HG3_PB_HySA_2820:HG3_Ill_Spiral_1928:HG2_Ill_Spiral_113:HG3_PB_pbsv_1870:HG2_PB_pbsv_1893:HG3_Ill_MetaSV_2636:HG2_PB_assemblyticsfalcon_13450:HG3_10X_allpass_341:HG2_PB_HySA_3499:HG2_10X_allpass_276:HG3_Ill_Krunchall_2468:HG2_Ill_Krunchall_2441;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6539:HG2_Ill_manta_508:HG2_PB_SVrefine2Falcon1plusDovetail_6089:HG2_PB_SVrefine2Falcon2Bionano_707:HG3_Ill_SVrefine2DISCOVARDovetail_1304:HG3_Ill_manta_390:HG3_PB_SVrefine2Falcon1Dovetail_1168:HG3_PB_SVrefine2PBcRDovetail_1012:HG3_PB_assemblyticsfalcon_13509;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0348101;ClusterMaxSizeDiff=0.0348101;ClusterMaxEditDist=0.0715421;PBcalls=11;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-636;DistBack=-637;DistForward=-589;DistMin=-637;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:48990527-48991164;PctSeqSimilarity=1;PctSizeSimilarity=0.9984;PctRecOverlap=1;SizeDiff=-1;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1916.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:35:0|1:38:1:1:31:1|0:0:26:57:1:0/1:55:19:0/1:48:13:.:.:.
chr2	49354961	HG2_Ill_GATKHCSBGrefine_1220	TCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_13514:HG2_Ill_GATKHC_2969:HG2_Ill_GATKHCSBGrefine_1221:HG2_PB_HySA_3505:HG2_PB_assemblyticsPBcR_13042:HG3_Ill_GATKHC_3032:HG2_Ill_GATKHC_2968:HG2_Ill_GATKHCSBGrefine_1220:HG2_PB_pbsv_1896:HG4_PB_pbsv_1892;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1220:HG2_Ill_GATKHC_2968:HG3_Ill_GATKHC_3032;NumExactMatchSVs=3;ClusterMaxShiftDist=0.333333;ClusterMaxSizeDiff=0.333333;ClusterMaxEditDist=0.333333;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-76;DistBack=42;DistForward=-70;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:49354960-49355038;PctSeqSimilarity=0.9815;PctSizeSimilarity=1;PctRecOverlap=0.961;SizeDiff=0;StartDistance=3;EndDistance=3;GTMatch=1;TruScore=98;MatchId=1917.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:9:36:1/1:2:9:2:11:./.:1:12:6:4:0/1:5:8:./.:.:.:.:.:.
chr2	49532029	HG2_10X_SVrefine210Xhap12_1433	AGAACAGAACAGATCCCTCAGAAATAACTCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAACGTTAGATCTGAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGATTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAAAAGGCAACCTACAAAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAATAAACAACCCCATCAAAAAGTGGGCGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAGAAAATGTTCACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCCTTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAGTGGATTATAAATCATGCTGCTATCAAGACACATGCACATGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTAGAACCAAGCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATATTATGCAGCCGTAAAATACGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAATTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAAATGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCTTTAGAAGATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAACAAAGAAAGAAATGGTGAGAGGCTCATGGATATGACCTCAAATCTGAAGTGAAGGCAGAGTTGGAATGGAGTTTAGAGCAAATAGAAATATTGGAGTAATTCGTGCTCATGGCCAGCTCCTTCAAAGCGCTGAAGTGTATAGAATGGCTGCAAGGAAAGACCTGAGCTTCTCTGTCTTGTGATGAAAGTGAGTTTTGTTTTTCTAAAACAAACCAGTTCTCTGCCCAAATTTACATTTTTATAGATGCACATAGATTTTCAACCTCTAAAATATTTTGGTTAAGATGTTTTCAAAATAATAAATCTTCAAAATAAAAAAAAAAAAGAGAACAAATGGCTGGACCAATTTGGCTAGATAAATGGTTAAGTAATCCACCCATTTTTTGTTCTAATGAGTGGGATGCGTAAAAGATATAAACTTAGTATAATATCAAAGACACCCCACATTAAAAGTATATCTTTAAAAAGTATAGCTATTACATTTTCATTTACATTTAGTTCAGAACTCGTATCCAGGAGTAGTGGGGTTAACTGCTTATGATAGGAAGCTTACAGTCTTTCTGTGCAGTATTTATTTCTTCATAGTTTTCCTACCTGTGCAGGAGATTTCCTCCTTTCTTCTGTGTAAATCCCTTTTCACTTGTGTGCAAACATGAACTGTTCAGCACAATGTGCTAATTAAAACACCCATTTTGCTTGAGTGGTCTTCGTCAAAGGCTTAAAGAAAGCTTGTGTTTTGCCTGGATCGCCTTGAGATTACTGTGAGAAACCTATCAGGATTAGTTGAGAGACATATTCTAAGTGTCTACAATTTGTCAGGCACTGAGGTTACCCAGATGATTAAAGGACAGTTTGTACTCTCAAGAACTTCATGGCCCAGGAGGAAGCAGCGTGTAAATAAATGATCAAAGAGGATATGTGACTCATAATGTACAGGACACTGGGAGCACAAACAGAGGGACAGCTTTTTATTCATTCACATCTTTATTGATCATCAAGTATGGGATAGACAGGCACAGGGTGGTGAGGAAAAGTGACAGTAAAAATAAAAGATCAAAGGTAAGAAAGGCATATTTTCTGCCTTCTTTTTCTTTGTAAAATTGTTCCTTTTTCCAGGAAGAAAATAGTAAAAGAAATCTTTTGATCTCTGTGTTCCACCATATAAGCATTTTTTAGATTATCCCTTTTCTAACTGCTATTTGATTCTGAATTTATGTGTACACTCAATTAAACCAGACAATAAAAAAAAAACCCTAACAATTTACCTGAACATTTAAGGCTACTATAAACATTAATTTCCCTGGCCAAATTAATAAAGAGGGGGCTCTAATTAATAGAGTTGCTGTATATATGCAAAATATAATTTGGTAATCCACTTTCTGTTAAATATTATAATACAATCAACTTAACTTTAAATCTCTCTTAAAATTACTTTATTCTATTTTTGCTAAATTACAATGTTTTTCAATATCTTGCAGGGTCTTAGAATCTTTACCAGATACAAAAATAATAACTTCACAATGGAAATGTGGACTTATGGTGAGTTGTGTATTTTTCGAAAAGAATTGTATCCTAGGCAGAGCCTTTATATAGCAAGTTTTTCCTCTTCAAATTTGTTTTTAATTCAGTCTCATAGTAGTCCTATAAGGTTAAAACATTATTACAGTATTATTTTTCTCATTTTATGGATAGATCAACGGACCACAAAAAGATTAAGTGACTTGCCTGGGGTTATGTAAAATAACTTTACTGGCAAAGCCAGGACTATATCTCACGTTTCCCGAGTCTCAGTCTTTGAGCCTAATCAGAGAATTTCTACTTATTTTACGTACAATTTATCTAACTTTTAATTGATTATTTGACAAATTTCTATCCTTTAAATATTTTAATATCATTCCTATTTACCTATTAGTTGGGAAACTTCCTAGTTTGAGGTAATCGATCATTGAATATCTATTAGGTATGGGATGGCCTACTACAAAACAGGCAGAAGAAATGCTTTTCTCAAGAAACTTGGAATGTAAATATTGATGTATAAGATCACTTTCACATGGGTTAGACTAATTATAATGCTTAGCATGAAACATGTTAGTTCTTGTAACCAAGGAAAGTATTATGGTCAGAAATCACTGTACAGTTATTCCATCTTTGGTCCTAGAGTTGATGTGATATTGGCAAGAGGTTAGACAAATAGACCAAAGGAACAGAATAAAGAGTTCAAAGATATACTCACATGTCCACAGTCATCTGATACATAGCAAATATGCCATTACAATTCAGGGAAGAAAGAATGGTCTTTTCCGTAAATGGTGCTTAGTTACATGGTTACTCATATGTGAAATAAATATAACTTGACCTCTACCTCATACCATATGAAGAGTAATTTAGGATTAACCATGGACCTAAGTGTGAAAGGCAAAGGCATAAAGCATCTAGATGAACATAGGAGAATGGCTTGGTGTCTTCAGGGAGGCCCAGTCTAATCAAACAGGTCCTTAAAAGTGGAAAAAAAAGAAAGAAGAGTGGTCAGAAAGATGAGGCATGAGATGGTCTCAATCTACCACTACTGGCTTTGAAGATGGAAGAAGGGCTTTGAGCCAATGACTATGGCAGCTTGCAAGCTGGAAAAGGCAAGGAAACAGATTCTTATAATATCCAGAAAGCAGTATAGCCCCAGTGACGGTTTTATTTTAACAAACTGAGACTTGTGTCAGACTTCTAACCTATAGAATTGTAAAGTTACACATGTGTGATATTTGAAACCACTAAGTTTGTGATAATTTATTATGGCAGCAATACAAAATTTAAAAAAAAAGGAAATTTAAAAACAAAACATTCCTATTCCTCCTTTATGAAGAAGCTTAAAAGTGACACTCACCTGCTTCCTTTAAACCTAGTTACTCTACCCCTGGAGAGCTCAGAGAACTCTATTTTACTACCATTCATCTTGTTTTACCTTATATTTCTACTGGATTGTGGATTCTCTGTAGGCATCTTTACATCTTCCATTGTATATATGCCAGGCACCGTACATGTGTTCACTTTATATACTAGGTGCTCTATGCATCTTTGGTAAATTACTTTAAATTGAACCATTTATTTGCATGAGGGGCAGCAACCAGGAAAGACAAGATTCCACTAATGTGTTCTCTTAGCCTGCTTAGCAAGCTTTCCACTGCAAAGATACATTAATGCTAGGGTTCTGAATAATGAAGCTGAGGTTGTTTAAAACAGCAGGCTGGCATCAGATGAAACATTTCCATATCATTCTACATTAAATAAAACATTTACCATTTCATGCTTTCTTTTCTGGTAATTTTGCCTTGTCCTTCACGTTAGTGATTTGTTCCACATGGCCACTCATTTAAGATAACAGCAGGCCAAGAGGTGTGACAAATGGAGACAGGGCCATACCTGATCACCAGGATTCCATTACGCTTCCTTGAGTTTAGAACTAGTAAAACTGTCAGTATCTTAAAACAAAGGAACTGTGCTTGAGTCTACATATTAGGAATTCAGTGACTGCAGTAGCAGTGATCGCATTATATAGCAAATGGACAGACATGGCTATAAAGGGAGCCTACAGTCAAAATAAATGAACTGTTTTTCTGTGTCCAGTCAAACAACAAATATTTTCCAGTACCTATTATATGTGTAGCCCTGTGATAAGTACTGCAAAGGGATATGAGGGGGAGAAGATAGATGCTTTATATTTCAAAAATATTTAACAGTGGGGAAAGAAAAGATTAGGAAAAGTAACACAAGGGTGAAACAAGTATATGCAATAAAAATTCAGTGGAGCGAGGGAGCATTTCACCAGGAAGGCTTTGGAGAATTGATAGGAATAAAGGTAGTAGTAACATTTAAGCATTAAGTTGGACAGCTGAAGATGTATGGTGTTGGTATGTGCGGGGTACATTCTAGGAAACACTCTCAGTCCCATTTGTCTCAAACAGGGTTTGTCAACCTCTGCTCTACTGACCTCCCAGTCTGTGTAGTTCTCTGTTGAGGTGGGGGGGGGGCATTGTAGGATGTTTAGCAGCATCTTTTGCCCCTACCAACTAGATGCCAGTTACTTTACCTCCTCTTGGAGGTATGACAACCAAATGTCCCCTGAGAAGCAAAATTGTCCCCAGTTAAGAACCACTGTCGTGGAGTAAAAGTTCAGAGAGAGGAGACATGAGAGTTACATGCCATGTCAAAGAGTTGGGAATTTCATTCCAAAGGTAATGAGGAACCACTGAAAACATTTATGCTGGAGAATGGCAAGTTAAAAAATTGTTTGAACGCAATTTATGTGATGGAAGCACCCGAGAAAAACTGGAGGGAGGTGTTGTAGGGAAAGGGAAGAACAACTTAAAAGCTATCACAATTGTCCAAGCATAAAATGAGGAGGTTTGGTGGCAGCAGAACTAGAGAGCACTCGGTGGCTATAGGTATTCTTTTTTGTATTTTTAAATTTTATTTTAAATTCAGGATGTACATGTGCATGTTTGTTACATGAGTATATTGCATACTGGTGGGGATCAGTCCTGTAGTATACCCATTACCCAAATAGTGAACATTGCACTTGATAGGTGATTTTTCAACCCTCAACCCCTTCTTCCATTCTCCCCACTGTTGGAGTCCCCAAGGTCTATTATTCTCCTCTGTATGTCCATGTGTACTCGTTGTTTAGCTCCCACTTATAAGTGACTGCGTGAGGTATTTAATTTTGATTTTCTGTTTTTGAATTAGTTCCCTTAGGATAATTGCCTACAGCTTCATGCTGCAAAGAACATGATTCATTCTTTTCATGGCTGCGTAGTATTCCATGGTGTATATCTACCACATTTTCTTTATCCAGTCAACCATTGATGGAAACTTAGGTTGGTTCCATGACTTTGCTATTACAAATAGTGCTGTGATGAACATATGAGTGCAGATGTATTTTTTATATAATTTTTTTTCCTTTGGTAGGTACTCAGTAGTAGGATTGCTGGGTTGAATGTTCTATTTTTAGTTATTTGAGAAATCTCCACACTGTTTTCTATGGAGGTTGAACGAATTTACATCCCCATCAACAGTGTCTAAGTGTTTTTCCCCACATCCTGGTCCTGTGTGTAAGCTTAGATGGAGAAAGGAACAGCCACAAGCAGCAGCTAAAGCAATCTGTAGCTTGGGAACCTTGGCTAGGAACGATTCACAGACTGTTGGTTAGGAAAAAGCAGTGTAGCAGCATAGAAGCAGGCATGTGGTGCCAATCTTCTGAGACCATCTTTCAGGCCCATGGAGAGAAACTAGCAGCAACTTCCAAGCCACCAGAAGCCTCTAAAACAATACATTTTCACTTTCACTCCATTCTGTCTATAAATTTTAAATTCATATCCAATTATGGTAAAAATATTTTAGTAAGTTTTTTTAAATAGTTAAATAGCACTGAAAGGAAAAAGAGGGGAATATATGCTTGGTTCTCCATTCTGTGGCCATTTTTGAAGTTCACTGAACCCAGTTTGGAATTTTGGAAAACCTGTTATTGTGGCTGAGCTCCATGGAAGGTCACTTCCTTCATGTTTTAAAAGTGACACTGAAACACAATAGGTAATTTTCCACGTTTAGGCTACAATGATATAATTAATTAATAAGATTTCCTCAACTGATTAAAAGTTCCATAAGGGCAATTACCACATCATATATTGTTATTCTCTACGTCTTTGCGCAGTAAAATAGGGGCAAATAACAGCTTACGCTTGTCACCTGCCTGAAGTTAAATTCACTGTTACTCATGAGCAAAATGACTTGTGAAAAGAATGAAGTTCTTGATATCACAGGTTGAGGAAATATTCTACCCAAGAGGCATGTGGTATATTACCTTGGAGCACAGGATCAGGAATCAGACAAACTGTGTTCAATTCCTGCAATCACCACTTCTATGTGTATGAACTTGAGAGATCTGTTTACTCTCAGTGCCCCAGACTGACACCTCACACGGCCGGGTACTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGGCAGCAGCATTTGTTGTTCACCAATATCTGTTGTTCTGCAGCCTCTGCTGCTGATACCCAGGCAAACAGGATCTGGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGACTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAACCCCATCTATATGTCACCATCATCAAAGACCAAAGGTAGATAAAACCACAAAGATGGGGAAAAAACAGAGCAGAAAAACTGGAAACTCTAAAAATCAGAGCACCTCTCCTCCTCCAAAGGAACACAGCTCCTCACCAGCAATGGAGCAAAGCTGGACGGAGAATGACTTTGACAAGATGAGAGAAGAAGTCTTCAGATGATCAAACTACTCCGAGCTAAAGGAGGAAGTTCAAACCCATGGCAAAGAAGTTGAAAACCTTGAAAAAAATTAGACGAATGGCTAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGGACCTGATGGAGCTCAAAACCATGGCAAGAGAACTACGTGACAAATGTACAAGCCTCAGTAGCTGATTCGATCAACTGGAAGAAAGGGTATCAATGATGGAAGATGAAATGAATGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAACAAAGTCTCCAAGAAAGATGGGACTATGTGAAAAGACCAAATCTATGTCTGACTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATCATCCAGGAGAACTTCCCCCAATCTAGCAATGCAGGTCAACATTCAACTTCAGGAAATACAGAGAATACCACAAAGATACTCCTCAAGAAGAACAACTCCAAGATACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCAGCAAAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATGTTCAACATTCTTAAAGAAAATAATTTTCAACCCAGCATTTCACATCCAGCCAAACTAGGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCAACAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCAGTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATCAAGGCTAGGAAGAAACTGCATCAACTAACGAGCAAAATAACCAGTTAACATCATAATGACAGGATCAAATTCACACATAACAATACTAACCTTAAATATAAATGGGCTAAATGCTACAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTAAGCTATATTCAGGAAACCCATCTCATGTGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCGGATAAAACAGACTTTAAATCAACAAAGATCAGAAGAGACAAAGAAGGTCATTACATAATGGTAAAGGGAACAATTGAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTTAGAGACATACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAATGAGACAGAAAGTTAACAGGGATATTCAGGAATTGAACTAAACTCTGCACCAAGCGGACCTAATAGACATCTACAGAACCCTCCACCCCAAATTAACAGAATATACATTCTTTTCAGCACCACACCACACCTATTCCAAATTTGACCACATAGTTGGAAGTAAAGCGATCCTCAGCAAATGTAAAAGAACAGAAACTATAACAAACTATCTCTCAGACTACAGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACCACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAATGAGAACAAAGACACAACATACCAGAATCTGTGGGACACATTCAGAGCAGTGTGTAGAGGGAAATTTATAGCACTACATGCCCACAAGAGAAAGCAGGAAAGATCTAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAACATCAGAGCAGAACTGAAAGAGATAGAGACACAAAGAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGGTCAACAAAATTGATAGACCACTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGATGCAATAAAAATGATAAAGGGGATATCACCACTAATCCCACAGAAATACCAACTACCATCAGAGAATACTATAAACACTTCTATGCAAATAAACTAGAAAATCTAGAAGAAATAGATAAATTCCTAGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCACTGAATAGATCAGTAACAGGCTCTGAAATTGAGGCAATAATTAATAGCTTACCAACCAAAAAAAATCCAGGACCAGACGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTTCTTCTGAAACTATTCCAATCAATAGAAAAGGAAGGAATCCTCCCTAACTCATTTTATGTAGCCAGCATCATTCTGATACCAAAACCTGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATGCCTGATGAACATCGATGCAAAAATCCTCAATAAAATACTGGTAAACCGACTCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACACAAATCAATAAACGTAATCTAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATTGATGCAGAAAAGGCCTTTGACAAAATTCAATAACCCTTTATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACATATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGACAAAAACTGGAAGCATTCCCTTTGAGAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATCATCCCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGACAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAAGAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAGTATCATGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTAAAGTTCATATGGAACCAAAAAAGAGCCTGCATTGCCAAGTCAATCCTAAGCCAATAGAACAAAGCTGGAGGCATCAGGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGAGATATAGACCAATG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1433:HG2_PB_pbsv_1897:HG4_10X_allpass_314:HG2_10X_allpass_277:HG4_PB_pbsv_1893:HG2_PB_SVrefine2PBcRplusDovetail_5621;NumClusterSVs=6;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1433:HG2_PB_SVrefine2PBcRplusDovetail_5621;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00220099;ClusterMaxSizeDiff=0.00220099;ClusterMaxEditDist=0.00555262;PBcalls=3;Illcalls=0;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-11345;DistBack=65710;DistForward=16172;DistMin=16172;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1352;REFWIDENED=2:49532030-49544726;PctSeqSimilarity=0.9776;PctSizeSimilarity=0.9996;PctRecOverlap=0.9349;SizeDiff=-4;StartDistance=-735;EndDistance=-739;GTMatch=0;TruScore=97;MatchId=1918.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:73:39:./.:19:14:40:8:0/0:63:0:29:0:0/0:87:0:0/1:446:190:11587:.:.
chr2	49561482	HG4_Ill_svaba_2288	TAGTTCAAATATGTCTGAGGCTCTTTTTTTCAGAATGACAAGTGCTCATGGTCTAAAATGCAGTCAGTCTGTGTCTCCCAGATGGTTTAGCAATCAGCAAGTTGCTGTGCTGCATTTTGAGGGTAAAATAAAGTCAGGTGGGGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1434:HG4_PB_pbsv_1894:HG4_PB_assemblyticsfalcon_13281:HG4_Ill_Krunchall_2544:HG2_Ill_Krunchall_2449:HG4_PB_SVrefine2PBcRDovetail_1004:HG4_Ill_svaba_2288:HG4_Ill_manta_446:HG4_Ill_GATKHCSBGrefine_1253:HG4_Ill_Cortex_1790:HG4_CG_vcfBeta_1208:HG4_10X_allpass_315:HG2_PB_pbsv_1898:HG2_PB_SVrefine2PB10Xhap12_1474:HG2_Ill_svaba_2264:HG2_Ill_manta_510:HG2_Ill_breakscan11_249:HG2_Ill_SpiralSDKrefine_8439:HG2_Ill_GATKHCSBGrefine_1222:HG2_Ill_Cortex_4275:HG2_CG_vcfBeta_1100:HG2_10X_allpass_278;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1434:HG4_PB_SVrefine2PBcRDovetail_1004:HG4_Ill_svaba_2288:HG4_Ill_manta_446:HG4_Ill_GATKHCSBGrefine_1253:HG4_Ill_Cortex_1790:HG4_CG_vcfBeta_1208:HG4_10X_allpass_315:HG2_PB_pbsv_1898:HG2_PB_SVrefine2PB10Xhap12_1474:HG2_Ill_svaba_2264:HG2_Ill_manta_510:HG2_Ill_breakscan11_249:HG2_Ill_SpiralSDKrefine_8439:HG2_Ill_GATKHCSBGrefine_1222:HG2_Ill_Cortex_4275:HG2_CG_vcfBeta_1100:HG2_10X_allpass_278;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0138408;ClusterMaxSizeDiff=0.0138408;ClusterMaxEditDist=0.0138889;PBcalls=5;Illcalls=12;TenXcalls=3;CGcalls=2;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=2;HG2count=12;HG3count=0;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-144;DistBack=1934;DistForward=-143;DistMin=-143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:49561483-49561628;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1919.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:18:./.:27:7:7:10:0|1:46:0:0:18:0/1:47:21:./.:.:.:.:.:.
chr2	49612882	HG2_PB_SVrefine2PBcRplusDovetail_5622	ACAATATTTTTACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCTGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_250:HG4_PB_HySA_2776:HG2_PB_assemblyticsfalcon_13457:HG2_Ill_Krunchall_2450:HG3_PB_assemblyticsfalcon_13516:HG2_PB_assemblyticsPBcR_13044:HG4_Ill_Spiral_140:HG2_PB_HySA_3509:HG4_PB_assemblyticsfalcon_13283:HG4_PB_pbsv_1896:HG3_PB_pbsv_1873:HG4_Ill_MetaSV_2585:HG3_Ill_MetaSV_2638:HG2_Ill_tnscope_194:HG4_PB_SVrefine2PBcRDovetail_1005:HG4_Ill_scalpel_1670:HG4_Ill_manta_447:HG4_Ill_SVrefine2DISCOVARDovetail_1335:HG4_Ill_GATKHCSBGrefine_1254:HG4_10X_allpass_316:HG3_PB_SVrefine2Falcon1Dovetail_1170:HG3_Ill_scalpel_1850:HG3_Ill_manta_392:HG3_Ill_SVrefine2DISCOVARDovetail_1306:HG3_Ill_GATKHCSBGrefine_1214:HG3_10X_allpass_342:HG2_PB_pbsv_1900:HG2_PB_SVrefine2PBcRplusDovetail_5622:HG2_PB_SVrefine2PB10Xhap12_1475:HG2_PB_SVrefine2Falcon2Bionano_709:HG2_PB_SVrefine2Falcon1plusDovetail_6091:HG2_Ill_scalpel_1732:HG2_Ill_manta_511:HG2_Ill_SVrefine2DISCOVARplusDovetail_6542:HG2_Ill_GATKHCSBGrefine_1223:HG2_10X_allpass_279:HG2_10X_SVrefine210Xhap12_1435;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1435:HG2_10X_allpass_279:HG2_Ill_GATKHCSBGrefine_1223:HG2_Ill_SVrefine2DISCOVARplusDovetail_6542:HG2_Ill_manta_511:HG2_Ill_scalpel_1732:HG2_PB_SVrefine2Falcon1plusDovetail_6091:HG2_PB_SVrefine2Falcon2Bionano_709:HG2_PB_SVrefine2PB10Xhap12_1475:HG2_PB_SVrefine2PBcRplusDovetail_5622:HG2_PB_pbsv_1900:HG3_10X_allpass_342:HG3_Ill_GATKHCSBGrefine_1214:HG3_Ill_SVrefine2DISCOVARDovetail_1306:HG3_Ill_manta_392:HG3_Ill_scalpel_1850:HG3_PB_SVrefine2Falcon1Dovetail_1170:HG4_10X_allpass_316:HG4_Ill_GATKHCSBGrefine_1254:HG4_Ill_SVrefine2DISCOVARDovetail_1335:HG4_Ill_manta_447:HG4_Ill_scalpel_1670:HG4_PB_SVrefine2PBcRDovetail_1005;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0979463;ClusterMaxSizeDiff=0.0979463;ClusterMaxEditDist=0.0979463;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-548;DistForward=-308;DistMin=-548;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:49612883-49613221;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1920.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:63:1/1:5:21:0:11:1/1:0:18:0:22:1/1:0:41:0/1:3:16:.:.:.
chr2	51926584	HG2_Ill_SVrefine2DISCOVARplusDovetail_6550	AACAATGATTAAACAATGCCCCACTTAATGCAGGTTGAGAAATAAGTGAAACTATGACATGGAAAAATATTACAATAAGCGAAAAATATTACAATAAAGGAAAAAATAATGGAAGAATATCAGTATTTGATGCTATTATACGTGACCATATTGTTTAGCAAACTACTTCAAAAATGAAATTAGGAATTTCAGAGAATCATTTTATTCTCATATCAGAATGCTTGGAAAAGTGAGGGCTAAATGTATTTGTTATTTGACTGTGTACATTATGCCCATGGAATAGCATTTTGGAAGACCCAACATTAAGCTAGCTTTACATAACAATGAGTATGTCATGTTAACTTATGATACACTTTAATCCTGGCTTGACTCTGGTAGCTGTGTGACTATAATCTTTCAGGCCTCCATTTACTTATCCAGAAAGTGGAAATAATAATATGTAATTAATAGATGCCTGGTGAATATTAAATTCATTAATATTTGTCAACTATTTTTCACAGACTTTTCATTTAGTTAAGTACACAATAATAAGTAAGCACTCATATATGAATGTGTGTACATATTTATCGTAAACAGATCCTCAGTAATTAGTGTAGAAATAAATGTTCTAGACAATCCAAAGTTATTTAAAGTTTTTCAGAAAGCTACCCTTCTATCATCTGGGGTAATTTTTTTTGTCATTTTGGCAAATATGTAGAGAATATATGTGAGTCTTCCTATTAGTCTGAAGTAAGCAAAACTATAAAGGCACATTTATCGAGGTGGAATGTGAAAAACAACAATCATTTTAACGTAAATCTATGATACTTTGGTCTCTTCCAGTGTCCAGGTAACTTATGCCACAACTTTCTTCTATCTTTGTTAATAATACAGTGTGTTTTATACCTGTGGGCACTAACATTTTGTTACTATTTGTAGTAATGCTACTGCATTACTGATATGAGAATAAAATGATTCTCTGAAATTCCTAATTTCATTTTTGAAGTAATTTGCTAAACAATATGGTCACGTATAATAGCATCAAATATTGATATTCTTCCATTATTTTTTCCTTTATTGTAATATTTTTCACTTATTGTAATATTTTTCCATGTCATAGTTTCACTTATTTCTCAACATACTATGTATCCATGAATGTCCTGAAGGGAAAAAAAAATCTCATATATACCTAACTGATGTGCTTG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_1902:HG4_Ill_Krunchall_2558:HG2_Ill_Krunchall_2462:HG2_PB_assemblyticsfalcon_13470:HG4_PB_SVrefine2PBcRDovetail_1007:HG4_Ill_MetaSV_2588:HG4_Ill_GATKHCSBGrefine_1259:HG4_10X_allpass_317:HG2_PB_pbsv_1905:HG2_PB_SVrefine2PB10Xhap12_1479:HG2_PB_SVrefine2Falcon2Bionano_713:HG2_PB_SVrefine2Falcon1plusDovetail_6095:HG2_Ill_breakscan11_251:HG2_Ill_SpiralSDKrefine_8444:HG2_Ill_SVrefine2DISCOVARplusDovetail_6550:HG2_Ill_MetaSV_2503:HG2_Ill_GATKHCSBGrefine_1229:HG2_10X_allpass_280:HG2_10X_SVrefine210Xhap12_1439:HG2_Ill_tnscope_195;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1439:HG2_10X_allpass_280:HG2_Ill_GATKHCSBGrefine_1229:HG2_Ill_MetaSV_2503:HG2_Ill_SVrefine2DISCOVARplusDovetail_6550:HG2_Ill_SpiralSDKrefine_8444:HG2_Ill_breakscan11_251:HG2_PB_SVrefine2Falcon1plusDovetail_6095:HG2_PB_SVrefine2Falcon2Bionano_713:HG2_PB_SVrefine2PB10Xhap12_1479:HG2_PB_pbsv_1905:HG4_10X_allpass_317:HG4_Ill_GATKHCSBGrefine_1259:HG4_Ill_MetaSV_2588:HG4_PB_SVrefine2PBcRDovetail_1007;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00422833;ClusterMaxSizeDiff=0.00422833;ClusterMaxEditDist=0.00845666;PBcalls=7;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1183;DistBack=7891;DistForward=-1181;DistMin=-1181;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=2:51926585-51927770;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1921.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:30:./.:8:7:13:8:0|1:63:0:0:26:0/1:43:17:0/1:102:40:1357:.:.
chr2	52825752	HG3_Ill_svaba_2358	CCAGGCGTGGTGGCAGGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATTGCTTGAACCTGGGA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_1908:HG2_PB_HySA_3535:HG4_PB_assemblyticsfalcon_13305:HG4_Ill_svaba_2310:HG4_Ill_GATKHC_2990:HG4_CG_vcfBeta_1216:HG3_PB_assemblyticsfalcon_13536:HG3_Ill_svaba_2358:HG3_Ill_GATKHC_3066:HG3_Ill_GATKHCSBGrefine_1223:HG3_CG_vcfBeta_1066:HG3_10X_allpass_345:HG2_PB_assemblyticsPBcR_13066:HG2_Ill_svaba_2285:HG2_Ill_scalpel_1752:HG2_Ill_SpiralSDKrefine_8451:HG2_Ill_Krunchall_2475:HG2_Ill_GATKHC_3000:HG2_Ill_GATKHCSBGrefine_1236:HG2_CG_vcfBeta_1108:HG2_PB_assemblyticsfalcon_13477:HG2_PB_pbsv_1909:HG3_PB_pbsv_1881;NumClusterSVs=23;ExactMatchIDs=HG2_CG_vcfBeta_1108:HG2_Ill_GATKHCSBGrefine_1236:HG2_Ill_GATKHC_3000:HG2_Ill_Krunchall_2475:HG2_Ill_SpiralSDKrefine_8451:HG2_Ill_scalpel_1752:HG2_Ill_svaba_2285:HG2_PB_assemblyticsPBcR_13066:HG3_10X_allpass_345:HG3_CG_vcfBeta_1066:HG3_Ill_GATKHCSBGrefine_1223:HG3_Ill_GATKHC_3066:HG3_Ill_svaba_2358:HG3_PB_assemblyticsfalcon_13536:HG4_CG_vcfBeta_1216:HG4_Ill_GATKHC_2990:HG4_Ill_svaba_2310:HG4_PB_assemblyticsfalcon_13305;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0547945;ClusterMaxSizeDiff=0.0547945;ClusterMaxEditDist=0.0684932;PBcalls=8;Illcalls=11;TenXcalls=1;CGcalls=3;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=3;HG2count=11;HG3count=7;HG4count=5;NumTechs=4;NumTechsExact=4;SVLEN=-73;DistBack=7705;DistForward=56904;DistMin=7705;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:52825751-52825826;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1922.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:58:1/1:6:23:1:25:1/1:0:18:0:16:1/1:0:12:./.:.:.:.:.:.
chr2	53625762	HG2_Ill_SVrefine2DISCOVARplusDovetail_6553	TGAAATTATATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAGAAAGAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2643:HG3_10X_allpass_346:HG2_PB_assemblyticsfalcon_13481:HG2_PB_assemblyticsPBcR_13068:HG2_PB_pbsv_1911:HG2_Ill_tnscope_196:HG4_PB_SVrefine2Falcon1Dovetail_1163:HG3_PB_pbsv_1882:HG3_PB_SVrefine2PBcRDovetail_1017:HG3_PB_SVrefine2Falcon1Dovetail_1175:HG3_Ill_SVrefine2DISCOVARDovetail_1322:HG3_Ill_GATKHCSBGrefine_1224:HG2_PB_SVrefine2PBcRplusDovetail_5628:HG2_PB_SVrefine2PB10Xhap12_1482:HG2_PB_SVrefine2Falcon2Bionano_715:HG2_PB_SVrefine2Falcon1plusDovetail_6097:HG2_Ill_breakscan11_252:HG2_Ill_SVrefine2DISCOVARplusDovetail_6553:HG2_Ill_MetaSV_2504:HG2_Ill_GATKHCSBGrefine_1237:HG2_10X_SVrefine210Xhap12_1442:HG2_10X_allpass_281:HG3_Ill_Krunchall_2498:HG2_Ill_Krunchall_2479;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1442:HG2_Ill_GATKHCSBGrefine_1237:HG2_Ill_MetaSV_2504:HG2_Ill_SVrefine2DISCOVARplusDovetail_6553:HG2_Ill_breakscan11_252:HG2_PB_SVrefine2Falcon1plusDovetail_6097:HG2_PB_SVrefine2Falcon2Bionano_715:HG2_PB_SVrefine2PB10Xhap12_1482:HG2_PB_SVrefine2PBcRplusDovetail_5628:HG3_Ill_GATKHCSBGrefine_1224:HG3_Ill_SVrefine2DISCOVARDovetail_1322:HG3_PB_SVrefine2Falcon1Dovetail_1175:HG3_PB_SVrefine2PBcRDovetail_1017:HG3_PB_pbsv_1882:HG4_PB_SVrefine2Falcon1Dovetail_1163;NumExactMatchSVs=15;ClusterMaxShiftDist=0.04741;ClusterMaxSizeDiff=0.04741;ClusterMaxEditDist=0.04741;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-2237;DistBack=86777;DistForward=7288;DistMin=7288;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=2:53625763-53628009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1923.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:79:0|1:35:11:6:31:1|0:0:23:35:0:0/1:43:27:0/1:158:84:2186:.:.
chr2	53825720	HG2_Ill_svaba_2290	GAGGAAGGGAGGAAGGAAGGGAAGGAAAAGGGAGGGAAGGAAGGGAGGAAGGAAGGGAAGGAAAAGGGAGGGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1443:HG3_Ill_GATKHC_3077:HG4_PB_pbsv_1911:HG2_PB_HySA_3542:HG4_Ill_svaba_2315:HG3_Ill_svaba_2368:HG3_Ill_manta_394:HG3_Ill_Krunchall_2500:HG3_Ill_250bpfermikitraw_2438:HG4_PB_HySA_2804:HG2_PB_HySA_3541:HG3_PB_pbsv_1883:HG2_PB_pbsv_1912:HG4_Ill_svaba_2314:HG4_Ill_Krunchall_2578:HG4_Ill_GATKHCSBGrefine_1267:HG4_Ill_250bpfermikitraw_2444:HG4_Ill_150bpfermikitraw_2371:HG3_Ill_svaba_2367:HG2_Ill_svaba_2290:HG2_Ill_GATKHCSBGrefine_1238:HG2_Ill_250bpfermikitraw_2450:HG4_PB_SVrefine2PBcRDovetail_1011:HG4_Ill_SVrefine2DISCOVARDovetail_1347:HG2_PB_SVrefine2PBcRplusDovetail_5629:HG2_PB_SVrefine2PB10Xhap12_1483:HG2_PB_SVrefine2Falcon2Bionano_716;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2450:HG2_Ill_GATKHCSBGrefine_1238:HG2_Ill_svaba_2290:HG3_Ill_svaba_2367:HG4_Ill_150bpfermikitraw_2371:HG4_Ill_250bpfermikitraw_2444:HG4_Ill_GATKHCSBGrefine_1267:HG4_Ill_Krunchall_2578:HG4_Ill_svaba_2314;NumExactMatchSVs=9;ClusterMaxShiftDist=0.169014;ClusterMaxSizeDiff=0.169014;ClusterMaxEditDist=0.169014;PBcalls=10;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-72;DistBack=48629;DistForward=-7;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=55;REFWIDENED=2:53825719-53825848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1924.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:38:./.:15:10:2:20:0|1:28:2:0:11:0/1:26:13:./.:.:.:.:.:.
chr2	54565494	HG2_PB_SVrefine2Falcon2Bionano_718	CTCAGGAGTTCAAAGCTGCAGTGAGCAATGATTGTGCCACTGTGCTCCAGCCTGTGCAACAGAGCAAGACCCCATCTCTAAAAACAAATTTTAAAATAATAAAATAAAAACCAAAAACAATGAACTTAAATGTACTCATTTCTAACTATCCAAGAAATAATAAAGAATGTATATTTCACATATTTGTAAACTGTTCCTTTAAGATGACAGGTTTCTTTTTAAAGGTTAGCCTGGTTAAGAAAAAAACTGGTTGACGGTAATGCTGTCTTTATAATAAGAGTAAAGAAAATAAACTTGCCTAAATATTTTAAATGACACCTGTTGTTTTAAGTGTTTTTGCTAAGATAATATCTTTAGGATGCAAGACGAGATTGGTTGGTTTTATTTGTTTAGAAGATTTTTAAGATTTCGTACATTTCTACCTAGGAACATAAAATTGGGGATGCTAAAAAAAGTAAGTTGTTTTAGCTCAGTCACTTCCAAAGAAAACTGGTTTGATTGTCTTATATTTTTGGCTGGGTGCGGTGGCTCATGCCTGCTATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCATGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAGACCCCCCCCCATCTCTACTAAAAATACAAAAAATTAGATGGGCATGGCGGTGCGTGCCTGTAGTCCTAGCTATTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGCAGGCAGAGGTTGCAGTGAGCCAAGATCGTGCCACTGGACTCCAGCCTGGCAACAGAACAAGACTCCATCTCAAGAAAAAATAAAATAAAATAAAATAAAAATATTTTTAAATATTGGTACTTTAAAGGAGATTATACTAGGTTGGTATTTTCAAAAGTTTAATTTTCAGAGCACTGACCCTTGCCTACATGCTTAACAAAATAAATTTGCAAAGTCAAATATGTTTTGGAAAAGCTGTATTTTTATAAACCTTTCTCAGAGCTTCACAATTCACATTGGTATATAAAGGTTCTGAGAAATCTTGTGATAAACTTATTTAACTTTGCTTTTCTCACTATTTCCCAAAGTCATTTAACTGTGGACTCCTTTGTATAACACCTATTAATATGCTGGAGAACTAGTGTTCCACAGAACACAATTTTGGAATTTTTTATGGGGGGGTGCATTATGAACTGCTTAAAAACATTTTTTTAAAGCACTCATAGCATCTATAGCAAAATAGAGATGAATTTAGGTACAGTGTAACCAATGTGACCTTAGCTGCCCTAGTGTTTGTGATAGTACTTCAATTTTTTAAAGCCACTGAGCTCTACCAACAAAATGCGATTGTTTATGTTTAGGTTTTGTCAAAAGCCCACATTTCCTTGGGAATCCACAAAGTATGATTTTATGTTCCACAGATGACCACCACCAGCCATCTTGGCTACGCGATTGTGGCTGTGGAGCTTGGCTTACGACCTCTTGCATTCACTTAACTAGTTCCTCTAGGATACTTCACTTGCTTTTTACTACTTCTCCTCTGAGGATTCTCCCTTAATTTCTCAAAGAATGGAAAATAGGTAATCTTTACTAAAACATCTCTGAGAGCTTAGGGATACTAGGAGTATAACATAGAGACTGCCTTACACTGGCTTCCAAATGTGACTAAGGGACCCACAGTGCAACAGCCCTTGGCCTTCCCAGAGCTGCAGGTTAGAAGGAGCCCCGTCATCCGGAATCTCCAGGCAACTCCTGACCATGGAACCCAGTGACTATCATCCTGGGGCAGGAAAGAAGACAGTCCTTAGACTGGTAGGGATAACTCCTCTCTGGGTCCAAAGTTTGAGTTAGGCAAAACCCCCTCTACAATCTGCAAGATATGATCTGTTCCCCAGAGCCTAGACAAAGCCATCACGCTAGGTAACTTCCCAGCTTATTTTGTCATAAATAACTGTGTTAACCCCCCACAATCCAATGTAAGTGATGGTACACAG	TAA	20	PASS	ClusterIDs=HG2_Ill_Krunchall_2487:HG4_Ill_GATKHCSBGrefine_1270:HG3_PB_pbsv_1886:HG4_PB_pbsv_1913:HG2_PB_pbsv_1915:HG2_PB_assemblyticsPBcR_13074:HG2_PB_SVrefine2PBcRplusDovetail_5631:HG4_PB_assemblyticsfalcon_13311:HG4_PB_SVrefine2PBcRDovetail_1012:HG4_Ill_SVrefine2DISCOVARDovetail_1349:HG3_PB_assemblyticsfalcon_13544:HG3_PB_SVrefine2PBcRDovetail_1019:HG3_PB_SVrefine2Falcon1Dovetail_1177:HG2_PB_assemblyticsfalcon_13484:HG2_PB_SVrefine2Falcon2Bionano_718:HG2_PB_SVrefine2Falcon1plusDovetail_6099:HG2_Ill_SVrefine2DISCOVARplusDovetail_6559:HG2_10X_SVrefine210Xhap12_1448:HG2_Ill_tnscope_197:HG3_Ill_MetaSV_2644:HG4_Ill_MetaSV_2591:HG4_10X_allpass_320:HG3_10X_allpass_348:HG2_Ill_MetaSV_2505:HG2_10X_allpass_283:HG4_Ill_Krunchall_2582:HG3_Ill_Krunchall_2507;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1448:HG2_Ill_SVrefine2DISCOVARplusDovetail_6559:HG2_PB_SVrefine2Falcon1plusDovetail_6099:HG2_PB_SVrefine2Falcon2Bionano_718:HG2_PB_assemblyticsfalcon_13484:HG3_PB_SVrefine2Falcon1Dovetail_1177:HG3_PB_SVrefine2PBcRDovetail_1019:HG3_PB_assemblyticsfalcon_13544:HG4_Ill_SVrefine2DISCOVARDovetail_1349:HG4_PB_SVrefine2PBcRDovetail_1012:HG4_PB_assemblyticsfalcon_13311;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0422463;ClusterMaxSizeDiff=0.0422463;ClusterMaxEditDist=0.0422463;PBcalls=13;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1977;DistBack=-78;DistForward=48856;DistMin=-78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:54565494-54567473;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9995;PctRecOverlap=0.9985;SizeDiff=1;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1925.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:64:0|1:20:1:0:38:0|1:59:0:0:19:0/1:63:20:0/1:171:75:1916:.:.
chr2	54693478	HG4_Ill_MetaSV_2592	TAAGTATGTTTATTCTTCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGAAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1020:HG4_Ill_Krunchall_2586:HG4_Ill_GATKHCSBGrefine_1272:HG3_Ill_GATKHCSBGrefine_1229:HG2_PB_assemblyticsPBcR_13077:HG4_Ill_Krunchall_2585:HG3_Ill_Krunchall_2510:HG4_Ill_Spiral_143:HG2_PB_HySA_3549:HG2_Ill_Spiral_116:HG3_Ill_manta_396:HG4_Ill_MetaSV_2593:HG3_Ill_MetaSV_2646:HG4_Ill_Spiral_142:HG3_Ill_Spiral_1961:HG4_PB_pbsv_1914:HG2_PB_pbsv_1916:HG2_Ill_tnscope_198:HG2_Ill_MetaSV_2506:HG4_PB_assemblyticsfalcon_13314:HG4_PB_SVrefine2PBcRDovetail_1013:HG4_Ill_scalpel_1696:HG4_Ill_manta_452:HG4_Ill_SVrefine2DISCOVARDovetail_1351:HG4_Ill_MetaSV_2592:HG4_Ill_GATKHCSBGrefine_1271:HG4_10X_allpass_321:HG3_PB_pbsv_1888:HG3_Ill_scalpel_1876:HG3_Ill_SVrefine2DISCOVARDovetail_1328:HG3_Ill_MetaSV_2645:HG3_10X_allpass_349:HG2_PB_SVrefine2PBcRplusDovetail_5632:HG2_PB_SVrefine2PB10Xhap12_1486:HG2_Ill_scalpel_1760:HG2_Ill_manta_513:HG2_Ill_breakscan11_253:HG2_Ill_SpiralSDKrefine_8460:HG2_Ill_SVrefine2DISCOVARplusDovetail_6560:HG2_Ill_GATKHCSBGrefine_1243:HG2_10X_allpass_284:HG2_10X_SVrefine210Xhap12_1449;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1449:HG2_10X_allpass_284:HG2_Ill_GATKHCSBGrefine_1243:HG2_Ill_SVrefine2DISCOVARplusDovetail_6560:HG2_Ill_SpiralSDKrefine_8460:HG2_Ill_breakscan11_253:HG2_Ill_manta_513:HG2_Ill_scalpel_1760:HG2_PB_SVrefine2PB10Xhap12_1486:HG2_PB_SVrefine2PBcRplusDovetail_5632:HG3_10X_allpass_349:HG3_Ill_MetaSV_2645:HG3_Ill_SVrefine2DISCOVARDovetail_1328:HG3_Ill_scalpel_1876:HG3_PB_pbsv_1888:HG4_10X_allpass_321:HG4_Ill_GATKHCSBGrefine_1271:HG4_Ill_MetaSV_2592:HG4_Ill_SVrefine2DISCOVARDovetail_1351:HG4_Ill_manta_452:HG4_Ill_scalpel_1696:HG4_PB_SVrefine2PBcRDovetail_1013:HG4_PB_assemblyticsfalcon_13314;NumExactMatchSVs=23;ClusterMaxShiftDist=0.124031;ClusterMaxSizeDiff=0.124031;ClusterMaxEditDist=0.124031;PBcalls=10;Illcalls=28;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-264;DistBack=19889;DistForward=14810;DistMin=14810;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:54693479-54693758;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1926.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:45:./.:20:7:0:30:0|1:34:0:0:26:0/1:30:27:./.:.:.:.:.:.
chr2	56492513	HG2_Ill_SpiralSDKrefine_8468	CTACTTCATAACAAGAAAACAAATAACCCTATTTTAAAAAGGGCAAAGGACCTGAGTAGA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_1892:HG2_PB_HySA_3567:HG4_PB_HySA_2824:HG3_PB_HySA_2866:HG2_PB_pbsv_1920:HG4_PB_pbsv_1921:HG4_PB_SVrefine2PBcRDovetail_1018:HG4_Ill_svaba_2334:HG4_Ill_manta_453:HG4_Ill_SVrefine2DISCOVARDovetail_1364:HG4_Ill_Krunchall_2607:HG4_Ill_GATKHCSBGrefine_1277:HG4_Ill_250bpfermikitraw_2469:HG3_PB_SVrefine2PBcRDovetail_1021:HG3_PB_SVrefine2Falcon1Dovetail_1182:HG3_Ill_svaba_2386:HG3_Ill_scalpel_1886:HG3_Ill_manta_398:HG3_Ill_SVrefine2DISCOVARDovetail_1338:HG3_Ill_Krunchall_2524:HG3_Ill_GATKHCSBGrefine_1234:HG3_Ill_250bpfermikitraw_2458:HG3_Ill_150bpfermikitraw_2367:HG2_PB_SVrefine2PBcRplusDovetail_5636:HG2_PB_SVrefine2Falcon2Bionano_724:HG2_PB_SVrefine2Falcon1plusDovetail_6102:HG2_Ill_svaba_2310:HG2_Ill_scalpel_1770:HG2_Ill_manta_514:HG2_Ill_SpiralSDKrefine_8468:HG2_Ill_SVrefine2DISCOVARplusDovetail_6569:HG2_Ill_Krunchall_2503:HG2_Ill_GATKHCSBGrefine_1245:HG2_Ill_250bpfermikitraw_2469:HG2_Ill_150bpfermikitraw_2270:HG2_10X_SVrefine210Xhap12_1454;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1454:HG2_Ill_150bpfermikitraw_2270:HG2_Ill_250bpfermikitraw_2469:HG2_Ill_GATKHCSBGrefine_1245:HG2_Ill_Krunchall_2503:HG2_Ill_SVrefine2DISCOVARplusDovetail_6569:HG2_Ill_SpiralSDKrefine_8468:HG2_Ill_manta_514:HG2_Ill_scalpel_1770:HG2_Ill_svaba_2310:HG2_PB_SVrefine2Falcon1plusDovetail_6102:HG2_PB_SVrefine2Falcon2Bionano_724:HG2_PB_SVrefine2PBcRplusDovetail_5636:HG3_Ill_150bpfermikitraw_2367:HG3_Ill_250bpfermikitraw_2458:HG3_Ill_GATKHCSBGrefine_1234:HG3_Ill_Krunchall_2524:HG3_Ill_SVrefine2DISCOVARDovetail_1338:HG3_Ill_manta_398:HG3_Ill_scalpel_1886:HG3_Ill_svaba_2386:HG3_PB_SVrefine2Falcon1Dovetail_1182:HG3_PB_SVrefine2PBcRDovetail_1021:HG4_Ill_250bpfermikitraw_2469:HG4_Ill_GATKHCSBGrefine_1277:HG4_Ill_Krunchall_2607:HG4_Ill_SVrefine2DISCOVARDovetail_1364:HG4_Ill_manta_453:HG4_Ill_svaba_2334:HG4_PB_SVrefine2PBcRDovetail_1018;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0338983;PBcalls=12;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-59;DistBack=88678;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=65;REFWIDENED=2:56492514-56492637;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1927.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:1:16:1:15:./.:0:5:0:14:1/1:0:43:./.:.:.:.:.:.
chr2	57604681	HG2_PB_SVrefine2PB10Xhap12_1490	AAGGAAAGGAGAGGGTAGGAGAGGGAAGGGGAGGGGAGGGGAGGAGAGGAAAGGGGAGGGG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1490:HG4_PB_pbsv_1928:HG3_PB_assemblyticsfalcon_13573:HG2_PB_assemblyticsPBcR_13096:HG2_PB_pbsv_1923:HG4_PB_HySA_2839:HG4_PB_SVrefine2PBcRDovetail_1021;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1490:HG4_PB_SVrefine2PBcRDovetail_1021;NumExactMatchSVs=2;ClusterMaxShiftDist=0.301887;ClusterMaxSizeDiff=0.301887;ClusterMaxEditDist=0.358491;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-60;DistBack=-121;DistForward=21713;DistMin=-121;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=168;REFWIDENED=2:57604682-57604909;PctSeqSimilarity=0.9594;PctSizeSimilarity=0.9167;PctRecOverlap=0.1803;SizeDiff=5;StartDistance=-50;EndDistance=-45;GTMatch=1;TruScore=68;MatchId=1928.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:14:48:1/1:5:21:7:26:0/0:19:0:18:0:./.:11:1:./.:.:.:.:.:.
chr2	57662403	HG3_Ill_Krunchall_2541	CCCTATCTGGGAGACAGATGTCAGTGACTGACTTGAATAACATAGGGTATGGGATCACACCCTATTCCCTATCTGTCAAAG	C	20	PASS	ClusterIDs=HG3_PB_pbsv_1906:HG2_PB_PB10Xdip_17533:HG3_Ill_svaba_2401:HG3_Ill_manta_402:HG3_Ill_Krunchall_2541:HG3_Ill_GATKHC_3124:HG3_Ill_GATKHCSBGrefine_1243:HG3_Ill_250bpfermikitraw_2475:HG3_Ill_150bpfermikitraw_2385:HG2_Ill_svaba_2313:HG2_Ill_scalpel_1773:HG2_Ill_manta_515:HG2_Ill_SpiralSDKrefine_8473:HG2_Ill_Krunchall_2506:HG2_Ill_GATKHC_3035:HG2_Ill_GATKHCSBGrefine_1247:HG2_Ill_250bpfermikitraw_2472:HG2_Ill_150bpfermikitraw_2273:HG2_PB_PB10Xdip_17532:HG2_PB_pbsv_1924;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2273:HG2_Ill_250bpfermikitraw_2472:HG2_Ill_GATKHCSBGrefine_1247:HG2_Ill_GATKHC_3035:HG2_Ill_Krunchall_2506:HG2_Ill_SpiralSDKrefine_8473:HG2_Ill_manta_515:HG2_Ill_scalpel_1773:HG2_Ill_svaba_2313:HG3_Ill_150bpfermikitraw_2385:HG3_Ill_250bpfermikitraw_2475:HG3_Ill_GATKHCSBGrefine_1243:HG3_Ill_GATKHC_3124:HG3_Ill_Krunchall_2541:HG3_Ill_manta_402:HG3_Ill_svaba_2401;NumExactMatchSVs=16;ClusterMaxShiftDist=0.204082;ClusterMaxSizeDiff=0.204082;ClusterMaxEditDist=0.204082;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-80;DistBack=35947;DistForward=20244;DistMin=20244;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:57662402-57662484;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1929.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:22:0|1:45:0:4:22:0|1:34:0:0:19:0/1:25:23:./.:.:.:.:.:.
chr2	60694599	HG4_PB_SVrefine2Falcon1Dovetail_1169	GATGGTGGTGGTAATGGTGGTGGTGGTGATGGTGGTGATGATGGTGATGGTACTGGTGGTGATGGTGATGGTGATGGTACTGGTGATGGTGGTGGTGGTAGTGATGGTGGTGGTAATGGTGGTGGTGGTGATGGTGGTGGTGGTGGTAGTGATGGTGGTGGTAATGGTGGTGGTGGTGATGGTGGTGATGATGGTGATGGTACTGGTGGTGATGGTGATGGTGGTGGTGGTGGTGATGGTACTGGTGGTGATGGTACTGGTGGTGATGGTGGTGGTGGTAGTGATGGTGGTGGTAATGGTGGTGGTGGAGATGGTGGTGTTGATGGTGATGGTACTGGTGGTGATGGTACTGGTGGTGATGGTGATGGTGGTGGTGGTGGTGATGCTACTGGTGGTGATGGTACTGGTGGTGATGGTGGTGGTGGTAGTGATGGTGGTGGTAATGGTGGTGGTGGTGGTGGTGGTAGTGATGGTGGTGGTGGTGATGGTACTGGTGGTGATGGTGGTGGTGGTAGTGATGGTGGTGGTAATGGTGGTGGTGGTGATGGTGGTGGTGGTGGTAGTGGTGGTGATGGTGGTGATGGTACTGGTGGTGATGGTGGTGGTGGTAGTGATGGTGGTGGTT	TG	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1034:HG2_PB_pbsv_1932:HG3_PB_assemblyticsfalcon_13593:HG3_PB_SVrefine2Falcon1Dovetail_1196:HG4_PB_assemblyticsfalcon_13356:HG4_PB_SVrefine2Falcon1Dovetail_1169:HG3_PB_pbsv_1919:HG2_10X_SVrefine210Xhap12_1461;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_1169:HG4_PB_assemblyticsfalcon_13356;NumExactMatchSVs=2;ClusterMaxShiftDist=0.227848;ClusterMaxSizeDiff=0.227848;ClusterMaxEditDist=0.233901;PBcalls=7;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-623;DistBack=2;DistForward=-463;DistMin=-463;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=438;REFWIDENED=2:60694195-60695255;PctSeqSimilarity=0.9091;PctSizeSimilarity=0.9936;PctRecOverlap=0.8949;SizeDiff=-4;StartDistance=66;EndDistance=63;GTMatch=0;TruScore=93;MatchId=1930.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:37:0|1:26:2:2:27:./.:258:25:44:16:./.:11:1:./.:101:7:.:.:.
chr2	61880173	HG4_Ill_GATKHCSBGrefine_1292	TCAGGAAGAATCAAAGTAAACAATTGCCATCTGCAAATGACGAAAGACTTAAAGTAGCCATAGTTAAATATCTGATGAGAGTTTTCTATAATAATAATTCAACTTGCAGGGAAATTTGCCTATATTCTGTGTCATACAACATTTTAAGATTATAACTAGAATTATGACTGATAGTGTTATATTAGGACATATCACTTTTTAGGAATTTCATACAACTTCTGGAACAATTTATTTATTTATTTATTTGTTTTCGAGATGGAATCTTGCTCTGTCCCCCAAGCTGCAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACCTCCCGGATTCAAGCAATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGAACGTGTCACCAGGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCTCTATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGTGTGAGCCACCGTGCCTGGCTTGGAACACTTATTTTATTTTGAGACAGAGTCTTGCTCTTGTCATCCGGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACTTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCGGCCTCCTGACTAGCTGGGATTACAGGAGGCTGCCATAATGCCCTGCTAATTTTTGTATTTTCAGTAGAGATAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACTTGCCTCAGCCTCCCAAAGAAAGCAAAGACCTTCATTGTTTATTTTCTTTATAATTTTTTCTTTTGAGACAGTCTCATTCTGTCACCCAGGCTGGAGTGCAGCAGTACAAGTACAGCTCACTACAGCCTCAATCTCCTGGGCTCAAGTGATC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_1935:HG2_10X_allpass_286:HG2_Ill_tnscope_199:HG4_PB_pbsv_1941:HG4_PB_assemblyticsfalcon_13359:HG4_PB_SVrefine2PBcRDovetail_1028:HG4_PB_SVrefine2Falcon1Dovetail_1170:HG4_Ill_manta_458:HG4_Ill_MetaSV_2599:HG4_Ill_GATKHCSBGrefine_1292:HG4_10X_allpass_325:HG3_PB_SVrefine2Falcon1Dovetail_1197:HG2_PB_assemblyticsfalcon_13525:HG2_PB_assemblyticsPBcR_13117:HG2_PB_SVrefine2PBcRplusDovetail_5647:HG2_PB_SVrefine2PB10Xhap12_1500:HG2_PB_SVrefine2Falcon2Bionano_732:HG2_PB_SVrefine2Falcon1plusDovetail_6112:HG2_Ill_manta_519:HG2_Ill_breakscan11_254:HG2_Ill_SpiralSDKrefine_8488:HG2_Ill_SVrefine2DISCOVARplusDovetail_6593:HG2_Ill_MetaSV_2509:HG2_Ill_GATKHCSBGrefine_1256:HG2_10X_SVrefine210Xhap12_1464:HG3_PB_assemblyticsfalcon_13595:HG4_Ill_Spiral_146:HG2_Ill_Spiral_117;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1464:HG2_Ill_GATKHCSBGrefine_1256:HG2_Ill_MetaSV_2509:HG2_Ill_SVrefine2DISCOVARplusDovetail_6593:HG2_Ill_SpiralSDKrefine_8488:HG2_Ill_breakscan11_254:HG2_Ill_manta_519:HG2_PB_SVrefine2Falcon1plusDovetail_6112:HG2_PB_SVrefine2Falcon2Bionano_732:HG2_PB_SVrefine2PB10Xhap12_1500:HG2_PB_SVrefine2PBcRplusDovetail_5647:HG2_PB_assemblyticsPBcR_13117:HG2_PB_assemblyticsfalcon_13525:HG3_PB_SVrefine2Falcon1Dovetail_1197:HG4_10X_allpass_325:HG4_Ill_GATKHCSBGrefine_1292:HG4_Ill_MetaSV_2599:HG4_Ill_manta_458:HG4_PB_SVrefine2Falcon1Dovetail_1170:HG4_PB_SVrefine2PBcRDovetail_1028:HG4_PB_assemblyticsfalcon_13359:HG4_PB_pbsv_1941;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00321371;ClusterMaxSizeDiff=0.00321371;ClusterMaxEditDist=0.00321543;PBcalls=13;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-933;DistBack=-235;DistForward=-742;DistMin=-742;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:61880174-61881107;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1931.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:35:0|1:41:2:0:29:1|0:0:36:40:0:0/1:63:19:0/1:85:42:.:.:.
chr2	64504938	HG2_Ill_GATKHC_3084	CTTCCTTCCTTCTTTCTTTCTCCTTTCTTTCTTCCTTTCTTTCTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCCTTT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_1948:HG4_PB_SVrefine2PBcRDovetail_1033:HG3_PB_HySA_2919:HG2_PB_HySA_3624:HG3_PB_HySA_2918:HG4_Ill_svaba_2375:HG4_Ill_scalpel_1736:HG4_Ill_GATKHC_3080:HG4_Ill_GATKHCSBGrefine_1303:HG3_Ill_svaba_2434:HG3_Ill_scalpel_1916:HG3_Ill_GATKHC_3178:HG3_Ill_GATKHCSBGrefine_1268:HG2_Ill_svaba_2346:HG2_Ill_scalpel_1795:HG2_Ill_manta_522:HG2_Ill_SpiralSDKrefine_8497:HG2_Ill_GATKHC_3084:HG2_Ill_GATKHCSBGrefine_1266:HG2_Ill_250bpfermikitraw_2513:HG2_Ill_150bpfermikitraw_2316:HG4_PB_pbsv_1951:HG2_PB_HySA_3623:HG3_PB_SVrefine2Falcon1Dovetail_1201:HG2_PB_SVrefine2PBcRplusDovetail_5653:HG2_PB_SVrefine2PB10Xhap12_1510:HG2_PB_SVrefine2Falcon2Bionano_740:HG2_Ill_SVrefine2DISCOVARplusDovetail_6608:HG2_10X_SVrefine210Xhap12_1470:HG3_PB_pbsv_1931:HG2_PB_SVrefine2Falcon1plusDovetail_6120;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2316:HG2_Ill_250bpfermikitraw_2513:HG2_Ill_GATKHCSBGrefine_1266:HG2_Ill_GATKHC_3084:HG2_Ill_SpiralSDKrefine_8497:HG2_Ill_manta_522:HG2_Ill_scalpel_1795:HG2_Ill_svaba_2346:HG3_Ill_GATKHCSBGrefine_1268:HG3_Ill_GATKHC_3178:HG3_Ill_scalpel_1916:HG3_Ill_svaba_2434:HG4_Ill_GATKHCSBGrefine_1303:HG4_Ill_GATKHC_3080:HG4_Ill_scalpel_1736:HG4_Ill_svaba_2375;NumExactMatchSVs=16;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.185185;PBcalls=13;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-107;DistBack=24272;DistForward=-105;DistMin=-105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=145;REFWIDENED=2:64504931-64505182;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1932.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:64:1/1:2:36:5:16:./.:1:15:1:13:1/1:0:40:./.:.:.:.:.:.
chr2	65807507	HG2_PB_SVrefine2Falcon1plusDovetail_6126	TCATGTTACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_HySA_3646:HG3_PB_assemblyticsfalcon_13616:HG4_PB_assemblyticsfalcon_13390:HG2_Ill_Krunchall_2554:HG4_Ill_GATKHCSBGrefine_1308:HG2_Ill_GATKHCSBGrefine_1270:HG2_Ill_tnscope_200:HG4_PB_pbsv_1962:HG4_PB_SVrefine2PBcRDovetail_1039:HG4_Ill_scalpel_1744:HG4_Ill_SVrefine2DISCOVARDovetail_1403:HG4_10X_allpass_328:HG3_PB_SVrefine2Falcon1Dovetail_1208:HG2_PB_pbsv_1958:HG2_PB_assemblyticsfalcon_13558:HG2_PB_SVrefine2Falcon1plusDovetail_6126:HG2_Ill_scalpel_1799:HG2_Ill_SVrefine2DISCOVARplusDovetail_6613:HG2_10X_allpass_287:HG2_10X_SVrefine210Xhap12_1477:HG4_Ill_manta_461:HG2_Ill_manta_524:HG4_Ill_Spiral_147:HG2_Ill_Spiral_118:HG4_Ill_MetaSV_2605:HG2_Ill_MetaSV_2515;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1477:HG2_10X_allpass_287:HG2_Ill_SVrefine2DISCOVARplusDovetail_6613:HG2_Ill_scalpel_1799:HG2_PB_SVrefine2Falcon1plusDovetail_6126:HG2_PB_assemblyticsfalcon_13558:HG2_PB_pbsv_1958:HG3_PB_SVrefine2Falcon1Dovetail_1208:HG4_10X_allpass_328:HG4_Ill_SVrefine2DISCOVARDovetail_1403:HG4_Ill_scalpel_1744:HG4_PB_SVrefine2PBcRDovetail_1039:HG4_PB_pbsv_1962;NumExactMatchSVs=13;ClusterMaxShiftDist=0.11236;ClusterMaxSizeDiff=0.11236;ClusterMaxEditDist=0.11236;PBcalls=9;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-86;DistForward=-299;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=2:65807508-65807829;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1933.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:22:0|1:28:1:0:20:1|0:0:30:43:0:0/1:35:17:0/1:28:9:.:.:.
chr2	69650278	HG4_PB_pbsv_1981	TTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGGTGAGATGGGCTG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_2357:HG4_10X_allpass_332:HG2_Ill_breakscan11_256:HG2_PB_pbsv_1972:HG4_PB_pbsv_1981:HG4_Ill_svaba_2411:HG4_Ill_scalpel_1761:HG4_Ill_manta_467:HG4_Ill_Krunchall_2700:HG4_Ill_GATKHC_3123:HG4_Ill_GATKHCSBGrefine_1319:HG4_Ill_250bpfermikitraw_2559:HG4_Ill_150bpfermikitraw_2473:HG2_Ill_svaba_2383:HG2_Ill_scalpel_1818:HG2_Ill_manta_532:HG2_Ill_SpiralSDKrefine_8531:HG2_Ill_Krunchall_2588:HG2_Ill_GATKHC_3126:HG2_Ill_GATKHCSBGrefine_1280:HG2_Ill_250bpfermikitraw_2557;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2357:HG4_PB_pbsv_1981:HG4_Ill_svaba_2411:HG4_Ill_scalpel_1761:HG4_Ill_manta_467:HG4_Ill_Krunchall_2700:HG4_Ill_GATKHC_3123:HG4_Ill_GATKHCSBGrefine_1319:HG4_Ill_250bpfermikitraw_2559:HG4_Ill_150bpfermikitraw_2473:HG2_Ill_svaba_2383:HG2_Ill_scalpel_1818:HG2_Ill_manta_532:HG2_Ill_SpiralSDKrefine_8531:HG2_Ill_Krunchall_2588:HG2_Ill_GATKHC_3126:HG2_Ill_GATKHCSBGrefine_1280:HG2_Ill_250bpfermikitraw_2557;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0384615;PBcalls=2;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-51;DistBack=30903;DistForward=18858;DistMin=18858;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=2:69650277-69650342;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1935.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:22:0|1:30:2:3:19:./.:1:15:38:2:0/1:16:14:./.:.:.:.:.:.
chr2	70125044	HG2_Ill_SpiralSDKrefine_8534	TGAGGAGAGGAAGTAGTGATTTTTAAATAAGGGAGTGGCATGGTTATATGTGTGTTTTGGAATAATGACTCTGGGGGCAGCATGGAGGACAGATGGGAGGTGGGTTAGATTGAAGGCAGGGAGAACTGCTGATTTGTGCAAGTGAAAGATGATAAAGGCCTGAACTGAGTTGAGAATGATTCAGGAGCTGGGGGAAGTGGGAGTGAGTAGTTAGTAATGCCTCTCAGGTGTCAGGCTGGGACCCTGAGTGATACAGTTAACCCAGAACAGAGTTTCTGGAAGGGGAACTGCTGGGAAATGGAAGAACAAAATCCAGCTGCCAGATAGAGATGACATTGGGCAGCTGCATACTTGTCTCATAGCTTAGAAGTGGGGTGGATAGGGGAGGGAATGCTGTCTAGCCTTCATAATAGCAGAGAGATGAGGGAAGAGGAAAAAGAGGGAGGGATTATATAGAGGAGGGAGAGCATAGAGCGAGAGATGGGGGAAGAGAGAGATGGGTATAGAGAGAGGAAATGAAGA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_119:HG2_10X_allpass_289:HG2_PB_pbsv_1974:HG2_Ill_Krunchall_2593:HG2_PB_assemblyticsPBcR_13175:HG2_PB_assemblyticsfalcon_13585:HG3_Ill_Spiral_2033:HG2_PB_SVrefine2PB10Xhap12_1530:HG3_PB_pbsv_1956:HG2_Ill_tnscope_201:HG4_Ill_Cortex_1808:HG3_Ill_manta_412:HG3_Ill_SVrefine2DISCOVARDovetail_1392:HG3_Ill_MetaSV_2660:HG3_Ill_GATKHCSBGrefine_1281:HG3_Ill_Cortex_1858:HG3_10X_allpass_356:HG2_PB_SVrefine2PBcRplusDovetail_5670:HG2_PB_SVrefine2PB10Xhap12_1529:HG2_PB_SVrefine2Falcon1plusDovetail_6137:HG2_Ill_manta_533:HG2_Ill_breakscan11_257:HG2_Ill_SpiralSDKrefine_8534:HG2_Ill_MetaSV_2520:HG2_Ill_GATKHCSBGrefine_1281:HG2_Ill_Cortex_4325:HG2_10X_SVrefine210Xhap12_1488;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1488:HG2_Ill_Cortex_4325:HG2_Ill_GATKHCSBGrefine_1281:HG2_Ill_MetaSV_2520:HG2_Ill_SpiralSDKrefine_8534:HG2_Ill_breakscan11_257:HG2_Ill_manta_533:HG2_PB_SVrefine2Falcon1plusDovetail_6137:HG2_PB_SVrefine2PB10Xhap12_1529:HG2_PB_SVrefine2PBcRplusDovetail_5670:HG3_10X_allpass_356:HG3_Ill_Cortex_1858:HG3_Ill_GATKHCSBGrefine_1281:HG3_Ill_MetaSV_2660:HG3_Ill_SVrefine2DISCOVARDovetail_1392:HG3_Ill_manta_412:HG4_Ill_Cortex_1808;NumExactMatchSVs=17;ClusterMaxShiftDist=0.047259;ClusterMaxSizeDiff=0.047259;ClusterMaxEditDist=0.047259;PBcalls=8;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-521;DistBack=401;DistForward=-517;DistMin=-517;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=2:70125045-70125574;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1936.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:33:0|1:31:1:2:29:0|1:55:0:0:32:0/1:45:19:0/1:55:12:.:.:.
chr2	70552568	HG2_Ill_GATKHCSBGrefine_1282	GATTTATATATATATATATATATATATATATATATATATTTTAGATGGAGTCTTGCTCTGTCGCCAGGCTGGATTGCAGTGTTATGATCTCGGCTCACTGTAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGACTCCTGAGTAGCTGGGACTACAGGCGCACACCACCATGCCCAGCTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1494:HG2_PB_PB10Xdip_17624:HG2_PB_SVrefine2PB10Xhap12_1532:HG3_PB_pbsv_1958:HG3_Ill_Krunchall_2622:HG2_PB_pbsv_1976:HG3_PB_HySA_2958:HG2_PB_HySA_3679:HG3_Ill_svaba_2474:HG3_Ill_scalpel_1939:HG3_Ill_GATKHCSBGrefine_1283:HG3_10X_allpass_357:HG2_Ill_svaba_2388:HG2_Ill_scalpel_1820:HG2_Ill_manta_534:HG2_Ill_GATKHCSBGrefine_1282:HG2_PB_SVrefine2Falcon1plusDovetail_6138:HG3_Ill_SVrefine2DISCOVARDovetail_1393:HG2_PB_SVrefine2PBcRplusDovetail_5671:HG2_PB_SVrefine2PB10Xhap12_1531:HG2_Ill_SVrefine2DISCOVARplusDovetail_6638;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1282:HG2_Ill_manta_534:HG2_Ill_scalpel_1820:HG2_Ill_svaba_2388:HG3_10X_allpass_357:HG3_Ill_GATKHCSBGrefine_1283:HG3_Ill_scalpel_1939:HG3_Ill_svaba_2474;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0321716;ClusterMaxSizeDiff=0.0321716;ClusterMaxEditDist=0.107527;PBcalls=9;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-187;DistBack=34473;DistForward=-185;DistMin=-185;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=126;REFWIDENED=2:70552447-70552759;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1937.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:1|0:5:19:17:2:0|1:28:2:0:8:0/1:41:33:./.:.:.:.:.:.
chr2	71164202	HG3_Ill_250bpfermikitraw_2559	AAGCCAGAGGCTCACTGGAGTAAACCAGCATGGCCCGCCACAGCTATGCAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1498:HG4_PB_assemblyticsfalcon_13426:HG4_Ill_svaba_2418:HG4_Ill_Krunchall_2711:HG4_Ill_GATKHC_3132:HG4_Ill_GATKHCSBGrefine_1326:HG4_Ill_250bpfermikitraw_2569:HG4_Ill_150bpfermikitraw_2483:HG3_PB_assemblyticsfalcon_13656:HG3_Ill_svaba_2477:HG3_Ill_Krunchall_2625:HG3_Ill_GATKHC_3229:HG3_Ill_GATKHCSBGrefine_1284:HG3_Ill_250bpfermikitraw_2559:HG3_Ill_150bpfermikitraw_2475:HG2_Ill_svaba_2391:HG2_Ill_SpiralSDKrefine_8539:HG2_Ill_GATKHC_3138:HG2_Ill_GATKHCSBGrefine_1286:HG2_Ill_250bpfermikitraw_2566:HG2_Ill_150bpfermikitraw_2365:HG2_PB_HySA_3680:HG4_PB_SVrefine2PBcRDovetail_1051:HG4_Ill_SVrefine2DISCOVARDovetail_1425:HG3_Ill_SVrefine2DISCOVARDovetail_1394:HG2_PB_SVrefine2PBcRplusDovetail_5674:HG2_PB_SVrefine2PB10Xhap12_1535:HG2_PB_SVrefine2Falcon2Bionano_754:HG2_PB_SVrefine2Falcon1plusDovetail_6141:HG2_Ill_SVrefine2DISCOVARplusDovetail_6642;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2365:HG2_Ill_250bpfermikitraw_2566:HG2_Ill_GATKHCSBGrefine_1286:HG2_Ill_GATKHC_3138:HG2_Ill_SpiralSDKrefine_8539:HG2_Ill_svaba_2391:HG3_Ill_150bpfermikitraw_2475:HG3_Ill_250bpfermikitraw_2559:HG3_Ill_GATKHCSBGrefine_1284:HG3_Ill_GATKHC_3229:HG3_Ill_Krunchall_2625:HG3_Ill_svaba_2477:HG3_PB_assemblyticsfalcon_13656:HG4_Ill_150bpfermikitraw_2483:HG4_Ill_250bpfermikitraw_2569:HG4_Ill_GATKHCSBGrefine_1326:HG4_Ill_GATKHC_3132:HG4_Ill_Krunchall_2711:HG4_Ill_svaba_2418;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0392157;PBcalls=8;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=42;DistForward=24883;DistMin=42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=104;REFWIDENED=2:71164161-71164314;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1938.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:47:1/1:1:19:2:26:./.:0:3:0:8:1/1:0:40:./.:.:.:.:.:.
chr2	71918606	HG4_PB_SVrefine2Falcon1Dovetail_1181	TTGTCTGCTGGTGTTTTTGAGAGATTACACACACACACACACCATTTTCTGCTCCTTTTCCAGGGCTGTGTGGATAGTCCAGGATGGGGTGA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_149:HG4_PB_HySA_2923:HG3_PB_HySA_2979:HG3_PB_pbsv_1966:HG2_PB_HySA_3697:HG4_PB_SVrefine2PBcRDovetail_1054:HG2_PB_pbsv_1981:HG4_PB_pbsv_1988:HG4_PB_SVrefine2Falcon1Dovetail_1181:HG4_Ill_SVrefine2DISCOVARDovetail_1430:HG4_Ill_GATKHCSBGrefine_1328:HG4_Ill_250bpfermikitraw_2576:HG4_Ill_150bpfermikitraw_2491:HG3_PB_SVrefine2PBcRDovetail_1037:HG3_PB_SVrefine2Falcon1Dovetail_1228:HG3_Ill_manta_413:HG3_Ill_GATKHCSBGrefine_1287:HG3_Ill_250bpfermikitraw_2567:HG3_10X_allpass_358:HG2_PB_SVrefine2PBcRplusDovetail_5677:HG2_PB_SVrefine2PB10Xhap12_1538:HG2_PB_SVrefine2Falcon2Bionano_756:HG2_Ill_SpiralSDKrefine_8546:HG2_Ill_SVrefine2DISCOVARplusDovetail_6645:HG2_Ill_GATKHCSBGrefine_1288:HG2_Ill_250bpfermikitraw_2573:HG2_10X_SVrefine210Xhap12_1503:HG3_PB_assemblyticsfalcon_13667;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1503:HG2_Ill_250bpfermikitraw_2573:HG2_Ill_GATKHCSBGrefine_1288:HG2_Ill_SVrefine2DISCOVARplusDovetail_6645:HG2_Ill_SpiralSDKrefine_8546:HG2_PB_SVrefine2Falcon2Bionano_756:HG2_PB_SVrefine2PB10Xhap12_1538:HG2_PB_SVrefine2PBcRplusDovetail_5677:HG3_10X_allpass_358:HG3_Ill_250bpfermikitraw_2567:HG3_Ill_GATKHCSBGrefine_1287:HG3_Ill_manta_413:HG3_PB_SVrefine2Falcon1Dovetail_1228:HG3_PB_SVrefine2PBcRDovetail_1037:HG4_Ill_150bpfermikitraw_2491:HG4_Ill_250bpfermikitraw_2576:HG4_Ill_GATKHCSBGrefine_1328:HG4_Ill_SVrefine2DISCOVARDovetail_1430:HG4_PB_SVrefine2Falcon1Dovetail_1181:HG4_PB_SVrefine2PBcRDovetail_1054;NumExactMatchSVs=20;ClusterMaxShiftDist=0.201183;ClusterMaxSizeDiff=0.201183;ClusterMaxEditDist=0.216867;PBcalls=14;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-91;DistBack=0;DistForward=20072;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=93;REFWIDENED=2:71918607-71918790;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1939.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:0|1:20:0:2:26:1|0:0:7:15:0:0/1:21:17:./.:.:.:.:.:.
chr2	72739444	HG4_Ill_SVrefine2DISCOVARDovetail_1433	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1231:HG4_PB_HySA_2927:HG3_PB_HySA_2983:HG2_PB_pbsv_1983:HG3_Ill_Krunchall_2637:HG3_Ill_GATKHC_3245:HG3_Ill_GATKHCSBGrefine_1289:HG3_Ill_250bpfermikitraw_2570:HG3_Ill_150bpfermikitraw_2486:HG2_Ill_GATKHC_3151:HG2_Ill_GATKHCSBGrefine_1290:HG2_Ill_250bpfermikitraw_2577:HG2_Ill_150bpfermikitraw_2375:HG2_PB_HySA_3699:HG4_PB_SVrefine2Falcon1Dovetail_1185:HG4_Ill_manta_468:HG4_Ill_SVrefine2DISCOVARDovetail_1433:HG4_Ill_Krunchall_2723:HG4_Ill_GATKHCSBGrefine_1331:HG4_Ill_250bpfermikitraw_2584:HG4_Ill_150bpfermikitraw_2496:HG3_PB_SVrefine2PBcRDovetail_1041:HG2_PB_SVrefine2PBcRplusDovetail_5679:HG2_PB_SVrefine2Falcon2Bionano_758:HG2_PB_SVrefine2Falcon1plusDovetail_6146:HG2_Ill_manta_535:HG2_Ill_SVrefine2DISCOVARplusDovetail_6647:HG2_Ill_GATKHC_3150:HG2_Ill_GATKHCSBGrefine_1289:HG2_Ill_250bpfermikitraw_2576:HG2_Ill_150bpfermikitraw_2374:HG4_Ill_GATKHCSBGrefine_1330:HG4_Ill_250bpfermikitraw_2583:HG3_Ill_Krunchall_2636:HG3_Ill_GATKHC_3244:HG3_Ill_GATKHCSBGrefine_1288:HG3_Ill_250bpfermikitraw_2569:HG3_Ill_150bpfermikitraw_2485:HG4_PB_pbsv_1991:HG3_Ill_SVrefine2DISCOVARDovetail_1399:HG3_PB_pbsv_1970:HG4_PB_SVrefine2PBcRDovetail_1055;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2374:HG2_Ill_250bpfermikitraw_2576:HG2_Ill_GATKHCSBGrefine_1289:HG2_Ill_GATKHC_3150:HG2_Ill_SVrefine2DISCOVARplusDovetail_6647:HG2_Ill_manta_535:HG2_PB_SVrefine2Falcon1plusDovetail_6146:HG2_PB_SVrefine2Falcon2Bionano_758:HG2_PB_SVrefine2PBcRplusDovetail_5679:HG3_PB_SVrefine2PBcRDovetail_1041:HG4_Ill_150bpfermikitraw_2496:HG4_Ill_250bpfermikitraw_2584:HG4_Ill_GATKHCSBGrefine_1331:HG4_Ill_Krunchall_2723:HG4_Ill_SVrefine2DISCOVARDovetail_1433:HG4_Ill_manta_468:HG4_PB_SVrefine2Falcon1Dovetail_1185;NumExactMatchSVs=17;ClusterMaxShiftDist=0.150943;ClusterMaxSizeDiff=0.150943;ClusterMaxEditDist=0.150943;PBcalls=13;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=15;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=80809;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=101;REFWIDENED=2:72739437-72739589;PctSeqSimilarity=0.9608;PctSizeSimilarity=0.9231;PctRecOverlap=0.9245;SizeDiff=4;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=93;MatchId=1940.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:64:1/1:0:28:0:15:./.:0:16:1:2:./.:4:28:./.:.:.:.:.:.
chr2	75899293	HG2_PB_SVrefine2PBcRplusDovetail_5684	ATATATATTTATTTATAAAATATATATTTATATATTTATAAATATGTTTATAAAATATATATTTATATATT	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6656:HG3_PB_pbsv_1976:HG2_PB_pbsv_1992:HG4_PB_pbsv_1998:HG4_Ill_250bpfermikitraw_2600:HG4_Ill_150bpfermikitraw_2515:HG3_Ill_250bpfermikitraw_2588:HG3_Ill_150bpfermikitraw_2504:HG2_Ill_SpiralSDKrefine_8561:HG2_Ill_250bpfermikitraw_2595:HG2_Ill_150bpfermikitraw_2390:HG4_PB_SVrefine2PBcRDovetail_1059:HG4_PB_SVrefine2Falcon1Dovetail_1191:HG4_Ill_SVrefine2DISCOVARDovetail_1441:HG3_PB_SVrefine2PBcRDovetail_1047:HG3_PB_SVrefine2Falcon1Dovetail_1237:HG3_Ill_SVrefine2DISCOVARDovetail_1408:HG2_PB_SVrefine2PBcRplusDovetail_5684:HG2_PB_SVrefine2Falcon2Bionano_764:HG2_PB_SVrefine2Falcon1plusDovetail_6151;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6656:HG4_PB_SVrefine2PBcRDovetail_1059:HG4_PB_SVrefine2Falcon1Dovetail_1191:HG4_Ill_SVrefine2DISCOVARDovetail_1441:HG3_PB_SVrefine2PBcRDovetail_1047:HG3_PB_SVrefine2Falcon1Dovetail_1237:HG3_Ill_SVrefine2DISCOVARDovetail_1408:HG2_PB_SVrefine2PBcRplusDovetail_5684:HG2_PB_SVrefine2Falcon2Bionano_764:HG2_PB_SVrefine2Falcon1plusDovetail_6151;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0142857;ClusterMaxSizeDiff=0.0141844;ClusterMaxEditDist=0.0567376;PBcalls=10;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=0;DistForward=31;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=136;REFWIDENED=2:75899294-75899499;PctSeqSimilarity=0.975;PctSizeSimilarity=1;PctRecOverlap=0.8592;SizeDiff=0;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=94;MatchId=1941.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:77:1/1:3:47:5:27:./.:18:0:4:1:0/1:24:24:./.:.:.:.:.:.
chr2	75939167	HG2_PB_SVrefine2PBcRplusDovetail_5685	GTCTGGTGGGGACATAGAGAGTCTTTATGTCTAGCTCAGGGATTGTAAATACACCAATCAGCACTCTGTATCTGGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTTTAGCTCAAGGTTTATGAGTGCACCAATCGACACTCTGTATCTAGCTGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1514:HG3_PB_assemblyticsfalcon_13688:HG3_Ill_Krunchall_2654:HG3_PB_pbsv_1977:HG2_PB_HySA_3720:HG3_PB_SVrefine2PBcRDovetail_1049:HG3_PB_SVrefine2Falcon1Dovetail_1238:HG3_Ill_GATKHC_3271:HG3_Ill_GATKHCSBGrefine_1291:HG3_10X_allpass_359:HG2_Ill_GATKHC_3175:HG2_Ill_GATKHCSBGrefine_1293:HG2_10X_allpass_290:HG2_PB_pbsv_1993:HG3_PB_SVrefine2PBcRDovetail_1048:HG3_Ill_SVrefine2DISCOVARDovetail_1409:HG2_PB_SVrefine2PBcRplusDovetail_5685:HG2_PB_SVrefine2PB10Xhap12_1548:HG2_PB_SVrefine2Falcon2Bionano_765:HG2_PB_SVrefine2Falcon1plusDovetail_6152:HG2_Ill_SVrefine2DISCOVARplusDovetail_6657;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1514:HG3_PB_SVrefine2PBcRDovetail_1048:HG3_Ill_SVrefine2DISCOVARDovetail_1409:HG2_PB_SVrefine2PBcRplusDovetail_5685:HG2_PB_SVrefine2PB10Xhap12_1548:HG2_PB_SVrefine2Falcon2Bionano_765:HG2_PB_SVrefine2Falcon1plusDovetail_6152:HG2_Ill_SVrefine2DISCOVARplusDovetail_6657;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0186916;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.09375;PBcalls=11;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-160;DistBack=4298;DistForward=-112;DistMin=-112;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=181;REFWIDENED=2:75939168-75939508;PctSeqSimilarity=0.9511;PctSizeSimilarity=1;PctRecOverlap=0.4348;SizeDiff=0;StartDistance=-91;EndDistance=-91;GTMatch=0;TruScore=79;MatchId=1942.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:44:0|1:23:2:2:35:0/0:38:0:20:1:0/1:59:8:./.:.:.:.:.:.
chr2	76032928	HG3_10X_allpass_360	CCTTGGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCCACCGCGCCTGGCCTTTGTATTTTAATAGAGACAGTGTTTCACCGTGTTGCCCACGCTGGTCCCGAACTCCTGAGCTCAGGCAATCCGCCCCG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1515:HG3_PB_pbsv_1978:HG2_PB_pbsv_1994:HG3_Ill_svaba_2499:HG3_Ill_scalpel_1958:HG3_Ill_manta_414:HG3_Ill_GATKHC_3272:HG3_Ill_GATKHCSBGrefine_1292:HG3_10X_allpass_360:HG2_Ill_svaba_2410:HG2_Ill_scalpel_1839:HG2_Ill_GATKHC_3176:HG2_Ill_GATKHCSBGrefine_1294:HG2_10X_allpass_291:HG3_PB_HySA_3008:HG3_PB_SVrefine2PBcRDovetail_1050:HG3_Ill_SVrefine2DISCOVARDovetail_1410:HG2_PB_SVrefine2PBcRplusDovetail_5686:HG2_PB_SVrefine2PB10Xhap12_1549:HG2_PB_SVrefine2Falcon2Bionano_766;NumClusterSVs=20;ExactMatchIDs=HG2_10X_allpass_291:HG2_Ill_GATKHCSBGrefine_1294:HG2_Ill_GATKHC_3176:HG2_Ill_scalpel_1839:HG2_Ill_svaba_2410:HG3_10X_allpass_360:HG3_Ill_GATKHCSBGrefine_1292:HG3_Ill_GATKHC_3272:HG3_Ill_manta_414:HG3_Ill_scalpel_1958:HG3_Ill_svaba_2499;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0153846;ClusterMaxSizeDiff=0.0152672;ClusterMaxEditDist=0.138462;PBcalls=7;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-130;DistBack=35255;DistForward=-129;DistMin=-129;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=129;REFWIDENED=2:76032851-76033109;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1943.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:./.:8:18:13:2:0|1:32:0:0:12:0/1:25:15:./.:.:.:.:.:.
chr2	76526498	HG2_10X_SVrefine210Xhap12_1517	GGTTTTCCATGTTTTTTTTTTTTTTTAAATGTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGTTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTGTTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTGGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTCCTTTTGGCTTAGGATTGACTTGGAGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAA	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2525:HG2_Ill_Krunchall_2625:HG3_10X_allpass_361:HG2_10X_allpass_292:HG4_10X_allpass_334:HG4_PB_assemblyticsfalcon_13467:HG3_PB_assemblyticsfalcon_13696:HG2_PB_assemblyticsfalcon_13633:HG2_PB_assemblyticsPBcR_13221:HG4_PB_pbsv_2002:HG2_PB_HySA_3724:HG4_PB_SVrefine2PBcRDovetail_1060:HG4_PB_SVrefine2Falcon1Dovetail_1193:HG4_Ill_SVrefine2DISCOVARDovetail_1443:HG4_Ill_MetaSV_2612:HG4_Ill_GATKHCSBGrefine_1338:HG3_PB_pbsv_1983:HG3_PB_SVrefine2PBcRDovetail_1051:HG3_PB_SVrefine2Falcon1Dovetail_1241:HG3_Ill_SVrefine2DISCOVARDovetail_1411:HG3_Ill_MetaSV_2663:HG3_Ill_GATKHCSBGrefine_1296:HG2_PB_pbsv_1999:HG2_PB_SVrefine2PBcRplusDovetail_5687:HG2_PB_SVrefine2PB10Xhap12_1552:HG2_PB_SVrefine2Falcon2Bionano_769:HG2_PB_SVrefine2Falcon1plusDovetail_6154:HG2_Ill_SVrefine2DISCOVARplusDovetail_6660:HG2_Ill_GATKHCSBGrefine_1296:HG2_10X_SVrefine210Xhap12_1517:HG2_Ill_breakscan11_259:HG2_Ill_tnscope_202;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1517:HG2_Ill_GATKHCSBGrefine_1296:HG2_Ill_SVrefine2DISCOVARplusDovetail_6660:HG2_PB_SVrefine2Falcon1plusDovetail_6154:HG2_PB_SVrefine2Falcon2Bionano_769:HG2_PB_SVrefine2PB10Xhap12_1552:HG2_PB_SVrefine2PBcRplusDovetail_5687:HG2_PB_pbsv_1999:HG3_Ill_GATKHCSBGrefine_1296:HG3_Ill_MetaSV_2663:HG3_Ill_SVrefine2DISCOVARDovetail_1411:HG3_PB_SVrefine2Falcon1Dovetail_1241:HG3_PB_SVrefine2PBcRDovetail_1051:HG3_PB_pbsv_1983:HG4_Ill_GATKHCSBGrefine_1338:HG4_Ill_MetaSV_2612:HG4_Ill_SVrefine2DISCOVARDovetail_1443:HG4_PB_SVrefine2Falcon1Dovetail_1193:HG4_PB_SVrefine2PBcRDovetail_1060;NumExactMatchSVs=19;ClusterMaxShiftDist=0.011713;ClusterMaxSizeDiff=0.011713;ClusterMaxEditDist=0.011713;PBcalls=16;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2395;DistBack=65295;DistForward=12177;DistMin=12177;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=2:76526499-76528907;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1944.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:132:1/1:0:42:0:35:1/1:0:21:0:23:1/1:0:26:1/1:3:163:2501:.:.
chr2	76557056	HG3_10X_allpass_362	CTATTTTCTTTTAGTTGTAATTATTTTTTATTTATTTGATCAATATTTATTGTGTGCCTGTCACGTGTGAGGCACTTTACTAGCTGCTGGGAATCTGTACATGAGGAAAACACAGTCTCTGCTTTCAAGTAACTTGCATTGTTATGGAAATAGATTGAAATGTGAAATGTCAACCTGAGACAACTGGTTACATGTTCTGCTTGCCTTTTGACACAAAGATATTGTTTTTGAATCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1518:HG2_PB_pbsv_2000:HG2_Ill_tnscope_203:HG3_PB_pbsv_1984:HG3_PB_assemblyticsfalcon_13697:HG3_PB_SVrefine2Falcon1Dovetail_1242:HG3_Ill_scalpel_1959:HG3_Ill_manta_415:HG3_Ill_MetaSV_2664:HG3_Ill_GATKHCSBGrefine_1297:HG3_10X_allpass_362:HG2_Ill_manta_536:HG2_Ill_breakscan11_260:HG2_Ill_SpiralSDKrefine_8564:HG2_Ill_GATKHCSBGrefine_1297:HG2_10X_allpass_293:HG2_PB_assemblyticsfalcon_13634:HG2_PB_assemblyticsPBcR_13222:HG2_PB_PB10Xdip_17765:HG2_PB_PB10Xdip_17764:HG2_PB_SVrefine2PB10Xhap12_1554:HG2_PB_SVrefine2PBcRplusDovetail_5688:HG2_PB_SVrefine2PB10Xhap12_1553:HG2_PB_SVrefine2Falcon2Bionano_770:HG2_PB_SVrefine2Falcon1plusDovetail_6155:HG2_Ill_SVrefine2DISCOVARplusDovetail_6661;NumClusterSVs=26;ExactMatchIDs=HG2_PB_PB10Xdip_17765:HG2_10X_allpass_293:HG2_Ill_GATKHCSBGrefine_1297:HG2_Ill_SpiralSDKrefine_8564:HG2_Ill_breakscan11_260:HG2_Ill_manta_536:HG3_10X_allpass_362:HG3_Ill_GATKHCSBGrefine_1297:HG3_Ill_MetaSV_2664:HG3_Ill_manta_415:HG3_Ill_scalpel_1959:HG3_PB_SVrefine2Falcon1Dovetail_1242:HG3_PB_assemblyticsfalcon_13697:HG3_PB_pbsv_1984;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0429185;ClusterMaxSizeDiff=0.0429185;ClusterMaxEditDist=0.0429185;PBcalls=13;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-234;DistBack=-315;DistForward=2531;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=0/0;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:76557057-76557291;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1945.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:30:./.:27:8:6:14:0|1:44:1:0:13:0/1:28:17:./.:.:.:.:.:.
chr2	76773554	HG2_PB_SVrefine2Falcon1plusDovetail_6156	AATCTTATAATAACAATTAATAAATTAATTAATAATCTTATAATAATTATAAATTACTAGTATTTTTTTCTCCAAAGTATTGCAGGTGTTCTACTGAGGAACACTATGTCCATTTTGGGAAAGAGGAAAATCTTTGAGAAAAAAATGCCTCAACTATGTCTAGCAGTTTTAACAACTAGATACAGAAAGAGAAGTCATAGATGGGATAGCATCAATTCATGTATTAGAGTGGTGAGGATCATGTTCAGTGTGGCATTTGTGGCATGTACATTAATGTGGGATTCATGTAATGGGACATTTCCAGTGCATGCTCTCAGTGGAGTATCACATGCAGTTAGGTAGGCCCAAATAACAGAGTGCTTTTTAAACACAGTAGAGCAGTAGACGTTATCCTCTAGGGAAAGGACAAAGGGAACAGACAAAGGATTTGAAGTTTGGGAGTCACATGGGCCTTTTGATAGTCAGAAAATACCTGAACAGATCATTTGTTCAAGGAAAAAAAAAAGGTTGCTCTGACTGGGAAAGTAGAGAATGATAAAACAAGGGTTAGACTTAAAGCAGTGAAAGCAGTTAGGAACTGTTCAGATCAAAGATTGTGAGTGTCTGAAATGGAAGGAAAAGTGGAATAGATAGGATTGGGGCAGGCTTTAAAATGATTTTCAAAAATAAGTTCCGGATTTTACCTAGTGCCTACTGGAAAGGTGTCTGGGGTGGGTCTTGAATTTCTGGCTTGATTGCTGCCTGGATGGGGGTACAATAAAGGGAGTGTGAAGACAGGAGCAGTTACAGGTAGGACAGAGAAAATGCACTCACTTTTGAACACGTTGAGTTTGATATCTATTTAAATGACTAGACATGGTTACTTAATTAGACATGTCCAGCAGGTAGTTGTATATTCAAGTTTGGAGATCAGGATTGAAGATATATATTGTATTTTTAAAGATTTTTATATATGTGAGTTTTCAAACTATGAAAGTGAATGAAATTGATAAGGAGAATAATAGGTGAAGCAAACAAAAATGTGAGCAGAATGATTGTGAGGCAAAGCAAACAAACAAACAAAAAAGTTTTTGTGTTAAAGCCTAAAAGAAGAACTGATTTTGCAGTTCTGGTTCAAATGAACCATCCTAAGAAAATAAAATGGAGCAAAGATGTGGAATCCTGGTGAACTATGATCTACATCAAAACATGACCCAAAAGGAAATTAGGCATGTTGGTATGGCAGGTGTAATTGCTATTCTGCATGGTGCTACATATGATTGTCCTCTCTTTATCTATCCATTATTACATGTTTAAAAATGATTAACCTAATTAAATGCAGATCTATCTGTTAAGGCAAACAGAAATTTTAACTGATCACATGCTCTTATTGGTCTTTGAACTAATATGGAATATAGACGCAATTGGATTCCTTTGCCAGTGTCAACATCAATTACATCGAAATAGAAGTGTGGTATTCACCACTGGAAATTGATCCTTCTTAGATAATTCTACACAGCAGGACAATGCCCTTAGCAAATGATGATGTTGTATGAGCCACAGGCAGCTATTTCCATGCGTGTAGCAGGGTGCTGGCATTTAAAAAAAAGATTTTGCCGCCCAATAACACTTACATGATATAAACATTTGGGGTCACATATAATAAATATTGAGGTCAAACACACAAAGATAATATGCTTCTTTTGCCTCAAATTTTGTAGAGAACAGCAGTCAGACAATGCTAGCTGGGATGACAGATACTTCAAAATAGTACCTGCATAACTACTGTGATGCTTGATGACATTCGTCCCATTTAGTATAATTGACGCCAGCCAAGAAAAAAAAATCACTACTGTTGTAATAAGCATTTATATAGAACTTATTTTGGCAGGCTGTCTTCTGGAATCTTCATATAAATTT	TTATTCTTTTA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1052:HG4_Ill_GATKHCSBGrefine_1340:HG3_Ill_GATKHCSBGrefine_1299:HG2_Ill_GATKHCSBGrefine_1299:HG3_PB_pbsv_1985:HG4_PB_assemblyticsfalcon_13473:HG4_PB_SVrefine2PBcRDovetail_1061:HG4_PB_SVrefine2Falcon1Dovetail_1194:HG4_Ill_SVrefine2DISCOVARDovetail_1444:HG3_PB_assemblyticsfalcon_13701:HG3_PB_SVrefine2Falcon1Dovetail_1243:HG2_PB_assemblyticsfalcon_13638:HG2_PB_assemblyticsPBcR_13227:HG2_PB_SVrefine2PBcRplusDovetail_5689:HG2_PB_SVrefine2PB10Xhap12_1555:HG2_PB_SVrefine2Falcon2Bionano_771:HG2_PB_SVrefine2Falcon1plusDovetail_6156:HG2_PB_PB10Xdip_17766:HG2_Ill_SVrefine2DISCOVARplusDovetail_6662:HG2_10X_SVrefine210Xhap12_1519:HG2_Ill_SpiralSDKrefine_8567:HG2_10X_allpass_294:HG2_Ill_tnscope_204:HG4_10X_allpass_335:HG2_PB_pbsv_2002:HG2_Ill_MetaSV_2527:HG4_Ill_Krunchall_2746:HG3_Ill_Krunchall_2659:HG2_Ill_Krunchall_2628:HG4_Ill_MetaSV_2613:HG3_Ill_MetaSV_2665:HG3_10X_allpass_363:HG4_PB_pbsv_2004;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1519:HG2_Ill_SVrefine2DISCOVARplusDovetail_6662:HG2_PB_PB10Xdip_17766:HG2_PB_SVrefine2Falcon1plusDovetail_6156:HG2_PB_SVrefine2Falcon2Bionano_771:HG2_PB_SVrefine2PB10Xhap12_1555:HG2_PB_SVrefine2PBcRplusDovetail_5689:HG2_PB_assemblyticsPBcR_13227:HG2_PB_assemblyticsfalcon_13638:HG3_PB_SVrefine2Falcon1Dovetail_1243:HG3_PB_assemblyticsfalcon_13701:HG4_Ill_SVrefine2DISCOVARDovetail_1444:HG4_PB_SVrefine2Falcon1Dovetail_1194:HG4_PB_SVrefine2PBcRDovetail_1061:HG4_PB_assemblyticsfalcon_13473;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0361029;ClusterMaxSizeDiff=0.0361029;ClusterMaxEditDist=0.0490859;PBcalls=16;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1888;DistBack=18452;DistForward=-1892;DistMin=-1892;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:76773554-76775452;PctSeqSimilarity=0.9664;PctSizeSimilarity=0.9984;PctRecOverlap=0.9963;SizeDiff=-3;StartDistance=-4;EndDistance=3;GTMatch=0;TruScore=98;MatchId=1946.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:109:./.:0:0:0:1:1/1:0:11:0:8:1/1:0:41:1/1:2:105:1830:.:.
chr2	77976767	HG4_Ill_GATKHCSBGrefine_1347	TAAGAGTCCAAAATTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1523:HG4_10X_allpass_338:HG4_PB_pbsv_2014:HG4_Ill_Krunchall_2757:HG2_Ill_Krunchall_2640:HG2_PB_assemblyticsPBcR_13240:HG2_PB_pbsv_2009:HG4_Ill_MetaSV_2616:HG2_PB_HySA_3739:HG2_Ill_tnscope_205:HG4_PB_HySA_2960:HG4_Ill_manta_472:HG4_Ill_GATKHCSBGrefine_1347:HG2_Ill_manta_542:HG2_Ill_GATKHCSBGrefine_1303:HG2_10X_allpass_296:HG4_Ill_SVrefine2DISCOVARDovetail_1451:HG2_PB_SVrefine2PBcRplusDovetail_5692:HG2_PB_SVrefine2Falcon2Bionano_774:HG2_PB_SVrefine2Falcon1plusDovetail_6158;NumClusterSVs=20;ExactMatchIDs=HG2_10X_allpass_296:HG2_Ill_GATKHCSBGrefine_1303:HG2_Ill_manta_542:HG4_Ill_GATKHCSBGrefine_1347:HG4_Ill_manta_472:HG4_PB_HySA_2960;NumExactMatchSVs=6;ClusterMaxShiftDist=0.129952;ClusterMaxSizeDiff=0.129952;ClusterMaxEditDist=0.129952;PBcalls=8;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=3841;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=2:77976764-77977108;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1947.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:32:0|1:27:0:1:29:1|0:0:21:40:0:0/1:29:17:0/1:16:7:.:.:.
chr2	78117890	HG2_PB_assemblyticsfalcon_13649	AAAAGCCTGATAAACCAAACTAAGCTAACAAATCAAAGTTACTTCACTAGTGCAAAGGAATTACGGGTGAAAATGAGACCCATAGAAAACATGATATAAATGCACTCTTTGTCTTCCTATGTTTGGCTTATTTCACTTAGTAAAATGTTCTCTAATTCCATCCATGTTTTTGCAAAGAACAGAATTTTCTTTTTTTTTAAGGCATAATAGTATTCCATTGTGTATATGTATCACACTTTACCCATTCATCCATCGATAGACATTTTGGTTGATTCTGTATCTTGGCTATTGTGAGTAGTGCTGCCGTGAACATGGAAGTGCCCATACCTCTCTGACATGCTGATTTTAAATCTATTGGGTATATACTCAGAAGTGGAGTTTCTGGATCATACAGTAATTCTATTTTTAGTTTTTTGAGGGACCTTCATACTGTCTTTCATGATGGTTTTACTGATTTACATTTCTACC	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_2642:HG4_Ill_Krunchall_2761:HG4_PB_assemblyticsfalcon_13484:HG4_PB_SVrefine2Falcon1Dovetail_1198:HG4_PB_SVrefine2PBcRDovetail_1068:HG4_Ill_manta_474:HG4_Ill_MetaSV_2617:HG4_Ill_GATKHCSBGrefine_1349:HG4_10X_allpass_339:HG3_PB_assemblyticsfalcon_13712:HG3_PB_SVrefine2Falcon1Dovetail_1247:HG2_PB_assemblyticsfalcon_13649:HG2_PB_assemblyticsPBcR_13245:HG2_PB_SVrefine2PBcRplusDovetail_5694:HG2_PB_SVrefine2Falcon2Bionano_775:HG2_PB_SVrefine2Falcon1plusDovetail_6159:HG2_Ill_manta_543:HG2_Ill_breakscan11_261:HG2_Ill_SpiralSDKrefine_8575:HG2_Ill_GATKHCSBGrefine_1305:HG2_10X_allpass_297:HG2_10X_SVrefine210Xhap12_1524:HG4_Ill_Spiral_151:HG2_Ill_tnscope_206:HG2_Ill_Spiral_120:HG2_Ill_MetaSV_2531:HG4_PB_pbsv_2016:HG2_PB_pbsv_2011:HG4_Ill_Krunchall_2760;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1524:HG2_10X_allpass_297:HG2_Ill_GATKHCSBGrefine_1305:HG2_Ill_SpiralSDKrefine_8575:HG2_Ill_breakscan11_261:HG2_Ill_manta_543:HG2_PB_SVrefine2Falcon1plusDovetail_6159:HG2_PB_SVrefine2Falcon2Bionano_775:HG2_PB_SVrefine2PBcRplusDovetail_5694:HG2_PB_assemblyticsPBcR_13245:HG2_PB_assemblyticsfalcon_13649:HG3_PB_SVrefine2Falcon1Dovetail_1247:HG3_PB_assemblyticsfalcon_13712:HG4_10X_allpass_339:HG4_Ill_GATKHCSBGrefine_1349:HG4_Ill_MetaSV_2617:HG4_Ill_manta_474:HG4_PB_SVrefine2PBcRDovetail_1068;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0233298;ClusterMaxSizeDiff=0.0233298;ClusterMaxEditDist=0.201271;PBcalls=12;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-467;DistBack=30745;DistForward=-467;DistMin=-467;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:78117891-78118358;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1948.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:34:0|1:40:0:1:33:1|0:0:25:47:0:0/1:64:23:0/1:42:11:.:.:.
chr2	78785986	HG2_Ill_scalpel_1848	CCACAGTAATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATT	C	20	PASS	ClusterIDs=HG4_Ill_MetaSV_2619:HG4_PB_HySA_2964:HG2_Ill_Krunchall_2647:HG4_Ill_Spiral_152:HG2_Ill_Spiral_121:HG4_PB_pbsv_2018:HG2_PB_pbsv_2013:HG2_Ill_breakscan11_262:HG4_PB_SVrefine2PBcRDovetail_1070:HG4_PB_SVrefine2Falcon1Dovetail_1199:HG4_Ill_svaba_2467:HG4_Ill_scalpel_1796:HG4_Ill_manta_476:HG4_Ill_SVrefine2DISCOVARDovetail_1454:HG4_Ill_GATKHCSBGrefine_1351:HG4_Ill_250bpfermikitraw_2630:HG4_Ill_150bpfermikitraw_2543:HG4_CG_vcfBeta_1298:HG4_10X_allpass_340:HG2_Ill_svaba_2435:HG2_Ill_scalpel_1848:HG2_Ill_manta_545:HG2_Ill_SVrefine2DISCOVARplusDovetail_6670:HG2_Ill_GATKHCSBGrefine_1307:HG2_10X_SVrefine210Xhap12_1527;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1527:HG2_Ill_GATKHCSBGrefine_1307:HG2_Ill_SVrefine2DISCOVARplusDovetail_6670:HG2_Ill_manta_545:HG2_Ill_scalpel_1848:HG2_Ill_svaba_2435:HG4_10X_allpass_340:HG4_CG_vcfBeta_1298:HG4_Ill_150bpfermikitraw_2543:HG4_Ill_250bpfermikitraw_2630:HG4_Ill_GATKHCSBGrefine_1351:HG4_Ill_SVrefine2DISCOVARDovetail_1454:HG4_Ill_manta_476:HG4_Ill_scalpel_1796:HG4_Ill_svaba_2467:HG4_PB_SVrefine2Falcon1Dovetail_1199:HG4_PB_SVrefine2PBcRDovetail_1070;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0149254;ClusterMaxSizeDiff=0.0149254;ClusterMaxEditDist=0.0150376;PBcalls=5;Illcalls=17;TenXcalls=2;CGcalls=1;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=1;HG2count=10;HG3count=0;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-133;DistBack=41875;DistForward=-119;DistMin=-119;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:78785987-78786135;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1949.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:28:0|1:44:4:0:24:1|0:0:17:34:0:0/1:17:15:./.:.:.:.:.:.
chr2	78820292	HG3_PB_SVrefine2Falcon1Dovetail_1249	TTTCCTTCCGTCCTTCCTCCCTCCCTTTTCTTCCTTCCTTCCTCCCTCCCTCCTCTCCTTCCTTCCTTCCTCTCTCCCTCCCTCCCTCCTTTCCTTCCTCCCTCCCTCCTTTCCTTCCTCCCTCCCTCCCTCCTCTCCTTCC	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1200:HG4_Ill_Krunchall_2766:HG2_PB_HySA_3746:HG2_PB_pbsv_2014:HG4_PB_pbsv_2019:HG4_PB_HySA_2965:HG4_Ill_GATKHCSBGrefine_1352:HG4_Ill_250bpfermikitraw_2631:HG4_Ill_150bpfermikitraw_2544:HG4_10X_allpass_341:HG2_Ill_SpiralSDKrefine_8580:HG2_Ill_GATKHCSBGrefine_1308:HG4_PB_SVrefine2PBcRDovetail_1071:HG4_Ill_SVrefine2DISCOVARDovetail_1455:HG3_PB_SVrefine2Falcon1Dovetail_1249:HG2_PB_SVrefine2PBcRplusDovetail_5696:HG2_PB_SVrefine2PB10Xhap12_1559:HG2_Ill_SVrefine2DISCOVARplusDovetail_6671:HG2_10X_SVrefine210Xhap12_1528;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1528:HG2_Ill_SVrefine2DISCOVARplusDovetail_6671:HG2_PB_SVrefine2PB10Xhap12_1559:HG2_PB_SVrefine2PBcRplusDovetail_5696:HG3_PB_SVrefine2Falcon1Dovetail_1249:HG4_Ill_SVrefine2DISCOVARDovetail_1455:HG4_PB_SVrefine2PBcRDovetail_1071;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0213523;ClusterMaxSizeDiff=0.0213523;ClusterMaxEditDist=0.0857143;PBcalls=9;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-141;DistBack=19013;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=105;REFWIDENED=2:78820293-78820538;PctSeqSimilarity=0.9605;PctSizeSimilarity=0.9929;PctRecOverlap=0.7254;SizeDiff=1;StartDistance=-39;EndDistance=-38;GTMatch=0;TruScore=89;MatchId=1950.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:42:0|1:17:3:1:33:0/0:24:2:40:1:0/1:13:9:./.:.:.:.:.:.
chr2	79057647	HG2_PB_SVrefine2Falcon2Bionano_778	TATGAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1530:HG4_PB_HySA_2969:HG2_PB_assemblyticsPBcR_13254:HG4_Ill_Krunchall_2768:HG3_Ill_Krunchall_2677:HG2_Ill_Krunchall_2650:HG2_PB_PB10Xdip_17776:HG3_PB_pbsv_1993:HG4_PB_pbsv_2021:HG4_Ill_MetaSV_2621:HG2_Ill_tnscope_207:HG4_PB_SVrefine2PBcRDovetail_1072:HG4_Ill_scalpel_1797:HG4_Ill_manta_477:HG4_Ill_GATKHCSBGrefine_1355:HG4_10X_allpass_342:HG3_Ill_scalpel_1971:HG3_Ill_manta_419:HG3_Ill_MetaSV_2669:HG3_Ill_GATKHCSBGrefine_1308:HG3_10X_allpass_365:HG2_PB_pbsv_2016:HG2_PB_assemblyticsfalcon_13658:HG2_PB_SVrefine2PBcRplusDovetail_5697:HG2_PB_SVrefine2PB10Xhap12_1560:HG2_PB_SVrefine2Falcon2Bionano_778:HG2_PB_SVrefine2Falcon1plusDovetail_6162:HG2_Ill_scalpel_1849:HG2_Ill_SVrefine2DISCOVARplusDovetail_6672:HG2_Ill_MetaSV_2533:HG2_Ill_GATKHCSBGrefine_1311:HG2_10X_allpass_298;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1530:HG4_PB_SVrefine2PBcRDovetail_1072:HG4_Ill_scalpel_1797:HG4_Ill_manta_477:HG4_Ill_GATKHCSBGrefine_1355:HG4_10X_allpass_342:HG3_Ill_scalpel_1971:HG3_Ill_manta_419:HG3_Ill_MetaSV_2669:HG3_Ill_GATKHCSBGrefine_1308:HG3_10X_allpass_365:HG2_PB_pbsv_2016:HG2_PB_assemblyticsfalcon_13658:HG2_PB_SVrefine2PBcRplusDovetail_5697:HG2_PB_SVrefine2PB10Xhap12_1560:HG2_PB_SVrefine2Falcon2Bionano_778:HG2_PB_SVrefine2Falcon1plusDovetail_6162:HG2_Ill_scalpel_1849:HG2_Ill_SVrefine2DISCOVARplusDovetail_6672:HG2_Ill_MetaSV_2533:HG2_Ill_GATKHCSBGrefine_1311:HG2_10X_allpass_298;NumExactMatchSVs=22;ClusterMaxShiftDist=0.101227;ClusterMaxSizeDiff=0.101227;ClusterMaxEditDist=0.101227;PBcalls=12;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=92235;DistForward=-329;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=2:79057648-79057994;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1951.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:39:0|1:37:0:2:37:0|1:41:0:0:27:0/1:18:23:0/1:16:8:.:.:.
chr2	79076570	HG4_PB_SVrefine2Falcon1Dovetail_1202	ATTATTTTTATTACCATGTGGTCCTAAGTAATTTCTTTTTCCTCGCAGGTTATCTTCTTTGATAAATTGAGAAGACTGCTTTAAATATTTCTCCCAAAAATAATGTCCCCTTCACAGTTTTTGCTGCTCTTGTCCTTTAATTATGCTGTACACAACACCGTGGTATGTGTGTGCATGAAACTGAACATTTGATATTTAAGAATTGTTTTTCAACCTAGAGTTTGAACATCATTTATAAGTGTTCCATATGTGTTTGGGAAAAATGCATATTCTCAAATTGTTTGGTAAAGATTTCTAAATATCTATTAAATTACTCCTAATTGTGCTGTGCAGATCTTCCGTGTGTGTGTGTGTGTGTTCTTCTGCCCAATCTCTCAATTATTGAGAAAGGAGTGTGGCTGATTGGTAGTTTTATAAATTTTTACATTATATGTTTTGAGGTTACTTTTTAAACCCCCTCATATGAAACTGTAAATTTCTTGGTGAATTAAATATTTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAAGCTCTGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAATAGCTGGGACTACGGGTGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGAGCCTCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACCGCGCCCGGCCAAATAGTTTTCATTTTACAGTAACCCTCTTTCTTCTACGCATCATTTTATTCTAAAATCTAAATTGTCCGATATTAAAATAGCTACTCTAACTTCTGTTTGGCTTATATGAAATTTGTAACTTTTCCATTATTTTACTTCTGTCTGTGTCTGTTTTCCTTATAGAGAGTATAGAGTTAGATTTTTAAAAACCTAACCTTACAGCCTTTACCTTTATATGTATTATCATTGCTGATGTGTTTGTTTTATCGATTGAGCTTTTGACTTTTCTATTAATGTCTCTCCTACTTTTTAAATACTTCATTTTTATTTCTATATAAATAAACTTCCGTTGGATTAATTGGGTCCCTATTTTCTTACTCTAAGTTTTACTTCTACAGGTTTGAAAGCTACATATATCAATATTTAGTCTTTTAGTGGCTATTTTGGCATACTTAAATTTATAAAGTTTCAATTAAATGAATATTTTATGTCTTTCTCTCAGAAAATAAAAGATTATCATATTTTAACTCTACTCAACCGTTCTCAGGATATATTCTACAGACACCAATAGACATTTTCTTATGTTTATCAGTTTCTTTATATACTCTTGCATCTCAAAGCTTCCTGTTAGTTAGGAATTGCATTTGGCTCCTAGAATTAGGTTGGTACAAAAGTAATTGCAGTTTTTGCCATTCCTTTTAAATTATTGCCATTACTTACTAAATTATGCCATTATATTTTAAATTTTAAAAGTAAATTTGCAATTACTTTTCCAGTGCCATAAAAATGTATATAATCATGACACAGAAGATTGGCGATAAGCAGTTCAGAGACGTGCTATGACTCCACAAACTCATTAGGACTTGTAAAAGAAAAATCAGCAAGACAAAATGAACAGATGAAAAGCGATTTTATTCTGATACTATTGCCAGCCACAGGAGAGAAAGCACAGACCAAGTCTGGATTCTTACTCCACTGAAACAAAGAGCAGGGGAGTTTTTGAGGAGCCAGGGTGGGGGTTGTCATAGGCCATATATGTTTGTTGATTAGCTTTTCTCAGAGGAAAAGTAGACTTTCTTCTATCTTCATGACAAGGCTTGCAGCCAGGAAGAAGCCTGTCTAGAACTTGGTCAATTTGAGGGAAACATTAAGGACATCTTTTTCAAGATCCAGAATTTTCTAAGTTTTTGCCAACCTATCTTTCGTGTGTTGTTTCCATTTTCAAAGTCACAAGAGAGCTGTAGTACTCAACCCATGGTGTTTGTGTTCCAGATTGGAAAGAAAAGGGCAAAAAAGAAAATGGCAGCCCTTATGACTGATCAGCCATCTTAAAAAGAATTACCAAAAGCCGTACCCAGCAACTTCTCTTGACATGCCCTAGTCCACTTTAACCTTCAAAAGAGACTGAAAAATGTGTGCTTTTAGCTGTGAATGAAATCAGACCAGAGTAACATAAGTAAGAATTCTGTACTAAGGAGGAAAATGAAATCGAAATTGGTGGTCAAGATAGTCTCCATGACAGCCCTATTTAACTATTCACATCTCTGCATACACTTCTTCCACTCATGAAATAGGCTTATTTCCATTTCAAAAGGTAAGAAGCAGTTTCTGCATCTGTATCCAGCTCAAAGTTCACGTAATGTACAGCCCTTTCAGTCATGTCTACAGGCAGCTTCTGTGGTCCAACTAACTATAAATTGAGGATATTTTGGGGATCCTCCACCCTGGGACACTTAATACAAGAGGGAAAAAGTATAAGAGGAAAATAAGTAGCTGTAGTAAAAACTTCCACGTGGTACAGAGAAAAATGGGAACCATACAACCATCAGTGTGCCAGAGCAATTAACCCAACCTGATTGGAAGGAATAGTGAGAACTCCTTTTCTTGGCAATGGAGTACATTCTATGATTAACCCATCTGACAATCTCTGGTTCTGTTTTCCATTTCCCTCCATGGCCTCTGGCCCTTCCATCTGAGAGGTACATCTGTCCGTTTTCTCTCACGCTCTCAACAAGGTGGGTATTGGCAAAGTTGCCCTTCCTGGGGGCTGCAAAGCTTTACAGTTTAATTCCTATTAGTGGAAGTCTGGAGGCCTAGGATTGTTTGGGTAATTAGGCCGTGAGAAGATATTATATGCCTGGCTTGGAGAATCTTCAGAAATATTTTCTCAAAACTTGGTGAGTTCTCAGTGTAATTACTTCTGGCCGGGCCCATCTTCAAGTAAATACAGCCCACAGTCTTGACTAAACATGGTTTTTAAGTCTGAGCATTCATGTTTAACTCAGTGGCCTTATACTTTGCCCATTTCCTAAACTCCAAAATTAATGGTGACTACTTCAAGATCATTGAAAATAAAAGGCTGCATAAGGAAGCAATACCATTAATCTGACCATTGACTCTACGCGGTGTGTGATTATTCTACCAGAAATTTTCCCACTTGATCCATTAGACTCTGAAGTATTTATATGTTAAACTTATTCCTGTTATATTGCCAATGTCCTTGAGAAGTGTTATGGAGCCCCAGGGTCTTCATCTATGAAATGCAAATAATCCCCCAAATACTGCTGCATTTGCATACTTTGAAGCAACACACAAACAAAACAAATTATTAGAAGATGCTGGAAAGTCAAGAGAGCAGTGATGAAAGAAAGAAAAAAAAAACACAGAAAATAATAACTTTCTTTTAGAAATTTCTCTTGTATTTGTACTTCTCTAGGTAAGTGAAAAAGCACAACACTGAATTTAGGTGTTTTTTCCAAAAATTTATACTAATATAATGATGATGACAATGACAATAATGATGTCAATGGTGAATAAGTCTTATAGCTGGGCACCATGCTAAGATCTTCACATGAAATATATCAATTCATTTTTAGGACAATCTGCTGCGTCATGTTTTGGAAGCCTGCTACCAGAGTCTCTGATGTGGTCTAGGAATAAAATATTTAAATTATTTTATGTTTGAACAGTTCCTGTGCATTTACATGGAAATGAGATCTATAGTAAAGAAACAAAAGGCATGCATATATAGTTGACACGTACTGAAATGTGTATGACCTCTTTTTATTTTTGTTATTTTAATTTTGGGTGTTTATGCAGCACTTTAAGACCTCATGATCCTCCAAGGACTTTTTATTAAAATCCATCTACTGTTGATCCTTTTATAATGGACAACTCTGCCTGTTCCAGCTGTCACTGTAGCAACAAGATGTGTATTAACCATGACTTTCAAGCCAGAAAGTTTCACATTTGTTTTGACAGCCTACAGTGAATTCTCTACCAAAAGCAATTTCTTGTGAGACTATTACAAGCAAGTCCTTGCAAAGTGGAAAGTCTGGGGAACTTTGGATGTGAGGACGTGCCTTCTCTGTATGGAAAGGTATTGCATTGTTGACCAAGGCTGTTGCCTACCAAATGAACTATTTTATAAATCCAGTTGGTTTTCAAGATAATGAGCTTAGCTTTCAAAATACCTTTCTCAGGTTGAGACAGTTAAAATGTAGAAAAGATGAACAGAATTCTGTCACTTGTAAAATGTAACTTGTGTCAATGATTTTCTTGTCACAGAATTTTTTGCAATAGGAAATAAAATAGAGGCTGGTAGAAAAGAGGTATACATTACCCTGTTTATGTGGAGAAAGATACTGTGATGTTGCCAAAGGTAGAAAGCACACAAAAGAAAAAATGTCAATAATTGGCTACATAAAAAGTAAAAGAGTGAACTCCTTTGTGAGTATGTGTATGTGTGTGTGAGAAAGAGAAAATGCTAGCAATAAACAGATAAAACTACATCTAACATTTGACATAAATAAAATGTTTTATGTTTTTTAATAGCAGGTAATTTT	A	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2670:HG4_10X_allpass_343:HG2_PB_pbsv_2017:HG3_PB_assemblyticsfalcon_13718:HG2_Ill_tnscope_208:HG4_PB_pbsv_2022:HG4_PB_SVrefine2PBcRDovetail_1073:HG4_PB_SVrefine2Falcon1Dovetail_1202:HG4_Ill_MetaSV_2622:HG3_PB_pbsv_1994:HG3_PB_SVrefine2PBcRDovetail_1054:HG2_PB_SVrefine2PBcRplusDovetail_5698:HG2_PB_SVrefine2PB10Xhap12_1561:HG2_PB_SVrefine2Falcon2Bionano_779:HG2_Ill_SpiralSDKrefine_8581:HG2_Ill_SVrefine2DISCOVARplusDovetail_6673:HG2_Ill_MetaSV_2534:HG2_10X_SVrefine210Xhap12_1531:HG4_Ill_Krunchall_2769:HG2_Ill_Krunchall_2651:HG2_10X_allpass_299;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1531:HG2_Ill_MetaSV_2534:HG2_Ill_SVrefine2DISCOVARplusDovetail_6673:HG2_Ill_SpiralSDKrefine_8581:HG2_PB_SVrefine2Falcon2Bionano_779:HG2_PB_SVrefine2PB10Xhap12_1561:HG2_PB_SVrefine2PBcRplusDovetail_5698:HG3_PB_SVrefine2PBcRDovetail_1054:HG3_PB_pbsv_1994:HG4_Ill_MetaSV_2622:HG4_PB_SVrefine2Falcon1Dovetail_1202:HG4_PB_SVrefine2PBcRDovetail_1073:HG4_PB_pbsv_2022;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0335291;ClusterMaxSizeDiff=0.0335291;ClusterMaxEditDist=0.0335291;PBcalls=10;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-4636;DistBack=18911;DistForward=-4636;DistMin=-4636;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:79076571-79081208;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1952.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:61:0|1:52:0:0:32:0|1:60:0:0:49:0/1:55:18:0/1:282:154:4604:.:.
chr2	80994502	HG3_Ill_GATKHCSBGrefine_1311	ATATATAATATATATTGTATTATTATATATATTATATATAATATATATTGTATATTATATATAT	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_1313:HG4_Ill_GATKHC_3217:HG3_Ill_GATKHCSBGrefine_1311:HG2_Ill_GATKHC_3225:HG3_PB_pbsv_1998:HG4_PB_pbsv_2025:HG2_PB_pbsv_2018:HG4_Ill_GATKHCSBGrefine_1359;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_3225:HG3_Ill_GATKHCSBGrefine_1311:HG4_Ill_GATKHC_3217;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0763359;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.110236;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-63;DistBack=-20;DistForward=47;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=503;REFWIDENED=2:80994357-80994922;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1953.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:15:44:./.:1:0:0:0:./.:0:1:0:0:1/1:0:21:./.:.:.:.:.:.
chr2	82340445	HG2_Ill_scalpel_1875	ATATTTTAACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1541:HG2_PB_HySA_3779:HG3_PB_assemblyticsfalcon_13744:HG4_PB_assemblyticsfalcon_13519:HG2_PB_assemblyticsfalcon_13684:HG2_PB_assemblyticsPBcR_13287:HG4_Ill_Krunchall_2810:HG3_Ill_Krunchall_2716:HG2_Ill_Krunchall_2690:HG4_Ill_Spiral_153:HG3_Ill_Spiral_2103:HG2_Ill_Spiral_122:HG3_PB_pbsv_2009:HG4_PB_pbsv_2032:HG2_PB_pbsv_2023:HG4_PB_HySA_3003:HG4_Ill_MetaSV_2626:HG3_Ill_MetaSV_2674:HG2_Ill_tnscope_209:HG2_Ill_MetaSV_2536:HG4_PB_SVrefine2PBcRDovetail_1081:HG4_PB_SVrefine2Falcon1Dovetail_1210:HG4_Ill_scalpel_1819:HG4_Ill_manta_479:HG4_Ill_SVrefine2DISCOVARDovetail_1462:HG4_Ill_GATKHCSBGrefine_1363:HG4_10X_allpass_344:HG3_PB_SVrefine2PBcRDovetail_1060:HG3_PB_SVrefine2Falcon1Dovetail_1256:HG3_Ill_scalpel_1999:HG3_Ill_GATKHCSBGrefine_1325:HG3_10X_allpass_368:HG2_PB_SVrefine2PBcRplusDovetail_5703:HG2_PB_SVrefine2Falcon2Bionano_784:HG2_PB_SVrefine2Falcon1plusDovetail_6169:HG2_Ill_scalpel_1875:HG2_Ill_manta_549:HG2_Ill_breakscan11_263:HG2_Ill_SVrefine2DISCOVARplusDovetail_6683:HG2_Ill_GATKHCSBGrefine_1318:HG2_10X_allpass_300;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1541:HG4_PB_SVrefine2PBcRDovetail_1081:HG4_PB_SVrefine2Falcon1Dovetail_1210:HG4_Ill_scalpel_1819:HG4_Ill_manta_479:HG4_Ill_SVrefine2DISCOVARDovetail_1462:HG4_Ill_GATKHCSBGrefine_1363:HG4_10X_allpass_344:HG3_PB_SVrefine2PBcRDovetail_1060:HG3_PB_SVrefine2Falcon1Dovetail_1256:HG3_Ill_scalpel_1999:HG3_Ill_GATKHCSBGrefine_1325:HG3_10X_allpass_368:HG2_PB_SVrefine2PBcRplusDovetail_5703:HG2_PB_SVrefine2Falcon2Bionano_784:HG2_PB_SVrefine2Falcon1plusDovetail_6169:HG2_Ill_scalpel_1875:HG2_Ill_manta_549:HG2_Ill_breakscan11_263:HG2_Ill_SVrefine2DISCOVARplusDovetail_6683:HG2_Ill_GATKHCSBGrefine_1318:HG2_10X_allpass_300;NumExactMatchSVs=22;ClusterMaxShiftDist=0.101911;ClusterMaxSizeDiff=0.101911;ClusterMaxEditDist=0.101911;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-99;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:82340446-82340781;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1954.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:56:1/1:2:29:2:19:1/1:0:9:0:20:1/1:0:40:./.:2:18:.:.:.
chr2	83722702	HG2_PB_SVrefine2Falcon1plusDovetail_6175	ATATATATATATTTTATATATATTATATATATATATTTTATATATATATTATATATATATTTTATATATATATTATATATATATTTTATATATATATTATATATATATTTTATATATATATTATATATATATTTTATATATATTATATATATATTTTATATATAT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1572:HG2_PB_SVrefine2PB10Xhap12_1573:HG2_PB_pbsv_2031:HG4_PB_pbsv_2044:HG3_PB_pbsv_2018:HG4_PB_SVrefine2PBcRDovetail_1083:HG4_PB_pbsv_2043:HG4_Ill_SVrefine2DISCOVARDovetail_1471:HG3_PB_SVrefine2Falcon1Dovetail_1265:HG2_PB_SVrefine2Falcon2Bionano_788:HG2_PB_SVrefine2Falcon1plusDovetail_6175:HG2_Ill_SVrefine2DISCOVARplusDovetail_6689:HG2_PB_SVrefine2PBcRplusDovetail_5709;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6689:HG2_PB_SVrefine2Falcon1plusDovetail_6175:HG2_PB_SVrefine2Falcon2Bionano_788:HG3_PB_SVrefine2Falcon1Dovetail_1265;NumExactMatchSVs=4;ClusterMaxShiftDist=0.334247;ClusterMaxSizeDiff=0.334247;ClusterMaxEditDist=0.334247;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-164;DistBack=-23;DistForward=-82;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=203;REFWIDENED=2:83722703-83723069;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1955.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:36:0|1:31:1:4:35:./.:0:2:0:2:0/1:9:23:./.:.:.:.:.:.
chr2	84758440	HG3_Ill_scalpel_2011	TTTATTTTCCTTTTTTTTTTTATTTTTTATTTTTTTTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2539:HG4_PB_assemblyticsfalcon_13539:HG2_PB_assemblyticsfalcon_13706:HG2_PB_assemblyticsPBcR_13307:HG4_Ill_Krunchall_2835:HG3_Ill_Krunchall_2734:HG2_Ill_Krunchall_2707:HG3_PB_assemblyticsfalcon_13770:HG4_Ill_Spiral_156:HG3_PB_HySA_3078:HG3_Ill_Spiral_2125:HG2_PB_HySA_3803:HG2_Ill_Spiral_123:HG4_PB_pbsv_2052:HG4_PB_SVrefine2PBcRDovetail_1089:HG4_PB_SVrefine2Falcon1Dovetail_1220:HG4_Ill_svaba_2527:HG4_Ill_scalpel_1836:HG4_Ill_manta_484:HG4_Ill_SVrefine2DISCOVARDovetail_1474:HG4_Ill_GATKHCSBGrefine_1380:HG4_10X_allpass_348:HG3_PB_pbsv_2025:HG3_PB_SVrefine2Falcon1Dovetail_1271:HG3_Ill_svaba_2567:HG3_Ill_scalpel_2011:HG3_Ill_manta_426:HG3_Ill_MetaSV_2679:HG3_Ill_GATKHCSBGrefine_1336:HG3_10X_allpass_371:HG2_PB_pbsv_2036:HG2_PB_SVrefine2PBcRplusDovetail_5713:HG2_PB_SVrefine2PB10Xhap12_1578:HG2_PB_SVrefine2Falcon2Bionano_792:HG2_PB_SVrefine2Falcon1plusDovetail_6179:HG2_Ill_svaba_2478:HG2_Ill_scalpel_1885:HG2_Ill_manta_553:HG2_Ill_SVrefine2DISCOVARplusDovetail_6694:HG2_Ill_GATKHCSBGrefine_1332:HG2_10X_allpass_301:HG2_10X_SVrefine210Xhap12_1549:HG4_Ill_MetaSV_2633:HG2_Ill_tnscope_210;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1549:HG2_10X_allpass_301:HG2_Ill_GATKHCSBGrefine_1332:HG2_Ill_SVrefine2DISCOVARplusDovetail_6694:HG2_Ill_manta_553:HG2_Ill_scalpel_1885:HG2_Ill_svaba_2478:HG2_PB_SVrefine2Falcon1plusDovetail_6179:HG2_PB_SVrefine2Falcon2Bionano_792:HG2_PB_SVrefine2PB10Xhap12_1578:HG2_PB_SVrefine2PBcRplusDovetail_5713:HG2_PB_pbsv_2036:HG3_10X_allpass_371:HG3_Ill_GATKHCSBGrefine_1336:HG3_Ill_MetaSV_2679:HG3_Ill_manta_426:HG3_Ill_scalpel_2011:HG3_Ill_svaba_2567:HG3_PB_SVrefine2Falcon1Dovetail_1271:HG3_PB_pbsv_2025:HG4_10X_allpass_348:HG4_Ill_GATKHCSBGrefine_1380:HG4_Ill_SVrefine2DISCOVARDovetail_1474:HG4_Ill_manta_484:HG4_Ill_scalpel_1836:HG4_Ill_svaba_2527:HG4_PB_SVrefine2Falcon1Dovetail_1220:HG4_PB_SVrefine2PBcRDovetail_1089:HG4_PB_pbsv_2052;NumExactMatchSVs=29;ClusterMaxShiftDist=0.09375;ClusterMaxSizeDiff=0.09375;ClusterMaxEditDist=0.09375;PBcalls=16;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-293;DistBack=12556;DistForward=-281;DistMin=-281;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:84758441-84758746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1956.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:81:1/1:0:15:0:30:1/1:0:18:0:30:1/1:0:38:./.:.:.:.:.:.
chr2	85519105	HG2_PB_SVrefine2Falcon1plusDovetail_6182	TGGTCATATGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1551:HG4_PB_assemblyticsfalcon_13545:HG2_PB_assemblyticsfalcon_13711:HG2_PB_assemblyticsPBcR_13315:HG4_Ill_Krunchall_2840:HG3_Ill_Krunchall_2741:HG2_Ill_Krunchall_2711:HG4_Ill_Spiral_157:HG2_Ill_Spiral_124:HG3_PB_pbsv_2031:HG2_PB_pbsv_2039:HG4_Ill_MetaSV_2634:HG3_Ill_MetaSV_2683:HG2_PB_HySA_3811:HG2_Ill_tnscope_211:HG2_Ill_MetaSV_2540:HG4_PB_pbsv_2055:HG4_PB_SVrefine2PBcRDovetail_1091:HG4_PB_SVrefine2Falcon1Dovetail_1224:HG4_Ill_scalpel_1840:HG4_Ill_manta_485:HG4_Ill_SVrefine2DISCOVARDovetail_1480:HG4_Ill_GATKHCSBGrefine_1384:HG4_10X_allpass_349:HG3_Ill_scalpel_2019:HG3_Ill_manta_430:HG3_Ill_GATKHCSBGrefine_1341:HG3_10X_allpass_375:HG2_PB_SVrefine2PBcRplusDovetail_5715:HG2_PB_SVrefine2PB10Xhap12_1581:HG2_PB_SVrefine2Falcon2Bionano_795:HG2_PB_SVrefine2Falcon1plusDovetail_6182:HG2_Ill_scalpel_1892:HG2_Ill_manta_556:HG2_Ill_breakscan11_264:HG2_Ill_SpiralSDKrefine_8620:HG2_Ill_SVrefine2DISCOVARplusDovetail_6699:HG2_Ill_GATKHCSBGrefine_1336:HG2_10X_allpass_302;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1551:HG4_PB_pbsv_2055:HG4_PB_SVrefine2PBcRDovetail_1091:HG4_PB_SVrefine2Falcon1Dovetail_1224:HG4_Ill_scalpel_1840:HG4_Ill_manta_485:HG4_Ill_SVrefine2DISCOVARDovetail_1480:HG4_Ill_GATKHCSBGrefine_1384:HG4_10X_allpass_349:HG3_Ill_scalpel_2019:HG3_Ill_manta_430:HG3_Ill_GATKHCSBGrefine_1341:HG3_10X_allpass_375:HG2_PB_SVrefine2PBcRplusDovetail_5715:HG2_PB_SVrefine2PB10Xhap12_1581:HG2_PB_SVrefine2Falcon2Bionano_795:HG2_PB_SVrefine2Falcon1plusDovetail_6182:HG2_Ill_scalpel_1892:HG2_Ill_manta_556:HG2_Ill_breakscan11_264:HG2_Ill_SpiralSDKrefine_8620:HG2_Ill_SVrefine2DISCOVARplusDovetail_6699:HG2_Ill_GATKHCSBGrefine_1336:HG2_10X_allpass_302;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0937973;ClusterMaxSizeDiff=0.0937973;ClusterMaxEditDist=0.0937973;PBcalls=13;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=7;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=-34;DistForward=-24;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:85519106-85519458;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1957.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:49:1/1:3:23:0:13:1/1:0:17:0:27:1/1:0:50:./.:3:21:.:.:.
chr2	85939147	HG2_PB_SVrefine2PBcRplusDovetail_5716	GGCCCCAGGCCCTGAGCCTTGTGATCTTCTGGATATAGAGCTCATGCAGCCAGCTAACCAGAGACCCTGTGCCTCAGCCCCAGGCCCTGAGCCTTGTGATCTTCTGGATATAGAGCTCATGCAGCCAGCTAACCAGAGACCCTGTGCCTCA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_2033:HG2_PB_pbsv_2042:HG4_PB_SVrefine2PBcRDovetail_1094:HG4_PB_SVrefine2Falcon1Dovetail_1225:HG4_Ill_SVrefine2DISCOVARDovetail_1481:HG2_PB_SVrefine2PBcRplusDovetail_5716:HG2_PB_SVrefine2Falcon2Bionano_796:HG2_PB_SVrefine2Falcon1plusDovetail_6184:HG2_Ill_SVrefine2DISCOVARplusDovetail_6701:HG2_10X_SVrefine210Xhap12_1552:HG4_PB_pbsv_2058;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1552:HG2_Ill_SVrefine2DISCOVARplusDovetail_6701:HG2_PB_SVrefine2Falcon1plusDovetail_6184:HG2_PB_SVrefine2Falcon2Bionano_796:HG2_PB_SVrefine2PBcRplusDovetail_5716:HG4_Ill_SVrefine2DISCOVARDovetail_1481:HG4_PB_SVrefine2Falcon1Dovetail_1225:HG4_PB_SVrefine2PBcRDovetail_1094;NumExactMatchSVs=8;ClusterMaxShiftDist=0.013245;ClusterMaxSizeDiff=0.013245;ClusterMaxEditDist=0.013245;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-150;DistBack=45597;DistForward=-151;DistMin=-151;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=157;REFWIDENED=2:85939148-85939454;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1958.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:21:1:27:./.:0:5:0:3:1/1:0:29:./.:.:.:.:.:.
chr2	86453517	HG3_10X_allpass_377	CCTTAGTCCTCTGAAGTTCCTGTGTCCTTACCTGGAGCACAAGGAAGTATGACCCTGTTGTGG	C	20	PASS	ClusterIDs=HG2_10X_allpass_303:HG3_PB_HySA_3089:HG3_Ill_Spiral_2132:HG2_PB_HySA_3817:HG3_PB_pbsv_2036:HG3_Ill_svaba_2575:HG3_Ill_scalpel_2021:HG3_Ill_GATKHC_3377:HG3_Ill_GATKHCSBGrefine_1343:HG3_10X_allpass_377:HG2_PB_pbsv_2044:HG2_Ill_svaba_2485:HG2_Ill_GATKHCSBGrefine_1337;NumClusterSVs=13;ExactMatchIDs=HG2_10X_allpass_303:HG3_PB_pbsv_2036:HG3_Ill_svaba_2575:HG3_Ill_scalpel_2021:HG3_Ill_GATKHC_3377:HG3_Ill_GATKHCSBGrefine_1343:HG3_10X_allpass_377:HG2_PB_pbsv_2044:HG2_Ill_svaba_2485:HG2_Ill_GATKHCSBGrefine_1337;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0625;ClusterMaxSizeDiff=0.0625;ClusterMaxEditDist=0.09375;PBcalls=4;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=30700;DistForward=-59;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=2:86453518-86453582;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1959.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:37:./.:7:3:11:24:0|1:22:0:0:6:0/1:13:3:./.:.:.:.:.:.
chr2	88320968	HG2_Ill_SpiralSDKrefine_8631	TAAGGAGATCGAGACCATCCCGGCTATAGCGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_2043:HG4_Ill_SVrefine2DISCOVARDovetail_1484:HG4_PB_assemblyticsfalcon_13560:HG2_PB_assemblyticsPBcR_13325:HG2_Ill_MetaSV_2545:HG4_PB_SVrefine2PBcRDovetail_1098:HG4_PB_HySA_3050:HG4_Ill_MetaSV_2638:HG4_Ill_GATKHCSBGrefine_1396:HG3_PB_SVrefine2PBcRDovetail_1072:HG3_Ill_SVrefine2DISCOVARDovetail_1418:HG3_Ill_GATKHCSBGrefine_1350:HG2_PB_pbsv_2052:HG2_PB_SVrefine2PBcRplusDovetail_5724:HG2_PB_HySA_3843:HG2_Ill_manta_559:HG2_Ill_breakscan11_265:HG2_Ill_SpiralSDKrefine_8631:HG2_Ill_SVrefine2DISCOVARplusDovetail_6711:HG2_Ill_GATKHCSBGrefine_1346:HG2_10X_SVrefine210Xhap12_1557:HG4_PB_pbsv_2070;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1557:HG2_Ill_GATKHCSBGrefine_1346:HG2_Ill_SVrefine2DISCOVARplusDovetail_6711:HG2_Ill_SpiralSDKrefine_8631:HG2_Ill_breakscan11_265:HG2_Ill_manta_559:HG2_PB_HySA_3843:HG2_PB_SVrefine2PBcRplusDovetail_5724:HG2_PB_pbsv_2052:HG3_Ill_GATKHCSBGrefine_1350:HG3_Ill_SVrefine2DISCOVARDovetail_1418:HG3_PB_SVrefine2PBcRDovetail_1072:HG4_Ill_GATKHCSBGrefine_1396:HG4_Ill_MetaSV_2638:HG4_PB_HySA_3050:HG4_PB_SVrefine2PBcRDovetail_1098;NumExactMatchSVs=16;ClusterMaxShiftDist=0.140741;ClusterMaxSizeDiff=0.140741;ClusterMaxEditDist=0.141264;PBcalls=10;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-247;DistBack=-131;DistForward=-248;DistMin=-248;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:88320969-88321217;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1960.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:./.:0:1:0:2:1/1:0:6:0:9:1/1:0:20:./.:.:.:.:.:.
chr2	88821958	HG2_PB_assemblyticsfalcon_13724	TCATAACGTGGTACAAAAGTGGGAGGGCAAGCGAGTACACGCAAAAGTGGCGAAACATGAGGGGCGGCCTCACTTTACAACAACTGGCTCTTGGGTTAACTAATCCAGTCCTGAGAGAGTGATAACTCACTCACTATGGTGAGAATTAGCGCAGTCCCAAGAGAGTGGCATTAATCCCTCTTAACCACCTCATCAAATCTTAAAGGCCTCACCTCCCAACACTGCCATGCTGGGGACCAAATTTCTAACACATTAATTCTGTGGACACACTCAAAGAAAGGCAGGAAATAATTATCTGAGGGGAAGTTGGCATTCCATTAAAGAAGAGGAATGCCAGAGATTCCCAGCCAACTCAATCTCTTGACCTTGCCCATCATTCACTCCTTTCTAGGCACATGGCTGGTGATTCTTGTTCTCAGTGGTTCCTGCCTTTAGGCTTTGCACTAGCTGATTGCTGTGTCTAGAACCCCTTATTCTCAGATCTTTGCATGGCTGGTTCTTTCCCATGCTTCAGATCTCTACTATAACATCA	CTGAGGT	20	PASS	ClusterIDs=HG4_10X_allpass_354:HG4_PB_pbsv_2075:HG2_PB_HySA_3851:HG2_PB_pbsv_2056:HG2_Ill_tnscope_212:HG2_PB_PB10Xdip_17857:HG4_PB_SVrefine2PBcRDovetail_1101:HG4_PB_SVrefine2Falcon1Dovetail_1233:HG4_Ill_manta_488:HG4_Ill_SVrefine2DISCOVARDovetail_1488:HG4_Ill_Cortex_1833:HG3_Ill_Cortex_1883:HG2_PB_assemblyticsfalcon_13724:HG2_PB_SVrefine2PBcRplusDovetail_5726:HG2_PB_SVrefine2PB10Xhap12_1595:HG2_PB_SVrefine2Falcon1plusDovetail_6200:HG2_PB_PB10Xdip_17856:HG2_Ill_manta_561:HG2_Ill_SVrefine2DISCOVARplusDovetail_6713:HG2_Ill_Cortex_4375:HG2_10X_SVrefine210Xhap12_1559:HG2_Ill_SpiralSDKrefine_8640:HG4_Ill_Spiral_158:HG2_Ill_Spiral_125:HG2_10X_allpass_305:HG2_PB_SVrefine2PB10Xhap12_1594:HG2_PB_assemblyticsPBcR_13328:HG4_Ill_MetaSV_2640:HG2_Ill_MetaSV_2547:HG4_PB_assemblyticsfalcon_13566:HG4_Ill_Krunchall_2864:HG2_Ill_Krunchall_2731;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1559:HG2_Ill_Cortex_4375:HG2_Ill_SVrefine2DISCOVARplusDovetail_6713:HG2_Ill_manta_561:HG2_PB_PB10Xdip_17856:HG2_PB_SVrefine2Falcon1plusDovetail_6200:HG2_PB_SVrefine2PB10Xhap12_1595:HG2_PB_SVrefine2PBcRplusDovetail_5726:HG2_PB_assemblyticsfalcon_13724:HG3_Ill_Cortex_1883:HG4_Ill_Cortex_1833:HG4_Ill_SVrefine2DISCOVARDovetail_1488:HG4_Ill_manta_488:HG4_PB_SVrefine2Falcon1Dovetail_1233:HG4_PB_SVrefine2PBcRDovetail_1101;NumExactMatchSVs=15;ClusterMaxShiftDist=0.13945;ClusterMaxSizeDiff=0.13945;ClusterMaxEditDist=0.13945;PBcalls=14;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-525;DistBack=-110;DistForward=-413;DistMin=-413;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5456;REFWIDENED=2:88812159-88827945;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9962;PctRecOverlap=0.985;SizeDiff=2;StartDistance=-8;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1961.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:34:0|1:28:0:1:26:1|0:0:45:70:0:0/1:60:16:0/1:51:7:.:.:.
chr2	89029228	HG2_Ill_MetaSV_2548	TGAAAATATTAAAACTAAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGTTGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCGTAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1562:HG4_PB_assemblyticsfalcon_13568:HG2_PB_assemblyticsPBcR_13330:HG4_10X_allpass_355:HG2_10X_allpass_306:HG3_10X_allpass_379:HG3_PB_assemblyticsfalcon_13795:HG2_PB_assemblyticsfalcon_13726:HG4_Ill_Krunchall_2866:HG2_Ill_Krunchall_2733:HG3_PB_pbsv_2047:HG2_Ill_tnscope_213:HG4_PB_pbsv_2077:HG4_PB_SVrefine2PBcRDovetail_1102:HG4_PB_SVrefine2Falcon1Dovetail_1234:HG4_Ill_SVrefine2DISCOVARDovetail_1490:HG4_Ill_MetaSV_2641:HG4_Ill_GATKHCSBGrefine_1402:HG3_PB_SVrefine2PBcRDovetail_1075:HG3_PB_SVrefine2Falcon1Dovetail_1279:HG3_Ill_SVrefine2DISCOVARDovetail_1421:HG3_Ill_MetaSV_2691:HG3_Ill_GATKHCSBGrefine_1353:HG2_PB_pbsv_2058:HG2_PB_SVrefine2PBcRplusDovetail_5727:HG2_PB_SVrefine2PB10Xhap12_1596:HG2_PB_SVrefine2Falcon1plusDovetail_6201:HG2_Ill_breakscan11_267:HG2_Ill_SVrefine2DISCOVARplusDovetail_6714:HG2_Ill_MetaSV_2548:HG2_Ill_GATKHCSBGrefine_1352;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1562:HG4_PB_pbsv_2077:HG4_PB_SVrefine2PBcRDovetail_1102:HG4_PB_SVrefine2Falcon1Dovetail_1234:HG4_Ill_SVrefine2DISCOVARDovetail_1490:HG4_Ill_MetaSV_2641:HG4_Ill_GATKHCSBGrefine_1402:HG3_PB_SVrefine2PBcRDovetail_1075:HG3_PB_SVrefine2Falcon1Dovetail_1279:HG3_Ill_SVrefine2DISCOVARDovetail_1421:HG3_Ill_MetaSV_2691:HG3_Ill_GATKHCSBGrefine_1353:HG2_PB_pbsv_2058:HG2_PB_SVrefine2PBcRplusDovetail_5727:HG2_PB_SVrefine2PB10Xhap12_1596:HG2_PB_SVrefine2Falcon1plusDovetail_6201:HG2_Ill_breakscan11_267:HG2_Ill_SVrefine2DISCOVARplusDovetail_6714:HG2_Ill_MetaSV_2548:HG2_Ill_GATKHCSBGrefine_1352;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0114905;ClusterMaxSizeDiff=0.0114905;ClusterMaxEditDist=0.0114905;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3054;DistBack=28086;DistForward=43407;DistMin=28086;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=2:89029229-89032300;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1962.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:107:1/1:0:24:0:25:1/1:0:25:0:24:1/1:0:31:1/1:3:195:3143:.:.
chr2	89132283	HG2_10X_SVrefine210Xhap12_1563	TCCCACAGTGTGCGCTGCCAACCTGCTGCCCGTGCAGAAACTCTAGGGTAAGAGCTGGCTCCTGGAGTCCCACCCAGGCTGCGTGTCCCTCACAGTCTGCTCTGTGTCTATGTGTGTGTGTTGGGGGGATATTATTGGACAATTCAAGGGAGGCTCAGTGAGGAGGAAGGAAAATTTCATGTAATTCTTTCTGGTTTGTCTTTCTCAACCCCCTCCTCCTGCCTACTCCTTAACTGAGAGAGTGTACTATTATTTGTGTGACCCTTTTTTTCCTCCAATACACATAGAAGGTTGTATAATTATGCTTTTCTGTTTTGGAAAATGACTTAAAATCATGTAAAGAAAAAGCTTACTTAGGTGAAATGTAGATAAAGAGATTGTGTCAGCAAAATATAATTCTTAAGGGTAACAAGGGCCATGGACGCAATTTTAATTGTGAAAAATAAGCAGGATTTCATCAAAGTAAACTACTGCAGGTGAGAAAAGTTGAACTGCTGTAAATAAGCATTATCCTGGGCTGATAATGCTTACAAATGTTGATCCTGAAAATTCTTCAGGTACCTTTCAGAGCTGAGAGTTGTGCTCTCTGGGGTGACACTCAAAGGAAATTGGGTCCTTTTTTAAGCATAATCTTCTTGGGTTTTTAGTACATTCTTATTTTTTATTGAAATATACAATGAAAATTCATCATAATACACTCTTACTCCTAAAAGAGATTGCTGTATCATAGGACATGTGTGCATATGAAATTTTATATTTATGTTGAAAAGTTTTGAGGAGAAAAGAAGAATCCTTTCTCTAAGTAACTTTATAGATTTTGTTTTTAATTGCACGCATACAACAAGTTCTCATTAATTATAAATTCAGTTCGTGGGCAAAATATATTTTCTGTGTGCCCCTTTCTATAGGAAACTTGCTGGATTATTTCTAATTCTGAGTCTGTATCTGAGTAATAATGACAATAAGTAAATGATCCCAAATATATTTATATAAGTAAGAGATTGCATTCTAGAACTTATTTTTTGAATAATTTTCTATAATTAAAATGACAAACACTTTTGCAATCTGAATTTCATAGTAAGGATAATTCTAAACAAATTTTGAAAGTTTTGGTTTTAGAAGAAGTTCAAGAACTATTTGGCTCTGCACGGAGAGCTTACACAAGTTGTATCTCTAAGCCCTAGCTTCTTGCTATGCCTTTATTAACATACCAGTTTTGGGGTTAAAAACCTACTTTAGAGCTAAAATATTTTATTAAAAATTTAAAAAACCTACTTTAGAGATAAATATTTTATTAAAAATTTATCAGCCTGGGGGATATGGAGTGGTAGAGAGAATTACTTCCCATGGCTGCTCCCTTGCACTGTTTGAATATTTTACCAAATGCATGCATTGCCTTTCCAAAAGAAATGGAAATATTTTCAATAATCAAATCAGTAAAATTTCTGATGCTTTTCAGTTTTTTATACCTACTTTTGCCTTTTTGAATATTCTCAAGAATGGAACTAGACAAATGTAAGTGATAAATTAGAGAGAAGTGACTTTAACTTAAACATGCATCTGTGCCCAGACATACCCTTGTTAATTTATTAATATTTTAGACAATTGTCAGAATCTAAAGTATTTCCAGTTCTCAATCTAGAATGGCTAAGCTTATTTTTATGGTTCTACATGCCACTTGACAATAAAAGATCATTTATGATTCTAAGAAGCATTTGTCTCTCAAGTGGCATTGTAAATCAGTACAATCTTTTGAAAAGGAATTTAGTAACACATTTCAAAGGCCATGAAAATTCCACTCCCTGTAAGTGAATGATTTCAGTAAATTTAAAAGTCAAACATTAGAAGGCATGCCATGTTGCCTTTCACAAAAATAATTCTGCTACCATCCCTGGAAGCTGTTGTTAGAAGGTCATGTTCAATAAGCTTACAATGTTTTCCTGATTGTTGTTTGTGTGACCATTAAAATTTCACCAGTATTGGGGAATTTTTACCTTTCAGATCATTTAGTTCCAACTGTTAGGAAGCAATTAGCTCTTATGTTCTTCTGGTTCGTGAAAGTATTTTACTTTGGGTGCAGGAGTAGGGTCTCTGGGGCCATGGAATGATCCACACAGGCCCTGGCATGGGAGGGACTGGTTCCATCTCAATCTGAAAATCAGACAAAGGTTTATTTCTTACTTCTGTTATGCAATGTTGGCAGGTTGTTCTGACTCTTTTCCAGTTCCTGAATATTACTTGTTGTATAATAAAAATGATATTCTAACTAAAAATTTTAAAGAAAAAAATTTGCAATCTTGCAGTTTAATGCAACCATAGTCTTAGCATTTTTGTCTGTGTTCTCTTTTCAATCTTTGTTTATAAACATATATGTTTCTACATAGAGCTGATTGTAAGAGGTATAGAATTCCACACTTTATAAATGCCTTGTTAATTTATTGTTTTCCATGTTGTCACATAGACTTCAGGGGTCTCCTCTCAACTGACTGCAAATTACTCACTGAGTTGGTGCCCCATTATGTCCTCGGTCATTTCCCCTATCGTTGAGCATTTACAACTTTTCTAATGATTGACTTTTAAATTTCTTGAAATTATTGAGTTAAAGGGAGCAGAATTTTAACAACTTTTGTTATGTGTCACTAAATCCCTTTTCAAAAGATTGTACTGATTTACAATGCCAATTAAATGTTTTACAAGTATTATTTTCCAACTATGTGAGGATTATTTTTGTTTATTTCCATATATCTCTATCTCTCCTCTCCAACCAGCCAAAAAATAAAAATAAAAATAAAAATAAAAGTACTCAAGGGTGAGTTAGGATATAGACATACATATATGCTTATGTGTTTACATTTACTACGAATGTCTAAGCTTCAAATATTGAATTCTACAGATATTCTCTCACTGAGAGACAAGAATAACTGACTTATCCAGGCTGCAAGTCTGGTGCTTGTTCTATTTGATAGTCTGATGCTGTAAGTTTTTTGTCACAAACTCTGAAGAGTAAAGTGGAAACTTTGACTTTTTGCTTCTGATTGCAGATTTCTATCCAAAGAGGGAGTTGAGGGAAATGCTTCCTGTTGTCCTAATTACACAGTACTAAGTGAACACTGGATATGGAGTCAGAAGGGAAAGTAGACTTGTGAGCCCATCACATATGGAGAAAACACTTTTGGTTCCCATTGTTGGCAGGGACAGGGAGGCAGGCCATGTTGCCTTTCACAAAAAAAAAAAAAAAAAAAAAAAATTCTGCTACCATCCCTGGGAGCTATTGTTAGAAGGTCATGTTCAACAAACTCGCAAAGTGTTTTCTTGATTGTTGTTTGTGTCACCATTACTCAACGTTGTGTAGAATGTAGTCAGGTGATATTATCCCCAATTTTATACCGAGACTTATTTTAGGTGGATTATATGACTCAGTCAGAATCGCATCAAAGCAGAACCAGAACCAAGTTTGTTTTCAACTCCAGTGCTTCTTTCCGAAGTTTTATTTCCATTGTCAGCCACTTAACTATTTTAAAACGTATCTTTTGGAATAGGGATCTCTCAATAGGAATCCACAGCAAAGATGAAGAGAAAACTAGATCAGTTGCCTTGGCAATTTTGTCCACTCAGACCAGGACATTCAGGGATTTCTAGATTGAATTTGTGTTTCCTTCTGACTACATTGTTGAAATGATCTGGATCATCTCCTAATCTTGCTCTTGGACTCTCTAGGTGTATTCTCAGTGTCTGTGAGGGAGGGCATGTGTTTTAAGCAGTAAATTCCTAAAGGCCTGTGGAGGCCCAAGGCCATGCACACTGAGGGAGTTGTGGATCAAGTGGCATGATGGGCCCAGTCTATTTCTGGCAGAGCTGTTATTTTAGCTGTTATTCTCTTTGGCCAGTTATCTCCCTTAGAGTAGTGCCTCTTTAAATGCTTTTTCATTTGGTGAAATCTAAAAATTTGTCTCTAAAAGGCATGCTGCCAGGCCTCTTTTCATATTAAAGTGGTCATCTCCACATTGTAGATAGTAAATCATGTTCAAAGAAAAGACCTTAAAAATTCTTCATATTGCCTTGCAGAAATCACAGTATTTTAGATGTGTTGGGGAGCTTCACAATCACTCAGTTTAACCCATTCATGTTACAGACAGGGAAACTGAGGCCTGGTGACTTTCCCAGTTATTAACAAGGTAGTGACTGAGAAGGGACTTCAGTTCGCTGTTTTTAATGACTGTATAGTGAGCATCTGATGTTTGGTCTTCTACAGAAAGGGAACAGAGTTGACTAAAGTGAAAATACCCTAGTTCAGACATCAGAGGCAAAAAAATTAATCATAATCACAACAGCACCTTACAGTTGTGGAGTCCTTTATAGTTTTTAGACTCTTAGACACAGAGAAATAGAGAAATATAAATATGGAAAATAAGGTTTATTTGATATTTTATGAAATGGAACCCTAATTCACCAACATTTTTACCCCTTTATAGTACTGCAATAATTTGTTGTGAGACTCTGAAATCGTTTCTGAATTATCAGAGGAAGAAAATCATTTAAAAAAGGAAACCAGAGCTACTGGCTCTATCTTACTTCGGTCATGGTCTTTTAAAATCTATTCAATTTATTTTAACTAGACTAATTCATTCTTAAAGTAAGTCAGCTAACATGGAATTTTCTGAGGTTACTTAAAAAATTTTGGAAATTTCCTTAGCTCTGCATGAAGTATTTTTATCTCTTCTTCTTCTTTTTTTTCTAAAGAAATAGTGTTTGTGGGTCTTGATAACTGCCCACAACAGATTTTATATCATCTGGTTTTGATAGAGCAAGGGGGTCTAATGAATGATTGAAACTAACATTTATAAAATCTTTCAAATTTGAGAGGCAGGTTCTTGGAAGAAGGAGGATACAACAGAATGGCCTCTGTGTCACTGGTAGGACTCTGAAGACAGGACTTACTGCCTATGTTCCGACATGAAGAAACAGACTAGTGAAGTATGTTGTCAAAACTTTGAGAATTGTAAAGCAATGTTCACATGTAGGTTGATAAAAATAACAGAAGAAGTTATGTTAACCTAGGTCCGACCCTAGGTGCTGTCATGTTGTCACTACCTTCATAATAAGCTTCAAAGAGGTGCTCTGTTATTATCTTTAAAAATTACAGACGAGGAAACTAAGGTTTAGACAGTGTTAGTAACTTGCTCAGGGCCAGTCACTCAATGTGTGGCAGAGCTGGATTCCAAGTCAGTGCTGTCTGGCTCTAAAGCTTAGATTCTTTTCATTGCACTTTTATTATTAAACCAAAGAACTTATGATTAAAATATTTTCTGCTTTCCTTGACGATTTATTTCAAGATCTAACCATTTCTTTTTCCTGGACATTCTGAGCAGGGAGCACTAGCTCTCAACTTCCCTGCCTCTACCCTCTGGCTGGGCTGCACCTTCTCCTGCTGCCTGTTCCTCCTGCTTCATCAGCACACAGTGGGACTATACATTAGCCAGGGTGTTAGACAGGCCCTCCCTGGACCTTGTCTTACTTTCCCCCTTGTGTTATGAGGACAAGCTCTGTAGTAACTACATTGAGAATCTTAGGAGCAAAGGCTCCCCACCCCCATGGGGGCACGTCAGTGACATTTGGCTCCTCCATTTTGCTTAAGAAACCTGTGACCAGACCCTCACCCCAGGCCCATAGTGAGAAAAGCCTGTTTTCATTTCTTCTTTCACCAAGCCCATCTGGATAGAGCAGGTGCAGGGCTAGGCTCTTAAAATAGAAGCCCTTGTTTCATGTGACGTGGCACGGTGGAAACTCCCTTGCTTCCTTGCCTGTTGATCAGATTAATGAAATGATGAAGGTCTCTCCCCTCATCGTGGTGTTTTCTTGACTTCCTGTCATTGTCAGTTGACCTTTCTAGTTTCTTCATTTGTAAAATACAGGACTTGTTCTTCATAACCTCAAGGGTCCCTCCTATCTTTGATAATCTGTCTCCATGCTTCCGATTAGGGGTCAGATTTTGGAATTTACCATTTCTATCTTGTTTATTTCTCCCAGCAATATTATTCCAGCAGGAATAGCTGGGACTAAAACTTATTCTTGGTTAAAGCACATCATCTCACCATCTTGACATCCCATTTGCTCTATACCATCAACCATCTCTGACCCTGAACCCCAGTCTCCTTCTTTGTAATTTAGGAATAATAATACCTTATTCATGGTGTGAATCATATGAGAGAGAGGATTTAACATTGCTTAGCAAGTGATACACATTAGGCATTCAGACAATGCTTGTTCACTTGGGGTCAAATAATAAGGTCCATTTTCTCTTCATGACTTCTAGCTATTGATTAGCTTTGAGGCTGAAAAATAAGTTTAAGATGGGCCCTCTGACCTCAAGAGGCTAGCAATATTTTATCTTCTTTTTAACGCTATCTCCTATAGGAAGGAAAGCTAGCAATATTTTGGATAAGACAAAATAAATACATATGAAACAGAGAATGGATTAAGTCTGGAAAATCCTTCCAGTGCTACACCTAGGACAAGGTACCCCATGCAGAGCAGGTAAATTCTTAAAAGGATGGTCTCTGAGTCAAATTTTGGAGAGTGAAGTGCCAGCATAGCTGATCATCCTAAGAAAAAGTCAAGACCGCAAGTTATGGGTTCCAACAGTGGAGAAAAGGCTAAGGAAATTATGCACTGTTAGTAAGATAGAATGATGTGCACCATTCAAAATGGTCAATATGATGCATAAGTAGAAAAAAAGAAGTGCTGTGAAACAACAGCAAGTGAAAGAATTTGAACACAAAATTCTAGTAATAGTGTCAATGGCTATGTATGAAGATACTCAGATAAATGTTAGAAAAGAATATAATGTGGGAAATGAAAATAATAGATGTGTTAGGGTTATGGGTTTTTGGATGAATTTCAAAAACATTCCTTTTATTAGGCTTTCACTTCTTAAGTCAAACATTTTGAAAAATTTCACATTGTATGACTTGGATTGCATAATATACCAGTTCCTGGGCTAAGGTTCCATCTTTCTCTGGGGCAGGATTTCCTCTCTGGTTTTCATCGTGATCTCTGCCTTTGAATGGCTTGCTTTTTCTTTTAAGAGAAAAAAGTATGACAAATCCAGTAGGTGATGGAATCCTCTCTCTTCCATTTATATTTCTGTGGATCTTCCTTCTCAAATTGCCTATAACTTCATATTGAATCTGAAGAAAGGGAGAGTTTCTAGGAGCCCTGATATAAGGGCTCAGGGATTTGTGCTGCCATTTCTTTAGAAAATGCCTGATTTTCCCAAGAATGGGTCAGCTCTAATGGAGGTACCTATTCCTTCAAGGAAAAGCAGTCAACTTAGCAAACAGGTAATTCCAGAGGTGATTTACGTTTTACTTTGGCAGATGGAGCCTTCATTTTCAATAGAACTCCCTGTGAACTTCCTTTAAAAGTGTTTTGACTTTTCTGGAACACATGGACTCCATGCAGTGACGTGCCCGGTAGGCAGTAATGCATACTTAGGGCTGGCCTTCCACAGCTTGAGTAGGTGGGTTCCCTTTAAATGAAACAATCTGAAGAGATGCAACACAACTGTGACCCTTGGTGGTCTTCCAGCTTTTAATCTGATTCAGGCCACTCATTTCAACCCTATGCAAGCCAATTTGACGCAAATGAGTCCAATCTAACCAGTCCAAAAAATACTTGGGTGTTTGTGCCAATAAATCTAACGATCAAATCATTCCCCCTTGAATTAGAAGTTAACAAGACAGGATAGCTCATACTGCCCTCTAGTCATTCCTGCCACCATTAAGAAGCCTGGGGCTCTTTCTTACCCCATGTGCCAACTTCTCAGGGCCTCCTTGTCTAATTTTGCTTGAGAATGTAGAGTAGAGGAAGGAGAAATGGACAGACAGCCTAGAGAAGTGACTTACAGTCTGGGTTCAGCTCTAACTACTAATAGTGTTGAGGACGTCAGTCAGCTTCTCGAAGTCTCAGTCTCCATATTTGTTAAAATAAAGAGGGTAGTCTGGTTTTTCTGGCCCCTTCTCTCCTGTCCTCCTAGACTATGAATTCATTTTTAGCTTTTTAATGCAAATTTTTGATTCATTAGAATCTAGCTTCTTCACTCTGCCACTTTTAGTTGGCTCTTCTTAGAGCATTAGTGCCCAATTTGCACTGTTAGAATTTTCCCTTGTTTGTACCCTTCAAAATTTTTCTTTTTTTGGGCAAGGATTGTATTTTTTTCTTTTTAACTGGCTCCTTGAGGATAGATGTTGTGATATCTGTGTGCTTGTATGTCCTCAACTGTGCCCTGCACTGTTAGGGCCCTTGTCAAAACAACACATTTCTCAGTGATTCTGAGACTCTTTCTCTTATCTATAGAAGTCATAACTCAAGAGTAAAATCATACCAATATTTTACATAAACCCTAGAATTTTTATAGATCTATTATTTCTTTTTAGAGTACATATTGGAAGTAACTTCACAAGGAACATTTTCTTTACTTTTTTTTTTGGAAAAAAGATTTATGCTTATAACCAAATGAGGTTGTTTGGCAAATTTGTCTGGAGAGACACACACACTCAGGGCAAATAGGCACTCCTTTCCTGGGCAACTCAATTACCTCTTGCCTCTGGTCAAACCACTCCACAAATAAAGTGGACTGATCCTCTTGACTCTATGTGTAAGTGCCCATTGTGTGTGCACAGAGCTGGTGAGAACGGCCATGGTGCTAGGTGGGGGTGGTGTTGGTGGAGTTGGACTAGATTATCTGGGATCATGCGAAATGGAAATTCATTTCTAGCTGGCTGGCTTCAGAAGGTGCCATCTCCTATTTTTATATGAAGCGTGCTTTGGAACTCAGGGCAACGAAGGGTGGGTGTGCTGCACAAGGACAGCAGAAGAGTGAGCTGACTGGTCCCTGAAATCGCAGTTGGAAAGTGGATTACCAGTGCAGTAGAACTCTTCACGGAGGCCTGGACCATCAGGTCTAATGGTGTTGTTCCAGGTGGGTGGTCATGTGGAGCAAAAATATTTGAAATCAGCGAGCACGTACCTGAGAGATGACTTTTCCACTTGGGCTAGTCTCTTGATATTTCTGGTCCTGTTTCTTCATCTGTAAACTGGGTTAGTAATGTCACACTCTGTGAGTTGGTGCATCCAGATAACAAACAAACAAACCCACACACAGAAAAACAATCCCCATAAATGCCCTATAAACTTATATTAATCATCAACAATTCATTTATTTGTTCACTCACTTATTTATTCAACAAATACTCGTATGACCAAAGCACTGTGCTTTGTGCTAAGCTCTACAATAAATATAGAATTGTATAAAGATCAAGGAGTAAAAATCCTAGTTCAGGTCCTCAATAAATGATAGGTGAATCATAGACTGAAACGTGGAAGTAAAGTAAGGAGGTCTTCCACGACTATTGTGATCTTCAAATGTTCTTTTGGGTGCAGAGTTTCCCCGGGAAACTGCCAGTTTCTATAATGGACAAAAGACTTTGCTTTTCAGGAGTATATATTTTGATAGGAAATAAAGATAGAAATACTTGGAACTTAGACAAATTAAATACATAAATGATGGATAGTATGTAGGGAATACAGTACTGTGGGGAATCAAAGAGAGGGTGAATTCTGGGTGAAATCAGGAGGGTTTCTCATTATTCACAGATGATCTCTTACAGGAGGTGGGAATTTTTAGGTCAGCTGGAAATGGAACCAGGCTTTCATGTTCAGATATACTTGCAGATAAACAACTCATAAGAATTATAAGACTAACAGCTTCGTTAGTTTACATTTGACAATTTATTTGTGCCTCATTATTTTGGGATGTGTCAAGAATCTGATAACATGGGTGATAATGCTATTTGCCACTGTAATATCAGGTAGTCCTAGTGAAAATGCAACTTTTAAGAACTTGTTTAATTGTATCTACCAACTCTTACTGCAGAATGTAGACTTGAAAGAAGCACATTCCTTTTTCTTACATAATCATTAGGGGTTACTACATTTCTGAGCAACAAGGCTCAAGAGTTTCCAATGGAAATGTAATTTCAATTAGAAAACCAAATTGAGGTTGAGGGTGGAGAGAGCCAGCTGCAGAAGGTATCTGGACAGCAGCATGTATCTGCAGGCCTGCGTGTGTGCCAGGGTGGGGGCAAGGAGGGGTAGATTGTGTCATTTTCCACATATGTTTATTTAGCTTCTCCTGTTTCAGGGACTTTGGGTTTTATTAATAGTCAATTTAGGATATTGTGCCTCCATCCTCAAGCATTGTCAATCTTAAAAGGATGGGTGGGAGTGGTAGGCATTAAGCCTCAGAATCTTCTAGCCCTTTGGCTGGAGTGGTTCTGTCTGCTATTGCTGCAACCTGAGGAAATCTTTCAAATTCTGGGTGGGCTGCTCTGGTTAATATAGTGGAGACTCTAACAAAAATTATGTCATCCAGCAATAGAGCTCTGGTGCAGTGAGTGGCAGACTAACTGATGAACATCTCAATGCACAGCAATTCTCAGCAGCCCTCAGCCAGGGCACTCCTAGGGAGGGCCTCTGGTTACAATGCTCTTCAGAGCCTGCCCAGTCTGTCTCTGTTTCTCTGTCTTTTCTTTCCTTTCTCATTATTCCCATCACTATTATTGTTTCTCTTTCTCTAAGGTCTGTATATTATCCTTTCCCCTAGTTCTTTGAAAAATTTACTTCAGTTGCACACACAATAGAATTAAATGATAAACATCAATTTTCTAAATAAAATGCTGTGTACACCCACACTCACACCCACAGAGTATTTTCTATTTCTTAACAACAACAAGAAAAACAACAAAATGCATAGTAAGAATTAAAAAATCTGGAGGAATATTGAAGGCCAGGGCAGATTATTTGTTTAGATTAGTGATCCTTAACCCAGAATTTCCTCACATCTAGATTATTGTCTGGTGGATGACAAAGGAAAATATATATTGGAAACCCAGTTGTGGATCCTTGAGAATACAGTAGAAAGAACAGTGAAAATTGAAAGGGAAAAGGTGAGAAAACCTTCTTATTCATGTCCAGGAACAGAATTGGGCTTGAATTTGGTGGCTGCAGCTCTGAACGGACTCAAAGTGAGTGTCTGTAAATCCTGCTCAGCAACACGAGGACAGGGGTTGCCATGTCCTCCTCTTCCTTATGTACCTTCCCTCATCTGCCTCCCTATCTCTAGCACATGGACCAGGGGCTCATAAATGTCTGTAGGATGGAAAAATCTAGGAATACATGTGGGGTCAGAAGTTGTAAGAGATTGGGTTGAATATATTCTGATTCCCCAAGTTGTTTTTGTCTACTTATTTTCTTTTTCTTCTCTGTGATGGTTCTTTTTTTCTTGTTATTTGTATCTTTGCACAATGAAAGACAAAAAAAAAATAGTTCTAGTCACTAGAGGACTTCAGTAAACATGCTATCACTTACCTGCTTATGAACCAAGAGGTTGGGAAGGCAGGTCTCAGTTGGCATGTAGCCCGAGAAGAGTTTGTCACATCTTAGAGTCTAGAACCTCCTTTCCCACAGAGATACAAAACACACAGTTAACTCACTGGTATTTTGGCTGGGAAGATAGCTGAATGATAGCACCACTTTAAATCATATAGTGATGACTGCTGCTGATGATGCACATTTCTTTTCAGTATGAAATATTAGTTTTTTGGGAAATCCAATGTTCACCCTAATCTTGCAGCATTTTGTAATTTCCATCATGGCACTGAGCAGGAGGCAGGATGGGCTGAAGGGAAATACACTGAACTGAACTGGATCCTTAGGCCTGTGGGTGAGACACAGTATTGGCAGATAGTGCCTTCACCTTGTGGCTCAGTTTCTTCAGGTTTCAAAATTGAGAGACTTTTTTCACTTTTACATGTTAAGTAGGTAAGGATGAACGGAAGGATTGTGATGTATTGCATATTGGAAGAAACAAAGGTATCAGGTCAAAATTAAGAAGGGTTTATTTGTGGAATTACTGCAGGGAGAATATCCACTGAGCTCAGCCATTGAACTCAAGAACCTGTTAGTAATTAAGAATATGAAAAGATTGTGAATTGAGCACCTTCTCTGCACCATGCCCCGTACAAAGTGGATTATACACAATATTTCATTTGCTGTTCACAGTGATGTTGACATAGAGGTTTATTGTTATTGCTTTATTATAAACAAGTAACCCCAAACAAAGAGGGGATAAAAAAGTGATAGATTCCCATGTGAGAGCTCACTAACCCATGGTATCCCAATCAGAGGGCTAGAGCATTGGAATGACGTGTGAAGACACTGTTGATGTTAGGTAATTCCCAGGTTGGTTAATGTTTGGGCAGGAGGGGTATAACTTCTCTGGCCTCCAATATGTGTTAGGCACCCCTTCTGTGTGCTTACGTAGAGCTCTGTAGGCACTCCTCTCAGCTCCATTTCTCCATGTTGCAATTTCTGGTTATTTGTTTATACACTACTCTAGGAGCTCCTTGAGGTAGAGAGTTCTGTCTTGTTGACTATGTTATCTGCAAATCTTCATAGAGAGCCAGGTACATGGAAATGCTAATACATTTCTATGGAATTAGTGAAGGTGGACATTCATACGTCCAGGCATATGAACAGGTTTTTCTCTGGAGTTGGTGTTGTTTGGTGTAGAAGGGCTGTCAATGAGCCTTATGACTTGAGGAAGGATCAACAGATGGGTGGATAGAAGTACAGATGGTTATATGCATGGATGGAAAGGGAATATGGTAGAAGAGAATGCTTCTGTCATGGGCTCTAGGAAGTTTACTGAAATATATTCTGAAAGGTTGATATGTATAGTTCATCCTTATTCTTCCCAGCCTCTCTTTTCTGAGATGACCAAACTATTCAACATAAATGGTTTCCTGCTGCTCTTAAATATTTCCAGGACACTTCTGGGTCTCCTGAAGCACCTGCTTGCTCACAGCTTCATTCTCACGTGAAGTCTGCATAGGTCCTGTTACCATATCAGAACTCTTAGAGGACACTTATTCTGGGCTGAGGTTTTCCAAGGTGAGAACTCCAGGACTGGAGATGGAGCAGTGCATTTAGGTGAAGTGATATCAAACAAGGTTGGGGTTGGTGTTACTTCCCATCCCAGTGCTGGACACAGCCTTGGCCAGGTCCTGTTGTGACCCCAGGTGCACGGGGCCTTGGGAACTTCTGAAAGGGTGTGGAGTGCTCCACCCAGCCCTGTTGGAGGAGGATGGGAGCGAAAGCAACAGATGTGCTCAAGGTTCTGTTTTCAGTTCCCCAAAGGGTCTTCTCCTTGACCAAAGCAGTGTGACGGTTGCTATGACAGTTGCTATCTTGGTCCCTGGGACTCTCCCTCATAAGGTAGCATTACTTTTTTTAATCTTCTCAGGCAAGTAACCATGAAACTCTGTAATAACCAGTCTGAGGTGGGGCTGGTTGGGGGCATGTTTGGGCCTGAGTACTGGGATGTGATGGTGGAATATGCTGGGGTACCAAGAGGTACCTTTGATTAATGAGTTATTTTTCCAAATTAGACCAACACTCCTCCTAGTTGTCTTAGGCTTGATGACTCTCCATTTCTGCAGAAGTTCAGAATTCTTCCCTTGAGATGTCTGCAATTAGTTCATTGTTGCAAATTATAAAAACATAACAGGTAGAAAGAACACTGACCTTGAATCTCAAATCTGTCTCTACCAGGTCATGTCATTCAGTCTCTGCTTGGGTCTTCTCATGTGTTAAATGAGAGCTTTGATTTCCAAGCTCCTTTTCACTCTGAGAGTCACTGATGTTTTGCCTCTGAAAATGGCAACCATGAAGAGTAGTTACTGAGAAACCAGCACTGTGTTTTAGAGTTAGGGCTCTTGATCAGGCTGCCTCATTTTGAATCCTGATTTGGGAATTTCTGATGATGTGATCTTGGACATGGTATTGACTTTCTCTAAGTCTTAGTTTTTTTTTTTTTTTTTATCTGCAAAAGAGGGTAAAACAAGCTACCCCAGAGGCTGCTGGAAGATTCAGTGACATGTTGCTTGTCAGTGTTGAGACATTGTATCCATTACAACTATCATAGAATAAAAACCTGTTACAAGTTGGCATGGGCCGAGCTGCCAGCAATTTCATACATCTCTTTTATGCCTATTTTGTTTTTCATTTTGATCATCAATATTTTAATGGTGTGTCATAAATTGGGGGCTCTTTCTTATTTGTTCTTGGACCCATGGTGAAATAAAAGCTTGTATATTTTTTTAGAAGGATTCATAGAGATGAAAGGCCCTTACTGAACATTCAGTCTGACCTTATTAGTTTTAAAGGAGCTGACTGAGACCTAACTGTTATTATTACAAACTGATATTATTGGAAACCAACACAGAACCTACCATGTGCAAAACTGTGGGAAAGGCTTGGAAGTCTGGGTTTGACAACCTGAGTTTAAATAGTGATTCTTTGTCTTACTAGCTCCGTAATCCCAAACACGTAATGCAATCTTTCTTAGTCTGTTTCTTCATCTATGAGACAGGGCTAATGAGAAACATCTCAGTGTATGGTATGACAGCAAAGGGGGTCATACAGGTGACAGTGCTAGCAAATGTCAGTCCCCTCCTCTTCTCTACCTCCCAACTCCCTTGACCCTCTCCTCTGTCATCCCTTTTCTGGCTGCGTGCAGAGAATCTTGCTAGCTTTAGGGATACAAAAGGTTCCAGAGTTGGGAGACAGACTGTTCTCATACAGAGATCAATAACCACATGATATGGGTAGTAAGGGCCATTCAGATCCTGAGAAGAGTTTGGCAGGTCAATGGAGGGTGGAAAGGATGAGAGGAACTGGGGAGAGAGACAGAGAAGAGGGAAGGAAAAGGAAGGGAGAAAAGAGGACATTGTGTATCTGAGAACAGGAAAGGAGCAAGTGGAATGGAAGAAGGAGAGGGAAGGCAGCAGGTGAGGGCATGTCTGTTGGGGTGTTTATGGAGGGTTTTTTCAGGGAAAGGGTCTGCAAATGGAGCCAACAAGAAAGGAACTGGCAGGTGGTCAGGATGTCCTCCTGTGAGAGTCACTCTTCTCCCCATCCTCTCTCCTCTTAGCTTCACCCTCGCTAGAACTTTTCCTTGCTCATTTCAATTTTCAAGATTTTCCCAAGCTTCTAAACCTACAAAATCTAAGCGACACACATTTACTGGAGAAATCACAAACAGATCCCAGCCCTCCTGTGGACCTCTCTGCATCTGTGCCCTGGATACCTCTTTCTCCTTTGTTTCTGTGGATGAAACATCTGTGTTCCTAGCTGAGGATGATACCTCTACCTGTCTTCACCCACCCTTCTCACCTACTCAGGAACATTGCTCCAGCAATTTCTCTTCTCTCCTCTTCAGCACCAGCTTTTCCCTTTCTACCAAATCATTCTTATCAGCACTTAAAAATGCTGTCGTTTCTCTCCATTTAAAATAAACCCTCACCTGTGTATCATGTAGAACTATCAATAAGAAAAATATTAAAAAATAAGAAAATAAAGAAAAAAGATAAAATATATCCTCTGTAGAGCCCCTTTGTCCTTCCAGTGACCACCTCATTTCTCTCCTTCCCTCTTCTAATTCTCTCCTTGAAAGCATTGTCCATGCATGCTCTCTCCAATTTCTTCGCTCTCATTCTCTTTTGAACCCATTTGGATCAGACTTTTGCCCCTGGCATTCTATAGAAACTGCACTTGTCTAGTTCACCAGTGATTCCCAATATGGCTAAATCCAATGGCCCATTTCCATTCCTAATCTTGGTTGACTTGTCATCAGCAATTGACACAGTTGATCCATTTTTTCCTCTTTGTAACATTTTTCCTCTTGGATCCTAGGATAACAACACTGTCCTGTTTTTTTCATCTCCTTCTCTAGCCAGTCTATTTCAATCTTCTTTTCTGGTTCCTCCTCATCTTGCTGACTTCTTTACGTTGGAGTGCCTCCTGGCTCAGTGCTTGGATTTCTTTTTTGGTATGTCGTTGCTAGGTACTCTCTCCCAGTCTGATGGCTTTTTACACCATGTGTGTGGTGATGACATCACGTTTGTGTCTCCAGCACTGACCTCTTGCTTCTGAATTCTAGACTCTTATAGCCAGTTGTCCATCTGACATCTCCACTTTGTTGTCTAATAGACATCTCAGACTCAACGTACCCAAAACAGAGCTCCTAAAGCTTCAGGAATCGAGACTGTGTCTATTGACATAAGGATAATAAAATTGATTAGGGGAATTAAATAAAATAGAAATAGACCAAACTTACATTGTCATTTGATTTCCAACAAAAGCACCAAAGCAATCTAATGGGAAAGAAAAGTCTTTACACGAATAGTGCTGGAATTTTCAGCAGCTCATGAAATGTATATATATTTTATGAAAAAAAGTAAAAATAAAAGTAAAAAATGGTGCTGGAACAGCTGCACATCCACATGGAAAAAATGAACCTTGACCCTTACCTCATGCTATACACAAAAATTAATTCCAGGTGAATTAAAGTTGAGCTCCCAAACCTATGCCTATGTTCTATAGACTTCTTCATTTCAGTTAAGGCAACTCTATCCTTCCAATTCATCAGGCTGAAAACCCTGGATTCCCCCTTCAGTTTTCTCTCTTCCCCACATCAACACTAGCAGTGCTTCCTGGCAGGGCTACTTTCAAAGTAGCTTCATCTCCTGCTTGGATTATGTAACAGGCTCCCAACTGGGGTTTCCACACATCTTCCTATCCCACCCTGGATGGGTTATTCTCATCAGATCACCCAGAGAAATCCTGTTTATGTATGTCAGATGATATTATTATTATTTTTATTATTTTTGAGACAGGGTCTCACTCTGTCTCTCAGGCTGCAGTACAGTAGCACGATCACAGCTTACTGCAGCCTCCACCTCCCTGGGCTCCCTACCTCAGCCTCCCAAGTAGCTAGGACTACAGGCACACACCACCACGCCTGGCTAATTGTTTGTATAATATTTTTTGTAGAGACAGGGTTTCCCCATGTTGCCTAGTCTGGTCTCAAACTCCACCCACCTCAGCCTCCCTAAGTGCTGGGATTACTGGCGTGAGCCACCGTCTCCGGCCTCAATATTATTATTTTGCTCAAAGCCTACCAGCCTCATCTCACTTAAAAGAAATGCTTCCTGTGACCCACAAAACCCGACATGACCTGCCCTCCCTATAACCCTGTGTCATGAGCACTCCGGGCACATGCCCACCTCAGGGCTTTTTATTTGCAGTTCCTGCTGTGCTCTTACCTATTTATCCACATGGTTTACTTCCCACTTCATTTAAATCTTTACCTGAATGCTACCTTCTTAGTGACACCTTTCCTGATGACCCTGTCAAAACTTATAACCCTCCTCCAACAATTCCTGCCCTTGCTTTAATGCTCTGTTTACCCCGTCGTTATCTAAAATACTATATTTTAAAATTTATCAATCTTTATCATTTATCTCCCCAGCTAGACTATAAGCTTCACAAAGGCAGGGAGTTTTACCTGTGTGATAGCCTCAGGATCAAAGACAGTACCTGGCACATTTCAGGCATTCAATACATACTTACTGAATGAAAGAATAAAGTGTGGCCAGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACTGAGGTGGGTGGATCATCTGTGGTCAGGAGTTTGAGGCCAGCCTGACGAACATGGTGAAACCCTGTCTCCACTAAAAATACAAAATTAACCGGGCATAGTGGCACATGCTTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATTGCACCATTGCACTCCAGCGTGGACAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAAAAAAAGACTAAATTGTGATTGAGGTTTACAGATGACTGGTCAGTGTTTCCCATATCCCCAAACTGTTTTCCTGCTTGATGCTATTATTTCATGGGGCAAGTTCAATTTCCTTATCCATTGCTTGACTGTCCAATTAGATTGGCAGAGCGTTAATGGCAAGGACTGTGTATCTTATCTTGTACTGTTCTATATCCTCCACTATTGCTGCCATTGTGAGGGGGAACAAGGGAGTGGCTTCCCTCCATCCAGTTCCCTACATCATATGTCATATCATACAAATATATTAGTATTTATAAATATATTAGGTCTACCTCCTTCTCTGTGCAAAATATGTCATATCAATGTCTGAGTTCTAGTATGTTCATATTCTTGGGCAATTATGTAATTATGGCTTATGTTGTCATAACTTCTATGCCCGTATTTATAAGAAAAAAATATTGAGAGCATTTCCAGGAAAATAATTGACTGGAAGAAGAGAGAGTGGTAAAAAGGAATTAATAGTGAGCTAACTATCAGTATATACAAGCCCAGCCTTCTAGGATCTGGATAACCCGAAGCAAGAATTTCTCTGTCAGTTTTCTCATCTGTATAATGGTGAGAGTGGGGGTGTTGAAGTAGAAAAATCCTTTGATTAATATTTATTCTAATCCTTGACTAGGTGCTCAGTGTTAGTCCAGGGAACTCTATCTTATTTCTTCATGGGCCAGCTTAATGTCAAGATCCAAAACTCTTGTGTAAAGCTTGGGACCATTTTCAAGGATACATTTAGTAGTTTACAATAATCTAGATAACACTGACTGATAGAAATATGCAGGAAATACAGAAAATTATAATGTGATCCACATATATAATTTAGAAGTTTTCACTAGCCATGTTATAAAAGTAAAAAGAAATCTGTGCAATCAATTTTAATAATATTTTTGTTTGCACACAAGATATACAGGGTAATCTCAACATGTAATCATATAAAATATTAATATTTTACACGTATTTTTTGTACAAAATGTTAAAAATTGGATGTGTTTTTACACGTATAGCCCATCTTAGTATGGACTGGCCTTATCTCCAGAGCTCAATAACTCTGTGTGGCTAGTGGCAGGATATTGGATATCAAGTCTAGAACATACGTGAATTAATTCAAGGTTCAAGCACATTAAGGCTGAAAGAGTTATGACTGAAGAACAAGTTCAAGGAGGAAATCAAACAATAGCCAAATTTCACTGAGCTACTCCTTCCATTACTAATGATAACAAATATTTATAGATCCCTTAGTATATACTAGGCCTGATGCTTAGAACTTTATATGAACTGTTTCATTTAATCCTCACAGCAATCTTACAAGTAAGACCTCCACCCCCTTTCAGATGAGAAAACTGAAGCACAAAAGTGCAGTAACTTGCTATTATGACTTGTGAGCATATTTTCCCAGGCAATTATATGCACAGTATGATGTAGGTAAAGCAGCCCAATAATTTATTCACTATATTTCTCCATGCTCATGGTAAGGACTGACTTGATCCCTGGTGGTCACCCACTTGTGCTCCCTCAGTGAGGGAAGGGCTGCAGAGCCCCTGGCCCGTGTCCTAGTGACTCAGGCTTGGGATCTCCAGCAGCTGCTATGGTTGACAATTTAGTTTAGTAAAATGTTAGATCCTACCCTGATAACTGTTATAAAAAATCCTCCTTCCCCTTCCCCAGCACAGGTACCCAGCCCAAGGGGCACTTTCTATGGAAAGATGAAAAGAACTGACATGGACTTGAGCTCACTGGGGGTGCAGGTTTCAAGAAAGAACAAAGAGAGCTGTTAGGTTGAAGAGACGCAGTTGAAGAGTTAAGTCTTGGAATTGTTAATACCTGGAACAAGGCACGGTGTGAAAAGACAAAGAAACACACAAACATCAATCTGTCCTCCTCTTTTCTCTTTCTGTTTCATTTCTTATCCTCCATCAGTCAGACTTTGCTTCCTCTTTCTCCTCCTTCACCTCCTCCTCCCTGCCCTTCCCAATTTCTTTCTATCTTCCATTTATTGTTCTTCCAAAATTCGTATACTCATCCTCTCTTCTCCCTTTCTCTTTTCTCCAAAATAATATGTTCAACTTACTGACTTGCTCAGGGACTTGTGGGGGCGAATGTATTAGCACCAAACCTAGGAAACATGGCGAATTCTAAAAACTTGTTCTCATAGAAAAAAGAGTTAAAAATAGAAAGCTACAGTCCAGTTTTGAAGCCACAGAAGACCTCACTCTGATGTATAGACATTAGAGTCAGAAAAAGACTTTGAAAAGACCAGTGAAGCTCCTTGTCCCACAGACAGTGTGAGGGAGGGACAAGGGGAATTGTGTGCCCAAGCGTACTTGGGATGGTGTAGGTGGCTGATAAGAGTGTCAGTGGAGGTGGTGGTTAGCATTTGGAGTGCCCCAATCTTGTGACACTAAACATTTATTGTTATACTAACCCCACTGCCAACTACCAGGAAGTTTTCATTTTTCTTACTGTGTCTTAGTCTCCATGGCATCTATAAACTGTTTTCCCCCAATGTCCAGGCATCATTCCTCTCCCACAGTTGATGTCTGGCTCTGTGCCATGGGTGTGGGCCTGCCTCTTCTCTCTCAGAATGACTGCTGTTTCATGCTTGGTGAGCCACGCAGTATGCCAAGCTGCTGTCTCTGACCTGGAGAAAGGATACCCATCCTACCACAGGTGGGGCATATCATGGGATGGCCTTCCTGGTTTTCCTTGGCAGACACATTTTTCTCACTTTTTTTTTTCTCTCCTCCCTTCTCTTTTTCCCTCCCTCTTTGATTTCTTCTCTTTTCCTTTTCTTTCTCTTGCCTCACTTCTGCCCTAGATCTACCATGGGACCCAGGGAGCTTTGGAGCCATGCAACCCACAGTGTGCTAAGCTTTTTACTCATGCTATTTCTTTTAATCTTCACAATTCTTTACCTATCAGGCATTACCATCAGATCTGCACCTTACAGGTGAGAAAGGGAGGCCCACACCGATTAAGAAATGTGCTCAGGGCCACACAGCCTGTACATGTCAGAGTAAGGGCATTCTCATGCCAAGGTTCATTTTCAGAGCCAAAAGCATACCACGTCTCAGGAGAAGCAGGCTAGATCTCTTGTCTGCTTGGCTTTTAACTCATGCTGACCTGAACTTTCTGGATTTGAGTAACTCTCAGACCTGTGGAGCCCGATTTCTGTGAGTGGATTTTGCCAGCCACCTGGGGAGGTGAACCCTTGCTGGGGTATGGCTCATTAGTGTAGAAGGGAGTTCCTTCAGAGGTACGCTGTCTTCTCGGCCATCCCCATTGTAGTAGTTTCTTGGGTCTGCCCTAACAAAGTACCACAAACTAAGAGCCGTAAAACAACAGAAGTTTATTCTGTCATAGGTCTGGAGACAGAAATCTGAATTCAAGGCACAGGCAGAGTTAGTGTCTTCTGCAGGTTCTCGGGGAGAAACCATCCCACACCTCTCCAGCTTCTGGTGGCTCCCAGCAATCCTTGGTGCTCTTTGGCTCTCAGCTGCATCCCTCTGGTCTCTGCCTCCTTGGTCATGTGGCTTTCTTCCTATGTGTCACTGCATCTCCAATCTCCTTCTTCTTATAAGGACACCAGTCATTGGATTTAGGGCCCACTCGGATCCAGCATAAAAAAAAAGTTTAAAAAAATTATTTGGAAATAATTATAGATTCACAGAAAGTAGCAAAGACAGGATATAAAGCACAGAGGTCTGATGTGTCCTGCACCCAGTTTCTCCTGTTGGTTACTTCTTACGTAATTACAGTACGATATTAAAACCAAGAATTTGACATTGATAAAATAAGTGTGTACAGTTCTATGTCATTTTATCACATGTCTAGATGCCTGCAACTACCACTGCAATCAAGATACAGATTTATCCCATGATCACAAAGATCTCCCTTTATAGTTTCGCCTACTCTTCTTTCTCCACCACCCTAACCCCTGGCAACCAGAATCTGTTCTCTATCCCTATAATTTTGTCACTTCAACAATGTTACATAAAAGGAATCACATGGTATGTGACCCTTTCAGATTGGCTTTTTTCACTCAGTAGAAAGTCCTTCAGAATCACTCCAGTTCTCTGTATCAACACTTCGTTCCTTTTTATTGCCTCATAGCATTCTATGGCATGGATATATTACAATTTGTTAGGCTAGTTGCCTATTGAGGGATGGGTTGGCTCTTTCTAGCTTTGGCTACAACAAATAAAGCTGCTGTGAACAATCATGTATGGGTTCTGTGTGGACATAAGTTTTTATTTCCTGGGGGTAAATTCCCAAGGAGTACAATTCCTGGGTCATATGGTAGGTGTCTTTTGTTTAGTTTTTCAAGAAACTGACAACTATTTTCTAGAGTAGCTATACCCTTTTATATTCCCACCAGCAATATATGAATGATCCATTTTCACCGCATCCTCACAAACATTTCAGTATGACCTAATTTTGACTTGATTACCTCTGCAAAGACCCTATTTCCAAATAAAGTCACATTTATGTGACCCATTTATGAGTACCAAGAGCAAGGAGTTGAGCATACCTTTTTGAAGGACACAATTCCACCTGCAGCACCTGTCTTCACTTGCTTAGGTTATGGGTGGGTTTCACTTCAGAGTGTTATCTTCTGAGAAGAAGGTTTGAATTCATAACTGGATTATGCCTGCCTTTGATTGTTCAATTTGGCCCCCAGGGATGAGTGAGCAAGTTCATGTCATTGGAAGGGACATTACTGAGTCTCACCCCTACTCAAACCTCCAAAGTTTGAAAGATTTGATACTCATCAACATTCTCAAGAGGCAGAAGGGCAAGGTGCTTCCTTATGTAGTTTCTCCATGACTGTCCTTCCCCACTTTCCCAGTACTGACTGGAAAGAAAAACAAAGCAGGACAAAGGGATTGTCAGTCATTTGAGGGAAGGGATGCTGTGTTAGTTACTCCTGAACCCCTTCAGAGTGTAGGCAGAGAGAGGTACTTAGAAAGGTGTGTTGGATGGATGAGTAGCTGAGAGGGGCAGGGCCAGAGTGCCCCATAGAATGAGGAAGAGTCCTCATTTACATGTGCCCTTCCCCCTTCCCAAACATGTGAGTGTTCATACATGGGTTTCCAGTGTCTGGGCAAGGTTAATTCTGTCCTCTGTCCCCTTGCTGAAGGTCTGTTTCATTTAATTTCTATGTATGTGTGCTCCTAGCTAGCCAAACAGGGCACAGATGCCAGGAAAATAGCAGGCCTGTTGTTTTGTTGAGCACCTTGAGCCCTGGAAGGCAGACTCATTCAGGGCTCAAGAGGGCAGGATTAGGCAGGTAGCTATTTGATCCCAGGCCCCCCCACTTACCAGCTGCGTGGTCTTGACCTATTACTTATTCCTCTTCTATCTATTAACTGGGTATAAGATGTTCTTTATGTGAAGTTATTTTGAAGCATAATGTGTATACAGAACAGTGCACAGATCATAACTGCACAACCCCACACGAGGAACAGAACATTACCAAGACCCCAGAAGCCCCTTCTTGTCTTCTCCCAGGCACTAACTCGCCCACCCCCAGCTAAGAGTAATTTCCATCCAAATTTCTAACTTTATTTTTACCTGGTTTTGAACTTTATATGGATGAAAACATACAGAACATATCTTTTGCATTGAGTTTCTCTTATGTAACATTATTTTTATGAGATTCATCTGTGTGAGTAGGTATAGTTGTAGCTTGTTAATTCTCCTCATTGGGTATTCTAATGTATAAACATACCACAGTTTAATAACTCATTCTATTGTTGGACAATCGGGCTATTTCCAATTTTTGGCTTTTGTAAATAAAGCTGCTTTGAACATTCTTGCATAGTTTTTTGGTGGGTGGGGACACTCAGTCATCTAGAAGTGGGATTGCTGAGTTATAGAATATATTTGTCTCTCAGCTTTATAGAACCTTTGCAACATTTTAATGAATGTTTTTAATCTCACAGTATAGTGTGGATTAAATTAGGTTGTGGAAAGTACTCAATACGGCCCTTGGCAGACAGGAGTCCCTCAGTACCTGTTTAAAAATGTAAATAAGGCATGACATTCCATTAAGTCTAAGTACCATGATGAACTTAAACATTTCCCTATTGTTTGTTTATTTAATTGCTTTTATTGTGTTGTTATTTTATATCATGTTGCAATGAATGATTCTCTTTATAGCAGGTTTCTTCTTTTGAAAAATTTGCTTTGGTTGATTCTCAGGGAATTGAATCAAAGGATATATGACTGTAAGACCTGTCACCCTTAAAAAGGACTATGAGGGCTTGCTGAGGAGGGGAAAACAAGGAAGCAAGTCTCTCCTACCATGGCCCAGGGGACTGTGAGGACAGAAGGCTTGTGGGTTTGAGGGAGGACTGTCTTGCAGAGGATGATAGGGTAAAATAGAATGAAGGATGATTTTTATAAATGGTTATGCGCCTTAGGATGACTACATATTTAGTCCCTTATAAGAGAAATTGAGTAGTTGGTAAAACAACAGATAATAATTATTAAATGAGGAAAGAGAGAAACCACAGGTGCAAAGATTCACTTTATTTATTCATTCTCCTCCAACATTAGCATAATTAAAGCCAAGGAGGAGGAGGGGGGTGAGGTGAAAGATGAGCTGGAGGACCGCAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCCCTGATGGGTGACTTCGCAGGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGCTGCTGAGGCTGTAGGTGCTGTCCTTGCTGTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATGAAGACAGATGGTGCAGCCACAGTTCCTGAGGAAAGAAGCAAACAGGATGGTGTTTAAGTAACAAAGTTCTGCCCTTGGGTGTGTTGTTTGCGGATAATCACAGGGCATGTTAGGGACAGACAGAAAACAGCATGCTTATCCCAGATAATTATAGCAAGGAGACCAAGAAGCGTATTTAAAATCTTGATGTTTTGAGTTTCTTCCTAGCTTCCCCCTATTCCTTAATAAAGTTCTAAATTGTTTTGTTGGAGCTCTTTGCAGCCATTCTGAGGGCTTTGCATGCTTTTCTGACCTTGCAGTAAACTCAATGCTTTAGGCAAAGAATGGCCACGTCATCCGACCCCCTCAGAGTTTAGAATTCAGAACAGGTCTGAAGAAGACCAGGCAGCGGCTGAGTCAAGGAAAGCCTCCGTCCGCTTTTATTTCCCCTGTGCCTCTTCCAGGACTGTGCTGGGATAACAGGCTCCCGGGGGTTACTTTGGCTGGGCTGGGCTAAAACCTCCCTGCAGAGCAGGCCCTGAGCCCTGCCTCTGCGCCTGGGTGGTGTCAGCCCCTCCACCTTCTGACTGTTCCAGCAACTCTCTAAGCCCTCCCAAAGGCCTCAAGGCCTGTAACCATATGCAGCAATTTTCAGCCATACCAGGAGAGGTCAACTGTAATCTTGGCCACCTGCCTAAGAGGAAGTGGCTAGCTTCACTTCTGACCCTCAGCAACTGCCAGGTGGCCTCTTGGAAATCCCCCTCTGGGGGATTCCACCCGTTGGGTGGGAGAGCAGTAGTTAAAATGTAAAATAAGAATCTTTTGCTGGGAGAAGTCAACAGATAGGGAGAAGTCAGCTGATAACAGAAATAGTTTTTTTTTTTTTTAAAACTAACTTCACTGTTAACCAAGCAGTTCAACATGAAAGACTGAATCTCTTATGTTTAATATTTTCTTCTCTTTTAATCTTCATAACTAATTTTTTTCAGATAATTGTATAAAATAACCATGGTAGCAAAATAATGTGATCACTGGAAAATAAGCAGGGAAAAACATGCTATGAAGATACTCCTATCTGGGTGAATTCTTGATAGCTTTACATTTTTCATCTGGCATTTAAACATTAAACAGTTAATGTATTTGACATGAAAATTATTTCAAGTTATCTTATTAGTTTTAATAGAGTTTAAAAAGTGTTTAAAAGAGTTTTCAAAAGGCTCTAAAATCATTTTGAAATAGTTTAAAACAGTTTTGAATCGTTGTAAGTTAGTTTTAATAGAGCTTTAAAAAGGCCCTAAAATAGTCCTATCAAGTTGTTGCAGACCAAAATAATCTCCTTAAATATCACTTTTGAGATCAGCTGGGGTAAACGACAGCAACACAATGACAAATCATTAAACTATTTTAGAGATTATGAAATTAAAATACTCAGATTAAAATTTTCCTATCACAGAATTAAGGTACTGGAAAATATGTTTAAGTTTTTATTAATCACATTGCTATAGGTTTAGATATTTTGTACAACTGAAATAAAATCACACACTGGCAGCTACATTTTTGAAAGTTAAAAACATGGTCACGAATATATCTTATTTTAAAATCAGTTAATATACCTTAATGGTATTTAATGCCAAATTCAAAGTGAATTGATCAAGCCCTCAGTGGCCAGGTCATGGGTGTGATTTTTACTCTGAAAGAATTACATATTTCTTTCTTTTTGGTTGAGCTTTTGTTATTTAAATACATTTGATGAGAGGATATTGAAATAATTAAATAGCACTGAAAAAAAAAAAGCTTTAAATTATTTACAATCCCCTAATGGAAATTTTCACTAATGAGATATCATAATGAATGTGAATTTTATTTCTGAAATCTCTAATAAATCAGTCTTCTCCCTGGTTTTCCCAGCTCAGCGCCCATTACGTTTCTGTTCTCTTTCCCTTAGTGGCATTATTTGTATCACTGTGCATC	GAG	20	PASS	ClusterIDs=HG4_Ill_Krunchall_2867:HG3_PB_pbsv_2048:HG4_PB_pbsv_2078:HG4_10X_allpass_356:HG2_PB_pbsv_2059:HG2_Ill_tnscope_214:HG2_PB_SVrefine2PBcRplusDovetail_5729:HG2_10X_SVrefine210Xhap12_1563:HG2_Ill_MetaSV_2549:HG2_10X_allpass_307:HG4_Ill_Krunchall_2868:HG3_Ill_Krunchall_2763:HG2_Ill_Krunchall_2734:HG3_Ill_MetaSV_2692:HG4_Ill_MetaSV_2642;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1563:HG2_PB_SVrefine2PBcRplusDovetail_5729;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0863481;ClusterMaxSizeDiff=0.0863481;ClusterMaxEditDist=0.0863481;PBcalls=4;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-26836;DistBack=-401381;DistForward=-26838;DistMin=-401381;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:89132283-89159121;PctSeqSimilarity=0.972;PctSizeSimilarity=0.9999;PctRecOverlap=0.9999;SizeDiff=-3;StartDistance=2;EndDistance=1;GTMatch=0;TruScore=99;MatchId=1963.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:73:./.:3:19:11:13:./.:2:2:2:0:0/1:11:18:0/1:58:23:401319:.:.
chr2	96750866	HG3_PB_SVrefine2Falcon1Dovetail_1296	ACAGTGCCAGGCGCCCAGCTAGGCTGGGCAACCCAGACTCTCCTTTTGGTATGAGGCCAAGTTTCACCCCTGAGCAGCCAGGAAGAGAGTGGAGCCAGGCACTTTCTCAGGACAGGAAGCATTGCTGACCGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1571:HG3_PB_pbsv_2067:HG2_PB_pbsv_2078:HG4_PB_pbsv_2095:HG4_PB_SVrefine2PBcRDovetail_1112:HG4_PB_SVrefine2Falcon1Dovetail_1246:HG3_PB_SVrefine2PBcRDovetail_1082:HG3_PB_SVrefine2Falcon1Dovetail_1296:HG3_Ill_SVrefine2DISCOVARDovetail_1434:HG3_Ill_250bpfermikitraw_2726:HG2_PB_SVrefine2PBcRplusDovetail_5745:HG2_PB_SVrefine2PB10Xhap12_1616:HG2_PB_SVrefine2Falcon1plusDovetail_6232:HG2_Ill_SVrefine2DISCOVARplusDovetail_6724:HG2_Ill_250bpfermikitraw_2737:HG2_Ill_150bpfermikitraw_2518:HG2_10X_allpass_309;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1571:HG4_PB_SVrefine2PBcRDovetail_1112:HG4_PB_SVrefine2Falcon1Dovetail_1246:HG3_PB_SVrefine2PBcRDovetail_1082:HG3_PB_SVrefine2Falcon1Dovetail_1296:HG3_Ill_SVrefine2DISCOVARDovetail_1434:HG3_Ill_250bpfermikitraw_2726:HG2_PB_SVrefine2PBcRplusDovetail_5745:HG2_PB_SVrefine2PB10Xhap12_1616:HG2_PB_SVrefine2Falcon1plusDovetail_6232:HG2_Ill_SVrefine2DISCOVARplusDovetail_6724:HG2_Ill_250bpfermikitraw_2737:HG2_Ill_150bpfermikitraw_2518:HG2_10X_allpass_309;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0153846;ClusterMaxSizeDiff=0.0152672;ClusterMaxEditDist=0.0307692;PBcalls=10;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-131;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=134;REFWIDENED=2:96750867-96751131;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1964.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:2:25:0:18:./.:0:1:0:5:1/1:0:30:./.:.:.:.:.:.
chr2	97438346	HG2_PB_assemblyticsPBcR_13342	GCACACACACTCATACCCCCACATAGGCACAGGCAGGCGCTCACACACACATGCGTGCACACACA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_13342:HG2_PB_pbsv_2081:HG4_PB_pbsv_2099:HG4_Ill_150bpfermikitraw_2660;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsPBcR_13342:HG4_Ill_150bpfermikitraw_2660;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0483871;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.0967742;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-64;DistBack=46440;DistForward=2286;DistMin=2286;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=118;REFWIDENED=2:97438345-97438529;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1965.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:21:0|1:10:1:2:12:./.:1:2:4:1:./.:2:0:./.:.:.:.:.:.
chr2	99752964	HG3_PB_SVrefine2PBcRDovetail_1086	CAAAAAAAGTATTTCTGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1581:HG3_PB_assemblyticsfalcon_13821:HG2_PB_assemblyticsPBcR_13351:HG2_PB_HySA_3916:HG4_Ill_Krunchall_2912:HG4_PB_assemblyticsfalcon_13598:HG2_PB_assemblyticsfalcon_13754:HG3_PB_pbsv_2080:HG4_PB_pbsv_2111:HG4_Ill_MetaSV_2660:HG3_PB_HySA_3172:HG3_Ill_MetaSV_2708:HG2_Ill_tnscope_217:HG2_Ill_MetaSV_2562:HG4_PB_SVrefine2Falcon1Dovetail_1251:HG4_Ill_manta_494:HG4_Ill_GATKHCSBGrefine_1420:HG4_10X_allpass_359:HG3_PB_SVrefine2PBcRDovetail_1086:HG3_PB_SVrefine2Falcon1Dovetail_1301:HG3_Ill_scalpel_2054:HG3_Ill_SVrefine2DISCOVARDovetail_1448:HG3_Ill_GATKHCSBGrefine_1369:HG2_PB_pbsv_2093:HG2_PB_SVrefine2PBcRplusDovetail_5754:HG2_PB_SVrefine2PB10Xhap12_1625:HG2_PB_SVrefine2Falcon2Bionano_810:HG2_PB_SVrefine2Falcon1plusDovetail_6238:HG2_Ill_scalpel_1928:HG2_Ill_manta_568:HG2_Ill_breakscan11_275:HG2_Ill_SVrefine2DISCOVARplusDovetail_6730:HG2_Ill_GATKHCSBGrefine_1370:HG2_10X_allpass_310;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1581:HG4_PB_SVrefine2Falcon1Dovetail_1251:HG4_Ill_manta_494:HG4_Ill_GATKHCSBGrefine_1420:HG4_10X_allpass_359:HG3_PB_SVrefine2PBcRDovetail_1086:HG3_PB_SVrefine2Falcon1Dovetail_1301:HG3_Ill_scalpel_2054:HG3_Ill_SVrefine2DISCOVARDovetail_1448:HG3_Ill_GATKHCSBGrefine_1369:HG2_PB_pbsv_2093:HG2_PB_SVrefine2PBcRplusDovetail_5754:HG2_PB_SVrefine2PB10Xhap12_1625:HG2_PB_SVrefine2Falcon2Bionano_810:HG2_PB_SVrefine2Falcon1plusDovetail_6238:HG2_Ill_scalpel_1928:HG2_Ill_manta_568:HG2_Ill_breakscan11_275:HG2_Ill_SVrefine2DISCOVARplusDovetail_6730:HG2_Ill_GATKHCSBGrefine_1370:HG2_10X_allpass_310;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0940819;ClusterMaxSizeDiff=0.0940819;ClusterMaxEditDist=0.0940819;PBcalls=16;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=15040;DistForward=-40;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:99752965-99753316;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1966.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:0:11:0:5:./.:0:15:0:2:1/1:0:29:0/1:3:12:.:.:.
chr2	101975203	HG4_PB_assemblyticsfalcon_13611	TGAGAACTGAGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA	T	20	PASS	ClusterIDs=HG4_PB_HySA_3151:HG3_10X_allpass_390:HG2_PB_assemblyticsPBcR_13367:HG3_Ill_Krunchall_2815:HG2_Ill_Krunchall_2783:HG3_PB_assemblyticsfalcon_13836:HG2_PB_assemblyticsfalcon_13770:HG4_Ill_Spiral_162:HG3_Ill_Spiral_2189:HG2_PB_HySA_3932:HG2_Ill_Spiral_127:HG3_PB_HySA_3185:HG4_Ill_MetaSV_2664:HG3_Ill_MetaSV_2711:HG2_Ill_tnscope_218:HG2_Ill_MetaSV_2565:HG4_PB_pbsv_2115:HG4_PB_assemblyticsfalcon_13611:HG4_PB_SVrefine2PBcRDovetail_1121:HG4_PB_SVrefine2Falcon1Dovetail_1253:HG4_Ill_scalpel_1885:HG4_Ill_GATKHCSBGrefine_1429:HG3_PB_pbsv_2085:HG3_PB_SVrefine2Falcon1Dovetail_1304:HG3_Ill_manta_442:HG3_Ill_SVrefine2DISCOVARDovetail_1455:HG3_Ill_GATKHCSBGrefine_1375:HG2_PB_pbsv_2096:HG2_PB_SVrefine2PBcRplusDovetail_5758:HG2_PB_SVrefine2PB10Xhap12_1626:HG2_PB_SVrefine2Falcon2Bionano_812:HG2_PB_SVrefine2Falcon1plusDovetail_6241:HG2_Ill_manta_571:HG2_Ill_SVrefine2DISCOVARplusDovetail_6739:HG2_Ill_GATKHCSBGrefine_1376:HG2_10X_allpass_311:HG2_10X_SVrefine210Xhap12_1590:HG2_Ill_breakscan11_277;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1590:HG2_10X_allpass_311:HG2_Ill_GATKHCSBGrefine_1376:HG2_Ill_SVrefine2DISCOVARplusDovetail_6739:HG2_Ill_manta_571:HG2_PB_SVrefine2Falcon1plusDovetail_6241:HG2_PB_SVrefine2Falcon2Bionano_812:HG2_PB_SVrefine2PB10Xhap12_1626:HG2_PB_SVrefine2PBcRplusDovetail_5758:HG2_PB_pbsv_2096:HG3_Ill_GATKHCSBGrefine_1375:HG3_Ill_SVrefine2DISCOVARDovetail_1455:HG3_Ill_manta_442:HG3_PB_SVrefine2Falcon1Dovetail_1304:HG3_PB_pbsv_2085:HG4_Ill_GATKHCSBGrefine_1429:HG4_Ill_scalpel_1885:HG4_PB_SVrefine2Falcon1Dovetail_1253:HG4_PB_SVrefine2PBcRDovetail_1121:HG4_PB_assemblyticsfalcon_13611:HG4_PB_pbsv_2115;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0638298;ClusterMaxSizeDiff=0.0638298;ClusterMaxEditDist=0.0638298;PBcalls=17;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=17416;DistForward=30834;DistMin=17416;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=2:101975204-101975547;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1967.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:71:1/1:4:30:0:30:1/1:0:17:0:15:1/1:0:32:0/1:2:14:.:.:.
chr2	102069440	HG3_Ill_MetaSV_2712	GCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAAGCTACTAGGGAGGCTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCATCCTGGTGACAGAGCGAGACTCCATCTCAAAACAAACAAACAAACTTAGCCAGGCATGGTGGCACACA	G	20	PASS	ClusterIDs=HG2_10X_allpass_312:HG4_PB_SVrefine2PBcRDovetail_1122:HG2_PB_assemblyticsfalcon_13773:HG2_PB_SVrefine2PBcRplusDovetail_5759:HG2_PB_SVrefine2PB10Xhap12_1627:HG2_PB_SVrefine2Falcon2Bionano_813:HG2_PB_SVrefine2Falcon1plusDovetail_6242:HG4_Ill_SVrefine2DISCOVARDovetail_1528:HG3_Ill_SVrefine2DISCOVARDovetail_1456:HG2_Ill_SVrefine2DISCOVARplusDovetail_6740:HG2_10X_SVrefine210Xhap12_1591:HG2_PB_assemblyticsPBcR_13369:HG3_PB_assemblyticsfalcon_13839:HG3_PB_SVrefine2Falcon1Dovetail_1305:HG4_PB_SVrefine2Falcon1Dovetail_1254:HG4_PB_assemblyticsfalcon_13614:HG4_PB_HySA_3153:HG4_Ill_Krunchall_2928:HG3_Ill_Krunchall_2819:HG2_PB_pbsv_2097:HG3_PB_HySA_3190:HG2_PB_HySA_3940:HG3_PB_pbsv_2086:HG2_PB_HySA_3939:HG4_PB_pbsv_2116:HG4_Ill_MetaSV_2665:HG2_PB_HySA_3938:HG2_Ill_MetaSV_2566:HG4_Ill_scalpel_1887:HG4_Ill_manta_497:HG4_Ill_GATKHCSBGrefine_1430:HG4_10X_allpass_361:HG3_Ill_scalpel_2069:HG3_Ill_manta_443:HG3_Ill_MetaSV_2712:HG3_Ill_GATKHCSBGrefine_1376:HG3_10X_allpass_391:HG2_Ill_scalpel_1945:HG2_Ill_manta_572:HG2_Ill_GATKHCSBGrefine_1377;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_312:HG4_Ill_scalpel_1887:HG4_Ill_manta_497:HG4_Ill_GATKHCSBGrefine_1430:HG4_10X_allpass_361:HG3_Ill_scalpel_2069:HG3_Ill_manta_443:HG3_Ill_MetaSV_2712:HG3_Ill_GATKHCSBGrefine_1376:HG3_10X_allpass_391:HG2_Ill_scalpel_1945:HG2_Ill_manta_572:HG2_Ill_GATKHCSBGrefine_1377;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0573066;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.219718;PBcalls=19;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-172;DistBack=1858;DistForward=15840;DistMin=1858;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=134;REFWIDENED=2:102069441-102069746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1968.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:1/1:0:12:0:12:./.:0:10:1:7:1/1:0:12:./.:.:.:.:.:.
chr2	102097838	HG4_Ill_SVrefine2DISCOVARDovetail_1529	ACCTGCTTAAGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1592:HG4_PB_HySA_3154:HG4_PB_assemblyticsfalcon_13616:HG2_PB_assemblyticsPBcR_13370:HG4_Ill_Krunchall_2931:HG3_Ill_Krunchall_2820:HG2_PB_pbsv_2098:HG2_Ill_Krunchall_2789:HG3_PB_assemblyticsfalcon_13841:HG2_PB_assemblyticsfalcon_13774:HG3_PB_HySA_3192:HG4_PB_pbsv_2117:HG3_PB_pbsv_2087:HG2_PB_HySA_3942:HG4_Ill_MetaSV_2666:HG3_Ill_MetaSV_2713:HG2_Ill_tnscope_219:HG4_PB_SVrefine2PBcRDovetail_1123:HG4_PB_SVrefine2Falcon1Dovetail_1255:HG4_Ill_scalpel_1890:HG4_Ill_manta_498:HG4_Ill_SVrefine2DISCOVARDovetail_1529:HG4_Ill_GATKHCSBGrefine_1431:HG4_10X_allpass_362:HG3_PB_SVrefine2Falcon1Dovetail_1306:HG3_Ill_scalpel_2072:HG3_Ill_manta_444:HG3_Ill_SVrefine2DISCOVARDovetail_1457:HG3_Ill_GATKHCSBGrefine_1377:HG3_10X_allpass_392:HG2_PB_SVrefine2PBcRplusDovetail_5760:HG2_PB_SVrefine2PB10Xhap12_1628:HG2_PB_SVrefine2Falcon2Bionano_814:HG2_PB_SVrefine2Falcon1plusDovetail_6243:HG2_Ill_scalpel_1948:HG2_Ill_manta_573:HG2_Ill_breakscan11_278:HG2_Ill_SVrefine2DISCOVARplusDovetail_6741:HG2_Ill_MetaSV_2568:HG2_Ill_GATKHCSBGrefine_1378:HG2_10X_allpass_313;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1592:HG4_PB_SVrefine2PBcRDovetail_1123:HG4_PB_SVrefine2Falcon1Dovetail_1255:HG4_Ill_scalpel_1890:HG4_Ill_manta_498:HG4_Ill_SVrefine2DISCOVARDovetail_1529:HG4_Ill_GATKHCSBGrefine_1431:HG4_10X_allpass_362:HG3_PB_SVrefine2Falcon1Dovetail_1306:HG3_Ill_scalpel_2072:HG3_Ill_manta_444:HG3_Ill_SVrefine2DISCOVARDovetail_1457:HG3_Ill_GATKHCSBGrefine_1377:HG3_10X_allpass_392:HG2_PB_SVrefine2PBcRplusDovetail_5760:HG2_PB_SVrefine2PB10Xhap12_1628:HG2_PB_SVrefine2Falcon2Bionano_814:HG2_PB_SVrefine2Falcon1plusDovetail_6243:HG2_Ill_scalpel_1948:HG2_Ill_manta_573:HG2_Ill_breakscan11_278:HG2_Ill_SVrefine2DISCOVARplusDovetail_6741:HG2_Ill_MetaSV_2568:HG2_Ill_GATKHCSBGrefine_1378:HG2_10X_allpass_313;NumExactMatchSVs=25;ClusterMaxShiftDist=0.113846;ClusterMaxSizeDiff=0.113846;ClusterMaxEditDist=0.113846;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-418;DistForward=48272;DistMin=-418;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:102097839-102098180;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1969.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:1/1:1:32:0:19:1/1:0:10:0:5:1/1:0:34:./.:2:5:.:.:.
chr2	102402129	HG3_10X_allpass_393	TTTCTTTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTTTCTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_2089:HG3_Ill_GATKHC_3478:HG3_Ill_GATKHCSBGrefine_1378:HG2_PB_pbsv_2100:HG2_Ill_GATKHC_3379:HG2_Ill_GATKHCSBGrefine_1379:HG2_PB_SVrefine2Falcon2Bionano_816:HG3_Ill_svaba_2634:HG3_Ill_SVrefine2DISCOVARDovetail_1459:HG3_Ill_MetaSV_2714:HG3_10X_allpass_393:HG2_PB_SVrefine2PB10Xhap12_1631:HG2_Ill_svaba_2546:HG2_Ill_SpiralSDKrefine_8701:HG2_Ill_SVrefine2DISCOVARplusDovetail_6743:HG2_10X_allpass_314:HG2_10X_SVrefine210Xhap12_1593;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1593:HG2_10X_allpass_314:HG2_Ill_SVrefine2DISCOVARplusDovetail_6743:HG2_Ill_SpiralSDKrefine_8701:HG2_Ill_svaba_2546:HG2_PB_SVrefine2PB10Xhap12_1631:HG3_10X_allpass_393:HG3_Ill_MetaSV_2714:HG3_Ill_SVrefine2DISCOVARDovetail_1459:HG3_Ill_svaba_2634;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0358423;ClusterMaxSizeDiff=0.0358423;ClusterMaxEditDist=0.0358423;PBcalls=4;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-140;DistBack=7258;DistForward=-136;DistMin=-136;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=2:102402117-102402277;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9929;PctRecOverlap=0.9291;SizeDiff=1;StartDistance=9;EndDistance=10;GTMatch=0;TruScore=96;MatchId=1970.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:33:./.:24:9:2:15:0|1:27:0:0:18:0/1:17:14:./.:.:.:.:.:.
chr2	103322483	HG3_Ill_manta_446	TAAGAATGAGTTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCATTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_279:HG4_PB_HySA_3162:HG4_Ill_Krunchall_2941:HG3_Ill_Krunchall_2830:HG2_Ill_Krunchall_2801:HG4_PB_assemblyticsfalcon_13626:HG3_PB_assemblyticsfalcon_13849:HG2_PB_assemblyticsPBcR_13381:HG2_PB_assemblyticsfalcon_13785:HG2_PB_pbsv_2105:HG4_PB_pbsv_2122:HG2_PB_HySA_3951:HG4_Ill_MetaSV_2668:HG3_PB_HySA_3204:HG3_Ill_MetaSV_2716:HG2_Ill_tnscope_220:HG2_Ill_MetaSV_2570:HG4_PB_SVrefine2PBcRDovetail_1127:HG4_PB_SVrefine2Falcon1Dovetail_1259:HG4_Ill_scalpel_1899:HG4_Ill_manta_500:HG4_Ill_SVrefine2DISCOVARDovetail_1535:HG4_Ill_GATKHCSBGrefine_1435:HG4_10X_allpass_363:HG3_PB_pbsv_2092:HG3_PB_SVrefine2Falcon1Dovetail_1310:HG3_Ill_scalpel_2079:HG3_Ill_manta_446:HG3_Ill_SVrefine2DISCOVARDovetail_1463:HG3_Ill_GATKHCSBGrefine_1381:HG3_10X_allpass_394:HG2_PB_SVrefine2PBcRplusDovetail_5765:HG2_PB_SVrefine2PB10Xhap12_1636:HG2_PB_SVrefine2Falcon2Bionano_819:HG2_PB_SVrefine2Falcon1plusDovetail_6249:HG2_Ill_scalpel_1957:HG2_Ill_manta_576:HG2_Ill_SVrefine2DISCOVARplusDovetail_6746:HG2_Ill_GATKHCSBGrefine_1382:HG2_10X_allpass_315:HG2_10X_SVrefine210Xhap12_1596;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1596:HG2_10X_allpass_315:HG2_Ill_GATKHCSBGrefine_1382:HG2_Ill_SVrefine2DISCOVARplusDovetail_6746:HG2_Ill_manta_576:HG2_Ill_scalpel_1957:HG2_PB_SVrefine2Falcon1plusDovetail_6249:HG2_PB_SVrefine2Falcon2Bionano_819:HG2_PB_SVrefine2PB10Xhap12_1636:HG2_PB_SVrefine2PBcRplusDovetail_5765:HG3_10X_allpass_394:HG3_Ill_GATKHCSBGrefine_1381:HG3_Ill_SVrefine2DISCOVARDovetail_1463:HG3_Ill_manta_446:HG3_Ill_scalpel_2079:HG3_PB_SVrefine2Falcon1Dovetail_1310:HG3_PB_pbsv_2092:HG4_10X_allpass_363:HG4_Ill_GATKHCSBGrefine_1435:HG4_Ill_SVrefine2DISCOVARDovetail_1535:HG4_Ill_manta_500:HG4_Ill_scalpel_1899:HG4_PB_SVrefine2Falcon1Dovetail_1259:HG4_PB_SVrefine2PBcRDovetail_1127;NumExactMatchSVs=24;ClusterMaxShiftDist=0.075643;ClusterMaxSizeDiff=0.075643;ClusterMaxEditDist=0.075643;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=10232;DistForward=124160;DistMin=10232;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:103322484-103322831;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1971.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:1/1:1:19:0:10:1/1:0:18:0:21:1/1:0:48:./.:1:15:.:.:.
chr2	104186940	HG3_Ill_SVrefine2DISCOVARDovetail_1468	CTGTAATTTCACATTCTCTTTCCTCTGTATATGTCATATTTTTTGGTCATAATTTCTCCTTTTAGTAAGGACACCAGTCATATTGGATTAGGGCCCATCACTTCTTATCCACTAGAATGACTATTTAAAAAGTAAAAGATAATAAGTGTTAGCAAAGATGCAGAGAAATCTGAACTCAAGTACATTGCTGGTGGGAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1598:HG2_PB_pbsv_2107:HG4_PB_HySA_3165:HG4_PB_pbsv_2124:HG3_PB_pbsv_2094:HG2_PB_HySA_3953:HG4_Ill_MetaSV_2669:HG4_PB_SVrefine2PBcRDovetail_1129:HG4_PB_SVrefine2Falcon1Dovetail_1261:HG4_Ill_SVrefine2DISCOVARDovetail_1541:HG4_Ill_GATKHCSBGrefine_1438:HG4_Ill_250bpfermikitraw_2797:HG4_Ill_150bpfermikitraw_2703:HG4_10X_allpass_364:HG3_PB_SVrefine2Falcon1Dovetail_1312:HG3_Ill_SVrefine2DISCOVARDovetail_1468:HG3_Ill_GATKHCSBGrefine_1384:HG3_10X_allpass_395:HG2_PB_SVrefine2PB10Xhap12_1637:HG2_Ill_SVrefine2DISCOVARplusDovetail_6751:HG2_Ill_GATKHCSBGrefine_1385;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1598:HG4_PB_SVrefine2PBcRDovetail_1129:HG4_PB_SVrefine2Falcon1Dovetail_1261:HG4_Ill_SVrefine2DISCOVARDovetail_1541:HG4_Ill_GATKHCSBGrefine_1438:HG4_Ill_250bpfermikitraw_2797:HG4_Ill_150bpfermikitraw_2703:HG4_10X_allpass_364:HG3_PB_SVrefine2Falcon1Dovetail_1312:HG3_Ill_SVrefine2DISCOVARDovetail_1468:HG3_Ill_GATKHCSBGrefine_1384:HG3_10X_allpass_395:HG2_PB_SVrefine2PB10Xhap12_1637:HG2_Ill_SVrefine2DISCOVARplusDovetail_6751:HG2_Ill_GATKHCSBGrefine_1385;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0255754;ClusterMaxSizeDiff=0.0255754;ClusterMaxEditDist=0.0309278;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-196;DistBack=51151;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=198;REFWIDENED=2:104186941-104187334;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1972.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:23:0|1:22:1:4:20:./.:0:5:24:1:0/1:27:14:./.:.:.:.:.:.
chr2	105825891	HG3_PB_pbsv_2100	TGAGTCTAAGTCTCTTTTTTTTTTTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTTTTTTTTTTTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCACCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACCTCTATCCACACAGACCCGGCAACCATCTGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCATCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGTTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCCCCCCTCACCTCCCGGATGGGGCGGATGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCAGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCATGCGGAGAGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCCGGGGGGGTCTGAACTCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGTCGGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACAGGGTTGTGGCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTTCTCACTTCCTAGATGGGATGGCAGCGGGGAAGAGGCGCTCCTCGCTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGCTCCTCATATCCCAGACGATGGGGGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCTGGGCAGAGGCTGCAATCTCGGCACTTTGGGGGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCAGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGTGCGCCTGCAATGGCAGGCACTGGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCGTGGAAGGAGACCGTGGAGAGAGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1316:HG4_10X_allpass_365:HG2_PB_assemblyticsfalcon_13802:HG4_PB_assemblyticsfalcon_13635:HG3_PB_assemblyticsfalcon_13863:HG2_PB_assemblyticsPBcR_13397:HG2_PB_pbsv_2112:HG3_10X_allpass_396:HG2_Ill_MetaSV_2571:HG4_PB_pbsv_2128:HG4_PB_SVrefine2PBcRDovetail_1131:HG4_PB_SVrefine2Falcon1Dovetail_1263:HG4_Ill_MetaSV_2670:HG4_Ill_GATKHCSBGrefine_1440:HG3_PB_pbsv_2100:HG3_Ill_MetaSV_2717:HG3_Ill_GATKHCSBGrefine_1387:HG2_PB_SVrefine2PBcRplusDovetail_5772:HG2_PB_SVrefine2PB10Xhap12_1640:HG2_PB_SVrefine2Falcon2Bionano_823:HG2_PB_SVrefine2Falcon1plusDovetail_6255:HG2_10X_SVrefine210Xhap12_1603;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1603:HG2_PB_SVrefine2Falcon1plusDovetail_6255:HG2_PB_SVrefine2Falcon2Bionano_823:HG2_PB_SVrefine2PB10Xhap12_1640:HG2_PB_SVrefine2PBcRplusDovetail_5772:HG3_Ill_GATKHCSBGrefine_1387:HG3_Ill_MetaSV_2717:HG3_PB_pbsv_2100:HG4_Ill_GATKHCSBGrefine_1440:HG4_Ill_MetaSV_2670:HG4_PB_SVrefine2Falcon1Dovetail_1263:HG4_PB_SVrefine2PBcRDovetail_1131:HG4_PB_pbsv_2128;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0126532;ClusterMaxSizeDiff=0.0126532;ClusterMaxEditDist=0.0126532;PBcalls=14;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2535;DistBack=5878;DistForward=-1398;DistMin=-1398;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:105825892-105828442;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1973.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:0:10:0:13:1/1:0:5:0:6:1/1:0:21:1/1:4:177:2546:.:.
chr2	106695077	HG3_PB_assemblyticsfalcon_13871	ATTTGGGTGAGGGAGAGGGAGGATAAGAAGACGGGGGAGGTGAGTGAAGAATCTGAGCCTTTGCTGATAGGAGGGGGTCTGGTCCCAGACTACGCAGAACTGCAGGGGGTGAGGTGGGGGAGGAGATTAACAGCATGAGGGGGGCAACTCAGAATGGGTCTCAGACTTTTGTATGTCACAGACTCCTCCGACAGTCTGAAAGCTTTTTGCTCTTTTCCTCAGAAAAATTACATGCAATTTTGCAGATAGCCTCTGAAACACACCCCCATTCACAAACCCTATGTAATCAATAACCCTAGGCCCAGTAGGAAGCACTGGATTCAGAGCAGCGGTGTTACGGACAATCATAAACAAAGGTCATTCTTTTCTTCTTGGGGATTCATATAAATTAAAATTGTAGTGAAATATACATGAAAGTTACCCTTTTAAGCATTTTCGGGTGTACAATTCGGTGGCTAAGTATATTCACATTGTTGTGCAACCGTCACTACCATCCGTCCATCTCTGGAACTTTTTCATCTTCCCAAACTGATACTGTATCCTTTAAACACTAACTCCCCATTTCTATCCCCAACCCCTGGCAACCCCCATTCTACTTTCAGTCTCTACGAATGTCCACTCTAGGGACTTCATATAAGTAGTGTAATACAGTATTTGTCTTTTTGTGTCTGGCTTATTTCACTTAGCTTAATGACCTCAAGGTTCATCCATGTTGCAGCATGTGTCAGAATTTCATTCCTTTTTAAGGCAGAATAATATTCCATTGTATGGATAGGCCACTTTTGCTTATCCATTCACCCATTCATGGATACTCGGGC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_2107:HG2_Ill_tnscope_221:HG4_PB_pbsv_2135:HG4_PB_assemblyticsfalcon_13644:HG4_PB_SVrefine2Falcon1Dovetail_1267:HG4_Ill_manta_501:HG4_Ill_MetaSV_2672:HG4_Ill_GATKHCSBGrefine_1443:HG4_10X_allpass_366:HG3_PB_assemblyticsfalcon_13871:HG3_PB_SVrefine2Falcon1Dovetail_1320:HG3_Ill_manta_450:HG3_Ill_SVrefine2DISCOVARDovetail_1477:HG3_Ill_MetaSV_2719:HG3_Ill_GATKHCSBGrefine_1393:HG3_10X_allpass_397:HG2_PB_pbsv_2117:HG2_PB_assemblyticsfalcon_13813:HG2_PB_SVrefine2PBcRplusDovetail_5775:HG2_PB_SVrefine2PB10Xhap12_1642:HG2_PB_SVrefine2Falcon2Bionano_826:HG2_PB_SVrefine2Falcon1plusDovetail_6258:HG2_Ill_manta_580:HG2_Ill_SpiralSDKrefine_8725:HG2_Ill_SVrefine2DISCOVARplusDovetail_6762:HG2_Ill_MetaSV_2573:HG2_Ill_GATKHCSBGrefine_1391:HG2_10X_allpass_317:HG2_10X_SVrefine210Xhap12_1608:HG3_Ill_Krunchall_2861:HG2_Ill_breakscan11_281:HG2_Ill_Krunchall_2833:HG2_PB_assemblyticsPBcR_13407;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1608:HG2_10X_allpass_317:HG2_Ill_GATKHCSBGrefine_1391:HG2_Ill_MetaSV_2573:HG2_Ill_SVrefine2DISCOVARplusDovetail_6762:HG2_Ill_SpiralSDKrefine_8725:HG2_Ill_manta_580:HG2_PB_SVrefine2Falcon1plusDovetail_6258:HG2_PB_SVrefine2Falcon2Bionano_826:HG2_PB_SVrefine2PB10Xhap12_1642:HG2_PB_SVrefine2PBcRplusDovetail_5775:HG2_PB_assemblyticsfalcon_13813:HG2_PB_pbsv_2117:HG3_10X_allpass_397:HG3_Ill_GATKHCSBGrefine_1393:HG3_Ill_MetaSV_2719:HG3_Ill_SVrefine2DISCOVARDovetail_1477:HG3_Ill_manta_450:HG3_PB_SVrefine2Falcon1Dovetail_1320:HG3_PB_assemblyticsfalcon_13871:HG4_10X_allpass_366:HG4_Ill_GATKHCSBGrefine_1443:HG4_Ill_MetaSV_2672:HG4_Ill_manta_501:HG4_PB_SVrefine2Falcon1Dovetail_1267:HG4_PB_assemblyticsfalcon_13644:HG4_PB_pbsv_2135;NumExactMatchSVs=27;ClusterMaxShiftDist=0.00244499;ClusterMaxSizeDiff=0.00244499;ClusterMaxEditDist=0.00366748;PBcalls=13;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-817;DistBack=11561;DistForward=-91;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:106695078-106695895;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1974.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:0:12:0:13:1/1:0:11:0:11:1/1:0:36:./.:3:28:819:.:.
chr2	106930527	HG4_Ill_MetaSV_2674	TTTTATATATATATATATGTATGTATATATATATATATGTATGTATGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_2138:HG2_PB_HySA_3981:HG4_Ill_Krunchall_2958:HG2_Ill_Krunchall_2836:HG2_PB_pbsv_2119:HG2_PB_assemblyticsPBcR_13411:HG2_PB_SVrefine2PBcRplusDovetail_5777:HG4_PB_assemblyticsfalcon_13647:HG4_PB_SVrefine2Falcon1Dovetail_1268:HG4_Ill_scalpel_1914:HG4_Ill_manta_503:HG4_Ill_SVrefine2DISCOVARDovetail_1553:HG4_Ill_MetaSV_2674:HG4_Ill_GATKHC_3422:HG4_Ill_GATKHCSBGrefine_1445:HG4_CG_vcfBeta_1376:HG4_10X_allpass_369:HG2_Ill_scalpel_1983:HG2_Ill_SpiralSDKrefine_8729:HG2_Ill_MetaSV_2574:HG2_Ill_GATKHC_3418:HG2_Ill_GATKHCSBGrefine_1392:HG2_10X_SVrefine210Xhap12_1609:HG2_PB_SVrefine2PB10Xhap12_1644:HG4_Ill_Spiral_164:HG2_Ill_Spiral_129;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1609:HG2_Ill_GATKHCSBGrefine_1392:HG2_Ill_GATKHC_3418:HG2_Ill_MetaSV_2574:HG2_Ill_SpiralSDKrefine_8729:HG2_Ill_scalpel_1983:HG4_10X_allpass_369:HG4_CG_vcfBeta_1376:HG4_Ill_GATKHCSBGrefine_1445:HG4_Ill_GATKHC_3422:HG4_Ill_MetaSV_2674:HG4_Ill_SVrefine2DISCOVARDovetail_1553:HG4_Ill_manta_503:HG4_Ill_scalpel_1914:HG4_PB_SVrefine2Falcon1Dovetail_1268:HG4_PB_assemblyticsfalcon_13647;NumExactMatchSVs=16;ClusterMaxShiftDist=0.15544;ClusterMaxSizeDiff=0.15544;ClusterMaxEditDist=0.15544;PBcalls=8;Illcalls=15;TenXcalls=2;CGcalls=1;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=1;HG2count=13;HG3count=0;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-102;DistBack=39944;DistForward=-57;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:106930528-106930630;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1975.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:33:./.:20:8:8:22:./.:27:2:1:30:0/1:21:16:./.:.:.:.:.:.
chr2	106938458	HG2_Ill_GATKHCSBGrefine_1394	GCAGGAACTTAAGTTTTTTGTTTGTTTGTTTGTTTGTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCAGGGATTACAGGCGTGAGCCACCGTGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2575:HG2_10X_allpass_319:HG3_10X_allpass_398:HG3_Ill_Spiral_2238:HG4_PB_assemblyticsfalcon_13649:HG3_PB_assemblyticsfalcon_13875:HG3_Ill_GATKHCSBGrefine_1395:HG3_PB_pbsv_2108:HG3_PB_HySA_3229:HG3_Ill_scalpel_2104:HG2_Ill_tnscope_222:HG3_Ill_SVrefine2DISCOVARDovetail_1479:HG2_PB_pbsv_2120:HG2_PB_SVrefine2PB10Xhap12_1645:HG2_PB_SVrefine2Falcon2Bionano_828:HG2_Ill_GATKHCSBGrefine_1394:HG2_10X_SVrefine210Xhap12_1610:HG3_Ill_MetaSV_2720;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1610:HG2_Ill_GATKHCSBGrefine_1394:HG2_PB_SVrefine2Falcon2Bionano_828:HG2_PB_SVrefine2PB10Xhap12_1645:HG2_PB_pbsv_2120:HG3_Ill_SVrefine2DISCOVARDovetail_1479;NumExactMatchSVs=6;ClusterMaxShiftDist=0.116564;ClusterMaxSizeDiff=0.116564;ClusterMaxEditDist=0.116564;PBcalls=7;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=7832;DistForward=-329;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:106938459-106938803;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1976.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:45:57:0|1:36:7:7:43:1|0:0:25:28:0:0/1:41:7:0/1:38:5:.:.:.
chr2	109803452	HG4_PB_SVrefine2Falcon1Dovetail_1274	TCCCAGAGGCGGAGCTGGGCCTAGCCCTGGCACCCCACCCCATAGGTGCTGGCCCCACCTGTCACGGATCATTTAAGCATATTTTGCTAGCATCATGACCACACTCTTTGCTGGCTCCAGAGCCACAGGGTGAGGGACACAGGACTCTGTCCCCACGGTG	T	20	PASS	ClusterIDs=HG2_PB_pbsv_2126:HG2_PB_HySA_4000:HG4_PB_HySA_3199:HG2_Ill_MetaSV_2579:HG4_PB_pbsv_2147:HG4_PB_assemblyticsfalcon_13668:HG4_PB_SVrefine2PBcRDovetail_1135:HG4_PB_SVrefine2Falcon1Dovetail_1274:HG4_Ill_svaba_2640:HG4_Ill_scalpel_1929:HG4_Ill_manta_506:HG4_Ill_SVrefine2DISCOVARDovetail_1559:HG4_Ill_MetaSV_2677:HG4_Ill_GATKHCSBGrefine_1456:HG4_Ill_Cortex_1853:HG4_10X_allpass_372:HG3_PB_SVrefine2Falcon1Dovetail_1325:HG2_PB_assemblyticsfalcon_13838:HG2_PB_SVrefine2Falcon2Bionano_830:HG2_PB_SVrefine2Falcon1plusDovetail_6263:HG2_Ill_svaba_2599:HG2_Ill_scalpel_1997:HG2_Ill_manta_582:HG2_Ill_breakscan11_284:HG2_Ill_SpiralSDKrefine_8748:HG2_Ill_GATKHCSBGrefine_1397:HG2_Ill_Cortex_4411:HG2_10X_allpass_320:HG2_10X_SVrefine210Xhap12_1620:HG3_PB_assemblyticsfalcon_13897:HG4_Ill_Krunchall_2984:HG2_PB_assemblyticsPBcR_13430;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1620:HG2_10X_allpass_320:HG2_Ill_Cortex_4411:HG2_Ill_GATKHCSBGrefine_1397:HG2_Ill_SpiralSDKrefine_8748:HG2_Ill_breakscan11_284:HG2_Ill_manta_582:HG2_Ill_scalpel_1997:HG2_Ill_svaba_2599:HG2_PB_SVrefine2Falcon1plusDovetail_6263:HG2_PB_SVrefine2Falcon2Bionano_830:HG2_PB_assemblyticsfalcon_13838:HG3_PB_SVrefine2Falcon1Dovetail_1325:HG4_10X_allpass_372:HG4_Ill_Cortex_1853:HG4_Ill_GATKHCSBGrefine_1456:HG4_Ill_MetaSV_2677:HG4_Ill_SVrefine2DISCOVARDovetail_1559:HG4_Ill_manta_506:HG4_Ill_scalpel_1929:HG4_Ill_svaba_2640:HG4_PB_SVrefine2Falcon1Dovetail_1274:HG4_PB_SVrefine2PBcRDovetail_1135:HG4_PB_assemblyticsfalcon_13668:HG4_PB_pbsv_2147;NumExactMatchSVs=25;ClusterMaxShiftDist=0.150838;ClusterMaxSizeDiff=0.150838;ClusterMaxEditDist=0.202247;PBcalls=13;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-159;DistBack=16684;DistForward=-157;DistMin=-157;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:109803453-109803612;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1977.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:22:0|1:36:0:6:22:0|1:39:0:0:19:0/1:37:18:./.:.:.:.:.:.
chr2	110277882	HG2_PB_SVrefine2Falcon2Bionano_833	TAAGAATTATGATGTTGGCCAGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGACAGGCAGATCATGAGGTCAGGAGATCAAGACCACCCTGGCCAACATGGTGAAACCTGTCTCTACTAAAAATACAAAAATTAGCCGGGGGTGGTGGCACATGCCTGTAATCCCAGCTACTCAGAAGGTTGAGGCAGAAGAATCGCTGGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATGGTGCCACTGTACTCCAGCCTGTGGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1627:HG2_PB_HySA_4004:HG4_10X_allpass_373:HG4_PB_assemblyticsfalcon_13672:HG4_PB_SVrefine2Falcon1Dovetail_1277:HG3_PB_assemblyticsfalcon_13900:HG3_10X_allpass_399:HG3_PB_pbsv_2115:HG2_PB_pbsv_2129:HG3_PB_HySA_3250:HG4_PB_pbsv_2150:HG4_Ill_GATKHCSBGrefine_1459:HG3_Ill_scalpel_2123:HG3_Ill_GATKHCSBGrefine_1400:HG2_Ill_scalpel_2000:HG2_Ill_GATKHCSBGrefine_1399:HG2_10X_allpass_321:HG4_Ill_MetaSV_2678:HG3_Ill_MetaSV_2722:HG2_Ill_tnscope_223:HG2_Ill_MetaSV_2580:HG3_PB_SVrefine2PBcRDovetail_1094:HG3_PB_SVrefine2Falcon1Dovetail_1327:HG2_PB_SVrefine2PB10Xhap12_1651:HG2_PB_SVrefine2Falcon2Bionano_833:HG2_PB_SVrefine2Falcon1plusDovetail_6264:HG2_Ill_SVrefine2DISCOVARplusDovetail_6776;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1627:HG3_PB_SVrefine2PBcRDovetail_1094:HG3_PB_SVrefine2Falcon1Dovetail_1327:HG2_PB_SVrefine2PB10Xhap12_1651:HG2_PB_SVrefine2Falcon2Bionano_833:HG2_PB_SVrefine2Falcon1plusDovetail_6264:HG2_Ill_SVrefine2DISCOVARplusDovetail_6776;NumExactMatchSVs=7;ClusterMaxShiftDist=0.109955;ClusterMaxSizeDiff=0.109955;ClusterMaxEditDist=0.202346;PBcalls=13;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=199846;DistForward=-24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=316;REFWIDENED=2:110277883-110278524;PctSeqSimilarity=0.9066;PctSizeSimilarity=0.9674;PctRecOverlap=0.1627;SizeDiff=-11;StartDistance=-272;EndDistance=-283;GTMatch=0;TruScore=67;MatchId=1978.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:./.:0:0:0:0:0/0:29:0:23:0:0/0:39:0:./.:35:2:.:.:.
chr2	111576404	HG3_Ill_scalpel_2127	CTGATGTCAGCACCCTGGGAGCACACGGAAGCTCGTGATCAGCCAAAGCTGACCTGGCTGCGATGCTGAAGCTAGAATTGGCCTGTTGGGCAGGCACAAAGAGGACAGGCTGCATTCTGAGAAGTAATTTTCAGAACACTGGAGAGCATAGTTCTATTCAGCACCTAAGGTACTGTCCGTTTCTGGGCTTCATTTTAAAAGAGACACCCAGGCAAATGAAGCCAGTCTGGAGA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_2121:HG2_PB_HySA_4017:HG4_Ill_Krunchall_2989:HG2_Ill_Krunchall_2861:HG4_PB_HySA_3215:HG3_PB_HySA_3272:HG3_PB_assemblyticsfalcon_13905:HG4_PB_assemblyticsfalcon_13675:HG4_Ill_MetaSV_2679:HG4_PB_pbsv_2156:HG4_PB_SVrefine2PBcRDovetail_1140:HG4_PB_SVrefine2Falcon1Dovetail_1281:HG4_Ill_svaba_2645:HG4_Ill_scalpel_1937:HG4_Ill_SVrefine2DISCOVARDovetail_1561:HG4_Ill_GATKHCSBGrefine_1462:HG4_Ill_Cortex_1855:HG4_10X_allpass_374:HG3_PB_SVrefine2PBcRDovetail_1096:HG3_PB_SVrefine2Falcon1Dovetail_1329:HG3_Ill_svaba_2693:HG3_Ill_scalpel_2127:HG3_Ill_MetaSV_2723:HG3_Ill_GATKHCSBGrefine_1402:HG3_Ill_Cortex_1905:HG3_10X_allpass_400:HG2_PB_pbsv_2137:HG2_PB_SVrefine2PB10Xhap12_1653:HG2_Ill_svaba_2605:HG2_Ill_scalpel_2003:HG2_Ill_breakscan11_285:HG2_Ill_SpiralSDKrefine_8753:HG2_Ill_SVrefine2DISCOVARplusDovetail_6779:HG2_Ill_GATKHCSBGrefine_1401:HG2_Ill_Cortex_4413:HG2_10X_allpass_322:HG2_10X_SVrefine210Xhap12_1629;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1629:HG2_10X_allpass_322:HG2_Ill_Cortex_4413:HG2_Ill_GATKHCSBGrefine_1401:HG2_Ill_SVrefine2DISCOVARplusDovetail_6779:HG2_Ill_SpiralSDKrefine_8753:HG2_Ill_breakscan11_285:HG2_Ill_scalpel_2003:HG2_Ill_svaba_2605:HG2_PB_SVrefine2PB10Xhap12_1653:HG2_PB_pbsv_2137:HG3_10X_allpass_400:HG3_Ill_Cortex_1905:HG3_Ill_GATKHCSBGrefine_1402:HG3_Ill_MetaSV_2723:HG3_Ill_scalpel_2127:HG3_Ill_svaba_2693:HG3_PB_SVrefine2Falcon1Dovetail_1329:HG3_PB_SVrefine2PBcRDovetail_1096:HG4_10X_allpass_374:HG4_Ill_Cortex_1855:HG4_Ill_GATKHCSBGrefine_1462:HG4_Ill_SVrefine2DISCOVARDovetail_1561:HG4_Ill_scalpel_1937:HG4_Ill_svaba_2645:HG4_PB_SVrefine2Falcon1Dovetail_1281:HG4_PB_SVrefine2PBcRDovetail_1140:HG4_PB_pbsv_2156;NumExactMatchSVs=28;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.166667;PBcalls=13;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-232;DistBack=-325;DistForward=20911;DistMin=-325;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:111576409-111586393;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1979.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:./.:6:2:4:8:1|0:0:23:29:0:0/1:34:15:./.:.:.:.:.:.
chr2	111981772	HG2_PB_SVrefine2PBcRplusDovetail_5783	TACATTCGGGGGAAAGAGGATGAGTTCAGTTTTGCAGATGGAGTATTCTGGACATCCGGGAGATACATTCTGGGGAAAGAGGACGAGTTCAGTTTTGCAGATGGCGTATTCTGGACATCCGGGAGATACATTCGGGGGAAACAGGACGAGTTCAGTTTTGCAGATGGCGTATTCTGGACATCCGGGA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_834:HG2_PB_assemblyticsfalcon_13850:HG2_PB_assemblyticsfalcon_13851:HG2_PB_SVrefine2Falcon1plusDovetail_6267:HG4_PB_assemblyticsfalcon_13677:HG4_PB_SVrefine2Falcon1Dovetail_1282:HG2_Ill_SpiralSDKrefine_8755:HG2_PB_assemblyticsPBcR_13437:HG2_PB_SVrefine2PBcRplusDovetail_5783:HG2_PB_SVrefine2Falcon1plusDovetail_6266:HG4_PB_pbsv_2157:HG2_PB_pbsv_2138:HG2_PB_SVrefine2PB10Xhap12_1654;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6266:HG2_PB_SVrefine2PBcRplusDovetail_5783:HG2_PB_assemblyticsPBcR_13437:HG2_PB_assemblyticsfalcon_13850;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0321716;ClusterMaxSizeDiff=0.0265252;ClusterMaxEditDist=0.203753;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-186;DistBack=1;DistForward=-176;DistMin=-176;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1962;REFWIDENED=2:111980765-111982912;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1980.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:26:0|1:20:6:4:18:./.:0:0:0:0:./.:1:1:./.:.:.:.:.:.
chr2	113856565	HG2_PB_pbsv_2153	TGCCTCCGCTGTCACACAGGCTGCTGGGGTGTGGTTCCCAGGCCAATTGAGTTCTGTTCCCAGGTGGATTATGGC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5796:HG4_PB_assemblyticsfalcon_13695:HG2_PB_pbsv_2153:HG4_PB_pbsv_2173;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_2153;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0657895;ClusterMaxSizeDiff=0.0526316;ClusterMaxEditDist=0.192308;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-74;DistBack=-334;DistForward=31465;DistMin=-334;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=467;REFWIDENED=2:113856361-113856901;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9867;PctRecOverlap=0.8947;SizeDiff=-1;StartDistance=-7;EndDistance=-8;GTMatch=0;TruScore=95;MatchId=1982.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:33:0|1:30:2:3:31:./.:0:1:14:0:0/0:14:0:./.:.:.:.:.:.
chr2	114581702	HG2_Ill_Krunchall_2888	TATCTATCTGTCTGTCTGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATGTATCCTG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6795:HG3_PB_pbsv_2143:HG2_Ill_Krunchall_2889:HG4_PB_HySA_3274:HG3_PB_HySA_3313:HG2_PB_HySA_4070:HG4_Ill_svaba_2667:HG4_Ill_scalpel_1958:HG4_Ill_Krunchall_3015:HG4_Ill_GATKHC_3490:HG4_Ill_GATKHCSBGrefine_1476:HG4_Ill_250bpfermikitraw_2871:HG3_Ill_svaba_2714:HG3_Ill_scalpel_2153:HG3_Ill_manta_454:HG3_Ill_Krunchall_2916:HG3_Ill_GATKHC_3588:HG3_Ill_GATKHCSBGrefine_1411:HG3_Ill_250bpfermikitraw_2848:HG3_Ill_150bpfermikitraw_2749:HG2_PB_pbsv_2162:HG2_Ill_svaba_2620:HG2_Ill_manta_583:HG2_Ill_Krunchall_2888:HG2_Ill_GATKHC_3476:HG2_Ill_GATKHCSBGrefine_1410:HG2_Ill_250bpfermikitraw_2862:HG2_Ill_150bpfermikitraw_2631:HG4_PB_SVrefine2PBcRDovetail_1153:HG4_Ill_svaba_2666:HG4_Ill_manta_508:HG4_Ill_Krunchall_3014:HG4_Ill_GATKHC_3489:HG4_Ill_GATKHCSBGrefine_1475:HG4_Ill_250bpfermikitraw_2870:HG4_Ill_150bpfermikitraw_2774:HG2_PB_SVrefine2PBcRplusDovetail_5806:HG2_PB_SVrefine2PB10Xhap12_1668:HG2_PB_SVrefine2Falcon1plusDovetail_6286:HG2_Ill_svaba_2619:HG2_Ill_Krunchall_2887:HG2_Ill_GATKHC_3475:HG2_Ill_GATKHCSBGrefine_1409:HG2_Ill_250bpfermikitraw_2861:HG4_PB_pbsv_2185:HG4_PB_SVrefine2Falcon1Dovetail_1294:HG4_Ill_SVrefine2DISCOVARDovetail_1572:HG3_PB_SVrefine2PBcRDovetail_1111:HG3_PB_SVrefine2Falcon1Dovetail_1339:HG3_Ill_SVrefine2DISCOVARDovetail_1500;NumClusterSVs=50;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2631:HG2_Ill_250bpfermikitraw_2862:HG2_Ill_GATKHCSBGrefine_1410:HG2_Ill_GATKHC_3476:HG2_Ill_Krunchall_2888:HG2_Ill_manta_583:HG2_Ill_svaba_2620:HG2_PB_pbsv_2162:HG3_Ill_150bpfermikitraw_2749:HG3_Ill_250bpfermikitraw_2848:HG3_Ill_GATKHCSBGrefine_1411:HG3_Ill_GATKHC_3588:HG3_Ill_Krunchall_2916:HG3_Ill_manta_454:HG3_Ill_scalpel_2153:HG3_Ill_svaba_2714:HG4_Ill_250bpfermikitraw_2871:HG4_Ill_GATKHCSBGrefine_1476:HG4_Ill_GATKHC_3490:HG4_Ill_Krunchall_3015:HG4_Ill_scalpel_1958:HG4_Ill_svaba_2667;NumExactMatchSVs=22;ClusterMaxShiftDist=0.135338;ClusterMaxSizeDiff=0.135338;ClusterMaxEditDist=0.203125;PBcalls=13;Illcalls=37;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=18;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=2601;DistForward=-33;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=97;REFWIDENED=2:114581676-114581838;PctSeqSimilarity=0.971;PctSizeSimilarity=0.9429;PctRecOverlap=0.9437;SizeDiff=-4;StartDistance=4;EndDistance=0;GTMatch=0;TruScore=95;MatchId=1983.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:2:20:2:31:1/1:0:12:0:23:1/1:0:64:./.:.:.:.:.:.
chr2	115236436	HG4_PB_SVrefine2PBcRDovetail_1156	TAATAAAGCATGTACAGAATCTGTATGCTGAAAATGACAAAATGCTGATGAAAGAAATCAAATAAAATGTAAATGATAGAAATATATTCTTAATTTCTTAATA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6796:HG2_10X_SVrefine210Xhap12_1641:HG2_PB_pbsv_2165:HG4_PB_pbsv_2188:HG3_PB_pbsv_2147:HG3_PB_assemblyticsfalcon_13936:HG3_PB_SVrefine2PBcRDovetail_1114:HG3_PB_SVrefine2Falcon1Dovetail_1343:HG3_Ill_SVrefine2DISCOVARDovetail_1504:HG3_Ill_250bpfermikitraw_2855:HG3_Ill_150bpfermikitraw_2756:HG4_PB_SVrefine2PBcRDovetail_1156:HG4_PB_SVrefine2Falcon1Dovetail_1297:HG4_Ill_SVrefine2DISCOVARDovetail_1575:HG2_PB_SVrefine2PBcRplusDovetail_5808:HG2_PB_SVrefine2PB10Xhap12_1671:HG2_PB_SVrefine2Falcon2Bionano_847:HG2_PB_SVrefine2Falcon1plusDovetail_6289;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6796:HG4_PB_SVrefine2PBcRDovetail_1156:HG4_PB_SVrefine2Falcon1Dovetail_1297:HG4_Ill_SVrefine2DISCOVARDovetail_1575:HG2_PB_SVrefine2PBcRplusDovetail_5808:HG2_PB_SVrefine2PB10Xhap12_1671:HG2_PB_SVrefine2Falcon2Bionano_847:HG2_PB_SVrefine2Falcon1plusDovetail_6289;NumExactMatchSVs=8;ClusterMaxShiftDist=0.097561;ClusterMaxSizeDiff=0.097561;ClusterMaxEditDist=0.118227;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-102;DistBack=-292;DistForward=-1;DistMin=-292;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=190;REFWIDENED=2:115236437-115236728;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9612;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=1984.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:1/1:2:20:1:24:./.:5:0:4:1:0/1:12:13:./.:.:.:.:.:.
chr2	115628104	HG2_PB_pbsv_2167	CAAAAAGTAGTCAGGTAGAAAGGGGGAACTCTTGGCTGAAGGACACATATAAAAGGATGCAGAGACATTAAAAGGTGAAGATGTCACCCTAGAAGTGAGTGTTACAGAATCTCAAAAAAAATATTTTGATAATATCACAAAAGAGGATGAGTTTCTGTTTTTACTAAAAAAAATGATTCCAATGGTCAGGTAAGATAAGATTTACAAATAATGGAATATCTTTATTAACCCATGGAACTAATGCAAAGTTCATTTTTATTTTAGATAAAGTGCCTATTTTACATAGATTTCCTCTTAACAGAGAACGTCCATCGGGATCTTTTCATGAACAGATAGCTTAGCAAGCTTAGCTGGGCCTGTTGTAGAACTTGTTGATTAAATGACTGGGAATCCTAAAAGGGTTGGGGTAGTGTCTCCGCATGGTCAGAGGTGTCAGTGACATCTACCCTCTTTTTCTTTTCTTTTTTTTTTGTTACTTAATTTAAGCAGCATCCCTCTGCTTTTCTTTGTCTTTATTAATTGTCCTTTGAAAGATGGTAAATATATGGCTTCTCCAGTTGTGGTCTTTGGTGCTCCTTCAGAGAAGGCTGGTATTTACCCTCTAGCTTTCCCGATTTGAACTACGTCAAATAATGACCTTGCCCCACCCAGCTCTTTTTCTTTTTTGGAGAGGTTGTCACCATGAGCCCCTTTGGAAAAAAATCCATCTTTCTCTATTATTGGGGGAAAGAACACTGAAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1643:HG4_10X_allpass_378:HG4_PB_SVrefine2Falcon1Dovetail_1298:HG3_PB_assemblyticsfalcon_13939:HG3_PB_SVrefine2Falcon1Dovetail_1344:HG4_PB_assemblyticsfalcon_13710:HG2_PB_assemblyticsPBcR_13475:HG4_PB_pbsv_2190:HG2_Ill_tnscope_226:HG4_Ill_manta_510:HG4_Ill_MetaSV_2686:HG4_Ill_GATKHCSBGrefine_1481:HG2_PB_pbsv_2167:HG2_PB_SVrefine2PBcRplusDovetail_5809:HG2_PB_SVrefine2PB10Xhap12_1672:HG2_PB_SVrefine2Falcon2Bionano_848:HG2_PB_SVrefine2Falcon1plusDovetail_6290:HG2_Ill_manta_584:HG2_Ill_breakscan11_289:HG2_Ill_SpiralSDKrefine_8783:HG2_Ill_MetaSV_2587:HG2_Ill_GATKHCSBGrefine_1414:HG2_10X_allpass_325;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1643:HG4_Ill_manta_510:HG4_Ill_MetaSV_2686:HG4_Ill_GATKHCSBGrefine_1481:HG2_PB_pbsv_2167:HG2_PB_SVrefine2PBcRplusDovetail_5809:HG2_PB_SVrefine2PB10Xhap12_1672:HG2_PB_SVrefine2Falcon2Bionano_848:HG2_PB_SVrefine2Falcon1plusDovetail_6290:HG2_Ill_manta_584:HG2_Ill_breakscan11_289:HG2_Ill_SpiralSDKrefine_8783:HG2_Ill_MetaSV_2587:HG2_Ill_GATKHCSBGrefine_1414:HG2_10X_allpass_325;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0107962;ClusterMaxSizeDiff=0.0107962;ClusterMaxEditDist=0.0107962;PBcalls=11;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-739;DistBack=31928;DistForward=89766;DistMin=31928;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=2:115628105-115628846;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1985.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:48:./.:10:30:23:8:1|0:0:40:69:0:0/1:53:17:0/1:51:24:.:.:.
chr2	116183961	HG2_PB_assemblyticsPBcR_13477	ACTCCGACGCTGGAGATGACATTTCAACATGAGATTCTCACCAGGTGCCAC	A	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_13477:HG4_PB_assemblyticsfalcon_13715:HG2_PB_HySA_4090:HG3_PB_assemblyticsfalcon_13943;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsPBcR_13477;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0576923;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-50;DistBack=64;DistForward=12259;DistMin=64;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=649;REFWIDENED=2:116183597-116184295;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1986.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:14:55:1/1:5:23:3:18:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr2	117059339	HG2_PB_SVrefine2PBcRplusDovetail_5814	GTCTAAAAAGACATTTCTCAAAATAAGACATACAAATGGCCAATAGGTATATGAAAAAATGCTCAACATCATTAATCATCAGATGAATCCAAATCAAAACCACAATGAGATATTATCTCACCCTAGTGAATATGGCTTTTATTGAAAAGACAGGGAATAATAAATGCTGGTGAGGATGTGGAGGAAAGGAACTCTTGTACTCTCTTGGTGGGAGTGAAAATTAGTACAGTCACTATAGGAAACATTATTGAAGTGACTTTATTTTTTTGAGGTATGTTCCTTCTATACACAGTTTATTGAGGGTTTTTTATTGTAACTTTCAT	TTACA	20	PASS	ClusterIDs=HG2_PB_pbsv_2173:HG3_Ill_GATKHCSBGrefine_1418:HG2_Ill_GATKHCSBGrefine_1418:HG2_PB_HySA_4100:HG4_PB_SVrefine2Falcon1Dovetail_1304:HG3_PB_assemblyticsfalcon_13951:HG3_PB_SVrefine2PBcRDovetail_1119:HG3_PB_SVrefine2Falcon1Dovetail_1350:HG3_Ill_manta_456:HG3_Ill_SVrefine2DISCOVARDovetail_1513:HG2_PB_assemblyticsPBcR_13481:HG2_PB_SVrefine2PBcRplusDovetail_5814:HG2_PB_SVrefine2Falcon1plusDovetail_6297:HG2_Ill_manta_586:HG2_Ill_SVrefine2DISCOVARplusDovetail_6808:HG2_10X_SVrefine210Xhap12_1650:HG2_Ill_tnscope_227:HG2_Ill_SpiralSDKrefine_8788:HG3_10X_allpass_404:HG2_10X_allpass_326:HG4_PB_assemblyticsfalcon_13718:HG2_PB_assemblyticsfalcon_13895:HG3_Ill_Spiral_2287:HG2_Ill_Spiral_130:HG3_Ill_MetaSV_2730:HG2_Ill_MetaSV_2591:HG2_Ill_Krunchall_2905:HG3_PB_pbsv_2158;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1650:HG2_Ill_SVrefine2DISCOVARplusDovetail_6808:HG2_Ill_manta_586:HG2_PB_SVrefine2Falcon1plusDovetail_6297:HG2_PB_SVrefine2PBcRplusDovetail_5814:HG2_PB_assemblyticsPBcR_13481:HG3_Ill_SVrefine2DISCOVARDovetail_1513:HG3_Ill_manta_456:HG3_PB_SVrefine2Falcon1Dovetail_1350:HG3_PB_SVrefine2PBcRDovetail_1119:HG3_PB_assemblyticsfalcon_13951:HG4_PB_SVrefine2Falcon1Dovetail_1304;NumExactMatchSVs=12;ClusterMaxShiftDist=0.100162;ClusterMaxSizeDiff=0.100162;ClusterMaxEditDist=0.100162;PBcalls=12;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-323;DistForward=-320;DistMin=-323;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:117059339-117059661;PctSeqSimilarity=0.9821;PctSizeSimilarity=1;PctRecOverlap=0.9845;SizeDiff=0;StartDistance=1;EndDistance=5;GTMatch=0;TruScore=98;MatchId=1987.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:31:0|1:33:1:2:29:0|1:80:0:0:25:0/1:45:17:0/1:22:7:.:.:.
chr2	117239776	HG2_Ill_svaba_2636	TGCATAAGAATACCTTAGGCTATACATGTAGGGATACAAATCATTAAGACTGAAGAAGTATTCAGTACATG	T	20	PASS	ClusterIDs=HG3_Ill_Krunchall_2931:HG3_PB_pbsv_2160:HG3_PB_assemblyticsfalcon_13952:HG3_Ill_svaba_2732:HG3_Ill_manta_458:HG3_Ill_Krunchall_2932:HG3_Ill_GATKHC_3609:HG3_Ill_GATKHCSBGrefine_1421:HG3_Ill_250bpfermikitraw_2867:HG3_Ill_150bpfermikitraw_2769:HG3_CG_vcfBeta_1225:HG3_10X_allpass_405:HG2_PB_assemblyticsPBcR_13483:HG2_Ill_svaba_2636:HG2_Ill_manta_587:HG2_Ill_Krunchall_2908:HG2_Ill_GATKHC_3493:HG2_Ill_GATKHCSBGrefine_1421:HG2_Ill_250bpfermikitraw_2879:HG2_Ill_150bpfermikitraw_2648:HG2_CG_vcfBeta_1282:HG2_10X_allpass_327:HG2_PB_assemblyticsfalcon_13897:HG2_Ill_Spiral_131:HG2_PB_pbsv_2175:HG3_Ill_Cortex_1910:HG2_Ill_Cortex_4427;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_327:HG2_CG_vcfBeta_1282:HG2_Ill_150bpfermikitraw_2648:HG2_Ill_250bpfermikitraw_2879:HG2_Ill_GATKHCSBGrefine_1421:HG2_Ill_GATKHC_3493:HG2_Ill_Krunchall_2908:HG2_Ill_manta_587:HG2_Ill_svaba_2636:HG2_PB_assemblyticsPBcR_13483:HG3_10X_allpass_405:HG3_CG_vcfBeta_1225:HG3_Ill_150bpfermikitraw_2769:HG3_Ill_250bpfermikitraw_2867:HG3_Ill_GATKHCSBGrefine_1421:HG3_Ill_GATKHC_3609:HG3_Ill_Krunchall_2932:HG3_Ill_manta_458:HG3_Ill_svaba_2732:HG3_PB_assemblyticsfalcon_13952:HG3_PB_pbsv_2160;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0559441;ClusterMaxSizeDiff=0.0379747;ClusterMaxEditDist=0.153846;PBcalls=5;Illcalls=18;TenXcalls=2;CGcalls=2;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=2;HG2count=14;HG3count=13;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-70;DistBack=-39;DistForward=-67;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:117239775-117239848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1988.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:45:0|1:31:7:4:37:0|1:26:0:0:16:0/1:25:29:./.:.:.:.:.:.
chr2	117893050	HG3_Ill_SVrefine2DISCOVARDovetail_1520	TAAGAAATACATCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATAAAATAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1657:HG3_PB_HySA_3351:HG3_Ill_Krunchall_2937:HG2_Ill_Krunchall_2916:HG2_PB_assemblyticsfalcon_13916:HG2_PB_assemblyticsPBcR_13497:HG3_Ill_Spiral_2301:HG2_Ill_Spiral_132:HG3_PB_pbsv_2168:HG3_PB_HySA_3350:HG3_Ill_MetaSV_2731:HG2_Ill_tnscope_228:HG4_PB_SVrefine2Falcon1Dovetail_1307:HG3_PB_assemblyticsfalcon_13963:HG3_PB_SVrefine2PBcRDovetail_1121:HG3_PB_SVrefine2Falcon1Dovetail_1354:HG3_Ill_scalpel_2166:HG3_Ill_SVrefine2DISCOVARDovetail_1520:HG3_Ill_GATKHCSBGrefine_1431:HG3_10X_allpass_406:HG2_PB_pbsv_2182:HG2_PB_SVrefine2PBcRplusDovetail_5817:HG2_PB_SVrefine2Falcon1plusDovetail_6300:HG2_Ill_manta_590:HG2_Ill_MetaSV_2592:HG2_Ill_GATKHCSBGrefine_1430;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1657:HG4_PB_SVrefine2Falcon1Dovetail_1307:HG3_PB_assemblyticsfalcon_13963:HG3_PB_SVrefine2PBcRDovetail_1121:HG3_PB_SVrefine2Falcon1Dovetail_1354:HG3_Ill_scalpel_2166:HG3_Ill_SVrefine2DISCOVARDovetail_1520:HG3_Ill_GATKHCSBGrefine_1431:HG3_10X_allpass_406:HG2_PB_pbsv_2182:HG2_PB_SVrefine2PBcRplusDovetail_5817:HG2_PB_SVrefine2Falcon1plusDovetail_6300:HG2_Ill_manta_590:HG2_Ill_MetaSV_2592:HG2_Ill_GATKHCSBGrefine_1430;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0747384;ClusterMaxSizeDiff=0.0747384;ClusterMaxEditDist=0.0747384;PBcalls=12;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=13;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=57558;DistForward=4576;DistMin=4576;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:117893051-117893402;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1990.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:42:0|1:29:9:0:30:0|1:23:0:0:25:0/1:33:15:0/1:17:8:.:.:.
chr2	118790605	HG2_Ill_Krunchall_2925	GGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1664:HG2_PB_pbsv_2191:HG3_PB_HySA_3359:HG3_PB_pbsv_2176:HG3_Ill_svaba_2744:HG3_Ill_Krunchall_2945:HG3_Ill_GATKHC_3626:HG3_Ill_GATKHCSBGrefine_1437:HG3_Ill_250bpfermikitraw_2882:HG3_Ill_150bpfermikitraw_2782:HG2_Ill_manta_593:HG2_Ill_Krunchall_2925:HG2_Ill_GATKHC_3513:HG2_Ill_GATKHCSBGrefine_1438:HG2_Ill_250bpfermikitraw_2894:HG2_Ill_150bpfermikitraw_2664:HG3_PB_SVrefine2PBcRDovetail_1129:HG3_Ill_SVrefine2DISCOVARDovetail_1528:HG2_Ill_SVrefine2DISCOVARplusDovetail_6818;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2664:HG2_Ill_250bpfermikitraw_2894:HG2_Ill_GATKHCSBGrefine_1438:HG2_Ill_GATKHC_3513:HG2_Ill_Krunchall_2925:HG2_Ill_manta_593:HG3_Ill_150bpfermikitraw_2782:HG3_Ill_250bpfermikitraw_2882:HG3_Ill_GATKHCSBGrefine_1437:HG3_Ill_GATKHC_3626:HG3_Ill_Krunchall_2945:HG3_Ill_svaba_2744;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.125;PBcalls=4;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-56;DistBack=31433;DistForward=9334;DistMin=9334;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=142;REFWIDENED=2:118790567-118790764;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1991.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:22:./.:19:12:4:6:./.:28:1:2:11:0/1:23:28:./.:.:.:.:.:.
chr2	121873612	HG4_Ill_Krunchall_3084	CCAAGAGAAACCCACCCCCATGAGCCAATCACCTCCCACCAAGCCCCACTTTCAACATT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_2692:HG4_PB_assemblyticsfalcon_13771:HG2_PB_assemblyticsfalcon_13959:HG2_PB_pbsv_2219:HG4_PB_pbsv_2237:HG4_Ill_svaba_2730:HG4_Ill_scalpel_1999:HG4_Ill_manta_519:HG4_Ill_Krunchall_3084:HG4_Ill_GATKHCSBGrefine_1512:HG4_Ill_250bpfermikitraw_2937:HG4_Ill_150bpfermikitraw_2833:HG2_Ill_svaba_2681:HG2_Ill_manta_600:HG2_Ill_SpiralSDKrefine_8817:HG2_Ill_Krunchall_2954:HG2_Ill_GATKHCSBGrefine_1450:HG2_Ill_250bpfermikitraw_2929;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2692:HG4_Ill_svaba_2730:HG4_Ill_scalpel_1999:HG4_Ill_manta_519:HG4_Ill_Krunchall_3084:HG4_Ill_GATKHCSBGrefine_1512:HG4_Ill_250bpfermikitraw_2937:HG4_Ill_150bpfermikitraw_2833:HG2_Ill_svaba_2681:HG2_Ill_manta_600:HG2_Ill_SpiralSDKrefine_8817:HG2_Ill_Krunchall_2954:HG2_Ill_GATKHCSBGrefine_1450:HG2_Ill_250bpfermikitraw_2929;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0172414;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.0344828;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-58;DistBack=5155;DistForward=9294;DistMin=5155;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=56;REFWIDENED=2:121873613-121873726;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1994.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:25:0|1:27:2:0:20:0|1:33:1:0:21:0/1:24:17:./.:.:.:.:.:.
chr2	122141595	HG2_10X_SVrefine210Xhap12_1685	CACACACACACACATATATATGTATATATACACACATATATGTATATATACACACACACATATATATGTATATATACACACATATATATGTATATATATATACACACATATATATGTATATATATAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1685:HG2_PB_assemblyticsPBcR_13545:HG2_PB_SVrefine2PBcRplusDovetail_5842:HG2_PB_SVrefine2PB10Xhap12_1705:HG3_PB_HySA_3414:HG2_PB_assemblyticsfalcon_13965:HG2_PB_SVrefine2Falcon1plusDovetail_6325:HG2_PB_HySA_4189:HG4_PB_assemblyticsfalcon_13777:HG4_PB_SVrefine2Falcon1Dovetail_1332:HG3_PB_pbsv_2202:HG2_PB_pbsv_2222:HG3_Ill_svaba_2770:HG3_Ill_scalpel_2192:HG3_Ill_GATKHC_3656:HG3_Ill_GATKHCSBGrefine_1449:HG2_Ill_svaba_2684:HG2_Ill_manta_601:HG2_Ill_SpiralSDKrefine_8821:HG2_Ill_GATKHC_3548:HG2_Ill_GATKHCSBGrefine_1452;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1685:HG3_Ill_svaba_2770:HG3_Ill_scalpel_2192:HG3_Ill_GATKHC_3656:HG3_Ill_GATKHCSBGrefine_1449:HG2_Ill_svaba_2684:HG2_Ill_manta_601:HG2_Ill_SpiralSDKrefine_8821:HG2_Ill_GATKHC_3548:HG2_Ill_GATKHCSBGrefine_1452;NumExactMatchSVs=10;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.166667;PBcalls=11;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-126;DistBack=56347;DistForward=94460;DistMin=56347;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=35;REFWIDENED=2:122141596-122141756;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1995.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:28:./.:12:4:6:17:1|0:0:21:45:2:0/1:40:16:./.:.:.:.:.:.
chr2	122623755	HG2_CG_vcfBeta_1308	AGCATAAGCATTGTGTTTTCTCGACCAGAGAAATCTATGTTAAAGGCTTGCTTCT	A	20	PASS	ClusterIDs=HG2_PB_HySA_4191:HG4_PB_pbsv_2240:HG4_Ill_svaba_2735:HG4_Ill_scalpel_2003:HG4_Ill_manta_520:HG4_Ill_Krunchall_3091:HG4_Ill_GATKHC_3583:HG4_Ill_GATKHCSBGrefine_1514:HG4_Ill_Cortex_1869:HG4_Ill_250bpfermikitraw_2944:HG4_Ill_150bpfermikitraw_2841:HG4_CG_vcfBeta_1429:HG4_10X_allpass_383:HG3_PB_pbsv_2203:HG3_Ill_svaba_2771:HG3_Ill_scalpel_2193:HG3_Ill_manta_463:HG3_Ill_Krunchall_2977:HG3_Ill_GATKHC_3658:HG3_Ill_GATKHCSBGrefine_1450:HG3_Ill_Cortex_1919:HG3_Ill_250bpfermikitraw_2911:HG3_Ill_150bpfermikitraw_2806:HG3_CG_vcfBeta_1243:HG2_PB_pbsv_2223:HG2_PB_assemblyticsfalcon_13966:HG2_Ill_svaba_2686:HG2_Ill_scalpel_2064:HG2_Ill_manta_602:HG2_Ill_breakscan11_291:HG2_Ill_SpiralSDKrefine_8823:HG2_Ill_Krunchall_2959:HG2_Ill_GATKHC_3551:HG2_Ill_GATKHCSBGrefine_1453:HG2_Ill_Cortex_4445:HG2_Ill_250bpfermikitraw_2935:HG2_Ill_150bpfermikitraw_2700:HG2_CG_vcfBeta_1308:HG2_10X_allpass_329:HG3_PB_HySA_3415;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_329:HG2_CG_vcfBeta_1308:HG2_Ill_150bpfermikitraw_2700:HG2_Ill_250bpfermikitraw_2935:HG2_Ill_Cortex_4445:HG2_Ill_GATKHCSBGrefine_1453:HG2_Ill_GATKHC_3551:HG2_Ill_Krunchall_2959:HG2_Ill_SpiralSDKrefine_8823:HG2_Ill_breakscan11_291:HG2_Ill_manta_602:HG2_Ill_scalpel_2064:HG2_Ill_svaba_2686:HG2_PB_assemblyticsfalcon_13966:HG2_PB_pbsv_2223:HG3_CG_vcfBeta_1243:HG3_Ill_150bpfermikitraw_2806:HG3_Ill_250bpfermikitraw_2911:HG3_Ill_Cortex_1919:HG3_Ill_GATKHCSBGrefine_1450:HG3_Ill_GATKHC_3658:HG3_Ill_Krunchall_2977:HG3_Ill_manta_463:HG3_Ill_scalpel_2193:HG3_Ill_svaba_2771:HG3_PB_pbsv_2203:HG4_10X_allpass_383:HG4_CG_vcfBeta_1429:HG4_Ill_150bpfermikitraw_2841:HG4_Ill_250bpfermikitraw_2944:HG4_Ill_Cortex_1869:HG4_Ill_GATKHCSBGrefine_1514:HG4_Ill_GATKHC_3583:HG4_Ill_Krunchall_3091:HG4_Ill_manta_520:HG4_Ill_scalpel_2003:HG4_Ill_svaba_2735:HG4_PB_pbsv_2240;NumExactMatchSVs=38;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.018018;PBcalls=6;Illcalls=29;TenXcalls=2;CGcalls=3;PBexactcalls=4;Illexactcalls=29;TenXexactcalls=2;CGexactcalls=3;HG2count=16;HG3count=12;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-54;DistBack=12656;DistForward=26834;DistMin=12656;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:122623754-122623810;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1996.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:33:0|1:29:7:2:24:0|1:30:0:0:17:0/1:36:19:./.:.:.:.:.:.
chr2	123616911	HG2_PB_assemblyticsfalcon_13971	CATGTGTGTGAATGTGTGCGTGTGTGATGAATGTGTGTGACTGTGTGTGACTGTGTGTGAATATGTGTGTGA	C	20	PASS	ClusterIDs=HG2_PB_HySA_4198:HG3_PB_HySA_3423:HG4_PB_HySA_3358:HG3_PB_pbsv_2208:HG2_PB_pbsv_2229:HG4_PB_assemblyticsfalcon_13785:HG4_Ill_svaba_2741:HG4_Ill_scalpel_2010:HG4_Ill_Krunchall_3096:HG4_Ill_GATKHC_3587:HG4_Ill_GATKHCSBGrefine_1516:HG4_Ill_Cortex_1870:HG4_Ill_250bpfermikitraw_2947:HG3_PB_assemblyticsfalcon_14015:HG3_Ill_svaba_2779:HG3_Ill_scalpel_2198:HG3_Ill_manta_465:HG3_Ill_Krunchall_2982:HG3_Ill_GATKHC_3667:HG3_Ill_GATKHCSBGrefine_1456:HG3_Ill_Cortex_1922:HG3_Ill_250bpfermikitraw_2918:HG3_Ill_150bpfermikitraw_2813:HG2_PB_assemblyticsfalcon_13971:HG2_PB_assemblyticsPBcR_13551:HG2_Ill_svaba_2694:HG2_Ill_scalpel_2070:HG2_Ill_manta_604:HG2_Ill_Krunchall_2964:HG2_Ill_GATKHC_3555:HG2_Ill_GATKHCSBGrefine_1455:HG2_Ill_Cortex_4447:HG2_Ill_250bpfermikitraw_2939:HG4_PB_pbsv_2246;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2939:HG2_Ill_Cortex_4447:HG2_Ill_GATKHCSBGrefine_1455:HG2_Ill_GATKHC_3555:HG2_Ill_Krunchall_2964:HG2_Ill_manta_604:HG2_Ill_scalpel_2070:HG2_Ill_svaba_2694:HG2_PB_assemblyticsPBcR_13551:HG2_PB_assemblyticsfalcon_13971:HG3_Ill_150bpfermikitraw_2813:HG3_Ill_250bpfermikitraw_2918:HG3_Ill_Cortex_1922:HG3_Ill_GATKHCSBGrefine_1456:HG3_Ill_GATKHC_3667:HG3_Ill_Krunchall_2982:HG3_Ill_manta_465:HG3_Ill_scalpel_2198:HG3_Ill_svaba_2779:HG3_PB_assemblyticsfalcon_14015:HG4_Ill_250bpfermikitraw_2947:HG4_Ill_Cortex_1870:HG4_Ill_GATKHCSBGrefine_1516:HG4_Ill_GATKHC_3587:HG4_Ill_Krunchall_3096:HG4_Ill_scalpel_2010:HG4_Ill_svaba_2741:HG4_PB_assemblyticsfalcon_13785;NumExactMatchSVs=28;ClusterMaxShiftDist=0.147651;ClusterMaxSizeDiff=0.147651;ClusterMaxEditDist=0.174497;PBcalls=10;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-71;DistBack=904;DistForward=83889;DistMin=904;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=2:123616910-123616993;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1997.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:1/1:1:20:3:13:./.:2:36:0:43:1/1:0:28:./.:.:.:.:.:.
chr2	124170257	HG3_Ill_manta_469	GAGGAAGGAAAATAATATTGATAAAATCAGAAACCAACAAAATTTAAAATTGGGAAAAAATAGTGAAAATCAATGAAACAAAAAACTGACTTTGCTAAAAAAAAAAACAAAAAACAGAAATTAAATCAATGAAGCTGTAGCAAGAATGGTAATAAAAAACAAAGAAAACACAAATTATGAATATCAGAAATAAAAAAGGTGAAATCATAAGAGATTTAGTAGTCATTAAAAATAGAATGAGAATATTACATATAGCCTTATGCTCATATTTGACAACTTTAAAAAAAGAACCAGTATTTAAAAAAACCTGCCAAATTAAAGTACAATGAG	T	20	PASS	ClusterIDs=HG3_PB_pbsv_2216:HG4_Ill_GATKHCSBGrefine_1522:HG3_Ill_GATKHCSBGrefine_1461:HG2_Ill_GATKHCSBGrefine_1459:HG4_10X_allpass_385:HG3_10X_allpass_411:HG2_Ill_tnscope_230:HG4_PB_assemblyticsfalcon_13797:HG4_PB_SVrefine2PBcRDovetail_1187:HG4_PB_SVrefine2Falcon1Dovetail_1341:HG4_Ill_manta_525:HG3_PB_assemblyticsfalcon_14026:HG3_PB_SVrefine2PBcRDovetail_1153:HG3_PB_SVrefine2Falcon1Dovetail_1388:HG3_Ill_manta_469:HG3_Ill_SVrefine2DISCOVARDovetail_1553:HG2_PB_assemblyticsfalcon_13981:HG2_PB_SVrefine2PBcRplusDovetail_5847:HG2_PB_SVrefine2Falcon2Bionano_884:HG2_PB_SVrefine2Falcon1plusDovetail_6329:HG2_Ill_manta_606:HG2_10X_SVrefine210Xhap12_1694:HG2_Ill_SpiralSDKrefine_8838:HG4_Ill_Spiral_171:HG3_Ill_Spiral_2340:HG2_Ill_Spiral_134:HG2_PB_pbsv_2235:HG2_PB_assemblyticsPBcR_13562:HG4_Ill_MetaSV_2695:HG3_Ill_MetaSV_2738:HG2_Ill_MetaSV_2602:HG3_Ill_scalpel_2206:HG2_Ill_breakscan11_292:HG2_10X_allpass_330:HG2_Ill_Krunchall_2979:HG4_PB_HySA_3367:HG4_PB_pbsv_2253;NumClusterSVs=37;ExactMatchIDs=HG2_PB_assemblyticsPBcR_13562:HG2_10X_SVrefine210Xhap12_1694:HG2_Ill_manta_606:HG2_PB_SVrefine2Falcon1plusDovetail_6329:HG2_PB_SVrefine2Falcon2Bionano_884:HG2_PB_SVrefine2PBcRplusDovetail_5847:HG2_PB_assemblyticsfalcon_13981:HG3_Ill_SVrefine2DISCOVARDovetail_1553:HG3_Ill_manta_469:HG3_PB_SVrefine2Falcon1Dovetail_1388:HG3_PB_SVrefine2PBcRDovetail_1153:HG3_PB_assemblyticsfalcon_14026:HG4_Ill_manta_525:HG4_PB_SVrefine2Falcon1Dovetail_1341:HG4_PB_SVrefine2PBcRDovetail_1187:HG4_PB_assemblyticsfalcon_13797;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0550459;ClusterMaxSizeDiff=0.0550459;ClusterMaxEditDist=0.0550459;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-330;DistForward=1013;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:124170257-124170586;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=0.9939;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1999.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:0|1:23:2:2:24:1|0:0:20:54:0:0/1:63:19:0/1:25:9:.:.:.
chr2	124678639	HG4_Ill_250bpfermikitraw_2968	TTCTTAGTCTCCTCTCCACTGATTCATTCTGCCCCACTGAACTTAGTGAAC	T	20	PASS	ClusterIDs=HG2_PB_HySA_4212:HG4_PB_HySA_3372:HG2_Ill_Spiral_135:HG4_Ill_svaba_2752:HG4_Ill_scalpel_2023:HG4_Ill_Krunchall_3113:HG4_Ill_GATKHC_3607:HG4_Ill_GATKHCSBGrefine_1523:HG4_Ill_250bpfermikitraw_2968:HG4_Ill_150bpfermikitraw_2858:HG2_Ill_svaba_2710:HG2_Ill_SpiralSDKrefine_8845:HG2_Ill_Krunchall_2987:HG2_Ill_GATKHC_3579:HG2_Ill_GATKHCSBGrefine_1460:HG2_Ill_250bpfermikitraw_2958:HG2_Ill_150bpfermikitraw_2721:HG4_PB_pbsv_2257;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2721:HG2_Ill_250bpfermikitraw_2958:HG2_Ill_GATKHCSBGrefine_1460:HG2_Ill_GATKHC_3579:HG2_Ill_Krunchall_2987:HG2_Ill_SpiralSDKrefine_8845:HG2_Ill_svaba_2710:HG4_Ill_150bpfermikitraw_2858:HG4_Ill_250bpfermikitraw_2968:HG4_Ill_GATKHCSBGrefine_1523:HG4_Ill_GATKHC_3607:HG4_Ill_Krunchall_3113:HG4_Ill_scalpel_2023:HG4_Ill_svaba_2752;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0384615;PBcalls=3;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=18022;DistForward=332;DistMin=332;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=42;REFWIDENED=2:124678640-124678731;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2001.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:33:0|1:31:3:1:21:0|1:34:1:0:21:0/1:13:30:./.:.:.:.:.:.
chr2	125428159	HG2_PB_assemblyticsfalcon_13996	TCTTGTTGTTGTTGTTTGTACTTTTGATGTCAAAGCTAAAATCCACCTTAGAGGTGTTGCA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_136:HG2_PB_HySA_4223:HG2_PB_assemblyticsPBcR_13575:HG3_PB_assemblyticsfalcon_14035:HG3_PB_pbsv_2220:HG4_PB_pbsv_2261:HG2_PB_pbsv_2242:HG4_PB_assemblyticsfalcon_13811:HG4_Ill_svaba_2758:HG4_Ill_Krunchall_3119:HG4_Ill_GATKHCSBGrefine_1525:HG4_Ill_250bpfermikitraw_2975:HG3_PB_HySA_3442:HG3_Ill_svaba_2800:HG3_Ill_Krunchall_3003:HG3_Ill_GATKHCSBGrefine_1462:HG3_Ill_250bpfermikitraw_2945:HG2_PB_assemblyticsfalcon_13996:HG2_Ill_svaba_2715:HG2_Ill_manta_607:HG2_Ill_SpiralSDKrefine_8848:HG2_Ill_Krunchall_2994:HG2_Ill_GATKHCSBGrefine_1462:HG2_Ill_250bpfermikitraw_2965:HG2_Ill_150bpfermikitraw_2727:HG4_Ill_Spiral_174:HG3_Ill_Spiral_2352;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2727:HG2_Ill_250bpfermikitraw_2965:HG2_Ill_GATKHCSBGrefine_1462:HG2_Ill_Krunchall_2994:HG2_Ill_SpiralSDKrefine_8848:HG2_Ill_manta_607:HG2_Ill_svaba_2715:HG2_PB_assemblyticsfalcon_13996:HG3_Ill_250bpfermikitraw_2945:HG3_Ill_GATKHCSBGrefine_1462:HG3_Ill_Krunchall_3003:HG3_Ill_svaba_2800:HG3_PB_HySA_3442:HG4_Ill_250bpfermikitraw_2975:HG4_Ill_GATKHCSBGrefine_1525:HG4_Ill_Krunchall_3119:HG4_Ill_svaba_2758:HG4_PB_assemblyticsfalcon_13811;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0333333;PBcalls=9;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=8766;DistForward=27744;DistMin=8766;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=69;REFWIDENED=2:125428160-125428288;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2002.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:0:18:0:12:1/1:0:7:0:9:1/1:0:41:./.:.:.:.:.:.
chr2	126443247	HG3_PB_pbsv_2227	GTAACAAGGTACTCCTGACCCTCCCAGTTAGGGTGGTATCAGTGGCAGCCTGTGGAGAAACAGAAACTCTACCCCCACCCAGAAGTAATTATACCCACATCCTCATTCCCAGGTGTCATTAGAAGCTAAGTACGGAACCTGAACATCTACCCCCACCTTCAATACTGAGGCAGCATCCACACTTTCCTTGCTGGAGTAGTATTAGAAAAGCCATCTAAAAATTCAATTAAATGAGATCCAGAATTTTAAAACATTACATTCTGGATGTCCAGATTTCAGTTGAAAACCGCTCATCATGTCAAAAACTGGGGAAATCTCAATTTTAATGAAAAGGACAATTAACAGTTGCTGTATTTGTTTTCTATTTCTGCTGTAATAAATTATCACAAGCTTAGTGGCTTAGAACAACCTAATGTTATCTTACAGCTATCGATGGCAGAAGTCCAAAATTGGTTCACCTGGCTGACATCAAAGTGTTGACAGGGCTGCATTCCTTATGCATTCCTTGTGGAAGGAATCCCATTTCTGTCCTTTCTCCAGCTTCCAGTTGCCTGCATTCCTTGGCTTATGTTCTTCCATCTTTGAAGCCACCTAGGGCTCGTTGAGCCTTTCTCATGCTGCGTCACTCTGACACTCACTCCGCTTTTGCCTCCCTTTTCCACTTATAAGGACTGTGCTGATTCTACTGGCCTCACCCCAGTCACCCAGGAGAATCTCCCCATTTTATGATCTCCTGATTAAAAGACTTAATTCCATCTTATCCTTAATTCCCTTTGCCATGTAACAACATATGCACAGATTCTGGGGATTAGAATGTAGACATCTTTGTGAGGATACATTATTTTTCTACACTGAAGGCAACTTTACAAAATCTAAGTAGTCTTTTTAAGTTCTCAGAGTTATTTTTTGAGTCCCCAAATACCCTTGCTGAGATGATGATTAACTGGAAGTTTTATACCTCTAGTCTATCTCATTATTCAGAACAAGGAGCTTATCACATGTCCCTGCTGCATGGGCTTCTCTCCTCCATGATAAATTATCTTCCCTAAATATAAAGCTAAAAAGCAACAGATCACACAGTAATAGGTGCTCTCTTTTTCAAAACAAATATGCATATATGTGAGTACATCCATAAGAAGGGGAACCAACACTTTCATTCTGGGACTTCCCTTGTAGTTTAATACTCACCCAAAACAATTTGCCTAAATGCCAACAACTGTAAGTCAATACATCAGCTCTCCATCAGAAGCAAAAAATATTACTTTTTTTACTGAGTAGTTTCTAAAAGAGAAAAGGTCTCACACTGTAAATATGTAAAGCATCATGGGACATAAAAGGAGGTAAAGTTTCTACATTTCACTCAAACTGGTAAGATGTTGGCATCAATAAATTCTAAGATAATATATTTCACAATTACATATGTAGTGTGTATATTATATATATATATAAATGATACATAATATATACAGTTTGACTTGTGCAACATGAGTTTGAACTGTGCAGGCCCACTTAGTGCAGACTTTTTTCAATAAATATACTGGAAACATTTTTTGGAGAGTTGTGACAATTGAAAAAACTCACAGGCTGAGAAGCCTAGAAATATTAAAAAAAATTAAGAAAAAAGTATGTCATGAATGCACAAAATATATGTAAATACTAGTATATTTGATAATTTACTAGCATAAAGTATATACAAATCTATTATAAAAAGTCAAAATTTATCAAAACGTATGCACATCAACACAGACTGCACATGATGCCATTCACAGTCAAGAGAAATGTAAACCAATGTAAAGATGTAGTATTAAATCATAACTGCATACAATTCATGATAGTATGTGCTGTAGTGCTGTAGTAATTTCATAGTCATCTCCTCTTGCTATTGTGGCGAGCTCAAGTGTTACCCTTATCCCCTTAAAATGAGCAGTTCATCTCTCCAGTACATTGCATTTTGCAGTAAAAGGCGATCTCACAATTCTTGCATATTTTTCATCTCACCTATTGTAAACCTAGAATAACACCATGAAACCCATAGAAAGTGCTACTCTTGATGTTGGAAGTACTTCTAAAAAGCAGAGTAAAGAGCACTTTATAAAGCCTTTGCAGCAGCTATGCCAGAAGATGCAACAACCTTTCACTTTGTGTGAAATACCTTTTTATCTAGTATTACAAATGCAGCTTTCATGCTGGCAAAGGATTGCTATAAGAAAGACATACCTACAGCATCTAACATGATTCAAGAAATGGTAAAGTCATTATATTTCAACTTAAAGCAAAAAGGAGGTGACGAATTGAAAGCTGGAGAATTTAATGCCAGCAAAGGATGGTTTGACAATTTTAGGAAAATATTTGGCTTTAAAAATGTCAAGATAACAGGAAAAACAGCTTCTGCTGATCAAGAGGCAGCACACAAGTTCCCAGATGCCATTAAGAAAGTCACTGAGGAGAAAGGATGGAGTTTTTAATGCAGATGAAAGTGCTCTATTCTGGAAGAAAAAAAAAATGCCACAAAGGACATTTACTAGAAAGGGAAGTGAGCACCAGGATGCAATGCAGGAAAGGCCAGGCTCACTCTACTGTTTTGTATAAATGTAGTTTGGTTTACTGTGCTTATATCTGTAAAACTGCTAATCCTGAAGGAAAGATCTGACAGCAGATTCCTGTCTTTCGGTTGTACAACTAGAAGGCCCGGACAACAAAAGCCCCCATCTTTTGGATTGATTCCATTGATGTTTTGTCGCCAAGGTCCGGAAGTATTTTGCCAGTGAGGAACTGCCTTTTAAAGTTCTTTTGATATGCCCCTGACCACACAGAACCCCATGCGTTTAACACTAAAAATGTCAAAGTGATCTACTTGCCCCCAAACATATCTCTAATTCAGCTTCTAGATTAGGGCATCATAAGCACCTTTAAGACTCATTACACACTGTGGAAAGGATTGTCAACAATAAGAAAGAGAACCCCAATAGAGAGAACATCAGGAAAGTCCAGAAGGAATGCGCCATTGAAGATACCATCACTGTTATAGAAAATGTTGTGTTATCTGTAACACTGGACACAATAAATTCCCGCTTTAGAAAACTGTCCAGGTGTTGTGCATGACTTCACAGTTTTTACGGCAGGGCCAATCAAGAAAATCATGAAAGGAATTGTGGATATGGCAAAAAAAAAAAAAAAAAAAAAAAAATGGTGGAAGGAGAAAAATAAAGGGTTTCAAGATATGGATCAGATAAACTCAAGACATAATAGGGACACAACAGAAGATGACTAAATGGAAATGAATGCTTCTGAATCTGTGCCAGATGATGAGAAACAAGACAGAAGAAACAGTGCTAAAAAAGAAATTGACACTAGATAATCTTTCAGAAGGGTTCTGCTTATTTGGCTTTTGATTTCTTTTACAATATGAACCCTTCTATGACATGGGCACTGAAACTAAAGCAAGTGATAGAAGAAAGATTGGTATTGTAGGCCAGGCGTGGTGGCTCACTTCCCTAATCCCAGCACTTTGGGAGGCCGATGTGGGTGGATCACCAGGTCAGGAGATGGAGACCATCCTGGCTAGCATGGTGAAACCCTGTCTCTACTAAAAATAAAAAAAAATTAGCCTGGCGTGGTGGCACGTGCATGTAGTCCTAGCTAGTTGGGAGCCAGAGGCAGGAGAATCACTTTAACTCAGGAGGCGGAGGTTGCAGAGAGCCGAGATCGCGCCACTGCACTCCAGCCTGAGCAACAAAGCGAGATTCTGTCTCAAAAAAAAAAAAAAAAAAAAGACTGGTACTGAATGGAAACATTTTTAGGACAGTAAAATAGCAGAACATTCAGGCAGACATTATGGTGTATTTCCATAAAGTTACACTGAGTGTGCCTGTCTCTCCTGCCTCCCCTGCTACTTCTTTCACCACTACTTCTTTGGCCACCTCTGAGCCAAAAATGCCTTCCCCTCTTCTTCTTCCTCCTTCCCAGCCTACTCAATGTAAGGATGAAGACTTTTATGTTAATCTACTTCCACTTAATGAATATTAAATATATTTTCTCTTCCTTATGGTTTTTAAATAGCATTTTCTTTCCTCTAACTTACTTTATTGTAAAAGTACATTATATAATACATATAACAAATATGTGTTAATTGACTGTTTATGTTACAGTAAGGCTTCTGGTCAACAGTAAGCTATTCACAGTTAAGTTTCAGAGGAGTCAAAAAGTTATACGTGGATTTTGACTGCACAGGAGATTGGTGCCCCAAACCCCAATGCTGTTCAAAGTTCAACTGTATATGAATGTATATATATACACATACACACATTCTAAAGAAGCCACTAAAAGCTGATACAAAGAGACACACTAGAAAAATTAAAAATCTATAGATACATACAGTGGAATTCTAAAAACACATTCAAGTAACCTACAGGGAGAAAAAAGATAAAAGAAAGAAAGGAAAATGGAAAGAACAAATAGAAAACAAATAAAAATGGCAGACTTAAGAATTAATATATCAATAGTTACATTAAACGTAGTCTTAATACACCAAGTAAAAGAGAGTTATTGGCAGGACGGATTAAACACATGGCAATTCTAAATATTATTTTTATTTCTGTTTCCTTGTTTTGCAATCCTAAATTTGTACACACTAAAAAATATAACTATGTGTGAAATAAAATATGATGCAACTGAACAAAGACATAGACAAATTCACAATTACAATTGTTCAATTCTCCTTTCCCAATAATGGATCAATCAGAAAATCAGCACATATATATAAAAACACAATCCACCAACAAGAGCTATTTAACATTTATAGAATGCTCCAATTCAAAACTACAGAAAAACCTCTCTTTTCAAGCATTCACGTGACACAAATGAAGATAGACAATATTCTGGGCCTTAAAACAAACAAATTTAAAAACATTGAAATCATACACAGTGTGTTCTGTTATAACAAGGGAATCATCAAACTAGAAATCAATATGAAAAAAACAAATATTTGAAAACCAAATGACATTTAAAAAACATAATCCTTGGGTAAAAGAAGGCATATCAAGGGTAAGTAAAATGTACATTGAACAGGTTAAAAGATGAAAAAAAACCCATGAGATCAAAATCTGCATGACACAGTTAAAGCAGTGGAGAAAAGGAAATGTGTAACACTAAATGCTTATATCAGAAAATGGGAAAGATCTCATATAAATAACCTAAGCTCTCACATTGAAAACTTATTTTAAAAAAGAGAAAGGAAAAATAAGCCCCACAGAAAAAGGATGGAAATAATATGGTAAAGAAGAAAAATCAATAAAATTGAAAATGAAAAATAATGTAAAAAGTCCACTTAAAAAGCTGATTGTTAGAGAAGATTAATTAAATTGACAAACCGGTTGTAAGACTGACAAAGAACAAAAGAGAAAGGCACAAATTACCAATATCAGAAATAAAACAGGGACATCACTATAAATTCTACAGACATCAAAAGAAAATAAGGGATTAGGAATTAGTATAAACATATCTATACACATACATTTGACAACTTAGATAAATAGATCAATTCTTCAAAAAGCACAAACTACTACAACACACTCAATATAAAACAGATGTTTTGAATAGTCCTATAAGTAATATTTAATTTAATTTGTAATTTAAAAACTCCTACCCAAAAAATTCAGCCTCAGACAATGTTACTATTGAATTCTAACAAACATTTAAATAATTAATATTAACTCTACAGATTCTCTTCCAGAAAATTGAAGAGGATAAAAGAATTTTCAATTTATTTATGAAGCTTATATTACTTTTATATTCAAATGAAAAATACAAGGAGAAATAAAAGAGAAAAAATAAGGAAAATTTGAGACTAACATCCTCATAAGGCTGGAAGCAAACATTATTTAAAATATTAACAAATAGAATTAAGCAATTAGTAAAAAGAATTATACACCATTACCAAATGGGATTGGTTCTAAGAATGCATGCCTGGTTCAATATTTGAAAATGTAATCAACCATATTAACAACCTAAAGAAGAAAAAAGACATGATAGTATTAATTGATACACAAAAAGAGTTTCACATAATGCAGTACCTATTGATGATAACAACTCCCAGAAAAGTGGCAATAGAGTAGAAGTTTCTCAGCTTGATGAATAGTATCTAAAAAAATATATAATAATACAGCACTAATCTTATGCGTCATGGTTTAAGATGAAATACTTTTCTCATAATTTTGGAAACAAGGAAAGGATGTCTGCTCTCACGACTCTTACTTAACATACTACTAGAAGGTGTAACTATTACAAAAAGTTGAAAAGAAAAGAAAAGGCATAAAGGTAGAGAAAGAAGATGTACAACTCTTCCTAATTGCAGATGACACATAGAAAATTCCCAAATTAAAAACATATCCTCAAATGAAAAAGTAATTACAGTCAGGTATCAGTATGCAAGATAAACAAACAAAGTCAATTGTTATTATATATAATATACAAAATAGCACATGAACAGGGAAATTAAAAATACAGTTATAATTGATAAAAATTAAATACTTAGATAAAAATGTAATGAAAGATGTATAAGACCTATGTCCTAAAAACTGCAACACACTGATGAAATAAATCAAAAGATCAAAATAAATGGAGAAATCATTTTTTGCTTAGAATTGGACAACACAACAAAGCAAAGGTGGATGCCAATTCTCCTAAAACTGGTACAGGTTTAATGCAATTCTATTAAAATTGCAACAAGATATTTTGCAGATATAGACCAACTTATTTTAAAATTTATGTATAAAGACAAAGGAACTAAAATAGCTAGAATGATTTCGAAAATGAAAAATGCAATGGGAAGAATATTTATTGCATGGCTAGAGTAATTAAAAATATGTGCTATTGGCAAAAAGGTGTACAAATTGAACAGTTGAACATTATGAGGACCTAGAAATACACCCTTTCAAATTTGCCCAAGTGATTTTAGACAAAAGTACAAAAGCAATTTAATAACGGAAGTGGAGCCTTTTCAACAGGTGGTGCTGAAGTGATTCTGTAGACCAAGAAAATGAACTTCTGCCTAAACATCATACTTTGTACAAAAAGTAACAAGAAATGGATCATGGACTTAATTGTAGAATATAAAAGTGTATAACCTTTAGAGAAAAATAAAATAAAATGTTCAGGAATCTGAGCAAGGCAAATACTTTTTAGGCTTGACAACAAAAGTGGGAAAAAAGTTGATGCTTTGTGTTTTATCAAAATTAAAATTTTATCAATATTTTGCTGTGTGAAATGCTCTAAGAGAATGAAAAGCTACACATTTGGAAAAAATATTTGCCAATCACATATTTGCAAATCACATATCTAACTGAAAACCAGTATCTACAATTTATAAAACTCAACAGTAAAAACATCCTGATAGAAAATAGGCAAACTATTCAGCAAAGGGAATATGGATCGCAGAAAAACACATGAAATATGTTCAACATCATTAGCCATTAGAGAAATGTGACTTAAACCACAATGAAATACTTATAAGAATAAATGAAATAAAAATTAAATAAAGATATATGGTAGACATAAATAAAGGTATATATATATGTATATATACATATATAATACCAACGCTGGTGTGTATTCAGAGAAATGGAATAACTCGTGCACTTTTGTGGTAATGTAAAATGGTACAGCCACTTTAGAAAACAGCTTGGCATTTACAAAACAAACAAACAAACAAACTATGCAGCTACCTACATATCATACAACCCAGCAATTGTACTCTTGAGTATTTATCCCAGTATGGGGGGGTGGGTACTTATGATCTTACACACCAAAAACTTGTACACAAATATTCACAGTAGCTCTATTTATTGTAAGAGTCTAAAACTGGAAATGATCTATATATTCTTTTAACAAGTGAATGGTTAAATAAATTGTGATATATCCATGGTGTGGAATACTATGCAGAAATAAAAAGGAATGAGCTGTTGATAGTCAACAATGTGAATGAATCTCTAGAGAATTATACTAAATTTAAAAAGTTAATCCCCAAAACATGACAAACTGTCTAATTCAATTTATATAGCATTCTTAAAATGTCATACAAAAGGAAAATGACAAAATTATGAAAATGGAAAGCAGGTTATTTGCTGCCAAGCGTTAAGGAGAGGCTGGGTTGTGAAGGTGGTGCATGTGGCTGTAAATGGTCACCTTGAGGGATCGTGGGGTGATGGACTTCCTCTGTATCTTGACTGTATCCATGTTCATATCCTGGTTTTGTGGCAGTGGTAGTATAGGTTTGTAAATTGTTACTATTGGGGGAATTGGCTAATGGATACATGTGATCTGTTTGTATTATTTCTTACAAATACAGGCAAGTCTACAATTAAATACAAAATATTTTGCTTTAAAGAAAATTTCTACTCTCTAGGTTTGCCATCAGATTAAAATATTATGAAAGTAACTGATGCCTGATGCTTAGTAAGCACTCAGTTTATCTGATTTTCTTCCCTTTTCTCCTCTCCTACTCCTCCATAGATAACCTTGGCTTCTTGAAGACTGAATTTGTCCCACCAATGGGATATACCATGTCCTTCACAGCCTCTCAATTTTGA	G	20	PASS	ClusterIDs=HG4_10X_allpass_387:HG2_10X_allpass_331:HG3_10X_allpass_412:HG2_PB_assemblyticsPBcR_13583:HG2_PB_assemblyticsfalcon_14004:HG4_Ill_Krunchall_3125:HG3_Ill_Krunchall_3008:HG2_Ill_Krunchall_2998:HG2_Ill_breakscan11_293:HG4_PB_pbsv_2268:HG4_PB_assemblyticsfalcon_13820:HG4_PB_SVrefine2PBcRDovetail_1195:HG4_PB_SVrefine2Falcon1Dovetail_1348:HG4_Ill_MetaSV_2698:HG3_PB_pbsv_2227:HG3_PB_SVrefine2PBcRDovetail_1158:HG3_PB_SVrefine2Falcon1Dovetail_1395:HG3_Ill_SVrefine2DISCOVARDovetail_1566:HG3_Ill_MetaSV_2740:HG2_PB_pbsv_2248:HG2_PB_SVrefine2PBcRplusDovetail_5855:HG2_PB_SVrefine2PB10Xhap12_1718:HG2_PB_SVrefine2Falcon2Bionano_890:HG2_PB_SVrefine2Falcon1plusDovetail_6337:HG2_Ill_SpiralSDKrefine_8852:HG2_Ill_SVrefine2DISCOVARplusDovetail_6856:HG2_Ill_MetaSV_2603:HG2_10X_SVrefine210Xhap12_1700;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1700:HG2_Ill_MetaSV_2603:HG2_Ill_SVrefine2DISCOVARplusDovetail_6856:HG2_Ill_SpiralSDKrefine_8852:HG2_PB_SVrefine2Falcon1plusDovetail_6337:HG2_PB_SVrefine2Falcon2Bionano_890:HG2_PB_SVrefine2PB10Xhap12_1718:HG2_PB_SVrefine2PBcRplusDovetail_5855:HG2_PB_pbsv_2248:HG3_Ill_MetaSV_2740:HG3_Ill_SVrefine2DISCOVARDovetail_1566:HG3_PB_SVrefine2Falcon1Dovetail_1395:HG3_PB_SVrefine2PBcRDovetail_1158:HG3_PB_pbsv_2227:HG4_Ill_MetaSV_2698:HG4_PB_SVrefine2Falcon1Dovetail_1348:HG4_PB_SVrefine2PBcRDovetail_1195:HG4_PB_assemblyticsfalcon_13820:HG4_PB_pbsv_2268;NumExactMatchSVs=19;ClusterMaxShiftDist=0.000815708;ClusterMaxSizeDiff=0.000815708;ClusterMaxEditDist=0.000815708;PBcalls=14;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-8584;DistBack=34901;DistForward=34586;DistMin=34586;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=2:126443248-126451835;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2003.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:90:1/1:3:21:0:19:1/1:0:23:0:23:1/1:0:36:1/1:0:385:8554:.:.
chr2	127674756	HG2_PB_pbsv_2252	GTCATTTGCCCTGCGACTCAATAGACCTGAGCCAGACATCTACCAGCCATGACCTCTGCCAGCCTCATCACACACATTGGTTTTTCAGTCCCCTTAATTATCTCATCCTTCAGTGGAGGGAGCAGAGGTGGAGTCCATGCCGCCAAGAATGGAGCAATTTTGACCTGCAATTCCATACCCAGTCGAACTATCAATCAAATGTAAGGGGAATTGATGATGTTTTAAGGGAGAAAATCTCAAGAAGTTTTTCTCCCATATATCCTTTCTGGAAAAAAAATGCTTGAGGGAATACTGCAGAAAAATGTGCAGTTCATAGAACAGTAATTCATAATTTTCTTTAAAAAATGAACTAACCAAGAAAGCAAGGAAAACAAATCCCCAGTAACAGCTGTGCAGCAAGTATTCAAAACAGTCAATTCTACTCAGGCAGCTCAATTAAAAGTATGATTTAAAAGCCAGGTGATCACAGAGGTTTAAAGGGTCATATGCTTCCAATAAGGAAAATAAAAGTCTGAGGGCTTGGGTTTCAATGTTCCCACTGAGAAGAATAGACCTTGGGTTCCAAAGGTGAGAAGGTAGAACAGAGTCCCCTACTTAAAGCCAGCACACTTCGAGGGCTATACCTTCAATAAGATGGAAAAGGGCAGAAATGAGGGGAGACAGGAATCTACCCACTGACCCAAGAAGATAAAAATAAAGCTTTTCTCTCTTTGGTCTCTGTAGGCAGATGTTGGAGGAACTCTCTTATGAGGTACCAAAATCCCAGCCCTATGTCTCACACGAACTTGATGTTCAAATTTACGTCACTTGCCTGGCACAGGAACCACTTGACCTAAATTAACTTAAAAATGGTGCAGGATCAGAGATACCTAGGAGAAGAAAACACAAAGCACTCAACAGCGAGCACTTCCGTAAGCCAGTTTGCATGGGAGTCCCAGGGTGGGGCATGGAGCAAGAACGTCTGAAACTGAGGTCACAATCAGAAGTTCTCATCACCATGATCAAGAATTAGCACATGGGATAAACTTGCGTGCACTAGAACTTGAGATACTAGAAAGATCAGAAGTTCCAGTAAAATAATTGTATTTAAAAGGATTAATAGATAAAAGGACTATAATCACAAGAAGGAAAGGAAAGATTCGAATCCCTTAAAACTTCTAGAAATTGAATACATAGTCACTAAAATTAAAAATCCAGTGGCTGAATAAAATAGCATATTAGGCACAGCTCAAAAGAGAGCTGGTTAACCAGAAAATAGGGCTGAGGAAATTAGCCATAATGCAGCACAGAGAGATAACGAGAAGAAAAATATAAAAGAGAAGCTGGATCACAAAAGAAAAAAAGATCATATATATATATAAAAGATCATATATATATATAAATATATATATAAAATAGGAATTCCAGAAAAATACAACCTAGGCAATGGGGTTATATTTTGACACCATTTCTCTGAAACCAACTGGCCGTCCTACAATCTAATTCAATTCTAATACTAAAAACCTGGAGTTAGTGCAGTCCCCTCAGATTAAGGGCATAGTCCTTCGCAGGACGGCCCCCCCTTAATATGTCAGCCACAAGTTTCAGATGTCCTCAAGCCACCTGCACTTCTTTCTGGCTGGCTACAATTTCCAAAATGTTTCATTTCCACCACAACTGGGTGACTGCAATACATTCTAACACTAACCACCTGGAGGGAGCATCAGATCCTGCAAGTTAAAGGGCTCAGTCCTTCACAAGACTGACCTCACGTCAAGTCTCAGAGATCACTCACACTTCTGACTGACTGATAAAGCCAGAGGGTCCCACAGCCCCTCACATTTCGATCATTCATTAGAAAAACTAATAGAACTCACTGAAAGTCTTACAGTTAACAATTACAGTTTCCTTATCAAGGATACAGATCAGGGACACCCACATGGAGAGGCACATAGGGCAAGGTCACGGAGAGCGGTGCAGCACAGAGCTTTGATGCCCTCTTCTGCTGGAATCCAAGTGCATCACCCCCAGCACATCAATGCATTCACCAATCATGAAGTTCCACTGAGCCTCGGTATCCAGAGATTGTATTGGGCTTTCATTATGTAGGTATGATAGCTACCTACATAGATGTGTAATTGAGCTCAATCTCTAGTCCCACACCACTACCCAGAGGTCAGAGGTTGGGCTTGCCAAAATTTTCAATCCAGTAATCACATGACTGATCTTTCTACCGACCAGCCTCCACCCTGAAGCTATCTAGGGGCCCACTGTGAGTCGTCTAATTAGTATAACAAACAACTCCTATGACTCTGGAAATTCGAAGGGTTTTTGAAGCTCTCTGATGGGGCAAAGACTAGATATATTTTTTTATTATGCCACAGGAGAAAAATCCATGTGTAAAAAAATAATAATAATGACTGTATAATACCAGATACATCATGGTGAAAATGGAAGACACCAAAAACACAGAAAAAATTCTAAAACCACTATAAAGAAAAGACTAATTTACCTCCAAAGTATAACAATTAGCAAAAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1702:HG4_PB_pbsv_2271:HG3_10X_allpass_413:HG4_Ill_Krunchall_3138:HG2_Ill_Krunchall_3006:HG2_10X_allpass_332:HG4_PB_assemblyticsfalcon_13826:HG4_PB_SVrefine2Falcon1Dovetail_1351:HG3_PB_assemblyticsfalcon_14054:HG2_PB_assemblyticsPBcR_13591:HG2_PB_assemblyticsfalcon_14012:HG2_Ill_tnscope_231:HG4_PB_SVrefine2PBcRDovetail_1196:HG4_Ill_MetaSV_2699:HG3_PB_pbsv_2234:HG3_PB_SVrefine2PBcRDovetail_1160:HG3_PB_SVrefine2Falcon1Dovetail_1401:HG3_Ill_SVrefine2DISCOVARDovetail_1572:HG3_Ill_MetaSV_2742:HG3_Ill_GATKHCSBGrefine_1468:HG2_PB_pbsv_2252:HG2_PB_SVrefine2PBcRplusDovetail_5857:HG2_PB_SVrefine2Falcon2Bionano_893:HG2_PB_SVrefine2Falcon1plusDovetail_6339:HG2_Ill_SpiralSDKrefine_8864:HG2_Ill_SVrefine2DISCOVARplusDovetail_6858:HG2_Ill_MetaSV_2605:HG2_Ill_GATKHCSBGrefine_1466;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1702:HG4_PB_SVrefine2PBcRDovetail_1196:HG4_Ill_MetaSV_2699:HG3_PB_pbsv_2234:HG3_PB_SVrefine2PBcRDovetail_1160:HG3_PB_SVrefine2Falcon1Dovetail_1401:HG3_Ill_SVrefine2DISCOVARDovetail_1572:HG3_Ill_MetaSV_2742:HG3_Ill_GATKHCSBGrefine_1468:HG2_PB_pbsv_2252:HG2_PB_SVrefine2PBcRplusDovetail_5857:HG2_PB_SVrefine2Falcon2Bionano_893:HG2_PB_SVrefine2Falcon1plusDovetail_6339:HG2_Ill_SpiralSDKrefine_8864:HG2_Ill_SVrefine2DISCOVARplusDovetail_6858:HG2_Ill_MetaSV_2605:HG2_Ill_GATKHCSBGrefine_1466;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00198768;ClusterMaxSizeDiff=0.00198768;ClusterMaxEditDist=0.00238569;PBcalls=14;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2516;DistBack=46788;DistForward=-2515;DistMin=-2515;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:127674757-127677274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2004.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:91:./.:0:1:0:2:1/1:0:17:0:22:1/1:0:32:1/1:4:152:2552:.:.
chr2	128737073	HG4_10X_allpass_388	AAGATAGAGGAAACCTCGATAATAAAATGGCTTTTAAAGTCATATTAACTAATCACAATGTATGCATCTTATCAGAATACTCATTCAAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1706:HG4_PB_pbsv_2278:HG3_PB_pbsv_2241:HG2_PB_pbsv_2257:HG4_PB_HySA_3400:HG3_PB_assemblyticsfalcon_14062:HG3_CG_vcfBeta_1260:HG4_PB_assemblyticsfalcon_13832:HG4_PB_SVrefine2Falcon1Dovetail_1355:HG4_Ill_svaba_2784:HG4_Ill_scalpel_2044:HG4_Ill_manta_527:HG4_Ill_Krunchall_3148:HG4_Ill_GATKHC_3643:HG4_Ill_GATKHCSBGrefine_1534:HG4_Ill_Cortex_1881:HG4_Ill_250bpfermikitraw_3001:HG4_Ill_150bpfermikitraw_2884:HG4_CG_vcfBeta_1453:HG4_10X_allpass_388:HG3_PB_SVrefine2Falcon1Dovetail_1405:HG3_Ill_svaba_2825:HG3_Ill_scalpel_2229:HG3_Ill_manta_474:HG3_Ill_Krunchall_3021:HG3_Ill_GATKHC_3714:HG3_Ill_GATKHCSBGrefine_1471:HG3_Ill_Cortex_1933:HG3_Ill_250bpfermikitraw_2963:HG3_Ill_150bpfermikitraw_2848:HG3_10X_allpass_414:HG2_Ill_svaba_2740:HG2_Ill_scalpel_2102:HG2_Ill_manta_612:HG2_Ill_SpiralSDKrefine_8870:HG2_Ill_Krunchall_3015:HG2_Ill_GATKHC_3612:HG2_Ill_GATKHCSBGrefine_1470:HG2_Ill_Cortex_4469:HG2_Ill_250bpfermikitraw_2987:HG2_Ill_150bpfermikitraw_2754:HG2_10X_allpass_333:HG4_PB_SVrefine2PBcRDovetail_1199:HG4_Ill_SVrefine2DISCOVARDovetail_1643:HG3_PB_SVrefine2PBcRDovetail_1165:HG3_Ill_SVrefine2DISCOVARDovetail_1577:HG2_PB_SVrefine2PBcRplusDovetail_5861:HG2_PB_SVrefine2PB10Xhap12_1727:HG2_PB_SVrefine2Falcon2Bionano_899:HG2_PB_SVrefine2Falcon1plusDovetail_6343:HG2_Ill_breakscan11_295:HG2_Ill_SVrefine2DISCOVARplusDovetail_6861;NumClusterSVs=52;ExactMatchIDs=HG2_10X_allpass_333:HG2_Ill_150bpfermikitraw_2754:HG2_Ill_250bpfermikitraw_2987:HG2_Ill_Cortex_4469:HG2_Ill_GATKHCSBGrefine_1470:HG2_Ill_GATKHC_3612:HG2_Ill_Krunchall_3015:HG2_Ill_SpiralSDKrefine_8870:HG2_Ill_manta_612:HG2_Ill_scalpel_2102:HG2_Ill_svaba_2740:HG3_10X_allpass_414:HG3_Ill_150bpfermikitraw_2848:HG3_Ill_250bpfermikitraw_2963:HG3_Ill_Cortex_1933:HG3_Ill_GATKHCSBGrefine_1471:HG3_Ill_GATKHC_3714:HG3_Ill_Krunchall_3021:HG3_Ill_manta_474:HG3_Ill_scalpel_2229:HG3_Ill_svaba_2825:HG3_PB_SVrefine2Falcon1Dovetail_1405:HG4_10X_allpass_388:HG4_CG_vcfBeta_1453:HG4_Ill_150bpfermikitraw_2884:HG4_Ill_250bpfermikitraw_3001:HG4_Ill_Cortex_1881:HG4_Ill_GATKHCSBGrefine_1534:HG4_Ill_GATKHC_3643:HG4_Ill_Krunchall_3148:HG4_Ill_manta_527:HG4_Ill_scalpel_2044:HG4_Ill_svaba_2784:HG4_PB_SVrefine2Falcon1Dovetail_1355:HG4_PB_assemblyticsfalcon_13832;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0558659;ClusterMaxSizeDiff=0.0558659;ClusterMaxEditDist=0.0558659;PBcalls=14;Illcalls=32;TenXcalls=4;CGcalls=2;PBexactcalls=3;Illexactcalls=28;TenXexactcalls=3;CGexactcalls=1;HG2count=19;HG3count=16;HG4count=17;NumTechs=4;NumTechsExact=4;SVLEN=-89;DistBack=31733;DistForward=-84;DistMin=-84;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=2:128737070-128737167;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2005.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:2:11:1:25:1/1:0:12:0:20:1/1:0:46:./.:.:.:.:.:.
chr2	128871259	HG3_Ill_manta_475	TAAGACTCTGTGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACGCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_296:HG3_PB_assemblyticsfalcon_14066:HG4_Ill_Krunchall_3149:HG2_Ill_Krunchall_3016:HG3_PB_pbsv_2244:HG4_PB_pbsv_2281:HG2_PB_pbsv_2260:HG3_PB_HySA_3459:HG4_PB_HySA_3404:HG4_Ill_MetaSV_2703:HG2_PB_HySA_4253:HG2_Ill_tnscope_232:HG2_Ill_MetaSV_2610:HG4_PB_SVrefine2PBcRDovetail_1202:HG4_PB_SVrefine2Falcon1Dovetail_1359:HG4_Ill_svaba_2785:HG4_Ill_scalpel_2046:HG4_Ill_manta_528:HG4_Ill_SVrefine2DISCOVARDovetail_1645:HG4_Ill_GATKHCSBGrefine_1536:HG4_10X_allpass_389:HG3_PB_SVrefine2PBcRDovetail_1168:HG3_PB_SVrefine2Falcon1Dovetail_1408:HG3_Ill_svaba_2826:HG3_Ill_manta_475:HG3_Ill_GATKHCSBGrefine_1473:HG3_10X_allpass_415:HG2_PB_SVrefine2PBcRplusDovetail_5865:HG2_PB_SVrefine2PB10Xhap12_1731:HG2_PB_SVrefine2Falcon2Bionano_903:HG2_PB_SVrefine2Falcon1plusDovetail_6347:HG2_Ill_svaba_2741:HG2_Ill_scalpel_2104:HG2_Ill_manta_613:HG2_Ill_SVrefine2DISCOVARplusDovetail_6865:HG2_Ill_GATKHCSBGrefine_1472:HG2_10X_SVrefine210Xhap12_1710;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1710:HG2_Ill_GATKHCSBGrefine_1472:HG2_Ill_SVrefine2DISCOVARplusDovetail_6865:HG2_Ill_manta_613:HG2_Ill_scalpel_2104:HG2_Ill_svaba_2741:HG2_PB_SVrefine2Falcon1plusDovetail_6347:HG2_PB_SVrefine2Falcon2Bionano_903:HG2_PB_SVrefine2PB10Xhap12_1731:HG2_PB_SVrefine2PBcRplusDovetail_5865:HG3_10X_allpass_415:HG3_Ill_GATKHCSBGrefine_1473:HG3_Ill_manta_475:HG3_Ill_svaba_2826:HG3_PB_SVrefine2Falcon1Dovetail_1408:HG3_PB_SVrefine2PBcRDovetail_1168:HG4_10X_allpass_389:HG4_Ill_GATKHCSBGrefine_1536:HG4_Ill_SVrefine2DISCOVARDovetail_1645:HG4_Ill_manta_528:HG4_Ill_scalpel_2046:HG4_Ill_svaba_2785:HG4_PB_SVrefine2Falcon1Dovetail_1359:HG4_PB_SVrefine2PBcRDovetail_1202;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0819672;ClusterMaxEditDist=0.0819672;PBcalls=15;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-862;DistForward=-297;DistMin=-862;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:128871260-128871582;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2006.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:1:19:0:20:1/1:0:10:0:18:1/1:0:40:./.:1:16:.:.:.
chr2	129429395	HG3_Ill_GATKHCSBGrefine_1478	ATTGGTGTATTTACAATCCCTGAACTAGACATAAAGGTTCTCCAAGGCCCCACCAGAGTAGCTAGATACAGAGTGTCCATTGGTGCATTCACAAACCCTGAGGTAGACACAGGGTGCTGATTGGTGTGTTTACAAACCGTGAGCTAGATACAGAGTGCTG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_2249:HG2_PB_assemblyticsPBcR_13611:HG2_PB_SVrefine2PBcRplusDovetail_5868:HG3_Ill_GATKHC_3725:HG3_Ill_GATKHCSBGrefine_1478:HG2_Ill_GATKHCSBGrefine_1475:HG3_PB_SVrefine2PBcRDovetail_1170:HG3_Ill_SVrefine2DISCOVARDovetail_1582:HG2_Ill_MetaSV_2613:HG3_Ill_svaba_2830:HG2_Ill_svaba_2745:HG2_10X_allpass_335:HG2_PB_pbsv_2265;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1475:HG3_Ill_GATKHCSBGrefine_1478:HG3_Ill_GATKHC_3725;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0185759;ClusterMaxSizeDiff=0.0185759;ClusterMaxEditDist=0.0247678;PBcalls=5;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-159;DistBack=1368;DistForward=-133;DistMin=-133;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=191;REFWIDENED=2:129429262-129429611;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2008.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:21:0|1:15:0:2:18:./.:2:0:28:0:0/1:35:17:./.:.:.:.:.:.
chr2	130172940	HG4_PB_SVrefine2PBcRDovetail_1208	TAAGAATGTTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_10X_allpass_417:HG3_PB_assemblyticsfalcon_14080:HG4_PB_assemblyticsfalcon_13848:HG2_PB_assemblyticsfalcon_14039:HG2_PB_assemblyticsPBcR_13618:HG2_PB_pbsv_2271:HG3_PB_pbsv_2254:HG2_10X_allpass_336:HG4_PB_pbsv_2292:HG4_PB_SVrefine2PBcRDovetail_1208:HG4_PB_SVrefine2Falcon1Dovetail_1364:HG3_PB_SVrefine2PBcRDovetail_1173:HG3_PB_SVrefine2Falcon1Dovetail_1414:HG2_PB_SVrefine2PBcRplusDovetail_5872:HG2_PB_SVrefine2PB10Xhap12_1738:HG2_PB_SVrefine2Falcon2Bionano_909:HG2_PB_SVrefine2Falcon1plusDovetail_6355;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6355:HG2_PB_SVrefine2Falcon2Bionano_909:HG2_PB_SVrefine2PB10Xhap12_1738:HG2_PB_SVrefine2PBcRplusDovetail_5872:HG3_PB_SVrefine2Falcon1Dovetail_1414:HG3_PB_SVrefine2PBcRDovetail_1173:HG4_PB_SVrefine2Falcon1Dovetail_1364:HG4_PB_SVrefine2PBcRDovetail_1208:HG4_PB_pbsv_2292;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0949367;ClusterMaxSizeDiff=0.0949367;ClusterMaxEditDist=0.0949367;PBcalls=15;Illcalls=0;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-315;DistBack=-2034;DistForward=160375;DistMin=-2034;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=2:130172941-130173266;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2009.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:31:1/1:0:16:0:12:./.:0:2:0:0:./.:0:0:./.:2:10:.:.:.
chr2	130493077	HG2_Ill_250bpfermikitraw_2999	ATGGTGGTGGTAGTGATGGTGGTGGTGGTGGTAGTGATGGTGGTGGTGATAG	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_2999:HG4_PB_HySA_3423:HG3_PB_assemblyticsfalcon_14085:HG2_PB_HySA_4274:HG4_PB_HySA_3422:HG2_PB_pbsv_2274:HG3_PB_pbsv_2256:HG4_PB_pbsv_2294:HG3_PB_HySA_3471:HG2_PB_HySA_4273:HG4_PB_assemblyticsfalcon_13852:HG4_Ill_svaba_2801:HG4_Ill_Krunchall_3164:HG4_Ill_GATKHC_3670:HG4_Ill_GATKHCSBGrefine_1542:HG4_Ill_250bpfermikitraw_3017:HG3_Ill_svaba_2837:HG3_Ill_Krunchall_3030:HG3_Ill_GATKHC_3734:HG3_Ill_GATKHCSBGrefine_1483:HG3_Ill_250bpfermikitraw_2971:HG3_Ill_150bpfermikitraw_2858:HG2_PB_assemblyticsfalcon_14044:HG2_PB_assemblyticsPBcR_13622:HG2_Ill_svaba_2758:HG2_Ill_Krunchall_3029:HG2_Ill_GATKHC_3633:HG2_Ill_GATKHCSBGrefine_1481;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_2999:HG4_PB_assemblyticsfalcon_13852:HG4_Ill_svaba_2801:HG4_Ill_Krunchall_3164:HG4_Ill_GATKHC_3670:HG4_Ill_GATKHCSBGrefine_1542:HG4_Ill_250bpfermikitraw_3017:HG3_Ill_svaba_2837:HG3_Ill_Krunchall_3030:HG3_Ill_GATKHC_3734:HG3_Ill_GATKHCSBGrefine_1483:HG3_Ill_250bpfermikitraw_2971:HG3_Ill_150bpfermikitraw_2858:HG2_PB_assemblyticsfalcon_14044:HG2_PB_assemblyticsPBcR_13622:HG2_Ill_svaba_2758:HG2_Ill_Krunchall_3029:HG2_Ill_GATKHC_3633:HG2_Ill_GATKHCSBGrefine_1481;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0943396;PBcalls=12;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=24601;DistForward=159314;DistMin=24601;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=29;REFWIDENED=2:130493076-130493158;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2010.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:27:1/1:2:13:0:8:./.:113:196:95:182:1/1:0:8:./.:.:.:.:.:.
chr2	134460264	HG4_Ill_scalpel_2068	ACTCGTCTCTTTTTCTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_2313:HG4_Ill_GATKHCSBGrefine_1559:HG4_Ill_Krunchall_3179:HG2_PB_HySA_4324:HG4_Ill_Krunchall_3178:HG3_Ill_Krunchall_3052:HG2_Ill_Krunchall_3039:HG4_PB_assemblyticsfalcon_13870:HG3_PB_assemblyticsfalcon_14096:HG2_PB_assemblyticsPBcR_13645:HG3_PB_pbsv_2280:HG4_PB_HySA_3452:HG4_Ill_Spiral_177:HG3_PB_HySA_3510:HG4_Ill_MetaSV_2720:HG3_Ill_MetaSV_2766:HG2_Ill_tnscope_236:HG2_Ill_MetaSV_2626:HG4_PB_SVrefine2PBcRDovetail_1214:HG4_Ill_scalpel_2068:HG4_Ill_manta_534:HG4_Ill_SVrefine2DISCOVARDovetail_1668:HG4_Ill_GATKHCSBGrefine_1557:HG4_10X_allpass_394:HG3_PB_SVrefine2PBcRDovetail_1180:HG3_PB_SVrefine2Falcon1Dovetail_1420:HG3_Ill_scalpel_2251:HG3_Ill_manta_482:HG3_Ill_SVrefine2DISCOVARDovetail_1605:HG3_Ill_GATKHCSBGrefine_1502:HG3_10X_allpass_422:HG2_PB_pbsv_2298:HG2_PB_assemblyticsfalcon_14062:HG2_PB_SVrefine2PBcRplusDovetail_5892:HG2_PB_SVrefine2PB10Xhap12_1761:HG2_PB_SVrefine2Falcon2Bionano_914:HG2_PB_SVrefine2Falcon1plusDovetail_6364:HG2_Ill_scalpel_2121:HG2_Ill_manta_619:HG2_Ill_SpiralSDKrefine_8911:HG2_Ill_SVrefine2DISCOVARplusDovetail_6890:HG2_Ill_GATKHCSBGrefine_1495:HG2_10X_allpass_338:HG2_10X_SVrefine210Xhap12_1732:HG2_Ill_breakscan11_301;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1732:HG2_10X_allpass_338:HG2_Ill_GATKHCSBGrefine_1495:HG2_Ill_SVrefine2DISCOVARplusDovetail_6890:HG2_Ill_SpiralSDKrefine_8911:HG2_Ill_manta_619:HG2_Ill_scalpel_2121:HG2_PB_SVrefine2Falcon1plusDovetail_6364:HG2_PB_SVrefine2Falcon2Bionano_914:HG2_PB_SVrefine2PB10Xhap12_1761:HG2_PB_SVrefine2PBcRplusDovetail_5892:HG2_PB_assemblyticsfalcon_14062:HG2_PB_pbsv_2298:HG3_10X_allpass_422:HG3_Ill_GATKHCSBGrefine_1502:HG3_Ill_SVrefine2DISCOVARDovetail_1605:HG3_Ill_manta_482:HG3_Ill_scalpel_2251:HG3_PB_SVrefine2Falcon1Dovetail_1420:HG3_PB_SVrefine2PBcRDovetail_1180:HG4_10X_allpass_394:HG4_Ill_GATKHCSBGrefine_1557:HG4_Ill_SVrefine2DISCOVARDovetail_1668:HG4_Ill_manta_534:HG4_Ill_scalpel_2068:HG4_PB_SVrefine2PBcRDovetail_1214;NumExactMatchSVs=26;ClusterMaxShiftDist=0.108911;ClusterMaxSizeDiff=0.108911;ClusterMaxEditDist=0.108911;PBcalls=17;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=54979;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:134460265-134460586;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2011.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:91:1/1:0:13:2:13:1/1:0:29:0:23:1/1:0:31:./.:2:6:.:.:.
chr2	134966700	HG2_PB_SVrefine2PBcRplusDovetail_5893	TAGAACTGGCTTATTTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTTTTATTTTTTAATTATTATTATTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCACTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGTGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCGGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTGGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTACCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTAATGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1735:HG2_10X_allpass_339:HG3_10X_allpass_423:HG2_PB_assemblyticsfalcon_14066:HG2_PB_assemblyticsPBcR_13650:HG3_PB_assemblyticsfalcon_14099:HG3_PB_pbsv_2285:HG3_Ill_Krunchall_3059:HG2_Ill_Krunchall_3044:HG2_Ill_tnscope_237:HG3_PB_SVrefine2PBcRDovetail_1182:HG3_PB_SVrefine2Falcon1Dovetail_1421:HG3_Ill_SVrefine2DISCOVARDovetail_1610:HG3_Ill_MetaSV_2767:HG3_Ill_GATKHCSBGrefine_1505:HG2_PB_pbsv_2300:HG2_PB_SVrefine2PBcRplusDovetail_5893:HG2_PB_SVrefine2PB10Xhap12_1763:HG2_PB_SVrefine2Falcon2Bionano_915:HG2_PB_SVrefine2Falcon1plusDovetail_6365:HG2_Ill_breakscan11_304:HG2_Ill_MetaSV_2627:HG2_Ill_GATKHCSBGrefine_1497;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1735:HG3_PB_SVrefine2PBcRDovetail_1182:HG3_PB_SVrefine2Falcon1Dovetail_1421:HG3_Ill_SVrefine2DISCOVARDovetail_1610:HG3_Ill_MetaSV_2767:HG3_Ill_GATKHCSBGrefine_1505:HG2_PB_pbsv_2300:HG2_PB_SVrefine2PBcRplusDovetail_5893:HG2_PB_SVrefine2PB10Xhap12_1763:HG2_PB_SVrefine2Falcon2Bionano_915:HG2_PB_SVrefine2Falcon1plusDovetail_6365:HG2_Ill_breakscan11_304:HG2_Ill_MetaSV_2627:HG2_Ill_GATKHCSBGrefine_1497;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00964067;ClusterMaxSizeDiff=0.00964067;ClusterMaxEditDist=0.00964067;PBcalls=11;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-3430;DistBack=19536;DistForward=-3430;DistMin=-3430;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=2:134966701-134970147;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2012.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:53:0|1:20:3:1:28:1|0:0:42:51:0:0/1:31:19:0/1:251:140:3504:.:.
chr2	135790819	HG2_PB_SVrefine2Falcon2Bionano_919	CCCCCACCTCCCTCCCAGACAGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACCTCCCAGTAGGAGCGGCTGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCAGCTGGCCGGGTGGGGGGCTGACCCCCCCCACTGCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGATCCTCACTTCCCAGTAGGGGCGGTCGGGCAGAGGCG	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1183:HG2_PB_SVrefine2Falcon1plusDovetail_6368:HG2_PB_SVrefine2PB10Xhap12_1766:HG3_PB_pbsv_2287:HG2_PB_pbsv_2303:HG2_Ill_SpiralSDKrefine_8918:HG2_PB_SVrefine2PBcRplusDovetail_5897:HG2_PB_SVrefine2Falcon2Bionano_919;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_919:HG2_PB_SVrefine2PBcRplusDovetail_5897;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0289157;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.125301;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-208;DistBack=18812;DistForward=-110;DistMin=-110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=383;REFWIDENED=2:135790820-135791410;PctSeqSimilarity=0.9638;PctSizeSimilarity=0.9904;PctRecOverlap=0.9043;SizeDiff=2;StartDistance=-20;EndDistance=-18;GTMatch=0;TruScore=95;MatchId=2014.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:39:./.:20:19:1:12:./.:3:0:12:1:0/0:27:1:./.:.:.:.:.:.
chr2	138245288	HG3_PB_SVrefine2PBcRDovetail_1185	ATATTTTGAGGTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_305:HG4_PB_assemblyticsfalcon_13898:HG3_PB_assemblyticsfalcon_14126:HG2_PB_assemblyticsfalcon_14094:HG4_Ill_Krunchall_3219:HG3_Ill_Krunchall_3079:HG2_PB_pbsv_2310:HG2_Ill_Krunchall_3065:HG2_PB_assemblyticsPBcR_13693:HG4_Ill_Spiral_178:HG4_PB_pbsv_2328:HG3_PB_pbsv_2293:HG4_Ill_MetaSV_2723:HG3_PB_HySA_3531:HG3_Ill_MetaSV_2769:HG2_PB_HySA_4360:HG2_Ill_tnscope_238:HG2_Ill_MetaSV_2629:HG4_PB_SVrefine2PBcRDovetail_1220:HG4_PB_SVrefine2Falcon1Dovetail_1382:HG4_Ill_scalpel_2090:HG4_Ill_manta_537:HG4_Ill_GATKHCSBGrefine_1567:HG4_10X_allpass_396:HG3_PB_SVrefine2PBcRDovetail_1185:HG3_PB_SVrefine2Falcon1Dovetail_1429:HG3_Ill_scalpel_2269:HG3_Ill_manta_486:HG3_Ill_GATKHCSBGrefine_1511:HG3_10X_allpass_425:HG2_PB_SVrefine2PBcRplusDovetail_5903:HG2_PB_SVrefine2PB10Xhap12_1770:HG2_PB_SVrefine2Falcon2Bionano_923:HG2_PB_SVrefine2Falcon1plusDovetail_6372:HG2_Ill_scalpel_2143:HG2_Ill_manta_622:HG2_Ill_GATKHCSBGrefine_1502:HG2_10X_allpass_342;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_342:HG2_Ill_GATKHCSBGrefine_1502:HG2_Ill_manta_622:HG2_Ill_scalpel_2143:HG2_PB_SVrefine2Falcon1plusDovetail_6372:HG2_PB_SVrefine2Falcon2Bionano_923:HG2_PB_SVrefine2PB10Xhap12_1770:HG2_PB_SVrefine2PBcRplusDovetail_5903:HG3_10X_allpass_425:HG3_Ill_GATKHCSBGrefine_1511:HG3_Ill_manta_486:HG3_Ill_scalpel_2269:HG3_PB_SVrefine2Falcon1Dovetail_1429:HG3_PB_SVrefine2PBcRDovetail_1185:HG4_10X_allpass_396:HG4_Ill_GATKHCSBGrefine_1567:HG4_Ill_manta_537:HG4_Ill_scalpel_2090:HG4_PB_SVrefine2Falcon1Dovetail_1382:HG4_PB_SVrefine2PBcRDovetail_1220;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0918519;ClusterMaxSizeDiff=0.0918519;ClusterMaxEditDist=0.0918519;PBcalls=17;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-344;DistBack=-345;DistForward=14159;DistMin=-345;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:138245289-138245648;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2015.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:1/1:0:25:0:27:1/1:0:20:0:16:1/1:0:39:0/1:3:12:.:.:.
chr2	138490120	HG4_10X_allpass_397	TCATCCTCTTGAATTTGGATGCTTTCTATTTATTTATCTTGCCCAATTGCTCTGGCTAAGACTTCTGGTATTAAGTTGAATACAACTGGGCAAAGTGGGCATCTTGCCTTGTTCCAGATCTTAGAGGAAAATCTTTCAGTCCTTCACAGTTGATTATCATGTTAGCTGTGGGCTTGTCATATAGGGCTGCCTTTATTATGTTGAGGTAATTTCCATCTTTCCTAGTTTGTTGAGAGTTATCATGAAAGGGTGTTGAACTTTGTGAAACTTTTTTTTGGCATCTATTCAACAATCATGTGATTTGTATTCTTTATTCTGTTAATGGGATATGTCACATTAATTGATGTTTGGATGTTGTGACCCAGGAATACTC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_2312:HG2_Ill_GATKHCSBGrefine_1505:HG3_Ill_Krunchall_3082:HG3_PB_assemblyticsfalcon_14128:HG4_PB_assemblyticsfalcon_13900:HG2_Ill_tnscope_239:HG2_Ill_MetaSV_2632:HG4_PB_pbsv_2330:HG4_PB_SVrefine2PBcRDovetail_1222:HG4_PB_SVrefine2Falcon1Dovetail_1384:HG4_Ill_manta_538:HG4_Ill_SVrefine2DISCOVARDovetail_1682:HG4_10X_allpass_397:HG3_PB_SVrefine2PBcRDovetail_1187:HG3_PB_SVrefine2Falcon1Dovetail_1431:HG3_Ill_manta_487:HG3_10X_allpass_426:HG2_PB_SVrefine2PB10Xhap12_1772:HG2_Ill_manta_623:HG2_Ill_SVrefine2DISCOVARplusDovetail_6902:HG2_10X_SVrefine210Xhap12_1747:HG2_PB_PB10Xdip_16546:HG2_Ill_SpiralSDKrefine_8931:HG3_PB_pbsv_2295;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1747:HG2_Ill_SVrefine2DISCOVARplusDovetail_6902:HG2_Ill_manta_623:HG2_PB_SVrefine2PB10Xhap12_1772:HG3_10X_allpass_426:HG3_Ill_manta_487:HG3_PB_SVrefine2Falcon1Dovetail_1431:HG3_PB_SVrefine2PBcRDovetail_1187:HG4_10X_allpass_397:HG4_Ill_SVrefine2DISCOVARDovetail_1682:HG4_Ill_manta_538:HG4_PB_SVrefine2Falcon1Dovetail_1384:HG4_PB_SVrefine2PBcRDovetail_1222:HG4_PB_pbsv_2330;NumExactMatchSVs=14;ClusterMaxShiftDist=0.112994;ClusterMaxSizeDiff=0.112994;ClusterMaxEditDist=0.112994;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-372;DistBack=-486;DistForward=3170;DistMin=-486;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:138490121-138490494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2016.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:36:0|1:35:1:1:29:1|0:0:24:47:0:0/0:50:1:0/1:27:5:.:.:.
chr2	139942337	HG2_Ill_Krunchall_3085	TTATATATATATATATATATATATATATATATATATATATATATATATATA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_14115:HG3_PB_HySA_3545:HG4_PB_pbsv_2336:HG3_PB_pbsv_2304:HG4_PB_assemblyticsfalcon_13915:HG4_Ill_Krunchall_3241:HG4_Ill_GATKHC_3749:HG4_Ill_GATKHCSBGrefine_1571:HG4_Ill_250bpfermikitraw_3090:HG4_Ill_150bpfermikitraw_2972:HG4_CG_vcfBeta_1498:HG3_PB_assemblyticsfalcon_14144:HG3_Ill_Krunchall_3099:HG3_Ill_GATKHCSBGrefine_1518:HG3_Ill_250bpfermikitraw_3036:HG3_CG_vcfBeta_1303:HG2_Ill_breakscan11_306:HG2_Ill_SpiralSDKrefine_8940:HG2_Ill_Krunchall_3085:HG2_Ill_GATKHCSBGrefine_1509:HG2_Ill_250bpfermikitraw_3060:HG2_CG_vcfBeta_1384:HG2_PB_assemblyticsPBcR_13715;NumClusterSVs=23;ExactMatchIDs=HG2_CG_vcfBeta_1384:HG2_Ill_250bpfermikitraw_3060:HG2_Ill_GATKHCSBGrefine_1509:HG2_Ill_Krunchall_3085:HG2_Ill_SpiralSDKrefine_8940:HG2_Ill_breakscan11_306:HG3_CG_vcfBeta_1303:HG3_Ill_250bpfermikitraw_3036:HG3_Ill_GATKHCSBGrefine_1518:HG3_Ill_Krunchall_3099:HG3_PB_assemblyticsfalcon_14144:HG4_CG_vcfBeta_1498:HG4_Ill_150bpfermikitraw_2972:HG4_Ill_250bpfermikitraw_3090:HG4_Ill_GATKHCSBGrefine_1571:HG4_Ill_GATKHC_3749:HG4_Ill_Krunchall_3241:HG4_PB_assemblyticsfalcon_13915;NumExactMatchSVs=18;ClusterMaxShiftDist=0.170213;ClusterMaxSizeDiff=0.170213;ClusterMaxEditDist=0.170213;PBcalls=7;Illcalls=13;TenXcalls=0;CGcalls=3;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=3;HG2count=8;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=-33;DistForward=45084;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=2:139942338-139942398;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2017.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:20:1|0:4:17:33:1:1|0:0:11:12:0:0/1:12:36:./.:.:.:.:.:.
chr2	141301717	HG2_Ill_manta_629	TATATGTGCAGGTTTGTTATATAGGTAAATTTGTATCACAGGGGTATTAACTTTTGAGTTCAGGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1752:HG2_PB_HySA_4397:HG2_PB_pbsv_2324:HG3_PB_pbsv_2308:HG3_Ill_svaba_2914:HG3_Ill_manta_489:HG3_Ill_Krunchall_3114:HG3_Ill_GATKHC_3828:HG3_Ill_GATKHCSBGrefine_1525:HG3_Ill_250bpfermikitraw_3053:HG3_Ill_150bpfermikitraw_2930:HG2_Ill_svaba_2821:HG2_Ill_manta_629:HG2_Ill_SpiralSDKrefine_8949:HG2_Ill_Krunchall_3100:HG2_Ill_GATKHC_3719:HG2_Ill_GATKHCSBGrefine_1514:HG2_Ill_250bpfermikitraw_3073:HG2_Ill_150bpfermikitraw_2833:HG3_PB_HySA_3561:HG2_PB_assemblyticsfalcon_14127:HG2_PB_SVrefine2Falcon2Bionano_931;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2833:HG2_Ill_250bpfermikitraw_3073:HG2_Ill_GATKHCSBGrefine_1514:HG2_Ill_GATKHC_3719:HG2_Ill_Krunchall_3100:HG2_Ill_SpiralSDKrefine_8949:HG2_Ill_manta_629:HG2_Ill_svaba_2821:HG3_Ill_150bpfermikitraw_2930:HG3_Ill_250bpfermikitraw_3053:HG3_Ill_GATKHCSBGrefine_1525:HG3_Ill_GATKHC_3828:HG3_Ill_Krunchall_3114:HG3_Ill_manta_489:HG3_Ill_svaba_2914;NumExactMatchSVs=15;ClusterMaxShiftDist=0.137405;ClusterMaxSizeDiff=0.137405;ClusterMaxEditDist=0.137405;PBcalls=6;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-65;DistBack=7836;DistForward=-46;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=196;REFWIDENED=2:141301698-141301958;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2018.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:0|1:27:3:2:26:0|1:28:1:0:16:0/1:38:21:./.:.:.:.:.:.
chr2	142350998	HG3_Ill_SVrefine2DISCOVARDovetail_1639	TAAGAAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATTGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_139:HG4_Ill_Krunchall_3270:HG3_Ill_Krunchall_3127:HG2_Ill_Krunchall_3114:HG4_PB_assemblyticsfalcon_13940:HG2_PB_assemblyticsfalcon_14141:HG3_PB_assemblyticsfalcon_14165:HG2_PB_assemblyticsPBcR_13738:HG2_PB_HySA_4422:HG4_Ill_MetaSV_2727:HG3_Ill_MetaSV_2773:HG2_Ill_tnscope_240:HG4_PB_pbsv_2346:HG4_PB_SVrefine2PBcRDovetail_1227:HG4_PB_SVrefine2Falcon1Dovetail_1389:HG4_Ill_svaba_2902:HG4_Ill_scalpel_2128:HG4_Ill_manta_541:HG4_Ill_SVrefine2DISCOVARDovetail_1698:HG4_Ill_GATKHCSBGrefine_1578:HG3_PB_pbsv_2311:HG3_PB_SVrefine2Falcon1Dovetail_1437:HG3_PB_HySA_3579:HG3_Ill_svaba_2929:HG3_Ill_SVrefine2DISCOVARDovetail_1639:HG3_Ill_GATKHCSBGrefine_1526:HG3_10X_allpass_428:HG2_PB_pbsv_2329:HG2_PB_SVrefine2PBcRplusDovetail_5909:HG2_PB_SVrefine2Falcon2Bionano_934:HG2_PB_SVrefine2Falcon1plusDovetail_6379:HG2_Ill_svaba_2839:HG2_Ill_scalpel_2187:HG2_Ill_manta_630:HG2_Ill_SVrefine2DISCOVARplusDovetail_6918:HG2_Ill_MetaSV_2635:HG2_Ill_GATKHCSBGrefine_1516:HG2_10X_SVrefine210Xhap12_1758:HG2_Ill_breakscan11_307:HG4_Ill_Spiral_180:HG3_Ill_Spiral_2451;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1758:HG2_Ill_GATKHCSBGrefine_1516:HG2_Ill_MetaSV_2635:HG2_Ill_SVrefine2DISCOVARplusDovetail_6918:HG2_Ill_manta_630:HG2_Ill_scalpel_2187:HG2_Ill_svaba_2839:HG2_PB_SVrefine2Falcon1plusDovetail_6379:HG2_PB_SVrefine2Falcon2Bionano_934:HG2_PB_SVrefine2PBcRplusDovetail_5909:HG2_PB_pbsv_2329:HG3_10X_allpass_428:HG3_Ill_GATKHCSBGrefine_1526:HG3_Ill_SVrefine2DISCOVARDovetail_1639:HG3_Ill_svaba_2929:HG3_PB_HySA_3579:HG3_PB_SVrefine2Falcon1Dovetail_1437:HG3_PB_pbsv_2311:HG4_Ill_GATKHCSBGrefine_1578:HG4_Ill_SVrefine2DISCOVARDovetail_1698:HG4_Ill_manta_541:HG4_Ill_scalpel_2128:HG4_Ill_svaba_2902:HG4_PB_SVrefine2Falcon1Dovetail_1389:HG4_PB_SVrefine2PBcRDovetail_1227:HG4_PB_pbsv_2346;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0277778;ClusterMaxSizeDiff=0.0277778;ClusterMaxEditDist=0.0277778;PBcalls=15;Illcalls=24;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=22821;DistForward=-321;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=2:142350999-142351328;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2019.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:91:./.:0:0:0:0:./.:0:0:0:0:1/1:0:46:0/1:2:15:.:.:.
chr2	143927272	HG3_Ill_svaba_2938	TGTGGGCCCTCCAGGTTCAATCAGAACTGTCAGTGGCCCTCCAGGTTCAATCAGAACTGAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_140:HG4_PB_HySA_3541:HG2_PB_HySA_4435:HG3_PB_pbsv_2314:HG2_PB_assemblyticsfalcon_14153:HG4_PB_pbsv_2350:HG4_PB_SVrefine2Falcon1Dovetail_1393:HG4_Ill_svaba_2912:HG4_Ill_manta_542:HG4_Ill_Krunchall_3286:HG4_Ill_GATKHC_3799:HG4_Ill_GATKHCSBGrefine_1581:HG4_Ill_Cortex_1909:HG4_Ill_250bpfermikitraw_3138:HG4_Ill_150bpfermikitraw_3014:HG3_PB_SVrefine2Falcon1Dovetail_1441:HG3_PB_HySA_3592:HG3_Ill_svaba_2938:HG3_Ill_manta_490:HG3_Ill_SVrefine2DISCOVARDovetail_1649:HG3_Ill_Krunchall_3141:HG3_Ill_GATKHC_3858:HG3_Ill_GATKHCSBGrefine_1528:HG3_Ill_Cortex_1954:HG3_Ill_250bpfermikitraw_3077:HG3_Ill_150bpfermikitraw_2956:HG2_PB_pbsv_2333:HG2_PB_SVrefine2Falcon2Bionano_938:HG2_Ill_svaba_2846:HG2_Ill_manta_631:HG2_Ill_SpiralSDKrefine_8969:HG2_Ill_SVrefine2DISCOVARplusDovetail_6924:HG2_Ill_Krunchall_3127:HG2_Ill_GATKHC_3750:HG2_Ill_GATKHCSBGrefine_1518:HG2_Ill_Cortex_4513:HG2_Ill_250bpfermikitraw_3104:HG2_Ill_150bpfermikitraw_2863:HG2_10X_SVrefine210Xhap12_1762;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1762:HG2_Ill_150bpfermikitraw_2863:HG2_Ill_250bpfermikitraw_3104:HG2_Ill_Cortex_4513:HG2_Ill_GATKHCSBGrefine_1518:HG2_Ill_GATKHC_3750:HG2_Ill_Krunchall_3127:HG2_Ill_SVrefine2DISCOVARplusDovetail_6924:HG2_Ill_SpiralSDKrefine_8969:HG2_Ill_manta_631:HG2_Ill_svaba_2846:HG2_PB_SVrefine2Falcon2Bionano_938:HG2_PB_pbsv_2333:HG3_Ill_150bpfermikitraw_2956:HG3_Ill_250bpfermikitraw_3077:HG3_Ill_Cortex_1954:HG3_Ill_GATKHCSBGrefine_1528:HG3_Ill_GATKHC_3858:HG3_Ill_Krunchall_3141:HG3_Ill_SVrefine2DISCOVARDovetail_1649:HG3_Ill_manta_490:HG3_Ill_svaba_2938:HG3_PB_HySA_3592:HG3_PB_SVrefine2Falcon1Dovetail_1441:HG4_Ill_150bpfermikitraw_3014:HG4_Ill_250bpfermikitraw_3138:HG4_Ill_Cortex_1909:HG4_Ill_GATKHCSBGrefine_1581:HG4_Ill_GATKHC_3799:HG4_Ill_Krunchall_3286:HG4_Ill_manta_542:HG4_Ill_svaba_2912:HG4_PB_SVrefine2Falcon1Dovetail_1393;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0333333;PBcalls=10;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-60;DistBack=3701;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=2:143927273-143927369;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2020.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:46:1|0:6:43:27:2:1|0:0:21:24:0:0/1:29:28:./.:.:.:.:.:.
chr2	144558679	HG2_PB_SVrefine2PB10Xhap12_1782	AAGTAGCTGGGATTACAGGCATGCACCAACACACTCAGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6926:HG2_PB_HySA_4442:HG4_PB_pbsv_2351:HG2_PB_pbsv_2334:HG3_PB_pbsv_2315:HG3_Ill_250bpfermikitraw_3086:HG3_PB_HySA_3597:HG4_PB_SVrefine2PBcRDovetail_1231:HG4_PB_SVrefine2Falcon1Dovetail_1394:HG4_Ill_SVrefine2DISCOVARDovetail_1710:HG3_PB_SVrefine2Falcon1Dovetail_1442:HG3_Ill_SVrefine2DISCOVARDovetail_1653:HG2_PB_SVrefine2PBcRplusDovetail_5913:HG2_PB_SVrefine2PB10Xhap12_1782:HG2_PB_SVrefine2Falcon2Bionano_940:HG2_PB_SVrefine2Falcon1plusDovetail_6382;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6926:HG4_PB_SVrefine2PBcRDovetail_1231:HG4_PB_SVrefine2Falcon1Dovetail_1394:HG4_Ill_SVrefine2DISCOVARDovetail_1710:HG3_PB_SVrefine2Falcon1Dovetail_1442:HG3_Ill_SVrefine2DISCOVARDovetail_1653:HG2_PB_SVrefine2PBcRplusDovetail_5913:HG2_PB_SVrefine2PB10Xhap12_1782:HG2_PB_SVrefine2Falcon2Bionano_940:HG2_PB_SVrefine2Falcon1plusDovetail_6382;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0330033;ClusterMaxSizeDiff=0.0330033;ClusterMaxEditDist=0.04;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-152;DistBack=3216;DistForward=-153;DistMin=-153;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=307;REFWIDENED=2:144558680-144559138;PctSeqSimilarity=0.9917;PctSizeSimilarity=1;PctRecOverlap=0.9412;SizeDiff=0;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=97;MatchId=2021.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:1:14:0:18:./.:1:0:2:0:./.:4:0:./.:.:.:.:.:.
chr2	146842402	HG3_Ill_svaba_2959	CGATTCCTCAAGGATCTAGAACCAGAAAAACCATTTGACTCAGCAATCCCATTTCTGGGTATGTACCCAAAGGATTATAAATCATGCTACTATAAAGACACATGAATATGTATGTTTATTGTGGCACTATTCACAACAGCAAAGACTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1770:HG3_PB_pbsv_2325:HG4_PB_pbsv_2360:HG3_Ill_Krunchall_3168:HG3_Ill_MetaSV_2777:HG4_Ill_svaba_2931:HG4_Ill_manta_545:HG4_Ill_MetaSV_2733:HG4_Ill_GATKHCSBGrefine_1591:HG3_Ill_svaba_2959:HG3_Ill_scalpel_2329:HG3_Ill_SVrefine2DISCOVARDovetail_1665:HG3_Ill_GATKHCSBGrefine_1539:HG3_CG_vcfBeta_1324:HG3_10X_allpass_431:HG2_PB_pbsv_2343:HG2_PB_assemblyticsfalcon_14175:HG2_PB_SVrefine2Falcon2Bionano_944:HG2_PB_SVrefine2Falcon1plusDovetail_6386:HG2_Ill_svaba_2866:HG2_Ill_scalpel_2206:HG2_Ill_breakscan11_309:HG2_Ill_SpiralSDKrefine_8989:HG2_Ill_MetaSV_2638:HG2_Ill_GATKHCSBGrefine_1527;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1770:HG4_Ill_svaba_2931:HG4_Ill_manta_545:HG4_Ill_MetaSV_2733:HG4_Ill_GATKHCSBGrefine_1591:HG3_Ill_svaba_2959:HG3_Ill_scalpel_2329:HG3_Ill_SVrefine2DISCOVARDovetail_1665:HG3_Ill_GATKHCSBGrefine_1539:HG3_CG_vcfBeta_1324:HG3_10X_allpass_431:HG2_PB_pbsv_2343:HG2_PB_assemblyticsfalcon_14175:HG2_PB_SVrefine2Falcon2Bionano_944:HG2_PB_SVrefine2Falcon1plusDovetail_6386:HG2_Ill_svaba_2866:HG2_Ill_scalpel_2206:HG2_Ill_breakscan11_309:HG2_Ill_SpiralSDKrefine_8989:HG2_Ill_MetaSV_2638:HG2_Ill_GATKHCSBGrefine_1527;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0135135;ClusterMaxSizeDiff=0.0135135;ClusterMaxEditDist=0.0135135;PBcalls=6;Illcalls=16;TenXcalls=2;CGcalls=1;PBexactcalls=4;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=1;HG2count=11;HG3count=9;HG4count=5;NumTechs=4;NumTechsExact=4;SVLEN=-147;DistBack=134;DistForward=-146;DistMin=-146;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=641;REFWIDENED=2:146832938-146842549;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2022.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:22:0|1:31:1:0:20:0|1:55:0:0:23:0/1:38:17:./.:.:.:.:.:.
chr2	146862619	HG2_PB_pbsv_2344	TGTAACTTAGATACTATGATGTAAAGTTACAGATACCTAAATACTATGATGTATAGTTAATATATCTTAACTGAAGAAAGAATTTGACCTGGGGGCATAAGGCAGAGTGAGAGACTAAGGCAAGTTTTCGATCAGGAATGAAAGTTTATTAAAGTTTTAGAGCAGAAACAAAAGGAAGTAAAGTGTACTTGGAAGAGCAGGAGTCTTGAGTGATCCAAGTGGGCTGTCTGACCTTTGACTTGGGTTTTTTTTTTTTTCATGTTGGGAGGCTTCCAGAGTCTTTCACTTCTTCTCCCTTGATTGTCCCCTTGGGGTGGGCATCTGCATGTGCAGTGGCCTGCCTGCTAGCACTTGAGAGAAGCTGCATGCTCAGTGCGTTTACTGAAGTTGTGCACCTGCTCACTTGAGGTGTTTTTCCCTTACCAGTTGAGAGTTCCTAGAGGAAGGTCATATACCAGCTAAACTGCCATTTTGCCTCTTAGTGCACATACTTGAGCCCACTCACAAAACTCCGGAGATCTTATTGGGAAGCTGCTGATCACTAGCTTTAGGGTTTTGTTTTATCTATTAGAAGACTACCTTTTCCTAGCACCAACTGCAACCAATTGTTATTTTAGAGAGATAATATTACTTGACATTCCTGATTGGAGGGGTCCTTTTCTGCTCTGCTCATGTCTGACTAACTACCTACTGTAACATTTCCAGTTCTCCTTCTTTGCCTTCCTCTACCTTATTCCCCAACTGTCTATTATTTTCCAATAAATGTGGCTGTGTCATAGACTTATGAGATCTGAGTAAAAGGCAGTCTTTCTCCAAAGTACTAGAAATTGTTTATGAGGACAGTGATCATCTCTACTATCCTGCATAGCTCCTCACTGTTCACTGGGATTAGTCAAATTGATTTTGTAAAGTGCTTCAGGCTCCTCAGAACTGTTATATAAATAGCACATAATATTTTAATCATGTATTGTTTTTGATAGGTCTTTTGCCCTGCAGGAGATCAGCTTCCTCCTAATTTCACCTGCCAAAAGACGTTCATGACTTCTTTCCCTTTTCAGTTGTTTTTACTGTATTTGAAGACTAAGAAACCTACACACAAAATATTAGCACAAATACTATGCAATGATTAATGTATATAAAACAAACTAAAACAATAAGCAAACAAACAAAAACCTTTTAAAGTTTTGTTTAATCATGAGCCCAGCATAAACCCATGAAAAGAAGGTTAGATCAGTCCACCTCAGGAACTACAAGCTTGACCTTATCATTGGAAGTGAGTCGGCGCTGACTTGCTACTTAACTCTGTGGGAATTGATAAGCCCGTTCATCTTGTAATTTTTTGTCTATTAAAAGGATGAATTAATGGTACAAATGTCTGTGAGGATCCAATGTTGCAGTATACGTGAATGCAGTTTGTAGATTTTACTATATACAAAATACTACTATGTGAAAAGTACCAAGGTTTGTCTCATTTTCCATTAAAGTATGGTTTATTTAGGGACCATATCTTCTAAGACATGTACTTAACATGTCCTATTGTAACCAAGTGAAGTTCAGCTACTCACTGCTCAGAGGTAAGAACACGAGAAGTGAGGTATACTGAAAGGAAAGAAACATTATTCAAGTGCTAGCAGTTGGAAAATGGGCAGACTCGTGCCTCTGAAAGATCATTTCATATTTTGGGCTGGATAAGGGATTTAAGAAGGGAAACTCATTATGAGAAACATGCAGAAGTAGTATTGGATATAGGGTCTGCATATCTTGCTCCAATGTCTACCTTGAGTTATTGTCCACCTGGAGTGCAGGCTGGCTCCATCTCAGCACTGGCCAGGTTGTAGATTAACTCCCTTGAGGTAATCTCTAGATGGGAAGGATTTCTCAGCTGAGTCTCTGGGCCTGGTTCATTTCAAGATTAGCCCCTGGAATTTCTAAGCAAGCAGTTAATTAGATAAGCTGGCAGAGTGCAAGGAATGTCTAGTGGAAAGGGAGGAAAACCAAGAGTTTCAAAGTGTATTTTAAGGCTAAGACTAGACAGAATTTTAAAAAAAGGTTTAAGATGCATTTTGAAGCTAAACTAGTCAGTTACACTATAGCCTTTATAGGAAAGTCAATTCTCAAGTGGGAAAAGATGAGTACATGTTTAAAACCCATTATATATATTTGTGTGTGTGTATATATATTATATATATTATATTATATATAATATATATACACATATATAATATATTTTTTAAAAACATATATGCTTTAAAAATATATTGTATATATGCATATATAATGCAACATGCTTATATCATGTAAGCACAGAATAATACGTTTACAGTGTAGAAGCAGAAGACCAAAATCAAAATGCAAGAGCAAGTCCGAATAAAAAGCAACTCTTGCATCTTGATTTCAGTCTTGTGCTTCTAAATTGTAAAGGTATTATTCCGTGCTTACATGTTATAACCACTCTTAGAAAATGCCAGCAACACATCATCATATCTTTTTCCATATCATTACTTCTTAAATGTTGCACCATAATGATGTTGAAAAAGACATCATTACTACTACAAAGGTTGTATGCCACTAAGAACATTAAAAGATTACTGAGTAGATATGATTTTTATTTTCGTTATTATGCTGGTGTCAACTAGAAAGTTTGATCAAGAATGTAATATTCAAATTACATATTTCAGAATTTTTTCATCAAATTATGTCATATGTTGCAATAATGCGCTGTTAAAACTTTCAAATATGTCCCTGTCTCTCTTTATAAAAATCTGGCCCAAAACAAGGGCTTCTGAAACTGTTTCTGAAAACCCGTCAAAATAATAAAAGACATGAGAACATTAAAAATACATTGGAATAAAAATACCTCTGGAATGAACATGTCATTTCTTCTCTAATCTTTTATTGCCATTAAATTGTAACATTGGTTGAATTTCAAATACAATATGAGATCTCCTAAATTCAACTGTCATATTATGTTATTCTATGTGATTTTATGAGATGTTGTGTTAGCAAAGAATGGGAAAACACTGGATATAACTCAGAGTAGTATAAACTAGATAACATGATTTGACAACTGAAATTTAAAAGGGAAAGTAGGTACAGTAGTTTTAGATCAGATATCCCCCATCAAGTTGTAAATCTAGTAGAAGTGAAGTATAAAAGTTGGGAAGGATATATTGCCAGGAAAACTGTAGATCAAAATGTGTTGTGTAGAGCAGTTTTAGGATACTTCTTATTTTTGAAAAATAATTTATCTCTTTAGGTGTTACAGTGTGTTATATATAAAAAAAAGCAAGGTTAACTTTAACGATAGTATTATTAAACAACAATTAGAAACCAAATTCTTACTCTTGCACATTTTATCTTGGAGAAGAAAGCAAGATAAGATCTCTAGCTTTGAATAATAGATATTTTACATAGTAAAAACCTTCTCCAAATGAATACCCTTTTAAAAGTCATGATATTATTTTATTTAAATCATCAATATTCTGGGCATGGCTTACTTCACCAAAAGAAGATTCGTTCTTTACTGAAGCATAATTACATTATCAGATATTAAGAAGAAGCCATAAACCACAAAATGGAAATCAACCCTCCAGTGGCCATTTCATACTTTGAAGATGATTGTATTTTAACATTTTTGTTGCCAACCACAGCAGTAGCATGCTAGAATGTGAAACTCAAGCTTCAACATCACTCTAACCTGAATAAAATGTAAATATATGAACACTAAATTGAATAATCAATAATAGATTTTAGTCAGATAACCATCTCTTTGGTAGTAAGTGGCATATAGGCAAATCCATCTAAGCAAACTCCATCTTCATTAGTGTTGCGGTATTGCAAGATATTTTAGAAACAAGAAGATATTTTCATGTTTTCCGTCCTTTGTTTTTAGTCTCCATTAAAAATTTGCAGCTATACTACCACTTTCTCTTCATTGCCTATTCAGATTTGTAGGAATTCATTGAAAGAAATATCATTTTACAGATTAAATTAATGTTATTATAAAAAGCTTTAAAACTCAAACATATTTATGAGTCATGCTGAGAAAGACCTGTACTCAGTTACAATGATTAATACAAGTTGCCCAAGTTTTACAGATGAAATCACCACCATTTGCATATTTTGAGCAAGAAACAGATAACTATAATTCTAAAAGAACAACAGAAGAAGCACTGTGCTACTGATGTATCTGTTGGGATGAGCTTGCTGTTGTATTGAGCAATGTCTTGCTTTTCGGTTTCATTCATCTGTGCTAGGCAAATTTAAAAGTATTGAAAACCAAGTGTTTGTGTATTTGAGCCTATCGCGGTAGATCACCAAAATATTTCCTAATCCATTTCACTTCTTTGCAATGCAATGTGTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTTTTGAGATGGAGTCTCACTCTGTTACCCAGGCTGGCATGCAGTGGCATGATCTCAGCTCACTGCAACCTCCACGTCCTGGATTAAAGCAGTTCTCCTGCCTCAGCCTCACTAGTAGCTGGAATTAACAGGCATGCGCCACCACATCTGGCTAATTTTTGTATTCTTAGAAGAGACGGGATTTCACCATGTTGGCTAGGCTGGTCTCGAACTCCTGATCTCAGGTAATCCTCCTGCCTCAGCCTTCTAAACTGTTGGGATTACAGGCGTGAGCGCAATGTAATGTTGATGTTTCTACCATCAATAGGTGGTATCTATTTGTCTATTCTCCTGTATAGGAGCAGATTTTGTGACTTGCTTTGGCAAATAGAGTATGGCTTTTCTAGTCTTTATCTCAATGCACCAGTGTGCATGAACCTAGGTAAGACAACCTAGGTCAGGCCAGCCAACCCTAGGCAGTCATGAAATATCATAAATCACTATTGTTTAAGCTGCTAAGATTTGAGGCAAGCCGTTTCACTGGCATAAACAAACAAAACTGTATCAAAACTAAAATGATAATTTTGAAACATAATCAGCTATAACATCAAACTTCCAAACGTGTTATGTTTCTGTTACTTATATGGGAAGTACAAGATTCATGTTTCAAGAACTTAAACACTTGGAATTTACCATTTATTAGTTATGAGGGCTGGGGAGTACAAAATGTTTTTTAAAATGCAAACCATTATTTTCATCAGAACAAAACTTAAATTTTAGTCAAATCAGAAAAAAAGAAAAATAATGACAAAGTAAGCTAATGTTAATTGTTTGAATTTAGATGTAATTTTCGGTAATGTTTTGAGGACAGTGGTTCTTAAATTTGGAGAGTTTTAAAAACCCTAATACCTTACTTCCACTCTGGAGACTGCTTTAATTGATATGTGTAAGGCCCGGATATCAGTATTTTTACTCAGCTAAAGGATATAATCTAAATTCCTACCCCATATGTGTTTACAGAAATGATACAGTGAAAAACAATGGTACCTCTGCCTCCTGGGTTCAATCTTGTACTGCTACAAGATTCAAAAACAGGAAATAATTTTGTTTATATTATTTTGTAAAAAAGATAGTATATCAATATATTTAGAAATATTTGCAGCAGAAAAGACTGAAATGTTGGGAATGTCTCTGGCTAATTGAGACTTACTTATTAACAGAAACTGTTATCTATATTACTCTATTTACTTGGAATTACTGTTTGATAGGTTTACTAGACTGAATTTCTGAAACAGTTTACATATGTGTTTTGTTTTATTTTTCAAATATGGCTAAGAATCTTAAAATTTACATAATACTATTATTGTAAATAATCTAATTATAATTTCTATATCTTAAGCAAAATACATTTTCAAGTTTAATCATGATAACATAAGAAAGAAAATTGCCATTTTAGAAATAGATGTCATTGTAATACAAATATTCTATACCTTGATCTTTTTACATACTTGTAGTTTATTTATAGGCTATATAAATCCTAATTCCAAGACAATTCTCTTTCTCTCTCTCTCTCAAAATAATAGGCATTAAAATTTTTGCTAAGTAGATTTAGCTGAATTTATTTGAATTAATTTTTTAAAATATATAAAATTATATGCAATTAAATAATTATTTTCTCTGTATTTTTAGATTTAAAATTTTACTTGGATTTCACACAAAATTAATTCAAATGTTATAGTCTCCTCATCCTATTCTGTACATGTGAAAAATTAATTTTCTCTTCAAAGATACTACATTTCACTTTTCCTAGTTTGAAAAGCCTCACTATTTAAATTATCCCAAAGTGGGGTGCTCAATAAATTGAAGTCAACTTATTCTAAACATCCAGCTATTTCCTAAAGTTCTTCTACCCATTTTGACTTTCACTGCAGAATTTGGTAAGTATTGCATACATTTCCTTGTTGTTTTTACACCTTTTAAGAAGGAAAAAATTATTTGTCTGTTGATACCAGATATTAATACAAATATGATGATTGACTAAATTTTGAAATGTATTAGGATTTTCTCGCAGAACCCATACATGGCTTCTAGGATTATAGCTCTGTTGTTCAAATGCAATTGAGAATACAACAGTTTTGAGTACTATTTCCAAAGTAATGCATCTTGAAACTATGATGGTATTTTCTCCATAGGACTGTCAGTCAGTAGTAGCGATTGCGGCTGATGAATATGTTTACATCAAGACAGAAGGGCCTTTACTCTAAGTAACTGGATGATCTTGAATGACCATTTCTAGAACCCAATACCATATCCTTTGTCAAAAAGCACATAATTAAAATATCTGCTATCAAACCTGCAAATAGACTTTGTGAAAATGCACACATTTGTACCTGATGGGAAACATAACCTACCAAGACTGAATTATGAAAAAATAAAATATCTAAACAGACCAATGGGTAGTTCAGTTGAATCAGTGATTTTTAAAAATCTCCCATCAAAGAAAAGCCAAAAATCTTATGGCTTCACTGATAAATTCTACCAGAAATTTAAAGAGAACTAACACCATTCCTTTTCAAATTCTTCCAAAAAAATTAAAGAAGAGAGAGCACTTCCAAACTCATCTTATAAGGCCAATATCACTCTGATACTAAAGCCAGACAAGAACACTATAAGAAAAGAAAATTACAGGCCAATATCCCTGATGGTCATACATTTAAACCTCCAACAAAATACTAGCAAATTAAATTCAATAGCACCTTGAAAGGATCACACAGCATAATAAACTGGGATTTATTTCTGTGAAACAAGGGTGGTTCAACATTTGCAAATCAATAAATGTGATATGCTACATTAACAGAATACAAGAAAAATCACATGATAATTTTAGTTGATGCAGAAACAGCATTTGACAAAAATCACCATCCTTCATGATAAAAACTCTCAACAAATTACGTATAAAATGAATGTACCTTAACACAACAAAAGCTGCATATGACAAGCCCGCAGCTCACATCACAGTCGATGGTGAAAAGCTGAAAACCTCTTATCTTAGATCAGGAAGAAGACAAAGTTATCCATTCTCACCACTTCTATTCAATACAGTACTGGCAGTCCTAGCCAGGGAAATCAGACAGGAAAAAGAAATAAAAGGGGTCAAAATAGAAAAGGAATAATTAAATTATCTGTTTGCAGATGACATGATATTATATATAGAAAACTTTAAAGACTCCATCAAAAATCTATTAGAATTAACCAACAAATTCATTAACGTTGTAAGATACAAAATCAACCTACAAATTTCAGTTGCATTGCTATATACTAACAACAAACTATTTGAACAAAAAATTAAGAAAATAATTCCATCTACAATAGCATCGAAAAATACTAAAGTATCAATTTAACCAAGAAAGTAGAAGATATGTACACTGAAATATAAAAAGAAATCAAAGCACAAATAAATAGAAAGATATCCTATATTCATAGGTTCGAAGAATTGTCAAAATGTCTATATTGAAAGCAATCCGCTGATTCAACGCAATCGCTATCAAAATTCCAACGGAGTTTTTCACAGAAATAGAAAAAACAATACTAAAATTTGTGTGGAAGTATAACAGACTCCATGTACCTAATGCAATCTTGAGAAAGAAGAATAAAGCTGGAGACATCACACTACCTGATTTCAAATTATATTACAAAGCTGTACTTATCAAGCAGTACAGCACTAGTATAAAAATAGACACATAGACCAATGGATTAAAATAGAAAGCACAGAAATAAACACACAGGTAGATGATCATCTAATCTGCAACAAAGGTACCAAGAATATACAATGGAGAAGGGATAGTTTCTTCAATAAGAAAACCACATTTTCATGTGAAAAAAAAATTGGTTCCTAATTTTATACTAGAGATGAAAAATCAACTCAAAATTGTTAAGGACTTAAATGTAAGACATGAATTGTAAAACTCCTAGAAGAAAACAAGGAGAAGAGCTCCATGACATTGGTCTTGTGAATAATGTTTTTGGAGATGAAGTCAAAAGCACAGGCAACAAAAGAAAAAAATAAACAAGTGGGTCTACATCAAACTAAAAAGTTTGGACACAGCAAAGGAAATATTCAACAAAATGAAGAAGCAATCTATAAAATGGGAGAAAATATTTGTTAACCATGCATATAATAAGGGATTAGTTAATATCCAAAATATATAAGGAACTCATACAATTCAATCTCAAAAAACAACCTGTTTGAAAATGGTTAAAGTACCTGTATAGACATTTTTACAAAGATGAAAATGTGTTCAACATCACCAATCATGAGGGAAATGCAAATCAAAATCACAATATCACCTCACACCTGTTAGGATAGCTATTATAAAAATGTCAAAAGATATCTAGGATTGATGAGGTTGTAGAGAGAAGGGAAACTTTATGCATTATTGGTAAAAATTAGTTCAGACATTATGGAAAATAGTATGAAGGGTCCTCAAAAAATTACGAACAACTACTGTATGATACAGTAATCTCACTTTTGTGTATATATTCAAAGGAAATAAAATCACTATCTCAAAGAAATTGCTGCAATTCCATGTTCATCATAACATTATCCACAATAGCTGACACATGGAAATAAGTTGTGTCTGCCGACAGATGAATGAATAAAGAAAATGTAGTGAATATATATATCACTATATCTGTCTGTCTATCTATCTATCTATCTATCTATCTATCTATCAATCATCTATCTATCTATGGAATATTATTCAGCTATTAAAAAGAGGAAACTCCACCATTTGTGACAACATAGATTGACCTAGAGGATATTAAATAAAATATGCCAGACATAGAAAGACAAACACTTATGTTCTCACTTATATAAATGTGGAATCTAAAAAAGTCAAATTCATAGAAAGAGTGAGAGGAAGGGTGTTTACCAGGGCTCAGGGGGTGAGGTTAATGGGGAGATGCTGGTCAATGTGTATCAACTTTTAGTTGTAAAGCAAGTAAGTCCCAGAGACTTAATGTACAGCATAGTGACTGTAATGAATAATATTACGCATTGCATAGTTGAAATTTGCTAAGAGACTACATCTTAAGTATTCCTACAAGAAAAAAAGGTATTTACATGAGATAATTGATATGTTAATGAGCTTACCTTTGATAGTCATTTCACATTGTGTATATATAATATCATGTTCTACACCTTAGACAGATACAATTTTCATTGATCAGTCATATCTCAATATAACTGGGAGGAGAAGGCATATTTATTGTAACTACTCAGAAAGAGGGCAATTTGTAGTGGTTTTGTTTTGTGCTGTTTTGTTTTTCTGAATAAGACCAAAAGACAATCATATAGTAAATAATTTTCTTGGGAATAAGTAGAAGCTTATATTTAAGATCTATAGTTAACTGGTTTTATTGTTGACCTAATAAAAAGGAAATGCTCAGGCATTCTGGAAGAGTAAACTTTAGATGGGTCAAATTTGTTCATATATTTTATAATGGAATACTAGCCTGAGGGGGCATTGTAATTATGTTATTATTTCCAGTAAATTTATCATGCAAGTTTGGAGCTTGAATTTGGGAATATACAATAAATCCACAAAGTAATTAATCCAGTGTAATAAATTGTTTTGATATAACAAGATCGATGCTAACTTCTGTCCTCAGACCAGCTGTAGTTTTCAGTCTAGGAAAGTGAAAGTTCTTCACTGCTGGGATGGAAGTAAAGAGGTAGTTGGAGGAAATGGCCAGCACAGCAGGAAAACAATAGGAAGCTCCACCCCAGGAAGGAATGAAAGGCAGAGGTTAGCCCTGTAGCTCCAGTGTTCTACCCAAATCCTTCCTTTTCAGAATATAAGCAATTAACCAGAAGACCCCTGAAATCACTAACACTGTTTATATGCTCCAGTAAGCCACAGAACCAACAATCTCCTCTAATACTATTGAAGCTGAAGCTGACAAGTACCACAGGGTGGGACCACAATGCATTTGGGACATGAAAGAATTGGAATCTCAACCACACTCAAAGACACCCTCAACTATTGCACAGGATCACTTCAATTATGCTCTTTATAATACAATGTCCATTTTAGACAATTGAATTTTCAGACTCCCTTTACTGTGAAGTTTTACTGCATATATCAACTAAAACCAAATTCTGTAAGCTGTACTACCTGAGAAGCCAATATCATTTAGAGACAAAGGGTATTAGCTAATATAAGGAAACTACATAGATGATAGATTGCTCTGGAAATCACCTGATGACTTACCCATCCAGTGAAAATGAATTACAATATTTGGGTCAACCTGCCCCCAGAGGAAAAGCTAAAAAACAAACAAACAAAAAACAAACCCCACCAAAAGAAGCCAAAAAACCCACATTTGACCAATTTTTTTTTCTTAAAAATATCAAAGAGATAATAAGATGGCCAAAATAAAGGAGAAAATGAAAACCTGGAGGACATTTGCTGACCTTGAAGAAGAACCAAGGGGGAGTCCTGCTCTCAGTATTAGAAGTAATTTCCTAACAAACCAGTATCTCACAGGTAAAAACTGCAAAATTTGGGCAAAACATGACCATCTGGAAAAGAAAAGCTGGCCAATTTTGAAGAAAACTCAAAACCTAAAGAAAACTGTGGCCTGGGTGAGTTTCCTGTTTTGAGAGCTTTAAACTGAAGCTAGTGACCCACAAAAAAAGTTCAATAGAATGTCTTACATTATTCCGGCTGGGAAACAAACAAACAAAGAAGGAATGAGCTATATAGCCAGAGCTGCCAGTGAGTCGGGGAATTTCGGAGAGGAGAGAGAATGATCCACAAAGAGAGAAGGGGTCTAAAATTTCTGTGTATAAATTCTGTTCATATTTCTGGCCCACCTGTGAAGCATGCATTTATAGAGTAAGCTGAGAACAATCTGGAACAAGGTTTGATATGCTGTCCATGGGCAGGCGGGGCTGAGTTTTTGGTTTGAGTCTAACCACATTAGTTTTTTTCTAAAGCAAAAACCCTCTTTGGAGGATGGTAACAGTGTCTAGATCTCTACAACAAAACCTTCATTATATCCAGGATGTTACGGACAACTTCGTGCAAACAAATTGGAAAATTTAGACAAATGAATAAACCCCTAGGAAAACTCTTACTTAGCTGATATCAAAAATTATGAATTTATATGAAGTATGATATTAACACAAGGATAGAAAAAATGGAAGAATGAAAGTGGAGACAGAGCCAAGAAACACACATCTTTGTGTATATCAACACTGGATTTACAAAAAAGGTGTTACTAAAGACTGTGAGGGTAGGGAATGAAATTGAGCCCTATCTCACAGAATAGTCATCTTGACATCGGCATATGCCTAAGTGTGAGATGAAAAACTATAATGTTTTTTAAGCATAATATAGAAAAATAGCGTATTACTTTGTATATGCCGTTCCCTTTAATCAAGGCAAAAGTAACCACTGTATTAGTCAGGGTTCTCTAAAGGGACAGAACTAATAGGATAGATGAATATTTGAAGGGGAGTTTATTAAGAGAATTGACTCACATGATCACAACATGAAGTCCCACAATAGGCCGTCTGTAAGCTGAGGAGACAGCAAGCCAGTCTGAGTCCCTAAACCACAAAAGTAGGCAAGCCGATAGTACAGCTTTCAGTCTGTAACTGAAGGCCCCTGGCAAATCACTGGTGTAAGTCTAAGGGCCCAAAAGCTGAAGAACTTGGAGTATGATGTTCAAGGGCAGGAAGCATCCAGTATGGCAGAAAGATGAAGGCTGGAAGACTCAAACTTCTAGTCCTTCCACATTCCTCTGCCTGCTTTTATTCTAGCCACCCTGGCAGCTGATCAGATAGTACCCACCCAGATGGAGGGTGGGTTTGTCTCTCCCAGTCCACTGACTCAAATGTCAATCTCCTTTGGCCACACCCTCACTGACACACCCAGGAACAATAGTTTGCATCCTTCAAAGTTGACACTCAGTACTATCACAACCACTAAGCAAGCAAGAAAAGGCTGATAAATTTAACTACATTAAAATTAAGGATTCCTATTCCTCAAAAGATACCATAATATAATAATATAGAAATAAATATTGAAACCACAATGGAATTCCATTAAATACCAACCAGATTGGCAAACATTTTTAAATTTGACATTATCAAGGATTGGGTTTTTTTTTCCCATTCAATCCTGCATATGACAAATCAAGTATTGCTGATGATATGAAGCAATGTAGAATTTTTATACACTGTTGAAGGACATAAAAATGTATCCAGCCATTTTTGAAAGTATTATATTCTATTCAACATATTTGAAGAGACTGGAAATCCACTTTTGATTGTACCCACTATAGAAGTAGCTGGAATCTTTTTTAAATAGCCCCAAACTGGAAACAACATAACTTTCGATCTACAGTAGAACAGATAATAATTAATGGTAGGTATATTAATCAGTGGAATACTATACAGTAGTTCTATGTAAAATGTCCACTAACTGGCACTGGTACAAGAAATGTTTGATAATGTTCTATGAAGACGTAAGGATCTTGTAACATAATAAAAATTACTTCACTTAGCATATTAGGCTTTGTTTTTGTTGCTGTTGTTGGTTTTAGCAAGAATTTCTCAATAAAGATGCAGTACATTAATTTACATTCTTGTATGTTCATTTATATTTATCCTGGACTGATAATTTCTGAATCTACTCTGAGTAGCACAGATATACATGACATGGATAACTAATGAACTAGACATAAATACTGTAATATAATTCTAAAATATGTATTTAGCAAAAAAAAAAAAAGCACCAGTAATTCACACTAAGTTTCCCTGTACTTAAAGATCTAAATAGGCAAACTGATCTATATTAAGCATATTGACTATAAAAAGATGATTATCTTGAATGTTGGCAAGTTGGTTCTTTATAATGAATATGTTGTACCTATGATCAGGAAAAAAAAAACTGACAGGAAACTTGGGGTTGCCACTAATATTCTATAGGTTGATTTGTTTGATAGTTACATGGGTTTAAAATTCGTAATTATTTTTAACATTTTAAATGTGTGCCTTATGCAACTTTATATGTTTGTGGGCTATATCTCACATTAGACAAGATTTGAATAAAGAAGTTATCTGTGTGTAATGTCCAAACTAAAAAAAATGTTCCAGGTAAGAGAATAAAGTTGCAAAGAAGACACCTAAAAAAAAAAAAAAAAAAAGGAGGAAGTTTGTCTCTTTTCCAAATAAAGACCAAAAAAATCCACTTATCTGAACTGAATAATGATTTTTTAAAAATTAGATGATAACATTAGGATGAAGAATCCCAAATAAAAGGAAATTTGAGATTGTTGCACCAGTAATATATACCCTACAACTGCTGAAAGTAATGAGGTGGTGATTAGATAAAGCTGGGATGATAAAAGGCAGTTACAGAAAGGAGTGAGGACATAATATAGACAGACTTTAAAGGTCATAGGGAAAAATCTTAGCTAGGTAACTACAGATGATGTAAAAAAATGAAGGGAGGGAGGAAGGGAGATAGGGAGAAAGGAAAGGAGGATAGGAGAAAGGAAAGTAAGAAACAACAAAGAAAGGGAAGGAGGGAGGGAGGAAGGAAAGATAGAAGTAAAAAAGAAGGAAGGAAGAAAAGGAGGAAGGGAGGGAGGAAGAGAGTAACAATCACCCTCTCCATCACTCCCCAAAAACAAACTCCAATGAGAGGGAAGAAAACAAAAGATAAAATTTACTTAAAAGAAAATTTGGAGATCATAGAAAAGGACTAGGAGAAGAATACACTATAATGAGTAGAATAAGTGAATATAAATAAAAAAGACCACCATCTATAAAATCCTAGTGCCAGAAGAAAGAGAAGTTTAGTG	T	20	PASS	ClusterIDs=HG3_Ill_Krunchall_3169:HG3_PB_pbsv_2327:HG4_10X_allpass_401:HG3_10X_allpass_432:HG2_10X_allpass_344:HG2_Ill_tnscope_241:HG4_PB_pbsv_2361:HG4_Ill_MetaSV_2734:HG3_PB_pbsv_2326:HG3_PB_SVrefine2Falcon1Dovetail_1445:HG3_Ill_MetaSV_2778:HG2_PB_pbsv_2344:HG2_PB_SVrefine2PBcRplusDovetail_5916:HG2_PB_SVrefine2PB10Xhap12_1786:HG2_PB_SVrefine2Falcon2Bionano_945:HG2_PB_SVrefine2Falcon1plusDovetail_6387:HG2_10X_SVrefine210Xhap12_1771:HG2_Ill_MetaSV_2639:HG4_Ill_Krunchall_3314;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1771:HG2_PB_SVrefine2Falcon1plusDovetail_6387:HG2_PB_SVrefine2Falcon2Bionano_945:HG2_PB_SVrefine2PB10Xhap12_1786:HG2_PB_SVrefine2PBcRplusDovetail_5916:HG2_PB_pbsv_2344:HG3_Ill_MetaSV_2778:HG3_PB_SVrefine2Falcon1Dovetail_1445:HG3_PB_pbsv_2326:HG4_Ill_MetaSV_2734:HG4_PB_pbsv_2361;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00810573;ClusterMaxSizeDiff=0.00810573;ClusterMaxEditDist=0.0131111;PBcalls=9;Illcalls=6;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-14243;DistBack=-12043;DistForward=-14243;DistMin=-14243;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:146862620-146876864;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2023.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:76:54:0|1:52:0:1:25:0|1:46:0:0:29:0/1:63:22:0/1:366:176:14275:.:.
chr2	150759300	HG3_Ill_manta_498	CAAACAAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_3173:HG3_Ill_Krunchall_3188:HG2_PB_pbsv_2349:HG3_Ill_MetaSV_2783:HG3_Ill_scalpel_2343:HG3_Ill_manta_498:HG3_Ill_GATKHCSBGrefine_1543:HG3_10X_allpass_437:HG2_Ill_GATKHCSBGrefine_1531:HG2_10X_allpass_345:HG3_PB_pbsv_2333:HG2_Ill_breakscan11_311:HG2_Ill_tnscope_242:HG4_PB_SVrefine2Falcon1Dovetail_1403:HG3_PB_SVrefine2PBcRDovetail_1191:HG3_PB_SVrefine2Falcon1Dovetail_1450:HG3_Ill_SVrefine2DISCOVARDovetail_1686:HG2_PB_SVrefine2Falcon2Bionano_947:HG2_10X_SVrefine210Xhap12_1780;NumClusterSVs=19;ExactMatchIDs=HG2_10X_allpass_345:HG2_Ill_GATKHCSBGrefine_1531:HG3_10X_allpass_437:HG3_Ill_GATKHCSBGrefine_1543:HG3_Ill_manta_498:HG3_Ill_scalpel_2343;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00621118;ClusterMaxSizeDiff=0.00621118;ClusterMaxEditDist=0.046729;PBcalls=6;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-321;DistBack=72604;DistForward=-322;DistMin=-322;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=2:150759296-150759630;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2024.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:0|1:28:1:3:27:1|0:0:22:33:0:0/1:35:16:0/1:20:4:.:.:.
chr2	151817481	HG2_CG_vcfBeta_1417	CTTCAAAACCCCTTAAAACTCCCCCACTCTGGTGCCAACTTGGACAACATTCTTTTATGCACTCTTTTTTAG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_2368:HG3_PB_HySA_3643:HG3_PB_pbsv_2341:HG2_PB_HySA_4487:HG4_Ill_svaba_2959:HG4_Ill_scalpel_2175:HG4_Ill_manta_548:HG4_Ill_Krunchall_3343:HG4_Ill_GATKHC_3862:HG4_Ill_GATKHCSBGrefine_1598:HG4_Ill_250bpfermikitraw_3192:HG4_Ill_150bpfermikitraw_3068:HG4_CG_vcfBeta_1541:HG4_10X_allpass_404:HG3_PB_assemblyticsfalcon_14225:HG3_Ill_svaba_2982:HG3_Ill_Krunchall_3194:HG3_Ill_GATKHC_3915:HG3_Ill_GATKHCSBGrefine_1550:HG3_Ill_250bpfermikitraw_3131:HG3_Ill_150bpfermikitraw_3008:HG2_PB_pbsv_2357:HG2_Ill_svaba_2889:HG2_Ill_SpiralSDKrefine_9009:HG2_Ill_Krunchall_3180:HG2_Ill_GATKHC_3811:HG2_Ill_GATKHCSBGrefine_1536:HG2_Ill_250bpfermikitraw_3155:HG2_Ill_150bpfermikitraw_2915:HG2_CG_vcfBeta_1417:HG2_10X_allpass_346;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_346:HG2_CG_vcfBeta_1417:HG2_Ill_150bpfermikitraw_2915:HG2_Ill_250bpfermikitraw_3155:HG2_Ill_GATKHCSBGrefine_1536:HG2_Ill_GATKHC_3811:HG2_Ill_Krunchall_3180:HG2_Ill_SpiralSDKrefine_9009:HG2_Ill_svaba_2889:HG2_PB_pbsv_2357:HG3_Ill_150bpfermikitraw_3008:HG3_Ill_250bpfermikitraw_3131:HG3_Ill_GATKHCSBGrefine_1550:HG3_Ill_GATKHC_3915:HG3_Ill_Krunchall_3194:HG3_Ill_svaba_2982:HG3_PB_assemblyticsfalcon_14225:HG4_10X_allpass_404:HG4_CG_vcfBeta_1541:HG4_Ill_150bpfermikitraw_3068:HG4_Ill_250bpfermikitraw_3192:HG4_Ill_GATKHCSBGrefine_1598:HG4_Ill_GATKHC_3862:HG4_Ill_Krunchall_3343:HG4_Ill_manta_548:HG4_Ill_scalpel_2175:HG4_Ill_svaba_2959;NumExactMatchSVs=27;ClusterMaxShiftDist=0.041958;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.0559441;PBcalls=6;Illcalls=21;TenXcalls=2;CGcalls=2;PBexactcalls=2;Illexactcalls=21;TenXexactcalls=2;CGexactcalls=2;HG2count=11;HG3count=9;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-71;DistBack=30308;DistForward=-69;DistMin=-69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:151817482-151817554;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2025.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:25:0|1:25:0:1:21:1|0:0:28:25:0:0/1:29:23:./.:.:.:.:.:.
chr2	151903083	HG4_PB_SVrefine2Falcon1Dovetail_1406	TAAACAATTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCACCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_312:HG4_Ill_Krunchall_3345:HG2_PB_assemblyticsfalcon_14202:HG4_PB_assemblyticsfalcon_14001:HG3_PB_assemblyticsfalcon_14227:HG2_PB_assemblyticsPBcR_13796:HG2_PB_HySA_4489:HG4_Ill_MetaSV_2736:HG3_Ill_MetaSV_2786:HG2_Ill_tnscope_243:HG4_PB_pbsv_2369:HG4_PB_SVrefine2Falcon1Dovetail_1406:HG4_Ill_scalpel_2176:HG4_Ill_manta_549:HG4_Ill_SVrefine2DISCOVARDovetail_1741:HG4_Ill_GATKHCSBGrefine_1599:HG4_10X_allpass_405:HG3_PB_pbsv_2342:HG3_PB_SVrefine2PBcRDovetail_1195:HG3_PB_SVrefine2Falcon1Dovetail_1456:HG3_Ill_scalpel_2346:HG3_Ill_manta_500:HG3_Ill_SVrefine2DISCOVARDovetail_1693:HG3_Ill_GATKHCSBGrefine_1551:HG3_10X_allpass_439:HG2_PB_pbsv_2358:HG2_PB_SVrefine2PBcRplusDovetail_5921:HG2_PB_SVrefine2Falcon2Bionano_951:HG2_PB_SVrefine2Falcon1plusDovetail_6392:HG2_Ill_scalpel_2229:HG2_Ill_manta_639:HG2_Ill_SVrefine2DISCOVARplusDovetail_6951:HG2_Ill_MetaSV_2643:HG2_Ill_GATKHCSBGrefine_1537:HG2_10X_allpass_347:HG2_10X_SVrefine210Xhap12_1787;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1787:HG2_10X_allpass_347:HG2_Ill_GATKHCSBGrefine_1537:HG2_Ill_MetaSV_2643:HG2_Ill_SVrefine2DISCOVARplusDovetail_6951:HG2_Ill_manta_639:HG2_Ill_scalpel_2229:HG2_PB_SVrefine2Falcon1plusDovetail_6392:HG2_PB_SVrefine2Falcon2Bionano_951:HG2_PB_SVrefine2PBcRplusDovetail_5921:HG2_PB_pbsv_2358:HG3_10X_allpass_439:HG3_Ill_GATKHCSBGrefine_1551:HG3_Ill_SVrefine2DISCOVARDovetail_1693:HG3_Ill_manta_500:HG3_Ill_scalpel_2346:HG3_PB_SVrefine2Falcon1Dovetail_1456:HG3_PB_SVrefine2PBcRDovetail_1195:HG3_PB_pbsv_2342:HG4_10X_allpass_405:HG4_Ill_GATKHCSBGrefine_1599:HG4_Ill_SVrefine2DISCOVARDovetail_1741:HG4_Ill_manta_549:HG4_Ill_scalpel_2176:HG4_PB_SVrefine2Falcon1Dovetail_1406:HG4_PB_pbsv_2369;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0400729;ClusterMaxSizeDiff=0.0400729;ClusterMaxEditDist=0.0400729;PBcalls=14;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-276;DistBack=36456;DistForward=12408;DistMin=12408;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=2:151903084-151903365;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2026.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:1/1:1:33:0:28:1/1:0:25:0:20:1/1:0:53:./.:.:.:.:.:.
chr2	152041204	HG2_PB_pbsv_2361	TTAAGCATAATATTGGCAAAGCATGATTTTTTCCTTGACAAGGATGAATTGCTCAATATAAACCCTGGGAAGAACTAATATGAACAAAGAAAAAAAATAAAGAGAATCCAGAATAAGGTAGTTTCTGAATATCAGATATTACAGAGCAAAGGAAAAATACCATAAAATATTTCGTGCATGATAAAACCTTGCTTATTCAAATTTTTGGTACATAAGAATGGCACATATACCGCAAAATAGAAGGTGATTAAGAAATAAGTTATTTCATTTTAGAGGGTAGTCACACATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1790:HG3_PB_pbsv_2344:HG4_PB_pbsv_2372:HG4_PB_assemblyticsfalcon_14005:HG4_Ill_svaba_2963:HG4_Ill_manta_550:HG4_Ill_MetaSV_2738:HG4_Ill_GATKHCSBGrefine_1601:HG4_10X_allpass_406:HG3_PB_assemblyticsfalcon_14230:HG3_Ill_svaba_2986:HG3_Ill_MetaSV_2787:HG3_Ill_GATKHCSBGrefine_1553:HG3_10X_allpass_440:HG2_PB_pbsv_2361:HG2_PB_SVrefine2Falcon1plusDovetail_6394:HG2_Ill_svaba_2893:HG2_Ill_SpiralSDKrefine_9012:HG2_Ill_MetaSV_2645:HG2_Ill_GATKHCSBGrefine_1539:HG2_10X_allpass_348:HG2_PB_assemblyticsfalcon_14206:HG2_PB_assemblyticsPBcR_13798:HG3_Ill_Spiral_2507:HG2_Ill_tnscope_244:HG4_Ill_Krunchall_3347:HG2_Ill_Krunchall_3183:HG2_PB_SVrefine2PBcRplusDovetail_5922:HG2_PB_SVrefine2PB10Xhap12_1795:HG2_PB_SVrefine2Falcon2Bionano_952;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_348:HG2_Ill_GATKHCSBGrefine_1539:HG2_Ill_MetaSV_2645:HG2_Ill_SpiralSDKrefine_9012:HG2_Ill_svaba_2893:HG2_PB_SVrefine2Falcon1plusDovetail_6394:HG2_PB_pbsv_2361:HG3_10X_allpass_440:HG3_Ill_GATKHCSBGrefine_1553:HG3_Ill_MetaSV_2787:HG3_Ill_svaba_2986:HG3_PB_assemblyticsfalcon_14230:HG4_10X_allpass_406:HG4_Ill_GATKHCSBGrefine_1601:HG4_Ill_MetaSV_2738:HG4_Ill_manta_550:HG4_Ill_svaba_2963:HG4_PB_assemblyticsfalcon_14005:HG4_PB_pbsv_2372;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0596491;ClusterMaxSizeDiff=0.0596491;ClusterMaxEditDist=0.0596491;PBcalls=11;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-288;DistBack=46484;DistForward=-287;DistMin=-287;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:152041205-152041493;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2027.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:37:0|1:42:2:0:30:1|0:0:40:70:0:0/1:58:28:./.:.:.:.:.:.
chr2	152617288	HG3_PB_SVrefine2PBcRDovetail_1197	TGCACTCTATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGAGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_313:HG4_PB_assemblyticsfalcon_14007:HG3_PB_assemblyticsfalcon_14233:HG2_PB_assemblyticsPBcR_13802:HG2_PB_assemblyticsfalcon_14210:HG2_Ill_Krunchall_3189:HG4_PB_HySA_3585:HG4_Ill_Spiral_183:HG3_Ill_Spiral_2514:HG2_Ill_Spiral_146:HG3_PB_pbsv_2345:HG4_PB_pbsv_2373:HG2_PB_pbsv_2363:HG4_Ill_MetaSV_2739:HG2_Ill_tnscope_245:HG4_PB_SVrefine2Falcon1Dovetail_1409:HG4_Ill_scalpel_2182:HG4_Ill_manta_551:HG4_Ill_SVrefine2DISCOVARDovetail_1746:HG4_Ill_GATKHCSBGrefine_1602:HG4_10X_allpass_407:HG3_PB_SVrefine2PBcRDovetail_1197:HG3_PB_SVrefine2Falcon1Dovetail_1459:HG3_Ill_scalpel_2353:HG3_Ill_manta_501:HG3_Ill_MetaSV_2788:HG3_Ill_GATKHCSBGrefine_1554:HG3_10X_allpass_441:HG2_PB_SVrefine2PBcRplusDovetail_5924:HG2_PB_SVrefine2Falcon2Bionano_954:HG2_PB_SVrefine2Falcon1plusDovetail_6396:HG2_PB_HySA_4491:HG2_Ill_scalpel_2234:HG2_Ill_manta_640:HG2_Ill_SVrefine2DISCOVARplusDovetail_6958:HG2_Ill_MetaSV_2646:HG2_Ill_GATKHCSBGrefine_1540:HG2_10X_allpass_349:HG2_10X_SVrefine210Xhap12_1791;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1791:HG2_10X_allpass_349:HG2_Ill_GATKHCSBGrefine_1540:HG2_Ill_MetaSV_2646:HG2_Ill_SVrefine2DISCOVARplusDovetail_6958:HG2_Ill_manta_640:HG2_Ill_scalpel_2234:HG2_PB_HySA_4491:HG2_PB_SVrefine2Falcon1plusDovetail_6396:HG2_PB_SVrefine2Falcon2Bionano_954:HG2_PB_SVrefine2PBcRplusDovetail_5924:HG3_10X_allpass_441:HG3_Ill_GATKHCSBGrefine_1554:HG3_Ill_MetaSV_2788:HG3_Ill_manta_501:HG3_Ill_scalpel_2353:HG3_PB_SVrefine2Falcon1Dovetail_1459:HG3_PB_SVrefine2PBcRDovetail_1197:HG4_10X_allpass_407:HG4_Ill_GATKHCSBGrefine_1602:HG4_Ill_SVrefine2DISCOVARDovetail_1746:HG4_Ill_manta_551:HG4_Ill_scalpel_2182:HG4_PB_SVrefine2Falcon1Dovetail_1409;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0806452;ClusterMaxSizeDiff=0.0806452;ClusterMaxEditDist=0.0806452;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=10034;DistForward=-303;DistMin=-303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:152617289-152617616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2028.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:65:1/1:0:8:1:7:1/1:0:18:0:11:1/1:0:52:./.:1:7:.:.:.
chr2	153153401	HG4_Ill_GATKHCSBGrefine_1605	TATGTTTCTCTGTTGAAAGAAATGCTATGCCTTTGTGAAAATTGCCATTCTGTAAAAGTACTACTGAAGAATAGGACTCTGCTAAGGA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_14217:HG3_PB_HySA_3658:HG3_Ill_Krunchall_3208:HG3_Ill_Spiral_2518:HG4_PB_pbsv_2379:HG2_PB_HySA_4502:HG4_PB_assemblyticsfalcon_14014:HG4_PB_SVrefine2PBcRDovetail_1243:HG4_PB_SVrefine2Falcon1Dovetail_1411:HG4_Ill_svaba_2970:HG4_Ill_manta_553:HG4_Ill_SVrefine2DISCOVARDovetail_1753:HG4_Ill_Krunchall_3354:HG4_Ill_GATKHC_3874:HG4_Ill_GATKHCSBGrefine_1605:HG4_Ill_Cortex_1917:HG4_Ill_250bpfermikitraw_3203:HG4_Ill_150bpfermikitraw_3078:HG4_CG_vcfBeta_1553:HG4_10X_allpass_408:HG3_PB_pbsv_2349:HG3_PB_assemblyticsfalcon_14238:HG3_PB_SVrefine2PBcRDovetail_1199:HG3_PB_SVrefine2Falcon1Dovetail_1461:HG3_Ill_svaba_2997:HG3_Ill_scalpel_2355:HG3_Ill_manta_503:HG3_Ill_SVrefine2DISCOVARDovetail_1702:HG3_Ill_Krunchall_3207:HG3_Ill_GATKHC_3935:HG3_Ill_GATKHCSBGrefine_1556:HG3_Ill_Cortex_1962:HG3_Ill_250bpfermikitraw_3145:HG3_Ill_150bpfermikitraw_3023:HG3_CG_vcfBeta_1345:HG3_10X_allpass_442:HG2_PB_pbsv_2367:HG2_PB_assemblyticsPBcR_13810:HG2_PB_SVrefine2PBcRplusDovetail_5927:HG2_PB_SVrefine2PB10Xhap12_1800:HG2_PB_SVrefine2Falcon2Bionano_958:HG2_PB_SVrefine2Falcon1plusDovetail_6398:HG2_Ill_svaba_2900:HG2_Ill_scalpel_2237:HG2_Ill_manta_642:HG2_Ill_SpiralSDKrefine_9021:HG2_Ill_Krunchall_3193:HG2_Ill_GATKHC_3824:HG2_Ill_GATKHCSBGrefine_1542:HG2_Ill_Cortex_4534:HG2_Ill_250bpfermikitraw_3165:HG2_Ill_150bpfermikitraw_2925:HG2_CG_vcfBeta_1429:HG2_10X_allpass_350:HG2_10X_SVrefine210Xhap12_1799:HG4_PB_HySA_3592:HG2_Ill_breakscan11_315:HG2_Ill_Spiral_148;NumClusterSVs=58;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1799:HG2_10X_allpass_350:HG2_CG_vcfBeta_1429:HG2_Ill_150bpfermikitraw_2925:HG2_Ill_250bpfermikitraw_3165:HG2_Ill_Cortex_4534:HG2_Ill_GATKHCSBGrefine_1542:HG2_Ill_GATKHC_3824:HG2_Ill_Krunchall_3193:HG2_Ill_SpiralSDKrefine_9021:HG2_Ill_manta_642:HG2_Ill_scalpel_2237:HG2_Ill_svaba_2900:HG2_PB_SVrefine2Falcon1plusDovetail_6398:HG2_PB_SVrefine2Falcon2Bionano_958:HG2_PB_SVrefine2PB10Xhap12_1800:HG2_PB_SVrefine2PBcRplusDovetail_5927:HG2_PB_assemblyticsPBcR_13810:HG2_PB_pbsv_2367:HG3_10X_allpass_442:HG3_CG_vcfBeta_1345:HG3_Ill_150bpfermikitraw_3023:HG3_Ill_250bpfermikitraw_3145:HG3_Ill_Cortex_1962:HG3_Ill_GATKHCSBGrefine_1556:HG3_Ill_GATKHC_3935:HG3_Ill_Krunchall_3207:HG3_Ill_SVrefine2DISCOVARDovetail_1702:HG3_Ill_manta_503:HG3_Ill_scalpel_2355:HG3_Ill_svaba_2997:HG3_PB_SVrefine2Falcon1Dovetail_1461:HG3_PB_SVrefine2PBcRDovetail_1199:HG3_PB_assemblyticsfalcon_14238:HG3_PB_pbsv_2349:HG4_10X_allpass_408:HG4_CG_vcfBeta_1553:HG4_Ill_150bpfermikitraw_3078:HG4_Ill_250bpfermikitraw_3203:HG4_Ill_Cortex_1917:HG4_Ill_GATKHCSBGrefine_1605:HG4_Ill_GATKHC_3874:HG4_Ill_Krunchall_3354:HG4_Ill_SVrefine2DISCOVARDovetail_1753:HG4_Ill_manta_553:HG4_Ill_svaba_2970:HG4_PB_SVrefine2Falcon1Dovetail_1411:HG4_PB_SVrefine2PBcRDovetail_1243:HG4_PB_assemblyticsfalcon_14014;NumExactMatchSVs=49;ClusterMaxShiftDist=0.0227273;ClusterMaxSizeDiff=0.0227273;ClusterMaxEditDist=0.0229885;PBcalls=18;Illcalls=33;TenXcalls=4;CGcalls=3;PBexactcalls=13;Illexactcalls=29;TenXexactcalls=4;CGexactcalls=3;HG2count=23;HG3count=19;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-87;DistBack=2860;DistForward=8359;DistMin=2860;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=2:153153402-153153493;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2029.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:./.:1:9:0:4:1/1:0:9:0:14:1/1:0:43:./.:.:.:.:.:.
chr2	154064575	HG2_Ill_breakscan11_316	ATTTTTTTTTTTTTTTTTTTAAAAGGACATGAGGATGATTTATTTGGCAGTCAGATCTTAAGAGGGCAGCAGAACTAGCAAATGGCCAACCCTGAGCCCAAATG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1803:HG3_PB_HySA_3668:HG4_Ill_Spiral_185:HG2_Ill_Spiral_149:HG4_PB_pbsv_2384:HG4_PB_assemblyticsfalcon_14023:HG4_PB_SVrefine2Falcon1Dovetail_1415:HG4_Ill_svaba_2976:HG4_Ill_manta_555:HG4_Ill_MetaSV_2742:HG4_Ill_GATKHC_3885:HG4_Ill_GATKHCSBGrefine_1607:HG4_CG_vcfBeta_1557:HG4_10X_allpass_410:HG3_PB_pbsv_2355:HG3_PB_assemblyticsfalcon_14244:HG3_PB_SVrefine2PBcRDovetail_1203:HG3_PB_SVrefine2Falcon1Dovetail_1463:HG3_Ill_svaba_3005:HG3_Ill_scalpel_2363:HG3_Ill_manta_505:HG3_Ill_MetaSV_2792:HG3_Ill_GATKHC_3944:HG3_Ill_GATKHCSBGrefine_1559:HG3_10X_allpass_443:HG2_PB_pbsv_2372:HG2_PB_assemblyticsfalcon_14223:HG2_PB_SVrefine2Falcon1plusDovetail_6402:HG2_Ill_svaba_2906:HG2_Ill_scalpel_2244:HG2_Ill_manta_644:HG2_Ill_breakscan11_316:HG2_Ill_SpiralSDKrefine_9024:HG2_Ill_MetaSV_2648:HG2_Ill_GATKHC_3830:HG2_Ill_GATKHCSBGrefine_1544:HG4_Ill_SVrefine2DISCOVARDovetail_1757:HG3_Ill_SVrefine2DISCOVARDovetail_1707;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1544:HG2_Ill_GATKHC_3830:HG2_Ill_MetaSV_2648:HG2_Ill_SpiralSDKrefine_9024:HG2_Ill_breakscan11_316:HG2_Ill_manta_644:HG2_Ill_scalpel_2244:HG2_Ill_svaba_2906:HG2_PB_SVrefine2Falcon1plusDovetail_6402:HG2_PB_assemblyticsfalcon_14223:HG2_PB_pbsv_2372:HG3_10X_allpass_443:HG3_Ill_GATKHCSBGrefine_1559:HG3_Ill_GATKHC_3944:HG3_Ill_MetaSV_2792:HG3_Ill_manta_505:HG3_Ill_scalpel_2363:HG3_Ill_svaba_3005:HG3_PB_SVrefine2Falcon1Dovetail_1463:HG3_PB_SVrefine2PBcRDovetail_1203:HG3_PB_assemblyticsfalcon_14244:HG3_PB_pbsv_2355:HG4_10X_allpass_410:HG4_CG_vcfBeta_1557:HG4_Ill_GATKHCSBGrefine_1607:HG4_Ill_GATKHC_3885:HG4_Ill_MetaSV_2742:HG4_Ill_manta_555:HG4_Ill_svaba_2976:HG4_PB_SVrefine2Falcon1Dovetail_1415:HG4_PB_assemblyticsfalcon_14023:HG4_PB_pbsv_2384;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0192308;ClusterMaxSizeDiff=0.0192308;ClusterMaxEditDist=0.0483092;PBcalls=11;Illcalls=23;TenXcalls=3;CGcalls=1;PBexactcalls=10;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=1;HG2count=13;HG3count=13;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-103;DistBack=19658;DistForward=-86;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=2:154064570-154064683;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2030.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:43:0|1:45:3:1:37:1|0:0:20:35:0:0/1:37:22:./.:.:.:.:.:.
chr2	154411691	HG2_PB_SVrefine2PBcRplusDovetail_5931	ACAGAAGCTTTACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_150:HG3_PB_assemblyticsfalcon_14246:HG3_PB_SVrefine2Falcon1Dovetail_1465:HG2_PB_assemblyticsfalcon_14224:HG2_PB_assemblyticsPBcR_13819:HG3_Ill_Krunchall_3216:HG2_Ill_Krunchall_3200:HG2_PB_SVrefine2PB10Xhap12_1806:HG2_PB_PB10Xdip_16600:HG2_PB_PB10Xdip_16599:HG3_PB_HySA_3671:HG2_PB_HySA_4510:HG3_PB_pbsv_2357:HG2_Ill_tnscope_246:HG2_Ill_MetaSV_2649:HG3_PB_SVrefine2PBcRDovetail_1204:HG3_Ill_scalpel_2364:HG3_Ill_manta_506:HG3_Ill_SVrefine2DISCOVARDovetail_1711:HG3_Ill_GATKHCSBGrefine_1560:HG2_PB_pbsv_2373:HG2_PB_SVrefine2PBcRplusDovetail_5931:HG2_PB_SVrefine2PB10Xhap12_1805:HG2_PB_SVrefine2Falcon2Bionano_962:HG2_PB_SVrefine2Falcon1plusDovetail_6403:HG2_Ill_scalpel_2245:HG2_Ill_manta_645:HG2_Ill_SVrefine2DISCOVARplusDovetail_6967:HG2_Ill_GATKHCSBGrefine_1545:HG2_10X_allpass_351:HG2_10X_SVrefine210Xhap12_1804:HG3_Ill_Spiral_2526;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1804:HG2_10X_allpass_351:HG2_Ill_GATKHCSBGrefine_1545:HG2_Ill_SVrefine2DISCOVARplusDovetail_6967:HG2_Ill_manta_645:HG2_Ill_scalpel_2245:HG2_PB_PB10Xdip_16599:HG3_PB_SVrefine2PBcRDovetail_1204:HG3_Ill_scalpel_2364:HG3_Ill_manta_506:HG3_Ill_SVrefine2DISCOVARDovetail_1711:HG3_Ill_GATKHCSBGrefine_1560:HG2_PB_pbsv_2373:HG2_PB_SVrefine2PBcRplusDovetail_5931:HG2_PB_SVrefine2PB10Xhap12_1805:HG2_PB_SVrefine2Falcon2Bionano_962:HG2_PB_SVrefine2Falcon1plusDovetail_6403;NumExactMatchSVs=17;ClusterMaxShiftDist=0.100486;ClusterMaxSizeDiff=0.100486;ClusterMaxEditDist=0.106969;PBcalls=16;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=21;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=21454;DistForward=-300;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:154411692-154412022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2031.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:47:0|1:22:1:0:38:1|0:1:29:37:0:0/1:26:19:0/1:25:6:.:.:.
chr2	154494936	HG4_PB_SVrefine2PBcRDovetail_1247	CACCCGGGATAGTAATAGAAATAGTAAAAAAGTAGTACAGTTAAGGATATATTTTAAAGGTAGAACATGCAGCAGTGCTGATAAAAAACGGATGAAGTAGGGGGATGGAAGAATTGCTAGAATAGTACATCTTTGAATAGGTGAAAGGGGATGAAATCTAGTACACAAGGAGAAGGAGTGATTGTGAGTAGGAAAATGAAGAGCTTCTCCATAGCAA	AAGC	20	PASS	ClusterIDs=HG2_Ill_Krunchall_3201:HG4_Ill_GATKHCSBGrefine_1609:HG3_Ill_GATKHCSBGrefine_1562:HG2_Ill_GATKHCSBGrefine_1547:HG4_10X_allpass_411:HG3_Ill_scalpel_2365:HG3_10X_allpass_444:HG2_10X_allpass_352:HG4_PB_HySA_3600:HG4_Ill_Spiral_186:HG3_Ill_Spiral_2527:HG2_Ill_Spiral_151:HG3_PB_SVrefine2PBcRDovetail_1205:HG4_PB_assemblyticsfalcon_14025:HG4_PB_SVrefine2PBcRDovetail_1247:HG4_PB_SVrefine2Falcon1Dovetail_1417:HG4_Ill_manta_556:HG4_Ill_Cortex_1919:HG3_Ill_Cortex_1964:HG2_PB_SVrefine2Falcon2Bionano_963:HG2_PB_SVrefine2Falcon1plusDovetail_6404:HG2_Ill_manta_646:HG2_Ill_Cortex_4539:HG2_10X_SVrefine210Xhap12_1805:HG4_PB_pbsv_2386:HG3_PB_pbsv_2358:HG2_PB_pbsv_2375:HG2_PB_assemblyticsfalcon_14227:HG4_Ill_MetaSV_2743:HG3_Ill_MetaSV_2794:HG2_Ill_MetaSV_2650:HG4_Ill_Krunchall_3363:HG3_Ill_Krunchall_3217;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1805:HG2_Ill_Cortex_4539:HG2_Ill_manta_646:HG2_PB_SVrefine2Falcon1plusDovetail_6404:HG2_PB_SVrefine2Falcon2Bionano_963:HG3_Ill_Cortex_1964:HG4_Ill_Cortex_1919:HG4_Ill_manta_556:HG4_PB_SVrefine2Falcon1Dovetail_1417:HG4_PB_SVrefine2PBcRDovetail_1247:HG4_PB_assemblyticsfalcon_14025;NumExactMatchSVs=11;ClusterMaxShiftDist=0.190955;ClusterMaxSizeDiff=0.190955;ClusterMaxEditDist=0.190955;PBcalls=11;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-213;DistBack=-189;DistForward=-186;DistMin=-189;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:154494936-154495152;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.9907;PctRecOverlap=0.9908;SizeDiff=-2;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=2032.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:31:./.:6:18:23:7:1|0:0:23:76:0:0/1:35:10:./.:.:.:.:.:.
chr2	154895772	HG2_PB_SVrefine2Falcon2Bionano_965	ATATTTATCCAAATGAAAATAAATCAGTAGATCAAAGAGTTATCTTTACCTCCATGCTTATTGCAGCACTATTCACAATAGTCAAGATATAGAATCAACGTAAGTACTCCTCAACAGATAAATGGATCAAGAAAAATGTGGTATGTATACACAATGGAATATTATTCAGCCATTAAAAGAAGGAAATCAGGTCGTCTGCAGCTACATGAGTGAACCTGGAAGACCTTATGTTAAATTAAATGAATCAGGCACAAAAAGATAAGTACTGCATGTTCTCACTCAAGTGGAAGCTAAAAAAACAAAAATGAGTTTATAGAAATAGAGAGTAGAATTACAGTTGTTAGAAGCTGGGATGGGTAGCAGGGAGGAGAGGAGAGGGAGAAGTTACCTAATGGATGCAGAATTACAACTAGATGGGAGGAAAAAGTTCTAGTGTTCTGTAGCACTGTAGGGTGAATATACCTAACAATAATTTATTGTATATGTTAAAAATACTAGAAGAGAGGATTTTAAATGCCTCCTACAAAAAGAAATGAGAAATATTTGAGGTGATGGATATGCTAATTACCCTAATTTGGTCATTACACATTGTATACATGTATAGGGATATTGTATGCTCCATATATATGTACAATTATTATGTGTCAACTAAAAACAAAAGAAAAAAGTGTCTATAATTATTCAGGTATAATTTTACACTGTTATCTGTAGCTTACTCTGGCCTCTTATGTTGACAAACTGTGTTTTTTAAGTTCACTTTACTGAATGACATATTTACTGTTAACTCATTTCATGTAGTTTTTATTAAATAATTATTCAATGCCTACTACATATCTGTCAGACACTTGATAAGTGTTGAATGCACAGTGTCACGTGAGACATGGTTCCTGTCTCCAGTGAGTTATTGTCCAATGCAGAAGAAAGATACACACACACATGCACATGTGTATTTTGGAGGATAGGGTGAACTAAAAGTCCAGGATTGCATAAGTAAAATGTGAAAATGCTCAAATCAAGAAGGTCATTGTGAGTTCTTTAAAGCCCAAACCAAATGTGTTCAAATCTAAGTCATCTTTCTGATGTATCTTAGGCATTGAAGTTTTGGTGCACTGAGTAGAATACATCGTGATTATGAAATGTTTTCATTGGGACGTAGTATAAATTAATTGATAATGGTAAAGACTTTGAAATCATATTGTCTTGGTTCAATTTTTTCCCCTCAACACATCAGCTGTATGATTATGGATAGGTTTTTAACCTTTGGGTTTCACTGTCCTCATATGTAAAGTAAGCAAATAGTGCTAATACTTCTTGGACTTGTTATGAGAATGAATAGGTAATACCTACAAAATGTTTTGAGTGTTGTCCTTACACATAGGGATTAGACAATATCCACTATTATTTTAAAGTTACTTTAATGATATTGCTTATTTGGGAAGCAGATTTTTTTTGCCTTTTCTATATCAGAATGGTTAGTTGAAAATATTTTACTTTTAAAATAATTATTGAACTGGGAAAATGATTTCATCAGCAAGATACAGAAAAAAGTTGGCAAAGGTAAAAATACTTTTATTTTTCATCAAAATATTAATATATTATTTTTCTGATTTATGGCTCAGACCTATTCATTATTATTCCTTAGATGCTCGAATCCTCCATACAATGTGGTACTTTTAAAGAGAACATCTGTTTTTGTACAAAGTGTTGCTATGAAACTTCAGTAGGAAAACATAGCAAACACATATACAAAGTTTAGTACTGCAGCTAAGGCATGGGATTATATTGGTTTGGTTTGTTCATTAAAAAAAGGAAACAATTATTAGCTAAACCACACATTTCAGATGAATAAGGATAAGAAATTCAGGGATTATATTGTTCTTTGGTAAAAAATCTTTGTTTTATAGATTTCAGTGCCTTGAAGGCTCATAGGAAATGTAGCTTCTTTTATGTCTAAATGTGTTTTGTTATAGAAATTACTCAAGCTATCTTAAATGAAGACCTCAATTGAAGTTTTTAGACTATATTATTTTGCTTGTATTCCACAATAACTGTGTTATTACTTCCAATCTTTGATTCTGAGAAATCTGGCCTTTATTTTTTAGAGAGAGAAAATCTCTTGAGAGTTTTGAGATTAGTGTAGAAATATGCAATTTTTTATTCCTTCTAAATTTCACGCTTTTATATTAGAAGATGTTCTGTGAGGTTTTTTTCTGGACAGATATTAAGACAGAATCAATCAAAACCAACGTAAACACACTGTTAAATTCACACACAAGAAAAGAGGTGTGTCATCAATTAATTTACATAAATTATCTAGCTGGCTTTGAAACCTATTGACATGTGAGAAGTTCAGAGTTCCTTCAGCATAGGGCATTCTGTTAAGAATATACATGTTTAAACAGACAAAAGAATTTATATAGATACCATAGACATTTTCTGTAATGATATGAAGTATAATTTGTATTTACTTTCTTCAAATATGGGAATCTCTAATGTCTTTCAAAATTACCATGATGTTGAAGACAATGTTTATAGTGATCTCATATACAAGTATAGATTTTACTGCTCTAGTGATATCATTTACAAGTATAGATTTTACTGCTCTTTCTTCTTTGTTTCTGTGCAATCTGTTACACCAACCAAAAATAAGATTGAACCGAGATATGATTTTTAGTAAACTTGGTGCTTAGTAAATTTATTTAGATACTTAGTAAATTAACTAAAATTAATTTAGGTGTTTAGTATATTTATTGAATGAAATCTAGCCTAATATTTATAACTGGAATGTTTTATAATTGATTTATAAAAATCACAAGTGATGTTCTTTTTATACAGTATCTATGTCTTTATCAAGTCATAGAGATTATATACTTAGTATAAAGAGCAACATCAAGATTTTGATGGCTGGAAAGAACACTAGAGGAGGACCCCTGAATATCCATTTTCACTTAACTTATCTGAGTCTGTTACCTTGAGCATAAAACGGAAACGATGACATTACCCCAGTAATTATAGTTTTGTGTTTTTCCCCAGTCACCTTAGAAATATGTGCTAAGTACCTCATTATGTGCTGCTCATAATTTTAAATACTGTACTGAGGATTTGCTCCCTACTTTCAAAGAAATACCTTATAGTCAGTGGGGGAAAAAAAACTAGCAGACTTTTACTACAAGGTAATATGTTATGACATTATAATTTGGTTTTATTTGTTGGTCGCAGCTTAAATATCACCTCTTCAGAGGAATTTCCTGATCACCCAGTCTAAAGCAGCCTTCCAGACAATATCATAATCTTTTTTAAAGTGCACAGCACTATCTAAATTTTCTTTCTTATTTGTTCATTATTTTTCTGTCTCCCCTCAAATAAAATGTCAGTCTTATGGCTGCAGATACTATGTTATTCTTTTC	GATT	20	PASS	ClusterIDs=HG4_Ill_MetaSV_2745:HG4_PB_assemblyticsfalcon_14028:HG4_PB_SVrefine2Falcon1Dovetail_1418:HG3_PB_assemblyticsfalcon_14249:HG3_PB_SVrefine2Falcon1Dovetail_1467:HG2_Ill_SpiralSDKrefine_9026:HG2_Ill_tnscope_247:HG2_PB_assemblyticsPBcR_13821:HG2_PB_SVrefine2PBcRplusDovetail_5933:HG2_PB_SVrefine2PB10Xhap12_1809:HG2_PB_SVrefine2Falcon2Bionano_965:HG2_PB_SVrefine2Falcon1plusDovetail_6406:HG2_10X_SVrefine210Xhap12_1808:HG2_Ill_MetaSV_2652:HG2_PB_assemblyticsfalcon_14232:HG2_10X_allpass_353:HG4_PB_pbsv_2388:HG2_PB_pbsv_2377;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1808:HG2_PB_SVrefine2Falcon1plusDovetail_6406:HG2_PB_SVrefine2Falcon2Bionano_965:HG2_PB_SVrefine2PB10Xhap12_1809:HG2_PB_SVrefine2PBcRplusDovetail_5933:HG2_PB_assemblyticsPBcR_13821;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0116891;ClusterMaxSizeDiff=0.0116891;ClusterMaxEditDist=0.0116891;PBcalls=12;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-3403;DistBack=-3407;DistForward=67612;DistMin=-3407;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:154895772-154899178;PctSeqSimilarity=0.9996;PctSizeSimilarity=1;PctRecOverlap=0.9991;SizeDiff=0;StartDistance=0;EndDistance=3;GTMatch=0;TruScore=99;MatchId=2033.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:19:7:2:11:0|1:75:0:0:24:0/1:58:21:0/1:248:123:3353:.:.
chr2	156188112	HG2_Ill_scalpel_2252	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGTTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAGGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1812:HG4_Ill_MetaSV_2746:HG2_PB_HySA_4518:HG4_PB_pbsv_2392:HG4_PB_HySA_3612:HG4_Ill_svaba_2989:HG4_Ill_scalpel_2194:HG4_Ill_SVrefine2DISCOVARDovetail_1763:HG4_Ill_GATKHCSBGrefine_1617:HG3_PB_SVrefine2PBcRDovetail_1207:HG3_Ill_svaba_3022:HG3_Ill_MetaSV_2797:HG3_Ill_GATKHCSBGrefine_1566:HG2_PB_pbsv_2380:HG2_Ill_svaba_2920:HG2_Ill_scalpel_2252:HG2_Ill_MetaSV_2654:HG2_Ill_GATKHCSBGrefine_1552:HG2_10X_allpass_354:HG3_PB_pbsv_2363:HG3_PB_SVrefine2Falcon1Dovetail_1471:HG2_PB_SVrefine2Falcon1plusDovetail_6408:HG4_PB_SVrefine2Falcon1Dovetail_1422:HG4_PB_SVrefine2PBcRDovetail_1249:HG3_Ill_SVrefine2DISCOVARDovetail_1718:HG2_Ill_SVrefine2DISCOVARplusDovetail_6972;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_354:HG2_Ill_GATKHCSBGrefine_1552:HG2_Ill_MetaSV_2654:HG2_Ill_scalpel_2252:HG2_Ill_svaba_2920:HG2_PB_pbsv_2380:HG3_Ill_GATKHCSBGrefine_1566:HG3_Ill_MetaSV_2797:HG3_Ill_svaba_3022:HG3_PB_SVrefine2PBcRDovetail_1207:HG4_Ill_GATKHCSBGrefine_1617:HG4_Ill_SVrefine2DISCOVARDovetail_1763:HG4_Ill_scalpel_2194:HG4_Ill_svaba_2989:HG4_PB_HySA_3612:HG4_PB_pbsv_2392;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0791557;ClusterMaxSizeDiff=0.0791557;ClusterMaxEditDist=0.202128;PBcalls=10;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-182;DistBack=157220;DistForward=-171;DistMin=-171;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=194;REFWIDENED=2:156187934-156188309;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2034.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:18:0|1:22:0:0:17:./.:0:5:21:0:0/1:12:15:./.:.:.:.:.:.
chr2	157272376	HG4_Ill_svaba_2995	TAAATAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAACAAAAACA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1815:HG4_PB_pbsv_2397:HG3_PB_pbsv_2369:HG2_PB_assemblyticsfalcon_14245:HG2_PB_assemblyticsPBcR_13836:HG2_Ill_Krunchall_3220:HG2_PB_HySA_4528:HG2_Ill_MetaSV_2655:HG4_PB_HySA_3618:HG4_Ill_svaba_2995:HG4_Ill_scalpel_2201:HG4_Ill_manta_558:HG4_Ill_MetaSV_2748:HG4_Ill_GATKHC_3911:HG4_Ill_GATKHCSBGrefine_1619:HG4_10X_allpass_412:HG3_Ill_svaba_3029:HG3_Ill_scalpel_2379:HG3_Ill_manta_510:HG3_Ill_MetaSV_2798:HG3_Ill_GATKHCSBGrefine_1569:HG3_10X_allpass_447:HG2_Ill_svaba_2924:HG2_Ill_scalpel_2256:HG2_Ill_manta_647:HG2_Ill_GATKHCSBGrefine_1553:HG2_Ill_150bpfermikitraw_2946:HG2_10X_allpass_355:HG2_Ill_breakscan11_317:HG4_PB_assemblyticsfalcon_14041:HG2_PB_pbsv_2382:HG4_PB_SVrefine2Falcon1Dovetail_1425:HG4_Ill_SVrefine2DISCOVARDovetail_1769:HG3_Ill_SVrefine2DISCOVARDovetail_1723:HG2_PB_SVrefine2PBcRplusDovetail_5936:HG2_PB_SVrefine2PB10Xhap12_1812:HG2_PB_SVrefine2Falcon2Bionano_967:HG2_PB_SVrefine2Falcon1plusDovetail_6410:HG2_Ill_SVrefine2DISCOVARplusDovetail_6976;NumClusterSVs=39;ExactMatchIDs=HG2_10X_allpass_355:HG2_Ill_150bpfermikitraw_2946:HG2_Ill_GATKHCSBGrefine_1553:HG2_Ill_manta_647:HG2_Ill_scalpel_2256:HG2_Ill_svaba_2924:HG3_10X_allpass_447:HG3_Ill_GATKHCSBGrefine_1569:HG3_Ill_MetaSV_2798:HG3_Ill_manta_510:HG3_Ill_scalpel_2379:HG3_Ill_svaba_3029:HG4_10X_allpass_412:HG4_Ill_GATKHCSBGrefine_1619:HG4_Ill_GATKHC_3911:HG4_Ill_MetaSV_2748:HG4_Ill_manta_558:HG4_Ill_scalpel_2201:HG4_Ill_svaba_2995:HG4_PB_HySA_3618;NumExactMatchSVs=20;ClusterMaxShiftDist=0.209913;ClusterMaxSizeDiff=0.209913;ClusterMaxEditDist=0.209913;PBcalls=13;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=8;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-179;DistBack=20794;DistForward=-168;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=715;REFWIDENED=2:157271672-157282435;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2035.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:59:./.:0:5:0:3:1/1:0:13:0:12:1/1:0:40:./.:.:.:.:.:.
chr2	158433337	HG4_Ill_scalpel_2206	TTGAAATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1210:HG2_PB_assemblyticsfalcon_14251:HG2_PB_assemblyticsPBcR_13841:HG2_Ill_Krunchall_3227:HG2_PB_HySA_4534:HG3_PB_pbsv_2370:HG4_PB_pbsv_2398:HG4_PB_SVrefine2PBcRDovetail_1250:HG4_PB_SVrefine2Falcon1Dovetail_1426:HG4_Ill_scalpel_2206:HG4_Ill_manta_559:HG4_Ill_MetaSV_2750:HG4_Ill_GATKHCSBGrefine_1620:HG4_10X_allpass_413:HG3_PB_SVrefine2Falcon1Dovetail_1476:HG3_Ill_scalpel_2387:HG3_Ill_manta_511:HG3_Ill_GATKHCSBGrefine_1570:HG3_10X_allpass_448:HG2_PB_pbsv_2383:HG2_PB_SVrefine2PBcRplusDovetail_5938:HG2_PB_SVrefine2PB10Xhap12_1813:HG2_PB_SVrefine2Falcon2Bionano_969:HG2_PB_SVrefine2Falcon1plusDovetail_6412:HG2_Ill_scalpel_2263:HG2_Ill_manta_648:HG2_Ill_SpiralSDKrefine_9042:HG2_Ill_SVrefine2DISCOVARplusDovetail_6982:HG2_Ill_MetaSV_2659:HG2_Ill_GATKHCSBGrefine_1554:HG2_10X_allpass_356:HG2_10X_SVrefine210Xhap12_1818:HG2_Ill_breakscan11_318:HG4_Ill_Spiral_187:HG4_Ill_MetaSV_2749:HG3_Ill_Spiral_2548:HG3_Ill_MetaSV_2799:HG2_Ill_tnscope_248:HG2_Ill_Spiral_152:HG2_Ill_MetaSV_2658;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1818:HG2_10X_allpass_356:HG2_Ill_GATKHCSBGrefine_1554:HG2_Ill_MetaSV_2659:HG2_Ill_SVrefine2DISCOVARplusDovetail_6982:HG2_Ill_SpiralSDKrefine_9042:HG2_Ill_manta_648:HG2_Ill_scalpel_2263:HG2_PB_SVrefine2Falcon1plusDovetail_6412:HG2_PB_SVrefine2Falcon2Bionano_969:HG2_PB_SVrefine2PB10Xhap12_1813:HG2_PB_SVrefine2PBcRplusDovetail_5938:HG2_PB_pbsv_2383:HG3_10X_allpass_448:HG3_Ill_GATKHCSBGrefine_1570:HG3_Ill_manta_511:HG3_Ill_scalpel_2387:HG3_PB_SVrefine2Falcon1Dovetail_1476:HG4_10X_allpass_413:HG4_Ill_GATKHCSBGrefine_1620:HG4_Ill_MetaSV_2750:HG4_Ill_manta_559:HG4_Ill_scalpel_2206:HG4_PB_SVrefine2Falcon1Dovetail_1426:HG4_PB_SVrefine2PBcRDovetail_1250:HG4_PB_pbsv_2398;NumExactMatchSVs=26;ClusterMaxShiftDist=0.169209;ClusterMaxSizeDiff=0.169209;ClusterMaxEditDist=0.192362;PBcalls=14;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=16243;DistForward=30046;DistMin=16243;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=2:158433338-158433678;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2036.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:4:16:0:17:./.:0:25:2:26:1/1:0:48:0/1:2:10:.:.:.
chr2	158719085	HG2_PB_SVrefine2PB10Xhap12_1814	TGAAAAGGTAACTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_153:HG2_PB_pbsv_2385:HG2_PB_HySA_4537:HG4_PB_assemblyticsfalcon_14048:HG3_PB_assemblyticsfalcon_14268:HG2_PB_assemblyticsfalcon_14253:HG2_PB_assemblyticsPBcR_13843:HG3_PB_pbsv_2372:HG4_PB_pbsv_2400:HG4_Ill_MetaSV_2752:HG3_Ill_MetaSV_2801:HG2_Ill_MetaSV_2661:HG4_PB_SVrefine2PBcRDovetail_1252:HG4_PB_SVrefine2Falcon1Dovetail_1428:HG4_Ill_manta_560:HG4_Ill_SVrefine2DISCOVARDovetail_1771:HG4_Ill_GATKHCSBGrefine_1621:HG3_PB_SVrefine2PBcRDovetail_1212:HG3_PB_SVrefine2Falcon1Dovetail_1478:HG3_Ill_scalpel_2388:HG3_Ill_manta_512:HG3_Ill_SVrefine2DISCOVARDovetail_1727:HG3_Ill_GATKHCSBGrefine_1572:HG3_10X_allpass_449:HG2_PB_SVrefine2PBcRplusDovetail_5939:HG2_PB_SVrefine2PB10Xhap12_1814:HG2_PB_SVrefine2Falcon2Bionano_970:HG2_PB_SVrefine2Falcon1plusDovetail_6413:HG2_Ill_manta_649:HG2_Ill_SVrefine2DISCOVARplusDovetail_6983:HG2_Ill_GATKHCSBGrefine_1556:HG2_10X_allpass_357:HG2_10X_SVrefine210Xhap12_1821:HG2_Ill_breakscan11_319:HG4_Ill_Spiral_188:HG3_Ill_Spiral_2549;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1821:HG2_10X_allpass_357:HG2_Ill_GATKHCSBGrefine_1556:HG2_Ill_SVrefine2DISCOVARplusDovetail_6983:HG2_Ill_manta_649:HG2_PB_SVrefine2Falcon1plusDovetail_6413:HG2_PB_SVrefine2Falcon2Bionano_970:HG2_PB_SVrefine2PB10Xhap12_1814:HG2_PB_SVrefine2PBcRplusDovetail_5939:HG3_10X_allpass_449:HG3_Ill_GATKHCSBGrefine_1572:HG3_Ill_SVrefine2DISCOVARDovetail_1727:HG3_Ill_manta_512:HG3_Ill_scalpel_2388:HG3_PB_SVrefine2Falcon1Dovetail_1478:HG3_PB_SVrefine2PBcRDovetail_1212:HG4_Ill_GATKHCSBGrefine_1621:HG4_Ill_SVrefine2DISCOVARDovetail_1771:HG4_Ill_manta_560:HG4_PB_SVrefine2Falcon1Dovetail_1428:HG4_PB_SVrefine2PBcRDovetail_1252;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0949263;ClusterMaxSizeDiff=0.0949263;ClusterMaxEditDist=0.0949263;PBcalls=16;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=-196;DistForward=-297;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:158719086-158719411;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2037.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:1:28:1:22:1/1:0:38:0:25:1/1:1:16:./.:1:17:.:.:.
chr2	158794017	HG3_PB_SVrefine2Falcon1Dovetail_1480	CTGGTTGTCTTAGTTGGCTTGGGCACCAACTATAACAAACACCATAGACTGGTGATTTAAATAACAGAGACCCTTTTCACAGTTCTGGAGGTTGGAAGACCAAGATCAGGGTGCTGGCATGGATGGCA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_1816:HG2_PB_assemblyticsfalcon_14255:HG2_PB_SVrefine2Falcon1plusDovetail_6415:HG3_PB_pbsv_2374:HG2_PB_pbsv_2387:HG2_10X_SVrefine210Xhap12_1823:HG2_10X_SVrefine210Xhap12_1822:HG4_PB_SVrefine2Falcon1Dovetail_1430:HG3_PB_SVrefine2PBcRDovetail_1214:HG3_PB_SVrefine2Falcon1Dovetail_1480:HG3_Ill_SVrefine2DISCOVARDovetail_1729:HG2_PB_SVrefine2PBcRplusDovetail_5941;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_1816:HG4_PB_SVrefine2Falcon1Dovetail_1430:HG3_PB_SVrefine2PBcRDovetail_1214:HG3_PB_SVrefine2Falcon1Dovetail_1480:HG3_Ill_SVrefine2DISCOVARDovetail_1729:HG2_PB_SVrefine2PBcRplusDovetail_5941;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0859375;ClusterMaxSizeDiff=0.0859375;ClusterMaxEditDist=0.09375;PBcalls=9;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-127;DistBack=5744;DistForward=-126;DistMin=-126;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=251;REFWIDENED=2:158794018-158794395;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2038.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:./.:16:20:10:8:./.:0:2:2:1:0/1:9:5:./.:.:.:.:.:.
chr2	159958799	HG2_PB_SVrefine2PB10Xhap12_1818	TTATTTGTTTTGAGACAAGGTCTTGCTGTGTCACCCAGGCTGGAGTGCAGTGGTGCTATCAAGGCTCACTGTAGCCTCAACCTCCTGGGCTCAAGCGATCCTTCCACCTCAGCCTCAAGTAGCTGGGACCACAGGCATGCACCACCATGCCCAGCTAATTTAATTCTTTGCTTTTTTCTTTTTTTTCCTAGAGATGAGGTTTTTGCCATGTTGCCTAGTTTGGTCTTGAACTCCTGGCCTCAAGTGATTCTCCCAACTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCAGCTCTTGCTTAATATTTTATCACGAGCAATTTCCAGTTTACTTGAAGAGTTTGATATTTGTTGTCCATTGTTTCATTATTTTATAATTGATTTTTAAACATTTCTGATTGTTGGATATTTGCTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTATTGCCCAGGCTGGAGTGCAGTGGTGTGATCTGGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCTTCAGCCTTCCGAGTAGCTGGGACTACAGGCACCCACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGATCCCACGATCCGCCCACCTTGGCCTCCCAGAGTGCTGGGATTACAGGCATGAGCCACCCCTCCCAGCCAGATACTTACTTTTTAAAAAAATTTTTAGCATGTTATAATGTTTTCGCTATTCCTGGTGTGAATATTTTTTAATTATGGTGAAATACATATAACAAAATTGACCATCTTAACCATTTAAGTGTACAGTTCAGTGGTAATTACACTCACGTTGTTGTACAACCCATCTTTAGAACTTCCAACAGGAATACTTTTGTCCAGTGATATTTACAAACATCTCTGATATCTCCTTGGGGTAGCAGGTTCCCAGCAGTGGAATTATTGAACTAAATGGCCTGCATTTATAAAGAGTCTTGATACATAGTGCCCACTTCCTTTCCAGAAAGGCTGTATTGATTTCATATTCCCCCCAGCATTCTTTGAGTGGCTGCTTTTTGAAATTCACATCTTCTGGGAACAGCTTAAATGGATGGTGCTTTGTGCGGCCTAACTGTGGACTACTGACAATTTTAAGAGGCTGAGACGTCATTCTGTAGCTGCCTTCTTTAGAACTTCCCTTCTGTCTGCACTTCTCAGGCAATTTTCATTTTCTTTCTTTGCATGAGACTGTGTCGGGAATTATGACAGCTGAGTCAGATCAAGTTCATGGTCAGAAAAACATTCAGTTGGCTCCCAGTTTCAGCCGCCTGGTGCGGATCCTAGAGATCATGGAGGTTCACAGGCATGTTGGAGTTGGAGAGGCCTCCAGAGCACATCCTGTCCAGGCCTCTTTGCAGATGTGCAAGCAAAGACCCCTTGGTCATTAGGGAACTTGTCCAAAATTCATACAAGTTATTGGTAGACCCTGATCCTCCATGCTGTCCCCAGCGTCTTCTCTTATGTCAGCCAGCCTGTGCCGATGTTCTGCCTGTACGTTGTTGGCTTGTGAGCTGTAAATAATGTGAGTGTGTTCTGATTTCATAGAAGGTGTGGGCAGGAGGAGGGCATGGGCTTAAAGCCTCACATGGATCCATGAGGCTGCTTCTTGGAGGGTGAAGAATAACACAGGACATGCACAGCCCCATTTCTCCTTGTAGAGCCAGCTGGTTCTAGTCCTTGCTTCCACTGCTGAGTGGTTGGGACCACAGTTGACATCTAACCTTCAGAAAGGATAGTTCCTCCTGCTGAGGTGAATAGGAGAGCATTCTTTGTTTCCTCCTGGAAACTTGTTATATGATGGCCTCCTTACTGCGTGCCCAGCTGTGAACGTGACGCACAGATTTTCTGTTGTACTTGAACATGTGTTCATACATAGAACCAGTGTGCATGCATTTGCTCCACTTCAAGTCCATTTATTCCCCTGCCAATGAGTCCTGGTTCACCTGTATACAATTTGGCTATACTCTGGAGTCAGACCAGGAATTTTAAAGGGTACTGATGATGCCCAGCTCCTACGTTCAGAGACTCAGATTAAATGCATATGAAGTATGGTCTGGACATTGGGATTTTTAAAAAGGCTTCCTCGGTGATTCTAATATGTAACAAAGTTTGAGAATTACTGATAAAGAATATGTGATTATCTCATATAATTGCTTTTTCATGAGGACAAATATATGTGTATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1825:HG2_Ill_SVrefine2DISCOVARplusDovetail_6990:HG3_PB_pbsv_2377:HG2_PB_SVrefine2Falcon1plusDovetail_6416:HG4_PB_pbsv_2404:HG4_PB_SVrefine2PBcRDovetail_1255:HG4_PB_SVrefine2Falcon1Dovetail_1432:HG4_Ill_SVrefine2DISCOVARDovetail_1776:HG4_Ill_MetaSV_2753:HG3_PB_SVrefine2PBcRDovetail_1217:HG3_PB_SVrefine2Falcon1Dovetail_1483:HG3_PB_HySA_3704:HG3_Ill_MetaSV_2802:HG2_PB_pbsv_2389:HG2_PB_SVrefine2PBcRplusDovetail_5942:HG2_PB_SVrefine2PB10Xhap12_1818:HG2_PB_SVrefine2Falcon2Bionano_972:HG2_PB_HySA_4545;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1825:HG4_PB_SVrefine2PBcRDovetail_1255:HG4_PB_SVrefine2Falcon1Dovetail_1432:HG4_Ill_SVrefine2DISCOVARDovetail_1776:HG4_Ill_MetaSV_2753:HG3_PB_SVrefine2PBcRDovetail_1217:HG3_PB_SVrefine2Falcon1Dovetail_1483:HG3_PB_HySA_3704:HG3_Ill_MetaSV_2802:HG2_PB_pbsv_2389:HG2_PB_SVrefine2PBcRplusDovetail_5942:HG2_PB_SVrefine2PB10Xhap12_1818:HG2_PB_SVrefine2Falcon2Bionano_972:HG2_PB_HySA_4545;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0327796;ClusterMaxSizeDiff=0.0327796;ClusterMaxEditDist=0.0341161;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-2269;DistBack=39313;DistForward=-2269;DistMin=-2269;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=994;REFWIDENED=2:159958800-159962062;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2039.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:0:8:0:13:./.:0:0:0:0:./.:0:2:1/1:4:157:2395:.:.
chr2	160181552	HG4_Ill_150bpfermikitraw_3121	TATTATATATATATATATATTATATATATATATATATTATATATATATATATTATATATA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_14265:HG2_PB_HySA_4554:HG3_PB_HySA_3712:HG4_Ill_GATKHC_3941:HG4_Ill_GATKHCSBGrefine_1628:HG3_Ill_GATKHC_3998:HG3_Ill_GATKHCSBGrefine_1576:HG2_Ill_GATKHC_3881:HG2_Ill_GATKHCSBGrefine_1561:HG4_PB_assemblyticsfalcon_14062:HG4_Ill_250bpfermikitraw_3244:HG4_Ill_150bpfermikitraw_3121:HG3_PB_assemblyticsfalcon_14285:HG3_Ill_scalpel_2399:HG3_Ill_manta_515:HG3_Ill_Krunchall_3263:HG3_Ill_150bpfermikitraw_3066:HG2_PB_assemblyticsPBcR_13860:HG2_Ill_manta_654:HG2_Ill_Krunchall_3240:HG2_Ill_250bpfermikitraw_3207:HG2_Ill_150bpfermikitraw_2969:HG4_PB_pbsv_2410:HG4_PB_HySA_3641:HG3_Ill_scalpel_2398:HG3_Ill_Krunchall_3262:HG3_Ill_150bpfermikitraw_3065:HG3_PB_pbsv_2384:HG2_PB_pbsv_2395;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_2969:HG2_Ill_250bpfermikitraw_3207:HG2_Ill_Krunchall_3240:HG2_Ill_manta_654:HG2_PB_assemblyticsPBcR_13860:HG3_Ill_150bpfermikitraw_3066:HG3_Ill_Krunchall_3263:HG3_Ill_manta_515:HG3_Ill_scalpel_2399:HG3_PB_assemblyticsfalcon_14285:HG4_Ill_150bpfermikitraw_3121:HG4_Ill_250bpfermikitraw_3244:HG4_PB_assemblyticsfalcon_14062;NumExactMatchSVs=13;ClusterMaxShiftDist=0.234234;ClusterMaxSizeDiff=0.234234;ClusterMaxEditDist=0.234234;PBcalls=10;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=12;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=-32;DistForward=-12;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=60;REFWIDENED=2:160181541-160181659;PctSeqSimilarity=0.9699;PctSizeSimilarity=0.9833;PctRecOverlap=0.7213;SizeDiff=-1;StartDistance=-16;EndDistance=-17;GTMatch=0;TruScore=89;MatchId=2040.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:61:./.:0:5:0:2:./.:2:7:1:6:1/1:0:32:./.:.:.:.:.:.
chr2	160855851	HG2_Ill_manta_655	TTACGTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTCTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_321:HG4_10X_allpass_417:HG2_PB_SVrefine2PB10Xhap12_1828:HG4_PB_assemblyticsfalcon_14066:HG3_PB_assemblyticsfalcon_14290:HG2_PB_PB10Xdip_16627:HG2_PB_assemblyticsPBcR_13863:HG4_Ill_Krunchall_3408:HG3_Ill_Krunchall_3266:HG2_Ill_Krunchall_3243:HG2_PB_HySA_4563:HG2_Ill_Spiral_154:HG4_PB_pbsv_2414:HG3_PB_pbsv_2389:HG4_PB_SVrefine2PBcRDovetail_1262:HG4_PB_SVrefine2Falcon1Dovetail_1439:HG4_Ill_scalpel_2221:HG4_Ill_manta_565:HG4_Ill_SVrefine2DISCOVARDovetail_1782:HG4_Ill_MetaSV_2758:HG4_Ill_GATKHCSBGrefine_1633:HG3_PB_SVrefine2PBcRDovetail_1222:HG3_PB_SVrefine2Falcon1Dovetail_1489:HG3_Ill_scalpel_2402:HG3_Ill_manta_516:HG3_Ill_SVrefine2DISCOVARDovetail_1740:HG3_Ill_GATKHCSBGrefine_1580:HG3_10X_allpass_453:HG2_PB_pbsv_2401:HG2_PB_assemblyticsfalcon_14270:HG2_PB_SVrefine2PBcRplusDovetail_5948:HG2_PB_SVrefine2PB10Xhap12_1827:HG2_PB_SVrefine2Falcon1plusDovetail_6422:HG2_Ill_scalpel_2271:HG2_Ill_manta_655:HG2_Ill_SVrefine2DISCOVARplusDovetail_6997:HG2_Ill_MetaSV_2665:HG2_Ill_GATKHCSBGrefine_1563:HG2_10X_allpass_361:HG2_10X_SVrefine210Xhap12_1829:HG4_Ill_MetaSV_2757:HG3_Ill_MetaSV_2805:HG2_Ill_tnscope_250;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1829:HG2_10X_allpass_361:HG2_Ill_GATKHCSBGrefine_1563:HG2_Ill_MetaSV_2665:HG2_Ill_SVrefine2DISCOVARplusDovetail_6997:HG2_Ill_manta_655:HG2_Ill_scalpel_2271:HG2_PB_SVrefine2Falcon1plusDovetail_6422:HG2_PB_SVrefine2PB10Xhap12_1827:HG2_PB_SVrefine2PBcRplusDovetail_5948:HG2_PB_assemblyticsfalcon_14270:HG2_PB_pbsv_2401:HG3_10X_allpass_453:HG3_Ill_GATKHCSBGrefine_1580:HG3_Ill_SVrefine2DISCOVARDovetail_1740:HG3_Ill_manta_516:HG3_Ill_scalpel_2402:HG3_PB_SVrefine2Falcon1Dovetail_1489:HG3_PB_SVrefine2PBcRDovetail_1222:HG4_Ill_GATKHCSBGrefine_1633:HG4_Ill_MetaSV_2758:HG4_Ill_SVrefine2DISCOVARDovetail_1782:HG4_Ill_manta_565:HG4_Ill_scalpel_2221:HG4_PB_SVrefine2Falcon1Dovetail_1439:HG4_PB_SVrefine2PBcRDovetail_1262;NumExactMatchSVs=26;ClusterMaxShiftDist=0.072327;ClusterMaxSizeDiff=0.072327;ClusterMaxEditDist=0.072327;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=81117;DistForward=14002;DistMin=14002;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=2:160855852-160856186;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2041.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:41:0|1:21:1:2:33:1|0:0:47:29:1:0/1:17:11:0/1:22:14:.:.:.
chr2	160946166	HG4_PB_SVrefine2Falcon1Dovetail_1440	GAGCCTCCATGTTGAACATACCCTTTTCCATTGGCACAGCTGCCGGCATTCACCTGTGCAAGCTTCCAGCTTGCTTATCTATGTCTGTACTCAAAAGAGTAGCTTTTTTCAAGCTACTCTTTGCTAGAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1830:HG4_PB_pbsv_2415:HG2_10X_SVrefine210Xhap12_1831:HG2_PB_pbsv_2402:HG4_PB_SVrefine2PBcRDovetail_1263:HG4_PB_SVrefine2Falcon1Dovetail_1440:HG4_Ill_SVrefine2DISCOVARDovetail_1783:HG3_PB_SVrefine2Falcon1Dovetail_1490:HG2_PB_SVrefine2PBcRplusDovetail_5949:HG2_PB_SVrefine2PB10Xhap12_1829:HG2_PB_SVrefine2Falcon2Bionano_980;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1830:HG4_PB_SVrefine2PBcRDovetail_1263:HG4_PB_SVrefine2Falcon1Dovetail_1440:HG4_Ill_SVrefine2DISCOVARDovetail_1783:HG3_PB_SVrefine2Falcon1Dovetail_1490:HG2_PB_SVrefine2PBcRplusDovetail_5949:HG2_PB_SVrefine2PB10Xhap12_1829:HG2_PB_SVrefine2Falcon2Bionano_980;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0233463;ClusterMaxSizeDiff=0.0233463;ClusterMaxEditDist=0.0314961;PBcalls=8;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-129;DistBack=0;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=258;REFWIDENED=2:160946167-160946553;PctSeqSimilarity=0.9903;PctSizeSimilarity=0.9922;PctRecOverlap=0.2077;SizeDiff=1;StartDistance=-103;EndDistance=-102;GTMatch=0;TruScore=73;MatchId=2042.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:47:0|1:50:0:3:44:0/0:16:0:15:1:0/0:26:1:./.:.:.:.:.:.
chr2	160976805	HG4_Ill_GATKHCSBGrefine_1634	TAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACTTGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGAAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACAAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATTAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1832:HG2_Ill_SpiralSDKrefine_9053:HG4_PB_pbsv_2416:HG2_PB_pbsv_2403:HG4_PB_HySA_3647:HG2_PB_HySA_4564:HG4_PB_SVrefine2PBcRDovetail_1264:HG4_PB_SVrefine2Falcon1Dovetail_1441:HG4_Ill_SVrefine2DISCOVARDovetail_1784:HG4_Ill_MetaSV_2759:HG4_Ill_GATKHCSBGrefine_1634:HG4_10X_allpass_418:HG3_PB_SVrefine2Falcon1Dovetail_1491:HG2_PB_SVrefine2PBcRplusDovetail_5950:HG2_PB_SVrefine2PB10Xhap12_1830:HG2_PB_SVrefine2Falcon1plusDovetail_6423:HG2_Ill_SVrefine2DISCOVARplusDovetail_6998;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1832:HG4_PB_SVrefine2PBcRDovetail_1264:HG4_PB_SVrefine2Falcon1Dovetail_1441:HG4_Ill_SVrefine2DISCOVARDovetail_1784:HG4_Ill_MetaSV_2759:HG4_Ill_GATKHCSBGrefine_1634:HG4_10X_allpass_418:HG3_PB_SVrefine2Falcon1Dovetail_1491:HG2_PB_SVrefine2PBcRplusDovetail_5950:HG2_PB_SVrefine2PB10Xhap12_1830:HG2_PB_SVrefine2Falcon1plusDovetail_6423:HG2_Ill_SVrefine2DISCOVARplusDovetail_6998;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00760456;ClusterMaxSizeDiff=0.00760456;ClusterMaxEditDist=0.0127065;PBcalls=10;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-394;DistBack=8427;DistForward=-364;DistMin=-364;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=404;REFWIDENED=2:160976806-160977603;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2043.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:31:0|1:27:1:1:29:./.:41:0:0:3:0/1:21:19:0/1:34:9:.:.:.
chr2	161168102	HG2_Ill_manta_656	ATTACTTTCCTCTTTACTTGAAGAAGCCAGATAATATAAAAGTATTGCTCTTTTAAAAAGAATACTCAAAAGATCAAACTGCTGAGTTTCAGGCTTG	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_3210:HG4_PB_SVrefine2PBcRDovetail_1265:HG4_PB_HySA_3648:HG3_PB_pbsv_2390:HG4_PB_pbsv_2417:HG3_PB_assemblyticsfalcon_14293:HG3_PB_SVrefine2Falcon1Dovetail_1492:HG2_PB_pbsv_2404:HG2_PB_HySA_4565:HG3_PB_HySA_3723:HG4_PB_assemblyticsfalcon_14068:HG4_PB_SVrefine2Falcon1Dovetail_1442:HG4_Ill_SVrefine2DISCOVARDovetail_1785:HG4_Ill_GATKHCSBGrefine_1635:HG4_Ill_250bpfermikitraw_3250:HG4_10X_allpass_419:HG3_Ill_SVrefine2DISCOVARDovetail_1742:HG3_Ill_GATKHCSBGrefine_1581:HG3_Ill_250bpfermikitraw_3188:HG3_Ill_150bpfermikitraw_3070:HG3_10X_allpass_454:HG2_PB_assemblyticsPBcR_13865:HG2_PB_SVrefine2PBcRplusDovetail_5951:HG2_PB_SVrefine2PB10Xhap12_1832:HG2_PB_SVrefine2Falcon2Bionano_981:HG2_Ill_manta_656:HG2_Ill_SpiralSDKrefine_9054:HG2_Ill_GATKHCSBGrefine_1564;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3210:HG4_PB_assemblyticsfalcon_14068:HG4_PB_SVrefine2Falcon1Dovetail_1442:HG4_Ill_SVrefine2DISCOVARDovetail_1785:HG4_Ill_GATKHCSBGrefine_1635:HG4_Ill_250bpfermikitraw_3250:HG4_10X_allpass_419:HG3_Ill_SVrefine2DISCOVARDovetail_1742:HG3_Ill_GATKHCSBGrefine_1581:HG3_Ill_250bpfermikitraw_3188:HG3_Ill_150bpfermikitraw_3070:HG3_10X_allpass_454:HG2_PB_assemblyticsPBcR_13865:HG2_PB_SVrefine2PBcRplusDovetail_5951:HG2_PB_SVrefine2PB10Xhap12_1832:HG2_PB_SVrefine2Falcon2Bionano_981:HG2_Ill_manta_656:HG2_Ill_SpiralSDKrefine_9054:HG2_Ill_GATKHCSBGrefine_1564;NumExactMatchSVs=19;ClusterMaxShiftDist=0.071066;ClusterMaxSizeDiff=0.071066;ClusterMaxEditDist=0.071066;PBcalls=15;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-96;DistBack=366;DistForward=27348;DistMin=366;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=96;REFWIDENED=2:161168103-161168294;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2044.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:16:49:0|1:16:1:0:44:./.:0:1:23:1:0/1:27:16:./.:.:.:.:.:.
chr2	161795600	HG2_Ill_manta_657	AGAAGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1835:HG4_Ill_Krunchall_3414:HG4_PB_assemblyticsfalcon_14075:HG3_PB_assemblyticsfalcon_14300:HG2_PB_assemblyticsfalcon_14278:HG2_PB_assemblyticsPBcR_13872:HG4_Ill_Spiral_190:HG2_PB_pbsv_2408:HG2_PB_HySA_4570:HG4_Ill_MetaSV_2760:HG3_Ill_MetaSV_2806:HG2_Ill_tnscope_251:HG2_Ill_MetaSV_2666:HG4_PB_pbsv_2419:HG4_PB_SVrefine2PBcRDovetail_1267:HG4_PB_SVrefine2Falcon1Dovetail_1444:HG4_Ill_manta_566:HG4_Ill_SVrefine2DISCOVARDovetail_1786:HG4_Ill_GATKHCSBGrefine_1637:HG4_10X_allpass_420:HG3_PB_pbsv_2392:HG3_PB_SVrefine2PBcRDovetail_1223:HG3_PB_SVrefine2Falcon1Dovetail_1494:HG3_PB_HySA_3732:HG3_Ill_scalpel_2407:HG3_Ill_manta_518:HG3_Ill_SVrefine2DISCOVARDovetail_1747:HG3_Ill_GATKHCSBGrefine_1584:HG3_10X_allpass_455:HG2_PB_SVrefine2PBcRplusDovetail_5954:HG2_PB_SVrefine2PB10Xhap12_1835:HG2_PB_SVrefine2Falcon2Bionano_983:HG2_PB_SVrefine2Falcon1plusDovetail_6426:HG2_Ill_scalpel_2275:HG2_Ill_manta_657:HG2_Ill_breakscan11_322:HG2_Ill_SVrefine2DISCOVARplusDovetail_7002:HG2_Ill_GATKHCSBGrefine_1566:HG2_10X_allpass_362;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1835:HG4_PB_pbsv_2419:HG4_PB_SVrefine2PBcRDovetail_1267:HG4_PB_SVrefine2Falcon1Dovetail_1444:HG4_Ill_manta_566:HG4_Ill_SVrefine2DISCOVARDovetail_1786:HG4_Ill_GATKHCSBGrefine_1637:HG4_10X_allpass_420:HG3_PB_pbsv_2392:HG3_PB_SVrefine2PBcRDovetail_1223:HG3_PB_SVrefine2Falcon1Dovetail_1494:HG3_PB_HySA_3732:HG3_Ill_scalpel_2407:HG3_Ill_manta_518:HG3_Ill_SVrefine2DISCOVARDovetail_1747:HG3_Ill_GATKHCSBGrefine_1584:HG3_10X_allpass_455:HG2_PB_SVrefine2PBcRplusDovetail_5954:HG2_PB_SVrefine2PB10Xhap12_1835:HG2_PB_SVrefine2Falcon2Bionano_983:HG2_PB_SVrefine2Falcon1plusDovetail_6426:HG2_Ill_scalpel_2275:HG2_Ill_manta_657:HG2_Ill_breakscan11_322:HG2_Ill_SVrefine2DISCOVARplusDovetail_7002:HG2_Ill_GATKHCSBGrefine_1566:HG2_10X_allpass_362;NumExactMatchSVs=27;ClusterMaxShiftDist=0.05919;ClusterMaxSizeDiff=0.05919;ClusterMaxEditDist=0.05919;PBcalls=17;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=34454;DistForward=20733;DistMin=20733;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=2:161795601-161795934;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2045.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:./.:0:1:0:5:1/1:0:19:0:17:1/1:0:53:./.:1:14:.:.:.
chr2	162332267	HG4_Ill_SVrefine2DISCOVARDovetail_1791	AGCCATATACAGAAAATTGAAACTGGACTCCTTCCTTACATGTTCTACAAAAATTAACTCACGATGGATTAAAGACTGAAATGTACAACCCAAAGCCATAAAAACCCTAGAAGAAAATCCAGGCAATACCATTCAGGACATAGGCATGGGCAAAGATTTCATGATGAAAACATCAAAAACAATTGCAACAAAAGCAAAAATTGACAAATGAGATCTAATTAAACTAAAAAGCTTCTGCGCAACAAAAGAAACTATCATTAGAGTCAACAGACAACCTACAGAATGGAAGAAAATTTTAGCAACCTGTCCGTCTGACAAAAGTCTAACATCAAGAGTCTACAAGGAACATAAATTTACAAGAATAAAACAAACAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGCCATTTATGAGGCCAAGAAACATAAGAAAAAAACCTCAGCATCACTGATCATTAGAGAAATGCAAATTAAAACCACAGTGAGATACCGTCTCATGCCAGTCAGAATGGCGATTATTAAAAAGTCAAGAAACAGCAGATGTTGGCAAGGCTGCGGAGAGATAGGAACACTTTCACACTGTTGGTGGGAATGCAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCAATTCCCCAAAGACCTAGAACCAGAAATACCATTTGACCCAGCAATCCCAATGGGACTGAACTCGTTTACATTCCCACCAACAGAGTAAAAGTGTTCCTATCTCTCTGCAGCCTCATCAGCATCTGTTGTTTCTTGATTTTTTACCTAAAGGAATATAAATTATTCTATTATAAAGATACATGCATGTGTACGTTAATTGCAGCCCTATTCACAATAGCAAAGACATGGAATCAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAACACTATGCAGCCATAAAAAGGAATGAGATCATGTCCTTTGCAGGGATATGGATGGAGCTGGAAGCCATCATCCTCAGCAAACTAACACAGGAACAGAAAATCAAACATTGCCTGTTCTCACTCATAAGTGGGAGCTGAACAATGAGAACAACAGGGACACTGGGAGGGGAACAACACAGACTGGGTCCTATCGGTAGGGGATGCTGGGAGAGGGAGAGCGTCGGGAAAAATAGCAAATGCATGCTAGGCTATTATACTTAGGTGATAGGTTGATAGGTGCAACAAACCACCATGGCACACATTTACCCATGTAACAATCCTGCACATATACCCCGGAACATAAAATAAAATAACTGAAAAAATTCTGTCTTAATCAGCATATACTATTAATTTGATAAGGAGGAAATTTCTTATCAAATGAATGGTATATGCTTCCTCATCATTCACTCATGAACCACTACAATGTGGCTGTCATCCTCAGTCATGCTATTGAGAGCATTCTTATCATGACCATTAGTAAATTCTTGCTTATGATTTTCAGCTAATCTTTCATGACCTGTCTGTACCATTTGGCAATATTGACCGCTGTTTCCTTCTTGATTTTCAAGATAGTGTATCTTCTCACTACTCTGACTTCTGAATTTTCTTCATGGATTTCTATCTCTTTGTACCTGTTCTGCAGGAATAAAAAATTATATATTTAGTTATCTTCTTTCCTTTAGTAATCTTGGAAGAGCTCACCTATTCTTATGACTTTAGTTTCCACCTTAAAATAGTTCAAGACCTGGCCGGGGGCAGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAG	A	20	PASS	ClusterIDs=HG3_10X_allpass_457:HG3_PB_pbsv_2395:HG4_Ill_Krunchall_3419:HG3_Ill_Krunchall_3277:HG2_Ill_Krunchall_3253:HG4_PB_assemblyticsfalcon_14081:HG3_PB_assemblyticsfalcon_14306:HG2_PB_assemblyticsPBcR_13881:HG2_PB_assemblyticsfalcon_14285:HG2_Ill_tnscope_252:HG4_PB_pbsv_2422:HG4_PB_SVrefine2PBcRDovetail_1269:HG4_PB_SVrefine2Falcon1Dovetail_1447:HG4_Ill_SVrefine2DISCOVARDovetail_1791:HG4_Ill_MetaSV_2762:HG4_Ill_GATKHCSBGrefine_1641:HG4_10X_allpass_421:HG3_PB_SVrefine2PBcRDovetail_1226:HG3_PB_SVrefine2Falcon1Dovetail_1497:HG3_Ill_SVrefine2DISCOVARDovetail_1752:HG3_Ill_MetaSV_2808:HG3_Ill_GATKHCSBGrefine_1587:HG2_PB_pbsv_2411:HG2_PB_SVrefine2PBcRplusDovetail_5958:HG2_PB_SVrefine2PB10Xhap12_1838:HG2_PB_SVrefine2Falcon2Bionano_986:HG2_PB_SVrefine2Falcon1plusDovetail_6429:HG2_Ill_SpiralSDKrefine_9062:HG2_Ill_SVrefine2DISCOVARplusDovetail_7006:HG2_Ill_MetaSV_2668:HG2_Ill_GATKHCSBGrefine_1570:HG2_10X_allpass_363:HG2_10X_SVrefine210Xhap12_1838:HG2_Ill_breakscan11_323;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1838:HG2_10X_allpass_363:HG2_Ill_GATKHCSBGrefine_1570:HG2_Ill_MetaSV_2668:HG2_Ill_SVrefine2DISCOVARplusDovetail_7006:HG2_Ill_SpiralSDKrefine_9062:HG2_PB_SVrefine2Falcon1plusDovetail_6429:HG2_PB_SVrefine2Falcon2Bionano_986:HG2_PB_SVrefine2PB10Xhap12_1838:HG2_PB_SVrefine2PBcRplusDovetail_5958:HG2_PB_pbsv_2411:HG3_Ill_GATKHCSBGrefine_1587:HG3_Ill_MetaSV_2808:HG3_Ill_SVrefine2DISCOVARDovetail_1752:HG3_PB_SVrefine2Falcon1Dovetail_1497:HG3_PB_SVrefine2PBcRDovetail_1226:HG4_10X_allpass_421:HG4_Ill_GATKHCSBGrefine_1641:HG4_Ill_MetaSV_2762:HG4_Ill_SVrefine2DISCOVARDovetail_1791:HG4_PB_SVrefine2Falcon1Dovetail_1447:HG4_PB_SVrefine2PBcRDovetail_1269:HG4_PB_pbsv_2422;NumExactMatchSVs=23;ClusterMaxShiftDist=0.00899888;ClusterMaxSizeDiff=0.00899888;ClusterMaxEditDist=0.00899888;PBcalls=15;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1774;DistBack=11083;DistForward=54648;DistMin=11083;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=2:162332268-162334045;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2046.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:75:./.:0:0:0:0:1/1:0:9:0:8:1/1:0:37:1/1:2:113:1837:.:.
chr2	163666408	HG4_Ill_scalpel_2234	TCTCACCTATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTGGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_156:HG4_PB_assemblyticsfalcon_14085:HG3_PB_assemblyticsfalcon_14310:HG4_Ill_Krunchall_3428:HG2_PB_pbsv_2414:HG4_PB_pbsv_2426:HG2_Ill_breakscan11_324:HG2_Ill_tnscope_253:HG2_Ill_MetaSV_2669:HG4_PB_SVrefine2PBcRDovetail_1272:HG4_PB_SVrefine2Falcon1Dovetail_1449:HG4_Ill_scalpel_2234:HG4_Ill_manta_569:HG4_Ill_SVrefine2DISCOVARDovetail_1797:HG4_Ill_MetaSV_2763:HG4_Ill_GATKHCSBGrefine_1643:HG3_PB_SVrefine2Falcon1Dovetail_1499:HG2_PB_SVrefine2Falcon2Bionano_989:HG2_Ill_scalpel_2279:HG2_Ill_manta_661:HG2_Ill_SVrefine2DISCOVARplusDovetail_7011:HG2_Ill_GATKHCSBGrefine_1572:HG2_10X_SVrefine210Xhap12_1841:HG4_Ill_Spiral_191;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1841:HG2_Ill_GATKHCSBGrefine_1572:HG2_Ill_SVrefine2DISCOVARplusDovetail_7011:HG2_Ill_manta_661:HG2_Ill_scalpel_2279:HG2_PB_SVrefine2Falcon2Bionano_989:HG3_PB_SVrefine2Falcon1Dovetail_1499:HG4_Ill_GATKHCSBGrefine_1643:HG4_Ill_MetaSV_2763:HG4_Ill_SVrefine2DISCOVARDovetail_1797:HG4_Ill_manta_569:HG4_Ill_scalpel_2234:HG4_PB_SVrefine2Falcon1Dovetail_1449:HG4_PB_SVrefine2PBcRDovetail_1272;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0806452;ClusterMaxSizeDiff=0.0806452;ClusterMaxEditDist=0.0806452;PBcalls=8;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=2613;DistForward=-280;DistMin=-280;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:163666409-163666736;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2047.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:26:0|1:43:2:2:23:1|0:0:23:56:0:0/1:27:26:0/1:27:6:.:.:0.388311
chr2	166267508	HG2_PB_SVrefine2Falcon2Bionano_992	TAAAAGCTCCAGACCCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_157:HG2_10X_allpass_364:HG3_PB_HySA_3748:HG2_PB_HySA_4597:HG4_PB_assemblyticsfalcon_14095:HG2_PB_assemblyticsfalcon_14303:HG3_PB_assemblyticsfalcon_14323:HG2_PB_assemblyticsPBcR_13893:HG4_Ill_Krunchall_3437:HG3_Ill_Krunchall_3295:HG2_Ill_Krunchall_3273:HG4_PB_HySA_3676:HG4_Ill_Spiral_192:HG3_Ill_Spiral_2581:HG4_PB_pbsv_2430:HG3_PB_pbsv_2399:HG4_Ill_MetaSV_2765:HG3_Ill_MetaSV_2809:HG2_Ill_tnscope_254:HG2_Ill_MetaSV_2671:HG4_PB_SVrefine2PBcRDovetail_1274:HG4_PB_SVrefine2Falcon1Dovetail_1453:HG4_Ill_manta_570:HG4_Ill_GATKHCSBGrefine_1646:HG4_10X_allpass_422:HG3_PB_SVrefine2PBcRDovetail_1229:HG3_PB_SVrefine2Falcon1Dovetail_1503:HG3_Ill_manta_521:HG3_Ill_SVrefine2DISCOVARDovetail_1762:HG3_Ill_GATKHCSBGrefine_1589:HG3_10X_allpass_459:HG2_PB_pbsv_2417:HG2_PB_SVrefine2PBcRplusDovetail_5962:HG2_PB_SVrefine2Falcon2Bionano_992:HG2_PB_SVrefine2Falcon1plusDovetail_6434:HG2_Ill_manta_662:HG2_Ill_SVrefine2DISCOVARplusDovetail_7019:HG2_Ill_GATKHCSBGrefine_1574:HG2_10X_SVrefine210Xhap12_1847:HG2_Ill_breakscan11_325;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1847:HG2_Ill_GATKHCSBGrefine_1574:HG2_Ill_SVrefine2DISCOVARplusDovetail_7019:HG2_Ill_manta_662:HG2_PB_SVrefine2Falcon1plusDovetail_6434:HG2_PB_SVrefine2Falcon2Bionano_992:HG2_PB_SVrefine2PBcRplusDovetail_5962:HG2_PB_pbsv_2417:HG3_10X_allpass_459:HG3_Ill_GATKHCSBGrefine_1589:HG3_Ill_SVrefine2DISCOVARDovetail_1762:HG3_Ill_manta_521:HG3_PB_SVrefine2Falcon1Dovetail_1503:HG3_PB_SVrefine2PBcRDovetail_1229:HG4_10X_allpass_422:HG4_Ill_GATKHCSBGrefine_1646:HG4_Ill_manta_570:HG4_PB_SVrefine2Falcon1Dovetail_1453:HG4_PB_SVrefine2PBcRDovetail_1274;NumExactMatchSVs=19;ClusterMaxShiftDist=0.123839;ClusterMaxSizeDiff=0.123839;ClusterMaxEditDist=0.123839;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=18255;DistForward=55644;DistMin=18255;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:166267509-166267846;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2048.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:2:24:1:11:1/1:0:15:0:17:1/1:0:42:./.:1:4:.:.:.
chr2	166905634	HG2_10X_allpass_365	TACTTTACAGTGCAAAGTATTTCTTCATTATGAAGAAATGACATTAGATTAGATACAGTGCAAAGATACTTTAGAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1850:HG4_Ill_Spiral_193:HG2_Ill_Spiral_158:HG3_PB_pbsv_2405:HG2_PB_pbsv_2420:HG4_PB_pbsv_2436:HG2_PB_HySA_4603:HG4_Ill_svaba_3035:HG4_Ill_manta_573:HG4_Ill_Krunchall_3444:HG4_Ill_GATKHC_3987:HG4_Ill_GATKHCSBGrefine_1654:HG4_Ill_250bpfermikitraw_3281:HG4_Ill_150bpfermikitraw_3162:HG4_10X_allpass_423:HG3_PB_assemblyticsfalcon_14328:HG3_Ill_svaba_3069:HG3_Ill_manta_525:HG3_Ill_Krunchall_3301:HG3_Ill_GATKHC_4045:HG3_Ill_GATKHCSBGrefine_1594:HG3_Ill_250bpfermikitraw_3217:HG3_Ill_150bpfermikitraw_3104:HG3_10X_allpass_460:HG2_Ill_svaba_2962:HG2_Ill_manta_664:HG2_Ill_SpiralSDKrefine_9078:HG2_Ill_Krunchall_3283:HG2_Ill_GATKHC_3928:HG2_Ill_GATKHCSBGrefine_1580:HG2_Ill_250bpfermikitraw_3242:HG2_Ill_150bpfermikitraw_3003:HG2_10X_allpass_365:HG4_Ill_SVrefine2DISCOVARDovetail_1807:HG2_PB_SVrefine2PBcRplusDovetail_5964:HG2_PB_SVrefine2Falcon2Bionano_995:HG2_Ill_SVrefine2DISCOVARplusDovetail_7023;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_365:HG2_Ill_150bpfermikitraw_3003:HG2_Ill_250bpfermikitraw_3242:HG2_Ill_GATKHCSBGrefine_1580:HG2_Ill_GATKHC_3928:HG2_Ill_Krunchall_3283:HG2_Ill_SpiralSDKrefine_9078:HG2_Ill_manta_664:HG2_Ill_svaba_2962:HG3_10X_allpass_460:HG3_Ill_150bpfermikitraw_3104:HG3_Ill_250bpfermikitraw_3217:HG3_Ill_GATKHCSBGrefine_1594:HG3_Ill_GATKHC_4045:HG3_Ill_Krunchall_3301:HG3_Ill_manta_525:HG3_Ill_svaba_3069:HG3_PB_assemblyticsfalcon_14328:HG4_10X_allpass_423:HG4_Ill_150bpfermikitraw_3162:HG4_Ill_250bpfermikitraw_3281:HG4_Ill_GATKHCSBGrefine_1654:HG4_Ill_GATKHC_3987:HG4_Ill_Krunchall_3444:HG4_Ill_manta_573:HG4_Ill_svaba_3035;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0263158;ClusterMaxSizeDiff=0.0263158;ClusterMaxEditDist=0.0266667;PBcalls=7;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-75;DistBack=16881;DistForward=-43;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=39;REFWIDENED=2:166905629-166905742;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2049.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:50:0|1:34:3:2:46:0|1:39:1:0:13:0/1:28:22:./.:.:.:.:.:.
chr2	167447893	HG2_Ill_GATKHC_3944	TTTCAGAAATTTTCAGCTATTATGTCTGTGAAAATTTTCAGTTCTCCTTTCTCTCTTCTCAACTTCCAGAATTGTAATGGACCACAAAAGTTAGCTCTCTTTTTATACTATGACAGGCCAGTGAGAC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_14316:HG2_Ill_Krunchall_3298:HG2_PB_pbsv_2426:HG4_PB_pbsv_2441:HG3_PB_pbsv_2411:HG4_PB_SVrefine2PBcRDovetail_1278:HG4_PB_SVrefine2Falcon1Dovetail_1457:HG4_Ill_GATKHC_4002:HG4_Ill_GATKHCSBGrefine_1660:HG3_PB_assemblyticsfalcon_14334:HG3_PB_SVrefine2PBcRDovetail_1234:HG3_PB_SVrefine2Falcon1Dovetail_1507:HG3_Ill_SVrefine2DISCOVARDovetail_1775:HG3_Ill_GATKHC_4061:HG3_Ill_GATKHCSBGrefine_1600:HG2_PB_SVrefine2Falcon1plusDovetail_6439:HG2_Ill_manta_666:HG2_Ill_SVrefine2DISCOVARplusDovetail_7029:HG2_Ill_GATKHC_3944:HG2_Ill_GATKHCSBGrefine_1586:HG4_PB_assemblyticsfalcon_14109;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1586:HG2_Ill_GATKHC_3944:HG2_Ill_SVrefine2DISCOVARplusDovetail_7029:HG2_Ill_manta_666:HG2_PB_SVrefine2Falcon1plusDovetail_6439:HG3_Ill_GATKHCSBGrefine_1600:HG3_Ill_GATKHC_4061:HG3_Ill_SVrefine2DISCOVARDovetail_1775:HG3_PB_SVrefine2Falcon1Dovetail_1507:HG3_PB_SVrefine2PBcRDovetail_1234:HG3_PB_assemblyticsfalcon_14334:HG4_Ill_GATKHCSBGrefine_1660:HG4_Ill_GATKHC_4002:HG4_PB_SVrefine2Falcon1Dovetail_1457:HG4_PB_SVrefine2PBcRDovetail_1278;NumExactMatchSVs=15;ClusterMaxShiftDist=0.024;ClusterMaxSizeDiff=0.0239044;ClusterMaxEditDist=0.048;PBcalls=11;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-126;DistBack=47886;DistForward=79257;DistMin=47886;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=128;REFWIDENED=2:167447894-167448147;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2050.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:22:0|1:32:1:2:21:1|0:0:14:38:1:0/1:35:26:./.:.:.:.:.:.
chr2	167546017	HG3_PB_SVrefine2Falcon1Dovetail_1508	TATCCCTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACTGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGAATGCAAGGCTGGTTCAACATATGCAAATCAATAAACGTAATCCATCATATAAACAGAACCAAAGACAAAAACCACACGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAGCCCTTCATGCTAAAAACTCTCAATAAACTAGGTATTGATGGGACATAGCTGAAAATAATAAGAGCTATTTATGGCAAATCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCTTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGACAAGAGAAAGAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTTTCCCTGTTTGCAGATGACATGATTGTATATTTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAACTGATAAGCAACTGCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAAAAACAGACAAACGGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCACAGAGAACAAAACACCTAGGAATCCAACCTACAAGGGATGTGAAGGACCTCCTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGATAGGAATAATCAATATCATGAAAATGGCCATACTGCCTAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAGAAGAGCCCGCATTGCCAAGACAATCCTAAGCCAAAAGAAGAAAGCTGGAGACATCATGCTACCTGACTTCTAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAC	A	20	PASS	ClusterIDs=HG4_10X_allpass_425:HG3_PB_assemblyticsfalcon_14336:HG3_PB_SVrefine2Falcon1Dovetail_1508:HG2_PB_SVrefine2PB10Xhap12_1844:HG2_PB_SVrefine2Falcon1plusDovetail_6440:HG4_PB_HySA_3696:HG2_PB_assemblyticsfalcon_14319:HG4_PB_pbsv_2442:HG2_PB_pbsv_2427:HG4_PB_assemblyticsfalcon_14111:HG4_PB_SVrefine2PBcRDovetail_1279:HG4_PB_SVrefine2Falcon1Dovetail_1458:HG4_Ill_SVrefine2DISCOVARDovetail_1812:HG2_Ill_SVrefine2DISCOVARplusDovetail_7030:HG2_10X_allpass_367:HG2_PB_PB10Xdip_16690:HG4_Ill_MetaSV_2768:HG2_Ill_MetaSV_2672:HG4_Ill_Krunchall_3458:HG2_Ill_Krunchall_3300;NumClusterSVs=20;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6440:HG2_PB_SVrefine2PB10Xhap12_1844:HG3_PB_SVrefine2Falcon1Dovetail_1508:HG3_PB_assemblyticsfalcon_14336;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0712032;ClusterMaxSizeDiff=0.0712032;ClusterMaxEditDist=0.0712032;PBcalls=12;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-1075;DistBack=-21;DistForward=-1051;DistMin=-1051;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:167546017-167547092;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9991;PctRecOverlap=0.9972;SizeDiff=1;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=99;MatchId=2051.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:55:36:0|1:51:1:2:28:1|0:0:18:70:0:./.:50:4:0/1:88:47:1134:.:.
chr2	167550210	HG4_Ill_150bpfermikitraw_3175	CCAGGGTGGGTGTACACCTCCGGCTATATGGGGAGTAATATCATCCTCTCCCTTCCTGGATATTAGAAACAATTTCA	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_14320:HG4_PB_HySA_3697:HG2_PB_HySA_4614:HG4_Ill_manta_575:HG4_Ill_GATKHC_4005:HG4_Ill_GATKHCSBGrefine_1666:HG4_CG_vcfBeta_1596:HG2_Ill_GATKHC_3946:HG2_Ill_GATKHCSBGrefine_1592:HG2_PB_PB10Xdip_16691:HG2_PB_pbsv_2428:HG4_Ill_svaba_3051:HG4_Ill_scalpel_2254:HG4_Ill_Krunchall_3459:HG4_Ill_250bpfermikitraw_3296:HG4_Ill_150bpfermikitraw_3175:HG4_10X_allpass_426:HG2_Ill_svaba_2976:HG2_Ill_Krunchall_3301:HG2_Ill_250bpfermikitraw_3253:HG3_PB_assemblyticsfalcon_14337:HG2_PB_assemblyticsPBcR_13910:HG4_PB_assemblyticsfalcon_14112:HG4_PB_pbsv_2443;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3253:HG2_Ill_Krunchall_3301:HG2_Ill_svaba_2976:HG4_10X_allpass_426:HG4_Ill_150bpfermikitraw_3175:HG4_Ill_250bpfermikitraw_3296:HG4_Ill_Krunchall_3459:HG4_Ill_scalpel_2254:HG4_Ill_svaba_3051;NumExactMatchSVs=9;ClusterMaxShiftDist=0.212766;ClusterMaxSizeDiff=0.212766;ClusterMaxEditDist=0.212766;PBcalls=9;Illcalls=13;TenXcalls=1;CGcalls=1;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=13;NumTechs=4;NumTechsExact=2;SVLEN=-76;DistBack=3117;DistForward=43898;DistMin=3117;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=2:167550209-167550295;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9868;PctRecOverlap=0.8701;SizeDiff=1;StartDistance=-10;EndDistance=-9;GTMatch=0;TruScore=94;MatchId=2052.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:24:0|1:30:4:2:20:1|0:0:38:39:2:0/1:34:20:./.:.:.:1134:.:.
chr2	168732487	HG2_Ill_manta_667	ATATATACACGTATATATATATATACGTATATATATATATACGTATATATATATATACGTATATATATATATATACGTATATATATATATG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_2446:HG4_PB_SVrefine2PBcRDovetail_1282:HG2_PB_assemblyticsPBcR_13914:HG2_PB_SVrefine2Falcon2Bionano_997:HG4_Ill_SVrefine2DISCOVARDovetail_1814:HG2_PB_SVrefine2Falcon1plusDovetail_6443:HG2_PB_assemblyticsfalcon_14329:HG2_10X_SVrefine210Xhap12_1857:HG2_Ill_SpiralSDKrefine_9092:HG2_PB_HySA_4620:HG4_Ill_svaba_3055:HG4_Ill_GATKHC_4012:HG4_Ill_scalpel_2255:HG2_Ill_manta_667:HG2_PB_pbsv_2431:HG4_PB_SVrefine2Falcon1Dovetail_1460:HG4_PB_HySA_3702;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_manta_667:HG4_Ill_scalpel_2255:HG4_Ill_svaba_3055;NumExactMatchSVs=3;ClusterMaxShiftDist=0.380952;ClusterMaxSizeDiff=0.380952;ClusterMaxEditDist=0.380952;PBcalls=10;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=-90;DistBack=130916;DistForward=-52;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=77;REFWIDENED=2:168732474-168732640;PctSeqSimilarity=0.8814;PctSizeSimilarity=0.8654;PctRecOverlap=0.8476;SizeDiff=-14;StartDistance=-2;EndDistance=-16;GTMatch=0;TruScore=86;MatchId=2053.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:66:0|1:39:0:1:60:./.:0:3:5:0:0/1:12:5:./.:.:.:.:.:.
chr2	168895806	HG2_Ill_manta_668	GAAAAAAGCAGATCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCCAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_326:HG4_Ill_Krunchall_3465:HG3_Ill_Krunchall_3324:HG2_Ill_Krunchall_3307:HG4_PB_assemblyticsfalcon_14121:HG2_PB_assemblyticsfalcon_14330:HG2_PB_HySA_4621:HG4_Ill_Krunchall_3464:HG3_PB_assemblyticsfalcon_14342:HG2_PB_assemblyticsPBcR_13916:HG3_PB_pbsv_2416:HG2_PB_pbsv_2432:HG3_PB_HySA_3771:HG4_Ill_MetaSV_2769:HG3_Ill_MetaSV_2814:HG2_Ill_tnscope_255:HG2_Ill_MetaSV_2673:HG4_PB_pbsv_2447:HG4_PB_SVrefine2PBcRDovetail_1283:HG4_PB_SVrefine2Falcon1Dovetail_1461:HG4_Ill_manta_577:HG4_Ill_GATKHCSBGrefine_1672:HG4_10X_allpass_427:HG3_PB_SVrefine2PBcRDovetail_1238:HG3_PB_SVrefine2Falcon1Dovetail_1511:HG3_Ill_manta_529:HG3_Ill_SVrefine2DISCOVARDovetail_1780:HG3_Ill_GATKHCSBGrefine_1605:HG3_10X_allpass_463:HG2_PB_SVrefine2PBcRplusDovetail_5970:HG2_PB_SVrefine2PB10Xhap12_1846:HG2_PB_SVrefine2Falcon2Bionano_998:HG2_PB_SVrefine2Falcon1plusDovetail_6444:HG2_Ill_scalpel_2314:HG2_Ill_manta_668:HG2_Ill_SVrefine2DISCOVARplusDovetail_7034:HG2_Ill_GATKHCSBGrefine_1594:HG2_10X_allpass_368:HG2_10X_SVrefine210Xhap12_1858;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1858:HG2_10X_allpass_368:HG2_Ill_GATKHCSBGrefine_1594:HG2_Ill_SVrefine2DISCOVARplusDovetail_7034:HG2_Ill_manta_668:HG2_Ill_scalpel_2314:HG2_PB_SVrefine2Falcon1plusDovetail_6444:HG2_PB_SVrefine2Falcon2Bionano_998:HG2_PB_SVrefine2PB10Xhap12_1846:HG2_PB_SVrefine2PBcRplusDovetail_5970:HG3_10X_allpass_463:HG3_Ill_GATKHCSBGrefine_1605:HG3_Ill_SVrefine2DISCOVARDovetail_1780:HG3_Ill_manta_529:HG3_PB_SVrefine2Falcon1Dovetail_1511:HG3_PB_SVrefine2PBcRDovetail_1238:HG4_10X_allpass_427:HG4_Ill_GATKHCSBGrefine_1672:HG4_Ill_manta_577:HG4_PB_SVrefine2Falcon1Dovetail_1461:HG4_PB_SVrefine2PBcRDovetail_1283:HG4_PB_pbsv_2447;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0953895;ClusterMaxSizeDiff=0.0953895;ClusterMaxEditDist=0.0953895;PBcalls=17;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=20757;DistForward=8495;DistMin=8495;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:168895807-168896141;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2054.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:0:14:1:37:1/1:0:17:0:19:1/1:0:63:./.:1:12:.:.:.
chr2	169395462	HG4_Ill_manta_579	GGAAAATATTGTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTCTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_256:HG4_Ill_Krunchall_3467:HG2_Ill_Krunchall_3313:HG4_PB_assemblyticsfalcon_14125:HG2_PB_assemblyticsfalcon_14335:HG3_PB_assemblyticsfalcon_14347:HG2_PB_assemblyticsPBcR_13920:HG2_PB_HySA_4627:HG3_PB_pbsv_2419:HG3_PB_HySA_3778:HG4_PB_pbsv_2449:HG4_PB_SVrefine2PBcRDovetail_1285:HG4_PB_SVrefine2Falcon1Dovetail_1464:HG4_Ill_scalpel_2260:HG4_Ill_manta_579:HG4_Ill_SVrefine2DISCOVARDovetail_1815:HG4_Ill_GATKHCSBGrefine_1674:HG4_10X_allpass_429:HG3_PB_SVrefine2PBcRDovetail_1240:HG3_PB_SVrefine2Falcon1Dovetail_1513:HG3_Ill_scalpel_2447:HG3_Ill_manta_531:HG3_Ill_SVrefine2DISCOVARDovetail_1781:HG3_Ill_GATKHCSBGrefine_1607:HG3_10X_allpass_464:HG2_PB_pbsv_2434:HG2_PB_SVrefine2PBcRplusDovetail_5972:HG2_PB_SVrefine2PB10Xhap12_1848:HG2_PB_SVrefine2Falcon2Bionano_999:HG2_PB_SVrefine2Falcon1plusDovetail_6446:HG2_Ill_scalpel_2320:HG2_Ill_manta_669:HG2_Ill_SVrefine2DISCOVARplusDovetail_7038:HG2_Ill_MetaSV_2674:HG2_Ill_GATKHCSBGrefine_1595:HG2_10X_allpass_369:HG2_10X_SVrefine210Xhap12_1859:HG4_Ill_MetaSV_2770:HG3_Ill_MetaSV_2815;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1859:HG2_10X_allpass_369:HG2_Ill_GATKHCSBGrefine_1595:HG2_Ill_MetaSV_2674:HG2_Ill_SVrefine2DISCOVARplusDovetail_7038:HG2_Ill_manta_669:HG2_Ill_scalpel_2320:HG2_PB_SVrefine2Falcon1plusDovetail_6446:HG2_PB_SVrefine2Falcon2Bionano_999:HG2_PB_SVrefine2PB10Xhap12_1848:HG2_PB_SVrefine2PBcRplusDovetail_5972:HG2_PB_pbsv_2434:HG3_10X_allpass_464:HG3_Ill_GATKHCSBGrefine_1607:HG3_Ill_SVrefine2DISCOVARDovetail_1781:HG3_Ill_manta_531:HG3_Ill_scalpel_2447:HG3_PB_SVrefine2Falcon1Dovetail_1513:HG3_PB_SVrefine2PBcRDovetail_1240:HG4_10X_allpass_429:HG4_Ill_GATKHCSBGrefine_1674:HG4_Ill_SVrefine2DISCOVARDovetail_1815:HG4_Ill_manta_579:HG4_Ill_scalpel_2260:HG4_PB_SVrefine2Falcon1Dovetail_1464:HG4_PB_SVrefine2PBcRDovetail_1285:HG4_PB_pbsv_2449;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0947712;ClusterMaxSizeDiff=0.0947712;ClusterMaxEditDist=0.0947712;PBcalls=17;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=10299;DistForward=8218;DistMin=8218;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:169395463-169395789;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2055.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:62:1/1:1:25:1:26:1/1:0:23:0:24:1/1:0:55:./.:2:12:.:.:.
chr2	169403993	HG2_10X_SVrefine210Xhap12_1860	AATCCTACCAACACTTTATTGGGATAATTGAGTAATGTGTAACTGGTGGCATTAAGAATCAC	A	20	PASS	ClusterIDs=HG3_Ill_Spiral_2608:HG3_PB_pbsv_2420:HG3_PB_assemblyticsfalcon_14348:HG3_PB_SVrefine2PBcRDovetail_1241:HG3_Ill_svaba_3092:HG3_Ill_manta_532:HG3_Ill_SVrefine2DISCOVARDovetail_1782:HG3_Ill_Krunchall_3329:HG3_Ill_GATKHC_4076:HG3_Ill_GATKHCSBGrefine_1608:HG3_Ill_Cortex_1979:HG3_Ill_250bpfermikitraw_3242:HG3_Ill_150bpfermikitraw_3126:HG3_10X_allpass_465:HG2_PB_pbsv_2435:HG2_Ill_svaba_2983:HG2_Ill_scalpel_2321:HG2_Ill_manta_670:HG2_Ill_breakscan11_327:HG2_Ill_SpiralSDKrefine_9096:HG2_Ill_SVrefine2DISCOVARplusDovetail_7039:HG2_Ill_Krunchall_3314:HG2_Ill_GATKHC_3959:HG2_Ill_GATKHCSBGrefine_1596:HG2_Ill_Cortex_4569:HG2_Ill_250bpfermikitraw_3267:HG2_Ill_150bpfermikitraw_3026:HG2_10X_allpass_370:HG2_10X_SVrefine210Xhap12_1860:HG3_PB_HySA_3779;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1860:HG2_10X_allpass_370:HG2_Ill_150bpfermikitraw_3026:HG2_Ill_250bpfermikitraw_3267:HG2_Ill_Cortex_4569:HG2_Ill_GATKHCSBGrefine_1596:HG2_Ill_GATKHC_3959:HG2_Ill_Krunchall_3314:HG2_Ill_SVrefine2DISCOVARplusDovetail_7039:HG2_Ill_SpiralSDKrefine_9096:HG2_Ill_breakscan11_327:HG2_Ill_manta_670:HG2_Ill_scalpel_2321:HG2_Ill_svaba_2983:HG2_PB_pbsv_2435:HG3_10X_allpass_465:HG3_Ill_150bpfermikitraw_3126:HG3_Ill_250bpfermikitraw_3242:HG3_Ill_Cortex_1979:HG3_Ill_GATKHCSBGrefine_1608:HG3_Ill_GATKHC_4076:HG3_Ill_Krunchall_3329:HG3_Ill_SVrefine2DISCOVARDovetail_1782:HG3_Ill_manta_532:HG3_Ill_svaba_3092:HG3_PB_SVrefine2PBcRDovetail_1241:HG3_PB_assemblyticsfalcon_14348:HG3_PB_pbsv_2420;NumExactMatchSVs=28;ClusterMaxShiftDist=0.016;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.016;PBcalls=5;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=21;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=15;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-61;DistBack=8218;DistForward=4292;DistMin=4292;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:169403994-169404056;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2056.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:./.:17:12:6:14:0|1:49:0:0:28:0/1:36:34:./.:.:.:.:.:.
chr2	169606131	HG4_Ill_svaba_3060	AGAATATGGTAGCGTGCGCTACCATGCCTAGCTAATTTTTTATTTTTTGTAGAGACGGGGTCTTGCTGTGATACCTC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1861:HG4_Ill_Krunchall_3472:HG2_PB_assemblyticsPBcR_13924:HG3_PB_HySA_3782:HG4_PB_pbsv_2451:HG4_Ill_svaba_3060:HG4_Ill_scalpel_2263:HG4_Ill_manta_580:HG4_Ill_Krunchall_3471:HG4_Ill_GATKHC_4018:HG4_Ill_GATKHCSBGrefine_1676:HG4_Ill_250bpfermikitraw_3307:HG4_Ill_150bpfermikitraw_3183:HG4_CG_vcfBeta_1604:HG4_10X_allpass_430:HG3_PB_pbsv_2421:HG3_Ill_svaba_3095:HG3_Ill_manta_533:HG3_Ill_Krunchall_3333:HG3_Ill_GATKHC_4080:HG3_Ill_GATKHCSBGrefine_1610:HG3_Ill_250bpfermikitraw_3246:HG3_CG_vcfBeta_1378:HG3_10X_allpass_466:HG2_PB_pbsv_2437:HG2_PB_SVrefine2PBcRplusDovetail_5973:HG2_Ill_svaba_2986:HG2_Ill_breakscan11_328:HG2_Ill_SpiralSDKrefine_9098:HG2_Ill_Krunchall_3318:HG2_Ill_GATKHC_3963:HG2_Ill_GATKHCSBGrefine_1598:HG2_Ill_250bpfermikitraw_3271:HG2_Ill_150bpfermikitraw_3029:HG2_CG_vcfBeta_1474:HG2_10X_allpass_371;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1861:HG4_PB_pbsv_2451:HG4_Ill_svaba_3060:HG4_Ill_scalpel_2263:HG4_Ill_manta_580:HG4_Ill_Krunchall_3471:HG4_Ill_GATKHC_4018:HG4_Ill_GATKHCSBGrefine_1676:HG4_Ill_250bpfermikitraw_3307:HG4_Ill_150bpfermikitraw_3183:HG4_CG_vcfBeta_1604:HG4_10X_allpass_430:HG3_PB_pbsv_2421:HG3_Ill_svaba_3095:HG3_Ill_manta_533:HG3_Ill_Krunchall_3333:HG3_Ill_GATKHC_4080:HG3_Ill_GATKHCSBGrefine_1610:HG3_Ill_250bpfermikitraw_3246:HG3_CG_vcfBeta_1378:HG3_10X_allpass_466:HG2_PB_pbsv_2437:HG2_PB_SVrefine2PBcRplusDovetail_5973:HG2_Ill_svaba_2986:HG2_Ill_breakscan11_328:HG2_Ill_SpiralSDKrefine_9098:HG2_Ill_Krunchall_3318:HG2_Ill_GATKHC_3963:HG2_Ill_GATKHCSBGrefine_1598:HG2_Ill_250bpfermikitraw_3271:HG2_Ill_150bpfermikitraw_3029:HG2_CG_vcfBeta_1474:HG2_10X_allpass_371;NumExactMatchSVs=33;ClusterMaxShiftDist=0.038961;ClusterMaxSizeDiff=0.038961;ClusterMaxEditDist=0.038961;PBcalls=6;Illcalls=23;TenXcalls=4;CGcalls=3;PBexactcalls=4;Illexactcalls=22;TenXexactcalls=4;CGexactcalls=3;HG2count=14;HG3count=10;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-76;DistBack=-77;DistForward=-65;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:169606132-169606209;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2057.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:40:0|1:41:0:1:36:1|0:0:21:29:0:0/1:32:22:./.:.:.:.:.:.
chr2	170431655	HG2_Ill_GATKHC_3985	CCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGGCAGGTCGGCTGGCCGGGCGGGGGGCTGACCGCCCCCACCTCCCTCCCGGGCGGGGCGGCTGGCTGGGCGGGGAGCTGACCG	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_14349:HG3_PB_pbsv_2429:HG4_PB_SVrefine2Falcon1Dovetail_1468:HG3_Ill_GATKHC_4101:HG3_Ill_GATKHCSBGrefine_1619:HG2_PB_pbsv_2444:HG2_PB_assemblyticsPBcR_13938:HG2_PB_SVrefine2PBcRplusDovetail_5977:HG2_PB_SVrefine2PB10Xhap12_1852:HG2_PB_SVrefine2Falcon1plusDovetail_6451:HG2_Ill_GATKHC_3985:HG2_Ill_GATKHCSBGrefine_1601:HG2_10X_allpass_372:HG3_PB_SVrefine2PBcRDovetail_1245:HG3_Ill_MetaSV_2817:HG4_PB_assemblyticsfalcon_14145;NumClusterSVs=16;ExactMatchIDs=HG2_10X_allpass_372:HG2_Ill_GATKHCSBGrefine_1601:HG2_Ill_GATKHC_3985:HG2_PB_SVrefine2Falcon1plusDovetail_6451:HG2_PB_SVrefine2PB10Xhap12_1852:HG2_PB_SVrefine2PBcRplusDovetail_5977:HG2_PB_assemblyticsPBcR_13938:HG2_PB_pbsv_2444:HG3_Ill_GATKHCSBGrefine_1619:HG3_Ill_GATKHC_4101:HG4_PB_SVrefine2Falcon1Dovetail_1468;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0133333;ClusterMaxSizeDiff=0.0133333;ClusterMaxEditDist=0.0133779;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-149;DistBack=-156;DistForward=21710;DistMin=-156;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=157;REFWIDENED=2:170431612-170431917;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2058.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:42:./.:27:10:3:27:./.:11:2:0:4:0/1:35:13:./.:.:.:.:.:.
chr2	170641507	HG4_Ill_GATKHCSBGrefine_1690	CTCATTATTTTCTTTTTTTTTTTTTTTTTTTTTTTAAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGTGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCACCTCCCTCGCGGATGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCGACCTCCCTCGCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAAAAGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCATCACCTCCCGGACCGGGCGGCTGGCCGGGCGGGGGGCATGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCTGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGAAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGTGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTGCTCACTTCCCAGACTGGGCGGCTGGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGTGGCTGGGAGGTGGAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGTTGGCGGATCACTCGCGGTTAGGGGCTGGAGACCGGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAACCAGTCAGGCGTGGCGGCGCGTGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGCTCCGCATGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGAGGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_2462:HG2_10X_allpass_373:HG3_PB_pbsv_2431:HG3_10X_allpass_468:HG2_PB_HySA_4652:HG2_Ill_Krunchall_3333:HG4_Ill_Krunchall_3491:HG4_PB_assemblyticsfalcon_14150:HG2_PB_assemblyticsfalcon_14353:HG4_10X_allpass_432:HG4_Ill_Krunchall_3490:HG3_PB_assemblyticsfalcon_14368:HG2_PB_assemblyticsPBcR_13942:HG4_Ill_Krunchall_3489:HG2_Ill_tnscope_257:HG4_PB_SVrefine2PBcRDovetail_1289:HG4_PB_SVrefine2Falcon1Dovetail_1470:HG4_Ill_SVrefine2DISCOVARDovetail_1819:HG4_Ill_MetaSV_2771:HG4_Ill_GATKHCSBGrefine_1690:HG3_PB_SVrefine2PBcRDovetail_1247:HG3_PB_SVrefine2Falcon1Dovetail_1518:HG3_Ill_SVrefine2DISCOVARDovetail_1788:HG3_Ill_MetaSV_2818:HG3_Ill_GATKHCSBGrefine_1621:HG2_PB_pbsv_2447:HG2_PB_SVrefine2PBcRplusDovetail_5980:HG2_PB_SVrefine2PB10Xhap12_1855:HG2_PB_SVrefine2Falcon2Bionano_1005:HG2_PB_SVrefine2Falcon1plusDovetail_6454:HG2_Ill_SVrefine2DISCOVARplusDovetail_7044:HG2_Ill_MetaSV_2675:HG2_Ill_GATKHCSBGrefine_1603:HG2_10X_SVrefine210Xhap12_1866;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1866:HG2_Ill_GATKHCSBGrefine_1603:HG2_Ill_MetaSV_2675:HG2_Ill_SVrefine2DISCOVARplusDovetail_7044:HG2_PB_SVrefine2Falcon1plusDovetail_6454:HG2_PB_SVrefine2Falcon2Bionano_1005:HG2_PB_SVrefine2PB10Xhap12_1855:HG2_PB_SVrefine2PBcRplusDovetail_5980:HG2_PB_pbsv_2447:HG3_Ill_GATKHCSBGrefine_1621:HG3_Ill_MetaSV_2818:HG3_Ill_SVrefine2DISCOVARDovetail_1788:HG3_PB_SVrefine2Falcon1Dovetail_1518:HG3_PB_SVrefine2PBcRDovetail_1247:HG4_Ill_GATKHCSBGrefine_1690:HG4_Ill_MetaSV_2771:HG4_Ill_SVrefine2DISCOVARDovetail_1819:HG4_PB_SVrefine2Falcon1Dovetail_1470:HG4_PB_SVrefine2PBcRDovetail_1289;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00860832;ClusterMaxSizeDiff=0.00860832;ClusterMaxEditDist=0.00860832;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-2444;DistBack=31793;DistForward=9547;DistMin=9547;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=2:170641508-170643962;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2059.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:85:1/1:1:27:0:31:1/1:0:24:0:28:1/1:0:23:1/1:2:167:2579:.:.
chr2	170992012	HG2_PB_SVrefine2PBcRplusDovetail_5982	AGAAAAACAATCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGCGCTATCCCGGCTCACTGCAAGTTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCAGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_329:HG4_PB_assemblyticsfalcon_14153:HG2_PB_assemblyticsfalcon_14357:HG4_Ill_Krunchall_3497:HG2_Ill_Krunchall_3336:HG3_PB_assemblyticsfalcon_14372:HG2_PB_assemblyticsPBcR_13946:HG4_PB_pbsv_2463:HG2_PB_pbsv_2449:HG3_PB_HySA_3803:HG4_Ill_MetaSV_2772:HG2_Ill_tnscope_258:HG2_Ill_MetaSV_2677:HG4_PB_SVrefine2PBcRDovetail_1290:HG4_Ill_svaba_3088:HG4_Ill_scalpel_2278:HG4_Ill_manta_582:HG4_Ill_SVrefine2DISCOVARDovetail_1822:HG4_Ill_GATKHCSBGrefine_1692:HG4_10X_allpass_433:HG3_PB_pbsv_2433:HG3_PB_SVrefine2PBcRDovetail_1249:HG3_PB_SVrefine2Falcon1Dovetail_1519:HG3_Ill_svaba_3116:HG3_Ill_scalpel_2462:HG3_Ill_manta_535:HG3_Ill_MetaSV_2820:HG3_Ill_GATKHCSBGrefine_1623:HG2_PB_SVrefine2PBcRplusDovetail_5982:HG2_PB_SVrefine2Falcon2Bionano_1006:HG2_PB_SVrefine2Falcon1plusDovetail_6455:HG2_PB_HySA_4656:HG2_Ill_svaba_3008:HG2_Ill_scalpel_2337:HG2_Ill_manta_672:HG2_Ill_SVrefine2DISCOVARplusDovetail_7047:HG2_Ill_GATKHCSBGrefine_1606:HG2_10X_allpass_374:HG2_10X_SVrefine210Xhap12_1867;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1867:HG2_10X_allpass_374:HG2_Ill_GATKHCSBGrefine_1606:HG2_Ill_SVrefine2DISCOVARplusDovetail_7047:HG2_Ill_manta_672:HG2_Ill_scalpel_2337:HG2_Ill_svaba_3008:HG2_PB_HySA_4656:HG2_PB_SVrefine2Falcon1plusDovetail_6455:HG2_PB_SVrefine2Falcon2Bionano_1006:HG2_PB_SVrefine2PBcRplusDovetail_5982:HG3_Ill_GATKHCSBGrefine_1623:HG3_Ill_MetaSV_2820:HG3_Ill_manta_535:HG3_Ill_scalpel_2462:HG3_Ill_svaba_3116:HG3_PB_SVrefine2Falcon1Dovetail_1519:HG3_PB_SVrefine2PBcRDovetail_1249:HG3_PB_pbsv_2433:HG4_10X_allpass_433:HG4_Ill_GATKHCSBGrefine_1692:HG4_Ill_SVrefine2DISCOVARDovetail_1822:HG4_Ill_manta_582:HG4_Ill_scalpel_2278:HG4_Ill_svaba_3088:HG4_PB_SVrefine2PBcRDovetail_1290;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0822368;ClusterMaxSizeDiff=0.0822368;ClusterMaxEditDist=0.0822368;PBcalls=15;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=10;DistForward=-297;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:170992013-170992334;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2060.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:88:1/1:9:31:1:32:./.:1:17:0:24:1/1:0:47:./.:2:10:.:.:.
chr2	171339879	HG2_Ill_scalpel_2341	GGGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTAGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAATAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_2465:HG2_PB_assemblyticsfalcon_14361:HG2_PB_assemblyticsPBcR_13949:HG4_Ill_Krunchall_3500:HG2_PB_HySA_4659:HG2_Ill_Krunchall_3339:HG4_Ill_scalpel_2280:HG4_Ill_manta_583:HG4_Ill_MetaSV_2773:HG4_Ill_GATKHCSBGrefine_1694:HG2_PB_pbsv_2451:HG2_PB_SVrefine2PBcRplusDovetail_5984:HG2_PB_SVrefine2PB10Xhap12_1858:HG2_PB_SVrefine2Falcon1plusDovetail_6457:HG2_Ill_scalpel_2341:HG2_Ill_manta_673:HG2_Ill_GATKHCSBGrefine_1608:HG2_10X_SVrefine210Xhap12_1868:HG2_Ill_tnscope_259:HG2_Ill_MetaSV_2678:HG2_Ill_breakscan11_330;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1868:HG2_Ill_GATKHCSBGrefine_1608:HG2_Ill_manta_673:HG2_Ill_scalpel_2341:HG2_PB_SVrefine2Falcon1plusDovetail_6457:HG2_PB_SVrefine2PB10Xhap12_1858:HG2_PB_SVrefine2PBcRplusDovetail_5984:HG2_PB_pbsv_2451:HG4_Ill_GATKHCSBGrefine_1694:HG4_Ill_MetaSV_2773:HG4_Ill_manta_583:HG4_Ill_scalpel_2280;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0618182;ClusterMaxSizeDiff=0.0618182;ClusterMaxEditDist=0.0692168;PBcalls=8;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-278;DistBack=10257;DistForward=27021;DistMin=10257;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=2:171339880-171340166;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2061.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:./.:19:29:8:3:1|0:0:18:30:0:0/1:22:22:./.:.:.:.:.:.
chr2	173004248	HG2_Ill_SpiralSDKrefine_9127	TGTAGAGATGGGGTTTGGCCACGTTTCCCAGGCTGGTCTGGAACTCCTGGGCTCAAGTGATTCTCCTACTTCAGTGTCCCAAAGTGTTGGGATTACCGCTATGAGCCACCACGCTTGATCATATCTCTCATCTTAAATCAAAAGCTAGAAATGTTTAAGCTTAGTGAGGAAAGCACGTTGAAAGTCAAGACAGGCTAAAAGCTAGGCCTCTTGCACAAAACTCTTAGCCAAGTTGTGAATGCAAAGGAAAAGTTCTTGAAGGAAATTAAACGTGCTACTCTAGTGAACACATTTCACTTTTTGTTGACATGGAGGAGGTTTGAATGATCTGGGTAGAAGATCAAACCAGCCACAACCTTCCCTTAAGCCAAAGCCTAATCCAGAGAGTTCAGACTCTGAACTCTCTTCAAGTCTATGAAGGCTGAGAGAGATGAGGAAGCTGCAGAAGAAATGTTGGAAGCCAGCAGAGGTTGGTTCATGAGCTTTAAGGAAAGAAGCTGTCTCCATAACATAAAAGTGCAAGGTGAAGTGGCAAGTGCTGATGTAGAAGCTACAGCAAGTTATTCAGAAGATCTAGCTAAGACCATCGATGAAGGTGACTGCATGAAACAAAAGCTTTTCCATGTAGATGAAACAGCCTTGGAAGAAGATGCCATCTAGGACTTTCACAGCTAAAGAAGAGAAGAGAATGCCTGGCTCCAAAGCTTCAAAGGACAGGCTCTCTTGTTAGGGGCTAATGCAGCTGGTGACTCTAAGTTGAAGCTAATGTTCATTGACCATTCTGAAAATCCTAGGGCCCTTAAGAATTATGGTAAATCTGCTCTACCCATGCTCTATAAATGGAACAACAAAGCCTGGATGACAGCACATCTGTCTAGAATATGGTTTACTGAATACTTTAAGCTCAATGTTGAGACCTACTGTTTAGAAAAAAAGATTCCTTTCAAAATACTATTGCTCATTGACAATGTACCTGGTCACCAAACAGCTCTCTGATGGAGAGGTACAAGGAAATTAATGTTTTCTTGCCTGCTAACACAACATCCATTCTGCAGCCCATGGATCAAGGAGTAATTTTGACTTTCAAGTCTTATTATCTATTTATTCATTTGTTTAGAGAGGTAGTCTCATTCTGTCACCCAGGCTGGAGTGCACTGGCAATCACAGCTTACTGCAGCCTTGAACTCTGGGATCCAGTGATCCTCCTGCTCCAGCCTCCCAAGTAGCTGAGACTATAGGCATATTCTACCACACCTAGCTAATTTTTTTTTTTTTTTTTTTTTTGAGTTGAGGTCTCTGCTGCCCAGGCTGGAGAGCAGTGGCACAATTATGGCTTACTATGGCCTCAAACTCTGGGCTCAAGTGATCCCCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCATGTACCACCACTCTTGAGTAAGTTTTTCTATTTTTTGTAGAGACAAATTTCACTGTGTTGGCTGGTCTGGTCTAGAACTCCTGGCCTTAAACAATCTCCCTGCCTTAGCCTCCCGAAGTGCTGGGATTACAGGTATAAGGCACCACCCTTGGCAACCCTTATTTAAAAAATATATTTGCAGCCAGGCTTGGTGGCTTGTGCCTATAATCCCAGAGACTCAGGAGGCTGAAGTGGGAGGATTGCTTGAGGCCAGGAGTGTAAGACCAGCCTGGGTAACATAGCAAGACCCAGTCCCTAAAAACAAAAATTTACAACAAAAGAAATACCTATCATAAGACTATAGCTGCCATAGATAGTGATTCCTTTGATGTATCTGGGCAAAGTAAATTGAAAACTTTCTGGAAAGGATTTACCATTCTAGATGCCATTAAGAACATTTGTGATTCATAGGAGGAGGTCAAAACATCAACATTAACAGGGGTTTGGGAGAAGTTGATTCCAGTGCTTATTGATGACTTTTGAGACGTTCAAGGCTTCACTGCAGCTGTGGTGGAAATAGCAAGAGAACTAGAATTAGAAGTAGAGCCTGTAGATGTGACTCAATTCCTGCAATTTCATGATCAAACTTGACTGGATGAGGAGTTGCTCCTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCATTCTTGTCGCCCAAGCTGGAGTACAGTGGCACAATCTTGGCTCACTGCAATCTCCTGGGTTCAAGCGATTCTCTTGCCTCAGCCTCCCGAGTAGCTGAGATTACATGTGCCCACCACCATGCCCCAGCCAACTTTTGTATTTTTAGTAGAGATAGGGTTTCACCATGTTGGCCAGCCTGGTCTTGAGCTCCTGACTTCAAGTGATCTGCCTGCCTCAGCCTCCTAAAGTGCTGGGATTACAGGCGTAAGCCACCGCGCCTGGCCCCTGACAACTTTAATTAGGCTTCTGGATCCCTGTTGTATAAAAGTGTGAAGGCTGTAGAGGTGCTCTTCTGTGACACACCCCTATCCTGGCTTCCCTTACAGAATTCCTCAAATTCAAAACCAGCTGCACTCTCTGCTTTCCATTTCCAAAGCCTTTCTACCTGCAGCAATTGTTGAGAGCAGAGGGAGGAGGATGGGCTGTGTGCCTGTTTTTTTTTGTTTTTTGTTTTTTTTTTTTAACTAGGGCAAAGTCTCTTACCTAAATCAGTAGAGCAGCTTCAAATGTGCAGTTTTGCACACCCCTCTGCATGATCCAGAACCCTCCCGGTGCGCTGCTGCCTCAGAACCTTTGCTTGCAGTATTGCCATGCTCTTCCTCCAGAGAGCGGCCTCCCCACTCCTTCACTTCTCAGTTCTTTACTCAAATATACCTCAGAGAGGTCTCCCAGACAGGATGTTGGCTATGTACCACACATTTCCTATCCCCTTCCCTGATTTATTTTCATTGTTAGCAGTTTGTACATAGTAAATATACCTTTTGCTTATTTCTCTTATTTATTTTCTGTCTTCCCAAACCAAATATAGGCAGAGATTTTTGTGCCAGTGTCTGATATACAAAAGATACTCTATAAATACATCTTGAATGAATGAATGAATAAATATCAAGCACATGTACAATTATATAGTACATATTTATTTGTATAATCTTTTTTCTTTTGGATACGTCGTCTCGCTCTGTCACCCAGGCTGGATTGCAATGGTGCGATCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCCCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACATGCCACCATGCCTGGCTAATTTTTGTATTTTTA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7054:HG3_PB_pbsv_2443:HG2_10X_allpass_375:HG2_PB_assemblyticsPBcR_13961:HG2_PB_pbsv_2459:HG3_PB_SVrefine2PBcRDovetail_1254:HG3_Ill_MetaSV_2821:HG2_PB_HySA_4674:HG2_Ill_SpiralSDKrefine_9127:HG2_Ill_tnscope_260:HG2_Ill_MetaSV_2679:HG2_PB_SVrefine2PBcRplusDovetail_5986;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SpiralSDKrefine_9127:HG2_PB_HySA_4674:HG3_Ill_MetaSV_2821:HG3_PB_SVrefine2PBcRDovetail_1254;NumExactMatchSVs=4;ClusterMaxShiftDist=0.130043;ClusterMaxSizeDiff=0.130043;ClusterMaxEditDist=0.130043;PBcalls=6;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-3232;DistBack=11554;DistForward=3508;DistMin=3508;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=189;REFWIDENED=2:173004104-173007524;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2062.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:54:34:0|1:52:2:0:21:0|1:34:0:0:23:0/1:55:7:0/1:256:114:3156:.:0.997285
chr2	173148039	HG2_PB_pbsv_2460	CATAATTAATGAGGGTGTTATTTCAGGAACAATGATAGGGATTGTGAATAGTCAAGAT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_13965:HG2_Ill_SpiralSDKrefine_9128:HG2_PB_PB10Xdip_16712:HG4_Ill_manta_586:HG4_Ill_Cortex_1940:HG2_Ill_manta_676:HG2_Ill_Cortex_4589:HG4_Ill_Spiral_195:HG2_Ill_Spiral_159:HG4_PB_pbsv_2472:HG4_Ill_svaba_3109:HG4_Ill_scalpel_2297:HG4_Ill_Krunchall_3519:HG4_Ill_GATKHC_4071:HG4_Ill_GATKHCSBGrefine_1702:HG4_Ill_250bpfermikitraw_3342:HG4_Ill_150bpfermikitraw_3225:HG4_10X_allpass_434:HG2_PB_pbsv_2460:HG2_PB_HySA_4675:HG2_Ill_svaba_3020:HG2_Ill_Krunchall_3356:HG2_Ill_GATKHC_4012:HG2_Ill_GATKHCSBGrefine_1614:HG2_Ill_250bpfermikitraw_3308:HG2_Ill_150bpfermikitraw_3062:HG2_10X_allpass_376:HG2_PB_assemblyticsfalcon_14376;NumClusterSVs=28;ExactMatchIDs=HG2_10X_allpass_376:HG2_Ill_150bpfermikitraw_3062:HG2_Ill_250bpfermikitraw_3308:HG2_Ill_GATKHCSBGrefine_1614:HG2_Ill_GATKHC_4012:HG2_Ill_Krunchall_3356:HG2_Ill_svaba_3020:HG2_PB_HySA_4675:HG2_PB_pbsv_2460:HG4_10X_allpass_434:HG4_Ill_150bpfermikitraw_3225:HG4_Ill_250bpfermikitraw_3342:HG4_Ill_GATKHCSBGrefine_1702:HG4_Ill_GATKHC_4071:HG4_Ill_Krunchall_3519:HG4_Ill_scalpel_2297:HG4_Ill_svaba_3109:HG4_PB_pbsv_2472;NumExactMatchSVs=18;ClusterMaxShiftDist=0.188679;ClusterMaxSizeDiff=0.188679;ClusterMaxEditDist=0.188679;PBcalls=6;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=-22;DistForward=-33;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:173148038-173148097;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2063.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:22:./.:18:8:3:5:1|0:0:24:26:0:0/1:31:30:./.:.:.:.:.:.
chr2	173179979	HG2_PB_SVrefine2PBcRplusDovetail_5989	CAGAATCTTTTCTTTGTCGCGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGACTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTGTGTGCACGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCGCACCTGGCTCAGAGGGTCCTACGCCCACGGAGTCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACACCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCACCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACAAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTCGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGTTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAACGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAACGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATGCTCCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCAACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTAAGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATACTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCAGTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGCAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTCAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATTAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAAGGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAAAAAAAATAATAAAAATAAAAATAAAAAAAAAATAAATAAAAAAAAAATAAAAAAAAATAAAAGAAAAAAAA	C	20	PASS	ClusterIDs=HG3_Ill_Krunchall_3369:HG2_Ill_SpiralSDKrefine_9129:HG4_10X_allpass_435:HG2_10X_allpass_377:HG4_PB_assemblyticsfalcon_14170:HG3_PB_assemblyticsfalcon_14394:HG2_PB_assemblyticsPBcR_13966:HG2_PB_assemblyticsfalcon_14377:HG2_PB_HySA_4676:HG2_Ill_tnscope_261:HG4_PB_pbsv_2473:HG4_PB_SVrefine2Falcon1Dovetail_1474:HG4_Ill_MetaSV_2775:HG4_Ill_Krunchall_3520:HG4_Ill_GATKHCSBGrefine_1703:HG3_PB_pbsv_2444:HG3_PB_SVrefine2PBcRDovetail_1255:HG3_PB_SVrefine2Falcon1Dovetail_1525:HG3_Ill_MetaSV_2822:HG3_Ill_Krunchall_3370:HG3_Ill_GATKHCSBGrefine_1630:HG2_PB_pbsv_2461:HG2_PB_SVrefine2PBcRplusDovetail_5989:HG2_PB_SVrefine2Falcon2Bionano_1011:HG2_PB_SVrefine2Falcon1plusDovetail_6463:HG2_Ill_MetaSV_2680:HG2_Ill_Krunchall_3357:HG2_Ill_GATKHCSBGrefine_1615:HG2_10X_SVrefine210Xhap12_1872:HG2_Ill_breakscan11_331;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1872:HG2_Ill_GATKHCSBGrefine_1615:HG2_Ill_Krunchall_3357:HG2_Ill_MetaSV_2680:HG2_PB_SVrefine2Falcon1plusDovetail_6463:HG2_PB_SVrefine2Falcon2Bionano_1011:HG2_PB_SVrefine2PBcRplusDovetail_5989:HG2_PB_pbsv_2461:HG3_Ill_GATKHCSBGrefine_1630:HG3_Ill_Krunchall_3370:HG3_Ill_MetaSV_2822:HG3_PB_SVrefine2Falcon1Dovetail_1525:HG3_PB_SVrefine2PBcRDovetail_1255:HG3_PB_pbsv_2444:HG4_Ill_GATKHCSBGrefine_1703:HG4_Ill_Krunchall_3520:HG4_Ill_MetaSV_2775:HG4_PB_SVrefine2Falcon1Dovetail_1474:HG4_PB_pbsv_2473;NumExactMatchSVs=19;ClusterMaxShiftDist=0.18617;ClusterMaxSizeDiff=0.18617;ClusterMaxEditDist=0.18617;PBcalls=14;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-6125;DistBack=31879;DistForward=6028;DistMin=6028;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=2:173179980-173186121;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2064.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:64:./.:31:13:5:18:1|0:0:24:37:0:0/1:43:19:0/1:375:229:5919:.:.
chr2	174198583	HG3_Ill_SVrefine2DISCOVARDovetail_1801	ACATATTTAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCACCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_332:HG2_PB_HySA_4688:HG2_10X_allpass_378:HG4_PB_assemblyticsfalcon_14182:HG3_PB_assemblyticsfalcon_14402:HG3_Ill_Krunchall_3386:HG2_Ill_Krunchall_3371:HG4_PB_pbsv_2477:HG2_PB_pbsv_2464:HG4_Ill_MetaSV_2778:HG3_Ill_MetaSV_2826:HG2_Ill_tnscope_262:HG2_Ill_MetaSV_2681:HG4_PB_SVrefine2PBcRDovetail_1299:HG4_PB_SVrefine2Falcon1Dovetail_1478:HG4_PB_HySA_3745:HG4_Ill_manta_588:HG4_Ill_GATKHCSBGrefine_1707:HG4_10X_allpass_437:HG3_PB_pbsv_2451:HG3_PB_SVrefine2PBcRDovetail_1261:HG3_PB_SVrefine2Falcon1Dovetail_1528:HG3_Ill_scalpel_2486:HG3_Ill_manta_541:HG3_Ill_SVrefine2DISCOVARDovetail_1801:HG3_Ill_GATKHCSBGrefine_1635:HG3_10X_allpass_473:HG2_PB_SVrefine2PB10Xhap12_1860:HG2_Ill_scalpel_2357:HG2_Ill_SpiralSDKrefine_9141:HG2_Ill_GATKHCSBGrefine_1618:HG2_10X_SVrefine210Xhap12_1877:HG3_PB_HySA_3838;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1877:HG2_Ill_GATKHCSBGrefine_1618:HG2_Ill_SpiralSDKrefine_9141:HG2_Ill_scalpel_2357:HG2_PB_SVrefine2PB10Xhap12_1860:HG3_10X_allpass_473:HG3_Ill_GATKHCSBGrefine_1635:HG3_Ill_SVrefine2DISCOVARDovetail_1801:HG3_Ill_manta_541:HG3_Ill_scalpel_2486:HG3_PB_SVrefine2Falcon1Dovetail_1528:HG3_PB_SVrefine2PBcRDovetail_1261:HG3_PB_pbsv_2451:HG4_10X_allpass_437:HG4_Ill_GATKHCSBGrefine_1707:HG4_Ill_manta_588:HG4_PB_HySA_3745:HG4_PB_SVrefine2Falcon1Dovetail_1478:HG4_PB_SVrefine2PBcRDovetail_1299;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0950872;ClusterMaxSizeDiff=0.0950872;ClusterMaxEditDist=0.0950872;PBcalls=13;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=728;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:174198584-174198919;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2065.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:34:0|1:22:3:1:25:0|1:33:0:0:22:0/1:38:19:0/1:23:9:.:.:.
chr2	175090625	HG4_10X_allpass_439	TGAAAATGAGCTTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_333:HG3_PB_pbsv_2456:HG4_PB_pbsv_2479:HG3_Ill_Krunchall_3395:HG2_Ill_Krunchall_3379:HG4_PB_assemblyticsfalcon_14190:HG3_PB_assemblyticsfalcon_14409:HG2_PB_assemblyticsfalcon_14391:HG2_PB_assemblyticsPBcR_13995:HG4_Ill_Krunchall_3535:HG2_Ill_Krunchall_3378:HG2_PB_pbsv_2467:HG4_PB_HySA_3754:HG4_Ill_MetaSV_2779:HG2_PB_HySA_4696:HG2_Ill_tnscope_263:HG2_Ill_MetaSV_2683:HG4_PB_SVrefine2PBcRDovetail_1301:HG4_PB_SVrefine2Falcon1Dovetail_1480:HG4_Ill_scalpel_2310:HG4_Ill_manta_592:HG4_Ill_SVrefine2DISCOVARDovetail_1840:HG4_Ill_GATKHCSBGrefine_1711:HG4_10X_allpass_439:HG3_PB_SVrefine2PBcRDovetail_1263:HG3_PB_SVrefine2Falcon1Dovetail_1530:HG3_Ill_manta_543:HG3_Ill_SVrefine2DISCOVARDovetail_1805:HG3_Ill_GATKHCSBGrefine_1636:HG3_10X_allpass_474:HG2_PB_SVrefine2PBcRplusDovetail_5999:HG2_PB_SVrefine2PB10Xhap12_1862:HG2_PB_SVrefine2Falcon2Bionano_1015:HG2_PB_SVrefine2Falcon1plusDovetail_6467:HG2_Ill_scalpel_2364:HG2_Ill_manta_680:HG2_Ill_SVrefine2DISCOVARplusDovetail_7065:HG2_Ill_GATKHCSBGrefine_1621:HG2_10X_allpass_379:HG2_10X_SVrefine210Xhap12_1878;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1878:HG2_10X_allpass_379:HG2_Ill_GATKHCSBGrefine_1621:HG2_Ill_SVrefine2DISCOVARplusDovetail_7065:HG2_Ill_manta_680:HG2_Ill_scalpel_2364:HG2_PB_SVrefine2Falcon1plusDovetail_6467:HG2_PB_SVrefine2Falcon2Bionano_1015:HG2_PB_SVrefine2PB10Xhap12_1862:HG2_PB_SVrefine2PBcRplusDovetail_5999:HG3_10X_allpass_474:HG3_Ill_GATKHCSBGrefine_1636:HG3_Ill_SVrefine2DISCOVARDovetail_1805:HG3_Ill_manta_543:HG3_PB_SVrefine2Falcon1Dovetail_1530:HG3_PB_SVrefine2PBcRDovetail_1263:HG4_10X_allpass_439:HG4_Ill_GATKHCSBGrefine_1711:HG4_Ill_SVrefine2DISCOVARDovetail_1840:HG4_Ill_manta_592:HG4_Ill_scalpel_2310:HG4_PB_SVrefine2Falcon1Dovetail_1480:HG4_PB_SVrefine2PBcRDovetail_1301;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0923567;ClusterMaxSizeDiff=0.0923567;ClusterMaxEditDist=0.0923567;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-321;DistForward=35;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:175090626-175090960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2066.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:3:28:0:24:./.:0:24:1:18:1/1:0:56:./.:1:15:.:.:.
chr2	176102663	HG4_Ill_SVrefine2DISCOVARDovetail_1845	TGTAAACATCCATGTACAGGTTTTCATGTGGATACAAGTTTTCACTTCATTTGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1881:HG3_PB_HySA_3859:HG4_PB_pbsv_2482:HG2_PB_pbsv_2470:HG3_PB_pbsv_2459:HG4_PB_HySA_3761:HG2_PB_HySA_4710:HG4_PB_SVrefine2PBcRDovetail_1303:HG4_PB_SVrefine2Falcon1Dovetail_1482:HG4_Ill_svaba_3125:HG4_Ill_manta_594:HG4_Ill_SVrefine2DISCOVARDovetail_1845:HG4_Ill_Krunchall_3541:HG4_Ill_GATKHCSBGrefine_1713:HG4_Ill_250bpfermikitraw_3363:HG4_Ill_150bpfermikitraw_3243:HG3_PB_SVrefine2PBcRDovetail_1264:HG3_PB_SVrefine2Falcon1Dovetail_1532:HG3_Ill_svaba_3157:HG3_Ill_manta_544:HG3_Ill_SVrefine2DISCOVARDovetail_1809:HG3_Ill_Krunchall_3404:HG3_Ill_GATKHCSBGrefine_1637:HG3_Ill_250bpfermikitraw_3312:HG3_Ill_150bpfermikitraw_3193:HG3_10X_allpass_475:HG2_PB_SVrefine2PBcRplusDovetail_6004:HG2_PB_SVrefine2PB10Xhap12_1864:HG2_PB_SVrefine2Falcon2Bionano_1017:HG2_PB_SVrefine2Falcon1plusDovetail_6470:HG2_Ill_svaba_3043:HG2_Ill_manta_682:HG2_Ill_SpiralSDKrefine_9145:HG2_Ill_SVrefine2DISCOVARplusDovetail_7068:HG2_Ill_GATKHCSBGrefine_1624:HG2_Ill_250bpfermikitraw_3334:HG2_Ill_150bpfermikitraw_3088;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1881:HG4_PB_SVrefine2PBcRDovetail_1303:HG4_PB_SVrefine2Falcon1Dovetail_1482:HG4_Ill_svaba_3125:HG4_Ill_manta_594:HG4_Ill_SVrefine2DISCOVARDovetail_1845:HG4_Ill_Krunchall_3541:HG4_Ill_GATKHCSBGrefine_1713:HG4_Ill_250bpfermikitraw_3363:HG4_Ill_150bpfermikitraw_3243:HG3_PB_SVrefine2PBcRDovetail_1264:HG3_PB_SVrefine2Falcon1Dovetail_1532:HG3_Ill_svaba_3157:HG3_Ill_manta_544:HG3_Ill_SVrefine2DISCOVARDovetail_1809:HG3_Ill_Krunchall_3404:HG3_Ill_GATKHCSBGrefine_1637:HG3_Ill_250bpfermikitraw_3312:HG3_Ill_150bpfermikitraw_3193:HG3_10X_allpass_475:HG2_PB_SVrefine2PBcRplusDovetail_6004:HG2_PB_SVrefine2PB10Xhap12_1864:HG2_PB_SVrefine2Falcon2Bionano_1017:HG2_PB_SVrefine2Falcon1plusDovetail_6470:HG2_Ill_svaba_3043:HG2_Ill_manta_682:HG2_Ill_SpiralSDKrefine_9145:HG2_Ill_SVrefine2DISCOVARplusDovetail_7068:HG2_Ill_GATKHCSBGrefine_1624:HG2_Ill_250bpfermikitraw_3334:HG2_Ill_150bpfermikitraw_3088;NumExactMatchSVs=31;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0377358;PBcalls=14;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=21;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-53;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=58;REFWIDENED=2:176102664-176102774;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2067.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:1/1:1:9:0:16:1/1:0:19:0:11:1/1:0:46:./.:.:.:.:.:.
chr2	177265641	HG3_PB_SVrefine2PBcRDovetail_1266	CTATTCAAATAGTGAAGTGAAAAAAAATCAGTGAAGGATTCTACCAGATAGACATCTGGAAAACATGAGAAATGAATTTTTTTAACCTCTGAGCATTGGGGGTCTTGTACTTATACATCATCTGCCTAGTGTTGCTTCCAGATGCAAGAATGAACTTGGTAAAGAATGATACATGTTATAAAGAAGAATAGAAAATACTTAAGATTGTAGGCACATCATAATAATCTGATTTTTTTCTTCAAAAAAGTATATTTAGTTTGAAATTGTAAAACTTGAAATATTGTTTAATAAATTTGTCAGAGCAAAAGAACTTGAATGTTTAATAAGTTTTATCATTAAATTTGGAATATGCATCAGCTATCATAACTGTAGCTGATTCTAAAATATGGATTTATTTTGATATATTGATTCTATTAATTTTTTGTCTCTTTATTTAAAAAATTTTTATAAATTGCCTTGTACAATTTACAAGGCAAATCATTTTAAAGGGTTAAAATTAATAACAATAGCCTCTGACTCAAACTTCCCCTCCTCTGAGTCCTTTTCAATGGAAACCACTTTTAGCTCCTCCAGCTTGTTCTTCTAGTATTTGTGATCATTATTTTGAGAAACATCCTTACACCACTATTAAAAATCCTTCTTTTCAGCTTTAGGTATTATCTATTAGTTTCCTACTTGTGATGATGAGGGTCAGTTTTCTTCCACATCCTTCCTCCCTCCATCTTCATTTTACTTAGACCAATATTCAAAGTTTATGACTATGTAAATATTTTTTACAGCTAAGCCGTACAATATGATACTATTTCCTTTATTGCATACTATATTGTTCTCTCTGGAATTGGTAACTCTCCTTCTCTTTTTCGTTTGCTTAGTTTTCTGTTTTTGTTCTAGCTTATCCCCAAGTCTTGGACAGAGTGGTACATTTTTCTCTGATTTCAGTTAAACAAACCAGGTAACTTTTTTCTTAGGTACACCCCTCCAGAATCTCTTTTCGCCTTGCTCTAGTCTAGACTAAGCTGTGTGCTATTTATTGTCCTAGAAGCTTCCTTTACTATCATCTTGTAGATTCCACTGCCTTTCTCTGCACTGGAATCTTTGTTTCCTGGATCCCATACATTTCAGGTTCTTGTTTTTCCATCCTTTGGATAGTAAGCCTCTATTCTATTAGCTTTCTAAATAAATAAAATGCAGAGAAGATACTTTTTTTTGTCTTTGCATTTACAAAAATGATGTTATGCTATCTAATATTTGATCAATAGTTTGGCTGAGAATATAATTCTACTATGTAAGTAATTTTCCCTCAGTATTTTGATGGCATTGCTCCATTGTCTTCCAGTTTCTGATTTTGTTGTTAAGATTTCCTATGCCTTTCTTTGTATGAGCCTGTTACAAAGCTTCCTGGATTTCCTCTTTGTTTCCAGAGTTTTGAAATTTCATGATCATGAGCTTTGATATTAGACTTTTTTCATTTGCTGTGCTGGGTACTTGAGCCCTCTTAATACATGAATGCATGTCGTTTTCTTCTGAGTGTTCTTTTCTGGTGTTATTTCTTTGATGATTTCCTCTCCACCTCCTGCCCTAGTCTTCCTTTGTAAAGGTACTATCATTCAGAAGCTGGACTTCCTAAACAGATTACTTAAATTTTTCATCTTATTTCTCTCATGTTCATATATTTATCATTTTTATTTGGTTTCTGGGATTTTTTTCTCAACTTTATATTCCAAACAGTGAATTTTTTTCTACGATCATAATTTCCAAGAACTCTTTACTCTTCTTTGAATATTTTAAAATAACATAATTTTGAAAATCTTATTTTTAATTTTCTTTTCTGATCATACATTGTTTCTGTTTTCTCCAAGTCTGATCTTCCCTCCCTCCCTCCCCTCCTTCCTCCTTCCTGCCTTCCCTTCCCTGCCCTTCCCTTTCTTACTTCCCCCTCCCTCCCTTCCCTTTCTTCCTTCCCCCTCCCTCCCTTCCCTTTCTTCCTTCCCTCTCCCTCCCTCCCTTCCCTTTCTACCTTCCTCCCTCCCTCCCTTCCTCCTTTTCTTCCTTCCTTCCTTTCTTTCCCTCCCTCCTTCCCTTTCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCATTTTTATATGTTAGAAGCATTTCTCACATGTCTAATGATCCTTGGCTGTCTGTCCATTTGTGGGAATGAGCCTCTGTCATGTGATCTGGAAGCTGTGTGCAGGTGCACGTGTGTGCCCAAATTCTCACTAGGCTTCACTCTTAGGTGACCCGACAGTATTCTTCTATTAGGGGAATGTCCAAGCTGTTTGTATGTATTGGTCTTTTCTTTAGCTTGGTCAGTTGTTCTCAGAGAGAAATACTGCCTGGGAGCCATTAGCCAGGCCCCCAGCATTCTTGCATTCAACTGGGGAAGGGTACTGTTCTGTGTGTAGACTTTCACTTAGTCCTTCTGTTTCCCGTAAGGAAATCCTATGCTCAGCTGTGACTTGTGTTCTTGTGACCAAAGTCACTCGAATTCAACTTTCCAGAGAATAAATCTCTAGAATTCTACCAGCTTAGTTAGTGATAGTATATTGCCGAACCATGGTGGCTGGAGAAGGAGATCTGTTGTATATAACTGCCATAGAATACACTGTGTATAAAATTTTAACCAATCCATTTGTTTTCAGTTCCCCCACAACCCTACCTCCAGAGGTATCAACTGCTCCATTTCCTAAGCCTTTTAGGGTTCTGTAGTGCAACTATATTTGTTCCCAGACTTTCCCCCACTGCTGGCTTCAGTTTCTGTTTTCTGACTCTGCCTAGAGAGTTATAACTTCTCTACTTGCTTCCAAGTAGAGAATTCCAAGATATTACTGTTATCTTCTCACTTATTCTCTTAATCCTTGTGAGTGAATACTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTTGCCCAGGTGTGAGTGAATACTTTTAAAAAAATTATTTAATTCCCCCTGAAGCAGTGATTTGGAGAGAATAAATGCATCAGTGACAGCATCTGTTACATCTACCCTGTTTAAATAGAAACATCCTTTTTCCTGACTCTTCGGTTGTCCTTTTTATGTTAGGCCTGCTCATTCTTGTTTCTTTTCAGGTTTTCAAAGGAGACTTCCTTAAAGCTCAGCCCTTTGTACTTCCTTCTCTTTGGTGTCTACTTTGAAGACCTCATAAATACAATAATCTTTCTTATGCTACTTCTTTAAAGACTGTATCCTCAATCTTATTTATCATCTAACCCCAAGTTCCATATTTCCATCTGCCCAGTAGCGCAGGGACTAGGGGGAAAGAATTGTGGTCCCAGGTGCAAAGTTTAAGGAGGCCCTCACTCTCAGGGCTGTGCTCCCTGAGACCTTGAGAGTCACCACCTTCTTGAGTTTGGTATCCTGGGCTTCTTACCCTCCCCAGCCCAATGCCAGTCCTGCTGCCTCCTACATAGCCACATTTTGGCTATCACAATGTCACCTCCCACTCATTATGTCTGTATCAGTCCATTCTTGCATTGCTATAAAGAAATACCTGAGACTGGGTAATTTGAAGAAAAGAGGTTAAATTGTGTCATGGTTCTGCGGGCTGTACAAGAAGCATAGCGGCATCTGCTTGGCTTCTGGAGAAGCCTCAGAAAACTTACAATAATGGCAGAAGGTGAAAGGGGAGTGGTCATTTGACATGGCAGGAGCAGGAGCAGGAGAGAGTGCGGAGGTGCCACAGACTTTTAAACAACAAGATCTTGTGAGAATTCACTGACTATTATGAGAACAGCACCAAGAGGATGGTGCTAAACCACTCATGTAGGATCCACTCCCATGATCCAATCACCTCCCACCAGACCCCACCTCCAACACTGGGGATTACAGTTCGACATGAGATTTGGCGGGGATACAGATCCAAACCATGTCAATGTCTAAAACCAACTTCACCAATTTTCTATTCACAATTCTTCCTTTTTTCCCTACCTCTATTTCTGGTTATTTTCAATAGCACTACCATTCTCCCTGTCAGATTCATTTATCACCTTTTCCAGTGTCCTGATATTCCAATTCTAACTTTTACCTATTTTCCCTTTAAAGTATGTCTTGGCTGGGCGCGGTGGCACATGCCTGTAAACCCAGCACTTTGGGAGGCTGAGGTGGGCAGATAACTCAATGTCAGGAGTTTGAGAGCAGCCTGGCCAAAATGGTGAAATCCCGTCTCTACGAAAACCACAAAAATTAGCCACATGTGATAACGCATGCTTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGAATTGCTGGAACCCAGGAGGCCGAGGTTGCAGTGAGCTGAGGTCGTGCCACTGCAATCCAGCCTGGGCAACAGAGTGAGACCCTGTCTCAAAGAAAAAAAAAGTATGTCTTTTATTTGTTCTGTCCTTTTCATGTTTTTTTTTCTAATTACTTCCAACAGAGATTTTAACTCTGCAAGCCTTGAACAGAGACTTTCCCTGCTTCAAAATTTCCTACACACTGTTTTCATCACCTCCCTCCTAGAAACCTCAGTGTCTACTTCCTCCCCATTCAAATCTACCATGCCTACTAGACTTTCAAAGCCCTCCATTACCCGACTCTACTTCACCTTCAACAAATTCATCTTTCTTTAAGGTTCAATACAAGTCATAACTCCTTCGTGAAGCTTTGAGTCACTATTCATTCCTTCACTGACTAGTCTGTTTAGTTTCCTCCTTTCAGTTCCTCTGGTACTAATTGTTCATTTCACACTTAATTTTACGCTGACTTGTGCTATTCCATGCCTCACGGCCATCTTCCACTCACTGGGCCAGAGCCAAGTCAATCATCTTCCCACTCACAACTCACTTCTCCTTTTCTCACCTATCATTCTAGTTTCTGTCAGGGACACTTCTAATCTCTAAGCCAGATTCATGGATCTCCTTTACCTGCCCCCTGATACTCTGATTTAAAGTTCGATCAATTTTTCCTGTAAAATATGTCTCATGTTTGTATGTCTGCCTCCTTCCCTAGACAGTAAGCATCTGAAAGGCAGGATGCATATGTGAATATGGCTTCTTGCAGAGTTTTAAGCAAATAGCAGGTTTCCAAATTCTCCTTAACAAGTAAGAAAACCTCCTCCAATATTTTACATGATAGTTATCCATGAGAAAGAAGGACTAATTTATCTTCTTATCAAAATATATCATTTCCAAAGAAGAGGATATTGCAGGGTTACCCCAGTCCCACGTGGGAATTATCATTCAGCATGTATTTTTAAAATATTTGTACAATTAGATAAAATGTTTAAAACTGAGTGCCAAAACTGTCTGTAACACTTAAACTTTAGTTATTCAAAATATGTCTCTGGTTACTATGATTATTAAAAGGCTGTGTTTTCCATAAAGGCTTATATAATGTAAGACACCAAGAAACTTTCTAAACATTGCCAACTCAACGTTATAGAATGTACTGACCCCAATAAAGTCTCAATATCCTGTTACCACTTCCCAGCTTCTTTCCCTGTTCCTTCCCTTTTTCCTTGGTGAATGCCTACGGTTTCATCACTAAAAACAAGAAGTTTAAAAACCAAGGAAGAACAAACAACAATCATTATAATTTGCTAATACATTTTCAGTCTTTCCAGAATTCCTGAACAAGTAATTTGTTCAGTTATTCCAACAACAATAAACCTCTGCAAACTATCAAACTACCAGTTATTTGGGAAATGAGAAATTCAATTAGGAAATGGCAAATGGGGTTGAATTAGCACTTCTCTGGGAATATATGGGATCAGAATTTAGGGCAGAATCTCAGAGCTTTTTGGCCTTCATGGACATTTGATGGGGAAGAGTCAACAGATGATGGCTGTTTTCCTAATTGTTCAGGCCTGGACTCCACACTATTTAATTATCCATCTTGGTCTTGCAGTGTTTGTGGTGGTTACCCAGTCGTCATGAGATACCATCTCTACATTCACTCTTTTCTCAGCAGCTTCCTGACTATAATTAACAGGTATTTGCTACTTTTGTCCTTATAGCAAGGCTGCTCCAATTTTATGTGCTTAGGAATCACTGGGATTTTGTAAACATGCAGATTCTGATTGGGTGCTTCTGGGTGGATCTGGAAGGGTGGTTCTGGTTCTGGGTGGGTCTAGAAAGTTGCATTTTGCAAAAGCTCCCACATGAGGCCAATGCTGCTTATCTAAGGAACACACTGGGAATAGTAAGGACTTTGGAATATTCAGAAAAATGTATTCATGTTTCAAAGTATTCTTTTTAAGAATAAAGTGAGGCAGGTTGCCAAGTTTCTGTATGTTGAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGCCTGACTCTGTCGCCTAGGCTGGAGGGCAGTGGCATGA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1885:HG2_10X_allpass_380:HG3_PB_pbsv_2464:HG2_PB_pbsv_2473:HG3_10X_allpass_476:HG2_PB_assemblyticsPBcR_14013:HG2_PB_SVrefine2PBcRplusDovetail_6007:HG4_PB_assemblyticsfalcon_14198:HG3_Ill_Krunchall_3411:HG3_PB_assemblyticsfalcon_14420:HG3_Ill_MetaSV_2830:HG2_Ill_tnscope_264:HG4_PB_SVrefine2Falcon1Dovetail_1483:HG3_PB_SVrefine2PBcRDovetail_1266:HG3_PB_SVrefine2Falcon1Dovetail_1535:HG3_Ill_SVrefine2DISCOVARDovetail_1815:HG3_Ill_GATKHCSBGrefine_1641:HG2_PB_SVrefine2PB10Xhap12_1867:HG2_PB_SVrefine2Falcon2Bionano_1020:HG2_PB_SVrefine2Falcon1plusDovetail_6473:HG2_Ill_breakscan11_334:HG2_Ill_SpiralSDKrefine_9148:HG2_Ill_MetaSV_2686;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1885:HG4_PB_SVrefine2Falcon1Dovetail_1483:HG3_PB_SVrefine2PBcRDovetail_1266:HG3_PB_SVrefine2Falcon1Dovetail_1535:HG3_Ill_SVrefine2DISCOVARDovetail_1815:HG3_Ill_GATKHCSBGrefine_1641:HG2_PB_SVrefine2PB10Xhap12_1867:HG2_PB_SVrefine2Falcon2Bionano_1020:HG2_PB_SVrefine2Falcon1plusDovetail_6473:HG2_Ill_breakscan11_334:HG2_Ill_SpiralSDKrefine_9148:HG2_Ill_MetaSV_2686;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0196884;ClusterMaxSizeDiff=0.0196884;ClusterMaxEditDist=0.0196884;PBcalls=12;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-6399;DistBack=4568;DistForward=-6399;DistMin=-6399;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=2:177265642-177272044;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2069.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:60:./.:16:18:19:7:0|1:51:0:0:27:0/1:52:18:0/1:411:204:6440:.:.
chr2	178855455	HG2_PB_pbsv_2481	ACTCTGTCTCAAAAAAAAAAAAAAGGAAAAAAAAGGCGGAGGGTAGCGTGGTGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGTGGAGGTGGACAGATCACAAGGTCAACAAAAATTAGCTGGGCACGGTGGTGCGCTCCTGCAGTCCCAGCTACTTGGGAGGCTAAGGCAGAAGAATTGCTTGAACCCAGGAGGTAGAGGTTGTGGTGAACTGAGATCATGCCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCATCTTAAATAAATAAATAAATAAAATAAAGAACAAGTATTTAAAATATATCTTGGCTGGGCACAGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCAGCATGGGTAGATTACTTGAGGTCAGGAGTTCGAGATTAGCCTGGCCAACATGGTAAAACCACCATCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGTACTCACCTGTAATCCCACCTACTCAGGATTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATTGTGCCACTGTACTCCAGCCTGGGCGACAGAGTAAGACTCTGTCTCAAAAAGTAAAATATAATATATTGGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCATGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCAGGCACTTGTAATCCCACCTACTCGGGAGGCTGAGGTAGGAGTATCACTTGAACCCAGGAGGCGGAGGTTGCAGTGTGCCGAGACCACACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCATTTCAAAAAATGATAATAATAATAATAATATACCTTATATTTGGAAATGAAAATATATATACTCTTTTCATATGCAAATTATAGAAAGTCACATCAAACAACTTTTTCATGGCTGGTCAGGATAGAATTCTTCTAGATTTTTATGATGGCATGAGTTTTTAAGTGCTGCAAAACATCTATATAAAGAGCATTATCTTCTTCCAATAAGTTTTTTGAGATTTCTTTTTAATTGGGTACATACTTAAGGGAAGAGATTTGGGCCATAATACAATCTCCTATTCTCAGCTCCAGTCCGACAAGAGACCCTAATTAAATTTCTAACTGTTCTCTAAATAACACATTTACCCTTATAGTAAAACTCATTTATAATAATGCTTTGGGGGGAGTACCTGATAACCTCTTAGAGGCTTCCTAATTATAAAAGACTAAATAATATATTACTGCTTTTTTTTCTAATTCTAAAATAATACATCTCACATAATCTTAATAAAGACAGTAGAGATAAAAATAGCACCAAAAAATCTACAGATCAATTTCATTATCCATATTAAGTGCTAACTGAACCCAGCATTATATCAAAATAATACACTACCACCAAACAGGATTCATCTCAGAAATAAAAGTAATACAAGACCAAAGTTTAACAAAGTTTTCAAACAGTATATAAATTAATACAGTGGAAAATAAAAATTGCCCAGAAATCAGATGGTGGTTAAGTGTGGAAAAAGATTCCAGGGCATCCACTTGCTTTAACTGTCAAAACGCCTGCATCAAAAACACTTGAATCAAAATGTTCTATGTATATAGATGGTAAACAGAAGTTACCAAAATATTTCTACCATTCATGCTATTTGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1891:HG4_10X_allpass_441:HG4_PB_assemblyticsfalcon_14213:HG2_Ill_Krunchall_3398:HG3_PB_assemblyticsfalcon_14440:HG2_PB_assemblyticsPBcR_14027:HG2_10X_allpass_383:HG2_Ill_tnscope_266:HG4_PB_pbsv_2490:HG4_PB_SVrefine2Falcon1Dovetail_1491:HG4_Ill_MetaSV_2783:HG3_PB_SVrefine2Falcon1Dovetail_1544:HG2_PB_pbsv_2481:HG2_PB_SVrefine2PBcRplusDovetail_6014:HG2_PB_SVrefine2PB10Xhap12_1872:HG2_PB_SVrefine2Falcon2Bionano_1027:HG2_PB_SVrefine2Falcon1plusDovetail_6479:HG2_Ill_SVrefine2DISCOVARplusDovetail_7076:HG2_Ill_MetaSV_2688;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1891:HG4_PB_pbsv_2490:HG4_PB_SVrefine2Falcon1Dovetail_1491:HG4_Ill_MetaSV_2783:HG3_PB_SVrefine2Falcon1Dovetail_1544:HG2_PB_pbsv_2481:HG2_PB_SVrefine2PBcRplusDovetail_6014:HG2_PB_SVrefine2PB10Xhap12_1872:HG2_PB_SVrefine2Falcon2Bionano_1027:HG2_PB_SVrefine2Falcon1plusDovetail_6479:HG2_Ill_SVrefine2DISCOVARplusDovetail_7076:HG2_Ill_MetaSV_2688;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00627317;ClusterMaxSizeDiff=0.00627317;ClusterMaxEditDist=0.00627496;PBcalls=11;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1757;DistBack=7548;DistForward=-1753;DistMin=-1753;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=2:178855456-178857216;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2070.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:41:0|1:23:2:3:25:1|0:1:20:49:0:0/1:44:30:0/1:150:70:1678:.:.
chr2	180422250	HG3_PB_HySA_3896	GTGTATGTTATATACATGTATATAACATATATACATGTTATATATGTATGTTATATACATGTATATAACATATATACATGTTATATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1898:HG4_PB_pbsv_2498:HG3_PB_pbsv_2481:HG2_PB_pbsv_2489:HG4_PB_HySA_3788:HG2_PB_HySA_4744:HG4_Ill_Krunchall_3576:HG4_Ill_GATKHC_4134:HG4_Ill_GATKHCSBGrefine_1724:HG4_Ill_250bpfermikitraw_3396:HG3_PB_HySA_3896:HG3_Ill_manta_550:HG3_Ill_Krunchall_3441:HG3_Ill_GATKHCSBGrefine_1655:HG2_Ill_manta_688:HG2_Ill_SpiralSDKrefine_9170:HG2_Ill_Krunchall_3420:HG2_Ill_GATKHCSBGrefine_1638:HG4_Ill_Krunchall_3575:HG4_PB_SVrefine2PBcRDovetail_1315:HG4_PB_SVrefine2Falcon1Dovetail_1495:HG4_Ill_SVrefine2DISCOVARDovetail_1860:HG3_PB_SVrefine2Falcon1Dovetail_1548;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1638:HG2_Ill_Krunchall_3420:HG2_Ill_SpiralSDKrefine_9170:HG2_Ill_manta_688:HG3_Ill_GATKHCSBGrefine_1655:HG3_Ill_Krunchall_3441:HG3_Ill_manta_550:HG3_PB_HySA_3896:HG4_Ill_250bpfermikitraw_3396:HG4_Ill_GATKHCSBGrefine_1724:HG4_Ill_GATKHC_4134:HG4_Ill_Krunchall_3576;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0229885;ClusterMaxSizeDiff=0.0229885;ClusterMaxEditDist=0.0344828;PBcalls=9;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-86;DistBack=17051;DistForward=-29;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=152;REFWIDENED=2:180422223-180422460;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2072.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:57:1/1:3:19:1:31:1/1:0:11:0:13:1/1:0:46:./.:.:.:.:.:.
chr2	182355971	HG2_Ill_scalpel_2398	TAAGAATTACATCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACAAGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCTAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_2507:HG4_Ill_Krunchall_3587:HG2_Ill_Krunchall_3432:HG4_PB_assemblyticsfalcon_14235:HG3_PB_assemblyticsfalcon_14468:HG2_PB_assemblyticsfalcon_14446:HG2_PB_assemblyticsPBcR_14055:HG3_PB_pbsv_2494:HG4_PB_HySA_3797:HG4_Ill_MetaSV_2788:HG3_Ill_MetaSV_2841:HG2_PB_HySA_4758:HG2_Ill_tnscope_267:HG2_Ill_MetaSV_2697:HG4_PB_SVrefine2PBcRDovetail_1318:HG4_PB_SVrefine2Falcon1Dovetail_1501:HG4_Ill_scalpel_2345:HG4_Ill_manta_600:HG4_Ill_SVrefine2DISCOVARDovetail_1865:HG4_Ill_Krunchall_3586:HG4_Ill_GATKHCSBGrefine_1729:HG4_10X_allpass_445:HG3_PB_SVrefine2PBcRDovetail_1282:HG3_PB_SVrefine2Falcon1Dovetail_1556:HG3_PB_HySA_3908:HG3_Ill_scalpel_2533:HG3_Ill_manta_555:HG3_Ill_SVrefine2DISCOVARDovetail_1831:HG3_Ill_Krunchall_3454:HG3_Ill_GATKHCSBGrefine_1663:HG3_10X_allpass_484:HG2_PB_pbsv_2498:HG2_PB_SVrefine2PBcRplusDovetail_6025:HG2_PB_SVrefine2PB10Xhap12_1880:HG2_PB_SVrefine2Falcon2Bionano_1037:HG2_PB_SVrefine2Falcon1plusDovetail_6490:HG2_Ill_scalpel_2398:HG2_Ill_manta_692:HG2_Ill_SVrefine2DISCOVARplusDovetail_7087:HG2_Ill_Krunchall_3431:HG2_Ill_GATKHCSBGrefine_1645:HG2_10X_allpass_388:HG2_10X_SVrefine210Xhap12_1900:HG2_Ill_breakscan11_336;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1900:HG2_10X_allpass_388:HG2_Ill_GATKHCSBGrefine_1645:HG2_Ill_Krunchall_3431:HG2_Ill_SVrefine2DISCOVARplusDovetail_7087:HG2_Ill_manta_692:HG2_Ill_scalpel_2398:HG2_PB_SVrefine2Falcon1plusDovetail_6490:HG2_PB_SVrefine2Falcon2Bionano_1037:HG2_PB_SVrefine2PB10Xhap12_1880:HG2_PB_SVrefine2PBcRplusDovetail_6025:HG2_PB_pbsv_2498:HG3_10X_allpass_484:HG3_Ill_GATKHCSBGrefine_1663:HG3_Ill_Krunchall_3454:HG3_Ill_SVrefine2DISCOVARDovetail_1831:HG3_Ill_manta_555:HG3_Ill_scalpel_2533:HG3_PB_HySA_3908:HG3_PB_SVrefine2Falcon1Dovetail_1556:HG3_PB_SVrefine2PBcRDovetail_1282:HG4_10X_allpass_445:HG4_Ill_GATKHCSBGrefine_1729:HG4_Ill_Krunchall_3586:HG4_Ill_SVrefine2DISCOVARDovetail_1865:HG4_Ill_manta_600:HG4_Ill_scalpel_2345:HG4_PB_SVrefine2Falcon1Dovetail_1501:HG4_PB_SVrefine2PBcRDovetail_1318;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.0740741;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=30677;DistForward=-304;DistMin=-304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=2:182355972-182356298;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2073.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:84:1/1:1:37:2:32:1/1:0:25:0:54:1/1:0:47:./.:1:12:.:.:.
chr2	182565240	HG4_PB_SVrefine2PBcRDovetail_1319	GCTTCTTTCTACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGCCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1902:HG2_PB_assemblyticsfalcon_14448:HG2_PB_assemblyticsPBcR_14057:HG4_PB_assemblyticsfalcon_14236:HG3_PB_assemblyticsfalcon_14470:HG4_Ill_Krunchall_3590:HG3_Ill_Krunchall_3455:HG2_Ill_Krunchall_3434:HG3_10X_allpass_485:HG2_Ill_breakscan11_337:HG3_PB_pbsv_2495:HG3_PB_HySA_3909:HG2_PB_pbsv_2499:HG2_PB_HySA_4760:HG4_PB_HySA_3799:HG4_Ill_MetaSV_2789:HG2_Ill_tnscope_268:HG2_Ill_MetaSV_2698:HG4_PB_pbsv_2509:HG4_PB_SVrefine2PBcRDovetail_1319:HG4_PB_SVrefine2Falcon1Dovetail_1502:HG4_Ill_svaba_3160:HG4_Ill_scalpel_2349:HG4_Ill_manta_601:HG4_Ill_SVrefine2DISCOVARDovetail_1867:HG4_Ill_GATKHCSBGrefine_1730:HG4_10X_allpass_446:HG3_PB_SVrefine2PBcRDovetail_1283:HG3_PB_SVrefine2Falcon1Dovetail_1557:HG3_Ill_svaba_3191:HG3_Ill_scalpel_2534:HG3_Ill_manta_556:HG3_Ill_SVrefine2DISCOVARDovetail_1832:HG3_Ill_GATKHCSBGrefine_1664:HG2_PB_SVrefine2PBcRplusDovetail_6026:HG2_PB_SVrefine2PB10Xhap12_1881:HG2_PB_SVrefine2Falcon2Bionano_1038:HG2_PB_SVrefine2Falcon1plusDovetail_6491:HG2_Ill_svaba_3074:HG2_Ill_scalpel_2401:HG2_Ill_manta_693:HG2_Ill_SVrefine2DISCOVARplusDovetail_7089:HG2_Ill_GATKHCSBGrefine_1646:HG2_10X_allpass_389;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1902:HG4_PB_pbsv_2509:HG4_PB_SVrefine2PBcRDovetail_1319:HG4_PB_SVrefine2Falcon1Dovetail_1502:HG4_Ill_svaba_3160:HG4_Ill_scalpel_2349:HG4_Ill_manta_601:HG4_Ill_SVrefine2DISCOVARDovetail_1867:HG4_Ill_GATKHCSBGrefine_1730:HG4_10X_allpass_446:HG3_PB_SVrefine2PBcRDovetail_1283:HG3_PB_SVrefine2Falcon1Dovetail_1557:HG3_Ill_svaba_3191:HG3_Ill_scalpel_2534:HG3_Ill_manta_556:HG3_Ill_SVrefine2DISCOVARDovetail_1832:HG3_Ill_GATKHCSBGrefine_1664:HG2_PB_SVrefine2PBcRplusDovetail_6026:HG2_PB_SVrefine2PB10Xhap12_1881:HG2_PB_SVrefine2Falcon2Bionano_1038:HG2_PB_SVrefine2Falcon1plusDovetail_6491:HG2_Ill_svaba_3074:HG2_Ill_scalpel_2401:HG2_Ill_manta_693:HG2_Ill_SVrefine2DISCOVARplusDovetail_7089:HG2_Ill_GATKHCSBGrefine_1646:HG2_10X_allpass_389;NumExactMatchSVs=27;ClusterMaxShiftDist=0.312321;ClusterMaxSizeDiff=0.312321;ClusterMaxEditDist=0.312321;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-447;DistForward=74957;DistMin=-447;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=24;REFWIDENED=2:182565241-182565592;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2074.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:87:1/1:1:20:1:42:1/1:0:28:0:24:1/1:0:57:0/1:2:11:.:.:.
chr2	182856914	HG2_PB_SVrefine2PB10Xhap12_1882	GCTTTTCAACTCCAGCTCTGATAATTTCAGATGTTAGAAAATGATTTCTTATACCAAACTTAAATATAAATTCCCCACTTTATTCTAAAATAACTTCATTTGTTCTCTGCAATAAAAAGTCATTTTCTCACCTTTTAAAAAATATGAATGAATGATTATTTTCTTTTATTCTCAATCTCCCTAAGGGCTTTAATAAACTCTATCCGAATTCTCCCTATTGCTCTGCCTTTGAAGCCCAGAGCTGGACACAGTCTTCCAGTAAAAAGCCAGCCTAGACCAGGTCTTCTGAATATTAAAGTTTGTGGCATCCATTGTTTTCCATTTACCGTTAAGCAGAGACAATATGGTTACAGTTATATTTAATGGACCTGACGCCTACTAAACATGAGTGAGCTGTATGAGGCCTGGAGATAAGTGCAGATTTGGGTAAGTACCCAGGAGTTTTGACGTCATTTAAAAGCTCACTGTACATCTAAAAAGTGGAATCCGAAGCATAAGGTAAAATAGTTTTTTGAGTATATTTATTGAACTTCCTATCACAGCCAAATTTTGGGGAAATCGACTTTATCTTTGACCCTTTTAGTGTCAAATATCCTTTGAAATCAAGAATAAAAACAAAGGTTGTTCTCACATGCCTCAGGTTCCCAAAAGTTAGTTAATAGGAGACATAAGAGATATATGATA	G	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_14471:HG4_10X_allpass_447:HG4_PB_pbsv_2510:HG2_PB_assemblyticsfalcon_14449:HG4_Ill_Krunchall_3591:HG2_Ill_Krunchall_3435:HG4_PB_SVrefine2PBcRDovetail_1320:HG4_Ill_SVrefine2DISCOVARDovetail_1869:HG4_Ill_MetaSV_2790:HG4_Ill_GATKHCSBGrefine_1731:HG4_Ill_Cortex_1950:HG3_Ill_Cortex_1999:HG2_PB_pbsv_2500:HG2_PB_SVrefine2PB10Xhap12_1882:HG2_PB_SVrefine2Falcon2Bionano_1039:HG2_PB_SVrefine2Falcon1plusDovetail_6492:HG2_PB_PB10Xdip_16741:HG2_Ill_manta_694:HG2_Ill_breakscan11_338:HG2_Ill_SpiralSDKrefine_9176:HG2_Ill_SVrefine2DISCOVARplusDovetail_7092:HG2_Ill_MetaSV_2699:HG2_Ill_GATKHCSBGrefine_1647:HG2_Ill_Cortex_4611:HG2_10X_allpass_390:HG2_10X_SVrefine210Xhap12_1903:HG4_PB_SVrefine2Falcon1Dovetail_1503:HG3_PB_SVrefine2Falcon1Dovetail_1558:HG2_Ill_tnscope_269:HG2_Ill_Spiral_162:HG4_PB_assemblyticsfalcon_14237;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1903:HG2_10X_allpass_390:HG2_Ill_Cortex_4611:HG2_Ill_GATKHCSBGrefine_1647:HG2_Ill_MetaSV_2699:HG2_Ill_SVrefine2DISCOVARplusDovetail_7092:HG2_Ill_SpiralSDKrefine_9176:HG2_Ill_breakscan11_338:HG2_Ill_manta_694:HG2_PB_PB10Xdip_16741:HG2_PB_SVrefine2Falcon1plusDovetail_6492:HG2_PB_SVrefine2Falcon2Bionano_1039:HG2_PB_SVrefine2PB10Xhap12_1882:HG2_PB_pbsv_2500:HG3_Ill_Cortex_1999:HG4_Ill_Cortex_1950:HG4_Ill_GATKHCSBGrefine_1731:HG4_Ill_MetaSV_2790:HG4_Ill_SVrefine2DISCOVARDovetail_1869:HG4_PB_SVrefine2PBcRDovetail_1320;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0356612;ClusterMaxSizeDiff=0.0356612;ClusterMaxEditDist=0.0356612;PBcalls=12;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=3;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-683;DistBack=-684;DistForward=53222;DistMin=-684;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:182856915-182857599;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2075.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:24:0|1:48:1:0:20:1|0:0:20:81:0:0/1:62:24:0/1:65:16:.:.:.
chr2	183315806	HG4_Ill_manta_602	TAAAAATATTTTAACTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAAGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_163:HG4_Ill_Krunchall_3595:HG3_Ill_Krunchall_3461:HG2_Ill_Krunchall_3439:HG4_Ill_Krunchall_3594:HG2_Ill_Krunchall_3438:HG4_PB_assemblyticsfalcon_14240:HG3_PB_assemblyticsfalcon_14475:HG2_PB_pbsv_2501:HG4_PB_pbsv_2512:HG4_Ill_MetaSV_2791:HG3_Ill_MetaSV_2843:HG2_Ill_tnscope_270:HG2_Ill_MetaSV_2700:HG4_PB_SVrefine2Falcon1Dovetail_1504:HG4_Ill_manta_602:HG4_Ill_GATKHCSBGrefine_1732:HG4_10X_allpass_448:HG3_PB_assemblyticsfalcon_14474:HG3_PB_SVrefine2PBcRDovetail_1284:HG3_PB_SVrefine2Falcon1Dovetail_1559:HG3_PB_HySA_3911:HG3_Ill_scalpel_2540:HG3_Ill_manta_557:HG3_Ill_SVrefine2DISCOVARDovetail_1835:HG3_Ill_GATKHCSBGrefine_1665:HG3_10X_allpass_486:HG2_PB_assemblyticsfalcon_14452:HG2_PB_SVrefine2Falcon2Bionano_1040:HG2_PB_SVrefine2Falcon1plusDovetail_6493:HG2_Ill_manta_695:HG2_Ill_SVrefine2DISCOVARplusDovetail_7094:HG2_Ill_GATKHCSBGrefine_1648:HG2_10X_SVrefine210Xhap12_1905:HG3_PB_pbsv_2496:HG4_Ill_Spiral_200:HG3_Ill_Spiral_2698;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1905:HG2_Ill_GATKHCSBGrefine_1648:HG2_Ill_SVrefine2DISCOVARplusDovetail_7094:HG2_Ill_manta_695:HG2_PB_SVrefine2Falcon1plusDovetail_6493:HG2_PB_SVrefine2Falcon2Bionano_1040:HG2_PB_assemblyticsfalcon_14452:HG3_10X_allpass_486:HG3_Ill_GATKHCSBGrefine_1665:HG3_Ill_SVrefine2DISCOVARDovetail_1835:HG3_Ill_manta_557:HG3_Ill_scalpel_2540:HG3_PB_HySA_3911:HG3_PB_SVrefine2Falcon1Dovetail_1559:HG3_PB_SVrefine2PBcRDovetail_1284:HG3_PB_assemblyticsfalcon_14474:HG4_10X_allpass_448:HG4_Ill_GATKHCSBGrefine_1732:HG4_Ill_manta_602:HG4_PB_SVrefine2Falcon1Dovetail_1504;NumExactMatchSVs=20;ClusterMaxShiftDist=0.100324;ClusterMaxSizeDiff=0.100324;ClusterMaxEditDist=0.100324;PBcalls=13;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=14;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=65299;DistForward=-299;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:183315807-183316137;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2076.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:41:0|1:39:5:1:34:./.:53:0:1:18:0/1:41:22:0/1:25:8:.:.:.
chr2	184249966	HG2_Ill_GATKHCSBGrefine_1649	TTGTTTATGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2702:HG2_PB_assemblyticsfalcon_14461:HG2_PB_assemblyticsPBcR_14070:HG4_PB_assemblyticsfalcon_14250:HG3_PB_assemblyticsfalcon_14484:HG4_PB_pbsv_2517:HG4_Ill_Krunchall_3606:HG3_Ill_Krunchall_3471:HG2_PB_pbsv_2507:HG2_Ill_Krunchall_3455:HG4_Ill_Spiral_201:HG3_Ill_Spiral_2709:HG3_PB_pbsv_2500:HG2_PB_HySA_4776:HG4_PB_HySA_3810:HG4_PB_SVrefine2PBcRDovetail_1324:HG4_PB_SVrefine2Falcon1Dovetail_1508:HG4_Ill_scalpel_2356:HG4_Ill_manta_606:HG4_Ill_SVrefine2DISCOVARDovetail_1874:HG4_Ill_GATKHCSBGrefine_1736:HG4_10X_allpass_450:HG3_PB_SVrefine2PBcRDovetail_1286:HG3_PB_SVrefine2Falcon1Dovetail_1562:HG3_Ill_scalpel_2549:HG3_Ill_manta_559:HG3_Ill_SVrefine2DISCOVARDovetail_1841:HG3_Ill_GATKHCSBGrefine_1669:HG3_10X_allpass_487:HG2_PB_SVrefine2PBcRplusDovetail_6030:HG2_PB_SVrefine2PB10Xhap12_1887:HG2_PB_SVrefine2Falcon2Bionano_1044:HG2_PB_SVrefine2Falcon1plusDovetail_6497:HG2_Ill_scalpel_2411:HG2_Ill_manta_698:HG2_Ill_breakscan11_339:HG2_Ill_SVrefine2DISCOVARplusDovetail_7101:HG2_Ill_GATKHCSBGrefine_1649:HG2_10X_allpass_391:HG2_10X_SVrefine210Xhap12_1909:HG4_Ill_MetaSV_2792:HG3_PB_HySA_3918:HG3_Ill_MetaSV_2844:HG2_Ill_tnscope_271;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1909:HG2_10X_allpass_391:HG2_Ill_GATKHCSBGrefine_1649:HG2_Ill_SVrefine2DISCOVARplusDovetail_7101:HG2_Ill_breakscan11_339:HG2_Ill_manta_698:HG2_Ill_scalpel_2411:HG2_PB_SVrefine2Falcon1plusDovetail_6497:HG2_PB_SVrefine2Falcon2Bionano_1044:HG2_PB_SVrefine2PB10Xhap12_1887:HG2_PB_SVrefine2PBcRplusDovetail_6030:HG3_10X_allpass_487:HG3_Ill_GATKHCSBGrefine_1669:HG3_Ill_SVrefine2DISCOVARDovetail_1841:HG3_Ill_manta_559:HG3_Ill_scalpel_2549:HG3_PB_SVrefine2Falcon1Dovetail_1562:HG3_PB_SVrefine2PBcRDovetail_1286:HG4_10X_allpass_450:HG4_Ill_GATKHCSBGrefine_1736:HG4_Ill_SVrefine2DISCOVARDovetail_1874:HG4_Ill_manta_606:HG4_Ill_scalpel_2356:HG4_PB_SVrefine2Falcon1Dovetail_1508:HG4_PB_SVrefine2PBcRDovetail_1324;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0861813;ClusterMaxSizeDiff=0.0861813;ClusterMaxEditDist=0.0861813;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-343;DistBack=30909;DistForward=15392;DistMin=15392;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:184249967-184250324;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2077.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:24:0:16:1/1:0:24:0:13:1/1:0:33:./.:1:10:.:.:.
chr2	184377663	HG2_Ill_Krunchall_3456	CTAGACACAGAGTGCTGATTGGTGCATTTTTACAGAGTGGTGATTGGTGCATTTACAATCCTT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3148:HG3_PB_pbsv_2502:HG4_PB_pbsv_2518:HG2_PB_pbsv_2509:HG4_PB_HySA_3811:HG2_PB_HySA_4777:HG4_Ill_svaba_3166:HG4_Ill_scalpel_2357:HG4_Ill_Krunchall_3607:HG4_Ill_GATKHC_4161:HG4_Ill_GATKHCSBGrefine_1737:HG4_Ill_250bpfermikitraw_3419:HG4_Ill_150bpfermikitraw_3297:HG3_Ill_svaba_3200:HG3_Ill_scalpel_2550:HG3_Ill_Krunchall_3472:HG3_Ill_GATKHC_4232:HG3_Ill_GATKHCSBGrefine_1670:HG3_Ill_250bpfermikitraw_3364:HG3_Ill_150bpfermikitraw_3250:HG2_Ill_svaba_3081:HG2_Ill_scalpel_2412:HG2_Ill_manta_699:HG2_Ill_Krunchall_3456:HG2_Ill_GATKHC_4104:HG2_Ill_GATKHCSBGrefine_1651:HG2_Ill_250bpfermikitraw_3391;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3148:HG4_Ill_svaba_3166:HG4_Ill_scalpel_2357:HG4_Ill_Krunchall_3607:HG4_Ill_GATKHC_4161:HG4_Ill_GATKHCSBGrefine_1737:HG4_Ill_250bpfermikitraw_3419:HG4_Ill_150bpfermikitraw_3297:HG3_Ill_svaba_3200:HG3_Ill_scalpel_2550:HG3_Ill_Krunchall_3472:HG3_Ill_GATKHC_4232:HG3_Ill_GATKHCSBGrefine_1670:HG3_Ill_250bpfermikitraw_3364:HG3_Ill_150bpfermikitraw_3250:HG2_Ill_svaba_3081:HG2_Ill_scalpel_2412:HG2_Ill_manta_699:HG2_Ill_Krunchall_3456:HG2_Ill_GATKHC_4104:HG2_Ill_GATKHCSBGrefine_1651:HG2_Ill_250bpfermikitraw_3391;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.0826446;PBcalls=5;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=72;DistForward=-59;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=152;REFWIDENED=2:184377604-184377817;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2078.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:0|1:31:2:3:27:1|0:0:19:33:0:0/1:25:11:./.:.:.:.:.:.
chr2	188123043	HG3_Ill_svaba_3221	CTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_1331:HG2_PB_HySA_4806:HG3_PB_assemblyticsfalcon_14504:HG4_PB_pbsv_2532:HG3_PB_pbsv_2514:HG2_PB_assemblyticsfalcon_14493:HG2_PB_SVrefine2Falcon1plusDovetail_6508:HG4_Ill_svaba_3187:HG4_Ill_GATKHC_4191:HG4_Ill_GATKHCSBGrefine_1748:HG4_Ill_150bpfermikitraw_3322:HG3_Ill_svaba_3221:HG3_Ill_GATKHC_4270:HG3_Ill_GATKHCSBGrefine_1683:HG3_Ill_250bpfermikitraw_3397:HG3_Ill_150bpfermikitraw_3285:HG3_PB_SVrefine2PBcRDovetail_1295:HG3_PB_HySA_3950:HG3_Ill_svaba_3220:HG3_Ill_manta_565:HG3_Ill_GATKHC_4269:HG3_Ill_GATKHCSBGrefine_1682:HG2_Ill_svaba_3099:HG2_Ill_manta_703:HG2_Ill_GATKHC_4136:HG2_Ill_GATKHCSBGrefine_1662:HG3_Ill_SVrefine2DISCOVARDovetail_1868:HG2_Ill_SVrefine2DISCOVARplusDovetail_7123:HG2_10X_SVrefine210Xhap12_1918:HG2_PB_pbsv_2521:HG4_Ill_SVrefine2DISCOVARDovetail_1892;NumClusterSVs=31;ExactMatchIDs=HG3_Ill_150bpfermikitraw_3285:HG3_Ill_250bpfermikitraw_3397:HG3_Ill_GATKHCSBGrefine_1683:HG3_Ill_GATKHC_4270:HG3_Ill_svaba_3221:HG4_Ill_150bpfermikitraw_3322:HG4_Ill_GATKHCSBGrefine_1748:HG4_Ill_GATKHC_4191:HG4_Ill_svaba_3187;NumExactMatchSVs=9;ClusterMaxShiftDist=0.292135;ClusterMaxSizeDiff=0.292135;ClusterMaxEditDist=0.362637;PBcalls=10;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=14;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-85;DistBack=-6;DistForward=2716;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=158;REFWIDENED=2:188122979-188123221;PctSeqSimilarity=0.871;PctSizeSimilarity=0.8416;PctRecOverlap=0.8039;SizeDiff=-16;StartDistance=20;EndDistance=4;GTMatch=0;TruScore=83;MatchId=2079.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:33:0|1:25:2:3:29:./.:7:0:6:13:0/1:30:17:./.:.:.:.:.:.
chr2	188215718	HG3_PB_SVrefine2PBcRDovetail_1296	TAAGAAATATGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAATCCGGCCTGGGCTAAACAGCGGGACTCCGTCTCAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_340:HG2_PB_assemblyticsfalcon_14495:HG4_PB_assemblyticsfalcon_14273:HG3_PB_assemblyticsfalcon_14506:HG4_Ill_Krunchall_3639:HG3_Ill_Krunchall_3506:HG2_Ill_Krunchall_3484:HG2_PB_HySA_4807:HG4_PB_pbsv_2533:HG2_PB_pbsv_2522:HG4_Ill_MetaSV_2796:HG2_Ill_tnscope_273:HG2_Ill_MetaSV_2706:HG4_PB_SVrefine2PBcRDovetail_1332:HG4_PB_SVrefine2Falcon1Dovetail_1516:HG4_PB_HySA_3836:HG4_Ill_scalpel_2375:HG4_Ill_manta_611:HG4_Ill_SVrefine2DISCOVARDovetail_1893:HG4_Ill_GATKHCSBGrefine_1749:HG3_PB_pbsv_2515:HG3_PB_SVrefine2PBcRDovetail_1296:HG3_PB_SVrefine2Falcon1Dovetail_1570:HG3_Ill_scalpel_2585:HG3_Ill_manta_566:HG3_Ill_SVrefine2DISCOVARDovetail_1869:HG3_Ill_GATKHCSBGrefine_1684:HG3_10X_allpass_491:HG2_PB_SVrefine2Falcon1plusDovetail_6509:HG2_Ill_scalpel_2434:HG2_Ill_manta_704:HG2_Ill_SVrefine2DISCOVARplusDovetail_7125:HG2_Ill_GATKHCSBGrefine_1663:HG2_10X_SVrefine210Xhap12_1919;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1919:HG2_Ill_GATKHCSBGrefine_1663:HG2_Ill_SVrefine2DISCOVARplusDovetail_7125:HG2_Ill_manta_704:HG2_Ill_scalpel_2434:HG2_PB_SVrefine2Falcon1plusDovetail_6509:HG3_10X_allpass_491:HG3_Ill_GATKHCSBGrefine_1684:HG3_Ill_SVrefine2DISCOVARDovetail_1869:HG3_Ill_manta_566:HG3_Ill_scalpel_2585:HG3_PB_SVrefine2Falcon1Dovetail_1570:HG3_PB_SVrefine2PBcRDovetail_1296:HG3_PB_pbsv_2515:HG4_Ill_GATKHCSBGrefine_1749:HG4_Ill_SVrefine2DISCOVARDovetail_1893:HG4_Ill_manta_611:HG4_Ill_scalpel_2375:HG4_PB_HySA_3836:HG4_PB_SVrefine2Falcon1Dovetail_1516:HG4_PB_SVrefine2PBcRDovetail_1332;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0760331;ClusterMaxSizeDiff=0.0760331;ClusterMaxEditDist=0.0760331;PBcalls=13;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=-307;DistForward=-293;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=2:188215719-188216037;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2080.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:39:./.:18:13:9:20:1|0:0:24:50:0:0/1:20:36:0/1:21:6:.:.:.
chr2	188505187	HG3_Ill_manta_567	GGTTTCTTCTTAAGAATTGATTAGACTCGAGTATTATATATGTTAATAAAATAATGAAAATCAAGACAATGGCTATACTGTGTCCCCATTGCATAGTGGAAAAGCAGTGTTTTGGCAGATAGGATAAAAACAAAATTATATAACTAATAGGTTTTGTTAAAGATGAAGAAAATATTTCTACAAAAGATAAAGCACAATCACAAAACTTTAAGTGGAGAATCTTAAAAATTTGGGGGGATAGATGGTATTTTTGGGAAAGGATTTATGCTGTCAAAAAATAGTTATGCTCAGCCTTCTGAATACATTTAATATTATTCTGTGTTGAGTAACTGAGTTGTGATGCAAATCTTTGA	ATGTTT	20	PASS	ClusterIDs=HG3_PB_pbsv_2518:HG3_Ill_GATKHCSBGrefine_1687:HG2_Ill_GATKHCSBGrefine_1665:HG2_PB_HySA_4810:HG2_Ill_tnscope_274:HG4_Ill_Cortex_1957:HG3_Ill_manta_567:HG3_Ill_Cortex_2003:HG2_PB_assemblyticsfalcon_14500:HG2_PB_assemblyticsPBcR_14099:HG2_PB_SVrefine2PBcRplusDovetail_6038:HG2_PB_SVrefine2Falcon1plusDovetail_6510:HG2_Ill_manta_705:HG2_Ill_Cortex_4625:HG2_10X_SVrefine210Xhap12_1921:HG2_PB_SVrefine2PB10Xhap12_1894:HG2_PB_PB10Xdip_16761:HG2_Ill_SpiralSDKrefine_9204:HG3_Ill_MetaSV_2851:HG2_Ill_MetaSV_2707:HG3_Ill_Spiral_2733:HG2_Ill_Spiral_166:HG2_PB_pbsv_2524:HG3_10X_allpass_493:HG2_10X_allpass_393:HG3_Ill_Krunchall_3509:HG2_Ill_Krunchall_3488;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1921:HG2_Ill_Cortex_4625:HG2_Ill_manta_705:HG2_PB_SVrefine2Falcon1plusDovetail_6510:HG2_PB_SVrefine2PBcRplusDovetail_6038:HG2_PB_assemblyticsPBcR_14099:HG2_PB_assemblyticsfalcon_14500:HG3_Ill_Cortex_2003:HG3_Ill_manta_567:HG4_Ill_Cortex_1957;NumExactMatchSVs=10;ClusterMaxShiftDist=0.145015;ClusterMaxSizeDiff=0.145015;ClusterMaxEditDist=0.145015;PBcalls=9;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-347;DistBack=-38;DistForward=29945;DistMin=-38;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:188505187-188505539;PctSeqSimilarity=0.9943;PctSizeSimilarity=0.9971;PctRecOverlap=0.9887;SizeDiff=-1;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2082.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:43:./.:20:8:5:22:0|1:51:0:0:23:0/1:47:23:0/1:26:6:.:.:.
chr2	188671887	HG2_PB_assemblyticsfalcon_14501	GAGGATACATACATATATATGTATGTATATAGAGAGAGTTATATTTGATAAAATAACCTCTTTT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_2536:HG2_PB_HySA_4812:HG2_PB_pbsv_2525:HG4_Ill_svaba_3189:HG4_Ill_manta_612:HG4_Ill_GATKHC_4194:HG4_Ill_GATKHCSBGrefine_1752:HG4_Ill_Cortex_1958:HG4_Ill_250bpfermikitraw_3445:HG4_Ill_150bpfermikitraw_3325:HG4_10X_allpass_454:HG3_PB_pbsv_2519:HG3_Ill_svaba_3226:HG3_Ill_manta_568:HG3_Ill_Krunchall_3512:HG3_Ill_GATKHC_4277:HG3_Ill_GATKHCSBGrefine_1688:HG3_Ill_Cortex_2004:HG3_Ill_250bpfermikitraw_3403:HG3_Ill_150bpfermikitraw_3291:HG2_PB_assemblyticsfalcon_14501:HG2_PB_assemblyticsPBcR_14102:HG2_Ill_svaba_3104:HG2_Ill_scalpel_2436:HG2_Ill_manta_706:HG2_Ill_Krunchall_3490:HG2_Ill_GATKHC_4143:HG2_Ill_GATKHCSBGrefine_1666:HG2_Ill_Cortex_4626:HG2_Ill_250bpfermikitraw_3423:HG2_Ill_150bpfermikitraw_3180:HG2_CG_vcfBeta_1528:HG4_PB_assemblyticsfalcon_14277:HG4_Ill_Krunchall_3641:HG2_Ill_breakscan11_341;NumClusterSVs=35;ExactMatchIDs=HG2_CG_vcfBeta_1528:HG2_Ill_150bpfermikitraw_3180:HG2_Ill_250bpfermikitraw_3423:HG2_Ill_Cortex_4626:HG2_Ill_GATKHCSBGrefine_1666:HG2_Ill_GATKHC_4143:HG2_Ill_Krunchall_3490:HG2_Ill_manta_706:HG2_Ill_scalpel_2436:HG2_Ill_svaba_3104:HG2_PB_assemblyticsPBcR_14102:HG2_PB_assemblyticsfalcon_14501:HG3_Ill_150bpfermikitraw_3291:HG3_Ill_250bpfermikitraw_3403:HG3_Ill_Cortex_2004:HG3_Ill_GATKHCSBGrefine_1688:HG3_Ill_GATKHC_4277:HG3_Ill_Krunchall_3512:HG3_Ill_manta_568:HG3_Ill_svaba_3226:HG3_PB_pbsv_2519:HG4_10X_allpass_454:HG4_Ill_150bpfermikitraw_3325:HG4_Ill_250bpfermikitraw_3445:HG4_Ill_Cortex_1958:HG4_Ill_GATKHCSBGrefine_1752:HG4_Ill_GATKHC_4194:HG4_Ill_manta_612:HG4_Ill_svaba_3189;NumExactMatchSVs=29;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.0629921;PBcalls=7;Illcalls=26;TenXcalls=1;CGcalls=1;PBexactcalls=3;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=1;HG2count=15;HG3count=9;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-63;DistBack=73;DistForward=2317;DistMin=73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:188671886-188671952;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2083.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:65:1/1:0:10:0:13:1/1:0:24:0:34:1/1:0:29:./.:.:.:.:.:.
chr2	191504095	HG4_Ill_GATKHCSBGrefine_1764	ATTTTGTTGACCTCCTGGTTTTTGTTGCCCTCTGCAAACAAGTGGATAAAAACAATTTTGGGACAGATGACATTAAGTGCTTGACACATACTTTTTAGCTCGCAGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1935:HG4_Ill_Krunchall_3670:HG3_Ill_Krunchall_3540:HG2_Ill_Krunchall_3509:HG4_PB_assemblyticsfalcon_14295:HG3_PB_pbsv_2532:HG2_PB_pbsv_2538:HG4_PB_pbsv_2552:HG3_PB_HySA_3976:HG2_PB_HySA_4840:HG4_PB_SVrefine2PBcRDovetail_1340:HG4_PB_SVrefine2Falcon1Dovetail_1526:HG4_Ill_svaba_3211:HG4_Ill_manta_618:HG4_Ill_SVrefine2DISCOVARDovetail_1906:HG4_Ill_GATKHC_4216:HG4_Ill_GATKHCSBGrefine_1764:HG4_10X_allpass_455:HG3_PB_SVrefine2PBcRDovetail_1305:HG3_Ill_svaba_3245:HG3_Ill_manta_571:HG3_Ill_SVrefine2DISCOVARDovetail_1884:HG3_Ill_GATKHC_4300:HG3_Ill_GATKHCSBGrefine_1702:HG2_PB_assemblyticsfalcon_14521:HG2_PB_assemblyticsPBcR_14120:HG2_PB_SVrefine2PBcRplusDovetail_6050:HG2_PB_SVrefine2Falcon2Bionano_1062:HG2_PB_SVrefine2Falcon1plusDovetail_6522:HG2_Ill_svaba_3123:HG2_Ill_scalpel_2450:HG2_Ill_manta_713:HG2_Ill_SVrefine2DISCOVARplusDovetail_7140:HG2_Ill_GATKHC_4161:HG2_Ill_GATKHCSBGrefine_1679:HG2_Ill_250bpfermikitraw_3448:HG2_Ill_150bpfermikitraw_3201;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1935:HG4_PB_SVrefine2PBcRDovetail_1340:HG4_PB_SVrefine2Falcon1Dovetail_1526:HG4_Ill_svaba_3211:HG4_Ill_manta_618:HG4_Ill_SVrefine2DISCOVARDovetail_1906:HG4_Ill_GATKHC_4216:HG4_Ill_GATKHCSBGrefine_1764:HG4_10X_allpass_455:HG3_PB_SVrefine2PBcRDovetail_1305:HG3_Ill_svaba_3245:HG3_Ill_manta_571:HG3_Ill_SVrefine2DISCOVARDovetail_1884:HG3_Ill_GATKHC_4300:HG3_Ill_GATKHCSBGrefine_1702:HG2_PB_assemblyticsfalcon_14521:HG2_PB_assemblyticsPBcR_14120:HG2_PB_SVrefine2PBcRplusDovetail_6050:HG2_PB_SVrefine2Falcon2Bionano_1062:HG2_PB_SVrefine2Falcon1plusDovetail_6522:HG2_Ill_svaba_3123:HG2_Ill_scalpel_2450:HG2_Ill_manta_713:HG2_Ill_SVrefine2DISCOVARplusDovetail_7140:HG2_Ill_GATKHC_4161:HG2_Ill_GATKHCSBGrefine_1679:HG2_Ill_250bpfermikitraw_3448:HG2_Ill_150bpfermikitraw_3201;NumExactMatchSVs=28;ClusterMaxShiftDist=0.028436;ClusterMaxSizeDiff=0.028436;ClusterMaxEditDist=0.0478469;PBcalls=14;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-105;DistBack=54450;DistForward=1312;DistMin=1312;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=97;REFWIDENED=2:191504052-191504253;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2085.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:0:9:2:11:./.:0:18:1:12:1/1:0:43:./.:.:.:.:.:.
chr2	191635470	HG2_Ill_manta_715	GATGTGCATGATGCTTATCTATGGGATGTCCCTCGAGCATGCAGGCACTGCTGC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3203:HG2_PB_HySA_4842:HG2_Ill_Krunchall_3511:HG3_Ill_svaba_3249:HG3_Ill_scalpel_2605:HG3_Ill_manta_573:HG3_Ill_SVrefine2DISCOVARDovetail_1886:HG3_Ill_Krunchall_3542:HG3_Ill_GATKHC_4303:HG3_Ill_GATKHCSBGrefine_1704:HG3_Ill_Cortex_2009:HG3_Ill_250bpfermikitraw_3430:HG3_Ill_150bpfermikitraw_3314:HG2_PB_pbsv_2540:HG2_Ill_svaba_3126:HG2_Ill_scalpel_2451:HG2_Ill_manta_715:HG2_Ill_breakscan11_342:HG2_Ill_SpiralSDKrefine_9221:HG2_Ill_Krunchall_3510:HG2_Ill_GATKHC_4162:HG2_Ill_GATKHCSBGrefine_1681:HG2_Ill_Cortex_4633:HG2_Ill_250bpfermikitraw_3450;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3203:HG3_Ill_svaba_3249:HG3_Ill_scalpel_2605:HG3_Ill_manta_573:HG3_Ill_SVrefine2DISCOVARDovetail_1886:HG3_Ill_Krunchall_3542:HG3_Ill_GATKHC_4303:HG3_Ill_GATKHCSBGrefine_1704:HG3_Ill_Cortex_2009:HG3_Ill_250bpfermikitraw_3430:HG3_Ill_150bpfermikitraw_3314:HG2_PB_pbsv_2540:HG2_Ill_svaba_3126:HG2_Ill_scalpel_2451:HG2_Ill_manta_715:HG2_Ill_breakscan11_342:HG2_Ill_SpiralSDKrefine_9221:HG2_Ill_Krunchall_3510:HG2_Ill_GATKHC_4162:HG2_Ill_GATKHCSBGrefine_1681:HG2_Ill_Cortex_4633:HG2_Ill_250bpfermikitraw_3450;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0186916;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0373832;PBcalls=2;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-53;DistBack=-136;DistForward=-50;DistMin=-136;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:191635471-191635525;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2086.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:1|0:1:29:27:1:0|1:30:0:0:34:0/1:37:31:./.:.:.:.:.:.
chr2	192317766	HG3_Ill_150bpfermikitraw_3318	TATATATATATTTCTATATATGTAGAAATATATATATTTCTATATATGTAGAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_2543:HG2_PB_HySA_4849:HG4_PB_pbsv_2556:HG4_PB_assemblyticsfalcon_14302:HG3_PB_pbsv_2536:HG3_PB_HySA_3980:HG4_PB_SVrefine2PBcRDovetail_1344:HG4_Ill_svaba_3217:HG4_Ill_manta_621:HG4_Ill_SVrefine2DISCOVARDovetail_1913:HG4_Ill_Krunchall_3676:HG4_Ill_GATKHC_4224:HG4_Ill_GATKHCSBGrefine_1767:HG4_Ill_250bpfermikitraw_3474:HG4_Ill_150bpfermikitraw_3353:HG3_PB_SVrefine2PBcRDovetail_1309:HG3_PB_SVrefine2Falcon1Dovetail_1582:HG3_Ill_svaba_3254:HG3_Ill_manta_575:HG3_Ill_SVrefine2DISCOVARDovetail_1892:HG3_Ill_Krunchall_3546:HG3_Ill_GATKHC_4307:HG3_Ill_GATKHCSBGrefine_1706:HG3_Ill_250bpfermikitraw_3434:HG3_Ill_150bpfermikitraw_3318:HG2_PB_SVrefine2PBcRplusDovetail_6054:HG2_PB_SVrefine2PB10Xhap12_1909:HG2_PB_SVrefine2Falcon2Bionano_1065:HG2_PB_SVrefine2Falcon1plusDovetail_6526:HG2_Ill_svaba_3131:HG2_Ill_manta_717:HG2_Ill_SpiralSDKrefine_9224:HG2_Ill_SVrefine2DISCOVARplusDovetail_7148:HG2_Ill_Krunchall_3515:HG2_Ill_GATKHC_4167:HG2_Ill_GATKHCSBGrefine_1683:HG2_Ill_250bpfermikitraw_3455:HG2_Ill_150bpfermikitraw_3208:HG2_10X_SVrefine210Xhap12_1939:HG4_PB_HySA_3866;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1939:HG2_Ill_150bpfermikitraw_3208:HG2_Ill_250bpfermikitraw_3455:HG2_Ill_GATKHCSBGrefine_1683:HG2_Ill_GATKHC_4167:HG2_Ill_Krunchall_3515:HG2_Ill_SVrefine2DISCOVARplusDovetail_7148:HG2_Ill_SpiralSDKrefine_9224:HG2_Ill_manta_717:HG2_Ill_svaba_3131:HG2_PB_SVrefine2Falcon1plusDovetail_6526:HG2_PB_SVrefine2Falcon2Bionano_1065:HG2_PB_SVrefine2PB10Xhap12_1909:HG2_PB_SVrefine2PBcRplusDovetail_6054:HG3_Ill_150bpfermikitraw_3318:HG3_Ill_250bpfermikitraw_3434:HG3_Ill_GATKHCSBGrefine_1706:HG3_Ill_GATKHC_4307:HG3_Ill_Krunchall_3546:HG3_Ill_SVrefine2DISCOVARDovetail_1892:HG3_Ill_manta_575:HG3_Ill_svaba_3254:HG3_PB_SVrefine2Falcon1Dovetail_1582:HG3_PB_SVrefine2PBcRDovetail_1309:HG4_Ill_150bpfermikitraw_3353:HG4_Ill_250bpfermikitraw_3474:HG4_Ill_GATKHCSBGrefine_1767:HG4_Ill_GATKHC_4224:HG4_Ill_Krunchall_3676:HG4_Ill_SVrefine2DISCOVARDovetail_1913:HG4_Ill_manta_621:HG4_Ill_svaba_3217:HG4_PB_SVrefine2PBcRDovetail_1344;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0943396;PBcalls=14;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=54822;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=94;REFWIDENED=2:192317767-192317912;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2087.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:0:26:2:11:./.:0:7:1:9:1/1:0:57:./.:.:.:.:.:.
chr2	192559396	HG2_PB_SVrefine2PB10Xhap12_1910	GAAAAAATATGAAAGTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1940:HG4_Ill_MetaSV_2800:HG2_Ill_MetaSV_2711:HG4_PB_pbsv_2557:HG4_Ill_manta_622:HG4_Ill_GATKHCSBGrefine_1768:HG2_PB_pbsv_2544:HG2_Ill_manta_718:HG2_Ill_SpiralSDKrefine_9227:HG2_Ill_GATKHCSBGrefine_1684:HG2_10X_allpass_396:HG2_Ill_tnscope_275:HG4_PB_SVrefine2PBcRDovetail_1345:HG4_PB_SVrefine2Falcon1Dovetail_1529:HG3_PB_SVrefine2Falcon1Dovetail_1583:HG2_PB_SVrefine2PBcRplusDovetail_6055:HG2_PB_SVrefine2PB10Xhap12_1910:HG2_PB_SVrefine2Falcon2Bionano_1066:HG2_PB_SVrefine2Falcon1plusDovetail_6527;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1940:HG4_PB_SVrefine2PBcRDovetail_1345:HG4_PB_SVrefine2Falcon1Dovetail_1529:HG3_PB_SVrefine2Falcon1Dovetail_1583:HG2_PB_SVrefine2PBcRplusDovetail_6055:HG2_PB_SVrefine2PB10Xhap12_1910:HG2_PB_SVrefine2Falcon2Bionano_1066:HG2_PB_SVrefine2Falcon1plusDovetail_6527;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0030349;ClusterMaxSizeDiff=0.0030349;ClusterMaxEditDist=0.0060698;PBcalls=9;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-328;DistBack=4230;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=327;REFWIDENED=2:192559397-192560051;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9787;SizeDiff=0;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=99;MatchId=2088.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:52:0|1:33:0:0:47:1|0:0:22:24:0:0/1:35:25:0/1:17:7:.:.:.
chr2	192562188	HG2_PB_SVrefine2PB10Xhap12_1911	TAAAAAAAACATGTAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_4855:HG2_10X_allpass_397:HG2_Ill_Krunchall_3517:HG2_PB_pbsv_2545:HG3_PB_SVrefine2Falcon1Dovetail_1584:HG4_PB_SVrefine2Falcon1Dovetail_1530:HG4_Ill_MetaSV_2801:HG2_Ill_tnscope_276:HG2_Ill_MetaSV_2712:HG4_PB_pbsv_2558:HG4_PB_SVrefine2PBcRDovetail_1346:HG4_Ill_SVrefine2DISCOVARDovetail_1914:HG4_Ill_GATKHCSBGrefine_1769:HG2_PB_SVrefine2PBcRplusDovetail_6056:HG2_PB_SVrefine2PB10Xhap12_1911:HG2_PB_SVrefine2Falcon2Bionano_1067:HG2_PB_SVrefine2Falcon1plusDovetail_6528:HG2_Ill_manta_719:HG2_Ill_breakscan11_344:HG2_Ill_GATKHCSBGrefine_1685:HG2_10X_SVrefine210Xhap12_1941:HG4_PB_HySA_3870;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1941:HG2_Ill_GATKHCSBGrefine_1685:HG2_Ill_breakscan11_344:HG2_Ill_manta_719:HG2_PB_SVrefine2Falcon1plusDovetail_6528:HG2_PB_SVrefine2Falcon2Bionano_1067:HG2_PB_SVrefine2PB10Xhap12_1911:HG2_PB_SVrefine2PBcRplusDovetail_6056:HG4_Ill_GATKHCSBGrefine_1769:HG4_Ill_SVrefine2DISCOVARDovetail_1914:HG4_PB_SVrefine2PBcRDovetail_1346:HG4_PB_pbsv_2558;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0821918;ClusterMaxSizeDiff=0.0821918;ClusterMaxEditDist=0.0821918;PBcalls=11;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=-337;DistForward=1465;DistMin=-337;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=2:192562189-192562540;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2089.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:34:0|1:36:1:1:31:1|0:1:28:36:1:0/1:30:26:0/1:17:7:.:.:.
chr2	193355404	HG3_Ill_scalpel_2612	ACAAATCTTGATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1946:HG4_PB_pbsv_2564:HG2_PB_pbsv_2553:HG3_PB_assemblyticsfalcon_14549:HG4_PB_HySA_3879:HG4_Ill_Krunchall_3689:HG3_Ill_Krunchall_3556:HG2_Ill_Krunchall_3529:HG2_PB_assemblyticsfalcon_14540:HG2_PB_assemblyticsPBcR_14139:HG4_PB_HySA_3878:HG2_PB_HySA_4865:HG3_Ill_MetaSV_2853:HG2_Ill_MetaSV_2713:HG4_PB_assemblyticsfalcon_14316:HG4_PB_SVrefine2Falcon1Dovetail_1534:HG4_Ill_svaba_3222:HG4_Ill_scalpel_2394:HG4_Ill_manta_625:HG4_Ill_GATKHCSBGrefine_1773:HG4_10X_allpass_458:HG3_PB_pbsv_2546:HG3_Ill_svaba_3261:HG3_Ill_scalpel_2612:HG3_Ill_manta_576:HG3_Ill_GATKHCSBGrefine_1711:HG3_10X_allpass_496:HG2_Ill_svaba_3138:HG2_Ill_scalpel_2461:HG2_Ill_manta_721:HG2_Ill_GATKHCSBGrefine_1691:HG2_10X_allpass_398:HG3_Ill_Spiral_2761:HG2_Ill_Spiral_168:HG4_Ill_MetaSV_2802:HG2_Ill_tnscope_277:HG4_PB_SVrefine2PBcRDovetail_1349:HG4_Ill_SVrefine2DISCOVARDovetail_1916:HG3_PB_SVrefine2Falcon1Dovetail_1588:HG3_Ill_SVrefine2DISCOVARDovetail_1895:HG2_PB_SVrefine2PBcRplusDovetail_6060:HG2_PB_SVrefine2Falcon2Bionano_1071:HG2_PB_SVrefine2Falcon1plusDovetail_6533:HG2_Ill_breakscan11_345:HG2_Ill_SVrefine2DISCOVARplusDovetail_7151;NumClusterSVs=45;ExactMatchIDs=HG2_10X_allpass_398:HG2_Ill_GATKHCSBGrefine_1691:HG2_Ill_manta_721:HG2_Ill_scalpel_2461:HG2_Ill_svaba_3138:HG3_10X_allpass_496:HG3_Ill_GATKHCSBGrefine_1711:HG3_Ill_manta_576:HG3_Ill_scalpel_2612:HG3_Ill_svaba_3261:HG3_PB_pbsv_2546:HG4_10X_allpass_458:HG4_Ill_GATKHCSBGrefine_1773:HG4_Ill_manta_625:HG4_Ill_scalpel_2394:HG4_Ill_svaba_3222:HG4_PB_SVrefine2Falcon1Dovetail_1534:HG4_PB_assemblyticsfalcon_14316;NumExactMatchSVs=18;ClusterMaxShiftDist=0.110368;ClusterMaxSizeDiff=0.110368;ClusterMaxEditDist=0.110368;PBcalls=16;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-304;DistBack=31560;DistForward=1101;DistMin=1101;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:193355400-193355718;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2090.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:75:1/1:0:37:1:12:1/1:0:31:0:36:1/1:0:45:./.:1:17:.:.:.
chr2	194398493	HG2_PB_SVrefine2Falcon2Bionano_1073	TAAGATATTTCTCATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_169:HG3_10X_allpass_497:HG2_10X_allpass_399:HG4_PB_assemblyticsfalcon_14327:HG2_PB_assemblyticsfalcon_14552:HG2_PB_assemblyticsPBcR_14151:HG3_Ill_Krunchall_3565:HG3_PB_pbsv_2549:HG2_PB_SVrefine2PB10Xhap12_1915:HG2_PB_pbsv_2556:HG3_Ill_MetaSV_2854:HG2_Ill_tnscope_278:HG2_Ill_MetaSV_2715:HG4_PB_SVrefine2Falcon1Dovetail_1535:HG3_PB_SVrefine2Falcon1Dovetail_1589:HG3_Ill_manta_580:HG3_Ill_SVrefine2DISCOVARDovetail_1900:HG3_Ill_GATKHCSBGrefine_1713:HG2_PB_SVrefine2PBcRplusDovetail_6062:HG2_PB_SVrefine2Falcon2Bionano_1073:HG2_PB_SVrefine2Falcon1plusDovetail_6535:HG2_Ill_manta_724:HG2_Ill_breakscan11_346:HG2_Ill_GATKHCSBGrefine_1694:HG2_10X_SVrefine210Xhap12_1950:HG3_Ill_Spiral_2769;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1950:HG2_Ill_GATKHCSBGrefine_1694:HG2_Ill_breakscan11_346:HG2_Ill_manta_724:HG2_PB_SVrefine2Falcon1plusDovetail_6535:HG2_PB_SVrefine2Falcon2Bionano_1073:HG2_PB_SVrefine2PBcRplusDovetail_6062:HG3_Ill_GATKHCSBGrefine_1713:HG3_Ill_SVrefine2DISCOVARDovetail_1900:HG3_Ill_manta_580:HG3_PB_SVrefine2Falcon1Dovetail_1589:HG4_PB_SVrefine2Falcon1Dovetail_1535;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0868263;ClusterMaxSizeDiff=0.0868263;ClusterMaxEditDist=0.0868263;PBcalls=11;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-340;DistBack=10767;DistForward=6492;DistMin=6492;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:194398494-194398848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2091.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:57:0|1:25:0:5:49:0|1:44:0:0:20:0/1:33:24:0/1:24:7:.:.:.
chr2	194689501	HG2_PB_SVrefine2PBcRplusDovetail_6063	TGAACTCTGACAAATAAGCAGAAAGCAAAGAATCATCAGACACTTGTGCAAAGTGTCTGTCAGGAAAGATATAGAGATACTGTCATGTGTAGGAAAGACACATTTTTGTGGGAAGAAGAAAAAATTCAAAACTATCATTAATATTATTTGAAAGAAAAATGCTACAGATGGAACAAAACTGAGTATTATAAAGGTGAATTATTCAAAGAACAAAATTGCTTTAGAATATTAAAGTATTTTTAAAACTGTGATGAAGCATATGAAAAGATACATGTTCCACTTCCTCATATGTAACCAGGGAAATGCAAATTTTTAAAAAATGAGATACCACCACACACCTATTACAATAGCCAAAATACAGAACGCTGACAATACCAAATAATGGAAAGGATTTGGAGCAATAGGAACTCTAATTTATTGCCAGTTATTTTATTATTTATTAAATAAAAAATTATACAGAAATTTTGGAAGACCATTTTGTGGTTTATTAGAACACAGAATGTATCCCTATCATGTTTTCCAGTAATCGTGTTCCTTGGTATTTACCCAAAGGAGTTAAAAGCATATCCACCTAAGATCCTGCACACTGCTATTCATAGTGGCTTTGTTCATAATTACCAAACTTGGAAGCCACCAAGATGTCTTTCAGTAGGTGAGTGAATAAACAAACTGTGGTACATGCAGACTATGAAATATTATTCAGTGCTAAAAAGAAATGAGCAACCAAGTCATGAAAAGACATGAAGAAACCTCAAATGCGTATTACTAAGTATAAAAAGTCAATCTGAAAAGGCTAAATATTGTATGAGTCCAACGATATGACACTCTGAACAATGCAAAACTATAGAGACAGTAAAAATATTAGGATTAGTGGTTGCCAGGGGGAGGATGTGAGTGGGATAAATAGAATATACAGAATTTTTAGGGCACTGGAAATTCTCTGTATGATACTATAATGTTCAATACATGTCATTTTGCATTGTCCAAACCCACAGAATATGCAGGAAGAGTGAACACTAATGTAAACTATAGAGTCTGGGTGGTAAGGATGTGCCAATTATAGTTTCATCAATTGTAACAAATACAACATTGGCAGAGATGTTGATAACGGCGGGGGGTGCTACTCTGGTGTAGAGGGAAGGAGTATATGGGAAATCTCTGTAGCGTCCTCCAATTTTGCTTTGAACCTACAACTGCTCTAAAAAAGTTTTTTTTAAAAAATCATAGGAAAAAGAAAATAAGACAACAACAAAAACTATAAAGTTTAATAGTTGAGGAAATGTCCTATAAAATAGCGCAAACAAAACACAGAAGTTAAAGGAAATAAAATTCAAAGTCTACGCCAGAAGATATACCTGAATAATATTCCTTGCAAAAAGCAAAACCAGAAGCTGAGTGCTATAAACTATAAAATAATTCAAGAAAATTTCCCAAAATTAAAAATTAGAATATCCAGATTTAAATGAGTCACTCAATACGAAATGTAGAATTCCTTGAATATCTTAATAACCTGAGCATATGGAGAAATTTAAACAATTCATGCCAAGTTTTCAATCAGAGTAGTAATGATTTTACAGAAAAGTGAGAAAAAATAAGTAGGTTTACTTCCAGTGAAAATAATCTATATAAATCACCTATAAATAGCATTTACAAAGTCCTAAAAATATAACTATCTGACATTAATCTTTTAAATGACAATATAATAAAGTCAGGAATTCGATAGGATGGAAAACATGATTATTTTGAAAGGATGATAGAATACAGTGGTACTGACTGGGAGCGCTGGCTCACACCTGTAATCTCAGCATTTAGGGAGGCCAGCGCGGGTGGATCACAGGAGGTCAGGAGATCGAGACCAGCCTGGACAACATGGTGAAATCCCATCTCTACTAAAAATACAAAATCAGCTGGATGTGGTGGCATATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGTGGGGAGCCAAGATTGCACCATTGCACTCCAGCCTGGGCAAAAAGAGCAAAATTCCATCTCAAATAATAGTAAAAATACAGTAGTACATTTTCATATCCTAGTGTTAATTTCATAGCTAAAGCTAAATAATGAAAATCAAGAAGTAGTGATGTAAGTACAAGCATATAACTGTTTTAAAAAAAGATAAGTACTTAGGATGGTTTCAGGGTTGCTGGCATAGACACTCGGGTGGATTGTGATGTTATTCACAGAAGGGGAAACACCAAAGAAAAGGAGCATATTGGGGCTGTGGGAGAGAGGACGTGAAAATGAGGAATGTGATTTAATTGTATTAAGTTTGCAATGCTTCCAGGTAATGCAAGCAGAAATAGAAGCTGTTGAAGTTAACCACTCCATAATAAGTTGTTAAAGTTATAACATATATTTGAGAGTTATCAACATATAGCTTATGATCAAAGCCTGTAGTTGATTTCCAGGGAGGATTTTATGGAAGGAGAAAAGAAGAGAACCTTGGACTGAATGCTGTGAAATAAAGTGTCATAGATATTCTGAAAAGGAGTCTAAAAGAGGTCAGTGGAAAACAAGGCACAAACAATTTCTCAGAGGCCAAAGGAAGTGAGTGATCCAAAAAGCAAGATGTTTTTACTTGGTATTTTGAAAGCAACCTTTTTCACTTTCTACTGTTCATCCGACTGATTATACATTTTCTGATTTTCTGTTCTACTCTTCCTGTGTGATATGACTGAAAGGAAAATAATTTATGTTTTAGTCACCTCTCTGACCTCAGTGCCTAAAACAATGAGGAGTGACAGGAAGATGCAATTAATAAATTAACTGAAGGTTGCTGGGAGCAATGACTCACACCTGTAATCCCAGCACTTTGGGAGGTCGAGGAGGGTGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCTGAGATAGTGAAACCCCGTCTCTATTAAAAAGACAAAAATTAGCCTGGCACAGTGGCAGGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTAGAGTGAGTCAAGATCTCACCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCTTGTCTCAAAATAAATAAATAAAATAAAATAAATTAAATTAACTGAAGGTTAATCCTATTTTTAACATATTGTGTCTCCACAAATTTGTTAGAAAACCTATAATATGCACAATTGGTTTAATTGTTCAATACTATTAATATTATTCATTAAATATATTTAATATAATTAACTAAAGCTAATGTGGACTCAAGTACTAAGTGCCTTTTGGTTAAAGCTCTCTTCAAAATCTCATTCTTAAAAATGTCCTATAGTTCTACCATCAATTCACCAGGGTAATCAGCACTTTTACCTGTTTTCAAAGTACATTTCTAATGATAAAATGGAAAAAAAATACATAAAGTATTATAAAATATTTAACTTTCAGTTTCAATAAAGGAATCATTACATAAAACTCAAAAGCCCTCAGCTTCCCTATCCTTTGCAACTATTAATCTATTTTCTATCCCTATAATTTTGTCATGTTAAGAATGTTATATAAGTGGAATACTATTATCTGTGATTTTTTGAGATTGACTTTTTTACTCAACATAATAGCCTTGAGATCATCCAAATTTTTGTATGTCAGTAGCTCATTACTTTTTATTGCTGAGTAGTATTCCATGGTATAAATGCACCACAGTTTGTTTAACCATTCACCTATTAAGAGAAATTTTGGTTGTTTCCAGTTTTAGTCTATAATATGTAAAGCTTCTATGAGCAATAAAACTATTGTGTAAAGGTCTTTGTGTGGACAAGAGTCATATTTCTCTGGCCTAAAGGCCTAACAGTGCAATTACTGGGCCATATTGCAAGTGCATGCTTAACTTAAAACTAATTTCCTGGATCTATTCATTTTGATAAATTTTCTTTGAGCACTTGAAACACATGCTACTTTATTCTGTCCCCAAAGGTCTCAAATAAAAATTTCACTGTTACTTAAATTGTTTTTTTCCCCTACGTGAAAGGTATAATTTCTCTCACTAATTTCAGGATTTGTCTTTGTCATTAGTTTCCAGAAGTTTGACTCTGATGTCTTTTGATTTGGGCTTATAGTCCTGCATTATTTACCAATGGGGGCATATTCTGAGAAATGTGTCATTAGGTGATTTCATGATTGTATCAACACCATGGAGTGTACTAACACAAACCTAGACGGTATAGCCTACCACACATCTGGGGTATGTGGTATAGTCCATTGCTCCTCAGCTACAAACTTGTACAACATGTTATTGTACTAAATGCTGTAGGCAACTGTAACACAATGGTAAGTATTTGTGTATGTAAACATAGAAAAGGGAGAGCAAAAATTGATTTTTTAATCTTACGAGGTCATGATTGTATACGTGGTTCGTTGTTGACAAAAACATCTTTACGCTTGACTGTATTTGAGTTTATTCGGCTTGGAATTCATTCAGCTTCTTGAATCTGTGGTTTTATGCTTCTCTGTCAAATTTCCAAAAAAAGTTGTAAGTAATTACCTTTTACTTCATAGTAAACTCCATGAACTATGTTGACACACAGATATAGTGTTTTTTTTCCTAGTAACACAGTGATTGAGTTTCTTCTCATTTTTCTAATTTTTCTCTGTTGTGTATATAATCTTATTGTATCTTCACATTTGTTAATTTTTGCCTTTGTTCTTTACGTTTGTGTTGAGCCCACACAATGAAGATTTTCTTCTTTTTCTTCTTCCAGTAATTATATTTTTCACTTCTAAAATTTCTGTTTGGTTCCTTTTAACATATTTTTTTCTCTGCTGATACTCTGCTTCTTTGATGTGATTTATTGTCTTTCCATTTGTTGCAAGCACATTTATAATTGCTCATTGAAGCATTTTTATAATGGCTGCTTTAAAATCATTGTCAGATAATTCTAATATATGTGTCACCTTATTGTTGGGAGTTATTGATTGTCTTCCCCATTCAAGGTGAGGTCTTTTTTCTTAATATGATGAGTGATTTTAGAGTGTAACCTGAAATTTTGTGTGAATTATTTTATGATGCTCTAGATATTATTGCAATCTTGTGTTTTAAAAGATCTTTCCTAACACTACTCTATTTTTAGGAGGGGGTTGTTCTTTCCTTATTCGCAGGTGAAAGTTCAAGTCCAGGTTTTCCATTTGGCCTCCATTGACCCAAGTTCTGCATTTGGCCTCTACTTGATCTCCATTGACCTAGAGGGGCTTCTTATTAATGCTGGGTGGGATTCAGAATTTAGGTTTGCCCTATTAGGTTTCCACTGATATTATTCTTGCTGTGAGTGAGAAGTGCTCCTTTTTCTTGCTTCCATGTGGCCTCCAATGACACCACAGAGGGGTGATGAATAGTGTTGAAGATACGGAATCTCCACTAGCTACTCTGACACCATCCCACTAAGGAGTAGAAGGTGCATTTTGTTATCATTGGTGAAGATGGCAATGCCATGTACCCACCTGGTCTCCAATGATGTAAAGTGAAGGAGGTCTTTGTACAGAGTAACAAAGTAGCATGAAAATCCTACTCCAAATTGGGCATTTATTGACATTACAGAAATGGCCTCTTAGAAGCCTTGAGAGTAGAAGGCTCCAGGATCTTCACTCATCATTTGCCGGGAAGGGTGGAAGTATGAAGAGCCACAGCTTTATCTGTGGTATTTGGATGGAAATAAATAAATATTATTGGAAAGCTTTCTGACTTGCTAGGCAGGCCCATTCTTAGTCCTTGGGCTAGAGAGAGTAAAATTTTTTAGAGCTTTGTTTTTGTGTGTTCATTGGTATTTTCAGATTGCCAGCTTCTCCAATCTTTACTTTGGCTGGGATATACAGGGCAAAAAGAAAACTCAGAAACCTTACCACTGAATTGTTCTTTAGGTCCCAAGGTCTCCTATAGCTTTCAAAGTCTTATTAAATTTGTTTTACATATAATGCACACGGTTTTAGCTGTATTTAGTAAAAGAAACAGAGAAATATACATCAGTTCTATCTTTCCAGAAGTAGAAGTCTCAAAAAGCTTTTGAATATAGCATTTTATTTTTTTTTAAATTATACTTTAAGTTCTAGGGTACATGAGCACAATGTGCAGTTTGGTACATATGTATACATCTGCCACGTTGGTGTGCTGCACCCATTAACTCGTCATTTACAGTAGGTATATCTCCTAATGTCATGCCTCCCCCCTCCCCCAACCCCATGACAGGCCCCAGTGTGTGACATTCCCCATCATGTGTCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGTGATGTTTGGTTTTCTGTCCTTACGATAGTTTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCTACAAAGGACATGAACTCATACTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCGAGTTTATCATTGATGGACATTTGGGTTTGTTCCAAGTCTTTGATATTGTGAATAGTGCTACAGTAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAATCCTATGGGTATATACCCAGTAATGGGATGTCTGGGTCAAATGGTATTTCTAGTTCTAGATCCTTGAGGAATCTCCACACTGTCTTCCACAATGGTTGAACTACTTTACAGTCCCACCAACAGTGTAAAAGTCTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTCTGGTTTTGATTTGAATTTCTCTGATGGCCAGTGATAATGAGCATTTTTTCATTTGTGTGTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTCGCCCACTTTTTGATGGGGTTGTTTGATTTTTTTTCTGTAAATTTTTTTAAGTTCTTTGTAGATTCTGGATATTAGCCCTTTGTCAGATGGGTAGATTGCAAAAATTTTCTCCCATTCTGTAGGTTGCCTGTTCATTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTCGGCTTTTGTGGCCATTGCTTTTGGTGTTTCAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACATGTAAGTCTTTAATCCATCTTGAATTAATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGTACCATTTATTAAATAAGAAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTTAAAGATCAGATGGTTGTAGATGTGTGGTATTATTTCTGAGGGCTCTGTTCTGTTCCATTGGTCTATATCTCTGTTTTGGTACCAGTACCATGGTGTTTTGGTTATTGTAGCCTTGTAGTATATTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGTCTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAAGTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTATAAATTACCTTGGCAGTATGGCCATTTTCATGATACTGATTCTTCCTATCCATGAGCATGGAATGTTCTTCAATTTTTTTGTGTCCTCTTTTATTTCGTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCCCATCCCTTGTAAGTTGGATTCCTTGTTATTTTATTCTCTTTGAAGCAATTATGAATGGGAGTTCACTCATGAATTGGCTCTCTGTTTGTTTGCTATTGGTGTAGAGGAATACTTGTGATTTTTGCACATTGATTTTGTATCCTGAGACTGCTGAAGTTACTTATCAGCTTAAGGATATTTTGGGCTGAGACAATGGGGTTTTCTAAATATACTATCATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTCATTTGTTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGATTTGTCATAAATAGCTCTTACTATTTTGAGATACATCTCTTCAACACTGAATTTATCGAGAATTTTTAGCATGAGGGGCTGTTGAATTTTGTCAAAGGCCTTTTCTGCATCTACTGAGATAATCATGTGGTTTTTGTCTTTGGTTCTGTTTATATGCTGGATTACGTTTATTGATTGGTGTATGTTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGATGGATTTGGTTTGCCTGTATTTTATTGAGGATTTTTGAATCGATGTTCATCAGGGATATTGGTCTAAAATTTTCTTTTTTTGTTGTGTCTCTGCCAGGCTTTGGTAGCAGGAAGATGCTGGCCTGATAAAATGAGTTAGGGAGGATTTCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTAGCAACTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTTTTTTTTGTGGGTAGGCTATTAATTATTGCCTCGATTTCAGAGCCTTTTATTGGTCTATTCACGGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGGATGTATGTGTCGAGGAATTTATCCATTTCTTCTCGATTTTCTAGTTTATTTGCATAGAAGTGTTTATAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATTAGTGGTGGTATACCCTTTATCATTTTTTATTGCATCTATTTGATTCTTTTCTCTTTCTTCTTTGTTACTCTTGCTGGCGGCCTATCAATTTTGTTGATCTTTTCAAAAAATCAGCTTCTGGATCCATTGACTTTTTGAAGGGTTTTTTTTTTCTCTATCTCCTTCAGTTCTGCTGTGATCTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTCTCTAGTTCCTTTAATTGTGATGTTAGGGTGTCAATTTTAGATCTTTCCTGCTTTCTCTTGTGGGCATTGAGTGCTATAAATTTCCCTCTACATACTGCTTTAAAG	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2855:HG4_PB_pbsv_2567:HG3_10X_allpass_498:HG2_10X_allpass_400:HG3_PB_HySA_3996:HG2_Ill_tnscope_279:HG4_PB_assemblyticsfalcon_14330:HG4_PB_SVrefine2PBcRDovetail_1352:HG4_PB_SVrefine2Falcon1Dovetail_1537:HG4_Ill_SVrefine2DISCOVARDovetail_1923:HG3_PB_pbsv_2550:HG2_PB_pbsv_2558:HG2_PB_assemblyticsfalcon_14555:HG2_PB_assemblyticsPBcR_14153:HG2_PB_SVrefine2PBcRplusDovetail_6063:HG2_PB_SVrefine2PB10Xhap12_1917:HG2_PB_SVrefine2Falcon2Bionano_1075:HG2_PB_SVrefine2Falcon1plusDovetail_6536:HG2_Ill_SVrefine2DISCOVARplusDovetail_7157:HG2_Ill_MetaSV_2717:HG3_PB_assemblyticsfalcon_14558:HG4_Ill_Krunchall_3706:HG4_10X_allpass_459:HG3_Ill_Krunchall_3567:HG2_Ill_Krunchall_3539:HG4_Ill_MetaSV_2803;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_MetaSV_2717:HG2_Ill_SVrefine2DISCOVARplusDovetail_7157:HG2_PB_SVrefine2Falcon1plusDovetail_6536:HG2_PB_SVrefine2Falcon2Bionano_1075:HG2_PB_SVrefine2PB10Xhap12_1917:HG2_PB_SVrefine2PBcRplusDovetail_6063:HG2_PB_assemblyticsPBcR_14153:HG2_PB_assemblyticsfalcon_14555:HG2_PB_pbsv_2558:HG3_PB_pbsv_2550:HG4_Ill_SVrefine2DISCOVARDovetail_1923:HG4_PB_SVrefine2Falcon1Dovetail_1537:HG4_PB_SVrefine2PBcRDovetail_1352:HG4_PB_assemblyticsfalcon_14330;NumExactMatchSVs=14;ClusterMaxShiftDist=0.000863651;ClusterMaxSizeDiff=0.000863651;ClusterMaxEditDist=0.000863651;PBcalls=14;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-9264;DistBack=80137;DistForward=-9264;DistMin=-9264;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:194689502-194698766;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2092.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:62:66:./.:16:15:9:13:1|0:0:19:58:0:0/1:51:13:0/1:446:219:9222:.:.
chr2	195297135	HG3_PB_SVrefine2Falcon1Dovetail_1595	TGAGGTAATGTCTTTTGCAGGGATATAGATGGAGCTGGAGGCTATTATCTTTAACAAACTAACACAGGAAGAAAAAAAACAAATACCACATGTTCTCATTTATAAGTGGGAGCTAAATGATAAGAATTTATGAAAACAAAGAAGGAAACAGCAGACATTGGGGTCTACTTGAGGGTGAAGGGTGGGAGGAGGGGGAGGAGCAGAAAATATAACTATTGGGTGGTGGGCTTAATACCTGGGTGATGAAATAATATGTACAACAAATTCTCGTGACATCTGTTTACTTATGTAAAAAAAAAAACCCTCATATGTACTCCCAAACCTAAAATAAAAGTTAAAACAAAACAAAACAGTCCAGGAGATCTTAATTCGTGGTTGTGTCTTCTGAGGGTTCATAGAAGCAATGACATTCAAATAGCAATCACATACCTAGAGCCAGATCAGGTTTTCTAAATATGATCTCTCTAGGACTTAGGAGTCTTTGAGAAATGCCTGATTTCAGGCTGGGCAGGAAAATTACAAGTAGAACCTAGAAAATGTTGTTGTTTCTGAATGTAAAAACATATTAAATACTAAAAGGAAATGAGACACAATAAGGACATAGAAACCAACATGAAGGAGCTCAATAGCAAATATGGTGCAATTCACCCTCAAATTAAATATGGGTAATAAAGTACTATAACCTCTTGAATTAATTAACCTATTATACCATTTTGAATAAATTATGTTTTGAATATATTTCACATAATATATACATTATATATTCAAATATATTTTTTGTGTGCCTGTGAGTGTGTGCGTGTGTGTTTGTATGTGTGTGGATGTGTAAAGCCCTTTCTTATAGTAGAGGGCCAAATAATAAATATAGAAAAAACCATTTGGCAACTATCAGTATCAAAATTAATGCAAGCAAAACTGATAGTGCATACTAAAAGTAGTGAGTGAAATTTTGAAGATTCAAAAGTATTACATTATCTCAATGTAACTTCTCACGAGACATCGGAAAACCCAGACAGAAGCAATTTTAAAAAGTGATCATGTTGGCTGGGCGCAGTGGCTCAGGTCTGTAATCCCAGCACTTTGGGAGTCCGAGGCGGGCGGATCAGGAGGTCAGGAGATTGAGACCATCCCATTCTGGCCAATACGGTGAAACCTCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGACTTGAACCCGTGAGACAGAGATTGCAGTGAGCCAACATCGCGCCACTGCACTCCAGCCTGGGCGACA	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2857:HG3_PB_SVrefine2PBcRDovetail_1312:HG2_10X_allpass_401:HG3_10X_allpass_500:HG3_PB_assemblyticsfalcon_14565:HG2_Ill_tnscope_280:HG3_PB_pbsv_2559:HG3_PB_SVrefine2Falcon1Dovetail_1595:HG3_Ill_SVrefine2DISCOVARDovetail_1906:HG2_PB_SVrefine2Falcon1plusDovetail_6540:HG2_Ill_SpiralSDKrefine_9248:HG2_10X_SVrefine210Xhap12_1957:HG2_PB_pbsv_2567:HG2_Ill_MetaSV_2719;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1957:HG2_Ill_SpiralSDKrefine_9248:HG2_PB_SVrefine2Falcon1plusDovetail_6540:HG3_Ill_SVrefine2DISCOVARDovetail_1906:HG3_PB_SVrefine2Falcon1Dovetail_1595:HG3_PB_pbsv_2559;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0873394;ClusterMaxSizeDiff=0.0873394;ClusterMaxEditDist=0.0873394;PBcalls=6;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1309;DistBack=185;DistForward=-1307;DistMin=-1307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=2:195297136-195298447;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2093.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:./.:73:22:0|1:46:1:2:19:0|1:62:0:0:34:0/1:43:5:0/1:99:44:.:.:.
chr2	195477627	HG4_Ill_GATKHCSBGrefine_1785	TTGGATGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCTCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCAC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_170:HG4_Ill_Krunchall_3716:HG4_Ill_Spiral_205:HG4_PB_pbsv_2580:HG2_PB_pbsv_2571:HG2_PB_HySA_4899:HG4_Ill_svaba_3250:HG4_Ill_scalpel_2406:HG4_Ill_manta_630:HG4_Ill_MetaSV_2805:HG4_Ill_GATKHC_4268:HG4_Ill_GATKHCSBGrefine_1785:HG4_10X_allpass_460:HG2_PB_assemblyticsfalcon_14566:HG2_PB_assemblyticsPBcR_14165:HG2_PB_SVrefine2PBcRplusDovetail_6069:HG2_PB_SVrefine2PB10Xhap12_1922:HG2_PB_SVrefine2Falcon2Bionano_1082:HG2_PB_SVrefine2Falcon1plusDovetail_6543:HG2_Ill_svaba_3162:HG2_Ill_scalpel_2470:HG2_Ill_manta_729:HG2_Ill_SpiralSDKrefine_9250:HG2_Ill_SVrefine2DISCOVARplusDovetail_7163:HG2_Ill_MetaSV_2720:HG2_Ill_GATKHC_4206:HG2_Ill_GATKHCSBGrefine_1702:HG2_10X_allpass_402:HG2_10X_SVrefine210Xhap12_1958:HG2_Ill_breakscan11_347;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1958:HG2_10X_allpass_402:HG2_Ill_GATKHCSBGrefine_1702:HG2_Ill_GATKHC_4206:HG2_Ill_MetaSV_2720:HG2_Ill_SVrefine2DISCOVARplusDovetail_7163:HG2_Ill_SpiralSDKrefine_9250:HG2_Ill_manta_729:HG2_Ill_scalpel_2470:HG2_Ill_svaba_3162:HG2_PB_SVrefine2Falcon1plusDovetail_6543:HG2_PB_SVrefine2Falcon2Bionano_1082:HG2_PB_SVrefine2PB10Xhap12_1922:HG2_PB_SVrefine2PBcRplusDovetail_6069:HG2_PB_assemblyticsPBcR_14165:HG2_PB_assemblyticsfalcon_14566:HG4_10X_allpass_460:HG4_Ill_GATKHCSBGrefine_1785:HG4_Ill_GATKHC_4268:HG4_Ill_MetaSV_2805:HG4_Ill_manta_630:HG4_Ill_scalpel_2406:HG4_Ill_svaba_3250;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0185185;ClusterMaxSizeDiff=0.0185185;ClusterMaxEditDist=0.0186916;PBcalls=9;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-107;DistBack=302;DistForward=75101;DistMin=302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=2:195477628-195477745;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2094.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:38:0|1:35:2:1:35:1|0:0:26:34:1:0/1:16:18:./.:.:.:.:.:.
chr2	196031309	HG3_PB_pbsv_2566	GGAAAAGTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2723:HG4_PB_assemblyticsfalcon_14346:HG2_PB_assemblyticsfalcon_14572:HG2_PB_assemblyticsPBcR_14171:HG3_PB_assemblyticsfalcon_14574:HG4_Ill_Krunchall_3721:HG3_Ill_Krunchall_3584:HG2_Ill_Krunchall_3558:HG4_PB_HySA_3900:HG3_PB_HySA_4014:HG4_PB_pbsv_2587:HG2_PB_pbsv_2578:HG2_PB_HySA_4906:HG4_PB_SVrefine2PBcRDovetail_1362:HG4_PB_SVrefine2Falcon1Dovetail_1548:HG4_Ill_scalpel_2407:HG4_Ill_manta_631:HG4_Ill_SVrefine2DISCOVARDovetail_1932:HG4_Ill_GATKHCSBGrefine_1792:HG4_10X_allpass_461:HG3_PB_pbsv_2566:HG3_PB_SVrefine2Falcon1Dovetail_1602:HG3_Ill_scalpel_2622:HG3_Ill_manta_583:HG3_Ill_SVrefine2DISCOVARDovetail_1910:HG3_Ill_GATKHCSBGrefine_1729:HG3_10X_allpass_501:HG2_PB_SVrefine2PBcRplusDovetail_6073:HG2_PB_SVrefine2PB10Xhap12_1926:HG2_PB_SVrefine2Falcon2Bionano_1087:HG2_PB_SVrefine2Falcon1plusDovetail_6549:HG2_Ill_scalpel_2471:HG2_Ill_manta_732:HG2_Ill_SVrefine2DISCOVARplusDovetail_7166:HG2_Ill_GATKHCSBGrefine_1712:HG2_10X_allpass_403:HG2_10X_SVrefine210Xhap12_1964:HG2_Ill_breakscan11_348:HG4_Ill_MetaSV_2807:HG3_Ill_MetaSV_2859:HG2_Ill_tnscope_282;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1964:HG2_10X_allpass_403:HG2_Ill_GATKHCSBGrefine_1712:HG2_Ill_SVrefine2DISCOVARplusDovetail_7166:HG2_Ill_manta_732:HG2_Ill_scalpel_2471:HG2_PB_SVrefine2Falcon1plusDovetail_6549:HG2_PB_SVrefine2Falcon2Bionano_1087:HG2_PB_SVrefine2PB10Xhap12_1926:HG2_PB_SVrefine2PBcRplusDovetail_6073:HG3_10X_allpass_501:HG3_Ill_GATKHCSBGrefine_1729:HG3_Ill_SVrefine2DISCOVARDovetail_1910:HG3_Ill_manta_583:HG3_Ill_scalpel_2622:HG3_PB_SVrefine2Falcon1Dovetail_1602:HG3_PB_pbsv_2566:HG4_10X_allpass_461:HG4_Ill_GATKHCSBGrefine_1792:HG4_Ill_SVrefine2DISCOVARDovetail_1932:HG4_Ill_manta_631:HG4_Ill_scalpel_2407:HG4_PB_SVrefine2Falcon1Dovetail_1548:HG4_PB_SVrefine2PBcRDovetail_1362;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0696517;ClusterMaxSizeDiff=0.0696517;ClusterMaxEditDist=0.0696517;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-305;DistBack=13719;DistForward=20099;DistMin=13719;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8397;REFWIDENED=2:196022924-196040948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2095.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:22:0:25:1/1:0:23:0:21:1/1:0:42:./.:1:10:.:.:.
chr2	196051814	HG3_10X_allpass_502	TAAAAAATAGGTTGGCTGCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGCAAGGGGAATATCACACTCGGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACTTATGTAACTAGCCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAACATTAAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_2579:HG4_Ill_Krunchall_3724:HG4_PB_assemblyticsfalcon_14347:HG2_PB_assemblyticsfalcon_14573:HG2_PB_assemblyticsPBcR_14172:HG4_Ill_Krunchall_3723:HG3_PB_assemblyticsfalcon_14575:HG4_PB_pbsv_2588:HG4_Ill_MetaSV_2809:HG4_PB_HySA_3901:HG4_Ill_scalpel_2408:HG4_Ill_GATKHCSBGrefine_1793:HG4_10X_allpass_462:HG3_PB_HySA_4015:HG3_Ill_Spiral_2780:HG3_Ill_MetaSV_2860:HG2_PB_HySA_4907:HG2_Ill_MetaSV_2724:HG4_Ill_manta_632:HG3_Ill_scalpel_2623:HG3_Ill_manta_584:HG3_Ill_Krunchall_3585:HG3_Ill_GATKHCSBGrefine_1730:HG3_10X_allpass_502:HG2_Ill_scalpel_2472:HG2_Ill_manta_733:HG2_Ill_SpiralSDKrefine_9254:HG2_Ill_Krunchall_3559:HG2_Ill_GATKHCSBGrefine_1713:HG2_10X_allpass_404:HG4_Ill_Krunchall_3722:HG3_PB_pbsv_2567:HG4_Ill_Spiral_206:HG2_Ill_tnscope_283:HG4_PB_SVrefine2PBcRDovetail_1363:HG4_PB_SVrefine2Falcon1Dovetail_1549:HG4_Ill_SVrefine2DISCOVARDovetail_1933:HG3_PB_SVrefine2Falcon1Dovetail_1603:HG3_Ill_SVrefine2DISCOVARDovetail_1911:HG2_PB_SVrefine2PBcRplusDovetail_6074:HG2_PB_SVrefine2PB10Xhap12_1927:HG2_PB_SVrefine2Falcon2Bionano_1088:HG2_PB_SVrefine2Falcon1plusDovetail_6550:HG2_Ill_Spiral_171:HG2_Ill_SVrefine2DISCOVARplusDovetail_7167:HG2_10X_SVrefine210Xhap12_1965;NumClusterSVs=46;ExactMatchIDs=HG2_10X_allpass_404:HG2_Ill_GATKHCSBGrefine_1713:HG2_Ill_Krunchall_3559:HG2_Ill_SpiralSDKrefine_9254:HG2_Ill_manta_733:HG2_Ill_scalpel_2472:HG3_10X_allpass_502:HG3_Ill_GATKHCSBGrefine_1730:HG3_Ill_Krunchall_3585:HG3_Ill_manta_584:HG3_Ill_scalpel_2623:HG4_Ill_manta_632;NumExactMatchSVs=12;ClusterMaxShiftDist=0.132827;ClusterMaxSizeDiff=0.132827;ClusterMaxEditDist=0.132827;PBcalls=17;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=15;NumTechs=3;NumTechsExact=2;SVLEN=-270;DistBack=-372;DistForward=18465;DistMin=-372;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:196042064-196055574;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2096.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:54:1/1:3:20:0:29:1/1:0:26:0:28:1/1:0:22:./.:.:.:.:.:.
chr2	196214814	HG4_Ill_GATKHCSBGrefine_1795	TGCCTGTAATCCCAGCTACTCAGAAGGCTGATGCAGGAGAATCACTTATACCCCGAAGGCAAAGGTTGCAGAGAGCGAAGATTGCACCACCGTGCTCCAGCCTGGGTGACAGAGCACCCAGGACACTGTGATTAATTGAATAATGAGAACCCTATATGTCTCATTAATAATGAGAACCCTATATCTAGTCTCCCATAGACTAGAAGGAAATATTTAACACTGAAAGGTGACTGGGAAGCTATAGGATTTGTCCAAGATACCATCTCAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAGAAAAAGGCACACCTTTGTTGTGGAAAACAGCTTTATCTCTCTCCCACCCACCATTGACTTCTCTCCCTATCCCCACTCCATAAAGGCATAGAGCGCAGGTCATTTAAGTCTGGA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_349:HG4_10X_allpass_463:HG4_PB_HySA_3904:HG3_PB_HySA_4017:HG2_PB_HySA_4910:HG4_PB_assemblyticsfalcon_14350:HG3_PB_assemblyticsfalcon_14578:HG2_PB_assemblyticsfalcon_14575:HG2_PB_assemblyticsPBcR_14175:HG4_Ill_Krunchall_3727:HG4_Ill_MetaSV_2811:HG3_Ill_MetaSV_2861:HG2_Ill_tnscope_284:HG2_Ill_MetaSV_2725:HG4_PB_pbsv_2590:HG4_PB_SVrefine2PBcRDovetail_1364:HG4_PB_SVrefine2Falcon1Dovetail_1551:HG4_Ill_manta_633:HG4_Ill_SVrefine2DISCOVARDovetail_1934:HG4_Ill_GATKHCSBGrefine_1795:HG3_PB_pbsv_2568:HG3_PB_SVrefine2Falcon1Dovetail_1604:HG3_Ill_manta_585:HG3_Ill_SVrefine2DISCOVARDovetail_1912:HG3_Ill_GATKHCSBGrefine_1731:HG3_10X_allpass_503:HG2_PB_pbsv_2581:HG2_PB_SVrefine2PBcRplusDovetail_6076:HG2_PB_SVrefine2PB10Xhap12_1928:HG2_PB_SVrefine2Falcon2Bionano_1090:HG2_PB_SVrefine2Falcon1plusDovetail_6552:HG2_Ill_manta_734:HG2_Ill_SpiralSDKrefine_9256:HG2_Ill_SVrefine2DISCOVARplusDovetail_7168:HG2_Ill_GATKHCSBGrefine_1714:HG2_10X_allpass_405:HG2_10X_SVrefine210Xhap12_1966;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1966:HG2_10X_allpass_405:HG2_Ill_GATKHCSBGrefine_1714:HG2_Ill_SVrefine2DISCOVARplusDovetail_7168:HG2_Ill_SpiralSDKrefine_9256:HG2_Ill_manta_734:HG2_PB_SVrefine2Falcon1plusDovetail_6552:HG2_PB_SVrefine2Falcon2Bionano_1090:HG2_PB_SVrefine2PB10Xhap12_1928:HG2_PB_SVrefine2PBcRplusDovetail_6076:HG2_PB_pbsv_2581:HG3_10X_allpass_503:HG3_Ill_GATKHCSBGrefine_1731:HG3_Ill_SVrefine2DISCOVARDovetail_1912:HG3_Ill_manta_585:HG3_PB_SVrefine2Falcon1Dovetail_1604:HG3_PB_pbsv_2568:HG4_Ill_GATKHCSBGrefine_1795:HG4_Ill_SVrefine2DISCOVARDovetail_1934:HG4_Ill_manta_633:HG4_PB_SVrefine2Falcon1Dovetail_1551:HG4_PB_SVrefine2PBcRDovetail_1364:HG4_PB_pbsv_2590;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0195122;ClusterMaxSizeDiff=0.0195122;ClusterMaxEditDist=0.0195122;PBcalls=17;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-412;DistBack=-413;DistForward=1207;DistMin=-413;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:196214815-196215228;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2097.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:68:1/1:1:26:1:15:1/1:0:15:0:17:1/1:0:53:1/1:2:21:.:.:.
chr2	196736411	HG3_PB_SVrefine2Falcon1Dovetail_1605	TAAACTACTTAAGGGAAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTTAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_172:HG3_PB_assemblyticsfalcon_14582:HG2_PB_assemblyticsPBcR_14181:HG4_PB_pbsv_2591:HG2_PB_assemblyticsfalcon_14580:HG2_PB_PB10Xdip_16796:HG2_PB_SVrefine2PB10Xhap12_1930:HG4_Ill_MetaSV_2812:HG2_Ill_tnscope_285:HG2_Ill_MetaSV_2726:HG4_PB_SVrefine2PBcRDovetail_1365:HG4_PB_SVrefine2Falcon1Dovetail_1552:HG4_Ill_scalpel_2415:HG4_Ill_manta_634:HG4_Ill_SVrefine2DISCOVARDovetail_1935:HG4_Ill_GATKHCSBGrefine_1797:HG3_PB_SVrefine2Falcon1Dovetail_1605:HG2_PB_pbsv_2583:HG2_PB_SVrefine2PBcRplusDovetail_6077:HG2_PB_SVrefine2PB10Xhap12_1929:HG2_PB_SVrefine2Falcon1plusDovetail_6553:HG2_PB_HySA_4914:HG2_Ill_manta_735:HG2_Ill_SVrefine2DISCOVARplusDovetail_7169:HG2_Ill_GATKHCSBGrefine_1716:HG2_10X_SVrefine210Xhap12_1968:HG4_Ill_Spiral_207;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1968:HG2_Ill_GATKHCSBGrefine_1716:HG2_Ill_SVrefine2DISCOVARplusDovetail_7169:HG2_Ill_manta_735:HG2_PB_HySA_4914:HG2_PB_SVrefine2Falcon1plusDovetail_6553:HG2_PB_SVrefine2PB10Xhap12_1929:HG2_PB_SVrefine2PBcRplusDovetail_6077:HG2_PB_pbsv_2583:HG3_PB_SVrefine2Falcon1Dovetail_1605:HG4_Ill_GATKHCSBGrefine_1797:HG4_Ill_SVrefine2DISCOVARDovetail_1935:HG4_Ill_manta_634:HG4_Ill_scalpel_2415:HG4_PB_SVrefine2Falcon1Dovetail_1552:HG4_PB_SVrefine2PBcRDovetail_1365;NumExactMatchSVs=16;ClusterMaxShiftDist=0.113761;ClusterMaxSizeDiff=0.113761;ClusterMaxEditDist=0.113761;PBcalls=14;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-279;DistBack=24730;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:196736412-196736706;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2098.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:53:0|1:31:0:1:48:1|0:0:18:34:0:0/1:9:20:./.:.:.:.:.:.
chr2	197614616	HG2_PB_SVrefine2PB10Xhap12_1933	TAAAAGTATTAAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1972:HG3_10X_allpass_504:HG4_10X_allpass_464:HG2_Ill_Krunchall_3567:HG2_PB_assemblyticsPBcR_14187:HG4_PB_pbsv_2593:HG2_PB_pbsv_2586:HG2_PB_SVrefine2PB10Xhap12_1934:HG4_Ill_MetaSV_2813:HG3_Ill_MetaSV_2862:HG2_PB_HySA_4924:HG2_Ill_MetaSV_2727:HG4_PB_SVrefine2Falcon1Dovetail_1555:HG4_Ill_scalpel_2420:HG4_Ill_manta_635:HG4_Ill_GATKHCSBGrefine_1799:HG3_PB_pbsv_2571:HG3_Ill_scalpel_2634:HG3_Ill_manta_586:HG3_Ill_GATKHCSBGrefine_1734:HG2_PB_SVrefine2PBcRplusDovetail_6080:HG2_PB_SVrefine2PB10Xhap12_1933:HG2_Ill_scalpel_2485:HG2_Ill_manta_736:HG2_Ill_breakscan11_350:HG2_Ill_SpiralSDKrefine_9264:HG2_Ill_GATKHCSBGrefine_1718:HG2_10X_allpass_406;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1972:HG4_PB_SVrefine2Falcon1Dovetail_1555:HG4_Ill_scalpel_2420:HG4_Ill_manta_635:HG4_Ill_GATKHCSBGrefine_1799:HG3_PB_pbsv_2571:HG3_Ill_scalpel_2634:HG3_Ill_manta_586:HG3_Ill_GATKHCSBGrefine_1734:HG2_PB_SVrefine2PBcRplusDovetail_6080:HG2_PB_SVrefine2PB10Xhap12_1933:HG2_Ill_scalpel_2485:HG2_Ill_manta_736:HG2_Ill_breakscan11_350:HG2_Ill_SpiralSDKrefine_9264:HG2_Ill_GATKHCSBGrefine_1718:HG2_10X_allpass_406;NumExactMatchSVs=17;ClusterMaxShiftDist=0.109756;ClusterMaxSizeDiff=0.109756;ClusterMaxEditDist=0.112805;PBcalls=9;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=2132;DistForward=-288;DistMin=-288;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6287;REFWIDENED=2:197605486-197621235;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:46:0|1:39:7:1:28:1|0:0:15:44:0:0/1:31:13:0/1:25:8:.:.:.
chr2	198894512	HG2_Ill_SVrefine2DISCOVARplusDovetail_7176	TCTCCTGGATTCAAGTGATTCTCCTGCTTCAGTTTCCTGAGTAGCTGGGATTACAGGCATGCATCACCATGCCCAGCTAATTTTGTATTTTCAGTAGAGACGGGGTTTCACCATGTTGCCTAGGCTGATCTTGAATGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1975:HG3_PB_HySA_4036:HG2_PB_HySA_4936:HG2_PB_SVrefine2PB10Xhap12_1938:HG2_PB_PB10Xdip_16807:HG3_PB_pbsv_2575:HG3_PB_assemblyticsfalcon_14598:HG3_PB_SVrefine2Falcon1Dovetail_1609:HG3_Ill_svaba_3299:HG3_Ill_scalpel_2641:HG3_Ill_MetaSV_2863:HG3_Ill_GATKHCSBGrefine_1737:HG3_CG_vcfBeta_1469:HG3_10X_allpass_506:HG2_PB_pbsv_2589:HG2_PB_assemblyticsfalcon_14598:HG2_PB_assemblyticsPBcR_14194:HG2_PB_SVrefine2PBcRplusDovetail_6081:HG2_PB_SVrefine2PB10Xhap12_1937:HG2_PB_SVrefine2Falcon1plusDovetail_6559:HG2_PB_PB10Xdip_16808:HG2_Ill_svaba_3184:HG2_Ill_manta_738:HG2_Ill_SpiralSDKrefine_9274:HG2_Ill_SVrefine2DISCOVARplusDovetail_7176:HG2_Ill_MetaSV_2729:HG2_Ill_GATKHCSBGrefine_1720:HG2_CG_vcfBeta_1565;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1975:HG3_PB_pbsv_2575:HG3_PB_assemblyticsfalcon_14598:HG3_PB_SVrefine2Falcon1Dovetail_1609:HG3_Ill_svaba_3299:HG3_Ill_scalpel_2641:HG3_Ill_MetaSV_2863:HG3_Ill_GATKHCSBGrefine_1737:HG3_CG_vcfBeta_1469:HG3_10X_allpass_506:HG2_PB_pbsv_2589:HG2_PB_assemblyticsfalcon_14598:HG2_PB_assemblyticsPBcR_14194:HG2_PB_SVrefine2PBcRplusDovetail_6081:HG2_PB_SVrefine2PB10Xhap12_1937:HG2_PB_SVrefine2Falcon1plusDovetail_6559:HG2_PB_PB10Xdip_16808:HG2_Ill_svaba_3184:HG2_Ill_manta_738:HG2_Ill_SpiralSDKrefine_9274:HG2_Ill_SVrefine2DISCOVARplusDovetail_7176:HG2_Ill_MetaSV_2729:HG2_Ill_GATKHCSBGrefine_1720:HG2_CG_vcfBeta_1565;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0872727;ClusterMaxSizeDiff=0.0872727;ClusterMaxEditDist=0.0872727;PBcalls=14;Illcalls=10;TenXcalls=2;CGcalls=2;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=2;HG2count=18;HG3count=10;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-137;DistBack=-50;DistForward=8918;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:198894513-198894651;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:31:0|1:36:2:0:25:0|1:40:0:0:17:0/1:34:19:./.:.:.:.:.:.
chr2	200312455	HG3_Ill_scalpel_2650	GAATGAGAGCCAAATGGTCTCTCCCTAAAACAGATTTTAGCTAATAAACACAACAAAGTATGCGAAAAGCACTTCAGTTTTTCTGCATCTTCTCCAAGACTAAAAATTTGTACATTGTGTGACAGGTCCACCTCATTTTTCTTAATGATGTTTTTATTATTCTTTCACTCAATTAAAGCAGAAATGGATATTGCATCTTCTGACTGTATAATTGTTATTGTAATC	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_3590:HG4_Ill_MetaSV_2816:HG2_PB_HySA_4950:HG2_Ill_MetaSV_2731:HG4_PB_pbsv_2599:HG4_PB_assemblyticsfalcon_14374:HG4_PB_SVrefine2PBcRDovetail_1370:HG4_PB_SVrefine2Falcon1Dovetail_1558:HG4_Ill_svaba_3284:HG4_Ill_manta_637:HG4_Ill_SVrefine2DISCOVARDovetail_1946:HG4_Ill_GATKHCSBGrefine_1802:HG4_Ill_Cortex_1969:HG4_10X_allpass_467:HG3_PB_SVrefine2Falcon1Dovetail_1610:HG3_Ill_svaba_3310:HG3_Ill_scalpel_2650:HG3_Ill_manta_588:HG3_Ill_SVrefine2DISCOVARDovetail_1926:HG3_Ill_MetaSV_2864:HG3_Ill_GATKHCSBGrefine_1741:HG3_Ill_Cortex_2013:HG3_10X_allpass_507:HG2_PB_pbsv_2592:HG2_PB_assemblyticsfalcon_14610:HG2_PB_assemblyticsPBcR_14206:HG2_PB_SVrefine2PBcRplusDovetail_6082:HG2_PB_SVrefine2Falcon2Bionano_1095:HG2_PB_SVrefine2Falcon1plusDovetail_6560:HG2_Ill_svaba_3192:HG2_Ill_scalpel_2502:HG2_Ill_manta_740:HG2_Ill_SpiralSDKrefine_9280:HG2_Ill_SVrefine2DISCOVARplusDovetail_7179:HG2_Ill_GATKHCSBGrefine_1723:HG2_Ill_Cortex_4661:HG2_10X_allpass_407:HG2_10X_SVrefine210Xhap12_1980:HG2_Ill_breakscan11_351:HG4_PB_HySA_3932:HG3_PB_assemblyticsfalcon_14610:HG3_PB_pbsv_2579:HG3_Ill_Krunchall_3618;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1980:HG2_10X_allpass_407:HG2_Ill_Cortex_4661:HG2_Ill_GATKHCSBGrefine_1723:HG2_Ill_SVrefine2DISCOVARplusDovetail_7179:HG2_Ill_SpiralSDKrefine_9280:HG2_Ill_manta_740:HG2_Ill_scalpel_2502:HG2_Ill_svaba_3192:HG2_PB_SVrefine2Falcon1plusDovetail_6560:HG2_PB_SVrefine2Falcon2Bionano_1095:HG2_PB_SVrefine2PBcRplusDovetail_6082:HG2_PB_assemblyticsPBcR_14206:HG2_PB_assemblyticsfalcon_14610:HG2_PB_pbsv_2592:HG3_10X_allpass_507:HG3_Ill_Cortex_2013:HG3_Ill_GATKHCSBGrefine_1741:HG3_Ill_MetaSV_2864:HG3_Ill_SVrefine2DISCOVARDovetail_1926:HG3_Ill_manta_588:HG3_Ill_scalpel_2650:HG3_Ill_svaba_3310:HG3_PB_SVrefine2Falcon1Dovetail_1610:HG4_10X_allpass_467:HG4_Ill_Cortex_1969:HG4_Ill_GATKHCSBGrefine_1802:HG4_Ill_SVrefine2DISCOVARDovetail_1946:HG4_Ill_manta_637:HG4_Ill_svaba_3284:HG4_PB_SVrefine2Falcon1Dovetail_1558:HG4_PB_SVrefine2PBcRDovetail_1370:HG4_PB_assemblyticsfalcon_14374:HG4_PB_pbsv_2599;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0133038;ClusterMaxSizeDiff=0.0133038;ClusterMaxEditDist=0.0133333;PBcalls=15;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=19;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-224;DistBack=-1;DistForward=124363;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:200312456-200312679;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2102.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:0:21:0:5:1/1:0:8:0:15:1/1:0:40:./.:.:.:.:.:.
chr2	200489618	HG2_Ill_manta_741	TGGCCTCAAACTCCTGGCCTCAAACAATCCTCCCACTTGGCCTCCCAAAATGCTGGGATTATAGGTGTGAGCCACTGCACCCAGCCAAATTGTGAAGTTTTTTTACCATGAGCACACACACACACATACACACACACACATACGTTTATTTATTTACTTCTTTGGTAACAAGACTCCAGTTTCCTTTTTAGGAAATCACCTGACCCCATAAAGAACAGTCTTGAGAGGTCTGCCATTAAGATGTCCCTGTTCCCCCAGCCAGTGAATGAGTGCCTGAGCCAAGGTACACCAGACAGACTGCATTCCTGAGACTGAGTCTTGAGCACAGCATAGCAAGGACAGGTGGGTGCTTACTCTGTCTAGAGGCAGTGACTTGCCAATACTATTACTTTCTACTACCCAGAATCTGACTGCCCTGAGTCCTGAACTTTTCCCAATATGATTATTTGGTC	AACA	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6561:HG3_Ill_GATKHCSBGrefine_1743:HG2_Ill_GATKHCSBGrefine_1725:HG2_Ill_SpiralSDKrefine_9281:HG3_10X_allpass_508:HG2_10X_allpass_408:HG2_Ill_tnscope_286:HG3_PB_SVrefine2Falcon1Dovetail_1611:HG3_Ill_manta_589:HG3_Ill_SVrefine2DISCOVARDovetail_1928:HG2_PB_SVrefine2PBcRplusDovetail_6083:HG2_PB_SVrefine2Falcon2Bionano_1096:HG2_Ill_manta_741:HG2_10X_SVrefine210Xhap12_1981:HG3_Ill_MetaSV_2865:HG2_Ill_MetaSV_2732:HG3_Ill_Spiral_2807:HG2_Ill_Spiral_173:HG3_PB_pbsv_2580:HG2_PB_pbsv_2593:HG2_PB_assemblyticsPBcR_14207:HG3_PB_assemblyticsfalcon_14611:HG3_Ill_Krunchall_3619:HG2_PB_assemblyticsfalcon_14611;NumClusterSVs=24;ExactMatchIDs=HG2_PB_assemblyticsPBcR_14207:HG2_10X_SVrefine210Xhap12_1981:HG2_Ill_manta_741:HG2_PB_SVrefine2Falcon2Bionano_1096:HG2_PB_SVrefine2PBcRplusDovetail_6083:HG3_Ill_SVrefine2DISCOVARDovetail_1928:HG3_Ill_manta_589:HG3_PB_SVrefine2Falcon1Dovetail_1611;NumExactMatchSVs=8;ClusterMaxShiftDist=0.061294;ClusterMaxSizeDiff=0.061294;ClusterMaxEditDist=0.061294;PBcalls=9;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-448;DistBack=-213;DistForward=-236;DistMin=-236;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:200489618-200490069;PctSeqSimilarity=0.972;PctSizeSimilarity=0.9933;PctRecOverlap=0.9978;SizeDiff=-3;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=98;MatchId=2103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:43:33:0|1:29:4:1:22:0|1:60:0:0:33:0/1:74:17:0/1:53:9:.:.:.
chr2	200530386	HG2_Ill_svaba_3195	AAGAAAGAAGAGAACGGCCGGGCGCGGTGGCTCAAGCCTGTAATCCCACCACTTTGGGAGGCCGAGGCGGGTGGATCGCGAGGTCAGGAGATCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_1982:HG4_PB_HySA_3933:HG3_PB_HySA_4045:HG2_PB_HySA_4951:HG3_PB_pbsv_2581:HG4_PB_SVrefine2Falcon1Dovetail_1559:HG4_PB_pbsv_2600:HG2_Ill_SpiralSDKrefine_9282:HG3_PB_assemblyticsfalcon_14612:HG4_PB_assemblyticsfalcon_14376:HG4_PB_SVrefine2PBcRDovetail_1371:HG4_Ill_svaba_3285:HG4_Ill_scalpel_2438:HG4_Ill_SVrefine2DISCOVARDovetail_1947:HG4_Ill_GATKHC_4311:HG4_Ill_GATKHCSBGrefine_1803:HG4_10X_allpass_468:HG3_PB_SVrefine2Falcon1Dovetail_1612:HG3_Ill_svaba_3313:HG3_Ill_scalpel_2651:HG3_Ill_manta_590:HG3_Ill_SVrefine2DISCOVARDovetail_1930:HG3_Ill_GATKHC_4390:HG3_Ill_GATKHCSBGrefine_1744:HG3_CG_vcfBeta_1472:HG3_10X_allpass_509:HG2_PB_pbsv_2594:HG2_PB_assemblyticsfalcon_14612:HG2_PB_assemblyticsPBcR_14208:HG2_PB_SVrefine2PBcRplusDovetail_6084:HG2_PB_SVrefine2Falcon2Bionano_1097:HG2_PB_SVrefine2Falcon1plusDovetail_6562:HG2_Ill_svaba_3195:HG2_Ill_manta_742:HG2_Ill_SVrefine2DISCOVARplusDovetail_7180:HG2_Ill_GATKHC_4251:HG2_Ill_GATKHCSBGrefine_1726;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1982:HG4_PB_assemblyticsfalcon_14376:HG4_PB_SVrefine2PBcRDovetail_1371:HG4_Ill_svaba_3285:HG4_Ill_scalpel_2438:HG4_Ill_SVrefine2DISCOVARDovetail_1947:HG4_Ill_GATKHC_4311:HG4_Ill_GATKHCSBGrefine_1803:HG4_10X_allpass_468:HG3_PB_SVrefine2Falcon1Dovetail_1612:HG3_Ill_svaba_3313:HG3_Ill_scalpel_2651:HG3_Ill_manta_590:HG3_Ill_SVrefine2DISCOVARDovetail_1930:HG3_Ill_GATKHC_4390:HG3_Ill_GATKHCSBGrefine_1744:HG3_CG_vcfBeta_1472:HG3_10X_allpass_509:HG2_PB_pbsv_2594:HG2_PB_assemblyticsfalcon_14612:HG2_PB_assemblyticsPBcR_14208:HG2_PB_SVrefine2PBcRplusDovetail_6084:HG2_PB_SVrefine2Falcon2Bionano_1097:HG2_PB_SVrefine2Falcon1plusDovetail_6562:HG2_Ill_svaba_3195:HG2_Ill_manta_742:HG2_Ill_SVrefine2DISCOVARplusDovetail_7180:HG2_Ill_GATKHC_4251:HG2_Ill_GATKHCSBGrefine_1726;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0430108;ClusterMaxSizeDiff=0.0430108;ClusterMaxEditDist=0.0432432;PBcalls=16;Illcalls=17;TenXcalls=3;CGcalls=1;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=1;HG2count=14;HG3count=12;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-93;DistBack=27703;DistForward=35542;DistMin=27703;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=2:200530387-200530493;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2104.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:1:30:4:27:1/1:0:12:0:6:1/1:0:17:./.:.:.:.:.:.
chr2	201691350	HG2_PB_assemblyticsPBcR_14217	ACCTTGAATCAGAACCTCAGTTGTTAAAGGCTTAACTGCTTGTGGCAACTACTATAGTGCTCTAGTGGGGACAGTGGTTAAAATCTGCAGAATC	a	20	PASS	ClusterIDs=HG3_PB_pbsv_2584:HG3_PB_HySA_4056:HG4_PB_pbsv_2603:HG2_PB_HySA_4960:HG4_PB_assemblyticsfalcon_14384:HG2_PB_assemblyticsPBcR_14217:HG3_PB_assemblyticsfalcon_14621:HG4_PB_SVrefine2Falcon1Dovetail_1561:HG4_Ill_svaba_3293:HG4_Ill_Krunchall_3766:HG4_Ill_GATKHC_4320:HG4_Ill_GATKHCSBGrefine_1806:HG4_Ill_Cortex_1973:HG4_Ill_250bpfermikitraw_3560:HG4_Ill_150bpfermikitraw_3438:HG4_CG_vcfBeta_1731:HG4_10X_allpass_469:HG3_PB_SVrefine2Falcon1Dovetail_1614:HG3_Ill_svaba_3323:HG3_Ill_manta_592:HG3_Ill_Krunchall_3628:HG3_Ill_GATKHC_4405:HG3_Ill_GATKHCSBGrefine_1748:HG3_Ill_Cortex_2017:HG3_Ill_250bpfermikitraw_3510:HG3_Ill_150bpfermikitraw_3391:HG3_CG_vcfBeta_1477:HG2_PB_pbsv_2597:HG2_PB_assemblyticsfalcon_14622:HG2_PB_SVrefine2PBcRplusDovetail_6086:HG2_PB_SVrefine2PB10Xhap12_1941:HG2_PB_SVrefine2Falcon1plusDovetail_6564:HG2_Ill_svaba_3203:HG2_Ill_manta_744:HG2_Ill_SpiralSDKrefine_9291:HG2_Ill_Krunchall_3598:HG2_Ill_GATKHC_4263:HG2_Ill_GATKHCSBGrefine_1730:HG2_Ill_Cortex_4666:HG2_Ill_250bpfermikitraw_3547:HG2_CG_vcfBeta_1569:HG2_10X_SVrefine210Xhap12_1986;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1986:HG2_CG_vcfBeta_1569:HG2_Ill_250bpfermikitraw_3547:HG2_Ill_Cortex_4666:HG2_Ill_GATKHCSBGrefine_1730:HG2_Ill_GATKHC_4263:HG2_Ill_Krunchall_3598:HG2_Ill_SpiralSDKrefine_9291:HG2_Ill_manta_744:HG2_Ill_svaba_3203:HG2_PB_SVrefine2Falcon1plusDovetail_6564:HG2_PB_SVrefine2PB10Xhap12_1941:HG2_PB_SVrefine2PBcRplusDovetail_6086:HG2_PB_assemblyticsPBcR_14217:HG4_PB_SVrefine2Falcon1Dovetail_1561:HG4_Ill_svaba_3293:HG4_Ill_Krunchall_3766:HG4_Ill_GATKHC_4320:HG4_Ill_GATKHCSBGrefine_1806:HG4_Ill_Cortex_1973:HG4_Ill_250bpfermikitraw_3560:HG4_Ill_150bpfermikitraw_3438:HG4_CG_vcfBeta_1731:HG4_10X_allpass_469:HG3_PB_SVrefine2Falcon1Dovetail_1614:HG3_Ill_svaba_3323:HG3_Ill_manta_592:HG3_Ill_Krunchall_3628:HG3_Ill_GATKHC_4405:HG3_Ill_GATKHCSBGrefine_1748:HG3_Ill_Cortex_2017:HG3_Ill_250bpfermikitraw_3510:HG3_Ill_150bpfermikitraw_3391:HG3_CG_vcfBeta_1477:HG2_PB_pbsv_2597:HG2_PB_assemblyticsfalcon_14622;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0972973;ClusterMaxSizeDiff=0.0972973;ClusterMaxEditDist=0.0978261;PBcalls=14;Illcalls=23;TenXcalls=2;CGcalls=3;PBexactcalls=8;Illexactcalls=23;TenXexactcalls=2;CGexactcalls=3;HG2count=17;HG3count=13;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-93;DistBack=-94;DistForward=14490;DistMin=-94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=2:201691351-201691448;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2105.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:37:0|1:25:4:2:32:./.:45:0:1:19:0/1:25:13:./.:.:.:.:.:.
chr2	202146648	HG3_PB_SVrefine2Falcon1Dovetail_1615	TTCAAATTCTTTTTTTTTTTTTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCACAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCCGGCAGAAGCGCCCCTCACCTCCCAGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCGCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGTTCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCCGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCAGCCGGCCGGAAGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGGGCGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGTTGAACCCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGTTGACCCCCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGATGGCCGACCACCCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGTTGCCAGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGAGCGGCCGGGCAGAGACACTCCTCACCTCCCAGACAGGGTTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGTGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTTCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCACACTGGGCAGCCAGGCAGAGGGGCTCCTCATATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGCGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGTAGCAAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAAACCCCATCTCCACCAAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATGAGAGGGAGAGGGAGACGGGGAGAGGGAGAGGGAGAGGGAGACGGGGAGAGGGAGAGGGAGAGGGG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2734:HG4_10X_allpass_470:HG4_PB_assemblyticsfalcon_14386:HG2_PB_assemblyticsfalcon_14624:HG2_PB_assemblyticsPBcR_14219:HG3_PB_assemblyticsfalcon_14622:HG2_10X_allpass_409:HG3_10X_allpass_510:HG4_Ill_Krunchall_3769:HG3_Ill_Krunchall_3630:HG2_Ill_Krunchall_3601:HG4_PB_pbsv_2604:HG4_PB_SVrefine2PBcRDovetail_1374:HG4_PB_SVrefine2Falcon1Dovetail_1562:HG4_Ill_SVrefine2DISCOVARDovetail_1951:HG4_Ill_MetaSV_2818:HG4_Ill_GATKHCSBGrefine_1807:HG3_PB_pbsv_2585:HG3_PB_SVrefine2Falcon1Dovetail_1615:HG3_Ill_GATKHCSBGrefine_1749:HG2_PB_pbsv_2598:HG2_PB_SVrefine2PBcRplusDovetail_6087:HG2_PB_SVrefine2Falcon2Bionano_1099:HG2_PB_SVrefine2Falcon1plusDovetail_6565:HG2_Ill_GATKHCSBGrefine_1731:HG2_10X_SVrefine210Xhap12_1987:HG2_Ill_breakscan11_353:HG2_Ill_tnscope_287:HG3_Ill_MetaSV_2867;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1987:HG2_Ill_GATKHCSBGrefine_1731:HG2_PB_SVrefine2Falcon1plusDovetail_6565:HG2_PB_SVrefine2Falcon2Bionano_1099:HG2_PB_SVrefine2PBcRplusDovetail_6087:HG2_PB_pbsv_2598:HG3_Ill_GATKHCSBGrefine_1749:HG3_PB_SVrefine2Falcon1Dovetail_1615:HG3_PB_pbsv_2585:HG4_Ill_GATKHCSBGrefine_1807:HG4_Ill_MetaSV_2818:HG4_Ill_SVrefine2DISCOVARDovetail_1951:HG4_PB_SVrefine2Falcon1Dovetail_1562:HG4_PB_SVrefine2PBcRDovetail_1374:HG4_PB_pbsv_2604;NumExactMatchSVs=15;ClusterMaxShiftDist=0.053931;ClusterMaxSizeDiff=0.053931;ClusterMaxEditDist=0.053931;PBcalls=13;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2792;DistBack=44486;DistForward=-2783;DistMin=-2783;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=2:202146649-202149450;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2106.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:16:130:1/1:1:34:0:24:./.:5:19:0:17:0/1:9:57:1/1:3:210:2751:.:.
chr2	206731182	HG2_Ill_scalpel_2543	CAAAAGAGACATTTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_355:HG2_10X_allpass_410:HG4_PB_assemblyticsfalcon_14425:HG3_PB_assemblyticsfalcon_14658:HG2_PB_assemblyticsPBcR_14260:HG3_Ill_Krunchall_3678:HG2_Ill_Krunchall_3644:HG2_PB_assemblyticsfalcon_14662:HG2_PB_pbsv_2615:HG4_Ill_MetaSV_2824:HG3_PB_HySA_4089:HG3_Ill_MetaSV_2875:HG2_PB_HySA_5017:HG2_Ill_tnscope_289:HG2_Ill_MetaSV_2740:HG4_PB_pbsv_2618:HG4_PB_SVrefine2PBcRDovetail_1385:HG4_PB_SVrefine2Falcon1Dovetail_1576:HG4_Ill_svaba_3332:HG4_Ill_scalpel_2476:HG4_Ill_manta_643:HG4_Ill_SVrefine2DISCOVARDovetail_1976:HG4_Ill_GATKHCSBGrefine_1819:HG4_10X_allpass_473:HG3_PB_pbsv_2602:HG3_PB_SVrefine2Falcon1Dovetail_1629:HG3_Ill_svaba_3362:HG3_Ill_scalpel_2688:HG3_Ill_manta_599:HG3_Ill_SVrefine2DISCOVARDovetail_1962:HG3_Ill_GATKHCSBGrefine_1764:HG3_10X_allpass_514:HG2_PB_SVrefine2PBcRplusDovetail_6102:HG2_PB_SVrefine2PB10Xhap12_1956:HG2_PB_SVrefine2Falcon2Bionano_1110:HG2_PB_SVrefine2Falcon1plusDovetail_6580:HG2_Ill_svaba_3241:HG2_Ill_scalpel_2543:HG2_Ill_SVrefine2DISCOVARplusDovetail_7206:HG2_Ill_GATKHCSBGrefine_1743:HG2_10X_SVrefine210Xhap12_2005;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2005:HG2_Ill_GATKHCSBGrefine_1743:HG2_Ill_SVrefine2DISCOVARplusDovetail_7206:HG2_Ill_scalpel_2543:HG2_Ill_svaba_3241:HG2_PB_SVrefine2Falcon1plusDovetail_6580:HG2_PB_SVrefine2Falcon2Bionano_1110:HG2_PB_SVrefine2PB10Xhap12_1956:HG2_PB_SVrefine2PBcRplusDovetail_6102:HG3_10X_allpass_514:HG3_Ill_GATKHCSBGrefine_1764:HG3_Ill_SVrefine2DISCOVARDovetail_1962:HG3_Ill_manta_599:HG3_Ill_scalpel_2688:HG3_Ill_svaba_3362:HG3_PB_SVrefine2Falcon1Dovetail_1629:HG3_PB_pbsv_2602:HG4_10X_allpass_473:HG4_Ill_GATKHCSBGrefine_1819:HG4_Ill_SVrefine2DISCOVARDovetail_1976:HG4_Ill_manta_643:HG4_Ill_scalpel_2476:HG4_Ill_svaba_3332:HG4_PB_SVrefine2Falcon1Dovetail_1576:HG4_PB_SVrefine2PBcRDovetail_1385:HG4_PB_pbsv_2618;NumExactMatchSVs=26;ClusterMaxShiftDist=0.10443;ClusterMaxSizeDiff=0.10443;ClusterMaxEditDist=0.10443;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=47634;DistForward=7759;DistMin=7759;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=2:206731183-206731522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:0:32:0:15:1/1:0:28:0:22:1/1:0:53:0/1:2:12:.:.:.
chr2	206845198	HG4_Ill_MetaSV_2825	ATGTCACCACACCTACTAATTTTTGTACTTTTTGTAGAGATGAGGTTTCGCCATGTTGCCCTGGCTGGCCTCAAACTCAGGCTCAAGCAATCCTCCTGCCTCAGCCTCCCAAAGTGC	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7207:HG4_PB_pbsv_2619:HG4_Ill_svaba_3335:HG4_Ill_scalpel_2479:HG4_Ill_manta_644:HG4_Ill_MetaSV_2825:HG4_Ill_GATKHC_4373:HG4_Ill_GATKHCSBGrefine_1820:HG4_10X_allpass_474:HG2_PB_pbsv_2616:HG2_Ill_svaba_3244:HG2_Ill_scalpel_2546:HG2_Ill_breakscan11_356:HG2_Ill_MetaSV_2741:HG2_Ill_GATKHC_4317:HG2_Ill_GATKHCSBGrefine_1744:HG2_10X_allpass_411:HG2_PB_SVrefine2PB10Xhap12_1957:HG2_PB_SVrefine2Falcon2Bionano_1111;NumClusterSVs=19;ExactMatchIDs=HG2_10X_allpass_411:HG2_Ill_GATKHCSBGrefine_1744:HG2_Ill_GATKHC_4317:HG2_Ill_MetaSV_2741:HG2_Ill_breakscan11_356:HG2_Ill_scalpel_2546:HG2_Ill_svaba_3244:HG2_PB_pbsv_2616:HG4_10X_allpass_474:HG4_Ill_GATKHCSBGrefine_1820:HG4_Ill_GATKHC_4373:HG4_Ill_MetaSV_2825:HG4_Ill_manta_644:HG4_Ill_scalpel_2479:HG4_Ill_svaba_3335;NumExactMatchSVs=15;ClusterMaxShiftDist=0.017094;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.017094;PBcalls=4;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-116;DistBack=6300;DistForward=-116;DistMin=-116;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=2:206845194-206845316;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:17:./.:19:10:1:5:0|1:38:0:0:18:0/1:24:6:./.:.:.:.:.:.
chr2	208474478	HG2_PB_SVrefine2PBcRplusDovetail_6108	GAAATAGAAAACCTATTCCCTCCCTCTCCCTCTCCCTCCCCCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCCACGGTCTCCCTCTGATGCCGAGCCAAGGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCACCGCCACGCCTGACTGGTTTTCGGTTTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAGCCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTGCAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCGGAGAGCCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTGGGAAGCGAGGAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCGCCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAGCCCTGTCTGGGAGGTGGGGAGCGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCGGGAGGGAGGTGGGGGGGTCATCCTCCCACCTGGCCAGCTGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGTCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGAAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGGGGGGGGGGGGGGGGGTCGGCCAGCCGCCCGGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTTCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGACAGCCCCCCGCCCAGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCGTCTGCCCGGCCGTCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCACGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCCAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAATAAATTAATTAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2015:HG4_10X_allpass_476:HG3_10X_allpass_516:HG2_10X_allpass_414:HG4_Ill_MetaSV_2828:HG4_Ill_Krunchall_3834:HG2_Ill_Krunchall_3668:HG2_Ill_Krunchall_3667:HG3_Ill_MetaSV_2878:HG2_Ill_tnscope_290:HG4_PB_pbsv_2627:HG4_Ill_GATKHCSBGrefine_1828:HG3_PB_pbsv_2612:HG3_Ill_GATKHCSBGrefine_1772:HG2_PB_pbsv_2626:HG2_PB_SVrefine2PB10Xhap12_1963:HG2_Ill_breakscan11_357:HG2_Ill_GATKHCSBGrefine_1755:HG2_Ill_MetaSV_2745:HG4_PB_SVrefine2PBcRDovetail_1391:HG4_PB_SVrefine2Falcon1Dovetail_1582:HG4_Ill_SVrefine2DISCOVARDovetail_1984:HG3_PB_SVrefine2Falcon1Dovetail_1634:HG3_Ill_SVrefine2DISCOVARDovetail_1967:HG2_PB_SVrefine2PBcRplusDovetail_6108:HG2_PB_SVrefine2Falcon2Bionano_1116:HG2_PB_SVrefine2Falcon1plusDovetail_6586:HG2_Ill_SVrefine2DISCOVARplusDovetail_7216;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2015:HG4_PB_SVrefine2PBcRDovetail_1391:HG4_PB_SVrefine2Falcon1Dovetail_1582:HG4_Ill_SVrefine2DISCOVARDovetail_1984:HG3_PB_SVrefine2Falcon1Dovetail_1634:HG3_Ill_SVrefine2DISCOVARDovetail_1967:HG2_PB_SVrefine2PBcRplusDovetail_6108:HG2_PB_SVrefine2Falcon2Bionano_1116:HG2_PB_SVrefine2Falcon1plusDovetail_6586:HG2_Ill_SVrefine2DISCOVARplusDovetail_7216;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0634518;ClusterMaxSizeDiff=0.0634518;ClusterMaxEditDist=0.0634518;PBcalls=10;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2302;DistBack=-2303;DistForward=33259;DistMin=-2303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=2:208474479-208476797;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9983;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=2110.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:0:12:0:16:1/1:0:16:1:26:1/1:1:19:1/1:5:121:2191:.:.
chr2	208567225	HG4_Ill_SVrefine2DISCOVARDovetail_1986	TTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	CTTCCTGGGA	20	PASS	ClusterIDs=HG4_PB_HySA_3994:HG2_PB_PB10Xdip_16844:HG3_PB_HySA_4106:HG2_PB_HySA_5044:HG4_Ill_Krunchall_3836:HG3_Ill_Krunchall_3701:HG2_Ill_Krunchall_3669:HG3_10X_allpass_517:HG4_Ill_scalpel_2492:HG3_Ill_scalpel_2700:HG2_Ill_scalpel_2559:HG2_Ill_tnscope_291:HG4_PB_SVrefine2PBcRDovetail_1393:HG4_PB_SVrefine2Falcon1Dovetail_1584:HG4_Ill_manta_647:HG4_Ill_SVrefine2DISCOVARDovetail_1986:HG3_PB_SVrefine2Falcon1Dovetail_1636:HG3_Ill_manta_600:HG3_Ill_SVrefine2DISCOVARDovetail_1969:HG2_PB_assemblyticsfalcon_14685:HG2_PB_SVrefine2PBcRplusDovetail_6110:HG2_PB_SVrefine2PB10Xhap12_1966:HG2_PB_SVrefine2Falcon2Bionano_1118:HG2_PB_SVrefine2Falcon1plusDovetail_6588:HG2_Ill_manta_754:HG2_Ill_SVrefine2DISCOVARplusDovetail_7217:HG2_10X_SVrefine210Xhap12_2017:HG4_10X_allpass_477:HG2_10X_allpass_415:HG4_Ill_MetaSV_2831:HG3_Ill_MetaSV_2881:HG2_Ill_MetaSV_2746:HG4_Ill_Spiral_211:HG3_Ill_Spiral_2859:HG2_Ill_Spiral_177:HG3_PB_pbsv_2614:HG2_PB_pbsv_2628:HG3_Ill_Krunchall_3700:HG4_PB_assemblyticsfalcon_14445:HG3_PB_assemblyticsfalcon_14678:HG2_PB_assemblyticsPBcR_14284:HG4_PB_pbsv_2629;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2017:HG2_Ill_SVrefine2DISCOVARplusDovetail_7217:HG2_Ill_manta_754:HG2_PB_SVrefine2Falcon1plusDovetail_6588:HG2_PB_SVrefine2Falcon2Bionano_1118:HG2_PB_SVrefine2PB10Xhap12_1966:HG2_PB_SVrefine2PBcRplusDovetail_6110:HG2_PB_assemblyticsfalcon_14685:HG3_Ill_SVrefine2DISCOVARDovetail_1969:HG3_Ill_manta_600:HG3_PB_SVrefine2Falcon1Dovetail_1636:HG4_Ill_SVrefine2DISCOVARDovetail_1986:HG4_Ill_manta_647:HG4_PB_SVrefine2Falcon1Dovetail_1584:HG4_PB_SVrefine2PBcRDovetail_1393;NumExactMatchSVs=15;ClusterMaxShiftDist=0.135652;ClusterMaxSizeDiff=0.135652;ClusterMaxEditDist=0.135652;PBcalls=18;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-295;DistBack=-33;DistForward=-303;DistMin=-303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:208567225-208567529;PctSeqSimilarity=0.9658;PctSizeSimilarity=0.9966;PctRecOverlap=0.9738;SizeDiff=-1;StartDistance=-2;EndDistance=6;GTMatch=0;TruScore=97;MatchId=2111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:42:1/1:2:12:1:12:1/1:0:21:0:23:1/1:0:42:0/1:2:12:.:.:.
chr2	208959107	HG4_Ill_manta_648	CGCCCAGTTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2018:HG4_Ill_Krunchall_3838:HG3_Ill_Krunchall_3704:HG2_Ill_Krunchall_3673:HG3_PB_pbsv_2615:HG2_PB_pbsv_2629:HG3_PB_HySA_4109:HG4_PB_pbsv_2630:HG4_Ill_MetaSV_2832:HG3_Ill_MetaSV_2883:HG2_Ill_MetaSV_2747:HG4_PB_HySA_3996:HG4_Ill_scalpel_2495:HG4_Ill_manta_648:HG4_Ill_GATKHCSBGrefine_1833:HG3_Ill_scalpel_2705:HG3_Ill_manta_601:HG3_Ill_GATKHCSBGrefine_1777:HG3_10X_allpass_518:HG2_Ill_scalpel_2563:HG2_Ill_manta_755:HG2_Ill_breakscan11_358:HG2_Ill_GATKHCSBGrefine_1760:HG2_Ill_tnscope_292:HG2_Ill_Krunchall_3672:HG4_PB_SVrefine2Falcon1Dovetail_1585:HG3_PB_SVrefine2Falcon1Dovetail_1637:HG2_PB_SVrefine2Falcon2Bionano_1119:HG2_PB_SVrefine2Falcon1plusDovetail_6589:HG4_Ill_SVrefine2DISCOVARDovetail_1988:HG3_Ill_SVrefine2DISCOVARDovetail_1970:HG2_PB_SVrefine2PBcRplusDovetail_6111:HG2_PB_SVrefine2PB10Xhap12_1967:HG2_Ill_SVrefine2DISCOVARplusDovetail_7218;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1760:HG2_Ill_breakscan11_358:HG2_Ill_manta_755:HG2_Ill_scalpel_2563:HG3_10X_allpass_518:HG3_Ill_GATKHCSBGrefine_1777:HG3_Ill_manta_601:HG3_Ill_scalpel_2705:HG4_Ill_GATKHCSBGrefine_1833:HG4_Ill_manta_648:HG4_Ill_scalpel_2495:HG4_PB_HySA_3996;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0234604;ClusterMaxSizeDiff=0.0233236;ClusterMaxEditDist=0.120059;PBcalls=11;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-343;DistBack=-344;DistForward=-328;DistMin=-344;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=315;REFWIDENED=2:208958809-208959466;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:0:17:0:16:1/1:0:22:0:24:1/1:0:44:0/1:2:7:.:6162:.
chr2	209061157	HG4_Ill_SVrefine2DISCOVARDovetail_1990	TAGGAATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_359:HG2_10X_allpass_416:HG3_PB_assemblyticsfalcon_14685:HG2_PB_assemblyticsfalcon_14692:HG4_PB_assemblyticsfalcon_14452:HG2_PB_assemblyticsPBcR_14289:HG4_Ill_Krunchall_3841:HG2_Ill_Krunchall_3676:HG4_PB_pbsv_2634:HG4_PB_HySA_4000:HG4_Ill_MetaSV_2833:HG3_Ill_MetaSV_2884:HG2_Ill_tnscope_293:HG2_Ill_MetaSV_2748:HG4_PB_SVrefine2PBcRDovetail_1396:HG4_PB_SVrefine2Falcon1Dovetail_1590:HG4_Ill_scalpel_2498:HG4_Ill_manta_651:HG4_Ill_SVrefine2DISCOVARDovetail_1990:HG4_Ill_GATKHCSBGrefine_1835:HG4_10X_allpass_478:HG3_PB_pbsv_2619:HG3_PB_SVrefine2Falcon1Dovetail_1642:HG3_Ill_scalpel_2707:HG3_Ill_manta_603:HG3_Ill_GATKHCSBGrefine_1779:HG3_10X_allpass_519:HG2_PB_pbsv_2633:HG2_PB_SVrefine2PBcRplusDovetail_6114:HG2_PB_SVrefine2PB10Xhap12_1971:HG2_PB_SVrefine2Falcon2Bionano_1122:HG2_PB_SVrefine2Falcon1plusDovetail_6593:HG2_Ill_scalpel_2566:HG2_Ill_manta_758:HG2_Ill_SVrefine2DISCOVARplusDovetail_7222:HG2_Ill_GATKHCSBGrefine_1762:HG2_10X_SVrefine210Xhap12_2020;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2020:HG2_Ill_GATKHCSBGrefine_1762:HG2_Ill_SVrefine2DISCOVARplusDovetail_7222:HG2_Ill_manta_758:HG2_Ill_scalpel_2566:HG2_PB_SVrefine2Falcon1plusDovetail_6593:HG2_PB_SVrefine2Falcon2Bionano_1122:HG2_PB_SVrefine2PB10Xhap12_1971:HG2_PB_SVrefine2PBcRplusDovetail_6114:HG2_PB_pbsv_2633:HG3_10X_allpass_519:HG3_Ill_GATKHCSBGrefine_1779:HG3_Ill_manta_603:HG3_Ill_scalpel_2707:HG3_PB_SVrefine2Falcon1Dovetail_1642:HG3_PB_pbsv_2619:HG4_10X_allpass_478:HG4_Ill_GATKHCSBGrefine_1835:HG4_Ill_SVrefine2DISCOVARDovetail_1990:HG4_Ill_manta_651:HG4_Ill_scalpel_2498:HG4_PB_SVrefine2Falcon1Dovetail_1590:HG4_PB_SVrefine2PBcRDovetail_1396;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.0666667;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=1075;DistForward=281193;DistMin=1075;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=2:209061158-209061488;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:50:1/1:3:20:0:10:1/1:0:13:0:23:1/1:0:59:0/1:2:15:.:.:.
chr2	209942743	HG2_Ill_SVrefine2DISCOVARplusDovetail_7223	TTGTCAGGTCTCTGAGCCCAAGCCAAGCCATCGCATCCCCTCTGACTTGCAGGTATATGCCCAGATGGCCTGAAGTAACTGAAGAATCACAAAAGAAGTGAAAATGCCCTGCCCCGCCTTAACTGATGACATTCCACCAAAAAAGAAGTGTAAATGGCCGGTCCTTGCCTTAAGTGATGACATTACCTTGTGAAAGTCTTTTTCCTGGCTCATCCTGGCTCAAAAACTCCCCCACTGAGCACCTTGCGACCCCCACTCCTGCCCACCAGAGAACAAACCCCCTTTGACTGTAATTTTGCTTTACCTGCCCAAATCTTATAAAACGGCCCCACCCCTATCTCCCTTCTCTGACTCTCTTTTCGGACTCAGCCCGCCTGCACCCAGGTGAAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACACGGATGTGCATGAAATTTGGTGCCGTGACTCAGATCAGGGGACCTCCCTTGGGAGATTAATCCCCTGTCCTCCTTCTCTTTGCTCCGTGAGAAAGATCCACCTACAACCTCAGGTCCTCAGACCAGCCAGCCCAAGAAACATCTCACCAATGTCAAATCCAGTAAGCGGCCTAATTTTTACTCTCTTCTCCAACCTCCCTCACTATCCCTCAACCACTTTCTCCTTTCAATCTTGGCGCCACATTTCAATCTCTCCCTTCTCTTAATTTCAATTCCTTTCATTTTCTGGTAGAGACAAAGGAGACACGTTTTATCAGTGGACCCAAAACTCCGGCGCCGGTCATGGACTAGGGAAGGCAGCCTTCCCTTGGTGTTTAATCATTGCAGGGACACCTCTCTGATTATTCATCTACGTTTCAGAGGTGTCAGACCACGCAGGGACGCCTGCCTTGGTCCTTCACCCTTAGCAGCAAGTCCCGCTTTTCTGGGGAAGGAGCAAGTACCCCAACCCCTTCTCTCCATGTCTCTACCCCTTCTCTGCCTTTCTGGGGGGAAAGAAACCCCCAACCCCTTCTCCTTCACCCTTAGTGGCAAATCCCGCTTTTCTGGGGGAAGGGCAAGTACCCCAACCCCTTATATCTCTGTGCCCCAATCCCTTATTTCCATGCCCTGACCTCTTATATCTCTGTGCCCCGATCCCTTATTTCCGTGCCCCAACCTCTTATATCCCTGTACCCCAATCCCTTATTTCCACACCCCGACCTTGTATCTCTGCACCCTGACCCCTTTCCTGCTTTTCTGGAGGGTAAGAACCCCCGAACCCCTTCCCTCTGTGTCTCTACTCTCCCTTTTCTTTAAACTTGCCTCCTTTGCTATAGGCAACCTTCCACCCTCCATTCCTCCTTCTTCTCCCTTAGCCTGTGTTCTCAAAAACTTAAAACCTCTTCAACTCACACCTGACCTAAAACCTAAATGTCTTATTTTCTTCTGCAATGCTGCTTGACCCCAATACAAACTCGACAGTAGTTCCAAATAGCCAGAAAATGGCACTTTCAATTTTTCCATCCTGCAAGATCCAAATAATTCTTGTCGTAAAATAGGCAAACGGTCTGAGGTGCCTGACGTCTAGGCATCCTTTTACACATCAGTCCCTTCCTAGTCTCTGTGCCCAATGCAACTAATCCCAAATCTTCCTCCTTTCCCTCCCGCCTGTCCCCTCAGTACCAACCCCAAGCGTCGCTGAGTCTTTCTAATCTTCCTTTTCTACAGACCCATCTGACCTCTCCCCTCCTCACCAGGTCGAGCTAGGTCCCAATTCTTCTTCAGCCTCCGCTCCTCCACCCTATAATCCTTTTATCACCTCCCCTCCTCACACCTGGTCCAGCTTACAGTTTCATTCTGTGACTAGCCCTCCCCCACCTGCCCAGCAATTTCCTCTTAAAAAGGTGGCTGGAGCTAAAGGCATAGTCAAGGTTAATACTCCTTTTTCTTTATCTGACCTCTCCCAAATCAGTTAGCATTTAGACTCTTTTTCATCAAATATAAAAAACCCAGCCGAGTTCATGGCTAGTTTGGCAGCAACCCTGAGAGGCTTTACAGCCCTAGACCCTAAAAAGTCAAAAGGCCATCTTATTCTCAATATAGATTTTATTACCCAATCTGCTCCTGACATTAAATAAAACTCCAAAAATTAAATTCCGGCCCTCAAACTCCACAACAGGACTTCATTAACCTCGCCTTCAAGGTGTACAATAATAGAAAAAAGTTGCAATTCCTTGCCTCCACTGTGAGACAAACCCTAGCCATATCTCCAGCACACAAGAACTTCCAAACACCTGAACTGCAGCAGCCAGGTGTTCCTCCAGGCCTGCCACCCCCAGAAGCTTGCTACAAGTGCCAGAAATCTGGTCACCAGGCCAAGGAATGCCCGCAGCCCGGGATTCCTCCTAAGCCGCGTCCCATCTGTGTGGGACCCCATTGAAAATTGGACTGTTCAGCTCACCTGGCAGGCACTCCCAGAGCCCCAGGGACTCTGGCCCAAGGCTCTCTGACTGACTCCTTCCCAAATCTTCTCTGCTTAGCAGCTGAAGACTGACACTGCCCAATCGCCTCGGAAGCCTATAGGACCATCACAGATGCTCTGGGTAACTCTCACAGTGGAGGGTAAGTCCATCCCCTTCTTAATCAATGCGGAGGCCACCCACTCCACATTACCTTATTTTCAAGGGCCTGTTTCCCTTGCCTCCATAACTGTTGTAGGTATTGACAGCCAGGCTTCTAAACCTCTTAAAACTCCCCAACTCTGGCGCCAACTTAGACAATACTCTTTTAAGCACTCCTTTTTAGTTATCCCCACCTGCCCAGTTCCCTTATTAGGCTGAGACACTTTAACTAAATTATCTGCTTCCCTGACTATTCCTGGGCTACAGCCACACCTCATTGCCACCTTTTCCCCCAGTTCAAAGCCTCCTTCACATACTCCTCTTGTATCCCCCCCACCTTAACCCACAAGTATAGGACACCTCTACTCCCTCCTTGGCCACTGATCATGCACCCCTTACCATCTCATTAAAACCTAATCACCCTTACCCCACTCAACGTCAATATCCCATCCCGCAGCACGCTTTAAAAAGATTAAAGCCTGTTATCACTTGCCTGCTACAGCATGGCCTTTTAAAGCCTATCAACTCTCCTTACAATTCCCCCGTTTTACCTGTCCTAAAACCAGACAAGCCTTACAAGTTAGTTCAGGATCTGCGCCTTATCAACCAAATTGTTTTGCCTATCCACCCTGTGGTGCCAAACCCATATACTCTCCTATCCTCAATACCTGCCTCTACAACCCATTATTCTGTTCTGGATCTCAAACATGCTTTCTTTACTATTCCTTTGCACCCTTAATCCCAGCCTCTCTTCGCTTTCACTTGGACTGACCCTGACACCCATCAAGCTCAGCAAATTACCTAGGCTGTACTGCCGCAAAGCTTCACAGACAGCCCCCATTACTTCAGTCAAGCCCAAATTTCTTCCTCATCTGTTACCTATCTCGGCATAATTCTCATAAAAACACACGTGCTTTCCCTGCCAATCATGTCCGACCGATCTCTCAAACCCCAGCACCTTCTACAAAACAACTCCTTTCCTTCCTAGGCATGGTTAGCATGGTCAGAATTCTTACACAAGAGCCAGGACCACACCCTGTAGCCTTTCTGTCCAAACAACTTAACCTTACTGTTTTAGCCTAGCCCTCATGTCTGCGTGCAGCAGCTGCCACTGCTTTAATACTTTTAGAGGCCCTCAAAATCACAAACTGTACTCAACTCACTCTCTATAGTTCTCATAACTTCCAAAATCTATTTTCTTCCTCATACCTGACGCATATGCTTTCTGCTTCCCGGCTCCTTCAGCTATACTCACTCTTTGTTGAGTCTCCCACAATTACCATTTTTCCTGGCCCGGACTTCAATCCGGCCTCCCACATTATTCCGGATACCACACCTGACCCTCATGACTGCATCTCTGTGAACCACCTGACGTTCACCCCATTTCCCCACATTTCCTTCTTCTCTGTTTCTCACCCTGATCACACTTGGTTTATTGATGGCAGTTCCACCAGGCCTAATTGCCACTCACCAGCAAAGGCAGGCTATGCTATAGTATCTTCCACATCTATCATTGAGGCTACCACTCTGCCCCCCTCCACTACCTCTCAGCAAGCCGAACTAGTTGCCTTAACTCAAGCCCTCACTCTTGCAAAAGGACTACACATCAATATCTATACTGATTCTAAATAGGCCTTTCATATTCTGCACCACCATGCGGTCATATGGGCTGAAAGAGGTTTTCTCACTGCACAAGGGTCCTCCATCATTAATGCCTCTTTAATAAAAACTCTACTCAAGGCCGCTTTACTTCCAAAGGAAGCTGGGGTCATTCACTGCAAGGGGCATCAAAAGGCGTCAGATCCCATTGCTCTAGGCAACGCTTATGCTGATAAGGTGGCAAGACAAGCAGCTAGCTCTCCAACTTCTGTCCCTCACATCCAGTTTTTTCTCCTTCACATCAGTCACTCCCACCTACTCCCCTGCTGAAACTTCCACCTATCAATCTCTTCCCACACAAGGCAAATGGTTCTTAGACCAAGGAAAATATCTCCTTCCAGCCTCACAGGCCCATTCTATTCTGTCGTCATTTCATAACCTCTTCCATGTAGGTTACAAGCTGCTAGCCCGTCTCTTAGAACCTCTCATTTCCTTTCCATCATGGAAATCTATCCTCGAGGAGATCATTTCTCAGTGTTCCATCTGCTATTCTACTACCCCTCATGGATTGTTCAGGCCTCCTCCCTTTCTACACATCAAGCTCGAGGATTTGTCCCTGCCCAGGACTGGCAAATTGACTTTACTCACATGCCTCGAGTCAGAAAACTAAAATATCTCTTAGTCTGGGTAGACACTTTCAATGGATGGGTAGAGGCCTTTCCTACAGGGTCTGAGAAGGCCACCACAGTCATTTCTTCCCTTCTGTCAGACATAATTCCTCAGTTTAGCCTTCCCACCTCTATACAGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCATTTTTTCAGGCTCTTAGTATTCAGGGAAACCTTTATATACCTTACAGTCCTCAGTCTTCAGGAAAAGTAAAACAGACTAATGGTCTTTTAAAAACACACCTCACCAAGCTCAGCCACCAACTTAAAAAGGACTGGACAATACTTTTACCACTTTCGCTTCTCAGAATTCAGGCCTGTCCTCAGAATGCTACAAGGTACAGCCCATTTAAGCTCCTGTATAGACGCTCCTTTTTATTAGGCCCCAGTCTCATTCCAGACACCAGACCGACTTAGACTGTGCCCCAAAAAACTTGTCAACCCTAGTATCTTCTGTCTAGTCATACTCCTATTCACCGTTCTCAACTACTCAAACATGCCCTACTCTTGTTTACACTGCCAGTTTACACTGTTTCTACAAGCCATCACAGCTGATATCTCCTGGTGCTATCCCCAAACCGCCACTCTTAACTCTTGAAGTAAATAAATAATCTTTGCTGGCAGGACTATGCTGAATCTCCTTAGGCACTCTCTAATCAGATGTCCTGGGTCCTCCCAATTCTTAGACCTTTTATACCTGTTTTTCTGCTTCTCTTATTCCATTTAGTTTTTCAATTTATACAAAACCGTATCCAGGCCATCACCAATAATTCTACACGACAAATGTTTCTTCTAACAACCCCACAATATCACCCCTTACCACAAAATCTTCCTTCAGCTTAATCTCTCCCACTCTAGGTTCCCACGCCGCCCCTAATCCCGCTCAAAGCAGCCCTGAGAAACATCACCCATTCTCTCTCTCCATACCACCCCCCGAAAATTTTCGCCGCCCCCACACTTCAACACTATTTTGTTTATTTTTCTTATTAATATAAGAAGGCAGGAA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7223:HG2_PB_pbsv_2635:HG4_PB_assemblyticsfalcon_14458:HG2_PB_assemblyticsfalcon_14697:HG2_PB_assemblyticsPBcR_14295:HG3_PB_assemblyticsfalcon_14692:HG3_PB_pbsv_2622:HG2_PB_HySA_5056:HG2_Ill_MetaSV_2749:HG3_Ill_MetaSV_2886:HG3_PB_pbsv_2621:HG4_PB_SVrefine2Falcon1Dovetail_1592:HG3_PB_SVrefine2PBcRDovetail_1316:HG3_PB_SVrefine2Falcon1Dovetail_1645:HG2_PB_pbsv_2634:HG2_PB_SVrefine2PBcRplusDovetail_6115:HG2_PB_SVrefine2PB10Xhap12_1972:HG2_PB_SVrefine2Falcon2Bionano_1123:HG2_PB_SVrefine2Falcon1plusDovetail_6594;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7223:HG4_PB_SVrefine2Falcon1Dovetail_1592:HG3_PB_SVrefine2PBcRDovetail_1316:HG3_PB_SVrefine2Falcon1Dovetail_1645:HG2_PB_pbsv_2634:HG2_PB_SVrefine2PBcRplusDovetail_6115:HG2_PB_SVrefine2PB10Xhap12_1972:HG2_PB_SVrefine2Falcon2Bionano_1123:HG2_PB_SVrefine2Falcon1plusDovetail_6594;NumExactMatchSVs=9;ClusterMaxShiftDist=0.191291;ClusterMaxSizeDiff=0.191291;ClusterMaxEditDist=0.191291;PBcalls=16;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-5909;DistBack=27101;DistForward=-5619;DistMin=-5619;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=450;REFWIDENED=2:209942744-209949102;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9998;PctRecOverlap=0.9618;SizeDiff=-1;StartDistance=-225;EndDistance=-226;GTMatch=0;TruScore=98;MatchId=2114.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:58:59:./.:26:15:25:14:0/0:7:0:37:0:0/0:62:4:0/1:402:186:6262:.:.
chr2	210349016	HG2_Ill_svaba_3276	TATTATCAAGAAGTCAAAGAAAATGTATTTGATGGCGAGGCGCAGTGGCTCACGCCCGTAATCCCAGCACTTTGGGAGGCCGAGGC	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_212:HG2_PB_HySA_5063:HG2_PB_pbsv_2638:HG4_PB_pbsv_2639:HG4_PB_HySA_4008:HG4_PB_SVrefine2PBcRDovetail_1399:HG4_Ill_svaba_3367:HG4_Ill_Krunchall_3856:HG4_Ill_GATKHCSBGrefine_1842:HG4_Ill_250bpfermikitraw_3645:HG4_10X_allpass_480:HG2_PB_SVrefine2PB10Xhap12_1973:HG2_PB_SVrefine2Falcon1plusDovetail_6596:HG2_Ill_svaba_3276:HG2_Ill_manta_760:HG2_Ill_Krunchall_3690:HG2_Ill_GATKHCSBGrefine_1766:HG2_Ill_250bpfermikitraw_3624:HG2_10X_SVrefine210Xhap12_2023;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2023:HG2_Ill_250bpfermikitraw_3624:HG2_Ill_GATKHCSBGrefine_1766:HG2_Ill_Krunchall_3690:HG2_Ill_manta_760:HG2_Ill_svaba_3276:HG2_PB_SVrefine2Falcon1plusDovetail_6596:HG2_PB_SVrefine2PB10Xhap12_1973:HG4_10X_allpass_480:HG4_Ill_250bpfermikitraw_3645:HG4_Ill_GATKHCSBGrefine_1842:HG4_Ill_Krunchall_3856:HG4_Ill_svaba_3367:HG4_PB_SVrefine2PBcRDovetail_1399;NumExactMatchSVs=14;ClusterMaxShiftDist=0.035503;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.118343;PBcalls=7;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-85;DistBack=17839;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=84;REFWIDENED=2:210349017-210349185;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:28:1|0:2:19:35:1:./.:18:3:0:15:0/1:28:21:./.:.:.:.:.:.
chr2	211770514	HG4_Ill_manta_654	TATAAGGGCCCTGAGAGCAAACTTAGACACCCCTTCAATTCCCTAAGTTATTGGTTTCTTGATCAAGATAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2026:HG3_PB_HySA_4131:HG2_PB_HySA_5077:HG3_PB_HySA_4130:HG3_PB_pbsv_2630:HG4_PB_pbsv_2645:HG2_PB_pbsv_2644:HG4_PB_HySA_4023:HG4_Ill_manta_654:HG4_Ill_Krunchall_3867:HG4_Ill_GATKHCSBGrefine_1848:HG4_Ill_250bpfermikitraw_3657:HG4_10X_allpass_481:HG3_Ill_scalpel_2717:HG3_Ill_Krunchall_3728:HG3_Ill_GATKHCSBGrefine_1788:HG3_Ill_250bpfermikitraw_3579:HG3_Ill_150bpfermikitraw_3463:HG2_PB_assemblyticsfalcon_14710:HG2_Ill_scalpel_2580:HG2_Ill_manta_762:HG2_Ill_GATKHCSBGrefine_1772:HG2_Ill_250bpfermikitraw_3632:HG2_Ill_150bpfermikitraw_3375:HG4_PB_SVrefine2PBcRDovetail_1403:HG4_PB_SVrefine2Falcon1Dovetail_1598:HG3_PB_SVrefine2PBcRDovetail_1320:HG3_PB_SVrefine2Falcon1Dovetail_1649:HG3_Ill_SVrefine2DISCOVARDovetail_1980:HG2_PB_SVrefine2PBcRplusDovetail_6119:HG2_PB_SVrefine2PB10Xhap12_1977:HG2_PB_SVrefine2Falcon2Bionano_1127:HG2_Ill_SVrefine2DISCOVARplusDovetail_7231;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3375:HG2_Ill_250bpfermikitraw_3632:HG2_Ill_GATKHCSBGrefine_1772:HG2_Ill_manta_762:HG2_Ill_scalpel_2580:HG2_PB_assemblyticsfalcon_14710:HG3_Ill_150bpfermikitraw_3463:HG3_Ill_250bpfermikitraw_3579:HG3_Ill_GATKHCSBGrefine_1788:HG3_Ill_Krunchall_3728:HG3_Ill_scalpel_2717:HG4_10X_allpass_481:HG4_Ill_250bpfermikitraw_3657:HG4_Ill_GATKHCSBGrefine_1848:HG4_Ill_Krunchall_3867:HG4_Ill_manta_654:HG4_PB_HySA_4023;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0425532;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.057971;PBcalls=15;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-70;DistBack=114153;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=2:211770508-211770652;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:1/1:1:19:1:16:1/1:0:8:0:12:1/1:0:43:./.:.:.:.:.:.
chr2	211794336	HG3_Ill_250bpfermikitraw_3582	CATATGTATATATTATATATACATATATATGTATATATTATATATACATATATATGTATATATTATATTATATATACATAT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3378:HG2_PB_pbsv_2645:HG2_PB_HySA_5084:HG3_PB_HySA_4134:HG4_PB_pbsv_2646:HG3_PB_pbsv_2631:HG4_Ill_manta_655:HG4_Ill_GATKHC_4434:HG4_Ill_GATKHCSBGrefine_1849:HG4_Ill_250bpfermikitraw_3660:HG4_Ill_150bpfermikitraw_3530:HG3_Ill_manta_606:HG3_Ill_Krunchall_3730:HG3_Ill_GATKHC_4509:HG3_Ill_GATKHCSBGrefine_1789:HG3_Ill_250bpfermikitraw_3582:HG3_Ill_150bpfermikitraw_3466:HG3_10X_allpass_521:HG2_Ill_manta_763:HG2_Ill_Krunchall_3700:HG2_Ill_GATKHC_4366:HG2_Ill_GATKHCSBGrefine_1773:HG2_Ill_250bpfermikitraw_3635;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3378:HG4_Ill_manta_655:HG4_Ill_GATKHC_4434:HG4_Ill_GATKHCSBGrefine_1849:HG4_Ill_250bpfermikitraw_3660:HG4_Ill_150bpfermikitraw_3530:HG3_Ill_manta_606:HG3_Ill_Krunchall_3730:HG3_Ill_GATKHC_4509:HG3_Ill_GATKHCSBGrefine_1789:HG3_Ill_250bpfermikitraw_3582:HG3_Ill_150bpfermikitraw_3466:HG3_10X_allpass_521:HG2_Ill_manta_763:HG2_Ill_Krunchall_3700:HG2_Ill_GATKHC_4366:HG2_Ill_GATKHCSBGrefine_1773:HG2_Ill_250bpfermikitraw_3635;NumExactMatchSVs=18;ClusterMaxShiftDist=0.189189;ClusterMaxSizeDiff=0.189189;ClusterMaxEditDist=0.230216;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-80;DistBack=-26;DistForward=24;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=2:211794335-211794434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2117.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:65:./.:5:54:0:0:1/1:0:9:0:13:1/1:1:37:./.:.:.:.:.:.
chr2	212551245	HG4_Ill_SVrefine2DISCOVARDovetail_2000	TGCCTCTAGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_213:HG3_PB_HySA_4144:HG2_PB_assemblyticsfalcon_14719:HG4_PB_assemblyticsfalcon_14484:HG3_PB_assemblyticsfalcon_14721:HG4_Ill_Krunchall_3878:HG3_Ill_Krunchall_3743:HG2_Ill_Krunchall_3708:HG3_Ill_Spiral_2887:HG2_Ill_Spiral_178:HG3_PB_pbsv_2637:HG4_PB_HySA_4038:HG2_PB_HySA_5094:HG4_Ill_MetaSV_2837:HG3_Ill_MetaSV_2890:HG2_Ill_tnscope_294:HG4_PB_pbsv_2651:HG4_PB_SVrefine2PBcRDovetail_1407:HG4_PB_SVrefine2Falcon1Dovetail_1603:HG4_Ill_svaba_3388:HG4_Ill_scalpel_2516:HG4_Ill_manta_656:HG4_Ill_SVrefine2DISCOVARDovetail_2000:HG4_Ill_GATKHCSBGrefine_1856:HG4_10X_allpass_482:HG3_PB_SVrefine2PBcRDovetail_1323:HG3_PB_SVrefine2Falcon1Dovetail_1654:HG3_Ill_svaba_3416:HG3_Ill_scalpel_2724:HG3_Ill_manta_607:HG3_Ill_SVrefine2DISCOVARDovetail_1985:HG3_Ill_GATKHCSBGrefine_1799:HG3_10X_allpass_522:HG2_PB_pbsv_2650:HG2_PB_SVrefine2PBcRplusDovetail_6122:HG2_PB_SVrefine2Falcon2Bionano_1130:HG2_PB_SVrefine2Falcon1plusDovetail_6603:HG2_Ill_svaba_3300:HG2_Ill_scalpel_2585:HG2_Ill_manta_765:HG2_Ill_breakscan11_361:HG2_Ill_SpiralSDKrefine_9350:HG2_Ill_SVrefine2DISCOVARplusDovetail_7237:HG2_Ill_MetaSV_2753:HG2_Ill_GATKHCSBGrefine_1780:HG2_10X_SVrefine210Xhap12_2030;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2030:HG2_Ill_GATKHCSBGrefine_1780:HG2_Ill_MetaSV_2753:HG2_Ill_SVrefine2DISCOVARplusDovetail_7237:HG2_Ill_SpiralSDKrefine_9350:HG2_Ill_breakscan11_361:HG2_Ill_manta_765:HG2_Ill_scalpel_2585:HG2_Ill_svaba_3300:HG2_PB_SVrefine2Falcon1plusDovetail_6603:HG2_PB_SVrefine2Falcon2Bionano_1130:HG2_PB_SVrefine2PBcRplusDovetail_6122:HG2_PB_pbsv_2650:HG3_10X_allpass_522:HG3_Ill_GATKHCSBGrefine_1799:HG3_Ill_SVrefine2DISCOVARDovetail_1985:HG3_Ill_manta_607:HG3_Ill_scalpel_2724:HG3_Ill_svaba_3416:HG3_PB_SVrefine2Falcon1Dovetail_1654:HG3_PB_SVrefine2PBcRDovetail_1323:HG4_10X_allpass_482:HG4_Ill_GATKHCSBGrefine_1856:HG4_Ill_SVrefine2DISCOVARDovetail_2000:HG4_Ill_manta_656:HG4_Ill_scalpel_2516:HG4_Ill_svaba_3388:HG4_PB_SVrefine2Falcon1Dovetail_1603:HG4_PB_SVrefine2PBcRDovetail_1407:HG4_PB_pbsv_2651;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0996564;ClusterMaxSizeDiff=0.0996564;ClusterMaxEditDist=0.0996564;PBcalls=16;Illcalls=27;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=18;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-297;DistBack=12990;DistForward=691;DistMin=691;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:212551246-212551557;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:84:./.:0:0:0:0:1/1:0:16:0:14:1/1:0:39:./.:.:.:.:.:.
chr2	213574671	HG4_Ill_MetaSV_2838	CAAAATAGCAAGGCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAATCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_362:HG2_PB_assemblyticsfalcon_14727:HG2_PB_assemblyticsPBcR_14327:HG4_PB_assemblyticsfalcon_14491:HG3_PB_assemblyticsfalcon_14728:HG4_PB_pbsv_2656:HG2_Ill_Krunchall_3721:HG3_Ill_Spiral_2894:HG2_Ill_Spiral_179:HG2_PB_pbsv_2655:HG2_PB_HySA_5103:HG2_Ill_tnscope_295:HG2_Ill_MetaSV_2754:HG4_PB_SVrefine2PBcRDovetail_1408:HG4_PB_SVrefine2Falcon1Dovetail_1607:HG4_Ill_MetaSV_2838:HG4_Ill_GATKHCSBGrefine_1860:HG4_10X_allpass_484:HG3_PB_pbsv_2641:HG3_PB_SVrefine2PBcRDovetail_1327:HG3_PB_SVrefine2Falcon1Dovetail_1658:HG3_Ill_MetaSV_2891:HG3_Ill_GATKHCSBGrefine_1801:HG3_10X_allpass_523:HG2_PB_SVrefine2PBcRplusDovetail_6124:HG2_PB_SVrefine2PB10Xhap12_1980:HG2_PB_SVrefine2Falcon2Bionano_1133:HG2_PB_SVrefine2Falcon1plusDovetail_6606:HG2_Ill_scalpel_2594:HG2_Ill_manta_766:HG2_Ill_SVrefine2DISCOVARplusDovetail_7241:HG2_Ill_GATKHCSBGrefine_1783:HG2_10X_allpass_417:HG2_10X_SVrefine210Xhap12_2031;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2031:HG2_10X_allpass_417:HG2_Ill_GATKHCSBGrefine_1783:HG2_Ill_SVrefine2DISCOVARplusDovetail_7241:HG2_Ill_manta_766:HG2_Ill_scalpel_2594:HG2_PB_SVrefine2Falcon1plusDovetail_6606:HG2_PB_SVrefine2Falcon2Bionano_1133:HG2_PB_SVrefine2PB10Xhap12_1980:HG2_PB_SVrefine2PBcRplusDovetail_6124:HG3_10X_allpass_523:HG3_Ill_GATKHCSBGrefine_1801:HG3_Ill_MetaSV_2891:HG3_PB_SVrefine2Falcon1Dovetail_1658:HG3_PB_SVrefine2PBcRDovetail_1327:HG3_PB_pbsv_2641:HG4_10X_allpass_484:HG4_Ill_GATKHCSBGrefine_1860:HG4_Ill_MetaSV_2838:HG4_PB_SVrefine2Falcon1Dovetail_1607:HG4_PB_SVrefine2PBcRDovetail_1408;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0966667;ClusterMaxSizeDiff=0.0966667;ClusterMaxEditDist=0.0966667;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=3167;DistForward=37476;DistMin=3167;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:213574672-213574992;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:1:25:0:21:1/1:0:26:1:24:1/1:0:30:./.:2:14:.:.:.
chr2	213628277	HG2_Ill_250bpfermikitraw_3656	ATGTATGTATATATATATGTGTATATATATATATATATATATGTGTGTGTATATATATATATATATATATG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7242:HG3_Ill_GATKHC_4535:HG3_Ill_GATKHCSBGrefine_1802:HG2_Ill_GATKHC_4392:HG2_Ill_GATKHCSBGrefine_1785:HG2_PB_HySA_5104:HG4_PB_pbsv_2657:HG2_Ill_SpiralSDKrefine_9354:HG3_PB_pbsv_2642:HG3_Ill_scalpel_2731:HG3_Ill_250bpfermikitraw_3604:HG3_Ill_150bpfermikitraw_3489:HG2_Ill_250bpfermikitraw_3657:HG2_Ill_150bpfermikitraw_3400:HG3_PB_assemblyticsfalcon_14729:HG4_Ill_Krunchall_3895:HG4_Ill_GATKHC_4459:HG4_Ill_GATKHCSBGrefine_1861:HG4_Ill_250bpfermikitraw_3685:HG4_Ill_150bpfermikitraw_3556:HG2_Ill_manta_767:HG2_Ill_Krunchall_3722:HG2_Ill_GATKHC_4391:HG2_Ill_GATKHCSBGrefine_1784:HG2_Ill_250bpfermikitraw_3656:HG2_PB_pbsv_2656:HG4_Ill_SVrefine2DISCOVARDovetail_2003:HG2_PB_SVrefine2PBcRplusDovetail_6125:HG2_PB_SVrefine2PB10Xhap12_1981:HG2_PB_SVrefine2Falcon2Bionano_1134;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3656:HG2_Ill_GATKHCSBGrefine_1784:HG2_Ill_GATKHC_4391:HG2_Ill_Krunchall_3722:HG2_Ill_manta_767:HG4_Ill_150bpfermikitraw_3556:HG4_Ill_250bpfermikitraw_3685:HG4_Ill_GATKHCSBGrefine_1861:HG4_Ill_GATKHC_4459:HG4_Ill_Krunchall_3895;NumExactMatchSVs=10;ClusterMaxShiftDist=0.135338;ClusterMaxSizeDiff=0.135338;ClusterMaxEditDist=0.135338;PBcalls=8;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-70;DistBack=-27;DistForward=-44;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=2:213628276-213628353;PctSeqSimilarity=0.9818;PctSizeSimilarity=0.9714;PctRecOverlap=0.9155;SizeDiff=2;StartDistance=-6;EndDistance=-4;GTMatch=0;TruScore=95;MatchId=2120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:65:1/1:7:32:3:24:./.:2:3:0:9:1/1:3:40:./.:.:.:.:.:.
chr2	214507330	HG4_Ill_SVrefine2DISCOVARDovetail_2005	GAAAAGAGAGACTGGTCTACCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2035:HG4_Ill_Krunchall_3902:HG2_PB_pbsv_2659:HG2_PB_HySA_5110:HG2_PB_assemblyticsfalcon_14734:HG2_PB_assemblyticsPBcR_14334:HG4_PB_pbsv_2659:HG2_Ill_breakscan11_363:HG4_PB_HySA_4056:HG4_PB_SVrefine2PBcRDovetail_1410:HG4_PB_SVrefine2Falcon1Dovetail_1609:HG4_Ill_scalpel_2528:HG4_Ill_SVrefine2DISCOVARDovetail_2005:HG4_Ill_MetaSV_2840:HG4_Ill_GATKHCSBGrefine_1864:HG4_10X_allpass_485:HG3_PB_SVrefine2Falcon1Dovetail_1660:HG2_PB_SVrefine2PBcRplusDovetail_6128:HG2_PB_SVrefine2PB10Xhap12_1984:HG2_PB_SVrefine2Falcon2Bionano_1137:HG2_PB_SVrefine2Falcon1plusDovetail_6609:HG2_Ill_scalpel_2599:HG2_Ill_SVrefine2DISCOVARplusDovetail_7244:HG2_Ill_MetaSV_2756:HG2_Ill_GATKHCSBGrefine_1786:HG2_10X_allpass_418;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2035:HG4_PB_SVrefine2PBcRDovetail_1410:HG4_PB_SVrefine2Falcon1Dovetail_1609:HG4_Ill_scalpel_2528:HG4_Ill_SVrefine2DISCOVARDovetail_2005:HG4_Ill_MetaSV_2840:HG4_Ill_GATKHCSBGrefine_1864:HG4_10X_allpass_485:HG3_PB_SVrefine2Falcon1Dovetail_1660:HG2_PB_SVrefine2PBcRplusDovetail_6128:HG2_PB_SVrefine2PB10Xhap12_1984:HG2_PB_SVrefine2Falcon2Bionano_1137:HG2_PB_SVrefine2Falcon1plusDovetail_6609:HG2_Ill_scalpel_2599:HG2_Ill_SVrefine2DISCOVARplusDovetail_7244:HG2_Ill_MetaSV_2756:HG2_Ill_GATKHCSBGrefine_1786:HG2_10X_allpass_418;NumExactMatchSVs=18;ClusterMaxShiftDist=0.150862;ClusterMaxSizeDiff=0.150862;ClusterMaxEditDist=0.150862;PBcalls=13;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-239;DistBack=106642;DistForward=500;DistMin=500;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=2:214507331-214507587;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:38:0|1:22:0:0:33:0|1:26:0:0:12:0/1:15:16:./.:.:.:.:.:.
chr2	214775204	HG2_Ill_GATKHCSBGrefine_1787	TAAGAATTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTAGTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_180:HG2_PB_HySA_5116:HG3_PB_assemblyticsfalcon_14736:HG2_PB_assemblyticsPBcR_14338:HG4_Ill_Krunchall_3906:HG3_Ill_Krunchall_3765:HG3_PB_HySA_4162:HG4_Ill_GATKHCSBGrefine_1865:HG2_Ill_GATKHCSBGrefine_1788:HG2_PB_SVrefine2Falcon1plusDovetail_6610:HG3_Ill_MetaSV_2893:HG2_Ill_tnscope_296:HG4_PB_pbsv_2661:HG4_PB_SVrefine2PBcRDovetail_1411:HG4_PB_SVrefine2Falcon1Dovetail_1611:HG4_Ill_SVrefine2DISCOVARDovetail_2009:HG4_10X_allpass_486:HG3_PB_pbsv_2646:HG3_PB_SVrefine2PBcRDovetail_1329:HG3_PB_SVrefine2Falcon1Dovetail_1661:HG3_Ill_scalpel_2738:HG3_Ill_manta_610:HG3_Ill_SVrefine2DISCOVARDovetail_1996:HG3_Ill_GATKHCSBGrefine_1804:HG3_10X_allpass_524:HG2_PB_pbsv_2661:HG2_PB_SVrefine2PBcRplusDovetail_6129:HG2_PB_SVrefine2PB10Xhap12_1985:HG2_PB_SVrefine2Falcon2Bionano_1138:HG2_Ill_scalpel_2603:HG2_Ill_manta_768:HG2_Ill_SVrefine2DISCOVARplusDovetail_7247:HG2_Ill_MetaSV_2757:HG2_Ill_GATKHCSBGrefine_1787:HG2_10X_allpass_419:HG2_10X_SVrefine210Xhap12_2036:HG2_Ill_breakscan11_364:HG4_Ill_manta_658:HG4_Ill_MetaSV_2841:HG4_Ill_Spiral_215;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2036:HG2_10X_allpass_419:HG2_Ill_GATKHCSBGrefine_1787:HG2_Ill_MetaSV_2757:HG2_Ill_SVrefine2DISCOVARplusDovetail_7247:HG2_Ill_manta_768:HG2_Ill_scalpel_2603:HG2_PB_SVrefine2Falcon2Bionano_1138:HG2_PB_SVrefine2PB10Xhap12_1985:HG2_PB_SVrefine2PBcRplusDovetail_6129:HG2_PB_pbsv_2661:HG3_10X_allpass_524:HG3_Ill_GATKHCSBGrefine_1804:HG3_Ill_SVrefine2DISCOVARDovetail_1996:HG3_Ill_manta_610:HG3_Ill_scalpel_2738:HG3_PB_SVrefine2Falcon1Dovetail_1661:HG3_PB_SVrefine2PBcRDovetail_1329:HG3_PB_pbsv_2646:HG4_10X_allpass_486:HG4_Ill_SVrefine2DISCOVARDovetail_2009:HG4_PB_SVrefine2Falcon1Dovetail_1611:HG4_PB_SVrefine2PBcRDovetail_1411:HG4_PB_pbsv_2661;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0823723;ClusterMaxSizeDiff=0.0823723;ClusterMaxEditDist=0.0823723;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=-62;DistForward=-296;DistMin=-296;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=2:214775205-214775523;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:17:0:17:1/1:0:23:0:18:1/1:0:36:0/1:2:7:.:.:.
chr2	214778297	HG3_Ill_GATKHCSBGrefine_1805	ATATATGTACATGTACATATATGTATATGTACATGTACATATATGTATATGTACATGTACATATATG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_2647:HG3_PB_HySA_4163:HG4_Ill_GATKHC_4471:HG4_Ill_GATKHCSBGrefine_1866:HG2_Ill_Krunchall_3733:HG3_PB_assemblyticsfalcon_14737:HG2_PB_pbsv_2662:HG4_PB_HySA_4060:HG4_Ill_svaba_3405:HG4_Ill_Krunchall_3907:HG4_Ill_GATKHC_4470:HG4_Ill_250bpfermikitraw_3694:HG4_Ill_150bpfermikitraw_3567:HG3_Ill_svaba_3430:HG3_Ill_scalpel_2739:HG3_Ill_manta_611:HG3_Ill_Krunchall_3766:HG3_Ill_GATKHC_4548:HG3_Ill_GATKHCSBGrefine_1805:HG3_Ill_250bpfermikitraw_3615:HG3_Ill_150bpfermikitraw_3501:HG2_PB_assemblyticsPBcR_14339:HG2_Ill_svaba_3314:HG2_Ill_scalpel_2604:HG2_Ill_manta_769:HG2_Ill_Krunchall_3732:HG2_Ill_GATKHC_4404:HG2_Ill_GATKHCSBGrefine_1789:HG2_Ill_250bpfermikitraw_3668:HG2_Ill_150bpfermikitraw_3411:HG4_PB_pbsv_2662:HG4_PB_SVrefine2PBcRDovetail_1412:HG4_PB_SVrefine2Falcon1Dovetail_1612:HG3_PB_SVrefine2Falcon1Dovetail_1662:HG2_PB_SVrefine2Falcon1plusDovetail_6611:HG2_Ill_SVrefine2DISCOVARplusDovetail_7248:HG2_10X_SVrefine210Xhap12_2037;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3411:HG2_Ill_250bpfermikitraw_3668:HG2_Ill_GATKHCSBGrefine_1789:HG2_Ill_GATKHC_4404:HG2_Ill_Krunchall_3732:HG2_Ill_manta_769:HG2_Ill_scalpel_2604:HG2_Ill_svaba_3314:HG2_PB_assemblyticsPBcR_14339:HG3_Ill_150bpfermikitraw_3501:HG3_Ill_250bpfermikitraw_3615:HG3_Ill_GATKHCSBGrefine_1805:HG3_Ill_GATKHC_4548:HG3_Ill_Krunchall_3766:HG3_Ill_manta_611:HG3_Ill_scalpel_2739:HG3_Ill_svaba_3430:HG4_Ill_150bpfermikitraw_3567:HG4_Ill_250bpfermikitraw_3694:HG4_Ill_GATKHC_4470:HG4_Ill_Krunchall_3907:HG4_Ill_svaba_3405;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.0615385;PBcalls=11;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-66;DistBack=-63;DistForward=-62;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=47;REFWIDENED=2:214778294-214778406;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2123.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:42:1/1:1:18:1:12:./.:0:39:2:22:1/1:1:48:./.:.:.:.:.:.
chr2	214874703	HG4_Ill_SVrefine2DISCOVARDovetail_2010	GTGCATAAAGGAATCACCTGAGTAAAGATATGAAATCAATAATTCACACAAAAGTACTCTGTTTCCAAAGAAATTACTGAAATGCTATATTTTAAATTGTTTTTATATAATAAAATGTCAAAAGAGTTAAAATATTTTATTATGATTTGTAAGATGATAGATGCAAATAAAAAGCAGACTGAAAAAGATCAGGAAACAAGTGAACTAGAAAACAGAAATAAAAGCTTTTGATTGCTCTTCCCCTACCCAACACACAAATAGAATAAACATAATTGAGAGTTATAAAGAACAGATATTAAAAATGAAAAAAATAAGAATTGTAGAGAAAATATTAAACGTAAAGGCAAATTAGACAAAAAAGGACATAGTGTTTCTAAACAAAATAAATGGACTAAATTGAGGAGAAAGAGAAAAAAAAGTCACAGGGGAAGAAACTTTCCTGGAATAATAAAAGTCTAGGCATAATAGGTGGACCTTTCCATTAGGGTATGCTGTGCTAAAATTTCTGAACTTCAGTATTTGGGAAAGAAACTGTAAGGGCTCTTGGGTGTAAACAGCAAACGAACCCCAAAGAAGGTTGGATGGGAGATTGGAGAGACTAGACTGACCTCAGACTTTGCAGTACTCTAACAGTGAATTGTTTCTCCACAAACATTTGAGGAGGTCAGGTGACCCAAGAAATTATAACCAGCGAAACTGCTGTTGAAGTACTGAATAATCATTAAACTGTATAAAAGTATGGATGCAGAGGATTAATTTAAACATATATTAAACACTAGGAAGATGGGGAAGGAGGGACGCTGAGTTTGAGCTTTGTGATTACAGATCAAAATATGTGATGATTTTTGATATTCTAAATTTAACAATAAGATTTTTTTAAATTTCAGAGGTGAGTAAAAAGAAAGTGGGAGGAACATAAATACGTTATTTTCCTTTTTTCACTATACTTTTTATAAATGAAATGTTATTAAAATAATATACTTTAATATTTTTCTTAATGTTATCTTTTAGATAGTGATAGATCTTGTCTTGTAGTAAGAAAGTATCTACGTGACTTTCAGCAATGCCTTTAGTTATACTTATTTTATTGTTAAATTTCATATAATTTAATAATTTACCATTTTAATATAATAGGAATAAAATTCTTAATTTTTATCTCTCTCTTTTTCTCTCCCACCTCACCTCTCTGTCTCTCCATAGAGCTATAACTACAGTAATTATACTAATATTTAAAGATGATTATTTCAAGATAGTGGGCTTTGGAATAGAAACTTAAAAAATGTTCATACTTACATTTTTAGATTCATTAAAAATAGCAGGTAAAATTTGTACATAAAACAGTAATTTTTTAAAAGAAAATAACTTATTCTGTAAGTTTTGGCACTCTCCTCAAAAAAGATTAAATGTCATAAGTAAAACCCAAGTATACTCGTAAATATTCTAATATATTGGTATACTTCTTGGGTCAGCAAACTTTTCTTCAAAGGGCTATGAATTAAATATTTTTGATT	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_3735:HG2_PB_pbsv_2664:HG4_10X_allpass_487:HG2_10X_allpass_420:HG3_PB_assemblyticsfalcon_14738:HG3_PB_SVrefine2Falcon1Dovetail_1663:HG2_PB_assemblyticsPBcR_14341:HG4_PB_SVrefine2Falcon1Dovetail_1614:HG2_Ill_tnscope_297:HG4_PB_assemblyticsfalcon_14504:HG4_PB_SVrefine2PBcRDovetail_1414:HG4_Ill_SVrefine2DISCOVARDovetail_2010:HG4_Ill_MetaSV_2842:HG2_PB_SVrefine2PBcRplusDovetail_6130:HG2_PB_SVrefine2PB10Xhap12_1986:HG2_PB_SVrefine2Falcon1plusDovetail_6613:HG2_Ill_breakscan11_365:HG2_Ill_SpiralSDKrefine_9364:HG2_Ill_SVrefine2DISCOVARplusDovetail_7249:HG2_Ill_MetaSV_2758:HG2_Ill_GATKHCSBGrefine_1792:HG2_10X_SVrefine210Xhap12_2039:HG4_PB_pbsv_2664:HG4_Ill_Krunchall_3909;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2039:HG2_Ill_GATKHCSBGrefine_1792:HG2_Ill_MetaSV_2758:HG2_Ill_SVrefine2DISCOVARplusDovetail_7249:HG2_Ill_SpiralSDKrefine_9364:HG2_Ill_breakscan11_365:HG2_PB_SVrefine2Falcon1plusDovetail_6613:HG2_PB_SVrefine2PB10Xhap12_1986:HG2_PB_SVrefine2PBcRplusDovetail_6130:HG4_Ill_MetaSV_2842:HG4_Ill_SVrefine2DISCOVARDovetail_2010:HG4_PB_SVrefine2PBcRDovetail_1414;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00464037;ClusterMaxSizeDiff=0.00464037;ClusterMaxEditDist=0.00530328;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1510;DistBack=29253;DistForward=-1510;DistMin=-1510;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:214874704-214876215;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:66:43:1|0:7:23:42:4:0|1:64:0:0:33:0/1:50:19:0/1:110:59:1460:.:.
chr2	215411891	HG2_Ill_SVrefine2DISCOVARplusDovetail_7251	GAGGAAATTTTAGGAAAACAAATAGAATACTTGGGGTTAGTTTACTTCTGCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2041:HG3_PB_HySA_4177:HG3_Ill_Spiral_2909:HG2_Ill_Spiral_181:HG3_PB_pbsv_2650:HG2_PB_pbsv_2666:HG4_PB_assemblyticsfalcon_14511:HG4_PB_SVrefine2Falcon1Dovetail_1616:HG3_PB_SVrefine2PBcRDovetail_1331:HG3_Ill_svaba_3434:HG3_Ill_manta_612:HG3_Ill_SVrefine2DISCOVARDovetail_1999:HG3_Ill_Krunchall_3773:HG3_Ill_GATKHC_4557:HG3_Ill_GATKHCSBGrefine_1808:HG3_Ill_250bpfermikitraw_3623:HG3_Ill_150bpfermikitraw_3508:HG3_10X_allpass_525:HG2_PB_assemblyticsfalcon_14747:HG2_PB_SVrefine2PBcRplusDovetail_6132:HG2_PB_SVrefine2PB10Xhap12_1988:HG2_PB_SVrefine2Falcon2Bionano_1140:HG2_Ill_svaba_3319:HG2_Ill_manta_771:HG2_Ill_SpiralSDKrefine_9368:HG2_Ill_SVrefine2DISCOVARplusDovetail_7251:HG2_Ill_Krunchall_3742:HG2_Ill_GATKHC_4411:HG2_Ill_GATKHCSBGrefine_1794:HG2_Ill_250bpfermikitraw_3673:HG2_Ill_150bpfermikitraw_3416;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2041:HG3_PB_SVrefine2PBcRDovetail_1331:HG3_Ill_svaba_3434:HG3_Ill_manta_612:HG3_Ill_SVrefine2DISCOVARDovetail_1999:HG3_Ill_Krunchall_3773:HG3_Ill_GATKHC_4557:HG3_Ill_GATKHCSBGrefine_1808:HG3_Ill_250bpfermikitraw_3623:HG3_Ill_150bpfermikitraw_3508:HG3_10X_allpass_525:HG2_PB_assemblyticsfalcon_14747:HG2_PB_SVrefine2PBcRplusDovetail_6132:HG2_PB_SVrefine2PB10Xhap12_1988:HG2_PB_SVrefine2Falcon2Bionano_1140:HG2_Ill_svaba_3319:HG2_Ill_manta_771:HG2_Ill_SpiralSDKrefine_9368:HG2_Ill_SVrefine2DISCOVARplusDovetail_7251:HG2_Ill_Krunchall_3742:HG2_Ill_GATKHC_4411:HG2_Ill_GATKHCSBGrefine_1794:HG2_Ill_250bpfermikitraw_3673:HG2_Ill_150bpfermikitraw_3416;NumExactMatchSVs=24;ClusterMaxShiftDist=0.210526;ClusterMaxSizeDiff=0.210526;ClusterMaxEditDist=0.210526;PBcalls=10;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=14229;DistForward=-16;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=2:215411892-215411979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2125.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:22:./.:3:7:11:9:1|0:0:11:36:0:0/1:34:24:./.:.:.:.:.:.
chr2	215728761	HG2_Ill_SpiralSDKrefine_9370	ATACAAAAATCAGTAGCATTTGTGTATGCCAACAGTGAACAATGTGAGAAAGAAATCAAGAAGTAAAGAGTACAGACAACTCTGGAGGGGAAAATCTACGAATCTGATTAAAAATGAGCAAAAGATCTGAATAGACATTTTTTAGAAGAAGACATACAAATGGAAAGTGTATATGAAAAGGTACTTAACATCACTGGTCATCAGAGAAATGCAATCAAAAGTACAATGAGATAGCATCTCACCCCACTAAAGTGGCTTTTGTCCAAAAGTCAGGTAATAACAAATTCTCGCAAGGATATGGAGAAATGGGAACCCTCATTCACTGTTGGTGGGAATGTAAATTAGTACAACCACTATGGAGAACAGTTTAGAGGTTCCTCAAAAAACTAAAAATAGAACTACCATAAGATCCAGCAATCCCACTTTTAGGTATATACCCAAAAGAAAGGAAGTCAATCTATTGAAGAGGTATCTGCACTCCCAAGTTTATTGCAGCACTATTCACAATAGCTAAGATTTGGAAGCAACCTAAGTGTCTGTCCATCAACAGATGAATGTGTAATGAAAATGTACATATACGCAGTGGAGTACTATTCAGCCATAACTAAGAATGAGATTTGGTCATTTGCCACAACACAGATGAAACAGGAGGTCATTAAGTATAATAAGCCAAGCACAGAAAGACAAACATCACATGTTTTCACTTATCTGTGGGAGCTTAAAATTAAAACAGTTGAAGTCATGGAGATAGAGAGTAGAAGGATAGTTAACAGAGGCTGAGAAGGGTAGTTGGAGGGTGGGGGGAAGGAAGGGACGATGGTTAATGGGTACAAAAATATAATTAGAATAAATAAGATCTAGTATTTGCTAGCACAACAGTGTGACCATAGTAAAAATAATTTAATTGTTCATTTTAAAATAACTAAAAGAGTACAATTATATTGTTGGAAACACAAAGAATAAATGCCTGCGGTGATGGATATCCTATTTACTCTGATGTGATTAATATGCATTGTTTGCCTATATCAAAATATCTCCTGTAGCCCATAAACATATATACCTACTATGTACCCACAAAAACTGAAAATAAAAAATTAAAGGAATATATATGTCTACTAAATAGAATGACACATGCTGTCGTAGAGGTAAGCATGGACTTCTCTGGAAAGCACAGAGGACATGGACTTAGCTGAGATGATGGCAGCGCCATAAATGAAGGCTCTCTGGTGGCTATGTGGAGGAGGTGATATCGCCAGTTTTGAATAGGACAGTTAACTTGGGAAAAAAGGACAGTGTTTGGATGATCAAGGCTTTCCAAGAAGAAAGAACAAGAAATGGAAGGTCTGTAGCCTTTGACCGGATGGCAAAAAAGGATGAGATCATGAAGAATTTGTATTACATGGTAGTAAGAGTAAAGGTATGAATGCTGTACATAACTAGGCAGTTACTTTAATGAAGGGAATTACATCATCAGAATTGTGTTGTAGAAAATGTGGTCTGTCATTTGTGTGAAGTGTATATTGGAAGAGGGCAAAACCGGAAGTGGTATGGTAATCTAGACAAGAAGGATGATGCAATAGATGAGATTAAACCATCCATTCCCTTCTATTGGATAGAAGAATTTGTCCCCCTAGCTCCTGGGAGTGCTGCTGACAGGCAGTTCTCAGCTGTCAGCCCTCTACATAATTGCCTTAGCTAAATAGATTTCTCTCCTAAGGTCATTTTGCCCTCTCATGACAGCCCATATCCAATAACTGGTTAATGCAAATGAATAAAAACCCTTCCCCTTTCCTCCTGTATGAGGCAGAATTCCAAGATGATCCCCAAGATTCCAGGCCCCTGGTATATACACACCTTCTCCCAGTTATTCAATCAGATACTAATGTAAGTATTGCTGGGAAGGAATTTTGCAGGTATAATTAGGGTCTTAAATCAGCTGACCTTAAGATAGATTATCTAGGTGAGTCTGACCTATTCAAATGAACCTTTTAAAAGAAAGCTTTCTACAGCTGGTTGATGAAGGGGAAGTCAGTTATTAAAAGAAAGAGAAGGCTTTGACACAGCAAGTTGC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_2652:HG2_10X_allpass_421:HG3_10X_allpass_526:HG3_Ill_Krunchall_3774:HG3_PB_assemblyticsfalcon_14750:HG2_PB_assemblyticsfalcon_14751:HG2_Ill_tnscope_298:HG3_PB_SVrefine2PBcRDovetail_1333:HG3_PB_SVrefine2Falcon1Dovetail_1666:HG3_Ill_SVrefine2DISCOVARDovetail_2001:HG3_Ill_MetaSV_2894:HG3_Ill_GATKHCSBGrefine_1809:HG2_PB_pbsv_2668:HG2_PB_SVrefine2PBcRplusDovetail_6134:HG2_PB_SVrefine2PB10Xhap12_1991:HG2_PB_SVrefine2Falcon2Bionano_1142:HG2_PB_SVrefine2Falcon1plusDovetail_6616:HG2_Ill_breakscan11_366:HG2_Ill_SpiralSDKrefine_9370:HG2_Ill_MetaSV_2759:HG2_Ill_GATKHCSBGrefine_1795:HG2_10X_SVrefine210Xhap12_2044;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2044:HG2_Ill_GATKHCSBGrefine_1795:HG2_Ill_MetaSV_2759:HG2_Ill_SpiralSDKrefine_9370:HG2_Ill_breakscan11_366:HG2_PB_SVrefine2Falcon1plusDovetail_6616:HG2_PB_SVrefine2Falcon2Bionano_1142:HG2_PB_SVrefine2PB10Xhap12_1991:HG2_PB_SVrefine2PBcRplusDovetail_6134:HG2_PB_pbsv_2668:HG3_Ill_GATKHCSBGrefine_1809:HG3_Ill_MetaSV_2894:HG3_Ill_SVrefine2DISCOVARDovetail_2001:HG3_PB_SVrefine2Falcon1Dovetail_1666:HG3_PB_SVrefine2PBcRDovetail_1333;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0745372;ClusterMaxSizeDiff=0.0745372;ClusterMaxEditDist=0.0745372;PBcalls=10;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-2070;DistBack=14442;DistForward=-2070;DistMin=-2070;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:215728762-215730833;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:36:0|1:36:0:0:22:1|0:0:25:45:0:0/1:72:17:0/1:204:64:2206:.:.
chr2	216553774	HG3_PB_SVrefine2Falcon1Dovetail_1668	GGCTCAAGTGATCCTCCTGCCTCAGCCTCTGAGTAGCTGGGACTACAGACATGCACCACTGCACCTGGCTAATTTTTTGATTTTTTGAAGAGACAGGGCCTCTCTGTGTTGTCCAGGCTGGTCCCAAACTCCTTA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7253:HG3_Ill_GATKHCSBGrefine_1811:HG2_Ill_GATKHCSBGrefine_1797:HG3_Ill_MetaSV_2895:HG2_PB_pbsv_2672:HG3_PB_pbsv_2655:HG3_PB_HySA_4192:HG3_Ill_150bpfermikitraw_3518:HG3_10X_allpass_527:HG3_PB_SVrefine2PBcRDovetail_1334:HG3_PB_SVrefine2Falcon1Dovetail_1668:HG3_Ill_SVrefine2DISCOVARDovetail_2002:HG2_PB_SVrefine2Falcon2Bionano_1144;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7253:HG3_PB_SVrefine2PBcRDovetail_1334:HG3_PB_SVrefine2Falcon1Dovetail_1668:HG3_Ill_SVrefine2DISCOVARDovetail_2002:HG2_PB_SVrefine2Falcon2Bionano_1144;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0371747;ClusterMaxSizeDiff=0.0371747;ClusterMaxEditDist=0.0377358;PBcalls=6;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-134;DistBack=6073;DistForward=-123;DistMin=-123;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=162;REFWIDENED=2:216553775-216554070;PctSeqSimilarity=0.9878;PctSizeSimilarity=0.9925;PctRecOverlap=0.0963;SizeDiff=1;StartDistance=-122;EndDistance=-121;GTMatch=0;TruScore=69;MatchId=2127.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:35:0|1:29:1:2:30:./.:7:1:22:1:0/1:26:8:./.:.:.:.:.:.
chr2	220321615	HG4_Ill_150bpfermikitraw_3626	TGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAAAGAAAAGAAAAAAGAAAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_2694:HG3_PB_HySA_4219:HG2_PB_HySA_5188:HG4_PB_assemblyticsfalcon_14558:HG4_Ill_svaba_3457:HG4_Ill_scalpel_2571:HG4_Ill_manta_664:HG4_Ill_Krunchall_3970:HG4_Ill_GATKHC_4538:HG4_Ill_GATKHCSBGrefine_1890:HG4_Ill_250bpfermikitraw_3751:HG4_Ill_150bpfermikitraw_3626:HG4_CG_vcfBeta_1809:HG4_10X_allpass_493:HG3_PB_assemblyticsfalcon_14793:HG3_Ill_svaba_3468:HG3_Ill_scalpel_2774:HG3_Ill_manta_615:HG3_Ill_Krunchall_3812:HG3_Ill_GATKHC_4603:HG3_Ill_GATKHCSBGrefine_1824:HG3_Ill_250bpfermikitraw_3663:HG3_Ill_150bpfermikitraw_3552:HG2_PB_pbsv_2687:HG2_PB_assemblyticsPBcR_14392:HG2_Ill_svaba_3361:HG2_Ill_scalpel_2647:HG2_Ill_manta_777:HG2_Ill_Krunchall_3791:HG2_Ill_GATKHC_4460:HG2_Ill_GATKHCSBGrefine_1809:HG2_Ill_250bpfermikitraw_3718:HG2_Ill_150bpfermikitraw_3465:HG2_CG_vcfBeta_1640:HG2_10X_allpass_422:HG2_PB_assemblyticsfalcon_14800:HG3_PB_pbsv_2670;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_422:HG2_CG_vcfBeta_1640:HG2_Ill_150bpfermikitraw_3465:HG2_Ill_250bpfermikitraw_3718:HG2_Ill_GATKHCSBGrefine_1809:HG2_Ill_GATKHC_4460:HG2_Ill_Krunchall_3791:HG2_Ill_manta_777:HG2_Ill_scalpel_2647:HG2_Ill_svaba_3361:HG2_PB_assemblyticsPBcR_14392:HG2_PB_pbsv_2687:HG3_Ill_150bpfermikitraw_3552:HG3_Ill_250bpfermikitraw_3663:HG3_Ill_GATKHCSBGrefine_1824:HG3_Ill_GATKHC_4603:HG3_Ill_Krunchall_3812:HG3_Ill_manta_615:HG3_Ill_scalpel_2774:HG3_Ill_svaba_3468:HG3_PB_assemblyticsfalcon_14793:HG4_10X_allpass_493:HG4_CG_vcfBeta_1809:HG4_Ill_150bpfermikitraw_3626:HG4_Ill_250bpfermikitraw_3751:HG4_Ill_GATKHCSBGrefine_1890:HG4_Ill_GATKHC_4538:HG4_Ill_Krunchall_3970:HG4_Ill_manta_664:HG4_Ill_scalpel_2571:HG4_Ill_svaba_3457:HG4_PB_assemblyticsfalcon_14558;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0289855;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.0583942;PBcalls=9;Illcalls=24;TenXcalls=2;CGcalls=2;PBexactcalls=4;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=2;HG2count=14;HG3count=11;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-68;DistBack=25320;DistForward=6430;DistMin=6430;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=2:220321614-220321684;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:./.:0:3:0:0:1/1:0:7:0:7:1/1:0:52:./.:.:.:.:.:.
chr2	220748162	HG2_Ill_svaba_3364	TTCTTCAAATATTGTTTCTTCTCAATTCTTTCTCTTATCTTCCAAATATAATTACACATATATTAAATC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_182:HG3_PB_HySA_4224:HG2_PB_pbsv_2688:HG2_PB_HySA_5191:HG3_PB_pbsv_2671:HG4_PB_assemblyticsfalcon_14561:HG3_PB_assemblyticsfalcon_14795:HG3_Ill_svaba_3472:HG3_Ill_scalpel_2777:HG3_Ill_GATKHCSBGrefine_1825:HG3_Ill_250bpfermikitraw_3667:HG3_Ill_150bpfermikitraw_3557:HG2_PB_assemblyticsPBcR_14394:HG2_Ill_svaba_3364:HG2_Ill_SpiralSDKrefine_9404:HG2_Ill_GATKHCSBGrefine_1810:HG2_Ill_250bpfermikitraw_3722:HG2_10X_SVrefine210Xhap12_2062:HG2_PB_assemblyticsfalcon_14803:HG3_Ill_Spiral_2943;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2062:HG2_Ill_250bpfermikitraw_3722:HG2_Ill_GATKHCSBGrefine_1810:HG2_Ill_SpiralSDKrefine_9404:HG2_Ill_svaba_3364:HG2_PB_assemblyticsPBcR_14394:HG3_Ill_150bpfermikitraw_3557:HG3_Ill_250bpfermikitraw_3667:HG3_Ill_GATKHCSBGrefine_1825:HG3_Ill_scalpel_2777:HG3_Ill_svaba_3472:HG3_PB_assemblyticsfalcon_14795:HG4_PB_assemblyticsfalcon_14561;NumExactMatchSVs=13;ClusterMaxShiftDist=0.057971;ClusterMaxSizeDiff=0.057971;ClusterMaxEditDist=0.057971;PBcalls=8;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-68;DistBack=37304;DistForward=3758;DistMin=3758;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=74;REFWIDENED=2:220748163-220748304;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2129.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:42:0|1:32:1:1:40:0|1:29:1:0:13:0/1:27:23:./.:.:.:.:.:.
chr2	221345932	HG2_PB_SVrefine2PB10Xhap12_2003	TTTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCAGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAGAAAAAAACAAACAAACAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_3984:HG2_10X_allpass_423:HG4_PB_assemblyticsfalcon_14570:HG2_PB_assemblyticsfalcon_14809:HG3_PB_assemblyticsfalcon_14803:HG2_PB_PB10Xdip_16884:HG4_PB_HySA_4129:HG2_PB_assemblyticsPBcR_14400:HG2_PB_SVrefine2PB10Xhap12_2004:HG2_PB_PB10Xdip_16885:HG4_PB_pbsv_2700:HG4_Ill_manta_665:HG4_Ill_GATKHCSBGrefine_1894:HG4_10X_allpass_494:HG3_PB_pbsv_2674:HG3_Ill_MetaSV_2902:HG3_10X_allpass_529:HG2_PB_pbsv_2691:HG2_PB_SVrefine2PB10Xhap12_2003:HG2_Ill_GATKHCSBGrefine_1812:HG4_Ill_MetaSV_2854:HG2_Ill_MetaSV_2766:HG4_PB_SVrefine2PBcRDovetail_1430:HG4_PB_SVrefine2Falcon1Dovetail_1634:HG4_Ill_SVrefine2DISCOVARDovetail_2035:HG3_PB_SVrefine2Falcon1Dovetail_1685:HG2_PB_SVrefine2Falcon1plusDovetail_6632:HG2_Ill_SVrefine2DISCOVARplusDovetail_7266:HG2_10X_SVrefine210Xhap12_2064:HG2_PB_SVrefine2PBcRplusDovetail_6145;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1812:HG2_PB_SVrefine2PB10Xhap12_2003:HG2_PB_pbsv_2691:HG3_10X_allpass_529:HG3_Ill_MetaSV_2902:HG3_PB_pbsv_2674:HG4_10X_allpass_494:HG4_Ill_GATKHCSBGrefine_1894:HG4_Ill_manta_665:HG4_PB_pbsv_2700;NumExactMatchSVs=10;ClusterMaxShiftDist=0.310897;ClusterMaxSizeDiff=0.310897;ClusterMaxEditDist=0.310897;PBcalls=17;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=7251;DistForward=-324;DistMin=-324;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=2:221345926-221346265;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:38:0|1:38:0:2:34:1|0:0:20:33:0:0/1:37:8:0/1:21:4:.:.:.
chr2	221646985	HG2_Ill_GATKHCSBGrefine_1816	TTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_2678:HG2_PB_HySA_5209:HG4_Ill_GATKHCSBGrefine_1898:HG4_Ill_GATKHC_4553:HG3_Ill_GATKHC_4617:HG3_Ill_GATKHCSBGrefine_1831:HG2_Ill_GATKHC_4475:HG2_Ill_GATKHCSBGrefine_1816:HG3_PB_HySA_4238:HG4_PB_HySA_4133:HG4_Ill_manta_666:HG2_PB_assemblyticsfalcon_14812:HG2_PB_pbsv_2695:HG4_PB_pbsv_2703:HG4_PB_assemblyticsfalcon_14573:HG4_Ill_svaba_3468:HG3_Ill_svaba_3478:HG3_Ill_150bpfermikitraw_3569:HG2_Ill_svaba_3371:HG3_PB_assemblyticsfalcon_14806:HG2_PB_assemblyticsPBcR_14405;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1816:HG2_Ill_GATKHC_4475:HG3_Ill_GATKHCSBGrefine_1831:HG3_Ill_GATKHC_4617:HG4_Ill_GATKHC_4553;NumExactMatchSVs=5;ClusterMaxShiftDist=0.377358;ClusterMaxSizeDiff=0.377358;ClusterMaxEditDist=0.377358;PBcalls=10;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-52;DistBack=-58;DistForward=-23;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:221646984-221647039;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:53:1/1:2:26:2:16:./.:2:11:2:19:1/1:1:10:./.:.:.:.:.:.
chr2	221882974	HG3_Ill_GATKHCSBGrefine_1833	CAGTGTTCATGGCAGACAGCCTGTCTCAGTCTGGCTATCTGACCACCAGTGTTTCTGTGCCACCTGGCCAAGTGCTAATGAGAAAGTTGTATAGACGTTTGTTGCTTCACACAATAGGTAGAATAAAGGAGTTCACAGTTCCTCAAGAAGATTGAAAGGGACTCTGATATCTGGTGTGGACCAAATGCCAGCCAGGG	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_183:HG3_Ill_Krunchall_3829:HG2_Ill_Krunchall_3812:HG2_PB_HySA_5215:HG4_PB_assemblyticsfalcon_14579:HG2_PB_assemblyticsfalcon_14818:HG2_PB_assemblyticsPBcR_14410:HG3_Ill_MetaSV_2903:HG4_PB_SVrefine2Falcon1Dovetail_1637:HG3_PB_pbsv_2681:HG3_PB_assemblyticsfalcon_14811:HG3_PB_SVrefine2Falcon1Dovetail_1688:HG3_Ill_svaba_3484:HG3_Ill_GATKHCSBGrefine_1833:HG3_10X_allpass_530:HG2_PB_pbsv_2698:HG2_PB_SVrefine2PBcRplusDovetail_6149:HG2_PB_SVrefine2PB10Xhap12_2007:HG2_PB_SVrefine2Falcon1plusDovetail_6636:HG2_Ill_svaba_3378:HG2_Ill_breakscan11_367:HG2_Ill_SpiralSDKrefine_9412:HG2_Ill_MetaSV_2767:HG2_Ill_GATKHCSBGrefine_1818:HG2_10X_allpass_424:HG2_10X_SVrefine210Xhap12_2070:HG3_Ill_Spiral_2954;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2070:HG2_10X_allpass_424:HG2_Ill_GATKHCSBGrefine_1818:HG2_Ill_MetaSV_2767:HG2_Ill_SpiralSDKrefine_9412:HG2_Ill_breakscan11_367:HG2_Ill_svaba_3378:HG2_PB_SVrefine2Falcon1plusDovetail_6636:HG2_PB_SVrefine2PB10Xhap12_2007:HG2_PB_SVrefine2PBcRplusDovetail_6149:HG2_PB_pbsv_2698:HG3_10X_allpass_530:HG3_Ill_GATKHCSBGrefine_1833:HG3_Ill_svaba_3484:HG3_PB_SVrefine2Falcon1Dovetail_1688:HG3_PB_assemblyticsfalcon_14811:HG3_PB_pbsv_2681:HG4_PB_SVrefine2Falcon1Dovetail_1637;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0152284;ClusterMaxSizeDiff=0.0152284;ClusterMaxEditDist=0.0153061;PBcalls=12;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-196;DistBack=26638;DistForward=-194;DistMin=-194;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:221882975-221883172;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:51:0|1:24:4:0:46:0|1:37:0:0:24:0/1:42:22:./.:.:.:.:.:.
chr2	222202297	HG4_Ill_250bpfermikitraw_3771	AGAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_2700:HG4_Ill_manta_668:HG4_PB_pbsv_2706:HG4_Ill_250bpfermikitraw_3771:HG2_Ill_250bpfermikitraw_3744:HG2_Ill_150bpfermikitraw_3489:HG4_Ill_GATKHC_4558:HG4_Ill_GATKHCSBGrefine_1901:HG2_Ill_GATKHC_4483:HG2_Ill_GATKHCSBGrefine_1819:HG4_Ill_svaba_3474:HG2_PB_assemblyticsPBcR_14413;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3489:HG2_Ill_250bpfermikitraw_3744:HG4_Ill_250bpfermikitraw_3771:HG4_PB_pbsv_2706;NumExactMatchSVs=4;ClusterMaxShiftDist=0.333333;ClusterMaxSizeDiff=0.333333;ClusterMaxEditDist=0.333333;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-69;DistBack=-59;DistForward=-58;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=153;REFWIDENED=2:222202247-222202468;PctSeqSimilarity=0.9211;PctSizeSimilarity=0.8519;PctRecOverlap=0.8537;SizeDiff=-12;StartDistance=0;EndDistance=-12;GTMatch=0;TruScore=87;MatchId=2134.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:52:0|1:18:4:3:46:./.:1:12:22:8:0/1:26:19:./.:.:.:.:.:.
chr2	223481690	HG2_PB_SVrefine2Falcon1plusDovetail_6640	CAGAAAGATTGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_368:HG4_PB_assemblyticsfalcon_14589:HG2_PB_assemblyticsfalcon_14829:HG4_Ill_Krunchall_4000:HG3_Ill_Krunchall_3843:HG2_Ill_Krunchall_3824:HG3_PB_assemblyticsfalcon_14818:HG2_PB_assemblyticsPBcR_14426:HG3_Ill_Spiral_2967:HG2_Ill_Spiral_184:HG3_PB_pbsv_2688:HG2_PB_pbsv_2706:HG4_PB_pbsv_2713:HG4_PB_HySA_4150:HG2_PB_HySA_5234:HG4_Ill_MetaSV_2857:HG3_Ill_MetaSV_2904:HG2_Ill_MetaSV_2771:HG4_PB_SVrefine2PBcRDovetail_1436:HG4_PB_SVrefine2Falcon1Dovetail_1641:HG4_Ill_svaba_3484:HG4_Ill_scalpel_2587:HG4_Ill_manta_669:HG4_Ill_SVrefine2DISCOVARDovetail_2048:HG4_Ill_GATKHCSBGrefine_1905:HG4_10X_allpass_496:HG3_PB_SVrefine2PBcRDovetail_1348:HG3_PB_SVrefine2Falcon1Dovetail_1690:HG3_Ill_svaba_3497:HG3_Ill_scalpel_2794:HG3_Ill_manta_616:HG3_Ill_SVrefine2DISCOVARDovetail_2025:HG3_Ill_GATKHCSBGrefine_1835:HG3_10X_allpass_531:HG2_PB_SVrefine2PBcRplusDovetail_6152:HG2_PB_SVrefine2PB10Xhap12_2011:HG2_PB_SVrefine2Falcon2Bionano_1162:HG2_PB_SVrefine2Falcon1plusDovetail_6640:HG2_Ill_svaba_3390:HG2_Ill_scalpel_2669:HG2_Ill_manta_779:HG2_Ill_SpiralSDKrefine_9419:HG2_Ill_SVrefine2DISCOVARplusDovetail_7272:HG2_Ill_GATKHCSBGrefine_1820:HG2_10X_allpass_425:HG2_10X_SVrefine210Xhap12_2075;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2075:HG2_10X_allpass_425:HG2_Ill_GATKHCSBGrefine_1820:HG2_Ill_SVrefine2DISCOVARplusDovetail_7272:HG2_Ill_SpiralSDKrefine_9419:HG2_Ill_manta_779:HG2_Ill_scalpel_2669:HG2_Ill_svaba_3390:HG2_PB_SVrefine2Falcon1plusDovetail_6640:HG2_PB_SVrefine2Falcon2Bionano_1162:HG2_PB_SVrefine2PB10Xhap12_2011:HG2_PB_SVrefine2PBcRplusDovetail_6152:HG3_10X_allpass_531:HG3_Ill_GATKHCSBGrefine_1835:HG3_Ill_SVrefine2DISCOVARDovetail_2025:HG3_Ill_manta_616:HG3_Ill_scalpel_2794:HG3_Ill_svaba_3497:HG3_PB_SVrefine2Falcon1Dovetail_1690:HG3_PB_SVrefine2PBcRDovetail_1348:HG4_10X_allpass_496:HG4_Ill_GATKHCSBGrefine_1905:HG4_Ill_SVrefine2DISCOVARDovetail_2048:HG4_Ill_manta_669:HG4_Ill_scalpel_2587:HG4_Ill_svaba_3484:HG4_PB_SVrefine2Falcon1Dovetail_1641:HG4_PB_SVrefine2PBcRDovetail_1436;NumExactMatchSVs=28;ClusterMaxShiftDist=0.109735;ClusterMaxSizeDiff=0.109735;ClusterMaxEditDist=0.109735;PBcalls=17;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-289;DistBack=6467;DistForward=-274;DistMin=-274;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=2:223481691-223481995;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:0:16:1:14:1/1:0:25:0:22:1/1:0:33:./.:.:.:.:.:.
chr2	223760178	HG2_PB_SVrefine2PBcRplusDovetail_6154	TTACTTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAAGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGCTGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGTGCTGACCCCTCCACCTCCCTCCCGGACGGGGCGGCTGGCCGACCCCCCCCCCCGCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACTCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGAGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGGCTGATCCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCCGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACATCCCCACCTCCCTCCCGGACCGGGCGGCTGGCCAGGCAGGGGGCTGACCCCCCTCCCCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGACCGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTGGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGCTGCTGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACCTCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGTGGCGCTCCTCGCTTCCTAGATGGGATGGCGGACGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCATATCCCAGACGATGGGCGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTTGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCCATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCGGCCCGGCCAACACAGCAAAACCCCGTCTCCACCAAAAAAAAACGAAAACCAGTCAGGCGTGGTGACGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGACTCAGGCATGGAGGTTGCAGTGAGCCGAGATCGCAGCAGTACAGTCCAGCTTCGGCTCGGCATCAGAGGGAGACCGTGGAGAGGGAGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_369:HG2_10X_allpass_426:HG3_PB_assemblyticsfalcon_14823:HG2_PB_assemblyticsPBcR_14432:HG4_PB_assemblyticsfalcon_14593:HG2_PB_assemblyticsfalcon_14835:HG4_10X_allpass_497:HG3_10X_allpass_532:HG4_Ill_Krunchall_4006:HG2_Ill_Krunchall_3830:HG2_PB_HySA_5239:HG4_PB_pbsv_2716:HG4_PB_SVrefine2PBcRDovetail_1438:HG4_PB_SVrefine2Falcon1Dovetail_1643:HG4_Ill_SVrefine2DISCOVARDovetail_2050:HG4_Ill_MetaSV_2858:HG4_Ill_GATKHCSBGrefine_1906:HG3_PB_pbsv_2691:HG3_PB_SVrefine2PBcRDovetail_1351:HG3_PB_SVrefine2Falcon1Dovetail_1692:HG3_Ill_SVrefine2DISCOVARDovetail_2029:HG3_Ill_MetaSV_2905:HG3_Ill_GATKHCSBGrefine_1836:HG2_PB_pbsv_2709:HG2_PB_SVrefine2PBcRplusDovetail_6154:HG2_PB_SVrefine2PB10Xhap12_2014:HG2_PB_SVrefine2Falcon2Bionano_1165:HG2_PB_SVrefine2Falcon1plusDovetail_6642:HG2_Ill_SVrefine2DISCOVARplusDovetail_7274:HG2_Ill_MetaSV_2772:HG2_Ill_GATKHCSBGrefine_1821:HG2_10X_SVrefine210Xhap12_2077;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2077:HG2_Ill_GATKHCSBGrefine_1821:HG2_Ill_MetaSV_2772:HG2_Ill_SVrefine2DISCOVARplusDovetail_7274:HG2_PB_SVrefine2Falcon1plusDovetail_6642:HG2_PB_SVrefine2Falcon2Bionano_1165:HG2_PB_SVrefine2PB10Xhap12_2014:HG2_PB_SVrefine2PBcRplusDovetail_6154:HG2_PB_pbsv_2709:HG3_Ill_GATKHCSBGrefine_1836:HG3_Ill_MetaSV_2905:HG3_Ill_SVrefine2DISCOVARDovetail_2029:HG3_PB_SVrefine2Falcon1Dovetail_1692:HG3_PB_SVrefine2PBcRDovetail_1351:HG3_PB_pbsv_2691:HG4_Ill_GATKHCSBGrefine_1906:HG4_Ill_MetaSV_2858:HG4_Ill_SVrefine2DISCOVARDovetail_2050:HG4_PB_SVrefine2Falcon1Dovetail_1643:HG4_PB_SVrefine2PBcRDovetail_1438:HG4_PB_pbsv_2716;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0100503;ClusterMaxSizeDiff=0.0100503;ClusterMaxEditDist=0.0100503;PBcalls=16;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2493;DistBack=53917;DistForward=34686;DistMin=34686;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=2:223760179-223762684;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2136.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:105:./.:0:5:0:3:1/1:0:21:0:19:1/1:0:33:1/1:3:143:2478:.:.
chr2	223797358	HG3_PB_SVrefine2PBcRDovetail_1352	TAAAAGCATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_185:HG2_10X_allpass_427:HG4_Ill_Krunchall_4007:HG3_Ill_Krunchall_3849:HG2_Ill_Krunchall_3831:HG3_PB_assemblyticsfalcon_14824:HG2_PB_assemblyticsPBcR_14433:HG4_PB_assemblyticsfalcon_14594:HG2_PB_assemblyticsfalcon_14836:HG4_PB_pbsv_2717:HG2_PB_pbsv_2710:HG4_PB_HySA_4152:HG4_Ill_MetaSV_2859:HG3_Ill_MetaSV_2906:HG2_PB_HySA_5240:HG2_Ill_tnscope_299:HG2_Ill_MetaSV_2773:HG4_PB_SVrefine2PBcRDovetail_1439:HG4_PB_SVrefine2Falcon1Dovetail_1644:HG4_Ill_manta_670:HG4_Ill_SVrefine2DISCOVARDovetail_2051:HG4_Ill_GATKHCSBGrefine_1907:HG4_10X_allpass_498:HG3_PB_pbsv_2692:HG3_PB_SVrefine2PBcRDovetail_1352:HG3_PB_SVrefine2Falcon1Dovetail_1693:HG3_PB_HySA_4260:HG3_Ill_manta_617:HG3_Ill_SVrefine2DISCOVARDovetail_2030:HG3_Ill_GATKHCSBGrefine_1837:HG3_10X_allpass_533:HG2_PB_SVrefine2PBcRplusDovetail_6155:HG2_PB_SVrefine2PB10Xhap12_2015:HG2_PB_SVrefine2Falcon2Bionano_1166:HG2_PB_SVrefine2Falcon1plusDovetail_6643:HG2_Ill_scalpel_2675:HG2_Ill_manta_780:HG2_Ill_SVrefine2DISCOVARplusDovetail_7275:HG2_Ill_GATKHCSBGrefine_1822:HG2_10X_SVrefine210Xhap12_2078:HG2_Ill_breakscan11_370:HG3_Ill_Spiral_2973;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2078:HG2_Ill_GATKHCSBGrefine_1822:HG2_Ill_SVrefine2DISCOVARplusDovetail_7275:HG2_Ill_manta_780:HG2_Ill_scalpel_2675:HG2_PB_SVrefine2Falcon1plusDovetail_6643:HG2_PB_SVrefine2Falcon2Bionano_1166:HG2_PB_SVrefine2PB10Xhap12_2015:HG2_PB_SVrefine2PBcRplusDovetail_6155:HG3_10X_allpass_533:HG3_Ill_GATKHCSBGrefine_1837:HG3_Ill_SVrefine2DISCOVARDovetail_2030:HG3_Ill_manta_617:HG3_PB_HySA_4260:HG3_PB_SVrefine2Falcon1Dovetail_1693:HG3_PB_SVrefine2PBcRDovetail_1352:HG3_PB_pbsv_2692:HG4_10X_allpass_498:HG4_Ill_GATKHCSBGrefine_1907:HG4_Ill_SVrefine2DISCOVARDovetail_2051:HG4_Ill_manta_670:HG4_PB_SVrefine2Falcon1Dovetail_1644:HG4_PB_SVrefine2PBcRDovetail_1439;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0541401;ClusterMaxSizeDiff=0.0541401;ClusterMaxEditDist=0.0541401;PBcalls=18;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=34686;DistForward=18820;DistMin=18820;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=2:223797359-223797684;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:1/1:0:18:1:16:1/1:0:28:0:15:1/1:0:52:0/1:2:8:.:.:.
chr2	225723080	HG2_Ill_breakscan11_372	AATATATAACTGGTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCGGCACTTTGGAAGGCTGAGGTGGGGGG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_187:HG2_PB_pbsv_2719:HG2_PB_assemblyticsPBcR_14451:HG4_PB_pbsv_2723:HG4_Ill_svaba_3496:HG4_Ill_scalpel_2601:HG4_Ill_SVrefine2DISCOVARDovetail_2059:HG4_Ill_Krunchall_4025:HG4_Ill_GATKHC_4597:HG4_Ill_GATKHCSBGrefine_1910:HG4_Ill_250bpfermikitraw_3801:HG4_Ill_150bpfermikitraw_3671:HG4_10X_allpass_500:HG2_Ill_svaba_3402:HG2_Ill_scalpel_2684:HG2_Ill_manta_783:HG2_Ill_breakscan11_372:HG2_Ill_SpiralSDKrefine_9436:HG2_Ill_Krunchall_3850:HG2_Ill_GATKHC_4518:HG2_Ill_GATKHCSBGrefine_1826:HG2_Ill_250bpfermikitraw_3772:HG2_Ill_150bpfermikitraw_3514:HG2_10X_SVrefine210Xhap12_2087;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2087:HG2_Ill_150bpfermikitraw_3514:HG2_Ill_250bpfermikitraw_3772:HG2_Ill_GATKHCSBGrefine_1826:HG2_Ill_GATKHC_4518:HG2_Ill_Krunchall_3850:HG2_Ill_SpiralSDKrefine_9436:HG2_Ill_breakscan11_372:HG2_Ill_manta_783:HG2_Ill_scalpel_2684:HG2_Ill_svaba_3402:HG4_10X_allpass_500:HG4_Ill_150bpfermikitraw_3671:HG4_Ill_250bpfermikitraw_3801:HG4_Ill_GATKHCSBGrefine_1910:HG4_Ill_GATKHC_4597:HG4_Ill_Krunchall_4025:HG4_Ill_SVrefine2DISCOVARDovetail_2059:HG4_Ill_scalpel_2601:HG4_Ill_svaba_3496;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0273973;PBcalls=3;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-72;DistBack=152173;DistForward=12379;DistMin=12379;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:225723081-225723154;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:42:0|1:35:8:2:19:1|0:0:13:27:0:0/1:29:22:./.:.:.:.:.:.
chr2	227165424	HG4_PB_SVrefine2PBcRDovetail_1446	AGTTAAGCAAAAGTCGAGTGTGAGCATTGTGGCTTTGGACAACCTGTGTAGTTAGAATTCTGAAAAATTGGCTGAAGCATTCATTTCCTTTATCTAGCAAACCTTCACAACAACCCACAGTACACCTGCTTTCTATAAACTGTAAGGTGATGGGGTTTTGCATCAGGTTATCAACCACCTCCACCATTTAGTTATCACTCTTTAGTAATCCAAAGTGATGTCAAACACACTAACTACCACCAGAACAATTTCAGTTCAGCTAATAGCCTCTCAGTTTGCAAAAGCCATAAAGACTGTATCCATTGGCATTTCTCTTCTCCCCATCTCAAGAAACAGTGGCTTTCCCATTTGCCTGGCAGCTTGCCAAAGAAACAGGCAGTTAGTTAACACAGAGCTGTCAATAATCCATGGTAGCTAGACTTTATAAAGTAATCAGGAGGGGATATCATTTAATCAAGGTCTTCGAAATATGGAGAAGCAATTGGGATTGCTAATCAGGTAATTGCAGGGGAGAATTGCTCAGAAATAATTTGTATTGAACTGATGGAACAGCAAGTCCAGGCTACAATGGGGAGCAGGAATTTTTATGCTAGTGTCATCCTTACTATAATTGGTAATCTTTGTGCAGTGTGCAAATGAGATGGGAATCCATTCTTCCATGGTGCTTGGCTCCCTAAATGTCACATATCTGGCTTGTGCAAGTCACAGATATTGACTAGGCTGTCTCTGGAGAAACCAGACTTGGCTGAACCTTTGAAAGAAAATATGGACACAATGGATCACATTCAAAGTCACTTACATATTGACCTGATTATATCAAAATATGTGATTATGAATAACATGAGCTTCTACCCCGGTAGGGAATTTAACATCCTGTAGACTTTTCTCAAAAATTCCAAGGAAATGTCTTACATGGACTCTTCTTGATTCACAATACATCTTCAGTAAGGATCCCTAGGAATATGAAAATTGGAAGTAATACAACACTAAACATATTCCGATTTTTATTGACTCACGTGATTTGTCAAGACTGCACATAATTATGACCCCTTCATCGTTGCAAGGATAATTTAAAAGAGTTTCCAATACTTTATAAAATAGAGCAAGATAGAATAAACTCAAAAATCAGCTAGAATATGAAATAAAATAAAACATTAACAGTATTAATGATTAAGAAAATTGCCATTTCATTTATTTATTTATTTCACTGGAAAAATAGTGAACATTTGCTCTGTAACTAGAGAGAGTGTATGCTGTTTTTCTCCACTGAACTTTTTGTGGATAGCTCACTGTAGATGCTTTTACTCTTCTATTTTCCTAATTTATAATATTCTACTAATTTTGCTGTATGTTGGAAAATAATAAATATGGAGTCAGACTCTATAGTGGAAGACTAATTCACCACTTGCTAGTTATCTGCCTTGAGGAAAGTTGATTACATTTCTGATTATTTGTTTCCTCCTAGAAAAATTGGGATAAAAATAAATACTGTCATAAAGTTTCATTGTTGTTTTAGGATGTAAAGTAATTGACCCCACTGCATGGAATATAGTCATTAGTTAATAAATTATAGCTATTAACAATGCTTCCTATTTTTTTGCCTACTTCGTTTCTAAGGTATACTGCAGAAAACTGCAATTCTTTCCTTAAGCAAAAGATGAAAATAATTACTAATGCCTTCCTCCTTTGACAGATGCCAATCTGAATTCCACAGCTTGATATGACCTAGACAGAATTTTATTAATCTGTACAAAGGTAACAGGAACAAAATTATTTAATATGGAGGTACTCTCAGCCTTAAACTATCTCTGGCCTGTTCATCCTACCTGTCAAAGAGAATCTTGGATTTTCCCACTAAACCTCCTCCAATCCCTGATCTTTATTCTCTAAAGAAGAGTTCTACATGACTGGCCTATAAAATCATGTGATGCAAACTTGGGAGTATAGAAAGGACTAGAAATGAAGAATAAAAATGAAAAGGTAACAAAAGAGAAGAGAGACATTATGGATGCAACAGTATCAGAGAAAAACATGTTGATGGAGAATGAAGACTATGAATAATGAGAGACCCTGGAGAAGTCGCTGTGCTTTACAGAATAGATGAACAGAGGAAAAGGACATTTAAAGAGTTGTGTCTAAGATTATTTCTTGAATCCGTTTTAAAATCATTAGAAAAATATGTAAAGGTTGAAATTGATGTTTAATAATACTGATTATTAGACAGTGTTTCTTTCAGAAAAACATACTGCTAATACTGAACCATGAGGCATCTTGAATTTTATTTGGGTTACACAAAACCTCCCACTCATTCCTTTCTTTTCTGCATAAACTGTCATCAAAGAGAGCTACCGATCTAGAAGAGAACTACAGGACTAGCCCTTAACTGGTGCTTTGTTTGCAAGGGAGGAGGAAGTTGAAAGATAGTTGTTATCTTGCAAACTGAGTGTTAATAATATTCTGTGTTATTCTGTGATTTGTAGAAAAAAAGTCTTTGAAAACAAGTATTACTATTATGCTAAATTTAATGTGCTATCATCCTATGATCCTGACTTGGATAGACTTAAAGAGGGACTGGTTTTAAGTCCCTCTTCAAAGACTCATGCTTTCATTAGGAACTCCACAGACGGTTTTCTATTTATTAGCCTACAAATATTTATTAATAATTTTGTGGTGACAGTGAAACTTTTTAAGGACTTAAAATTAGAATATAGCTTTCTTTTTTTTAAAAAAAGTCTATAAACAGCACAGAAATAAAAATTTATAAATGTCCTTCGCTCTTATTCAGGCTGAATATTGATCTAAAGCAAAGGAACTTACCATTTTAAAAAGTTCATATTTTTCCATAAGAACTTTCCCTATGATATCTCAAAAAGCCCTACAGAACATTAAAGCCTCTATATCCAAATAACACATGTTACTCCTGGCTGTATAATTATACTTAGATTGACAAATGATTCTAAATTTTATCTGAAGACTAAATACAAAAATAGCCAAGAGCATTAAGAGGAAAGGAATATAATGACAGGGACTTTACCAGCTGTTTATGAATATACAATCAGATATTAAAGTATATTATAAATGCACAACAATCTTAAAGGTATAGTAATGGCACAGAAAGAGACAAAACAGAAAGAACAAAAGCAAACTCTATCTCTATCGTGCAAGAATGTTGACATTTGAAATCAGTGATGGAAGAGTAGATAAATGGTGCTGAAAATAACTGGGTAAATATTGGCTAAAATGATCATCCCATTTTCATGCCTTTCATCACAAATAATTCTTGATGAAAAACAAAATAAACTACACATTCACATTAGTAGAAGAAAATGGTTTTCTTTCAACATTGAAACTCTAAAGGAAAATATTGATAAATTAAACTATGTAAGTTTATTTTAAAAGGCGTTTTTGAATTAATGAGAAAAATAATGGCTTATAAAATGTAATGACACAATTGACTAACCATATGGGGGAGAAAATGAATCTGATACCTGCCTCACTCCTTATCACAAAAAGCCTTTCAAATGCACCAGAAATATAATAATTTCTATTTATAATAAATGAAGATTCAGTAAAGATTATATTTTTAAAAAATTGTTCTATATTGTAAGACTAAAGGATAAGAAGGAAGTGACAAGCTGGGGGAAGTATTTGCAATATATGTTCAAATGTACTACTTTTATAATCAGCGAATAATATTCATTTTTGTAAACTACTAATGATGACATCAGTATTTCCATTTTGTTAACTTTTATTTGAGATGTTGATATATTTGGCGCCTGGTTTTCCCCAGATGAGTCATTTGAATTGAGGATATAGTTTTTAATAGTGCTAGAGTTCCTTTTCAATTCTGTAAAAGTACTACCCTTATTTAATTAGTTTCTTTAGTCATGTTATGAAATCTGTGACTTGATAGGAGAAAAAGAGGAACTTAATCTCAGAAATTTCCAACACACTTATAATACTTTCCTCTCAACTTTCCCCCCTTATATTATCACGATTTTTGATTCCCTTCACTCTTTTCTTCTTCCCTCCATCTTAGAATAAGAGGGCCACCTTCATTTTCTTTCCTATTCCAAAAGTAACATTATTTCATAGTATCACTTTTCTCTGAGGTTCAGCTCATCAAATTTGAATAGTTCGCTATTTTTTATAGCACTTCTCAGGGCAGGTCTAGTCTCTGTAAAATTGAATAATATTTGGCCTATCAAACACAGTGATCTAGAGCATAGAGCTTGAGACCGTTTAGTCCAACTTTACTGTTTTTCAGATAAAAACTGAGAGGTCTGCAAAGGTTCAGTGAGCCAACAGTCATCCATCTTGTTAGTGACAGAACTAGAACTTGACCCTGAGGTATCCTGGTCTTGTCCCCTTCCACATATGGCTGATAGGCAGCATTTAACACAGATAATCAGACCCTCAAAAGAAAACCATCTTACACTTCCTTTTATAGATGGAAAAGTTGAGGCCCAAAGAAGTAACTAGAACTAGCTTACGGTCAAGTTGTTATTGTTGACAGAGACGTGAACAGAAATTTCACGTTCTATTCTCAACACACAGAGAGGTTGTGTACAAATGAGGGGAAAAGCTGAACCTGGTGCAATGTGGAACCCTGCTTCCTAGTAACAAATCACTTGGGAACATTCTGAAAACTCAGTGCTGCCCTCATGAAGACTCACAGAACTCACTGGTAAATTAAATTAAGGTCCTGAGAAATCCTGCAGCAAATGAACTTATTATGCTTTGTATAACCCAGAATTTTCCAAATGCACGTGACCAGGAAACCCTTTGTCTCATAAAAACTGTGATCATCCGGCACAAATAGTGTTTCACTGGATATTTTGTGATATTTTTTGGTTGAGAGCAAAGAAACCTGAGCTTTAATTTCACATCTGCTAGTCCCTGTCCAGGTGCCCAGGGGTAAGTCTCTTAATTCACTTAACTTTGTTTATGTGTAACAAGAAAGAAGAGGGGAAAAACAAGTTCCAAAGTCTCTCTCATCTTTATAAGTGCTTTGTAGCTTCATCTGTTGTACATATTCTAAGGAAGGATACACACACACATACACTCCACACACAAATACACACATATGTACATAAATAAGATTACTAGTCAACATCCATAAGAATGTGTGTTTATGTACATATATGAAATATTTCTAGTTTCAACATGTTCCCTTTTCTCTTCTCCGAGTTAGTGGAGGAGTAGAAAGAATTGTACGTGGCACAAGACAATTCTGCTCACATCCCATTGGCTAGAACTCATGCCCATGACCACACCTAACTTGGGAAAAGTGGTCTAATTGTGCATTCAGGAGGGGAATGTGGATCTTGGGAGCAGAGAGGAGCAGTCTCTGAAGTTGTTTCACTGGATTTGATGTCCCATCCAATTGTAAATCTCAATGATCATAAGATATCCTAGAGTACCCTAAATGTGCTCATTATACGGCTTGGGGAAGGATATATACTTAAAAATAATGCACAATAAACTAGTTATTGAATGAGTGGTGTGAGGTGCTATATGATGTAGACTCATACAAGACTTAAAACATTAAATGAGAATTCAGAGACCTGGCTCTTCAGGTTTGGTATGTACCAGTGTAGGTTGCTTAATATTTCTCTGTTTCAGTTGCTTTAAATATAAAGAAAAGCCGGGTACAGTGGCTCACGCCTGTAATCTCAACACTTTGGGAGGCCAAGGCAGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTAGCGAACATG	A	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2919:HG3_10X_allpass_540:HG2_10X_allpass_431:HG2_PB_assemblyticsfalcon_14867:HG2_PB_assemblyticsPBcR_14469:HG2_Ill_tnscope_301:HG4_PB_pbsv_2733:HG4_PB_SVrefine2PBcRDovetail_1446:HG4_PB_SVrefine2Falcon1Dovetail_1652:HG4_Ill_MetaSV_2866:HG3_PB_pbsv_2709:HG3_PB_SVrefine2PBcRDovetail_1362:HG3_Ill_SVrefine2DISCOVARDovetail_2047:HG2_PB_pbsv_2726:HG2_PB_SVrefine2PBcRplusDovetail_6163:HG2_PB_SVrefine2PB10Xhap12_2025:HG2_PB_SVrefine2Falcon1plusDovetail_6652:HG2_Ill_breakscan11_373:HG2_Ill_SpiralSDKrefine_9445:HG2_Ill_MetaSV_2776:HG2_10X_SVrefine210Xhap12_2094;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2094:HG2_Ill_MetaSV_2776:HG2_Ill_SpiralSDKrefine_9445:HG2_Ill_breakscan11_373:HG2_PB_SVrefine2Falcon1plusDovetail_6652:HG2_PB_SVrefine2PB10Xhap12_2025:HG2_PB_SVrefine2PBcRplusDovetail_6163:HG2_PB_pbsv_2726:HG3_Ill_SVrefine2DISCOVARDovetail_2047:HG3_PB_SVrefine2PBcRDovetail_1362:HG3_PB_pbsv_2709:HG4_Ill_MetaSV_2866:HG4_PB_SVrefine2Falcon1Dovetail_1652:HG4_PB_SVrefine2PBcRDovetail_1446:HG4_PB_pbsv_2733;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00919261;ClusterMaxSizeDiff=0.00919261;ClusterMaxEditDist=0.00919261;PBcalls=11;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-5745;DistBack=10086;DistForward=2110;DistMin=2110;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:227165425-227171171;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:59:66:0|1:55:0:0:37:0|1:47:0:0:31:0/1:49:8:0/1:407:183:5786:.:.
chr2	229264344	HG2_PB_SVrefine2PB10Xhap12_2033	TAAGAATAATGAACCTGTTTTTTTTTTTTCCATTTACATGATAGGCCTTTACTTAGAACCTCTGGAGTGTCTTTACATAGAAATGGGTCTCTTGAGGACAACAGACAGTTGGGTATACTTTTTTATCCAACTTGCCACTCTATGCCTTTTACATGTTGCATTGAGACTATTTAAATTCAAAGTTAGTATTGATATGTGAGATTTTGATCCTGTCATCATGTTAGCTGAATGCTTTGTAGACTTGGTTGTGTAGTTGTTTTATAGTATCTGTGAGCTATGTACTTAAGTGTGCTTTTCTGGTAGCAGGTATTGTTCTTTTGTTTATATGTTTAGCATTCCCTTAAGAACCTCTTGTAAGACTGGTTTCATTGTAATGAATTCCCTATGTTTGCTTGTCTAAAAAGAATTTTATTTCTCCTTCAGTTATAAAGCTTAGTTTGGTGGGTTACAAAATTCTTGCTTGGAATTTCTTTTCTTTAAGGATGCTGAATATACGTCCCTAATCTCTTTTGGCTTCTAAGGTTTCTGCTGAGAGGTCCATTGCTAGCCTGGTGAGGATCCATTTGTACATAACCAGACCCTTCTCTCTAGCTTTCTTTAAGATTTTTTCTTTTGCATGTACTTTGGTGAATTTGTTAACTATGTGCCTTGGTGATGGTCCTCTTGTATAGTATTTCACAGGGGTTCTCTGTATTTATTGAATTTGCATGCCAACCTCTCTAGTGAGATTGGAGAAATTTTTGTGGACTATATCTTTAAGTATGTTGTCTATGCTATTTACTCTCTCTTTCACCCTCTGCAATGCCAGTGAGTTTTCGGTTTGATCCCTTTACATAATTCCATAATTCTTGGGCATTTTATTCATTTAAAAAAATTCTTCTTTGTTTATTTTCATCTGACTGAGTTGAATTGAAGAACCAGCCTTTGAGCTCTGAGATTTTTCCCTCAGCTTGGTCACTTCTGCTATGAATGCTTCCAACTGTATTTTGAAATTTTTGTAGGGAATTTTCAATTCCAGAACTTCAGTTTGAGTTTTTCTAATATTGACTATTTTATCTTTCAACTCTTGGATCATTTGACTGGATTCCTTGCATTTCTGGAATTGGGTTTCAGCTTTTTCTGAATCTTGATGAACTTCCTTGCCACCCAGATTCTGAATTTTGTGTCTGTCATTTCAATCATTTCAATGTGGCTAAGCAGTATTGTTGGGAAGCTAATGTGCTCATTTGAAGGTAAGGAGACCATCTGACTTTTTGAATTGCCAGAGTTCTTGTGCTGATTCTTTCCCATCTGAGAGGGCTGGTGTTCCTTTGCCTTTTTGTATTTGCTGCCATTTGGATGGGGCTTTTGTTTTTATATTCTTTATCTCCATTGAGAATTTAACTGTGGTATACATTGATTATAGTCAATTGGCTTCGGCTTCGTTTCTGCTTGCATTCAGTGGGCCAAGGCTCTGTGTGGGATTTTTTGTGACTTGATTCTTGCCCTGGGTTTCACAGGCAATGTATACTAGCAGAATATTTTTGATGTTGTAATTTGGGCTGCTATTCAGTAGATGGCGCTTAAAAGTCATGGCCAGCAGATAGGTGCTTACACAGTCACATGTCTCTTTTTTTTTTTGTTTCAGTGCCTTTGCAGTAGTTCTCTGTGATGGGTGATGGGAAAGAGATAACCCCATTACCGGGTCAACTCCCAGGCCTTAGGGGATCCCCTCTGATCGCTGGTGCTGCACCTGCATTTCCTTTGGTGTTTCTGGTTGCAAAGCTTCCTTGGGCAGAGGCTGCAGCTGGCAGACAGGCCACATCATTTGTGGATTGGCTCTGCAAAGGGAGAGCCCATGAGCCCATGCTTCTCACCCCTCTCAGTGTTCAGAGAGTGGGGTGGGGTGTCTTCCCCTATTCTAGTGCTGGCCACAGATCTCAGCTCAGCACTGCTGAGTTGTGTACTACAACCTTAGGGTGCTGCAACCAGGCTTCTGACTCTATCCTGAGGCCCCTCAGGGTCAGGAACTGGCTGGGCTGCAGGATTTGAAGTGCTCCCATGCTGGTGGGGAAGCATTTAAGTGGAGCCCTGGGCAAAGCACCTAGGCTCAGCAGCAGAGGCTGCACTGTGCACATGCTCCTGTGGGAGCAGCCAGGCAGGGAACTTGGGAAGGGTGGCAGGCAGGGGGGCCTGCTGAACACATGTGCCCCAGTACTGGGTGGTAAAGATGACCTTGTTCTCTCTTGGCCCTGGTGGTCAATTTAGAGTTACTTAAAGGAAATGGAGAGACTTGAGGGATGGGCCTCTATGGCTGCGTTCTGCTGCAGCTGCCCTGCTCACAAAATTCCCTGGCCTCTGGGCAGGCTGAAGCTCTGTTTCTGCCTACCCTAGGGGGCAGATCCCCCTGCCAATTCAAATGTCTACTGGGGTCCTGGGATCTTTTGTAGCTAAGATCCCAGAGGCCCGTGGCAAGAGTGGGCTGCCCCACCTGCACTTCACTCACACTTCCCTAGGAGTCGTCCTAAGGTGAGAGCTGGTCTCGGCTCTCGATTCCTCCTTCTACTGCCTTGGTAACTGCATTGCCTCTATTGACTCTAAGTCTACTTTTTTCATTTTATTTGTTGATATCTTTTACTTATTTTTCTATTAGTTTTTTTAAATTAACAGCTATTTAAAATTAAAGATATTAATCTTCTGTTTATATAAGTTCAAATTACTTTCCTAGTTTGTCACTCTAATTGTGGCATTTTTGAGGTATAACCATTTCAAAATGATGTGGTACCTATATTTCTTCTATATAGTTTTTCTGTATATCATTTGTAGAAAGGTTGTCTCTGTCACCAAAAGTATGATGCTTACCTATATTTTACGAGTAATATTGTTTCTTATTTTATATGCAAGTATTTGATACGTTTGATATTATTTTTATGAATTCATACAGGAATACAGAATTCATTTTTTCAATTTTTGTAGAAATGGCTAGTTATTTCAGAACCACTTAATGATTTATTCTTTTGTATTTATTTTAATATCAACATTGTCTTATATTCACATAGATTAAATATATATTAAATGTCTACATGACTTTAAACTATAGTACGTAGTATAGATTTATTCTAACTTACCTCTATAATCTTGTTTTACTTATCTTTGAAATATATTTTTATATCTAAAAGAGTGTATCTTCCTTCCTTATTCATTGTTAAGAATATTTCTGGCTGTACTTGCATGCTTATCCTTCCAAATTAATTTTGTTTACTTTTCACATTTATAGGAATCTATTATTTATTTATTATTATTTTTTTTGAGATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTTGGCTCATTGCAACCTCTGCCTCCCGGATTCAAGCAATTCTCCTGCCACAGCCTCCCAAGTAGCTGGGATTATAGGCACTCACCACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGAGTTTCACCATGCTGGCCAGGCTGGTCTCGAACTCCTGGCCTCGTGATCTGCCTGCCTCAGCCTCCCGAAGTGCTGTCATTACAGGCATGAGCCACTGTGCCCGGCCAGAAAGTTTTAGAGAAATGTTATGGGTATTGCATTGCATTTACATATTTAGCCTTCCCATTTAGTAGAAACTATTGCTTTGGGAAAAGTACATTAATCAGTTATTTTGTACATTATTTCATATCTTGTTTGATGTGAGCCCAATATGAGTTATAACTCCAATTTCTGAAACTATGCTGAATTAATCAATTTTTCAATCATAGCCAAAGCAGCCAATTAAATTCATTTAGTTTATAGATTAAGAAACTCTAAATGCTATTATTAGTAATAATAACCACATAATAAGAAAAACAAAAATGCTATAGTATATAAAAAGCCATAATTACATGGTGTGTTAAAAACACAAGACTGTAGTGAGACTGCTTGAATTCAAGCTTTACTTTGCTTACTAACCCTGCTAAGTTGCTAACAGTCTAGCATTGGGA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2780:HG4_10X_allpass_504:HG2_10X_allpass_434:HG3_10X_allpass_543:HG4_PB_assemblyticsfalcon_14652:HG3_PB_assemblyticsfalcon_14879:HG2_PB_assemblyticsfalcon_14902:HG2_PB_assemblyticsPBcR_14501:HG2_Ill_tnscope_302:HG4_PB_pbsv_2744:HG4_PB_SVrefine2PBcRDovetail_1453:HG4_PB_SVrefine2Falcon1Dovetail_1661:HG4_Ill_SVrefine2DISCOVARDovetail_2072:HG4_Ill_MetaSV_2871:HG4_Ill_GATKHCSBGrefine_1928:HG3_PB_SVrefine2PBcRDovetail_1368:HG3_PB_SVrefine2Falcon1Dovetail_1713:HG3_Ill_SVrefine2DISCOVARDovetail_2057:HG3_Ill_MetaSV_2922:HG2_PB_pbsv_2738:HG2_PB_SVrefine2PBcRplusDovetail_6171:HG2_PB_SVrefine2PB10Xhap12_2033:HG2_PB_SVrefine2Falcon2Bionano_1182:HG2_PB_SVrefine2Falcon1plusDovetail_6660:HG2_Ill_SpiralSDKrefine_9460:HG2_Ill_SVrefine2DISCOVARplusDovetail_7297:HG2_Ill_GATKHCSBGrefine_1840:HG2_10X_SVrefine210Xhap12_2101:HG4_Ill_Krunchall_4078:HG3_Ill_Krunchall_3919:HG2_Ill_breakscan11_374:HG2_Ill_Krunchall_3897:HG3_PB_pbsv_2723;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2101:HG2_Ill_GATKHCSBGrefine_1840:HG2_Ill_SVrefine2DISCOVARplusDovetail_7297:HG2_Ill_SpiralSDKrefine_9460:HG2_PB_SVrefine2Falcon1plusDovetail_6660:HG2_PB_SVrefine2Falcon2Bionano_1182:HG2_PB_SVrefine2PB10Xhap12_2033:HG2_PB_SVrefine2PBcRplusDovetail_6171:HG2_PB_pbsv_2738:HG3_Ill_MetaSV_2922:HG3_Ill_SVrefine2DISCOVARDovetail_2057:HG3_PB_SVrefine2Falcon1Dovetail_1713:HG3_PB_SVrefine2PBcRDovetail_1368:HG4_Ill_GATKHCSBGrefine_1928:HG4_Ill_MetaSV_2871:HG4_Ill_SVrefine2DISCOVARDovetail_2072:HG4_PB_SVrefine2Falcon1Dovetail_1661:HG4_PB_SVrefine2PBcRDovetail_1453:HG4_PB_pbsv_2744;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0330864;ClusterMaxSizeDiff=0.0330864;ClusterMaxEditDist=0.0330864;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3992;DistBack=6200;DistForward=-3991;DistMin=-3991;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:229264345-229268338;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:123:./.:0:0:0:0:1/1:0:26:0:21:1/1:0:39:1/1:2:332:3886:.:.
chr2	231401464	HG3_Ill_Krunchall_3942	CCTTCTTGCTTGGCAATACTCATTGTCTCAGTGATTGGCTTTCTGCGTGGCAAGCAG	C	20	PASS	ClusterIDs=HG2_PB_HySA_5361:HG3_PB_HySA_4357:HG3_PB_pbsv_2731:HG3_PB_assemblyticsfalcon_14896:HG3_Ill_svaba_3572:HG3_Ill_scalpel_2857:HG3_Ill_manta_633:HG3_Ill_Krunchall_3942:HG3_Ill_GATKHC_4735:HG3_Ill_GATKHCSBGrefine_1876:HG3_Ill_250bpfermikitraw_3780:HG3_Ill_150bpfermikitraw_3676:HG3_CG_vcfBeta_1581:HG2_PB_pbsv_2747:HG2_Ill_svaba_3463:HG2_Ill_scalpel_2738:HG2_Ill_manta_797:HG2_Ill_breakscan11_377:HG2_Ill_SpiralSDKrefine_9474:HG2_Ill_Krunchall_3919:HG2_Ill_GATKHC_4596:HG2_Ill_GATKHCSBGrefine_1846:HG2_Ill_250bpfermikitraw_3841:HG2_Ill_150bpfermikitraw_3579:HG2_CG_vcfBeta_1671:HG2_10X_allpass_437:HG3_PB_HySA_4356;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_437:HG2_CG_vcfBeta_1671:HG2_Ill_150bpfermikitraw_3579:HG2_Ill_250bpfermikitraw_3841:HG2_Ill_GATKHCSBGrefine_1846:HG2_Ill_GATKHC_4596:HG2_Ill_Krunchall_3919:HG2_Ill_SpiralSDKrefine_9474:HG2_Ill_breakscan11_377:HG2_Ill_manta_797:HG2_Ill_scalpel_2738:HG2_Ill_svaba_3463:HG2_PB_pbsv_2747:HG3_CG_vcfBeta_1581:HG3_Ill_150bpfermikitraw_3676:HG3_Ill_250bpfermikitraw_3780:HG3_Ill_GATKHCSBGrefine_1876:HG3_Ill_GATKHC_4735:HG3_Ill_Krunchall_3942:HG3_Ill_manta_633:HG3_Ill_scalpel_2857:HG3_Ill_svaba_3572:HG3_PB_assemblyticsfalcon_14896:HG3_PB_pbsv_2731;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0344828;PBcalls=6;Illcalls=18;TenXcalls=1;CGcalls=2;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=2;HG2count=14;HG3count=13;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-56;DistBack=12546;DistForward=9794;DistMin=9794;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=2:231401463-231401522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:35:0|1:26:1:0:32:0|1:28:0:0:15:0/1:33:27:./.:.:.:.:.:.
chr2	231996176	HG2_PB_SVrefine2PBcRplusDovetail_6182	TAGAAAGTTTTTTTGCCCTTGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_189:HG4_10X_allpass_507:HG2_PB_assemblyticsfalcon_14930:HG2_PB_assemblyticsPBcR_14529:HG4_PB_assemblyticsfalcon_14670:HG3_PB_assemblyticsfalcon_14903:HG4_Ill_Krunchall_4101:HG3_PB_pbsv_2736:HG3_Ill_Krunchall_3946:HG2_Ill_Krunchall_3923:HG3_Ill_Spiral_3033:HG2_PB_pbsv_2752:HG4_PB_pbsv_2757:HG3_Ill_MetaSV_2928:HG2_Ill_tnscope_304:HG2_Ill_MetaSV_2785:HG4_PB_SVrefine2Falcon1Dovetail_1669:HG4_Ill_manta_687:HG4_Ill_MetaSV_2877:HG4_Ill_GATKHCSBGrefine_1938:HG3_PB_SVrefine2Falcon1Dovetail_1718:HG3_Ill_manta_635:HG3_Ill_GATKHCSBGrefine_1880:HG3_10X_allpass_546:HG2_PB_SVrefine2PBcRplusDovetail_6182:HG2_PB_SVrefine2PB10Xhap12_2047:HG2_PB_SVrefine2Falcon2Bionano_1191:HG2_PB_SVrefine2Falcon1plusDovetail_6670:HG2_Ill_scalpel_2740:HG2_Ill_manta_799:HG2_Ill_SpiralSDKrefine_9479:HG2_Ill_SVrefine2DISCOVARplusDovetail_7305:HG2_Ill_GATKHCSBGrefine_1849:HG2_10X_allpass_438:HG2_10X_SVrefine210Xhap12_2110:HG2_Ill_breakscan11_378:HG4_Ill_Spiral_219;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2110:HG2_10X_allpass_438:HG2_Ill_GATKHCSBGrefine_1849:HG2_Ill_SVrefine2DISCOVARplusDovetail_7305:HG2_Ill_SpiralSDKrefine_9479:HG2_Ill_manta_799:HG2_Ill_scalpel_2740:HG2_PB_SVrefine2Falcon1plusDovetail_6670:HG2_PB_SVrefine2Falcon2Bionano_1191:HG2_PB_SVrefine2PB10Xhap12_2047:HG2_PB_SVrefine2PBcRplusDovetail_6182:HG3_10X_allpass_546:HG3_Ill_GATKHCSBGrefine_1880:HG3_Ill_manta_635:HG3_PB_SVrefine2Falcon1Dovetail_1718:HG4_Ill_GATKHCSBGrefine_1938:HG4_Ill_MetaSV_2877:HG4_Ill_manta_687:HG4_PB_SVrefine2Falcon1Dovetail_1669;NumExactMatchSVs=19;ClusterMaxShiftDist=0.117089;ClusterMaxSizeDiff=0.117089;ClusterMaxEditDist=0.117089;PBcalls=13;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=37296;DistForward=11400;DistMin=11400;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=2:231996177-231996519;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:70:1/1:1:15:1:12:1/1:0:13:0:17:1/1:0:60:0/1:2:9:.:.:.
chr2	232290895	HG3_10X_allpass_547	GGTTGGCGGTACTCTGCGAATTGTCATACATCACAGCAAGGAGGAGGTGATGCCACACCC	G	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_1851:HG3_PB_HySA_4365:HG4_PB_pbsv_2759:HG3_PB_pbsv_2738:HG2_PB_pbsv_2754:HG4_Ill_svaba_3555:HG4_Ill_scalpel_2660:HG4_Ill_Krunchall_4104:HG4_Ill_250bpfermikitraw_3865:HG4_Ill_150bpfermikitraw_3738:HG3_Ill_svaba_3577:HG3_Ill_scalpel_2860:HG3_Ill_Krunchall_3948:HG3_Ill_250bpfermikitraw_3786:HG3_Ill_150bpfermikitraw_3680:HG3_10X_allpass_547:HG2_Ill_svaba_3467:HG2_Ill_scalpel_2742:HG2_Ill_Krunchall_3925:HG2_Ill_250bpfermikitraw_3846:HG2_Ill_150bpfermikitraw_3583:HG2_PB_HySA_5367:HG2_Ill_SpiralSDKrefine_9482:HG4_Ill_manta_688:HG4_Ill_Cortex_2012:HG3_Ill_manta_636:HG3_Ill_Cortex_2053:HG2_Ill_manta_800:HG2_Ill_Cortex_4756:HG4_Ill_Spiral_220:HG3_Ill_Spiral_3035:HG2_Ill_Spiral_190:HG3_PB_assemblyticsfalcon_14905:HG4_PB_assemblyticsfalcon_14673:HG4_Ill_GATKHC_4680:HG4_Ill_GATKHCSBGrefine_1939:HG3_Ill_GATKHC_4743:HG3_Ill_GATKHCSBGrefine_1881:HG2_PB_assemblyticsfalcon_14934:HG2_PB_assemblyticsPBcR_14533:HG2_Ill_GATKHC_4604;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3583:HG2_Ill_250bpfermikitraw_3846:HG2_Ill_Krunchall_3925:HG2_Ill_scalpel_2742:HG2_Ill_svaba_3467:HG3_10X_allpass_547:HG3_Ill_150bpfermikitraw_3680:HG3_Ill_250bpfermikitraw_3786:HG3_Ill_Krunchall_3948:HG3_Ill_scalpel_2860:HG3_Ill_svaba_3577:HG4_Ill_150bpfermikitraw_3738:HG4_Ill_250bpfermikitraw_3865:HG4_Ill_Krunchall_4104:HG4_Ill_scalpel_2660:HG4_Ill_svaba_3555;NumExactMatchSVs=16;ClusterMaxShiftDist=0.159292;ClusterMaxSizeDiff=0.159292;ClusterMaxEditDist=0.218182;PBcalls=9;Illcalls=31;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-59;DistBack=6093;DistForward=15095;DistMin=6093;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=58;REFWIDENED=2:232290896-232291012;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:0:5:4:40:./.:1:5:0:9:1/1:0:43:./.:.:.:.:.:.
chr2	233332719	HG2_PB_assemblyticsfalcon_14946	ATACCTTTTATTTCTTTTTCTTGCCGAATTGCTCTGGCTAAGATTTCCAGTACCATGTGGAACAGAGCAGGCATCCTTGCCTTGTTCCTGATCTTAGAGGAGAAGCTTTCAACTTTTCACTGTTGAGTACGATGTTGGCTGTGGACTTGTCATACATGATCTTCACTGAGTTGAGGAACATTCCTTGCATACCTACTTTGTTGAGAGTGTCTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGAAAGCTCTGCCTCCTGGGTTCATGCCATTCTTCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCACCACCATGCCAGCTAATTTTTTTGTATTTTTGGTAGAGATGGGGTTTCATCGTGTTAGCCAGGAAGGTCTCAATCTCCTGACCTCGTGATCCACCCGCCTTGGCCTCTCAAAGTGTGTTGAGAGTTTTTTTTACCATGAAAGGATTGAACTATGTCAAATGCTTTTTCTGCATCTATTGAGATGAATATATGATTTCTTGTCCTTCATTCTAATATGGTGACTCACATTGATTGGCATATGTTGAACCAAACTTGCATCCCAGAGATAATCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCACAACATTGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTCTCAT	TGAAGCCTATTAGGTGAA	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1383:HG2_Ill_tnscope_305:HG2_Ill_SpiralSDKrefine_9488:HG4_PB_assemblyticsfalcon_14683:HG4_PB_SVrefine2PBcRDovetail_1468:HG4_PB_SVrefine2Falcon1Dovetail_1678:HG4_Ill_manta_690:HG4_Ill_SVrefine2DISCOVARDovetail_2096:HG3_PB_assemblyticsfalcon_14915:HG3_PB_SVrefine2Falcon1Dovetail_1726:HG3_Ill_manta_638:HG2_PB_assemblyticsfalcon_14946:HG2_PB_SVrefine2PBcRplusDovetail_6191:HG2_PB_SVrefine2PB10Xhap12_2055:HG2_PB_SVrefine2Falcon2Bionano_1199:HG2_PB_SVrefine2Falcon1plusDovetail_6678:HG2_Ill_manta_802:HG2_Ill_SVrefine2DISCOVARplusDovetail_7313:HG2_10X_SVrefine210Xhap12_2118:HG4_Ill_Spiral_221:HG3_Ill_Spiral_3043:HG2_Ill_Spiral_191:HG3_Ill_MetaSV_2932:HG2_PB_assemblyticsPBcR_14544:HG3_10X_allpass_549:HG2_10X_allpass_440:HG3_PB_pbsv_2752:HG2_Ill_MetaSV_2790:HG4_PB_pbsv_2773:HG4_Ill_Krunchall_4113:HG3_Ill_Krunchall_3952:HG2_Ill_Krunchall_3930:HG2_PB_pbsv_2764:HG4_10X_allpass_512;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2118:HG2_Ill_SVrefine2DISCOVARplusDovetail_7313:HG2_Ill_manta_802:HG2_PB_SVrefine2Falcon1plusDovetail_6678:HG2_PB_SVrefine2Falcon2Bionano_1199:HG2_PB_SVrefine2PB10Xhap12_2055:HG2_PB_SVrefine2PBcRplusDovetail_6191:HG2_PB_assemblyticsfalcon_14946:HG3_Ill_manta_638:HG3_PB_SVrefine2Falcon1Dovetail_1726:HG3_PB_assemblyticsfalcon_14915:HG4_Ill_SVrefine2DISCOVARDovetail_2096:HG4_Ill_manta_690:HG4_PB_SVrefine2Falcon1Dovetail_1678:HG4_PB_SVrefine2PBcRDovetail_1468:HG4_PB_assemblyticsfalcon_14683;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0638792;ClusterMaxSizeDiff=0.0638792;ClusterMaxEditDist=0.0638792;PBcalls=15;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-744;DistBack=-546;DistForward=-430;DistMin=-546;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=2:233332719-233333480;PctSeqSimilarity=0.9407;PctSizeSimilarity=0.996;PctRecOverlap=0.9803;SizeDiff=-3;StartDistance=1;EndDistance=15;GTMatch=0;TruScore=97;MatchId=2145.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:89:1/1:1:20:0:15:./.:1:20:0:21:1/1:0:60:1/1:2:34:.:.:.
chr2	233364546	HG4_10X_allpass_513	CCTAGGGTGGTTGGAGTGGGCAGCCATATCCCCAGACACGAGCCATCTGATGGGGGTGCTGAGGTGGGAAATGGGGGCCCGGGGGACTGCAGAGTAAGAATTGGGGGTCCCTACTACCCATCTGATGGGGGTGCTGGGGTGGGAAATGGGGGCCCGGGGGACTGCAGAGTAAGAATTGGGGGCCCTGAGGCCCA	C	20	PASS	ClusterIDs=HG4_Ill_MetaSV_2883:HG3_PB_assemblyticsfalcon_14916:HG2_Ill_Krunchall_3931:HG4_PB_pbsv_2774:HG4_Ill_svaba_3560:HG4_Ill_GATKHCSBGrefine_1948:HG4_10X_allpass_513:HG3_PB_SVrefine2Falcon1Dovetail_1727:HG2_PB_pbsv_2765:HG2_PB_assemblyticsfalcon_14947:HG2_PB_SVrefine2Falcon1plusDovetail_6679:HG2_Ill_svaba_3470:HG2_Ill_manta_803:HG2_Ill_SpiralSDKrefine_9489:HG2_Ill_SVrefine2DISCOVARplusDovetail_7314:HG2_Ill_MetaSV_2791:HG2_Ill_GATKHCSBGrefine_1858:HG2_10X_SVrefine210Xhap12_2119;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2119:HG2_Ill_GATKHCSBGrefine_1858:HG2_Ill_MetaSV_2791:HG2_Ill_SVrefine2DISCOVARplusDovetail_7314:HG2_Ill_SpiralSDKrefine_9489:HG2_Ill_manta_803:HG2_Ill_svaba_3470:HG2_PB_SVrefine2Falcon1plusDovetail_6679:HG2_PB_assemblyticsfalcon_14947:HG2_PB_pbsv_2765:HG3_PB_SVrefine2Falcon1Dovetail_1727:HG4_10X_allpass_513:HG4_Ill_GATKHCSBGrefine_1948:HG4_Ill_svaba_3560:HG4_PB_pbsv_2774;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0155039;ClusterMaxSizeDiff=0.0155039;ClusterMaxEditDist=0.0155039;PBcalls=6;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-193;DistBack=31065;DistForward=-183;DistMin=-183;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=2:233364547-233364741;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:24:./.:23:9:10:10:0|1:41:0:0:15:0/1:29:28:./.:.:.:.:.:.
chr2	233668371	HG2_PB_SVrefine2Falcon1plusDovetail_6680	TCTATTTCTGCTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCCGCCTCCCAAAGTGCTGGGATTACAGGC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_192:HG3_PB_assemblyticsfalcon_14920:HG2_PB_assemblyticsfalcon_14950:HG4_PB_assemblyticsfalcon_14687:HG2_PB_assemblyticsPBcR_14547:HG4_Ill_Krunchall_4117:HG2_Ill_Krunchall_3937:HG4_PB_pbsv_2775:HG2_PB_pbsv_2767:HG2_PB_HySA_5377:HG2_Ill_tnscope_306:HG4_PB_SVrefine2PBcRDovetail_1471:HG4_PB_SVrefine2Falcon1Dovetail_1680:HG4_Ill_SVrefine2DISCOVARDovetail_2098:HG4_Ill_GATKHCSBGrefine_1949:HG4_10X_allpass_514:HG3_PB_pbsv_2754:HG3_PB_SVrefine2Falcon1Dovetail_1729:HG3_PB_HySA_4376:HG3_Ill_scalpel_2864:HG3_Ill_manta_639:HG3_Ill_MetaSV_2933:HG3_Ill_GATKHCSBGrefine_1888:HG3_10X_allpass_550:HG2_PB_SVrefine2PBcRplusDovetail_6192:HG2_PB_SVrefine2PB10Xhap12_2057:HG2_PB_SVrefine2Falcon2Bionano_1200:HG2_PB_SVrefine2Falcon1plusDovetail_6680:HG2_Ill_scalpel_2751:HG2_Ill_manta_804:HG2_Ill_SpiralSDKrefine_9494:HG2_Ill_SVrefine2DISCOVARplusDovetail_7316:HG2_Ill_MetaSV_2792:HG2_Ill_GATKHCSBGrefine_1859:HG2_10X_allpass_441:HG2_10X_SVrefine210Xhap12_2120:HG2_Ill_breakscan11_379:HG4_Ill_Spiral_222:HG3_Ill_Spiral_3048;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2120:HG2_10X_allpass_441:HG2_Ill_GATKHCSBGrefine_1859:HG2_Ill_MetaSV_2792:HG2_Ill_SVrefine2DISCOVARplusDovetail_7316:HG2_Ill_SpiralSDKrefine_9494:HG2_Ill_manta_804:HG2_Ill_scalpel_2751:HG2_PB_SVrefine2Falcon1plusDovetail_6680:HG2_PB_SVrefine2Falcon2Bionano_1200:HG2_PB_SVrefine2PB10Xhap12_2057:HG2_PB_SVrefine2PBcRplusDovetail_6192:HG3_10X_allpass_550:HG3_Ill_GATKHCSBGrefine_1888:HG3_Ill_MetaSV_2933:HG3_Ill_manta_639:HG3_Ill_scalpel_2864:HG3_PB_HySA_4376:HG3_PB_SVrefine2Falcon1Dovetail_1729:HG3_PB_pbsv_2754:HG4_10X_allpass_514:HG4_Ill_GATKHCSBGrefine_1949:HG4_Ill_SVrefine2DISCOVARDovetail_2098:HG4_PB_SVrefine2Falcon1Dovetail_1680:HG4_PB_SVrefine2PBcRDovetail_1471;NumExactMatchSVs=25;ClusterMaxShiftDist=0.09699;ClusterMaxSizeDiff=0.09699;ClusterMaxEditDist=0.09699;PBcalls=16;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-305;DistBack=-368;DistForward=-287;DistMin=-368;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:233668372-233668691;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:61:1/1:3:26:0:22:1/1:0:16:0:42:1/1:0:52:0/1:2:11:.:.:.
chr2	233930297	HG2_Ill_150bpfermikitraw_3598	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_2777:HG2_Ill_Krunchall_3945:HG4_Ill_GATKHC_4707:HG4_Ill_GATKHCSBGrefine_1952:HG3_Ill_GATKHC_4771:HG3_Ill_GATKHCSBGrefine_1892:HG2_Ill_GATKHC_4637:HG2_Ill_GATKHCSBGrefine_1867:HG4_PB_HySA_4243:HG2_PB_HySA_5392:HG4_Ill_manta_691:HG4_Ill_Krunchall_4126:HG4_Ill_250bpfermikitraw_3884:HG4_Ill_150bpfermikitraw_3753:HG4_10X_allpass_515:HG3_Ill_Krunchall_3963:HG3_Ill_250bpfermikitraw_3803:HG3_Ill_150bpfermikitraw_3697:HG3_10X_allpass_551:HG2_Ill_manta_808:HG2_Ill_Krunchall_3944:HG2_Ill_250bpfermikitraw_3862:HG2_Ill_150bpfermikitraw_3598:HG2_10X_allpass_442:HG4_Ill_svaba_3573:HG3_Ill_svaba_3596:HG2_Ill_svaba_3485:HG3_PB_HySA_4386:HG3_PB_pbsv_2762:HG4_PB_pbsv_2781:HG4_Ill_svaba_3572:HG3_Ill_svaba_3595:HG2_PB_assemblyticsfalcon_14955:HG2_Ill_svaba_3484:HG4_PB_assemblyticsfalcon_14695:HG3_PB_assemblyticsfalcon_14928:HG2_PB_assemblyticsPBcR_14553;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_442:HG2_Ill_150bpfermikitraw_3598:HG2_Ill_250bpfermikitraw_3862:HG2_Ill_Krunchall_3944:HG2_Ill_manta_808:HG3_10X_allpass_551:HG3_Ill_150bpfermikitraw_3697:HG3_Ill_250bpfermikitraw_3803:HG3_Ill_Krunchall_3963:HG4_10X_allpass_515:HG4_Ill_150bpfermikitraw_3753:HG4_Ill_250bpfermikitraw_3884:HG4_Ill_Krunchall_4126:HG4_Ill_manta_691;NumExactMatchSVs=14;ClusterMaxShiftDist=0.09375;ClusterMaxSizeDiff=0.09375;ClusterMaxEditDist=0.0952381;PBcalls=10;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-65;DistBack=9633;DistForward=12024;DistMin=9633;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=35;REFWIDENED=2:233930274-233930373;PctSeqSimilarity=0.9866;PctSizeSimilarity=0.9846;PctRecOverlap=0.6212;SizeDiff=1;StartDistance=24;EndDistance=25;GTMatch=0;TruScore=86;MatchId=2148.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:1:20:1:15:./.:1:13:0:7:1/1:0:14:./.:.:.:.:.:.
chr2	235807740	HG4_Ill_250bpfermikitraw_3910	GTCTGCCATTAACAAGAGTTCCTTCAGTCTCAACCACAAGCCAATGTCTTC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3625:HG4_PB_assemblyticsfalcon_14712:HG3_PB_assemblyticsfalcon_14949:HG4_PB_HySA_4278:HG4_Ill_Spiral_223:HG2_Ill_Spiral_193:HG4_Ill_Krunchall_4151:HG4_Ill_250bpfermikitraw_3910:HG4_Ill_150bpfermikitraw_3776:HG2_Ill_Krunchall_3968:HG2_Ill_250bpfermikitraw_3883;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3625:HG4_Ill_Krunchall_4151:HG4_Ill_250bpfermikitraw_3910:HG4_Ill_150bpfermikitraw_3776:HG2_Ill_Krunchall_3968:HG2_Ill_250bpfermikitraw_3883;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.0980392;PBcalls=3;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=-1;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=106;REFWIDENED=2:235807741-235807896;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:19:./.:28:5:10:13:0|1:17:1:0:6:0/1:16:14:./.:.:.:.:.:.
chr2	235946882	HG4_Ill_scalpel_2701	TTATATATATATTATATATAATATATATTATATATAATATATATTATATATAATATATATATTATATATATATATTATATATTATATATATATTATATATAGTATATATATTTTATATATATATATATAATATATATACATATATATATATATATATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2134:HG2_PB_HySA_5436:HG4_Ill_Krunchall_4155:HG3_Ill_Krunchall_3982:HG2_Ill_Krunchall_3977:HG4_PB_pbsv_2798:HG3_PB_SVrefine2PBcRDovetail_1398:HG4_Ill_svaba_3601:HG4_Ill_scalpel_2701:HG4_Ill_GATKHC_4740:HG4_Ill_GATKHCSBGrefine_1965:HG3_Ill_svaba_3616:HG3_Ill_scalpel_2897:HG3_Ill_manta_643:HG3_10X_allpass_553:HG2_PB_SVrefine2Falcon2Bionano_1214:HG2_Ill_svaba_3515:HG2_Ill_manta_810:HG2_Ill_SpiralSDKrefine_9515:HG2_Ill_GATKHCSBGrefine_1878:HG2_Ill_250bpfermikitraw_3891:HG2_Ill_150bpfermikitraw_3630:HG2_10X_allpass_445:HG4_PB_SVrefine2PBcRDovetail_1484:HG2_Ill_MetaSV_2796:HG2_PB_pbsv_2794:HG3_PB_pbsv_2779:HG4_PB_SVrefine2Falcon1Dovetail_1697:HG3_Ill_SVrefine2DISCOVARDovetail_2092:HG2_PB_SVrefine2PBcRplusDovetail_6207:HG2_PB_SVrefine2PB10Xhap12_2073:HG2_PB_SVrefine2Falcon1plusDovetail_6698:HG2_Ill_SVrefine2DISCOVARplusDovetail_7329;NumClusterSVs=33;ExactMatchIDs=HG2_10X_allpass_445:HG2_Ill_150bpfermikitraw_3630:HG2_Ill_250bpfermikitraw_3891:HG2_Ill_GATKHCSBGrefine_1878:HG2_Ill_SpiralSDKrefine_9515:HG2_Ill_manta_810:HG2_Ill_svaba_3515:HG2_PB_SVrefine2Falcon2Bionano_1214:HG3_10X_allpass_553:HG3_Ill_manta_643:HG3_Ill_scalpel_2897:HG3_Ill_svaba_3616:HG4_Ill_GATKHCSBGrefine_1965:HG4_Ill_GATKHC_4740:HG4_Ill_scalpel_2701:HG4_Ill_svaba_3601;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0319489;ClusterMaxSizeDiff=0.0319489;ClusterMaxEditDist=0.0828025;PBcalls=11;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-157;DistBack=1497;DistForward=-155;DistMin=-155;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=70;REFWIDENED=2:235946833-235947059;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:84:1/1:1:28:0:22:./.:1:17:1:10:1/1:0:56:./.:.:.:.:.:.
chr2	235951923	HG4_PB_SVrefine2PBcRDovetail_1485	GGGTGCTGCTCAGCAAAGCCTTTCCGCCTTCCCAGTGCACATGGGCGTGGGCCGTGGTGTCGTAAGTCACCAGGACAGTGTCTGTGGCTGATGTCCCGCTGCCTGAGATA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6699:HG3_PB_HySA_4410:HG3_PB_pbsv_2780:HG4_PB_pbsv_2800:HG2_PB_pbsv_2795:HG4_PB_HySA_4286:HG4_PB_SVrefine2PBcRDovetail_1485:HG4_PB_SVrefine2Falcon1Dovetail_1698:HG3_PB_SVrefine2PBcRDovetail_1399:HG3_PB_SVrefine2Falcon1Dovetail_1749:HG2_PB_SVrefine2PBcRplusDovetail_6208:HG2_PB_SVrefine2PB10Xhap12_2074:HG2_PB_SVrefine2Falcon2Bionano_1215;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6699:HG4_PB_SVrefine2PBcRDovetail_1485:HG4_PB_SVrefine2Falcon1Dovetail_1698:HG3_PB_SVrefine2PBcRDovetail_1399:HG3_PB_SVrefine2Falcon1Dovetail_1749:HG2_PB_SVrefine2PBcRplusDovetail_6208:HG2_PB_SVrefine2PB10Xhap12_2074:HG2_PB_SVrefine2Falcon2Bionano_1215;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.12093;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-109;DistBack=4987;DistForward=-110;DistMin=-110;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=432;REFWIDENED=2:235951924-235952464;PctSeqSimilarity=0.9256;PctSizeSimilarity=0.9908;PctRecOverlap=0.4545;SizeDiff=1;StartDistance=-60;EndDistance=-59;GTMatch=0;TruScore=79;MatchId=2152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:11:47:1/1:6:21:1:9:0/0:11:0:9:0:0/0:31:0:./.:.:.:.:.:.
chr2	236094668	HG4_Ill_SVrefine2DISCOVARDovetail_2118	CAAAAACCACATGATTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1700:HG4_10X_allpass_517:HG4_PB_pbsv_2802:HG3_Ill_Krunchall_3985:HG2_PB_pbsv_2797:HG2_Ill_Krunchall_3979:HG2_PB_assemblyticsfalcon_14981:HG3_PB_assemblyticsfalcon_14955:HG3_PB_SVrefine2Falcon1Dovetail_1751:HG2_Ill_breakscan11_384:HG2_PB_HySA_5438:HG4_Ill_MetaSV_2889:HG3_Ill_MetaSV_2937:HG2_Ill_tnscope_307:HG4_PB_SVrefine2PBcRDovetail_1487:HG4_Ill_manta_695:HG4_Ill_SVrefine2DISCOVARDovetail_2118:HG4_Ill_GATKHCSBGrefine_1968:HG3_PB_SVrefine2PBcRDovetail_1401:HG3_Ill_SVrefine2DISCOVARDovetail_2094:HG3_Ill_GATKHCSBGrefine_1900:HG2_PB_SVrefine2PBcRplusDovetail_6210:HG2_PB_SVrefine2PB10Xhap12_2076:HG2_PB_SVrefine2Falcon1plusDovetail_6701:HG2_Ill_manta_811:HG2_Ill_MetaSV_2798:HG2_Ill_GATKHCSBGrefine_1880:HG2_10X_SVrefine210Xhap12_2135:HG3_PB_pbsv_2782:HG4_PB_assemblyticsfalcon_14718;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2135:HG2_Ill_GATKHCSBGrefine_1880:HG2_Ill_MetaSV_2798:HG2_Ill_manta_811:HG2_PB_SVrefine2Falcon1plusDovetail_6701:HG2_PB_SVrefine2PB10Xhap12_2076:HG2_PB_SVrefine2PBcRplusDovetail_6210:HG3_Ill_GATKHCSBGrefine_1900:HG3_Ill_SVrefine2DISCOVARDovetail_2094:HG3_PB_SVrefine2PBcRDovetail_1401:HG4_Ill_GATKHCSBGrefine_1968:HG4_Ill_SVrefine2DISCOVARDovetail_2118:HG4_Ill_manta_695:HG4_PB_SVrefine2PBcRDovetail_1487;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0896445;ClusterMaxSizeDiff=0.0896445;ClusterMaxEditDist=0.202492;PBcalls=14;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=16695;DistForward=-314;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:236094669-236095012;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:53:1|0:2:43:22:6:0|1:48:0:0:10:0/1:31:18:0/1:23:7:.:.:.
chr2	236616283	HG3_Ill_GATKHCSBGrefine_1901	ATGTGACATGATGGGTTGTGCTCCCCCGGCGTGTGACTTGGTGGGACGTGCTCCCCAGCC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_2808:HG3_PB_pbsv_2788:HG4_PB_assemblyticsfalcon_14730:HG4_Ill_svaba_3609:HG4_Ill_scalpel_2704:HG4_Ill_GATKHC_4752:HG4_Ill_GATKHCSBGrefine_1969:HG3_PB_assemblyticsfalcon_14969:HG3_Ill_scalpel_2902:HG3_Ill_GATKHC_4807:HG3_Ill_GATKHCSBGrefine_1901:HG3_Ill_150bpfermikitraw_3728:HG2_PB_assemblyticsfalcon_14990:HG2_PB_assemblyticsPBcR_14589:HG2_Ill_scalpel_2781:HG2_Ill_Krunchall_3982:HG2_Ill_GATKHC_4677:HG2_Ill_GATKHCSBGrefine_1881:HG2_PB_pbsv_2802;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1881:HG2_Ill_GATKHC_4677:HG2_Ill_Krunchall_3982:HG2_Ill_scalpel_2781:HG2_PB_assemblyticsPBcR_14589:HG2_PB_assemblyticsfalcon_14990:HG3_Ill_150bpfermikitraw_3728:HG3_Ill_GATKHCSBGrefine_1901:HG3_Ill_GATKHC_4807:HG3_Ill_scalpel_2902:HG3_PB_assemblyticsfalcon_14969:HG4_Ill_GATKHCSBGrefine_1969:HG4_Ill_GATKHC_4752:HG4_Ill_scalpel_2704:HG4_Ill_svaba_3609;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.0854701;PBcalls=7;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=31;DistForward=27166;DistMin=31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=2:236616282-236616352;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:31:0|1:30:4:3:25:./.:0:3:8:0:./.:1:2:./.:.:.:.:.:.
chr2	237701915	HG3_Ill_svaba_3628	GCAGCTCCAGGTCGTGAGCCCAGACAGGGCCTCAGCTCCAGGTCGTGAGCCCAGACAGGGCCT	G	20	PASS	ClusterIDs=HG3_Ill_Spiral_3086:HG4_PB_HySA_4311:HG3_PB_HySA_4429:HG4_PB_pbsv_2818:HG2_Ill_breakscan11_388:HG3_PB_pbsv_2794:HG2_PB_pbsv_2812:HG4_PB_SVrefine2PBcRDovetail_1494:HG4_PB_SVrefine2Falcon1Dovetail_1710:HG4_Ill_svaba_3621:HG4_Ill_scalpel_2713:HG4_Ill_manta_698:HG4_Ill_Krunchall_4175:HG4_Ill_GATKHC_4762:HG4_Ill_GATKHCSBGrefine_1974:HG4_Ill_250bpfermikitraw_3933:HG4_Ill_150bpfermikitraw_3796:HG3_PB_SVrefine2PBcRDovetail_1406:HG3_PB_SVrefine2Falcon1Dovetail_1761:HG3_Ill_svaba_3628:HG3_Ill_scalpel_2907:HG3_Ill_manta_644:HG3_Ill_SVrefine2DISCOVARDovetail_2104:HG3_Ill_Krunchall_3995:HG3_Ill_GATKHC_4815:HG3_Ill_GATKHCSBGrefine_1906:HG3_Ill_250bpfermikitraw_3838:HG3_Ill_150bpfermikitraw_3733:HG2_PB_assemblyticsfalcon_14996:HG2_Ill_svaba_3532:HG2_Ill_scalpel_2791:HG2_Ill_manta_812:HG2_Ill_SpiralSDKrefine_9532:HG2_Ill_Krunchall_3993:HG2_Ill_GATKHC_4693:HG2_Ill_GATKHCSBGrefine_1886:HG2_Ill_250bpfermikitraw_3907:HG2_Ill_150bpfermikitraw_3645:HG2_10X_SVrefine210Xhap12_2143;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2143:HG2_Ill_150bpfermikitraw_3645:HG2_Ill_250bpfermikitraw_3907:HG2_Ill_GATKHCSBGrefine_1886:HG2_Ill_GATKHC_4693:HG2_Ill_Krunchall_3993:HG2_Ill_SpiralSDKrefine_9532:HG2_Ill_manta_812:HG2_Ill_scalpel_2791:HG2_Ill_svaba_3532:HG2_PB_assemblyticsfalcon_14996:HG3_Ill_150bpfermikitraw_3733:HG3_Ill_250bpfermikitraw_3838:HG3_Ill_GATKHCSBGrefine_1906:HG3_Ill_GATKHC_4815:HG3_Ill_Krunchall_3995:HG3_Ill_SVrefine2DISCOVARDovetail_2104:HG3_Ill_manta_644:HG3_Ill_scalpel_2907:HG3_Ill_svaba_3628:HG3_PB_SVrefine2Falcon1Dovetail_1761:HG3_PB_SVrefine2PBcRDovetail_1406:HG4_Ill_150bpfermikitraw_3796:HG4_Ill_250bpfermikitraw_3933:HG4_Ill_GATKHCSBGrefine_1974:HG4_Ill_GATKHC_4762:HG4_Ill_Krunchall_4175:HG4_Ill_manta_698:HG4_Ill_scalpel_2713:HG4_Ill_svaba_3621:HG4_PB_SVrefine2Falcon1Dovetail_1710:HG4_PB_SVrefine2PBcRDovetail_1494;NumExactMatchSVs=32;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.0322581;PBcalls=10;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=43231;DistForward=-32;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=32;REFWIDENED=2:237701916-237702009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:27:0|1:29:4:2:21:1|0:0:24:27:0:0/1:24:22:./.:.:.:.:.:.
chr2	238120430	HG2_Ill_150bpfermikitraw_3653	TGTGTAAGGTATGGGTGGTGTGTGTGATGTGTGTGTAATATGTATGTGGCTTGC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3653:HG4_PB_assemblyticsfalcon_14748:HG4_PB_pbsv_2823:HG2_PB_pbsv_2817:HG4_Ill_svaba_3633:HG4_Ill_scalpel_2724:HG4_Ill_Krunchall_4187:HG4_Ill_GATKHC_4776:HG4_Ill_GATKHCSBGrefine_1978:HG4_Ill_250bpfermikitraw_3946:HG4_Ill_150bpfermikitraw_3805:HG2_Ill_svaba_3543:HG2_Ill_manta_815:HG2_Ill_SpiralSDKrefine_9540:HG2_Ill_Krunchall_4006:HG2_Ill_GATKHCSBGrefine_1892:HG2_Ill_250bpfermikitraw_3919;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3653:HG4_Ill_svaba_3633:HG4_Ill_scalpel_2724:HG4_Ill_Krunchall_4187:HG4_Ill_GATKHC_4776:HG4_Ill_GATKHCSBGrefine_1978:HG4_Ill_250bpfermikitraw_3946:HG4_Ill_150bpfermikitraw_3805:HG2_Ill_svaba_3543:HG2_Ill_manta_815:HG2_Ill_SpiralSDKrefine_9540:HG2_Ill_Krunchall_4006:HG2_Ill_GATKHCSBGrefine_1892:HG2_Ill_250bpfermikitraw_3919;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.145455;PBcalls=3;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-53;DistBack=5661;DistForward=48459;DistMin=5661;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=40;REFWIDENED=2:238120429-238120524;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:16:0|1:30:5:2:10:./.:227:47:34:95:0/1:19:8:./.:.:.:.:.:.
chr2	238430590	HG2_PB_pbsv_2820	GGGGTTGGGCCTTCAAACACCTGCTACAACTATAGTGCTGGAGTGGAGCTGGGCTGAGACT	G	10	PASS	ClusterIDs=HG2_PB_pbsv_2820:HG2_PB_assemblyticsfalcon_15006:HG2_PB_assemblyticsPBcR_14611:HG4_PB_pbsv_2824;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_2820:HG4_PB_pbsv_2824;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0495868;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.133333;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-60;DistBack=-60;DistForward=9302;DistMin=-60;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=915;REFWIDENED=2:238430360-238431334;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9836;PctRecOverlap=0.8065;SizeDiff=-1;StartDistance=12;EndDistance=11;GTMatch=0;TruScore=92;MatchId=2157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:31:1|0:5:24:29:1:./.:0:0:0:0:0/0:10:0:./.:.:.:.:.:.
chr2	239409371	HG2_Ill_breakscan11_392	TGAAAGAGCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCGCGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_3095:HG2_PB_HySA_5483:HG3_Ill_Krunchall_4008:HG2_Ill_Krunchall_4014:HG3_PB_pbsv_2815:HG2_PB_assemblyticsfalcon_15019:HG4_PB_HySA_4336:HG3_Ill_MetaSV_2945:HG2_Ill_tnscope_308:HG2_Ill_MetaSV_2807:HG4_PB_pbsv_2840:HG4_PB_SVrefine2Falcon1Dovetail_1723:HG4_Ill_svaba_3642:HG4_Ill_SVrefine2DISCOVARDovetail_2142:HG4_Ill_GATKHCSBGrefine_1988:HG4_10X_allpass_522:HG3_PB_SVrefine2PBcRDovetail_1414:HG3_PB_HySA_4451:HG3_Ill_svaba_3644:HG3_Ill_SVrefine2DISCOVARDovetail_2119:HG3_Ill_GATKHCSBGrefine_1914:HG2_PB_pbsv_2831:HG2_PB_SVrefine2PBcRplusDovetail_6224:HG2_PB_SVrefine2PB10Xhap12_2094:HG2_PB_SVrefine2Falcon2Bionano_1230:HG2_PB_SVrefine2Falcon1plusDovetail_6718:HG2_Ill_svaba_3552:HG2_Ill_manta_820:HG2_Ill_breakscan11_392:HG2_Ill_SVrefine2DISCOVARplusDovetail_7350:HG2_Ill_GATKHCSBGrefine_1897:HG2_10X_allpass_448:HG2_10X_SVrefine210Xhap12_2154:HG4_Ill_Spiral_225;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2154:HG2_10X_allpass_448:HG2_Ill_GATKHCSBGrefine_1897:HG2_Ill_SVrefine2DISCOVARplusDovetail_7350:HG2_Ill_breakscan11_392:HG2_Ill_manta_820:HG2_Ill_svaba_3552:HG2_PB_SVrefine2Falcon1plusDovetail_6718:HG2_PB_SVrefine2Falcon2Bionano_1230:HG2_PB_SVrefine2PB10Xhap12_2094:HG2_PB_SVrefine2PBcRplusDovetail_6224:HG2_PB_pbsv_2831:HG3_Ill_GATKHCSBGrefine_1914:HG3_Ill_SVrefine2DISCOVARDovetail_2119:HG3_Ill_svaba_3644:HG3_PB_HySA_4451:HG3_PB_SVrefine2PBcRDovetail_1414:HG4_10X_allpass_522:HG4_Ill_GATKHCSBGrefine_1988:HG4_Ill_SVrefine2DISCOVARDovetail_2142:HG4_Ill_svaba_3642:HG4_PB_SVrefine2Falcon1Dovetail_1723:HG4_PB_pbsv_2840;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.0588235;PBcalls=13;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=14142;DistForward=-327;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=2:239409372-239409707;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2159.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:75:1/1:2:25:0:28:./.:0:0:0:7:1/1:0:43:./.:2:5:.:.:.
chr2	239902389	HG2_Ill_SVrefine2DISCOVARplusDovetail_7352	AGCATTTTATTTTATTTTTTTTTTTATTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATACTATCCCTCCCCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2162:HG3_PB_SVrefine2PBcRDovetail_1420:HG4_PB_assemblyticsfalcon_14773:HG4_PB_SVrefine2Falcon1Dovetail_1730:HG3_PB_assemblyticsfalcon_15013:HG3_PB_SVrefine2Falcon1Dovetail_1779:HG3_PB_HySA_4463:HG2_PB_HySA_5502:HG3_Ill_MetaSV_2949:HG3_PB_pbsv_2825:HG3_Ill_svaba_3660:HG3_Ill_manta_649:HG3_Ill_SVrefine2DISCOVARDovetail_2120:HG3_Ill_GATKHCSBGrefine_1919:HG2_PB_pbsv_2839:HG2_PB_SVrefine2Falcon2Bionano_1235:HG2_Ill_svaba_3562:HG2_Ill_SVrefine2DISCOVARplusDovetail_7352:HG2_Ill_MetaSV_2809:HG2_Ill_GATKHCSBGrefine_1901;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2162:HG3_PB_pbsv_2825:HG3_Ill_svaba_3660:HG3_Ill_manta_649:HG3_Ill_SVrefine2DISCOVARDovetail_2120:HG3_Ill_GATKHCSBGrefine_1919:HG2_PB_pbsv_2839:HG2_PB_SVrefine2Falcon2Bionano_1235:HG2_Ill_svaba_3562:HG2_Ill_SVrefine2DISCOVARplusDovetail_7352:HG2_Ill_MetaSV_2809:HG2_Ill_GATKHCSBGrefine_1901;NumExactMatchSVs=12;ClusterMaxShiftDist=0.101333;ClusterMaxSizeDiff=0.101333;ClusterMaxEditDist=0.101604;PBcalls=10;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-172;DistBack=14334;DistForward=-137;DistMin=-137;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=2:239902390-239902569;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:29:./.:24:15:6:10:1|0:0:6:26:0:0/1:28:15:./.:.:.:.:.:.
chr2	240041607	HG3_Ill_250bpfermikitraw_3862	CGGCAGTGGGGACCACCCGTGGACAGGAGAGTGAGCAGGAGGCACCAGGACTCCTGGCCAAGTGCCAGAGAA	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_3938:HG4_Ill_Spiral_226:HG3_Ill_Spiral_3107:HG2_Ill_Spiral_195:HG2_PB_pbsv_2841:HG3_PB_pbsv_2827:HG4_PB_pbsv_2849:HG3_PB_HySA_4465:HG4_PB_assemblyticsfalcon_14775:HG4_Ill_svaba_3658:HG4_Ill_scalpel_2742:HG4_Ill_manta_704:HG4_Ill_Krunchall_4211:HG4_Ill_250bpfermikitraw_3970:HG3_PB_SVrefine2PBcRDovetail_1421:HG3_PB_SVrefine2Falcon1Dovetail_1780:HG3_Ill_svaba_3662:HG3_Ill_scalpel_2925:HG3_Ill_SVrefine2DISCOVARDovetail_2122:HG3_Ill_Krunchall_4018:HG3_Ill_GATKHCSBGrefine_1921:HG3_Ill_250bpfermikitraw_3862:HG3_Ill_150bpfermikitraw_3752:HG3_10X_allpass_560:HG2_PB_SVrefine2PBcRplusDovetail_6231:HG2_PB_SVrefine2PB10Xhap12_2101:HG2_PB_SVrefine2Falcon2Bionano_1236:HG2_PB_SVrefine2Falcon1plusDovetail_6724:HG2_Ill_svaba_3565:HG2_Ill_SpiralSDKrefine_9557;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3938:HG4_PB_assemblyticsfalcon_14775:HG4_Ill_svaba_3658:HG4_Ill_scalpel_2742:HG4_Ill_manta_704:HG4_Ill_Krunchall_4211:HG4_Ill_250bpfermikitraw_3970:HG3_PB_SVrefine2PBcRDovetail_1421:HG3_PB_SVrefine2Falcon1Dovetail_1780:HG3_Ill_svaba_3662:HG3_Ill_scalpel_2925:HG3_Ill_SVrefine2DISCOVARDovetail_2122:HG3_Ill_Krunchall_4018:HG3_Ill_GATKHCSBGrefine_1921:HG3_Ill_250bpfermikitraw_3862:HG3_Ill_150bpfermikitraw_3752:HG3_10X_allpass_560:HG2_PB_SVrefine2PBcRplusDovetail_6231:HG2_PB_SVrefine2PB10Xhap12_2101:HG2_PB_SVrefine2Falcon2Bionano_1236:HG2_PB_SVrefine2Falcon1plusDovetail_6724:HG2_Ill_svaba_3565:HG2_Ill_SpiralSDKrefine_9557;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0277778;ClusterMaxSizeDiff=0.0277778;ClusterMaxEditDist=0.028169;PBcalls=11;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-71;DistBack=0;DistForward=2;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=73;REFWIDENED=2:240041608-240041751;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:28:0|1:27:1:2:25:1|0:0:9:25:1:0/1:22:19:./.:.:.:.:.:.
chr2	240097969	HG3_10X_allpass_561	TCCCTCCCTCTGCCCGGCCTCCCTCCCTCTGCCCGGCCTTCTGCGCCCGCACTCCCTCCCTCTGCCCAGCCTTCCGTGCCCGCAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2166:HG4_PB_HySA_4350:HG4_PB_pbsv_2852:HG4_Ill_GATKHC_4803:HG4_Ill_GATKHCSBGrefine_1992:HG4_Ill_250bpfermikitraw_3971:HG4_Ill_150bpfermikitraw_3829:HG3_Ill_GATKHCSBGrefine_1924:HG3_10X_allpass_561:HG2_PB_pbsv_2844:HG2_Ill_GATKHCSBGrefine_1903:HG2_Ill_250bpfermikitraw_3939:HG4_PB_SVrefine2PBcRDovetail_1505:HG4_PB_SVrefine2Falcon1Dovetail_1732:HG4_Ill_SVrefine2DISCOVARDovetail_2146:HG2_PB_SVrefine2PBcRplusDovetail_6233:HG2_PB_SVrefine2PB10Xhap12_2104:HG2_Ill_SVrefine2DISCOVARplusDovetail_7356;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3939:HG2_Ill_GATKHCSBGrefine_1903:HG2_PB_pbsv_2844:HG3_10X_allpass_561:HG3_Ill_GATKHCSBGrefine_1924:HG4_Ill_150bpfermikitraw_3829:HG4_Ill_250bpfermikitraw_3971:HG4_Ill_GATKHCSBGrefine_1992:HG4_Ill_GATKHC_4803;NumExactMatchSVs=9;ClusterMaxShiftDist=0.212766;ClusterMaxSizeDiff=0.212766;ClusterMaxEditDist=0.212766;PBcalls=7;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-84;DistBack=-62;DistForward=-1;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=183;REFWIDENED=2:240097853-240098119;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:30:./.:21:13:15:12:./.:5:13:0:15:0/1:2:17:./.:.:.:.:.:.
chr2	240854056	HG2_Ill_manta_824	CACACATACATACACAGACACACACAAATATACAGACACAGAGATACACACACACACAGAGAACACATACATAGACACACACAAATATACAGAGATACACATACACACACAGA	C	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_9573:HG4_PB_pbsv_2872:HG2_PB_pbsv_2863:HG4_Ill_scalpel_2751:HG4_Ill_manta_708:HG4_Ill_GATKHC_4819:HG4_Ill_GATKHCSBGrefine_2003:HG4_Ill_250bpfermikitraw_3982:HG4_Ill_150bpfermikitraw_3838:HG3_PB_pbsv_2847:HG3_Ill_scalpel_2934:HG3_Ill_manta_651:HG3_Ill_GATKHCSBGrefine_1931:HG2_Ill_scalpel_2822:HG2_Ill_manta_824:HG2_Ill_GATKHC_4749:HG2_Ill_GATKHCSBGrefine_1907:HG3_Ill_MetaSV_2954:HG4_PB_HySA_4374;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1907:HG2_Ill_GATKHC_4749:HG2_Ill_manta_824:HG2_Ill_scalpel_2822:HG3_Ill_GATKHCSBGrefine_1931:HG3_Ill_manta_651:HG3_Ill_scalpel_2934:HG3_PB_pbsv_2847:HG4_Ill_150bpfermikitraw_3838:HG4_Ill_250bpfermikitraw_3982:HG4_Ill_GATKHCSBGrefine_2003:HG4_Ill_GATKHC_4819:HG4_Ill_manta_708:HG4_Ill_scalpel_2751;NumExactMatchSVs=14;ClusterMaxShiftDist=0.229249;ClusterMaxSizeDiff=0.229249;ClusterMaxEditDist=0.229249;PBcalls=4;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-112;DistBack=-1559;DistForward=565;DistMin=-1559;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1045;REFWIDENED=2:240853524-240854680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:41:15:./.:31:2:7:11:./.:1214:122:145:468:0/1:26:3:./.:.:.:.:.:.
chr2	240870171	HG4_Ill_SVrefine2DISCOVARDovetail_2155	CGGTGGATGGGTACAGCGAGCTCAGGAGGAGGGGCAGGGTCCAGGAGGGGTGTGGCAGGGAGGGAGGTCAGGAGGCCGCAGGGTCCT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2113:HG2_PB_assemblyticsfalcon_15051:HG3_PB_assemblyticsfalcon_15036:HG3_PB_SVrefine2Falcon1Dovetail_1791:HG2_PB_SVrefine2Falcon2Bionano_1249:HG4_PB_assemblyticsfalcon_14797:HG2_PB_pbsv_2865:HG4_PB_pbsv_2874:HG3_PB_pbsv_2849:HG4_PB_HySA_4376:HG4_Ill_250bpfermikitraw_3984:HG4_Ill_150bpfermikitraw_3840:HG3_Ill_250bpfermikitraw_3877:HG2_Ill_250bpfermikitraw_3956:HG4_PB_SVrefine2PBcRDovetail_1516:HG4_Ill_SVrefine2DISCOVARDovetail_2155:HG3_PB_SVrefine2PBcRDovetail_1433:HG3_Ill_SVrefine2DISCOVARDovetail_2133:HG2_PB_SVrefine2PBcRplusDovetail_6242;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2113:HG4_PB_SVrefine2PBcRDovetail_1516:HG4_Ill_SVrefine2DISCOVARDovetail_2155:HG3_PB_SVrefine2PBcRDovetail_1433:HG3_Ill_SVrefine2DISCOVARDovetail_2133:HG2_PB_SVrefine2PBcRplusDovetail_6242;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0346821;ClusterMaxSizeDiff=0.0346821;ClusterMaxEditDist=0.0813954;PBcalls=13;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-86;DistBack=803;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=177;REFWIDENED=2:240870172-240870434;PctSeqSimilarity=0.9688;PctSizeSimilarity=1;PctRecOverlap=0.6667;SizeDiff=0;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=87;MatchId=2165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:20:0|1:25:1:2:19:0/0:22:1:15:1:./.:30:3:./.:.:.:.:.:.
chr2	240958939	HG2_10X_SVrefine210Xhap12_2185	TAAAAAGAACGTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6243:HG2_PB_assemblyticsfalcon_15053:HG4_Ill_Krunchall_4220:HG3_Ill_Krunchall_4025:HG2_Ill_Krunchall_4035:HG4_PB_assemblyticsfalcon_14799:HG3_PB_assemblyticsfalcon_15038:HG2_PB_assemblyticsPBcR_14652:HG4_PB_pbsv_2875:HG2_PB_pbsv_2866:HG4_PB_HySA_4378:HG4_Ill_MetaSV_2903:HG3_Ill_MetaSV_2955:HG4_PB_SVrefine2PBcRDovetail_1517:HG4_PB_SVrefine2Falcon1Dovetail_1740:HG4_Ill_manta_709:HG4_Ill_SVrefine2DISCOVARDovetail_2156:HG4_Ill_GATKHCSBGrefine_2005:HG4_10X_allpass_525:HG3_PB_SVrefine2Falcon1Dovetail_1792:HG3_Ill_scalpel_2935:HG3_Ill_manta_653:HG3_Ill_GATKHCSBGrefine_1933:HG3_10X_allpass_562:HG2_PB_SVrefine2Falcon2Bionano_1250:HG2_PB_SVrefine2Falcon1plusDovetail_6737:HG2_Ill_manta_826:HG2_Ill_breakscan11_397:HG2_Ill_MetaSV_2811:HG2_Ill_GATKHCSBGrefine_1909:HG2_10X_allpass_449:HG2_10X_SVrefine210Xhap12_2185:HG3_PB_pbsv_2850:HG3_PB_SVrefine2PBcRDovetail_1434:HG2_PB_SVrefine2PB10Xhap12_2114:HG2_Ill_Spiral_196;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2185:HG2_10X_allpass_449:HG2_Ill_GATKHCSBGrefine_1909:HG2_Ill_MetaSV_2811:HG2_Ill_breakscan11_397:HG2_Ill_manta_826:HG2_PB_SVrefine2Falcon1plusDovetail_6737:HG2_PB_SVrefine2Falcon2Bionano_1250:HG3_10X_allpass_562:HG3_Ill_GATKHCSBGrefine_1933:HG3_Ill_manta_653:HG3_Ill_scalpel_2935:HG3_PB_SVrefine2Falcon1Dovetail_1792:HG4_10X_allpass_525:HG4_Ill_GATKHCSBGrefine_2005:HG4_Ill_SVrefine2DISCOVARDovetail_2156:HG4_Ill_manta_709:HG4_PB_SVrefine2Falcon1Dovetail_1740:HG4_PB_SVrefine2PBcRDovetail_1517;NumExactMatchSVs=19;ClusterMaxShiftDist=0.101426;ClusterMaxSizeDiff=0.101426;ClusterMaxEditDist=0.101426;PBcalls=16;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=30560;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=2:240958940-240959276;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:0|1:31:0:1:19:0|1:43:0:0:22:0/1:24:35:0/1:16:10:.:.:.
chr2	241045592	HG2_Ill_Krunchall_4036	TCTGTTGATGCAGCTCCCGTGCAGGCGTGGAGCACTCCCTGTGTGAGGACGTTCCTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2188:HG4_PB_pbsv_2879:HG3_PB_assemblyticsfalcon_15041:HG2_PB_pbsv_2869:HG4_PB_assemblyticsfalcon_14804:HG4_PB_SVrefine2PBcRDovetail_1520:HG4_Ill_svaba_3677:HG4_Ill_manta_712:HG4_Ill_Krunchall_4222:HG4_Ill_GATKHC_4823:HG4_Ill_GATKHCSBGrefine_2008:HG4_Ill_250bpfermikitraw_3987:HG4_Ill_150bpfermikitraw_3843:HG2_PB_SVrefine2PBcRplusDovetail_6246:HG2_PB_SVrefine2PB10Xhap12_2117:HG2_PB_SVrefine2Falcon2Bionano_1253:HG2_PB_SVrefine2Falcon1plusDovetail_6739:HG2_Ill_svaba_3586:HG2_Ill_scalpel_2823:HG2_Ill_manta_827:HG2_Ill_SpiralSDKrefine_9575:HG2_Ill_SVrefine2DISCOVARplusDovetail_7365:HG2_Ill_Krunchall_4036:HG2_Ill_GATKHC_4753:HG2_Ill_GATKHCSBGrefine_1911:HG2_Ill_250bpfermikitraw_3958:HG2_Ill_150bpfermikitraw_3682;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2188:HG4_PB_assemblyticsfalcon_14804:HG4_PB_SVrefine2PBcRDovetail_1520:HG4_Ill_svaba_3677:HG4_Ill_manta_712:HG4_Ill_Krunchall_4222:HG4_Ill_GATKHC_4823:HG4_Ill_GATKHCSBGrefine_2008:HG4_Ill_250bpfermikitraw_3987:HG4_Ill_150bpfermikitraw_3843:HG2_PB_SVrefine2PBcRplusDovetail_6246:HG2_PB_SVrefine2PB10Xhap12_2117:HG2_PB_SVrefine2Falcon2Bionano_1253:HG2_PB_SVrefine2Falcon1plusDovetail_6739:HG2_Ill_svaba_3586:HG2_Ill_scalpel_2823:HG2_Ill_manta_827:HG2_Ill_SpiralSDKrefine_9575:HG2_Ill_SVrefine2DISCOVARplusDovetail_7365:HG2_Ill_Krunchall_4036:HG2_Ill_GATKHC_4753:HG2_Ill_GATKHCSBGrefine_1911:HG2_Ill_250bpfermikitraw_3958:HG2_Ill_150bpfermikitraw_3682;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0178571;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.0357143;PBcalls=9;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=33151;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=42;REFWIDENED=2:241045593-241045690;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:34:./.:22:5:16:21:0|1:15:1:0:9:0/1:20:11:./.:.:.:.:.:.
chr2	241120934	HG4_Ill_Krunchall_4225	ATTCACACTTCTATGAAGAAATACCTGAAACTCGGTAACTTGTAAAGGAAAGAGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2193:HG2_PB_HySA_5523:HG3_PB_pbsv_2854:HG3_Ill_GATKHC_4867:HG3_Ill_GATKHCSBGrefine_1935:HG3_Ill_Spiral_3118:HG2_PB_pbsv_2872:HG3_PB_HySA_4491:HG4_PB_assemblyticsfalcon_14811:HG4_Ill_manta_713:HG4_Ill_Krunchall_4225:HG4_Ill_GATKHC_4828:HG4_Ill_GATKHCSBGrefine_2009:HG4_Ill_250bpfermikitraw_3990:HG3_PB_assemblyticsfalcon_15047:HG3_Ill_Krunchall_4028:HG3_Ill_250bpfermikitraw_3881:HG3_Ill_150bpfermikitraw_3765:HG2_Ill_SpiralSDKrefine_9577:HG2_Ill_GATKHCSBGrefine_1913:HG2_Ill_250bpfermikitraw_3960:HG4_PB_HySA_4390:HG4_PB_pbsv_2884:HG2_PB_SVrefine2Falcon2Bionano_1256:HG2_PB_SVrefine2Falcon1plusDovetail_6742;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3960:HG2_Ill_GATKHCSBGrefine_1913:HG2_Ill_SpiralSDKrefine_9577:HG3_Ill_150bpfermikitraw_3765:HG3_Ill_250bpfermikitraw_3881:HG3_Ill_Krunchall_4028:HG3_PB_assemblyticsfalcon_15047:HG4_Ill_250bpfermikitraw_3990:HG4_Ill_GATKHCSBGrefine_2009:HG4_Ill_GATKHC_4828:HG4_Ill_Krunchall_4225:HG4_Ill_manta_713:HG4_PB_assemblyticsfalcon_14811;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0550459;ClusterMaxSizeDiff=0.0550459;ClusterMaxEditDist=0.0943396;PBcalls=10;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-54;DistBack=12018;DistForward=-52;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=111;REFWIDENED=2:241120882-241121046;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:44:1|0:2:36:27:2:./.:17:2:0:4:0/1:29:13:./.:.:.:.:.:.
chr2	241241728	HG2_10X_SVrefine210Xhap12_2200	CCTTGTTCCAGGAGAATGAAGCATCCCGTGGACCAGGTCCACTGTCCTTGTTCCAGGAGACTGCAGCATCCCGTGGACCAGGTCCACCATCCATGTTGCAGAAGAGTGCAGCATCCCATGAACCAGGTCCACTATTCTTGTTGCAGGAGAGTACAGCATCGCATGGACAAGGTCCACCAGCCTTGTTCCAAGAGAGGGCAGCATCCCATGGACCAGGCCTACTGTGCTTGTTGCAGGAGATGTAGATGTTACCCAGAGCCGTGCTGGGAGTCACTCATATTGGTTCAAGGGTGTAGGACAGATGTTGACCCCCAGAAAGGGAGAGAAACACCTGAGCAGCATCCTATGGACTAGGTCCACTGCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2200:HG3_PB_pbsv_2858:HG4_Ill_GATKHCSBGrefine_2010:HG2_Ill_GATKHCSBGrefine_1917:HG4_PB_SVrefine2PBcRDovetail_1523:HG4_Ill_MetaSV_2904:HG2_Ill_MetaSV_2812:HG4_PB_HySA_4392:HG4_PB_pbsv_2886:HG2_PB_pbsv_2876:HG3_Ill_MetaSV_2956:HG2_PB_HySA_5530:HG3_PB_HySA_4493:HG4_PB_SVrefine2PBcRDovetail_1522:HG4_PB_SVrefine2Falcon1Dovetail_1746:HG4_Ill_SVrefine2DISCOVARDovetail_2160:HG3_PB_SVrefine2PBcRDovetail_1437:HG3_PB_SVrefine2Falcon1Dovetail_1797:HG3_Ill_SVrefine2DISCOVARDovetail_2137:HG2_PB_SVrefine2PBcRplusDovetail_6251:HG2_PB_SVrefine2PB10Xhap12_2124:HG2_PB_SVrefine2Falcon2Bionano_1258:HG2_PB_SVrefine2Falcon1plusDovetail_6744:HG2_Ill_SVrefine2DISCOVARplusDovetail_7370;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2200:HG4_PB_SVrefine2PBcRDovetail_1522:HG4_PB_SVrefine2Falcon1Dovetail_1746:HG4_Ill_SVrefine2DISCOVARDovetail_2160:HG3_PB_SVrefine2PBcRDovetail_1437:HG3_PB_SVrefine2Falcon1Dovetail_1797:HG3_Ill_SVrefine2DISCOVARDovetail_2137:HG2_PB_SVrefine2PBcRplusDovetail_6251:HG2_PB_SVrefine2PB10Xhap12_2124:HG2_PB_SVrefine2Falcon2Bionano_1258:HG2_PB_SVrefine2Falcon1plusDovetail_6744:HG2_Ill_SVrefine2DISCOVARplusDovetail_7370;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0193103;ClusterMaxSizeDiff=0.0193103;ClusterMaxEditDist=0.0387275;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-363;DistBack=2162;DistForward=83;DistMin=83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=448;REFWIDENED=2:241241729-241242539;PctSeqSimilarity=0.9857;PctSizeSimilarity=0.9972;PctRecOverlap=0.0385;SizeDiff=1;StartDistance=-350;EndDistance=-349;GTMatch=0;TruScore=67;MatchId=2169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:0:29:0:19:0/0:18:0:16:0:0/0:50:0:0/0:21:2:.:.:.
chr2	241392767	HG3_PB_assemblyticsfalcon_15054	ACCGCCCGCCCCGCTCCCTCCGCCCGCCCCGCTCCCTCCGCCCGCCCCGCTCCCTCCGCCCGCCCCGCTCCCT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_2894:HG4_PB_HySA_4399:HG4_PB_assemblyticsfalcon_14814:HG3_PB_assemblyticsfalcon_15054:HG2_PB_assemblyticsfalcon_15071:HG3_PB_HySA_4497:HG4_Ill_250bpfermikitraw_3993:HG2_PB_assemblyticsPBcR_14672:HG2_PB_HySA_5534:HG3_PB_pbsv_2862:HG2_PB_pbsv_2885;NumClusterSVs=11;ExactMatchIDs=HG3_PB_assemblyticsfalcon_15054:HG4_PB_assemblyticsfalcon_14814;NumExactMatchSVs=2;ClusterMaxShiftDist=0.241135;ClusterMaxSizeDiff=0.241135;ClusterMaxEditDist=0.241135;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-72;DistBack=12582;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=86;REFWIDENED=2:241392735-241392874;PctSeqSimilarity=0.9605;PctSizeSimilarity=0.9351;PctRecOverlap=0.4744;SizeDiff=-5;StartDistance=41;EndDistance=36;GTMatch=0;TruScore=78;MatchId=2170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:44:1/1:2:14:2:20:./.:1:1:0:0:./.:0:0:./.:.:.:.:.:.
chr2	241437886	HG2_Ill_svaba_3597	ACAGCTGTGGGGGTGGAGCTGAGGGGGGTGTGCGGGCAGCTGTGGGGGTGGAGCTGAGGGGGTGTGCGGG	A	20	PASS	ClusterIDs=HG3_PB_HySA_4499:HG2_PB_pbsv_2886:HG3_PB_pbsv_2863:HG3_Ill_svaba_3688:HG3_Ill_scalpel_2940:HG3_Ill_Krunchall_4035:HG3_Ill_GATKHC_4877:HG3_Ill_GATKHCSBGrefine_1940:HG3_Ill_250bpfermikitraw_3890:HG3_Ill_150bpfermikitraw_3774:HG3_10X_allpass_565:HG2_PB_assemblyticsPBcR_14675:HG2_Ill_svaba_3597:HG2_Ill_scalpel_2832:HG2_Ill_SpiralSDKrefine_9585:HG2_Ill_Krunchall_4047:HG2_Ill_GATKHC_4771:HG2_Ill_GATKHCSBGrefine_1919:HG2_Ill_250bpfermikitraw_3969:HG2_Ill_150bpfermikitraw_3693:HG2_Ill_breakscan11_400;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3693:HG2_Ill_250bpfermikitraw_3969:HG2_Ill_GATKHCSBGrefine_1919:HG2_Ill_GATKHC_4771:HG2_Ill_Krunchall_4047:HG2_Ill_SpiralSDKrefine_9585:HG2_Ill_scalpel_2832:HG2_Ill_svaba_3597:HG2_PB_assemblyticsPBcR_14675:HG3_10X_allpass_565:HG3_Ill_150bpfermikitraw_3774:HG3_Ill_250bpfermikitraw_3890:HG3_Ill_GATKHCSBGrefine_1940:HG3_Ill_GATKHC_4877:HG3_Ill_Krunchall_4035:HG3_Ill_scalpel_2940:HG3_Ill_svaba_3688:HG3_PB_pbsv_2863;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.0694444;PBcalls=4;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-69;DistBack=26208;DistForward=1853;DistMin=1853;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=34;REFWIDENED=2:241437877-241437979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:29:./.:9:10:5:17:1|0:0:21:30:1:0/1:5:24:./.:.:.:.:.:.
chr2	241562784	HG2_PB_SVrefine2PB10Xhap12_2130	CGCAAACAGGTCGTGAGGGCGCAAACAGGTCGTGAGGGCGCAAACAGATCGTGAGGGCGCAAACAGGTCGTGAGGGCGCAAACAGGTCGTGAGGGT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_2888:HG2_PB_assemblyticsfalcon_15077:HG2_PB_HySA_5542:HG2_Ill_Spiral_197:HG4_Ill_GATKHC_4841:HG4_PB_assemblyticsfalcon_14820:HG3_Ill_GATKHCSBGrefine_1943:HG4_PB_HySA_4402:HG2_Ill_GATKHC_4775:HG2_Ill_GATKHCSBGrefine_1921:HG4_Ill_SVrefine2DISCOVARDovetail_2164:HG3_PB_assemblyticsfalcon_15057:HG3_PB_SVrefine2Falcon1Dovetail_1803:HG2_Ill_SpiralSDKrefine_9588:HG2_PB_SVrefine2PB10Xhap12_2131:HG2_PB_HySA_5541:HG4_Ill_250bpfermikitraw_3997:HG3_Ill_SVrefine2DISCOVARDovetail_2141:HG3_Ill_GATKHCSBGrefine_1942:HG3_Ill_250bpfermikitraw_3892:HG2_PB_SVrefine2PBcRplusDovetail_6256:HG2_PB_SVrefine2PB10Xhap12_2130:HG2_PB_SVrefine2Falcon2Bionano_1263:HG2_PB_SVrefine2Falcon1plusDovetail_6748:HG2_Ill_SVrefine2DISCOVARplusDovetail_7375:HG2_Ill_GATKHC_4774:HG2_Ill_250bpfermikitraw_3972:HG2_Ill_150bpfermikitraw_3694:HG3_PB_pbsv_2865:HG4_PB_pbsv_2896;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3694:HG2_Ill_250bpfermikitraw_3972:HG2_Ill_GATKHC_4774:HG2_Ill_SVrefine2DISCOVARplusDovetail_7375:HG2_PB_SVrefine2Falcon1plusDovetail_6748:HG2_PB_SVrefine2Falcon2Bionano_1263:HG2_PB_SVrefine2PB10Xhap12_2130:HG2_PB_SVrefine2PBcRplusDovetail_6256:HG3_Ill_250bpfermikitraw_3892:HG3_Ill_GATKHCSBGrefine_1942:HG3_Ill_SVrefine2DISCOVARDovetail_2141:HG4_Ill_250bpfermikitraw_3997;NumExactMatchSVs=12;ClusterMaxShiftDist=0.365854;ClusterMaxSizeDiff=0.365854;ClusterMaxEditDist=0.37037;PBcalls=15;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-95;DistBack=35;DistForward=-58;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=154;REFWIDENED=2:241562691-241562939;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:39:1/1:2:19:4:13:./.:0:5:0:4:1/1:1:27:./.:.:.:.:.:.
chr2	242032877	HG3_Ill_250bpfermikitraw_3908	TTGTGTCAACAAGAACTGGCTCCTGAGTCCCAAGCTTGGTGCCACACAGCAAATGCTAATATGCTCCAGTGTTAGCTTAGAAGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2220:HG2_PB_pbsv_2911:HG4_PB_pbsv_2917:HG4_Ill_svaba_3708:HG4_Ill_Krunchall_4244:HG4_Ill_GATKHC_4863:HG4_Ill_GATKHCSBGrefine_2024:HG4_Ill_250bpfermikitraw_4013:HG3_Ill_svaba_3715:HG3_Ill_Krunchall_4053:HG3_Ill_GATKHC_4901:HG3_Ill_GATKHCSBGrefine_1953:HG3_Ill_250bpfermikitraw_3908:HG2_Ill_svaba_3619:HG2_Ill_Krunchall_4061:HG2_Ill_GATKHC_4793:HG2_Ill_GATKHCSBGrefine_1934:HG2_Ill_250bpfermikitraw_3990:HG2_Ill_150bpfermikitraw_3708:HG3_PB_pbsv_2886:HG4_PB_SVrefine2PBcRDovetail_1533:HG3_PB_SVrefine2PBcRDovetail_1450:HG2_PB_SVrefine2PBcRplusDovetail_6271:HG2_PB_SVrefine2PB10Xhap12_2150:HG2_PB_SVrefine2Falcon2Bionano_1275:HG2_PB_SVrefine2Falcon1plusDovetail_6762:HG2_Ill_SVrefine2DISCOVARplusDovetail_7381;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3708:HG2_Ill_250bpfermikitraw_3990:HG2_Ill_GATKHCSBGrefine_1934:HG2_Ill_GATKHC_4793:HG2_Ill_Krunchall_4061:HG2_Ill_svaba_3619:HG3_Ill_250bpfermikitraw_3908:HG3_Ill_GATKHCSBGrefine_1953:HG3_Ill_GATKHC_4901:HG3_Ill_Krunchall_4053:HG3_Ill_svaba_3715:HG4_Ill_250bpfermikitraw_4013:HG4_Ill_GATKHCSBGrefine_2024:HG4_Ill_GATKHC_4863:HG4_Ill_Krunchall_4244:HG4_Ill_svaba_3708;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0238095;ClusterMaxSizeDiff=0.0235294;ClusterMaxEditDist=0.047619;PBcalls=9;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-84;DistBack=-125;DistForward=15099;DistMin=-125;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=165;REFWIDENED=2:242032832-242033080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2173.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:51:1/1:5:26:0:15:1/1:0:11:0:10:1/1:0:41:./.:.:.:.:.:.
chr2	242048455	HG3_Ill_GATKHC_4903	TCCACGCTACCATTTATTTCCTGTCGCCGTAAACATCCTCATCCACGCTACCATTTATTTCCTGTCACCGTAAACATCCTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_2887:HG3_PB_assemblyticsfalcon_15084:HG2_PB_assemblyticsfalcon_15101:HG4_Ill_GATKHC_4864:HG4_Ill_GATKHCSBGrefine_2025:HG3_Ill_GATKHC_4903:HG3_Ill_GATKHCSBGrefine_1954:HG2_Ill_GATKHC_4795:HG2_Ill_GATKHCSBGrefine_1935:HG3_PB_HySA_4544:HG4_Ill_Krunchall_4245:HG4_Ill_250bpfermikitraw_4014:HG3_Ill_Krunchall_4055:HG2_Ill_Krunchall_4063:HG4_PB_pbsv_2918:HG2_PB_pbsv_2912;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1935:HG2_Ill_GATKHC_4795:HG3_Ill_GATKHCSBGrefine_1954:HG3_Ill_GATKHC_4903:HG4_Ill_GATKHCSBGrefine_2025:HG4_Ill_GATKHC_4864;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.110429;PBcalls=6;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-80;DistBack=361;DistForward=-77;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=171;REFWIDENED=2:242048345-242048595;PctSeqSimilarity=0.9714;PctSizeSimilarity=0.9877;PctRecOverlap=0.9634;SizeDiff=-1;StartDistance=3;EndDistance=2;GTMatch=0;TruScore=97;MatchId=2174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:67:1/1:2:29:3:31:0/0:14:1:11:0:0/1:31:11:./.:.:.:.:.:.
chr2	242055328	HG3_Ill_GATKHC_4905	GTTACACCAGGGGCCACCATCAGTCCTCAAGCATCCCATTACGCCGGGGCCACCTGGTCCTCAAGCATCCCA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_3711:HG3_PB_pbsv_2888:HG3_PB_HySA_4546:HG2_PB_pbsv_2913:HG4_Ill_svaba_3710:HG4_Ill_scalpel_2766:HG4_Ill_GATKHC_4866:HG3_PB_assemblyticsfalcon_15086:HG3_Ill_svaba_3718:HG3_Ill_scalpel_2952:HG3_Ill_GATKHC_4905:HG3_Ill_150bpfermikitraw_3791:HG2_PB_assemblyticsfalcon_15103:HG2_PB_assemblyticsPBcR_14700:HG2_Ill_svaba_3622:HG2_Ill_scalpel_2843:HG2_Ill_GATKHC_4797;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3711:HG4_Ill_svaba_3710:HG4_Ill_scalpel_2766:HG4_Ill_GATKHC_4866:HG3_PB_assemblyticsfalcon_15086:HG3_Ill_svaba_3718:HG3_Ill_scalpel_2952:HG3_Ill_GATKHC_4905:HG3_Ill_150bpfermikitraw_3791:HG2_PB_assemblyticsfalcon_15103:HG2_PB_assemblyticsPBcR_14700:HG2_Ill_svaba_3622:HG2_Ill_scalpel_2843:HG2_Ill_GATKHC_4797;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0277778;ClusterMaxSizeDiff=0.0277778;ClusterMaxEditDist=0.0422535;PBcalls=6;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-71;DistBack=119;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=683;REFWIDENED=2:242054869-242055622;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2175.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:39:./.:6:10:15:14:1/1:1:11:0:12:./.:0:1:./.:.:.:.:.:.
chr2	242144559	HG2_PB_SVrefine2Falcon1plusDovetail_6764	CAGGTGGACAGGAGTGCTCCCAGGCTGACAGGTGGACAGGAGTGCTCCCAGGCTGACAGGTGGACAGGAGTGCTCCCAAACTGACAGGTGGTCAGGAGCACTCCCAGACTGACAGGCAGACGGGGCGCTCCCAGGCTGACAGGTAGTCAGGAGTGCTCCCAGGCTGGCACCGGTGGATAGGAGTGCTCCCAGGCTGACAGGTGGTCAGGAGTGCTCCCAGGCTGATAGGTGGACAGGAGTGCTCCCAGGCTGACAGGTAGCTAGGACTGCTCTCAGGCTGAAACAGGTAGACAGGTGTGCTCTCAGGCTGACACAGGTGGATAAGAGTGCTCCAAGGCTGACACAGGTGGACAGGAGTGCTCCCAGTCTGACAGGTGGACAGGAGTGCTCCAAGGCTGACACAGGTGGACAGGAGTGCTCCCAGTCTGACAGGTGGACAGGAGTGCTCCCAGGCTGACACAGGTGGACAGGAGTGCTCCCAGCCTGACACAGGTGGGCAGGAGTGCTCCCAGCCTGACACAGGTGGACAGGAGTGCTCCAAGGCTGACACAGGTGGACAGGAGTGTTCCCAGTCTGACAAGTGGACAGGAGTGCTCCCAGGCTGACAGGTGGACAGGAGTGCTCCCAGTCTGACAGGTGGACAGGAGTGCTCCCAGTCTGACAGGTGGACAGGAGTGCTCCCAGGCTGACAGGTGGGCAGGAGTGCTCCCAGCCTGACACAGGTGGGCAGGAGTGCTACCAGGCTGACACAGGTGGACAGGAGTGCTCCCAGGCTGACAT	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6764:HG4_PB_pbsv_2922:HG2_PB_pbsv_2916:HG2_PB_HySA_5561:HG3_PB_pbsv_2890:HG4_PB_SVrefine2PBcRDovetail_1536:HG4_PB_SVrefine2Falcon1Dovetail_1763:HG3_PB_SVrefine2PBcRDovetail_1452:HG3_PB_SVrefine2Falcon1Dovetail_1816:HG2_PB_SVrefine2PBcRplusDovetail_6273:HG2_PB_SVrefine2PB10Xhap12_2152:HG2_PB_SVrefine2Falcon2Bionano_1277;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6764:HG4_PB_SVrefine2PBcRDovetail_1536:HG4_PB_SVrefine2Falcon1Dovetail_1763:HG3_PB_SVrefine2PBcRDovetail_1452:HG3_PB_SVrefine2Falcon1Dovetail_1816:HG2_PB_SVrefine2PBcRplusDovetail_6273:HG2_PB_SVrefine2PB10Xhap12_2152:HG2_PB_SVrefine2Falcon2Bionano_1277;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0127714;ClusterMaxSizeDiff=0.0102041;ClusterMaxEditDist=0.0957854;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-779;DistBack=3900;DistForward=-383;DistMin=-383;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1358;REFWIDENED=2:242144559-242146695;PctSeqSimilarity=0.9431;PctSizeSimilarity=0.9924;PctRecOverlap=0.159;SizeDiff=-6;StartDistance=-655;EndDistance=-661;GTMatch=1;TruScore=69;MatchId=2176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:35:./.:5:17:8:9:./.:11:1:13:0:0/0:33:0:0/1:49:9:.:.:.
chr2	242146553	HG4_Ill_150bpfermikitraw_3867	GCTGACAGGTGGACAGGAGTGCTCCCAGGCTGACACAGGTGGTCAGGAGTGCTCCCAGT	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_14704:HG4_PB_pbsv_2923:HG2_PB_pbsv_2917:HG3_PB_pbsv_2891:HG4_PB_assemblyticsfalcon_14848:HG4_Ill_svaba_3713:HG4_Ill_scalpel_2768:HG4_Ill_GATKHC_4869:HG4_Ill_250bpfermikitraw_4018:HG4_Ill_150bpfermikitraw_3867:HG3_PB_assemblyticsfalcon_15090:HG3_Ill_svaba_3719:HG3_Ill_scalpel_2953:HG3_Ill_GATKHC_4906:HG2_PB_assemblyticsfalcon_15106:HG2_PB_HySA_5562:HG2_Ill_svaba_3624:HG2_Ill_scalpel_2845:HG2_Ill_GATKHC_4800:HG2_Ill_250bpfermikitraw_3994;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3994:HG2_Ill_GATKHC_4800:HG2_Ill_scalpel_2845:HG2_Ill_svaba_3624:HG2_PB_HySA_5562:HG2_PB_assemblyticsfalcon_15106:HG3_Ill_GATKHC_4906:HG3_Ill_scalpel_2953:HG3_Ill_svaba_3719:HG3_PB_assemblyticsfalcon_15090:HG4_Ill_150bpfermikitraw_3867:HG4_Ill_250bpfermikitraw_4018:HG4_Ill_GATKHC_4869:HG4_Ill_scalpel_2768:HG4_Ill_svaba_3713:HG4_PB_assemblyticsfalcon_14848;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0172414;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.0344828;PBcalls=8;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=-54;DistForward=5977;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=41;REFWIDENED=2:242146552-242146653;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2176.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:34:1/1:2:18:0:8:./.:0:4:0:10:1/1:0:17:./.:.:.:.:.:.
chr2	242265815	HG3_PB_SVrefine2Falcon1Dovetail_1817	TCCCTTCCTGCATTGAATAGGGTTTTACCTGTGTAGCCAGTAGGACATTGTGGAGATGAAAGTGTTGTCATTTTCTAAGACTAGGTCATAAAAGGCATTATGGCCCCCCACCTTGCCTCTTCTCAAATTACTCACTCTGGAGGAAGCCAG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2225:HG2_PB_HySA_5564:HG4_PB_HySA_4435:HG2_PB_pbsv_2918:HG4_PB_pbsv_2924:HG3_PB_pbsv_2892:HG4_PB_SVrefine2PBcRDovetail_1537:HG4_PB_SVrefine2Falcon1Dovetail_1764:HG4_Ill_SVrefine2DISCOVARDovetail_2171:HG4_Ill_250bpfermikitraw_4020:HG4_Ill_150bpfermikitraw_3868:HG4_10X_allpass_527:HG3_PB_SVrefine2PBcRDovetail_1453:HG3_PB_SVrefine2Falcon1Dovetail_1817:HG3_Ill_SVrefine2DISCOVARDovetail_2155:HG2_PB_SVrefine2PBcRplusDovetail_6274:HG2_PB_SVrefine2PB10Xhap12_2153:HG2_PB_SVrefine2Falcon2Bionano_1278:HG2_PB_SVrefine2Falcon1plusDovetail_6765:HG2_Ill_SVrefine2DISCOVARplusDovetail_7385;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2225:HG4_PB_SVrefine2PBcRDovetail_1537:HG4_PB_SVrefine2Falcon1Dovetail_1764:HG4_Ill_SVrefine2DISCOVARDovetail_2171:HG4_Ill_250bpfermikitraw_4020:HG4_Ill_150bpfermikitraw_3868:HG4_10X_allpass_527:HG3_PB_SVrefine2PBcRDovetail_1453:HG3_PB_SVrefine2Falcon1Dovetail_1817:HG3_Ill_SVrefine2DISCOVARDovetail_2155:HG2_PB_SVrefine2PBcRplusDovetail_6274:HG2_PB_SVrefine2PB10Xhap12_2153:HG2_PB_SVrefine2Falcon2Bionano_1278:HG2_PB_SVrefine2Falcon1plusDovetail_6765:HG2_Ill_SVrefine2DISCOVARplusDovetail_7385;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0266667;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.027027;PBcalls=13;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-149;DistBack=28292;DistForward=-44;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=150;REFWIDENED=2:242265816-242266114;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:68:1/1:1:37:3:27:./.:0:5:0:5:1/1:0:30:./.:.:.:.:.:.
chr2	242422384	HG2_Ill_150bpfermikitraw_3717	TTGGTGCTAATTTGAATACTCGGGAGAACCCTCCTTTCCTCCTCCCATTCTCGAACCTGCTCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2228:HG2_PB_assemblyticsfalcon_15112:HG2_PB_pbsv_2923:HG4_Ill_Krunchall_4249:HG4_Ill_GATKHC_4873:HG4_Ill_GATKHCSBGrefine_2028:HG4_Ill_250bpfermikitraw_4023:HG4_Ill_150bpfermikitraw_3871:HG2_Ill_SpiralSDKrefine_9607:HG2_Ill_Krunchall_4069:HG2_Ill_GATKHC_4805:HG2_Ill_GATKHCSBGrefine_1941:HG2_Ill_250bpfermikitraw_3998:HG2_Ill_150bpfermikitraw_3717:HG4_PB_pbsv_2929:HG4_PB_HySA_4441:HG4_PB_SVrefine2PBcRDovetail_1541:HG4_Ill_SVrefine2DISCOVARDovetail_2173:HG2_PB_SVrefine2PBcRplusDovetail_6277:HG2_PB_SVrefine2PB10Xhap12_2156;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3717:HG2_Ill_250bpfermikitraw_3998:HG2_Ill_GATKHCSBGrefine_1941:HG2_Ill_GATKHC_4805:HG2_Ill_Krunchall_4069:HG2_Ill_SpiralSDKrefine_9607:HG4_Ill_150bpfermikitraw_3871:HG4_Ill_250bpfermikitraw_4023:HG4_Ill_GATKHCSBGrefine_2028:HG4_Ill_GATKHC_4873:HG4_Ill_Krunchall_4249;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0472441;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.0793651;PBcalls=7;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-62;DistBack=10898;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=126;REFWIDENED=2:242422323-242422510;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:32:0|1:32:1:0:26:0|1:17:1:0:13:0/1:25:19:./.:.:.:.:.:.
chr2	242510220	HG2_PB_pbsv_2925	AGGAGGGAGTGGTGGATGGGTGAGCCTCTGAGCGCCTGGGGGGTGGGAGAGCTGGGGTGCGAGGGTACAGACGTACG	A	10	PASS	ClusterIDs=HG2_PB_pbsv_2925:HG3_PB_pbsv_2897:HG2_PB_HySA_5572:HG4_PB_pbsv_2933;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_2925:HG4_PB_pbsv_2933;NumExactMatchSVs=2;ClusterMaxShiftDist=0.012987;ClusterMaxSizeDiff=0.0129032;ClusterMaxEditDist=0.0774194;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-76;DistBack=142;DistForward=-21;DistMin=-21;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=698;REFWIDENED=2:242509698-242510471;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2179.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:13:52:1/1:4:13:1:8:./.:0:3:0:2:./.:0:0:./.:.:.:.:.:.
chr2	242608433	HG2_Ill_Krunchall_4070	CACACGGGCGGCCCCTCCACCCACCCCTGCACCACCTTCGTCACACCCACATTTAA	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_1826:HG2_PB_assemblyticsPBcR_14715:HG2_PB_HySA_5576:HG2_PB_assemblyticsfalcon_15118:HG3_PB_pbsv_2903:HG2_PB_pbsv_2929:HG4_PB_pbsv_2939:HG3_PB_HySA_4553:HG4_PB_assemblyticsfalcon_14861:HG4_Ill_svaba_3716:HG4_Ill_scalpel_2770:HG4_Ill_manta_716:HG4_Ill_Krunchall_4251:HG4_Ill_GATKHC_4875:HG4_Ill_GATKHCSBGrefine_2030:HG4_Ill_250bpfermikitraw_4024:HG4_Ill_150bpfermikitraw_3873:HG3_Ill_svaba_3727:HG3_Ill_scalpel_2957:HG3_Ill_Krunchall_4062:HG3_Ill_GATKHC_4915:HG3_Ill_GATKHCSBGrefine_1962:HG3_Ill_250bpfermikitraw_3919:HG2_Ill_svaba_3630:HG2_Ill_scalpel_2848:HG2_Ill_manta_835:HG2_Ill_SpiralSDKrefine_9609:HG2_Ill_Krunchall_4070:HG2_Ill_GATKHC_4807:HG2_Ill_GATKHCSBGrefine_1943:HG2_Ill_250bpfermikitraw_4000:HG2_Ill_150bpfermikitraw_3719:HG4_PB_HySA_4456;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3719:HG2_Ill_250bpfermikitraw_4000:HG2_Ill_GATKHCSBGrefine_1943:HG2_Ill_GATKHC_4807:HG2_Ill_Krunchall_4070:HG2_Ill_SpiralSDKrefine_9609:HG2_Ill_manta_835:HG2_Ill_scalpel_2848:HG2_Ill_svaba_3630:HG3_Ill_250bpfermikitraw_3919:HG3_Ill_GATKHCSBGrefine_1962:HG3_Ill_GATKHC_4915:HG3_Ill_Krunchall_4062:HG3_Ill_scalpel_2957:HG3_Ill_svaba_3727:HG4_Ill_150bpfermikitraw_3873:HG4_Ill_250bpfermikitraw_4024:HG4_Ill_GATKHCSBGrefine_2030:HG4_Ill_GATKHC_4875:HG4_Ill_Krunchall_4251:HG4_Ill_manta_716:HG4_Ill_scalpel_2770:HG4_Ill_svaba_3716:HG4_PB_assemblyticsfalcon_14861;NumExactMatchSVs=24;ClusterMaxShiftDist=0.151261;ClusterMaxSizeDiff=0.151261;ClusterMaxEditDist=0.180328;PBcalls=10;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=43220;DistForward=-20;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=59;REFWIDENED=2:242608416-242608529;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:./.:1:8:0:4:1/1:0:13:0:14:1/1:0:39:./.:.:.:.:.:.
chr2	242704671	HG3_PB_SVrefine2PBcRDovetail_1458	CTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAACTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAACTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAACTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAACTTGGGGAGATGGGAGCCCCGGGCTGAGGGATTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGGTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAACTTGGGGAGATGGGAGCCCCGGGCTGAGTGAGTAGGAAGAGGGGGGAGAACTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGGTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAACTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAACTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAAGTTGGGGAGATGGGAGCCCCGGGCTGAGGGAGTAGGAAGAGGGGGGAGAACT	C	10	PASS	ClusterIDs=HG4_PB_pbsv_2945:HG2_PB_HySA_5578:HG2_PB_pbsv_2931:HG3_PB_pbsv_2905:HG4_PB_pbsv_2946:HG2_PB_SVrefine2Falcon1plusDovetail_6775:HG4_PB_SVrefine2PBcRDovetail_1550:HG4_PB_SVrefine2Falcon1Dovetail_1771:HG3_PB_SVrefine2PBcRDovetail_1458:HG3_PB_SVrefine2Falcon1Dovetail_1828:HG2_PB_SVrefine2PBcRplusDovetail_6283:HG2_PB_SVrefine2PB10Xhap12_2161:HG2_PB_SVrefine2Falcon2Bionano_1286;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1286:HG2_PB_SVrefine2PB10Xhap12_2161:HG2_PB_SVrefine2PBcRplusDovetail_6283:HG3_PB_SVrefine2Falcon1Dovetail_1828:HG3_PB_SVrefine2PBcRDovetail_1458:HG4_PB_SVrefine2Falcon1Dovetail_1771;NumExactMatchSVs=6;ClusterMaxShiftDist=0.159415;ClusterMaxSizeDiff=0.159415;ClusterMaxEditDist=0.159415;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-1500;DistBack=4889;DistForward=-1444;DistMin=-1444;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=229;REFWIDENED=2:242704672-242706400;PctSeqSimilarity=0.996;PctSizeSimilarity=0.9993;PctRecOverlap=0.6676;SizeDiff=1;StartDistance=-499;EndDistance=-498;GTMatch=0;TruScore=88;MatchId=2181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:50:1/1:1:22:2:9:./.:0:0:0:0:./.:0:0:1/1:2:49:1360:.:.
chr2	242751776	HG4_Ill_150bpfermikitraw_3878	GCAGGCTGGGGGCAGGCCAGCGTGAAAGGGACTGGCAGGAGTCCTGTGGGGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2237:HG4_PB_assemblyticsfalcon_14868:HG2_PB_pbsv_2933:HG4_PB_pbsv_2948:HG3_PB_assemblyticsfalcon_15110:HG4_Ill_SVrefine2DISCOVARDovetail_2180:HG4_Ill_Krunchall_4256:HG4_Ill_250bpfermikitraw_4031:HG4_Ill_150bpfermikitraw_3878:HG2_PB_SVrefine2PB10Xhap12_2164:HG2_Ill_250bpfermikitraw_4002;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2237:HG4_Ill_SVrefine2DISCOVARDovetail_2180:HG4_Ill_Krunchall_4256:HG4_Ill_250bpfermikitraw_4031:HG4_Ill_150bpfermikitraw_3878:HG2_PB_SVrefine2PB10Xhap12_2164:HG2_Ill_250bpfermikitraw_4002;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0196078;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0776699;PBcalls=5;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=2604;DistForward=1322;DistMin=1322;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=152;REFWIDENED=2:242751777-242751979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:12:0|1:11:1:2:10:./.:3:1:0:1:0/1:14:13:./.:.:.:3705:.:.
chr3	982589	HG3_10X_allpass_570	CAAAAGATCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTAGTGGCGGGCGCCTGTAGTCCAAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAATAAATAAAT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_2936:HG2_PB_pbsv_2969:HG3_PB_assemblyticsfalcon_17037:HG2_10X_allpass_454:HG2_PB_assemblyticsfalcon_17097:HG3_Ill_MetaSV_3300:HG2_PB_SVrefine2Falcon1plusDovetail_7776:HG2_Ill_tnscope_311:HG2_Ill_MetaSV_3143:HG3_PB_SVrefine2PBcRDovetail_1473:HG3_PB_SVrefine2Falcon1Dovetail_1851:HG3_Ill_scalpel_2963:HG3_Ill_manta_659:HG3_Ill_SVrefine2DISCOVARDovetail_2170:HG3_Ill_GATKHCSBGrefine_1974:HG3_10X_allpass_570:HG2_PB_SVrefine2Falcon2Bionano_1305:HG2_Ill_manta_839:HG2_Ill_GATKHCSBGrefine_1959;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1959:HG2_Ill_manta_839:HG2_PB_SVrefine2Falcon2Bionano_1305:HG3_10X_allpass_570:HG3_Ill_GATKHCSBGrefine_1974:HG3_Ill_SVrefine2DISCOVARDovetail_2170:HG3_Ill_manta_659:HG3_Ill_scalpel_2963:HG3_PB_SVrefine2Falcon1Dovetail_1851:HG3_PB_SVrefine2PBcRDovetail_1473;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0479233;ClusterMaxSizeDiff=0.0479233;ClusterMaxEditDist=0.0479233;PBcalls=8;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=20067;DistForward=5411;DistMin=5411;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=3:982590-982913;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2445.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:31:0|1:36:2:2:25:./.:0:0:0:0:0/1:58:18:0/1:27:12:.:.:.
chr3	1285986	HG4_Ill_SVrefine2DISCOVARDovetail_2190	GGAAGGGGTTTGGGGGTTCTTGCCTCCTAGAAAAGTGGGACTTGCCGCTGAGGGTGAAGGA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8258:HG3_PB_assemblyticsfalcon_17044:HG4_PB_pbsv_2988:HG2_PB_pbsv_2973:HG3_PB_pbsv_2940:HG3_PB_HySA_4582:HG4_PB_assemblyticsfalcon_16745:HG4_Ill_250bpfermikitraw_4062:HG4_Ill_150bpfermikitraw_3909:HG3_Ill_250bpfermikitraw_3942:HG3_Ill_150bpfermikitraw_3817:HG2_Ill_SpiralSDKrefine_10713:HG2_Ill_250bpfermikitraw_4027:HG4_PB_SVrefine2PBcRDovetail_1568:HG4_Ill_SVrefine2DISCOVARDovetail_2190:HG3_PB_SVrefine2PBcRDovetail_1477:HG3_Ill_SVrefine2DISCOVARDovetail_2173:HG2_PB_SVrefine2PBcRplusDovetail_7212:HG2_PB_SVrefine2PB10Xhap12_2194:HG2_PB_SVrefine2Falcon2Bionano_1308:HG2_PB_SVrefine2Falcon1plusDovetail_7780;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8258:HG4_PB_SVrefine2PBcRDovetail_1568:HG4_Ill_SVrefine2DISCOVARDovetail_2190:HG3_PB_SVrefine2PBcRDovetail_1477:HG3_Ill_SVrefine2DISCOVARDovetail_2173:HG2_PB_SVrefine2PBcRplusDovetail_7212:HG2_PB_SVrefine2PB10Xhap12_2194:HG2_PB_SVrefine2Falcon2Bionano_1308:HG2_PB_SVrefine2Falcon1plusDovetail_7780;NumExactMatchSVs=9;ClusterMaxShiftDist=0.09375;ClusterMaxSizeDiff=0.09375;ClusterMaxEditDist=0.211382;PBcalls=12;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=1;DistForward=855;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=166;REFWIDENED=3:1285987-1286212;PctSeqSimilarity=0.9432;PctSizeSimilarity=0.9375;PctRecOverlap=0.4;SizeDiff=-4;StartDistance=-35;EndDistance=-39;GTMatch=0;TruScore=76;MatchId=2446.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:0:17:2:26:./.:0:0:0:0:0/1:23:9:./.:.:.:.:.:.
chr3	1629482	HG2_Ill_250bpfermikitraw_4031	CTATAAGTACAATATAGGTACAATCCCTGTTGTACCTATAAGTACAATATACGTACAGTA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_2942:HG4_PB_assemblyticsfalcon_16749:HG3_PB_assemblyticsfalcon_17048:HG4_PB_HySA_4496:HG2_PB_HySA_5622:HG4_PB_pbsv_2991:HG4_PB_SVrefine2PBcRDovetail_1570:HG4_PB_SVrefine2Falcon1Dovetail_1795:HG4_Ill_svaba_3746:HG4_Ill_scalpel_2794:HG4_Ill_manta_722:HG4_Ill_SVrefine2DISCOVARDovetail_2193:HG4_Ill_Krunchall_4282:HG4_Ill_GATKHC_4923:HG4_Ill_GATKHCSBGrefine_2049:HG4_Ill_250bpfermikitraw_4067:HG4_Ill_150bpfermikitraw_3914:HG4_10X_allpass_532:HG3_PB_SVrefine2PBcRDovetail_1479:HG3_PB_SVrefine2Falcon1Dovetail_1854:HG3_PB_HySA_4584:HG3_Ill_svaba_3761:HG3_Ill_scalpel_2975:HG3_Ill_manta_660:HG3_Ill_SVrefine2DISCOVARDovetail_2175:HG3_Ill_Krunchall_4077:HG3_Ill_GATKHC_4957:HG3_Ill_GATKHCSBGrefine_1979:HG3_Ill_250bpfermikitraw_3946:HG3_Ill_150bpfermikitraw_3819:HG3_10X_allpass_571:HG2_PB_pbsv_2977:HG2_PB_assemblyticsfalcon_17110:HG2_PB_assemblyticsPBcR_16544:HG2_PB_SVrefine2PB10Xhap12_2197:HG2_PB_SVrefine2Falcon2Bionano_1310:HG2_Ill_svaba_3665:HG2_Ill_scalpel_2870:HG2_Ill_manta_841:HG2_Ill_Krunchall_4099:HG2_Ill_GATKHC_4850:HG2_Ill_GATKHCSBGrefine_1971:HG2_Ill_250bpfermikitraw_4031:HG2_Ill_150bpfermikitraw_3740:HG2_10X_allpass_455:HG2_10X_SVrefine210Xhap12_2251;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2251:HG2_10X_allpass_455:HG2_Ill_150bpfermikitraw_3740:HG2_Ill_250bpfermikitraw_4031:HG2_Ill_GATKHCSBGrefine_1971:HG2_Ill_GATKHC_4850:HG2_Ill_Krunchall_4099:HG2_Ill_manta_841:HG2_Ill_scalpel_2870:HG2_Ill_svaba_3665:HG2_PB_SVrefine2Falcon2Bionano_1310:HG2_PB_SVrefine2PB10Xhap12_2197:HG2_PB_assemblyticsPBcR_16544:HG2_PB_assemblyticsfalcon_17110:HG2_PB_pbsv_2977:HG3_10X_allpass_571:HG3_Ill_150bpfermikitraw_3819:HG3_Ill_250bpfermikitraw_3946:HG3_Ill_GATKHCSBGrefine_1979:HG3_Ill_GATKHC_4957:HG3_Ill_Krunchall_4077:HG3_Ill_SVrefine2DISCOVARDovetail_2175:HG3_Ill_manta_660:HG3_Ill_scalpel_2975:HG3_Ill_svaba_3761:HG3_PB_HySA_4584:HG3_PB_SVrefine2Falcon1Dovetail_1854:HG3_PB_SVrefine2PBcRDovetail_1479:HG4_10X_allpass_532:HG4_Ill_150bpfermikitraw_3914:HG4_Ill_250bpfermikitraw_4067:HG4_Ill_GATKHCSBGrefine_2049:HG4_Ill_GATKHC_4923:HG4_Ill_Krunchall_4282:HG4_Ill_SVrefine2DISCOVARDovetail_2193:HG4_Ill_manta_722:HG4_Ill_scalpel_2794:HG4_Ill_svaba_3746:HG4_PB_SVrefine2Falcon1Dovetail_1795:HG4_PB_SVrefine2PBcRDovetail_1570:HG4_PB_pbsv_2991;NumExactMatchSVs=41;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.133333;PBcalls=16;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=26;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=15;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-59;DistBack=9862;DistForward=19968;DistMin=9862;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=3:1629483-1629543;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:71:1/1:2:34:0:35:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr3	2311586	HG2_Ill_GATKHCSBGrefine_1973	GTTTGTTTGTTTGTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_2951:HG4_PB_assemblyticsfalcon_16759:HG3_PB_assemblyticsfalcon_17056:HG2_PB_assemblyticsfalcon_17122:HG2_PB_assemblyticsPBcR_16559:HG4_Ill_Krunchall_4288:HG3_Ill_Krunchall_4084:HG2_Ill_Krunchall_4105:HG2_10X_allpass_456:HG3_PB_HySA_4600:HG2_PB_HySA_5634:HG4_PB_HySA_4509:HG4_Ill_MetaSV_3263:HG3_Ill_Spiral_3172:HG3_Ill_MetaSV_3302:HG2_Ill_tnscope_312:HG4_PB_pbsv_3000:HG4_PB_SVrefine2PBcRDovetail_1576:HG4_PB_SVrefine2Falcon1Dovetail_1803:HG4_Ill_svaba_3752:HG4_Ill_manta_725:HG4_Ill_SVrefine2DISCOVARDovetail_2198:HG4_Ill_GATKHCSBGrefine_2052:HG4_10X_allpass_534:HG3_PB_SVrefine2PBcRDovetail_1483:HG3_PB_SVrefine2Falcon1Dovetail_1859:HG3_Ill_svaba_3767:HG3_Ill_manta_661:HG3_Ill_SVrefine2DISCOVARDovetail_2181:HG3_Ill_GATKHCSBGrefine_1981:HG3_10X_allpass_572:HG2_PB_pbsv_2986:HG2_PB_SVrefine2PBcRplusDovetail_7221:HG2_PB_SVrefine2PB10Xhap12_2204:HG2_PB_SVrefine2Falcon2Bionano_1317:HG2_PB_SVrefine2Falcon1plusDovetail_7788:HG2_Ill_svaba_3670:HG2_Ill_breakscan11_414:HG2_Ill_SpiralSDKrefine_10719:HG2_Ill_SVrefine2DISCOVARplusDovetail_8266:HG2_Ill_GATKHCSBGrefine_1973:HG2_10X_SVrefine210Xhap12_2258;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2258:HG2_Ill_GATKHCSBGrefine_1973:HG2_Ill_SVrefine2DISCOVARplusDovetail_8266:HG2_Ill_SpiralSDKrefine_10719:HG2_Ill_breakscan11_414:HG2_Ill_svaba_3670:HG2_PB_SVrefine2Falcon1plusDovetail_7788:HG2_PB_SVrefine2Falcon2Bionano_1317:HG2_PB_SVrefine2PB10Xhap12_2204:HG2_PB_SVrefine2PBcRplusDovetail_7221:HG2_PB_pbsv_2986:HG3_10X_allpass_572:HG3_Ill_GATKHCSBGrefine_1981:HG3_Ill_SVrefine2DISCOVARDovetail_2181:HG3_Ill_manta_661:HG3_Ill_svaba_3767:HG3_PB_SVrefine2Falcon1Dovetail_1859:HG3_PB_SVrefine2PBcRDovetail_1483:HG4_10X_allpass_534:HG4_Ill_GATKHCSBGrefine_2052:HG4_Ill_SVrefine2DISCOVARDovetail_2198:HG4_Ill_manta_725:HG4_Ill_svaba_3752:HG4_PB_SVrefine2Falcon1Dovetail_1803:HG4_PB_SVrefine2PBcRDovetail_1576:HG4_PB_pbsv_3000;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0611354;ClusterMaxSizeDiff=0.0611354;ClusterMaxEditDist=0.0611354;PBcalls=18;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-348;DistBack=31166;DistForward=17442;DistMin=17442;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=3:2311587-2311945;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2448.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:77:1/1:1:22:1:27:./.:0:0:0:0:1/1:0:51:./.:1:18:.:.:.
chr3	2430924	HG3_Ill_SVrefine2DISCOVARDovetail_2182	TTTCACCGTGATCTATCTTCACGTGGCTGCAGCCTTCTCATTATGTTGTTCTCGGAGAAACC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2259:HG3_PB_pbsv_2952:HG2_PB_HySA_5637:HG2_PB_pbsv_2987:HG3_PB_HySA_4602:HG3_Ill_GATKHC_4970:HG3_Ill_GATKHCSBGrefine_1982:HG3_Ill_250bpfermikitraw_3956:HG3_Ill_150bpfermikitraw_3831:HG2_Ill_GATKHCSBGrefine_1974:HG2_Ill_250bpfermikitraw_4039:HG4_PB_pbsv_3001:HG4_Ill_svaba_3754:HG4_Ill_Krunchall_4291:HG4_Ill_GATKHCSBGrefine_2053:HG4_Ill_250bpfermikitraw_4074:HG4_Ill_150bpfermikitraw_3920:HG3_Ill_svaba_3769:HG4_PB_SVrefine2Falcon1Dovetail_1804:HG3_PB_SVrefine2PBcRDovetail_1484:HG3_PB_SVrefine2Falcon1Dovetail_1860:HG3_Ill_SVrefine2DISCOVARDovetail_2182:HG2_PB_SVrefine2PB10Xhap12_2205:HG2_Ill_SVrefine2DISCOVARplusDovetail_8267;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2259:HG4_PB_SVrefine2Falcon1Dovetail_1804:HG3_PB_SVrefine2PBcRDovetail_1484:HG3_PB_SVrefine2Falcon1Dovetail_1860:HG3_Ill_SVrefine2DISCOVARDovetail_2182:HG2_PB_SVrefine2PB10Xhap12_2205:HG2_Ill_SVrefine2DISCOVARplusDovetail_8267;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.0983607;PBcalls=9;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-61;DistBack=48527;DistForward=2;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=120;REFWIDENED=3:2430925-2431105;PctSeqSimilarity=0.9792;PctSizeSimilarity=1;PctRecOverlap=0.6452;SizeDiff=0;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=87;MatchId=2449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:38:0|1:29:3:3:32:./.:0:0:0:0:0/1:27:11:./.:.:.:.:.:.
chr3	3022018	HG4_Ill_GATKHCSBGrefine_2056	GCCACCAATAATTTAAAAAGGGCCACAGGTAGGTCAGGACTAACCTGTTCTAAGCCAAGAACAGATTTACATTTTCAATTCTTTTCATCTTACT	G	20	PASS	ClusterIDs=HG2_Ill_Cortex_5389:HG2_PB_pbsv_2991:HG4_PB_pbsv_3004:HG4_Ill_svaba_3762:HG4_Ill_manta_727:HG4_Ill_SVrefine2DISCOVARDovetail_2200:HG4_Ill_Krunchall_4300:HG4_Ill_GATKHC_4943:HG4_Ill_GATKHCSBGrefine_2056:HG4_Ill_250bpfermikitraw_4084:HG4_Ill_150bpfermikitraw_3930:HG4_10X_allpass_535:HG2_PB_SVrefine2Falcon2Bionano_1321:HG2_Ill_svaba_3678:HG2_Ill_scalpel_2882:HG2_Ill_manta_844:HG2_Ill_SpiralSDKrefine_10724:HG2_Ill_Krunchall_4116:HG2_Ill_GATKHC_4872:HG2_Ill_GATKHCSBGrefine_1977:HG2_Ill_250bpfermikitraw_4048:HG2_Ill_150bpfermikitraw_3754:HG2_10X_allpass_457:HG2_10X_SVrefine210Xhap12_2264:HG4_Ill_Cortex_2286;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2264:HG2_10X_allpass_457:HG2_Ill_150bpfermikitraw_3754:HG2_Ill_250bpfermikitraw_4048:HG2_Ill_GATKHCSBGrefine_1977:HG2_Ill_GATKHC_4872:HG2_Ill_Krunchall_4116:HG2_Ill_SpiralSDKrefine_10724:HG2_Ill_manta_844:HG2_Ill_scalpel_2882:HG2_Ill_svaba_3678:HG2_PB_SVrefine2Falcon2Bionano_1321:HG4_10X_allpass_535:HG4_Ill_150bpfermikitraw_3930:HG4_Ill_250bpfermikitraw_4084:HG4_Ill_GATKHCSBGrefine_2056:HG4_Ill_GATKHC_4943:HG4_Ill_Krunchall_4300:HG4_Ill_SVrefine2DISCOVARDovetail_2200:HG4_Ill_manta_727:HG4_Ill_svaba_3762:HG4_PB_pbsv_3004;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0106952;ClusterMaxSizeDiff=0.0106952;ClusterMaxEditDist=0.0336134;PBcalls=3;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-93;DistBack=45899;DistForward=-92;DistMin=-92;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:3022019-3022114;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2450.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:29:./.:27:5:12:23:./.:0:0:0:0:0/1:31:16:./.:.:.:.:.:.
chr3	3873204	HG2_Ill_scalpel_2892	TAAGACTATGACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_417:HG4_10X_allpass_538:HG4_PB_HySA_4538:HG3_PB_assemblyticsfalcon_17080:HG4_Ill_Krunchall_4314:HG3_Ill_Krunchall_4103:HG2_Ill_Krunchall_4130:HG4_PB_assemblyticsfalcon_16778:HG2_PB_assemblyticsPBcR_16578:HG3_PB_HySA_4625:HG2_PB_pbsv_3000:HG2_PB_SVrefine2Falcon1plusDovetail_7794:HG4_Ill_MetaSV_3265:HG3_PB_HySA_4624:HG3_Ill_MetaSV_3305:HG2_PB_HySA_5668:HG2_Ill_tnscope_313:HG4_PB_SVrefine2PBcRDovetail_1582:HG4_PB_SVrefine2Falcon1Dovetail_1809:HG4_Ill_scalpel_2814:HG4_Ill_SVrefine2DISCOVARDovetail_2205:HG4_Ill_GATKHCSBGrefine_2062:HG3_PB_pbsv_2963:HG3_PB_SVrefine2PBcRDovetail_1488:HG3_PB_SVrefine2Falcon1Dovetail_1865:HG3_Ill_SVrefine2DISCOVARDovetail_2187:HG3_Ill_GATKHCSBGrefine_1993:HG3_10X_allpass_574:HG2_PB_assemblyticsfalcon_17139:HG2_PB_SVrefine2PBcRplusDovetail_7231:HG2_PB_SVrefine2PB10Xhap12_2211:HG2_PB_SVrefine2Falcon2Bionano_1326:HG2_Ill_scalpel_2892:HG2_Ill_SVrefine2DISCOVARplusDovetail_8273:HG2_Ill_GATKHCSBGrefine_1982:HG2_10X_allpass_458:HG2_10X_SVrefine210Xhap12_2269:HG4_PB_pbsv_3014;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2269:HG2_10X_allpass_458:HG2_Ill_GATKHCSBGrefine_1982:HG2_Ill_SVrefine2DISCOVARplusDovetail_8273:HG2_Ill_scalpel_2892:HG2_PB_SVrefine2Falcon2Bionano_1326:HG2_PB_SVrefine2PB10Xhap12_2211:HG2_PB_SVrefine2PBcRplusDovetail_7231:HG2_PB_assemblyticsfalcon_17139:HG3_10X_allpass_574:HG3_Ill_GATKHCSBGrefine_1993:HG3_Ill_SVrefine2DISCOVARDovetail_2187:HG3_PB_SVrefine2Falcon1Dovetail_1865:HG3_PB_SVrefine2PBcRDovetail_1488:HG3_PB_pbsv_2963:HG4_Ill_GATKHCSBGrefine_2062:HG4_Ill_SVrefine2DISCOVARDovetail_2205:HG4_Ill_scalpel_2814:HG4_PB_SVrefine2Falcon1Dovetail_1809:HG4_PB_SVrefine2PBcRDovetail_1582;NumExactMatchSVs=20;ClusterMaxShiftDist=0.172767;ClusterMaxSizeDiff=0.172767;ClusterMaxEditDist=0.172767;PBcalls=19;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=30822;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=3:3873205-3873546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:20:0:36:./.:0:0:0:0:1/1:0:48:./.:2:15:.:.:.
chr3	4066924	HG4_Ill_GATKHCSBGrefine_2063	TACAAAATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCACAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCACCACACTGTCTTCCACAATGGTTGAACTAGTTTACACTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAGGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2270:HG2_PB_assemblyticsfalcon_17143:HG4_Ill_Krunchall_4315:HG3_Ill_Krunchall_4107:HG2_PB_pbsv_3001:HG2_Ill_Krunchall_4133:HG4_PB_assemblyticsfalcon_16780:HG2_PB_assemblyticsPBcR_16581:HG2_10X_allpass_459:HG3_10X_allpass_575:HG3_PB_assemblyticsfalcon_17082:HG4_10X_allpass_539:HG3_PB_SVrefine2Falcon1Dovetail_1866:HG2_PB_SVrefine2Falcon1plusDovetail_7795:HG4_PB_pbsv_3015:HG2_Ill_tnscope_314:HG4_PB_SVrefine2PBcRDovetail_1583:HG4_PB_SVrefine2Falcon1Dovetail_1810:HG4_Ill_SVrefine2DISCOVARDovetail_2207:HG4_Ill_MetaSV_3266:HG4_Ill_GATKHCSBGrefine_2063:HG3_PB_pbsv_2964:HG3_PB_SVrefine2PBcRDovetail_1489:HG3_Ill_SVrefine2DISCOVARDovetail_2188:HG3_Ill_MetaSV_3306:HG3_Ill_GATKHCSBGrefine_1994:HG2_PB_SVrefine2PBcRplusDovetail_7232:HG2_PB_SVrefine2PB10Xhap12_2212:HG2_PB_SVrefine2Falcon2Bionano_1327:HG2_Ill_SVrefine2DISCOVARplusDovetail_8274:HG2_Ill_GATKHCSBGrefine_1983;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2270:HG4_PB_SVrefine2PBcRDovetail_1583:HG4_PB_SVrefine2Falcon1Dovetail_1810:HG4_Ill_SVrefine2DISCOVARDovetail_2207:HG4_Ill_MetaSV_3266:HG4_Ill_GATKHCSBGrefine_2063:HG3_PB_pbsv_2964:HG3_PB_SVrefine2PBcRDovetail_1489:HG3_Ill_SVrefine2DISCOVARDovetail_2188:HG3_Ill_MetaSV_3306:HG3_Ill_GATKHCSBGrefine_1994:HG2_PB_SVrefine2PBcRplusDovetail_7232:HG2_PB_SVrefine2PB10Xhap12_2212:HG2_PB_SVrefine2Falcon2Bionano_1327:HG2_Ill_SVrefine2DISCOVARplusDovetail_8274:HG2_Ill_GATKHCSBGrefine_1983;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0106585;ClusterMaxSizeDiff=0.0106585;ClusterMaxEditDist=0.0106585;PBcalls=15;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2631;DistBack=33478;DistForward=36398;DistMin=33478;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=3:4066925-4069568;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2452.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:100:1/1:0:23:0:10:./.:0:0:0:0:1/1:0:44:1/1:3:173:2578:.:.
chr3	5275739	HG4_Ill_SVrefine2DISCOVARDovetail_2211	TAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2280:HG2_PB_HySA_5689:HG4_Ill_scalpel_2824:HG4_Ill_GATKHCSBGrefine_2070:HG4_10X_allpass_540:HG3_Ill_scalpel_3010:HG3_Ill_manta_666:HG3_Ill_GATKHCSBGrefine_1998:HG3_Ill_250bpfermikitraw_3994:HG2_Ill_scalpel_2907:HG2_Ill_GATKHCSBGrefine_1990:HG2_10X_allpass_460:HG4_PB_HySA_4555:HG4_Ill_MetaSV_3270:HG3_PB_HySA_4641:HG3_Ill_MetaSV_3309:HG2_PB_pbsv_3011:HG3_PB_pbsv_2973:HG4_PB_pbsv_3023:HG4_PB_SVrefine2PBcRDovetail_1589:HG4_PB_SVrefine2Falcon1Dovetail_1814:HG4_Ill_SVrefine2DISCOVARDovetail_2211:HG3_PB_SVrefine2PBcRDovetail_1494:HG3_PB_SVrefine2Falcon1Dovetail_1870:HG3_Ill_SVrefine2DISCOVARDovetail_2193:HG2_PB_SVrefine2PBcRplusDovetail_7239:HG2_PB_SVrefine2PB10Xhap12_2219:HG2_PB_SVrefine2Falcon2Bionano_1332:HG2_PB_SVrefine2Falcon1plusDovetail_7801:HG2_Ill_SVrefine2DISCOVARplusDovetail_8282;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2280:HG4_PB_SVrefine2PBcRDovetail_1589:HG4_PB_SVrefine2Falcon1Dovetail_1814:HG4_Ill_SVrefine2DISCOVARDovetail_2211:HG3_PB_SVrefine2PBcRDovetail_1494:HG3_PB_SVrefine2Falcon1Dovetail_1870:HG3_Ill_SVrefine2DISCOVARDovetail_2193:HG2_PB_SVrefine2PBcRplusDovetail_7239:HG2_PB_SVrefine2PB10Xhap12_2219:HG2_PB_SVrefine2Falcon2Bionano_1332:HG2_PB_SVrefine2Falcon1plusDovetail_7801:HG2_Ill_SVrefine2DISCOVARplusDovetail_8282;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0518732;ClusterMaxSizeDiff=0.0518732;ClusterMaxEditDist=0.108883;PBcalls=14;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-170;DistBack=1771;DistForward=-81;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=177;REFWIDENED=3:5275740-5276086;PctSeqSimilarity=0.9278;PctSizeSimilarity=1;PctRecOverlap=0.4795;SizeDiff=0;StartDistance=-89;EndDistance=-89;GTMatch=0;TruScore=80;MatchId=2453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:28:1|0:4:24:22:2:./.:0:0:0:0:./.:37:2:./.:.:.:.:.:.
chr3	6620516	HG4_Ill_GATKHCSBGrefine_2078	GTTCAGCACTATCCATGGGTTTGAGGCACCAACTGGAAGTCCTGAAACATGGCTGTTTCAGTTTTCAGATTGAAAAAAATATTAAATATGGAATTCAGCAGTATCTGTGGGTTTCAGGCACCCACTGTTAGTCTTGAAACATAGCTGTCTCAGTTATCACATTGAAAACAATATTAAATATGGAA	G	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_2220:HG2_PB_pbsv_3021:HG4_PB_pbsv_3032:HG4_PB_HySA_4568:HG4_Ill_GATKHC_4991:HG4_Ill_GATKHCSBGrefine_2078:HG4_Ill_250bpfermikitraw_4130:HG4_Ill_150bpfermikitraw_3967:HG4_10X_allpass_542:HG2_Ill_breakscan11_419:HG2_Ill_GATKHCSBGrefine_1994:HG4_PB_SVrefine2PBcRDovetail_1596;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_1994:HG2_Ill_breakscan11_419:HG4_10X_allpass_542:HG4_Ill_150bpfermikitraw_3967:HG4_Ill_250bpfermikitraw_4130:HG4_Ill_GATKHCSBGrefine_2078:HG4_Ill_GATKHC_4991;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0108108;ClusterMaxSizeDiff=0.0108108;ClusterMaxEditDist=0.0271003;PBcalls=4;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-184;DistBack=14605;DistForward=-185;DistMin=-185;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=275;REFWIDENED=3:6620473-6620931;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2454.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:28:./.:40:22:12:5:./.:0:0:0:0:0/1:38:21:./.:.:.:.:.:.
chr3	6700870	HG2_Ill_manta_850	TTCAAAATCATTGTAGAATGATCCCATTTTTACCTGATTATCTCTTTGTGTTTCTTTCTCATCACTTATTTATTTTATCTTTATTACTCTCTCTCCACCACCCATTCATCTATTCATTCATTTCTCCATAAGAACTGCAATACACAAAAAGACCTATTTGCATATTTGCATAAGCAAGATCTAAAATGATGTAGACAAATGTTAATAAGCTGTCTTGTGGTGAAATTTAGTTTTTCCCTTTCTCTAACTTTTTTGGATTGTTACATATTGCCTGCATTTTTAACCAGTATGATTTATTATTTTAGCATTTTTATCAAAAGAACCTCTTTTTAAAAATTGAGTGATTTCAAACTATATGGATAAATATTTTAAAGATTGAAAATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2287:HG3_Ill_Krunchall_4131:HG2_Ill_Krunchall_4164:HG3_Ill_Spiral_3212:HG2_Ill_Spiral_202:HG4_PB_assemblyticsfalcon_16808:HG4_PB_SVrefine2Falcon1Dovetail_1821:HG3_Ill_scalpel_3019:HG3_Ill_manta_667:HG3_Ill_GATKHCSBGrefine_2003:HG3_10X_allpass_577:HG2_Ill_manta_850:HG2_Ill_breakscan11_420:HG2_Ill_SpiralSDKrefine_10752:HG2_Ill_MetaSV_3154:HG2_Ill_GATKHCSBGrefine_2007:HG2_10X_allpass_462:HG3_Ill_MetaSV_3312:HG2_Ill_tnscope_315:HG2_PB_pbsv_3023:HG3_PB_pbsv_2983:HG3_PB_SVrefine2PBcRDovetail_1500:HG3_Ill_SVrefine2DISCOVARDovetail_2202:HG2_PB_SVrefine2Falcon2Bionano_1340:HG2_PB_SVrefine2Falcon1plusDovetail_7810:HG2_Ill_SVrefine2DISCOVARplusDovetail_8292;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_462:HG2_Ill_GATKHCSBGrefine_2007:HG2_Ill_MetaSV_3154:HG2_Ill_SpiralSDKrefine_10752:HG2_Ill_breakscan11_420:HG2_Ill_manta_850:HG3_10X_allpass_577:HG3_Ill_GATKHCSBGrefine_2003:HG3_Ill_manta_667:HG3_Ill_scalpel_3019:HG4_PB_SVrefine2Falcon1Dovetail_1821:HG4_PB_assemblyticsfalcon_16808;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00520833;ClusterMaxSizeDiff=0.00520833;ClusterMaxEditDist=0.0078329;PBcalls=7;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-383;DistBack=-379;DistForward=-380;DistMin=-380;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=3:6700863-6701257;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:43:0|1:36:3:1:32:./.:0:0:0:0:0/1:51:27:0/1:32:9:.:.:.
chr3	7347024	HG2_Ill_scalpel_2924	TTTTTTCTTTTTTTTTTTTTTTAATTATACTTTAAGTTTTAGGATACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCAGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_3040:HG4_PB_SVrefine2PBcRDovetail_1599:HG3_PB_pbsv_2991:HG4_Ill_Krunchall_4352:HG2_PB_pbsv_3030:HG2_Ill_Krunchall_4170:HG4_Ill_scalpel_2839:HG4_Ill_SVrefine2DISCOVARDovetail_2223:HG4_Ill_MetaSV_3276:HG4_Ill_GATKHCSBGrefine_2096:HG3_Ill_scalpel_3026:HG3_Ill_SVrefine2DISCOVARDovetail_2206:HG3_Ill_GATKHCSBGrefine_2007:HG2_PB_SVrefine2PBcRplusDovetail_7248:HG2_PB_SVrefine2PB10Xhap12_2229:HG2_PB_SVrefine2Falcon2Bionano_1342:HG2_PB_HySA_5722:HG2_Ill_scalpel_2924:HG2_Ill_manta_851:HG2_Ill_SVrefine2DISCOVARplusDovetail_8297:HG2_Ill_MetaSV_3156:HG2_Ill_GATKHCSBGrefine_2010:HG2_10X_SVrefine210Xhap12_2289:HG4_Ill_Spiral_237:HG3_PB_assemblyticsfalcon_17116:HG3_PB_SVrefine2PBcRDovetail_1505:HG3_PB_SVrefine2Falcon1Dovetail_1877:HG3_PB_HySA_4663:HG3_Ill_Spiral_3220:HG3_Ill_MetaSV_3315:HG2_PB_assemblyticsfalcon_17187:HG2_PB_SVrefine2Falcon1plusDovetail_7815:HG2_Ill_tnscope_316:HG2_Ill_Spiral_203:HG2_PB_assemblyticsPBcR_16618:HG2_Ill_breakscan11_421;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2289:HG2_Ill_GATKHCSBGrefine_2010:HG2_Ill_MetaSV_3156:HG2_Ill_SVrefine2DISCOVARplusDovetail_8297:HG2_Ill_manta_851:HG2_Ill_scalpel_2924:HG2_PB_HySA_5722:HG2_PB_SVrefine2Falcon2Bionano_1342:HG2_PB_SVrefine2PB10Xhap12_2229:HG2_PB_SVrefine2PBcRplusDovetail_7248:HG3_Ill_GATKHCSBGrefine_2007:HG3_Ill_SVrefine2DISCOVARDovetail_2206:HG3_Ill_scalpel_3026:HG4_Ill_GATKHCSBGrefine_2096:HG4_Ill_MetaSV_3276:HG4_Ill_SVrefine2DISCOVARDovetail_2223:HG4_Ill_scalpel_2839;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0168067;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.0508475;PBcalls=15;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-298;DistBack=3640;DistForward=2289;DistMin=2289;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=3:7347025-7347327;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:0:23:1:29:./.:0:0:0:0:1/1:0:30:./.:.:.:.:.:.
chr3	7905946	HG4_PB_SVrefine2Falcon1Dovetail_1829	CCTCTTCAAAAGTTGGGTGTGCTACTAGCTACCTGATATGGCCTGGGTATTTGTCCCCTCCAAATCCTATGTTAAAATGTGATCCCCAGTGTTGGAGGTGGAACCTGGTAGGGGGTATTTGGGTCATGGTTGGGGATCCGTCATGATGGTTTGGTGGCCTTTTCATGGTAATGAGTTCAGAGCCTATCAGATTGTTTAAAGGCAA	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3158:HG4_PB_HySA_4580:HG4_Ill_Krunchall_4356:HG3_Ill_Krunchall_4142:HG2_Ill_Krunchall_4173:HG3_PB_assemblyticsfalcon_17120:HG2_PB_HySA_5725:HG4_PB_assemblyticsfalcon_16826:HG2_PB_assemblyticsPBcR_16622:HG4_PB_pbsv_3043:HG4_PB_SVrefine2PBcRDovetail_1600:HG4_PB_SVrefine2Falcon1Dovetail_1829:HG4_Ill_scalpel_2844:HG4_Ill_SVrefine2DISCOVARDovetail_2227:HG4_Ill_GATKHCSBGrefine_2101:HG4_10X_allpass_547:HG3_PB_pbsv_2995:HG3_PB_SVrefine2Falcon1Dovetail_1879:HG3_Ill_scalpel_3036:HG3_Ill_MetaSV_3317:HG3_Ill_GATKHCSBGrefine_2011:HG3_10X_allpass_578:HG2_PB_pbsv_3034:HG2_PB_assemblyticsfalcon_17192:HG2_PB_SVrefine2PBcRplusDovetail_7251:HG2_PB_SVrefine2PB10Xhap12_2231:HG2_PB_SVrefine2Falcon2Bionano_1344:HG2_PB_SVrefine2Falcon1plusDovetail_7818:HG2_Ill_scalpel_2927:HG2_Ill_manta_853:HG2_Ill_SpiralSDKrefine_10757:HG2_Ill_SVrefine2DISCOVARplusDovetail_8300:HG2_Ill_GATKHCSBGrefine_2014:HG2_10X_SVrefine210Xhap12_2293:HG2_Ill_breakscan11_422:HG4_Ill_MetaSV_3280;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2293:HG2_Ill_GATKHCSBGrefine_2014:HG2_Ill_SVrefine2DISCOVARplusDovetail_8300:HG2_Ill_SpiralSDKrefine_10757:HG2_Ill_manta_853:HG2_Ill_scalpel_2927:HG2_PB_SVrefine2Falcon1plusDovetail_7818:HG2_PB_SVrefine2Falcon2Bionano_1344:HG2_PB_SVrefine2PB10Xhap12_2231:HG2_PB_SVrefine2PBcRplusDovetail_7251:HG2_PB_assemblyticsfalcon_17192:HG2_PB_pbsv_3034:HG3_10X_allpass_578:HG3_Ill_GATKHCSBGrefine_2011:HG3_Ill_MetaSV_3317:HG3_Ill_scalpel_3036:HG3_PB_SVrefine2Falcon1Dovetail_1879:HG3_PB_pbsv_2995:HG4_10X_allpass_547:HG4_Ill_GATKHCSBGrefine_2101:HG4_Ill_SVrefine2DISCOVARDovetail_2227:HG4_Ill_scalpel_2844:HG4_PB_SVrefine2Falcon1Dovetail_1829:HG4_PB_SVrefine2PBcRDovetail_1600:HG4_PB_pbsv_3043;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0146699;ClusterMaxSizeDiff=0.0146699;ClusterMaxEditDist=0.0146699;PBcalls=16;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-204;DistBack=61953;DistForward=-203;DistMin=-203;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=3:7905947-7906152;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:58:./.:0:0:0:0:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr3	8325638	HG2_PB_SVrefine2Falcon2Bionano_1347	AATCACAGAGTCTTTCAGATGAATCCAAAAATGTCTCTCTTCCTACACTAGGGTGAAATAATGGTGAGGCATTAGTGGTACAAGCAAATTACTGTGGTTCACCTCATATTTCTGTTGTCTAAGCTTTGTCATTATTAGGGAGATGAATTTGTGCCAATCCATTCCTAAATCTCACTTGGTCTCACCTGGAACCAGTGATATTTATTTACCAGCAAGTAATCGGGACATAATTTCCATGTGTGGCTATCACGAATCTGAGACTCAAATTTACCATTCACCAAAAATTTTTATTGAACACCAACCAGGTACAAAGATTTATTCTAGAGATTTAGAGGGCACAAGAGTGATAAATGTTCTGTCCTTTAGAAACTGTTATTCTAAAAGGAGAAAGAGAAAAAGTGCCTAAGTATGCTAAAACAAAAATAAGTGCCCTTAGAGGTAAGAAGAAGGAGTGATAAAGCAAAGATCAAATCTGTGGACGTGAACTGGGTTTGACTCTCAGTCTACATGTATCAGTCAGCTAAGCTACTACTGCAACAATACTGTGTAACAGGCATCCTTGAAAGTTTCATAGTTTACAATAATAAACATTAATCTCACTCTGCAGGAGCCAAATGTGCTTTGACTGATCTAGACTGTGCTCTTTTTAGACTCCTGGACTTGGCTCTAGATTGTGGCTTGGATTCATGACTTCTCCACATATTACTCACCTTCTTGGGCCAGTAACCACCTGAGACATATTCTTCTCATTGCAAAAGAAAGGCAAATGACCTCAGACTTTGGCCACATAAGCCCCTGTATTTTAAGAATGATTCAGGAAAGAGTTTCTTCATAGAAAAGACCATTTAAGAAAGCTATAGTTTCTGAACAGCAAGAATAATACGCATGTGAAAGCAGGTAAAACCCTCTACAGCCCCTACGTCTCTTTCTTTCTCTCTTGGAATTTATTCTGGTGGTAAAATCAATGTTAAAATAACTACTACAACGATTGTGACAATGGCATAATAGTTTGAAAATGTATGTTGGTATTATAAGGTTGATGACCTTTCCAGGATGAATTTTGCTTCACGAAGTTCTTTAAAAGGTTTTGAGGGTATGAATTGCTTAGGGACATAATTTGAGATAAGGTAGGGAAAGTAAAAATATTATAGGGACAAAACGTCCTAAACTCTGG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3159:HG2_10X_allpass_463:HG4_PB_pbsv_3047:HG4_Ill_Krunchall_4364:HG2_Ill_Krunchall_4182:HG4_PB_assemblyticsfalcon_16830:HG2_PB_assemblyticsPBcR_16629:HG4_PB_SVrefine2PBcRDovetail_1602:HG4_PB_SVrefine2Falcon1Dovetail_1830:HG4_Ill_MetaSV_3281:HG4_10X_allpass_548:HG2_PB_assemblyticsfalcon_17198:HG2_PB_SVrefine2PBcRplusDovetail_7253:HG2_PB_SVrefine2PB10Xhap12_2234:HG2_PB_SVrefine2Falcon2Bionano_1347:HG2_PB_SVrefine2Falcon1plusDovetail_7822:HG2_Ill_SpiralSDKrefine_10763:HG2_Ill_SVrefine2DISCOVARplusDovetail_8303:HG2_10X_SVrefine210Xhap12_2296:HG2_Ill_tnscope_317:HG2_PB_pbsv_3040;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2296:HG2_Ill_SVrefine2DISCOVARplusDovetail_8303:HG2_Ill_SpiralSDKrefine_10763:HG2_PB_SVrefine2Falcon1plusDovetail_7822:HG2_PB_SVrefine2Falcon2Bionano_1347:HG2_PB_SVrefine2PB10Xhap12_2234:HG2_PB_SVrefine2PBcRplusDovetail_7253:HG2_PB_assemblyticsfalcon_17198:HG4_10X_allpass_548:HG4_Ill_MetaSV_3281:HG4_PB_SVrefine2Falcon1Dovetail_1830:HG4_PB_SVrefine2PBcRDovetail_1602;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0411246;ClusterMaxSizeDiff=0.0411246;ClusterMaxEditDist=0.0411246;PBcalls=11;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1173;DistBack=26209;DistForward=-1173;DistMin=-1173;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:8325639-8326812;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:68:40:0|1:59:0:1:29:./.:0:0:0:0:0/1:55:21:0/1:92:39:.:.:.
chr3	8720136	HG3_Ill_SVrefine2DISCOVARDovetail_2213	GCCTCTATCCCCCCCTGGCTCTTAGGACCCCCATTGCAAGGGGGTGAGGCACCCCCCGCGAGGCGGGGACTGAGAGCCAGCCCCTCTTCCCTCCATGGCTCTTAGGACCCCAATCACAGAGGGGGGAACACCCCCCGCGAGGCAGGGACTGAGAGCCAGCCCTTCTTCCCCCCCGGCTTTTGGGACCCCCATCGCAGTGGGGGGAGGCACCCCCCGCGAGGCGGGGATTGAGAGCCAGCCACTCTTCCCCTCCTGGGTCTTAGGACCCCCAACGTGGGGGGGGGAGGCACCACACGCGAGGCGGGGAAAGAGAGCCAGCCCCTCTTCCCTCCCTGCCACTTAGGACCCCATCGCAGGGAGAGGAGGCGGCACTCCCCACGAGGCGGGGACTGAGAACCAATCCCTCTTCCCCCAGCCTGGCTCTTAGGATCCCCATTGCAAGGGAGGGAGGCACCCCCCGCCAGGCGGGGACTGAGAGCCAGCCACTCTTCCCCTCCTGGCTCTTGGGACGCCCATCGCAGGGCGGAGAGTCACCCCCCGCGAGGTGGGGACTGAGAGCCAGCCCCTCTTCCCCCCCTGGCTCTTAGGACACCAAACGCAGGGGAGGAAGCACCCCCCGCGAGGCGGGGACTGAGAGCAAGCACCTCTTTCCCCCCTGGCTCTTAGGACCCAAATTGCGGGGGGGAGGCACCCCCGCGAGGCGGGGACTGAGAGGCAGCCGCTGTTCCCCCACACTGGCTCTTGGGACCCCCATCGCAGGGGGGATGGCACCCTCCGTGAGCGGGGACTGAGAGCCAGCCAATTTTCCCCCTGGCTTTTAGGACCCCCATCGGAGGGGGGGAGCCACCCCCCATGAGGCGGGGACTAAGAGCCAGCC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2298:HG4_PB_pbsv_3054:HG4_10X_allpass_549:HG3_10X_allpass_579:HG2_10X_allpass_464:HG4_PB_HySA_4587:HG2_PB_HySA_5741:HG3_PB_pbsv_3007:HG2_Ill_MetaSV_3160:HG4_Ill_manta_733:HG4_Ill_GATKHCSBGrefine_2106:HG3_Ill_manta_670:HG3_Ill_GATKHCSBGrefine_2016:HG2_Ill_SpiralSDKrefine_10766:HG2_Ill_GATKHCSBGrefine_2021:HG2_Ill_breakscan11_424:HG4_Ill_MetaSV_3283:HG3_Ill_MetaSV_3318:HG2_PB_pbsv_3047:HG4_PB_pbsv_3053:HG4_PB_SVrefine2PBcRDovetail_1606:HG4_PB_SVrefine2Falcon1Dovetail_1833:HG3_PB_SVrefine2PBcRDovetail_1509:HG3_PB_SVrefine2Falcon1Dovetail_1884:HG3_Ill_SVrefine2DISCOVARDovetail_2213:HG2_PB_SVrefine2PBcRplusDovetail_7257:HG2_PB_SVrefine2PB10Xhap12_2239:HG2_PB_SVrefine2Falcon2Bionano_1351:HG2_PB_SVrefine2Falcon1plusDovetail_7825:HG2_Ill_SVrefine2DISCOVARplusDovetail_8305;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8305:HG2_PB_SVrefine2Falcon1plusDovetail_7825:HG2_PB_SVrefine2Falcon2Bionano_1351:HG2_PB_SVrefine2PB10Xhap12_2239:HG2_PB_SVrefine2PBcRplusDovetail_7257:HG3_Ill_SVrefine2DISCOVARDovetail_2213:HG3_PB_SVrefine2Falcon1Dovetail_1884:HG3_PB_SVrefine2PBcRDovetail_1509:HG4_PB_SVrefine2Falcon1Dovetail_1833:HG4_PB_SVrefine2PBcRDovetail_1606;NumExactMatchSVs=10;ClusterMaxShiftDist=0.280682;ClusterMaxSizeDiff=0.280682;ClusterMaxEditDist=0.280682;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-876;DistBack=22968;DistForward=-525;DistMin=-525;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=353;REFWIDENED=3:8720137-8721365;PctSeqSimilarity=0.9662;PctSizeSimilarity=1;PctRecOverlap=0.9726;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=97;MatchId=2459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:2:14:0:27:./.:0:0:0:0:1/1:1:20:0/1:12:40:.:.:.
chr3	10549594	HG2_Ill_GATKHCSBGrefine_2028	AAGCCCAGGGCTGCCTGCATGCGCAGGCCATCATGAGTGTGGGCTCACTGGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2304:HG3_PB_HySA_4685:HG2_Ill_Spiral_206:HG3_PB_pbsv_3013:HG3_PB_SVrefine2PBcRDovetail_1516:HG3_Ill_svaba_3847:HG3_Ill_scalpel_3048:HG3_Ill_manta_672:HG3_Ill_SVrefine2DISCOVARDovetail_2221:HG3_Ill_Krunchall_4158:HG3_Ill_GATKHC_5054:HG3_Ill_GATKHCSBGrefine_2020:HG3_Ill_Cortex_2325:HG3_Ill_250bpfermikitraw_4040:HG3_Ill_150bpfermikitraw_3906:HG3_10X_allpass_581:HG2_PB_pbsv_3056:HG2_Ill_svaba_3747:HG2_Ill_scalpel_2939:HG2_Ill_manta_856:HG2_Ill_breakscan11_425:HG2_Ill_SpiralSDKrefine_10773:HG2_Ill_SVrefine2DISCOVARplusDovetail_8313:HG2_Ill_Krunchall_4192:HG2_Ill_GATKHC_4958:HG2_Ill_GATKHCSBGrefine_2028:HG2_Ill_Cortex_5433:HG2_Ill_250bpfermikitraw_4128:HG2_Ill_150bpfermikitraw_3826:HG2_10X_allpass_465;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2304:HG3_PB_pbsv_3013:HG3_PB_SVrefine2PBcRDovetail_1516:HG3_Ill_svaba_3847:HG3_Ill_scalpel_3048:HG3_Ill_manta_672:HG3_Ill_SVrefine2DISCOVARDovetail_2221:HG3_Ill_Krunchall_4158:HG3_Ill_GATKHC_5054:HG3_Ill_GATKHCSBGrefine_2020:HG3_Ill_Cortex_2325:HG3_Ill_250bpfermikitraw_4040:HG3_Ill_150bpfermikitraw_3906:HG3_10X_allpass_581:HG2_PB_pbsv_3056:HG2_Ill_svaba_3747:HG2_Ill_scalpel_2939:HG2_Ill_manta_856:HG2_Ill_breakscan11_425:HG2_Ill_SpiralSDKrefine_10773:HG2_Ill_SVrefine2DISCOVARplusDovetail_8313:HG2_Ill_Krunchall_4192:HG2_Ill_GATKHC_4958:HG2_Ill_GATKHCSBGrefine_2028:HG2_Ill_Cortex_5433:HG2_Ill_250bpfermikitraw_4128:HG2_Ill_150bpfermikitraw_3826:HG2_10X_allpass_465;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0190476;PBcalls=4;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=22;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=2112;DistForward=79336;DistMin=2112;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=3:10549595-10549650;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:27:0|1:34:2:1:25:./.:0:0:0:0:0/1:29:27:./.:.:.:.:.:.
chr3	10821757	HG3_Ill_scalpel_3049	TGGGGAGCCTGAGGCCCTTGAGTCTTTGGTGAGTGCTCTGTATGACCCAGCGAGTGAGGTCACCCTCTCTCTCTCTCCCCATCCTCCTTCCTCTCTCACTTGAAAGCACTCTTTGGTGCTCACTCAACACGGTCCCTGTTGGTCATCTCACCCACTTCCTCGGC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_3014:HG3_Ill_MetaSV_3322:HG2_PB_HySA_5761:HG2_Ill_MetaSV_3164:HG3_PB_SVrefine2PBcRDovetail_1517:HG3_Ill_svaba_3848:HG3_Ill_scalpel_3049:HG3_Ill_SVrefine2DISCOVARDovetail_2222:HG3_Ill_GATKHCSBGrefine_2021:HG3_Ill_Cortex_2326:HG3_Ill_250bpfermikitraw_4041:HG3_Ill_150bpfermikitraw_3907:HG3_CG_vcfBeta_1704:HG2_PB_pbsv_3057:HG2_PB_assemblyticsfalcon_17220:HG2_PB_SVrefine2PBcRplusDovetail_7264:HG2_PB_SVrefine2PB10Xhap12_2247:HG2_PB_SVrefine2Falcon1plusDovetail_7832:HG2_Ill_svaba_3749:HG2_Ill_breakscan11_426:HG2_Ill_SpiralSDKrefine_10774:HG2_Ill_GATKHCSBGrefine_2029:HG2_Ill_Cortex_5434:HG2_10X_SVrefine210Xhap12_2305:HG2_PB_assemblyticsPBcR_16648:HG2_PB_SVrefine2PB10Xhap12_2246:HG3_Ill_Krunchall_4159:HG2_Ill_Krunchall_4194;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2305:HG2_Ill_Cortex_5434:HG2_Ill_GATKHCSBGrefine_2029:HG2_Ill_SpiralSDKrefine_10774:HG2_Ill_breakscan11_426:HG2_Ill_svaba_3749:HG2_PB_SVrefine2Falcon1plusDovetail_7832:HG2_PB_SVrefine2PB10Xhap12_2247:HG2_PB_SVrefine2PBcRplusDovetail_7264:HG2_PB_assemblyticsfalcon_17220:HG2_PB_pbsv_3057:HG3_CG_vcfBeta_1704:HG3_Ill_150bpfermikitraw_3907:HG3_Ill_250bpfermikitraw_4041:HG3_Ill_Cortex_2326:HG3_Ill_GATKHCSBGrefine_2021:HG3_Ill_SVrefine2DISCOVARDovetail_2222:HG3_Ill_scalpel_3049:HG3_Ill_svaba_3848:HG3_PB_SVrefine2PBcRDovetail_1517;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0483384;ClusterMaxSizeDiff=0.0483384;ClusterMaxEditDist=0.0484848;PBcalls=10;Illcalls=16;TenXcalls=1;CGcalls=1;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=1;HG2count=16;HG3count=12;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-163;DistBack=32084;DistForward=31558;DistMin=31558;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2956;REFWIDENED=3:10818802-10831830;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2461.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:./.:3:19:23:8:./.:0:0:0:0:0/1:44:13:./.:.:.:.:.:.
chr3	11614714	HG3_Ill_svaba_3853	AAATAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_3071:HG2_Ill_Krunchall_4199:HG4_PB_HySA_4611:HG3_PB_HySA_4693:HG2_Ill_GATKHC_4963:HG2_PB_HySA_5766:HG4_Ill_GATKHC_5030:HG4_Ill_GATKHCSBGrefine_2112:HG3_PB_assemblyticsfalcon_17155:HG3_Ill_GATKHC_5059:HG3_Ill_GATKHCSBGrefine_2024:HG4_PB_assemblyticsfalcon_16856:HG2_Ill_GATKHCSBGrefine_2030:HG4_Ill_manta_735:HG3_Ill_manta_673:HG2_PB_assemblyticsPBcR_16655:HG2_Ill_manta_858:HG3_PB_pbsv_3019:HG4_Ill_svaba_3837:HG4_Ill_250bpfermikitraw_4163:HG3_Ill_svaba_3853:HG2_Ill_svaba_3754:HG2_Ill_Krunchall_4198:HG2_Ill_250bpfermikitraw_4135:HG2_Ill_150bpfermikitraw_3829:HG2_PB_assemblyticsfalcon_17226:HG2_PB_pbsv_3063:HG4_Ill_svaba_3836:HG3_Ill_svaba_3852:HG3_Ill_250bpfermikitraw_4047:HG2_Ill_svaba_3753:HG2_Ill_Krunchall_4197:HG2_Ill_250bpfermikitraw_4134:HG4_Ill_svaba_3835:HG4_Ill_Krunchall_4383:HG4_Ill_250bpfermikitraw_4162:HG3_Ill_svaba_3851:HG3_Ill_Krunchall_4163:HG3_Ill_250bpfermikitraw_4046:HG2_Ill_svaba_3752;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_3829:HG2_Ill_250bpfermikitraw_4135:HG2_Ill_Krunchall_4198:HG2_Ill_svaba_3754:HG3_Ill_svaba_3853:HG4_Ill_250bpfermikitraw_4163:HG4_Ill_svaba_3837;NumExactMatchSVs=7;ClusterMaxShiftDist=0.278146;ClusterMaxSizeDiff=0.278146;ClusterMaxEditDist=0.278146;PBcalls=10;Illcalls=30;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=-76;DistBack=19950;DistForward=26270;DistMin=19950;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=156;REFWIDENED=3:11614641-11614872;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2462.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:50:1/1:4:22:2:15:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr3	12196517	HG4_PB_SVrefine2Falcon1Dovetail_1849	CTCCTTTTCACCTTTCAGACGAGATCGGGCGCGTTCAGGGTGGTATGGCCGTAGAT	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_428:HG4_PB_HySA_4615:HG2_PB_HySA_5773:HG4_PB_pbsv_3080:HG2_PB_pbsv_3073:HG3_PB_pbsv_3027:HG3_PB_HySA_4697:HG4_PB_SVrefine2PBcRDovetail_1624:HG4_PB_SVrefine2Falcon1Dovetail_1849:HG4_Ill_svaba_3841:HG4_Ill_scalpel_2861:HG4_Ill_manta_737:HG4_Ill_SVrefine2DISCOVARDovetail_2250:HG4_Ill_Krunchall_4388:HG4_Ill_GATKHC_5038:HG4_Ill_GATKHCSBGrefine_2115:HG4_Ill_250bpfermikitraw_4172:HG4_Ill_150bpfermikitraw_4001:HG4_CG_vcfBeta_1993:HG4_10X_allpass_552:HG3_PB_SVrefine2PBcRDovetail_1528:HG3_PB_SVrefine2Falcon1Dovetail_1901:HG3_Ill_svaba_3858:HG3_Ill_scalpel_3054:HG3_Ill_manta_675:HG3_Ill_SVrefine2DISCOVARDovetail_2231:HG3_Ill_Krunchall_4168:HG3_Ill_GATKHC_5064:HG3_Ill_GATKHCSBGrefine_2027:HG3_Ill_250bpfermikitraw_4054:HG3_Ill_150bpfermikitraw_3916:HG3_CG_vcfBeta_1707:HG3_10X_allpass_582:HG2_PB_SVrefine2PBcRplusDovetail_7274:HG2_PB_SVrefine2PB10Xhap12_2257:HG2_PB_SVrefine2Falcon2Bionano_1367:HG2_PB_SVrefine2Falcon1plusDovetail_7843:HG2_Ill_svaba_3758:HG2_Ill_scalpel_2946:HG2_Ill_manta_861:HG2_Ill_SpiralSDKrefine_10779:HG2_Ill_SVrefine2DISCOVARplusDovetail_8321:HG2_Ill_Krunchall_4205:HG2_Ill_GATKHC_4971:HG2_Ill_GATKHCSBGrefine_2037:HG2_Ill_250bpfermikitraw_4142:HG2_Ill_150bpfermikitraw_3834:HG2_CG_vcfBeta_1818:HG2_10X_SVrefine210Xhap12_2315;NumClusterSVs=49;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2315:HG2_CG_vcfBeta_1818:HG2_Ill_150bpfermikitraw_3834:HG2_Ill_250bpfermikitraw_4142:HG2_Ill_GATKHCSBGrefine_2037:HG2_Ill_GATKHC_4971:HG2_Ill_Krunchall_4205:HG2_Ill_SVrefine2DISCOVARplusDovetail_8321:HG2_Ill_SpiralSDKrefine_10779:HG2_Ill_manta_861:HG2_Ill_scalpel_2946:HG2_Ill_svaba_3758:HG2_PB_SVrefine2Falcon1plusDovetail_7843:HG2_PB_SVrefine2Falcon2Bionano_1367:HG2_PB_SVrefine2PB10Xhap12_2257:HG2_PB_SVrefine2PBcRplusDovetail_7274:HG3_10X_allpass_582:HG3_CG_vcfBeta_1707:HG3_Ill_150bpfermikitraw_3916:HG3_Ill_250bpfermikitraw_4054:HG3_Ill_GATKHCSBGrefine_2027:HG3_Ill_GATKHC_5064:HG3_Ill_Krunchall_4168:HG3_Ill_SVrefine2DISCOVARDovetail_2231:HG3_Ill_manta_675:HG3_Ill_scalpel_3054:HG3_Ill_svaba_3858:HG3_PB_SVrefine2Falcon1Dovetail_1901:HG3_PB_SVrefine2PBcRDovetail_1528:HG4_10X_allpass_552:HG4_CG_vcfBeta_1993:HG4_Ill_150bpfermikitraw_4001:HG4_Ill_250bpfermikitraw_4172:HG4_Ill_GATKHCSBGrefine_2115:HG4_Ill_GATKHC_5038:HG4_Ill_Krunchall_4388:HG4_Ill_SVrefine2DISCOVARDovetail_2250:HG4_Ill_manta_737:HG4_Ill_scalpel_2861:HG4_Ill_svaba_3841:HG4_PB_SVrefine2Falcon1Dovetail_1849:HG4_PB_SVrefine2PBcRDovetail_1624;NumExactMatchSVs=42;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.0363636;PBcalls=14;Illcalls=29;TenXcalls=3;CGcalls=3;PBexactcalls=8;Illexactcalls=28;TenXexactcalls=3;CGexactcalls=3;HG2count=19;HG3count=15;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-55;DistBack=92;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:12196518-12196588;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:0:9:1:9:./.:0:0:0:0:1/1:0:45:./.:.:.:.:.:.
chr3	14196295	HG3_Ill_svaba_3873	TAATATTTATAAATATTATAAATTTATTTATATATATAAATATATATAATTTATAAATATTATAAATTATTATAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_3038:HG4_Ill_manta_740:HG2_Ill_manta_864:HG2_Ill_SpiralSDKrefine_10790:HG4_CG_vcfBeta_2006:HG3_CG_vcfBeta_1717:HG2_PB_PB10Xdip_19967:HG2_PB_PB10Xdip_19966:HG2_CG_vcfBeta_1829:HG4_Ill_Spiral_242:HG3_Ill_Spiral_3265:HG2_Ill_Spiral_207:HG4_PB_pbsv_3088:HG4_Ill_svaba_3857:HG4_Ill_scalpel_2874:HG4_Ill_Krunchall_4404:HG4_Ill_GATKHC_5058:HG4_Ill_GATKHCSBGrefine_2126:HG4_Ill_250bpfermikitraw_4189:HG4_Ill_150bpfermikitraw_4018:HG4_10X_allpass_553:HG3_PB_assemblyticsfalcon_17180:HG3_Ill_svaba_3873:HG3_Ill_scalpel_3069:HG3_Ill_Krunchall_4189:HG3_Ill_GATKHC_5085:HG3_Ill_GATKHCSBGrefine_2038:HG3_Ill_250bpfermikitraw_4069:HG3_Ill_150bpfermikitraw_3934:HG3_10X_allpass_583:HG2_PB_assemblyticsfalcon_17257:HG2_Ill_svaba_3772:HG2_Ill_scalpel_2960:HG2_Ill_Krunchall_4216:HG2_Ill_GATKHC_4992:HG2_Ill_GATKHCSBGrefine_2046:HG2_Ill_250bpfermikitraw_4160:HG2_10X_allpass_467:HG2_PB_assemblyticsPBcR_16684:HG3_PB_HySA_4710:HG2_PB_HySA_5799:HG4_PB_assemblyticsfalcon_16880:HG2_PB_pbsv_3082;NumClusterSVs=43;ExactMatchIDs=HG2_10X_allpass_467:HG2_Ill_250bpfermikitraw_4160:HG2_Ill_GATKHCSBGrefine_2046:HG2_Ill_GATKHC_4992:HG2_Ill_Krunchall_4216:HG2_Ill_scalpel_2960:HG2_Ill_svaba_3772:HG2_PB_assemblyticsfalcon_17257:HG3_10X_allpass_583:HG3_Ill_150bpfermikitraw_3934:HG3_Ill_250bpfermikitraw_4069:HG3_Ill_GATKHCSBGrefine_2038:HG3_Ill_GATKHC_5085:HG3_Ill_Krunchall_4189:HG3_Ill_scalpel_3069:HG3_Ill_svaba_3873:HG3_PB_assemblyticsfalcon_17180:HG4_10X_allpass_553:HG4_Ill_150bpfermikitraw_4018:HG4_Ill_250bpfermikitraw_4189:HG4_Ill_GATKHCSBGrefine_2126:HG4_Ill_GATKHC_5058:HG4_Ill_Krunchall_4404:HG4_Ill_scalpel_2874:HG4_Ill_svaba_3857:HG4_PB_pbsv_3088;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.113924;PBcalls=11;Illcalls=26;TenXcalls=3;CGcalls=3;PBexactcalls=3;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=13;NumTechs=4;NumTechsExact=3;SVLEN=-78;DistBack=182171;DistForward=62388;DistMin=62388;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:14196294-14196374;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9873;PctRecOverlap=0.975;SizeDiff=-1;StartDistance=2;EndDistance=1;GTMatch=0;TruScore=98;MatchId=2464.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:57:0|1:28:6:0:48:./.:0:0:0:0:0/1:35:14:./.:.:.:.:.:.
chr3	15634392	HG3_PB_SVrefine2Falcon1Dovetail_1907	CATGTGTGCGTGTATACACATGTACGCACATGTGTGCGTGTATACACATGTACGCACATGTGTGCGTGTATACACATGTACGCACATGTGTGCGTGTATACACATGTACGCACATGTGTGCGTGTATACACATGTACGCAT	C	10	PASS	ClusterIDs=HG2_PB_pbsv_3085:HG4_PB_assemblyticsfalcon_16894:HG4_PB_SVrefine2PBcRDovetail_1633:HG4_PB_SVrefine2Falcon1Dovetail_1855:HG3_PB_assemblyticsfalcon_17188:HG3_PB_SVrefine2Falcon1Dovetail_1907:HG4_PB_pbsv_3092:HG2_PB_SVrefine2Falcon2Bionano_1373:HG2_PB_SVrefine2Falcon1plusDovetail_7850:HG3_PB_pbsv_3044;NumClusterSVs=10;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_1907:HG3_PB_assemblyticsfalcon_17188:HG4_PB_SVrefine2Falcon1Dovetail_1855:HG4_PB_SVrefine2PBcRDovetail_1633:HG4_PB_assemblyticsfalcon_16894;NumExactMatchSVs=5;ClusterMaxShiftDist=0.229249;ClusterMaxSizeDiff=0.229249;ClusterMaxEditDist=0.229249;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-140;DistBack=-13;DistForward=-139;DistMin=-139;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=359;REFWIDENED=3:15634066-15634536;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:36:1|0:4:25:36:1:./.:0:0:0:0:1/1:0:14:./.:.:.:.:.:.
chr3	15909988	HG2_10X_allpass_468	CATAGAAATAGAAAACAATCCTAAAATTTGTTTTATAGAAATATATATAAAACAAATATATTTCTTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2328:HG3_PB_HySA_4724:HG3_PB_pbsv_3048:HG2_PB_pbsv_3089:HG2_PB_HySA_5811:HG4_Ill_svaba_3871:HG3_Ill_svaba_3886:HG3_Ill_manta_680:HG3_Ill_Krunchall_4200:HG3_Ill_GATKHC_5098:HG3_Ill_GATKHCSBGrefine_2041:HG3_Ill_250bpfermikitraw_4081:HG3_Ill_150bpfermikitraw_3946:HG3_10X_allpass_584:HG2_Ill_svaba_3782:HG2_Ill_manta_866:HG2_Ill_breakscan11_430:HG2_Ill_SpiralSDKrefine_10799:HG2_Ill_Krunchall_4228:HG2_Ill_GATKHC_5003:HG2_Ill_GATKHCSBGrefine_2050:HG2_Ill_250bpfermikitraw_4171:HG2_Ill_150bpfermikitraw_3857:HG2_10X_allpass_468:HG3_PB_SVrefine2PBcRDovetail_1534:HG3_Ill_SVrefine2DISCOVARDovetail_2249:HG2_PB_SVrefine2PB10Xhap12_2267:HG2_PB_SVrefine2Falcon2Bionano_1376:HG2_PB_SVrefine2Falcon1plusDovetail_7853;NumClusterSVs=29;ExactMatchIDs=HG2_10X_allpass_468:HG2_Ill_150bpfermikitraw_3857:HG2_Ill_250bpfermikitraw_4171:HG2_Ill_GATKHCSBGrefine_2050:HG2_Ill_GATKHC_5003:HG2_Ill_Krunchall_4228:HG2_Ill_SpiralSDKrefine_10799:HG2_Ill_breakscan11_430:HG2_Ill_manta_866:HG2_Ill_svaba_3782:HG3_10X_allpass_584:HG3_Ill_150bpfermikitraw_3946:HG3_Ill_250bpfermikitraw_4081:HG3_Ill_GATKHCSBGrefine_2041:HG3_Ill_GATKHC_5098:HG3_Ill_Krunchall_4200:HG3_Ill_manta_680:HG3_Ill_svaba_3886:HG4_Ill_svaba_3871;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.030303;PBcalls=8;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-66;DistBack=15371;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=32;REFWIDENED=3:15909983-15910080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2466.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:31:./.:10:17:9:10:./.:0:0:0:0:0/1:45:26:./.:.:.:.:.:.
chr3	16449826	HG2_PB_SVrefine2PB10Xhap12_2270	CTCACTAGTTCGGCTGTTTTATTCTCTGTATCCCAGCATCTAGTACATTCCTGGCTCAAAGCTGACAGCTGACAATATTTATTAACAAATTCCCTAATTGGCTGATTGGACCTCAAATCACAATCACCTGTATGGGGTGGGGAATTGTCGATTACTAGGGAACACTGGGTAAGAGAGAACAAGATAAGCATCAAGCAGTGAACTCAGCCCCAGTTTGGGGCTAGGACATTCCTTCTGTAGTAAATATCATATTAAAACTCAAGTAGACCCTACAGTTAGGCACAAAACCTCATATGGT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8335:HG2_PB_pbsv_3093:HG2_PB_HySA_5812:HG4_PB_pbsv_3097:HG4_Ill_GATKHCSBGrefine_2136:HG2_Ill_SpiralSDKrefine_10805:HG2_Ill_GATKHCSBGrefine_2054:HG2_10X_allpass_469:HG4_PB_HySA_4656:HG4_PB_SVrefine2PBcRDovetail_1639:HG4_Ill_SVrefine2DISCOVARDovetail_2268:HG3_PB_SVrefine2Falcon1Dovetail_1912:HG2_PB_SVrefine2PB10Xhap12_2270:HG2_PB_SVrefine2Falcon2Bionano_1379;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8335:HG4_PB_SVrefine2PBcRDovetail_1639:HG4_Ill_SVrefine2DISCOVARDovetail_2268:HG3_PB_SVrefine2Falcon1Dovetail_1912:HG2_PB_SVrefine2PB10Xhap12_2270:HG2_PB_SVrefine2Falcon2Bionano_1379;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0100167;ClusterMaxSizeDiff=0.0100167;ClusterMaxEditDist=0.0302013;PBcalls=8;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-297;DistBack=3903;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=298;REFWIDENED=3:16449827-16450421;PctSeqSimilarity=0.9858;PctSizeSimilarity=0.9933;PctRecOverlap=0.1767;SizeDiff=-2;StartDistance=-245;EndDistance=-247;GTMatch=0;TruScore=71;MatchId=2467.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:0|1:26:2:1:26:./.:0:0:0:0:0/0:66:0:./.:.:.:.:.:.
chr3	16793203	HG2_Ill_svaba_3788	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATG	A	20	PASS	ClusterIDs=HG2_PB_HySA_5815:HG3_PB_HySA_4727:HG2_PB_assemblyticsfalcon_17277:HG4_Ill_svaba_3879:HG4_Ill_scalpel_2890:HG4_Ill_manta_742:HG4_Ill_Krunchall_4424:HG4_Ill_GATKHC_5079:HG4_Ill_GATKHCSBGrefine_2137:HG4_Ill_250bpfermikitraw_4209:HG4_Ill_150bpfermikitraw_4036:HG4_CG_vcfBeta_2023:HG3_PB_assemblyticsfalcon_17202:HG3_Ill_svaba_3899:HG3_Ill_scalpel_3089:HG3_Ill_manta_681:HG3_Ill_Krunchall_4208:HG3_Ill_GATKHC_5108:HG3_Ill_GATKHCSBGrefine_2049:HG3_Ill_250bpfermikitraw_4090:HG3_Ill_150bpfermikitraw_3953:HG3_CG_vcfBeta_1732:HG2_Ill_svaba_3788:HG2_Ill_scalpel_2975:HG2_Ill_manta_867:HG2_Ill_SpiralSDKrefine_10808:HG2_Ill_Krunchall_4234:HG2_Ill_GATKHC_5010:HG2_Ill_GATKHCSBGrefine_2055:HG2_Ill_250bpfermikitraw_4177:HG2_Ill_150bpfermikitraw_3864:HG2_CG_vcfBeta_1840:HG3_PB_pbsv_3052:HG2_PB_pbsv_3094:HG4_PB_pbsv_3099:HG2_PB_assemblyticsPBcR_16701;NumClusterSVs=36;ExactMatchIDs=HG2_CG_vcfBeta_1840:HG2_Ill_150bpfermikitraw_3864:HG2_Ill_250bpfermikitraw_4177:HG2_Ill_GATKHCSBGrefine_2055:HG2_Ill_GATKHC_5010:HG2_Ill_Krunchall_4234:HG2_Ill_SpiralSDKrefine_10808:HG2_Ill_manta_867:HG2_Ill_scalpel_2975:HG2_Ill_svaba_3788:HG3_CG_vcfBeta_1732:HG3_Ill_150bpfermikitraw_3953:HG3_Ill_250bpfermikitraw_4090:HG3_Ill_GATKHCSBGrefine_2049:HG3_Ill_GATKHC_5108:HG3_Ill_Krunchall_4208:HG3_Ill_manta_681:HG3_Ill_scalpel_3089:HG3_Ill_svaba_3899:HG3_PB_assemblyticsfalcon_17202:HG4_CG_vcfBeta_2023:HG4_Ill_150bpfermikitraw_4036:HG4_Ill_250bpfermikitraw_4209:HG4_Ill_GATKHCSBGrefine_2137:HG4_Ill_GATKHC_5079:HG4_Ill_Krunchall_4424:HG4_Ill_manta_742:HG4_Ill_scalpel_2890:HG4_Ill_svaba_3879;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.0714286;PBcalls=8;Illcalls=25;TenXcalls=0;CGcalls=3;PBexactcalls=1;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=3;HG2count=14;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=-38;DistForward=1001;DistMin=-38;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:16793202-16793260;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2468.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:1:23:3:20:./.:0:0:0:0:1/1:0:84:./.:.:.:.:.:.
chr3	18755817	HG4_10X_allpass_557	GCTGTCACCTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2335:HG2_PB_assemblyticsPBcR_16713:HG4_Ill_Krunchall_4438:HG2_Ill_Krunchall_4243:HG2_PB_assemblyticsfalcon_17292:HG2_PB_SVrefine2PB10Xhap12_2281:HG2_PB_PB10Xdip_20262:HG2_PB_PB10Xdip_20261:HG2_Ill_tnscope_318:HG4_PB_pbsv_3109:HG4_PB_SVrefine2PBcRDovetail_1646:HG4_Ill_scalpel_2898:HG4_Ill_manta_746:HG4_Ill_MetaSV_3301:HG4_Ill_GATKHCSBGrefine_2145:HG4_10X_allpass_557:HG2_PB_pbsv_3102:HG2_PB_SVrefine2PBcRplusDovetail_7287:HG2_PB_SVrefine2PB10Xhap12_2280:HG2_PB_SVrefine2Falcon2Bionano_1384:HG2_PB_SVrefine2Falcon1plusDovetail_7864:HG2_Ill_scalpel_2981:HG2_Ill_manta_870:HG2_Ill_breakscan11_432:HG2_Ill_SpiralSDKrefine_10813:HG2_Ill_SVrefine2DISCOVARplusDovetail_8340:HG2_Ill_GATKHCSBGrefine_2060:HG2_10X_allpass_471;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2335:HG2_PB_PB10Xdip_20261:HG4_PB_pbsv_3109:HG4_PB_SVrefine2PBcRDovetail_1646:HG4_Ill_scalpel_2898:HG4_Ill_manta_746:HG4_Ill_MetaSV_3301:HG4_Ill_GATKHCSBGrefine_2145:HG4_10X_allpass_557:HG2_PB_pbsv_3102:HG2_PB_SVrefine2PBcRplusDovetail_7287:HG2_PB_SVrefine2PB10Xhap12_2280:HG2_PB_SVrefine2Falcon2Bionano_1384:HG2_PB_SVrefine2Falcon1plusDovetail_7864:HG2_Ill_scalpel_2981:HG2_Ill_manta_870:HG2_Ill_breakscan11_432:HG2_Ill_SpiralSDKrefine_10813:HG2_Ill_SVrefine2DISCOVARplusDovetail_8340:HG2_Ill_GATKHCSBGrefine_2060:HG2_10X_allpass_471;NumExactMatchSVs=21;ClusterMaxShiftDist=0.109091;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.109091;PBcalls=12;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=57841;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=3:18755818-18756143;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:32:0|1:36:0:2:29:./.:0:0:0:0:0/1:24:18:0/1:19:5:.:.:.
chr3	19915698	HG2_10X_SVrefine210Xhap12_2337	ATTCCTTTCCAGGGTGCATAACCACCCATGGACCTCTGCTTATCGGATTAGTTACGCTCACCAATGTAGCAGTCCTGCACTCCTTTTCCCGCCTTTCTTGACCACAAAGAAAGGGGCCTGGGCTGCTGGATTCTAGTGGTCCTTTACCAGCGTGCCCAACATTGCCTTTGTGCTCAGAGGTGAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2337:HG3_PB_assemblyticsfalcon_17226:HG2_PB_assemblyticsfalcon_17300:HG4_PB_SVrefine2Falcon1Dovetail_1870:HG3_PB_SVrefine2Falcon1Dovetail_1923:HG2_PB_SVrefine2Falcon1plusDovetail_7868:HG2_Ill_Krunchall_4249:HG2_PB_pbsv_3109:HG2_PB_SVrefine2PBcRplusDovetail_7290:HG2_PB_assemblyticsPBcR_16721:HG3_PB_pbsv_3067:HG2_PB_SVrefine2PB10Xhap12_2286:HG2_PB_PB10Xdip_20332:HG2_PB_PB10Xdip_20331:HG3_Ill_GATKHCSBGrefine_2060:HG3_10X_allpass_588:HG2_Ill_GATKHCSBGrefine_2063:HG2_10X_allpass_472:HG2_PB_HySA_5838:HG3_PB_HySA_4749:HG3_PB_SVrefine2PBcRDovetail_1547:HG3_Ill_SVrefine2DISCOVARDovetail_2264:HG2_PB_SVrefine2PB10Xhap12_2285:HG2_Ill_SVrefine2DISCOVARplusDovetail_8342;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2337:HG3_PB_SVrefine2PBcRDovetail_1547:HG3_Ill_SVrefine2DISCOVARDovetail_2264:HG2_PB_SVrefine2PB10Xhap12_2285:HG2_Ill_SVrefine2DISCOVARplusDovetail_8342;NumExactMatchSVs=5;ClusterMaxShiftDist=0.20649;ClusterMaxSizeDiff=0.20649;ClusterMaxEditDist=0.248521;PBcalls=16;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-183;DistBack=33974;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=184;REFWIDENED=3:19915699-19916065;PctSeqSimilarity=0.9573;PctSizeSimilarity=1;PctRecOverlap=0.3696;SizeDiff=0;StartDistance=-116;EndDistance=-116;GTMatch=0;TruScore=77;MatchId=2470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:43:0|1:35:2:1:40:./.:0:0:0:0:./.:40:5:./.:.:.:.:.:.
chr3	20011444	HG4_PB_SVrefine2Falcon1Dovetail_1871	TGCCACCATGCCCGGCTAATTTGTATTTTTAGTAGAGACGGGTTTTCACCATGTTGGTCAGGCTGGCCTTGAATTCCAGACCTTGTGATCCACCCACCTCG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_3113:HG3_PB_pbsv_3068:HG2_PB_pbsv_3110:HG4_Ill_MetaSV_3302:HG4_PB_SVrefine2PBcRDovetail_1649:HG4_PB_SVrefine2Falcon1Dovetail_1871:HG4_Ill_SVrefine2DISCOVARDovetail_2282:HG4_Ill_250bpfermikitraw_4230:HG4_Ill_150bpfermikitraw_4053:HG3_Ill_SVrefine2DISCOVARDovetail_2267:HG2_PB_SVrefine2PB10Xhap12_2287:HG2_PB_SVrefine2Falcon2Bionano_1387:HG2_PB_SVrefine2Falcon1plusDovetail_7869:HG2_Ill_250bpfermikitraw_4190;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4190:HG2_PB_SVrefine2Falcon1plusDovetail_7869:HG2_PB_SVrefine2Falcon2Bionano_1387:HG2_PB_SVrefine2PB10Xhap12_2287:HG3_Ill_SVrefine2DISCOVARDovetail_2267:HG4_Ill_150bpfermikitraw_4053:HG4_Ill_250bpfermikitraw_4230:HG4_Ill_SVrefine2DISCOVARDovetail_2282:HG4_PB_SVrefine2Falcon1Dovetail_1871:HG4_PB_SVrefine2PBcRDovetail_1649;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.0301508;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-100;DistBack=0;DistForward=-86;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=103;REFWIDENED=3:20011445-20011647;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2471.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:19:0|1:26:3:2:16:./.:0:0:0:0:0/1:21:17:./.:.:.:.:.:.
chr3	21009517	HG2_PB_SVrefine2PBcRplusDovetail_7293	GGGATGGTATGGAGAGATAATGGGCGATGTTTCTCAGGGCTGCTTTGAGCAGGATTAGGGGCGGCATGGGAACCTAGAGTGGGAGAAATTAAGCTGAAAGAAGATTTTGTGGTAAGGGTGATATTGTGGGGTTGTTAGAAGAAACATTTGTCATGTAGAATTATTGGTGATGGCCTGGATATGGTTTTGTATGAATTGAAAAACTAAATGGAATAACGGAGAAAAACAGGTATAAAAGGTCTAAGAATTGGGACGACTCAGGATATCTGATTAGAGAGTGCCTAAGGAGATTCAGCATAGTCCTGCCAGCAAAGATTATTTATTTACTTTAAGAGTTAAGAGTGGCAGTTTGGGGATAGCACCAGGAGATATCAGCTGTGATGGCTTGAAGAAACAGTGTAAACCGGCAGTGTAAACAAGAGCGGGCATGTATGAGTAGTTGAGAATGGTGAATAGGAGTATGACTAGACAGAAGATAGTAGGGATGACAAGTTTTTGGGGGCACAGTCTAAGTTGGTCTGATGTCCGGAATGAGACTGGGGCCTAATAAAAAGGAGCATCTATACGGGAGCTTAAGTAGGCTGTACCTTGTAGCATTCTGAGGACAGGTCTGACTTCTGAGAAGGGAAAGTGGTAAAAGTATTGTCCAGTCCTTTTTAAGTTGGTGGCTGAGCTTGGTGAGGTGTGTTTTTAAAAGACCTTTAGTCCATTCTACTTTTCTTGAAGATGGAGGACCGTAAGTGATATAAAGGTTTCACTGAATACTAAGAGCCTGAAAAACTGCTTGGCTGATTCGACTAATAAAGGCTCATCTGTTATCAGACTGTATAGAGGTGGGAAGGCTAAACTGAGGAATTATGTCTGACAGAATGGAAGAAATGACTGCGGTGGCTTTCTCAGACCCTGTAGGAAAGGACTCTACCTATCCAGTGAGAGTGTCTACCTAGACTAAGAGGTATTTTAGTTATCTGACTCGGGGCATGTTGAGTAAAGCTAATTTGCCAGTCCTGGGTGGGGGCAAATCCTCGAGCTTGATGTGTAGGGAAGGGAGGGGGCCTGAATAATCCCTGAGGAGTAGTAGAATAGCAGATGGAACACTGAGAAGTTATTTCCTTGAGGATAGATTTCCACGATGGAAAGGAAATGAGAGGTTCTAAGAGGTGGGCTAGTGGCTTGTACTATAGCATAGCCTGCCTTTGCTAGTGTGTGGCAATTAGGCCTGGTGGAACCGCCGTCAATAAATCAAGCGTGATCAGGGTGAGGAACAGGAAAGAAGGAAATTTGGGGAAATGGGGTGAATGTCAGGTGGATCAGAGAGATACAGTCATGGGGGTCCGGTGTGGTATCAGGAATAATGTGGGAGGCCAGATTGAAGTCTGGGCCGGGAACAATGGTAATTGTAGGACTTAACAAAGAGTGAGTACAGCTGAAGGAGCCGGGGAGCAGAAAGTATATGCGTCAGGTATGAGGAAGAAAATAGATTTTGGAAGTTAGGAGAAATGTAGGGAGTGAGTTGAGCATAGTTTGTAATTTTTAGGGCCTCTAAAAGTATTAAAGCAGCAGCAGCTGCTGCATGCAGACATGAGGGCTAGGCTAAAACAGTAAGGTCAAGTTGCTTGCACAGAAAGGCTACCGGGTGAGGTCCTGGCTCTTGTGTAAGAATTCTGACCGCACTAACCATGCCTAGGAAGGAAAGGAATTGTTTTGTAAGGGATTGAGGTTTGGGAGATTAATTGGACCCGATCAGCAGGGAAAGCACGTGTGTTTTTATGAGAATTATGCCGAGATAGGTAACAGATGAGGATGAAATTTGGGCTTGACTGAAGTAATAGGAGCTGTCTGTGAAGCCTTGCGGCAGGACAGCCCAGGTAATTTGCTGAGCCTAATGGGTGTCAGGGTCAGTCTAAGTGAAAGCAAAGAAAGGCTGGGACAAGGGGTGCAGGGGAATAGTGAAAAAACCATCTTTAAGATTGAGAACGGAATAGTGAGTTGTGGAGGAAGGTATTGAGGACAAAATTGTGTACAGGTTGGGCACCACAGGGTGGATAGGCAAAACAATTTGGTTGGTAAGGCACAGATCCTGAACTAATCTGTAAGACTTGTCCGGTTTTTGGACAGGTAAAATGGGGGAATTGTAAGGAGAGTTTATAGGCTTTAAAGGGCCGTGCTGTAGCAGGCGAGTGATAACAGGCTTTAATCCTTTCAAAGCATGCTGTGGGATGGGATATTGGCATTGAGTGGGGTAAGGGTGATTAGGTTTTAATGAGATGGTAAGGGGTGCATGATCGGTAGCCAAGGAGGGAGTAGAGGTATCTTATACTTGTGGGGTAAGGTGGGGGAATACAAGAGGAGGATGCAAAGGAGGCTTTGGATTGGGAAGACAGGTAGCAATGAGATGTAGCTGTAATCCAGGAATAGTCAGGGAAGCAGATAATTTACTTAAAGTGTCTCGGCCTAATAAGGGAGCTGGGCAGGTGGGGATAACTAAAAGGATTGCTTAAAAGAGTATTGTCTAAGTTGGCACCAGAGTTGAGGAGTTTTAAGAGGTTTAGAAGCCTGGCTGTCAATACCCACAACAGTTATGGAGGCAAGGGAAACAGGCCTTTGAAAATAAGGTAATGTGGAGTGAGTAGCCTCGGTATTGATTAAGAAGGGGACAGACTTACCCTCCACTGTGAGAGTTACCTGAAGCTCAGCGTCTGTGATAGTCCTGTAGGCTTCCGAGGCAATCAGGCAGCGTCAGTCTTCAGCCGCTAAGCCAAGAAGATCTGGGAAGGAGTCAGTCAGAGAGCCTTGGGCCAGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTGAGTTGAACAGTCTGATTTCCAGTGGGGTCCCGCACAGTTGGGACGCGGCTTAGGAGGAATCCTGGGCTGCAGGCATTCCTTGGCCTTGTGGCCAGATTTCTGGCACTTGTAGCAACCTCCTTGGGGAGGAGGTTCTGGAGGAATGCCTGGCTGCTGTGGCTCAGGCGTTTGGAAGTTCTTGTGTGCTGGAGATGTGGGTGGGGTGTGTCTCACAGTGGAGGTAAGGAATTGCAACTTTTTTCTGTTATTGTAAACCTTGAAGGCGAGGTTAATTAAATCCTGTTGTAGGGTTTGAGGGCCGGAATTTAATTTTTGGAGTTTTATTTAATGTCGGGAGCAGATTGGGTAATAAAATGTATTTTGAGAATAAGACGGCCTTTTGACCTTTTAGGGTCTAGGGCTGTAAAGCGTCTCAGGGTTGCTGCCGAACAAGCCATGAACTGGGCTGGGTTTTTTATATTTGATGAAAAAGAGTCTAAACGCTATTTGATTTGGGAGAGGTCGGATAAAGAAAAAGGAGCATTAACCTTGACTATGCCTTTAGCTTCAGCCACCTTTTTAAGAGTAAATTGCTGGGCAGGTTGGGGAGGGCTACTCACGGACTGAAACTGTAAACCGGACTGGGTGTGAGGAGGGGAGGTGATAAAAAGATTATAGGGTGGAGGAGCAGAGGCTGAGGAAGAATTGGGACTTAGCTCGGCCTGGTGATGAGCAGCCTGAGGAGGAGGGGAAATATCAGATGGGTCTGTAGAAAAGGAAGACTGGAAAGACTCAGCAACGCTTGGGGTTGGGACTGAGGGGACAACCTCAGTCAGGAGAGAAAGAAGGAGGATTTGGGAGGAATTGCATTGGGAACAGAGACTAGAGAGGGACAGATGTGTAAAAGAATGCCTGGATGTCAGGCACCTCAGACCATTTGCCCGTTTTATGACAAGAATTATTTAGATCTTGTAGGATGGAAAAATTGAAAGTGCCATTTTCTGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGGCATTGCAGAAGAAAATAAGATGCTTAGATTTTAGGTCAGGTGAGAGTTGAAGAGGTTTTAAGTTCTTAAGAACACAGGCTAAGGGAGAAGAAGGAGGAATGGAGGGTGGAAGGTTGCCCATAGTGAA	G	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3334:HG2_10X_allpass_473:HG3_10X_allpass_589:HG2_PB_HySA_5847:HG2_PB_assemblyticsPBcR_16725:HG2_PB_assemblyticsfalcon_17309:HG3_PB_pbsv_3077:HG3_PB_SVrefine2PBcRDovetail_1551:HG2_PB_pbsv_3115:HG2_PB_SVrefine2PBcRplusDovetail_7293:HG2_PB_SVrefine2PB10Xhap12_2291:HG2_PB_SVrefine2Falcon2Bionano_1390:HG2_Ill_MetaSV_3175:HG4_PB_assemblyticsfalcon_16943:HG4_PB_SVrefine2Falcon1Dovetail_1876:HG3_PB_HySA_4763:HG2_PB_SVrefine2Falcon1plusDovetail_7874:HG2_Ill_tnscope_319:HG3_PB_assemblyticsfalcon_17241:HG3_PB_SVrefine2Falcon1Dovetail_1931;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_MetaSV_3175:HG2_PB_SVrefine2Falcon2Bionano_1390:HG2_PB_SVrefine2PB10Xhap12_2291:HG2_PB_SVrefine2PBcRplusDovetail_7293:HG2_PB_pbsv_3115:HG3_PB_SVrefine2PBcRDovetail_1551:HG3_PB_pbsv_3077;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0340993;ClusterMaxSizeDiff=0.0340993;ClusterMaxEditDist=0.0340993;PBcalls=15;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-3986;DistBack=-4793;DistForward=-3985;DistMin=-4793;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:21009518-21013506;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:47:./.:23:16:6:11:./.:0:0:0:0:0/1:41:20:0/1:289:136:4074:.:.
chr3	21457497	HG2_10X_allpass_474	GCATGAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_433:HG4_PB_HySA_4679:HG2_PB_HySA_5850:HG4_Ill_Krunchall_4460:HG3_Ill_Krunchall_4241:HG2_Ill_Krunchall_4264:HG2_PB_assemblyticsfalcon_17313:HG2_PB_assemblyticsPBcR_16728:HG4_PB_assemblyticsfalcon_16947:HG3_PB_assemblyticsfalcon_17248:HG2_PB_pbsv_3118:HG3_PB_pbsv_3079:HG4_Ill_MetaSV_3304:HG3_Ill_MetaSV_3335:HG2_Ill_tnscope_320:HG2_Ill_MetaSV_3176:HG4_PB_pbsv_3123:HG4_PB_SVrefine2PBcRDovetail_1654:HG4_PB_SVrefine2Falcon1Dovetail_1878:HG4_Ill_svaba_3917:HG4_Ill_scalpel_2916:HG4_Ill_manta_751:HG4_Ill_SVrefine2DISCOVARDovetail_2292:HG4_Ill_GATKHCSBGrefine_2154:HG4_10X_allpass_559:HG3_PB_SVrefine2PBcRDovetail_1552:HG3_PB_SVrefine2Falcon1Dovetail_1934:HG3_Ill_svaba_3939:HG3_Ill_scalpel_3113:HG3_Ill_manta_688:HG3_Ill_SVrefine2DISCOVARDovetail_2276:HG3_Ill_GATKHCSBGrefine_2063:HG3_10X_allpass_590:HG2_PB_SVrefine2PBcRplusDovetail_7295:HG2_PB_SVrefine2PB10Xhap12_2293:HG2_PB_SVrefine2Falcon2Bionano_1392:HG2_PB_SVrefine2Falcon1plusDovetail_7876:HG2_Ill_svaba_3824:HG2_Ill_scalpel_2997:HG2_Ill_manta_875:HG2_Ill_SpiralSDKrefine_10833:HG2_Ill_SVrefine2DISCOVARplusDovetail_8351:HG2_Ill_GATKHCSBGrefine_2069:HG2_10X_allpass_474:HG2_10X_SVrefine210Xhap12_2343;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2343:HG2_10X_allpass_474:HG2_Ill_GATKHCSBGrefine_2069:HG2_Ill_SVrefine2DISCOVARplusDovetail_8351:HG2_Ill_SpiralSDKrefine_10833:HG2_Ill_manta_875:HG2_Ill_scalpel_2997:HG2_Ill_svaba_3824:HG2_PB_SVrefine2Falcon1plusDovetail_7876:HG2_PB_SVrefine2Falcon2Bionano_1392:HG2_PB_SVrefine2PB10Xhap12_2293:HG2_PB_SVrefine2PBcRplusDovetail_7295:HG3_10X_allpass_590:HG3_Ill_GATKHCSBGrefine_2063:HG3_Ill_SVrefine2DISCOVARDovetail_2276:HG3_Ill_manta_688:HG3_Ill_scalpel_3113:HG3_Ill_svaba_3939:HG3_PB_SVrefine2Falcon1Dovetail_1934:HG3_PB_SVrefine2PBcRDovetail_1552:HG4_10X_allpass_559:HG4_Ill_GATKHCSBGrefine_2154:HG4_Ill_SVrefine2DISCOVARDovetail_2292:HG4_Ill_manta_751:HG4_Ill_scalpel_2916:HG4_Ill_svaba_3917:HG4_PB_SVrefine2Falcon1Dovetail_1878:HG4_PB_SVrefine2PBcRDovetail_1654:HG4_PB_pbsv_3123;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0658307;ClusterMaxSizeDiff=0.0658307;ClusterMaxEditDist=0.0658307;PBcalls=17;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=8225;DistForward=2862;DistMin=2862;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=3:21457498-21457831;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:80:1/1:0:8:1:45:./.:0:0:0:0:1/1:0:44:./.:1:16:.:.:.
chr3	23764057	HG2_Ill_manta_878	TAAAATGTTTGATACAAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAGCACGGTGAAACCCCTTCTCTACTAAAAATACAAAAAATTAGCCGGGAGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGCCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGAGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_210:HG2_10X_allpass_475:HG3_PB_HySA_4781:HG4_Ill_Krunchall_4478:HG3_Ill_Krunchall_4256:HG2_Ill_Krunchall_4280:HG2_PB_PB10Xdip_20619:HG2_PB_PB10Xdip_20618:HG2_PB_SVrefine2PB10Xhap12_2296:HG2_PB_assemblyticsPBcR_16742:HG4_Ill_Spiral_247:HG3_Ill_Spiral_3331:HG2_PB_pbsv_3121:HG2_PB_HySA_5864:HG3_Ill_MetaSV_3338:HG2_Ill_tnscope_321:HG4_PB_pbsv_3128:HG4_Ill_manta_753:HG4_Ill_MetaSV_3308:HG4_Ill_GATKHCSBGrefine_2159:HG4_10X_allpass_561:HG3_PB_SVrefine2Falcon1Dovetail_1937:HG3_Ill_manta_690:HG3_Ill_GATKHCSBGrefine_2068:HG3_10X_allpass_592:HG2_PB_assemblyticsfalcon_17328:HG2_PB_SVrefine2PBcRplusDovetail_7297:HG2_PB_SVrefine2PB10Xhap12_2295:HG2_PB_SVrefine2Falcon2Bionano_1394:HG2_PB_SVrefine2Falcon1plusDovetail_7878:HG2_Ill_manta_878:HG2_Ill_MetaSV_3179:HG2_Ill_GATKHCSBGrefine_2072:HG2_10X_SVrefine210Xhap12_2351:HG3_PB_pbsv_3084;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2351:HG2_Ill_GATKHCSBGrefine_2072:HG2_Ill_MetaSV_3179:HG2_Ill_manta_878:HG2_PB_SVrefine2Falcon1plusDovetail_7878:HG2_PB_SVrefine2Falcon2Bionano_1394:HG2_PB_SVrefine2PB10Xhap12_2295:HG2_PB_SVrefine2PBcRplusDovetail_7297:HG2_PB_assemblyticsfalcon_17328:HG3_10X_allpass_592:HG3_Ill_GATKHCSBGrefine_2068:HG3_Ill_manta_690:HG3_PB_SVrefine2Falcon1Dovetail_1937:HG4_10X_allpass_561:HG4_Ill_GATKHCSBGrefine_2159:HG4_Ill_MetaSV_3308:HG4_Ill_manta_753:HG4_PB_pbsv_3128;NumExactMatchSVs=18;ClusterMaxShiftDist=0.095679;ClusterMaxSizeDiff=0.095679;ClusterMaxEditDist=0.095679;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=-331;DistForward=64281;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:23764058-23764403;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2474.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:29:0|1:18:0:0:28:./.:0:0:0:0:0/1:28:33:0/1:21:9:.:.:.
chr3	25030888	HG2_PB_SVrefine2PBcRplusDovetail_7299	CATTACTGAATTAGAATTTTCTCTCTAATATTGTAATATCGATTTTCACTCCCACCAGCAATATACTCGAGTTTCCACTTCCCTACATCCTCACAAATGCTTGATATTGCAAGGTATTTTAATGTTTGCCTGGCTGCTAGGTTTGAAATATCATCTCCCCTTGATGTTTAATATATATTTTTCTGATTATTAGTGAAGTTGAGCGTCATTTTTTAACCAGATTATCTCATCTTTTATTTCTCTTATTTACTCTTTTCTTTTTAGACATTTTATTGTGTTAAATACTAAGCCTTTATGAATCATGCACAAAGCACAGATAGGTGCCCAGTCTATAGCTTAATTTCCAACTTTCATTTTAACTGTTGTCATATGTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCCCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTCCTGGGATTACAGGCGTGAGCCACCGCGCCCTGCCTTTCTTTTTAATATAATGGAACTTTTCTTTTTTTTTTTTGTTATTTCACTATTGTTTATTTTCTTTTTTTCTTCTTCTTTTTTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACAATGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTCCTAATGCTATCCCTCCCCCCTCCCCCCACCCCACAACAGTCCCCAGAGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTGCCATCTATGATAATCAAACTTTCCTACATTTTAAAAAAAATCCTGCCTAATCTAACATAAATATACTTAGATATACTCTAGTAAAGTTTGTTTTATTTTTATATTTTTAATTTCATCTGAGATTATTAAATATAATGTGAGATATCTGATTTGTTCTTTTTTGCATTTCTCTCATAAGCCAAGCTTAAATGAATACATAGTTTTATTCTGCAACCTACATTCCATTCTATTTTGTTTATTTGTCTAGATCTCAAACAGTATCCCTGTGTTTCTTTTAGTGTTTTTTATTACACCCTGCTCTTTGGCTTGTATAGTCCTGCCTCCTCATTATTACTCTTCTTCAAATTTTCTTTTGACT	GGTGTAC	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3340:HG3_PB_pbsv_3086:HG4_PB_assemblyticsfalcon_16967:HG4_PB_SVrefine2PBcRDovetail_1657:HG4_PB_SVrefine2Falcon1Dovetail_1881:HG4_Ill_SVrefine2DISCOVARDovetail_2307:HG3_PB_assemblyticsfalcon_17273:HG3_PB_SVrefine2PBcRDovetail_1553:HG3_PB_SVrefine2Falcon1Dovetail_1940:HG3_Ill_SVrefine2DISCOVARDovetail_2298:HG2_PB_SVrefine2PBcRplusDovetail_7299:HG2_PB_SVrefine2PB10Xhap12_2299:HG2_PB_SVrefine2Falcon2Bionano_1397:HG2_PB_SVrefine2Falcon1plusDovetail_7879:HG2_PB_PB10Xdip_20625:HG2_PB_PB10Xdip_20624:HG2_Ill_SVrefine2DISCOVARplusDovetail_8358:HG2_10X_SVrefine210Xhap12_2354:HG2_Ill_tnscope_322:HG2_10X_allpass_477:HG2_PB_pbsv_3123:HG2_PB_HySA_5872:HG2_PB_assemblyticsfalcon_17335:HG2_PB_assemblyticsPBcR_16749:HG4_10X_allpass_563:HG3_10X_allpass_594:HG4_PB_pbsv_3131:HG4_Ill_Krunchall_4484:HG2_Ill_Krunchall_4287:HG4_Ill_MetaSV_3310:HG2_Ill_MetaSV_3181;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2354:HG2_Ill_SVrefine2DISCOVARplusDovetail_8358:HG2_PB_PB10Xdip_20624:HG2_PB_PB10Xdip_20625:HG2_PB_SVrefine2Falcon1plusDovetail_7879:HG2_PB_SVrefine2Falcon2Bionano_1397:HG2_PB_SVrefine2PB10Xhap12_2299:HG2_PB_SVrefine2PBcRplusDovetail_7299:HG3_Ill_SVrefine2DISCOVARDovetail_2298:HG3_PB_SVrefine2Falcon1Dovetail_1940:HG3_PB_SVrefine2PBcRDovetail_1553:HG3_PB_assemblyticsfalcon_17273:HG4_Ill_SVrefine2DISCOVARDovetail_2307:HG4_PB_SVrefine2Falcon1Dovetail_1881:HG4_PB_SVrefine2PBcRDovetail_1657:HG4_PB_assemblyticsfalcon_16967;NumExactMatchSVs=16;ClusterMaxShiftDist=0.103569;ClusterMaxSizeDiff=0.103569;ClusterMaxEditDist=0.103569;PBcalls=18;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1355;DistBack=-318;DistForward=-1040;DistMin=-1040;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:25030888-25032249;PctSeqSimilarity=0.9982;PctSizeSimilarity=0.9993;PctRecOverlap=0.9963;SizeDiff=-1;StartDistance=-5;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:83:1/1:1:21:0:17:./.:0:0:0:0:1/1:0:47:1/1:3:85:1441:.:.
chr3	26123847	HG3_Ill_SVrefine2DISCOVARDovetail_2303	TACATTTATACATACATACATAAATACATAACATATACTTGCATATATGTGTGTGGGTATATATATGTGTGTGTGTGTGTGCATATATATATATATATATATATATGCAAGTTAACAGAATAATATGGA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_3127:HG4_PB_HySA_4705:HG3_Ill_MetaSV_3341:HG4_PB_assemblyticsfalcon_16975:HG4_PB_SVrefine2PBcRDovetail_1659:HG4_PB_SVrefine2Falcon1Dovetail_1884:HG4_Ill_svaba_3949:HG4_Ill_scalpel_2939:HG4_Ill_manta_756:HG4_Ill_SVrefine2DISCOVARDovetail_2311:HG4_Ill_MetaSV_3311:HG4_Ill_GATKHC_5154:HG4_Ill_GATKHCSBGrefine_2167:HG4_CG_vcfBeta_2053:HG4_10X_allpass_564:HG3_PB_assemblyticsfalcon_17282:HG3_PB_SVrefine2PBcRDovetail_1556:HG3_PB_SVrefine2Falcon1Dovetail_1944:HG3_Ill_svaba_3971:HG3_Ill_scalpel_3144:HG3_Ill_manta_693:HG3_Ill_SVrefine2DISCOVARDovetail_2303:HG3_Ill_GATKHCSBGrefine_2077:HG3_Ill_250bpfermikitraw_4153:HG3_Ill_150bpfermikitraw_4021:HG3_CG_vcfBeta_1777:HG3_10X_allpass_595:HG2_Ill_svaba_3851:HG2_Ill_manta_881:HG2_Ill_SpiralSDKrefine_10856:HG2_Ill_SVrefine2DISCOVARplusDovetail_8361:HG2_Ill_MetaSV_3182:HG2_Ill_GATKHC_5080:HG2_Ill_GATKHCSBGrefine_2081:HG2_10X_SVrefine210Xhap12_2355:HG4_Ill_Krunchall_4496:HG3_Ill_Krunchall_4275:HG2_Ill_Krunchall_4297:HG4_PB_pbsv_3136:HG3_PB_pbsv_3092:HG3_PB_HySA_4798;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2355:HG2_Ill_GATKHCSBGrefine_2081:HG2_Ill_GATKHC_5080:HG2_Ill_MetaSV_3182:HG2_Ill_SVrefine2DISCOVARplusDovetail_8361:HG2_Ill_SpiralSDKrefine_10856:HG2_Ill_manta_881:HG2_Ill_svaba_3851:HG3_10X_allpass_595:HG3_CG_vcfBeta_1777:HG3_Ill_150bpfermikitraw_4021:HG3_Ill_250bpfermikitraw_4153:HG3_Ill_GATKHCSBGrefine_2077:HG3_Ill_SVrefine2DISCOVARDovetail_2303:HG3_Ill_manta_693:HG3_Ill_scalpel_3144:HG3_Ill_svaba_3971:HG3_PB_SVrefine2Falcon1Dovetail_1944:HG3_PB_SVrefine2PBcRDovetail_1556:HG3_PB_assemblyticsfalcon_17282:HG4_10X_allpass_564:HG4_CG_vcfBeta_2053:HG4_Ill_GATKHCSBGrefine_2167:HG4_Ill_GATKHC_5154:HG4_Ill_MetaSV_3311:HG4_Ill_SVrefine2DISCOVARDovetail_2311:HG4_Ill_manta_756:HG4_Ill_scalpel_2939:HG4_Ill_svaba_3949:HG4_PB_SVrefine2Falcon1Dovetail_1884:HG4_PB_SVrefine2PBcRDovetail_1659:HG4_PB_assemblyticsfalcon_16975;NumExactMatchSVs=32;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.237037;PBcalls=11;Illcalls=25;TenXcalls=3;CGcalls=2;PBexactcalls=6;Illexactcalls=21;TenXexactcalls=3;CGexactcalls=2;HG2count=10;HG3count=16;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-128;DistBack=2668;DistForward=53353;DistMin=2668;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:26123848-26123976;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2476.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:61:39:0|1:58:1:1:37:./.:0:0:0:0:0/1:31:25:./.:.:.:.:.:.
chr3	26450969	HG2_PB_SVrefine2Falcon2Bionano_1402	GTTGGTGGATGTTTCCTAAGGAGGTACACACTAAGAGTTATTCAGATGACTACATGTATGGGCAATGTTATACTCAGAAGGCATCAGAAGCGAAGGAACAGACAAATCAGGCAACACATACATCTCAGAAATGGTAGCCATGAAGAGTAAAGCAGAGTGATGGAAGCTAGAGAAAAAGAGATTTGATAATGAGGGGACTGATTGGATTGTTAAGAAACTTATGAGCAACGGGAAGTCATTGGAAGTATATTAATCAACTTTTACTATGTGATGCTGCATGACAACCTCAAAATCTCGATGGCTTACAACAACACATATTTTTTTCTTGCTACTTTACATGTTGGTGGCTTTTGGTTACATGCAGTGCTTCTTCTCATGGCTGTGAGTTTAGACCTGCTCCACATTCCAGGACGCAAGCTCAAGGACCGGTCTCTAGCATATGTCCTTCTCATGACAGAAGGCAAAGAAGCATAAATACGCAATAAAATTTACAGCTTCTTCTCGGCACATCTGCCAAAACAAGTTGCAGTGTTGGCCTGGCGGGATGGCTCATGACTCTAATACCAACACTTTGGAAGACGGAGGCAAGAGGATCTTTTGACCCCAGGAGTTCAAGACCAGCCTGGCAACATATTGAGACCCATCTCTCTCCAAAAAAAAAAAAAATTAGCTGGACATGGTGGTGCATGCCTGTAGTTCCAGATATTTGGGAGGCTGAGAGAGAAAGATAACTTGAGCCCAAGAGTTCAAGGTTGCAGTGAACTATGATGATGCCACTGCACTCCAGCCTGAATGAAAGAGTGATATCCTGTCTCTATAGGAAAAAACAAAAAAAACAAAAAAACACAAACCCACAAAAAACAAGCTACAGGTTAAGTCCAACATCAGTGGGGTCGAGCCTGTGGTGTAATTCTTTTTATAGGAGAGAGATAAAGAAGTGTGAGTGGATTCTGAAATCTATGGATTTCAGAAAATGGCTTTGTGAATTGTAGCTGACACAATTTGAAAGTAAAACATGGAAATCCCTGAGTCATCATTGACTTTCAATATTTCATCAGGGAAAATGAAGGTCCGAGGTAATGTACATTTTACATTGCAGGCTATCTGTGCTCATCATTCTCAAGGCAAATTTGAGAACAAAACATTACATTTCCTTGAGTCTGTACCCTGTAAAATACTTTCACATACTGTCATTGCACATTCAGTTACGCTCAGAAAGAGGTAAAGTTCACAAAAAGGCAATGCTTTTGTGAGGACTTCTCAGTCATTGGTGTTCATCTGGTCACTGAGTGATCAGCTGCCGCGTTGAATCCCCAGGTGGGAAAGAAAA	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_4298:HG2_Ill_tnscope_323:HG4_PB_assemblyticsfalcon_16977:HG4_PB_SVrefine2Falcon1Dovetail_1886:HG4_Ill_MetaSV_3312:HG4_Ill_GATKHCSBGrefine_2168:HG4_10X_allpass_565:HG3_PB_pbsv_3093:HG3_PB_assemblyticsfalcon_17284:HG3_PB_SVrefine2Falcon1Dovetail_1945:HG3_Ill_SVrefine2DISCOVARDovetail_2305:HG3_Ill_MetaSV_3342:HG3_Ill_GATKHCSBGrefine_2078:HG3_10X_allpass_596:HG2_PB_pbsv_3129:HG2_PB_assemblyticsfalcon_17346:HG2_PB_assemblyticsPBcR_16758:HG2_PB_SVrefine2PBcRplusDovetail_7302:HG2_PB_SVrefine2PB10Xhap12_2303:HG2_PB_SVrefine2Falcon2Bionano_1402:HG2_PB_SVrefine2Falcon1plusDovetail_7883:HG2_Ill_SpiralSDKrefine_10857:HG2_Ill_SVrefine2DISCOVARplusDovetail_8362:HG2_Ill_MetaSV_3184:HG2_Ill_GATKHCSBGrefine_2082:HG2_10X_allpass_478:HG2_10X_SVrefine210Xhap12_2357:HG4_PB_pbsv_3138:HG4_Ill_Krunchall_4497:HG3_Ill_Krunchall_4276:HG2_Ill_breakscan11_435;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2357:HG2_10X_allpass_478:HG2_Ill_GATKHCSBGrefine_2082:HG2_Ill_MetaSV_3184:HG2_Ill_SVrefine2DISCOVARplusDovetail_8362:HG2_Ill_SpiralSDKrefine_10857:HG2_PB_SVrefine2Falcon1plusDovetail_7883:HG2_PB_SVrefine2Falcon2Bionano_1402:HG2_PB_SVrefine2PB10Xhap12_2303:HG2_PB_SVrefine2PBcRplusDovetail_7302:HG2_PB_assemblyticsPBcR_16758:HG2_PB_assemblyticsfalcon_17346:HG2_PB_pbsv_3129:HG3_10X_allpass_596:HG3_Ill_GATKHCSBGrefine_2078:HG3_Ill_MetaSV_3342:HG3_Ill_SVrefine2DISCOVARDovetail_2305:HG3_PB_SVrefine2Falcon1Dovetail_1945:HG3_PB_assemblyticsfalcon_17284:HG3_PB_pbsv_3093:HG4_10X_allpass_565:HG4_Ill_GATKHCSBGrefine_2168:HG4_Ill_MetaSV_3312:HG4_PB_SVrefine2Falcon1Dovetail_1886:HG4_PB_assemblyticsfalcon_16977;NumExactMatchSVs=25;ClusterMaxShiftDist=0.00150376;ClusterMaxSizeDiff=0.00150376;ClusterMaxEditDist=0.00150376;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1329;DistBack=-1331;DistForward=16507;DistMin=-1331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:26450970-26452299;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:74:1/1:3:27:0:17:./.:0:0:0:0:1/1:0:28:1/1:2:72:1369:.:.
chr3	27430321	HG2_Ill_Krunchall_4305	ATAAGATTACATAAGTACCCACATAATACTCTCGTGACCTATAAAGCCTAAAATGTTTACTATCTGGCCCTTTACAGAAAAAGT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_3131:HG2_PB_PB10Xdip_20638:HG2_PB_PB10Xdip_20637:HG3_Ill_svaba_3981:HG3_Ill_250bpfermikitraw_4160:HG2_Ill_svaba_3860:HG2_Ill_250bpfermikitraw_4241:HG3_10X_allpass_598:HG3_Ill_scalpel_3150:HG3_Ill_Krunchall_4283:HG3_Ill_GATKHC_5190:HG3_Ill_GATKHCSBGrefine_2080:HG2_Ill_Krunchall_4305:HG2_Ill_GATKHC_5087:HG2_Ill_GATKHCSBGrefine_2083:HG3_Ill_SVrefine2DISCOVARDovetail_2309:HG2_PB_SVrefine2PB10Xhap12_2304:HG2_Ill_SVrefine2DISCOVARplusDovetail_8367:HG2_10X_SVrefine210Xhap12_2359:HG2_Ill_SpiralSDKrefine_10861:HG3_Ill_manta_695:HG2_Ill_manta_882:HG3_PB_SVrefine2PBcRDovetail_1559:HG3_PB_pbsv_3097;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2083:HG2_Ill_GATKHC_5087:HG2_Ill_Krunchall_4305:HG3_Ill_GATKHCSBGrefine_2080:HG3_Ill_GATKHC_5190:HG3_Ill_Krunchall_4283:HG3_Ill_scalpel_3150;NumExactMatchSVs=7;ClusterMaxShiftDist=0.294416;ClusterMaxSizeDiff=0.294416;ClusterMaxEditDist=0.294416;PBcalls=6;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-83;DistBack=106126;DistForward=100162;DistMin=100162;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:27430320-27430406;PctSeqSimilarity=0.9055;PctSizeSimilarity=0.883;PctRecOverlap=0.8;SizeDiff=-11;StartDistance=-8;EndDistance=-19;GTMatch=0;TruScore=86;MatchId=2478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:32:1|0:0:23:28:5:./.:0:0:0:0:0/1:32:17:./.:.:.:.:.:.
chr3	28167456	HG2_PB_pbsv_3135	GCAACCACTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATATTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_PB_HySA_5893:HG4_PB_assemblyticsfalcon_16987:HG4_PB_SVrefine2Falcon1Dovetail_1893:HG2_Ill_Krunchall_4311:HG2_Ill_tnscope_324:HG2_Ill_MetaSV_3186:HG4_Ill_manta_758:HG4_Ill_SVrefine2DISCOVARDovetail_2317:HG4_Ill_MetaSV_3316:HG4_Ill_GATKHCSBGrefine_2171:HG4_10X_allpass_567:HG2_PB_pbsv_3135:HG2_PB_assemblyticsfalcon_17354:HG2_PB_SVrefine2PB10Xhap12_2307:HG2_PB_SVrefine2Falcon2Bionano_1406:HG2_PB_SVrefine2Falcon1plusDovetail_7886:HG2_Ill_scalpel_3030:HG2_Ill_manta_883:HG2_Ill_SpiralSDKrefine_10864:HG2_Ill_SVrefine2DISCOVARplusDovetail_8373:HG2_Ill_GATKHCSBGrefine_2085:HG2_10X_allpass_479:HG2_10X_SVrefine210Xhap12_2362:HG2_Ill_breakscan11_436;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2362:HG2_10X_allpass_479:HG2_Ill_GATKHCSBGrefine_2085:HG2_Ill_SVrefine2DISCOVARplusDovetail_8373:HG2_Ill_SpiralSDKrefine_10864:HG2_Ill_manta_883:HG2_Ill_scalpel_3030:HG2_PB_SVrefine2Falcon1plusDovetail_7886:HG2_PB_SVrefine2Falcon2Bionano_1406:HG2_PB_SVrefine2PB10Xhap12_2307:HG2_PB_assemblyticsfalcon_17354:HG2_PB_pbsv_3135:HG4_10X_allpass_567:HG4_Ill_GATKHCSBGrefine_2171:HG4_Ill_MetaSV_3316:HG4_Ill_SVrefine2DISCOVARDovetail_2317:HG4_Ill_manta_758;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00916031;ClusterMaxSizeDiff=0.00916031;ClusterMaxEditDist=0.00916031;PBcalls=8;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-330;DistForward=-314;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=3:28167457-28167799;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:0|1:35:0:2:27:./.:0:0:0:0:0/1:31:25:0/1:22:8:.:.:.
chr3	31856630	HG3_Ill_250bpfermikitraw_4197	AGAGAGATGCCCTGCCAGCCCCTGGCTTGCTCTTCCCGCCCTGAGACAACATGAACACC	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_4277:HG4_PB_assemblyticsfalcon_17007:HG4_PB_HySA_4741:HG4_Ill_Spiral_249:HG3_PB_assemblyticsfalcon_17316:HG2_Ill_Spiral_212:HG2_PB_pbsv_3145:HG4_PB_pbsv_3155:HG3_PB_pbsv_3112:HG3_PB_HySA_4831:HG2_PB_HySA_5920:HG4_Ill_svaba_3997:HG4_Ill_scalpel_2967:HG4_Ill_manta_763:HG4_Ill_Krunchall_4544:HG4_Ill_GATKHC_5206:HG4_Ill_GATKHCSBGrefine_2180:HG4_Ill_250bpfermikitraw_4325:HG4_Ill_150bpfermikitraw_4139:HG3_Ill_svaba_4023:HG3_Ill_scalpel_3181:HG3_Ill_manta_699:HG3_Ill_Krunchall_4323:HG3_Ill_GATKHC_5230:HG3_Ill_GATKHCSBGrefine_2092:HG3_Ill_250bpfermikitraw_4197:HG3_Ill_150bpfermikitraw_4067:HG2_PB_assemblyticsfalcon_17379:HG2_PB_assemblyticsPBcR_16792:HG2_Ill_svaba_3896:HG2_Ill_scalpel_3054:HG2_Ill_manta_885:HG2_Ill_Krunchall_4342:HG2_Ill_GATKHC_5125:HG2_Ill_GATKHCSBGrefine_2091;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4277:HG4_Ill_svaba_3997:HG4_Ill_scalpel_2967:HG4_Ill_manta_763:HG4_Ill_Krunchall_4544:HG4_Ill_GATKHC_5206:HG4_Ill_GATKHCSBGrefine_2180:HG4_Ill_250bpfermikitraw_4325:HG4_Ill_150bpfermikitraw_4139:HG3_Ill_svaba_4023:HG3_Ill_scalpel_3181:HG3_Ill_manta_699:HG3_Ill_Krunchall_4323:HG3_Ill_GATKHC_5230:HG3_Ill_GATKHCSBGrefine_2092:HG3_Ill_250bpfermikitraw_4197:HG3_Ill_150bpfermikitraw_4067:HG2_PB_assemblyticsfalcon_17379:HG2_PB_assemblyticsPBcR_16792:HG2_Ill_svaba_3896:HG2_Ill_scalpel_3054:HG2_Ill_manta_885:HG2_Ill_Krunchall_4342:HG2_Ill_GATKHC_5125:HG2_Ill_GATKHCSBGrefine_2091;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.0521739;PBcalls=10;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=2319;DistForward=22141;DistMin=2319;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=62;REFWIDENED=3:31856609-31856728;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:2:18:0:28:./.:0:0:0:0:1/1:0:35:./.:.:.:.:.:.
chr3	32102050	HG2_PB_SVrefine2Falcon1plusDovetail_7896	CCCACTCTTCATCTCCAATTGTCTCCAAGCATTCTCTTCCATTGCAGCCAGAATTAAGTTCAAACAGGCAAATTTGATTGTGTTGCTCCCCAGCTTTTAAAAAAACCCACTTCCATGGGCAGGCACAGTGGCTCATGCCTGTAATCCCAGTACTTTGGGAGGCCGAGCTGGGTGGATCACCTGAGGTCGGGAGTTCGCAACCACCCTGACCAACGTGGAGAAACCCCATCTCTACTAAACCCCATCTCTACTCAAAATACAAAATTAGCCAGCCGTGGTGGCAATCTCAGCTGTAATCTCAGCTACTCGGGAGGCTGAGGCGGGAGAACCGCTTGAACCTGGGAGGCGGAGGTTTCGGTGAGCCGAGATCACACCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCGCCTCAAAAAAAAAAAAAAAACCCTCAGAGGACCCCCTGCTCCTGCTCTGTCCCTCGACACAATCACCCCTCTTCAGTTCCTCAAACAAGCCCCATTCTTTCCCCTCCCAGACCTCACACATCACTCTCTTCCTCTTATCTCACCAACTCATGTGCTTCCTCAGGCACTTCTTCAAGAAGTCCTCTATTGAAGCTAAACTGAGTTAGGCCCTTCTGCTCTGTCCCCTGAGCACCCCACAGCTCCCCTCTCACCTTATTGTAACTCTTTGTTTAATATCTGTCTTTCAGATAAACTATAAGCACTGTGGGTACAAGGAAGGCATCTTCCCTTGCACTGCTATATGTCTAGTACCCAGCCCAGGCCACCTGGTAGGAGCTCAATATATATTTATTATATAAGTGAGAGATGAGATGAATGACTGCTTCTTTAATGAAAGTTATTTATCGATTATGATAAAATACTTCATGGGCACTATTTAAGGTGAAGCCCTTGAGGAAAACCTTAAGGTCCTCTACATTCTAAAACTCGTTCAATGAATGCATTCTCCATACCAAAGGAGGGTGCAAGTCTTGCACACGGGTTGCTGGGTCTAGCAACTTCTTTTTTATTTTATTTTTTATTTTTTTGAGAAAAAAGAAGAGAAGAGGAAGAGAAGCAAAGAGGATCAATCCTTTTTTGTTTTTTAAGACAGGGTCTCAGTCTGTGGCCCAGGCTGGAGTACAGTGGCACAATGATCACAGCTCACTGCAGCCTTGACCTCTCAGGCTGAAGCCATCCTCCCACCTCAGCCTCCTAAGTAGCTGGGACTACAGGCTTGTGCCACCATGCCTGACTTATTTTTTTATTTTTTATAGAGCCAGAGTCTTACTGTGTTGAGCAGGCTGGCCTCAAACTCTTGAGCTCGAGGAATCCTCCTGCCTCAGTCTCCCAAAATGCTGGGATCACAGACATGAGCCACTATGTCAAGCTATATTGTTATTTTTCACTTTTTAATTTTTTTTCAAATATTTTCCAACCATGGTTGGTTGAATATGCAGATGCAGTATCAACGGACATGGAGACCCAACTACAGGTCCTTTTTTATAAGGTTCTCTTTAATCTATGGTATGGTTTATTGGTTTTTTGTTGTTGTTGTTTTTTGTTTTGTTTTGTTTTTGAGACAGAGTCTCGCTCTATGGCCCAGGCTGGAATGCAGTGGCACAATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGAGATTCTGCCTCAGCCTCCCAAGTAGCTGGGAATACAGGCATGCACCATTACACCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGCTTTCACCATGTTGGCCAGGCTGGTGTTGAATTCCTGACCTCAGGTGACCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCACTCCTGGTTTGTTTATATGGCTATGTTTGTATGGCCCAGTATGTTTGTATGGCTATGGTATGTTTTTATCTGATGGTAATTTCACTATAGGATTTCAGTTGTATTTTCAATCACAATCTCTGATGTTTGTTTAATATAAGCTATCTTTACGATTTAGAAAGTCCTTTCATGCTGGTCCAGACAAAACTCTGAGCGCAGATAGGGAAACTTGCCTAAGGATACAGAGCTCAAAAGGGGACAGCAAGGGCTGGGAGCATGGGCTTCTTGAATCAGACCTGGATTTGTGCTAATGTAGCCAACAGCCTGGCATTGCCAGGCTACCAGCAAAGGACTTGTGGATGTATTATGGATTTCCAGACAAACAGGACAGTAGCATTTGTCAATGTTCAAATCCTTAATCTCCTATTTTTATCCCCCAACAGGTTTTGCAAATCTTTGAAATTTAAAAATAAAAGCCATTCCTGCTATTTTTAAAGCTGTTTCAGAGGTACGCAAGATAATCAATCCTTTAAAATAGAAAGTCTTCCTTTTTCCACTACTTCTTACTTTTAATGTACTGCCCGAGTACAAATCCTGATATTGTCATGTATCTTGGATAACGTCAATCCACAGCAGTTTAGGTACTGAAAATATTTATGTATTCCCTGGTCTTGATGAGCATAAGAGCAATCTTTCCAAGACCTTGCAGTGGGATGTAATAAAACTTGAATTGCAGTCCTGAATCATTTCTGGGTTCAACTTTGTCTCTTGGTAGCTGAATCGACTTGGACATGTTTCAAGAGTAGAATAACACAATGTTACATTCCCCCTGGAGGAGGAATAATACTTATCCAGCTCTCAGGGGAGAGTGGTTGCTGACTATTTTCAGCCTCAGGAAGAATGAACCACTTCCCATTTAATCCTGCAGTGGGACAGGTCAGGGATGGGGAAGCAAGGGGTTTAGAGCCACATGTTGAAGACTAGGAAGGCTTCTAGGTAGAAGTTCAGAGTTCAGCTTCTTGGCTCCACAGCTCAGGAACTTTGAGCTTTCACATATCAAAGAGTGTTGATGCCCAGGGTGAACAGACCAACACTAGGGGTGGAGGGCAGAACCTTCCTCGTCAAATTTTTAAGGAAGATTCAGTGCAAATTTGGCCCTGGGCTATCAGGGAGATGTAGGCAAGTGACATGTAGGTGTTTGAGTCTGATATGGTTTGGTTCTGTGTCCCCACCCAAATCTCATCTTGAATTGTAATCCCTATATGTGAAGGGAGGGACCTGGTGGGAGGTGATTGGATCATGGGGGCAGTTTCCCCCATGCTGTTTTCATGATAGGGAGTGAGTTTTCACAAGATCTGATGGTTTAAAAGTGTTTGGCAGTTCCCCACTTTCTCGCTGTCTCTCCCCTGCTGCCACGTAAGACGTGCCTTGCTTCCTGTTCATCCTCTGCCACGATTGTAAGTTTCCTAAGGCCTCCCTAGCTATGTGGAACCGTGAGTCAATTAAACCTCTTTTCTTTGTAAATTACCCAGTCTCAGGTAGTTCTTTATAGCAGTGTGAAAATGGACTAATACAGTCTCATGTTTTTTGTTTTGTTTTGTTTTCTGGGACAGGGGTCTCACTGTGTTGCCCAGGCTGGAATGCAGTGGCATGCTCACAGCTTACTGCAGTGTCGACCTCCTAGGCTCAAGCAATCCTCCCACCTCAGCCTCCCTAGTAGCTGGACCACAGGCATGAGCCACCACACACAGCTAATTTTTGTATTTTTTTCAGAGACAGGGTTTCACCAATGTTGCCCAGACTGGAGTCGAACTCCTGGGCTCAAGCCATCCATCCACCTTGGCTTCCCAAAGTGCTAGGATTACAGGCATGAGCCACCACACCTGGCCAGTATTTCTTTTTTTATACCAGATATGTGCTATTTGAAAACTATTTCATTATCTTTATCATCATCATTCACCTATGTCACATCAGATTTCTGTCTCTGCAAACATGTTGATATACAAACTAATATGAAGCCCTGATATTTCACCATCTTTTCAGGAGTGTTAGATGTCAACCTGAAATAATCAAAAGGGTCAGAATGTAGCTTAAAGAGAATGTATTCAAGCACAAATGTTGAGGACTGCAGCTAGGGACATGCTTCCAAATTGCCTTGGTGAATGCTTGGAAAAACAAAAGAGAATCTCAAGTTTTTAAAGAAAAAAAAAGATGAATCAGGAGAGGAGACGATTATAAAAGTTGTTCATCAGGCATTCTCATTGGTTTACAGAAATAACATTGACTCGTGATTGGCTTGTGTTGAATTACAGGTTGCATGGCATTTTATGGCTACTTGATGTCAGTTAGTCTAGAGCCCAAATAGCAAGTGGCTTCAAGAAGTAATGATTTAGCTCAAGGGGAAGTGCTACATAACTGCTGTTACATTTTAAATGCCTTGCTGGGCCTCATAATTTAAAGGGCTCACATTTCCTAGATACATGTGTGTTTTTTTGTTTTTTTCCCCCTTTCTCTTAGGCATGCCTAAAATCTCCTTTTTCTTCTTCTTAGGTAAAACATGACTATTTGCAGATTTCTGAAAATCAGTGCTCGAAACATTTCTTTTTTCCTTTTTCTGTTAAATCAGTGAAAGAAAATTATAATCAATTTCTTTCTTGGCTAATCTCTTCCTGAGTAATTTTTCTTTCTTTTTAAATAGCTCCTTATCTGCAGCTTTTCTAAAAGTGTTCAATTCTGACTGTTTCATTTCACTGGATATGATGGCTTTTTACATGGAACACTCCACTCTCTGAAAAGTTCTTCATGTACTTTTTCAAGTGGTATAAAATGACACTTGAAGAGTCTTTTACCAAAAAGGCGGTTCATTGTTTTGGCAACTTAGCAATATCATTAGACTCAAACTCCACAAAAGCATAGTTTTGGCATTTTCAGGCTTTCCACTTCTGGAGAGCTTGAATCTTGTAATCATGTCATACTTGGAGAAATATGCTCAGATCTGGGTTTCATAAAGCGCTGGAGGTATGTGACCTACACAGATAACTCCAGAAGACAGTTTTTCTTGCTCCTGTCATTGGGCTGACAAAGACTCTATCCTTTGAGCAGAACTTTGGCCAGGCTCCTCTGAGGCCTCTGCTTGACTAGGCCTGCCCTTGGGCTTCTCTCTCTGTCCTTGTAGAATCCAGTTTGAGCAAGAATCCTGTGTAGTCAGTTTAATAAAAATCCCCAGGTCAGGCACAGTGGCTCACTCCTATAATCCCCCCGCTTTGAGAGCCTGAGGCAGGTGGATCACTTGAGGCCCAGAGTTCAAGACCAGCCTTGCCAACATGGTGAAACTCCATCTCTACAAAAAATACAAAAATCAGCCAGGCATGGTGGCATCTGTCTGTGGTCCCAGCTACTTGGGAGGCTGAAGCCAAAGGATCGCTTGAGCCCAGGAGGCCTAGGTTGCAAGGTTGCAGTCAGCAGAGACTGCACCACTAGACTCCAGCCTGGGCAACGGAGCAAGAGAAGAGAGAAAGAGAGACAGAAAGAGAGAGAAAGAAGGAAGAAAGAAAGAAGGAAAGAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAAAGAGAAAGAGAAGGTTGCAAGGTTGCAGTGAGCAGAGATTGCGCCACTAGACTCCAGCCTGGGCGACAGAGCAAGACCCTGAAGAAAGAGAGAGAGAAAGGGAAGAAAGGAAGAAAGGAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGACATCCCCCACCCTTGCAATCTGACCACCCTCACTATATTATCACCCTAGCCTGCCTTCAGCAATAATCCTTTCAAGTCAGTTTAGCCAGAAACCTCTTATCCTTGATATTTCCCCTTAGTAATTTTCCATCCACTGCCCCTACCCTGCTCTTTGGTTATAAATCTCCACTTGT	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3352:HG2_10X_allpass_480:HG4_PB_assemblyticsfalcon_17010:HG4_10X_allpass_569:HG3_PB_assemblyticsfalcon_17322:HG2_PB_assemblyticsPBcR_16795:HG3_10X_allpass_600:HG4_Ill_Krunchall_4546:HG3_Ill_Krunchall_4328:HG2_Ill_Krunchall_4343:HG2_PB_assemblyticsfalcon_17382:HG4_PB_pbsv_3159:HG4_PB_SVrefine2Falcon1Dovetail_1900:HG4_Ill_SVrefine2DISCOVARDovetail_2329:HG4_Ill_MetaSV_3321:HG4_Ill_GATKHCSBGrefine_2182:HG3_PB_pbsv_3117:HG3_PB_SVrefine2Falcon1Dovetail_1961:HG3_Ill_SVrefine2DISCOVARDovetail_2334:HG3_Ill_GATKHCSBGrefine_2095:HG2_PB_pbsv_3149:HG2_PB_SVrefine2PBcRplusDovetail_7311:HG2_PB_SVrefine2PB10Xhap12_2316:HG2_PB_SVrefine2Falcon2Bionano_1413:HG2_PB_SVrefine2Falcon1plusDovetail_7896:HG2_Ill_SVrefine2DISCOVARplusDovetail_8389:HG2_Ill_MetaSV_3191:HG2_Ill_GATKHCSBGrefine_2092:HG2_10X_SVrefine210Xhap12_2370:HG2_Ill_breakscan11_437:HG2_Ill_tnscope_325;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2370:HG2_Ill_GATKHCSBGrefine_2092:HG2_Ill_MetaSV_3191:HG2_Ill_SVrefine2DISCOVARplusDovetail_8389:HG2_PB_SVrefine2Falcon1plusDovetail_7896:HG2_PB_SVrefine2Falcon2Bionano_1413:HG2_PB_SVrefine2PB10Xhap12_2316:HG2_PB_SVrefine2PBcRplusDovetail_7311:HG2_PB_pbsv_3149:HG3_Ill_GATKHCSBGrefine_2095:HG3_Ill_SVrefine2DISCOVARDovetail_2334:HG3_PB_SVrefine2Falcon1Dovetail_1961:HG3_PB_pbsv_3117:HG4_Ill_GATKHCSBGrefine_2182:HG4_Ill_MetaSV_3321:HG4_Ill_SVrefine2DISCOVARDovetail_2329:HG4_PB_SVrefine2Falcon1Dovetail_1900:HG4_PB_pbsv_3159;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0210562;ClusterMaxSizeDiff=0.0210562;ClusterMaxEditDist=0.0210562;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-5833;DistBack=6031;DistForward=45834;DistMin=6031;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=3:32102051-32107885;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2482.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:110:1/1:0:8:0:9:./.:0:0:0:0:1/1:0:29:1/1:0:387:5735:.:.
chr3	32153718	HG2_PB_SVrefine2Falcon2Bionano_1414	TCAATACTTTGGGAGGCTGAGGTGGAGAATCATTTGAGCCCCACAATTTGAGTCCAGCCTGAGAAACATAGCAAGACCCTGTCTCTAAATCTAAAAAATAAATAAATAAAATATAAATAAAACTCATGGCCGGGCGCAGTGGCTCATGCCTGTAATCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_3150:HG4_PB_HySA_4744:HG4_PB_assemblyticsfalcon_17011:HG4_PB_SVrefine2Falcon1Dovetail_1901:HG4_Ill_Krunchall_4547:HG2_PB_assemblyticsfalcon_17383:HG4_PB_pbsv_3160:HG2_PB_assemblyticsPBcR_16796:HG4_Ill_Spiral_250:HG2_Ill_Spiral_213:HG4_Ill_MetaSV_3322:HG2_PB_HySA_5924:HG4_Ill_svaba_3999:HG4_Ill_scalpel_2969:HG4_Ill_manta_764:HG4_Ill_SVrefine2DISCOVARDovetail_2330:HG4_Ill_GATKHCSBGrefine_2183:HG2_PB_SVrefine2PBcRplusDovetail_7312:HG2_PB_SVrefine2PB10Xhap12_2317:HG2_PB_SVrefine2Falcon2Bionano_1414:HG2_PB_SVrefine2Falcon1plusDovetail_7897:HG2_Ill_svaba_3897:HG2_Ill_scalpel_3055:HG2_Ill_breakscan11_438:HG2_Ill_SpiralSDKrefine_10885:HG2_Ill_SVrefine2DISCOVARplusDovetail_8390:HG2_Ill_MetaSV_3192:HG2_Ill_GATKHCSBGrefine_2093:HG2_10X_allpass_481:HG2_10X_SVrefine210Xhap12_2371;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2371:HG2_10X_allpass_481:HG2_Ill_GATKHCSBGrefine_2093:HG2_Ill_MetaSV_3192:HG2_Ill_SVrefine2DISCOVARplusDovetail_8390:HG2_Ill_SpiralSDKrefine_10885:HG2_Ill_breakscan11_438:HG2_Ill_scalpel_3055:HG2_Ill_svaba_3897:HG2_PB_SVrefine2Falcon1plusDovetail_7897:HG2_PB_SVrefine2Falcon2Bionano_1414:HG2_PB_SVrefine2PB10Xhap12_2317:HG2_PB_SVrefine2PBcRplusDovetail_7312:HG4_Ill_GATKHCSBGrefine_2183:HG4_Ill_SVrefine2DISCOVARDovetail_2330:HG4_Ill_manta_764:HG4_Ill_scalpel_2969:HG4_Ill_svaba_3999;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0127389;ClusterMaxSizeDiff=0.0126582;ClusterMaxEditDist=0.0444444;PBcalls=12;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-157;DistBack=45834;DistForward=3374;DistMin=3374;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=53;REFWIDENED=3:32153688-32153897;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:0|1:25:2:1:31:./.:0:0:0:0:0/1:28:15:./.:.:.:.:.:.
chr3	32203861	HG4_10X_allpass_570	ACCTTAATTACCTTTTCTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2374:HG4_Ill_Spiral_251:HG2_Ill_Spiral_214:HG3_PB_HySA_4839:HG2_PB_HySA_5926:HG3_Ill_Krunchall_4329:HG2_Ill_Krunchall_4345:HG4_Ill_Krunchall_4551:HG2_PB_SVrefine2PB10Xhap12_2321:HG2_PB_SVrefine2Falcon1plusDovetail_7899:HG3_Ill_MetaSV_3354:HG2_PB_pbsv_3152:HG4_PB_pbsv_3162:HG4_PB_SVrefine2Falcon1Dovetail_1903:HG4_Ill_manta_765:HG4_Ill_MetaSV_3324:HG4_Ill_GATKHCSBGrefine_2185:HG4_10X_allpass_570:HG3_PB_pbsv_3119:HG3_PB_SVrefine2Falcon1Dovetail_1963:HG3_Ill_SVrefine2DISCOVARDovetail_2337:HG3_10X_allpass_601:HG2_PB_SVrefine2PBcRplusDovetail_7314:HG2_PB_SVrefine2PB10Xhap12_2320:HG2_PB_SVrefine2Falcon2Bionano_1416:HG2_Ill_SVrefine2DISCOVARplusDovetail_8392:HG2_Ill_MetaSV_3193:HG2_Ill_GATKHCSBGrefine_2095:HG2_10X_allpass_482;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2374:HG4_PB_pbsv_3162:HG4_PB_SVrefine2Falcon1Dovetail_1903:HG4_Ill_manta_765:HG4_Ill_MetaSV_3324:HG4_Ill_GATKHCSBGrefine_2185:HG4_10X_allpass_570:HG3_PB_pbsv_3119:HG3_PB_SVrefine2Falcon1Dovetail_1963:HG3_Ill_SVrefine2DISCOVARDovetail_2337:HG3_10X_allpass_601:HG2_PB_SVrefine2PBcRplusDovetail_7314:HG2_PB_SVrefine2PB10Xhap12_2320:HG2_PB_SVrefine2Falcon2Bionano_1416:HG2_Ill_SVrefine2DISCOVARplusDovetail_8392:HG2_Ill_MetaSV_3193:HG2_Ill_GATKHCSBGrefine_2095:HG2_10X_allpass_482;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0424028;ClusterMaxSizeDiff=0.0424028;ClusterMaxEditDist=0.045614;PBcalls=12;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-282;DistBack=-298;DistForward=2735;DistMin=-298;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:32203862-32204159;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:22:0|1:25:1:1:19:./.:0:0:0:0:0/1:43:13:./.:.:.:.:.:.
chr3	32420581	HG3_Ill_GATKHCSBGrefine_2096	TCCAGGAATTCGAGACCAGCCTGGGCAGCATAGCAAGACCCTGTCTCTATAAAAAAAAAAATAATTACAACAGAAAAATTAGCCTAGTGCGGTAGCACACGCCTATAGTCTCAACTACTTGAGAGGCTGAGATGGGAGGATTGCTTGAGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2375:HG4_Ill_manta_766:HG3_Ill_manta_700:HG4_Ill_Spiral_252:HG3_Ill_Spiral_3384:HG2_Ill_Spiral_215:HG4_Ill_Krunchall_4553:HG3_Ill_Krunchall_4331:HG2_Ill_Krunchall_4347:HG3_PB_HySA_4843:HG2_PB_HySA_5930:HG2_Ill_MetaSV_3194:HG4_PB_pbsv_3163:HG4_Ill_scalpel_2975:HG4_Ill_MetaSV_3325:HG4_Ill_GATKHCSBGrefine_2186:HG4_Ill_250bpfermikitraw_4330:HG4_Ill_150bpfermikitraw_4146:HG4_10X_allpass_571:HG3_Ill_scalpel_3186:HG3_Ill_MetaSV_3355:HG3_Ill_GATKHCSBGrefine_2096:HG3_10X_allpass_602:HG2_Ill_scalpel_3057:HG2_Ill_GATKHCSBGrefine_2096:HG2_10X_allpass_483:HG3_PB_pbsv_3120:HG2_PB_pbsv_3153:HG4_PB_SVrefine2Falcon1Dovetail_1904:HG4_Ill_SVrefine2DISCOVARDovetail_2332:HG3_PB_SVrefine2Falcon1Dovetail_1964:HG3_Ill_SVrefine2DISCOVARDovetail_2339:HG2_PB_SVrefine2PBcRplusDovetail_7315:HG2_PB_SVrefine2PB10Xhap12_2322:HG2_PB_SVrefine2Falcon2Bionano_1417:HG2_PB_SVrefine2Falcon1plusDovetail_7900:HG2_Ill_SVrefine2DISCOVARplusDovetail_8393;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_483:HG2_Ill_GATKHCSBGrefine_2096:HG2_Ill_scalpel_3057:HG3_10X_allpass_602:HG3_Ill_GATKHCSBGrefine_2096:HG3_Ill_MetaSV_3355:HG3_Ill_scalpel_3186:HG4_10X_allpass_571:HG4_Ill_150bpfermikitraw_4146:HG4_Ill_250bpfermikitraw_4330:HG4_Ill_GATKHCSBGrefine_2186:HG4_Ill_MetaSV_3325:HG4_Ill_scalpel_2975:HG4_PB_pbsv_3163;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0199336;ClusterMaxSizeDiff=0.0199336;ClusterMaxEditDist=0.0728477;PBcalls=11;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-149;DistBack=17802;DistForward=-143;DistMin=-143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=63;REFWIDENED=3:32420532-32420743;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2485.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:2:15:0:17:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr3	32806536	HG3_Ill_SVrefine2DISCOVARDovetail_2340	TGCCAGGCACAGTGGCTCATGCCTCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCATGAGGTCAGGAGTTTGAGACCAGCCTGGCCAATATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGTTGGTGGCACGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATCGCTTGAATCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATTGTGCCACTGTACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGATGTTTAAATTTCAAATCAGCAGAATAAAAAGCAACTTGGGGCCGGGCACAGTGGCTCACATCTGTAATCCCACACTCTGGGAGGCTGAGACAGGCAGATCACTTGAGTCCAGGGGTTTGAGACCAGCCTGGGCAACATAATGAGACCCTGTCTCTACTAAAAATACCAAAAATTAGCCAGGCATGGTGGTGCATTCCTGTAGTCCCAGATACTTAGGAGACAGAGGTAGGAGGATTACCTGAGCCTGGGAGGTTGAGGCTGTAGTCAGCCAAGATCATGCCACTGCACTCCAGCCTGGGCAACTGGAGTGAGACCCTGTCCCCCCAAAAAAAAAAGACAAAAGAAGTAAGTTGACAGTTTTAATTATTAAAATTCCAAAAGATGGAAAACTGTCTAAAAGATCACTTATATAAATAATAGTGCATCTGTACAGTTGAAGACAATGCAGCTATAAACTCTAGGTACTAAAATGGAAAGATGTCCAAGACATACTAAATGAAAACAGCAAGGTGTGAAACAGTTTCTGTATAACCCTGTATACATGCATAAAAGATCTCTGAAAGGACACACCAAGAAACTGCAAACATTAGTTGTTGGGGTGGCAGGACGAATACTACATGGCTGGAGCAGTAGAATGGGAGACTTTTCACTGTATACTGTTATGCTTTTAATTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTTGTTGCCCAGACTGGAGTGCAATGGCGCAATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAACACTTCTCCTGCGTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTACCACCACGCCCGGCTAATTTTGTATTTTTAATAGAGACGGGGTTTCTCCATGTTGAGGCTGGTCTCGAACTCCTGGCCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCCAGGTGCTTTTAAATTTTGAATTGTGTAAATCTTTTTTCAAAATGTGAATTATAG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2376:HG2_10X_allpass_484:HG3_10X_allpass_603:HG4_10X_allpass_572:HG3_PB_pbsv_3123:HG4_PB_pbsv_3169:HG2_PB_pbsv_3157:HG2_Ill_SpiralSDKrefine_10889:HG2_Ill_MetaSV_3195:HG2_Ill_GATKHCSBGrefine_2099:HG4_Ill_MetaSV_3326:HG3_Ill_MetaSV_3357:HG4_PB_pbsv_3168:HG4_PB_SVrefine2Falcon1Dovetail_1908:HG3_PB_SVrefine2Falcon1Dovetail_1966:HG3_Ill_SVrefine2DISCOVARDovetail_2340:HG2_PB_SVrefine2PBcRplusDovetail_7317:HG2_PB_SVrefine2PB10Xhap12_2324:HG2_PB_SVrefine2Falcon2Bionano_1421:HG2_PB_SVrefine2Falcon1plusDovetail_7901:HG2_Ill_SVrefine2DISCOVARplusDovetail_8394;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2376:HG4_PB_pbsv_3168:HG4_PB_SVrefine2Falcon1Dovetail_1908:HG3_PB_SVrefine2Falcon1Dovetail_1966:HG3_Ill_SVrefine2DISCOVARDovetail_2340:HG2_PB_SVrefine2PBcRplusDovetail_7317:HG2_PB_SVrefine2PB10Xhap12_2324:HG2_PB_SVrefine2Falcon2Bionano_1421:HG2_PB_SVrefine2Falcon1plusDovetail_7901:HG2_Ill_SVrefine2DISCOVARplusDovetail_8394;NumExactMatchSVs=10;ClusterMaxShiftDist=0.234208;ClusterMaxSizeDiff=0.234208;ClusterMaxEditDist=0.234208;PBcalls=10;Illcalls=7;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1307;DistBack=77591;DistForward=-1023;DistMin=-1023;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=294;REFWIDENED=3:32806537-32808137;PctSeqSimilarity=0.9279;PctSizeSimilarity=0.9939;PctRecOverlap=0.8343;SizeDiff=-8;StartDistance=-210;EndDistance=-218;GTMatch=0;TruScore=91;MatchId=2486.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:2:57:1/1:2:26:0:12:./.:0:0:0:0:0/0:43:0:0/1:29:65:1283:.:.
chr3	32940758	HG2_10X_SVrefine210Xhap12_2377	ATCCAAGAGGATTGATGACATGTCCACACAAAAACTAGTACATGAATGTTCATAGCAACATGATTCATAATAGCCCCAAATGCAGGCAACCCAAATT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_3124:HG4_PB_pbsv_3170:HG3_PB_assemblyticsfalcon_17327:HG2_PB_assemblyticsfalcon_17390:HG2_PB_assemblyticsPBcR_16803:HG4_PB_SVrefine2Falcon1Dovetail_1909:HG4_Ill_Spiral_254:HG2_PB_HySA_5938:HG2_Ill_Spiral_216:HG3_PB_HySA_4846:HG4_Ill_svaba_4006:HG4_Ill_scalpel_2978:HG4_Ill_manta_767:HG4_Ill_SVrefine2DISCOVARDovetail_2333:HG4_Ill_MetaSV_3327:HG4_Ill_Krunchall_4558:HG4_Ill_GATKHC_5218:HG4_Ill_GATKHCSBGrefine_2188:HG4_Ill_250bpfermikitraw_4335:HG4_Ill_150bpfermikitraw_4152:HG4_CG_vcfBeta_2080:HG3_PB_SVrefine2Falcon1Dovetail_1967:HG3_Ill_svaba_4029:HG3_Ill_manta_701:HG3_Ill_SVrefine2DISCOVARDovetail_2341:HG3_Ill_Krunchall_4335:HG3_Ill_GATKHC_5239:HG3_Ill_GATKHCSBGrefine_2097:HG3_Ill_250bpfermikitraw_4205:HG3_Ill_150bpfermikitraw_4075:HG3_CG_vcfBeta_1794:HG3_10X_allpass_604:HG2_PB_pbsv_3158:HG2_PB_SVrefine2PBcRplusDovetail_7318:HG2_PB_SVrefine2PB10Xhap12_2325:HG2_PB_SVrefine2Falcon2Bionano_1422:HG2_PB_SVrefine2Falcon1plusDovetail_7902:HG2_Ill_svaba_3902:HG2_Ill_scalpel_3060:HG2_Ill_manta_886:HG2_Ill_SpiralSDKrefine_10892:HG2_Ill_SVrefine2DISCOVARplusDovetail_8395:HG2_Ill_Krunchall_4351:HG2_Ill_GATKHC_5135:HG2_Ill_GATKHCSBGrefine_2100:HG2_Ill_250bpfermikitraw_4281:HG2_Ill_150bpfermikitraw_3969:HG2_CG_vcfBeta_1891:HG2_10X_SVrefine210Xhap12_2377:HG4_PB_assemblyticsfalcon_17019:HG2_Ill_breakscan11_439;NumClusterSVs=51;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2377:HG2_CG_vcfBeta_1891:HG2_Ill_150bpfermikitraw_3969:HG2_Ill_250bpfermikitraw_4281:HG2_Ill_GATKHCSBGrefine_2100:HG2_Ill_GATKHC_5135:HG2_Ill_Krunchall_4351:HG2_Ill_SVrefine2DISCOVARplusDovetail_8395:HG2_Ill_SpiralSDKrefine_10892:HG2_Ill_manta_886:HG2_Ill_scalpel_3060:HG2_Ill_svaba_3902:HG2_PB_SVrefine2Falcon1plusDovetail_7902:HG2_PB_SVrefine2Falcon2Bionano_1422:HG2_PB_SVrefine2PB10Xhap12_2325:HG2_PB_SVrefine2PBcRplusDovetail_7318:HG2_PB_pbsv_3158:HG3_10X_allpass_604:HG3_CG_vcfBeta_1794:HG3_Ill_150bpfermikitraw_4075:HG3_Ill_250bpfermikitraw_4205:HG3_Ill_GATKHCSBGrefine_2097:HG3_Ill_GATKHC_5239:HG3_Ill_Krunchall_4335:HG3_Ill_SVrefine2DISCOVARDovetail_2341:HG3_Ill_manta_701:HG3_Ill_svaba_4029:HG3_PB_SVrefine2Falcon1Dovetail_1967:HG4_CG_vcfBeta_2080:HG4_Ill_150bpfermikitraw_4152:HG4_Ill_250bpfermikitraw_4335:HG4_Ill_GATKHCSBGrefine_2188:HG4_Ill_GATKHC_5218:HG4_Ill_Krunchall_4558:HG4_Ill_MetaSV_3327:HG4_Ill_SVrefine2DISCOVARDovetail_2333:HG4_Ill_manta_767:HG4_Ill_scalpel_2978:HG4_Ill_svaba_4006;NumExactMatchSVs=39;ClusterMaxShiftDist=0.0518135;ClusterMaxSizeDiff=0.0518135;ClusterMaxEditDist=0.0518135;PBcalls=15;Illcalls=31;TenXcalls=2;CGcalls=3;PBexactcalls=6;Illexactcalls=28;TenXexactcalls=2;CGexactcalls=3;HG2count=22;HG3count=14;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-96;DistBack=10808;DistForward=11585;DistMin=10808;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:32940759-32940857;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2487.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:58:1/1:5:21:1:10:./.:0:0:0:0:1/1:0:45:./.:.:.:.:.:.
chr3	33067065	HG4_Ill_250bpfermikitraw_4338	CGGAGCAGCTGCTGCCATCACGCTGGCTGTGGCGGAAGGAGGTCGTGGGCCGTGGCGGTG	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_4284:HG3_PB_assemblyticsfalcon_17330:HG3_PB_pbsv_3126:HG4_PB_assemblyticsfalcon_17022:HG2_PB_pbsv_3161:HG4_PB_pbsv_3172:HG4_Ill_SVrefine2DISCOVARDovetail_2336:HG4_Ill_250bpfermikitraw_4338:HG3_Ill_250bpfermikitraw_4207:HG3_Ill_150bpfermikitraw_4077:HG2_PB_SVrefine2PBcRplusDovetail_7321:HG2_PB_SVrefine2PB10Xhap12_2328:HG2_Ill_SVrefine2DISCOVARplusDovetail_8397;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4284:HG4_Ill_SVrefine2DISCOVARDovetail_2336:HG4_Ill_250bpfermikitraw_4338:HG3_Ill_250bpfermikitraw_4207:HG3_Ill_150bpfermikitraw_4077:HG2_PB_SVrefine2PBcRplusDovetail_7321:HG2_PB_SVrefine2PB10Xhap12_2328:HG2_Ill_SVrefine2DISCOVARplusDovetail_8397;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0338983;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=0;DistForward=15049;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=129;REFWIDENED=3:33067066-33067253;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2488.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:./.:13:11:7:6:./.:0:0:0:0:0/1:12:11:./.:.:.:.:.:.
chr3	33553189	HG4_Ill_SVrefine2DISCOVARDovetail_2341	TAAGAACACGTAAAAATAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_440:HG2_10X_allpass_485:HG4_Ill_Krunchall_4566:HG3_PB_assemblyticsfalcon_17332:HG4_Ill_Spiral_256:HG2_Ill_Spiral_217:HG4_10X_allpass_574:HG4_PB_pbsv_3174:HG2_PB_pbsv_3163:HG2_PB_HySA_5945:HG2_Ill_tnscope_326:HG4_PB_SVrefine2Falcon1Dovetail_1914:HG4_Ill_SVrefine2DISCOVARDovetail_2341:HG4_Ill_MetaSV_3329:HG4_Ill_GATKHCSBGrefine_2192:HG3_PB_SVrefine2Falcon1Dovetail_1971:HG2_PB_SVrefine2PBcRplusDovetail_7323:HG2_PB_SVrefine2Falcon2Bionano_1427:HG2_PB_SVrefine2Falcon1plusDovetail_7907:HG2_Ill_manta_888:HG2_Ill_MetaSV_3197:HG2_Ill_GATKHCSBGrefine_2103:HG2_10X_SVrefine210Xhap12_2380;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2380:HG2_Ill_GATKHCSBGrefine_2103:HG2_Ill_MetaSV_3197:HG2_Ill_manta_888:HG2_PB_SVrefine2Falcon1plusDovetail_7907:HG2_PB_SVrefine2Falcon2Bionano_1427:HG2_PB_SVrefine2PBcRplusDovetail_7323:HG3_PB_SVrefine2Falcon1Dovetail_1971:HG4_Ill_GATKHCSBGrefine_2192:HG4_Ill_MetaSV_3329:HG4_Ill_SVrefine2DISCOVARDovetail_2341:HG4_PB_SVrefine2Falcon1Dovetail_1914;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0398406;ClusterMaxSizeDiff=0.0398406;ClusterMaxEditDist=0.0398406;PBcalls=9;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-886;DistBack=29642;DistForward=-869;DistMin=-869;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=3:33553190-33554093;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:33:0|1:47:0:0:28:./.:0:0:0:0:0/1:31:7:0/1:58:27:.:.:.
chr3	35051657	HG2_10X_SVrefine210Xhap12_2384	ATATTTAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3331:HG4_PB_assemblyticsfalcon_17038:HG2_PB_assemblyticsPBcR_16818:HG3_PB_assemblyticsfalcon_17345:HG2_PB_assemblyticsfalcon_17405:HG4_Ill_Krunchall_4581:HG3_Ill_Krunchall_4353:HG2_Ill_Krunchall_4369:HG2_PB_HySA_5959:HG4_Ill_Spiral_258:HG2_Ill_Spiral_219:HG4_Ill_GATKHCSBGrefine_2202:HG3_Ill_GATKHCSBGrefine_2108:HG2_Ill_GATKHCSBGrefine_2109:HG4_PB_pbsv_3184:HG2_PB_PB10Xdip_20660:HG4_Ill_manta_771:HG2_Ill_tnscope_327:HG4_Ill_Spiral_257:HG3_Ill_Spiral_3402:HG2_Ill_Spiral_218:HG2_Ill_MetaSV_3199:HG4_PB_SVrefine2PBcRDovetail_1672:HG4_PB_SVrefine2Falcon1Dovetail_1917:HG4_Ill_scalpel_2999:HG4_Ill_SVrefine2DISCOVARDovetail_2351:HG4_Ill_GATKHCSBGrefine_2201:HG4_10X_allpass_576:HG3_PB_pbsv_3133:HG3_PB_SVrefine2Falcon1Dovetail_1975:HG3_PB_HySA_4864:HG3_Ill_scalpel_3200:HG3_Ill_SVrefine2DISCOVARDovetail_2350:HG3_Ill_MetaSV_3361:HG3_Ill_GATKHCSBGrefine_2107:HG3_10X_allpass_606:HG2_PB_pbsv_3168:HG2_PB_SVrefine2PBcRplusDovetail_7326:HG2_PB_SVrefine2PB10Xhap12_2332:HG2_PB_SVrefine2Falcon2Bionano_1433:HG2_PB_SVrefine2Falcon1plusDovetail_7910:HG2_Ill_scalpel_3075:HG2_Ill_manta_890:HG2_Ill_SVrefine2DISCOVARplusDovetail_8411:HG2_Ill_GATKHCSBGrefine_2108:HG2_10X_allpass_486:HG2_10X_SVrefine210Xhap12_2384:HG2_Ill_breakscan11_441;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2384:HG2_10X_allpass_486:HG2_Ill_GATKHCSBGrefine_2108:HG2_Ill_SVrefine2DISCOVARplusDovetail_8411:HG2_Ill_manta_890:HG2_Ill_scalpel_3075:HG2_PB_SVrefine2Falcon1plusDovetail_7910:HG2_PB_SVrefine2Falcon2Bionano_1433:HG2_PB_SVrefine2PB10Xhap12_2332:HG2_PB_SVrefine2PBcRplusDovetail_7326:HG2_PB_pbsv_3168:HG3_10X_allpass_606:HG3_Ill_GATKHCSBGrefine_2107:HG3_Ill_MetaSV_3361:HG3_Ill_SVrefine2DISCOVARDovetail_2350:HG3_Ill_scalpel_3200:HG3_PB_HySA_4864:HG3_PB_SVrefine2Falcon1Dovetail_1975:HG3_PB_pbsv_3133:HG4_10X_allpass_576:HG4_Ill_GATKHCSBGrefine_2201:HG4_Ill_SVrefine2DISCOVARDovetail_2351:HG4_Ill_scalpel_2999:HG4_PB_SVrefine2Falcon1Dovetail_1917:HG4_PB_SVrefine2PBcRDovetail_1672;NumExactMatchSVs=25;ClusterMaxShiftDist=0.126543;ClusterMaxSizeDiff=0.126543;ClusterMaxEditDist=0.126543;PBcalls=17;Illcalls=27;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=22;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=1486;DistForward=25740;DistMin=1486;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=3:35051658-35052003;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2490.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:1/1:0:19:1:36:./.:0:0:0:0:1/1:0:43:0/1:2:9:.:.:.
chr3	36108120	HG2_10X_SVrefine210Xhap12_2391	GCGTTTCTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_17051:HG4_Ill_GATKHCSBGrefine_2211:HG2_Ill_GATKHCSBGrefine_2116:HG2_PB_PB10Xdip_20667:HG2_10X_allpass_487:HG4_Ill_Krunchall_4593:HG2_Ill_Krunchall_4389:HG4_PB_pbsv_3192:HG2_PB_pbsv_3177:HG2_Ill_breakscan11_442:HG4_PB_SVrefine2PBcRDovetail_1678:HG4_PB_SVrefine2Falcon1Dovetail_1921:HG2_PB_SVrefine2PB10Xhap12_2338:HG2_PB_SVrefine2Falcon1plusDovetail_7916:HG2_10X_SVrefine210Xhap12_2391:HG4_Ill_MetaSV_3336:HG2_Ill_MetaSV_3202:HG4_Ill_Spiral_259:HG2_Ill_Spiral_220:HG4_Ill_scalpel_3008:HG4_10X_allpass_577:HG2_PB_HySA_5974:HG2_Ill_scalpel_3088;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2391:HG2_PB_SVrefine2Falcon1plusDovetail_7916:HG2_PB_SVrefine2PB10Xhap12_2338:HG4_PB_SVrefine2Falcon1Dovetail_1921:HG4_PB_SVrefine2PBcRDovetail_1678;NumExactMatchSVs=5;ClusterMaxShiftDist=0.208191;ClusterMaxSizeDiff=0.208191;ClusterMaxEditDist=0.208191;PBcalls=9;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-318;DistBack=-40;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:36108120-36108438;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2491.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:28:0|1:28:5:5:16:./.:0:0:0:0:0/1:25:16:0/1:22:5:.:.:.
chr3	38122945	HG2_PB_pbsv_3185	CAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCAGGGGGCTGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCG	C	20	PASS	ClusterIDs=HG4_Ill_GATKHCSBGrefine_2218:HG3_PB_assemblyticsfalcon_17370:HG3_PB_SVrefine2Falcon1Dovetail_1985:HG4_PB_SVrefine2Falcon1Dovetail_1925:HG4_PB_assemblyticsfalcon_17063:HG4_PB_SVrefine2PBcRDovetail_1683:HG3_PB_pbsv_3149:HG2_PB_SVrefine2PB10Xhap12_2345:HG3_10X_allpass_610:HG4_PB_pbsv_3201:HG2_PB_pbsv_3185:HG2_10X_allpass_488:HG4_Ill_MetaSV_3338;NumClusterSVs=13;ExactMatchIDs=HG2_PB_pbsv_3185:HG4_PB_pbsv_3201;NumExactMatchSVs=2;ClusterMaxShiftDist=0.156682;ClusterMaxSizeDiff=0.156682;ClusterMaxEditDist=0.184332;PBcalls=9;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-299;DistBack=-40;DistForward=-284;DistMin=-284;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=34;REFWIDENED=3:38122946-38123278;PctSeqSimilarity=0.963;PctSizeSimilarity=0.9901;PctRecOverlap=0.9373;SizeDiff=-3;StartDistance=-16;EndDistance=-19;GTMatch=0;TruScore=96;MatchId=2492.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:9:10:0|1:7:1:0:8:./.:0:0:0:0:0/1:44:8:0/0:18:1:.:4040:.
chr3	39260355	HG4_10X_allpass_580	ACGAAGCTCAGCCTGGTTCCACCAATGTTTCCTCAGGACTGGATTCACATTTGTGTTCTGGGAGTGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2401:HG4_PB_HySA_4813:HG4_PB_pbsv_3209:HG2_PB_pbsv_3192:HG4_PB_SVrefine2PBcRDovetail_1688:HG4_Ill_svaba_4063:HG4_Ill_manta_778:HG4_Ill_SVrefine2DISCOVARDovetail_2363:HG4_Ill_Krunchall_4627:HG4_Ill_GATKHC_5299:HG4_Ill_GATKHCSBGrefine_2222:HG4_Ill_Cortex_2334:HG4_Ill_250bpfermikitraw_4411:HG4_Ill_150bpfermikitraw_4222:HG4_10X_allpass_580:HG2_PB_SVrefine2PBcRplusDovetail_7341:HG2_PB_SVrefine2PB10Xhap12_2351:HG2_PB_SVrefine2Falcon2Bionano_1445:HG2_Ill_svaba_3956:HG2_Ill_manta_895:HG2_Ill_breakscan11_443:HG2_Ill_SpiralSDKrefine_10933:HG2_Ill_SVrefine2DISCOVARplusDovetail_8427:HG2_Ill_Krunchall_4414:HG2_Ill_GATKHC_5210:HG2_Ill_GATKHCSBGrefine_2129:HG2_Ill_Cortex_5523:HG2_Ill_250bpfermikitraw_4352:HG2_Ill_150bpfermikitraw_4034;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2401:HG4_PB_SVrefine2PBcRDovetail_1688:HG4_Ill_svaba_4063:HG4_Ill_manta_778:HG4_Ill_SVrefine2DISCOVARDovetail_2363:HG4_Ill_Krunchall_4627:HG4_Ill_GATKHC_5299:HG4_Ill_GATKHCSBGrefine_2222:HG4_Ill_Cortex_2334:HG4_Ill_250bpfermikitraw_4411:HG4_Ill_150bpfermikitraw_4222:HG4_10X_allpass_580:HG2_PB_SVrefine2PBcRplusDovetail_7341:HG2_PB_SVrefine2PB10Xhap12_2351:HG2_PB_SVrefine2Falcon2Bionano_1445:HG2_Ill_svaba_3956:HG2_Ill_manta_895:HG2_Ill_breakscan11_443:HG2_Ill_SpiralSDKrefine_10933:HG2_Ill_SVrefine2DISCOVARplusDovetail_8427:HG2_Ill_Krunchall_4414:HG2_Ill_GATKHC_5210:HG2_Ill_GATKHCSBGrefine_2129:HG2_Ill_Cortex_5523:HG2_Ill_250bpfermikitraw_4352:HG2_Ill_150bpfermikitraw_4034;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0151515;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.0454545;PBcalls=7;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=20;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-66;DistBack=20905;DistForward=-19;DistMin=-19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=132;REFWIDENED=3:39260356-39260553;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2493.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:28:0|1:35:8:0:13:./.:0:0:0:0:0/1:26:26:./.:.:.:.:.:.
chr3	41336680	HG3_Ill_GATKHCSBGrefine_2140	AATGGAGCAAACATAGTTTTTTCAAGAAATAGTGTTGGAACAACTGGATATCCACATGCAAAACATGAATGCAGACACAGATCTTTTACTCTCACAAAAATCAACTCAAAATGGATCACAGACCTAAATGTAAAATGCAAGACTTACAGACCTCAATGTGAAATGCAAAACTATAAAACTCCTAAAAGATAACATAGGAAAACAAATCTAGATGACCTCGGGTATGACAATGACTTTTTAGATACAACACCAAAGACATGATCCATGAAAGAAATAACTGATAAGCTGGGTTTTGTTAAAACTTAAAACTTCTGCCACAGACTGGGAGAAAATATTTGCAAAAGACACATCTGATAGACTGTTATAAAAAATACACAAAGAATTCTTAAAACTGAACAGTAAGAAAACAGTTGATAAAAAAAAAAAGCCAAAGACCATAACAGACACCTCACCAAAGAAGATATATAGATGGCAAATAAGCATATGAAAAGATGCTCCACATCGTTTGACATCAAGAAATGTAAATTAAAACAATGATATACCACTACAC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_3206:HG3_PB_assemblyticsfalcon_17399:HG3_PB_SVrefine2Falcon1Dovetail_1996:HG2_10X_allpass_489:HG3_PB_pbsv_3165:HG4_PB_assemblyticsfalcon_17095:HG4_PB_pbsv_3222:HG4_PB_SVrefine2PBcRDovetail_1694:HG4_PB_SVrefine2Falcon1Dovetail_1937:HG4_Ill_manta_780:HG4_Ill_SVrefine2DISCOVARDovetail_2373:HG4_Ill_MetaSV_3344:HG4_Ill_GATKHCSBGrefine_2232:HG4_10X_allpass_581:HG3_PB_SVrefine2PBcRDovetail_1574:HG3_Ill_manta_713:HG3_Ill_SVrefine2DISCOVARDovetail_2373:HG3_Ill_MetaSV_3371:HG3_Ill_GATKHCSBGrefine_2140:HG3_10X_allpass_614:HG2_PB_assemblyticsfalcon_17462:HG2_PB_assemblyticsPBcR_16882:HG2_PB_SVrefine2PBcRplusDovetail_7350:HG2_PB_SVrefine2PB10Xhap12_2361:HG2_PB_SVrefine2Falcon2Bionano_1452:HG2_PB_SVrefine2Falcon1plusDovetail_7931:HG2_Ill_manta_899:HG2_Ill_SpiralSDKrefine_10945:HG2_Ill_SVrefine2DISCOVARplusDovetail_8438:HG2_Ill_GATKHCSBGrefine_2141:HG2_10X_SVrefine210Xhap12_2408:HG3_Ill_Spiral_3452:HG2_Ill_tnscope_328:HG2_Ill_Spiral_222:HG2_Ill_MetaSV_3209:HG4_Ill_Krunchall_4644:HG3_Ill_Krunchall_4419:HG2_Ill_Krunchall_4431;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2408:HG2_Ill_GATKHCSBGrefine_2141:HG2_Ill_SVrefine2DISCOVARplusDovetail_8438:HG2_Ill_SpiralSDKrefine_10945:HG2_Ill_manta_899:HG2_PB_SVrefine2Falcon1plusDovetail_7931:HG2_PB_SVrefine2Falcon2Bionano_1452:HG2_PB_SVrefine2PB10Xhap12_2361:HG2_PB_SVrefine2PBcRplusDovetail_7350:HG2_PB_assemblyticsPBcR_16882:HG2_PB_assemblyticsfalcon_17462:HG3_10X_allpass_614:HG3_Ill_GATKHCSBGrefine_2140:HG3_Ill_MetaSV_3371:HG3_Ill_SVrefine2DISCOVARDovetail_2373:HG3_Ill_manta_713:HG3_PB_SVrefine2PBcRDovetail_1574:HG4_10X_allpass_581:HG4_Ill_GATKHCSBGrefine_2232:HG4_Ill_MetaSV_3344:HG4_Ill_SVrefine2DISCOVARDovetail_2373:HG4_Ill_manta_780:HG4_PB_SVrefine2Falcon1Dovetail_1937:HG4_PB_SVrefine2PBcRDovetail_1694:HG4_PB_pbsv_3222;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0109489;ClusterMaxSizeDiff=0.0109489;ClusterMaxEditDist=0.0127971;PBcalls=15;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-549;DistBack=3725;DistForward=10394;DistMin=3725;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:41336681-41337230;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2494.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:1:18:0:21:./.:0:0:0:0:1/1:0:24:0/1:3:16:.:.:.
chr3	42838356	HG4_Ill_GATKHCSBGrefine_2235	TAGAATCTTATAACTTCCGTCCCTCTCCCTCTCCCTCTCCCTCTCCGTCTCCCTCTCCGTCTCCCTCTCCCTCTCCCTCCTTCTCCGTCTCCGTCTCCGTCTCCGTCTCCGTCTCCCTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAACCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAGTGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCCGGCCGCCCAGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCACCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCAGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGAGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCTCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGCGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGGCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGACCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGCCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_444:HG4_10X_allpass_582:HG2_10X_allpass_491:HG3_10X_allpass_615:HG3_Ill_Krunchall_4430:HG4_PB_assemblyticsfalcon_17111:HG3_PB_assemblyticsfalcon_17413:HG2_PB_assemblyticsfalcon_17472:HG2_PB_assemblyticsPBcR_16895:HG2_Ill_tnscope_329:HG4_PB_pbsv_3226:HG4_PB_SVrefine2PBcRDovetail_1696:HG4_PB_SVrefine2Falcon1Dovetail_1940:HG4_Ill_SVrefine2DISCOVARDovetail_2379:HG4_Ill_MetaSV_3345:HG4_Ill_GATKHCSBGrefine_2235:HG3_PB_pbsv_3169:HG3_PB_SVrefine2PBcRDovetail_1575:HG3_PB_SVrefine2Falcon1Dovetail_1999:HG3_Ill_SVrefine2DISCOVARDovetail_2382:HG3_Ill_MetaSV_3372:HG3_Ill_GATKHCSBGrefine_2142:HG2_PB_pbsv_3209:HG2_PB_SVrefine2PBcRplusDovetail_7352:HG2_PB_SVrefine2PB10Xhap12_2363:HG2_PB_SVrefine2Falcon2Bionano_1454:HG2_PB_SVrefine2Falcon1plusDovetail_7933:HG2_Ill_SVrefine2DISCOVARplusDovetail_8448:HG2_Ill_MetaSV_3210:HG2_Ill_GATKHCSBGrefine_2144:HG2_10X_SVrefine210Xhap12_2412;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2412:HG2_Ill_GATKHCSBGrefine_2144:HG2_Ill_MetaSV_3210:HG2_Ill_SVrefine2DISCOVARplusDovetail_8448:HG2_PB_SVrefine2Falcon1plusDovetail_7933:HG2_PB_SVrefine2Falcon2Bionano_1454:HG2_PB_SVrefine2PB10Xhap12_2363:HG2_PB_SVrefine2PBcRplusDovetail_7352:HG2_PB_pbsv_3209:HG3_Ill_GATKHCSBGrefine_2142:HG3_Ill_MetaSV_3372:HG3_Ill_SVrefine2DISCOVARDovetail_2382:HG3_PB_SVrefine2Falcon1Dovetail_1999:HG3_PB_SVrefine2PBcRDovetail_1575:HG3_PB_pbsv_3169:HG4_Ill_GATKHCSBGrefine_2235:HG4_Ill_MetaSV_3345:HG4_Ill_SVrefine2DISCOVARDovetail_2379:HG4_PB_SVrefine2Falcon1Dovetail_1940:HG4_PB_SVrefine2PBcRDovetail_1696:HG4_PB_pbsv_3226;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0134831;ClusterMaxSizeDiff=0.0134831;ClusterMaxEditDist=0.0134831;PBcalls=15;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2454;DistBack=96721;DistForward=-2437;DistMin=-2437;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=3:42838357-42840827;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2495.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:91:1/1:1:20:0:28:./.:0:0:0:0:1/1:1:30:1/1:3:154:2380:.:.
chr3	43031092	HG3_Ill_svaba_4106	TACCTGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2414:HG2_10X_allpass_492:HG2_PB_assemblyticsfalcon_17474:HG2_PB_assemblyticsPBcR_16897:HG4_PB_assemblyticsfalcon_17114:HG3_PB_assemblyticsfalcon_17417:HG4_Ill_Krunchall_4656:HG2_Ill_Krunchall_4441:HG3_PB_HySA_4957:HG3_Ill_Spiral_3466:HG2_Ill_Spiral_223:HG4_PB_HySA_4838:HG2_PB_HySA_6052:HG4_Ill_MetaSV_3347:HG3_Ill_MetaSV_3373:HG2_Ill_tnscope_330:HG4_PB_pbsv_3228:HG4_PB_SVrefine2PBcRDovetail_1697:HG4_PB_SVrefine2Falcon1Dovetail_1942:HG4_Ill_svaba_4082:HG4_Ill_manta_781:HG4_Ill_SVrefine2DISCOVARDovetail_2382:HG4_Ill_GATKHCSBGrefine_2238:HG4_10X_allpass_583:HG3_PB_pbsv_3170:HG3_PB_SVrefine2PBcRDovetail_1577:HG3_PB_SVrefine2Falcon1Dovetail_2001:HG3_Ill_svaba_4106:HG3_Ill_manta_714:HG3_Ill_SVrefine2DISCOVARDovetail_2385:HG3_Ill_GATKHCSBGrefine_2144:HG3_10X_allpass_616:HG2_PB_pbsv_3210:HG2_PB_SVrefine2PBcRplusDovetail_7354:HG2_PB_SVrefine2PB10Xhap12_2365:HG2_PB_SVrefine2Falcon2Bionano_1456:HG2_PB_SVrefine2Falcon1plusDovetail_7935:HG2_Ill_svaba_3981:HG2_Ill_manta_900:HG2_Ill_breakscan11_445:HG2_Ill_SVrefine2DISCOVARplusDovetail_8450:HG2_Ill_MetaSV_3211:HG2_Ill_GATKHCSBGrefine_2146;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2414:HG4_PB_pbsv_3228:HG4_PB_SVrefine2PBcRDovetail_1697:HG4_PB_SVrefine2Falcon1Dovetail_1942:HG4_Ill_svaba_4082:HG4_Ill_manta_781:HG4_Ill_SVrefine2DISCOVARDovetail_2382:HG4_Ill_GATKHCSBGrefine_2238:HG4_10X_allpass_583:HG3_PB_pbsv_3170:HG3_PB_SVrefine2PBcRDovetail_1577:HG3_PB_SVrefine2Falcon1Dovetail_2001:HG3_Ill_svaba_4106:HG3_Ill_manta_714:HG3_Ill_SVrefine2DISCOVARDovetail_2385:HG3_Ill_GATKHCSBGrefine_2144:HG3_10X_allpass_616:HG2_PB_pbsv_3210:HG2_PB_SVrefine2PBcRplusDovetail_7354:HG2_PB_SVrefine2PB10Xhap12_2365:HG2_PB_SVrefine2Falcon2Bionano_1456:HG2_PB_SVrefine2Falcon1plusDovetail_7935:HG2_Ill_svaba_3981:HG2_Ill_manta_900:HG2_Ill_breakscan11_445:HG2_Ill_SVrefine2DISCOVARplusDovetail_8450:HG2_Ill_MetaSV_3211:HG2_Ill_GATKHCSBGrefine_2146;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0837209;ClusterMaxSizeDiff=0.0837209;ClusterMaxEditDist=0.0837209;PBcalls=18;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=26136;DistForward=21807;DistMin=21807;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=3:43031093-43031434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2496.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:9:1:39:./.:0:0:0:0:1/1:0:53:0/1:2:17:.:.:.
chr3	45717035	HG2_Ill_svaba_4001	CTATGAGAGCCACAAATTAAAGTCATGTATCATTTTAAGTTTTCTGGTAGTCACAATTAAAACGTTAAAGAAT	C	20	PASS	ClusterIDs=HG4_PB_HySA_4856:HG4_Ill_Spiral_262:HG2_Ill_Spiral_225:HG4_PB_pbsv_3239:HG2_PB_pbsv_3222:HG4_Ill_svaba_4102:HG4_Ill_manta_785:HG4_Ill_Krunchall_4680:HG4_Ill_GATKHCSBGrefine_2249:HG4_Ill_250bpfermikitraw_4457:HG2_PB_assemblyticsfalcon_17503:HG2_Ill_svaba_4001:HG2_Ill_manta_905:HG2_Ill_SpiralSDKrefine_10969:HG2_Ill_GATKHCSBGrefine_2156:HG2_Ill_250bpfermikitraw_4397:HG3_PB_SVrefine2Falcon1Dovetail_2006:HG2_PB_SVrefine2Falcon2Bionano_1460;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4397:HG2_Ill_GATKHCSBGrefine_2156:HG2_Ill_SpiralSDKrefine_10969:HG2_Ill_manta_905:HG2_Ill_svaba_4001:HG2_PB_assemblyticsfalcon_17503:HG4_Ill_250bpfermikitraw_4457:HG4_Ill_GATKHCSBGrefine_2249:HG4_Ill_Krunchall_4680:HG4_Ill_manta_785:HG4_Ill_svaba_4102;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0413793;ClusterMaxSizeDiff=0.0413793;ClusterMaxEditDist=0.0555556;PBcalls=6;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-72;DistBack=15957;DistForward=-7;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=3:45717029-45717175;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2497.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:35:0|1:23:5:2:11:./.:0:0:0:0:0/1:33:17:./.:.:.:.:.:.
chr3	45768351	HG2_10X_SVrefine210Xhap12_2421	TGCTTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2421:HG2_PB_pbsv_3223:HG2_10X_allpass_496:HG2_PB_SVrefine2PB10Xhap12_2371:HG2_PB_assemblyticsPBcR_16921:HG4_PB_pbsv_3240:HG2_Ill_Krunchall_4464:HG2_Ill_breakscan11_446:HG2_PB_HySA_6083:HG4_Ill_MetaSV_3353:HG2_Ill_tnscope_332:HG4_PB_SVrefine2PBcRDovetail_1701:HG4_PB_SVrefine2Falcon1Dovetail_1947:HG4_Ill_scalpel_3058:HG4_Ill_manta_786:HG4_Ill_GATKHCSBGrefine_2250:HG3_PB_assemblyticsfalcon_17438:HG3_PB_SVrefine2Falcon1Dovetail_2007:HG2_PB_SVrefine2PBcRplusDovetail_7359:HG2_PB_SVrefine2Falcon2Bionano_1461:HG2_Ill_scalpel_3135:HG2_Ill_SpiralSDKrefine_10970:HG2_Ill_SVrefine2DISCOVARplusDovetail_8465:HG2_Ill_MetaSV_3218:HG2_Ill_GATKHCSBGrefine_2157;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2421:HG4_PB_SVrefine2PBcRDovetail_1701:HG4_PB_SVrefine2Falcon1Dovetail_1947:HG4_Ill_scalpel_3058:HG4_Ill_manta_786:HG4_Ill_GATKHCSBGrefine_2250:HG3_PB_assemblyticsfalcon_17438:HG3_PB_SVrefine2Falcon1Dovetail_2007:HG2_PB_SVrefine2PBcRplusDovetail_7359:HG2_PB_SVrefine2Falcon2Bionano_1461:HG2_Ill_scalpel_3135:HG2_Ill_SpiralSDKrefine_10970:HG2_Ill_SVrefine2DISCOVARplusDovetail_8465:HG2_Ill_MetaSV_3218:HG2_Ill_GATKHCSBGrefine_2157;NumExactMatchSVs=15;ClusterMaxShiftDist=0.059098;ClusterMaxSizeDiff=0.059098;ClusterMaxEditDist=0.059098;PBcalls=11;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=40195;DistForward=17477;DistMin=17477;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=3:45768352-45768686;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2498.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:47:0|1:22:1:0:39:./.:0:0:0:0:0/1:24:22:0/1:28:5:.:.:.
chr3	46045873	HG2_PB_SVrefine2Falcon1plusDovetail_7944	CTGTAGGAGCCATCTGCCCCACCTCAAGAGTCAGGTCCTGCAAATCTCTAGCCAAGGCTTGCCCAAACAAATGGGAACTATCTGTGAAACCTTGTGGAAGCACTGTCCAGGTGAGCTGTTGATGCCTTGCTTTCTTATTCTCCTACTCAAATGCAAATAAAATTGGGAGGATGAGTCTAGGGAGATACGAAAGAAAGTGTCTTTGAGGTCTAAGACTGAAAACAACTGAGTATCTGGAGGTACTTCTCCTAGAATTA	TTAC	20	PASS	ClusterIDs=HG2_PB_pbsv_3225:HG4_PB_HySA_4858:HG2_PB_assemblyticsfalcon_17510:HG2_PB_SVrefine2PB10Xhap12_2375:HG2_PB_SVrefine2Falcon2Bionano_1464:HG2_PB_SVrefine2Falcon1plusDovetail_7944:HG2_Ill_manta_906:HG2_Ill_SVrefine2DISCOVARplusDovetail_8468:HG2_Ill_SpiralSDKrefine_10972:HG2_Ill_MetaSV_3219:HG4_Ill_MetaSV_3354:HG4_Ill_GATKHCSBGrefine_2251:HG2_Ill_scalpel_3136:HG2_Ill_GATKHCSBGrefine_2158:HG2_PB_HySA_6086:HG4_PB_pbsv_3243:HG4_Ill_Krunchall_4682:HG2_Ill_Krunchall_4467;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8468:HG2_Ill_manta_906:HG2_PB_SVrefine2Falcon1plusDovetail_7944:HG2_PB_SVrefine2Falcon2Bionano_1464:HG2_PB_SVrefine2PB10Xhap12_2375:HG2_PB_assemblyticsfalcon_17510;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0761523;ClusterMaxSizeDiff=0.0761523;ClusterMaxEditDist=0.10142;PBcalls=8;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-253;DistBack=0;DistForward=39079;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:46045873-46046129;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9961;PctRecOverlap=0.9883;SizeDiff=-1;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=99;MatchId=2499.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:36:0|1:32:1:0:30:./.:0:0:0:0:0/1:52:25:./.:.:.:.:.:.
chr3	47490667	HG2_10X_SVrefine210Xhap12_2428	TGCTGTTTAGGGTCAGATGCACGTATGTTAGTTCTGAGGAACAGCCCAAGAGTTCATATGCAACTTTATGAGTTCAATTTGTTGAGCTCCTTCCTCTACACAATCTTCCTAACACTTTCCAGATCCCAAGGGCCCCTTTCCTGGTCTTCTGGCTAAAAGTCAGGGGTTTAATTTCCCTAACCTGCTGAGTACCTCCCACAACTGTGACTACCTCCAAGGAAAAGCAATGAGAGAAAGGAAAGAACAAAATCAAGGATTCCCTCCATGCTCCTGGGACCACAGTCCCTTTAAATAGAAGACTTCCTCTCCTATCCATTTGCCAATGTCACTGCTGTCTCCACCACTACACAATTACGTGGAGGGCCAGAGCAAGAGAAAAGGAGAAAAGACAAAGCAAACAACACACGAGATTTCTTCCTCCATCCCCATTCCTGACCCATGAGGATCCCCTTTCCTGCTCCTCAAACTAGAAAGATGGCTTCTGTTAGACCTCTTTCTGTGCACATCCAGCACACATTTCCAGGTTTGGGGCTGACTTTAAGTGCAGGCTGGAAAATATTGTATGGAGGAAAAAAAATTATGGGAAACTCACTACCAGTTCACTGGTATTTGGAGTTCTGGTTTCCTTCTCCAATTCGCATGCTAACATTTATCTTTCTGGGGTTACTCCACTGATCCATGCATTCTGTCCAGGGATTTCAGTTGCTCTCTTCAGACATAAAGGGTGGAGTATGTTTACTCCATCTTTATCACATCAGAACTCTTAAATTTTTTTAATGTGATAATCTTCCTACATTTCAGGATTCTTTGCCTTCAAAGAAACTTTTTTTTCTTTTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACCGCAACCTCCGCCTCCTGGGCTCAAGCAATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGAGTTACAGGCGTGCGCCACCCCACCCAGCTAATTTTTATATTTTTGGTAGAAACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCCAATTCCTGACCTCAATGAATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCTCCTGGCCCTAAGGAAACTTTTCACACTACGCCTACTGGCATTTTTCTGTCAATCACATCATTTCATTGTGAGAAGCATGTAGTAAAGTTTTCTACAAAAAGCACACATTACTTTTACAATTTGAAAAAATAAAAATTATATACAAAAAGTGCACAAAAGGAGAATAGAGGGAAACGTTAGTAGTGGTTGCTTGTCTTTGTGTAATGTGATTATATGCAGGGTTTTTTTTTTTTTTTCCTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAATGCAGTGGCAGGATCACAGCTCACTGCAGCCTCAATCTCCCAGGCTCAGGTGATCCTCCCACTTTAGCCTGCCTATAGGCACGTACCACCATGAGAGATAATTTTTGGTAATTTTAGTAGAGACAGGGTTTTGCCACGTTGCCCAGGCTGGTCTCAAACTCCTGGGCTCAAGCAATCCTCCTGCCTCAATTTCCCAAACTGATTATAGGTGTGAGCCACCACACCCAGCAGAGAAATTTTTAAACTCAAATCTCAGTATCTTTACATTTTTCACTATAAGCATTTATTTATTTTTCTTTTTTTAGAGATGGGGTCTCACTCTGTCACCCAGGCTGGGGTACAGTGGCACTATCATGTCTTACTGTAGCCTTGAATTCCTGGACGCAGTCCTCCCAGCTCAGCTTCCCGTGTAGCTAGGATTACAGGCATGTGCCACCATGGCCAGCTAATTAAAAAAAAAAAATGTTGTGGGGAGACAGGGTCTCAATATGTTGCCCAGGTTGGTCTTGAACTCCTGGTTTCAAGCAATCCTCCTGCCTCAGCCTCCCAAAGTGTTGGGATTACAGACATGAGCCACCGTGCAAGACTATTTTAAATAAACTTTTGAAGTTTAGTATAACATATCACAGAAAAGCACACAAATTATAAGCACACAGCTCCATGAATTACCACCAAGTAAACAAAGCCATGTAACCTAAACACCATTCCATCAAGAAACAGAACATTACCCCAAAGGTCCCCTTTATGAGCCCCAATGCTGACTATTTTTCAATTATAAAAGTAAAAATATACATGTTTATATTCAAATATTCAAACAGTCCTGGAATGCCTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCATGGCTCACTGCAGCCTCCACCTCCCAGGCTCAATCAATTCTCCCACTTCAGCCTCCCAAGTAGCTAGGACTATAGGCGTGCACCACCACACCCAACGAAATGTTTGTATTTTTAATAGAGATGGGGTTTTACCATGTTGCCCAGGCTGGTCTTAAACTCTTAGACTCCAGCAATCCTCCTGCCTCAGCCTCCCAAAGAGTTGGGATTACAGGCTGAGCCACCCACCATGCCTGGCCCTCATAGACCCCTTCCTACCTATCCCTTTACAATTCACTTTATCTCAGAGGTCAGAGTGGACACAGATTCTACTAATGCTGTGAGCTGGATACCCTTCTGCACTTAGAACAAAGCCCAAATGCCTCCCCCTAGCTCTCAGGGCTCTGCACAACCCACCCCGGTCCTCTGCAACTTCACTTCGTGTCACCTCTCCCTGTTCTGGTTTCTTCCAATGCCTTATGTGTGCCAACCTCATTCCCATCTCAGGG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3221:HG2_10X_allpass_497:HG4_PB_pbsv_3254:HG3_10X_allpass_618:HG3_PB_HySA_4998:HG4_PB_assemblyticsfalcon_17155:HG2_PB_assemblyticsPBcR_16939:HG4_10X_allpass_587:HG2_Ill_tnscope_333:HG4_PB_SVrefine2Falcon1Dovetail_1955:HG4_Ill_SVrefine2DISCOVARDovetail_2406:HG4_Ill_MetaSV_3358:HG4_Ill_GATKHCSBGrefine_2257:HG3_PB_SVrefine2PBcRDovetail_1587:HG3_PB_SVrefine2Falcon1Dovetail_2015:HG3_Ill_SVrefine2DISCOVARDovetail_2408:HG3_Ill_MetaSV_3381:HG2_PB_pbsv_3235:HG2_PB_SVrefine2PBcRplusDovetail_7367:HG2_PB_SVrefine2PB10Xhap12_2382:HG2_PB_SVrefine2Falcon2Bionano_1471:HG2_PB_SVrefine2Falcon1plusDovetail_7950:HG2_Ill_breakscan11_447:HG2_Ill_SpiralSDKrefine_10984:HG2_Ill_SVrefine2DISCOVARplusDovetail_8476:HG2_10X_SVrefine210Xhap12_2428:HG4_Ill_Krunchall_4698:HG3_PB_pbsv_3190:HG3_Ill_Krunchall_4471:HG3_PB_assemblyticsfalcon_17456;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2428:HG2_Ill_SVrefine2DISCOVARplusDovetail_8476:HG2_Ill_SpiralSDKrefine_10984:HG2_Ill_breakscan11_447:HG2_PB_SVrefine2Falcon1plusDovetail_7950:HG2_PB_SVrefine2Falcon2Bionano_1471:HG2_PB_SVrefine2PB10Xhap12_2382:HG2_PB_SVrefine2PBcRplusDovetail_7367:HG2_PB_pbsv_3235:HG3_Ill_MetaSV_3381:HG3_Ill_SVrefine2DISCOVARDovetail_2408:HG3_PB_SVrefine2Falcon1Dovetail_2015:HG3_PB_SVrefine2PBcRDovetail_1587:HG4_Ill_GATKHCSBGrefine_2257:HG4_Ill_MetaSV_3358:HG4_Ill_SVrefine2DISCOVARDovetail_2406:HG4_PB_SVrefine2Falcon1Dovetail_1955;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0285103;ClusterMaxSizeDiff=0.0285103;ClusterMaxEditDist=0.0285103;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2773;DistBack=17909;DistForward=-2772;DistMin=-2772;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=3:47490668-47493442;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2501.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:40:./.:13:16:8:3:./.:0:0:0:0:0/1:36:19:0/1:239:109:.:.:.
chr3	48197036	HG2_PB_SVrefine2PBcRplusDovetail_7370	TGTAATCCTAGCACTTTGGGAGGCCAAGGCAGGGGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCTACTAAAAATATAAAATTAGCTGGGTGTGGTGGCACATGCCC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8483:HG3_PB_pbsv_3193:HG2_PB_pbsv_3238:HG4_PB_pbsv_3258:HG4_PB_HySA_4879:HG4_10X_allpass_588:HG3_10X_allpass_619:HG2_Ill_SpiralSDKrefine_10989:HG2_10X_allpass_498:HG4_PB_SVrefine2Falcon1Dovetail_1958:HG4_Ill_SVrefine2DISCOVARDovetail_2414:HG2_PB_SVrefine2PBcRplusDovetail_7370:HG2_PB_SVrefine2PB10Xhap12_2386:HG2_PB_SVrefine2Falcon1plusDovetail_7953;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8483:HG4_PB_SVrefine2Falcon1Dovetail_1958:HG4_Ill_SVrefine2DISCOVARDovetail_2414:HG2_PB_SVrefine2PBcRplusDovetail_7370:HG2_PB_SVrefine2PB10Xhap12_2386:HG2_PB_SVrefine2Falcon1plusDovetail_7953;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0528302;ClusterMaxSizeDiff=0.0528302;ClusterMaxEditDist=0.0610687;PBcalls=8;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-134;DistBack=39945;DistForward=-102;DistMin=-102;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=178;REFWIDENED=3:48197037-48197348;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9407;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=97;MatchId=2502.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:20:0|1:17:3:0:15:./.:0:0:0:0:0/1:22:11:./.:.:.:.:.:.
chr3	48599066	HG4_Ill_Krunchall_4704	ATCCCATCCTTCAGTCGCTTTGTGTTTATTGAGCACCTCCTGCTGCAGGACCTCCATGTCTGCTACATACACAATGCTCACAGGCTTGCTGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2432:HG2_PB_HySA_6111:HG4_PB_pbsv_3263:HG3_PB_pbsv_3202:HG2_PB_pbsv_3245:HG4_PB_HySA_4881:HG4_PB_SVrefine2Falcon1Dovetail_1964:HG4_Ill_manta_790:HG4_Ill_SVrefine2DISCOVARDovetail_2420:HG4_Ill_Krunchall_4704:HG4_Ill_GATKHCSBGrefine_2263:HG4_Ill_250bpfermikitraw_4481:HG4_Ill_150bpfermikitraw_4281:HG3_PB_SVrefine2Falcon1Dovetail_2023:HG3_Ill_SVrefine2DISCOVARDovetail_2416:HG3_Ill_Krunchall_4485:HG3_Ill_GATKHCSBGrefine_2165:HG3_Ill_250bpfermikitraw_4352:HG3_10X_allpass_620:HG2_PB_SVrefine2PBcRplusDovetail_7376:HG2_PB_SVrefine2PB10Xhap12_2394:HG2_PB_SVrefine2Falcon2Bionano_1478:HG2_PB_SVrefine2Falcon1plusDovetail_7962:HG2_Ill_manta_910:HG2_Ill_SpiralSDKrefine_10992:HG2_Ill_SVrefine2DISCOVARplusDovetail_8488:HG2_Ill_GATKHCSBGrefine_2169:HG2_Ill_250bpfermikitraw_4422:HG2_Ill_150bpfermikitraw_4101;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2432:HG4_PB_SVrefine2Falcon1Dovetail_1964:HG4_Ill_manta_790:HG4_Ill_SVrefine2DISCOVARDovetail_2420:HG4_Ill_Krunchall_4704:HG4_Ill_GATKHCSBGrefine_2263:HG4_Ill_250bpfermikitraw_4481:HG4_Ill_150bpfermikitraw_4281:HG3_PB_SVrefine2Falcon1Dovetail_2023:HG3_Ill_SVrefine2DISCOVARDovetail_2416:HG3_Ill_Krunchall_4485:HG3_Ill_GATKHCSBGrefine_2165:HG3_Ill_250bpfermikitraw_4352:HG3_10X_allpass_620:HG2_PB_SVrefine2PBcRplusDovetail_7376:HG2_PB_SVrefine2PB10Xhap12_2394:HG2_PB_SVrefine2Falcon2Bionano_1478:HG2_PB_SVrefine2Falcon1plusDovetail_7962:HG2_Ill_manta_910:HG2_Ill_SpiralSDKrefine_10992:HG2_Ill_SVrefine2DISCOVARplusDovetail_8488:HG2_Ill_GATKHCSBGrefine_2169:HG2_Ill_250bpfermikitraw_4422:HG2_Ill_150bpfermikitraw_4101;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0217391;ClusterMaxSizeDiff=0.0217391;ClusterMaxEditDist=0.021978;PBcalls=11;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-91;DistBack=1708;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=92;REFWIDENED=3:48599067-48599249;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2503.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:60:1/1:6:29:1:26:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr3	48957737	HG2_PB_SVrefine2PB10Xhap12_2395	AGTGCCCGGCCCACTTTTTCAAGTAGAATTCGGATATTTAACTTTGAGATGATTAAAAATTAAATTTTCATTTAAATGTGCACCTAGAACATTTAGTATGAAATGGAGTTCTCTCTCTTTTTTTTTTGGAGGAGCCTGGAGTTTTCCCCACCTAAATATTTGGTTGGTGAGAAGCCTGTGAGCAATTTCTTTTTTTTTTTTTTTTTTTGACACGGAGTCTCACTGTGTTGCCCAGGCTGGAGTGCAGTGGTGCAGTCTCGGTTCACTGCAGCCTCCATCTCCCAGATCAAGCAGTTCTGCCTTAGCCTCCCGAGTAGCTGGGATTACAGCTGGGATTACACCCAGGCTGGTTGGAGGGCAGTGGCGTGATCATGGCTCGCTGCAATCTCCTGGACTCAAATAATCCTCCTCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGCGGGCGCCTGTAATCCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCAAGACTCTCAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAATATTGTCCCCTTGGAACAAGATCAGCACTTTTTCTTTCTTTCATTTATTTATTTTTATTTTTGAGTCCCGCTCTGTCTCTCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCGCATGCTACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGATTTCATCATGTTGATTAGGCTGGTCTCGAACTCTTGACCTTGTGATCTGCCACCTTAGCCTCCCAAAGTGTTGGGATCACAGGCGTGAGCCACC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2436:HG2_Ill_MetaSV_3224:HG3_PB_pbsv_3204:HG2_Ill_breakscan11_448:HG2_PB_pbsv_3247:HG3_Ill_MetaSV_3385:HG3_Ill_manta_723:HG3_Ill_GATKHCSBGrefine_2166:HG2_Ill_GATKHCSBGrefine_2170:HG4_PB_SVrefine2Falcon1Dovetail_1965:HG3_PB_SVrefine2Falcon1Dovetail_2024:HG3_Ill_SVrefine2DISCOVARDovetail_2417:HG2_PB_SVrefine2PB10Xhap12_2395:HG2_PB_SVrefine2Falcon2Bionano_1479;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2436:HG4_PB_SVrefine2Falcon1Dovetail_1965:HG3_PB_SVrefine2Falcon1Dovetail_2024:HG3_Ill_SVrefine2DISCOVARDovetail_2417:HG2_PB_SVrefine2PB10Xhap12_2395:HG2_PB_SVrefine2Falcon2Bionano_1479;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0063762;ClusterMaxSizeDiff=0.0063762;ClusterMaxEditDist=0.0106157;PBcalls=6;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-939;DistBack=53613;DistForward=-878;DistMin=-878;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=333;REFWIDENED=3:48957738-48959009;PctSeqSimilarity=0.9706;PctSizeSimilarity=1;PctRecOverlap=0.9468;SizeDiff=0;StartDistance=-50;EndDistance=-50;GTMatch=0;TruScore=97;MatchId=2504.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:20:20:0|1:19:0:0:15:./.:0:0:0:0:./.:53:4:0/1:68:33:.:.:.
chr3	49197749	HG3_Ill_manta_724	CACAGGGGCAATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2437:HG3_Ill_GATKHCSBGrefine_2168:HG2_Ill_GATKHCSBGrefine_2172:HG2_PB_HySA_6116:HG3_Ill_Spiral_3506:HG2_Ill_Spiral_226:HG2_PB_PB10Xdip_20768:HG2_PB_assemblyticsPBcR_16953:HG2_PB_HySA_6115:HG3_Ill_Krunchall_4488:HG2_PB_pbsv_3248:HG4_PB_SVrefine2Falcon1Dovetail_1966:HG3_Ill_MetaSV_3386:HG2_Ill_tnscope_334:HG2_Ill_MetaSV_3225:HG4_PB_assemblyticsfalcon_17169:HG3_PB_pbsv_3205:HG3_PB_assemblyticsfalcon_17472:HG3_PB_SVrefine2Falcon1Dovetail_2025:HG3_Ill_scalpel_3277:HG3_Ill_manta_724:HG3_Ill_SVrefine2DISCOVARDovetail_2419:HG3_10X_allpass_621:HG2_PB_assemblyticsfalcon_17547:HG2_PB_SVrefine2PBcRplusDovetail_7377:HG2_PB_SVrefine2PB10Xhap12_2396:HG2_PB_SVrefine2Falcon1plusDovetail_7963:HG2_10X_allpass_499;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2437:HG4_PB_assemblyticsfalcon_17169:HG3_PB_pbsv_3205:HG3_PB_assemblyticsfalcon_17472:HG3_PB_SVrefine2Falcon1Dovetail_2025:HG3_Ill_scalpel_3277:HG3_Ill_manta_724:HG3_Ill_SVrefine2DISCOVARDovetail_2419:HG3_10X_allpass_621:HG2_PB_assemblyticsfalcon_17547:HG2_PB_SVrefine2PBcRplusDovetail_7377:HG2_PB_SVrefine2PB10Xhap12_2396:HG2_PB_SVrefine2Falcon1plusDovetail_7963:HG2_10X_allpass_499;NumExactMatchSVs=14;ClusterMaxShiftDist=0.103226;ClusterMaxSizeDiff=0.103226;ClusterMaxEditDist=0.10356;PBcalls=14;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=92365;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=3:49197750-49198086;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2505.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:41:0|1:28:1:0:36:./.:0:0:0:0:0/1:27:18:0/1:19:7:.:.:0.792349
chr3	49494276	HG4_10X_allpass_589	TGATGGTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_335:HG4_PB_HySA_4883:HG4_Ill_Krunchall_4706:HG2_Ill_Krunchall_4496:HG4_PB_assemblyticsfalcon_17172:HG3_PB_assemblyticsfalcon_17475:HG2_PB_assemblyticsfalcon_17551:HG2_PB_assemblyticsPBcR_16957:HG2_PB_HySA_6121:HG2_Ill_Spiral_227:HG4_PB_pbsv_3265:HG4_Ill_MetaSV_3364:HG3_Ill_MetaSV_3387:HG2_Ill_MetaSV_3226:HG4_PB_SVrefine2Falcon1Dovetail_1968:HG4_Ill_scalpel_3070:HG4_Ill_SVrefine2DISCOVARDovetail_2424:HG4_Ill_GATKHCSBGrefine_2265:HG4_10X_allpass_589:HG3_PB_pbsv_3207:HG3_PB_SVrefine2Falcon1Dovetail_2028:HG3_Ill_scalpel_3280:HG3_Ill_manta_725:HG3_Ill_SVrefine2DISCOVARDovetail_2421:HG3_Ill_GATKHCSBGrefine_2169:HG3_10X_allpass_622:HG2_PB_pbsv_3251:HG2_PB_SVrefine2PBcRplusDovetail_7380:HG2_PB_SVrefine2PB10Xhap12_2399:HG2_PB_SVrefine2Falcon2Bionano_1481:HG2_PB_SVrefine2Falcon1plusDovetail_7966:HG2_Ill_scalpel_3151:HG2_Ill_manta_911:HG2_Ill_breakscan11_449:HG2_Ill_SpiralSDKrefine_10995:HG2_Ill_SVrefine2DISCOVARplusDovetail_8494:HG2_Ill_GATKHCSBGrefine_2174:HG2_10X_allpass_500:HG2_10X_SVrefine210Xhap12_2441;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2441:HG2_10X_allpass_500:HG2_Ill_GATKHCSBGrefine_2174:HG2_Ill_SVrefine2DISCOVARplusDovetail_8494:HG2_Ill_SpiralSDKrefine_10995:HG2_Ill_breakscan11_449:HG2_Ill_manta_911:HG2_Ill_scalpel_3151:HG2_PB_SVrefine2Falcon1plusDovetail_7966:HG2_PB_SVrefine2Falcon2Bionano_1481:HG2_PB_SVrefine2PB10Xhap12_2399:HG2_PB_SVrefine2PBcRplusDovetail_7380:HG2_PB_pbsv_3251:HG3_10X_allpass_622:HG3_Ill_GATKHCSBGrefine_2169:HG3_Ill_SVrefine2DISCOVARDovetail_2421:HG3_Ill_manta_725:HG3_Ill_scalpel_3280:HG3_PB_SVrefine2Falcon1Dovetail_2028:HG3_PB_pbsv_3207:HG4_10X_allpass_589:HG4_Ill_GATKHCSBGrefine_2265:HG4_Ill_SVrefine2DISCOVARDovetail_2424:HG4_Ill_scalpel_3070:HG4_PB_SVrefine2Falcon1Dovetail_1968;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0646154;ClusterMaxSizeDiff=0.0646154;ClusterMaxEditDist=0.0646154;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=52409;DistForward=21629;DistMin=21629;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=3:49494277-49494616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2506.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:50:1/1:1:28:3:15:./.:0:0:0:0:1/1:0:42:./.:1:11:.:.:.
chr3	49517941	HG2_Ill_GATKHCSBGrefine_2175	AGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGAGCTGGGATTACAGGCGTGAGCCACTGCGTCCGGCGCATATAACATTTCTAATGGTTAATCTGTCCCTAATTCTTAGACAGTTTGGTTCTTTTTTTTTGTTTTTCTTCTTATTATTTGTTTTAGCTATTTCCTACAGGAAGGAGGTTATTTCTTACTTTGGTTGTAATAGATAATGTTGCAATTAACATCTCTGCATAAAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGTTGCCTGTAGCCACACCTGGATAATTTTTTGTATTTTTAGTAGAGAGGGGGTTTCACCCTGTTAGCCAGGAC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1482:HG2_PB_HySA_6122:HG2_PB_pbsv_3252:HG4_PB_HySA_4884:HG4_PB_pbsv_3266:HG4_Ill_MetaSV_3365:HG4_Ill_GATKHCSBGrefine_2266:HG4_10X_allpass_590:HG2_Ill_SpiralSDKrefine_10996:HG2_Ill_MetaSV_3227:HG2_Ill_GATKHCSBGrefine_2175:HG2_10X_allpass_501:HG2_Ill_tnscope_336:HG2_PB_SVrefine2Falcon1plusDovetail_7967:HG2_PB_SVrefine2PB10Xhap12_2400:HG4_PB_SVrefine2Falcon1Dovetail_1969:HG4_Ill_SVrefine2DISCOVARDovetail_2426:HG3_PB_SVrefine2Falcon1Dovetail_2029;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_501:HG2_Ill_GATKHCSBGrefine_2175:HG2_Ill_MetaSV_3227:HG2_Ill_SpiralSDKrefine_10996:HG4_10X_allpass_590:HG4_Ill_GATKHCSBGrefine_2266;NumExactMatchSVs=6;ClusterMaxShiftDist=0.05;ClusterMaxSizeDiff=0.05;ClusterMaxEditDist=0.0917623;PBcalls=9;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-468;DistBack=114;DistForward=-468;DistMin=-468;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=324;REFWIDENED=3:49517701-49518492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2507.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:23:20:./.:15:13:5:3:./.:0:0:0:0:0/1:27:5:0/1:40:7:.:.:.
chr3	49975459	HG2_10X_SVrefine210Xhap12_2446	CTTTCTTTTTTTTCAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGTGTGCAGTGGCGCAAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCACTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGGCTGCCGCCACGCTCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACTTCGTGATCCGCCCGCCGCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACTGCGCCCAACCTCTTTCTTTTTCTTTTTTGAGACGGAGTCTTGCTCTGTTGTGAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACGGCAACATCCGCCTCCCGGGTTCAAGCAATTCTCTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCATGCGCCACCACGCCCGGGTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATCTTGGCCAGACTGGTCTTGAACTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAAGCGTGAGGCACTGCGCCCGGCCTCTTTCTTTCTTTCCTTTTTTCTGAGACGGAGTCTTGCTCTATTGTCCAGGCTGGAGTGCAGTGACACAGTCTAGGCTCACTGCAATCTCTGCCTCCCGGGTTTAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCTGCCACCAAGCCCGGGTAATTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2446:HG3_PB_pbsv_3209:HG2_PB_HySA_6129:HG3_10X_allpass_623:HG2_10X_allpass_502:HG4_10X_allpass_591:HG4_Ill_GATKHCSBGrefine_2268:HG3_Ill_MetaSV_3389:HG3_Ill_GATKHCSBGrefine_2172:HG2_PB_PB10Xdip_20780:HG2_Ill_GATKHCSBGrefine_2177:HG2_PB_pbsv_3256:HG4_Ill_SVrefine2DISCOVARDovetail_2428:HG2_PB_SVrefine2PBcRplusDovetail_7384:HG2_PB_SVrefine2PB10Xhap12_2403:HG2_PB_SVrefine2Falcon1plusDovetail_7971;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2446:HG4_Ill_SVrefine2DISCOVARDovetail_2428:HG2_PB_SVrefine2PBcRplusDovetail_7384:HG2_PB_SVrefine2PB10Xhap12_2403:HG2_PB_SVrefine2Falcon1plusDovetail_7971;NumExactMatchSVs=5;ClusterMaxShiftDist=0.142758;ClusterMaxSizeDiff=0.142758;ClusterMaxEditDist=0.221448;PBcalls=7;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-765;DistBack=6408;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=782;REFWIDENED=3:49975460-49977006;PctSeqSimilarity=0.951;PctSizeSimilarity=0.9909;PctRecOverlap=0.0323;SizeDiff=-7;StartDistance=-741;EndDistance=-748;GTMatch=0;TruScore=65;MatchId=2508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:0|1:18:3:2:16:./.:0:0:0:0:0/0:77:0:./.:122:11:.:.:.
chr3	52709837	HG3_10X_allpass_624	AGAATGAAGCGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2460:HG3_PB_assemblyticsfalcon_17500:HG2_PB_assemblyticsfalcon_17580:HG4_Ill_Krunchall_4723:HG3_Ill_Krunchall_4501:HG2_Ill_Krunchall_4516:HG3_Ill_Spiral_3516:HG2_PB_pbsv_3275:HG2_PB_HySA_6158:HG4_PB_pbsv_3288:HG3_Ill_MetaSV_3393:HG2_Ill_MetaSV_3231:HG4_Ill_MetaSV_3370:HG4_Ill_GATKHCSBGrefine_2277:HG4_10X_allpass_592:HG3_PB_pbsv_3224:HG3_Ill_GATKHCSBGrefine_2181:HG3_10X_allpass_624:HG2_Ill_manta_914:HG2_Ill_GATKHCSBGrefine_2185:HG2_10X_allpass_503:HG4_Ill_Spiral_265:HG2_Ill_Spiral_228:HG3_PB_HySA_5029:HG2_Ill_breakscan11_451:HG2_Ill_tnscope_337:HG3_PB_SVrefine2Falcon1Dovetail_2041:HG2_PB_SVrefine2PB10Xhap12_2411:HG2_PB_SVrefine2Falcon1plusDovetail_7982;NumClusterSVs=29;ExactMatchIDs=HG2_10X_allpass_503:HG2_Ill_GATKHCSBGrefine_2185:HG2_Ill_manta_914:HG3_10X_allpass_624:HG3_Ill_GATKHCSBGrefine_2181:HG3_PB_pbsv_3224:HG4_10X_allpass_592:HG4_Ill_GATKHCSBGrefine_2277:HG4_Ill_MetaSV_3370;NumExactMatchSVs=9;ClusterMaxShiftDist=0.100457;ClusterMaxSizeDiff=0.100457;ClusterMaxEditDist=0.100457;PBcalls=10;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=28391;DistForward=-333;DistMin=-333;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=3:52709833-52710184;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:./.:18:6:0:14:./.:0:0:0:0:0/1:21:28:0/1:23:11:.:.:.
chr3	53069154	HG3_Ill_SVrefine2DISCOVARDovetail_2441	GACTGGGCCTGAGTGCTTCAAGGATTCCGCATGCCTTCCTGAGGAGTTTGGACTTTACCCGGCCAAATGTGGGATTTTATGTGACTAAAATCAAGTTTGTTTAGAAAGCTCT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2464:HG3_PB_pbsv_3227:HG2_PB_pbsv_3279:HG4_PB_pbsv_3292:HG2_PB_HySA_6165:HG3_Ill_svaba_4175:HG3_10X_allpass_626:HG2_Ill_svaba_4056:HG2_Ill_SpiralSDKrefine_11013:HG2_Ill_GATKHCSBGrefine_2187:HG2_Ill_250bpfermikitraw_4449:HG2_Ill_150bpfermikitraw_4125:HG2_10X_allpass_504:HG4_PB_SVrefine2PBcRDovetail_1717:HG4_PB_SVrefine2Falcon1Dovetail_1987:HG3_PB_SVrefine2Falcon1Dovetail_2043:HG3_Ill_SVrefine2DISCOVARDovetail_2441:HG2_PB_SVrefine2PBcRplusDovetail_7396:HG2_PB_SVrefine2PB10Xhap12_2414:HG2_PB_SVrefine2Falcon2Bionano_1494:HG2_PB_SVrefine2Falcon1plusDovetail_7985:HG2_Ill_SVrefine2DISCOVARplusDovetail_8520;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2464:HG4_PB_SVrefine2PBcRDovetail_1717:HG4_PB_SVrefine2Falcon1Dovetail_1987:HG3_PB_SVrefine2Falcon1Dovetail_2043:HG3_Ill_SVrefine2DISCOVARDovetail_2441:HG2_PB_SVrefine2PBcRplusDovetail_7396:HG2_PB_SVrefine2PB10Xhap12_2414:HG2_PB_SVrefine2Falcon2Bionano_1494:HG2_PB_SVrefine2Falcon1plusDovetail_7985:HG2_Ill_SVrefine2DISCOVARplusDovetail_8520;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0269058;ClusterMaxSizeDiff=0.0269058;ClusterMaxEditDist=0.036036;PBcalls=11;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-111;DistBack=0;DistForward=20278;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=125;REFWIDENED=3:53069155-53069390;PctSeqSimilarity=0.9833;PctSizeSimilarity=1;PctRecOverlap=0.9107;SizeDiff=0;StartDistance=-10;EndDistance=-10;GTMatch=0;TruScore=96;MatchId=2510.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:./.:2:8:0:1:./.:0:0:0:0:0/1:13:32:./.:.:.:.:.:.
chr3	54013528	HG2_Ill_GATKHCSBGrefine_2190	CTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_3297:HG2_PB_pbsv_3284:HG4_Ill_Krunchall_4739:HG4_Ill_GATKHC_5416:HG4_Ill_GATKHCSBGrefine_2281:HG4_Ill_250bpfermikitraw_4516:HG3_Ill_GATKHC_5437:HG3_Ill_GATKHCSBGrefine_2185:HG2_Ill_Krunchall_4529:HG2_Ill_GATKHC_5338:HG2_Ill_GATKHCSBGrefine_2190:HG2_Ill_250bpfermikitraw_4458;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_4458:HG2_Ill_GATKHCSBGrefine_2190:HG2_Ill_GATKHC_5338:HG2_Ill_Krunchall_4529:HG3_Ill_GATKHCSBGrefine_2185:HG3_Ill_GATKHC_5437:HG4_Ill_250bpfermikitraw_4516:HG4_Ill_GATKHCSBGrefine_2281:HG4_Ill_GATKHC_5416:HG4_Ill_Krunchall_4739;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0384615;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=42770;DistForward=-49;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:54013527-54013595;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2511.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:38:./.:14:11:3:26:./.:0:0:0:0:0/1:14:12:./.:.:.:.:.:.
chr3	55358446	HG4_Ill_SVrefine2DISCOVARDovetail_2454	TTCTCCTGCCTCGGCGTCCCCAGTAGCTGGGATTACAGGTATGTGCCACCATGCCCACCTAACTGGGGCCTGCCTCAGATAAATTGTAAAAGAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2472:HG2_PB_pbsv_3290:HG4_PB_pbsv_3303:HG4_PB_SVrefine2PBcRDovetail_1720:HG4_Ill_svaba_4170:HG4_Ill_scalpel_3097:HG4_Ill_SVrefine2DISCOVARDovetail_2454:HG4_Ill_Krunchall_4750:HG4_Ill_GATKHC_5429:HG4_Ill_GATKHCSBGrefine_2287:HG4_Ill_250bpfermikitraw_4528:HG4_Ill_150bpfermikitraw_4323:HG4_CG_vcfBeta_2178:HG4_10X_allpass_593:HG2_PB_SVrefine2Falcon2Bionano_1499:HG2_Ill_svaba_4080:HG2_Ill_scalpel_3181:HG2_Ill_SpiralSDKrefine_11027:HG2_Ill_SVrefine2DISCOVARplusDovetail_8528:HG2_Ill_Krunchall_4546:HG2_Ill_GATKHC_5355:HG2_Ill_GATKHCSBGrefine_2195:HG2_Ill_250bpfermikitraw_4475:HG2_Ill_150bpfermikitraw_4147:HG2_CG_vcfBeta_1968:HG2_10X_allpass_505;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2472:HG4_PB_pbsv_3303:HG4_PB_SVrefine2PBcRDovetail_1720:HG4_Ill_svaba_4170:HG4_Ill_scalpel_3097:HG4_Ill_SVrefine2DISCOVARDovetail_2454:HG4_Ill_Krunchall_4750:HG4_Ill_GATKHC_5429:HG4_Ill_GATKHCSBGrefine_2287:HG4_Ill_250bpfermikitraw_4528:HG4_Ill_150bpfermikitraw_4323:HG4_CG_vcfBeta_2178:HG4_10X_allpass_593:HG2_PB_SVrefine2Falcon2Bionano_1499:HG2_Ill_svaba_4080:HG2_Ill_scalpel_3181:HG2_Ill_SpiralSDKrefine_11027:HG2_Ill_SVrefine2DISCOVARplusDovetail_8528:HG2_Ill_Krunchall_4546:HG2_Ill_GATKHC_5355:HG2_Ill_GATKHCSBGrefine_2195:HG2_Ill_250bpfermikitraw_4475:HG2_Ill_150bpfermikitraw_4147:HG2_CG_vcfBeta_1968:HG2_10X_allpass_505;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0106952;ClusterMaxSizeDiff=0.0106952;ClusterMaxEditDist=0.0106952;PBcalls=4;Illcalls=17;TenXcalls=3;CGcalls=2;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=2;HG2count=14;HG3count=0;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-93;DistBack=13368;DistForward=30393;DistMin=13368;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=3:55358447-55358541;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:27:./.:29:7:11:13:./.:0:0:0:0:0/1:24:27:./.:.:.:.:.:.
chr3	56604699	HG4_Ill_svaba_4192	CTGGGAGGCGGAGATTGCAGTGAGCTGAGATAGCGCCATTGCACTCCAGGCTGCTGACAGAATGAGACTCTATATTAAAAAAAAAAAAAGCTTACCAGCAGTTTGCTAACAGTCACGTAGCTGGGAAGTTGTTGAACTTGAATTTTAACCCATAGTTCTCTACTTCAGAATTCTAGCTTTTAATTCTCTTAATAATAATTGAATGAACATTACAGGAAACTAGAACCTCGTGATAATTGACAAAGTATAAAATAAGT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_3309:HG2_PB_HySA_6209:HG4_Ill_MetaSV_3372:HG3_PB_HySA_5068:HG2_Ill_tnscope_338:HG2_Ill_MetaSV_3233:HG4_PB_assemblyticsfalcon_17232:HG4_PB_SVrefine2PBcRDovetail_1722:HG4_PB_SVrefine2Falcon1Dovetail_1996:HG4_Ill_svaba_4192:HG4_Ill_scalpel_3109:HG4_Ill_manta_794:HG4_Ill_SVrefine2DISCOVARDovetail_2460:HG4_Ill_GATKHCSBGrefine_2292:HG4_10X_allpass_594:HG3_Ill_svaba_4217:HG3_Ill_scalpel_3318:HG3_Ill_GATKHCSBGrefine_2196:HG3_10X_allpass_629:HG2_PB_pbsv_3295:HG2_PB_assemblyticsfalcon_17623:HG2_PB_SVrefine2PBcRplusDovetail_7401:HG2_PB_SVrefine2PB10Xhap12_2423:HG2_PB_SVrefine2Falcon2Bionano_1503:HG2_PB_SVrefine2Falcon1plusDovetail_7993:HG2_Ill_svaba_4105:HG2_Ill_scalpel_3193:HG2_Ill_manta_919:HG2_Ill_SpiralSDKrefine_11040:HG2_Ill_GATKHCSBGrefine_2202:HG2_10X_SVrefine210Xhap12_2476:HG4_Ill_Krunchall_4771:HG2_Ill_Krunchall_4566:HG2_PB_assemblyticsPBcR_17026:HG3_PB_pbsv_3243;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2476:HG2_Ill_GATKHCSBGrefine_2202:HG2_Ill_SpiralSDKrefine_11040:HG2_Ill_manta_919:HG2_Ill_scalpel_3193:HG2_Ill_svaba_4105:HG2_PB_SVrefine2Falcon1plusDovetail_7993:HG2_PB_SVrefine2Falcon2Bionano_1503:HG2_PB_SVrefine2PB10Xhap12_2423:HG2_PB_SVrefine2PBcRplusDovetail_7401:HG2_PB_assemblyticsfalcon_17623:HG2_PB_pbsv_3295:HG3_10X_allpass_629:HG3_Ill_GATKHCSBGrefine_2196:HG3_Ill_scalpel_3318:HG3_Ill_svaba_4217:HG4_10X_allpass_594:HG4_Ill_GATKHCSBGrefine_2292:HG4_Ill_SVrefine2DISCOVARDovetail_2460:HG4_Ill_manta_794:HG4_Ill_scalpel_3109:HG4_Ill_svaba_4192:HG4_PB_SVrefine2Falcon1Dovetail_1996:HG4_PB_SVrefine2PBcRDovetail_1722:HG4_PB_assemblyticsfalcon_17232;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0077821;ClusterMaxSizeDiff=0.0077821;ClusterMaxEditDist=0.0271845;PBcalls=14;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-256;DistBack=4563;DistForward=-257;DistMin=-257;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:56604700-56604956;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2513.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:2:26:1:21:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr3	59777702	HG2_Ill_GATKHC_5402	CTGGTTTTAATCATGGCTATGGTAGTCTATGTCTTGGTTTTAATCATGGCTATGGTAGTCTATGTCT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_17051:HG4_Ill_Krunchall_4794:HG2_PB_HySA_6232:HG4_PB_pbsv_3318:HG3_PB_pbsv_3253:HG2_PB_pbsv_3306:HG4_Ill_svaba_4214:HG4_Ill_manta_797:HG4_Ill_Krunchall_4793:HG4_Ill_GATKHC_5478:HG4_Ill_GATKHCSBGrefine_2296:HG4_Ill_250bpfermikitraw_4572:HG4_Ill_150bpfermikitraw_4367:HG3_Ill_svaba_4238:HG3_Ill_Krunchall_4569:HG3_Ill_GATKHC_5498:HG3_Ill_GATKHCSBGrefine_2202:HG3_Ill_250bpfermikitraw_4438:HG3_Ill_150bpfermikitraw_4300:HG2_Ill_svaba_4129:HG2_Ill_manta_923:HG2_Ill_Krunchall_4591:HG2_Ill_GATKHC_5402:HG2_Ill_GATKHCSBGrefine_2208:HG2_Ill_250bpfermikitraw_4524:HG2_Ill_150bpfermikitraw_4191:HG2_PB_assemblyticsfalcon_17646;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4191:HG2_Ill_250bpfermikitraw_4524:HG2_Ill_GATKHCSBGrefine_2208:HG2_Ill_GATKHC_5402:HG2_Ill_Krunchall_4591:HG2_Ill_manta_923:HG2_Ill_svaba_4129:HG3_Ill_150bpfermikitraw_4300:HG3_Ill_250bpfermikitraw_4438:HG3_Ill_GATKHCSBGrefine_2202:HG3_Ill_GATKHC_5498:HG3_Ill_Krunchall_4569:HG3_Ill_svaba_4238:HG4_Ill_150bpfermikitraw_4367:HG4_Ill_250bpfermikitraw_4572:HG4_Ill_GATKHCSBGrefine_2296:HG4_Ill_GATKHC_5478:HG4_Ill_Krunchall_4793:HG4_Ill_manta_797:HG4_Ill_svaba_4214;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.0606061;PBcalls=6;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=3094;DistForward=18;DistMin=18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=65;REFWIDENED=3:59777703-59777833;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2515.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:1/1:0:22:0:26:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr3	59792391	HG4_Ill_Krunchall_4795	TATATATGTGTATATATATGTATATACATATGTATATATGTGTATATACATATGTATATAC	T	20	PASS	ClusterIDs=HG3_PB_HySA_5094:HG4_PB_HySA_4950:HG2_PB_HySA_6233:HG2_PB_pbsv_3307:HG4_PB_assemblyticsfalcon_17253:HG4_Ill_svaba_4215:HG4_Ill_scalpel_3128:HG4_Ill_Krunchall_4795:HG4_Ill_GATKHC_5479:HG4_Ill_GATKHCSBGrefine_2297:HG4_Ill_250bpfermikitraw_4573:HG4_Ill_150bpfermikitraw_4368:HG3_PB_assemblyticsfalcon_17562:HG3_Ill_svaba_4239:HG3_Ill_scalpel_3337:HG3_Ill_manta_736:HG3_Ill_Krunchall_4570:HG3_Ill_GATKHC_5499:HG3_Ill_GATKHCSBGrefine_2203:HG3_Ill_250bpfermikitraw_4439:HG3_Ill_150bpfermikitraw_4301:HG2_PB_assemblyticsPBcR_17052:HG2_Ill_svaba_4130:HG2_Ill_scalpel_3211:HG2_Ill_manta_924:HG2_Ill_SpiralSDKrefine_11061:HG2_Ill_Krunchall_4592:HG2_Ill_GATKHC_5403:HG2_Ill_GATKHCSBGrefine_2209:HG2_Ill_250bpfermikitraw_4525:HG2_Ill_150bpfermikitraw_4192:HG2_PB_assemblyticsfalcon_17647:HG3_PB_pbsv_3254:HG4_PB_pbsv_3319:HG4_CG_vcfBeta_2195:HG2_CG_vcfBeta_1988;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4192:HG2_Ill_250bpfermikitraw_4525:HG2_Ill_GATKHCSBGrefine_2209:HG2_Ill_GATKHC_5403:HG2_Ill_Krunchall_4592:HG2_Ill_SpiralSDKrefine_11061:HG2_Ill_manta_924:HG2_Ill_scalpel_3211:HG2_Ill_svaba_4130:HG2_PB_assemblyticsPBcR_17052:HG3_Ill_150bpfermikitraw_4301:HG3_Ill_250bpfermikitraw_4439:HG3_Ill_GATKHCSBGrefine_2203:HG3_Ill_GATKHC_5499:HG3_Ill_Krunchall_4570:HG3_Ill_manta_736:HG3_Ill_scalpel_3337:HG3_Ill_svaba_4239:HG3_PB_assemblyticsfalcon_17562:HG4_Ill_150bpfermikitraw_4368:HG4_Ill_250bpfermikitraw_4573:HG4_Ill_GATKHCSBGrefine_2297:HG4_Ill_GATKHC_5479:HG4_Ill_Krunchall_4795:HG4_Ill_scalpel_3128:HG4_Ill_svaba_4215:HG4_PB_assemblyticsfalcon_17253;NumExactMatchSVs=27;ClusterMaxShiftDist=0.223776;ClusterMaxSizeDiff=0.223776;ClusterMaxEditDist=0.223776;PBcalls=10;Illcalls=24;TenXcalls=0;CGcalls=2;PBexactcalls=3;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-60;DistBack=14577;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=43;REFWIDENED=3:59792363-59792465;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:0:18:1:24:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr3	60116737	HG3_10X_allpass_630	TATATATACACATATATACATATGTGTATATATACACATATATACATACATACACATGTATGTATGTATACAC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_3258:HG2_PB_assemblyticsfalcon_17652:HG2_PB_assemblyticsPBcR_17056:HG3_Ill_GATKHC_5505:HG3_Ill_GATKHCSBGrefine_2205:HG2_Ill_GATKHC_5406:HG2_Ill_GATKHCSBGrefine_2213:HG2_Ill_SpiralSDKrefine_11065:HG2_PB_PB10Xdip_20838:HG2_PB_PB10Xdip_20837:HG2_Ill_manta_925:HG3_Ill_svaba_4241:HG3_Ill_Krunchall_4576:HG3_Ill_250bpfermikitraw_4444:HG3_Ill_150bpfermikitraw_4305:HG3_10X_allpass_630:HG2_Ill_svaba_4132:HG2_Ill_Krunchall_4595:HG2_Ill_250bpfermikitraw_4530:HG2_10X_allpass_507:HG2_PB_pbsv_3311;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_507:HG2_Ill_250bpfermikitraw_4530:HG2_Ill_Krunchall_4595:HG2_Ill_svaba_4132:HG3_10X_allpass_630:HG3_Ill_150bpfermikitraw_4305:HG3_Ill_250bpfermikitraw_4444:HG3_Ill_Krunchall_4576:HG3_Ill_svaba_4241;NumExactMatchSVs=9;ClusterMaxShiftDist=0.162963;ClusterMaxSizeDiff=0.162963;ClusterMaxEditDist=0.192593;PBcalls=6;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-72;DistBack=8;DistForward=-71;DistMin=-71;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=56;REFWIDENED=3:60116701-60116828;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:42:0|1:23:3:2:37:./.:0:0:0:0:0/1:24:9:./.:.:.:.:.:.
chr3	60354802	HG2_Ill_svaba_4134	CTCAAGCAATCCTCCCACCTCAGCCTCCTGAGTAGCTCAAATCACAGGTGTGCACCAACACGCCTTGCTAATTTTTTTATTTTTTGTAGAGGGGGTCTCTCACCATGTTGCCCAGGCTGGTCTTGAATTCTAGGA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2490:HG4_Ill_Krunchall_4799:HG2_Ill_Krunchall_4598:HG4_PB_pbsv_3322:HG4_Ill_Spiral_267:HG4_Ill_svaba_4218:HG4_Ill_scalpel_3130:HG4_Ill_manta_798:HG4_Ill_GATKHCSBGrefine_2298:HG2_PB_pbsv_3312:HG2_Ill_svaba_4134:HG2_Ill_scalpel_3213:HG2_Ill_manta_926:HG2_Ill_breakscan11_452:HG2_Ill_SpiralSDKrefine_11067:HG2_Ill_GATKHCSBGrefine_2214:HG2_10X_allpass_508:HG4_PB_SVrefine2PBcRDovetail_1730:HG4_Ill_SVrefine2DISCOVARDovetail_2483:HG2_PB_SVrefine2PBcRplusDovetail_7408:HG2_PB_SVrefine2PB10Xhap12_2432:HG2_PB_SVrefine2Falcon1plusDovetail_8003:HG2_Ill_SVrefine2DISCOVARplusDovetail_8544;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_508:HG2_Ill_GATKHCSBGrefine_2214:HG2_Ill_SpiralSDKrefine_11067:HG2_Ill_breakscan11_452:HG2_Ill_manta_926:HG2_Ill_scalpel_3213:HG2_Ill_svaba_4134:HG2_PB_pbsv_3312:HG4_Ill_GATKHCSBGrefine_2298:HG4_Ill_manta_798:HG4_Ill_scalpel_3130:HG4_Ill_svaba_4218;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0223048;ClusterMaxSizeDiff=0.0223048;ClusterMaxEditDist=0.0299625;PBcalls=6;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-134;DistBack=80506;DistForward=-109;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=3:60354799-60354962;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2518.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:40:1|0:6:38:25:0:./.:0:0:0:0:0/1:25:20:./.:.:.:.:.:.
chr3	63134856	HG2_PB_SVrefine2Falcon2Bionano_1517	AACAGAAACCTGTGATAGCAGACATGTAAGCTATGAAAGGGGTTTGACTTTGATTCTAAGTGCAAGGAAAGCCACTGAAGGCTTTTAAGCAGGAGAGTGACGGGATTTAGAATTATGCTTTAGAAAATTCATTTTTACTCTTTGATTGTGAGGGTCAAGAATGGAAAGAGGAAGCTACTGCAGAGGACCAGGAGAGTGATGATGATGGCTTAGATTAAGGGACAGGCTTTTCTGTCTAGTTTTCTGTCTAGTAAAACTAGACAGAAACTAGAGCCTTCTTGCTTGTTCCCTGATAAGATAAGCAATGCTAATAAACTAAGTCTAAATAGAACGTATGCCTTTTCTTGCATTTCAATGTATTTTAATTTCTTTGTTAATAACAATTAACCACTTGTACAGAAGAGTCGAGGCATTGAGGTGTAAGAGAACTAGAAATAATTCTCTCATAAGCAGT	A	20	PASS	ClusterIDs=HG2_PB_HySA_6261:HG2_PB_assemblyticsfalcon_17670:HG4_PB_SVrefine2Falcon1Dovetail_2010:HG3_PB_pbsv_3268:HG3_PB_SVrefine2Falcon1Dovetail_2070:HG3_Ill_manta_737:HG3_Ill_GATKHCSBGrefine_2211:HG3_10X_allpass_631:HG2_PB_pbsv_3323:HG2_PB_SVrefine2PB10Xhap12_2441:HG2_PB_SVrefine2Falcon2Bionano_1517:HG2_PB_SVrefine2Falcon1plusDovetail_8009:HG2_Ill_manta_929:HG2_Ill_breakscan11_453:HG2_Ill_SpiralSDKrefine_11079:HG2_Ill_SVrefine2DISCOVARplusDovetail_8552:HG2_Ill_MetaSV_3238:HG2_Ill_GATKHCSBGrefine_2220:HG2_10X_allpass_509:HG2_10X_SVrefine210Xhap12_2500:HG2_Ill_Krunchall_4611:HG3_Ill_Spiral_3596:HG3_Ill_MetaSV_3399:HG2_Ill_tnscope_339:HG2_Ill_Spiral_230;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2500:HG2_10X_allpass_509:HG2_Ill_GATKHCSBGrefine_2220:HG2_Ill_MetaSV_3238:HG2_Ill_SVrefine2DISCOVARplusDovetail_8552:HG2_Ill_SpiralSDKrefine_11079:HG2_Ill_breakscan11_453:HG2_Ill_manta_929:HG2_PB_SVrefine2Falcon1plusDovetail_8009:HG2_PB_SVrefine2Falcon2Bionano_1517:HG2_PB_SVrefine2PB10Xhap12_2441:HG2_PB_pbsv_3323:HG3_10X_allpass_631:HG3_Ill_GATKHCSBGrefine_2211:HG3_Ill_manta_737:HG3_PB_SVrefine2Falcon1Dovetail_2070:HG3_PB_pbsv_3268:HG4_PB_SVrefine2Falcon1Dovetail_2010;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0196721;ClusterMaxSizeDiff=0.0196721;ClusterMaxEditDist=0.0196721;PBcalls=9;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-453;DistBack=103438;DistForward=-453;DistMin=-453;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:63134857-63135310;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2519.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:47:0|1:35:0:0:45:./.:0:0:0:0:0/1:45:23:0/1:35:14:.:.:.
chr3	65179628	HG2_10X_SVrefine210Xhap12_2505	CTATATATATATATATATATATATATATATATATATATATATATATATATA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7418:HG2_PB_HySA_6288:HG3_Ill_SVrefine2DISCOVARDovetail_2485:HG3_Ill_Krunchall_4607:HG3_Ill_GATKHCSBGrefine_2218:HG3_Ill_250bpfermikitraw_4476:HG3_10X_allpass_633:HG2_PB_SVrefine2Falcon2Bionano_1523:HG2_PB_SVrefine2Falcon1plusDovetail_8015:HG2_Ill_scalpel_3238:HG2_Ill_Krunchall_4628:HG2_Ill_GATKHC_5451:HG2_Ill_GATKHCSBGrefine_2227:HG2_Ill_250bpfermikitraw_4563:HG2_Ill_150bpfermikitraw_4229:HG2_10X_SVrefine210Xhap12_2505;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2505:HG2_Ill_150bpfermikitraw_4229:HG2_Ill_250bpfermikitraw_4563:HG2_Ill_GATKHCSBGrefine_2227:HG2_Ill_GATKHC_5451:HG2_Ill_Krunchall_4628:HG2_Ill_scalpel_3238:HG2_PB_SVrefine2Falcon1plusDovetail_8015:HG2_PB_SVrefine2Falcon2Bionano_1523:HG3_10X_allpass_633:HG3_Ill_250bpfermikitraw_4476:HG3_Ill_GATKHCSBGrefine_2218:HG3_Ill_Krunchall_4607:HG3_Ill_SVrefine2DISCOVARDovetail_2485;NumExactMatchSVs=14;ClusterMaxShiftDist=0.04;ClusterMaxSizeDiff=0.04;ClusterMaxEditDist=0.04;PBcalls=4;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=-34;DistForward=-28;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=23;REFWIDENED=3:65179629-65179701;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2520.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:51:1/1:6:34:4:16:./.:0:0:0:0:0/1:6:33:./.:.:.:.:.:.
chr3	65524628	HG2_Ill_Cortex_5586	TAACTACCATCAAACAGACACATATACCAACTACCATCAACCAGAAACATGTACC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_4235:HG4_PB_assemblyticsfalcon_17287:HG2_PB_pbsv_3333:HG3_PB_pbsv_3277:HG3_PB_HySA_5139:HG3_PB_assemblyticsfalcon_17593:HG3_Ill_svaba_4268:HG3_Ill_scalpel_3365:HG3_Ill_Krunchall_4613:HG3_Ill_GATKHC_5546:HG3_Ill_GATKHCSBGrefine_2220:HG3_Ill_Cortex_2402:HG3_Ill_250bpfermikitraw_4483:HG3_Ill_150bpfermikitraw_4337:HG2_Ill_SpiralSDKrefine_11089:HG2_Ill_Krunchall_4635:HG2_Ill_GATKHC_5456:HG2_Ill_GATKHCSBGrefine_2229:HG2_Ill_Cortex_5586:HG2_Ill_250bpfermikitraw_4570;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4235:HG3_PB_assemblyticsfalcon_17593:HG3_Ill_svaba_4268:HG3_Ill_scalpel_3365:HG3_Ill_Krunchall_4613:HG3_Ill_GATKHC_5546:HG3_Ill_GATKHCSBGrefine_2220:HG3_Ill_Cortex_2402:HG3_Ill_250bpfermikitraw_4483:HG3_Ill_150bpfermikitraw_4337:HG2_Ill_SpiralSDKrefine_11089:HG2_Ill_Krunchall_4635:HG2_Ill_GATKHC_5456:HG2_Ill_GATKHCSBGrefine_2229:HG2_Ill_Cortex_5586:HG2_Ill_250bpfermikitraw_4570;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.037037;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=11;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=8116;DistForward=340;DistMin=340;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=3:65524627-65524704;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2521.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:./.:12:24:15:6:./.:0:0:0:0:0/1:27:27:./.:.:.:.:.:.
chr3	65920245	HG2_Ill_manta_936	ATGGTGCAGTACATTTAAGAAAAAGGCTCCCAACCTAATTATAAAACCGAGTCCCTCTTATATTGGGCCATTTAATGGTGCCAGATTG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_231:HG4_Ill_Spiral_269:HG4_PB_pbsv_3349:HG2_PB_pbsv_3337:HG4_Ill_GATKHCSBGrefine_2312:HG4_Ill_250bpfermikitraw_4620:HG2_PB_SVrefine2PB10Xhap12_2451:HG2_Ill_manta_936:HG2_Ill_SpiralSDKrefine_11092:HG2_Ill_SVrefine2DISCOVARplusDovetail_8563:HG2_Ill_GATKHCSBGrefine_2231:HG2_Ill_250bpfermikitraw_4574:HG2_10X_SVrefine210Xhap12_2508;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2508:HG2_Ill_250bpfermikitraw_4574:HG2_Ill_GATKHCSBGrefine_2231:HG2_Ill_SVrefine2DISCOVARplusDovetail_8563:HG2_Ill_SpiralSDKrefine_11092:HG2_Ill_manta_936:HG2_PB_SVrefine2PB10Xhap12_2451:HG4_Ill_250bpfermikitraw_4620:HG4_Ill_GATKHCSBGrefine_2312;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0342857;ClusterMaxSizeDiff=0.0342857;ClusterMaxEditDist=0.0465116;PBcalls=3;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-87;DistBack=37008;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=90;REFWIDENED=3:65920246-65920422;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:23:0|1:38:0:0:20:./.:0:0:0:0:0/1:29:9:./.:.:.:.:.:.
chr3	66049244	HG2_Ill_MetaSV_3239	TTGTTTTCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_454:HG4_PB_assemblyticsfalcon_17293:HG4_Ill_Krunchall_4843:HG3_PB_HySA_5147:HG3_Ill_Spiral_3615:HG2_PB_HySA_6303:HG4_PB_pbsv_3351:HG4_PB_SVrefine2Falcon1Dovetail_2016:HG3_PB_SVrefine2Falcon1Dovetail_2076:HG4_Ill_scalpel_3160:HG4_Ill_manta_802:HG4_Ill_SVrefine2DISCOVARDovetail_2505:HG4_Ill_GATKHCSBGrefine_2314:HG3_PB_pbsv_3282:HG3_PB_assemblyticsfalcon_17597:HG3_Ill_scalpel_3368:HG3_Ill_manta_744:HG3_Ill_SVrefine2DISCOVARDovetail_2490:HG3_Ill_GATKHCSBGrefine_2223:HG3_10X_allpass_634:HG2_PB_pbsv_3339:HG2_PB_SVrefine2PB10Xhap12_2452:HG2_PB_SVrefine2Falcon1plusDovetail_8018:HG2_Ill_scalpel_3245:HG2_Ill_SpiralSDKrefine_11094:HG2_Ill_SVrefine2DISCOVARplusDovetail_8565:HG2_Ill_MetaSV_3239:HG2_Ill_GATKHCSBGrefine_2233:HG2_10X_allpass_510:HG2_10X_SVrefine210Xhap12_2509:HG4_Ill_MetaSV_3378:HG3_Ill_MetaSV_3403:HG2_Ill_tnscope_340;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2509:HG2_10X_allpass_510:HG2_Ill_GATKHCSBGrefine_2233:HG2_Ill_MetaSV_3239:HG2_Ill_SVrefine2DISCOVARplusDovetail_8565:HG2_Ill_SpiralSDKrefine_11094:HG2_Ill_scalpel_3245:HG2_PB_SVrefine2Falcon1plusDovetail_8018:HG2_PB_SVrefine2PB10Xhap12_2452:HG2_PB_pbsv_3339:HG3_10X_allpass_634:HG3_Ill_GATKHCSBGrefine_2223:HG3_Ill_SVrefine2DISCOVARDovetail_2490:HG3_Ill_manta_744:HG3_Ill_scalpel_3368:HG3_PB_assemblyticsfalcon_17597:HG3_PB_pbsv_3282:HG4_Ill_GATKHCSBGrefine_2314:HG4_Ill_SVrefine2DISCOVARDovetail_2505:HG4_Ill_manta_802:HG4_Ill_scalpel_3160;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0809061;ClusterMaxSizeDiff=0.0809061;ClusterMaxEditDist=0.0809061;PBcalls=11;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=1217;DistForward=-301;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:66049245-66049574;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:18:0|1:18:1:2:14:./.:0:0:0:0:0/1:24:21:0/1:22:5:.:.:.
chr3	67493695	HG2_10X_SVrefine210Xhap12_2512	TGAAATTAGATCTCGGACCGCCGGGAGGATGGAGTTCAGCGGGCAGCGGAGCTGTCTCAGTCTTTGCCGCCGCGCCGGCGAGCGCCCCTCGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGCGGGGCCCGAGGGCAAGGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTGTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCATCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACTCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCACCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGAGGGGTCAGCCCCCCGCCTGGCCAGCCGCGCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCGTCCGGGAGGGAGGTGGGGGAGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCAGGAGGGAGATGGGGGGGTCAGCCCTCCCACCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGGTTAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAACCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGTGTCAGTCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGTCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCACCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCCCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGAGCCCAACCGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAGAAAATGAAAGCTGCAATAGAAACTCATAAATGAAAAAATTATCTCCTGACCATTTTTGAGAGAATGAGAGACATATTCTGCTCAGTGTAAAAGTGGTTATTAAAGTTATTTTGAAAAATTTCATTTAAAAAAAAAAAAAATGTCATAGAAGGAGGAACTGGTTATTCTCAACTGCAGCGACAAGTTCTGTGCTAATGAGTAACTTTCTTCAAAATGGGGTGATTTCTTAGTATAGCAGACTACACAGACATAATCAGATGTGACCTATCCCTTCAGCCATAGTTCATCCTTGTTAAGAATATGTTTATTCAACCTTGAGGAGGTTGGGATGATGCCTAAGAGAAGAACCAACTTAGGCTTCTAGACGGACCTATCGGGAGACCTGTTCCAAGTACCAATAATGTCTCTTCTTCAAAGATGTGGGCATTGGTGACCCACTATTAGAGATTTTATACAAGTTTTGGGGCTATCAGGGACCTTAGAGATCGTCTAGTCTGGATTCAAACATTAATCCAGGTATCCCATCCTCAAAGATTGCCAGGGAGCTGCATAAGCTTCCCAGGTGATGTCAATGCGCAGCTGGATTTGGAAGTGAATGCCTAAGTAAAAAGGATAATTTAGGCAATCACTTCAAGGTTCATCCTTGGAAAGTGGATTGTTTCTACTTTTTGGCTGTTATGAATAATGCTGCTATAAACATTTGTATATAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_5008:HG4_10X_allpass_598:HG3_10X_allpass_636:HG4_PB_assemblyticsfalcon_17306:HG3_PB_assemblyticsfalcon_17615:HG2_PB_assemblyticsPBcR_17112:HG2_10X_allpass_511:HG2_Ill_Krunchall_4654:HG2_PB_assemblyticsfalcon_17712:HG4_Ill_MetaSV_3379:HG2_Ill_MetaSV_3240:HG3_Ill_MetaSV_3405:HG2_PB_HySA_6327:HG2_Ill_tnscope_341:HG4_PB_pbsv_3360:HG4_PB_SVrefine2PBcRDovetail_1745:HG4_PB_SVrefine2Falcon1Dovetail_2022:HG4_Ill_GATKHCSBGrefine_2318:HG3_PB_pbsv_3295:HG3_PB_SVrefine2Falcon1Dovetail_2085:HG3_Ill_SVrefine2DISCOVARDovetail_2499:HG2_PB_pbsv_3349:HG2_PB_SVrefine2PBcRplusDovetail_7422:HG2_PB_SVrefine2PB10Xhap12_2458:HG2_PB_SVrefine2Falcon2Bionano_1530:HG2_PB_SVrefine2Falcon1plusDovetail_8025:HG2_Ill_breakscan11_455:HG2_Ill_GATKHCSBGrefine_2236:HG2_10X_SVrefine210Xhap12_2512:HG3_PB_HySA_5171;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2512:HG2_Ill_GATKHCSBGrefine_2236:HG2_Ill_breakscan11_455:HG2_PB_SVrefine2Falcon1plusDovetail_8025:HG2_PB_SVrefine2Falcon2Bionano_1530:HG2_PB_SVrefine2PB10Xhap12_2458:HG2_PB_SVrefine2PBcRplusDovetail_7422:HG2_PB_pbsv_3349:HG3_Ill_SVrefine2DISCOVARDovetail_2499:HG3_PB_SVrefine2Falcon1Dovetail_2085:HG3_PB_pbsv_3295:HG4_Ill_GATKHCSBGrefine_2318:HG4_PB_SVrefine2Falcon1Dovetail_2022:HG4_PB_SVrefine2PBcRDovetail_1745:HG4_PB_pbsv_3360;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0636763;ClusterMaxSizeDiff=0.0636763;ClusterMaxEditDist=0.0636763;PBcalls=17;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-3104;DistBack=20797;DistForward=-3092;DistMin=-3092;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=3:67493696-67496812;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2524.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:97:1/1:0:25:0:36:./.:0:0:0:0:1/1:0:13:1/1:4:194:3174:.:.
chr3	68634770	HG2_PB_pbsv_3354	TACTCTTCTCAAGGAGTATCTTTGTGGTATTCTCTGTATTTCCTGAATTTGAATGTTGGACTTCCTTGCTAGGTTGGGGAAGTTCTCCTGGATAATATCCTGAAGAGTGTTTTCCAACTTGGTTCCATTCTTCCTGCCACTTTCAGGTACACCAGTCAAATGTACATTTGGTCTTTTCACATAGTCCCATATTTCTTGGATGCTTTGTTGGTTTCTTTTTACCCTTTTTTCTCTAATCTTGTCTTCTCACTTTATTTCATTAATTTGATCTTCAATCACTGATATCTGTTCTTCCACTTGATCGAATCAGCTATTGGAGATTTTGCATGTGTCATGAAGTTCTCATGCCATGGTTTTCAGCTCCATCAGGTCATTTAATGTCTTCTCTACACTGTTTATTCTAGTTAGCCATTCGTCTAACTTTTTTTCAAGGTTTTTAGCTTCCTTGTCATGGGTTAGAACATGTTCCTTTAGCTCAGAGAAGTTTATTATTACCGACCTTCTGAAGCTTACTTTTGTCAACTCATCAAAGTCATTCTTCATCCAGTTTTGTTCCATTGCTGGTGAGGAGCTGTGATCCTTTGGAGGAGAAGAGGCACTCCGGTTTCTACAATTATCAGCTTTTCTGCTCTAGTTTCTCCCCATCTTTGTGGTTTTATCTACCTTTGGTCTTTGATGTTGGTGACCTACAGATGAGGTTTTGATGTGGATGTCCTTTTTGTTGATGTTGAAGCTATTTCTTTCTGTTTGTTAGTTTTTCTTCTAACAGTCAGGTCCCTCTGCTGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTATCACCAGTGGAGGCTGCAGAACAGCAAATATTGCTGCCTGATCCTTCCTCTGGAAGCTTCATCCCATAGGGGCACCCGCCTGTACGAGGTGTCTGTCAGCCCCTACTGGGAGGTGTCTCCCAGTTAGACTACACAGGGGTCAGGTACCCAGTTGAGGAGGTAGTTTGTCCATTTTCAGAGCTCAAACACCATGCTGGTAGAACCACTGCTCTATTCCAAGCTGTCAGACAGGGACATTTAAGTCTGCGGAAGTTGTCTGCTGCCTTTTGTTCAGCTAAGCCCTGCCCACAGAGGTGGAGTCTGTAGAGGCAGTAGGCCTTGCTGAGCTGAGGTGGGCTCTGCCCAGTTTGAGCTTCCTGGCTGCTTTGTTTACCTACTTAAGCCTCAGCAATGGCGGACACCCCTCCCCCTGCCAGGCTGCAGCCTTGCAGGTCGATTTCAGACTGCTGCACTATCAGTGAGCAAGGCTCTGTGGGTGTGGGACCTGCTGAGCTAGGCACGGGAGAGAATCTCCTGGTCTGCCAGTTGCTAAGACCATGGGAAAAGTGCAGTATTTGGGCAGAAGTGTACCAGTTTTCCAAGTACAGTCTGTCACAGCTTCCCTTTGCTAGGAAAGGGAAATCCCCCAACCCCTTATGCTTCCCGGGTGAGGTGATGCCCCGCCTTGCTTCAGCTCACCCTCCATGGGCTGCACCCACTGCCCAACCAGTCCCAATGAGATGAACCAGGTACCTCAGTTGGAAATGCAGAAATCACGTGTCTTCTGTTTCAATCATGCTAGGAGCTACAAATCATAGCTGTTACTATTCAGCCATCTTAGAATGAAAAAAAAAAAACTCCTAATTTCTTTTTACCCATAAATTTAAGGAATACACATCCTGAAAACATAATTCAAACCCCATCAATTATTTTGAAATTCAAAATAATTCAATAATTTTTTAAAAATTCAAAATAGTTTTAAAACATCTAAAGGCAAAAACTAGTCTTCCTCATTTTTCCCAATGTCATTGCCTTTGCCATAACTAAAAAAATATCTGGATCAGGAGTCAATAACCTGAAGGACCGAAGGCTGGATTTTGTTTTTGCGCATTATGTCAAATAAATTTTTCTTTTTACATTTAAAAGGTTTGTTTTAAAAAGAAGAAAAATAAGATATTCAGCAGAGACCAATGTGTGGCCTACGAAGCCTAAAATATTTATAGTCTGGCCCTTTACAGAAAACAATTTTGACCACTGGTGTAGACTTCTAGACCCTTTTCTGGGTATGCATCTATACACACACACACATACAGAAATCTATAGTTTGTTTTTTGATTTGTTTATAGATGTAAGATTTTATTTGTTCATTGTCCTGTGAGGTGCTTTACTTAATAGTGTATTTGTATATATGTATATAGCATATTTGTAGATAGTTTCATGTCAGTATTTTTTTTTTTTTTAGATGGAGTCTCACTCTGTCACCAGACTGGAGTGCAGTGGCACAATTTTGGCTCACTGCAACCTCCAACTACCTGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGCAGCTAGGATTATGGGTGTACACCACCACGTTCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTTTCAATCTCCTGACCTTGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTGCAGGCATGAGCCACTGCACCCAGCCTCATGTATTTTTATGTCAACTGCTTATTTTTTTACCTCCTAAGTAGCAGTTTATACATATGTTTCCTGCCTCTATAAAGCCATTGCCCCTCCCCACTTTGGAGCAACATCTTCTCTGAAAAATCTTACACACATTTTCAGTTTAGTTCTCAGCTGTGTGCCTCTGTCTTCCATTTTAAATATTCATCCATTCATTTATTCTTTCTAAAAATATTTATTGGCACATACTATGTGCCAGGTACTCTTCTAGACCCTGAGGATTCAGTGGGTTTTTTTTTGTAAAAATAAAAGACCAAAATTCCTGCCCTTGTAGAGCTTACTTTCTAGTAGGAGAAACAGATGACAAATAGAATTACTAATAATACATGAAATGTAATTGGAGGCAAAGAAAGGCAATATGAAGTGACAGTTGGTAAGGGTTGAAATTTTAGGTCAGGTGTCATACATAGCCTCAGTGAGAAAGTGACTTCTGAGAAAAGATCCTGAGGAAATGAGGGTGCTAGCCATTAGAATATCTGAGGGAGAACACTATGGACACGTGCAAAGGCCTCAAGGTACATGCATGCCTGGTGAACCTGAGGAAGACAAAAGATAGCAGGAAGATCAATATGGCAGAAGCAGAGTGAATGAGGAAAAGAGTAGTGGAAAGGGAAGTTAGAAAGGGAAGGAGGACCCACAGTTTATGGGACCGGTGGGTTACATTAAGGACTTTGGTTTTTACTCCAAGTAAGGGATGAGAACCTTGGGAGGATATTGAGTAGAAGAGTGATATGATCTGATTTCCTTTCAATAAAATCACTCTGGCTGCTTTGTTGAAAATAGATCAAAGGGGCAGAAGGACAGAAGTAGATGCAGCTAGACAAGTTAGGAAGTTGTGATGGCAATCCAGGTGAGACATGATGGTGGCACAGAAGGGAGGGGTGGACATAGAAGGAGTAAGAAATGGACACTATAAAAAGTACACAAGAGGGGAAAGCCACTCTTGAGATTGAGGCATATTGATCAATAGGTAATTCCCTCTTGTTTCAAAAATGATGAAAATGTGTTACAAGTAGAACCTTCAGATCTCAGGGAATGGCCAAGGTCAGCCTAGCAAATAAATCTTAGTGTCTGAGATCAATCTTACATGGAACAAACACCCTTAAGGTAAGGGTTCATTCATTATTTTAAGATCAAGACCATGTTCTCATGAAGTGTCATCTTAGAAGTTTAGTTGTAGGTCTCACTGTAAAACCAGTCAAGCTGGGAGAAGAAAATTACATTTCTCTTTGCAACTGCTCCAAGAAAGAGTCTAATCATACCTGCATTTTTAAACAGAAAAATAGAGTCTGAGTCTAGGCCAAAGAACAAAGAAGTTTCCAGAGAGCAGGGATTTTTGGCAGCAGACGTGAGGTGAGTGAGAATAGACCCTAAGGAAACAACCAGCTGTGGTCATACCAGGCTCTTTGTCAGTCCCCTGGAGGCTGATTTTCAGCAGACTGGGACAGCTCTACTGGTCTCTCAGGAGTCTTGTTGACTCCCTGCAGCTATCAAAGGAGGCCATATATCGGTATCTCTCTGCTTCTCAAATGAGAGAAGCATTTTTCTTTTCTTTATCCCTGCAAATCCCAGAAAATTGAGGTAAGGTCTGGAGAGTTGAAATGCCTTCTCAGAGGCATAGTGCCAGGGATTAGTTCTAACTCAAGAGTCTCAGAGACAGTGAGACAGGGGATGGAAAGGAAGAGGAGAGAATCTGAAACCCAGATGGTCTTATGACTTTATTAAAGCTTTCCCTACCTTTGCATCATAATTATGTTGGATATGCAAACTGGGATTCGCATATGCTAAGGTATATAAAATCATTATTTCTTTAATGAGACACACAGTGAGTTTGGAGGATGTCAGGACAATGTTGTTTAATTCCTGGCTCCAAGGAAAAGAGGAAGCCCAAGATATGTTTCAACCTTTGGAAGAAAAAAACTCTACTACTAATACTGTTATATTGATTGGTTCTTTTGATGACAAATGGCAGGAAAATGATAAAAACTGACTCAAAATAGAATGTATTGGCTCATCTAGCTGTAAAATATAAAAATGGACCCATGGCATAATCAAGACATTTACACACTGGGCATAGCAGATTCCAGGGGGCTCAGATGATAGTGGTTGCCTTTCTTTCTCTAATTTTCCATTCTACTTCCAATATGTGTTGGACTCATTTTATTCTCCTGCCATGTAATTGGAAAGATGACAACCAGAAGTCCCATGTATACATCATTTTTCTTATAATTTGTTATCCAAACATAAGAGGATACACCTCCATAGTTCCAGCAGAAAGGTCCAAAGAGAACTTTGGCTTATCTAGGTTAAATATCTATTGCCACACCTGTCGCTGCAGCCAGAGGGGTGGGGTTTGTTAGCCAGAACTGGATTACATGCTCATCCTTGGGCTCATGGAGCAAGAGCAGCCACCCACGAAACCATTCAGAAAGTGGGAGGGATAATTCTCCAAAGAAAGTAGAATTAAGGAGTAAAAATATATGTCTGCTATAATCATATTTCTTGTTTCTAGGAGGAACATATCTTCTTAGAATACCCACAATTTTGTGTTTCCAAACAATGTATGTGTACATATTAGTAGCATAACTTTCAAGCTAGTATTTTAAACTTCTTATTGAAGTGTAATATGCATACACACAGACAGATAACTCCACATTTATCAGGGTACAGTTTGATGAATTATGTGGTAGTATTACATTTCTTCTCATAAGGTTGAGAAGTGTTTCCTATCTTCAAAAACAGCTATACAGGCTATAGCTTAAAGGAGACAATAGTTTGGTGGAAATATATGGATGAAATATTCAAGAAGGTAGATTTGAGGAGCAGGACAATGGGAACTAAATGTCTGCAGCTCATGGACTAACAAAGCTTAAAGGTAAGCTGGCCCTGTA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3242:HG4_10X_allpass_599:HG4_Ill_Krunchall_4860:HG2_Ill_Krunchall_4657:HG2_PB_assemblyticsPBcR_17117:HG2_PB_assemblyticsfalcon_17717:HG2_10X_allpass_512:HG2_Ill_tnscope_342:HG4_PB_pbsv_3364:HG4_PB_SVrefine2PBcRDovetail_1748:HG4_PB_SVrefine2Falcon1Dovetail_2025:HG4_Ill_SVrefine2DISCOVARDovetail_2513:HG4_Ill_MetaSV_3383:HG4_Ill_GATKHCSBGrefine_2321:HG3_PB_SVrefine2Falcon1Dovetail_2088:HG2_PB_pbsv_3354:HG2_PB_SVrefine2PBcRplusDovetail_7425:HG2_PB_SVrefine2PB10Xhap12_2461:HG2_PB_SVrefine2Falcon2Bionano_1533:HG2_PB_SVrefine2Falcon1plusDovetail_8028:HG2_10X_SVrefine210Xhap12_2514:HG2_PB_HySA_6340;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2514:HG2_PB_SVrefine2Falcon1plusDovetail_8028:HG2_PB_SVrefine2Falcon2Bionano_1533:HG2_PB_SVrefine2PB10Xhap12_2461:HG2_PB_SVrefine2PBcRplusDovetail_7425:HG2_PB_pbsv_3354:HG3_PB_SVrefine2Falcon1Dovetail_2088:HG4_Ill_GATKHCSBGrefine_2321:HG4_Ill_MetaSV_3383:HG4_Ill_SVrefine2DISCOVARDovetail_2513:HG4_PB_SVrefine2Falcon1Dovetail_2025:HG4_PB_SVrefine2PBcRDovetail_1748:HG4_PB_pbsv_3364;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0125193;ClusterMaxSizeDiff=0.0125193;ClusterMaxEditDist=0.0125193;PBcalls=12;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-5483;DistBack=67324;DistForward=-5481;DistMin=-5481;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:68634771-68640256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:56:1|0:0:29:27:1:./.:0:0:0:0:0/1:55:13:0/1:382:200:5410:.:.
chr3	68739683	HG2_10X_SVrefine210Xhap12_2515	ATTAAAGGTAGAGTCTTGCTATGTTGCCCAGGCTAGCCTAATCCTTTTTATTTCTGTAAAATCAGTTAGAATGCCTCTACTTTCATTTCTGATTTTAGTAATTCTAAGATTTTTCTCTTTTTCTGTCAGTCTAGTTAAAGGTTTTTAAATTTTGTTGATCTTTTCAGATAACTAACACTTTGTTTCCTTGATTTTTCTGTTGTTTTTCTCTTCTCTAGTTTATGTCCACTCTAATCTTTCTATTTTTTTTCCTTTTGCTACCTTTAGGTCTACTTTGCTCTTCTTTTTCTAGTTCCTAAGGTGTACAGTTTATTGATTTGAGATCTTTTTTAAAGTATACATTCGCAGCTCTAAACACCCCTCTTGGTGTTGCTTTTGCTGCATCCTGTTAGCTTTGGTTTATTGTGTTTCATTTAAATTCATCTCTAAGTATTTTCTAATTTCCCCTGTGATCTCTTCTTTGACCCAGTTGTTATTTAAGAGCTTTTTTTTTCCCATAATTCCCTTTACCAGGTTGAAGGAATTTTCTTCACTAGCTGGCTTGCTAAGAGTTTTTATAATCGATGGGCATCACATCATGTCCAGATATATTTTTCCATGCATCAAGATGACCATTCTTCTTTATACTAGTAATACAACAATTTACATTAATTGATTTTTAAATGTTAAACCAATCTTCAGTTCCTGGGGTTAAACCAATCTTGAGTTCCTTGGGTCAATCCAAGACGGTGGCTGCTAGCCACATATAGCTATTGAGCCTTTAAAATACAGTCTTTTTTGAGATGTGCTATAAGAGGAAGATATACTCTAGATTTATAAGATTTATTATTAAAAAATGTAAAATACCTCATAATTTTTACATTAATTACTGAAATAAAATTTTGGCTCTATTGGGTTAAACAAAATTATTAAAGTTAACATCACCTATTAAACTCTAAATGTGGCTTATTGCACATTTAAAATTATATATGTGACTCATGTCTGTGTCTCTTATAATATTGGTCAAAATATTTTTTACGTATGTCTAGATTTAATAATATTTTGTTGAAGATTTTTGTGTCTTTTAAAGAGTATTCAACTCTAGTTTTCTTTTAAGGTCTTTTTCTGGTTTTATTATTACGCTGGTACTGGACTCAGGGTGGGAAGGGTTCGTTATTCCTTTATCTTCAATGGAGTCTTTATAGGGTTGGTATTATTTCTTCATTAATTTCATGATAACACTAAACAATAAAACTGGGCCTGCAGTATGTTTATAGAATGTCTCTAATAGAGAACTATTTCAAGTTGTATATTTCATGTTAAGTTAGTTTTGGTAGTCTGCATCTTTCAAAGTATTTGTCCATTTCTTCTATGTTAACAAGTCTATTGAAATAAAATTGTTTATAACATTGCATCGCTATTCATTTAATAATGTAGGATTTGTAATTCCTGCTATGGGTAATTCATGCTTTCTTTCATCAGCATCAGTCTGACTAGAGATTTATCAATTTTATTATTTCATTCAAAGAACAGTCTTTGATTTCATTGCTTCTTCTCTATTGTTTGCTGGTTTTCCACATAATTGGTGTCCCCTTTTATCTTAATTACTCTCTTCATTCTACTTATTTGGGGTTTTATTTCATCTTCACTTTACACTTTCCCTAGTGATGGAGGCCTTTAGAGTTCTAGACTGTCCATGGAGAGTCTCCTATCAGAATCTCCAATGTGTATGTTTCCGTGGGCTCTGACTTCTCCCTGAGAGCCTTTTAAAGTTAAACTTGAAAAGACCAGCAAATACCCTCAGAGCATAGCTTCTATTCCCTGTTTAATTCTCTGCCTTTTCAGTTTTTCTTCCATTTTTGGCTTACTAATGTCTTACTATTCTGTTTGTTGTTTTTAAGAAGACTTATTTGATCATTTATCTAGCACTTCTTGTTTTTCCATGGGAGGATTTGTATGTAAAAGCTAGCTTCCCATTACAAAAGCTGTAGTCCCTAGTAGCATTTCCATTTTGTGGGGCCATTGTCTCAAAGCCACTGGTGTCTTTTTCATTCCCTTCTCATATTCCACCAGAACGTTGACCATTGTGCTAGTTTCAGAACATAGAAGAATACGATGTTGAATTCACTCCCATGTCTTACATATTAATTTTACTCCTTTTAATAATATTTGTATTTCTTGAGAGACTGTAAGTAGAGACTGTAATATTTTGTTTTTATGATTCCAAAAGTAATAACCCTTGAACATAGTTTTTAAAGAATGAAGAGAGAGGCACGGTGGTTCATGCCTGCAATCCAAGCACCTTGGGAGGCCAAGGTGGGCAGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGGAAAACCCTGTCTCTACTAAAAATACAAAATTTTCTGGGCATGGTGGCAGGTGCCTGTAATCCCAGCTACTCACGAGTCTGAGGCAAGAGAATCACTTGAACCCAGGAGGCGGATGTTGCAATGAGCTGAGATTGCGTCACTGCACTCCAGCCTGCACTCACTGCACTCACTCCACAGAGTGAGACTCTGTCTTAAAAAAAAAAAAAGAAAAGGTACCTATAGCTCTTCAACCTAAAGATAACTGCAATGAATAAGTTGCCGTATTCTCTGCCAACAGTTTTCCATGTAAATAGGTATAGACAGAAGGGCTAACCAAGTGACTTTGTTTAAAAGAAATATTATGTAGCTGCACTGTCCAAGATGGTGGCTGCTAGCCACATATAGCTGTTGAGCTTTTAAAATATAGTCTTTTTTGAGATGTGCTATGAGAGGAAGATATACTCTAGATTTATAAGATTTATTATTAAAAACTGTAAAATACTTCATAATTTTTATGTTGATTACTGAAATAAAATTTTGGCTCTGTTGGGTTAAACAAAATAAATTATTAAAATTAACATCACCTATTAACTCTAAATGTGGCTTCTAACACGTTTAAAATTACATATGTGGGCCAGGCACGGTGACTCACTCCTGTAATCCCAGCACTTTGGCAGGCCAAGGTTGGCAGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACAGTGTAACCCCATCTCTACTAAAAATACAAAGAATTAGCTGGGCGTGGTGGTAGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAAGCGGAGCTTGCAGTGAGCGGAGATCACGCCACTGTGTTACAACCTGGGCGACAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAATTACATATGTGACTCATGTCTGTGTCTCTCATAATATTTCTATTAGATAGTGCTAATATATGCTATTTTATATTCTTTTTTCAGTCAACATTAGCGCCGGCACTTTGTGCATACCACAAATAATTCTTCAAGATTACTATTTTAATAGCTATTCAACTTAAATCATTTAGGGATACTATAGATTGTAGCATCTAGAAACTTTGTGTGTGTGTATGTATGTGTGTACGCGTGTGTGTCTGTGTATGAGACACTTAGTTTTTCTTTGTTGTTGTTGTTGTTGTTATTGTTGAGACAAAAAGTTGATTCTCTTGCTTCAACTGATTCTCATGCTTCAGCCTCCCTAGTAGCTGGGATTGCAGGTATGCACCTCCACCCCCAGATAATTTTTGTTTTGCTTTTTTTTTAAAAAAAAAAAAAAAAGCAGAGATGAGGTTTCACCATGTTGACCAGGCTGGTCTCAAACTCCTGGCCTCAAATGATCTGCCCATCTCAGCCTGCCAAAGTTCTGGGATTACAGGCATGAGCCACCGTGCCGGCCAATACTTAGTTTTTCTTGCTGTAAAAATTAGATTCTACTCCTCAGTTATTCAGCAAAAATTTGATGACTATGTGTTCCTTGTTCATTTGCTTCTTTCCTCATTTCTTCGTTTTTTTCTCTTCCTCCTCTTATCCATTTACCAAATATTGTTGAGGGCCCTGATAGTCTATAGGTAGTATAACATAATGATTTAGCATAATTGCCTCTGACCAGACTGTCTGGGTTCAAATCCTTGCTCTTGACTTAGCACCTCCATTACTTCAGGCAGGTTACTTAACCTCTCAGTTACTGAGTTTCTCAGTGACAATATAAAGATTATATTAGGTTGGTACAAAAATAATTGCAGTTTTTGTCATTGAAAGTAATGAAAGAAGCTGCAATTACATTTGCACCAATAATAGTCGTAGTTACTTCATATGAAGTTGTAAGTAATAAAAAGGATTTTATCAACACATTTTGAACAAGGCCTAGCACATCTTCAGTTCCATGTACGTTATTATCGGTGTTTGCCACCTACTAACAGTCCAGCAGGGAAGGCAGGCACTAGATAAGTTATTGTAAATATGCTCAGTATCATGAAAGGACAATCTTTGAAAGTTAGTCCAATGAATAAGAAGTGTTCATTCCTCTCCGGTAGTTCAGTCTGCTAGGGGAGAAAGACATGAAAATAAATCATCTTAATACAGCAGGCTGAATGCTAACAGGGACTATGTTCAAAATACTGTAGCAAATAGGAAAGAGGGGCTGGCTGCTCCTGGTAGCTTCTAGAGGCAGTATTCTCTGGGCTGAGTCTGGAGGATTGGCTTTTGCTTTTAACTCTAGTCATTTGATTACATGTGTAGATTCATAGAAGACGTTAATATCAGTCCACAAAATAAAATGCTTCGTGTTTTCATAAGTATATTAGGAGTTTATTTGCATCAGCTGGCTACATTTTATATAGAGAGCAGATTCCATCAGTATTTTCACGTGGTGATTCTTAGAATGGAGACACAGAAGGTATTTCAGCAAACAAAGGAATGTCTTTCACAATAGAAGTGTAAACAATGCCAATTCAGTTCAGAGATGACTTTCTTCTTTTGAAGATGCCTGTTTTCAAGCAAAATACAAAATACACTAACAATAAAAGATGCCAAATTTTATCAAATGAAGTAGGAAGCCTTTCCCTTAAACTAAAAGATGTAAACAGTGAGCAAAAGAGAGCTGTCAGGAGTTTAAAAATAAGTTTGATTTTAAAATTTCTTTGCTTTTAAAATGGGAAATGATAATGACTGAACTTCATGAAAATACTGCTTAGTTAAATTATCCAATCTAAGTATAATGCTGAGGTGACTTTATGTGTTTCTAACTCTTTTTCCTAGTGATAAGAACTACACTTAAAACTGCCTTTATTCAATCAAGCCTTGGATCTGATAAGTTAATAGTCAATTTGCTTGGCAAAAGCAATTTGATTAAATGCTTCTCTTTGTGCTGGAAAAAATATTGAATTGGAAAGTTTGCCCAAAGTCATTTGTTGGCTGGGCATGATGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGCGGAGGCCAGCTGATCACCTGAGGTCAGGAGTTCAAGAATAGTCTGGCCAATTTGGTTAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCCTGGTGGTGGGCACCTGTAGTCCCAGCTACTTCAGAGGCTGAGGTAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCCATGAGCTGAGATCATGGCACTGCACCCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAAAAAGTCACTTGTCCTTGGTTTCCCTTTCTTCACACCATGTCTATCTAATAAGTTAATGAGTAGTAGCCAACCTTAAATAGAAGGAATGCCTATGAATGAATGGCATGAAGATTTTTAGTCAACACTTGTAATACAGTGTATCTTTCCCATTGTTTTGTCATTCAATTAATACCAATGAGGTTTTTTATTTGTTTTCCTTCACCTTCTCATTGGGAAGCCAAGATGTTTGTAAATCCAGATTAGTGATGATAGCAGTGAACTATACCTGCTCATAAATCTATTTGTGCTAGTGTATTTTGACGAGCAAAATGTATATCCAACTCCCACTCTACATATTTCTTTTTTCCCCAAATTTATAGCAATACCAAAAAGGATGCAGCAAGGGACATACTTATTCTATATGTTTTTGTGCTTGTATTTTCTTTGTAGATTCATTTCTAATTTAATTATACTCCCTGCTTTGCCATGATTTATGTATGATTATAGTTTGTCTTTGGATATATAATTCTATCTGCATAAAATATGCTGATTAATGTAGGCTAATATGTTTCAAATTAAAAATATGTGTTCTTTAAAACTATTTAATATGTTGAAGAAACTTTTAACACAATTGCTGATTGGGACACACAAATTTCTCTTAAGGCAGTGCTGAGTGATAAAACATAAGGTACATGTGTATAATTTGTGAAACTATATCGCCAAGGGATTCTGTGTTGATTTAATGTCTCTCTCAACTTCATGAAACTAAAAGAAAGGTCTGGTCCAATACTTTTCAATAAAGAGTGAATTTTCCTCCAGGGAACATTTGGCAATATACGGAGACAATTTGGTAGTTACAACTAGGAGTGGGTGCCAATAGTGGGTAGAGGCCAGGGATGCTGCTCAACATTCTACAGTACACAGGGCAGCTCCCTTCTCTAACAGAGAATTATCTGGCCCAAAATGTCAATATTGCCAAGATTGGGAAACCTTGGTCTAATCTGGTGAATGTAAAGCCCTTTCATATCCTTTGGTGTGGACATTTATGTTTCTCTAGCTATATTAGCCCTTGTCACAGCTACCCAAGCAACATCTCTCCTGCTTAATTGATAAGTGAATACCTCAATACTTCTCTAGCTTTAACTAAATAAATTAGCAATGGTCCTGAAAAATTGAGTTGACTGAGCTAATCCCATCTGCACCATCACAGGCACACATGCACACACACATACATCCCCTCACTCTGTGTACCCCAGCATAGAAGCTGTCCCTCTCACATATATCTAGGCAGCCCAAAAATTGCAATAGTTATTCTGACTTGCAGACAGCATGCCCTGCCATGTTGGTTCTTTGTGGCTTTTTCATGAACCCAGTGAGAGAAGCAGTGGTCAATAGGGAAAGTTCAGTGGCACCACTGTGGGTAGTCACTTTCTTTCCAAGCTAGCTGTGATTTTTGCCAAGTCTAAGCTCTTGTGTGCCCTGGCTTTGAACACCCTTTTCAATGTAGTTGCAGTGGAGATGAGTGGATATGTGTTTACTTTCAGTAGGCCTGCTGTTTTGGCCTACCATTCCCAGTGGTTTGCAGGACAGAGAAAATGATACTGAATAATACAAATTGAGTAATTCTGTGTTCCAGAGACTAATTCTGCAGACTGTGCCAGACACATCTTCCTTTACAGGTATGAGAAATGTATGAGTATTTTCCTTTGAAAAGCTCAAAGGAGCTGATGAGGATTTACATTGTAGGTGTTCAGAGAGCCAAATTTCAAGAGGAAAGAAAGAGATGTCATAGGGCCTGTCTCTGTTCACTCAAATACCTTAATTTCTACTCCTGGATGTCAGTCATTCAATATGTAATTACCAAGTATTTACAGCATGCAAAGCATTCATGTGGAACTGTTGATAGAAGGAAGAACACAATATAACTTCTTGTGATTGAATTCCTCAGAAAGTTTGGGAAATAGGTGAAATGATCTTGCACAAGAGTGAACTCAAGGCAGGAGGAAAGTCATAAGTAACTGAACTCAGACATGGACTTATAATCTTTTTAACATAGCTTAGCAAGTGATCATAACCAGTCCATGGAAGATGGTACCTGAGGTGAACTCTGTTTGCCGTCTTTGGGCTGTGGACTCTAAGAAGTCACAGTGGTTTGAAGAGAACATACAAATAAGTAGATGGGATTTTCATAGCAAGAAGGATATTTCTAGTACAGCAGGGACACAATTAAATCATAGTGATAGGAAAGTATTTGGAGAAGATTACAAAGGCATGTGAGCAGGGATCTGAGGTCTCATGAGGTAAGACTGTCAGACCACTGGTTTCGGGGGGGAAAAGGTAAGAATGTAGTTTTAGAATTATGTACCTTCACCCCTTCTTTCTTATTCTCAGCATTCTGAAATTCTCCTCCTCTTCACCTTCTTTTTCCACTTTTCTTTCCTCTCATTTTTTAACTCTGCCTTTCTGATATCATTCATCACTAAGACGGTTGACAAGAGGAATTTAATAATAAAGAGGGCTCCCCTCTTCTTGCTAAAACAGTTTGACCCCCTTATGGTTCTATAATTTATTACCGATTCCAGCATTCTGCAAATGCAATTT	A	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3384:HG2_10X_allpass_513:HG3_10X_allpass_637:HG4_10X_allpass_600:HG2_PB_assemblyticsfalcon_17720:HG4_PB_assemblyticsfalcon_17314:HG3_PB_assemblyticsfalcon_17622:HG2_PB_assemblyticsPBcR_17120:HG3_PB_pbsv_3299:HG2_PB_pbsv_3355:HG2_Ill_breakscan11_456:HG2_Ill_SpiralSDKrefine_11109:HG2_PB_PB10Xdip_20899:HG2_PB_PB10Xdip_20898:HG4_PB_pbsv_3365:HG4_PB_SVrefine2PBcRDovetail_1749:HG4_PB_SVrefine2Falcon1Dovetail_2026:HG4_Ill_SVrefine2DISCOVARDovetail_2514:HG3_PB_SVrefine2Falcon1Dovetail_2089:HG3_Ill_SVrefine2DISCOVARDovetail_2503:HG2_PB_SVrefine2PBcRplusDovetail_7426:HG2_PB_SVrefine2PB10Xhap12_2462:HG2_PB_SVrefine2Falcon2Bionano_1534:HG2_PB_SVrefine2Falcon1plusDovetail_8029:HG2_Ill_SVrefine2DISCOVARplusDovetail_8579:HG2_10X_SVrefine210Xhap12_2515:HG3_Ill_MetaSV_3408:HG2_Ill_MetaSV_3243:HG3_PB_HySA_5179:HG2_Ill_tnscope_343:HG4_Ill_Krunchall_4863:HG2_Ill_Krunchall_4662;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2515:HG2_Ill_SVrefine2DISCOVARplusDovetail_8579:HG2_PB_SVrefine2Falcon1plusDovetail_8029:HG2_PB_SVrefine2Falcon2Bionano_1534:HG2_PB_SVrefine2PB10Xhap12_2462:HG2_PB_SVrefine2PBcRplusDovetail_7426:HG3_Ill_SVrefine2DISCOVARDovetail_2503:HG3_PB_SVrefine2Falcon1Dovetail_2089:HG4_Ill_SVrefine2DISCOVARDovetail_2514:HG4_PB_SVrefine2Falcon1Dovetail_2026:HG4_PB_SVrefine2PBcRDovetail_1749:HG4_PB_pbsv_3365;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0040325;ClusterMaxSizeDiff=0.0040325;ClusterMaxEditDist=0.0040325;PBcalls=17;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-8175;DistBack=12564;DistForward=33166;DistMin=12564;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=3:68739684-68747862;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.9994;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=2526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:146:1/1:0:20:0:22:./.:0:0:0:0:1/1:0:24:1/1:1:435:8233:.:.
chr3	68870474	HG3_Ill_manta_749	CTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCACCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTG	C	20	PASS	ClusterIDs=HG2_PB_pbsv_3356:HG4_PB_HySA_5021:HG2_PB_assemblyticsfalcon_17722:HG3_PB_assemblyticsfalcon_17624:HG2_PB_assemblyticsPBcR_17122:HG4_PB_assemblyticsfalcon_17316:HG4_Ill_Krunchall_4865:HG2_PB_HySA_6344:HG4_PB_SVrefine2Falcon1Dovetail_2027:HG4_Ill_Spiral_271:HG3_Ill_Spiral_3636:HG2_PB_SVrefine2Falcon2Bionano_1535:HG2_PB_SVrefine2Falcon1plusDovetail_8030:HG2_Ill_Spiral_233:HG2_Ill_breakscan11_457:HG4_Ill_MetaSV_3385:HG3_Ill_MetaSV_3409:HG2_Ill_tnscope_344:HG2_Ill_MetaSV_3244:HG4_PB_SVrefine2PBcRDovetail_1750:HG4_Ill_scalpel_3171:HG4_Ill_SVrefine2DISCOVARDovetail_2515:HG4_Ill_GATKHCSBGrefine_2323:HG4_10X_allpass_601:HG3_PB_pbsv_3300:HG3_PB_SVrefine2Falcon1Dovetail_2090:HG3_Ill_scalpel_3384:HG3_Ill_manta_749:HG3_Ill_SVrefine2DISCOVARDovetail_2504:HG3_Ill_GATKHCSBGrefine_2231:HG3_10X_allpass_638:HG2_PB_SVrefine2PBcRplusDovetail_7427:HG2_PB_SVrefine2PB10Xhap12_2463:HG2_Ill_scalpel_3260:HG2_Ill_manta_940:HG2_Ill_SVrefine2DISCOVARplusDovetail_8580:HG2_Ill_GATKHCSBGrefine_2240:HG2_10X_SVrefine210Xhap12_2516:HG3_PB_HySA_5182:HG4_PB_pbsv_3366;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2516:HG2_Ill_GATKHCSBGrefine_2240:HG2_Ill_SVrefine2DISCOVARplusDovetail_8580:HG2_Ill_manta_940:HG2_Ill_scalpel_3260:HG2_PB_SVrefine2PB10Xhap12_2463:HG2_PB_SVrefine2PBcRplusDovetail_7427:HG3_10X_allpass_638:HG3_Ill_GATKHCSBGrefine_2231:HG3_Ill_SVrefine2DISCOVARDovetail_2504:HG3_Ill_manta_749:HG3_Ill_scalpel_3384:HG3_PB_SVrefine2Falcon1Dovetail_2090:HG3_PB_pbsv_3300:HG4_10X_allpass_601:HG4_Ill_GATKHCSBGrefine_2323:HG4_Ill_SVrefine2DISCOVARDovetail_2515:HG4_Ill_scalpel_3171:HG4_PB_SVrefine2PBcRDovetail_1750;NumExactMatchSVs=19;ClusterMaxShiftDist=0.126095;ClusterMaxSizeDiff=0.126095;ClusterMaxEditDist=0.126095;PBcalls=17;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-289;DistBack=4501;DistForward=15188;DistMin=4501;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7158;REFWIDENED=3:68863333-68878486;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2527.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:78:./.:0:4:0:11:./.:0:0:0:0:1/1:0:30:./.:.:.:.:.:.
chr3	68890204	HG2_PB_pbsv_3357	GAATAAAATCCATGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGCGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAATAAAAAAA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_3367:HG3_PB_HySA_5183:HG4_PB_assemblyticsfalcon_17317:HG2_PB_assemblyticsPBcR_17123:HG2_PB_assemblyticsfalcon_17723:HG4_Ill_Krunchall_4866:HG3_Ill_Krunchall_4637:HG2_Ill_Krunchall_4664:HG4_PB_HySA_5022:HG4_Ill_MetaSV_3386:HG3_Ill_MetaSV_3410:HG2_PB_HySA_6345:HG2_Ill_tnscope_345:HG2_Ill_MetaSV_3245:HG4_Ill_GATKHCSBGrefine_2324:HG4_10X_allpass_602:HG3_Ill_scalpel_3385:HG3_Ill_manta_750:HG3_Ill_GATKHCSBGrefine_2232:HG3_10X_allpass_639:HG2_PB_pbsv_3357:HG2_Ill_scalpel_3261:HG2_Ill_manta_941:HG2_Ill_GATKHCSBGrefine_2241:HG2_10X_allpass_514:HG3_PB_pbsv_3301:HG2_Ill_breakscan11_458:HG3_PB_assemblyticsfalcon_17625:HG4_PB_SVrefine2PBcRDovetail_1751:HG4_PB_SVrefine2Falcon1Dovetail_2028:HG3_PB_SVrefine2Falcon1Dovetail_2091:HG3_Ill_SVrefine2DISCOVARDovetail_2505:HG2_PB_SVrefine2PBcRplusDovetail_7428:HG2_PB_SVrefine2PB10Xhap12_2464:HG2_PB_SVrefine2Falcon2Bionano_1536:HG2_PB_SVrefine2Falcon1plusDovetail_8031:HG2_Ill_SVrefine2DISCOVARplusDovetail_8581:HG2_10X_SVrefine210Xhap12_2517;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_514:HG2_Ill_GATKHCSBGrefine_2241:HG2_Ill_manta_941:HG2_Ill_scalpel_3261:HG2_PB_pbsv_3357:HG3_10X_allpass_639:HG3_Ill_GATKHCSBGrefine_2232:HG3_Ill_manta_750:HG3_Ill_scalpel_3385:HG4_10X_allpass_602:HG4_Ill_GATKHCSBGrefine_2324;NumExactMatchSVs=11;ClusterMaxShiftDist=0.101576;ClusterMaxSizeDiff=0.101576;ClusterMaxEditDist=0.101576;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-291;DistBack=4251;DistForward=-281;DistMin=-281;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=3:68890201-68890506;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:84:./.:0:1:0:3:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr3	69416652	HG4_Ill_Krunchall_4871	GTTTTTGTTTTTACCCAAAAAATATATCATTGACAATTATCTGGGCCAATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2518:HG4_PB_assemblyticsfalcon_17321:HG4_PB_HySA_5024:HG4_PB_SVrefine2PBcRDovetail_1752:HG4_Ill_svaba_4273:HG4_Ill_SVrefine2DISCOVARDovetail_2520:HG4_Ill_Krunchall_4871:HG4_Ill_GATKHC_5563:HG4_Ill_GATKHCSBGrefine_2325:HG4_Ill_250bpfermikitraw_4648:HG4_Ill_150bpfermikitraw_4429:HG3_PB_SVrefine2Falcon1Dovetail_2092:HG3_PB_HySA_5187:HG3_Ill_svaba_4296:HG3_Ill_SVrefine2DISCOVARDovetail_2507:HG3_Ill_Krunchall_4641:HG3_Ill_GATKHC_5587:HG3_Ill_GATKHCSBGrefine_2233:HG3_Ill_250bpfermikitraw_4516:HG3_Ill_150bpfermikitraw_4369:HG2_PB_SVrefine2PBcRplusDovetail_7429:HG2_PB_SVrefine2PB10Xhap12_2465:HG2_PB_SVrefine2Falcon2Bionano_1537:HG2_PB_SVrefine2Falcon1plusDovetail_8032:HG2_PB_HySA_6352:HG2_Ill_svaba_4188:HG2_Ill_SVrefine2DISCOVARplusDovetail_8584:HG2_Ill_Krunchall_4669:HG2_Ill_GATKHC_5496:HG2_Ill_GATKHCSBGrefine_2242:HG2_Ill_250bpfermikitraw_4603:HG2_Ill_150bpfermikitraw_4261;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2518:HG4_PB_SVrefine2PBcRDovetail_1752:HG4_Ill_svaba_4273:HG4_Ill_SVrefine2DISCOVARDovetail_2520:HG4_Ill_Krunchall_4871:HG4_Ill_GATKHC_5563:HG4_Ill_GATKHCSBGrefine_2325:HG4_Ill_250bpfermikitraw_4648:HG4_Ill_150bpfermikitraw_4429:HG3_PB_SVrefine2Falcon1Dovetail_2092:HG3_PB_HySA_5187:HG3_Ill_svaba_4296:HG3_Ill_SVrefine2DISCOVARDovetail_2507:HG3_Ill_Krunchall_4641:HG3_Ill_GATKHC_5587:HG3_Ill_GATKHCSBGrefine_2233:HG3_Ill_250bpfermikitraw_4516:HG3_Ill_150bpfermikitraw_4369:HG2_PB_SVrefine2PBcRplusDovetail_7429:HG2_PB_SVrefine2PB10Xhap12_2465:HG2_PB_SVrefine2Falcon2Bionano_1537:HG2_PB_SVrefine2Falcon1plusDovetail_8032:HG2_PB_HySA_6352:HG2_Ill_svaba_4188:HG2_Ill_SVrefine2DISCOVARplusDovetail_8584:HG2_Ill_Krunchall_4669:HG2_Ill_GATKHC_5496:HG2_Ill_GATKHCSBGrefine_2242:HG2_Ill_250bpfermikitraw_4603:HG2_Ill_150bpfermikitraw_4261;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0196078;PBcalls=10;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=37160;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=99;REFWIDENED=3:69416653-69416801;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2529.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:79:1/1:1:27:0:37:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr3	70415105	HG4_Ill_manta_808	TTGTGCTTTACCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3247:HG3_PB_HySA_5192:HG4_PB_assemblyticsfalcon_17330:HG3_PB_assemblyticsfalcon_17637:HG2_PB_assemblyticsfalcon_17735:HG2_PB_assemblyticsPBcR_17137:HG3_Ill_Krunchall_4648:HG3_PB_pbsv_3305:HG2_PB_pbsv_3362:HG4_PB_pbsv_3372:HG4_PB_SVrefine2PBcRDovetail_1756:HG4_PB_SVrefine2Falcon1Dovetail_2031:HG4_Ill_scalpel_3177:HG4_Ill_manta_808:HG4_Ill_SVrefine2DISCOVARDovetail_2527:HG4_Ill_GATKHCSBGrefine_2330:HG4_10X_allpass_604:HG3_PB_SVrefine2Falcon1Dovetail_2095:HG3_Ill_scalpel_3390:HG3_Ill_manta_752:HG3_Ill_GATKHCSBGrefine_2237:HG3_10X_allpass_641:HG2_PB_SVrefine2PBcRplusDovetail_7432:HG2_PB_SVrefine2PB10Xhap12_2468:HG2_PB_SVrefine2Falcon2Bionano_1542:HG2_PB_SVrefine2Falcon1plusDovetail_8035:HG2_PB_HySA_6360:HG2_Ill_scalpel_3267:HG2_Ill_manta_943:HG2_Ill_breakscan11_460:HG2_Ill_SpiralSDKrefine_11119:HG2_Ill_SVrefine2DISCOVARplusDovetail_8590:HG2_Ill_GATKHCSBGrefine_2247:HG2_10X_allpass_516:HG4_Ill_MetaSV_3388:HG3_Ill_MetaSV_3414:HG2_Ill_tnscope_347:HG2_Ill_Spiral_234;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_516:HG2_Ill_GATKHCSBGrefine_2247:HG2_Ill_SVrefine2DISCOVARplusDovetail_8590:HG2_Ill_SpiralSDKrefine_11119:HG2_Ill_breakscan11_460:HG2_Ill_manta_943:HG2_Ill_scalpel_3267:HG2_PB_HySA_6360:HG2_PB_SVrefine2Falcon1plusDovetail_8035:HG2_PB_SVrefine2Falcon2Bionano_1542:HG2_PB_SVrefine2PB10Xhap12_2468:HG2_PB_SVrefine2PBcRplusDovetail_7432:HG3_10X_allpass_641:HG3_Ill_GATKHCSBGrefine_2237:HG3_Ill_manta_752:HG3_Ill_scalpel_3390:HG3_PB_SVrefine2Falcon1Dovetail_2095:HG4_10X_allpass_604:HG4_Ill_GATKHCSBGrefine_2330:HG4_Ill_SVrefine2DISCOVARDovetail_2527:HG4_Ill_manta_808:HG4_Ill_scalpel_3177:HG4_PB_SVrefine2Falcon1Dovetail_2031:HG4_PB_SVrefine2PBcRDovetail_1756:HG4_PB_pbsv_3372;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0943683;ClusterMaxSizeDiff=0.0943683;ClusterMaxEditDist=0.0943683;PBcalls=16;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=-336;DistForward=-318;DistMin=-336;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:70415106-70415456;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:65:1/1:1:28:2:21:./.:0:0:0:0:1/1:0:32:./.:2:6:.:.:.
chr3	70943316	HG2_PB_SVrefine2Falcon2Bionano_1543	TGGCCTGTGGGCACTACAATAGTAAAGCTCCAGGGAATATGAGGGGGGTGGGTACCAATAGCATTGCTACAACATTGTTCAGAAAATGTTATATATAAAGTTTCGGTGCCACAAAAGAAAGAGCACTCGAATATAAAATTTTCTTTTTAATTCTCAGCAAGGCAAGTTACTTCTATATAGAAAGTTGCGCCCTTACAGATGAAACAATGGTGAGTGCACACTTGGACAAGGGAGGGGAAGGGGTTCTTATCCCTGACGCACGTGGCCCCTAATGTGTCCTTCCCCTATTGGCTAGGGTTAGACCACACAGGCTAAACTAATTCCGATTGGCTAA	GGT	20	PASS	ClusterIDs=HG2_10X_allpass_517:HG3_Ill_GATKHCSBGrefine_2239:HG2_Ill_GATKHCSBGrefine_2249:HG4_PB_assemblyticsfalcon_17333:HG4_PB_SVrefine2Falcon1Dovetail_2032:HG3_PB_assemblyticsfalcon_17639:HG3_PB_SVrefine2Falcon1Dovetail_2096:HG2_PB_assemblyticsfalcon_17737:HG2_PB_SVrefine2Falcon2Bionano_1543:HG2_PB_SVrefine2Falcon1plusDovetail_8036:HG3_Ill_Krunchall_4653:HG2_PB_pbsv_3363:HG3_PB_pbsv_3306:HG3_10X_allpass_642;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8036:HG2_PB_SVrefine2Falcon2Bionano_1543:HG2_PB_assemblyticsfalcon_17737;NumExactMatchSVs=3;ClusterMaxShiftDist=0.175439;ClusterMaxSizeDiff=0.175439;ClusterMaxEditDist=0.175439;PBcalls=9;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=-331;DistBack=-553;DistForward=-332;DistMin=-553;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:70943316-70943649;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.997;PctRecOverlap=0.991;SizeDiff=1;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2531.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:23:0|1:30:1:1:18:./.:0:0:0:0:0/1:47:23:0/1:36:5:.:.:.
chr3	71242337	HG2_Ill_GATKHCSBGrefine_2250	TGCCCAGGCTGGAGTGCAGTGGTGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTACCTCAGCCTCCAGAGTAGCTGGGACTGCAGGCGCCCACCACCACACCCGGCTAATTTTTTGTATTTTTTAGTAGAGGCGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCTGCCCTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCCGTTATTTGTTTTTTTTTTTTAGACATATTCTCACTTTGTC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8594:HG3_PB_HySA_5199:HG2_PB_pbsv_3364:HG3_PB_pbsv_3307:HG3_Ill_MetaSV_3417:HG3_Ill_scalpel_3392:HG3_Ill_manta_753:HG3_Ill_GATKHCSBGrefine_2240:HG3_10X_allpass_643:HG2_Ill_manta_944:HG2_Ill_SpiralSDKrefine_11121:HG2_Ill_GATKHCSBGrefine_2250:HG2_10X_allpass_518:HG2_Ill_tnscope_348:HG4_PB_SVrefine2Falcon1Dovetail_2033:HG3_PB_SVrefine2Falcon1Dovetail_2097:HG3_Ill_SVrefine2DISCOVARDovetail_2513;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_518:HG2_Ill_GATKHCSBGrefine_2250:HG2_Ill_SpiralSDKrefine_11121:HG2_Ill_manta_944:HG3_10X_allpass_643:HG3_Ill_GATKHCSBGrefine_2240:HG3_Ill_manta_753:HG3_Ill_scalpel_3392;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00662252;ClusterMaxSizeDiff=0.00662252;ClusterMaxEditDist=0.0331126;PBcalls=5;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-301;DistBack=-2;DistForward=-280;DistMin=-280;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=290;REFWIDENED=3:71242298-71242888;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2532.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:21:0|1:39:0:0:19:./.:0:0:0:0:0/1:34:24:0/1:33:7:.:.:.
chr3	74765412	HG4_Ill_manta_813	TTAAAGTTATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3254:HG2_10X_allpass_519:HG3_Ill_Krunchall_4675:HG2_PB_assemblyticsPBcR_17166:HG4_PB_assemblyticsfalcon_17358:HG3_PB_assemblyticsfalcon_17667:HG2_PB_assemblyticsfalcon_17766:HG4_PB_pbsv_3388:HG2_PB_pbsv_3381:HG2_PB_HySA_6400:HG4_PB_SVrefine2PBcRDovetail_1769:HG4_PB_SVrefine2Falcon1Dovetail_2044:HG4_Ill_scalpel_3194:HG4_Ill_manta_813:HG4_Ill_SVrefine2DISCOVARDovetail_2554:HG4_Ill_GATKHCSBGrefine_2341:HG4_10X_allpass_606:HG3_PB_pbsv_3322:HG3_PB_HySA_5221:HG3_Ill_scalpel_3410:HG3_Ill_manta_755:HG3_Ill_SVrefine2DISCOVARDovetail_2532:HG3_Ill_GATKHCSBGrefine_2253:HG3_10X_allpass_645:HG2_PB_SVrefine2PBcRplusDovetail_7441:HG2_PB_SVrefine2PB10Xhap12_2482:HG2_PB_SVrefine2Falcon2Bionano_1555:HG2_PB_SVrefine2Falcon1plusDovetail_8048:HG2_Ill_scalpel_3283:HG2_Ill_manta_948:HG2_Ill_SVrefine2DISCOVARplusDovetail_8604:HG2_Ill_GATKHCSBGrefine_2264:HG2_Ill_breakscan11_461:HG4_Ill_Spiral_272:HG4_Ill_MetaSV_3396:HG3_Ill_MetaSV_3424:HG2_Ill_tnscope_349:HG2_Ill_Spiral_235;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2264:HG2_Ill_SVrefine2DISCOVARplusDovetail_8604:HG2_Ill_manta_948:HG2_Ill_scalpel_3283:HG2_PB_SVrefine2Falcon1plusDovetail_8048:HG2_PB_SVrefine2Falcon2Bionano_1555:HG2_PB_SVrefine2PB10Xhap12_2482:HG2_PB_SVrefine2PBcRplusDovetail_7441:HG3_10X_allpass_645:HG3_Ill_GATKHCSBGrefine_2253:HG3_Ill_SVrefine2DISCOVARDovetail_2532:HG3_Ill_manta_755:HG3_Ill_scalpel_3410:HG3_PB_HySA_5221:HG3_PB_pbsv_3322:HG4_10X_allpass_606:HG4_Ill_GATKHCSBGrefine_2341:HG4_Ill_SVrefine2DISCOVARDovetail_2554:HG4_Ill_manta_813:HG4_Ill_scalpel_3194:HG4_PB_SVrefine2Falcon1Dovetail_2044:HG4_PB_SVrefine2PBcRDovetail_1769;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0850394;ClusterMaxSizeDiff=0.0850394;ClusterMaxEditDist=0.0850394;PBcalls=15;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=43569;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=3:74765413-74765749;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2533.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:./.:0:2:0:0:./.:0:0:0:0:1/1:0:36:./.:1:9:.:.:.
chr3	74789871	HG2_Ill_manta_949	GTAGAATGCTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_462:HG4_Ill_Spiral_273:HG3_Ill_Spiral_3658:HG2_PB_HySA_6401:HG2_PB_pbsv_3382:HG4_PB_pbsv_3389:HG4_PB_SVrefine2PBcRDovetail_1770:HG4_PB_SVrefine2Falcon1Dovetail_2045:HG4_Ill_svaba_4303:HG4_Ill_scalpel_3195:HG4_Ill_manta_814:HG4_Ill_SVrefine2DISCOVARDovetail_2555:HG4_Ill_Krunchall_4901:HG4_Ill_GATKHC_5600:HG4_Ill_GATKHCSBGrefine_2342:HG4_Ill_250bpfermikitraw_4680:HG4_Ill_150bpfermikitraw_4459:HG4_CG_vcfBeta_2260:HG4_10X_allpass_607:HG3_Ill_svaba_4324:HG3_Ill_scalpel_3411:HG3_Ill_SVrefine2DISCOVARDovetail_2533:HG3_Ill_Krunchall_4677:HG3_Ill_GATKHC_5622:HG3_Ill_GATKHCSBGrefine_2254:HG3_Ill_250bpfermikitraw_4548:HG3_Ill_150bpfermikitraw_4399:HG3_CG_vcfBeta_1954:HG3_10X_allpass_646:HG2_PB_SVrefine2PBcRplusDovetail_7442:HG2_PB_SVrefine2PB10Xhap12_2483:HG2_PB_SVrefine2Falcon2Bionano_1556:HG2_PB_SVrefine2Falcon1plusDovetail_8049:HG2_Ill_svaba_4215:HG2_Ill_manta_949:HG2_Ill_SpiralSDKrefine_11136:HG2_Ill_SVrefine2DISCOVARplusDovetail_8605:HG2_Ill_Krunchall_4701:HG2_Ill_GATKHC_5532:HG2_Ill_GATKHCSBGrefine_2265:HG2_Ill_250bpfermikitraw_4629:HG2_Ill_150bpfermikitraw_4293:HG2_CG_vcfBeta_2036:HG2_10X_allpass_520:HG3_PB_pbsv_3323;NumClusterSVs=45;ExactMatchIDs=HG2_10X_allpass_520:HG2_CG_vcfBeta_2036:HG2_Ill_150bpfermikitraw_4293:HG2_Ill_250bpfermikitraw_4629:HG2_Ill_GATKHCSBGrefine_2265:HG2_Ill_GATKHC_5532:HG2_Ill_Krunchall_4701:HG2_Ill_SVrefine2DISCOVARplusDovetail_8605:HG2_Ill_SpiralSDKrefine_11136:HG2_Ill_manta_949:HG2_Ill_svaba_4215:HG2_PB_SVrefine2Falcon1plusDovetail_8049:HG2_PB_SVrefine2Falcon2Bionano_1556:HG2_PB_SVrefine2PB10Xhap12_2483:HG2_PB_SVrefine2PBcRplusDovetail_7442:HG3_10X_allpass_646:HG3_CG_vcfBeta_1954:HG3_Ill_150bpfermikitraw_4399:HG3_Ill_250bpfermikitraw_4548:HG3_Ill_GATKHCSBGrefine_2254:HG3_Ill_GATKHC_5622:HG3_Ill_Krunchall_4677:HG3_Ill_SVrefine2DISCOVARDovetail_2533:HG3_Ill_scalpel_3411:HG3_Ill_svaba_4324:HG4_10X_allpass_607:HG4_CG_vcfBeta_2260:HG4_Ill_150bpfermikitraw_4459:HG4_Ill_250bpfermikitraw_4680:HG4_Ill_GATKHCSBGrefine_2342:HG4_Ill_GATKHC_5600:HG4_Ill_Krunchall_4901:HG4_Ill_SVrefine2DISCOVARDovetail_2555:HG4_Ill_manta_814:HG4_Ill_scalpel_3195:HG4_Ill_svaba_4303:HG4_PB_SVrefine2Falcon1Dovetail_2045:HG4_PB_SVrefine2PBcRDovetail_1770;NumExactMatchSVs=38;ClusterMaxShiftDist=0.0263158;ClusterMaxSizeDiff=0.0263158;ClusterMaxEditDist=0.0266667;PBcalls=10;Illcalls=29;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=26;TenXexactcalls=3;CGexactcalls=3;HG2count=18;HG3count=12;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-75;DistBack=2785;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=3:74789872-74789960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2534.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:62:./.:5:6:4:41:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr3	76488391	HG2_PB_HySA_6423	TGGAGTTTAGAACTAGTGGGAAAACAGAAACAAATGTAAAATGGGATTCTGCTGAAGGTTACAAAGAAGAGGTACGAAGAGCTGAATCAGGAAGATCAGAGAAGGTGCCCTTAAGAAATTTA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2531:HG3_PB_pbsv_3334:HG2_PB_pbsv_3397:HG3_PB_HySA_5240:HG3_Ill_svaba_4339:HG2_PB_SVrefine2PBcRplusDovetail_7450:HG2_PB_SVrefine2PB10Xhap12_2495:HG2_PB_HySA_6423:HG2_Ill_svaba_4231:HG2_Ill_SpiralSDKrefine_11158;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2531:HG3_Ill_svaba_4339:HG2_PB_SVrefine2PBcRplusDovetail_7450:HG2_PB_SVrefine2PB10Xhap12_2495:HG2_PB_HySA_6423:HG2_Ill_svaba_4231:HG2_Ill_SpiralSDKrefine_11158;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0163934;ClusterMaxSizeDiff=0.0163934;ClusterMaxEditDist=0.0165289;PBcalls=6;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-121;DistBack=3060;DistForward=-80;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=120;REFWIDENED=3:76488392-76488632;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:41:./.:12:36:16:1:./.:0:0:0:0:0/1:42:9:./.:.:.:.:.:.
chr3	79809899	HG4_10X_allpass_613	TAAGAGATTATACAGTTTGTCTTAAAAAATGGTCTTTAATTCTGGCTAAACATAATTACAAATTATGTAA	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_17408:HG2_PB_HySA_6469:HG4_Ill_GATKHC_5662:HG4_Ill_GATKHCSBGrefine_2364:HG3_Ill_GATKHC_5691:HG3_Ill_GATKHCSBGrefine_2271:HG2_Ill_GATKHC_5596:HG2_Ill_GATKHCSBGrefine_2284:HG3_PB_HySA_5274:HG4_Ill_manta_820:HG3_Ill_manta_762:HG3_CG_vcfBeta_1974:HG2_Ill_manta_961:HG2_Ill_SpiralSDKrefine_11176:HG2_Ill_breakscan11_466:HG4_Ill_Spiral_276:HG3_Ill_Spiral_3699:HG2_Ill_Spiral_236:HG4_Ill_svaba_4342:HG4_Ill_Krunchall_4947:HG4_Ill_250bpfermikitraw_4732:HG4_Ill_150bpfermikitraw_4502:HG4_10X_allpass_613:HG3_Ill_svaba_4369:HG3_Ill_scalpel_3448:HG3_Ill_Krunchall_4723:HG3_Ill_250bpfermikitraw_4602:HG3_Ill_150bpfermikitraw_4447:HG3_10X_allpass_653:HG2_Ill_svaba_4256:HG2_Ill_scalpel_3318:HG2_Ill_Krunchall_4749:HG2_Ill_250bpfermikitraw_4674:HG2_Ill_150bpfermikitraw_4336:HG2_10X_allpass_523:HG3_PB_pbsv_3361:HG2_PB_pbsv_3421:HG3_PB_assemblyticsfalcon_17719:HG4_PB_pbsv_3425;NumClusterSVs=39;ExactMatchIDs=HG2_10X_allpass_523:HG2_Ill_150bpfermikitraw_4336:HG2_Ill_250bpfermikitraw_4674:HG2_Ill_Krunchall_4749:HG2_Ill_scalpel_3318:HG2_Ill_svaba_4256:HG3_10X_allpass_653:HG3_Ill_150bpfermikitraw_4447:HG3_Ill_250bpfermikitraw_4602:HG3_Ill_Krunchall_4723:HG3_Ill_scalpel_3448:HG3_Ill_svaba_4369:HG4_10X_allpass_613:HG4_Ill_150bpfermikitraw_4502:HG4_Ill_250bpfermikitraw_4732:HG4_Ill_Krunchall_4947:HG4_Ill_svaba_4342;NumExactMatchSVs=17;ClusterMaxShiftDist=0.103704;ClusterMaxSizeDiff=0.103704;ClusterMaxEditDist=0.120301;PBcalls=7;Illcalls=28;TenXcalls=3;CGcalls=1;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=14;HG4count=11;NumTechs=4;NumTechsExact=2;SVLEN=-69;DistBack=512;DistForward=-69;DistMin=-69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:79809898-79809969;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9857;PctRecOverlap=0.9718;SizeDiff=-1;StartDistance=2;EndDistance=1;GTMatch=0;TruScore=98;MatchId=2536.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:44:1|0:5:41:25:1:./.:0:0:0:0:0/1:44:16:./.:.:.:.:.:.
chr3	80925311	HG2_PB_SVrefine2Falcon2Bionano_1571	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCATTGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGC	T	20	PASS	ClusterIDs=HG3_Ill_Krunchall_4736:HG4_PB_assemblyticsfalcon_17420:HG2_PB_assemblyticsfalcon_17825:HG3_PB_assemblyticsfalcon_17731:HG2_PB_assemblyticsPBcR_17222:HG4_Ill_Krunchall_4958:HG3_PB_pbsv_3367:HG2_Ill_Krunchall_4760:HG4_PB_SVrefine2PBcRDovetail_1782:HG4_PB_SVrefine2Falcon1Dovetail_2065:HG4_Ill_SVrefine2DISCOVARDovetail_2578:HG4_Ill_MetaSV_3405:HG4_Ill_GATKHCSBGrefine_2369:HG4_10X_allpass_615:HG3_PB_SVrefine2Falcon1Dovetail_2128:HG3_Ill_SVrefine2DISCOVARDovetail_2566:HG3_Ill_MetaSV_3437:HG3_Ill_GATKHCSBGrefine_2299:HG3_10X_allpass_654:HG2_PB_SVrefine2PBcRplusDovetail_7461:HG2_PB_SVrefine2PB10Xhap12_2507:HG2_PB_SVrefine2Falcon2Bionano_1571:HG2_PB_SVrefine2Falcon1plusDovetail_8065:HG2_Ill_SVrefine2DISCOVARplusDovetail_8632:HG2_Ill_MetaSV_3263:HG2_Ill_GATKHCSBGrefine_2287:HG2_10X_allpass_524:HG2_10X_SVrefine210Xhap12_2545:HG2_Ill_tnscope_352:HG4_PB_pbsv_3431:HG2_Ill_breakscan11_467:HG2_PB_pbsv_3427:HG4_Ill_Krunchall_4957:HG3_Ill_Krunchall_4737:HG2_Ill_Krunchall_4759;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2545:HG2_10X_allpass_524:HG2_Ill_GATKHCSBGrefine_2287:HG2_Ill_MetaSV_3263:HG2_Ill_SVrefine2DISCOVARplusDovetail_8632:HG2_PB_SVrefine2Falcon1plusDovetail_8065:HG2_PB_SVrefine2Falcon2Bionano_1571:HG2_PB_SVrefine2PB10Xhap12_2507:HG2_PB_SVrefine2PBcRplusDovetail_7461:HG3_10X_allpass_654:HG3_Ill_GATKHCSBGrefine_2299:HG3_Ill_MetaSV_3437:HG3_Ill_SVrefine2DISCOVARDovetail_2566:HG3_PB_SVrefine2Falcon1Dovetail_2128:HG4_10X_allpass_615:HG4_Ill_GATKHCSBGrefine_2369:HG4_Ill_MetaSV_3405:HG4_Ill_SVrefine2DISCOVARDovetail_2578:HG4_PB_SVrefine2Falcon1Dovetail_2065:HG4_PB_SVrefine2PBcRDovetail_1782;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0170147;ClusterMaxSizeDiff=0.00464037;ClusterMaxEditDist=0.0857474;PBcalls=14;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-1293;DistBack=105581;DistForward=2415;DistMin=2415;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:80925312-80926607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2537.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:75:1/1:0:30:0:25:./.:0:0:0:0:1/1:0:23:1/1:3:77:1422:.:.
chr3	81346065	HG4_Ill_GATKHCSBGrefine_2373	TAAAAATGAGTACCTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCATAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGGACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_468:HG2_PB_assemblyticsfalcon_17830:HG3_PB_assemblyticsfalcon_17737:HG4_PB_pbsv_3435:HG4_Ill_Krunchall_4963:HG3_Ill_Krunchall_4743:HG2_Ill_Krunchall_4765:HG2_PB_pbsv_3431:HG3_PB_pbsv_3371:HG2_PB_HySA_6491:HG2_Ill_tnscope_353:HG2_Ill_MetaSV_3265:HG4_PB_SVrefine2PBcRDovetail_1784:HG4_Ill_SVrefine2DISCOVARDovetail_2583:HG4_Ill_MetaSV_3408:HG4_Ill_GATKHCSBGrefine_2373:HG4_10X_allpass_616:HG3_PB_SVrefine2Falcon1Dovetail_2130:HG3_Ill_manta_765:HG3_Ill_SVrefine2DISCOVARDovetail_2570:HG3_Ill_MetaSV_3439:HG3_Ill_GATKHCSBGrefine_2303:HG3_10X_allpass_655:HG2_PB_SVrefine2PBcRplusDovetail_7464:HG2_PB_SVrefine2PB10Xhap12_2508:HG2_PB_SVrefine2Falcon2Bionano_1574:HG2_PB_SVrefine2Falcon1plusDovetail_8066:HG2_Ill_scalpel_3333:HG2_Ill_manta_965:HG2_Ill_SVrefine2DISCOVARplusDovetail_8636:HG2_Ill_GATKHCSBGrefine_2291:HG2_10X_SVrefine210Xhap12_2547;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2547:HG2_Ill_GATKHCSBGrefine_2291:HG2_Ill_SVrefine2DISCOVARplusDovetail_8636:HG2_Ill_manta_965:HG2_Ill_scalpel_3333:HG2_PB_SVrefine2Falcon1plusDovetail_8066:HG2_PB_SVrefine2Falcon2Bionano_1574:HG2_PB_SVrefine2PB10Xhap12_2508:HG2_PB_SVrefine2PBcRplusDovetail_7464:HG3_10X_allpass_655:HG3_Ill_GATKHCSBGrefine_2303:HG3_Ill_MetaSV_3439:HG3_Ill_SVrefine2DISCOVARDovetail_2570:HG3_Ill_manta_765:HG3_PB_SVrefine2Falcon1Dovetail_2130:HG4_10X_allpass_616:HG4_Ill_GATKHCSBGrefine_2373:HG4_Ill_MetaSV_3408:HG4_Ill_SVrefine2DISCOVARDovetail_2583:HG4_PB_SVrefine2PBcRDovetail_1784;NumExactMatchSVs=20;ClusterMaxShiftDist=0.157377;ClusterMaxSizeDiff=0.157377;ClusterMaxEditDist=0.157377;PBcalls=12;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=4667;DistForward=-299;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=25;REFWIDENED=3:81346066-81346405;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2538.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:15:62:./.:12:32:0:21:./.:0:0:0:0:1/1:0:42:1/1:1:10:.:.:.
chr3	81907492	HG4_10X_allpass_617	TAAAAACTGGTAAACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_6492:HG2_10X_allpass_525:HG4_Ill_Krunchall_4968:HG3_Ill_Krunchall_4744:HG2_Ill_Krunchall_4770:HG4_PB_assemblyticsfalcon_17429:HG2_PB_assemblyticsfalcon_17833:HG3_PB_assemblyticsfalcon_17738:HG2_PB_assemblyticsPBcR_17228:HG4_Ill_Spiral_277:HG3_PB_HySA_5291:HG3_PB_pbsv_3372:HG4_Ill_MetaSV_3409:HG3_Ill_MetaSV_3440:HG2_Ill_tnscope_354:HG2_Ill_MetaSV_3266:HG4_PB_SVrefine2PBcRDovetail_1785:HG4_PB_SVrefine2Falcon1Dovetail_2068:HG4_Ill_scalpel_3239:HG4_Ill_manta_823:HG4_Ill_SVrefine2DISCOVARDovetail_2586:HG4_Ill_GATKHCSBGrefine_2377:HG4_10X_allpass_617:HG3_PB_SVrefine2Falcon1Dovetail_2131:HG3_Ill_scalpel_3463:HG3_Ill_manta_766:HG3_Ill_SVrefine2DISCOVARDovetail_2573:HG3_Ill_GATKHCSBGrefine_2304:HG3_10X_allpass_657:HG2_PB_pbsv_3433:HG2_PB_SVrefine2PBcRplusDovetail_7465:HG2_PB_SVrefine2PB10Xhap12_2509:HG2_PB_SVrefine2Falcon2Bionano_1575:HG2_PB_SVrefine2Falcon1plusDovetail_8068:HG2_Ill_scalpel_3336:HG2_Ill_manta_966:HG2_Ill_SVrefine2DISCOVARplusDovetail_8639:HG2_Ill_GATKHCSBGrefine_2294:HG2_10X_SVrefine210Xhap12_2548:HG4_PB_pbsv_3436:HG2_Ill_breakscan11_469:HG3_Ill_Spiral_3715:HG2_Ill_Spiral_237;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2548:HG2_Ill_GATKHCSBGrefine_2294:HG2_Ill_SVrefine2DISCOVARplusDovetail_8639:HG2_Ill_manta_966:HG2_Ill_scalpel_3336:HG2_PB_SVrefine2Falcon1plusDovetail_8068:HG2_PB_SVrefine2Falcon2Bionano_1575:HG2_PB_SVrefine2PB10Xhap12_2509:HG2_PB_SVrefine2PBcRplusDovetail_7465:HG2_PB_pbsv_3433:HG3_10X_allpass_657:HG3_Ill_GATKHCSBGrefine_2304:HG3_Ill_SVrefine2DISCOVARDovetail_2573:HG3_Ill_manta_766:HG3_Ill_scalpel_3463:HG3_PB_SVrefine2Falcon1Dovetail_2131:HG4_10X_allpass_617:HG4_Ill_GATKHCSBGrefine_2377:HG4_Ill_SVrefine2DISCOVARDovetail_2586:HG4_Ill_manta_823:HG4_Ill_scalpel_3239:HG4_PB_SVrefine2Falcon1Dovetail_2068:HG4_PB_SVrefine2PBcRDovetail_1785;NumExactMatchSVs=23;ClusterMaxShiftDist=0.101266;ClusterMaxSizeDiff=0.101266;ClusterMaxEditDist=0.101266;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=76855;DistForward=57943;DistMin=57943;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=3:81907493-81907827;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2539.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:98:1/1:1:38:0:27:./.:0:0:0:0:1/1:0:54:./.:2:12:.:.:.
chr3	82936656	HG2_Ill_manta_969	CTAGAACAAAAAACCAAACACCGCATATTCTCACGCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAAGAAAAAAAAATAAA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2514:HG4_Ill_Krunchall_4975:HG3_PB_pbsv_3378:HG3_Ill_Krunchall_4751:HG2_PB_pbsv_3441:HG2_Ill_Krunchall_4775:HG3_PB_HySA_5304:HG4_PB_assemblyticsfalcon_17436:HG3_PB_assemblyticsfalcon_17746:HG3_Ill_MetaSV_3442:HG2_Ill_tnscope_355:HG2_PB_PB10Xdip_21048:HG2_PB_SVrefine2PB10Xhap12_2515:HG2_PB_PB10Xdip_21047:HG4_PB_SVrefine2Falcon1Dovetail_2074:HG4_Ill_scalpel_3244:HG4_Ill_manta_825:HG4_Ill_SVrefine2DISCOVARDovetail_2588:HG4_Ill_GATKHCSBGrefine_2385:HG4_10X_allpass_619:HG3_PB_SVrefine2Falcon1Dovetail_2135:HG3_Ill_scalpel_3468:HG3_Ill_SVrefine2DISCOVARDovetail_2576:HG3_Ill_GATKHCSBGrefine_2310:HG3_10X_allpass_659:HG2_PB_SVrefine2Falcon2Bionano_1579:HG2_Ill_scalpel_3341:HG2_Ill_manta_969:HG2_Ill_SVrefine2DISCOVARplusDovetail_8640:HG2_Ill_GATKHCSBGrefine_2302:HG2_10X_allpass_526:HG2_10X_SVrefine210Xhap12_2551:HG4_PB_pbsv_3443:HG2_Ill_breakscan11_470;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2551:HG2_10X_allpass_526:HG2_Ill_GATKHCSBGrefine_2302:HG2_Ill_SVrefine2DISCOVARplusDovetail_8640:HG2_Ill_manta_969:HG2_Ill_scalpel_3341:HG2_PB_SVrefine2Falcon2Bionano_1579:HG3_10X_allpass_659:HG3_Ill_GATKHCSBGrefine_2310:HG3_Ill_SVrefine2DISCOVARDovetail_2576:HG3_Ill_scalpel_3468:HG3_PB_SVrefine2Falcon1Dovetail_2135:HG4_10X_allpass_619:HG4_Ill_GATKHCSBGrefine_2385:HG4_Ill_SVrefine2DISCOVARDovetail_2588:HG4_Ill_manta_825:HG4_Ill_scalpel_3244:HG4_PB_SVrefine2Falcon1Dovetail_2074;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0163934;ClusterMaxSizeDiff=0.0163934;ClusterMaxEditDist=0.0163934;PBcalls=13;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-301;DistBack=-252;DistForward=-277;DistMin=-277;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=3:82936657-82936959;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2540.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:29:./.:12:19:9:6:./.:0:0:0:0:0/1:27:21:0/1:26:5:.:.:.
chr3	83544859	HG3_Ill_250bpfermikitraw_4628	TATCTACATATCTACGTATCTATGTATATCTACATATCTACGTACATATGTAG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_4371:HG3_PB_HySA_5321:HG2_PB_HySA_6511:HG4_Ill_GATKHC_5703:HG4_Ill_GATKHCSBGrefine_2391:HG3_Ill_GATKHC_5732:HG3_Ill_GATKHCSBGrefine_2317:HG2_Ill_GATKHC_5639:HG2_Ill_GATKHCSBGrefine_2308:HG3_Ill_manta_770:HG2_Ill_manta_973:HG3_PB_assemblyticsfalcon_17754:HG2_PB_assemblyticsPBcR_17242:HG4_PB_assemblyticsfalcon_17444:HG3_PB_pbsv_3383:HG2_PB_pbsv_3448:HG4_PB_pbsv_3451:HG4_PB_HySA_5136:HG4_Ill_svaba_4371:HG4_Ill_scalpel_3247:HG4_Ill_manta_827:HG4_Ill_Krunchall_4986:HG4_Ill_GATKHCSBGrefine_2390:HG4_Ill_250bpfermikitraw_4771:HG4_Ill_150bpfermikitraw_4538:HG3_Ill_svaba_4395:HG3_Ill_scalpel_3473:HG3_Ill_Krunchall_4759:HG3_Ill_GATKHCSBGrefine_2316:HG3_Ill_250bpfermikitraw_4628:HG3_Ill_150bpfermikitraw_4478:HG2_PB_assemblyticsfalcon_17851:HG2_Ill_svaba_4284:HG2_Ill_scalpel_3347:HG2_Ill_SpiralSDKrefine_11205:HG2_Ill_Krunchall_4785:HG2_Ill_GATKHCSBGrefine_2307:HG2_Ill_250bpfermikitraw_4706;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4371:HG4_Ill_svaba_4371:HG4_Ill_scalpel_3247:HG4_Ill_manta_827:HG4_Ill_Krunchall_4986:HG4_Ill_GATKHCSBGrefine_2390:HG4_Ill_250bpfermikitraw_4771:HG4_Ill_150bpfermikitraw_4538:HG3_Ill_svaba_4395:HG3_Ill_scalpel_3473:HG3_Ill_Krunchall_4759:HG3_Ill_GATKHCSBGrefine_2316:HG3_Ill_250bpfermikitraw_4628:HG3_Ill_150bpfermikitraw_4478:HG2_PB_assemblyticsfalcon_17851:HG2_Ill_svaba_4284:HG2_Ill_scalpel_3347:HG2_Ill_SpiralSDKrefine_11205:HG2_Ill_Krunchall_4785:HG2_Ill_GATKHCSBGrefine_2307:HG2_Ill_250bpfermikitraw_4706;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0582524;PBcalls=10;Illcalls=28;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=25361;DistForward=11013;DistMin=11013;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=62;REFWIDENED=3:83544858-83544974;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:11:50:1/1:2:15:4:17:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr3	83853115	HG4_PB_SVrefine2Falcon1Dovetail_2080	TTATATGGCCTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATACCATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCACAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGGGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAAATGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTCTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGGTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCACAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_357:HG4_PB_assemblyticsfalcon_17450:HG3_PB_assemblyticsfalcon_17760:HG2_PB_assemblyticsfalcon_17857:HG3_10X_allpass_662:HG2_PB_assemblyticsPBcR_17249:HG2_10X_allpass_529:HG4_10X_allpass_622:HG3_Ill_Krunchall_4765:HG4_PB_pbsv_3453:HG4_PB_SVrefine2PBcRDovetail_1791:HG4_PB_SVrefine2Falcon1Dovetail_2080:HG4_Ill_SVrefine2DISCOVARDovetail_2596:HG4_Ill_MetaSV_3415:HG4_Ill_GATKHCSBGrefine_2394:HG3_PB_pbsv_3385:HG3_PB_SVrefine2Falcon1Dovetail_2139:HG3_Ill_SVrefine2DISCOVARDovetail_2587:HG3_Ill_MetaSV_3446:HG3_Ill_GATKHCSBGrefine_2320:HG2_PB_pbsv_3450:HG2_PB_SVrefine2PBcRplusDovetail_7472:HG2_PB_SVrefine2PB10Xhap12_2520:HG2_PB_SVrefine2Falcon2Bionano_1584:HG2_PB_SVrefine2Falcon1plusDovetail_8077:HG2_Ill_SVrefine2DISCOVARplusDovetail_8645:HG2_Ill_MetaSV_3271:HG2_Ill_GATKHCSBGrefine_2311:HG2_10X_SVrefine210Xhap12_2556:HG2_Ill_breakscan11_471;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2556:HG2_Ill_GATKHCSBGrefine_2311:HG2_Ill_MetaSV_3271:HG2_Ill_SVrefine2DISCOVARplusDovetail_8645:HG2_PB_SVrefine2Falcon1plusDovetail_8077:HG2_PB_SVrefine2Falcon2Bionano_1584:HG2_PB_SVrefine2PB10Xhap12_2520:HG2_PB_SVrefine2PBcRplusDovetail_7472:HG2_PB_pbsv_3450:HG3_Ill_GATKHCSBGrefine_2320:HG3_Ill_MetaSV_3446:HG3_Ill_SVrefine2DISCOVARDovetail_2587:HG3_PB_SVrefine2Falcon1Dovetail_2139:HG3_PB_pbsv_3385:HG4_Ill_GATKHCSBGrefine_2394:HG4_Ill_MetaSV_3415:HG4_Ill_SVrefine2DISCOVARDovetail_2596:HG4_PB_SVrefine2Falcon1Dovetail_2080:HG4_PB_SVrefine2PBcRDovetail_1791;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0112183;ClusterMaxSizeDiff=0.0112183;ClusterMaxEditDist=0.0112183;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2234;DistBack=24820;DistForward=39179;DistMin=24820;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=3:83853116-83855362;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:75:1/1:0:25:0:21:./.:0:0:0:0:1/1:0:31:1/1:3:146:2396:.:.
chr3	84104942	HG2_Ill_SVrefine2DISCOVARplusDovetail_8646	CCCTGGCAGCCACATATCTTTTTGACTGTCTTGACAGTTTTTTTTGTCTTTTCCTAAATGTTGTATAGTTGAAACCATACAGTGTGAAGCATTTTCATACTGACTTCTTCACTTAGTAATGTTAATTTAAGTTTCCTTCATGTCTTTTCATGGCTTGATACCTATATATTTTTTTTGCATTGGATAATAATCCAATTTTGGAAGTAGCACAATTTATTCAACCATTTACCTATTGAAAGTCATTTGGTTCTTTTCAAGCTTTGGCACTTGTGAATAAAGCTGATATAAATATACATGTACATGTTTGTTGTAAACATGAGTTTTTAACTTCTTTTGGTAAATAAATACCAAGGGGTGTGATTGATAGTACGGTAAGAACATATACAATTTTGTAAGAAAATGACAAACTATTTCCTAAAGTGTCTGTACTATTTTGTATTCTCACCAGCTATGAATGAGAGTTTCTATTGTTCTATGTACTTGCCAGCATATGGTGATTATAGCCTTCTGGATTTTGGCCATTCTAATAAATGAGTAGTTATATGTCATTGTTATTTTAATTTGTATTGACTTGATTACGTATGATGTCAGATACATTTTTATATGATTAATTGCCATATTTCTGTTTTCTTTGGTAAAGTGTCTTTTAGGGTCTTTGGCTCATTTTTTAATAGGCATGTTTGTTTTCTTATTTTTGAGTTTGAAATTTTTTTTTTGTATATTTCAGATAACACTTTATTATCAGATATATATTTTGCAAATACTTTCTTCCAATCTATGGCATGTCTTTTCATTCTCTTGATAGTGGGTTTAGCAGAGCAGAATTTTTTAAAATTTTATGTTTTAAGTTTTGCTTATCAATTTGCTCTTTCATGGATCATGCCTTTGGTGACATATCTAAAAAGTCATCATAAGTATAAGGTCATACATTTTTTTCTCCCATGTGAAATCCTAGGAGTTTTGTAGTTTTGTGTTTTACACTGAGGTCTATAATTCATTTTTTGTATACATTTTTGTGAAGGGTCTAAGTTATGTGTCTAGATTCACATTTTTGTATGTGCATTTCCACTTGCTCCGGCAGCATTGATGGAAATGACTATCTTATTTCTATTCTATTTCTTTTACTCCTTTATCAACGATCACTTGACTTTATTTGTGTCAATTTCTGGGGTCTCTATTCTGTTCCATAGATTGTCTAATATTTCACCAATACCGCAGTGCCTTCATTACTATAGTCAGAATTTTTAATGTGCAATATTTAAATTATTTAATCTTGTTTTAAGTATATGCTTTATATTGCTATGTTGCCAGAAAATGAGGAAGAGTGTTTTGTTTTTTGGGAAATTCTTCATTTTTTTTTAACTTGGTGTATTATAAATAAGATGATTATAACTTGTGCAATACTCATAGGTGTTTGAGAAAAAATAATCACCTTCTCTCTTAATTAAAACAGATAAAAAGAAAGAGAGAGAGGAGAGGAGGAGTGGAAAAGAGAGGGAGAGGGAGAAAAAGAGAGAAAGAGAAAGAGGACAGAAAGCAATTTGAATAGCAATTAGAATAGGTCAGCTGTGGAAAATGGCTTATAATTAAACCTAACATTTTAATGCCGGCAGGAGAAAATCATAAGACATTATAAAGAATTCATCAAATATTTAATTGACTGCCATAGAGAAAACATGCCTAATGAAGAGCTGGAGGAACCACGAATATAGTCTACAGAGAGCATTATCCTCAACACAAAATGCCTACACTGTGGTTATCAATAATTGAAATTATACTTGAGGTTAACATTGACCCTATGTAATTTTACTTTCCAGTTTGACATTAGAATTATACTCTGTGGAATATTGAACCCACCTTGTATATAATTCCAACATGAAATATCATTTTATACATATTTATTACTTCCTATATGAAAGATAGTATGTTAGGCCTAGGTGACATTAAAGCAAAGATAAGTAATGCCAGATCCAACCAAGCTTTTAGTATTATTGGGAAGAGATAAGAAATGAACAAATAAATTCATAAAACAAAACAGTAACAGTTTTTGAATATGTTGTGGAAAAAACAGAAGTACATAATAGATTGCAATGAAGTAGTACCTCAGATGGAATACTTGGGAGAACTTTTCTGTGGAGTTGGCATTTGTGGAGACACCTGAAAAATGAGAAGATGCCTGCCAATTGAAACACCTTGGAAACAGCCTTCCAGGCGAGGAAGTAGCAAATGCAGAGAAATAGTTAAAGTACTTATCATGGTGAGAAATAGAAATAAGGGCAGTGTGGCTGAACAGACTTCAATATTTGTATAAGGTGAGGATAGGGGTTTAAGAAGGGACCCCATTCTGTAAGATGTGGAAGGCTGTATATAGAGTTTATATTTTATTGAAAATTCAGCAGGAAGATATTGAAGGATTTAAATACAGAAAGGCAAGATCAAATTG	C	20	PASS	ClusterIDs=HG2_PB_pbsv_3451:HG2_PB_HySA_6518:HG2_10X_allpass_530:HG2_Ill_MetaSV_3272:HG2_Ill_tnscope_358:HG4_PB_SVrefine2PBcRDovetail_1792:HG4_Ill_MetaSV_3416:HG2_PB_assemblyticsfalcon_17858:HG2_PB_SVrefine2PB10Xhap12_2521:HG2_PB_SVrefine2Falcon1plusDovetail_8078:HG2_Ill_SpiralSDKrefine_11210:HG2_Ill_SVrefine2DISCOVARplusDovetail_8646:HG2_10X_SVrefine210Xhap12_2558:HG2_Ill_breakscan11_472:HG4_10X_allpass_623:HG4_Ill_Krunchall_4993:HG2_Ill_Krunchall_4792:HG4_PB_pbsv_3455;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2558:HG2_Ill_SVrefine2DISCOVARplusDovetail_8646:HG2_Ill_SpiralSDKrefine_11210:HG2_PB_SVrefine2Falcon1plusDovetail_8078:HG2_PB_SVrefine2PB10Xhap12_2521:HG2_PB_assemblyticsfalcon_17858:HG4_Ill_MetaSV_3416:HG4_PB_SVrefine2PBcRDovetail_1792;NumExactMatchSVs=8;ClusterMaxShiftDist=0.122416;ClusterMaxSizeDiff=0.122416;ClusterMaxEditDist=0.160546;PBcalls=7;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-2442;DistBack=112613;DistForward=-2442;DistMin=-2442;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:84104943-84107384;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:61:45:1|0:2:21:46:2:./.:0:0:0:0:0/1:59:22:0/1:191:82:2559:.:.
chr3	84699425	HG2_PB_SVrefine2PBcRplusDovetail_7476	TGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAGAAAAATACATGAGTTGTGAAATCAAAAATATAAAATGTGAGGGTAGGGAAGGGTAAAAATGTTGAGTTTGTTTTTGTTTACTTTGAGACAGGGCTGCATTCTGTTGCTCAGGTTGGAGTGCAGTGGCACAATTATAACTCACTGCAGCATTCAACTTCTGGGCTAAGGTGACCCTGTCTCCTAAGTAGCTAGGACCAAAGAAGGAGTGTATCACCATGACTGGCTAACTTTCTTTTTTGTAAAAATAGGGTCTCACTATGTTGCCCAGGCTGGTCTCAAACCCTGGCCTTTAGCAATCTTCCTGCTTCAGCCTCCCAAGGTGCTGAGATTACAACCATTAGTCACCATACCCAGTGGAGATTTTTTTTTAATGTGACCAGCATTAGGTTGCTATCAGCTTACAACAGTCTGTTAAGGTTATGTACGATTAAAAGATGTTTTACATATGCCTCATGGAAACCACAAAGAAAAAACCTGTAATAGATACACAAAAGATAAAAAGTAAGTAATCAAAGCATATCACCAGAGAAAATGACCTCATCTTAAAGGAAGACAATAAGAGAGGAGAAGCAACAAAACAACCAGAAACCAATTAATACAATATAAATATTAAATCCTTACCTATCAATAATAACTTTACATGTAAATGGATTAAATTCTTCAAACAAAAGAAATAGAGTGGGTGAATGGTGAAAAAAAAATCAACTATATGTTCCCTGTAAGACTTTAGTTTTAATGACACACACAGGCAGAAAGTGAAGAAATAGAGAAAGATATCCCATTCAAATAGTAAGCAAAAGAGATCCAGAGTGGCTATGACTGTTTCAGACAAAATAGAATTTAAGTCAACATTTTTCATAAGACACAAAAAGGTCATTATATAAAGGAGTCAATTTATCAATAAGCTCCAATAATTTTAGATATACATGCACCTAACATTGGAGCAGCTAAAGATATAAAGAAAGTATTAACAGAACTTAAGGGAAGTTAGATAGAAAGACAGTAATATTAGTAGTAGGAAGTCTCAATATCCCAATTTCAACAATAGTCAGACCATTCATACAGAAAATAAGGAAAACAGTTAACTTGAACAACACTTTAGACATAATGGACTTAAAAAACACATATTGGCAATTCCCTACAACTGCTGCAGCATACGCATTCTTTACAGATGAACATATAACTTCACTGGGAGAGATCATATGTCAGGAAACAAGTTTTAAAAATTTAAGATTGAAATCGTATCAAGTATGCTTTTAGACCACAATTATATGGAACTAGCAATCAATAGCAAGAGAAAAATTGTAAAATTTACAAAAATGTAGAAATTAAACAAGACACACATGACTAAACAATGGGTTACAAAAGAAACCAAATAGAAAATAAAATATATTACAAAGCAAATGAAAATGGAAAAGCAACAGTGCAGAACTTACAGGTTACAGTGAAAGCGATTCAAACAGGGAGATTCATGAAAACAAACACATATATTAAGAAAAAAGAAAGCTCTCAAATAAACAGCAGAACTATACACCTCAGGAAACTAGAAAAACAATAACAAGTGAAGATCAAAGTTGTTAGAAGAAACAAAATAATAAAGATCAGAGCAGAAATCGAATAAGATAAAAAATTAAAAATTATAGGAAAAATAATGAAACTGAGTTGGCTTCTTTTGAAAACATATACAAATTCTGAAACCTTTATTTAGACAAATAAAAAAGTAAAGAAGACACAAATAAATATATGAAGAAATGAAACAGTAGACATCCCAATTGATGTAACAGAAATACAAAGGATAATAAAATACCATGAACAATTATACACCACAAACTGGATAATGTAGGAGAAATGAATACATTCCTATAAACTTACAATGTACAAAGACTGAATCATAAAAAACCCAGAAATTCTGAAAAGAACAATAAATGTAAGGCGATTGAATGAGTATTCAAAACCCAATCAATGAAGAAAATTCGAGGGCTTAATAGCTTCACTGGTAAATTCTAGCAAACATCTAAAGAAGAATTAATGTTAATTGTTCTAAAACATTTCAATAACATTGAAGGAAATGAACACTTACAAACTAGTTCTATAAGACTAGCATTACCCTGATACTAAAGCCAGGAAGAAGAATACAAGAAAATAAAATTACAGGCTAATAACCCTGAAAAACATAGGTGCGAAAAACCTCAACAAGGTATTAGCAAACCTTTCTCAACAGCACATTAAAAGGATCACATGCCATGATCGGGTAAGATTTAGCTCTTGAATGAAAAGATGTTTCAATATGCACAAATCAATCAATATGATATAGCACCTTAATTAGCAGAATGAAGGGTAATAATTATATGACCATTTCAATAAATGTAGAAAATGCATTTGACGAAATCTGAAATATTTTCATGATTAAGAAATCATGATATCTTAGATATAGAAGAAGTGTACCTCAACATAATAAAGGCCATATATGATAAGCCCACAGCTAACATTATACTCAATTGTGCATATCTAAAAGAATTTCCTATCGTCAGAAACAAGGCAAAGATACTCGCTTTCATGACTTCTTTTGCATGTTGTACTAGAAATCCTAGCTAGAGCAATTAAAACAAAATATATCCAAATTCTAAAGGAGGAAGTAAAATTATCTCTATTTGCAGAAGACATAATGTTATATATAGAAAAGCTTAAAGATAACACCAAAAATCTGTCAGAACTAATAAAAAATTTGTAAACTGATAGAAACAACTAATACATAATATATATAATAAAAATAATCAGAAGAAATTGTATACCTTATCTGAAAAAGAAATCAAGAAAATAATCCCATTCACCATAGCAGCAAAAAGAATAAAATAATTAGGAATAAATTTAACCAAGGAGGTGAAAGGACTGTACACTGAAAATTATAAAACATCAATGAAAGAAATTGAAGACAAATAAATGGAAAGACATCTCCTATTTATATCAAAAATAGTTAATATTGTTAAAAATGACCATACTACTCAAATTGATCTACAACTTCAATGCACTCTCTATCAAAGTCTTAATGGCACTCATTACAGAAATGTAAAAAATAATCCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGTCACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3273:HG2_PB_pbsv_3455:HG2_10X_allpass_531:HG2_PB_HySA_6527:HG4_Ill_MetaSV_3417:HG4_PB_SVrefine2PBcRDovetail_1794:HG2_PB_SVrefine2PBcRplusDovetail_7476:HG2_PB_SVrefine2PB10Xhap12_2525:HG2_PB_SVrefine2Falcon2Bionano_1587:HG2_PB_SVrefine2Falcon1plusDovetail_8081:HG2_10X_SVrefine210Xhap12_2559:HG4_PB_pbsv_3458;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2559:HG2_PB_SVrefine2Falcon1plusDovetail_8081:HG2_PB_SVrefine2Falcon2Bionano_1587:HG2_PB_SVrefine2PB10Xhap12_2525:HG2_PB_SVrefine2PBcRplusDovetail_7476:HG4_PB_SVrefine2PBcRDovetail_1794;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0698091;ClusterMaxSizeDiff=0.0698091;ClusterMaxEditDist=0.0698091;PBcalls=8;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-3360;DistBack=25766;DistForward=-3238;DistMin=-3238;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3990;REFWIDENED=3:84689524-84706775;PctSeqSimilarity=0.9865;PctSizeSimilarity=1;PctRecOverlap=0.9932;SizeDiff=0;StartDistance=-23;EndDistance=-23;GTMatch=0;TruScore=99;MatchId=2544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:62:49:0|1:55:1:2:28:./.:0:0:0:0:0/1:32:23:0/1:184:99:3441:.:.
chr3	86213403	HG4_PB_SVrefine2Falcon1Dovetail_2087	ATTAACGTATATAAACTTTCATAGCCAAATAAAATATAGAGGCAAATCTCTGAAATTAAAATGTTTTATTTGGAAGAAAATAATTGCAATTCTGGGCATATACATAGACCAGCTGGTCTTCTATATGTCCAAAGAACAAAGAGAAGATGAGAGATTTTGTAAAAAGGATAAATGTTATGTATTTCTCTTTGAAAAAAATTCATTGGCATTGGTAAGGTCTTGAGGAACTGGCAAGTTCTGATTAGTGAGTGACAGCAGTGGCAAACTAGTCTTAGAGTTGCAGCAGGTCGTTTCAGTAGCCACTACATAAAACTACTT	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_4819:HG2_PB_SVrefine2PBcRplusDovetail_7480:HG2_PB_assemblyticsPBcR_17270:HG3_PB_pbsv_3395:HG2_PB_SVrefine2PB10Xhap12_2533:HG2_10X_allpass_532:HG4_PB_HySA_5157:HG2_PB_HySA_6538:HG4_PB_pbsv_3463:HG4_PB_assemblyticsfalcon_17474:HG3_PB_assemblyticsfalcon_17783:HG3_Ill_MetaSV_3448:HG2_Ill_tnscope_359:HG2_Ill_MetaSV_3274:HG4_PB_SVrefine2PBcRDovetail_1797:HG4_PB_SVrefine2Falcon1Dovetail_2087:HG4_Ill_svaba_4398:HG4_Ill_manta_829:HG4_Ill_MetaSV_3418:HG4_Ill_GATKHCSBGrefine_2400:HG4_10X_allpass_624:HG3_PB_SVrefine2Falcon1Dovetail_2145:HG3_Ill_svaba_4421:HG3_Ill_scalpel_3491:HG3_Ill_manta_773:HG3_Ill_SVrefine2DISCOVARDovetail_2599:HG3_Ill_GATKHCSBGrefine_2330:HG3_10X_allpass_663:HG2_PB_pbsv_3461:HG2_PB_assemblyticsfalcon_17879:HG2_PB_SVrefine2PB10Xhap12_2532:HG2_PB_SVrefine2Falcon1plusDovetail_8085:HG2_Ill_svaba_4312:HG2_Ill_breakscan11_473:HG2_Ill_SpiralSDKrefine_11224:HG2_Ill_SVrefine2DISCOVARplusDovetail_8655:HG2_Ill_GATKHCSBGrefine_2316:HG2_10X_SVrefine210Xhap12_2565:HG4_Ill_Krunchall_5015:HG3_Ill_Krunchall_4791;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2565:HG2_Ill_GATKHCSBGrefine_2316:HG2_Ill_SVrefine2DISCOVARplusDovetail_8655:HG2_Ill_SpiralSDKrefine_11224:HG2_Ill_breakscan11_473:HG2_Ill_svaba_4312:HG2_PB_SVrefine2Falcon1plusDovetail_8085:HG2_PB_SVrefine2PB10Xhap12_2532:HG2_PB_assemblyticsfalcon_17879:HG2_PB_pbsv_3461:HG3_10X_allpass_663:HG3_Ill_GATKHCSBGrefine_2330:HG3_Ill_SVrefine2DISCOVARDovetail_2599:HG3_Ill_manta_773:HG3_Ill_scalpel_3491:HG3_Ill_svaba_4421:HG3_PB_SVrefine2Falcon1Dovetail_2145:HG4_10X_allpass_624:HG4_Ill_GATKHCSBGrefine_2400:HG4_Ill_MetaSV_3418:HG4_Ill_manta_829:HG4_Ill_svaba_4398:HG4_PB_SVrefine2Falcon1Dovetail_2087:HG4_PB_SVrefine2PBcRDovetail_1797;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0633914;ClusterMaxSizeDiff=0.0633914;ClusterMaxEditDist=0.0633914;PBcalls=16;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=84171;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:86213404-86213723;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2545.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:51:./.:5:30:28:11:./.:0:0:0:0:0/1:56:20:0/1:26:9:.:.:.
chr3	88485023	HG3_Ill_150bpfermikitraw_4530	ATGTGCATTATATATATAATGCACATTATGTGTGCATTATATATATAATGCACATTATG	A	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_17495:HG3_PB_pbsv_3406:HG2_PB_pbsv_3472:HG3_PB_HySA_5368:HG3_PB_SVrefine2Falcon1Dovetail_2152:HG3_Ill_scalpel_3507:HG3_Ill_manta_776:HG3_Ill_SVrefine2DISCOVARDovetail_2612:HG3_Ill_Krunchall_4817:HG3_Ill_GATKHC_5790:HG3_Ill_GATKHCSBGrefine_2344:HG3_Ill_250bpfermikitraw_4678:HG3_Ill_150bpfermikitraw_4530:HG3_10X_allpass_664:HG2_PB_assemblyticsfalcon_17900:HG2_PB_SVrefine2PBcRplusDovetail_7485:HG2_Ill_scalpel_3388:HG2_Ill_SpiralSDKrefine_11236:HG2_Ill_SVrefine2DISCOVARplusDovetail_8661:HG2_Ill_Krunchall_4846:HG2_Ill_GATKHC_5699:HG2_Ill_GATKHCSBGrefine_2328:HG2_Ill_250bpfermikitraw_4765:HG2_Ill_150bpfermikitraw_4428:HG2_10X_SVrefine210Xhap12_2576;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2576:HG2_Ill_150bpfermikitraw_4428:HG2_Ill_250bpfermikitraw_4765:HG2_Ill_GATKHCSBGrefine_2328:HG2_Ill_GATKHC_5699:HG2_Ill_Krunchall_4846:HG2_Ill_SVrefine2DISCOVARplusDovetail_8661:HG2_Ill_SpiralSDKrefine_11236:HG2_Ill_scalpel_3388:HG2_PB_SVrefine2PBcRplusDovetail_7485:HG2_PB_assemblyticsfalcon_17900:HG3_10X_allpass_664:HG3_Ill_150bpfermikitraw_4530:HG3_Ill_250bpfermikitraw_4678:HG3_Ill_GATKHCSBGrefine_2344:HG3_Ill_GATKHC_5790:HG3_Ill_Krunchall_4817:HG3_Ill_SVrefine2DISCOVARDovetail_2612:HG3_Ill_manta_776:HG3_Ill_scalpel_3507:HG3_PB_SVrefine2Falcon1Dovetail_2152;NumExactMatchSVs=21;ClusterMaxShiftDist=0.201835;ClusterMaxSizeDiff=0.201835;ClusterMaxEditDist=0.205607;PBcalls=7;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-58;DistBack=-30;DistForward=-14;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=45;REFWIDENED=3:88485024-88485126;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2547.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:30:1|0:2:28:19:1:./.:0:0:0:0:0/1:21:33:./.:.:.:.:.:.
chr3	97082015	HG4_Ill_GATKHC_5826	AATATATATATATATATATATATATATATATATATATATATATATATATAT	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_2337:HG2_PB_assemblyticsfalcon_17938:HG4_Ill_Krunchall_5089:HG4_Ill_GATKHC_5826:HG4_Ill_GATKHCSBGrefine_2425:HG4_Ill_250bpfermikitraw_4879:HG4_Ill_150bpfermikitraw_4637:HG2_Ill_scalpel_3408:HG2_Ill_Krunchall_4885;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2337:HG4_Ill_Krunchall_5089:HG4_Ill_GATKHC_5826:HG4_Ill_GATKHCSBGrefine_2425:HG4_Ill_250bpfermikitraw_4879:HG4_Ill_150bpfermikitraw_4637:HG2_Ill_scalpel_3408:HG2_Ill_Krunchall_4885;NumExactMatchSVs=8;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0196078;PBcalls=1;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=141862;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=3:97082016-97082082;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2549.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:32:./.:0:0:0:0:./.:0:0:0:0:0/1:18:22:./.:.:.:.:.:.
chr3	98899060	HG4_PB_SVrefine2Falcon1Dovetail_2112	ACTTTTCAAATAAAATAGAAATGTTAGTCTTGACAGAATCTCCTCAGAAGATTTGTAGACAGTAGCAATATGAACTTTCATTTTAATTCATTTCACCTCGGCCTCCCAAGGTGCTGGGATTACAGGTGTGGGCCACAGCATCAGGCCTATTTTCTTTTTTGTTGTTATTGAGAAAGTGTCTCTGTTGCTCAGGCTGGAGTGCAGTGGTGGGATCATGGCTCACAGCAACCGCCGCCTCCTGGGCTCAAGCAATTCTCCCACCTCAGCCTCCAGAATAGTTGGAACTACATGCCACCTCACCCAGTTAATTTTTGTATTTTTTTGTAGAGACAGGATTTCACCATGTTGCCCAGATGATCTAGAACTTCTGAGATCAAGCAGTCCACCCACTTTGGCCTCCCAAAGTGCTGAGATTACAGGGGTGAGTCAATGCACCTGGCCTAAAGCAATTGAGTACTAACATTAATTTTTGCTATAAAGACTGGCACCATTGACCTTTACCTAAAGACAGCTAATGAGCTCCATTTAGTCAGTTACATAATTTACCTTCCCAATACCAAGGATATCTAAAATCCTAGAAATTATTTCAGTTGTTTAGAGATTTATTTCAATTATTAACAACTGTATATAGTAAAAGCATTGTTCTTGAGCTAAATTACGAAAAATGATCAAGCATATAAACCACTTATGAAGCATTCACTTATATGCTGGTTTCATGTGAGTCACAAACTTAATATTCTAAGCAACCATTTCAGCTAAAATTTTTTGAATACTGTTTTCTAGATGTATAGCTGTTCCAATATTTACTTGTTTGGGCTTGTTCAACACCACATTGTCTAGATAGAATGACTTGTAGAGTAACTGGTTCTAATTACATTTCAAAACTTTACTATATATTTTATTTATATTACTAAGACTCATTTTGTTCTAATTGTTACCAAATATCAGCTCTTATTGTTATTAAAACCAGAGTTGTTTACAAGTTAGCCAATTTTGTGAGAGTAGCAAAATATATTTTAAAGCCAAAGTAATTAATGCTCATGTATATAGTTAGTTTTGCAAAAGTAAAGAACAAGACAAAACAAAACAAGACACTAAAGACTTTCCATAAAGGTGAACATCTTTGGACAGAGTGGGGAGAGTTTCAGTTGAGCTTATCTAGGCTCATGAGAATCAATCTTGTTCTTGGGACTCTTGACTTTTAGCCAAAATATGATCTCTATTTAATTCAGGGGAACCTGGAGAATTTTCCTCAAATGAAGAACAAAGATTGTATAGAACATGTATCATATTTGCTAATTAGTATTTACCCTCTCATTTTAGTAGCAAAGTGATTTTTTTAGGTAAAGGGTTAATAATGATTTGATTTTATATATCTTGAAAGACACTCTTCTCCATCCAAAGGTATGAATGAAATTCATTAGGAAGAAAATTATATTCCTATAATACAGCTCCTTATGCTAACTAGTTTAGTAACCTTTTTATCTAACCTTTTCCAAGGGAAAGCTGAGATTGAAGATGACTATTCCATCCTCAATAAAGGATGCTTGCATACACAACACATGATAGACAATGTTTAATTCATTAACTGGCTAGAATCTAGGTAATAAAAGAGGGACAGCTGGGTGCCTGATGGAGCATCCCTCTGTACACTTTAGAATAATTTATCTTAAGTCATGAGGCATGGGAAATGAATTTGTATTACTGGAGAAAATGGTTCTAATCAAAATTAAAGGAAGATTGAAAACTCTGATCTAAACACATTGCTGGAACTATCTGATATCTAGCTGTTGGGGTTTAAGAAAAGGCCTAAGCAACTGGATGCATGCAAGATTAAAGGAATTAGGATTATTTGGTTTGGAGAAAGCACAGTCGGAAAGTTACTGACCATGATTATTTAAACATGATATTATTTGGAGGATGTTGATCAGCTGTTCTCCAGCCCCAGTATGCCCTTCATGTAAAAAAAAAATATTTAAAATAGCAAAAAGAGAAATACAGACTAGGTAACATGAGGAATTTACAAACCCTAGTGTGAAGATATCACGATTTAGAAAAAAAGACCATATAAATGATTATTATAAATAATCGTTGAGGGAGCTCACATCCAGCCATATAAATCCCATAACAGACTGTTTGTACAAACATTCTAGGTAACATATTCATGGCATTCATTTGGATTAAAGAGAAGTGTCTAGTTACATGATTACATAAATTGGAAGGTAATGATTTTTATGTCACTTAAAAGTAAAAAAAAAAAAAAAAAAAAAAAACACGTGCCAGAGTGCCTATTTTTCTTTTAAAAGCATTGAACTCTTTCCCAAGCTAAAGATGCAATCTTTGCAACACTTGCTGTCATTCTTTGATCCCATGGTCATAATAGAAAGGCATTCAACAGAGAGCAGAAAAATCCACTCTGCTGTTCTCCTGATGTTCCCACATTTTTCTTTCTTTTTTTTTTTTCGAGACAGAGTCTCGCTCTGTCTCCCAGGCTGGAGTTCAGTGGCGCGACCTCGGCTCACTGCAAGCTCTGCTTCTCAGGTTCACGCCACTCTCCTGCCTCAGCCTCCCGTGCAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTCTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCGCGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCCCCCAGCCCTCCTGATGTTCCCACATTTTTCTTAGTAAAAATTATTAGCTGAAATTGCTTTGAATTAATGGAGTCTGTGTGGCTGAGAATATGCTTTGCTCCACTGGATGGAAGAGACTGGGCTGGCTTGATACCTTGGCAAGGCAAACTAGAAACACTAGTAGCCTATCAACAAAAGTTTAGCATGATGACAGAAAACGAGTATTCAGACCAAAACCAAAATGGATTATATAACCTAGATGCATTTGTGTATAAAACTTTCCAATTTTTCAGTCTAGAGGTATTACAGTTAGTAGCAGAAATGCGGTGTCTTTATGCTTGTATATTATGAGTTTTTAAAATGTGATACAACTGATTTTTGATTAACTTTATAAAGTTACAATTTCCATACAATAAAATGCACCTATTTAAGTGTACATTTCAATGAGCTTCAACAAGCATAATAACTAAGTAGCCACCATCACAATGAAGATATAGAATATTTCCATCATCTTAAGAAGTTCTCTTATGCCCTTTCCCAAAACACATCTTCCAAACTTCAGCTCAGGCAAAAACTCATCTGCCACCTGTCACTATAGATCACATTTTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2599:HG4_PB_assemblyticsfalcon_17544:HG3_PB_assemblyticsfalcon_17846:HG2_PB_assemblyticsfalcon_17955:HG2_PB_assemblyticsPBcR_17325:HG3_PB_pbsv_3436:HG4_10X_allpass_628:HG4_Ill_Krunchall_5100:HG2_Ill_Krunchall_4898:HG2_10X_allpass_534:HG3_10X_allpass_668:HG2_PB_HySA_6624:HG2_Ill_tnscope_360:HG4_PB_pbsv_3510:HG4_PB_SVrefine2PBcRDovetail_1814:HG4_PB_SVrefine2Falcon1Dovetail_2112:HG4_Ill_SVrefine2DISCOVARDovetail_2647:HG4_Ill_MetaSV_3429:HG4_Ill_GATKHCSBGrefine_2434:HG3_PB_SVrefine2PBcRDovetail_1602:HG3_PB_SVrefine2Falcon1Dovetail_2174:HG3_Ill_SVrefine2DISCOVARDovetail_2651:HG3_Ill_MetaSV_3460:HG3_Ill_Krunchall_4854:HG3_Ill_GATKHCSBGrefine_2362:HG2_PB_pbsv_3501:HG2_PB_SVrefine2PBcRplusDovetail_7502:HG2_PB_SVrefine2PB10Xhap12_2559:HG2_PB_SVrefine2Falcon2Bionano_1609:HG2_PB_SVrefine2Falcon1plusDovetail_8111:HG2_Ill_SpiralSDKrefine_11264:HG2_Ill_SVrefine2DISCOVARplusDovetail_8696:HG2_Ill_MetaSV_3285:HG2_Ill_GATKHCSBGrefine_2345;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2599:HG4_PB_pbsv_3510:HG4_PB_SVrefine2PBcRDovetail_1814:HG4_PB_SVrefine2Falcon1Dovetail_2112:HG4_Ill_SVrefine2DISCOVARDovetail_2647:HG4_Ill_MetaSV_3429:HG4_Ill_GATKHCSBGrefine_2434:HG3_PB_SVrefine2PBcRDovetail_1602:HG3_PB_SVrefine2Falcon1Dovetail_2174:HG3_Ill_SVrefine2DISCOVARDovetail_2651:HG3_Ill_MetaSV_3460:HG3_Ill_Krunchall_4854:HG3_Ill_GATKHCSBGrefine_2362:HG2_PB_pbsv_3501:HG2_PB_SVrefine2PBcRplusDovetail_7502:HG2_PB_SVrefine2PB10Xhap12_2559:HG2_PB_SVrefine2Falcon2Bionano_1609:HG2_PB_SVrefine2Falcon1plusDovetail_8111:HG2_Ill_SpiralSDKrefine_11264:HG2_Ill_SVrefine2DISCOVARplusDovetail_8696:HG2_Ill_MetaSV_3285:HG2_Ill_GATKHCSBGrefine_2345;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00722022;ClusterMaxSizeDiff=0.00722022;ClusterMaxEditDist=0.00722022;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3329;DistBack=20513;DistForward=2053;DistMin=2053;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=3:98899061-98902401;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2551.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:125:1/1:1:43:0:23:./.:0:0:0:0:1/1:0:32:1/1:1:243:3280:.:.
chr3	99037445	HG3_PB_SVrefine2PBcRDovetail_1603	GGAAATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3286:HG4_PB_HySA_5232:HG4_PB_assemblyticsfalcon_17547:HG3_PB_assemblyticsfalcon_17849:HG2_PB_assemblyticsfalcon_17960:HG2_PB_assemblyticsPBcR_17329:HG4_Ill_Krunchall_5105:HG3_Ill_Krunchall_4857:HG2_Ill_Krunchall_4905:HG3_PB_pbsv_3437:HG3_PB_HySA_5420:HG2_PB_HySA_6631:HG4_PB_pbsv_3513:HG4_PB_SVrefine2PBcRDovetail_1816:HG4_PB_SVrefine2Falcon1Dovetail_2113:HG4_Ill_scalpel_3321:HG4_Ill_manta_841:HG4_Ill_SVrefine2DISCOVARDovetail_2651:HG4_Ill_GATKHCSBGrefine_2437:HG3_PB_SVrefine2PBcRDovetail_1603:HG3_PB_SVrefine2Falcon1Dovetail_2175:HG3_Ill_scalpel_3535:HG3_Ill_manta_778:HG3_Ill_SVrefine2DISCOVARDovetail_2652:HG3_Ill_GATKHCSBGrefine_2364:HG3_10X_allpass_669:HG2_PB_pbsv_3504:HG2_PB_SVrefine2PBcRplusDovetail_7504:HG2_PB_SVrefine2PB10Xhap12_2560:HG2_PB_SVrefine2Falcon2Bionano_1610:HG2_PB_SVrefine2Falcon1plusDovetail_8113:HG2_Ill_scalpel_3420:HG2_Ill_manta_979:HG2_Ill_SVrefine2DISCOVARplusDovetail_8699:HG2_Ill_GATKHCSBGrefine_2349:HG2_10X_allpass_536:HG2_10X_SVrefine210Xhap12_2601:HG2_Ill_breakscan11_475:HG4_Ill_MetaSV_3430:HG3_Ill_MetaSV_3461:HG2_Ill_tnscope_361;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2601:HG2_10X_allpass_536:HG2_Ill_GATKHCSBGrefine_2349:HG2_Ill_SVrefine2DISCOVARplusDovetail_8699:HG2_Ill_manta_979:HG2_Ill_scalpel_3420:HG2_PB_SVrefine2Falcon1plusDovetail_8113:HG2_PB_SVrefine2Falcon2Bionano_1610:HG2_PB_SVrefine2PB10Xhap12_2560:HG2_PB_SVrefine2PBcRplusDovetail_7504:HG2_PB_pbsv_3504:HG3_10X_allpass_669:HG3_Ill_GATKHCSBGrefine_2364:HG3_Ill_SVrefine2DISCOVARDovetail_2652:HG3_Ill_manta_778:HG3_Ill_scalpel_3535:HG3_PB_SVrefine2Falcon1Dovetail_2175:HG3_PB_SVrefine2PBcRDovetail_1603:HG4_Ill_GATKHCSBGrefine_2437:HG4_Ill_SVrefine2DISCOVARDovetail_2651:HG4_Ill_manta_841:HG4_Ill_scalpel_3321:HG4_PB_SVrefine2Falcon1Dovetail_2113:HG4_PB_SVrefine2PBcRDovetail_1816;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0581583;ClusterMaxSizeDiff=0.0581583;ClusterMaxEditDist=0.0581583;PBcalls=18;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=3840;DistForward=65817;DistMin=3840;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=3:99037446-99037766;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:86:1/1:0:34:0:47:./.:0:0:0:0:1/1:0:62:./.:2:20:.:.:.
chr3	99605060	HG2_Ill_250bpfermikitraw_4825	TTTATCACTATGCTGAGTTCCTGGTGAGAGGGGAATGAGTGTAAAGCAGGGATG	T	20	PASS	ClusterIDs=HG4_PB_HySA_5235:HG2_PB_HySA_6635:HG2_PB_pbsv_3505:HG4_PB_pbsv_3514:HG4_PB_SVrefine2PBcRDovetail_1817:HG4_Ill_svaba_4477:HG4_Ill_manta_842:HG4_Ill_SVrefine2DISCOVARDovetail_2652:HG4_Ill_Krunchall_5108:HG4_Ill_GATKHCSBGrefine_2438:HG4_Ill_250bpfermikitraw_4898:HG4_Ill_150bpfermikitraw_4656:HG2_PB_SVrefine2PBcRplusDovetail_7505:HG2_PB_SVrefine2PB10Xhap12_2561:HG2_PB_SVrefine2Falcon2Bionano_1611:HG2_PB_SVrefine2Falcon1plusDovetail_8114:HG2_Ill_svaba_4391:HG2_Ill_manta_980:HG2_Ill_SpiralSDKrefine_11267:HG2_Ill_GATKHCSBGrefine_2350:HG2_Ill_250bpfermikitraw_4825:HG2_Ill_150bpfermikitraw_4483;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4483:HG2_Ill_250bpfermikitraw_4825:HG2_Ill_GATKHCSBGrefine_2350:HG2_Ill_SpiralSDKrefine_11267:HG2_Ill_manta_980:HG2_Ill_svaba_4391:HG2_PB_SVrefine2Falcon1plusDovetail_8114:HG2_PB_SVrefine2Falcon2Bionano_1611:HG2_PB_SVrefine2PB10Xhap12_2561:HG2_PB_SVrefine2PBcRplusDovetail_7505:HG4_Ill_150bpfermikitraw_4656:HG4_Ill_250bpfermikitraw_4898:HG4_Ill_GATKHCSBGrefine_2438:HG4_Ill_Krunchall_5108:HG4_Ill_SVrefine2DISCOVARDovetail_2652:HG4_Ill_manta_842:HG4_Ill_svaba_4477:HG4_PB_SVrefine2PBcRDovetail_1817;NumExactMatchSVs=18;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0377358;PBcalls=9;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-53;DistBack=82831;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=54;REFWIDENED=3:99605061-99605167;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2553.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:24:2:1:25:./.:0:0:0:0:0/1:34:27:./.:.:.:.:.:.
chr3	99628783	HG2_PB_SVrefine2PBcRplusDovetail_7506	CATCTGACCAAAATGAGTGAGAAATTTCAGTTCTCGGGGCAAAATGTGTATTCAGAGCTGAAATTTTGTTTAAGAATAAGGCTGATTACTTAACAGTGAAGGGCTTCAGTGTGGGGTCAGCTCACCCTCATTGCACTTTCAAGTATAATATTAGGTATTCTTAGATGTCCAGAACCTGTGAAATTCTTAATAGAGTTGGTTTATACGTAATTTCTATTCTTTGACTTACAAGAACTTAAATCTTGTCTAAAAACCTGTATGGATTTCAAAGGCTTAGAGAGGATTAAAAGGCTATAAAAATTTAAATAACTTCATCCAGTGAGTATGTTTACCTAAATGTGTCATCAAACTTCTCAGCTTTCTGGTTAGAAAACTGGTTTGGGACACACTGACTCACACTGTCGACTGATAGAATGCAAACACATTCAGAATTCTCCTGGCAAGACTAATGTAACAAAAACAGGGTTCTGTGAGCTTTTAGAGGTGAAATGTTTCATTTCTTTAATAAATCTTCCTATCACTGAGAGCTTTTAAAGTAAACAAACACATGTCTTCACAGTTGTTAGGTGCTAGGTGAAGTGGCAGATGCATGTTGTTATATCCAGTACCCCTTACCACTTTCCAAGGAAACAATTTTTGTAGGTAACCTGGGGAGTATTATGTTTTAGCCCTTAGGCTGAAAAAAAGTAATACGCTATAATTCTAACTATTATCTCCATATGTAAATAAACATTTTATGGGGTTTATATTTTCCCTTTGGCCTATAGATCTCAAATTCTTTGCCCAAATAGTTACCCATACTCTTCTCAGAACCCTCATGCAAGAAAGTAGATAACTAGAATATTTATG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3287:HG4_Ill_GATKHCSBGrefine_2439:HG2_Ill_GATKHCSBGrefine_2351:HG3_PB_SVrefine2Falcon1Dovetail_2176:HG2_Ill_tnscope_362:HG4_PB_SVrefine2PBcRDovetail_1818:HG4_PB_SVrefine2Falcon1Dovetail_2114:HG4_Ill_manta_843:HG4_Ill_SVrefine2DISCOVARDovetail_2653:HG4_Ill_Cortex_2414:HG3_Ill_Cortex_2443:HG2_PB_SVrefine2PBcRplusDovetail_7506:HG2_PB_SVrefine2PB10Xhap12_2562:HG2_PB_SVrefine2Falcon2Bionano_1612:HG2_PB_SVrefine2Falcon1plusDovetail_8115:HG2_Ill_manta_981:HG2_Ill_SVrefine2DISCOVARplusDovetail_8700:HG2_Ill_Cortex_5707:HG2_10X_SVrefine210Xhap12_2602:HG2_Ill_breakscan11_476:HG2_Ill_SpiralSDKrefine_11268:HG3_PB_assemblyticsfalcon_17851:HG4_Ill_Spiral_281:HG4_Ill_MetaSV_3431:HG2_Ill_Spiral_238:HG4_PB_assemblyticsfalcon_17549:HG2_PB_assemblyticsfalcon_17963:HG2_PB_assemblyticsPBcR_17332:HG4_PB_pbsv_3515:HG2_PB_pbsv_3506:HG2_10X_allpass_537:HG4_Ill_Krunchall_5109:HG4_10X_allpass_630;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2602:HG2_Ill_Cortex_5707:HG2_Ill_SVrefine2DISCOVARplusDovetail_8700:HG2_Ill_manta_981:HG2_PB_SVrefine2Falcon1plusDovetail_8115:HG2_PB_SVrefine2Falcon2Bionano_1612:HG2_PB_SVrefine2PB10Xhap12_2562:HG2_PB_SVrefine2PBcRplusDovetail_7506:HG3_Ill_Cortex_2443:HG4_Ill_Cortex_2414:HG4_Ill_SVrefine2DISCOVARDovetail_2653:HG4_Ill_manta_843:HG4_PB_SVrefine2Falcon1Dovetail_2114:HG4_PB_SVrefine2PBcRDovetail_1818;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00589275;ClusterMaxSizeDiff=0.00589275;ClusterMaxEditDist=0.00589275;PBcalls=13;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=3;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-848;DistBack=23668;DistForward=3903;DistMin=3903;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:99628783-99629631;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9988;PctRecOverlap=0.9976;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2554.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:33:0|1:36:0:1:27:./.:0:0:0:0:0/1:64:12:0/1:68:23:.:.:.
chr3	99785350	HG2_Ill_GATKHCSBGrefine_2354	AGGCTTTGCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_477:HG2_PB_assemblyticsPBcR_17335:HG4_Ill_Krunchall_5111:HG2_Ill_Krunchall_4911:HG2_Ill_Spiral_239:HG4_PB_pbsv_3517:HG4_PB_SVrefine2PBcRDovetail_1819:HG2_PB_pbsv_3508:HG2_PB_HySA_6637:HG2_Ill_tnscope_363:HG2_Ill_MetaSV_3288:HG4_Ill_scalpel_3326:HG4_Ill_manta_844:HG4_Ill_SVrefine2DISCOVARDovetail_2656:HG4_Ill_MetaSV_3432:HG4_Ill_GATKHCSBGrefine_2441:HG4_10X_allpass_631:HG2_PB_SVrefine2PBcRplusDovetail_7508:HG2_Ill_scalpel_3424:HG2_Ill_SVrefine2DISCOVARplusDovetail_8703:HG2_Ill_GATKHCSBGrefine_2354:HG2_10X_allpass_538:HG2_10X_SVrefine210Xhap12_2603:HG4_Ill_Spiral_282;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2603:HG2_10X_allpass_538:HG2_Ill_GATKHCSBGrefine_2354:HG2_Ill_SVrefine2DISCOVARplusDovetail_8703:HG2_Ill_scalpel_3424:HG2_PB_SVrefine2PBcRplusDovetail_7508:HG4_10X_allpass_631:HG4_Ill_GATKHCSBGrefine_2441:HG4_Ill_MetaSV_3432:HG4_Ill_SVrefine2DISCOVARDovetail_2656:HG4_Ill_manta_844:HG4_Ill_scalpel_3326;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0830565;ClusterMaxSizeDiff=0.0830565;ClusterMaxEditDist=0.0830565;PBcalls=6;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=51610;DistForward=-294;DistMin=-294;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=3:99785351-99785669;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:35:0|1:42:4:0:25:./.:0:0:0:0:0/1:24:21:0/1:19:6:.:.:.
chr3	100306747	HG3_PB_SVrefine2Falcon1Dovetail_2179	TAAGAAAGTGATTTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCCAAGAGGCGGAGCTTGCAGTGAGCCGGGATAGCGCCACTGCAGTCCAGCTTGGGCGAAAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_3439:HG3_Ill_MetaSV_3464:HG2_Ill_MetaSV_3291:HG3_PB_HySA_5428:HG3_Ill_Spiral_3814:HG2_Ill_Spiral_240:HG2_PB_assemblyticsfalcon_17970:HG2_PB_pbsv_3511:HG3_PB_assemblyticsfalcon_17859:HG2_PB_SVrefine2PB10Xhap12_2567:HG3_Ill_MetaSV_3463:HG2_Ill_tnscope_364:HG2_Ill_MetaSV_3290:HG3_PB_SVrefine2PBcRDovetail_1605:HG3_PB_SVrefine2Falcon1Dovetail_2179:HG3_Ill_manta_779:HG3_Ill_Krunchall_4866:HG3_Ill_GATKHCSBGrefine_2367:HG3_10X_allpass_670:HG2_PB_SVrefine2PB10Xhap12_2566:HG2_PB_SVrefine2Falcon1plusDovetail_8119:HG2_Ill_manta_983:HG2_Ill_breakscan11_478:HG2_Ill_Krunchall_4915:HG2_Ill_GATKHCSBGrefine_2356:HG2_10X_allpass_539:HG2_10X_SVrefine210Xhap12_2605;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2605:HG2_10X_allpass_539:HG2_Ill_GATKHCSBGrefine_2356:HG2_Ill_Krunchall_4915:HG2_Ill_breakscan11_478:HG2_Ill_manta_983:HG2_PB_SVrefine2Falcon1plusDovetail_8119:HG2_PB_SVrefine2PB10Xhap12_2566:HG3_10X_allpass_670:HG3_Ill_GATKHCSBGrefine_2367:HG3_Ill_Krunchall_4866:HG3_Ill_manta_779:HG3_PB_SVrefine2Falcon1Dovetail_2179:HG3_PB_SVrefine2PBcRDovetail_1605;NumExactMatchSVs=14;ClusterMaxShiftDist=0.260745;ClusterMaxSizeDiff=0.260745;ClusterMaxEditDist=0.260745;PBcalls=10;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=43821;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=3:100306748-100307082;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2556.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:22:0|1:37:0:0:21:./.:0:0:0:0:0/1:25:20:0/1:27:13:.:.:.
chr3	101357565	HG2_Ill_MetaSV_3292	TACAGCTTGTGCTCAGGTAAACGCCAAGCAGCGTCCTAAACCCAGACCAGGCCACTGCCTCTGGGGAGACTACCAGGAGAAAGGTGGGAAATTGACTTTACAGAGATAAAACTGCACCAGGCAGGGTATAAATACCTCCTGATACTGGTAGACACCTTTTCCGGATGGACTGAGGCATTTGCCACCAGAAACGAGACTGCCACCACGGTAGTTAGGCTTTTACTCAATGAGATCATCCGTCGGCATGGGCTGCCTGCTGCCATAGGGTCTAATAACGGACTGGCCTTCACCTTGTCCATAGCTCGGTCAGTAAGGCACTAAACATTCAATGGAAGCTCCATTGTGTCTATCAACCCCAGAGCTCTGGGGAGGTAGAATGCATGAACCGCACCCTAAAAAGTACTCTTACAAAATTAATCCTAGAAACTGGTGAAAACTGGGTAAAGCTCCTTCCTCTAGCCCTTCTTAGATTAAGATGCACTCCTTATGGGGCTGGGTTTTCACCTTTTGAAATCATGTATGGAAGGGCTCCGCCTATCTTGCTTAAGCTAAGGGATACCCATTTAGCAAAAATCTCACAAGCTAATTTGTTACAGTACGTGCAGTCTCTCCAACAGGTACAAGACATCATCCAGCCGCTTGTCTGGGGAGCTCATCCCAATCCAGTTCCTGACCAGATGGGGCCCTGCCACTCTTTCCAGCCAGGTGACCTGGTGTATGTTAAAAAGTTCCAGAAAGAAGGACTCACTCTTGCCTGGAAACGACCTCATACCGTCATCCTCAGCACGCCGACGGCTCTGAAAGTGGATGGCATTCCGGCTTGGATTCATCACTCTCGCATCAAAAAGTCTAACAGAGTCCAACAAGAAACATAGCTCCCCAAGCCTGGGCCAGGTCCCTTAAAACTGCGCCTAAGTCAAGTGAAGCCATCAGATTAATTCTTTTTATTTACCTCTATTGTTTGTTTCCGCCTATTATGTCCTCTGCTCCATCCTACTCTTTCCTCCTCACTTCTTTCACGACGGGACGTGTGTCTACAAACACTACTTGGAAGGCAGGAACTTCCAAGGAAGTCTCTTTTGCAGTTGATTTATGTGCTTTGTTCCCAGAGCCTGCCCGTACCCATGAAGAACAACGCAATCTGCCGGTCATGGGAGTGGGGAGCGTCAACCTTGCTGCAGGATTTGGAAACTCTGGAAGCCAGACTGGATGTGGAAGCTCCAAAGGTACAGAAAAAGGACTCCAGAATGTTGACTTTTACCTCTGTCCTGGAAATCACCCTGACTCTAGTTGTCAAGATTCTTACCAGTTTTTCTGCCCTGACTGGACATGTGTAACTTTGGCCACCTACTCTGGGGGATCAAGCCAATCTTCTACCCTTTCCATAGCTTGTGCTTCCTGACCTAAACTGTGTACTAAGAGAAATTGTAATCCCCTTACTGTAACTGTCCATAACCCTAATTTAGCTCAATGGTATTACAGCATGTCATGGGGATTAAGGCTTTATATCCCAGGATTTGATGTCGGAACTATGTTCACTATCCAGAAGAAAATCCTGGTCTCATGGAGCCCTCCGAAGCCAATCGGGCCTGTAACTGATTTAGGTGACCCTATATTCCAAAAACATCCAGACAGGGTTGATTTAACTGTCCTGCCGCCATTCCTGGTTCCCAAACCTCAGCTGCAACGACAGTACCTCCAACCCAGCCTGATGTCCATTCTGGGCGGGTTATATCACCTTCTCAATCTCATCCAGCCTAGACTAGCCCAAGATTGTTGGTTGTGCCTAAAGGCCAAACCCCCATATTATGCTGGATTAGGAGTAGAAGCCGCATTTAAAATTGGCTCTCTTTCTTGTTGTACACGCCCCCTGCCCTCACATTAGGAGACATGTCGGGAAATGCTTCTTGTTTAATTAGCGCCGGATATAACTTGTCTCTTCTCCCTTTCAGGCTACCTGTAATCAGTCTCTACTTACTTCTTTAAGTGCCTCAGTCTCCTACTAGGCACCTAACAATACCTGGTTAGCCTGCACTTCAGGTCTCACACGCTGCATCAATGGGACTGAACCAGGACCTCTCCTGTGTGTTTTGGTTCATGTGCTCCCCCAGGTCTATGTGTATAGCGGGCCAGAAGCACAACTTCTCATTGCTCCCCCTGAATTACATTCCAGGTTTCGCCGA	T	20	PASS	ClusterIDs=HG2_10X_allpass_540:HG4_Ill_Krunchall_5130:HG4_10X_allpass_632:HG2_Ill_tnscope_365:HG4_PB_pbsv_3523:HG4_PB_SVrefine2PBcRDovetail_1822:HG4_PB_SVrefine2Falcon1Dovetail_2119:HG4_Ill_MetaSV_3434:HG3_PB_SVrefine2Falcon1Dovetail_2181:HG2_PB_SVrefine2PBcRplusDovetail_7512:HG2_PB_SVrefine2PB10Xhap12_2571:HG2_Ill_breakscan11_479:HG2_Ill_SpiralSDKrefine_11278:HG2_Ill_SVrefine2DISCOVARplusDovetail_8707:HG2_Ill_MetaSV_3292:HG2_10X_SVrefine210Xhap12_2607:HG2_PB_pbsv_3514;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2607:HG2_Ill_MetaSV_3292:HG2_Ill_SVrefine2DISCOVARplusDovetail_8707:HG2_Ill_SpiralSDKrefine_11278:HG2_Ill_breakscan11_479:HG2_PB_SVrefine2PB10Xhap12_2571:HG2_PB_SVrefine2PBcRplusDovetail_7512:HG3_PB_SVrefine2Falcon1Dovetail_2181:HG4_Ill_MetaSV_3434:HG4_PB_SVrefine2Falcon1Dovetail_2119:HG4_PB_SVrefine2PBcRDovetail_1822:HG4_PB_pbsv_3523;NumExactMatchSVs=12;ClusterMaxShiftDist=0.002292;ClusterMaxSizeDiff=0.002292;ClusterMaxEditDist=0.002292;PBcalls=7;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2182;DistBack=52149;DistForward=-2178;DistMin=-2178;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:101357566-101359747;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2557.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:59:29:./.:35:2:4:10:./.:0:0:0:0:0/1:51:16:0/1:169:71:2228:.:.
chr3	102810349	HG2_PB_pbsv_3521	TTAGTTTTATTTTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3293:HG3_Ill_Krunchall_4885:HG2_Ill_Krunchall_4936:HG4_PB_assemblyticsfalcon_17574:HG3_PB_assemblyticsfalcon_17880:HG2_PB_assemblyticsfalcon_17985:HG3_PB_HySA_5446:HG2_PB_HySA_6666:HG4_PB_SVrefine2Falcon1Dovetail_2127:HG3_PB_pbsv_3449:HG3_PB_SVrefine2PBcRDovetail_1612:HG3_PB_SVrefine2Falcon1Dovetail_2189:HG3_Ill_scalpel_3552:HG3_Ill_manta_780:HG3_Ill_SVrefine2DISCOVARDovetail_2664:HG3_Ill_MetaSV_3468:HG3_Ill_GATKHCSBGrefine_2372:HG3_10X_allpass_671:HG2_PB_pbsv_3521:HG2_PB_SVrefine2Falcon2Bionano_1621:HG2_PB_SVrefine2Falcon1plusDovetail_8124:HG2_Ill_manta_986:HG2_Ill_MetaSV_3294:HG2_Ill_GATKHCSBGrefine_2360:HG2_10X_allpass_541:HG2_10X_SVrefine210Xhap12_2609:HG2_Ill_tnscope_366;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2609:HG2_10X_allpass_541:HG2_Ill_GATKHCSBGrefine_2360:HG2_Ill_MetaSV_3294:HG2_Ill_manta_986:HG2_PB_SVrefine2Falcon1plusDovetail_8124:HG2_PB_SVrefine2Falcon2Bionano_1621:HG2_PB_pbsv_3521:HG3_10X_allpass_671:HG3_Ill_GATKHCSBGrefine_2372:HG3_Ill_MetaSV_3468:HG3_Ill_SVrefine2DISCOVARDovetail_2664:HG3_Ill_manta_780:HG3_Ill_scalpel_3552:HG3_PB_SVrefine2Falcon1Dovetail_2189:HG3_PB_SVrefine2PBcRDovetail_1612:HG3_PB_pbsv_3449:HG4_PB_SVrefine2Falcon1Dovetail_2127;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0940032;ClusterMaxSizeDiff=0.0940032;ClusterMaxEditDist=0.0940032;PBcalls=12;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=7818;DistForward=-300;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=3:102810350-102810678;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:0|1:34:3:0:28:./.:0:0:0:0:0/1:29:17:0/1:24:6:.:.:.
chr3	104278199	HG2_Ill_manta_989	AAAGGATATTTGCATTCTAGAACACAGAGAGAAAGCTGAAGTAAAACACAAAATCAGTTCCAGTGCTTACAGAATTTGGATTATAGAGTGTGATGGAATGCATTATATCTCTTCAAATTCATATGCTGAAACCCTAACCCTAAGTGGGACTGTACTTGTAAACAGGGCCTTTAAAAGAAGTAAGCACATTAAAGTGAAACTGGTAAGAGTGTGCCTTGATCCAATCTGATTGGTGTCCTTATAAGAAGTGGAAATTTGAACACACAAAGAGAAACATCAGGGGAGCTTACACACAGAGAAAATCCCATATAAGGACACAGCGAGAAAGCAGCCATGTGCAAGCTAAGGAAAGACTCCGAAGAAACCAAATGTGCTGACTCTTTGAGCTTGAACTTCTAGCCTCCAGAACTGTGTGTAAATCAATTTCTGTTATTTAAACCTCTATGTGGTATTTTGTAATGGCATGACCAGAAAACTAATACATAGATAAAATAACATTAAAAATAATCATCTTATAAGTGGTCAGTGGTAAAAATTTGTCAGCAACTTTTACCCACAATTAGACCTTTTAAAAAAATAATTTCAAAATCAGGGAAAAAATTCAGATTGATTAGTCCTCATGATTTTAAGGTTATCAGTGTCAGAACAAGGAAAGCAGGAGAATAGATAGTTATATAATGTAATAATTATAATGGCTGAGAAAAGTGAAAGACTAATTTTACTTGCTTATTCACATAAAATTTCTCAGAATGATAAAATAATGGTACTTTTATTGACAAAACTACAGAGAACTGCTATAATTGTTAAGTTACATGTGGCTACCTATATGTTACATTGGTTATCTATAT	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2191:HG3_PB_pbsv_3455:HG2_10X_allpass_542:HG3_PB_assemblyticsfalcon_17886:HG4_PB_assemblyticsfalcon_17590:HG4_PB_SVrefine2PBcRDovetail_1833:HG4_PB_SVrefine2Falcon1Dovetail_2134:HG4_Ill_manta_848:HG4_Ill_MetaSV_3441:HG4_Ill_GATKHCSBGrefine_2455:HG3_PB_SVrefine2PBcRDovetail_1618:HG3_Ill_manta_782:HG3_Ill_SVrefine2DISCOVARDovetail_2671:HG3_Ill_MetaSV_3471:HG3_Ill_GATKHCSBGrefine_2376:HG2_PB_assemblyticsPBcR_17364:HG2_PB_SVrefine2PBcRplusDovetail_7521:HG2_PB_SVrefine2PB10Xhap12_2583:HG2_Ill_manta_989:HG2_Ill_SpiralSDKrefine_11291:HG2_Ill_MetaSV_3298:HG2_Ill_GATKHCSBGrefine_2365:HG2_10X_SVrefine210Xhap12_2613:HG3_10X_allpass_673:HG4_Ill_Spiral_285:HG3_Ill_Spiral_3839:HG2_Ill_tnscope_367:HG2_Ill_Spiral_241:HG4_Ill_Krunchall_5158:HG3_Ill_Krunchall_4896:HG2_Ill_Krunchall_4948:HG2_PB_pbsv_3530:HG4_PB_pbsv_3542;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2613:HG2_Ill_GATKHCSBGrefine_2365:HG2_Ill_MetaSV_3298:HG2_Ill_SpiralSDKrefine_11291:HG2_Ill_manta_989:HG2_PB_SVrefine2PB10Xhap12_2583:HG2_PB_SVrefine2PBcRplusDovetail_7521:HG2_PB_assemblyticsPBcR_17364:HG3_Ill_GATKHCSBGrefine_2376:HG3_Ill_MetaSV_3471:HG3_Ill_SVrefine2DISCOVARDovetail_2671:HG3_Ill_manta_782:HG3_PB_SVrefine2PBcRDovetail_1618:HG4_Ill_GATKHCSBGrefine_2455:HG4_Ill_MetaSV_3441:HG4_Ill_manta_848:HG4_PB_SVrefine2Falcon1Dovetail_2134:HG4_PB_SVrefine2PBcRDovetail_1833:HG4_PB_assemblyticsfalcon_17590;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0261128;ClusterMaxSizeDiff=0.0261128;ClusterMaxEditDist=0.0261128;PBcalls=12;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-847;DistBack=97538;DistForward=-847;DistMin=-847;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:104278200-104279047;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2559.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:48:52:./.:13:25:24:10:./.:0:0:0:0:0/1:64:13:0/1:69:27:.:.:.
chr3	104999610	HG2_10X_SVrefine210Xhap12_2615	GTATACACACATATGTATATATGTGTGTGTATATATATACATATGTGTGTATGTATATATACGCACATATATATACATATGTGTGTATATATACACACACATATATATACATATGTGTGTGTATATA	G	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3442:HG4_PB_assemblyticsfalcon_17593:HG3_PB_assemblyticsfalcon_17889:HG2_PB_assemblyticsfalcon_17996:HG2_PB_assemblyticsPBcR_17367:HG4_PB_pbsv_3546:HG2_PB_pbsv_3534:HG3_PB_pbsv_3458:HG4_PB_SVrefine2PBcRDovetail_1836:HG4_PB_SVrefine2Falcon1Dovetail_2137:HG4_Ill_SVrefine2DISCOVARDovetail_2683:HG4_Ill_GATKHCSBGrefine_2458:HG3_PB_SVrefine2PBcRDovetail_1620:HG3_PB_SVrefine2Falcon1Dovetail_2195:HG3_Ill_SVrefine2DISCOVARDovetail_2674:HG3_Ill_GATKHCSBGrefine_2380:HG2_PB_SVrefine2PBcRplusDovetail_7524:HG2_PB_SVrefine2PB10Xhap12_2586:HG2_PB_SVrefine2Falcon2Bionano_1628:HG2_PB_SVrefine2Falcon1plusDovetail_8133:HG2_Ill_SVrefine2DISCOVARplusDovetail_8724:HG2_Ill_GATKHCSBGrefine_2368:HG2_10X_SVrefine210Xhap12_2615:HG3_PB_HySA_5452:HG2_PB_HySA_6685:HG4_Ill_manta_850:HG4_CG_vcfBeta_2363:HG3_Ill_manta_784:HG2_Ill_manta_992:HG2_Ill_SpiralSDKrefine_11293:HG4_Ill_Spiral_287:HG3_Ill_Spiral_3843:HG2_Ill_Spiral_243:HG3_Ill_Krunchall_4899:HG4_Ill_Krunchall_5163:HG2_Ill_Krunchall_4952:HG2_PB_SVrefine2Falcon1plusDovetail_8132:HG4_Ill_svaba_4516:HG4_Ill_scalpel_3356:HG4_Ill_250bpfermikitraw_4951:HG4_Ill_150bpfermikitraw_4700:HG4_10X_allpass_635:HG3_Ill_svaba_4522:HG3_Ill_scalpel_3561:HG3_Ill_MetaSV_3472:HG3_10X_allpass_675:HG2_Ill_svaba_4424:HG2_Ill_scalpel_3452:HG2_Ill_MetaSV_3299;NumClusterSVs=49;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2615:HG2_Ill_GATKHCSBGrefine_2368:HG2_Ill_SVrefine2DISCOVARplusDovetail_8724:HG2_PB_SVrefine2Falcon1plusDovetail_8133:HG2_PB_SVrefine2Falcon2Bionano_1628:HG2_PB_SVrefine2PB10Xhap12_2586:HG2_PB_SVrefine2PBcRplusDovetail_7524:HG3_Ill_GATKHCSBGrefine_2380:HG3_Ill_SVrefine2DISCOVARDovetail_2674:HG3_PB_SVrefine2Falcon1Dovetail_2195:HG3_PB_SVrefine2PBcRDovetail_1620:HG4_Ill_GATKHCSBGrefine_2458:HG4_Ill_SVrefine2DISCOVARDovetail_2683:HG4_PB_SVrefine2Falcon1Dovetail_2137:HG4_PB_SVrefine2PBcRDovetail_1836;NumExactMatchSVs=15;ClusterMaxShiftDist=0.046875;ClusterMaxSizeDiff=0.046875;ClusterMaxEditDist=0.046875;PBcalls=18;Illcalls=27;TenXcalls=3;CGcalls=1;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=16;NumTechs=4;NumTechsExact=3;SVLEN=-126;DistBack=6630;DistForward=-124;DistMin=-124;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=24;REFWIDENED=3:104999605-104999754;PctSeqSimilarity=0.9825;PctSizeSimilarity=0.9844;PctRecOverlap=0.938;SizeDiff=-2;StartDistance=8;EndDistance=6;GTMatch=0;TruScore=96;MatchId=2560.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:69:1/1:4:30:0:32:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr3	105793098	HG3_Ill_Krunchall_4905	CCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_3460:HG2_PB_assemblyticsfalcon_18001:HG3_Ill_GATKHC_5893:HG3_Ill_GATKHCSBGrefine_2383:HG2_Ill_GATKHC_5815:HG2_PB_assemblyticsPBcR_17372:HG2_PB_pbsv_3536:HG4_PB_pbsv_3548:HG4_Ill_150bpfermikitraw_4707:HG3_Ill_Krunchall_4905:HG2_Ill_Krunchall_4958:HG2_Ill_150bpfermikitraw_4527;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4527:HG2_Ill_Krunchall_4958:HG3_Ill_Krunchall_4905:HG4_Ill_150bpfermikitraw_4707:HG4_PB_pbsv_3548;NumExactMatchSVs=5;ClusterMaxShiftDist=0.17931;ClusterMaxSizeDiff=0.17931;ClusterMaxEditDist=0.194444;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-77;DistBack=-165;DistForward=-32;DistMin=-165;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=114;REFWIDENED=3:105793012-105793202;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:33:1/1:0:12:2:8:./.:0:0:0:0:1/1:0:12:./.:.:.:.:.:.
chr3	106813625	HG2_Ill_SVrefine2DISCOVARplusDovetail_8729	AGTTTTTTTTTTTTCTTTTTTTTGTTGTTGTTTTTTTTGTTTTTTTTTTTGTTTTGTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_3556:HG4_PB_HySA_5302:HG3_PB_assemblyticsfalcon_17904:HG2_PB_assemblyticsfalcon_18010:HG2_PB_assemblyticsPBcR_17380:HG4_PB_assemblyticsfalcon_17608:HG4_Ill_Krunchall_5186:HG3_Ill_Krunchall_4919:HG2_Ill_Krunchall_4968:HG2_Ill_MetaSV_3300:HG4_PB_SVrefine2Falcon1Dovetail_2140:HG4_Ill_scalpel_3373:HG4_Ill_manta_855:HG4_Ill_SVrefine2DISCOVARDovetail_2689:HG4_Ill_GATKHCSBGrefine_2466:HG4_CG_vcfBeta_2375:HG4_10X_allpass_636:HG3_PB_pbsv_3466:HG3_PB_SVrefine2PBcRDovetail_1624:HG3_PB_SVrefine2Falcon1Dovetail_2200:HG3_Ill_scalpel_3574:HG3_Ill_manta_787:HG3_Ill_SVrefine2DISCOVARDovetail_2681:HG3_Ill_MetaSV_3474:HG3_Ill_GATKHCSBGrefine_2388:HG3_CG_vcfBeta_2047:HG3_10X_allpass_676:HG2_PB_pbsv_3542:HG2_PB_SVrefine2PBcRplusDovetail_7527:HG2_PB_SVrefine2PB10Xhap12_2590:HG2_PB_SVrefine2Falcon2Bionano_1633:HG2_PB_SVrefine2Falcon1plusDovetail_8137:HG2_Ill_scalpel_3464:HG2_Ill_manta_995:HG2_Ill_SVrefine2DISCOVARplusDovetail_8729:HG2_Ill_GATKHCSBGrefine_2374:HG2_10X_allpass_544:HG2_10X_SVrefine210Xhap12_2619:HG2_Ill_breakscan11_480;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2619:HG2_10X_allpass_544:HG2_Ill_GATKHCSBGrefine_2374:HG2_Ill_SVrefine2DISCOVARplusDovetail_8729:HG2_Ill_manta_995:HG2_Ill_scalpel_3464:HG2_PB_SVrefine2Falcon1plusDovetail_8137:HG2_PB_SVrefine2Falcon2Bionano_1633:HG2_PB_SVrefine2PB10Xhap12_2590:HG2_PB_SVrefine2PBcRplusDovetail_7527:HG2_PB_pbsv_3542:HG3_10X_allpass_676:HG3_CG_vcfBeta_2047:HG3_Ill_GATKHCSBGrefine_2388:HG3_Ill_MetaSV_3474:HG3_Ill_SVrefine2DISCOVARDovetail_2681:HG3_Ill_manta_787:HG3_Ill_scalpel_3574:HG3_PB_SVrefine2Falcon1Dovetail_2200:HG3_PB_SVrefine2PBcRDovetail_1624:HG3_PB_pbsv_3466:HG4_10X_allpass_636:HG4_CG_vcfBeta_2375:HG4_Ill_GATKHCSBGrefine_2466:HG4_Ill_SVrefine2DISCOVARDovetail_2689:HG4_Ill_manta_855:HG4_Ill_scalpel_3373:HG4_PB_SVrefine2Falcon1Dovetail_2140;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0676923;ClusterMaxSizeDiff=0.0676923;ClusterMaxEditDist=0.0676923;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=2;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=2;HG2count=16;HG3count=12;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-164;DistBack=77393;DistForward=-159;DistMin=-159;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=3:106813626-106813795;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2562.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:67:1/1:0:29:2:15:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr3	109489074	HG2_Ill_MetaSV_3303	TAAATGTGAAATACCACATAAAGAATAAAAAAAAACACATGATCATCTCAATATATGAAGAAAAAACATTTGACAAAATCCAGCATCTCTTTATAACAACTCTCAGCAAAATCAGCATAGACAGGATGTACCTTAATGTAATAAATGCCATCTATGACAAACCCACAGCCAACATAATACTGAATGAGGAAAAGTTGAAAGCATTCCCCCTGAGAACTGGAACAAGACAACAATGCTCACTTTCACCATTTCTATTC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2206:HG2_PB_SVrefine2PB10Xhap12_2601:HG2_PB_PB10Xdip_19833:HG4_Ill_Krunchall_5212:HG4_Ill_Spiral_288:HG4_Ill_MetaSV_3447:HG2_Ill_tnscope_368:HG2_Ill_Spiral_244:HG4_Ill_svaba_4564:HG4_Ill_scalpel_3393:HG4_Ill_manta_859:HG4_Ill_GATKHCSBGrefine_2473:HG2_PB_pbsv_3549:HG2_PB_SVrefine2PB10Xhap12_2600:HG2_PB_HySA_6723:HG2_Ill_svaba_4459:HG2_Ill_manta_1000:HG2_Ill_breakscan11_483:HG2_Ill_SpiralSDKrefine_11316:HG2_Ill_MetaSV_3303:HG2_Ill_GATKHCSBGrefine_2382:HG2_10X_allpass_545:HG2_10X_SVrefine210Xhap12_2628:HG4_PB_pbsv_3568:HG4_PB_HySA_5320:HG3_PB_assemblyticsfalcon_17924;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2628:HG2_10X_allpass_545:HG2_Ill_GATKHCSBGrefine_2382:HG2_Ill_MetaSV_3303:HG2_Ill_SpiralSDKrefine_11316:HG2_Ill_breakscan11_483:HG2_Ill_manta_1000:HG2_Ill_svaba_4459:HG2_PB_HySA_6723:HG2_PB_SVrefine2PB10Xhap12_2600:HG2_PB_pbsv_3549:HG4_Ill_GATKHCSBGrefine_2473:HG4_Ill_manta_859:HG4_Ill_scalpel_3393:HG4_Ill_svaba_4564;NumExactMatchSVs=15;ClusterMaxShiftDist=0.253112;ClusterMaxSizeDiff=0.253112;ClusterMaxEditDist=0.253112;PBcalls=9;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-256;DistBack=45533;DistForward=19476;DistMin=19476;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:109489075-109489333;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2564.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:0|1:29:2:2:22:./.:0:0:0:0:0/1:47:24:./.:.:.:.:.:.
chr3	109508807	HG4_Ill_150bpfermikitraw_4746	CTCTCTATATATATATATACACACATATATGTGTGTATATATATATATGTA	C	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_17628:HG3_PB_HySA_5492:HG3_PB_assemblyticsfalcon_17925:HG4_Ill_GATKHC_5956:HG4_Ill_GATKHCSBGrefine_2474:HG3_Ill_GATKHC_5926:HG3_Ill_GATKHCSBGrefine_2394:HG2_Ill_GATKHC_5853:HG2_Ill_GATKHCSBGrefine_2383:HG2_PB_assemblyticsfalcon_18032:HG2_Ill_SpiralSDKrefine_11317:HG4_Ill_manta_860:HG3_Ill_manta_791:HG2_Ill_manta_1001:HG4_PB_HySA_5321:HG4_Ill_scalpel_3394:HG4_Ill_Krunchall_5213:HG4_Ill_250bpfermikitraw_5000:HG4_Ill_150bpfermikitraw_4746:HG3_Ill_scalpel_3587:HG3_Ill_Krunchall_4940:HG2_Ill_scalpel_3480:HG2_Ill_Krunchall_4991:HG2_Ill_250bpfermikitraw_4907:HG2_Ill_150bpfermikitraw_4555;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4555:HG2_Ill_250bpfermikitraw_4907:HG2_Ill_Krunchall_4991:HG2_Ill_scalpel_3480:HG3_Ill_Krunchall_4940:HG3_Ill_scalpel_3587:HG4_Ill_150bpfermikitraw_4746:HG4_Ill_250bpfermikitraw_5000:HG4_Ill_Krunchall_5213:HG4_Ill_scalpel_3394;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0816327;ClusterMaxEditDist=0.122449;PBcalls=5;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=-39;DistForward=27082;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:109508806-109508859;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:37:./.:25:10:3:21:./.:0:0:0:0:0/1:25:23:./.:.:.:.:.:.
chr3	110256973	HG2_Ill_manta_1002	ACGCTTTATACAATTGTAGTAAATTTCTGGGCCATACAAATTAAAATATACTTTGAAGGTAGGTACTCAATGGAAGATAGATTTTTTTTTTTGTTCTTCACAATAATGTATCTTTTTTTTTAAAATCTACTACTACAAACACTTTAAACAGGACTTTCCATAAGTGCTATTCCCTTTAAAAAATTGGAAGGATCATTTACATTACTATTTCAAGCAAGTAAAGGGTGCAGGAAAATAGCTTGATTACATCCACTTGTCCTAACTTTTAACAAACTAGCTGTATG	GT	20	PASS	ClusterIDs=HG2_Ill_Krunchall_5003:HG4_Ill_GATKHCSBGrefine_2475:HG2_Ill_GATKHCSBGrefine_2384:HG2_Ill_SpiralSDKrefine_11323:HG4_PB_assemblyticsfalcon_17634:HG4_PB_SVrefine2Falcon1Dovetail_2147:HG4_Ill_manta_862:HG4_Ill_SVrefine2DISCOVARDovetail_2700:HG3_PB_assemblyticsfalcon_17930:HG3_PB_SVrefine2Falcon1Dovetail_2208:HG2_PB_SVrefine2Falcon2Bionano_1638:HG2_Ill_manta_1002:HG2_10X_SVrefine210Xhap12_2631:HG4_Ill_MetaSV_3448:HG2_Ill_MetaSV_3304:HG4_Ill_Spiral_290:HG2_Ill_Spiral_245:HG4_10X_allpass_637:HG4_Ill_svaba_4573:HG2_Ill_svaba_4469:HG4_PB_HySA_5329:HG4_PB_pbsv_3570:HG2_PB_pbsv_3550:HG4_Ill_Krunchall_5221;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2631:HG2_Ill_manta_1002:HG2_PB_SVrefine2Falcon2Bionano_1638:HG3_PB_SVrefine2Falcon1Dovetail_2208:HG3_PB_assemblyticsfalcon_17930:HG4_Ill_SVrefine2DISCOVARDovetail_2700:HG4_Ill_manta_862:HG4_PB_SVrefine2Falcon1Dovetail_2147:HG4_PB_assemblyticsfalcon_17634;NumExactMatchSVs=9;ClusterMaxShiftDist=0.064982;ClusterMaxSizeDiff=0.064982;ClusterMaxEditDist=0.195298;PBcalls=8;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-282;DistBack=36455;DistForward=-284;DistMin=-284;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:110256973-110257256;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9965;PctRecOverlap=0.9965;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=2566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:39:0|1:46:1:0:36:./.:0:0:0:0:0/1:37:20:./.:.:.:.:.:.
chr3	112467382	HG3_10X_allpass_678	AGGGAAGGTAAATATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTAGCCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2639:HG3_Ill_Krunchall_4965:HG2_Ill_Krunchall_5015:HG2_PB_assemblyticsPBcR_17425:HG2_Ill_Krunchall_5014:HG4_PB_assemblyticsfalcon_17649:HG3_PB_assemblyticsfalcon_17942:HG2_PB_assemblyticsfalcon_18053:HG4_Ill_Spiral_294:HG2_Ill_Spiral_247:HG4_PB_pbsv_3579:HG2_PB_pbsv_3557:HG3_PB_pbsv_3481:HG4_Ill_MetaSV_3451:HG3_PB_HySA_5520:HG3_Ill_MetaSV_3477:HG2_PB_HySA_6750:HG2_Ill_tnscope_369:HG2_Ill_MetaSV_3306:HG4_Ill_manta_866:HG4_Ill_GATKHCSBGrefine_2480:HG4_10X_allpass_638:HG3_Ill_scalpel_3606:HG3_Ill_manta_796:HG3_Ill_GATKHCSBGrefine_2399:HG3_10X_allpass_678:HG2_Ill_scalpel_3496:HG2_Ill_manta_1006:HG2_Ill_breakscan11_484:HG2_Ill_GATKHCSBGrefine_2388:HG2_10X_allpass_547:HG4_PB_SVrefine2Falcon1Dovetail_2153:HG4_Ill_SVrefine2DISCOVARDovetail_2704:HG3_PB_SVrefine2PBcRDovetail_1631:HG3_PB_SVrefine2Falcon1Dovetail_2212:HG3_Ill_SVrefine2DISCOVARDovetail_2702:HG2_PB_SVrefine2PBcRplusDovetail_7537:HG2_PB_SVrefine2PB10Xhap12_2606:HG2_PB_SVrefine2Falcon2Bionano_1644:HG2_PB_SVrefine2Falcon1plusDovetail_8145:HG2_Ill_SVrefine2DISCOVARplusDovetail_8740;NumClusterSVs=41;ExactMatchIDs=HG2_10X_allpass_547:HG2_Ill_GATKHCSBGrefine_2388:HG2_Ill_breakscan11_484:HG2_Ill_manta_1006:HG2_Ill_scalpel_3496:HG3_10X_allpass_678:HG3_Ill_GATKHCSBGrefine_2399:HG3_Ill_manta_796:HG3_Ill_scalpel_3606:HG4_10X_allpass_638:HG4_Ill_GATKHCSBGrefine_2480:HG4_Ill_manta_866;NumExactMatchSVs=12;ClusterMaxShiftDist=0.160377;ClusterMaxSizeDiff=0.160377;ClusterMaxEditDist=0.160377;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-330;DistBack=13872;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=3:112467376-112467731;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2567.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:73:1/1:1:28:3:36:./.:0:0:0:0:1/1:0:46:./.:1:16:.:.:.
chr3	112743115	HG2_PB_SVrefine2PBcRplusDovetail_7538	CCACCAGCCTGTAGGGGTGGGTTGCCCCTACACACCTGTGGGTGTTTCTCGTAAGGTGGGACGAGAGATTTGGAAAAGAAAAAGACACAGAGACAAAGTATAGAGAAAGAAATAAGGGGACCCGGGGAACCAGCGTTCAGCATATGGAGGATCCCGCCAGCCTCTGAGTTCCCTTAGTATTTATTGATCATCTGTGGGTGTTTCTCGAAGAGGGGGATGTGTCAGGGTCACAAGACAATTGTGGGGAGAGGGTCAGCAGACAAACACGTGAACAAAGGTCTTTGCATCATAGACAATGTAAAGGATTAAGTGCTGTGCTTTTAGATATGCATACACATAAACATCTCAATGCTTTACAAAGCAGTATTGCTGCCCGCAGGTCCCACCTCCAGCCGTAAGGCGGTTTTTCCCTATCTCAGTAGATGGAGCATACAATCGGGTTTTATACCGAGACATTCCATTGCCCAGGGACAGGCAGGAGACAGATGCCTTCCTCTTGTCTCAACTGCAAGAGGCATTCCTTCCTCTTTTACTAATCCTCCTCAGCACAGACCCTTTACGGGTGTCGGGCTGGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCGGCCTTCCGCAGTTTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACTCTGAGTTGACACAGCACATGTTTCAGAGAGCACGGGGTTGGGGGTAAGGTCACAGAATCTCAAGGCAGAAGAATTTTTCTTAGTACATAACAAAATGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTGCTTTTCCCCACATTTCCCCCTTTTCTTTTCGACAAAACCACCGTCGTCATCATGGCCCGTTCTCGATGGTCGCTGCCTCTTCGGAGCTGTTGGGTACACCTGCAGACTAACAACTGACAAAACAGGCACACAAGGATTAATATGAAATTTATAATCGTAGTACTTCCAATGGTCTTAACCCAAGTGACAGGGTTAAGATTTGCGAGGCCAACAGCAACTCCTGCAATTGCCTCAGTTCCTGGCACCAAATTTAAATGGGCTTTAGATGCTTCGAAAATTTGTTCTTTTAATTTGGAAATGTCTAAAGTGAGATTATCTTCTCTTCCCTGTAGATGGCGTCTAACCATGTCCCAGTGATGCTCAGACTCATTATAAATTTGGGGTGTAATACAAAAATCTGACGTATTCCAGTCACACTGTAACTGGAAAAGATGTTCTAAGCTCATGAGTCTGTCTCCCATCCAAATGACAGTTTGTCTAAGATCAATTAATTTGATTTGCCAATTTTTGATCAATACTAGATTGTGAATTCCACAATCTTGTAGAATTCTTTTGCCAATCATTAACAAAGTTTACTGACTGAACAGAAGAGTGCAATGCAACTCCTGCTACAGCAGCCGTAGCTGTGACTGCAATTAATCCCATAATCACTGCAATTAAAGTAAAAATGAATCTTTTGGATCTATTTAAAACACCTTTTAATACTTCAGTTAAAATATGGACGGATAGTGAGGCCTCCCACGGTCGGTCCATGGACACAGGGATCCACACGCCCTCTCTTGCTCTCACCAGCAGAATACGGTGTTGCCAATTAAAAGTTGAATCAATGCAAGTAAGCAATCTCCAATTTTCACAGGTTATAGTCTGGGAGTCTGGTTTAATAACTATATTTCCTACAACTAGCATATAAGGGGGCTTTACGCAACTTTGTAAAGGAACTGTTAGACTGGAATTTAGGTCAACAGTATAAAATGGCTTACGATCTCTTGTTTCTAAAGTTTGATTTCCAGACCAAATTCTAATGTGGTGTGAGGCCACAGTAAGCCTCCATAATTCTGGATGTTCAGGACCAGAAACAGGACTTATTATTTTTGGTCTTGGGGTAGAGATTCCTTTTTCTCCCCATTCCCAAGGGTAGAAAGACTGCAATTTTTTATGCTTATGTTTGTCTAAACTTTCTGTTAAGTCGCTATCAACAGCTGGACTCACTTGTGCACTTGGACACGACTGAGTTTGTCCTGAGCAATTGTGGTAGAATTGACCTCGAGGTGCCCAATCTATAATAGTTCCGAATTCATTGTTTTGTAATATCACCGCACTATTGGCCACACATTCTTCCCAAACTAAAACTTCTGTATTTTTTGATTCTTTGGGAATTTCCTTGGGGCAAGGTTTCCCTTTAGGTCTAAATTTTAATGATCTTTGATAAGAAAAGTCTTGTAAATAATTTACCCGTGGCCTAAGTGACATCCCGCTTACCATGTGATAAGTGAATCTACTGATGGGACTGACAGTAGGTACTTCTACCAACCAATTTTGGACTGCAGGCATTAAACATCCTGGTGCTCTCCCTAGGCAAATAGGAGGATAACGATACCCAATGGAAATATTTATCATCATCCCTTCTTCCTCAGGTTTGGCAGGGCAGCGATCATCTGTGGGGCCAGGTACCCATTCGCTATCATTAACATATACTTCTATAGGATTATCCATCCATGTGACTGGTGTTACCATCTCCGTGGAGGCCCTTTTCTTTGCATCTCCGATGGGTTCATTGTAGAACTTCAAATGTCTAGTGGGTATCCAAACAGGAAGCTGATTTTCTCCTGGTGAAACACAAGCAAAACCTCTCCCCCACGTTATCACCTTCCCTATTTCCCATGTCTTATTTTTATTATCTTTCCACCAAATTAGTTTTCCTTCATGTGGGCTGTTCTTTTTACCAGTAAGATGTTGTTCTGCAGAAGTAGTAGTCTGATTTCTATAAATGTTTAAAAAATTTAAAGTATAGAGTGCTAGATTAAGTTGCATCTGAGGAGTGGTACACTCCTTACTGTCTCCCCCTTCTTTTTGTTTAACTAATTGAGTTTTGAGTGTTCTATTAGTTCTTTCAACTATGGCCTGTCCTTGGGAATTATAAGGAATTCCTGTTGTATGTGAAATTTTCCACTGACTTAAGAATTTTTGGAAAGCTTTACTACAATATCCTGGTCCATTGCCAGTTTTGATTTTTTCTGGAACTCCCATTATAGCAAAACAATAAATGTTTTTTAACATGGGAAGTACTTTCTCCTGTTTGGCAAGTTGCCCATATGAAATGTGAATAAGTATCAACTGTTACATGAACATATGATAATCTTCCAAATGAAGGTACATGCGTGACATGCATTTGCCATAATGCATTAGGACACAGACCTCTGGGATTAACTCCTGCCTCTTGAGTGGGCAGGTGTAAGACTTGACACTGGGTGCAATGTTGTACAATATCTTTTGCCTGTTTCCATGTGACATCAAATTTGTTTTTTAATCCTGCTGCATTTACATGAGTCAAAGCATGAAGTTCTTGTGCTTTTATGAGTGCAGATGATACCAGTAAGTCAGCTTCTTCATTTGCTTTAGTCAAAGGCCCTGGTAAATTAGTGTGTGCTCGAATATGAGTAATATAAAATGGGAAATTTCTTTTTCTTACAGTTTGTTGTAATAAATTGAATAGCTGGTTTAACTGATCATCCATGCTATATTTAATTAGAGCTGTCTCAACATCCCTTGTAGCCTGTACTACATATGCAGAATCTGATATAATATTGATAGGTTGGTCAAAATCTTGTAACACTGTAATGACTGCAACCAACTCTGCTCTTTGAGCTGATTGATATGGAGTTTTGATTACTCGTTCTTTCGGCCCTGTGTAAGCTGCTTTTCCATTGCTGGAACCATCAGTAAATACTGTTAGAGCATTTTCTAAAGGTTCACGTCTGGTAATTTTAGGTAGAATCCAAGTAGTCAGTTTTAAGAACTGGAAGATCTTTGTTTTTGGGTAATGATTATCAATAATTCCCACAAAATTAGCAAGACCAATCTGCCATGCACCAGAATTGATAAAGGCTTGTCTAACTTGTTCCTTGGTTAAAGGGACAACTATTTTGTCTGGGTCATTTCCACATAATTTTATTATTCGTAATCTTGTCTGACCGATTAATGTAGCTATTTGATCCAAGTACAATGTAAAAGTCTTAACTGTACTGTGAGGAAGGAATGACCACTCCACAAGATCAGTATTTTGAATAATGATGCCTGTTGGAGAATGTGCAGTGGCAAAAATCAAAAGTTGGAGTGGGGCTAAGGGATCTATTCTATTTATTTGCGCTGACTGAATTTTTTCTTCCACTAATTTAATTTCTTTTGTTGCCTCTGGGGTTAACATTCTTTTACTATTTAAGTCTGAGTCTCCTCTTAAGATAGAGAACAAATTTGACATGGCATAAGTAGGAATGCCTAGAGTTGGCCAAATCCAATTAATATCTCCTAGTAATTTTTGAAAATCATTTAGTGTTTTTAATGTGTCTTTTCTTATTTCTATTTTTTGTGGCTTAATTTTTCTATTTTCTATCTGCATCCCTAAATAATGAAAAGGAGTAGAGGTTTGGATCTTATCAGATGCTATTGCCAGTCCAGCATTGGCAACCTCTGCTTGCAGAAATGTATAACAGTCAATTAATTTATCTTTCGTTTCTGCAGCACATAAAATATCATCAATATAATGAATAATATAACAGTCTGAAAACTTTTCTCTAACTGGTTGAAGAGCTCGACCTACAAAAGTCTGACAAATAGTTGGACTATTAAGCATTCCCTGAGGTAACACTTTCCACTGAAACCTGGTGGCTGGTTCTTTATTATTTATGGCTGGTATAGTAAAGGCAAATTTTTCACAATCCTGCTCTGCCAGAGGGATGGTAAAAAAGCAATCCTTTAGATCAATTATAATTAAAGGCCAATCTTTTGGGATCATGGCCGGAGAGGGCAACCCGGGTTGGAGAGGCCCCATGGGTTGAATTACGGCGTTTACGGCCCTTAAGTTAGTTAACATACGCCATTTGCCTGATTTCTTCTGAATTACAAACACAGGAGAATTCCAAGGCGAGGATGAAGGCTCAATATGACCCTTTTCTAACTGTTCATTTGCTAATAAATGTAAAGCCTCCAGTTTTTGTTTTGGTAGCGGACACTGATTTACCCACACCGGTTTTTCTGTTTTCCAAGTTAATGGTATGGGTTTAGGAGGCTCTACAGTGGCCGCCCCTAAAAAGGATACCCTATTCCTTCTCTTTTTTGATTTATTTTAGCCTCAACTGGAACTTTAATGCCATCTTCATTTTTCCCTAGTCCCTTTCCTGGTATATATCCCATCTTGGTCATGATTTTTTGACTCGTGGGGCTATATAATGGAGCGGGCATGGTGATTTCCGCACCCCCTTGTTGTAATAAATCTCGACCCCACAGATTAAGAGGAATTTAAGTAATCATTGGCTGAACAGTACTTTCTTGATTATCTGGCCCTAAGCAATGTAAAATCTCCATACTTTGATACACTTCTGAGGCTGTGCCTATGCCGACAAGTCCTGTAACAGCCTTTTGTTTAGGCCAATTTTTTGGCCACTGATTTAAAGCAATGATAGAGACATCTGCTCCAGTGTCTACCAACCCTTCAAACTGTTTTCCTTGAATAATGGCCTTACACACAGGTCTGTTCTCTGAGACCTGACTTGCCCAATATGCAGCCTTTCCTGTTGGATCAGTGCTTCCAAGCCCTCCTATTCTTTTTATTTCACTATTTCCACCCTTAATATATGGCAGGAGTAATAATTGAGCAATCCTGTCTCCTGGACTGGCACTCCAAGGAACTGAAGAGCTAATAACCAATTGAATTTCGCCTTTATAGTCTGAATCAACCACACTAGTATGAATTTGAACTCCTTTTAGATTTAGACTTGATCTTCCCAAGATTAGTCCTACAGTCCCCTCAGGCAGGGGGCCATATACCCCTGTGGGGATTTTTTGTGGGGGCTCCCCTGGAAGCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCTTGTGGGGGGGACAATTGTTGTATTGTGGTAACTGGCTTATTCCCTGAAACACTTGGGACAGTGGGGGTTGTTGTCCCTGAAAACCCTGAGGAACAAATGGCTGAATTGGGAATGCCCCAGTTTGTTGTGGGGCCTGAGGCTGGCCCCTTTGCTCGTTTCCCGACAATGGTTGCCCATTTTTATCAAATTTAGAACGACATTGACTAGCCCAATGTTTTCCTTTTTTACATCTTGGACATAAGTCAGGTGGCTCTCTACCTGTTGTAGTTGCTTGAATAGTTATATTCTGTTTATTTAAGACTGGGCAATTCTTTTTTAAGTGACCAATTTGACCACAATTATAACATTTTCCTCCAAATGTTCTAACTTGTCCTCCTAAAACAACTCCTGTTATTGCTTGAGCCATAAGCATAGCTTTATGCATAGCTCCTCCGATTCCATCACAGGCTTTTACATATTCTGAGATTACATCTGATCCTGCAGGAACCTTTCCTTTTAATGGCTTAATGGCTGATTGACACTCAGGATTGGCGTTTTCATATGCCATTAACTCCACTATGACCTTACGGGCTTTTTCATCGGCAATTGACTTTTGAGCAACATCTTGGAGCCTTGCCACAAAATCAGGATAGGGCTCTTTTGAACCTTGTCTTACTGTATTAAATGAGGGGCAGGTACTTCCTGGGTCTTGGATTTTTTCCCAGGCTCTAAGGCAGATAGCTCTAACTTGCTCAATGGCCTCATTTTGCATTAATGCTTGTTGACTAATAGTACTCCAATTTTGACCTATTCCTAATAGTTGATCTGCATCTATGTTAACTGGAGGATTGGCAGCCCTATTTCTTCGGACCTGTTCTTGTACCCCATCAATCCACCAAGTCTTAAATTGTAAAAATTGAGAGGGTGAGAGAGACGATTTTGCCAGAATCTCCCAATCATAAGGAATGAGTTTATGTCCATGAGCAATGGAATCTAATAATGTCCTCATATAAGGGGAGTTGGGTCCATACTGTTTTACTCCCTCTTTCATATCTTTTAGCATTTTTATCGAAAAAGACTTGTATCTGGCCTCAACTGTGGGAGGCTCTCCCTCTTGGGCTCCTTCTCCAGGTGGCATCGGTTCTAACGTTACTGGGAATTGCCATGCCTCAGTATCTCCTTCCTTTCTTGATTTATCAATAATTTCATGTAATTCACTACCCCGTCTACTAGGTGGTGCCGTAGGATTAAGTCTCCTAGTGGGTGGCTGAGGGTATGGCGCCCTGCCCTGTGGTGCTGGGGGCATTCCTGGATATCCATACTGACTTTCTGGGGGTGGCCGATACTGAAGTTCAGCCGGCGGCCAGTATTGATAGGCTACTGGCGGTTGGGTCTTATTTTCTTTAACCTGCTTTTGAGGTTGTAATGTTACGGGCACCTGACCTGCTGGAAGATGACTTGTGCCTCGTGGTTTAGACTCTGATGGCCCCACTAATTCTGGACCTTTTCCTTCCAATTTTAACGTTTCAGGATATATCACCTCCTGTAATTGATTATAGTCAACATTTTGCGTTGACTGAGCCATTACCGGCTCTGCTACATATTCGCAATGTAAACCTTCCGTTTCTTTCTGGGATTTTTTCCTTGTGTTTTCATTACAATCTATTATACAGCTTCCAAGGGCATCAGAAACTGAAACACTATCTTCTTCTGTTTGAAATGGTTCTAAAGCTGCTTTAATAATGGCCCAATCATTCCATACTGTAAGTGGAATGACATTACCCTTCCTACCTGCTTGTTTTAGTTCCTTACCAATTCTTTTCCAATCTTTTAGATCTAAAGTTCCTTGTTCTGGAAACCATGGGCAAAATTGTTCTATTATTTGAAATAGCTTGATTAGATTTTTTGTAGATACTTTAACTCCCCCTCTTTTTAAAAGAATTTTAATAAAGCTGAGATAAGAGGCATATTTACTTTTAATTTTACTTTTAGTTTGCCCCATTATCACCCTAGCTTCTTCCGAGCGCACAAGCTTACCGTAAGGCTGACTGTAGACGTACTCGGGATCTCTCGTCGACTTGTCCTCAATGACCACGCTCGAGCGTACCTTCACCCTAGAGAAAAGCCTCCACGTTGGG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8146:HG3_PB_pbsv_3483:HG2_PB_pbsv_3558:HG3_PB_pbsv_3482:HG4_PB_SVrefine2Falcon1Dovetail_2154:HG3_PB_SVrefine2Falcon1Dovetail_2213:HG2_PB_SVrefine2PBcRplusDovetail_7538:HG2_PB_SVrefine2PB10Xhap12_2607:HG2_PB_SVrefine2Falcon2Bionano_1645;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8146:HG4_PB_SVrefine2Falcon1Dovetail_2154:HG3_PB_SVrefine2Falcon1Dovetail_2213:HG2_PB_SVrefine2PBcRplusDovetail_7538:HG2_PB_SVrefine2PB10Xhap12_2607:HG2_PB_SVrefine2Falcon2Bionano_1645;NumExactMatchSVs=6;ClusterMaxShiftDist=0.000243917;ClusterMaxSizeDiff=0.000243902;ClusterMaxEditDist=0.000487835;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-8200;DistBack=40358;DistForward=-7570;DistMin=-7570;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=967;REFWIDENED=3:112743116-112752282;PctSeqSimilarity=0.9961;PctSizeSimilarity=0.9998;PctRecOverlap=0.9535;SizeDiff=2;StartDistance=-381;EndDistance=-379;GTMatch=0;TruScore=98;MatchId=2568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:47:./.:10:8:10:10:./.:0:0:0:0:0/0:54:0:0/1:369:177:8160:.:.
chr3	113854021	HG2_Ill_manta_1008	TGATATTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCGGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCGCGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_10X_allpass_679:HG4_Ill_Krunchall_5248:HG3_Ill_Krunchall_4974:HG3_PB_HySA_5525:HG4_PB_pbsv_3585:HG3_PB_pbsv_3487:HG2_PB_HySA_6765:HG4_Ill_MetaSV_3452:HG3_Ill_MetaSV_3479:HG2_Ill_tnscope_370:HG2_Ill_MetaSV_3307:HG4_PB_SVrefine2Falcon1Dovetail_2157:HG4_PB_HySA_5351:HG4_Ill_scalpel_3413:HG4_Ill_manta_869:HG4_Ill_SVrefine2DISCOVARDovetail_2708:HG4_Ill_GATKHCSBGrefine_2483:HG4_10X_allpass_640:HG3_PB_SVrefine2PBcRDovetail_1634:HG3_PB_SVrefine2Falcon1Dovetail_2218:HG3_Ill_scalpel_3612:HG3_Ill_manta_798:HG3_Ill_SVrefine2DISCOVARDovetail_2707:HG3_Ill_GATKHCSBGrefine_2401:HG2_PB_pbsv_3564:HG2_PB_SVrefine2PBcRplusDovetail_7541:HG2_PB_SVrefine2PB10Xhap12_2610:HG2_PB_SVrefine2Falcon2Bionano_1647:HG2_PB_SVrefine2Falcon1plusDovetail_8149:HG2_Ill_scalpel_3501:HG2_Ill_manta_1008:HG2_Ill_SpiralSDKrefine_11340:HG2_Ill_SVrefine2DISCOVARplusDovetail_8748:HG2_Ill_GATKHCSBGrefine_2390:HG2_10X_allpass_548:HG2_10X_SVrefine210Xhap12_2644:HG2_Ill_breakscan11_485;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2644:HG2_10X_allpass_548:HG2_Ill_GATKHCSBGrefine_2390:HG2_Ill_SVrefine2DISCOVARplusDovetail_8748:HG2_Ill_SpiralSDKrefine_11340:HG2_Ill_manta_1008:HG2_Ill_scalpel_3501:HG2_PB_SVrefine2Falcon1plusDovetail_8149:HG2_PB_SVrefine2Falcon2Bionano_1647:HG2_PB_SVrefine2PB10Xhap12_2610:HG2_PB_SVrefine2PBcRplusDovetail_7541:HG2_PB_pbsv_3564:HG3_Ill_GATKHCSBGrefine_2401:HG3_Ill_SVrefine2DISCOVARDovetail_2707:HG3_Ill_manta_798:HG3_Ill_scalpel_3612:HG3_PB_SVrefine2Falcon1Dovetail_2218:HG3_PB_SVrefine2PBcRDovetail_1634:HG4_10X_allpass_640:HG4_Ill_GATKHCSBGrefine_2483:HG4_Ill_SVrefine2DISCOVARDovetail_2708:HG4_Ill_manta_869:HG4_Ill_scalpel_3413:HG4_PB_HySA_5351:HG4_PB_SVrefine2Falcon1Dovetail_2157;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0508221;ClusterMaxSizeDiff=0.0508221;ClusterMaxEditDist=0.0508221;PBcalls=13;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-327;DistForward=21214;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=3:113854022-113854359;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:85:./.:0:10:0:2:./.:0:0:0:0:1/1:0:42:./.:3:20:.:.:.
chr3	114466474	HG4_Ill_scalpel_3418	ACAAGATTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8150:HG4_PB_HySA_5357:HG3_PB_HySA_5528:HG4_Ill_Krunchall_5258:HG2_Ill_Krunchall_5034:HG4_PB_assemblyticsfalcon_17661:HG2_PB_assemblyticsPBcR_17441:HG2_PB_assemblyticsfalcon_18066:HG3_PB_assemblyticsfalcon_17953:HG2_PB_pbsv_3566:HG2_PB_HySA_6770:HG4_Ill_MetaSV_3453:HG2_Ill_MetaSV_3309:HG4_PB_SVrefine2PBcRDovetail_1838:HG4_Ill_scalpel_3418:HG4_Ill_manta_871:HG4_Ill_GATKHCSBGrefine_2487:HG4_10X_allpass_643:HG3_PB_pbsv_3490:HG3_Ill_manta_801:HG3_Ill_GATKHCSBGrefine_2405:HG3_10X_allpass_681:HG2_Ill_scalpel_3506:HG2_Ill_manta_1010:HG2_Ill_breakscan11_486:HG2_Ill_GATKHCSBGrefine_2394:HG2_10X_allpass_549:HG2_Ill_tnscope_372:HG4_PB_pbsv_3587:HG4_PB_SVrefine2Falcon1Dovetail_2158:HG4_Ill_SVrefine2DISCOVARDovetail_2713:HG3_PB_SVrefine2PBcRDovetail_1636:HG3_PB_SVrefine2Falcon1Dovetail_2220:HG3_Ill_SVrefine2DISCOVARDovetail_2712:HG2_PB_SVrefine2PBcRplusDovetail_7543:HG2_PB_SVrefine2PB10Xhap12_2612:HG2_PB_SVrefine2Falcon2Bionano_1650:HG2_Ill_SVrefine2DISCOVARplusDovetail_8751:HG2_10X_SVrefine210Xhap12_2646;NumClusterSVs=39;ExactMatchIDs=HG2_10X_allpass_549:HG2_Ill_GATKHCSBGrefine_2394:HG2_Ill_breakscan11_486:HG2_Ill_manta_1010:HG2_Ill_scalpel_3506:HG3_10X_allpass_681:HG3_Ill_GATKHCSBGrefine_2405:HG3_Ill_manta_801:HG3_PB_pbsv_3490:HG4_10X_allpass_643:HG4_Ill_GATKHCSBGrefine_2487:HG4_Ill_manta_871:HG4_Ill_scalpel_3418:HG4_PB_SVrefine2PBcRDovetail_1838;NumExactMatchSVs=14;ClusterMaxShiftDist=0.107256;ClusterMaxSizeDiff=0.107256;ClusterMaxEditDist=0.107256;PBcalls=18;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=-368;DistForward=5296;DistMin=-368;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:114466469-114466808;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2570.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:./.:1:51:0:3:./.:0:0:0:0:1/1:0:49:./.:2:10:.:.:.
chr3	115024235	HG2_Ill_GATKHCSBGrefine_2396	TAAAACTTCTAGAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAACTACAAAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2650:HG4_Ill_Krunchall_5261:HG3_Ill_Krunchall_4983:HG2_Ill_Krunchall_5037:HG4_PB_assemblyticsfalcon_17666:HG2_PB_assemblyticsfalcon_18068:HG2_PB_assemblyticsPBcR_17443:HG4_PB_pbsv_3588:HG3_PB_pbsv_3493:HG2_PB_HySA_6772:HG4_Ill_MetaSV_3454:HG2_Ill_tnscope_373:HG2_Ill_MetaSV_3311:HG4_PB_SVrefine2PBcRDovetail_1839:HG4_PB_SVrefine2Falcon1Dovetail_2161:HG4_PB_HySA_5358:HG4_Ill_SVrefine2DISCOVARDovetail_2714:HG4_Ill_GATKHCSBGrefine_2488:HG4_10X_allpass_644:HG3_PB_assemblyticsfalcon_17957:HG3_PB_SVrefine2Falcon1Dovetail_2223:HG3_Ill_manta_802:HG3_Ill_SVrefine2DISCOVARDovetail_2713:HG3_Ill_MetaSV_3481:HG3_Ill_GATKHCSBGrefine_2406:HG3_10X_allpass_682:HG2_PB_pbsv_3568:HG2_PB_SVrefine2PBcRplusDovetail_7544:HG2_PB_SVrefine2PB10Xhap12_2614:HG2_PB_SVrefine2Falcon2Bionano_1652:HG2_PB_SVrefine2Falcon1plusDovetail_8152:HG2_Ill_scalpel_3509:HG2_Ill_manta_1011:HG2_Ill_breakscan11_487:HG2_Ill_SVrefine2DISCOVARplusDovetail_8753:HG2_Ill_GATKHCSBGrefine_2396:HG2_10X_allpass_550;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2650:HG4_PB_SVrefine2PBcRDovetail_1839:HG4_PB_SVrefine2Falcon1Dovetail_2161:HG4_PB_HySA_5358:HG4_Ill_SVrefine2DISCOVARDovetail_2714:HG4_Ill_GATKHCSBGrefine_2488:HG4_10X_allpass_644:HG3_PB_assemblyticsfalcon_17957:HG3_PB_SVrefine2Falcon1Dovetail_2223:HG3_Ill_manta_802:HG3_Ill_SVrefine2DISCOVARDovetail_2713:HG3_Ill_MetaSV_3481:HG3_Ill_GATKHCSBGrefine_2406:HG3_10X_allpass_682:HG2_PB_pbsv_3568:HG2_PB_SVrefine2PBcRplusDovetail_7544:HG2_PB_SVrefine2PB10Xhap12_2614:HG2_PB_SVrefine2Falcon2Bionano_1652:HG2_PB_SVrefine2Falcon1plusDovetail_8152:HG2_Ill_scalpel_3509:HG2_Ill_manta_1011:HG2_Ill_breakscan11_487:HG2_Ill_SVrefine2DISCOVARplusDovetail_8753:HG2_Ill_GATKHCSBGrefine_2396:HG2_10X_allpass_550;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0925373;ClusterMaxSizeDiff=0.0925373;ClusterMaxEditDist=0.0925373;PBcalls=16;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-341;DistBack=6019;DistForward=-326;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:115024236-115024592;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:57:1/1:5:24:0:27:./.:0:0:0:0:1/1:0:53:./.:1:13:.:.:.
chr3	116204835	HG2_PB_SVrefine2PBcRplusDovetail_7545	GCTAGACTGCTATTTTTACGCAGGTCCCTGACCCTGCTTCTCCTCACTAGGTAGGACTTCCTGACCAGGGTTACCAACCACCCTTACTGGTGTTTTCCAGCTGGTAGTGGTTCTGAGATTCCCTGGAACTGGGCACCATCTTTGCTGTTTCACAGCCTTAGCTGTTGTTGCCTGCAGGCTCTAGGGAGTCCAAGGTGACTAGGTCCTGGGGCAGTTCTCCAGCACAAAGCAGCAGCTCTACAAAGAAGTGGCCGGACTGCGTTCTCACATGGGTCTTGGGTCTCGTTTCTCTTCCCTGGGAGAAATCTCCCAACTGAGGTCTACAACCATCCTTGCCAGTGTTT	TCA	20	PASS	ClusterIDs=HG2_Ill_Krunchall_5047:HG4_PB_HySA_5367:HG4_Ill_GATKHCSBGrefine_2492:HG2_Ill_GATKHCSBGrefine_2400:HG2_Ill_tnscope_374:HG2_Ill_SpiralSDKrefine_11345:HG2_PB_SVrefine2PB10Xhap12_2615:HG2_PB_PB10Xdip_19867:HG4_PB_SVrefine2Falcon1Dovetail_2162:HG4_Ill_manta_872:HG3_PB_assemblyticsfalcon_17965:HG3_PB_SVrefine2Falcon1Dovetail_2224:HG2_PB_SVrefine2PBcRplusDovetail_7545:HG2_PB_SVrefine2Falcon1plusDovetail_8153:HG2_Ill_manta_1012:HG4_PB_SVrefine2PBcRDovetail_1840:HG4_Ill_MetaSV_3455:HG4_Ill_Spiral_295:HG2_Ill_Spiral_248:HG4_10X_allpass_645:HG2_10X_allpass_552:HG2_PB_HySA_6782:HG4_PB_assemblyticsfalcon_17673:HG2_PB_assemblyticsfalcon_18072:HG2_PB_assemblyticsPBcR_17451:HG4_PB_pbsv_3590:HG2_PB_pbsv_3569:HG2_Ill_Krunchall_5048:HG4_Ill_Krunchall_5270:HG4_Ill_svaba_4607:HG2_Ill_svaba_4503;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_manta_1012:HG2_PB_SVrefine2Falcon1plusDovetail_8153:HG2_PB_SVrefine2PBcRplusDovetail_7545:HG3_PB_SVrefine2Falcon1Dovetail_2224:HG3_PB_assemblyticsfalcon_17965:HG4_Ill_manta_872:HG4_PB_SVrefine2Falcon1Dovetail_2162;NumExactMatchSVs=7;ClusterMaxShiftDist=0.265139;ClusterMaxSizeDiff=0.265139;ClusterMaxEditDist=0.265139;PBcalls=15;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-341;DistBack=-43;DistForward=-343;DistMin=-343;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:116204835-116205178;PctSeqSimilarity=0.9956;PctSizeSimilarity=0.9971;PctRecOverlap=0.9913;SizeDiff=1;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2572.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:40:0|1:19:1:1:37:./.:0:0:0:0:0/1:50:16:0/1:38:9:.:.:.
chr3	116275271	HG2_Ill_GATKHCSBGrefine_2402	TAAAAAATCTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_5050:HG2_10X_allpass_553:HG3_PB_HySA_5537:HG3_Ill_Krunchall_4991:HG2_Ill_Krunchall_5053:HG4_Ill_Krunchall_5273:HG2_Ill_Krunchall_5052:HG4_PB_assemblyticsfalcon_17675:HG2_PB_assemblyticsfalcon_18075:HG2_PB_assemblyticsPBcR_17454:HG3_PB_assemblyticsfalcon_17969:HG4_PB_HySA_5368:HG2_PB_pbsv_3571:HG4_Ill_MetaSV_3456:HG3_Ill_MetaSV_3482:HG2_Ill_tnscope_375:HG2_Ill_MetaSV_3313:HG4_PB_pbsv_3592:HG4_PB_SVrefine2PBcRDovetail_1841:HG4_PB_SVrefine2Falcon1Dovetail_2163:HG4_Ill_scalpel_3427:HG4_Ill_SVrefine2DISCOVARDovetail_2717:HG4_Ill_GATKHCSBGrefine_2495:HG4_10X_allpass_647:HG3_PB_SVrefine2PBcRDovetail_1639:HG3_PB_SVrefine2Falcon1Dovetail_2225:HG3_Ill_scalpel_3623:HG3_Ill_SVrefine2DISCOVARDovetail_2717:HG3_Ill_GATKHCSBGrefine_2410:HG3_10X_allpass_683:HG2_PB_SVrefine2PBcRplusDovetail_7546:HG2_PB_SVrefine2PB10Xhap12_2616:HG2_PB_SVrefine2Falcon2Bionano_1653:HG2_PB_SVrefine2Falcon1plusDovetail_8154:HG2_PB_HySA_6783:HG2_Ill_scalpel_3516:HG2_Ill_manta_1013:HG2_Ill_breakscan11_488:HG2_Ill_SVrefine2DISCOVARplusDovetail_8757:HG2_Ill_GATKHCSBGrefine_2402:HG2_10X_SVrefine210Xhap12_2652:HG3_PB_pbsv_3495:HG4_Ill_Krunchall_5272:HG2_Ill_Krunchall_5051;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2652:HG2_Ill_GATKHCSBGrefine_2402:HG2_Ill_SVrefine2DISCOVARplusDovetail_8757:HG2_Ill_breakscan11_488:HG2_Ill_manta_1013:HG2_Ill_scalpel_3516:HG2_PB_HySA_6783:HG2_PB_SVrefine2Falcon1plusDovetail_8154:HG2_PB_SVrefine2Falcon2Bionano_1653:HG2_PB_SVrefine2PB10Xhap12_2616:HG2_PB_SVrefine2PBcRplusDovetail_7546:HG3_10X_allpass_683:HG3_Ill_GATKHCSBGrefine_2410:HG3_Ill_SVrefine2DISCOVARDovetail_2717:HG3_Ill_scalpel_3623:HG3_PB_SVrefine2Falcon1Dovetail_2225:HG3_PB_SVrefine2PBcRDovetail_1639:HG4_10X_allpass_647:HG4_Ill_GATKHCSBGrefine_2495:HG4_Ill_SVrefine2DISCOVARDovetail_2717:HG4_Ill_scalpel_3427:HG4_PB_SVrefine2Falcon1Dovetail_2163:HG4_PB_SVrefine2PBcRDovetail_1841:HG4_PB_pbsv_3592;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0783699;ClusterMaxSizeDiff=0.0783699;ClusterMaxEditDist=0.187005;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=67431;DistForward=5627;DistMin=5627;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=3:116275272-116275608;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2573.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:2:31:1:30:./.:0:0:0:0:1/1:0:41:./.:2:14:.:.:.
chr3	118437192	HG4_Ill_GATKHCSBGrefine_2508	ACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCCCACCTC	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_4618:HG2_PB_pbsv_3576:HG2_PB_assemblyticsfalcon_18093:HG2_PB_assemblyticsPBcR_17468:HG4_PB_pbsv_3597:HG4_PB_assemblyticsfalcon_17695:HG4_Ill_svaba_4632:HG4_Ill_scalpel_3446:HG4_Ill_GATKHC_6039:HG4_Ill_GATKHCSBGrefine_2508:HG4_Ill_250bpfermikitraw_5073:HG4_Ill_150bpfermikitraw_4812:HG3_PB_pbsv_3502:HG3_PB_assemblyticsfalcon_17985:HG3_Ill_svaba_4604:HG3_Ill_scalpel_3639:HG3_Ill_Krunchall_5008:HG3_Ill_GATKHC_5999:HG3_Ill_GATKHCSBGrefine_2420:HG3_Ill_250bpfermikitraw_4859:HG3_Ill_150bpfermikitraw_4694:HG3_10X_allpass_685:HG2_Ill_svaba_4522:HG2_Ill_scalpel_3532:HG2_Ill_GATKHC_5923:HG2_Ill_GATKHCSBGrefine_2415:HG2_Ill_250bpfermikitraw_4979;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4618:HG4_Ill_svaba_4632:HG4_Ill_scalpel_3446:HG4_Ill_GATKHC_6039:HG4_Ill_GATKHCSBGrefine_2508:HG4_Ill_250bpfermikitraw_5073:HG4_Ill_150bpfermikitraw_4812:HG3_PB_pbsv_3502:HG3_PB_assemblyticsfalcon_17985:HG3_Ill_svaba_4604:HG3_Ill_scalpel_3639:HG3_Ill_Krunchall_5008:HG3_Ill_GATKHC_5999:HG3_Ill_GATKHCSBGrefine_2420:HG3_Ill_250bpfermikitraw_4859:HG3_Ill_150bpfermikitraw_4694:HG3_10X_allpass_685:HG2_Ill_svaba_4522:HG2_Ill_scalpel_3532:HG2_Ill_GATKHC_5923:HG2_Ill_GATKHCSBGrefine_2415:HG2_Ill_250bpfermikitraw_4979;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.038835;PBcalls=7;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=35276;DistForward=91830;DistMin=35276;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=27;REFWIDENED=3:118437191-118437271;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2574.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:72:1/1:4:23:2:31:./.:0:0:0:0:1/1:2:37:./.:.:.:.:.:.
chr3	119893983	HG2_PB_pbsv_3577	CAGACTGAGGCCTCTCTGCAGGGCTGGCAGAGGAGCAGCTCAGCACTGGCGTAAGGGCCCTCCCAGGGCTTTTGGTCTTCCTGTCTCTAAATTGGCCAAGTGGAGCCAAGATACCCCTTGATTACTCTAGCCCTTCATTCCTCATTTGTGAAGATACTCCTTAAGGCTCAACCCTTCAGGGTTTCTGGAATCCAGCTATGAATTTCACAATTCAGGGCCTCTCCTCTGCCTTCCTCCAGAAGGACAGGCAGATTCTGGTTTTCTGAGCCTCTGGGCTATGGGGGTGTGGCAGACTGAACAGTGGCTTCTCAAAGATGTTCTCTCTCATCCTAATTCCTGGAGCCTGTGAATATGTGACCTTATGTGGCAAAAGGGACTTTGCAAATGTAATTAAGGATTTCAAGAGGGGTGATTATTCTGGGTTATCCAAGTGGGCCCAATGTAATCACAAGAATCCTTAT	C	20	PASS	ClusterIDs=HG2_PB_HySA_6815:HG4_10X_allpass_648:HG4_Ill_Krunchall_5309:HG3_Ill_Krunchall_5017:HG2_Ill_Krunchall_5081:HG2_PB_HySA_6816:HG4_PB_HySA_5392:HG3_PB_HySA_5562:HG4_PB_assemblyticsfalcon_17700:HG2_PB_assemblyticsfalcon_18101:HG2_PB_assemblyticsPBcR_17479:HG3_PB_assemblyticsfalcon_17993:HG3_Ill_Krunchall_5016:HG2_Ill_Krunchall_5080:HG4_Ill_MetaSV_3457:HG3_Ill_MetaSV_3485:HG2_Ill_tnscope_376:HG2_Ill_MetaSV_3315:HG4_PB_pbsv_3598:HG4_PB_SVrefine2PBcRDovetail_1847:HG4_PB_SVrefine2Falcon1Dovetail_2167:HG4_Ill_manta_876:HG4_Ill_SVrefine2DISCOVARDovetail_2724:HG4_Ill_GATKHCSBGrefine_2510:HG3_PB_pbsv_3503:HG3_PB_SVrefine2PBcRDovetail_1643:HG3_PB_SVrefine2Falcon1Dovetail_2229:HG3_Ill_manta_805:HG3_Ill_SVrefine2DISCOVARDovetail_2729:HG3_Ill_GATKHCSBGrefine_2422:HG3_10X_allpass_686:HG2_PB_pbsv_3577:HG2_PB_SVrefine2PBcRplusDovetail_7552:HG2_PB_SVrefine2PB10Xhap12_2619:HG2_PB_SVrefine2Falcon2Bionano_1655:HG2_PB_SVrefine2Falcon1plusDovetail_8157:HG2_Ill_manta_1015:HG2_Ill_breakscan11_489:HG2_Ill_SpiralSDKrefine_11367:HG2_Ill_SVrefine2DISCOVARplusDovetail_8770:HG2_Ill_GATKHCSBGrefine_2417:HG2_10X_allpass_554:HG2_10X_SVrefine210Xhap12_2661;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2661:HG2_10X_allpass_554:HG2_Ill_GATKHCSBGrefine_2417:HG2_Ill_SVrefine2DISCOVARplusDovetail_8770:HG2_Ill_SpiralSDKrefine_11367:HG2_Ill_breakscan11_489:HG2_Ill_manta_1015:HG2_PB_SVrefine2Falcon1plusDovetail_8157:HG2_PB_SVrefine2Falcon2Bionano_1655:HG2_PB_SVrefine2PB10Xhap12_2619:HG2_PB_SVrefine2PBcRplusDovetail_7552:HG2_PB_pbsv_3577:HG3_10X_allpass_686:HG3_Ill_GATKHCSBGrefine_2422:HG3_Ill_SVrefine2DISCOVARDovetail_2729:HG3_Ill_manta_805:HG3_PB_SVrefine2Falcon1Dovetail_2229:HG3_PB_SVrefine2PBcRDovetail_1643:HG3_PB_pbsv_3503:HG4_Ill_GATKHCSBGrefine_2510:HG4_Ill_SVrefine2DISCOVARDovetail_2724:HG4_Ill_manta_876:HG4_PB_SVrefine2Falcon1Dovetail_2167:HG4_PB_SVrefine2PBcRDovetail_1847:HG4_PB_pbsv_3598;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0196292;ClusterMaxSizeDiff=0.0196292;ClusterMaxEditDist=0.0196292;PBcalls=19;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-460;DistBack=-461;DistForward=-459;DistMin=-461;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=3:119893984-119894445;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2575.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:79:./.:0:3:0:2:./.:0:0:0:0:1/1:0:43:./.:1:17:.:.:.
chr3	120591471	HG2_Ill_250bpfermikitraw_4998	ACAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2664:HG4_PB_assemblyticsfalcon_17706:HG4_Ill_GATKHC_6056:HG4_Ill_GATKHCSBGrefine_2515:HG4_Ill_GATKHC_6055:HG4_Ill_GATKHCSBGrefine_2514:HG4_Ill_250bpfermikitraw_5085:HG4_Ill_150bpfermikitraw_4823:HG2_Ill_Krunchall_5089:HG2_Ill_GATKHC_5944:HG2_Ill_GATKHCSBGrefine_2421:HG2_Ill_250bpfermikitraw_4998:HG2_Ill_150bpfermikitraw_4635:HG4_PB_HySA_5401:HG4_Ill_Krunchall_5315:HG3_Ill_Spiral_3928:HG3_Ill_Krunchall_5024:HG3_Ill_GATKHC_6016:HG3_Ill_GATKHCSBGrefine_2426:HG3_Ill_250bpfermikitraw_4872:HG2_PB_assemblyticsfalcon_18111:HG4_Ill_SVrefine2DISCOVARDovetail_2727:HG2_PB_SVrefine2PBcRplusDovetail_7556:HG2_PB_SVrefine2PB10Xhap12_2622;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4635:HG2_Ill_250bpfermikitraw_4998:HG2_Ill_GATKHCSBGrefine_2421:HG2_Ill_GATKHC_5944:HG2_Ill_Krunchall_5089:HG4_Ill_150bpfermikitraw_4823:HG4_Ill_250bpfermikitraw_5085:HG4_Ill_GATKHCSBGrefine_2514:HG4_Ill_GATKHC_6055;NumExactMatchSVs=9;ClusterMaxShiftDist=0.217391;ClusterMaxSizeDiff=0.217391;ClusterMaxEditDist=0.217391;PBcalls=5;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-50;DistBack=-1;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=63;REFWIDENED=3:120591468-120591580;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:30:0|1:32:3:2:25:./.:0:0:0:0:0/1:30:25:./.:.:.:.:.:.
chr3	121273820	HG3_Ill_GATKHC_6020	GAAAGAAAGATGAAAGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAAGAAAAGAAAGAAAGAAAA	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_5092:HG4_Ill_GATKHC_6059:HG4_Ill_GATKHCSBGrefine_2516:HG3_Ill_GATKHC_6020:HG2_Ill_GATKHC_5947:HG2_Ill_GATKHCSBGrefine_2422:HG2_PB_SVrefine2PB10Xhap12_2624:HG2_PB_SVrefine2Falcon2Bionano_1658:HG2_Ill_SVrefine2DISCOVARplusDovetail_8776:HG3_PB_SVrefine2PBcRDovetail_1646:HG4_Ill_scalpel_3457:HG3_Ill_scalpel_3653:HG2_Ill_scalpel_3547:HG2_10X_allpass_555:HG2_Ill_manta_1017:HG2_Ill_SpiralSDKrefine_11376:HG3_PB_HySA_5576:HG2_PB_pbsv_3582:HG4_PB_pbsv_3604:HG3_PB_pbsv_3508;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2422:HG2_Ill_GATKHC_5947:HG3_Ill_GATKHC_6020:HG4_Ill_GATKHCSBGrefine_2516:HG4_Ill_GATKHC_6059;NumExactMatchSVs=5;ClusterMaxShiftDist=0.134529;ClusterMaxSizeDiff=0.134529;ClusterMaxEditDist=0.143498;PBcalls=7;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=-111;DistBack=-32;DistForward=-90;DistMin=-90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:121273821-121273932;PctSeqSimilarity=0.9496;PctSizeSimilarity=0.9407;PctRecOverlap=0.8067;SizeDiff=-7;StartDistance=23;EndDistance=16;GTMatch=0;TruScore=89;MatchId=2577.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:30:0|1:23:3:3:25:./.:0:0:0:0:0/1:19:10:./.:.:.:.:.:.
chr3	121883518	HG2_PB_SVrefine2PBcRplusDovetail_7557	CGCCCGGCCAGCCGTGCCGTCCAGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGTGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8160:HG2_PB_SVrefine2PB10Xhap12_2625:HG3_PB_SVrefine2Falcon1Dovetail_2233:HG2_Ill_MetaSV_3317:HG4_PB_pbsv_3606:HG3_PB_pbsv_3510:HG2_PB_pbsv_3583:HG4_PB_SVrefine2PBcRDovetail_1851:HG3_PB_SVrefine2PBcRDovetail_1647:HG2_PB_SVrefine2PBcRplusDovetail_7557:HG2_PB_SVrefine2Falcon2Bionano_1659;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8160:HG4_PB_SVrefine2PBcRDovetail_1851:HG3_PB_SVrefine2PBcRDovetail_1647:HG2_PB_SVrefine2PBcRplusDovetail_7557:HG2_PB_SVrefine2Falcon2Bionano_1659;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0113154;ClusterMaxSizeDiff=0.0113154;ClusterMaxEditDist=0.01983;PBcalls=10;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-353;DistBack=935;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=350;REFWIDENED=3:121883412-121884164;PctSeqSimilarity=0.9704;PctSizeSimilarity=0.9972;PctRecOverlap=0.8107;SizeDiff=1;StartDistance=-67;EndDistance=-66;GTMatch=0;TruScore=92;MatchId=2578.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:33:1/1:1:16:1:15:./.:0:0:0:0:./.:1:4:0/1:5:5:.:.:.
chr3	122138442	HG4_Ill_GATKHCSBGrefine_2520	TAGAAATGAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2627:HG2_PB_SVrefine2PBcRplusDovetail_7559:HG3_Ill_Krunchall_5039:HG2_Ill_Krunchall_5103:HG2_PB_assemblyticsPBcR_17508:HG4_PB_assemblyticsfalcon_17713:HG3_PB_assemblyticsfalcon_18008:HG4_Ill_Spiral_297:HG3_PB_HySA_5581:HG4_Ill_MetaSV_3460:HG2_Ill_MetaSV_3318:HG4_PB_pbsv_3607:HG4_PB_SVrefine2Falcon1Dovetail_2170:HG4_Ill_scalpel_3463:HG4_Ill_manta_878:HG4_Ill_GATKHCSBGrefine_2520:HG4_10X_allpass_650:HG3_PB_pbsv_3511:HG3_PB_SVrefine2PBcRDovetail_1648:HG3_PB_SVrefine2Falcon1Dovetail_2234:HG3_Ill_scalpel_3659:HG3_Ill_manta_806:HG3_Ill_MetaSV_3487:HG3_Ill_GATKHCSBGrefine_2429:HG3_10X_allpass_687:HG2_PB_pbsv_3584:HG2_PB_SVrefine2PB10Xhap12_2628:HG2_PB_SVrefine2Falcon2Bionano_1661:HG2_Ill_breakscan11_491:HG2_Ill_GATKHCSBGrefine_2425:HG2_10X_allpass_556:HG2_10X_SVrefine210Xhap12_2667:HG3_Ill_Spiral_3940:HG2_Ill_Spiral_250;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2667:HG2_10X_allpass_556:HG2_Ill_GATKHCSBGrefine_2425:HG2_Ill_breakscan11_491:HG2_PB_SVrefine2Falcon2Bionano_1661:HG2_PB_SVrefine2PB10Xhap12_2628:HG2_PB_pbsv_3584:HG3_10X_allpass_687:HG3_Ill_GATKHCSBGrefine_2429:HG3_Ill_MetaSV_3487:HG3_Ill_manta_806:HG3_Ill_scalpel_3659:HG3_PB_SVrefine2Falcon1Dovetail_2234:HG3_PB_SVrefine2PBcRDovetail_1648:HG3_PB_pbsv_3511:HG4_10X_allpass_650:HG4_Ill_GATKHCSBGrefine_2520:HG4_Ill_manta_878:HG4_Ill_scalpel_3463:HG4_PB_SVrefine2Falcon1Dovetail_2170:HG4_PB_pbsv_3607;NumExactMatchSVs=21;ClusterMaxShiftDist=0.130031;ClusterMaxSizeDiff=0.130031;ClusterMaxEditDist=0.130031;PBcalls=14;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-231;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=3:122138443-122138777;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2579.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:0|1:25:2:0:30:./.:0:0:0:0:0/1:35:15:0/1:38:8:.:.:.
chr3	123197496	HG3_PB_SVrefine2Falcon1Dovetail_2238	ATTCAGATGGACGGTGCTGGAGCAGGCAGAGCTTTCAGGTGGACAGTGCTGGGGCAGGCAGGGCTTTCAGGTGGACAGTGCTGGGGCAGGCAGGGCTTTCAGGTGGACAGTGCTGGGGCAGGCAGGGCTTTCAGGTGGACAGTGCTGGGGCAGGCAGGGCTTTCAGGTGGACAGTGCTGGGGCAGGCAGGGCTTTCAGGTGGACAGTGCTGGGGCAGGCAGGGCTTTCAGGTGGACAGTGCTGGGGCAGGCAGGGCTTTCAGGTGGACAGTGCTGGGGCAGGCAGGGCT	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8783:HG2_PB_HySA_6849:HG4_Ill_MetaSV_3463:HG3_Ill_MetaSV_3489:HG2_Ill_MetaSV_3319:HG3_10X_allpass_688:HG2_10X_SVrefine210Xhap12_2671:HG4_PB_SVrefine2PBcRDovetail_1855:HG2_PB_pbsv_3590:HG3_PB_pbsv_3517:HG4_PB_pbsv_3615:HG4_PB_SVrefine2Falcon1Dovetail_2174:HG3_PB_SVrefine2PBcRDovetail_1653:HG3_PB_SVrefine2Falcon1Dovetail_2238:HG3_Ill_SVrefine2DISCOVARDovetail_2743:HG2_PB_SVrefine2PBcRplusDovetail_7567:HG2_PB_SVrefine2PB10Xhap12_2631:HG2_PB_SVrefine2Falcon2Bionano_1664:HG2_PB_SVrefine2Falcon1plusDovetail_8163;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8783:HG4_PB_SVrefine2PBcRDovetail_1855:HG4_PB_SVrefine2Falcon1Dovetail_2174:HG3_PB_SVrefine2PBcRDovetail_1653:HG3_PB_SVrefine2Falcon1Dovetail_2238:HG3_Ill_SVrefine2DISCOVARDovetail_2743:HG2_PB_SVrefine2PBcRplusDovetail_7567:HG2_PB_SVrefine2PB10Xhap12_2631:HG2_PB_SVrefine2Falcon2Bionano_1664:HG2_PB_SVrefine2Falcon1plusDovetail_8163;NumExactMatchSVs=10;ClusterMaxShiftDist=0.290801;ClusterMaxSizeDiff=0.290801;ClusterMaxEditDist=0.290801;PBcalls=12;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-288;DistBack=2438;DistForward=-243;DistMin=-243;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=191;REFWIDENED=3:123197529-123197975;PctSeqSimilarity=0.975;PctSizeSimilarity=1;PctRecOverlap=0.8997;SizeDiff=0;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=95;MatchId=2580.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:56:1/1:1:24:1:17:./.:0:0:0:0:0/0:25:1:./.:.:.:.:.:.
chr3	123236746	HG3_Ill_manta_808	TAAAAATATTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_252:HG2_PB_assemblyticsfalcon_18129:HG2_PB_assemblyticsPBcR_17524:HG3_PB_assemblyticsfalcon_18019:HG4_Ill_Krunchall_5331:HG3_Ill_Krunchall_5047:HG2_Ill_Krunchall_5110:HG3_PB_HySA_5589:HG4_Ill_MetaSV_3466:HG3_Ill_MetaSV_3491:HG2_PB_HySA_6851:HG2_Ill_tnscope_377:HG2_Ill_MetaSV_3321:HG4_PB_pbsv_3618:HG4_PB_assemblyticsfalcon_17725:HG4_PB_SVrefine2PBcRDovetail_1856:HG4_PB_SVrefine2Falcon1Dovetail_2176:HG4_Ill_svaba_4656:HG4_Ill_scalpel_3467:HG4_Ill_SVrefine2DISCOVARDovetail_2745:HG4_Ill_GATKHCSBGrefine_2524:HG4_10X_allpass_651:HG3_PB_SVrefine2PBcRDovetail_1655:HG3_PB_SVrefine2Falcon1Dovetail_2240:HG3_Ill_svaba_4634:HG3_Ill_scalpel_3663:HG3_Ill_manta_808:HG3_Ill_SVrefine2DISCOVARDovetail_2744:HG3_Ill_GATKHCSBGrefine_2433:HG3_10X_allpass_689:HG2_PB_pbsv_3592:HG2_PB_SVrefine2PBcRplusDovetail_7569:HG2_PB_SVrefine2PB10Xhap12_2633:HG2_PB_SVrefine2Falcon2Bionano_1666:HG2_PB_SVrefine2Falcon1plusDovetail_8165:HG2_Ill_svaba_4552:HG2_Ill_scalpel_3556:HG2_Ill_manta_1019:HG2_Ill_SVrefine2DISCOVARplusDovetail_8784:HG2_Ill_GATKHCSBGrefine_2430:HG2_10X_allpass_557:HG2_10X_SVrefine210Xhap12_2673:HG3_PB_pbsv_3519:HG2_Ill_breakscan11_492:HG4_Ill_Spiral_298:HG3_Ill_Spiral_3948;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2673:HG2_10X_allpass_557:HG2_Ill_GATKHCSBGrefine_2430:HG2_Ill_SVrefine2DISCOVARplusDovetail_8784:HG2_Ill_manta_1019:HG2_Ill_scalpel_3556:HG2_Ill_svaba_4552:HG2_PB_SVrefine2Falcon1plusDovetail_8165:HG2_PB_SVrefine2Falcon2Bionano_1666:HG2_PB_SVrefine2PB10Xhap12_2633:HG2_PB_SVrefine2PBcRplusDovetail_7569:HG2_PB_pbsv_3592:HG3_10X_allpass_689:HG3_Ill_GATKHCSBGrefine_2433:HG3_Ill_SVrefine2DISCOVARDovetail_2744:HG3_Ill_manta_808:HG3_Ill_scalpel_3663:HG3_Ill_svaba_4634:HG3_PB_SVrefine2Falcon1Dovetail_2240:HG3_PB_SVrefine2PBcRDovetail_1655:HG4_10X_allpass_651:HG4_Ill_GATKHCSBGrefine_2524:HG4_Ill_SVrefine2DISCOVARDovetail_2745:HG4_Ill_scalpel_3467:HG4_Ill_svaba_4656:HG4_PB_SVrefine2Falcon1Dovetail_2176:HG4_PB_SVrefine2PBcRDovetail_1856:HG4_PB_assemblyticsfalcon_17725:HG4_PB_pbsv_3618;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0675241;ClusterMaxSizeDiff=0.0675241;ClusterMaxEditDist=0.0675241;PBcalls=17;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=-355;DistForward=-305;DistMin=-355;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=3:123236747-123237072;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2581.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:./.:0:0:0:0:./.:0:0:0:0:1/1:0:65:0/1:3:13:.:.:.
chr3	124890049	HG2_10X_allpass_558	TGAAAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGCAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACGCCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAACATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAAAAAAAAAGAAAATTAAAAAGTAAAAAAAAAAAAAAAAAGAAAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_3602:HG4_Ill_Spiral_299:HG3_Ill_Spiral_3963:HG2_Ill_Spiral_253:HG3_PB_assemblyticsfalcon_18035:HG2_PB_assemblyticsfalcon_18144:HG2_PB_assemblyticsPBcR_17547:HG4_PB_assemblyticsfalcon_17742:HG3_PB_pbsv_3529:HG3_Ill_Krunchall_5060:HG2_Ill_Krunchall_5121:HG2_Ill_tnscope_378:HG2_Ill_MetaSV_3324:HG4_PB_SVrefine2PBcRDovetail_1863:HG4_PB_SVrefine2Falcon1Dovetail_2184:HG4_Ill_manta_881:HG4_Ill_SVrefine2DISCOVARDovetail_2756:HG4_Ill_MetaSV_3470:HG4_Ill_GATKHCSBGrefine_2528:HG4_10X_allpass_653:HG3_PB_SVrefine2PBcRDovetail_1661:HG3_PB_SVrefine2Falcon1Dovetail_2247:HG3_Ill_manta_812:HG3_Ill_SVrefine2DISCOVARDovetail_2751:HG3_Ill_MetaSV_3496:HG3_Ill_GATKHCSBGrefine_2437:HG3_10X_allpass_690:HG2_PB_SVrefine2PBcRplusDovetail_7582:HG2_PB_SVrefine2PB10Xhap12_2643:HG2_PB_SVrefine2Falcon2Bionano_1673:HG2_PB_SVrefine2Falcon1plusDovetail_8172:HG2_Ill_manta_1022:HG2_Ill_SVrefine2DISCOVARplusDovetail_8792:HG2_Ill_GATKHCSBGrefine_2435:HG2_10X_allpass_558:HG2_10X_SVrefine210Xhap12_2682:HG4_PB_pbsv_3631;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2682:HG2_10X_allpass_558:HG2_Ill_GATKHCSBGrefine_2435:HG2_Ill_SVrefine2DISCOVARplusDovetail_8792:HG2_Ill_manta_1022:HG2_PB_SVrefine2Falcon1plusDovetail_8172:HG2_PB_SVrefine2Falcon2Bionano_1673:HG2_PB_SVrefine2PB10Xhap12_2643:HG2_PB_SVrefine2PBcRplusDovetail_7582:HG3_10X_allpass_690:HG3_Ill_GATKHCSBGrefine_2437:HG3_Ill_MetaSV_3496:HG3_Ill_SVrefine2DISCOVARDovetail_2751:HG3_Ill_manta_812:HG3_PB_SVrefine2Falcon1Dovetail_2247:HG3_PB_SVrefine2PBcRDovetail_1661:HG4_10X_allpass_653:HG4_Ill_GATKHCSBGrefine_2528:HG4_Ill_MetaSV_3470:HG4_Ill_SVrefine2DISCOVARDovetail_2756:HG4_Ill_manta_881:HG4_PB_SVrefine2Falcon1Dovetail_2184:HG4_PB_SVrefine2PBcRDovetail_1863;NumExactMatchSVs=23;ClusterMaxShiftDist=0.00910273;ClusterMaxSizeDiff=0.00910273;ClusterMaxEditDist=0.0116959;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-770;DistBack=15579;DistForward=-766;DistMin=-766;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=3:124890050-124890823;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2582.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:23:0:19:./.:0:0:0:0:1/1:0:31:0/1:9:21:757:.:.
chr3	124936295	HG4_10X_allpass_654	TCTGGATTTTTATTTATTTATTTTTTCTTGCAACAAGCATACGTTACTTTGGAATCTGGAAGGGGTGGGGTGGGAGATGAATAAGAAAATTAAAAAACAAACAATGTGGGGTAGATTGTATTTCCCATATGCTCTTCCTACAATATGATGTTGGGATTCCTTCAAAAGGAGTTAGGGTCTATGTTACCTCCCACTGAGCCTGAGTGGACCTTTTTAAGTGCCCCAGCCAACAGGAGAAATGGCAGAAATGACACTACATGACTTTGTGGGCTAGGTCCTAAAGGCAATACGGAGCCTGGCTTCCTCACTGTCAGTGCACTTACCCTTGGGATTCAGCCACCATGTTGTGAGGAAGCCACATGGAGAGGCCACATGTTGGTGTTCCAGCCAATAGCCAGTGTCAACCACTGGACATGTGAGTGAAACAAGCCTGCAGATGATTCCAGCCGCCCGCGGAGGCTCCAGGCATTGTAGAGCAAAGACAAGCTGTGCTTGCTGGGCTCTGTCTGAATTCCTGACTCACAGAACCCATAAGAGAAAATAAATCATTGTTGTTGTTGTAAGCCACTAAGGTTTGGGGTAATCTGTTACGCAGTGATAGTGAATACCTAGAGCATCCAACCAAGGTTAAAAAAAAAACATTTTATTTCCCTTCAAAGTATTTCTATTTATTTCATTGTTTGAATTCACTGTTTTTGAAGCCCGGTTATATATATAAAAAGAATAATATTGCTATTAAAACTCACTTTTTTTTTTGAGACGGAGTTTCGCTTTTGTTGCCCAGGCTGGAGTGCAATGGCACAATCTTGGCTCATGGCAACCTCCACCTCCTGGGTTCAAGTGATTCCCCTGCCTCAGCCTCCCGAGTA	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3471:HG3_10X_allpass_691:HG2_Ill_tnscope_379:HG4_PB_pbsv_3632:HG4_Ill_manta_882:HG4_10X_allpass_654:HG3_PB_pbsv_3530:HG3_Ill_manta_813:HG3_Ill_MetaSV_3497:HG2_PB_pbsv_3603:HG2_PB_SVrefine2Falcon1plusDovetail_8173:HG2_Ill_SpiralSDKrefine_11394:HG2_Ill_GATKHCSBGrefine_2436:HG2_10X_allpass_559:HG4_PB_SVrefine2PBcRDovetail_1864:HG4_PB_SVrefine2Falcon1Dovetail_2185:HG4_Ill_Spiral_300:HG3_Ill_Spiral_3964:HG2_PB_SVrefine2PB10Xhap12_2644:HG2_PB_SVrefine2Falcon2Bionano_1674:HG2_Ill_Spiral_254:HG2_Ill_SVrefine2DISCOVARplusDovetail_8793:HG2_Ill_MetaSV_3325:HG2_10X_SVrefine210Xhap12_2683:HG2_PB_assemblyticsfalcon_18145:HG3_Ill_Krunchall_5061:HG2_Ill_Krunchall_5122;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_559:HG2_Ill_GATKHCSBGrefine_2436:HG2_Ill_SpiralSDKrefine_11394:HG2_PB_SVrefine2Falcon1plusDovetail_8173:HG2_PB_pbsv_3603:HG3_Ill_MetaSV_3497:HG3_Ill_manta_813:HG3_PB_pbsv_3530:HG4_10X_allpass_654:HG4_Ill_manta_882:HG4_PB_pbsv_3632;NumExactMatchSVs=11;ClusterMaxShiftDist=0.201968;ClusterMaxSizeDiff=0.201968;ClusterMaxEditDist=0.201968;PBcalls=9;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-868;DistBack=43998;DistForward=-868;DistMin=-868;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:124936296-124937163;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2583.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:34:./.:38:6:8:20:./.:0:0:0:0:0/1:67:19:0/1:66:29:.:.:.
chr3	125062286	HG2_Ill_scalpel_3561	GGGATTGTAAAATGCACCAATCAGCGCTCTGTAAAAACTCACCAATGAGCACTCTGTAGCTAGCAAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2684:HG4_PB_pbsv_3633:HG3_PB_pbsv_3531:HG3_PB_HySA_5604:HG2_PB_HySA_6873:HG2_PB_assemblyticsfalcon_18147:HG2_PB_HySA_6872:HG2_PB_pbsv_3604:HG4_PB_assemblyticsfalcon_17743:HG4_Ill_svaba_4668:HG4_Ill_scalpel_3475:HG4_Ill_manta_883:HG4_Ill_Krunchall_5343:HG4_Ill_GATKHC_6089:HG4_Ill_GATKHCSBGrefine_2529:HG4_Ill_250bpfermikitraw_5108:HG4_Ill_150bpfermikitraw_4850:HG3_Ill_svaba_4648:HG3_Ill_scalpel_3673:HG3_Ill_Krunchall_5065:HG3_Ill_GATKHC_6050:HG3_Ill_GATKHCSBGrefine_2438:HG3_Ill_250bpfermikitraw_4909:HG3_Ill_150bpfermikitraw_4738:HG2_PB_assemblyticsPBcR_17550:HG2_Ill_svaba_4565:HG2_Ill_scalpel_3561:HG2_Ill_manta_1023:HG2_Ill_SpiralSDKrefine_11396:HG2_Ill_Krunchall_5126:HG2_Ill_GATKHC_5977:HG2_Ill_GATKHCSBGrefine_2437:HG2_Ill_250bpfermikitraw_5026:HG2_Ill_150bpfermikitraw_4661:HG4_PB_SVrefine2PBcRDovetail_1865:HG3_PB_SVrefine2PBcRDovetail_1662:HG3_PB_SVrefine2Falcon1Dovetail_2248:HG3_Ill_SVrefine2DISCOVARDovetail_2753:HG2_Ill_SVrefine2DISCOVARplusDovetail_8795;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4661:HG2_Ill_250bpfermikitraw_5026:HG2_Ill_GATKHCSBGrefine_2437:HG2_Ill_GATKHC_5977:HG2_Ill_Krunchall_5126:HG2_Ill_SpiralSDKrefine_11396:HG2_Ill_manta_1023:HG2_Ill_scalpel_3561:HG2_Ill_svaba_4565:HG2_PB_assemblyticsPBcR_17550:HG3_Ill_150bpfermikitraw_4738:HG3_Ill_250bpfermikitraw_4909:HG3_Ill_GATKHCSBGrefine_2438:HG3_Ill_GATKHC_6050:HG3_Ill_Krunchall_5065:HG3_Ill_scalpel_3673:HG3_Ill_svaba_4648:HG4_Ill_150bpfermikitraw_4850:HG4_Ill_250bpfermikitraw_5108:HG4_Ill_GATKHCSBGrefine_2529:HG4_Ill_GATKHC_6089:HG4_Ill_Krunchall_5343:HG4_Ill_manta_883:HG4_Ill_scalpel_3475:HG4_Ill_svaba_4668:HG4_PB_assemblyticsfalcon_17743;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0444444;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.0451128;PBcalls=12;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-67;DistBack=2454;DistForward=-36;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=73;REFWIDENED=3:125062270-125062409;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2584.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:1/1:0:15:1:27:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr3	126194948	HG2_Ill_GATKHCSBGrefine_2438	AGGGCGGGGCGCGGGGTCGGGGGGCGGGGCGCGGGGTCGGGGGGCGGGGCGCGGGGTCGGGGGGCGGGGCGCGGGGTCGGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2686:HG2_PB_HySA_6886:HG4_PB_HySA_5439:HG3_PB_pbsv_3539:HG3_PB_HySA_5622:HG4_PB_pbsv_3642:HG4_Ill_svaba_4675:HG4_Ill_Krunchall_5350:HG4_Ill_GATKHC_6100:HG4_Ill_GATKHCSBGrefine_2532:HG4_Ill_250bpfermikitraw_5116:HG3_Ill_svaba_4658:HG3_Ill_manta_816:HG3_Ill_Krunchall_5076:HG3_Ill_GATKHC_6066:HG3_Ill_GATKHCSBGrefine_2442:HG3_Ill_250bpfermikitraw_4922:HG2_PB_pbsv_3612:HG2_Ill_svaba_4573:HG2_Ill_Krunchall_5136:HG2_Ill_GATKHC_5992:HG2_Ill_GATKHCSBGrefine_2438:HG4_PB_SVrefine2PBcRDovetail_1867:HG4_Ill_SVrefine2DISCOVARDovetail_2768:HG3_PB_SVrefine2PBcRDovetail_1664:HG3_PB_SVrefine2Falcon1Dovetail_2250:HG2_PB_SVrefine2PBcRplusDovetail_7585:HG2_PB_SVrefine2PB10Xhap12_2648:HG2_Ill_SVrefine2DISCOVARplusDovetail_8804;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2438:HG2_Ill_GATKHC_5992:HG2_Ill_Krunchall_5136:HG2_Ill_svaba_4573:HG2_PB_pbsv_3612:HG3_Ill_250bpfermikitraw_4922:HG3_Ill_GATKHCSBGrefine_2442:HG3_Ill_GATKHC_6066:HG3_Ill_Krunchall_5076:HG3_Ill_manta_816:HG3_Ill_svaba_4658:HG4_Ill_250bpfermikitraw_5116:HG4_Ill_GATKHCSBGrefine_2532:HG4_Ill_GATKHC_6100:HG4_Ill_Krunchall_5350:HG4_Ill_svaba_4675:HG4_PB_pbsv_3642;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0941176;ClusterMaxSizeDiff=0.0941176;ClusterMaxEditDist=0.127168;PBcalls=11;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-80;DistBack=104745;DistForward=-74;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=76;REFWIDENED=3:126194924-126195079;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2585.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:27:1|0:1:25:18:1:./.:0:0:0:0:0/1:10:9:./.:.:.:.:.:.
chr3	126358922	HG3_Ill_scalpel_3684	AGCTGCTTGTGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_493:HG2_PB_pbsv_3615:HG2_PB_HySA_6891:HG4_Ill_Krunchall_5352:HG3_Ill_Krunchall_5079:HG2_Ill_Krunchall_5138:HG4_PB_assemblyticsfalcon_17756:HG2_PB_assemblyticsfalcon_18165:HG3_PB_assemblyticsfalcon_18047:HG2_PB_assemblyticsPBcR_17572:HG3_PB_pbsv_3542:HG3_PB_HySA_5626:HG4_Ill_MetaSV_3473:HG3_Ill_MetaSV_3500:HG2_Ill_tnscope_380:HG2_Ill_MetaSV_3327:HG4_PB_pbsv_3645:HG4_PB_SVrefine2PBcRDovetail_1869:HG4_PB_SVrefine2Falcon1Dovetail_2189:HG4_PB_HySA_5443:HG4_Ill_scalpel_3483:HG4_Ill_manta_884:HG4_Ill_SVrefine2DISCOVARDovetail_2770:HG4_Ill_GATKHCSBGrefine_2534:HG4_10X_allpass_656:HG3_PB_SVrefine2PBcRDovetail_1667:HG3_PB_SVrefine2Falcon1Dovetail_2252:HG3_Ill_scalpel_3684:HG3_Ill_manta_817:HG3_Ill_SVrefine2DISCOVARDovetail_2761:HG3_Ill_GATKHCSBGrefine_2444:HG3_10X_allpass_693:HG2_PB_SVrefine2PBcRplusDovetail_7587:HG2_PB_SVrefine2PB10Xhap12_2650:HG2_PB_SVrefine2Falcon2Bionano_1678:HG2_PB_SVrefine2Falcon1plusDovetail_8178:HG2_Ill_scalpel_3571:HG2_Ill_manta_1025:HG2_Ill_SVrefine2DISCOVARplusDovetail_8806:HG2_Ill_GATKHCSBGrefine_2440:HG2_10X_allpass_560:HG2_10X_SVrefine210Xhap12_2688;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2688:HG2_10X_allpass_560:HG2_Ill_GATKHCSBGrefine_2440:HG2_Ill_SVrefine2DISCOVARplusDovetail_8806:HG2_Ill_manta_1025:HG2_Ill_scalpel_3571:HG2_PB_SVrefine2Falcon1plusDovetail_8178:HG2_PB_SVrefine2Falcon2Bionano_1678:HG2_PB_SVrefine2PB10Xhap12_2650:HG2_PB_SVrefine2PBcRplusDovetail_7587:HG3_10X_allpass_693:HG3_Ill_GATKHCSBGrefine_2444:HG3_Ill_SVrefine2DISCOVARDovetail_2761:HG3_Ill_manta_817:HG3_Ill_scalpel_3684:HG3_PB_SVrefine2Falcon1Dovetail_2252:HG3_PB_SVrefine2PBcRDovetail_1667:HG4_10X_allpass_656:HG4_Ill_GATKHCSBGrefine_2534:HG4_Ill_SVrefine2DISCOVARDovetail_2770:HG4_Ill_manta_884:HG4_Ill_scalpel_3483:HG4_PB_HySA_5443:HG4_PB_SVrefine2Falcon1Dovetail_2189:HG4_PB_SVrefine2PBcRDovetail_1869:HG4_PB_pbsv_3645;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0967239;ClusterMaxSizeDiff=0.0967239;ClusterMaxEditDist=0.0967239;PBcalls=18;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=20135;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:126358923-126359265;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2586.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:73:1/1:0:22:0:15:./.:0:0:0:0:1/1:0:45:./.:2:16:.:.:.
chr3	127413154	HG3_Ill_GATKHC_6075	ATGTGTGTATATATATATGTGTATATATATGTATGTGTATATATATGTGTATATATATGTATGTATATATATG	A	20	PASS	ClusterIDs=HG2_10X_allpass_561:HG2_PB_HySA_6905:HG3_PB_HySA_5641:HG3_PB_pbsv_3551:HG3_Ill_GATKHC_6075:HG3_Ill_GATKHCSBGrefine_2446:HG2_PB_pbsv_3624:HG2_Ill_GATKHC_6001:HG2_Ill_GATKHCSBGrefine_2443;NumClusterSVs=9;ExactMatchIDs=HG2_10X_allpass_561:HG3_PB_pbsv_3551:HG3_Ill_GATKHC_6075:HG3_Ill_GATKHCSBGrefine_2446:HG2_PB_pbsv_3624:HG2_Ill_GATKHC_6001:HG2_Ill_GATKHCSBGrefine_2443;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0136054;ClusterMaxSizeDiff=0.0136054;ClusterMaxEditDist=0.0547945;PBcalls=4;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-72;DistBack=6469;DistForward=-57;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=72;REFWIDENED=3:127413130-127413273;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:47:1|0:10:43:15:0:./.:0:0:0:0:0/1:24:9:./.:.:.:.:.:.
chr3	128173061	HG2_Ill_GATKHCSBGrefine_2444	TCTCCAGAGCCAGGGGAAAAAGATAGAGAAAGCCAGTCCCAGAGAGAGGCAGGGACAAACCTGAGGTCTCCAGCAGGGGGGCCAAGCGGGTCCTGCACC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2695:HG4_PB_assemblyticsfalcon_17766:HG3_PB_assemblyticsfalcon_18059:HG3_PB_HySA_5643:HG2_PB_HySA_6907:HG4_PB_SVrefine2Falcon1Dovetail_2197:HG3_PB_pbsv_3552:HG3_PB_SVrefine2PBcRDovetail_1672:HG3_PB_SVrefine2Falcon1Dovetail_2260:HG3_Ill_svaba_4669:HG3_Ill_scalpel_3690:HG3_Ill_manta_819:HG3_Ill_SVrefine2DISCOVARDovetail_2768:HG3_Ill_Krunchall_5085:HG3_Ill_GATKHC_6076:HG3_Ill_GATKHCSBGrefine_2447:HG3_Ill_250bpfermikitraw_4929:HG3_Ill_150bpfermikitraw_4757:HG3_CG_vcfBeta_2109:HG3_10X_allpass_696:HG2_PB_pbsv_3627:HG2_PB_assemblyticsPBcR_17586:HG2_PB_SVrefine2PBcRplusDovetail_7595:HG2_PB_SVrefine2PB10Xhap12_2659:HG2_PB_SVrefine2Falcon2Bionano_1685:HG2_Ill_svaba_4586:HG2_Ill_scalpel_3577:HG2_Ill_breakscan11_494:HG2_Ill_Krunchall_5145:HG2_Ill_GATKHC_6005:HG2_Ill_GATKHCSBGrefine_2444:HG2_Ill_250bpfermikitraw_5049:HG2_Ill_150bpfermikitraw_4680:HG2_CG_vcfBeta_2186:HG2_10X_allpass_562;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2695:HG4_PB_SVrefine2Falcon1Dovetail_2197:HG3_PB_pbsv_3552:HG3_PB_SVrefine2PBcRDovetail_1672:HG3_PB_SVrefine2Falcon1Dovetail_2260:HG3_Ill_svaba_4669:HG3_Ill_scalpel_3690:HG3_Ill_manta_819:HG3_Ill_SVrefine2DISCOVARDovetail_2768:HG3_Ill_Krunchall_5085:HG3_Ill_GATKHC_6076:HG3_Ill_GATKHCSBGrefine_2447:HG3_Ill_250bpfermikitraw_4929:HG3_Ill_150bpfermikitraw_4757:HG3_CG_vcfBeta_2109:HG3_10X_allpass_696:HG2_PB_pbsv_3627:HG2_PB_assemblyticsPBcR_17586:HG2_PB_SVrefine2PBcRplusDovetail_7595:HG2_PB_SVrefine2PB10Xhap12_2659:HG2_PB_SVrefine2Falcon2Bionano_1685:HG2_Ill_svaba_4586:HG2_Ill_scalpel_3577:HG2_Ill_breakscan11_494:HG2_Ill_Krunchall_5145:HG2_Ill_GATKHC_6005:HG2_Ill_GATKHCSBGrefine_2444:HG2_Ill_250bpfermikitraw_5049:HG2_Ill_150bpfermikitraw_4680:HG2_CG_vcfBeta_2186:HG2_10X_allpass_562;NumExactMatchSVs=31;ClusterMaxShiftDist=0.02;ClusterMaxSizeDiff=0.02;ClusterMaxEditDist=0.0201005;PBcalls=13;Illcalls=17;TenXcalls=3;CGcalls=2;PBexactcalls=9;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=2;HG2count=17;HG3count=16;HG4count=2;NumTechs=4;NumTechsExact=4;SVLEN=-98;DistBack=9170;DistForward=15465;DistMin=9170;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=3:128173062-128173163;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2588.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:27:./.:5:17:9:8:./.:0:0:0:0:0/1:43:13:./.:.:.:.:.:.
chr3	129184467	HG2_Ill_GATKHCSBGrefine_2449	CCACGCCTGGCTAATTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2700:HG2_PB_pbsv_3635:HG4_PB_pbsv_3666:HG2_PB_HySA_6921:HG4_PB_assemblyticsfalcon_17781:HG3_PB_assemblyticsfalcon_18070:HG4_PB_SVrefine2Falcon1Dovetail_2204:HG4_Ill_MetaSV_3478:HG4_Ill_GATKHCSBGrefine_2544:HG2_Ill_MetaSV_3331:HG2_Ill_GATKHCSBGrefine_2449:HG2_10X_allpass_564:HG2_Ill_tnscope_382:HG2_PB_SVrefine2PB10Xhap12_2662:HG2_PB_SVrefine2Falcon1plusDovetail_8187;NumClusterSVs=15;ExactMatchIDs=HG2_10X_allpass_564:HG2_Ill_GATKHCSBGrefine_2449:HG2_Ill_MetaSV_3331:HG4_Ill_GATKHCSBGrefine_2544:HG4_Ill_MetaSV_3478:HG4_PB_SVrefine2Falcon1Dovetail_2204;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0161551;ClusterMaxSizeDiff=0.0161551;ClusterMaxEditDist=0.0324675;PBcalls=8;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=489;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=43;REFWIDENED=3:129184444-129184796;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:33:0|1:38:1:0:28:./.:0:0:0:0:0/1:26:16:0/1:19:5:.:.:.
chr3	130347566	HG2_PB_SVrefine2PBcRplusDovetail_7603	TAAGATCGTGTCGAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCTGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACACAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCACGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACAAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACCAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATAAACTAGAAAATCTGGAAGAAACGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAATGCCAGTTACATTCTAAATCCCTGTAGCAGCATTTCAGGGAAACAGTTTGTCAATATTACTTTCCTTTGTCAAATCCGTGAAATAGCAGTTGATTTCTTAAAATAAATCTCAAGCTATAAAATGTTAAAAAAAAAAATAAATAAATAAATAAATAAATAAATAAATAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_496:HG2_10X_allpass_567:HG2_PB_assemblyticsPBcR_17601:HG3_10X_allpass_701:HG3_Ill_Krunchall_5096:HG2_Ill_Krunchall_5164:HG2_Ill_tnscope_384:HG3_PB_pbsv_3568:HG3_PB_SVrefine2PBcRDovetail_1683:HG3_Ill_MetaSV_3507:HG3_Ill_GATKHCSBGrefine_2453:HG2_PB_pbsv_3642:HG2_PB_SVrefine2PBcRplusDovetail_7603:HG2_PB_SVrefine2PB10Xhap12_2669:HG2_PB_SVrefine2Falcon1plusDovetail_8193:HG2_Ill_MetaSV_3335:HG2_Ill_GATKHCSBGrefine_2453;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2453:HG2_Ill_MetaSV_3335:HG2_PB_SVrefine2Falcon1plusDovetail_8193:HG2_PB_SVrefine2PB10Xhap12_2669:HG2_PB_SVrefine2PBcRplusDovetail_7603:HG2_PB_pbsv_3642:HG3_Ill_GATKHCSBGrefine_2453:HG3_Ill_MetaSV_3507:HG3_PB_SVrefine2PBcRDovetail_1683:HG3_PB_pbsv_3568;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00379198;ClusterMaxSizeDiff=0.00379198;ClusterMaxEditDist=0.00379198;PBcalls=7;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-5542;DistBack=38408;DistForward=-5532;DistMin=-5532;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=3:130347567-130353119;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2590.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:51:0|1:39:0:0:26:./.:0:0:0:0:0/1:34:14:0/1:380:183:5510:.:.
chr3	133221083	HG2_Ill_250bpfermikitraw_5091	GAAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGAAGGAAGGAAGGAAGGAAGAAAGA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_5091:HG2_PB_HySA_6970:HG4_Ill_svaba_4722:HG3_Ill_svaba_4705:HG3_Ill_Krunchall_5124:HG3_Ill_GATKHC_6135:HG3_Ill_250bpfermikitraw_4963:HG2_Ill_svaba_4627:HG2_Ill_Krunchall_5187:HG2_Ill_GATKHC_6065:HG2_Ill_250bpfermikitraw_5092:HG2_PB_PB10Xdip_19944:HG4_PB_assemblyticsfalcon_17812:HG3_PB_assemblyticsfalcon_18109:HG2_PB_assemblyticsPBcR_17626:HG4_PB_HySA_5504:HG4_Ill_svaba_4721:HG4_Ill_Krunchall_5395:HG4_Ill_GATKHC_6161:HG4_Ill_GATKHCSBGrefine_2558:HG4_Ill_250bpfermikitraw_5163:HG2_PB_assemblyticsfalcon_18222:HG2_Ill_Krunchall_5186:HG2_Ill_GATKHC_6064:HG2_Ill_GATKHCSBGrefine_2460;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5091:HG4_Ill_svaba_4721:HG4_Ill_Krunchall_5395:HG4_Ill_GATKHC_6161:HG4_Ill_GATKHCSBGrefine_2558:HG4_Ill_250bpfermikitraw_5163:HG2_PB_assemblyticsfalcon_18222:HG2_Ill_Krunchall_5186:HG2_Ill_GATKHC_6064:HG2_Ill_GATKHCSBGrefine_2460;NumExactMatchSVs=10;ClusterMaxShiftDist=0.151261;ClusterMaxSizeDiff=0.151261;ClusterMaxEditDist=0.151261;PBcalls=7;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=35561;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=111;REFWIDENED=3:133220980-133221148;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:0/1:13:37:1/1:1:11:5:16:./.:0:0:0:0:1/1:0:16:./.:.:.:.:.:.
chr3	133686652	HG4_PB_SVrefine2PBcRDovetail_1886	CACCCCACCCCACCTCCATACCCCCCACACATGAACACACGCTTCCCCCTCACAGGCACCCCACCCCACCTCCACACCCCCACACACTTCCCCCGACATGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2718:HG4_PB_assemblyticsfalcon_17815:HG2_PB_assemblyticsfalcon_18225:HG2_PB_assemblyticsPBcR_17629:HG4_PB_SVrefine2Falcon1Dovetail_2220:HG2_PB_SVrefine2Falcon1plusDovetail_8203:HG2_PB_HySA_6974:HG4_PB_pbsv_3688:HG4_PB_SVrefine2PBcRDovetail_1886:HG4_Ill_svaba_4724:HG4_Ill_scalpel_3518:HG4_Ill_SVrefine2DISCOVARDovetail_2792:HG4_Ill_GATKHC_6164:HG2_PB_pbsv_3656:HG2_PB_SVrefine2PBcRplusDovetail_7613:HG2_PB_SVrefine2PB10Xhap12_2683:HG2_Ill_svaba_4630:HG2_Ill_scalpel_3617:HG2_Ill_GATKHC_6069;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2718:HG4_PB_pbsv_3688:HG4_PB_SVrefine2PBcRDovetail_1886:HG4_Ill_svaba_4724:HG4_Ill_scalpel_3518:HG4_Ill_SVrefine2DISCOVARDovetail_2792:HG4_Ill_GATKHC_6164:HG2_PB_pbsv_3656:HG2_PB_SVrefine2PBcRplusDovetail_7613:HG2_PB_SVrefine2PB10Xhap12_2683:HG2_Ill_svaba_4630:HG2_Ill_scalpel_3617:HG2_Ill_GATKHC_6069;NumExactMatchSVs=13;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.0196078;ClusterMaxEditDist=0.0492611;PBcalls=11;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-100;DistBack=-202;DistForward=36184;DistMin=-202;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=103;REFWIDENED=3:133686629-133686831;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:25:0|1:19:0:1:23:./.:0:0:0:0:0/1:5:6:./.:.:.:.:.:.
chr3	134673902	HG4_10X_allpass_661	TGACATCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTAATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCAACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3340:HG4_PB_assemblyticsfalcon_17828:HG3_PB_assemblyticsfalcon_18123:HG2_PB_assemblyticsfalcon_18235:HG2_PB_assemblyticsPBcR_17642:HG4_Ill_Krunchall_5410:HG3_Ill_Krunchall_5139:HG4_Ill_Spiral_306:HG3_Ill_Spiral_4019:HG2_Ill_breakscan11_497:HG3_PB_pbsv_3589:HG2_Ill_tnscope_386:HG4_PB_pbsv_3693:HG4_PB_SVrefine2PBcRDovetail_1889:HG4_PB_SVrefine2Falcon1Dovetail_2223:HG4_Ill_MetaSV_3485:HG4_Ill_GATKHCSBGrefine_2562:HG4_10X_allpass_661:HG3_PB_SVrefine2PBcRDovetail_1696:HG3_PB_SVrefine2Falcon1Dovetail_2277:HG3_Ill_SVrefine2DISCOVARDovetail_2804:HG3_Ill_MetaSV_3511:HG3_Ill_GATKHCSBGrefine_2480:HG3_10X_allpass_707:HG2_PB_pbsv_3661:HG2_PB_SVrefine2PBcRplusDovetail_7617:HG2_PB_SVrefine2Falcon2Bionano_1705:HG2_PB_SVrefine2Falcon1plusDovetail_8207:HG2_Ill_SVrefine2DISCOVARplusDovetail_8843:HG2_Ill_GATKHCSBGrefine_2464:HG2_10X_allpass_570:HG2_10X_SVrefine210Xhap12_2722;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2722:HG2_10X_allpass_570:HG2_Ill_GATKHCSBGrefine_2464:HG2_Ill_SVrefine2DISCOVARplusDovetail_8843:HG2_PB_SVrefine2Falcon1plusDovetail_8207:HG2_PB_SVrefine2Falcon2Bionano_1705:HG2_PB_SVrefine2PBcRplusDovetail_7617:HG2_PB_pbsv_3661:HG3_10X_allpass_707:HG3_Ill_GATKHCSBGrefine_2480:HG3_Ill_MetaSV_3511:HG3_Ill_SVrefine2DISCOVARDovetail_2804:HG3_PB_SVrefine2Falcon1Dovetail_2277:HG3_PB_SVrefine2PBcRDovetail_1696:HG4_10X_allpass_661:HG4_Ill_GATKHCSBGrefine_2562:HG4_Ill_MetaSV_3485:HG4_PB_SVrefine2Falcon1Dovetail_2223:HG4_PB_SVrefine2PBcRDovetail_1889:HG4_PB_pbsv_3693;NumExactMatchSVs=20;ClusterMaxShiftDist=0.136664;ClusterMaxSizeDiff=0.136664;ClusterMaxEditDist=0.136664;PBcalls=14;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-653;DistBack=-654;DistForward=-640;DistMin=-654;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=3:134673903-134674569;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2593.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:37:0|1:25:0:1:29:./.:0:0:0:0:0/1:45:20:0/1:57:13:.:.:.
chr3	136021014	HG3_PB_SVrefine2PBcRDovetail_1699	TCCTGCAAGCTGTGTGCAAACTGCTGCAGGAACACTTGCGGAAATATCTGTCATGGAGCTGGGGTGGGGGATGGGTAGCTGCTACTATGCTAAGAGCTGAAATTAACTCCAATTTTCAGTCCAATCCTTCCCCTGGAAGTTGCAGTCTTTCAACAGACGCCAGAGTCAAAATAGTTCCATCAGACAGATTCTGCCAGGCAATTGTTGCCTGGGTGGGGAGACAGATTCCTGGTGCTTCCTACTCTGCCATCTTCTAACTTTTTCTTAAGGTACATATGATAACTCTTGATTCTCATTATAAAGTTTTATATCCTGCTACCTATTAAATACTCTTGTTTGTAATTTTTTTCTGTCATTTATTTAGGGTTTTATTTTATTTATTTATTTTTATTTTATTTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACAATGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGTGCTGCACCTGTTAACTCGTCATTTAGCATTAGGTATATCTCCTAATGCTATCCCTCCCCCCTCCCCCAACCCCACAACAGTCCCCAGAGTGTGGTATTTAGGGTTTTAAAAATGTGGTTGTATACTGTCTATGTATAAATAAGAGTTCTGTCGGGTGCAGGGGCTCATGCCTATAATCCCAATGCTTTGGGAGGCTAAGGCAGGAGGATCCTTTCATGCCAGGAGCTCAAAACCAGCCTGGACAACATAATGAGTCACCATCTCTATAAAAAGTAAAAAAATTTGCTGGGTGAGGTGGCTGTCGCCTGTAGTCCCATTTACTTGGGAGGCTGAGATGGGAGGATTGCTTGAACCCAGGTGTTTGAGGCTGTTCTGAGTTATGATCATTGCCACTGCACTCCATCCTGGTGTGCAAGACTCCATCGCCAAAAATAAGTAAATGAATAAAATTTTATCTTTCCAGTTATTTTACATGTCATTTCTTTCCTTGTCTTGCATTGGCTACAACTCCCTATATGTCAAATGTAATGGTGAATCATAGTTGTGATTCTGGGCATCTTTGTATTGTTTGTAAGTTTAGCAAGACTGCTGTCAGTGTTTCCTAATTTATATCTTTTTTCATGTTGAAGCTACTACTGGCTTCTGTTTTAAATATTTTTGTTGTTGTTTATTTTGTTCTTAAAGTTAGGAATGAGTGTTGAATATTGTTGAATGCACTTTCAGTGTTTTTGGAGATGATCATGTGATTTTCTTCCTTAGATCTATTTATAAATCTATCCTAGTAGATTTCTGAATACTAAACTTCCTTCATTCCTGAAGTTGTATATTCTGTTTGCTAATGTTTTGAGTTTCTGCATTGATATTATGTGATACTAGTGCGTATATTTTAAGGTATTTTAAAATCAGGTTTTGGTATCGATGTTGTATTTGCTTTACTTATTTATTTATTTAAAAAAAATTTTTTTTTGAGACAGAGTTTTGCTCTTGTCACCCAAGCTGGAATGCGGTGGCACAATCTCTACTCACTGCAACCCCTGCCTCCTGGGTTCAACCAATTCTCCTGCATCAGACTCCCAAGTAGCTGGGATTACAGGCGAGCCCTACCATGTCCGGCTAATTTTTGTACTTTTAGTAGAGACACGGTTTCGCCATGTTGGCCAGGCTGGTCTTGAACTTCTGACCTCAGGTGATCCACCTGCCTTGGCCCCACAAAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCTGGCCTGTATTTGCTTTATGTATTAGTGTTCTAGTGCTGCCATAAGAAAATACCATAAACTGCATAGCTTAAACAACAGAAATTTATTTTCTGTCAGTTCTGGAGGCTAGAAGTCCAAGATCATGGTGTTGGCAGGGTTGGCTTCATTCTGAGGTCTGTGTCTCTTTGGCTTCTGGACTACACTCTTGCTGTGTCCTCACGAGGTCTTTGCTCTCAGTGCATGCAGAAAGAGATCTCTGGTATCTCTTCGTCTTTTTTTTTTTTTTTTCCCTCAGAGACAGGGTCTTGCTTTGTCACCCAGGCTGGAGTGCAGCGGTGTGACTTTGACTCACTGCAGGCTTGACCTCCTGTGCTCAAGTGATCTTCCCACTTCAGCCTCCTGAGTAGCTGGGACTATAGCTGCATGCCACCACATCTGGCTAATTTTAAAATTTTTTGTAGAGATGGCAACTCACTATGTTGCCCAGGCTGGCTTTTCCAATTATTTATTTATTTTTTTTTGAGTTGGAGTCTGGCTCTGTCGCCCGGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTACACGCCATTCTCCTGCCTCAGCCACCCAAGTAGCAGGGACTACAGGCACCCACCACCATGCCTGGCTAATTTTGTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATAGTCTCGATCTCCCGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAAGTGTTGGGATTACAGATGTGAGCCACTGTGCCCGGCTGGCTTTCCAATTCTTTTCTTTTTTTTGAGATGGAGTCTCACTCTGTCGCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTTAGTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAACCTCCTGAATAGCTGTGATTTCAGGCACCCGCCACCACGCTTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTTGCCAGGATGGTCTTGATCTCCTGACCTCATGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACGGGCGCCAACCCAGCTTTTCCAATTTTTAAAAGAATTCCAGTCCTAACAGATTAGGGTCCCCCTCTTATGGCCCCGTTTAACTTTAATTACCTCTGGAACATCCCTCTCTCCAAATTCACTTTTTTTTTTCTTTGAGACAGAGTCTAACTCTGTTGCCCAGGCCAGTGTGCAGTGGCGAGATCACGGCTCATTGCAACTTCCACCTTCCAGGTTCAGGAGATGCTTCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGTGTGTGCCACCATGCCTGGCTAATTTTTGTATTTTTAGAGATGGGGTTTCGCCATGTTGGCCAGGCTGGTCTCAAACTCCTGGCTTCAAGTGATCCACTTGCCTCGGCCTCCCAAACTACTGGCATTAGAGGTGTAAGCCACTGCACCTAGACCATATATTTACTTTTAACTCAAAAAGTATTGTATTATTACACTTTTTTATTTTGCTTTTTAAAAAAACTTCTTCTGGCCGGGCGTGGTGGCTCATGCCTGTAATTCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCTTGACCAACACGGTGAAAACCTGTCTCTATTGAAAATACAAAAATTAGCCGGGTGTGGTGGTGTGTCCCTGTAATCCCAGCTACTGGAGAGACTGAGGCAGGAGAATCACTTAAACTGGGGAGGCACAGGTTGCAATGAGCTGAGATTGCACCATTGCATTTCAGCCTGGGCGATGAGTGAAACTGTCTCTAAAAAAAAAAAAAAAGAAAGAAAAAAAGTGAATATGCTAGAAAAGAGTCAAAGCAGTGACTTTAGAAGCTACTTAAGAGTGCACACACAAATCAATACGGTAGTCAGGGGAAGGCATTACTTCTGGGGAAGAAGAGTACAAAGGAAAGAGAGAGGTACCTTTGGAAATTGTGAAGGGAAAATGAAGCAAGGGGGTTACATTTATGTACCTGCAAGACATACAAAATCGAATACACTGAAGGACACTACATCTTTCCCCATCACCCTCCCTAAAATTAGTCACCCATGAACTAAACTGCACTTTGCTATACTGACAGAAGAGGGTGCTCTTGAACTAGGATTTTTGTTCATTTGTTCATCTGCCAGCTTTGGAGAATGCAGATACAAATAGTTTTCATTTATATAAAGCTACAATAAGAAAACAAAAAGTGAGAATGAAACATGTCAGTTGATGGAACTCCCTTCACTGTAAAAGTCAATCATGAAGCAGCTGACTATGCTTCAATCTGAGTGCAGTAGCCCCTGATAAGCATTTGAGGTTGTAAAAATAGAAAATTCAGAAACTAATGACAAGATGGAGAGATAATAGTAAGAAGTTAAAGCTGATTGAATTAAGAAAATGGGCAGGGGAGACAAAATTGCATCAGAAATGATATCAAAATTGCAAGGTGCTCAAAGGAGAATGTATTTCAATGAAAATTTAATAAGGAACATTAAAGAAAAGTAGATAAATAGCCTAAAAAATGAATGAAATAATATAAAAAAGTAAAAGTAGATTTTACATTCTCACCACAAAAAAGTATGTGAGGTGGTGGATATGTTAACTAGCTTTAGTCATCCTACACTGTATACATATATGAAAACATGTACGTTGTACATATATGCAATTATAAAATTTTAAAATAGTACAGATACCTTTAATACAATTATTGGTTATATTGTCACATCTGGGATTAATTTTTTAAAATTCTTAGTTAAATGTATGAGAAAAAAGTGACTACAATGAAAGGCAAAGAAGAATGAACATACATATAATTGGAGTGTCTGAAGAAAAACCAGTAGAACAGACTTAATATTTAAAACTGTAATCCAAGAAAATAGTCCAGAAATAAAATAAGATTCAGATTTATATAATGAAAGAGCACACTGAGCACGTGGGAAAATTGACCCAGAATTGTCAAACTAGAGAAAATATTAACTGTTCGATTTTTAAAATAAGGAGAAATACTCAGGACCTTTGGGCAGAAATCAAATGACTTACAAGGGCAAGAGAATAAAATGGCATCCAACTTCTCCAAAGCAACGTAGAAAAGCAAGGAAACAACAGAAAAGCACTTTCAGGAGGCTGAAGGAAAGAATCTGTGACTAAGGATTTTATGTTTAGCAAAGCTCACCTTCATGTATTAAGACTGCAGAAAACCAGTTTTAAACCAAGAACCGAGGGAAGTTTGTGTTAATGAGGCTTTCTTGAGGAATCTACTAGAGAATGAGCTTTATCCAATCAAGAGGTAGCTGGAGAAATTTCAACAAAAGGATTGGTAGTGATTATCTAATATACTTAATTATAATTCTAAGACTAAAACAGAAGTGGGGATGAGGGTAGAGAACAATG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8210:HG4_PB_pbsv_3698:HG2_Ill_tnscope_387:HG3_PB_pbsv_3594:HG2_PB_pbsv_3664:HG4_PB_assemblyticsfalcon_17837:HG4_PB_SVrefine2PBcRDovetail_1893:HG4_PB_SVrefine2Falcon1Dovetail_2226:HG4_Ill_SVrefine2DISCOVARDovetail_2803:HG3_PB_assemblyticsfalcon_18130:HG3_PB_SVrefine2PBcRDovetail_1699:HG3_PB_SVrefine2Falcon1Dovetail_2280:HG3_Ill_SVrefine2DISCOVARDovetail_2812:HG2_PB_SVrefine2PBcRplusDovetail_7620:HG2_PB_SVrefine2PB10Xhap12_2692:HG2_Ill_SVrefine2DISCOVARplusDovetail_8848:HG2_10X_SVrefine210Xhap12_2730:HG4_Ill_MetaSV_3486:HG3_Ill_MetaSV_3512:HG2_Ill_breakscan11_498:HG2_10X_allpass_571:HG3_Ill_Krunchall_5146:HG2_Ill_Krunchall_5214:HG3_10X_allpass_708:HG2_PB_assemblyticsPBcR_17646:HG2_Ill_MetaSV_3341:HG2_PB_assemblyticsfalcon_18240;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2730:HG2_Ill_SVrefine2DISCOVARplusDovetail_8848:HG2_PB_SVrefine2PB10Xhap12_2692:HG2_PB_SVrefine2PBcRplusDovetail_7620:HG3_Ill_SVrefine2DISCOVARDovetail_2812:HG3_PB_SVrefine2Falcon1Dovetail_2280:HG3_PB_SVrefine2PBcRDovetail_1699:HG3_PB_assemblyticsfalcon_18130:HG4_Ill_SVrefine2DISCOVARDovetail_2803:HG4_PB_SVrefine2Falcon1Dovetail_2226:HG4_PB_SVrefine2PBcRDovetail_1893:HG4_PB_assemblyticsfalcon_17837;NumExactMatchSVs=12;ClusterMaxShiftDist=0.000771307;ClusterMaxSizeDiff=0.000771307;ClusterMaxEditDist=0.000771307;PBcalls=14;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-5185;DistBack=2590;DistForward=-5186;DistMin=-5186;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:136021014-136026199;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2594.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:62:40:0|1:39:4:4:15:./.:0:0:0:0:0/1:49:20:0/1:345:184:5140:.:.
chr3	136433800	HG2_Ill_scalpel_3632	TATATATTTTATATATATATTTTTATATATATATTTTATATATATAATATATATATAAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_6997:HG3_Ill_svaba_4725:HG3_Ill_scalpel_3737:HG3_Ill_150bpfermikitraw_4822:HG2_Ill_svaba_4649:HG2_Ill_scalpel_3632:HG2_Ill_manta_1039:HG2_10X_allpass_572:HG3_Ill_GATKHC_6162:HG2_Ill_GATKHC_6094:HG2_PB_pbsv_3665:HG3_PB_pbsv_3595;NumClusterSVs=12;ExactMatchIDs=HG2_10X_allpass_572:HG2_Ill_manta_1039:HG2_Ill_scalpel_3632:HG2_Ill_svaba_4649:HG3_Ill_150bpfermikitraw_4822:HG3_Ill_scalpel_3737:HG3_Ill_svaba_4725;NumExactMatchSVs=7;ClusterMaxShiftDist=0.360656;ClusterMaxSizeDiff=0.360656;ClusterMaxEditDist=0.360656;PBcalls=3;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-58;DistBack=-7;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=41;REFWIDENED=3:136433768-136433866;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:25:0|1:21:3:4:14:./.:0:0:0:0:0/1:16:5:./.:.:.:.:.:.
chr3	139425868	HG4_Ill_GATKHC_6210	GAGAGAGGACGCAGACAAGAGTTTTGGGAAGATTTCTGACATCTGTGAGGGGAAGGCTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2738:HG4_PB_HySA_5537:HG2_PB_pbsv_3675:HG2_PB_HySA_7014:HG4_Ill_svaba_4761:HG4_Ill_scalpel_3545:HG4_Ill_manta_895:HG4_Ill_Krunchall_5442:HG4_Ill_GATKHC_6210:HG4_Ill_GATKHCSBGrefine_2573:HG4_Ill_250bpfermikitraw_5201:HG4_Ill_150bpfermikitraw_4943:HG4_10X_allpass_664:HG2_Ill_svaba_4662:HG2_Ill_scalpel_3639:HG2_Ill_manta_1041:HG2_Ill_breakscan11_499:HG2_Ill_SpiralSDKrefine_11465:HG2_Ill_Krunchall_5228:HG2_Ill_GATKHC_6111:HG2_Ill_GATKHCSBGrefine_2473:HG2_Ill_250bpfermikitraw_5132:HG2_Ill_150bpfermikitraw_4765:HG4_PB_pbsv_3710;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4765:HG2_Ill_250bpfermikitraw_5132:HG2_Ill_GATKHCSBGrefine_2473:HG2_Ill_GATKHC_6111:HG2_Ill_Krunchall_5228:HG2_Ill_SpiralSDKrefine_11465:HG2_Ill_breakscan11_499:HG2_Ill_manta_1041:HG2_Ill_scalpel_3639:HG2_Ill_svaba_4662:HG4_10X_allpass_664:HG4_Ill_150bpfermikitraw_4943:HG4_Ill_250bpfermikitraw_5201:HG4_Ill_GATKHCSBGrefine_2573:HG4_Ill_GATKHC_6210:HG4_Ill_Krunchall_5442:HG4_Ill_manta_895:HG4_Ill_scalpel_3545:HG4_Ill_svaba_4761;NumExactMatchSVs=19;ClusterMaxShiftDist=0.162162;ClusterMaxSizeDiff=0.162162;ClusterMaxEditDist=0.183486;PBcalls=4;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-58;DistBack=110089;DistForward=50796;DistMin=50796;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=3:139425818-139425946;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2597.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:35:0|1:37:1:1:33:./.:0:0:0:0:0/1:17:14:./.:.:.:.:.:.
chr3	140208854	HG4_Ill_GATKHCSBGrefine_2580	ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	A	20	PASS	ClusterIDs=HG4_PB_HySA_5543:HG3_PB_HySA_5729:HG2_PB_HySA_7023:HG3_PB_pbsv_3604:HG2_PB_pbsv_3678:HG3_10X_allpass_711:HG4_PB_assemblyticsfalcon_17857:HG4_Ill_GATKHC_6214:HG4_Ill_GATKHCSBGrefine_2580:HG3_PB_assemblyticsfalcon_18153:HG2_PB_assemblyticsfalcon_18258:HG2_Ill_GATKHC_6114:HG2_Ill_GATKHCSBGrefine_2480:HG3_Ill_GATKHCSBGrefine_2495:HG2_PB_assemblyticsPBcR_17666:HG4_PB_pbsv_3714;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2480:HG2_Ill_GATKHC_6114:HG2_PB_assemblyticsfalcon_18258:HG3_PB_assemblyticsfalcon_18153:HG4_Ill_GATKHCSBGrefine_2580:HG4_Ill_GATKHC_6214:HG4_PB_assemblyticsfalcon_17857;NumExactMatchSVs=7;ClusterMaxShiftDist=0.124138;ClusterMaxSizeDiff=0.124138;ClusterMaxEditDist=0.137931;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-72;DistBack=28005;DistForward=29333;DistMin=28005;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=3:140208853-140208932;PctSeqSimilarity=0.9718;PctSizeSimilarity=0.9444;PctRecOverlap=0.9452;SizeDiff=4;StartDistance=0;EndDistance=4;GTMatch=0;TruScore=95;MatchId=2598.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:./.:0:8:0:2:./.:0:0:0:0:./.:0:7:./.:.:.:.:.:.
chr3	141329183	HG4_Ill_250bpfermikitraw_5217	ATATATATTTATATTTATATATTATATATTTATATTTATATATTATATATTTATATTTATATAT	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8870:HG4_Ill_svaba_4777:HG2_PB_HySA_7031:HG2_PB_assemblyticsfalcon_18267:HG4_Ill_Krunchall_5457:HG4_Ill_GATKHCSBGrefine_2582:HG4_Ill_250bpfermikitraw_5217:HG2_Ill_svaba_4672:HG2_Ill_SpiralSDKrefine_11472:HG2_Ill_GATKHCSBGrefine_2483:HG2_Ill_250bpfermikitraw_5147:HG2_PB_pbsv_3682:HG4_PB_pbsv_3719:HG4_Ill_SVrefine2DISCOVARDovetail_2839:HG2_PB_SVrefine2Falcon2Bionano_1719;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5147:HG2_Ill_GATKHCSBGrefine_2483:HG2_Ill_SpiralSDKrefine_11472:HG2_Ill_svaba_4672:HG4_Ill_250bpfermikitraw_5217:HG4_Ill_GATKHCSBGrefine_2582:HG4_Ill_Krunchall_5457:HG4_Ill_svaba_4777;NumExactMatchSVs=8;ClusterMaxShiftDist=0.126984;ClusterMaxSizeDiff=0.126984;ClusterMaxEditDist=0.215385;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-63;DistBack=10574;DistForward=41;DistMin=41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=147;REFWIDENED=3:141329132-141329341;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2599.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:28:0|1:37:4:3:21:./.:0:0:0:0:0/1:17:22:./.:.:.:.:.:.
chr3	144108805	HG3_Ill_250bpfermikitraw_5028	TATATATGTATATATTTGTACAAATATATGTATATATTTGTACAAATATATGTATATATTTGTACAAATATATGTATATATTTGTACAAATATATGTATATATTTGTACAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_3693:HG4_PB_assemblyticsfalcon_17881:HG3_PB_assemblyticsfalcon_18176:HG2_PB_assemblyticsfalcon_18287:HG2_PB_assemblyticsPBcR_17691:HG4_PB_pbsv_3730:HG3_Ill_Krunchall_5189:HG2_PB_HySA_7055:HG2_Ill_Krunchall_5259:HG4_Ill_GATKHC_6250:HG4_Ill_GATKHCSBGrefine_2594:HG3_Ill_GATKHC_6208:HG3_Ill_GATKHCSBGrefine_2504:HG2_Ill_GATKHC_6151:HG2_Ill_GATKHCSBGrefine_2490:HG2_10X_SVrefine210Xhap12_2755:HG4_PB_SVrefine2PBcRDovetail_1908:HG4_PB_SVrefine2Falcon1Dovetail_2244:HG4_Ill_SVrefine2DISCOVARDovetail_2853:HG3_PB_SVrefine2PBcRDovetail_1717:HG3_PB_SVrefine2Falcon1Dovetail_2301:HG3_Ill_SVrefine2DISCOVARDovetail_2843:HG2_PB_SVrefine2PBcRplusDovetail_7637:HG2_PB_SVrefine2PB10Xhap12_2710:HG2_PB_SVrefine2Falcon2Bionano_1726:HG2_PB_SVrefine2Falcon1plusDovetail_8233:HG2_Ill_SVrefine2DISCOVARplusDovetail_8886:HG2_10X_SVrefine210Xhap12_2754:HG4_Ill_manta_901:HG3_Ill_manta_836:HG2_Ill_manta_1045:HG2_Ill_SpiralSDKrefine_11488:HG4_Ill_MetaSV_3496:HG3_PB_HySA_5757:HG3_PB_pbsv_3620:HG4_PB_HySA_5568:HG4_Ill_svaba_4797:HG4_Ill_250bpfermikitraw_5239:HG4_Ill_150bpfermikitraw_4984:HG3_Ill_svaba_4770:HG3_Ill_MetaSV_3521:HG3_Ill_250bpfermikitraw_5028:HG3_Ill_150bpfermikitraw_4868:HG3_10X_allpass_714:HG2_Ill_svaba_4693:HG2_Ill_MetaSV_3345:HG2_Ill_250bpfermikitraw_5168:HG2_Ill_150bpfermikitraw_4792;NumClusterSVs=48;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4792:HG2_Ill_250bpfermikitraw_5168:HG2_Ill_MetaSV_3345:HG2_Ill_svaba_4693:HG3_10X_allpass_714:HG3_Ill_150bpfermikitraw_4868:HG3_Ill_250bpfermikitraw_5028:HG3_Ill_MetaSV_3521:HG3_Ill_svaba_4770:HG4_Ill_150bpfermikitraw_4984:HG4_Ill_250bpfermikitraw_5239:HG4_Ill_svaba_4797:HG4_PB_HySA_5568;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.100917;PBcalls=18;Illcalls=27;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=15;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-110;DistBack=63531;DistForward=34639;DistMin=34639;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=53;REFWIDENED=3:144108806-144108968;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2600.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:./.:0:0:0:1:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr3	144888449	HG2_Ill_MetaSV_3348	CAGCTCATCTCTAGCTAAAAAAAATAAGAGTTACTATGATTTGCTACAAAATTGTTGCTTTAAAAAATTCAACAGTGACCAAAACACTCAGCTTTCATTATACTGAAGATAATTTGTACTGAGTATTCTTTGTTTTTCTAACAATCTCATTAATCTTTATCTTATTTAATTATAGCTTTGAATTTAGCTTAAGAATGTAAAAATTTCCAATTTTGGAGCAAAAATGGAAATTATAGGATAATTTTATGTAGACAAGTTGAAACTTACTCTGTGAATACAAAAAAATCTAAAATATCCAGTTTCTAGTACCACTGTCTTAGCAGTTATCAGAAATGTGAGTTATATATCATATGGTTCCTCTTTATTTGTGCAGACTTGACAATATTTAGAACTAGAATAATTAAATCAATTTTAACAGAAAAATGCAAAATTACCACTAAAATACTGTGTGTATGTAGTGCA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_3626:HG2_PB_pbsv_3698:HG2_Ill_tnscope_391:HG4_PB_assemblyticsfalcon_17892:HG4_PB_SVrefine2Falcon1Dovetail_2250:HG4_Ill_Cortex_2480:HG3_PB_SVrefine2PBcRDovetail_1722:HG3_PB_SVrefine2Falcon1Dovetail_2307:HG3_Ill_manta_839:HG3_Ill_GATKHCSBGrefine_2512:HG3_Ill_Cortex_2496:HG3_10X_allpass_717:HG2_PB_assemblyticsfalcon_18293:HG2_PB_SVrefine2Falcon2Bionano_1729:HG2_PB_SVrefine2Falcon1plusDovetail_8237:HG2_Ill_manta_1049:HG2_Ill_breakscan11_501:HG2_Ill_SpiralSDKrefine_11494:HG2_Ill_SVrefine2DISCOVARplusDovetail_8890:HG2_Ill_MetaSV_3348:HG2_Ill_GATKHCSBGrefine_2497:HG2_Ill_Cortex_5835:HG2_10X_allpass_575:HG2_10X_SVrefine210Xhap12_2758:HG3_PB_assemblyticsfalcon_18185:HG2_Ill_Krunchall_5267:HG2_Ill_Spiral_258;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2758:HG2_10X_allpass_575:HG2_Ill_Cortex_5835:HG2_Ill_GATKHCSBGrefine_2497:HG2_Ill_MetaSV_3348:HG2_Ill_SVrefine2DISCOVARplusDovetail_8890:HG2_Ill_SpiralSDKrefine_11494:HG2_Ill_breakscan11_501:HG2_Ill_manta_1049:HG2_PB_SVrefine2Falcon1plusDovetail_8237:HG2_PB_SVrefine2Falcon2Bionano_1729:HG2_PB_assemblyticsfalcon_18293:HG3_10X_allpass_717:HG3_Ill_Cortex_2496:HG3_Ill_GATKHCSBGrefine_2512:HG3_Ill_manta_839:HG3_PB_SVrefine2Falcon1Dovetail_2307:HG3_PB_SVrefine2PBcRDovetail_1722:HG4_Ill_Cortex_2480:HG4_PB_SVrefine2Falcon1Dovetail_2250:HG4_PB_assemblyticsfalcon_17892;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00868621;ClusterMaxSizeDiff=0.00867679;ClusterMaxEditDist=0.0564604;PBcalls=10;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-461;DistBack=-460;DistForward=-462;DistMin=-462;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:144888450-144888910;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:39:0|1:48:3:1:34:./.:0:0:0:0:0/1:62:21:0/1:27:8:.:.:.
chr3	145644969	HG2_PB_assemblyticsfalcon_18304	TCTTTGAGAGCTATCCTATCTTACAATACTGAAAAACTATTGAGGATAAGCAAAAGACAATGTTAGAAGATAGAACACAAATAAATGTAAAGAAGATTGATAAACAAGGAACATAAATAGGATGTGGTAGGGTATAGGGTGCCAGTGCACATCTGGGGAAAGAGAGGTTTTGGTAAGAAAATTGTTGCAATAACAATGGACTGAAAATAAAAAGTGAAACGTATTTCAACACAGGAATTTATTTCAAATGAGTAACTTATGGGTAATTTATCATTGATCAATTTTCTGATTTTGATTAAATTATAAAAAGACATTGAAAAGGCAAAAAAGAAAGAGAGAGAGAGAGAAAGAGAGAAGAGTGGAGAGAGATTACTGGGCATCCTATGGTGTCCACCACAGGTTGTCCCAATCTATAGATATCTGCACCTTTTCATTTTTGGATTATTTTTTGACTCTGTATATTGTAGAATCCTAATTGCATCATAAACAGTTCTTGTCCTTGGAGATGTAAATGAATTTTGTCTGGAGGAAATAAAACAATTCTCCTTCAAGAAGGTACATTTACATCACTTTAAAAAATTAATTTTGGGATGTGATAGCAGCCAAGATGGCCGAATAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACCCAGAAGACGTGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTAGGTGCATGCACCGTGCGCCAGCCGAAGCAGGGCGAGGCACTGCCTCACTTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAAAAACGGCGCACCACGAGATTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCAGCAGTGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCAGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACCAGCAGACTGCCTCCTCAAGTGGGTTCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACATCTCACACAGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACGGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGACTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACTAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAATTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATGCTTCACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAGACATGGAACGGAACAAACGGTACCAGCTACTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAACGAGCAAAATAACGAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATGTAAATGGACTAAATTCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGAACCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAACGATGGAGGAAGATCTGCAAAGCAAATGGAAAACAAAAAAAGGCAGAGGTTGCAATCCTCATCTCTGATAAAATAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCACTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATACAGCAAGTCCTGAGTGACCTAAAAAGAGACTTAGACTCCCAAACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGTGGACCTAATAGACATCTACACAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTAACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAAAAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGCATTAAGAATCTCACTCAAAGCCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACCGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACAAGAACAAAGACACAACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACTGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGAGCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGATACAACCAAAAAACAGAATTTTAGACCAATAACCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAAACGAA	GATG	20	PASS	ClusterIDs=HG2_Ill_Krunchall_5283:HG4_Ill_GATKHCSBGrefine_2610:HG2_PB_pbsv_3705:HG4_PB_pbsv_3742:HG4_PB_assemblyticsfalcon_17906:HG4_PB_SVrefine2Falcon1Dovetail_2256:HG2_Ill_tnscope_392:HG4_PB_SVrefine2PBcRDovetail_1915:HG3_PB_SVrefine2Falcon1Dovetail_2314:HG2_PB_assemblyticsfalcon_18304:HG2_PB_assemblyticsPBcR_17705:HG2_PB_SVrefine2PBcRplusDovetail_7644:HG2_PB_SVrefine2PB10Xhap12_2720:HG2_PB_SVrefine2Falcon2Bionano_1733:HG2_PB_SVrefine2Falcon1plusDovetail_8241:HG2_Ill_MetaSV_3349:HG4_10X_allpass_671:HG2_10X_allpass_577:HG4_Ill_MetaSV_3500:HG3_PB_assemblyticsfalcon_18199:HG4_Ill_Krunchall_5498;NumClusterSVs=21;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8241:HG2_PB_SVrefine2Falcon2Bionano_1733:HG2_PB_SVrefine2PB10Xhap12_2720:HG2_PB_SVrefine2PBcRplusDovetail_7644:HG2_PB_assemblyticsPBcR_17705:HG2_PB_assemblyticsfalcon_18304:HG3_PB_SVrefine2Falcon1Dovetail_2314:HG4_PB_SVrefine2PBcRDovetail_1915;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0300372;ClusterMaxSizeDiff=0.0300372;ClusterMaxEditDist=0.0300372;PBcalls=13;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=-4218;DistBack=-120;DistForward=-4222;DistMin=-4222;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:145644969-145649190;PctSeqSimilarity=0.9817;PctSizeSimilarity=0.9998;PctRecOverlap=0.9993;SizeDiff=-1;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=99;MatchId=2602.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:31:0|1:33:1:0:22:./.:0:0:0:0:./.:68:6:0/1:289:151:4148:.:.
chr3	145931898	HG2_Ill_manta_1052	ATCTTCCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_502:HG4_PB_assemblyticsfalcon_17909:HG2_PB_assemblyticsfalcon_18307:HG2_PB_assemblyticsPBcR_17708:HG3_PB_assemblyticsfalcon_18203:HG4_Ill_Krunchall_5502:HG3_Ill_Krunchall_5213:HG2_Ill_Krunchall_5287:HG2_PB_HySA_7077:HG4_Ill_MetaSV_3501:HG3_Ill_MetaSV_3526:HG2_Ill_tnscope_393:HG2_Ill_MetaSV_3350:HG4_PB_pbsv_3744:HG4_PB_SVrefine2PBcRDovetail_1917:HG4_PB_SVrefine2Falcon1Dovetail_2257:HG4_PB_HySA_5586:HG4_Ill_scalpel_3582:HG4_Ill_manta_906:HG4_Ill_SVrefine2DISCOVARDovetail_2864:HG4_Ill_GATKHCSBGrefine_2613:HG4_10X_allpass_672:HG3_PB_pbsv_3637:HG3_PB_SVrefine2PBcRDovetail_1729:HG3_PB_SVrefine2Falcon1Dovetail_2316:HG3_Ill_scalpel_3781:HG3_Ill_manta_841:HG3_Ill_SVrefine2DISCOVARDovetail_2852:HG3_Ill_GATKHCSBGrefine_2519:HG3_10X_allpass_719:HG2_PB_pbsv_3707:HG2_PB_SVrefine2PBcRplusDovetail_7645:HG2_PB_SVrefine2PB10Xhap12_2722:HG2_PB_SVrefine2Falcon2Bionano_1735:HG2_PB_SVrefine2Falcon1plusDovetail_8242:HG2_Ill_manta_1052:HG2_Ill_SVrefine2DISCOVARplusDovetail_8900:HG2_Ill_GATKHCSBGrefine_2508:HG2_10X_SVrefine210Xhap12_2764;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2764:HG2_Ill_GATKHCSBGrefine_2508:HG2_Ill_SVrefine2DISCOVARplusDovetail_8900:HG2_Ill_manta_1052:HG2_PB_SVrefine2Falcon1plusDovetail_8242:HG2_PB_SVrefine2Falcon2Bionano_1735:HG2_PB_SVrefine2PB10Xhap12_2722:HG2_PB_SVrefine2PBcRplusDovetail_7645:HG2_PB_pbsv_3707:HG3_10X_allpass_719:HG3_Ill_GATKHCSBGrefine_2519:HG3_Ill_SVrefine2DISCOVARDovetail_2852:HG3_Ill_manta_841:HG3_Ill_scalpel_3781:HG3_PB_SVrefine2Falcon1Dovetail_2316:HG3_PB_SVrefine2PBcRDovetail_1729:HG3_PB_pbsv_3637:HG4_10X_allpass_672:HG4_Ill_GATKHCSBGrefine_2613:HG4_Ill_SVrefine2DISCOVARDovetail_2864:HG4_Ill_manta_906:HG4_Ill_scalpel_3582:HG4_PB_HySA_5586:HG4_PB_SVrefine2Falcon1Dovetail_2257:HG4_PB_SVrefine2PBcRDovetail_1917:HG4_PB_pbsv_3744;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0946166;ClusterMaxSizeDiff=0.0946166;ClusterMaxEditDist=0.0946166;PBcalls=17;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=12;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=22359;DistForward=10397;DistMin=10397;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=3:145931899-145932225;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:1/1:1:32:1:32:./.:0:0:0:0:1/1:0:50:0/1:2:10:.:.:.
chr3	145942608	HG3_Ill_GATKHCSBGrefine_2520	TACAAAGGTTCTCCACGTCCCCATCAGATTAGTTAGATACAGAGTATGGAC	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_5197:HG3_PB_HySA_5779:HG2_PB_HySA_7078:HG3_PB_HySA_5778:HG3_Ill_Krunchall_5214:HG3_Ill_GATKHCSBGrefine_2520:HG3_Ill_250bpfermikitraw_5053:HG3_Ill_150bpfermikitraw_4895:HG2_Ill_GATKHCSBGrefine_2509;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5197:HG3_Ill_Krunchall_5214:HG3_Ill_GATKHCSBGrefine_2520:HG3_Ill_250bpfermikitraw_5053:HG3_Ill_150bpfermikitraw_4895:HG2_Ill_GATKHCSBGrefine_2509;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0384615;PBcalls=3;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=10397;DistForward=57;DistMin=57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=94;REFWIDENED=3:145942609-145942752;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2604.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:18:0|1:25:2:1:13:./.:0:0:0:0:0/1:22:17:./.:.:.:.:.:.
chr3	148197010	HG2_Ill_SVrefine2DISCOVARplusDovetail_8907	GAAGCAAACACAAGCTTCAATAGCTGATTCAATCAAGCAGAAGAAAGGATATCACTGATTAAAGATCAAATTAATTAAATAAAGTGAGAAGACAAGATTAGAGAAAAAAGAGTGAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGATCAAATCTACATTTGAGTGGTGGACCTGAAAGTGATGGGGAGAATGGTACGAAGTTAGAAAACACTCTTCAGGATATTATACAGGAGAACTTCCCCAACCT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8907:HG3_PB_HySA_5793:HG3_Ill_GATKHCSBGrefine_2524:HG3_Ill_250bpfermikitraw_5068:HG3_Ill_150bpfermikitraw_4911:HG3_10X_allpass_722:HG2_Ill_GATKHCSBGrefine_2513:HG2_Ill_MetaSV_3353:HG3_PB_pbsv_3643:HG2_PB_pbsv_3713:HG3_PB_SVrefine2Falcon1Dovetail_2322:HG3_PB_assemblyticsfalcon_18215:HG4_PB_SVrefine2Falcon1Dovetail_2261:HG3_PB_SVrefine2PBcRDovetail_1731:HG3_Ill_SVrefine2DISCOVARDovetail_2863:HG2_PB_SVrefine2PB10Xhap12_2728:HG2_PB_SVrefine2Falcon2Bionano_1740:HG2_PB_SVrefine2Falcon1plusDovetail_8248;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8907:HG4_PB_SVrefine2Falcon1Dovetail_2261:HG3_PB_SVrefine2PBcRDovetail_1731:HG3_Ill_SVrefine2DISCOVARDovetail_2863:HG2_PB_SVrefine2PB10Xhap12_2728:HG2_PB_SVrefine2Falcon2Bionano_1740:HG2_PB_SVrefine2Falcon1plusDovetail_8248;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0267176;ClusterMaxSizeDiff=0.0267176;ClusterMaxEditDist=0.0346154;PBcalls=10;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-262;DistBack=359481;DistForward=-262;DistMin=-262;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=265;REFWIDENED=3:148197011-148197537;PctSeqSimilarity=0.9977;PctSizeSimilarity=1;PctRecOverlap=0.1711;SizeDiff=0;StartDistance=-218;EndDistance=-218;GTMatch=0;TruScore=72;MatchId=2605.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:27:0|1:44:2:1:24:./.:0:0:0:0:0/1:12:3:./.:.:.:.:.:.
chr3	148281434	HG3_PB_SVrefine2Falcon1Dovetail_2323	TGTCCTGTGTAGGGGTGGGTTGCCCCTACATCTGGCGCCCAACGTGGGGCTAAGGGATCTATTCTATTTATTTGCGCTGACTGAATTTTTTCTTCCACTAATTTAATTTCTTTTGTTGCCTCTGGGGTTAACATTCTTTTACTATTTAAGTCTGAGTCTCCTCTTAAGATAGAGAACAAATTTGACATGGCATAAGTAGGAATGCCTAGAGTTGGCCGAATCCAATTAATATCTCCTAGTAATTTTTGAAAATCATTTAGTGTTTTTAATGTGTCTTTTCTTATTTCTATTTTTTGTGGCTTAATTTTTCTATTTTCTATCTGCATCCCTAAATAATGAAAAGGAGTAGAGGTTTGGATCTTATCAGATGCTATTGCCAGTCCAGCATTGGCAACCTCTGCTTGCAGAAATGTATAACAGTCAATTAATTTATCTTTCGTTTCTGCAGCACATAAAATATCATCAATATAATGAATAATATAACAGTCTGAAAACTTTTCTCTAACTGGTTGAAGAGCTCGACCTACAAAAGTCTGACAAATAGTTGGACTATTAAGCATTCCCTGAGGTAACACTTTCCACTGAAACCTGGTGGCTGGTTCTTTATTATTTATGGCTGGTATAGTAAAGGCAAATTTTTCACAATCCTGCTCTGCCAGAGGGATGGTAAAAAAGCAATCCTTTAGATCAATTATAATTAAAGGCCAATCTTTTGGGATCATGGCTGGAGAGGGCAACCCAGGTTGGAGAGGCCCCATGGGTTGAATTACGGCGTTTACAGCCCTTAAGTCAGTTAACATACGCCATTTGCCTGATTTCTTCTGAATTACAAACACAGGAGAATTCCAAGGTGAGAACGAAGGCTCAATATGACCCTTTTCTAACTGTTCATTTGCTAATAAATGTAAAGCCTCCAGTTTTTGTTTTGGTAGCGGCCACTGATTTACCCACACCGGTTTTTCTGTTTTCCAAGTTAATGGTATGGGTTTAGGAGGCTCTACAGTGGCCGCCCCTAAAAAGGATACCCTAATTCCTTCTCTTTCTTGATTTATTTTAGCCTCAACTGGAACTTTAATGCCATCTTCATTTTTCCCTAGTCCCTTTCCTGGTATATATCCCCTCTTGGTCATGATTTTTTGACTCGTGGGGCTATATAATGGAGCGGGCATGGTGATTTCCGCACCCCATTGTTGTAATAAATCTCGACCCCACAGATTAAGAGGAATTGAAGTAATCATTGGCTGAACAGTACTTTCTTGATTATCTGGCCCTAAGCAATGTAAAATCTCCGTACTTTGATACACTTCTGAGGCTGTGCCTATGCCGACAAGTCCTGTAACAGCCTTTTGTTTAGGCCAATTTTTTGGCCACTGATTTAAAGCAATGATAGAGACATCTGCTCCAGTGTCTACCAACCCTTCAAACTGTTTTCCTTGAATAATGGCCTTACACACAGGTCTGTTCTCTGAGACCTGACTTGCCCAATATGCAGCCTTTCCTGTCGGATCAGTGCTTCCAAGCCCTCCTATTCTTTTTATTTCACTATTTTCACCCTTAATATATGGCAGGAGTAATAATTGAGCAATCCTGTCTCCTGGACTGGCACTCCAAGGAATTGAAGAGCTAATAACCAACTGAATTTCGCCTTTATAGTCTGAATCAACCACACTAGTATGAATTTGAACTCCTTTTAGATTTAGACTTGATCTTCCCAAGATTAGTCCTACAGTCCCCTCAGGCAGGGGGCCATATACCCCTGTAGGGATTTTTTGTGGGGGTTCCCCTGGAAGCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCTTGTGGTGAGGGACAATTGTTGTATTGTGGTAACTGGCTTATTCCCTGAAACACTTGGGACAGTGGGGGTTGTTGTCCCTGAAAACCCTGAGGAACAAATGGCTGAATTGGGAATGCCCCAGTTTGTTGTGGGGCCTGAGGCTGGCCCCTTTGCTCGTTTCCCGACAATGGTTGCCCATTTTTATCAAATTTAGAACGACATTGACTAGCCCAATGTTTTCCTTTTTTACATCTTGGACATAAGTCAGGTGGCTCTCTACCTGTTGTAGTTGCTTGAATAGTTATATTCTGTTTATTTAAGACTGGGCAATTCTTTTTTAAGTGACCAATTTGACCACAATTATAACATTTTCCTCCAAATGTTCTAACTTGTCCTCCTAAAACAACTCCTGTTATTGCTTGAGCCATAAGCATAGCTTTATGCATAGCTCCTCCGATTCCATCACAGGCTTTTACATATTCTGAGATTACATCTGATCCTGCAGGAACCTTTCCTTTTAATGGCTTAATGGCTGATTGACACTCAGGATTGGCGTTTTCATATGCCATCAACTCCACTATGACCTTACGGGCTTTTTCATCGGCAATTGACTTTTGAGCAACATCTTGGAGCCTTGCCACAAAATCAGGATAGGGCTCTTTTGAACCTTGTCTTACTGTATTAAATGAGGGGCAGGTACTTCCTGGGTCTTGGATTTTTTCCCAGGCTCTAAGGCAGATAGCTCTAACTTGCTCAATGGCCTCATTTTGCATTAATGCTTGTTGACTAATAGTACTCCAATTTTGACCTATTCCTAATAGTTGATCTGCATCTATGTTAACTGGAGGATTGGCAGCCCTATTTCTTCAGACCTGTTCTTGTACCCCATCAATCCACCAAGTCTTAAATTGTAAAAATTGAGAGGGTGAGAGAGACGATTTTGCCAGAATCTCCCAATCATAAGGAATGAGTCTATGTCCATGAGCAATGGAATCTAATAATGTCCTCATATAAGGGGAGTTGGGTCCATACTGTTTTACTCCCTCTTTCATATCTTTTAGTATTTTTATCGAAAAAGACTTGTATCTGGCCTCAACTGTGGGAGGCTCTCCCTCTTGGGCTCCTTCTCCAGGTGGCATCGGTTCTAACGTTACTGGGAATTGCCATGCCTCAGTATCTCCTTCCTTTCTTGATTTATCAATAATTTCATGTAATTCACTACCCTGTCTACTAGGTGGTGCCGTAGGATTAAGTCTCCTAGTGGGCGGCTGAGGGTATGGCGCCCTGCCCTGTGGTGCTGGGGGCATTCCTGGATATCCATACTGACTTTCTGGGGGTGGCCGATACTGAAGTTCAGCCGGCGGCCAGTATTGATAAGCTACTGGCGGTTGGGTCTTATTTTCTTTAATCTGCTTTTGAGGTTGTAATGTTACGGGCACCTGACCTGCTGGAAGAGGACTTGGCCCTCGTGGTTTAGACTCTGATGGCCCCACTAATTCTGGACCTTTTCCTTCTAATTTTAACGTTTCAGGATATATCACCTCCTGTAATTGATTATAGTCAACATTTTGCGTTGACTGAGCCATTACCGGCTCTGCTACATATTCGCAATGTAAACTTTCCGTTTCTTTCTGGGATTTTTTCCTTGTCTTTTCATTACAATCTATTAAACAGCTTCCAGGGGCATCAGAAACTGAAATGCTATCTTCTTCTGTTTGAAATGGTTCTAAAGCTGCTTTAATAATGGCCCAATCATTCCATACTGTAAGTGGAATGATATTACCCTTCCTACCTGCTTGTTTTAGTTCCTTACCAATTCTTTTCCAATCTTTTAGATCTAAAGTTCCTTGTTCTGGAAACCATGGGCAAAATTGTTCTATTATTTGAAATAGCTTGATTAGATTTTTTGTAGATACTTTAACTCCCCCTCTTTTTAAAAGAATTTTAATAAAGCTGAGATAAGAGGCATATTTACTTTTAATTTTACTTTTAGTTTGCCCCATTATCACCCTAGCTTCTTCCGAGCGCACAAGCTTACCGTAAGGCTGACTGTAGATGTACTCGGGATCTCTCGTCGACTTGTCCTCAATGACCACGCTTGAGCGTACCTTCACCCTAGAGAAAAGCCTCCACGTTGGGCACCAGATGTAGGGGCAACCCACCCCTACA	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3529:HG2_PB_assemblyticsfalcon_18321:HG2_PB_assemblyticsPBcR_17724:HG3_PB_assemblyticsfalcon_18217:HG3_Ill_GATKHCSBGrefine_2525:HG2_PB_pbsv_3714:HG2_Ill_breakscan11_504:HG2_PB_PB10Xdip_20007:HG3_Ill_Krunchall_5237:HG2_Ill_Krunchall_5309:HG2_10X_allpass_580:HG3_Ill_Krunchall_5236:HG2_Ill_Krunchall_5308:HG3_10X_allpass_723:HG2_Ill_tnscope_397:HG3_PB_pbsv_3644:HG3_PB_SVrefine2PBcRDovetail_1732:HG3_PB_SVrefine2Falcon1Dovetail_2323:HG3_Ill_SVrefine2DISCOVARDovetail_2864:HG2_PB_SVrefine2PBcRplusDovetail_7651:HG2_PB_SVrefine2PB10Xhap12_2729:HG2_PB_SVrefine2Falcon2Bionano_1741:HG2_PB_SVrefine2Falcon1plusDovetail_8249:HG2_Ill_MetaSV_3354:HG2_10X_SVrefine210Xhap12_2770;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2770:HG2_Ill_MetaSV_3354:HG2_PB_SVrefine2Falcon1plusDovetail_8249:HG2_PB_SVrefine2Falcon2Bionano_1741:HG2_PB_SVrefine2PB10Xhap12_2729:HG2_PB_SVrefine2PBcRplusDovetail_7651:HG3_Ill_SVrefine2DISCOVARDovetail_2864:HG3_PB_SVrefine2Falcon1Dovetail_2323:HG3_PB_SVrefine2PBcRDovetail_1732:HG3_PB_pbsv_3644;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0319311;ClusterMaxSizeDiff=0.0319311;ClusterMaxEditDist=0.0319311;PBcalls=12;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-3985;DistBack=7724;DistForward=-137;DistMin=-137;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=3:148281435-148285433;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2606.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:78:0|1:31:0:1:42:./.:0:0:0:0:0/1:64:19:0/1:301:159:4080:.:.
chr3	148566792	HG2_Ill_GATKHCSBGrefine_2515	TAGACCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCGCTTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCACCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_3716:HG4_PB_assemblyticsfalcon_17925:HG2_PB_assemblyticsfalcon_18325:HG2_PB_assemblyticsPBcR_17726:HG3_PB_assemblyticsfalcon_18219:HG4_Ill_Krunchall_5524:HG3_Ill_Krunchall_5241:HG3_Ill_Spiral_4106:HG2_Ill_Spiral_260:HG3_PB_HySA_5798:HG2_PB_HySA_7099:HG4_Ill_MetaSV_3504:HG3_Ill_MetaSV_3530:HG2_Ill_tnscope_398:HG2_Ill_MetaSV_3355:HG4_PB_pbsv_3751:HG4_PB_SVrefine2Falcon1Dovetail_2262:HG4_Ill_scalpel_3592:HG4_Ill_manta_909:HG4_Ill_SVrefine2DISCOVARDovetail_2873:HG4_Ill_GATKHCSBGrefine_2619:HG4_10X_allpass_675:HG3_PB_pbsv_3645:HG3_PB_SVrefine2PBcRDovetail_1733:HG3_PB_SVrefine2Falcon1Dovetail_2324:HG3_Ill_scalpel_3794:HG3_Ill_manta_844:HG3_Ill_SVrefine2DISCOVARDovetail_2865:HG3_Ill_GATKHCSBGrefine_2527:HG3_10X_allpass_724:HG2_PB_SVrefine2PBcRplusDovetail_7652:HG2_PB_SVrefine2PB10Xhap12_2731:HG2_PB_SVrefine2Falcon2Bionano_1742:HG2_PB_SVrefine2Falcon1plusDovetail_8250:HG2_Ill_scalpel_3677:HG2_Ill_manta_1054:HG2_Ill_SVrefine2DISCOVARplusDovetail_8908:HG2_Ill_GATKHCSBGrefine_2515:HG2_10X_allpass_581:HG2_10X_SVrefine210Xhap12_2771:HG2_Ill_breakscan11_505;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2771:HG2_10X_allpass_581:HG2_Ill_GATKHCSBGrefine_2515:HG2_Ill_SVrefine2DISCOVARplusDovetail_8908:HG2_Ill_manta_1054:HG2_Ill_scalpel_3677:HG2_PB_SVrefine2Falcon1plusDovetail_8250:HG2_PB_SVrefine2Falcon2Bionano_1742:HG2_PB_SVrefine2PB10Xhap12_2731:HG2_PB_SVrefine2PBcRplusDovetail_7652:HG3_10X_allpass_724:HG3_Ill_GATKHCSBGrefine_2527:HG3_Ill_SVrefine2DISCOVARDovetail_2865:HG3_Ill_manta_844:HG3_Ill_scalpel_3794:HG3_PB_SVrefine2Falcon1Dovetail_2324:HG3_PB_SVrefine2PBcRDovetail_1733:HG3_PB_pbsv_3645:HG4_10X_allpass_675:HG4_Ill_GATKHCSBGrefine_2619:HG4_Ill_SVrefine2DISCOVARDovetail_2873:HG4_Ill_manta_909:HG4_Ill_scalpel_3592:HG4_PB_SVrefine2Falcon1Dovetail_2262:HG4_PB_pbsv_3751;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0605096;ClusterMaxSizeDiff=0.0605096;ClusterMaxEditDist=0.0605096;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=72324;DistForward=43532;DistMin=43532;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=3:148566793-148567120;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:65:1/1:1:20:1:20:./.:0:0:0:0:1/1:0:35:0/1:3:12:.:.:.
chr3	148844372	HG3_PB_SVrefine2Falcon1Dovetail_2325	TAAGATGCAAAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_261:HG2_PB_SVrefine2PB10Xhap12_2733:HG4_PB_assemblyticsfalcon_17928:HG2_PB_assemblyticsfalcon_18329:HG3_Ill_Krunchall_5250:HG2_PB_pbsv_3717:HG3_PB_assemblyticsfalcon_18222:HG2_PB_HySA_7105:HG2_PB_PB10Xdip_20009:HG4_Ill_Krunchall_5528:HG2_Ill_Krunchall_5315:HG2_PB_assemblyticsPBcR_17731:HG2_PB_SVrefine2PBcRplusDovetail_7653:HG4_PB_pbsv_3752:HG3_PB_pbsv_3647:HG4_Ill_MetaSV_3505:HG3_Ill_MetaSV_3531:HG2_Ill_tnscope_399:HG2_Ill_MetaSV_3356:HG4_PB_SVrefine2PBcRDovetail_1921:HG4_PB_SVrefine2Falcon1Dovetail_2263:HG4_Ill_manta_910:HG4_Ill_SVrefine2DISCOVARDovetail_2878:HG4_Ill_GATKHCSBGrefine_2620:HG4_10X_allpass_676:HG3_PB_SVrefine2PBcRDovetail_1734:HG3_PB_SVrefine2Falcon1Dovetail_2325:HG3_PB_HySA_5805:HG3_Ill_scalpel_3802:HG3_Ill_manta_845:HG3_Ill_SVrefine2DISCOVARDovetail_2867:HG3_Ill_GATKHCSBGrefine_2529:HG3_10X_allpass_726:HG2_PB_SVrefine2PB10Xhap12_2732:HG2_PB_SVrefine2Falcon1plusDovetail_8251:HG2_Ill_manta_1055:HG2_Ill_breakscan11_506:HG2_Ill_GATKHCSBGrefine_2516:HG2_10X_allpass_582:HG2_10X_SVrefine210Xhap12_2773:HG4_Ill_Spiral_309;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2773:HG2_10X_allpass_582:HG2_Ill_GATKHCSBGrefine_2516:HG2_Ill_breakscan11_506:HG2_Ill_manta_1055:HG2_PB_SVrefine2Falcon1plusDovetail_8251:HG2_PB_SVrefine2PB10Xhap12_2732:HG3_10X_allpass_726:HG3_Ill_GATKHCSBGrefine_2529:HG3_Ill_SVrefine2DISCOVARDovetail_2867:HG3_Ill_manta_845:HG3_Ill_scalpel_3802:HG3_PB_HySA_5805:HG3_PB_SVrefine2Falcon1Dovetail_2325:HG3_PB_SVrefine2PBcRDovetail_1734:HG4_10X_allpass_676:HG4_Ill_GATKHCSBGrefine_2620:HG4_Ill_SVrefine2DISCOVARDovetail_2878:HG4_Ill_manta_910:HG4_PB_SVrefine2Falcon1Dovetail_2263:HG4_PB_SVrefine2PBcRDovetail_1921;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0838509;ClusterMaxSizeDiff=0.0838509;ClusterMaxEditDist=0.0838509;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=4498;DistForward=9301;DistMin=4498;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=3:148844373-148844714;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2608.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:42:./.:17:8:6:22:./.:0:0:0:0:0/1:19:25:0/1:32:11:.:.:.
chr3	149878065	HG2_Ill_MetaSV_3360	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_3761:HG2_PB_assemblyticsPBcR_17736:HG4_PB_assemblyticsfalcon_17943:HG3_PB_assemblyticsfalcon_18232:HG2_PB_assemblyticsfalcon_18338:HG2_PB_PB10Xdip_20017:HG4_PB_SVrefine2PBcRDovetail_1923:HG2_PB_SVrefine2PBcRplusDovetail_7656:HG2_PB_SVrefine2PB10Xhap12_2738:HG2_PB_HySA_7110:HG2_Ill_Krunchall_5325:HG4_PB_SVrefine2Falcon1Dovetail_2268:HG4_Ill_scalpel_3602:HG4_Ill_SVrefine2DISCOVARDovetail_2882:HG4_Ill_GATKHCSBGrefine_2625:HG4_10X_allpass_677:HG3_Ill_scalpel_3805:HG3_Ill_SVrefine2DISCOVARDovetail_2873:HG3_Ill_GATKHCSBGrefine_2534:HG2_PB_SVrefine2Falcon2Bionano_1745:HG2_Ill_scalpel_3686:HG2_Ill_breakscan11_507:HG2_Ill_SVrefine2DISCOVARplusDovetail_8911:HG2_Ill_MetaSV_3360:HG2_Ill_GATKHCSBGrefine_2521:HG2_10X_SVrefine210Xhap12_2775:HG4_Ill_Spiral_310:HG4_Ill_MetaSV_3507:HG3_Ill_Spiral_4117:HG3_Ill_MetaSV_3535:HG2_Ill_tnscope_400:HG2_Ill_Spiral_262:HG3_PB_SVrefine2Falcon1Dovetail_2329:HG2_PB_SVrefine2Falcon1plusDovetail_8255:HG2_PB_pbsv_3725:HG3_PB_pbsv_3656:HG2_PB_SVrefine2PB10Xhap12_2737;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2775:HG2_Ill_GATKHCSBGrefine_2521:HG2_Ill_MetaSV_3360:HG2_Ill_SVrefine2DISCOVARplusDovetail_8911:HG2_Ill_breakscan11_507:HG2_Ill_scalpel_3686:HG2_PB_SVrefine2Falcon2Bionano_1745:HG3_Ill_GATKHCSBGrefine_2534:HG3_Ill_SVrefine2DISCOVARDovetail_2873:HG3_Ill_scalpel_3805:HG4_10X_allpass_677:HG4_Ill_GATKHCSBGrefine_2625:HG4_Ill_SVrefine2DISCOVARDovetail_2882:HG4_Ill_scalpel_3602:HG4_PB_SVrefine2Falcon1Dovetail_2268;NumExactMatchSVs=15;ClusterMaxShiftDist=0.164502;ClusterMaxSizeDiff=0.164502;ClusterMaxEditDist=0.171014;PBcalls=17;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-43;DistForward=-246;DistMin=-246;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=3:149878066-149878392;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2609.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:36:0|1:28:3:1:32:./.:0:0:0:0:0/1:31:16:0/1:27:13:.:.:.
chr3	151086417	HG2_Ill_manta_1058	TATTTCATTTCATTTCATTTCATTTCATTTCATTTCATTTCATTTCATGTCATTTC	T	20	PASS	ClusterIDs=HG4_Ill_150bpfermikitraw_5040:HG2_PB_HySA_7120:HG4_PB_HySA_5621:HG4_Ill_GATKHC_6324:HG4_Ill_GATKHCSBGrefine_2629:HG3_Ill_GATKHC_6285:HG3_Ill_GATKHCSBGrefine_2536:HG2_Ill_GATKHC_6218:HG2_Ill_GATKHCSBGrefine_2525:HG3_Ill_GATKHC_6284:HG3_Ill_manta_848:HG3_Ill_GATKHCSBGrefine_2535:HG4_PB_assemblyticsfalcon_17954:HG3_PB_assemblyticsfalcon_18245:HG2_PB_assemblyticsfalcon_18350:HG3_Ill_150bpfermikitraw_4935:HG2_Ill_250bpfermikitraw_5234:HG4_Ill_GATKHC_6323:HG4_Ill_GATKHCSBGrefine_2628:HG4_Ill_150bpfermikitraw_5041:HG3_PB_pbsv_3662:HG2_PB_pbsv_3731:HG2_PB_assemblyticsPBcR_17745:HG2_Ill_manta_1058:HG2_Ill_GATKHC_6217:HG2_Ill_GATKHCSBGrefine_2524:HG2_Ill_150bpfermikitraw_4849:HG3_PB_HySA_5819:HG3_Ill_150bpfermikitraw_4934;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_4849:HG2_Ill_GATKHCSBGrefine_2524:HG2_Ill_GATKHC_6217:HG2_Ill_manta_1058:HG2_PB_assemblyticsPBcR_17745:HG2_PB_pbsv_3731:HG3_PB_pbsv_3662:HG4_Ill_150bpfermikitraw_5041:HG4_Ill_GATKHCSBGrefine_2628:HG4_Ill_GATKHC_6323;NumExactMatchSVs=10;ClusterMaxShiftDist=0.315789;ClusterMaxSizeDiff=0.315789;ClusterMaxEditDist=0.315789;PBcalls=9;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=51192;DistForward=23310;DistMin=23310;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=123;REFWIDENED=3:151086374-151086551;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2610.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:75:1/1:1:28:3:43:./.:0:0:0:0:1/1:1:17:./.:.:.:.:.:.
chr3	152311723	HG2_PB_SVrefine2Falcon1plusDovetail_8262	AAAGAGGTCACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCAATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTCATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCCCAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAG	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_401:HG2_PB_HySA_7126:HG4_PB_assemblyticsfalcon_17961:HG2_PB_assemblyticsfalcon_18356:HG2_Ill_Krunchall_5337:HG3_PB_pbsv_3667:HG4_PB_SVrefine2PBcRDovetail_1929:HG4_PB_SVrefine2Falcon1Dovetail_2277:HG4_Ill_SVrefine2DISCOVARDovetail_2894:HG4_Ill_MetaSV_3511:HG4_Ill_GATKHCSBGrefine_2633:HG4_10X_allpass_678:HG3_PB_SVrefine2PBcRDovetail_1743:HG3_PB_SVrefine2Falcon1Dovetail_2339:HG3_Ill_SVrefine2DISCOVARDovetail_2885:HG3_Ill_MetaSV_3538:HG3_Ill_GATKHCSBGrefine_2540:HG3_10X_allpass_728:HG2_PB_pbsv_3737:HG2_PB_SVrefine2PBcRplusDovetail_7662:HG2_PB_SVrefine2PB10Xhap12_2746:HG2_PB_SVrefine2Falcon2Bionano_1754:HG2_PB_SVrefine2Falcon1plusDovetail_8262:HG2_Ill_breakscan11_508:HG2_Ill_SVrefine2DISCOVARplusDovetail_8922:HG2_Ill_MetaSV_3363:HG2_Ill_GATKHCSBGrefine_2527:HG2_10X_allpass_583:HG2_10X_SVrefine210Xhap12_2783:HG4_PB_pbsv_3773;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2783:HG2_10X_allpass_583:HG2_Ill_GATKHCSBGrefine_2527:HG2_Ill_MetaSV_3363:HG2_Ill_SVrefine2DISCOVARplusDovetail_8922:HG2_Ill_breakscan11_508:HG2_PB_SVrefine2Falcon1plusDovetail_8262:HG2_PB_SVrefine2Falcon2Bionano_1754:HG2_PB_SVrefine2PB10Xhap12_2746:HG2_PB_SVrefine2PBcRplusDovetail_7662:HG2_PB_pbsv_3737:HG3_10X_allpass_728:HG3_Ill_GATKHCSBGrefine_2540:HG3_Ill_MetaSV_3538:HG3_Ill_SVrefine2DISCOVARDovetail_2885:HG3_PB_SVrefine2Falcon1Dovetail_2339:HG3_PB_SVrefine2PBcRDovetail_1743:HG4_10X_allpass_678:HG4_Ill_GATKHCSBGrefine_2633:HG4_Ill_MetaSV_3511:HG4_Ill_SVrefine2DISCOVARDovetail_2894:HG4_PB_SVrefine2Falcon1Dovetail_2277:HG4_PB_SVrefine2PBcRDovetail_1929;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0258651;ClusterMaxSizeDiff=0.0258651;ClusterMaxEditDist=0.0258651;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1432;DistBack=47570;DistForward=-1418;DistMin=-1418;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=3:152311724-152313170;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2611.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:1/1:0:22:0:20:./.:0:0:0:0:1/1:0:39:1/1:3:113:1445:.:.
chr3	153386325	HG2_Ill_GATKHC_6241	ATCTCAAAAAAAAAAAAAAAAAAAAAAATTAGTTTCCTAGTACATAGTAACCCATTTCTC	A	20	PASS	ClusterIDs=HG2_10X_allpass_586:HG2_PB_pbsv_3746:HG2_PB_assemblyticsPBcR_17772:HG4_PB_assemblyticsfalcon_17980:HG4_PB_pbsv_3783:HG4_Ill_svaba_4873:HG4_Ill_scalpel_3624:HG4_Ill_manta_915:HG4_Ill_Krunchall_5572:HG4_Ill_GATKHC_6346:HG4_Ill_GATKHCSBGrefine_2644:HG4_Ill_250bpfermikitraw_5325:HG4_Ill_150bpfermikitraw_5068:HG4_CG_vcfBeta_2552:HG4_10X_allpass_683:HG3_PB_pbsv_3677:HG3_PB_assemblyticsfalcon_18269:HG3_Ill_svaba_4847:HG3_Ill_scalpel_3821:HG3_Ill_Krunchall_5279:HG3_Ill_GATKHC_6306:HG3_Ill_GATKHCSBGrefine_2547:HG3_Ill_250bpfermikitraw_5106:HG3_Ill_150bpfermikitraw_4955:HG3_CG_vcfBeta_2203:HG3_10X_allpass_731:HG2_Ill_svaba_4765:HG2_Ill_scalpel_3705:HG2_Ill_manta_1062:HG2_Ill_Krunchall_5357:HG2_Ill_GATKHC_6241:HG2_Ill_GATKHCSBGrefine_2539:HG2_Ill_250bpfermikitraw_5258:HG2_Ill_150bpfermikitraw_4874:HG2_CG_vcfBeta_2281;NumClusterSVs=35;ExactMatchIDs=HG2_10X_allpass_586:HG2_PB_assemblyticsPBcR_17772:HG4_PB_pbsv_3783:HG4_Ill_svaba_4873:HG4_Ill_scalpel_3624:HG4_Ill_manta_915:HG4_Ill_Krunchall_5572:HG4_Ill_GATKHC_6346:HG4_Ill_GATKHCSBGrefine_2644:HG4_Ill_250bpfermikitraw_5325:HG4_Ill_150bpfermikitraw_5068:HG4_CG_vcfBeta_2552:HG4_10X_allpass_683:HG3_PB_pbsv_3677:HG3_PB_assemblyticsfalcon_18269:HG3_Ill_svaba_4847:HG3_Ill_scalpel_3821:HG3_Ill_Krunchall_5279:HG3_Ill_GATKHC_6306:HG3_Ill_GATKHCSBGrefine_2547:HG3_Ill_250bpfermikitraw_5106:HG3_Ill_150bpfermikitraw_4955:HG3_CG_vcfBeta_2203:HG3_10X_allpass_731:HG2_Ill_svaba_4765:HG2_Ill_scalpel_3705:HG2_Ill_manta_1062:HG2_Ill_Krunchall_5357:HG2_Ill_GATKHC_6241:HG2_Ill_GATKHCSBGrefine_2539:HG2_Ill_250bpfermikitraw_5258:HG2_Ill_150bpfermikitraw_4874:HG2_CG_vcfBeta_2281;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0168067;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.0168067;PBcalls=6;Illcalls=23;TenXcalls=3;CGcalls=3;PBexactcalls=4;Illexactcalls=23;TenXexactcalls=3;CGexactcalls=3;HG2count=12;HG3count=11;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-59;DistBack=21785;DistForward=14749;DistMin=14749;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:153386326-153386387;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2612.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:33:0|1:22:3:4:29:./.:0:0:0:0:0/1:16:25:./.:.:.:.:.:.
chr3	154096733	HG2_PB_SVrefine2Falcon2Bionano_1763	TAAAAGTCCTTTATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCAAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2793:HG2_PB_HySA_7147:HG2_10X_allpass_587:HG3_Ill_MetaSV_3541:HG2_Ill_MetaSV_3368:HG4_PB_assemblyticsfalcon_17984:HG3_PB_assemblyticsfalcon_18274:HG2_PB_assemblyticsfalcon_18372:HG2_PB_assemblyticsPBcR_17776:HG3_PB_HySA_5842:HG3_Ill_Krunchall_5284:HG4_Ill_Krunchall_5577:HG4_PB_pbsv_3786:HG3_PB_pbsv_3680:HG4_PB_HySA_5642:HG4_Ill_MetaSV_3513:HG3_Ill_MetaSV_3540:HG2_Ill_tnscope_402:HG2_Ill_MetaSV_3367:HG4_PB_SVrefine2PBcRDovetail_1938:HG4_PB_SVrefine2Falcon1Dovetail_2286:HG4_Ill_scalpel_3628:HG4_Ill_manta_916:HG4_Ill_SVrefine2DISCOVARDovetail_2903:HG4_Ill_GATKHCSBGrefine_2645:HG4_10X_allpass_684:HG3_PB_SVrefine2PBcRDovetail_1751:HG3_PB_SVrefine2Falcon1Dovetail_2350:HG3_Ill_scalpel_3823:HG3_Ill_manta_853:HG3_Ill_SVrefine2DISCOVARDovetail_2895:HG3_Ill_GATKHCSBGrefine_2548:HG3_10X_allpass_732:HG2_PB_pbsv_3749:HG2_PB_SVrefine2PBcRplusDovetail_7671:HG2_PB_SVrefine2PB10Xhap12_2756:HG2_PB_SVrefine2Falcon2Bionano_1763:HG2_PB_SVrefine2Falcon1plusDovetail_8272:HG2_Ill_scalpel_3707:HG2_Ill_manta_1063:HG2_Ill_breakscan11_510:HG2_Ill_SVrefine2DISCOVARplusDovetail_8932:HG2_Ill_GATKHCSBGrefine_2540;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2793:HG4_PB_SVrefine2PBcRDovetail_1938:HG4_PB_SVrefine2Falcon1Dovetail_2286:HG4_Ill_scalpel_3628:HG4_Ill_manta_916:HG4_Ill_SVrefine2DISCOVARDovetail_2903:HG4_Ill_GATKHCSBGrefine_2645:HG4_10X_allpass_684:HG3_PB_SVrefine2PBcRDovetail_1751:HG3_PB_SVrefine2Falcon1Dovetail_2350:HG3_Ill_scalpel_3823:HG3_Ill_manta_853:HG3_Ill_SVrefine2DISCOVARDovetail_2895:HG3_Ill_GATKHCSBGrefine_2548:HG3_10X_allpass_732:HG2_PB_pbsv_3749:HG2_PB_SVrefine2PBcRplusDovetail_7671:HG2_PB_SVrefine2PB10Xhap12_2756:HG2_PB_SVrefine2Falcon2Bionano_1763:HG2_PB_SVrefine2Falcon1plusDovetail_8272:HG2_Ill_scalpel_3707:HG2_Ill_manta_1063:HG2_Ill_breakscan11_510:HG2_Ill_SVrefine2DISCOVARplusDovetail_8932:HG2_Ill_GATKHCSBGrefine_2540;NumExactMatchSVs=25;ClusterMaxShiftDist=0.147692;ClusterMaxSizeDiff=0.147692;ClusterMaxEditDist=0.147692;PBcalls=18;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=37625;DistForward=23241;DistMin=23241;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=3:154096734-154097067;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2613.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:20:0:31:./.:0:0:0:0:1/1:0:51:1/1:1:12:.:.:.
chr3	156092171	HG2_Ill_SpiralSDKrefine_11554	CATGAATTCCTGAGCTATTTCAGTGTTGAGCCATACCCTAGAGCACTTTATTTGCTTGGGAAGCTTGATTTGTTCATGGGAGTTTGCACATACAAAGTGTTTATTTGTCAAACATTATTTTTTAGAAGGTACACCAATATTGAGGCTTAATTCCTAGCAATAGGTAGTTCCAGTCCAAAGCCTTATAGAAATTGGCTTATGGAAATTGCAGCGGAAATAGCAGCCTTGGTGGTTGCATGGGTAGAAGCTTCACCTTTGCCCTTCCCACTAGCGAGAGGTGGTAGAATGCAGAGGTGAATGGCACAAACTTCAGTTTCATTGAGGCAGATGTGGTCCCATGCCCAGCTCTGCCACTTATGGCTGTTCGGCCTTAGTTAAACCTCGCTTTCCTTATGTATGAAGTGGGGCTTAGGAAAGTAGGTATTAACAATACCTACTGTAATAAGTTGTTGTAAAGGTTAGATTTTAAAAAAATACAGATTAAGTGCCTAGCACGATGTTCTGAATATAAATGATTAATAGACGTGAGTTCTCATTATAGAAAACACAAAGAAATTTAAAATGTTAAGCCAACATCATTCTTTGATATAAATATACAAGGACTATATTCACTATGTAAGTCTCCCTCACTTCTTCCTTTATTGACCACTGCACTGACATTGTTTGGTTTGGTTTTATGTTCAGAGTAGGTCAGTTAAGGTAAACGATGATAAAATAACAATGCCTTGCATTAGACTGTCGTGATTTATAAAACAATTTCACATGCATTATCTCCTATATTCATAGTCCAACTTTCTTCAAACAAGAAAATTGACCCTAGTTAATAGAGCTGGTGAGTGACAGAGCAGAACGTAGAATGCAGTTTTCTTCATCCTCTCTTCCTTGCAAAAGGCCACAGTCCTTCTTTGTAGAGTTTATGAAGCTCATCCCTATGCAGCCCCTCACTCCCAGCCACTTTTGTGGTGGAAGCTGGGCTGGTGTTATTATCTCCATTTGTTAGGTAAGGAAATTGATGCTCCGAGAAGTTTAACGACATTCCTGATGTTGCAAAGCTGGGAAGGGGCAGAGAATAGACCAGAACCTGCTCATTTTCTAGTGACACAGACAGAAACATAGGTAAGCAAATCAAAACAACGTTAATACATGTTATAATTCTTTAAAAATGAATTATAAAATGGTGTTTGGTCTCAGAGGCAAAAGAAAATAATTGTGTCTGTGTGGAGGCACATGTGCATGTGTGTGTTGTCCAGGGAAAGTCTCTCAAAGGAAGGAATACTTGAATTGATATTAGGAAGAAAAGTAGGCAGCAAAGTGGCACCTAAAGAAAATTAGGCAGTGGAAAAACCATATGCAAAAGAACAGAGGCACAACATAACTTTGCCAGTATGGGAGGAAAGTCTGTATGCCTGGAGTTAAGTGTCCTACATATTGAAGATTTCTTCTTTTTTTTGTGTGTGTGTTGGAGTGCCACTCTGTCACCCAGGCTGGAGTGCAATGGCACAATCTCGGCTCATTGCAACC	TTAA	20	PASS	ClusterIDs=HG4_PB_pbsv_3794:HG2_Ill_GATKHCSBGrefine_2546:HG4_PB_SVrefine2Falcon1Dovetail_2292:HG3_PB_SVrefine2Falcon1Dovetail_2355:HG2_PB_SVrefine2PB10Xhap12_2761:HG2_PB_SVrefine2Falcon2Bionano_1767:HG2_Ill_SpiralSDKrefine_11554:HG2_10X_SVrefine210Xhap12_2799:HG2_Ill_tnscope_403:HG4_Ill_MetaSV_3517:HG2_PB_HySA_7158:HG2_10X_allpass_588:HG4_Ill_Krunchall_5591:HG2_Ill_Krunchall_5370:HG4_PB_assemblyticsfalcon_17997:HG3_PB_assemblyticsfalcon_18286:HG2_Ill_MetaSV_3371:HG4_10X_allpass_686:HG2_PB_assemblyticsfalcon_18381:HG2_PB_SVrefine2Falcon1plusDovetail_8275:HG2_PB_PB10Xdip_20047:HG2_PB_pbsv_3754;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2799:HG2_Ill_SpiralSDKrefine_11554:HG2_PB_SVrefine2Falcon2Bionano_1767:HG2_PB_SVrefine2PB10Xhap12_2761:HG3_PB_SVrefine2Falcon1Dovetail_2355:HG4_PB_SVrefine2Falcon1Dovetail_2292;NumExactMatchSVs=6;ClusterMaxShiftDist=0.105627;ClusterMaxSizeDiff=0.105627;ClusterMaxEditDist=0.105627;PBcalls=12;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1517;DistBack=-16;DistForward=-1502;DistMin=-1502;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:156092171-156093691;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9987;PctRecOverlap=0.9967;SizeDiff=2;StartDistance=-5;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2614.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:35:0|1:40:0:0:31:./.:0:0:0:0:0/1:44:13:0/1:116:47:.:.:.
chr3	158116901	HG3_Ill_SVrefine2DISCOVARDovetail_2919	ACTATTATTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2805:HG2_10X_allpass_589:HG2_PB_SVrefine2PB10Xhap12_2769:HG2_PB_PB10Xdip_20051:HG4_PB_assemblyticsfalcon_18011:HG3_PB_assemblyticsfalcon_18300:HG2_PB_assemblyticsfalcon_18395:HG2_PB_assemblyticsPBcR_17797:HG3_PB_HySA_5865:HG3_Ill_Krunchall_5302:HG2_Ill_Krunchall_5386:HG4_Ill_Spiral_316:HG3_Ill_Spiral_4152:HG2_Ill_breakscan11_512:HG4_Ill_MetaSV_3519:HG3_Ill_MetaSV_3544:HG2_Ill_tnscope_404:HG2_Ill_MetaSV_3373:HG4_PB_pbsv_3804:HG4_PB_SVrefine2PBcRDovetail_1950:HG4_PB_SVrefine2Falcon1Dovetail_2298:HG4_Ill_GATKHCSBGrefine_2658:HG4_10X_allpass_687:HG3_PB_pbsv_3691:HG3_PB_SVrefine2PBcRDovetail_1759:HG3_PB_SVrefine2Falcon1Dovetail_2358:HG3_Ill_scalpel_3832:HG3_Ill_SVrefine2DISCOVARDovetail_2919:HG3_Ill_GATKHCSBGrefine_2560:HG3_10X_allpass_733:HG2_PB_pbsv_3761:HG2_PB_SVrefine2PBcRplusDovetail_7678:HG2_PB_SVrefine2PB10Xhap12_2768:HG2_PB_SVrefine2Falcon1plusDovetail_8280:HG2_PB_HySA_7168:HG2_Ill_scalpel_3722:HG2_Ill_manta_1067:HG2_Ill_GATKHCSBGrefine_2555;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2805:HG4_PB_pbsv_3804:HG4_PB_SVrefine2PBcRDovetail_1950:HG4_PB_SVrefine2Falcon1Dovetail_2298:HG4_Ill_GATKHCSBGrefine_2658:HG4_10X_allpass_687:HG3_PB_pbsv_3691:HG3_PB_SVrefine2PBcRDovetail_1759:HG3_PB_SVrefine2Falcon1Dovetail_2358:HG3_Ill_scalpel_3832:HG3_Ill_SVrefine2DISCOVARDovetail_2919:HG3_Ill_GATKHCSBGrefine_2560:HG3_10X_allpass_733:HG2_PB_pbsv_3761:HG2_PB_SVrefine2PBcRplusDovetail_7678:HG2_PB_SVrefine2PB10Xhap12_2768:HG2_PB_SVrefine2Falcon1plusDovetail_8280:HG2_PB_HySA_7168:HG2_Ill_scalpel_3722:HG2_Ill_manta_1067:HG2_Ill_GATKHCSBGrefine_2555;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0921248;ClusterMaxSizeDiff=0.0921248;ClusterMaxEditDist=0.0921248;PBcalls=18;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-343;DistBack=49420;DistForward=52373;DistMin=49420;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:158116902-158117260;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:44:0|1:21:0:1:38:./.:0:0:0:0:0/1:20:15:0/1:21:11:.:.:.
chr3	159257022	HG3_PB_assemblyticsfalcon_18309	GGATCAATTTTCAAAGAACTTAGGGTTATAATTTTTTATTTATAACAATCTTTGATTCAAATGGGATTTAGATTCACACAAAGATGCATGCAAGAGAGCATAAATATTGGAACAAAAGTAAATCTGAAAAACAAGGAAAAAAGAAGAGAAAACAATATGTATGTCATAATTAATTTAGTATATCAAAGTTTAATAACCTCGAATGGACTTGAGATGGAGTTAAGGAATAGGTGGGGAGTGAGGCAAGGGATGAGCAAGGAACCGCTGGATGTTAGTGCAAAATGCTGTGGGTATGCTTGACCCACATATTTCTGTCCCTTCCCCCTTCATGAATCTTCACCACAATGGCAGATCCTTGAGGCTAGATATACAGTCCTCGTGTATCTGTGGAATATCTATACTATGTCCTGGACCACGTGAGCATGACTCAGTAATGATCTCACAATAGGACGTCACTCTCCATTTTGACGGTATCTACTGTATCTACCTCCTTTGTACATTATTTTCTCCTCTGAGTGCTTTCCCCCCATTTTAAGCTAATAAAACAAACATGCACACTATTACAGCACTTATACTGCACCAGATAGGAAAACAAATATGTATCTATTTTGGCTAAAAATCTTACATTGAGAACTATGGACACTAAAGAAATAAAGAGATGATTCCTCT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_3765:HG4_Ill_GATKHCSBGrefine_2660:HG3_Ill_GATKHCSBGrefine_2562:HG2_Ill_GATKHCSBGrefine_2557:HG2_Ill_tnscope_405:HG4_PB_SVrefine2PBcRDovetail_1953:HG4_PB_SVrefine2Falcon1Dovetail_2301:HG4_Ill_manta_922:HG4_Ill_SVrefine2DISCOVARDovetail_2925:HG4_Ill_Cortex_2502:HG3_PB_assemblyticsfalcon_18309:HG3_PB_SVrefine2Falcon1Dovetail_2361:HG3_Ill_manta_858:HG3_Ill_SVrefine2DISCOVARDovetail_2924:HG3_Ill_Cortex_2513:HG2_PB_assemblyticsfalcon_18402:HG2_PB_SVrefine2PBcRplusDovetail_7682:HG2_PB_SVrefine2PB10Xhap12_2773:HG2_PB_SVrefine2Falcon2Bionano_1776:HG2_PB_SVrefine2Falcon1plusDovetail_8284:HG2_PB_PB10Xdip_20056:HG2_Ill_manta_1068:HG2_Ill_SVrefine2DISCOVARplusDovetail_8956:HG2_Ill_Cortex_5877:HG2_10X_SVrefine210Xhap12_2808:HG4_10X_allpass_688:HG4_Ill_Spiral_317:HG3_Ill_Spiral_4158:HG2_Ill_Spiral_266:HG4_Ill_svaba_4914:HG3_PB_pbsv_3695:HG3_Ill_svaba_4881:HG3_10X_allpass_734:HG2_Ill_svaba_4796:HG2_Ill_SpiralSDKrefine_11573:HG2_10X_allpass_590:HG4_PB_assemblyticsfalcon_18019:HG2_PB_assemblyticsPBcR_17804:HG3_Ill_MetaSV_3545:HG2_Ill_MetaSV_3375:HG3_Ill_Krunchall_5310:HG2_Ill_Krunchall_5394:HG4_PB_pbsv_3808:HG4_Ill_MetaSV_3520;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2808:HG2_Ill_Cortex_5877:HG2_Ill_SVrefine2DISCOVARplusDovetail_8956:HG2_Ill_manta_1068:HG2_PB_PB10Xdip_20056:HG2_PB_SVrefine2Falcon1plusDovetail_8284:HG2_PB_SVrefine2Falcon2Bionano_1776:HG2_PB_SVrefine2PB10Xhap12_2773:HG2_PB_SVrefine2PBcRplusDovetail_7682:HG2_PB_assemblyticsfalcon_18402:HG3_Ill_Cortex_2513:HG3_Ill_SVrefine2DISCOVARDovetail_2924:HG3_Ill_manta_858:HG3_PB_SVrefine2Falcon1Dovetail_2361:HG3_PB_assemblyticsfalcon_18309:HG4_Ill_Cortex_2502:HG4_Ill_SVrefine2DISCOVARDovetail_2925:HG4_Ill_manta_922:HG4_PB_SVrefine2Falcon1Dovetail_2301:HG4_PB_SVrefine2PBcRDovetail_1953;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0104712;ClusterMaxSizeDiff=0.0104712;ClusterMaxEditDist=0.010479;PBcalls=15;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-668;DistBack=92851;DistForward=10156;DistMin=10156;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:159257022-159257690;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9985;PctRecOverlap=0.997;SizeDiff=-1;StartDistance=2;EndDistance=1;GTMatch=0;TruScore=99;MatchId=2616.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:14:86:1/1:6:27:2:23:./.:0:0:0:0:1/1:0:40:./.:2:21:.:.:.
chr3	159428985	HG2_Ill_scalpel_3729	TAAGAAATTTAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2810:HG4_PB_SVrefine2PBcRDovetail_1955:HG4_PB_pbsv_3810:HG4_Ill_Krunchall_5620:HG2_Ill_Krunchall_5397:HG4_Ill_Spiral_318:HG2_Ill_Spiral_267:HG2_PB_pbsv_3767:HG4_Ill_MetaSV_3522:HG2_Ill_MetaSV_3377:HG4_Ill_scalpel_3658:HG4_Ill_manta_923:HG4_Ill_SVrefine2DISCOVARDovetail_2927:HG4_Ill_GATKHCSBGrefine_2662:HG4_10X_allpass_689:HG2_PB_SVrefine2PB10Xhap12_2776:HG2_PB_SVrefine2Falcon2Bionano_1778:HG2_Ill_scalpel_3729:HG2_Ill_manta_1069:HG2_Ill_breakscan11_513:HG2_Ill_SpiralSDKrefine_11574:HG2_Ill_GATKHCSBGrefine_2558;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2810:HG4_Ill_scalpel_3658:HG4_Ill_manta_923:HG4_Ill_SVrefine2DISCOVARDovetail_2927:HG4_Ill_GATKHCSBGrefine_2662:HG4_10X_allpass_689:HG2_PB_SVrefine2PB10Xhap12_2776:HG2_PB_SVrefine2Falcon2Bionano_1778:HG2_Ill_scalpel_3729:HG2_Ill_manta_1069:HG2_Ill_breakscan11_513:HG2_Ill_SpiralSDKrefine_11574:HG2_Ill_GATKHCSBGrefine_2558;NumExactMatchSVs=13;ClusterMaxShiftDist=0.035443;ClusterMaxSizeDiff=0.035443;ClusterMaxEditDist=0.035443;PBcalls=5;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-199;DistBack=6287;DistForward=-189;DistMin=-189;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=3:159428986-159429199;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2617.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:16:0|1:25:0:2:16:./.:0:0:0:0:0/1:15:17:./.:.:.:.:.:.
chr3	161246712	HG3_Ill_GATKHCSBGrefine_2571	CAGAATGTGTCATTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG3_PB_HySA_5892:HG4_PB_HySA_5697:HG2_PB_assemblyticsPBcR_17820:HG2_PB_SVrefine2PBcRplusDovetail_7685:HG4_Ill_GATKHCSBGrefine_2665:HG2_Ill_GATKHCSBGrefine_2562:HG4_Ill_manta_925:HG2_PB_SVrefine2PB10Xhap12_2781:HG2_Ill_manta_1073:HG3_PB_assemblyticsfalcon_18320:HG4_PB_assemblyticsfalcon_18030:HG2_Ill_MetaSV_3380:HG4_Ill_Spiral_319:HG2_Ill_Spiral_268:HG4_Ill_Krunchall_5628:HG3_PB_pbsv_3701:HG3_Ill_Krunchall_5323:HG4_Ill_Krunchall_5627:HG2_Ill_Krunchall_5405:HG4_PB_pbsv_3814:HG4_Ill_MetaSV_3525:HG3_Ill_MetaSV_3547:HG2_Ill_tnscope_406:HG4_PB_SVrefine2PBcRDovetail_1957:HG4_PB_SVrefine2Falcon1Dovetail_2304:HG4_Ill_scalpel_3662:HG4_Ill_SVrefine2DISCOVARDovetail_2935:HG4_Ill_GATKHCSBGrefine_2664:HG4_10X_allpass_691:HG3_PB_SVrefine2PBcRDovetail_1765:HG3_PB_SVrefine2Falcon1Dovetail_2365:HG3_Ill_scalpel_3845:HG3_Ill_GATKHCSBGrefine_2571:HG3_10X_allpass_736:HG2_PB_pbsv_3772:HG2_PB_SVrefine2Falcon2Bionano_1781:HG2_Ill_scalpel_3734:HG2_Ill_breakscan11_514:HG2_Ill_SVrefine2DISCOVARplusDovetail_8965:HG2_Ill_MetaSV_3379:HG2_10X_allpass_591:HG2_10X_SVrefine210Xhap12_2817;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2817:HG2_10X_allpass_591:HG2_Ill_MetaSV_3379:HG2_Ill_SVrefine2DISCOVARplusDovetail_8965:HG2_Ill_breakscan11_514:HG2_Ill_scalpel_3734:HG2_PB_SVrefine2Falcon2Bionano_1781:HG2_PB_pbsv_3772:HG3_10X_allpass_736:HG3_Ill_GATKHCSBGrefine_2571:HG3_Ill_scalpel_3845:HG3_PB_SVrefine2Falcon1Dovetail_2365:HG3_PB_SVrefine2PBcRDovetail_1765:HG4_10X_allpass_691:HG4_Ill_GATKHCSBGrefine_2664:HG4_Ill_SVrefine2DISCOVARDovetail_2935:HG4_Ill_scalpel_3662:HG4_PB_SVrefine2Falcon1Dovetail_2304:HG4_PB_SVrefine2PBcRDovetail_1957;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0971168;ClusterMaxSizeDiff=0.0971168;ClusterMaxEditDist=0.266867;PBcalls=15;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=535;DistForward=-327;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:161246713-161247063;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.997;PctRecOverlap=0.9524;SizeDiff=1;StartDistance=-16;EndDistance=-15;GTMatch=0;TruScore=98;MatchId=2618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:29:0|1:27:3:1:23:./.:0:0:0:0:0/1:25:20:0/1:14:7:.:.:.
chr3	161605029	HG2_Ill_GATKHCSBGrefine_2566	CATATATATATATATATATATATATATGCCATATATATACTTGCCATATATATATATATGGCCATATATACTTGCCATATATATATATGCCATATATATATACTATGCCATATATATGCCATATATATGTATATATGCATATATATACTATGCCATATATACTTGCCATATATATATATATATGGCCATATACTTGCCACACACACACATATATATATATATATATGGCCATATAATTGCCAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2818:HG4_Ill_Krunchall_5632:HG2_Ill_MetaSV_3381:HG4_Ill_manta_926:HG4_Ill_GATKHCSBGrefine_2668:HG4_10X_allpass_692:HG2_Ill_scalpel_3738:HG2_Ill_GATKHCSBGrefine_2566:HG2_Ill_breakscan11_515:HG4_PB_pbsv_3815:HG2_PB_pbsv_3773:HG4_PB_SVrefine2Falcon1Dovetail_2305:HG4_Ill_SVrefine2DISCOVARDovetail_2936:HG2_PB_SVrefine2Falcon1plusDovetail_8288;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2566:HG2_Ill_scalpel_3738:HG4_10X_allpass_692:HG4_Ill_GATKHCSBGrefine_2668:HG4_Ill_manta_926;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0165289;ClusterMaxSizeDiff=0.0165289;ClusterMaxEditDist=0.0206612;PBcalls=4;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-242;DistBack=-141;DistForward=-229;DistMin=-229;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=3:161605014-161605285;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:27:./.:15:13:11:2:./.:0:0:0:0:0/1:27:25:./.:.:.:.:.:.
chr3	161635511	HG3_Ill_GATKHC_6361	GGATATATATACTGCTAAGTAACTATATATATGCTAGGGATATATATATATATATATATATATGAGAATATATATACATATATATAAGATATATACATATATATATATATAAATATGTATATATTTGAGCAGTATGGTCATTATACAAGCATATTATACAAGCACCAGTATATAAGCTAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2819:HG3_Ill_Krunchall_5328:HG2_PB_pbsv_3774:HG2_Ill_Krunchall_5411:HG3_Ill_Spiral_4172:HG3_PB_pbsv_3702:HG3_Ill_MetaSV_3548:HG3_Ill_GATKHC_6361:HG3_Ill_GATKHCSBGrefine_2573:HG3_10X_allpass_737:HG2_Ill_manta_1074:HG2_Ill_SpiralSDKrefine_11584:HG2_Ill_MetaSV_3382:HG2_Ill_GATKHC_6296:HG2_Ill_GATKHCSBGrefine_2567:HG2_Ill_Spiral_269:HG2_PB_SVrefine2PB10Xhap12_2783:HG2_PB_SVrefine2Falcon2Bionano_1782:HG2_Ill_SVrefine2DISCOVARplusDovetail_8967;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2567:HG2_Ill_GATKHC_6296:HG2_Ill_MetaSV_3382:HG2_Ill_SpiralSDKrefine_11584:HG2_Ill_manta_1074:HG3_10X_allpass_737:HG3_Ill_GATKHCSBGrefine_2573:HG3_Ill_GATKHC_6361:HG3_Ill_MetaSV_3548;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0110497;ClusterMaxSizeDiff=0.0110497;ClusterMaxEditDist=0.0166205;PBcalls=4;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-180;DistBack=14351;DistForward=-156;DistMin=-156;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=44;REFWIDENED=3:161635489-161635712;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2620.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:29:./.:25:16:7:11:./.:0:0:0:0:0/1:22:13:./.:.:.:.:.:.
chr3	161818066	HG2_Ill_GATKHCSBGrefine_2570	GGCACCCCAGCAGCAAGGGATACAGAAGAAGCAAGTAATAGGATTATGAATGGCATAAAACAATTTGTATGCATTTCCTTGAGCTCATCACATTGGTGCTCCATATAAAATCAAAGTTTACTTCACAAGGAATATGAGTGACAGTGGATATTAGGTAGTCAAATATGAGTAATTTTCT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_3776:HG3_Ill_Krunchall_5335:HG2_Ill_Krunchall_5417:HG3_Ill_Cortex_2515:HG2_Ill_Cortex_5884:HG3_Ill_MetaSV_3549:HG3_PB_SVrefine2PBcRDovetail_1767:HG3_Ill_svaba_4901:HG3_Ill_scalpel_3851:HG3_Ill_manta_861:HG3_Ill_SVrefine2DISCOVARDovetail_2936:HG3_Ill_GATKHCSBGrefine_2576:HG3_10X_allpass_738:HG2_PB_assemblyticsfalcon_18421:HG2_PB_SVrefine2PBcRplusDovetail_7687:HG2_PB_SVrefine2PB10Xhap12_2784:HG2_PB_SVrefine2Falcon2Bionano_1783:HG2_PB_SVrefine2Falcon1plusDovetail_8289:HG2_Ill_svaba_4813:HG2_Ill_manta_1075:HG2_Ill_SpiralSDKrefine_11589:HG2_Ill_GATKHCSBGrefine_2570:HG2_10X_allpass_592:HG2_10X_SVrefine210Xhap12_2820:HG3_Ill_Spiral_4178:HG2_Ill_Spiral_270:HG2_PB_assemblyticsPBcR_17828:HG3_PB_pbsv_3704;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2820:HG2_10X_allpass_592:HG2_Ill_GATKHCSBGrefine_2570:HG2_Ill_SpiralSDKrefine_11589:HG2_Ill_manta_1075:HG2_Ill_svaba_4813:HG2_PB_SVrefine2Falcon1plusDovetail_8289:HG2_PB_SVrefine2Falcon2Bionano_1783:HG2_PB_SVrefine2PB10Xhap12_2784:HG2_PB_SVrefine2PBcRplusDovetail_7687:HG2_PB_assemblyticsfalcon_18421:HG3_10X_allpass_738:HG3_Ill_GATKHCSBGrefine_2576:HG3_Ill_SVrefine2DISCOVARDovetail_2936:HG3_Ill_manta_861:HG3_Ill_scalpel_3851:HG3_Ill_svaba_4901:HG3_PB_SVrefine2PBcRDovetail_1767;NumExactMatchSVs=18;ClusterMaxShiftDist=0.011236;ClusterMaxSizeDiff=0.011236;ClusterMaxEditDist=0.0225352;PBcalls=9;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-177;DistBack=4134;DistForward=-175;DistMin=-175;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:161818067-161818243;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2621.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:41:./.:12:26:13:8:./.:0:0:0:0:0/1:33:15:./.:.:.:.:.:.
chr3	162408296	HG3_Ill_GATKHCSBGrefine_2578	CTATGTTTCTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGCGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTGTGTTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_516:HG3_PB_SVrefine2PBcRDovetail_1771:HG4_PB_assemblyticsfalcon_18042:HG2_PB_assemblyticsPBcR_17833:HG3_PB_assemblyticsfalcon_18331:HG2_PB_assemblyticsfalcon_18430:HG4_Ill_Krunchall_5647:HG3_Ill_Krunchall_5344:HG4_PB_HySA_5714:HG3_Ill_Spiral_4184:HG2_Ill_Spiral_271:HG4_PB_pbsv_3818:HG2_PB_HySA_7209:HG4_Ill_MetaSV_3526:HG3_Ill_MetaSV_3550:HG2_Ill_tnscope_407:HG2_Ill_MetaSV_3383:HG4_PB_SVrefine2PBcRDovetail_1960:HG4_PB_SVrefine2Falcon1Dovetail_2308:HG4_Ill_svaba_4935:HG4_Ill_scalpel_3671:HG4_Ill_manta_928:HG4_Ill_SVrefine2DISCOVARDovetail_2940:HG4_Ill_GATKHCSBGrefine_2673:HG4_10X_allpass_694:HG3_PB_pbsv_3709:HG3_PB_SVrefine2Falcon1Dovetail_2368:HG3_Ill_svaba_4910:HG3_Ill_manta_863:HG3_Ill_SVrefine2DISCOVARDovetail_2943:HG3_Ill_GATKHCSBGrefine_2578:HG3_10X_allpass_739:HG2_PB_pbsv_3785:HG2_PB_SVrefine2PBcRplusDovetail_7689:HG2_PB_SVrefine2PB10Xhap12_2788:HG2_PB_SVrefine2Falcon2Bionano_1788:HG2_PB_SVrefine2Falcon1plusDovetail_8293:HG2_Ill_svaba_4821:HG2_Ill_scalpel_3746:HG2_Ill_manta_1077:HG2_Ill_SVrefine2DISCOVARplusDovetail_8975:HG2_Ill_GATKHCSBGrefine_2574:HG2_10X_allpass_593:HG2_10X_SVrefine210Xhap12_2825;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2825:HG2_10X_allpass_593:HG2_Ill_GATKHCSBGrefine_2574:HG2_Ill_SVrefine2DISCOVARplusDovetail_8975:HG2_Ill_manta_1077:HG2_Ill_scalpel_3746:HG2_Ill_svaba_4821:HG2_PB_SVrefine2Falcon1plusDovetail_8293:HG2_PB_SVrefine2Falcon2Bionano_1788:HG2_PB_SVrefine2PB10Xhap12_2788:HG2_PB_SVrefine2PBcRplusDovetail_7689:HG2_PB_pbsv_3785:HG3_10X_allpass_739:HG3_Ill_GATKHCSBGrefine_2578:HG3_Ill_SVrefine2DISCOVARDovetail_2943:HG3_Ill_manta_863:HG3_Ill_svaba_4910:HG3_PB_SVrefine2Falcon1Dovetail_2368:HG3_PB_pbsv_3709:HG4_10X_allpass_694:HG4_Ill_GATKHCSBGrefine_2673:HG4_Ill_SVrefine2DISCOVARDovetail_2940:HG4_Ill_manta_928:HG4_Ill_scalpel_3671:HG4_Ill_svaba_4935:HG4_PB_SVrefine2Falcon1Dovetail_2308:HG4_PB_SVrefine2PBcRDovetail_1960;NumExactMatchSVs=27;ClusterMaxShiftDist=0.164384;ClusterMaxSizeDiff=0.164384;ClusterMaxEditDist=0.164384;PBcalls=17;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=-89;DistForward=-290;DistMin=-290;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=3:162408297-162408626;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2622.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:15:61:./.:11:27:0:21:./.:0:0:0:0:1/1:0:55:./.:2:12:.:.:.
chr3	162717307	HG2_PB_assemblyticsfalcon_18435	AACAGAATCTGAATTAGTTGTACAAATTTAAAAGTCAAGAGATTTCATATAAATATCTGGATTTGTTTTCTAAAACATTTTGAACACACCTTGACATAATTCCTAATTTTGCTTAACCCGAATTATGTATGTTTCTCCCATTAAGCTGTGCTGACTGTCTCTAGTTCATTATAGCCCTTACCATGCACCAGTAACTACTTTGATTAACTTAATATTTCCCTTTGCTCATTTATATTAGTTCCCTACCTGTACTAATATGACATTATATGTAAGAGACTATATACTTAATTGTATTAATCTGCTTAGTCTTCCATAACAAAATACCACAGACCAGGTGGCACAAACAACAGAAATTTGTTTTCTCAATTCTGGAAGCTAGAAGTTCATGATCAAGATGCCAGAAAATTTGCTTTCTGGCAAGGATTCTGTTCTTGGCTTATAGATGGCGCTTTTGTTTTTGTGTCTTCATGTAGCCTTTCTTTTGTGCATGTGGACAGAGTGATCCCTGGCATCACTTCTTTTTTTTTTATAAGGATACTACTTCTATGAAATCATATTCAAAATCTTTATTATTTCATTTAGCTTAATTATCTCTAACAGATCTGATATGTTTAGGCTTTGTGTCCTCACCCAAATCTATCTCATCTTGAACCCTAATACCGAGGTGTTGAGGGAGAGACCTGGTGGGAGGTGAACATAGAGGTGGTTCCCCTCATACTGTTCTGGTGACAGTGAGTGAGTTCTCACAAGGTCTGATGGTTTTATAAGGCAGTTTTCCCTACTCTTGCACACTTTCTCTTTCCTTCCACTATGTGAATAAGGTCTTTGCTTCCCCTTCACATTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCAAGCTATGTGGAACTGTAAGTCAGTTAAACCTCCTTCCCTTATAAATTACCCAGTCTCAAGTATTTTTTTATAGCCGTGTGAAAACGGACTAATACTGTATCCTATTTACAAATGCAGTCATAGTGGGGGTTGAAGCTTCAACATATCAACATATAAATTGTGGGGGTGGGGGAGAACAATTTAGTACATAACATTTATATTTTGTTGTATAATTAGAACTGATCCTTATTGACAGACTGCTTAGTATAGTCCCTCAGTAATCCCTTGGTTGAGTATATTCAATGTTTACTGGCATTTTACACCACATTTTCTAGACATCTCTTGTTTCAAGAAATATTTATTGCACTGCTCAATGTTCAAATACTGTTCTGTAAGTTGAAAAATCTCATGAATAAAATGGGAAAAAAAGCCTGCTCAGAAATTTCTTGCATTCTAGTGAGGAGGTGAGACACAATAAATAAAATAAAAACAGTATAACATGGTAAAGATAATAAGTACTGTGGTAATGAATATATTATCAAAAATAAATAAAAGAAAGGGGGTAGAGAATAATAAAGGAAGAGTCACAGAATGCAATTTAAAATAGAGCTACCTGGAAAATTATCTTTGGAAAGGTGGCCTTAAACAGAATTAAAGGAGGTGAAAGACTAAGTTATGTGGATATTTGGAGGAAGAATATTTCAGATAGAGGGAAATGCAAAGACAAAGGCTGTAATGCAGAAGCATTTCTGACATGCTTAAAGAAGAGCTGAGTCAAGTGCAGTTGGAGCTAAACAAGTGGTTAAGAGGTAGTAGGAAAGATATTAAGAGAGGCATCAGAAGGGCCTTGGAGGCCATACGGGATTTATGTTTACTCCCTATTAGATTACTTTACTAGGACCTGGGAAAAGGAGTCAATGACTCTTGCATGGTCAAGACTGATTTTGTCTAAATCATTTTATTAAACTCAAGTGTGCCTAGGTATAAAATGATTTGGTCACACTTTTCTTCAGTATATTTGCAAATTTTATTTTATTGTATTCCATTGTGGAATTTTGCTACAGAAAATTTCGATGCTAGTCTCCATTTTTTCACCTTTTGAATAAAAGTTTATTTTGCCAGATTTTCCAAAAAAATTTTTTTATTTGTAAAGTATATTATTTTTTTTAGATTTTAAAACACGATGTGCCATTTTAATGGTACATTAAGACTTCTATTTAAATTTGAATTTTTTATTTTATTTTTATTTTGTTATTTTAACAGTTTCCTTTTGGGGCATATGTTGGAGCTTCTTTAGACATTTAAAATATAGATAGCTGTTTTCTAATTATTTTTAACTCTTCATCCAGACATCATTTTGTTTAATTTACTCATTCATATTTTTATACGGCCTCCACTTGGAAAATTATTCTGCTTCTTTTAGCATAAAATTTTACTTTCATTTGTATTATGACTCTTTCATTTGTATTATGACTATATCATTTACCTGTTTTTGGAGCTCTTTTCATTTATACTAGATTTCTTCCTTTTTGCCATGAGATTTGTTACATAAGCTGTTGTAATTTTGCTTTGTATTCTTGCCTCATAGAGGCAACTGCTTTACTGTGTGTATGTGTATGGGGGGATGAAGTGGTATGTGTCAGGGTGATTGTCTTTATGTTTATGGAGAATTATTTAGCTACAATATTTTCAAATTCTTTGTAATTATTTTTCTAGTGATTGTCTTTGCTTTTAAAATTTGCATGCATTTTTGAGCTTTTTGTAGTTTTTATGATTATTATAGGTCTTATAAATGCTTCCATTTTTCAGAATAGTTATTTATAAATATAAATAGTTTATATGTAAGTTTCTATTGCAGGAGTTGATAGCTGTGCAAGATATTTTGAGTCATGTAGAACAATTCATAAAGATAAAAAGGTTTGAGTATGTATTCAATGTTACCTTCAAAACATCTCAGCCAAGCATATAGAGAGATTTGGGTCACCATGCAAATACCTCAACCAACAACTAAGACCCAGAAACTTTCACTTTCTGAAAATATGGCTTGACTGTGATATTACTTATTAAGCCTCTAATACTTTAGTCTTTAAAGCAAAAGTATGTATTTTCCTCTTTTGGAAACAAGGGATTTTGCCTTGTACCTGAAGGGGCAGCAGTTAAGTTTGAAATGTACCTTAGATTTTGATACCTGTTGCCATAGGTTCTTCTCTATTCTTCTCAAATTTATCTCTTCTCTATTTTATTGCTTTGAAAATTCTTTGTATCATTCTATAGTTTTGAGGGTTTTTGGGGATTGGTTTTTATATTTATCTCTGTTTTTGCCAAATGTAACTTTATGTATTTTTTTTTTGCCCCCTGTTGCTTTTAGGTGATTTTTTTAAGAAGAGTAGGTGACTGTGGGATGCAACATTTGATCTAAGTTATATTTTTTCAATATTTACTGTTTGCTCTTAATTTTTGTTTTTGTTTTTGTTTTTTACAAACGGTTTTTCATTTACTAGCAATTTAATCTGGACAGGCTCATTGAAACTAGATTTTCTCCATGTTGTCATGTACAAAAAAGAATCTGTTGCCTTTCTATAAAAAATAAAAGTTTGATAGGACTTAAACATTTTAAATCTTTGTTTTTTACCTCAAGGCCATGACAGACATTGTTACAGTATGTCCATACAGTGCACATCCCTGTAGAGACATTTCTCCTAGATTACTGCTGTATCCTATTCAAGAGGATAACTTACAATAGATTATGATTCCCATTTTAATCACAATACAATTGATATTTTAGGAAGATTTATGTGTACAGTCACATGTGCAATATGTTTATAAACCAGAGCTTTAGAGTATCTATTGCAAATAACAGAATTACAAAAATCGAATCCAGGAGTTATCATGTTTTATACTATGCTGTTAATACTGATGGTTCTAAGCAACTTTTGCTTGATTTTCAGAAATTTTGTAAGCTTGTCATTCAATAAAACATTATTCAAAATTAAATTCCAAAATTTTAAATAGAATATATTAGTACTAATTATATTAGTAGCTCAAAATTCATCACTTCTGAGTATTTCATTACATTTATTATTACTATTCTCTTAGGTTTATTGACGTCTGTTTCTGTATGGTGAGAATACTACAACTATGATGCATCTCTTCCAAATTGTGATAACACATTGTAACATGAAATCAGTCACAACTGGAATATTTGCACCTTGAAATAGGTGAAACTAAAAATCAGGTCTTGGTTTATTTTGTTGTTTCTTTTGTACACACATAAGTGACAGAGAATTTGTTAATATCGTAGATTAAATATCTGGTTCAGGAAAGAAGTCACACACATCAATAACAAATAAGTGAAGGTTTGACATAGAGCTAAAGCTGAAAGTTTTGAGTTTAATGAATATAATATGTATGATGGTGATAAATAGCTTTAGAGTTCATCACATATCAGTTATAATGGGAATAGCTTTATTGGGATATTGAAACTAGATGATTGACAGGGGAATATGAATATGATAATTTGATTCTCTGAACTTTAAAGAATTTCATTCGGAAGAAAAAAACATTCTTCTAACTGCCTCAGTAAATCATACTAATAAGCTGAGTGGTATTTAGTTTCTTTCTCTTTTCATTAATCCACCAATTATGTCTCTCTAAGATATTTCAAGAAGTACAGTTGTCCGTATTTCACGTGATGGCTGCTCTCATTGTTAAAAAAAAAAAACACAAATTTTTATAAGAACTCAGTGAATACATTTTGCAAGAAGACCAAGCTTTTTAGTCAAGGGCTCTTATTTTCTCATTTTGGATTAGGAGATGGAGATAAGAGGTAGATTTACTCAGTCTAGTATTCTGTTAGCAAATAGCTTCAAGGACTTAAACGCAAAAAGCTGTATAGCCCTTAAGATAAAAAATTAAGAAGCAATTCAAGATTAATCTCGATTTGTGTGATGCTTAAAGCATTTCATTTATATCACAAATAACAAATTGATGAAATAAAAAAGATAAAATGTCTTAATTTTTAAACTATAAATGTTATCTTAAATGGAATCCACATAGTCAAATATTAGTACAGGAACAAATATGAAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCCTGAAAATGGCCATACTGCCAAGGTAATTTATAGATTCAATGCCATCCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCTGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCATACTACACTACAAGCCCACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCGTATCTACAACTATCTGAACTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTCACACCTTATACAAAAATTAATTCAAGATGGATTAAAGGCTTAAACATTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAAGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATTAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTTGGATGGTAAACTAGTTCAATCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAACACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGAACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTACTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATTCACCATGGAATACTATGCAGCCATAA	CAGT	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3551:HG3_PB_pbsv_3710:HG2_PB_pbsv_3786:HG2_Ill_tnscope_408:HG3_PB_SVrefine2PBcRDovetail_1772:HG2_PB_assemblyticsfalcon_18435:HG2_PB_SVrefine2PBcRplusDovetail_7691:HG2_PB_SVrefine2PB10Xhap12_2789:HG2_PB_SVrefine2Falcon1plusDovetail_8294:HG3_PB_assemblyticsfalcon_18336:HG3_PB_SVrefine2Falcon1Dovetail_2370:HG2_Ill_MetaSV_3385:HG2_PB_assemblyticsPBcR_17837;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8294:HG2_PB_SVrefine2PB10Xhap12_2789:HG2_PB_SVrefine2PBcRplusDovetail_7691:HG2_PB_assemblyticsfalcon_18435:HG3_PB_SVrefine2PBcRDovetail_1772;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0295116;ClusterMaxSizeDiff=0.0295116;ClusterMaxEditDist=0.0295116;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-6244;DistBack=-6248;DistForward=-5619;DistMin=-6248;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:162717307-162723554;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9997;PctRecOverlap=0.9992;SizeDiff=2;StartDistance=-5;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2623.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:62:./.:39:14:13:20:./.:0:0:0:0:0/1:45:15:0/1:382:212:10586:.:.
chr3	162764902	HG3_Ill_SVrefine2DISCOVARDovetail_2946	ATTTGTGTGTATGTGTGTGTTATGTTCTGTGTATATTGGGTTGCAATATAAAATTTACTTCTATCTTTCAGTTGTAGTAAAAAAGTTTGAAAGTCATTGTGGTAATTTACATAGTCCTCTCTCCCTTCATCTTTCGGGGTAGAGAGCAATATACAATTATTTAAGCATTTTTTCAAAGGAGACTTGTGCTGGCTGAAGAAAAGATTTAAATTGTTGAATTAACAAATTCACACATATAGTGCCATGACTCAGGACAAAGTGACATTGTGGAATGGAGAAATTGCAGTGGAATGCAGTGGAGGAAGAATGACCTTTTGAAAATGATGTTAGGTCAATTGAATATACAAAGAAGGAAAAAAAACTTCCTCACATTCTACACAAAAAAACAATTTCAGATAGAATGTATATTAATCTAAAAAGTACAAAAGTAAGTCTATTAGAATAAAATGTAGGGGAATAATTGTCTTTCAGTTCAGTAAAGATATCTGAAAAGGAGTGCAAAAATTGCTACTATAAAGGAAAAATTTGATAATGTATAGTATATTTAAATTATAAATTAATCTATTATTAAGAATGTGAAAAATGTAACATAGAATGGAAAAAATATTTTAAATTTAATTCATATATACCTATACATACACACATATATGATAAAGGTGTTACATTCGACCTTGTTTCAAAACTAAAATCAGTAAGACAATCTAATAGAAAATTTGGAAAAAGATTTGAACAGGGCTTATAGACAAGAAGATATCAAAATATCCAAAAAAAGAGAAAAAAGTTCTAACTCATCAAGCAATAGTAAAATGCAAAACAAACTCAGAATGAGATGCTATATACAACACAACACCCACCAGGAGAGCTAAATGAAAAATGCTGACAAGACCTAGTATCGGCAAGAATGTAAAGAAAACAGAGCTCTTACACATTGCTGGTGGGAGAGTAAATGTGTATACCTATTTTGGTACTGTCTTTGGAAAACTCTTTCAGAATATGTCTAAGAGCTCATGATAGGCATTCTCTATAAGCAACAATTCAGATTTAAGGTATAAAACCCATATAAACAGATAGAGTCATGTAGTCATGTTCCGCATAACCACATTTCAGTCAGTGATGGATCCCATATTCTACAATGGTTCAGTAAGGATATAATGGAGCTACAAATTTTCCATTGACTAGTGACATGGTAACATTTTATCACAAGGCATTCCTCACATGTTTGTGGTGATGCTGGTGTAAACAAATCTACTGCTTTGCCAGTCATACAAAATGATAGAAAATATAACATGTACAGTACAGAACACTTAATACATAATATAATATGTATAGTACAGAACACACAATAATTAATGGTAGTCAATAAACAACAATGTTACTTGTTTATGTATTTACTATCCTACATTTTTATTGTTATTTTAGATGATACTCCTCTGCTTATTGAAAAAAAAAAAGTTAGCTGTAAAACAGCCTCAGGCAAGTCCTTCAGGAGATATTCCAGAGGAAGCTATTGTTATCATAGGAGATGACAGCTTCATGTGTGTTATTGCCCCTGGAGATCTTTCAGTGGGATAAGATGTGGAGGTGGAAGACAGTGATATTGATTATCCTGACCCTGTGTAGGCCAGGGCTAATGTGCGTGTTTCAGTCTTTGTTTTTAATAAAAAAGTTAAAACAATTAACAAGTTAGAAATATAAAAAAGCTTGTAGAAGAAGGAAATATAGAAGGTAAATATTTTGTGCAGCTGCACAATATGTTTGTGTTTTAAGCTGTTAGCACAAAAGGATCAACAGTTAAAAAATTAAATTTATAAAGTAAAAAAAAAAAAGTGACCATAAGCTAAGGCTAACTTATTGTAGAAAATGTTTTTAATAACTTTAAAGTACACTAAGTTTGCAGTTTTATGAAGTCTAAAGTAGTGTACCATTATGTTCTGGAGCTTCATTTTACTCACGACTCATTCAGTGACTCACAGAGCAACCTCTAGGCCTGCAAGCTCTATTCATGGTATGTGACCTAGAGACACATACCACTTTTTATCATTTATACCAAACTTTGTTGTGCTTTTTCTATGTTTAAATACACAAATATTTACCAAAGTGTTACAATTGCCTGCATATTTGGTATAGTAACATATTGTTCAGGTTTTAGTGTACTTCACAGGCTGGCTACATCATATATCCCAGGTATGTAGTAAGGTTTGTGTAAGGTTTCTATGTACACACTGTGACATTTGCACAACAAGAAATTACCTAATGATGCATTTCTGAGAATGTGTCCCCATTGTTAAGCAATACATGACTATATAAATATGTTTACCAAAAGAAATATACAAGAATTATTTACGGTTTCACAACTATAAGACCCAAACCTTGGAAGCAGCCCAGATATATATCCAGGATAGAATGGATTAAGGGATTTTGGTAGAGCTGTACTTTTGTATGACAACAGGAATTAATGGGCTACAACTATACATAACAATTAAAATGACTCTTGTATACACAGTGCTAATCAAAAGAGATTTTATACTCTTATAATTCTTTTTTTTCCAAATGGAGTCTCACTCTTGTCAACCAGGTTGGAGTGCAGTGACACGATCTCGGCTCACTGCAACCTTCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCGAAGCAATTGGGATTACAGGTGCATGCTACCACTCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCATCTTGTTGGCCAGACTGGTCTTGAACCTCTGACCACAGGTGATCCACCCACCTTAGCCTCCCAAAATGTTGGGATTACAGGCATGAGCCACCACACCCGGTCTTTTAATTCGTTTTTATATATTGTAGAATGGGCATAATTAAGCATAATTAATGGTGGTCAACATTGTACACTTGTTACCTCTGGAGGAGGTGAGTAGTGAAGGATGTTGACACGTTAAGGCCCTTATGGTGTTGATAACACTTTATTTCTCTTTCTAATTTTTCACACAAATGTACTCAGTTTGTTAAAATTTATCAGAATGGATATTCAGGATATGTGCATGCTTTTACTGTATATTTTTCAATAAAACGTTTACTTAAAACGTTCTTATTTTGTTACATTTAATTGATTGTATTGTTTAACTAAAATTAATTTTCCCCAAACCAAGTGGTAGGGAATTTGTGGAGAATAACACATCAGATATAGAAAATGTAGAAAGTATAGCGTCATGAGTAGTTTTTTTTTTATAACCATATATACAAATATTCATAGGTAGCCAAAACCTGAAGAACTAACTTTATTGTGAATTCCAGTTTGGTCAGTTACAAACCCTGTGACTGAATGTACACAAATTGTCAAAGTTCTATTTGTTCATCCTTAAAAAGGAGTACTACCTACCATAGATTTATTTGGGATTTTATTGAAATAGTATATTACTAAAAGACAAGATGCATAGTAAGCCCTTCGTAAATGCTATTTATCTTCCCTTTTGTTGTTTAAAATTATTTGAGGTTGCTTATATTCTATGAATGCTCCCTTCCTAAATTTTCATTTGGATCAAATTGGTTGAAAACACTATCAAATATTTTTCAAACCATTAAAACTCCCCATTACATACAAGGAAAAAGAAAAGTCCTCTCTAATTACGTTGGCTACTAAGACACTGTTAATCAGCAGTTTTGCCTAGCTATCTCTGGCAGAGGAAGCAGTTGTGGTAACAACAACTGGGTCACCTTCTTAACAACTTTATTATACAGTAGTTCATGTATTTTCTTGTTGTCAGATTTAGAGCACTTTGTGAAAACAATAATTGTACTGGGACTACGGCTGGCAGGCTTCCTTACTGAAAAAGAAGTCGAATGAGGTTGCTGTACTTTTAACTGTTAAAAGGCAAATGAAGCACTCTGTGTAGTTTTATCAAGGAATTACACTGGCTCTAACATTGAAACTAATTAATATTGTTTTGAATAGAAAATAGTGAATCTGTGCAATGTCTTCCTGAGAACAAGTTAGTGAATTCCTCATAAAAATGCTGTTTTGGGTTACCAGCACCAGAGGGATGTTTTGAACACAAGTAAAGGAGCCATAAAATGAATTGTTTGGGTGTGTTTAGTTCATTGAAATTCATGTTTCAAATAAAACAAGGCAAATCTTCCAAATCTTTTATGTAAATGACATTAAAAGGGAAGACAG	GT	20	PASS	ClusterIDs=HG3_Ill_Krunchall_5349:HG2_Ill_GATKHCSBGrefine_2576:HG3_PB_pbsv_3712:HG2_PB_pbsv_3788:HG4_PB_assemblyticsfalcon_18046:HG4_PB_pbsv_3820:HG2_PB_assemblyticsPBcR_17839:HG2_Ill_tnscope_409:HG4_PB_SVrefine2PBcRDovetail_1962:HG4_Ill_SVrefine2DISCOVARDovetail_2943:HG3_PB_assemblyticsfalcon_18338:HG3_PB_SVrefine2PBcRDovetail_1773:HG3_PB_SVrefine2Falcon1Dovetail_2371:HG3_Ill_SVrefine2DISCOVARDovetail_2946:HG2_PB_assemblyticsfalcon_18437:HG2_PB_SVrefine2PBcRplusDovetail_7693:HG2_PB_SVrefine2PB10Xhap12_2791:HG2_PB_SVrefine2Falcon2Bionano_1791:HG2_PB_SVrefine2Falcon1plusDovetail_8296:HG2_Ill_SVrefine2DISCOVARplusDovetail_8977:HG2_10X_SVrefine210Xhap12_2827:HG3_10X_allpass_740:HG2_10X_allpass_595:HG4_Ill_MetaSV_3528:HG4_10X_allpass_695:HG4_Ill_Krunchall_5651:HG2_Ill_Krunchall_5430:HG3_Ill_MetaSV_3552:HG2_Ill_MetaSV_3386;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2827:HG2_Ill_SVrefine2DISCOVARplusDovetail_8977:HG2_PB_SVrefine2Falcon1plusDovetail_8296:HG2_PB_SVrefine2Falcon2Bionano_1791:HG2_PB_SVrefine2PB10Xhap12_2791:HG2_PB_SVrefine2PBcRplusDovetail_7693:HG2_PB_assemblyticsfalcon_18437:HG3_Ill_SVrefine2DISCOVARDovetail_2946:HG3_PB_SVrefine2Falcon1Dovetail_2371:HG3_PB_SVrefine2PBcRDovetail_1773:HG3_PB_assemblyticsfalcon_18338:HG4_Ill_SVrefine2DISCOVARDovetail_2943:HG4_PB_SVrefine2PBcRDovetail_1962;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00167404;ClusterMaxSizeDiff=0.00167404;ClusterMaxEditDist=0.00167404;PBcalls=14;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-4181;DistBack=1158;DistForward=-4182;DistMin=-4182;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:162764902-162769084;PctSeqSimilarity=0.9999;PctSizeSimilarity=1;PctRecOverlap=0.9998;SizeDiff=0;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2624.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:105:1/1:4:35:0:20:./.:0:0:0:0:1/1:0:26:1/1:1:324:10586:.:.
chr3	163428072	HG4_Ill_GATKHCSBGrefine_2675	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTTCTTTCTTTCTTTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2830:HG2_PB_HySA_7221:HG2_PB_assemblyticsPBcR_17844:HG3_PB_HySA_5919:HG4_Ill_svaba_4945:HG4_Ill_GATKHCSBGrefine_2675:HG3_Ill_svaba_4924:HG3_Ill_GATKHC_6393:HG3_Ill_GATKHCSBGrefine_2580:HG2_Ill_svaba_4832:HG2_Ill_manta_1079:HG2_Ill_SpiralSDKrefine_11601:HG2_Ill_GATKHC_6328:HG2_Ill_GATKHCSBGrefine_2577:HG2_10X_allpass_596:HG3_PB_assemblyticsfalcon_18344:HG4_PB_pbsv_3821:HG3_PB_pbsv_3714:HG2_PB_pbsv_3789:HG4_PB_SVrefine2Falcon1Dovetail_2311:HG4_PB_SVrefine2PBcRDovetail_1964:HG4_Ill_SVrefine2DISCOVARDovetail_2944:HG3_PB_SVrefine2PBcRDovetail_1775:HG3_Ill_SVrefine2DISCOVARDovetail_2953:HG2_PB_SVrefine2PB10Xhap12_2793:HG2_PB_SVrefine2Falcon2Bionano_1793:HG2_PB_SVrefine2Falcon1plusDovetail_8298:HG2_Ill_SVrefine2DISCOVARplusDovetail_8979;NumClusterSVs=28;ExactMatchIDs=HG2_10X_allpass_596:HG2_Ill_GATKHCSBGrefine_2577:HG2_Ill_GATKHC_6328:HG2_Ill_SpiralSDKrefine_11601:HG2_Ill_manta_1079:HG2_Ill_svaba_4832:HG3_Ill_GATKHCSBGrefine_2580:HG3_Ill_GATKHC_6393:HG3_Ill_svaba_4924:HG4_Ill_GATKHCSBGrefine_2675:HG4_Ill_svaba_4945;NumExactMatchSVs=11;ClusterMaxShiftDist=0.125874;ClusterMaxSizeDiff=0.125874;ClusterMaxEditDist=0.125874;PBcalls=13;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-70;DistBack=16108;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=68;REFWIDENED=3:163428039-163428176;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:2:33:0:21:./.:0:0:0:0:1/1:0:16:./.:.:.:.:.:.
chr3	163464167	HG4_Ill_GATKHCSBGrefine_2676	AGCATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_5440:HG3_PB_HySA_5920:HG4_PB_assemblyticsfalcon_18052:HG2_PB_assemblyticsPBcR_17845:HG3_PB_assemblyticsfalcon_18345:HG2_PB_assemblyticsfalcon_18443:HG4_Ill_Spiral_320:HG3_Ill_Spiral_4193:HG2_Ill_Spiral_272:HG4_Ill_MetaSV_3529:HG3_Ill_MetaSV_3554:HG2_Ill_tnscope_410:HG4_PB_pbsv_3822:HG4_PB_SVrefine2PBcRDovetail_1965:HG4_PB_SVrefine2Falcon1Dovetail_2312:HG4_Ill_svaba_4946:HG4_Ill_scalpel_3678:HG4_Ill_manta_930:HG4_Ill_SVrefine2DISCOVARDovetail_2945:HG4_Ill_GATKHCSBGrefine_2676:HG3_PB_pbsv_3715:HG3_PB_SVrefine2PBcRDovetail_1776:HG3_PB_SVrefine2Falcon1Dovetail_2373:HG3_Ill_svaba_4926:HG3_Ill_scalpel_3862:HG3_Ill_manta_865:HG3_Ill_SVrefine2DISCOVARDovetail_2954:HG3_Ill_GATKHCSBGrefine_2581:HG3_10X_allpass_742:HG2_PB_pbsv_3790:HG2_PB_SVrefine2PBcRplusDovetail_7695:HG2_PB_SVrefine2PB10Xhap12_2794:HG2_PB_SVrefine2Falcon2Bionano_1794:HG2_PB_SVrefine2Falcon1plusDovetail_8299:HG2_Ill_svaba_4834:HG2_Ill_scalpel_3752:HG2_Ill_manta_1080:HG2_Ill_SVrefine2DISCOVARplusDovetail_8981:HG2_Ill_GATKHCSBGrefine_2578:HG2_10X_SVrefine210Xhap12_2831:HG4_Ill_Krunchall_5659:HG3_Ill_Krunchall_5357;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2831:HG2_Ill_GATKHCSBGrefine_2578:HG2_Ill_SVrefine2DISCOVARplusDovetail_8981:HG2_Ill_manta_1080:HG2_Ill_scalpel_3752:HG2_Ill_svaba_4834:HG2_PB_SVrefine2Falcon1plusDovetail_8299:HG2_PB_SVrefine2Falcon2Bionano_1794:HG2_PB_SVrefine2PB10Xhap12_2794:HG2_PB_SVrefine2PBcRplusDovetail_7695:HG2_PB_pbsv_3790:HG3_10X_allpass_742:HG3_Ill_GATKHCSBGrefine_2581:HG3_Ill_SVrefine2DISCOVARDovetail_2954:HG3_Ill_manta_865:HG3_Ill_scalpel_3862:HG3_Ill_svaba_4926:HG3_PB_SVrefine2Falcon1Dovetail_2373:HG3_PB_SVrefine2PBcRDovetail_1776:HG3_PB_pbsv_3715:HG4_Ill_GATKHCSBGrefine_2676:HG4_Ill_SVrefine2DISCOVARDovetail_2945:HG4_Ill_manta_930:HG4_Ill_scalpel_3678:HG4_Ill_svaba_4946:HG4_PB_SVrefine2Falcon1Dovetail_2312:HG4_PB_SVrefine2PBcRDovetail_1965:HG4_PB_pbsv_3822;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0494234;ClusterMaxSizeDiff=0.0494234;ClusterMaxEditDist=0.213333;PBcalls=16;Illcalls=24;TenXcalls=2;CGcalls=0;PBexactcalls=11;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=-484;DistForward=-299;DistMin=-484;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=3:163464168-163464481;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2626.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:91:1/1:1:41:1:28:./.:0:0:0:0:1/1:0:48:0/1:2:8:.:.:.
chr3	165578890	HG2_PB_pbsv_3794	GTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGAAAGGAGTCTCGCTCTGTCTCCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAAGCTCCACCTCCCGGGTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	G	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2316:HG4_PB_pbsv_3830:HG3_Ill_GATKHCSBGrefine_2592:HG4_Ill_GATKHCSBGrefine_2685:HG2_Ill_GATKHCSBGrefine_2588:HG4_Ill_MetaSV_3532:HG3_Ill_GATKHCSBGrefine_2591:HG2_Ill_GATKHCSBGrefine_2587:HG4_PB_HySA_5735:HG2_PB_HySA_7237:HG4_Ill_manta_933:HG3_PB_SVrefine2PBcRDovetail_1780:HG3_Ill_Krunchall_5372:HG2_Ill_Krunchall_5454:HG3_PB_SVrefine2Falcon1Dovetail_2377:HG3_Ill_SVrefine2DISCOVARDovetail_2962:HG2_PB_SVrefine2PBcRplusDovetail_7699:HG2_PB_SVrefine2Falcon2Bionano_1798:HG2_PB_SVrefine2PB10Xhap12_2799:HG2_PB_SVrefine2Falcon1plusDovetail_8304:HG3_PB_HySA_5938:HG4_Ill_SVrefine2DISCOVARDovetail_2955:HG2_PB_pbsv_3794:HG2_Ill_SVrefine2DISCOVARplusDovetail_8988:HG2_10X_SVrefine210Xhap12_2836:HG3_PB_pbsv_3720:HG4_PB_SVrefine2PBcRDovetail_1970:HG3_Ill_manta_867;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8988:HG2_PB_pbsv_3794:HG4_Ill_SVrefine2DISCOVARDovetail_2955;NumExactMatchSVs=3;ClusterMaxShiftDist=0.338583;ClusterMaxSizeDiff=0.338583;ClusterMaxEditDist=0.338583;PBcalls=14;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-274;DistBack=-640;DistForward=-270;DistMin=-640;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=164;REFWIDENED=3:165578891-165579328;PctSeqSimilarity=0.9418;PctSizeSimilarity=0.9821;PctRecOverlap=0.8321;SizeDiff=-5;StartDistance=-42;EndDistance=-47;GTMatch=0;TruScore=91;MatchId=2627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:72:./.:0:2:0:65:./.:0:0:0:0:0/1:11:23:./.:.:.:.:.:.
chr3	170119564	HG4_Ill_scalpel_3706	CAAAAAACTAAATAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_517:HG3_PB_pbsv_3734:HG3_Ill_Krunchall_5394:HG2_PB_pbsv_3808:HG4_Ill_Krunchall_5696:HG2_Ill_Krunchall_5474:HG4_PB_HySA_5757:HG4_PB_pbsv_3840:HG3_Ill_MetaSV_3560:HG4_Ill_MetaSV_3535:HG2_Ill_tnscope_411:HG2_Ill_MetaSV_3392:HG4_PB_SVrefine2Falcon1Dovetail_2326:HG4_Ill_scalpel_3706:HG4_Ill_manta_936:HG4_Ill_SVrefine2DISCOVARDovetail_2978:HG4_Ill_GATKHCSBGrefine_2692:HG4_10X_allpass_698:HG3_PB_SVrefine2PBcRDovetail_1789:HG3_PB_SVrefine2Falcon1Dovetail_2391:HG3_PB_HySA_5972:HG3_Ill_scalpel_3891:HG3_Ill_manta_872:HG3_Ill_SVrefine2DISCOVARDovetail_2987:HG3_Ill_GATKHCSBGrefine_2601:HG3_10X_allpass_747:HG2_PB_SVrefine2PBcRplusDovetail_7706:HG2_PB_SVrefine2PB10Xhap12_2809:HG2_PB_SVrefine2Falcon2Bionano_1804:HG2_PB_SVrefine2Falcon1plusDovetail_8314:HG2_Ill_scalpel_3775:HG2_Ill_manta_1086:HG2_Ill_SVrefine2DISCOVARplusDovetail_9005:HG2_Ill_GATKHCSBGrefine_2595:HG2_10X_SVrefine210Xhap12_2850;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2850:HG2_Ill_GATKHCSBGrefine_2595:HG2_Ill_SVrefine2DISCOVARplusDovetail_9005:HG2_Ill_manta_1086:HG2_Ill_scalpel_3775:HG2_PB_SVrefine2Falcon1plusDovetail_8314:HG2_PB_SVrefine2Falcon2Bionano_1804:HG2_PB_SVrefine2PB10Xhap12_2809:HG2_PB_SVrefine2PBcRplusDovetail_7706:HG3_10X_allpass_747:HG3_Ill_GATKHCSBGrefine_2601:HG3_Ill_SVrefine2DISCOVARDovetail_2987:HG3_Ill_manta_872:HG3_Ill_scalpel_3891:HG3_PB_HySA_5972:HG3_PB_SVrefine2Falcon1Dovetail_2391:HG3_PB_SVrefine2PBcRDovetail_1789:HG4_10X_allpass_698:HG4_Ill_GATKHCSBGrefine_2692:HG4_Ill_SVrefine2DISCOVARDovetail_2978:HG4_Ill_manta_936:HG4_Ill_scalpel_3706:HG4_PB_SVrefine2Falcon1Dovetail_2326;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0738462;ClusterMaxSizeDiff=0.0738462;ClusterMaxEditDist=0.0738462;PBcalls=12;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=13842;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=333;REFWIDENED=3:170119565-170120210;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2628.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:57:1/1:3:26:4:23:./.:0:0:0:0:1/1:0:50:./.:2:12:.:.:.
chr3	171716408	HG3_Ill_SVrefine2DISCOVARDovetail_2994	GTTTACAATCCCTGAGCTAGACATAAAGGTTCTCCAAGGCCCCACCAGAGCAGCTAGATACAGAGTGTGGATTGGTGCACTCACAAACCTTGAGCTAAACATAGGGTGCTGATTGGTGTA	G	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_2330:HG4_Ill_SVrefine2DISCOVARDovetail_2985:HG3_PB_SVrefine2PBcRDovetail_1793:HG3_Ill_SVrefine2DISCOVARDovetail_2994:HG2_PB_SVrefine2PBcRplusDovetail_7710:HG2_PB_SVrefine2PB10Xhap12_2813:HG2_PB_SVrefine2Falcon2Bionano_1807:HG2_Ill_SVrefine2DISCOVARplusDovetail_9013:HG2_10X_SVrefine210Xhap12_2858:HG4_PB_SVrefine2PBcRDovetail_1980:HG2_PB_assemblyticsPBcR_17895:HG4_PB_pbsv_3845:HG2_PB_HySA_7285:HG4_Ill_GATKHCSBGrefine_2696:HG4_10X_allpass_699:HG3_Ill_GATKHCSBGrefine_2605:HG3_10X_allpass_749:HG2_Ill_GATKHCSBGrefine_2598:HG2_10X_allpass_598:HG3_PB_pbsv_3741:HG2_PB_pbsv_3813;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2858:HG2_Ill_SVrefine2DISCOVARplusDovetail_9013:HG2_PB_SVrefine2Falcon2Bionano_1807:HG2_PB_SVrefine2PB10Xhap12_2813:HG2_PB_SVrefine2PBcRplusDovetail_7710:HG3_Ill_SVrefine2DISCOVARDovetail_2994:HG3_PB_SVrefine2PBcRDovetail_1793:HG4_Ill_SVrefine2DISCOVARDovetail_2985;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0251046;ClusterMaxSizeDiff=0.0251046;ClusterMaxEditDist=0.05;PBcalls=11;Illcalls=6;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-119;DistBack=-69;DistForward=-102;DistMin=-102;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=149;REFWIDENED=3:171716308-171716575;PctSeqSimilarity=0.9808;PctSizeSimilarity=1;PctRecOverlap=0.575;SizeDiff=0;StartDistance=51;EndDistance=51;GTMatch=0;TruScore=85;MatchId=2629.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:25:1|0:0:23:23:1:./.:0:0:0:0:0/1:32:13:./.:.:.:.:.:.
chr3	176506062	HG2_Ill_MetaSV_3403	GCTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCTCACGCCTGTAATTGCAGCACTTTGGAAGGCCGAGGCGGGCAGATCACGAAGTCAGGAGATAGCGACCACGGTGAAACCCCGTCTCTA	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2415:HG4_Ill_Krunchall_5745:HG4_PB_SVrefine2Falcon1Dovetail_2351:HG4_PB_assemblyticsfalcon_18134:HG2_PB_assemblyticsfalcon_18535:HG2_PB_SVrefine2Falcon1plusDovetail_8337:HG4_PB_pbsv_3871:HG2_PB_pbsv_3842:HG3_PB_pbsv_3768:HG2_PB_HySA_7345:HG4_Ill_scalpel_3732:HG4_Ill_manta_944:HG4_Ill_SVrefine2DISCOVARDovetail_3007:HG4_Ill_GATKHCSBGrefine_2715:HG3_PB_SVrefine2PBcRDovetail_1810:HG3_Ill_scalpel_3919:HG3_Ill_SVrefine2DISCOVARDovetail_3025:HG3_Ill_GATKHCSBGrefine_2622:HG2_PB_SVrefine2PBcRplusDovetail_7728:HG2_PB_SVrefine2PB10Xhap12_2835:HG2_PB_SVrefine2Falcon2Bionano_1823:HG2_Ill_scalpel_3804:HG2_Ill_SVrefine2DISCOVARplusDovetail_9036:HG2_Ill_MetaSV_3403:HG2_Ill_GATKHCSBGrefine_2615:HG2_10X_allpass_599:HG2_10X_SVrefine210Xhap12_2884:HG2_PB_assemblyticsPBcR_17936:HG4_Ill_Krunchall_5744:HG2_Ill_Krunchall_5528;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2884:HG2_10X_allpass_599:HG2_Ill_GATKHCSBGrefine_2615:HG2_Ill_MetaSV_3403:HG2_Ill_SVrefine2DISCOVARplusDovetail_9036:HG2_Ill_scalpel_3804:HG2_PB_SVrefine2Falcon2Bionano_1823:HG2_PB_SVrefine2PB10Xhap12_2835:HG2_PB_SVrefine2PBcRplusDovetail_7728:HG3_Ill_GATKHCSBGrefine_2622:HG3_Ill_SVrefine2DISCOVARDovetail_3025:HG3_Ill_scalpel_3919:HG3_PB_SVrefine2PBcRDovetail_1810:HG4_Ill_GATKHCSBGrefine_2715:HG4_Ill_SVrefine2DISCOVARDovetail_3007:HG4_Ill_manta_944:HG4_Ill_scalpel_3732;NumExactMatchSVs=17;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.342629;PBcalls=14;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-122;DistBack=8240;DistForward=-104;DistMin=-104;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=160;REFWIDENED=3:176505948-176506229;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2630.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:2:23:0:19:./.:0:0:0:0:1/1:0:60:./.:.:.:.:.:.
chr3	177381315	HG4_PB_pbsv_3880	CAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGGCAAAATCTCTCAGCATTTGCTTGTCTGTAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAGATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCTCCCACTCTCTTTTGGCTTGTAGAGTTTCTGCAGAGATATCAGCTGTTAGTCTGATGGGCTTCCCTTTGTGGGTAACCTGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCAAGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATTTGAATGTTGGTCTGCCTTGCTAGATTGGTGAAGTTCTCCTGGACAATATCCTGCAGAGTGTTTACCAACTTGGTTCCATTCTCCTCGTCACTTTCAGGTACACTAATCAGACGTAGATTTTGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTTTTCGTTTCTTTTTATTCTTTTTTTCTCTAAACTTCTCTGCTTGCTTCATTTCATTCATTTCATCTTCCATCACTGATAACCTTTCTTCCAGTTGATCGCATTGGCTACTGAGGCTTCTGCATTCGTCACATAGCTCTCGTGCCTTGGTTTTCAGCTCCATCAGGTCCTTTAAGGACTTCTCTGCATTGGTTATTCTAGTTATCCATTTGTCTAATTTTTTTTCAAAGCTTTTAACTTCTTTGCTATTGGTTCGAATTTCCTCCTGTAGCTAGGAGTAGTTTGATCGTCTGAAGCCTTCTTCTCTCAACTTGTCAAAGTCATTCTCCATCCAGCTTTGTTCCATTGCTGGTGAGGAGCTGCATTCCTTTGGAGGAGGAAAGGCACTCTGATTTTTAGAGTTTCCAGTTTTTCTGCTCTGGGTATCAGCAGCAGTGGCTGCAGAACAGTGGATATTGGTGAACCACAGATGCTGCTGCCTAATCGTTCCTCTGGAAGTTTTGTCTCAGAGGAGTACCTGGCCATGTGAGGTGTCAGTCCGCCCCCTACTGGGGGGTGCCTCCCAGTTAGGCTACTTGGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTGAAGCTGCGTGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGAGAGGGACATTTAAGTCTGCAGAGGTTATTGCTGTCTTTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTTGAGCTTCCCGGCCGCTTTGTTTACCTAATCAAACAACTAACTCGGCAATGGCAGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCGGACTGCTGTGCTAGCAATGAGTGAGACTCTGTGGGCGTAGGATCCTCCCAGCCAGGTGCGGGATATAATCCCCTGGTGTGCCGTTTTTTAAGCCAGTTGGAAAAGCGCAATATTAGGGTGGGAGTGAACCGATTCTAGGTGCTGTCTGTCACCGCTTTCTTTGACTAAGAAAGGGAATTCCCTGACCCCTTGCGCTTCCCAGGTGAGGTGATGCCTCGCCCTGCATCGGCTCATGCACGGTGAACTGCACCCACTGTCCTGCACCTACTGTCTGGCACTCCCCAGTGAGATGAACCTGGTAACTCAGTTGGAAATGCATAAATACCCGTCTTCTGCGTCACTCATGCTGGGAGCTGTAGATCGGAGCTGTTCCTATTCGGCCATCTTGTGCAACCCTCTTTTCTTATTCTTGAACTGTTGAATAAGCTACCAGCATTTTAAATAAGTTCAGGATTATGTTGCCAGGAAATAGTCTTTGATATCTGTGACAATTTTGTTGTTGCTGTTTGTTTTTTCTTTCTTTTTTTTTTTTTATGGGGAAAAGCATGAAGTTGTCTTTCTCATTGCCTTTCTCATCATGTTTTAAGTACAGAGTTCTTCTGAAGGGCACACTTTGTGGTTCTCATGGAATGTAAATAGCTCAAATGGCTCCACTTCCAAGAAACCTTCTTTAACCTTAAGGCTGAATGAAGTAAGCGCTTTCTCCTGTTCTCTAGTGTATTCCCAGCAAAACTTTGAGCATACTTTAAAAATGAATTTATTGCACATACTTCCATATCCAGGGAGAGCTCTGATTCCTCCTCTCATACACTCCAAGAGGAAGGGTCAAGGAAGTATTGAACTCAGGAACTTTTTTTAGGGTGGTGGTGTTGGTGAGAATCTCAATATGAAGAAGGAAGATTTCATGTACGTCCGTGTGAAGAGACCACCAAACAGGATTTGTGTGAGCAACATGGCTGTTTGTTTCACCTGGGTGCAGGCGGGCTGAGTCCGAAAAGAGAGTGAGCGAAGGGAGATGGGGTGGGGCCGTTTTATAAGATTTGGGCAGGTAAAGGAAAATTACAGTCAAAGGGGGTTTGTCCTCTGGCGGGCAGGAGTGGGGGTCGCAGGGTGCTCAGTGGGGGAGCTTTTTGAGCCAGGATGAGCCAGGAAAAGGACTTTCACAAGGTAATGTCATCACTTAAGGCAAGGACCGGCCATTTTCACTTCTTTTGTGGTGGAATGTCATCATTTAAGGTGGGGCAGGGCATTTTCACTTCTTTTGTGATTCTTCAGTTACTTCAGGCCATCTGGGCGTATACATGCAAGTCACAGGGGATGCAATGGCTTGGCTTGGGCTCAGAGGCCTGACATTCCTGCCTTCTTATATTAATAAGAAAAATAAAACAAAATAGTGTTGAAGTATTGGGGCGGTAAAAATTTTTGGGGGGTGGTATGGAGAGAGAGAATGGGCGATGTTTCTCAGGGCTGCTTTGAGCGGGATTAGGGGCGGCGTGGGAACCTGGGGTGGGAGAGATTAAGCTGAAGGAAGATTTTGTGGTAAGGGGTGATATTGTGGGGTTGTTAGAAGAAACATTTGTTGTGTAGAATGATTGGTGATGGCCTGGATACGGTTTTATATGAATTGAAAAACTAAATGGAATAAGAGAAAGAGAAAAACAGGTATAAAAGGTCTAAGAATTGGGAGGACCCAGGACATCTGATTGGAGAGTGCCTAAGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATTTATTTACCTCAAGAGTTTAGAGTGGCGGTTTGGGGATAGCACCAGGAGATATCAGCTGTGATGGCTTGGAGAAACAGTGTAAACTGGCAGTGTAAACAAGAGCAGGGCATGTATGAGTAGTTGAGAACGGTGAATAGGAGTATGACTAGACAGAAGATAGTAGGGATGACAAGTTTTTTGGGGCACAGTCTAAGTTGGTCTGGTGTCTGGAATGAGACTGGGGCCTAATAAAAAGGAGCGTCTATACAGGAGCTTAACTGGGCTGTACCTTGTAGCATTCCGAGGACAGGCCTGAATTCTGAGAAGCGAAAGTGGTTAAAGTATTGTCCAGTCCTTTTTAAGCTGGTGGCTGAGCTTGGTGAGGTGTGTTTTTAAAAGACCATTAGTCTGTTCTACTTTTCCTGAAGACTGAGGACTGTAAGGGATATAAAGGTTTCACTGAATACTAAGAGCCTGAAAAACTGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACTGTATAGAGGTGGGAAGGCTAAAATGAGGAATTATGTCTGACAGAAGGGAAGAAATGACTGTGGTGGCCTTCTCAGACCCTGTAGGAAAGGCCTCTACTTATCTAGTGAAAGTGTCTACTTAGACTAAGAGGTATTTTAGTTATCTGACTCGGGGCATGTTGAGTAAAGCTAATTTGCCAGTCCTGGATGGGGGCAAATCTTCAAGCTTGATGTGTAGGGAAGGGAGGGGGCCTGAATAATCCCTGAGGAGTAGTAGAATAGCAGATGGAACACTGAGAAGTTATTTCCTTGAGGATAGATTTCCATGATGGAAAGGCAATGAGAGGTTCTAAGAGGCGGGCTAGTGGCTTGTACTATAGCATAGCCTGCCTTTGCTGGTGTGTGGCGATTAGGCCTGGTGGAACTGCCATCAATAAATCAAGCGTGATCAGGGTG	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3406:HG4_10X_allpass_702:HG2_10X_allpass_600:HG2_PB_pbsv_3848:HG3_10X_allpass_753:HG3_Ill_Krunchall_5452:HG2_Ill_Krunchall_5538:HG2_Ill_tnscope_413:HG4_PB_pbsv_3880:HG4_PB_SVrefine2PBcRDovetail_2000:HG4_Ill_MetaSV_3546:HG3_PB_pbsv_3774:HG3_PB_SVrefine2PBcRDovetail_1812:HG3_Ill_MetaSV_3572:HG2_PB_SVrefine2PBcRplusDovetail_7732:HG2_PB_SVrefine2PB10Xhap12_2838:HG2_PB_SVrefine2Falcon1plusDovetail_8341;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_MetaSV_3406:HG4_PB_pbsv_3880:HG4_PB_SVrefine2PBcRDovetail_2000:HG4_Ill_MetaSV_3546:HG3_PB_pbsv_3774:HG3_PB_SVrefine2PBcRDovetail_1812:HG3_Ill_MetaSV_3572:HG2_PB_SVrefine2PBcRplusDovetail_7732:HG2_PB_SVrefine2PB10Xhap12_2838:HG2_PB_SVrefine2Falcon1plusDovetail_8341;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0164761;ClusterMaxSizeDiff=0.0164761;ClusterMaxEditDist=0.0164761;PBcalls=8;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-4098;DistBack=17941;DistForward=-4096;DistMin=-4096;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=3:177381316-177385417;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2631.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:19:0|1:29:0:2:12:./.:0:0:0:0:0/1:67:21:0/1:281:157:4239:.:.
chr3	177896496	HG2_PB_pbsv_3851	TTAACACATAACAGAAAAATAAATACTGCATGATCTCACTTGTAAGTGGGAGCTAAACA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_274:HG4_PB_pbsv_3883:HG4_PB_assemblyticsfalcon_18147:HG4_Ill_svaba_5030:HG4_Ill_scalpel_3744:HG4_Ill_manta_946:HG4_Ill_Krunchall_5762:HG4_Ill_GATKHC_6559:HG4_Ill_GATKHCSBGrefine_2723:HG4_Ill_250bpfermikitraw_5509:HG4_Ill_150bpfermikitraw_5240:HG4_CG_vcfBeta_2647:HG4_10X_allpass_703:HG2_PB_pbsv_3851:HG2_PB_assemblyticsfalcon_18548:HG2_PB_assemblyticsPBcR_17948:HG2_Ill_svaba_4914:HG2_Ill_manta_1092:HG2_Ill_SpiralSDKrefine_11669:HG2_Ill_Krunchall_5544:HG2_Ill_GATKHC_6450:HG2_Ill_GATKHCSBGrefine_2622:HG2_Ill_250bpfermikitraw_5437:HG2_Ill_150bpfermikitraw_5036:HG2_CG_vcfBeta_2342:HG2_10X_allpass_601:HG3_PB_assemblyticsfalcon_18451:HG4_Ill_Spiral_322;NumClusterSVs=28;ExactMatchIDs=HG2_10X_allpass_601:HG2_CG_vcfBeta_2342:HG2_Ill_150bpfermikitraw_5036:HG2_Ill_250bpfermikitraw_5437:HG2_Ill_GATKHCSBGrefine_2622:HG2_Ill_GATKHC_6450:HG2_Ill_Krunchall_5544:HG2_Ill_SpiralSDKrefine_11669:HG2_Ill_manta_1092:HG2_Ill_svaba_4914:HG2_PB_assemblyticsPBcR_17948:HG2_PB_assemblyticsfalcon_18548:HG2_PB_pbsv_3851:HG4_10X_allpass_703:HG4_CG_vcfBeta_2647:HG4_Ill_150bpfermikitraw_5240:HG4_Ill_250bpfermikitraw_5509:HG4_Ill_GATKHCSBGrefine_2723:HG4_Ill_GATKHC_6559:HG4_Ill_Krunchall_5762:HG4_Ill_manta_946:HG4_Ill_scalpel_3744:HG4_Ill_svaba_5030:HG4_PB_assemblyticsfalcon_18147:HG4_PB_pbsv_3883;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0168067;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.0169492;PBcalls=6;Illcalls=18;TenXcalls=2;CGcalls=2;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=2;HG2count=14;HG3count=1;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-58;DistBack=15321;DistForward=75596;DistMin=15321;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:177896495-177896556;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2632.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:0|1:30:1:3:29:./.:0:0:0:0:0/1:31:26:./.:.:.:.:.:.
chr3	178550130	HG2_PB_SVrefine2PB10Xhap12_2841	GGCCTATTTTAAAGATTATTTTATTGGTTTTTCTACAGTTTAACTATTATGTGCCAATACATGCAATTATTTTTATTTAGCCTACTTAGCATTAGCATTTCCAGGGCTTCTTTCCCTGCTCCTTAATATTCTTTGTCAATTTTAGAAAATTCTGTCATTATCTCATCAACATTGTCTGTAGTCATTCTCTGCCTCTTCACCTCTGGGACTCCAGTTGGCCACATACGAGGTTTTCTCATTGTATCCCCTACATGTCTTATGCTCCCTTTTGTTTTTCTCCCTCCTTTTGTCTCTCTTTACTTCTTTCTGGATACATTCCTATCTTCTAATTCAGCAATTCTTTCCTCTGCTCTGCAGATCAACTGTTAAACCCATCCATTGAGTCCTTAATTTCTCTTACTGTATTTTCAATTCTAGAATATCCAACTGAGTCTTGTTTTATCATTTCTAGTTCTCTGCAATATTTTAATTATTGTCTTTTAAATCTTTCAACATAAAAAGTAAAATTATAGTCATTATAAAGTCTATTTTGATATCTTCACTATTTGAAGCCCATATATACCTGTTCTGTTTTTGTTTTCTCTTGTTTGCTTTCATGTTGTCTTATAATATCTGGCTATGTTTTATTAGGTTTCTGATATTATATTTGCAAAATTTTTATAAAAAATAACTTCAATACTAGGATAATGTTACAATGTCATCTTTTCCAAAAATTATTTCCACTTACTTCTGCCAGGTACAA	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_414:HG2_10X_allpass_603:HG4_Ill_Krunchall_5770:HG3_Ill_Krunchall_5463:HG2_Ill_Krunchall_5553:HG3_PB_assemblyticsfalcon_18460:HG4_PB_assemblyticsfalcon_18151:HG2_PB_assemblyticsfalcon_18556:HG2_PB_assemblyticsPBcR_17954:HG4_PB_HySA_5832:HG4_PB_pbsv_3888:HG4_PB_SVrefine2PBcRDovetail_2002:HG4_PB_SVrefine2Falcon1Dovetail_2358:HG4_Ill_manta_948:HG4_Ill_SVrefine2DISCOVARDovetail_3014:HG4_Ill_MetaSV_3549:HG4_Ill_GATKHCSBGrefine_2725:HG4_10X_allpass_704:HG3_PB_pbsv_3783:HG3_PB_SVrefine2PBcRDovetail_1813:HG3_PB_SVrefine2Falcon1Dovetail_2425:HG3_Ill_manta_885:HG3_Ill_MetaSV_3574:HG3_10X_allpass_755:HG2_PB_pbsv_3858:HG2_PB_SVrefine2PBcRplusDovetail_7736:HG2_PB_SVrefine2PB10Xhap12_2841:HG2_PB_SVrefine2Falcon2Bionano_1827:HG2_PB_SVrefine2Falcon1plusDovetail_8347:HG2_Ill_manta_1098:HG2_Ill_SpiralSDKrefine_11677:HG2_Ill_MetaSV_3409:HG2_Ill_GATKHCSBGrefine_2624:HG2_10X_SVrefine210Xhap12_2893;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2893:HG2_Ill_GATKHCSBGrefine_2624:HG2_Ill_MetaSV_3409:HG2_Ill_SpiralSDKrefine_11677:HG2_Ill_manta_1098:HG2_PB_SVrefine2Falcon1plusDovetail_8347:HG2_PB_SVrefine2Falcon2Bionano_1827:HG2_PB_SVrefine2PB10Xhap12_2841:HG2_PB_SVrefine2PBcRplusDovetail_7736:HG2_PB_pbsv_3858:HG3_10X_allpass_755:HG3_Ill_MetaSV_3574:HG3_Ill_manta_885:HG3_PB_SVrefine2Falcon1Dovetail_2425:HG3_PB_SVrefine2PBcRDovetail_1813:HG3_PB_pbsv_3783:HG4_10X_allpass_704:HG4_Ill_GATKHCSBGrefine_2725:HG4_Ill_MetaSV_3549:HG4_Ill_SVrefine2DISCOVARDovetail_3014:HG4_Ill_manta_948:HG4_PB_SVrefine2Falcon1Dovetail_2358:HG4_PB_SVrefine2PBcRDovetail_2002:HG4_PB_pbsv_3888;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0108254;ClusterMaxSizeDiff=0.0108254;ClusterMaxEditDist=0.0108254;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-741;DistBack=9766;DistForward=-739;DistMin=-739;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:178550131-178550874;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2633.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:46:0|1:36:0:2:39:./.:0:0:0:0:0/1:46:13:0/1:53:11:.:.:.
chr3	178839230	HG3_PB_SVrefine2Falcon1Dovetail_2427	GCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCCCGTCCGGGTGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGC	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1828:HG3_PB_assemblyticsfalcon_18462:HG3_PB_SVrefine2Falcon1Dovetail_2427:HG2_PB_pbsv_3861:HG3_PB_pbsv_3785;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2427:HG3_PB_assemblyticsfalcon_18462;NumExactMatchSVs=2;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.0181818;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-111;DistBack=680;DistForward=-62;DistMin=-62;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=358;REFWIDENED=3:178838875-178839343;PctSeqSimilarity=0.9852;PctSizeSimilarity=0.991;PctRecOverlap=0.4018;SizeDiff=1;StartDistance=66;EndDistance=67;GTMatch=0;TruScore=79;MatchId=2635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:28:./.:20:7:5:15:./.:0:0:0:0:0/0:22:2:./.:.:.:.:.:.
chr3	179445674	HG2_PB_SVrefine2Falcon2Bionano_1829	CCCTCACCTCCCGGACGGGGCGGCTGGCCAGGTGGGGGGCTGACCCCCCCACCTCCCTCTCGGACGAGGCGGCTGGCTGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCAGGTGGGGGGCTGATCCCCACCA	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1829:HG4_PB_assemblyticsfalcon_18154:HG4_PB_SVrefine2PBcRDovetail_2005:HG4_PB_SVrefine2Falcon1Dovetail_2360:HG3_PB_SVrefine2PBcRDovetail_1814:HG2_PB_SVrefine2PB10Xhap12_2845:HG2_PB_PB10Xdip_20215:HG4_PB_pbsv_3892:HG2_PB_pbsv_3862:HG3_PB_pbsv_3787:HG3_PB_SVrefine2Falcon1Dovetail_2428;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1829:HG3_PB_SVrefine2Falcon1Dovetail_2428;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0134228;ClusterMaxSizeDiff=0.0134228;ClusterMaxEditDist=0.0604027;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-149;DistBack=-182;DistForward=-121;DistMin=-182;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=543;REFWIDENED=3:179445675-179446366;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9933;PctRecOverlap=0.9667;SizeDiff=1;StartDistance=-5;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=2636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:0|1:25:3:1:32:./.:0:0:0:0:0/0:25:2:./.:.:.:.:.:.
chr3	179618975	HG4_Ill_svaba_5046	TAAAACATTGTAAGATATATATGTAATTGTTCAGACTTCAGACTCAATTTTCA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_275:HG3_PB_pbsv_3788:HG4_PB_pbsv_3893:HG2_PB_pbsv_3863:HG3_PB_HySA_6052:HG4_PB_HySA_5837:HG2_PB_HySA_7377:HG4_PB_SVrefine2PBcRDovetail_2006:HG4_PB_SVrefine2Falcon1Dovetail_2361:HG4_Ill_svaba_5046:HG4_Ill_SVrefine2DISCOVARDovetail_3019:HG4_Ill_GATKHCSBGrefine_2730:HG4_Ill_250bpfermikitraw_5521:HG4_Ill_150bpfermikitraw_5251:HG3_PB_SVrefine2PBcRDovetail_1815:HG3_PB_SVrefine2Falcon1Dovetail_2429:HG3_Ill_svaba_5021:HG3_Ill_GATKHCSBGrefine_2627:HG3_Ill_250bpfermikitraw_5287:HG2_PB_SVrefine2PBcRplusDovetail_7738:HG2_PB_SVrefine2PB10Xhap12_2846:HG2_PB_SVrefine2Falcon2Bionano_1830:HG2_PB_SVrefine2Falcon1plusDovetail_8348:HG2_Ill_svaba_4931:HG2_Ill_SpiralSDKrefine_11682:HG2_Ill_GATKHCSBGrefine_2626:HG2_Ill_250bpfermikitraw_5446:HG4_Ill_Spiral_324;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5446:HG2_Ill_GATKHCSBGrefine_2626:HG2_Ill_SpiralSDKrefine_11682:HG2_Ill_svaba_4931:HG2_PB_SVrefine2Falcon1plusDovetail_8348:HG2_PB_SVrefine2Falcon2Bionano_1830:HG2_PB_SVrefine2PB10Xhap12_2846:HG2_PB_SVrefine2PBcRplusDovetail_7738:HG3_Ill_250bpfermikitraw_5287:HG3_Ill_GATKHCSBGrefine_2627:HG3_Ill_svaba_5021:HG3_PB_SVrefine2Falcon1Dovetail_2429:HG3_PB_SVrefine2PBcRDovetail_1815:HG4_Ill_150bpfermikitraw_5251:HG4_Ill_250bpfermikitraw_5521:HG4_Ill_GATKHCSBGrefine_2730:HG4_Ill_SVrefine2DISCOVARDovetail_3019:HG4_Ill_svaba_5046:HG4_PB_SVrefine2Falcon1Dovetail_2361:HG4_PB_SVrefine2PBcRDovetail_2006;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0384615;PBcalls=14;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=53485;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=107;REFWIDENED=3:179618976-179619134;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2637.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:58:0|1:29:7:4:48:./.:0:0:0:0:0/1:28:21:./.:.:.:.:.:.
chr3	180173589	HG4_Ill_GATKHCSBGrefine_2734	ACACTATTTCTTGATTTATTGACATGGAAACTGCTGGGTGTGATCTTGGGCAAATTATTTGCCTTTCTCAGTCTCTCTAAAATGAGCATGATAATAATACCTATCTCACTGAAGAGTCAATGAAATAATTCACATATTTATCACAGTGCCTAAATTACAGTAAGTGCTCTATAAATGTTAGCATTTATTGAATAACTTATCCCGTTCATACAGCTAGTAAGTGCTAGAACCAGGGATCAAAGCTAGGCAGT	A	20	PASS	ClusterIDs=HG2_Ill_Cortex_5931:HG4_PB_pbsv_3896:HG4_Ill_Krunchall_5775:HG3_Ill_Krunchall_5468:HG2_Ill_Krunchall_5557:HG2_PB_assemblyticsfalcon_18562:HG2_PB_assemblyticsPBcR_17960:HG3_PB_assemblyticsfalcon_18466:HG4_Ill_MetaSV_3554:HG2_PB_HySA_7380:HG2_Ill_MetaSV_3410:HG4_PB_SVrefine2Falcon1Dovetail_2363:HG4_Ill_svaba_5048:HG4_Ill_manta_952:HG4_Ill_GATKHCSBGrefine_2734:HG4_10X_allpass_706:HG3_PB_pbsv_3789:HG3_PB_SVrefine2PBcRDovetail_1816:HG3_PB_SVrefine2Falcon1Dovetail_2430:HG3_Ill_svaba_5023:HG3_Ill_manta_887:HG3_Ill_SVrefine2DISCOVARDovetail_3038:HG3_Ill_MetaSV_3576:HG3_Ill_GATKHCSBGrefine_2628:HG2_PB_SVrefine2PBcRplusDovetail_7739:HG2_PB_SVrefine2PB10Xhap12_2847:HG2_PB_SVrefine2Falcon2Bionano_1831:HG2_PB_SVrefine2Falcon1plusDovetail_8349:HG2_Ill_svaba_4932:HG2_Ill_scalpel_3821:HG2_Ill_manta_1099:HG2_Ill_SpiralSDKrefine_11684:HG2_Ill_SVrefine2DISCOVARplusDovetail_9050:HG2_Ill_GATKHCSBGrefine_2627:HG2_10X_allpass_604:HG2_10X_SVrefine210Xhap12_2895:HG2_PB_pbsv_3864:HG4_Ill_Cortex_2520:HG3_Ill_Cortex_2528;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2895:HG2_10X_allpass_604:HG2_Ill_GATKHCSBGrefine_2627:HG2_Ill_SVrefine2DISCOVARplusDovetail_9050:HG2_Ill_SpiralSDKrefine_11684:HG2_Ill_manta_1099:HG2_Ill_scalpel_3821:HG2_Ill_svaba_4932:HG2_PB_SVrefine2Falcon1plusDovetail_8349:HG2_PB_SVrefine2Falcon2Bionano_1831:HG2_PB_SVrefine2PB10Xhap12_2847:HG2_PB_SVrefine2PBcRplusDovetail_7739:HG3_Ill_GATKHCSBGrefine_2628:HG3_Ill_MetaSV_3576:HG3_Ill_SVrefine2DISCOVARDovetail_3038:HG3_Ill_manta_887:HG3_Ill_svaba_5023:HG3_PB_SVrefine2Falcon1Dovetail_2430:HG3_PB_SVrefine2PBcRDovetail_1816:HG3_PB_pbsv_3789:HG4_10X_allpass_706:HG4_Ill_GATKHCSBGrefine_2734:HG4_Ill_manta_952:HG4_Ill_svaba_5048:HG4_PB_SVrefine2Falcon1Dovetail_2363;NumExactMatchSVs=25;ClusterMaxShiftDist=0.011976;ClusterMaxSizeDiff=0.011976;ClusterMaxEditDist=0.028;PBcalls=14;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-250;DistBack=19866;DistForward=-247;DistMin=-247;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=3:180173590-180173841;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2638.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:64:1/1:2:26:0:19:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr3	181006187	HG2_Ill_250bpfermikitraw_5452	ATAAAGGGATGCATCTTCTTGTGTATGCTGGGAGCTGGCAACCTGGCAGGAGTCGTTCTAAATTGTCATTCC	A	20	PASS	ClusterIDs=HG4_Ill_Spiral_325:HG4_PB_HySA_5842:HG3_PB_HySA_6056:HG3_Ill_Spiral_4285:HG2_PB_HySA_7384:HG2_Ill_Spiral_276:HG4_PB_pbsv_3901:HG2_PB_pbsv_3868:HG3_PB_pbsv_3791:HG4_PB_SVrefine2PBcRDovetail_2011:HG4_PB_SVrefine2Falcon1Dovetail_2367:HG4_Ill_svaba_5051:HG4_Ill_scalpel_3753:HG4_Ill_SVrefine2DISCOVARDovetail_3023:HG4_Ill_Krunchall_5778:HG4_Ill_GATKHCSBGrefine_2737:HG4_Ill_250bpfermikitraw_5525:HG4_Ill_150bpfermikitraw_5256:HG3_PB_SVrefine2PBcRDovetail_1818:HG3_PB_SVrefine2Falcon1Dovetail_2434:HG3_Ill_svaba_5025:HG3_Ill_scalpel_3936:HG3_Ill_manta_888:HG3_Ill_SVrefine2DISCOVARDovetail_3043:HG3_Ill_Krunchall_5470:HG3_Ill_GATKHCSBGrefine_2629:HG3_Ill_250bpfermikitraw_5293:HG3_Ill_150bpfermikitraw_5132:HG2_PB_SVrefine2PBcRplusDovetail_7741:HG2_PB_SVrefine2Falcon2Bionano_1833:HG2_PB_SVrefine2Falcon1plusDovetail_8352:HG2_Ill_svaba_4935:HG2_Ill_scalpel_3822:HG2_Ill_manta_1100:HG2_Ill_SpiralSDKrefine_11689:HG2_Ill_SVrefine2DISCOVARplusDovetail_9055:HG2_Ill_GATKHCSBGrefine_2630:HG2_Ill_250bpfermikitraw_5452:HG2_Ill_150bpfermikitraw_5050:HG2_10X_SVrefine210Xhap12_2900;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2900:HG2_Ill_150bpfermikitraw_5050:HG2_Ill_250bpfermikitraw_5452:HG2_Ill_GATKHCSBGrefine_2630:HG2_Ill_SVrefine2DISCOVARplusDovetail_9055:HG2_Ill_SpiralSDKrefine_11689:HG2_Ill_manta_1100:HG2_Ill_scalpel_3822:HG2_Ill_svaba_4935:HG2_PB_SVrefine2Falcon1plusDovetail_8352:HG2_PB_SVrefine2Falcon2Bionano_1833:HG2_PB_SVrefine2PBcRplusDovetail_7741:HG3_Ill_150bpfermikitraw_5132:HG3_Ill_250bpfermikitraw_5293:HG3_Ill_GATKHCSBGrefine_2629:HG3_Ill_Krunchall_5470:HG3_Ill_SVrefine2DISCOVARDovetail_3043:HG3_Ill_manta_888:HG3_Ill_scalpel_3936:HG3_Ill_svaba_5025:HG3_PB_SVrefine2Falcon1Dovetail_2434:HG3_PB_SVrefine2PBcRDovetail_1818:HG4_Ill_150bpfermikitraw_5256:HG4_Ill_250bpfermikitraw_5525:HG4_Ill_GATKHCSBGrefine_2737:HG4_Ill_Krunchall_5778:HG4_Ill_SVrefine2DISCOVARDovetail_3023:HG4_Ill_scalpel_3753:HG4_Ill_svaba_5051:HG4_PB_SVrefine2Falcon1Dovetail_2367:HG4_PB_SVrefine2PBcRDovetail_2011;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0277778;ClusterMaxSizeDiff=0.0277778;ClusterMaxEditDist=0.028169;PBcalls=13;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-71;DistBack=43997;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=71;REFWIDENED=3:181006188-181006329;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:55:1/1:0:19:1:18:./.:0:0:0:0:1/1:0:40:./.:.:.:.:.:.
chr3	184085723	HG2_Ill_scalpel_3845	TCTGTGCATTGATGTTTGTCAGAATTTTGGTTCCTAGTGACAAAACAGTAGGAAGATGCCTCTTCTGTTTCTTAGGCTGAGATGGAACAGTGCCTTGCACATAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2917:HG2_Ill_Krunchall_5583:HG4_PB_pbsv_3920:HG4_PB_HySA_5886:HG4_Ill_svaba_5073:HG4_Ill_scalpel_3777:HG4_Ill_manta_955:HG4_Ill_MetaSV_3561:HG4_Ill_GATKHC_6610:HG4_Ill_GATKHCSBGrefine_2753:HG4_Ill_Cortex_2522:HG4_Ill_250bpfermikitraw_5549:HG4_Ill_150bpfermikitraw_5283:HG2_Ill_svaba_4958:HG2_Ill_scalpel_3845:HG2_Ill_SpiralSDKrefine_11706:HG2_Ill_GATKHC_6501:HG2_Ill_GATKHCSBGrefine_2639:HG2_Ill_Cortex_5936:HG2_10X_allpass_606:HG2_PB_pbsv_3886:HG4_PB_SVrefine2PBcRDovetail_2023:HG4_Ill_SVrefine2DISCOVARDovetail_3045:HG2_PB_SVrefine2PBcRplusDovetail_7755:HG2_PB_SVrefine2PB10Xhap12_2867:HG2_PB_SVrefine2Falcon1plusDovetail_8364;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_606:HG2_Ill_Cortex_5936:HG2_Ill_GATKHCSBGrefine_2639:HG2_Ill_GATKHC_6501:HG2_Ill_SpiralSDKrefine_11706:HG2_Ill_scalpel_3845:HG2_Ill_svaba_4958:HG4_Ill_150bpfermikitraw_5283:HG4_Ill_250bpfermikitraw_5549:HG4_Ill_Cortex_2522:HG4_Ill_GATKHCSBGrefine_2753:HG4_Ill_GATKHC_6610:HG4_Ill_MetaSV_3561:HG4_Ill_manta_955:HG4_Ill_scalpel_3777:HG4_Ill_svaba_5073;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0192308;ClusterMaxSizeDiff=0.0192308;ClusterMaxEditDist=0.0485437;PBcalls=7;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-103;DistBack=35181;DistForward=-22;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=102;REFWIDENED=3:184085704-184085908;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:24:0|1:19:3:0:18:./.:0:0:0:0:0/1:35:14:./.:.:.:.:.:.
chr3	184125372	HG2_Ill_GATKHCSBGrefine_2640	AGGCTGGAACCAGGAGTCAGGAAGCTGTCTCTGAACAGGACTGAGGACAATGGATTTGTTGACCGCTCCTCATGTTTTCCCCACTCTGTCCCGCTTTGGGGATTCCTCTCCCAGTCCACGTGGCCCTGGGGACTGTCAATCACAGAGTTTCCACCCCCCCCAACCTGCAGATTCTCACAGACATCGGGGTGTTCTTT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_518:HG3_PB_pbsv_3809:HG2_PB_pbsv_3887:HG4_Ill_Krunchall_5804:HG3_Ill_Krunchall_5491:HG2_Ill_Krunchall_5584:HG3_PB_HySA_6087:HG3_Ill_MetaSV_3581:HG2_PB_HySA_7432:HG2_Ill_MetaSV_3419:HG4_PB_SVrefine2PBcRDovetail_2024:HG4_PB_SVrefine2Falcon1Dovetail_2384:HG4_Ill_svaba_5074:HG4_Ill_manta_956:HG4_Ill_SVrefine2DISCOVARDovetail_3046:HG4_Ill_MetaSV_3562:HG4_Ill_GATKHCSBGrefine_2754:HG4_Ill_Cortex_2523:HG4_10X_allpass_708:HG3_PB_SVrefine2PBcRDovetail_1831:HG3_PB_SVrefine2Falcon1Dovetail_2449:HG3_Ill_svaba_5050:HG3_Ill_scalpel_3952:HG3_Ill_SVrefine2DISCOVARDovetail_3059:HG3_Ill_GATKHCSBGrefine_2643:HG3_Ill_Cortex_2530:HG3_Ill_250bpfermikitraw_5311:HG3_Ill_150bpfermikitraw_5155:HG3_10X_allpass_758:HG2_PB_SVrefine2PBcRplusDovetail_7756:HG2_PB_SVrefine2PB10Xhap12_2868:HG2_PB_SVrefine2Falcon2Bionano_1845:HG2_PB_SVrefine2Falcon1plusDovetail_8365:HG2_Ill_svaba_4959:HG2_Ill_scalpel_3846:HG2_Ill_manta_1102:HG2_Ill_SpiralSDKrefine_11707:HG2_Ill_SVrefine2DISCOVARplusDovetail_9074:HG2_Ill_GATKHCSBGrefine_2640:HG2_Ill_Cortex_5937:HG2_10X_allpass_607:HG2_10X_SVrefine210Xhap12_2918:HG4_PB_pbsv_3921;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2918:HG2_10X_allpass_607:HG2_Ill_Cortex_5937:HG2_Ill_GATKHCSBGrefine_2640:HG2_Ill_SVrefine2DISCOVARplusDovetail_9074:HG2_Ill_SpiralSDKrefine_11707:HG2_Ill_manta_1102:HG2_Ill_scalpel_3846:HG2_Ill_svaba_4959:HG2_PB_SVrefine2Falcon1plusDovetail_8365:HG2_PB_SVrefine2Falcon2Bionano_1845:HG2_PB_SVrefine2PB10Xhap12_2868:HG2_PB_SVrefine2PBcRplusDovetail_7756:HG3_10X_allpass_758:HG3_Ill_150bpfermikitraw_5155:HG3_Ill_250bpfermikitraw_5311:HG3_Ill_Cortex_2530:HG3_Ill_GATKHCSBGrefine_2643:HG3_Ill_SVrefine2DISCOVARDovetail_3059:HG3_Ill_scalpel_3952:HG3_Ill_svaba_5050:HG3_PB_SVrefine2Falcon1Dovetail_2449:HG3_PB_SVrefine2PBcRDovetail_1831:HG4_10X_allpass_708:HG4_Ill_Cortex_2523:HG4_Ill_GATKHCSBGrefine_2754:HG4_Ill_MetaSV_3562:HG4_Ill_SVrefine2DISCOVARDovetail_3046:HG4_Ill_manta_956:HG4_Ill_svaba_5074:HG4_PB_SVrefine2Falcon1Dovetail_2384:HG4_PB_SVrefine2PBcRDovetail_2024;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0101523;ClusterMaxSizeDiff=0.0101523;ClusterMaxEditDist=0.0102041;PBcalls=13;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=20;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-196;DistBack=15787;DistForward=-195;DistMin=-195;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:184125373-184125571;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2642.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:2:23:0:16:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr3	184470777	HG2_10X_SVrefine210Xhap12_2923	AGGAGAAGGTGGTGAGAGAAGAAGGTGGTGGGAGAAGAAGGTGATGGGAGAAGAAGGTGTTGGGAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTAGGAGAAGAAGGTGATGGGAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTAGGAGAAGAAGGTGATGGGAGAAGGTGATGGGAGAAGAAGGTGGTGGGAGAAGAAGGTGGTGGGAGAAGAAGGTGGTGGGAGAAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTAGGAGAAGGTGGTGGCAGAAGGTGGTGGCAGAAGGTGGTGGGAGAAGAAAGTGATGGGAGAAGGTGGTGGGAGAAGAAGGTGATGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGAAGGTGATGGGAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGAAGGTGATGGGAGAAGGAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTAGGAGAAGAAGGTGATGGGAGAAGGTGATGGGAGAAGAAGGTGTGGTGGGAGAAGAAGGTGGTGGGAGAAGAAGGTGGTGGGAGAAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGAAGGTGATGGGAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGAAAGTGATGGGAGAAGGTGGTGGGAGAAGAAGGTGATGGGAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGAAGGTGATGGGAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGAAAGTGATGGGAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGAAGGTGATGGGAGAAGAAGATGGTGGGAGAAGAAGGTGGTGGGAGAAGGTGGTAGGAGAAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGATGGGAGAAGGTGGTGGAAGAAGAAGGTGGTGGGAGAAGGAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGAAGGTGATGGGAGAAGAAGATGGTGGGAGAAGAAGGTGGTGGGAGAAGGTGGTAGGAGAAGAAGGTGGTGGGAGAAGGTGGTGGGAGAAGGTGATGGGAGAAGGTGGTGGGAGAAGAAGGTGTTGGGAGAAGGTGGTG	A	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2027:HG4_Ill_MetaSV_3563:HG2_PB_pbsv_3893:HG4_PB_pbsv_3926:HG2_PB_SVrefine2Falcon2Bionano_1849:HG2_10X_SVrefine210Xhap12_2923:HG2_PB_SVrefine2PB10Xhap12_2873:HG2_PB_SVrefine2Falcon1plusDovetail_8371;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2923:HG2_PB_SVrefine2Falcon2Bionano_1849:HG4_PB_pbsv_3926;NumExactMatchSVs=3;ClusterMaxShiftDist=0.190308;ClusterMaxSizeDiff=0.190308;ClusterMaxEditDist=0.190308;PBcalls=6;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-1547;DistBack=9;DistForward=-1514;DistMin=-1514;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=378;REFWIDENED=3:184470778-184472702;PctSeqSimilarity=0.9211;PctSizeSimilarity=0.991;PctRecOverlap=0.9664;SizeDiff=14;StartDistance=-52;EndDistance=-38;GTMatch=0;TruScore=95;MatchId=2643.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:21:./.:14:4:6:11:./.:0:0:0:0:./.:2:3:0/1:37:51:1443:.:.
chr3	184952277	HG2_Ill_SpiralSDKrefine_11714	CAGGAGTTCCCCTGTAGCTGATGGATCAGAGAGAGGCCCTAGGGCTAAGGTTAAGGGAAACAAGATCATAGAGAGGCCCTAGGGCTAAGGTTAAGGGAAACA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2927:HG4_PB_pbsv_3929:HG3_PB_pbsv_3817:HG2_PB_pbsv_3897:HG4_PB_SVrefine2PBcRDovetail_2031:HG4_PB_SVrefine2Falcon1Dovetail_2394:HG4_Ill_SVrefine2DISCOVARDovetail_3052:HG4_Ill_GATKHCSBGrefine_2756:HG4_Ill_250bpfermikitraw_5559:HG4_Ill_150bpfermikitraw_5293:HG3_PB_SVrefine2PBcRDovetail_1841:HG3_PB_SVrefine2Falcon1Dovetail_2460:HG3_Ill_SVrefine2DISCOVARDovetail_3067:HG3_Ill_GATKHCSBGrefine_2648:HG3_Ill_250bpfermikitraw_5322:HG3_Ill_150bpfermikitraw_5165:HG3_10X_allpass_760:HG2_PB_SVrefine2PBcRplusDovetail_7764:HG2_PB_SVrefine2PB10Xhap12_2877:HG2_PB_SVrefine2Falcon2Bionano_1853:HG2_PB_SVrefine2Falcon1plusDovetail_8375:HG2_Ill_SpiralSDKrefine_11714:HG2_Ill_SVrefine2DISCOVARplusDovetail_9083:HG2_Ill_GATKHCSBGrefine_2644:HG2_Ill_250bpfermikitraw_5485;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2927:HG4_PB_SVrefine2PBcRDovetail_2031:HG4_PB_SVrefine2Falcon1Dovetail_2394:HG4_Ill_SVrefine2DISCOVARDovetail_3052:HG4_Ill_GATKHCSBGrefine_2756:HG4_Ill_250bpfermikitraw_5559:HG4_Ill_150bpfermikitraw_5293:HG3_PB_SVrefine2PBcRDovetail_1841:HG3_PB_SVrefine2Falcon1Dovetail_2460:HG3_Ill_SVrefine2DISCOVARDovetail_3067:HG3_Ill_GATKHCSBGrefine_2648:HG3_Ill_250bpfermikitraw_5322:HG3_Ill_150bpfermikitraw_5165:HG3_10X_allpass_760:HG2_PB_SVrefine2PBcRplusDovetail_7764:HG2_PB_SVrefine2PB10Xhap12_2877:HG2_PB_SVrefine2Falcon2Bionano_1853:HG2_PB_SVrefine2Falcon1plusDovetail_8375:HG2_Ill_SpiralSDKrefine_11714:HG2_Ill_SVrefine2DISCOVARplusDovetail_9083:HG2_Ill_GATKHCSBGrefine_2644:HG2_Ill_250bpfermikitraw_5485;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00990099;ClusterMaxSizeDiff=0.00985222;ClusterMaxEditDist=0.019802;PBcalls=11;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-101;DistBack=2814;DistForward=64948;DistMin=2814;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=164;REFWIDENED=3:184952278-184952542;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2644.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:1/1:2:20:1:24:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr3	185017328	HG2_10X_allpass_609	TCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_279:HG2_PB_HySA_7450:HG3_PB_assemblyticsfalcon_18515:HG3_Ill_Krunchall_5503:HG4_PB_pbsv_3930:HG4_PB_assemblyticsfalcon_18207:HG2_PB_assemblyticsfalcon_18609:HG2_PB_HySA_7449:HG2_Ill_breakscan11_519:HG3_PB_HySA_6101:HG2_PB_pbsv_3898:HG4_PB_SVrefine2PBcRDovetail_2032:HG3_PB_pbsv_3818:HG4_Ill_MetaSV_3565:HG2_Ill_MetaSV_3421:HG4_PB_HySA_5901:HG4_Ill_scalpel_3784:HG4_Ill_GATKHCSBGrefine_2757:HG4_10X_allpass_709:HG3_PB_SVrefine2PBcRDovetail_1842:HG3_PB_SVrefine2Falcon1Dovetail_2461:HG3_Ill_scalpel_3962:HG3_Ill_manta_893:HG3_Ill_SVrefine2DISCOVARDovetail_3068:HG3_Ill_GATKHCSBGrefine_2649:HG3_10X_allpass_761:HG2_Ill_scalpel_3856:HG2_Ill_manta_1104:HG2_Ill_GATKHCSBGrefine_2645:HG2_10X_allpass_609:HG2_10X_SVrefine210Xhap12_2928:HG4_PB_SVrefine2Falcon1Dovetail_2395;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2928:HG2_10X_allpass_609:HG2_Ill_GATKHCSBGrefine_2645:HG2_Ill_manta_1104:HG2_Ill_scalpel_3856:HG3_10X_allpass_761:HG3_Ill_GATKHCSBGrefine_2649:HG3_Ill_SVrefine2DISCOVARDovetail_3068:HG3_Ill_manta_893:HG3_Ill_scalpel_3962:HG3_PB_SVrefine2Falcon1Dovetail_2461:HG3_PB_SVrefine2PBcRDovetail_1842:HG4_10X_allpass_709:HG4_Ill_GATKHCSBGrefine_2757:HG4_Ill_scalpel_3784:HG4_PB_HySA_5901;NumExactMatchSVs=16;ClusterMaxShiftDist=0.103611;ClusterMaxSizeDiff=0.103611;ClusterMaxEditDist=0.103611;PBcalls=14;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-481;DistForward=8143;DistMin=-481;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=3:185017329-185017669;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2645.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:20:0|1:15:0:0:16:./.:0:0:0:0:0/1:26:26:0/1:25:13:.:.:.
chr3	186581015	HG3_PB_SVrefine2PBcRDovetail_1847	TGAAAAATATTGCAAATAGTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCGTCTCCCTCTGATGCCGAGCCAAAGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCTGCCACGCCTGACTGGTTTTCGGTTTTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGCTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGAAGTCTCGTTCACTCAGTGCTCAGTGGTGTCCAGGCTGGAGTGCAGCGGCGTGATCTCGGCTCGCTACAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGAGCCGAGAGTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATATGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGGAGCGCCTCTTCCCGGCTGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCACCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAACCCTGTCTGGGAGGTGAGGAGCGTCTCTGCCCCGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGAGAGGCGGGGGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTTCCGGCCGGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCTGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGACAGCCCCCCGCCCGGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTAGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATGGAAGTGGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAGAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAGCATGTGCTGTGTCCACTCAGGGTTAAGTGGATTGGGGGCGGTGCAGGATGTGCTTTGTTAAACAGATGCTTTGTTAAACAGATGCAGCGTGCTGGTTGAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAGACACTGCGGAGGGCCGCGGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGCCCAGGGGACAGGCATTCAGCATATGGAGGATCCACGCCAGCCCCGGCTGCTGCGTTCCCTTAGTATTTATTGCTCATTATCGGGCGTGACAGGATAATAGGATAATGGTGGGGAGGTCGGAAGGTAAACACGTGAACAAATGTCTCTGCACCATAAACAAGGTAAAGAAAAAAGTGCTGTGCTTTTGATGTGCATATACATAAACATCTCATTGCCTTAAGGAACAGTATTGCTGCCAGCATGTCCCACCTCCAGCCCTAAGGCGGTTTTCTCCTATCTCAGTAGATGGAATATACAATCAGCTTTACACCCAGACATTCCATTGCCCAGGGATGAGCAGGAGACAGAAGCCTTCCTCTTATCTCAACTGCAAAAAGGCGTTCCTTCCTCTTTTACTAATCCTCCTCAGCACAGACCTTTTACGGGTGTCGGGTGTCGGGCTGGGGGACGGTCAGGTCTTTCCCTTCCCACAAGGCCATATTTCAGACTCTCACATGGGGAGAAACCTTGGACGGTGCCTGGCTTTCCTGGGCAGAGGTCCCTGCGGCCTTCTGCAGTGTTTTGTGTCTCTGGGTACTTGAGATTGGGGAGTGGTTTGAGATTGGGGAGTGGTGATGACTCTTAACAAGCATGCTGCCTTCAAGCATTTGTTTAACAAAGCACACCCTGCACAGCCCTTGATCCATTTGGCCCTGAGTTGACACAGCGCATGTTTCGGGGAGCACAGGGTTGGGGGAAGGGTTACAGATTGGCAGCATCTCGGGGCAGAAGAATTTTTCTTAGTGGGGAGCAGAGTGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAGTCTGATCTCTCTTTCTTTTCCCCACAATGTGGTTTTGGGCGCCTGTAGTCCCGGCTACTTGGGAGACTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCTGTGAGCCGAGATTGTGCCACTGCACTACAGCCTGGGCGAAAAAAGCAAAACTCCGTCTCAAAAAAAAAAACAAAACACTTGTGATTTGGGGGTTTTGTGGAAATTTAATTACGATGAAAAATCTGTATCTTTTTTGTAATGTTGGCATACTTGGGTAATTTTGTGGCAAATATATTTCCCAGTGGACCTTTTGTTGGTGGCACTAACTGCAAGGTTGCTGGGAAAGTGGAGTCTGTTTGGTGGATGAGCTCTGACTGCCGTTTTGGAACCTCACCTCTACTCATGCTGTCTCAAGTCCTTGTCTCATTCTCCAGCTCTCAGTTCAAATAAAGTTATTTCTCCTGGGAAAAAAAGTTCCGTGAAACGCACACTGGATGACAGTGCTGAAGTTGGGTGCCCTGGGAAGTCCTCAGGACACCCCTGCATGAAGGCTGCCCCAGGAGAGCAGCGCAAGGTTGTGGAGGTCTCAAAGCTCTGAAGAACCTGCCTACCGAAGACAGGAGTGCCCACAAAACAGTTGGCCCATGGGCTCCCCAAGACCTACGTGTACCTCGGAGGCATTTGGCAGAAGATTCTTTGTGAACAAAAATCTCTGCCCACTAGGAGGCAGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAAACCAGAACTCCACCTTATGTGTTCATTGTGGAATTTGAAAATGGAAGCCTAAAGTTGAAAATTAAAATCACCCGTGATAGCTGTAAAAAAAAAAAAAAAAAAAAATCGTAAATGAGTTCTTACTTTGGAAGCATATATACTAAAGTTGGAATGAAACAGAGAAGATTAGTTACTGATTTCATTTTTCAATAAGTTTAGATTTATTATGTTGGTTTCCCAATTTAAAAAATTGACTTCTTAAAAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_520:HG3_Ill_Krunchall_5527:HG2_Ill_Krunchall_5617:HG3_10X_allpass_762:HG4_10X_allpass_710:HG2_10X_allpass_610:HG4_Ill_Krunchall_5834:HG4_PB_assemblyticsfalcon_18222:HG3_PB_assemblyticsfalcon_18532:HG2_PB_assemblyticsfalcon_18626:HG2_PB_assemblyticsPBcR_18025:HG2_Ill_tnscope_415:HG4_PB_pbsv_3942:HG4_PB_SVrefine2PBcRDovetail_2037:HG4_PB_SVrefine2Falcon1Dovetail_2401:HG4_Ill_SVrefine2DISCOVARDovetail_3062:HG4_Ill_MetaSV_3570:HG4_Ill_GATKHCSBGrefine_2768:HG3_PB_pbsv_3829:HG3_PB_SVrefine2PBcRDovetail_1847:HG3_PB_SVrefine2Falcon1Dovetail_2464:HG3_Ill_SVrefine2DISCOVARDovetail_3076:HG3_Ill_MetaSV_3587:HG3_Ill_GATKHCSBGrefine_2661:HG2_PB_pbsv_3911:HG2_PB_SVrefine2PBcRplusDovetail_7770:HG2_PB_SVrefine2PB10Xhap12_2883:HG2_PB_SVrefine2Falcon2Bionano_1859:HG2_PB_SVrefine2Falcon1plusDovetail_8382:HG2_PB_HySA_7472:HG2_Ill_SVrefine2DISCOVARplusDovetail_9093:HG2_Ill_MetaSV_3425:HG2_Ill_GATKHCSBGrefine_2657:HG2_10X_SVrefine210Xhap12_2937;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2937:HG2_Ill_GATKHCSBGrefine_2657:HG2_Ill_MetaSV_3425:HG2_Ill_SVrefine2DISCOVARplusDovetail_9093:HG2_PB_HySA_7472:HG2_PB_SVrefine2Falcon1plusDovetail_8382:HG2_PB_SVrefine2Falcon2Bionano_1859:HG2_PB_SVrefine2PB10Xhap12_2883:HG2_PB_SVrefine2PBcRplusDovetail_7770:HG2_PB_pbsv_3911:HG3_Ill_GATKHCSBGrefine_2661:HG3_Ill_MetaSV_3587:HG3_Ill_SVrefine2DISCOVARDovetail_3076:HG3_PB_SVrefine2Falcon1Dovetail_2464:HG3_PB_SVrefine2PBcRDovetail_1847:HG3_PB_pbsv_3829:HG4_Ill_GATKHCSBGrefine_2768:HG4_Ill_MetaSV_3570:HG4_Ill_SVrefine2DISCOVARDovetail_3062:HG4_PB_SVrefine2Falcon1Dovetail_2401:HG4_PB_SVrefine2PBcRDovetail_2037:HG4_PB_pbsv_3942;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00821307;ClusterMaxSizeDiff=0.00821307;ClusterMaxEditDist=0.00821307;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-4269;DistBack=14920;DistForward=-3847;DistMin=-3847;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=3:186581016-186585302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2646.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:93:1/1:0:29:0:14:./.:0:0:0:0:1/1:0:47:1/1:3:297:4291:.:.
chr3	186826655	HG3_Ill_MetaSV_3588	TAAAATTTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2939:HG4_Ill_GATKHCSBGrefine_2770:HG3_Ill_GATKHCSBGrefine_2664:HG2_Ill_GATKHCSBGrefine_2660:HG4_PB_assemblyticsfalcon_18226:HG4_PB_SVrefine2PBcRDovetail_2038:HG4_PB_SVrefine2Falcon1Dovetail_2404:HG4_Ill_manta_963:HG2_Ill_manta_1110:HG2_10X_allpass_611:HG4_Ill_MetaSV_3572:HG3_Ill_MetaSV_3589:HG2_Ill_MetaSV_3427:HG4_PB_pbsv_3945:HG4_PB_HySA_5920:HG2_PB_assemblyticsfalcon_18632:HG2_PB_assemblyticsPBcR_18033:HG3_PB_assemblyticsfalcon_18536:HG4_Ill_Krunchall_5840:HG3_PB_pbsv_3832:HG3_Ill_Krunchall_5536:HG2_PB_pbsv_3915:HG2_Ill_Krunchall_5626:HG3_PB_HySA_6123:HG2_Ill_tnscope_416:HG4_Ill_scalpel_3807:HG4_Ill_SVrefine2DISCOVARDovetail_3063:HG4_Ill_MetaSV_3571:HG4_10X_allpass_711:HG3_PB_SVrefine2PBcRDovetail_1848:HG3_PB_SVrefine2Falcon1Dovetail_2465:HG3_Ill_MetaSV_3588:HG3_10X_allpass_764:HG2_PB_SVrefine2PBcRplusDovetail_7773:HG2_PB_SVrefine2PB10Xhap12_2885:HG2_PB_SVrefine2Falcon2Bionano_1860:HG2_PB_SVrefine2Falcon1plusDovetail_8384:HG2_PB_HySA_7477:HG2_Ill_scalpel_3887:HG2_Ill_SVrefine2DISCOVARplusDovetail_9094:HG2_Ill_MetaSV_3426;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2939:HG4_Ill_scalpel_3807:HG4_Ill_SVrefine2DISCOVARDovetail_3063:HG4_Ill_MetaSV_3571:HG4_10X_allpass_711:HG3_PB_SVrefine2PBcRDovetail_1848:HG3_PB_SVrefine2Falcon1Dovetail_2465:HG3_Ill_MetaSV_3588:HG3_10X_allpass_764:HG2_PB_SVrefine2PBcRplusDovetail_7773:HG2_PB_SVrefine2PB10Xhap12_2885:HG2_PB_SVrefine2Falcon2Bionano_1860:HG2_PB_SVrefine2Falcon1plusDovetail_8384:HG2_PB_HySA_7477:HG2_Ill_scalpel_3887:HG2_Ill_SVrefine2DISCOVARplusDovetail_9094:HG2_Ill_MetaSV_3426;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0674157;ClusterMaxSizeDiff=0.0674157;ClusterMaxEditDist=0.0674157;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=23121;DistForward=31306;DistMin=23121;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=3:186826656-186826979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:74:1/1:3:21:0:21:./.:0:0:0:0:1/1:0:49:./.:2:20:.:.:.
chr3	188304831	HG2_Ill_manta_1112	TAAAGAAAGTTGGCGCTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_521:HG4_PB_HySA_5930:HG4_Ill_Krunchall_5855:HG3_PB_pbsv_3839:HG3_Ill_Krunchall_5554:HG4_PB_assemblyticsfalcon_18238:HG3_PB_assemblyticsfalcon_18550:HG2_PB_assemblyticsfalcon_18642:HG2_PB_assemblyticsPBcR_18046:HG4_PB_pbsv_3952:HG2_PB_pbsv_3919:HG4_Ill_MetaSV_3573:HG3_PB_HySA_6134:HG3_Ill_MetaSV_3590:HG2_PB_HySA_7488:HG2_Ill_tnscope_417:HG2_Ill_MetaSV_3429:HG4_PB_SVrefine2Falcon1Dovetail_2405:HG4_Ill_scalpel_3815:HG4_Ill_manta_965:HG4_Ill_SVrefine2DISCOVARDovetail_3067:HG4_Ill_GATKHCSBGrefine_2772:HG4_10X_allpass_712:HG3_PB_SVrefine2PBcRDovetail_1849:HG3_Ill_scalpel_3994:HG3_Ill_manta_896:HG3_Ill_SVrefine2DISCOVARDovetail_3084:HG3_Ill_GATKHCSBGrefine_2666:HG3_10X_allpass_766:HG2_PB_SVrefine2PBcRplusDovetail_7776:HG2_PB_SVrefine2PB10Xhap12_2888:HG2_Ill_scalpel_3899:HG2_Ill_manta_1112:HG2_Ill_SVrefine2DISCOVARplusDovetail_9098:HG2_Ill_GATKHCSBGrefine_2662:HG2_10X_allpass_612:HG2_10X_SVrefine210Xhap12_2941;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2941:HG2_10X_allpass_612:HG2_Ill_GATKHCSBGrefine_2662:HG2_Ill_SVrefine2DISCOVARplusDovetail_9098:HG2_Ill_manta_1112:HG2_Ill_scalpel_3899:HG2_PB_SVrefine2PB10Xhap12_2888:HG2_PB_SVrefine2PBcRplusDovetail_7776:HG3_10X_allpass_766:HG3_Ill_GATKHCSBGrefine_2666:HG3_Ill_SVrefine2DISCOVARDovetail_3084:HG3_Ill_manta_896:HG3_Ill_scalpel_3994:HG3_PB_SVrefine2PBcRDovetail_1849:HG4_10X_allpass_712:HG4_Ill_GATKHCSBGrefine_2772:HG4_Ill_SVrefine2DISCOVARDovetail_3067:HG4_Ill_manta_965:HG4_Ill_scalpel_3815:HG4_PB_SVrefine2Falcon1Dovetail_2405;NumExactMatchSVs=20;ClusterMaxShiftDist=0.11026;ClusterMaxSizeDiff=0.11026;ClusterMaxEditDist=0.11026;PBcalls=14;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=23582;DistForward=5186;DistMin=5186;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=3:188304832-188305182;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:1/1:0:22:0:11:./.:0:0:0:0:1/1:0:33:0/1:4:12:.:.:.
chr3	189224507	HG4_10X_allpass_713	CACTACGGCATAGACAATATTCTATACTCTCTGATATTAATGTGCCTACTTGATTTTGGAACTCTTCAGAGAACACATGGAGGTCAGTACTCATTTCATCTGGAAATCTTGCCTACTTAATGTTAAGGCAGGCACCTAAGCTGTATTTGATGCCAAGTACACAGCAAAACTTCTACCTGAAAGAATGAATAATAAAAGAAATTCAACAGCCACTGTGGAGAACAGTATGGAGGCTCCTCAAAAAACTGAAAATAAAGCTCCTGTATCATCCAGCAATTCCACTGCTAGGTATTTACCCCAAAGAAAGGAAATCAGTACACTGAAGAGATATACTCCCATGTTTATTGCAGCACTATTCACAATAGCCAAGATTTGGAATCAAGTGTCCATCAACAGATGAATGAATAAAGAAAATGTGGTACATAAACACAATGGGATATTATCCAGCCATAAAATATAAAATCCGGACATTTGCAACAACACAGATGGAAATGTAGGGCATTATGTTAAGTGGAATAAGCCAGGCACAGAAAGACAAATTTTGCCTGTACTCGCTCATGTGGGAGCTAAATTTTAAACAATTGAACTCACAGAGATAAAGGGCAAAATGACGGTTACCAGAGGCTGGGAAGGTTAGTGAGCAGGGAGGGGAAAGTGGGGATTGTAAATGGGTGCAAAAATATGGCCAGATAGAATGACTAAGATCTAGTGTTTGATAGCTCAATGAGGTGACTACGGTCCACGATCATTTATTCTATATTTTAAAACAACTAAGAGTCGAATTGGAATGTTCTCAACACATAGAAATTATAAATGCTTGAGATAATGGATATGTCAATTACCCTGATGTCATTATTATACATTG	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_5656:HG4_PB_SVrefine2PBcRDovetail_2042:HG4_Ill_manta_970:HG4_Ill_SVrefine2DISCOVARDovetail_3076:HG4_Ill_GATKHCSBGrefine_2776:HG4_10X_allpass_713:HG3_PB_pbsv_3843:HG3_PB_SVrefine2PBcRDovetail_1851:HG3_PB_SVrefine2Falcon1Dovetail_2469:HG3_Ill_manta_900:HG3_Ill_GATKHCSBGrefine_2672:HG3_10X_allpass_767:HG2_PB_pbsv_3926:HG2_PB_assemblyticsfalcon_18654:HG2_PB_SVrefine2PBcRplusDovetail_7782:HG2_PB_SVrefine2PB10Xhap12_2895:HG2_PB_SVrefine2Falcon1plusDovetail_8391:HG2_Ill_manta_1114:HG2_Ill_breakscan11_522:HG2_Ill_GATKHCSBGrefine_2667:HG2_10X_SVrefine210Xhap12_2946:HG4_Ill_Krunchall_5868:HG3_Ill_Krunchall_5568:HG2_Ill_Krunchall_5657:HG2_10X_allpass_613:HG2_PB_assemblyticsPBcR_18063:HG3_PB_assemblyticsfalcon_18565:HG4_Ill_MetaSV_3576:HG3_Ill_MetaSV_3591:HG2_Ill_tnscope_418:HG2_Ill_MetaSV_3433:HG4_PB_pbsv_3958:HG4_Ill_Krunchall_5867;NumClusterSVs=33;ExactMatchIDs=HG2_PB_assemblyticsPBcR_18063:HG2_10X_SVrefine210Xhap12_2946:HG2_Ill_GATKHCSBGrefine_2667:HG2_Ill_breakscan11_522:HG2_Ill_manta_1114:HG2_PB_SVrefine2Falcon1plusDovetail_8391:HG2_PB_SVrefine2PB10Xhap12_2895:HG2_PB_SVrefine2PBcRplusDovetail_7782:HG2_PB_assemblyticsfalcon_18654:HG2_PB_pbsv_3926:HG3_10X_allpass_767:HG3_Ill_GATKHCSBGrefine_2672:HG3_Ill_manta_900:HG3_PB_SVrefine2Falcon1Dovetail_2469:HG3_PB_SVrefine2PBcRDovetail_1851:HG3_PB_pbsv_3843:HG4_10X_allpass_713:HG4_Ill_GATKHCSBGrefine_2776:HG4_Ill_SVrefine2DISCOVARDovetail_3076:HG4_Ill_manta_970:HG4_PB_SVrefine2PBcRDovetail_2042;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0127462;ClusterMaxSizeDiff=0.00462963;ClusterMaxEditDist=0.0602549;PBcalls=12;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-864;DistBack=0;DistForward=-864;DistMin=-864;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:189224508-189225371;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2649.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:41:./.:14:28:29:4:./.:0:0:0:0:0/1:60:19:0/1:78:28:.:.:.
chr3	189264099	HG3_Ill_svaba_5119	CAAGAGTAGTAAAAGATTTGGGATCAAAAATCACTAGAAAATCTCACTTTTTAAAATTGTTGCTTAGTTCA	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_280:HG4_PB_pbsv_3959:HG2_PB_PB10Xdip_20318:HG3_PB_HySA_6153:HG3_PB_pbsv_3844:HG2_PB_pbsv_3927:HG4_PB_SVrefine2Falcon1Dovetail_2412:HG4_Ill_svaba_5138:HG4_Ill_manta_971:HG4_Ill_Krunchall_5870:HG4_Ill_GATKHCSBGrefine_2777:HG4_Ill_250bpfermikitraw_5613:HG3_PB_SVrefine2PBcRDovetail_1852:HG3_PB_SVrefine2Falcon1Dovetail_2470:HG3_Ill_svaba_5119:HG3_Ill_manta_901:HG3_Ill_SVrefine2DISCOVARDovetail_3089:HG3_Ill_Krunchall_5570:HG3_Ill_GATKHCSBGrefine_2673:HG3_Ill_250bpfermikitraw_5375:HG2_PB_SVrefine2PBcRplusDovetail_7783:HG2_PB_SVrefine2PB10Xhap12_2896:HG2_PB_SVrefine2Falcon2Bionano_1866:HG2_PB_HySA_7515:HG2_Ill_svaba_5026:HG2_Ill_manta_1115:HG2_Ill_SpiralSDKrefine_11750:HG2_Ill_GATKHCSBGrefine_2668:HG2_Ill_250bpfermikitraw_5540:HG4_Ill_Spiral_328:HG3_Ill_Spiral_4358;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5540:HG2_Ill_GATKHCSBGrefine_2668:HG2_Ill_SpiralSDKrefine_11750:HG2_Ill_manta_1115:HG2_Ill_svaba_5026:HG2_PB_HySA_7515:HG2_PB_SVrefine2Falcon2Bionano_1866:HG2_PB_SVrefine2PB10Xhap12_2896:HG2_PB_SVrefine2PBcRplusDovetail_7783:HG3_Ill_250bpfermikitraw_5375:HG3_Ill_GATKHCSBGrefine_2673:HG3_Ill_Krunchall_5570:HG3_Ill_SVrefine2DISCOVARDovetail_3089:HG3_Ill_manta_901:HG3_Ill_svaba_5119:HG3_PB_SVrefine2Falcon1Dovetail_2470:HG3_PB_SVrefine2PBcRDovetail_1852:HG4_Ill_250bpfermikitraw_5613:HG4_Ill_GATKHCSBGrefine_2777:HG4_Ill_Krunchall_5870:HG4_Ill_manta_971:HG4_Ill_svaba_5138:HG4_PB_SVrefine2Falcon1Dovetail_2412;NumExactMatchSVs=23;ClusterMaxShiftDist=0.167832;ClusterMaxSizeDiff=0.167832;ClusterMaxEditDist=0.172662;PBcalls=12;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=8603;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=3:189264100-189264240;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:33:0|1:31:2:2:26:./.:0:0:0:0:0/1:27:24:./.:.:.:.:.:.
chr3	189575894	HG2_PB_SVrefine2Falcon1plusDovetail_8392	TAAGAAAATGTTGTGTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_523:HG4_Ill_Krunchall_5874:HG2_Ill_Krunchall_5662:HG3_PB_assemblyticsfalcon_18572:HG2_PB_assemblyticsfalcon_18659:HG2_PB_assemblyticsPBcR_18067:HG3_PB_pbsv_3845:HG3_PB_HySA_6158:HG2_PB_HySA_7517:HG4_PB_assemblyticsfalcon_18254:HG4_PB_pbsv_3960:HG2_PB_pbsv_3928:HG4_Ill_MetaSV_3577:HG3_Ill_MetaSV_3592:HG2_Ill_tnscope_419:HG2_Ill_MetaSV_3434:HG4_PB_SVrefine2PBcRDovetail_2043:HG4_PB_SVrefine2Falcon1Dovetail_2413:HG4_PB_HySA_5951:HG4_Ill_svaba_5141:HG4_Ill_scalpel_3828:HG4_Ill_manta_972:HG4_Ill_SVrefine2DISCOVARDovetail_3078:HG4_Ill_GATKHCSBGrefine_2778:HG4_10X_allpass_714:HG3_PB_SVrefine2PBcRDovetail_1853:HG3_PB_SVrefine2Falcon1Dovetail_2471:HG3_Ill_svaba_5125:HG3_Ill_scalpel_4008:HG3_Ill_manta_902:HG3_Ill_SVrefine2DISCOVARDovetail_3092:HG3_Ill_GATKHCSBGrefine_2674:HG3_10X_allpass_768:HG2_PB_SVrefine2PBcRplusDovetail_7784:HG2_PB_SVrefine2PB10Xhap12_2897:HG2_PB_SVrefine2Falcon2Bionano_1867:HG2_PB_SVrefine2Falcon1plusDovetail_8392:HG2_Ill_svaba_5032:HG2_Ill_scalpel_3913:HG2_Ill_manta_1116:HG2_Ill_SVrefine2DISCOVARplusDovetail_9106:HG2_Ill_GATKHCSBGrefine_2669:HG2_10X_allpass_614:HG2_10X_SVrefine210Xhap12_2947;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2947:HG2_10X_allpass_614:HG2_Ill_GATKHCSBGrefine_2669:HG2_Ill_SVrefine2DISCOVARplusDovetail_9106:HG2_Ill_manta_1116:HG2_Ill_scalpel_3913:HG2_Ill_svaba_5032:HG2_PB_SVrefine2Falcon1plusDovetail_8392:HG2_PB_SVrefine2Falcon2Bionano_1867:HG2_PB_SVrefine2PB10Xhap12_2897:HG2_PB_SVrefine2PBcRplusDovetail_7784:HG3_10X_allpass_768:HG3_Ill_GATKHCSBGrefine_2674:HG3_Ill_SVrefine2DISCOVARDovetail_3092:HG3_Ill_manta_902:HG3_Ill_scalpel_4008:HG3_Ill_svaba_5125:HG3_PB_SVrefine2Falcon1Dovetail_2471:HG3_PB_SVrefine2PBcRDovetail_1853:HG4_10X_allpass_714:HG4_Ill_GATKHCSBGrefine_2778:HG4_Ill_SVrefine2DISCOVARDovetail_3078:HG4_Ill_manta_972:HG4_Ill_scalpel_3828:HG4_Ill_svaba_5141:HG4_PB_HySA_5951:HG4_PB_SVrefine2Falcon1Dovetail_2413:HG4_PB_SVrefine2PBcRDovetail_2043;NumExactMatchSVs=28;ClusterMaxShiftDist=0.111465;ClusterMaxSizeDiff=0.111465;ClusterMaxEditDist=0.111465;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=17768;DistForward=-301;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=3:189575895-189576234;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:1/1:0:26:2:30:./.:0:0:0:0:1/1:0:50:./.:2:25:.:.:.
chr3	189737344	HG2_Ill_breakscan11_524	GCTCATTATCGTTTCTATTACCATTAATTTTGCACATTTTAATAGTAAGAAGACAGATGACCTGGGTCTGTCTTTCATTTTTGAAACTTCAGCAAGCCACTCCATTGCCCCCCTCCTGTCAAAAGCCTCATTTATAATAATAGCAATGATGATCCTTGCTTGGGTTGCCTCAAGAAGTTGTGTGAGGAAGAAAAGGAAAAAATCCATGTGACATTACCTAGAAATTAAAAAATATATATATATATATATATATATATATATACTCACAAACCCACAATTGATGCTTCTGTAATTATTTCTATTTAAGTATGTCTTGTCTCCATCCTGATGACAAGGACTTGCCATATGTTTCATGTTATCTCAAGTGCTTCAGAAGAGTAGGCATTCAGTGGATATAAATAATAATGATGAGAATAAAATTTAACATACCTTACCCCATGAATACAATTCTGCGAGTAGTCATCATTGCCAGCAGGTGGGGGCACAAACCTGAAGACTTTAATTAGAAAGGTTCATAGTTGGTCTACTGCTGAAATATGGTGAAAAGCTATCAAATTAGTTCAAAGTTTCTTCCATTATCTGTGGTGGCTGCCACCTTCAGAAAGGCTAAGGCGTTCAACACCAGGTTTCTGGCAAAACAGAGACTGTAGGTTTCAGGAAACCTACACCAGGTATCTGAACAGCACTGGATATGAAATCAGGAATAAGTCTTAGCACACGAATGTGTGATCTTGCTAATGTAAACGTCAAAGGATTTAGAAAAAAGTAAAATGAATTAGAATTTTTCTTTTGCGAAAGAGTGGAAGAGTTGTCTCAATAACCAAGATTGCCTTCTCTTTTCCATCTTAATCCAAACATGTTTTTCTTCTTTTTAAAAAAATAAAGCAGCTTACTGGATTCCCAAATATAGTATTAATATCAGTGGTAACTTCAAAGAAGCCACGATCAGTTCTTTAAGGACTTTCCCTCCTAGCATCTTTTTTATGGCTCAATAGGCCTGACCTCCAGGTCTCATCTTAAAAGTCAGAGCTTTCCCCTTTCATGAAAGTCTCCTATGTCTCATCAGTGCCAGATACACAGCAAAGTTAAATAGGGTCACAGTTTAGCGTGGGTCTCTAGGGTGAAGCCCATCCAGGGGTGTGGTGATTTTTCCTATGCATGGTCTGGCTGGGCGGCTGCTACCCACACGTTGATTACTTTAAGCCTGCTGAAGTGCTTGAAGCCTAACTGGCCTTTTAGAAAGGCTTCCTAAGGAGTCCTTTTCCAAGGAGAGGTGGCATCTGTCAAAAATGTCAAACAAAAGAAAGCAATGTCTACAAAATCCCTATTAAAATATTGGGGTAAAAGCTGGATGGCTATGGAACTGCAAGGAACTTTTAAGTATAGTTTAGTCCAAATCCTTCAGTTTTATAAAAAGAGAAACTGAGACTCAAAAAGGCAAAATAATGTTTTCAAAGTCACTTGGAAAAATCTGAGACCCCAGGACCCTAAGTAACCATCTTTGCCTTACACCAGGCTAGAGTCCTCTAGATGTTTATTCTAAATAATGCCAACTACAGCCATCTGGAAACCAATATTTACAAAGCAGCCACCATGAACTGTTTCCAATAATCAGAAACTTGGTCTGAAAAATTAATAAAACAACAAAAAGTGCTTGCGAGGTTCCAGAGATTTTTCACCCTTTATGCAGATGTTTTAGTCTGGTGGAGAAATGAGCACAATCAGTGGTTCCCTTTCTTATGCATCAATGTGGCTCATTAAAACAATAATTTGCCTTTGTCTCTATTTTTTGTCATTTCCTTAAGATTGAAAAAGTAAAATTCAATTATTAAACTATTTCAGTTTGTTTTTAAAGTCTTCCTTTTTTCAATTTTTTGTTCTGTAACAAATAGATTTTCAACAATGTTATAATGCATAAATTCTAGCCAAATATATTTTTTCTTTTATAATTTCCTTTTTTAAAAAAGTAACTTTCTCTTCTCTCCAAATATTTCATCCCTAAATTATGTAAACTTTTCTCTTTCAGTTTTAAAAAATAAAATCCATACTTCTGGCTTAAATTGCACACATTTGTAATATTCATACCAACAGATGCCTATCCAGCTAGCTGTACATCTGCCTACCCACTCATCCATTCATCCATCCTTCCATCCATCTTCCCAGTTATTCACTTTTTCAATAAATCTTTAATGAGTGCCTTTCATGTGCCAGGCATAATGCTAGGTACTGGTGATCTGAGTGTTTAAAAAATAAGCATCTCTGACCTTGAGGATCTACTCCAGTGGTACTAAATTTGTAAATTCTGGATTTCGTTAGACAACTATGTACAATATTATATGATAGTGTGTTTCTCTAATGTAACTGACATTACAGGACAGTTCTTAAAAGCTGTCAGTGATACTTTATTGCCTATTCATTCAACAAATATGTAATGAATGTATATCATGTGCCAATTACTATTTTAGGGATACATTGATAAAAATAATGTTCTTCTAGGAATGTACAATGACATTAGCCTCTAAAGAGTATTGAGAGTATCTTGGTTACAAATGACTAACCAGACTTCTCCCAATAACTGAGAAACAAATTTTACCATTGATTTATTTTTCTTATAGTAAACATTAAAGAGCATCTCACAAATAATATTCCATATAATAAACAGTAAATTCTTAAAATTTACATATGTAACATTTGTGACTTTAGCTCTCTGGAAATGACCAAAGGCTTTTAAGAAGTAGTAGATTTGTAGTTTAAGGCACAAATGAGCCCCTCAGGGGTGGGGTGTGCATTCAAGAAAACAGATCCAGCCAGGGGACCAAAATGTTCAGCCCAAAGTGGCTTTGCTTTTCTAAACCCATGGTAACTAATGCAGTAACTCTCAGGATTCCATAAGACCTTTGTTTCTTTATGAAATATAAATAATGAAGTGAAAGTCTCCTTTAGGTATTTTATACAGAATAAACTTGTATATACTTTTTTATTTAACATATTATCCTCCAAGAAACATTATTTGTTAGTTAAATGCACATACACAAATTTCTCTATTTGCAAAGTTGGCAATTTAGAGGGTTTCTAAATAGATCAAAACCCCAAATGCCTTCAGAGGCGAGGCAGATAATATCAATAATGAAGTGGGTACTTTATAAAACCATTAGGCAGTGGTTATCAAATTCTGTTATGC	G	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3578:HG2_PB_pbsv_3929:HG4_10X_allpass_715:HG2_Ill_Krunchall_5666:HG2_10X_allpass_615:HG2_Ill_tnscope_420:HG4_PB_assemblyticsfalcon_18258:HG4_PB_SVrefine2Falcon1Dovetail_2414:HG3_PB_SVrefine2Falcon1Dovetail_2473:HG2_PB_SVrefine2PBcRplusDovetail_7785:HG2_PB_SVrefine2PB10Xhap12_2898:HG2_PB_SVrefine2Falcon2Bionano_1868:HG2_Ill_breakscan11_524:HG2_Ill_SpiralSDKrefine_11756:HG2_Ill_MetaSV_3435:HG4_PB_pbsv_3961;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_3435:HG2_Ill_SpiralSDKrefine_11756:HG2_Ill_breakscan11_524:HG2_PB_SVrefine2Falcon2Bionano_1868:HG2_PB_SVrefine2PB10Xhap12_2898:HG2_PB_SVrefine2PBcRplusDovetail_7785:HG3_PB_SVrefine2Falcon1Dovetail_2473:HG4_PB_SVrefine2Falcon1Dovetail_2414:HG4_PB_assemblyticsfalcon_18258;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0631579;ClusterMaxSizeDiff=0.0631579;ClusterMaxEditDist=0.0631579;PBcalls=8;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-3180;DistBack=11589;DistForward=-3180;DistMin=-3180;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=3:189737345-189740528;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2652.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:64:46:./.:38:3:9:19:./.:0:0:0:0:0/1:61:14:0/1:217:109:3446:.:.
chr3	190290639	HG4_10X_allpass_718	TAATGCTTTGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTTCTGGGATTACAGGCGTGAG	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_330:HG2_PB_SVrefine2PB10Xhap12_2904:HG2_PB_assemblyticsPBcR_18078:HG4_Ill_Krunchall_5889:HG2_Ill_Krunchall_5673:HG2_Ill_Spiral_282:HG2_PB_HySA_7529:HG2_Ill_tnscope_421:HG4_PB_pbsv_3968:HG4_PB_assemblyticsfalcon_18262:HG4_PB_SVrefine2PBcRDovetail_2044:HG4_PB_SVrefine2Falcon1Dovetail_2415:HG4_Ill_scalpel_3839:HG4_Ill_manta_976:HG4_Ill_GATKHCSBGrefine_2783:HG4_10X_allpass_718:HG3_PB_assemblyticsfalcon_18583:HG3_PB_SVrefine2Falcon1Dovetail_2476:HG2_PB_pbsv_3938:HG2_PB_SVrefine2PBcRplusDovetail_7789:HG2_PB_SVrefine2PB10Xhap12_2903:HG2_PB_SVrefine2Falcon2Bionano_1873:HG2_PB_SVrefine2Falcon1plusDovetail_8394:HG2_Ill_scalpel_3919:HG2_Ill_manta_1118:HG2_Ill_SVrefine2DISCOVARplusDovetail_9109:HG2_Ill_GATKHCSBGrefine_2673:HG2_10X_allpass_617:HG2_10X_SVrefine210Xhap12_2950;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2950:HG2_10X_allpass_617:HG2_Ill_GATKHCSBGrefine_2673:HG2_Ill_SVrefine2DISCOVARplusDovetail_9109:HG2_Ill_manta_1118:HG2_Ill_scalpel_3919:HG2_PB_SVrefine2Falcon1plusDovetail_8394:HG2_PB_SVrefine2Falcon2Bionano_1873:HG2_PB_SVrefine2PB10Xhap12_2903:HG2_PB_SVrefine2PBcRplusDovetail_7789:HG2_PB_pbsv_3938:HG3_PB_SVrefine2Falcon1Dovetail_2476:HG3_PB_assemblyticsfalcon_18583:HG4_10X_allpass_718:HG4_Ill_GATKHCSBGrefine_2783:HG4_Ill_manta_976:HG4_Ill_scalpel_3839:HG4_PB_SVrefine2Falcon1Dovetail_2415:HG4_PB_SVrefine2PBcRDovetail_2044:HG4_PB_assemblyticsfalcon_18262:HG4_PB_pbsv_3968;NumExactMatchSVs=21;ClusterMaxShiftDist=0.168487;ClusterMaxSizeDiff=0.168487;ClusterMaxEditDist=0.168487;PBcalls=14;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-297;DistBack=62901;DistForward=51480;DistMin=51480;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=3:190290640-190290947;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2653.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:28:1|0:3:24:27:0:./.:0:0:0:0:0/1:22:17:./.:.:.:.:.:.
chr3	190468994	HG3_PB_SVrefine2Falcon1Dovetail_2478	GAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAA	TTTTTTTTTTTTTTTT	10	PASS	ClusterIDs=HG2_PB_HySA_7531:HG4_PB_HySA_5964:HG2_PB_SVrefine2PB10Xhap12_2906:HG2_PB_assemblyticsPBcR_18082:HG2_PB_SVrefine2PBcRplusDovetail_7790:HG4_PB_SVrefine2PBcRDovetail_2046:HG4_PB_assemblyticsfalcon_18265:HG4_PB_SVrefine2Falcon1Dovetail_2416:HG3_PB_SVrefine2Falcon1Dovetail_2478:HG2_PB_SVrefine2Falcon1plusDovetail_8396:HG4_PB_pbsv_3970:HG2_PB_pbsv_3940;NumClusterSVs=12;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_2478:HG4_PB_SVrefine2Falcon1Dovetail_2416:HG4_PB_assemblyticsfalcon_18265;NumExactMatchSVs=3;ClusterMaxShiftDist=0.212625;ClusterMaxSizeDiff=0.212625;ClusterMaxEditDist=0.212625;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=-133;DistBack=-149;DistForward=-149;DistMin=-149;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:190468994-190469142;PctSeqSimilarity=0.876;PctSizeSimilarity=0.911;PctRecOverlap=0.9799;SizeDiff=-13;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=92;MatchId=2654.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:24:0|1:32:0:2:21:./.:0:0:0:0:0/0:20:1:./.:.:.:.:.:.
chr3	190478458	HG3_Ill_GATKHCSBGrefine_2675	TGCTATGGTATAAAGTCATGGTGTTAGCAGGGCTGATTCTCTCTGAAGGTTCTGGAAAAGAATTGATTTCCTTGGATTTCCTGCTCTTAGAGGCTATCTGAATACATTGACTAGTGACTCCTTCCTCCATCAAAAACGTGTAATTTCGTTCTCTGATTTCATCATTACATGGCCTTC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_3971:HG4_Ill_Cortex_2534:HG3_Ill_Cortex_2543:HG2_Ill_Cortex_5966:HG3_PB_HySA_6166:HG4_PB_assemblyticsfalcon_18266:HG4_PB_SVrefine2PBcRDovetail_2047:HG4_PB_SVrefine2Falcon1Dovetail_2417:HG4_Ill_svaba_5152:HG4_Ill_scalpel_3840:HG4_Ill_SVrefine2DISCOVARDovetail_3081:HG4_Ill_GATKHCSBGrefine_2784:HG4_CG_vcfBeta_2687:HG4_10X_allpass_719:HG3_PB_pbsv_3854:HG3_PB_assemblyticsfalcon_18587:HG3_PB_SVrefine2Falcon1Dovetail_2479:HG3_Ill_svaba_5132:HG3_Ill_manta_903:HG3_Ill_MetaSV_3594:HG3_Ill_GATKHCSBGrefine_2675:HG3_10X_allpass_769:HG2_PB_assemblyticsfalcon_18672:HG2_PB_assemblyticsPBcR_18083:HG2_PB_SVrefine2PBcRplusDovetail_7791:HG2_PB_SVrefine2PB10Xhap12_2907:HG2_PB_SVrefine2Falcon2Bionano_1875:HG2_PB_SVrefine2Falcon1plusDovetail_8397:HG2_Ill_svaba_5042:HG2_Ill_scalpel_3921:HG2_Ill_manta_1119:HG2_Ill_SpiralSDKrefine_11762:HG2_Ill_SVrefine2DISCOVARplusDovetail_9111:HG2_Ill_MetaSV_3436:HG2_Ill_GATKHCSBGrefine_2675:HG2_CG_vcfBeta_2387:HG2_10X_allpass_618:HG2_10X_SVrefine210Xhap12_2951:HG4_Ill_Krunchall_5890:HG3_Ill_Krunchall_5583:HG2_PB_pbsv_3941:HG2_Ill_Krunchall_5675:HG4_Ill_MetaSV_3580:HG3_Ill_MetaSV_3593:HG2_PB_HySA_7532;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2951:HG2_10X_allpass_618:HG2_CG_vcfBeta_2387:HG2_Ill_GATKHCSBGrefine_2675:HG2_Ill_MetaSV_3436:HG2_Ill_SVrefine2DISCOVARplusDovetail_9111:HG2_Ill_SpiralSDKrefine_11762:HG2_Ill_manta_1119:HG2_Ill_scalpel_3921:HG2_Ill_svaba_5042:HG2_PB_SVrefine2Falcon1plusDovetail_8397:HG2_PB_SVrefine2Falcon2Bionano_1875:HG2_PB_SVrefine2PB10Xhap12_2907:HG2_PB_SVrefine2PBcRplusDovetail_7791:HG2_PB_assemblyticsPBcR_18083:HG2_PB_assemblyticsfalcon_18672:HG3_10X_allpass_769:HG3_Ill_GATKHCSBGrefine_2675:HG3_Ill_MetaSV_3594:HG3_Ill_manta_903:HG3_Ill_svaba_5132:HG3_PB_SVrefine2Falcon1Dovetail_2479:HG3_PB_assemblyticsfalcon_18587:HG3_PB_pbsv_3854:HG4_10X_allpass_719:HG4_CG_vcfBeta_2687:HG4_Ill_GATKHCSBGrefine_2784:HG4_Ill_SVrefine2DISCOVARDovetail_3081:HG4_Ill_scalpel_3840:HG4_Ill_svaba_5152:HG4_PB_SVrefine2Falcon1Dovetail_2417:HG4_PB_SVrefine2PBcRDovetail_2047:HG4_PB_assemblyticsfalcon_18266;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0169972;ClusterMaxSizeDiff=0.0169972;ClusterMaxEditDist=0.0170455;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=2;PBexactcalls=12;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=2;HG2count=20;HG3count=12;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-176;DistBack=-152;DistForward=-174;DistMin=-174;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:190478459-190478634;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2655.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:53:1/1:2:21:1:25:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr3	190787077	HG4_Ill_MetaSV_3581	AATTCTGTGATTGCGCATCTTAACAAATCTGATATATGTATAGAGAGAGAGAGAGAGACAGAGAGAGAAGACCAGAATGATGATAAAATTATCCTTGGTAAAAAATAGAGGTTATTTCTTTAGGACAAGAAAGGAGGAGTTGAGTTTTTGATAGATATTACAGTGATCTTGTTTTTGTCTGTGCTTAGACAAAATGATGACGTAAGTAGCCTTGCTTTTTCTCATCTTATCATGGCCTCAATGTACCCTTTCTCTGGAATTAGTATGTTGTAAAATTGTTTATGTTTAATAGGAGAATTATATCGCTAGCTGAGAGTGCCAAGTCAGCATTTCAATGTCAGGGGTTGTTTTTTCTTTGTTGCTGTTGTTGTTGTTGTTTTTTCTCTCTCTCCACCAGTATAATAAGATTCAGTGCAGTTAAATATGTGGGAAAGTATTTAAAGATGGAAATTTGAGATTGATCAGCACATAGAATTTTCAGATGATTCCACCTCCCTCCTGAAGAAGAAAAAGAAGAATGGATTTCATGCAATTATTAGATGACATACACATTTAAGGGAAGAAAAAGGAGATGAGGAAAGTAGGCAATGAATTGTCAGAGCATCATTAGAATTGCTATTATAATATTTTCATTTGCCTTTAAACAAATGTATAGGAAAAGATTGTAATTATTTACTAAAGTACCTAAGGCAATGAGGTAGATGCAGTAATTCACAGTCATATCTCCCTTCAAGATAATTAACTTACTTCAGCTCCTGGAAATACTGTCAGAAGAAATTTTCCAGCTTCCAGCACATTTAAAAAGTTGCCTAGGCTGAAGAGAGTCACCTCATACAAGGTCATGCAACTTTCTTCCTACAGCCTG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_3974:HG4_10X_allpass_720:HG4_Ill_Krunchall_5894:HG2_Ill_Krunchall_5678:HG2_PB_assemblyticsfalcon_18674:HG2_PB_assemblyticsPBcR_18086:HG2_10X_allpass_619:HG2_Ill_tnscope_422:HG4_Ill_manta_977:HG4_Ill_MetaSV_3581:HG4_Ill_GATKHCSBGrefine_2787:HG2_PB_SVrefine2PBcRplusDovetail_7792:HG2_PB_SVrefine2PB10Xhap12_2908:HG2_PB_SVrefine2Falcon2Bionano_1876:HG2_PB_SVrefine2Falcon1plusDovetail_8398:HG2_Ill_SpiralSDKrefine_11765:HG2_Ill_SVrefine2DISCOVARplusDovetail_9112:HG2_Ill_MetaSV_3438:HG2_Ill_GATKHCSBGrefine_2678:HG2_10X_SVrefine210Xhap12_2953:HG4_PB_SVrefine2PBcRDovetail_2048:HG2_PB_pbsv_3943;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2953:HG2_Ill_GATKHCSBGrefine_2678:HG2_Ill_MetaSV_3438:HG2_Ill_SVrefine2DISCOVARplusDovetail_9112:HG2_Ill_SpiralSDKrefine_11765:HG2_PB_SVrefine2Falcon1plusDovetail_8398:HG2_PB_SVrefine2Falcon2Bionano_1876:HG2_PB_SVrefine2PB10Xhap12_2908:HG2_PB_SVrefine2PBcRplusDovetail_7792:HG4_Ill_GATKHCSBGrefine_2787:HG4_Ill_MetaSV_3581:HG4_Ill_manta_977;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0104469;ClusterMaxSizeDiff=0.0104469;ClusterMaxEditDist=0.0104469;PBcalls=9;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-864;DistBack=-1;DistForward=-864;DistMin=-864;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=3:190787078-190787941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2656.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:40:./.:14:13:22:14:./.:0:0:0:0:0/1:47:15:0/1:68:40:.:.:.
chr3	190810486	HG2_Ill_250bpfermikitraw_5563	TATATGCATATACATGTGTATATAGATACACATATATGCATATACATGTGTATATAGGTACAC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_3975:HG4_Ill_250bpfermikitraw_5634:HG2_Ill_250bpfermikitraw_5563:HG2_PB_pbsv_3944;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5563:HG4_Ill_250bpfermikitraw_5634;NumExactMatchSVs=2;ClusterMaxShiftDist=0.015748;ClusterMaxSizeDiff=0.015748;ClusterMaxEditDist=0.0629921;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=-88;DistForward=-8;DistMin=-88;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=24;REFWIDENED=3:190810485-190810573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:33:./.:14:28:21:2:./.:0:0:0:0:./.:6:62:./.:.:.:.:.:.
chr3	191580879	HG4_PB_SVrefine2Falcon1Dovetail_2422	GAGACCCAGCAATTAGACGGCCAGTGAAAGATCTAGACCCAGCAATTAGACGGCCAGCGAAAGATCTAGACCCAGCAATTAGACGGCCAGCGAAAGATCTAGACCCAGCAATTAGACGGCCAGCGAAAGATCTAGACCCAGCAATTAGACGGCCAGCGAAAGATCTAGACCCAGCAATTAGACGGCCAGCGAAAGATCTAGACCCAGCAATTAGACGGCCAGCGAAAGATCTAGACCCAGCAATTAGACGGCCAGCGAAAGATCTAGACCCAGCAATTAGACGGCCAGCGAAAGATCT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7795:HG2_PB_pbsv_3949:HG3_PB_pbsv_3860:HG2_PB_SVrefine2PB10Xhap12_2912:HG2_Ill_MetaSV_3440:HG4_PB_HySA_5970:HG4_Ill_GATKHCSBGrefine_2790:HG3_Ill_MetaSV_3596:HG2_Ill_SpiralSDKrefine_11772:HG2_Ill_GATKHCSBGrefine_2681:HG2_10X_SVrefine210Xhap12_2956:HG4_PB_pbsv_3981:HG4_PB_SVrefine2PBcRDovetail_2052:HG4_PB_SVrefine2Falcon1Dovetail_2422:HG4_Ill_SVrefine2DISCOVARDovetail_3085:HG2_PB_SVrefine2Falcon2Bionano_1879:HG2_PB_SVrefine2Falcon1plusDovetail_8402:HG2_Ill_SVrefine2DISCOVARplusDovetail_9114:HG3_PB_SVrefine2PBcRDovetail_1861:HG3_PB_SVrefine2Falcon1Dovetail_2483:HG3_Ill_SVrefine2DISCOVARDovetail_3103;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9114:HG2_PB_SVrefine2Falcon1plusDovetail_8402:HG2_PB_SVrefine2Falcon2Bionano_1879:HG4_Ill_SVrefine2DISCOVARDovetail_3085:HG4_PB_SVrefine2Falcon1Dovetail_2422:HG4_PB_SVrefine2PBcRDovetail_2052;NumExactMatchSVs=6;ClusterMaxShiftDist=0.252354;ClusterMaxSizeDiff=0.252354;ClusterMaxEditDist=0.25283;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-297;DistBack=10097;DistForward=-296;DistMin=-296;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=129;REFWIDENED=3:191580913-191581305;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=0.9195;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=1;TruScore=97;MatchId=2658.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:1:26:0:24:./.:0:0:0:0:0/1:7:15:./.:.:.:.:.:.
chr3	191856085	HG2_10X_SVrefine210Xhap12_2957	TGAAAACCTTTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_331:HG4_Ill_Krunchall_5903:HG2_Ill_Krunchall_5687:HG4_PB_assemblyticsfalcon_18280:HG3_PB_assemblyticsfalcon_18597:HG2_PB_assemblyticsfalcon_18683:HG2_PB_assemblyticsPBcR_18095:HG3_PB_HySA_6171:HG3_Ill_MetaSV_3597:HG2_Ill_tnscope_424:HG2_Ill_MetaSV_3441:HG4_PB_pbsv_3982:HG4_PB_SVrefine2PBcRDovetail_2053:HG4_PB_SVrefine2Falcon1Dovetail_2423:HG4_PB_HySA_5972:HG4_Ill_svaba_5162:HG4_Ill_scalpel_3847:HG4_Ill_SVrefine2DISCOVARDovetail_3086:HG4_Ill_MetaSV_3584:HG4_Ill_GATKHCSBGrefine_2791:HG4_10X_allpass_721:HG3_PB_pbsv_3862:HG3_PB_SVrefine2PBcRDovetail_1862:HG3_PB_SVrefine2Falcon1Dovetail_2484:HG3_Ill_svaba_5139:HG3_Ill_scalpel_4016:HG3_Ill_manta_906:HG3_Ill_SVrefine2DISCOVARDovetail_3104:HG3_Ill_GATKHCSBGrefine_2679:HG3_10X_allpass_770:HG2_PB_pbsv_3950:HG2_PB_SVrefine2PBcRplusDovetail_7796:HG2_PB_SVrefine2PB10Xhap12_2913:HG2_PB_SVrefine2Falcon2Bionano_1880:HG2_PB_SVrefine2Falcon1plusDovetail_8403:HG2_Ill_svaba_5049:HG2_Ill_scalpel_3927:HG2_Ill_manta_1122:HG2_Ill_breakscan11_526:HG2_Ill_SVrefine2DISCOVARplusDovetail_9116:HG2_Ill_GATKHCSBGrefine_2682:HG2_10X_allpass_621:HG2_10X_SVrefine210Xhap12_2957;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2957:HG2_10X_allpass_621:HG2_Ill_GATKHCSBGrefine_2682:HG2_Ill_SVrefine2DISCOVARplusDovetail_9116:HG2_Ill_breakscan11_526:HG2_Ill_manta_1122:HG2_Ill_scalpel_3927:HG2_Ill_svaba_5049:HG2_PB_SVrefine2Falcon1plusDovetail_8403:HG2_PB_SVrefine2Falcon2Bionano_1880:HG2_PB_SVrefine2PB10Xhap12_2913:HG2_PB_SVrefine2PBcRplusDovetail_7796:HG2_PB_pbsv_3950:HG3_10X_allpass_770:HG3_Ill_GATKHCSBGrefine_2679:HG3_Ill_SVrefine2DISCOVARDovetail_3104:HG3_Ill_manta_906:HG3_Ill_scalpel_4016:HG3_Ill_svaba_5139:HG3_PB_SVrefine2Falcon1Dovetail_2484:HG3_PB_SVrefine2PBcRDovetail_1862:HG3_PB_pbsv_3862:HG4_10X_allpass_721:HG4_Ill_GATKHCSBGrefine_2791:HG4_Ill_MetaSV_3584:HG4_Ill_SVrefine2DISCOVARDovetail_3086:HG4_Ill_scalpel_3847:HG4_Ill_svaba_5162:HG4_PB_HySA_5972:HG4_PB_SVrefine2Falcon1Dovetail_2423:HG4_PB_SVrefine2PBcRDovetail_2053:HG4_PB_pbsv_3982;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0750751;ClusterMaxSizeDiff=0.0750751;ClusterMaxEditDist=0.0750751;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-338;DistBack=22608;DistForward=20031;DistMin=20031;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=3:191856086-191856436;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:74:1/1:2:30:2:24:./.:0:0:0:0:1/1:0:42:./.:2:13:.:.:.
chr3	192063181	HG4_Ill_GATKHCSBGrefine_2792	TAAGATATAACATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_527:HG2_PB_assemblyticsfalcon_18685:HG2_PB_pbsv_3951:HG4_Ill_Krunchall_5905:HG2_Ill_Krunchall_5690:HG4_PB_pbsv_3983:HG2_Ill_tnscope_425:HG2_Ill_MetaSV_3442:HG4_PB_SVrefine2PBcRDovetail_2054:HG4_Ill_manta_978:HG4_Ill_MetaSV_3585:HG4_Ill_GATKHCSBGrefine_2792:HG4_10X_allpass_722:HG2_PB_SVrefine2Falcon2Bionano_1881:HG2_PB_SVrefine2Falcon1plusDovetail_8404:HG2_Ill_manta_1123:HG2_Ill_GATKHCSBGrefine_2683:HG2_10X_allpass_622:HG2_10X_SVrefine210Xhap12_2958:HG4_Ill_Spiral_332:HG2_Ill_Spiral_283;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2958:HG2_10X_allpass_622:HG2_Ill_GATKHCSBGrefine_2683:HG2_Ill_manta_1123:HG2_PB_SVrefine2Falcon1plusDovetail_8404:HG2_PB_SVrefine2Falcon2Bionano_1881:HG4_10X_allpass_722:HG4_Ill_GATKHCSBGrefine_2792:HG4_Ill_MetaSV_3585:HG4_Ill_manta_978:HG4_PB_SVrefine2PBcRDovetail_2054;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0821018;ClusterMaxSizeDiff=0.0821018;ClusterMaxEditDist=0.0821018;PBcalls=6;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=3472;DistForward=-300;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=3:192063182-192063504;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2660.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:19:0|1:35:0:0:17:./.:0:0:0:0:0/1:47:15:./.:35:3:.:.:.
chr3	192358822	HG2_Ill_SVrefine2DISCOVARplusDovetail_9117	TGATCCACCTGCCTCAGCCTCCCAAAATACTGGGACTACAGTTGTGAGCCATAGTGCCTGGCCTTTCACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCTGCCACTACGCCCGCCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9117:HG2_PB_pbsv_3952:HG4_PB_pbsv_3984:HG4_PB_SVrefine2Falcon1Dovetail_2424:HG4_PB_HySA_5978:HG4_PB_SVrefine2PBcRDovetail_2055:HG4_Ill_SVrefine2DISCOVARDovetail_3089:HG3_PB_SVrefine2Falcon1Dovetail_2485;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9117:HG4_PB_SVrefine2PBcRDovetail_2055:HG4_Ill_SVrefine2DISCOVARDovetail_3089:HG3_PB_SVrefine2Falcon1Dovetail_2485;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0428336;ClusterMaxSizeDiff=0.0428336;ClusterMaxEditDist=0.0856672;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-309;DistBack=-397;DistForward=-1;DistMin=-397;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=363;REFWIDENED=3:192358823-192359494;PctSeqSimilarity=0.837;PctSizeSimilarity=0.9709;PctRecOverlap=0.771;SizeDiff=9;StartDistance=-71;EndDistance=-62;GTMatch=0;TruScore=85;MatchId=2661.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:19:./.:29:2:11:14:./.:0:0:0:0:0/0:35:1:0/0:35:2:.:.:.
chr3	192673319	HG2_Ill_250bpfermikitraw_5578	TTAGGGTACAACCTCTCCCTTGAATATTAGTTTTAATTCATTATTAATATGAATTCACTTTTACTTCTA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_528:HG4_PB_HySA_5982:HG4_Ill_Krunchall_5911:HG4_PB_pbsv_3985:HG4_PB_assemblyticsfalcon_18286:HG4_Ill_svaba_5169:HG4_Ill_scalpel_3855:HG4_Ill_manta_979:HG4_Ill_Krunchall_5910:HG4_Ill_GATKHC_6729:HG4_Ill_GATKHCSBGrefine_2793:HG4_Ill_Cortex_2537:HG4_Ill_250bpfermikitraw_5650:HG4_Ill_150bpfermikitraw_5379:HG4_CG_vcfBeta_2693:HG4_10X_allpass_723:HG3_PB_pbsv_3863:HG3_PB_assemblyticsfalcon_18603:HG3_Ill_svaba_5144:HG3_Ill_scalpel_4020:HG3_Ill_manta_907:HG3_Ill_Krunchall_5599:HG3_Ill_GATKHC_6665:HG3_Ill_GATKHCSBGrefine_2680:HG3_Ill_Cortex_2545:HG3_Ill_250bpfermikitraw_5399:HG3_Ill_150bpfermikitraw_5236:HG3_CG_vcfBeta_2315:HG3_10X_allpass_772:HG2_PB_pbsv_3953:HG2_PB_assemblyticsfalcon_18687:HG2_PB_assemblyticsPBcR_18101:HG2_Ill_svaba_5056:HG2_Ill_SpiralSDKrefine_11776:HG2_Ill_Krunchall_5694:HG2_Ill_GATKHC_6624:HG2_Ill_GATKHCSBGrefine_2684:HG2_Ill_Cortex_5978:HG2_Ill_250bpfermikitraw_5578:HG2_Ill_150bpfermikitraw_5162:HG2_CG_vcfBeta_2393:HG2_10X_allpass_623:HG3_PB_HySA_6176:HG2_PB_HySA_7548;NumClusterSVs=44;ExactMatchIDs=HG2_10X_allpass_623:HG2_CG_vcfBeta_2393:HG2_Ill_150bpfermikitraw_5162:HG2_Ill_250bpfermikitraw_5578:HG2_Ill_Cortex_5978:HG2_Ill_GATKHCSBGrefine_2684:HG2_Ill_GATKHC_6624:HG2_Ill_Krunchall_5694:HG2_Ill_SpiralSDKrefine_11776:HG2_Ill_svaba_5056:HG2_PB_assemblyticsPBcR_18101:HG2_PB_assemblyticsfalcon_18687:HG2_PB_pbsv_3953:HG3_10X_allpass_772:HG3_CG_vcfBeta_2315:HG3_Ill_150bpfermikitraw_5236:HG3_Ill_250bpfermikitraw_5399:HG3_Ill_Cortex_2545:HG3_Ill_GATKHCSBGrefine_2680:HG3_Ill_GATKHC_6665:HG3_Ill_Krunchall_5599:HG3_Ill_manta_907:HG3_Ill_scalpel_4020:HG3_Ill_svaba_5144:HG3_PB_assemblyticsfalcon_18603:HG3_PB_pbsv_3863:HG4_10X_allpass_723:HG4_CG_vcfBeta_2693:HG4_Ill_150bpfermikitraw_5379:HG4_Ill_250bpfermikitraw_5650:HG4_Ill_Cortex_2537:HG4_Ill_GATKHCSBGrefine_2793:HG4_Ill_GATKHC_6729:HG4_Ill_Krunchall_5910:HG4_Ill_manta_979:HG4_Ill_scalpel_3855:HG4_Ill_svaba_5169:HG4_PB_assemblyticsfalcon_18286:HG4_PB_pbsv_3985;NumExactMatchSVs=39;ClusterMaxShiftDist=0.186047;ClusterMaxSizeDiff=0.170543;ClusterMaxEditDist=0.20155;PBcalls=10;Illcalls=28;TenXcalls=3;CGcalls=3;PBexactcalls=7;Illexactcalls=26;TenXexactcalls=3;CGexactcalls=3;HG2count=15;HG3count=14;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-68;DistBack=1540;DistForward=40358;DistMin=1540;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:192673318-192673389;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2662.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:49:./.:16:8:7:37:./.:0:0:0:0:0/1:39:33:./.:.:.:.:.:.
chr3	192744353	HG2_PB_pbsv_3954	TTTATTTTATTTTAGGAGGTCTTTTTTAAAGAAAAACTTTATTTTGAAATAATTATAGAAATACACAAAGTTGCAAACATAGTACAGAGAGGTCTAGTGTGTCCTTCCCTCAGTTTTCTCCATTGGTGCCGTCCTATTTAACTAGAACACAATATTGAACCTAGGAAATTGCCATTGGCACAGTGTGAGTGTGTACAGCTGTATGTCCCTTTTCACGTGTAGATTGATATGTCTACTGCAATTAAGATACAGAAGTAATCCATCACTACACTTATCCCTCTCCTTCTACTTCTTCATACTCACAACTCTCCCCTTTTCCTCTTTCTCTCATCCCCCCTGCCCCTTTTATTTTTTTGGGACAGAGTCTCCCTCTGTAGCCCAGGCTGGAGTGCAATGGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTCCCTCAACCTCCCAAGTAGCTGGGATTACAGGTGCCCACCACCACGTCTACCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTGCCATG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2960:HG3_PB_assemblyticsfalcon_18604:HG3_PB_SVrefine2Falcon1Dovetail_2486:HG2_PB_PB10Xdip_20337:HG2_PB_SVrefine2PB10Xhap12_2915:HG2_PB_assemblyticsfalcon_18688:HG4_PB_pbsv_3986:HG4_Ill_Krunchall_5912:HG3_Ill_Krunchall_5600:HG4_PB_assemblyticsfalcon_18287:HG4_PB_SVrefine2Falcon1Dovetail_2425:HG4_Ill_MetaSV_3587:HG4_Ill_GATKHCSBGrefine_2794:HG4_10X_allpass_724:HG3_PB_pbsv_3864:HG3_Ill_manta_908:HG3_Ill_MetaSV_3598:HG3_Ill_GATKHCSBGrefine_2681:HG3_10X_allpass_773:HG2_PB_pbsv_3954:HG2_Ill_SpiralSDKrefine_11777:HG2_Ill_GATKHCSBGrefine_2685:HG4_Ill_Spiral_333:HG3_Ill_Spiral_4383:HG2_Ill_tnscope_426:HG2_Ill_Spiral_284:HG3_PB_SVrefine2PBcRDovetail_1865:HG3_Ill_SVrefine2DISCOVARDovetail_3109:HG2_PB_SVrefine2Falcon1plusDovetail_8405;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2685:HG2_Ill_SpiralSDKrefine_11777:HG2_PB_pbsv_3954:HG3_10X_allpass_773:HG3_Ill_GATKHCSBGrefine_2681:HG3_Ill_MetaSV_3598:HG3_Ill_manta_908:HG3_PB_pbsv_3864:HG4_10X_allpass_724:HG4_Ill_GATKHCSBGrefine_2794:HG4_Ill_MetaSV_3587:HG4_PB_SVrefine2Falcon1Dovetail_2425:HG4_PB_assemblyticsfalcon_18287;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0280374;ClusterMaxSizeDiff=0.0261682;ClusterMaxEditDist=0.0561272;PBcalls=12;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-540;DistBack=-541;DistForward=-539;DistMin=-541;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=3:192744350-192744895;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:44:51:./.:24:24:14:18:./.:0:0:0:0:0/1:61:21:0/1:61:14:.:.:.
chr3	192875329	HG4_PB_SVrefine2Falcon1Dovetail_2426	TTCTTCAAATCAGTTCTTCAGTTGGACTTTTTGTATGAGTTTTCATATTGATTTTAGATACTCTTTTTCAGGTAACTCTGGGATCTATAATTCAGTATCTCCTGCCTCAGCTCAAAACACTAACTTCAAGGTATTTATCAGGAGGACAGTTATAATTAGGAAAATTAAATGACAAATTGAATAAAAGACTGATTACTTTCTTGTTATGTTCTTAAAATTATTTAACACATCTGCAGAGTCACAGTCTTGACTATCATGATCAGTGGCAGCTAAAATGCAAAAATGAACGGACCACTTTACTACTGTAGCTGTAGATGAGCAAAATACATCACCCCATGTAAGAAACAGCACTGAGTTCGACTGTGATTTCCTACTTACTGAAATCCTCCTCAGAAAGGAGAGGGAATGCTACTGATGCTCACCCAAGTGAGAAGAATCTATACCGTGGGGAGGGAAATAGCTGTAGAACACCAGATGTTTGCTAATTATCCTCAAATGAAATTAACTAGACAAAGTTTTAAACAAAGATAATTGGAAAGGGTAAAATAAGCTTATTCTTCCCTTGACTTTACAAGTAGGGGTAATAAATTCATCTAAAGTGCTCATCATTGCCTCTGCATCCAGTCCTACCTCCAGTTCTTAAGCCTCAGACCATATACCTTTCCTCTGCCATGGGAATCATATCCAGTGTCTCTATAGCTGGGTACTGGTCAGCTGAGAAATTCTCCAAGCCTCGCTCTCCTATTTCCCCTTCTTCTCCCCTTATGTATGACTATTCCTCATCTTAGCTCACTCTTCTTGGCCAGCTCAGTTAAAATCAGGTATAAAATGGCTTAGCACTTCCACCTCAAGACTTGACTGATAGTCACATCAGATGATGTCTTCAAAATCTCAGAACTTATTTTAACCTGAAAGCCCCTATAAAAAAGGTTTAGGCAAAAACCCAGTGATTTGACAGAATGCACCTCTACCCTTCCTGAAATAGAAGCTACTTCTGGAAAAGCATAGACCTTCTTTATGGAGGAACAATCAGTAAAAGCAAAGAACCTGGACAAAACTGAAGCTGTAATTCAAAGGAAATGGACCACACGGAAGAATGAGAGTTGGTCTTCACCAAAAACTGTTGGAGTGAAAGAAACAGACATATTAAAAAGTGATTTTATTTATATTATCAAGAAAATTCAAAAGGGAGCTCTAGCTCTAAAGCTAAAACAAATAGCCCTAAAGAGGAGCCCATCTTATATCAGGTAGAATTTTATGGACATATAAAAATGATTTCTAAATTAAAAACTATGACAGCAACAACAATATAAAATGGACACTTCTATCACTTCTCAGCCTTTTGGTTAAGATCAACTGCAAAATGGATACTCTTCAACATTACATTTCTAAAATATTAAAGCAAGTACAAGAATTTTGACCTCAAATATAACTCAGCATGACATAGAATCCAAGGGATATACTCCCTTCATAACTCTGTTGACATTTTCTCAAAAGGTTAATATCCTTGATATATAAAACATTCATGGCAAATAATGTTTTTGAGAAGAACAACAAAACCAAAAATGCATAACCAAAGACCAGCTTGCAGATGCTGTAGCTTCTGAAAGAAGAGGCTGGAATAGGACTTGTGTGCAAGAAATTTATCTGGGGCAGGGAATGAGGGGATGAACCCAGGTAGGCAGATGTGAGGAACTGAGCTGATTGAAATAGAGGAGAAAAAGTCAATACAAAGGTGTGTGACTGAGTTCCCACCAACTGAGGTTCAGTCCTTCTGGGATGTGCTCAAGAGTGCAGGGAATGCTCAGAACTGGCCACCCAAGGATTGTTGGAGAAAAGAATCTGCTCTTTGTCTTCCACACCCCACTGGTTGAAAGTTGTCCAGGGCTACTAACTCTCTAGCACTTCTGAGCTATTTGCAGAGTGAAATCTCACTGACATTCTGCTCCCCTGTGTTGGAGAGAACCTGGAGGCAGGAGCACAGAAGATATCGAGTGCCAAGGGAGTCCTCTGCCTGAGCTGTGGCTGGAACCAAGATGAGGCTGAGAGGTGTCTGGTATAATAAAAGATGAAATTAATGTGAGAAAAATACACCTGAAAAGCACTTACATTTGCTGGTACAAAGGAATGCAAATCACTACAACAATCAATATCTTTTCCTTTGATAAATTTAAAGTGATTTGTAAAATGATAATTCTTAATTTTTTAAAGATGTAGTAAGAGAGGAAGAGTTTTACTGCTAAAATGAATACATTTTATGAACTTCCTTGGACTAAACTAATGTTATAAATTTTTGTGGGCCAAATTGTGTCCCACCCCCCACCAAATTTATATGTTGAAATCCTAACCCCTAGTATGTCGGAATGTGACTATATTTGGAGATAGGCCTTTAAAGAGGTGATTAAGTTAAAATGAAGCCTTAGAGTGGGCCCTAATCCAATCTGAATGGTATCCTTAGAAGGAGAGGAAATTGGACACTCAGAGATATCAGGGAAGCATGCCCACAGAGGAAAGACTGTGTGAACACATAGCAAGAAGGCAGCCATCCTCAGAAGAAACCAAGCCTGCCATCATCTTGATCTTGAACTTGTAGGTTCCAGAATTGCAAGAAAATAAATTTATCTTGTTAAGTCACCCAATCTGTGGTATTCTCTTATGGCAGCCCTAGAGAACTCATACAAGAGTAAGAATCTTAAATATTAATATCTTCATACGCTGTGGCTACCACAGCCAATTCCTCTCAATACCCATTTTCCCATTTTTCCTTACTAATAGAACCTGAGTTTTTTCTTTTTGATTATTATTATTATTGAGAGTACAGCACTGTGCCCAGCACTAGGCTGTAGACCATGATTGGTCTAGGCCAACTCTGAAAATCCTATTCCTGTTTTCTCAGCATCTCTTGCAAGTAGTGTTGACTTTGTGACCCAGTTCTGGGCAGCAAGACTAAGGAGAATGTTCAGTGGGGCTTCTGAGAAACATTTTGCTTTCCTAATAGAAAAAGACAGATGAAGGCATTATGCATGTTCCCCCACCCCTTTTCCTGCTTTATACCTCAGACACCGATATGATGTGCTACCTATCTTTGCACAGCTCCAGCTTTACATTCTATTAGGTAAGACATTTCAATGCATCAGAGGGCCTCTGGTCTAATAGTTTTAACACATGCCCTTGGAATCAGTCTTATTGGACTAGCTTAGGTAACATGCACATAACTGAACCAATCATGAGGACCATAGTTGACTGATCTGAAGAGTGTTCCGACTCCTAGAGTGTAGGGTTGATGCCAGCCTTAGCCAACACTCATGGATGGAAAGTTGGGGAGGGGTTGCCCAAAGGGAAATCAAGGTGTTGATACCAGAATTTGGAGGAACGAATGATGATCAGGCAAAAACCAACTAACACAACTAATTGATGTGCTTTACACCTAACTAAGTTCTCCTTCAGGTCTCAGCTTGCCTATTATTTCCACTATGAACTTTTCCTGGCCAACCTCAATGCTGTCAGTTCTAGACTAGTTGCCCCTATTGTTTTTTTCCTATACCACCTGTACTTTCTTTATCACAGCACTTTTATATTGTGTTAAAATTGTCTGTTTGTTTCTCTTAATTCCTGATTAAACTACAAAGGCTATTAAGGCAGGAATCGTGATTATCTCATTCACCATTGCCTCTCTAGTGTCTACCTGTGCACCTAGTAAATAAACTTGATAAATATATGCTGAGTGAATAAAAATCTACTGCTAAATGGATATTTGGTAGACAAGTGTAATTGAAAATGCTTTCGGGCTGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCTGGCGGATCACCTGAAGTCAGGAGTTTGAGACTAGTCTAGCCAACATGGTGAAACCCCATCTCTGCTAAAAATAAAAAAAAATTAGCTGGGCGTGGTGGCACATGCCTGTAATCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATTGCTTGAACCAGGGAGGTGGAGGTTGCAGTGAGCTGAGATCACGCCATTGCACTCTAGTCTGAGCGACAGAGTGAGACACTGTCTCAAAAGAAAAAAAAAAGAAAAAAAAAGGAAAATGCTTTAAAGCACATGGACGTGATAGGTACTACAAAAAGAATGGACACATTGGTCTCTTGTTACCACACCCATGCACTTATTCAGTCCCTTGAAGGAGGAAGAGTGGATACATTGGTCAGAATCTAGAACATTCATTGGGGTACATTTACCAACATTCCTTAAAGATGAGCAACTCTGACTATTACAGTCTCTTTGTTTTCCTTTTGCAGATATAGACAGGGTTTTTCTCTTTGACACAGGCCTAACCAGGTTTCTTTCTTCTTTTCCATCCCCCTGAAATATGCAACTGAATGGTAAATTATGTCAGGGCTTGGTTGGCATATATCTCTTACTGAAAATGCACCTTGATCCTAGAATTTAGAGTAAAGATGGAGAACTAGAACCATTCTTTTCTCAACATTAGACCATGTGCTCCATCCTATACAGCTTATAAGAAGACCCTGAATGGGAAGTTACTGAGCTCTTACATATCTATTTAGAAAGCAGCATTTTGTTTCTCATCTTATCTAATTTTCTCTTGGGGAAGCATATAGGTACAGGTGGTTATGACGTAAGATCAGGTTGTTTCTTCATTCAAGACTGTAAGAGAATCACAAATACAACGCTAACCTCACAAATGTGACCGTAACCGCTCACTGATTCCTAAGGGGGCACCAGCTCATTCAGCACTTCTCATTTCCTCACACAGCCCCTCAACCAGCAGGAATGAGATTCTTCACTGCACAGAACACTCAAGGCAGGTGTGGTTCTGGCCTGAAAGAGAGATTGTCCAGTTCTTACAAAGTGCTGGTTGGCCTCAGTTTTATGCTGTTAGTGCCAATACAGTGCTTTTCATACAAACTGAGGACTAAACTCTGATTTTTTTTTTTTATCTTGCCCAAATTCCTATCTAAGGGGTCTGGGGAGTCATGCCCTACAAACCAAAAATTCTCATCAGATGTGTTTTATTTAACCCTGTAAATAGTGGCTTACTTTCCAATCTGACTCTGGCATAACAAGGAAGAAAATCAAAATATTTTACCCCAAAACATGTTTCTCTACCATATCTTGAAATGACCCTGCAAAGCCGTCTCTTGTGGGAAAAATCCATATTCTATAGAAAATCCCTTTTCCCCTTGTTTTCCTTCCTTCCTTTCCAGATCCAGGAGATCATCAACTAAGAGACTTTTAGGTCCGATAAAAAACATTTTACAACCCGCTCTCTCTCTCTCTCTCTGAAGTCTGCTACCTGAGAGCTTCCTCTGTACAATAAAACTTGGTCTCCATAATTTTTATCTTAACCTGAACATTTTCTATTCATCCCAGGTCTTCAGATAAACTCAACCAATTGTCAACCAGAAAATGTTTAAATTTACCTACAGGCTGGAAGCCCCTGCTTTGAGTTGTCCTGCCTTTCTGAACCACAGTAACCTATTTCTTACATGTATTTGATTGATGTCTCATGCCTCCCTAAAATATACAAAACCAAGCTGTACCCCGACCACCTTGGGCACATGTTCCCAGGACCTCCTGAGGGCTGTGTCATGGGCCGTGGTCACTCATATTTGGCTCAGAATAAATCTCTAAATATATTTTACAGTTTGACTCTTTTCATCAACAGAACCACCACGGAGAACAATGTGGGAATGATCCAGTCTTACAGAGATGACAGATAGGAGTGAGAGGAGTTTTTGCATTTTTAGTTTTTTGAATGTGTTTTTTGGTACAGCCTTAGTGAAACTTCATTAAGCAATGGCTAGGTACAGATTTGAGAGGCATTAACAATTTTTAGGAGCCTAATAGCTATCTATTAATTAATTTGACAAATATTTACTCTGAAATTCCAGTAACTAGGTCCTTGGTAGACTCTGGGGATGCAAAGATGGGGAAGGCAGGATCTCCTGGAGGAGAAAATATTCAGTTGGAGGAGAAAAGCACTTAAACAAATATTAGGTTGGTGTAAAAGTAATTGTGAGTTTTTTTCATTACTTTTAATAGCAAAAACTGCAATTACTTTTGTACCAACCTAATAATTATGATGCATCATGATGCTGAGGAATGAACTCAAATTGACCTCTGCCAGATCTTCCTTGCCTTGTAAAATCCTGTAAATCTTTTAAAGCCAACTCAAATCCTGCTTTCTCCAAGAATCCTAAGTGCTCAGTTCAGTCAAAACAAATCTCTCTTGCCCTCTAACTTATATATTAACAATATTATGTTTGTGTCTCTTTCCCATTTGATTTTATATTCTTGAAGGACAGAAGCTGTATCTTAGCCATCTGTGTATTCTCCAATTTGGCCAGCACAGTCTTTTTCATGTAGTAAATACTGAATGTTTGTTGAATTGAAATAAACTTTATTACATTAATCAGTTAGTTCTCATGGAGTTTCCAAATACATTGATTCTCTGTTGTGGAAGAGAAAGGACAACAGAAGCAACATATTTCTAATTAATAGTTTCAATTTTGGTGAGAAATTATTTGCCTGGAATCTAAAAAAAAGTACATGAAGTCTTAATTTTAATATCATTATAGTAAGTGTATGTTGTTTCCACTGAAAATAAGAGAAACACAAAGGAAAATAATTCATTCTACCAAAAGGACGCATGCACCCACATGTTCATTGCAGCACAATTCACAATAGCAAACATGTGGAATCAACCCTGTTGTCCATCCACAGTAAACTGCATAAAGAAAACGTGGTACATATATACCATAAAACACTATGCAGCCATAAAAAGGGCAAAATCATGTTCTTTGCAGCTACATAGATGCAGCTGGAGACCAGCATCCTAAGTGAGTTAACACAGAAAAAGAAAATCAAATACCACATGTTGTTACTTATAAGTGGAAGCTAAACATTGAGTACACATGGACATAATGAGAGGAACAATAGACACCGGGACTACTAGAAGGGGGAGGGAGGGAAGGAAAAGGATCAGGGTTGAAAAACTACCCACTGGGTACTATGCTCATTACCTGGGTGATGTGTTCAGTCATACTCCAAACCTCAGCATCATACAATACCTTCGTAACAAACCTGCACATGTACCCTGTGATTCTAAAATAAAAGAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCTCCATCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTGGAGTAGCTGGGACTACAGGCACCCGCCACCATGCCCGGCTGATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATTCCCCTGCCTCGGCCTCCTGAAGTGCTGGGATTACAGGCAGGAGCCACTGCGCCCAGCCCAACATGTAGATTTTTAGACATTATTTGCTGTCACTTGAAACTTAGAAAGATGATGGAATTGCAGACAATTTGAATTCAAGTTACTCTGTAATGCTAATGAACAGAATATATCTACTGATTATTACTGATTGTATTTGGAGAAGTTTAGATGGCGGTTACAGTGTTGGAAAGTAGGAATGTCAGAAATGGGTGTTGAGATCATGTGAAATAAAGTTACTATCAAAGATAGGAATTGAGATCATAGAGAATAAACTCGGAGATATGGGGTAAGCAAGAGCATGCAGAGAGACTTGAATGAGAGGAAGAATTCAGCACCAGATACAATGTAAAACAGGAGGCCATTTCTAGTTCTTGGTGAGAAGAATAGCTGACTGTAGTTACGGCCCTTTAAACTCACTGCTCTGAGCCACAGTTTAAAATGAGGTTTAGCAGGAGAGAGTTCCATGAAGAACCCCAAAAGTTAAAAAAAAGTATAAATTAATAGTTTTTAAAATAAAATGATACAAATGTTTTGGGAAAACTAATGAGGTATAAAATGGATTAGAAGGAAGAGGTCATAGAGACAGGAAATCCAGTTAAGGACAGCTTTATTTGTTCCAGTAAGAGGAGGTGAAGGCAGAGATTAGGATGGAAGACAGAAGGGATAGAAGTAAAGCTGAAGTTGCTCCATCTGCCAAGATGTCAGGTTACCTCTGAAAGCCTTTTCATTTACCAGTGATTCATTCTGTTTTGAGTTTTCTTCGGACTTCATTTTCCATTTGTTATTACTGATTACAATAATAAAGGTCTGATTTAGCACCCTCCCCATATGTTAAGGCCTCGAAGACAAACATAAATGACAAAGATGTGTCTTCTTTGAAAAATTCTTTGTGATTTTAATTTTTCACACACTCATGAAGTATAACTGAAAGAGATGGTGATTAAGATAATTTAGTATTGTTTTTCACCAAGATGCCTTGGATTTCTAGCATACTTTGATGTAGAGTATGCTATTCAGAGTACTAAGGTGTGAAGGATTTCTATGGCACTTTGCAATGGTTTCCACACAATGGCTGAAAATGTTTCTACGTGCCTGAGACAAAGGCTTTTAATCTTTTGCCCAAGGAGCAAGTTTGAGTTTGCCACATAAAATAGCACCCAAGGAACTGGGTCTTGCCTTCTAACGAAAGGGAAGCAATGGAGATGGAAATTTTCTTATAGTATTTTCTAAATGTCACTTTGTAGTATTAGATGGAGTTAACTGGCTAGAAATGTCTGAGCTAAAGTTCACTTAAGGTAATGGTTTTGGGTTACGTTTATCTTAGTCCATTCCTTAGTTTCCAAAAAACAAAAGATATTGAAATGCATGAATAAAAGGAGAATATTCAAGACAATAATAAAAAACAACCAGCTGCATTCCATTTTGGAATTAGGATTTTTTAAAAAGACAAGCTGTTAAAACGCGACTGCTCGTCTACTCCAATATGTTGAGAAACAGGGTCTCTGGTTATTAAAGCCAAAGCTGAAATTATTTTCAAATAATTATTATTCCATCATTTATAGTCCACTGAAAACATGCTTAAAGCGTAACTTGTTCTGGTCGCCAAAGGTGAAATGATAAAAGTCACTAAAACATGAACCTGAGAAGTATCTAAACCCACTTTTGCTTTGCCGTTGATGATTCCTTATCTTGCAACGATAATTTCCACCCAGCAAATATCCTTTGCCTGGGTTCATAGGACATATTTCTGCCATTTTTCTTGCATTGTTAATGAGTCGCCTGAAGCACGCAATCTGTGGTGGGACAGTTTTACTTTAAAAAGGTATAAATAGCCGGGCGCGGTGGCTCACGCCTGCAATTCCAACAGTTTGGGAGGCCAGGTGGGCAGATTACTTGAGGTCAGGAATTCAAGACCAGACTGGCCGATATGGTGAAACCCCGTCCCTACTAAAAATACAAAAAAATTAGCCGAGGGTGGTGGTGCACGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCTCTTGAGCCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCGCCATTGCCGCACTTCAGCCTGGGCGGCAGAGCAAGACTCCCAGACTCTGTCTAAGAACAACAACAACAACAACAACAAATATATATATATAAATGAGGCGGATTGTAGACTTGGGCGTTTCAAATATCCACAGTCCACTGCTAGTTCATTTTTCTTTCTTCTCCATTCCAAAAGCCAGTAGTTGTTTTCTTCCACGGGAATCTAGGCTTAATTTGGATTAAAATTGTCCTGGAATTTATGGGAACCTGCTTTTCTGAACTCCGGTCTTAAAAATCTTCCAGAATATAACATTTTCACAGATAAGAAGTTTCAGATTCTGTTCCTTTTGGCTTTAATGCAAGGTTTTCTATTTTTTTCCCCCTAAATCTACTATTAATATTTCTCTAAAAATGGCAAGCATTTTAAGAAACTTTCTTATAATTCTCTTGCCCATTCCTCCAATCCCCATATTGAATATTCACATTTTTCCTAAAAAGAACAACTATTTTACTTGATCTTGGTATCCTATTGTACTCTTCATAAACCAAAAAAAAAAAAAAACCCATAAATTTTACATCTTAACTTTCACAGTTACTACAATCTTAAGGACGCAGGTAAACTTTACTCATATAACTCAATGTGA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_427:HG4_Ill_Krunchall_5915:HG3_Ill_Krunchall_5604:HG3_10X_allpass_774:HG4_10X_allpass_725:HG3_Ill_Krunchall_5603:HG2_Ill_Krunchall_5697:HG2_10X_allpass_624:HG4_PB_pbsv_3987:HG4_PB_SVrefine2PBcRDovetail_2056:HG4_PB_SVrefine2Falcon1Dovetail_2426:HG4_Ill_SVrefine2DISCOVARDovetail_3093:HG4_Ill_MetaSV_3588:HG3_PB_pbsv_3865:HG3_PB_SVrefine2PBcRDovetail_1866:HG3_PB_SVrefine2Falcon1Dovetail_2487:HG3_Ill_SVrefine2DISCOVARDovetail_3110:HG3_Ill_MetaSV_3599:HG2_PB_pbsv_3955:HG2_PB_SVrefine2PBcRplusDovetail_7799:HG2_PB_SVrefine2PB10Xhap12_2916:HG2_PB_SVrefine2Falcon2Bionano_1882:HG2_PB_SVrefine2Falcon1plusDovetail_8406:HG2_Ill_SVrefine2DISCOVARplusDovetail_9119:HG2_Ill_MetaSV_3444:HG2_10X_SVrefine210Xhap12_2962;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2962:HG2_Ill_MetaSV_3444:HG2_Ill_SVrefine2DISCOVARplusDovetail_9119:HG2_PB_SVrefine2Falcon1plusDovetail_8406:HG2_PB_SVrefine2Falcon2Bionano_1882:HG2_PB_SVrefine2PB10Xhap12_2916:HG2_PB_SVrefine2PBcRplusDovetail_7799:HG2_PB_pbsv_3955:HG3_Ill_MetaSV_3599:HG3_Ill_SVrefine2DISCOVARDovetail_3110:HG3_PB_SVrefine2Falcon1Dovetail_2487:HG3_PB_SVrefine2PBcRDovetail_1866:HG3_PB_pbsv_3865:HG4_Ill_MetaSV_3588:HG4_Ill_SVrefine2DISCOVARDovetail_3093:HG4_PB_SVrefine2Falcon1Dovetail_2426:HG4_PB_SVrefine2PBcRDovetail_2056:HG4_PB_pbsv_3987;NumExactMatchSVs=18;ClusterMaxShiftDist=0.000595534;ClusterMaxSizeDiff=0.000595534;ClusterMaxEditDist=0.000595534;PBcalls=11;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-10076;DistBack=36301;DistForward=38578;DistMin=36301;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=3:192875330-192885408;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2664.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:58:59:0|1:49:0:0:30:./.:0:0:0:0:0/1:47:18:0/1:423:192:10384:.:.
chr3	193986032	HG2_Ill_manta_1124	TCCAGGTCCACGTCACCTCCATCAAGGCAGGAGAGGAGGGCCAGGTCCGCATCACCTCCATCAAGGCAGGAGAGGAGGG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_285:HG2_Ill_Krunchall_5707:HG4_PB_pbsv_3993:HG4_Ill_svaba_5179:HG4_Ill_manta_980:HG4_Ill_Krunchall_5923:HG4_Ill_GATKHC_6740:HG4_Ill_GATKHCSBGrefine_2797:HG4_Ill_250bpfermikitraw_5663:HG4_Ill_150bpfermikitraw_5392:HG2_PB_pbsv_3959:HG2_Ill_svaba_5065:HG2_Ill_manta_1124:HG2_Ill_SpiralSDKrefine_11788:HG2_Ill_Krunchall_5706:HG2_Ill_GATKHC_6636:HG2_Ill_GATKHCSBGrefine_2687:HG2_Ill_250bpfermikitraw_5590:HG2_Ill_150bpfermikitraw_5172:HG2_10X_allpass_625:HG4_Ill_Spiral_334;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_625:HG2_Ill_150bpfermikitraw_5172:HG2_Ill_250bpfermikitraw_5590:HG2_Ill_GATKHCSBGrefine_2687:HG2_Ill_GATKHC_6636:HG2_Ill_Krunchall_5706:HG2_Ill_SpiralSDKrefine_11788:HG2_Ill_manta_1124:HG2_Ill_svaba_5065:HG2_PB_pbsv_3959:HG4_Ill_150bpfermikitraw_5392:HG4_Ill_250bpfermikitraw_5663:HG4_Ill_GATKHCSBGrefine_2797:HG4_Ill_GATKHC_6740:HG4_Ill_Krunchall_5923:HG4_Ill_manta_980:HG4_Ill_svaba_5179:HG4_PB_pbsv_3993;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.0506329;PBcalls=2;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-78;DistBack=982;DistForward=7396;DistMin=982;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=78;REFWIDENED=3:193986033-193986188;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2665.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:18:./.:13:8:18:6:./.:0:0:0:0:0/1:22:19:./.:.:.:.:.:.
chr3	194102700	HG2_PB_SVrefine2PBcRplusDovetail_7806	TGGCCAGACGCAGGGGTGAGGGGCTGGAGAGGGGTGGGGTACCCTGGGCCCGGGCCAGACGCAGGGGTGAGGGGCTGGAGAAGGGTGGGGTACCCTGGGCCCGGGCCAGATGCAGGGGTGAGGGGCTGGAGAGGGGTGGGGTACCCTGGGCCCA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_3872:HG2_10X_SVrefine210Xhap12_2970:HG2_10X_SVrefine210Xhap12_2969:HG2_Ill_breakscan11_531:HG2_PB_pbsv_3964:HG3_PB_SVrefine2Falcon1Dovetail_2492:HG3_PB_SVrefine2PBcRDovetail_1870:HG2_PB_SVrefine2PBcRplusDovetail_7806:HG2_PB_SVrefine2PB10Xhap12_2923;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2923:HG2_PB_SVrefine2PBcRplusDovetail_7806:HG3_PB_SVrefine2PBcRDovetail_1870;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0651466;ClusterMaxSizeDiff=0.0651466;ClusterMaxEditDist=0.0915033;PBcalls=6;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-153;DistBack=-103;DistForward=70;DistMin=-103;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=214;REFWIDENED=3:194102701-194103067;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9481;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=97;MatchId=2666.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:23:1|0:4:23:21:0:./.:0:0:0:0:0/1:4:5:./.:.:.:.:.:.
chr3	194121164	HG4_Ill_MetaSV_3590	TAAGACTTCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGTGGGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCTAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCAGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTGTTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_286:HG4_Ill_Krunchall_5925:HG2_PB_assemblyticsfalcon_18698:HG2_PB_assemblyticsPBcR_18110:HG2_Ill_tnscope_428:HG4_PB_pbsv_3997:HG4_PB_SVrefine2PBcRDovetail_2059:HG4_PB_SVrefine2Falcon1Dovetail_2431:HG4_Ill_MetaSV_3590:HG4_Ill_GATKHCSBGrefine_2798:HG4_10X_allpass_726:HG3_PB_assemblyticsfalcon_18612:HG3_PB_SVrefine2Falcon1Dovetail_2493:HG2_PB_pbsv_3965:HG2_PB_SVrefine2PBcRplusDovetail_7807:HG2_PB_SVrefine2Falcon2Bionano_1889:HG2_PB_SVrefine2Falcon1plusDovetail_8413:HG2_Ill_manta_1126:HG2_Ill_SpiralSDKrefine_11790:HG2_Ill_MetaSV_3447:HG2_Ill_GATKHCSBGrefine_2693:HG2_10X_allpass_627:HG2_10X_SVrefine210Xhap12_2971:HG2_Ill_breakscan11_532:HG4_Ill_Spiral_335;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2971:HG2_10X_allpass_627:HG2_Ill_GATKHCSBGrefine_2693:HG2_Ill_MetaSV_3447:HG2_Ill_SpiralSDKrefine_11790:HG2_Ill_manta_1126:HG2_PB_SVrefine2Falcon1plusDovetail_8413:HG2_PB_SVrefine2Falcon2Bionano_1889:HG2_PB_SVrefine2PBcRplusDovetail_7807:HG2_PB_pbsv_3965:HG3_PB_SVrefine2Falcon1Dovetail_2493:HG3_PB_assemblyticsfalcon_18612:HG4_10X_allpass_726:HG4_Ill_GATKHCSBGrefine_2798:HG4_Ill_MetaSV_3590:HG4_PB_SVrefine2Falcon1Dovetail_2431:HG4_PB_SVrefine2PBcRDovetail_2059:HG4_PB_pbsv_3997;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0198807;ClusterMaxSizeDiff=0.0198807;ClusterMaxEditDist=0.0198807;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-757;DistBack=18108;DistForward=-751;DistMin=-751;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=3:194121165-194121929;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2667.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:28:0|1:33:1:0:23:./.:0:0:0:0:0/1:42:20:0/1:60:19:.:.:.
chr3	194290222	HG3_PB_SVrefine2Falcon1Dovetail_2496	CTCATGCCTGTAATCCCAGCACTTTCGGAGGCAGAGACTGGTGGATTGGTCAGGCTTGAGGCCAGGAATTCGAGACCAGCCTGACCAACGTGGCGAAAATCCATCTCTACTAAAAAATACAAAAATTTAGTCGTGGTGCACACCTGTAAATTCCAGCTACTCAGGAGGCTGAGGCACAAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAATTTTTAATAAAATTTTATTTTTCTTGGTCAGGCGCGGTGCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2973:HG4_Ill_Krunchall_5928:HG2_Ill_Krunchall_5712:HG4_PB_HySA_6003:HG3_PB_HySA_6193:HG3_PB_pbsv_3875:HG2_PB_pbsv_3968:HG4_PB_pbsv_4001:HG4_Ill_scalpel_3869:HG4_Ill_manta_981:HG4_Ill_GATKHCSBGrefine_2801:HG4_10X_allpass_727:HG3_Ill_scalpel_4034:HG3_Ill_manta_910:HG3_Ill_GATKHCSBGrefine_2686:HG3_10X_allpass_777:HG2_Ill_scalpel_3943:HG2_Ill_manta_1128:HG2_Ill_GATKHCSBGrefine_2695:HG4_Ill_MetaSV_3591:HG3_Ill_MetaSV_3600:HG2_Ill_tnscope_429:HG2_Ill_MetaSV_3448:HG4_PB_SVrefine2PBcRDovetail_2062:HG4_PB_SVrefine2Falcon1Dovetail_2433:HG4_Ill_SVrefine2DISCOVARDovetail_3099:HG3_PB_SVrefine2PBcRDovetail_1872:HG3_PB_SVrefine2Falcon1Dovetail_2496:HG3_Ill_SVrefine2DISCOVARDovetail_3118:HG2_PB_SVrefine2PBcRplusDovetail_7809:HG2_PB_SVrefine2PB10Xhap12_2927:HG2_PB_SVrefine2Falcon2Bionano_1892:HG2_PB_SVrefine2Falcon1plusDovetail_8414:HG2_Ill_SVrefine2DISCOVARplusDovetail_9125;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2973:HG4_PB_SVrefine2PBcRDovetail_2062:HG4_PB_SVrefine2Falcon1Dovetail_2433:HG4_Ill_SVrefine2DISCOVARDovetail_3099:HG3_PB_SVrefine2PBcRDovetail_1872:HG3_PB_SVrefine2Falcon1Dovetail_2496:HG3_Ill_SVrefine2DISCOVARDovetail_3118:HG2_PB_SVrefine2PBcRplusDovetail_7809:HG2_PB_SVrefine2PB10Xhap12_2927:HG2_PB_SVrefine2Falcon2Bionano_1892:HG2_PB_SVrefine2Falcon1plusDovetail_8414:HG2_Ill_SVrefine2DISCOVARplusDovetail_9125;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0321285;ClusterMaxSizeDiff=0.0321285;ClusterMaxEditDist=0.064257;PBcalls=13;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-252;DistBack=1661;DistForward=-128;DistMin=-128;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=118;REFWIDENED=3:194290223-194290592;PctSeqSimilarity=0.8803;PctSizeSimilarity=0.9722;PctRecOverlap=0.7589;SizeDiff=7;StartDistance=-61;EndDistance=-54;GTMatch=0;TruScore=87;MatchId=2668.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:./.:0:0:0:0:./.:0:0:0:0:0/1:13:8:./.:.:.:.:.:.
chr3	194384074	HG2_PB_SVrefine2Falcon1plusDovetail_8415	ATCAGCAGAAACCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCCTCAGAGAAAGCCTTTCCCTTCTTCCGCC	A	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_3119:HG3_Ill_Krunchall_5615:HG3_Ill_GATKHCSBGrefine_2687:HG4_PB_HySA_6007:HG2_PB_pbsv_3969:HG2_PB_PB10Xdip_20344:HG4_Ill_manta_982:HG4_Ill_GATKHCSBGrefine_2802:HG4_10X_allpass_729:HG2_Ill_SpiralSDKrefine_11794:HG2_Ill_GATKHCSBGrefine_2696:HG2_10X_allpass_628:HG4_PB_pbsv_4003:HG4_Ill_MetaSV_3593:HG3_PB_pbsv_3876:HG2_Ill_tnscope_430:HG2_PB_SVrefine2PB10Xhap12_2929:HG4_PB_SVrefine2PBcRDovetail_2064:HG4_PB_SVrefine2Falcon1Dovetail_2435:HG4_Ill_SVrefine2DISCOVARDovetail_3102:HG2_PB_SVrefine2PBcRplusDovetail_7810:HG2_PB_SVrefine2PB10Xhap12_2928:HG2_PB_SVrefine2Falcon2Bionano_1893:HG2_PB_SVrefine2Falcon1plusDovetail_8415:HG3_PB_SVrefine2PBcRDovetail_1873:HG3_PB_SVrefine2Falcon1Dovetail_2499;NumClusterSVs=26;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8415:HG2_PB_SVrefine2Falcon2Bionano_1893:HG2_PB_SVrefine2PB10Xhap12_2928:HG2_PB_SVrefine2PBcRplusDovetail_7810:HG4_Ill_SVrefine2DISCOVARDovetail_3102:HG4_PB_SVrefine2Falcon1Dovetail_2435:HG4_PB_SVrefine2PBcRDovetail_2064;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0874172;ClusterMaxSizeDiff=0.0874172;ClusterMaxEditDist=0.0874172;PBcalls=14;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-393;DistBack=-447;DistForward=-303;DistMin=-447;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=91;REFWIDENED=3:194384104-194384558;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9975;PctRecOverlap=0.9721;SizeDiff=1;StartDistance=-11;EndDistance=-10;GTMatch=0;TruScore=98;MatchId=2669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:28:0|1:17:2:2:25:./.:0:0:0:0:0/1:31:17:0/1:11:3:.:.:.
chr3	194398682	HG4_Ill_SVrefine2DISCOVARDovetail_3103	CAACTACCTTCTGCATGGACCATTTTCTTCCTCTGGACCGCTCTCTCCTGCCTCTGTCTACGGCAATCTGCCCATCCTTCCATGCTTAGCATGAAGTCCGCTTCCTTCCTAAAGAGGGCCCTGGCCTGGGCACTGTTTGACTACACGTTATTTCTCCTGCAATGGGAAATGGGCTACCAGACTCTCAGAGACCCAAGTGCGAACCTCGTCCAAGGTTCCAAGCAAGCAGCCCATGAAAGGAGAGGCTCCAAGGCAAGGGGCATGGTGAGAACACTTCTGGGAGCTTTGGTCACAGGGTGACCTCCAGAGTTCGTAGACCTCTGACTTGTCTGTTGGTTCTCTCTCACTCCTGCAATTTCCTGTCATGGGCTCTGTTTTGATCTTTTGTCTTTTATATTTATTTATTTATTTATTTTCAGCGCGCTTTGTTGGAAACATGGCTTCTGTTTTGAGTTAATGGTGTCCCTTACAAAGACATGATCAGGCCTGGTGGCTCATGCCTGTATGTAATCCCAGCATTTTGGGAGGCTGAGGTGGGAGGATTACTTGAGCCCAGGAGGTCGAGGTTGTGGTGAGCTATGATAGTGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACCTAACCCCTAGTACTTGTGGATGTGCTTTTATTTGGAAAAAGGTCTTTTTTTTTGAGATGAGGTTTCACTATGTTGTGCAGGCTTGGTCTCAACCTCCTGGGCTCAAATGACCCTTCTGCCTGGGCCTCCTGAATATTGGGATTACAGGCATGAGCCACTCACTGTACCAGGTTTGGAAAAGGGTGTTTGCAGATGTAATCAAGTGAAGATGAACTCATACTGGATTAGACGGGCCCTAATCCAGTAACTACTGTTTTAGAAAGAGAAACATTTGGCTGCATATGCAGAAGACAAAGAAGGAGAGGCCAGAGGCAGAGACTGGAGCAATATGTCTAAAAAACAAGGAACGCCAAGGATGACAGGCAGCCATCAGAAGGCAGTAAGATGCAAGGAAGGATGCTGCCTTCTCCCAACCTCCAAAATTGTGAGGATACATTGTTGTTGTTTTCAGCCACCTCATTTATGGTAATCTGTTATGGCAGCTGCAGGAAATACCTGCAGCTTTCTTGTGATCTTAGAAATGAATGAGGATTTGCTCAGCTCCCCAATAGGCAGAGAAGGGCAGCAGCGTGCTCCGGGACCCTCGGTGAGTCAGGGCTGGAGGGCGGGGGTCTGGATTCCTTCTTGGCCAATCTTGTGTACCTGAGCCTTGGCTCTGATCGTGGCATGTCCCTGCTCTAGCACCTCCAGTGACTCACCACAGCTTATGAGACGCCTCCTCCTGCCATTCAGGGCCATCAGGAGTCAGGCCCTGGCCTGACCCAAACACAAAGAACACAGGCTTTGGAGATCTTGGGCAAATTTCTTAACTCCTCCAAGCTGTGGTCCTTTCCCCCGGAAAAATGAAGAGACTAGCACAGACCTGACAACACTCTTAGGAGCATGAAATGTTTGGACGGATCTGACTCAGCACAGTGTCTGACATGCGGTAGGGGCTCAGTGCTTTTGCATTCCCTCCTTTTGCCCAGTTGTTGGATGTTCAACACT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2974:HG4_PB_pbsv_4004:HG2_10X_allpass_629:HG2_PB_assemblyticsfalcon_18707:HG2_Ill_SpiralSDKrefine_11795:HG2_PB_pbsv_3970:HG2_Ill_MetaSV_3449:HG4_PB_SVrefine2PBcRDovetail_2065:HG4_Ill_SVrefine2DISCOVARDovetail_3103:HG4_Ill_MetaSV_3594:HG4_Ill_GATKHCSBGrefine_2803:HG4_10X_allpass_730:HG2_PB_SVrefine2PB10Xhap12_2930:HG2_PB_SVrefine2Falcon2Bionano_1894:HG2_PB_SVrefine2Falcon1plusDovetail_8416:HG2_Ill_SVrefine2DISCOVARplusDovetail_9126;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2974:HG4_PB_SVrefine2PBcRDovetail_2065:HG4_Ill_SVrefine2DISCOVARDovetail_3103:HG4_Ill_MetaSV_3594:HG4_Ill_GATKHCSBGrefine_2803:HG4_10X_allpass_730:HG2_PB_SVrefine2PB10Xhap12_2930:HG2_PB_SVrefine2Falcon2Bionano_1894:HG2_PB_SVrefine2Falcon1plusDovetail_8416:HG2_Ill_SVrefine2DISCOVARplusDovetail_9126;NumExactMatchSVs=10;ClusterMaxShiftDist=0.265739;ClusterMaxSizeDiff=0.265739;ClusterMaxEditDist=0.265739;PBcalls=7;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1608;DistBack=14242;DistForward=-1596;DistMin=-1596;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=201;REFWIDENED=3:194398683-194400491;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2670.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:48:0|1:33:0:3:34:./.:0:0:0:0:0/1:53:24:0/1:129:46:1635:.:.
chr3	194566115	HG2_PB_SVrefine2Falcon1plusDovetail_8417	GTGATGGTGATGGTGAGTACTGTGAACATAGCCTGGGCTGGAGTTAATGATGATGGTGACGGTGATGGTGATGGTGAGTACTGTGAACATAGCCTGGGCTGGAGTTAATGATGATGATGACGGTGATGGTGAGTTCTGTGAACATAGCCTGGGCTGGAGTTAATGATGAAGATGACGGTGATGGTGAGTACTGTGAACATAGCCTGGGCTGGAGTTAATGATGATGATGACAGTGATGGTGATGGTGAGTTCTGTGAACATAGCCTGGGCTGGAGTTAATGATGATGATGACGGTGATGGTGAGTTCTGTGAACATAGCCTGGGCTGGAGTTCATGATGATGACGGTGATGGTGAGTATTGTGAACATAGCCTGGGCTGGAGTTAATGATGAAGGTGACGGTGATGGTGAGTATTGTGACCATAGCCTGGGCTGGAGTTAATGATGATGGTGACAGTGATGGTGATGGTGAGTACTGTGAACATAGCCTGGGCTGGAGTTAATGA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7812:HG2_PB_pbsv_3972:HG4_PB_assemblyticsfalcon_18304:HG4_PB_SVrefine2Falcon1Dovetail_2436:HG3_PB_pbsv_3878:HG3_PB_SVrefine2PBcRDovetail_1874:HG3_PB_SVrefine2Falcon1Dovetail_2500:HG2_PB_SVrefine2PB10Xhap12_2931:HG2_PB_SVrefine2Falcon2Bionano_1895:HG2_PB_SVrefine2Falcon1plusDovetail_8417;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8417:HG2_PB_SVrefine2Falcon2Bionano_1895:HG2_PB_SVrefine2PB10Xhap12_2931:HG3_PB_SVrefine2Falcon1Dovetail_2500:HG3_PB_SVrefine2PBcRDovetail_1874;NumExactMatchSVs=5;ClusterMaxShiftDist=0.102941;ClusterMaxSizeDiff=0.101977;ClusterMaxEditDist=0.222689;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-504;DistBack=746;DistForward=-501;DistMin=-501;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=815;REFWIDENED=3:194566116-194567434;PctSeqSimilarity=0.9424;PctSizeSimilarity=0.9881;PctRecOverlap=0.7208;SizeDiff=6;StartDistance=-141;EndDistance=-135;GTMatch=0;TruScore=88;MatchId=2671.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:37:0|1:27:1:3:32:./.:0:0:0:0:0/0:35:0:0/1:31:6:.:.:.
chr3	195340211	HG2_Ill_150bpfermikitraw_5193	TGCCATGTTGGTCAGGCTGGTGTCGAACTCCTGGCCTCAAGTGATCCCCCACTTTGGCCTCCCGAAGTGCTGGGATTACAGGCATGAGCCACCACACCTGGCTAGTTTTTGTATTTTTAGTAGAGATGGGGTTTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_3886:HG4_Ill_Krunchall_5950:HG2_Ill_Krunchall_5726:HG4_PB_pbsv_4016:HG2_PB_pbsv_3979:HG4_PB_SVrefine2PBcRDovetail_2071:HG4_Ill_GATKHCSBGrefine_2811:HG3_PB_SVrefine2Falcon1Dovetail_2506:HG3_Ill_GATKHCSBGrefine_2693:HG2_PB_SVrefine2PBcRplusDovetail_7816:HG2_PB_SVrefine2PB10Xhap12_2939:HG2_PB_SVrefine2Falcon2Bionano_1900:HG2_PB_SVrefine2Falcon1plusDovetail_8423:HG2_Ill_SpiralSDKrefine_11803:HG2_Ill_SVrefine2DISCOVARplusDovetail_9135:HG2_Ill_GATKHCSBGrefine_2703:HG2_Ill_250bpfermikitraw_5612:HG2_Ill_150bpfermikitraw_5193:HG2_10X_SVrefine210Xhap12_2980;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2980:HG2_Ill_150bpfermikitraw_5193:HG2_Ill_250bpfermikitraw_5612:HG2_Ill_GATKHCSBGrefine_2703:HG2_Ill_SVrefine2DISCOVARplusDovetail_9135:HG2_Ill_SpiralSDKrefine_11803:HG2_PB_SVrefine2Falcon1plusDovetail_8423:HG2_PB_SVrefine2Falcon2Bionano_1900:HG2_PB_SVrefine2PB10Xhap12_2939:HG2_PB_SVrefine2PBcRplusDovetail_7816:HG3_Ill_GATKHCSBGrefine_2693:HG3_PB_SVrefine2Falcon1Dovetail_2506:HG4_Ill_GATKHCSBGrefine_2811:HG4_PB_SVrefine2PBcRDovetail_2071;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0225564;ClusterMaxSizeDiff=0.0224719;ClusterMaxEditDist=0.0451128;PBcalls=9;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-134;DistBack=43553;DistForward=1624;DistMin=1624;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=181;REFWIDENED=3:195340133-195340447;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:43:1/1:6:32:0:8:./.:0:0:0:0:1/1:0:50:./.:.:.:.:.:.
chr3	195451991	HG2_PB_SVrefine2Falcon2Bionano_1905	TCCTCAGAGAGCAGCGCCTCTTCCGACAGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8437:HG4_PB_SVrefine2PBcRDovetail_2073:HG3_PB_SVrefine2PBcRDovetail_1881:HG2_PB_SVrefine2Falcon1plusDovetail_8439:HG2_PB_SVrefine2Falcon1plusDovetail_8438:HG2_10X_allpass_631:HG4_10X_allpass_733:HG3_PB_SVrefine2Falcon1Dovetail_2528:HG2_PB_pbsv_3989:HG4_Ill_MetaSV_3601:HG4_Ill_GATKHCSBGrefine_2815:HG3_10X_allpass_778:HG2_PB_SVrefine2PBcRplusDovetail_7825:HG4_PB_pbsv_4027:HG2_PB_SVrefine2PB10Xhap12_2948:HG3_PB_pbsv_3897:HG4_PB_SVrefine2Falcon1Dovetail_2456:HG3_PB_SVrefine2Falcon1Dovetail_2527:HG2_PB_SVrefine2Falcon2Bionano_1905;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1905:HG3_PB_SVrefine2Falcon1Dovetail_2527:HG4_PB_SVrefine2Falcon1Dovetail_2456;NumExactMatchSVs=3;ClusterMaxShiftDist=0.352214;ClusterMaxSizeDiff=0.352214;ClusterMaxEditDist=0.352214;PBcalls=14;Illcalls=2;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-456;DistBack=7961;DistForward=-445;DistMin=-445;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=224;REFWIDENED=3:195451992-195452671;PctSeqSimilarity=0.9413;PctSizeSimilarity=0.8889;PctRecOverlap=0.8891;SizeDiff=-57;StartDistance=0;EndDistance=-57;GTMatch=1;TruScore=90;MatchId=2674.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:1:20:3:39:./.:0:0:0:0:./.:0:6:0/1:5:12:.:.:.
chr3	195564735	HG4_PB_SVrefine2Falcon1Dovetail_2461	AGGACATGGGAGCCGGAGGCGGCACGAGAGCGTCACCCGCACCAAAGGATTCTCGGGGTCTCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_2983:HG3_PB_assemblyticsfalcon_18664:HG3_PB_pbsv_3908:HG2_PB_pbsv_4004:HG4_PB_pbsv_4041:HG4_Ill_GATKHCSBGrefine_2817:HG4_Ill_250bpfermikitraw_5704:HG3_Ill_GATKHCSBGrefine_2698:HG3_Ill_250bpfermikitraw_5445:HG3_Ill_150bpfermikitraw_5276:HG2_Ill_SpiralSDKrefine_11811:HG2_Ill_GATKHCSBGrefine_2708:HG2_Ill_250bpfermikitraw_5627:HG2_Ill_150bpfermikitraw_5208:HG2_PB_assemblyticsfalcon_18755:HG4_PB_SVrefine2PBcRDovetail_2075:HG4_PB_SVrefine2Falcon1Dovetail_2461:HG3_PB_SVrefine2PBcRDovetail_1884:HG3_Ill_SVrefine2DISCOVARDovetail_3126:HG2_PB_SVrefine2PBcRplusDovetail_7833:HG2_PB_SVrefine2PB10Xhap12_2958:HG2_PB_SVrefine2Falcon2Bionano_1912:HG2_PB_SVrefine2Falcon1plusDovetail_8451:HG2_Ill_SVrefine2DISCOVARplusDovetail_9138;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_2983:HG4_PB_SVrefine2PBcRDovetail_2075:HG4_PB_SVrefine2Falcon1Dovetail_2461:HG3_PB_SVrefine2PBcRDovetail_1884:HG3_Ill_SVrefine2DISCOVARDovetail_3126:HG2_PB_SVrefine2PBcRplusDovetail_7833:HG2_PB_SVrefine2PB10Xhap12_2958:HG2_PB_SVrefine2Falcon2Bionano_1912:HG2_PB_SVrefine2Falcon1plusDovetail_8451:HG2_Ill_SVrefine2DISCOVARplusDovetail_9138;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0322581;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.0806452;PBcalls=12;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=1899;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=189;REFWIDENED=3:195564736-195564986;PctSeqSimilarity=0.9844;PctSizeSimilarity=1;PctRecOverlap=0.2698;SizeDiff=0;StartDistance=-46;EndDistance=-46;GTMatch=0;TruScore=75;MatchId=2675.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:56:1/1:5:29:1:18:./.:0:0:0:0:0/1:21:15:./.:.:.:.:.:.
chr3	195569216	HG2_PB_assemblyticsfalcon_18757	GGTGAAACCCCGTCTCTACTAAAAATACAAAAATCAGCCGGGCGTGGTGGCGGGCGCCTGTAATCCCAACTACTCAGGAGACTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAAAGGTTGCAGGGAGCCGAGATCAAGCCATCGCACTCCAGCTTGGGTGGCAAGAGCAAGACTCTGTCTAAAAAAAAAAGAATCATGCCATGTATTTTAATGTATTTTTTTTTACCACTTTTGAGAGTTAAATAGCTATTTTTCCTGTGCGTGTGTGTGTGTGTTCTCATAGTGAATTGTCTAAACAAGTCCATCCAGTTAGGATCTTAGTATTTTTCTTATCAATCTAGGTGAGTGTTTTCATTAAATACTGATACTGATAGGGACACTTTTGTCAGATTTGTTGCAAATATTTTCCTTTCCCTATAATTTGTTCCTTTTCTTTTTTTTTTTTTTTTTTAATGAAGTCTCGCTCTGTCCCCCAGGCTGCAGTGCAGTGACATGATCTCTGCTCACTGCAACCTCACCTCCCTGGTTCAAGCGATTTTCCTGCCTCAGCCCCCCAAGCAGCTGGGACTACAGACGCCTGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGGGACGGGGTTTCATCATGTTGGGCAGGCTGGTCTCGAACTCCTGACCTCAGGTCATCCGCCTGCCTCGGCCTCTCAAAGTGCTGGGATTACAGGCGTGA	G	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3602:HG2_PB_HySA_7597:HG4_PB_pbsv_4042:HG4_PB_SVrefine2PBcRDovetail_2076:HG4_Ill_manta_989:HG4_Ill_SVrefine2DISCOVARDovetail_3110:HG3_PB_assemblyticsfalcon_18666:HG3_PB_SVrefine2Falcon1Dovetail_2532:HG2_PB_assemblyticsfalcon_18757:HG2_PB_SVrefine2PB10Xhap12_2959:HG2_PB_SVrefine2Falcon1plusDovetail_8452:HG2_Ill_MetaSV_3454:HG2_Ill_GATKHCSBGrefine_2709:HG2_10X_allpass_632:HG4_10X_allpass_734:HG4_Ill_Spiral_338:HG2_Ill_tnscope_433:HG2_Ill_Spiral_289:HG2_PB_pbsv_4006:HG4_Ill_Krunchall_5966:HG2_Ill_Krunchall_5744;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_632:HG2_Ill_GATKHCSBGrefine_2709:HG2_Ill_MetaSV_3454:HG2_PB_SVrefine2Falcon1plusDovetail_8452:HG2_PB_SVrefine2PB10Xhap12_2959:HG2_PB_assemblyticsfalcon_18757:HG3_PB_SVrefine2Falcon1Dovetail_2532:HG3_PB_assemblyticsfalcon_18666:HG4_Ill_SVrefine2DISCOVARDovetail_3110:HG4_Ill_manta_989:HG4_PB_SVrefine2PBcRDovetail_2076;NumExactMatchSVs=11;ClusterMaxShiftDist=0.164736;ClusterMaxSizeDiff=0.164736;ClusterMaxEditDist=0.164736;PBcalls=9;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-716;DistBack=1966;DistForward=-716;DistMin=-716;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=3:195569217-195569933;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2676.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:22:./.:31:1:7:15:./.:0:0:0:0:0/1:36:9:0/1:61:16:.:.:.
chr3	195872266	HG4_PB_SVrefine2Falcon1Dovetail_2466	TGACTGACAGGCGCACACCACCACGCCTGGCTCTGACTGACAGGCGCACACCACCACGCCTGGCTCTGACTGACAGGCGCACACCACCACGCCTGGCTCTGA	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1921:HG4_PB_assemblyticsfalcon_18356:HG4_PB_SVrefine2Falcon1Dovetail_2466:HG4_PB_pbsv_4056:HG2_PB_pbsv_4020;NumClusterSVs=5;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_2466:HG4_PB_assemblyticsfalcon_18356;NumExactMatchSVs=2;ClusterMaxShiftDist=0.04;ClusterMaxSizeDiff=0.04;ClusterMaxEditDist=0.151515;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-101;DistBack=140;DistForward=-57;DistMin=-57;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=361;REFWIDENED=3:195872042-195872503;PctSeqSimilarity=0.9752;PctSizeSimilarity=0.9901;PctRecOverlap=0.902;SizeDiff=1;StartDistance=9;EndDistance=10;GTMatch=0;TruScore=95;MatchId=2678.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:25:./.:7:20:18:3:./.:0:0:0:0:./.:15:1:./.:.:.:.:.:.
chr3	196061653	HG2_PB_SVrefine2PBcRplusDovetail_7845	GGGGAGGGGTGCCCTGGGAGGGTGGGGGTAGGAGAGAGGAAGGGTGCCCTGAGAAGGTGGGGGTTAGGAGAAGGGAGGGGTGCACTGGGAGGGTGGGTGTAGGAGAGGGAAGGGTGCCCTGAGAAGGTGGGGGTTAGGAGAAGGGAGGGGTGCACTGGGAGGGTGGGTGTAGGAGAGGGAAGGGTGCCCTGAGAAGGTGGGGGTTAGGAGAA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8462:HG2_PB_pbsv_4024:HG3_PB_pbsv_3923:HG2_PB_SVrefine2PBcRplusDovetail_7845:HG2_PB_SVrefine2Falcon2Bionano_1925;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8462:HG2_PB_SVrefine2PBcRplusDovetail_7845:HG2_PB_SVrefine2Falcon2Bionano_1925;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00950119;ClusterMaxSizeDiff=0.00947867;ClusterMaxEditDist=0.0236407;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-211;DistBack=-142;DistForward=-73;DistMin=-142;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=152;REFWIDENED=3:196061654-196062016;PctSeqSimilarity=0.9745;PctSizeSimilarity=1;PctRecOverlap=0.5425;SizeDiff=0;StartDistance=-97;EndDistance=-97;GTMatch=0;TruScore=83;MatchId=2679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:21:0|1:19:1:1:19:./.:0:0:0:0:0/0:16:0:./.:.:.:.:.:.
chr3	196390101	HG2_Ill_svaba_5131	GGCCATCTCAGGCCCCACATTCAGTAGCGTTAGCGGCAGGTCCTGTTAGGCTTT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_4030:HG4_Ill_Spiral_339:HG3_Ill_Spiral_4439:HG2_Ill_Spiral_290:HG4_PB_pbsv_4064:HG3_PB_pbsv_3925:HG4_Ill_svaba_5248:HG4_Ill_manta_992:HG4_Ill_Krunchall_5975:HG4_Ill_GATKHC_6835:HG4_Ill_GATKHCSBGrefine_2830:HG4_Ill_250bpfermikitraw_5715:HG4_Ill_150bpfermikitraw_5443:HG3_Ill_svaba_5214:HG3_Ill_manta_915:HG3_Ill_Krunchall_5655:HG3_Ill_GATKHCSBGrefine_2705:HG3_Ill_250bpfermikitraw_5463:HG2_Ill_svaba_5131:HG2_Ill_Krunchall_5758:HG2_Ill_GATKHCSBGrefine_2714:HG2_Ill_250bpfermikitraw_5639;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5639:HG2_Ill_GATKHCSBGrefine_2714:HG2_Ill_Krunchall_5758:HG2_Ill_svaba_5131:HG3_Ill_250bpfermikitraw_5463:HG3_Ill_GATKHCSBGrefine_2705:HG3_Ill_Krunchall_5655:HG3_Ill_manta_915:HG3_Ill_svaba_5214:HG4_Ill_150bpfermikitraw_5443:HG4_Ill_250bpfermikitraw_5715:HG4_Ill_GATKHCSBGrefine_2830:HG4_Ill_GATKHC_6835:HG4_Ill_Krunchall_5975:HG4_Ill_manta_992:HG4_Ill_svaba_5248;NumExactMatchSVs=16;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0377358;PBcalls=3;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-53;DistBack=1023;DistForward=-9;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=56;REFWIDENED=3:196390102-196390210;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2680.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:13:0|1:23:1:2:11:./.:0:0:0:0:0/1:40:18:./.:.:.:.:.:.
chr3	196757105	HG2_PB_SVrefine2PBcRplusDovetail_7849	AGCTGCACAGAGGATCTGGGATACGGGGGAGCCCAGGCCGAGCGCCCTGGCGAGGGGGGAGCCGGGCAGGGGCATCTCGGCCACAGCTGCACAGAGGATCTGGGATACGGGGGAGCCCAGGCCGAGCGCCCTGGCGAGGGGGGAGCCGGGCAGGGGCATCTCGGCCACA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2979:HG3_PB_SVrefine2Falcon1Dovetail_2543:HG4_Ill_SVrefine2DISCOVARDovetail_3127:HG3_Ill_SVrefine2DISCOVARDovetail_3137:HG2_PB_SVrefine2PBcRplusDovetail_7849:HG2_PB_SVrefine2PB10Xhap12_2980:HG2_PB_SVrefine2Falcon2Bionano_1929:HG2_PB_SVrefine2Falcon1plusDovetail_8465:HG2_Ill_SVrefine2DISCOVARplusDovetail_9154:HG2_Ill_GATKHC_6717:HG4_PB_HySA_6066:HG4_PB_pbsv_4068:HG3_PB_pbsv_3931:HG2_PB_pbsv_4035:HG4_PB_SVrefine2PBcRDovetail_2087:HG4_PB_SVrefine2Falcon1Dovetail_2472;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9154:HG2_PB_SVrefine2Falcon1plusDovetail_8465:HG2_PB_SVrefine2Falcon2Bionano_1929:HG2_PB_SVrefine2PB10Xhap12_2980:HG2_PB_SVrefine2PBcRplusDovetail_7849:HG3_Ill_SVrefine2DISCOVARDovetail_3137:HG4_Ill_SVrefine2DISCOVARDovetail_3127;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0301205;ClusterMaxSizeDiff=0.03003;ClusterMaxEditDist=0.0361446;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-168;DistBack=24345;DistForward=-89;DistMin=-89;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=169;REFWIDENED=3:196757018-196757354;PctSeqSimilarity=0.997;PctSizeSimilarity=0.994;PctRecOverlap=0.9941;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2682.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:./.:23:7:8:18:./.:0:0:0:0:0/1:16:19:./.:.:.:.:.:.
chr3	196859628	HG3_Ill_SVrefine2DISCOVARDovetail_3138	CATACTGCTGAAATACACATTAAATAGCTGTGGCATACTGCTGAAATACACATTAAATAGCTGTGGCATACTGCTGAAATACACATTAAATAGCTGTGGT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7851:HG3_PB_SVrefine2PBcRDovetail_1897:HG3_Ill_SVrefine2DISCOVARDovetail_3138:HG2_PB_SVrefine2Falcon2Bionano_1931:HG2_PB_pbsv_4038:HG3_PB_pbsv_3933;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1931:HG3_Ill_SVrefine2DISCOVARDovetail_3138:HG3_PB_SVrefine2PBcRDovetail_1897;NumExactMatchSVs=3;ClusterMaxShiftDist=0.010101;ClusterMaxSizeDiff=0.0100503;ClusterMaxEditDist=0.030303;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-99;DistBack=-216;DistForward=-28;DistMin=-216;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=395;REFWIDENED=3:196859438-196859931;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2683.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:39:0|1:34:1:3:30:./.:0:0:0:0:./.:2:3:./.:.:.:.:.:.
chr3	196934574	HG2_PB_SVrefine2PB10Xhap12_2982	TATAAATAGAAATTTGGTACTATTTTTAATAAAGTTTATATCTTCAACCAATATCATTGGTTAAAAGATTATTCAATAAATAGCAAGGGGGAAAATGGGTAGCTACAACAAAAATATCCTGAAGATTTTTTTAAATGAGACTATAACACAAGATTCTTCTAGAGAAATTCTTTTATAACTATAACAAAGACCTATATAGCTGTAACATAATACTGAGAAGCCATTAAAAAAAGACTGATAAATTTGACTAGAAGTCAAAACGTTAAAAAATACGAAAAAAAATTGTAACTTAAATCCAAAGGACTAATTTCACAAACACATTTAAAAACTTCTTAGTCCCTAAGAAAAAGATACAAAACCCTCCAGCCCTCTCTCTAATGCATGGAACAAGAACAAGCAAACAATTTAGAGAAAAAAAAAAATCAAGTAATTCTTACATATACAAAAATATGTTTATCTACTACTCCCAAGAGGATAAATGTAAATTAAAGCTACGCTGATATACTACTTCTCACATTATCAGATTGTCAAATATCCAAGTTTGATAACATACTATATACTGATGAGGACATAGGAAAAACAGGCACTTTCATACGAATCTGTGGAGTGTACACTGGTACTACCTCTATAAAAGGACAATTTCACAACTTCTATCAAAATTATGAATACATAGAACCTCTGACCTGATAATTCTACTTTTAGGAATTTATCCTATAGAAATATTGCCATGTTTACAATCGAAGTGTGTAGGCAGTTATTTATTGTAGTATTGTTTGTAAAACAAATAATTAAAAACATCCATCACTATATCCAGTAACAATGAACTTGTCAAATAAATCATTCTTATTCAAATAAGAGAATATCACAAGTCATAAAATGATGAGAAAGGTCTTCAGGTATGGAAATAGAAAAAACTCCAGAATATAATGTTAAGTGGTGAAAACAAGTCCAGAATAGTATAGACTACACTCCTGTGTGTGTGGCGGGGTGGGGGTAGTTGGGGGGATAGTAAGAGGAAGAGAAAATACACATATTTGCTTATATACGGAGAAACCAGGATGCATAGGAAACAGATAACTTTAGTTGCTTGACGAGAGGAGATTTACCCCTGGGGGAAAGAGGCAAGAGGGAGACCTTTTCATCTTCATACAGCTTTTAAATTTCAAGCCATGTGAATGTATTATTCATTCACAAAATTACCTTTAGAATGAAAAAAATTTTAATGAGTTGATAAAACAATCATTACAGGAGATACTGGTACACAGCTAGAAAATCCAAGCAAATCCACTAAAAAAATTACTAGAAGTAATTTAGTATGTTAACTGATTTTAATTAATAATTAGTAAAAATCAGATTTCTCATATTTAAAAGGCAAATTAAAACAAATATGACTTGGGCCACCACTAAATGATGTTGAGAATCTGAGCATGAATCTTACTTCATGCAAAGCGAGAGATATACTTCGTAAAAAAAGGCAGAGTGAAAGCATATGAATGAAAAGAAAAGGTATATAAACTGTAAGCATAAGAAAGCTAAAGTGCCTATATTAACATATGATAAAACAGACTTCAAGACAGAGTATTTATCTAAAGAAAAAGAGATTTCAAAATGCTAAAAATTTAATTCACCAGGAAGTTATAAGAACCATAAATGTGTGTACTTAATAACAGGGCCTTAAAATACATAAGCAAAACCAACAGAAACTAAAGGGAGAAACAGACAATTCTACAATTTTAGTAAGAGATTTAAACTCCTTGATTAGCAACTGATAGAACTATACAAATATAAGACAAATTGAACAAAGTATCAACTGTCTTGACCTAATTAACATTTATGATAAACAACACTTAACAACTGAAGAAAATACATCACCTTCTGTGAATATGGTACATTTGCCAATACAGACCATATGCTAGGCCACAAAACAAGTCACAAATTTAAAAGGATTGAAATCACAACCAATCCATTCTCTAACCACAATGGAATTAACTGAGAAACAAGGTATCTAGTAAAATTCCTAATATTTGAACATTAAACAACACACTTCTAAAAATCTCATGGTTCAAAGAACTCAAGAAGGAAATCAGAAACAATTCAGAATGGAGTAATAATGAAGCTAAATAGGACTATGTAGTAAAGAATTTAACCTTGCTTTTAGCTCCCTCCAAACCCTTGGAATGTCCTGATTGAATTTCCCTGGTTGGAATACTCAGTGCTTATTGTCACACATTGTTACCAGAAGGGTTAACATCATCCATGACTCCAGAGAAGACAAATGGAAACTCCTCATTTGGAAATTTTCTGGACTTTTATCTCTCCCATGGCTGATTTTAATCTGTATCCTTTCAAGTAATAAACCATAACTGTGAGTATAATAGCTTTCAGTGAGTTCTGTGAGTCCTTCCAGTAAATTACTGAACCTGAGGGTTCTGAACTATTAACAAACTTTACAAGTACTTAAAAGGAAATCTGTAGCTTTAACTGCTTACATTAAAAATGAAAGTTTAAAATCACTGACCTAAGGATCCACCTTGAGAAGCTATAAAAAAAAAAAAAGACTAAGTAAAGTAAACCTGAGGGGAAGAGAAGGAAGGAAATAATAAAAGGCAGAAATCAATGAAACAGAAAACAAAGAATTGAGTATATTAACAAAGCCAAATAATCATAAAAACAGATAAACCCTATTCTAGACAGATCAAGGAAAGAGAGAATATAATTACCAATAATAAAAAATGCAAGAGAGGTTATCACTGAAAAAACCTATAGATCTTATAAAGATAATAAAAGATAATTATAAAAAACTTTAGGCAAACTAATCCAATAGGTTAGATGAAATCAAGAAATTCCCCAAAAAACACATCTTACCACACACCATATTCTGACACAATATAAAACAGTAAATGTGAGTGGCCTCTCAAATTTATATATATATATATAAGTCTTTATAAGAAATATATTTTCTTTAATATATATTAAAGAATTCAATCTGTTACCAAAATTCTTCCCACTGAGAAAACTCCAGGCCCAAATACACTAAATTCTACCAAGCATTTAAGAAAGAAACAATATCAATTTTACATAATTCTTTCAATAAATAGAGTGAACATCTCCCAACTATGAGATCAGCATAACCTTAATACCAAAACCTGACAAAGACATTACGAAAAAAGAAAATGACACAAATATCCTTCATGAACACAAATGCAAGAATCCTTTTTAAAATACAGCAAATTGAATATGAAAAGGATGCTGTAAAGGATAATACATCATGACCAAATATGATTTATTTCAACAAGGCAAGGTTAGTTTAACATCTAAAAAATAAATTAATGTAATTCTCTATATTTAACAGAATGAAGGAGAAAAATTATATAATTATTTCAACAGACATATAAAATATGTGATCCAATTGAATACCAATTCATAAAACTCTCAGCAAACTAAAAATCCAGAGGAACGATCTAAATCTGATAAAGGGCATTTATGAAAACCCTACAGCTAACAGATGCACAAAGAAGAGCTGGTACCATTTCTACCGAAACTATTCCAAAAAAATTAAAGAGGCTGAACTCCTCTCCAACTCATTCTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGACACAACAAAAAAAGAAAACTTCAGGCCCATATCTTGATGAACATTGATGCAAAAATCCTCAACAAAATACTTAAAAACTGAATCCTGTAGCACATTAAAAAGCTAAACCGCCACAATCAAGTAGGCTTCATCCCGGGATGCAAGGCTGGTTCAATACACGCCAATCAATAAATGTGATTCATCACATAAACAGAACTAAATAAATGCAAATCAAACACACAATGAGATACCATCTCCCACCTGTCAGAGTGGTTATTATTAAAAAGTCAAAAAAACAGATGCTGGTGAGGTTATGGAGAAAAGGGAATACTTATACACTGTTGTTGGGAGTACAAATGGGTTCAACCATTGTAGAAAGTAGTATGGTGATTCCTCGAAGAGCTAAAAGCAGAACTACCATTTGACCCAGCAATCCCATTACTGGTTATATACCTAGAGGAATATAAATCATTCTACCACAAAGACACATGTGCACAAACGTTCACTGCAGCACTACTCACAATAGCAAAGACATGGACATCAATGACAGACTGGCTAAAAAAAATGTGGTACATATACACCATGGGATACCATGCAGCCCTGAAAAAGAACACGATCATGTCTTTTGAGGGAAGATGGATGTTGCTAGAGGCTATTATCCTTAGCAAACTAACACAGGAACAGAAAACCAAATACTGAATGTTCTCACTTATAAGTGGGAACTAAACGATGAGAACTGATGAACACAAGAGAACAACAGACACTGGGATCTACTTGAGGGTGGAGAGTGGGAGGAGGGAGAGGAGCAGAAAAGGTAACTACTGGGTACTGGGCTTAATACTTGGGTGATGTAATAATCTGTTCACCTATGTAACAAAGCTTCACGTGTACCCCTGAACCTAAAAGTTTTAAAAAACAAACAAAAAACCCTACCGCTAATGCACACAATGGTGATATGTTCAACATTAAGATGGAGGAAAGGATGCTTACTTGCCTCACTTGTTTTCAACATTATGCTGGAGGCCCTAATTGTGGCTGGAAGGCAGGCAAAAGAAAGTAAAAGTGTAACAGCCAG	CAGACT	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_18691:HG3_PB_pbsv_3935:HG2_PB_pbsv_4039:HG3_PB_SVrefine2PBcRDovetail_1898:HG2_PB_assemblyticsPBcR_18176:HG2_PB_SVrefine2PBcRplusDovetail_7852:HG2_PB_SVrefine2PB10Xhap12_2982:HG2_PB_SVrefine2Falcon2Bionano_1932:HG2_10X_SVrefine210Xhap12_3002:HG2_Ill_tnscope_436:HG2_Ill_SpiralSDKrefine_11829:HG3_Ill_MetaSV_3616:HG2_Ill_MetaSV_3457:HG3_Ill_Krunchall_5660:HG2_Ill_Krunchall_5764:HG3_PB_SVrefine2Falcon1Dovetail_2545;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3002:HG2_PB_SVrefine2Falcon2Bionano_1932:HG2_PB_SVrefine2PB10Xhap12_2982:HG2_PB_SVrefine2PBcRplusDovetail_7852:HG2_PB_assemblyticsPBcR_18176:HG3_PB_SVrefine2PBcRDovetail_1898;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0017094;ClusterMaxSizeDiff=0.0017094;ClusterMaxEditDist=0.0021363;PBcalls=9;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-4676;DistBack=-1561;DistForward=-3113;DistMin=-3113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:196934574-196939255;PctSeqSimilarity=0.973;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=-3;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=99;MatchId=2684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:57:0|1:44:1:2:26:./.:0:0:0:0:0/1:69:20:0/1:368:185:.:.:.
chr3	197303814	HG2_Ill_250bpfermikitraw_5650	AGGAACTACTCCTCCAGCGTGGGGAGGGTCATGTAAATTAGGCAAAGCCATGGAGCTCTGGGATGGGGAG	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2553:HG2_PB_pbsv_4046:HG2_PB_HySA_7642:HG4_PB_assemblyticsfalcon_18389:HG3_PB_HySA_6254:HG3_PB_pbsv_3943:HG3_Ill_svaba_5226:HG3_Ill_scalpel_4069:HG3_Ill_Krunchall_5665:HG3_Ill_GATKHC_6756:HG3_Ill_Cortex_2561:HG3_Ill_250bpfermikitraw_5471:HG2_PB_assemblyticsfalcon_18795:HG2_Ill_svaba_5140:HG2_Ill_SpiralSDKrefine_11834:HG2_Ill_Krunchall_5769:HG2_Ill_GATKHC_6728:HG2_Ill_Cortex_6006:HG2_Ill_250bpfermikitraw_5650:HG2_Ill_150bpfermikitraw_5228:HG3_PB_SVrefine2PBcRDovetail_1900;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5228:HG2_Ill_250bpfermikitraw_5650:HG2_Ill_Cortex_6006:HG2_Ill_GATKHC_6728:HG2_Ill_Krunchall_5769:HG2_Ill_SpiralSDKrefine_11834:HG2_Ill_svaba_5140:HG2_PB_assemblyticsfalcon_18795:HG3_Ill_250bpfermikitraw_5471:HG3_Ill_Cortex_2561:HG3_Ill_GATKHC_6756:HG3_Ill_Krunchall_5665:HG3_Ill_scalpel_4069:HG3_Ill_svaba_5226;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0285714;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.228571;PBcalls=8;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-69;DistBack=9187;DistForward=25;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=126;REFWIDENED=3:197303784-197303978;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:./.:27:13:3:15:./.:0:0:0:0:0/1:32:23:./.:.:.:.:.:.
chr3	197316814	HG3_Ill_scalpel_4070	AAATATATATATATATAAAAATATATATATATATATATAAAAAAATATATATATATATATAAATATATATATATATAT	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_18704:HG2_PB_HySA_7649:HG3_Ill_GATKHC_6758:HG3_Ill_GATKHCSBGrefine_2709:HG2_Ill_GATKHC_6730:HG2_Ill_GATKHCSBGrefine_2719:HG2_10X_allpass_633:HG4_Ill_GATKHC_6845:HG4_Ill_GATKHCSBGrefine_2832:HG3_Ill_GATKHC_6757:HG3_Ill_GATKHCSBGrefine_2708:HG2_Ill_GATKHC_6729:HG2_Ill_GATKHCSBGrefine_2718:HG4_PB_assemblyticsfalcon_18393:HG3_PB_HySA_6255:HG4_Ill_svaba_5256:HG4_Ill_scalpel_3915:HG4_Ill_Krunchall_5985:HG4_Ill_250bpfermikitraw_5725:HG4_Ill_150bpfermikitraw_5450:HG4_10X_allpass_738:HG3_Ill_svaba_5228:HG3_Ill_scalpel_4070:HG3_Ill_Krunchall_5667:HG3_Ill_250bpfermikitraw_5473:HG3_Ill_150bpfermikitraw_5299:HG3_10X_allpass_785:HG2_Ill_svaba_5142:HG2_Ill_scalpel_3987:HG2_Ill_Krunchall_5771:HG2_Ill_250bpfermikitraw_5652:HG2_Ill_150bpfermikitraw_5230:HG4_Ill_manta_996:HG3_Ill_manta_917:HG2_Ill_manta_1141:HG3_PB_pbsv_3945:HG3_Ill_svaba_5227:HG3_Ill_Krunchall_5666:HG3_Ill_250bpfermikitraw_5472:HG3_Ill_150bpfermikitraw_5298:HG2_Ill_svaba_5141:HG2_Ill_Krunchall_5770:HG2_Ill_250bpfermikitraw_5651:HG2_Ill_150bpfermikitraw_5229:HG2_PB_assemblyticsfalcon_18797:HG2_PB_pbsv_4048:HG4_PB_pbsv_4074:HG2_PB_assemblyticsPBcR_18184:HG4_PB_assemblyticsfalcon_18392;NumClusterSVs=49;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5230:HG2_Ill_250bpfermikitraw_5652:HG2_Ill_Krunchall_5771:HG2_Ill_scalpel_3987:HG2_Ill_svaba_5142:HG3_10X_allpass_785:HG3_Ill_150bpfermikitraw_5299:HG3_Ill_250bpfermikitraw_5473:HG3_Ill_Krunchall_5667:HG3_Ill_scalpel_4070:HG3_Ill_svaba_5228:HG4_10X_allpass_738:HG4_Ill_150bpfermikitraw_5450:HG4_Ill_250bpfermikitraw_5725:HG4_Ill_Krunchall_5985:HG4_Ill_scalpel_3915:HG4_Ill_svaba_5256;NumExactMatchSVs=17;ClusterMaxShiftDist=0.20979;ClusterMaxSizeDiff=0.20979;ClusterMaxEditDist=0.20979;PBcalls=10;Illcalls=36;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=18;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-77;DistBack=7838;DistForward=2583;DistMin=2583;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=29;REFWIDENED=3:197316799-197316904;PctSeqSimilarity=0.985;PctSizeSimilarity=0.987;PctRecOverlap=0.7949;SizeDiff=1;StartDistance=15;EndDistance=16;GTMatch=1;TruScore=92;MatchId=2687.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:61:1/1:1:22:3:26:./.:0:0:0:0:1/1:1:36:./.:.:.:.:.:.
chr4	64513	HG4_Ill_Krunchall_5993	TGTTTCATTTAAAGATGCAGTTTTCAAGAACCTATTTTGAACATTAAGTGAGAACTTACCATACATCTGTGTTTGAGTGATATGGGGTCTGCCTTTGATGGTTGTATTACCAGAGATTTGGACAGTCATGGATTCTTTCTGGGCCATGGAAAGATTAAATATCCTTGAGGACATTAATCTATATGGCAGGCAGTAGGGTAGGGTTTTACAGTTTGTCTGCATATGATGGCCCAAATACCATGTGTATGAATGGGATTGGCTTCTACTAACTACCTGGGAACAGGTTTCACAAGTCTCCATGTGGGTCCCTGAGTGTGTACAACTGGCCATGGACTGTGGCTGTGAGAGCTAGAACTGAGTCACAGGGCTGCTTCAAGGAGCACAGTTGAGGCCAAGATCTGCAGGCCTGCCTCCAGGGCCATGGCTGGGTGTGTTTCCCTGCAGGTCACTTGATGGGAAGGACCACTTTTGGACTATAGCTGAAGGAGTTTGAGAGAGGTTGCAGAACTGCTTTGTAATCTTCAGTAAGACCAAGCTCGGTGCCCCATTTCCTTGTCTGTAGCCATGTCTGTGGGCCCTTGAGTTGGCCACCTGGGTGAGGGCCTGCTTTTCCCAAATAACCCTTTTTGATCTTTGGCACCACTGAGGTTTCACAACCCTAACCATAGGCAAGCACCTTTCTACTTCCGTTTTCCAGGAGTTTACTATTTAAAATATCTTATATACGTGGAATCATACACTGTCACTTTGTTGGTGTCTTATCTCACTTAAAATAATGGCTTTAAGATTTATCCTTATTGTAGCATCTGACAAGATATTTTCATTTGATGCTAAAGAATATTTCATTGTATGTATAAGCCACATCTTTTTAAATCATTCATCTATTGAAGGGTGTTTGAGTTTTTTCACTTTTTGGCTTTTGTAAGTGATATAGTTTGGATCTGGGTCCCCATTCAAATCTCATGTCAAGTTGCAGTCCCTAGTGTTGGAGGTGGGCCTGGTGGGAGGTGATGGGATCGTAGGGTTGGCCTCTCACGAATGGTTTAGCAGCAGCCCCTTTGGTACTGTCTTTGCCATAGTGAGTGACTTCTTCTGAGATCTCATTTTTCAAAAGCATGTGGCACCTTCCCTCTCGTGCTCTCTTGTTCCTGCTCCCACCATGTGAGATGACTCTCTGTCCCTTTTCTTTCTGCCATGACTGGAAGCTTTTCAAGGCCTCCCCTAAAGCAGAAGCTGCTATGCTTGCCGTACAGCCTGCAGAACCATAAGCCAATTAAACCTCTTTTTAAAATAAATTACCAAGTCTCAGGAATTTTCTTATAGCACTGCAAGAATAAACTAATACAGTGAATATGGATGTGCAAATACTTCTTTCAGGTATACATTGCATACTTTAAATAGATGCTCAGAAGTGGAATTACTGGGTCATACAGTAACTTTATTTTTAATTTTTGGAGGAACCTCCATACATTTTTCAGGTGGCTGCATCACGTTTTTCCCACCAACAGTGTACAAGGGTTTCAATTTCTCTACATTGTTGACAATATATATTATTTTTTGTTTGCTTGATATTGGCCATCTTAATACACAGTAATACCTCATTGTGGTTTTTCTATTACATATTTCTAAAGATTAGAATTTTTTTTCAATAATTGTGTATTTCATCTTTGGAGAAACATTTTCATCTCTTGTCTATTAGTCATGTAACTTTTTGTTTTTTTTTTGGAGTTGTTCTGGATGTTATCTTCTGTCAAATATATGTATATTTTGGCTTTTCTGCTGCTTAGGTGGGACTCTTACTAAAACTTTAATGTGGAGAGATAAATTTAATGTAGTCCTACTTTTCTGTGCTTTTGAATTTTTTGCTCATGTGTTTGATGTTACATGCAAGAAAACATTGCTGGGATCAATGTCATAATCTTCCTATATTTTCTTCTAAAGATTGTATAATTATAATTCTTACGTTTAAATATTTAACTCATTCAAGACAGTTTTTGTATATGGTTCAGGGGAAGGATCCAACCTCAGTTTTTTCATATGGATATACAGTTTTCCAACACCATCTATTGAAGAGACTGTCTTTCTCTTATTGTGTGGTTATAGCAACCTTGTTGAAGATCATTTGAACATATACACAGTGGTTTGTTTTTGAGTTCTGTGTTCTGTTCCATCATCTATTTGTCTTCTTGCAAGTACCACACTGTTTTTATTTAGCTTTGTTATCTGTTCTAAAAACAGGAAACGTTGTGCATGTAACTTTGTTCTTGTTTTCTAAGAATGTTTGGGCTATCAGTGGTCCTTTGAAATTCCATGTAAAAGTTAAGAATTGTAAAAAATACTTTTTCACAAAGTATTATTTTTATTTTCATTAGGCTTACGTTGAATTTGAATATCACTGTGTAGTATGGTCATTTAACAATATCAAATCAACTGACACAGATAAGAATATGTTCAAGAGTGTGTTGAGTTTCACAGGTTTTTGGATTTGGCAATTTTGCTTCTGCTTTTGATTTCCCGTTTTATTACAGGTGGTATGAAAGGATGTGTTGTATAATTCAGTGTTGTATGATGAGAACTACGCTCAATACTTTGATGACCAAATAATCTGTACAACAAACCTCCATGACAGAAGTTTGCCAGTATAAGAAACCTGCACATATACTCTGATCTTAAAGTTTAAAAAAAAAGGGTGGGGGGGTTGTTTTGCATTCTAACAGGTTGTCCATGAAACAACAGTTACTCATTTTCTTCTCCACTTAACCCCGACACAGTTTAGTCTTCTTTCTGTTTCTATGAGTTTAACTACTTTAGGTATCTTACATAAGTGGAATTATATCGTTTCTGTCCTTTTGTGCCTGGGCTTCTTCCACATAAATAAAGCCTTAAAAATGTATCCTTATTGTGGATTTAACAAAATTTTCTGCTTTTAAGAAGCTGAGTAATATTTAATTATTTATATATTTGAAATTGTCTTTATTCATTTATTTATTAAGAAAAGTTCTTTTCACTTACTTGCTTTTGTAGATAATGCTACCGTGAATATGGATGTGTAAATTACTCTTCATTTGATAATATATGCAAGGGACTATTTGTGTTCTTTATTCTGTTTCACTGGTATTTTAAAATTGAGTTATAAAGTATTTCAATTACTATAACTTTATAATAGGTGTTTAAAATCAGGAGGTATGGTGCTTATGATGTTGTTTCTCTTTTTGACAGTTGTTCAGCACTTCTGGTCTCTTCAGTTCTGATATGATTTTAGGATTGCTTCTTTTTTTTTTTTTGAGGCGGAGTGGAGTGCAGTGGCGCCATCTCGTTTCATTGCAAGTTCCGCCTCCCATGTTCACACCATTGTCCTG	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_5780:HG3_PB_pbsv_3962:HG2_PB_pbsv_4061:HG2_10X_allpass_634:HG2_Ill_SpiralSDKrefine_11842:HG4_Ill_Krunchall_5993:HG3_Ill_Krunchall_5677;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_Krunchall_5780:HG4_Ill_Krunchall_5993:HG3_Ill_Krunchall_5677;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00297265;ClusterMaxSizeDiff=0.00297265;ClusterMaxEditDist=0.00386158;PBcalls=2;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=-3358;DistBack=-3407;DistForward=-1640;DistMin=-3407;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:64514-67871;PctSeqSimilarity=0.9147;PctSizeSimilarity=0.9985;PctRecOverlap=0.9952;SizeDiff=-5;StartDistance=-11;EndDistance=-16;GTMatch=0;TruScore=96;MatchId=2690.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:226:166:./.:106:0:90:75:./.:0:0:0:0:./.:275:20:./.:955:77:.:.:.
chr4	861261	HG2_Ill_svaba_5163	CGGCCAGCACCAGGGTCCCCACGGCGCGTCCCTTCAGGGCCTCCTCGGCCCAGGGCCTTGGTGAACACACGT	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_5672:HG2_PB_assemblyticsfalcon_18822:HG4_PB_pbsv_4107:HG2_PB_pbsv_4079:HG3_PB_pbsv_3974:HG4_Ill_svaba_5279:HG4_Ill_manta_1000:HG4_Ill_GATKHCSBGrefine_2852:HG4_Ill_250bpfermikitraw_5739:HG4_10X_allpass_741:HG3_Ill_svaba_5246:HG3_Ill_manta_920:HG3_Ill_GATKHCSBGrefine_2727:HG3_Ill_250bpfermikitraw_5490:HG2_PB_assemblyticsPBcR_18210:HG2_PB_SVrefine2PB10Xhap12_3006:HG2_Ill_svaba_5163:HG2_Ill_GATKHCSBGrefine_2733;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5672:HG4_Ill_svaba_5279:HG4_Ill_manta_1000:HG4_Ill_GATKHCSBGrefine_2852:HG4_Ill_250bpfermikitraw_5739:HG4_10X_allpass_741:HG3_Ill_svaba_5246:HG3_Ill_manta_920:HG3_Ill_GATKHCSBGrefine_2727:HG3_Ill_250bpfermikitraw_5490:HG2_PB_assemblyticsPBcR_18210:HG2_PB_SVrefine2PB10Xhap12_3006:HG2_Ill_svaba_5163:HG2_Ill_GATKHCSBGrefine_2733;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0425532;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.156028;PBcalls=6;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-71;DistBack=10871;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=131;REFWIDENED=4:861262-861463;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2691.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:29:./.:16:6:8:13:./.:0:0:0:0:0/1:17:18:./.:.:.:.:.:.
chr4	1086777	HG2_Ill_svaba_5176	CCAGGGTCTGCGTGCTCAGTGCTGACGCAGCCTGTGGTAGGGCAGAGGCTG	C	20	PASS	ClusterIDs=HG2_Ill_Cortex_6011:HG4_PB_HySA_6134:HG3_PB_HySA_6299:HG2_PB_HySA_7701:HG4_Ill_svaba_5290:HG4_Ill_scalpel_3930:HG4_Ill_Krunchall_6001:HG4_Ill_GATKHC_6893:HG4_Ill_GATKHCSBGrefine_2861:HG4_Ill_250bpfermikitraw_5747:HG4_Ill_150bpfermikitraw_5475:HG4_CG_vcfBeta_2749:HG3_PB_assemblyticsfalcon_18757:HG3_Ill_svaba_5259:HG3_Ill_scalpel_4089:HG3_Ill_Krunchall_5687:HG3_Ill_GATKHC_6799:HG3_Ill_GATKHCSBGrefine_2733:HG3_Ill_250bpfermikitraw_5498:HG3_Ill_150bpfermikitraw_5323:HG3_CG_vcfBeta_2367:HG3_10X_allpass_788:HG2_PB_assemblyticsfalcon_18841:HG2_PB_assemblyticsPBcR_18229:HG2_Ill_svaba_5176:HG2_Ill_scalpel_4008:HG2_Ill_SpiralSDKrefine_11857:HG2_Ill_Krunchall_5793:HG2_Ill_GATKHC_6781:HG2_Ill_GATKHCSBGrefine_2738:HG2_Ill_250bpfermikitraw_5683:HG2_Ill_150bpfermikitraw_5260:HG2_CG_vcfBeta_2448:HG4_PB_assemblyticsfalcon_18449:HG3_PB_pbsv_3986:HG4_PB_pbsv_4122:HG2_PB_pbsv_4094:HG4_Ill_Cortex_2551:HG3_Ill_Cortex_2564;NumClusterSVs=39;ExactMatchIDs=HG2_CG_vcfBeta_2448:HG2_Ill_150bpfermikitraw_5260:HG2_Ill_250bpfermikitraw_5683:HG2_Ill_GATKHCSBGrefine_2738:HG2_Ill_GATKHC_6781:HG2_Ill_Krunchall_5793:HG2_Ill_SpiralSDKrefine_11857:HG2_Ill_scalpel_4008:HG2_Ill_svaba_5176:HG2_PB_assemblyticsPBcR_18229:HG2_PB_assemblyticsfalcon_18841:HG3_10X_allpass_788:HG3_CG_vcfBeta_2367:HG3_Ill_150bpfermikitraw_5323:HG3_Ill_250bpfermikitraw_5498:HG3_Ill_GATKHCSBGrefine_2733:HG3_Ill_GATKHC_6799:HG3_Ill_Krunchall_5687:HG3_Ill_scalpel_4089:HG3_Ill_svaba_5259:HG3_PB_assemblyticsfalcon_18757:HG4_CG_vcfBeta_2749:HG4_Ill_150bpfermikitraw_5475:HG4_Ill_250bpfermikitraw_5747:HG4_Ill_GATKHCSBGrefine_2861:HG4_Ill_GATKHC_6893:HG4_Ill_Krunchall_6001:HG4_Ill_scalpel_3930:HG4_Ill_svaba_5290;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0517241;PBcalls=10;Illcalls=25;TenXcalls=1;CGcalls=3;PBexactcalls=3;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=3;HG2count=14;HG3count=13;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-50;DistBack=22521;DistForward=499;DistMin=499;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:1086776-1086828;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2694.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:44:1/1:3:21:5:17:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr4	1272617	HG2_PB_SVrefine2Falcon2Bionano_1969	CGTCCTCGCTCCTCCCTGGTCCTCTGCGTCCTCGCTCCTCCCTGGTCCTCTGCGTCCTCGCTCCTCCCTGGTCCTCTGCGTCCTCGCTCCTCCCTGGTCCTCTGCGTCCTCGCTCCTCCCTGGTCCTCTGC	T	10	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_18456:HG4_PB_HySA_6139:HG2_PB_HySA_7710:HG2_PB_assemblyticsfalcon_18846:HG2_PB_SVrefine2Falcon1plusDovetail_8495:HG4_PB_pbsv_4128:HG3_PB_pbsv_3991:HG4_PB_SVrefine2Falcon1Dovetail_2513:HG3_PB_assemblyticsfalcon_18762:HG3_PB_SVrefine2PBcRDovetail_1921:HG3_PB_SVrefine2Falcon1Dovetail_2583:HG2_PB_assemblyticsPBcR_18233:HG2_PB_SVrefine2PBcRplusDovetail_7888:HG2_PB_SVrefine2PB10Xhap12_3020:HG2_PB_SVrefine2Falcon2Bionano_1969:HG2_PB_pbsv_4099;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1969:HG2_PB_SVrefine2PB10Xhap12_3020:HG2_PB_SVrefine2PBcRplusDovetail_7888:HG2_PB_assemblyticsPBcR_18233:HG3_PB_SVrefine2Falcon1Dovetail_2583:HG3_PB_SVrefine2PBcRDovetail_1921:HG3_PB_assemblyticsfalcon_18762:HG4_PB_SVrefine2Falcon1Dovetail_2513;NumExactMatchSVs=8;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.188811;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-130;DistBack=-177;DistForward=-131;DistMin=-177;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=332;REFWIDENED=4:1272610-1273079;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9466;SizeDiff=0;StartDistance=7;EndDistance=7;GTMatch=0;TruScore=97;MatchId=2695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:./.:0:0:0:0:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr4	1273889	HG4_Ill_scalpel_3932	CATGTACCCCAGAACTTAAAGTATAATAAATTAAAATTAAAAAAAAGAAAT	C	20	PASS	ClusterIDs=HG4_PB_HySA_6140:HG4_Ill_GATKHC_6897:HG4_Ill_GATKHCSBGrefine_2863:HG2_Ill_GATKHC_6787:HG2_Ill_GATKHCSBGrefine_2740:HG2_PB_PB10Xdip_21354:HG4_CG_vcfBeta_2754:HG2_CG_vcfBeta_2452:HG3_PB_assemblyticsfalcon_18763:HG2_PB_assemblyticsfalcon_18847:HG4_Ill_manta_1002:HG2_Ill_manta_1147:HG2_PB_HySA_7711:HG4_Ill_svaba_5295:HG4_Ill_scalpel_3932:HG4_Ill_Krunchall_6004:HG4_Ill_250bpfermikitraw_5751:HG4_Ill_150bpfermikitraw_5478:HG2_Ill_svaba_5182:HG2_Ill_Krunchall_5798:HG2_Ill_250bpfermikitraw_5687:HG2_Ill_150bpfermikitraw_5265:HG2_10X_allpass_637;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_637:HG2_Ill_150bpfermikitraw_5265:HG2_Ill_250bpfermikitraw_5687:HG2_Ill_Krunchall_5798:HG2_Ill_svaba_5182:HG4_Ill_150bpfermikitraw_5478:HG4_Ill_250bpfermikitraw_5751:HG4_Ill_Krunchall_6004:HG4_Ill_scalpel_3932:HG4_Ill_svaba_5295;NumExactMatchSVs=10;ClusterMaxShiftDist=0.29703;ClusterMaxSizeDiff=0.29703;ClusterMaxEditDist=0.29703;PBcalls=5;Illcalls=15;TenXcalls=1;CGcalls=2;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=10;NumTechs=4;NumTechsExact=2;SVLEN=-50;DistBack=36;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:1273888-1273940;PctSeqSimilarity=0.9717;PctSizeSimilarity=0.96;PctRecOverlap=0.9412;SizeDiff=2;StartDistance=-3;EndDistance=-1;GTMatch=0;TruScore=95;MatchId=2696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:18:./.:0:0:0:0:./.:0:0:0:0:0/1:29:27:./.:.:.:.:.:.
chr4	1366517	HG3_Ill_150bpfermikitraw_5333	AGCACTCACCTCCCGCGTCCCTGCACTCACCTCCCGCGTCTCAGGGCACTCACCTCCCGCGTCCCTGCACTCACCTCCCGCGTCTCAGGGCACTCACCTCCCGCGTCTCAGGGCACTCACCTCCCGCGTCCCT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3051:HG3_PB_HySA_6317:HG2_PB_HySA_7724:HG3_Ill_Krunchall_5692:HG2_Ill_Krunchall_5800:HG4_PB_pbsv_4137:HG3_PB_pbsv_4002:HG2_PB_pbsv_4109:HG4_PB_assemblyticsfalcon_18469:HG4_PB_SVrefine2PBcRDovetail_2124:HG4_PB_SVrefine2Falcon1Dovetail_2521:HG4_Ill_svaba_5301:HG4_Ill_SVrefine2DISCOVARDovetail_3159:HG4_Ill_GATKHCSBGrefine_2867:HG4_10X_allpass_742:HG3_PB_assemblyticsfalcon_18772:HG3_PB_SVrefine2PBcRDovetail_1930:HG3_PB_SVrefine2Falcon1Dovetail_2591:HG3_Ill_svaba_5268:HG3_Ill_SVrefine2DISCOVARDovetail_3168:HG3_Ill_GATKHC_6808:HG3_Ill_GATKHCSBGrefine_2739:HG3_Ill_250bpfermikitraw_5506:HG3_Ill_150bpfermikitraw_5333:HG3_10X_allpass_791:HG2_PB_assemblyticsPBcR_18240:HG2_PB_SVrefine2PBcRplusDovetail_7896:HG2_PB_SVrefine2PB10Xhap12_3028:HG2_PB_SVrefine2Falcon2Bionano_1977:HG2_PB_SVrefine2Falcon1plusDovetail_8503:HG2_Ill_svaba_5187:HG2_Ill_SpiralSDKrefine_11862:HG2_Ill_SVrefine2DISCOVARplusDovetail_9182:HG2_Ill_GATKHC_6791:HG2_Ill_GATKHCSBGrefine_2743:HG2_Ill_250bpfermikitraw_5692:HG2_Ill_150bpfermikitraw_5270:HG2_10X_allpass_640;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3051:HG4_PB_SVrefine2PBcRDovetail_2124:HG4_PB_SVrefine2Falcon1Dovetail_2521:HG4_Ill_svaba_5301:HG4_Ill_SVrefine2DISCOVARDovetail_3159:HG4_Ill_GATKHCSBGrefine_2867:HG4_10X_allpass_742:HG3_PB_assemblyticsfalcon_18772:HG3_PB_SVrefine2PBcRDovetail_1930:HG3_PB_SVrefine2Falcon1Dovetail_2591:HG3_Ill_svaba_5268:HG3_Ill_SVrefine2DISCOVARDovetail_3168:HG3_Ill_GATKHC_6808:HG3_Ill_GATKHCSBGrefine_2739:HG3_Ill_250bpfermikitraw_5506:HG3_Ill_150bpfermikitraw_5333:HG3_10X_allpass_791:HG2_PB_assemblyticsPBcR_18240:HG2_PB_SVrefine2PBcRplusDovetail_7896:HG2_PB_SVrefine2PB10Xhap12_3028:HG2_PB_SVrefine2Falcon2Bionano_1977:HG2_PB_SVrefine2Falcon1plusDovetail_8503:HG2_Ill_svaba_5187:HG2_Ill_SpiralSDKrefine_11862:HG2_Ill_SVrefine2DISCOVARplusDovetail_9182:HG2_Ill_GATKHC_6791:HG2_Ill_GATKHCSBGrefine_2743:HG2_Ill_250bpfermikitraw_5692:HG2_Ill_150bpfermikitraw_5270:HG2_10X_allpass_640;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0150376;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.0151515;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-132;DistBack=8375;DistForward=-114;DistMin=-114;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=103;REFWIDENED=4:1366458-1366692;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2697.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:56:1/1:0:9:2:13:./.:0:0:0:0:1/1:0:27:./.:.:.:.:.:.
chr4	1373585	HG4_PB_SVrefine2Falcon1Dovetail_2522	GTCGCGCGGCTGGTTCACGTGGCATCAGAATTCAGACGCAGGCGGTCGTGCCCGTGGTCGCGCGGCTGGTTCATGTGGCGTCAGAATTCAGACCCAGCCGGGAGTGACCGTGTTCTC	TTCTTTTG	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8504:HG4_PB_HySA_6146:HG3_PB_HySA_6318:HG2_PB_HySA_7725:HG4_PB_SVrefine2PBcRDovetail_2125:HG4_PB_SVrefine2Falcon1Dovetail_2522:HG4_Ill_SVrefine2DISCOVARDovetail_3160:HG3_PB_assemblyticsfalcon_18773:HG3_PB_SVrefine2PBcRDovetail_1931:HG3_PB_SVrefine2Falcon1Dovetail_2592:HG3_Ill_SVrefine2DISCOVARDovetail_3169:HG2_PB_assemblyticsPBcR_18241:HG2_PB_SVrefine2PBcRplusDovetail_7897:HG2_PB_SVrefine2PB10Xhap12_3029:HG2_PB_SVrefine2Falcon2Bionano_1978:HG2_Ill_SVrefine2DISCOVARplusDovetail_9183:HG2_10X_SVrefine210Xhap12_3052:HG4_PB_assemblyticsfalcon_18470:HG4_Ill_Krunchall_6006:HG3_Ill_Krunchall_5693:HG2_Ill_Krunchall_5801:HG4_PB_pbsv_4139:HG2_PB_pbsv_4110:HG4_Ill_GATKHC_6902:HG4_Ill_GATKHCSBGrefine_2868:HG3_Ill_GATKHC_6809:HG3_Ill_GATKHCSBGrefine_2740:HG2_Ill_GATKHC_6792:HG2_Ill_GATKHCSBGrefine_2744:HG4_Ill_manta_1004:HG3_Ill_manta_921:HG2_Ill_manta_1148:HG2_Ill_SpiralSDKrefine_11863:HG4_Ill_Spiral_342:HG3_Ill_Spiral_4473:HG2_Ill_Spiral_291:HG4_Ill_MetaSV_3620:HG4_10X_allpass_743:HG3_Ill_250bpfermikitraw_5507:HG3_Ill_150bpfermikitraw_5334:HG3_10X_allpass_792:HG2_Ill_250bpfermikitraw_5693:HG2_Ill_150bpfermikitraw_5271:HG2_10X_allpass_641:HG3_PB_pbsv_4003;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3052:HG2_Ill_SVrefine2DISCOVARplusDovetail_9183:HG2_PB_SVrefine2Falcon2Bionano_1978:HG2_PB_SVrefine2PB10Xhap12_3029:HG2_PB_SVrefine2PBcRplusDovetail_7897:HG2_PB_assemblyticsPBcR_18241:HG3_Ill_SVrefine2DISCOVARDovetail_3169:HG3_PB_SVrefine2Falcon1Dovetail_2592:HG3_PB_SVrefine2PBcRDovetail_1931:HG3_PB_assemblyticsfalcon_18773:HG4_Ill_SVrefine2DISCOVARDovetail_3160:HG4_PB_SVrefine2Falcon1Dovetail_2522:HG4_PB_SVrefine2PBcRDovetail_2125;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0535714;ClusterMaxSizeDiff=0.0535714;ClusterMaxEditDist=0.13913;PBcalls=17;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-109;DistBack=6935;DistForward=-100;DistMin=-100;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=72;REFWIDENED=4:1373513-1373653;PctSeqSimilarity=0.9529;PctSizeSimilarity=0.9732;PctRecOverlap=0.6325;SizeDiff=-3;StartDistance=39;EndDistance=43;GTMatch=0;TruScore=85;MatchId=2698.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:2:14:1:8:./.:0:0:0:0:1/1:1:39:./.:.:.:.:.:.
chr4	1600953	HG2_Ill_scalpel_4017	GCAGGGCCGTCAGCTCCAACCCTGCCTGGTACTTCACCGAGGCCAGGGGATCCAGGGTGCCGGAGCT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9187:HG4_Ill_svaba_5314:HG2_PB_pbsv_4123:HG2_PB_assemblyticsfalcon_18869:HG4_Ill_scalpel_3941:HG4_Ill_GATKHC_6914:HG4_Ill_GATKHCSBGrefine_2872:HG4_Ill_250bpfermikitraw_5769:HG4_Ill_150bpfermikitraw_5491:HG2_Ill_svaba_5199:HG2_Ill_scalpel_4017:HG2_Ill_SpiralSDKrefine_11872:HG2_Ill_Krunchall_5807:HG2_Ill_GATKHC_6802:HG2_Ill_GATKHCSBGrefine_2747:HG2_Ill_250bpfermikitraw_5702:HG2_Ill_150bpfermikitraw_5280:HG2_Ill_breakscan11_557:HG2_PB_HySA_7750:HG4_Ill_SVrefine2DISCOVARDovetail_3164:HG2_PB_SVrefine2PBcRplusDovetail_7902:HG2_PB_SVrefine2PB10Xhap12_3037;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5280:HG2_Ill_250bpfermikitraw_5702:HG2_Ill_GATKHCSBGrefine_2747:HG2_Ill_GATKHC_6802:HG2_Ill_Krunchall_5807:HG2_Ill_SpiralSDKrefine_11872:HG2_Ill_scalpel_4017:HG2_Ill_svaba_5199:HG4_Ill_150bpfermikitraw_5491:HG4_Ill_250bpfermikitraw_5769:HG4_Ill_GATKHCSBGrefine_2872:HG4_Ill_GATKHC_6914:HG4_Ill_scalpel_3941:HG4_Ill_svaba_5314;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0763359;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.246154;PBcalls=5;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=18667;DistForward=-47;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=185;REFWIDENED=4:1600788-1601038;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2699.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:20:0|1:24:1:1:18:./.:0:0:0:0:0/1:28:24:./.:.:.:.:.:.
chr4	1602956	HG2_Ill_SVrefine2DISCOVARplusDovetail_9188	AGGTCGGACACCCACCTGGGTCCCCCATGCAGGAAAAACCTGCACTTTCCTGGGCACTGCTTTCCGGGGGCCCCCCGTACAGTGGGGACACCAGGCAGCGGCCTCGCCCTTCCAGCTGCTCTTCCGGACACACCACCCTCAAGGGCCCATCCGTCCACCGTTCACACAGGCCAGGGCTGAGCAGTCAGGGCGTGGCGGGAGGAGCTCCATGGGACCCGGCCCCTGTCATCCCAGCTCCTAGGCCTCCTCCTGCACCCACCTGTGCCTTGCTGCCCCTCCCGGGTGCACTGCGCCCCCCAGCCCCCACCTGGAAAGTCTGCAGAACAGGCTGCGCCCCATTTGCCATGCGCCCCATCTGCCATGCGCCCCATCTGCCATGCGCCCCATCTGCCATGCACCCCATCTGCCATGCCCAACCCTCAAGGCCTGCCAGGATCACCCATTCCCCAGGAGCAACATTTGTCTCTCCTGCCCTCCCCTGGCACCCCCTGCCCCTGGGCTGTGAGCTCCTTGGGGAGAGGATGTGTCCCTCCTGGGGGCCCTAAGCTATGGCAGGGCCTGGCACGTGGGCTGCCTGACCCAAAGTGCCCGATGGGGACTAGGTGCCAAACTAGACGGGTGGCCAATCCAGCTAGAGCGAGGCTGGGGGAGGGGGGATGGGCGGCCAGTCCAGCTTGTGTGGGGCCTGGGGAGGTGGGCCAGGGGAGGTGGGAC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_558:HG2_10X_allpass_642:HG4_10X_allpass_744:HG2_PB_assemblyticsfalcon_18870:HG2_PB_HySA_7751:HG2_Ill_tnscope_438:HG4_Ill_manta_1006:HG4_Ill_SVrefine2DISCOVARDovetail_3165:HG4_Ill_MetaSV_3622:HG2_PB_pbsv_4124:HG2_PB_SVrefine2PBcRplusDovetail_7903:HG2_PB_SVrefine2PB10Xhap12_3038:HG2_PB_SVrefine2Falcon1plusDovetail_8510:HG2_Ill_manta_1151:HG2_Ill_SpiralSDKrefine_11873:HG2_Ill_SVrefine2DISCOVARplusDovetail_9188:HG2_Ill_MetaSV_3471:HG2_Ill_GATKHCSBGrefine_2748;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2748:HG2_Ill_MetaSV_3471:HG2_Ill_SVrefine2DISCOVARplusDovetail_9188:HG2_Ill_SpiralSDKrefine_11873:HG2_Ill_manta_1151:HG2_PB_SVrefine2Falcon1plusDovetail_8510:HG2_PB_SVrefine2PB10Xhap12_3038:HG2_PB_SVrefine2PBcRplusDovetail_7903:HG2_PB_pbsv_4124:HG4_Ill_MetaSV_3622:HG4_Ill_SVrefine2DISCOVARDovetail_3165:HG4_Ill_manta_1006;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0126671;ClusterMaxSizeDiff=0.0126671;ClusterMaxEditDist=0.0126671;PBcalls=6;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-713;DistBack=-714;DistForward=-712;DistMin=-714;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=4:1602957-1603672;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2700.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:43:0|1:26:1:0:41:./.:0:0:0:0:0/1:44:12:0/1:42:9:.:.:.
chr4	1722657	HG2_PB_SVrefine2PBcRplusDovetail_7907	GCCGCCGCCCGGCCGCCCGCGGGGCACTCTAGGACATGGAGTCCCGCCGCCCGGCCGCCCGCGGGGCACTCTAGGACATGGAGTC	G	20	PASS	ClusterIDs=HG2_10X_allpass_643:HG2_PB_assemblyticsfalcon_18880:HG2_PB_HySA_7768:HG2_PB_pbsv_4130:HG4_PB_pbsv_4161:HG4_PB_SVrefine2PBcRDovetail_2133:HG4_Ill_250bpfermikitraw_5776:HG2_PB_SVrefine2PBcRplusDovetail_7907:HG2_PB_SVrefine2PB10Xhap12_3045:HG2_Ill_GATKHCSBGrefine_2749:HG2_Ill_250bpfermikitraw_5709;NumClusterSVs=11;ExactMatchIDs=HG2_10X_allpass_643:HG4_PB_SVrefine2PBcRDovetail_2133:HG4_Ill_250bpfermikitraw_5776:HG2_PB_SVrefine2PBcRplusDovetail_7907:HG2_PB_SVrefine2PB10Xhap12_3045:HG2_Ill_GATKHCSBGrefine_2749:HG2_Ill_250bpfermikitraw_5709;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0235294;ClusterMaxSizeDiff=0.0235294;ClusterMaxEditDist=0.0946746;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-84;DistBack=13660;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=128;REFWIDENED=4:1722658-1722869;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2702.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:37:./.:25:9:4:27:./.:0:0:0:0:0/1:30:14:./.:.:.:.:.:.
chr4	1830226	HG2_Ill_GATKHCSBGrefine_2751	GGGGGGCTGACCCCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1988:HG3_PB_assemblyticsfalcon_18805:HG3_PB_pbsv_4022:HG3_Ill_GATKHC_6828:HG3_Ill_GATKHCSBGrefine_2744:HG2_PB_pbsv_4134:HG2_Ill_GATKHCSBGrefine_2751:HG3_PB_SVrefine2PBcRDovetail_1940:HG2_PB_SVrefine2PBcRplusDovetail_7910:HG2_PB_SVrefine2PB10Xhap12_3049;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2751:HG2_PB_pbsv_4134:HG3_Ill_GATKHCSBGrefine_2744:HG3_Ill_GATKHC_6828:HG3_PB_pbsv_4022;NumExactMatchSVs=5;ClusterMaxShiftDist=0.130841;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.186916;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=60735;DistForward=-49;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=91;REFWIDENED=4:1830193-1830335;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:33:0|1:10:2:2:8:./.:0:0:0:0:0/1:10:3:./.:.:.:.:.:.
chr4	2444608	HG3_Ill_150bpfermikitraw_5346	TCACTGGGGGTGCTGGGGGCCTTGGGGGCAGGGAGCTCACTGGGGTGCTGGGGGCCTTGGGGGGAGC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9195:HG3_PB_HySA_6355:HG2_PB_pbsv_4143:HG4_PB_assemblyticsfalcon_18511:HG3_PB_pbsv_4031:HG4_Ill_svaba_5332:HG4_Ill_GATKHC_6933:HG4_Ill_250bpfermikitraw_5784:HG2_Ill_svaba_5216:HG2_Ill_GATKHC_6821:HG2_Ill_250bpfermikitraw_5715:HG4_PB_pbsv_4175:HG4_PB_HySA_6192:HG4_Ill_GATKHC_6932:HG4_Ill_250bpfermikitraw_5783:HG4_Ill_150bpfermikitraw_5503:HG3_Ill_250bpfermikitraw_5528:HG3_Ill_150bpfermikitraw_5346:HG2_PB_assemblyticsfalcon_18895:HG2_PB_HySA_7784:HG2_Ill_250bpfermikitraw_5714:HG4_Ill_SVrefine2DISCOVARDovetail_3172:HG3_PB_SVrefine2PBcRDovetail_1945:HG3_PB_SVrefine2Falcon1Dovetail_2612:HG3_Ill_SVrefine2DISCOVARDovetail_3180:HG2_PB_SVrefine2PBcRplusDovetail_7915:HG2_PB_SVrefine2PB10Xhap12_3057;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5714:HG2_PB_HySA_7784:HG2_PB_assemblyticsfalcon_18895:HG3_Ill_150bpfermikitraw_5346:HG3_Ill_250bpfermikitraw_5528:HG4_Ill_150bpfermikitraw_5503:HG4_Ill_250bpfermikitraw_5783:HG4_Ill_GATKHC_6932;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.0719424;PBcalls=12;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=6888;DistForward=-7;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=139;REFWIDENED=4:2444589-2444793;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.9848;PctRecOverlap=0.3881;SizeDiff=1;StartDistance=-41;EndDistance=-40;GTMatch=0;TruScore=78;MatchId=2704.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:49:1/1:3:22:2:21:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr4	3626112	HG2_Ill_GATKHC_6857	CGTGGGTTCTGGGAGGGATGGGGAGGGGCAGCCTGGGAGGGGGAGAAGCTGAGT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_4170:HG4_PB_HySA_6230:HG2_PB_assemblyticsPBcR_18310:HG2_PB_HySA_7823:HG4_PB_pbsv_4199:HG4_Ill_svaba_5360:HG4_Ill_GATKHC_6962:HG4_Ill_GATKHCSBGrefine_2892:HG2_Ill_svaba_5243:HG2_Ill_GATKHC_6857:HG2_Ill_GATKHCSBGrefine_2767:HG2_Ill_250bpfermikitraw_5737:HG4_PB_HySA_6229;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5737:HG2_Ill_GATKHCSBGrefine_2767:HG2_Ill_GATKHC_6857:HG2_Ill_svaba_5243:HG4_Ill_GATKHCSBGrefine_2892:HG4_Ill_GATKHC_6962:HG4_Ill_svaba_5360;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0550459;ClusterMaxSizeDiff=0.0550459;ClusterMaxEditDist=0.0925926;PBcalls=6;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-53;DistBack=3315;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=66;REFWIDENED=4:3626111-3626232;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:39:./.:13:11:2:7:./.:0:0:0:0:./.:3:3:./.:.:.:.:.:.
chr4	3648476	HG4_PB_SVrefine2PBcRDovetail_2146	AAATCCTAGTCCCCAGGCTGATGATGCTAGGAGGAGGGGAGGTGAATACTCGTCCCCAGGCTGATGATACTAGGAGGAGGGGAGGTGAATCCTCATCCTCAGGCTGGTGATACTAGGAGGAGGGGAGGTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3076:HG4_PB_pbsv_4200:HG2_PB_pbsv_4171:HG2_Ill_SpiralSDKrefine_11907:HG4_PB_SVrefine2PBcRDovetail_2146:HG2_PB_SVrefine2PBcRplusDovetail_7928:HG2_Ill_SVrefine2DISCOVARplusDovetail_9209;NumClusterSVs=7;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3076:HG4_PB_SVrefine2PBcRDovetail_2146:HG2_PB_SVrefine2PBcRplusDovetail_7928:HG2_Ill_SVrefine2DISCOVARplusDovetail_9209;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00775194;ClusterMaxSizeDiff=0.00772201;ClusterMaxEditDist=0.0617761;PBcalls=4;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-129;DistBack=14659;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=216;REFWIDENED=4:3648477-3648821;PctSeqSimilarity=0.9632;PctSizeSimilarity=1;PctRecOverlap=0.2769;SizeDiff=0;StartDistance=-94;EndDistance=-94;GTMatch=0;TruScore=74;MatchId=2708.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:1|0:8:25:25:2:./.:0:0:0:0:0/0:34:0:./.:.:.:.:.:.
chr4	3861255	HG4_Ill_250bpfermikitraw_5815	GCACTGGGGCTCAGTCTTGAGGAATACATTTACCTGGTGCCTGCTGTATACTGGCCACAGGCTAAA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_18320:HG3_PB_assemblyticsfalcon_18855:HG2_PB_pbsv_4177:HG4_PB_pbsv_4208:HG4_Ill_GATKHCSBGrefine_2899:HG4_Ill_250bpfermikitraw_5815:HG2_Ill_manta_1158:HG2_Ill_GATKHCSBGrefine_2772:HG2_Ill_250bpfermikitraw_5745;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5745:HG2_Ill_GATKHCSBGrefine_2772:HG2_Ill_manta_1158:HG4_Ill_250bpfermikitraw_5815:HG4_Ill_GATKHCSBGrefine_2899;NumExactMatchSVs=5;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.0625;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-65;DistBack=-141;DistForward=68;DistMin=-141;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=79;REFWIDENED=4:3861254-3861400;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:0|1:30:2:2:21:./.:0:0:0:0:0/1:21:15:./.:.:.:.:.:.
chr4	6651589	HG3_PB_SVrefine2PBcRDovetail_1970	CCAGACTTTTTTTTTATTTTTTGAGACAGAGTCTCCCTCTGTCACCCAAGCTGGAGTGCAGTGGCACGATCTCAGTTCACTGCAACCTCCACTTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTATAGGCATGAGCCACCTCACACCCAGCTAATTTTTGTATTTCAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCAAACTCCTGATCTCAAGCAATCCACCCACCTCAGCCTCCCAAAATGCTGGGATTACAAGCATGAGCCACCGCACCTGGCATCTACCCCTTAATTTGCATGTAATTAAAAGTGGGCATAAATATGACTGCAGAACTGCCCTGAGCAGCTCCTCTGGGCTCACTGCCTATGAGCACACCACCTGTGCTGCTACTGTGCACTGCTGCATCAATAACTCTTGCTGTCTACCACCACTGGCTCACCCTTGAATTCCTTCCTGGAGGAAGCCAAGAACCCTCCCAGGCTAAGCCCCAATTTGTCCTGCATCAGTTATATTCCCATGATATGATGTCTCTGAGACATCATAGATTCAAAAGAATCTAAACTGCCAACATTAATAATAGTTTCTAGAGTTTCAAGGTTTCTAGACACAAAAATCAATAAAAATCAGTAGTGTTTCTCTTTACCGGGAACGAAGAGGAAATATATTTTCTGAAAGGTACCACTGATAATAGAACCCAAAAACTTTTTTTTAATGGTGTGTTTCCTTGGGATACCATAACAAACTGCCACAAATTAAGTGGCTTAAAACAGAAATTTGTTTTTTCATAGTTCTGGAGTCTAAAATTAAGGTGTTGGCAGGGCCATGGGCTCTCTGAACCATCTGGGCAAGAATCTTTCCTTGCTTCTCCCTGGCTTCTGGTAATTGTCAGCAATTCTTGGCATTCCTTGGCTTGTGGCTGCGTCAGTCCAGTCTGCCTCCATTATCCCATGGCCTTCTTCCCTTTGTCTTCATGGAAGGACACCAGTCATTGCATTTAGAGCCCGCTCTCATCCAGTCTAACCTCATCTTAACTAGGTCTGCAAAGAACCTATTTTCAATAAAGTCACATTCTAAGGTTCTGGGCAGAAAAATTTTGCAGGGACATTATTCAACCCAGTACAAATGGTTGGAAAATATATATTCGTATATATTAAATTTTTAATATGTGAAAAACCATTATGCATAAAATTATGTTGAAATACATTAAATAATGACAAAATAGATTAAGAAAATTAGTATCATAATTATTCTCCAAACTGCTCCCACAAATCAAGGCAGTCCCAATAAAAATCTCTT	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_440:HG2_10X_allpass_646:HG4_Ill_Krunchall_6087:HG2_Ill_Krunchall_5878:HG4_10X_allpass_754:HG3_10X_allpass_801:HG2_PB_HySA_7881:HG2_PB_assemblyticsPBcR_18360:HG4_PB_assemblyticsfalcon_18580:HG3_PB_assemblyticsfalcon_18888:HG2_PB_assemblyticsfalcon_18975:HG4_PB_pbsv_4228:HG4_PB_SVrefine2PBcRDovetail_2153:HG4_PB_SVrefine2Falcon1Dovetail_2569:HG4_Ill_MetaSV_3633:HG3_PB_pbsv_4094:HG3_PB_SVrefine2PBcRDovetail_1970:HG3_PB_SVrefine2Falcon1Dovetail_2643:HG3_Ill_SVrefine2DISCOVARDovetail_3206:HG3_Ill_MetaSV_3638:HG2_PB_pbsv_4195:HG2_PB_SVrefine2PBcRplusDovetail_7944:HG2_PB_SVrefine2PB10Xhap12_3088:HG2_PB_SVrefine2Falcon2Bionano_2016:HG2_PB_SVrefine2Falcon1plusDovetail_8561:HG2_Ill_SpiralSDKrefine_11941:HG2_Ill_SVrefine2DISCOVARplusDovetail_9220:HG2_Ill_MetaSV_3479:HG2_Ill_GATKHCSBGrefine_2786:HG2_10X_SVrefine210Xhap12_3095:HG2_Ill_breakscan11_572;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3095:HG2_Ill_GATKHCSBGrefine_2786:HG2_Ill_MetaSV_3479:HG2_Ill_SVrefine2DISCOVARplusDovetail_9220:HG2_Ill_SpiralSDKrefine_11941:HG2_PB_SVrefine2Falcon1plusDovetail_8561:HG2_PB_SVrefine2Falcon2Bionano_2016:HG2_PB_SVrefine2PB10Xhap12_3088:HG2_PB_SVrefine2PBcRplusDovetail_7944:HG2_PB_pbsv_4195:HG3_Ill_MetaSV_3638:HG3_Ill_SVrefine2DISCOVARDovetail_3206:HG3_PB_SVrefine2Falcon1Dovetail_2643:HG3_PB_SVrefine2PBcRDovetail_1970:HG3_PB_pbsv_4094:HG4_Ill_MetaSV_3633:HG4_PB_SVrefine2Falcon1Dovetail_2569:HG4_PB_SVrefine2PBcRDovetail_2153:HG4_PB_pbsv_4228;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00682594;ClusterMaxSizeDiff=0.00682594;ClusterMaxEditDist=0.00682594;PBcalls=16;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1321;DistBack=19606;DistForward=1137;DistMin=1137;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=4:6651590-6652914;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2710.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:60:./.:0:14:7:11:./.:0:0:0:0:1/1:0:27:1/1:4:81:1197:.:.
chr4	7021476	HG2_PB_assemblyticsPBcR_18366	CGCTGGGCTCAGGTCAGGGAGGACTCTGGGGCACAGAGGTGGGTATGTGAACCCT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_4099:HG3_Ill_GATKHC_6931:HG3_Ill_GATKHC_6932:HG2_Ill_GATKHC_6905:HG2_Ill_GATKHC_6904:HG2_PB_pbsv_4199:HG3_PB_HySA_6431:HG4_PB_pbsv_4233:HG2_PB_HySA_7888:HG3_Ill_250bpfermikitraw_5596:HG3_Ill_150bpfermikitraw_5408:HG2_PB_assemblyticsPBcR_18366:HG2_Ill_250bpfermikitraw_5777:HG2_PB_assemblyticsfalcon_18981;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5777:HG2_PB_assemblyticsPBcR_18366:HG3_Ill_150bpfermikitraw_5408:HG3_Ill_250bpfermikitraw_5596;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0550459;ClusterMaxSizeDiff=0.0550459;ClusterMaxEditDist=0.261682;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=-139;DistForward=1866;DistMin=-139;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=484;REFWIDENED=4:7021416-7021953;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2712.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:68:1/1:3:25:0:23:./.:0:0:0:0:1/1:1:16:./.:.:.:.:.:.
chr4	7257581	HG4_Ill_Krunchall_6092	CGGGGCTGGAGCGTGGGGCCCCGGGGCTGGAGCGTGGGGACCCGGGGCTGGAGCGTGGGGCCCCGGGGCTGGAGCGTGGGGACCCGGGGCTGGAGCGTGGGGCCCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3101:HG2_PB_assemblyticsfalcon_18985:HG3_PB_SVrefine2Falcon1Dovetail_2651:HG3_PB_assemblyticsfalcon_18901:HG4_PB_HySA_6278:HG4_PB_assemblyticsfalcon_18591:HG3_PB_HySA_6436:HG4_Ill_svaba_5411:HG3_Ill_svaba_5383:HG3_Ill_Krunchall_5773:HG3_Ill_250bpfermikitraw_5599:HG3_Ill_150bpfermikitraw_5411:HG3_PB_pbsv_4103:HG2_PB_HySA_7893:HG4_PB_SVrefine2Falcon1Dovetail_2577:HG4_Ill_svaba_5410:HG4_Ill_MetaSV_3634:HG4_Ill_Krunchall_6092:HG4_Ill_GATKHC_7013:HG4_Ill_GATKHCSBGrefine_2921:HG4_Ill_250bpfermikitraw_5852:HG4_Ill_150bpfermikitraw_5565:HG2_PB_SVrefine2Falcon1plusDovetail_8566:HG2_Ill_svaba_5296:HG2_Ill_manta_1164:HG2_Ill_breakscan11_575:HG2_Ill_SpiralSDKrefine_11945:HG2_Ill_MetaSV_3480:HG2_Ill_Krunchall_5881:HG2_Ill_GATKHC_6908:HG2_Ill_GATKHCSBGrefine_2789:HG4_PB_pbsv_4236:HG2_PB_pbsv_4202:HG4_PB_SVrefine2PBcRDovetail_2158:HG4_Ill_SVrefine2DISCOVARDovetail_3196:HG2_Ill_SVrefine2DISCOVARplusDovetail_9226;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2789:HG2_Ill_GATKHC_6908:HG2_Ill_Krunchall_5881:HG2_Ill_MetaSV_3480:HG2_Ill_SpiralSDKrefine_11945:HG2_Ill_breakscan11_575:HG2_Ill_manta_1164:HG2_Ill_svaba_5296:HG2_PB_SVrefine2Falcon1plusDovetail_8566:HG4_Ill_150bpfermikitraw_5565:HG4_Ill_250bpfermikitraw_5852:HG4_Ill_GATKHCSBGrefine_2921:HG4_Ill_GATKHC_7013:HG4_Ill_Krunchall_6092:HG4_Ill_MetaSV_3634:HG4_Ill_svaba_5410:HG4_PB_SVrefine2Falcon1Dovetail_2577:HG4_PB_assemblyticsfalcon_18591;NumExactMatchSVs=18;ClusterMaxShiftDist=0.240838;ClusterMaxSizeDiff=0.240838;ClusterMaxEditDist=0.278351;PBcalls=13;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=14;NumTechs=3;NumTechsExact=2;SVLEN=-105;DistBack=-19;DistForward=-97;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=110;REFWIDENED=4:7257531-7257745;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2713.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:31:0|1:25:3:2:28:./.:0:0:0:0:0/1:36:20:./.:.:.:.:.:.
chr4	7635511	HG2_PB_pbsv_4215	TCCTTCATGTGTCCGTCAGGCGGGATTAACGGCCAGCTCCGTGTCCTGTTTTGCTCGAGGTACAAAAATGGCACATGGGCCAGTGAGGATGGTGGACACACAGTTGCGTCGTAAGAACGTTTGAAAAACTGTATCATGGAAAAAGTGCTTTAATGAGGGGGATTTGGGCTTCCCTGGCCAAATGGCACAGACGTGTGGGTCAAAGTTGAATGGATGATGAATGAACCAAGAAGTCCTGAGGACTTCCTTCCTTCTTCCTGGTTATCCAGGGAATCCACGTGCAGTGTATGCAGAACTTTGGGAGGGACAGGCCGGGCACCGTGGCTCATGCCTTAATCCTAG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7954:HG4_10X_allpass_756:HG4_Ill_MetaSV_3638:HG3_Ill_MetaSV_3645:HG2_Ill_tnscope_443:HG2_Ill_MetaSV_3484:HG4_PB_assemblyticsfalcon_18604:HG4_PB_SVrefine2Falcon1Dovetail_2585:HG4_Ill_manta_1020:HG4_Ill_GATKHCSBGrefine_2928:HG3_PB_pbsv_4116:HG3_PB_assemblyticsfalcon_18915:HG3_PB_SVrefine2PBcRDovetail_1980:HG3_PB_SVrefine2Falcon1Dovetail_2657:HG3_Ill_SVrefine2DISCOVARDovetail_3217:HG3_Ill_GATKHCSBGrefine_2791:HG3_10X_allpass_803:HG2_PB_pbsv_4215:HG2_PB_assemblyticsfalcon_19001:HG2_PB_SVrefine2PB10Xhap12_3103:HG2_PB_SVrefine2Falcon2Bionano_2024:HG2_PB_SVrefine2Falcon1plusDovetail_8575:HG2_Ill_manta_1167:HG2_Ill_SpiralSDKrefine_11952:HG2_Ill_SVrefine2DISCOVARplusDovetail_9230:HG2_Ill_GATKHCSBGrefine_2792:HG2_10X_allpass_648:HG2_10X_SVrefine210Xhap12_3110:HG4_Ill_Krunchall_6103:HG4_PB_pbsv_4247:HG2_PB_assemblyticsPBcR_18382;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3110:HG2_10X_allpass_648:HG2_Ill_GATKHCSBGrefine_2792:HG2_Ill_SVrefine2DISCOVARplusDovetail_9230:HG2_Ill_SpiralSDKrefine_11952:HG2_Ill_manta_1167:HG2_PB_SVrefine2Falcon1plusDovetail_8575:HG2_PB_SVrefine2Falcon2Bionano_2024:HG2_PB_SVrefine2PB10Xhap12_3103:HG2_PB_assemblyticsfalcon_19001:HG2_PB_pbsv_4215:HG3_10X_allpass_803:HG3_Ill_GATKHCSBGrefine_2791:HG3_Ill_SVrefine2DISCOVARDovetail_3217:HG3_PB_SVrefine2Falcon1Dovetail_2657:HG3_PB_SVrefine2PBcRDovetail_1980:HG3_PB_assemblyticsfalcon_18915:HG3_PB_pbsv_4116:HG4_Ill_GATKHCSBGrefine_2928:HG4_Ill_manta_1020:HG4_PB_SVrefine2Falcon1Dovetail_2585:HG4_PB_assemblyticsfalcon_18604;NumExactMatchSVs=22;ClusterMaxShiftDist=0.167376;ClusterMaxSizeDiff=0.167376;ClusterMaxEditDist=0.183381;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-341;DistBack=12332;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:7635512-7635853;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2715.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:0|1:29:5:1:20:./.:0:0:0:0:0/1:43:18:0/1:30:7:.:.:.
chr4	7750404	HG4_Ill_150bpfermikitraw_5582	GTCTCAATCCCGGAGGTCTCGGGTGGCATGGGTTTAAAATCAGACGGTGGGATCGGGGACGACCCCT	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_5791:HG4_PB_assemblyticsfalcon_18609:HG3_PB_pbsv_4120:HG4_PB_pbsv_4251:HG2_PB_pbsv_4220:HG4_Ill_GATKHC_7037:HG4_Ill_GATKHCSBGrefine_2931:HG3_Ill_GATKHC_6960:HG3_Ill_GATKHCSBGrefine_2793:HG2_Ill_GATKHC_6926:HG2_Ill_GATKHCSBGrefine_2794:HG4_Ill_manta_1022:HG3_Ill_manta_939:HG2_Ill_manta_1169:HG2_Ill_SpiralSDKrefine_11955:HG3_Ill_Spiral_4549:HG2_Ill_Spiral_295:HG2_PB_assemblyticsfalcon_19006:HG2_PB_assemblyticsPBcR_18387:HG2_PB_HySA_7918:HG4_Ill_svaba_5433:HG4_Ill_Krunchall_6107:HG4_Ill_250bpfermikitraw_5868:HG4_Ill_150bpfermikitraw_5582:HG3_Ill_svaba_5405:HG3_Ill_Krunchall_5788:HG3_Ill_250bpfermikitraw_5617:HG3_Ill_150bpfermikitraw_5426:HG2_Ill_svaba_5318:HG2_Ill_Krunchall_5894;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5791:HG4_Ill_svaba_5433:HG4_Ill_Krunchall_6107:HG4_Ill_250bpfermikitraw_5868:HG4_Ill_150bpfermikitraw_5582:HG3_Ill_svaba_5405:HG3_Ill_Krunchall_5788:HG3_Ill_250bpfermikitraw_5617:HG3_Ill_150bpfermikitraw_5426:HG2_Ill_svaba_5318:HG2_Ill_Krunchall_5894;NumExactMatchSVs=11;ClusterMaxShiftDist=0.108527;ClusterMaxSizeDiff=0.108527;ClusterMaxEditDist=0.213115;PBcalls=7;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=7053;DistForward=4216;DistMin=4216;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=92;REFWIDENED=4:7750395-7750552;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2716.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:./.:7:12:21:9:./.:0:0:0:0:0/1:31:18:./.:.:.:.:.:.
chr4	7758284	HG3_Ill_GATKHC_6961	CATCGACCCGAGGGCCAGAAGGTGGGCTTGGTCTGTGCACCATCGACCCGAGGGCCAGAAGGTGGGCTTGGTCTGTGCACA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3115:HG2_PB_assemblyticsfalcon_19008:HG3_Ill_Krunchall_5789:HG3_Ill_GATKHC_6961:HG3_Ill_GATKHCSBGrefine_2795:HG3_Ill_250bpfermikitraw_5618:HG2_PB_assemblyticsPBcR_18389:HG2_Ill_SpiralSDKrefine_11957:HG2_Ill_Krunchall_5895:HG2_Ill_GATKHC_6927:HG2_Ill_GATKHCSBGrefine_2796:HG2_Ill_250bpfermikitraw_5793:HG2_PB_pbsv_4222:HG3_PB_pbsv_4122;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5793:HG2_Ill_GATKHCSBGrefine_2796:HG2_Ill_GATKHC_6927:HG2_Ill_Krunchall_5895:HG2_Ill_SpiralSDKrefine_11957:HG2_PB_assemblyticsPBcR_18389:HG3_Ill_250bpfermikitraw_5618:HG3_Ill_GATKHCSBGrefine_2795:HG3_Ill_GATKHC_6961:HG3_Ill_Krunchall_5789;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0246914;ClusterMaxSizeDiff=0.0246914;ClusterMaxEditDist=0.0869565;PBcalls=4;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-80;DistBack=36;DistForward=32744;DistMin=36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=159;REFWIDENED=4:7758169-7758407;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2717.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:37:0|1:29:2:0:33:./.:0:0:0:0:0/1:17:18:./.:.:.:.:.:.
chr4	7791109	HG4_Ill_GATKHC_7039	TCCATGCTCCGCACCAGCCCCGGCTTTCCATCCTCTTCATCCTCACCACCCCATCCGTGCATCTCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_4253:HG4_PB_assemblyticsfalcon_18611:HG3_PB_assemblyticsfalcon_18922:HG2_PB_assemblyticsfalcon_19009:HG4_PB_HySA_6294:HG4_Ill_svaba_5435:HG4_Ill_GATKHC_7039:HG4_Ill_GATKHCSBGrefine_2933:HG4_Ill_250bpfermikitraw_5870:HG4_Ill_150bpfermikitraw_5583:HG2_PB_pbsv_4223:HG2_Ill_SpiralSDKrefine_11958:HG2_Ill_GATKHC_6928:HG2_Ill_GATKHCSBGrefine_2797:HG2_Ill_250bpfermikitraw_5794:HG2_Ill_150bpfermikitraw_5366;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5366:HG2_Ill_250bpfermikitraw_5794:HG2_Ill_GATKHCSBGrefine_2797:HG2_Ill_GATKHC_6928:HG2_Ill_SpiralSDKrefine_11958:HG2_PB_pbsv_4223:HG4_Ill_150bpfermikitraw_5583:HG4_Ill_250bpfermikitraw_5870:HG4_Ill_GATKHCSBGrefine_2933:HG4_Ill_GATKHC_7039:HG4_Ill_svaba_5435:HG4_PB_HySA_6294;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0152672;ClusterMaxSizeDiff=0.0152672;ClusterMaxEditDist=0.0305344;PBcalls=6;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-65;DistBack=32744;DistForward=8623;DistMin=8623;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=383;REFWIDENED=4:7791093-7791540;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2718.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:39:./.:29:11:10:17:./.:0:0:0:0:0/1:10:14:./.:.:.:.:.:.
chr4	7898247	HG2_PB_SVrefine2PB10Xhap12_3108	AGGCTCAGTCCTCACTCCCCCCACACCCAGGGCTCAGTCCTCACTCCCCACACACCCAG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3108:HG2_PB_pbsv_4227:HG3_PB_pbsv_4124:HG2_PB_assemblyticsPBcR_18394;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3108:HG2_PB_assemblyticsPBcR_18394;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.0338983;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-58;DistBack=-229;DistForward=-59;DistMin=-229;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=129;REFWIDENED=4:7898246-7898435;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2719.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:20:0|1:27:3:3:15:./.:0:0:0:0:./.:1:2:./.:.:.:.:.:.
chr4	7995794	HG4_Ill_GATKHCSBGrefine_2936	CCAGGGAAGCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGT	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_578:HG4_PB_assemblyticsfalcon_18620:HG3_PB_assemblyticsfalcon_18929:HG2_PB_assemblyticsfalcon_19018:HG4_Ill_Krunchall_6113:HG2_Ill_Krunchall_5902:HG2_PB_pbsv_4229:HG4_PB_SVrefine2PBcRDovetail_2167:HG4_PB_SVrefine2Falcon1Dovetail_2591:HG4_Ill_SVrefine2DISCOVARDovetail_3204:HG4_Ill_MetaSV_3640:HG4_Ill_GATKHCSBGrefine_2936:HG4_10X_allpass_758:HG3_PB_SVrefine2Falcon1Dovetail_2663:HG2_PB_SVrefine2PB10Xhap12_3110:HG2_PB_SVrefine2Falcon2Bionano_2030:HG2_PB_SVrefine2Falcon1plusDovetail_8581:HG2_Ill_MetaSV_3486:HG2_Ill_GATKHCSBGrefine_2800:HG2_10X_allpass_649:HG2_10X_SVrefine210Xhap12_3120:HG4_PB_pbsv_4257:HG2_Ill_tnscope_444;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3120:HG2_10X_allpass_649:HG2_Ill_GATKHCSBGrefine_2800:HG2_Ill_MetaSV_3486:HG2_PB_SVrefine2Falcon1plusDovetail_8581:HG2_PB_SVrefine2Falcon2Bionano_2030:HG2_PB_SVrefine2PB10Xhap12_3110:HG3_PB_SVrefine2Falcon1Dovetail_2663:HG4_10X_allpass_758:HG4_Ill_GATKHCSBGrefine_2936:HG4_Ill_MetaSV_3640:HG4_Ill_SVrefine2DISCOVARDovetail_3204:HG4_PB_SVrefine2Falcon1Dovetail_2591:HG4_PB_SVrefine2PBcRDovetail_2167;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0265446;ClusterMaxSizeDiff=0.0265446;ClusterMaxEditDist=0.0265446;PBcalls=11;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1099;DistBack=13125;DistForward=-1084;DistMin=-1084;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:7995795-7996908;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:23:1|0:2:13:24:1:./.:0:0:0:0:0/1:53:21:0/1:84:42:1026:.:.
chr4	8186591	HG4_Ill_Krunchall_6115	CTTTTGTCAATCTCATGAGATTGTCGTATACATTTGTGATACAGTTAATTG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3123:HG4_PB_HySA_6302:HG2_PB_HySA_7935:HG4_Ill_svaba_5444:HG4_Ill_Krunchall_6115:HG4_Ill_GATKHC_7048:HG4_Ill_GATKHCSBGrefine_2937:HG4_Ill_250bpfermikitraw_5879:HG4_Ill_150bpfermikitraw_5591:HG3_Ill_svaba_5418:HG3_Ill_GATKHC_6970:HG3_Ill_GATKHCSBGrefine_2798:HG3_Ill_250bpfermikitraw_5625:HG2_PB_assemblyticsPBcR_18404:HG2_Ill_svaba_5328:HG2_Ill_SpiralSDKrefine_11964:HG2_Ill_GATKHC_6937:HG2_Ill_GATKHCSBGrefine_2801:HG2_Ill_250bpfermikitraw_5802:HG2_Ill_150bpfermikitraw_5373:HG4_PB_SVrefine2PBcRDovetail_2168:HG4_PB_SVrefine2Falcon1Dovetail_2592:HG4_Ill_SVrefine2DISCOVARDovetail_3206:HG3_PB_SVrefine2PBcRDovetail_1983:HG3_PB_SVrefine2Falcon1Dovetail_2664:HG2_PB_SVrefine2Falcon2Bionano_2031:HG2_PB_SVrefine2Falcon1plusDovetail_8582:HG2_Ill_SVrefine2DISCOVARplusDovetail_9234;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5373:HG2_Ill_250bpfermikitraw_5802:HG2_Ill_GATKHCSBGrefine_2801:HG2_Ill_GATKHC_6937:HG2_Ill_SpiralSDKrefine_11964:HG2_Ill_svaba_5328:HG2_PB_assemblyticsPBcR_18404:HG3_Ill_250bpfermikitraw_5625:HG3_Ill_GATKHCSBGrefine_2798:HG3_Ill_GATKHC_6970:HG3_Ill_svaba_5418:HG4_Ill_150bpfermikitraw_5591:HG4_Ill_250bpfermikitraw_5879:HG4_Ill_GATKHCSBGrefine_2937:HG4_Ill_GATKHC_7048:HG4_Ill_Krunchall_6115:HG4_Ill_svaba_5444;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.132075;PBcalls=9;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=-58;DistForward=16698;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=146;REFWIDENED=4:8186504-8186699;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2721.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:50:1/1:2:18:1:18:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr4	8539422	HG3_Ill_250bpfermikitraw_5632	GGGAAAGGGGAGCTGAGACCCTCCTAGGGCCTGAAGACATGTTCTTTCCTAATAGGAGAAGGCTGTCAGC	G	20	PASS	ClusterIDs=HG2_PB_HySA_7943:HG4_Ill_GATKHCSBGrefine_2939:HG2_PB_assemblyticsPBcR_18409:HG4_Ill_250bpfermikitraw_5886:HG3_Ill_Krunchall_5805:HG3_Ill_250bpfermikitraw_5632:HG2_Ill_Krunchall_5912:HG2_Ill_250bpfermikitraw_5810:HG3_PB_assemblyticsfalcon_18942:HG4_PB_pbsv_4261:HG3_PB_pbsv_4129:HG4_PB_HySA_6308:HG2_PB_pbsv_4232;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_5810:HG2_Ill_Krunchall_5912:HG3_Ill_250bpfermikitraw_5632:HG3_Ill_Krunchall_5805:HG4_Ill_250bpfermikitraw_5886:HG4_Ill_GATKHCSBGrefine_2939;NumExactMatchSVs=6;ClusterMaxShiftDist=0.1875;ClusterMaxSizeDiff=0.1875;ClusterMaxEditDist=0.220472;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-69;DistBack=-70;DistForward=14549;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=212;REFWIDENED=4:8539291-8539571;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2722.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:24:./.:5:16:21:7:./.:0:0:0:0:0/1:13:17:./.:.:.:.:.:.
chr4	9952290	HG2_PB_SVrefine2Falcon1plusDovetail_8589	GAAAGAAAACAGTATGGAGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCTCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACGCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3131:HG4_PB_assemblyticsfalcon_18645:HG3_PB_assemblyticsfalcon_18951:HG2_PB_assemblyticsfalcon_19045:HG2_PB_HySA_7975:HG2_PB_PB10Xdip_22764:HG2_PB_PB10Xdip_22765:HG2_PB_pbsv_4248:HG4_PB_SVrefine2PBcRDovetail_2174:HG4_PB_pbsv_4275:HG2_Ill_breakscan11_582:HG3_PB_HySA_6487:HG4_PB_SVrefine2Falcon1Dovetail_2597:HG4_Ill_svaba_5475:HG4_Ill_manta_1027:HG4_Ill_SVrefine2DISCOVARDovetail_3218:HG4_Ill_GATKHCSBGrefine_2959:HG4_10X_allpass_764:HG3_PB_pbsv_4142:HG3_PB_SVrefine2PBcRDovetail_1991:HG3_PB_SVrefine2Falcon1Dovetail_2668:HG3_Ill_svaba_5449:HG3_Ill_manta_945:HG3_Ill_SVrefine2DISCOVARDovetail_3229:HG3_Ill_GATKHCSBGrefine_2815:HG3_10X_allpass_807:HG2_PB_SVrefine2PBcRplusDovetail_7972:HG2_PB_SVrefine2PB10Xhap12_3129:HG2_PB_SVrefine2Falcon2Bionano_2038:HG2_PB_SVrefine2Falcon1plusDovetail_8589:HG2_Ill_svaba_5357:HG2_Ill_manta_1174:HG2_Ill_SpiralSDKrefine_11975:HG2_Ill_SVrefine2DISCOVARplusDovetail_9247:HG2_Ill_MetaSV_3492:HG2_Ill_GATKHCSBGrefine_2820:HG2_10X_allpass_654;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3131:HG2_PB_PB10Xdip_22765:HG4_PB_SVrefine2Falcon1Dovetail_2597:HG4_Ill_svaba_5475:HG4_Ill_manta_1027:HG4_Ill_SVrefine2DISCOVARDovetail_3218:HG4_Ill_GATKHCSBGrefine_2959:HG4_10X_allpass_764:HG3_PB_pbsv_4142:HG3_PB_SVrefine2PBcRDovetail_1991:HG3_PB_SVrefine2Falcon1Dovetail_2668:HG3_Ill_svaba_5449:HG3_Ill_manta_945:HG3_Ill_SVrefine2DISCOVARDovetail_3229:HG3_Ill_GATKHCSBGrefine_2815:HG3_10X_allpass_807:HG2_PB_SVrefine2PBcRplusDovetail_7972:HG2_PB_SVrefine2PB10Xhap12_3129:HG2_PB_SVrefine2Falcon2Bionano_2038:HG2_PB_SVrefine2Falcon1plusDovetail_8589:HG2_Ill_svaba_5357:HG2_Ill_manta_1174:HG2_Ill_SpiralSDKrefine_11975:HG2_Ill_SVrefine2DISCOVARplusDovetail_9247:HG2_Ill_MetaSV_3492:HG2_Ill_GATKHCSBGrefine_2820:HG2_10X_allpass_654;NumExactMatchSVs=27;ClusterMaxShiftDist=0.102041;ClusterMaxSizeDiff=0.102041;ClusterMaxEditDist=0.102249;PBcalls=18;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-250;DistBack=-166;DistForward=-233;DistMin=-233;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=4:9952291-9952559;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2723.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:42:0|1:18:0:2:41:./.:0:0:0:0:0/1:17:17:./.:.:.:.:.:.
chr4	9956821	HG2_Ill_MetaSV_3493	TAAAACTCCAAGTCGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_583:HG4_Ill_Krunchall_6143:HG3_Ill_Krunchall_5825:HG3_PB_HySA_6488:HG2_PB_pbsv_4249:HG4_PB_assemblyticsfalcon_18646:HG4_PB_SVrefine2Falcon1Dovetail_2598:HG4_PB_pbsv_4276:HG4_Ill_MetaSV_3650:HG2_PB_HySA_7976:HG4_Ill_manta_1028:HG4_Ill_SVrefine2DISCOVARDovetail_3219:HG4_Ill_GATKHCSBGrefine_2960:HG4_10X_allpass_765:HG3_PB_assemblyticsfalcon_18952:HG3_PB_SVrefine2PBcRDovetail_1992:HG3_PB_SVrefine2Falcon1Dovetail_2669:HG3_Ill_MetaSV_3654:HG3_Ill_GATKHCSBGrefine_2816:HG3_10X_allpass_808:HG2_PB_assemblyticsfalcon_19047:HG2_PB_SVrefine2PBcRplusDovetail_7973:HG2_PB_SVrefine2Falcon2Bionano_2039:HG2_PB_SVrefine2Falcon1plusDovetail_8590:HG2_Ill_manta_1175:HG2_Ill_SVrefine2DISCOVARplusDovetail_9248:HG2_Ill_MetaSV_3493:HG2_10X_allpass_655:HG2_10X_SVrefine210Xhap12_3132:HG3_PB_pbsv_4143:HG2_PB_SVrefine2PB10Xhap12_3130;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3132:HG2_10X_allpass_655:HG2_Ill_MetaSV_3493:HG2_Ill_SVrefine2DISCOVARplusDovetail_9248:HG2_Ill_manta_1175:HG2_PB_SVrefine2Falcon1plusDovetail_8590:HG2_PB_SVrefine2Falcon2Bionano_2039:HG2_PB_SVrefine2PBcRplusDovetail_7973:HG2_PB_assemblyticsfalcon_19047:HG3_10X_allpass_808:HG3_Ill_GATKHCSBGrefine_2816:HG3_Ill_MetaSV_3654:HG3_PB_SVrefine2Falcon1Dovetail_2669:HG3_PB_SVrefine2PBcRDovetail_1992:HG3_PB_assemblyticsfalcon_18952:HG4_10X_allpass_765:HG4_Ill_GATKHCSBGrefine_2960:HG4_Ill_SVrefine2DISCOVARDovetail_3219:HG4_Ill_manta_1028;NumExactMatchSVs=19;ClusterMaxShiftDist=0.015748;ClusterMaxSizeDiff=0.015748;ClusterMaxEditDist=0.0157978;PBcalls=15;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-9;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:9956822-9957152;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2724.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:39:0|1:24:0:1:34:./.:0:0:0:0:0/1:24:18:0/1:21:6:.:.:.
chr4	10211260	HG3_PB_SVrefine2Falcon1Dovetail_2673	ACTTTCAATTCTCTCTGCATCTTAAGTCTTCTGTTCTCTTTATTACTTGGACTTGGGCCGTGGTTGAAACCCAAGAATCCTCCTGTTAGGTGCCTATTTTGGGGAAAAAGGTCTAGGCTTATCTGTTAGTGGTGTCTGGGTAGCTACTTGCCCCCAAGAACAATAATACAGATAAGGGATGTAGACTGGGAAATAGACCCTGCTGTCGATCTTTGAGGAGTTGTGATAGTGCACGGTGAGCCCTGTGACATGAAGCTGTTCTTGCCATGGTGGGCTAGTGTCAGAGGACCAGGGGATACTTCTGGGCTTATCACACTCGCAGGGCATTGATAGGCTTCTATCTTTGTTGGTGTCCTTATCCTTTGTGACCTGTCCCTTGATAGAGAAAGTTGTATAAATTCCTCCATTTAAAAATAAATGATGCTTTAATTTCTCATGACCTGTAATGCTTCAGGGACTAAGGTTCTCATGGCTGATCTGAGTGAACTCGACGTACAGCCCAGCCTTTCTGAGCTGAAGAGACAGTCATTTGATAAGAGTGCACTTGGAGGTGATACCCCATCACCCCCAGGAGACTGGGTCCAGAAGTCTTCAGCTTCCTCTGACAGTGGAAGTGTGTATGATGGGCCCTCTGGGCACCACGGTGTCTGCTGGGCAAGCACTGGAGTGGCCACAACAAAAGTCCTTGAGCTGTGCTTGGCATCTTCCTCTGCTCATGTGAGGCCTCTTGATGACTCCGTTTCCTGGCAATGTCTCCTGTTTTTCCTAGGCCACAATGACCTTGAACGCTCCACCTTTTTATTTGTCAATAAAATGTTTATCTCTGCTTTCACCCAAGGTTTTGAAACCTTTGGGTGTGCCAGCTCTCCTGAAGTTTAAAGGCAATCTTCAGCATGAGGAACACAACATGAAGTTTCAGGGGGATGATGGCAGGCATAACCCTGGGTAGATGGGAGTGTTAATCTTAGAGAGTGGACTTATTTGTAACTAGAGCAGTGTATCATTCTAACTGAATTCAAGCCTACATCCTTCATAAATACCACTGGGGTTGAGTCACACATGATAGGGTAGTTACTATGGGATTGGTCTGTGAAAGCTGAGACCCTGAAGATGAGGGAGTTAGACCCCAGCTTGTGTGCTCACATGGAGAAGAGACCTTTGTCAGTTGATCGTTTGTTGCATGAAACATGACTCGAACGTTTCCTCTGTGTGAACACTCACTGCCAGGAAAGGTCTGGGTACTTCAGTGACTTTGTAGCTCGTATTGGTATGTGTGCAAGCCAGACTTGAAAGGGGAAGGCTGCTTCCCTACTCATGTCTAAGATGAAGTATACAACTTAAGCAGGCATCTAGAAGTGGAAAAAACATTGTTCAACCTGGTTATAGTGTCCAAAATGCTCTTGTCTTCTGCCACAAAGAGCCTGAAAGGACTTTTATCATGGGGAAGATGCCCATTTGTGTAGAAATATTTCTGGTGGTCACTAAGGACCCCATTTTCTCTAGCCATTAAGCTCTACACAACCCCAAATCTTCAGGAACTTGTGTTAATGCATTTTTCTCAGCGACAGAGCTCACAGTAGATGATTGTTTTTTCACTTTGAAGCATATCCCATATATATATATATATATAATATATATATTTTAGGTATTAGAATATATAGATCAGTGGGAAATGCCAATGAAACTGTCATGGTGAATGTCCAACTTCCTTAAATCTCTAATCTGACATTGTTACCATGGTCCAACAATTTTTGGGAAGCTGATCTTAGGGGACCCACCAATGCCTACCACAATTCTGACTTGGTGTAGTTGAAGAATATATCCTTGTTTAACTGAGTGGATCTGCTTTACATTAACTTGATCTAGAACCTGAAATCTCTATGCAGAAAGGCATATTCTGAGTCTTCGGTAGATATCAGAAGGCACCCTAACAACTGCAGTTTGACTTCAAACTCTTCAGAATATCTGGAGTCACCTGTAGAAACTAGGACTGTTTTTCGCAGGAGAGCGATGAGCTCTTGGTGCTTGTAGTGGAGTCTACAAATGCTGACATCCCTTTCGTCCAGAACTTTAACATCACTTCATTTCCATGCGTCCACGGGATGCACGGGAATGAGTTAACCTGGAGCAAAATAGAATGGAGAGCCCTCATGCAGCGACTTGTGGGGTCGGTGCAGAGAGCATCTGTGAGATGCAAGATCATAGTGTTGACCTTTCTCCTACAGATTTCTGAGCTGGGGCCAGGTGTTGGGGGCAGTGTTGGTGCTTCGTGACTCCTTGCTTCCTGTTTCCTTGAAATTCCCTAGTAATCTGGTAAAGGGGCATATGAAATCGTGAAGGTCCTTGTTGATGTCAATTCTGAGGTGGATGGCAAGCATGAATTGAGGCAAAGGTGAGGTTTCATGTCATGGATGACACAAGCTTACCAAAGAACAGGAGATGGAGACCTCAGTCCCACAGGTTTAGCAGTGTTAGAAACATTCCAAGCAGCCTTAATGCCATGGTCAGATGACCAAAGAAAGTGGTGGATGGTTCTCCATCACCAGCATCATTTGAGTGATGGCTCTTTCAGTCTTCTGCCAGGGTTGGAGAAAAGGATGCCATGTCTGGAAAACTTTCTTCTTCATCCCCCAGTGTCCTCAGTCCTGGGACATGGAGGCAGCTGGCCACCGAGGCTTAGCTGTCCACTCCTGCTTTGACATGTCTTCTCAAAATAGTACCAGCCTATGAGGCCTTAGTTGCTTGAGGTCAATCCTTTGTGCTGGCCACATTACAAAGCCTCTGCTTTTTGAGGCCAACATGGAAATTTCTCATTCCCTCTTGAAACAAAAGTACCTAGGACCCAGGATGACAATAAGAACTCATTTTATAACATGTTCTAGATTAACTGCACTGGCTTAAAGGACATAAATCATTCAGTGTACAAAGAAACTCACAGGATGACCCGGGGTGTCTCATAGGGAAGGCTATGAGTAGTCCCTGGAACTTCCTCAGTTTAGTGATTATCAGCTGAATCATCTCTAGCTGCCAATAATTGAATCATTGGTTCATCCTGGTGAACTTAGGACTTATACTAGTTCTCATATTCTTGTAGGATCAAGAATCTTTGATTTCCTGTATCACTTGTAACTCGGATTAAATGTTTGTGAAAAGCTAAGTGTCTTAGTTTGTGTTTGAGAGATGCAGACTGACACAGGCATTAGATTTACTGCTGAGTGGGCTTGGGAACTGCATGGGAAAGGAAGAAAATAAAGCATGGTTGAGAAGGGGGAGGTGAAATTGTGGGGCTGTTGCAGTAGAAGATTTGACCAACCCACAAGAAGTTCTTTAGCTAGGGTGGCCTCTAGAGCTATTAATTGACCTACCTGGCTGGCGTTTTTATTCCTTGATGAAGCCTTTGAATGTGGTTTCCCCATGGAAGTGGCATGAAATAATAGGCTGAAAATAGCTTCCATTGGAACAAAGCCATCCCCAGAGAAGGAGGCATATCTTGGAGCTTGCAGTCCAGGCATCGTCAGTGGCACAGTGTGGCACCCATCTCTGGAAGGAGGTGTTTCCTGTGTTTTTCTAGGAACAGGAAAATCCTGGCCGTGACCTTTCCCTGGGGATCTGTTGTCATCCTCATCATCTGAGGTTTCTGTTGCATCCCAGCAGACTCTGAATTCCTCAATTTCAGTACCACAGATACCTAATGGGAGAAAATGCCCCCAATATTTCAACGTAGGTTCTATTTTCCATAAGTGTCAGCCAGCTGAGAAATACAGTACAAAGAGGAATTTTACAGCTGGGCTGCTGGGGTGACGTCACATATCCGTAGTACTGTGATGCCTGCCTGAGTCTCAGACCAGCAAGTTTTTTATTAAGGGTTGCAAAAGGGGAGGGGGTGTAAGAACAGTAGGTACAAAGATCACATGCTTCAAAGAGGAAAAAGCAGAACCACTGATAAAGGGTCTAACAAAGATCACATGCTTCTGAGGGAACAAGGCAAAGGGCAAAAGCAGAACCACTGATAAGGGTCTATGTTCAGCGGTGCACGTATTGTCTTGATAAACATCTTAACAGAAAACAGGGTTTGAGAGCGGAAAACCAGTCTGACCAAAAATTTACCAGGGTTGAGTTTTCCCAACTCCAGTAAGCCTGAGTGTTCTGCAGGAGACCAGGGCATATCTCAGTCCTTATCTCAACTGTACAAGACAGACATTCCCAGAGTAGCCATTCACAGACCTCCACCCAGGGACACTTTCTTTTCCCAGAGAATTAATATTCCTTGCTGGGAAAAGAATTTAGGCATATGTTTACTACTTGTACGTCCATTTATAGGCCCTCTGCAAAAAGAAAAATAGGGCTCTTTGCCCAACCCTGCAGGCAGTCAGACTTTATGGTTGTCTTCCCGTGTTCCACAAAAATCACTATTTTTCAAGGTGCACTGATTTCATTGTTCAAACAAGTTTTACAATCAATTTGTACAGTTAACACAATTATCACAGTGGTCCTGAGGTGACGTACATCCTCAGCTTATGAAGAAAACAGGATTAAGAGATTAAAGACAGTCATAAGAAATTACAAGTGTTATTTGAGAACTGATGAATGTCCATATTAAGGTGAAATCTTCACAATTTGTTCCTCTGCCACAGCCAGTCCCTCTGTTCAGGGTCCCTGACTTCCCATAACAGATACCTACCAAGGGAAGCTCAGTTTATGAGCTGCAGGTTTGGACAAAGGCCCAACCGTGTATGACTGTGGACTTGGTTCTGCTGTCCATACGAGATGGTGAACAGCTGGCAGCAATGGAGCTGGTTCCCCTCAGGGGTTCCCCTGAGTGATATTCTTGGGAACTCTTGTTTCCATGGATACTCTGAATCTTTTGTGCCCTAATCTTTATCTGGGGACTCTAGGTATGTGAATCCAATCTCCTACTGCCACATTCGAAGTGATTACATATAGGCAACTTGGTGGTAAACCAGTGGATCAGCCAAATCCCAGGGACATAAAACTGCAGACTAGACATTGCTTTTTCCCTTGACTATCCCACAATAGCTAGTGTTTATAGAATTGAAAAATTACTCTTCCTGCCTCGTGTGTTCTAGAGTAGCCTGATACACTGTCTCATCCTTAATAATGTCTTGTAAAGAAAGTGCCTAGAATTCTTTGTGTCTGTGGTCTTGGGAGATGGCTGATGTAACTGGAAAATCAGCATGCCCTCACATCCAACTCATCAATTCTCACAACCCACATTTTCTCTGAACAGCTTAGTGGTCTTCATTTGGGCTTCAAGGTATAAGAATGAGCTATATAGGCCCGTCTCTAATCAAGTAATTCATCTGCAGATACAAATGTCCTAAGACCTCTTCCTGCTTGTCCTTGCCATGGTCAGGAATTTCTGTACTTGTTATGGGATGTTCCTCTTATTCTGAGATTGCTAGTAACAGGTGTACATCTACCCTAAGCCCTGGCTAGAAGGAGTTGTCCATTCTTGCTTATGGGAGAGGTAGCCCTGGTGGCCAGGCTGGCTTGTATATAGGTGTCAGCTTGGAAATTGGTCATAGATCTGCTAAAATCTGAGCTATTTGATCAGGGTATATCCTTGACAAACTAAGTTTTAGAAATGTCTTCTCTTCCAGGAAGACATGGCCATGGTGAGCATTGCCCTTAAGGCCATGGTTTTTTGGTTTCCTTCCTTCTAGTCAATAAATACTTGAGAATCACTATGTGCCTGGCTTTTGCTATAGTTATTCATGGTATTTTAGGTAGAATAAATACTTATGCAAGGGAATCTAAGTGGAGGAGGGAGTTTGTTCAAGTTTGCTTGGGGTAGTCTCCTGCAGAGCTCTGTGGTTACTCCCCTACAGGATGGGCTCTTCCCCATTATCCTGCTGTGTGTTGTGCACGCCTTCTAGCCAGCTTAGCTGCCTGTAAAATAGTCTGAACCTCATTAGGTGTCAGTGTGACATTGTCACCAAGTTTTAGATTATTTGCCCCAAGCAATGCTCCTGTAATCCTGGGCTATGTTGACCAGTGTAGTTCCACTTGGGACACTTCCAGTTGTGAATGTGTCTTGCCTATAGAACTGGCAAGTTACCAGCCACATGGGGACAGCTGAGCTGTCTCCTGCCATAGAGGTACCTAGACCCAGTGTTCTTGGCCTCTGTAAAGGGAAGGAGTTAAATTAACAATTGCAATTGAAACAAAGATCTGAGTCTTTTTTCATGGGTGCCCTGGTCTAATGAAGCTTAGTTTGAATTTACTCCTTTGGCTTTCATCAGGCTGTTCTGCTTCTAATTTGAGTAAAATATGCATGGTGAACAGAGCTTAGCACAGAAAAGGAACCTGGATGGGACCACAGAGCTATAGTTCTGGGGTTTGGGTCTTGTACCCAATGGTCATGTCTGACTTTCAGTGGGAAAAATGATTGGCTTGTTCCTTTCCTGCTTCTAGCTTTCTAAAATCATTAAAACTATGCCCCCGGAGGGAAGAAACAGAAGCCAAGTTGTCTTCACTGTGTACGAATATATTCTTAACCAGCAATGCGTGTGTGAGAAAGTTGTTTGGGGATACTTTGCAGAGAGGTGAAAGATGACTTAGCTCTGAGAACAAGCTCTAACAATGAAGGTAGGGCTTGTTCATCTTGATGTGCTTGTATGTCGTGAAAATGCCTATCTTAAAGGTCTCACCCGTGCTGTTGGAGGTTGTCTCCTTGTGCATCAAATTATATGCCTCCACATGGCATTGTTCTGCCTGAGACTTCTCACCCTAGTGATTACTAGAAGTCTTCATTTCTTACCAACTTCAGGGTGGATGGGAAAGACCAATTTTCTTAATCTCGATGGGACTCTAGTACCATCTTTTTATCAAAAGCAAGATAAAACTTTCTTTTACTTAAATCTGGATAGAAGGCTGGTATAACATTCTGTAGTAAAGGAGACCCTGACTTTTCTGTGGTTCACCATAAGGAGCTTCTATTCCCAAGATCATGCCATGATCCAAGATAGTTCCCTGACCCTTCTACAGGCACATCCCTTATGCTTGGCCAATGAGAAGTTTATCTTTGAATAGTTAAGTGCAGTTTTCCTAGTGAGTTGTCTCTAATCCTGAGCTTTCACAGGAATTCTAATTCCTGTGGTCTCTGGTGGGAAACATATAAAGGTACTGAACAGGATGAACTTGCTGTGAATGCAACTGTGCTGCCCTGGATGGGACTGTGTGGATATCTCTTGCACAGAGAGCTAAGAACGAGTATTAACTTGAAGCATATTGCTATACTTTTTTCACCCTCAGACTATTGAGACAAGCTGTGGAAGGGCCAATGAGTTTTGCCACCCATCCCCTACCTCTAAAATGGGCAAATCAGTGTCTTCATGAAGGAAGGAAGCTTAAAGCACTTAATGTAAGTACAATCCTGAATCACATACATGGATCCCTGGAAACAATTGAGTTGCACACCCACCCCTCTGACTGGCTTCCCCTTGGGATAGACATTGGTGAGCAAGAGCTTAGACTCTCACCAGCTGGTCACCTCCAGGGTTCACAGTCTGAGAAACTGAATCGAGTCATTTTCATCTGTCCTACAGAAGGGCTGCAAATGGGGTCTGGGGTGGCATCTTGGAGGCATCTGTGGAAGGTTCCATAGCTAGAGGCATCCTGTCTTCTGGTCCAAGCTTTCTGGCAGTGTATGGCAGACTCAACAGTTGGATAGGTTCTAGTGTTTACAGCAGTTTAGAGGAAATGTAGGCACACATTTCTGCAGGAAGAAAGCTCAGCCTATTCTGAAAGATGAATGCCCTTCCCCACAACTCCCAGGGTCTGAGGTGCTTCCTTTCCTATGTTCCTGGGGTTTTGTTTTCCAGCCACTGCCACAAAATCAGGATGTCCCATTCCAGTAGATCTACTTCACATCTTACCCCCTCCTCTGTATCCCCAAATATTTGTCTTCTAAAGAGCCAGATCTAAGGAACAAAAGCGTTTTCACAAAACCTAACCAACATTGAGTCTGAATCCTCTAGGTCTGCTCTTGCCCAGGTTGCCAGCCAGAGGGTAAGTCAACCAGGTTTTCTTAGGGTTGCTGCTAGAAAGTTCAATGTGTCATTCCCAGGGTTGGGCTGGGCAGAAACCTGAATTTGCACAGCAGGTTGGTTTTTGGTCCCAAAGGTCTGTGTAATACCATACCCGTCTTATCATTGTCCAGTAAGCTCCCAAGACAAGGTGGTATGGCCCCTCTCCGAAGGCAGCTGTACTTACTGATTTAACAGCTTTACTATGCAGTGTGGACCAGGAGGAAATAAGTGGAGTTGGCCTGCCAGGTCGCTGTTGAAGAGCTTCTGCTGAAAGGGGTATATCACCTTCAGACTGCAAGTAGCCTGGAAAGCTGAACGTCTGACGCTGACCAGTTTCAAGAGCCACGGCTGGAGTTGGGAGATATGTAACAAAGTCAACAGACAAGCCTGAGAAGACTTCAGGAGTTCCCAAGTTATCTGTCAGGAATGTGTTAGGGAGGCCATCCATGCTTCATGGGATATATGCATTTGTCTCACAGCTTTGGGCAGGAATTGTAACATGGCATGCAGGTCTAGGCTCAGCATCAGAAAACAGGTTCCATTAGCAGTTCAATTCCATTTGGTCTGATCAGAAGAGACCATCACCATGGATATTTGCATGAGTTATCCACGTAGTTCACTCACTCTCTGCAACCAGTATCCACAGTACATGGGCAGGTTTGTCTGGAAGAACCTCAAGGGTCCCATTCCAAGATACTGGAGGCCCAGAATCAGCTTAGAAAGTTATTTTCCCTTTTCTGGTCAAGTGAGGTAGAGTGCCAGCTTGTACAAATGGTCTGAACACACCACAGCACAGCTCAGCTTCAGGTAGGGCAGCGGCGGCAATTGTTAGGGTGATGGTGATATTACTAAAATAAGACAAATACTCTAGTGCCATCAAATGATCACAAACCACCAAGAACAAATACTAAGGCAGCATTCAGTGCTGCATGGAAGACTTAGTGTTCCGTGTTCCCGGCATTACCCAGCCCTAGGGAGAAGGATGATTCTTCTCTTTACTGCTATCCAGGCTGGAGAGCATCTCATGTCTATATCAAACTTCTCTCCTTTCTTCCAATGCTTGCTTGATGATTCTTCTACATAGATGTGCTCATGCCAATTTGTGTTCTTTTGTAATGGTTGGACTTGAAACTGTGTTCTCCAACCATCCACTTCCCCACCCAGTTTAATCAATTACTAGGGAACTTCCAGGCACGATGAATTGTGGTGCAGAGGTGGAGACATCTGGCCTCAGTATCCCAGATGGATCCCACAAGGGTCTATGAGGACCTGTGTGGCAGACCTGAAAGTAGTCCAAGTTGCCACTCACCACCCCACAGCCCAGGATTGACAGATCTGGTGCCTGTGTTGCTGGTGAGGCCTGCAGAGGCTCCTGCCTTAAGGCTTGGGTCCTGGTTTGGGCTTATATCGAGTTATTTAACCAGCTTAATGATACCCTCTTAAGTTGACCAATAACTCTGAACGAGTGTTTGGGTTGTTCCCTTTTCTTAACTCCTTACCCAAGAGCCATCAGTAGGATGGTCTTGAGTGTGGGTCATTGGGGAAATGGCATAGGCTTTCCCGTATGCATACAGAGCTGCTTCCTATTTAGCTTGGTGCAGGTTCCACCCATATACTGGGAGTCCCTGAACCTGAGAGGGGGGTGATCTGGATGTTTCCAGAAGTCTTAATACCTACTCTGTAGCTTGTTTGTTAAAACCTAAGTGGCTAAAATCTAAGCCATAGATTAATTGACTCTAGGTGTGACTAGAACACCTGCCTGTCCTGCCCCATAAGAAGCTGCAATGACCTTACAAATGCTAATTTTGAGGGGAAAAAGGACACAGATGTAGACTCCTAGGTCCTTTGTAGCATAGATGTGCTTTGTTTCTGTATCACCAGCAACTAGTGTGCATAAAACATCTTGGTCTCAGGGAAGCGAGGCACAAGTTAACTGGAGTGTTATCCTACTGTTGACATGACCAACAGTTTGAGTAACCAGGTAAATGAGGGTGTGGACTGATCGATGCATTCTCAATACAGCATAGGCAAGCTGGAATAGGAGCTTTCTGGTGTCTCAAAGATGAAAAACACTACCTAGATCCTGACCTTGGCCAAGGTCAGCGTCATGGTTTTAGGCACCCTTGGCATAACTGTAGAGCTACAACACACCAGCTGCAAGTTAGCTGTATCCCTATATGCCTTCTATTGCAGTGAACAAAACTAGGCTCCACTGGTATGGCACAGCAGCAATAACAAGGAAATTCCCGCCTGTGACGCATGAGAAGCATGGAACATGGGGCCTATATAAGGTCATGCTGGGAAGGGCTCACATCATACCCTGGATGTCAAACCCCTTAGTTTATGCAGGCTGTTGGGACAAAAATGCTGTACCTTGAGTGGCTTAAGCAAGTTATTTCTCAGTCTGGGAGGCTGGGAAGTCCAAGATCAGTGCAGCTGCACACGACTGATGTCCAAGCCTGCCTGCCTTCTTAGCTTATATAGACAGCTGCTTTCTTATATCCCCATATGGCTTGAGACAGGAGCCAGTCTGTGGTGTCCCTTCTCATACGGGTGCTAATCTCAAGGCGGTTCTACTCGGGGTCTAACAACCTTCCAAAGGTCTCATTTTCTAACACTATCAGGAAGATGAGGGTTCCCCTCATAAAATTCCTGGGGGGATGAACACTCCATAGCACCCTTTATCAGATGGCTTCTTCCACACCACCAGGCTATGCTGCCTGGTGAATACCTTTTCCACTGCTTTCAAGACCCCACGTTCAGTTGGGAACAGCACGAAGCTTTGGTTTTATAAAGGCCCGATGCTTGTGTCTGGTTCAGGGAGCCTCAGGGGGCTGGGCAGAACCCCAATTCCACTCCTAAGCAGCTACAGCCGAGGGCAACTCTGCAACTATCTGAGTTGATGACAAGGTGTTCAAGGCACAACTGATGGAGACTCTTTCCACATGGAGCTAGGGAGAGATTAGCCCAGTAGGTCGGATAGGTCTTGCCAGATAACAGAATGTGTACCTCATAAGCTGGGGATGGATCTGGCTAAAATAGACCCAATAGAGATGGAGGATAAATAGATTGACTGCCCTTTCATGTCTTAGTATCTAAGGGAGATTTGAGTTTGTGGTTTAGGGGGACAGATGAATGCTGAATGGCGTGGTTTTTTCCTAATGGAAAAACTGGGCAACAGGCCCTTTTAGTCCCTAGGTAACTTCTCAGGGGACAATGGGATTATGAACTAAGCACAGAATGTCTGGGTGGATTAGGTGGTCATTGACGGGTGTATTGGATTCTTTGCACTGGAGTTTAGATATTCTCAAATATGGTCCAACAAAATGTCTACAAAGCACAATGACAGTACAGCAAGTATGTGAATTGAGTTAAACAGTTGTCTTGGGGGGGATAGTTCTGGGTTTATCTGAATACTGCCATTGCTATGGCTATATCAATAGACCCCTCTGTCATATTAAATATTTCCTGGGTCACCCTTATAAAGTGAGATTCGATAACATAAGGGAAAGTTTCTTAGATGCATTCCATGTATTGTATTTGAAGATCTGGAGGACAAATAATGATGTAGTATGTTCCTCAGTCCTTGGCATTATTGGAGCTCTCCAGGAAGTAGACCGAGTGTAATAAGCAGGATGTTTATTGGGGGTGTCCTTGGACCTACATCTGTATGACTGGTAAAGCAGGACTGGGGAGAGGAACTTGAGCTGCAGGGAAGCTCTGATAGCCTCAGATAACCCCACAGGGGAGCTCTGGAGAAATGGTTTGACTTGTGATGAACTGGGCCAAAACCAGGCCTTTTTTTGATACTCATGTCTCCATCAGTCGTTGGATGTGGGCTTCTGCTGGAAAAGCATGACCTAGAACTGAGGTGGTTCTCTAGCTGAGGCCCTTCCAAATGGCTGATTACATGCCCACATGTGGAGACAAGTCACTCAAATCCGTAAAGGGGATCTTGGTGGTGTATCTCCTTGTCTACTAAAATCCATTATTTGGGCCATGTCTGATCTACTTCAAAAACTGTCAATGAAGTTCCTCCATGATTTGGATGGATTCCTCTTCCTGAGGGAAAACTCAAGAGCATGGTTAGGGAGACGAGTATTTTCCAGCTGGTCTCAAGCTTGCCACCAGTAGTCTTGTCTCTTGATCATGATGACTCTTTGCTTACCACCACCATCCTGTCTCAATTCCCATCCCCTTGGCTAGTACTTCTGTTGATCTGGTTGACTTCTGGTGGGACAATGTAGACTCAAATCTCTGGAAAGTCTGCAGTATTGGCCCCCATGTCCTTTTCGGAGAGAGGTTGCTTGCTGCCCTTACTCGTTGACTATCATGACTAGGAAAGAACTGCCCAAGAGGGTTATCTGTGCAAACACTTCTCCCTGTCCCGATCATGGCTCGGTATCCCTAGATTCTCCTAACCACAGTCAAATACTTATGACAAAATGGTGATTATACTTTCCACCTGCTCATCCCTGGACACAAAGAACTCGGTATTCCCTGACACAAGTACTCCCCTTTTGGGCTTTGTGAAGTTAGAGCTCCTGATCCCCAAAGCTGCATGAATAGGAAGTACACAGTCTTCAGGTGGACCACTGGGAGTTTTGGCAAGTGGTCTGTGTTGTGCCTCTTGGTACCAAGTATTCTGATTAGTGACAGTGCCATATAAAATTAGTCGACTCAAAATACATGTTATAATCTACAGGATGGCATTCCATCCATAGAGCATTCTGAGATGGGCCTCTAAAGATGGTTTAAAGATCATTTTAACTCTTTTGGGCCATCCACTGACCAGATACATGCCAGAAATGGTGGATTCCGTGGTTATAGGCCATGCCTGTACCTTAATCACTGAAGTGGATGTCTTGGTCTGATGGTAGTATTCAGTGGAATATCATTGGGGGATGGAATGCTCTAAGACCTCAGATAAAAGTACTGGCTAAGCCCCTGTGGGCAGAAAATTCATGTACTGGGAATGTGTTTCCCTTACTAGAACCAGTCACTGGCCCTTCTAAGATGACAAGATCCCACTGGAGTGAACTTAATAGCGAGTGGCCAGTTGGTTGGCTGCCATGAAGACTAAGCATGGATCCCACTAGCTGGCAAGTGATACGGAAGCAGTAGTAGCTAGATCAGCACTAGCAAGAGCCCTTGCAGTTGTGACCATGCATGACCTTCAACTGCAACCATGGCCCTTGTGCCCTCAGCCACCCTGTGCTGTCGGCATGGACACGTGAACAAAGGCTGGATGATGTCATCTAGCAATGTTTATCTACTTCATTCTTTACGATGACATCTGCAGTAGATGTCCTCTGGGCCTTAATGTGTGATAGATTTTCCTACTTAGTGCTAACTCGTGTCCGCTGATCTTCCACCTCAGACCTCCTTGCCCTGTCTTTCAATCTTTTCTCTTTTGCATCCCTGCCCAGTTGGCCAGGGTATTTGCCACTGCCCATGAATGCATATATATTCTGACCTTGGGACACCCAGCTTTCCACACAAAGTAGATGACCAAGACAATTTTGGAAGTGCAGCCCAGTGGGAAGATCTTTGTCATTGTCTTTCCAAGCTACCCTTGACTGAAGCTCTGGGGCAGTGGGCCCCCCTTTTTAGGCTTGTACTCATTGGAAATTAAGTTTCTTTTACCTCCTTTAGTGATCTTTAATGGATCCTATGCCTGGGCATGAGGCGGTGTAACAGCCACGTGGTATAGCTTAAATGTGTCTGGTCCTGCTCATGCTAGTCCCATGTGGGCAATTTCCAAAGAATAGGTTGCTAGGCCCATCCAACCTTGTCTTGGTGGGTCTGATGGAACCCAGCAGATGTAAAGCTGTGGCTGCATTATCACTTGCTTTGTGGTTGAGCATTCTCCCTCTATGAAGGTCTAGTTGCATGTTAGGCATTGTTTTTACAAAAGGTAACTCTTCCTGGTCATGCTTTGAGCCCCAGAAACGTGTGTGGACTCTGTGTATTTTCCAGTTGGGGTATTTCATAGTGTCCACAGGGCATTTTTTTTTTTAACTACCGATAACCCTAATATCACAATCTGGTAGGTTGTGTGGCCCAAGCTTTAGATGATCCCAGAGGCAGTTCTGGAATTGAAATTGCCTGAGTAGAAGTACAGGCTGAGAGAGCATGGCTTTCATATACCTACACTGATAGGGGCTGGACAAGATCTATCCCCAGAGGGAGTGACCTTGGGTAAAACAGCTTTCTGCAAAGAAATACCTGGAAGAGCTGATGACTGAAGACTGCAGGTGGCACTCCCAGCAGCTGGGACACTAAAGTCCTTCCTAGGTGTAGGGTCAGATAATGCCTCCGTTTTACAACCATGATCGGAACTTGCTATGCTGCTGCCCTCTGTACGTGACATCCTCTGAATCACCAATGAAAAATCATACCTGCAATGACTGACCCAGGGGTAGAAGTTTGGATGTGAAAGTTCAGAATTTTTTTCTAGCTGTCTTGTTCCAGAGGGAAGATGTTAATTAAGTTTTTTTTTTTCCTCCGGTGCTAGAACAGGGCTGCTTTCTAGAGATTCCCTTCCTTCAGTTTGAATTGATCACCTCTTCTAAATCTATATTAACCTTGACGTTCTTCACAAAGATATATATATATTTGTGACATCAGGAGCCTAAGAACAGAAGTCTTTGGATCATGGGTGACCTGGCTAGTGAAGTGGTGGCGTCCATGTGTCCTGGGGCAGTATCTCCAAAAACAACAGGGCTGAGCCTACCACAGAGGAGGAAAGTAAGCCAGGAAAACTCGTACAGCTGTCAGAGTTTTACAACCAAGTCCATGGGAAATCTGGAGGTGACATGGTAAAATACTTTCTCACTACTGTACACGGTGCTGCTTTTCTGTCACTCAGTTGCCGAATGGTGTCTTTTTTCCTTTAAGAGTTGGACATCTTGAAAAATGAGTCTTTAAATCATGTACTGTAGACTGTGTTGTGATGTACCAGGCGACTTTTAAGTCTGATCATACTTTAAGTAGACCTAAGCTTTTTGGTGGTGGCTTTACATCAACCCTGGGGCTGTTACTAGTCCCTCACTTAAACCCTCGCTTACCCCCTCTGTTTCTCTGAGCCCATGCTTGCTCACTATAGAGGCTTTTGCAGTAGGTGTAGTAGCATGAGACAGCTTTCTGGCATTGGACATTTTAAAAACCAAGAGCAAGAATTGGGGCATTTTTCTACTGAGTTATTAAGATTTTCATGTGTTCTAGTTCTATGTTGACTTTGGAGGAAATATTGGGAGATACACAGACTTTGGTAGTTGCCATTGTCTTCAGCTACTCTTACCTTTAAAAGCTGCTTTTAACGTAAGTGTGAAACACAACTTCATAATTTGGTATGAACTTCCTCATATCACAAGACAAAAGACATCTGATCCACCTTACTAGGCCGTCAGTTCTGCTGGAAATTTCCTGTAACACCTTTCTTCCTCTTTTAACACCCTTCTTCCTCAAATAAGGCAGCTTCTAAGGCTTCATAATCCCCTGAGAACTTGGTCCAGCTATCTCTGCTTCCACCTACTTGAGGGACAAGGACTGCCTAGGGTGAGCTTCCTGTTAGCAGGAGTGGCCAAGGGCTTCTTTTTGAAACAGTTGAAAGCTATGGCCTCTCTGTAGCCACACTTCCTCTGCAGGAATGACTTAACAGTGAAACTCAAGACTGGTTCTGTTTCTAAAATTATGTGGTAGGAACTTTTAAAGCAAAAGAATCTGACTTTGTAGCATGTTTATTCTTTTGATTTGCTATATGGTAAGGAGTTCATGATTGGGACTTGACATTCCAATTTATCTGACTTATAAGAACTTCCAGTTGTTAGATCCATTGATTGCCTTAAAACCGACTGACAGCACCAAATGACCAGGTTCTTAATGGAGTTTAATCGCACCCAACACTGAGTCTATTGATGGCTGCACTAATGCTAAGTCTTGTTCATCTCTTCCATATGGCTTCTCTTTGAGGTGGTTTCATCTGAAAGACTTCCTCCTGAGGTCCCTTTGAAATACCCCTTGACTAAGATGACAATGTCAGCTCCATTGAAGTTTCATGACTAAAACACATACCATGGTTATTTCATTGTGTAGTTCAGGAATTGACTCCTTGTTTACCAGGCCTTGTTGACTCTTAATACCCAATGGTCTTCAGGTGTCCTTGAGGTCCAGACTCCCCAAAGATAAAGAAGTCCTGTATCCCCAAGTAGATTTCAACTAGAGAAAAATGCGTGTCCTGAGCAATCTGGGTTCACTGATCTCTGACCTAGATCACTCTGGCAAAGGATGTGAAGTCTGGATTTCTCAGAGTAGGCTCTATCACTTTTTATTCTGTACCCTAAAACATCTCACAAGTTTCCAAACCAGAATCCATAGCTGTTTAAACATTTCCTGTTCACCTCAGGGGGCAATCCATGAGGTGTGTACAACCTTATTTACCCTGGTACTACTTGGCGAGTTTCCAGTCATGGTGTCCTTAATCTCAAGATCGGTCTGATCTATGAACATAGACAAGAGTTTTTAATTGTTTAACCAGTTTGCGGCTCCTGGGCTTATGAACAGATGAAGCAGGATTATTCTCATCCATAATGATGGAAGTGAGGAGAGACCTAAGACCTACAGGCATCATTGGTTTTGCAGGTGCAGGTTCCCCACAGGAGATGGCCTGAATGAGAAAATCTGTGTTCCTCAGGGTCTGGGACAGTTGCTTACAACTTTATGCCTTGTCATAGAAAATGGCTATAGACGGAGAAAAGGCTTCCCCAGAGAGGGCAGTATGAGAGACTGACACTTTCATGAACAAATGAGGAAAAAATGACAGAAAACCACTATTGAGGAAGGGGAGATCATTTTGAAATCATGTACTCCTGTGAAGGTCCACCAAAGTGAGATAGGCTGTGGGTATAGGGGACTATTAGATACATAGGCACTCTATGGCCCAGGATGAAGTCTGGTTGTACAGGAGTGTGAAGCTTCCAGCTGGCAGTGGATTACTTTCTTCTCTACACTCAGGAATTCTGGGACTCCAGTATTAGCCAGGGGCTAGTTGTTTAGGAGGGCAATGGCTTTTAAAGGGCCTACTTGCTCCTCTTCACCACGAGGTTCTGTGAGCATTGAACCTGGTAAGGATGTCATCCCTCTCATTTCCTGATGAATTTTAATATTCTTAAAGTTACACTGGAAAGTAATAGGAAGATTATATCTAGTTCCTTGACAGTATTTTTTTTTTACCCATGAGAAATCTCAAAAGTATTTGAGAACTGAATACCTTCCAAAGAGCTGTTTGCAAGTAATTCCGATGCTCAGCATTTCCTAGCTAAAATGACTTGGCCATTCCTTTGGTGGGTGGTTTAGTTTGGCCAATGAATTGCAGAGATAAACATCCCTTGCTCTGCAGTGCCTCTTCAGCACATGTTTAGGTGGCAATCTTTAGAAGATTAACACTTACCGTGGGTAAGCCTGTATCATTTTTGTGAGTCTTCATTAAAAGTAGGCCAAGTGCTACATCTGTGCATTGGATCTTATAACTCAAGTAGTCAAAAAGTAGAAATGATCTTGCTGCAGATGAAATGACAGTTCTATAGAAGTCTTAGGAAAAAGGGCAACAGAGCAGTTCTGAAGGACTGGTGTGTTAGGAGAGGTTTTTAGATGTTATACAAAATGAAAAAGTGACAATGCCACATGTAGTTCCCCAAAAGTACCTTTTCATCCATGCAAAACTTCAAAAGTATGAGACAATACTTTCCATCTTACTCTAAACGTTTCTAGAAGATGTATGCACATAACTCGAACTTAGATCTTAACAGTGAGCTATCCCATTACAGGGTTTTTGTATGAAATATAGTCCATTTTAACAACTTCAGATATTCTTCTCACGTGATGTGAAAGTTTGAGCATGAGTTCCTCTTCAATATCAGATCAAAATGGTCTCTTATGGGATCAGATCAAAAGTAGACTTGTCCTTATTCAGCGAGACTGAATTCCATGCTTATGGCTGCTAAAACGTCTGGAGCAAAAACATGCAAATGGTACAAAGAAGTCAGTTGTCACTGTGATAGGAAAGTGCCAAGGAGGTGTGATGCCCTAGAAATAAACTCCAGAAAGTGGTTTCAAAGGAAGGAAAGGGTCAAGTAAAACAATAAAGCAAGGATAGGACACCTGGCTTTAGCAGTGCTGAAGAGTTTGAGGTTATAGGAAGAACTGAAGAGAAGAGACGGTGTAATAAATTTCAAAGTTAGGATTGAAATAATCTTTAACAACGTCATTGAGTAGTGCCACAGGGTGCAGTCTCAGGATATTTCTGAGACCTGCAGTGTAGACCCGAGTAGAACATAATGCTGCTGTTTTAAATTCATAAATAACATAAAATCTGACATAAGTGTCCCTGGAATTCTCCCACAATATTTGTCATACTCCAGATGATAGTAGGCTAGTCTTGCAAACAGCAAGACTGGGTCTTTATCTTCTCGCTGGGACTACTCTGAATCTCATGCAACATCATGAGACCATGAATCCCAACAGGGCTTAGCATGGAGGTGGAAAGTATGTGCTGTGTTGAGGCCCACATAATAAGTTTTGTGGTGGGCACAGTGATGTGCTGCCTAGATCCCATGTCAACAGTGGAAGGCTTGTTGCCTCCACCTCTGGAAATGCTTTTAGCAGACAGCCTCAGATGATAACCCTCTATTTGTGCTTGCCTCTGTTCAAAACGGGCAATGACCCATTAGCCAGCACCTACTCAGTGTGGAAATAAGACAGCCTGGTCCTTCCACCCTAACTTTTGGAAGAACCTTAAAGGTCACACTACTTGACAGTGCCCTCCAGGGTTGGCTGAGGCCCTCACACTGCATCTTAGCTCAACTATTACCTCTGCCCAATCTTGCTTGCTTCCCTTCCTCCACAGGTGATCATCCAGAAAGCATGGCCTAATAAACATGCTGCATGAGAATATCCATCTCGGTCTGATTCCTAGGGAACCTACCCTGTGGCAGCCTGCATTCCTGCCACCTTGGTCCTGCCAGTGAGCAAGCATGGGGTGGCTTGTGAGAGTCAGTCTCTGATGTCATCAATCTTGGCTTATGTCTCTAACAGCATACTTGGTGACCACTCATGAAAATGCATACATTGATGTGATAATTCACATATTTTTTAATGCAAAGTAGACAAATGTCCTGTCTGAACGCTTGCCCATTGGGAGGGCTTCCCATTCCCTTTCAGGCTCACTGTTGTATGGGGCCGTGACTGTAACTCTCAATTTCTTAGTATTACAAGCATACTCTGCAGGATCCATCTGTACCCAGGTTTGCACACTTCTTGAGTTAATCAGAAACATCCCTAAAGGCAGCAGGTGGGTTGAGAGTTGGCAAAGCAACAAAATTTACCATGGGATTCTGAGCTGCTTGCTCATGAGATACACTGTGCCTCCCGGAGTTCAGAATTGGTCTTTGTTATTTCATGATGCACTATCATGATGCCTAATACTGTGACCTGAGCTGGCTGTCATAAACTGGATTTTACTTGAGCCACCAAGTCTCTCAGTCATGTGGTTTCCTACAGTCAGCTTCAGTCTCTAGCAGAGCCCAGCAGCAAGCCAGAGACTTTTTCAGGAGAATAGGACATGGACTTAACCACAATCTAGACAGCTAGGATTTTCACGACTGTAAGGCTGCAGATAGCGTAGACAACAGCAGTGTCTCTGAACATGCGACACCATAAGGCCCTAGTAGTAGGGCAGGCTGCATCTGTGGTCAATCCCACTCTTATTCTGGGCTCCACTTCATCTTGGCAACTTATATGTAACCTGGCAAGTGGGTCTGTTCAGTACACAAATAGGGTCTCTGTTGCCTCCAAAGTCGAAAATATGCACTAAGTATTGGGCCACCTACTTCCTGGTGAGTAGGTACAAAATACAATGTAGAAGAGATGTTCTGATGTACCCAGGCCACTGAGGCAGGCCTAACATTTTGAAGGGTAGTTATATTCTAACTTGTGGTACTAACTTCATGGCAGTGCATTTGGCTGTCACCTAGGGTGCTTGCCTCTTTCTGTCCAAGTTTAACCAAACAATGCCTTGAATGTTATGGAACAGTATAGAAGGCCCTAGGATATCAAGACCAACACTTGTGGACTCCATTGTGATGGAGCAGGACAGTTGGTATAACCATGAACTTACTGAAGCTGTGTTGTTGGCCATGCCAGGTGAAAGCAAACTATGTTGAGGAACATCAAACTAACCCTTCATATAGTCCCTTACCTTATTCTGTCTTATAACTTGTCGCCTGGATTATAACGGGTGAGTGAGGTTAAGATTTCTCAGCATTGTCTTAAAGGATTGAGAATCTTTCTCACTTGTGTTCCTTGGCTATATTTAGGAGGTACAATAAGCATCTACATGTCTCTTTAACTCAGTGTTCTCTTGCACTAGCAAGGATAAATACATCAATGTCCTAGGTACACATGTAATGGACCAACTACATGAAGTTCTATCCAATATTAGGTCAACGTGTAGGTTCCTTTCATTGACCTTTTTAAGTTGTGGTAAGAACACTTGTTCTACTCTATCAACAAACTAAGTCCACAATAGGAATTAACTACATAGTCACAAGTTCAGATCTCTAGAACTTACATGTAACTGGAACTTTTGATGCTCATTGAATAGTTCCATTGACTTCCAGTGGTTTCCGGACATACCTCATGGTAAAATGGGATCTAAGGGAATTGGAAGGCCATTGCCTGCTACAAACTACAGAACTTATTGCTGAGTTTACTCTTGCCTCAGAAGGAGGAGCAGGCATCTTTAGTGGGAGCTTCTTGTTGGTCCTGCTTTTGAGCAGGCAGTGGCTACCTGCAGCTTAGACTTCCTCTGGCAGAATCATGCAGAAACCGTAGCTGTGGAGCTAAGAATCTGAACGCTGATCCCAAATTGTTTGTTCCAGAGGTTATTGATGAATACCAGATAAAGGATTTTTCTGAATCTCAAAATGCCAGAATGTCTCTTCCTAGAAGCTAGTATATAATTAAGATTTGGGTTTCCTGGTGATTTTTTTTTTCCTGGTATTTTCCTATGATTTGGTATTCATAGAATTGGATCCATCTCTATTATCTTTTAGAAATACTTTATCTGGCAACCTATGTAATATGAATCTGAGTTAATTTCTATGACTTCTGAAAACTGATCTGTTAAAACATATACAGAAACATTGTCCCAGTGTAAGCCTGAGGGTCTTACCACCTCAGTGGATGTGAAATGTTGATGGGTAGCAGCTGCCAGCATCCTGTCCAGGAATTCTAACGTGGGTTACTTGAGGGTAAACCAGTTTTGCCAAGACAAGTTAATTTAGATGGCTGAGTTTTTGTAGATCTGAGTCAGAGCTTGAATCTCTCAATGAAGATTTGAAATGAGATTCTGGAGATGGTTACAGGACAGCTGTTATTCTAGAACCTTCCATCCTTAATGTGCTGATGATGACGCTGTTGGTGAAGGAGAATATTGAGCAGCTTTGTAGCCATGTAGGAGCACAGATTTCAAGGAAGCAATGGAAAAATGCAGCTCTATGGAGAGTATGTCATCAATTTTTTCTTTTGAAACCAACTTTATGTTCTATGTAAAAAAAAAAAAAAAAAACTCCTCTGTTTCAAAACCTCTCTTCTGAGATGCAAGAGAAATGGATAGCCTCTTGTCCACTAACTCTTATTTCTCTGCCCATCTTACGGTTCATTTACTTTCTTGTACTTCATTTATGCTGCTACTACAAAAGTACCTTAGACTGGGTAACGTGCAAGATCAATTTTTCAGTTTTAGAGATCAGGAAGTCCAAGATGAAGGTGCCAGCAGACTTGGTGTCTGAGGGCTTGCTCTCTTCAAAGATGGTGCCTTGTTGTTCGGTCCTCATGTGTTGGTCTTCATATACATATGTATCTTACCTGGTAGAAGAAACCGCCTCTCTCAAACCTCTTTTTTATGGGCGCTAATCCCATCATGAGGGCAGAGCCTAATCACCTCCTAAAGGATCCCTTAATATCCCATTTGGGGTTAAGTTCTGGCATCTGAATTTCTCAGAAACACTTAGACCAAAACACTGTGGGACCCAGAACTGCTGTCAAAACAGCCCCCTGGGAGCATGGGTCTCTTATAGAAATAGCTGTTTTTATAGGTCACTATGACATTGTTTGGGCTCTGTCCCAAGTACCAGTTGGTCTCCTTGGAGCTCTCAAACATAAACATTCATGAACATAGGTTATGGTCATGAATATTCAAGGTGATCCATAGGTCAAAGTCTACATTGGAATGGTGAGACGTTTCAGTCAGAAAAAACTGTTAGTCAAGGTTCTCCAGTGACACCAAACCAATAGAATACATGAGTTACAAATATTGGCCTATGTAATTATGGGGGCCAAGAGGCCCAAAGACATGCCATTTACAAGCTGGAGTACCTGTAAAGCTGGTAGCGTAATTTAGCCTGAGTCTGAAAACCTGAGCTGAAAGTGAACCTGCCACTCTGAGGCTGAGGGCTCAAGAACTAGGAGCTTCGATTTTCAAAGGCAGAAAATGCATGTCATGGCTCAAGAATTCACCCTTCTGACTTCTTGTTCTGGTACATGTCCATAGATGGAGCCTACTCCCCAGAACACGTTAATACAGTGACATTGTTCCAAACGTAGATTTAAAACTAGAACATGTCCCTTTTACACATGCTTAAAAACATCAGAGCTTTACATGAATTTCAGTTTGGGTTCAGTGAAAACATCTGCCCCATTTGAGCCTTTACAACTGCTAGTCTCTTTGAGTTCTGGCACTGTGAATTGTAATGGCTTGTCATTTTTTGTCTTGGATTTTATTCTTCAGTACTTTTCCATTTACAGTCTACAAACTTCTGCCAACAAACGATGGAGGTTTGGCTGTTCATCTGTTTACCTTTTGCCTCCCATGGGAAGAACAGAGTGGCTGGTCATAATTCTGTTTGTATCAAGGGTATGTCTAAGACATTTCTCAGCCTACCACTGCCCCAGCCCATTTTGGACAGATGTTCTCATCCATCCCTGTATTCCAGGAGTATGATACTGACTTTCATCCTGGCCATAGAGGGCCCTAAGAATGGGTGAGTTACTGCTCACTTATATTTATGTGTAACACTTAATGTCTGTAAAATGCACTTATCAGCAGTCCTCCTCCCACTCCTGCTCTCATAGGAAAGAGAACCAGCAAAAGTGCCTAATAGAACATGTCCCATGTCTGGTAGATCCTCAAAGCAGCC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_4283:HG4_10X_allpass_768:HG3_10X_allpass_811:HG2_10X_allpass_657:HG4_Ill_Krunchall_6146:HG3_Ill_Krunchall_5827:HG2_Ill_Krunchall_5935:HG2_PB_HySA_7985:HG2_Ill_tnscope_447:HG4_PB_SVrefine2PBcRDovetail_2178:HG4_PB_SVrefine2Falcon1Dovetail_2603:HG4_Ill_SVrefine2DISCOVARDovetail_3222:HG4_Ill_MetaSV_3653:HG3_PB_pbsv_4148:HG3_PB_SVrefine2PBcRDovetail_1996:HG3_PB_SVrefine2Falcon1Dovetail_2673:HG3_Ill_SVrefine2DISCOVARDovetail_3233:HG3_Ill_MetaSV_3656:HG2_PB_pbsv_4256:HG2_PB_SVrefine2PBcRplusDovetail_7978:HG2_PB_SVrefine2PB10Xhap12_3135:HG2_PB_SVrefine2Falcon2Bionano_2043:HG2_PB_SVrefine2Falcon1plusDovetail_8595:HG2_Ill_SVrefine2DISCOVARplusDovetail_9252:HG2_Ill_MetaSV_3496:HG2_10X_SVrefine210Xhap12_3138;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3138:HG2_Ill_MetaSV_3496:HG2_Ill_SVrefine2DISCOVARplusDovetail_9252:HG2_PB_SVrefine2Falcon1plusDovetail_8595:HG2_PB_SVrefine2Falcon2Bionano_2043:HG2_PB_SVrefine2PB10Xhap12_3135:HG2_PB_SVrefine2PBcRplusDovetail_7978:HG2_PB_pbsv_4256:HG3_Ill_MetaSV_3656:HG3_Ill_SVrefine2DISCOVARDovetail_3233:HG3_PB_SVrefine2Falcon1Dovetail_2673:HG3_PB_SVrefine2PBcRDovetail_1996:HG3_PB_pbsv_4148:HG4_Ill_MetaSV_3653:HG4_Ill_SVrefine2DISCOVARDovetail_3222:HG4_PB_SVrefine2Falcon1Dovetail_2603:HG4_PB_SVrefine2PBcRDovetail_2178;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00055788;ClusterMaxSizeDiff=0.00055788;ClusterMaxEditDist=0.00055788;PBcalls=12;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-23307;DistBack=2573;DistForward=41414;DistMin=2573;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=4:10211261-10234574;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2725.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:108:1/1:0:17:1:17:./.:0:0:0:0:1/1:0:42:1/1:0:444:23288:.:.
chr4	14206360	HG2_Ill_GATKHC_7027	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_4308:HG3_PB_HySA_6547:HG4_Ill_GATKHC_7128:HG4_Ill_GATKHCSBGrefine_2977:HG2_Ill_GATKHC_7028:HG2_Ill_GATKHCSBGrefine_2841:HG3_Ill_GATKHC_7061:HG3_Ill_GATKHCSBGrefine_2845:HG2_Ill_GATKHC_7027:HG2_Ill_GATKHCSBGrefine_2840:HG2_Ill_manta_1181:HG4_Ill_Spiral_346:HG3_Ill_manta_953:HG3_Ill_Spiral_4609:HG2_Ill_Spiral_298:HG2_PB_assemblyticsPBcR_18464:HG4_Ill_svaba_5519:HG2_Ill_svaba_5402:HG2_Ill_150bpfermikitraw_5446:HG2_10X_allpass_659:HG2_PB_assemblyticsfalcon_19096:HG4_PB_assemblyticsfalcon_18694:HG2_PB_pbsv_4280:HG3_PB_assemblyticsfalcon_18999:HG3_PB_pbsv_4172:HG2_PB_HySA_8048;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2840:HG2_Ill_GATKHC_7027:HG3_Ill_GATKHCSBGrefine_2845:HG3_Ill_GATKHC_7061;NumExactMatchSVs=4;ClusterMaxShiftDist=0.197183;ClusterMaxSizeDiff=0.197183;ClusterMaxEditDist=0.197183;PBcalls=9;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-74;DistBack=38528;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:14206359-14206436;PctSeqSimilarity=0.9744;PctSizeSimilarity=0.9865;PctRecOverlap=0.8933;SizeDiff=1;StartDistance=7;EndDistance=8;GTMatch=0;TruScore=95;MatchId=2726.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:81:1/1:5:38:3:29:./.:0:0:0:0:0/1:3:17:./.:.:.:.:.:.
chr4	14493324	HG2_Ill_150bpfermikitraw_5451	ATATATAAATACATTTATGTATATAAATACATTTATATATGAATATATTTATATTCATATATAAATACATTTATG	A	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_5451:HG3_Ill_Krunchall_5868:HG4_Ill_svaba_5523:HG4_Ill_manta_1038:HG4_Ill_250bpfermikitraw_5948:HG4_Ill_150bpfermikitraw_5662:HG3_Ill_svaba_5502:HG3_Ill_manta_955:HG2_Ill_svaba_5408:HG2_Ill_manta_1182:HG2_Ill_SpiralSDKrefine_12006:HG2_Ill_250bpfermikitraw_5876;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5451:HG4_Ill_svaba_5523:HG4_Ill_manta_1038:HG4_Ill_250bpfermikitraw_5948:HG4_Ill_150bpfermikitraw_5662:HG3_Ill_svaba_5502:HG3_Ill_manta_955:HG2_Ill_svaba_5408:HG2_Ill_manta_1182:HG2_Ill_SpiralSDKrefine_12006:HG2_Ill_250bpfermikitraw_5876;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0408163;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.0408163;PBcalls=0;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-74;DistBack=29;DistForward=-61;DistMin=-61;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=165;REFWIDENED=4:14493206-14493444;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2727.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:31:0|1:34:4:4:25:./.:0:0:0:0:0/1:37:22:./.:.:.:.:.:.
chr4	16426943	HG2_Ill_GATKHC_7053	CATATATATATGTGTATATATATATATATATATATATATATATATATATATATATAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3162:HG3_PB_pbsv_4187:HG2_PB_pbsv_4295:HG3_PB_HySA_6574:HG4_PB_assemblyticsfalcon_18714:HG3_PB_assemblyticsfalcon_19024:HG3_Ill_svaba_5528:HG3_Ill_scalpel_4259:HG3_Ill_manta_962:HG3_Ill_Krunchall_5894:HG3_Ill_GATKHC_7090:HG3_Ill_GATKHCSBGrefine_2855:HG3_Ill_250bpfermikitraw_5706:HG3_Ill_150bpfermikitraw_5524:HG3_10X_allpass_815:HG2_Ill_svaba_5425:HG2_Ill_scalpel_4165:HG2_Ill_manta_1186:HG2_Ill_breakscan11_584:HG2_Ill_SpiralSDKrefine_12021:HG2_Ill_Krunchall_6002:HG2_Ill_GATKHC_7053:HG2_Ill_GATKHCSBGrefine_2848:HG2_Ill_250bpfermikitraw_5898:HG2_Ill_150bpfermikitraw_5473;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5473:HG2_Ill_250bpfermikitraw_5898:HG2_Ill_GATKHCSBGrefine_2848:HG2_Ill_GATKHC_7053:HG2_Ill_Krunchall_6002:HG2_Ill_SpiralSDKrefine_12021:HG2_Ill_breakscan11_584:HG2_Ill_manta_1186:HG2_Ill_scalpel_4165:HG2_Ill_svaba_5425:HG3_10X_allpass_815:HG3_Ill_150bpfermikitraw_5524:HG3_Ill_250bpfermikitraw_5706:HG3_Ill_GATKHCSBGrefine_2855:HG3_Ill_GATKHC_7090:HG3_Ill_Krunchall_5894:HG3_Ill_manta_962:HG3_Ill_scalpel_4259:HG3_Ill_svaba_5528:HG3_PB_assemblyticsfalcon_19024:HG4_PB_assemblyticsfalcon_18714;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0530973;PBcalls=5;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=5000;DistForward=56344;DistMin=5000;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=4:16426936-16427009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:36:0|1:29:0:1:33:./.:0:0:0:0:0/1:17:17:./.:.:.:.:.:.
chr4	16812184	HG3_Ill_scalpel_4263	TAAAAGGTTTTCAGAGAGGTTCATGGAAGATCCAGGGGGTCTATGAACACCCCAAACAGGAATTGAACTGGGGTTCAAATTCATGGTTATGGATCTTATTTGAAAAGTTGATGAAAACTATTAATACCGCCCTTAGAAAGACGAACAGTTATCAAATCAGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3164:HG3_PB_HySA_6577:HG3_PB_pbsv_4188:HG2_PB_HySA_8076:HG4_Ill_Krunchall_6213:HG4_PB_HySA_6404:HG2_PB_pbsv_4297:HG4_Ill_MetaSV_3657:HG4_Ill_svaba_5547:HG4_Ill_scalpel_4089:HG4_Ill_GATKHC_7158:HG4_Ill_GATKHCSBGrefine_2988:HG4_Ill_250bpfermikitraw_5972:HG4_Ill_150bpfermikitraw_5682:HG4_10X_allpass_774:HG3_Ill_svaba_5533:HG3_Ill_scalpel_4263:HG3_Ill_GATKHC_7093:HG3_Ill_GATKHCSBGrefine_2856:HG3_Ill_250bpfermikitraw_5711:HG3_Ill_150bpfermikitraw_5529:HG3_10X_allpass_816:HG2_Ill_svaba_5429:HG2_Ill_scalpel_4168:HG2_Ill_SpiralSDKrefine_12022:HG2_Ill_GATKHC_7055:HG2_Ill_GATKHCSBGrefine_2849:HG2_Ill_250bpfermikitraw_5902:HG2_Ill_150bpfermikitraw_5475:HG2_10X_allpass_660:HG4_PB_pbsv_4320:HG4_PB_SVrefine2PBcRDovetail_2195:HG4_PB_SVrefine2Falcon1Dovetail_2630:HG4_Ill_SVrefine2DISCOVARDovetail_3253:HG3_PB_SVrefine2Falcon1Dovetail_2702:HG3_Ill_SVrefine2DISCOVARDovetail_3254:HG2_PB_SVrefine2PBcRplusDovetail_8002:HG2_PB_SVrefine2PB10Xhap12_3161:HG2_PB_SVrefine2Falcon2Bionano_2062:HG2_PB_SVrefine2Falcon1plusDovetail_8620:HG2_Ill_SVrefine2DISCOVARplusDovetail_9280;NumClusterSVs=41;ExactMatchIDs=HG2_10X_allpass_660:HG2_Ill_150bpfermikitraw_5475:HG2_Ill_250bpfermikitraw_5902:HG2_Ill_GATKHCSBGrefine_2849:HG2_Ill_GATKHC_7055:HG2_Ill_SpiralSDKrefine_12022:HG2_Ill_scalpel_4168:HG2_Ill_svaba_5429:HG3_10X_allpass_816:HG3_Ill_150bpfermikitraw_5529:HG3_Ill_250bpfermikitraw_5711:HG3_Ill_GATKHCSBGrefine_2856:HG3_Ill_GATKHC_7093:HG3_Ill_scalpel_4263:HG3_Ill_svaba_5533:HG4_10X_allpass_774:HG4_Ill_150bpfermikitraw_5682:HG4_Ill_250bpfermikitraw_5972:HG4_Ill_GATKHCSBGrefine_2988:HG4_Ill_GATKHC_7158:HG4_Ill_scalpel_4089:HG4_Ill_svaba_5547;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0124224;ClusterMaxSizeDiff=0.0124224;ClusterMaxEditDist=0.0743034;PBcalls=13;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=14;NumTechs=3;NumTechsExact=2;SVLEN=-160;DistBack=55008;DistForward=-81;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=155;REFWIDENED=4:16812111-16812425;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2730.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:85:1/1:0:11:0:26:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr4	16899521	HG2_Ill_GATKHC_7056	ATATATATATATATATATATATATATATATATATATATATACACATATGTATATAT	A	20	PASS	ClusterIDs=HG2_Ill_scalpel_4169:HG2_Ill_SpiralSDKrefine_12023:HG4_Ill_GATKHC_7159:HG4_Ill_GATKHCSBGrefine_2989:HG2_Ill_GATKHC_7056:HG2_Ill_GATKHCSBGrefine_2850:HG4_Ill_manta_1042:HG2_PB_pbsv_4298:HG4_PB_pbsv_4321:HG4_Ill_250bpfermikitraw_5973;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_2850:HG2_Ill_GATKHC_7056:HG4_Ill_GATKHCSBGrefine_2989:HG4_Ill_GATKHC_7159;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0917431;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.0917431;PBcalls=2;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-55;DistBack=10865;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=41;REFWIDENED=4:16899521-16899617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2731.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:21:0|1:21:2:0:19:./.:0:0:0:0:0/1:19:29:./.:.:.:.:.:.
chr4	17202756	HG2_PB_SVrefine2Falcon2Bionano_2063	TTATCCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTTAGCCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3501:HG4_PB_assemblyticsfalcon_18722:HG3_PB_assemblyticsfalcon_19031:HG2_PB_assemblyticsPBcR_18490:HG2_PB_assemblyticsfalcon_19123:HG4_Ill_Krunchall_6220:HG2_Ill_Krunchall_6011:HG4_Ill_Spiral_347:HG3_Ill_Spiral_4635:HG3_PB_HySA_6580:HG4_PB_pbsv_4323:HG4_PB_SVrefine2PBcRDovetail_2197:HG4_PB_SVrefine2Falcon1Dovetail_2632:HG4_Ill_svaba_5552:HG4_Ill_scalpel_4093:HG4_Ill_manta_1043:HG4_Ill_SVrefine2DISCOVARDovetail_3257:HG4_Ill_GATKHCSBGrefine_2990:HG4_10X_allpass_775:HG3_PB_pbsv_4190:HG3_PB_SVrefine2Falcon1Dovetail_2704:HG3_Ill_svaba_5537:HG3_Ill_scalpel_4266:HG3_Ill_manta_963:HG3_Ill_SVrefine2DISCOVARDovetail_3257:HG3_Ill_GATKHCSBGrefine_2858:HG3_10X_allpass_817:HG2_PB_pbsv_4299:HG2_PB_SVrefine2PBcRplusDovetail_8003:HG2_PB_SVrefine2PB10Xhap12_3162:HG2_PB_SVrefine2Falcon2Bionano_2063:HG2_PB_SVrefine2Falcon1plusDovetail_8621:HG2_Ill_svaba_5434:HG2_Ill_scalpel_4174:HG2_Ill_manta_1187:HG2_Ill_SVrefine2DISCOVARplusDovetail_9281:HG2_Ill_GATKHCSBGrefine_2851:HG2_10X_allpass_661:HG2_10X_SVrefine210Xhap12_3166:HG2_Ill_breakscan11_585:HG4_Ill_MetaSV_3659:HG3_Ill_MetaSV_3663:HG2_Ill_tnscope_448;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3166:HG2_10X_allpass_661:HG2_Ill_GATKHCSBGrefine_2851:HG2_Ill_SVrefine2DISCOVARplusDovetail_9281:HG2_Ill_manta_1187:HG2_Ill_scalpel_4174:HG2_Ill_svaba_5434:HG2_PB_SVrefine2Falcon1plusDovetail_8621:HG2_PB_SVrefine2Falcon2Bionano_2063:HG2_PB_SVrefine2PB10Xhap12_3162:HG2_PB_SVrefine2PBcRplusDovetail_8003:HG2_PB_pbsv_4299:HG3_10X_allpass_817:HG3_Ill_GATKHCSBGrefine_2858:HG3_Ill_SVrefine2DISCOVARDovetail_3257:HG3_Ill_manta_963:HG3_Ill_scalpel_4266:HG3_Ill_svaba_5537:HG3_PB_SVrefine2Falcon1Dovetail_2704:HG3_PB_pbsv_4190:HG4_10X_allpass_775:HG4_Ill_GATKHCSBGrefine_2990:HG4_Ill_SVrefine2DISCOVARDovetail_3257:HG4_Ill_manta_1043:HG4_Ill_scalpel_4093:HG4_Ill_svaba_5552:HG4_PB_SVrefine2Falcon1Dovetail_2632:HG4_PB_SVrefine2PBcRDovetail_2197:HG4_PB_pbsv_4323;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0554649;ClusterMaxSizeDiff=0.0554649;ClusterMaxEditDist=0.0554649;PBcalls=15;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=8581;DistForward=63206;DistMin=8581;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=4:17202757-17203075;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2732.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:90:1/1:0:40:1:29:./.:0:0:0:0:1/1:0:36:./.:1:17:.:.:.
chr4	17394364	HG3_10X_allpass_818	AAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_19124:HG4_PB_HySA_6409:HG4_Ill_GATKHC_7168:HG4_Ill_GATKHCSBGrefine_2992:HG3_Ill_GATKHC_7100:HG3_Ill_GATKHCSBGrefine_2860:HG2_Ill_GATKHC_7063:HG2_Ill_GATKHCSBGrefine_2853:HG4_Ill_manta_1044:HG3_Ill_manta_964:HG2_Ill_manta_1188:HG3_PB_pbsv_4191:HG2_PB_pbsv_4300:HG2_PB_assemblyticsPBcR_18491:HG4_Ill_svaba_5555:HG4_Ill_150bpfermikitraw_5690:HG3_Ill_svaba_5540:HG3_Ill_150bpfermikitraw_5535:HG3_10X_allpass_818:HG2_Ill_svaba_5437:HG2_Ill_Krunchall_6013:HG2_Ill_150bpfermikitraw_5483:HG3_PB_HySA_6581:HG2_PB_HySA_8079:HG4_PB_pbsv_4324;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5483:HG2_Ill_Krunchall_6013:HG2_Ill_svaba_5437:HG3_10X_allpass_818:HG3_Ill_150bpfermikitraw_5535:HG3_Ill_svaba_5540:HG4_Ill_150bpfermikitraw_5690:HG4_Ill_svaba_5555;NumExactMatchSVs=8;ClusterMaxShiftDist=0.110236;ClusterMaxSizeDiff=0.110236;ClusterMaxEditDist=0.110236;PBcalls=8;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-65;DistBack=128029;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=67;REFWIDENED=4:17394365-17394496;PctSeqSimilarity=0.9846;PctSizeSimilarity=0.9692;PctRecOverlap=0.9697;SizeDiff=2;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=97;MatchId=2733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:./.:0:2:0:25:./.:0:0:0:0:1/1:0:10:./.:.:.:.:.:.
chr4	19079450	HG2_10X_SVrefine210Xhap12_3171	ACCACTGATTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTATTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTATTATACTCTCAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCAGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGACTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAAAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGTTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCCTCTAGGGTTTTTATGGTTTTAGGTCTAACATTTAAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAAGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGATGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCATCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGCTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTCGTTGGTTTGAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGTGATTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCTGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAAGTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTAGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTATTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTACGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTTGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTATTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_586:HG2_PB_assemblyticsPBcR_18503:HG3_Ill_Krunchall_5911:HG2_Ill_Krunchall_6024:HG2_Ill_tnscope_449:HG3_PB_pbsv_4201:HG3_PB_SVrefine2Falcon1Dovetail_2715:HG3_Ill_SVrefine2DISCOVARDovetail_3270:HG3_Ill_MetaSV_3665:HG3_Ill_GATKHCSBGrefine_2864:HG2_PB_pbsv_4310:HG2_PB_SVrefine2PBcRplusDovetail_8009:HG2_PB_SVrefine2PB10Xhap12_3170:HG2_PB_SVrefine2Falcon2Bionano_2067:HG2_Ill_GATKHCSBGrefine_2856:HG2_10X_SVrefine210Xhap12_3171:HG2_Ill_MetaSV_3503;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3171:HG2_Ill_GATKHCSBGrefine_2856:HG2_PB_SVrefine2Falcon2Bionano_2067:HG2_PB_SVrefine2PB10Xhap12_3170:HG2_PB_SVrefine2PBcRplusDovetail_8009:HG2_PB_pbsv_4310:HG3_Ill_GATKHCSBGrefine_2864:HG3_Ill_MetaSV_3665:HG3_Ill_SVrefine2DISCOVARDovetail_3270:HG3_PB_SVrefine2Falcon1Dovetail_2715:HG3_PB_pbsv_4201;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0213181;ClusterMaxSizeDiff=0.0213181;ClusterMaxEditDist=0.0213181;PBcalls=7;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-6100;DistBack=65448;DistForward=-6085;DistMin=-6085;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:19079451-19085565;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2735.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:72:0|1:35:6:2:18:./.:0:0:0:0:0/1:34:21:0/1:390:196:6102:.:.
chr4	19130565	HG2_Ill_250bpfermikitraw_5921	TACAGATATAAACTATTATATCTGGAACAGATATAAACTATTATATCTGGA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2068:HG4_PB_HySA_6425:HG2_PB_HySA_8097:HG2_Ill_SpiralSDKrefine_12034:HG2_Ill_GATKHCSBGrefine_2857:HG2_Ill_250bpfermikitraw_5921:HG2_Ill_150bpfermikitraw_5494;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5494:HG2_Ill_250bpfermikitraw_5921:HG2_Ill_GATKHCSBGrefine_2857:HG2_Ill_SpiralSDKrefine_12034;NumExactMatchSVs=4;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.178571;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=-26;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=127;REFWIDENED=4:19130526-19130702;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2736.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:40:0|1:31:10:0:24:./.:0:0:0:0:0/1:40:27:./.:.:.:.:.:.
chr4	19643112	HG2_PB_SVrefine2PBcRplusDovetail_8010	TAACAGATGTCCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3173:HG2_10X_allpass_662:HG2_PB_assemblyticsfalcon_19143:HG4_Ill_Krunchall_6239:HG2_PB_pbsv_4314:HG2_Ill_Krunchall_6028:HG4_PB_assemblyticsfalcon_18738:HG3_PB_assemblyticsfalcon_19060:HG2_PB_assemblyticsPBcR_18507:HG4_Ill_Spiral_348:HG2_Ill_Spiral_299:HG2_PB_HySA_8107:HG4_PB_pbsv_4340:HG4_Ill_MetaSV_3666:HG2_Ill_tnscope_450:HG2_Ill_MetaSV_3504:HG4_PB_SVrefine2PBcRDovetail_2205:HG4_PB_SVrefine2Falcon1Dovetail_2643:HG4_Ill_scalpel_4105:HG4_Ill_manta_1048:HG4_Ill_SVrefine2DISCOVARDovetail_3264:HG4_Ill_GATKHCSBGrefine_3000:HG4_10X_allpass_777:HG3_PB_SVrefine2Falcon1Dovetail_2725:HG2_PB_SVrefine2PBcRplusDovetail_8010:HG2_PB_SVrefine2PB10Xhap12_3172:HG2_PB_SVrefine2Falcon1plusDovetail_8632:HG2_Ill_manta_1189:HG2_Ill_breakscan11_587:HG2_Ill_SVrefine2DISCOVARplusDovetail_9293:HG2_Ill_GATKHCSBGrefine_2858;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3173:HG4_PB_SVrefine2PBcRDovetail_2205:HG4_PB_SVrefine2Falcon1Dovetail_2643:HG4_Ill_scalpel_4105:HG4_Ill_manta_1048:HG4_Ill_SVrefine2DISCOVARDovetail_3264:HG4_Ill_GATKHCSBGrefine_3000:HG4_10X_allpass_777:HG3_PB_SVrefine2Falcon1Dovetail_2725:HG2_PB_SVrefine2PBcRplusDovetail_8010:HG2_PB_SVrefine2PB10Xhap12_3172:HG2_PB_SVrefine2Falcon1plusDovetail_8632:HG2_Ill_manta_1189:HG2_Ill_breakscan11_587:HG2_Ill_SVrefine2DISCOVARplusDovetail_9293:HG2_Ill_GATKHCSBGrefine_2858;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0744048;ClusterMaxSizeDiff=0.0744048;ClusterMaxEditDist=0.0744048;PBcalls=13;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-341;DistBack=72570;DistForward=-331;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:19643113-19643466;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2737.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:24:./.:21:2:6:17:./.:0:0:0:0:0/1:20:16:0/1:33:5:.:.:.
chr4	20085982	HG3_Ill_250bpfermikitraw_5739	AAATTATATATTATATATAAATATATATATATAAATTAATAATTATATATTATATATAAATATATATATATAAATTAAT	A	20	PASS	ClusterIDs=HG2_10X_allpass_663:HG2_Ill_GATKHCSBGrefine_2862:HG2_PB_pbsv_4317:HG3_PB_pbsv_4210:HG3_Ill_scalpel_4279:HG3_Ill_250bpfermikitraw_5739:HG3_Ill_150bpfermikitraw_5558:HG2_Ill_scalpel_4184:HG2_Ill_manta_1191:HG2_Ill_250bpfermikitraw_5928:HG2_Ill_150bpfermikitraw_5502;NumClusterSVs=11;ExactMatchIDs=HG2_10X_allpass_663:HG3_Ill_scalpel_4279:HG3_Ill_250bpfermikitraw_5739:HG3_Ill_150bpfermikitraw_5558:HG2_Ill_scalpel_4184:HG2_Ill_manta_1191:HG2_Ill_250bpfermikitraw_5928:HG2_Ill_150bpfermikitraw_5502;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0387097;ClusterMaxSizeDiff=0.0387097;ClusterMaxEditDist=0.0387097;PBcalls=2;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-78;DistBack=4408;DistForward=-60;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=4:20085981-20086091;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2738.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:0|1:26:0:4:19:./.:0:0:0:0:0/1:16:11:./.:.:.:.:.:.
chr4	20933495	HG2_PB_SVrefine2PBcRplusDovetail_8013	GATAATAGTCTATAAGAGTCTAATATTGTAGACTATAATAGTCTATAACAGTCTAATATTGTAGACTATAATAGTCTATAACAGTCTAATATTGTAGACTATAATAGTCTATAACAGTCTAATATTGTAGACTATAATAGTCTATAACAGTCTAATATTGTAGACAATAATAGTCTATAACAGTCTAATATTGTAGACTATAATAGTCTATAACAGTCTAATATTGTAGACTATAATAGTCTATAACAGTCTAATATTGTAGACTATAATAGTCTATAACAGTCTAATATTGTAGACT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8635:HG4_10X_allpass_779:HG3_PB_HySA_6623:HG4_PB_pbsv_4346:HG2_PB_pbsv_4321:HG3_PB_pbsv_4213:HG4_PB_SVrefine2Falcon1Dovetail_2645:HG2_PB_SVrefine2PBcRplusDovetail_8013:HG2_PB_SVrefine2PB10Xhap12_3176:HG2_PB_SVrefine2Falcon2Bionano_2074;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8635:HG4_PB_SVrefine2Falcon1Dovetail_2645:HG2_PB_SVrefine2PBcRplusDovetail_8013:HG2_PB_SVrefine2PB10Xhap12_3176:HG2_PB_SVrefine2Falcon2Bionano_2074;NumExactMatchSVs=5;ClusterMaxShiftDist=0.147105;ClusterMaxSizeDiff=0.147105;ClusterMaxEditDist=0.147105;PBcalls=9;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-297;DistBack=-232;DistForward=-298;DistMin=-298;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=340;REFWIDENED=4:20933496-20934132;PctSeqSimilarity=0.9949;PctSizeSimilarity=1;PctRecOverlap=0.8389;SizeDiff=0;StartDistance=-48;EndDistance=-48;GTMatch=0;TruScore=94;MatchId=2739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:0:20:3:16:./.:0:0:0:0:0/1:3:11:./.:.:.:.:.:.
chr4	21160986	HG3_Ill_SVrefine2DISCOVARDovetail_3283	TAGAAAATTATACTAAAGATATGTTTGAGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCCGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGATGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGTGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAACCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAACTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTTTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCTCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAATCATATGTTTGAAAGCATCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_4322:HG4_Ill_Krunchall_6251:HG3_Ill_Krunchall_5932:HG4_10X_allpass_780:HG4_PB_pbsv_4347:HG2_PB_assemblyticsfalcon_19157:HG4_PB_assemblyticsfalcon_18746:HG2_PB_assemblyticsPBcR_18522:HG4_Ill_Krunchall_6250:HG3_10X_allpass_821:HG2_PB_SVrefine2Falcon1plusDovetail_8636:HG2_Ill_tnscope_451:HG4_PB_SVrefine2PBcRDovetail_2210:HG4_PB_SVrefine2Falcon1Dovetail_2646:HG4_Ill_SVrefine2DISCOVARDovetail_3273:HG4_Ill_MetaSV_3668:HG4_Ill_GATKHCSBGrefine_3008:HG3_PB_pbsv_4214:HG3_Ill_SVrefine2DISCOVARDovetail_3283:HG3_Ill_MetaSV_3668:HG3_Ill_GATKHCSBGrefine_2872:HG2_PB_SVrefine2PBcRplusDovetail_8014:HG2_PB_SVrefine2PB10Xhap12_3177:HG2_PB_SVrefine2Falcon2Bionano_2075:HG2_Ill_breakscan11_588:HG2_Ill_SVrefine2DISCOVARplusDovetail_9299:HG2_Ill_MetaSV_3505:HG2_Ill_GATKHCSBGrefine_2866:HG2_10X_SVrefine210Xhap12_3176;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3176:HG2_Ill_GATKHCSBGrefine_2866:HG2_Ill_MetaSV_3505:HG2_Ill_SVrefine2DISCOVARplusDovetail_9299:HG2_Ill_breakscan11_588:HG2_PB_SVrefine2Falcon2Bionano_2075:HG2_PB_SVrefine2PB10Xhap12_3177:HG2_PB_SVrefine2PBcRplusDovetail_8014:HG3_Ill_GATKHCSBGrefine_2872:HG3_Ill_MetaSV_3668:HG3_Ill_SVrefine2DISCOVARDovetail_3283:HG3_PB_pbsv_4214:HG4_Ill_GATKHCSBGrefine_3008:HG4_Ill_MetaSV_3668:HG4_Ill_SVrefine2DISCOVARDovetail_3273:HG4_PB_SVrefine2Falcon1Dovetail_2646:HG4_PB_SVrefine2PBcRDovetail_2210;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00507864;ClusterMaxSizeDiff=0.00507864;ClusterMaxEditDist=0.00507864;PBcalls=12;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-6111;DistBack=11423;DistForward=-6111;DistMin=-6111;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:21160987-21167113;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2740.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:54:0|1:40:0:0:25:./.:0:0:0:0:0/1:28:14:0/1:356:224:6166:.:.
chr4	21694731	HG2_10X_SVrefine210Xhap12_3180	CCAGACAGAGTGGTGGCCTTGAGTACAGGAATATAGCCTACCCACAGAGGCCTGTTAGGAAGAAAGCTCAGGGAAGAAAAAAATGCTGGTCTCATTTTCCTCCTACTTTCAGAGTTTCTG	AC	20	PASS	ClusterIDs=HG4_PB_pbsv_4354:HG4_Ill_GATKHC_7212:HG4_Ill_GATKHCSBGrefine_3011:HG4_CG_vcfBeta_2862:HG2_Ill_GATKHC_7113:HG2_Ill_GATKHCSBGrefine_2869:HG2_CG_vcfBeta_2564:HG4_Ill_svaba_5595:HG4_Ill_scalpel_4115:HG4_Ill_250bpfermikitraw_6011:HG4_Ill_150bpfermikitraw_5725:HG4_10X_allpass_781:HG2_Ill_svaba_5478:HG2_Ill_scalpel_4196:HG2_Ill_SpiralSDKrefine_12053:HG4_PB_SVrefine2PBcRDovetail_2213:HG4_PB_SVrefine2Falcon1Dovetail_2651:HG4_Ill_manta_1053:HG4_Ill_SVrefine2DISCOVARDovetail_3276:HG2_PB_SVrefine2PB10Xhap12_3181:HG2_PB_PB10Xdip_22087:HG2_PB_PB10Xdip_22086:HG2_Ill_manta_1193:HG2_10X_SVrefine210Xhap12_3180:HG4_Ill_MetaSV_3669:HG2_Ill_MetaSV_3506:HG2_PB_assemblyticsPBcR_18532:HG2_PB_SVrefine2PBcRplusDovetail_8017:HG4_Ill_Spiral_349:HG2_Ill_Spiral_300:HG2_PB_pbsv_4328:HG4_PB_assemblyticsfalcon_18756:HG4_Ill_Krunchall_6256;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3180:HG2_Ill_manta_1193:HG2_PB_PB10Xdip_22086:HG2_PB_PB10Xdip_22087:HG2_PB_SVrefine2PB10Xhap12_3181:HG4_Ill_SVrefine2DISCOVARDovetail_3276:HG4_Ill_manta_1053:HG4_PB_SVrefine2Falcon1Dovetail_2651:HG4_PB_SVrefine2PBcRDovetail_2213;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0508475;ClusterMaxSizeDiff=0.0508475;ClusterMaxEditDist=0.0508475;PBcalls=10;Illcalls=19;TenXcalls=2;CGcalls=2;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=17;NumTechs=4;NumTechsExact=3;SVLEN=-118;DistBack=9661;DistForward=21559;DistMin=9661;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:21694731-21694850;PctSeqSimilarity=0.9958;PctSizeSimilarity=1;PctRecOverlap=0.9917;SizeDiff=0;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:44:31:0|1:43:1:1:26:./.:0:0:0:0:0/1:40:7:./.:.:.:.:.:.
chr4	21716410	HG3_Ill_SVrefine2DISCOVARDovetail_3291	TTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTT	G	20	PASS	ClusterIDs=HG3_PB_pbsv_4220:HG2_PB_assemblyticsfalcon_19169:HG3_Ill_GATKHCSBGrefine_2876:HG3_10X_allpass_822:HG2_PB_SVrefine2Falcon1plusDovetail_8640:HG2_Ill_GATKHCSBGrefine_2870:HG2_10X_allpass_664:HG2_Ill_SpiralSDKrefine_12054:HG3_Ill_MetaSV_3669:HG4_PB_SVrefine2Falcon1Dovetail_2652:HG3_Ill_SVrefine2DISCOVARDovetail_3291:HG2_PB_SVrefine2PBcRplusDovetail_8018:HG2_PB_SVrefine2PB10Xhap12_3182:HG2_PB_SVrefine2Falcon2Bionano_2079:HG2_10X_SVrefine210Xhap12_3181:HG3_Ill_Krunchall_5944:HG2_Ill_Krunchall_6051:HG2_PB_pbsv_4329:HG2_Ill_tnscope_452;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3181:HG2_PB_SVrefine2Falcon2Bionano_2079:HG2_PB_SVrefine2PB10Xhap12_3182:HG2_PB_SVrefine2PBcRplusDovetail_8018:HG3_Ill_SVrefine2DISCOVARDovetail_3291:HG4_PB_SVrefine2Falcon1Dovetail_2652;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0393701;ClusterMaxSizeDiff=0.0393701;ClusterMaxEditDist=0.0393701;PBcalls=8;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-250;DistBack=21559;DistForward=-249;DistMin=-249;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=60;REFWIDENED=4:21716411-21716720;PctSeqSimilarity=0.9813;PctSizeSimilarity=0.996;PctRecOverlap=0.7888;SizeDiff=1;StartDistance=-53;EndDistance=-52;GTMatch=0;TruScore=92;MatchId=2742.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:42:./.:23:21:3:17:./.:0:0:0:0:0/1:35:12:./.:.:.:.:.:.
chr4	21758790	HG4_Ill_GATKHCSBGrefine_3012	GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8641:HG4_PB_assemblyticsfalcon_18758:HG2_Ill_Krunchall_6054:HG3_PB_assemblyticsfalcon_19085:HG3_PB_pbsv_4221:HG4_PB_SVrefine2Falcon1Dovetail_2653:HG4_Ill_GATKHC_7214:HG4_Ill_GATKHCSBGrefine_3012:HG4_Ill_150bpfermikitraw_5727:HG2_PB_SVrefine2PB10Xhap12_3183:HG2_Ill_manta_1194:HG2_Ill_Krunchall_6053:HG2_Ill_GATKHC_7115:HG2_Ill_GATKHCSBGrefine_2871:HG2_Ill_250bpfermikitraw_5955:HG2_Ill_150bpfermikitraw_5522:HG4_PB_pbsv_4356:HG2_PB_pbsv_4330:HG4_Ill_SVrefine2DISCOVARDovetail_3277;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5522:HG2_Ill_250bpfermikitraw_5955:HG2_Ill_GATKHCSBGrefine_2871:HG2_Ill_GATKHC_7115:HG2_Ill_Krunchall_6053:HG2_Ill_manta_1194:HG2_PB_SVrefine2PB10Xhap12_3183:HG4_Ill_150bpfermikitraw_5727:HG4_Ill_GATKHCSBGrefine_3012:HG4_Ill_GATKHC_7214;NumExactMatchSVs=10;ClusterMaxShiftDist=0.18;ClusterMaxSizeDiff=0.18;ClusterMaxEditDist=0.18;PBcalls=8;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-96;DistBack=-32;DistForward=-96;DistMin=-96;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:21758789-21758889;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2743.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:42:0|1:26:3:3:38:./.:0:0:0:0:0/1:33:21:./.:.:.:.:.:.
chr4	22432891	HG3_Ill_GATKHC_7162	AAAAGCCTTGTACTAATTCTTATATATATATTATATATAACAATATTGTACAAGGGTACAAT	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_19172:HG4_PB_HySA_6450:HG2_PB_HySA_8140:HG4_PB_HySA_6449:HG3_Ill_Spiral_4676:HG2_PB_HySA_8139:HG2_Ill_Spiral_301:HG4_PB_assemblyticsfalcon_18760:HG4_PB_pbsv_4357:HG4_Ill_svaba_5598:HG4_Ill_manta_1055:HG4_Ill_Krunchall_6259:HG4_Ill_GATKHC_7218:HG4_Ill_GATKHCSBGrefine_3013:HG4_Ill_250bpfermikitraw_6017:HG4_Ill_150bpfermikitraw_5729:HG4_CG_vcfBeta_2867:HG4_10X_allpass_782:HG3_PB_pbsv_4222:HG3_PB_assemblyticsfalcon_19089:HG3_Ill_svaba_5582:HG3_Ill_scalpel_4298:HG3_Ill_manta_968:HG3_Ill_Krunchall_5949:HG3_Ill_GATKHC_7162:HG3_Ill_GATKHCSBGrefine_2879:HG3_Ill_250bpfermikitraw_5770:HG3_Ill_150bpfermikitraw_5587:HG3_CG_vcfBeta_2479:HG3_10X_allpass_823:HG2_PB_pbsv_4331:HG2_PB_assemblyticsPBcR_18538:HG2_Ill_svaba_5481:HG2_Ill_scalpel_4201:HG2_Ill_manta_1195:HG2_Ill_SpiralSDKrefine_12059:HG2_Ill_Krunchall_6058:HG2_Ill_GATKHC_7117:HG2_Ill_GATKHCSBGrefine_2872:HG2_Ill_250bpfermikitraw_5958:HG2_Ill_150bpfermikitraw_5523:HG2_CG_vcfBeta_2567:HG2_10X_allpass_665:HG3_PB_HySA_6635;NumClusterSVs=44;ExactMatchIDs=HG2_10X_allpass_665:HG2_CG_vcfBeta_2567:HG2_Ill_150bpfermikitraw_5523:HG2_Ill_250bpfermikitraw_5958:HG2_Ill_GATKHCSBGrefine_2872:HG2_Ill_GATKHC_7117:HG2_Ill_Krunchall_6058:HG2_Ill_SpiralSDKrefine_12059:HG2_Ill_manta_1195:HG2_Ill_scalpel_4201:HG2_Ill_svaba_5481:HG2_PB_assemblyticsPBcR_18538:HG2_PB_pbsv_4331:HG3_10X_allpass_823:HG3_CG_vcfBeta_2479:HG3_Ill_150bpfermikitraw_5587:HG3_Ill_250bpfermikitraw_5770:HG3_Ill_GATKHCSBGrefine_2879:HG3_Ill_GATKHC_7162:HG3_Ill_Krunchall_5949:HG3_Ill_manta_968:HG3_Ill_scalpel_4298:HG3_Ill_svaba_5582:HG3_PB_assemblyticsfalcon_19089:HG3_PB_pbsv_4222:HG4_10X_allpass_782:HG4_CG_vcfBeta_2867:HG4_Ill_150bpfermikitraw_5729:HG4_Ill_250bpfermikitraw_6017:HG4_Ill_GATKHCSBGrefine_3013:HG4_Ill_GATKHC_7218:HG4_Ill_Krunchall_6259:HG4_Ill_manta_1055:HG4_Ill_svaba_5598:HG4_PB_pbsv_4357;NumExactMatchSVs=35;ClusterMaxShiftDist=0.016;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.032;PBcalls=12;Illcalls=26;TenXcalls=3;CGcalls=3;PBexactcalls=5;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=3;HG2count=17;HG3count=14;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-61;DistBack=23224;DistForward=118559;DistMin=23224;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=4:22432892-22432958;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:56:./.:0:1:0:1:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr4	23721664	HG2_PB_SVrefine2Falcon1plusDovetail_8643	TAGAAAAATACAGATTCCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGACGCCTGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCCGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_589:HG3_Ill_Krunchall_5957:HG4_PB_assemblyticsfalcon_18773:HG2_PB_assemblyticsfalcon_19184:HG3_PB_assemblyticsfalcon_19101:HG2_PB_assemblyticsPBcR_18548:HG2_PB_pbsv_4334:HG3_PB_pbsv_4225:HG2_PB_HySA_8155:HG4_Ill_MetaSV_3671:HG3_Ill_MetaSV_3670:HG2_Ill_tnscope_453:HG2_Ill_MetaSV_3508:HG4_PB_pbsv_4362:HG4_PB_SVrefine2PBcRDovetail_2215:HG4_PB_SVrefine2Falcon1Dovetail_2658:HG4_Ill_manta_1056:HG4_Ill_GATKHCSBGrefine_3015:HG3_PB_HySA_6645:HG3_Ill_scalpel_4306:HG3_Ill_manta_970:HG3_Ill_SVrefine2DISCOVARDovetail_3300:HG3_Ill_GATKHCSBGrefine_2880:HG2_PB_SVrefine2PBcRplusDovetail_8020:HG2_PB_SVrefine2PB10Xhap12_3185:HG2_PB_SVrefine2Falcon2Bionano_2080:HG2_PB_SVrefine2Falcon1plusDovetail_8643:HG2_Ill_scalpel_4209:HG2_Ill_manta_1197:HG2_Ill_SVrefine2DISCOVARplusDovetail_9306:HG2_Ill_GATKHCSBGrefine_2873:HG2_10X_SVrefine210Xhap12_3186;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3186:HG2_Ill_GATKHCSBGrefine_2873:HG2_Ill_SVrefine2DISCOVARplusDovetail_9306:HG2_Ill_manta_1197:HG2_Ill_scalpel_4209:HG2_PB_SVrefine2Falcon1plusDovetail_8643:HG2_PB_SVrefine2Falcon2Bionano_2080:HG2_PB_SVrefine2PB10Xhap12_3185:HG2_PB_SVrefine2PBcRplusDovetail_8020:HG3_Ill_GATKHCSBGrefine_2880:HG3_Ill_SVrefine2DISCOVARDovetail_3300:HG3_Ill_manta_970:HG3_Ill_scalpel_4306:HG3_PB_HySA_6645:HG4_Ill_GATKHCSBGrefine_3015:HG4_Ill_manta_1056:HG4_PB_SVrefine2Falcon1Dovetail_2658:HG4_PB_SVrefine2PBcRDovetail_2215:HG4_PB_pbsv_4362;NumExactMatchSVs=19;ClusterMaxShiftDist=0.118211;ClusterMaxSizeDiff=0.118211;ClusterMaxEditDist=0.118211;PBcalls=15;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=818;DistForward=37953;DistMin=818;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=4:23721665-23722004;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:61:./.:0:1:0:0:./.:0:0:0:0:1/1:0:28:./.:1:10:.:.:.
chr4	25241049	HG3_Ill_scalpel_4316	TGCCGGCCCAGGGGGACCCAGCAGCACCCTCTGCAGCTGCTGGCCTAGGTGCTAAGCCCTTCACTGCCCGGGGCCGGTGGGGCCGGCCAGCCGCTCCGACTGCGGAACCTGCCAAGCCCATGCCCACCCGGAACTCGCGCTG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3186:HG3_PB_HySA_6660:HG2_PB_HySA_8168:HG3_PB_pbsv_4229:HG3_PB_SVrefine2PBcRDovetail_2003:HG3_Ill_svaba_5602:HG3_Ill_scalpel_4316:HG3_Ill_manta_971:HG3_Ill_SVrefine2DISCOVARDovetail_3308:HG3_Ill_MetaSV_3671:HG3_Ill_GATKHCSBGrefine_2881:HG3_CG_vcfBeta_2491:HG3_10X_allpass_824:HG2_PB_pbsv_4337:HG2_PB_assemblyticsfalcon_19195:HG2_PB_SVrefine2Falcon1plusDovetail_8644:HG2_Ill_svaba_5500:HG2_Ill_scalpel_4216:HG2_Ill_manta_1198:HG2_Ill_SpiralSDKrefine_12073:HG2_Ill_MetaSV_3509:HG2_Ill_GATKHCSBGrefine_2874:HG2_CG_vcfBeta_2576:HG2_10X_allpass_666:HG2_10X_SVrefine210Xhap12_3190;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3190:HG2_10X_allpass_666:HG2_CG_vcfBeta_2576:HG2_Ill_GATKHCSBGrefine_2874:HG2_Ill_MetaSV_3509:HG2_Ill_SpiralSDKrefine_12073:HG2_Ill_manta_1198:HG2_Ill_scalpel_4216:HG2_Ill_svaba_5500:HG2_PB_SVrefine2Falcon1plusDovetail_8644:HG2_PB_assemblyticsfalcon_19195:HG2_PB_pbsv_4337:HG3_10X_allpass_824:HG3_CG_vcfBeta_2491:HG3_Ill_GATKHCSBGrefine_2881:HG3_Ill_MetaSV_3671:HG3_Ill_SVrefine2DISCOVARDovetail_3308:HG3_Ill_manta_971:HG3_Ill_scalpel_4316:HG3_Ill_svaba_5602:HG3_PB_SVrefine2PBcRDovetail_2003:HG3_PB_pbsv_4229;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0538721;ClusterMaxSizeDiff=0.0538721;ClusterMaxEditDist=0.0538721;PBcalls=8;Illcalls=12;TenXcalls=3;CGcalls=2;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=2;HG2count=14;HG3count=11;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-141;DistBack=-71;DistForward=-139;DistMin=-139;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=4:25241050-25241193;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2746.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:21:0|1:27:0:0:20:./.:0:0:0:0:0/1:32:16:./.:.:.:.:.:.
chr4	26955951	HG2_PB_SVrefine2Falcon1plusDovetail_8650	TTGCTGAGCACTCCCTTATGTACCTTGTCAATTTAGGATTCCCTATAGTAGGTTTGCATATAATTGGGTGTATTTACCAGGGAACTCTACATTATTTGCCGTACATTATTTGAAGACTCACTTCATTGAATTTCAGATCCTATTTTCAGATTTCTCAATTCATGAATTCCAAATAAGAAGTATTTGTCTTTTGACAAATGAATACAAAGAAGAAGTATTTGTCTTTTGTGTATGCATTTTCAGTTATTGGTGACTGTTTTAAAATTTCTGTAGTTACCCTACTTCATTGCTAAAATGAGGAGGGGTTTTTAATAAAGTTTTTGAAAAGTCTGAACAATCAGAATTATATGCTTTTTTCTTTAGGATACTGGGAAAAGGTTCCATAGAACCTGATGATTTTTAATGTGTTTGGTTCATTTAAACATTTTCTAAACAAAAATATTTCTAATTATACTGGTTTCTAGTCACATTCCGTGATCAGCATGTTGAAGATCTGTAAGATACAGAATATACTTTTATTTCATGTGGTTTGTTACGAGTTATTGTGATATCCTGGAGACATACTTCTGTTTTAAAACAGAAGTATTTTTAGATGGTAATTCCAGGGAAAATACAATTCATTGTGTTTATTCAATTTTCACCCAACTTTATTAGGAATTTTATTTCTTAGGAATTCTTTATTATTTTTTCTTAGAAATTTCTTAGAAATTAAATTCCTTAGAAATAAAATTTCTTAGAAATTTTATTTCTAAGAATTCTTAGGAATTCTTAGGAGTTCTTTTATACCATATGAGCTATAGGTATCTTCAAAAGTTTTAAAAAATTAAAAAAATCTTTTATTTTGTTAAGTATGTTTGGCATATATCCATAAGCTCATTCTGGCTTTTCTAAAATAGTTAAGTGGCTAGAATACCACATCTAGTCATGTGGAAATTTGCTTATTTTCTGTAATATATTGATCCTGAAATCACAGAACTGCACGTTTAGATTGTTTGAGTTCATGTAGTAAAGATAATTTTTTAGGACATTGTCTTTAATATATATTACGTAAATGAAACAGTTGCCATTTGTTCCAACTGATTGGACCATTTCCAAGGCAGATTTCCTCCCTGCTATGTCCATTATTATGATTTTCAGTCTAGAATTTCTTTCCAGCTCTTGGACTTTTTCCAAGATAGAGACAACTTCTGAGCATCTCTTTGGTAGTCTCTACTGAATTTTGAAGGTGTCAGTCAAGAAGAGTTGGATGACAGGAGGACTTGTAGCATTCAGGCAGGCCCCCTTAAATATAACTTAAGGCAGCATTTAGTAAAAAGGAGTAAGGCACTATTTAGAGCAGACAACAGATTACATAGATTTTTTTAGTTTAGTACTTTTCAAACTTTTGATGACGAAAGACCAGATGTTTAATTTCCAGTATATATGTACAGGGTGGACAAGGTGAGCATATTTATCATATGCTCGGCCCAGTTGCTGTGGAAGTGTTTTCTAATTGCCATAA	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3675:HG2_10X_allpass_667:HG4_PB_assemblyticsfalcon_18797:HG2_PB_assemblyticsPBcR_18571:HG2_PB_pbsv_4349:HG2_Ill_Krunchall_6092:HG4_PB_SVrefine2Falcon1Dovetail_2665:HG4_Ill_Cortex_2605:HG4_10X_allpass_785:HG3_PB_SVrefine2Falcon1Dovetail_2728:HG3_Ill_Cortex_2620:HG2_PB_SVrefine2PBcRplusDovetail_8026:HG2_PB_SVrefine2PB10Xhap12_3194:HG2_PB_SVrefine2Falcon1plusDovetail_8650:HG2_Ill_breakscan11_594:HG2_Ill_SpiralSDKrefine_12080:HG2_Ill_MetaSV_3513:HG2_Ill_Cortex_6149:HG2_10X_SVrefine210Xhap12_3196:HG2_Ill_tnscope_455:HG4_PB_pbsv_4378;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3196:HG2_Ill_Cortex_6149:HG2_Ill_MetaSV_3513:HG2_Ill_SpiralSDKrefine_12080:HG2_Ill_breakscan11_594:HG2_PB_SVrefine2Falcon1plusDovetail_8650:HG2_PB_SVrefine2PB10Xhap12_3194:HG2_PB_SVrefine2PBcRplusDovetail_8026:HG3_Ill_Cortex_2620:HG3_PB_SVrefine2Falcon1Dovetail_2728:HG4_10X_allpass_785:HG4_Ill_Cortex_2605:HG4_PB_SVrefine2Falcon1Dovetail_2665;NumExactMatchSVs=13;ClusterMaxShiftDist=0.114177;ClusterMaxSizeDiff=0.114177;ClusterMaxEditDist=0.114177;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1500;DistBack=88326;DistForward=-1494;DistMin=-1494;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=0/0;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=4:26955952-26957461;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2747.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:44:./.:23:16:17:9:./.:0:0:0:0:0/1:53:15:0/1:108:54:1487:.:.
chr4	27627538	HG2_Ill_breakscan11_595	GTATGTATGTATATATATATATATATATATATATATATATATATATATATA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_18573:HG4_PB_HySA_6485:HG3_PB_HySA_6682:HG2_PB_HySA_8191:HG4_PB_assemblyticsfalcon_18801:HG3_PB_assemblyticsfalcon_19129:HG4_PB_pbsv_4381:HG4_Ill_scalpel_4144:HG4_Ill_Krunchall_6299:HG4_Ill_GATKHC_7265:HG4_Ill_GATKHCSBGrefine_3031:HG4_Ill_250bpfermikitraw_6056:HG4_Ill_150bpfermikitraw_5767:HG3_PB_pbsv_4242:HG3_Ill_scalpel_4328:HG3_Ill_Krunchall_5985:HG3_Ill_GATKHC_7207:HG3_Ill_GATKHCSBGrefine_2893:HG3_Ill_250bpfermikitraw_5808:HG3_Ill_150bpfermikitraw_5620:HG2_PB_pbsv_4352:HG2_PB_assemblyticsfalcon_19216:HG2_Ill_scalpel_4232:HG2_Ill_breakscan11_595:HG2_Ill_SpiralSDKrefine_12083:HG2_Ill_Krunchall_6099:HG2_Ill_GATKHC_7171:HG2_Ill_GATKHCSBGrefine_2889:HG2_Ill_250bpfermikitraw_5998:HG2_Ill_150bpfermikitraw_5558;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5558:HG2_Ill_250bpfermikitraw_5998:HG2_Ill_GATKHCSBGrefine_2889:HG2_Ill_GATKHC_7171:HG2_Ill_Krunchall_6099:HG2_Ill_SpiralSDKrefine_12083:HG2_Ill_breakscan11_595:HG2_Ill_scalpel_4232:HG2_PB_assemblyticsfalcon_19216:HG2_PB_pbsv_4352:HG3_Ill_150bpfermikitraw_5620:HG3_Ill_250bpfermikitraw_5808:HG3_Ill_GATKHCSBGrefine_2893:HG3_Ill_GATKHC_7207:HG3_Ill_Krunchall_5985:HG3_Ill_scalpel_4328:HG3_PB_pbsv_4242:HG4_Ill_150bpfermikitraw_5767:HG4_Ill_250bpfermikitraw_6056:HG4_Ill_GATKHCSBGrefine_3031:HG4_Ill_GATKHC_7265:HG4_Ill_Krunchall_6299:HG4_Ill_scalpel_4144:HG4_PB_pbsv_4381;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0582524;ClusterMaxSizeDiff=0.0582524;ClusterMaxEditDist=0.0582524;PBcalls=10;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=43108;DistForward=5671;DistMin=5671;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=4:27627539-27627607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2748.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:91:1/1:4:47:0:31:./.:0:0:0:0:1/1:0:41:./.:.:.:.:.:.
chr4	28421590	HG3_10X_allpass_827	CTGTTACTAGGAGCAGAAAGGAAACTTCTAGGCCTTCCCATACTCTTCCAGGGGTCCCACAACAAAACTTGCTAAAAGATTTCCTAAAGTTAAACCAGAACTCTTCTATGCTCATTCCACACTATGGAGTTTTTAATGCTTACTCTCTTTTTTATGTACCTGTTCAAAATTAACTCTCATTTGCTTTTCATTGTTAACTGTCTGTGTTTCAGGTGAAGAGATGCATGTAGCTGATTTCCATGTTTAAATAAATGCAGAGCATTGATATTTTTAGCATTGGTCTCAGTGGCAGAAAATAGTACAAGAACTCTAATGTAACGGATAAAGCATAGATTCTAACCCCAGATAGAG	C	20	PASS	ClusterIDs=HG2_Ill_Cortex_6153:HG2_10X_allpass_668:HG4_Ill_Krunchall_6306:HG3_Ill_Krunchall_5993:HG2_Ill_Krunchall_6107:HG2_Ill_tnscope_456:HG2_Ill_MetaSV_3516:HG4_PB_assemblyticsfalcon_18812:HG4_PB_pbsv_4386:HG4_PB_SVrefine2PBcRDovetail_2225:HG4_PB_SVrefine2Falcon1Dovetail_2670:HG4_Ill_scalpel_4150:HG4_Ill_manta_1061:HG4_Ill_SVrefine2DISCOVARDovetail_3305:HG4_Ill_GATKHCSBGrefine_3035:HG4_10X_allpass_787:HG3_PB_pbsv_4248:HG3_PB_assemblyticsfalcon_19140:HG3_PB_SVrefine2Falcon1Dovetail_2729:HG3_Ill_manta_977:HG3_Ill_SVrefine2DISCOVARDovetail_3323:HG3_Ill_GATKHCSBGrefine_2897:HG3_10X_allpass_827:HG2_PB_pbsv_4357:HG2_PB_SVrefine2PB10Xhap12_3199:HG2_PB_SVrefine2Falcon2Bionano_2093:HG2_Ill_SpiralSDKrefine_12087:HG2_Ill_GATKHCSBGrefine_2894:HG2_10X_SVrefine210Xhap12_3200:HG4_Ill_Cortex_2607:HG3_Ill_Cortex_2622;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3200:HG2_Ill_GATKHCSBGrefine_2894:HG2_Ill_SpiralSDKrefine_12087:HG2_PB_SVrefine2Falcon2Bionano_2093:HG2_PB_SVrefine2PB10Xhap12_3199:HG2_PB_pbsv_4357:HG3_10X_allpass_827:HG3_Ill_GATKHCSBGrefine_2897:HG3_Ill_SVrefine2DISCOVARDovetail_3323:HG3_Ill_manta_977:HG3_PB_SVrefine2Falcon1Dovetail_2729:HG3_PB_assemblyticsfalcon_19140:HG3_PB_pbsv_4248:HG4_10X_allpass_787:HG4_Ill_GATKHCSBGrefine_3035:HG4_Ill_SVrefine2DISCOVARDovetail_3305:HG4_Ill_manta_1061:HG4_Ill_scalpel_4150:HG4_PB_SVrefine2Falcon1Dovetail_2670:HG4_PB_SVrefine2PBcRDovetail_2225:HG4_PB_pbsv_4386;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0143062;ClusterMaxSizeDiff=0.0143062;ClusterMaxEditDist=0.0143062;PBcalls=10;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-350;DistBack=-506;DistForward=-350;DistMin=-506;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:28421591-28421941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2749.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:17:0|1:29:0:1:17:./.:0:0:0:0:0/1:40:12:0/1:43:7:.:.:.
chr4	28564286	HG3_10X_allpass_828	TGAAATGAGTAATACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAATAAAATAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3200:HG2_PB_assemblyticsPBcR_18583:HG3_PB_pbsv_4250:HG2_Ill_Krunchall_6113:HG3_PB_assemblyticsfalcon_19143:HG2_PB_assemblyticsfalcon_19228:HG2_PB_pbsv_4359:HG2_PB_PB10Xdip_22122:HG2_PB_PB10Xdip_22121:HG3_Ill_MetaSV_3678:HG2_Ill_tnscope_457:HG4_PB_SVrefine2Falcon1Dovetail_2671:HG3_PB_SVrefine2PBcRDovetail_2011:HG3_Ill_manta_978:HG3_Ill_GATKHCSBGrefine_2900:HG3_10X_allpass_828:HG2_PB_SVrefine2PBcRplusDovetail_8032:HG2_PB_SVrefine2PB10Xhap12_3201:HG2_PB_SVrefine2Falcon1plusDovetail_8655:HG2_Ill_manta_1204:HG2_Ill_MetaSV_3517:HG2_Ill_GATKHCSBGrefine_2896:HG2_10X_allpass_669:HG2_10X_SVrefine210Xhap12_3204:HG2_Ill_breakscan11_596:HG3_Ill_Krunchall_5996:HG2_PB_HySA_8210;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3204:HG2_10X_allpass_669:HG2_Ill_GATKHCSBGrefine_2896:HG2_Ill_MetaSV_3517:HG2_Ill_manta_1204:HG2_PB_PB10Xdip_22121:HG4_PB_SVrefine2Falcon1Dovetail_2671:HG3_PB_SVrefine2PBcRDovetail_2011:HG3_Ill_manta_978:HG3_Ill_GATKHCSBGrefine_2900:HG3_10X_allpass_828:HG2_PB_SVrefine2PBcRplusDovetail_8032:HG2_PB_SVrefine2PB10Xhap12_3201:HG2_PB_SVrefine2Falcon1plusDovetail_8655;NumExactMatchSVs=14;ClusterMaxShiftDist=0.136232;ClusterMaxSizeDiff=0.136232;ClusterMaxEditDist=0.136232;PBcalls=14;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=4409;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:28564287-28564624;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2750.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:36:0|1:28:1:1:30:./.:0:0:0:0:0/1:31:19:0/1:23:4:.:.:.
chr4	29661109	HG2_Ill_SVrefine2DISCOVARplusDovetail_9342	AAGGGCCCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGTGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3519:HG4_PB_assemblyticsfalcon_18828:HG2_PB_assemblyticsPBcR_18594:HG4_PB_pbsv_4393:HG4_Ill_Krunchall_6325:HG2_Ill_Krunchall_6126:HG3_PB_assemblyticsfalcon_19159:HG2_PB_assemblyticsfalcon_19240:HG3_PB_HySA_6710:HG2_PB_HySA_8221:HG4_PB_HySA_6511:HG4_PB_SVrefine2PBcRDovetail_2228:HG4_PB_SVrefine2Falcon1Dovetail_2677:HG4_Ill_scalpel_4161:HG4_Ill_manta_1063:HG4_Ill_SVrefine2DISCOVARDovetail_3313:HG4_Ill_MetaSV_3680:HG4_Ill_GATKHCSBGrefine_3039:HG4_10X_allpass_788:HG3_PB_pbsv_4254:HG3_Ill_scalpel_4345:HG3_Ill_manta_979:HG3_Ill_SVrefine2DISCOVARDovetail_3330:HG3_Ill_GATKHCSBGrefine_2905:HG3_10X_allpass_830:HG2_PB_pbsv_4362:HG2_PB_SVrefine2PBcRplusDovetail_8034:HG2_PB_SVrefine2PB10Xhap12_3204:HG2_PB_SVrefine2Falcon2Bionano_2097:HG2_PB_SVrefine2Falcon1plusDovetail_8658:HG2_Ill_scalpel_4252:HG2_Ill_manta_1206:HG2_Ill_SVrefine2DISCOVARplusDovetail_9342:HG2_Ill_GATKHCSBGrefine_2900:HG2_10X_allpass_670:HG2_10X_SVrefine210Xhap12_3206:HG2_Ill_breakscan11_597:HG3_Ill_MetaSV_3680:HG2_Ill_tnscope_458;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3206:HG2_10X_allpass_670:HG2_Ill_GATKHCSBGrefine_2900:HG2_Ill_SVrefine2DISCOVARplusDovetail_9342:HG2_Ill_manta_1206:HG2_Ill_scalpel_4252:HG2_PB_SVrefine2Falcon1plusDovetail_8658:HG2_PB_SVrefine2Falcon2Bionano_2097:HG2_PB_SVrefine2PB10Xhap12_3204:HG2_PB_SVrefine2PBcRplusDovetail_8034:HG2_PB_pbsv_4362:HG3_10X_allpass_830:HG3_Ill_GATKHCSBGrefine_2905:HG3_Ill_SVrefine2DISCOVARDovetail_3330:HG3_Ill_manta_979:HG3_Ill_scalpel_4345:HG3_PB_pbsv_4254:HG4_10X_allpass_788:HG4_Ill_GATKHCSBGrefine_3039:HG4_Ill_MetaSV_3680:HG4_Ill_SVrefine2DISCOVARDovetail_3313:HG4_Ill_manta_1063:HG4_Ill_scalpel_4161:HG4_PB_SVrefine2Falcon1Dovetail_2677:HG4_PB_SVrefine2PBcRDovetail_2228;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0806202;ClusterMaxSizeDiff=0.0806202;ClusterMaxEditDist=0.0806202;PBcalls=16;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=9661;DistForward=1441;DistMin=1441;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:29661110-29661450;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2751.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:3:31:0:20:./.:0:0:0:0:1/1:0:43:./.:1:14:.:.:.
chr4	31338487	HG2_Ill_manta_1210	TGGCATCTGAGATAAAAGAAGTTTATCAAGTAATGGCACAAGGTACAAATATTGTTACAAAGGAAATTGTAGACTTCCTTAACTGAGTTCTTCTGACATGAATTTCATTCTTAAATAGAAAACAATTGATATTTTAATCCAAACCAGCATTTGTTTTTACTGAGATAACTGTAAAGCAAATGTAATGGTAGCACATAATA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_4262:HG4_PB_assemblyticsfalcon_18837:HG2_PB_assemblyticsfalcon_19252:HG2_PB_assemblyticsPBcR_18607:HG2_PB_pbsv_4370:HG4_Ill_Krunchall_6339:HG3_Ill_Krunchall_6017:HG2_Ill_Krunchall_6143:HG3_PB_HySA_6726:HG2_PB_HySA_8243:HG4_PB_pbsv_4405:HG4_PB_HySA_6534:HG3_Ill_MetaSV_3684:HG2_Ill_tnscope_460:HG2_Ill_MetaSV_3522:HG4_PB_SVrefine2PBcRDovetail_2233:HG4_PB_SVrefine2Falcon1Dovetail_2683:HG4_Ill_svaba_5673:HG4_Ill_scalpel_4166:HG4_Ill_manta_1066:HG4_Ill_SVrefine2DISCOVARDovetail_3320:HG4_Ill_MetaSV_3685:HG4_Ill_GATKHCSBGrefine_3049:HG4_Ill_250bpfermikitraw_6095:HG4_Ill_150bpfermikitraw_5805:HG4_10X_allpass_790:HG3_Ill_svaba_5652:HG3_Ill_manta_982:HG3_Ill_SVrefine2DISCOVARDovetail_3341:HG3_Ill_GATKHCSBGrefine_2915:HG3_10X_allpass_833:HG2_PB_SVrefine2PBcRplusDovetail_8038:HG2_PB_SVrefine2PB10Xhap12_3208:HG2_PB_SVrefine2Falcon2Bionano_2101:HG2_PB_SVrefine2Falcon1plusDovetail_8661:HG2_Ill_svaba_5556:HG2_Ill_scalpel_4263:HG2_Ill_manta_1210:HG2_Ill_SpiralSDKrefine_12110:HG2_Ill_SVrefine2DISCOVARplusDovetail_9350:HG2_Ill_GATKHCSBGrefine_2911:HG2_10X_allpass_671:HG2_10X_SVrefine210Xhap12_3213;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3213:HG2_10X_allpass_671:HG2_Ill_GATKHCSBGrefine_2911:HG2_Ill_SVrefine2DISCOVARplusDovetail_9350:HG2_Ill_SpiralSDKrefine_12110:HG2_Ill_manta_1210:HG2_Ill_scalpel_4263:HG2_Ill_svaba_5556:HG2_PB_SVrefine2Falcon1plusDovetail_8661:HG2_PB_SVrefine2Falcon2Bionano_2101:HG2_PB_SVrefine2PB10Xhap12_3208:HG2_PB_SVrefine2PBcRplusDovetail_8038:HG3_10X_allpass_833:HG3_Ill_GATKHCSBGrefine_2915:HG3_Ill_SVrefine2DISCOVARDovetail_3341:HG3_Ill_manta_982:HG3_Ill_svaba_5652:HG4_10X_allpass_790:HG4_Ill_150bpfermikitraw_5805:HG4_Ill_250bpfermikitraw_6095:HG4_Ill_GATKHCSBGrefine_3049:HG4_Ill_MetaSV_3685:HG4_Ill_SVrefine2DISCOVARDovetail_3320:HG4_Ill_manta_1066:HG4_Ill_scalpel_4166:HG4_Ill_svaba_5673:HG4_PB_SVrefine2Falcon1Dovetail_2683:HG4_PB_SVrefine2PBcRDovetail_2233;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0918367;ClusterMaxSizeDiff=0.0918367;ClusterMaxEditDist=0.0918367;PBcalls=15;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=18;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-199;DistBack=145;DistForward=25063;DistMin=145;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=4:31338488-31338695;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2753.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:67:./.:11:29:1:31:./.:0:0:0:0:1/1:0:43:./.:.:.:.:.:.
chr4	31492863	HG2_Ill_manta_1211	ATTTCGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGCACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_4407:HG2_10X_allpass_672:HG2_PB_HySA_8245:HG4_Ill_Spiral_352:HG3_Ill_Spiral_4738:HG2_Ill_Spiral_302:HG4_PB_assemblyticsfalcon_18840:HG2_PB_assemblyticsfalcon_19255:HG2_PB_assemblyticsPBcR_18611:HG3_PB_assemblyticsfalcon_19176:HG4_Ill_MetaSV_3687:HG3_Ill_MetaSV_3686:HG2_Ill_tnscope_461:HG2_Ill_MetaSV_3523:HG4_PB_SVrefine2PBcRDovetail_2235:HG4_PB_SVrefine2Falcon1Dovetail_2684:HG4_Ill_manta_1067:HG4_Ill_SVrefine2DISCOVARDovetail_3322:HG4_Ill_Krunchall_6342:HG4_Ill_GATKHCSBGrefine_3051:HG4_10X_allpass_792:HG3_PB_pbsv_4263:HG3_Ill_manta_983:HG3_Ill_SVrefine2DISCOVARDovetail_3342:HG3_Ill_GATKHCSBGrefine_2916:HG3_10X_allpass_834:HG2_PB_pbsv_4371:HG2_PB_SVrefine2PBcRplusDovetail_8039:HG2_PB_SVrefine2PB10Xhap12_3209:HG2_PB_SVrefine2Falcon2Bionano_2102:HG2_PB_SVrefine2Falcon1plusDovetail_8662:HG2_Ill_manta_1211:HG2_Ill_SpiralSDKrefine_12113:HG2_Ill_SVrefine2DISCOVARplusDovetail_9352:HG2_Ill_Krunchall_6146:HG2_Ill_GATKHCSBGrefine_2912:HG2_10X_SVrefine210Xhap12_3215:HG2_Ill_breakscan11_599;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3215:HG2_Ill_GATKHCSBGrefine_2912:HG2_Ill_Krunchall_6146:HG2_Ill_SVrefine2DISCOVARplusDovetail_9352:HG2_Ill_SpiralSDKrefine_12113:HG2_Ill_manta_1211:HG2_PB_SVrefine2Falcon1plusDovetail_8662:HG2_PB_SVrefine2Falcon2Bionano_2102:HG2_PB_SVrefine2PB10Xhap12_3209:HG2_PB_SVrefine2PBcRplusDovetail_8039:HG2_PB_pbsv_4371:HG3_10X_allpass_834:HG3_Ill_GATKHCSBGrefine_2916:HG3_Ill_SVrefine2DISCOVARDovetail_3342:HG3_Ill_manta_983:HG3_PB_pbsv_4263:HG4_10X_allpass_792:HG4_Ill_GATKHCSBGrefine_3051:HG4_Ill_Krunchall_6342:HG4_Ill_SVrefine2DISCOVARDovetail_3322:HG4_Ill_manta_1067:HG4_PB_SVrefine2Falcon1Dovetail_2684:HG4_PB_SVrefine2PBcRDovetail_2235;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.0183697;PBcalls=14;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-436;DistBack=-436;DistForward=-431;DistMin=-436;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=4:31492864-31493303;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2754.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:101:1/1:0:6:2:69:./.:0:0:0:0:1/1:0:34:0/1:2:14:.:.:.
chr4	32197281	HG2_PB_PB10Xdip_22145	TGAACCTGGGAGGCAGAGCTTGCAGTGAGCAGAGATCATGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCATG	TG	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3214:HG4_PB_assemblyticsfalcon_18851:HG3_PB_assemblyticsfalcon_19184:HG2_PB_assemblyticsfalcon_19263:HG4_PB_SVrefine2Falcon1Dovetail_2687:HG2_PB_SVrefine2Falcon1plusDovetail_8664:HG2_PB_PB10Xdip_22145:HG2_PB_PB10Xdip_22144:HG2_Ill_MetaSV_3525:HG4_PB_HySA_6545:HG4_Ill_GATKHCSBGrefine_3054:HG2_Ill_scalpel_4269:HG2_PB_pbsv_4379:HG2_PB_HySA_8256:HG4_PB_pbsv_4414:HG4_PB_SVrefine2PBcRDovetail_2237;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_scalpel_4269:HG2_PB_PB10Xdip_22145:HG4_PB_HySA_6545:HG4_Ill_GATKHCSBGrefine_3054;NumExactMatchSVs=4;ClusterMaxShiftDist=0.134111;ClusterMaxSizeDiff=0.134111;ClusterMaxEditDist=0.233236;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-165;DistBack=5167;DistForward=79;DistMin=79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=190;REFWIDENED=4:32197189-32197543;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=0.988;SizeDiff=0;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2755.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:21:0|1:37:0:0:21:./.:0:0:0:0:0/1:14:8:./.:.:.:.:.:.
chr4	32540600	HG2_PB_SVrefine2PB10Xhap12_3215	AGAAAGATAGACCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAAGGGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAG	A	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2238:HG2_PB_SVrefine2PB10Xhap12_3216:HG2_PB_PB10Xdip_22147:HG2_PB_PB10Xdip_22146:HG4_Ill_Krunchall_6357:HG3_Ill_Krunchall_6034:HG2_Ill_Krunchall_6158:HG3_PB_pbsv_4267:HG2_PB_pbsv_4381:HG2_PB_HySA_8259:HG4_Ill_MetaSV_3690:HG3_Ill_MetaSV_3688:HG2_Ill_tnscope_462:HG2_Ill_MetaSV_3526:HG4_PB_pbsv_4416:HG4_Ill_manta_1069:HG4_Ill_GATKHCSBGrefine_3056:HG4_10X_allpass_793:HG3_PB_SVrefine2Falcon1Dovetail_2735:HG3_Ill_manta_985:HG3_Ill_SVrefine2DISCOVARDovetail_3345:HG3_Ill_GATKHCSBGrefine_2920:HG3_10X_allpass_835:HG2_PB_SVrefine2PBcRplusDovetail_8044:HG2_PB_SVrefine2PB10Xhap12_3215:HG2_PB_SVrefine2Falcon1plusDovetail_8665:HG2_Ill_manta_1215:HG2_Ill_GATKHCSBGrefine_2917:HG2_10X_allpass_673:HG2_10X_SVrefine210Xhap12_3222:HG2_Ill_breakscan11_600;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3222:HG2_10X_allpass_673:HG2_Ill_GATKHCSBGrefine_2917:HG2_Ill_manta_1215:HG2_PB_PB10Xdip_22147:HG4_PB_pbsv_4416:HG4_Ill_manta_1069:HG4_Ill_GATKHCSBGrefine_3056:HG4_10X_allpass_793:HG3_PB_SVrefine2Falcon1Dovetail_2735:HG3_Ill_manta_985:HG3_Ill_SVrefine2DISCOVARDovetail_3345:HG3_Ill_GATKHCSBGrefine_2920:HG3_10X_allpass_835:HG2_PB_SVrefine2PBcRplusDovetail_8044:HG2_PB_SVrefine2PB10Xhap12_3215:HG2_PB_SVrefine2Falcon1plusDovetail_8665;NumExactMatchSVs=17;ClusterMaxShiftDist=0.102564;ClusterMaxSizeDiff=0.102564;ClusterMaxEditDist=0.11463;PBcalls=12;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=17076;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:32540601-32540930;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2756.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:46:0|1:36:1:1:39:./.:0:0:0:0:0/1:21:21:0/1:25:9:.:.:.
chr4	34220566	HG2_Ill_GATKHCSBGrefine_2919	TATATATATATATATACCATTGGTATCTATATATATATATATATATATATATACCATTGGTATATAG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_5618:HG2_PB_pbsv_4385:HG4_PB_pbsv_4420:HG4_Ill_svaba_5706:HG4_Ill_scalpel_4186:HG4_Ill_Krunchall_6370:HG4_Ill_GATKHC_7355:HG4_Ill_GATKHCSBGrefine_3059:HG4_Ill_250bpfermikitraw_6121:HG4_Ill_150bpfermikitraw_5833:HG2_Ill_svaba_5586:HG2_Ill_scalpel_4279:HG2_Ill_SpiralSDKrefine_12132:HG2_Ill_Krunchall_6167:HG2_Ill_GATKHC_7262:HG2_Ill_GATKHCSBGrefine_2919:HG2_Ill_250bpfermikitraw_6056;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5618:HG4_Ill_svaba_5706:HG4_Ill_scalpel_4186:HG4_Ill_Krunchall_6370:HG4_Ill_GATKHC_7355:HG4_Ill_GATKHCSBGrefine_3059:HG4_Ill_250bpfermikitraw_6121:HG4_Ill_150bpfermikitraw_5833:HG2_Ill_svaba_5586:HG2_Ill_scalpel_4279:HG2_Ill_SpiralSDKrefine_12132:HG2_Ill_Krunchall_6167:HG2_Ill_GATKHC_7262:HG2_Ill_GATKHCSBGrefine_2919:HG2_Ill_250bpfermikitraw_6056;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0625;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.171875;PBcalls=2;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=-32;DistForward=26;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=160;REFWIDENED=4:34220558-34220783;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:39:0|1:45:11:2:26:./.:0:0:0:0:0/1:16:5:./.:.:.:.:.:.
chr4	34779881	HG3_PB_SVrefine2Falcon1Dovetail_2737	GGGCATGGTGGTTGGTGCCTGTAGTCCCAGGTACTCAGGAGGTTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTACAGCGTGCAGTGAGCTGAGATTGTGCCACTGCACTCCAGCCTGGGTGACAATGCAAGACTCCATCTCAAAAAAAAAAAAAAAAATTACCACAAACTAAGCTGCTTAAATGAACACATATGTATTATCTCACAGTTTCTGTGGGGTCAGAAGTCGACGCATGGCTTACTTGGGTTCTCTGCTCAGTCTTGCAAATCTGCATTCAAGGCATTGGCCAGGTGGTGGTCTCATCTGGAGTTATGACTGGGGAACTGGAAAGGAATCTGCTTCCACGTTCATTTAGGTTATTGTCTAAGTAAGGCAATGTTGTACAGCAGTTATCACCCAGGTTCTTGGCAGAATCTATTTTCTTATAACTGTAGGCTGGATTTTTTCTCTTTGTAGCTAGAGGTCACCCTCAGGTCCTAGAAGCCACCCAAAATTCCTAAAGGCCACCTGTAGTTCCTAATGGTCTCCTACAACAAAGCCACTTACACCATCAAGCCGGCAAGGAAATTCTCTAGCTTTAGTAGGTCAAGAAGCAGTCATGGCTGGGTACAGTGGTTCATGCCTGTAATCCCACCACTTTGGGAGGCTGAGGCAGGTGGATCACGAGGTCAGGAGATTGAGGCTATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGTAGGCACCTGTAGTCCCAGCTACTCAGGAGGCTGGGGCAGGAGAATGGCATGAACCCAGGAGGCAGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCATGCCACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAAGCAGTCATATAACATATTCATGATAGCAATATACCATATACCATATTCTTGTCATATAGTGCAATGTAATTATGGGAGTGACATAGAATGGCTTTTGCCATGTTCTATTAGATAGAAGTAAGAGAGAAACCTCATTCATATTCAAAGAGAAGGAGTTACATAAATGCATGAATACCACTGGATGAAAATAATTGGAGGCTAACCTAGAGTCTGTCCTACAAAATAACTAATGTAACATCTTATAGGCTGAAACAGACTCAATTCAAACGGCTTTATCACTGCTCAGTGATCACTGCCCAGTTTTCTACGTTATTTACTTTACATAATGTTTTCTATAGACATCAAACACTTTGAGTTTTAAAACATTTCCAAGTGATAGTTATTGTAATGCATTTAATTTTATTTGTAATCTTATAATACTAGCAAGTTTTTGTTCTATTTCCATATTTTGGTATACATATTCATGGTATAACAAGCAGATACCTAGCAGTGCTTTTAGAACATGATTATATCATTCATAACCTGTTAGACTGATACTTATTTTCTATTTCTGCTCTTTCAACTCAGAAAATGTAGATCATATTTGTCTTATAATTTAAAGATATAAATAATGTAATCAGACATACTGTATCAATCCAATTTTACACTGTTATAAAAAAACTGCCCAAGACTGGTAATTTATAAAGAAAAGAGGTTTAATTGACTCACAGTTCTGCATGGCTAGGGAGGCCTCAGGAAACTTACAACCATGGTGGAAGGCAGCTCTTCACAGAGTAGCAGGAGAGAGAAGAAGTGAATGAGAGGGGAACTATCAAATACTTGTAAAACCATCACATCTTGTGAGAACTCACTCACTATCATGAGAACAGCATAAAGGGAACCAGCTCCATGACTAGATCACAATGATCTAATCACCTGCCACCAGGTCTCTCCCTCAATGCCTGAAGATTACAACTCAAGATGATATTTGAGTGAGGACACAAATCCTAACCATATTATTACACCCCTGACCCCTCCCAATCTCATGTCTTTTCACAATTTAAACCATTCATGCCTTCCCAACAGTGCCCCAAAGTCTTAACTCATTTCATCATTAACTCAAAAGTCCAAGTGACATCGAATTCAAGACAAAGCAAGTCCCATCCACCTATAAGCCTGGAAAATCAAAAGCAAGCTAGTTACTTCCTAGGTACAATGGGAGTATAGGCATGGATAAATGCTCCCATCCCAAATGGGAGAAATTGGCCAAAACAAAGAGACTACAGGTCCCATGCAAGTTCAAAATCCAGCAGGGTGTTCATCAAATCTTAAAGCCCCAAAATGATTTCCTTTGACTCCATGTCTCACATCTAGGTCACAATGATCTAAGGGTTGGGCTCCCACCATCTTAGGCAGCTCCACCCCTGTGGCTTTGCATGGTATAGCCCTCATCCCAGCTGCTTTCATGGGCTGGCTTTGAGTGTCTGCACCTTTTCCAGGTGCACAATGCAAGCTGTTGGTGGATCTACAATTCTGGAGTCTGGAGGATGGTGGCCCTCTTCTCATAGCTCCACTAAGCAGTGCCCCAGTGGGGATTCTGTGTTGGGGGCTCTGACCCTACATTTCCCTTCTGCACTGCCCTAGCAGAGGTCCTCCATGAGGGCTTTGCCCCTGCAATAGACTTCTATCTGGACATCCAGGTGTTTCCATACATCCTCTGAAATATGGGTGAAGGTTCTCAAACCTCAGTTCTTGGCTTCTGTGCACCCACAGGCTCAACACAACATGGAAGCCTCCCAGGCTTAGGGTTTTCACCCTCTAAAGCAAAGGACCAAGTTGTACCTTGGCCCCTTTTAGCAATGGCTGCAATGCAGGGCAGCAAAGCCCCGAGCCTGACCCACAAAATCATTTTTTTCTCCTAGGCTTCTAGTCTTGTGATGGGAGGGGCTGCCAAGAAGACTTCTGACATGTGCAGGAGACATTTTCCCCATTGTCTTGGCAATTAACATTTGGGTCCTCATCACTTATGCAAACTTCTTCAGCCTGCTTAAATTTCTCCCCAGAAAATTGGTGTTTCTTTTTCTTTCTTTTCTTTTTTTTTTTTTTAAATCAACAAACATTTATTTCTCATGGTTTGTGAGGCTGGGAAGTCCAATATCAAGGCACTGGCAGAGTCCATGTCTGGTAAGGGCCTGCTTCCCGGTTCAAAGATAGCTATTTTCTCACTGCACCCTCTCATGGTGAAGGGCAAAGCTAGCTCTCTAGGGACTCCTATCAGGAAACTAATCCCAGTTACAAGTTCTATCACATCATCAGGCTGCAAATTTTCCAAACTCTTATGCTCTGCTTCCCTTTTCTTTCCTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATGTTGGCTCACTGTAAGCTCTGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCTGCCGCCACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAATGCTGGGATTACAGGCATGAGCCACCGCACCCAGCCTCTGCTTCCCTTTTAAACAGAAGTTCCAATTTCAGATCATCTCTCTCAAGTTTAATGTTCCACAGATCTCTAGGTCAGGGACAAAATGCTGCCAGTCTCTTTGCTAAAGAATGACCTTTGCTCCAGTTCTCAGTAAGTTACTCACCTCCAAATGAAACCACCTCATCCTGGGCTTCATTGTCCACATCACCATCAACATTTTGGCCAAAACTATTCAACAAGTCTCTAGGAGACTCCAAACATTCCCACATCTTCCTGTCTTCCTTTGAGCCCTCCAAACTGTTTAAACTTCTGCCTGTTACCCAGTTCCAAAGCCGCTTCCACATTTTCGGGCATTGTTATAGCAGTACCCCACTCTACCAGTACCAATTTACTGCATTAATTTGATTCCACAATGTTATAAAGAACTGCCTGAGATTAGGTAATTTTTTTTTTTTTTAAAGAGAGAAGTTTAATTCAGTCATAGTTCTGCATGCCTCGGGAGAACCTTTGGAGACTTCAAATCATGGTGAGAGGCACCTCTTCAAAGGATGGCAGGAGAGAGAAGAAGCAAACAAGAAAGGAGCTGTCAAACACTTATAAAACCATCATAGCTCATGAGAACTCACTCACTATCATGAGAACAGGACGGGGGGGAATTGCCTCCATGATCTAACCACCTCCCACCGGGTCTTCTTGCTCAACACCTGAGGATTACAATTGAAGATGAGATTTGAGCAGAAACACAAAGCCTAACCATATCACGTACACATACCTGTCACTTATCTCTCAACTGAAAGCCCCATATTGAAAATGTTTTTGTGTATTTCCGTGTTGCTGGTAGTATGTTTAAAAGTTATATTGGATTATAGCTCTTTTTTTGGTTGCTTATAAAAATCCCTAAGGGAAAAATAAAGATATTATATTTCCAAAATAGCTAAAACATGATGAGTTCTGAAGAAACTCTTTTAAAATGAGTAATGGTTGACTGATAATTACAACTTTTCAACACCTAATTCAAATTGTTTTCATATCTAGAGGTATACTTTTTTCTTTCTATAGTCACATGAAATGTATCTTGTGTATAGCCAACATTATAGAAATTATTCAACAGGGTCAAAAAGCAGCTGTTCAAAAAAGCCCCAGCATGAAAAAGTTTGTGTGGATTTATAGTGATATGCAGATATTCCTTGGCTAATCCAAAGACTTGGTTTTGACTAAAAATTGTATTTGAAATGAAATTACTGGCCGAGCACAGTGGCTCATGTCTGTAATCCCAGCATTTTGGGAGGCCGAGGCAGCCAGATCACTTGAGGTCAAGAGTTTGAGACCAGTTTGGTCAACATGGTGAAACCCCATCTCTACAAAAAATACAAAAATTAGCTGGGTGTGGTGGTGGTAACCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCACAAGAATCACTTTAATCTGGGAAGCGGAGGTTGCAGTGAGCCAAAATCATGCCACTGTACTCCAGCCTGGGCGACAGAGTGAGATTCCACCTCAAAAAAATAAAATAAAAAATAAAAAAATAAAGAAAAAAGAAATTGCTTTTTTTCATAAAAACTATTATGCTATTAAGAAATGACCAAAAATTTTTTAAAAGTTGCATTTTTGTTTCTTATTTCAAAATGAGGCAAGCACTTTTAGTAAACTAAGCTCATCAGAACTTTAAGAGAATTATTAGCTTTATATGTTTATTCATAGCTGTTTAAAGGAGTATCTTAAGCAGTTAGATATTGAAGCTACTTTGTAGAAACTTGGACCCACTTCTAGCACTTTTTGAACTAGAGGATTTGCATTTCTAACTATCTATCAATTAATTCTCTCTCTCTCTCTTTCTCTCTCTCATCTGTGTATCACGGCTAGTTCTTCAAACAGAGAAAGAAGGATATCATCACATGTAAAAACTATAGAATGATTGAAAGAAGTAAAGAAAGAGATAAGTATCTTTGCTTTGTTAGCAGTTCTTTGAGGCAATAAACTATTTATTGTCTGTTAGCCTCAGTGACCAAAAAAAAATACCTTCTCCTGTGAACCACGTTTGTTTTAAAATAAATCTAAACTGAAATTCAGTTTAAAATTACCTAATTCTTAAGCCAATTTCACCACTATAGGGAAAAGTTATTTAGTACACAGTGTCCTTATCTTCTAATGCATGGCAGAGGAGGATCTATGTATAGTCTTGAAGCCTGTGAGAGTGACTTTAATTTGTAAACATAATTTTTTTCAAATAATTTGCTTTAAATTTTTAAAATATATGCTTCTATGCTATGTTATAACTATATTTTGTTGTTGTTGTTTTGTAAAACAGTTTCAAATTCTTAACCCTCAACGGTATCTTCTTATTCAATGAGAATATAATAATCTGCTGATTAATTCAATTTCAAAATACTAGAATGAATATGAGTATAACACTATATAGCAAGTTCAAGGTGTCAGAAATTTTTCTTCCTTATAATATCATGCCAGGTGGAATTCCAGGGTTCTCAAATCTGCGAATAAATATGCAGTCACATTAACAGTAATACTTACGTAATATTGAACTAATACCTGTATATGTAATGCAAAGTCACATCCAAATTAATTCTACTTGTATTTTATGATTTTAGGGGTGGTTGTTTGTCATATATGAGAAGAAAACAGTTTCCTTAAATTATTCAGACCAAGACATTATTAGGAAAGTTTTATTCTTATAAATTATTTGAAGAAGTTATTATTTTTATTTTCTTCTTCCATTGTTGTTATACTATATTTGACAAAATAAATGGAAGAGATCCATATCAAATTCTAACCTCTGAAAATATAGCACACATCTTCACTTCTGGAATTCATTGGATATAAAAACTACAGCATCTCATGTAACTGCATACATTCATACATACCTACATAAACACACACACAGAAAATTGACCTGAAAAAGTTGTAGATGGCTTTAGCTGCTTTTGTTCTTACAAGCATGTGATATATACTCTTGTTTAAACATGAAGACCAGTATTTTCTTCACATCATTGAGTAACAAAGTGCTTTTGGGTCTTTCTGTAATTAATTTTGTAGAAAATTGGAAGCCAAATGTTTACTTCCATCAATAGATGAGTGGCATTTTTTTTTTTTTAATTGAGTTGGAGCCTTGCTTTGTCACCCAGGCTAGAGTGCAGTGGCACCATCTTGGCTCACTACAACCGCCACTTCCCGGATTCAAGCGATTCTCCTGCCTCAGCATCCTGAGTAGCTGGAATTACAGACGCATGCCACCACGCCTGGCTAATTTTTGTATTTTTTAAGTAGAGATGAGGTTTCAGCATGTTGGCCATGCTAGTCTCAAACTCCTGACCTCAAGTGATCCTCCCGCCTCAACCTCCCAAAGTGCTGGGATTGCAGGTGTGAGCCACTGCAACTGGCCAATAAGTAGCATTTTTAGACCATCTCTTTTACTTAGAATAACTGGAAAATCTGGAAAACTAAATTTTAAATAAATTAATGTGTCTGTCTATGGGTATCAGGGATAGCATAAGCAGCAAATTCTTGATGGTCCAAAAACCCAGGAAATAAATAAAGCTCTGAGATGTAAGCCCAGAACTAGGCATTACTTTTTCTTTGAAGTATTTTCATTTTAAAAGCTGTGGTTTATGAGCTCAACTAATAAGCTGGGCATTTATCAAACTCATTAGGAATGAAAGTAAAATGGAAATTCAGGACCTCTCAAAAAATGGAGACTGTAGTAAATGTCGCAATGCTTTCATTTTGGACCCTTAAAATCACATGTTGGAGTAAGAGCAACCAGGATAAGACCACCTTCATAGGCAAAGAAACCCATGTTTGAATCATTAAATAATGGATTGACTTAGAGTGATCTTTATAGACAGACTTATACCTAATTTCCAACATACTATGGAAACTAACAAACGAAAACACACAAGACGTATAAGACTTGGCTGAAAAATAGGAGGTATGCTCTTTGAATGTGTTAAAAAGGCAATAGATATATTGACCTATAGAAAAGAAACATATGAGAAAAATTCTGAAATAGTAAGAAGAAAATATTTCAACAGAAACTCAAACATAAAAAGACAAAATAAAGAATTTTTTTGAAACATAGATTAGTAAGTCAAACATGCATAATTAAAATATTAGATAAAAGAAAAAATAGAGTGGAAACAATTTTTGAAAAGACAATCTTAGAGTTTCCAAAGCTGGCAAAAATTGAAGACACTGTTCCAAGAATATCAATTACTCAAATGTCTTATGAGAAAAAGAAAACCACACATAGCATAGTAAAATTGCTGAAAACCATAGACAACCAAGAGGAAATCTTAAACACTGCCATAGAATAAAGACAATAAAAATACTATAGACAACAGGTGTCTCACAGATATAGTGGAATCAAGAAGAATATGGAGTAACTATACTATGACAAAAGAAAACTGCAAATTAATAATTCTATTACCAAGAAAATAACCTGTCAAAAACTGGCAATAGTACTCACATACTAAATGAAATACTAATGGTTTTCCAGCAGAAAAAAGAAAAATAGTGTCAGATGGCAGTCTCGAGATTCAGGAAGGAAGAAATGAAAATGAAATATACTAGCAAATCGCCATTACTGTTGATTATTTAAAAATTGCAATAATAGATCATGTAATGTCCCAAACATGCCCAAATTTAAATAAACAACAGGCAAAATTTATAATATGATGAGAAATAAATGGATTTAAAGCATTGTAAGATCTTTGCACTCTCTGAGATGTAAAAGCACTTACATTAGACTATCAGTGACTCGTGGTATTTTCTGTATGAAAACTACTGAAAGTCCTACAATATTCAATTTATAAACTACTAGAGAAGAAAATTGAAATAAAAATAGAATAAAATAATAAAACGGAAAGCCGATATTGAATTGGCAAGTTAGGACCTCAATTTGTCAGTTTTATAATTAAACATCAATGCAATAAACATTCTATTAAAAGATAAAATTGAAAACCTTTGATAAAACATAATAAAAAATACACTGCTTAATACATGATATCTTAAATACAGTAAAACAGATATATTAAAAACAAAAGATGGAAAAGTTATACCCTGCAAATATTATTCAAAATAAGTATAGCTATGTAAATATTAGGCAAGATTGATTTTTAAGACAAGAATTATTAATCCAGAAAAAGGGACATTTCATAAAGATAAAAGAATAAATCTGCCAGGAAGATGTAATTATTCCAAATTTGGGAAAACTGATATAATGACCCTAAAATATGTAAATATAAAATTGACTGAACATATATAAGAATAGACAAATCTTTACTCACAATGGGATATTTTATTACAATACTTTTAGTAAGTGATTGACAAGCAAAAAAAAGTAATGATATAGAAAATTGAACATAATTATAAAATAGACTTTGTAGACACATACAAAATGCAGCACATAATCACTTCAGAATGCAAATCTGATTAAGGTATACAAAAATTCCACAAATTCATATTGATATGCTGTATCATTTCAAATAACTGAAATCATGTTGAATATGGTATCAGAGTATAATAAAATTTAACTAGATTTTTTTAAAAAAAGAATAAAACACTTGAAAATCTCTAGATGATTGAAAATTAGGAAATAAATTTATAAGTAGCCAATGGGACAAAGAATAAATAACAAAGGAATTTAAAATACGTTGTATGATAAATGATTTTAAAAACACTATAAATCAAGTTTATCAGATGCTGTTAAACAAGAAATAACGGGAAATTATATTTTAAAATAAGAAAGCCTAAATAGGAATGATCTGCTACAGAGTTGGGAAATCAAGGCCCGCAAGCAAATATGGTTCACTGCTCTTTATAAAAATACAGTTTTATGGAAACACAACCACTTGTTCATCTGTCTATGGCTATCTTCACACTACAATTGCAGAGTTTAAAAGTTTAGACAGAGACTGTATGGACCATAGAGACTAAAATATTTACTATGTTGTCCTTATAGAAAAAGTTTGCTAATCCTGGTCTATCTCAAGAAATTACTAAAGGATCAGTGAAATAAGATAATGTGAGATTAAAATAATGAAAAAAATAAATATGATACAAAATTAATAAAATATAAAACTACCATTTAATAGAAGATGTCAACAAAGACAAAAAGATGTTTTTGGAAAAAGATCAGCGTAATGAATAAATACATGACAAGACTAAATAAGAAAAAAGGTCATGCAAAAAACCAACATTAGACATTAATTGAAAATAACCTACAGACACTAGTAATTTTAAAAGATAGTAGGAGGGTACTAAGGGACAACATTTAAAGTTTAGATAAATTTGGATAAATCAAACAAATCACCAAATTTACTAAATCTAACAAAAGAGAAATATATATTACATTGAATTTATATCTATTTAATTTAAACTCTGGAATTAAACATTTTTTCCACAAAGAAAAGTGCAAGCATAGATGATTTTCATTATTAATGAAATCTTTCCAACATTTAAGTAATGGATAAATAACTTTCTTGTAGAAAATAACTAAGAAGAGAGCATAGTCCAAAAAATTTATGATAGTAGCATAACTTTGATACCAAAATATGACAATATTATAATCATACTTACAATGATAACAAATTTCCTAAGCAAACATAGGTATTGTAAATAATCATATGCTCTGGCAAGGATAATACATTACAAGAAATGGTGCTAATTCCAAAATGTAAAATAGGTTTAACATCCAAATGTCAGTTCAAATCCTATATTAATAGAAGAGAAAAGATCATTTATATCATCATCTCAATTGATAGAACAAAAGCACTCAATATAATTTCACTAATCATTTATAACAAATTCTAGCATTAAACTAAAAATAAAAAGCTCCCTTAGTCTGATAAAAGTAATTAAAAAATACTATAAAAAACATCACACTTAATGATGAAATATGGCTTTCTCCCTGAGATAGGAATGAGGTCAAGATATTTATTATCATGGCTTTTATTCAACTTTCTCACACAAGATTTGTCATGTGCAATATGGAAAAAAATAAGCACATGCCAAGTTTTAAAAAAGAGGTATAATTGGAATTTTTTAAAATAAAATATCATACATGTAAATATATACGTACTTGTGTGCATATATATGTGCGTGCGTGTATATATAAAGGTCTTGATATTTGTATAAAAATAAGATGAAAATTCAACACTATATTAAAAGTGGGGTTAGGGAATGTAATATTTACTATAGTTAGATTTGTAAACTGAAGTAATTATTGCAAATATTAATTGTATCTCTGTGAACTAGTAGGAATAATAAAAGGAAATAACTGTCTTTTATTCATTTAAGTATGCTAGAATATATTGATGGAGCATGCTATGGGCTAAATTGTATATCCCTCAAAATTCGTGTCAAAAAAATGTGATCAAAAAATGTGATCAAAAAATGTGTTGATCCCAGTACCCAACAATATTTAAAGTAAGTTAAAATTAGGCCATTCGGATGGGCCCTAATTTTACGTGAGTAGTGTCCTTGTAAAAAAGAAGAAGATTGGACACACAGAAGACACCAGATTATATACACAAAGAGAAAAAAAATCATCTGGGTACACAGCTAGAAGGCAATGATCTGCAAGTCAAGGAGAAAGGTCTCAGAAGAAACCAGATCTGCTGACACCTTGATCTTGTCCTTCTAGCCTTCAGTCTTTGGTATTTTGTTATGGCAGTCTTAGCAAATTGAGAGAGAGAAGTACTTAGAAAATCGACTTTCAAAAATCTTGTGTTTGATGCTGTAATGAAGAGAGTGAGAAGGGACTGGAGAAAAGACAGTGGGAGGAAAAGAGTCTACCGATCTTCAAAAACAAAACAGATATTCCTGGAAAGCAGTTGGGTAACATAAAGTTCAAACATTAAAAGTCCAATTTATACAGCTTATGATGAGCAATTCTACTCTGAGAAAATGCAAAACATCTGAAATAAAGAAACTCCCTACTGACTCTTCTGGTCTCCTAAGAGTACCATTTTTGCCTTTGTTTAATTTTACTTTGAATTTTAATTTTTCTGCTTGTATTTTTGCATTCCAAAATATGAAACTGATGTACTGAGGAGCCTCATTGGGATTCCTGTAACAGTTTTTTTCTTATGAAAAAGGCTCTAGAGTCCTAAAATGGGTTTCGTGGTCCAACTCTTTCGAATCTCCAGCTTGTTTAAACGGAAGATTATATATCTCCTCTATGAGTGTTTGCTTGCAAATTGAATAAAGAACTACACTTGATTAAAACAGCATTGCCAAAAAAATCCAAGCAATTCATGACCTTCCATATGCAGTCTTCTCAGACAACCAAGGGCCTTAAATATTTCACTCACTGTATCTTATGAGAACAGCCTTTCTTGGTGCACAGCCACACATAAATTTAAAGGTCACAAATTCAAGAAAAATCACTTGTAACAAGCTCCTGCAGGAATTGCTTTATAGGATGGAGAGTGACGACAGTGGTTCTTTTGTGAAAAGAACAAAGCTCTTTGCCCTTGTCTGTTATTTTGAGAAGCCTATGGCCAACCTGCTTTGAAATCCCATTGTGCTCTTGACACAGTACGTCAAACTGTTATGAGCCAGATGTACATCCTTTCAGAAGGGGAAATCAACTGAATGATGGAAAACCTGGCTCAAGTTGGATTATTACCCAGTTCTTTCTGTCTGGAGGAAGAGATTTGGAAGCAAGAGTAGGATTTTCCCCTAGAGGTACAGAAGACAGCACAGGAATCATGCTTTCTTGCTTTGGATAAGTTCCAAGTTTTTTATGTTAAGTTCAATATTTCCATCTCTCATGCACACTTATCAGTTGGCTCCCAACTTCAAATTACTTATGTTAGGATAAATTTAATGAGGAAAAGGATATATAAAATAGGAAAGTAAGCCAGAGTATCTCATAAGTTATTTGTAAAGTTAATGGAAACATGCATCTCCTTAAATAAGAGGAAGAAATTGACAGTTATGGTATATAGTTTCTACAAACATGCTCCAAAGAGGATTCCTAAGAGTAAAGCCAGTAGAATAGTAAATATTATGTGTCATCTAATTTGTGTGTATTCACAGAAAAATCTAATGTTGGTTCTATAATTATTAAGTAAAATAAACACTGAACTGGAAGCCAAACATGTCTTTCTTAGACTCATAAGGTGTTAGTTGTAAAATTGGGAAGTTTATTTAATGTATTTTGTGTTACAGACACTGAAATGAGAGAGCACAGATCATAACCTCTGAAATTTCCCGCAGGTTTAACATTCTAAATTGTTTCCCTTTGTTTTTTCTTTAAATGTAAAGTCCATTATTTTGTGATTCAACATTATACTTCCTGGATTAAGGAAAATATGCAGGTTTGTATATTGGAATACTAGTGTCTATGTGGCGATGTGTGTGTTTGTGAGAATATAGCCCACTTTTTTAAAAGTAAATGATCACTCCTCACTCACAGGCTTGGTGCTGTGGGATTATGCTCTTATTCCTCCAATCAGGGCATCTCTTGAAGAAGTAGTTGTCTCTTTCATGTAAGTAGTTCATAAAAAGGGAAAGTGGAACAGCTGCTCCCAGAGAAGAGGGCACTGCACACATCATTCAAATTGATGCTCATTCCTCTAGAGTGATCAGTTGAAGTGCTAATGAGGCAGGCTCAGAGCCTCTGGCCTAAATATTCTGAACTTTGCTTTCCCTTTTAGTACTGTACTACCTCTACAGTGCAAAATGAAAGTTATAGCTGAGGTCCTTCTCCTAAGCGGTATGTATTTTTCTCAGAACAACTTACTATAGGAAATTATAGCAAAGGCAGCGGGAGAAAACTTCTATAATGCACAAGTACCCTTTTTCTTATTTTAACTACAAAGATAAGTGACTGCCCTCCTAGAAACCCTCCTGGACAAGTCACATCTATAAGTTCTTGGGTGAAATTATGTCTCAAGAACTAAAGTCTCCTAAGCTAATTGTGATGTAAGTTTTTGTTGTCATAAGGGTTGTTTTTGAATGTAGAGAGTCTATTCAGGAATTTTAAAGTTTCCGTTTCAAAACTTGACTTCTTTTGTAGGTTTTTACATTCAGCTTGCAAATCTTAGCAGAGTATGCATGAGTCAGGCATATTTTAATAAACTTTGAATAATTCTATTCTCACCTGTAAATTAAATTCAAAACTTCTTTTTAAATATGTAGAGAGAACCTGCATATTTATTTGAATTATTCTTCAGAATTTAATTTTCAGATAAAATAATTTTCTGAGTACTTAAATAACTTTTATAAATATAAATACATATAATTTACAACTACAGTGAACCTAAAATTCTCTTAAATGTTGCAGAACCATGAATATATTTTAAAAGACTTTAAGACAAATTAGAATGTTAAATCAGCTACTGCCTTACATATCTTAAATTTAGGTTACAAAGCAGTTATTCCAAAGGACCAAGTTCTCTTAAACATACAACAGTATATGACTGCATACTTATTGTAAGCCAAAAAGTATCTGAGACAGATCTCAATCAATTTAGAAAGTTTATTTTGCTAAGGTTAGGAACATACTTGTGACACAGCCTCAGGAAGTCCTGAAGACATGTACCCAAGGTGGTTGGGGCACAGCTGGTTTTATACGTTTTCGGGTGACATGACACATCAATCAATATATATATAAGATTTACATTGGTTAGGTCCAGGAAGGTGGGACAACTTGAAGCAGGGAGGGGGCTTCCAGGTCATAGGAAGATAAGAGACAAACATATTCCTTTGAGTTTCTGATTAGCCTTTTGCTGAATGCACAATCTACAAAAATAGTCACTTATGCCTTAGTCTGGCTTAGTGAAACAATAGGGCAAAAGAAATAATTTGATATGTATTTATCTCACATGAGCAGAGGGATTACTTTGAATTCTGCCTGTCCTTTGTCCACAAGGAACTTCTTTGTGGGCAAGTTGTGAGGGAGGTTTTGTAGCTTTATTATTATTTTTAAAAATCTCTGTATCTGTCTTATTTAAAAATAGAATGGGAGGCAGGTTTGCTTTACACAGTTCCCAACTTGACTTCTCCCTTTGGCTTAGTGATTTTAGGGTCCCAAGATTTTCCTTTCACATTGTTCTCTAGCTTTGGTTTTCCTATTTACAGCTTCTTATTATACATATGTTGGTTCCTCTTTTTTAATCCTCTATATTTACTACTTTCTCACAGTTATTTTAATCTCATTTTAAATGTGGGTTTTTCCTACATTTTTATCCTAGATTTTTGATATGCTATTTTGTGTTATGTTAGTTACTCTTGTTCTCCTCATATTTCAAACTGTATTTCTAAACTGATTTTTCTCTTTCACTTCCATTTTTTTGTTGGTCTCTGTATGCTCTGTTCTCATGTCTTTCTTTGTCAAATCATCTCATTTCTGAGTTTTAAAAATTCTAATACATACAGATTAAAGTTTTTTTTAAATTTAAATATTTTCAAAATGTTAGTTTACAGTTTTATGTTTTGTGAGTACATATTTTCCATGGGAATTCTTGTTTGTAAAACAATTATTCTGTTTTATATTTCCTTTTGTATTAATATAAAGTTTGATTTTAATCATTTTCTCTGTCTTATATTTAGGTGAGGTACATATTTCTATAGGAGGTAGTTGCTGTGTAGGAATAAGAGGTTTTGAGACTGAATCTCTAGGGCTTCTTTTTTTCTTGTTACAAGTGTTATAACATTTGAACTTACTTAATTTTATAAAACATGCCAATCCTGTGTTCTCCTTCAAATTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCTCTGTCACCCAGGCTGGAATGCAGTGGCATGATTTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCTTGCCTCAGCCACCACAGTAGCTGGAAGTACAGGAGCACACCACCATGCCCAGCTAATTTTTTTTGTATTTTTCAGTACAGATAGGGTTTCACCATGTTGGACAGGCTGGTCTTGAATTCCTGACCTCAAGTGATACACCTGCCTTAACCTCCTAAAGTGCTGAGATTACAGGCATGAGCCACCGCACCTGGCCTCCTTCAACTTTTATTCAGACCTTTTGTTGTTGTACCCAAATTTCCTGTTCTATTCAATTTGGATTTGACTTTCTCAAATTTTATACTGTTGAAATGTCAAGTTGTATATTAAAATAGAAGGAAATTTCAGTAGTAAATTGCCAGAGTTTATGAAATAAAAGCATCCTAAAACTCACTGAATTTCCAGTGGTCTCTTCATTTGTCAGTAAATTGGAGACTATAAAGGTTGTTCCTAGTTTTGGTTGCTATTCTCAAAGCATGCCATTAAACTTTATACATATATTGGGGACCCCTCCATTTAAAGATGAATATCTGTTGGCTATTTCTGAGTTCTCCAGCTCTAAAGAACATTAAAAAACTGTGTTAGTTTAGGTTCTCCAGAGAAAGATAATCAATATATATGGTTCTCGGCCCTTCAGACTCTAGGAATTACAATCTGCATGGTTAACTTCAGACTGAAAGCCAGTCTGAAGTTAAATGGCTTAGTGAAGGCTCCCAGTCTGAAGTTAAACATGAGATTCAATGTCCAAGGACAGGAGAAGATGGATATCCCAGCTTAAGAAAATGGACAGAATTCTCTTGTTTTCTTCCTGCTTGTTCTATTTGGGTAGAATTTCAATGGACTGGATGATGAGCAACCACATTGGTGAGGAAGAATCTTTTTTATTGTGCCTACTGATTCAAATGCTATTATCTTCTGGAAATATCCTCACAGACACACCCAGAAATAATGTCTTACCAGCTATCTTGGTAATCCTTCACTGAGTCACGTAGAGTCATGAAATTAACCATCACAGAAACACGTTGTCTTTTCTTTCTTTCTTTTTTTCTTTTTGGCATATATGCTTTGTAACTCAGGTTTTTACACTTACGATAGCTTAGCTTGTCCAACCCTTTGAATGCAAGGACATATTTGCTTATCTGTGGTGGCAGATATCACGAAAATTATGTGTAGATTTTTATTTTATTTTATTTTATTTTTAGCTCATCAGCTAGTGTTAGTGTTAGTGCATTTTATGTGTGGCCCAAGTCAATTCTTCTTCCAATGTGACCCAGGGAACCCAAAAACTTGTACATGCTGGGCCTATTCTCTTTCTAGCTGATAGTTCATAGCAAAGCATTTTTTTTACTAGGTTTTTGTTTTGTTTGAAATTTATGTTTTGTGTTTTGTTATTTTCAGTTAATTTTAATTGTTTAATATTTATTTTCTGTGGGTATATAGTAAATGTATATATTTGTGGGGTATATGATACAGGCATGCAATGTGAAGTAAGTGCATCATAAACAACGGAGTATCCATTCCCTTAAGCATTTATCCATTGAGTTGCAAACAATACAATTACACTCTTAAGTTATTAAAAAAAAGTACTGTTAAGTAATTATTGACTATAGTCAACCTGTTGTGCTATCAAATAGTGGGTCTTATTCATTCTTTCTATTTTTTCTATACCCATTAACCATCCCCACCTCTCCCACAGTGCCCTACTAGTCTTCCCAGTCCCTGGTAACCATCCTTCTACTCTCTATGTCCGTGAGTTTGTTTTAATTTTTAGATTCCATAAATAAGTGAGAACATACGTTTGTCTTTCTGTGCCTGTCTTATTTCACTTAACATAATGATCTCCAGTTCCATTCATTTTGTTATGTTGTTGCAATTGATTGGATCTCATTCTTTTTTATGGTTCATTAGTACTCCACTGTGAATATGTAGCATGTTTTTAAAAATTAATTCATCTGTCGATGGAAACTTAGGTTGCTTCTAAATCTTAGCTATGGTAAACAGTGCTGCAACAAACATAGGAGTGAAGATATCTCTTCAATATGCTGATTTCCTTCTTTCGATTATATCGGCAACACTAGGATTGCTGCATAACATGGTAACTTTATTTTTAGATTTTTTGAGGAACCTTCAAACTGTTCTCTGTAGTGGTTGTACTAATTTACATTCTCAGCAACAGTGAACAAGGGCTGCCTTAACTCCACATCCTTGAGAGCATTTGTTATTGCCTGTCTTTTGATATAAGCCATTTTAACAGGGGTAAGATAATATCTCATTATACTTTTGATTGGCATTTATCTGATGATCAATGACGTCGAGCACGTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACAGAACGCCAGGCTGGAGTGCAGTGGCCCAATCTTAGCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCCCCGAGTAACTGGGATTACAGGCACACACCTCCACGCCCAAATATATATATATATATATATATATTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACCTCCGCCTCCCGAGTTCAAGCAATTCTCCTGCCTCAGCCCCCCGAGTAGCTGAGATTATAGACATGTGCCACCACACCCGGGTAATTTTGTATTTTTAATAGAGATATGGTTTCTCCATGTTGATCAGGCTGGTCTGGAACTCCCGACCTCAGGTTATCTGCCCGCCTCAGCCTCCCAAATTTCTGGGATTACAGGCATGAACCATCGTGCCCCGCAAGCACCTTTAATATGCCTGTTTGCCATTTGAATGTCTTCTTTTGAGAAATGTCTATTCAAATCTTTTGCCCATCTTTTGATTGAATTATTAGATTTTTTCCTATAGAGTTGTTAGAGTTCCTTATATATTCTGGTTATTAATCCTTTGTCAGATGGGTATTTCGCAGATGTTTTCTTCCATTCTGTGGGTTGTACCTTCAATCTGTTGATTGCTTTCTTTGCTGTGCAGAAGCTTTTTAACTTGATGTGATCCCATTTGTCCATTTTTGCTTTGATTGCTTGGGCTTTTGGGGTATTACTCAAGAAATTTTTCCCAGACCAATGTCCTGGAAATGTTCTTCAATGTTTTCTTATAGGAGTTTCATGGTTTGGGGTCTTCAATTTAAATATTTAATCCATTTTGATTTGATTTTTGTATATGGCCAGAGATATGGGTCTGCTTTCATTCTTCTTCATATGGATATACAGTTTTCCCAACACCATTTATTGAAGAGACTGTCTTTTCCCCGGTGTATATTCTTGGCACTTTTATATAAAAATGAGTTCACTGTAGGTGTGTGAATTTGTTTCTGAGTTCTCTATTCTGTTCCATTGGTCTGTGTGTCTGTTTTTATGCCAATCCAATGCTCTGGTAATTGTCTTATGGTTTCCTCGTTTGCCTTTACTTTTTCCTTTCCCTTTCCCTTACTCTTGTCCTTCCTTTCCTTTCTTTCTTCCTTTTTTTCCACCTTCCCTTCCTTCCTGCCTTCCTGTCTTCCTTCCTCCCTTCCTTCCTTCTTCCCTCCATCCCTCCCTCCTTCCTTTCTTTCTTTCCTTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCTTTCTTTCTCTTTCTTTCCTTTCTCTTTCTTTCTCTCTCTCTCTTTCTTCTTTCTTTCTCCTCCTCCTTCTCCTTCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCTTCCCTCCCTCCCTCCCTCCCTTCTTTTTCTTTTCTTTTCTTTTCTTTTTTTCTTGCAATTTTTTGCCCAGTCTCATGGACTTCTGGCCAATGCATGTGCAGGTTGGCATATAGCCAAAGACTCACAGAAAACCCTATGCAAATTATGAAATTCCTTCTCCCCCTGGCTCTCTCCTCTCTGGAATTGTACCCTGTAAATTCTAGTCAGTTCAGCTTCCCTGAACTCAAATTGCTGTCTCTTTCATTCAGTGAGCATGCCAGGTTCTATTTCCCTATATCATGTACTGAAAACTGGCTCCAGGCAGAAAGTCTTGGCAATGGTAGAGCTCAATTCAGTATGTTCCTTATTTTAGAAAATACTATTCTAGTGCTGCTTGTTACCTGATATCTGCAAATTGCTGGTTTTTTTTTTTACATTTTTAAAAAATCGACACACAAAATTTTATATATTTAAGGTATACGATATGAAGATGTAGTATATATTGTGGAATGGCTAGATCAAACAAATAGCATATGTATTAACTAAAATACTTATAACTTTTTTGTGTAAGAAAACAATATTTACTCTCTTTTTCTCTCGATATATATACATATATATATATAGTCACATACTTGATCAATTTTTTCCAGGCATTTGTGTCAGAAAAGTAATTTCAGACCCTGTTACTTTCTTATGAACATAAGTGGAAGGGCTATATTTCACTTTAATACCATTAGTCTTACAAAACATTCTTTCCCCTCAGGCTCAAATATGACAACCGCCTACTTGAAACACTAAAATGGCTAATACCTGTATAAAAATATCTAAAGTTATTAGTTGAGTTTACAATGCCCTTCAAAATCTCGGTCTCTCGGAGCTTATCAAGTACATCTGTGGCTTTTTCTCTTTGTAAGCCAATTTTAATTTTATTTAATCTTATAGTATTTATTGTTTTTCAAAAATCCCTTCAGATTTTCTGTTCTCAACATCTGAAATCTCTACAAGATACAAATTTAATATATGCACAAAGCATCCTGTATTTACAAATAACACTGCCAAATAATGGAAAGTCCATTATTTGTAATGTTTCCATACACTACAAAGATATTGAGAGAGATATCATTGTCATGTATCGCAGTTTGCCAAGTTCCCTTCTCAGTGTCTTTCAAATATCATCTTATTTCTTTTATTTAACTACACAAGTGTCTTCAGTTAGATTGTAGGAATACAAAAGCAGGTCAATTCAAATTTTAAGACTGATGATTCTCAAAGTTGAAACTCATGAATGCTGATAGGAGGTGGGTCTGGAAGATTTTCTCAGTTAACTATGGCTGTATATATTTTACAAACACAGGATTTAGTGGATTAAAGAGTAGCAATTTTATTATTTTTCATGATTCTGTGAGGATTCTGTGTTCTGCAGTAAACTAAGTGGCTTGGCTGGAATGTCCATAATGGCTCATTCACACAGCTGGTTGTTGGTGCAGACAGTTAGTGCAGAGTCTCAACTGGGGCTGTCAAATGAAACACCTCTGTCCTTAACTGCTTGGCCTCTATATGTGGTTTGAGCTTCTCTCAGAGTGATGACTGAGTTCTAAGAGGCATAAAGTGAAAACTGGCAGTCCTTTTAAGGCTGGAATGGAAAGTCCCATACTGTGACACATTTCATTATTAAGGCCAATCATAAGGCCTGCACAGATTCAAGAGCAGATGAAATAACGTCCACCTGTTGCTGTGAGAAATGTATATATGGACACAGAGGAAGAAAATTGTTGGAGGTCATGGTGAGAGAGTAGTTACCACAGGGAACTGGAAGAAATTCTGTTCTCTTTGATATTTCTTTGTAGTCTTCCTTCAATGTGGATTTTTGGTTTGTTTGTTTGTTGGCGGGTATGGGGTTAGAGTGTGGAAAGACCCAGAAAACCAGGAATGTTCATAGCTTACATGACTCTTTATTCCTGTTGTGGCAGCCACAACATCACTTCTTATCTATTTGAAATGTATGTATCTCTTTTTTGGGTACAGAATTTGGATAAGCTTCATATTCTCAGAGGTTATTGCAGATCTCTATCGGTAATATTATTTTCCTGATTTATTTTTGTTAACCATGTTTTGCTCTAATCTCGTAAGTTTTAAGAGTACTATTTGCCATTGTTTATCACAAGGAAGAACTTTGCCAAAACATATCAAAATGAACTTACACAAAAAAAAGTTTCAAAAGTATGTTTGACATTGTGAAAAAACTAAAAAGATTATGATTTTTAAAGTTTGTGATTTAGTTCTTTCCAACATCTCCAGGATTCAACTGTAATAGGAACATACTATTTATGTTTTGTTTTTAAAAATAAAATTAATAAAATTGAATAACTATAAACATTTTTGCTCCAGTTTAATTAAAAAATGTAATAACATATTCCCCCAAGATTGCTTTTCAAACCAAAACTATCATAAATACCACATCCAGGCAGCTAATAAGTATTTGTCTTGAGTATACAATAATTTTTAAATATGGTGAAAAATATCAATATTCTAGCCACAGTGTAAGAAATATGCCAAAAGTATGGTTTGGGTTTACCAAATATGTTTTTTTGTTTTGTTTTTCTTTCTTAGTATTAATCTTATTTTTATGCATATATGTTTAGAGATATATGTTATTTTAAATTTTGATATATGATCATATATCATCAAAAGAATTCTTATGCAAACAATAGAGATCATTCTATTTCTTATATCTACTCATTCTGCAATGAGAATTATTTAGAATCTTCTAAATAATGGGTAGATTTTTGTTGATGCCTGAGAAAACATGCTAATCAATCAGGCTCTTCAGATACAGACACACATTTATATAGGGTAGGATGTCTTCTAGCCAGGTTACAGACAAGTAAATAAATATGATTTTAAAATTATGTAAATGTATTATCTTATATAAAAACATACATTAGGAAAGTTCTTAGTGTTTCTAATTCTGTGCTAATAACATAATTAAATGCACAGATTCTTTTCATATTTCTGCTGTACAGTCCACAGCACTTTGAGTTTTCCCATTAATTTAGCTGCCATGATAGGCACAATTTGGTTATTATAATTCCTGACATCCAGTTAGAAGTGTAACATACAACAGAAAATTGAATATCTGTCTTTCGTGGTTTTTTCAGCTCTCCTATGATAGACATTTCCTCATTGGCTCCAACTGGGACAAATTATGATTCACAACAATGATCACTATTGTCATTGACTTAGACTATTCAAATTTATTTTACATCTAGAGGCAGTCACTATTATTTAGTATGTCAATTATTGTCATACATGTGCTAGTGTGTTTTTGTCTATATTCAGGGAGTTGTCAGTTACTGTTATTTAAAATTATTATCCAAAGAGAAGTCCACATTTCATAATTTAGCTATATTTGTCACTGAGCAGCCCCAGACATGTTCTTAATTAATCAGTTTTCAAAATAGATTTTTATGGAGTAAATTAAAAGTTTGTTAATTAGAAAGTTTGATTTTAGAAATGGAATTTAATTAGTAAAATTAATGAATTGGTAAAAATGTGTGATTCTGATAAAATATTGTAGTGATACTTCCACAAATATATGAACAGGCCATACAAATTTAGTAAGCCCTTGGCTTTCTTACCATTTAGAATCCTGTCTGAGTTTACTTTGGAAACATTCCTTTGTCTAGCCACCAAATACAGAAGATGGTGTTTCCCTGGTGCCTTTTGTCAGATGAATTGAACTCAGTCTGTAGGATAGGGTCATGTTACATTGAGCAAACCTTTCATGCAAAGTGAGTTTAAAGAGTGATGTGTCAATTTGTACCAGCCAAACAGAATCAATGGTTAGCATCTCTTCCCAGGGCATCAGTCAGACACTAATATTGGTTGTTTAAAATTAGCCAGGGCTACATCGAGGAAATCAGAAACCTAGATAGTGATTTTTGGTTTTGGTGTATATATGTATGTGTGTGTTTTCATTGAGCTGGCTTATTAGCAACAGAGTGAGACTCTGTCTCAAATATATATATATATATATGATTAAGAAAAAATATGGATCTAAATGACAATTTTACAAGCACATGCCTAATAACCTTCTTTCTTGACTAACTTAGCCTAGTGCAGGGCTTGACTTTCAGAGCTGTGAGACTGCATAATCTAGCATGTGTTTATCACCTCAGAAAAAGAAAAATAAATTTCATAGTTAAATTAGTTTGGCCATTCTTCTTGGAGATCCTTGATATAAATTAACCTTAAAAAGTTGCTGTGAAATCATGTGGTATAGGAGTATGTTGAAATATCCAGAGCTTTTTAAAATTTTAAATAATACAAACTCTACATTTTCTAATAAAGCAATTTATTGTGTATTAATGTGCTCATAGGAGAAATTGTGGGATGTCTGGATGGAAGAGTAAATTTTTCATCATTGATGCCTATCATTTTCTTACTTCTTTATCTGTTTATTTCTGTCTGTTGGCTACATTCTACAGAGGGGATCTCTCTGTGTGTATCAAAAGGACCACTGACATATGTAGGTTTTCATTCTCTGTGATTGGTGAATCAGAAGGTGTGCTCGGAGAAGAGCTCTAATTGGACACACTTAGATGTTGTGCTTGTCAATGAAATGATTACTGATGCCAGCAGTACTATGGTTGGCCCAGTGGTTATATGGTTGGCCACAGATGCAAGAGAAATGGGCCTTAAAGGAAGCTGAGAGATCAAGACGTGACCTCTATATATCCCACTGCATATTCCCAAACTTGTTGGAACATAGAACACTTTTCTCAAAAACACTTAATATTTTTGCAGATTCCACTCAGATATTGAAATATTTGTAACTGCCTATTGTTCACCTTACAGGGATATTAATGTGTTCACCTGTCAGCCTCCATAATTAAATTTTCCCATTAATGTGAAGTAATGAAACATGCTTCAAATTTCATATACATGCATGATGACTTGTATGTACATTGTGGTCATATCTTTGAATAAAGAAAAATAGTTATGGTTTTCTAGGCATTAGTGAAAACATTGTCAAGCCACATGATATGTTACATAATCTACTGGTAGACTTGGATTTTAAAGATTCTTTTAACACAAAAGTCAGGGCTGTAAAATCTAGCTAAGAACACTGAATAAGGAGTGCTTTGATGCTTAGCTACATAATCAAACAATGTGACAATGGGAAGTGGGAAGATCAAATGATAAGAAGTGGTGACAAATGGGCATTGATTTCAGGTCACTGAAGTGTGTCTCAACCAGTAAAGTGGCCATCCCAAGTTGTTAGGACTTTCACAGTCCATTGAAGATACAAAGAAAGTACTCCAATACTGATATGTGAAAAATGGTAAAGTACATTTTTCCTTAAATCATGTAAGATATATCCCAGTTCAAAACTGTTAATGTAAAATCCAGCAGAAATATTTCATTGTTATATTTAAACGTATCCATATGTTTATGCTTATTTTATAAAAGTTTATGTAACATGTGAGAAAGATACGATTAGAAATAGTTTAAAAATTGATTTGCAAATACAATTCGGAATTTTAGGCAGAAATTATTGAAGAATAATTTAGGCAGAAATTATTAAAGAATTTACTGAATTAAAGCTAATTCGGGGATTGAAAAGACGAATAGTCCAAACATAAGGTAGACTTCAGGTTTGATTGACTCAATCTGCACAGCAATGTCCAGGCACTTGTCATGAATATCCAAAAACTTTTCCTTTTTCATCTCTGCCATATTAGGTATCAGCTTTATATCCAGCCTAGTAGCTATTCAAGGTTTACAATGCTACACAGCAATACATATATATCTATAAATTCACACACACACATATGTGTATATATATACACATATATATTCACTGACCGTATTTATTTGTACATTTATATTTATACAAATTTACTGACTCCAAAAGAAAAATCATAGCAAAATATAGTAATGTAATATATGTATAGAATTATATATTTTTATATTATATAAAATGTATATAATTATAATATACTATATAGTATATCAAATAAAATATATATTATATATTAAATTATAAGATAATATAAATTATTATATAAATATGTAACTATATATAAATATAATTATGTATATATATAAAATTACTTTATTTTGCTGTTATTTTCCTTCAGGAGTCAGTAAATTTTCTTTAGGTAGCCACCTGTACATTTTTTCTCATGTATCATTGGTTGGAATTAAGTAATATGATTATTTATGATGCAATTACCATATTTAGGTATAAGATGGGCAGTGCAGACTATCCTGTCATGACTAAATTTGGGAAAGATGGGCACCTAAACAAAAATAGCATATTATTAAACAGAAAGAAAGAGGGAATAGGTAGTATTCATTTTGTCCATGTTTTTTCTAGGGAGGACTTTCTAATTTTAAATGTTATTTAAAAGATAAATCAGAAATCATCTTCTTGAGAAAATCCCCTCTAATTCCCTTTATCATCATTCCAGCGTGAATAGGCATTTCTCTTCTGGGGATCTATTCATAGGCTGTACCTATCATTTAGTATTTCAGTTATTTGTTTCCATGATTGGCTTTTTCATTAGTCTGTGAGTACTGTGAGGGCAGAAATACTTTTTATTCATTTTATTGTAAACAGTATGATATTTAAAAAACATCTCTTTAATGAATTGGTGATGACACAATGGCAAATTATTCATATTTGCTAAAATTATTTCCAGTAGAACCACTTAATTTTAGTACCTTAGTTCCTTTTGGTATTCAGATGTAGTAATAGGAATTTATTGTAAATGATTCTGTTTCCTAGAGTCCACTCAAAAGCATGTTAGCATAATAAAATAAATTATGAAATATAGAGTTTTTTTCCTGACTTTCCAACCTAATTTAGGGACCTCTAATATATGTCATTTTCTAGTTTTTCTTATTGGAAAATATGCCAACAGTCTTGTTTGCCATAAGACAAAACTGTCTTTATTTCCCTGCACCCATTAATGTGTATTCGGTGGGAACTCAATAAATAGGTATAGTTAAATAAATGCATTAGGAATATTTACATTTCCCTTGTTATAAAATATAACATTTATTTCTCTCTTTTTTCTCTCTCTCTGTGTGTGTATATATATATATATATGTATATATATATATATATCTGTATATATATATATATATATATCTCTGTGTGTTACCATCTTAAGGTATAAGTTGGACAGCATAGGCTACCCTGTCATACTAAATTTGGGAAAGACGGGCATCAAAACAAAAATAGCATCATATTAAAGAGAAAGAAAGGCCCGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGATGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATTTCCACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATGGCGTGAATCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTACACTCCAGCCCAGGCAAAAGGGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAGAGAAAGAAAGAGTATATGTATATATGTATATATGGCTGTGTGGGTATATTTGTGTGTGTGTCTGTATATATGTGCATGCTATTACATATATGATATATGTATATTTAGAAGTATGTTTGTATTAGTCTGTTCTCACACTGCTAATAAAGACATACCTGAGACTGAGTAATTTATGAAGGAAAGAGGTTTAATGGACTCAGTTCTATATGGCTGGGAAAGCCACACAATCATGGCAGAAGGCAAAGGAGAAGCAAATGCATTTCATACATGGTGGCAGACAAAGAGAGTGTGTACAGGGGAACTATCCTTTATAAAACCATCAGATCTTGAGAGACCTTTTCACCATCATGAGAACAGCAGGGGAAAAATCTGCCCCCATGATGCAATTACCTCCTACCGGGTCTCTCCCACAACACATGGGAATTATGGGAGCTACAGTTCAAAATGAGATTTGGGTGTGGATACAGCCAAACTATATCATTCCACTGCTGGCCCATCCTAAATCTTATGTCCTCACAGTTCAAAGCCAATCATGCCTTCCCAACAGTCCTGAAGGTCTTAACTCACTTCAGCATTAACTCAAAGGCCATAGTCCAAAGTCTCATCTGAGACAAGGTAAGTGCCTTTCACCTATGAGCCTGTAAAATCAAAAGCAAGTTAGTCACTTCCTAGATAAAATGGGGGTAAAGGCATTGGGTAAGCACAGCTATTCTAAATGGGAGAAATTAGTCAAAACAGGCTACAGGTCCCATGCAAGTCCAAAATCCAGTGGGGCAGTCAAATCTTAAAGCTCCAAAATAATCTCCTTTGATGCCATGTCTCACATCCAGGTCACGCTGATGCAAGAGGTGGGTTCTCATGGTCTTGGGCAGCTCCACCTCTGTGAATTTGCAGGGTATTTTCATGGGTTGGTTTTGAATGTCTGTGGCTTTTCCAGGTACATAGTGCAAGTTGTTGGTGGGTCTATCATTCTGGGATCTGGAGGATGGTGGCCCTCTTCTCACAGTTTCACTAGGCAGTGCCTCAGTGGGCACTCTGAAGGCTCCAATCCTACATTTCCCTTCTACACTGCCCTAGCAGATGTTCACCATGAGGGCCCCGCTCCTGCAGCAAACTTCTGCCTGGACATCCATGCATTTCCATACATACTCTGAGATCTAGGCCGAGGTTCCCAAACCTCAATTCTTGACTTCTGTGCACCTATGGAACCAACACCACGTGGAAGCTGCCAAGACTTGGGGCTTACCCCCTCTGAAGCAATGGCCTGAGCTGTACATTGACCTCTTTTAGCTGAGGCCAGAGCTGAAGCAGCTGGGACACAGGAAACCATAGCCTAAGGGTGAATAGAGCAGGGGGTCCTTGGACCTGGCACACAAAACCATTTTTCCCCACTAGGCCTCCAGGCATGTGATGAGAGGGGCTGCCATGAAGGTCTCCAGGCATGTGATGAGAGGGACTGCCATGAAGGTCTCTGACATGTCTTGGAGACATTTTCCTCATTGGCTTAGTGATTACCATTCAACTCCTTGTTACCTATGGAAATTTCTGCAGCCAGCTTCAATTTCTCCCCAGAAAATGGGTTTTTCTTTTTCTATTGCACTTTCAGGCTGCAAATTTTCCAAACTTTTATGCTCTGCTTCCCTTTGAACACTTTGCTGCTAGAAATTTCTTCTATCAGATACTCTAAATCATCTCTCTGAAGTTCAAAATTCCACAAATCCCTATAGCAGGAGCAAAACACCACCAATCTCTTTTCCTTGCAAGAGTGATCTTTACTCCAGTTCCCAACAAGTTCTTCATCTCCATCTGAGACCACCTTAGCCTGGGTTTCATTGTTCACATCACTACCAGCATTTTGGTCAAAGCCCTTCAACAAGCCTCTAGGAAGTTCCAACCTTTCCCACATCTTCCTGTTTTCTGAGCCCTCCAAGTCTCTAGGAAGTTCTAAATTTTCCCATATTTTTCTATCTTCTGAGCCCCCAAAACTGTTCCAATATCTGCCTGTTCCCCAGTTCCAAACTCGCTTCCACATCTTTGGTTATCTTTATAGCAGCACCCCACTACCCAGTACCAATTTACTATATTAGGCTGTTCTCACACTGCTAAAAAAGACATACCCAAGACTGGTTAATTTATAAAAGAAAGAGGTTTAATGAACTCACAGTTCCACATGGCTGGGGAGGCCTCATAATCATGGCAGAAGGCAAAGGAGAAGCACATGTCTTACATGGGAGCAGGCAAGGACAACATGTGCAGGGAACTCCCCTTTATAAAACCATCAGATCTCGTGAGACATTTTCACTATTATGAGAACAGCAAGGGAAAGACCCGCAACCATGATTAAATTACCTCCCACTGGGTCCCTCCAGTGACACAAGGGAATTATGGGAGCTACAGTTCAAGATGAGATTTGGATGGGGACATCCCCAAATCATATCAATGTTGTTGGAAATATCAGCAAGTATCTTAGAGGAGAGCTCAGAGAAATACTATATATCTTGGCAGAAGTCAAGAGAATGGCCATTCATTCCAAGTTAGATCAGCTGACTGTAAGCCTCCATTGGTGGCAATCAAATGAGAGGTTCCCATTCTCAGATAGAGCAGATCTTTGATACTATAGATATCCATCACCAAAAGTAAGTGAATGTCTTGGAATAAGATCTTCACTTTTGTTAGTCTTGATACCCATCAACAAGAGCCATGTGGGATCCTGTGAATACTGAGTGCTTCAGGCCAATACACCTACTCTTCTCTCCCCTCCAACATTCATGGCTCACTGTCACTCTTTGTCTTGGAAATATGAAGTATAATCTCATTATGGCATTTAAATCTGTCCCTGTCATTCACCAAAAGGACCTCAATTCTCCCTTTCACCTAGGATTCCAATTCCCATAGGACTCTGTACATAGAATTTATTGATTTCATATACTATCTCATGTCAACTAATAAAATGCTTACACTGAACCATCTGTAAATTAGAATCAGTCATCAGCAAAATTTGTTACACCTTGCAGCTCTTCTTTGAACAATACGTTTCTTTTTTTCATTCTAAACCCAGGTTCTGTTTTGAGGAGACTATTTCAATGAAAAAGTGTTAGTGTATTGTTTTCTCCATACCTCTTGTTTTATAGAAACTGGAGGTGGAATAATTTTCCTCCTTGTTCTCATTGTCTGTTCCAAATTGCTCTTTTTCCCTCTACTGGAAAAAGTCAATCAGCGTGAAATCAGACTCTACCACCAACTGTTCCTGCTTGTTTTCATTATCTGCTAATCCTTGGGCCACTCTCCCTCATGTTCTGGAAAATTTAGCTCCCACTACAGTTATACTGTATTCAACACGACCTTTGCTATAAATCTTGGTGATTTCAATGCCCGCCTGAGTTATTTTCCTATTACCATGGCTTCTCAGTTCTTTGATGTTACATCTTCCACTTGTTAGGTCTCCAACCTCATCTCAGACATTTCCATGCAAAATCGTATTCTAGATGTCATTAGCAATTGCAGATACCACATTATTCAGCCATCATATACCATTCTTCTAATTTTATTCATTGAATATACTTTAAAGCTTATTGGATGCTGCAAAGTATTGATTCCACTAATGTCCCTTTCCCTCCTTCTGGCCTTGTTTCTTTGCTTACAGTTTTGACCCATGTTCATTCAATCATTATACTACATACAGGCATTTCCCCCCCTTTCATGCTTTTCTGTACTCATGTTTGTAAATCACAAGACTGGACAAATCAAATCTCTACTACATGACACCTGCATCCACAGAAAAACATGGATAAAGGTAAACACAAGACCGTTGTTACAATTCTCAAATTAAATTTATGATCAGTTACCTCAAGTGGTCCCTACCTGACCAACGTCAATAGGCAATTGTACAATATTTCCCTAGTCTTCATTCTCTTACATGATCCTACCAGTGCTGCTTCTTTCCTATAACCTACACCTTGGTCTTTACCTTTATTTTCAAAATATGATGTGAGGGAAAAGAAGCAACCACAAGAGAAAATCTAAAATCTCCTACTCCTACTACCTTCCTATACTACCCACTTACCTGTACATAAATCTAAATACTCTGCCTTTTCTGTGTCAAAATGAATAAACAATCTATCCTCCTTACAAAGGGAACTCCTCCATTTGACACTACACCTCATCCCTTCTCCCCCAAGTGAGAACATAGGAATATTTCTTTAGCAATCTTACTGCCTTGTTCTTACAAGATTAGTTTCCTCTCTACCGGATCACACCCAGCAGCATAAAGACCAGGTGTTATTCTCCCAGCACAAACAAGCCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACAACAAGCCTTTTTAAAACCAATTTTCATGCCAGTTTTTCCTTCTGTTTACTATAAAACTTATTAAAAGAGCTTTTAAAAATTGATCTCTATAATTCATCTCCTTGCATTCTTTTTTTCAACCCACCCCTTTCAGTCTATTGTCAGCTGAATTTCACTACAACTGCTATTATCAAGGTCACCATTGATCTCCAAATTGCTATATTCAAAGACCAATTTTTTCTGTCCTCATTTCATTTAACCTTTAATAAATCTTTGGTAAAGTTGACTATGTTCTTATACTTGAAGCACCTTGTCTTCTAGAACATAGCTTTTTAATTTCTACCTCTCTGAGCACTCAGTACACTTTGCTGGCTTTTCTATAACTATTTGTAAAAATACCCCCTAGTATTAACTTTTGCTTATTTTTTTTAAATACCTATACTTCCCTCCTTGGTGATTTCATTAAATCTCCTTTCTTCAAAGAACTTTTACAGGCTGGTATCTGCAGTATGTATTTTCCTAACACTGACATCTTTATTAAATTCAAATTCTTATATTCATATGCCTATTCAGTATTTCAGAGTGATCTAATTCAGTATGTACAAAATAGAACTACTATTATTTACCCTAAATGTGTTGTTCTTGCAATTTTCCCGTACTAATAAATGAACATTTAAAAACAAAATCCATATTTGATTATAGTCATATCTGATCATTATTAATACTTTCTTTGTTACTTTCTTTGTCCAACTACTGCTATCTCTAGACTAGCTTATTGCAAGAGCTTCCTAACTCTTTTTCCAAAAATTGAGACTGGGTCTTGCCCTGTTGCCCAGGCTGTAGCACAGTGGCATGATTATAGCTCACTGAAACCTTGACCTTCTGGGCTCAAGCAATCCTCCCACCTCAGCCTCCTGAATAGCTGGGACTACAGGCATGTGATAGCACACTCGGCTAATTTGTAAAATTTTAGTGGTGATGGGGTCTATCTATGTTGCTCAGGTTAGTCTCAAACTCCTGGCCTCAAGTGATATTCCTACTGTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCAGGCCCATCTCTTAAATTACTGATGACTTTGCCTTCCTTACATATGTTTTCTGCAGAGGAACCAGAATGATTCTGTTAAATGCGAAACATATCTTGTGATTCATTTATTCAAAACTCTTAAATGTTTTCTCATCTCCCTTGGTAAAAGTCAGAGCTCTTATAATTGTCAAAGCAAAACTGACACCAAAGTTAAACTGGCAAGGAAGACTTCATTCAAAGCTATTGCAATAGAGGAGAGAGCCTGAACTCAATTCCAAGGAATTAAAGGTAAGAAGGTTTTTAAGCACTGTGGTTAGCTCATGGAAAATGTGCTAGAGAATGTTAAGCTATCTGTATTTGCTAATGGTCATCATTCAGGGAAATAGTAAGTTTCTCATATCTTCACGACAGCAGGTAGTTTTGCAACTTGGAACAAAACAATCACCAATGTTACGCTTCTACAACTCCTACAAAATTGGGCTATAGGAATGTTATTTTCCTTGATGGTTGTATTTCAAAATAATAGCTCACAAGTCCTTGAAGAAGACATTCCTGGTTATTTAAAATGGCAAGAAGCTCTATAAAAGGATTTTCACCTCAAAGGGCAGAGAAAGGATTTATAATTACAAGTTTCCTAAGTAAATAATCTAAGAAAAGAGAGCTCAAGAGCCTGAAAATTAGGAAGAAGGCAGTCTAAATTTAAATCAAGTGGAAAAAAAGAAACTTTAAGACTGTTTTAGTCACAATGATTTACAAAGCACGCGATTATAGTTTTTCACCTTACCTGTCTCATCTAATGTCTAACTGAACATTCTTTTACTCATTGTGCCTTACTGTTCCTTGAATACACCAAATGCATACTTCCCTAGGGTTTTTGTACTTACTGTTCCCTCTATCTGAAATGCTCATGGTCGAATATTTCCATAGATTGCATTTGTCTTTCTTTTGGTTTTTCCTTAGATGTTATCTTCTCAGTGAGATCCTCTCAAGTCAGTGCTATCTGAAATTGCATCCCTGACTTTTCCTAGTTCATTTACTTTTTATATTTTGCTCTTTATCACTGAATGTGCTACATATTCTAATTGTTTTCCTTTCTTTATATTTTTTATTTTTTATAATTTTTAAGTTAATAGTGTTTAACTTTGATAATGTTAGAAGTATCTGCCTGTGTTGTTCATTACTATGTTGTCAGTGACTCTCACATCTGGGAATGTAATAGATATTTGATGAAAAAATGAATGAATGTGAAGAAGACAGACCTTGAGTTGAGATCTCTAGTTTAGGGTTCTAATCTTGTCAATTACTTGAATTTAAAAAACTTGCATAATTTACTAATTTTCTTTATTCATTTAAAATAAGAAGCATGACCTACAGAATCTCAAGTGACCTACTTATTCTTTTAACAATTTGTAGCACTTAGTACCAAGATATCTTTTTATCATTTCACATATTTTAGCTTTTATTCTTCATCCTGTGTGTTGTTACTGTTATAGTCACTATATTATAAATGAGAAACTTGAGATATAACAATATGTGATTGAAGTCATATAACTAGTAAAAATGAGAAACTTGATTTGATACTACACTGTCAAGCTCCAAAGTATATGCTAAGTGATGATTTTATGCGACTATACGGTTACATACTTTGATTTTTTTCTGAGTTAAATACTGTACTTTATTTCTTTTTACTATTAATATGAACATCAGTAGGTATTCACTTAAAGTATCTACTATGAATATATAATGTGTGGGTTTACACATATTTGTATATACATATATACACATATAAATTTATGTATACAGTTACCTATATATGTATACATTTGCTTTATATATACATTTACCTACATACATGTATATGTATATATATAGTAAATGTACATATATAAAATATGTGTAAATTATATATATATATAAAGTAAATGTACATAGTCAAGTTGAATCCTACATTGAGTTTTGGAGAGTATAAAGTTATCTTAGAGTTTATCAATCCGAGAGATAAGTCAGCTGACTTTTCAAAATTCTACTCTGACAATCATTGGCTGCAGGATAAGCAAAGGAAAGGTAAAATCTCATGCACTTTGAAACCTCTGTGCATCAGTCTCATGAGTCTGAAACAACTCTAGTGGCTCCACGGATGTCTTCTGATAATGGTATGCTGCCATTCCTTAGAAGCTGAGGAATTGCCCAGAAATGCTAAAAGGAATCCATTGGAATAGATTTCTGTTGGAGATATCCAAATGAAAAAGTTCTGTTACTGTTTTTATTCAGAAGTCTCTATATACTATAGCATTTAGCATCCATATACTATAATTATGGTATCTCTGTGTCATAGTGAGATCCTGGGAGAGGTTTTTATTATATTTTTATTATATGTCTCTGCTTCCACAGTATTGCTCATCTTTGAAAACTAGACTTAATATTTCTAAAGACAGCATTTTACACTTTCAAAAATTGTTTTTGCCACAGTTTGTGAAGTGAAAAACAGGAAGTAGCATGTGACACTGAATAACTTAAAATCTGCTTTTGTCTCCTTAATACAAAGAGAAATGTCTATCAAATTTCAATTTTAGAGTTTACTTGCACTACTTTCTCAACCAATTTCACAGACAAGCAATTTTCCAGTGATGTCCCAAGTGGAAAAGTAAAATACTTTACCTTTTTTTTTTTGACAACTGGATAAAATCAGCTATCAGTGGCTTATCCATGATTATTCCTAATTTTTTTCTGAATTTCCAGCTATATCCAGTAAAAACTACTTATACTTCCAACAATAAAGTACTACTGAGTGATTTGATCATTTGTGCCCTGTCTTCCCTAGAATTTCATTAAGTGGTTGAAGTTATTTTCCCACCATCGTGCAACGGAGTTAACTTTTCTTAAATAATATGGCACATTTACCTTTGTTTTCTTTGTAAAAATAGATATTTGACGACATAAGGTCTAGTATATCCTCACATATATCAATTCCAGAGGTCATGAATAACTAAAACTATAGATATTAATAAGTAAACCAAACAATAAAAATCAAATACATAATTATAGACTACAAAAAATGGGTCGAGTAAACAAATATAATTATTTTATTAGCTATAGAGTGAAACCACATCTAATTTTAAAAACATTTATCTAATTTGCATACAATTTTCTCAATTCCAATGTCTGGCAAACTATTTTTTTTGTACATAATTATATTAACAATTGCAACACATGCATAACATTGTAAATTGACTTTTAGAGCGATTTTAGGTTTACAGAAAAATTAAACAGAAAGTGTAGAGTTTTAATATACTCTTTCCTGCCCATTTTTTCTTATTATTAACATTTTGAAGGGGTGTGGTAAACTTGCTAAAATTGATGAACCAATGTTGATACATATTATTGACATCAAGTCTATAGCTTAATTAGCATCCGTCTCTGTGACATACAGTGTTAGGCATAGTGTTATGAATTTGCCATTGTCGTATCATACAGAATAGTTTCACCACACTGAAAGTGCTTTGCATTCCACCTGTTCAACCATTCTTCTGTCTCCCTTAACCCCTGGCAACCACTGATCTTTTTACTGTTGTCATAGTTGCACCTATTAATGTATCACATTTTCATTAATGACTTTTACATTCTTTACATGCCTACAAATAAGTTGATCAAGGGAATTATTGATATCCTAAGGCTTTGATTTAAAGGCTGATTGTGACCCAGACTAAAATGTTGTCTAGTCAGAAAATACGATTCATTTGTTTCCTTTTTCCCCTTCATGACTGGAATCTTGGCCATAGGATACGTGTCTTGGTGAAAATTCCATGCAGTAGAAAGTAAAATAAAGATATGAAAACTTACTTGAGAAAAAACTAGGAAGTAAGAAACTATTTCCAGGAGACAGAAAACCAGCAGTGATTCAAGTCCTTTTGGAAGCCTGTCTAGTGAAACAAGATAGCAATGTGATGACTAAGAAAGCAAAACCATGGATGAATAAAAGAGGAAACAAGAAACGCATGTTTTTAAATCCAAAACACCAAAAGGAGGATTTTATCTGTAGACCAAATGAAAAAGGATGAGATGTACTGAATCATTTGTCTCTTACATGAAGAACTCATCTGTTTAGAGATACAGCGAATTGAATAAAAAACACTGATGGCACAGCTTCAAGATGGCTGACTAGATGCAGCTGGAAAGTGCCTCTCGTATGGGGAGAGACTGAGATTTCTACTAAATCAACATAATTTGAAGAGATCTTCAGAACGAAAAGACCAAATGTAAATGAAAAAAAGACACTGATTTCTAGGCAGAAGGGCAAGGATTCTGATAACCCCGCATGGGGTTCCTGAATGCTAGGGCTGGCTCTTGGCCCCAAATGGCTCCTGGGGGAGGGGTGAGTGAAGAGACTGCCACTCTTGCCATAGACCTCTGGCATCCTAGCTCTAGGGGACCCAACAACCTCCATGGACGTTTGAGCCGGCAGAAGGAATCTCCTCTGAGATCAGACAGAGAGAGAGAGAGAGAGGGAGAGAGCTGAAGCAGGCACAAAGCCAGGTATATTTGTGTAAAAGACAGCTCTAGTAGAGCCCAGCCATAAATGCCCATCCCCCAGGGCTCCCCATCTCCCTATTAGAGGCTACTAGCCCCAGTTAATCCCCAGACCAGTAGAAAGTAGGGCCAACTTACCCCTGGGATGGGGGCACATCTGTCCTGCAGGACCACCTCCCTGCCAGGTCCTCCAAGGGCTCCTATCTGGCTGCCCAAAGGAAATATGTACATAGTGCAAAGTTTTCTGCCCAGCCTGACTGCATTGCTCCACCAGAGTGCATTTGAGCAGCCTGCTAACCTTTTGGATATCCCAGCAACCAGAATCCAACACTGAGGAGGGAGCTACAAGCAATTCCTAGCATACCAGGGCTACAGCCCATGGGTCAGGAGTGCTGAACCAGGACCTGTGTCTGGCAATTGAGTAAGAGGAGCCCACACTGTCAGAAAACTGGAAGGGGTAAGTTGCACAGGTGTGTGGGCTGGTGTGGCATGCCCCCCTTCACAGGGCTGGTACCTGCCAGGCCTCTGTCTGAGGGAGCTCTACAGCCCACAACACCTAACAACAACAATAAATTGAGGACATAGTGCCAGGGATTGGAGATGCCCCCCTCCAAGGCCCAGAAGTGGACCTGGTGAGGGGTTACCTCTCTCTCACTCTCACTGCAGAGCACAGCTGCCAACAGGAGTATACAAAAAGAAGCCATACAGCTACCAGATCACAGCCCAAACTAAAACACACACACACAGACACACACACACACACACACACACTTGCTAATACTCCTCTGTGCTGAATTAAGGGCAAGAATTAAACAATAAATAAAGACCCTATACAGAGTCTTAGCCCTCTGAATACTTTCATAAACAAAGCCAACTGAGGACACTAAATTTATACCATAGTTAAAGGGACACCAACACTTCCAGTTGAGAAAGAATCAGCTTAAGAAAGCCAGATTGTAACTTAACTCTAAACAAGCCCACTAGCTTCCCAGCAATGATTCTTAACCAGTCTGAAATGTCTAAAATTGCATATATGGAATTCAGAATCTGGTTGGCAAGAGAGCTCACCAAGATTCAGGAGAAACCTGAAATTCAATGCAAGGAAGCCAAGCAATCCAGTAAAACAATTCAAGAGCTGAAGGATGAAATAACCATTTTAAGAAAACCCCAACAATTGGAAGTATGAACAGCAGAATAGATGACGCTGAGGAAAGAATCTCAGAGCTCAAAAATCAGCTCTTTAAATCAACTCAGTCAGGCAAAAATAAAGAAAAAAGAACTAACAAAAATGAACAAAATCTTTAGGAAATATGGGATTATGTAAAGAGACCAAATTGATAACTCATTGGCATTCCTGACAGAGAAGGACAGAGAATAAGCAACATGGAAAGTATATTTGAGAATACAGTCCATCAAAATTTCTCTAGACTCACTAGAGAGGTTGACATGCAAATCCAAGAAATAGAGAACTCCAGCTGGATACAATTCCAGATAACCATCCCTGAGGCACATAGGCATCAGATTCATAAAGGTCAACACAAAGGAAAAATATCATAAAAGTAGCTAGAGAAAAGGGGCAGGTCACTTGTAGAAGGGACCCCCTCAGGCTAGCAGTAGACCTCTCAACAGAAATCCTACAAGCCAGAAGAGATTGGGGGCTAATTTTCAGCACCCTTAAAGAAAAGAAATTCCAACAAAGAAATTCATGTCCCAACAAACTAAGCTTCATAAGTGATGAAAAAATACAATTCTTTTCAGACAAGCAAATGCTGAATTGAACACATTTCTACTAGACTGGCCTTACAAGAGGTATTTAAGGGAGGGCTAAAAGTGGAATCAAAAGAATGACACCTGCTACCACAAAAACACATGTAAGCACATAGCCCAGAGGCACTATAAAGCACCTATCCAATCAAGTCTACATAACAACCAGCTAATAACACAATGATGGCTAGTTTCATACATATCAATTTTAGTCATGAATGTAAATGAGCTAAACACCCCACTTAAAAGACACAGAGTGGCAAGTGGATAAAAAGACAAGACCCAACCATCTATTCTTTGCAAGACACCCATCCTATGTGCAATGACACTTAGAGGCTTAAAGTTAAAGGATGAAGAAAGATCTACCATGTAAAAAAAGAGCAGGAGTCACTATTCTTATATCAGATAAAACAGACTTTAACCCATTAAAAATTAAGAAGAATAAAGGCCATTACATAATGATAAAGGGCACAATCCAACAAGAAATTTTAACTATCCTAAATATGTACATGCCCAATATTGCAGAACTCAGATTTATAAAACAAATTCTTCTTGGTCTACAAAAAACTTAAACAGCCACAGAATAATATTGGGAAGCTTCAACACCTCACTGATGGTTTTATGCAGATCACTGAGGCAGAAAACTAACAAAGAAACTCTGGACTTCAACTCGACTGACTTGACCAATTGGACTTAATAGACATCTACAGACAATCCACCTAACAATCATGGAATACACATTATTCTCATCTGCACATGGAACTTTCTAAGATCAACCACATGCTCAGTCATAAACCAAGACTCAATAAATTCAAAAAAATTGAAATCATACCAAGCACACTTTCAGACCACAGTGTAATAAAACTAGAAATCAATATCAAGATCTCTCAAAACTATCTAAACACACTGGAATTGTGTTGGAATCAAACCACTTACTCCTGAGTGAACATTAGGTGAATAACTCCTGAGTGAACATTAAACTTAAGGCAGATATTGTTTTAAATGGCCATACTGCCAAAGCAATTTACACATTCAACATTACACCTGTCAAACTACCTATGTTATTCTTTTCAGAATTATAAAAAAACTATTCTAAAATTCATATGAAAACAAAAGAGAACCTGAATAGTCAAAGCAATCCTAGTTAAAAGGAACAAAGCTGGAGGCATCATACTACCTGACTTCAAACTGTACTATAAAGCTATCATAGCCAAAAGAGCATGGTAATGGTACGAGAATAGACAAATAGAGCAATTGAACAGAATAGAAAATTCAGAAATAAAGCCATACACCTACAATTATCTGATCTTCGACAAGACTGACAAAAACAAGCTACAGGGAATAACTGGCTAGCCATTGCCAAAGACTGAAGCTGGACTCCTATCTTTTGCCATATACAAAAATTAACTCACAATGTACCAAATATTTAAATGTATTACCTAAAACTATAAAAATACTAAAATACAACCTAAGAAATACTCTTCTCAACATCTGCCTTGGCAAAGAATTTTTGGCTAAGTCCCCATAAGTAATTGCAACAAAAACAAAAATAAACAAGTGAGACCTAGTTAAACCAAAGATCTTCTACACAGCAAAAGCAACTATCAACAGAGTAAACAGACAACCTACAGAATGGGGGAAGATATTCATAAACTATGCATCCAAGAAAGATCGAATATCTAGAATATATAGGGAAGTGAAACAAATCAACAAGGGAAAATTAGTCTCATTGAAAAATGGACAAAGGATGTGAACAGACACCTCTTGAAAGAAAACATATAAGTGGCCAATGAACACGAACAAAAAAATGCTCAGCATCATTAATCATCAGAGAAATGCAAATCAAAACTGCAATGAGATACCATCTCACACCAGTCAGAATGGCTATTCCTAAAAAGTCAAAAAACAACAGATGCTGGTGGGGTTGTGAGGAAAAGGGAATGCTCATACACTGTTGGTGGGAGTGTAAATTAGTTCAGCCACTGTGGAAACCAGATTGGAACTTATAACAGAGTTTATCATATAACTTTAGGCATTAAAACAGAGCTACCATTCAACCCAGCAATCCCATTGCTGGGTATACACCTAAAGGAAAATAAATCACTCTACCAAAAGGATACATGTACTCATATGTTCATCAATGCACTATTCACAATAGCAAAGACATGGAATCAACCTAAATTCTCATCAACCTTGAAATGGATAAAGAAAATGTGGTACATATGCACCATGGAATACAGTGCAGCCATAAAAATGAATGAAATCATGGCCTTTGCAGCAACATGAATGCAGTTGGGGGCCATAATCCTTAGCAAATTTATTCAGGAACAGAATACCAAATACCACTCTCACTTATAAGTGGGAGCTAAACATTGAACACACATGGACATAAACATGGGAACAACAGACATGCAGACCACTAGAGAGGGTATGTAGAAAGAGGAAAGTGGGTTGAGAAACTACCTATCAGACACTTTTCTCACTACCTGGGTGATGAGATCTGCCATGGTTAATATTGTGTCAACTTGATTGCATTGAAGGATGCCAAGTATTGTTTCTGGGTGTTTCTGTAGGGGTGTTGCCCAAGGAGATTAACATTTGAGTCAGTGGACTGGAAGAGGAAGACCTGCCATCGGTGTGGGTGGGACACACCCAATCCACTGCCAGTGTGGCTAGAAAAAGCAGGCAGAAGAAAGTGGAATAAGCTGGCTTGCTGAGTCTCCTGGTTTTCGTATTTCTCCCATGTTGAATGCATCCTGCCATTGAACATCAAACTCCAAGTTATTTGGCTTTAGGACACTTGGACTTATGCCAGTGGTTTGCCAGGGGCTCTTGGGCCTTTGGCCACAGACCGAAGGCTGCACTGTCAGTTTCCTTAATTTTGAGGCTCTTGGACTCGGAATGAGCCGTTACTGCCTTCCTTCCTCCTCATCTTGCAGACAGCCTATCGTGTGACTTCACCTTGTGATTGTGTGAGTCAATTCTCCTTAATAAATTCCCTGTCATGTATACATGTATCCTATTAATTCTGTTCCTCTGAAGAACCCTGACTAATACAGGATTCATAACCCAAACGTCAGCATCATGCAATATTCTTATGTAACAAACTTGCACTTGTACTCTCATATCTAAAATAAATTTTTAATTGATAATTTTGTTTTGTTTGCTATATTATGTTTTTCTCTTAAGTAGAAATCTTATTGTGTAAAAAATTAAATGTTAAGTCAGTAGAGAAATAAATTATTAGAGGCTCTAAAATTGTGCAGGAAAAGTGGATTACATTTGTATGATAGTAAAAATATTAAATAAAATAATGTGAATTGGAAACCTACTAATTTTAAACATTTTTAGACTGTATATAAATAAATTCAAATATATTTCAAAAATTATAGTCTACTGTAAATTTGAAAAGTTTGTGAATTTCAATTTTTCACACTTTTATATTAATAATTATATAACAGTTTACTTATATATTCTATATTAAACTTTAAAAATTGACAAATAATGAAAATTATCAATTGAATATATGGCCCCAAATTATATTACCTTGTGTTAAAATGGGAAAAGATATTGACAATGCAATGATACTTTCTTGATTTACAGCTACATAGAATAATATGAATTAATCCTATCAAGACAATGTTGAGCAAAAAGAGAAAATAAGTGATGATATTTTTAAAAGGTAAAATTATGACTCATGCAAACATAAAATGAATATATGCCAAAGATTTATTTAACTCCACAACTAATGAATGAGCTAGCAGTTTGTTAAAAGAAGGATTTAGAGTACTAAACATTTGGAAATATTGAACAGATACAAAACTTCTTAATTTGAAAGGAAGGATTTCTGGAAGAAATCAAGTTTTTCCTCAGCAGACAAATTATTTGAATATTTATGAATTAAGGTCAATTTTATTGCTAGAAGTTATTTATCATTTACAAAATTGCAAAACTCTTAAAAACAGTGGAAGACTAAGATAACCTGGGAGGTTGCAATAGAAAGAACATTCAATAATCTTCTTCTTTATTTTCCCATTTTACTTATTCCCATTTTTTTTTCTGGACAGGCAAAACAAGGTTGATTAATCTCTTTTATTTTGGTAAGAGTATGACTTAGCATATAGAATTTTTAAAGTTTATTTTACAAATCCAGGGCCATGCAGCATTGAACAATTGAGCAATTCCTAGAGCCAAAAAATTGATACCCAATGTTATGACCTACAAAAACTGAGATAATAAATGGGTATTGTTTAACCCACTAATCTGACATAATTTGATATACACAATAAATAATATGCATAGACATCTGTATTTGTATGAAATTCCATGTGTAAGTCTTATGCACATTCCTATTAAAAATTAGCCTAAAGATGTTAGATTAAATGTAATTATTGTGGCAAAGTAAAAATTTTAAACAATAAATGAAATTTTGACTAACAATACTATTCTGAAATTTCCCAATATCATCACATAAAACACTACAGTTTCCCTGATCAATATAGGAATATTTGACAAAACTATTTCATAAGAGTCTTGATTATTTTTTCCTGAGGTTAAAAATAAATGATGAAGAAAGTTAAGGGCATTAGTAGATCTCCAGGGACAATCCATAAAACATACAATTTCTAAAATATTACTACTGGTGACATTTTATCTACAAAATTTAACCTAGGAAGACTATCTATTGTGACTAAATAACTGTATCCATGAAACTTTGGTAATAAAAACACATCAAACATAGGCAATTATTTCTGTTATTTCTTTTTAAAAAGTGAAAACCTAATGTTTGTAATTTCCCAAGGCACTTATGAAAATTTAAAGATAATTTTAGGTATAAAGAAAAGATATCCTGAAAGTTGTTTTTTCTTTTTTTCCTTCCTTTTTATAAATTTTGAATCTGATTTTTAAAAGGCTATGAAAACCTCCAAAAAAGTTGTGAGAAGAGACTGAACACTTAAGGACATAGGTGCCTGGAACACAGCACTCAGTTACCTATTTAATCAAAACTACAATGAAATATTTAAAAACAAATATGTAAAATATAATCACAGTAAAAACCTCAGCTCTTTCTTTGACAGGAAAACTTTATTCTTTGTATACTTTTTCTTAAATTATCAAGGACATAGTAAAATCAACATAAAAAACGTAAGACTATTCTGGTAAAATATAGAATCTCTACTATCTAGAGAGGTTAAATGTAAAGTGAAGAATGATTTTCAGTTATAGATGAGGCCATTTATCAGAAGACTAAGGAAGTAGAGTGAACATTTGTATGATTTTAAAACATGCTATGGCTTCTTTTCAAAGGTCGTATTATAAATAATACAAGTAACTTCATGGTGTCCTTCATTATGCTCTTTCATATTCTGAAACAAATTGATACTTTATTTAAAAATAGTAGTTTTCTCTCAGGGGTATATGAGGTCAAAACCAAAAGTTGTTATGTTAATATGTAAGTCATCCATCTTTACTATCTTCAAATAAATCAATGAGTATTTCTAAACCTCTTTCTTTTTTCTAATTGGTAAACATTGATTGCTGAAATACACATAAACAAAAACTCTTCCATATCCATAATAAAAAGCAAGAGTGTAGAGGAGCCTGAATACCACAATTATTGAGAACCAATCACTTAGGACAAGACTAATCTTTTTCCTTGCTACATTTATTTAAAAAAAACAAAATTCATGTACAGTTATGTTTCTCTGACACTACTGCTCATTCTCAATATCTCAAGAGTTCATAAGGCTTAATCAACATAACGAACTTTATTTCACAGAGATACTGGTGGGACAAGGTAATTGAGAATTTTCTCTCTTATTCAAACGTTTTAGCAAATTAGCAAAGTTCATAAACCTACATGAGACAGCCCTGCACATCCCTTTTACACCTTCTTAAAGTGATAAAACAAATGTATTTATTAAGAAGACCCAAAAATATAAAAGTATAGCCTCTCTGTAGTGTATAAAAGTAAGAATCATATGCAACTAAATATAATTTATGCTTATTAATCAATATTTCAGTGTTGTCTTTCACTTAAAATTTATTTAGGTATCAATGATGACCATTATGTAACTAAACTCAATATCAAACATAAGATTTTTAACTTACTTAAAGATCTTGGAAATTATTTCCAACTGATAAATTTCAAAAAATATTTTTGAAAAACAATTTTGTCAGAACAATGATTCAATTGCATTGAACAGAAAATTATATGTTTTTAATTTTCTTAAAAAACATGTAGGAGAAATGATAGTTTATTTGATTAGTAGACCCATATGTACTAGTCAGCTTGCACTCCCATAACAAAATACTATGGTCTGTTTGGGTTAAGCAAGATAAATTAATTTTTACAGAGTTCTGGAGGCTGGGAAGTCTAAGTTCCAGGTGATTACTGTTTCAGCTTCTAGTGAGTACTCGCTTCCTGGGTTCCAGAAGACCACCTTTCTGAGGTGTGTTTACCTGGCCTTTCCTCAATATGTATCTTCAGAAAATGGGAAAGAGAGATTCATCTTAGGTATCACACTTTCAATAAAGACATTAATCCCATCTTGAGGGTCCCACCTTCTAGACCTCATTTAACCCTAATTATCTTCCAAAGACTCCATCTCCAAATGCAGTCACATTGGAGGTTAGGGTTCCAACATATGAATTTCGGGAAGACACATACATTCAGCCTTAAGGTGTTATAGGTTAATACGAAAAATCAAAATGAAATATAAATTTAACACATGCCAAAATCTATGCAACTAATTAATTAATGAGGGAATCAGTCAGATATTACTAGTTCAAAAAAGTCAAAGCACCACATGTTATAAGCCTATAATGAGTTTTGAAATTAATCTATAAAATATATAAAACTGGCTTCTTCCACAACAGGGTTGGGGTGAAAGGAAGGGAAATTTGGAAAGGTGTACCCTGGACACTCAGTTTTTTTTGTTTGTTTGTTTTATTTATCATCATTTTAAAATCTATTACAATTACTCCTGACAGAGAAAAGAGCCAAAATATCATTTACAATTCAAATACAATTTTTAATGAAATCTAAAACGATGATAGAAATTATGCTTTTAGAAGTAAGCATATTAACTCTTCATAATAGGGTGAAGTGACTGGAAGTCTGAGGGCCCCTCTGAAGTGTTAACAATATTTTACTTCCTGATTTAGGTATAAATTATATGGGTATATTAAGTTTATACAAATTCGTTAATGTGTATTTTTCAATATGTACATATTCAATAAAATATTTTTAAAAATTATTTGCTAAATTATATGCTATTTACAATAAACTCACTCTAAATATAAAGACTCAAATAGATTAAAAGTAAGAAGATGGATTGCTGGGCACAGTGGCTCACACCTGTATCCCAGCACTTGGGAGGCTGAGGTGGGAGGATTGCTTGACTTCAGGAGTTCAAGGCCATCCTGGGTAACATAGTGAGACCCCATCTCATTAAAAAAATAAAGAGAGAGAGAGATGGAGAAAGATATACCTGGCTAACACTAATCAGGGGTAAGATAAAGTACTTCTATTAACTTCAGACAAAGCATATTTTAGAGCCAGGAAAATTATCAGTTGGTAAAGAAAATGGAGTGAGACCAGAGAAGTCTCAGTAGAAGCTGTAGCATATTATGTCAGTGTCAAATTATATTTTAACCGGAGAAAACCATGGTTACCTGAGCAAAATTAATCAGTCAAGTGGAGAACAGCAATTTTAGAGATATGGAAAGCAAATGGGAAAATAATTATTAATGAGACAATAACAATAATAATAGTCATGGCTCCCTTCTTTTGTGTTTGCCTATGCTAAAGATTTTGGTTTATTAAAAGCTGTTCTCAAAACTGACTCTGGTCTTGTATCTTCCACTGCTTTGTCATCCACTCTCCAAATATTGACTAATTCTGACAGCCTCTCTCAGGAGCTTGTTAAGCTAATTTTATTAGCAGTAAGTTCATGTCTTGCAGCCTAATATCTGTGTTTTATTTCAAGGAAGCCTCTTTTCTGCATAGCATTCTCTATATTTTCTTCTTTACCTCAATCTTTTAATGATTCCCTAATTGATGTTTTCTATATACATTCTCAGATTGTTACTCACTTGTACTAACTTTTTGAGGATTTTTCTGAACCTTGGATTCACTTCTACATAGACAGCCATTAGCCTCAAGGCTGTATGTAAGTTTGCTCCCATGTTTAGTTATCTGGCCTTGATGTCATCTCTACGTCTAATCTTAGAATTCCTTTGGCTCAGGTTCAGTTGTAACAACATGCTAAGCTGCAGGAAAAGTTAGGTTCTAATTGAGGAATATCTTCATTTATCCAGATTCACTCTGGTATTCTGCTTCCATGACCAATAATCCATCCAAAAATTATATCAGAGACTTAAGTGTGAAGTCTCAGTTTAAGATAAACACTTTCATCATTTTATACTCATATGTCCACAATTCTACTGTTAAATGTATACAATGAAATAACACTGGAAATAACTTTAGAACTTTGAATTTCTCAGATCTAATTTTTCTATAGACCTTGATAATAACTGCTGAATCACTCACCTGAAATTACATCTGCGGTCCTAAGATTATTAGCTTTAGTAGAATTTAGTCTTTCTGTCTTTATTTTAACATTATGAGTACCTCCTATAATAGTCTTTATACAGAACTTTATAATTTATAACCCCTAGGAATTAGGAAGGGCATATATTAGTTTTATCAGTCATATTTTTGTTTTTGTAGATTAACCATGGCTTAAAAAATGGCTCGCAATATCATGAAACTTAATGTTACAGACAGAAGCTTAATTCAGATCTTCAGATACTGTTTTCTATTGATTAGTGATTAATATAACAATCTCCTAAAACACACTTTGTATTATTCCATTTTCATGCTGCCGATAAAGACATACCTGAATCTGGGCAATTTATAAAATAAAAAGATTTAATTGACTTACAGTCCCAAGTGGTTGGAGAGGCCTCAGAATAATGGCTGAAGGTGAAAGGCACATCTCACATGGCGGCAGAAAAGTGAAGAAAACTTGTGCAGAGAAACCCCCTTTTTTAAACCATCAGATCTAGTGAGACGTATCTGCTATCATGAGAACAGAATGGGAGAGACCTGCTCCCATGATTCAGTTACCTCCCACCAGGTCCCTCCCACAACACATGAGAATTCAAGATGAGATTTGGGTGGAGACACAACAAAACCATATTATTCCACTGCTGGCCCCTCTGAAATCTCATGTCTTCACATTTCAAAACCAATCATACCTTCCCAACAGTCCCCCAAAGTCTTAACTCATTTCAGTATTAACTCAAAAGTCCACAACCCGAAGTCTCATCCAAGACAAGGCAAGCCCCTTCTGCCTATGGGCCTGTAAAATCTAAAGCAAGTTACTTATTTCCTAGATACAGTGGGGGTATAGGCATTGGGTAAATACAGCCATTACAAATGGGAGAAATTGGCCAAAACAAAGGGGCTGCAGGCCCCATGCAAGTCTGAAATCCAGCAGGGCAGTCAAATCTTAAAGCAACAAAATGATCTCCTTTGACCCCATGCCTCATATCCAGGTCATGCTGATGCCAGAGGTGGATTCCTTTGGTCTTGGGCAGCTCTGCCCCTGTGGCTTTGTGGGTACAGCCTCCCTCCTGGCTGCTTTCATGGGCTAATGTTGAGTGTCTGTGGCTTTTCTTAGATGCACGGTGCAAGCTGTCAGTGGGTCTCTCATTCTGGGGTATGGAGGACAGTGGCCCTCTTCTCACAGCTCCACTAGGCAGTGCCCCAGTAGAGACTCTGTGTGGGGGCTCCCATCCCACATTTCCCTTCTGTATGCCCTAGCAGAGGTTCTCCTTGAGGACCCCAGCCCTACAGCAAATTTCTGCTTGGGCATCCAGACATTTCCATACATCTCCTGAAATCCAGGTGGAGGTACCCAAACCCCAATTCTTGACTTCTGTGCACTTACAGGCTCAACATCATGTGGAAGCTGCCAAGGCTTGAGGCTTGCACCCTCTGAAGCTACGGCCCCGGCACGACTTTGGCCCCTTTCAGCCATGGCTGGAGTGCCTGGGACACAAGACACGAAGTCGCTAGGCTGCACACAGAACAGGAACCCTAGTCTTGGCATATGAAACCACTTTTTTCTCCTAGATCCCTGGAATTGTGATGGGAGGGGCTGCCTCCAAGGTCTCTGACATGCCCTTGAGACATTTTCCCCATTGTCTTGGTGATTAACATTAGGCTTCTCATTACTTATGCAAATTTCTGCAGCCAGCTTGAATTTCTTCTCAGAAAATGGGATTTTCTTTTTTATTGCAGTGTTAGGCCATAAATTTTCCAAACTTTTATGCTCTGCTTCACTTATAAAACTAAATGCCTTTTTGAATTTTTGGTAAAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCTGTCTTGGTCTCCCAAAGTACTGGGATTACAGGCGTGAGCCACCGTGCCCA	G	20	PASS	ClusterIDs=HG3_10X_allpass_3661:HG2_10X_allpass_675:HG3_Ill_Krunchall_6042:HG2_Ill_tnscope_463:HG3_Ill_MetaSV_3689:HG2_Ill_MetaSV_3527:HG3_PB_pbsv_4270:HG3_PB_SVrefine2Falcon1Dovetail_2737:HG2_PB_pbsv_4386:HG2_PB_SVrefine2PBcRplusDovetail_8048:HG2_PB_SVrefine2Falcon2Bionano_2106:HG2_10X_SVrefine210Xhap12_3229;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3229:HG2_PB_SVrefine2Falcon2Bionano_2106:HG2_PB_SVrefine2PBcRplusDovetail_8048:HG2_PB_pbsv_4386:HG3_PB_SVrefine2Falcon1Dovetail_2737:HG3_PB_pbsv_4270;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00165217;ClusterMaxSizeDiff=0.00165217;ClusterMaxEditDist=0.00165217;PBcalls=5;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-49058;DistBack=6135;DistForward=-30075;DistMin=-30075;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=73;REFWIDENED=4:34779882-34829012;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9999;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=2758.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:71:68:0|1:58:4:3:29:./.:0:0:0:0:0/1:51:21:0/1:383:225:49198:.:.
chr4	34904112	HG2_Ill_manta_1216	GTATATATATATATTTGCTATATATATATATTTGCTATATATATATATTTGC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_5619:HG3_PB_HySA_6746:HG2_PB_assemblyticsPBcR_18635:HG2_PB_assemblyticsfalcon_19277:HG4_PB_assemblyticsfalcon_18863:HG2_PB_pbsv_4387:HG4_Ill_GATKHC_7356:HG4_PB_HySA_6562:HG4_Ill_GATKHCSBGrefine_3060:HG4_Ill_250bpfermikitraw_6123:HG4_Ill_150bpfermikitraw_5835:HG3_PB_pbsv_4271:HG3_PB_assemblyticsfalcon_19196:HG3_Ill_manta_986:HG3_Ill_Krunchall_6044:HG3_Ill_GATKHCSBGrefine_2922:HG3_Ill_250bpfermikitraw_5867:HG2_PB_HySA_8269:HG2_Ill_manta_1216:HG2_Ill_SpiralSDKrefine_12133:HG2_Ill_Krunchall_6168:HG2_Ill_GATKHCSBGrefine_2920:HG2_Ill_250bpfermikitraw_6057;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5619:HG4_Ill_GATKHC_7356:HG4_Ill_GATKHCSBGrefine_3060:HG4_Ill_250bpfermikitraw_6123:HG4_Ill_150bpfermikitraw_5835:HG3_PB_pbsv_4271:HG3_PB_assemblyticsfalcon_19196:HG3_Ill_manta_986:HG3_Ill_Krunchall_6044:HG3_Ill_GATKHCSBGrefine_2922:HG3_Ill_250bpfermikitraw_5867:HG2_PB_HySA_8269:HG2_Ill_manta_1216:HG2_Ill_SpiralSDKrefine_12133:HG2_Ill_Krunchall_6168:HG2_Ill_GATKHCSBGrefine_2920:HG2_Ill_250bpfermikitraw_6057;NumExactMatchSVs=17;ClusterMaxShiftDist=0.226804;ClusterMaxSizeDiff=0.226804;ClusterMaxEditDist=0.247423;PBcalls=9;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=-35;DistForward=24920;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=70;REFWIDENED=4:34904104-34904224;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2759.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:63:1/1:3:22:3:23:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr4	35240256	HG2_PB_SVrefine2PBcRplusDovetail_8050	ATAAAATGTCACTGGAACAATCTTATTTCCCACCAGCTAACACACTAATTTTTTGTTCTTCACAGAAATGTCATAAAGTCAAATGAGTTTGTCATTATTAGCTTTCTCATCTTTTTCCACTAAATCATCTCTATAATCCATTGCAATTAGAGTAGGTCCCCTTCTTTCAAGTTATAAAAACACTTCTTTTGGGGTTACTTCATCCAATAATGGTAAAATGTTCATTTCACTCAGTCTTTCAGAAGCATTATTGGAATTCTGTCTTCCCTTGGTTTCTGGATTATCATATTTTCTTGGCTTTCCTCCCACTGCTGCTTTCTCTTTCAGATGCTATTCTTTATTGCTTTCTCTTTCCCCAGAGACCTATAAATTATTGGTGTGCCCTAGGACATAAACCTCAGATTTTTTTTTTCTTTTTATATCCTCTATCTAAATCAGTAGTTTTCCAACCAGGGTTACATAATTGTACAACTCAAAGAGCTTTAAAAATAGAAATAACTGACCCAATCCCCATGTATTCTAATTTAGTTGTTCTGGTAGAACTTGGATATAAATATCCTTTAAAATTATTCAAGTGAATCTAATGGAGAGTCAGTGCCAAAAACTTAACTTAGTAACACCTAGTTCCTTTGTTTTAATTTAGTCTGATGACTCAAATTGATCTTTGATTCAGCAAAAATATGTATTTTGATCTCCAGATTCATATGCAAAATTACCTATGAGGCTTCTCTAAGTGAATTCCAGATATGCAGATCAAAATTATGTCCATCTCTATTCTCCACTTACTCCACTCTAAATATTTCCTATCTGAGTTAAGACACCATTGTTCAGATGCATCCTCAATACCTCTAGATCTTTCATCCATACATGTTTAATTATCCAATAAGAACAGAGTACACTGCTTTTAAAACATACTCTGAATACCAGTCATTCTTATTTTTGACACTTCTATTGACCTGCCACTGTCAACTTTCACCTGCATCATTACAGAAGCTTCTCAACTGGTGTCCTCATTGCCACTCTTGCTCTTTAGCCTATTTTAATTATTTTTCTTAAGATTTGTTAATTTTAATATCTTTAAGCATATATTTTGTATGACTTTTTAAATAAATTAATAAAATTTTCATGTAAAACAAATTGCACCCATTTTATTTTCAAATTTTAAAACCTACAAAAGGTTTATAATTTAAGGCATTTCCTCTGACTGTTTTTTGTCTTTCATGTGACTGACATTTTGAAGAGTTCCATACACTACTGATAGTGAACAAGGCACTCATTTAACATCTCAGAATTTATGAAAGTAAAAAAGGAAAAGAAAAACAGTAAATGCCATAAGCCCTTTAACTAGATCATCAATTTGCTCATTTCCATCATCTCCTTCTTTCTGTGTATGTGTATTCATATACGTATATGGGGTATTTTTAAAATTTTATGTAAAAATATGGCAGACATCAATACATTTTACCCTTAAACATTTCAGTGAGTGTGTGTTTCCTAAGAAGGATGCATCCCTACTGCTCCACACCACCAATATTATATTTAAGAAGTTCAACATGGATAAAATATTAGGAAGCATGAGACCCACATTTGCCCAATCTCTCCATTAAATTCATCAATCTGTCTATCTGACAATCCATAAATAGTTGAAACCCTGGACCTAAATAAGAACAATGAATTGAGATATATCTCTAGCCTCTTATTATTTAGGGCATTCCCTCTGACTGTTTGTCTTTCACATCACCGACATTTTGAAGGATTTCATATACCACTGATAGTGACCAAGGCACTCATTTCACTTATCATAATTTACAGTTCTGGGCGCATAGATTACCATGGATAATATTATAGATACAATAGATTAGCATAGATACCATAGATTACCATAGTGGTTGATACAGCTTGACTGAGTTACCCCCCAAATCTCATATTGAATCTTAACTCCCATAATTCCCATGTGTTGTGGGAGGAACCCAGTGGGAGATAATTGAATCATGGGGGTAGTTTCCCCCATGCTGTTTTCATGGTGGTAAATAAGTATCACGAGATCTCATGGTTTTATAAGTGGTTTCCCCCTTCACTTGGCTTTCACTCTCTCTTGCTTGCTGCCGTGTAGGATGTGCCTTTCAGCTTCTGCCATGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCAAGAAATCTCTTTTTCTTTATAAATTACTCAGTCTCAGGTATGTCTTTATCAGCAGCATGAAAATGTACTAATACAGTAAATTGATACTGGTAGTGTGGGTGCTACTGTAAAGATACCTGAAAATGTGGAAGAGACTTTGGAACTGGGTAACAGGCAGAGATTGGAACAGTTTGGAGGGCTCAGAAGAAGACAGGAAGATGTGGGAAAGTTTGGAACTTCCTAGAGACTTGTTGAATGGCTTTGACCAAAATGTTGATAGTGTTATGGACAATAAAGTCCAGATTGAGGTGGTCTCAGATAGAGATGAGGAACTTGTTCGGAACTGAAGCAAGGTGACTCTTGTTAAGTTTTAGCAAAGAGACTGGCAGCATTTTGCCTTTGCCCTAGAGATTTGTGGAATTTTGAACTTGAGAGAGATTAATTAGGGCATCTGGCAGAAGAAACTTCTAAGCTCAAATCATTCAAGAATTGACTTGGGTGCTGTTAAAAGCATTCAGTCTTATTCCTTCACAAATATAAGGTTTGGAATTGGAAATTATGTTTAAAAGGGGAAACAGAGCATAAGAGTTTGGAAATTTGCAGCCTGATGATGAAATAGAAAAGAAAAACCCATTTTCTGAGGAGAAATTCAAGTGGCTTCAGAAATTTGCATTAGTAATGAGGAGCAAAATATTAACCTCCAAAACAATGGGGAAAATATCTCCAGGGCATGTCAGAGAACTTTGAGGCTGCCCCTCTCATCACTGATGCACAGGCATAGGAGAAAACAGTGGTTTCATGGGCATGGCCCAGGGGCTCCCTGCTGTATGCAGCCTAGGAACTTGGTGCCCTGTGTCCTAGCTGCTCCAGCTGTGACTAAAAGGGACCAAGATATAGCTCAGCTGTTTCACGGGCATGGCCCAGCGCCCCCCTGCTGTATGCAGCCTAGGAACTTGGTGCCCTGTGTCCTAGCCACTCCAGCTGTGACTAAAAGGGACCAAGATACAGTTCAGGCTGTGGCTTCAGTGGGTGCAAGCCCAAAGCCTTTGAGGCCTCCATGTGGTGTTGGGCCTGTGGGTGCACGGAAGTCAATAATTGAGGTTTGGGAACCTCTGCTTAGATTTCAGAGGATGTATGGAAACGCCTGGATGTCAAGGTGGAAGTCTGCTGCTGGGGCAGAGCCCTCATAGCGAGCCTGTACAAGGTATGTGCAGAAGGGAAATGTGGGATCACATCCCCCACATGGAGTCTCCACTGGGACAATCCTAATGGAGCTGTGAGAAGAGGGCCACCACCCTCCAGACCCCAGAATAGTAGATCCACTGACAGCTTGCACCATGTACCTGGAAAAGCCACAGACACTCAATGCCAGCCCATGAAAGCAGTCATGAGGGGGACTGTAACCTGAAAAGCCACAAGGATGAAGCTACCCAAGACCATGGGAACCCTCCTTTTGCATCAGCATGACCTGGATGCGAGACATGCAGCCAAAGGAAATCATTTTAGAGCCTTAAGATTTGACCACCCCTCTGGATTTCAGACTTGCATGGGGCCTTTAGCCCCTTATTTCAGTCAATTTCTCCCATTTGGAATGGGTGTATTTATCTAATGCCTGTAATCCCATTATATTTAGGAAGTAACTAACTTGCTTTTGATTTAAAGCCTCATGGGTGGGAGGGATTTGTCTTGTCTCAGATGAGAGTTTGGACTGTGGACTTTTCAGTTCAATGCTGAAATGAGTTAAGACTCTGGGAGACTGATGGGAAGGCGTGATTGGTTTTGAAATGTGAGGACACAAAGTTTGGGAGAGCCAGGGCAGAATTATATGGTTTGGCTGTGTCCCCACCCAAATCTCATTTTGAATTGTAGCTCCCATAATTCTCATGTGTTGTGAGAGGGAACAAGTGAGGGATAACTGAATCATAGGGGTGGTTTCCTCCATACTGTTCTCGTGGTAGTGAATAAATTTCATGATATCTCAGGGCTTTATAAAGGGTTTCTCTTTTCTTGACTCTCACTCTCTCT	CATGTATGCA	20	PASS	ClusterIDs=HG2_Ill_Krunchall_6176:HG2_PB_PB10Xdip_22178:HG4_PB_pbsv_4424:HG2_PB_pbsv_4392:HG2_Ill_tnscope_464:HG2_Ill_SpiralSDKrefine_12136:HG4_PB_SVrefine2Falcon1Dovetail_2690:HG3_PB_assemblyticsfalcon_19201:HG3_PB_SVrefine2Falcon1Dovetail_2738:HG4_PB_SVrefine2PBcRDovetail_2241:HG4_Ill_SVrefine2DISCOVARDovetail_3337:HG2_PB_assemblyticsPBcR_18640:HG2_PB_SVrefine2PBcRplusDovetail_8050:HG2_PB_SVrefine2PB10Xhap12_3222:HG2_PB_SVrefine2Falcon1plusDovetail_8670:HG2_10X_SVrefine210Xhap12_3232:HG4_10X_allpass_795:HG2_Ill_MetaSV_3528:HG2_10X_allpass_677:HG2_PB_assemblyticsfalcon_19282:HG4_PB_assemblyticsfalcon_18869:HG4_Ill_MetaSV_3692:HG4_Ill_Krunchall_6378;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3232:HG2_PB_SVrefine2Falcon1plusDovetail_8670:HG2_PB_SVrefine2PB10Xhap12_3222:HG2_PB_SVrefine2PBcRplusDovetail_8050:HG2_PB_assemblyticsPBcR_18640:HG4_Ill_SVrefine2DISCOVARDovetail_3337:HG4_PB_SVrefine2PBcRDovetail_2241;NumExactMatchSVs=7;ClusterMaxShiftDist=0.133061;ClusterMaxSizeDiff=0.133061;ClusterMaxEditDist=0.133061;PBcalls=13;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-4171;DistBack=-510;DistForward=-3663;DistMin=-3663;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:35240256-35244436;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9998;PctRecOverlap=0.9976;SizeDiff=1;StartDistance=-10;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2760.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:72:40:./.:26:10:24:6:./.:0:0:0:0:0/1:46:19:0/1:301:167:3721:.:.
chr4	35907724	HG3_PB_pbsv_4275	ATTACCCTTTTACATGTTTATATTGATTATTTTGGTAAACCTTCCAATAAATATAAAACAATGTTTAATAATAATCTCTGAGAAACT	A	20	PASS	ClusterIDs=HG2_10X_allpass_678:HG3_Ill_GATKHC_7287:HG3_Ill_GATKHCSBGrefine_2928:HG2_Ill_GATKHC_7280:HG2_Ill_GATKHCSBGrefine_2929:HG2_Ill_breakscan11_601:HG2_Ill_SpiralSDKrefine_12142:HG3_Ill_manta_987:HG2_PB_PB10Xdip_22182:HG2_PB_PB10Xdip_22181:HG2_Ill_manta_1219:HG3_Ill_Spiral_4766:HG2_Ill_Spiral_304:HG2_PB_assemblyticsfalcon_19289:HG3_PB_pbsv_4275:HG3_Ill_svaba_5686:HG3_Ill_scalpel_4378:HG3_Ill_Krunchall_6055:HG3_Ill_250bpfermikitraw_5876:HG3_Ill_150bpfermikitraw_5691:HG3_10X_allpass_836:HG2_PB_pbsv_4395:HG2_Ill_svaba_5594:HG2_Ill_Krunchall_6186:HG2_Ill_250bpfermikitraw_6073:HG2_Ill_150bpfermikitraw_5633;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_678:HG3_PB_pbsv_4275:HG3_Ill_svaba_5686:HG3_Ill_scalpel_4378:HG3_Ill_Krunchall_6055:HG3_Ill_250bpfermikitraw_5876:HG3_Ill_150bpfermikitraw_5691:HG3_10X_allpass_836:HG2_PB_pbsv_4395:HG2_Ill_svaba_5594:HG2_Ill_Krunchall_6186:HG2_Ill_250bpfermikitraw_6073:HG2_Ill_150bpfermikitraw_5633;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0584795;ClusterMaxSizeDiff=0.0584795;ClusterMaxEditDist=0.0584795;PBcalls=5;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-86;DistBack=11067;DistForward=16918;DistMin=11067;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:35907723-35907812;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9884;PctRecOverlap=0.9655;SizeDiff=1;StartDistance=-3;EndDistance=-2;GTMatch=0;TruScore=97;MatchId=2761.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:37:0|1:52:3:0:33:./.:0:0:0:0:0/1:47:23:./.:.:.:.:.:.
chr4	36469904	HG4_Ill_SVrefine2DISCOVARDovetail_3344	TAGAAAATATAACGGGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_602:HG3_Ill_Krunchall_6058:HG2_Ill_Krunchall_6189:HG2_PB_assemblyticsPBcR_18647:HG2_PB_assemblyticsfalcon_19293:HG3_PB_HySA_6756:HG2_PB_pbsv_4397:HG2_PB_SVrefine2PB10Xhap12_3224:HG4_PB_pbsv_4426:HG3_Ill_MetaSV_3690:HG2_Ill_tnscope_465:HG4_Ill_manta_1075:HG4_Ill_SVrefine2DISCOVARDovetail_3344:HG4_Ill_MetaSV_3694:HG4_Ill_GATKHCSBGrefine_3067:HG4_10X_allpass_796:HG3_PB_pbsv_4277:HG3_PB_assemblyticsfalcon_19210:HG3_PB_SVrefine2Falcon1Dovetail_2739:HG3_Ill_scalpel_4381:HG3_Ill_manta_988:HG3_Ill_SVrefine2DISCOVARDovetail_3358:HG3_Ill_GATKHCSBGrefine_2929:HG3_10X_allpass_837:HG2_PB_SVrefine2PBcRplusDovetail_8051:HG2_PB_SVrefine2PB10Xhap12_3223:HG2_PB_SVrefine2Falcon1plusDovetail_8672:HG2_Ill_manta_1220:HG2_Ill_SVrefine2DISCOVARplusDovetail_9368:HG2_Ill_MetaSV_3529:HG2_Ill_GATKHCSBGrefine_2931:HG2_10X_allpass_679:HG2_10X_SVrefine210Xhap12_3234;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3234:HG2_10X_allpass_679:HG2_Ill_GATKHCSBGrefine_2931:HG2_Ill_MetaSV_3529:HG2_Ill_SVrefine2DISCOVARplusDovetail_9368:HG2_Ill_manta_1220:HG2_PB_SVrefine2Falcon1plusDovetail_8672:HG2_PB_SVrefine2PB10Xhap12_3223:HG2_PB_SVrefine2PBcRplusDovetail_8051:HG3_10X_allpass_837:HG3_Ill_GATKHCSBGrefine_2929:HG3_Ill_SVrefine2DISCOVARDovetail_3358:HG3_Ill_manta_988:HG3_Ill_scalpel_4381:HG3_PB_SVrefine2Falcon1Dovetail_2739:HG3_PB_assemblyticsfalcon_19210:HG3_PB_pbsv_4277:HG4_10X_allpass_796:HG4_Ill_GATKHCSBGrefine_3067:HG4_Ill_MetaSV_3694:HG4_Ill_SVrefine2DISCOVARDovetail_3344:HG4_Ill_manta_1075;NumExactMatchSVs=22;ClusterMaxShiftDist=0.113671;ClusterMaxSizeDiff=0.113671;ClusterMaxEditDist=0.113671;PBcalls=12;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=9503;DistForward=16273;DistMin=9503;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=4:36469905-36470256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2762.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:42:0|1:21:2:0:36:./.:0:0:0:0:0/1:32:24:0/1:17:6:.:.:.
chr4	36715741	HG2_PB_SVrefine2Falcon2Bionano_2108	AATATATATATATATATATATATATATATATATATATATATATATATCTCCTGTATGGAGGATATATATATATATATATATATATATATATATATATATCTCCTGTATGGAGG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_4278:HG2_PB_SVrefine2PB10Xhap12_3226:HG2_PB_SVrefine2PBcRplusDovetail_8052:HG2_PB_SVrefine2PB10Xhap12_3225:HG2_PB_pbsv_4398:HG3_Ill_SVrefine2DISCOVARDovetail_3359:HG2_PB_SVrefine2Falcon2Bionano_2108:HG2_Ill_scalpel_4299:HG2_Ill_SVrefine2DISCOVARplusDovetail_9370;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9370:HG2_Ill_scalpel_4299:HG2_PB_SVrefine2Falcon2Bionano_2108:HG3_Ill_SVrefine2DISCOVARDovetail_3359;NumExactMatchSVs=4;ClusterMaxShiftDist=0.036036;ClusterMaxSizeDiff=0.036036;ClusterMaxEditDist=0.0639269;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-112;DistBack=-333;DistForward=-99;DistMin=-333;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=4:36715740-36715884;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2763.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:35:0|1:28:1:1:31:./.:0:0:0:0:0/1:9:4:./.:.:.:.:.:.
chr4	36780614	HG4_PB_SVrefine2Falcon1Dovetail_2691	ATCTTTTGTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGCGTAGCTGGGACTACAGACGCCCGCCACCACGCCCGGCTAATTTTTTTGTGTTTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3236:HG2_PB_PB10Xdip_22204:HG2_PB_PB10Xdip_22203:HG3_Ill_Krunchall_6062:HG2_Ill_Krunchall_6194:HG4_PB_assemblyticsfalcon_18878:HG2_PB_assemblyticsfalcon_19296:HG2_PB_assemblyticsPBcR_18651:HG2_PB_pbsv_4399:HG2_Ill_tnscope_466:HG2_Ill_MetaSV_3530:HG4_PB_SVrefine2Falcon1Dovetail_2691:HG3_PB_pbsv_4279:HG3_PB_assemblyticsfalcon_19215:HG3_Ill_scalpel_4386:HG3_Ill_manta_989:HG3_Ill_SVrefine2DISCOVARDovetail_3360:HG3_Ill_GATKHCSBGrefine_2930:HG2_PB_SVrefine2PBcRplusDovetail_8053:HG2_PB_SVrefine2PB10Xhap12_3227:HG2_PB_SVrefine2Falcon2Bionano_2109:HG2_PB_SVrefine2Falcon1plusDovetail_8673:HG2_Ill_scalpel_4302:HG2_Ill_manta_1221:HG2_Ill_SVrefine2DISCOVARplusDovetail_9371:HG2_Ill_GATKHCSBGrefine_2933:HG2_10X_allpass_680;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3236:HG2_PB_PB10Xdip_22203:HG4_PB_SVrefine2Falcon1Dovetail_2691:HG3_PB_pbsv_4279:HG3_PB_assemblyticsfalcon_19215:HG3_Ill_scalpel_4386:HG3_Ill_manta_989:HG3_Ill_SVrefine2DISCOVARDovetail_3360:HG3_Ill_GATKHCSBGrefine_2930:HG2_PB_SVrefine2PBcRplusDovetail_8053:HG2_PB_SVrefine2PB10Xhap12_3227:HG2_PB_SVrefine2Falcon2Bionano_2109:HG2_PB_SVrefine2Falcon1plusDovetail_8673:HG2_Ill_scalpel_4302:HG2_Ill_manta_1221:HG2_Ill_SVrefine2DISCOVARplusDovetail_9371:HG2_Ill_GATKHCSBGrefine_2933:HG2_10X_allpass_680;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0849057;ClusterMaxSizeDiff=0.0849057;ClusterMaxEditDist=0.0849057;PBcalls=13;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-396;DistForward=-284;DistMin=-396;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:36780615-36780951;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2764.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:31:0|1:34:2:3:28:./.:0:0:0:0:0/1:34:22:0/1:22:6:.:.:.
chr4	36842746	HG2_PB_SVrefine2Falcon1plusDovetail_8674	TTGGATGAATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3531:HG4_10X_allpass_797:HG3_PB_HySA_6761:HG2_PB_HySA_8289:HG4_Ill_Krunchall_6391:HG3_Ill_Krunchall_6064:HG2_Ill_Krunchall_6196:HG3_PB_assemblyticsfalcon_19216:HG4_PB_assemblyticsfalcon_18880:HG2_PB_assemblyticsfalcon_19298:HG2_PB_assemblyticsPBcR_18653:HG3_PB_pbsv_4280:HG4_PB_HySA_6580:HG2_PB_HySA_8288:HG4_PB_pbsv_4428:HG4_PB_SVrefine2PBcRDovetail_2243:HG4_PB_SVrefine2Falcon1Dovetail_2692:HG4_Ill_manta_1076:HG4_Ill_SVrefine2DISCOVARDovetail_3346:HG4_Ill_GATKHCSBGrefine_3070:HG3_Ill_scalpel_4388:HG3_Ill_manta_990:HG3_Ill_SVrefine2DISCOVARDovetail_3361:HG3_Ill_GATKHCSBGrefine_2931:HG3_10X_allpass_838:HG2_PB_pbsv_4400:HG2_PB_SVrefine2PBcRplusDovetail_8054:HG2_PB_SVrefine2PB10Xhap12_3228:HG2_PB_SVrefine2Falcon2Bionano_2110:HG2_PB_SVrefine2Falcon1plusDovetail_8674:HG2_Ill_scalpel_4304:HG2_Ill_manta_1222:HG2_Ill_breakscan11_603:HG2_Ill_SVrefine2DISCOVARplusDovetail_9373:HG2_Ill_GATKHCSBGrefine_2935:HG2_10X_allpass_681:HG2_10X_SVrefine210Xhap12_3237:HG4_Ill_MetaSV_3695:HG3_Ill_Spiral_4773:HG3_Ill_MetaSV_3692:HG2_Ill_tnscope_467;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3237:HG2_10X_allpass_681:HG2_Ill_GATKHCSBGrefine_2935:HG2_Ill_SVrefine2DISCOVARplusDovetail_9373:HG2_Ill_breakscan11_603:HG2_Ill_manta_1222:HG2_Ill_scalpel_4304:HG2_PB_SVrefine2Falcon1plusDovetail_8674:HG2_PB_SVrefine2Falcon2Bionano_2110:HG2_PB_SVrefine2PB10Xhap12_3228:HG2_PB_SVrefine2PBcRplusDovetail_8054:HG2_PB_pbsv_4400:HG3_10X_allpass_838:HG3_Ill_GATKHCSBGrefine_2931:HG3_Ill_SVrefine2DISCOVARDovetail_3361:HG3_Ill_manta_990:HG3_Ill_scalpel_4388:HG4_Ill_GATKHCSBGrefine_3070:HG4_Ill_SVrefine2DISCOVARDovetail_3346:HG4_Ill_manta_1076:HG4_PB_SVrefine2Falcon1Dovetail_2692:HG4_PB_SVrefine2PBcRDovetail_2243:HG4_PB_pbsv_4428;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0801187;ClusterMaxSizeDiff=0.0801187;ClusterMaxEditDist=0.0801187;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-343;DistBack=5992;DistForward=-327;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:36842747-36843103;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2765.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:1/1:1:33:1:33:./.:0:0:0:0:1/1:0:36:./.:2:19:.:.:.
chr4	37125923	HG3_Ill_GATKHCSBGrefine_2933	AGGCATTTCATAGATTGGTATTAAAATAATACTTGACCAGGTGCGGTGGCTCACGCCT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_305:HG2_PB_HySA_8293:HG3_PB_pbsv_4283:HG3_Ill_svaba_5699:HG3_Ill_scalpel_4391:HG3_Ill_manta_991:HG3_Ill_Krunchall_6065:HG3_Ill_GATKHC_7298:HG3_Ill_GATKHCSBGrefine_2933:HG3_Ill_250bpfermikitraw_5886:HG3_Ill_150bpfermikitraw_5700:HG2_PB_pbsv_4402:HG2_PB_assemblyticsPBcR_18658:HG2_Ill_svaba_5607:HG2_Ill_manta_1223:HG2_Ill_SpiralSDKrefine_12152:HG2_Ill_Krunchall_6198:HG2_Ill_GATKHC_7293:HG2_Ill_GATKHCSBGrefine_2937:HG2_Ill_250bpfermikitraw_6083:HG2_Ill_150bpfermikitraw_5642:HG2_10X_allpass_682:HG3_Ill_Spiral_4774;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_682:HG2_Ill_150bpfermikitraw_5642:HG2_Ill_250bpfermikitraw_6083:HG2_Ill_GATKHCSBGrefine_2937:HG2_Ill_GATKHC_7293:HG2_Ill_Krunchall_6198:HG2_Ill_SpiralSDKrefine_12152:HG2_Ill_manta_1223:HG2_Ill_svaba_5607:HG2_PB_assemblyticsPBcR_18658:HG2_PB_pbsv_4402:HG3_Ill_150bpfermikitraw_5700:HG3_Ill_250bpfermikitraw_5886:HG3_Ill_GATKHCSBGrefine_2933:HG3_Ill_GATKHC_7298:HG3_Ill_Krunchall_6065:HG3_Ill_manta_991:HG3_Ill_scalpel_4391:HG3_Ill_svaba_5699:HG3_PB_pbsv_4283;NumExactMatchSVs=20;ClusterMaxShiftDist=0.017094;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.017094;PBcalls=4;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=15395;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:37125922-37125982;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2766.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:./.:11:19:12:12:./.:0:0:0:0:0/1:34:21:./.:.:.:.:.:.
chr4	37483080	HG2_Ill_150bpfermikitraw_5644	TGTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTCCAAGATCAAG	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_18660:HG3_PB_HySA_6769:HG2_PB_HySA_8294:HG3_PB_pbsv_4287:HG3_Ill_svaba_5701:HG3_Ill_scalpel_4394:HG3_Ill_Krunchall_6069:HG3_Ill_GATKHC_7302:HG3_Ill_GATKHCSBGrefine_2935:HG3_Ill_250bpfermikitraw_5889:HG3_Ill_150bpfermikitraw_5704:HG2_PB_pbsv_4404:HG2_Ill_svaba_5609:HG2_Ill_scalpel_4305:HG2_Ill_manta_1224:HG2_Ill_Krunchall_6201:HG2_Ill_GATKHC_7295:HG2_Ill_GATKHCSBGrefine_2938:HG2_Ill_250bpfermikitraw_6085:HG2_Ill_150bpfermikitraw_5644:HG2_10X_allpass_684;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_684:HG2_Ill_150bpfermikitraw_5644:HG2_Ill_250bpfermikitraw_6085:HG2_Ill_GATKHCSBGrefine_2938:HG2_Ill_GATKHC_7295:HG2_Ill_Krunchall_6201:HG2_Ill_manta_1224:HG2_Ill_scalpel_4305:HG2_Ill_svaba_5609:HG2_PB_pbsv_4404:HG3_Ill_150bpfermikitraw_5704:HG3_Ill_250bpfermikitraw_5889:HG3_Ill_GATKHCSBGrefine_2935:HG3_Ill_GATKHC_7302:HG3_Ill_Krunchall_6069:HG3_Ill_scalpel_4394:HG3_Ill_svaba_5701:HG3_PB_pbsv_4287;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0168067;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.0336134;PBcalls=5;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-58;DistBack=76011;DistForward=-53;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:37483081-37483140;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2767.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:47:./.:2:35:21:7:./.:0:0:0:0:0/1:11:31:./.:.:.:.:.:.
chr4	37739598	HG2_Ill_Krunchall_6204	CATATATGTGTATATATATATACACATATATATGTGTATATATATATACACAT	C	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_3364:HG4_PB_pbsv_4434:HG4_PB_HySA_6587:HG2_PB_pbsv_4409:HG3_PB_HySA_6776:HG2_PB_HySA_8300:HG3_Ill_svaba_5709:HG3_Ill_scalpel_4397:HG3_Ill_Krunchall_6075:HG3_Ill_GATKHC_7309:HG3_Ill_GATKHCSBGrefine_2941:HG3_Ill_250bpfermikitraw_5894:HG3_Ill_150bpfermikitraw_5711:HG3_PB_pbsv_4292:HG4_PB_SVrefine2PBcRDovetail_2245:HG4_Ill_svaba_5729:HG4_Ill_scalpel_4212:HG4_Ill_manta_1077:HG4_Ill_SVrefine2DISCOVARDovetail_3350:HG4_Ill_Krunchall_6402:HG4_Ill_GATKHC_7392:HG4_Ill_GATKHCSBGrefine_3072:HG4_Ill_250bpfermikitraw_6151:HG4_Ill_150bpfermikitraw_5864:HG3_Ill_svaba_5708:HG3_Ill_Krunchall_6074:HG3_Ill_GATKHC_7308:HG3_Ill_GATKHCSBGrefine_2940:HG3_Ill_250bpfermikitraw_5893:HG3_Ill_150bpfermikitraw_5710:HG2_PB_SVrefine2PBcRplusDovetail_8057:HG2_PB_SVrefine2PB10Xhap12_3233:HG2_PB_SVrefine2Falcon2Bionano_2114:HG2_PB_SVrefine2Falcon1plusDovetail_8679:HG2_Ill_svaba_5613:HG2_Ill_scalpel_4308:HG2_Ill_manta_1225:HG2_Ill_SVrefine2DISCOVARplusDovetail_9376:HG2_Ill_Krunchall_6204:HG2_Ill_GATKHC_7300:HG2_Ill_GATKHCSBGrefine_2940:HG2_Ill_250bpfermikitraw_6089:HG2_Ill_150bpfermikitraw_5648:HG2_10X_SVrefine210Xhap12_3241:HG4_PB_SVrefine2Falcon1Dovetail_2698;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3241:HG2_Ill_150bpfermikitraw_5648:HG2_Ill_250bpfermikitraw_6089:HG2_Ill_GATKHCSBGrefine_2940:HG2_Ill_GATKHC_7300:HG2_Ill_Krunchall_6204:HG2_Ill_SVrefine2DISCOVARplusDovetail_9376:HG2_Ill_manta_1225:HG2_Ill_scalpel_4308:HG2_Ill_svaba_5613:HG2_PB_SVrefine2Falcon1plusDovetail_8679:HG2_PB_SVrefine2Falcon2Bionano_2114:HG2_PB_SVrefine2PB10Xhap12_3233:HG2_PB_SVrefine2PBcRplusDovetail_8057:HG3_Ill_150bpfermikitraw_5710:HG3_Ill_250bpfermikitraw_5893:HG3_Ill_GATKHCSBGrefine_2940:HG3_Ill_GATKHC_7308:HG3_Ill_Krunchall_6074:HG3_Ill_svaba_5708:HG4_Ill_150bpfermikitraw_5864:HG4_Ill_250bpfermikitraw_6151:HG4_Ill_GATKHCSBGrefine_3072:HG4_Ill_GATKHC_7392:HG4_Ill_Krunchall_6402:HG4_Ill_SVrefine2DISCOVARDovetail_3350:HG4_Ill_manta_1077:HG4_Ill_scalpel_4212:HG4_Ill_svaba_5729:HG4_PB_SVrefine2PBcRDovetail_2245;NumExactMatchSVs=30;ClusterMaxShiftDist=0.038835;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0582524;PBcalls=12;Illcalls=32;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=16;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=3759;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=44;REFWIDENED=4:37739599-37739694;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2768.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:1:6:0:7:./.:0:0:0:0:1/1:0:57:./.:.:.:.:.:.
chr4	38881711	HG3_Ill_150bpfermikitraw_5722	AAATAAAATAAAATAGAGTAGAATAGAATAGAATAGAATAGAATAGAATAGAATAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_4416:HG4_Ill_manta_1080:HG4_Ill_GATKHCSBGrefine_3075:HG4_PB_HySA_6595:HG4_PB_assemblyticsfalcon_18905:HG3_PB_assemblyticsfalcon_19242:HG3_Ill_GATKHC_7320:HG3_Ill_GATKHCSBGrefine_2946:HG2_Ill_GATKHCSBGrefine_2944:HG3_Ill_manta_995:HG2_Ill_SpiralSDKrefine_12163:HG3_Ill_Krunchall_6087:HG4_Ill_svaba_5738:HG4_Ill_Krunchall_6410:HG4_Ill_250bpfermikitraw_6158:HG4_Ill_150bpfermikitraw_5871:HG3_Ill_svaba_5718:HG3_Ill_Krunchall_6086:HG3_Ill_250bpfermikitraw_5903:HG3_Ill_150bpfermikitraw_5722:HG3_10X_allpass_841:HG2_Ill_svaba_5621:HG2_Ill_Krunchall_6212:HG2_Ill_250bpfermikitraw_6099:HG2_Ill_150bpfermikitraw_5657:HG4_PB_pbsv_4442:HG3_PB_pbsv_4301;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5657:HG2_Ill_250bpfermikitraw_6099:HG2_Ill_Krunchall_6212:HG2_Ill_svaba_5621:HG3_10X_allpass_841:HG3_Ill_150bpfermikitraw_5722:HG3_Ill_250bpfermikitraw_5903:HG3_Ill_Krunchall_6086:HG3_Ill_svaba_5718:HG4_Ill_150bpfermikitraw_5871:HG4_Ill_250bpfermikitraw_6158:HG4_Ill_Krunchall_6410:HG4_Ill_svaba_5738;NumExactMatchSVs=13;ClusterMaxShiftDist=0.333333;ClusterMaxSizeDiff=0.333333;ClusterMaxEditDist=0.4;PBcalls=6;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-55;DistBack=21256;DistForward=-27;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=51;REFWIDENED=4:38881693-38881798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:25:0|1:38:3:2:21:./.:0:0:0:0:0/1:45:29:./.:.:.:.:.:.
chr4	39031076	HG2_PB_SVrefine2PBcRplusDovetail_8063	TAAGAACTAATTTTTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_4788:HG4_PB_assemblyticsfalcon_18906:HG3_PB_assemblyticsfalcon_19243:HG2_PB_assemblyticsfalcon_19321:HG2_PB_assemblyticsPBcR_18678:HG4_Ill_Krunchall_6411:HG3_Ill_Krunchall_6089:HG2_Ill_Krunchall_6213:HG2_Ill_Spiral_306:HG3_PB_pbsv_4303:HG4_PB_pbsv_4443:HG4_Ill_MetaSV_3698:HG3_Ill_MetaSV_3698:HG2_PB_HySA_8314:HG2_Ill_tnscope_468:HG2_Ill_MetaSV_3534:HG4_PB_SVrefine2PBcRDovetail_2252:HG4_PB_SVrefine2Falcon1Dovetail_2705:HG4_Ill_svaba_5739:HG4_Ill_scalpel_4216:HG4_Ill_manta_1081:HG4_Ill_SVrefine2DISCOVARDovetail_3356:HG4_Ill_GATKHCSBGrefine_3076:HG4_10X_allpass_799:HG3_PB_SVrefine2PBcRDovetail_2017:HG3_Ill_svaba_5720:HG3_Ill_scalpel_4406:HG3_Ill_manta_996:HG3_Ill_SVrefine2DISCOVARDovetail_3369:HG3_Ill_GATKHCSBGrefine_2948:HG3_10X_allpass_843:HG2_PB_pbsv_4417:HG2_PB_SVrefine2PBcRplusDovetail_8063:HG2_PB_SVrefine2PB10Xhap12_3240:HG2_PB_SVrefine2Falcon2Bionano_2120:HG2_PB_SVrefine2Falcon1plusDovetail_8686:HG2_Ill_svaba_5622:HG2_Ill_scalpel_4315:HG2_Ill_manta_1227:HG2_Ill_SVrefine2DISCOVARplusDovetail_9380:HG2_Ill_GATKHCSBGrefine_2945:HG2_10X_SVrefine210Xhap12_3244:HG2_Ill_breakscan11_605:HG4_Ill_Spiral_354;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3244:HG2_Ill_GATKHCSBGrefine_2945:HG2_Ill_SVrefine2DISCOVARplusDovetail_9380:HG2_Ill_manta_1227:HG2_Ill_scalpel_4315:HG2_Ill_svaba_5622:HG2_PB_SVrefine2Falcon1plusDovetail_8686:HG2_PB_SVrefine2Falcon2Bionano_2120:HG2_PB_SVrefine2PB10Xhap12_3240:HG2_PB_SVrefine2PBcRplusDovetail_8063:HG2_PB_pbsv_4417:HG3_10X_allpass_843:HG3_Ill_GATKHCSBGrefine_2948:HG3_Ill_SVrefine2DISCOVARDovetail_3369:HG3_Ill_manta_996:HG3_Ill_scalpel_4406:HG3_Ill_svaba_5720:HG3_PB_SVrefine2PBcRDovetail_2017:HG4_10X_allpass_799:HG4_Ill_GATKHCSBGrefine_3076:HG4_Ill_SVrefine2DISCOVARDovetail_3356:HG4_Ill_manta_1081:HG4_Ill_scalpel_4216:HG4_Ill_svaba_5739:HG4_PB_SVrefine2Falcon1Dovetail_2705:HG4_PB_SVrefine2PBcRDovetail_2252;NumExactMatchSVs=26;ClusterMaxShiftDist=0.105072;ClusterMaxSizeDiff=0.105072;ClusterMaxEditDist=0.105072;PBcalls=15;Illcalls=26;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-282;DistBack=36707;DistForward=-269;DistMin=-269;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:39031077-39031372;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:80:1/1:1:38:1:34:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr4	40010378	HG2_PB_SVrefine2PB10Xhap12_3244	TTTTTTTTTTTTTGAGACAAAGTCTCGCTCTGTTGGCCAGTCTGGAGTGCAGTGGCACAATCTCAGCTAACTGCAACCACTGCCTCCGAGGCTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAAGCATGTGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGATCTCAAACTCCTGACCGCAGGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCAGCCAACTGCCACACCCTTACTCTTCC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9383:HG2_PB_HySA_8325:HG4_PB_pbsv_4451:HG2_PB_pbsv_4422:HG2_PB_PB10Xdip_22241:HG2_PB_PB10Xdip_22240:HG2_PB_SVrefine2PB10Xhap12_3245:HG4_Ill_scalpel_4222:HG4_Ill_MetaSV_3699:HG4_Ill_GATKHCSBGrefine_3078:HG4_10X_allpass_801:HG3_Ill_MetaSV_3700:HG3_Ill_GATKHCSBGrefine_2950:HG3_PB_HySA_6793:HG3_PB_pbsv_4306:HG4_PB_HySA_6619:HG2_PB_SVrefine2PBcRplusDovetail_8065:HG2_PB_SVrefine2Falcon1plusDovetail_8689:HG4_PB_SVrefine2PBcRDovetail_2255:HG4_PB_SVrefine2Falcon1Dovetail_2708:HG4_Ill_SVrefine2DISCOVARDovetail_3359:HG3_Ill_SVrefine2DISCOVARDovetail_3375:HG2_PB_SVrefine2PB10Xhap12_3244:HG2_PB_SVrefine2Falcon2Bionano_2123;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9383:HG4_PB_SVrefine2PBcRDovetail_2255:HG4_PB_SVrefine2Falcon1Dovetail_2708:HG4_Ill_SVrefine2DISCOVARDovetail_3359:HG3_Ill_SVrefine2DISCOVARDovetail_3375:HG2_PB_SVrefine2PB10Xhap12_3244:HG2_PB_SVrefine2Falcon2Bionano_2123;NumExactMatchSVs=7;ClusterMaxShiftDist=0.126418;ClusterMaxSizeDiff=0.126418;ClusterMaxEditDist=0.233387;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-319;DistBack=11127;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=292;REFWIDENED=4:40010379-40010989;PctSeqSimilarity=0.907;PctSizeSimilarity=0.9906;PctRecOverlap=0.3094;SizeDiff=3;StartDistance=-221;EndDistance=-218;GTMatch=0;TruScore=73;MatchId=2771.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:25:0|1:15:3:0:17:./.:0:0:0:0:0/0:33:0:./.:40:3:.:.:.
chr4	40024907	HG4_Ill_SVrefine2DISCOVARDovetail_3360	AAATAGTGAGGCCGGGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTAGGAGGCCAAGGCAGGAGAATCACTTAAGCCCAGGAGTTTGAGACCAGCCTGGGCAAAGTGGTAAAACCCTGGCTCTACTAAAAATACAAAAATTAGCAGGTCATGGTGGCGTGCACCTATGGTCCCTTGGGAGGCTACTTGGGAGGCTGAGGTGAGAGGATCTCTTGAACCTGGGAGTGGGAGGTTACAGTGAGCTGAGATCATGCCACTGCACTCCAGCCCGGGTAACACAGTGAGACTCCGTCTCAAAATAATAATAATAATGTAAATAAAATATTTAATTTATAATTGCAATTGGTCTATGAAGGAAAAGTAAGGGGGAATATAACTTCTGATTTATATATGATTAGTGAAGGTAATATTAAGGAAATGACATTTACACTGAAGCTTGATGAATGACTAGATGTTGGCTATGCAAAGAGGGAAGAAACAACATTCCAGGCAGAGGAAGTGGCATATGTAAAGGCCCAAACATGATGTGAGGGAACTTGGCAAGTTATCTAAAATAGATTTACATTATAAGATATGTATGTTATATGGCCATGTATATACTGAGGTAAAACAAGAATGAATGTGGAGGAATTAATTAAGTTTATTATAGTGGTTTGTGAAGAAGATGAAGTAGGAAGGAGATGACTGACAGCTTGAAGTAGAGAGGTGTCAGTAGAGATAATGAGAAGTGGATAGATTTATTTAGAAAGTAGGGCTGGGCGCAGTGGCTCACACCTGTAATACCTGCACTTTAGGAGGCCAAAGTGAGTGGATCACTTAAGATCAGGGGTTTGAGACCAGCCTCAGCAACATGGTGAAACCCCGTCTCTACTAAAAATATAAAAATTAGCCGGCCGTGATGGTGCCTCCCTGTACCAGCTGCTGAGGTGGGAGGATCGCCTGAGCCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATTGCAACACTGCACTCTAGCCTGGGCGACAGAGCGAGACTCCATCTCACACAAAGAAAACAAAAAAAAAAAAAAAGGAAAAAATGGATCTAGGGCCAGGTGAGGTGGCTCATCCCTGTAATCTCGACATTTTGGGAGGCTGAGGTGGGAGGAATAGGTTGAGCTCAGAGTTCAAGCCAGCCTGGACAATGTAGTGAGACCATGTCTCTACCAGAAAAAAAAAATGCCAGGCTCGATGGCGCGTGCCGGTGGTCCCAACTACCGGGAGGCTGAGGTGGGAGGATCCCTTGAGCCCAGGACACTGCAGTGAGCAGTGTTTGTACCACTGCACTCCAGCCTAGGTGAGAGTGAGACCCTGTCTGAATAATAATAATAATAATGATAATGATAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3250:HG2_10X_SVrefine210Xhap12_3251:HG3_10X_allpass_844:HG2_PB_assemblyticsfalcon_19329:HG2_PB_assemblyticsPBcR_18689:HG4_10X_allpass_802:HG2_10X_allpass_685:HG2_PB_HySA_8326:HG4_PB_pbsv_4452:HG2_PB_pbsv_4423:HG2_Ill_breakscan11_606:HG3_PB_pbsv_4307:HG2_Ill_tnscope_469:HG4_Ill_MetaSV_3700:HG4_Ill_GATKHCSBGrefine_3079:HG3_Ill_MetaSV_3701:HG3_Ill_GATKHCSBGrefine_2951:HG2_Ill_MetaSV_3537:HG2_Ill_GATKHCSBGrefine_2947:HG4_PB_SVrefine2PBcRDovetail_2256:HG4_PB_SVrefine2Falcon1Dovetail_2709:HG4_Ill_SVrefine2DISCOVARDovetail_3360:HG3_PB_SVrefine2PBcRDovetail_2019:HG3_Ill_SVrefine2DISCOVARDovetail_3376:HG2_PB_SVrefine2PBcRplusDovetail_8066:HG2_PB_SVrefine2PB10Xhap12_3246:HG2_PB_SVrefine2Falcon2Bionano_2124:HG2_PB_SVrefine2Falcon1plusDovetail_8690:HG2_Ill_SVrefine2DISCOVARplusDovetail_9384;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3250:HG4_PB_SVrefine2PBcRDovetail_2256:HG4_PB_SVrefine2Falcon1Dovetail_2709:HG4_Ill_SVrefine2DISCOVARDovetail_3360:HG3_PB_SVrefine2PBcRDovetail_2019:HG3_Ill_SVrefine2DISCOVARDovetail_3376:HG2_PB_SVrefine2PBcRplusDovetail_8066:HG2_PB_SVrefine2PB10Xhap12_3246:HG2_PB_SVrefine2Falcon2Bionano_2124:HG2_PB_SVrefine2Falcon1plusDovetail_8690:HG2_Ill_SVrefine2DISCOVARplusDovetail_9384;NumExactMatchSVs=11;ClusterMaxShiftDist=0.22471;ClusterMaxSizeDiff=0.22471;ClusterMaxEditDist=0.22471;PBcalls=13;Illcalls=11;TenXcalls=5;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1367;DistBack=3128;DistForward=-1223;DistMin=-1223;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=145;REFWIDENED=4:40024908-40026419;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9993;PctRecOverlap=0.9942;SizeDiff=1;StartDistance=-8;EndDistance=-7;GTMatch=0;TruScore=99;MatchId=2772.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:40:1/1:0:22:0:10:./.:0:0:0:0:1/1:1:8:0/1:8:71:.:.:.
chr4	40984211	HG2_Ill_GATKHC_7331	GGAAAGAAAGAAAAGAAAGAAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_6119:HG4_PB_pbsv_4456:HG2_PB_pbsv_4428:HG4_Ill_svaba_5752:HG4_Ill_Krunchall_6431:HG4_Ill_GATKHC_7426:HG4_Ill_GATKHCSBGrefine_3091:HG4_Ill_250bpfermikitraw_6177:HG4_Ill_150bpfermikitraw_5892:HG2_Ill_Krunchall_6233:HG2_Ill_GATKHC_7331:HG2_Ill_GATKHCSBGrefine_2954;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6119:HG4_Ill_svaba_5752:HG4_Ill_Krunchall_6431:HG4_Ill_GATKHC_7426:HG4_Ill_GATKHCSBGrefine_3091:HG4_Ill_250bpfermikitraw_6177:HG4_Ill_150bpfermikitraw_5892:HG2_Ill_Krunchall_6233:HG2_Ill_GATKHC_7331:HG2_Ill_GATKHCSBGrefine_2954;NumExactMatchSVs=10;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.0540541;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-55;DistBack=-24;DistForward=-36;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=4:40984210-40984279;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2773.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:29:./.:19:9:4:20:./.:0:0:0:0:0/1:10:19:./.:.:.:.:.:.
chr4	42557102	HG3_Ill_GATKHC_7355	GTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAATCTATCTATCTATC	G	20	PASS	ClusterIDs=HG2_PB_HySA_8354:HG2_PB_pbsv_4434:HG3_Ill_Krunchall_6120:HG3_Ill_GATKHC_7355:HG3_Ill_GATKHCSBGrefine_2963:HG3_Ill_250bpfermikitraw_5936:HG2_Ill_manta_1232:HG2_Ill_SpiralSDKrefine_12181:HG2_Ill_Krunchall_6244:HG2_Ill_GATKHC_7343:HG2_Ill_GATKHCSBGrefine_2959:HG2_Ill_250bpfermikitraw_6129:HG2_Ill_150bpfermikitraw_5685;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5685:HG2_Ill_250bpfermikitraw_6129:HG2_Ill_GATKHCSBGrefine_2959:HG2_Ill_GATKHC_7343:HG2_Ill_Krunchall_6244:HG2_Ill_SpiralSDKrefine_12181:HG2_Ill_manta_1232:HG3_Ill_250bpfermikitraw_5936:HG3_Ill_GATKHCSBGrefine_2963:HG3_Ill_GATKHC_7355:HG3_Ill_Krunchall_6120;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0441176;ClusterMaxSizeDiff=0.0437956;ClusterMaxEditDist=0.0588235;PBcalls=2;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-69;DistBack=47304;DistForward=58412;DistMin=47304;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=44;REFWIDENED=4:42557103-42557215;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:57:33:1|0:3:30:49:0:./.:0:0:0:0:0/1:28:16:./.:.:.:.:.:.
chr4	43538844	HG2_Ill_scalpel_4339	GCTCTGTGTCTAGCTAAAGTATTGTAAATGCACTAATCAGCACTCTGTAAAAACACATGAATCAGCA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_5694:HG3_PB_pbsv_4326:HG2_PB_pbsv_4440:HG4_PB_pbsv_4468:HG3_PB_HySA_6809:HG2_PB_HySA_8363:HG3_PB_assemblyticsfalcon_19283:HG4_PB_assemblyticsfalcon_18941:HG4_Ill_svaba_5771:HG4_Ill_scalpel_4244:HG4_Ill_manta_1087:HG4_Ill_Krunchall_6453:HG4_Ill_GATKHC_7451:HG4_Ill_GATKHCSBGrefine_3103:HG4_Ill_250bpfermikitraw_6198:HG4_Ill_150bpfermikitraw_5916:HG3_Ill_svaba_5755:HG3_Ill_scalpel_4425:HG3_Ill_manta_1005:HG3_Ill_Krunchall_6129:HG3_Ill_GATKHC_7367:HG3_Ill_GATKHCSBGrefine_2967:HG3_Ill_250bpfermikitraw_5945:HG3_Ill_150bpfermikitraw_5762:HG2_PB_assemblyticsfalcon_19359:HG2_PB_assemblyticsPBcR_18716:HG2_Ill_svaba_5649:HG2_Ill_scalpel_4339:HG2_Ill_manta_1236:HG2_Ill_Krunchall_6251:HG2_Ill_GATKHC_7354:HG2_Ill_GATKHCSBGrefine_2964:HG2_Ill_250bpfermikitraw_6137;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5694:HG4_PB_assemblyticsfalcon_18941:HG4_Ill_svaba_5771:HG4_Ill_scalpel_4244:HG4_Ill_manta_1087:HG4_Ill_Krunchall_6453:HG4_Ill_GATKHC_7451:HG4_Ill_GATKHCSBGrefine_3103:HG4_Ill_250bpfermikitraw_6198:HG4_Ill_150bpfermikitraw_5916:HG3_Ill_svaba_5755:HG3_Ill_scalpel_4425:HG3_Ill_manta_1005:HG3_Ill_Krunchall_6129:HG3_Ill_GATKHC_7367:HG3_Ill_GATKHCSBGrefine_2967:HG3_Ill_250bpfermikitraw_5945:HG3_Ill_150bpfermikitraw_5762:HG2_PB_assemblyticsfalcon_19359:HG2_PB_assemblyticsPBcR_18716:HG2_Ill_svaba_5649:HG2_Ill_scalpel_4339:HG2_Ill_manta_1236:HG2_Ill_Krunchall_6251:HG2_Ill_GATKHC_7354:HG2_Ill_GATKHCSBGrefine_2964:HG2_Ill_250bpfermikitraw_6137;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.0454545;PBcalls=9;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=11172;DistForward=24762;DistMin=11172;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=4:43538843-43538929;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2775.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:2:21:0:14:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr4	43751806	HG4_PB_SVrefine2PBcRDovetail_2267	ACAGGGACAGGGATTGAATGAACAAATGTGAATTAAAATTATAGAGAACAAGTTTCAGTATTTAAACAAGGGAAAAGTTATGATGAATGTGGCATTTGGGAAACAATACTCTCTCGAATATATAAAGCAATGGGATGAGGAAATATATGTAGTTACAGAGGAATTATGGAATACTAGAGATACAACTATGACAGCATTTGGTGACTGACTGGATACAAGGGGAAAGAAGAACAGAATATCAAAGAGAAAGACAACTTTACTAGACACAGTAGGCTTTATATGTCATTGAAAAATGATAAGTTGTTCTAGTTTGGAAGCAAAAAT	CTAATTTTCTGAGC	20	PASS	ClusterIDs=HG4_Ill_Krunchall_6454:HG2_10X_allpass_689:HG2_PB_pbsv_4441:HG2_Ill_SpiralSDKrefine_12186:HG4_PB_assemblyticsfalcon_18943:HG4_PB_SVrefine2PBcRDovetail_2267:HG4_PB_SVrefine2Falcon1Dovetail_2719:HG4_Ill_manta_1088:HG4_Ill_SVrefine2DISCOVARDovetail_3380:HG3_PB_SVrefine2Falcon1Dovetail_2746:HG2_PB_assemblyticsPBcR_18718:HG2_PB_SVrefine2PBcRplusDovetail_8073:HG2_PB_SVrefine2Falcon2Bionano_2134:HG2_PB_PB10Xdip_22274:HG2_10X_SVrefine210Xhap12_3267:HG2_PB_SVrefine2PB10Xhap12_3258:HG2_PB_PB10Xdip_22273:HG3_PB_assemblyticsfalcon_19285:HG4_Ill_svaba_5772:HG4_Ill_MetaSV_3705:HG2_Ill_svaba_5650:HG4_10X_allpass_806:HG4_PB_HySA_6656:HG4_PB_pbsv_4469:HG2_PB_HySA_8366;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3267:HG2_PB_PB10Xdip_22274:HG2_PB_SVrefine2Falcon2Bionano_2134:HG2_PB_SVrefine2PBcRplusDovetail_8073:HG2_PB_assemblyticsPBcR_18718:HG3_PB_SVrefine2Falcon1Dovetail_2746:HG4_Ill_SVrefine2DISCOVARDovetail_3380:HG4_Ill_manta_1088:HG4_PB_SVrefine2Falcon1Dovetail_2719:HG4_PB_SVrefine2PBcRDovetail_2267:HG4_PB_assemblyticsfalcon_18943;NumExactMatchSVs=11;ClusterMaxShiftDist=0.1184;ClusterMaxSizeDiff=0.1184;ClusterMaxEditDist=0.170886;PBcalls=15;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-107;DistForward=-215;DistMin=-215;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:43751806-43752129;PctSeqSimilarity=0.9173;PctSizeSimilarity=0.9839;PctRecOverlap=0.9414;SizeDiff=5;StartDistance=1;EndDistance=19;GTMatch=0;TruScore=94;MatchId=2776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:38:0|1:24:2:1:29:./.:0:0:0:0:0/1:47:18:0/1:39:18:.:.:.
chr4	43931495	HG2_PB_assemblyticsPBcR_18721	ACAGAGAACTGAGAATTGAGAGTAATGAGCACCTATTTGATGTTTGTGACCAAAAAAATAAATATTGTCATCAAGGCATATAATTTACACACTATTAAGTTTTTCTTTTTTTGTTTTTGTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCCCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACCACGCCTGGCTAATTTTTTGTATTTTTTAGTAGACACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_4470:HG2_PB_HySA_8371:HG4_Ill_Krunchall_6458:HG2_Ill_Krunchall_6256:HG4_Ill_MetaSV_3706:HG3_PB_HySA_6813:HG3_Ill_MetaSV_3705:HG2_Ill_tnscope_470:HG2_Ill_MetaSV_3539:HG3_PB_assemblyticsfalcon_19288:HG4_PB_assemblyticsfalcon_18947:HG4_PB_SVrefine2PBcRDovetail_2268:HG4_PB_SVrefine2Falcon1Dovetail_2720:HG4_Ill_svaba_5776:HG4_Ill_scalpel_4248:HG4_Ill_SVrefine2DISCOVARDovetail_3383:HG4_Ill_GATKHCSBGrefine_3109:HG4_10X_allpass_807:HG3_PB_pbsv_4328:HG3_PB_SVrefine2PBcRDovetail_2026:HG3_Ill_svaba_5759:HG3_Ill_scalpel_4429:HG3_Ill_manta_1006:HG3_Ill_SVrefine2DISCOVARDovetail_3396:HG3_Ill_GATKHCSBGrefine_2968:HG3_10X_allpass_849:HG2_PB_pbsv_4443:HG2_PB_assemblyticsfalcon_19361:HG2_PB_assemblyticsPBcR_18721:HG2_PB_SVrefine2PBcRplusDovetail_8074:HG2_PB_SVrefine2PB10Xhap12_3259:HG2_PB_SVrefine2Falcon2Bionano_2135:HG2_PB_SVrefine2Falcon1plusDovetail_8699:HG2_Ill_svaba_5654:HG2_Ill_scalpel_4342:HG2_Ill_manta_1238:HG2_Ill_SpiralSDKrefine_12188:HG2_Ill_SVrefine2DISCOVARplusDovetail_9402:HG2_Ill_GATKHCSBGrefine_2970:HG2_10X_allpass_690:HG2_10X_SVrefine210Xhap12_3269:HG2_Ill_breakscan11_607;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3269:HG2_10X_allpass_690:HG2_Ill_GATKHCSBGrefine_2970:HG2_Ill_SVrefine2DISCOVARplusDovetail_9402:HG2_Ill_SpiralSDKrefine_12188:HG2_Ill_manta_1238:HG2_Ill_scalpel_4342:HG2_Ill_svaba_5654:HG2_PB_SVrefine2Falcon1plusDovetail_8699:HG2_PB_SVrefine2Falcon2Bionano_2135:HG2_PB_SVrefine2PB10Xhap12_3259:HG2_PB_SVrefine2PBcRplusDovetail_8074:HG2_PB_assemblyticsPBcR_18721:HG2_PB_assemblyticsfalcon_19361:HG2_PB_pbsv_4443:HG3_10X_allpass_849:HG3_Ill_GATKHCSBGrefine_2968:HG3_Ill_SVrefine2DISCOVARDovetail_3396:HG3_Ill_manta_1006:HG3_Ill_scalpel_4429:HG3_Ill_svaba_5759:HG3_PB_SVrefine2PBcRDovetail_2026:HG3_PB_pbsv_4328:HG4_10X_allpass_807:HG4_Ill_GATKHCSBGrefine_3109:HG4_Ill_SVrefine2DISCOVARDovetail_3383:HG4_Ill_scalpel_4248:HG4_Ill_svaba_5776:HG4_PB_SVrefine2Falcon1Dovetail_2720:HG4_PB_SVrefine2PBcRDovetail_2268:HG4_PB_assemblyticsfalcon_18947;NumExactMatchSVs=31;ClusterMaxShiftDist=0.00584795;ClusterMaxSizeDiff=0.00584795;ClusterMaxEditDist=0.00585652;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-341;DistBack=42166;DistForward=-341;DistMin=-341;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:43931496-43931837;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2777.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:80:1/1:0:17:0:10:./.:0:0:0:0:1/1:0:36:./.:1:5:.:.:.
chr4	44971996	HG3_PB_assemblyticsfalcon_19297	TTTATTTATTATATTTATATATATTTATATATATAATATATTAATATATTTATTATTATTATTATTTATTTTTATATTTATATATTTATATTTATATTTATATTTATATTTATATATATTTATATATTATTAATATATTTATTATTATTATTATTATTATTTATTATTTATTA	T	20	PASS	ClusterIDs=HG3_PB_HySA_6823:HG2_PB_HySA_8381:HG4_PB_assemblyticsfalcon_18956:HG4_PB_SVrefine2Falcon1Dovetail_2725:HG4_Ill_svaba_5783:HG4_Ill_manta_1091:HG4_Ill_MetaSV_3711:HG4_Ill_GATKHC_7464:HG4_Ill_GATKHCSBGrefine_3115:HG4_10X_allpass_810:HG3_PB_assemblyticsfalcon_19297:HG3_PB_SVrefine2PBcRDovetail_2034:HG3_Ill_svaba_5769:HG3_Ill_manta_1012:HG3_Ill_MetaSV_3711:HG3_Ill_GATKHCSBGrefine_2978:HG3_CG_vcfBeta_2555:HG3_10X_allpass_854:HG2_PB_assemblyticsfalcon_19370:HG2_PB_assemblyticsPBcR_18729:HG2_PB_SVrefine2PBcRplusDovetail_8078:HG2_PB_SVrefine2PB10Xhap12_3265:HG2_PB_SVrefine2Falcon1plusDovetail_8704:HG2_Ill_svaba_5660:HG2_Ill_manta_1243:HG2_Ill_breakscan11_609:HG2_Ill_SpiralSDKrefine_12195:HG2_Ill_SVrefine2DISCOVARplusDovetail_9407:HG2_Ill_MetaSV_3543:HG2_Ill_GATKHC_7366:HG2_Ill_GATKHCSBGrefine_2976:HG2_CG_vcfBeta_2645:HG2_10X_SVrefine210Xhap12_3274:HG4_PB_pbsv_4476:HG4_Ill_Krunchall_6463:HG2_PB_pbsv_4449:HG2_Ill_Krunchall_6267:HG3_Ill_Spiral_4822:HG2_PB_SVrefine2PB10Xhap12_3264:HG3_PB_pbsv_4338;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3274:HG2_CG_vcfBeta_2645:HG2_Ill_GATKHCSBGrefine_2976:HG2_Ill_GATKHC_7366:HG2_Ill_MetaSV_3543:HG2_Ill_SVrefine2DISCOVARplusDovetail_9407:HG2_Ill_SpiralSDKrefine_12195:HG2_Ill_breakscan11_609:HG2_Ill_manta_1243:HG2_Ill_svaba_5660:HG2_PB_SVrefine2Falcon1plusDovetail_8704:HG2_PB_SVrefine2PB10Xhap12_3265:HG2_PB_SVrefine2PBcRplusDovetail_8078:HG2_PB_assemblyticsPBcR_18729:HG2_PB_assemblyticsfalcon_19370:HG3_10X_allpass_854:HG3_CG_vcfBeta_2555:HG3_Ill_GATKHCSBGrefine_2978:HG3_Ill_MetaSV_3711:HG3_Ill_manta_1012:HG3_Ill_svaba_5769:HG3_PB_SVrefine2PBcRDovetail_2034:HG3_PB_assemblyticsfalcon_19297:HG4_10X_allpass_810:HG4_Ill_GATKHCSBGrefine_3115:HG4_Ill_GATKHC_7464:HG4_Ill_MetaSV_3711:HG4_Ill_manta_1091:HG4_Ill_svaba_5783:HG4_PB_SVrefine2Falcon1Dovetail_2725:HG4_PB_assemblyticsfalcon_18956;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0898876;ClusterMaxSizeDiff=0.0898876;ClusterMaxEditDist=0.0898876;PBcalls=15;Illcalls=20;TenXcalls=3;CGcalls=2;PBexactcalls=9;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=2;HG2count=19;HG3count=11;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-172;DistBack=6067;DistForward=-172;DistMin=-172;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:44971997-44972169;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2778.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:31:./.:14:11:3:16:./.:0:0:0:0:0/1:52:29:./.:.:.:.:.:.
chr4	46202795	HG4_Ill_GATKHCSBGrefine_3121	GTCTGAGGAACAGGGAGGCTAATTAATTTACCCAGTATTACACCCATTTGCAATGGGAATAGATTTAAACTCAGAACTTTCTCACAAAAAGTTCTAATTTATAACAACTCTGGTAGATTGACAATTGAAAAATGGGGAAGTATAAAAAAGAAAAAATATAATTCCATAAATAAGTAACGGATGTCACTCTTATCCCTTATCATTTTTGCACACTCCCTTCCTTGCAGGGCACAGCCTGGTTAAATCCAAACTACCATCCACTCTGCCCCTGATTCCATGTAGCTGAACACACTTATATTAGCATATAAACATGGTGAAGTTTTTCTCATTTTTTAAAAAAGTCTTCTCTTTTATTTTCCAACTATGGGCTGTCCCATTTACTCAGACTTCTATGAAACAAAACTTTGAAGCATCTTTATCCTGTCAATATCCAATTTCTTTGTCAATCCTTCTCTCTTAAATTTACTTATCTGGCTTTGACTTTTCCACTTTTCAGAAACTACTCTTGTCAAGTATGCCAATGACGTTCACTTGGCTAAATCTAATGGTCACTTTCAGTCTTCTTATATTAGACCATTCTGTACCATTTAACCAAGATGAGTGTTCACCCTTATCCTTGATAACTTTTCTGTATACACCTAGCTTTCAAAACATCACACTCTTGATTTTTCTACCCCTCCAAAATTTCTTTTCATTTTCTTTTGCTGTCTGTGCTCCTTCTCACCAAACTCTTAATATTTCAGTGTTCCCAGTTCAGGAATTTTATGTTTTCTGTCTGAATCCAGCCCTAAGGAGACACCACCTATATGCTGACAATATCCAAATTAATATTTTCATCTGAGACCTCTCTGCAAGACACTAGATCATATATAATTTTATAACTTCCTGTGTAATATCTCTACTTACACATCTAATGGCTTTCAAAACTAAACATATCTGAAGAAAAAAAAAAACCCACCATGCTACACTCCTTTATTCCCATCTCAGGTAAGAGAAAATCTATCCTCTAGTTGCTCAAAATAAAAACTTTTTTTTTCTGTTTCATTTTGAATAGTTTCTACTGCTCTCTTCAAGTTTAGTAAGTTTTTATTCTGTCATGTCTAATCTGCCATTAACTCCATTTAGCATGTTTATCCCTGAGTCATTATAGTTTTTTTTCTGGAAGTTTGATTGGATCTTATCTATATTTTCTATGTCTCTATTTACCTATTTATTTAAACATATGTAATGCAGTTATAATAGCTATTTCAGTGTCATTTTCTGTTAATCTAAAGTCCATGTCAGTGTTTATTGACTAATTCTTGCCATTTTGTGTTGTGTCTTCCTGCCTTGAGTCATACTTGATTATATGTCAAACACTGTGGATTTTACCTTATTGAGTGCTAGGTACATTTTCATTCCTGTAAGTTTTTGAGCTTTGTTTTGGCATGTAGTTAGTTACTTGGAAACATTTTGCTTTTTTTCATGCCCTGCTTCTATGACTTTTAGGTAGTTCTGGAATGGGGCTGAGTCTCTGGCTAATTATTCTACACTACTTGAGCAAGAGCTTCCTGAGTTCTCTACTCAATGCCCTACGTATTATGAGTTTCACTAGTCTGGTTCATAGGAATAAGCATTGATACCACCCCTATTGGAGGAATGGCCAGTATTTCCTCTGTCCATTTTGAAAGTTCTCTTCCAAGATGGGAGTAGTTTCCTCTGATGTTTGCTCTGATGAATAACTTTCAGAAAACTCAAGGTGAACCATCTGCATATCTCCAGTGTTCTCTCTCTCTGTGCAACTCTCTCTTTTCTGGTGATCTGTTATATTAGTCTGTTCTCACACTACTATAAGGACATACCTGAGACTGAATAATTTATGTTAAAAAAGAGGTTTAATGGACTCAGATCCACATGGCTGGGGAGGCCTCACAATCATTGCGGAAGGTGAAGGAAGAGCAAAGGCAGGTCTTACATGGTGGCAGGCAAGACGGTGTGCGCAGGGGAGCTGCCCTTTATAAAACCATCAGACCTCATGAGACCTATTCACTATCATGAGAAGAGCATAGGCAACCCCCCACCCCCCTAGCATGATTCAAAATTGCCTTGCACTGGGTCCCCCTATGACATGTGGGGATTATGGGAGCTGCAATTCAAGATGAGATTTAAGTGGTGAGACAGCCAAACCATATCATCTGTCCTATGAACTACAGTGGCTTCGTTTCTCTGGACTCTCAGCTCTATCTTCTAAAC	G	20	PASS	ClusterIDs=HG4_10X_allpass_812:HG3_PB_assemblyticsfalcon_19311:HG2_PB_assemblyticsPBcR_18746:HG2_10X_allpass_693:HG3_10X_allpass_856:HG2_PB_HySA_8387:HG4_Ill_Krunchall_6475:HG2_Ill_Krunchall_6282:HG4_PB_assemblyticsfalcon_18972:HG2_PB_assemblyticsfalcon_19387:HG2_Ill_tnscope_473:HG4_PB_pbsv_4483:HG4_PB_SVrefine2PBcRDovetail_2277:HG4_PB_SVrefine2Falcon1Dovetail_2732:HG4_Ill_SVrefine2DISCOVARDovetail_3399:HG4_Ill_MetaSV_3713:HG4_Ill_GATKHCSBGrefine_3121:HG3_PB_pbsv_4347:HG3_PB_SVrefine2PBcRDovetail_2037:HG3_PB_SVrefine2Falcon1Dovetail_2750:HG3_Ill_SVrefine2DISCOVARDovetail_3411:HG3_Ill_MetaSV_3713:HG3_Ill_GATKHCSBGrefine_2983:HG2_PB_pbsv_4458:HG2_PB_SVrefine2PBcRplusDovetail_8084:HG2_PB_SVrefine2PB10Xhap12_3270:HG2_PB_SVrefine2Falcon2Bionano_2142:HG2_PB_SVrefine2Falcon1plusDovetail_8709:HG2_Ill_SpiralSDKrefine_12201:HG2_Ill_SVrefine2DISCOVARplusDovetail_9415:HG2_Ill_MetaSV_3545:HG2_Ill_GATKHCSBGrefine_2983:HG2_10X_SVrefine210Xhap12_3279:HG2_Ill_breakscan11_610;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3279:HG2_Ill_GATKHCSBGrefine_2983:HG2_Ill_MetaSV_3545:HG2_Ill_SVrefine2DISCOVARplusDovetail_9415:HG2_Ill_SpiralSDKrefine_12201:HG2_PB_SVrefine2Falcon1plusDovetail_8709:HG2_PB_SVrefine2Falcon2Bionano_2142:HG2_PB_SVrefine2PB10Xhap12_3270:HG2_PB_SVrefine2PBcRplusDovetail_8084:HG2_PB_pbsv_4458:HG3_Ill_GATKHCSBGrefine_2983:HG3_Ill_MetaSV_3713:HG3_Ill_SVrefine2DISCOVARDovetail_3411:HG3_PB_SVrefine2Falcon1Dovetail_2750:HG3_PB_SVrefine2PBcRDovetail_2037:HG3_PB_pbsv_4347:HG4_Ill_GATKHCSBGrefine_3121:HG4_Ill_MetaSV_3713:HG4_Ill_SVrefine2DISCOVARDovetail_3399:HG4_PB_SVrefine2Falcon1Dovetail_2732:HG4_PB_SVrefine2PBcRDovetail_2277:HG4_PB_pbsv_4483;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00358905;ClusterMaxSizeDiff=0.00358905;ClusterMaxEditDist=0.00358905;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2231;DistBack=12632;DistForward=5586;DistMin=5586;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:46202796-46205028;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2779.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:101:1/1:0:25:0:25:./.:0:0:0:0:1/1:0:29:1/1:2:131:2428:.:.
chr4	47125524	HG2_Ill_scalpel_4360	TATATATTATAATATATTACATTATTTCATATATTATAATATATTATATATTATAATATATTACATTATTTC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_4488:HG4_Ill_scalpel_4267:HG3_Ill_scalpel_4448:HG2_PB_pbsv_4463:HG2_Ill_scalpel_4360:HG2_Ill_150bpfermikitraw_5729;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5729:HG2_Ill_scalpel_4360:HG2_PB_pbsv_4463:HG3_Ill_scalpel_4448:HG4_Ill_scalpel_4267;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0425532;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.0567376;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-71;DistBack=-72;DistForward=-28;DistMin=-72;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=70;REFWIDENED=4:47125523-47125666;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2780.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:./.:6:14:14:5:./.:0:0:0:0:./.:1:6:./.:.:.:.:.:.
chr4	47487825	HG3_Ill_manta_1016	CACACGGGCACGTACATACACGCATTCTCACACACCTTTGTACACGCGGGCAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3283:HG4_PB_HySA_6692:HG3_PB_HySA_6838:HG2_PB_pbsv_4464:HG4_PB_pbsv_4489:HG4_Ill_svaba_5804:HG4_Ill_scalpel_4272:HG4_Ill_manta_1096:HG4_Ill_Krunchall_6493:HG4_Ill_GATKHC_7494:HG4_Ill_GATKHCSBGrefine_3125:HG4_Ill_FB_4128:HG4_Ill_250bpfermikitraw_6238:HG4_Ill_150bpfermikitraw_5955:HG3_PB_pbsv_4352:HG3_Ill_scalpel_4453:HG3_Ill_manta_1016:HG3_Ill_Krunchall_6176:HG3_Ill_GATKHC_7405:HG3_Ill_GATKHCSBGrefine_2986:HG3_Ill_250bpfermikitraw_5987:HG3_Ill_150bpfermikitraw_5799:HG2_Ill_scalpel_4365:HG2_Ill_manta_1247:HG2_Ill_SpiralSDKrefine_12208:HG2_Ill_Krunchall_6297:HG2_Ill_GATKHC_7399:HG2_Ill_GATKHCSBGrefine_2987:HG2_Ill_250bpfermikitraw_6180:HG2_Ill_150bpfermikitraw_5737:HG4_PB_SVrefine2PBcRDovetail_2282:HG4_PB_SVrefine2Falcon1Dovetail_2736:HG4_Ill_SVrefine2DISCOVARDovetail_3403:HG3_PB_SVrefine2Falcon1Dovetail_2754:HG2_PB_SVrefine2Falcon2Bionano_2149:HG2_PB_SVrefine2Falcon1plusDovetail_8714;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5737:HG2_Ill_250bpfermikitraw_6180:HG2_Ill_GATKHCSBGrefine_2987:HG2_Ill_GATKHC_7399:HG2_Ill_Krunchall_6297:HG2_Ill_SpiralSDKrefine_12208:HG2_Ill_manta_1247:HG2_Ill_scalpel_4365:HG3_Ill_150bpfermikitraw_5799:HG3_Ill_250bpfermikitraw_5987:HG3_Ill_GATKHCSBGrefine_2986:HG3_Ill_GATKHC_7405:HG3_Ill_Krunchall_6176:HG3_Ill_manta_1016:HG3_Ill_scalpel_4453:HG3_PB_pbsv_4352:HG4_Ill_150bpfermikitraw_5955:HG4_Ill_250bpfermikitraw_6238:HG4_Ill_FB_4128:HG4_Ill_GATKHCSBGrefine_3125:HG4_Ill_GATKHC_7494:HG4_Ill_Krunchall_6493:HG4_Ill_manta_1096:HG4_Ill_scalpel_4272:HG4_Ill_svaba_5804;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0784314;ClusterMaxSizeDiff=0.0784314;ClusterMaxEditDist=0.135922;PBcalls=10;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=14;NumTechs=3;NumTechsExact=2;SVLEN=-52;DistBack=3331;DistForward=-20;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=4:47487814-47487911;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:./.:20:19:5:3:./.:0:0:0:0:0/1:32:29:./.:.:.:.:.:.
chr4	48094570	HG4_Ill_svaba_5810	TGGACACATTTTTCCAAAAGTGTGACTTACAAGAGCAATGTGTAAAGGGAGAAAGAGTTAGGGCAGCA	T	20	PASS	ClusterIDs=HG2_10X_allpass_694:HG4_Ill_Cortex_2635:HG2_Ill_Cortex_6231:HG2_PB_HySA_8408:HG4_PB_HySA_6697:HG3_PB_assemblyticsfalcon_19335:HG4_PB_pbsv_4494:HG4_PB_assemblyticsfalcon_18990:HG4_Ill_svaba_5810:HG4_Ill_scalpel_4275:HG4_Ill_Krunchall_6498:HG4_Ill_GATKHC_7500:HG4_Ill_GATKHCSBGrefine_3128:HG4_Ill_250bpfermikitraw_6245:HG4_Ill_150bpfermikitraw_5961:HG4_CG_vcfBeta_2969:HG4_10X_allpass_813:HG2_PB_pbsv_4468:HG2_Ill_svaba_5693:HG2_Ill_manta_1249:HG2_Ill_SpiralSDKrefine_12212:HG2_Ill_Krunchall_6303:HG2_Ill_GATKHC_7406:HG2_Ill_GATKHCSBGrefine_2992:HG2_Ill_250bpfermikitraw_6188;NumClusterSVs=25;ExactMatchIDs=HG2_10X_allpass_694:HG4_PB_pbsv_4494:HG4_PB_assemblyticsfalcon_18990:HG4_Ill_svaba_5810:HG4_Ill_scalpel_4275:HG4_Ill_Krunchall_6498:HG4_Ill_GATKHC_7500:HG4_Ill_GATKHCSBGrefine_3128:HG4_Ill_250bpfermikitraw_6245:HG4_Ill_150bpfermikitraw_5961:HG4_CG_vcfBeta_2969:HG4_10X_allpass_813:HG2_PB_pbsv_4468:HG2_Ill_svaba_5693:HG2_Ill_manta_1249:HG2_Ill_SpiralSDKrefine_12212:HG2_Ill_Krunchall_6303:HG2_Ill_GATKHC_7406:HG2_Ill_GATKHCSBGrefine_2992:HG2_Ill_250bpfermikitraw_6188;NumExactMatchSVs=20;ClusterMaxShiftDist=0.136986;ClusterMaxSizeDiff=0.136986;ClusterMaxEditDist=0.136986;PBcalls=6;Illcalls=16;TenXcalls=2;CGcalls=1;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=1;HG2count=11;HG3count=1;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-67;DistBack=7631;DistForward=-67;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=4:48094571-48094640;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:44:./.:31:12:9:22:./.:0:0:0:0:0/1:22:17:./.:.:.:.:.:.
chr4	48122181	HG4_Ill_250bpfermikitraw_6247	TGTATATACGTATATGTGTATATATACATACACACATATATACGTATATATGTACATATATAC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_4470:HG4_PB_pbsv_4496:HG2_PB_HySA_8410:HG4_Ill_svaba_5811:HG4_Ill_GATKHC_7502:HG4_Ill_GATKHCSBGrefine_3131:HG2_Ill_GATKHCSBGrefine_2998:HG4_Ill_scalpel_4276:HG4_Ill_Krunchall_6499:HG4_Ill_250bpfermikitraw_6247:HG4_Ill_150bpfermikitraw_5963:HG3_Ill_svaba_5797:HG2_Ill_svaba_5694:HG2_Ill_scalpel_4369:HG2_Ill_Krunchall_6304:HG2_Ill_250bpfermikitraw_6189:HG2_Ill_150bpfermikitraw_5744:HG4_Ill_manta_1098:HG2_Ill_SpiralSDKrefine_12213;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5744:HG2_Ill_250bpfermikitraw_6189:HG2_Ill_Krunchall_6304:HG2_Ill_scalpel_4369:HG2_Ill_svaba_5694:HG3_Ill_svaba_5797:HG4_Ill_150bpfermikitraw_5963:HG4_Ill_250bpfermikitraw_6247:HG4_Ill_Krunchall_6499:HG4_Ill_scalpel_4276:HG4_Ill_svaba_5811;NumExactMatchSVs=11;ClusterMaxShiftDist=0.212121;ClusterMaxSizeDiff=0.212121;ClusterMaxEditDist=0.212121;PBcalls=3;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=-43;DistForward=-59;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=93;REFWIDENED=4:48122157-48122311;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:38:./.:15:34:29:0:./.:0:0:0:0:0/1:22:42:./.:.:.:.:.:.
chr4	55808674	HG4_PB_SVrefine2Falcon1Dovetail_2755	AAAAACAAAACAGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAC	A	20	PASS	ClusterIDs=HG2_PB_HySA_8471:HG2_PB_assemblyticsPBcR_18807:HG2_PB_SVrefine2PBcRplusDovetail_8110:HG4_Ill_Krunchall_6609:HG2_PB_SVrefine2PB10Xhap12_3288:HG2_Ill_Krunchall_6376:HG4_PB_assemblyticsfalcon_19025:HG3_PB_assemblyticsfalcon_19376:HG2_PB_assemblyticsfalcon_19439:HG2_PB_pbsv_4510:HG4_PB_pbsv_4528:HG4_PB_SVrefine2PBcRDovetail_2301:HG4_PB_SVrefine2Falcon1Dovetail_2755:HG4_Ill_scalpel_4296:HG4_Ill_manta_1104:HG4_Ill_SVrefine2DISCOVARDovetail_3423:HG4_Ill_MetaSV_3727:HG4_Ill_GATKHCSBGrefine_3166:HG4_10X_allpass_819:HG3_PB_SVrefine2Falcon1Dovetail_2772:HG3_Ill_manta_1024:HG3_Ill_SVrefine2DISCOVARDovetail_3439:HG3_Ill_MetaSV_3725:HG3_Ill_GATKHCSBGrefine_3020:HG3_10X_allpass_864:HG2_PB_SVrefine2Falcon2Bionano_2169:HG2_PB_SVrefine2Falcon1plusDovetail_8739:HG2_Ill_breakscan11_613:HG2_Ill_MetaSV_3557:HG2_Ill_GATKHCSBGrefine_3030:HG2_10X_allpass_699:HG2_10X_SVrefine210Xhap12_3309:HG4_Ill_MetaSV_3726:HG3_PB_pbsv_4401;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3309:HG2_10X_allpass_699:HG2_Ill_GATKHCSBGrefine_3030:HG2_Ill_MetaSV_3557:HG2_Ill_breakscan11_613:HG2_PB_SVrefine2Falcon1plusDovetail_8739:HG2_PB_SVrefine2Falcon2Bionano_2169:HG3_10X_allpass_864:HG3_Ill_GATKHCSBGrefine_3020:HG3_Ill_MetaSV_3725:HG3_Ill_SVrefine2DISCOVARDovetail_3439:HG3_Ill_manta_1024:HG3_PB_SVrefine2Falcon1Dovetail_2772:HG4_10X_allpass_819:HG4_Ill_GATKHCSBGrefine_3166:HG4_Ill_MetaSV_3727:HG4_Ill_SVrefine2DISCOVARDovetail_3423:HG4_Ill_manta_1104:HG4_Ill_scalpel_4296:HG4_PB_SVrefine2Falcon1Dovetail_2755:HG4_PB_SVrefine2PBcRDovetail_2301;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0873181;ClusterMaxSizeDiff=0.0873181;ClusterMaxEditDist=0.0873181;PBcalls=15;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-244;DistBack=23122;DistForward=-240;DistMin=-240;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=4:55808675-55808929;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:29:0|1:45:0:0:27:./.:0:0:0:0:0/1:30:29:./.:.:.:.:.:.
chr4	56923790	HG2_10X_SVrefine210Xhap12_3314	GGTTTTTTTTTTTTTTTTTTTGGGAGACGGAGTCTCTGTCATTCAGGCTAGAGTGCAGTGGCACAGTCTCAGCTCACTGCAACCTCTGTCCCCAGGTTCAAGGGAGTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCGCCACCACACCTGGCTCATTTTTTGTATTTTTTTTTTTTTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3314:HG2_Ill_SVrefine2DISCOVARplusDovetail_9456:HG4_Ill_MetaSV_3730:HG3_Ill_MetaSV_3727:HG3_PB_HySA_6916:HG2_PB_HySA_8477:HG4_Ill_svaba_5846:HG4_Ill_scalpel_4303:HG4_Ill_250bpfermikitraw_6307:HG4_Ill_150bpfermikitraw_6026:HG4_10X_allpass_820:HG3_Ill_svaba_5840:HG3_Ill_scalpel_4476:HG2_Ill_svaba_5732:HG2_Ill_scalpel_4388:HG2_Ill_MetaSV_3559:HG2_Ill_150bpfermikitraw_5814:HG4_Ill_Krunchall_6618:HG2_PB_pbsv_4514:HG4_PB_HySA_6755:HG4_PB_pbsv_4532:HG3_PB_pbsv_4406:HG4_PB_SVrefine2PBcRDovetail_2304:HG4_PB_SVrefine2Falcon1Dovetail_2758:HG4_Ill_SVrefine2DISCOVARDovetail_3435:HG3_PB_SVrefine2Falcon1Dovetail_2775:HG3_Ill_SVrefine2DISCOVARDovetail_3450:HG2_PB_SVrefine2PBcRplusDovetail_8113:HG2_PB_SVrefine2PB10Xhap12_3291:HG2_PB_SVrefine2Falcon2Bionano_2171:HG2_PB_SVrefine2Falcon1plusDovetail_8742:HG2_Ill_SVrefine2DISCOVARplusDovetail_9455;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3314:HG4_PB_SVrefine2PBcRDovetail_2304:HG4_PB_SVrefine2Falcon1Dovetail_2758:HG4_Ill_SVrefine2DISCOVARDovetail_3435:HG3_PB_SVrefine2Falcon1Dovetail_2775:HG3_Ill_SVrefine2DISCOVARDovetail_3450:HG2_PB_SVrefine2PBcRplusDovetail_8113:HG2_PB_SVrefine2PB10Xhap12_3291:HG2_PB_SVrefine2Falcon2Bionano_2171:HG2_PB_SVrefine2Falcon1plusDovetail_8742:HG2_Ill_SVrefine2DISCOVARplusDovetail_9455;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0808081;ClusterMaxSizeDiff=0.0808081;ClusterMaxEditDist=0.227273;PBcalls=13;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-189;DistBack=61963;DistForward=-11;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=188;REFWIDENED=4:56923791-56924167;PctSeqSimilarity=0.8972;PctSizeSimilarity=0.9594;PctRecOverlap=0.0758;SizeDiff=-8;StartDistance=-175;EndDistance=-183;GTMatch=0;TruScore=64;MatchId=2785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:0:28:1:17:./.:0:0:0:0:0/0:24:1:./.:.:.:.:.:.
chr4	58087336	HG2_10X_SVrefine210Xhap12_3315	TAGTAAATGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCTCAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3315:HG4_PB_assemblyticsfalcon_19033:HG3_PB_assemblyticsfalcon_19388:HG2_PB_assemblyticsfalcon_19451:HG3_Ill_Krunchall_6279:HG3_PB_HySA_6927:HG4_Ill_GATKHCSBGrefine_3175:HG3_Ill_GATKHCSBGrefine_3025:HG2_Ill_GATKHCSBGrefine_3035:HG3_Ill_manta_1026:HG2_PB_SVrefine2PB10Xhap12_3292:HG2_Ill_manta_1256:HG3_Ill_MetaSV_3729:HG4_Ill_Spiral_361:HG3_Ill_Spiral_4892:HG2_Ill_Spiral_311:HG2_Ill_breakscan11_614:HG2_Ill_tnscope_477:HG4_PB_pbsv_4536:HG4_PB_SVrefine2PBcRDovetail_2306:HG4_PB_SVrefine2Falcon1Dovetail_2760:HG4_Ill_scalpel_4311:HG4_10X_allpass_823:HG3_PB_pbsv_4411:HG3_PB_SVrefine2Falcon1Dovetail_2777:HG3_Ill_scalpel_4485:HG3_Ill_SVrefine2DISCOVARDovetail_3455:HG3_Ill_MetaSV_3728:HG3_10X_allpass_865:HG2_PB_pbsv_4516:HG2_PB_SVrefine2Falcon1plusDovetail_8743:HG2_Ill_scalpel_4396:HG2_Ill_MetaSV_3560:HG2_10X_allpass_700;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3315:HG4_PB_pbsv_4536:HG4_PB_SVrefine2PBcRDovetail_2306:HG4_PB_SVrefine2Falcon1Dovetail_2760:HG4_Ill_scalpel_4311:HG4_10X_allpass_823:HG3_PB_pbsv_4411:HG3_PB_SVrefine2Falcon1Dovetail_2777:HG3_Ill_scalpel_4485:HG3_Ill_SVrefine2DISCOVARDovetail_3455:HG3_Ill_MetaSV_3728:HG3_10X_allpass_865:HG2_PB_pbsv_4516:HG2_PB_SVrefine2Falcon1plusDovetail_8743:HG2_Ill_scalpel_4396:HG2_Ill_MetaSV_3560:HG2_10X_allpass_700;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0712468;ClusterMaxSizeDiff=0.0712468;ClusterMaxEditDist=0.0712468;PBcalls=12;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-398;DistBack=-272;DistForward=-398;DistMin=-398;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:58087337-58087748;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9975;PctRecOverlap=0.9724;SizeDiff=1;StartDistance=-11;EndDistance=-10;GTMatch=0;TruScore=98;MatchId=2786.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:20:0|1:22:2:0:16:./.:0:0:0:0:0/1:19:22:0/1:36:14:.:.:.
chr4	59323855	HG2_Ill_GATKHC_7522	AATCAGTGCTCTGTGTCTAGCTAATCTAGTGGGGACTTGGATAACTTTTATGTCTACCTAGAGGATTGTAAGTGCACCAATCAGCACTCTGTGTCTAACTAAAGGTTTGTAAACGCAACT	A	20	PASS	ClusterIDs=HG3_PB_HySA_6942:HG3_PB_pbsv_4422:HG2_PB_pbsv_4521:HG3_PB_assemblyticsfalcon_19400:HG3_PB_SVrefine2Falcon1Dovetail_2783:HG3_Ill_GATKHC_7540:HG3_Ill_GATKHCSBGrefine_3032:HG2_Ill_SpiralSDKrefine_12260:HG2_Ill_GATKHC_7522:HG2_Ill_GATKHCSBGrefine_3041:HG2_10X_SVrefine210Xhap12_3319;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3319:HG2_Ill_GATKHCSBGrefine_3041:HG2_Ill_GATKHC_7522:HG2_Ill_SpiralSDKrefine_12260:HG3_Ill_GATKHCSBGrefine_3032:HG3_Ill_GATKHC_7540:HG3_PB_SVrefine2Falcon1Dovetail_2783:HG3_PB_assemblyticsfalcon_19400;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0166667;ClusterMaxSizeDiff=0.0166667;ClusterMaxEditDist=0.0166667;PBcalls=5;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-119;DistBack=24466;DistForward=72241;DistMin=24466;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=364;REFWIDENED=4:59323632-59324114;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:25:0|1:41:0:1:23:./.:0:0:0:0:0/1:34:19:./.:.:.:.:.:.
chr4	59607590	HG4_Ill_SVrefine2DISCOVARDovetail_3453	AAAAAAGACAACACTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCAGCCACTGCACTCCAGCCTGGGCGCCAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_19044:HG4_Ill_Krunchall_6636:HG2_Ill_Krunchall_6390:HG3_PB_HySA_6944:HG4_Ill_GATKHCSBGrefine_3180:HG2_PB_SVrefine2PB10Xhap12_3299:HG3_Ill_GATKHCSBGrefine_3034:HG2_Ill_GATKHCSBGrefine_3043:HG2_PB_pbsv_4524:HG4_PB_HySA_6774:HG4_PB_pbsv_4543:HG4_PB_SVrefine2PBcRDovetail_2310:HG4_Ill_manta_1107:HG4_Ill_SVrefine2DISCOVARDovetail_3453:HG3_PB_SVrefine2PBcRDovetail_2053:HG3_Ill_manta_1027:HG2_PB_SVrefine2PBcRplusDovetail_8118:HG2_PB_SVrefine2PB10Xhap12_3298:HG2_PB_SVrefine2Falcon1plusDovetail_8747:HG2_Ill_manta_1259:HG2_10X_SVrefine210Xhap12_3321:HG2_PB_HySA_8505:HG2_Ill_tnscope_479:HG3_PB_pbsv_4425:HG3_Ill_scalpel_4498:HG3_10X_allpass_868:HG3_PB_SVrefine2Falcon1Dovetail_2785:HG4_PB_SVrefine2Falcon1Dovetail_2766;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3321:HG2_Ill_manta_1259:HG2_PB_SVrefine2Falcon1plusDovetail_8747:HG2_PB_SVrefine2PB10Xhap12_3298:HG2_PB_SVrefine2PBcRplusDovetail_8118:HG3_Ill_manta_1027:HG3_PB_SVrefine2PBcRDovetail_2053:HG4_Ill_SVrefine2DISCOVARDovetail_3453:HG4_Ill_manta_1107:HG4_PB_SVrefine2PBcRDovetail_2310;NumExactMatchSVs=10;ClusterMaxShiftDist=0.235489;ClusterMaxSizeDiff=0.235489;ClusterMaxEditDist=0.235489;PBcalls=15;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-378;DistForward=-294;DistMin=-378;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:59607590-59607910;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9969;PctRecOverlap=0.9969;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2788.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:47:0|1:29:1:0:42:./.:0:0:0:0:0/1:25:12:0/1:21:9:.:.:.
chr4	59808919	HG3_Ill_manta_1028	CAATAGAGTTTACTTGGTAAAAATGGTCAGCTATGGTATTGGAAAGAGTGCA	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_312:HG3_PB_pbsv_4428:HG2_PB_pbsv_4526:HG4_PB_pbsv_4545:HG4_PB_assemblyticsfalcon_19046:HG4_Ill_svaba_5863:HG4_Ill_scalpel_4319:HG4_Ill_manta_1108:HG4_Ill_Krunchall_6639:HG4_Ill_GATKHCSBGrefine_3181:HG4_Ill_250bpfermikitraw_6326:HG4_Ill_150bpfermikitraw_6044:HG3_PB_assemblyticsfalcon_19407:HG3_Ill_svaba_5865:HG3_Ill_scalpel_4500:HG3_Ill_manta_1028:HG3_Ill_Krunchall_6296:HG3_Ill_GATKHCSBGrefine_3035:HG3_Ill_250bpfermikitraw_6081:HG3_Ill_150bpfermikitraw_5901:HG2_PB_assemblyticsfalcon_19469:HG2_PB_assemblyticsPBcR_18830:HG2_Ill_svaba_5746:HG2_Ill_scalpel_4404:HG2_Ill_manta_1260:HG2_Ill_SpiralSDKrefine_12264:HG2_Ill_Krunchall_6393:HG2_Ill_GATKHCSBGrefine_3044:HG2_Ill_250bpfermikitraw_6278:HG2_Ill_150bpfermikitraw_5832:HG4_Ill_Spiral_362:HG3_Ill_Spiral_4915;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5832:HG2_Ill_250bpfermikitraw_6278:HG2_Ill_GATKHCSBGrefine_3044:HG2_Ill_Krunchall_6393:HG2_Ill_SpiralSDKrefine_12264:HG2_Ill_manta_1260:HG2_Ill_scalpel_4404:HG2_Ill_svaba_5746:HG2_PB_assemblyticsPBcR_18830:HG2_PB_assemblyticsfalcon_19469:HG3_Ill_150bpfermikitraw_5901:HG3_Ill_250bpfermikitraw_6081:HG3_Ill_GATKHCSBGrefine_3035:HG3_Ill_Krunchall_6296:HG3_Ill_manta_1028:HG3_Ill_scalpel_4500:HG3_Ill_svaba_5865:HG3_PB_assemblyticsfalcon_19407:HG4_Ill_150bpfermikitraw_6044:HG4_Ill_250bpfermikitraw_6326:HG4_Ill_GATKHCSBGrefine_3181:HG4_Ill_Krunchall_6639:HG4_Ill_manta_1108:HG4_Ill_scalpel_4319:HG4_Ill_svaba_5863;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0392157;PBcalls=7;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=19585;DistForward=15435;DistMin=15435;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=53;REFWIDENED=4:59808920-59809023;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:1:30:3:26:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr4	59944559	HG2_PB_SVrefine2PBcRplusDovetail_8119	TTTTTGTGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAACATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTTGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCAGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTTCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAACTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCTACACCGAAAACCCATCTGTTCATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACAGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTAAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCAGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGAAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCCATGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCTGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAGTAACAGAATCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGTCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAATTGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACGTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAGCAGCATGGTATTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGACACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCGTTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACTCATTTGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATATGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3323:HG2_10X_allpass_702:HG4_10X_allpass_825:HG4_Ill_Krunchall_6642:HG2_Ill_Krunchall_6397:HG3_PB_assemblyticsfalcon_19409:HG2_PB_assemblyticsPBcR_18832:HG4_Ill_Krunchall_6641:HG2_Ill_Krunchall_6396:HG4_PB_assemblyticsfalcon_19048:HG2_PB_assemblyticsfalcon_19471:HG4_PB_SVrefine2Falcon1Dovetail_2767:HG4_PB_pbsv_4546:HG4_PB_SVrefine2PBcRDovetail_2312:HG4_Ill_MetaSV_3736:HG3_PB_SVrefine2Falcon1Dovetail_2788:HG2_PB_pbsv_4527:HG2_PB_SVrefine2PBcRplusDovetail_8119:HG2_Ill_MetaSV_3563:HG2_PB_SVrefine2Falcon1plusDovetail_8748:HG4_Ill_SVrefine2DISCOVARDovetail_3455:HG2_PB_SVrefine2PB10Xhap12_3301:HG2_Ill_SVrefine2DISCOVARplusDovetail_9467;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_MetaSV_3563:HG2_PB_SVrefine2PBcRplusDovetail_8119:HG2_PB_pbsv_4527:HG3_PB_SVrefine2Falcon1Dovetail_2788:HG4_Ill_MetaSV_3736:HG4_PB_SVrefine2PBcRDovetail_2312:HG4_PB_pbsv_4546;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00627788;ClusterMaxSizeDiff=0.00627788;ClusterMaxEditDist=0.00627788;PBcalls=12;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-6042;DistBack=1736;DistForward=-6039;DistMin=-6039;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=4:59944555-59950607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:64:58:0|1:61:0:0:31:./.:0:0:0:0:0/1:49:28:0/1:346:185:6258:.:.
chr4	59985387	HG3_Ill_Cortex_2657	TGTTCTTTTTCTCTGTGTAGGGAGGACAGCTCTCACATGAGGGTCTTCTGATCTACTTTCAGAGAAGGTAAAGATCAAAGCGTCTTTCTAGCACGCACTCTTTCTACG	T	20	PASS	ClusterIDs=HG3_PB_pbsv_4429:HG3_PB_HySA_6948:HG3_Ill_MetaSV_3735:HG2_PB_HySA_8512:HG4_PB_pbsv_4547:HG4_PB_SVrefine2PBcRDovetail_2313:HG4_PB_SVrefine2Falcon1Dovetail_2768:HG4_Ill_svaba_5865:HG4_Ill_scalpel_4320:HG4_Ill_manta_1110:HG4_Ill_SVrefine2DISCOVARDovetail_3456:HG4_Ill_MetaSV_3737:HG4_Ill_GATKHC_7624:HG4_Ill_GATKHCSBGrefine_3183:HG4_Ill_Cortex_2642:HG4_Ill_250bpfermikitraw_6328:HG4_Ill_150bpfermikitraw_6046:HG4_CG_vcfBeta_3003:HG4_10X_allpass_826:HG3_PB_SVrefine2PBcRDovetail_2054:HG3_PB_SVrefine2Falcon1Dovetail_2789:HG3_Ill_svaba_5867:HG3_Ill_scalpel_4501:HG3_Ill_manta_1030:HG3_Ill_SVrefine2DISCOVARDovetail_3468:HG3_Ill_GATKHC_7548:HG3_Ill_GATKHCSBGrefine_3036:HG3_Ill_Cortex_2657:HG3_Ill_250bpfermikitraw_6084:HG3_Ill_150bpfermikitraw_5904:HG3_CG_vcfBeta_2592:HG3_10X_allpass_869:HG2_PB_SVrefine2PBcRplusDovetail_8120:HG2_PB_SVrefine2PB10Xhap12_3302:HG2_PB_SVrefine2Falcon2Bionano_2174:HG2_Ill_svaba_5748:HG2_Ill_scalpel_4406:HG2_Ill_manta_1262:HG2_Ill_SpiralSDKrefine_12269:HG2_Ill_SVrefine2DISCOVARplusDovetail_9468:HG2_Ill_MetaSV_3564:HG2_Ill_GATKHC_7534:HG2_Ill_GATKHCSBGrefine_3045:HG2_Ill_Cortex_6256:HG2_Ill_250bpfermikitraw_6281:HG2_Ill_150bpfermikitraw_5834:HG2_CG_vcfBeta_2683:HG2_10X_allpass_703:HG2_10X_SVrefine210Xhap12_3324:HG2_PB_pbsv_4528:HG2_Ill_breakscan11_615:HG4_PB_assemblyticsfalcon_19049:HG3_PB_assemblyticsfalcon_19410:HG2_PB_assemblyticsfalcon_19472:HG2_PB_assemblyticsPBcR_18833:HG4_Ill_Krunchall_6643:HG3_Ill_Krunchall_6300:HG2_Ill_Krunchall_6398;NumClusterSVs=58;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3324:HG2_10X_allpass_703:HG2_CG_vcfBeta_2683:HG2_Ill_150bpfermikitraw_5834:HG2_Ill_250bpfermikitraw_6281:HG2_Ill_Cortex_6256:HG2_Ill_GATKHCSBGrefine_3045:HG2_Ill_GATKHC_7534:HG2_Ill_MetaSV_3564:HG2_Ill_SVrefine2DISCOVARplusDovetail_9468:HG2_Ill_SpiralSDKrefine_12269:HG2_Ill_manta_1262:HG2_Ill_scalpel_4406:HG2_Ill_svaba_5748:HG2_PB_SVrefine2Falcon2Bionano_2174:HG2_PB_SVrefine2PB10Xhap12_3302:HG2_PB_SVrefine2PBcRplusDovetail_8120:HG3_10X_allpass_869:HG3_CG_vcfBeta_2592:HG3_Ill_150bpfermikitraw_5904:HG3_Ill_250bpfermikitraw_6084:HG3_Ill_Cortex_2657:HG3_Ill_GATKHCSBGrefine_3036:HG3_Ill_GATKHC_7548:HG3_Ill_SVrefine2DISCOVARDovetail_3468:HG3_Ill_manta_1030:HG3_Ill_scalpel_4501:HG3_Ill_svaba_5867:HG3_PB_SVrefine2Falcon1Dovetail_2789:HG3_PB_SVrefine2PBcRDovetail_2054:HG4_10X_allpass_826:HG4_CG_vcfBeta_3003:HG4_Ill_150bpfermikitraw_6046:HG4_Ill_250bpfermikitraw_6328:HG4_Ill_Cortex_2642:HG4_Ill_GATKHCSBGrefine_3183:HG4_Ill_GATKHC_7624:HG4_Ill_MetaSV_3737:HG4_Ill_SVrefine2DISCOVARDovetail_3456:HG4_Ill_manta_1110:HG4_Ill_scalpel_4320:HG4_Ill_svaba_5865:HG4_PB_SVrefine2Falcon1Dovetail_2768:HG4_PB_SVrefine2PBcRDovetail_2313:HG4_PB_pbsv_4547;NumExactMatchSVs=45;ClusterMaxShiftDist=0.0185185;ClusterMaxSizeDiff=0.0185185;ClusterMaxEditDist=0.0277778;PBcalls=16;Illcalls=35;TenXcalls=4;CGcalls=3;PBexactcalls=8;Illexactcalls=30;TenXexactcalls=4;CGexactcalls=3;HG2count=23;HG3count=18;HG4count=17;NumTechs=4;NumTechsExact=4;SVLEN=-107;DistBack=16826;DistForward=10070;DistMin=10070;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:59985388-59985494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2791.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:58:1/1:0:5:1:6:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr4	60589089	HG4_Ill_GATKHCSBGrefine_3185	TTTCAGGTACGCAAATCAGACTCAGATTTGGTCTTTTCACATAGTCCCACATTTCTCAGAGGCTTTGTTCACTTCTTTTTACTCTTTTTTCTCTAAACTTCTCTTCTCGCTTCATTTCA	T	20	PASS	ClusterIDs=HG3_PB_HySA_6958:HG2_PB_SVrefine2PBcRplusDovetail_8122:HG2_Ill_breakscan11_616:HG4_PB_HySA_6785:HG3_PB_pbsv_4432:HG2_PB_assemblyticsPBcR_18838:HG4_PB_assemblyticsfalcon_19054:HG3_PB_assemblyticsfalcon_19419:HG2_PB_assemblyticsfalcon_19478:HG4_Ill_Krunchall_6649:HG3_Ill_Krunchall_6305:HG2_Ill_Krunchall_6405:HG4_PB_SVrefine2PBcRDovetail_2314:HG4_PB_SVrefine2Falcon1Dovetail_2770:HG4_Ill_svaba_5867:HG4_Ill_scalpel_4323:HG4_Ill_manta_1112:HG4_Ill_SVrefine2DISCOVARDovetail_3458:HG4_Ill_MetaSV_3738:HG4_Ill_GATKHC_7628:HG4_Ill_GATKHCSBGrefine_3185:HG4_Ill_250bpfermikitraw_6333:HG4_10X_allpass_827:HG3_PB_SVrefine2PBcRDovetail_2056:HG3_PB_SVrefine2Falcon1Dovetail_2793:HG3_Ill_svaba_5872:HG3_Ill_SVrefine2DISCOVARDovetail_3470:HG3_Ill_GATKHCSBGrefine_3038:HG3_10X_allpass_870:HG2_PB_SVrefine2PB10Xhap12_3304:HG2_PB_SVrefine2Falcon2Bionano_2176:HG2_Ill_svaba_5753:HG2_Ill_manta_1264:HG2_Ill_SVrefine2DISCOVARplusDovetail_9469:HG2_Ill_MetaSV_3565:HG2_Ill_GATKHC_7540:HG2_Ill_GATKHCSBGrefine_3047:HG3_Ill_MetaSV_3736:HG2_PB_pbsv_4531:HG4_PB_pbsv_4551;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3047:HG2_Ill_GATKHC_7540:HG2_Ill_MetaSV_3565:HG2_Ill_SVrefine2DISCOVARplusDovetail_9469:HG2_Ill_manta_1264:HG2_Ill_svaba_5753:HG2_PB_SVrefine2Falcon2Bionano_2176:HG2_PB_SVrefine2PB10Xhap12_3304:HG3_10X_allpass_870:HG3_Ill_GATKHCSBGrefine_3038:HG3_Ill_SVrefine2DISCOVARDovetail_3470:HG3_Ill_svaba_5872:HG3_PB_SVrefine2Falcon1Dovetail_2793:HG3_PB_SVrefine2PBcRDovetail_2056:HG4_10X_allpass_827:HG4_Ill_250bpfermikitraw_6333:HG4_Ill_GATKHCSBGrefine_3185:HG4_Ill_GATKHC_7628:HG4_Ill_MetaSV_3738:HG4_Ill_SVrefine2DISCOVARDovetail_3458:HG4_Ill_manta_1112:HG4_Ill_scalpel_4323:HG4_Ill_svaba_5867:HG4_PB_SVrefine2Falcon1Dovetail_2770:HG4_PB_SVrefine2PBcRDovetail_2314;NumExactMatchSVs=25;ClusterMaxShiftDist=0.091954;ClusterMaxSizeDiff=0.091954;ClusterMaxEditDist=0.192308;PBcalls=16;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-118;DistBack=2307;DistForward=5535;DistMin=2307;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=4:60589090-60589211;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2792.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:29:0|1:32:2:1:26:./.:0:0:0:0:0/1:23:10:./.:.:.:.:.:.
chr4	61330107	HG2_PB_SVrefine2Falcon2Bionano_2179	TCAACAAAGACACAAAGACACTGTACAGAGGCTTAGCCCTCTGAAAACTTTCAGAAATGAAGCCAACTGACTATACTCAATTTACATCATAGTTAAAAGGACACCAACCATCCCAGATAAGAACTAATTAGCGCAAGAACTCTGTCAATTCAAAAAACCAAAGTATCCCCTCTAAATGAGCCCACTAGCTCCCTAGCAATGGTTCTTAACCAGTCTGAAATGACTCAAGGTCTGAAAGGTGAAACTGCCATTTTAAGAAAGACCCAAACTGAACTTATTGAACTAAAAAATTCATGAAAAAAGAGTTTCTTAATACAATCAGAAGTATTAACAGCAGAATAGATCCAGCTGAGAAAAGTATCTCAGAGCCCAAAGACTGGTTCTTTGAATCAACTCAGTCAGACAAAAATAAAGAAAAAATAATTAAGAAAAATGAACAAAACCTCTGAGAAATATGGGATTATGTAAAGAGACCAAATGTATGACTCTTTGGTATTCCTGAAATAAAATGAGAGAGAATAAGCAACCTGGAAAATATATTTGCGGATATAGTCCATGAAAATTTTCCTAGTCTTGCTAGAGAGGTTGACATGCAAATCCAAGAAATACAGAGAAGTCTAGCTAGATACTATGAAAGACAACCATCCCCCAGGCACATAGTCATTAGATTCAACAAGGTCAGTGCAAAATAAAAATCATAAGGCAGCTAGGAAGAAGGGGCAGGTTAACTACAGAGGGAACCCCATCAGACTGGCAGCAGACATATCAGCATAAATTTTACAAGCCAGAAGTGATTGGACCCCTATTTTCAGCACCTTAAATAAGTGAAATTCCAACCAATAATTTTATATCCTGCCATACTAAGCTTCATAAGTGAAGGAGAAATACTTTCTCAGACATGCAAACTCTGAGGGAATATGTTTTCACTAAATTGGCCTTATAAGACATCCTTCAGGGAGTGCTATATATGGAATAAAAAAAAGATACATGTTACCACAAAAACACACTTAAACACATAGCCCACAGGCACTATAAATCAACTATACAATCAAGTCTACATAACAACCAGCTAACATATATAATGACAGGTTCAAAATCACACGTATTAGTACTAAACTTGATTGTAAGTGGGCTAAATGTCCCACTTAAAAGACACAGTGTGGTAGATTGGATAAAAAGTCAACATTCAACCATCTATTCTCTTTCTGAGACCCATTTCACATGTAATGATACCCACAGACTCAAAGTAAAAGGATGGAGAAAGGTTTGCCAGGCAAACAGAAAACAAAGAGCAGGATTCACTATTCTTTTATCAGGTAAAACAGACTTTAAGCCAATAAAAATGAAGAAGGATATTGAAGGGTTTTACGTAGTGATAAAGGGTACAATCCAACAAGAAACTTTAACTACCCTTAATATATGTTCACCCAATCTTGGAGTACCCAGATTCATAAAACAAATTCTTCTTTGCTTATGAAAAGACTTAGACAACAAGACAATAATAGTGGTAGACTTCGACACCCCACTGACATCATTACACAGATCACTGAGGCAGAAAATGAACAAAGAAAATGTAGATATAAACTCTACACTTGATCATTTTGACATAGTAGATACCTATAGAAGATTTCACACAACAACTGCAGAATACAGAGTATTTTAATGTGCACTCAGAATAAATTCTAAAAATGATCACATGCTTGGTCATAAAGAAAGTCTCTATAAATACAAAAAGACTAATATACCAAGCACACTGTCAGACCACAGTGCAATGAAAATACAAATCAATATCAAGAAGATCTCTCAAAACTACACAAATACATGAAAATTAAACAACATTCTCCTGAATAAGTAAATATCAAAAGTAAGGAATAAATTGAAAAAATTCTTCAAGTTACAAAAATATGGACACAACTTACCAAAATATCTGAGATGCAGCCAAATCTGTGTTAAAAGGAATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCTTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGTAATCAGGCAGAAGAAGGAAATAAAGGGTATTCAGTTAGGAAAAGAGGAAGTCAAATTGTCCCTACTTGCAGATGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAATCTGATAGGCAACTTCAGCAAAGTCTCAGGATACAAAAATCAATGTTCAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAGCTTACAAGGGACGTGAAGGCCCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAACTACCAATGACTTTCTTCACAGAATTGGAAAAAACGACTTTAAAGTTCATATGGAATCAAAAAAGAGCCCACATTGCCAAGACAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCATGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGCTACCAAAACAGAGACATAGACCAATGGAACAGAACAGAGCCCTCAGAAATAGTGCCGCATATATACAACTACTGATCTTTGACAAACCTGACAAAAACAAGAAATGGGGAAATGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTAAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAACTCAACATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAGCCTAGGCAATATCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCATAAGA	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_6415:HG4_Ill_GATKHCSBGrefine_3187:HG4_PB_pbsv_4555:HG2_Ill_tnscope_480:HG4_10X_allpass_829:HG4_PB_SVrefine2PBcRDovetail_2317:HG4_PB_SVrefine2Falcon1Dovetail_2774:HG4_Ill_SVrefine2DISCOVARDovetail_3461:HG3_PB_SVrefine2Falcon1Dovetail_2797:HG2_PB_SVrefine2PBcRplusDovetail_8125:HG2_PB_SVrefine2PB10Xhap12_3306:HG2_PB_SVrefine2Falcon2Bionano_2179:HG2_PB_SVrefine2Falcon1plusDovetail_8750:HG2_PB_PB10Xdip_22452:HG2_Ill_SVrefine2DISCOVARplusDovetail_9474:HG2_10X_SVrefine210Xhap12_3329:HG4_Ill_MetaSV_3740:HG2_Ill_MetaSV_3566:HG4_PB_assemblyticsfalcon_19061:HG3_PB_assemblyticsfalcon_19427:HG2_PB_assemblyticsfalcon_19484:HG2_PB_assemblyticsPBcR_18846:HG2_PB_pbsv_4535:HG2_10X_allpass_705:HG4_Ill_Krunchall_6659;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3329:HG2_Ill_SVrefine2DISCOVARplusDovetail_9474:HG2_PB_PB10Xdip_22452:HG2_PB_SVrefine2Falcon1plusDovetail_8750:HG2_PB_SVrefine2Falcon2Bionano_2179:HG2_PB_SVrefine2PB10Xhap12_3306:HG2_PB_SVrefine2PBcRplusDovetail_8125:HG3_PB_SVrefine2Falcon1Dovetail_2797:HG4_Ill_SVrefine2DISCOVARDovetail_3461:HG4_PB_SVrefine2Falcon1Dovetail_2774:HG4_PB_SVrefine2PBcRDovetail_2317;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00552396;ClusterMaxSizeDiff=0.00357433;ClusterMaxEditDist=0.0224208;PBcalls=14;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3079;DistBack=0;DistForward=-3080;DistMin=-3080;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:61330107-61333186;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9997;PctRecOverlap=0.9994;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2793.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:59:29:./.:19:0:20:16:./.:0:0:0:0:0/1:64:19:0/1:232:102:2152:.:.
chr4	61569228	HG2_Ill_manta_1265	ATACAGCACACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_313:HG4_PB_assemblyticsfalcon_19063:HG3_PB_assemblyticsfalcon_19430:HG2_PB_assemblyticsfalcon_19487:HG2_PB_assemblyticsPBcR_18850:HG4_Ill_Krunchall_6663:HG3_Ill_Krunchall_6317:HG2_Ill_Krunchall_6416:HG4_Ill_Spiral_363:HG3_Ill_Spiral_4933:HG2_PB_pbsv_4538:HG4_PB_pbsv_4558:HG3_PB_pbsv_4437:HG3_PB_HySA_6969:HG2_PB_HySA_8532:HG3_Ill_MetaSV_3738:HG2_Ill_tnscope_481:HG2_Ill_MetaSV_3567:HG4_PB_SVrefine2PBcRDovetail_2318:HG4_PB_SVrefine2Falcon1Dovetail_2775:HG4_PB_HySA_6799:HG4_Ill_scalpel_4329:HG4_Ill_SVrefine2DISCOVARDovetail_3462:HG4_Ill_MetaSV_3741:HG4_Ill_GATKHCSBGrefine_3188:HG4_10X_allpass_830:HG3_PB_SVrefine2PBcRDovetail_2059:HG3_PB_SVrefine2Falcon1Dovetail_2798:HG3_Ill_scalpel_4507:HG3_Ill_manta_1033:HG3_Ill_SVrefine2DISCOVARDovetail_3477:HG3_Ill_GATKHCSBGrefine_3039:HG3_10X_allpass_871:HG2_PB_SVrefine2PBcRplusDovetail_8126:HG2_PB_SVrefine2PB10Xhap12_3308:HG2_PB_SVrefine2Falcon2Bionano_2180:HG2_Ill_scalpel_4413:HG2_Ill_manta_1265:HG2_Ill_breakscan11_617:HG2_Ill_SVrefine2DISCOVARplusDovetail_9475:HG2_Ill_GATKHCSBGrefine_3048:HG2_10X_allpass_706:HG2_10X_SVrefine210Xhap12_3330;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3330:HG2_10X_allpass_706:HG2_Ill_GATKHCSBGrefine_3048:HG2_Ill_SVrefine2DISCOVARplusDovetail_9475:HG2_Ill_breakscan11_617:HG2_Ill_manta_1265:HG2_Ill_scalpel_4413:HG2_PB_SVrefine2Falcon2Bionano_2180:HG2_PB_SVrefine2PB10Xhap12_3308:HG2_PB_SVrefine2PBcRplusDovetail_8126:HG3_10X_allpass_871:HG3_Ill_GATKHCSBGrefine_3039:HG3_Ill_SVrefine2DISCOVARDovetail_3477:HG3_Ill_manta_1033:HG3_Ill_scalpel_4507:HG3_PB_SVrefine2Falcon1Dovetail_2798:HG3_PB_SVrefine2PBcRDovetail_2059:HG4_10X_allpass_830:HG4_Ill_GATKHCSBGrefine_3188:HG4_Ill_MetaSV_3741:HG4_Ill_SVrefine2DISCOVARDovetail_3462:HG4_Ill_scalpel_4329:HG4_PB_HySA_6799:HG4_PB_SVrefine2Falcon1Dovetail_2775:HG4_PB_SVrefine2PBcRDovetail_2318;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0958269;ClusterMaxSizeDiff=0.0958269;ClusterMaxEditDist=0.0958269;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=23436;DistForward=1325;DistMin=1325;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:61569229-61569574;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2794.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:68:1/1:1:35:2:25:./.:0:0:0:0:1/1:0:40:./.:2:17:.:.:.
chr4	61621927	HG2_Ill_Cortex_6269	ATAGGTCTATTTACCTTAGTTTCAATTACCTGATACAACATATCCAGCTTTCAACAGAAAATTATATTCAGTAAGATAGAACATACTCGGACTGTGGGGAAAAATAAACAAAAACTAAATTTGT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_4559:HG2_PB_HySA_8534:HG4_PB_HySA_6800:HG4_PB_SVrefine2PBcRDovetail_2319:HG4_Ill_svaba_5881:HG4_Ill_scalpel_4330:HG4_Ill_MetaSV_3742:HG4_Ill_GATKHC_7640:HG4_Ill_GATKHCSBGrefine_3189:HG4_Ill_Cortex_2644:HG4_10X_allpass_831:HG2_PB_assemblyticsfalcon_19489:HG2_PB_assemblyticsPBcR_18852:HG2_PB_SVrefine2PBcRplusDovetail_8127:HG2_PB_SVrefine2PB10Xhap12_3309:HG2_Ill_svaba_5769:HG2_Ill_manta_1266:HG2_Ill_breakscan11_618:HG2_Ill_SpiralSDKrefine_12282:HG2_Ill_MetaSV_3568:HG2_Ill_GATKHC_7552:HG2_Ill_GATKHCSBGrefine_3049:HG2_Ill_Cortex_6269:HG2_10X_allpass_707:HG2_10X_SVrefine210Xhap12_3331:HG2_PB_pbsv_4539;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3331:HG2_10X_allpass_707:HG2_Ill_Cortex_6269:HG2_Ill_GATKHCSBGrefine_3049:HG2_Ill_GATKHC_7552:HG2_Ill_MetaSV_3568:HG2_Ill_SpiralSDKrefine_12282:HG2_Ill_breakscan11_618:HG2_Ill_manta_1266:HG2_Ill_svaba_5769:HG2_PB_SVrefine2PB10Xhap12_3309:HG2_PB_SVrefine2PBcRplusDovetail_8127:HG2_PB_assemblyticsPBcR_18852:HG2_PB_assemblyticsfalcon_19489:HG4_10X_allpass_831:HG4_Ill_Cortex_2644:HG4_Ill_GATKHCSBGrefine_3189:HG4_Ill_GATKHC_7640:HG4_Ill_MetaSV_3742:HG4_Ill_scalpel_4330:HG4_Ill_svaba_5881:HG4_PB_SVrefine2PBcRDovetail_2319;NumExactMatchSVs=22;ClusterMaxShiftDist=0.032;ClusterMaxSizeDiff=0.032;ClusterMaxEditDist=0.072;PBcalls=9;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-123;DistBack=38535;DistForward=-123;DistMin=-123;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:61621928-61622051;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:57:45:./.:27:19:26:22:./.:0:0:0:0:0/1:37:12:./.:.:.:.:.:.
chr4	61999376	HG2_10X_SVrefine210Xhap12_3332	ATATTTTCTGCATTAGCAAATATACAATTAAGATGATGATAAAAGAGGGATACTTTAGAATGAGCAATGTCTGAATCTGGTTGAAATTTTCACAGTGCATTCTTCTAACTGAAAGTTACCTAGAGTGTATTTGGGATTAAAGAGAAAAGGAGCATACGTGGTCAGTCATAGTTTCTGGTCAGACCTTGCAAAGTCTTAACAGGCTATACTAAGAAATTTTGTCTTCTGTATGATGAGATTGACATTTTAAGAAGTTTGCTGTGAAGTTGTATGGAGAAGCAATTAAAGGCTGGAGGGTGATTGAAGGAGACATATTAGACAACCACTACAGTATTTCAGGTAGGAGGTGACAACAGTTTGGACCAAGATAGTGGCAGTGGGTGTGGAGATAAGACCATAGATCCTTAGAAGCTAAAACTGATGGAAATTTGAAGACAGATTTGGTGTAAGAGAAGAAAGAGATGCTCAAGATTGTTTCCAAAGCTTTCATTTTATATAGCTGGGTTGCTAGTCCTGCCAGTCGTTGAGATGTGGCTCTTGGGTTACAGGCCAACAGTGTAGGTTGAGATCCCAGTCCAAAGACTGGGCTTAATTTGCTTTTCGTAGAGAGAACTCAGGAAGATTCTACACAAAAAAGAATAAAGTGGCTTTTAATATTAATTCCTTTTTGGCTAAGTTTTCAAAATGCACCTGTATTGCTATCATAACATATGAGAAGTTCATGGGCTGTTCTGGAATTTCCAGATCTATTTTTTTAATCTGAATTGACTAATTAGTCCAGGAAGACAATGATGTTGATTTTTTTCAGAATAACTGACTGTTTATCTGCACTGAGGCTTAGTAATCTTTCCAGAAATGGCAACCAAATCCTATCCATTCCTTGCTATTGTACTTTCTTTTAATGCCCAAAATAAAGTTCAGAAGATTTGTAGACATAGCTAGATAATTATTGCTTGCCGAGGAATCATTAAAAGTTTTCTCAGAGCAAGAAAATAAACTGCATTTTAAATAGTATGCTTTTTAATTATCCTGATGTTGGTGGGTGGGTCCTGTCTTTAAAAGTATCTCCTTTGGAATGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCTATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACCACCCAAGGTAATTTATAGATGCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGGCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGACCAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTTACAATCCTGACAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATATATGGTGCTGGGAAAACTGGATAGCCATATGTAGAAAGCAGAAACTGGATCACTTCCTTACACTTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGAATTCATGTCTAAAACAACAAAAGCAACAGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGTACAGCAAAAGAAACTACCATCAGATTGAACAGGCAACCTACAGAATGGGAGAAAATTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAGCAAACAGCCCCATCAAAAAGTGGGTGAAGGATATAAACAGACACTTCTCAAAAGAAGACATTTATGTAGCCAAAAAACACACGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCGTTAAAAAGTCAGGAAACAACAGCTGCTGGAGAGGATGTGGAGAAATAGGAAAACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCAATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCACATTACTGGGTATATACCCAAAGGATTATAAAGCATGCTGCTATAAAGACACATGCACACGTATGTTTATAGCAGCACTATACACAATAGCAAAGACTTGGAACCAACCTAAATGTCCAACAATAGTCTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGGATGAGTTCATATCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGAAAACTATCGCAA	CAAAATCTACTGTAAGTT	20	PASS	ClusterIDs=HG2_Ill_Krunchall_6426:HG2_PB_pbsv_4543:HG3_PB_pbsv_4442:HG2_Ill_tnscope_482:HG2_PB_assemblyticsfalcon_19492:HG2_PB_assemblyticsPBcR_18856:HG2_PB_SVrefine2PBcRplusDovetail_8129:HG2_PB_SVrefine2PB10Xhap12_3310:HG2_PB_SVrefine2Falcon1plusDovetail_8752:HG2_10X_SVrefine210Xhap12_3332:HG3_Ill_MetaSV_3741:HG2_Ill_MetaSV_3570:HG2_10X_allpass_708:HG3_10X_allpass_873:HG3_Ill_Krunchall_6327;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3332:HG2_PB_SVrefine2Falcon1plusDovetail_8752:HG2_PB_SVrefine2PB10Xhap12_3310:HG2_PB_SVrefine2PBcRplusDovetail_8129:HG2_PB_assemblyticsPBcR_18856:HG2_PB_assemblyticsfalcon_19492;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0077821;ClusterMaxSizeDiff=0.0077821;ClusterMaxEditDist=0.0077821;PBcalls=7;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-2560;DistBack=-1953;DistForward=-2560;DistMin=-2560;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:61999376-62001953;PctSeqSimilarity=0.9403;PctSizeSimilarity=0.9992;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=1;EndDistance=16;GTMatch=0;TruScore=97;MatchId=2796.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:47:35:1|0:0:25:43:0:./.:0:0:0:0:0/1:69:15:0/1:214:90:2689:.:.
chr4	62498727	HG4_PB_SVrefine2PBcRDovetail_2322	TTCATGTATTACTTTATTTGGTCCTTGCAGAACCCTGTGAAGATTATAGACATTATTATTCTATGTAATGAAGGAGTAAACTGCATAATAGAGAAAGTCAATTGCATTGTGTCCTCATATACATAGTGTTGGAGCTGACTATTGGAGCAACTCTAATGCCAATTTTTCTTACTCTCTTATTATTGAAGGTGTAACTTGATAAAACTGTACCTGCGTTGCAGTTTGGGGTTTTAAAGTGTGAGTATTGTTTTGACACACACACTTAGGCTTGACATCATGTATTATTTTATTTGGTCCTGGCAGAACCCTGTGAAGATTATAGACATTGTTATTCTATATAATGAAGGAGTGAACTGCACGTTAGAGAAAGTCAATTGGATTGTGTCCTCATATACATAGTGGGTGTTGGAGCTGACTATTGGAGCAACTCTAATGCCAATTTTTCTTACTCTCTTATTATTGAAGGTGTAACTTGATAAAACTGTACCTGCGTTGCAGTTTGGGGTTTTAAAGTGTGAGTATTGTTTTGACACACACACTTAGGCTTGACA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3333:HG2_PB_pbsv_4544:HG4_PB_pbsv_4562:HG3_PB_pbsv_4443:HG4_Ill_MetaSV_3745:HG2_Ill_MetaSV_3571:HG2_PB_HySA_8547:HG4_PB_SVrefine2PBcRDovetail_2322:HG4_PB_SVrefine2Falcon1Dovetail_2777:HG4_Ill_SVrefine2DISCOVARDovetail_3464:HG3_PB_SVrefine2PBcRDovetail_2061:HG3_PB_SVrefine2Falcon1Dovetail_2800:HG3_Ill_SVrefine2DISCOVARDovetail_3480:HG2_PB_SVrefine2PBcRplusDovetail_8130:HG2_PB_SVrefine2PB10Xhap12_3311:HG2_PB_SVrefine2Falcon2Bionano_2181:HG2_PB_SVrefine2Falcon1plusDovetail_8754:HG2_Ill_SVrefine2DISCOVARplusDovetail_9476;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3333:HG4_PB_SVrefine2PBcRDovetail_2322:HG4_PB_SVrefine2Falcon1Dovetail_2777:HG4_Ill_SVrefine2DISCOVARDovetail_3464:HG3_PB_SVrefine2PBcRDovetail_2061:HG3_PB_SVrefine2Falcon1Dovetail_2800:HG3_Ill_SVrefine2DISCOVARDovetail_3480:HG2_PB_SVrefine2PBcRplusDovetail_8130:HG2_PB_SVrefine2PB10Xhap12_3311:HG2_PB_SVrefine2Falcon2Bionano_2181:HG2_PB_SVrefine2Falcon1plusDovetail_8754:HG2_Ill_SVrefine2DISCOVARplusDovetail_9476;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00903342;ClusterMaxSizeDiff=0.00903342;ClusterMaxEditDist=0.0253394;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-550;DistBack=30904;DistForward=-378;DistMin=-378;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=556;REFWIDENED=4:62498728-62499833;PctSeqSimilarity=0.9492;PctSizeSimilarity=0.9928;PctRecOverlap=0.7676;SizeDiff=-4;StartDistance=-125;EndDistance=-129;GTMatch=0;TruScore=90;MatchId=2797.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:62:1/1:0:16:7:28:./.:0:0:0:0:0/1:41:5:0/1:33:5:.:.:.
chr4	63301185	HG2_PB_SVrefine2Falcon2Bionano_2182	TATAATTCTCTAATGATCACTGGTATTGAGTTTTTTTTTTATGTGCTTGTTGGCTGAAAGTATGTCTTTTTATGAGAAGTGTCTGTTCATGTCATTTGCCCACTTTTTAATGTAGTTATTTTTCTCTTGTAAAACTAAGTTACTTATAGATGCTGGATATTAGATCTTTGTTGAATGCATAGTTTGCAAATATTTTCTCTCATTCTAGAGGATGCCTGTTTACTCTGTTGATACTTTCTTTTGCAGTGCAGAAGCTCTTAAGTTTAATTATATCCCATTTGTCAATTTTTGCTTTTGTTGCAATTGTTTTTCATGTTTTTGTCATGAAATCTTTGCCCAGTCTTATGTCCAGGATGGTATTTCCTAGGTTGTCTTCCAGGGATTTTATAGTTTTGGGTTTTGCATTTAAGTCTTTAATCCATCTTGAGTTGATTTTTGTGTATGTTGTAAGGAAGGGGTCTAAGTTCAGTCTTCTGCATATGGCTTGTGAGTTATC	ATGCCAATCATG	20	PASS	ClusterIDs=HG2_10X_allpass_709:HG4_PB_pbsv_4564:HG2_PB_pbsv_4548:HG2_Ill_tnscope_483:HG2_Ill_SpiralSDKrefine_12294:HG4_Ill_manta_1114:HG2_PB_assemblyticsfalcon_19503:HG2_PB_assemblyticsPBcR_18866:HG2_PB_SVrefine2PBcRplusDovetail_8132:HG2_PB_SVrefine2Falcon2Bionano_2182:HG2_PB_SVrefine2Falcon1plusDovetail_8757:HG2_Ill_manta_1267:HG4_PB_SVrefine2PBcRDovetail_2323:HG4_Ill_MetaSV_3746:HG4_Ill_Krunchall_6679:HG2_Ill_Krunchall_6440:HG4_10X_allpass_833;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_manta_1267:HG2_PB_SVrefine2Falcon1plusDovetail_8757:HG2_PB_SVrefine2Falcon2Bionano_2182:HG2_PB_SVrefine2PBcRplusDovetail_8132:HG2_PB_assemblyticsPBcR_18866:HG2_PB_assemblyticsfalcon_19503:HG4_Ill_manta_1114;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0285132;ClusterMaxSizeDiff=0.0285132;ClusterMaxEditDist=0.0285132;PBcalls=8;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-484;DistBack=0;DistForward=25406;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:63301185-63301680;PctSeqSimilarity=0.9504;PctSizeSimilarity=0.9979;PctRecOverlap=0.9798;SizeDiff=-1;StartDistance=-7;EndDistance=3;GTMatch=0;TruScore=97;MatchId=2798.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:19:0|1:31:1:0:17:./.:0:0:0:0:0/1:51:18:0/1:43:14:.:.:.
chr4	63478271	HG3_Ill_Krunchall_6339	TATATATGTATATGCAATATACATACATATATGTATATGCAATATACATAC	T	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_6321:HG3_Ill_Krunchall_6339:HG3_Ill_250bpfermikitraw_6123:HG2_Ill_Krunchall_6443;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6321:HG3_Ill_Krunchall_6339:HG3_Ill_250bpfermikitraw_6123:HG2_Ill_Krunchall_6443;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-50;DistBack=-1;DistForward=-18;DistMin=-18;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=398;REFWIDENED=4:63478272-63478719;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2799.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:45:0|1:24:5:3:36:./.:0:0:0:0:0/1:20:9:./.:.:.:.:.:.
chr4	64134308	HG2_PB_SVrefine2Falcon1plusDovetail_8759	TGTATTTAGTAGAGGTGCAATAAATTATTTTTTCTATTATGTGCTATATATGTTTCAGAGAATTTAAGAAGTATAGATCCCACTTTAAAATCATATATAGTATATTATAACTTAGTATTGTAGTAAGAGAAGTACATCTATATATTATTATATATATTATTATGTGATAAGTCTTATGAAAAAGGCATGAAAACTACATGATATAAGTGAATGTCAAAGAAGCTCGTAATCTGGATTAGAAAGAGTCATATAAAGTCTTCCTAGCTTAGGAGAAGCTTAACTATTATGATAAAATAAATGAAGTGCAATCAATAAAAATGAAGTGTCAGGGGAAGGAACATATTTATGGAAGAGTTGGTTGGGTCAAGAGGAAGAAAGTAGAGAGATAAACAAGACCAGATACTAAAAGACCTTATAGGTGATGTGATGTCCAACATTATCGTAAATATTATAGCAACTCACTAAATCATTTCTAAGAAGGATAGTTACTCTAGACAATTTTGAGTTTTAAGATCTTGACTTTCAAAGAGGTGTCAAAAAGAATTGTTAACTGGTGATTGGAAGTGGTAGCTAAGAACAACAGGAAGAAGCTTATTAATTTAGCTGAGGAAGTATTAGTGTCCCTCAAGCTAGTCTGAGATTATGTTACTAGAATTCCCTGGCCTTGTGACTTTGAAATTTCTTCCATTTAAGCCAGTGAAGTATACTTTCCTTGGTAATTGATACTGAGGTTGGTCATAGGACTTGCTTTGGTCAAGGAAATGTAAGAAAGACAACAATGTGCTAGTTTATTCTCAGTCGCTTAAGTGATGTCACAGATTTTCACTAGCCTTCATGTGGTTCTTCCATCCACCATAAGAAGATCATGTGCCAGCAAGATACTCAATCTAGACTGAAGAATATGTTAAACAGACCTGAATCCAACCAGCACTGTGGAATCAAATCCTACAGATCCCAGCTAAGAAGATAAGAAACACATCATCTGAAGGTTTTTCAGTGAGAAATATTTGTTTTTGTGTGTGTGTTTTTAAGTACTTGCAGCTTTTTCTAGATTCAGGGGATACATGTGCAGGTGTCTTCCGTGGTTATATTGCAAGATGCTGAGGTTTGGAGTATGGATCCTGTCACCCAGGTCATGAGCATATTATTTGATAGGCATTAAGTTGCTGCAAAAGTAATTGCAGTAAAAACCACAATTACTTTTGCACCAACCTAATAGTTTTTAACCCACACCTCTCTACCTACTTCCCCACTGTAGTAGTCCCCAGTATCTAGCTTCTCCATTTTTATGTCCATGGGCTCCCAGTGTTTAGCTCCCACTTGTGAGAACAAGCAGCATTTTGTTGTTGTTGTTTCTGCATTAATTCACTTAGCATAATGGCATCCAGCTGCATCCATGTAAAGGACATGATTTTCTTCTTTTCTATGGCTGTGTAGTGTTTCATTAGGCATATGTACATTTTCCCTATCCAATGCAGCATCGATGAGCACCTATGTTGATTTCATGTCTTTGCTATTTTGAACAGTGCTGCAATGAGCATACAAATACACGTATCCTTTGGTAAAACAATTTATTTTCCTTAAGTATATACCCAATAATGTGATTCCTGGGTCAAATGGTGGTTCTAAGTTGTTTAAGAAATCTTCAAATTGCTTTCAATATTGGCTGAATTAATTTATATTCACACTAGCAGTATAGAAGTGTTCCTTTTTCTCTGCAGCCTCACCAGCACTTGTTATTTTTTGGCATTTTAATTATAGCCATTCTGCCTGCTGTGAGATGGTGTCTCCTTGTGGTTTTTATTTGCACTTCTCTGGTGATCAGTGATGGTGAGGAATTTTTCATATGTGTCTTGGCCACTTGTATGTATTCTATTGAGAATTGTCTGTTCATGTCCTTTGTTCATTTTTTAATCAGGTTATTTGCTTTTGCCAGTTTATTTCTTTAATTTCTTATAAATTCTGGATATTAGACCTTTGTCAAATGCATTTTGAATTTTTTCCCATTCTGTAGGCTGTGTGTTTACTCTGTTGATAGTTTCTTTTGTTGTGTAGACACTCTTTAGTTTAATCAAGCCTTACTTGTCAATTTTTGGTGTTGTAGCAATTGCTTTTGAAGACTTAGCCAAAAATTATTTGCCAAGGCCAATTTCAAGAATGATATTTCCTAGGTTTTCTAGTAGAATTTGTGTAGGTCTTATATTTAAATCTTTAATACAACTTGAGTTAATTTTTGTATGTGGTGAAAAATAGGGGTTCAGTTTGATTTTCTGTATATGGCTAGCCAGTTTTCTCAGCACCGTATATTGATTAGGGGAGTTCATTTCCCATTTCTTCTTTTTATCAGCTTTGTCAAAGTTAATATGATTGTAGGTATGAAGCTTCATTTCTTGGTTCTATATTCTGTTCCATTGGTCTACATGTCTGTTTTTGTAATACTATGCTGTTTTGGTTATGGTAGCCTTGTAGTATAGTTTGAAGTCAGATAATGTGATGCGTTTGGCTTTGTTCTTTTTGCTTAGGATTGCTTTGGTTATTCAGGTTGTGTTTTTGTTTCATGCAAATTTAGAATAGGTTTTTCCAATTCTGTGAAAAATTAGACATTGATAGTTTGATAGGAATTACATTGAATCTGTAAATTGTTTTGTGCAGTATGGCTATTTTAATGATTTTGATTCTTCCTATCCATGGGCATGGAATGCTTTTCCATTTGTGTCATCTCTGATTTCTTTCAGCAATGTATTGTAGTTCTCTTTGTAGAGGTCTTTTACATCCTTGGTTAGCTGTATTTCTATGCATTTCAATTTTTTGTGTGTAGCTATTTTAAATAATATTGTATTCTTGATTTGATTCTCATGTTGAATGTTATTGGTGTATAGAAATGTTGCTGATTTTTATACACTGATCTTGTATCCTGGAATTTTACTGAAGTTGTTTATCAATTTTAGGAGACTTTTGGTGGAGTCTTTAGGATTTTCTAGTTATAGAAGCGTATCAGAGAAGAGAAAGGTTTTGACTTCTTTATTTTCTATTTGGATGCCTTTCATTTCTTTCTCTTGCCTGATTCCTCTGGCAAGGGTTTTTAGTACTATATTGAAATGGAGTGATGAGAGTGGGCATACTTGTCTTGTTCCAGTTCTCAAGGAGAATGGTTCTAGCTTTTGCCCATTCAGTATCATGTTGGTTGTGGGTTTGTCACAGATGGCCCTCATTATTTTGAGATATGTTCCTTCAAATGCCTAATCTGTTGAGGGTTTTTTATCATGAGGGAATATGGGATTTTACAGAAACACTTTTCAGCATCTATGGAAGTGATCATGTAGTTTTGTATTTAATTCTGTTTATGTGTCAAATCACATTTGCATATATTGAACCAGCCTTGCATCCCAGGAATAAAGCTTACTTGATTGTGGTGTTATTAACTTTTTGATATGCCTCTGAATTCAGTTTACTAGTGTTTTGTTGAGGATTTTTGCATCTGTTTTGATCAGGACAATTGACCTGATATGTTCTTTTTATGTTGTCTCTTTGCGGGCTTTTGGTATAAGGATGATGCTGCCTTCATAGAATGAGTTAGGGAGGAGCACCTCCTCCATTTTTTGGAATAGTTTCAACATGATTAGTATCAGTTCTTCTGTATATGTCTGGTATAATCTACTACTACTGTGAATCTATCTGGTTCAGGGCTTTTTTGGGTTGGTAGGTTTTTTTTATTATTTATTCAGTTTCAGAACTTGTTACATGTCTGTTCAGGTTTTCATTCTCTGTCTATTTCAATCTTAGAAGGCTTTGTGTTTCCAGAAATTTAGATACTTCCTCTAAAGTTTATAATCTGTGTGCATGGAGGTGTTCATAATAGTCTTTAAGATCCTTTGTACTTCTGTGGGACCTGTTGTAATGTTATCCTTGTCATTTCTTATTTGGATTTTCCTTTATTTCTTTGCTAATCTAGCTAGTGGTCTATAAATCTTGTTTATGGTTCCAAAAATACAGCTCTTAAATGGCATAGTTTTGTTCATTTTTATTTTTTTTATTGGCTGAACCCTAAGGAAACCAAAGGTAGAGAAGGAAACACTTCATAAATATTTTTTTATGATGGTAGAATTGACAAGACAGATGTCTAATTGGAAATGGGTTACATGGGTGAAAGCAAGGCCAATTTTCATTCTCAGATTTCTGGCTTCAACAATTGAGTATAGAAAAAGAGTGCTACTGAGTGATATGTAATAATGTTACATAAACTGATGCCCTCCCTTTAATCCATATTTAATCTTCATCTCTATAATTGTACCACTTATTTGCTATTTCACTTTTGTTTTTTAAATACATTTTAATCTCAAGATATTCATATTTTTCTGGCCTTTCCCTTCAAAATAAATTCGGAATCATTGCCATGATGCAGAGATGTCACAGTATCTATATAAATAATACTGACCATAAGGAAACTACCAAATGAAGTTATATTATAATTAGTCTATGCTCAATACCTACTAGAGAGGAGATATTGAAAAATATTTGATACCTTCATGAATAAATGAATAACATTTGTGTGAAAGGGAAGATTAGAGAGATGAGCTTAAGATTACATATTATAAATTGAGAAAAATTAATATTTATATTTATAGTATTGATTTGGAAATTTTCAAAATGAAATGCACAGAATCATATATTTATTTAAATATATGTACAAATGTGTTTAATTTTTCAAACTAATTTATTACAAGCAATATGTAAAATAAATTTTAAAATTTTAAAAATGAGATTTTAATTGAAATATTTGTGCAAAACGTGTTACACAGAGATTATAAATTACAAAAATCATAACTAAGATAATGTGATGCAACAAATTATGTTTAATTTAACTTGTTATTTTACCATTGAATGGCCATTTAAAAATCTCTTAACAAGGTACTTTTGCAAAATATCATTCATAATTAATTGCAATTTATAAGCAAATCTTCTTCAAATAATCCCTAAACCATAACTTGCTTGAAGTTTTAAAGTAAACTCTGATTATCTGTTTGTGTGTGTGTGTGTGACTGTATGAATCACATAGTCAAAAAATATTATAAAGGAACATAATTCAAACCCAAAGAACCACTTTTAATGTCTTACCGCTAAAACTAAAAAATTGCTTAGGCAATGTATTTGTTCACTTTCATATATGTATTAAGCATCAACTATTACACCAGAGAAGGTCTAAAAACACCAGGGATATAGAGGCTCCTATGTTCAAATAATTCACATTATTTAGGAAGGAGTAAGAGGCAAAATTAAAATAAATAATGTATAATGCAATGCTAAAATGTGCAAACTCGTAAATTTTCTGGCGATTAGATGAGATTTAGTTCAGCTAACTTAAGTATGTTTTTGTTGTTATTTGATTTGTTTATTTATTTCCCTTGGTCCAAGATCTCTGGGCGTCTTTCTATAGTGGGGTGATGCCCTCAATAAAAGTATAAGAGAGAACAGAAATGAAGATGAATTTTTAAAGTCATCATAAATTTGTTTGTGAATGTAAACAATAATTTAATATAGAGACAAATTACAAGAATAGATAAATGCAAATAAAACACTCTGTTATAGACATCTTGATCTTCTTAACCATGTTTGTAACTAATTCACACAAACCGCTTTGGCATATGAAGCACATAATAGAGTCATCTCTTATATAATCATTCCCAATGCACACAGATACTTGTATCCAAATTATTAGCAATTTGATTCTAATGTAAATCAATCATAAGCAATCAGTCAGAATGTAATAATAAATAGTTGTAACGATAGTCTGTTCATTAAATGGAAAAATACTAGTGTGATTCATAAGTGTGTGTTTGTGTTGCCGTGTATATAACTATTATAATGATCAATGTGGAAAGCATATTTTTAATGGTTAGTCAATTCAAAGAGAAAATTTTAGTATAGTATGCTGTAGTTAAGTAGTGAAATTTATATATAATTATCAGATATTTTATGTGGTAAAAGTATTGCATACTGAAGCTCTTAATAGTATTTGCATCATTTGAACAATGACTATAAGATGTAATTTGTTGTAAATATATTCAAAATTATCATGGAGCATCATGTTTAGGTAAAATCTGACATTGTATCTTCTAAATTTTTAGCAGAGGGAGACAAGATGGCTGGGAAGACACAGCCCAGAAGAACATCTTCCACCAGTGGGCTGGGATACTGAGAAGGCTGGCACTCTCATAGTAGATATACAGAGGGAAGGCATTGAGAATGGAGGGAGGGAGGTTGCAAACAATGGACTGAAAGAAGCTAGGAACACTGTGAGGGATTGCCCAGCATAGGCACCCACTCCTGGCCACCAGTGACTCTTAGGGAAGGGGCGAACTGAACAGATGGGAGTGGCCAGCTTTTGCTATGGACCTCCAGACTCTTAGCTGCAAAAGACCCCACGACCTCCACAGACACTTGAGCTGGCAGGAAGAGCTGCCTAGAAAGGTAGCACCAGCAGGATTCCAGCCTATACACAGCCCAGAGGGTTTGGCACAGGAATGGCTGCAGTAGAGCGTGGCAACACACCCATTCCCCAAGGCTCCCCAAGCTCCTATAGGTGACTTTAGCCTTTTGAGGGTTGTTGGACTTGGACAATCAGGGCACTCTTGCCCATGGGACAAGGCCAGTACAATTTGAGAGCATCCCCCTTTGTCTGCCGCCCCAGCCTGGCCATGCCTATGGCATTGTAGCCTTGGATGAATAACCTGGGGGGTCTTCATCTTAGTTCTATTGTTGGCAGACCACACCTAACCATTGGAGAGCTGCAGCACAGCATCCACCTTTGATGTGACCAGCAGGTCACAGCCTTCCCCACTGTAGCCTCCCCCTTCCACTTGTCTGATACATACTTACCCATGGGCATTTCCAACAACCACTTTGACAGTACATGCATGTGGGTGATTTCGTCTATCCTCTGATAATGGCACATATGTGTGTGTACACCCCACCATTCTCTCAAGCCCGCCAGTGTGCAGTGCCACTATGTGGGCATGCCATCCCTGCTGTGGCACAAGTGCTGCTCACAGATGTCAGAATCCTTCTTGCTGGTGCCCCACCCCCGTCATGCTGCTGCCATTTCTGGCACAAGTGCAGCATGGATACCAGCACACTCACCCCTGCTGGTGCCCTGCCCCAACTGCACCACCACACAAGTGTGTGGAGAGATGCTGGTGCCTCCATTGCCACCTCACAACTGCTGGTGCCCAACCAAACCATTGCTGCCAGCCTGGATGTATGCAAAAACACCTCTGACCTTCTCTGGTTTTTCCACCCCAGCGGATGCATGTGGAACCTGCTACCTGCTGTGGCTACTGGCACGTGTGAGTGAGCACAGATCCCATTGCCATGACCTAAATGAAGTGCTTTGGCTGGCACCTTCCATTGGATTTTTGGGGCCAGCAGACCAGGAACACCTTGGTTCCTCCATTGCAGCACGTTCTAACTTCAAGAGGTGAAAGAACAAAGCTGGGAGACCTGTACCAGCTCTCCAGAGTTACAGCACACAGCCCAGAAGGGCTAAGCTGAGCCTTAGCCCCCTGAAATTTTCCAGAATTGAATCCAATCAACTTAATCTAACCTATACCACAATAAAACACCTAAGGGCATCAAAAAAGATCAAAGTAATAAAACCCTTCCAAATGACACCAACTTCAAAGATTAAATAAACATCAGTCCACACAGATGGGAAAAAAAATAGTGCAAGAATTCTGGCAACTCAAAAGCCAGAGTATCTTCTTACCTTCTCACAAGCACACTGGTTCCCCAGCAATGTTTCTTAACAAATCTGAAATGGCTTAAATTACAGACATACAATTCAGAATCTAGATAAAATTTTCAAGATTCAAGAGAGAGTTGAAACCCAATCCAAGGAAATTAAGAATTACAATAAAATAATACAGAAGCTGAAAGTTGAACTGACAGAGCTGAAAAACACACTACAATAATTTCATAATACAATTGCAAGTATTAACTGCAGAATAGACCAAAATGAGGCGAGAATCTCAGAGCTCAAAGACTGATTCTCTAAATTAACTCAGTGAGATAAAAAGTAAGAAAAAATAGTAATAAGGAATGAACAAAACCTTCAAGAAATATGAGATTATTTAAGGAGACCAAATCTGTGACTCATTGACATCCTTGAAAGAGAGGGAGAGAAAGCAAGCAACTTGAAAAACATATTTGAGGATATCATCCATGAAAATTTCCCCAACCTTACTAGAGAGGCCAACATTTAATTTCAGGAAGTACAGAGAACTCCTGTTAGACACTATGGAAAATGCCGATCCCCAAGACACATAGTGATCAGATTCTCCAAGGCTAAGATGAACAAAAATATATTAAAGGCTGCTAGAGAGAAGTGGTAGGTCACCTAGAAAGGGAACCTAATCAGGCTAACAGCAGACCTTCCATCAGACACCCTGCAAGCCAAAAGAGATTGAGGGACTATATACAGCATTCTTAAAAAAAAAAAAAAGAAACTCCAACCATGAACTTCACGTCCAGTCAAACTAAACTTCATAAGCAAAGGAGAAATAAGATCCTTTTCAGAGAAGCAAATGCTAAGGGCATTCATTACCACCAGACCTGTCATATAAGAGATCCTTAAATGAGTGCTAAATATGGAAACAAAAGACTATTACTGGACACCACAAAAACACACTTAAGCACATAGGCCAGTGACACTATGAAGCACCTGCACAATCAAACCTGCATAATAACCAGTTAACTACATGATAACAGGATCAAATCTGAACATATCAATAGTAACTTCAAATGTAAAGAGGCTAAATGCCCCAAATTAAAAAAGCACAGAATGGCAAGTTAGATAAAGAAGCAAGACTCAGCAGCATATTGTCTACAGAAGACCCATCTCACATATAATGACATTTATAGGCTGAAAGTAAATACAGACTTCAACTCAACAATGATTGAAAACAGACAAGGGAATTACATAATGACAGCAAGTTCAATTAAATAAGAGACCTATCTATCCTAAATATATATTCACCCAATACAGGAGAACCCAGATAAATAAAACAAGTTCTTAGAGACCTATGAAGAGACTTAGATGACCTCACAATAATAGTGGGAGATTTCAACACCTCACTGACAGTATTAGACACATCATCGAGACAGAAGGCTAACAATAATATTCATGACTTAAGCTTGACACTTGATCAAATAGACCTAACAGACATATAGGACTTTCCACCCCAAAACAACAGAATATACAGTCTTTTAATCTGTAAATGGCACATACTTTAAAATTGACCACTCAATTGGCCATCAGGTCATTCTCAGCAAATTAAAAAAAAATTATACCAACCACTGTCTTGGACCACTGCACAATGAAAATAGAAATCAATATTAAGAACATCATGCAAAACAACACACTTATATGGAAATTAAATGACCTGCTCCTGACAGACTTCTGAGTAAACAATGAAATTAAAGCAGAAATAAAGGAATTCTCTGAAACTAATGAGAATAAAGATAGAGCATATCACAGTCTCTGGGACAAAGCCAAAGCGGTGTTAAAAGGAAAGTTTATAGCACTAAATGCCCACATTAAAAGTTAGAAAGATCTCAAATTAACAACCTAACATCACACCTTGAGGAACTAGGAAAGCAAGAACAAACCAACTCCAATGCTAGCAGAAGACAGGAGATAACCACAATCAGGACTGAACTGAATGAAAAATATAAGGCAAAATAATACAAAAGATCAACAAAACCAGAAGTTGTTTCTTTTTGAAAAAGAGAATACAATTGATAGACCACTAGCTAGACTAACAAAGATAAAAGAGAGAAAATCCAAATAAACACAATCAGAAGTGACAAAGGGGACATTACCACTGACCCCACAGAAATGCAAAAAAAACCCTCTGAGACTATTACAAACATGTCTATGCACACAAACTTAAGAACCTACCAGAAATAGAATAATTCCTGAAAACATACAATTTCCCATGATTGAACCAAGAAGGAAATGAAACCATGAACAGACCAATAATGAGTTCCAAAATTGAATCAGTAATAAAAAGCCTATCATTCTGTAAAAGTCCAGGACCATATAGATTCACAGCCAAATTATATTTGACACCAAAGAAGAGTTGATACCCTTCCTACTGAAAGTATTTGAAAAAATTGTGCAAGATGGACTTACCCCAACTCGTTCTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGATGAAAAAAAAAAAAAAGGAAAAGAAAACTTCAGGCCAATATCATTGATGAATATAGTTGCAAAAATCCTCAACAAAATACTAGCAAACAAAATCTAGCAGCACATTGAGAAGCTAATACACCACAGTCAAGTGCGTTTTATCCCCAGGATGCAAGGTTGGTTCAACATATGCAAATCAATAAATGCAATTCATCACATAAACAGAACCAATAACAAACACCAGATGATAATCTCAATAGATGCAGTAAAGGCTTTCAATAAAATTTAATATTTCTTCATGTTAGAAAACCTCAACAAACTAAACACTACACGAACATATCTCAAAATAATAACAGCTATCTATGACAAACCCACAGGTAACATACGGCTCGTACTGAATGAGCAAAAGTTGGAAGTATTCCCATCATGAACCAGAATCAGACATGAATGCTCACTCTCACCACTCCTTTTCAACGTAGTATTGGAAGCCCTAGCTAGAGCAATCAGGAAAGGGAAAGAAATAAAAGACATCCAAATAGGAAGAGAGAAATTAACACTATCTCTGTTTGCAGATGATGTGATTATAGACCTAGAAAGCCCCACAATTTCTATCCAAAAGCTCCTAGATCTGATTACTTTAGCAAGTTTTAGGTAGTAATATCAATGTACAAATATCAGTAGGATTTCCATACACTAACAATGTCCATGCTGAATAACAAATCAAGAACACAATACCATTTACAGAAGCCACAAAAATAATAAAATACTTAGGAATACAGCTAACCAAGGAGGTGAAATATCTCTCCAACAAGAGTTACAAAATACTGCTGAAAGACTTCAGAAATGAAACAAATGGAAAACCATCCTGTTCTCATGGATAGGAAGAATCAATATTCTTAAAATAGCCATACAGCCAAAGCAATTTACAGATTCAATGCAATTCCTATTAAACTACCAAGACATTTTAACAGAATTAGAAAAATAAAGGATTCTTAAATTAATATGGAACAAAAAAGAGGGTGAATTGCCAAAGCAAGCCTAAGCAAAAAGAACAAAGATGGAAGCATCACTTTGCCCTACTTCAAACTACACTACAGGGTCACAGTATCCAAAATAGCATTGTACTGGTACAAAAACAGACACATAGGCTAATGAAACATAATACAGAACCCAGAAATAAAACTATACACCTACAACCTACTGATCTTTGAAAAAGTTGACAAAAACAAACAATGTGTAATGGAGTCCCTATTTAATAAATGGTGCTGGGATAACTGGCTAGCCATAGCAGAAGATTAAAACTGGACCCCTTCTCTACAAGATATAACAACACAACTCAAGATGTATTAAAGACTTAAATGTAAAACATAAAACTATAAAATCCCTTGAAGTAAACCTAGGAAATGCTATTCTGCACATTGGCCCTGGCAAAGATTTTATGATGGATGTGCCAAAATTAATTGCAAGAGAAACAAAAATTTACAAAGGGGACCTAATTATACTAAAGAGCTTTTTCACTGCAAACGAAACTATCAATGGGGTAAACAGACAACTCACAGAGTAAGAGAAAATATTTTCTAAGTACGCACCTGACAAAGGTCTAATATCCAGCATCTATAAGAAACTTAAACAAATTTATAAGAAAAAAAACCTCATTAAAAAGTGGGCAAAGGAAATGAACAAAGACTTCTTAAAGGAGGACATATATGGGGCCAACAAACCTGTGAAAACATATTCAACATCACTTGAGTTGGGTTTTTAATCATTAGAGAGATGTAAATCAAAACCACATTGAGATAACATCTCACATCAGTCAGAATGGCTATTATTAAAAACGTCAAAAAATAACAGATGCTGTTGAGATTCTGTAGAAAAGGGAACACTTCTACACTACTGGTAGGAATGTAAATTAGTTTATTCTCTGTGGAAAGCAGTTTGGTTATTTCTCAAAGAATAAACAGAACCACCTTTTGACCCAGCAATCCCATTAATGGGTATACACCCAAAGGAATATAAATCATTCTGCCATAAAGATACATGCACATGTGTGTTCATCACAGCAATATTCACAATGGCAAAGACATGGAATTAACCTAAATGCCCAACAACGGCAGATGTGGTAGATATCTCCATGGAATACTACACAGCCAAAAATGTACAAGATCATGATCTTTGTAGCAACATGGATGGAGCTGGAGGCCATTATCCTAAGTGAACTAATGCAGGAATGGAAAACCAAATACCACATGTTCTCATTAATATGTGGGTGGTAAACACTGAGTAGACATGGACTCAAAGAAGGGGACAACAGACATTGGGGCCTACGTGAGGCTGAAATGTGGGAAGGAGGGTGCAGTTTGAAAAAATACCTGTCTGGTATTATGGTTATTACCTGAGCAATGAAATAACCTGTACACCAAACTACCATGACACGCAAATTACCTATGTAACAAACCTGCACATGTAATCCTGAAACTAAAATAAAAGTTTAGAGTCTACTTATATTTATACTATAAGTGGACTCTAAAAATTGAAAACAGGTAAAACATTATATGCACTTAGTATGAGTATGCACTTAGTTTAAAAATATATCTCAGTGTTTTACTTCAAAACTCATCTATACAAAATCAACTATCTATATTACAGGAAATAAAAAAGTAAATAGGCTTCAATTACCAAATGGCAATTTAAGTAAATCAGTTAATAGGGTACACATATTGCCAAGTCAAACTTGACAAACATGTTTTGAAGTTTGCTCATTAGTTATAAAATTTTCACAGGTTGCAGTAAGGTTGCTCATTAAAAAATATTACTTTCTAAAATAAACCAGTAGTTCATTAAAAATCTAATCTCTTTTAAAATATATCATTTAGTAATTTATTGAACAATATATAATTAGGTTGGTTTTAGAAACATTCAGTATATCAATAAGCTTTTCATTATTACAGTTTATTCACAGTTTTAAAGTAGGTTTCATCAAAGTATAATAAAATTAGGCATATAGTTCTATGAGTGTAACCACCTTCACAATCAAGATATAGAACATTTCATCACCCCAAATAATGTCCTCATGCTCCTTAGCAGTGAATCAACTCCATCTGTATCCAGTCCTAATTAAATTTCAGTCTCCAAGCTTTCGCCTTTTCCAAATATCAAATAAATGGAATCATTCAGCCTGTAGCCTTTTGGGTCCATCTTTTTTTGAACAGTATTATGTTTCTGAGTTTCATCCATATTGCTGTATGTATCAGTAGTTTGATCATAATGGTAAAGCTTTAATTTAATTTCTAAGGTTTGTCCCCTATGGGAAAGATTTCTGGGAATCTCTTTCTGAAAAACTTGTTCTTAGAAACAATCCTGAAAGTATCATGAGCATTACATTTTTCTTCTGTGGGCCCAAGAATGCCAACTGAGATTCAGAGAGGTTAATTTCTCCAAATAAAATAAAATTATTGCTACTTGTAAAGAGTTATTATATCCACATAATAATCCGTTAAACATCATTCACTTATATGTGCATACAGATCATAAAAGACTATACAATTTATAACAGGTTTACCAAACACATCAAAATCTAGGTATACATTGAAGTAATGACTTGAAATTGAGTAATGGATCCTCCTGGTTCCACTCCTTTTTTATTTGAGTTGGATTTTGTGGATTTACATTCTTTGCACTTCTTAGCAATACTTTCCGGATGTCATTTTCCTTCCTGGAGATTTACTTAGTTATATATTTCTGCAGAGATTGGCTATTAAAACTGGTATTCCTTCGGCATATATTTTAGGACTTATTTTTCCTTTGGAATTGTTATCCACTCCTTCTTGGCTTCATTTGACATCCATATATCATGGCTGTATAACCAAAATAATTTCACAATATAAATATCCAGCCTAGTATCTCTCTTGTGTTTAAAACACATATATAAAATAATTTACTAAAATACACAATTAGATACCTAGCAGGAAATTAAAATTTCTATATGTCCAAAGATAAACTTACTATCTCCTCTTTACTTTTTAACCTCATATGTTTCCAATCTCAATGTATGACACTAAACAATGCCGAGCTTCTTTAGACAGAAACCTGGGATTTGCATTTGATTGTTTCTTGTCCCTTCAACGAATCTAACTCAGTTACCATGCCCTGGCTTGATAACTCTTTCTCCTGCATATCTCTACTTCCTTAGTTTTTCTTCTTTTCCACCCTCACTTTCCTTAGTCCATGACACTATATACTTTAATCTTACTTTAGTATCATCATAAATGGTTTCCTGCTTCCTTGCATCTTTGCTCCATTATGTCTTTATCACATTAGAATATTAATGGTATTTCAGAAATGACACTTTATTCATTCAATTTATCTGTGGAAAATTCATCGCTCTAGGAAAATTCAGACTTATGTAGCAAATGAAAAAAATGTCTTTTCCTGCCCATCATTAGGTTCATGGCTGAGGCCTCTATAAAAAAGAGAGGTTAACAAGAAAAAAACATAGAAATATATCTATTTTAAGTTTTCTATAACAGGGAAAATCTTAAAAGAAGATACAAAAAAATAGGTAAACTTCTGTGTTTTTATGCTTAAATTTGATGAAAAGGTGTATAATTGTGGAGACATATAATTGGACAAAGGAGGGATGATCTAAATGTGGAAGGAATTTATTAAGGCCTTTTTGTTCAGATTTTTCTCTATATTTCTCTGTCTTCATAAAAGGATCTTCCTTTCCTCTGGGTATAGGGAAAATACCTCTCAAATTAGGGTCTTATGACCTGCTTCAGAGTAGAAGAACTAGGAGAACATGAGAGAGGTCTTCCTGCTTGTGCTGTTTTCTCAAATAACAAGGTAGCATGCTCTAAACCCTCTAATGTCTACATTTTATGGTGCATCAGCGATCATCTCTGTGGTTTCATCTTTCTGCAAATATCCCTCATCTTCTATATTTAAATTTTAGCAGAGAAAGCCTCATCTATTGGCCTTCACTTATGTTGTTCTCTCTACCTCAGACAGTAATTCTTTATACATCTAGCTAATTTTCACTTTCTTCTAAAGGTGAAGCTTGAATATTACCTTTATAAATTAAAATTTGCCTGATTCTCCTATAGTACATTAGGTATTTTTGCAATATTTTTGTCTTCGTTTTCTATAGCTGTTGAAACAAACCACAAGTTAGTGACTTAAAGCCACCAATTTATTACTTTAAATTCTGTAGAAATCAGAAACAGGACTCACTAAATTAAGGTGTCAATAAGGCTGAAATTCTTTCTGGAGGCTCTAGGATTGTACCAGACTTTCTTGCCTTTCCCAGCTTCCGGAGGCTACTGCTATTCCTTGACTTGTAAACTCTTTCCTTCATCTTCAAACCAGCAAAATTGCCTCTCTCAGAGTTCTCTTCCATGGTCACATCTTACTTTGCTCACAATTGGGAAAAAAATCTCTGATTTTAAGAACCTATGTAATTAGATTGATCCCACTTATGGTATTCAGGATAATCCACCCATCTCAAGGTTCTTAATCACATCTCGAGAGTTCTTTTTAGTCATGTAAGATAATGTATTCACAGGTTTCAGAAATTAGGACACTAGAACTAGGAGATTATGACATGGATATCTTTGGGGAGAGCCATTATCCTGCCCACAACAGTTCCCATTTTACCTTCAATTCTCCCTTCTATGCACCAACAAATAGTATTACAATCTTTATTTAATATCTGTAGTTTCGATTATATTTTTTTTTGAGGCGGAGTCTTGCTCTGTTGCCCAGGCTGGAATGCAGTGGCAAGATCTCCACTCAGTGCAACGTCTGCCTCCCGGGTTCAAGCAATTCTCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGATGCCCGTCACCACGTCCGGTTAATTTCTGTATTTTTAGTAGAGACAGGATTTCTCCACGTTGGCAAGGCTAGTCTCAAACTCCTGACTTCAAGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCCGGCCCGATTAGATTATTATATAAAGTATAATATTTAAATTCTTTGGTTCCTATTCCCTAGAAAATTTGGAGTTCCTCTTAAGTATGTTTCAACTAAAGCAATGAGTACCCAGGATCTGGATGAAACTTGAGATTGCAAAGGAAATAAAGTGGAATGTAGTACAAAAGCTACCTTACTTTATTTGTAGCTAGAAGAAACATTATTCTCTTTAATCTTTGCCTAGAAACTGCTATTTTTTTAGAACTATGTGTAATAACAATTATTGAAGGAACTTCATATTATTTGAGTTATTCTTTAGATGAGTTAATGTCTGGCAAGTTATAGTCTTTTTTCTCAACAAGCAATATTATATTTATATTTAGTGAAAACTTATTTCACTTTTAAAATATTTATTTTAAATATATTATTATGATTGTTATTTTTAAAAATAATTTTCATATATCTTCATAAGTAATTTCATGGAAAATAAGAAATGAGACAATCATTAGTGGCTGGTAAAATAGCTCTGCTTCTAATCTGAAATAAATTGTTTTCTCTTATTTTTGTGAGGTATATTCATTAGTATTTTAATTTTTTAAATAAAATTCATATCAAAATGGTTGTATGTACTTTGATCATCTTTGATTCAGATACATTGCTCACTTTCCTTTTGTTATTCTATTTCATAACGTAGAGTCTTAGCCTCCGGCTCCCACATCCTCATGTATAGATTCAATTTGGATTTAAACAATGGGTAGTATTGGAGAAGACTTAAAAAGCAAGATACAAAGAAGGGAAAAATCAGCATATTTGTCTCTCACTTTCTGCCCTTAGCGGTGTCTGGCTCAAACAGTGGATACACGTGTCTTCCATGGTTCCATATACCATCAGGTACCTACCATTTTTTTTTGTTCCCAGCTTTATTTATGATTTAATCACTAACTGATGGTCGGGTTTTCATCATTTTAATCAGATTATTGCATTGACTTCTTTCTTTGAACTAGTCATAATTGTTTTTGTTTTTCTGTTTAGGCTCTGACATATATTAGGACTAGTTGATTTATACAAATGTATTTAAACATCTCTAAACATAAAGCAACTTCGTTTGTGCACACTTTTAAAACAGTTCTGAATAACAGATAACCTCTTATTTCAACAAGCATATTTTTAAACATTGTTTTACTTGGAGAGGACAAATGAGCAATGTAAAATATTAAAAATATAGATGAACTATTTAATTACATAATTATAAGATCAAACATATTAATGTGTACATATTTAAAATATGCAGTACAAAAATATATTTACACTGAAATATTTTTGTTTATACTCTCATTTCATGAAATGTTTTCAGTTAAAATTTTTAATATACATCTTTCACATTAGTGATTTTGTCATTATTAAAGATGCATTTTGGGAATACTGATTTTTTTTATAATGCAGCATCCTCATGTAGTGTAATTGTTTGAGGTAGGTTTTTTTTTTGCCTTGGGATGATGGGCATTTAATCCCATGCCACAAAAAGATATTTGCATAAAATTTTGGCAGACATCTTTCCTCTTATTCTGCTGGTGTGTGACTATAATTCAGCCACATTTTTTAAGGCTTTTGAAATGATTTGTAATAAAATACAACTCTTGCATTTTATGTTCATATTATTATGAATACTTATTTAATTTGTATTGTAACTGCAGACTTTCCATTATAAAAATTGCAACAGGTGTTCTTAGCAAGCAATCAACTCAAGCAATTCACTTATAAAGGAAAGAGATTAAAAAATGAGATCTATTGACTCATCTTCAAATAGAACTTGGGTGATTTATTTTATTTATGTAATTTTTTCCCGCTTCATAAGGGTATACCTGATAAAAAAAAGTTGTATAGATTTAAGGTATACAACATGATGATTTTACATGTTATACATGTGTGAACACATATTCGTAAGTATATAATATATACAGTGAAATGATTACCACAGTCTAGTTGCCTTTTTTCTTTTGTGTTGAGAACACTTAAGATCTACTTTATTAGCATATTTTAAGTATATAATACAGTATTTTTAACTATAGTCATCATGGTGTACATTAGATCCCCATAACTTATTCATTTTGTAAGTAAAATTTTGTACTCTTTAGCTAACATTTCTCTATTTTCCCCACTTCCCAGTCCCTGGAAACAACCATTCTACTCTTGCTTTCTGTGAGCTCAACACTTTTAGGTTTCACATATATAGTGATATCATACAGTATTCGTCTTTTTCTGTCTGACTGCTTTCACTTAGCATAATGCACTCAAGTTTCACCTATATTGTCCCAAATGGCAGAAATTTATTTTTTATGTCAAAATAATATTACATTTTACCTATTCATCCAGCTAGTTAATGTATTTAGCCAACAGACATTTAGGTTATCTTCATATCTTGTCTATTATGAATAATGCTGCAATAAAAATGGGAGTTCAGATATCTCTTCAATGTCCTGATTTTGTTTTCTTTGAATATATACCCTAAAGTGGGATATTTTTAATTTTTTGAATAACCTCCATGCTGTTTTCCATAATGGCTGTAATCAATTTACATTCCCACCAATAGTGTAGAAGCGTTCCCTCTTCTTCACATCTTTGCTACTTGTATCTTTTAACATTTTTGTAATAAACATTCTATCAGATGTAATTAAAATTTAAACTATTAATTCAAATAAGGTTTATTTCTCTTATAATTCTATTAGTGGAAAAGAATAAAAAAGAGAACTAATAGCATGATTCAGTTATGTATTTAAGGCATTGATTTATTATTTTATGTGTTATATTAACAGAAAACTTACATTTACTGTGTATAACATGATGTTTTCCATTATATACACATTGTGAAATGACTAAATCTGTCTTTTTACCCTATGTATTATCTCACATAGCTGTTGCTTTTGTAGTGAGTACTCTTTACATACCCTCTCTTAGCACTTTTCAAGAATACAATATATTACTAATAATGGTCCCCAAGATGTACAATTGATCTCTTGAACCTATTGTTTCTGTTTGCTACTTTGTATTCATTGACCAATATGTCTACACTCCCCTCAATCATCCCGGCCTTTGGTAACTACCATTCTACTCTCCACCTCTTTGAGATTAACTTTCTTACATTCTACATATGAGTGATATCCTGTGGTATTTGTCTTACTATCCCTGGCTTATTTCACTTAACATAATGTCTTCCTAGGATCATCCATGTTGTCACAAATGACAAGATTTCATTCTTTTTAAGGCTGAAAGTGGTATATATAACACATGTTCCTCATTCATCCATTGATGGACACTTAGATGTACTCCATATCTTGGCTATTGTAAGCAATGCTGCAATAAACATGTGAGTGCAGCTGTCTCTTTGCATACTGATTCTATTTCTTTTTAATATATACCCAATAGTGAAATTGCTGGGTTATATGGTAGTTCTGTTCTTGTTTTTGAAGAACCTCCATACTGTTTTTCATAATGGCTACACCAATTTATATCACCACCAACATGCAAGTGCTGTCTTTTCTCTACACGCTTGATAAAGCTTGTTATATTTTGTCTTTTTTATAATAGCCATTCTAGTAGATGTTAGGTTATAGCTCATTGTGGTTTTAATTTGCATTTCACTGATAATTAGTAATGTTGAGGATTTTTCATATACCTGTTGACCATTTGTATGTCTTCTTTTGAGAAATGTCTATTAAGATTATTTGCCCAGATATATTATAGAATAATTTTGTTCTCACTTCTTAAACATTGGCTCATTTATTCACTTTCATGTGTCTTTAATCAGCTATTCTGTATACTTATCTATACAAACACAAGTTCTATCTTTTCCTAATACATTCCCTTTCTATGGCTATTAATTTGATTGTATCTGTTTATTGTAACATCGTATTAAATGTTTTAATGTTTTACTTTACTTCATATGAATGTGCATTCACATACATACAAACACAAAATAATTCATCACTTTAACAAGCACGTTCCATGTCCAGATGTCATTCTC	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3744:HG3_10X_allpass_875:HG3_PB_pbsv_4449:HG2_PB_pbsv_4552:HG4_PB_SVrefine2Falcon1Dovetail_2780:HG3_PB_SVrefine2PBcRDovetail_2063:HG3_PB_SVrefine2Falcon1Dovetail_2805:HG2_PB_SVrefine2PBcRplusDovetail_8135:HG2_PB_SVrefine2PB10Xhap12_3314:HG2_PB_SVrefine2Falcon1plusDovetail_8759:HG2_Ill_tnscope_484:HG2_Ill_Krunchall_6451:HG2_Ill_MetaSV_3574:HG2_10X_allpass_710;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8759:HG2_PB_SVrefine2PB10Xhap12_3314:HG2_PB_SVrefine2PBcRplusDovetail_8135:HG3_PB_SVrefine2Falcon1Dovetail_2805:HG3_PB_SVrefine2PBcRDovetail_2063:HG4_PB_SVrefine2Falcon1Dovetail_2780;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0064071;ClusterMaxSizeDiff=0.0064071;ClusterMaxEditDist=0.0064071;PBcalls=8;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=-20228;DistBack=13689;DistForward=-20228;DistMin=-20228;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:64134309-64154536;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2801.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:65:59:./.:26:5:10:19:./.:0:0:0:0:0/1:55:30:0/1:389:219:20220:.:.
chr4	64783584	HG2_PB_pbsv_4557	TAAGGCCAATATCTTTTTTTTTTTTTTTTAAAGGCAAAAGTACCATTTTTATTTTTTTTTTTTTTATTTTTTATTTTTTTTTTTTAAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAAGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAGTGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGTTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGAGGCTGGCCGGGCGGGGGGCTGACCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCAGCTGGCCGGGCGGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGCCCCCCCACCTCCCTCCCGGACGGGGCGGCTG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_620:HG2_10X_allpass_712:HG4_PB_assemblyticsfalcon_19091:HG2_PB_assemblyticsfalcon_19526:HG2_PB_assemblyticsPBcR_18885:HG3_PB_assemblyticsfalcon_19470:HG4_Ill_Krunchall_6700:HG3_Ill_Krunchall_6353:HG2_Ill_Krunchall_6460:HG3_Ill_Spiral_4959:HG4_PB_pbsv_4579:HG3_PB_pbsv_4456:HG2_Ill_tnscope_485:HG4_PB_SVrefine2PBcRDovetail_2328:HG4_PB_SVrefine2Falcon1Dovetail_2783:HG4_Ill_manta_1119:HG4_Ill_SVrefine2DISCOVARDovetail_3478:HG4_Ill_MetaSV_3751:HG4_Ill_GATKHCSBGrefine_3205:HG4_10X_allpass_837:HG3_PB_SVrefine2PBcRDovetail_2066:HG3_PB_SVrefine2Falcon1Dovetail_2809:HG3_Ill_manta_1035:HG3_Ill_SVrefine2DISCOVARDovetail_3492:HG3_Ill_MetaSV_3747:HG3_Ill_GATKHCSBGrefine_3054:HG3_10X_allpass_876:HG2_PB_pbsv_4557:HG2_PB_SVrefine2PBcRplusDovetail_8138:HG2_PB_SVrefine2PB10Xhap12_3317:HG2_PB_SVrefine2Falcon2Bionano_2185:HG2_PB_SVrefine2Falcon1plusDovetail_8762:HG2_Ill_manta_1270:HG2_Ill_SpiralSDKrefine_12302:HG2_Ill_SVrefine2DISCOVARplusDovetail_9485:HG2_Ill_MetaSV_3575:HG2_Ill_GATKHCSBGrefine_3059:HG2_10X_SVrefine210Xhap12_3341:HG4_Ill_Spiral_366:HG2_Ill_Spiral_314;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3341:HG2_Ill_GATKHCSBGrefine_3059:HG2_Ill_MetaSV_3575:HG2_Ill_SVrefine2DISCOVARplusDovetail_9485:HG2_Ill_SpiralSDKrefine_12302:HG2_Ill_manta_1270:HG2_PB_SVrefine2Falcon1plusDovetail_8762:HG2_PB_SVrefine2Falcon2Bionano_2185:HG2_PB_SVrefine2PB10Xhap12_3317:HG2_PB_SVrefine2PBcRplusDovetail_8138:HG2_PB_pbsv_4557:HG3_10X_allpass_876:HG3_Ill_GATKHCSBGrefine_3054:HG3_Ill_MetaSV_3747:HG3_Ill_SVrefine2DISCOVARDovetail_3492:HG3_Ill_manta_1035:HG3_PB_SVrefine2Falcon1Dovetail_2809:HG3_PB_SVrefine2PBcRDovetail_2066:HG4_10X_allpass_837:HG4_Ill_GATKHCSBGrefine_3205:HG4_Ill_MetaSV_3751:HG4_Ill_SVrefine2DISCOVARDovetail_3478:HG4_Ill_manta_1119:HG4_PB_SVrefine2Falcon1Dovetail_2783:HG4_PB_SVrefine2PBcRDovetail_2328;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0279938;ClusterMaxSizeDiff=0.0279938;ClusterMaxEditDist=0.0279938;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-970;DistBack=54692;DistForward=12155;DistMin=12155;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:64783585-64784568;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:66:./.:0:0:0:4:./.:0:0:0:0:1/1:0:47:1/1:2:62:1039:.:.
chr4	65700403	HG4_Ill_Krunchall_6707	ATATATACACATATACACATATATCTACATATATATCTACATATGTGTATATATACACATATATATC	A	10	PASS	ClusterIDs=HG2_Ill_svaba_5808:HG4_Ill_svaba_5921:HG4_Ill_manta_1120:HG4_Ill_Krunchall_6707:HG4_Ill_250bpfermikitraw_6395:HG4_Ill_150bpfermikitraw_6103;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_svaba_5808:HG4_Ill_svaba_5921:HG4_Ill_manta_1120:HG4_Ill_Krunchall_6707:HG4_Ill_250bpfermikitraw_6395:HG4_Ill_150bpfermikitraw_6103;NumExactMatchSVs=6;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=-66;DistBack=-67;DistForward=-43;DistMin=-67;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:65700402-65700472;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2803.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:14:./.:24:4:4:9:./.:0:0:0:0:0/0:41:2:./.:.:.:.:.:.
chr4	66364655	HG2_Ill_manta_1273	TATATTATTCCCTTAGTTAACTTCATTTCCAACATCAACAGGATTTTCTTGTAGCATCGCCTCTTATTCAAACTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3346:HG4_PB_pbsv_4589:HG3_PB_pbsv_4465:HG2_PB_pbsv_4564:HG3_PB_HySA_7031:HG4_PB_HySA_6851:HG2_PB_HySA_8596:HG4_Ill_svaba_5932:HG4_Ill_manta_1123:HG4_Ill_Krunchall_6720:HG4_Ill_GATKHCSBGrefine_3218:HG4_Ill_250bpfermikitraw_6409:HG4_Ill_150bpfermikitraw_6116:HG4_10X_allpass_838:HG3_Ill_svaba_5930:HG3_Ill_manta_1038:HG3_Ill_Krunchall_6368:HG3_Ill_GATKHCSBGrefine_3059:HG3_Ill_250bpfermikitraw_6154:HG3_Ill_150bpfermikitraw_5964:HG3_10X_allpass_880:HG2_Ill_svaba_5822:HG2_Ill_manta_1273:HG2_Ill_SpiralSDKrefine_12313:HG2_Ill_GATKHCSBGrefine_3071:HG2_Ill_250bpfermikitraw_6358:HG2_Ill_150bpfermikitraw_5906:HG4_PB_SVrefine2PBcRDovetail_2332:HG4_PB_SVrefine2Falcon1Dovetail_2788:HG4_Ill_SVrefine2DISCOVARDovetail_3483:HG3_PB_SVrefine2PBcRDovetail_2069:HG3_PB_SVrefine2Falcon1Dovetail_2815:HG3_Ill_SVrefine2DISCOVARDovetail_3501:HG2_PB_SVrefine2PBcRplusDovetail_8142:HG2_PB_SVrefine2PB10Xhap12_3323:HG2_PB_SVrefine2Falcon2Bionano_2189:HG2_PB_SVrefine2Falcon1plusDovetail_8767:HG2_Ill_SVrefine2DISCOVARplusDovetail_9490;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5906:HG2_Ill_250bpfermikitraw_6358:HG2_Ill_GATKHCSBGrefine_3071:HG2_Ill_SpiralSDKrefine_12313:HG2_Ill_manta_1273:HG2_Ill_svaba_5822:HG3_10X_allpass_880:HG3_Ill_150bpfermikitraw_5964:HG3_Ill_250bpfermikitraw_6154:HG3_Ill_GATKHCSBGrefine_3059:HG3_Ill_Krunchall_6368:HG3_Ill_manta_1038:HG3_Ill_svaba_5930:HG4_10X_allpass_838:HG4_Ill_150bpfermikitraw_6116:HG4_Ill_250bpfermikitraw_6409:HG4_Ill_GATKHCSBGrefine_3218:HG4_Ill_Krunchall_6720:HG4_Ill_manta_1123:HG4_Ill_svaba_5932;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0397351;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.0397351;PBcalls=14;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-74;DistBack=12945;DistForward=-15;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=68;REFWIDENED=4:66364649-66364790;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2804.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:./.:0:1:0:5:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr4	66641109	HG2_10X_allpass_715	TTAAAATAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGAACACTTGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAAAAAAAAAAAAAAAAAAAAAAACGAAAAGTGATCCAAAAAAAAAATAAATAAAAAAAAAAATAAATAAAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3578:HG2_PB_HySA_8599:HG3_PB_HySA_7036:HG4_PB_assemblyticsfalcon_19107:HG3_PB_assemblyticsfalcon_19486:HG2_PB_assemblyticsfalcon_19545:HG2_PB_assemblyticsPBcR_18905:HG4_Ill_Krunchall_6724:HG3_Ill_Krunchall_6375:HG2_Ill_Krunchall_6482:HG4_PB_pbsv_4594:HG4_PB_SVrefine2PBcRDovetail_2335:HG4_PB_SVrefine2Falcon1Dovetail_2791:HG4_Ill_scalpel_4368:HG4_Ill_manta_1127:HG4_Ill_SVrefine2DISCOVARDovetail_3484:HG4_Ill_GATKHCSBGrefine_3221:HG4_10X_allpass_839:HG3_PB_pbsv_4469:HG3_PB_SVrefine2PBcRDovetail_2071:HG3_PB_SVrefine2Falcon1Dovetail_2818:HG3_Ill_scalpel_4549:HG3_Ill_manta_1041:HG3_Ill_SVrefine2DISCOVARDovetail_3503:HG3_Ill_GATKHCSBGrefine_3062:HG3_10X_allpass_881:HG2_PB_pbsv_4568:HG2_PB_SVrefine2PBcRplusDovetail_8144:HG2_PB_SVrefine2PB10Xhap12_3325:HG2_PB_SVrefine2Falcon2Bionano_2191:HG2_PB_SVrefine2Falcon1plusDovetail_8769:HG2_Ill_scalpel_4454:HG2_Ill_manta_1275:HG2_Ill_SpiralSDKrefine_12316:HG2_Ill_SVrefine2DISCOVARplusDovetail_9491:HG2_Ill_GATKHCSBGrefine_3073:HG2_10X_allpass_715:HG2_10X_SVrefine210Xhap12_3348:HG4_Ill_MetaSV_3756:HG3_Ill_MetaSV_3751:HG2_Ill_tnscope_486;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3348:HG2_10X_allpass_715:HG2_Ill_GATKHCSBGrefine_3073:HG2_Ill_SVrefine2DISCOVARplusDovetail_9491:HG2_Ill_SpiralSDKrefine_12316:HG2_Ill_manta_1275:HG2_Ill_scalpel_4454:HG2_PB_SVrefine2Falcon1plusDovetail_8769:HG2_PB_SVrefine2Falcon2Bionano_2191:HG2_PB_SVrefine2PB10Xhap12_3325:HG2_PB_SVrefine2PBcRplusDovetail_8144:HG2_PB_pbsv_4568:HG3_10X_allpass_881:HG3_Ill_GATKHCSBGrefine_3062:HG3_Ill_SVrefine2DISCOVARDovetail_3503:HG3_Ill_manta_1041:HG3_Ill_scalpel_4549:HG3_PB_SVrefine2Falcon1Dovetail_2818:HG3_PB_SVrefine2PBcRDovetail_2071:HG3_PB_pbsv_4469:HG4_10X_allpass_839:HG4_Ill_GATKHCSBGrefine_3221:HG4_Ill_SVrefine2DISCOVARDovetail_3484:HG4_Ill_manta_1127:HG4_Ill_scalpel_4368:HG4_PB_SVrefine2Falcon1Dovetail_2791:HG4_PB_SVrefine2PBcRDovetail_2335:HG4_PB_pbsv_4594;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0678514;ClusterMaxSizeDiff=0.0678514;ClusterMaxEditDist=0.0710824;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=-411;DistForward=5873;DistMin=-411;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=4:66641110-66641429;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2805.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:0:9:0:5:./.:0:0:0:0:1/1:0:51:./.:2:12:.:.:.
chr4	67117695	HG4_Ill_SVrefine2DISCOVARDovetail_3485	AAATTTATAGATTATGAGAGGCAAATAATTGAGTTGACATGTCTAGACTGATGACAAAATTAATGTTAGTTCAGTATTTTAAAACAAATAGTAGAGTATATTTTAATACATATATTTTTTA	TG	20	PASS	ClusterIDs=HG2_PB_HySA_8606:HG4_Ill_GATKHC_7701:HG2_Ill_GATKHC_7629:HG2_Ill_GATKHCSBGrefine_3075:HG4_PB_assemblyticsfalcon_19112:HG4_PB_SVrefine2Falcon1Dovetail_2795:HG4_Ill_manta_1129:HG4_Ill_SVrefine2DISCOVARDovetail_3485:HG3_PB_assemblyticsfalcon_19490:HG3_PB_SVrefine2Falcon1Dovetail_2821:HG2_PB_SVrefine2PB10Xhap12_3328:HG2_Ill_SVrefine2DISCOVARplusDovetail_9492:HG4_Ill_Spiral_370:HG2_Ill_Spiral_316:HG2_Ill_SpiralSDKrefine_12322:HG4_PB_pbsv_4598:HG4_Ill_Krunchall_6730:HG2_PB_assemblyticsPBcR_18912:HG2_PB_SVrefine2PBcRplusDovetail_8146:HG2_PB_SVrefine2PB10Xhap12_3327:HG2_PB_PB10Xdip_22505:HG4_Ill_svaba_5939:HG4_10X_allpass_841:HG2_PB_pbsv_4570:HG2_PB_SVrefine2Falcon1plusDovetail_8771:HG2_Ill_svaba_5831:HG2_Ill_scalpel_4458:HG2_Ill_MetaSV_3580:HG2_10X_allpass_717:HG4_Ill_MetaSV_3759;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9492:HG2_PB_SVrefine2PB10Xhap12_3328:HG3_PB_SVrefine2Falcon1Dovetail_2821:HG3_PB_assemblyticsfalcon_19490:HG4_Ill_SVrefine2DISCOVARDovetail_3485:HG4_Ill_manta_1129:HG4_PB_SVrefine2Falcon1Dovetail_2795:HG4_PB_assemblyticsfalcon_19112;NumExactMatchSVs=8;ClusterMaxShiftDist=0.188034;ClusterMaxSizeDiff=0.188034;ClusterMaxEditDist=0.188034;PBcalls=13;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-119;DistBack=836;DistForward=-121;DistMin=-121;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:67117695-67117815;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9421;SizeDiff=0;StartDistance=6;EndDistance=7;GTMatch=0;TruScore=97;MatchId=2806.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:34:0|1:37:0:1:34:./.:0:0:0:0:0/1:27:23:./.:.:.:1383:.:.
chr4	67122069	HG3_PB_assemblyticsfalcon_19491	TTTTCAAAGGGAATCCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGTTCTTATTATTTTGAGATATGTCCCATCAATACCTAATATATTGAGCGTTTTTATCATGAACGGTTATTGAATTTTGTCAAAGGCCTTTTCTGCATCTATTGAGACAATCATGTGGTTTTCGTCATTGTTTCTGTTTATATGCTGGATTACATTTATTGATTTGTGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGATGGATGATCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGTAATTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCTGGCTTTGGTATAAGGATGATACTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTATCAGTTCCTCCTTGTACCTCTCGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTGGGTTGGGAAGCTATCTATTACTGCCACAATTTCAGAGCCTGTTGTTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGGGTGTTTGTGTCGAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGGGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGATGGTGATTTCCCCTTTATCATTTTTATTGCATCTATTTGATTCTTCTCTCTTTTCTTCTTTATTAGTCTTGCTAGCAGTCTATTGATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTAATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTGGGTATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGTGTCCCAGAGATTCTGGTATGTTGTGTCTTTGTTCTCGTTGGTTTCAAAGAGCATCTTTATTTCTGCCTTCATTTCATTATGTACCCAGTAGTCATTCAGGAGCAGAGTGTTCAGTTTCCATGTAGTTGAGGGGTTTTGAGTGAGTTTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGACAGTTTGTTATAATTTCTGTTCTTTTACATTTTCTGAGGAGTGCTTTACTTCCAAGTATGTGGTCAATTTTGGAATAGGTATGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAG	AGACCATCC	20	PASS	ClusterIDs=HG2_Ill_Krunchall_6489:HG2_Ill_tnscope_487:HG4_PB_assemblyticsfalcon_19113:HG4_PB_SVrefine2PBcRDovetail_2339:HG4_PB_SVrefine2Falcon1Dovetail_2796:HG3_PB_assemblyticsfalcon_19491:HG3_PB_SVrefine2Falcon1Dovetail_2822:HG2_PB_assemblyticsPBcR_18913:HG2_PB_SVrefine2PBcRplusDovetail_8147:HG2_PB_SVrefine2Falcon1plusDovetail_8772:HG2_PB_HySA_8607:HG4_10X_allpass_842:HG2_Ill_MetaSV_3581:HG2_10X_allpass_718:HG4_Ill_MetaSV_3760:HG4_PB_pbsv_4599:HG4_Ill_Krunchall_6731:HG2_PB_pbsv_4571;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8772:HG2_PB_SVrefine2PBcRplusDovetail_8147:HG2_PB_assemblyticsPBcR_18913:HG3_PB_SVrefine2Falcon1Dovetail_2822:HG3_PB_assemblyticsfalcon_19491:HG4_PB_SVrefine2Falcon1Dovetail_2796:HG4_PB_SVrefine2PBcRDovetail_2339:HG4_PB_assemblyticsfalcon_19113;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00774921;ClusterMaxSizeDiff=0.00774921;ClusterMaxEditDist=0.00774921;PBcalls=11;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-1414;DistBack=-370;DistForward=-1052;DistMin=-1052;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:67122069-67123491;PctSeqSimilarity=0.9369;PctSizeSimilarity=0.9951;PctRecOverlap=0.9986;SizeDiff=-7;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=97;MatchId=2807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:32:0|1:29:0:0:26:./.:0:0:0:0:0/1:61:18:0/1:94:51:1383:.:.
chr4	68873177	HG4_Ill_scalpel_4383	ACTAGAGTAGCCAAAACAATTTCGGTAGAGGAGAATAAAGTGGGATAAATCATTTTTACTAATGTTAAGG	A	20	PASS	ClusterIDs=HG2_10X_allpass_719:HG2_PB_pbsv_4575:HG4_PB_pbsv_4605:HG2_Ill_SpiralSDKrefine_12326:HG4_Ill_svaba_5955:HG4_Ill_scalpel_4383:HG4_Ill_manta_1131:HG4_Ill_Krunchall_6746:HG4_Ill_GATKHC_7714:HG4_Ill_GATKHCSBGrefine_3226:HG4_Ill_Cortex_2656:HG4_Ill_250bpfermikitraw_6431:HG4_CG_vcfBeta_3033:HG4_10X_allpass_843:HG2_Ill_svaba_5842:HG2_Ill_scalpel_4470:HG2_Ill_manta_1276:HG2_Ill_Krunchall_6500:HG2_Ill_GATKHC_7642:HG2_Ill_GATKHCSBGrefine_3078:HG2_Ill_Cortex_6299:HG2_Ill_250bpfermikitraw_6379:HG2_Ill_150bpfermikitraw_5930:HG2_CG_vcfBeta_2699;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_719:HG4_Ill_svaba_5955:HG4_Ill_scalpel_4383:HG4_Ill_manta_1131:HG4_Ill_Krunchall_6746:HG4_Ill_GATKHC_7714:HG4_Ill_GATKHCSBGrefine_3226:HG4_Ill_Cortex_2656:HG4_Ill_250bpfermikitraw_6431:HG4_CG_vcfBeta_3033:HG4_10X_allpass_843:HG2_Ill_svaba_5842:HG2_Ill_scalpel_4470:HG2_Ill_manta_1276:HG2_Ill_Krunchall_6500:HG2_Ill_GATKHC_7642:HG2_Ill_GATKHCSBGrefine_3078:HG2_Ill_Cortex_6299:HG2_Ill_250bpfermikitraw_6379:HG2_Ill_150bpfermikitraw_5930:HG2_CG_vcfBeta_2699;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0143885;ClusterMaxSizeDiff=0.0143885;ClusterMaxEditDist=0.028777;PBcalls=2;Illcalls=18;TenXcalls=2;CGcalls=2;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=2;HG2count=13;HG3count=0;HG4count=11;NumTechs=4;NumTechsExact=3;SVLEN=-69;DistBack=13892;DistForward=36303;DistMin=13892;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:68873178-68873248;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2808.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:./.:8:12:21:10:./.:0:0:0:0:0/1:39:10:./.:.:.:.:.:.
chr4	69036892	HG2_10X_SVrefine210Xhap12_3353	TCCAGAAAAAGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCAACACGCCCGGCTAATTTTTTGTATTTTTAGTAGAAACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTAGGATTACAGGCACGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3353:HG4_PB_assemblyticsfalcon_19125:HG3_PB_assemblyticsfalcon_19506:HG2_PB_assemblyticsfalcon_19561:HG2_PB_assemblyticsPBcR_18925:HG4_Ill_Krunchall_6747:HG3_Ill_Krunchall_6394:HG2_Ill_Krunchall_6501:HG4_PB_pbsv_4606:HG3_PB_pbsv_4476:HG4_Ill_MetaSV_3762:HG3_Ill_MetaSV_3753:HG2_Ill_tnscope_488:HG2_Ill_MetaSV_3582:HG4_PB_SVrefine2PBcRDovetail_2342:HG4_PB_SVrefine2Falcon1Dovetail_2800:HG4_Ill_scalpel_4386:HG4_Ill_manta_1132:HG4_Ill_SVrefine2DISCOVARDovetail_3491:HG4_Ill_GATKHCSBGrefine_3227:HG4_10X_allpass_844:HG3_PB_SVrefine2PBcRDovetail_2075:HG3_PB_SVrefine2Falcon1Dovetail_2826:HG3_PB_HySA_7060:HG3_Ill_scalpel_4562:HG3_Ill_manta_1042:HG3_Ill_SVrefine2DISCOVARDovetail_3513:HG3_Ill_GATKHCSBGrefine_3065:HG3_10X_allpass_882:HG2_PB_pbsv_4577:HG2_PB_SVrefine2PBcRplusDovetail_8151:HG2_PB_SVrefine2PB10Xhap12_3332:HG2_PB_SVrefine2Falcon2Bionano_2195:HG2_PB_SVrefine2Falcon1plusDovetail_8775:HG2_PB_HySA_8622:HG2_Ill_scalpel_4472:HG2_Ill_manta_1277:HG2_Ill_SVrefine2DISCOVARplusDovetail_9496:HG2_Ill_GATKHCSBGrefine_3079:HG2_10X_allpass_720;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3353:HG4_PB_SVrefine2PBcRDovetail_2342:HG4_PB_SVrefine2Falcon1Dovetail_2800:HG4_Ill_scalpel_4386:HG4_Ill_manta_1132:HG4_Ill_SVrefine2DISCOVARDovetail_3491:HG4_Ill_GATKHCSBGrefine_3227:HG4_10X_allpass_844:HG3_PB_SVrefine2PBcRDovetail_2075:HG3_PB_SVrefine2Falcon1Dovetail_2826:HG3_PB_HySA_7060:HG3_Ill_scalpel_4562:HG3_Ill_manta_1042:HG3_Ill_SVrefine2DISCOVARDovetail_3513:HG3_Ill_GATKHCSBGrefine_3065:HG3_10X_allpass_882:HG2_PB_pbsv_4577:HG2_PB_SVrefine2PBcRplusDovetail_8151:HG2_PB_SVrefine2PB10Xhap12_3332:HG2_PB_SVrefine2Falcon2Bionano_2195:HG2_PB_SVrefine2Falcon1plusDovetail_8775:HG2_PB_HySA_8622:HG2_Ill_scalpel_4472:HG2_Ill_manta_1277:HG2_Ill_SVrefine2DISCOVARplusDovetail_9496:HG2_Ill_GATKHCSBGrefine_3079:HG2_10X_allpass_720;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0920635;ClusterMaxSizeDiff=0.0920635;ClusterMaxEditDist=0.0920635;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=36463;DistForward=25813;DistMin=25813;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:69036893-69037228;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:1/1:0:27:0:23:./.:0:0:0:0:1/1:0:43:0/1:3:12:.:.:.
chr4	69959841	HG2_PB_SVrefine2PBcRplusDovetail_8156	TGGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_372:HG2_PB_SVrefine2PB10Xhap12_3337:HG2_PB_assemblyticsPBcR_18937:HG2_PB_PB10Xdip_22546:HG4_Ill_Krunchall_6753:HG2_Ill_Krunchall_6509:HG3_PB_assemblyticsfalcon_19521:HG2_PB_assemblyticsfalcon_19574:HG3_PB_SVrefine2Falcon1Dovetail_2829:HG2_PB_HySA_8632:HG2_Ill_tnscope_490:HG2_Ill_MetaSV_3584:HG4_PB_pbsv_4615:HG4_Ill_scalpel_4392:HG4_Ill_manta_1136:HG4_Ill_SVrefine2DISCOVARDovetail_3497:HG4_Ill_MetaSV_3766:HG4_Ill_GATKHCSBGrefine_3235:HG4_10X_allpass_847:HG2_PB_pbsv_4584:HG2_PB_SVrefine2PBcRplusDovetail_8156:HG2_PB_SVrefine2PB10Xhap12_3336:HG2_PB_SVrefine2Falcon2Bionano_2201:HG2_PB_SVrefine2Falcon1plusDovetail_8781:HG2_Ill_scalpel_4485:HG2_Ill_manta_1282:HG2_Ill_breakscan11_624:HG2_Ill_SVrefine2DISCOVARplusDovetail_9503:HG2_Ill_GATKHCSBGrefine_3086:HG2_10X_allpass_723:HG2_10X_SVrefine210Xhap12_3358;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3358:HG2_10X_allpass_723:HG2_Ill_GATKHCSBGrefine_3086:HG2_Ill_SVrefine2DISCOVARplusDovetail_9503:HG2_Ill_breakscan11_624:HG2_Ill_manta_1282:HG2_Ill_scalpel_4485:HG2_PB_SVrefine2Falcon1plusDovetail_8781:HG2_PB_SVrefine2Falcon2Bionano_2201:HG2_PB_SVrefine2PB10Xhap12_3336:HG2_PB_SVrefine2PBcRplusDovetail_8156:HG2_PB_pbsv_4584:HG4_10X_allpass_847:HG4_Ill_GATKHCSBGrefine_3235:HG4_Ill_MetaSV_3766:HG4_Ill_SVrefine2DISCOVARDovetail_3497:HG4_Ill_manta_1136:HG4_Ill_scalpel_4392:HG4_PB_pbsv_4615;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0403727;ClusterMaxSizeDiff=0.0403727;ClusterMaxEditDist=0.0403727;PBcalls=13;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=9782;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=4:69959842-69960172;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:49:0|1:38:1:1:46:./.:0:0:0:0:0/1:31:24:0/1:32:5:.:.:.
chr4	70467459	HG2_PB_PB10Xdip_22555	TATCCACTGATGGGAGACTAGAGGACAGGTCATATCACTGGATCCCTTGCAGACATTCCCTAGCACCAGTCTGGGGTGTGACAGCCCTACTGGGTGGCCAGGTCTAGAGGAGCAGCAGCACTCATAGTAGTCTGGCCCTCAGAGACTCTTACTCTTGGGCAAAGGAGGGCTGTACCACAACCATGCAACTTGAGAAATTAAAGGGTAGAGTAAAACTAAGACAACTTGAATAATTAATATAATCAAGAAAAAGTATATTATTGAAATAGAAATCAAATTAAAAGTCAATCATACTCAAAAATAGATGCTGTTACAGTTAAAATGATTATCTGACTAAATCTAGTAATATTTTAACAAAAGATATGAAAAAGTTGGACTCATTATAGTAATGAAATGATAGCTTAAAACTGAAAAGTAGATAAGTTCACCTTATTAGAAGGTAAAAAGAGGAAAATCCTATCATCTCAAGCAATAAAAACAGTTGTTCATAATCTTGAAATTCTATTAGTAAACTACAAATAGAAAAGAATTTCTTTACACCAACAAAGGCACTCCAAACAAAAAAGTTTCATCAAATGTAACCTTTATGTTAAAATAGTAAGAGCATTCTTATCAAGACGAAAAAAAGTCAGTGGTATGTACTAATGACAACTTTAATTCAACAATACTTTACTGCAGTTAAACAAGAAAAACAATTTTTAGAATAACAAAGATTTAGGAGTTTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGATATCATGTTATGTAACAAATCCAAAACAATATACAGATAAATCTTCAGAATGAGGAAGAGAAGTTTTAATTTTGCTGAATGCAAAACTATAACATAGCAACTGAAATTTCTGTGCACAAGTAAACGAAGATTTAATTTAAAAACTAAATTTCCACTGAAAAACTTGGAATAGTTTTTACAAAAGTTACATAATCTATTCATGCTTATAATTGCAAAATTGTATTAAAACCCACAATAGAAAAGTAAATAGAGCTAACTTGTTCACAGATAAGAAGATCAAAATTCATAAAGATGTCCATTCTCTAAAATCAATTTATAGATTAATTATGAATCTTATTAAGGGTCAGGAGTTCAAGACCAGTGTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCAGGTGCCTGTAATCCCAGATACTCTAGAGGCTGAGGCAGAGAATTGCTTGAACCCGGGAGGAGGAGGTTGCAGTGAGCCAAGATCACGCCACTGCAATCCACCCTGGGTGACAGAGAGAGACTCCATCTAAAAAAAATAAAAAATAAATGAATAAATAAATAAATCTTATTAAAATTTCAAAATCACAAGTTTCATAAACCTTTACAATTGTTGTAGAACTTTATATGTGATTCTAAAATCCATACGGAAAAGCAAAGAGCCAAAAATAATCAAGGAACTCCAGATGAAGAGATACAAGAGGAAGGAATATTATTTTACCAGATATCAAGAACTAATATAAAGGAAAGCAGTTAAGATAGTGAAAAAAAACAAAACCACTTATGTAATGAAATTCATGAATGACAAAGATGCAGGCATGCAGGAAAAAATGTTTTCAATAAATAGTGATGGGACAGCTCCTTACCCAAAACCCCATCTCTACATCACCATCATCAAAGACCAAAGGTAGATAAAACCACAAAGATAGGGAAAAAACAGAGCAGAAAAACTGGAAACTCTAAAAATCAGAGTGCCTCTCCTCCTCCAAAGGAAAGCAGCTCCTCACACGCAACAGAACAAAACTGGACGGAGAATGACTTTGACGAGCTGAGAGAAGAAGGCTTCAAACGATCAAACTGCTCCGAGCTACAGGAAGAAGTTCAAACCCATGGCAAAGAGGTTAAAAACCTTGAAAAAAAATTAGACGAATGGCTAACTAGAATCACCAATGAAGAAAAGCCCTTAAAGGACCTGATGGAGCTGAAAACCAAGGCACAAGAACTACGTGACAAATGCACAAGCCTCAGTAGCCGATTCAATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATCAAATGAATGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAACGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGTAGAACCTCCCCAGTCTAGCAAGGAAGGCCAACGTTCAAACTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGACTCACCAAAGTAGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCTGATCTCTTGGCAGAAACTCTACAAGCCAGAAGACAGTGGGGACCAATATTCACCATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCTAGCCAAACTAAGCTTCATAAGAGGAGAAGGAGAAATAAAATACTTTAGAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCCGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATAGAAAGGAACAACCAGTACCAGCCACTGCAAAAACATGCCACATTGTACAGACCATCGAGGCTAGGAAGAAACTGCATCAACTAATGAGCAAAATAACTAGCTAACATCATAATGACAGGATCAAGTTCACACATAAGAATATTAACCTTAAACATAAATGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGCCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGAAGAGACACACATAGGCTCAAAATAAAGTGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACCTTAAAGCACCAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAAGGATCAATTCAACAAGAAGAGCTAGCTGTCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTTAGAGACCTAGAAAGAGACTTAGACTCCCACACAATAATAATGAGAGACTTTGACACCCCACTGTCAACGTTAGACAGATCAATGAGACAGAAAGATAACAAGTATATCCAGGAATTGAACTCAGCTCTGCACCAAGTAGACCTAATACACATCTACAGAATTATCCACCCCAAATCAACAGAATATACATTCTTCTCAGCACCACACCGCACTTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAGAGCAATCAAATTAGAACTCAGGATTAAGAAATTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACTAACGACAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAGAACAGAGCAGGAAAGATCTAAAATTGACACCCCAACATCACAATTGAAAGAACTAGAGAAGCAAGAGCATAACACATTCAAGACCTAGCAGAAGGCAAGAAAAAACTAAGATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTTAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACCAAACTGATAGACCACTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGATGCAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAAGTACCATCAGAGAATACTATAAACACCTCTACACAAATAAACTAGAAAATCTAAAAGAAATGAATAAATTCCTTGACACGTACACCCTCCCAAGACTAAATCAGGAAGACATTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGAGGCAATAATTAATAGCTTAGCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCTGAATTCTACCAGAAGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAAGCAATAGAAAAAGAGGGAATCCTCCTTAAATCATTTTATGAGTCCAGCATCATCCTGATATCAAAGCCTGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCCTGATGAACATCGAGGCAAAAATCCTCAATAAAATACTGGCAAACCAAATCCAGCGGCACATCAAAAAGCTTACCCACCATGATCAAGTGGGCTTCATCCCTGGGACGCAAGGCTGGGTCAACATACGCAAATCAACAAACGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTGAAAAAATTCAACAACGCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATCTCAAAATAATAAGAGCTATCTATGACAGACCCACAGCCAATATCATACTGAATGGACAAAAACTGGAAGTATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGTGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGTTGACATGATTGTATATCTAGAAAACACCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCACGAGTGAGCTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGACGTAAGGACCTCTTCAAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGAGAAAATGGCCATACTGCCCAAGGTCATTTATAGATTCAATGCCATCCCCATCAAACTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGG	CAACCAGCTGGTGCTAAC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3770:HG4_PB_pbsv_4618:HG2_PB_pbsv_4587:HG2_10X_allpass_725:HG2_Ill_MetaSV_3588:HG2_Ill_tnscope_491:HG4_PB_SVrefine2PBcRDovetail_2352:HG4_PB_SVrefine2Falcon1Dovetail_2808:HG4_Ill_SVrefine2DISCOVARDovetail_3501:HG3_PB_SVrefine2Falcon1Dovetail_2830:HG2_PB_SVrefine2PBcRplusDovetail_8158:HG2_PB_SVrefine2PB10Xhap12_3339:HG2_PB_SVrefine2Falcon1plusDovetail_8783:HG2_PB_PB10Xdip_22555:HG2_10X_SVrefine210Xhap12_3360:HG4_10X_allpass_848:HG4_PB_assemblyticsfalcon_19143:HG3_PB_assemblyticsfalcon_19527:HG2_PB_assemblyticsfalcon_19582:HG2_PB_assemblyticsPBcR_18941:HG4_Ill_Krunchall_6764;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3360:HG2_PB_PB10Xdip_22555:HG2_PB_SVrefine2Falcon1plusDovetail_8783:HG2_PB_SVrefine2PB10Xhap12_3339:HG2_PB_SVrefine2PBcRplusDovetail_8158:HG3_PB_SVrefine2Falcon1Dovetail_2830:HG4_Ill_SVrefine2DISCOVARDovetail_3501:HG4_PB_SVrefine2Falcon1Dovetail_2808:HG4_PB_SVrefine2PBcRDovetail_2352;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00412371;ClusterMaxSizeDiff=0.00412371;ClusterMaxEditDist=0.00412371;PBcalls=13;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-5326;DistBack=-177;DistForward=-5344;DistMin=-5344;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:70467459-70472802;PctSeqSimilarity=0.9984;PctSizeSimilarity=1;PctRecOverlap=0.9968;SizeDiff=0;StartDistance=-17;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2811.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:68:38:0|1:61:0:0:32:./.:0:0:0:0:0/1:46:8:0/1:352:157:5012:.:.
chr4	71107998	HG2_PB_SVrefine2Falcon1plusDovetail_8786	TTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCACTCCCCCCACCCCACCAC	AAAA	20	PASS	ClusterIDs=HG4_PB_HySA_6887:HG4_10X_allpass_849:HG2_10X_allpass_726:HG2_PB_SVrefine2PB10Xhap12_3345:HG2_PB_PB10Xdip_22562:HG2_PB_PB10Xdip_22561:HG4_PB_SVrefine2PBcRDovetail_2356:HG2_PB_SVrefine2PB10Xhap12_3344:HG2_PB_SVrefine2Falcon1plusDovetail_8786:HG2_Ill_SVrefine2DISCOVARplusDovetail_9509:HG2_10X_SVrefine210Xhap12_3364:HG4_Ill_MetaSV_3773:HG4_Ill_Krunchall_6768:HG2_Ill_Krunchall_6523:HG2_Ill_scalpel_4497:HG2_PB_assemblyticsfalcon_19586:HG4_Ill_manta_1139:HG2_Ill_manta_1284:HG2_Ill_Spiral_317:HG4_PB_pbsv_4625:HG2_PB_pbsv_4593;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3364:HG2_Ill_SVrefine2DISCOVARplusDovetail_9509:HG2_PB_SVrefine2Falcon1plusDovetail_8786:HG2_PB_SVrefine2PB10Xhap12_3344:HG4_PB_SVrefine2PBcRDovetail_2356;NumExactMatchSVs=5;ClusterMaxShiftDist=0.197802;ClusterMaxSizeDiff=0.197802;ClusterMaxEditDist=0.197802;PBcalls=10;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-194;DistBack=14686;DistForward=-196;DistMin=-196;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:71107998-71108195;PctSeqSimilarity=0.9725;PctSizeSimilarity=0.9948;PctRecOverlap=0.9798;SizeDiff=1;StartDistance=-2;EndDistance=2;GTMatch=0;TruScore=98;MatchId=2812.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:26:0:0:31:./.:0:0:0:0:0/1:46:15:./.:.:.:.:.:.
chr4	71347138	HG2_Ill_250bpfermikitraw_6408	CATCTTCCTCAGCTCCACCAGAGACCACAGCTGCCCCACCCACACCTTCTGCAACTACACCAGCTCCACT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2206:HG2_PB_pbsv_4596:HG2_Ill_breakscan11_625:HG3_Ill_GATKHCSBGrefine_3073:HG2_Ill_SpiralSDKrefine_12347:HG2_Ill_GATKHCSBGrefine_3092:HG2_Ill_250bpfermikitraw_6408:HG3_PB_pbsv_4487:HG3_PB_assemblyticsfalcon_19539:HG2_PB_SVrefine2PBcRplusDovetail_8166:HG2_PB_SVrefine2PB10Xhap12_3349;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6408:HG2_Ill_GATKHCSBGrefine_3092:HG2_Ill_SpiralSDKrefine_12347:HG3_Ill_GATKHCSBGrefine_3073;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0285714;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.129496;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-69;DistBack=-175;DistForward=12498;DistMin=-175;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=379;REFWIDENED=4:71346935-71347382;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2813.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:./.:16:8:7:16:./.:0:0:0:0:0/1:8:4:./.:.:.:.:.:.
chr4	71382050	HG2_PB_SVrefine2Falcon2Bionano_2207	TATATATACGTATATATATACATATATATGTATATATATACATGTATATATATACGTATATATATATATACGTATATATATATATATATATATATATATATG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_318:HG2_PB_pbsv_4597:HG4_PB_pbsv_4627:HG3_PB_pbsv_4488:HG4_Ill_GATKHC_7744:HG4_Ill_GATKHCSBGrefine_3248:HG3_PB_SVrefine2PBcRDovetail_2081:HG2_Ill_GATKHC_7683:HG2_Ill_GATKHCSBGrefine_3093:HG4_Ill_SVrefine2DISCOVARDovetail_3506:HG3_Ill_SVrefine2DISCOVARDovetail_3522:HG2_PB_SVrefine2Falcon2Bionano_2207:HG2_Ill_SVrefine2DISCOVARplusDovetail_9511:HG2_10X_SVrefine210Xhap12_3366:HG3_PB_SVrefine2Falcon1Dovetail_2836:HG2_PB_SVrefine2Falcon1plusDovetail_8789:HG3_PB_assemblyticsfalcon_19541:HG2_PB_assemblyticsfalcon_19593:HG4_PB_assemblyticsfalcon_19153:HG4_10X_allpass_850:HG3_Ill_scalpel_4581:HG3_Ill_manta_1046:HG3_Ill_GATKHC_7675:HG2_Ill_scalpel_4502:HG3_Ill_Spiral_5012:HG2_Ill_SpiralSDKrefine_12349:HG4_PB_SVrefine2Falcon1Dovetail_2814:HG4_Ill_Spiral_375:HG3_PB_HySA_7079;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3366:HG2_Ill_SVrefine2DISCOVARplusDovetail_9511:HG2_PB_SVrefine2Falcon2Bionano_2207:HG3_Ill_SVrefine2DISCOVARDovetail_3522:HG4_Ill_SVrefine2DISCOVARDovetail_3506;NumExactMatchSVs=5;ClusterMaxShiftDist=0.252632;ClusterMaxSizeDiff=0.252632;ClusterMaxEditDist=0.252632;PBcalls=12;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-101;DistBack=22343;DistForward=61542;DistMin=22343;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=32;REFWIDENED=4:71382020-71382152;PctSeqSimilarity=0.9753;PctSizeSimilarity=0.9806;PctRecOverlap=0.6923;SizeDiff=-2;StartDistance=32;EndDistance=30;GTMatch=0;TruScore=88;MatchId=2814.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:34:0|1:36:1:0:30:./.:0:0:0:0:0/1:14:8:./.:.:.:.:.:.
chr4	71926412	HG4_PB_SVrefine2Falcon1Dovetail_2816	CTCTTTCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAATGCCG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3370:HG4_PB_HySA_6892:HG4_PB_assemblyticsfalcon_19158:HG3_PB_assemblyticsfalcon_19544:HG2_PB_assemblyticsPBcR_18957:HG4_Ill_Krunchall_6778:HG3_Ill_Krunchall_6417:HG2_PB_pbsv_4600:HG2_Ill_Krunchall_6529:HG3_PB_HySA_7080:HG2_PB_HySA_8660:HG4_PB_pbsv_4630:HG4_PB_SVrefine2Falcon1Dovetail_2816:HG4_Ill_svaba_5981:HG4_Ill_scalpel_4403:HG4_Ill_MetaSV_3775:HG4_Ill_GATKHCSBGrefine_3250:HG4_10X_allpass_851:HG3_PB_pbsv_4490:HG3_Ill_svaba_5974:HG3_Ill_scalpel_4583:HG3_Ill_manta_1047:HG3_Ill_MetaSV_3758:HG3_Ill_GATKHCSBGrefine_3075:HG3_Ill_150bpfermikitraw_6008:HG3_10X_allpass_885:HG2_PB_SVrefine2Falcon1plusDovetail_8791:HG2_Ill_svaba_5870:HG2_Ill_scalpel_4503:HG2_Ill_manta_1285:HG2_Ill_MetaSV_3591:HG2_Ill_GATKHCSBGrefine_3095:HG2_Ill_250bpfermikitraw_6411:HG2_Ill_150bpfermikitraw_5957:HG2_10X_allpass_727:HG4_Ill_Spiral_376:HG3_Ill_Spiral_5014:HG2_Ill_Spiral_319:HG2_Ill_breakscan11_626:HG3_PB_SVrefine2PBcRDovetail_2083:HG3_PB_SVrefine2Falcon1Dovetail_2838:HG3_Ill_SVrefine2DISCOVARDovetail_3525:HG2_PB_assemblyticsfalcon_19597:HG2_PB_SVrefine2PBcRplusDovetail_8168:HG2_PB_SVrefine2PB10Xhap12_3352:HG2_PB_SVrefine2Falcon2Bionano_2209:HG2_Ill_SVrefine2DISCOVARplusDovetail_9515;NumClusterSVs=47;ExactMatchIDs=HG2_10X_allpass_727:HG2_Ill_150bpfermikitraw_5957:HG2_Ill_250bpfermikitraw_6411:HG2_Ill_GATKHCSBGrefine_3095:HG2_Ill_MetaSV_3591:HG2_Ill_manta_1285:HG2_Ill_scalpel_4503:HG2_Ill_svaba_5870:HG2_PB_SVrefine2Falcon1plusDovetail_8791:HG3_10X_allpass_885:HG3_Ill_150bpfermikitraw_6008:HG3_Ill_GATKHCSBGrefine_3075:HG3_Ill_MetaSV_3758:HG3_Ill_manta_1047:HG3_Ill_scalpel_4583:HG3_Ill_svaba_5974:HG3_PB_pbsv_4490:HG4_10X_allpass_851:HG4_Ill_GATKHCSBGrefine_3250:HG4_Ill_MetaSV_3775:HG4_Ill_scalpel_4403:HG4_Ill_svaba_5981:HG4_PB_SVrefine2Falcon1Dovetail_2816:HG4_PB_pbsv_4630;NumExactMatchSVs=24;ClusterMaxShiftDist=0.201299;ClusterMaxSizeDiff=0.201299;ClusterMaxEditDist=0.201299;PBcalls=17;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=15;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-160;DistBack=-173;DistForward=-154;DistMin=-173;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:71926402-71926577;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2815.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:1/1:0:20:0:19:./.:0:0:0:0:1/1:0:50:./.:.:.:.:.:.
chr4	72829626	HG2_PB_SVrefine2Falcon2Bionano_2214	ACTTATTTTTGTAATCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACCGCGCCCGGCTAACTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_320:HG2_10X_allpass_728:HG4_PB_assemblyticsfalcon_19169:HG2_PB_assemblyticsfalcon_19608:HG4_Ill_Krunchall_6785:HG3_Ill_Krunchall_6422:HG2_Ill_Krunchall_6536:HG3_PB_assemblyticsfalcon_19552:HG2_PB_assemblyticsPBcR_18966:HG2_PB_HySA_8672:HG4_Ill_MetaSV_3779:HG3_PB_HySA_7089:HG2_Ill_tnscope_492:HG2_Ill_MetaSV_3595:HG4_PB_pbsv_4637:HG4_PB_SVrefine2PBcRDovetail_2363:HG4_PB_SVrefine2Falcon1Dovetail_2822:HG4_Ill_svaba_5995:HG4_Ill_scalpel_4412:HG4_Ill_manta_1141:HG4_Ill_SVrefine2DISCOVARDovetail_3515:HG4_Ill_GATKHCSBGrefine_3254:HG4_10X_allpass_852:HG3_PB_SVrefine2PBcRDovetail_2087:HG3_PB_SVrefine2Falcon1Dovetail_2842:HG3_Ill_svaba_5985:HG3_Ill_scalpel_4588:HG3_Ill_manta_1049:HG3_Ill_SVrefine2DISCOVARDovetail_3532:HG3_Ill_MetaSV_3762:HG3_Ill_GATKHCSBGrefine_3080:HG3_10X_allpass_887:HG2_PB_pbsv_4606:HG2_PB_SVrefine2PBcRplusDovetail_8175:HG2_PB_SVrefine2PB10Xhap12_3358:HG2_PB_SVrefine2Falcon2Bionano_2214:HG2_PB_SVrefine2Falcon1plusDovetail_8798:HG2_Ill_svaba_5880:HG2_Ill_scalpel_4511:HG2_Ill_manta_1288:HG2_Ill_SpiralSDKrefine_12357:HG2_Ill_SVrefine2DISCOVARplusDovetail_9521:HG2_Ill_GATKHCSBGrefine_3101:HG2_10X_SVrefine210Xhap12_3378:HG3_PB_pbsv_4494:HG2_Ill_breakscan11_628:HG4_Ill_Spiral_377:HG3_Ill_Spiral_5020;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3378:HG2_Ill_GATKHCSBGrefine_3101:HG2_Ill_SVrefine2DISCOVARplusDovetail_9521:HG2_Ill_SpiralSDKrefine_12357:HG2_Ill_manta_1288:HG2_Ill_scalpel_4511:HG2_Ill_svaba_5880:HG2_PB_SVrefine2Falcon1plusDovetail_8798:HG2_PB_SVrefine2Falcon2Bionano_2214:HG2_PB_SVrefine2PB10Xhap12_3358:HG2_PB_SVrefine2PBcRplusDovetail_8175:HG2_PB_pbsv_4606:HG3_10X_allpass_887:HG3_Ill_GATKHCSBGrefine_3080:HG3_Ill_MetaSV_3762:HG3_Ill_SVrefine2DISCOVARDovetail_3532:HG3_Ill_manta_1049:HG3_Ill_scalpel_4588:HG3_Ill_svaba_5985:HG3_PB_SVrefine2Falcon1Dovetail_2842:HG3_PB_SVrefine2PBcRDovetail_2087:HG4_10X_allpass_852:HG4_Ill_GATKHCSBGrefine_3254:HG4_Ill_SVrefine2DISCOVARDovetail_3515:HG4_Ill_manta_1141:HG4_Ill_scalpel_4412:HG4_Ill_svaba_5995:HG4_PB_SVrefine2Falcon1Dovetail_2822:HG4_PB_SVrefine2PBcRDovetail_2363:HG4_PB_pbsv_4637;NumExactMatchSVs=30;ClusterMaxShiftDist=0.102484;ClusterMaxSizeDiff=0.102484;ClusterMaxEditDist=0.102484;PBcalls=17;Illcalls=27;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=31113;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=4:72829627-72829972;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2816.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:70:1/1:1:29:1:35:./.:0:0:0:0:1/1:0:53:./.:2:15:.:.:.
chr4	74312304	HG4_Ill_manta_1144	CTGATAAAGATGATTATCATTCTTACGGAATTTCTCGTGGAGCAGAAAGTTTGCTCTCCATGTTA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3385:HG2_PB_HySA_8691:HG4_PB_pbsv_4647:HG2_PB_pbsv_4612:HG3_PB_pbsv_4502:HG4_PB_HySA_6918:HG3_PB_HySA_7111:HG4_Ill_svaba_6008:HG4_Ill_scalpel_4422:HG4_Ill_manta_1144:HG4_Ill_Krunchall_6799:HG4_Ill_GATKHCSBGrefine_3260:HG4_Ill_250bpfermikitraw_6478:HG4_Ill_150bpfermikitraw_6181:HG3_Ill_svaba_6002:HG3_Ill_scalpel_4597:HG3_Ill_manta_1051:HG3_Ill_Krunchall_6434:HG3_Ill_GATKHCSBGrefine_3087:HG3_Ill_250bpfermikitraw_6220:HG3_Ill_150bpfermikitraw_6029:HG2_Ill_svaba_5888:HG2_Ill_scalpel_4519:HG2_Ill_manta_1290:HG2_Ill_SpiralSDKrefine_12363:HG2_Ill_GATKHCSBGrefine_3103:HG2_Ill_250bpfermikitraw_6424:HG2_Ill_150bpfermikitraw_5970:HG4_PB_SVrefine2PBcRDovetail_2370:HG4_PB_SVrefine2Falcon1Dovetail_2829:HG4_Ill_SVrefine2DISCOVARDovetail_3520:HG3_PB_SVrefine2PBcRDovetail_2094:HG3_PB_SVrefine2Falcon1Dovetail_2848:HG3_Ill_SVrefine2DISCOVARDovetail_3537:HG2_PB_SVrefine2PBcRplusDovetail_8180:HG2_PB_SVrefine2PB10Xhap12_3363:HG2_PB_SVrefine2Falcon2Bionano_2218:HG2_PB_SVrefine2Falcon1plusDovetail_8803:HG2_Ill_SVrefine2DISCOVARplusDovetail_9527;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_5970:HG2_Ill_250bpfermikitraw_6424:HG2_Ill_GATKHCSBGrefine_3103:HG2_Ill_SpiralSDKrefine_12363:HG2_Ill_manta_1290:HG2_Ill_scalpel_4519:HG2_Ill_svaba_5888:HG3_Ill_150bpfermikitraw_6029:HG3_Ill_250bpfermikitraw_6220:HG3_Ill_GATKHCSBGrefine_3087:HG3_Ill_Krunchall_6434:HG3_Ill_manta_1051:HG3_Ill_scalpel_4597:HG3_Ill_svaba_6002:HG4_Ill_150bpfermikitraw_6181:HG4_Ill_250bpfermikitraw_6478:HG4_Ill_GATKHCSBGrefine_3260:HG4_Ill_Krunchall_6799:HG4_Ill_manta_1144:HG4_Ill_scalpel_4422:HG4_Ill_svaba_6008;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.03125;PBcalls=14;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=-64;DistBack=6;DistForward=-7;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=4:74312299-74312437;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2817.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:69:1/1:3:29:3:23:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr4	74701696	HG4_Ill_250bpfermikitraw_6486	CTCTCTGTTTGTTTGTTATTGGTGTATAAGAATGCTTGTGATTTTTGTGCATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACCATG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3387:HG4_PB_pbsv_4650:HG3_PB_pbsv_4504:HG2_PB_pbsv_4615:HG3_PB_SVrefine2Falcon1Dovetail_2850:HG4_PB_SVrefine2PBcRDovetail_2372:HG4_PB_SVrefine2Falcon1Dovetail_2831:HG4_Ill_svaba_6014:HG4_Ill_SVrefine2DISCOVARDovetail_3523:HG4_Ill_250bpfermikitraw_6486:HG3_PB_assemblyticsfalcon_19571:HG3_PB_SVrefine2PBcRDovetail_2096:HG3_Ill_svaba_6009:HG3_Ill_SVrefine2DISCOVARDovetail_3540:HG3_Ill_250bpfermikitraw_6227:HG2_PB_SVrefine2PBcRplusDovetail_8182:HG2_PB_SVrefine2PB10Xhap12_3365:HG2_PB_SVrefine2Falcon1plusDovetail_8805:HG2_Ill_svaba_5897:HG2_Ill_SVrefine2DISCOVARplusDovetail_9529;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3387:HG4_PB_SVrefine2PBcRDovetail_2372:HG4_PB_SVrefine2Falcon1Dovetail_2831:HG4_Ill_svaba_6014:HG4_Ill_SVrefine2DISCOVARDovetail_3523:HG4_Ill_250bpfermikitraw_6486:HG3_PB_assemblyticsfalcon_19571:HG3_PB_SVrefine2PBcRDovetail_2096:HG3_Ill_svaba_6009:HG3_Ill_SVrefine2DISCOVARDovetail_3540:HG3_Ill_250bpfermikitraw_6227:HG2_PB_SVrefine2PBcRplusDovetail_8182:HG2_PB_SVrefine2PB10Xhap12_3365:HG2_PB_SVrefine2Falcon1plusDovetail_8805:HG2_Ill_svaba_5897:HG2_Ill_SVrefine2DISCOVARplusDovetail_9529;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0168067;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.0253165;PBcalls=11;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-119;DistBack=24711;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=119;REFWIDENED=4:74701697-74701934;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2818.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:44:1/1:2:18:0:14:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr4	75496154	HG4_Ill_GATKHCSBGrefine_3264	TTAAAGATTTGGAAACCTGTAAAGTGAAACTTAAAAACTAGGAGCAATATTATTGCTGAATATATTTTACATCCATTACTTTAATTAATTTCA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_629:HG4_PB_pbsv_4651:HG4_PB_SVrefine2Falcon1Dovetail_2832:HG4_Ill_svaba_6019:HG4_Ill_Krunchall_6814:HG4_Ill_GATKHC_7783:HG4_Ill_GATKHCSBGrefine_3264:HG4_Ill_250bpfermikitraw_6493:HG4_Ill_150bpfermikitraw_6195:HG4_10X_allpass_855:HG3_PB_pbsv_4506:HG3_PB_SVrefine2PBcRDovetail_2097:HG3_PB_SVrefine2Falcon1Dovetail_2852:HG3_Ill_svaba_6014:HG3_Ill_scalpel_4608:HG3_Ill_manta_1053:HG3_Ill_SVrefine2DISCOVARDovetail_3543:HG3_Ill_Krunchall_6449:HG3_Ill_GATKHC_7717:HG3_Ill_GATKHCSBGrefine_3091:HG3_Ill_250bpfermikitraw_6234:HG3_Ill_150bpfermikitraw_6043:HG3_CG_vcfBeta_2630:HG3_10X_allpass_890:HG2_PB_pbsv_4616:HG2_PB_SVrefine2PBcRplusDovetail_8183:HG2_PB_SVrefine2PB10Xhap12_3366:HG2_PB_SVrefine2Falcon2Bionano_2219:HG2_PB_SVrefine2Falcon1plusDovetail_8806:HG2_Ill_svaba_5902:HG2_Ill_scalpel_4530:HG2_Ill_manta_1291:HG2_Ill_SpiralSDKrefine_12372:HG2_Ill_SVrefine2DISCOVARplusDovetail_9531:HG2_Ill_Krunchall_6563:HG2_Ill_GATKHC_7715:HG2_Ill_GATKHCSBGrefine_3107:HG2_Ill_250bpfermikitraw_6439:HG2_Ill_150bpfermikitraw_5984:HG2_CG_vcfBeta_2716:HG2_10X_allpass_729:HG2_10X_SVrefine210Xhap12_3388;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3388:HG2_10X_allpass_729:HG2_CG_vcfBeta_2716:HG2_Ill_150bpfermikitraw_5984:HG2_Ill_250bpfermikitraw_6439:HG2_Ill_GATKHCSBGrefine_3107:HG2_Ill_GATKHC_7715:HG2_Ill_Krunchall_6563:HG2_Ill_SVrefine2DISCOVARplusDovetail_9531:HG2_Ill_SpiralSDKrefine_12372:HG2_Ill_manta_1291:HG2_Ill_scalpel_4530:HG2_Ill_svaba_5902:HG2_PB_SVrefine2Falcon1plusDovetail_8806:HG2_PB_SVrefine2Falcon2Bionano_2219:HG2_PB_SVrefine2PB10Xhap12_3366:HG2_PB_SVrefine2PBcRplusDovetail_8183:HG2_PB_pbsv_4616:HG3_10X_allpass_890:HG3_CG_vcfBeta_2630:HG3_Ill_150bpfermikitraw_6043:HG3_Ill_250bpfermikitraw_6234:HG3_Ill_GATKHCSBGrefine_3091:HG3_Ill_GATKHC_7717:HG3_Ill_Krunchall_6449:HG3_Ill_SVrefine2DISCOVARDovetail_3543:HG3_Ill_manta_1053:HG3_Ill_scalpel_4608:HG3_Ill_svaba_6014:HG3_PB_SVrefine2Falcon1Dovetail_2852:HG3_PB_SVrefine2PBcRDovetail_2097:HG3_PB_pbsv_4506:HG4_10X_allpass_855:HG4_Ill_150bpfermikitraw_6195:HG4_Ill_250bpfermikitraw_6493:HG4_Ill_GATKHCSBGrefine_3264:HG4_Ill_GATKHC_7783:HG4_Ill_Krunchall_6814:HG4_Ill_svaba_6019:HG4_PB_SVrefine2Falcon1Dovetail_2832;NumExactMatchSVs=40;ClusterMaxShiftDist=0.0217391;ClusterMaxSizeDiff=0.0217391;ClusterMaxEditDist=0.0217391;PBcalls=10;Illcalls=26;TenXcalls=4;CGcalls=2;PBexactcalls=9;Illexactcalls=25;TenXexactcalls=4;CGexactcalls=2;HG2count=19;HG3count=14;HG4count=9;NumTechs=4;NumTechsExact=4;SVLEN=-92;DistBack=69178;DistForward=18576;DistMin=18576;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:75496155-75496248;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2819.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:./.:1:6:0:2:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr4	75642742	HG3_PB_assemblyticsfalcon_19575	CTTCCTGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTCAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAGTGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGACTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGTTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACATTTAAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAAGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGACTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTCGTTGGTTTGAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGATACCGGTTGTTCCTTTCCATGTTTAGTGATTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAACCTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTAGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGTCTCCTTGAGCTGTGGTGGGCTCCACTCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTACGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTTGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTATTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCTCCGC	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3781:HG2_PB_pbsv_4619:HG2_PB_assemblyticsfalcon_19632:HG2_PB_assemblyticsPBcR_18989:HG4_PB_pbsv_4652:HG3_Ill_GATKHCSBGrefine_3092:HG2_Ill_GATKHCSBGrefine_3108:HG3_10X_allpass_891:HG2_10X_allpass_730:HG4_PB_SVrefine2Falcon1Dovetail_2833:HG3_PB_assemblyticsfalcon_19575:HG3_PB_SVrefine2PBcRDovetail_2098:HG3_PB_SVrefine2Falcon1Dovetail_2853:HG2_PB_SVrefine2PBcRplusDovetail_8184:HG2_PB_SVrefine2PB10Xhap12_3367:HG2_PB_SVrefine2Falcon1plusDovetail_8807:HG2_10X_SVrefine210Xhap12_3389:HG3_PB_pbsv_4507:HG2_PB_pbsv_4618:HG3_Ill_MetaSV_3767:HG2_Ill_MetaSV_3597;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3389:HG2_PB_SVrefine2Falcon1plusDovetail_8807:HG2_PB_SVrefine2PB10Xhap12_3367:HG2_PB_SVrefine2PBcRplusDovetail_8184:HG3_PB_SVrefine2Falcon1Dovetail_2853:HG3_PB_SVrefine2PBcRDovetail_2098:HG3_PB_assemblyticsfalcon_19575:HG4_PB_SVrefine2Falcon1Dovetail_2833;NumExactMatchSVs=8;ClusterMaxShiftDist=0.153793;ClusterMaxSizeDiff=0.153793;ClusterMaxEditDist=0.153793;PBcalls=13;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-6057;DistBack=-620;DistForward=7390;DistMin=-620;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:75642743-75648812;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=0.9998;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2820.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:74:./.:0:4:0:4:./.:0:0:0:0:1/1:0:34:1/1:3:414:6074:.:.
chr4	76948610	HG4_Ill_SVrefine2DISCOVARDovetail_3534	TACAGATAAATGTCATCAAAAAATGGTAAAGGGGGAAGCCAACCAACCAGTCAGAAAAATTGGTAGACTCATAGGGGTGATAATGCCGTGTTAGGATTCTATAAAATCTGGTCCTCAGTTTTTCCAGTCCAGAAATTCTCATTTTTTCCTAATCATCCAGGGTAAGCATATTCTCAGAGAGTTAACTCTGCTAACCAAATCTCAGATAGACTAAGATGAAAATTAAAAGACAGTGTATCCATTACAATCCATTACATTTGATG	T	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_3115:HG4_PB_pbsv_4660:HG2_Ill_SVrefine2DISCOVARplusDovetail_9538:HG2_PB_pbsv_4628:HG4_Ill_GATKHCSBGrefine_3276:HG2_PB_HySA_8716:HG4_Ill_MetaSV_3785:HG2_Ill_MetaSV_3600:HG4_PB_SVrefine2PBcRDovetail_2378:HG4_PB_SVrefine2Falcon1Dovetail_2839:HG4_PB_HySA_6942:HG4_Ill_SVrefine2DISCOVARDovetail_3534:HG4_Ill_GATKHCSBGrefine_3275:HG4_10X_allpass_857:HG3_PB_SVrefine2Falcon1Dovetail_2862:HG2_PB_SVrefine2PBcRplusDovetail_8190:HG2_PB_SVrefine2Falcon2Bionano_2225:HG2_PB_SVrefine2Falcon1plusDovetail_8815;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3115:HG4_PB_SVrefine2PBcRDovetail_2378:HG4_PB_SVrefine2Falcon1Dovetail_2839:HG4_PB_HySA_6942:HG4_Ill_SVrefine2DISCOVARDovetail_3534:HG4_Ill_GATKHCSBGrefine_3275:HG4_10X_allpass_857:HG3_PB_SVrefine2Falcon1Dovetail_2862:HG2_PB_SVrefine2PBcRplusDovetail_8190:HG2_PB_SVrefine2Falcon2Bionano_2225:HG2_PB_SVrefine2Falcon1plusDovetail_8815;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0114286;ClusterMaxSizeDiff=0.0114286;ClusterMaxEditDist=0.0229885;PBcalls=10;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-262;DistBack=-263;DistForward=-193;DistMin=-263;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=248;REFWIDENED=4:76948611-76949120;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2821.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:26:0|1:16:2:3:22:./.:0:0:0:0:0/1:40:21:./.:.:.:.:.:.
chr4	77840019	HG2_PB_assemblyticsPBcR_19004	AAAAATAAATAAATAAAAAAATAAAAAATAAAAAAATAAAAAAATAAAAATAAAATAAAAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_4634:HG2_Ill_GATKHC_7734:HG2_Ill_scalpel_4544:HG2_PB_HySA_8724:HG2_PB_PB10Xdip_22636:HG4_PB_pbsv_4666:HG4_PB_assemblyticsfalcon_19219:HG3_PB_pbsv_4525:HG2_PB_assemblyticsPBcR_19004:HG3_PB_assemblyticsfalcon_19603:HG2_PB_assemblyticsfalcon_19652;NumClusterSVs=11;ExactMatchIDs=HG2_PB_assemblyticsPBcR_19004:HG3_PB_pbsv_4525;NumExactMatchSVs=2;ClusterMaxShiftDist=0.184874;ClusterMaxSizeDiff=0.184874;ClusterMaxEditDist=0.189655;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-60;DistBack=1149;DistForward=22683;DistMin=1149;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=29;REFWIDENED=4:77840015-77840103;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2822.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:60:1/1:0:30:2:12:./.:0:0:0:0:./.:1:2:./.:.:.:.:.:.
chr4	79269120	HG4_Ill_MetaSV_3788	CAAAGCTTCAAGATAGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACTGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGACCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACAGCAGGGTATTCCAACAGACCTGCATCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAACACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGGAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAGTCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTAGTCAGGAAACCCATCTCATGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACAAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACAGAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGTAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCTCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCAGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAACAAAAAAATTAAAAAAAAAATAAAATAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_630:HG3_10X_allpass_892:HG3_Ill_Krunchall_6476:HG4_PB_assemblyticsfalcon_19229:HG2_PB_assemblyticsfalcon_19661:HG3_PB_assemblyticsfalcon_19607:HG2_PB_assemblyticsPBcR_19012:HG2_10X_allpass_731:HG4_10X_allpass_858:HG2_PB_HySA_8730:HG2_Ill_tnscope_493:HG4_PB_pbsv_4669:HG4_PB_SVrefine2PBcRDovetail_2380:HG4_PB_SVrefine2Falcon1Dovetail_2843:HG4_Ill_SVrefine2DISCOVARDovetail_3541:HG4_Ill_MetaSV_3788:HG4_Ill_GATKHCSBGrefine_3280:HG3_PB_pbsv_4529:HG3_PB_SVrefine2PBcRDovetail_2106:HG3_PB_SVrefine2Falcon1Dovetail_2866:HG3_Ill_SVrefine2DISCOVARDovetail_3565:HG3_Ill_MetaSV_3775:HG3_Ill_GATKHCSBGrefine_3105:HG2_PB_pbsv_4636:HG2_PB_SVrefine2PBcRplusDovetail_8193:HG2_PB_SVrefine2PB10Xhap12_3378:HG2_PB_SVrefine2Falcon1plusDovetail_8820:HG2_Ill_SVrefine2DISCOVARplusDovetail_9545:HG2_Ill_MetaSV_3604:HG2_Ill_GATKHCSBGrefine_3120:HG2_10X_SVrefine210Xhap12_3396;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3396:HG2_Ill_GATKHCSBGrefine_3120:HG2_Ill_MetaSV_3604:HG2_Ill_SVrefine2DISCOVARplusDovetail_9545:HG2_PB_SVrefine2Falcon1plusDovetail_8820:HG2_PB_SVrefine2PB10Xhap12_3378:HG2_PB_SVrefine2PBcRplusDovetail_8193:HG2_PB_pbsv_4636:HG3_Ill_GATKHCSBGrefine_3105:HG3_Ill_MetaSV_3775:HG3_Ill_SVrefine2DISCOVARDovetail_3565:HG3_PB_SVrefine2Falcon1Dovetail_2866:HG3_PB_SVrefine2PBcRDovetail_2106:HG3_PB_pbsv_4529:HG4_Ill_GATKHCSBGrefine_3280:HG4_Ill_MetaSV_3788:HG4_Ill_SVrefine2DISCOVARDovetail_3541:HG4_PB_SVrefine2Falcon1Dovetail_2843:HG4_PB_SVrefine2PBcRDovetail_2380:HG4_PB_pbsv_4669;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00444811;ClusterMaxSizeDiff=0.00444811;ClusterMaxEditDist=0.00444811;PBcalls=15;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6075;DistBack=3482;DistForward=-6060;DistMin=-6060;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:79269121-79275209;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2824.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:128:1/1:0:7:0:7:./.:0:0:0:0:1/1:0:21:1/1:0:432:6111:.:.
chr4	80205728	HG4_Ill_scalpel_4454	TAAAGAATGATTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_631:HG2_PB_assemblyticsPBcR_19018:HG2_PB_SVrefine2PBcRplusDovetail_8195:HG3_PB_SVrefine2PBcRDovetail_2108:HG4_Ill_Krunchall_6849:HG3_Ill_Krunchall_6483:HG2_Ill_Krunchall_6592:HG3_PB_assemblyticsfalcon_19617:HG4_PB_assemblyticsfalcon_19235:HG4_Ill_Spiral_379:HG3_Ill_Spiral_5076:HG2_Ill_Spiral_321:HG3_PB_pbsv_4532:HG2_PB_pbsv_4638:HG4_Ill_MetaSV_3791:HG2_Ill_tnscope_494:HG2_Ill_MetaSV_3606:HG4_PB_pbsv_4673:HG4_PB_SVrefine2PBcRDovetail_2383:HG4_PB_SVrefine2Falcon1Dovetail_2847:HG4_Ill_scalpel_4454:HG4_Ill_manta_1149:HG4_Ill_SVrefine2DISCOVARDovetail_3543:HG4_Ill_GATKHCSBGrefine_3281:HG4_10X_allpass_859:HG3_PB_SVrefine2Falcon1Dovetail_2870:HG3_PB_HySA_7149:HG3_Ill_scalpel_4631:HG3_Ill_manta_1058:HG3_Ill_MetaSV_3777:HG3_Ill_GATKHCSBGrefine_3106:HG3_10X_allpass_893:HG2_PB_SVrefine2PB10Xhap12_3381:HG2_PB_SVrefine2Falcon1plusDovetail_8822:HG2_Ill_manta_1294:HG2_Ill_SVrefine2DISCOVARplusDovetail_9547:HG2_Ill_GATKHCSBGrefine_3121:HG2_10X_allpass_732:HG2_10X_SVrefine210Xhap12_3400;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3400:HG2_10X_allpass_732:HG2_Ill_GATKHCSBGrefine_3121:HG2_Ill_SVrefine2DISCOVARplusDovetail_9547:HG2_Ill_manta_1294:HG2_PB_SVrefine2Falcon1plusDovetail_8822:HG2_PB_SVrefine2PB10Xhap12_3381:HG3_10X_allpass_893:HG3_Ill_GATKHCSBGrefine_3106:HG3_Ill_MetaSV_3777:HG3_Ill_manta_1058:HG3_Ill_scalpel_4631:HG3_PB_HySA_7149:HG3_PB_SVrefine2Falcon1Dovetail_2870:HG4_10X_allpass_859:HG4_Ill_GATKHCSBGrefine_3281:HG4_Ill_SVrefine2DISCOVARDovetail_3543:HG4_Ill_manta_1149:HG4_Ill_scalpel_4454:HG4_PB_SVrefine2Falcon1Dovetail_2847:HG4_PB_SVrefine2PBcRDovetail_2383:HG4_PB_pbsv_4673;NumExactMatchSVs=22;ClusterMaxShiftDist=0.332795;ClusterMaxSizeDiff=0.332795;ClusterMaxEditDist=0.332795;PBcalls=14;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-363;DistForward=-320;DistMin=-363;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:80205729-80206071;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2825.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:52:0|1:34:1:0:43:./.:0:0:0:0:0/1:31:31:0/1:31:12:.:.:.
chr4	81302526	HG3_PB_pbsv_4535	ACATATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG3_Ill_Spiral_5082:HG4_PB_assemblyticsfalcon_19242:HG2_PB_assemblyticsfalcon_19671:HG3_PB_assemblyticsfalcon_19627:HG2_PB_assemblyticsPBcR_19031:HG4_Ill_Krunchall_6862:HG3_Ill_Krunchall_6489:HG2_Ill_Krunchall_6602:HG4_Ill_Spiral_381:HG2_Ill_Spiral_323:HG4_PB_HySA_6971:HG3_PB_HySA_7157:HG4_Ill_MetaSV_3794:HG3_Ill_MetaSV_3779:HG2_Ill_tnscope_495:HG2_Ill_MetaSV_3608:HG4_PB_pbsv_4679:HG4_PB_SVrefine2Falcon1Dovetail_2849:HG4_Ill_svaba_6051:HG4_Ill_scalpel_4463:HG4_Ill_manta_1152:HG4_Ill_SVrefine2DISCOVARDovetail_3549:HG4_Ill_GATKHCSBGrefine_3283:HG4_10X_allpass_861:HG3_PB_pbsv_4535:HG3_PB_SVrefine2PBcRDovetail_2110:HG3_PB_SVrefine2Falcon1Dovetail_2873:HG3_Ill_svaba_6043:HG3_Ill_scalpel_4634:HG3_Ill_manta_1059:HG3_Ill_SVrefine2DISCOVARDovetail_3570:HG3_Ill_GATKHCSBGrefine_3110:HG3_10X_allpass_895:HG2_PB_pbsv_4641:HG2_PB_SVrefine2PBcRplusDovetail_8197:HG2_PB_SVrefine2PB10Xhap12_3383:HG2_PB_SVrefine2Falcon1plusDovetail_8824:HG2_Ill_svaba_5929:HG2_Ill_scalpel_4555:HG2_Ill_manta_1296:HG2_Ill_breakscan11_632:HG2_Ill_SpiralSDKrefine_12397:HG2_Ill_SVrefine2DISCOVARplusDovetail_9551:HG2_Ill_GATKHCSBGrefine_3125:HG2_10X_allpass_733:HG2_10X_SVrefine210Xhap12_3405;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3405:HG2_10X_allpass_733:HG2_Ill_GATKHCSBGrefine_3125:HG2_Ill_SVrefine2DISCOVARplusDovetail_9551:HG2_Ill_SpiralSDKrefine_12397:HG2_Ill_breakscan11_632:HG2_Ill_manta_1296:HG2_Ill_scalpel_4555:HG2_Ill_svaba_5929:HG2_PB_SVrefine2Falcon1plusDovetail_8824:HG2_PB_SVrefine2PB10Xhap12_3383:HG2_PB_SVrefine2PBcRplusDovetail_8197:HG2_PB_pbsv_4641:HG3_10X_allpass_895:HG3_Ill_GATKHCSBGrefine_3110:HG3_Ill_SVrefine2DISCOVARDovetail_3570:HG3_Ill_manta_1059:HG3_Ill_scalpel_4634:HG3_Ill_svaba_6043:HG3_PB_SVrefine2Falcon1Dovetail_2873:HG3_PB_SVrefine2PBcRDovetail_2110:HG3_PB_pbsv_4535:HG4_10X_allpass_861:HG4_Ill_GATKHCSBGrefine_3283:HG4_Ill_SVrefine2DISCOVARDovetail_3549:HG4_Ill_manta_1152:HG4_Ill_scalpel_4463:HG4_Ill_svaba_6051:HG4_PB_SVrefine2Falcon1Dovetail_2849:HG4_PB_pbsv_4679;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0748503;ClusterMaxSizeDiff=0.0748503;ClusterMaxEditDist=0.0748503;PBcalls=15;Illcalls=27;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=17255;DistForward=-327;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:81302527-81302878;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2826.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:./.:0:3:0:8:./.:0:0:0:0:1/1:0:34:0/1:2:11:.:.:.
chr4	81991515	HG3_Ill_manta_1062	CAAGAAATAGCTTTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_633:HG4_PB_assemblyticsfalcon_19247:HG2_PB_assemblyticsfalcon_19676:HG2_PB_HySA_8747:HG4_Ill_Krunchall_6868:HG3_Ill_Krunchall_6498:HG2_Ill_Krunchall_6606:HG3_PB_assemblyticsfalcon_19630:HG2_PB_assemblyticsPBcR_19039:HG3_PB_pbsv_4539:HG2_PB_pbsv_4643:HG4_PB_pbsv_4681:HG4_Ill_MetaSV_3795:HG3_Ill_MetaSV_3782:HG2_Ill_tnscope_496:HG2_Ill_MetaSV_3609:HG4_PB_SVrefine2PBcRDovetail_2385:HG4_PB_SVrefine2Falcon1Dovetail_2850:HG4_Ill_svaba_6061:HG4_Ill_scalpel_4470:HG4_Ill_manta_1153:HG4_Ill_SVrefine2DISCOVARDovetail_3553:HG4_Ill_GATKHCSBGrefine_3286:HG4_10X_allpass_862:HG3_PB_SVrefine2PBcRDovetail_2111:HG3_PB_SVrefine2Falcon1Dovetail_2874:HG3_Ill_svaba_6054:HG3_Ill_scalpel_4641:HG3_Ill_manta_1062:HG3_Ill_SVrefine2DISCOVARDovetail_3575:HG3_Ill_GATKHCSBGrefine_3115:HG3_10X_allpass_898:HG2_PB_SVrefine2PBcRplusDovetail_8198:HG2_PB_SVrefine2PB10Xhap12_3384:HG2_PB_SVrefine2Falcon2Bionano_2229:HG2_PB_SVrefine2Falcon1plusDovetail_8825:HG2_Ill_svaba_5937:HG2_Ill_scalpel_4559:HG2_Ill_manta_1297:HG2_Ill_SVrefine2DISCOVARplusDovetail_9554:HG2_Ill_GATKHCSBGrefine_3127:HG2_10X_allpass_734:HG2_10X_SVrefine210Xhap12_3406;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3406:HG2_10X_allpass_734:HG2_Ill_GATKHCSBGrefine_3127:HG2_Ill_SVrefine2DISCOVARplusDovetail_9554:HG2_Ill_manta_1297:HG2_Ill_scalpel_4559:HG2_Ill_svaba_5937:HG2_PB_SVrefine2Falcon1plusDovetail_8825:HG2_PB_SVrefine2Falcon2Bionano_2229:HG2_PB_SVrefine2PB10Xhap12_3384:HG2_PB_SVrefine2PBcRplusDovetail_8198:HG3_10X_allpass_898:HG3_Ill_GATKHCSBGrefine_3115:HG3_Ill_SVrefine2DISCOVARDovetail_3575:HG3_Ill_manta_1062:HG3_Ill_scalpel_4641:HG3_Ill_svaba_6054:HG3_PB_SVrefine2Falcon1Dovetail_2874:HG3_PB_SVrefine2PBcRDovetail_2111:HG4_10X_allpass_862:HG4_Ill_GATKHCSBGrefine_3286:HG4_Ill_SVrefine2DISCOVARDovetail_3553:HG4_Ill_manta_1153:HG4_Ill_scalpel_4470:HG4_Ill_svaba_6061:HG4_PB_SVrefine2Falcon1Dovetail_2850:HG4_PB_SVrefine2PBcRDovetail_2385;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0920635;ClusterMaxSizeDiff=0.0920635;ClusterMaxEditDist=0.0920635;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-842;DistForward=-307;DistMin=-842;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:81991516-81991851;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2827.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:17:0:14:./.:0:0:0:0:1/1:0:44:./.:1:8:.:.:.
chr4	82772726	HG2_Ill_GATKHC_7769	AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAG	A	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_3555:HG3_PB_pbsv_4540:HG4_Ill_scalpel_4474:HG4_Ill_Krunchall_6873:HG4_Ill_GATKHC_7844:HG4_Ill_GATKHCSBGrefine_3287:HG4_Ill_150bpfermikitraw_6250:HG3_PB_assemblyticsfalcon_19635:HG3_Ill_svaba_6059:HG3_Ill_scalpel_4643:HG3_Ill_Krunchall_6501:HG3_Ill_GATKHC_7784:HG3_Ill_GATKHCSBGrefine_3116:HG3_Ill_FB_4246:HG3_Ill_150bpfermikitraw_6100:HG2_Ill_scalpel_4561:HG2_Ill_SpiralSDKrefine_12403:HG2_Ill_Krunchall_6609:HG2_Ill_GATKHC_7769:HG2_Ill_GATKHCSBGrefine_3128:HG2_Ill_150bpfermikitraw_6031:HG2_PB_assemblyticsPBcR_19043:HG3_PB_HySA_7165:HG2_PB_assemblyticsfalcon_19680;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6031:HG2_Ill_GATKHCSBGrefine_3128:HG2_Ill_GATKHC_7769:HG2_Ill_Krunchall_6609:HG2_Ill_SpiralSDKrefine_12403:HG2_Ill_scalpel_4561:HG3_Ill_150bpfermikitraw_6100:HG3_Ill_FB_4246:HG3_Ill_GATKHCSBGrefine_3116:HG3_Ill_GATKHC_7784:HG3_Ill_Krunchall_6501:HG3_Ill_scalpel_4643:HG3_Ill_svaba_6059:HG3_PB_assemblyticsfalcon_19635:HG4_Ill_150bpfermikitraw_6250:HG4_Ill_GATKHCSBGrefine_3287:HG4_Ill_GATKHC_7844:HG4_Ill_Krunchall_6873:HG4_Ill_scalpel_4474;NumExactMatchSVs=19;ClusterMaxShiftDist=0.189474;ClusterMaxSizeDiff=0.189474;ClusterMaxEditDist=0.210526;PBcalls=5;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=-69;DistForward=29125;DistMin=-69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=62;REFWIDENED=4:82772687-82772798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2828.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:31:0|1:11:0:2:31:./.:0:0:0:0:0/1:23:8:./.:.:.:.:.:.
chr4	82929300	HG2_PB_SVrefine2Falcon1plusDovetail_8828	TAAGAAATAAATGATGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCCATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCGTGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCCAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCCTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCCCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATTATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_634:HG4_Ill_Krunchall_6875:HG2_Ill_Krunchall_6612:HG3_PB_assemblyticsfalcon_19638:HG2_PB_assemblyticsPBcR_19046:HG4_10X_allpass_863:HG2_10X_allpass_735:HG2_Ill_tnscope_497:HG4_PB_pbsv_4686:HG4_PB_SVrefine2PBcRDovetail_2387:HG4_Ill_MetaSV_3797:HG4_Ill_GATKHCSBGrefine_3288:HG3_PB_SVrefine2Falcon1Dovetail_2877:HG2_PB_pbsv_4647:HG2_PB_assemblyticsfalcon_19683:HG2_PB_SVrefine2PBcRplusDovetail_8199:HG2_PB_SVrefine2PB10Xhap12_3386:HG2_PB_SVrefine2Falcon2Bionano_2232:HG2_PB_SVrefine2Falcon1plusDovetail_8828:HG2_Ill_MetaSV_3611:HG2_Ill_GATKHCSBGrefine_3129:HG2_10X_SVrefine210Xhap12_3408;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3408:HG2_Ill_GATKHCSBGrefine_3129:HG2_Ill_MetaSV_3611:HG2_PB_SVrefine2Falcon1plusDovetail_8828:HG2_PB_SVrefine2Falcon2Bionano_2232:HG2_PB_SVrefine2PB10Xhap12_3386:HG2_PB_SVrefine2PBcRplusDovetail_8199:HG2_PB_assemblyticsfalcon_19683:HG2_PB_pbsv_4647:HG3_PB_SVrefine2Falcon1Dovetail_2877:HG4_Ill_GATKHCSBGrefine_3288:HG4_Ill_MetaSV_3797:HG4_PB_SVrefine2PBcRDovetail_2387:HG4_PB_pbsv_4686;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0119818;ClusterMaxSizeDiff=0.0119818;ClusterMaxEditDist=0.0119818;PBcalls=11;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2091;DistBack=10014;DistForward=15554;DistMin=10014;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:82929301-82931404;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2829.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:45:./.:41:4:10:22:./.:0:0:0:0:0/1:28:21:0/1:175:80:2272:.:.
chr4	83143741	HG4_Ill_SVrefine2DISCOVARDovetail_3556	TATATATGTGTATATATATGTATATATAGATATATACATATATATGTGTGTGTATATATGTATATATAGATATATACATATATGTGTGTGTATATATGTATATATAGATATATACATATATGTGTGTGTATATATGTATATATAGATATATAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3409:HG3_PB_HySA_7169:HG4_PB_SVrefine2Falcon1Dovetail_2853:HG4_Ill_svaba_6072:HG4_Ill_GATKHC_7849:HG4_Ill_GATKHCSBGrefine_3289:HG3_Ill_svaba_6064:HG3_Ill_GATKHC_7788:HG3_Ill_GATKHCSBGrefine_3117:HG3_Ill_250bpfermikitraw_6288:HG3_Ill_150bpfermikitraw_6105:HG2_Ill_svaba_5946:HG2_Ill_GATKHC_7774:HG4_PB_assemblyticsfalcon_19259:HG2_PB_pbsv_4648:HG4_PB_pbsv_4687:HG3_PB_pbsv_4542:HG4_PB_SVrefine2PBcRDovetail_2388:HG4_Ill_SVrefine2DISCOVARDovetail_3556:HG3_PB_SVrefine2PBcRDovetail_2113:HG3_PB_SVrefine2Falcon1Dovetail_2878:HG3_Ill_SVrefine2DISCOVARDovetail_3582:HG2_PB_SVrefine2PBcRplusDovetail_8200:HG2_PB_SVrefine2PB10Xhap12_3387:HG2_PB_SVrefine2Falcon2Bionano_2233:HG2_PB_SVrefine2Falcon1plusDovetail_8829:HG2_Ill_SVrefine2DISCOVARplusDovetail_9557;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3409:HG4_PB_SVrefine2PBcRDovetail_2388:HG4_Ill_SVrefine2DISCOVARDovetail_3556:HG3_PB_SVrefine2PBcRDovetail_2113:HG3_PB_SVrefine2Falcon1Dovetail_2878:HG3_Ill_SVrefine2DISCOVARDovetail_3582:HG2_PB_SVrefine2PBcRplusDovetail_8200:HG2_PB_SVrefine2PB10Xhap12_3387:HG2_PB_SVrefine2Falcon2Bionano_2233:HG2_PB_SVrefine2Falcon1plusDovetail_8829:HG2_Ill_SVrefine2DISCOVARplusDovetail_9557;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0536913;ClusterMaxSizeDiff=0.0536913;ClusterMaxEditDist=0.0671141;PBcalls=13;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-152;DistBack=7725;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=288;REFWIDENED=4:83143742-83144181;PctSeqSimilarity=0.9333;PctSizeSimilarity=0.9474;PctRecOverlap=0.4902;SizeDiff=8;StartDistance=-78;EndDistance=-70;GTMatch=0;TruScore=79;MatchId=2830.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:43:0|1:22:6:2:34:./.:0:0:0:0:0/1:47:11:./.:.:.:.:.:.
chr4	83179778	HG3_PB_SVrefine2Falcon1Dovetail_2879	TAAAAATTCACATATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3388:HG3_Ill_Krunchall_6506:HG2_Ill_Krunchall_6615:HG2_PB_pbsv_4649:HG2_PB_PB10Xdip_22655:HG2_PB_assemblyticsPBcR_19050:HG3_Ill_MetaSV_3783:HG2_Ill_tnscope_498:HG2_Ill_MetaSV_3612:HG3_PB_pbsv_4543:HG3_PB_assemblyticsfalcon_19642:HG3_PB_SVrefine2Falcon1Dovetail_2879:HG3_Ill_manta_1063:HG3_Ill_SVrefine2DISCOVARDovetail_3583:HG3_Ill_GATKHCSBGrefine_3118:HG3_10X_allpass_899:HG2_PB_assemblyticsfalcon_19687:HG2_PB_SVrefine2Falcon2Bionano_2234:HG2_PB_SVrefine2Falcon1plusDovetail_8830:HG2_Ill_manta_1298:HG2_Ill_breakscan11_635:HG2_Ill_GATKHCSBGrefine_3130:HG2_10X_allpass_736:HG2_10X_SVrefine210Xhap12_3410:HG2_PB_SVrefine2PBcRplusDovetail_8201;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3410:HG2_10X_allpass_736:HG2_Ill_GATKHCSBGrefine_3130:HG2_Ill_breakscan11_635:HG2_Ill_manta_1298:HG2_PB_SVrefine2Falcon1plusDovetail_8830:HG2_PB_SVrefine2Falcon2Bionano_2234:HG2_PB_assemblyticsfalcon_19687:HG3_10X_allpass_899:HG3_Ill_GATKHCSBGrefine_3118:HG3_Ill_SVrefine2DISCOVARDovetail_3583:HG3_Ill_manta_1063:HG3_PB_SVrefine2Falcon1Dovetail_2879:HG3_PB_assemblyticsfalcon_19642:HG3_PB_pbsv_4543;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0323625;ClusterMaxSizeDiff=0.0323625;ClusterMaxEditDist=0.0324675;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=35752;DistForward=-40;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:83179779-83180103;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2831.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:0|1:30:1:0:27:./.:0:0:0:0:0/1:32:26:0/1:13:12:.:.:.
chr4	83395508	HG4_10X_allpass_864	AGCCAGAAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGTCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3411:HG2_PB_assemblyticsfalcon_19691:HG2_Ill_breakscan11_636:HG4_PB_pbsv_4689:HG3_Ill_MetaSV_3784:HG2_Ill_tnscope_499:HG4_Ill_scalpel_4481:HG4_Ill_manta_1155:HG4_Ill_SVrefine2DISCOVARDovetail_3559:HG4_Ill_GATKHCSBGrefine_3290:HG4_10X_allpass_864:HG3_PB_pbsv_4545:HG3_PB_SVrefine2PBcRDovetail_2115:HG3_Ill_manta_1064:HG3_Ill_GATKHCSBGrefine_3119:HG3_10X_allpass_900:HG2_PB_pbsv_4652:HG2_PB_SVrefine2PB10Xhap12_3389:HG2_PB_SVrefine2Falcon1plusDovetail_8831:HG2_Ill_manta_1299:HG2_Ill_SVrefine2DISCOVARplusDovetail_9560:HG2_Ill_GATKHCSBGrefine_3132:HG2_10X_allpass_737;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3411:HG4_Ill_scalpel_4481:HG4_Ill_manta_1155:HG4_Ill_SVrefine2DISCOVARDovetail_3559:HG4_Ill_GATKHCSBGrefine_3290:HG4_10X_allpass_864:HG3_PB_pbsv_4545:HG3_PB_SVrefine2PBcRDovetail_2115:HG3_Ill_manta_1064:HG3_Ill_GATKHCSBGrefine_3119:HG3_10X_allpass_900:HG2_PB_pbsv_4652:HG2_PB_SVrefine2PB10Xhap12_3389:HG2_PB_SVrefine2Falcon1plusDovetail_8831:HG2_Ill_manta_1299:HG2_Ill_SVrefine2DISCOVARplusDovetail_9560:HG2_Ill_GATKHCSBGrefine_3132:HG2_10X_allpass_737;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0792393;ClusterMaxSizeDiff=0.0792393;ClusterMaxEditDist=0.0792393;PBcalls=7;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=50537;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:83395509-83395842;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2832.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:36:0|1:32:0:0:34:./.:0:0:0:0:0/1:34:19:0/1:16:5:.:.:.
chr4	84221708	HG3_Ill_svaba_6075	TAAGAATTATTACACTTTGGGAGGACGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCCATCCGGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_5103:HG3_PB_assemblyticsfalcon_19655:HG2_PB_assemblyticsPBcR_19066:HG4_Ill_Krunchall_6887:HG2_Ill_Krunchall_6629:HG4_PB_assemblyticsfalcon_19271:HG2_PB_assemblyticsfalcon_19703:HG3_PB_pbsv_4558:HG3_PB_HySA_7183:HG4_Ill_MetaSV_3799:HG3_Ill_MetaSV_3787:HG2_Ill_tnscope_500:HG2_Ill_MetaSV_3614:HG4_PB_pbsv_4695:HG4_PB_SVrefine2Falcon1Dovetail_2857:HG4_Ill_svaba_6082:HG4_Ill_scalpel_4490:HG4_Ill_manta_1157:HG4_Ill_SVrefine2DISCOVARDovetail_3566:HG4_Ill_GATKHCSBGrefine_3293:HG4_10X_allpass_865:HG3_PB_SVrefine2PBcRDovetail_2118:HG3_PB_SVrefine2Falcon1Dovetail_2883:HG3_Ill_svaba_6075:HG3_Ill_scalpel_4659:HG3_Ill_manta_1066:HG3_Ill_SVrefine2DISCOVARDovetail_3594:HG3_Ill_GATKHCSBGrefine_3123:HG3_10X_allpass_901:HG2_PB_pbsv_4660:HG2_PB_SVrefine2PBcRplusDovetail_8205:HG2_PB_SVrefine2PB10Xhap12_3392:HG2_PB_SVrefine2Falcon2Bionano_2239:HG2_PB_SVrefine2Falcon1plusDovetail_8836:HG2_Ill_svaba_5958:HG2_Ill_scalpel_4578:HG2_Ill_manta_1300:HG2_Ill_SVrefine2DISCOVARplusDovetail_9567:HG2_Ill_GATKHCSBGrefine_3136:HG2_10X_SVrefine210Xhap12_3416:HG2_Ill_breakscan11_637;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3416:HG2_Ill_GATKHCSBGrefine_3136:HG2_Ill_SVrefine2DISCOVARplusDovetail_9567:HG2_Ill_manta_1300:HG2_Ill_scalpel_4578:HG2_Ill_svaba_5958:HG2_PB_SVrefine2Falcon1plusDovetail_8836:HG2_PB_SVrefine2Falcon2Bionano_2239:HG2_PB_SVrefine2PB10Xhap12_3392:HG2_PB_SVrefine2PBcRplusDovetail_8205:HG2_PB_pbsv_4660:HG3_10X_allpass_901:HG3_Ill_GATKHCSBGrefine_3123:HG3_Ill_SVrefine2DISCOVARDovetail_3594:HG3_Ill_manta_1066:HG3_Ill_scalpel_4659:HG3_Ill_svaba_6075:HG3_PB_SVrefine2Falcon1Dovetail_2883:HG3_PB_SVrefine2PBcRDovetail_2118:HG4_10X_allpass_865:HG4_Ill_GATKHCSBGrefine_3293:HG4_Ill_SVrefine2DISCOVARDovetail_3566:HG4_Ill_manta_1157:HG4_Ill_scalpel_4490:HG4_Ill_svaba_6082:HG4_PB_SVrefine2Falcon1Dovetail_2857:HG4_PB_pbsv_4695;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0748663;ClusterMaxSizeDiff=0.0748663;ClusterMaxEditDist=0.075;PBcalls=15;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-285;DistBack=24501;DistForward=-275;DistMin=-275;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=4:84221709-84222004;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2833.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:2:24:0:11:./.:0:0:0:0:1/1:0:44:./.:.:.:.:.:.
chr4	86238976	HG2_Ill_GATKHCSBGrefine_3139	CATTCTAGAGTTTCAGTTGTATTACTTCATTTTGTGATTTGAGAAAACATTTCACTTCTGTTTTTTCTCTTTAAAATGAGAGA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_4563:HG3_Ill_Cortex_2697:HG2_Ill_Cortex_6365:HG3_Ill_svaba_6088:HG3_Ill_scalpel_4667:HG3_Ill_manta_1067:HG3_Ill_Krunchall_6526:HG3_Ill_GATKHC_7814:HG3_Ill_GATKHCSBGrefine_3126:HG3_Ill_250bpfermikitraw_6309:HG3_Ill_150bpfermikitraw_6128:HG3_CG_vcfBeta_2677:HG3_10X_allpass_902:HG2_PB_pbsv_4666:HG2_Ill_svaba_5969:HG2_Ill_scalpel_4585:HG2_Ill_manta_1301:HG2_Ill_SpiralSDKrefine_12424:HG2_Ill_Krunchall_6642:HG2_Ill_GATKHC_7804:HG2_Ill_GATKHCSBGrefine_3139:HG2_Ill_250bpfermikitraw_6515:HG2_Ill_150bpfermikitraw_6058:HG2_CG_vcfBeta_2749;NumClusterSVs=24;ExactMatchIDs=HG2_CG_vcfBeta_2749:HG2_Ill_150bpfermikitraw_6058:HG2_Ill_250bpfermikitraw_6515:HG2_Ill_GATKHCSBGrefine_3139:HG2_Ill_GATKHC_7804:HG2_Ill_Krunchall_6642:HG2_Ill_SpiralSDKrefine_12424:HG2_Ill_manta_1301:HG2_Ill_scalpel_4585:HG2_Ill_svaba_5969:HG2_PB_pbsv_4666:HG3_10X_allpass_902:HG3_CG_vcfBeta_2677:HG3_Ill_150bpfermikitraw_6128:HG3_Ill_250bpfermikitraw_6309:HG3_Ill_GATKHCSBGrefine_3126:HG3_Ill_GATKHC_7814:HG3_Ill_Krunchall_6526:HG3_Ill_manta_1067:HG3_Ill_scalpel_4667:HG3_Ill_svaba_6088;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0493827;ClusterMaxSizeDiff=0.0493827;ClusterMaxEditDist=0.119048;PBcalls=2;Illcalls=19;TenXcalls=1;CGcalls=2;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=2;HG2count=12;HG3count=12;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-82;DistBack=437136;DistForward=-79;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=4:86238977-86239061;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2834.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:38:0|1:37:4:1:33:./.:0:0:0:0:0/1:38:32:./.:.:.:.:.:.
chr4	86310519	HG2_PB_SVrefine2PB10Xhap12_3394	TCCATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTTCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_325:HG2_PB_assemblyticsPBcR_19076:HG4_PB_assemblyticsfalcon_19279:HG2_PB_assemblyticsfalcon_19717:HG4_Ill_Krunchall_6898:HG2_Ill_Krunchall_6644:HG3_PB_assemblyticsfalcon_19662:HG3_Ill_MetaSV_3789:HG2_PB_HySA_8786:HG2_Ill_tnscope_501:HG2_Ill_MetaSV_3615:HG4_PB_pbsv_4700:HG4_PB_SVrefine2Falcon1Dovetail_2859:HG4_Ill_scalpel_4500:HG4_Ill_manta_1158:HG4_Ill_MetaSV_3800:HG4_Ill_GATKHCSBGrefine_3294:HG4_10X_allpass_866:HG3_PB_pbsv_4564:HG3_PB_SVrefine2Falcon1Dovetail_2885:HG3_Ill_scalpel_4669:HG3_Ill_manta_1068:HG3_Ill_GATKHCSBGrefine_3127:HG3_10X_allpass_903:HG2_PB_pbsv_4667:HG2_PB_SVrefine2PBcRplusDovetail_8208:HG2_PB_SVrefine2PB10Xhap12_3394:HG2_PB_SVrefine2Falcon2Bionano_2241:HG2_PB_SVrefine2Falcon1plusDovetail_8838:HG2_Ill_scalpel_4587:HG2_Ill_manta_1302:HG2_Ill_SpiralSDKrefine_12425:HG2_Ill_SVrefine2DISCOVARplusDovetail_9576:HG2_Ill_GATKHCSBGrefine_3140:HG2_10X_SVrefine210Xhap12_3421;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3421:HG2_Ill_GATKHCSBGrefine_3140:HG2_Ill_SVrefine2DISCOVARplusDovetail_9576:HG2_Ill_SpiralSDKrefine_12425:HG2_Ill_manta_1302:HG2_Ill_scalpel_4587:HG2_PB_SVrefine2Falcon1plusDovetail_8838:HG2_PB_SVrefine2Falcon2Bionano_2241:HG2_PB_SVrefine2PB10Xhap12_3394:HG2_PB_SVrefine2PBcRplusDovetail_8208:HG2_PB_pbsv_4667:HG3_10X_allpass_903:HG3_Ill_GATKHCSBGrefine_3127:HG3_Ill_manta_1068:HG3_Ill_scalpel_4669:HG3_PB_SVrefine2Falcon1Dovetail_2885:HG3_PB_pbsv_4564:HG4_10X_allpass_866:HG4_Ill_GATKHCSBGrefine_3294:HG4_Ill_MetaSV_3800:HG4_Ill_manta_1158:HG4_Ill_scalpel_4500:HG4_PB_SVrefine2Falcon1Dovetail_2859:HG4_PB_pbsv_4700;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0486224;ClusterMaxSizeDiff=0.0486224;ClusterMaxEditDist=0.0486224;PBcalls=14;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=22493;DistForward=-288;DistMin=-288;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=4:86310520-86310838;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2835.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:65:1/1:6:20:0:31:./.:0:0:0:0:1/1:0:42:0/1:2:13:.:.:.
chr4	86564378	HG3_PB_SVrefine2Falcon1Dovetail_2887	TTTTTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_19285:HG3_PB_assemblyticsfalcon_19668:HG2_PB_assemblyticsPBcR_19081:HG2_10X_allpass_738:HG2_PB_assemblyticsfalcon_19720:HG3_Ill_MetaSV_3792:HG2_Ill_MetaSV_3617:HG4_Ill_GATKHCSBGrefine_3297:HG4_10X_allpass_867:HG3_PB_pbsv_4567:HG3_Ill_GATKHCSBGrefine_3130:HG3_10X_allpass_904:HG2_PB_pbsv_4671:HG2_PB_HySA_8793:HG2_Ill_manta_1304:HG2_Ill_SVrefine2DISCOVARplusDovetail_9579:HG2_Ill_GATKHCSBGrefine_3142:HG4_PB_pbsv_4704:HG4_Ill_Spiral_383:HG3_Ill_Spiral_5114:HG2_Ill_Spiral_326:HG2_Ill_SpiralSDKrefine_12430:HG4_PB_HySA_7002:HG4_PB_SVrefine2PBcRDovetail_2391:HG4_Ill_SVrefine2DISCOVARDovetail_3575:HG3_PB_SVrefine2Falcon1Dovetail_2887:HG3_Ill_SVrefine2DISCOVARDovetail_3602:HG2_PB_SVrefine2PBcRplusDovetail_8209:HG2_PB_SVrefine2PB10Xhap12_3395:HG2_PB_SVrefine2Falcon2Bionano_2243:HG2_PB_SVrefine2Falcon1plusDovetail_8839:HG2_Ill_tnscope_502:HG2_Ill_SVrefine2DISCOVARplusDovetail_9578:HG2_10X_SVrefine210Xhap12_3423:HG4_Ill_Krunchall_6908:HG2_Ill_Krunchall_6652:HG3_Ill_MetaSV_3791:HG2_Ill_MetaSV_3616:HG4_PB_SVrefine2Falcon1Dovetail_2861;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3423:HG2_Ill_SVrefine2DISCOVARplusDovetail_9578:HG2_Ill_tnscope_502:HG2_PB_SVrefine2Falcon1plusDovetail_8839:HG2_PB_SVrefine2Falcon2Bionano_2243:HG2_PB_SVrefine2PB10Xhap12_3395:HG2_PB_SVrefine2PBcRplusDovetail_8209:HG3_Ill_SVrefine2DISCOVARDovetail_3602:HG3_PB_SVrefine2Falcon1Dovetail_2887:HG4_Ill_SVrefine2DISCOVARDovetail_3575:HG4_PB_SVrefine2PBcRDovetail_2391;NumExactMatchSVs=11;ClusterMaxShiftDist=0.121766;ClusterMaxSizeDiff=0.121766;ClusterMaxEditDist=0.140299;PBcalls=16;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=-492;DistForward=-309;DistMin=-492;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:86564379-86564724;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.997;PctRecOverlap=0.979;SizeDiff=1;StartDistance=-7;EndDistance=-6;GTMatch=0;TruScore=98;MatchId=2837.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:68:1/1:2:14:0:20:./.:0:0:0:0:1/1:0:29:0/1:3:15:.:.:.
chr4	86660755	HG4_Ill_GATKHCSBGrefine_3298	TCCACGTTCAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_639:HG3_PB_assemblyticsfalcon_19671:HG2_PB_assemblyticsPBcR_19083:HG4_PB_assemblyticsfalcon_19289:HG2_PB_assemblyticsfalcon_19723:HG4_Ill_Krunchall_6910:HG3_Ill_Krunchall_6532:HG2_Ill_Krunchall_6654:HG4_PB_HySA_7004:HG3_PB_HySA_7209:HG2_PB_HySA_8797:HG4_Ill_MetaSV_3802:HG3_Ill_MetaSV_3794:HG2_Ill_tnscope_503:HG2_Ill_MetaSV_3619:HG4_PB_pbsv_4705:HG4_PB_SVrefine2PBcRDovetail_2392:HG4_PB_SVrefine2Falcon1Dovetail_2863:HG4_Ill_scalpel_4505:HG4_Ill_manta_1160:HG4_Ill_SVrefine2DISCOVARDovetail_3576:HG4_Ill_GATKHCSBGrefine_3298:HG4_10X_allpass_868:HG3_PB_pbsv_4570:HG3_PB_SVrefine2PBcRDovetail_2122:HG3_PB_SVrefine2Falcon1Dovetail_2889:HG3_Ill_scalpel_4672:HG3_Ill_manta_1069:HG3_Ill_SVrefine2DISCOVARDovetail_3603:HG3_Ill_GATKHCSBGrefine_3132:HG3_10X_allpass_905:HG2_PB_pbsv_4673:HG2_PB_SVrefine2PBcRplusDovetail_8210:HG2_PB_SVrefine2PB10Xhap12_3396:HG2_PB_SVrefine2Falcon2Bionano_2244:HG2_PB_SVrefine2Falcon1plusDovetail_8840:HG2_Ill_scalpel_4591:HG2_Ill_manta_1305:HG2_Ill_SVrefine2DISCOVARplusDovetail_9580:HG2_Ill_GATKHCSBGrefine_3144:HG2_10X_allpass_739:HG2_10X_SVrefine210Xhap12_3424;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3424:HG2_10X_allpass_739:HG2_Ill_GATKHCSBGrefine_3144:HG2_Ill_SVrefine2DISCOVARplusDovetail_9580:HG2_Ill_manta_1305:HG2_Ill_scalpel_4591:HG2_PB_SVrefine2Falcon1plusDovetail_8840:HG2_PB_SVrefine2Falcon2Bionano_2244:HG2_PB_SVrefine2PB10Xhap12_3396:HG2_PB_SVrefine2PBcRplusDovetail_8210:HG2_PB_pbsv_4673:HG3_10X_allpass_905:HG3_Ill_GATKHCSBGrefine_3132:HG3_Ill_SVrefine2DISCOVARDovetail_3603:HG3_Ill_manta_1069:HG3_Ill_scalpel_4672:HG3_PB_SVrefine2Falcon1Dovetail_2889:HG3_PB_SVrefine2PBcRDovetail_2122:HG3_PB_pbsv_4570:HG4_10X_allpass_868:HG4_Ill_GATKHCSBGrefine_3298:HG4_Ill_SVrefine2DISCOVARDovetail_3576:HG4_Ill_manta_1160:HG4_Ill_scalpel_4505:HG4_PB_SVrefine2Falcon1Dovetail_2863:HG4_PB_SVrefine2PBcRDovetail_2392:HG4_PB_pbsv_4705;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0853081;ClusterMaxSizeDiff=0.0853081;ClusterMaxEditDist=0.0853081;PBcalls=18;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=-323;DistForward=-309;DistMin=-323;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:86660756-86661091;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2838.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:88:1/1:1:47:1:21:./.:0:0:0:0:1/1:0:20:0/1:2:9:.:.:.
chr4	87066353	HG4_Ill_GATKHCSBGrefine_3300	CAAATTTCTATCTCTAGCCGGGCGTGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCTACAGAGCGAGACACCGTCTCAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_640:HG4_PB_assemblyticsfalcon_19296:HG4_Ill_Krunchall_6912:HG2_Ill_Krunchall_6659:HG2_PB_SVrefine2PB10Xhap12_3398:HG2_PB_PB10Xdip_22661:HG2_PB_pbsv_4674:HG4_Ill_MetaSV_3804:HG2_PB_HySA_8799:HG4_PB_pbsv_4709:HG4_PB_SVrefine2PBcRDovetail_2395:HG4_Ill_svaba_6104:HG4_Ill_scalpel_4507:HG4_Ill_manta_1161:HG4_Ill_SVrefine2DISCOVARDovetail_3578:HG4_Ill_GATKHCSBGrefine_3300:HG4_Ill_250bpfermikitraw_6580:HG4_Ill_150bpfermikitraw_6288:HG4_10X_allpass_869:HG3_PB_SVrefine2Falcon1Dovetail_2892:HG2_PB_SVrefine2PB10Xhap12_3397:HG2_PB_SVrefine2Falcon2Bionano_2245:HG2_Ill_svaba_5980:HG2_Ill_manta_1306:HG2_Ill_SpiralSDKrefine_12434:HG2_Ill_SVrefine2DISCOVARplusDovetail_9581:HG2_Ill_MetaSV_3620:HG2_Ill_GATKHCSBGrefine_3145:HG2_10X_SVrefine210Xhap12_3425;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3425:HG2_Ill_GATKHCSBGrefine_3145:HG2_Ill_MetaSV_3620:HG2_Ill_SVrefine2DISCOVARplusDovetail_9581:HG2_Ill_SpiralSDKrefine_12434:HG2_Ill_manta_1306:HG2_Ill_svaba_5980:HG2_PB_SVrefine2Falcon2Bionano_2245:HG2_PB_SVrefine2PB10Xhap12_3397:HG3_PB_SVrefine2Falcon1Dovetail_2892:HG4_10X_allpass_869:HG4_Ill_150bpfermikitraw_6288:HG4_Ill_250bpfermikitraw_6580:HG4_Ill_GATKHCSBGrefine_3300:HG4_Ill_SVrefine2DISCOVARDovetail_3578:HG4_Ill_manta_1161:HG4_Ill_scalpel_4507:HG4_Ill_svaba_6104:HG4_PB_SVrefine2PBcRDovetail_2395:HG4_PB_pbsv_4709;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0949721;ClusterMaxSizeDiff=0.0949721;ClusterMaxEditDist=0.0949721;PBcalls=10;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-182;DistBack=13;DistForward=-174;DistMin=-174;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:87066354-87066550;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2839.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:36:0|1:38:0:1:34:./.:0:0:0:0:0/1:18:22:./.:.:.:.:.:.
chr4	87095092	HG2_Ill_150bpfermikitraw_6070	CAGAATGGCAATAATTAAAAATTCAAGAAACAATAGATGCTGGCAAGGCTGCAGAGAAATA	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6070:HG3_PB_HySA_7215:HG2_PB_HySA_8800:HG2_PB_assemblyticsfalcon_19729:HG4_PB_assemblyticsfalcon_19297:HG4_Ill_svaba_6105:HG4_Ill_scalpel_4508:HG4_Ill_manta_1162:HG4_Ill_Krunchall_6913:HG4_Ill_GATKHC_7885:HG4_Ill_GATKHCSBGrefine_3301:HG4_Ill_250bpfermikitraw_6581:HG4_Ill_150bpfermikitraw_6289:HG4_CG_vcfBeta_3112:HG3_PB_pbsv_4573:HG3_Ill_svaba_6101:HG3_Ill_manta_1072:HG3_Ill_Krunchall_6536:HG3_Ill_GATKHC_7825:HG3_Ill_GATKHCSBGrefine_3134:HG3_Ill_250bpfermikitraw_6317:HG3_Ill_150bpfermikitraw_6139:HG3_CG_vcfBeta_2681:HG3_10X_allpass_906:HG2_PB_pbsv_4675:HG2_PB_assemblyticsPBcR_19086:HG2_Ill_svaba_5981:HG2_Ill_scalpel_4593:HG2_Ill_manta_1307:HG2_Ill_SpiralSDKrefine_12435:HG2_Ill_Krunchall_6660:HG2_Ill_GATKHC_7816:HG2_Ill_GATKHCSBGrefine_3146:HG2_Ill_250bpfermikitraw_6528;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6070:HG4_PB_assemblyticsfalcon_19297:HG4_Ill_svaba_6105:HG4_Ill_scalpel_4508:HG4_Ill_manta_1162:HG4_Ill_Krunchall_6913:HG4_Ill_GATKHC_7885:HG4_Ill_GATKHCSBGrefine_3301:HG4_Ill_250bpfermikitraw_6581:HG4_Ill_150bpfermikitraw_6289:HG4_CG_vcfBeta_3112:HG3_PB_pbsv_4573:HG3_Ill_svaba_6101:HG3_Ill_manta_1072:HG3_Ill_Krunchall_6536:HG3_Ill_GATKHC_7825:HG3_Ill_GATKHCSBGrefine_3134:HG3_Ill_250bpfermikitraw_6317:HG3_Ill_150bpfermikitraw_6139:HG3_CG_vcfBeta_2681:HG3_10X_allpass_906:HG2_PB_pbsv_4675:HG2_PB_assemblyticsPBcR_19086:HG2_Ill_svaba_5981:HG2_Ill_scalpel_4593:HG2_Ill_manta_1307:HG2_Ill_SpiralSDKrefine_12435:HG2_Ill_Krunchall_6660:HG2_Ill_GATKHC_7816:HG2_Ill_GATKHCSBGrefine_3146:HG2_Ill_250bpfermikitraw_6528;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0325203;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.0491803;PBcalls=7;Illcalls=24;TenXcalls=1;CGcalls=2;PBexactcalls=4;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=2;HG2count=13;HG3count=11;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-60;DistBack=28575;DistForward=63093;DistMin=28575;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=4:87095093-87095158;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2840.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:56:1/1:1:6:0:11:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr4	87646391	HG2_10X_SVrefine210Xhap12_3427	TTCATGTCTTCGCTATTGTGAACAGTGCTGCAATAAACATACATGTGCATGTGTCTTTATGGTAGCGTGATTTATAATCCTTTGGGTATATACCCAGTAATAGGATCGCTGGGTCAAATGGTGTTTCTAGTTCTAGATTCTTGAGTAATCGCCACACTGTCTTCCACAAAGGTTGAACTACTTTACGCTCCCACCAACAGTGTAAAAGCGTTCCTATTTCTCCACATCCTCTCCAGCATCTGTTGTTTCCTGACTTTTTAATGATTGCTTTTCTAACTGGCATGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGACCAGTGATGATGAGCATTTTTTCATGTGTCTGTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTTGCCTGTTTTTCAGTGGGGTTGTTTGTTTGTTTCTTGTAAATTTGTTGAAGTTCTTTGTAGATTCTGGATATTAGCCTTTTGTCAGATGGGTAGATTGCAAAAATTTTCTCCCATTCTGTAGGTTGCCTGTTCACGCTGATGGTAGTTTCTTTTGCCATACAGACACTCTTTAGTTTAATTAGATACTGTTTGTCTATTTTGGCTTTCGTTGCCATTGCTTTTGGTGTGTTAGTCATGAAGTCCTTACCCATCCCCATGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGATTTTTATGGCTTTAGGTCTAACATTTAAGTCCTTAATCCATTGTGAATTAATTTTTGTATAAGGTGGAAGGAAGGGATCCAGTTTCAGTTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATGTATTAAATAGGGAATCCTTTCTACATTTCTTGTTTTTGTCAGGTTTGTCAAAGATCAGTTGGTTGTAGATGTGTGGTGTTATTTCTGAGGCCTCTGTTCTGTTCCATTGGTCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGACTTGTAGTATAGTTTGAAGTCAGGTAGCATGATGCCTCCAGCTTTGCTCTTTTTGCTTAGGATTGTCTTGGCTATGTGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCTTATTCTGGGAAGAAAGTCATTGGTAGTCTGATGGGGATGGTATTGAATCTATAAATTACTTTGGGCAGTATGGCCATTTTCATGATATTGATTCCTCCTATCCGTGAGCATGGAATTTTCTTCCATTTGTGTGTGTCTTTTATTTCGTTGAACAGTGGTTTGTAGTTCTGCTTGAAGAGGTCCTTTATATCCCTTGTAAGTTGAATTCCTAGGTATTTTATTTTCTTTGTAGTAATTGTGAATGGGAATTCACTCATGATTTGGCTGTTTGTCTGTTATTGGTGTAGAGAAATGTTTGTGATTTTTACACATTGATTTTGTATCCTGACACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTCGGGGCTGAGACGATGGGGTTTTCTAAATATACAATTATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCTTTCTCTTGCCTGATTGCCCTAACCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCTTGTCTTGTGCTGGATTTCAAAGGGAATGCTTCCAGTTTTTGTCCATTTAGTATGATATTGGCTGTGGGTTTGTCGTAAATAGCATTTATTATTTTGAAGTAAGTTCCACCAATACCTAGTTTATTGAGAGTTTTTAGCATGAAGGGCTGTTTAATTGTGTTAAAGGCCTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTAGTTGTTTCTGTTTATGTGTTGAATTACATTTATTGATTTGCCTATGTTGAACCAGCCTTGCATGCCAGGGATGAAGCCCACTTGATCCTGGTGGATAAGCTTTTTGGTGTGCTGCTGGATTTGGTTTGCTAGTATTTTATTGAGGATTTTCACATTGATGTTCATCAGGGATATTGGTCTAAAATTCTCTGTTTTTGTTGTGTCTCTGCCACACTTTGGTATCAGGACAATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTCATTGGAATAGTTTCAGAAGGAATGGTACCAGCTCCTCTTTGTACCTCTGGTAGAATTCGGCTGTCAGTCTCTCTGGTCTTGGACTTTTTTTGGTTGGTAGGCTATTAATTATTGCCTCAATTTCAGAGCCTGTTATTGGTCTAATCAGAGATTTGACTTCTTCATGGTTTAGTCTTGGGAGGGTGTATGTGTCCAGGAATTCATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTTTATAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGATGTTGATATCCCCTTTATCGTTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTCTTCTTTATTAGTCTTGCTAGCAGTACATCAATTTTGTTGATCTTTTCAAAAAACCAGCTCCTAAATTCATTGATTTTTTTGAAGGGTTTTTTCTGTCTCTATCTCCTTCAGTTCTGCTCTGATCTTAGTTATTTCTTGCCTTTTGCTAGCTTTTGAATTTGTTTGCTCTTGCTTCTCTAGTTCTTTTAATTGTGATGTTAGGGTGTTGATTTTATATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGTGTCCCAGAGATTCTGGTATGTTGTGTCTTCGTTCTCATTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTTGTTATATACCCAGTAGTCATTCAGGAGAAGGTTGTTCAGTTTCCATGCAGTTGTGCAGTTTTGAGTAAGTTTCTTAATCCCGAGCTCTAATTTGATTGCACTGTAGTCTGAGAGACCGTTTGTTGTGATTTCTGTTCTTTTACATTTGCTGAGTAGTGTTTTACTTCCAATTATGTGGTCAATTTTAGAATAAGTGTGATGTGGTGCTGAGAAGAATGTACATTCTGTTGATTTGGGGTGGTGAGTTCTGGATATGTCTATTAGGTCCACTTGTTGCAGAGCTGAGTTTAAGTCCTGGATATCCTTCTTAACCTTCTGTCTCCTTATCTGTCTAATACTGACAATGGAGTGTTAAAGTCTCCCATTATTATTGTGTGGGAGTCTAAGTCTCTTTGTAGGTCTCTAAGGACTTCCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAGGATAGTTAGCTCTTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTACAGTTTGTTTCATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGCTTGGTAGATCTTCCTATGTCCCTTTATTTTGAGCCTATGTGTTTCTCTGCACGTGAGATGGGTCTCCTGAATACAGCACACTGATGAGTCTTGACTCTTTATCCAATTTGCCAGTTTGTGTCTTTTAATTGGGGCATTTAGCCCATTTACATTTAAGGTTAACATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTATCTGGTTATTTTGCCTATTAATTGAGGCAGTTTCTTCCTAGCATCGATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACTGGTTGTTCCTATCCATGTTTAGTGCTTCCTTCAGGAATTTTTGTAAGGCAGGCCTGATGGTGACAAAATCTGTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTCCCCTTCACTTATGAAGCTTAGTTTGGCTGGATGTGAAATTATGGGTTGAAAATTATTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCGCTGTTAGTCTGATGGGCTTCCCTTTGTGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTACCATTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGTGTCTTGGGATTGTTCTTCTCAAGGAGTATCTTTGTGGTGTTCTCTTTATTTCCTGAATTTGAATGTTGACCTGCCTTTCTAGGTTGGAGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGATTCCATTTTCCCTGTCACTGTCAGGTACACCAATCAGATATAGATTTGGTCTTTTCACATATTCCGTGTTTCTTGGAGGCTTTGTTCGTTTCTTTTTACTATTTTTTCTCTAATCTTGTCTTCTCGCTTTATTTCATTAATTTGATCTTCAATCAGTGATACCCTTTCTTCCACTTGATCAAATCAGCTATTGAAACTTGTGCATGTGTCACAAAGTTCTTGTGCCATGGTTTTCTGCTCCATCAGGTCATTTAAGGTCTTCTCTACACTGTTTATTCTAGTTAGCCATTCCTCTAACCTTTTTGCAAGGTTTTTAGCTTCCTTGTGATGGGTTTGAACATGCTCCTTTAGCTCAGAGAAGTTTATTATTACCGACCTTCTGAAGCCTACTTCTGTCAACTTGCCAAAGTCATTCTCTGTCCAGCTTTGTTCGTTTGCTGGTGAGGAGCTGCAGTCCTTTGGAGGAGAAGAAGCACTCTGGTTTTTAGAATTTTCAGCTTTTCTGCTCTGTGGTTTTATTTACCTTTGGTCTTTGATGTTGGTGACCTACAGATGGGGTTTGGTGTAGATGTCCTTTTTGTTGATGTTGATGGTATTCCTTTCTGTTTGTTAATTTTTCTTCTAATAGTCAGATCCCTCAGCTGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTATCACCAGTGGATGCTGCAGAACAGCAAATATTGCTGCCTGATCTTTCCTCTGGAAGTTTTATCCCAGAGGGGCACCCAACCGTATGAGGTGTCTGTCAGCCTCTACTGGGAGGTGTCTCCCAGTTAGGCTACAGGGGTCATGGACCCATTCTCAGAGCTCAAACGCCATGCTGGGAGAACCACTGCTCTCTTCAGAGCTGTCAGACAGGGACATTTAAGTCTGCAGAAGTTTCTGCTTCCTTTTGTTCAGCTATGCCCTGGCCACAGAGGTGGAGTCTGTAGAGGAAGCAGGCCTTGCTGAGCTGCGGTGGGCTCCACCCACTTCGAGGTTCCCAGCCGTTTTGTTTACCTACTCAAGCCTCAGCAATGGCAGACATCCCTCCCCCGACCAGGCTGCAGCCTCGGAAGTTGATCTCAGATTGCTGCGCTAGCAGTGAGCAAGGCTTCGTGGGTGTGGGACCTGCTGAGCCAGGAACGGGAGAAAATCTGGTCTGCCACTTGCTAAGACTGTGAGAAAAGTGCAGTATTTGGGCGGGAGTGTTCCGTTTTTCCAGGTACAGTTTGTCTCAGCTTCCCTTGGCTAGGAAAGGGAAATCCCTCTATCCCTTGGGCTTCCTGGGTGAGGTGATGCCCCGTCCGGCTTCAGC	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3805:HG4_10X_allpass_870:HG2_PB_HySA_8805:HG2_PB_assemblyticsfalcon_19732:HG2_PB_assemblyticsPBcR_19088:HG4_PB_pbsv_4710:HG4_PB_SVrefine2PBcRDovetail_2396:HG3_PB_SVrefine2Falcon1Dovetail_2893:HG2_PB_pbsv_4676:HG2_PB_SVrefine2PBcRplusDovetail_8212:HG2_PB_SVrefine2PB10Xhap12_3399:HG2_PB_SVrefine2Falcon2Bionano_2246:HG2_PB_SVrefine2Falcon1plusDovetail_8842:HG2_Ill_MetaSV_3621:HG2_10X_SVrefine210Xhap12_3427:HG2_Ill_tnscope_504;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3427:HG2_Ill_MetaSV_3621:HG2_PB_SVrefine2Falcon1plusDovetail_8842:HG2_PB_SVrefine2Falcon2Bionano_2246:HG2_PB_SVrefine2PB10Xhap12_3399:HG2_PB_SVrefine2PBcRplusDovetail_8212:HG2_PB_pbsv_4676:HG3_PB_SVrefine2Falcon1Dovetail_2893:HG4_PB_SVrefine2PBcRDovetail_2396:HG4_PB_pbsv_4710;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0137956;ClusterMaxSizeDiff=0.0137956;ClusterMaxEditDist=0.0137956;PBcalls=11;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-5552;DistBack=6782;DistForward=-5552;DistMin=-5552;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=4:87646392-87651947;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2841.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:61:0|1:41:0:0:31:./.:0:0:0:0:0/1:51:16:0/1:383:192:5711:.:.
chr4	88032137	HG3_PB_SVrefine2PBcRDovetail_2125	CTACTTAAACTTTATTTTTTTTTTTTTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3430:HG3_PB_HySA_7221:HG2_PB_HySA_8809:HG4_PB_pbsv_4711:HG3_PB_pbsv_4576:HG2_PB_pbsv_4678:HG4_PB_HySA_7014:HG4_Ill_MetaSV_3806:HG3_Ill_MetaSV_3795:HG2_Ill_tnscope_505:HG2_Ill_MetaSV_3622:HG4_PB_SVrefine2PBcRDovetail_2397:HG4_PB_SVrefine2Falcon1Dovetail_2867:HG4_Ill_svaba_6114:HG4_Ill_scalpel_4512:HG4_Ill_manta_1163:HG4_Ill_SVrefine2DISCOVARDovetail_3579:HG4_Ill_GATKHCSBGrefine_3303:HG4_10X_allpass_871:HG3_PB_SVrefine2PBcRDovetail_2125:HG3_PB_SVrefine2Falcon1Dovetail_2894:HG3_Ill_svaba_6107:HG3_Ill_scalpel_4676:HG3_Ill_manta_1074:HG3_Ill_SVrefine2DISCOVARDovetail_3610:HG3_Ill_GATKHCSBGrefine_3138:HG3_10X_allpass_907:HG2_PB_SVrefine2PBcRplusDovetail_8213:HG2_PB_SVrefine2PB10Xhap12_3400:HG2_PB_SVrefine2Falcon2Bionano_2248:HG2_PB_SVrefine2Falcon1plusDovetail_8844:HG2_Ill_svaba_5988:HG2_Ill_scalpel_4597:HG2_Ill_manta_1308:HG2_Ill_SVrefine2DISCOVARplusDovetail_9585:HG2_Ill_GATKHCSBGrefine_3149:HG2_10X_allpass_740;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3430:HG4_PB_SVrefine2PBcRDovetail_2397:HG4_PB_SVrefine2Falcon1Dovetail_2867:HG4_Ill_svaba_6114:HG4_Ill_scalpel_4512:HG4_Ill_manta_1163:HG4_Ill_SVrefine2DISCOVARDovetail_3579:HG4_Ill_GATKHCSBGrefine_3303:HG4_10X_allpass_871:HG3_PB_SVrefine2PBcRDovetail_2125:HG3_PB_SVrefine2Falcon1Dovetail_2894:HG3_Ill_svaba_6107:HG3_Ill_scalpel_4676:HG3_Ill_manta_1074:HG3_Ill_SVrefine2DISCOVARDovetail_3610:HG3_Ill_GATKHCSBGrefine_3138:HG3_10X_allpass_907:HG2_PB_SVrefine2PBcRplusDovetail_8213:HG2_PB_SVrefine2PB10Xhap12_3400:HG2_PB_SVrefine2Falcon2Bionano_2248:HG2_PB_SVrefine2Falcon1plusDovetail_8844:HG2_Ill_svaba_5988:HG2_Ill_scalpel_4597:HG2_Ill_manta_1308:HG2_Ill_SVrefine2DISCOVARplusDovetail_9585:HG2_Ill_GATKHCSBGrefine_3149:HG2_10X_allpass_740;NumExactMatchSVs=27;ClusterMaxShiftDist=0.00902256;ClusterMaxSizeDiff=0.00902256;ClusterMaxEditDist=0.00902256;PBcalls=14;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=47756;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=337;REFWIDENED=4:88032138-88032806;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2842.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:65:1/1:1:22:0:25:./.:0:0:0:0:1/1:0:53:./.:2:16:.:.:.
chr4	88268243	HG2_PB_SVrefine2PB10Xhap12_3401	TTAGTATTCTGGATTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCACTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATATGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACAGTGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAAATTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTCCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCTC	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_6670:HG2_PB_assemblyticsPBcR_19095:HG4_PB_assemblyticsfalcon_19302:HG2_PB_assemblyticsfalcon_19740:HG3_10X_allpass_909:HG4_10X_allpass_872:HG4_PB_pbsv_4713:HG4_PB_SVrefine2PBcRDovetail_2398:HG4_PB_SVrefine2Falcon1Dovetail_2868:HG4_Ill_MetaSV_3808:HG3_PB_pbsv_4578:HG3_PB_SVrefine2PBcRDovetail_2126:HG3_PB_SVrefine2Falcon1Dovetail_2895:HG3_Ill_SVrefine2DISCOVARDovetail_3612:HG3_Ill_GATKHCSBGrefine_3140:HG2_PB_pbsv_4680:HG2_PB_SVrefine2PBcRplusDovetail_8215:HG2_PB_SVrefine2PB10Xhap12_3401:HG2_PB_SVrefine2Falcon2Bionano_2249:HG2_PB_SVrefine2Falcon1plusDovetail_8846:HG2_Ill_breakscan11_641:HG2_Ill_SpiralSDKrefine_12443:HG2_Ill_SVrefine2DISCOVARplusDovetail_9586:HG2_Ill_MetaSV_3626:HG2_Ill_GATKHCSBGrefine_3151:HG2_10X_SVrefine210Xhap12_3432:HG3_Ill_MetaSV_3797:HG2_Ill_tnscope_506:HG4_Ill_Krunchall_6926:HG3_Ill_Krunchall_6543;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3432:HG2_Ill_GATKHCSBGrefine_3151:HG2_Ill_MetaSV_3626:HG2_Ill_SVrefine2DISCOVARplusDovetail_9586:HG2_Ill_SpiralSDKrefine_12443:HG2_Ill_breakscan11_641:HG2_PB_SVrefine2Falcon1plusDovetail_8846:HG2_PB_SVrefine2Falcon2Bionano_2249:HG2_PB_SVrefine2PB10Xhap12_3401:HG2_PB_SVrefine2PBcRplusDovetail_8215:HG2_PB_pbsv_4680:HG3_Ill_GATKHCSBGrefine_3140:HG3_Ill_SVrefine2DISCOVARDovetail_3612:HG3_PB_SVrefine2Falcon1Dovetail_2895:HG3_PB_SVrefine2PBcRDovetail_2126:HG3_PB_pbsv_4578:HG4_Ill_MetaSV_3808:HG4_PB_SVrefine2Falcon1Dovetail_2868:HG4_PB_SVrefine2PBcRDovetail_2398;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0187254;ClusterMaxSizeDiff=0.0187254;ClusterMaxEditDist=0.0223152;PBcalls=14;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-6055;DistBack=-9322;DistForward=-6046;DistMin=-9322;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=4:88268244-88274315;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2843.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:59:0|1:29:2:0:28:./.:0:0:0:0:0/1:29:19:0/1:374:218:6334:.:.
chr4	88291560	HG2_PB_SVrefine2Falcon2Bionano_2250	ATATTATTATTATTATTATTATTTTTTGAGACGAAGTCTCTCTCTGTTGCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCCCCTGCCTCAGCCTCCCGACTAGCTGGGACTACAGGCACGTACCACACACCCAGCTAATTTTTTTTGTATTTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCGTGATCCGCTTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCTCCACGCCTGGCCTAGATATTATTATTATTATTATTATTAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3433:HG2_PB_HySA_8811:HG4_PB_pbsv_4714:HG4_PB_HySA_7016:HG3_PB_pbsv_4579:HG2_PB_pbsv_4681:HG3_PB_HySA_7224:HG3_Ill_MetaSV_3798:HG2_Ill_MetaSV_3627:HG4_Ill_scalpel_4515:HG4_Ill_MetaSV_3809:HG4_10X_allpass_873:HG3_Ill_scalpel_4679:HG3_Ill_GATKHCSBGrefine_3141:HG3_10X_allpass_910:HG2_Ill_scalpel_4599:HG2_Ill_GATKHCSBGrefine_3152:HG2_Ill_breakscan11_642:HG4_PB_SVrefine2PBcRDovetail_2399:HG4_PB_SVrefine2Falcon1Dovetail_2869:HG3_PB_SVrefine2PBcRDovetail_2127:HG3_PB_SVrefine2Falcon1Dovetail_2896:HG2_PB_SVrefine2PB10Xhap12_3402:HG2_PB_SVrefine2Falcon2Bionano_2250:HG2_PB_SVrefine2Falcon1plusDovetail_8847;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3433:HG4_PB_SVrefine2PBcRDovetail_2399:HG4_PB_SVrefine2Falcon1Dovetail_2869:HG3_PB_SVrefine2PBcRDovetail_2127:HG3_PB_SVrefine2Falcon1Dovetail_2896:HG2_PB_SVrefine2PB10Xhap12_3402:HG2_PB_SVrefine2Falcon2Bionano_2250:HG2_PB_SVrefine2Falcon1plusDovetail_8847;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0270677;ClusterMaxSizeDiff=0.0270677;ClusterMaxEditDist=0.141353;PBcalls=13;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-336;DistBack=23298;DistForward=-15;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=4:88291875-88301722;PctSeqSimilarity=0.9308;PctSizeSimilarity=0.9851;PctRecOverlap=0.0742;SizeDiff=5;StartDistance=-312;EndDistance=-307;GTMatch=0;TruScore=66;MatchId=2844.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:27:0|1:32:3:4:21:./.:0:0:0:0:0/0:76:0:0/0:48:2:.:.:.
chr4	88483883	HG4_Ill_SVrefine2DISCOVARDovetail_3582	TAAAAAGTTACAAACAACATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAATATTTTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_507:HG2_PB_pbsv_4683:HG4_10X_allpass_874:HG2_10X_allpass_741:HG4_PB_pbsv_4717:HG4_Ill_Krunchall_6930:HG2_Ill_Krunchall_6672:HG4_Ill_MetaSV_3810:HG4_PB_SVrefine2PBcRDovetail_2400:HG4_Ill_SVrefine2DISCOVARDovetail_3582:HG4_Ill_GATKHCSBGrefine_3307:HG2_PB_assemblyticsPBcR_19097:HG2_PB_SVrefine2PBcRplusDovetail_8216:HG2_PB_SVrefine2PB10Xhap12_3403:HG2_Ill_SVrefine2DISCOVARplusDovetail_9587:HG2_Ill_MetaSV_3628:HG2_Ill_GATKHCSBGrefine_3155:HG2_10X_SVrefine210Xhap12_3434:HG2_Ill_breakscan11_643;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3434:HG2_Ill_GATKHCSBGrefine_3155:HG2_Ill_MetaSV_3628:HG2_Ill_SVrefine2DISCOVARplusDovetail_9587:HG2_PB_SVrefine2PB10Xhap12_3403:HG2_PB_SVrefine2PBcRplusDovetail_8216:HG2_PB_assemblyticsPBcR_19097:HG4_Ill_GATKHCSBGrefine_3307:HG4_Ill_SVrefine2DISCOVARDovetail_3582:HG4_PB_SVrefine2PBcRDovetail_2400;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00826105;ClusterMaxSizeDiff=0.00826105;ClusterMaxEditDist=0.00826105;PBcalls=6;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2429;DistBack=19964;DistForward=-2417;DistMin=-2417;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=4:88483884-88486329;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2845.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:37:0|1:30:2:0:21:./.:0:0:0:0:0/1:36:16:0/1:210:95:2404:.:.
chr4	88775635	HG2_Ill_scalpel_4603	TGATGCTGATCTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_644:HG4_Ill_Krunchall_6934:HG3_Ill_Krunchall_6549:HG2_Ill_Krunchall_6676:HG4_10X_allpass_875:HG2_PB_pbsv_4685:HG3_PB_pbsv_4582:HG4_PB_pbsv_4718:HG2_PB_HySA_8817:HG4_Ill_MetaSV_3811:HG2_Ill_tnscope_508:HG2_Ill_MetaSV_3629:HG4_PB_assemblyticsfalcon_19305:HG4_PB_SVrefine2PBcRDovetail_2401:HG4_PB_SVrefine2Falcon1Dovetail_2871:HG4_Ill_scalpel_4519:HG4_Ill_manta_1165:HG4_Ill_GATKHCSBGrefine_3308:HG3_PB_assemblyticsfalcon_19685:HG3_PB_SVrefine2PBcRDovetail_2131:HG3_PB_SVrefine2Falcon1Dovetail_2898:HG3_PB_HySA_7228:HG3_Ill_scalpel_4684:HG3_Ill_manta_1078:HG3_Ill_MetaSV_3799:HG3_Ill_GATKHCSBGrefine_3145:HG3_10X_allpass_912:HG2_PB_assemblyticsfalcon_19746:HG2_PB_assemblyticsPBcR_19101:HG2_PB_SVrefine2PBcRplusDovetail_8218:HG2_PB_SVrefine2PB10Xhap12_3405:HG2_PB_SVrefine2Falcon2Bionano_2251:HG2_PB_SVrefine2Falcon1plusDovetail_8850:HG2_Ill_scalpel_4603:HG2_Ill_manta_1311:HG2_Ill_SpiralSDKrefine_12448:HG2_Ill_SVrefine2DISCOVARplusDovetail_9588:HG2_Ill_GATKHCSBGrefine_3157:HG2_10X_allpass_742:HG2_10X_SVrefine210Xhap12_3436;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3436:HG2_10X_allpass_742:HG2_Ill_GATKHCSBGrefine_3157:HG2_Ill_SVrefine2DISCOVARplusDovetail_9588:HG2_Ill_SpiralSDKrefine_12448:HG2_Ill_manta_1311:HG2_Ill_scalpel_4603:HG2_PB_SVrefine2Falcon1plusDovetail_8850:HG2_PB_SVrefine2Falcon2Bionano_2251:HG2_PB_SVrefine2PB10Xhap12_3405:HG2_PB_SVrefine2PBcRplusDovetail_8218:HG2_PB_assemblyticsPBcR_19101:HG2_PB_assemblyticsfalcon_19746:HG3_10X_allpass_912:HG3_Ill_GATKHCSBGrefine_3145:HG3_Ill_MetaSV_3799:HG3_Ill_manta_1078:HG3_Ill_scalpel_4684:HG3_PB_HySA_7228:HG3_PB_SVrefine2Falcon1Dovetail_2898:HG3_PB_SVrefine2PBcRDovetail_2131:HG3_PB_assemblyticsfalcon_19685:HG4_Ill_GATKHCSBGrefine_3308:HG4_Ill_manta_1165:HG4_Ill_scalpel_4519:HG4_PB_SVrefine2Falcon1Dovetail_2871:HG4_PB_SVrefine2PBcRDovetail_2401:HG4_PB_assemblyticsfalcon_19305;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0448718;ClusterMaxSizeDiff=0.0448718;ClusterMaxEditDist=0.0448718;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=13;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=6746;DistForward=530;DistMin=530;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:88775636-88775966;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2846.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:54:./.:1:4:0:1:./.:0:0:0:0:1/1:0:43:./.:1:19:.:.:.
chr4	89037668	HG3_Ill_manta_1079	AAAAAAATCACACATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCACCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_509:HG4_PB_HySA_7021:HG4_Ill_Krunchall_6937:HG3_Ill_Krunchall_6551:HG2_Ill_Krunchall_6677:HG3_PB_HySA_7231:HG4_PB_assemblyticsfalcon_19307:HG3_PB_assemblyticsfalcon_19688:HG2_PB_assemblyticsfalcon_19749:HG2_PB_assemblyticsPBcR_19104:HG2_PB_pbsv_4687:HG3_PB_pbsv_4585:HG4_PB_pbsv_4720:HG4_PB_SVrefine2PBcRDovetail_2402:HG4_PB_SVrefine2Falcon1Dovetail_2873:HG4_Ill_scalpel_4520:HG4_Ill_manta_1166:HG4_Ill_SVrefine2DISCOVARDovetail_3583:HG4_Ill_GATKHCSBGrefine_3310:HG4_10X_allpass_876:HG3_PB_SVrefine2PBcRDovetail_2133:HG3_PB_SVrefine2Falcon1Dovetail_2900:HG3_Ill_scalpel_4686:HG3_Ill_manta_1079:HG3_Ill_SVrefine2DISCOVARDovetail_3615:HG3_Ill_GATKHCSBGrefine_3147:HG3_10X_allpass_913:HG2_PB_SVrefine2PBcRplusDovetail_8220:HG2_PB_SVrefine2PB10Xhap12_3407:HG2_PB_SVrefine2Falcon2Bionano_2253:HG2_PB_SVrefine2Falcon1plusDovetail_8852:HG2_Ill_scalpel_4604:HG2_Ill_manta_1312:HG2_Ill_SVrefine2DISCOVARplusDovetail_9590:HG2_Ill_GATKHCSBGrefine_3159:HG2_10X_allpass_743:HG2_10X_SVrefine210Xhap12_3438:HG4_Ill_MetaSV_3814:HG3_Ill_MetaSV_3802:HG2_PB_HySA_8819;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3438:HG2_10X_allpass_743:HG2_Ill_GATKHCSBGrefine_3159:HG2_Ill_SVrefine2DISCOVARplusDovetail_9590:HG2_Ill_manta_1312:HG2_Ill_scalpel_4604:HG2_PB_SVrefine2Falcon1plusDovetail_8852:HG2_PB_SVrefine2Falcon2Bionano_2253:HG2_PB_SVrefine2PB10Xhap12_3407:HG2_PB_SVrefine2PBcRplusDovetail_8220:HG3_10X_allpass_913:HG3_Ill_GATKHCSBGrefine_3147:HG3_Ill_SVrefine2DISCOVARDovetail_3615:HG3_Ill_manta_1079:HG3_Ill_scalpel_4686:HG3_PB_SVrefine2Falcon1Dovetail_2900:HG3_PB_SVrefine2PBcRDovetail_2133:HG4_10X_allpass_876:HG4_Ill_GATKHCSBGrefine_3310:HG4_Ill_SVrefine2DISCOVARDovetail_3583:HG4_Ill_manta_1166:HG4_Ill_scalpel_4520:HG4_PB_SVrefine2Falcon1Dovetail_2873:HG4_PB_SVrefine2PBcRDovetail_2402;NumExactMatchSVs=24;ClusterMaxShiftDist=0.106545;ClusterMaxSizeDiff=0.106545;ClusterMaxEditDist=0.106545;PBcalls=18;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=-593;DistForward=8754;DistMin=-593;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=4:89037669-89038022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2847.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:./.:0:0:0:0:./.:0:0:0:0:1/1:0:52:0/1:2:10:.:.:.
chr4	89681460	HG2_10X_SVrefine210Xhap12_3440	TAGAAATGCCAAGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_645:HG3_PB_HySA_7235:HG4_Ill_Krunchall_6946:HG3_Ill_Krunchall_6553:HG2_Ill_Krunchall_6681:HG2_PB_assemblyticsfalcon_19755:HG2_PB_assemblyticsPBcR_19111:HG3_PB_assemblyticsfalcon_19692:HG4_PB_assemblyticsfalcon_19312:HG2_PB_pbsv_4691:HG4_PB_HySA_7026:HG2_PB_HySA_8828:HG4_Ill_MetaSV_3816:HG3_Ill_MetaSV_3803:HG2_Ill_tnscope_510:HG2_Ill_MetaSV_3632:HG4_PB_SVrefine2PBcRDovetail_2405:HG4_PB_SVrefine2Falcon1Dovetail_2876:HG4_Ill_manta_1167:HG4_Ill_GATKHCSBGrefine_3314:HG4_10X_allpass_878:HG3_PB_pbsv_4588:HG3_PB_SVrefine2PBcRDovetail_2135:HG3_PB_SVrefine2Falcon1Dovetail_2902:HG3_Ill_scalpel_4692:HG3_Ill_manta_1081:HG3_Ill_SVrefine2DISCOVARDovetail_3620:HG3_Ill_GATKHCSBGrefine_3149:HG3_10X_allpass_914:HG2_PB_SVrefine2PBcRplusDovetail_8223:HG2_PB_SVrefine2PB10Xhap12_3410:HG2_PB_SVrefine2Falcon2Bionano_2255:HG2_PB_SVrefine2Falcon1plusDovetail_8855:HG2_Ill_scalpel_4609:HG2_Ill_manta_1313:HG2_Ill_SpiralSDKrefine_12450:HG2_Ill_SVrefine2DISCOVARplusDovetail_9595:HG2_Ill_GATKHCSBGrefine_3161:HG2_10X_allpass_744:HG2_10X_SVrefine210Xhap12_3440:HG4_PB_pbsv_4726;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3440:HG2_10X_allpass_744:HG2_Ill_GATKHCSBGrefine_3161:HG2_Ill_SVrefine2DISCOVARplusDovetail_9595:HG2_Ill_SpiralSDKrefine_12450:HG2_Ill_manta_1313:HG2_Ill_scalpel_4609:HG2_PB_SVrefine2Falcon1plusDovetail_8855:HG2_PB_SVrefine2Falcon2Bionano_2255:HG2_PB_SVrefine2PB10Xhap12_3410:HG2_PB_SVrefine2PBcRplusDovetail_8223:HG3_10X_allpass_914:HG3_Ill_GATKHCSBGrefine_3149:HG3_Ill_SVrefine2DISCOVARDovetail_3620:HG3_Ill_manta_1081:HG3_Ill_scalpel_4692:HG3_PB_SVrefine2Falcon1Dovetail_2902:HG3_PB_SVrefine2PBcRDovetail_2135:HG3_PB_pbsv_4588:HG4_10X_allpass_878:HG4_Ill_GATKHCSBGrefine_3314:HG4_Ill_manta_1167:HG4_PB_SVrefine2Falcon1Dovetail_2876:HG4_PB_SVrefine2PBcRDovetail_2405;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0787402;ClusterMaxSizeDiff=0.0787402;ClusterMaxEditDist=0.0787402;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=60995;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:89681461-89681795;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2848.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:21:0:13:./.:0:0:0:0:1/1:0:43:0/1:2:7:.:.:.
chr4	91569664	HG3_10X_allpass_915	AACCACCAATGTGACTGTATTTGGAGATAAGGCCTTTAACTAAGGTTAAATGAGGTTATAAG	A	20	PASS	ClusterIDs=HG3_PB_HySA_7244:HG4_Ill_GATKHC_7922:HG4_Ill_GATKHCSBGrefine_3317:HG3_Ill_GATKHC_7858:HG3_Ill_GATKHCSBGrefine_3152:HG2_Ill_GATKHC_7851:HG2_Ill_GATKHCSBGrefine_3166:HG4_PB_HySA_7035:HG2_PB_HySA_8839:HG4_Ill_manta_1170:HG4_CG_vcfBeta_3125:HG3_Ill_manta_1083:HG3_CG_vcfBeta_2691:HG2_PB_PB10Xdip_22684:HG2_PB_PB10Xdip_22683:HG2_Ill_manta_1315:HG2_CG_vcfBeta_2768:HG2_Ill_SpiralSDKrefine_12457:HG2_Ill_breakscan11_646:HG2_Ill_Spiral_329:HG4_PB_pbsv_4732:HG3_PB_pbsv_4592:HG4_Ill_svaba_6130:HG4_Ill_Krunchall_6951:HG4_Ill_250bpfermikitraw_6609:HG4_Ill_150bpfermikitraw_6317:HG3_Ill_svaba_6125:HG3_Ill_Krunchall_6560:HG3_Ill_250bpfermikitraw_6336:HG3_Ill_150bpfermikitraw_6160:HG3_10X_allpass_915:HG2_PB_pbsv_4697:HG2_Ill_svaba_6004:HG2_Ill_scalpel_4613:HG2_Ill_Krunchall_6686:HG2_Ill_250bpfermikitraw_6555:HG2_Ill_150bpfermikitraw_6101:HG2_10X_allpass_745:HG4_PB_assemblyticsfalcon_19319:HG3_PB_assemblyticsfalcon_19701:HG2_PB_assemblyticsfalcon_19761:HG2_PB_assemblyticsPBcR_19120;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_745:HG2_Ill_150bpfermikitraw_6101:HG2_Ill_250bpfermikitraw_6555:HG2_Ill_Krunchall_6686:HG2_Ill_scalpel_4613:HG2_Ill_svaba_6004:HG2_PB_pbsv_4697:HG3_10X_allpass_915:HG3_Ill_150bpfermikitraw_6160:HG3_Ill_250bpfermikitraw_6336:HG3_Ill_Krunchall_6560:HG3_Ill_svaba_6125:HG4_Ill_150bpfermikitraw_6317:HG4_Ill_250bpfermikitraw_6609:HG4_Ill_Krunchall_6951:HG4_Ill_svaba_6130;NumExactMatchSVs=16;ClusterMaxShiftDist=0.135593;ClusterMaxSizeDiff=0.135593;ClusterMaxEditDist=0.152542;PBcalls=12;Illcalls=25;TenXcalls=2;CGcalls=3;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=4;NumTechsExact=3;SVLEN=-61;DistBack=228;DistForward=12063;DistMin=228;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:91569663-91569727;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2849.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:61:./.:0:0:2:54:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr4	91596785	HG4_Ill_SVrefine2DISCOVARDovetail_3596	TGTGTTTTTATCTTTTTTTTTTTTTTTTTTTTTTTTGGCTTGGGTTGGTGGTTTTTTTTTTTTTTTTTTTATGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTTGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCAATTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTCTTAATGATTGCCATTCTAACCGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTGCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACATTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTTGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTATTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACATCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTGACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTGTCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATTTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGAAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCTC	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_6687:HG4_10X_allpass_879:HG3_10X_allpass_916:HG2_10X_allpass_746:HG2_PB_assemblyticsPBcR_19121:HG2_PB_assemblyticsfalcon_19762:HG2_Ill_tnscope_511:HG4_PB_pbsv_4733:HG4_PB_assemblyticsfalcon_19320:HG4_PB_SVrefine2PBcRDovetail_2407:HG4_PB_SVrefine2Falcon1Dovetail_2879:HG4_Ill_SVrefine2DISCOVARDovetail_3596:HG4_Ill_GATKHCSBGrefine_3318:HG3_PB_pbsv_4593:HG3_PB_assemblyticsfalcon_19702:HG3_PB_SVrefine2PBcRDovetail_2138:HG3_PB_SVrefine2Falcon1Dovetail_2905:HG3_Ill_SVrefine2DISCOVARDovetail_3622:HG3_Ill_MetaSV_3806:HG3_Ill_GATKHCSBGrefine_3153:HG2_PB_pbsv_4698:HG2_PB_SVrefine2PBcRplusDovetail_8227:HG2_PB_SVrefine2PB10Xhap12_3415:HG2_PB_SVrefine2Falcon2Bionano_2258:HG2_PB_SVrefine2Falcon1plusDovetail_8859:HG2_Ill_SVrefine2DISCOVARplusDovetail_9601:HG2_Ill_MetaSV_3634:HG2_Ill_GATKHCSBGrefine_3167:HG2_10X_SVrefine210Xhap12_3448:HG2_Ill_SpiralSDKrefine_12458:HG4_Ill_MetaSV_3817:HG4_Ill_Krunchall_6953:HG3_Ill_Krunchall_6561:HG4_Ill_Krunchall_6952;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3448:HG2_Ill_GATKHCSBGrefine_3167:HG2_Ill_MetaSV_3634:HG2_Ill_SVrefine2DISCOVARplusDovetail_9601:HG2_PB_SVrefine2Falcon1plusDovetail_8859:HG2_PB_SVrefine2Falcon2Bionano_2258:HG2_PB_SVrefine2PB10Xhap12_3415:HG2_PB_SVrefine2PBcRplusDovetail_8227:HG2_PB_pbsv_4698:HG3_Ill_GATKHCSBGrefine_3153:HG3_Ill_MetaSV_3806:HG3_Ill_SVrefine2DISCOVARDovetail_3622:HG3_PB_SVrefine2Falcon1Dovetail_2905:HG3_PB_SVrefine2PBcRDovetail_2138:HG3_PB_assemblyticsfalcon_19702:HG3_PB_pbsv_4593:HG4_Ill_GATKHCSBGrefine_3318:HG4_Ill_SVrefine2DISCOVARDovetail_3596:HG4_PB_SVrefine2Falcon1Dovetail_2879:HG4_PB_SVrefine2PBcRDovetail_2407:HG4_PB_assemblyticsfalcon_19320:HG4_PB_pbsv_4733;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00653008;ClusterMaxSizeDiff=0.00653008;ClusterMaxEditDist=0.00653008;PBcalls=15;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=13;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-6123;DistBack=14969;DistForward=56828;DistMin=14969;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:91596786-91602921;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2850.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:136:./.:0:0:0:1:./.:0:0:0:0:1/1:0:22:1/1:1:401:6184:.:.
chr4	92159979	HG4_PB_SVrefine2PBcRDovetail_2410	ATTTTTTTTTTTTTGAGACGGAGTCTCGCATGGTCACCCAGGCTAGAGTGCAGTGGCAGGACCTCAGCTCACCGCAACCTCTGCCTCCAGAGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCACCACCGTGCCTGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGTTTTCACCACTTTAGCCAGGATGGTCTCGATCTTCTGACCACGTGATCCCCCCCACCTCAGCCTCCCAAAGTGCTGGTATTACAAGCGTGAGCCACTGCGCCCGGCCTATTTTAAGCATTTGTAATGCATTAATTCATCTAATCATCACAACCATTATAATCAACTTCATCTTATGGATGGGATAACTCAAGTATAAGGAAGTTAAATAATTTCCCCTAGATCACACAGCTAGTAAGCAACAAAACTAGGGTTCGAATATCTAGGCAGTCTCATTTTAGAATGTGCGAATTTAACTACATACTGCCTCTTCTGACAGACCGTTGACGACTATTACCTGTGAAGGTCCCAGCCACATTTGCACATGTCATATTGTGAAGTCATAGCTTCCTTAGTTTTCTGATAAGTTGCAGAGGTTGCAATGTGGGAGATTTTCTTGCTACTTAAGAAATACTTTGTAAATCTCACAATGATTAAGAAGTCTGAGAAGCTCTGACAGCTCTCAGCAAAATTTTAGAAATCCAGGTGAAAAATCAGTGTTTTTGAAAATGTATGTTTATATTACAGATGACTATAAAAAATTGCAAATCCTTAAATTATGAATGACCAATATCTAAAATTTCACATCAACAAGAAGAAATATATTAAACATTCAGATGGATTGGCTTTTTACAAGATTTTCAATATTTGGAATTTTTGTCATAAGTAAAATCTAATGTTAATACGTATGTGATTCATGGTAGTTCCTATTTTAGAACTTTCTAACCTGTCATTATGAGATATTTTTATCTGTCTTGCTCCCATGCTTTTCTGTGCATGTCACTGACTAAAATAATTTACATAAGAAAAAATTCAATTTGTAAAGAAAGGACACATTCAGAGAATAATTTTTATTAATATTATCTTCATGATAACATATCAATTTGTTTATAAATAAAGCCGTGTGGCCTCATTACTGACTTAGAGAATACTTGGCAGGTACTCATTTTTGTCTCTCTTGGCTAATGGTTAATGCAGTGCACCTGTTTTAGAACACTGAAATCTCTACTCATAAAATACATTTTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3452:HG4_PB_HySA_7038:HG4_Ill_MetaSV_3819:HG4_Ill_GATKHCSBGrefine_3321:HG2_Ill_SpiralSDKrefine_12461:HG2_Ill_GATKHCSBGrefine_3170:HG4_PB_pbsv_4740:HG4_Ill_GATKHCSBGrefine_3320:HG2_Ill_GATKHCSBGrefine_3169:HG3_PB_pbsv_4596:HG2_PB_pbsv_4703:HG2_PB_HySA_8843:HG2_PB_SVrefine2Falcon2Bionano_2260:HG2_PB_SVrefine2Falcon1plusDovetail_8861:HG4_PB_SVrefine2PBcRDovetail_2410:HG4_PB_SVrefine2Falcon1Dovetail_2882:HG4_Ill_SVrefine2DISCOVARDovetail_3599:HG3_PB_SVrefine2Falcon1Dovetail_2908:HG2_PB_SVrefine2PBcRplusDovetail_8229:HG2_PB_SVrefine2PB10Xhap12_3417:HG2_Ill_SVrefine2DISCOVARplusDovetail_9603;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3452:HG4_PB_SVrefine2PBcRDovetail_2410:HG4_PB_SVrefine2Falcon1Dovetail_2882:HG4_Ill_SVrefine2DISCOVARDovetail_3599:HG3_PB_SVrefine2Falcon1Dovetail_2908:HG2_PB_SVrefine2PBcRplusDovetail_8229:HG2_PB_SVrefine2PB10Xhap12_3417:HG2_Ill_SVrefine2DISCOVARplusDovetail_9603;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00479616;ClusterMaxSizeDiff=0.00479616;ClusterMaxEditDist=0.0375249;PBcalls=12;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1252;DistBack=13523;DistForward=-932;DistMin=-932;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1522;REFWIDENED=4:92159980-92162753;PctSeqSimilarity=0.9635;PctSizeSimilarity=0.9992;PctRecOverlap=0.5962;SizeDiff=1;StartDistance=-506;EndDistance=-505;GTMatch=0;TruScore=85;MatchId=2851.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:13:54:1/1:4:40:2:7:./.:0:0:0:0:0/0:46:0:0/1:30:53:1482:.:.
chr4	92920204	HG4_Ill_250bpfermikitraw_6616	TATTATATATATAATATATATATTATATATATAATATATATATTATATATATAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_8847:HG4_Ill_svaba_6137:HG4_Ill_250bpfermikitraw_6616:HG4_Ill_150bpfermikitraw_6324:HG3_Ill_svaba_6135:HG2_Ill_svaba_6014:HG2_Ill_manta_1316:HG2_Ill_250bpfermikitraw_6567:HG2_Ill_150bpfermikitraw_6112;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6112:HG2_Ill_250bpfermikitraw_6567:HG2_Ill_manta_1316:HG2_Ill_svaba_6014:HG3_Ill_svaba_6135:HG4_Ill_150bpfermikitraw_6324:HG4_Ill_250bpfermikitraw_6616:HG4_Ill_svaba_6137;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.0183486;PBcalls=1;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-53;DistBack=26;DistForward=-34;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:92920203-92920258;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2852.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:36:./.:4:8:1:1:./.:0:0:0:0:./.:3:19:./.:.:.:.:.:.
chr4	93499192	HG2_10X_allpass_748	TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	T	20	PASS	ClusterIDs=HG2_PB_HySA_8851:HG3_PB_HySA_7255:HG2_PB_assemblyticsfalcon_19776:HG2_PB_assemblyticsPBcR_19133:HG2_PB_pbsv_4707:HG3_PB_pbsv_4604:HG3_Ill_Krunchall_6575:HG3_Ill_GATKHCSBGrefine_3158:HG2_Ill_Krunchall_6699:HG2_Ill_GATKHC_7870:HG2_Ill_GATKHCSBGrefine_3174:HG2_Ill_250bpfermikitraw_6571:HG2_10X_allpass_748;NumClusterSVs=13;ExactMatchIDs=HG2_10X_allpass_748:HG2_Ill_250bpfermikitraw_6571:HG2_Ill_GATKHCSBGrefine_3174:HG2_Ill_GATKHC_7870:HG2_Ill_Krunchall_6699:HG3_Ill_GATKHCSBGrefine_3158:HG3_Ill_Krunchall_6575;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0776699;ClusterMaxSizeDiff=0.0582524;ClusterMaxEditDist=0.0970874;PBcalls=6;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-51;DistBack=20392;DistForward=1753;DistMin=1753;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=29;REFWIDENED=4:93499193-93499272;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2853.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:44:0|1:15:2:4:42:./.:0:0:0:0:0/1:11:15:./.:.:.:.:.:.
chr4	94439081	HG2_Ill_250bpfermikitraw_6581	TATGTATGTATATACATACATGTATATGTATGTATATACATACATGTACATGTATGTATATACATACATGTATATGTATGTATATACATACATGTAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3461:HG2_PB_PB10Xdip_22751:HG2_PB_SVrefine2PB10Xhap12_3423:HG3_PB_HySA_7266:HG3_PB_pbsv_4609:HG3_Ill_svaba_6147:HG3_Ill_scalpel_4717:HG3_Ill_manta_1086:HG3_Ill_Krunchall_6587:HG3_Ill_GATKHC_7888:HG3_Ill_GATKHCSBGrefine_3160:HG3_Ill_250bpfermikitraw_6360:HG3_Ill_150bpfermikitraw_6182:HG3_10X_allpass_920:HG2_Ill_svaba_6024:HG2_Ill_manta_1318:HG2_Ill_SpiralSDKrefine_12477:HG2_Ill_Krunchall_6711:HG2_Ill_GATKHC_7882:HG2_Ill_GATKHCSBGrefine_3177:HG2_Ill_250bpfermikitraw_6581:HG2_Ill_150bpfermikitraw_6122:HG2_10X_allpass_751:HG2_PB_pbsv_4714:HG2_PB_SVrefine2PBcRplusDovetail_8233:HG3_Ill_SVrefine2DISCOVARDovetail_3634;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_751:HG2_Ill_150bpfermikitraw_6122:HG2_Ill_250bpfermikitraw_6581:HG2_Ill_GATKHCSBGrefine_3177:HG2_Ill_GATKHC_7882:HG2_Ill_Krunchall_6711:HG2_Ill_SpiralSDKrefine_12477:HG2_Ill_manta_1318:HG2_Ill_svaba_6024:HG3_10X_allpass_920:HG3_Ill_150bpfermikitraw_6182:HG3_Ill_250bpfermikitraw_6360:HG3_Ill_GATKHCSBGrefine_3160:HG3_Ill_GATKHC_7888:HG3_Ill_Krunchall_6587:HG3_Ill_manta_1086:HG3_Ill_scalpel_4717:HG3_Ill_svaba_6147;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0732984;ClusterMaxSizeDiff=0.0631579;ClusterMaxEditDist=0.136126;PBcalls=6;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-96;DistBack=46215;DistForward=-24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=124;REFWIDENED=4:94439040-94439259;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2854.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:46:0|1:31:2:1:39:./.:0:0:0:0:0/1:33:23:./.:.:.:.:.:.
chr4	94559439	HG4_PB_SVrefine2PBcRDovetail_2411	TTAAAACTTGCATCTTTTTTTTTTTTTTTTTTAATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCACCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATATCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGTTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGCGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGTCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGCATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAAGTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCACTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTTGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGATGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTCCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTCGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAGCTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCACCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCTTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCAGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTAGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCCGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCAC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_514:HG3_10X_allpass_921:HG2_10X_allpass_752:HG3_PB_pbsv_4610:HG3_Ill_MetaSV_3811:HG2_Ill_MetaSV_3639:HG4_PB_assemblyticsfalcon_19354:HG2_PB_assemblyticsfalcon_19793:HG4_10X_allpass_883:HG4_Ill_Krunchall_6977:HG3_Ill_Krunchall_6591:HG2_Ill_Krunchall_6713:HG4_PB_pbsv_4750:HG4_PB_SVrefine2PBcRDovetail_2411:HG4_PB_SVrefine2Falcon1Dovetail_2887:HG4_Ill_SVrefine2DISCOVARDovetail_3611:HG4_Ill_MetaSV_3822:HG4_Ill_GATKHCSBGrefine_3328:HG3_PB_SVrefine2PBcRDovetail_2145:HG3_PB_SVrefine2Falcon1Dovetail_2915:HG3_Ill_SVrefine2DISCOVARDovetail_3636:HG2_PB_pbsv_4715:HG2_PB_SVrefine2PBcRplusDovetail_8234:HG2_PB_SVrefine2PB10Xhap12_3424:HG2_PB_SVrefine2Falcon2Bionano_2264:HG2_PB_SVrefine2Falcon1plusDovetail_8867:HG2_Ill_SpiralSDKrefine_12479:HG2_Ill_GATKHCSBGrefine_3178:HG2_10X_SVrefine210Xhap12_3462;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3462:HG2_Ill_GATKHCSBGrefine_3178:HG2_Ill_SpiralSDKrefine_12479:HG2_PB_SVrefine2Falcon1plusDovetail_8867:HG2_PB_SVrefine2Falcon2Bionano_2264:HG2_PB_SVrefine2PB10Xhap12_3424:HG2_PB_SVrefine2PBcRplusDovetail_8234:HG2_PB_pbsv_4715:HG3_Ill_SVrefine2DISCOVARDovetail_3636:HG3_PB_SVrefine2Falcon1Dovetail_2915:HG3_PB_SVrefine2PBcRDovetail_2145:HG4_Ill_GATKHCSBGrefine_3328:HG4_Ill_MetaSV_3822:HG4_Ill_SVrefine2DISCOVARDovetail_3611:HG4_PB_SVrefine2Falcon1Dovetail_2887:HG4_PB_SVrefine2PBcRDovetail_2411:HG4_PB_pbsv_4750;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00578704;ClusterMaxSizeDiff=0.00578704;ClusterMaxEditDist=0.00578704;PBcalls=13;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-6051;DistBack=21681;DistForward=-6042;DistMin=-6042;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:94559440-94565505;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2855.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:46:0|1:38:0:3:22:./.:0:0:0:0:0/1:41:12:0/1:369:214:6075:.:.
chr4	95498964	HG2_Ill_svaba_6034	AAACTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3640:HG3_PB_HySA_7275:HG4_PB_assemblyticsfalcon_19359:HG3_PB_assemblyticsfalcon_19734:HG2_PB_assemblyticsfalcon_19799:HG2_PB_HySA_8867:HG4_Ill_Krunchall_6985:HG3_Ill_Krunchall_6602:HG2_Ill_Krunchall_6720:HG2_PB_assemblyticsPBcR_19153:HG4_Ill_Spiral_388:HG3_Ill_Spiral_5158:HG2_Ill_Spiral_330:HG2_PB_pbsv_4717:HG4_PB_pbsv_4751:HG3_PB_pbsv_4611:HG4_PB_SVrefine2PBcRDovetail_2412:HG4_PB_SVrefine2Falcon1Dovetail_2888:HG4_PB_HySA_7063:HG4_Ill_svaba_6156:HG4_Ill_SVrefine2DISCOVARDovetail_3613:HG4_Ill_GATKHCSBGrefine_3329:HG4_10X_allpass_884:HG3_PB_SVrefine2PBcRDovetail_2146:HG3_PB_SVrefine2Falcon1Dovetail_2916:HG3_Ill_svaba_6158:HG3_Ill_scalpel_4730:HG3_Ill_manta_1087:HG3_Ill_SVrefine2DISCOVARDovetail_3638:HG3_Ill_GATKHCSBGrefine_3162:HG3_10X_allpass_923:HG2_PB_SVrefine2PBcRplusDovetail_8235:HG2_PB_SVrefine2PB10Xhap12_3425:HG2_PB_SVrefine2Falcon2Bionano_2265:HG2_PB_SVrefine2Falcon1plusDovetail_8868:HG2_Ill_svaba_6034:HG2_Ill_scalpel_4639:HG2_Ill_manta_1319:HG2_Ill_GATKHCSBGrefine_3180:HG2_10X_allpass_753:HG2_10X_SVrefine210Xhap12_3463:HG2_Ill_breakscan11_648:HG4_Ill_MetaSV_3823:HG3_Ill_MetaSV_3812:HG2_Ill_tnscope_515;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3463:HG2_10X_allpass_753:HG2_Ill_GATKHCSBGrefine_3180:HG2_Ill_manta_1319:HG2_Ill_scalpel_4639:HG2_Ill_svaba_6034:HG2_PB_SVrefine2Falcon1plusDovetail_8868:HG2_PB_SVrefine2Falcon2Bionano_2265:HG2_PB_SVrefine2PB10Xhap12_3425:HG2_PB_SVrefine2PBcRplusDovetail_8235:HG3_10X_allpass_923:HG3_Ill_GATKHCSBGrefine_3162:HG3_Ill_SVrefine2DISCOVARDovetail_3638:HG3_Ill_manta_1087:HG3_Ill_scalpel_4730:HG3_Ill_svaba_6158:HG3_PB_SVrefine2Falcon1Dovetail_2916:HG3_PB_SVrefine2PBcRDovetail_2146:HG4_10X_allpass_884:HG4_Ill_GATKHCSBGrefine_3329:HG4_Ill_SVrefine2DISCOVARDovetail_3613:HG4_Ill_svaba_6156:HG4_PB_HySA_7063:HG4_PB_SVrefine2Falcon1Dovetail_2888:HG4_PB_SVrefine2PBcRDovetail_2412;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0853081;ClusterMaxSizeDiff=0.0853081;ClusterMaxEditDist=0.0853081;PBcalls=18;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=83380;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=4:95498965-95499290;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2856.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:84:1/1:2:20:0:16:./.:0:0:0:0:1/1:1:36:./.:1:14:.:.:.
chr4	95870448	HG2_PB_SVrefine2PB10Xhap12_3426	ATGAACTCATTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTGATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3465:HG2_PB_PB10Xdip_22754:HG3_Ill_Krunchall_6603:HG3_PB_pbsv_4612:HG2_PB_pbsv_4718:HG3_PB_HySA_7276:HG3_Ill_MetaSV_3813:HG2_Ill_tnscope_516:HG4_PB_SVrefine2Falcon1Dovetail_2889:HG3_PB_SVrefine2PBcRDovetail_2147:HG3_PB_SVrefine2Falcon1Dovetail_2917:HG3_Ill_scalpel_4731:HG3_Ill_manta_1088:HG3_Ill_SVrefine2DISCOVARDovetail_3640:HG3_Ill_GATKHCSBGrefine_3163:HG3_10X_allpass_924:HG2_PB_SVrefine2PB10Xhap12_3426:HG2_PB_SVrefine2Falcon2Bionano_2266:HG2_PB_SVrefine2Falcon1plusDovetail_8869:HG2_PB_HySA_8869:HG2_Ill_scalpel_4642:HG2_Ill_manta_1320:HG2_Ill_SVrefine2DISCOVARplusDovetail_9614:HG2_Ill_MetaSV_3641:HG2_Ill_GATKHCSBGrefine_3181:HG2_10X_allpass_754;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3465:HG4_PB_SVrefine2Falcon1Dovetail_2889:HG3_PB_SVrefine2PBcRDovetail_2147:HG3_PB_SVrefine2Falcon1Dovetail_2917:HG3_Ill_scalpel_4731:HG3_Ill_manta_1088:HG3_Ill_SVrefine2DISCOVARDovetail_3640:HG3_Ill_GATKHCSBGrefine_3163:HG3_10X_allpass_924:HG2_PB_SVrefine2PB10Xhap12_3426:HG2_PB_SVrefine2Falcon2Bionano_2266:HG2_PB_SVrefine2Falcon1plusDovetail_8869:HG2_PB_HySA_8869:HG2_Ill_scalpel_4642:HG2_Ill_manta_1320:HG2_Ill_SVrefine2DISCOVARplusDovetail_9614:HG2_Ill_MetaSV_3641:HG2_Ill_GATKHCSBGrefine_3181:HG2_10X_allpass_754;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0880503;ClusterMaxSizeDiff=0.0880503;ClusterMaxEditDist=0.0880503;PBcalls=11;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=41235;DistForward=-301;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=4:95870449-95870783;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2857.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:23:0|1:24:2:1:19:./.:0:0:0:0:0/1:36:21:0/1:22:7:.:.:.
chr4	96382454	HG2_Ill_SVrefine2DISCOVARplusDovetail_9617	TGAAGCACAAGGCAAGAGCAAGTTGAATAGATGACAAAGGAGAGAAATCAAAAAAAGAAGATGTTATGCTCTGTTACTAAAATACTGTATTGTGAACATATTGTAATCAAATATAATTAGAAAAATATTCCCAAAGTAAAATTATAAATTATTGTTGGCTTGTCTAAAATACAATTACAATCCAAACAAGAGAATCAAGTATTTACA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_4614:HG2_PB_HySA_8874:HG2_Ill_MetaSV_3642:HG4_PB_pbsv_4753:HG4_PB_assemblyticsfalcon_19364:HG4_PB_SVrefine2PBcRDovetail_2414:HG4_PB_SVrefine2Falcon1Dovetail_2891:HG4_Ill_svaba_6163:HG4_Ill_scalpel_4553:HG4_Ill_manta_1173:HG4_Ill_MetaSV_3824:HG4_Ill_GATKHCSBGrefine_3330:HG4_Ill_Cortex_2691:HG4_10X_allpass_885:HG3_PB_SVrefine2PBcRDovetail_2149:HG3_PB_SVrefine2Falcon1Dovetail_2919:HG3_Ill_svaba_6165:HG3_Ill_manta_1089:HG3_Ill_SVrefine2DISCOVARDovetail_3642:HG3_Ill_MetaSV_3814:HG3_Ill_GATKHCSBGrefine_3164:HG3_Ill_Cortex_2707:HG3_10X_allpass_925:HG2_PB_assemblyticsfalcon_19805:HG2_PB_SVrefine2PBcRplusDovetail_8238:HG2_PB_SVrefine2PB10Xhap12_3428:HG2_PB_SVrefine2Falcon2Bionano_2267:HG2_PB_SVrefine2Falcon1plusDovetail_8871:HG2_Ill_svaba_6039:HG2_Ill_scalpel_4645:HG2_Ill_manta_1321:HG2_Ill_breakscan11_649:HG2_Ill_SpiralSDKrefine_12491:HG2_Ill_SVrefine2DISCOVARplusDovetail_9617:HG2_Ill_GATKHCSBGrefine_3182:HG2_Ill_Cortex_6400:HG2_10X_allpass_755:HG2_10X_SVrefine210Xhap12_3466:HG3_PB_assemblyticsfalcon_19739:HG4_Ill_Krunchall_6996:HG3_Ill_Krunchall_6610:HG2_Ill_Krunchall_6730:HG2_PB_assemblyticsPBcR_19159:HG2_PB_pbsv_4720:HG4_Ill_Krunchall_6995:HG3_Ill_Krunchall_6609:HG2_Ill_Krunchall_6729;NumClusterSVs=47;ExactMatchIDs=HG2_PB_assemblyticsPBcR_19159:HG2_10X_SVrefine210Xhap12_3466:HG2_10X_allpass_755:HG2_Ill_Cortex_6400:HG2_Ill_GATKHCSBGrefine_3182:HG2_Ill_SVrefine2DISCOVARplusDovetail_9617:HG2_Ill_SpiralSDKrefine_12491:HG2_Ill_breakscan11_649:HG2_Ill_manta_1321:HG2_Ill_scalpel_4645:HG2_Ill_svaba_6039:HG2_PB_SVrefine2Falcon1plusDovetail_8871:HG2_PB_SVrefine2Falcon2Bionano_2267:HG2_PB_SVrefine2PB10Xhap12_3428:HG2_PB_SVrefine2PBcRplusDovetail_8238:HG2_PB_assemblyticsfalcon_19805:HG3_10X_allpass_925:HG3_Ill_Cortex_2707:HG3_Ill_GATKHCSBGrefine_3164:HG3_Ill_MetaSV_3814:HG3_Ill_SVrefine2DISCOVARDovetail_3642:HG3_Ill_manta_1089:HG3_Ill_svaba_6165:HG3_PB_SVrefine2Falcon1Dovetail_2919:HG3_PB_SVrefine2PBcRDovetail_2149:HG4_10X_allpass_885:HG4_Ill_Cortex_2691:HG4_Ill_GATKHCSBGrefine_3330:HG4_Ill_MetaSV_3824:HG4_Ill_manta_1173:HG4_Ill_scalpel_4553:HG4_Ill_svaba_6163:HG4_PB_SVrefine2Falcon1Dovetail_2891:HG4_PB_SVrefine2PBcRDovetail_2414:HG4_PB_assemblyticsfalcon_19364:HG4_PB_pbsv_4753;NumExactMatchSVs=36;ClusterMaxShiftDist=0.00966184;ClusterMaxSizeDiff=0.00966184;ClusterMaxEditDist=0.0144928;PBcalls=16;Illcalls=27;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=20;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-206;DistBack=0;DistForward=24879;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:96382455-96382660;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2858.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:34:0|1:13:4:4:25:./.:0:0:0:0:0/1:45:25:./.:.:.:.:.:.
chr4	97214268	HG2_PB_SVrefine2PBcRplusDovetail_8241	GATAAACTAATTTTATTTTAAAATAAAATAATAAACTAATTTTATTTTAAAATAAAATAATAAACTAATTTTATTTTAAAATAAAATAATAAACTAATTTTATTTTAAAATAAAATAATAAACTAATTTTATTTTAAAATAAAATAATAAACTAATTTTATTTTAAAATAAAATAATAAACTAATTTTATTTTAAAATAAAATAATAAACTAATTTTATTTTAAAATAAAATAATAAACTAATTTTATTTTAAAATAAAATA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_4755:HG3_PB_SVrefine2Falcon1Dovetail_2921:HG3_PB_assemblyticsfalcon_19744:HG4_Ill_GATKHCSBGrefine_3331:HG3_Ill_MetaSV_3816:HG2_Ill_MetaSV_3643:HG2_10X_SVrefine210Xhap12_3469:HG2_PB_HySA_8880:HG3_PB_pbsv_4616:HG2_PB_pbsv_4722:HG4_PB_SVrefine2PBcRDovetail_2416:HG4_PB_SVrefine2Falcon1Dovetail_2893:HG3_PB_SVrefine2PBcRDovetail_2152:HG3_Ill_SVrefine2DISCOVARDovetail_3646:HG2_PB_SVrefine2PBcRplusDovetail_8241:HG2_PB_SVrefine2PB10Xhap12_3431:HG2_PB_SVrefine2Falcon2Bionano_2269:HG2_PB_SVrefine2Falcon1plusDovetail_8873:HG2_Ill_SVrefine2DISCOVARplusDovetail_9619;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9619:HG2_PB_SVrefine2Falcon1plusDovetail_8873:HG2_PB_SVrefine2Falcon2Bionano_2269:HG2_PB_SVrefine2PB10Xhap12_3431:HG2_PB_SVrefine2PBcRplusDovetail_8241:HG3_Ill_SVrefine2DISCOVARDovetail_3646:HG3_PB_SVrefine2PBcRDovetail_2152:HG4_PB_SVrefine2Falcon1Dovetail_2893:HG4_PB_SVrefine2PBcRDovetail_2416;NumExactMatchSVs=9;ClusterMaxShiftDist=0.291326;ClusterMaxSizeDiff=0.291326;ClusterMaxEditDist=0.291326;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-261;DistBack=-333;DistForward=-116;DistMin=-333;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=147;REFWIDENED=4:97214298-97214676;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2859.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:77:./.:0:0:0:1:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr4	97295651	HG4_Ill_250bpfermikitraw_6653	TCATATAATACTTATTTTAAGCCATTAAGTGTATAAGAATTTGTTATAGCCACAATAGAAAACTAATACAGGAATATATAATA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9620:HG3_PB_pbsv_4617:HG2_PB_pbsv_4723:HG4_PB_pbsv_4756:HG4_Ill_GATKHCSBGrefine_3332:HG4_Ill_250bpfermikitraw_6653:HG3_PB_assemblyticsfalcon_19745:HG3_Ill_GATKHCSBGrefine_3167:HG3_Ill_250bpfermikitraw_6383:HG3_Ill_150bpfermikitraw_6213:HG2_Ill_GATKHCSBGrefine_3185:HG2_Ill_250bpfermikitraw_6605:HG2_Ill_150bpfermikitraw_6146:HG4_Ill_SVrefine2DISCOVARDovetail_3620:HG3_PB_SVrefine2PBcRDovetail_2153:HG3_Ill_SVrefine2DISCOVARDovetail_3647:HG2_PB_SVrefine2PBcRplusDovetail_8242:HG2_PB_SVrefine2PB10Xhap12_3432:HG2_PB_SVrefine2Falcon2Bionano_2270:HG2_PB_SVrefine2Falcon1plusDovetail_8874;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6146:HG2_Ill_250bpfermikitraw_6605:HG2_Ill_GATKHCSBGrefine_3185:HG3_Ill_150bpfermikitraw_6213:HG3_Ill_250bpfermikitraw_6383:HG3_Ill_GATKHCSBGrefine_3167:HG3_PB_assemblyticsfalcon_19745:HG4_Ill_250bpfermikitraw_6653:HG4_Ill_GATKHCSBGrefine_3332;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0246914;ClusterMaxSizeDiff=0.0243902;ClusterMaxEditDist=0.121951;PBcalls=9;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-82;DistBack=-157;DistForward=-13;DistMin=-157;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=323;REFWIDENED=4:97295498-97295902;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2860.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:72:./.:0:0:0:0:./.:0:0:0:0:1/1:0:15:./.:.:.:.:.:.
chr4	97572102	HG2_Ill_SVrefine2DISCOVARplusDovetail_9622	AAAACAAAATTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_650:HG3_PB_pbsv_4619:HG2_PB_HySA_8883:HG3_PB_assemblyticsfalcon_19747:HG4_PB_assemblyticsfalcon_19372:HG2_PB_assemblyticsfalcon_19812:HG2_PB_assemblyticsPBcR_19169:HG4_Ill_Krunchall_7005:HG2_Ill_Krunchall_6738:HG3_PB_HySA_7288:HG2_PB_pbsv_4725:HG4_PB_pbsv_4758:HG4_PB_SVrefine2PBcRDovetail_2418:HG4_PB_SVrefine2Falcon1Dovetail_2895:HG4_Ill_scalpel_4559:HG4_Ill_manta_1174:HG4_Ill_SVrefine2DISCOVARDovetail_3622:HG4_Ill_GATKHCSBGrefine_3333:HG4_10X_allpass_886:HG3_PB_SVrefine2PBcRDovetail_2155:HG3_PB_SVrefine2Falcon1Dovetail_2923:HG3_Ill_scalpel_4742:HG3_Ill_manta_1091:HG3_Ill_SVrefine2DISCOVARDovetail_3649:HG3_Ill_GATKHCSBGrefine_3168:HG3_10X_allpass_927:HG2_PB_SVrefine2PBcRplusDovetail_8244:HG2_PB_SVrefine2PB10Xhap12_3434:HG2_PB_SVrefine2Falcon2Bionano_2272:HG2_PB_SVrefine2Falcon1plusDovetail_8876:HG2_Ill_scalpel_4652:HG2_Ill_manta_1322:HG2_Ill_SVrefine2DISCOVARplusDovetail_9622:HG2_Ill_MetaSV_3644:HG2_Ill_GATKHCSBGrefine_3186:HG2_10X_allpass_756:HG2_10X_SVrefine210Xhap12_3472:HG4_Ill_MetaSV_3825:HG3_Ill_Spiral_5169:HG3_Ill_MetaSV_3817:HG2_Ill_tnscope_517:HG2_Ill_Spiral_331;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3472:HG2_10X_allpass_756:HG2_Ill_GATKHCSBGrefine_3186:HG2_Ill_MetaSV_3644:HG2_Ill_SVrefine2DISCOVARplusDovetail_9622:HG2_Ill_manta_1322:HG2_Ill_scalpel_4652:HG2_PB_SVrefine2Falcon1plusDovetail_8876:HG2_PB_SVrefine2Falcon2Bionano_2272:HG2_PB_SVrefine2PB10Xhap12_3434:HG2_PB_SVrefine2PBcRplusDovetail_8244:HG3_10X_allpass_927:HG3_Ill_GATKHCSBGrefine_3168:HG3_Ill_SVrefine2DISCOVARDovetail_3649:HG3_Ill_manta_1091:HG3_Ill_scalpel_4742:HG3_PB_SVrefine2Falcon1Dovetail_2923:HG3_PB_SVrefine2PBcRDovetail_2155:HG4_10X_allpass_886:HG4_Ill_GATKHCSBGrefine_3333:HG4_Ill_SVrefine2DISCOVARDovetail_3622:HG4_Ill_manta_1174:HG4_Ill_scalpel_4559:HG4_PB_SVrefine2Falcon1Dovetail_2895:HG4_PB_SVrefine2PBcRDovetail_2418:HG4_PB_pbsv_4758;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0730159;ClusterMaxSizeDiff=0.0730159;ClusterMaxEditDist=0.0730159;PBcalls=17;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=2489;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=4:97572103-97572433;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2861.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:77:1/1:2:32:0:9:./.:0:0:0:0:1/1:0:37:0/1:1:8:.:.:.
chr4	97897194	HG4_Ill_manta_1175	GCAAGTCTCTCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8246:HG2_PB_assemblyticsPBcR_19174:HG2_PB_HySA_8885:HG3_PB_assemblyticsfalcon_19751:HG4_Ill_Krunchall_7007:HG2_Ill_breakscan11_651:HG4_PB_pbsv_4760:HG2_PB_pbsv_4727:HG3_PB_SVrefine2Falcon1Dovetail_2925:HG2_Ill_tnscope_518:HG4_Ill_scalpel_4561:HG4_Ill_manta_1175:HG4_Ill_MetaSV_3826:HG4_10X_allpass_887:HG2_PB_SVrefine2PB10Xhap12_3436:HG2_PB_SVrefine2Falcon1plusDovetail_8878:HG2_PB_HySA_8884:HG2_Ill_manta_1323:HG2_Ill_MetaSV_3645:HG2_Ill_GATKHCSBGrefine_3187:HG2_10X_allpass_757:HG2_10X_SVrefine210Xhap12_3474;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3474:HG2_10X_allpass_757:HG2_Ill_GATKHCSBGrefine_3187:HG2_Ill_MetaSV_3645:HG2_Ill_manta_1323:HG2_PB_HySA_8884:HG2_PB_SVrefine2Falcon1plusDovetail_8878:HG2_PB_SVrefine2PB10Xhap12_3436:HG4_10X_allpass_887:HG4_Ill_MetaSV_3826:HG4_Ill_manta_1175:HG4_Ill_scalpel_4561;NumExactMatchSVs=12;ClusterMaxShiftDist=0.106545;ClusterMaxSizeDiff=0.106545;ClusterMaxEditDist=0.106545;PBcalls=10;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=8488;DistForward=-331;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:97887776-97899938;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2862.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:38:0|1:40:0:1:36:./.:0:0:0:0:0/1:19:21:0/1:22:7:.:.:.
chr4	98110644	HG3_Ill_scalpel_4744	ATTTGCTGTAGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3475:HG3_10X_allpass_928:HG3_PB_HySA_7289:HG4_10X_allpass_888:HG4_Ill_Krunchall_7010:HG4_PB_assemblyticsfalcon_19375:HG2_PB_assemblyticsfalcon_19819:HG4_PB_pbsv_4761:HG2_PB_pbsv_4728:HG4_Ill_MetaSV_3827:HG3_Ill_MetaSV_3819:HG2_Ill_tnscope_519:HG4_Ill_manta_1176:HG4_Ill_GATKHCSBGrefine_3334:HG3_PB_pbsv_4621:HG3_Ill_scalpel_4744:HG3_Ill_GATKHCSBGrefine_3169:HG2_Ill_scalpel_4657:HG2_Ill_manta_1324:HG2_Ill_breakscan11_652:HG2_Ill_MetaSV_3646:HG2_Ill_GATKHCSBGrefine_3188:HG2_10X_allpass_758:HG4_Ill_Spiral_390:HG3_Ill_Spiral_5171:HG2_Ill_Spiral_332:HG4_PB_SVrefine2PBcRDovetail_2420:HG4_PB_SVrefine2Falcon1Dovetail_2897:HG2_PB_SVrefine2PB10Xhap12_3438:HG2_PB_SVrefine2Falcon2Bionano_2274:HG2_PB_SVrefine2Falcon1plusDovetail_8879;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_758:HG2_Ill_GATKHCSBGrefine_3188:HG2_Ill_MetaSV_3646:HG2_Ill_breakscan11_652:HG2_Ill_manta_1324:HG2_Ill_scalpel_4657:HG3_Ill_GATKHCSBGrefine_3169:HG3_Ill_scalpel_4744:HG3_PB_pbsv_4621:HG4_Ill_GATKHCSBGrefine_3334:HG4_Ill_manta_1176;NumExactMatchSVs=11;ClusterMaxShiftDist=0.135385;ClusterMaxSizeDiff=0.135385;ClusterMaxEditDist=0.135385;PBcalls=11;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-355;DistForward=-313;DistMin=-355;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=4:98110641-98110983;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2863.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:29:0|1:29:2:1:26:./.:0:0:0:0:0/1:26:20:0/1:33:8:.:.:.
chr4	98133375	HG2_PB_pbsv_4729	TAGGAACTTAATTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3476:HG2_PB_assemblyticsPBcR_19177:HG4_Ill_Krunchall_7011:HG3_Ill_Krunchall_6619:HG2_Ill_Krunchall_6743:HG3_PB_HySA_7290:HG4_PB_pbsv_4762:HG2_Ill_breakscan11_653:HG3_Ill_MetaSV_3820:HG2_Ill_tnscope_520:HG2_Ill_MetaSV_3647:HG4_PB_SVrefine2Falcon1Dovetail_2898:HG4_PB_HySA_7082:HG4_Ill_manta_1177:HG4_Ill_MetaSV_3828:HG4_Ill_GATKHCSBGrefine_3335:HG4_10X_allpass_889:HG3_PB_pbsv_4622:HG3_PB_SVrefine2Falcon1Dovetail_2926:HG3_Ill_manta_1092:HG3_Ill_SVrefine2DISCOVARDovetail_3651:HG3_Ill_GATKHCSBGrefine_3170:HG3_10X_allpass_929:HG2_PB_pbsv_4729:HG2_PB_SVrefine2PBcRplusDovetail_8248:HG2_PB_SVrefine2PB10Xhap12_3439:HG2_PB_SVrefine2Falcon2Bionano_2275:HG2_PB_SVrefine2Falcon1plusDovetail_8880:HG2_Ill_manta_1325:HG2_Ill_GATKHCSBGrefine_3189:HG2_10X_allpass_759;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3476:HG4_PB_SVrefine2Falcon1Dovetail_2898:HG4_PB_HySA_7082:HG4_Ill_manta_1177:HG4_Ill_MetaSV_3828:HG4_Ill_GATKHCSBGrefine_3335:HG4_10X_allpass_889:HG3_PB_pbsv_4622:HG3_PB_SVrefine2Falcon1Dovetail_2926:HG3_Ill_manta_1092:HG3_Ill_SVrefine2DISCOVARDovetail_3651:HG3_Ill_GATKHCSBGrefine_3170:HG3_10X_allpass_929:HG2_PB_pbsv_4729:HG2_PB_SVrefine2PBcRplusDovetail_8248:HG2_PB_SVrefine2PB10Xhap12_3439:HG2_PB_SVrefine2Falcon2Bionano_2275:HG2_PB_SVrefine2Falcon1plusDovetail_8880:HG2_Ill_manta_1325:HG2_Ill_GATKHCSBGrefine_3189:HG2_10X_allpass_759;NumExactMatchSVs=21;ClusterMaxShiftDist=0.120718;ClusterMaxSizeDiff=0.120718;ClusterMaxEditDist=0.120718;PBcalls=12;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=22437;DistForward=-283;DistMin=-283;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=4:98133376-98133708;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2864.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:36:0|1:45:0:0:35:./.:0:0:0:0:0/1:24:23:0/1:31:13:.:.:.
chr4	98181261	HG4_Ill_GATKHCSBGrefine_3336	TAAAATTATACCCTGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_654:HG2_PB_HySA_8888:HG3_PB_assemblyticsfalcon_19753:HG2_PB_assemblyticsPBcR_19178:HG2_PB_pbsv_4730:HG4_Ill_MetaSV_3829:HG2_Ill_tnscope_521:HG4_PB_pbsv_4763:HG4_PB_SVrefine2PBcRDovetail_2421:HG4_PB_SVrefine2Falcon1Dovetail_2899:HG4_Ill_manta_1178:HG4_Ill_SVrefine2DISCOVARDovetail_3625:HG4_Ill_GATKHCSBGrefine_3336:HG4_10X_allpass_890:HG3_PB_SVrefine2Falcon1Dovetail_2927:HG2_PB_SVrefine2PBcRplusDovetail_8249:HG2_PB_SVrefine2Falcon2Bionano_2276:HG2_Ill_manta_1326:HG2_Ill_MetaSV_3648:HG2_Ill_GATKHCSBGrefine_3190:HG2_10X_allpass_760:HG2_10X_SVrefine210Xhap12_3477;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3477:HG2_10X_allpass_760:HG2_Ill_GATKHCSBGrefine_3190:HG2_Ill_MetaSV_3648:HG2_Ill_manta_1326:HG2_PB_SVrefine2Falcon2Bionano_2276:HG2_PB_SVrefine2PBcRplusDovetail_8249:HG3_PB_SVrefine2Falcon1Dovetail_2927:HG4_10X_allpass_890:HG4_Ill_GATKHCSBGrefine_3336:HG4_Ill_SVrefine2DISCOVARDovetail_3625:HG4_Ill_manta_1178:HG4_PB_SVrefine2Falcon1Dovetail_2899:HG4_PB_SVrefine2PBcRDovetail_2421:HG4_PB_pbsv_4763;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0984127;ClusterMaxSizeDiff=0.0984127;ClusterMaxEditDist=0.0984127;PBcalls=10;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-174;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:98181262-98181598;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2865.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:23:0|1:30:1:1:18:./.:0:0:0:0:0/1:25:20:0/1:18:5:.:.:.
chr4	98354290	HG2_PB_assemblyticsPBcR_19181	TGGTGAGGATAGAAAAAAGGGGACCCTTGCACACTGTTGGTGGGAGTGTTAATAAGGACAATTATTATGGAAAACAGTATGGAGATTACTCAAAAAATTAAAAATAGAACTACCATATGACCCAGCAATCACACTAGTGGGTATATATCCACAGAAAATGAAATCAGTATGTGGAAGAGATATCTGCACCCCCATGATTATTCCAGCATTATTCACAATAGCCAAGATAATGGAATTAGCCTAGGTATCCATTAACAGATGAATGGATAAAGGAAATGGGTTATGTATACACAATGGAATACTACTCAGCCTTAGAAAAGAAGGAAATCTTATCATTTGCAACAACATGGATGAACCTGAAAGATATTACATTAAGTGAAATAAACCAGGCACAGAAAGACAAATATCACATGATCTCACTTTATGTAGAATATTAAAAAGTCATACTCATAGAAACAAAGTAGAATGGTGGTTACCATGGGCTGCAAGAGAGAGGTTGGGAGATATGGTCAAAGGATCTAAAATTTCATATAGGTAGAAGGGATAAGTTCAAGAGATCAATTTGTATATGATAACTATAGCTAATAACAGTTTATTATATTCTTAAAAATCAAAGGTGAGTACACTCAAGTGTTTTCACCAAAAAAATATAAATATGTAAGGTAATGCATATGTACAATTTTATTTGTCAATTAAAAACATGAATGAATTTAATTTAAAAAGAAGGTGGTATTCAGTGGATCATGAGGATATGGAGAAGGGGAAGATGTTGGTTAAAGTTTTGGTTAGAAAGGATGAATAAGTTCTGGAGATCTATTGCACAGCATCATGACTATAGTTAATGATAATGTATATTTGACAATTTCTAAGAAAGTAGATCTGAAATGTTCTCATCACACACACATACACACATTAACTATGTGAGGTGATGGAGATATATATATATATAATTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCACCCAGGCTGCAGTGCAATGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACATGCACCTGCCACCACACCTGGCTAATTTTTTTGTATTTTTAGTAGAGACTGGGTTTCACCATGTTAGCCAGGATGGTCTTGATCTCCTGACCTTGTGATTCCCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCAACTGGCCAGTGATGGATATATTAACTGGCTTAATTGTAGTAATCATTTCATAATGTATACATACATCAAAACATCACATTGTACTCCAAAAATATACACAATTTTATTTGTCAATTATTCCTCCAGAAAGCTGGAAATATAGAAGAGAAAAAAATAAACATATATAATATTCCTAGGGAATAAAACTGCTTCATCAAAATGAGTTGTGTAATTATCAAATAAGAGATGCATTTTCTAAAAAAAATTGAATGTCAAGTGATAGTGATAATTCAATTGAAAAAGATGAAAACAAACTAGCTGAAGCAAATAGGAGACTTACTGGAGGACATTACTGGAAAAGATCAATTGGTGGTAGAGGAAGGCTCCTGTCAGATATTTGTCTGTGTGTGTGTGTTTATTTGAGAGAGAGAAAGAGAGAAGGAGAGAGGGCCAGGCAGGCAGGCAGGAAGGAAGGAAGGGAGAAGGGAGGGAGGCTGAGAGAGAGAAAGGATGTGTTGAATAGCCAAAGCAATAGCTATAACAAACTTTTACTTATGGAGCAAAAATATAATGGAAAATATAATAGAAATCAAATATAAACTGTAAATATATTTGAAATATCTAAATGTATATAAATAACAAAATTAATATAAATGTGGGTTTTTTTTGTTTGTTTTGTTTTGTTTTTTTGAGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAATGGCATGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGAATACAGGCACGCGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGATACAGGGTTTTACCATGTTGGCCAGGCTGGTCTGGAACTTCTGACCTCAGGTGATATGCCTGTCTCAGCCTCCCTAAGTACTGGGATTACAGGTGTGAACCACCCCATCTGGCCAATATAAATGTATTTTAAAATACAGTAAAAAATAAAGGTCCACTCCAAACAACAAATAAATGTTGGAACATAATTTAAAGGCTGATACAGTTTGGCTGTGTCCCCACCCATATCTCTTCTTGAATTGTAACTCCCACAATTCCTACATGTAGTGGGAGGGACCCAGTGGGAGGTGATTGAATTATGGGGGCAGGTCTTTCCTGTGCTGTTCTTGTGATAGTGAATGAGTCTCATGAGATCTGATGGTTTTAAAAACGGGATTTTCCCTGCACAGGCTCTCTTTTTGCCTGCTGCTATCCATGTAAGATGTGACTTGCTCCTCCTTGCCCTCAGCCATGACTGTGAGGCCTCCCCAGCCAAGTGGAACTGTGAGTCCAATTAAATCTCTTTCTTTTGTAAATTACCCACTCTTGGGTATATCTTTATCAGCAGTATGAAAATGGACTAATACAAAGACCTGCACCCATGAAATTTTCTAATCAATGGCTTCATTTTGGGAGGGCTGACAGCATTCACATATGTGACAGTAACCAACCTACTCAGCTGTTTAAAATGAAGGGCAGTTGGTATAATTGGAAACTAGCAAAATTCCACAAAATGATCAATTTTGTCAACAAATTAAATTTCATTTTCTGAATATTTCACTTTACAATTATGTTGCTAGCTTGTTTTTAGTTAACTGTCTCTTGAAGCTGAGAGGAGACACATTCAGACAGCTAATTTCAATCATGAAAATGACAGAAGATGTACGGCCTGTACACTTTGAATACTAAATCATTTTTCTAAGGAATAGATGCAAGGGCATTGCAACATATGTAATGCACTTTGAAACAGATATTTTCCAATCCAACACGTGGCTCTGAGGGAGAGGGCTCTAAGGGATGACTAACTTGTTTCTGTTCTCCCAGAATATAGTCCCTTGGTTTATCATGTCTGATTCCTTAAGGTACAGGCACCATCTGAGCTTTTATGTCCTACCTGTGTAGAGACCCATTTTGTTATGCATGTATGGGAGTGTCTAGAGCACATTAGTTAAGGTCATGCTACAACACATACATTTCTCAAATCTTAGTGGCTTAAGTTTATTTCTTATTCTTGTAAAATCCAGGGTGTTATCCAAATGGTCATTCATGACACAGCCTCCTTCCATTTTTAGGCTTCTGGGTGCTTCATTAGTGCACTCCCCTGAATTCCTCTGCATTAAGTTGGAAGACGGAAAAAAAGAGAATGGACTATTGGAAGCTGCTTACAGGCTAAAGTTGGAAGTGGCATATGTCATTTCTGCTCATATTTTATTGGCCATAACTCAATCATATTTTGCAAATAACTATTAGGTGAAAAGGCAAACTGGTTTGGTTAACAAAAGCAAGTCTGCTGAATGAGGAGACACCAAAACTTTTCATAGTCATACAACTTTACTATATAATCAAATTGCTATAACCTTCCCTTTGAAAACAAAGAACACACAAACTTCATTCATGTAACTACTTGCACGTTAAGTAACCCAACAGGTCATTTTATTATAGGTATAAAAGAGAAAGTGAGTACCTAGACATAATCGAAAAAACTGGGTGATACCATTTGGATATTTGTTCCCTCCAAATCTCATGATAAAATGTGACCCCCAGTGTTGGAGATGGGGTTAAGAGAGAGGTGTTGGGTTATGAGGGTTGATGCCTCGTGGATAGTTTAATGCTTTCCCCTCAGTAAAGAGTTCACAGGAGACCTGGTTATATTTGGCTCCCCATGTGTCCGGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAATGAAGCCGCAGACACTTGTGGTGAGTGTCACAGTTCTTAAATGCGGCATGTCCAGAGTTTGTTTCTTCTGATGTTTGGGTGTGTTGGGAGTTTCTTCCTTCTGGTGGGTTCGTGTCCTCGCTGGCTCAGGAGTGAAGCTACACACCTTCGCGGTGAGTGTTATAGCTCTTAAGGCGGCGCATCTGGAGTTGTTCATTCCTCCCGGTGGGTTCGTGGTCTCGCTGGCTTCAGGGGTGAAGCTGCAGACCTTTGCGGTGAGTGTTACAGCTCATAAAGGCAGTGTGGACCCAAAGAGTGAGCAGCAGCAAGATTTATAGCAAAGAGCAAAAGAACAAAGCTTCCACAGTGTGGAAGGGGACCCGAGCGGCTTGCCACTGCTGGCTGCGGCAGCCTGCTTTTTTTCTCTTATCTGGCCCCACCCACATCCTGCTGATTGGTCCATTTTACAGAGAGCCAATTGGTCTGTTTTACAGAGAGCTGATTGATCCGTTTTGACAGGGAGCTGATTGGTGCATTTACAATCCCTGAGCTAGACGCAGAAGTTCTCCATGTCCCCACTAGATTAGCTAGATACAGAGTGTCGATTGGTGTATTTACAAACTCTGAGCTAGACACAGAGTGCTGATTGGTGCATTTACAAACCTCGAGCTAGATACAGAGTGCCGATTGGTGCATTCACAAACCCTGAGCTAGACACAGGGTGCTGATTGGTGCATTCACAATCCCTTAGGTCGACATAAAGGTTCTCCAAGTCCCCACCAGATCAGCTAGATACAGAGTGCTGATTGGTGTATTCACAAACCCTGAGCTAGACAGAGTGCTGATTGGTGCATTTACAATCCCTTAGCTAGACATAAAGATTTTCCATGTCCCCACCAGACTCAGAAGCCCAGCTGGCTTCACCCAGTGGATCCCGCACCGGGGCCACAGGTGGAGCTGCCTGCCA	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_19754:HG4_10X_allpass_891:HG2_PB_PB10Xdip_22778:HG4_PB_pbsv_4764:HG2_10X_allpass_761:HG2_Ill_tnscope_522:HG4_PB_SVrefine2PBcRDovetail_2422:HG3_PB_SVrefine2Falcon1Dovetail_2928:HG2_PB_pbsv_4731:HG2_PB_assemblyticsfalcon_19821:HG2_PB_assemblyticsPBcR_19181:HG2_PB_SVrefine2PBcRplusDovetail_8250:HG2_PB_SVrefine2PB10Xhap12_3442:HG2_PB_SVrefine2Falcon2Bionano_2277:HG2_PB_SVrefine2Falcon1plusDovetail_8881:HG2_Ill_breakscan11_655:HG2_Ill_SpiralSDKrefine_12500:HG2_Ill_MetaSV_3649:HG2_10X_SVrefine210Xhap12_3479:HG4_Ill_MetaSV_3830;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3479:HG2_Ill_MetaSV_3649:HG2_Ill_SpiralSDKrefine_12500:HG2_Ill_breakscan11_655:HG2_PB_SVrefine2Falcon1plusDovetail_8881:HG2_PB_SVrefine2Falcon2Bionano_2277:HG2_PB_SVrefine2PB10Xhap12_3442:HG2_PB_SVrefine2PBcRplusDovetail_8250:HG2_PB_assemblyticsPBcR_19181:HG2_PB_assemblyticsfalcon_19821:HG2_PB_pbsv_4731:HG3_PB_SVrefine2Falcon1Dovetail_2928:HG4_PB_SVrefine2PBcRDovetail_2422;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00284669;ClusterMaxSizeDiff=0.00284669;ClusterMaxEditDist=0.00284669;PBcalls=12;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-4923;DistBack=28684;DistForward=-4922;DistMin=-4922;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:98354291-98359214;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2866.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:72:42:./.:23:4:8:5:./.:0:0:0:0:0/1:67:16:0/1:311:170:4927:.:.
chr4	98424904	HG2_PB_SVrefine2Falcon2Bionano_2278	AATATTTAAATATTTTAAAAATATATTTTCATATTCATATAAATATATTTTAAAAATATATTTAAATATTTTAAAAATATATTTTCATATTCATATAAATATATTTTAAAAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3480:HG4_PB_pbsv_4765:HG2_PB_pbsv_4732:HG3_PB_pbsv_4623:HG4_PB_SVrefine2PBcRDovetail_2423:HG4_PB_SVrefine2Falcon1Dovetail_2900:HG4_Ill_SVrefine2DISCOVARDovetail_3626:HG4_Ill_250bpfermikitraw_6663:HG4_Ill_150bpfermikitraw_6368:HG3_PB_SVrefine2PBcRDovetail_2157:HG3_PB_SVrefine2Falcon1Dovetail_2929:HG3_Ill_SVrefine2DISCOVARDovetail_3653:HG3_Ill_250bpfermikitraw_6390:HG3_Ill_150bpfermikitraw_6218:HG2_PB_SVrefine2PBcRplusDovetail_8251:HG2_PB_SVrefine2PB10Xhap12_3443:HG2_PB_SVrefine2Falcon2Bionano_2278:HG2_PB_SVrefine2Falcon1plusDovetail_8882:HG2_Ill_SVrefine2DISCOVARplusDovetail_9625:HG2_Ill_250bpfermikitraw_6614:HG2_Ill_150bpfermikitraw_6154;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3480:HG4_PB_SVrefine2PBcRDovetail_2423:HG4_PB_SVrefine2Falcon1Dovetail_2900:HG4_Ill_SVrefine2DISCOVARDovetail_3626:HG4_Ill_250bpfermikitraw_6663:HG4_Ill_150bpfermikitraw_6368:HG3_PB_SVrefine2PBcRDovetail_2157:HG3_PB_SVrefine2Falcon1Dovetail_2929:HG3_Ill_SVrefine2DISCOVARDovetail_3653:HG3_Ill_250bpfermikitraw_6390:HG3_Ill_150bpfermikitraw_6218:HG2_PB_SVrefine2PBcRplusDovetail_8251:HG2_PB_SVrefine2PB10Xhap12_3443:HG2_PB_SVrefine2Falcon2Bionano_2278:HG2_PB_SVrefine2Falcon1plusDovetail_8882:HG2_Ill_SVrefine2DISCOVARplusDovetail_9625:HG2_Ill_250bpfermikitraw_6614:HG2_Ill_150bpfermikitraw_6154;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00892857;ClusterMaxSizeDiff=0.00888889;ClusterMaxEditDist=0.0178571;PBcalls=11;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-112;DistBack=51643;DistForward=-113;DistMin=-113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=162;REFWIDENED=4:98424905-98425178;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2867.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:98:1/1:1:21:3:33:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr4	98590652	HG2_PB_SVrefine2Falcon1plusDovetail_8884	TGAAAGTTTATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_333:HG4_PB_pbsv_4767:HG4_Ill_Krunchall_7015:HG3_Ill_Krunchall_6622:HG2_PB_pbsv_4734:HG2_Ill_Krunchall_6748:HG3_PB_assemblyticsfalcon_19758:HG4_PB_assemblyticsfalcon_19379:HG2_PB_assemblyticsPBcR_19185:HG2_PB_HySA_8891:HG2_Ill_breakscan11_656:HG2_PB_HySA_8890:HG4_Ill_MetaSV_3832:HG3_Ill_MetaSV_3822:HG2_Ill_tnscope_523:HG2_Ill_MetaSV_3651:HG4_PB_SVrefine2PBcRDovetail_2425:HG4_PB_SVrefine2Falcon1Dovetail_2902:HG4_Ill_svaba_6178:HG4_Ill_scalpel_4567:HG4_Ill_manta_1179:HG4_Ill_SVrefine2DISCOVARDovetail_3628:HG4_Ill_GATKHCSBGrefine_3338:HG4_10X_allpass_893:HG3_PB_pbsv_4625:HG3_PB_SVrefine2PBcRDovetail_2159:HG3_PB_SVrefine2Falcon1Dovetail_2931:HG3_Ill_svaba_6179:HG3_Ill_scalpel_4746:HG3_Ill_manta_1093:HG3_Ill_SVrefine2DISCOVARDovetail_3657:HG3_Ill_GATKHCSBGrefine_3172:HG3_10X_allpass_931:HG2_PB_assemblyticsfalcon_19825:HG2_PB_SVrefine2PBcRplusDovetail_8253:HG2_PB_SVrefine2PB10Xhap12_3445:HG2_PB_SVrefine2Falcon2Bionano_2280:HG2_PB_SVrefine2Falcon1plusDovetail_8884:HG2_Ill_svaba_6056:HG2_Ill_scalpel_4661:HG2_Ill_manta_1328:HG2_Ill_SVrefine2DISCOVARplusDovetail_9627:HG2_Ill_GATKHCSBGrefine_3192:HG2_10X_allpass_762:HG2_10X_SVrefine210Xhap12_3482:HG4_Ill_Spiral_391:HG3_Ill_Spiral_5174;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3482:HG2_10X_allpass_762:HG2_Ill_GATKHCSBGrefine_3192:HG2_Ill_SVrefine2DISCOVARplusDovetail_9627:HG2_Ill_manta_1328:HG2_Ill_scalpel_4661:HG2_Ill_svaba_6056:HG2_PB_SVrefine2Falcon1plusDovetail_8884:HG2_PB_SVrefine2Falcon2Bionano_2280:HG2_PB_SVrefine2PB10Xhap12_3445:HG2_PB_SVrefine2PBcRplusDovetail_8253:HG2_PB_assemblyticsfalcon_19825:HG3_10X_allpass_931:HG3_Ill_GATKHCSBGrefine_3172:HG3_Ill_SVrefine2DISCOVARDovetail_3657:HG3_Ill_manta_1093:HG3_Ill_scalpel_4746:HG3_Ill_svaba_6179:HG3_PB_SVrefine2Falcon1Dovetail_2931:HG3_PB_SVrefine2PBcRDovetail_2159:HG3_PB_pbsv_4625:HG4_10X_allpass_893:HG4_Ill_GATKHCSBGrefine_3338:HG4_Ill_SVrefine2DISCOVARDovetail_3628:HG4_Ill_manta_1179:HG4_Ill_scalpel_4567:HG4_Ill_svaba_6178:HG4_PB_SVrefine2Falcon1Dovetail_2902:HG4_PB_SVrefine2PBcRDovetail_2425;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0797448;ClusterMaxSizeDiff=0.0797448;ClusterMaxEditDist=0.0797448;PBcalls=17;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=6423;DistForward=59243;DistMin=6423;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:98590653-98590983;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2868.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:77:1/1:2:27:1:31:./.:0:0:0:0:1/1:0:45:./.:2:14:.:.:.
chr4	100070288	HG3_Ill_GATKHCSBGrefine_3174	TGAAAAGACCCCTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_334:HG2_PB_HySA_8901:HG4_Ill_Krunchall_7025:HG3_Ill_Krunchall_6630:HG3_PB_assemblyticsfalcon_19768:HG2_PB_assemblyticsPBcR_19192:HG4_PB_assemblyticsfalcon_19389:HG2_PB_assemblyticsfalcon_19835:HG3_PB_pbsv_4628:HG4_PB_HySA_7097:HG2_PB_pbsv_4738:HG4_Ill_MetaSV_3835:HG3_Ill_MetaSV_3824:HG2_Ill_tnscope_525:HG2_Ill_MetaSV_3655:HG4_PB_pbsv_4773:HG4_PB_SVrefine2PBcRDovetail_2429:HG4_PB_SVrefine2Falcon1Dovetail_2906:HG4_Ill_svaba_6187:HG4_Ill_scalpel_4573:HG4_Ill_manta_1183:HG4_Ill_SVrefine2DISCOVARDovetail_3632:HG4_Ill_GATKHCSBGrefine_3342:HG4_10X_allpass_895:HG3_PB_SVrefine2PBcRDovetail_2164:HG3_PB_SVrefine2Falcon1Dovetail_2935:HG3_Ill_svaba_6186:HG3_Ill_scalpel_4751:HG3_Ill_manta_1095:HG3_Ill_SVrefine2DISCOVARDovetail_3661:HG3_Ill_GATKHCSBGrefine_3174:HG2_PB_SVrefine2PBcRplusDovetail_8256:HG2_PB_SVrefine2PB10Xhap12_3448:HG2_PB_SVrefine2Falcon2Bionano_2284:HG2_PB_SVrefine2Falcon1plusDovetail_8887:HG2_Ill_svaba_6064:HG2_Ill_scalpel_4666:HG2_Ill_manta_1331:HG2_Ill_SVrefine2DISCOVARplusDovetail_9634:HG2_Ill_GATKHCSBGrefine_3197:HG2_10X_allpass_763:HG2_10X_SVrefine210Xhap12_3488:HG2_Ill_breakscan11_657:HG3_Ill_Spiral_5181;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3488:HG2_10X_allpass_763:HG2_Ill_GATKHCSBGrefine_3197:HG2_Ill_SVrefine2DISCOVARplusDovetail_9634:HG2_Ill_manta_1331:HG2_Ill_scalpel_4666:HG2_Ill_svaba_6064:HG2_PB_SVrefine2Falcon1plusDovetail_8887:HG2_PB_SVrefine2Falcon2Bionano_2284:HG2_PB_SVrefine2PB10Xhap12_3448:HG2_PB_SVrefine2PBcRplusDovetail_8256:HG3_Ill_GATKHCSBGrefine_3174:HG3_Ill_SVrefine2DISCOVARDovetail_3661:HG3_Ill_manta_1095:HG3_Ill_scalpel_4751:HG3_Ill_svaba_6186:HG3_PB_SVrefine2Falcon1Dovetail_2935:HG3_PB_SVrefine2PBcRDovetail_2164:HG4_10X_allpass_895:HG4_Ill_GATKHCSBGrefine_3342:HG4_Ill_SVrefine2DISCOVARDovetail_3632:HG4_Ill_manta_1183:HG4_Ill_scalpel_4573:HG4_Ill_svaba_6187:HG4_PB_SVrefine2Falcon1Dovetail_2906:HG4_PB_SVrefine2PBcRDovetail_2429:HG4_PB_pbsv_4773;NumExactMatchSVs=27;ClusterMaxShiftDist=0.103226;ClusterMaxSizeDiff=0.103226;ClusterMaxEditDist=0.103226;PBcalls=17;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=37719;DistForward=-301;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:100070289-100070620;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2869.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:1:13:1:19:./.:0:0:0:0:1/1:0:38:./.:2:13:.:.:.
chr4	101244846	HG2_Ill_MetaSV_3656	ATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGCGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_659:HG3_PB_assemblyticsfalcon_19777:HG2_PB_assemblyticsPBcR_19201:HG4_Ill_Krunchall_7034:HG3_Ill_Krunchall_6638:HG2_Ill_Krunchall_6762:HG4_PB_assemblyticsfalcon_19395:HG2_PB_assemblyticsfalcon_19840:HG4_Ill_Spiral_392:HG3_PB_HySA_7310:HG3_Ill_Spiral_5185:HG2_Ill_Spiral_335:HG4_PB_pbsv_4778:HG3_Ill_MetaSV_3825:HG2_PB_HySA_8913:HG4_PB_SVrefine2PBcRDovetail_2431:HG4_PB_SVrefine2Falcon1Dovetail_2909:HG4_Ill_svaba_6197:HG4_Ill_scalpel_4576:HG4_Ill_manta_1185:HG4_Ill_SVrefine2DISCOVARDovetail_3639:HG4_Ill_MetaSV_3836:HG4_Ill_GATKHCSBGrefine_3344:HG4_10X_allpass_897:HG3_PB_pbsv_4634:HG3_PB_SVrefine2PBcRDovetail_2168:HG3_PB_SVrefine2Falcon1Dovetail_2939:HG3_Ill_svaba_6190:HG3_Ill_scalpel_4755:HG3_Ill_manta_1097:HG3_Ill_SVrefine2DISCOVARDovetail_3666:HG3_Ill_GATKHCSBGrefine_3179:HG3_10X_allpass_932:HG2_PB_pbsv_4743:HG2_PB_SVrefine2PBcRplusDovetail_8259:HG2_PB_SVrefine2PB10Xhap12_3452:HG2_PB_SVrefine2Falcon2Bionano_2286:HG2_PB_SVrefine2Falcon1plusDovetail_8889:HG2_Ill_svaba_6071:HG2_Ill_scalpel_4668:HG2_Ill_manta_1333:HG2_Ill_SpiralSDKrefine_12516:HG2_Ill_SVrefine2DISCOVARplusDovetail_9638:HG2_Ill_MetaSV_3656:HG2_Ill_GATKHCSBGrefine_3200:HG2_10X_allpass_764:HG2_10X_SVrefine210Xhap12_3493;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3493:HG2_10X_allpass_764:HG2_Ill_GATKHCSBGrefine_3200:HG2_Ill_MetaSV_3656:HG2_Ill_SVrefine2DISCOVARplusDovetail_9638:HG2_Ill_SpiralSDKrefine_12516:HG2_Ill_manta_1333:HG2_Ill_scalpel_4668:HG2_Ill_svaba_6071:HG2_PB_SVrefine2Falcon1plusDovetail_8889:HG2_PB_SVrefine2Falcon2Bionano_2286:HG2_PB_SVrefine2PB10Xhap12_3452:HG2_PB_SVrefine2PBcRplusDovetail_8259:HG2_PB_pbsv_4743:HG3_10X_allpass_932:HG3_Ill_GATKHCSBGrefine_3179:HG3_Ill_SVrefine2DISCOVARDovetail_3666:HG3_Ill_manta_1097:HG3_Ill_scalpel_4755:HG3_Ill_svaba_6190:HG3_PB_SVrefine2Falcon1Dovetail_2939:HG3_PB_SVrefine2PBcRDovetail_2168:HG3_PB_pbsv_4634:HG4_10X_allpass_897:HG4_Ill_GATKHCSBGrefine_3344:HG4_Ill_MetaSV_3836:HG4_Ill_SVrefine2DISCOVARDovetail_3639:HG4_Ill_manta_1185:HG4_Ill_scalpel_4576:HG4_Ill_svaba_6197:HG4_PB_SVrefine2Falcon1Dovetail_2909:HG4_PB_SVrefine2PBcRDovetail_2431;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0342205;ClusterMaxSizeDiff=0.0342205;ClusterMaxEditDist=0.0342205;PBcalls=17;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=18;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-264;DistBack=6652;DistForward=-260;DistMin=-260;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=4:101244847-101245115;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2870.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:./.:0:4:0:8:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr4	101293066	HG2_PB_SVrefine2Falcon1plusDovetail_8890	GGATTTAAGTGAGGCCTTAACTATAGAGTCTTTTGTATAATACCCCATCATGATTGTGCCAACCTCTACCA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_4744:HG4_Ill_Cortex_2696:HG3_Ill_Cortex_2712:HG2_PB_PB10Xdip_21183:HG2_Ill_Cortex_6419:HG2_Ill_SpiralSDKrefine_12517:HG4_PB_HySA_7109:HG3_Ill_Spiral_5186:HG2_PB_HySA_8914:HG4_Ill_svaba_6198:HG4_Ill_scalpel_4577:HG4_Ill_manta_1186:HG4_Ill_Krunchall_7035:HG4_Ill_250bpfermikitraw_6682:HG4_Ill_150bpfermikitraw_6382:HG4_10X_allpass_898:HG3_PB_HySA_7311:HG3_Ill_svaba_6191:HG3_Ill_manta_1098:HG3_Ill_250bpfermikitraw_6407:HG3_Ill_150bpfermikitraw_6231:HG3_10X_allpass_933:HG2_PB_assemblyticsfalcon_19841:HG2_PB_SVrefine2Falcon1plusDovetail_8890:HG2_Ill_svaba_6072:HG2_Ill_scalpel_4669:HG2_Ill_manta_1334:HG2_Ill_Krunchall_6763:HG2_Ill_250bpfermikitraw_6628:HG2_Ill_150bpfermikitraw_6167:HG2_10X_allpass_765:HG3_Ill_Krunchall_6639:HG4_PB_pbsv_4779:HG3_PB_pbsv_4635;NumClusterSVs=34;ExactMatchIDs=HG2_10X_allpass_765:HG2_Ill_150bpfermikitraw_6167:HG2_Ill_250bpfermikitraw_6628:HG2_Ill_Krunchall_6763:HG2_Ill_manta_1334:HG2_Ill_scalpel_4669:HG2_Ill_svaba_6072:HG2_PB_SVrefine2Falcon1plusDovetail_8890:HG2_PB_assemblyticsfalcon_19841:HG3_10X_allpass_933:HG3_Ill_150bpfermikitraw_6231:HG3_Ill_250bpfermikitraw_6407:HG3_Ill_manta_1098:HG3_Ill_svaba_6191:HG3_PB_HySA_7311:HG4_10X_allpass_898:HG4_Ill_150bpfermikitraw_6382:HG4_Ill_250bpfermikitraw_6682:HG4_Ill_Krunchall_7035:HG4_Ill_manta_1186:HG4_Ill_scalpel_4577:HG4_Ill_svaba_6198;NumExactMatchSVs=22;ClusterMaxShiftDist=0.028169;ClusterMaxSizeDiff=0.028169;ClusterMaxEditDist=0.0827586;PBcalls=9;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-70;DistBack=-30;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:101293065-101293137;PctSeqSimilarity=0.993;PctSizeSimilarity=0.9859;PctRecOverlap=0.9861;SizeDiff=-1;StartDistance=0;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=2871.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:65:1/1:5:22:2:21:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr4	101493373	HG2_Ill_SpiralSDKrefine_12519	CCACATCTAGCTTTCATTTTTACAGTAAACTCTCCATCCACATTTGAAATCTTCTTTTAAAATAATGTGTTGGGCTGGCTGTGGTGGCTCACACCCATAATCT	C	20	PASS	ClusterIDs=HG2_PB_HySA_8917:HG4_Ill_Krunchall_7039:HG4_Ill_Krunchall_7038:HG2_Ill_Krunchall_6765:HG2_PB_pbsv_4745:HG4_Ill_GATKHC_8008:HG4_Ill_GATKHCSBGrefine_3347:HG3_Ill_GATKHC_7946:HG3_Ill_GATKHCSBGrefine_3183:HG2_Ill_GATKHC_7937:HG2_Ill_GATKHCSBGrefine_3203:HG2_Ill_manta_1335:HG2_PB_PB10Xdip_21184:HG4_PB_pbsv_4780:HG3_PB_pbsv_4637:HG4_PB_SVrefine2PBcRDovetail_2432:HG4_PB_SVrefine2Falcon1Dovetail_2910:HG4_Ill_SVrefine2DISCOVARDovetail_3641:HG3_PB_SVrefine2PBcRDovetail_2170:HG3_PB_SVrefine2Falcon1Dovetail_2940:HG3_PB_HySA_7313:HG3_Ill_SVrefine2DISCOVARDovetail_3669:HG3_10X_allpass_935:HG2_PB_SVrefine2PBcRplusDovetail_8260:HG2_PB_SVrefine2PB10Xhap12_3453:HG2_PB_SVrefine2Falcon2Bionano_2287:HG2_PB_SVrefine2Falcon1plusDovetail_8891:HG2_Ill_SpiralSDKrefine_12519:HG2_Ill_SVrefine2DISCOVARplusDovetail_9640:HG2_10X_SVrefine210Xhap12_3495:HG4_PB_HySA_7111;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3495:HG2_Ill_SVrefine2DISCOVARplusDovetail_9640:HG2_Ill_SpiralSDKrefine_12519:HG2_PB_SVrefine2Falcon1plusDovetail_8891:HG2_PB_SVrefine2Falcon2Bionano_2287:HG2_PB_SVrefine2PB10Xhap12_3453:HG2_PB_SVrefine2PBcRplusDovetail_8260:HG3_10X_allpass_935:HG3_Ill_SVrefine2DISCOVARDovetail_3669:HG3_PB_HySA_7313:HG3_PB_SVrefine2Falcon1Dovetail_2940:HG3_PB_SVrefine2PBcRDovetail_2170:HG4_Ill_SVrefine2DISCOVARDovetail_3641:HG4_PB_SVrefine2Falcon1Dovetail_2910:HG4_PB_SVrefine2PBcRDovetail_2432;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0492611;ClusterMaxSizeDiff=0.0492611;ClusterMaxEditDist=0.06;PBcalls=15;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-102;DistBack=3854;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=103;REFWIDENED=4:101493374-101493578;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2872.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:61:1/1:5:23:4:25:./.:0:0:0:0:1/1:0:40:./.:.:.:.:.:.
chr4	102011990	HG3_Ill_250bpfermikitraw_6413	GACATATCTGTGTCTATATTATAATATACACACATATCTGTGTCTATATTATAATATACAC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3454:HG2_PB_assemblyticsfalcon_19845:HG2_PB_pbsv_4746:HG3_PB_pbsv_4639:HG3_Ill_svaba_6201:HG3_Ill_GATKHCSBGrefine_3187:HG3_Ill_250bpfermikitraw_6413:HG2_Ill_svaba_6080:HG2_Ill_SpiralSDKrefine_12525:HG2_Ill_GATKHC_7942:HG2_Ill_GATKHCSBGrefine_3206:HG2_Ill_250bpfermikitraw_6634:HG2_PB_SVrefine2Falcon2Bionano_2288:HG3_Ill_SVrefine2DISCOVARDovetail_3672:HG2_PB_SVrefine2PBcRplusDovetail_8261;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6634:HG2_Ill_GATKHCSBGrefine_3206:HG2_Ill_GATKHC_7942:HG2_Ill_SpiralSDKrefine_12525:HG2_Ill_svaba_6080:HG3_Ill_250bpfermikitraw_6413:HG3_Ill_GATKHCSBGrefine_3187:HG3_Ill_svaba_6201;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.180328;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-60;DistBack=34400;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=135;REFWIDENED=4:102011951-102012145;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2873.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:35:./.:7:20:3:4:./.:0:0:0:0:0/1:21:16:./.:.:.:.:.:.
chr4	102712356	HG4_Ill_GATKHC_8016	GTGTCTGCAACTTCTGAGGAGCTGGAACTTTCCCCAGCACCCGGGTCAGGGTCC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_4786:HG2_PB_HySA_8936:HG2_PB_assemblyticsPBcR_19216:HG4_PB_assemblyticsfalcon_19408:HG4_PB_SVrefine2PBcRDovetail_2433:HG4_Ill_svaba_6209:HG4_Ill_scalpel_4585:HG4_Ill_manta_1188:HG4_Ill_Krunchall_7047:HG4_Ill_GATKHC_8016:HG4_Ill_GATKHCSBGrefine_3351:HG4_Ill_Cortex_2700:HG4_Ill_250bpfermikitraw_6694:HG4_Ill_150bpfermikitraw_6392:HG4_CG_vcfBeta_3169:HG2_PB_pbsv_4752:HG2_PB_SVrefine2PBcRplusDovetail_8265:HG2_PB_SVrefine2PB10Xhap12_3459:HG2_Ill_svaba_6086:HG2_Ill_manta_1337:HG2_Ill_breakscan11_660:HG2_Ill_SpiralSDKrefine_12530:HG2_Ill_Krunchall_6774:HG2_Ill_GATKHC_7949:HG2_Ill_GATKHCSBGrefine_3209:HG2_Ill_Cortex_6425:HG2_Ill_250bpfermikitraw_6643:HG2_Ill_150bpfermikitraw_6179:HG2_CG_vcfBeta_2806;NumClusterSVs=29;ExactMatchIDs=HG2_CG_vcfBeta_2806:HG2_Ill_150bpfermikitraw_6179:HG2_Ill_250bpfermikitraw_6643:HG2_Ill_Cortex_6425:HG2_Ill_GATKHCSBGrefine_3209:HG2_Ill_GATKHC_7949:HG2_Ill_Krunchall_6774:HG2_Ill_SpiralSDKrefine_12530:HG2_Ill_breakscan11_660:HG2_Ill_manta_1337:HG2_Ill_svaba_6086:HG2_PB_SVrefine2PB10Xhap12_3459:HG2_PB_SVrefine2PBcRplusDovetail_8265:HG2_PB_pbsv_4752:HG4_CG_vcfBeta_3169:HG4_Ill_150bpfermikitraw_6392:HG4_Ill_250bpfermikitraw_6694:HG4_Ill_Cortex_2700:HG4_Ill_GATKHCSBGrefine_3351:HG4_Ill_GATKHC_8016:HG4_Ill_Krunchall_7047:HG4_Ill_manta_1188:HG4_Ill_scalpel_4585:HG4_Ill_svaba_6209:HG4_PB_SVrefine2PBcRDovetail_2433:HG4_PB_assemblyticsfalcon_19408;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0761905;ClusterMaxSizeDiff=0.0761905;ClusterMaxEditDist=0.0952381;PBcalls=8;Illcalls=19;TenXcalls=0;CGcalls=2;PBexactcalls=5;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=2;HG2count=16;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-53;DistBack=-53;DistForward=75376;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=4:102712357-102712412;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2874.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:./.:10:13:17:8:./.:0:0:0:0:0/1:36:23:./.:.:.:.:.:.
chr4	102787786	HG4_10X_allpass_899	TAGGAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACGCCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAATTTAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_4787:HG4_Ill_Krunchall_7048:HG3_PB_assemblyticsfalcon_19793:HG4_PB_assemblyticsfalcon_19409:HG2_Ill_tnscope_526:HG4_PB_SVrefine2PBcRDovetail_2434:HG4_PB_SVrefine2Falcon1Dovetail_2912:HG4_Ill_SVrefine2DISCOVARDovetail_3647:HG4_Ill_MetaSV_3840:HG4_Ill_GATKHCSBGrefine_3352:HG4_10X_allpass_899:HG3_PB_SVrefine2Falcon1Dovetail_2945:HG2_PB_pbsv_4753:HG2_Ill_manta_1338:HG2_Ill_SVrefine2DISCOVARplusDovetail_9644:HG2_Ill_MetaSV_3660:HG2_Ill_GATKHCSBGrefine_3210:HG2_10X_SVrefine210Xhap12_3497:HG2_Ill_breakscan11_661;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3497:HG2_Ill_GATKHCSBGrefine_3210:HG2_Ill_MetaSV_3660:HG2_Ill_SVrefine2DISCOVARplusDovetail_9644:HG2_Ill_manta_1338:HG2_PB_pbsv_4753:HG3_PB_SVrefine2Falcon1Dovetail_2945:HG4_10X_allpass_899:HG4_Ill_GATKHCSBGrefine_3352:HG4_Ill_MetaSV_3840:HG4_Ill_SVrefine2DISCOVARDovetail_3647:HG4_PB_SVrefine2Falcon1Dovetail_2912:HG4_PB_SVrefine2PBcRDovetail_2434;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0195382;ClusterMaxSizeDiff=0.0195382;ClusterMaxEditDist=0.0195382;PBcalls=7;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-565;DistBack=75376;DistForward=-563;DistMin=-563;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:102787787-102788352;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2875.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:21:0|1:48:0:0:19:./.:0:0:0:0:0/1:46:11:0/1:49:15:.:.:.
chr4	103241590	HG2_10X_SVrefine210Xhap12_3499	TATGAGAATATATATATGAGAGTATATATACATATGAGAATATATATATGAGAGTATATATATATGAGAATATATATATGAGAGTATATATATATGAGAATATATATATGA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_4646:HG2_PB_SVrefine2PBcRplusDovetail_8268:HG2_PB_SVrefine2PB10Xhap12_3463:HG2_10X_SVrefine210Xhap12_3499:HG2_PB_assemblyticsPBcR_19218:HG2_PB_pbsv_4756;NumClusterSVs=6;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3499:HG2_PB_SVrefine2PBcRplusDovetail_8268;NumExactMatchSVs=2;ClusterMaxShiftDist=0.22831;ClusterMaxSizeDiff=0.210046;ClusterMaxEditDist=0.273973;PBcalls=5;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-110;DistBack=148;DistForward=-81;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=531;REFWIDENED=4:103241314-103241954;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2876.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:35:./.:16:17:4:12:./.:0:0:0:0:0/1:19:23:./.:.:.:.:.:.
chr4	104894047	HG3_Ill_SVrefine2DISCOVARDovetail_3686	GGTTACTTATTGGGGCCAACACAATGTAACCATGTAAAACCAGTGAGATTGTATTGCTACCTCATGGCTAGAGTTCCAAGGTGAAAGCTATTGGATTCTTATTTGTGTGTGTATACATTTCTAGGTGTGTTTATGTGTATGTACATTTATTATGTTATATGCTGTGTCTACCAAATTGATTTATAAATAAAGGAGCACTCATAAATTAAGTAAATAAGTCCCAGCAATTTTCAAGTTCATGTGACATAAGTAAATCTTTATTAAACAAGCTGGCTTTAAAATTATTGGTGAAATAAAAATAGAAATGTCTTTATAATTGTCAGCATACATTTTTGTCTGGGTTTTATATTTGTCTTTGCTAGATGTTTTGAGGTGTCAGTGTTTGGCATAGAAGGTTATAAAGCTATTAACCCAGCCAAAACAAAATGGTCTTGATTTGTGTATCTTCTTTGACAAATGAGACTAATTTAATGTTGTTAGCTGAATCTTCTGAGTTATTGGCAAAAATGCTTATGTATTTAACTTTGAGGCTGTTGTTTGGATGAGTGTATGATGTTCACTGGCTATTAAAAAACAGTTAACAAAGAAATAACTAACTTTAAATGATGGTGTCTAATATCTCAGTTTTCAAAAG	TAT	20	PASS	ClusterIDs=HG4_PB_pbsv_4802:HG4_Ill_GATKHCSBGrefine_3364:HG3_Ill_GATKHCSBGrefine_3198:HG2_Ill_GATKHCSBGrefine_3221:HG4_PB_SVrefine2Falcon1Dovetail_2920:HG4_Ill_manta_1193:HG3_PB_assemblyticsfalcon_19805:HG3_PB_SVrefine2Falcon1Dovetail_2951:HG3_Ill_manta_1100:HG3_Ill_SVrefine2DISCOVARDovetail_3686:HG2_PB_SVrefine2PB10Xhap12_3471:HG2_PB_PB10Xdip_21210:HG2_Ill_manta_1343:HG2_10X_SVrefine210Xhap12_3510:HG2_Ill_tnscope_529:HG2_Ill_SpiralSDKrefine_12541:HG2_PB_HySA_8961:HG2_10X_allpass_768:HG4_Ill_Spiral_395:HG3_Ill_Spiral_5211:HG2_Ill_Spiral_338:HG4_PB_assemblyticsfalcon_19420:HG4_Ill_MetaSV_3845:HG4_10X_allpass_902:HG3_Ill_MetaSV_3833:HG3_10X_allpass_936:HG2_Ill_MetaSV_3666:HG2_PB_pbsv_4770:HG4_Ill_Krunchall_7070:HG3_Ill_Krunchall_6665:HG2_Ill_Krunchall_6795:HG3_PB_pbsv_4652;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3510:HG2_Ill_manta_1343:HG2_PB_PB10Xdip_21210:HG2_PB_SVrefine2PB10Xhap12_3471:HG3_Ill_SVrefine2DISCOVARDovetail_3686:HG3_Ill_manta_1100:HG3_PB_SVrefine2Falcon1Dovetail_2951:HG3_PB_assemblyticsfalcon_19805:HG4_Ill_manta_1193:HG4_PB_SVrefine2Falcon1Dovetail_2920;NumExactMatchSVs=10;ClusterMaxShiftDist=0.015873;ClusterMaxSizeDiff=0.015873;ClusterMaxEditDist=0.0159236;PBcalls=10;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-631;DistBack=15819;DistForward=28124;DistMin=15819;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:104894047-104894680;PctSeqSimilarity=0.9984;PctSizeSimilarity=1;PctRecOverlap=0.9968;SizeDiff=0;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2877.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:42:0|1:40:0:1:35:./.:0:0:0:0:0/1:63:20:0/1:53:13:.:.:.
chr4	105502847	HG2_PB_SVrefine2Falcon1plusDovetail_8901	GGCCCACCGCTGCACTGTGGGATCCCCTTTCTGGGCTGGCCAAGGCCAGAGCCCGCTCCCTCATTTGCAGGGAGGTGTGGAGGGAGAGGCGCGAGCGGGAACCGGGCTGCCCCCGCTGCACTGTGGGATCCCCTTTCTGGGCTGGCCAAGGCCAGAGCCCGCTCCCTCATTTGCAGGGAGGTGTGGAGGGAGAGGCGCGAGCGGGAACCGGGCT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3511:HG2_Ill_Krunchall_6796:HG2_PB_HySA_8962:HG4_PB_pbsv_4803:HG3_PB_pbsv_4653:HG2_PB_pbsv_4771:HG4_Ill_svaba_6226:HG4_10X_allpass_903:HG3_Ill_svaba_6219:HG3_Ill_MetaSV_3834:HG3_Ill_GATKHCSBGrefine_3199:HG3_10X_allpass_937:HG2_Ill_svaba_6105:HG2_Ill_SpiralSDKrefine_12542:HG2_10X_allpass_769:HG4_PB_SVrefine2PBcRDovetail_2439:HG4_PB_SVrefine2Falcon1Dovetail_2921:HG4_Ill_SVrefine2DISCOVARDovetail_3665:HG3_PB_SVrefine2Falcon1Dovetail_2952:HG3_Ill_SVrefine2DISCOVARDovetail_3689:HG2_PB_SVrefine2PBcRplusDovetail_8275:HG2_PB_SVrefine2PB10Xhap12_3472:HG2_PB_SVrefine2Falcon2Bionano_2299:HG2_PB_SVrefine2Falcon1plusDovetail_8901:HG2_Ill_SVrefine2DISCOVARplusDovetail_9662;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3511:HG4_PB_SVrefine2PBcRDovetail_2439:HG4_PB_SVrefine2Falcon1Dovetail_2921:HG4_Ill_SVrefine2DISCOVARDovetail_3665:HG3_PB_SVrefine2Falcon1Dovetail_2952:HG3_Ill_SVrefine2DISCOVARDovetail_3689:HG2_PB_SVrefine2PBcRplusDovetail_8275:HG2_PB_SVrefine2PB10Xhap12_3472:HG2_PB_SVrefine2Falcon2Bionano_2299:HG2_PB_SVrefine2Falcon1plusDovetail_8901:HG2_Ill_SVrefine2DISCOVARplusDovetail_9662;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00938967;ClusterMaxSizeDiff=0.00938967;ClusterMaxEditDist=0.00943396;PBcalls=11;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-213;DistBack=45021;DistForward=-104;DistMin=-104;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=110;REFWIDENED=4:105502848-105503170;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9953;PctRecOverlap=0.9766;SizeDiff=1;StartDistance=-5;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=2878.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:100:1/1:1:30:0:28:./.:0:0:0:0:0/1:8:35:./.:.:.:.:.:.
chr4	107056579	HG2_10X_SVrefine210Xhap12_3516	TCTGGAGAATGTACACTTAACCACATCACTACCCTGCCTCTCTTGTAAGATTCCATGTATGGAACCAAAGGTGCATACTATGAGAACTCAGGGAAAGAGTGAAACACAATATGGGCAGAAGTAGTTAGTAATATATTGGTGGAGTAAGTGGCACTTGAGTAAGGAAAACCAAGTAGGGTTTGGAAAAGAAGAAAAGAGAAGGAAGACTGTTGTAGAAGTGGGTTACTATAAAAGCTCTGGAGGAGCGCAGAAAAATTTGATAAATAGTTACTGAATACCTATTAGGTACCACTCACGGTACTTGGGATATTTCAATTAACAAAACAAAGATACTTGTTCTTATAAAAGTTAAAGTCAATGGGTGTAAAAATGACAATGGAGAGACTAGTCTCACTGAATTGACCATCCATCCTGAGAATCAGAGAAAATAGTATTGAATAGGTAGACAAGTGCCAGATTATGAGATCTCTGAAAGACAGAGAAGTCTGAGGATATAGATCAAACTTACAGATATGTACTGCAGGATTTTTCGAGGAATGTGTCACATAGTAATAACAGTATCTTAGGAATATTAATTTGGCTGTTTTTCCAAGAATGAAATAGAAATGGGAAAAATTAAAGGGAGAAAGACTTGCTAGAAAGTGTATTTTATTAATATCTAGATTAAGTGATGGCATTGGTAATCGAGAGCTTTGCTCAATTCTTTATCTCCTTTTTTTATTCAGTTTTTCCTTTACTGTTATTTTTCCTTTTCTGTTATTTTTCCTTGGTCTATAAATACATGCAATTCCATCCATCTACAGTAAACAGAAGGTAAATTAAAACAATAAATAATAAAACTACTCTTCAAGGAGTGAATCACTCCCAAGCTACTACCTCTCTACCTCCTTCTCATCTCTATTTTCTCCTTACCATTGTCTCCTGAACTCACTGCAACTTGGTTTCTGTCATGATACAGGAGGAGTAGTTCATTTGGCCAGAAAAGAAGTGGAAAACTGGGGAACGCTTCTTTGAAAAGGTAATATTTCAGTGGAGATTGAAAGGATGAATAGGAGTTTGCCGTATAAATAACTGGGGGTTTTCAAGTATAGTATTCTGTGTGAAATTGGGAAGGTACTTCGATTCTATTTCTAAGGCACTGGTTCTACCTTTAGGAGGTATGCTGAAGAAATCCTCTCATTTAAAGTCTTTTTATTCTCCCCCTCCCCCACCAACTTAACCTGGTATGAATGATGCAGAAAGTTCAGTCAGCATCCTATTTTAATTTGAATCCTAATTTCCTGAAGCTTAGTTCACAAATAGCCAATCAAAGTTTCTCAGGTTTATAGCCCCTACTCTATAAATCACTGCCACTGGTCTCTTTCAATATACCATGAGCTCCTGTTTTCATACCTCCATTGCCCAGCAGAGAGCCTGGAACTCAGTAGCTATTCAGTAAAATTGGTTAGATTAATGAAATGATAAAGAAAGAAAGATAGATGTATGAGAGCCTGTATAGGAAAATACAGAAAGAGAAAATATACAGGAGTTAAAGGTCAAGGATGAGTGAATAATGGCTCTTAAGTTTTGAACATGGTTGATTAGAAAAAAAGATATTAACAGTGACAGATGGCAGATAAAGGGAAGATATGTTTAAATCTAGATATGTGAAACTGAGATGGTACAGTGACACTTGTCACTGTCAAAGATGTGGTTAGAGATAAAAAGTGGCATCTGGAAGAAGTCATGGTTAGAATATCATATTCTTGGAATGATCAGCATAGAAATTGCAGTTTAGGTTATGAGAAAGGATAAACAATTTAAAGAAAAAAGAAAAAAAATTGACAAATATCTCAATTTTGGCAGGCAATCTATATAATGCTGAGAAAAATCTTAAATTGTATAATATTAATAAGACTTGTAAAAACATAAATTTGAGATTTTTAGGGTAATATTAATCAATTCTCATTTTTCCAAATGTTTACAATAAACAGACTCTAATTTCATAGTGGTAGGTATTTCAAGCTCATGCAAGAGGGGGTACAGGCTTTGTAAATGGCACAGACTATCACTCTCAAAGGAATTTTAACAAGAAAAGTTACCTTCAAAAACTATCAATCTACAAATATCATTTTGATCCATATATTTAAAACAATAAATTGTTTCAGTGACATTTTCAAGTTTTCATTTCTCCCTCTTAGTTTTAAATAGGAAGAGGTTTCTATTCATAAAATTTAGAAATACAGCATCTGATGTGGAGTTTGAAATAACTATCATACTCTGAAAGCTGCATAGTATAGCTCTCACACTAGAGAGAATCTCCTCCCCTCAAACAGAAGAGAGACAACATACATGAATATGAAATATAAAGAAAAGTAGAGACAGATTTTTTTTTTCAGTGATTAGAGACTTTATGCTAAAACGTTCACAGATGTACTCTGGAAAAATTGTGTACAAGCTAAGCTTCTGTAAAGAGAGTAATTTTTTCTTTGCTATACGGTATCATTCTGGAGACATTTTATCTCTCTGGGCCTCAGTTTTCTCAAATGATGGGCAGGAGTAGACAGTATTTGTACAGTCATGTGTTGCTTAACAAAGGGAATATGTTCTAAGAAATGTGTCATTAGGCAAGTGTGTTGTGCAAACATCATAGGGTGTATTTACACAAACAAAGATGGCATATATACTTATTTCATGTATTTTTTAATATGGAAAACCAAATGTCGCAGAACCATTACTGAATATCAATTATTTCCTCTAGTTGATCTGTAATGCCAGTATCAATTGCTATATATCAGGTTTCTGTATATGCTCTATCATAATCTCATGGGACCACGGTCATGTATGTAATCCGTTGTTGACTGAAATGTTGTTATGTGCTGCATGACTGTATTTTCTATTAAGTATATAATTCTATTACCTTATTTTTTAAATTTATATTCAACTGGCAAAAGGTCCCAAAACTCTTGCTTACTTTCTGAGACAAAAGTTAAAAACCAATACATAATACTTAATGACTCCACTGGAGTTTCTATTTAAGGAGATTCAGAAGTGATTCTAATTATGAGACTCAGTTAAGTGTTGTTCATGAACATGGCATGCTTATATAATCTTAGATCAATAAGAACTTGTTTATTTGAAAAGACAAATAATTGGGAAATATTTCATACAGTTTAAGTGGAAGAGGTTACAGTAAGTGAAGAACTCTAGTGTCACTGACTTATAAGGCAAAAACAGGGTCAAAGTGGCAATGTAGGGTGGTGTTGGTGTTGGTGTTGCTTTGCTACTAGGATATACGTTTCTATTAATATCCAGAAATAATTATTTAAAATAAAACCAGAACCAGGTAAGTTTCCTACACTCAGGTGAACAATATGAAAAAGTTAATGAGAGCAGCCCTACTTAGCTGGATAACTTCTGAAGGTAGAACTTTTGATAATTTTCTTCTGAAATGTGATAGAGATGCTATTCACACAGCACCGTTATGGTCAAGTTTCAATGGCAATACTGATCTGGAGTTTCAGTGAGTAGAGTCAGCTGGTGACAAGAGGTCACAGTAATTTAGTTAGTAGAACTGATGTTTTCATCTCAAACTCTAATTTTCCAAGGTACAATCTTGAATTGGGCTGCTGACTATATTACCCTTCACTCTCACCCTTATCCTCTTCCTTGTATACTAAAGTGATTAGTGCTAGCATTTTTGCTCTGGTCCTCCTTGTCACTTGGAATATTCTCCTTGCCCCCACATCACTCTCCTCACTAGATAACCAAAGGATGTCAACTAAATGATCAAAATACTCTCTGGCCAGACACTTATTCCCTGAGGAAGAAAGTCTGGAGATCTGCCTCTCTTCATTCTCACTGCTGTGCCAAATACAAGGTAAACAAGGTCTCTAAAGTACTTGTGATATTAACTGTTATTGCCATGATTGATTTCTGGGAAATATTCAGCTAATATCATGCATCAGCCAACCATTTACATTTGAATGCAATTAAGATGTCCCAAATAAAGGAAAATTCAAAAGTTTCAGCAATAAACACAAAAGACTGTTTAACATTTTAAATGAGAAGGAAGAGTATTCAGCTGTCTCTAATCTTTAATCATTTATTTTAACACACCACAAATCATCCCAGATGATTCTTACAAGAATATAGCTACAGAAGCATCAATGTCTACAATGTGTTTAGCTGTGAATACTGCAAACTTCTTTTAAATAGGAGAAAAAATTCTGATTTTTATGAGATCAGAAAGGTTATGTACATGCCACAGCCAACCTTAAAACCAGAGATCATAGAGATGTACTTTGAGTTTGTAATAGTATGACATATATTATGGAATATGAACTCATAAATTTGAATGGTTCCTTTCTATAACATTAAATTGGTTGGTACACATTTTTTCATATTTTCTTATTGAAAATAAAAGCATCTCAGGGGTAAGCTAATTATTCATTTAAGCTCTGAATAAAGTTCTACATTCTGAAACACAAATTGGGCATGAACAAGTACAGGATTTCTACAAGAAAATATAACAAATTATTTTATGTACAAAAAGCCTGTTAAATATAATAGCAGTTATAATGAATTAAAATTATCAGCTATATAATAAGTGAATTGTAATAGATGTATATAATAGATGAATTGTAATAGATGAATTACAATAATATTTATTGTAGATATATTCAATTTTACAGTTGTTAAATTAAAAAAGGTCTTCATATCTTCCTGTTGGTTTACTTTAATATGCAATAAAAGGTAATCTAAGACAAGAAAAAGTATTTGATAAATGGAGTTATGGGCAATATTTATTGTGGTGAAGTAAATCTTTAAAATACTATAGTGTCTATAAAATGTACAGATACATTTCAACACATATATTTTATTTAAAAAAAGTTTAAGTTCTTTTGCATTTCTGGCCACATTGCCAGAGATATTTGAATGTGTTTACAGGCATTTTTCATATAAATAAAATAAAATAGCTATTCTATTGCAAAACCAGATGATAAATTTATTGGTTAAAACACATGAGGCTACTTTAATTGAAATGGTAATAATGCTACAAATAAAAAAAACTACATATAATCAAGAATTAACCAACAAATGACAAATGGGAATATAAAGCCACAAGTTGGTACTAGCCTCTCAAGAAAGAAAATTTAAGAGTACTTATTATTGTGTATCACTAGAAACAACAATCACCTTTCCAAACAATCCAGGTACAAATAATGTCTTAGTTTTAAATTTAACTGAAATTTATTATTTAACTTTGGCTGAAAAATTTTCAGTAAGGTTTCATTGTTTTTCAAGTCTAGTTAAATTTTTTTTTTTTCTAATTCCCTCTCAAATCACAGGATTGCTCATTCTATGAATTTCTGTAATATCTCCACCCAGTGGTGATCAGAGACTTTAAATATACCCTTGACTTAAACCGAAAGTTTGGTAGTTTCTGATAGGATCAAGGCCCTCCACATAAATAGAAATTAGGACAGAGCCTAGATTTAAAGCTGGCTCTAAAATCAAAATAGTCTAAAATGGCAAAGCTCAGTAATCCATAGTCATGGCTTATATTTAGTTCCTATTGAATACCAGACAGTGTGTTGATAAGATATATGATAAAACTCTCAAGAAATCAGAATGCATGATACTTTTATGACATAATAAAATTTATCTCTCAAGCAAAAAGACAGCAAAACAATAGAAACACTGCCATTTAATGTAAGTGTAAGATAAAGATGTCCACCATTACCATTGTTATTTAATATTGTTCTAGAGAAAAAGGTGAAGCAATTAAATAATAGAAAGATATAAGATGTATAAAATTGAAAAAGGTAAAATTATAATTTGTAGATGATAAATAGAAAATTTGAATCAAATGAAAAATAATTACAAATAATGAGAGAACAGTAATATGGCTGATAAAAAGTAATAATGGTAATGGTGAAAACTTGCAGAGTATTTATATATACCAGCAGTATATATAAATATTCTCCATATATTAACTCAATCCTCCCAATAATCCTCTGAAGTATATAATATTATTATCACCATTTTATGAACAAGGAAACAGGCACAGAAAAGTCAAGAGAATTGTTCAAGGTTACACAGCTGGTGTGGCAGTGCTGTGATTCAAAAGTTTAAGAGTCTATGTCCTTAATCACTATATCAAACTGTTGGTGAAATCAACAATCTTTCTATGTATCAAAAACAATCAAATAAAATGTAATGAAATAAGATATCCCAATAATAACAACAAAAGGCTAAAATATCTAGTAATAACCCTGAAAAGAATTATCTAGAAAACCTTAAAATTCCACAGAGGATCCTAAAAAGGAGGACCTTAAATGGAAAGACATACCCTGTTTTTGGAAAAAATAATCATGCCATAGGTTAATTTTCTTCATTTAGCTATAAGTTTAATTCAATCACAATACTAAAATAATTTTTCCCAAGGGATAAAGAAAAAAGAAAGCTAATTCTACAATTTATGTAGAAACACAGCACCAAACACATGGTATAATTATAATCTTAACTCTTGGTACTAGAAAAGTAATAAACTAAGAAATATCATTTTAACCGAAAAAAGGACAAAGAAATAGCAAAATACATGTGGGAATCTAGTTTATCATAAAACCATATTTAGAATCAATGGGTTATCCAAGAAAATAAAGATTATTTTTATTAACTAATTCAAATATCCATTTGATAAGTATAAAAGTTTAAAATTTGTTAATTAAGTCAAATCTGTCAGGACTATTTAGCTTCGCTTTGCTAAGTGTTCTAGTTAATTTCTGTAGGATATCTAAAC	CA	20	PASS	ClusterIDs=HG3_Ill_Krunchall_6676:HG2_10X_allpass_770:HG2_Ill_SpiralSDKrefine_12550:HG3_PB_SVrefine2Falcon1Dovetail_2955:HG2_PB_assemblyticsfalcon_19876:HG2_PB_assemblyticsPBcR_19238:HG2_PB_SVrefine2PBcRplusDovetail_8277:HG2_PB_SVrefine2PB10Xhap12_3474:HG2_PB_SVrefine2Falcon2Bionano_2301:HG2_PB_SVrefine2Falcon1plusDovetail_8903:HG2_PB_PB10Xdip_21212:HG2_10X_SVrefine210Xhap12_3516:HG3_PB_pbsv_4657:HG2_PB_pbsv_4773:HG2_Ill_tnscope_530:HG3_10X_allpass_938:HG3_PB_assemblyticsfalcon_19815:HG3_Ill_MetaSV_3837:HG2_Ill_MetaSV_3668;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3516:HG2_PB_PB10Xdip_21212:HG2_PB_SVrefine2Falcon1plusDovetail_8903:HG2_PB_SVrefine2Falcon2Bionano_2301:HG2_PB_SVrefine2PB10Xhap12_3474:HG2_PB_SVrefine2PBcRplusDovetail_8277:HG2_PB_assemblyticsPBcR_19238:HG2_PB_assemblyticsfalcon_19876:HG3_PB_SVrefine2Falcon1Dovetail_2955;NumExactMatchSVs=9;ClusterMaxShiftDist=0.000737191;ClusterMaxSizeDiff=0.000737191;ClusterMaxEditDist=0.000737191;PBcalls=11;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-6782;DistBack=31720;DistForward=-6784;DistMin=-6784;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:107056579-107063362;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9999;PctRecOverlap=0.9999;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=2879.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:69:70:0|1:49:0:1:36:./.:0:0:0:0:0/1:68:13:0/1:391:182:6940:.:.
chr4	107419502	HG2_PB_SVrefine2PBcRplusDovetail_8278	TTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_4775:HG4_PB_SVrefine2PBcRDovetail_2442:HG4_PB_SVrefine2Falcon1Dovetail_2925:HG3_PB_SVrefine2Falcon1Dovetail_2956:HG3_Ill_GATKHCSBGrefine_3203:HG2_PB_SVrefine2PBcRplusDovetail_8278:HG2_PB_SVrefine2Falcon1plusDovetail_8904:HG2_Ill_SVrefine2DISCOVARplusDovetail_9666:HG2_10X_SVrefine210Xhap12_3517:HG3_PB_pbsv_4660:HG4_PB_HySA_7137:HG4_Ill_GATKHCSBGrefine_3367:HG4_PB_pbsv_4807;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3517:HG2_Ill_SVrefine2DISCOVARplusDovetail_9666:HG2_PB_SVrefine2Falcon1plusDovetail_8904:HG2_PB_SVrefine2PBcRplusDovetail_8278:HG3_Ill_GATKHCSBGrefine_3203:HG3_PB_SVrefine2Falcon1Dovetail_2956:HG4_PB_SVrefine2Falcon1Dovetail_2925:HG4_PB_SVrefine2PBcRDovetail_2442;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0426929;ClusterMaxSizeDiff=0.0426929;ClusterMaxEditDist=0.0525452;PBcalls=9;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-297;DistBack=42479;DistForward=-156;DistMin=-156;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=296;REFWIDENED=4:107419503-107420095;PctSeqSimilarity=0.9803;PctSizeSimilarity=0.9612;PctRecOverlap=0.9613;SizeDiff=-12;StartDistance=12;EndDistance=0;GTMatch=0;TruScore=96;MatchId=2880.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:0|1:24:0:2:31:./.:0:0:0:0:./.:6:1:./.:.:.:.:.:.
chr4	107974330	HG2_Ill_manta_1345	TGTCACATAGTGGGAGGAAATATTTGGAAACGAAATCTCCAGGCACTCTTTGAATTGTATCACGTAAGAGATCTCAAATCCTAAGATTCTTATTGGATAAATAATTTTTGAATTAGTGGATGCCATTTGAAAGACAATGCACTATCAGTGCATGAGAA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_4776:HG4_Ill_GATKHCSBGrefine_3368:HG3_Ill_GATKHCSBGrefine_3204:HG2_Ill_GATKHCSBGrefine_3224:HG3_PB_HySA_7355:HG2_PB_HySA_8974:HG2_Ill_SpiralSDKrefine_12553:HG4_PB_SVrefine2PBcRDovetail_2443:HG4_PB_SVrefine2Falcon1Dovetail_2927:HG4_Ill_manta_1195:HG4_Ill_SVrefine2DISCOVARDovetail_3670:HG4_Ill_Cortex_2706:HG4_CG_vcfBeta_3188:HG3_PB_SVrefine2Falcon1Dovetail_2958:HG3_Ill_manta_1101:HG3_Ill_SVrefine2DISCOVARDovetail_3694:HG3_Ill_Cortex_2721:HG3_CG_vcfBeta_2727:HG2_PB_assemblyticsfalcon_19884:HG2_PB_assemblyticsPBcR_19244:HG2_PB_SVrefine2PBcRplusDovetail_8279:HG2_PB_SVrefine2PB10Xhap12_3476:HG2_PB_SVrefine2Falcon2Bionano_2302:HG2_PB_SVrefine2Falcon1plusDovetail_8906:HG2_PB_PB10Xdip_21214:HG2_Ill_manta_1345:HG2_Ill_SVrefine2DISCOVARplusDovetail_9669:HG2_Ill_Cortex_6437:HG2_CG_vcfBeta_2819:HG2_10X_SVrefine210Xhap12_3519:HG2_Ill_breakscan11_663:HG4_PB_HySA_7141:HG4_Ill_MetaSV_3849:HG3_Ill_MetaSV_3840:HG2_Ill_MetaSV_3670:HG4_Ill_Spiral_396:HG3_Ill_Spiral_5223:HG2_Ill_Spiral_339:HG4_Ill_svaba_6238:HG4_Ill_scalpel_4606:HG4_10X_allpass_907:HG3_Ill_svaba_6232:HG3_Ill_scalpel_4776:HG3_10X_allpass_940:HG2_Ill_svaba_6118:HG2_Ill_scalpel_4695:HG4_PB_assemblyticsfalcon_19440:HG3_PB_assemblyticsfalcon_19824:HG4_Ill_MetaSV_3848:HG4_Ill_Krunchall_7084:HG3_Ill_Krunchall_6680:HG3_PB_pbsv_4663:HG4_PB_pbsv_4808;NumClusterSVs=53;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3519:HG2_CG_vcfBeta_2819:HG2_Ill_Cortex_6437:HG2_Ill_SVrefine2DISCOVARplusDovetail_9669:HG2_Ill_manta_1345:HG2_PB_PB10Xdip_21214:HG2_PB_SVrefine2Falcon1plusDovetail_8906:HG2_PB_SVrefine2Falcon2Bionano_2302:HG2_PB_SVrefine2PB10Xhap12_3476:HG2_PB_SVrefine2PBcRplusDovetail_8279:HG2_PB_assemblyticsPBcR_19244:HG2_PB_assemblyticsfalcon_19884:HG3_CG_vcfBeta_2727:HG3_Ill_Cortex_2721:HG3_Ill_SVrefine2DISCOVARDovetail_3694:HG3_Ill_manta_1101:HG3_PB_SVrefine2Falcon1Dovetail_2958:HG4_CG_vcfBeta_3188:HG4_Ill_Cortex_2706:HG4_Ill_SVrefine2DISCOVARDovetail_3670:HG4_Ill_manta_1195:HG4_PB_SVrefine2Falcon1Dovetail_2927:HG4_PB_SVrefine2PBcRDovetail_2443;NumExactMatchSVs=23;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.0638978;PBcalls=18;Illcalls=29;TenXcalls=3;CGcalls=3;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=3;HG2count=21;HG3count=15;HG4count=17;NumTechs=4;NumTechsExact=4;SVLEN=-157;DistBack=320;DistForward=20060;DistMin=320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:107974330-107974487;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2881.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:1:33:2:28:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr4	108063193	HG2_Ill_MetaSV_3671	TATATATATATATATATATATATCCTACTAGTATATATATGGAGTTTATTAGGAGTATTAACTGACACAATCACAAGGTCCCACAGCAGGCCATCTGCAAGCTGAGGAGCAAGGAAACCAGTTCATCCCAAAGATGAAGAACTTGGAGTCTGATGTTTGAAGGCAGGAAGCATCCAGCATGGGAGAAAGATGTAGGCTGGGAGACTGGCTAGCCGTTTCATGTTTTTCTGCCTGCTTTATATCCTGGCCCTTAATCTGGTTGGATCTGCCCTTCCCAGTCCATTGACTCAAATGTTAATCTCCTTTGGCAAAACCATTACAGACACACCCAGGATCAATATTTTGCATCCTTCAAGCCAATCAACTTGACACTCAATATTAATGATCACACCTTCATGATTGGATTAATACATTCATGGATTAGTGGATTAATGATTTAATGAAGTAATGAATTATCATGGGAGAGAAACCAGTGGCTTTATAAGAAGAGGAAGAAAGGCGTAAGCTAGCACTTAATGCCCTCAGCCCTCTAGGTATGTGATACCCTGCACTACCTCTGGACTCTTCAGAGAGTTCCCACAAGCAAGAAGGCCCTCACCAAGGTCTGCTGCCCCTCAACCCTGGGCTTCTAAGCCTCCATAACTATAAGAAATAAATTTCTTTTTTTAAAATAAATTACCCAGGTTCAGGTATTCTGTTACGAGCAACAGAAAACTGATTAGACGCTGACCATTTGTTGAATTGAAGGAAATTAGATTAAGAAATTTATTTAAAAACCCATTATTTTTTCAACATTAAGATGTTATGAGTCAGTAATGTGTATATGTCTCTGCACTAGAAGGTGCGAGCATTCGTAGAATATAAAGGTGCCAGTTGAGATTGGCTTATGATCAGAATGTGAAAGGAAAACAATTAGGTATTAATAATGCAGTCTATATCTGATATAGTAGTTATGTTGAAACCTGATCTAAATAGAAGCTCCTGTTCTTCTTATTCCATATTGCTTGCTAAGAAATATTCTCTGTTCTTCTAAATTAACACTCTGTTTGTACCAAATGAAGTATTTACGCAGCTTTAGCGCTTACATTGAGGTTCTCAGCTCTAAATAATTTTGGCACATGATTATCAATATAGAAGCTATGACTTATATATGTGCCTTTTACTGATGAATTTAGAGAGTGAACCGAGATTAACGGGCTTTACTACAATGTCTCTGAGTCAAGGGTCCACAAACCTCAATATGCTGGTCCATAGCCTGTTAGCAACCTGGCCGCACAGCATGAGGTGAGCCACAGGGAAGGGAGTGAAGCTTCATCTGTACTTAACAGCCGCTCCTCACTCACATTACTGCCTGAGCTCCATGCCCTATCTGATCAGCGGCAGCCTTAGATTCTCATAGGAGTGCAGACCCTATAGTGAACTGCACACACAAGACATCTACGTTGCTCACTCCTTACGAGAATCTGATGCCTAATGATCTGTCACTGTCTCCCATCACCCTTAGATGAGGCTGTCTAGTTGCAGGAAAATAAGCTAAAGACTCCCACTGATTCTACATTGTGATGAGTTGTGAAATTATATGTATATATATATATATATATATATATATATATATATATACACACACATATATATATATATTACAATGTAATAATAGAAAAAAGTGTACAGTAAATGTAATGTGCTTGAATCATCCTGAAACCATCCCTGCATCCCCCGGTTTGTGGAAAAATGTCTACCATGAAACTGGTCCCTGGTGCCAAAAAGTTTAGGTACCACTGATGTGAGGCACAGAGAAGTTTCTAAGGGGCTAAAACTACAAATCAGACAATTTTAAATTTTTAAATGAATCTTCAAGGCCAAACAAATTTAAACATCTCATCAGAAAGAATTGTACAATTTCTGTGCCTTGATAGTAGTTGTTATTTTATACCTGAATTATTCTTTTAAAACAAGCTTTCAATGCTGAATAAAACAATGTTTCAAAAGTAGTTAATTTCAAATTATTATCCTGTAAAAATTCCATCTAAATTAATACTAGTCAACATACAAGTATTATATGTGTATGTACTCCAAATTAAAGTAAATAAATGGGCTAATGTGACCTTTCTTTCAGATGCAGATGGGACCGTTGGCAAATATTTGACCTTTCTGAACTCTGTATAGTAACGTAAGTTACTAAGAATCTCTGGCTGTAATGGTAAGCTTTATTTGTCAACACATCAATGAAAAATCTATATTTGAATCCAATGAGTTCCAGTTCATTTGTGTATGAAAGCACACAATGTACTGTTTTAGGATGTGGGGTTGATTGGCTCATTTACCTTTAGATATAAACAATAGAATTTTTCTTAGATAAATATGATGCAATGTGAGCTATGTATTCTGACATGTAATGAATGGTTTGGAAGCCAGCAAGTTCCAGGAGAAATGTCATTCAGAACATCAATATATGAGCTACTTGCCAAACGATATTTTTACTCTGCTAGGGCATGCTTGAGTTTCAATTCAAGGAAGGAAGAATAAAATGGTATGTAGGATTATGCAGGAAATTTACGTCTCAGACACATGATAGGAAAAGAATACATCTCAAGAGACAACCTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCAGTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGAAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAGACAACCTCAGAGAAAGGAGTGATTTCTGAGTCTTTCCAAGTTTTCAGAAGACCACCATACAAGTTTTTTCTACATGTAAAAAATCCACTGAGGGGTGGGGAGGAGGGAGTAAAAGGGTTTCGATGAGCAATTCTCTATCTGCTTAATAAATTTGCTAACTTTGTAGACCTACTGGGTCCACTGGAATCTGTAGAGCCCATTCTGTATCACAGAGAGATGAAATATGCCTTTTATTTATTTATTTACTTATTTTTGCAATAGCTTTGGAGCAATACCGATGCAAGACTTTTTTTTTTCTTCCTAGAGTCCTACTCATGCACACATGTATCTTTAGGCTCATCTGAGACAGATTTATACAAGCAGGAAAGATTACATTCTCACCAAGTACATATCACTTATTCTTAAAATAAATTAATGGCTTGTCATGGGGAAAGGAGGGCAGTTAGAATTGCTCAAAAGAAAAAAAACATGTTTTGTGTAAATTATTACAAGAAAGCAGTGGCATATATAAAATGTACATAGGAAAACAAAAAGCTACATTCGGAGTCAAAAAGCATAATACATTTTATATCTTAATAGTATTCCTATTCCACAAAACAAACTAATTTTCAGCTCTTCCCTCTTTGTGCTTGCTTTGAAAATAAATTCACTTACCATAGTGTTTATCACAGTTATTTTCATGGCTTTTCTTATGTCATATCCCTAAAAAGTGCAAAAATTTATTGCCCTCTATGCAAAATTATTTTGATGCAATTCACATGTATCCCAAGCTTCAGTGACATTTGGTTATTATTAAATGATTACAGTGGAATGGAAAATAAGAAAGGAAAAGCATTTCAGTTCTTGGGCACAGTCACTTCAACCTCTTTAACTCTTTTACAACCATGAATTTTTTGTTCCATTAACAAAGCAATAGCTTTCTTAAACAGAAAAATAATAAAAGAAATGCAGCAAAAGAGGTGTAAGTCACAATATTTCTAAAATTATGTATCATTATAATATACATTCTGTCTAGAACTCCATTTCCGTTTCCTCCTTGACAAATTACACATATAGATTTCTTAGACCAATATTTTATATCAGAAATAATAGATTTGGGGAAAGATTATTCTGCTAAGGAACAATGTTACAAACTTGGTTGAATCTTATCCTTGTCCGAGTCCATTTGTGACAAAGTCTGTCCAGAATTGCATATTTTTGTTGACTTTCAGTTAGCCTTTACTCTGAGCAAAAACCAAGGGTCAATACCAGCTAAGTGATATTCTGGTCCTGAGGCTGGTACTTTATGGAGATCTGCTGGAGAGTAACTAATTATATAACAATTTTAAAGAATGCAAAAATCTTTCTGAGTTTTAGTTCTGCCCACTTTCTTTTTACATATTTCATTGATTTGTTGAATTAGCACAAATATATCTAATACTGAAAATGGGATGTTCCTTCTATATGTTTATGACAAGACTATGTGTCACAAACTATCAAGGCTCTCAAGGGGAAATTGGTTCTGCTTGCTAACTATTACTAGAAAAGAGTGCCTAAAATTATTCAGTTTAAAACCTAAATTATTTCTTGGGTAAGTTACCTTCCAAAATGTAATTGATTATATCTACACTATATAACAAGATAATTAATTCTTTTATTTAGTTACTTAAGTGTACATTTGCAATGAATCTATCTTGGCAGATTCACCAAGGAAATCGGTCTCTTAAAACCAGATGTTCTATCAATGTGTTTGATGAGTTAGTTTTTTGTTTGTTTGTTTTTTGTTGGTTTCTATAGCCATAGTGGGTGGCTGGTAACCCATGCTTTGGAAATGTTTCAGTGTAAATAATCTTGGTCACATACTATAGTGAAGAACTTTGAAGACTTAATAATTCATTTGTTCATATGCTAAAAAGAGCTACAGAAACTGTGTCTTTAGTAAACTCTTGGACCTGCCTACTCTATTGGCCCACTTCGATGTGGAGATTGGGTGGCCATCTATTCAAGAAGTAGTGTGGATTTTTGGTCTAGTTTTCAAAAGAGGTTGTCAGCCCTTCTATTTGGTTGGTTGATTTTTTAAATATAGAGTCTGTCTTTAATCAGTAACAAGAAATTGTTCCTTGCCAGAGAACATGCTTCCAAACTGTTTGCTAGCTAACTTCTATCAGAAGCCATTTGAAGGGAATTTCTGGAGACTTTTTTGAAGGATAAAATGACTGTCTCTCTCTAGACATCCAAGTTTTTAACCCCTAAATCAGTCTACATTATCAAAAAGCTTCCTATTTAGACCCTTTCTTAGCTTCCAACAAGATATTTACTTTGTTGTACTTGGTCCTCAGCTTATATTAATATTAATAGATATCCTGAAACATGTTTATGAAATGCACTACCATAGGTAATTAATAATGCTATTAAAATATCATCCACTACATCACACAGAATTTCCTACACAAAAACCCATTCAAAGACATGGGCCTTTGTGTTTGATCCTACAATTAACTAATGTGCCTTCTCCTTAAGTGATGATATGACTCCTGTACGCATCACAGTTCCTTTCATTTCAACTACCAAGAAGCTCAGAGTTAAATTTATTAATTAACATTTATTTCAGCATTTACAATATGCATTCTTTGTTCTAAATTATCCCTGAATTTGCTTTTCTATGTTCTTCATGGCCTTGACTTTTAAATTTATGTACATATTTTTGGGTTTTGTGTATATCATTGAAAGTTGTCTTAAAATATTTTCTTGAATAAGATGAGTTGTAGCTAAAGAGAAAGAAAATAAACTAGATGTTCCACTGTATTGTAAAAAGATTCTGAAAAAGATATGAGTAGAGGAGACGAAAAAGGCAAGATAAAGTCATGATGAAAAAAATAACTGAGCACCAAAGGTAAATAAAACAGAGGTAGTAATAATTCGTGAAATTAGAAGAATATTGAGATTAATATATAATAAGATTAAAGGAGGATGACTAAAAAGATAAATACAGATTGAAATGTAGTAAACAAAAAGAAATATAAACCAAAAGACAAAGTCAGTATGTTGGAATAAGTCGAATACTTTGACACATACACAGCAGCAAAACCATTCAAGTAATGTGCTGACAGAAAAGTCAACACTGCTCCTGTGCATTATTGATGTGGTATTCTAGGGGAAACCAAAACCAGGTCACCATCTTCTAATGCCTATAAGGGTTGTTTTATGTGTGTTATATTCACAACAGCTTTTATTACATCACCAAACATTTACAATCCAATAGTTACAATGTTACTCTTATGTTCTCAAATCCATGAATTCACTTAATAGATCAACAAACTCAAATTTAATGAACAGAATGCTTTGAGTTGTGCTCCCTAAGAATCAATGAATTTGGAAGGATGCCAGAGGTTTGACGCACAAGATTATGCAGGGAAAGATGGTGATGACCCTTTCATGGGCCCAGTGCAGGTAGCCAGTGCTTCTCTTTCCTCTGTATCTTCCCAAATAATGCATTTGTATTTCCTTGTTTTTCTCTCAATAGTTTACTTTTGTCAGTGACTTTTAGAAAGTCGCTGAATTGCTAAGGCATTGGTTTTCAAAGTGTGGTCTCTCAGACCAGCAGTATCAGTCTTTCCTGGGAATGCAAATTCTAAGGCTGAGGAATAAAAGATTTGGGGGGGTGGGTAGGGCCTTGCAATCTGTGGTTCAGCAAGGCCTTCAGGTGATTGTAATGCACTTTGAGAACCACTGGACTAAAGGAATATTTGAATATGAGGAGATCATTCACAAGCATACTGAATGTGAGTGATAGGAATACAGACAGGGTTAGAAAAGGAGAATGGAAAACTGCAGAAAAAGAAAATAAGCAAGTGACAACTTCCCACTTTCTTGTACCAGAGACTCAAATGTGAGTTCGAGTTCATATTAATCTTTTAGTTTTCTTTTGTAATTTATTATTTGTATATTTGTGCCTATGCTGGTTTTCATTCTTCGTTTGTACTGAAAAGAGAAAGTCTGACACTAAGTTTAGTGAGGAAACTAGAACTACCTAATACTTCACATTCTCTAGACTTCCTTAACTCATTATCCTCAGACAGCATAACCCCCCAATTCCTAAGTCATTCTGCAAATGAGCAAGATTCCTTTTAGCTTTAGCTCCATACAGGGATCAACACCACCAGGGCAATTTAGTCACCCCTGAGGTAAGCCTCCGCAGCTGTTTAAACAGTGCATGGCCCATAACAACATGACAGTGTAGGGCAGGAAATAAAGAAGGATTCTATTTCCAACTGAACCTCTGATGGGAGTTGAAATAGGTGGTATTTGATTTCTGAAACTAGAATTCATTTGCTTATCATAAACCTTTCAGCAGCACACTTTCTCTCTCCCTCCAAGCACCATCACTCTTAAAAACACTTCCATTCCTGCAACTACTCCTTAATTATGGATTCCCATATAGGATCTGATGCTATCTTCTTTGAAAACAGGTATTTTTGGTTTTGAAATGTCTCTAAATTGTTACGGATTGAAAATTGCAACCTACTTCATAATCACTGGAGATGATTTAGACAAAAAAACAACGAAGATGGTCATAAAAAGATGGGCTTAAATGTTGAATTATTTAGCACGAGTGAGAGCAGATTAGTAAATAGATTGACCATGTAATTGCCAGATTTTTAAATCTGGGAAACTTTTCAGAGAGAATGAAGGGGGTGGCTGTTACAGACTTTGCCAAGACAACAGGCCCGCACTGGAACTGTTTTCAGTAAACAGGGAACAGGCTCACTGTATGACTAGGAGACTTATTGGCTAACTTCAAGTATATGAAAGATATTGAGAAAAATATTTATCATTTACTCTCTTTTTCCATGAAGACCAAATAGGAAAAAAAGCAGGACACTTTTTGTTGTTGATTTATATGTTTCTTGAGGGTCCTGCTATTATTGGGCTGATCATCTAATTATTAGACATATGTTTATATAAAATAATTATTTTTTATAAAATTACCAGACACAATTAGATCATCTTGACTTTCAAAATATTAATTGTAAAAATTAGTGACTGTGAGAGCTGTAGAGTTGCCACCCATGGGGACTCATTACCTCTGCTTATAAGTTACTGTCCTTAAACATAATAGGAACTCAGTCATTTTCATGAATTGTATTAAAATTCTACAGTTATACAGCTCTCTTAAAGAAAAATACTAAGATGTTGTTGTCACATTTTTTCCTAATCTACAGAGTTCAAAATTTCGTTCCCATTATTTGGAGGCCTCCCATATGTAAATATTTCCTCTGACTGTCTATACATTGTTGAGGGTTGGATTATAGAAATCCATTAAAACAAGTATAGGCAAGGCAGTTTCACATTGTTCACGTGATATTCTTTTAATAGTACATCCTCATGCACTGTTCCCTGTAGACCTCTTTCTTTTGCTACATGCCCTACATCCTACAAAACCTGAAATTTATCTGATGGGTCAAATTTAATCATAAAATTTGACACCATCAGATTTAATAATAAAACCTGACACTCAGAACCTTGACTTTCAGGAGCAAGAATTACAACATATGAGGAAAAGTGGAAGGAAAAAAGGAAGAGAAGAGAAGGGAAGGGGAGAGGAGCAGAGGTGGGGGATGGGGAGGGGAGGGGAGGGGCAGGGAGGGGAAGGGAAGACGTATGGCAGGGAAATTTTCAAGAGAAGAGTTCCCCAAAACATTTTGTGTCTTTAAGAAGTACTAAATATACCTCTACAAAACATTAAGGCAATAAAGGTGATCAATTCAGTGACTTTAGAATTTCATAAAACGCTCGTATCAGTGTCAAGAATTCAAAACAAATTGTTAGTTTTGAGGGTTTTTTTTTTTTTTTTGTCTCTTAGTCAATTCAACTAACATTGGATAGATACATCCTAGGGGTCATCACACACAGAACATGATTAGCAATATGATACTCTGTTATTGATTAAATATATACTTTCCTCTTTTCTCACTATAATATTGCATGCAACTCATGAGTAGTGCCAAATAGTCCCTCATGGAGAGAGATCAGTTCTGTTTGGGATGTCCTTGGAAGACTTCAAAAAGTAGAGCTTTGTTGAATTGGGTGCATCATATAAAGAGACAAGGAGAGAGAAAATAGAAAGTCATAGAGCAAACCAATTTTCCTAAAGATTTACAGTAGTCTTCCCTTATCCTTGGGGATACATTCCAAGACCCCCAGTGGATGCCTAAAACCTTAAAGAGCACCACACCCGATTGCTGTCAACTGGAACACATTTTCTGTTCATGTCTTTCACCCACAAATTTAATGCCTTTTCTATCATAACTAAGCATTCAGAATGCACTATGGTCATAACCTTTGCAGTATGAGGTGAAACAGCAAAACTAGCATGAATTCTTTTTCTTTCTTTACCACTTCATGGATAGAAGTTTTGTTTTTACTATATATTTTAGCAATCTCAGCATAATTATTTTTCCTTTCTTTAAGTCCTTTCACTTAAAGGAAGCACTTTATGACCTTTCTTTGGCATATCCGAATTGCCAGCACCACTACTTTTGCACTTTGGGGCCATTATTAAGTAAAATAAGGATTACTTAAACACAAGCACTGTAATACTGCAACAGTCAATATTATAACCAAGTTAATAGGGATTGATCTAAGGCTGCTAGGTGACTAACGACTAATGGGCAGGTAGGCTAGGCAGCATGGATCTGATAGACGAAGGAATGATTGATGTCTCGGGCAGGTTGGAGAGGGATAACACAAGATTTCATCACACTACTCAGAAGAGCATTCAATTTAAAATTTATGAATTATTTATTTCTTTCTATTTAATATTTTCAGACCACAGTTGACAACAGGTAGCTGAAACTGAGGAAAGTGAAAAACGGTGGATGAGGAGGGACTGCTGTAACTGGGGGCAGTGGTGAGAGAAACGGCCAAACACTCTATTGAGGTGAGATTTCTAGCTGTGGGGTTTGGATTTTATCTTGTGGGCTTAGGGAACCACTGAAAGTTTGTAGATGGTGATTTTAGGGCCTATGGAAAGTAGCCTTGTAGCAATGTACAGATGAGAATCATTGTGAAAACAAACAAACCAATATGGGCTTTATTTTAGTTACCAGAGAATGAAGCCAATGAAAATCTAAAATAGGGTGGTGGTGGTGGTCAGTAAGGGGAAAGGAAAGGATAAATACAAAATATACTGTGAAAGAGAAATCTAGATCAGTGGTCCCCAACCTTTCTGGCACCACGGATCAGTTTCATGGAAGACAATTTTTCCACTGAGGGGGAAGAGGGGAGGTTTCGTGGTGAAACAGTTCCATCTCAGATCATCAGGCATTAGTTAGATTCTCATAAGGAGCACACAACCTAGATCCCTCGCATGTGCAGTTCACCGTAGGGTTGTGCTCCTATGAGAATCTAATGCTACCGCTGATGTGACACCTCTTGCTATGCGGTTGGGTTCCTAACAGGCCACAGACCAGTAGTGGTCCACTGCCCGGGGTTTGGGAACCCCTGATCTAGATGCTACTATTACTACTGAATATGAAGGTCTAATAAGAAGGGGGAATTTAAACATTCTAAAATTATGAGTCTCCCTGACTGGGACTATTGAGGTACCACTGATGGGAGAAAGCCAGTGTGAAGAAGGGGAAGTTGGTGAAGCATGGAAATGGTATGTGAGAGAAGAGCGTTCTATTACGTATGATGAGTTGACAGAAACTCCCAGCAGAAATAGAGTAAACTGTTGATATGAACTACTAGACATGCAAGGCTTGAAGCTGAAGGAATGGATCAGATCTCTGATATGGCGAGTGTACACACACAGCCAAATAGGCCAAGAAGAGAAACCTGGGTGAGAAAAGATCCGGTAGAGGAAATAGAGCAAAGCGAGAACTATCCAACCAATCAGTGAAATACGAAGTGCCTATGAGGTATTTCTAAAATGCAATCTGATACAAGGAATTGGTTAATAGGGAGCCGCAAGAGCAGTAAAAGGATGCTGAGGTCACCCAAGATTAATAATTACAGCCACTGTCCCTAGGGCCGGGTAAACAAAGGAGAAGAGGTGGTAACAGTGGAACACAGGATTTGAAGGAGGGTCCCCATGGAGTTGGTGCTATGTGCTTTGGGGGAAGCTCTTGAAACTGGTTTTCTGATTTGCAGGCTGCGGGTGGCAGAGCTAGTCTGGTAGGTGCTAGAACTCAGTGGAGGGGGAACCGCTCAGCAGAAGTCCAGGAGTGTATGCCTCAGTAAGTGAGGAAACATTGGGGCATCTCATACTCCAGCCTTAAAGAAACCACATTCTAGTTCCCGCTAAGGCTGAGGCTGCAAGTGGTGAAAGACTCTGGAGGCTGGAGCCGACTGTCTGCTGTTGCTGGAACAATGCTGATAGAAACTGGAAAAACAGAAGGGAAGTCCTGTCTATCCTTTCACCTTCCAACCTCCCTTTCATGCCCCCTACTGGCAGAACGTAACAGGAAGCCAGCTGATAAGGAAGTCTGGGAAATGTTATCTGAAGACTCCCATGCCCACCCTCATAGAACAGTAGAAAAGGGCCTCTTGGAGTTGAGGAACAATAGCGAAATAATCAGCACATCTAGAGAGGAATGTGTTACAGAAGCCCAGGGAAGAGTGAGGTTTCAATAAGAAAGGGGAAGAAAACTTCAACAAATGCTGGAAATAGGTCAAGGAGAATGAACTAGGCAAAGACTTTTGAACTTGGTGATTAAGATAAAAATGAAATGTTCTTAAATGGATAAGCATTGGAGAAAATTTTCATTTAAAACCTTAGACACTACTTCCAATGTCTGTGATTCATCAGTTATGTCAGTTTCTCATTACCTTAAAAACTTCAAAAACAGTAAATAAAACTCTTATTATATCTATAGGGAATGATAACTAATATTCCAAAATATCTGTAAAAAAAAAACAAGAAATTATGTATATGCCACATAAAAGTATTAACAGTTAAGCATGCAATATTTTATTGTACCAAAATAGTTCTGATTTGCCCGATAAATTAATTTATAAAATATATTACTCTCTACTTTTTATTGTTATAAATACATTTTAGAATCCTTATTAAATTCCTTCTGAGTCTTCAGAAAGATGTGAGTAGCCCATGTTAGGAACTGATGACTTAATATTGTGTTAGCATGCCCCTGGCACTGTGGTGGAGAGTCTCAGCATGAAAGAGTGGCATAAAGAAAACGTTCTTCCTCCCTCCCACAGAGACGAGAATTCCATCACACCATCATCTCTGCTCTTTCCCTTTCCCCCCACAGAGCTTAAAAAATCTGCCTAGAATGTACATTCCACAGTCCTCTGAAGTATTATAGTAATATTAATAAATTCTTCACATGACATTTGGACAAAAGCCAGTGACAGATATAAAAATTGAGGTGTCTCTTAGGTCTGAAATGGGTTTTTAAAAATTTCCACGTTAAACAAAAAAGGAAAGCTACATTTTGGTAACTGTTAAGTGCAATGATTTCATAATAAGTATTAGGTAACCAGCTTACATTAAATATTATGAGTGTTAATATATTTATTTACTTTACAGAACATAGAAATAGCATGCTAGTAGAATGGTAGGTCAGAGGTTAAAAGAAAATTATTCTGGCTTCATGCAAAAGGAAAGAAATGGTCAAGCACTACAATAAAGCCTCCTCTTTTGATAAATTATCCCCCTTTCCCCTTCCAGGCAATATATAACATATATATAGGGAGGTTCTTTCAAGCCTCTGAAGTGCTATTTTCAGAAGCTCTGCTTCAGGACACCCTGGATTTGTTCATTTCTTCTACCAGTTTTTGTTTTAAAAAGCTATATGCAAGTGTGTTGTACACACACCCACACATATATCCATACACACACACAGTTTAGAGAGATTACTTAAAAAGTTGGTATTTTATAGAAAAACTTAAGCACACCCCTGGCCAGTAGAGTTCTGTCCAAGTTAATCCACACTG	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_6812:HG4_PB_pbsv_4809:HG2_PB_pbsv_4777:HG4_10X_allpass_908:HG2_10X_allpass_771:HG2_Ill_tnscope_531:HG4_PB_SVrefine2PBcRDovetail_2444:HG4_Ill_SVrefine2DISCOVARDovetail_3671:HG2_PB_SVrefine2PBcRplusDovetail_8280:HG2_PB_SVrefine2PB10Xhap12_3477:HG2_PB_SVrefine2Falcon1plusDovetail_8907:HG2_Ill_SVrefine2DISCOVARplusDovetail_9671:HG2_Ill_MetaSV_3671:HG2_10X_SVrefine210Xhap12_3521:HG3_PB_SVrefine2Falcon1Dovetail_2960:HG4_PB_SVrefine2Falcon1Dovetail_2928:HG4_Ill_MetaSV_3850;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3521:HG2_Ill_MetaSV_3671:HG2_Ill_SVrefine2DISCOVARplusDovetail_9671:HG2_PB_SVrefine2Falcon1plusDovetail_8907:HG2_PB_SVrefine2PB10Xhap12_3477:HG2_PB_SVrefine2PBcRplusDovetail_8280:HG4_Ill_SVrefine2DISCOVARDovetail_3671:HG4_PB_SVrefine2PBcRDovetail_2444;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00124485;ClusterMaxSizeDiff=0.00124485;ClusterMaxEditDist=0.00210109;PBcalls=8;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-12852;DistBack=-10;DistForward=-12850;DistMin=-12850;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:108063194-108076047;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2882.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:82:50:./.:10:24:55:0:./.:0:0:0:0:0/1:41:12:0/1:364:176:15765:.:.
chr4	108127808	HG3_PB_pbsv_4664	TAAAACATTAGGATTCTCTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACTTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATTGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGATGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGATGATGGGGTTTTCTAGATATACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGCGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGATTTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGTGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCC	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_6813:HG4_10X_allpass_909:HG2_10X_allpass_772:HG4_PB_assemblyticsfalcon_19442:HG3_PB_assemblyticsfalcon_19826:HG2_PB_assemblyticsfalcon_19888:HG2_PB_assemblyticsPBcR_19248:HG3_10X_allpass_941:HG2_PB_HySA_8977:HG2_Ill_tnscope_532:HG4_PB_pbsv_4810:HG4_PB_SVrefine2PBcRDovetail_2445:HG4_PB_SVrefine2Falcon1Dovetail_2929:HG4_Ill_SVrefine2DISCOVARDovetail_3672:HG4_Ill_MetaSV_3851:HG4_Ill_GATKHCSBGrefine_3369:HG3_PB_pbsv_4664:HG3_PB_SVrefine2Falcon1Dovetail_2961:HG3_Ill_SVrefine2DISCOVARDovetail_3695:HG3_Ill_MetaSV_3841:HG3_Ill_GATKHCSBGrefine_3205:HG2_PB_pbsv_4778:HG2_PB_SVrefine2PBcRplusDovetail_8281:HG2_PB_SVrefine2PB10Xhap12_3478:HG2_PB_SVrefine2Falcon2Bionano_2303:HG2_PB_SVrefine2Falcon1plusDovetail_8908:HG2_Ill_SVrefine2DISCOVARplusDovetail_9672:HG2_Ill_MetaSV_3672:HG2_Ill_GATKHCSBGrefine_3225:HG2_10X_SVrefine210Xhap12_3522:HG2_Ill_breakscan11_664:HG4_Ill_Krunchall_7086:HG3_Ill_Krunchall_6683;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3522:HG2_Ill_GATKHCSBGrefine_3225:HG2_Ill_MetaSV_3672:HG2_Ill_SVrefine2DISCOVARplusDovetail_9672:HG2_PB_SVrefine2Falcon1plusDovetail_8908:HG2_PB_SVrefine2Falcon2Bionano_2303:HG2_PB_SVrefine2PB10Xhap12_3478:HG2_PB_SVrefine2PBcRplusDovetail_8281:HG2_PB_pbsv_4778:HG3_Ill_GATKHCSBGrefine_3205:HG3_Ill_MetaSV_3841:HG3_Ill_SVrefine2DISCOVARDovetail_3695:HG3_PB_SVrefine2Falcon1Dovetail_2961:HG3_PB_pbsv_4664:HG4_Ill_GATKHCSBGrefine_3369:HG4_Ill_MetaSV_3851:HG4_Ill_SVrefine2DISCOVARDovetail_3672:HG4_PB_SVrefine2Falcon1Dovetail_2929:HG4_PB_SVrefine2PBcRDovetail_2445:HG4_PB_pbsv_4810;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0105169;ClusterMaxSizeDiff=0.0105169;ClusterMaxEditDist=0.0246249;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3906;DistBack=40922;DistForward=45275;DistMin=40922;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=4:108127809-108131734;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2883.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:122:1/1:0:31:0:34:./.:0:0:0:0:1/1:0:33:1/1:1:274:15765:.:.
chr4	108434417	HG4_PB_pbsv_4814	ATAATTATTGAACAGTATATATTCAATATAATTATTGAACAGTATATATTCAAT	A	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_2447:HG4_PB_pbsv_4814:HG3_PB_pbsv_4668:HG2_PB_pbsv_4782;NumClusterSVs=4;ExactMatchIDs=HG4_PB_pbsv_4814;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.037037;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-53;DistBack=-126;DistForward=42954;DistMin=-126;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:108434416-108434471;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9815;PctRecOverlap=0.8182;SizeDiff=-1;StartDistance=10;EndDistance=9;GTMatch=0;TruScore=93;MatchId=2884.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:28:0|1:35:1:2:25:./.:0:0:0:0:0/1:44:6:./.:.:.:.:.:.
chr4	109107674	HG2_Ill_scalpel_4701	TAATGTTTGTATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3528:HG2_PB_SVrefine2PB10Xhap12_3484:HG2_PB_assemblyticsPBcR_19256:HG3_PB_HySA_7365:HG2_PB_pbsv_4784:HG3_Ill_MetaSV_3844:HG2_Ill_tnscope_534:HG3_PB_pbsv_4670:HG3_Ill_manta_1103:HG3_Ill_GATKHCSBGrefine_3208:HG3_10X_allpass_943:HG2_Ill_scalpel_4701:HG2_Ill_SpiralSDKrefine_12561:HG2_Ill_MetaSV_3674:HG2_Ill_GATKHCSBGrefine_3229:HG2_10X_allpass_773:HG2_PB_SVrefine2PBcRplusDovetail_8284:HG2_PB_SVrefine2PB10Xhap12_3483:HG2_Ill_SVrefine2DISCOVARplusDovetail_9677;NumClusterSVs=19;ExactMatchIDs=HG2_10X_allpass_773:HG2_Ill_GATKHCSBGrefine_3229:HG2_Ill_MetaSV_3674:HG2_Ill_SpiralSDKrefine_12561:HG2_Ill_scalpel_4701:HG3_10X_allpass_943:HG3_Ill_GATKHCSBGrefine_3208:HG3_Ill_manta_1103:HG3_PB_pbsv_4670;NumExactMatchSVs=9;ClusterMaxShiftDist=0.241681;ClusterMaxSizeDiff=0.241681;ClusterMaxEditDist=0.242105;PBcalls=7;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-301;DistBack=-302;DistForward=-292;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=51;REFWIDENED=4:109107640-109107991;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2885.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:34:0|1:30:0:3:29:./.:0:0:0:0:0/1:17:21:0/1:19:4:.:.:.
chr4	109668296	HG2_Ill_150bpfermikitraw_6218	ATATATATAATATATATATATATATTATATATATATATATAATATATATATATAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_4786:HG3_Ill_svaba_6249:HG4_PB_HySA_7157:HG3_Ill_scalpel_4784:HG3_Ill_Krunchall_6694:HG3_Ill_250bpfermikitraw_6461:HG3_Ill_150bpfermikitraw_6283:HG3_PB_HySA_7368:HG4_Ill_scalpel_4615:HG4_Ill_manta_1197:HG4_Ill_Krunchall_7098:HG4_Ill_GATKHC_8063:HG4_Ill_GATKHCSBGrefine_3374:HG4_Ill_250bpfermikitraw_6736:HG4_Ill_150bpfermikitraw_6437:HG2_Ill_scalpel_4706:HG2_Ill_GATKHC_7998:HG2_Ill_GATKHCSBGrefine_3232:HG2_Ill_250bpfermikitraw_6683:HG2_Ill_150bpfermikitraw_6219:HG2_PB_HySA_8993:HG3_Ill_scalpel_4783:HG3_Ill_manta_1104:HG3_Ill_Krunchall_6693:HG3_Ill_GATKHC_8002:HG3_Ill_GATKHCSBGrefine_3210:HG3_Ill_250bpfermikitraw_6460:HG3_Ill_150bpfermikitraw_6282:HG2_PB_assemblyticsfalcon_19899:HG2_Ill_scalpel_4705:HG2_Ill_manta_1346:HG2_Ill_GATKHC_7997:HG2_Ill_GATKHCSBGrefine_3231:HG2_Ill_250bpfermikitraw_6682:HG2_Ill_150bpfermikitraw_6218:HG4_Ill_GATKHC_8062:HG4_Ill_GATKHCSBGrefine_3373:HG4_Ill_250bpfermikitraw_6735:HG4_Ill_150bpfermikitraw_6436:HG3_PB_pbsv_4673:HG4_PB_pbsv_4818:HG4_PB_SVrefine2PBcRDovetail_2451:HG2_PB_SVrefine2PBcRplusDovetail_8286:HG2_Ill_SVrefine2DISCOVARplusDovetail_9679;NumClusterSVs=44;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6218:HG2_Ill_250bpfermikitraw_6682:HG2_Ill_GATKHCSBGrefine_3231:HG2_Ill_GATKHC_7997:HG2_Ill_manta_1346:HG2_Ill_scalpel_4705:HG2_PB_assemblyticsfalcon_19899:HG3_Ill_150bpfermikitraw_6282:HG3_Ill_250bpfermikitraw_6460:HG3_Ill_GATKHCSBGrefine_3210:HG3_Ill_GATKHC_8002:HG3_Ill_Krunchall_6693:HG3_Ill_manta_1104:HG3_Ill_scalpel_4783;NumExactMatchSVs=14;ClusterMaxShiftDist=0.320611;ClusterMaxSizeDiff=0.320611;ClusterMaxEditDist=0.320611;PBcalls=9;Illcalls=35;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=14;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=-25;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=4:109668295-109668359;PctSeqSimilarity=0.9355;PctSizeSimilarity=0.871;PctRecOverlap=0.746;SizeDiff=-8;StartDistance=-8;EndDistance=-16;GTMatch=0;TruScore=85;MatchId=2886.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:37:1/1:1:16:0:8:./.:0:0:0:0:0/1:12:23:./.:.:.:.:.:.
chr4	109720945	HG3_Ill_SVrefine2DISCOVARDovetail_3702	AACCTCTGCCTCCTGGGTTCAAGTGACTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACACACCACCACACCCGGATAATTTTGTATTTTTACTAGAGATGGGGTTTCACCATTTTGGCCAGGTTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCTACCAAAGTGCTCAGATTACAGGCGTGAGCCACCGCACCCAGCCCCAGTTCATATTCTTATGTTGAATTATCTTATTTGTGGAATACTTATCACTATTTTATTGGATAATTGTTTTCCGGAGGACACAGCTTGGTTTAGAAGAAGTAAAGAACAGCCCCACCACCAAGTCTTTTCTGCTATCACTATTTGATGTTGATATCACAGAGAATAGAAGGGAAAATGCACATAGACTTATGTCTCTTGTATCGAGGGATTCTTTTGTTTGCTTGTTTTTGAGACAGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGGTCTCGGTTCAGTGTAACCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGACACCCGCCACCACGGCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGCTTCACCATATTAGCCAGGCTAGTCTCAAACTCCTGACCTTGTGATCTGCCTGCCTCGGCCTTCCAAAGTGCTGAGATTACAGGTGTGAGCCACTGCGCCCAGCCAAGGGATTCTTTATTATCAATTCTGAATCAGTAGAAAAGTCATGCAGATTTTAATATGAATTACATGCTCACTGTTGCATTGCATATTCACACACCCAATATTATCCCTGGATGACTTGTTCTTTTTTTCATTTGGTTAATTGCTTTCATTAATATATTATTTTAATTAGTACGTATTTGAGTGCCAACTATGTGCTGGACATTAAAGACATAAGGGCAAACAACACAGAGCTCTCTCTCTCTCTTCATGGAGTCATAGCATGTCAAAAGAGGCAAAGGGAGCACAGAGGAGAGCTACGTAACCAACACTGGAAAATCCAGAGAAGCTTCTCCAGAGGTAGTAACGTCTAAGCTGAGATTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTGATTTTTGAG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3675:HG4_PB_assemblyticsfalcon_19455:HG3_PB_assemblyticsfalcon_19839:HG2_PB_assemblyticsPBcR_19261:HG4_PB_SVrefine2Falcon1Dovetail_2934:HG2_PB_SVrefine2PBcRplusDovetail_8288:HG2_10X_allpass_774:HG3_PB_pbsv_4674:HG2_PB_pbsv_4787:HG3_Ill_GATKHCSBGrefine_3212:HG3_10X_allpass_944:HG3_Ill_MetaSV_3845:HG3_PB_SVrefine2Falcon1Dovetail_2966:HG3_Ill_SVrefine2DISCOVARDovetail_3702:HG2_PB_SVrefine2PBcRplusDovetail_8287:HG2_PB_SVrefine2PB10Xhap12_3486:HG2_PB_SVrefine2Falcon1plusDovetail_8914:HG2_Ill_SVrefine2DISCOVARplusDovetail_9682:HG2_10X_SVrefine210Xhap12_3529;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3529:HG2_Ill_SVrefine2DISCOVARplusDovetail_9682:HG2_PB_SVrefine2Falcon1plusDovetail_8914:HG2_PB_SVrefine2PB10Xhap12_3486:HG2_PB_SVrefine2PBcRplusDovetail_8287:HG3_Ill_SVrefine2DISCOVARDovetail_3702:HG3_PB_SVrefine2Falcon1Dovetail_2966;NumExactMatchSVs=7;ClusterMaxShiftDist=0.144054;ClusterMaxSizeDiff=0.144054;ClusterMaxEditDist=0.144054;PBcalls=11;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1162;DistBack=9724;DistForward=-1041;DistMin=-1041;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=209;REFWIDENED=4:109720946-109722316;PctSeqSimilarity=0.9309;PctSizeSimilarity=0.9991;PctRecOverlap=0.9072;SizeDiff=-1;StartDistance=-107;EndDistance=-108;GTMatch=0;TruScore=94;MatchId=2887.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:30:0|1:35:0:0:25:./.:0:0:0:0:./.:30:3:0/1:88:37:697:.:.
chr4	110142257	HG2_PB_assemblyticsPBcR_19266	ATAATATGCATAAGATATTAAGTACTAAATTATATGTGATGAGTAATTGATAAAATTACT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_340:HG4_PB_HySA_7166:HG2_PB_pbsv_4789:HG4_PB_pbsv_4821:HG4_Ill_svaba_6260:HG4_Ill_manta_1198:HG4_Ill_Krunchall_7109:HG4_Ill_GATKHC_8072:HG4_Ill_GATKHCSBGrefine_3376:HG4_Ill_Cortex_2710:HG4_Ill_250bpfermikitraw_6746:HG4_Ill_150bpfermikitraw_6448:HG2_PB_assemblyticsfalcon_19905:HG2_PB_assemblyticsPBcR_19266:HG2_Ill_svaba_6141:HG2_Ill_manta_1347:HG2_Ill_SpiralSDKrefine_12566:HG2_Ill_Krunchall_6829:HG2_Ill_GATKHC_8005:HG2_Ill_GATKHCSBGrefine_3233:HG2_Ill_Cortex_6444:HG2_Ill_250bpfermikitraw_6691:HG2_Ill_150bpfermikitraw_6225;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6225:HG2_Ill_250bpfermikitraw_6691:HG2_Ill_Cortex_6444:HG2_Ill_GATKHCSBGrefine_3233:HG2_Ill_GATKHC_8005:HG2_Ill_Krunchall_6829:HG2_Ill_SpiralSDKrefine_12566:HG2_Ill_manta_1347:HG2_Ill_svaba_6141:HG2_PB_assemblyticsPBcR_19266:HG2_PB_assemblyticsfalcon_19905:HG4_Ill_150bpfermikitraw_6448:HG4_Ill_250bpfermikitraw_6746:HG4_Ill_Cortex_2710:HG4_Ill_GATKHCSBGrefine_3376:HG4_Ill_GATKHC_8072:HG4_Ill_Krunchall_7109:HG4_Ill_manta_1198:HG4_Ill_svaba_6260;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0840336;PBcalls=5;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=2718;DistForward=12322;DistMin=2718;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=56;REFWIDENED=4:110142258-110142372;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2888.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:39:0|1:31:1:1:37:./.:0:0:0:0:0/1:24:32:./.:.:.:.:.:.
chr4	110498740	HG2_PB_SVrefine2PB10Xhap12_3489	TGGGTACTTGAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGACTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAGGCTCCGCCCCCCGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_666:HG2_10X_allpass_775:HG2_PB_assemblyticsPBcR_19268:HG4_Ill_Krunchall_7112:HG3_Ill_Krunchall_6702:HG3_Ill_Spiral_5239:HG3_PB_pbsv_4676:HG2_PB_SVrefine2PB10Xhap12_3490:HG2_PB_pbsv_4790:HG2_PB_PB10Xdip_21232:HG2_PB_PB10Xdip_21233:HG4_Ill_MetaSV_3855:HG3_Ill_MetaSV_3847:HG2_Ill_tnscope_535:HG2_Ill_MetaSV_3676:HG4_PB_pbsv_4824:HG4_PB_SVrefine2PBcRDovetail_2453:HG4_PB_SVrefine2Falcon1Dovetail_2936:HG4_Ill_scalpel_4624:HG4_Ill_SVrefine2DISCOVARDovetail_3684:HG4_Ill_GATKHCSBGrefine_3379:HG4_10X_allpass_912:HG3_PB_SVrefine2Falcon1Dovetail_2968:HG3_Ill_scalpel_4790:HG3_Ill_manta_1106:HG3_Ill_SVrefine2DISCOVARDovetail_3707:HG3_Ill_GATKHCSBGrefine_3214:HG3_10X_allpass_945:HG2_PB_SVrefine2PBcRplusDovetail_8290:HG2_PB_SVrefine2PB10Xhap12_3489:HG2_PB_SVrefine2Falcon2Bionano_2308:HG2_PB_HySA_9003:HG2_Ill_scalpel_4712:HG2_Ill_manta_1348:HG2_Ill_SpiralSDKrefine_12569:HG2_Ill_GATKHCSBGrefine_3235:HG2_10X_SVrefine210Xhap12_3530;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3530:HG2_Ill_GATKHCSBGrefine_3235:HG2_Ill_SpiralSDKrefine_12569:HG2_Ill_manta_1348:HG2_Ill_scalpel_4712:HG2_PB_HySA_9003:HG2_PB_PB10Xdip_21233:HG4_PB_pbsv_4824:HG4_PB_SVrefine2PBcRDovetail_2453:HG4_PB_SVrefine2Falcon1Dovetail_2936:HG4_Ill_scalpel_4624:HG4_Ill_SVrefine2DISCOVARDovetail_3684:HG4_Ill_GATKHCSBGrefine_3379:HG4_10X_allpass_912:HG3_PB_SVrefine2Falcon1Dovetail_2968:HG3_Ill_scalpel_4790:HG3_Ill_manta_1106:HG3_Ill_SVrefine2DISCOVARDovetail_3707:HG3_Ill_GATKHCSBGrefine_3214:HG3_10X_allpass_945:HG2_PB_SVrefine2PBcRplusDovetail_8290:HG2_PB_SVrefine2PB10Xhap12_3489:HG2_PB_SVrefine2Falcon2Bionano_2308;NumExactMatchSVs=23;ClusterMaxShiftDist=0.116535;ClusterMaxSizeDiff=0.116535;ClusterMaxEditDist=0.116535;PBcalls=14;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=7975;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=4:110498741-110499082;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2889.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:27:0|1:28:1:0:25:./.:0:0:0:0:0/1:27:27:0/1:35:4:.:.:.
chr4	110748458	HG2_10X_SVrefine210Xhap12_3531	TAATAAATTAGACTTTATTAGATTCTGGGTTTATTAACTTGGATATTATAATACAGCCTTATGGGAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_4794:HG4_PB_HySA_7172:HG4_PB_assemblyticsfalcon_19464:HG2_PB_assemblyticsfalcon_19908:HG2_PB_assemblyticsPBcR_19271:HG4_Ill_Spiral_398:HG3_PB_HySA_7376:HG3_Ill_Spiral_5242:HG2_PB_HySA_9007:HG2_Ill_Spiral_342:HG4_PB_SVrefine2Falcon1Dovetail_2938:HG4_Ill_svaba_6269:HG4_Ill_manta_1201:HG4_Ill_SVrefine2DISCOVARDovetail_3686:HG4_Ill_Krunchall_7114:HG4_Ill_GATKHC_8084:HG4_Ill_GATKHCSBGrefine_3380:HG4_Ill_Cortex_2711:HG4_Ill_250bpfermikitraw_6752:HG4_Ill_150bpfermikitraw_6454:HG4_CG_vcfBeta_3200:HG4_10X_allpass_913:HG3_PB_pbsv_4681:HG3_Ill_svaba_6261:HG3_Ill_scalpel_4791:HG3_Ill_SVrefine2DISCOVARDovetail_3709:HG3_Ill_Krunchall_6703:HG3_Ill_GATKHC_8013:HG3_Ill_GATKHCSBGrefine_3216:HG3_Ill_Cortex_2723:HG3_Ill_250bpfermikitraw_6469:HG3_Ill_150bpfermikitraw_6291:HG3_CG_vcfBeta_2738:HG3_10X_allpass_946:HG2_PB_SVrefine2PBcRplusDovetail_8293:HG2_PB_SVrefine2PB10Xhap12_3493:HG2_PB_SVrefine2Falcon2Bionano_2310:HG2_PB_SVrefine2Falcon1plusDovetail_8918:HG2_Ill_svaba_6147:HG2_Ill_scalpel_4713:HG2_Ill_manta_1349:HG2_Ill_SpiralSDKrefine_12570:HG2_Ill_SVrefine2DISCOVARplusDovetail_9687:HG2_Ill_Krunchall_6830:HG2_Ill_GATKHC_8010:HG2_Ill_GATKHCSBGrefine_3236:HG2_Ill_Cortex_6446:HG2_Ill_250bpfermikitraw_6693:HG2_Ill_150bpfermikitraw_6230:HG2_CG_vcfBeta_2835:HG2_10X_allpass_776:HG2_10X_SVrefine210Xhap12_3531:HG4_PB_pbsv_4829;NumClusterSVs=53;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3531:HG2_10X_allpass_776:HG2_CG_vcfBeta_2835:HG2_Ill_150bpfermikitraw_6230:HG2_Ill_250bpfermikitraw_6693:HG2_Ill_Cortex_6446:HG2_Ill_GATKHCSBGrefine_3236:HG2_Ill_GATKHC_8010:HG2_Ill_Krunchall_6830:HG2_Ill_SVrefine2DISCOVARplusDovetail_9687:HG2_Ill_SpiralSDKrefine_12570:HG2_Ill_manta_1349:HG2_Ill_scalpel_4713:HG2_Ill_svaba_6147:HG2_PB_SVrefine2Falcon1plusDovetail_8918:HG2_PB_SVrefine2Falcon2Bionano_2310:HG2_PB_SVrefine2PB10Xhap12_3493:HG2_PB_SVrefine2PBcRplusDovetail_8293:HG3_10X_allpass_946:HG3_CG_vcfBeta_2738:HG3_Ill_150bpfermikitraw_6291:HG3_Ill_250bpfermikitraw_6469:HG3_Ill_Cortex_2723:HG3_Ill_GATKHCSBGrefine_3216:HG3_Ill_GATKHC_8013:HG3_Ill_Krunchall_6703:HG3_Ill_SVrefine2DISCOVARDovetail_3709:HG3_Ill_scalpel_4791:HG3_Ill_svaba_6261:HG3_PB_pbsv_4681:HG4_10X_allpass_913:HG4_CG_vcfBeta_3200:HG4_Ill_150bpfermikitraw_6454:HG4_Ill_250bpfermikitraw_6752:HG4_Ill_Cortex_2711:HG4_Ill_GATKHCSBGrefine_3380:HG4_Ill_GATKHC_8084:HG4_Ill_Krunchall_7114:HG4_Ill_SVrefine2DISCOVARDovetail_3686:HG4_Ill_manta_1201:HG4_Ill_svaba_6269:HG4_PB_SVrefine2Falcon1Dovetail_2938;NumExactMatchSVs=42;ClusterMaxShiftDist=0.0451128;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.0601504;PBcalls=14;Illcalls=32;TenXcalls=4;CGcalls=3;PBexactcalls=6;Illexactcalls=29;TenXexactcalls=4;CGexactcalls=3;HG2count=23;HG3count=14;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-66;DistBack=43457;DistForward=48127;DistMin=43457;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:110748459-110748526;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2890.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:61:./.:0:3:0:4:./.:0:0:0:0:1/1:0:53:./.:.:.:.:.:.
chr4	111383200	HG4_Ill_manta_1203	GCTATGGCTCACACTATCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_4798:HG4_PB_HySA_7175:HG2_PB_HySA_9015:HG3_PB_assemblyticsfalcon_19851:HG4_Ill_Krunchall_7118:HG3_Ill_Krunchall_6709:HG2_Ill_Krunchall_6838:HG4_Ill_MetaSV_3857:HG3_Ill_MetaSV_3849:HG4_PB_SVrefine2Falcon1Dovetail_2941:HG4_Ill_scalpel_4629:HG4_Ill_manta_1203:HG4_Ill_SVrefine2DISCOVARDovetail_3689:HG4_Ill_GATKHCSBGrefine_3386:HG4_10X_allpass_914:HG3_PB_SVrefine2Falcon1Dovetail_2972:HG3_Ill_scalpel_4796:HG3_Ill_manta_1108:HG3_Ill_SVrefine2DISCOVARDovetail_3713:HG3_Ill_GATKHCSBGrefine_3220:HG3_10X_allpass_947:HG2_PB_assemblyticsfalcon_19915:HG2_PB_SVrefine2PB10Xhap12_3495:HG2_PB_SVrefine2Falcon2Bionano_2312:HG2_PB_SVrefine2Falcon1plusDovetail_8920:HG2_Ill_scalpel_4721:HG2_Ill_manta_1351:HG2_Ill_breakscan11_667:HG2_Ill_MetaSV_3677:HG2_Ill_GATKHCSBGrefine_3243:HG2_10X_allpass_777:HG2_10X_SVrefine210Xhap12_3535:HG4_PB_assemblyticsfalcon_19469:HG4_Ill_Spiral_399:HG2_Ill_Spiral_343:HG3_PB_pbsv_4683:HG2_Ill_tnscope_536:HG4_PB_pbsv_4833;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3535:HG2_10X_allpass_777:HG2_Ill_GATKHCSBGrefine_3243:HG2_Ill_MetaSV_3677:HG2_Ill_breakscan11_667:HG2_Ill_manta_1351:HG2_Ill_scalpel_4721:HG2_PB_SVrefine2Falcon1plusDovetail_8920:HG2_PB_SVrefine2Falcon2Bionano_2312:HG2_PB_SVrefine2PB10Xhap12_3495:HG2_PB_assemblyticsfalcon_19915:HG3_10X_allpass_947:HG3_Ill_GATKHCSBGrefine_3220:HG3_Ill_SVrefine2DISCOVARDovetail_3713:HG3_Ill_manta_1108:HG3_Ill_scalpel_4796:HG3_PB_SVrefine2Falcon1Dovetail_2972:HG4_10X_allpass_914:HG4_Ill_GATKHCSBGrefine_3386:HG4_Ill_SVrefine2DISCOVARDovetail_3689:HG4_Ill_manta_1203:HG4_Ill_scalpel_4629:HG4_PB_SVrefine2Falcon1Dovetail_2941;NumExactMatchSVs=23;ClusterMaxShiftDist=0.00902256;ClusterMaxSizeDiff=0.00902256;ClusterMaxEditDist=0.012012;PBcalls=13;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=42140;DistForward=-284;DistMin=-284;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:111383201-111383534;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2891.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:0|1:29:0:0:24:./.:0:0:0:0:0/1:27:27:0/1:26:10:.:.:.
chr4	111516319	HG4_PB_SVrefine2PBcRDovetail_2456	AATATCCTACATTAGTGTAAGTCTAGAAGTGGATTATTAATAGATGATATGAAACCTTTATTCAATTGATGTAGCCAAAAAACACATAACATTTTTAAACAGTCTTACCATTGCCTCATGTTGAGATTGCTGCATAACAAATTATCCCATAACTTAGCCTGGTGTCATGGTGCATGTCTGTAGTCACAGCT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_4799:HG3_Ill_Krunchall_6712:HG2_Ill_Krunchall_6842:HG4_PB_assemblyticsfalcon_19471:HG3_PB_assemblyticsfalcon_19852:HG2_PB_assemblyticsfalcon_19917:HG2_PB_assemblyticsPBcR_19279:HG2_PB_HySA_9016:HG4_PB_pbsv_4834:HG4_PB_SVrefine2PBcRDovetail_2456:HG4_PB_SVrefine2Falcon1Dovetail_2942:HG4_Ill_svaba_6274:HG4_Ill_scalpel_4630:HG4_Ill_manta_1204:HG4_Ill_SVrefine2DISCOVARDovetail_3690:HG4_Ill_MetaSV_3858:HG4_Ill_GATKHCSBGrefine_3387:HG4_Ill_250bpfermikitraw_6758:HG4_CG_vcfBeta_3204:HG4_10X_allpass_915:HG3_PB_pbsv_4684:HG3_PB_SVrefine2Falcon1Dovetail_2973:HG3_PB_HySA_7381:HG3_Ill_svaba_6269:HG3_Ill_scalpel_4798:HG3_Ill_manta_1109:HG3_Ill_SVrefine2DISCOVARDovetail_3714:HG3_Ill_GATKHCSBGrefine_3221:HG3_CG_vcfBeta_2740:HG3_10X_allpass_948:HG2_PB_SVrefine2PBcRplusDovetail_8296:HG2_PB_SVrefine2PB10Xhap12_3496:HG2_PB_SVrefine2Falcon2Bionano_2313:HG2_PB_SVrefine2Falcon1plusDovetail_8921:HG2_Ill_svaba_6155:HG2_Ill_scalpel_4723:HG2_Ill_manta_1352:HG2_Ill_SpiralSDKrefine_12579:HG2_Ill_SVrefine2DISCOVARplusDovetail_9692:HG2_Ill_MetaSV_3678:HG2_Ill_GATKHCSBGrefine_3244:HG2_Ill_250bpfermikitraw_6702:HG2_CG_vcfBeta_2839:HG2_10X_allpass_778:HG2_10X_SVrefine210Xhap12_3536:HG2_Ill_breakscan11_668:HG4_PB_HySA_7177:HG3_Ill_MetaSV_3850;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3536:HG2_10X_allpass_778:HG2_CG_vcfBeta_2839:HG2_Ill_250bpfermikitraw_6702:HG2_Ill_GATKHCSBGrefine_3244:HG2_Ill_MetaSV_3678:HG2_Ill_SVrefine2DISCOVARplusDovetail_9692:HG2_Ill_SpiralSDKrefine_12579:HG2_Ill_manta_1352:HG2_Ill_scalpel_4723:HG2_Ill_svaba_6155:HG2_PB_SVrefine2Falcon1plusDovetail_8921:HG2_PB_SVrefine2Falcon2Bionano_2313:HG2_PB_SVrefine2PB10Xhap12_3496:HG2_PB_SVrefine2PBcRplusDovetail_8296:HG3_10X_allpass_948:HG3_CG_vcfBeta_2740:HG3_Ill_GATKHCSBGrefine_3221:HG3_Ill_SVrefine2DISCOVARDovetail_3714:HG3_Ill_manta_1109:HG3_Ill_scalpel_4798:HG3_Ill_svaba_6269:HG3_PB_HySA_7381:HG3_PB_SVrefine2Falcon1Dovetail_2973:HG3_PB_pbsv_4684:HG4_10X_allpass_915:HG4_CG_vcfBeta_3204:HG4_Ill_250bpfermikitraw_6758:HG4_Ill_GATKHCSBGrefine_3387:HG4_Ill_MetaSV_3858:HG4_Ill_SVrefine2DISCOVARDovetail_3690:HG4_Ill_manta_1204:HG4_Ill_scalpel_4630:HG4_Ill_svaba_6274:HG4_PB_SVrefine2Falcon1Dovetail_2942:HG4_PB_SVrefine2PBcRDovetail_2456:HG4_PB_pbsv_4834;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0209424;ClusterMaxSizeDiff=0.0209424;ClusterMaxEditDist=0.0263852;PBcalls=17;Illcalls=24;TenXcalls=4;CGcalls=3;PBexactcalls=10;Illexactcalls=20;TenXexactcalls=4;CGexactcalls=3;HG2count=21;HG3count=13;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-190;DistBack=1054;DistForward=-189;DistMin=-189;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:111516320-111516511;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2892.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:./.:2:23:0:4:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr4	111808750	HG2_PB_SVrefine2Falcon1plusDovetail_8923	CAAAAATTTTACTTAACTAACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCATTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_669:HG4_Ill_Krunchall_7127:HG3_PB_pbsv_4686:HG3_Ill_Krunchall_6719:HG2_Ill_Krunchall_6848:HG4_PB_assemblyticsfalcon_19472:HG3_Ill_Spiral_5256:HG2_Ill_Spiral_344:HG4_PB_pbsv_4836:HG4_Ill_MetaSV_3859:HG3_Ill_MetaSV_3852:HG2_PB_HySA_9024:HG2_Ill_tnscope_537:HG2_Ill_MetaSV_3679:HG4_PB_SVrefine2PBcRDovetail_2458:HG4_PB_SVrefine2Falcon1Dovetail_2943:HG4_Ill_svaba_6283:HG4_Ill_scalpel_4634:HG4_Ill_manta_1205:HG4_Ill_SVrefine2DISCOVARDovetail_3692:HG4_Ill_GATKHCSBGrefine_3388:HG4_10X_allpass_916:HG3_PB_assemblyticsfalcon_19854:HG3_PB_SVrefine2Falcon1Dovetail_2975:HG3_Ill_svaba_6277:HG3_Ill_scalpel_4803:HG3_Ill_manta_1110:HG3_Ill_GATKHCSBGrefine_3223:HG3_10X_allpass_949:HG2_PB_pbsv_4801:HG2_PB_SVrefine2PBcRplusDovetail_8298:HG2_PB_SVrefine2PB10Xhap12_3498:HG2_PB_SVrefine2Falcon2Bionano_2314:HG2_PB_SVrefine2Falcon1plusDovetail_8923:HG2_Ill_svaba_6163:HG2_Ill_scalpel_4727:HG2_Ill_manta_1353:HG2_Ill_GATKHCSBGrefine_3245:HG2_10X_allpass_779:HG2_10X_SVrefine210Xhap12_3537;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3537:HG2_10X_allpass_779:HG2_Ill_GATKHCSBGrefine_3245:HG2_Ill_manta_1353:HG2_Ill_scalpel_4727:HG2_Ill_svaba_6163:HG2_PB_SVrefine2Falcon1plusDovetail_8923:HG2_PB_SVrefine2Falcon2Bionano_2314:HG2_PB_SVrefine2PB10Xhap12_3498:HG2_PB_SVrefine2PBcRplusDovetail_8298:HG2_PB_pbsv_4801:HG3_10X_allpass_949:HG3_Ill_GATKHCSBGrefine_3223:HG3_Ill_manta_1110:HG3_Ill_scalpel_4803:HG3_Ill_svaba_6277:HG3_PB_SVrefine2Falcon1Dovetail_2975:HG3_PB_assemblyticsfalcon_19854:HG4_10X_allpass_916:HG4_Ill_GATKHCSBGrefine_3388:HG4_Ill_SVrefine2DISCOVARDovetail_3692:HG4_Ill_manta_1205:HG4_Ill_scalpel_4634:HG4_Ill_svaba_6283:HG4_PB_SVrefine2Falcon1Dovetail_2943:HG4_PB_SVrefine2PBcRDovetail_2458;NumExactMatchSVs=26;ClusterMaxShiftDist=0.12272;ClusterMaxSizeDiff=0.12272;ClusterMaxEditDist=0.12272;PBcalls=13;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=3243;DistForward=168809;DistMin=3243;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=4:111808751-111809078;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2893.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:65:1/1:1:22:0:19:./.:0:0:0:0:1/1:0:46:0/1:2:8:.:.:.
chr4	113469974	HG2_PB_SVrefine2Falcon1plusDovetail_8927	TAAAAATGTAAAGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_345:HG4_Ill_Krunchall_7136:HG3_Ill_Krunchall_6726:HG2_Ill_Krunchall_6857:HG4_PB_assemblyticsfalcon_19486:HG3_PB_assemblyticsfalcon_19866:HG3_PB_pbsv_4693:HG4_PB_pbsv_4842:HG2_PB_pbsv_4807:HG4_Ill_MetaSV_3860:HG3_PB_HySA_7393:HG3_Ill_MetaSV_3854:HG2_Ill_tnscope_538:HG4_PB_SVrefine2Falcon1Dovetail_2948:HG4_Ill_manta_1207:HG4_Ill_GATKHCSBGrefine_3392:HG3_PB_SVrefine2PBcRDovetail_2182:HG3_PB_SVrefine2Falcon1Dovetail_2979:HG3_Ill_manta_1111:HG3_Ill_SVrefine2DISCOVARDovetail_3720:HG3_Ill_GATKHCSBGrefine_3226:HG3_10X_allpass_951:HG2_PB_assemblyticsfalcon_19930:HG2_PB_SVrefine2Falcon1plusDovetail_8927:HG2_Ill_manta_1355:HG2_Ill_SVrefine2DISCOVARplusDovetail_9696:HG2_Ill_MetaSV_3680:HG2_Ill_GATKHCSBGrefine_3250:HG2_10X_allpass_781:HG2_Ill_breakscan11_671:HG3_Ill_Spiral_5264;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_781:HG2_Ill_GATKHCSBGrefine_3250:HG2_Ill_MetaSV_3680:HG2_Ill_SVrefine2DISCOVARplusDovetail_9696:HG2_Ill_manta_1355:HG2_PB_SVrefine2Falcon1plusDovetail_8927:HG2_PB_assemblyticsfalcon_19930:HG3_10X_allpass_951:HG3_Ill_GATKHCSBGrefine_3226:HG3_Ill_SVrefine2DISCOVARDovetail_3720:HG3_Ill_manta_1111:HG3_PB_SVrefine2Falcon1Dovetail_2979:HG3_PB_SVrefine2PBcRDovetail_2182:HG4_Ill_GATKHCSBGrefine_3392:HG4_Ill_manta_1207:HG4_PB_SVrefine2Falcon1Dovetail_2948;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0996678;ClusterMaxSizeDiff=0.0996678;ClusterMaxEditDist=0.0996678;PBcalls=11;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=19977;DistForward=-294;DistMin=-294;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:113469975-113470296;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2894.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:43:0|1:37:5:3:28:./.:0:0:0:0:0/1:29:21:0/1:19:10:.:.:.
chr4	115624597	HG2_PB_assemblyticsPBcR_19299	AAAGTCTATCTTGTTTTGTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCAC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3687:HG2_PB_HySA_9046:HG4_Ill_Krunchall_7154:HG3_Ill_Krunchall_6745:HG2_Ill_Krunchall_6874:HG4_PB_assemblyticsfalcon_19501:HG3_PB_assemblyticsfalcon_19881:HG2_PB_assemblyticsfalcon_19947:HG4_Ill_Spiral_400:HG3_Ill_Spiral_5281:HG4_PB_pbsv_4853:HG4_PB_SVrefine2Falcon1Dovetail_2959:HG4_Ill_scalpel_4652:HG4_Ill_manta_1210:HG4_Ill_SVrefine2DISCOVARDovetail_3702:HG4_Ill_GATKHCSBGrefine_3402:HG4_10X_allpass_920:HG3_PB_pbsv_4704:HG3_PB_SVrefine2PBcRDovetail_2187:HG3_PB_SVrefine2Falcon1Dovetail_2989:HG3_Ill_scalpel_4821:HG3_Ill_manta_1117:HG3_Ill_SVrefine2DISCOVARDovetail_3731:HG3_Ill_GATKHCSBGrefine_3234:HG3_10X_allpass_955:HG2_PB_pbsv_4817:HG2_PB_assemblyticsPBcR_19299:HG2_PB_SVrefine2PBcRplusDovetail_8307:HG2_PB_SVrefine2PB10Xhap12_3509:HG2_PB_SVrefine2Falcon2Bionano_2323:HG2_PB_SVrefine2Falcon1plusDovetail_8935:HG2_Ill_scalpel_4743:HG2_Ill_manta_1359:HG2_Ill_SVrefine2DISCOVARplusDovetail_9710:HG2_Ill_MetaSV_3688:HG2_Ill_GATKHCSBGrefine_3258:HG2_10X_allpass_784:HG4_PB_HySA_7209:HG4_Ill_MetaSV_3867:HG3_PB_HySA_7412:HG3_Ill_MetaSV_3859:HG2_Ill_tnscope_540;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_784:HG2_Ill_GATKHCSBGrefine_3258:HG2_Ill_MetaSV_3688:HG2_Ill_SVrefine2DISCOVARplusDovetail_9710:HG2_Ill_manta_1359:HG2_Ill_scalpel_4743:HG2_PB_SVrefine2Falcon1plusDovetail_8935:HG2_PB_SVrefine2Falcon2Bionano_2323:HG2_PB_SVrefine2PB10Xhap12_3509:HG2_PB_SVrefine2PBcRplusDovetail_8307:HG2_PB_assemblyticsPBcR_19299:HG2_PB_pbsv_4817:HG3_10X_allpass_955:HG3_Ill_GATKHCSBGrefine_3234:HG3_Ill_SVrefine2DISCOVARDovetail_3731:HG3_Ill_manta_1117:HG3_Ill_scalpel_4821:HG3_PB_SVrefine2Falcon1Dovetail_2989:HG3_PB_SVrefine2PBcRDovetail_2187:HG3_PB_pbsv_4704:HG4_10X_allpass_920:HG4_Ill_GATKHCSBGrefine_3402:HG4_Ill_SVrefine2DISCOVARDovetail_3702:HG4_Ill_manta_1210:HG4_Ill_scalpel_4652:HG4_PB_SVrefine2Falcon1Dovetail_2959:HG4_PB_pbsv_4853;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0779221;ClusterMaxSizeDiff=0.0779221;ClusterMaxEditDist=0.0779221;PBcalls=17;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-273;DistBack=-706;DistForward=-260;DistMin=-706;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=4:115624598-115624881;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2895.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:75:1/1:1:31:0:26:./.:0:0:0:0:1/1:0:57:./.:.:.:.:.:.
chr4	116017285	HG3_Ill_scalpel_4823	AAACAAAACTGACTAAATCCCACTGTCCACCAAATCTACACTTGCAATTCTGATAATGGATAGAACATTACTCAACACATTTTTTAG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3510:HG3_PB_HySA_7415:HG2_PB_pbsv_4818:HG3_PB_pbsv_4705:HG3_Ill_svaba_6298:HG3_Ill_scalpel_4823:HG3_Ill_Krunchall_6748:HG3_Ill_GATKHCSBGrefine_3235:HG3_Ill_250bpfermikitraw_6509:HG3_Ill_150bpfermikitraw_6339:HG3_10X_allpass_956:HG2_PB_assemblyticsfalcon_19950:HG2_Ill_svaba_6184:HG2_Ill_manta_1360:HG2_Ill_SpiralSDKrefine_12605:HG2_Ill_Krunchall_6876:HG2_Ill_GATKHCSBGrefine_3259:HG2_Ill_250bpfermikitraw_6732:HG2_Ill_Spiral_346:HG3_PB_SVrefine2PBcRDovetail_2188:HG3_Ill_SVrefine2DISCOVARDovetail_3732:HG2_PB_SVrefine2PBcRplusDovetail_8309;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6732:HG2_Ill_GATKHCSBGrefine_3259:HG2_Ill_Krunchall_6876:HG2_Ill_SpiralSDKrefine_12605:HG2_Ill_manta_1360:HG2_Ill_svaba_6184:HG2_PB_assemblyticsfalcon_19950:HG3_10X_allpass_956:HG3_Ill_150bpfermikitraw_6339:HG3_Ill_250bpfermikitraw_6509:HG3_Ill_GATKHCSBGrefine_3235:HG3_Ill_Krunchall_6748:HG3_Ill_scalpel_4823:HG3_Ill_svaba_6298;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0229885;ClusterMaxSizeDiff=0.0229885;ClusterMaxEditDist=0.0232558;PBcalls=7;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-86;DistBack=11220;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=86;REFWIDENED=4:116017275-116017446;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2896.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:42:0|1:37:1:1:41:./.:0:0:0:0:0/1:19:20:./.:.:.:.:.:.
chr4	116421881	HG3_10X_allpass_957	ACTCTGAGGATAAACTACCACTGAGCATGCATGCACTTTTCTATGGTCTGAATGTGTGTTTCCCCAAAAGGCACATACTGAAATCCTATCCCGCAAGGGATGGTATTAGACAGTAAGGC	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_3261:HG3_Ill_Krunchall_6754:HG2_PB_assemblyticsfalcon_19953:HG2_PB_SVrefine2Falcon1plusDovetail_8937:HG2_PB_pbsv_4820:HG2_PB_SVrefine2PBcRplusDovetail_8311:HG2_PB_assemblyticsPBcR_19304:HG3_Ill_SVrefine2DISCOVARDovetail_3733:HG3_PB_pbsv_4707:HG3_Ill_GATKHCSBGrefine_3236:HG3_10X_allpass_957:HG2_PB_SVrefine2PB10Xhap12_3512:HG2_PB_SVrefine2Falcon2Bionano_2326;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3261:HG3_Ill_SVrefine2DISCOVARDovetail_3733:HG3_Ill_GATKHCSBGrefine_3236:HG3_10X_allpass_957:HG2_PB_SVrefine2PB10Xhap12_3512:HG2_PB_SVrefine2Falcon2Bionano_2326;NumExactMatchSVs=6;ClusterMaxShiftDist=0.19214;ClusterMaxSizeDiff=0.19214;ClusterMaxEditDist=0.20354;PBcalls=8;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-118;DistBack=839;DistForward=13094;DistMin=839;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=120;REFWIDENED=4:116421882-116422119;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2897.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:39:0|1:29:3:2:36:./.:0:0:0:0:0/1:27:8:./.:.:.:.:.:.
chr4	117095262	HG2_PB_pbsv_4824	AGTGGGGTGTTGAAGTTCCCCAATATTATTTTACCGTTTTCTGTCTCTTTTATTAGGTCTAGTAGTATTATTTTATGAATCTTTGTGTGCTAGTGTTGGCTACATATATACTTATGGTTATTGTATCTTCTTG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_6886:HG4_Ill_svaba_6313:HG4_Ill_scalpel_4658:HG4_Ill_manta_1212:HG4_Ill_MetaSV_3869:HG4_Ill_GATKHCSBGrefine_3404:HG4_CG_vcfBeta_3220:HG4_10X_allpass_922:HG2_PB_pbsv_4824:HG2_PB_assemblyticsfalcon_19957:HG2_PB_SVrefine2Falcon1plusDovetail_8938:HG2_Ill_svaba_6192:HG2_Ill_scalpel_4753:HG2_Ill_manta_1362:HG2_Ill_breakscan11_672:HG2_Ill_SpiralSDKrefine_12610:HG2_Ill_MetaSV_3690:HG2_Ill_GATKHCSBGrefine_3262:HG2_CG_vcfBeta_2856:HG4_PB_pbsv_4859:HG4_Ill_Krunchall_7166;NumClusterSVs=21;ExactMatchIDs=HG2_CG_vcfBeta_2856:HG2_Ill_GATKHCSBGrefine_3262:HG2_Ill_MetaSV_3690:HG2_Ill_SpiralSDKrefine_12610:HG2_Ill_breakscan11_672:HG2_Ill_manta_1362:HG2_Ill_scalpel_4753:HG2_Ill_svaba_6192:HG2_PB_SVrefine2Falcon1plusDovetail_8938:HG2_PB_assemblyticsfalcon_19957:HG2_PB_pbsv_4824:HG4_10X_allpass_922:HG4_CG_vcfBeta_3220:HG4_Ill_GATKHCSBGrefine_3404:HG4_Ill_MetaSV_3869:HG4_Ill_manta_1212:HG4_Ill_scalpel_4658:HG4_Ill_svaba_6313;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00754717;ClusterMaxSizeDiff=0.00754717;ClusterMaxEditDist=0.0150943;PBcalls=4;Illcalls=14;TenXcalls=1;CGcalls=2;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=2;HG2count=12;HG3count=0;HG4count=9;NumTechs=4;NumTechsExact=4;SVLEN=-132;DistBack=105337;DistForward=-91;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:117095263-117095394;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2898.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:./.:20:3:12:19:./.:0:0:0:0:0/1:37:26:./.:.:.:.:.:.
chr4	117151884	HG2_PB_SVrefine2PB10Xhap12_3515	CCTTCTCTTCTCAAGAATTGAAGAGAAGCTTCTCTTCTCAAGAATTGAAGAGAAG	C	10	PASS	ClusterIDs=HG4_PB_pbsv_4860:HG2_PB_pbsv_4825:HG4_PB_SVrefine2Falcon1Dovetail_2962:HG2_PB_SVrefine2PBcRplusDovetail_8313:HG2_PB_SVrefine2PB10Xhap12_3515;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3515:HG2_PB_SVrefine2PBcRplusDovetail_8313:HG4_PB_SVrefine2Falcon1Dovetail_2962;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0363636;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-54;DistBack=0;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=135;REFWIDENED=4:117151885-117152073;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2899.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:28:1|0:1:25:21:3:./.:0:0:0:0:./.:11:1:./.:.:.:.:.:.
chr4	117251478	HG4_Ill_scalpel_4659	ACAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_4711:HG2_PB_SVrefine2PB10Xhap12_3516:HG3_PB_HySA_7422:HG4_PB_assemblyticsfalcon_19509:HG3_PB_assemblyticsfalcon_19887:HG2_PB_assemblyticsfalcon_19959:HG4_Ill_Krunchall_7168:HG3_Ill_Krunchall_6762:HG2_Ill_Krunchall_6887:HG3_Ill_Spiral_5291:HG2_Ill_Spiral_347:HG3_Ill_MetaSV_3861:HG2_Ill_tnscope_541:HG2_Ill_MetaSV_3692:HG4_PB_pbsv_4861:HG4_PB_SVrefine2Falcon1Dovetail_2963:HG4_Ill_scalpel_4659:HG4_Ill_MetaSV_3870:HG4_Ill_GATKHCSBGrefine_3406:HG4_10X_allpass_923:HG3_PB_SVrefine2PBcRDovetail_2190:HG3_PB_SVrefine2Falcon1Dovetail_2991:HG3_Ill_SVrefine2DISCOVARDovetail_3741:HG3_Ill_GATKHCSBGrefine_3239:HG3_10X_allpass_958:HG2_PB_pbsv_4826:HG2_PB_SVrefine2Falcon2Bionano_2327:HG2_PB_SVrefine2Falcon1plusDovetail_8939:HG2_Ill_scalpel_4754:HG2_Ill_SVrefine2DISCOVARplusDovetail_9718:HG2_Ill_GATKHCSBGrefine_3264:HG2_10X_allpass_785:HG2_Ill_breakscan11_673;NumClusterSVs=33;ExactMatchIDs=HG2_10X_allpass_785:HG2_Ill_GATKHCSBGrefine_3264:HG2_Ill_SVrefine2DISCOVARplusDovetail_9718:HG2_Ill_scalpel_4754:HG2_PB_SVrefine2Falcon1plusDovetail_8939:HG2_PB_SVrefine2Falcon2Bionano_2327:HG2_PB_pbsv_4826:HG3_10X_allpass_958:HG3_Ill_GATKHCSBGrefine_3239:HG3_Ill_SVrefine2DISCOVARDovetail_3741:HG3_PB_SVrefine2Falcon1Dovetail_2991:HG3_PB_SVrefine2PBcRDovetail_2190:HG4_10X_allpass_923:HG4_Ill_GATKHCSBGrefine_3406:HG4_Ill_MetaSV_3870:HG4_Ill_scalpel_4659:HG4_PB_SVrefine2Falcon1Dovetail_2963:HG4_PB_pbsv_4861;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0846906;ClusterMaxSizeDiff=0.0846906;ClusterMaxEditDist=0.0947712;PBcalls=13;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=33074;DistForward=-286;DistMin=-286;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=4:117251479-117251806;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2900.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:38:0|1:35:0:3:38:./.:0:0:0:0:0/1:23:22:0/1:28:7:.:.:.
chr4	117420629	HG2_PB_SVrefine2PB10Xhap12_3517	TAAAAAAATAAAACTAAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_3742:HG3_Ill_Krunchall_6764:HG2_PB_pbsv_4827:HG2_Ill_Krunchall_6888:HG2_PB_assemblyticsfalcon_19960:HG2_PB_assemblyticsPBcR_19312:HG4_PB_assemblyticsfalcon_19510:HG4_PB_SVrefine2Falcon1Dovetail_2964:HG3_Ill_Spiral_5293:HG3_PB_SVrefine2PBcRDovetail_2191:HG3_PB_SVrefine2Falcon1Dovetail_2992:HG3_Ill_scalpel_4834:HG3_Ill_MetaSV_3862:HG3_Ill_GATKHCSBGrefine_3240:HG3_10X_allpass_959:HG2_PB_SVrefine2PBcRplusDovetail_8315:HG2_PB_SVrefine2PB10Xhap12_3517:HG2_PB_SVrefine2Falcon1plusDovetail_8940:HG2_PB_HySA_9060:HG2_Ill_manta_1364:HG2_Ill_MetaSV_3693:HG2_Ill_GATKHCSBGrefine_3265:HG3_PB_pbsv_4712:HG2_Ill_breakscan11_674:HG2_Ill_Spiral_348:HG3_PB_HySA_7424;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3265:HG2_Ill_MetaSV_3693:HG2_Ill_manta_1364:HG2_PB_HySA_9060:HG2_PB_SVrefine2Falcon1plusDovetail_8940:HG2_PB_SVrefine2PB10Xhap12_3517:HG2_PB_SVrefine2PBcRplusDovetail_8315:HG3_10X_allpass_959:HG3_Ill_GATKHCSBGrefine_3240:HG3_Ill_MetaSV_3862:HG3_Ill_scalpel_4834:HG3_PB_SVrefine2Falcon1Dovetail_2992:HG3_PB_SVrefine2PBcRDovetail_2191;NumExactMatchSVs=13;ClusterMaxShiftDist=0.17316;ClusterMaxSizeDiff=0.171831;ClusterMaxEditDist=0.25974;PBcalls=13;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-279;DistBack=43954;DistForward=-274;DistMin=-274;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:117420630-117420924;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2901.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:31:0|1:26:1:4:26:./.:0:0:0:0:0/1:16:5:./.:.:.:.:.:.
chr4	117700193	HG2_10X_allpass_786	CATTTAAAGTTAATAGTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCTATGGTCTTTACATTTTGGCATGATTTTGCAGCAGCTGGTACTGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAACTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGGATTTTATTTCTCCTTCACTTATGAAGCTTAAATTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCTGAGAGATCTGCTGTTAGTCTGATGGGCTTCCCTTTGAGGGTAACCTGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACGTTGGTGGATCTGACAATTACGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGGACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCCCATCACTTTCAGGTACACCAATCAGACATAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCTTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCACATGGGCTCCTGAGGCTTCTGCATTCTTCACATAGTTCTCGAGCTTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_4828:HG4_10X_allpass_924:HG2_PB_assemblyticsfalcon_19963:HG2_PB_assemblyticsPBcR_19314:HG4_PB_pbsv_4862:HG4_Ill_Krunchall_7170:HG2_Ill_Krunchall_6890:HG3_Ill_MetaSV_3863:HG2_Ill_tnscope_542:HG4_Ill_MetaSV_3871:HG3_PB_SVrefine2PBcRDovetail_2192:HG3_10X_allpass_960:HG2_PB_SVrefine2PBcRplusDovetail_8316:HG2_PB_SVrefine2PB10Xhap12_3518:HG2_PB_SVrefine2Falcon2Bionano_2328:HG2_PB_SVrefine2Falcon1plusDovetail_8941:HG2_Ill_SVrefine2DISCOVARplusDovetail_9721:HG2_Ill_MetaSV_3694:HG2_10X_allpass_786:HG3_PB_pbsv_4714;NumClusterSVs=20;ExactMatchIDs=HG2_10X_allpass_786:HG2_Ill_MetaSV_3694:HG2_Ill_SVrefine2DISCOVARplusDovetail_9721:HG2_PB_SVrefine2Falcon1plusDovetail_8941:HG2_PB_SVrefine2Falcon2Bionano_2328:HG2_PB_SVrefine2PB10Xhap12_3518:HG2_PB_SVrefine2PBcRplusDovetail_8316:HG3_10X_allpass_960:HG3_PB_SVrefine2PBcRDovetail_2192:HG4_Ill_MetaSV_3871;NumExactMatchSVs=10;ClusterMaxShiftDist=0.160204;ClusterMaxSizeDiff=0.160204;ClusterMaxEditDist=0.160204;PBcalls=10;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-905;DistBack=-105;DistForward=-902;DistMin=-902;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=4:117700194-117701102;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2902.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:2:19:1:27:./.:0:0:0:0:1/1:0:40:1/1:2:50:.:.:.
chr4	120017235	HG4_Ill_GATKHCSBGrefine_3414	TAAAAGATGCTGCAATGAGGCCGGGCGCGGTGGCTCACGCCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTCGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_675:HG3_10X_allpass_963:HG4_PB_assemblyticsfalcon_19522:HG2_PB_assemblyticsfalcon_19978:HG4_Ill_Krunchall_7191:HG3_Ill_Krunchall_6789:HG2_Ill_Krunchall_6911:HG2_PB_pbsv_4834:HG3_PB_pbsv_4721:HG4_Ill_MetaSV_3875:HG3_Ill_MetaSV_3867:HG2_Ill_tnscope_543:HG2_Ill_MetaSV_3698:HG4_PB_SVrefine2PBcRDovetail_2462:HG4_PB_SVrefine2Falcon1Dovetail_2968:HG4_Ill_scalpel_4675:HG4_Ill_manta_1215:HG4_Ill_SVrefine2DISCOVARDovetail_3714:HG4_Ill_GATKHCSBGrefine_3414:HG4_10X_allpass_926:HG3_PB_assemblyticsfalcon_19901:HG3_PB_SVrefine2PBcRDovetail_2199:HG3_PB_SVrefine2Falcon1Dovetail_2996:HG3_PB_HySA_7445:HG3_Ill_scalpel_4850:HG3_Ill_manta_1121:HG3_Ill_SVrefine2DISCOVARDovetail_3749:HG3_Ill_GATKHCSBGrefine_3254:HG2_PB_assemblyticsPBcR_19327:HG2_PB_SVrefine2PBcRplusDovetail_8321:HG2_PB_SVrefine2PB10Xhap12_3524:HG2_PB_SVrefine2Falcon2Bionano_2331:HG2_PB_SVrefine2Falcon1plusDovetail_8948:HG2_Ill_scalpel_4767:HG2_Ill_manta_1366:HG2_Ill_SVrefine2DISCOVARplusDovetail_9729:HG2_Ill_GATKHCSBGrefine_3272:HG2_10X_allpass_787:HG2_10X_SVrefine210Xhap12_3540:HG4_PB_pbsv_4867:HG4_PB_HySA_7234;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3540:HG2_10X_allpass_787:HG2_Ill_GATKHCSBGrefine_3272:HG2_Ill_SVrefine2DISCOVARplusDovetail_9729:HG2_Ill_manta_1366:HG2_Ill_scalpel_4767:HG2_PB_SVrefine2Falcon1plusDovetail_8948:HG2_PB_SVrefine2Falcon2Bionano_2331:HG2_PB_SVrefine2PB10Xhap12_3524:HG2_PB_SVrefine2PBcRplusDovetail_8321:HG2_PB_assemblyticsPBcR_19327:HG3_Ill_GATKHCSBGrefine_3254:HG3_Ill_SVrefine2DISCOVARDovetail_3749:HG3_Ill_manta_1121:HG3_Ill_scalpel_4850:HG3_PB_HySA_7445:HG3_PB_SVrefine2Falcon1Dovetail_2996:HG3_PB_SVrefine2PBcRDovetail_2199:HG3_PB_assemblyticsfalcon_19901:HG4_10X_allpass_926:HG4_Ill_GATKHCSBGrefine_3414:HG4_Ill_SVrefine2DISCOVARDovetail_3714:HG4_Ill_manta_1215:HG4_Ill_scalpel_4675:HG4_PB_SVrefine2Falcon1Dovetail_2968:HG4_PB_SVrefine2PBcRDovetail_2462;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0641026;ClusterMaxSizeDiff=0.0641026;ClusterMaxEditDist=0.0641026;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=15318;DistForward=815;DistMin=815;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=4:120017236-120017572;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2903.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:1/1:0:12:0:17:./.:0:0:0:0:1/1:0:47:0/1:1:8:.:.:.
chr4	120169398	HG2_PB_SVrefine2PB10Xhap12_3525	AGAAATACAGGTTGGGTATCTCTTGTCTGAAATGCTCAGGACCAGCAGTGTCCTCTGAGGGTGGGACCTGGGAACCCTATATGTTTAATTCTTGTGTCTGCTAACATTTGATTTAGAGGCTGGTGCAAACATTTCTACACTTGATGATACAAATAATTAATTTTTGTATGAAATTTTAGAGCAAAAGACTTCTGTATTATTTTCC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3525:HG4_PB_pbsv_4869:HG2_PB_HySA_9083:HG2_PB_PB10Xdip_21308:HG2_PB_pbsv_4835:HG4_10X_allpass_927;NumClusterSVs=6;ExactMatchIDs=HG2_PB_PB10Xdip_21308:HG2_PB_SVrefine2PB10Xhap12_3525:HG4_10X_allpass_927;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00980392;ClusterMaxSizeDiff=0.00980392;ClusterMaxEditDist=0.019656;PBcalls=5;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-204;DistBack=20986;DistForward=-164;DistMin=-164;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=204;REFWIDENED=4:120169399-120169806;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2904.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:36:1|0:2:28:25:3:./.:0:0:0:0:0/1:23:17:./.:.:.:.:.:.
chr4	121087087	HG3_Ill_GATKHCSBGrefine_3257	CAGCAGAGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAATCTGTAGGATAATATCATCAGTGAATTTACATTTAAAAATGCTAAATAAATATGTATGTATTTCAGATTTCAGAAATATATTAAAAATCATGGAGTATGATTAAAAAAAAAAAAAAAAGAAAT	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_676:HG2_PB_assemblyticsPBcR_19338:HG4_Ill_Krunchall_7203:HG3_Ill_Krunchall_6796:HG2_Ill_Krunchall_6924:HG4_PB_assemblyticsfalcon_19529:HG3_PB_assemblyticsfalcon_19909:HG2_PB_assemblyticsfalcon_19987:HG4_PB_pbsv_4873:HG3_PB_pbsv_4725:HG4_Ill_MetaSV_3879:HG3_Ill_MetaSV_3869:HG2_Ill_MetaSV_3700:HG4_PB_SVrefine2PBcRDovetail_2465:HG4_PB_SVrefine2Falcon1Dovetail_2971:HG4_Ill_svaba_6342:HG4_Ill_scalpel_4683:HG4_Ill_manta_1217:HG4_Ill_SVrefine2DISCOVARDovetail_3716:HG4_Ill_GATKHCSBGrefine_3419:HG4_10X_allpass_928:HG3_PB_SVrefine2PBcRDovetail_2202:HG3_PB_SVrefine2Falcon1Dovetail_3000:HG3_Ill_svaba_6334:HG3_Ill_scalpel_4855:HG3_Ill_manta_1123:HG3_Ill_SVrefine2DISCOVARDovetail_3753:HG3_Ill_GATKHCSBGrefine_3257:HG3_10X_allpass_965:HG2_PB_pbsv_4840:HG2_PB_SVrefine2PBcRplusDovetail_8324:HG2_PB_SVrefine2PB10Xhap12_3528:HG2_PB_SVrefine2Falcon2Bionano_2335:HG2_PB_SVrefine2Falcon1plusDovetail_8952:HG2_Ill_svaba_6218:HG2_Ill_scalpel_4777:HG2_Ill_manta_1368:HG2_Ill_SpiralSDKrefine_12637:HG2_Ill_SVrefine2DISCOVARplusDovetail_9731:HG2_Ill_GATKHCSBGrefine_3275:HG2_10X_allpass_788:HG2_10X_SVrefine210Xhap12_3542;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3542:HG2_10X_allpass_788:HG2_Ill_GATKHCSBGrefine_3275:HG2_Ill_SVrefine2DISCOVARplusDovetail_9731:HG2_Ill_SpiralSDKrefine_12637:HG2_Ill_manta_1368:HG2_Ill_scalpel_4777:HG2_Ill_svaba_6218:HG2_PB_SVrefine2Falcon1plusDovetail_8952:HG2_PB_SVrefine2Falcon2Bionano_2335:HG2_PB_SVrefine2PB10Xhap12_3528:HG2_PB_SVrefine2PBcRplusDovetail_8324:HG2_PB_pbsv_4840:HG3_10X_allpass_965:HG3_Ill_GATKHCSBGrefine_3257:HG3_Ill_SVrefine2DISCOVARDovetail_3753:HG3_Ill_manta_1123:HG3_Ill_scalpel_4855:HG3_Ill_svaba_6334:HG3_PB_SVrefine2Falcon1Dovetail_3000:HG3_PB_SVrefine2PBcRDovetail_2202:HG4_10X_allpass_928:HG4_Ill_GATKHCSBGrefine_3419:HG4_Ill_SVrefine2DISCOVARDovetail_3716:HG4_Ill_manta_1217:HG4_Ill_scalpel_4683:HG4_Ill_svaba_6342:HG4_PB_SVrefine2Falcon1Dovetail_2971:HG4_PB_SVrefine2PBcRDovetail_2465;NumExactMatchSVs=29;ClusterMaxShiftDist=0.125313;ClusterMaxSizeDiff=0.125313;ClusterMaxEditDist=0.125313;PBcalls=15;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-205;DistBack=35656;DistForward=50144;DistMin=35656;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:121087088-121087305;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2905.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:89:1/1:2:41:0:35:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr4	121808929	HG3_PB_SVrefine2Falcon1Dovetail_3002	AGACATTTTATCCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_677:HG2_PB_HySA_9101:HG4_Ill_Krunchall_7206:HG3_Ill_Krunchall_6800:HG2_Ill_Krunchall_6931:HG4_PB_assemblyticsfalcon_19532:HG2_PB_assemblyticsfalcon_19993:HG2_PB_assemblyticsPBcR_19343:HG4_PB_pbsv_4876:HG3_PB_pbsv_4728:HG4_Ill_MetaSV_3880:HG3_Ill_MetaSV_3871:HG2_Ill_tnscope_544:HG2_Ill_MetaSV_3701:HG3_PB_assemblyticsfalcon_19913:HG4_PB_SVrefine2PBcRDovetail_2467:HG4_PB_SVrefine2Falcon1Dovetail_2974:HG4_Ill_scalpel_4686:HG4_Ill_manta_1218:HG4_Ill_SVrefine2DISCOVARDovetail_3720:HG4_Ill_GATKHCSBGrefine_3420:HG4_10X_allpass_929:HG3_PB_SVrefine2Falcon1Dovetail_3002:HG3_Ill_scalpel_4859:HG3_Ill_GATKHCSBGrefine_3261:HG3_10X_allpass_967:HG2_PB_pbsv_4844:HG2_PB_SVrefine2PBcRplusDovetail_8326:HG2_PB_SVrefine2PB10Xhap12_3530:HG2_PB_SVrefine2Falcon2Bionano_2338:HG2_PB_SVrefine2Falcon1plusDovetail_8955:HG2_Ill_scalpel_4780:HG2_Ill_manta_1369:HG2_Ill_SVrefine2DISCOVARplusDovetail_9734:HG2_Ill_GATKHCSBGrefine_3278:HG2_10X_allpass_789:HG2_10X_SVrefine210Xhap12_3544;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3544:HG2_10X_allpass_789:HG2_Ill_GATKHCSBGrefine_3278:HG2_Ill_SVrefine2DISCOVARplusDovetail_9734:HG2_Ill_manta_1369:HG2_Ill_scalpel_4780:HG2_PB_SVrefine2Falcon1plusDovetail_8955:HG2_PB_SVrefine2Falcon2Bionano_2338:HG2_PB_SVrefine2PB10Xhap12_3530:HG2_PB_SVrefine2PBcRplusDovetail_8326:HG2_PB_pbsv_4844:HG3_10X_allpass_967:HG3_Ill_GATKHCSBGrefine_3261:HG3_Ill_scalpel_4859:HG3_PB_SVrefine2Falcon1Dovetail_3002:HG4_10X_allpass_929:HG4_Ill_GATKHCSBGrefine_3420:HG4_Ill_SVrefine2DISCOVARDovetail_3720:HG4_Ill_manta_1218:HG4_Ill_scalpel_4686:HG4_PB_SVrefine2Falcon1Dovetail_2974:HG4_PB_SVrefine2PBcRDovetail_2467;NumExactMatchSVs=22;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.08;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=19297;DistForward=16097;DistMin=16097;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:121808930-121809259;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2906.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:63:./.:7:16:2:20:./.:0:0:0:0:1/1:0:42:./.:1:17:.:.:.
chr4	122232649	HG2_Ill_svaba_6223	TGAAATCGGAGGTGGAGGTTGCAGTGAGCTGAGATTGCCCTACTGCACTCCGGCCCAGGCAGCAGACTGAGATTCATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAGTCATG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_349:HG2_Ill_breakscan11_678:HG2_PB_assemblyticsfalcon_19996:HG2_PB_assemblyticsPBcR_19346:HG4_Ill_Krunchall_7212:HG2_Ill_Krunchall_6937:HG2_PB_HySA_9104:HG4_PB_pbsv_4878:HG4_Ill_svaba_6346:HG4_Ill_scalpel_4689:HG4_Ill_SVrefine2DISCOVARDovetail_3724:HG4_Ill_GATKHC_8182:HG4_Ill_GATKHCSBGrefine_3422:HG4_10X_allpass_930:HG2_PB_pbsv_4846:HG2_PB_SVrefine2PBcRplusDovetail_8328:HG2_PB_SVrefine2PB10Xhap12_3532:HG2_PB_SVrefine2Falcon2Bionano_2339:HG2_PB_SVrefine2Falcon1plusDovetail_8957:HG2_Ill_svaba_6223:HG2_Ill_scalpel_4783:HG2_Ill_SpiralSDKrefine_12647:HG2_Ill_SVrefine2DISCOVARplusDovetail_9736:HG2_Ill_GATKHC_8124:HG2_Ill_GATKHCSBGrefine_3280:HG2_10X_allpass_790:HG2_10X_SVrefine210Xhap12_3546:HG4_Ill_Spiral_403;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3546:HG2_10X_allpass_790:HG2_Ill_GATKHCSBGrefine_3280:HG2_Ill_GATKHC_8124:HG2_Ill_SVrefine2DISCOVARplusDovetail_9736:HG2_Ill_SpiralSDKrefine_12647:HG2_Ill_scalpel_4783:HG2_Ill_svaba_6223:HG2_PB_SVrefine2Falcon1plusDovetail_8957:HG2_PB_SVrefine2Falcon2Bionano_2339:HG2_PB_SVrefine2PB10Xhap12_3532:HG2_PB_SVrefine2PBcRplusDovetail_8328:HG2_PB_pbsv_4846:HG4_10X_allpass_930:HG4_Ill_GATKHCSBGrefine_3422:HG4_Ill_GATKHC_8182:HG4_Ill_SVrefine2DISCOVARDovetail_3724:HG4_Ill_scalpel_4689:HG4_Ill_svaba_6346:HG4_PB_pbsv_4878;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0598291;ClusterMaxSizeDiff=0.0598291;ClusterMaxEditDist=0.0600858;PBcalls=9;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-117;DistBack=15994;DistForward=-32;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=4:122232650-122232770;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2907.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:35:0|1:31:2:5:26:./.:0:0:0:0:0/1:26:12:./.:.:.:.:.:.
chr4	122448205	HG2_PB_SVrefine2PB10Xhap12_3533	CGCCACCATGTCCGGCTAATTTTTTGTATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCG	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3872:HG2_PB_SVrefine2Falcon1plusDovetail_8958:HG4_PB_SVrefine2PBcRDovetail_2469:HG3_PB_SVrefine2PBcRDovetail_2206:HG3_Ill_SVrefine2DISCOVARDovetail_3759:HG2_PB_SVrefine2PBcRplusDovetail_8329:HG2_PB_SVrefine2PB10Xhap12_3533:HG2_PB_SVrefine2Falcon2Bionano_2340:HG2_10X_SVrefine210Xhap12_3547:HG2_PB_pbsv_4849:HG4_PB_pbsv_4881:HG4_Ill_GATKHC_8184:HG4_Ill_GATKHCSBGrefine_3423:HG3_Ill_GATKHC_8118:HG3_Ill_GATKHCSBGrefine_3264:HG2_Ill_GATKHC_8128:HG2_Ill_GATKHCSBGrefine_3281:HG4_PB_HySA_7251:HG4_PB_SVrefine2Falcon1Dovetail_2975:HG3_PB_SVrefine2Falcon1Dovetail_3003:HG4_PB_assemblyticsfalcon_19537:HG3_PB_assemblyticsfalcon_19919:HG2_PB_assemblyticsfalcon_20001:HG2_PB_assemblyticsPBcR_19350:HG3_PB_pbsv_4732:HG4_10X_allpass_931:HG3_PB_HySA_7458:HG2_10X_allpass_791:HG2_PB_HySA_9108:HG4_Ill_MetaSV_3881;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3547:HG2_PB_SVrefine2Falcon2Bionano_2340:HG2_PB_SVrefine2PB10Xhap12_3533:HG2_PB_SVrefine2PBcRplusDovetail_8329:HG3_Ill_SVrefine2DISCOVARDovetail_3759:HG3_PB_SVrefine2PBcRDovetail_2206:HG4_PB_SVrefine2PBcRDovetail_2469;NumExactMatchSVs=7;ClusterMaxShiftDist=0.144444;ClusterMaxSizeDiff=0.144444;ClusterMaxEditDist=0.144444;PBcalls=18;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-180;DistBack=14485;DistForward=-154;DistMin=-154;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=185;REFWIDENED=4:122448053-122448417;PctSeqSimilarity=0.9776;PctSizeSimilarity=0.9783;PctRecOverlap=0.1514;SizeDiff=-4;StartDistance=157;EndDistance=153;GTMatch=0;TruScore=70;MatchId=2908.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:1/1:1:9:0:9:./.:0:0:0:0:0/1:3:17:./.:.:.:.:.:.
chr4	125671738	HG2_Ill_SVrefine2DISCOVARplusDovetail_9744	TAAAAGTTGGTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3562:HG4_Ill_Krunchall_7233:HG2_PB_assemblyticsPBcR_19375:HG4_PB_pbsv_4891:HG2_PB_pbsv_4857:HG4_Ill_MetaSV_3886:HG2_Ill_tnscope_546:HG4_PB_SVrefine2PBcRDovetail_2477:HG4_Ill_manta_1221:HG4_Ill_GATKHCSBGrefine_3428:HG4_10X_allpass_933:HG2_PB_assemblyticsfalcon_20025:HG2_PB_SVrefine2PBcRplusDovetail_8338:HG2_PB_SVrefine2PB10Xhap12_3541:HG2_PB_SVrefine2Falcon1plusDovetail_8966:HG2_Ill_breakscan11_680:HG2_Ill_SVrefine2DISCOVARplusDovetail_9744:HG2_Ill_MetaSV_3705:HG2_Ill_GATKHCSBGrefine_3288:HG2_10X_allpass_793;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3562:HG4_PB_SVrefine2PBcRDovetail_2477:HG4_Ill_manta_1221:HG4_Ill_GATKHCSBGrefine_3428:HG4_10X_allpass_933:HG2_PB_assemblyticsfalcon_20025:HG2_PB_SVrefine2PBcRplusDovetail_8338:HG2_PB_SVrefine2PB10Xhap12_3541:HG2_PB_SVrefine2Falcon1plusDovetail_8966:HG2_Ill_breakscan11_680:HG2_Ill_SVrefine2DISCOVARplusDovetail_9744:HG2_Ill_MetaSV_3705:HG2_Ill_GATKHCSBGrefine_3288:HG2_10X_allpass_793;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0859873;ClusterMaxSizeDiff=0.0859873;ClusterMaxEditDist=0.0859873;PBcalls=8;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=91480;DistForward=-319;DistMin=-319;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:125671739-125672071;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2910.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:18:0|1:34:1:0:16:./.:0:0:0:0:0/1:29:16:0/1:27:6:.:.:.
chr4	125768460	HG2_PB_SVrefine2PB10Xhap12_3542	GAAGGAGGACTTATAAACTTTCATAGTTCACAGTTGTAGAAATGGAAAACACACATTCCCCAAAAGCTGTGATAGCAGAGTATCCCCTCTCCCTAGCACTTAGATTCTGGGTCCAAGTATTCTATCCCTTAAAGATATAGCACCATATAAAATCCATTGATTTAGAATGCCCTGCATCCTGGAACATGGCACCCCATACTCCCAAGTTACTGTGTCTAAGCTGGTGCTCCAACT	G	20	PASS	ClusterIDs=HG2_10X_allpass_794:HG3_PB_pbsv_4738:HG2_PB_pbsv_4858:HG2_PB_SVrefine2PBcRplusDovetail_8339:HG2_PB_SVrefine2PB10Xhap12_3542:HG2_PB_SVrefine2Falcon2Bionano_2344:HG2_PB_SVrefine2Falcon1plusDovetail_8967;NumClusterSVs=7;ExactMatchIDs=HG2_10X_allpass_794:HG2_PB_SVrefine2PBcRplusDovetail_8339:HG2_PB_SVrefine2PB10Xhap12_3542:HG2_PB_SVrefine2Falcon2Bionano_2344:HG2_PB_SVrefine2Falcon1plusDovetail_8967;NumExactMatchSVs=5;ClusterMaxShiftDist=0.012959;ClusterMaxSizeDiff=0.0129032;ClusterMaxEditDist=0.0215983;PBcalls=6;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-233;DistBack=23782;DistForward=-233;DistMin=-233;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=234;REFWIDENED=4:125768461-125768927;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2911.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:24:0|1:37:0:3:20:./.:0:0:0:0:0/1:19:5:./.:.:.:.:.:.
chr4	125867361	HG4_Ill_SVrefine2DISCOVARDovetail_3733	TAAGAGATTTTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_404:HG3_10X_allpass_969:HG2_PB_HySA_9139:HG4_PB_pbsv_4892:HG3_PB_pbsv_4739:HG2_PB_pbsv_4859:HG2_PB_assemblyticsfalcon_20030:HG2_PB_assemblyticsPBcR_19380:HG4_Ill_Krunchall_7235:HG3_Ill_Krunchall_6838:HG2_Ill_Krunchall_6964:HG4_Ill_MetaSV_3887:HG3_Ill_MetaSV_3876:HG2_Ill_tnscope_547:HG2_Ill_MetaSV_3706:HG4_PB_assemblyticsfalcon_19561:HG4_PB_SVrefine2PBcRDovetail_2478:HG4_PB_SVrefine2Falcon1Dovetail_2983:HG4_Ill_scalpel_4705:HG4_Ill_manta_1222:HG4_Ill_SVrefine2DISCOVARDovetail_3733:HG4_Ill_GATKHCSBGrefine_3429:HG4_10X_allpass_934:HG3_PB_SVrefine2PBcRDovetail_2213:HG3_PB_SVrefine2Falcon1Dovetail_3010:HG3_Ill_SVrefine2DISCOVARDovetail_3766:HG3_Ill_GATKHCSBGrefine_3272:HG2_PB_SVrefine2PBcRplusDovetail_8340:HG2_PB_SVrefine2PB10Xhap12_3544:HG2_PB_SVrefine2Falcon2Bionano_2345:HG2_PB_SVrefine2Falcon1plusDovetail_8968:HG2_Ill_scalpel_4800:HG2_Ill_manta_1371:HG2_Ill_SVrefine2DISCOVARplusDovetail_9747:HG2_Ill_GATKHCSBGrefine_3289:HG2_10X_allpass_795:HG2_10X_SVrefine210Xhap12_3563;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3563:HG2_10X_allpass_795:HG2_Ill_GATKHCSBGrefine_3289:HG2_Ill_SVrefine2DISCOVARplusDovetail_9747:HG2_Ill_manta_1371:HG2_Ill_scalpel_4800:HG2_PB_SVrefine2Falcon1plusDovetail_8968:HG2_PB_SVrefine2Falcon2Bionano_2345:HG2_PB_SVrefine2PB10Xhap12_3544:HG2_PB_SVrefine2PBcRplusDovetail_8340:HG3_Ill_GATKHCSBGrefine_3272:HG3_Ill_SVrefine2DISCOVARDovetail_3766:HG3_PB_SVrefine2Falcon1Dovetail_3010:HG3_PB_SVrefine2PBcRDovetail_2213:HG4_10X_allpass_934:HG4_Ill_GATKHCSBGrefine_3429:HG4_Ill_SVrefine2DISCOVARDovetail_3733:HG4_Ill_manta_1222:HG4_Ill_scalpel_4705:HG4_PB_SVrefine2Falcon1Dovetail_2983:HG4_PB_SVrefine2PBcRDovetail_2478:HG4_PB_assemblyticsfalcon_19561;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0708783;ClusterMaxSizeDiff=0.0708783;ClusterMaxEditDist=0.0708783;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=2375;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=4:125867362-125867702;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2912.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:68:1/1:3:23:1:13:./.:0:0:0:0:1/1:0:45:./.:2:15:.:.:.
chr4	128379091	HG3_Ill_manta_1128	GCCATCATTCACAGTACCTAATGTAGTGTTCTAGATACAAAAATTAAGTAAAGATGGTCTCTGGCCTCAAGGAATTCAGACTCTAGGGGAGACCAACATGTAAACAATTAAGTAAAAA	TTTC	20	PASS	ClusterIDs=HG3_PB_pbsv_4744:HG3_Ill_GATKHC_8176:HG3_Ill_GATKHCSBGrefine_3281:HG2_Ill_GATKHC_8183:HG2_Ill_GATKHCSBGrefine_3298:HG3_PB_SVrefine2Falcon1Dovetail_3012:HG3_Ill_manta_1128:HG3_Ill_SVrefine2DISCOVARDovetail_3774:HG3_Ill_Cortex_2747:HG2_Ill_manta_1372:HG2_Ill_SVrefine2DISCOVARplusDovetail_9755:HG2_Ill_Cortex_6510:HG2_10X_SVrefine210Xhap12_3569:HG2_Ill_SpiralSDKrefine_12678:HG3_Ill_Spiral_5372:HG2_Ill_Spiral_350:HG3_PB_assemblyticsfalcon_19952:HG2_PB_pbsv_4867:HG3_10X_allpass_971:HG3_Ill_Krunchall_6865;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3569:HG2_Ill_Cortex_6510:HG2_Ill_SVrefine2DISCOVARplusDovetail_9755:HG2_Ill_manta_1372:HG3_Ill_Cortex_2747:HG3_Ill_SVrefine2DISCOVARDovetail_3774:HG3_Ill_manta_1128:HG3_PB_SVrefine2Falcon1Dovetail_3012;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0877193;ClusterMaxSizeDiff=0.0877193;ClusterMaxEditDist=0.0877193;PBcalls=4;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-114;DistBack=-72;DistForward=-42;DistMin=-72;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:128379091-128379208;PctSeqSimilarity=0.9957;PctSizeSimilarity=0.9828;PctRecOverlap=0.9915;SizeDiff=-2;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2913.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:17:0|1:18:2:1:15:./.:0:0:0:0:0/1:41:26:./.:.:.:.:.:.
chr4	130407575	HG3_Ill_250bpfermikitraw_6619	TTTACTACACTTCTCACAGTTTTTATGAGGACTAAAAGTTTTCATATATGTAAAATACATAGACGAGTGTCTGGCACACATTAAGTATTAGTACTCA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_4872:HG4_Ill_svaba_6394:HG4_Ill_scalpel_4727:HG4_Ill_GATKHC_8242:HG4_Ill_GATKHCSBGrefine_3441:HG4_Ill_250bpfermikitraw_6888:HG4_Ill_150bpfermikitraw_6589:HG4_CG_vcfBeta_3265:HG3_Ill_svaba_6392:HG3_Ill_scalpel_4909:HG3_Ill_GATKHC_8183:HG3_Ill_GATKHCSBGrefine_3285:HG3_Ill_250bpfermikitraw_6619:HG3_Ill_150bpfermikitraw_6446:HG3_CG_vcfBeta_2800:HG2_Ill_svaba_6274:HG2_Ill_scalpel_4832:HG2_Ill_GATKHC_8193:HG2_Ill_GATKHCSBGrefine_3303:HG2_Ill_250bpfermikitraw_6845:HG2_Ill_150bpfermikitraw_6378:HG2_CG_vcfBeta_2901:HG4_PB_assemblyticsfalcon_19584:HG4_PB_SVrefine2PBcRDovetail_2483:HG4_PB_SVrefine2Falcon1Dovetail_2988:HG4_Ill_manta_1224:HG4_Ill_SVrefine2DISCOVARDovetail_3745:HG3_PB_assemblyticsfalcon_19962:HG3_PB_SVrefine2PBcRDovetail_2216:HG3_PB_SVrefine2Falcon1Dovetail_3017:HG3_Ill_manta_1131:HG3_Ill_SVrefine2DISCOVARDovetail_3785:HG2_PB_assemblyticsfalcon_20052:HG2_PB_assemblyticsPBcR_19404:HG2_PB_SVrefine2PBcRplusDovetail_8345:HG2_PB_SVrefine2PB10Xhap12_3554:HG2_PB_SVrefine2Falcon2Bionano_2347:HG2_PB_SVrefine2Falcon1plusDovetail_8975:HG2_PB_PB10Xdip_21383:HG2_Ill_manta_1374:HG2_Ill_SpiralSDKrefine_12685:HG2_Ill_SVrefine2DISCOVARplusDovetail_9760:HG2_10X_SVrefine210Xhap12_3576:HG2_PB_HySA_9172:HG4_Ill_MetaSV_3891:HG4_10X_allpass_936:HG3_Ill_MetaSV_3878:HG3_10X_allpass_973:HG2_Ill_MetaSV_3710:HG4_PB_HySA_7305:HG4_Ill_Krunchall_7275:HG3_PB_pbsv_4746:HG3_Ill_Krunchall_6873:HG2_Ill_Krunchall_7004:HG4_PB_pbsv_4907;NumClusterSVs=55;ExactMatchIDs=HG2_CG_vcfBeta_2901:HG2_Ill_150bpfermikitraw_6378:HG2_Ill_250bpfermikitraw_6845:HG2_Ill_GATKHCSBGrefine_3303:HG2_Ill_GATKHC_8193:HG2_Ill_scalpel_4832:HG2_Ill_svaba_6274:HG3_CG_vcfBeta_2800:HG3_Ill_150bpfermikitraw_6446:HG3_Ill_250bpfermikitraw_6619:HG3_Ill_GATKHCSBGrefine_3285:HG3_Ill_GATKHC_8183:HG3_Ill_scalpel_4909:HG3_Ill_svaba_6392:HG4_CG_vcfBeta_3265:HG4_Ill_150bpfermikitraw_6589:HG4_Ill_250bpfermikitraw_6888:HG4_Ill_GATKHCSBGrefine_3441:HG4_Ill_GATKHC_8242:HG4_Ill_scalpel_4727:HG4_Ill_svaba_6394;NumExactMatchSVs=21;ClusterMaxShiftDist=0.211982;ClusterMaxSizeDiff=0.211982;ClusterMaxEditDist=0.211982;PBcalls=18;Illcalls=31;TenXcalls=3;CGcalls=3;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=3;HG2count=22;HG3count=16;HG4count=17;NumTechs=4;NumTechsExact=2;SVLEN=-96;DistBack=129485;DistForward=17840;DistMin=17840;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:130407576-130407671;PctSeqSimilarity=0.9065;PctSizeSimilarity=0.8276;PctRecOverlap=0.8291;SizeDiff=-20;StartDistance=20;EndDistance=0;GTMatch=0;TruScore=85;MatchId=2914.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:1/1:0:32:1:33:./.:0:0:0:0:0/1:3:20:./.:.:.:.:.:.
chr4	130495568	HG3_PB_assemblyticsfalcon_19963	TTATATATATATATGTATATATATATATATATATATGTATATATATATATATATATATGTATATATA	T	20	PASS	ClusterIDs=HG4_PB_HySA_7306:HG3_PB_HySA_7507:HG2_PB_assemblyticsfalcon_20053:HG2_PB_assemblyticsPBcR_19405:HG4_Ill_Krunchall_7276:HG2_Ill_Krunchall_7005:HG3_PB_pbsv_4747:HG4_PB_pbsv_4908:HG2_PB_pbsv_4873:HG4_PB_assemblyticsfalcon_19585:HG4_Ill_svaba_6396:HG4_Ill_scalpel_4728:HG4_Ill_manta_1225:HG4_Ill_GATKHC_8243:HG4_Ill_GATKHCSBGrefine_3442:HG4_Ill_250bpfermikitraw_6889:HG4_Ill_150bpfermikitraw_6590:HG4_10X_allpass_937:HG3_PB_assemblyticsfalcon_19963:HG3_Ill_svaba_6395:HG3_Ill_scalpel_4911:HG3_Ill_manta_1132:HG3_Ill_Krunchall_6875:HG3_Ill_GATKHC_8184:HG3_Ill_GATKHCSBGrefine_3286:HG3_Ill_250bpfermikitraw_6620:HG3_Ill_150bpfermikitraw_6447:HG3_10X_allpass_974:HG2_Ill_svaba_6276:HG2_Ill_scalpel_4833:HG2_Ill_manta_1375:HG2_Ill_SpiralSDKrefine_12686:HG2_Ill_GATKHC_8194:HG2_Ill_GATKHCSBGrefine_3304:HG2_Ill_250bpfermikitraw_6846:HG2_Ill_150bpfermikitraw_6379:HG2_10X_allpass_797:HG2_PB_HySA_9173;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_797:HG2_Ill_150bpfermikitraw_6379:HG2_Ill_250bpfermikitraw_6846:HG2_Ill_GATKHCSBGrefine_3304:HG2_Ill_GATKHC_8194:HG2_Ill_SpiralSDKrefine_12686:HG2_Ill_manta_1375:HG2_Ill_scalpel_4833:HG2_Ill_svaba_6276:HG3_10X_allpass_974:HG3_Ill_150bpfermikitraw_6447:HG3_Ill_250bpfermikitraw_6620:HG3_Ill_GATKHCSBGrefine_3286:HG3_Ill_GATKHC_8184:HG3_Ill_Krunchall_6875:HG3_Ill_manta_1132:HG3_Ill_scalpel_4911:HG3_Ill_svaba_6395:HG3_PB_assemblyticsfalcon_19963:HG4_10X_allpass_937:HG4_Ill_150bpfermikitraw_6590:HG4_Ill_250bpfermikitraw_6889:HG4_Ill_GATKHCSBGrefine_3442:HG4_Ill_GATKHC_8243:HG4_Ill_manta_1225:HG4_Ill_scalpel_4728:HG4_Ill_svaba_6396:HG4_PB_assemblyticsfalcon_19585;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0458015;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.0625;PBcalls=10;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-66;DistBack=58871;DistForward=7213;DistMin=7213;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=28;REFWIDENED=4:130495567-130495663;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2915.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:51:1/1:2:21:0:9:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr4	131445510	HG4_Ill_150bpfermikitraw_6601	TTGCCTCCTCCTTACTTATGTAAATTTCTGCTGCCAGTTTAAATTTATCCTCAGGAAATGGGTTTTTCTTTACCATTG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_4914:HG4_PB_HySA_7318:HG4_Ill_svaba_6405:HG4_Ill_scalpel_4735:HG4_Ill_manta_1226:HG4_Ill_Krunchall_7286:HG4_Ill_GATKHC_8259:HG4_Ill_GATKHCSBGrefine_3448:HG4_Ill_250bpfermikitraw_6901:HG4_Ill_150bpfermikitraw_6601:HG4_CG_vcfBeta_3267:HG4_10X_allpass_939:HG2_Ill_svaba_6285:HG2_Ill_scalpel_4840:HG2_Ill_manta_1378:HG2_Ill_breakscan11_681:HG2_Ill_SpiralSDKrefine_12694:HG2_Ill_Krunchall_7018:HG2_Ill_GATKHC_8205:HG2_Ill_GATKHCSBGrefine_3310:HG2_Ill_250bpfermikitraw_6856:HG2_10X_allpass_800:HG4_PB_assemblyticsfalcon_19595:HG4_Ill_Spiral_406:HG2_PB_HySA_9184:HG2_Ill_Spiral_352:HG2_PB_pbsv_4879:HG2_PB_assemblyticsPBcR_19410;NumClusterSVs=28;ExactMatchIDs=HG2_10X_allpass_800:HG2_Ill_250bpfermikitraw_6856:HG2_Ill_GATKHCSBGrefine_3310:HG2_Ill_GATKHC_8205:HG2_Ill_Krunchall_7018:HG2_Ill_SpiralSDKrefine_12694:HG2_Ill_breakscan11_681:HG2_Ill_manta_1378:HG2_Ill_scalpel_4840:HG2_Ill_svaba_6285:HG4_10X_allpass_939:HG4_CG_vcfBeta_3267:HG4_Ill_150bpfermikitraw_6601:HG4_Ill_250bpfermikitraw_6901:HG4_Ill_GATKHCSBGrefine_3448:HG4_Ill_GATKHC_8259:HG4_Ill_Krunchall_7286:HG4_Ill_manta_1226:HG4_Ill_scalpel_4735:HG4_Ill_svaba_6405;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0387097;ClusterMaxSizeDiff=0.0387097;ClusterMaxEditDist=0.038961;PBcalls=6;Illcalls=19;TenXcalls=2;CGcalls=1;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=1;HG2count=14;HG3count=0;HG4count=14;NumTechs=4;NumTechsExact=3;SVLEN=-77;DistBack=7502;DistForward=10557;DistMin=7502;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:131445509-131445589;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2916.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:45:0|1:37:3:1:38:./.:0:0:0:0:0/1:15:15:./.:.:.:.:.:.
chr4	131611192	HG2_PB_SVrefine2PBcRplusDovetail_8349	TTATATATATATATATATATATATATATATATATATATATATACACATATATATATATATACATATATATATATATATATATACACATATATATATATATACATATGTATATATATATATATACATATATATATATATATATATACACATATATATATATATACATATA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_4915:HG3_PB_pbsv_4752:HG2_PB_assemblyticsfalcon_20061:HG2_PB_assemblyticsPBcR_19412:HG4_Ill_Krunchall_7289:HG3_Ill_Krunchall_6886:HG2_Ill_Krunchall_7022:HG4_PB_SVrefine2Falcon1Dovetail_2992:HG3_PB_SVrefine2Falcon1Dovetail_3020:HG4_PB_assemblyticsfalcon_19596:HG3_PB_assemblyticsfalcon_19974:HG3_PB_HySA_7518:HG4_PB_SVrefine2PBcRDovetail_2488:HG4_PB_HySA_7319:HG4_Ill_svaba_6407:HG4_Ill_manta_1227:HG4_Ill_SVrefine2DISCOVARDovetail_3750:HG4_Ill_GATKHCSBGrefine_3449:HG4_CG_vcfBeta_3268:HG4_10X_allpass_940:HG3_PB_SVrefine2PBcRDovetail_2218:HG3_Ill_svaba_6402:HG3_Ill_manta_1135:HG3_Ill_SVrefine2DISCOVARDovetail_3787:HG3_Ill_GATKHCSBGrefine_3291:HG2_PB_SVrefine2PBcRplusDovetail_8349:HG2_PB_SVrefine2PB10Xhap12_3561:HG2_PB_SVrefine2Falcon2Bionano_2351:HG2_PB_SVrefine2Falcon1plusDovetail_8980:HG2_Ill_svaba_6287:HG2_Ill_manta_1379:HG2_Ill_SpiralSDKrefine_12698:HG2_Ill_SVrefine2DISCOVARplusDovetail_9766:HG2_Ill_GATKHCSBGrefine_3311:HG2_10X_SVrefine210Xhap12_3582:HG2_PB_pbsv_4880:HG4_Ill_MetaSV_3893:HG3_Ill_MetaSV_3880:HG2_Ill_breakscan11_682:HG2_Ill_MetaSV_3712:HG2_PB_HySA_9187;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3582:HG2_Ill_GATKHCSBGrefine_3311:HG2_Ill_SVrefine2DISCOVARplusDovetail_9766:HG2_Ill_SpiralSDKrefine_12698:HG2_Ill_manta_1379:HG2_Ill_svaba_6287:HG2_PB_SVrefine2Falcon1plusDovetail_8980:HG2_PB_SVrefine2Falcon2Bionano_2351:HG2_PB_SVrefine2PB10Xhap12_3561:HG2_PB_SVrefine2PBcRplusDovetail_8349:HG3_Ill_GATKHCSBGrefine_3291:HG3_Ill_SVrefine2DISCOVARDovetail_3787:HG3_Ill_manta_1135:HG3_Ill_svaba_6402:HG3_PB_SVrefine2PBcRDovetail_2218:HG4_10X_allpass_940:HG4_CG_vcfBeta_3268:HG4_Ill_GATKHCSBGrefine_3449:HG4_Ill_SVrefine2DISCOVARDovetail_3750:HG4_Ill_manta_1227:HG4_Ill_svaba_6407:HG4_PB_HySA_7319:HG4_PB_SVrefine2PBcRDovetail_2488;NumExactMatchSVs=23;ClusterMaxShiftDist=0.179012;ClusterMaxSizeDiff=0.179012;ClusterMaxEditDist=0.179012;PBcalls=18;Illcalls=20;TenXcalls=2;CGcalls=1;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=1;HG2count=17;HG3count=11;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-168;DistBack=4571;DistForward=-167;DistMin=-167;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=914;REFWIDENED=4:131601500-131612274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2917.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:1/1:0:31:1:24:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr4	131694825	HG2_10X_SVrefine210Xhap12_3583	TAAGAAATATAGAAGGAGATCGAAACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAAGTCCCGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_4881:HG4_Ill_GATKHCSBGrefine_3450:HG3_Ill_GATKHCSBGrefine_3293:HG2_Ill_GATKHCSBGrefine_3313:HG4_PB_assemblyticsfalcon_19597:HG3_PB_assemblyticsfalcon_19976:HG4_Ill_Spiral_407:HG3_Ill_Spiral_5387:HG2_Ill_Spiral_353:HG4_Ill_manta_1228:HG3_Ill_manta_1137:HG2_PB_SVrefine2Falcon1plusDovetail_8981:HG2_Ill_manta_1380:HG2_Ill_SpiralSDKrefine_12700:HG2_PB_assemblyticsfalcon_20063:HG3_PB_pbsv_4754:HG3_Ill_Krunchall_6890:HG2_PB_assemblyticsPBcR_19413:HG3_Ill_MetaSV_3882:HG4_PB_pbsv_4916:HG4_PB_SVrefine2Falcon1Dovetail_2993:HG4_Ill_scalpel_4736:HG4_10X_allpass_941:HG3_PB_SVrefine2PBcRDovetail_2219:HG3_PB_SVrefine2Falcon1Dovetail_3021:HG3_Ill_scalpel_4917:HG3_Ill_SVrefine2DISCOVARDovetail_3788:HG3_Ill_MetaSV_3881:HG3_10X_allpass_976:HG2_PB_SVrefine2PBcRplusDovetail_8350:HG2_PB_SVrefine2PB10Xhap12_3562:HG2_PB_HySA_9191:HG2_Ill_scalpel_4841:HG2_Ill_SVrefine2DISCOVARplusDovetail_9767:HG2_10X_allpass_801:HG2_10X_SVrefine210Xhap12_3583;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3583:HG2_10X_allpass_801:HG2_Ill_SVrefine2DISCOVARplusDovetail_9767:HG2_Ill_scalpel_4841:HG2_PB_HySA_9191:HG2_PB_SVrefine2PB10Xhap12_3562:HG2_PB_SVrefine2PBcRplusDovetail_8350:HG3_10X_allpass_976:HG3_Ill_MetaSV_3881:HG3_Ill_SVrefine2DISCOVARDovetail_3788:HG3_Ill_scalpel_4917:HG3_PB_SVrefine2Falcon1Dovetail_3021:HG3_PB_SVrefine2PBcRDovetail_2219:HG4_10X_allpass_941:HG4_Ill_scalpel_4736:HG4_PB_SVrefine2Falcon1Dovetail_2993;NumExactMatchSVs=16;ClusterMaxShiftDist=0.169421;ClusterMaxSizeDiff=0.169421;ClusterMaxEditDist=0.169421;PBcalls=14;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-249;DistBack=-92;DistForward=-236;DistMin=-236;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:131694826-131695087;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2918.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:36:0|1:21:3:2:33:./.:0:0:0:0:0/1:30:22:./.:.:.:.:.:.
chr4	132122534	HG2_PB_SVrefine2PB10Xhap12_3564	TAGTAGATAGAGGTCAAAGATACTGCTGTGAAATATCCTACAGTAGATAGAGGTCAAAGATACTGCTGTGAAATATCCTACAGTAGATAGAGGTCAAAGATACTGCTGTGAAATATCCTACAGTAGATAGAGGTCAAAGATACTGCTGTGAAATATCCTACAGTAGATAGAGGTCAAAGATACTGCTGTGAAATATCCTAC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3564:HG4_PB_pbsv_4919:HG2_PB_pbsv_4884:HG2_PB_SVrefine2PBcRplusDovetail_8351;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3564:HG2_PB_SVrefine2PBcRplusDovetail_8351;NumExactMatchSVs=2;ClusterMaxShiftDist=0.005;ClusterMaxSizeDiff=0.00498753;ClusterMaxEditDist=0.01;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-200;DistBack=-161;DistForward=-201;DistMin=-201;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=729;REFWIDENED=4:132122535-132123463;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2919.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:26:0|1:34:2:1:23:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr4	133114039	HG2_Ill_GATKHCSBGrefine_3317	GCCCATCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGTC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3587:HG2_Ill_Krunchall_7039:HG3_PB_assemblyticsfalcon_19989:HG3_PB_SVrefine2Falcon1Dovetail_3025:HG3_Ill_MetaSV_3885:HG2_Ill_MetaSV_3714:HG4_PB_assemblyticsfalcon_19609:HG4_PB_SVrefine2Falcon1Dovetail_2999:HG3_PB_pbsv_4757:HG3_Ill_scalpel_4922:HG3_Ill_manta_1139:HG3_Ill_SVrefine2DISCOVARDovetail_3793:HG3_Ill_GATKHCSBGrefine_3297:HG3_10X_allpass_977:HG2_PB_pbsv_4889:HG2_PB_assemblyticsfalcon_20070:HG2_PB_assemblyticsPBcR_19424:HG2_PB_SVrefine2PBcRplusDovetail_8354:HG2_PB_SVrefine2Falcon1plusDovetail_8984:HG2_Ill_scalpel_4850:HG2_Ill_manta_1382:HG2_Ill_GATKHCSBGrefine_3317:HG2_PB_PB10Xdip_21414:HG3_PB_SVrefine2PBcRDovetail_2225:HG2_PB_SVrefine2PB10Xhap12_3570:HG2_PB_SVrefine2Falcon2Bionano_2356;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3317:HG2_Ill_manta_1382:HG2_Ill_scalpel_4850:HG2_PB_SVrefine2Falcon1plusDovetail_8984:HG2_PB_SVrefine2PBcRplusDovetail_8354:HG2_PB_assemblyticsPBcR_19424:HG2_PB_assemblyticsfalcon_20070:HG2_PB_pbsv_4889:HG3_10X_allpass_977:HG3_Ill_GATKHCSBGrefine_3297:HG3_Ill_SVrefine2DISCOVARDovetail_3793:HG3_Ill_manta_1139:HG3_Ill_scalpel_4922:HG3_PB_pbsv_4757:HG4_PB_SVrefine2Falcon1Dovetail_2999:HG4_PB_assemblyticsfalcon_19609;NumExactMatchSVs=16;ClusterMaxShiftDist=0.015625;ClusterMaxSizeDiff=0.0125;ClusterMaxEditDist=0.175;PBcalls=14;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=-282;DistForward=3470;DistMin=-282;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=323;REFWIDENED=4:133113731-133114372;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2920.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:33:0|1:30:0:2:28:./.:0:0:0:0:0/1:21:23:./.:41:5:.:.:.
chr4	133619876	HG4_PB_SVrefine2Falcon1Dovetail_3002	TGATACTTGCATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3588:HG2_PB_HySA_9207:HG4_PB_assemblyticsfalcon_19616:HG3_PB_assemblyticsfalcon_19998:HG4_Ill_Krunchall_7312:HG3_Ill_Krunchall_6905:HG3_Ill_Spiral_5401:HG2_Ill_Spiral_355:HG3_PB_pbsv_4762:HG2_Ill_breakscan11_684:HG3_Ill_MetaSV_3888:HG4_PB_pbsv_4927:HG4_PB_SVrefine2PBcRDovetail_2497:HG4_PB_SVrefine2Falcon1Dovetail_3002:HG4_Ill_scalpel_4751:HG4_Ill_manta_1231:HG4_Ill_SVrefine2DISCOVARDovetail_3759:HG4_Ill_MetaSV_3896:HG4_Ill_GATKHCSBGrefine_3456:HG4_10X_allpass_942:HG3_PB_SVrefine2PBcRDovetail_2227:HG3_PB_SVrefine2Falcon1Dovetail_3028:HG3_PB_HySA_7536:HG3_Ill_manta_1141:HG3_Ill_SVrefine2DISCOVARDovetail_3795:HG3_Ill_GATKHCSBGrefine_3301:HG3_10X_allpass_980:HG2_PB_pbsv_4894:HG2_Ill_scalpel_4855:HG2_Ill_manta_1384:HG2_Ill_SpiralSDKrefine_12712:HG2_Ill_GATKHCSBGrefine_3321:HG2_10X_allpass_802;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3588:HG4_PB_pbsv_4927:HG4_PB_SVrefine2PBcRDovetail_2497:HG4_PB_SVrefine2Falcon1Dovetail_3002:HG4_Ill_scalpel_4751:HG4_Ill_manta_1231:HG4_Ill_SVrefine2DISCOVARDovetail_3759:HG4_Ill_MetaSV_3896:HG4_Ill_GATKHCSBGrefine_3456:HG4_10X_allpass_942:HG3_PB_SVrefine2PBcRDovetail_2227:HG3_PB_SVrefine2Falcon1Dovetail_3028:HG3_PB_HySA_7536:HG3_Ill_manta_1141:HG3_Ill_SVrefine2DISCOVARDovetail_3795:HG3_Ill_GATKHCSBGrefine_3301:HG3_10X_allpass_980:HG2_PB_pbsv_4894:HG2_Ill_scalpel_4855:HG2_Ill_manta_1384:HG2_Ill_SpiralSDKrefine_12712:HG2_Ill_GATKHCSBGrefine_3321:HG2_10X_allpass_802;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0898502;ClusterMaxSizeDiff=0.0898502;ClusterMaxEditDist=0.0898502;PBcalls=11;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=10;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=47820;DistForward=-293;DistMin=-293;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:133619877-133620196;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2921.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:45:0|1:34:6:0:33:./.:0:0:0:0:0/1:26:20:0/1:23:10:.:.:.
chr4	133819597	HG4_PB_SVrefine2Falcon1Dovetail_3003	TAAAAATGGCTGGAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_356:HG3_PB_pbsv_4763:HG2_PB_pbsv_4895:HG3_PB_HySA_7538:HG2_PB_HySA_9209:HG2_PB_assemblyticsfalcon_20079:HG2_PB_assemblyticsPBcR_19430:HG4_Ill_Krunchall_7314:HG3_Ill_Krunchall_6908:HG2_Ill_Krunchall_7044:HG4_PB_pbsv_4928:HG4_Ill_MetaSV_3897:HG3_Ill_MetaSV_3889:HG2_Ill_tnscope_549:HG2_Ill_MetaSV_3716:HG4_PB_SVrefine2PBcRDovetail_2498:HG4_PB_SVrefine2Falcon1Dovetail_3003:HG4_Ill_svaba_6422:HG4_Ill_scalpel_4752:HG4_Ill_manta_1232:HG4_Ill_SVrefine2DISCOVARDovetail_3761:HG4_Ill_GATKHCSBGrefine_3457:HG4_10X_allpass_943:HG3_PB_SVrefine2PBcRDovetail_2228:HG3_PB_SVrefine2Falcon1Dovetail_3029:HG3_Ill_svaba_6418:HG3_Ill_manta_1142:HG3_Ill_SVrefine2DISCOVARDovetail_3797:HG3_Ill_GATKHCSBGrefine_3302:HG3_10X_allpass_981:HG2_PB_SVrefine2PBcRplusDovetail_8357:HG2_PB_SVrefine2PB10Xhap12_3574:HG2_PB_SVrefine2Falcon2Bionano_2358:HG2_PB_SVrefine2Falcon1plusDovetail_8987:HG2_Ill_svaba_6304:HG2_Ill_manta_1385:HG2_Ill_SVrefine2DISCOVARplusDovetail_9775:HG2_Ill_GATKHCSBGrefine_3322:HG2_10X_allpass_803:HG2_10X_SVrefine210Xhap12_3589:HG2_Ill_breakscan11_685:HG3_Ill_Spiral_5405;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3589:HG2_10X_allpass_803:HG2_Ill_GATKHCSBGrefine_3322:HG2_Ill_SVrefine2DISCOVARplusDovetail_9775:HG2_Ill_manta_1385:HG2_Ill_svaba_6304:HG2_PB_SVrefine2Falcon1plusDovetail_8987:HG2_PB_SVrefine2Falcon2Bionano_2358:HG2_PB_SVrefine2PB10Xhap12_3574:HG2_PB_SVrefine2PBcRplusDovetail_8357:HG3_10X_allpass_981:HG3_Ill_GATKHCSBGrefine_3302:HG3_Ill_SVrefine2DISCOVARDovetail_3797:HG3_Ill_manta_1142:HG3_Ill_svaba_6418:HG3_PB_SVrefine2Falcon1Dovetail_3029:HG3_PB_SVrefine2PBcRDovetail_2228:HG4_10X_allpass_943:HG4_Ill_GATKHCSBGrefine_3457:HG4_Ill_SVrefine2DISCOVARDovetail_3761:HG4_Ill_manta_1232:HG4_Ill_scalpel_4752:HG4_Ill_svaba_6422:HG4_PB_SVrefine2Falcon1Dovetail_3003:HG4_PB_SVrefine2PBcRDovetail_2498;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0977918;ClusterMaxSizeDiff=0.0977918;ClusterMaxEditDist=0.0977918;PBcalls=15;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=24420;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:133819598-133819936;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2922.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:71:1/1:1:21:1:27:./.:0:0:0:0:1/1:0:57:0/1:3:9:.:.:.
chr4	134132421	HG2_PB_SVrefine2PBcRplusDovetail_8358	AATGAGTTTAGGATAGATGGTAACATTATTGGTAATGAATAGAATAGTATACAATGAAGCACAGTAGAATACATTGGAATAAAATCAGATCTAAAGATCTTGTTTAAAATTCTCAAATGTATGCTCCCTAAGCCTTCAGTTCCACTAGATTGAGGGTGGGCATGGAGGTGAAGTATTGGAATTTTTATTTTCAAATGGATTTGCATCCTATATCAATTCCTGAAAGATGTACAATTCCTTAGCTCCAGCCTGGAGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAACAAAAAACAAAATCAAAAACAAAAAACAAGAAAAGTCTTGAGTCCTTCAATTAAAAAAAATCTTATTTAACATTTTTTAGCCTATTATTCCTAACCACTGATCATGAAACTATTTTTTATAAAATTAGCAGCCACAAATGATAGTTACGAGGGACATACTTTAGGAAACGTTGATTTATTGTTCCACATATTTTGCAGAAGTGGAAAATTAGGCCCACGGGAGTGTGACTTAAAGTCCTGTGGCAACCTAGTAGCAGAATTGGAATTGAAATACACAAAGCTGACACGTTGTATGCATACATCAAACTCAGGAC	A	20	PASS	ClusterIDs=HG4_10X_allpass_944:HG2_PB_pbsv_4898:HG4_PB_pbsv_4930:HG3_PB_pbsv_4766:HG4_PB_HySA_7337:HG4_Ill_GATKHCSBGrefine_3460:HG2_10X_allpass_804:HG3_Ill_GATKHCSBGrefine_3309:HG2_Ill_GATKHCSBGrefine_3326:HG4_PB_SVrefine2PBcRDovetail_2499:HG4_PB_SVrefine2Falcon1Dovetail_3004:HG4_Ill_SVrefine2DISCOVARDovetail_3762:HG3_PB_SVrefine2PBcRDovetail_2230:HG3_PB_SVrefine2Falcon1Dovetail_3031:HG3_Ill_SVrefine2DISCOVARDovetail_3799:HG2_PB_SVrefine2PBcRplusDovetail_8358:HG2_PB_SVrefine2PB10Xhap12_3575:HG2_PB_SVrefine2Falcon2Bionano_2359:HG2_PB_SVrefine2Falcon1plusDovetail_8988:HG2_Ill_SVrefine2DISCOVARplusDovetail_9777:HG2_10X_SVrefine210Xhap12_3590:HG3_Ill_MetaSV_3891:HG2_Ill_MetaSV_3717:HG2_PB_PB10Xdip_21422:HG4_Ill_MetaSV_3898;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3590:HG2_Ill_SVrefine2DISCOVARplusDovetail_9777:HG2_PB_SVrefine2Falcon1plusDovetail_8988:HG2_PB_SVrefine2Falcon2Bionano_2359:HG2_PB_SVrefine2PB10Xhap12_3575:HG2_PB_SVrefine2PBcRplusDovetail_8358:HG3_Ill_SVrefine2DISCOVARDovetail_3799:HG3_PB_SVrefine2Falcon1Dovetail_3031:HG3_PB_SVrefine2PBcRDovetail_2230:HG4_Ill_SVrefine2DISCOVARDovetail_3762:HG4_PB_SVrefine2Falcon1Dovetail_3004:HG4_PB_SVrefine2PBcRDovetail_2499;NumExactMatchSVs=12;ClusterMaxShiftDist=0.273144;ClusterMaxSizeDiff=0.273144;ClusterMaxEditDist=0.273144;PBcalls=13;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-604;DistBack=-100;DistForward=-602;DistMin=-602;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=228;REFWIDENED=4:134132422-134133253;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9934;PctRecOverlap=0.9934;SizeDiff=-4;StartDistance=4;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2923.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:84:1/1:0:5:1:44:./.:0:0:0:0:0/1:3:12:0/1:4:8:.:.:.
chr4	134141602	HG2_10X_SVrefine210Xhap12_3591	TCTTCTGTCATTTCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_686:HG4_PB_HySA_7339:HG3_Ill_Krunchall_6914:HG2_Ill_Krunchall_7051:HG3_Ill_Spiral_5411:HG2_Ill_Spiral_358:HG3_PB_pbsv_4767:HG3_PB_HySA_7543:HG2_PB_HySA_9217:HG4_Ill_MetaSV_3899:HG3_Ill_MetaSV_3892:HG2_Ill_tnscope_550:HG2_Ill_MetaSV_3718:HG4_PB_pbsv_4931:HG4_PB_SVrefine2PBcRDovetail_2500:HG4_PB_SVrefine2Falcon1Dovetail_3005:HG4_Ill_svaba_6428:HG4_Ill_scalpel_4757:HG4_Ill_manta_1234:HG4_Ill_SVrefine2DISCOVARDovetail_3763:HG4_Ill_GATKHCSBGrefine_3464:HG4_10X_allpass_946:HG3_PB_SVrefine2PBcRDovetail_2231:HG3_PB_SVrefine2Falcon1Dovetail_3032:HG3_Ill_svaba_6422:HG3_Ill_scalpel_4933:HG3_Ill_manta_1144:HG3_Ill_SVrefine2DISCOVARDovetail_3800:HG3_Ill_GATKHCSBGrefine_3310:HG3_10X_allpass_983:HG2_PB_pbsv_4899:HG2_PB_SVrefine2PBcRplusDovetail_8359:HG2_PB_SVrefine2PB10Xhap12_3576:HG2_PB_SVrefine2Falcon2Bionano_2360:HG2_PB_SVrefine2Falcon1plusDovetail_8989:HG2_Ill_svaba_6310:HG2_Ill_scalpel_4861:HG2_Ill_manta_1387:HG2_Ill_SpiralSDKrefine_12717:HG2_Ill_SVrefine2DISCOVARplusDovetail_9778:HG2_Ill_GATKHCSBGrefine_3327:HG2_10X_allpass_805:HG2_10X_SVrefine210Xhap12_3591;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3591:HG2_10X_allpass_805:HG2_Ill_GATKHCSBGrefine_3327:HG2_Ill_SVrefine2DISCOVARplusDovetail_9778:HG2_Ill_SpiralSDKrefine_12717:HG2_Ill_manta_1387:HG2_Ill_scalpel_4861:HG2_Ill_svaba_6310:HG2_PB_SVrefine2Falcon1plusDovetail_8989:HG2_PB_SVrefine2Falcon2Bionano_2360:HG2_PB_SVrefine2PB10Xhap12_3576:HG2_PB_SVrefine2PBcRplusDovetail_8359:HG2_PB_pbsv_4899:HG3_10X_allpass_983:HG3_Ill_GATKHCSBGrefine_3310:HG3_Ill_SVrefine2DISCOVARDovetail_3800:HG3_Ill_manta_1144:HG3_Ill_scalpel_4933:HG3_Ill_svaba_6422:HG3_PB_SVrefine2Falcon1Dovetail_3032:HG3_PB_SVrefine2PBcRDovetail_2231:HG4_10X_allpass_946:HG4_Ill_GATKHCSBGrefine_3464:HG4_Ill_SVrefine2DISCOVARDovetail_3763:HG4_Ill_manta_1234:HG4_Ill_scalpel_4757:HG4_Ill_svaba_6428:HG4_PB_SVrefine2Falcon1Dovetail_3005:HG4_PB_SVrefine2PBcRDovetail_2500:HG4_PB_pbsv_4931;NumExactMatchSVs=30;ClusterMaxShiftDist=0.00645161;ClusterMaxSizeDiff=0.00645161;ClusterMaxEditDist=0.00647249;PBcalls=14;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=3869;DistForward=3379;DistMin=3379;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:134141603-134141926;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2924.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:0:15:2:24:./.:0:0:0:0:1/1:0:42:./.:1:14:.:.:.
chr4	134346775	HG4_PB_SVrefine2PBcRDovetail_2501	ATTCTTACAACAAATAACTGAGTCTCAGCCAATCATAGAGGCTGAGCTTTCAGCCAATCCCAGGATGCAAACTGCTCAGACATGTCCAAATAAAGCAAAGGCCACCAATCAGGCTATTTTTTTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3593:HG4_Ill_Krunchall_7320:HG2_Ill_Krunchall_7052:HG2_PB_assemblyticsfalcon_20083:HG2_PB_assemblyticsPBcR_19435:HG4_PB_assemblyticsfalcon_19620:HG4_PB_HySA_7340:HG4_Ill_Spiral_409:HG2_PB_HySA_9218:HG2_Ill_Spiral_359:HG4_PB_pbsv_4932:HG4_PB_SVrefine2PBcRDovetail_2501:HG4_PB_SVrefine2Falcon1Dovetail_3007:HG4_Ill_svaba_6429:HG4_Ill_scalpel_4758:HG4_Ill_manta_1235:HG4_Ill_GATKHC_8294:HG4_Ill_GATKHCSBGrefine_3465:HG4_10X_allpass_947:HG2_PB_pbsv_4900:HG2_PB_SVrefine2PBcRplusDovetail_8360:HG2_PB_SVrefine2PB10Xhap12_3577:HG2_PB_SVrefine2Falcon1plusDovetail_8990:HG2_Ill_svaba_6311:HG2_Ill_scalpel_4862:HG2_Ill_breakscan11_687:HG2_Ill_SpiralSDKrefine_12718:HG2_Ill_GATKHCSBGrefine_3328:HG2_10X_allpass_806;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3593:HG4_PB_pbsv_4932:HG4_PB_SVrefine2PBcRDovetail_2501:HG4_PB_SVrefine2Falcon1Dovetail_3007:HG4_Ill_svaba_6429:HG4_Ill_scalpel_4758:HG4_Ill_manta_1235:HG4_Ill_GATKHC_8294:HG4_Ill_GATKHCSBGrefine_3465:HG4_10X_allpass_947:HG2_PB_pbsv_4900:HG2_PB_SVrefine2PBcRplusDovetail_8360:HG2_PB_SVrefine2PB10Xhap12_3577:HG2_PB_SVrefine2Falcon1plusDovetail_8990:HG2_Ill_svaba_6311:HG2_Ill_scalpel_4862:HG2_Ill_breakscan11_687:HG2_Ill_SpiralSDKrefine_12718:HG2_Ill_GATKHCSBGrefine_3328:HG2_10X_allpass_806;NumExactMatchSVs=20;ClusterMaxShiftDist=0.090535;ClusterMaxSizeDiff=0.090535;ClusterMaxEditDist=0.090535;PBcalls=12;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-123;DistBack=43835;DistForward=115607;DistMin=43835;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=4:134346776-134346904;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2925.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:39:0|1:31:0:1:39:./.:0:0:0:0:0/1:24:17:./.:.:.:.:.:.
chr4	135589981	HG3_Ill_Krunchall_6925	ATTCCCTTTTGTGGTCCAGTTTTCACTGATTATAACACTCCCATATGAAATGTAAGAGAAAGATTCACAGAGGTGATGT	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6424:HG4_PB_pbsv_4943:HG2_PB_pbsv_4909:HG3_PB_pbsv_4777:HG3_PB_HySA_7553:HG4_Ill_svaba_6441:HG4_Ill_scalpel_4767:HG4_Ill_Krunchall_7330:HG4_Ill_GATKHCSBGrefine_3501:HG4_Ill_250bpfermikitraw_6939:HG4_Ill_150bpfermikitraw_6633:HG3_Ill_svaba_6431:HG3_Ill_scalpel_4941:HG3_Ill_manta_1147:HG3_Ill_Krunchall_6925:HG3_Ill_GATKHCSBGrefine_3335:HG3_Ill_250bpfermikitraw_6655:HG3_Ill_150bpfermikitraw_6488:HG3_10X_allpass_989:HG2_PB_HySA_9227:HG2_Ill_svaba_6323:HG2_Ill_manta_1391:HG2_Ill_SpiralSDKrefine_12728:HG2_Ill_Krunchall_7063:HG2_Ill_GATKHCSBGrefine_3363:HG2_Ill_250bpfermikitraw_6894;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6424:HG4_Ill_svaba_6441:HG4_Ill_scalpel_4767:HG4_Ill_Krunchall_7330:HG4_Ill_GATKHCSBGrefine_3501:HG4_Ill_250bpfermikitraw_6939:HG4_Ill_150bpfermikitraw_6633:HG3_Ill_svaba_6431:HG3_Ill_scalpel_4941:HG3_Ill_manta_1147:HG3_Ill_Krunchall_6925:HG3_Ill_GATKHCSBGrefine_3335:HG3_Ill_250bpfermikitraw_6655:HG3_Ill_150bpfermikitraw_6488:HG3_10X_allpass_989:HG2_PB_HySA_9227:HG2_Ill_svaba_6323:HG2_Ill_manta_1391:HG2_Ill_SpiralSDKrefine_12728:HG2_Ill_Krunchall_7063:HG2_Ill_GATKHCSBGrefine_3363:HG2_Ill_250bpfermikitraw_6894;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0377358;PBcalls=5;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-78;DistBack=9287;DistForward=124;DistMin=124;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=81;REFWIDENED=4:135589982-135590140;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2928.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:67:1/1:0:19:0:17:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr4	135939830	HG3_Ill_250bpfermikitraw_6660	ACAAAGGGCAAAAGCAGAACCACTGATAAGGGTCCAACAAAGATCACAAGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3599:HG2_PB_assemblyticsfalcon_20099:HG3_PB_HySA_7561:HG3_PB_assemblyticsfalcon_20020:HG4_PB_HySA_7358:HG4_PB_SVrefine2Falcon1Dovetail_3016:HG4_Ill_svaba_6448:HG4_Ill_scalpel_4776:HG4_Ill_Krunchall_7335:HG4_Ill_GATKHCSBGrefine_3509:HG4_Ill_250bpfermikitraw_6944:HG4_Ill_150bpfermikitraw_6638:HG3_PB_SVrefine2PBcRDovetail_2241:HG3_Ill_svaba_6440:HG3_Ill_scalpel_4950:HG3_Ill_Krunchall_6931:HG3_Ill_GATKHCSBGrefine_3342:HG3_Ill_250bpfermikitraw_6660:HG3_Ill_150bpfermikitraw_6497:HG2_PB_HySA_9237:HG2_Ill_svaba_6331:HG2_Ill_scalpel_4876:HG2_Ill_Krunchall_7068:HG2_Ill_GATKHCSBGrefine_3367:HG2_Ill_250bpfermikitraw_6899:HG2_Ill_150bpfermikitraw_6429;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3599:HG4_PB_SVrefine2Falcon1Dovetail_3016:HG4_Ill_svaba_6448:HG4_Ill_scalpel_4776:HG4_Ill_Krunchall_7335:HG4_Ill_GATKHCSBGrefine_3509:HG4_Ill_250bpfermikitraw_6944:HG4_Ill_150bpfermikitraw_6638:HG3_PB_SVrefine2PBcRDovetail_2241:HG3_Ill_svaba_6440:HG3_Ill_scalpel_4950:HG3_Ill_Krunchall_6931:HG3_Ill_GATKHCSBGrefine_3342:HG3_Ill_250bpfermikitraw_6660:HG3_Ill_150bpfermikitraw_6497:HG2_PB_HySA_9237:HG2_Ill_svaba_6331:HG2_Ill_scalpel_4876:HG2_Ill_Krunchall_7068:HG2_Ill_GATKHCSBGrefine_3367:HG2_Ill_250bpfermikitraw_6899:HG2_Ill_150bpfermikitraw_6429;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0952381;PBcalls=7;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=10060;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=90;REFWIDENED=4:135939831-135939970;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2929.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:1|0:2:21:24:2:./.:0:0:0:0:0/1:18:28:./.:.:.:.:.:.
chr4	137311637	HG4_Ill_manta_1240	TCTTAAACCCAGGAGGTGGAGGTGGCAGTGAGCCAAGGTCGCACCATTGAACTCCAGC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_19459:HG2_PB_PB10Xdip_21465:HG4_PB_pbsv_4954:HG4_Ill_svaba_6458:HG4_Ill_scalpel_4789:HG4_Ill_manta_1240:HG4_Ill_Krunchall_7347:HG4_Ill_GATKHC_8331:HG4_Ill_GATKHCSBGrefine_3513:HG4_Ill_FB_4602:HG4_Ill_250bpfermikitraw_6955:HG4_Ill_150bpfermikitraw_6652:HG4_CG_vcfBeta_3296:HG4_10X_allpass_952:HG2_PB_pbsv_4919:HG2_PB_SVrefine2Falcon2Bionano_2370:HG2_Ill_svaba_6342:HG2_Ill_scalpel_4886:HG2_Ill_manta_1395:HG2_Ill_SpiralSDKrefine_12744:HG2_Ill_Krunchall_7084:HG2_Ill_GATKHC_8274:HG2_Ill_GATKHCSBGrefine_3372:HG2_Ill_250bpfermikitraw_6913:HG2_Ill_150bpfermikitraw_6444:HG2_CG_vcfBeta_2928:HG2_10X_SVrefine210Xhap12_3604;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3604:HG2_CG_vcfBeta_2928:HG2_Ill_150bpfermikitraw_6444:HG2_Ill_250bpfermikitraw_6913:HG2_Ill_GATKHCSBGrefine_3372:HG2_Ill_GATKHC_8274:HG2_Ill_Krunchall_7084:HG2_Ill_SpiralSDKrefine_12744:HG2_Ill_manta_1395:HG2_Ill_scalpel_4886:HG2_Ill_svaba_6342:HG2_PB_SVrefine2Falcon2Bionano_2370:HG2_PB_pbsv_4919:HG4_10X_allpass_952:HG4_CG_vcfBeta_3296:HG4_Ill_150bpfermikitraw_6652:HG4_Ill_250bpfermikitraw_6955:HG4_Ill_FB_4602:HG4_Ill_GATKHCSBGrefine_3513:HG4_Ill_GATKHC_8331:HG4_Ill_Krunchall_7347:HG4_Ill_manta_1240:HG4_Ill_scalpel_4789:HG4_Ill_svaba_6458:HG4_PB_pbsv_4954;NumExactMatchSVs=25;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.148148;PBcalls=5;Illcalls=18;TenXcalls=2;CGcalls=2;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=2;HG2count=15;HG3count=0;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-57;DistBack=16067;DistForward=33154;DistMin=16067;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:137311638-137311696;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2930.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:37:0|1:27:7:4:21:./.:0:0:0:0:0/1:32:19:./.:.:.:.:.:.
chr4	138966208	HG2_PB_SVrefine2Falcon2Bionano_2374	AAAGAGGAGTCCTGCACGCAGGTTTTCCACCTCACAAGACTTGAATACCAGGCCACCACACAGGAGCTGAAGAGGCCCAGCTCCTGCCCTGCATAAAGTGTGAATTCCTGGTGGCTCCACCCCATTCTCCCAGTGCACATGTCTGGGCCTGGGCCACTCTACAATGATTTATTTCCCTTACTGAGAATGTGTTAAGGGACAGAATTTTTCACCACGGGCATGTTTAGGCAAGCTGCCTGTGCACAATGACTTGGGCAACATTTGGCTGTCTCCTGCCTCTATCATTAGGACATAAAATATGCTCTTCTCTCATATAAAATGCTTCCACTCGCATGCCTTCAGAAACTTTTTTTAGCCAGAGCACTAGCTTTGTGCAAAACCTTCAACACTATCCAGGCAATCTTAGACCCATACTAGTAATTTTACCAGGACGAAGATCCCTGCTGTAGTGAGGAAACCAAGTTAAAGCAATTGATCCATAGAGTCATTAGCACTCAGCTAAAATTGCCCAGATCATTATAGGACTCAGATTACAAAGGGAGTGGCCAGTGGGTGAAGAGGTGTGGAGTTCCCAAAATGGCAATTATCAGCATAGTGCTCTGACCCATTTTCAATATCTCATTACCAACTTGATAGCAAGAGAGCCTGTGTGATCAGCATGGAATGTGAAGACATTAAGAAGCAAATGTTATTATCTACAAAGTTATAGAAGCAGAAGTAATTTAGGCACACTACTTAGAAAGTGTAAAGTCCATAGGTCCAAAAATTTTAAAACATAAGTCTGGTTCAAAGACTGCAAATATTGACATTCTAAAAAATAAATAAAATAAATTTGATATTCAAAATAAAACAAACAAGTAAGAAACTATATAGTATTGTTTGTCAGATCATTTCAATTAACTAACACTTGATCATGGGAATAACATTTTTAGTTACGTATTGTTATGTAGCCTCATGTGTAGATGTAGAGAAAACAACAGTTTGGTCGGATACTTTTAAGACCAATT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_4794:HG3_Ill_GATKHCSBGrefine_3351:HG2_Ill_GATKHCSBGrefine_3378:HG2_Ill_tnscope_552:HG2_Ill_breakscan11_688:HG2_Ill_SpiralSDKrefine_12755:HG2_PB_assemblyticsfalcon_20123:HG2_Ill_MetaSV_3724:HG3_Ill_Krunchall_6952:HG2_PB_pbsv_4926:HG2_Ill_Krunchall_7097:HG3_Ill_MetaSV_3900:HG4_PB_SVrefine2Falcon1Dovetail_3019:HG3_PB_SVrefine2PBcRDovetail_2247:HG3_PB_SVrefine2Falcon1Dovetail_3051:HG3_Ill_SVrefine2DISCOVARDovetail_3818:HG3_10X_allpass_992:HG2_PB_SVrefine2PB10Xhap12_3592:HG2_PB_SVrefine2Falcon2Bionano_2374:HG2_Ill_SVrefine2DISCOVARplusDovetail_9793:HG2_10X_allpass_809:HG2_10X_SVrefine210Xhap12_3611;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3611:HG2_10X_allpass_809:HG2_Ill_SVrefine2DISCOVARplusDovetail_9793:HG2_PB_SVrefine2Falcon2Bionano_2374:HG2_PB_SVrefine2PB10Xhap12_3592:HG3_10X_allpass_992:HG3_Ill_SVrefine2DISCOVARDovetail_3818:HG3_PB_SVrefine2Falcon1Dovetail_3051:HG3_PB_SVrefine2PBcRDovetail_2247:HG4_PB_SVrefine2Falcon1Dovetail_3019;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00894188;ClusterMaxSizeDiff=0.00894188;ClusterMaxEditDist=0.00894188;PBcalls=8;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-1006;DistBack=16015;DistForward=-1003;DistMin=-1003;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=4:138966209-138967217;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2931.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:29:1|0:1:22:30:0:./.:0:0:0:0:0/1:55:21:0/1:91:42:.:.:.
chr4	139468835	HG2_PB_SVrefine2PBcRplusDovetail_8371	CAAAAAAAAAAAAAAAAAATTATCATCAGAGTGAACAGGCAACCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACAACCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAGAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGAAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAGATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3614:HG4_10X_allpass_953:HG2_10X_allpass_810:HG4_PB_assemblyticsfalcon_19669:HG3_PB_assemblyticsfalcon_20056:HG2_PB_assemblyticsPBcR_19482:HG3_10X_allpass_993:HG2_PB_assemblyticsfalcon_20127:HG4_PB_pbsv_4964:HG4_Ill_GATKHCSBGrefine_3522:HG3_PB_pbsv_4797:HG3_Ill_GATKHCSBGrefine_3354:HG2_PB_pbsv_4929:HG2_Ill_GATKHCSBGrefine_3381:HG4_Ill_Krunchall_7365:HG4_Ill_MetaSV_3909:HG3_Ill_MetaSV_3902:HG2_Ill_MetaSV_3726:HG4_PB_SVrefine2PBcRDovetail_2517:HG4_Ill_SVrefine2DISCOVARDovetail_3783:HG3_PB_SVrefine2PBcRDovetail_2249:HG3_PB_SVrefine2Falcon1Dovetail_3053:HG3_Ill_SVrefine2DISCOVARDovetail_3822:HG2_PB_SVrefine2PBcRplusDovetail_8371:HG2_PB_SVrefine2PB10Xhap12_3594:HG2_PB_SVrefine2Falcon2Bionano_2376:HG2_PB_SVrefine2Falcon1plusDovetail_9005:HG2_Ill_SVrefine2DISCOVARplusDovetail_9795;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3614:HG4_PB_SVrefine2PBcRDovetail_2517:HG4_Ill_SVrefine2DISCOVARDovetail_3783:HG3_PB_SVrefine2PBcRDovetail_2249:HG3_PB_SVrefine2Falcon1Dovetail_3053:HG3_Ill_SVrefine2DISCOVARDovetail_3822:HG2_PB_SVrefine2PBcRplusDovetail_8371:HG2_PB_SVrefine2PB10Xhap12_3594:HG2_PB_SVrefine2Falcon2Bionano_2376:HG2_PB_SVrefine2Falcon1plusDovetail_9005:HG2_Ill_SVrefine2DISCOVARplusDovetail_9795;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0194619;ClusterMaxSizeDiff=0.0194619;ClusterMaxEditDist=0.0194619;PBcalls=14;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-4386;DistBack=84431;DistForward=-4344;DistMin=-4344;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=4:139468836-139473239;PctSeqSimilarity=0.9444;PctSizeSimilarity=0.9982;PctRecOverlap=0.9941;SizeDiff=8;StartDistance=-26;EndDistance=-18;GTMatch=0;TruScore=97;MatchId=2932.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:80:1/1:0:22:0:20:./.:0:0:0:0:./.:2:18:1/1:1:332:4321:.:.
chr4	139533589	HG3_Ill_150bpfermikitraw_6522	GTGAGATGAGATGAGATGAGATGAGATGAGATGAGATGAGATGAGATGAGA	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_360:HG2_PB_HySA_9271:HG4_Ill_SVrefine2DISCOVARDovetail_3784:HG4_Ill_Krunchall_7366:HG4_Ill_GATKHCSBGrefine_3523:HG4_Ill_150bpfermikitraw_6669:HG3_Ill_SVrefine2DISCOVARDovetail_3824:HG3_Ill_GATKHC_8273:HG3_Ill_GATKHCSBGrefine_3355:HG3_Ill_250bpfermikitraw_6685:HG3_Ill_150bpfermikitraw_6522:HG2_PB_SVrefine2PBcRplusDovetail_8372:HG2_PB_SVrefine2PB10Xhap12_3595:HG2_PB_SVrefine2Falcon2Bionano_2377:HG2_PB_SVrefine2Falcon1plusDovetail_9006:HG2_Ill_scalpel_4896:HG2_Ill_breakscan11_689:HG2_Ill_SpiralSDKrefine_12758:HG2_Ill_SVrefine2DISCOVARplusDovetail_9796:HG2_Ill_Krunchall_7101:HG2_Ill_GATKHC_8295:HG2_Ill_GATKHCSBGrefine_3382:HG2_Ill_FB_4555:HG2_Ill_250bpfermikitraw_6932:HG2_Ill_150bpfermikitraw_6461:HG2_10X_SVrefine210Xhap12_3615:HG3_Ill_Spiral_5444;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3615:HG2_Ill_150bpfermikitraw_6461:HG2_Ill_250bpfermikitraw_6932:HG2_Ill_FB_4555:HG2_Ill_GATKHCSBGrefine_3382:HG2_Ill_GATKHC_8295:HG2_Ill_Krunchall_7101:HG2_Ill_SVrefine2DISCOVARplusDovetail_9796:HG2_Ill_SpiralSDKrefine_12758:HG2_Ill_breakscan11_689:HG2_Ill_scalpel_4896:HG2_PB_SVrefine2Falcon1plusDovetail_9006:HG2_PB_SVrefine2Falcon2Bionano_2377:HG2_PB_SVrefine2PB10Xhap12_3595:HG2_PB_SVrefine2PBcRplusDovetail_8372:HG3_Ill_150bpfermikitraw_6522:HG3_Ill_250bpfermikitraw_6685:HG3_Ill_GATKHCSBGrefine_3355:HG3_Ill_GATKHC_8273:HG3_Ill_SVrefine2DISCOVARDovetail_3824:HG4_Ill_150bpfermikitraw_6669:HG4_Ill_GATKHCSBGrefine_3523:HG4_Ill_Krunchall_7366:HG4_Ill_SVrefine2DISCOVARDovetail_3784;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.0392157;PBcalls=5;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=-26;DistForward=-20;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=32;REFWIDENED=4:139533590-139533671;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2933.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:55:1/1:5:22:4:17:./.:0:0:0:0:1/1:0:57:./.:.:.:.:.:.
chr4	139948014	HG2_Ill_scalpel_4898	TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTTCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTAGTAGTGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3055:HG4_Ill_MetaSV_3911:HG2_PB_HySA_9276:HG2_PB_pbsv_4931:HG4_PB_HySA_7390:HG3_PB_HySA_7600:HG3_PB_pbsv_4799:HG4_PB_pbsv_4966:HG4_Ill_scalpel_4799:HG4_Ill_GATKHCSBGrefine_3524:HG4_10X_allpass_955:HG3_Ill_scalpel_4972:HG3_Ill_GATKHCSBGrefine_3356:HG2_Ill_scalpel_4898:HG2_Ill_manta_1399:HG2_Ill_GATKHCSBGrefine_3383:HG2_10X_allpass_811:HG3_Ill_MetaSV_3903:HG2_Ill_MetaSV_3728:HG2_Ill_tnscope_553:HG2_10X_SVrefine210Xhap12_3618:HG4_PB_SVrefine2PBcRDovetail_2519:HG4_Ill_SVrefine2DISCOVARDovetail_3786:HG3_Ill_SVrefine2DISCOVARDovetail_3827:HG2_PB_SVrefine2PBcRplusDovetail_8374:HG2_PB_SVrefine2PB10Xhap12_3598:HG2_PB_SVrefine2Falcon2Bionano_2379:HG2_PB_SVrefine2Falcon1plusDovetail_9008:HG2_Ill_SVrefine2DISCOVARplusDovetail_9801:HG2_10X_SVrefine210Xhap12_3617:HG3_PB_SVrefine2PBcRDovetail_2252;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_811:HG2_Ill_GATKHCSBGrefine_3383:HG2_Ill_manta_1399:HG2_Ill_scalpel_4898:HG3_Ill_GATKHCSBGrefine_3356:HG3_Ill_scalpel_4972:HG4_10X_allpass_955:HG4_Ill_GATKHCSBGrefine_3524:HG4_Ill_scalpel_4799:HG4_PB_pbsv_4966;NumExactMatchSVs=10;ClusterMaxShiftDist=0.148041;ClusterMaxSizeDiff=0.148041;ClusterMaxEditDist=0.267241;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=30218;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=320;REFWIDENED=4:139947708-139948346;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2935.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:18:0:10:./.:0:0:0:0:1/1:0:31:./.:1:10:.:.:.
chr4	142124242	HG2_PB_SVrefine2PB10Xhap12_3602	TGAGATATATAATCTTGGAGACGATATATATATCTTGGAGATATATAATCTTGGAGACGATATATATATCTTG	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3602:HG2_PB_assemblyticsfalcon_20144:HG4_PB_pbsv_4976:HG3_PB_pbsv_4807:HG2_PB_pbsv_4941:HG3_PB_SVrefine2Falcon1Dovetail_3059;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3602:HG3_PB_SVrefine2Falcon1Dovetail_3059;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0680272;ClusterMaxSizeDiff=0.0680272;ClusterMaxEditDist=0.136054;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-72;DistBack=1993;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=252;REFWIDENED=4:142124243-142124566;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9861;PctRecOverlap=0.7397;SizeDiff=1;StartDistance=-19;EndDistance=-18;GTMatch=0;TruScore=90;MatchId=2936.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:27:0|1:45:1:4:24:./.:0:0:0:0:0/1:15:8:./.:.:.:.:.:.
chr4	142230778	HG4_Ill_MetaSV_3913	AGAGCCTCATGTAGGAAAGGGATAGCTTAACATCTGTCTACTCAGCCACGACTTCAGCTTTAACCATCTGGTAGGCCCCCAAAGCCCAAAGAAACTTCCCAGCCAAGTAACTTTGCTAACTCTTTCTCTTTATGCACACCTCTTTATCTCCCAGCCCAGCCTTCACAAAGCAGAATACTGATTCTGTATTGTGGGAGCAGATGAGCAGAGAGAGCAGACAGCAGGAGGACTGGGCTCACTGGCCACCCCTCCACCACCCGAGCCATGTGAGCTGGAGAGGACATTAAAAGCAAAAATAAATAGAGAAATCTAGAGGCTGGGTTTCTCCAAGAGACTGGACTGTCAAACTTCCTCATTGAGACTGTGCTTTACACAGGTGAGCAGAAGGTTGCATCCTCTGAGAGTTGCTGGGAAGTTAGGGACTTGCCCAAGCCTTGGTTCAGTTGCAGAGTACTCCCACTCCATCGTGTGCGAAGCACACTTCTCAATCTTGGCTGTGTATTAATGTCACCTGGGAAACTTTCAAAAATCCCAATGCCTGGGCTATGCTACAGTCCAAATAAATCACAACCATTGAGGGTAGGGTCTAGGCATTAACATCTTTAAAGAGCCCACATAAATTCAAGGTGCAATCAAATGGTGAGAGATAAAAATAAGGTTGCCTTTAATCATAACTAAGAGATTGTTCCCTATACTAAAAATATATTTGTTTTTATATTAATTCCAGGGCCTTTATAATTCCTGAACTTTTTAATGTACAAATTACAGATTTAAAGGTAAATTATAAACTTTAAAAATATTTAGGTCATCTGTTACTTAATGCTATAAAGAATACTTTTTGAAAAGGTGACAAGGGCTTATCTACACACAAGAATCTAAACTATGTCCTACATCGAGTTGTGAGAAGGCTAGCTAGACCCCAAATTGCAAAAGTAGAATATGCATTAAGACTTTATCATTATGCTATAATATGATGAGACATACTCTAATTTACCAATATATATCAGGTTGATAATGATTTTAATATCAATGGATGTATTAGTTAAGGTTCTCTAGAGAAATAAAACTAATTATCTATATCTGTATTGACATAGATATTTATTATATAAATTGCTTATGATATTACAGGGGCCAAGAAGTTCACAATCTGTTGTCTGTAAGCCAGAGAACTAGGAAAGCTGGTGGTATAATTCAGTCTGAGACTAAAGGCCTGAGAGCCAGAAGTGCCAATGTCTGAGGGCAGAAGAAGCTGAATGTCCCAGCTCAAAGAGAGAGAGCACATTTTTATTCAGACCCCCAAGAGATTGAATGATGCTCACCTGCATTGGTGAGGGAATCTATGCAGTCTACTGATTCACATGCTAATCTCTTCTAGAAACATTCTCACGGACAAACCTGGAAATAATATCTTACCAGCCACCTGGACATCCCTCAGCCCAGGCAAGTTGATACATAAATTAACCATCACACTGAGCTTCAGTAGCATCACAGAGAGTTTTAATTGGATTTAGCTCTCTTCCTCCATTACCAGAAAGAAGTACCTTGGAGAAAATGGCAGTTTGGCAGAAGTAGCAAGAACCGCACTTGTGATGTATTTTTTTTTTTCATACAAACTTTCTCTCTAATGGTACTTATTAATTTCCAAAAGCCAAATATTTGTGGTCTGACTGCATCAGAATCACTTTGGGGACCTGTTAAAAATACTGATTCCCTAGTCCAATCCCAGAACTCTGGTGCCAGCCTTTCTGGCAGTGAAGCCTGAGGAGTGATGCTCCCACGTGGCTCTGATGGCCAGCCGCCTTAGGGCAGCACTGGCAAATGCTGGCTGATGATGAAACCTTAGACTAAGAAGAAATCTGGTGGTGGGGAGAGTACATTCTTAATTAGGGAAGAAACTACTGGCTGTTAAAAGGTGATATTAGTGACTTTGTCTTTGCAGATCAAACTGCCTATGGTGCCATCTGAAAGATTCCTCCATGAATATTTAGGAGGCACTGGGAGGGTTTCCTGTATTTTTAGTGGGGTGGTGGGGAAGGGGTCACATGGTGAATTTTCACAGCAGTTTTCTTAATCTGATTGTATGTTGAAATGATTTGTTATGGAAATAGGAAAGAGGAAGTACTGTAGTCTCTCACGTGGACTCAACCATATTTTTTTAAAGTAAGATTTTCCTTTTTGTAGAGATGGTTCTTGCTTTGCTGCCCAGGCTGGTCTCGAACTCTTGGCCTCAAGCAGTTTTTCTGCCTCAGCCTCCCAAAGTGGCAAGAAACACTGTGCCAAAGCCT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_690:HG2_PB_assemblyticsfalcon_20146:HG4_PB_assemblyticsfalcon_19687:HG3_PB_assemblyticsfalcon_20077:HG2_PB_assemblyticsPBcR_19503:HG4_PB_pbsv_4977:HG3_10X_allpass_995:HG4_Ill_Krunchall_7390:HG2_Ill_Krunchall_7123:HG4_10X_allpass_956:HG2_10X_allpass_812:HG3_Ill_MetaSV_3907:HG2_Ill_tnscope_554:HG4_PB_SVrefine2PBcRDovetail_2523:HG4_Ill_SVrefine2DISCOVARDovetail_3791:HG4_Ill_MetaSV_3913:HG4_Ill_GATKHCSBGrefine_3529:HG3_PB_pbsv_4808:HG3_PB_SVrefine2Falcon1Dovetail_3060:HG2_PB_pbsv_4942:HG2_PB_SVrefine2PBcRplusDovetail_8377:HG2_PB_SVrefine2PB10Xhap12_3603:HG2_PB_SVrefine2Falcon2Bionano_2385:HG2_PB_SVrefine2Falcon1plusDovetail_9012:HG2_Ill_SpiralSDKrefine_12774:HG2_Ill_SVrefine2DISCOVARplusDovetail_9809:HG2_Ill_MetaSV_3730:HG2_Ill_GATKHCSBGrefine_3386:HG2_10X_SVrefine210Xhap12_3626;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3626:HG2_Ill_GATKHCSBGrefine_3386:HG2_Ill_MetaSV_3730:HG2_Ill_SVrefine2DISCOVARplusDovetail_9809:HG2_Ill_SpiralSDKrefine_12774:HG2_PB_SVrefine2Falcon1plusDovetail_9012:HG2_PB_SVrefine2Falcon2Bionano_2385:HG2_PB_SVrefine2PB10Xhap12_3603:HG2_PB_SVrefine2PBcRplusDovetail_8377:HG2_PB_pbsv_4942:HG3_PB_SVrefine2Falcon1Dovetail_3060:HG3_PB_pbsv_4808:HG4_Ill_GATKHCSBGrefine_3529:HG4_Ill_MetaSV_3913:HG4_Ill_SVrefine2DISCOVARDovetail_3791:HG4_PB_SVrefine2PBcRDovetail_2523;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0440183;ClusterMaxSizeDiff=0.0440183;ClusterMaxEditDist=0.0440183;PBcalls=13;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2284;DistBack=7486;DistForward=21379;DistMin=7486;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:142230779-142233078;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2937.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:84:1/1:2:12:0:12:./.:0:0:0:0:1/1:0:31:1/1:3:126:2337:.:.
chr4	142853439	HG2_Ill_svaba_6374	TCCCTCCTGCCATACAATCACGGCGACAACTTCTACTGCAATTGCTCATAAAGCCATTTGCTAAGATACAGTGGTTGTTATATATTTTAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_4980:HG2_PB_PB10Xdip_21511:HG4_Ill_svaba_6496:HG4_Ill_SVrefine2DISCOVARDovetail_3792:HG4_Ill_Krunchall_7395:HG4_Ill_GATKHC_8386:HG4_Ill_GATKHCSBGrefine_3531:HG4_Ill_Cortex_2758:HG4_Ill_250bpfermikitraw_6999:HG4_Ill_150bpfermikitraw_6700:HG4_CG_vcfBeta_3313:HG4_10X_allpass_957:HG2_PB_pbsv_4945:HG2_PB_SVrefine2Falcon1plusDovetail_9013:HG2_Ill_svaba_6374:HG2_Ill_scalpel_4909:HG2_Ill_manta_1400:HG2_Ill_breakscan11_691:HG2_Ill_SpiralSDKrefine_12779:HG2_Ill_Krunchall_7128:HG2_Ill_GATKHC_8321:HG2_Ill_GATKHCSBGrefine_3388:HG2_Ill_Cortex_6566:HG2_Ill_250bpfermikitraw_6956:HG2_Ill_150bpfermikitraw_6484:HG2_CG_vcfBeta_2947:HG2_10X_allpass_813:HG2_10X_SVrefine210Xhap12_3632:HG4_Ill_Spiral_412:HG2_Ill_Spiral_361:HG2_PB_assemblyticsfalcon_20151;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3632:HG2_10X_allpass_813:HG2_CG_vcfBeta_2947:HG2_Ill_150bpfermikitraw_6484:HG2_Ill_250bpfermikitraw_6956:HG2_Ill_Cortex_6566:HG2_Ill_GATKHCSBGrefine_3388:HG2_Ill_GATKHC_8321:HG2_Ill_Krunchall_7128:HG2_Ill_SpiralSDKrefine_12779:HG2_Ill_breakscan11_691:HG2_Ill_manta_1400:HG2_Ill_scalpel_4909:HG2_Ill_svaba_6374:HG2_PB_SVrefine2Falcon1plusDovetail_9013:HG2_PB_pbsv_4945:HG4_10X_allpass_957:HG4_CG_vcfBeta_3313:HG4_Ill_150bpfermikitraw_6700:HG4_Ill_250bpfermikitraw_6999:HG4_Ill_Cortex_2758:HG4_Ill_GATKHCSBGrefine_3531:HG4_Ill_GATKHC_8386:HG4_Ill_Krunchall_7395:HG4_Ill_SVrefine2DISCOVARDovetail_3792:HG4_Ill_svaba_6496;NumExactMatchSVs=26;ClusterMaxShiftDist=0.16185;ClusterMaxSizeDiff=0.16185;ClusterMaxEditDist=0.16185;PBcalls=5;Illcalls=21;TenXcalls=3;CGcalls=2;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=2;HG2count=19;HG3count=0;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-89;DistBack=29960;DistForward=9728;DistMin=9728;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:142853440-142853528;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2938.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:28:./.:18:9:7:17:./.:0:0:0:0:0/1:35:25:./.:.:.:.:.:.
chr4	142975122	HG4_Ill_GATKHCSBGrefine_3532	AAATGGTTTTAGGCAATTCTTAGGACACTGGGGAGATCTGCTCTGTTTTTTATTTTATAATTCTAATCGACCCTCACCTTCATGTATTGTCTTTGGAT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_362:HG2_PB_HySA_9299:HG2_PB_assemblyticsPBcR_19508:HG4_PB_pbsv_4981:HG4_Ill_svaba_6498:HG4_Ill_scalpel_4818:HG4_Ill_manta_1245:HG4_Ill_Krunchall_7397:HG4_Ill_GATKHC_8390:HG4_Ill_GATKHCSBGrefine_3532:HG4_Ill_Cortex_2759:HG4_Ill_250bpfermikitraw_7001:HG4_Ill_150bpfermikitraw_6703:HG4_10X_allpass_958:HG2_PB_pbsv_4946:HG2_PB_SVrefine2PBcRplusDovetail_8378:HG2_PB_SVrefine2PB10Xhap12_3605:HG2_PB_SVrefine2Falcon2Bionano_2386:HG2_Ill_svaba_6377:HG2_Ill_breakscan11_692:HG2_Ill_SpiralSDKrefine_12781:HG2_Ill_SVrefine2DISCOVARplusDovetail_9813:HG2_Ill_Krunchall_7132:HG2_Ill_GATKHC_8325:HG2_Ill_GATKHCSBGrefine_3389:HG2_Ill_Cortex_6567:HG2_Ill_250bpfermikitraw_6958:HG2_Ill_150bpfermikitraw_6488:HG2_10X_allpass_814:HG2_10X_SVrefine210Xhap12_3633;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3633:HG2_10X_allpass_814:HG2_Ill_150bpfermikitraw_6488:HG2_Ill_250bpfermikitraw_6958:HG2_Ill_Cortex_6567:HG2_Ill_GATKHCSBGrefine_3389:HG2_Ill_GATKHC_8325:HG2_Ill_Krunchall_7132:HG2_Ill_SVrefine2DISCOVARplusDovetail_9813:HG2_Ill_SpiralSDKrefine_12781:HG2_Ill_breakscan11_692:HG2_Ill_svaba_6377:HG2_PB_SVrefine2Falcon2Bionano_2386:HG2_PB_SVrefine2PB10Xhap12_3605:HG2_PB_SVrefine2PBcRplusDovetail_8378:HG2_PB_pbsv_4946:HG4_10X_allpass_958:HG4_Ill_150bpfermikitraw_6703:HG4_Ill_250bpfermikitraw_7001:HG4_Ill_Cortex_2759:HG4_Ill_GATKHCSBGrefine_3532:HG4_Ill_GATKHC_8390:HG4_Ill_Krunchall_7397:HG4_Ill_manta_1245:HG4_Ill_scalpel_4818:HG4_Ill_svaba_6498;NumExactMatchSVs=26;ClusterMaxShiftDist=0.162679;ClusterMaxSizeDiff=0.162679;ClusterMaxEditDist=0.162679;PBcalls=7;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-97;DistBack=11416;DistForward=3045;DistMin=3045;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:142975123-142975221;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2939.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:1|0:3:27:23:4:./.:0:0:0:0:0/1:26:27:./.:.:.:.:.:.
chr4	143502619	HG4_Ill_150bpfermikitraw_6709	GGAAATAGATAGAAGTTCCATTTCTATCTATTAGAAATAGATAGAAGTTCCATTTCTATCTATTAGAAATAGATAGAAGTTCCATTTCTATCTATTA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_6965:HG2_10X_SVrefine210Xhap12_3636:HG4_PB_HySA_7422:HG4_PB_pbsv_4987:HG2_PB_pbsv_4951:HG4_PB_SVrefine2PBcRDovetail_2527:HG4_Ill_svaba_6503:HG4_Ill_SVrefine2DISCOVARDovetail_3796:HG4_Ill_GATKHCSBGrefine_3537:HG4_Ill_250bpfermikitraw_7008:HG4_Ill_150bpfermikitraw_6709:HG2_Ill_svaba_6380:HG2_Ill_manta_1401:HG2_Ill_GATKHCSBGrefine_3393;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_6965:HG4_PB_SVrefine2PBcRDovetail_2527:HG4_Ill_svaba_6503:HG4_Ill_SVrefine2DISCOVARDovetail_3796:HG4_Ill_GATKHCSBGrefine_3537:HG4_Ill_250bpfermikitraw_7008:HG4_Ill_150bpfermikitraw_6709:HG2_Ill_svaba_6380:HG2_Ill_manta_1401:HG2_Ill_GATKHCSBGrefine_3393;NumExactMatchSVs=10;ClusterMaxShiftDist=0.113402;ClusterMaxSizeDiff=0.113402;ClusterMaxEditDist=0.114583;PBcalls=4;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-96;DistBack=7063;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=123;REFWIDENED=4:143502652-143502838;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2940.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:31:0|1:48:3:4:27:./.:0:0:0:0:0/1:43:22:./.:.:.:.:.:.
chr4	143810760	HG3_Ill_svaba_6491	TACACACATATATATACTATATATATACATACATAGTATATATATACATATATATACTATATATATACATAC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6492:HG2_PB_pbsv_4952:HG3_Ill_GATKHC_8322:HG2_Ill_GATKHC_8331:HG3_PB_HySA_7633:HG3_PB_pbsv_4815:HG3_Ill_Krunchall_7003:HG3_Ill_manta_1154:HG2_Ill_manta_1402:HG3_Ill_svaba_6491:HG3_Ill_Krunchall_7002:HG3_Ill_250bpfermikitraw_6724:HG3_Ill_150bpfermikitraw_6561:HG2_Ill_svaba_6381:HG2_Ill_Krunchall_7140:HG2_Ill_250bpfermikitraw_6966;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6492:HG3_Ill_svaba_6491:HG3_Ill_Krunchall_7002:HG3_Ill_250bpfermikitraw_6724:HG3_Ill_150bpfermikitraw_6561:HG2_Ill_svaba_6381:HG2_Ill_Krunchall_7140:HG2_Ill_250bpfermikitraw_6966;NumExactMatchSVs=8;ClusterMaxShiftDist=0.198473;ClusterMaxSizeDiff=0.198473;ClusterMaxEditDist=0.210526;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-71;DistBack=-7;DistForward=12;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=147;REFWIDENED=4:143810678-143810895;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2941.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:38:0|1:28:0:4:38:./.:0:0:0:0:0/1:24:28:./.:.:.:.:.:.
chr4	145235329	HG2_Ill_250bpfermikitraw_6971	TCTCCAGTGGGAGTGTTTGTTCAGGAGAGGAGGGTCTCCCTTTCCCACTTCCACAGTTGGGATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3641:HG2_PB_HySA_9328:HG2_PB_pbsv_4954:HG4_PB_pbsv_4990:HG4_PB_HySA_7438:HG4_Ill_svaba_6508:HG4_Ill_manta_1247:HG4_Ill_SVrefine2DISCOVARDovetail_3804:HG4_Ill_Krunchall_7409:HG4_Ill_GATKHCSBGrefine_3539:HG4_Ill_250bpfermikitraw_7012:HG2_Ill_svaba_6387:HG2_Ill_scalpel_4916:HG2_Ill_manta_1405:HG2_Ill_SpiralSDKrefine_12787:HG2_Ill_SVrefine2DISCOVARplusDovetail_9820:HG2_Ill_Krunchall_7143:HG2_Ill_GATKHCSBGrefine_3394:HG2_Ill_250bpfermikitraw_6971:HG2_Ill_150bpfermikitraw_6499;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3641:HG4_PB_HySA_7438:HG4_Ill_svaba_6508:HG4_Ill_manta_1247:HG4_Ill_SVrefine2DISCOVARDovetail_3804:HG4_Ill_Krunchall_7409:HG4_Ill_GATKHCSBGrefine_3539:HG4_Ill_250bpfermikitraw_7012:HG2_Ill_svaba_6387:HG2_Ill_scalpel_4916:HG2_Ill_manta_1405:HG2_Ill_SpiralSDKrefine_12787:HG2_Ill_SVrefine2DISCOVARplusDovetail_9820:HG2_Ill_Krunchall_7143:HG2_Ill_GATKHCSBGrefine_3394:HG2_Ill_250bpfermikitraw_6971:HG2_Ill_150bpfermikitraw_6499;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0472441;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.0645161;PBcalls=4;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-63;DistBack=60086;DistForward=17680;DistMin=17680;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=4:145235330-145235463;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2942.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:21:0|1:24:2:0:14:./.:0:0:0:0:0/1:20:19:./.:.:.:.:.:.
chr4	145316445	HG2_PB_SVrefine2PB10Xhap12_3608	AACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAATGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATATGCAAATCAATAAATGTAATCCAGGATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAAAAACTCTTCACGCTAAAAACTCTCAATAAATTAGGTATTGATTGGATGTATCTCAAAATAATAAGAGCTGTCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGACAATTAGGAAGGAGAAGGAAATAAAGGGTATTCTATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAGACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAACGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAAGAAATAGAAGAACATTCCATGCTCATGGGTAGGAAAAATCAATATCATGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCACCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAAACTACTTTAAAGTTCGTATGGAAACAAAAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTTCCTGACTTCAAACTATACTACAAGACTACAGTAACCCAAACAGCATGGTACCGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTCATAAATGGTGCTGGGAAAACTGGCTAGCTATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGACTTAAACGTTAGCCCTAACACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGTGAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAAATAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAACATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATATACAATAAAAAAACAAACAACCCCATCAAAGAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCATGCCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACCTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCATTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCGTTTGACCCAGCCATCCCATTACTGGGTATGTGCCCAAAGGACTATAAATCATGTTGCTATAAAGACACATGCACATGTATGTTTATTGTGGTACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCACATATTCTCACTCATAGGTGGGAACTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCGCACTCTGGGGACTGTTGTGGGGTGGGGGGAGGGTGGAGGGATAGCTTTAAGAGATATACCTATTGCTAAATGATGAGTTAATGGGTGCAGCACACCAGTATGGCACATGTATACATATGTAACTAACCTGCACATTGTGCACATGTACCCCAAAACTTAAAGTATAATAATAAAAAAAGAAAAAAAAAGAAAAAGCACACTATTAAAAAACATAGTAAAATGAGTGAAAAATATTTACCATGCTAACAATAATCTAAAGAAAGTTGTAGTGTCTATTTTAATATCTTGCAAAATTAATTTTAGAACAAGAAATATTACAAGGGATATAATAAGGGTATTTTTGAACCTACGTTGCATGTAGGTTCAAAATACATGAAAAAGTAAAAAGTCCTCTCTGAATAGTTCATAGTATAAGCAGACCTAAAATTAGAAAAAAATTTAGTAGGCATGTATAACACTGTCAACCAATTTGACCTAATTATCACTTATAGACCATTCCTTCCAATATCAGCAGAATACACACCCAATTTTCAATGGCCCATAGAACACTTAGAAACCATGTTAGGTGATACAAGTTTCAATGAATTTAAAAGGATTCTCAGCATATAGAATATGTTCATTAACAACAATAAAATTAAAGCAGAAATCAATAATAAAACATATTTTTAAATTCCCAGATATTTGAAGATAAACACTACAATTCCAAATAACCCATGGGTTAAAGAAGAAATCCCAAAAGATATTAGAAAATATTTTGAACCAAATTAAGATGAAATCACAGCACATTAAAATTTGAAGATTCAAGCTAAAACAATGTGTAGAAAAAAATTTATACTTTAAATGTTTATATTAGGAAATAATAAATACTTAAGATTAATGGTCCTTATAACTTCCACCTTAAGAAATTAGAAAAAGTAGTACAATTAACTCAGGAGGAGGAAGGAAATAATACTGGAAATCAATAAAATAGACAATAAAATAAAATAGAAAAAAATTAATGAAACCAAAATCTGGTTCTCTGGAAAGCTTAATAAAATTAATAAGCTTCTAGTTATATTAATGAAAGTGAGAGAGAGAGAAGACACAAATTACCAATATTAAGAATAAAAAGGGGATATTATTGCAGAACCCATAGAAATTGAAATTGCAACAAAGAATTATTAAAACAAGTATATGCCAAATAATTTTTAAGCTTAGATTAAAAAATAACCATATTTACTGAAATAGACTAATTATAGAACTG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3733:HG4_10X_allpass_960:HG2_Ill_Krunchall_7145:HG2_PB_pbsv_4955:HG4_PB_pbsv_4991:HG4_Ill_MetaSV_3916:HG3_PB_SVrefine2Falcon1Dovetail_3068:HG2_PB_assemblyticsPBcR_19519:HG2_PB_SVrefine2PBcRplusDovetail_8384:HG2_PB_SVrefine2PB10Xhap12_3608:HG2_PB_SVrefine2Falcon2Bionano_2390:HG2_PB_SVrefine2Falcon1plusDovetail_9017:HG2_10X_SVrefine210Xhap12_3642:HG2_Ill_tnscope_555:HG2_10X_allpass_815:HG2_PB_HySA_9330;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3642:HG2_PB_SVrefine2Falcon1plusDovetail_9017:HG2_PB_SVrefine2Falcon2Bionano_2390:HG2_PB_SVrefine2PB10Xhap12_3608:HG2_PB_SVrefine2PBcRplusDovetail_8384:HG2_PB_assemblyticsPBcR_19519:HG3_PB_SVrefine2Falcon1Dovetail_3068:HG4_Ill_MetaSV_3916:HG4_PB_pbsv_4991;NumExactMatchSVs=9;ClusterMaxShiftDist=0.013801;ClusterMaxSizeDiff=0.013801;ClusterMaxEditDist=0.013801;PBcalls=9;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-3460;DistBack=63371;DistForward=-3459;DistMin=-3459;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:145316446-145319907;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2943.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:26:./.:19:14:12:7:./.:0:0:0:0:0/1:75:15:0/1:270:131:3769:.:.
chr4	145959973	HG2_PB_SVrefine2PBcRplusDovetail_8386	CAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTAACTAAGGCAAAACCTATAAGAAGCAGGCAACAAATTCAACAGATACTTCTGATGACGAGACATCACTTTCTACAGAGAAAAATAGGTCACATGCAAAGCATCAGAAATCAAAAGTGGCATTGTATTTCTCAACATTTACAATAAAAACAATGTCTCAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3643:HG2_PB_pbsv_4957:HG4_PB_pbsv_4992:HG2_Ill_SVrefine2DISCOVARplusDovetail_9822:HG2_PB_SVrefine2Falcon2Bionano_2392:HG2_PB_SVrefine2Falcon1plusDovetail_9019:HG2_PB_SVrefine2PBcRplusDovetail_8386:HG2_PB_SVrefine2PB10Xhap12_3611;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3643:HG2_PB_SVrefine2PBcRplusDovetail_8386:HG2_PB_SVrefine2PB10Xhap12_3611;NumExactMatchSVs=3;ClusterMaxShiftDist=0.185915;ClusterMaxSizeDiff=0.185915;ClusterMaxEditDist=0.185915;PBcalls=6;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-192;DistBack=11863;DistForward=-77;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=190;REFWIDENED=4:145959968-145960349;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2944.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:26:0|1:34:3:1:20:./.:0:0:0:0:0/1:7:2:./.:.:.:.:.:.
chr4	146438806	HG2_Ill_GATKHCSBGrefine_3395	TTTGGCCATTTTTTTAGTGCTGAATTTTCAGTTTATCTATACCTTTTGACCATCTTCTTCCCTTCTTTGGTCATTTTATGGCTATTACACCTCTGATACAAGGTGAAAAGTTAAAACCAATACTGAGATGAATTTGTTACTCTTAATAACATATGTGCTAATAAAATAATGGGGAAGAGGTGGAAAACTGGCTTACATAGGCATTTTGAGACTCCACAAATGCCATTTCAGCCTCTCCTTTACCCAGGAATCTTGTGAGTCATGGATAGAATAGAACAGTTCTGGAAAACATGGAGGCTGAGGCTAAGATCTATTTAATTTGAACATATCAAGATTTTATGTATATTTTTCACATTATGAAGTGACTGATGTGGGAATTGGAACAAAGGACTTTTTCCAGAGACCACTATGAAGCAGTCCCTGTACCTTCTGAAGAGAAACTCTACTAAATCAAAGTGCAAGAGGCAGCCAGATGTGGTGGTACATGCCTGTAGTCTCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCCCAGAGTTGAAGGCTGCAGCACACTATGATCATGCCTGTAAATAGCCATTACGTTCTAGCCTGGGCAGTGTAGTGAGACTCTGTCTCAGAAAAATAAAGTTAAAAAAATGCAGCATAGTAAAACCCCATCTCTACTAAAAATACAAAAATAAGCCTGGCGAGGTGGGGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGAAAAATCACTTGAACCTGAGAGGCGCAGGTTGTAGTGAGCCAAGATCATGCCATTGCACTCCAGCCTGGGGGACAAGAGTGAAACTCCATCTCAAAAAAAAAAAATAAAAATGTGCAAGGTGACTTAGCCCCTCACACTGCCAGAATTGAAGCCCTCTATAAAGCCGTACAGAGTACACCTGGGTATTGTTTTTGTGAAATCAGAAAAAGGGGGTCTGGAATTCTAAGCTGCACATATACACAGCTCAACACTGAATTATTTTGAACTTTGTCACTATTTTACTTCTGATGAAGTATCTCAAAGAACAGTTTAGCAGTTTAACATATTTAAGTCTCCCAAACTTGGTGACTTCTGCTGAGGTCTCAATGACTCTTGAAAAAAACTCAAAAATTGAGAATATTTAGGTTTAGAGTAGTGGTTTTCAAAGTGTCGTCCACAGAGTAGTAGCATCAGTACCACCTTGGAACTTGTTAGAAAAGCTAATTATTATTTTTAAATTGACAAATAATTGTATATATTTGTGGAATACAGTGTTATGTTTTGGTACATGTATACATTGTGGAATGATCAAATGAGGCTAATTAACATATCTGTCACCTCCCATGTGTATTTGCTTATTTCTTTCTTTTTCTTTTTTTCTCTTTTTTTTACTGCCTATTCTCTGAACCATTTTTTTGTTTGTTTGGTTGGCTTTTTTTTTTTTTTTTTTTTTTTTTGAGGTAGAGTCTCGCTCTGTTGACCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGATCAAGAGATTCTCCTGCCTCAGCCTCCCGAGTAGCTAGGATTACAGACGTGCATCACCACGCCCAGCTAATTTTTGTATTTTTAGTAAAGATGGGGTTTTACCATG	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3913:HG2_PB_HySA_9337:HG4_10X_allpass_961:HG3_10X_allpass_999:HG2_10X_allpass_816:HG2_PB_assemblyticsfalcon_20170:HG2_PB_assemblyticsPBcR_19525:HG4_PB_pbsv_4993:HG4_Ill_MetaSV_3917:HG4_PB_SVrefine2PBcRDovetail_2529:HG3_PB_pbsv_4821:HG3_PB_SVrefine2PBcRDovetail_2262:HG2_PB_pbsv_4958:HG2_PB_SVrefine2PBcRplusDovetail_8387:HG2_PB_SVrefine2PB10Xhap12_3613:HG2_PB_SVrefine2Falcon2Bionano_2393:HG2_PB_SVrefine2Falcon1plusDovetail_9020:HG2_Ill_breakscan11_693:HG2_Ill_SpiralSDKrefine_12791:HG2_Ill_SVrefine2DISCOVARplusDovetail_9825:HG2_Ill_GATKHCSBGrefine_3395:HG2_10X_SVrefine210Xhap12_3644:HG2_Ill_MetaSV_3734:HG2_Ill_tnscope_556;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3644:HG2_Ill_GATKHCSBGrefine_3395:HG2_Ill_SVrefine2DISCOVARplusDovetail_9825:HG2_Ill_SpiralSDKrefine_12791:HG2_Ill_breakscan11_693:HG2_PB_SVrefine2Falcon1plusDovetail_9020:HG2_PB_SVrefine2Falcon2Bionano_2393:HG2_PB_SVrefine2PB10Xhap12_3613:HG2_PB_SVrefine2PBcRplusDovetail_8387:HG2_PB_pbsv_4958:HG3_PB_SVrefine2PBcRDovetail_2262:HG3_PB_pbsv_4821:HG4_PB_SVrefine2PBcRDovetail_2529;NumExactMatchSVs=13;ClusterMaxShiftDist=0.177666;ClusterMaxSizeDiff=0.177666;ClusterMaxEditDist=0.177666;PBcalls=12;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-1644;DistBack=67667;DistForward=-1638;DistMin=-1638;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=4:146438807-146440457;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2945.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:93:1/1:6:36:0:7:./.:0:0:0:0:1/1:0:20:1/1:2:98:1724:.:.
chr4	147730177	HG2_PB_SVrefine2Falcon1plusDovetail_9022	GTACCAAAACAGAGATATAGATCAATGGAAAAGAACAGAGTCTTCAGAAATAATGCCACACATCTACAACCAACTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGCAAAAAACTGAAACTGGGTCCCTTCCTTACACCTTATACAAAAATTAACTCAAGATGGATTAAAAACTTAAACGTAAGACCTAAAACCATAAAAACCCCAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAAGACTTCATGACTAAAGCACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGTAAAATAAACTATCATCAGAGTGAACAGACAACCTACAGAATGGGAGAAAATTTTTGCAATCTAGCCAACTGACAAAGGGCTAAAATCCAGAATCGACAAAGGGCTAAAATCCAGAATCTACAAAGAACTTCAACAAATTTACAAGAAAAAAAACAAACAACTCCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTTATAAGAAGACATTTATGCGGCCACCAAACATATGAAAAAAAAGCTCATCATTACTGGCCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCATGCCAGTTAGAATGGTGATCATTAAAAACTCAGGAAACAACAGATGCCGGAGAGAATGTGGAGAAATAGAAACGTTTTTATCCGTTGGTGGGCGTGTAAATTAGTCCAACCATTGCAGAAGACAGGGTGGCAATTTCTCAAGAATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATTCCCCAAGGATTATAAATCA	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_7156:HG4_PB_assemblyticsfalcon_19714:HG4_PB_SVrefine2Falcon1Dovetail_3026:HG4_Ill_manta_1249:HG2_PB_assemblyticsfalcon_20175:HG2_PB_SVrefine2Falcon2Bionano_2394:HG2_PB_SVrefine2Falcon1plusDovetail_9022:HG2_Ill_manta_1407:HG2_Ill_SVrefine2DISCOVARplusDovetail_9830:HG2_10X_SVrefine210Xhap12_3649:HG2_Ill_tnscope_557:HG4_PB_SVrefine2PBcRDovetail_2530:HG4_Ill_MetaSV_3918:HG2_10X_allpass_817:HG2_PB_pbsv_4964:HG4_PB_pbsv_5000:HG2_Ill_MetaSV_3736:HG4_Ill_Krunchall_7426;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3649:HG2_Ill_SVrefine2DISCOVARplusDovetail_9830:HG2_Ill_manta_1407:HG2_PB_SVrefine2Falcon1plusDovetail_9022:HG2_PB_SVrefine2Falcon2Bionano_2394:HG2_PB_assemblyticsfalcon_20175:HG4_Ill_manta_1249:HG4_PB_SVrefine2Falcon1Dovetail_3026:HG4_PB_assemblyticsfalcon_19714;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0850394;ClusterMaxSizeDiff=0.0850394;ClusterMaxEditDist=0.0860892;PBcalls=8;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-913;DistBack=-567;DistForward=-911;DistMin=-911;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:147730178-147731091;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2946.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:18:0|1:34:0:2:12:./.:0:0:0:0:0/1:58:17:0/1:68:38:.:.:.
chr4	148362894	HG3_Ill_GATKHCSBGrefine_3372	GGATAATTCAATACAGAAATAAGGAAAGATAAGACATAGATGGTGAAAAGCAGCACCGTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3652:HG3_Ill_Spiral_5497:HG2_Ill_Spiral_363:HG2_PB_pbsv_4970:HG3_Ill_svaba_6512:HG3_Ill_scalpel_5018:HG3_Ill_manta_1158:HG3_Ill_Krunchall_7028:HG3_Ill_GATKHC_8350:HG3_Ill_GATKHCSBGrefine_3372:HG3_Ill_Cortex_2773:HG3_Ill_250bpfermikitraw_6755:HG3_Ill_150bpfermikitraw_6585:HG2_Ill_svaba_6402:HG2_Ill_scalpel_4932:HG2_Ill_manta_1409:HG2_Ill_breakscan11_694:HG2_Ill_SpiralSDKrefine_12799:HG2_Ill_Krunchall_7162:HG2_Ill_GATKHC_8364:HG2_Ill_GATKHCSBGrefine_3398:HG2_Ill_Cortex_6587:HG2_Ill_250bpfermikitraw_6991:HG2_Ill_150bpfermikitraw_6515:HG2_PB_HySA_9352:HG3_PB_pbsv_4831:HG3_PB_HySA_7670:HG3_PB_SVrefine2PBcRDovetail_2268:HG3_PB_SVrefine2Falcon1Dovetail_3076:HG2_PB_SVrefine2PBcRplusDovetail_8392:HG2_PB_SVrefine2PB10Xhap12_3618:HG2_PB_SVrefine2Falcon1plusDovetail_9024;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6515:HG2_Ill_250bpfermikitraw_6991:HG2_Ill_Cortex_6587:HG2_Ill_GATKHCSBGrefine_3398:HG2_Ill_GATKHC_8364:HG2_Ill_Krunchall_7162:HG2_Ill_SpiralSDKrefine_12799:HG2_Ill_breakscan11_694:HG2_Ill_manta_1409:HG2_Ill_scalpel_4932:HG2_Ill_svaba_6402:HG3_Ill_150bpfermikitraw_6585:HG3_Ill_250bpfermikitraw_6755:HG3_Ill_Cortex_2773:HG3_Ill_GATKHCSBGrefine_3372:HG3_Ill_GATKHC_8350:HG3_Ill_Krunchall_7028:HG3_Ill_manta_1158:HG3_Ill_scalpel_5018:HG3_Ill_svaba_6512;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0672269;PBcalls=9;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-59;DistBack=58;DistForward=89922;DistMin=58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3822;REFWIDENED=4:148359078-148372356;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2948.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:39:0|1:37:1:2:37:./.:0:0:0:0:0/1:19:24:./.:.:.:.:.:.
chr4	150161039	HG3_Ill_scalpel_5025	TAAAACTGGGCTGCTCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTACCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_5512:HG4_PB_assemblyticsfalcon_19735:HG3_PB_assemblyticsfalcon_20133:HG2_PB_assemblyticsfalcon_20198:HG2_PB_assemblyticsPBcR_19550:HG4_Ill_Krunchall_7447:HG2_PB_pbsv_4976:HG2_Ill_Krunchall_7179:HG3_Ill_Krunchall_7044:HG4_PB_pbsv_5009:HG2_PB_HySA_9370:HG3_PB_pbsv_4839:HG4_Ill_MetaSV_3922:HG3_PB_HySA_7690:HG3_Ill_MetaSV_3916:HG2_Ill_tnscope_558:HG4_PB_SVrefine2PBcRDovetail_2534:HG4_PB_SVrefine2Falcon1Dovetail_3033:HG4_PB_HySA_7476:HG4_Ill_scalpel_4852:HG4_Ill_manta_1253:HG4_Ill_SVrefine2DISCOVARDovetail_3817:HG4_Ill_GATKHCSBGrefine_3551:HG4_10X_allpass_964:HG3_PB_SVrefine2PBcRDovetail_2270:HG3_PB_SVrefine2Falcon1Dovetail_3079:HG3_Ill_scalpel_5025:HG3_Ill_manta_1160:HG3_Ill_SVrefine2DISCOVARDovetail_3863:HG3_Ill_GATKHCSBGrefine_3379:HG3_10X_allpass_1000:HG2_PB_SVrefine2PBcRplusDovetail_8396:HG2_PB_SVrefine2PB10Xhap12_3622:HG2_PB_SVrefine2Falcon2Bionano_2400:HG2_PB_SVrefine2Falcon1plusDovetail_9027:HG2_Ill_scalpel_4941:HG2_Ill_manta_1414:HG2_Ill_breakscan11_696:HG2_Ill_SVrefine2DISCOVARplusDovetail_9844:HG2_Ill_MetaSV_3740:HG2_Ill_GATKHCSBGrefine_3401:HG2_10X_allpass_818:HG2_10X_SVrefine210Xhap12_3658;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3658:HG2_10X_allpass_818:HG2_Ill_GATKHCSBGrefine_3401:HG2_Ill_MetaSV_3740:HG2_Ill_SVrefine2DISCOVARplusDovetail_9844:HG2_Ill_breakscan11_696:HG2_Ill_manta_1414:HG2_Ill_scalpel_4941:HG2_PB_SVrefine2Falcon1plusDovetail_9027:HG2_PB_SVrefine2Falcon2Bionano_2400:HG2_PB_SVrefine2PB10Xhap12_3622:HG2_PB_SVrefine2PBcRplusDovetail_8396:HG3_10X_allpass_1000:HG3_Ill_GATKHCSBGrefine_3379:HG3_Ill_SVrefine2DISCOVARDovetail_3863:HG3_Ill_manta_1160:HG3_Ill_scalpel_5025:HG3_PB_SVrefine2Falcon1Dovetail_3079:HG3_PB_SVrefine2PBcRDovetail_2270:HG4_10X_allpass_964:HG4_Ill_GATKHCSBGrefine_3551:HG4_Ill_SVrefine2DISCOVARDovetail_3817:HG4_Ill_manta_1253:HG4_Ill_scalpel_4852:HG4_PB_HySA_7476:HG4_PB_SVrefine2Falcon1Dovetail_3033:HG4_PB_SVrefine2PBcRDovetail_2534;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0986547;ClusterMaxSizeDiff=0.0986547;ClusterMaxEditDist=0.0986547;PBcalls=18;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-342;DistBack=28556;DistForward=29093;DistMin=28556;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=4:150161040-150161398;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2949.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:0:28:0:26:./.:0:0:0:0:1/1:0:36:0/1:2:8:.:.:.
chr4	150951027	HG3_Ill_manta_1161	TTAAAGTATTTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAACAAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3741:HG3_PB_pbsv_4840:HG3_Ill_Krunchall_7051:HG4_PB_assemblyticsfalcon_19740:HG3_PB_assemblyticsfalcon_20137:HG2_PB_assemblyticsfalcon_20204:HG2_PB_assemblyticsPBcR_19552:HG4_Ill_Krunchall_7454:HG2_Ill_Krunchall_7189:HG3_Ill_Krunchall_7050:HG2_Ill_Krunchall_7188:HG3_PB_HySA_7695:HG4_PB_pbsv_5013:HG4_PB_SVrefine2PBcRDovetail_2539:HG4_PB_SVrefine2Falcon1Dovetail_3034:HG4_Ill_scalpel_4854:HG4_Ill_manta_1254:HG4_Ill_SVrefine2DISCOVARDovetail_3822:HG4_Ill_GATKHCSBGrefine_3555:HG4_10X_allpass_965:HG3_PB_SVrefine2PBcRDovetail_2271:HG3_PB_SVrefine2Falcon1Dovetail_3080:HG3_Ill_scalpel_5029:HG3_Ill_manta_1161:HG3_Ill_SVrefine2DISCOVARDovetail_3865:HG3_Ill_GATKHCSBGrefine_3380:HG3_10X_allpass_1001:HG2_PB_pbsv_4977:HG2_PB_SVrefine2PBcRplusDovetail_8397:HG2_PB_SVrefine2PB10Xhap12_3623:HG2_PB_SVrefine2Falcon2Bionano_2402:HG2_PB_SVrefine2Falcon1plusDovetail_9028:HG2_PB_HySA_9374:HG2_Ill_scalpel_4944:HG2_Ill_manta_1415:HG2_Ill_SVrefine2DISCOVARplusDovetail_9846:HG2_Ill_GATKHCSBGrefine_3403:HG2_10X_allpass_819:HG2_10X_SVrefine210Xhap12_3663:HG2_Ill_breakscan11_698:HG4_Ill_MetaSV_3923:HG3_Ill_MetaSV_3918:HG2_Ill_tnscope_559;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3663:HG2_10X_allpass_819:HG2_Ill_GATKHCSBGrefine_3403:HG2_Ill_SVrefine2DISCOVARplusDovetail_9846:HG2_Ill_manta_1415:HG2_Ill_scalpel_4944:HG2_PB_HySA_9374:HG2_PB_SVrefine2Falcon1plusDovetail_9028:HG2_PB_SVrefine2Falcon2Bionano_2402:HG2_PB_SVrefine2PB10Xhap12_3623:HG2_PB_SVrefine2PBcRplusDovetail_8397:HG2_PB_pbsv_4977:HG3_10X_allpass_1001:HG3_Ill_GATKHCSBGrefine_3380:HG3_Ill_SVrefine2DISCOVARDovetail_3865:HG3_Ill_manta_1161:HG3_Ill_scalpel_5029:HG3_PB_SVrefine2Falcon1Dovetail_3080:HG3_PB_SVrefine2PBcRDovetail_2271:HG4_10X_allpass_965:HG4_Ill_GATKHCSBGrefine_3555:HG4_Ill_SVrefine2DISCOVARDovetail_3822:HG4_Ill_manta_1254:HG4_Ill_scalpel_4854:HG4_PB_SVrefine2Falcon1Dovetail_3034:HG4_PB_SVrefine2PBcRDovetail_2539;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0788644;ClusterMaxSizeDiff=0.0788644;ClusterMaxEditDist=0.0788644;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=-566;DistForward=-310;DistMin=-566;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:150951028-150951362;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2950.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:86:1/1:1:48:0:16:./.:0:0:0:0:1/1:0:53:./.:2:17:.:.:.
chr4	151192546	HG2_10X_SVrefine210Xhap12_3665	AAGCCAGGGAGCCAAGTGGTCTGGCTCGGTGGGTCCCACTCCCATGGAGCCCAGCAAGCTAAGATCCACTGGCTTGAAATTCTTGCTGCCAGCACAGCAGTCTGAAGTTGACCTGGGACACTCAAGCTTGGTGGGGGGAGGAGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3665:HG3_PB_pbsv_4844:HG2_PB_pbsv_4981:HG3_PB_SVrefine2PBcRDovetail_2273:HG3_Ill_SVrefine2DISCOVARDovetail_3868:HG2_PB_HySA_9391;NumClusterSVs=6;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3665:HG3_PB_SVrefine2PBcRDovetail_2273:HG3_Ill_SVrefine2DISCOVARDovetail_3868:HG2_PB_HySA_9391;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0210526;ClusterMaxSizeDiff=0.0210526;ClusterMaxEditDist=0.028169;PBcalls=4;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-143;DistBack=5297;DistForward=51443;DistMin=5297;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=143;REFWIDENED=4:151192547-151192832;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.993;PctRecOverlap=0.0208;SizeDiff=1;StartDistance=-141;EndDistance=-140;GTMatch=0;TruScore=67;MatchId=2951.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:33:0|1:20:1:1:21:./.:0:0:0:0:0/1:18:7:./.:.:.:.:.:.
chr4	152311186	HG4_Ill_SVrefine2DISCOVARDovetail_3830	TCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_4989:HG2_PB_assemblyticsPBcR_19571:HG4_PB_assemblyticsfalcon_19759:HG2_PB_assemblyticsfalcon_20227:HG4_PB_pbsv_5023:HG4_Ill_svaba_6559:HG4_Ill_SVrefine2DISCOVARDovetail_3830:HG3_Ill_svaba_6549:HG2_Ill_svaba_6440;NumClusterSVs=9;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_3830:HG4_Ill_svaba_6559;NumExactMatchSVs=2;ClusterMaxShiftDist=0.301676;ClusterMaxSizeDiff=0.301676;ClusterMaxEditDist=0.301676;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-102;DistBack=-61;DistForward=-100;DistMin=-100;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=43;REFWIDENED=4:152311187-152311331;PctSeqSimilarity=0.8677;PctSizeSimilarity=0.7549;PctRecOverlap=0.4466;SizeDiff=25;StartDistance=-57;EndDistance=-32;GTMatch=0;TruScore=68;MatchId=2953.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:24:0|1:19:5:2:18:./.:0:0:0:0:./.:7:0:./.:.:.:.:.:.
chr4	152340705	HG4_PB_SVrefine2Falcon1Dovetail_3040	GGTCTGTTCCTCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGCTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGT	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_560:HG2_10X_allpass_820:HG4_Ill_Krunchall_7465:HG2_Ill_Krunchall_7201:HG4_PB_assemblyticsfalcon_19760:HG2_PB_assemblyticsfalcon_20228:HG2_Ill_breakscan11_699:HG4_PB_pbsv_5024:HG4_PB_SVrefine2PBcRDovetail_2543:HG4_PB_SVrefine2Falcon1Dovetail_3040:HG4_Ill_manta_1256:HG4_Ill_SVrefine2DISCOVARDovetail_3831:HG4_Ill_MetaSV_3925:HG4_Ill_GATKHCSBGrefine_3560:HG4_10X_allpass_966:HG2_PB_pbsv_4991:HG2_PB_SVrefine2PBcRplusDovetail_8406:HG2_PB_SVrefine2PB10Xhap12_3633:HG2_PB_SVrefine2Falcon1plusDovetail_9037:HG2_PB_HySA_9405:HG2_Ill_manta_1420:HG2_Ill_SVrefine2DISCOVARplusDovetail_9854:HG2_Ill_MetaSV_3743:HG2_Ill_GATKHCSBGrefine_3410:HG2_10X_SVrefine210Xhap12_3668;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3668:HG2_Ill_GATKHCSBGrefine_3410:HG2_Ill_MetaSV_3743:HG2_Ill_SVrefine2DISCOVARplusDovetail_9854:HG2_Ill_manta_1420:HG2_PB_HySA_9405:HG2_PB_SVrefine2Falcon1plusDovetail_9037:HG2_PB_SVrefine2PB10Xhap12_3633:HG2_PB_SVrefine2PBcRplusDovetail_8406:HG2_PB_pbsv_4991:HG4_10X_allpass_966:HG4_Ill_GATKHCSBGrefine_3560:HG4_Ill_MetaSV_3925:HG4_Ill_SVrefine2DISCOVARDovetail_3831:HG4_Ill_manta_1256:HG4_PB_SVrefine2Falcon1Dovetail_3040:HG4_PB_SVrefine2PBcRDovetail_2543:HG4_PB_pbsv_5024;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0392857;ClusterMaxSizeDiff=0.0392857;ClusterMaxEditDist=0.0392857;PBcalls=10;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-847;DistBack=-26;DistForward=-820;DistMin=-820;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=4:152340706-152341569;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2954.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:35:0|1:28:0:1:25:./.:0:0:0:0:0/1:35:14:0/1:76:19:.:.:.
chr4	152778524	HG3_Ill_GATKHCSBGrefine_3387	AATCTGCTATGTGGGTCTAGTTCTTCTCTTGTGTCTGGATAAAAACTCAGGCAGGTTTTTTCTAGTCACAGCATTCTCCAATCAATAATTTAAAAATCCAGTCTCATGTAACAGATAATACTTTGGACTTGGTTCAATGTTGTTTTCCCTTCCTTTCCTGATCGTGACCTGTTGCGAGTGGAGTCTGGCAGCTGGGAGCAGGACTACACACTCACTTTCACTTTTCTTCACCTCGTGCTTCCCATCTCCCTCCTCCATCTCATTAACTGTGATTTCTGGCCCCTATTCAGCGGATCATAGGAAGGGAGAAAAGATAACATTGGCCAGAAAAGTTTTATCTTGCCTGGTACTATTGTGAGCTTGGTGTGGCCCTCTCTGGGCTTGGGAAGTGTTTAAAGCTGACTTGTTCTCATCTGTATCCTGTGGGGTTTTAGGACATTCCCATCACCAGAGACCTTTCTCTTACCTG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_4853:HG2_10X_allpass_821:HG2_PB_pbsv_4994:HG3_Ill_MetaSV_3919:HG2_Ill_tnscope_561:HG3_PB_SVrefine2PBcRDovetail_2277:HG3_Ill_manta_1164:HG3_Ill_SVrefine2DISCOVARDovetail_3875:HG3_Ill_GATKHCSBGrefine_3387:HG3_10X_allpass_1004:HG2_PB_assemblyticsfalcon_20233:HG2_PB_SVrefine2Falcon1plusDovetail_9039:HG2_Ill_manta_1421:HG2_Ill_breakscan11_700:HG2_Ill_SpiralSDKrefine_12828:HG2_Ill_GATKHCSBGrefine_3411:HG2_10X_SVrefine210Xhap12_3670:HG3_Ill_Krunchall_7067:HG2_Ill_Krunchall_7203:HG3_Ill_Spiral_5534:HG2_Ill_Spiral_364;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3670:HG2_Ill_GATKHCSBGrefine_3411:HG2_Ill_SpiralSDKrefine_12828:HG2_Ill_breakscan11_700:HG2_Ill_manta_1421:HG2_PB_SVrefine2Falcon1plusDovetail_9039:HG2_PB_assemblyticsfalcon_20233:HG3_10X_allpass_1004:HG3_Ill_GATKHCSBGrefine_3387:HG3_Ill_SVrefine2DISCOVARDovetail_3875:HG3_Ill_manta_1164:HG3_PB_SVrefine2PBcRDovetail_2277;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0106952;ClusterMaxSizeDiff=0.0106952;ClusterMaxEditDist=0.0128342;PBcalls=5;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-468;DistBack=-469;DistForward=45430;DistMin=-469;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:152778525-152778992;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2955.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:34:0|1:41:0:0:31:./.:0:0:0:0:0/1:54:19:0/1:51:13:.:.:.
chr4	152990311	HG2_PB_SVrefine2Falcon2Bionano_2412	GCATGTACTATGTCAAGTGTCATGTCTGCTTGCTTATTTTTTGAGGTGACATCAGCTATATCAAGTTCTCTGAATTCAAGTATATTCCAAATGATCTGCTTATTGAGAAACTGAACTATGGTGCTATTCAATAGTTCTCAATATTTGGTGTTCATCAGACTTATCTAAGATGCTTTTTAAAAATGCAGGTGCTAGGCCGAGGCAGGCAGATCATGAGATCAAGAGATCGACACCATCCTGGCCAACATAGTGAAACCCCATCTCCACTAAAAATAAAAAAAATTTAGCCAGGCGTGGTGGCGTGCGCCTGTAGTCCCAGCTACTCAGAGGTTGAGGCAGGAGAATCACCTGCACCTGAGAGATGGAGGTTGCAGTGAGCCGAGATCATGCCACGGCACTCCGGCCTGGGTGACAGAGCGAGACTCAGTCTCAAAAAAAAAAAAAAAAAGCAGGTGCAGAGACCCACCTCAGACCTGTCAAATCTGAGTCTCTGGGGTGGTGGCAGGGAAAACATCTGCGCCTTAACAGGCTTTCCAGCCAATCCTAAAATACAGTCATGTTTGAAAACCACTGGTTAAACTACCTACATGGCTTCAGATAAGCACACATGACCATCATAGGCTTAGATAACACAGTAGCCAGACTCAGAGAGTTAACATGCAGCCATCGGCTAGAGATTATACGTATAGACTAAGTACATCATTGTATTTGCAGTACACAGACTGATCTTGGACTTTGTCCACAGGAGTATGATGAACAGAAGGACCAAAAGGATTTTGATTACGGCACTGTTTGCCACTACAAAACCACAAAATGGCTTTTCTCTCCACCCTTATATACATGCCAGGGGAAAAGGACATGATCGTCACTGGGACTTTCTCAGAGACCTTCAGGTAGTAGGTTCTATTAAAACTTGAGGAAGGTCTCGGGGGTCAACTTCTGGGGAACCTAGAATGCGGCAAGAAGAATGCAATTCACCAACCCCAATCCTCATCTTCCAGGAAGGCTTCCTAAGCCAACTTGCAGTCTTCTTGCATGCGGGTGGGCCCATAAAATTAGTTCCCACAAATGGAATGTGAGAGGAAGTGTGGCCTATTATCTGGGTGGTGGGAGCAAGGTTGCCTTCTTCATGTGATCTCTCTTCTCTCATCTTCTGGTTACAGAGAATACAGTAAAGAACTCTCTCAGCCTCAAAGGGAATGTCAGAGACTTGAGTGGAAGGAGCCTGGGTCCCTAAGTGGCTCAATGGAGCAGAGCCCATCCCTCACCTCCCCCAGCCTCCAACTTCATTGGGCTGTGATGTCAGTGAGGTTAGAGAAAAGTAAATTCTGGTGGGGAAGGGGAGTAAAGCTGCCTGGGCTTTGGGGTCATTTGTCACAGCAGGTAGCCTGCCCTGCCTAGCACAGACAGATGCATGCCTTATCCTCTTCCCAGATGTCCACCTGGCTCCAGGTGCAATCTCATGACCGGAAGGATACATTTTTACTGTCTTACACCTACACTCTTCCCCGTCCTTTTTCAGCACTTAGGAATCAACTCTTTCCTCTTCCTCCTGGCTCTTTGGGACCTACTCTAGTTTTCTAGTCTGCCATTAAATTTTTCCTGGAAAATGTTTACCACAATTAAGCATCAATACAAAGCCTATTTGTCCTCTACTCCTCTGCTGACATTTTAGTTCAATATATAATCAAAAGGGAAGAAAGCAAAGGGCAAAGTCCTCTGATGTGAGTTTCCAACATCTGGTGCCCCAAGGTACGTAAAGGTAGAAGGCAGCTGAAAGCTGACAGTCTCCTCAGGGTTGCCCTGTCATCCGTCATCCGCAGAATCCATCTTCAGCCCCCAGGTGGGCTTAAAGGAAGTCTCCGAGGCCAGATGTGTACCAGCAGCTGCTGGTGGAAATTGCATTTGGGAAGGCTGTTCTTCTGTTAACCCCAAACACTGTCTTCTCTGGAGCTTTTGGGTGTGCTGTCACATCAGGTGTAGCGGAAGGGAACACACTTGGTGGGCAGAGAGGGCAGGGAGAAATGCTTCAGGTTCCCACCACTTATAAGCTGTGTGATATCCGGTGACTTTATTAACCTTTCTGGGCCTTAGTTACTGGATCCATAAAGTAGGAATGGCATTAGTAGCTACCTCCTAGTTCTGTTATGAGGATTAAATGAAACAATACTTGCAAAAGGCTTAGTGCCTGGCACCTAACAACTGTCAGTAAATGTGAGCAATCGTGGTGGCAATTGTGCTTGTGGTTGTTGTTATTAGAATATCTGGTTTCTTCTGCTCCTGAGTTTCTGGTGATTGTCCAGCTCTTCTACAGGAACTCCATGCCCCCCCAAGTATGCTGAACTACAGTTTTCTTGATTTTAGAGATAGAAGGGATGATCTTCGCAAAAACCTCATTGTAAAGGTAAATAAAGGGCCTACAGTCTAGGGCTGTGAAAAGACATGCTTTTGGTCTCTCAGTGGTTCCACTGCAGTCAGCCCTAGAACCGAGGCTTCTCCTCCAATATCCTTCCTGCCTCCCCACTCTTCCAGTGGGCTTTTCCTACAACCCTCAGGTTCTGAAACTGGACTCCCTGGGTTCAAATCCTGGTCCTGCCAATTCCCAACAGTGTAGTCATAGGAAAGGTCCTTAACCTCAGTGTGCCCCAGTGTGACCTTGACTACAAAGTGGGGAGAACAATTGTCCCGGCCTAGGATGGGCATTAAGAGGACAGAGTGAACTGTGTCTGAGTGTGGGAACCAGGCCTGGCCACCCAGGCCCATGATATTCCACTGAGCCACCCCTGCCTCTCAGATGGGACAAAGTTCAGGACACATTAGCCCCCAGCTCTGCTGACTTGGTGTGTTCCGTGGGCCAGGGCTGACCCATCAGCCTCATCGTCTTTAGCATTTCTAGCAAGTGTTCCCTAGCAGCTCTGCTGAGTGGCATGGCCTAATCCTGCCTGCCAGCTTTACAAAATCAATCTCAAACCACTTCAGGAGGGCGACCAGCCAGGATTTAGCAGTCACTTCTAATGGACGAGAAAATGGAGCCCCGTGTCCCCTGGTGTGTGCTGAGTCAGTGACACAGCACCGCTTGGGAGCCAGGGGCCACTCCTAGGAACGCCACTCCCCCCACACAACTCTGGCCTCACACTTCCAAGCTTGGATGCCCCTGGTGAGCTCAGGCCCAGAATCCCACACTAGAACTCCCAGGACCTCAAGCTGCTGTGACTGTCACAGATGGAATGTGCTGCATTCAAAAACCTGCAATGGAGTCCACAGAACTCCCTGTCAGCAGAAAATCCTCCCTCGCTGCAAAGAACAAGGTGGCTGTGGGGTGACTGGAGGTGAGAGGGAAAAAATCCTCCCACAAACACTGTTAATCCCTATTTGATAGAGAGAAGAGGAAAGGACTCTCATGGTAAGACACATCAATTAGATTCCCATCCTTGCCCCTGGAAACCTCTGGGAACTGAATGTGATCCTTGGGAAAGGCAGATTGGAGGGGTCTTAGCAAACTTGCTCGAATCATTAAAGCAATCACAAGTGGGCACTGGGCTGGAGGTTCCCAAAGAGGAAACCACAGGCCCCAATTCTCCTTGCTCCTGCCTCAGCCCTACTTCCTAACCTCCTCTTCTCCAACAGTGAGCTGCC	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3745:HG2_10X_allpass_822:HG3_Ill_Krunchall_7070:HG2_Ill_Krunchall_7206:HG2_PB_assemblyticsPBcR_19579:HG3_10X_allpass_1005:HG2_Ill_tnscope_562:HG3_PB_pbsv_4854:HG3_PB_SVrefine2PBcRDovetail_2278:HG3_Ill_SVrefine2DISCOVARDovetail_3877:HG3_Ill_MetaSV_3920:HG2_PB_pbsv_4995:HG2_PB_SVrefine2PBcRplusDovetail_8407:HG2_PB_SVrefine2PB10Xhap12_3635:HG2_PB_SVrefine2Falcon2Bionano_2412:HG2_PB_SVrefine2Falcon1plusDovetail_9040:HG2_Ill_breakscan11_701:HG2_Ill_SpiralSDKrefine_12831:HG2_Ill_SVrefine2DISCOVARplusDovetail_9857:HG2_10X_SVrefine210Xhap12_3671;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3671:HG2_Ill_SVrefine2DISCOVARplusDovetail_9857:HG2_Ill_SpiralSDKrefine_12831:HG2_Ill_breakscan11_701:HG2_PB_SVrefine2Falcon1plusDovetail_9040:HG2_PB_SVrefine2Falcon2Bionano_2412:HG2_PB_SVrefine2PB10Xhap12_3635:HG2_PB_SVrefine2PBcRplusDovetail_8407:HG2_PB_pbsv_4995:HG3_Ill_MetaSV_3920:HG3_Ill_SVrefine2DISCOVARDovetail_3877:HG3_PB_SVrefine2PBcRDovetail_2278:HG3_PB_pbsv_4854;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0129103;ClusterMaxSizeDiff=0.0129103;ClusterMaxEditDist=0.0129103;PBcalls=8;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-3635;DistBack=48882;DistForward=-3633;DistMin=-3633;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=4:152990312-152993949;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2956.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:71:./.:31:9:14:29:./.:0:0:0:0:0/1:45:21:0/1:271:145:3850:.:.
chr4	153649474	HG2_Ill_SpiralSDKrefine_12834	GAGAAGGAATTAATGACTTGGAAAGACCAAAGGAGCAGCCCAGAGGGACCTGAGA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_5026:HG2_PB_pbsv_4996:HG4_PB_HySA_7501:HG3_PB_HySA_7721:HG2_PB_HySA_9417:HG4_PB_assemblyticsfalcon_19764:HG4_Ill_svaba_6563:HG4_Ill_manta_1257:HG4_Ill_Krunchall_7477:HG4_Ill_GATKHC_8474:HG4_Ill_GATKHCSBGrefine_3561:HG4_Ill_250bpfermikitraw_7075:HG4_Ill_150bpfermikitraw_6779:HG3_PB_assemblyticsfalcon_20159:HG3_Ill_svaba_6553:HG3_Ill_manta_1165:HG3_Ill_Krunchall_7074:HG3_Ill_GATKHC_8409:HG3_Ill_GATKHCSBGrefine_3388:HG3_Ill_250bpfermikitraw_6798:HG3_Ill_150bpfermikitraw_6631:HG2_PB_assemblyticsfalcon_20240:HG2_PB_assemblyticsPBcR_19583:HG2_Ill_svaba_6444:HG2_Ill_manta_1422:HG2_Ill_SpiralSDKrefine_12834:HG2_Ill_Krunchall_7209:HG2_Ill_GATKHC_8417:HG2_Ill_GATKHCSBGrefine_3412:HG2_Ill_250bpfermikitraw_7037:HG2_Ill_150bpfermikitraw_6565:HG3_PB_pbsv_4855;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6565:HG2_Ill_250bpfermikitraw_7037:HG2_Ill_GATKHCSBGrefine_3412:HG2_Ill_GATKHC_8417:HG2_Ill_Krunchall_7209:HG2_Ill_SpiralSDKrefine_12834:HG2_Ill_manta_1422:HG2_Ill_svaba_6444:HG2_PB_assemblyticsPBcR_19583:HG2_PB_assemblyticsfalcon_20240:HG3_Ill_150bpfermikitraw_6631:HG3_Ill_250bpfermikitraw_6798:HG3_Ill_GATKHCSBGrefine_3388:HG3_Ill_GATKHC_8409:HG3_Ill_Krunchall_7074:HG3_Ill_manta_1165:HG3_Ill_svaba_6553:HG3_PB_assemblyticsfalcon_20159:HG4_Ill_150bpfermikitraw_6779:HG4_Ill_250bpfermikitraw_7075:HG4_Ill_GATKHCSBGrefine_3561:HG4_Ill_GATKHC_8474:HG4_Ill_Krunchall_7477:HG4_Ill_manta_1257:HG4_Ill_svaba_6563:HG4_PB_assemblyticsfalcon_19764;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0555556;PBcalls=10;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=41562;DistForward=12977;DistMin=12977;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=328;REFWIDENED=4:153649416-153649797;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2957.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:0:12:1:18:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr4	154646142	HG3_Ill_GATKHC_8423	TGTGGGGGAGCGGGCAGGGGTGAGCTGCGTGGGGGAGCGGGCAGGGGTAGGCTGC	T	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_3415:HG2_Ill_breakscan11_702:HG3_PB_pbsv_4861:HG3_Ill_GATKHC_8423:HG2_PB_pbsv_5002:HG2_PB_assemblyticsPBcR_19590:HG2_Ill_GATKHC_8428;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3415:HG3_Ill_GATKHC_8423:HG2_PB_pbsv_5002:HG2_PB_assemblyticsPBcR_19590:HG2_Ill_GATKHC_8428;NumExactMatchSVs=5;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.0357143;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=28633;DistForward=-16;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=47;REFWIDENED=4:154646141-154646244;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2958.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:48:./.:17:46:21:0:./.:0:0:0:0:./.:1:3:./.:.:.:.:.:.
chr4	155555735	HG2_Ill_GATKHCSBGrefine_3418	ATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_5039:HG4_PB_HySA_7516:HG4_10X_allpass_967:HG4_Ill_Krunchall_7494:HG4_Ill_GATKHC_8500:HG4_Ill_GATKHCSBGrefine_3570:HG4_Ill_250bpfermikitraw_7093:HG4_Ill_150bpfermikitraw_6794:HG2_PB_HySA_9436:HG4_Ill_GATKHC_8499:HG4_Ill_GATKHCSBGrefine_3569:HG2_Ill_Krunchall_7224:HG2_Ill_GATKHC_8437:HG2_Ill_GATKHCSBGrefine_3419:HG2_Ill_250bpfermikitraw_7054:HG2_Ill_150bpfermikitraw_6580:HG3_PB_HySA_7738:HG3_Ill_svaba_6571:HG3_Ill_GATKHC_8434:HG3_Ill_GATKHCSBGrefine_3393:HG2_Ill_svaba_6458:HG2_Ill_manta_1426:HG2_Ill_GATKHC_8436:HG2_Ill_GATKHCSBGrefine_3418:HG2_Ill_250bpfermikitraw_7053:HG2_Ill_150bpfermikitraw_6579:HG3_PB_pbsv_4864:HG2_PB_pbsv_5006;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6579:HG2_Ill_250bpfermikitraw_7053:HG2_Ill_GATKHCSBGrefine_3418:HG2_Ill_GATKHC_8436:HG2_Ill_manta_1426:HG2_Ill_svaba_6458:HG3_Ill_GATKHCSBGrefine_3393:HG3_Ill_GATKHC_8434:HG3_Ill_svaba_6571;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.203704;PBcalls=6;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-55;DistBack=-19;DistForward=11681;DistMin=-19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:155555734-155555792;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9821;PctRecOverlap=0.9825;SizeDiff=-1;StartDistance=0;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=2959.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:0:7:0:9:./.:0:0:0:0:1/1:0:30:./.:.:.:.:.:.
chr4	155803011	HG3_Ill_GATKHC_8438	GACCCTAACTCTGTGGTTACTCTAGTCAGTCATACACAGTGCTAGCTGATAACTCCGTAGCCATTTCATTAAGCCCTGGA	G	20	PASS	ClusterIDs=HG2_Ill_Cortex_6610:HG4_PB_HySA_7518:HG3_PB_HySA_7739:HG2_PB_HySA_9438:HG4_PB_assemblyticsfalcon_19774:HG4_PB_SVrefine2Falcon1Dovetail_3047:HG4_Ill_svaba_6583:HG4_Ill_scalpel_4877:HG4_Ill_manta_1264:HG4_Ill_Krunchall_7497:HG4_Ill_GATKHC_8504:HG4_Ill_GATKHCSBGrefine_3575:HG4_Ill_250bpfermikitraw_7096:HG4_Ill_150bpfermikitraw_6797:HG4_CG_vcfBeta_3376:HG4_10X_allpass_968:HG3_PB_assemblyticsfalcon_20171:HG3_Ill_svaba_6574:HG3_Ill_scalpel_5057:HG3_Ill_manta_1170:HG3_Ill_Krunchall_7093:HG3_Ill_GATKHC_8438:HG3_Ill_GATKHCSBGrefine_3397:HG3_Ill_250bpfermikitraw_6817:HG3_Ill_150bpfermikitraw_6650:HG3_CG_vcfBeta_2885:HG3_10X_allpass_1006:HG2_PB_assemblyticsfalcon_20251:HG2_PB_assemblyticsPBcR_19601:HG2_Ill_svaba_6461:HG2_Ill_scalpel_4973:HG2_Ill_manta_1429:HG2_Ill_SpiralSDKrefine_12850:HG2_Ill_Krunchall_7227:HG2_Ill_GATKHC_8441:HG2_Ill_GATKHCSBGrefine_3424:HG2_Ill_250bpfermikitraw_7057:HG2_Ill_150bpfermikitraw_6583:HG2_CG_vcfBeta_2996:HG2_10X_allpass_823:HG4_Ill_Spiral_413:HG3_Ill_Spiral_5552:HG2_Ill_Spiral_365:HG3_PB_pbsv_4867:HG4_PB_pbsv_5043:HG2_PB_pbsv_5010:HG4_Ill_Cortex_2780:HG3_Ill_Cortex_2787;NumClusterSVs=48;ExactMatchIDs=HG2_10X_allpass_823:HG2_CG_vcfBeta_2996:HG2_Ill_150bpfermikitraw_6583:HG2_Ill_250bpfermikitraw_7057:HG2_Ill_GATKHCSBGrefine_3424:HG2_Ill_GATKHC_8441:HG2_Ill_Krunchall_7227:HG2_Ill_SpiralSDKrefine_12850:HG2_Ill_manta_1429:HG2_Ill_scalpel_4973:HG2_Ill_svaba_6461:HG2_PB_assemblyticsPBcR_19601:HG2_PB_assemblyticsfalcon_20251:HG3_10X_allpass_1006:HG3_CG_vcfBeta_2885:HG3_Ill_150bpfermikitraw_6650:HG3_Ill_250bpfermikitraw_6817:HG3_Ill_GATKHCSBGrefine_3397:HG3_Ill_GATKHC_8438:HG3_Ill_Krunchall_7093:HG3_Ill_manta_1170:HG3_Ill_scalpel_5057:HG3_Ill_svaba_6574:HG3_PB_assemblyticsfalcon_20171:HG4_10X_allpass_968:HG4_CG_vcfBeta_3376:HG4_Ill_150bpfermikitraw_6797:HG4_Ill_250bpfermikitraw_7096:HG4_Ill_GATKHCSBGrefine_3575:HG4_Ill_GATKHC_8504:HG4_Ill_Krunchall_7497:HG4_Ill_manta_1264:HG4_Ill_scalpel_4877:HG4_Ill_svaba_6583:HG4_PB_SVrefine2Falcon1Dovetail_3047:HG4_PB_assemblyticsfalcon_19774;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0125;ClusterMaxSizeDiff=0.0124224;ClusterMaxEditDist=0.0496894;PBcalls=11;Illcalls=31;TenXcalls=3;CGcalls=3;PBexactcalls=5;Illexactcalls=25;TenXexactcalls=3;CGexactcalls=3;HG2count=17;HG3count=15;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-79;DistBack=31577;DistForward=25456;DistMin=25456;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:155803010-155803091;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2960.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:74:1/1:2:28:2:38:./.:0:0:0:0:1/1:0:44:./.:.:.:.:.:.
chr4	156249275	HG2_PB_SVrefine2Falcon1plusDovetail_9045	ACACTCCAACTTTCCTCCCACCATGGAATTTGGTTAAAGATTATCCTAATTTTGAATTACTTCCAAGATTATTTTCTTAAAAAATAGTGCTTATTTTCTTTTATAGTAATTGTAATTTTGGGCAAATTTTGTCTGGCATTTACGGGTATATATTGGTATACACTGACAAAATTCATAAATGACTGCGTACCAATTTTGGATGGGATACTCAGTTATACATTTTGCTGGAATTTGTGAAATAATTTCACAAGAAGTTTTCCTTGATAAACAACACTGGAAAGGAAATTTGCAAAATTCACTGCATCATATATGTATGTATATATATATGTGTATATATATATATGTGTGTGTATATATATATGTATATATATACACACATACATACATATACCACTCTATGT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_5011:HG3_Ill_GATKHCSBGrefine_3399:HG2_Ill_GATKHCSBGrefine_3426:HG2_10X_allpass_824:HG2_Ill_tnscope_563:HG3_PB_assemblyticsfalcon_20173:HG3_PB_SVrefine2PBcRDovetail_2281:HG3_PB_SVrefine2Falcon1Dovetail_3092:HG3_Ill_manta_1171:HG2_PB_assemblyticsfalcon_20252:HG2_PB_SVrefine2PB10Xhap12_3643:HG2_PB_SVrefine2Falcon2Bionano_2421:HG2_PB_SVrefine2Falcon1plusDovetail_9045:HG2_Ill_manta_1430:HG2_10X_SVrefine210Xhap12_3680:HG2_Ill_SpiralSDKrefine_12855:HG2_Ill_breakscan11_703:HG3_Ill_MetaSV_3924:HG2_Ill_MetaSV_3750:HG3_Ill_Spiral_5556:HG2_Ill_Spiral_366:HG3_10X_allpass_1007:HG2_Ill_Krunchall_7234:HG3_PB_pbsv_4868;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3680:HG2_Ill_manta_1430:HG2_PB_SVrefine2Falcon1plusDovetail_9045:HG2_PB_SVrefine2Falcon2Bionano_2421:HG2_PB_SVrefine2PB10Xhap12_3643:HG2_PB_assemblyticsfalcon_20252:HG3_Ill_manta_1171:HG3_PB_SVrefine2Falcon1Dovetail_3092:HG3_PB_SVrefine2PBcRDovetail_2281:HG3_PB_assemblyticsfalcon_20173;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0666667;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.0666667;PBcalls=9;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-400;DistBack=-24;DistForward=20723;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:156249275-156249675;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9975;PctRecOverlap=0.995;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2961.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:33:./.:18:14:19:12:./.:0:0:0:0:0/1:56:26:0/1:34:6:.:.:.
chr4	157002032	HG2_PB_SVrefine2Falcon1plusDovetail_9051	TACCTATTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3685:HG4_PB_assemblyticsfalcon_19787:HG3_PB_assemblyticsfalcon_20182:HG2_PB_assemblyticsfalcon_20265:HG2_PB_assemblyticsPBcR_19614:HG4_Ill_Krunchall_7513:HG3_Ill_Krunchall_7101:HG2_Ill_Krunchall_7245:HG4_PB_pbsv_5050:HG3_PB_pbsv_4873:HG2_PB_HySA_9452:HG4_Ill_MetaSV_3931:HG3_Ill_MetaSV_3927:HG2_Ill_tnscope_564:HG2_Ill_MetaSV_3754:HG4_PB_SVrefine2PBcRDovetail_2555:HG4_PB_SVrefine2Falcon1Dovetail_3054:HG4_Ill_svaba_6595:HG4_Ill_scalpel_4891:HG4_Ill_manta_1267:HG4_Ill_SVrefine2DISCOVARDovetail_3853:HG4_Ill_GATKHCSBGrefine_3581:HG4_10X_allpass_970:HG3_PB_SVrefine2PBcRDovetail_2286:HG3_PB_SVrefine2Falcon1Dovetail_3098:HG3_Ill_svaba_6582:HG3_Ill_scalpel_5066:HG3_Ill_manta_1173:HG3_Ill_SVrefine2DISCOVARDovetail_3896:HG3_Ill_GATKHCSBGrefine_3403:HG3_10X_allpass_1009:HG2_PB_pbsv_5018:HG2_PB_SVrefine2PBcRplusDovetail_8418:HG2_PB_SVrefine2PB10Xhap12_3649:HG2_PB_SVrefine2Falcon2Bionano_2428:HG2_PB_SVrefine2Falcon1plusDovetail_9051:HG2_Ill_svaba_6474:HG2_Ill_scalpel_4985:HG2_Ill_manta_1433:HG2_Ill_breakscan11_704:HG2_Ill_SVrefine2DISCOVARplusDovetail_9876:HG2_Ill_GATKHCSBGrefine_3430:HG2_10X_allpass_825;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3685:HG4_PB_SVrefine2PBcRDovetail_2555:HG4_PB_SVrefine2Falcon1Dovetail_3054:HG4_Ill_svaba_6595:HG4_Ill_scalpel_4891:HG4_Ill_manta_1267:HG4_Ill_SVrefine2DISCOVARDovetail_3853:HG4_Ill_GATKHCSBGrefine_3581:HG4_10X_allpass_970:HG3_PB_SVrefine2PBcRDovetail_2286:HG3_PB_SVrefine2Falcon1Dovetail_3098:HG3_Ill_svaba_6582:HG3_Ill_scalpel_5066:HG3_Ill_manta_1173:HG3_Ill_SVrefine2DISCOVARDovetail_3896:HG3_Ill_GATKHCSBGrefine_3403:HG3_10X_allpass_1009:HG2_PB_pbsv_5018:HG2_PB_SVrefine2PBcRplusDovetail_8418:HG2_PB_SVrefine2PB10Xhap12_3649:HG2_PB_SVrefine2Falcon2Bionano_2428:HG2_PB_SVrefine2Falcon1plusDovetail_9051:HG2_Ill_svaba_6474:HG2_Ill_scalpel_4985:HG2_Ill_manta_1433:HG2_Ill_breakscan11_704:HG2_Ill_SVrefine2DISCOVARplusDovetail_9876:HG2_Ill_GATKHCSBGrefine_3430:HG2_10X_allpass_825;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0883797;ClusterMaxSizeDiff=0.0883797;ClusterMaxEditDist=0.0883797;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=45211;DistForward=11754;DistMin=11754;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:157002033-157002357;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2962.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:72:1/1:4:30:2:30:./.:0:0:0:0:1/1:0:36:./.:1:11:.:.:.
chr4	157977525	HG3_Ill_SVrefine2DISCOVARDovetail_3908	GTTAGATTTCCACATTTTCTTTTTATTGTTGCTGAGAATTGCCATCTTTCACTTTTATGTTACCCATTTGATGTTGCGTGTTGCTACTTTTCCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3692:HG2_Ill_SpiralSDKrefine_12870:HG4_PB_assemblyticsfalcon_19802:HG4_PB_SVrefine2Falcon1Dovetail_3065:HG3_PB_SVrefine2PBcRDovetail_2294:HG3_PB_SVrefine2Falcon1Dovetail_3104:HG3_Ill_SVrefine2DISCOVARDovetail_3908:HG2_PB_assemblyticsfalcon_20278:HG2_PB_assemblyticsPBcR_19624:HG2_PB_SVrefine2PBcRplusDovetail_8424:HG2_PB_SVrefine2PB10Xhap12_3656:HG2_PB_SVrefine2Falcon1plusDovetail_9058:HG2_Ill_SVrefine2DISCOVARplusDovetail_9882:HG2_10X_SVrefine210Xhap12_3693:HG3_Ill_Spiral_5570:HG2_Ill_Spiral_369:HG3_PB_assemblyticsfalcon_20197:HG4_Ill_manta_1269:HG3_Ill_manta_1175:HG2_Ill_manta_1437:HG4_Ill_Spiral_418:HG3_PB_pbsv_4884:HG3_PB_HySA_7762:HG2_PB_HySA_9470:HG4_PB_HySA_7537:HG4_Ill_Krunchall_7523:HG4_Ill_250bpfermikitraw_7121:HG4_Ill_150bpfermikitraw_6823:HG3_Ill_Krunchall_7112:HG3_Ill_250bpfermikitraw_6837:HG3_Ill_150bpfermikitraw_6669:HG3_10X_allpass_1010:HG2_Ill_Krunchall_7254:HG2_Ill_250bpfermikitraw_7082:HG4_PB_pbsv_5059:HG4_PB_SVrefine2PBcRDovetail_2562:HG4_Ill_SVrefine2DISCOVARDovetail_3866:HG4_Ill_GATKHC_8534:HG4_Ill_GATKHCSBGrefine_3592:HG3_Ill_GATKHC_8463:HG3_Ill_GATKHCSBGrefine_3413:HG2_PB_pbsv_5027:HG2_PB_SVrefine2Falcon2Bionano_2433:HG2_Ill_GATKHC_8469:HG2_Ill_GATKHCSBGrefine_3439;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3693:HG2_Ill_SVrefine2DISCOVARplusDovetail_9882:HG2_PB_SVrefine2Falcon1plusDovetail_9058:HG2_PB_SVrefine2PB10Xhap12_3656:HG2_PB_SVrefine2PBcRplusDovetail_8424:HG2_PB_assemblyticsPBcR_19624:HG2_PB_assemblyticsfalcon_20278:HG3_Ill_SVrefine2DISCOVARDovetail_3908:HG3_PB_SVrefine2Falcon1Dovetail_3104:HG3_PB_SVrefine2PBcRDovetail_2294:HG4_PB_SVrefine2Falcon1Dovetail_3065:HG4_PB_assemblyticsfalcon_19802;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0425532;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.0740741;PBcalls=18;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-94;DistBack=22929;DistForward=38104;DistMin=22929;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=87;REFWIDENED=4:157977438-157977618;PctSeqSimilarity=0.9946;PctSizeSimilarity=1;PctRecOverlap=0.5684;SizeDiff=0;StartDistance=41;EndDistance=41;GTMatch=0;TruScore=85;MatchId=2964.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:68:1/1:1:31:3:22:./.:0:0:0:0:1/1:1:48:./.:.:.:.:.:.
chr4	159393249	HG4_PB_SVrefine2Falcon1Dovetail_3071	TTTTTTTTCTTTTATTATTATACTGTAAGTTTTAGAGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGTGCTGCACCCACTAACTCATCATCTAGCATTAGGTATATCTCCCAATGCTACCCCTCCCCACTACCCCCACCCCACAACAGTCCCCAGAGTGTGATGTTCCCCTTCCTGTGTCCATGTGATCTCACTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCATGTCTTTACAAAGGACATGAACTCATCATTTCTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTTTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATATGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACGCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTGTTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTATGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTCATGGTAGTTTCTTTGGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAAAGCCTAGGTTTTCTTCTAGGGTTTTTCTGGTTTTAGGTCTAACGTTTAAGTCTTTAATCCATCTTGAATTGATTTTTTTTTTTATTTTACAGTTTTATTGAAGTATAATGTATTTACAATAAGCCTCTCATTTTATAGAGTACAATTTTGTTTTGACATATGCATATACCCATGAAAGCATCAGCAAATAGATAATTATCATATTCTTCACCCCCAAAGACTTCCTTGTGCCTCTTTGTATCCTCTCTCTC	T	20	PASS	ClusterIDs=HG4_10X_allpass_972:HG3_PB_pbsv_4897:HG2_Ill_SpiralSDKrefine_12885:HG2_PB_HySA_9494:HG4_PB_pbsv_5065:HG2_PB_HySA_9493:HG3_PB_pbsv_4896:HG2_PB_pbsv_5036:HG4_PB_HySA_7562:HG3_PB_SVrefine2Falcon1Dovetail_3111:HG4_PB_SVrefine2PBcRDovetail_2567:HG4_PB_SVrefine2Falcon1Dovetail_3071:HG3_PB_SVrefine2PBcRDovetail_2302:HG2_PB_SVrefine2PB10Xhap12_3662:HG2_PB_SVrefine2Falcon1plusDovetail_9064;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9064:HG2_PB_SVrefine2PB10Xhap12_3662:HG3_PB_SVrefine2PBcRDovetail_2302:HG4_PB_SVrefine2Falcon1Dovetail_3071:HG4_PB_SVrefine2PBcRDovetail_2567;NumExactMatchSVs=5;ClusterMaxShiftDist=0.079088;ClusterMaxSizeDiff=0.079088;ClusterMaxEditDist=0.0926256;PBcalls=13;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-1352;DistBack=12928;DistForward=-176;DistMin=-176;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1174;REFWIDENED=4:159393250-159395775;PctSeqSimilarity=0.9635;PctSizeSimilarity=0.9978;PctRecOverlap=0.9187;SizeDiff=3;StartDistance=-110;EndDistance=-107;GTMatch=0;TruScore=95;MatchId=2965.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:5:51:1/1:2:10:0:24:./.:0:0:0:0:./.:23:2:0/1:13:61:1187:.:.
chr4	161110509	HG3_Ill_GATKHCSBGrefine_3430	GAGTATGTGTGAATATATCATATATATTACATATCACACTTATAGTTTACATTTTATATAACAT	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_7108:HG2_PB_pbsv_5042:HG3_PB_pbsv_4905:HG3_Ill_GATKHCSBGrefine_3430:HG3_Ill_250bpfermikitraw_6869:HG2_PB_assemblyticsfalcon_20305:HG2_Ill_GATKHCSBGrefine_3453;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7108:HG3_Ill_GATKHCSBGrefine_3430:HG3_Ill_250bpfermikitraw_6869:HG2_PB_assemblyticsfalcon_20305:HG2_Ill_GATKHCSBGrefine_3453;NumExactMatchSVs=5;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.08;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-63;DistBack=2894;DistForward=24;DistMin=24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=373;REFWIDENED=4:161110510-161110945;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2966.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:35:./.:19:25:11:5:./.:0:0:0:0:0/1:24:19:./.:.:.:.:.:.
chr4	161879029	HG2_10X_SVrefine210Xhap12_3708	AAATTTCAGTGAGACATTGGAAACTCTAACAAAAAAGGGCTAAATATGAAATCTGGATAATATACTCTATTATACAAAAAATGTTATCTAGAGGATATCACAGAAAAATAATTCCTTCAAAGAGTTTATAAACAGACTAAAATCCACAACTAAAATAATAAATCAATAGAAATTAATAGGTCAATAATAATGATATAAACTCAAAAACAAAGATGCAGAAGAATGAAGAAAAGAGAAAAGAAAATCTAGGACCTTTGGGAACATATTGCATATATTTGGAATGCCCAACAGAGAAGAAAGGGAAAGAAGTATAGAATAATTATTTGAAGAAATAATGACTATATATTTTTTCAAATTTAATATGAGACAGCAAAGCGCAAATGAAAAAGGTCCAACGAACACCAAGAAAAGAATATTTTTTAAAAATTACATCTTAGTTGAGTTGCTGAAAACTAAATATGAGGAAAATATCTTAAAAGCAATTGAAAGGAAAAAGGAAACTTTACATATAGAGAAACAGATATAAGAATATGACAGATTTTTCCTGTAAAGTTTTGGAAGCCAGAAGTAACTTTCTTCTTTAATGTATTGAAGAATTTCTTTAACATACTGAAAGTAAAAATTTTGAATCTAGAATTCTATATTTATCTAAAATATCTTTTTCAAAAGACATAGAAAAATATGGGCTTTATTCAGAGAACAAAAGCTGAGAGATTCCATTGTCAGCAGACCTGCAATGCAAAGTGACTTAAACAATGTGGTTTAGGCCAAAGAAAAAAATGATACGTGACGAAAATGTGGACCTATGCAAAGAAATGAAGAAAGCTACGTCTGAGGTCAAAATAAGGGAAGATATAAAATACCATTTATTGTATTTCTTGTATCTTTAAGTGATAATACACTGTCTGAAGTATAATAGTAGTGACATATTGTGGGGTTAAAAAACATTTTAATAACGTACTTTGGGAATTATAACATGTGAAAGCAAACCGTATGATAATAATGTCACAAAGAATGAAGGGTGGAAATGGTAGTACAATGTTTTATACTATACTTCAAATGGCATAATATTATTTTTAGATAGGCTGTGATATGTTACAGAGATGTAACACAGAGCAAACACTTAAAAAATAAAATAAATTGATTTAAATACTAATTCACTAGTGGAGATAAAATATAGCAATTAAACCAAAAATATGCAGAAGAGAAAAAAAAGAACAGGTAGTATATTTAATCTCAATAATATTGATAATTAAATTAAATGTTCATGGATTAAAGACCACTTTTAAGAGGCAAAAGTTGTCAAGTTAGATTAGGCAAACAAACAAAAAAAGACCCAGTCCTCAGGAAAACCTTTTTAAATTATTTCGTGTGTGTATTTTTTATGTATATATTTTCTTTTTTGTCTTGTCTGCCAAAAATTACCAGAAACTAGCCTTCATCATTATTAAGTTCATATATGTAACTACGTACATTTAACTCTTTTTAAGTTATACATTCAGGGGGGTACATGTACAGGTTTGTAACATGAATACAGTTTGTATTGGTGAGGTTTGGGCTTCTAGTATGTTCATCATCCTAACATTAAACAGTGTATCCAATAGGTAATTTTTTAACACGACCCCACTTCCTACCCTTTCTCCTCCCCCCTTGTATATTATTTCCATCTTTACAGTCCATGTGTACTCATTGTTGAGCTCCCATTTACAAGGGAGAATTTTGGTAAAAGCAACAAGTTGGAATGTATCTGTTATTATGATTATTTTTCCTAGGAACCGTATCCTTCACTATTATCACTGTGTACCAAATCATAAATAATTTGTTAAAGTGCTTATGAAATTAAGAATAAGTCCTTCTGCATTTTTTGTCAGTTAACGTAGACCAAACTCCCTTGAACATAGTAGCTGTTCAAAAATGGCTATTATACATTATTAGTCTTGGTTTACATTCAAGGAAACTAAAGTTTAATACGTACATAATACCTAAGGTCAAACAATAAAGATGGTATGACTCTGAACTTCTCTTTTTATTAGACCAAAATGTTACTTCACTTGGGTGGAAGGCCAGGTACAGTACAGATTTTAAAATAGAGGCATGATAAAGGTTACAATTTCTAATTTTTTAAAAAGAATGTCTTTCTTAGGACAAGACGAACATTTTTACAAGTGCCAATTGTTTGTCTTATGCCCGTAAATTACTAGAGTTGAACTTAAACAGAGTCATGAAAGTTTTTCTGAAAAGTTAACATTTATAAGTAGTAAATAGTATGAAGTATGATACAGAACATCAAAAATAGGGCAGAATATTCTTCCCAGGTGTGATGGTTAATTTTAAATGTCAACTTGACTGGATTAAGGAGTACTTAGAGAACTGGTAAAGCATTGATTCTGGGTGTGTCTGTGAGAGTGTTTCTAAGGGAGATTGGCATGTGAATCAGTGGATGGATTGGAGACGATCCACCTCCAATGTGGGTGGGCACCATTCAATAGACTAGGGGCCCAGCTAGAAAAAAAAAAAAAAAAAGCAAAGGAAAGGATTTTTTCTCCTTGAGCTGGAACACACTCTTCTTCTCCTGCCCTTGCATATCATGAACCCAGGCTCTTCAGCCTTGAGACTCCAGGAATTACAATAGAACCACTCTCCATGTTCACTCCCACCCCCTGTGGTTTTTAGGCCTTTAGCTTTGGACTGAGTGTTGTACCATTGGTTACCCTTGTTCTAAGGCTTTCTGACTTGGACTGAGCCAAACCACCAGCATCCCAGAGTCTCCAGCTTGGTGATGGCCTGTTTTGGGACTTCTCTGCCACCACGATCATGTGACCCAATTTCCCTAACAAATCCCCTCTCATCTATCTCTGTCTCTATCTATCTCTGTCTCTATCTATCTATCTACCTATCAATCATCTATGTATCCTATTGGTTCTTTGTATGTGAGAAACCCTGACTAATATACAAAAAAAAGTGTCTTTATAAGTTCTATATTAAATTACTATACTGATTTACCTCTCTCAATAACCCTCTGCCATTGTTTTGAGAAATAATTTCTTTTACACACTTTTCTATTAATGATAATCTTGCAGCTACTAAATAAATTTAACAGTAGTAATATTTGACTCTTTTCTACTGAATTAGGCTTCACATAGACTCTTTATCCTTTAAAGTATTCTATTTCCAGGATTTCCAATTAGACATTCCAGCCTATGACCACAGCTTTCAATTGTCTTATGTCCCCTCCCATCTCCCCAACACCTAGTGACCTAATGCTGTACCTAAAATGATCTCTGCTTCAAATATCCTGCTTAACAGAATCTAAAACCATTTATTTGATTCTGATACACTCTGAAAATAAACTCTCTTAATTCATTATAAAACCACTTAAAATGTCATTCTCCACATTCTTTCTTCTATTTATCAACTACTTTGCAATTTTCAACTCATTACATTCTAGTTTCCACTTCGCTACATTATTGAAATTAACTTTCTGAGGGTACTCATTTATTTCTTAATTATTTCTACATTGTCCATTCTCAAGGCATTGTGAAAAAAAAGAATGTGATGTCACCAATTAATATAGATCTAAATATTGGGGTTCTGAAGATAGATGGGGAATCTCTTATAAAAAATACTTTTTTTAAAAATGGTGTTTCCAAATGAGTCACTATATAAATAAAATTTTAATTACTATTGAACTAAATGTTTTTTATTACTTATAAGGGGAGAAAAAATAGGTGGTAGTGCAGATTCAATTATCTTTGAGAAGATTCAGAATCAAATGTGTTAAATTTAATTAAAAGGTTAAATAATACATGAATTAAACAAATTCAAAGATACCTAGACATGGTTTAAGTGAATTAAATTTTACCTTGGAGAAATATTTGCCAACAGAGGAGCTAAGGAATATACAAGTAGTTGCCTCAAATGTGCAAATGAATAGATAGATTATACAGTCATCCCTCAGTACACATGGAGTATTGGTTCCAGGACCCCCACATATGCCAAACCTATGCCTACTCAATTCCTAGAGGAAGCCCTGATAAACCTGCATATAAGAAAAGTCTGCCCTCCGTGTCTGTGGGTTTGACATCCCACAAATACTGTCATCACATAAGGTAAATAATACCAAATTTAGGTATGGCAACCAGCAAAAAGAGTAGTCCCTAAGTGTAGTTGTATGCCCTCAGGGGTGAAAAAGATGATCCAATGGAGAAGTGAAAACATTTATTAGAAATTCTATGCTTTTATGTATAAATTTAAAAGAAAATAAGTCCAGCATCCTACATTACAAGTATTAGCAATACAAGATACTTAACAGATACACACATCTGTACCTATCTATACCTATATGTACTGATATCCATATTTATCCAGCAACTATCTTTCTATAAATATAACTTTAGTTTCTTACTAGATAGTGGTTGTCAATATCGTCTTTATTTTCTCATAAACATCAGAGTTTTCTAAAAAATTGCAATTTATCTGTGACTGACACATAGTTATATAATGTTATTATATTATTTGTATATTAGCTTAAAATGATTTCAAAAAATAATTACTAAGAAAATTAAGAATGAAAACCCATTAAGCAAATGAAGACCCCTGCTTCTATAATTTATATACATTCTTTCTGTTAGATCATGGCAGGGGAAAAAATTGTGATTATATATTTGAAATAGAGCAATCAAAATTTAATATTAGAAGAGAGATTATTTTAAACATTTTCATTCTTTGTAATAATTATGGACCTCTCTTCTGGTATATATAGTGTTGAAGTATTTGAGGACATGAAAATCTCATTACTTATTATTGTTATTTTGTGTATGGTTTTAAAGATACATGAAATTTTGCCATAATAACACAGGCATATTAGTTACAAGTGTTTCATATATGTTACTAATGCGGAAAACATTACAAAAATAATATAAAGTGATATAAAAATAGGGGGATCTTTTTGTTTAAAATTATTATTATTGACAAATATATAAGGTTTATTGAGACACACAAAGGCAATAGATAAGAAGGTCAATGAAAGTTTAGCCTCATTCTTCACTGTTGAAAGAACTTGGAACCAGTGAGTAATATAATTACCCATATTGTAGATTTAATTAGCCAACTATATGTTTATATATTATGGAGACTTTCTGGCACTGAAAAGAATGTTTAAATAACTTAATTCAAATTGAATGCCTGTTGTCCTAAATGTATAGCCTGTCATTTATAATGCATGCCAAGCTGAAGGATGGACAATTCAAAAATATCCTGTGTCTATAATAAGAGATTCAACATGAATCCTCTGAATTACAGAGTGGTGAGGCTCACATATTAGGCAAACGGCTGTAATCTATAAGTGAGAGAAGACCCATGTAGTCAAAAGGAAGCATTCATTAAAAGATAAGGAAATGGGGTTATTGAAAGAAAATCATGTCTAGTATTTTTAGCAAGCTCGTAGATTTGTTAGCAAGAATTAGAGCATAGCATGGCAATTCTTATCCAATATCCGCTGCCTTTTCTTCCAATCCTTTCTAGGGCATTAATGTGTCTAGCCAGATAATGATTTACCCAGGCTCCTTGCAGCTAAGCATGGCTATTGTGTTTTAACCAGTGAGATGTAAGTGGAATGATGCTACATAATTTTGGGAAGGCATTTGTATGATAAGTTAGGGCTGGGACAACACTGATTGTTCTAAACCAAAGGCAGGGGAGAATAAAATAAGAATACTTTACCAATAACCATGTTGTATAAAAGGTTATATTTGGGTCTATTGCTGTTCTTATGTTGTTTTTTTTCTGTCTTTTCTTAGAATTAGAATGTATAGCAGTAGCAGACATCAGTATATTCACAAAACAACACAAATGAGAAAGAAAGTCAACATGCTAAGATTGCTGGAGTAGAAAGACAGAAATTGGTTTATTAAAAG	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_566:HG3_10X_allpass_1014:HG2_10X_allpass_826:HG4_10X_allpass_973:HG3_PB_assemblyticsfalcon_20233:HG2_PB_assemblyticsfalcon_20315:HG2_PB_assemblyticsPBcR_19657:HG4_PB_assemblyticsfalcon_19840:HG4_Ill_Krunchall_7564:HG3_Ill_Krunchall_7153:HG2_Ill_Krunchall_7284:HG4_PB_pbsv_5076:HG4_PB_SVrefine2PBcRDovetail_2575:HG4_PB_SVrefine2Falcon1Dovetail_3078:HG4_Ill_SVrefine2DISCOVARDovetail_3880:HG4_Ill_MetaSV_3937:HG4_Ill_GATKHCSBGrefine_3609:HG3_PB_pbsv_4908:HG3_PB_SVrefine2PBcRDovetail_2309:HG3_PB_SVrefine2Falcon1Dovetail_3118:HG3_Ill_SVrefine2DISCOVARDovetail_3922:HG3_Ill_MetaSV_3936:HG2_PB_pbsv_5046:HG2_PB_SVrefine2PBcRplusDovetail_8436:HG2_PB_SVrefine2PB10Xhap12_3669:HG2_PB_SVrefine2Falcon2Bionano_2447:HG2_PB_SVrefine2Falcon1plusDovetail_9069:HG2_Ill_SpiralSDKrefine_12901:HG2_Ill_SVrefine2DISCOVARplusDovetail_9896:HG2_Ill_MetaSV_3763:HG2_Ill_GATKHCSBGrefine_3456:HG2_10X_SVrefine210Xhap12_3708:HG2_Ill_breakscan11_705;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3708:HG2_Ill_GATKHCSBGrefine_3456:HG2_Ill_MetaSV_3763:HG2_Ill_SVrefine2DISCOVARplusDovetail_9896:HG2_Ill_SpiralSDKrefine_12901:HG2_PB_SVrefine2Falcon1plusDovetail_9069:HG2_PB_SVrefine2Falcon2Bionano_2447:HG2_PB_SVrefine2PB10Xhap12_3669:HG2_PB_SVrefine2PBcRplusDovetail_8436:HG2_PB_pbsv_5046:HG3_Ill_MetaSV_3936:HG3_Ill_SVrefine2DISCOVARDovetail_3922:HG3_PB_SVrefine2Falcon1Dovetail_3118:HG3_PB_SVrefine2PBcRDovetail_2309:HG3_PB_pbsv_4908:HG4_Ill_GATKHCSBGrefine_3609:HG4_Ill_MetaSV_3937:HG4_Ill_SVrefine2DISCOVARDovetail_3880:HG4_PB_SVrefine2Falcon1Dovetail_3078:HG4_PB_SVrefine2PBcRDovetail_2575:HG4_PB_pbsv_5076;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00253872;ClusterMaxSizeDiff=0.00253872;ClusterMaxEditDist=0.00253872;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-5914;DistBack=3673;DistForward=65793;DistMin=3673;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=4:161879030-161884948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2967.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:116:./.:0:0:0:0:./.:0:0:0:0:1/1:0:44:1/1:0:409:6090:.:.
chr4	162263705	HG2_Ill_GATKHCSBGrefine_3459	TATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTACGTTACGTTACGTTACGTTACGTTACGTTACGCTACGCTACGCTACGATACG	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3937:HG4_Ill_Krunchall_7569:HG4_PB_SVrefine2Falcon1Dovetail_3080:HG4_PB_assemblyticsfalcon_19846:HG3_Ill_SVrefine2DISCOVARDovetail_3925:HG3_Ill_GATKHC_8515:HG3_Ill_GATKHCSBGrefine_3437:HG3_Ill_250bpfermikitraw_6885:HG2_PB_SVrefine2PBcRplusDovetail_8438:HG2_PB_SVrefine2PB10Xhap12_3671:HG4_Ill_svaba_6641:HG4_Ill_GATKHC_8580:HG4_Ill_GATKHCSBGrefine_3613:HG3_PB_SVrefine2Falcon1Dovetail_3120:HG2_PB_SVrefine2Falcon1plusDovetail_9072:HG2_Ill_GATKHC_8510:HG2_Ill_GATKHCSBGrefine_3459:HG2_10X_SVrefine210Xhap12_3712:HG2_PB_pbsv_5049:HG4_PB_pbsv_5080:HG4_PB_SVrefine2PBcRDovetail_2577:HG4_Ill_svaba_6640:HG4_Ill_SVrefine2DISCOVARDovetail_3882:HG4_Ill_GATKHCSBGrefine_3612:HG3_PB_pbsv_4911;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3712:HG2_Ill_GATKHCSBGrefine_3459:HG2_Ill_GATKHC_8510:HG2_PB_SVrefine2Falcon1plusDovetail_9072:HG3_PB_SVrefine2Falcon1Dovetail_3120:HG4_Ill_GATKHCSBGrefine_3613:HG4_Ill_GATKHC_8580:HG4_Ill_svaba_6641;NumExactMatchSVs=8;ClusterMaxShiftDist=0.232558;ClusterMaxSizeDiff=0.232558;ClusterMaxEditDist=0.232558;PBcalls=10;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-103;DistBack=69794;DistForward=-31;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=80;REFWIDENED=4:162263706-162263888;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2968.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:./.:17:9:9:18:./.:0:0:0:0:0/1:37:26:./.:.:.:.:.:.
chr4	164076990	HG2_PB_SVrefine2Falcon1plusDovetail_9079	CCAGAAAACATACTGTGGGACATTACCACTCTGGCAGTGCACAGAAGATACAAAGAATTAGATGTAAAAGGCATACTAATAAACTAAAAAAATTGAAGGTAGAGGTGATAGGAAAGGCCTGGGATAGAAAGACCTTCTTCATCACACATAAGCAACAACCAAGGGTACTAAAAATAAAAGACAAGGTGATTTAGTGCAGATTAGAAAGATTAAAGTATCTGCCTGGATACCAACAACCCCTGTTAAAAGAATGATGAGTAGATAGGAAAGACTTTTTGTTTTATTTACTCAATATTAGATACAAATTTAAATTTAATTAAAATTAAATAAAATTTAAAATTTGGTCT	C	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3939:HG3_PB_pbsv_4927:HG2_PB_pbsv_5061:HG4_PB_pbsv_5095:HG4_PB_SVrefine2PBcRDovetail_2580:HG4_PB_SVrefine2Falcon1Dovetail_3089:HG4_Ill_SVrefine2DISCOVARDovetail_3887:HG4_Ill_150bpfermikitraw_6887:HG3_PB_SVrefine2Falcon1Dovetail_3132:HG2_PB_SVrefine2PB10Xhap12_3678:HG2_PB_SVrefine2Falcon2Bionano_2454:HG2_PB_SVrefine2Falcon1plusDovetail_9079;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9079:HG2_PB_SVrefine2Falcon2Bionano_2454:HG2_PB_SVrefine2PB10Xhap12_3678:HG3_PB_SVrefine2Falcon1Dovetail_3132:HG4_Ill_150bpfermikitraw_6887:HG4_Ill_SVrefine2DISCOVARDovetail_3887:HG4_PB_SVrefine2Falcon1Dovetail_3089:HG4_PB_SVrefine2PBcRDovetail_2580;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0203193;ClusterMaxSizeDiff=0.0203193;ClusterMaxEditDist=0.0233236;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-346;DistBack=58356;DistForward=-347;DistMin=-347;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=346;REFWIDENED=4:164076991-164077682;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2969.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:25:0|1:30:3:1:21:./.:0:0:0:0:0/1:14:3:./.:11:1:.:.:.
chr4	164501940	HG4_PB_SVrefine2Falcon1Dovetail_3090	AAGTATTAAAGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_568:HG4_PB_HySA_7604:HG2_PB_assemblyticsfalcon_20337:HG4_PB_assemblyticsfalcon_19865:HG4_Ill_Krunchall_7597:HG2_Ill_Spiral_371:HG4_PB_pbsv_5098:HG4_PB_SVrefine2PBcRDovetail_2581:HG4_PB_SVrefine2Falcon1Dovetail_3090:HG4_Ill_manta_1278:HG4_Ill_SVrefine2DISCOVARDovetail_3888:HG4_Ill_GATKHCSBGrefine_3627:HG4_10X_allpass_979:HG3_PB_pbsv_4928:HG3_PB_SVrefine2PBcRDovetail_2316:HG3_Ill_manta_1188:HG3_Ill_SVrefine2DISCOVARDovetail_3934:HG3_Ill_GATKHCSBGrefine_3451:HG3_10X_allpass_1021:HG2_PB_pbsv_5063:HG2_PB_SVrefine2Falcon2Bionano_2455:HG2_Ill_breakscan11_708:HG2_Ill_SpiralSDKrefine_12915:HG2_Ill_SVrefine2DISCOVARplusDovetail_9903:HG2_Ill_MetaSV_3769:HG2_Ill_GATKHCSBGrefine_3471:HG2_10X_allpass_829:HG2_10X_SVrefine210Xhap12_3718:HG4_Ill_MetaSV_3940:HG3_Ill_MetaSV_3944;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3718:HG2_10X_allpass_829:HG2_Ill_GATKHCSBGrefine_3471:HG2_Ill_MetaSV_3769:HG2_Ill_SVrefine2DISCOVARplusDovetail_9903:HG2_Ill_SpiralSDKrefine_12915:HG2_Ill_breakscan11_708:HG2_PB_SVrefine2Falcon2Bionano_2455:HG2_PB_pbsv_5063:HG3_10X_allpass_1021:HG3_Ill_GATKHCSBGrefine_3451:HG3_Ill_SVrefine2DISCOVARDovetail_3934:HG3_Ill_manta_1188:HG3_PB_SVrefine2PBcRDovetail_2316:HG3_PB_pbsv_4928:HG4_10X_allpass_979:HG4_Ill_GATKHCSBGrefine_3627:HG4_Ill_SVrefine2DISCOVARDovetail_3888:HG4_Ill_manta_1278:HG4_PB_SVrefine2Falcon1Dovetail_3090:HG4_PB_SVrefine2PBcRDovetail_2581:HG4_PB_pbsv_5098;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0878049;ClusterMaxSizeDiff=0.0878049;ClusterMaxEditDist=0.0878049;PBcalls=10;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=38582;DistForward=13993;DistMin=13993;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:164501941-164502267;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2970.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:53:16:0|1:51:1:2:15:./.:0:0:0:0:0/1:52:20:0/1:18:7:.:.:.
chr4	164516247	HG4_Ill_250bpfermikitraw_7190	CGAGTGGCTCATGCCTGTAAACTCAGCACTTTGGGAGGCCAAGGCGGGAGGACTGCTTGAGCTCAGTTTGAGAGTGAAGCTACGGAAACAACCTAAATGTCCATCAACTTATCAATAGAGAAAGAAAATATGGTATAAGCCAGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3719:HG4_PB_assemblyticsfalcon_19866:HG2_PB_assemblyticsPBcR_19681:HG3_PB_HySA_7837:HG3_PB_pbsv_4929:HG2_PB_pbsv_5064:HG4_PB_pbsv_5099:HG4_PB_SVrefine2PBcRDovetail_2582:HG4_PB_SVrefine2Falcon1Dovetail_3091:HG4_Ill_SVrefine2DISCOVARDovetail_3889:HG4_Ill_GATKHC_8608:HG4_Ill_GATKHCSBGrefine_3628:HG4_Ill_250bpfermikitraw_7190:HG4_Ill_150bpfermikitraw_6888:HG3_Ill_SVrefine2DISCOVARDovetail_3935:HG3_10X_allpass_1022:HG2_PB_SVrefine2PBcRplusDovetail_8446:HG2_PB_SVrefine2PB10Xhap12_3679:HG2_PB_SVrefine2Falcon2Bionano_2456:HG2_10X_SVrefine210Xhap12_3720:HG3_PB_SVrefine2PBcRDovetail_2317:HG3_PB_SVrefine2Falcon1Dovetail_3133;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3720:HG2_PB_SVrefine2Falcon2Bionano_2456:HG2_PB_SVrefine2PB10Xhap12_3679:HG2_PB_SVrefine2PBcRplusDovetail_8446:HG3_10X_allpass_1022:HG3_Ill_SVrefine2DISCOVARDovetail_3935:HG4_Ill_150bpfermikitraw_6888:HG4_Ill_250bpfermikitraw_7190:HG4_Ill_GATKHCSBGrefine_3628:HG4_Ill_GATKHC_8608:HG4_Ill_SVrefine2DISCOVARDovetail_3889:HG4_PB_SVrefine2Falcon1Dovetail_3091:HG4_PB_SVrefine2PBcRDovetail_2582;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00699301;ClusterMaxSizeDiff=0.00696864;ClusterMaxEditDist=0.0209059;PBcalls=13;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-143;DistBack=13993;DistForward=-121;DistMin=-121;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=146;REFWIDENED=4:164516174-164516462;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2971.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:48:0|1:22:6:1:33:./.:0:0:0:0:0/1:21:15:./.:.:.:.:.:.
chr4	164658298	HG2_Ill_manta_1449	CTCGCAGCTTTTTTCTTTCTTTTTTTTTTTTTTTTTTCACATATTAGTTTATTTATTTATTTTTTTTAATTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGACAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTTGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTCTAAAGACACATGCACACGTATGTTTATTGCGGCACTAT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8447:HG4_PB_assemblyticsfalcon_19872:HG2_10X_allpass_830:HG3_PB_assemblyticsfalcon_20267:HG2_PB_assemblyticsfalcon_20341:HG4_Ill_Krunchall_7600:HG3_Ill_Krunchall_7191:HG2_PB_pbsv_5066:HG4_PB_pbsv_5101:HG2_Ill_tnscope_569:HG4_PB_SVrefine2Falcon1Dovetail_3092:HG4_Ill_manta_1279:HG4_Ill_SVrefine2DISCOVARDovetail_3890:HG4_Ill_MetaSV_3941:HG4_Ill_GATKHCSBGrefine_3629:HG4_10X_allpass_980:HG3_PB_pbsv_4931:HG3_PB_SVrefine2PBcRDovetail_2318:HG3_PB_SVrefine2Falcon1Dovetail_3134:HG3_Ill_manta_1189:HG3_Ill_SVrefine2DISCOVARDovetail_3936:HG3_Ill_MetaSV_3945:HG3_Ill_GATKHCSBGrefine_3454:HG3_10X_allpass_1023:HG2_PB_SVrefine2Falcon1plusDovetail_9080:HG2_Ill_manta_1449:HG2_Ill_breakscan11_709:HG2_Ill_MetaSV_3770:HG2_Ill_GATKHCSBGrefine_3474:HG2_10X_SVrefine210Xhap12_3721:HG2_PB_assemblyticsPBcR_19682;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3721:HG2_Ill_GATKHCSBGrefine_3474:HG2_Ill_MetaSV_3770:HG2_Ill_breakscan11_709:HG2_Ill_manta_1449:HG2_PB_SVrefine2Falcon1plusDovetail_9080:HG3_10X_allpass_1023:HG3_Ill_GATKHCSBGrefine_3454:HG3_Ill_MetaSV_3945:HG3_Ill_SVrefine2DISCOVARDovetail_3936:HG3_Ill_manta_1189:HG3_PB_SVrefine2Falcon1Dovetail_3134:HG3_PB_SVrefine2PBcRDovetail_2318:HG3_PB_pbsv_4931:HG4_10X_allpass_980:HG4_Ill_GATKHCSBGrefine_3629:HG4_Ill_MetaSV_3941:HG4_Ill_SVrefine2DISCOVARDovetail_3890:HG4_Ill_manta_1279:HG4_PB_SVrefine2Falcon1Dovetail_3092;NumExactMatchSVs=20;ClusterMaxShiftDist=0.170333;ClusterMaxSizeDiff=0.170333;ClusterMaxEditDist=0.170525;PBcalls=12;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-834;DistBack=3887;DistForward=4337;DistMin=3887;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:164658299-164659146;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2972.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:0|1:27:0:0:27:./.:0:0:0:0:0/1:32:10:0/1:61:15:.:.:.
chr4	165267748	HG2_Ill_150bpfermikitraw_6670	GTATGTATGTATATATATATATATATATATATATATATATATATATATATATATATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3723:HG2_Ill_Krunchall_7321:HG4_PB_HySA_7613:HG2_PB_HySA_9562:HG3_PB_HySA_7847:HG2_Ill_breakscan11_710:HG4_Ill_scalpel_4953:HG4_Ill_manta_1281:HG4_Ill_Krunchall_7607:HG4_Ill_GATKHC_8619:HG4_Ill_GATKHCSBGrefine_3633:HG4_Ill_250bpfermikitraw_7199:HG4_Ill_150bpfermikitraw_6896:HG4_10X_allpass_981:HG3_Ill_scalpel_5122:HG3_Ill_manta_1190:HG3_Ill_Krunchall_7195:HG3_Ill_GATKHC_8555:HG3_Ill_GATKHCSBGrefine_3456:HG3_Ill_250bpfermikitraw_6919:HG3_Ill_150bpfermikitraw_6750:HG2_Ill_scalpel_5036:HG2_Ill_manta_1451:HG2_Ill_SpiralSDKrefine_12924:HG2_Ill_Krunchall_7320:HG2_Ill_GATKHC_8543:HG2_Ill_GATKHCSBGrefine_3476:HG2_Ill_250bpfermikitraw_7146:HG2_Ill_150bpfermikitraw_6670:HG4_PB_pbsv_5105:HG2_PB_pbsv_5069:HG3_PB_pbsv_4934:HG2_PB_SVrefine2Falcon1plusDovetail_9082:HG4_PB_SVrefine2PBcRDovetail_2584:HG4_PB_SVrefine2Falcon1Dovetail_3095:HG4_Ill_SVrefine2DISCOVARDovetail_3891:HG3_PB_SVrefine2PBcRDovetail_2321:HG3_PB_SVrefine2Falcon1Dovetail_3135:HG3_Ill_SVrefine2DISCOVARDovetail_3938:HG2_PB_SVrefine2PBcRplusDovetail_8450:HG2_PB_SVrefine2PB10Xhap12_3684:HG2_PB_SVrefine2Falcon2Bionano_2459:HG2_Ill_SVrefine2DISCOVARplusDovetail_9905;NumClusterSVs=43;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6670:HG2_Ill_250bpfermikitraw_7146:HG2_Ill_GATKHCSBGrefine_3476:HG2_Ill_GATKHC_8543:HG2_Ill_Krunchall_7320:HG2_Ill_SpiralSDKrefine_12924:HG2_Ill_manta_1451:HG2_Ill_scalpel_5036:HG3_Ill_150bpfermikitraw_6750:HG3_Ill_250bpfermikitraw_6919:HG3_Ill_GATKHCSBGrefine_3456:HG3_Ill_GATKHC_8555:HG3_Ill_Krunchall_7195:HG3_Ill_manta_1190:HG3_Ill_scalpel_5122:HG4_10X_allpass_981:HG4_Ill_150bpfermikitraw_6896:HG4_Ill_250bpfermikitraw_7199:HG4_Ill_GATKHCSBGrefine_3633:HG4_Ill_GATKHC_8619:HG4_Ill_Krunchall_7607:HG4_Ill_manta_1281:HG4_Ill_scalpel_4953;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.0869565;PBcalls=14;Illcalls=27;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-56;DistBack=6190;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=4:165267745-165267821;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2973.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:59:./.:0:0:1:7:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr4	166002544	HG4_PB_SVrefine2Falcon1Dovetail_3098	TTTTTTTTTTGAGACGGAAACTTGCTCTGTTGCCCAGGCTGGAGCACAGTGGTGCGATCTCAGCTCACTGCAAACTCCGCCTCATGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTATAAGCGCCCATCATCACGCCCGGCTAATTTTTTTTTTTTTGTATTTTTCAGTAGAGATGGGGTTTCACCATATTAGCCAGGATGGTCTCGATATCCTGACCCCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGTCCGGCAGAGACCGAGTCTTGCTCTGTGGCCCAGGCTGGAGTGCAATGGCGCAATCTCGGCTCACTGCAACCTCTGCCTCCCCGGTTCAAGCTATTCTTCTGCCTCAGCCTCTAGGATTACAGGCATGTACCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGACCAGGCTGGTCTCAAACTGCTGACCTCAAGTGATCCACCCTCCTTGGCCTCCTATAGTGCTGGGATTACAGGCGTGAGCCACCATGACTGACCATCTTCTTTTTTTTTTTTTTTTTCAACACAGAGTCTCACTCCATTGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACAGCAACCTCCGCCTCCAGGGTTCCCGCGATTCTCCTGCCTCACCCTCCCGAGTAGCTGGGACTACAGGCGTGCACCACCACACCCAGCTAATTTTTATATTTTTAGTAGAGATGGGGTTTCAGCACGTTGACCAGGCTGGTCTTAAACTCCTGACCTCAAGTGATCCACCCGCCTCAGCCTCCCAACGTGCTGGGAATACAGGCCTAAGCCACCACACCCAGACCTGGACATCGTCTATATACAGTAGACTTTCAATTAACATCCCTGTTCCCTGCCCTATGTTCCACTCCTGGGCATCCTGTTCATTTCTGAGTTCCAAGTCTCTCTGGGGCTACACAAAAAGAGTGGCTGCCTCCTTGGCTTTATTTCTCCCCGTGTCCTCTAAATGTAGCCTCTCTGCCCTGTGGTATTGTCTACCGCTCCTTCATCTGTATTCTGTAGCCCACACATTTTCAGAAATCACTCAACCATCGATGGTCCCTTTCTCCTCCAGTTTTTCTGCTAGTGTGGGTAGGTTGGTCTTTTTTAATCCTTCACTATCCTTTTGGAAGGATCTGGGGAGGGTGAAGGGATAAACGTGTGGCTAGATTTACCTTCTTTCATTGGAAGTTGATTCAAATTTTCAAACTGAGATGCATTTTCAAAGAAGCATTCCATACAAATTTTAAAAGTAAAAGAGGAATATAAACTGAATTTTTTTTTTTTTGGAACAAAGTTTCACTCTCGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTCCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCGCACCACCACGCCCGGCTAATTTTTGTATACTCAGTAGAGACAGGGTTTCACCATGCTGACCAGGCTGGTCTGAACTTCTGACCTCAGGTGATGCACCCGCCTCGGCCTCACAAAGTACTGGGATTACAGGCGTGAGCCACCACGTCCGGCATAAACTGAATTTCATTGCCCCAAAGTTAACCCCATGAGGTGAAGGGAATACATTTTAAAAAGCTTTCCATTAAGTCATAAGAGAGCAATATTAGGTAAACTCTTCAGTGCTCAGGGGGAACAAGATGAAATATGAAAAGGGTCAAGGTCAGGAAGAACAGTCTCTGAATTTAATAAGCCCAAAAGTCAACAAAGAGATAATCAACAATTGATACTAAAGTTATTCCTCTATTTAGGTTAGAATGAAGAAAAAGAGTAAACAAAATAAGAAGGCAGATCATGGTAAGTGAAAAGTGACAAAAAAAAGTTGTATTTTCTAGGGGAAAGAATCTATTTCACTAAAGACACCTCCGTTTTCATAGTTCTGTACGTATTGAGAATTATAGACAGTATAATCCAGGCTTCAAGAAACCGAGGGTAAAGGATTCTAGAACTATCAAGATATCATCAGTTTACACTGTGGGACAGAGATAACGATCCCAAGAAGAACAACCTTGGACTTGCTGCTCATTAAGTGTTTGTTTTTGTTTTTTGTTCTTTTTTCTTTTTATTCATTAAGTATTTATATTCCACACTATAATAAAAAGCAATGTGCATCCTGATTCAACACTGTCACACCTGTGTTGTCACTTCACACCTGTGCCTAACAACAGTTCAGTTTATAAAAGCTAATTTAAAAATGACACTAATTCAAAAATTGGCCTTACTAAAAGCCAATACATTAAACTATATTTATTTCAACAACTGTTTTTAAAAGTATCTCTTTCCTTTATCTATAAAGTTTTTTGTTGTTGTTG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3729:HG2_PB_assemblyticsPBcR_19696:HG2_PB_SVrefine2PBcRplusDovetail_8453:HG2_10X_allpass_831:HG4_10X_allpass_984:HG4_Ill_MetaSV_3944:HG2_Ill_MetaSV_3773:HG3_10X_allpass_1026:HG2_PB_HySA_9569:HG3_Ill_MetaSV_3947:HG3_Ill_GATKHCSBGrefine_3461:HG2_Ill_SpiralSDKrefine_12928:HG4_PB_pbsv_5111:HG2_PB_pbsv_5074:HG2_Ill_tnscope_570:HG3_PB_pbsv_4939:HG3_PB_SVrefine2PBcRDovetail_2324:HG4_PB_SVrefine2PBcRDovetail_2588:HG4_PB_SVrefine2Falcon1Dovetail_3098:HG4_Ill_SVrefine2DISCOVARDovetail_3893:HG3_PB_SVrefine2Falcon1Dovetail_3138:HG3_Ill_SVrefine2DISCOVARDovetail_3942;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3729:HG4_PB_SVrefine2PBcRDovetail_2588:HG4_PB_SVrefine2Falcon1Dovetail_3098:HG4_Ill_SVrefine2DISCOVARDovetail_3893:HG3_PB_SVrefine2Falcon1Dovetail_3138:HG3_Ill_SVrefine2DISCOVARDovetail_3942;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0917874;ClusterMaxSizeDiff=0.0917874;ClusterMaxEditDist=0.0917874;PBcalls=10;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2438;DistBack=11938;DistForward=-2151;DistMin=-2151;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=281;REFWIDENED=4:166002545-166005263;PctSeqSimilarity=0.9122;PctSizeSimilarity=1;PctRecOverlap=0.9701;SizeDiff=0;StartDistance=-73;EndDistance=-73;GTMatch=0;TruScore=96;MatchId=2974.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:35:0|1:35:0:0:25:./.:0:0:0:0:./.:50:4:0/1:204:75:2449:.:.
chr4	167004317	HG2_PB_SVrefine2Falcon2Bionano_2463	GAACTTTCTTCACAGTTCATGGATTGATACCCCTTTTTCTTTAGGCAGGGTGGGAAAATAAGAAAGAAAGAATTTTTTTTCTTTTTTAAATTTATGTTCTCATTGACAGATAAAATTGCATGTATTTACCATGTACAATGTGATATATTGAAGTATATGTACATTGTTTAATGACTAAATTTAGCTAATTAATATATGTATTATTCATGTTTTGATCATATTTGTGGGGAAAAAACACTTAACATCCACTATCTTAGCATTTTTAAGAGTATATTATTAACTATAAGTCACCATGTTGTATGATAGTTCTATTGAATTTATTCCTTCCATCTAACTGAAATTTTGTATTTTTTGACTGACATCTACTCAACCCTTTCCCATCTCAACCACCCTAGCCTTTGGTCAACACCATTCAACTCTCTGCTTCTTTAAGTTTGATCATTTTAGATTCCACATGTAAGTGTGACCATGTAGTATTTATCTTTCTGTGCCTGGCTTGCTTTATTTAACATAATGTCCTGCGGTTTCACCCATGTTGTTACAAATGACAAGATTTCCTTCATTTTGTGGCTGAATATTCCTCCACTGTGTATATATACCACA	TTAGCAC	20	PASS	ClusterIDs=HG2_PB_pbsv_5080:HG2_Ill_SpiralSDKrefine_12932:HG3_PB_SVrefine2Falcon1Dovetail_3143:HG2_Ill_tnscope_571:HG4_PB_SVrefine2PBcRDovetail_2593:HG4_PB_SVrefine2Falcon1Dovetail_3102:HG4_Ill_manta_1286:HG4_Ill_SVrefine2DISCOVARDovetail_3900:HG2_PB_assemblyticsPBcR_19705:HG2_PB_SVrefine2PBcRplusDovetail_8457:HG2_PB_SVrefine2PB10Xhap12_3691:HG2_PB_SVrefine2Falcon2Bionano_2463:HG2_Ill_manta_1455:HG2_10X_SVrefine210Xhap12_3732:HG2_PB_SVrefine2Falcon1plusDovetail_9090:HG2_PB_assemblyticsfalcon_20362:HG4_Ill_Spiral_424:HG2_Ill_Spiral_374:HG4_10X_allpass_986:HG2_10X_allpass_832:HG3_PB_assemblyticsfalcon_20289:HG4_Ill_MetaSV_3947:HG2_Ill_MetaSV_3776:HG4_PB_assemblyticsfalcon_19899:HG4_Ill_Krunchall_7624:HG2_Ill_Krunchall_7331:HG4_PB_HySA_7627:HG2_PB_HySA_9584:HG4_PB_pbsv_5118;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3732:HG2_Ill_manta_1455:HG2_PB_SVrefine2Falcon2Bionano_2463:HG2_PB_SVrefine2PB10Xhap12_3691:HG2_PB_SVrefine2PBcRplusDovetail_8457:HG2_PB_assemblyticsPBcR_19705:HG4_Ill_SVrefine2DISCOVARDovetail_3900:HG4_Ill_manta_1286:HG4_PB_SVrefine2Falcon1Dovetail_3102:HG4_PB_SVrefine2PBcRDovetail_2593;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0232558;ClusterMaxSizeDiff=0.0232558;ClusterMaxEditDist=0.0232558;PBcalls=15;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-596;DistBack=-180;DistForward=-419;DistMin=-419;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:167004317-167004919;PctSeqSimilarity=0.9746;PctSizeSimilarity=0.9966;PctRecOverlap=0.9851;SizeDiff=2;StartDistance=1;EndDistance=9;GTMatch=0;TruScore=98;MatchId=2975.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:38:1|0:5:30:26:4:./.:0:0:0:0:0/1:59:18:0/1:57:14:.:.:.
chr4	167108087	HG4_PB_SVrefine2PBcRDovetail_2594	ATCTTCCAACCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3733:HG4_10X_allpass_987:HG2_10X_allpass_833:HG2_Ill_Krunchall_7333:HG4_PB_assemblyticsfalcon_19901:HG3_PB_assemblyticsfalcon_20291:HG2_PB_assemblyticsfalcon_20364:HG2_PB_assemblyticsPBcR_19707:HG4_PB_pbsv_5119:HG2_PB_pbsv_5081:HG2_PB_HySA_9586:HG4_PB_HySA_7629:HG4_Ill_MetaSV_3948:HG3_Ill_MetaSV_3950:HG2_Ill_tnscope_572:HG2_Ill_MetaSV_3777:HG4_PB_SVrefine2PBcRDovetail_2594:HG4_PB_SVrefine2Falcon1Dovetail_3103:HG4_Ill_scalpel_4967:HG4_Ill_manta_1287:HG4_Ill_SVrefine2DISCOVARDovetail_3901:HG4_Ill_GATKHCSBGrefine_3646:HG3_PB_pbsv_4945:HG3_PB_SVrefine2PBcRDovetail_2330:HG3_PB_SVrefine2Falcon1Dovetail_3144:HG3_Ill_manta_1195:HG3_Ill_SVrefine2DISCOVARDovetail_3948:HG3_Ill_GATKHCSBGrefine_3467:HG3_10X_allpass_1027:HG2_PB_SVrefine2PBcRplusDovetail_8458:HG2_PB_SVrefine2PB10Xhap12_3692:HG2_PB_SVrefine2Falcon2Bionano_2464:HG2_PB_SVrefine2Falcon1plusDovetail_9091:HG2_Ill_manta_1456:HG2_Ill_breakscan11_712:HG2_Ill_SpiralSDKrefine_12933:HG2_Ill_SVrefine2DISCOVARplusDovetail_9916:HG2_Ill_GATKHCSBGrefine_3487;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3733:HG4_PB_SVrefine2PBcRDovetail_2594:HG4_PB_SVrefine2Falcon1Dovetail_3103:HG4_Ill_scalpel_4967:HG4_Ill_manta_1287:HG4_Ill_SVrefine2DISCOVARDovetail_3901:HG4_Ill_GATKHCSBGrefine_3646:HG3_PB_pbsv_4945:HG3_PB_SVrefine2PBcRDovetail_2330:HG3_PB_SVrefine2Falcon1Dovetail_3144:HG3_Ill_manta_1195:HG3_Ill_SVrefine2DISCOVARDovetail_3948:HG3_Ill_GATKHCSBGrefine_3467:HG3_10X_allpass_1027:HG2_PB_SVrefine2PBcRplusDovetail_8458:HG2_PB_SVrefine2PB10Xhap12_3692:HG2_PB_SVrefine2Falcon2Bionano_2464:HG2_PB_SVrefine2Falcon1plusDovetail_9091:HG2_Ill_manta_1456:HG2_Ill_breakscan11_712:HG2_Ill_SpiralSDKrefine_12933:HG2_Ill_SVrefine2DISCOVARplusDovetail_9916:HG2_Ill_GATKHCSBGrefine_3487;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0923994;ClusterMaxSizeDiff=0.0923994;ClusterMaxEditDist=0.0923994;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-342;DistBack=5108;DistForward=66490;DistMin=5108;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:167108088-167108445;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2976.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:1:35:0:29:./.:0:0:0:0:1/1:0:54:0/1:2:16:.:.:.
chr4	167677025	HG4_PB_SVrefine2Falcon1Dovetail_3104	TAAAAATTAAATAAGAGATTTGGGACAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGTCGCACCTGGAAAATCAGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTAGTTCTCCCAGCACGCAGATGGAGATCTGAGAACGGGCAGACAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAATGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAACGCAGAAATAAAGATGTTCTTTGAAACCAACAAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACATCATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGACATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGACCCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_7631:HG2_10X_allpass_835:HG3_10X_allpass_1029:HG4_Ill_Krunchall_7633:HG4_PB_assemblyticsfalcon_19909:HG2_PB_assemblyticsfalcon_20373:HG2_PB_assemblyticsPBcR_19720:HG3_PB_assemblyticsfalcon_20305:HG4_Ill_Krunchall_7632:HG3_Ill_Krunchall_7217:HG2_Ill_Krunchall_7340:HG2_Ill_tnscope_573:HG4_PB_pbsv_5123:HG4_Ill_MetaSV_3949:HG4_Ill_GATKHCSBGrefine_3648:HG3_Ill_MetaSV_3951:HG3_Ill_GATKHCSBGrefine_3469:HG2_PB_pbsv_5085:HG2_Ill_MetaSV_3778:HG2_Ill_GATKHCSBGrefine_3491:HG2_Ill_breakscan11_713:HG4_PB_SVrefine2PBcRDovetail_2595:HG4_PB_SVrefine2Falcon1Dovetail_3104:HG4_Ill_SVrefine2DISCOVARDovetail_3903:HG3_PB_SVrefine2PBcRDovetail_2332:HG3_PB_SVrefine2Falcon1Dovetail_3145:HG3_Ill_SVrefine2DISCOVARDovetail_3954:HG2_PB_SVrefine2PBcRplusDovetail_8459:HG2_PB_SVrefine2PB10Xhap12_3694:HG2_PB_SVrefine2Falcon2Bionano_2466:HG2_PB_SVrefine2Falcon1plusDovetail_9094:HG2_Ill_SVrefine2DISCOVARplusDovetail_9919:HG2_10X_SVrefine210Xhap12_3735:HG3_PB_pbsv_4949;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3735:HG2_Ill_SVrefine2DISCOVARplusDovetail_9919:HG2_PB_SVrefine2Falcon1plusDovetail_9094:HG2_PB_SVrefine2Falcon2Bionano_2466:HG2_PB_SVrefine2PB10Xhap12_3694:HG2_PB_SVrefine2PBcRplusDovetail_8459:HG3_Ill_SVrefine2DISCOVARDovetail_3954:HG3_PB_SVrefine2Falcon1Dovetail_3145:HG3_PB_SVrefine2PBcRDovetail_2332:HG4_Ill_SVrefine2DISCOVARDovetail_3903:HG4_PB_SVrefine2Falcon1Dovetail_3104:HG4_PB_SVrefine2PBcRDovetail_2595;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00796416;ClusterMaxSizeDiff=0.00796416;ClusterMaxEditDist=0.00979416;PBcalls=15;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-6035;DistBack=3288;DistForward=38273;DistMin=3288;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:167670794-167685349;PctSeqSimilarity=0.9758;PctSizeSimilarity=1;PctRecOverlap=0.9982;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=99;MatchId=2977.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:12:125:1/1:0:5:0:22:./.:0:0:0:0:1/1:1:46:1/1:4:407:6150:.:.
chr4	168806478	HG3_10X_allpass_1031	GCAGGTAGCTTTTGTATCTTTGTAGCTATCTTATTTAGGAATAGAATGGAAGGCAGGTTTGCCCCATGCAATTCCCAGCTTGACTTTTCCCTTTGGCTTAGTGATTTTGCAGT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_5094:HG3_PB_pbsv_4957:HG3_PB_SVrefine2Falcon1Dovetail_3148:HG3_Ill_svaba_6699:HG3_Ill_scalpel_5156:HG3_Ill_manta_1198:HG3_Ill_SVrefine2DISCOVARDovetail_3961:HG3_Ill_MetaSV_3953:HG3_Ill_GATKHC_8610:HG3_Ill_GATKHCSBGrefine_3478:HG3_10X_allpass_1031:HG2_PB_assemblyticsPBcR_19731:HG2_PB_SVrefine2PBcRplusDovetail_8463:HG2_PB_SVrefine2PB10Xhap12_3699:HG2_PB_SVrefine2Falcon1plusDovetail_9099:HG2_PB_HySA_9614:HG2_Ill_svaba_6576:HG2_Ill_breakscan11_714:HG2_Ill_MetaSV_3779:HG2_Ill_GATKHC_8585:HG2_Ill_GATKHCSBGrefine_3502:HG2_10X_allpass_836:HG2_10X_SVrefine210Xhap12_3738:HG3_PB_assemblyticsfalcon_20318:HG2_PB_assemblyticsfalcon_20389:HG3_Ill_Spiral_5678:HG3_Ill_Krunchall_7235:HG2_Ill_Krunchall_7352;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3738:HG2_10X_allpass_836:HG2_Ill_GATKHCSBGrefine_3502:HG2_Ill_GATKHC_8585:HG2_Ill_MetaSV_3779:HG2_Ill_breakscan11_714:HG2_Ill_svaba_6576:HG2_PB_HySA_9614:HG2_PB_SVrefine2Falcon1plusDovetail_9099:HG2_PB_SVrefine2PB10Xhap12_3699:HG2_PB_SVrefine2PBcRplusDovetail_8463:HG2_PB_assemblyticsPBcR_19731:HG3_10X_allpass_1031:HG3_Ill_GATKHCSBGrefine_3478:HG3_Ill_GATKHC_8610:HG3_Ill_MetaSV_3953:HG3_Ill_SVrefine2DISCOVARDovetail_3961:HG3_Ill_manta_1198:HG3_Ill_scalpel_5156:HG3_Ill_svaba_6699:HG3_PB_SVrefine2Falcon1Dovetail_3148:HG3_PB_pbsv_4957;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0176991;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.0177778;PBcalls=10;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-112;DistBack=946;DistForward=18590;DistMin=946;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:168806479-168806591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2978.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:31:1|0:7:23:13:1:./.:0:0:0:0:0/1:42:22:./.:.:.:.:.:.
chr4	170099432	HG2_Ill_SVrefine2DISCOVARplusDovetail_9929	TAAATAAGCAACTATGCTTATTTAAAAAAATAAGCAACTATGCTTATTTAAAA	T	20	PASS	ClusterIDs=HG2_Ill_svaba_6587:HG2_PB_pbsv_5101:HG4_PB_pbsv_5137:HG3_PB_pbsv_4965:HG4_Ill_svaba_6718:HG4_Ill_manta_1289:HG4_Ill_GATKHC_8676:HG4_Ill_GATKHCSBGrefine_3665:HG4_Ill_250bpfermikitraw_7260:HG4_Ill_150bpfermikitraw_6948:HG3_PB_HySA_7908:HG3_Ill_svaba_6711:HG3_Ill_scalpel_5168:HG3_Ill_SVrefine2DISCOVARDovetail_3970:HG3_Ill_Krunchall_7251:HG3_Ill_GATKHC_8627:HG3_Ill_GATKHCSBGrefine_3481:HG3_Ill_FB_4712:HG3_Ill_250bpfermikitraw_6971:HG3_Ill_150bpfermikitraw_6811:HG3_10X_allpass_1032:HG2_PB_SVrefine2PBcRplusDovetail_8467:HG2_PB_SVrefine2PB10Xhap12_3703:HG2_PB_SVrefine2Falcon2Bionano_2475:HG2_PB_SVrefine2Falcon1plusDovetail_9103:HG2_Ill_svaba_6588:HG2_Ill_scalpel_5070:HG2_Ill_manta_1459:HG2_Ill_SVrefine2DISCOVARplusDovetail_9929:HG2_Ill_Krunchall_7370:HG2_Ill_GATKHC_8604:HG2_Ill_GATKHCSBGrefine_3506:HG2_Ill_250bpfermikitraw_7199:HG2_Ill_150bpfermikitraw_6722:HG2_10X_SVrefine210Xhap12_3741:HG3_PB_assemblyticsfalcon_20330:HG3_Ill_svaba_6710;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3741:HG2_Ill_150bpfermikitraw_6722:HG2_Ill_250bpfermikitraw_7199:HG2_Ill_GATKHCSBGrefine_3506:HG2_Ill_GATKHC_8604:HG2_Ill_Krunchall_7370:HG2_Ill_SVrefine2DISCOVARplusDovetail_9929:HG2_Ill_manta_1459:HG2_Ill_scalpel_5070:HG2_Ill_svaba_6588:HG2_PB_SVrefine2Falcon1plusDovetail_9103:HG2_PB_SVrefine2Falcon2Bionano_2475:HG2_PB_SVrefine2PB10Xhap12_3703:HG2_PB_SVrefine2PBcRplusDovetail_8467:HG3_10X_allpass_1032:HG3_Ill_150bpfermikitraw_6811:HG3_Ill_250bpfermikitraw_6971:HG3_Ill_FB_4712:HG3_Ill_GATKHCSBGrefine_3481:HG3_Ill_GATKHC_8627:HG3_Ill_Krunchall_7251:HG3_Ill_SVrefine2DISCOVARDovetail_3970:HG3_Ill_scalpel_5168:HG3_Ill_svaba_6711:HG3_PB_HySA_7908:HG4_Ill_150bpfermikitraw_6948:HG4_Ill_250bpfermikitraw_7260:HG4_Ill_GATKHCSBGrefine_3665:HG4_Ill_GATKHC_8676:HG4_Ill_manta_1289:HG4_Ill_svaba_6718;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0384615;PBcalls=9;Illcalls=26;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=-1;DistForward=13898;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=35;REFWIDENED=4:170099433-170099519;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2979.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:78:1/1:3:19:1:12:./.:0:0:0:0:1/1:0:40:./.:.:.:.:.:.
chr4	170278460	HG2_Ill_GATKHCSBGrefine_3507	CCTGTAATCCCAGCACTTTGTGAGGCTGAGGTGGGAGGATTGCTTGAGGTCTGGAGTTCGAGACTAGGCTGGGAAGCAAAGCAAGACTCTGTCTCTACAAAAATTTAAAAGTTAGCTGAACATGGTCATGTACACCTGTAGACCCAGCTACCTGAGAGGCTGAGGTGGGAGGACTGCTTGAGTCTAGGAGTTTGAGACTGCAGTGAGTCATGATTTTGCCACTGGACTCCAGCCTGTGTGACAGAGTAAAATCCTGTCTCAAAAAAAAAGAATTATTAATGAGTATGTAGAACATTGATTCCACTTCTTCAGAATGCACATTCTTTTAGGAAAAAGTATATCTCAACAAATTTTAACTAACTGGTATCATATAAAAAAAAAATCAGCAAACTATGCTGTGTAGGCCAAACCCAGCTTGCCAT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_5140:HG4_Ill_Krunchall_7667:HG3_PB_pbsv_4966:HG3_Ill_Krunchall_7253:HG3_PB_HySA_7909:HG2_PB_HySA_9631:HG3_Ill_Krunchall_7252:HG2_Ill_Krunchall_7371:HG4_PB_assemblyticsfalcon_19937:HG2_PB_assemblyticsPBcR_19745:HG3_PB_assemblyticsfalcon_20331:HG2_PB_assemblyticsfalcon_20403:HG4_PB_HySA_7668:HG4_PB_SVrefine2PBcRDovetail_2603:HG4_PB_SVrefine2Falcon1Dovetail_3115:HG4_Ill_scalpel_4988:HG4_Ill_manta_1291:HG4_Ill_SVrefine2DISCOVARDovetail_3916:HG4_Ill_GATKHCSBGrefine_3667:HG4_10X_allpass_990:HG3_PB_SVrefine2PBcRDovetail_2341:HG3_PB_SVrefine2Falcon1Dovetail_3151:HG3_Ill_scalpel_5169:HG3_Ill_manta_1199:HG3_Ill_SVrefine2DISCOVARDovetail_3971:HG3_Ill_GATKHCSBGrefine_3482:HG3_10X_allpass_1034:HG2_PB_pbsv_5102:HG2_PB_SVrefine2PBcRplusDovetail_8468:HG2_PB_SVrefine2PB10Xhap12_3704:HG2_PB_SVrefine2Falcon2Bionano_2476:HG2_PB_SVrefine2Falcon1plusDovetail_9104:HG2_Ill_scalpel_5071:HG2_Ill_manta_1460:HG2_Ill_SpiralSDKrefine_12956:HG2_Ill_SVrefine2DISCOVARplusDovetail_9930:HG2_Ill_GATKHCSBGrefine_3507:HG2_10X_allpass_837:HG2_10X_SVrefine210Xhap12_3743:HG2_Ill_breakscan11_715:HG4_Ill_MetaSV_3955:HG3_Ill_MetaSV_3956:HG2_Ill_tnscope_574:HG2_Ill_MetaSV_3780;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3743:HG2_10X_allpass_837:HG2_Ill_GATKHCSBGrefine_3507:HG2_Ill_SVrefine2DISCOVARplusDovetail_9930:HG2_Ill_SpiralSDKrefine_12956:HG2_Ill_manta_1460:HG2_Ill_scalpel_5071:HG2_PB_SVrefine2Falcon1plusDovetail_9104:HG2_PB_SVrefine2Falcon2Bionano_2476:HG2_PB_SVrefine2PB10Xhap12_3704:HG2_PB_SVrefine2PBcRplusDovetail_8468:HG2_PB_pbsv_5102:HG3_10X_allpass_1034:HG3_Ill_GATKHCSBGrefine_3482:HG3_Ill_SVrefine2DISCOVARDovetail_3971:HG3_Ill_manta_1199:HG3_Ill_scalpel_5169:HG3_PB_SVrefine2Falcon1Dovetail_3151:HG3_PB_SVrefine2PBcRDovetail_2341:HG4_10X_allpass_990:HG4_Ill_GATKHCSBGrefine_3667:HG4_Ill_SVrefine2DISCOVARDovetail_3916:HG4_Ill_manta_1291:HG4_Ill_scalpel_4988:HG4_PB_SVrefine2Falcon1Dovetail_3115:HG4_PB_SVrefine2PBcRDovetail_2603;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0166271;ClusterMaxSizeDiff=0.0166271;ClusterMaxEditDist=0.0190024;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-421;DistBack=72806;DistForward=-417;DistMin=-417;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=4:170278461-170278885;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2980.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:19:0:16:./.:0:0:0:0:1/1:0:40:./.:1:19:.:.:.
chr4	170808437	HG2_Ill_GATKHCSBGrefine_3508	TTTCCAAGAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_7671:HG3_PB_pbsv_4969:HG2_PB_assemblyticsPBcR_19750:HG2_PB_SVrefine2PBcRplusDovetail_8469:HG3_Ill_Krunchall_7258:HG2_Ill_Krunchall_7376:HG2_PB_assemblyticsfalcon_20409:HG3_PB_assemblyticsfalcon_20339:HG4_PB_assemblyticsfalcon_19942:HG4_PB_pbsv_5143:HG2_PB_pbsv_5106:HG2_PB_HySA_9637:HG4_Ill_manta_1292:HG4_Ill_MetaSV_3957:HG4_Ill_GATKHCSBGrefine_3668:HG4_10X_allpass_991:HG3_PB_HySA_7915:HG3_Ill_manta_1201:HG3_Ill_MetaSV_3957:HG3_Ill_GATKHCSBGrefine_3484:HG3_10X_allpass_1035:HG2_Ill_manta_1461:HG2_Ill_GATKHCSBGrefine_3508:HG2_10X_allpass_838:HG2_PB_SVrefine2Falcon1plusDovetail_9107:HG2_Ill_MetaSV_3781:HG4_PB_SVrefine2PBcRDovetail_2605:HG4_PB_SVrefine2Falcon1Dovetail_3117:HG3_PB_SVrefine2Falcon1Dovetail_3154:HG3_Ill_SVrefine2DISCOVARDovetail_3977:HG2_PB_SVrefine2PB10Xhap12_3707:HG2_PB_SVrefine2Falcon2Bionano_2478:HG2_Ill_SVrefine2DISCOVARplusDovetail_9933:HG2_10X_SVrefine210Xhap12_3748:HG3_PB_SVrefine2PBcRDovetail_2344:HG4_Ill_Krunchall_7672;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_838:HG2_Ill_GATKHCSBGrefine_3508:HG2_Ill_manta_1461:HG3_10X_allpass_1035:HG3_Ill_GATKHCSBGrefine_3484:HG3_Ill_MetaSV_3957:HG3_Ill_manta_1201:HG3_PB_HySA_7915:HG4_10X_allpass_991:HG4_Ill_GATKHCSBGrefine_3668:HG4_Ill_MetaSV_3957:HG4_Ill_manta_1292;NumExactMatchSVs=12;ClusterMaxShiftDist=0.198319;ClusterMaxSizeDiff=0.198319;ClusterMaxEditDist=0.212479;PBcalls=17;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-280;DistBack=-154;DistForward=-272;DistMin=-272;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=374;REFWIDENED=4:170808431-170809084;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2981.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:35:0|1:31:2:4:29:./.:0:0:0:0:0/1:33:14:./.:.:.:.:.:.
chr4	171362507	HG4_10X_allpass_993	CACACTGGATTTCTTTGTGTGAAGTCACTAAAATTTCGGTTTCATCTTTTGTAGTAGTAAAGCTAACACAGTGAACTTTTTCAGCCCCAGTCTTTTCATACTTTTTAGGGAGATACTGGGCAAGAGGTTGCAAAATTGTTTTTGACTACCTCCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3751:HG2_PB_HySA_9642:HG4_PB_pbsv_5147:HG2_PB_pbsv_5109:HG3_PB_pbsv_4972:HG4_PB_HySA_7678:HG4_Ill_MetaSV_3960:HG4_PB_SVrefine2PBcRDovetail_2607:HG4_PB_SVrefine2Falcon1Dovetail_3119:HG4_Ill_SVrefine2DISCOVARDovetail_3918:HG4_Ill_250bpfermikitraw_7268:HG4_Ill_150bpfermikitraw_6955:HG4_10X_allpass_993:HG3_PB_SVrefine2PBcRDovetail_2346:HG3_PB_SVrefine2Falcon1Dovetail_3156:HG3_Ill_SVrefine2DISCOVARDovetail_3979:HG3_Ill_250bpfermikitraw_6980:HG3_Ill_150bpfermikitraw_6821:HG3_10X_allpass_1036:HG2_PB_SVrefine2PBcRplusDovetail_8471:HG2_PB_SVrefine2PB10Xhap12_3709:HG2_PB_SVrefine2Falcon2Bionano_2480:HG2_PB_SVrefine2Falcon1plusDovetail_9109:HG2_Ill_SVrefine2DISCOVARplusDovetail_9935:HG2_Ill_250bpfermikitraw_7208:HG2_Ill_150bpfermikitraw_6731;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3751:HG4_PB_SVrefine2PBcRDovetail_2607:HG4_PB_SVrefine2Falcon1Dovetail_3119:HG4_Ill_SVrefine2DISCOVARDovetail_3918:HG4_Ill_250bpfermikitraw_7268:HG4_Ill_150bpfermikitraw_6955:HG4_10X_allpass_993:HG3_PB_SVrefine2PBcRDovetail_2346:HG3_PB_SVrefine2Falcon1Dovetail_3156:HG3_Ill_SVrefine2DISCOVARDovetail_3979:HG3_Ill_250bpfermikitraw_6980:HG3_Ill_150bpfermikitraw_6821:HG3_10X_allpass_1036:HG2_PB_SVrefine2PBcRplusDovetail_8471:HG2_PB_SVrefine2PB10Xhap12_3709:HG2_PB_SVrefine2Falcon2Bionano_2480:HG2_PB_SVrefine2Falcon1plusDovetail_9109:HG2_Ill_SVrefine2DISCOVARplusDovetail_9935:HG2_Ill_250bpfermikitraw_7208:HG2_Ill_150bpfermikitraw_6731;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0261438;ClusterMaxSizeDiff=0.0261438;ClusterMaxEditDist=0.0330033;PBcalls=13;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-153;DistBack=34989;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=153;REFWIDENED=4:171362508-171362813;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2982.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:64:1/1:2:32:1:23:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr4	172374411	HG3_Ill_SVrefine2DISCOVARDovetail_3987	TGTGCTTTGTATTGCACTGTGCACTTTACATGGATTATTTTATGTAATCATTATAATAGCATGAAATGAGTGTTATTATTACCTTATTGTTATAATTATTTATTTTAATAAGAGCAGTTTTAGGTTCCAGGAAAAATAAAATGGAAAGTGCAAAGAGGGCTCACGTGTCTGTTACTCACTAATGCATACAGCCTCACCCAGTATCAATATATCACACCCGGTTGATACATTTGTCACAATTGATGAACCACCCTTAACATCATTCTTACACAAATTCATAGTATAAATTGGGGCTCACTTTTGATATTGTCTAACCTATAGGTTTTGATAAGTGTAAAAAATGCATATCCACCATTGTAGTATTCTGCAGAATACTTTTACTTCCCTAAAAATGCTCTGTGCTCCTCTTATTTCATCCCTCCCTTCCTCAACACTACTGGCAACCACTCATATTTTCACTGCATGCTTCTATCTTTTCCGTAATACCATATGGTTGAAATCATATAGTATATAGTCTTTTAAAATTGGCTGCTTTTAGTTAGTAATAGACATTTATATTTTCTTTTTTTGACACTTAATAACTCTTTTTATTTATTTGTTTGAGATGGAGTTTCACTCTTGGTTTTTTGTTTTGTTTTGTTTTTGTTTTTGTTTTTGTTTTGAGATGGAGTTTCACCCAGTCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCACCAGGCATGGCTAATTTTTCGTATTTTTAGCAAAGACAGGGCTTCACCATATCAATCAGGCTGTTCTTGAACCCCTGACCTCAGGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGTATTGTAGGCATGAGCCACCATGCCTGGCCGACAACTTATTTTTTAAAGTACTGAATAATATTCCATAGTCTAGATTACCATAGTTTATTTATCCATTCAGCTGCTAAAGGTTGCTTCCAAGTTTGGACAATTATTAATAAAGCTGCTATTACAAGTTTTTGTGTGGACAAGTTTTCAGCTCATTTGAGTAAATACCAAGGCGCATGATTGCTGTATCATATGGTAAGTATATGTTTAGTTTTATAAGACCTCAACAACCTGTCTTCAAATTGGCTGTACCATTTTGCATTCCTACCAGCAATGAATGGGAGTCCCTGTTGCTCTACGTGCTAATCAACATTTAGTGTTGGCAGTGTTTCGGATTTCGGTTATCCTAGTAAGTGAGTAGGGATATCTCATTGTTGTTTCCATTTGCATTTCCCTGATGACATATGATGTTAAACATCTTTTTATATGCTTACTTGTCATCTGTATATATTATTTGATGAAGTGTCTGTTCAGGTCTTCTGCCCATTTTTCAATCAGGTTGTTTGTTTTCTGATTGTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAGGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAATCTGATTGTTGATAGTAAGAGTTCTTTGTATATTTTTTATGGCAATCCTTCATCAGTGGTATCTTTTGAACTATTTTCTTTCAGTCTGCAGTTTGTCTTTTCATTTTCTTTTGTATATTTTTTATGGCAATCCTTCATCAGTGGTATCTTTTGAACTATTTTCTTTCAGTCTGCAGTTTGTCTTTTCATTTTCTTGGTGTTGTCTTTCTCAGAGAAGAAGTTTTTAATTTTACTGACATCAGCTTATGTATCTTGTCACTGGTGTTTCATCTAAAAAGTCCCCATCATACCCAAGTTAATCTATGTTTTCTCCTATGTTATCTTCTAAGAGTTTTATAGTTTTGCATTTTACATTTAGATCTGTAATCCATTTTGAGTTATGTTTTGTGATGGATGTAATGTCTGCATATAGATACTTTTTTATGCAGATGTCTAGTTGTTCCAGCAGCATTTGTTGAAATGATTTTCTTTACTTCATTGTATTGCCTTTGCTCCTTTATTAAAAATGAGTTGACTATATTTATTATTATTATTACTTAAAATTGAAAATTGTCTTGAAAATTACATGCAGACACAAACACACATTACCTATGTGTTCTGTTTCTCTATATCTCTAATCTGTCTGTTTATTAATTCATCTAGTAGATATTTATTTGTGTTTTTTTAAGGTTGTTAAATGGTTGTACTCTTTAGTAAATTTCATTATTTCTTAATCTGGCATGTAAGATATCTTTTCATGTGGTAATAATATTTCCCACCTACTCTGCAAGTACCTTTCTGAACCTTTTCTACTATTTTTATTCCATCCAAATTGGATTTCTCACTATCATAAATCCAGCTCATCCTTTGTTTCTTTTAGCATTTTTATATTATTTTTCTTACAAATAATTCCTTTCTCTATCCCTTCTGCTATCAATATTCTATTTATTTTTTCTGAAGTTCTTTGTAACATACTAATTATATACTACAACTTGCTTCTTAATCTTTTGCTATTATCTTCATTTTCAAACAACTTTTCATTGATCTCAGTTTACAGATTTTACTCAATGATGTAATAATTTATTCCTCATTTGAAAGATAAAAATAGTAAGAATACAGGATTTGCCAAAATAATCAGCGAATTCAGTGTCAGTTATGGCATCTGTAAACTGAGGAATCTGCAAATTTTTGGTCTTCATTTATTTACCTATAAATATAAAATAATAATATGTTCTCAAATATTTTAAAAGTTTCCTATGATATACCAATTAGATAAATTAATGTAAATATGATATATGATCTGTAATTCATTGTATGACTCTCAGAAAATATCTGCTTTTGCTCCTGGTCTCTATCTTAAATTAAAAAAGCATAACTGAATGCATTATTTTGAAGTATGCTAGATGTATGTATCTATGTATGCATCTAAAAATTTATAAAAATTATGTTTTCATTAAAATCAAGTACAATATAATGTATGATGCATATGTTTTATAGTGCTATACTAGCTAAATAGTTGTGAAATAGTTGTGAAATGCTTAATGCTTAAAAAGTTACTCTTTTATTGGTTTACTATTTTAATTTAAATGTACATGTACCAAAAATATACTACTGGCTCATGATTGCATCATGTTTAAAGGTTTTAAATCTTTATTTTCAGTAGTAGATTTTCTAGGTGTATATAAATTAGTTTTGTACTGAAAATCAAGATCTTTTAGGAAAATTTACACAAATTCAATATTTTTGGGGAAATAAAAAGATTAAAATCTTCAAAGCTAGATTTCATAAAAATATAATTTATTAATAGAATATTTCTGGTACGTATCAATAGAACATCTCATGAAAACAAGCATGACATAATGTTGAAAGTGAGAATAATCATATTTGAACTAGAATCATATTTTGTTATAAGAATTTATTCAAAAAAATTAAACAAAGATGAAAACACTTTTCTTTAAATTTAATTAAGATAAATTCAGGAATTCATAAAGATAACTCTAATATGTCTATTTACATGTGTTGAGTATATATTTGTAACCATAATTTAATAACATTTGATTTTTGTGAACTTATGGAATATATGTAATTGCCTTGGAATCATGGTTCATATACCTCACTCCACTCACAAATGTGTGTGTATTATATCTACTTTGATATAAGACAGATTATTTTATTATTATATAAAAATGGTTTTTAATAACAAAGATAATTCTAAATATCTCTTTTTTCCTAATCATGTTCTTCTGAAATCATACAATGCAATAGATGTTGTGCAACTGATTTATTTTAGCTATCTAGTCCTTTTATTTTCATATAAATCGAGAATATAAGCAAAAGTCCATGTGCATACAAAGAAGAGCTGCATCTTCTTGGCATTTCTATGGTTAGTTTCAGCCTTTTATATTAAACAGTGGTTGAAATCACATTCTTGATGGGAAGTATCTTGGTAGGATGTTAAAAGGCTATATTGTGCTCTTATTTTATTTTTTAAAAATTAGTAGTTTAAACATTGAACAGTCTTTTTCCCTACTTAACATTATTCCAGGCATAAAGTTTCTTCATAGCATAGCTTACAGTAAGCCAAAACAGTAACCATAGCAAATGTTAAAGAATTGGGCTTAAATACTTTTAAGTAGCTACTTTTTTTCAATTTAAGGTATGAGGTTCATTTCAAATCATGTGAAACATATAAACGATATTATTGCATAGATACCTGATTTAGTTTTCTTGTCTGAAAAGAAAAAACTGCAACTTCATTCAATACCACTGAAAGGACAAATTCCATTCTTATCATTTTAATTAAGCTACAACACTTAAGGAGGCCGGGCTTATTTTATGTCCAGAATAGTTGTTCATTTCTGTACCTCTATAATAATTTGAGATAGGTTAAAGCAAATAAAGGAATAGGATTCAAGGCTTGGCTAAGTCATTTTATGAGAAGTTATGATAAAATCTCTTGGTCACCATGGTTCATTGAAAACCCAGGCATAGAGAATTTCATCTTTTATATACCATTCATAAATTGGATTTTTTTTAAGGTTTGGGGGTCTGATATCCTTTTATGTCAAATGTATTTGTGGTAATTGTATTAGCAAGAAATTTGGAGAAGATATTACTGTCATTAGTAAAGATATAGCCAGTGGCCAGGTGCAGTGGCTCACTCCTGTAATCCCAGCACTTTGGGAGGCAAAGACAGGAGGATACGTTGAGCTCAGGAGTTTGATACCAGCCTGGGCAATATGGTGAAACCCTATTTCTACAAAAATTAGAAAAATTAGCCTGGCAAGATGGTATGCACCTGTAGTCCCAGTACTCAGGA	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3962:HG2_10X_allpass_840:HG4_PB_pbsv_5152:HG2_Ill_MetaSV_3784:HG3_10X_allpass_1038:HG2_Ill_tnscope_575:HG4_PB_SVrefine2PBcRDovetail_2609:HG3_PB_pbsv_4977:HG3_PB_SVrefine2PBcRDovetail_2350:HG3_PB_SVrefine2Falcon1Dovetail_3158:HG3_Ill_SVrefine2DISCOVARDovetail_3987:HG3_Ill_GATKHCSBGrefine_3494:HG2_PB_pbsv_5115:HG2_PB_assemblyticsPBcR_19764:HG2_PB_SVrefine2PBcRplusDovetail_8473:HG2_PB_SVrefine2Falcon1plusDovetail_9112:HG2_Ill_breakscan11_717:HG2_10X_SVrefine210Xhap12_3754:HG3_PB_assemblyticsfalcon_20352:HG2_PB_assemblyticsfalcon_20428:HG4_Ill_Krunchall_7685:HG3_Ill_Krunchall_7280:HG2_Ill_Krunchall_7390:HG3_Ill_MetaSV_3961;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3754:HG2_Ill_breakscan11_717:HG2_PB_SVrefine2Falcon1plusDovetail_9112:HG2_PB_SVrefine2PBcRplusDovetail_8473:HG2_PB_assemblyticsPBcR_19764:HG2_PB_pbsv_5115:HG3_Ill_GATKHCSBGrefine_3494:HG3_Ill_SVrefine2DISCOVARDovetail_3987:HG3_PB_SVrefine2Falcon1Dovetail_3158:HG3_PB_SVrefine2PBcRDovetail_2350:HG3_PB_pbsv_4977:HG4_PB_SVrefine2PBcRDovetail_2609;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0420209;ClusterMaxSizeDiff=0.0420209;ClusterMaxEditDist=0.0420209;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-5014;DistBack=1448;DistForward=36639;DistMin=1448;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:172374412-172379426;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2983.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:47:87:0|1:40:1:2:46:./.:0:0:0:0:0/1:69:9:0/1:322:169:5038:.:.
chr4	172520516	HG2_Ill_SVrefine2DISCOVARplusDovetail_9937	ATTGATTTCATGAGTAGTTTCTCATTTAAAATGCTAAAATGTAAAACCTTTTCATGTGGTTGATTTCATGAGTAGTTTCTCATTTAAAATGCTAAAATGTAAAACCTTTTCATGTGATTGATTTCATGAGTAGTTTCTCATTTAAAATGCTAAAATGTAAAACCTTTTCGTGTGG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_5153:HG2_PB_pbsv_5116:HG4_PB_SVrefine2PBcRDovetail_2610:HG4_Ill_SVrefine2DISCOVARDovetail_3922:HG4_Ill_GATKHCSBGrefine_3679:HG2_PB_SVrefine2Falcon2Bionano_2482:HG2_Ill_SVrefine2DISCOVARplusDovetail_9937:HG2_Ill_GATKHCSBGrefine_3519;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3519:HG2_Ill_SVrefine2DISCOVARplusDovetail_9937:HG2_PB_SVrefine2Falcon2Bionano_2482:HG4_Ill_GATKHCSBGrefine_3679:HG4_Ill_SVrefine2DISCOVARDovetail_3922:HG4_PB_SVrefine2PBcRDovetail_2610;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00574713;ClusterMaxSizeDiff=0.00573066;ClusterMaxEditDist=0.0229885;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-174;DistBack=-215;DistForward=-130;DistMin=-215;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=120;REFWIDENED=4:172520500-172520793;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2984.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:27:0|1:48:1:2:23:./.:0:0:0:0:0/1:34:19:./.:.:.:.:.:.
chr4	172988640	HG2_PB_assemblyticsPBcR_19771	TCTACTTGGCCTCTGCACTTGGACATCTAATTGGGAATTCAAACTTAGTGTGGTCAAAGCAGATGTCTTGATGTCCACCCCATCCCTCTCTTATCCTTAGCAAAGTTGTTCAGGACAAAAATATAGGAATCATTTTAATTTCCATGTTTCATATATCTATTACCTAAATATCCAACTTTAACTTTCACTGTTACCCACACAATGGGTGGGTTCTATCCTTTGGTGAGTGACAGTCCAATGATCATTACCAAGGAAAATTTAACAAGGAGATTTTATTACCTGCAAGTAAGGAGGGCACCCAGGTTAGCTGCTAAAGCAGTGCCTTCCTGACCAAAGGTGAAAACAGAGCTTTCATTGGGCTGATTAGTTGAGCCATTGCATGTAGAAGTGGAGTAAAGGCAGCAGAGGCTCAGTCACCAGTCATGCTTGTTCATGCTTTGCATGTATTGAAAATGGTGAATCAGTTCCTCTTGGGGTGGGGGTGTTAGTATGGTAATGCTGAGTTCACCAAAGTTTATCTCCAACTCTGACATCTCTGGATCCAACAGGTTTTTGTTGTTGTTGTTGTTTTTCCTGGACTGTGCTTCTTCCTGGAACTTTTGAAACTACAAAATCTCAGGGTGAAACAATTACCAGTGGGTAGATTTATACAGTGTGTACCTGAAAACCCAGGGACCCTGGGTTACCTCGCCAACACCACCTCTGAAACATGTTCTGAAAGTGTCTACTTTTTTCCCTCCTCACTATCCGCACCCTAGCTCAAGCTACCTCTACTACTTCGTCTTCTCTAATAGCTTCTTAATATACTATAGTAGCTTCCCTGCTTTATGTGTTCCAAACATACTCTATCAGTCTCAGAATGAAATCTAGGCACCATGCTTGCTGCATGATCTGCTTTCTGGCTTCTGCCTGATGTTATCGCATGTTCTCTTTCTTAAGTTCTATGTTCTAATCTCCAATTTATAGAACATGCTGATCTGTTTCTTGCATTCAGGCCTCTGCATTCACTGTTTCCTCTCTCTAAATTAGAATGTTCTTTTGTGCCCTACGAGTCCTGTGAATGTTTATCTCCTCCTATGAAAGGACTTTCCCCCACTTTAATTCTCAGTACTTCACTTCCTCCAGTCGCTCTTTATTCCATCACTCTAGTTTGTTCTTTTTTACACATTAATAGACACAATGTGAATCTGCTTACTAATCTGCCCAGCCCTCTCCTTTATATTGTAAATTCCATTTCAGCAATGGCTTTGTTAGTCTTCCTCACTCTTGTATGCACAGCAGTTAGTAAAGATACTTTTGTGAAAGAATAAATGAAATTCCTTTACCCTTGAACGTGTAGAGCTCATTGAAGTCTTCTAACTTTATTCCCTAACATGGATATTTTACAAGGAGCATCTTTTAGCAGGCTTTGTAAGCAGTTTGGTGCCTGCATTCTTGTTCTGACTTTGTTCATCCATCTCTCTTGGCAGCACAAATCAGGGACAAGGAATCCCTCGTCTCCTCCTGCAGAAATGTCAGGTTTGGTTTGGTTGTCATCCACAGATTTTTATTTATTCCAGCACACACTGATGGGCTAATGGGCCTCCTAAAGAGACTCAGCAGAAATTCTCCCTTCCAGCTGGAGACTGAAGAACTCTGGCTTAAATGAGGAGAAATCCTTGACAATGTTATTGCTAGATAAACTTTTATCCTGAATATGCAATTTTTTCCTATGTATTGATAACCTAGGTCATTAAAGATGATTAATGTCTGCCATATTCCACCAGCATTTAGAACAATTCTTAAAACCAGTTATAGTGGCACTAAAATTCATTCATCCAGCATTCAGCATAAAAGAGATTCTTTAAAATTAACAAATCAATTATAAATATATGTAGTGTGTATATATATGTGTGTGTACATATGTGTTATATATAACACATATATGTTATATATAACACACATATAACATATATATGTAATATATAACACACATATAACATATATGTTATATATAACACATATGTTATATGTATAACACATATATGTTATATGTATAACACATATATTATATATAACACATATATGTTATATATAACACATATATGTTATATATTATATATATAACACATATATGTTATATATATATAACATATATATATATCCTAAATTTCCTCATACATAGTATCTGACAACATATGTGTAATTTCTGCAGGAACAAGTAAGCCATAAATGGTGCTAGACACCTCATCCACAAAATTCCACTTAGAAGATTTGATATTTGCCTTGAGTTATTTAATCATTCCATAATAGTTGAAAATGTACTCTATGGCAGGCACAGTTCTGGGTGCCAGAATCTGATATGGACAGACAAGAAAACACACCTGCTTTCCTAGTTGTTCGGGGAAAAGTATAATAGGGAAATAAACCAGTACATTTATATTCATTATGTGATGCTAAGCCTTATGAAGAAAATCAGCTGGGTAAGAAGGTAATAGAAAAAGGGTGAACAGAGCATTGTATTCTCAATGGGTTGCCTCTCTGGCCTCTTCGATAAGGTAGTATAGGAAAATGTGAGCTATGGAGTCATCTTGTGGAGAACATTCCCAGCAGGAGAAATAGTAATGTCGCTGTTTTGCTATTCTAGAAGTGGTGTGTTCTGAAAACGGAAAGGATGCATTCTGGCTGGAACAAAAAGATGAGATAACAATTTTGTTTTCAAATCATACTATTGTTCATAGCTGCTTATTGGCATTTCAGATTTGGGAATTTGTGGGTTACTTGATTAGAAAGACATGGGAAATCAAGGACAAGGTTAAACAACAAGAGAAAGAAATTAGAGTTCAATAAAGCAAAAACAGAACAGTGGAAGATGATTTAATAGTGTTATGATTTGAATATGTCCCCCAAAAGTTAAGGTGTTGGCAACTTCATCCCTCTGCTCTTATGAATGGATTAATGTCAGTTTTATCCTTATGAATGGATTAATGTCAGCTCTACCTTCAAGAATGAATTAATGGATTAATGTCACTGTCACAGGAGTGAGTTTGTTATATAAGCCAGCTCTGTCTGGCTCTCTTTCTCTTGCCTATTTGCCACATGATCCCCCACACCACGTTATGACACAGCACAAAGGCCTTCACCAGATGCCAACACCATGGACTTGGACTTCCCAGTTCCCAGAACTATGAGCTAAATACACTTTTGAAAAAAATAAATTACCCAGTCTGTGATAGTCTGTTATAGCAACAGAAAACAAAGTAAGACAGATAGTAAAAAAGATCTCTGTTAATTCATGTTCTAGAAAGGATAAAATATACTTCTAAAAGTATATTACTGAAAGCACTGTTTCTGTGATGACGCCTTCAAAAAATCATTGACTGGAAAACAAGTTTGATATATGCTTTGCTATGGTGACTATAGAATAATATTATTTTATACTATATCCAGACATATGAGAGGTATAAAAATAAATACTAATATAAAAAATACTAAGTTAGTTGTGTTGATCCCAGAATCACAGAAACTTATTTAATCACAGAAGGTTTTACACATGTAATACATTTTGAAAACAATTGCCTCAGAAGTAAGAGTCAGATCTGATGTAGCGAGGTGAAGACTGACTAATGAAGGTGAAAATTGTACTATAGTAAAAAAAAAGATCCAAATGCAATGGCTTAAATATAATGAGACATAGTTAGACTCAATGACATGAAGTTATCCAGGTACCAAGGCTAGCATGGATGAAGTGGATGGTTGAGGGTGGAGGATGGTCAGCTCTCTCATCAACGTGTGGTTTTCAAGGATTGTGCTATTACTCATTACCTCTCAGCTGAGCCTCATCAACATTGGATACCAGCATTTTTCTTTGCTGTGTCCTGAAAGAAGAGTTTAATTATTGTTCATTTCTACACTGATGATAAATGTGTGCCATCGTTATTAAAACATTATCCTGTCAGAACCCCTGTGTCTTACGTTAGCTTGTCTCATGTTCCTTGTACCCTACAATGTCACAAAAAACAAAGCTCAAGATCAAGTATGGCAAATTCCCTTCAGTTGTAAAACCCTTTTGGTGTTCTGCTTTTCTCATTGGGTTCCACATTTAGTGTGTTTTGTTTGTTTGTTTATTTGTTTTTTCCTTATTTCTGGTCAGCCCATCAATGCATTTAAGGTAGTGTTTGTTGTATATAAATAAATTCAATTAGGAAAAAGGAAAAGCTATTTATTCAGAGCTTGCTAGTGCAAGGGAGTCAGCAATAGTATCTTGCATTTTGGCAGAGACTCAAATGCAGGCGGAAGAGTGGGAAAGCTTT	C	20	PASS	ClusterIDs=HG4_Ill_MetaSV_3963:HG2_PB_pbsv_5119:HG4_PB_pbsv_5156:HG4_Ill_GATKHCSBGrefine_3682:HG3_Ill_GATKHCSBGrefine_3495:HG2_Ill_GATKHCSBGrefine_3523:HG2_Ill_tnscope_576:HG2_Ill_SpiralSDKrefine_12973:HG4_PB_assemblyticsfalcon_19967:HG4_PB_SVrefine2PBcRDovetail_2611:HG4_PB_SVrefine2Falcon1Dovetail_3122:HG4_Ill_SVrefine2DISCOVARDovetail_3925:HG3_PB_assemblyticsfalcon_20358:HG3_PB_SVrefine2PBcRDovetail_2351:HG3_PB_SVrefine2Falcon1Dovetail_3160:HG3_Ill_SVrefine2DISCOVARDovetail_3994:HG2_PB_assemblyticsPBcR_19771:HG2_PB_SVrefine2PBcRplusDovetail_8474:HG2_PB_SVrefine2PB10Xhap12_3712:HG2_PB_SVrefine2Falcon2Bionano_2483:HG2_PB_SVrefine2Falcon1plusDovetail_9113:HG2_PB_PB10Xdip_21693:HG2_Ill_SVrefine2DISCOVARplusDovetail_9940:HG2_10X_SVrefine210Xhap12_3759:HG2_PB_HySA_9667:HG4_10X_allpass_995:HG3_PB_pbsv_4980:HG3_10X_allpass_1039:HG2_Ill_breakscan11_718:HG2_10X_allpass_841:HG2_Ill_MetaSV_3785:HG2_PB_assemblyticsfalcon_20434:HG3_Ill_MetaSV_3963:HG4_Ill_Krunchall_7696:HG3_Ill_Krunchall_7291:HG2_Ill_Krunchall_7403;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3759:HG2_Ill_SVrefine2DISCOVARplusDovetail_9940:HG2_PB_PB10Xdip_21693:HG2_PB_SVrefine2Falcon1plusDovetail_9113:HG2_PB_SVrefine2Falcon2Bionano_2483:HG2_PB_SVrefine2PB10Xhap12_3712:HG2_PB_SVrefine2PBcRplusDovetail_8474:HG2_PB_assemblyticsPBcR_19771:HG3_Ill_SVrefine2DISCOVARDovetail_3994:HG3_PB_SVrefine2Falcon1Dovetail_3160:HG3_PB_SVrefine2PBcRDovetail_2351:HG3_PB_assemblyticsfalcon_20358:HG4_Ill_SVrefine2DISCOVARDovetail_3925:HG4_PB_SVrefine2Falcon1Dovetail_3122:HG4_PB_SVrefine2PBcRDovetail_2611:HG4_PB_assemblyticsfalcon_19967;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0198523;ClusterMaxSizeDiff=0.0198523;ClusterMaxEditDist=0.0198523;PBcalls=17;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-4291;DistBack=0;DistForward=66732;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:172988640-172992931;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=0.9998;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2985.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:115:1/1:0:26:0:27:./.:0:0:0:0:1/1:0:27:1/1:1:315:4406:.:.
chr4	173176433	HG2_Ill_Krunchall_7404	TTTCATTGACATTTATTTTTTAAATCACTGTGCTGAGAAGTAGACAGAAAAATCA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_377:HG2_PB_PB10Xdip_21694:HG4_PB_assemblyticsfalcon_19968:HG3_PB_assemblyticsfalcon_20360:HG2_PB_assemblyticsPBcR_19772:HG4_PB_pbsv_5157:HG4_PB_SVrefine2PBcRDovetail_2612:HG4_PB_SVrefine2Falcon1Dovetail_3123:HG4_Ill_svaba_6743:HG4_Ill_scalpel_5002:HG4_Ill_manta_1296:HG4_Ill_SVrefine2DISCOVARDovetail_3926:HG4_Ill_Krunchall_7698:HG4_Ill_GATKHC_8703:HG4_Ill_GATKHCSBGrefine_3683:HG4_Ill_Cortex_2803:HG4_Ill_250bpfermikitraw_7290:HG4_Ill_150bpfermikitraw_6975:HG4_CG_vcfBeta_3433:HG3_PB_pbsv_4982:HG3_PB_SVrefine2Falcon1Dovetail_3161:HG3_Ill_svaba_6746:HG3_Ill_Krunchall_7293:HG3_Ill_GATKHC_8660:HG3_Ill_GATKHCSBGrefine_3496:HG3_Ill_Cortex_2809:HG3_Ill_250bpfermikitraw_7007:HG3_Ill_150bpfermikitraw_6845:HG3_CG_vcfBeta_2935:HG2_PB_pbsv_5120:HG2_PB_SVrefine2Falcon2Bionano_2484:HG2_Ill_svaba_6616:HG2_Ill_manta_1466:HG2_Ill_breakscan11_719:HG2_Ill_SpiralSDKrefine_12974:HG2_Ill_SVrefine2DISCOVARplusDovetail_9941:HG2_Ill_Krunchall_7404:HG2_Ill_GATKHC_8637:HG2_Ill_GATKHCSBGrefine_3524:HG2_Ill_Cortex_6680:HG2_Ill_250bpfermikitraw_7233:HG2_Ill_150bpfermikitraw_6754:HG2_CG_vcfBeta_3041:HG2_10X_SVrefine210Xhap12_3760;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3760:HG2_CG_vcfBeta_3041:HG2_Ill_150bpfermikitraw_6754:HG2_Ill_250bpfermikitraw_7233:HG2_Ill_Cortex_6680:HG2_Ill_GATKHCSBGrefine_3524:HG2_Ill_GATKHC_8637:HG2_Ill_Krunchall_7404:HG2_Ill_SVrefine2DISCOVARplusDovetail_9941:HG2_Ill_SpiralSDKrefine_12974:HG2_Ill_breakscan11_719:HG2_Ill_manta_1466:HG2_Ill_svaba_6616:HG2_PB_SVrefine2Falcon2Bionano_2484:HG2_PB_pbsv_5120:HG3_CG_vcfBeta_2935:HG3_Ill_150bpfermikitraw_6845:HG3_Ill_250bpfermikitraw_7007:HG3_Ill_Cortex_2809:HG3_Ill_GATKHCSBGrefine_3496:HG3_Ill_GATKHC_8660:HG3_Ill_Krunchall_7293:HG3_Ill_svaba_6746:HG3_PB_SVrefine2Falcon1Dovetail_3161:HG3_PB_pbsv_4982:HG4_CG_vcfBeta_3433:HG4_Ill_150bpfermikitraw_6975:HG4_Ill_250bpfermikitraw_7290:HG4_Ill_Cortex_2803:HG4_Ill_GATKHCSBGrefine_3683:HG4_Ill_GATKHC_8703:HG4_Ill_Krunchall_7698:HG4_Ill_SVrefine2DISCOVARDovetail_3926:HG4_Ill_manta_1296:HG4_Ill_scalpel_5002:HG4_Ill_svaba_6743:HG4_PB_SVrefine2Falcon1Dovetail_3123:HG4_PB_SVrefine2PBcRDovetail_2612:HG4_PB_pbsv_5157;NumExactMatchSVs=39;ClusterMaxShiftDist=0.24;ClusterMaxSizeDiff=0.24;ClusterMaxEditDist=0.24;PBcalls=11;Illcalls=29;TenXcalls=1;CGcalls=3;PBexactcalls=7;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=3;HG2count=18;HG3count=11;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-54;DistBack=36082;DistForward=-16;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:173176434-173176489;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2986.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:33:0|1:31:0:1:31:./.:0:0:0:0:0/1:21:32:./.:.:.:.:.:.
chr4	174531639	HG3_PB_SVrefine2PBcRDovetail_2358	TATGGTGGTTTGCTGCACCAACAACCATCATCTACATTAGGTATTTCTCTTAATGCTATCCCTCCTCTTGCCCCCCACCCCCTGACAGGCCCTGGTGTGTGATGTTCCCCTCCCTGTATCCATGTGTTCTCATTGTTCAACTCCCGCTTATGAGTGAGAACATGCGGTCTTTAGTTTTCTGTTTCTGTGTTAGTTTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCTGCAAAGGACTTGAACTCATCCTTTTTATGGCTGCATAGTATTCCATGGTGTATACGTGCCACATTTTCTTTATCCAGTCCATCATTGATGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAACAGTGCTGCAATAAACATACATGTGCATGAGTCTTTATAGTAGCATGATTTATAATCCTTTGGGTATATACCCAATAATGTGATTTCTGGGTCAAATGGTATTTGTGGTTCTAGATCCTTGAGGAATCGCCACACTGTCTTCCACTATGGTGGAACTAATTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCTGCATCCTCTCCAGCATCTGTTGTTTCCTGACTTTTTAATGATTGTATTCTAACTGGCATAAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTAATGACCAGTGATGATGAACTTTTTTTCATATATTTGTTGGCCGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTTGTCCACTTTTTGATGGGGTTGTTTTTTTCCTGTAAATTTGTTTAAGTTCTTTGTAGATTCTGGATATTAGCCCTTTGTCAGATAGAAAGATTGCAAAAATTTTCTCCCATTCTGTAGGTTGTCTGTTCTCTCTGATGATAGTTTCTTTTGCTCTGCAGAAGCTCTTTAGTTTAATGAGCTCTCATTTGTCTATTTTGGCTTTTGTTGTCGTTGCTTTTGGTGTTTTAATCATGAAGTCTTTGCCCATGCCTATGTCCTGAATGGTATAGCCTATGTTTTCTTCTAGGGTTTGTATGGTTTTAGGTCTTATGTTTAAATCTTTAATCCATCTTGAGTTAATTTTTGTATAAGGTGTAAGGAACGGGTCCAGTTTCAGTTTTCTGCATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGAAATCCTTTCCCCATTGCTTGTGTGTGTCAGGTTTGTCAAAGATCAGATGGTTGTAGATGTGTGGTATTATGTCTGAGGCCTCTGTTCTGTTCCATTGGTCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTTGTATAGTTTGAAGTCAGTTAGTGTGATTCCTTCAGCTTTATTCTTTTTGCTTAGGATTGTCTTGTCTATATGGGCTCTTTTTTGGTTCCATATGAAATTTAAAGTAGTTTTTTTTTCTAATTCTGTGAAGAAAGTCAGTGGTAGCTTGGATGGAGATTAGCATTAAATCTATAAGTTACTTTGGTCAATATGGCCATTTTCACAATATTGATTCTTCCTATACATGAGCATGGAATGTTTTTCCATTTGTTCATGTCAGCTCTTATTTCCTTGAGAAGTGGTTTGTAATTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGTATTCCTAGGTATTTTATTCTCTTTGTAGCAATTGTGAATGGGCGTTCACTCATGATTTGGCTCTCTATTATTGCTGTATAGGAATGCTTGTGATTTTGCACATTGATTTTATATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTGGGGTTGATACGATGGGGTTTTCTAAATATACAATCATGTCATCTGCAAACAATGACGATTTGACTTTCTCTCTTCCTATTTGAATACCCTTTATTTCTTTCTCTTGTCTGATTGCCCTGGCCAGAACTTCCAATGCTATGTTGAATAGGAGTGGTGAGAGAGGGCATGTTTGTCTTGTGCCAGTTTTCAGAGGGAATGCTTTCAGCTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAAATGGCTCTTACTATTTTGATATATGTTCCATCAATACCTAGTTTACTGAGAGTTATTAGCATGAAGCGGTGTTGAATTTTATCAAAGGACTTTTCTGCATGTATTGAGATAATCATGTGGTTTTTGTCATTGGTTCTGTTTATGTGATGGATTATGTTTATTGATTTGCATATGTTGAACCAGCCTTGCATCCCAGAGATGAAGCAGACTTGATCCTGGTGGGTAAACTTTTTGATGTGCTGCTGGATTCCATTTGCCAGTATTTTATTGAGAATTTTTGCATCGATGTTAATCAGGGATATGAGACTGAAATTTTCTTTTTTTGTTTTGTGTCTGCCAGGTTTTGGTATCAGGATGATGCTGGCCTCATAAGATGAGTTAGAGAGCAGTCCCTCTTTTTCTATTATTTGGAATAGTTTCATAAGGAATGTTACCAGTTTCTCTTTGTATCTGTGGTGGAATATGGCTGTGAATCCATCCGGTCCTGGGCTTTTTTCGGTTGGTAGGCTATTAATTACTGCCTCAATTTGAGAACTTGTTATTGGTCAATTCAGGGATTTGACTTCTTCCTGGTTTAGTCTTGAGATGGTGTATATGTCCAGGATTTTATCCATTTCTTCTAGAATATCTAGTTTATTTGGGCAGAGGTGTTTATAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCAGTGGTGATATCCCCTTTGTCATTTTTTTAAATTATACTTTAAGTTCTAGGGTACATGTGCACAACATGCAGGTTTGATACATAGGTATACATGTGTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3765:HG2_PB_pbsv_5129:HG3_10X_allpass_1042:HG2_10X_allpass_842:HG2_PB_HySA_9688:HG3_Ill_MetaSV_3967:HG2_Ill_SpiralSDKrefine_12980:HG2_Ill_MetaSV_3787:HG2_Ill_tnscope_577:HG3_PB_SVrefine2PBcRDovetail_2358:HG3_PB_SVrefine2Falcon1Dovetail_3168:HG3_Ill_SVrefine2DISCOVARDovetail_4001:HG2_PB_SVrefine2PBcRplusDovetail_8478:HG2_PB_SVrefine2PB10Xhap12_3717:HG2_PB_SVrefine2Falcon2Bionano_2489:HG2_PB_SVrefine2Falcon1plusDovetail_9118:HG2_Ill_SVrefine2DISCOVARplusDovetail_9947;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3765:HG3_PB_SVrefine2PBcRDovetail_2358:HG3_PB_SVrefine2Falcon1Dovetail_3168:HG3_Ill_SVrefine2DISCOVARDovetail_4001:HG2_PB_SVrefine2PBcRplusDovetail_8478:HG2_PB_SVrefine2PB10Xhap12_3717:HG2_PB_SVrefine2Falcon2Bionano_2489:HG2_PB_SVrefine2Falcon1plusDovetail_9118:HG2_Ill_SVrefine2DISCOVARplusDovetail_9947;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0488675;ClusterMaxSizeDiff=0.0488675;ClusterMaxEditDist=0.0920982;PBcalls=8;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-2845;DistBack=9801;DistForward=-1272;DistMin=-1272;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1577;REFWIDENED=4:174531640-174536061;PctSeqSimilarity=0.9449;PctSizeSimilarity=0.9975;PctRecOverlap=0.4998;SizeDiff=-7;StartDistance=-1420;EndDistance=-1427;GTMatch=0;TruScore=81;MatchId=2987.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:47:21:0|1:42:0:3:17:./.:0:0:0:0:0/0:76:0:0/1:261:65:2730:.:.
chr4	175186387	HG3_Ill_GATKHCSBGrefine_3500	ATAAAAGCTTTTTATTTAGGTATTTACCTAATTAAAAGCTTTTTATTTAGGTATTTACCTAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3767:HG2_PB_HySA_9693:HG3_PB_pbsv_4996:HG4_PB_HySA_7713:HG3_PB_HySA_7959:HG4_Ill_svaba_6760:HG4_Ill_Krunchall_7712:HG4_Ill_GATKHCSBGrefine_3688:HG4_Ill_250bpfermikitraw_7304:HG4_Ill_150bpfermikitraw_6992:HG3_Ill_svaba_6762:HG3_Ill_Krunchall_7313:HG3_Ill_GATKHCSBGrefine_3500:HG3_Ill_250bpfermikitraw_7025:HG2_Ill_svaba_6630:HG2_Ill_SpiralSDKrefine_12984:HG2_Ill_GATKHCSBGrefine_3528:HG2_Ill_250bpfermikitraw_7248:HG2_Ill_150bpfermikitraw_6771:HG2_PB_pbsv_5131:HG4_PB_pbsv_5166:HG4_PB_SVrefine2PBcRDovetail_2618:HG4_PB_SVrefine2Falcon1Dovetail_3128:HG4_Ill_SVrefine2DISCOVARDovetail_3932:HG3_PB_SVrefine2PBcRDovetail_2361:HG3_PB_SVrefine2Falcon1Dovetail_3169:HG3_Ill_SVrefine2DISCOVARDovetail_4004:HG2_PB_SVrefine2PBcRplusDovetail_8479:HG2_PB_SVrefine2PB10Xhap12_3719:HG2_PB_SVrefine2Falcon2Bionano_2491:HG2_PB_SVrefine2Falcon1plusDovetail_9119:HG2_Ill_SVrefine2DISCOVARplusDovetail_9951;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6771:HG2_Ill_250bpfermikitraw_7248:HG2_Ill_GATKHCSBGrefine_3528:HG2_Ill_SpiralSDKrefine_12984:HG2_Ill_svaba_6630:HG3_Ill_250bpfermikitraw_7025:HG3_Ill_GATKHCSBGrefine_3500:HG3_Ill_Krunchall_7313:HG3_Ill_svaba_6762:HG4_Ill_150bpfermikitraw_6992:HG4_Ill_250bpfermikitraw_7304:HG4_Ill_GATKHCSBGrefine_3688:HG4_Ill_Krunchall_7712:HG4_Ill_svaba_6760;NumExactMatchSVs=14;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.047619;PBcalls=14;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-62;DistBack=11;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=82;REFWIDENED=4:175186377-175186520;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2989.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:60:1/1:7:28:1:14:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr4	176091074	HG4_Ill_GATKHCSBGrefine_3693	CTTTAGAATAAGTTAACTCCAAAAGGCTAAAAATGGTGATAAAAGAAACAAGAGTACTTCATTCTGTAATCAAACATCCATGACT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3772:HG4_PB_HySA_7724:HG3_PB_pbsv_5003:HG2_PB_pbsv_5139:HG4_PB_pbsv_5174:HG3_PB_HySA_7966:HG4_PB_SVrefine2PBcRDovetail_2625:HG4_PB_SVrefine2Falcon1Dovetail_3134:HG4_Ill_svaba_6768:HG4_Ill_SVrefine2DISCOVARDovetail_3940:HG4_Ill_GATKHCSBGrefine_3693:HG4_Ill_250bpfermikitraw_7313:HG4_Ill_150bpfermikitraw_7000:HG3_PB_SVrefine2PBcRDovetail_2365:HG3_PB_SVrefine2Falcon1Dovetail_3174:HG3_Ill_svaba_6769:HG3_Ill_SVrefine2DISCOVARDovetail_4012:HG3_Ill_GATKHCSBGrefine_3504:HG3_Ill_250bpfermikitraw_7035:HG3_Ill_150bpfermikitraw_6871:HG2_PB_SVrefine2PBcRplusDovetail_8486:HG2_PB_SVrefine2PB10Xhap12_3726:HG2_PB_SVrefine2Falcon2Bionano_2498:HG2_PB_SVrefine2Falcon1plusDovetail_9125:HG2_Ill_svaba_6636:HG2_Ill_manta_1469:HG2_Ill_SpiralSDKrefine_12988:HG2_Ill_SVrefine2DISCOVARplusDovetail_9959:HG2_Ill_GATKHCSBGrefine_3533:HG2_Ill_250bpfermikitraw_7257:HG2_Ill_150bpfermikitraw_6776;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3772:HG4_PB_SVrefine2PBcRDovetail_2625:HG4_PB_SVrefine2Falcon1Dovetail_3134:HG4_Ill_svaba_6768:HG4_Ill_SVrefine2DISCOVARDovetail_3940:HG4_Ill_GATKHCSBGrefine_3693:HG4_Ill_250bpfermikitraw_7313:HG4_Ill_150bpfermikitraw_7000:HG3_PB_SVrefine2PBcRDovetail_2365:HG3_PB_SVrefine2Falcon1Dovetail_3174:HG3_Ill_svaba_6769:HG3_Ill_SVrefine2DISCOVARDovetail_4012:HG3_Ill_GATKHCSBGrefine_3504:HG3_Ill_250bpfermikitraw_7035:HG3_Ill_150bpfermikitraw_6871:HG2_PB_SVrefine2PBcRplusDovetail_8486:HG2_PB_SVrefine2PB10Xhap12_3726:HG2_PB_SVrefine2Falcon2Bionano_2498:HG2_PB_SVrefine2Falcon1plusDovetail_9125:HG2_Ill_svaba_6636:HG2_Ill_manta_1469:HG2_Ill_SpiralSDKrefine_12988:HG2_Ill_SVrefine2DISCOVARplusDovetail_9959:HG2_Ill_GATKHCSBGrefine_3533:HG2_Ill_250bpfermikitraw_7257:HG2_Ill_150bpfermikitraw_6776;NumExactMatchSVs=26;ClusterMaxShiftDist=0.035503;ClusterMaxSizeDiff=0.035503;ClusterMaxEditDist=0.0481928;PBcalls=13;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-84;DistBack=0;DistForward=1;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=88;REFWIDENED=4:176091075-176091246;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2990.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:57:1/1:0:23:3:16:./.:0:0:0:0:1/1:0:32:./.:.:.:.:.:.
chr4	177869318	HG4_PB_SVrefine2PBcRDovetail_2632	TAAAGAACAGGATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_720:HG4_Ill_Krunchall_7743:HG3_PB_pbsv_5013:HG3_Ill_Krunchall_7342:HG2_PB_pbsv_5149:HG2_Ill_Krunchall_7455:HG2_PB_assemblyticsfalcon_20482:HG4_PB_HySA_7756:HG3_PB_HySA_7985:HG2_PB_HySA_9721:HG2_PB_assemblyticsPBcR_19822:HG3_Ill_Krunchall_7341:HG4_PB_pbsv_5183:HG4_Ill_MetaSV_3972:HG3_Ill_MetaSV_3974:HG2_Ill_tnscope_578:HG4_PB_assemblyticsfalcon_20018:HG4_PB_SVrefine2PBcRDovetail_2632:HG4_Ill_svaba_6785:HG4_Ill_manta_1300:HG4_Ill_GATKHCSBGrefine_3701:HG4_10X_allpass_998:HG3_PB_assemblyticsfalcon_20412:HG3_PB_SVrefine2PBcRDovetail_2373:HG3_PB_SVrefine2Falcon1Dovetail_3181:HG3_Ill_svaba_6786:HG3_Ill_scalpel_5232:HG3_Ill_manta_1211:HG3_Ill_SVrefine2DISCOVARDovetail_4020:HG3_Ill_GATKHCSBGrefine_3512:HG3_10X_allpass_1044:HG2_PB_SVrefine2PBcRplusDovetail_8493:HG2_PB_SVrefine2Falcon1plusDovetail_9132:HG2_Ill_svaba_6653:HG2_Ill_scalpel_5123:HG2_Ill_manta_1475:HG2_Ill_GATKHCSBGrefine_3542:HG2_10X_allpass_843:HG2_10X_SVrefine210Xhap12_3779;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3779:HG2_10X_allpass_843:HG2_Ill_GATKHCSBGrefine_3542:HG2_Ill_manta_1475:HG2_Ill_scalpel_5123:HG2_Ill_svaba_6653:HG2_PB_SVrefine2Falcon1plusDovetail_9132:HG2_PB_SVrefine2PBcRplusDovetail_8493:HG3_10X_allpass_1044:HG3_Ill_GATKHCSBGrefine_3512:HG3_Ill_SVrefine2DISCOVARDovetail_4020:HG3_Ill_manta_1211:HG3_Ill_scalpel_5232:HG3_Ill_svaba_6786:HG3_PB_SVrefine2Falcon1Dovetail_3181:HG3_PB_SVrefine2PBcRDovetail_2373:HG3_PB_assemblyticsfalcon_20412:HG4_10X_allpass_998:HG4_Ill_GATKHCSBGrefine_3701:HG4_Ill_manta_1300:HG4_Ill_svaba_6785:HG4_PB_SVrefine2PBcRDovetail_2632:HG4_PB_assemblyticsfalcon_20018;NumExactMatchSVs=23;ClusterMaxShiftDist=0.196891;ClusterMaxSizeDiff=0.196891;ClusterMaxEditDist=0.196891;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=14;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=-564;DistForward=-302;DistMin=-564;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:177869319-177869648;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2991.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:35:0|1:16:0:1:33:./.:0:0:0:0:0/1:30:15:0/1:29:8:.:.:.
chr4	178156827	HG4_Ill_manta_1302	TAAGTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3782:HG2_10X_allpass_844:HG3_PB_assemblyticsfalcon_20418:HG2_PB_assemblyticsPBcR_19828:HG4_PB_assemblyticsfalcon_20024:HG2_PB_assemblyticsfalcon_20486:HG3_Ill_Krunchall_7350:HG4_Ill_Spiral_427:HG4_Ill_Krunchall_7746:HG3_PB_HySA_7993:HG3_Ill_Krunchall_7349:HG2_Ill_Spiral_378:HG2_Ill_Krunchall_7458:HG2_PB_pbsv_5153:HG2_Ill_breakscan11_721:HG4_PB_pbsv_5187:HG3_Ill_MetaSV_3976:HG2_PB_HySA_9730:HG2_Ill_tnscope_579:HG2_Ill_MetaSV_3796:HG4_PB_SVrefine2PBcRDovetail_2634:HG4_PB_SVrefine2Falcon1Dovetail_3143:HG4_Ill_scalpel_5035:HG4_Ill_manta_1302:HG4_Ill_SVrefine2DISCOVARDovetail_3948:HG4_Ill_MetaSV_3974:HG4_Ill_GATKHCSBGrefine_3706:HG4_10X_allpass_999:HG3_PB_pbsv_5017:HG3_PB_SVrefine2PBcRDovetail_2375:HG3_PB_SVrefine2Falcon1Dovetail_3184:HG3_Ill_scalpel_5237:HG3_Ill_manta_1214:HG3_Ill_SVrefine2DISCOVARDovetail_4022:HG3_Ill_GATKHCSBGrefine_3517:HG3_10X_allpass_1045:HG2_PB_SVrefine2PBcRplusDovetail_8495:HG2_PB_SVrefine2PB10Xhap12_3737:HG2_PB_SVrefine2Falcon2Bionano_2506:HG2_PB_SVrefine2Falcon1plusDovetail_9134:HG2_Ill_scalpel_5126:HG2_Ill_manta_1477:HG2_Ill_SpiralSDKrefine_13002:HG2_Ill_SVrefine2DISCOVARplusDovetail_9970:HG2_Ill_GATKHCSBGrefine_3546;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3782:HG4_PB_SVrefine2PBcRDovetail_2634:HG4_PB_SVrefine2Falcon1Dovetail_3143:HG4_Ill_scalpel_5035:HG4_Ill_manta_1302:HG4_Ill_SVrefine2DISCOVARDovetail_3948:HG4_Ill_MetaSV_3974:HG4_Ill_GATKHCSBGrefine_3706:HG4_10X_allpass_999:HG3_PB_pbsv_5017:HG3_PB_SVrefine2PBcRDovetail_2375:HG3_PB_SVrefine2Falcon1Dovetail_3184:HG3_Ill_scalpel_5237:HG3_Ill_manta_1214:HG3_Ill_SVrefine2DISCOVARDovetail_4022:HG3_Ill_GATKHCSBGrefine_3517:HG3_10X_allpass_1045:HG2_PB_SVrefine2PBcRplusDovetail_8495:HG2_PB_SVrefine2PB10Xhap12_3737:HG2_PB_SVrefine2Falcon2Bionano_2506:HG2_PB_SVrefine2Falcon1plusDovetail_9134:HG2_Ill_scalpel_5126:HG2_Ill_manta_1477:HG2_Ill_SpiralSDKrefine_13002:HG2_Ill_SVrefine2DISCOVARplusDovetail_9970:HG2_Ill_GATKHCSBGrefine_3546;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0583717;ClusterMaxSizeDiff=0.0583717;ClusterMaxEditDist=0.0583717;PBcalls=17;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=7465;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=4:178156828-178157166;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2992.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:0:14:0:10:./.:0:0:0:0:1/1:0:26:./.:2:14:.:.:.
chr4	178335931	HG2_Ill_250bpfermikitraw_7281	GGAGGCCAGGAGTTTGAGACCAGCCTAAGCAACTGAGTAAGACCCCCATCTCTACAAAAATAAATAATGATTAACTGGGTGTGGTGGTGGGCACCTGCAGTCTTAGCTACTCAGGAGACTGAGGCGGGAGGATTGCTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3783:HG2_PB_assemblyticsfalcon_20488:HG3_PB_assemblyticsfalcon_20419:HG2_PB_pbsv_5154:HG3_PB_HySA_7995:HG4_PB_pbsv_5188:HG2_PB_SVrefine2Falcon1plusDovetail_9135:HG3_PB_pbsv_5018:HG4_Ill_250bpfermikitraw_7341:HG4_Ill_150bpfermikitraw_7027:HG4_10X_allpass_1000:HG3_PB_SVrefine2Falcon1Dovetail_3185:HG3_Ill_250bpfermikitraw_7062:HG3_Ill_150bpfermikitraw_6898:HG3_10X_allpass_1046:HG2_PB_SVrefine2PB10Xhap12_3738:HG2_Ill_250bpfermikitraw_7281:HG2_Ill_150bpfermikitraw_6799:HG4_PB_SVrefine2PBcRDovetail_2635:HG4_PB_SVrefine2Falcon1Dovetail_3144:HG4_Ill_SVrefine2DISCOVARDovetail_3950:HG3_PB_SVrefine2PBcRDovetail_2376:HG3_Ill_SVrefine2DISCOVARDovetail_4023:HG2_PB_SVrefine2PBcRplusDovetail_8496:HG2_PB_SVrefine2Falcon2Bionano_2507:HG2_Ill_SVrefine2DISCOVARplusDovetail_9972;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6799:HG2_Ill_250bpfermikitraw_7281:HG2_PB_SVrefine2PB10Xhap12_3738:HG3_10X_allpass_1046:HG3_Ill_150bpfermikitraw_6898:HG3_Ill_250bpfermikitraw_7062:HG3_PB_SVrefine2Falcon1Dovetail_3185:HG4_10X_allpass_1000:HG4_Ill_150bpfermikitraw_7027:HG4_Ill_250bpfermikitraw_7341;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0289855;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.0656934;PBcalls=14;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-137;DistBack=22175;DistForward=-7;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=186;REFWIDENED=4:178335926-178336248;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2993.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:67:1/1:3:30:1:24:./.:0:0:0:0:1/1:0:30:./.:.:.:.:.:.
chr4	179956841	HG3_PB_SVrefine2Falcon1Dovetail_3192	TAAGAAAATGTGGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGTGGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3789:HG3_PB_assemblyticsfalcon_20432:HG4_PB_pbsv_5198:HG2_PB_assemblyticsPBcR_19851:HG2_PB_HySA_9756:HG4_Ill_MetaSV_3978:HG4_PB_assemblyticsfalcon_20042:HG4_PB_SVrefine2PBcRDovetail_2643:HG4_PB_SVrefine2Falcon1Dovetail_3153:HG4_Ill_manta_1304:HG4_Ill_SVrefine2DISCOVARDovetail_3957:HG4_Ill_GATKHCSBGrefine_3714:HG3_PB_pbsv_5030:HG3_PB_SVrefine2PBcRDovetail_2385:HG3_PB_SVrefine2Falcon1Dovetail_3192:HG3_Ill_scalpel_5248:HG3_Ill_manta_1219:HG3_Ill_SVrefine2DISCOVARDovetail_4034:HG3_Ill_MetaSV_3979:HG3_Ill_GATKHCSBGrefine_3524:HG2_PB_pbsv_5164:HG2_PB_assemblyticsfalcon_20511:HG2_PB_SVrefine2PBcRplusDovetail_8504:HG2_PB_SVrefine2PB10Xhap12_3747:HG2_PB_SVrefine2Falcon2Bionano_2514:HG2_PB_SVrefine2Falcon1plusDovetail_9144:HG2_Ill_manta_1481:HG2_Ill_SVrefine2DISCOVARplusDovetail_9980:HG2_Ill_MetaSV_3800:HG2_Ill_GATKHCSBGrefine_3557;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3789:HG4_PB_assemblyticsfalcon_20042:HG4_PB_SVrefine2PBcRDovetail_2643:HG4_PB_SVrefine2Falcon1Dovetail_3153:HG4_Ill_manta_1304:HG4_Ill_SVrefine2DISCOVARDovetail_3957:HG4_Ill_GATKHCSBGrefine_3714:HG3_PB_pbsv_5030:HG3_PB_SVrefine2PBcRDovetail_2385:HG3_PB_SVrefine2Falcon1Dovetail_3192:HG3_Ill_scalpel_5248:HG3_Ill_manta_1219:HG3_Ill_SVrefine2DISCOVARDovetail_4034:HG3_Ill_MetaSV_3979:HG3_Ill_GATKHCSBGrefine_3524:HG2_PB_pbsv_5164:HG2_PB_assemblyticsfalcon_20511:HG2_PB_SVrefine2PBcRplusDovetail_8504:HG2_PB_SVrefine2PB10Xhap12_3747:HG2_PB_SVrefine2Falcon2Bionano_2514:HG2_PB_SVrefine2Falcon1plusDovetail_9144:HG2_Ill_manta_1481:HG2_Ill_SVrefine2DISCOVARplusDovetail_9980:HG2_Ill_MetaSV_3800:HG2_Ill_GATKHCSBGrefine_3557;NumExactMatchSVs=25;ClusterMaxShiftDist=0.073132;ClusterMaxSizeDiff=0.073132;ClusterMaxEditDist=0.073132;PBcalls=16;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=12;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=22454;DistForward=5330;DistMin=5330;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=4:179956842-179957172;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2994.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:1:13:0:15:./.:0:0:0:0:1/1:0:34:1/1:2:24:.:.:.
chr4	180063817	HG2_Ill_manta_1482	CCAGCCACCTGGGAGGCTGAGGCAGGAGAATCATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCACGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCCATCTCAATAAATAAATAAGTAAAATAACTTCATGGCTGCTATATGAAAATACAAAGACAAGCAGGCATATTTTTGGCTTTTCAAGAGAGTGAATTGTGGCAGTAGGAGGTAAATGTCCTCTACTATCTCTTCTTACAATGAACAATGGTCATGCTGTTAAAGATAAGATCCCACAACCTCTCTTACAGCTATGTGTGGCTCTCTGACTAGATTAGGTTCTAACCAATG	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3980:HG2_Ill_MetaSV_3801:HG2_PB_pbsv_5166:HG3_10X_allpass_1047:HG2_10X_allpass_847:HG3_Ill_manta_1220:HG3_Ill_GATKHCSBGrefine_3525:HG2_Ill_manta_1482:HG2_Ill_GATKHCSBGrefine_3558:HG2_Ill_tnscope_580:HG2_PB_SVrefine2Falcon1plusDovetail_9146:HG3_Ill_SVrefine2DISCOVARDovetail_4035:HG2_PB_SVrefine2Falcon2Bionano_2516:HG2_Ill_SVrefine2DISCOVARplusDovetail_9981:HG2_10X_SVrefine210Xhap12_3790:HG2_PB_SVrefine2PB10Xhap12_3749:HG2_PB_assemblyticsfalcon_20513:HG3_PB_pbsv_5031;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3558:HG2_Ill_manta_1482:HG3_Ill_GATKHCSBGrefine_3525:HG3_Ill_manta_1220;NumExactMatchSVs=4;ClusterMaxShiftDist=0.330623;ClusterMaxSizeDiff=0.330623;ClusterMaxEditDist=0.330623;PBcalls=6;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-343;DistBack=11705;DistForward=5717;DistMin=5717;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:180063818-180064162;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2995.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:43:22:0|1:40:1:1:20:./.:0:0:0:0:./.:49:4:./.:38:4:.:.:.
chr4	180097876	HG2_10X_allpass_848	AATTATTGTTAACTTTTGTCACCCTACTGTGCTGTTGAACACTTTTCTAACTGTATTTTTGGACCCATTAAACAATTCTCTTTATTACTCCTCCTTCCTATTCTTTGCAACTGCTGGTAACCATCATTATACTCTCTACCTTCGTGAGATAATTTTTTTTTAATTCCCACATATGAATGAGAACATGCGATATTCATCTTTCAATGCCTGGCTTATTTCATTTACATAATGCCCACCAGTTCTATGTTGCTACAAATAACAGCATTTCTGTCTTTTCTACGGCTGAATAATATTTCATTTTATATATATAAAAAAAAAATTTCTTTATTCATTCAACTGTTGATGAACACAAGCGGCTTCCACATCTTGGCTATTATAAATAGTGCTGTAATAAACATGGAAGTACAGATGTCTCTCTAATATACTGATTTCCTTTCTTTTGGATATATACCCAGCAGTTAGACTGTTGAATTTTATGGTGATTAATTTTTTTTAATTTTTGAGGAAGCTTCATGCTATTTTCCATTGTGGTGTACTAATTTACAATCCCACCAATGACATATGAGCATTCTTTTTTCTCTTCATTCTTGCCAACATTTCTTATTTTCTGTTGTTTTGATAATAGCTATTCT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_5032:HG2_PB_pbsv_5167:HG2_PB_SVrefine2Falcon1plusDovetail_9147:HG3_PB_SVrefine2PBcRDovetail_2386:HG3_Ill_manta_1221:HG3_Ill_MetaSV_3981:HG3_Ill_GATKHCSBGrefine_3526:HG3_10X_allpass_1048:HG2_PB_SVrefine2Falcon2Bionano_2517:HG2_Ill_manta_1483:HG2_Ill_MetaSV_3802:HG2_Ill_GATKHCSBGrefine_3559:HG2_10X_allpass_848:HG2_10X_SVrefine210Xhap12_3791:HG2_PB_assemblyticsfalcon_20514:HG3_Ill_Krunchall_7365:HG2_Ill_Krunchall_7472:HG3_Ill_Spiral_5771:HG2_Ill_tnscope_581;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3791:HG2_10X_allpass_848:HG2_Ill_GATKHCSBGrefine_3559:HG2_Ill_MetaSV_3802:HG2_Ill_manta_1483:HG2_PB_SVrefine2Falcon2Bionano_2517:HG3_10X_allpass_1048:HG3_Ill_GATKHCSBGrefine_3526:HG3_Ill_MetaSV_3981:HG3_Ill_manta_1221:HG3_PB_SVrefine2PBcRDovetail_2386;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00633914;ClusterMaxSizeDiff=0.00633914;ClusterMaxEditDist=0.0126984;PBcalls=6;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-631;DistBack=-632;DistForward=13176;DistMin=-632;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=4:180097877-180098508;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2996.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:15:./.:29:0:4:10:./.:0:0:0:0:0/1:58:12:0/1:42:16:.:.:.
chr4	180799699	HG2_PB_SVrefine2Falcon2Bionano_2520	ATACACATATATATACACATATATATACATATATATACACATATATACATACATATATACACATATATATACATATATACACATATATATATACATATATATACACATACATATATACATATATATACATATATACATATATATACATATATATACATATATACATATATATACATATATATACATATATACACATATATACATATATACATATATACATACATATATACATATATACACATACATATATACATATATATACGTACATATATATACATATATATACACATACATATATATACATACATACATATATATATATATATATATATATA	G	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_3959:HG4_PB_assemblyticsfalcon_20051:HG3_PB_assemblyticsfalcon_20443:HG2_PB_assemblyticsfalcon_20523:HG2_PB_assemblyticsPBcR_19860:HG4_PB_SVrefine2PBcRDovetail_2645:HG4_PB_SVrefine2Falcon1Dovetail_3156:HG2_Ill_SVrefine2DISCOVARplusDovetail_9984:HG2_10X_SVrefine210Xhap12_3793:HG3_PB_SVrefine2Falcon1Dovetail_3197:HG3_Ill_SVrefine2DISCOVARDovetail_4039:HG2_PB_SVrefine2PBcRplusDovetail_8507:HG2_PB_SVrefine2PB10Xhap12_3752:HG2_PB_SVrefine2Falcon2Bionano_2520:HG2_PB_SVrefine2Falcon1plusDovetail_9150:HG3_PB_SVrefine2PBcRDovetail_2388:HG2_Ill_manta_1485:HG2_Ill_MetaSV_3805:HG3_Ill_MetaSV_3984:HG4_PB_pbsv_5204:HG2_PB_HySA_9769:HG3_PB_pbsv_5039:HG2_PB_pbsv_5173:HG2_Ill_tnscope_582:HG3_PB_HySA_8020;NumClusterSVs=25;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9150:HG2_PB_SVrefine2Falcon2Bionano_2520:HG2_PB_SVrefine2PB10Xhap12_3752:HG2_PB_SVrefine2PBcRplusDovetail_8507:HG3_Ill_SVrefine2DISCOVARDovetail_4039:HG3_PB_SVrefine2Falcon1Dovetail_3197;NumExactMatchSVs=6;ClusterMaxShiftDist=0.143906;ClusterMaxSizeDiff=0.143906;ClusterMaxEditDist=0.143906;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-334;DistBack=-18;DistForward=-332;DistMin=-332;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=4:180799699-180800033;PctSeqSimilarity=0.9385;PctSizeSimilarity=0.982;PctRecOverlap=0.9493;SizeDiff=6;StartDistance=11;EndDistance=17;GTMatch=0;TruScore=95;MatchId=2997.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:2:20:2:23:./.:0:0:0:0:0/1:5:22:0/1:2:9:.:.:.
chr4	181317271	HG4_Ill_manta_1305	AACAGGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCTACC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3807:HG3_Ill_Krunchall_7380:HG3_PB_HySA_8026:HG2_PB_HySA_9776:HG2_PB_pbsv_5175:HG4_PB_pbsv_5207:HG4_Ill_svaba_6805:HG4_Ill_scalpel_5052:HG4_Ill_manta_1305:HG4_Ill_SVrefine2DISCOVARDovetail_3961:HG4_10X_allpass_1001:HG3_PB_pbsv_5042:HG3_PB_SVrefine2PBcRDovetail_2392:HG3_Ill_svaba_6818:HG3_Ill_scalpel_5258:HG3_Ill_manta_1224:HG3_Ill_SVrefine2DISCOVARDovetail_4042:HG3_Ill_MetaSV_3985:HG3_10X_allpass_1049:HG2_PB_SVrefine2PBcRplusDovetail_8509:HG2_PB_SVrefine2PB10Xhap12_3755:HG2_PB_SVrefine2Falcon2Bionano_2522:HG2_PB_SVrefine2Falcon1plusDovetail_9152:HG2_Ill_svaba_6677:HG2_Ill_scalpel_5144:HG2_Ill_manta_1488:HG2_Ill_breakscan11_723:HG2_Ill_SVrefine2DISCOVARplusDovetail_9985:HG2_Ill_MetaSV_3808:HG2_10X_allpass_849:HG2_10X_SVrefine210Xhap12_3797;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3797:HG2_10X_allpass_849:HG2_Ill_MetaSV_3808:HG2_Ill_SVrefine2DISCOVARplusDovetail_9985:HG2_Ill_breakscan11_723:HG2_Ill_manta_1488:HG2_Ill_scalpel_5144:HG2_Ill_svaba_6677:HG2_PB_SVrefine2Falcon1plusDovetail_9152:HG2_PB_SVrefine2Falcon2Bionano_2522:HG2_PB_SVrefine2PB10Xhap12_3755:HG2_PB_SVrefine2PBcRplusDovetail_8509:HG3_10X_allpass_1049:HG3_Ill_MetaSV_3985:HG3_Ill_SVrefine2DISCOVARDovetail_4042:HG3_Ill_manta_1224:HG3_Ill_scalpel_5258:HG3_Ill_svaba_6818:HG3_PB_SVrefine2PBcRDovetail_2392:HG3_PB_pbsv_5042:HG4_10X_allpass_1001:HG4_Ill_SVrefine2DISCOVARDovetail_3961:HG4_Ill_manta_1305:HG4_Ill_scalpel_5052:HG4_Ill_svaba_6805;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0162602;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.0162602;PBcalls=10;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-183;DistBack=-41;DistForward=4764;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=4:181317272-181317472;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2998.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:1:25:2:22:./.:0:0:0:0:1/1:0:45:./.:.:.:.:.:.
chr4	181549428	HG3_10X_allpass_1050	TCTGTGTCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_5209:HG2_PB_assemblyticsPBcR_19864:HG4_PB_assemblyticsfalcon_20058:HG3_PB_assemblyticsfalcon_20450:HG2_PB_assemblyticsfalcon_20529:HG4_Ill_Krunchall_7772:HG3_Ill_Krunchall_7384:HG2_Ill_Krunchall_7487:HG4_Ill_Spiral_428:HG2_PB_pbsv_5178:HG3_PB_pbsv_5044:HG3_PB_HySA_8028:HG2_PB_HySA_9779:HG4_Ill_MetaSV_3981:HG2_Ill_tnscope_583:HG4_PB_SVrefine2PBcRDovetail_2648:HG4_PB_SVrefine2Falcon1Dovetail_3159:HG4_Ill_scalpel_5055:HG4_Ill_manta_1306:HG4_Ill_SVrefine2DISCOVARDovetail_3963:HG4_Ill_GATKHCSBGrefine_3721:HG4_10X_allpass_1002:HG3_PB_SVrefine2PBcRDovetail_2393:HG3_PB_SVrefine2Falcon1Dovetail_3200:HG3_Ill_scalpel_5260:HG3_Ill_manta_1225:HG3_Ill_SVrefine2DISCOVARDovetail_4047:HG3_Ill_MetaSV_3986:HG3_Ill_GATKHCSBGrefine_3537:HG3_10X_allpass_1050:HG2_PB_SVrefine2PBcRplusDovetail_8511:HG2_PB_SVrefine2PB10Xhap12_3757:HG2_PB_SVrefine2Falcon2Bionano_2524:HG2_PB_SVrefine2Falcon1plusDovetail_9154:HG2_Ill_scalpel_5145:HG2_Ill_manta_1489:HG2_Ill_SVrefine2DISCOVARplusDovetail_9987:HG2_Ill_MetaSV_3810:HG2_Ill_GATKHCSBGrefine_3567:HG2_10X_allpass_850:HG2_10X_SVrefine210Xhap12_3798:HG2_Ill_breakscan11_724:HG3_Ill_Spiral_5786:HG2_Ill_Spiral_379;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3798:HG2_10X_allpass_850:HG2_Ill_GATKHCSBGrefine_3567:HG2_Ill_MetaSV_3810:HG2_Ill_SVrefine2DISCOVARplusDovetail_9987:HG2_Ill_manta_1489:HG2_Ill_scalpel_5145:HG2_PB_SVrefine2Falcon1plusDovetail_9154:HG2_PB_SVrefine2Falcon2Bionano_2524:HG2_PB_SVrefine2PB10Xhap12_3757:HG2_PB_SVrefine2PBcRplusDovetail_8511:HG3_10X_allpass_1050:HG3_Ill_GATKHCSBGrefine_3537:HG3_Ill_MetaSV_3986:HG3_Ill_SVrefine2DISCOVARDovetail_4047:HG3_Ill_manta_1225:HG3_Ill_scalpel_5260:HG3_PB_SVrefine2Falcon1Dovetail_3200:HG3_PB_SVrefine2PBcRDovetail_2393:HG4_10X_allpass_1002:HG4_Ill_GATKHCSBGrefine_3721:HG4_Ill_SVrefine2DISCOVARDovetail_3963:HG4_Ill_manta_1306:HG4_Ill_scalpel_5055:HG4_PB_SVrefine2Falcon1Dovetail_3159:HG4_PB_SVrefine2PBcRDovetail_2648;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0743134;ClusterMaxSizeDiff=0.0743134;ClusterMaxEditDist=0.0776699;PBcalls=17;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=19874;DistForward=601;DistMin=601;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=4:181549429-181549754;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2999.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:67:1/1:1:33:2:28:./.:0:0:0:0:1/1:0:46:1/1:0:17:.:.:.
chr4	181876786	HG4_Ill_SVrefine2DISCOVARDovetail_3964	TCTCTACAGCACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATTCTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_725:HG2_PB_HySA_9785:HG3_10X_allpass_1051:HG4_Ill_Krunchall_7777:HG3_Ill_Krunchall_7388:HG2_Ill_Krunchall_7491:HG2_PB_assemblyticsPBcR_19871:HG4_PB_assemblyticsfalcon_20063:HG3_PB_assemblyticsfalcon_20454:HG2_PB_assemblyticsfalcon_20532:HG2_Ill_tnscope_584:HG4_PB_pbsv_5210:HG4_PB_SVrefine2PBcRDovetail_2649:HG4_PB_SVrefine2Falcon1Dovetail_3160:HG4_Ill_SVrefine2DISCOVARDovetail_3964:HG4_Ill_MetaSV_3982:HG4_Ill_GATKHCSBGrefine_3723:HG4_10X_allpass_1003:HG3_PB_pbsv_5046:HG3_PB_SVrefine2PBcRDovetail_2394:HG3_PB_SVrefine2Falcon1Dovetail_3201:HG3_Ill_SVrefine2DISCOVARDovetail_4050:HG3_Ill_MetaSV_3987:HG3_Ill_GATKHCSBGrefine_3539:HG2_PB_pbsv_5181:HG2_PB_SVrefine2PBcRplusDovetail_8512:HG2_PB_SVrefine2PB10Xhap12_3758:HG2_PB_SVrefine2Falcon2Bionano_2526:HG2_PB_SVrefine2Falcon1plusDovetail_9155:HG2_Ill_SVrefine2DISCOVARplusDovetail_9991:HG2_Ill_MetaSV_3811:HG2_Ill_GATKHCSBGrefine_3569:HG2_10X_allpass_851:HG2_10X_SVrefine210Xhap12_3800;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3800:HG2_10X_allpass_851:HG2_Ill_GATKHCSBGrefine_3569:HG2_Ill_MetaSV_3811:HG2_Ill_SVrefine2DISCOVARplusDovetail_9991:HG2_PB_SVrefine2Falcon1plusDovetail_9155:HG2_PB_SVrefine2Falcon2Bionano_2526:HG2_PB_SVrefine2PB10Xhap12_3758:HG2_PB_SVrefine2PBcRplusDovetail_8512:HG2_PB_pbsv_5181:HG3_Ill_GATKHCSBGrefine_3539:HG3_Ill_MetaSV_3987:HG3_Ill_SVrefine2DISCOVARDovetail_4050:HG3_PB_SVrefine2Falcon1Dovetail_3201:HG3_PB_SVrefine2PBcRDovetail_2394:HG3_PB_pbsv_5046:HG4_10X_allpass_1003:HG4_Ill_GATKHCSBGrefine_3723:HG4_Ill_MetaSV_3982:HG4_Ill_SVrefine2DISCOVARDovetail_3964:HG4_PB_SVrefine2Falcon1Dovetail_3160:HG4_PB_SVrefine2PBcRDovetail_2649:HG4_PB_pbsv_5210;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0500659;ClusterMaxSizeDiff=0.0500659;ClusterMaxEditDist=0.0500659;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1502;DistBack=10337;DistForward=-1487;DistMin=-1487;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:181876787-181878304;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3000.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:102:1/1:0:31:2:23:./.:0:0:0:0:1/1:0:35:1/1:3:94:1584:.:.
chr4	182056559	HG2_Ill_SVrefine2DISCOVARplusDovetail_9994	GGTAATGATGAATATTATCCCTCATGTTCAAATAAGGCAGTATTTTGCCCAAGGTCATATGGCTAGTAGTGTTTGGCCCCAGCCAGTCTGACTGAACTTGGCCACACTTGGCAGGTGGAAGAAGTAAGGAAGAGGTGGAGAAGGCCCAGTCATAGCAGAAGGAAAACATGGAATAATTCAAATCGTGTTCACTGGGACTTGAAAGGAATAAATGATGAGAGGATTCAAGTCACATGTTCAAAGAAGCTTAGAGAGAACGAATAAAAAGAAAAAGACCTGCTATGTCAGGAAGGTCACTCAGAAGAGCCACTTCAGGAATTCTGGGAGAGAGGGTGGGATTTTTTTGAGACTGTGCCGTGTTCATCCTTGAAGAGAAACGGGGAGATTGGAAGGTTCTGTCCAGAAGGCATAGCAGAATGAAGGGGGAATTTTTAGATTTGTGAAGTAAAATATGTTTGAAATTCCCAGAGATGGAGTCTACAGGGAAGAAAAGATTCAAAATGCTAAAGGAGAAAAAAAGTAGTTGAAGGGACAGGTCTTTGAAGGGATGGGGTGTGGTAGAATCCTAAGC	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_585:HG4_PB_pbsv_5215:HG3_PB_assemblyticsfalcon_20464:HG2_PB_assemblyticsfalcon_20543:HG4_Ill_Krunchall_7785:HG3_Ill_Krunchall_7398:HG2_Ill_Krunchall_7503:HG4_PB_assemblyticsfalcon_20071:HG3_10X_allpass_1052:HG4_PB_SVrefine2PBcRDovetail_2651:HG4_PB_SVrefine2Falcon1Dovetail_3163:HG4_Ill_manta_1309:HG4_Ill_SVrefine2DISCOVARDovetail_3967:HG4_Ill_MetaSV_3983:HG4_Ill_GATKHCSBGrefine_3727:HG4_10X_allpass_1004:HG3_PB_SVrefine2Falcon1Dovetail_3203:HG3_Ill_manta_1226:HG3_Ill_SVrefine2DISCOVARDovetail_4053:HG3_Ill_MetaSV_3988:HG3_Ill_GATKHCSBGrefine_3542:HG2_PB_pbsv_5185:HG2_PB_SVrefine2Falcon2Bionano_2528:HG2_PB_SVrefine2Falcon1plusDovetail_9157:HG2_Ill_manta_1491:HG2_Ill_breakscan11_727:HG2_Ill_SpiralSDKrefine_13024:HG2_Ill_SVrefine2DISCOVARplusDovetail_9994:HG2_Ill_MetaSV_3812:HG2_Ill_GATKHCSBGrefine_3572:HG2_10X_allpass_852:HG2_10X_SVrefine210Xhap12_3803:HG3_PB_pbsv_5049:HG4_PB_HySA_7806;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3803:HG2_10X_allpass_852:HG2_Ill_GATKHCSBGrefine_3572:HG2_Ill_MetaSV_3812:HG2_Ill_SVrefine2DISCOVARplusDovetail_9994:HG2_Ill_SpiralSDKrefine_13024:HG2_Ill_breakscan11_727:HG2_Ill_manta_1491:HG2_PB_SVrefine2Falcon1plusDovetail_9157:HG2_PB_SVrefine2Falcon2Bionano_2528:HG2_PB_pbsv_5185:HG3_Ill_GATKHCSBGrefine_3542:HG3_Ill_MetaSV_3988:HG3_Ill_SVrefine2DISCOVARDovetail_4053:HG3_Ill_manta_1226:HG3_PB_SVrefine2Falcon1Dovetail_3203:HG4_10X_allpass_1004:HG4_Ill_GATKHCSBGrefine_3727:HG4_Ill_MetaSV_3983:HG4_Ill_SVrefine2DISCOVARDovetail_3967:HG4_Ill_manta_1309:HG4_PB_SVrefine2Falcon1Dovetail_3163:HG4_PB_SVrefine2PBcRDovetail_2651;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0123131;ClusterMaxSizeDiff=0.0123131;ClusterMaxEditDist=0.0123131;PBcalls=12;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-570;DistBack=-566;DistForward=-571;DistMin=-571;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:182056560-182057131;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3001.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:43:0|1:36:4:3:28:./.:0:0:0:0:0/1:51:21:0/1:31:9:.:.:.
chr4	182961064	HG2_PB_SVrefine2Falcon1plusDovetail_9162	AGGAGGGGACAGGAGGGGATGGAAGGGGAGGGAAGGGGAGAAGAGGGCAGGGGAGGCTGAGGTGAGGCGATAGGAGGGGAGGGGAAGGCAGGGGAGGGGAGGGGAGAAGAGGGCAGGGGAGGGGAGGGCAGAAGAGGGCAGGGGAGGGGAGGGCAGAAGAGGGCAGG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9162:HG4_PB_SVrefine2Falcon1Dovetail_3170:HG3_PB_SVrefine2Falcon1Dovetail_3209:HG4_PB_assemblyticsfalcon_20089:HG3_PB_assemblyticsfalcon_20482:HG2_PB_HySA_9806:HG2_PB_SVrefine2Falcon2Bionano_2534:HG2_10X_SVrefine210Xhap12_3807:HG3_PB_SVrefine2PBcRDovetail_2400:HG2_PB_pbsv_5191:HG4_PB_pbsv_5222:HG3_PB_pbsv_5054:HG4_PB_SVrefine2PBcRDovetail_2657:HG3_Ill_SVrefine2DISCOVARDovetail_4059:HG2_PB_SVrefine2PBcRplusDovetail_8520:HG2_PB_SVrefine2PB10Xhap12_3765;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9162:HG4_PB_SVrefine2PBcRDovetail_2657:HG3_Ill_SVrefine2DISCOVARDovetail_4059:HG2_PB_SVrefine2PBcRplusDovetail_8520:HG2_PB_SVrefine2PB10Xhap12_3765;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0581395;ClusterMaxSizeDiff=0.0581395;ClusterMaxEditDist=0.190751;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-166;DistBack=25731;DistForward=-167;DistMin=-167;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=230;REFWIDENED=4:182961065-182961460;PctSeqSimilarity=0.9026;PctSizeSimilarity=0.9486;PctRecOverlap=0.2216;SizeDiff=-9;StartDistance=-128;EndDistance=-137;GTMatch=0;TruScore=69;MatchId=3002.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:1/1:0:32:2:17:./.:0:0:0:0:0/0:13:1:./.:.:.:.:.:.
chr4	183035425	HG3_Ill_Cortex_2827	TTTTTTGACAACTATGAAGTTCCTATGAATGAAATGCATAGAATTTAGTCTGAGAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3809:HG2_PB_pbsv_5193:HG3_Ill_svaba_6847:HG3_Ill_manta_1227:HG3_Ill_Krunchall_7414:HG3_Ill_GATKHC_8784:HG3_Ill_GATKHCSBGrefine_3547:HG3_Ill_Cortex_2827:HG3_Ill_250bpfermikitraw_7117:HG3_Ill_150bpfermikitraw_6949:HG2_Ill_svaba_6704:HG2_Ill_scalpel_5164:HG2_Ill_manta_1493:HG2_Ill_SpiralSDKrefine_13034:HG2_Ill_Krunchall_7517:HG2_Ill_GATKHC_8757:HG2_Ill_GATKHCSBGrefine_3577:HG2_Ill_Cortex_6732:HG2_Ill_250bpfermikitraw_7334:HG2_Ill_150bpfermikitraw_6847:HG3_PB_pbsv_5056:HG3_PB_HySA_8052:HG2_PB_HySA_9813:HG3_PB_SVrefine2PBcRDovetail_2402:HG3_Ill_SVrefine2DISCOVARDovetail_4061:HG2_PB_SVrefine2PBcRplusDovetail_8522:HG2_PB_SVrefine2PB10Xhap12_3767:HG2_PB_SVrefine2Falcon2Bionano_2536:HG2_PB_SVrefine2Falcon1plusDovetail_9163:HG2_Ill_SVrefine2DISCOVARplusDovetail_10001;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6847:HG2_Ill_250bpfermikitraw_7334:HG2_Ill_Cortex_6732:HG2_Ill_GATKHCSBGrefine_3577:HG2_Ill_GATKHC_8757:HG2_Ill_Krunchall_7517:HG2_Ill_SpiralSDKrefine_13034:HG2_Ill_manta_1493:HG2_Ill_scalpel_5164:HG2_Ill_svaba_6704:HG3_Ill_150bpfermikitraw_6949:HG3_Ill_250bpfermikitraw_7117:HG3_Ill_Cortex_2827:HG3_Ill_GATKHCSBGrefine_3547:HG3_Ill_GATKHC_8784:HG3_Ill_Krunchall_7414:HG3_Ill_manta_1227:HG3_Ill_svaba_6847;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.125;PBcalls=9;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-55;DistBack=13006;DistForward=-43;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=56;REFWIDENED=4:183035384-183035494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3003.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:42:./.:14:36:12:0:./.:0:0:0:0:0/1:30:36:./.:.:.:.:.:.
chr4	184385387	HG2_Ill_Krunchall_7536	ATGCTGATTGGTGCGTTTACAATCCTTTAGCTAGACACAGTGCGCTGATTGGTGCGCTTTTATAGAG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6867:HG3_PB_pbsv_5067:HG2_PB_pbsv_5202:HG4_PB_pbsv_5233:HG4_Ill_GATKHC_8844:HG4_Ill_GATKHCSBGrefine_3735:HG3_Ill_GATKHC_8804:HG3_Ill_GATKHCSBGrefine_3553:HG2_Ill_GATKHC_8777:HG2_Ill_GATKHCSBGrefine_3582:HG2_Ill_SpiralSDKrefine_13045:HG4_Ill_manta_1315:HG2_Ill_manta_1496:HG4_Ill_Spiral_430:HG3_Ill_Spiral_5814:HG2_Ill_Spiral_381:HG4_PB_assemblyticsfalcon_20108:HG3_PB_assemblyticsfalcon_20505:HG2_PB_assemblyticsPBcR_19912:HG2_PB_assemblyticsfalcon_20581:HG2_PB_HySA_9832:HG4_Ill_svaba_6845:HG4_Ill_Krunchall_7817:HG4_Ill_250bpfermikitraw_7407:HG4_Ill_150bpfermikitraw_7100:HG3_Ill_svaba_6865:HG3_Ill_scalpel_5291:HG3_Ill_150bpfermikitraw_6968:HG2_Ill_svaba_6723:HG2_Ill_Krunchall_7536:HG2_Ill_250bpfermikitraw_7353;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6867:HG4_Ill_svaba_6845:HG4_Ill_Krunchall_7817:HG4_Ill_250bpfermikitraw_7407:HG4_Ill_150bpfermikitraw_7100:HG3_Ill_svaba_6865:HG3_Ill_scalpel_5291:HG3_Ill_150bpfermikitraw_6968:HG2_Ill_svaba_6723:HG2_Ill_Krunchall_7536:HG2_Ill_250bpfermikitraw_7353;NumExactMatchSVs=11;ClusterMaxShiftDist=0.141732;ClusterMaxSizeDiff=0.141732;ClusterMaxEditDist=0.144;PBcalls=8;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=942;DistForward=10322;DistMin=942;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=194;REFWIDENED=4:184385384-184385643;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3005.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:70:1/1:2:37:4:18:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr4	184661402	HG3_Ill_150bpfermikitraw_6971	AGATGGATGGACCACACCGCGCCTGGCCTAACCCGTTCCTTTTTATTGTTGATTACTATTGCAT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2546:HG3_Ill_Krunchall_7432:HG2_PB_pbsv_5209:HG3_PB_pbsv_5073:HG2_PB_HySA_9840:HG2_PB_assemblyticsfalcon_20589:HG3_Ill_svaba_6868:HG3_Ill_scalpel_5296:HG3_Ill_Krunchall_7431:HG3_Ill_GATKHC_8806:HG3_Ill_Cortex_2833:HG3_Ill_250bpfermikitraw_7137:HG3_Ill_150bpfermikitraw_6971:HG2_Ill_svaba_6729:HG2_Ill_scalpel_5185:HG2_Ill_manta_1498:HG2_Ill_breakscan11_729:HG2_Ill_SpiralSDKrefine_13046:HG2_Ill_Krunchall_7538:HG2_Ill_GATKHC_8779:HG2_Ill_Cortex_6747:HG2_Ill_250bpfermikitraw_7355:HG2_Ill_150bpfermikitraw_6870:HG3_PB_HySA_8082:HG3_PB_assemblyticsfalcon_20515:HG3_PB_SVrefine2PBcRDovetail_2414:HG2_PB_SVrefine2PBcRplusDovetail_8530:HG2_PB_SVrefine2PB10Xhap12_3779;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6870:HG2_Ill_250bpfermikitraw_7355:HG2_Ill_Cortex_6747:HG2_Ill_GATKHC_8779:HG2_Ill_Krunchall_7538:HG2_Ill_SpiralSDKrefine_13046:HG2_Ill_breakscan11_729:HG2_Ill_manta_1498:HG2_Ill_scalpel_5185:HG2_Ill_svaba_6729:HG3_Ill_150bpfermikitraw_6971:HG3_Ill_250bpfermikitraw_7137:HG3_Ill_Cortex_2833:HG3_Ill_GATKHC_8806:HG3_Ill_Krunchall_7431:HG3_Ill_scalpel_5296:HG3_Ill_svaba_6868;NumExactMatchSVs=17;ClusterMaxShiftDist=0.131148;ClusterMaxSizeDiff=0.131148;ClusterMaxEditDist=0.15;PBcalls=10;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-63;DistBack=3318;DistForward=12690;DistMin=3318;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=65;REFWIDENED=4:184661353-184661480;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3006.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:35:0|1:27:4:5:29:./.:0:0:0:0:0/1:30:24:./.:.:.:2021:.:.
chr4	184674156	HG2_PB_SVrefine2Falcon2Bionano_2547	GTTTTTTTTTTTTTTTTGAGAGGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCTCACTGTAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGGCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCTGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAGTCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGTGCCAGGCAGCTTTAGTCTTTATAATAGACCACGTGGCTTCTCTTGAATGGAGTAAATTATATTTTATGCAAAGATTGTATGTAGCACACACAGAAATAAACCAGAATCCTAAAGGTTTACCACTTTGGAATTTGCTGAGAAAACCTGAACTCAACGAGACAGTATTATAACTCATTTAGAGAGGGACGTTAACAATTCTGTATTTTGATATTAGTTTCCTATTCCTTGTAATAAAGGATCAGCTGATTGCATTTCAGCGTTGCAGCTTAGGGCACAGCCTCTGTCTCGGTGGTCTGCGTGCTACTGGCTCTTGTTTTCTGCGTCGAATCCTTCCCCTTCCTTTAAGGTTATTCTCACTAATCACAGCTCCATGCACTTGTTCAAAGCACAGTCCTGAAGCACACAAGCTTCGCTAATGAATCTCTTTAGAAGACCTTGCCTCCCTCCCATATACTCTACAAAATGGGGAGTGTCTGCTTTGCAAGTTAACTGGAATGGATGCCCAATGCCGATGCTGCAGCTCTGGCCGTCTGTCTGTCTGTCTGTCTGTCCCTCTCTCTCTAACTCAGGCACCGTTTTTCTAATACCTGTGAATTCTGCCCCATCAGGAGGCCCCTTTTCCACTTACCTGGTTCCCATGTAGGCATTTGCTATAGAGTTGAACTGTAGATGGGTGTAGCGTTACTCTCATGACCTAATCTGATAATGTGCAGAAGAGCCGGTGATAATGGATGCACAGTTCCTATAAGACTGAGCCTTGGATTCCCATGTTCGTTCGCCTCTCGCCCCTTTTTTGTCGGGATTCAATAAATGGGAAGTCGAAAATTCAACACTCAAATAGGAGAGTCAACTATGTAAAGGCAGACTCCTCTAAGCATTAAAATGAAGGCTGAAATACTAACGTCCTTGTGACCTGCAATCATTTCTTCTAAGAGGAGGGTCAGTAGACTGTGTTTGTTGAGCATATTTTTAGAACTTTGCCATTGAATCCAGTCGTGCAGGTCTGGGCCTTGCTCTGTGGAAACGGTAGTCACGGCCAAGCCTGACTTTGCTGCCTTTGCAGCTCCCACCTGAATCCTCCTCCTGTTTGACCACGCCTTTTCTGCCCACCCATACTGGAGCTCACTTCCTCTGGCAGTGTGGATCAGAACGTCCCGCTTCTTTTTTTTTTT	G	20	PASS	ClusterIDs=HG3_PB_pbsv_5074:HG2_10X_allpass_854:HG2_PB_HySA_9841:HG2_PB_pbsv_5210:HG3_10X_allpass_1057:HG3_Ill_MetaSV_3997:HG2_Ill_MetaSV_3818:HG3_PB_SVrefine2PBcRDovetail_2415:HG2_Ill_GATKHCSBGrefine_3585:HG2_PB_SVrefine2PBcRplusDovetail_8531:HG2_PB_SVrefine2PB10Xhap12_3780:HG2_PB_SVrefine2Falcon2Bionano_2547:HG2_Ill_SVrefine2DISCOVARplusDovetail_10014:HG2_10X_SVrefine210Xhap12_3817;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10014:HG2_PB_SVrefine2Falcon2Bionano_2547:HG2_PB_SVrefine2PB10Xhap12_3780:HG2_PB_SVrefine2PBcRplusDovetail_8531;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0404463;ClusterMaxSizeDiff=0.0404463;ClusterMaxEditDist=0.0439331;PBcalls=7;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-1462;DistBack=12690;DistForward=7204;DistMin=7204;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=285;REFWIDENED=4:184674157-184675903;PctSeqSimilarity=0.942;PctSizeSimilarity=0.9986;PctRecOverlap=0.9234;SizeDiff=2;StartDistance=-112;EndDistance=-110;GTMatch=0;TruScore=95;MatchId=3007.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:32:0|1:30:0:2:25:./.:0:0:0:0:0/1:30:14:0/1:137:54:2021:.:.
chr4	184754838	HG3_10X_allpass_1058	GAAAGAATGTGAGAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_7539:HG2_PB_assemblyticsfalcon_20590:HG2_PB_assemblyticsPBcR_19917:HG4_PB_SVrefine2Falcon1Dovetail_3181:HG4_PB_assemblyticsfalcon_20116:HG3_PB_pbsv_5075:HG2_PB_pbsv_5211:HG2_PB_HySA_9842:HG3_Ill_MetaSV_3999:HG2_Ill_tnscope_587:HG2_Ill_MetaSV_3819:HG3_PB_SVrefine2PBcRDovetail_2416:HG3_Ill_manta_1230:HG3_Ill_SVrefine2DISCOVARDovetail_4073:HG3_Ill_GATKHCSBGrefine_3556:HG3_10X_allpass_1058:HG2_PB_SVrefine2PBcRplusDovetail_8532:HG2_PB_SVrefine2PB10Xhap12_3781:HG2_PB_SVrefine2Falcon2Bionano_2548:HG2_PB_SVrefine2Falcon1plusDovetail_9176:HG2_Ill_SVrefine2DISCOVARplusDovetail_10015:HG2_Ill_GATKHCSBGrefine_3586:HG2_10X_SVrefine210Xhap12_3819:HG3_PB_assemblyticsfalcon_20516:HG3_PB_SVrefine2Falcon1Dovetail_3223:HG2_Ill_breakscan11_730:HG3_PB_HySA_8083:HG3_Ill_Spiral_5817:HG3_Ill_MetaSV_3998:HG3_Ill_Krunchall_7433;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3819:HG2_Ill_GATKHCSBGrefine_3586:HG2_Ill_SVrefine2DISCOVARplusDovetail_10015:HG2_PB_SVrefine2Falcon1plusDovetail_9176:HG2_PB_SVrefine2Falcon2Bionano_2548:HG2_PB_SVrefine2PB10Xhap12_3781:HG2_PB_SVrefine2PBcRplusDovetail_8532:HG3_10X_allpass_1058:HG3_Ill_GATKHCSBGrefine_3556:HG3_Ill_SVrefine2DISCOVARDovetail_4073:HG3_Ill_manta_1230:HG3_PB_SVrefine2PBcRDovetail_2416;NumExactMatchSVs=12;ClusterMaxShiftDist=0.220859;ClusterMaxSizeDiff=0.220859;ClusterMaxEditDist=0.220859;PBcalls=15;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=34769;DistForward=-297;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:184754839-184755167;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3008.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:35:./.:0:0:0:0:./.:0:0:0:0:0/1:29:16:0/1:23:6:.:.:.
chr4	185545620	HG3_PB_SVrefine2PBcRDovetail_2420	AACCTGTTTCTGACCACGGCCTCCATCACTGACCTGTTTCTGACCACAGCCTCCATCACTGACCTGTTTCTGACCACAGCCTCCATCACTGACCTGTTTCTGTCCACAGCCTCCATCACTG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10018:HG2_PB_assemblyticsPBcR_19933:HG2_PB_SVrefine2PBcRplusDovetail_8537:HG2_PB_SVrefine2PB10Xhap12_3785:HG2_Ill_SpiralSDKrefine_13056:HG3_PB_pbsv_5083:HG2_PB_pbsv_5219:HG3_PB_SVrefine2PBcRDovetail_2420:HG3_Ill_SVrefine2DISCOVARDovetail_4076:HG2_PB_SVrefine2Falcon2Bionano_2552;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10018:HG3_PB_SVrefine2PBcRDovetail_2420:HG3_Ill_SVrefine2DISCOVARDovetail_4076:HG2_PB_SVrefine2Falcon2Bionano_2552;NumExactMatchSVs=4;ClusterMaxShiftDist=0.190045;ClusterMaxSizeDiff=0.190045;ClusterMaxEditDist=0.190045;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-120;DistBack=110525;DistForward=110;DistMin=110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=179;REFWIDENED=4:185545651-185545919;PctSeqSimilarity=0.9926;PctSizeSimilarity=1;PctRecOverlap=0.8595;SizeDiff=0;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=95;MatchId=3009.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:38:./.:27:22:9:9:./.:0:0:0:0:0/1:15:6:./.:.:.:.:.:.
chr4	185665771	HG3_Ill_GATKHCSBGrefine_3564	TCTAAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3823:HG2_PB_assemblyticsPBcR_19935:HG4_PB_assemblyticsfalcon_20130:HG3_PB_assemblyticsfalcon_20528:HG2_PB_assemblyticsfalcon_20604:HG2_Ill_Krunchall_7552:HG3_PB_HySA_8103:HG4_PB_pbsv_5255:HG2_PB_HySA_9861:HG4_Ill_MetaSV_3989:HG3_Ill_MetaSV_4000:HG2_Ill_tnscope_588:HG2_Ill_MetaSV_3821:HG4_PB_SVrefine2PBcRDovetail_2669:HG4_PB_SVrefine2Falcon1Dovetail_3186:HG4_Ill_svaba_6866:HG4_Ill_scalpel_5099:HG4_Ill_manta_1318:HG4_Ill_SVrefine2DISCOVARDovetail_3995:HG4_Ill_GATKHCSBGrefine_3747:HG4_10X_allpass_1009:HG3_PB_pbsv_5086:HG3_PB_SVrefine2PBcRDovetail_2424:HG3_PB_SVrefine2Falcon1Dovetail_3229:HG3_Ill_svaba_6885:HG3_Ill_manta_1233:HG3_Ill_SVrefine2DISCOVARDovetail_4078:HG3_Ill_GATKHCSBGrefine_3564:HG3_10X_allpass_1059:HG2_PB_pbsv_5223:HG2_PB_SVrefine2PBcRplusDovetail_8539:HG2_PB_SVrefine2PB10Xhap12_3787:HG2_PB_SVrefine2Falcon2Bionano_2554:HG2_PB_SVrefine2Falcon1plusDovetail_9182:HG2_Ill_svaba_6746:HG2_Ill_manta_1501:HG2_Ill_breakscan11_731:HG2_Ill_SVrefine2DISCOVARplusDovetail_10021:HG2_Ill_GATKHCSBGrefine_3595:HG2_10X_allpass_855;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3823:HG4_PB_SVrefine2PBcRDovetail_2669:HG4_PB_SVrefine2Falcon1Dovetail_3186:HG4_Ill_svaba_6866:HG4_Ill_scalpel_5099:HG4_Ill_manta_1318:HG4_Ill_SVrefine2DISCOVARDovetail_3995:HG4_Ill_GATKHCSBGrefine_3747:HG4_10X_allpass_1009:HG3_PB_pbsv_5086:HG3_PB_SVrefine2PBcRDovetail_2424:HG3_PB_SVrefine2Falcon1Dovetail_3229:HG3_Ill_svaba_6885:HG3_Ill_manta_1233:HG3_Ill_SVrefine2DISCOVARDovetail_4078:HG3_Ill_GATKHCSBGrefine_3564:HG3_10X_allpass_1059:HG2_PB_pbsv_5223:HG2_PB_SVrefine2PBcRplusDovetail_8539:HG2_PB_SVrefine2PB10Xhap12_3787:HG2_PB_SVrefine2Falcon2Bionano_2554:HG2_PB_SVrefine2Falcon1plusDovetail_9182:HG2_Ill_svaba_6746:HG2_Ill_manta_1501:HG2_Ill_breakscan11_731:HG2_Ill_SVrefine2DISCOVARplusDovetail_10021:HG2_Ill_GATKHCSBGrefine_3595:HG2_10X_allpass_855;NumExactMatchSVs=28;ClusterMaxShiftDist=0.066879;ClusterMaxSizeDiff=0.066879;ClusterMaxEditDist=0.066879;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=9312;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=4:185665772-185666100;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3010.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:0:28:2:31:./.:0:0:0:0:1/1:0:43:0/1:2:11:.:.:.
chr4	185883550	HG2_Ill_breakscan11_732	CTGGAATAGTGTACACTGTACCCGTCCCTGGTAGAGTGCACACTGTACCCGTCCCTGGAATAGTGCACATTGTACCGGTCCCTGGAATAGTGCACATTGTACTCGTCCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3826:HG2_PB_pbsv_5226:HG2_PB_SVrefine2PBcRplusDovetail_8541:HG3_PB_pbsv_5091:HG3_Ill_svaba_6886:HG3_Ill_scalpel_5307:HG3_Ill_MetaSV_4001:HG3_Ill_GATKHC_8818:HG2_Ill_svaba_6747:HG2_Ill_scalpel_5192:HG2_Ill_breakscan11_732:HG2_Ill_SpiralSDKrefine_13057:HG2_Ill_GATKHC_8794:HG2_Ill_GATKHCSBGrefine_3596:HG2_10X_allpass_857:HG3_PB_SVrefine2Falcon1Dovetail_3232:HG3_Ill_SVrefine2DISCOVARDovetail_4081:HG2_Ill_SVrefine2DISCOVARplusDovetail_10022;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_857:HG2_Ill_GATKHCSBGrefine_3596:HG2_Ill_GATKHC_8794:HG2_Ill_SpiralSDKrefine_13057:HG2_Ill_breakscan11_732:HG2_Ill_scalpel_5192:HG2_Ill_svaba_6747:HG3_Ill_GATKHC_8818:HG3_Ill_MetaSV_4001:HG3_Ill_scalpel_5307:HG3_Ill_svaba_6886:HG3_PB_pbsv_5091;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.150235;PBcalls=4;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-108;DistBack=66;DistForward=-87;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=163;REFWIDENED=4:185883411-185883681;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3011.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:19:./.:28:11:4:6:./.:0:0:0:0:0/1:27:19:./.:.:.:.:.:.
chr4	186113898	HG2_Ill_svaba_6749	TTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGC	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_20534:HG3_Ill_svaba_6890:HG3_Ill_scalpel_5309:HG3_Ill_manta_1234:HG3_Ill_Krunchall_7448:HG3_Ill_GATKHC_8823:HG3_Ill_GATKHCSBGrefine_3567:HG3_Ill_250bpfermikitraw_7156:HG3_Ill_150bpfermikitraw_6986:HG3_CG_vcfBeta_2994:HG2_Ill_svaba_6749:HG2_Ill_scalpel_5193:HG2_Ill_manta_1502:HG2_Ill_Krunchall_7553:HG2_Ill_GATKHC_8796:HG2_Ill_GATKHCSBGrefine_3597:HG2_Ill_250bpfermikitraw_7371:HG2_Ill_150bpfermikitraw_6888:HG2_PB_assemblyticsfalcon_20608;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6888:HG2_Ill_250bpfermikitraw_7371:HG2_Ill_GATKHCSBGrefine_3597:HG2_Ill_GATKHC_8796:HG2_Ill_Krunchall_7553:HG2_Ill_manta_1502:HG2_Ill_scalpel_5193:HG2_Ill_svaba_6749:HG3_CG_vcfBeta_2994:HG3_Ill_150bpfermikitraw_6986:HG3_Ill_250bpfermikitraw_7156:HG3_Ill_GATKHCSBGrefine_3567:HG3_Ill_GATKHC_8823:HG3_Ill_Krunchall_7448:HG3_Ill_manta_1234:HG3_Ill_scalpel_5309:HG3_Ill_svaba_6890;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0384615;PBcalls=2;Illcalls=16;TenXcalls=0;CGcalls=1;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=1;HG2count=9;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-51;DistBack=-36;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=4:186113897-186113950;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3012.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:./.:5:8:15:11:./.:0:0:0:0:0/1:23:15:./.:.:.:.:.:.
chr4	186155540	HG2_PB_SVrefine2PBcRplusDovetail_8543	TAAAAAGTTTAGGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3788:HG2_PB_assemblyticsPBcR_19939:HG2_PB_HySA_9875:HG4_Ill_Krunchall_7839:HG3_PB_pbsv_5096:HG2_Ill_Krunchall_7558:HG4_PB_pbsv_5258:HG2_PB_pbsv_5229:HG2_Ill_tnscope_589:HG4_PB_SVrefine2Falcon1Dovetail_3189:HG4_Ill_GATKHCSBGrefine_3749:HG4_10X_allpass_1011:HG3_Ill_manta_1235:HG3_Ill_MetaSV_4002:HG3_Ill_GATKHCSBGrefine_3569:HG3_10X_allpass_1061:HG2_PB_SVrefine2PBcRplusDovetail_8543:HG2_PB_SVrefine2Falcon2Bionano_2556:HG2_PB_SVrefine2Falcon1plusDovetail_9183:HG2_Ill_manta_1503:HG2_Ill_MetaSV_3822:HG2_Ill_GATKHCSBGrefine_3599:HG2_10X_allpass_858:HG2_10X_SVrefine210Xhap12_3827:HG2_Ill_breakscan11_733:HG2_Ill_Spiral_382;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3827:HG2_10X_allpass_858:HG2_Ill_GATKHCSBGrefine_3599:HG2_Ill_MetaSV_3822:HG2_Ill_manta_1503:HG2_PB_SVrefine2Falcon1plusDovetail_9183:HG2_PB_SVrefine2Falcon2Bionano_2556:HG2_PB_SVrefine2PBcRplusDovetail_8543:HG3_10X_allpass_1061:HG3_Ill_GATKHCSBGrefine_3569:HG3_Ill_MetaSV_4002:HG3_Ill_manta_1235:HG4_10X_allpass_1011:HG4_Ill_GATKHCSBGrefine_3749:HG4_PB_SVrefine2Falcon1Dovetail_3189;NumExactMatchSVs=15;ClusterMaxShiftDist=0.200581;ClusterMaxSizeDiff=0.200581;ClusterMaxEditDist=0.209302;PBcalls=10;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=-187;DistForward=-297;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=4:186155541-186155865;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3013.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:0|1:29:0:0:26:./.:0:0:0:0:0/1:35:16:0/1:19:4:.:.:.
chr4	186198865	HG3_Ill_scalpel_5313	ACTTATTACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_5259:HG3_10X_allpass_1062:HG2_10X_allpass_859:HG4_PB_HySA_7869:HG4_PB_assemblyticsfalcon_20139:HG4_Ill_Krunchall_7840:HG3_Ill_Krunchall_7453:HG4_Ill_GATKHCSBGrefine_3750:HG3_Ill_GATKHCSBGrefine_3570:HG2_Ill_GATKHCSBGrefine_3600:HG4_Ill_manta_1319:HG3_Ill_manta_1236:HG2_PB_SVrefine2Falcon1plusDovetail_9184:HG2_Ill_manta_1504:HG2_Ill_MetaSV_3823:HG3_Ill_MetaSV_4003:HG2_Ill_tnscope_590:HG4_PB_SVrefine2PBcRDovetail_2670:HG4_PB_SVrefine2Falcon1Dovetail_3190:HG4_Ill_scalpel_5103:HG4_Ill_MetaSV_3991:HG4_10X_allpass_1012:HG3_PB_pbsv_5097:HG3_Ill_scalpel_5313:HG2_PB_pbsv_5230:HG2_PB_assemblyticsfalcon_20612:HG2_PB_SVrefine2Falcon2Bionano_2557:HG2_Ill_scalpel_5197:HG2_10X_SVrefine210Xhap12_3829;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3829:HG2_Ill_scalpel_5197:HG2_PB_SVrefine2Falcon2Bionano_2557:HG2_PB_assemblyticsfalcon_20612:HG2_PB_pbsv_5230:HG3_Ill_scalpel_5313:HG3_PB_pbsv_5097:HG4_10X_allpass_1012:HG4_Ill_MetaSV_3991:HG4_Ill_scalpel_5103:HG4_PB_SVrefine2Falcon1Dovetail_3190:HG4_PB_SVrefine2PBcRDovetail_2670;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0947867;ClusterMaxSizeDiff=0.0947867;ClusterMaxEditDist=0.0947867;PBcalls=10;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=17537;DistForward=13794;DistMin=13794;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:186198866-186199197;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3014.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:31:0|1:44:1:0:28:./.:0:0:0:0:0/1:28:23:0/1:23:8:.:.:.
chr4	186441635	HG3_PB_SVrefine2PBcRDovetail_2430	TAAATATTCATATTTTCTAACCCCCAAATGTAGGACACAAGGGCTAATACATGCTTGACAAGAGGTCAGAGTATTTAAAATTAGGATTATGCCTTAAAATCCCATCCTTAGAATAACCATAGTCATAAATTAATACTCATAGACTTGCAATAGAAGCCTCTGCTAGAGCTACAACTTGGAAAATTACCCTTAAACTCCAATTCTGGAGAGATGTTAGCAAAACGTGGGCTCCCATCCTGGTCTAAACTCACTTTGTGCTTAGTAAATACTTGCTGAATTACTTACATGCTGGGGTGACGGATGCAACCATGATGAAGGATCACTGGGGATTTGGTACTTCGGTCAGATCTATCTAGTTGGCCTCATTTCTTGCATCTCATATTAACGAAATTGGGTTTAAAAATTAGGAGAAATTCTTGCATGGAAAAATAAGTTGCAAAGGATGCAGTGCAATATTGGATGTGTGCTGTGTAGGGAAAAGGAAATGCAGAGTCCCTTCTGGTTGGTCCAGGTAATGATAAGAGGCTGAGTGGTCAATAAGTGCATGTCTATTGACTTTAATTCTTAAAAGCACCATATAGTCTCTTTTTCTCATGTGTCACCTCCAGGTGATAAATTGATGACGGTGGGAGGAAGCAGGTCAGCCTGGGCATCTCTGCAAAAGGCTAGATACAAGTGAGAACTCTACCTCAAGAACTTTCCTTTTTTCTTCCACTATTTTCTTCTAGCAAAGAAAATGTTGACTAGAGGTGTCATTATTCACCAGCCCACCTAGTATGTCAGGGGGAGTCGCCATCAGCATTCAGATCCCTTCTCATTATATTTATTATCTGTGCCATCCATTTTCTTTTGCTCACTTACCCCAAAGAGCAAAAGTCTTACCTAGCCTAAGTATCCCACTCAACTTTCTTTTCTTTTCTTTTTTTTTTTTTTTGAGACAGGGTCTTGCTCTGTCACCCAAGCTGGAGTGCAGTGGTGCAATCACAGCTCACTGCAGCCTCGACATCCTGGGCTCAAGCACTCCTCCCACCTCAGCCTTCTGTGTAGCTGGGACTTACAGGTGTGTACCAACATGCCCTGGTTAATTTTTAAAATTTATAGAAATGGGGTCTCACCATGTTGCCCAGGCTGGTCTCAAACTCCAGGGCTCAAGCAATCTTTTTGCCTCTGCCTCCCAAAGGATTATAGGTGTGAGTCAATGCGCCTGGCCCCACTCAACTTTCAAGATTACTTTCCATGCAACAGCTGAGAGTGATGGCAGAACACCATTTTGAGAACTGGCTCCCAGGACAGGTCCTGGCAATGTTAGAAAATGCACAGCTCATTTTTAGGCCCTCCAGTTCCTTTCATCCATTTGTCAGCTATTTATTGAGCTGTGGGCTATTTATTGAGCTGGAGGGACTCAGAGGGAAGACAACAGCCTCAAGGTTCCTGCCTTCATGAACATATTCTCTGTCCTGCTCACTCCTTTTGGGGCTTATTTTCTCCTACTTTTGCTTTTAGTGGATTTTAGATTCAGACTCTACCTTCCCTTTAGTCAAAACTCTACGACAACAATCTAATAAACTCATTTCCTCTAAAGATTACATTACTCAGGATCCTTCTTCTCCAGGAGAGATTATATTTTAACTGAAAATAAAGCTTTGTTCCATTTGTCACGACCCTCGTAATAGCAATGAAGAAGGCATTCCTAGCCTCTAGGATGTCCTATCATGTAGGCAGCTAACTATCTCACCAGCAAGAAACGCCAGGAGACTTTCGGATCCCAGCCTGGGGTGGGGGTAACGTACTGATAATAAGGACAGCTACCACTTACTTGAGTATTTCTATGAATAACTCAATGTGCCAACTTCTCTGCTTGTATTATTTTATTCTAATTTTTGAGAAGCCCTAGGAGACACATGTACTGATGTTATTCAACATCTTTTCACAAAAGAAATCAGAGGCTTATGGAGACAAGTAGAAAACTTGAAGGACAAATTCAGGAGTTGATTTTCTTGAAAGGGGAAATACTGCTAAACATAAATTACAAATACGTTTTCAGTTCCCTTTCATCAGTTATATAGAACAACTACATGCTGGGAATATCTAATCAGTTTAGCAGGAACATGTGTTTCAAAAGGGATGGTAAATTCATGTATCTGTATCTCTAAACCTTTAGAGCTTCTATGTAGAGGTCATAAAATGCTTTTCTTAATTAGATTTATGAGTACATCACAATCAAGATTTGATTTAATTTCAGGTTTTTTGGGCCTTTTGAAAGTAGACATAGATAAGCATCAGATGATTAGTTTAGTTTATTACAGTTGCCTCCAGAGAAAATCCTTTATCTTTTATAATTCAGCTGTAACGGCAGAATATCACCATCATCACACTAGGCAACACTCTTTTCTTAGAGTAAATTTAATTACAGAATCCCAGAAATGAGAATTAAAGAAG	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3193:HG4_PB_pbsv_5262:HG3_PB_assemblyticsfalcon_20541:HG2_PB_assemblyticsfalcon_20617:HG2_10X_allpass_860:HG2_PB_assemblyticsPBcR_19943:HG3_10X_allpass_1063:HG2_Ill_tnscope_591:HG4_PB_SVrefine2PBcRDovetail_2673:HG4_Ill_SVrefine2DISCOVARDovetail_3997:HG4_Ill_MetaSV_3993:HG3_PB_pbsv_5100:HG3_PB_SVrefine2PBcRDovetail_2430:HG3_Ill_SVrefine2DISCOVARDovetail_4084:HG3_Ill_GATKHCSBGrefine_3573:HG2_PB_pbsv_5234:HG2_PB_SVrefine2PBcRplusDovetail_8546:HG2_PB_SVrefine2PB10Xhap12_3791:HG2_PB_SVrefine2Falcon2Bionano_2560:HG2_PB_SVrefine2Falcon1plusDovetail_9187:HG2_Ill_SVrefine2DISCOVARplusDovetail_10025:HG2_Ill_MetaSV_3826:HG2_Ill_GATKHCSBGrefine_3603:HG2_10X_SVrefine210Xhap12_3833:HG2_Ill_SpiralSDKrefine_13059:HG4_10X_allpass_1013:HG3_Ill_MetaSV_4006:HG3_Ill_Krunchall_7455:HG4_Ill_Krunchall_7842:HG2_Ill_Krunchall_7560:HG4_PB_assemblyticsfalcon_20144;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3833:HG2_Ill_GATKHCSBGrefine_3603:HG2_Ill_MetaSV_3826:HG2_Ill_SVrefine2DISCOVARplusDovetail_10025:HG2_PB_SVrefine2Falcon1plusDovetail_9187:HG2_PB_SVrefine2Falcon2Bionano_2560:HG2_PB_SVrefine2PB10Xhap12_3791:HG2_PB_SVrefine2PBcRplusDovetail_8546:HG2_PB_pbsv_5234:HG3_Ill_GATKHCSBGrefine_3573:HG3_Ill_SVrefine2DISCOVARDovetail_4084:HG3_PB_SVrefine2PBcRDovetail_2430:HG3_PB_pbsv_5100:HG4_Ill_MetaSV_3993:HG4_Ill_SVrefine2DISCOVARDovetail_3997:HG4_PB_SVrefine2PBcRDovetail_2673;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0191524;ClusterMaxSizeDiff=0.0191524;ClusterMaxEditDist=0.0199674;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2438;DistBack=26990;DistForward=-2435;DistMin=-2435;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:186441636-186444075;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3015.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:80:1/1:0:29:0:12:./.:0:0:0:0:1/1:0:38:1/1:2:188:2442:.:.
chr4	187213954	HG2_Ill_SVrefine2DISCOVARplusDovetail_10031	CAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAATAGAATGCATCTTTCCCTTTGCTCGTGTGAGAGGATTTTCAACATCCCAGCCCGCAGCATCCCAGAGCTCAGGTGTAGGGAATTTCCCGACTGCACGGACGCTCTGCCGGCCCCATGTGGTCAGGGCAATCCTCTCTTTGAATGTCCTTTCCACAAGATGTCTGTGAGGCCACCTGTCACCTGGGAGGGCTTCCCTTTGTCCAGGCAGAGGTGGTGGCCACAGCATCACGGCTTCCCAGTGCGCCCTGTGAGCCCCACCCCAACTCTCCCGCCTGCTTCCCGCCTGTTGTATGCACGCGTGTTCATTAACCACAGCAGGCCAAGCTTCTTTCAGGAGAACATTTCTTCCTTTTCCAAGGCAATCCCACAAACTAAAAATAACTGTTTAGAGCAATTCTTCAATGAGGAATGTCCGTGTGTGTGTGTGTGTCTGTGTGTGTCCGTGTGTGTGTGTGTGTGTGTGTGTTTGAGAGAAAGAGAGAGAGAGAATGAAAATGAAAACAGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCACCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGTCAGAGCCTGGGCGACAGAGCAAGACTCCGTCTCAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3841:HG2_PB_assemblyticsfalcon_20636:HG2_PB_assemblyticsPBcR_19958:HG4_PB_assemblyticsfalcon_20159:HG3_10X_allpass_1064:HG2_10X_allpass_861:HG4_PB_SVrefine2Falcon1Dovetail_3200:HG4_Ill_SVrefine2DISCOVARDovetail_3999:HG4_Ill_MetaSV_3997:HG4_10X_allpass_1015:HG3_Ill_MetaSV_4010:HG2_PB_SVrefine2PBcRplusDovetail_8551:HG2_PB_SVrefine2PB10Xhap12_3796:HG2_PB_SVrefine2Falcon2Bionano_2564:HG2_PB_SVrefine2Falcon1plusDovetail_9196:HG2_PB_HySA_9897:HG2_Ill_SVrefine2DISCOVARplusDovetail_10031:HG2_Ill_MetaSV_3828:HG2_Ill_SpiralSDKrefine_13067:HG4_Ill_Spiral_431:HG3_Ill_Spiral_5840:HG2_Ill_Spiral_383:HG4_PB_pbsv_5276:HG4_Ill_GATKHCSBGrefine_3756:HG3_PB_pbsv_5109:HG3_Ill_GATKHCSBGrefine_3577:HG2_PB_pbsv_5244:HG2_Ill_GATKHCSBGrefine_3607:HG2_Ill_tnscope_592:HG4_PB_SVrefine2PBcRDovetail_2679:HG3_PB_SVrefine2Falcon1Dovetail_3242:HG2_Ill_SVrefine2DISCOVARplusDovetail_10030;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_MetaSV_3828:HG2_Ill_SVrefine2DISCOVARplusDovetail_10031:HG2_PB_HySA_9897:HG2_PB_SVrefine2Falcon1plusDovetail_9196:HG2_PB_SVrefine2Falcon2Bionano_2564:HG2_PB_SVrefine2PB10Xhap12_3796:HG2_PB_SVrefine2PBcRplusDovetail_8551:HG3_Ill_MetaSV_4010:HG4_10X_allpass_1015:HG4_Ill_MetaSV_3997:HG4_Ill_SVrefine2DISCOVARDovetail_3999;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0685112;ClusterMaxSizeDiff=0.0685112;ClusterMaxEditDist=0.0685112;PBcalls=14;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-783;DistBack=40152;DistForward=-762;DistMin=-762;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=54;REFWIDENED=4:187213925-187214761;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3017.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:94:1/1:1:8:0:14:./.:0:0:0:0:1/1:0:15:./.:3:27:.:.:.
chr4	187353430	HG2_PB_SVrefine2PB10Xhap12_3798	GACCCACGCATAACTATCATACTTCCCAACGCTGTGCACACACGGCATTACCCACCCGTAACCATCATACTTCCTAACACGGCACACACGACATTACCCACCCATAACCATCATACTTCCTAACACCGCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCTAACACCGCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCTAACACCGCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCGCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCTAACACCACACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACAACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGGCATTACCCACTCATAACCATCATACTTCCTAACGCCCCACACACGGCATTACCCACTCATAACCATCATACTTCCTAACGCCGCACACACGGCATTACCCACCCGTAACCATCATACTTCCTAACACCGCACACACGACATTACCCACTCGTAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGGCATTACCCACTCATAACCATCATACTTCCTAACGCCCCACACACGGCATTACCCACTCATAACCATCATACTTCCTAACGCCGCACACACGGCATTACCCACCCGTAACCATCATACTTCCTAACACCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGGCATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGGCATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCGCACACACGGCATTACCCACCCGTAACCATCATACTTCCTAACACCACACACACGACATTACCCACTCGTAACCATCATACTTCCTAACGCCCCACACATGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCGCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCTAAGGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACAACATTACCCACCCGTAACCATCATACTTCCTAACGCCGCACACACGGCATTACCCACCCATAACCATCATACTTCCTAACGCCGCACACACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCGCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCTAACGCCCCACACACGACATTAACCACTCGTAACCATCATACTTCCTAAGGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACAACATTACCCACCCGTAGCCATCATACTTCCTAACGCCGCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACAACATTACCCACCCGTAACCATCATACTTCCTAACGCCGCACACACGGCATTACCCAGCTCATAACCCATCATACTGTCCTAACGCCGCACACACATTACCCACCCATAACCATGCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCGCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCTAACGCCCCACACACGACATTAACCACTCGTAACCATCATACTTCCTAAGGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACAACATTACCCACCCGTAGCCATCATACTTCCTAACGCCGCACACACGGCATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACAACATTACCCACCCGTAACCATCATACTTCCTAATGCCCCACACACAACATTACCCACTCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCTAACACCCCACACATGACATTACCCACCCATAACCATCATACTTCCTAACGCCGCACACACGGCATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCGCACACACGACATTACCCACCCGTAACCATCATACTTCCTAACGCCGCACACACGGCATTACCCACCCGTAACCATCATACTTCCTAACACCGCACACACGACATTACCCACTCGTAACCATCATACTTCCTAACGCCGCACACACGGCATTACCCACCCATAACCATCATACTTCCTAACGCACCAAACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACAACATTACCCACTCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCGTAACCATCATACTTCCTAAGGCCGCACACACGGCATTACCCACCCATAACCATCATACTTCCTAATGCACCAAACACGACATTACCCACTCGTAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACTCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGGCATTACCCACTCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCGTAACCATCATACTTCCTAACGCCGCACACACGGCATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGGCATTACCCACTCGTAACCATCATACTTCCTAACGCCCCACACACGGCATT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9198:HG2_PB_pbsv_5250:HG4_PB_pbsv_5280:HG2_PB_PB10Xdip_21804:HG4_PB_pbsv_5279:HG3_Ill_MetaSV_4011:HG4_Ill_MetaSV_3998:HG3_PB_pbsv_5112:HG2_PB_pbsv_5249:HG4_PB_SVrefine2PBcRDovetail_2682:HG4_PB_SVrefine2Falcon1Dovetail_3203:HG3_PB_SVrefine2PBcRDovetail_2433:HG3_PB_SVrefine2Falcon1Dovetail_3245:HG2_PB_SVrefine2PBcRplusDovetail_8554:HG2_PB_SVrefine2PB10Xhap12_3798:HG2_PB_SVrefine2Falcon2Bionano_2566;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9198:HG4_PB_SVrefine2PBcRDovetail_2682:HG4_PB_SVrefine2Falcon1Dovetail_3203:HG3_PB_SVrefine2PBcRDovetail_2433:HG3_PB_SVrefine2Falcon1Dovetail_3245:HG2_PB_SVrefine2PBcRplusDovetail_8554:HG2_PB_SVrefine2PB10Xhap12_3798:HG2_PB_SVrefine2Falcon2Bionano_2566;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0686197;ClusterMaxSizeDiff=0.0686197;ClusterMaxEditDist=0.0696754;PBcalls=14;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-3702;DistBack=3883;DistForward=-3661;DistMin=-3661;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=629;REFWIDENED=4:187353431-187357761;PctSeqSimilarity=0.9639;PctSizeSimilarity=0.9995;PctRecOverlap=0.9908;SizeDiff=2;StartDistance=-34;EndDistance=-32;GTMatch=0;TruScore=98;MatchId=3018.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:38:./.:14:19:9:4:./.:0:0:0:0:0/1:16:6:0/1:16:91:4665:8036:.
chr4	187378707	HG2_PB_SVrefine2PB10Xhap12_3799	ACAAAGTACTTGCTACCTGGGTTACCTGTTAAGACCACAGATCCCGCCAGAGCATATCCTGGTCCCTGTGACGC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_5251:HG2_PB_HySA_9902:HG3_PB_HySA_8141:HG3_PB_pbsv_5113:HG3_PB_SVrefine2Falcon1Dovetail_3246:HG3_Ill_svaba_6905:HG3_Ill_scalpel_5320:HG3_Ill_manta_1239:HG3_Ill_Krunchall_7465:HG3_Ill_GATKHC_8843:HG3_Ill_GATKHCSBGrefine_3578:HG3_Ill_250bpfermikitraw_7171:HG3_Ill_150bpfermikitraw_6996:HG3_10X_allpass_1065:HG2_PB_SVrefine2PB10Xhap12_3799:HG2_PB_SVrefine2Falcon1plusDovetail_9199:HG2_Ill_svaba_6771:HG2_Ill_scalpel_5208:HG2_Ill_manta_1507:HG2_Ill_breakscan11_736:HG2_Ill_SpiralSDKrefine_13070:HG2_Ill_SVrefine2DISCOVARplusDovetail_10033:HG2_Ill_Krunchall_7569:HG2_Ill_GATKHC_8818:HG2_Ill_GATKHCSBGrefine_3609:HG2_Ill_250bpfermikitraw_7390:HG2_Ill_150bpfermikitraw_6904:HG2_10X_allpass_862:HG3_Ill_Spiral_5844:HG2_Ill_Spiral_384;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_862:HG2_Ill_150bpfermikitraw_6904:HG2_Ill_250bpfermikitraw_7390:HG2_Ill_GATKHCSBGrefine_3609:HG2_Ill_GATKHC_8818:HG2_Ill_Krunchall_7569:HG2_Ill_SVrefine2DISCOVARplusDovetail_10033:HG2_Ill_SpiralSDKrefine_13070:HG2_Ill_breakscan11_736:HG2_Ill_manta_1507:HG2_Ill_scalpel_5208:HG2_Ill_svaba_6771:HG2_PB_SVrefine2Falcon1plusDovetail_9199:HG2_PB_SVrefine2PB10Xhap12_3799:HG3_10X_allpass_1065:HG3_Ill_150bpfermikitraw_6996:HG3_Ill_250bpfermikitraw_7171:HG3_Ill_GATKHCSBGrefine_3578:HG3_Ill_GATKHC_8843:HG3_Ill_Krunchall_7465:HG3_Ill_manta_1239:HG3_Ill_scalpel_5320:HG3_Ill_svaba_6905:HG3_PB_SVrefine2Falcon1Dovetail_3246:HG3_PB_pbsv_5113;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0408163;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.0689655;PBcalls=7;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-73;DistBack=8279;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=4:187378708-187378782;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3019.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:31:./.:8:21:16:6:./.:0:0:0:0:0/1:29:21:./.:.:.:4665:.:.
chr4	187614516	HG2_Ill_manta_1509	TGTGGCTGGATGAACGAACTGTGTCACAGCACGTGGGAGATGACAGTGGAGGAGTTCTGAGCCTTGGCCCAGCGGATTTGCTGCTTTCCTCGAGCACCCAGAACCCCGAGACCACCATGTAAACGGGTCCAGGACAGGCTGCGGGATGATCACAGACACAGGGCCTAGGAGCTGCTGCCTGCAGCGAACACCCAGCCACCTCCTGGGAGCAGGGCCCTCGAGCTCAACAGCAACTGATCAAACATGAGTCAGCCCGTGGAAAACAGCCAAGGAAACACCCAGCTGAGCCCAGCCCAAATCGCCCACCCACAGAACGGTGACCCAAATGA	T	20	PASS	ClusterIDs=HG2_Ill_Cortex_6765:HG4_10X_allpass_1017:HG2_10X_allpass_863:HG4_PB_pbsv_5287:HG2_PB_SVrefine2PB10Xhap12_3805:HG2_PB_PB10Xdip_21808:HG2_PB_PB10Xdip_21809:HG4_Ill_Krunchall_7862:HG2_PB_pbsv_5257:HG2_Ill_Krunchall_7576:HG2_PB_assemblyticsfalcon_20651:HG4_Ill_Spiral_432:HG2_Ill_tnscope_593:HG2_Ill_MetaSV_3829:HG4_Ill_manta_1323:HG4_Ill_MetaSV_4000:HG4_Ill_GATKHCSBGrefine_3760:HG2_PB_SVrefine2PB10Xhap12_3804:HG2_PB_SVrefine2Falcon1plusDovetail_9203:HG2_Ill_scalpel_5212:HG2_Ill_manta_1509:HG2_Ill_GATKHCSBGrefine_3611:HG2_10X_SVrefine210Xhap12_3846:HG4_Ill_Cortex_2824:HG3_Ill_Cortex_2841;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3846:HG2_Ill_GATKHCSBGrefine_3611:HG2_Ill_manta_1509:HG2_Ill_scalpel_5212:HG2_PB_PB10Xdip_21809:HG4_Ill_manta_1323:HG4_Ill_MetaSV_4000:HG4_Ill_GATKHCSBGrefine_3760:HG2_PB_SVrefine2PB10Xhap12_3804:HG2_PB_SVrefine2Falcon1plusDovetail_9203;NumExactMatchSVs=10;ClusterMaxShiftDist=0.105882;ClusterMaxSizeDiff=0.105882;ClusterMaxEditDist=0.105882;PBcalls=8;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=33511;DistForward=8288;DistMin=8288;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=4:187614517-187614848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3020.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:24:0|1:37:1:2:17:./.:0:0:0:0:0/1:42:15:0/1:18:7:.:.:.
chr4	187795697	HG4_Ill_scalpel_5114	GCAACAAATTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG4_PB_HySA_7901:HG4_PB_assemblyticsfalcon_20173:HG3_PB_assemblyticsfalcon_20570:HG2_PB_assemblyticsPBcR_19972:HG2_PB_assemblyticsfalcon_20654:HG4_Ill_Krunchall_7865:HG2_Ill_Krunchall_7579:HG3_Ill_Spiral_5848:HG2_PB_pbsv_5261:HG3_PB_HySA_8157:HG4_PB_pbsv_5290:HG2_PB_HySA_9913:HG4_Ill_MetaSV_4002:HG3_Ill_MetaSV_4014:HG2_Ill_tnscope_594:HG2_Ill_MetaSV_3830:HG4_PB_SVrefine2PBcRDovetail_2686:HG4_PB_SVrefine2Falcon1Dovetail_3208:HG4_Ill_svaba_6898:HG4_Ill_scalpel_5114:HG4_Ill_manta_1324:HG4_Ill_SVrefine2DISCOVARDovetail_4005:HG4_Ill_GATKHCSBGrefine_3764:HG4_10X_allpass_1018:HG3_PB_pbsv_5123:HG3_PB_SVrefine2PBcRDovetail_2437:HG3_PB_SVrefine2Falcon1Dovetail_3250:HG3_Ill_svaba_6914:HG3_Ill_scalpel_5323:HG3_Ill_manta_1242:HG3_Ill_SVrefine2DISCOVARDovetail_4092:HG3_Ill_GATKHCSBGrefine_3581:HG3_10X_allpass_1066:HG2_PB_SVrefine2PBcRplusDovetail_8558:HG2_PB_SVrefine2PB10Xhap12_3809:HG2_PB_SVrefine2Falcon2Bionano_2573:HG2_PB_SVrefine2Falcon1plusDovetail_9206:HG2_Ill_svaba_6780:HG2_Ill_scalpel_5213:HG2_Ill_manta_1510:HG2_Ill_SVrefine2DISCOVARplusDovetail_10037:HG2_Ill_GATKHCSBGrefine_3614:HG2_10X_allpass_864:HG2_10X_SVrefine210Xhap12_3848:HG2_Ill_breakscan11_739;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3848:HG2_10X_allpass_864:HG2_Ill_GATKHCSBGrefine_3614:HG2_Ill_SVrefine2DISCOVARplusDovetail_10037:HG2_Ill_manta_1510:HG2_Ill_scalpel_5213:HG2_Ill_svaba_6780:HG2_PB_SVrefine2Falcon1plusDovetail_9206:HG2_PB_SVrefine2Falcon2Bionano_2573:HG2_PB_SVrefine2PB10Xhap12_3809:HG2_PB_SVrefine2PBcRplusDovetail_8558:HG3_10X_allpass_1066:HG3_Ill_GATKHCSBGrefine_3581:HG3_Ill_SVrefine2DISCOVARDovetail_4092:HG3_Ill_manta_1242:HG3_Ill_scalpel_5323:HG3_Ill_svaba_6914:HG3_PB_SVrefine2Falcon1Dovetail_3250:HG3_PB_SVrefine2PBcRDovetail_2437:HG3_PB_pbsv_5123:HG4_10X_allpass_1018:HG4_Ill_GATKHCSBGrefine_3764:HG4_Ill_SVrefine2DISCOVARDovetail_4005:HG4_Ill_manta_1324:HG4_Ill_scalpel_5114:HG4_Ill_svaba_6898:HG4_PB_SVrefine2Falcon1Dovetail_3208:HG4_PB_SVrefine2PBcRDovetail_2686;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0988836;ClusterMaxSizeDiff=0.0988836;ClusterMaxEditDist=0.102073;PBcalls=18;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-651;DistForward=-305;DistMin=-651;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:187795698-187796033;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3021.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:0:26:1:22:./.:0:0:0:0:1/1:0:43:0/1:3:10:.:.:.
chr4	187850837	HG4_Ill_SVrefine2DISCOVARDovetail_4006	GGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3850:HG3_PB_assemblyticsfalcon_20573:HG2_PB_assemblyticsfalcon_20658:HG2_PB_assemblyticsPBcR_19976:HG4_PB_SVrefine2PBcRDovetail_2688:HG4_Ill_SVrefine2DISCOVARDovetail_4006:HG3_PB_SVrefine2Falcon1Dovetail_3251:HG3_Ill_SVrefine2DISCOVARDovetail_4094:HG2_PB_SVrefine2PBcRplusDovetail_8559:HG2_PB_SVrefine2Falcon1plusDovetail_9207:HG4_Ill_Krunchall_7868:HG3_Ill_Krunchall_7475:HG2_PB_pbsv_5262:HG3_PB_pbsv_5124:HG4_PB_pbsv_5291:HG4_Ill_GATKHCSBGrefine_3765:HG3_Ill_GATKHCSBGrefine_3582:HG2_Ill_GATKHCSBGrefine_3615;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9207:HG2_PB_SVrefine2PBcRplusDovetail_8559:HG3_Ill_SVrefine2DISCOVARDovetail_4094:HG3_PB_SVrefine2Falcon1Dovetail_3251:HG4_Ill_SVrefine2DISCOVARDovetail_4006:HG4_PB_SVrefine2PBcRDovetail_2688;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0223048;ClusterMaxSizeDiff=0.0223048;ClusterMaxEditDist=0.133333;PBcalls=10;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-133;DistBack=125;DistForward=20783;DistMin=125;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=153;REFWIDENED=4:187850684-187850969;PctSeqSimilarity=0.9684;PctSizeSimilarity=0.9925;PctRecOverlap=0.0667;SizeDiff=-1;StartDistance=126;EndDistance=125;GTMatch=0;TruScore=67;MatchId=3022.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:24:0|1:26:0:4:23:./.:0:0:0:0:0/1:43:9:./.:.:.:.:.:.
chr4	188959366	HG4_Ill_manta_1325	ATCAAATTGCCTTTTTGTTTTGCTAATATTTAATACTCATGATAAAAAGATTTTAGACTGTAGCAGGTTTTTCTTTTTAACCCTGGTTATATTATTTGGCATGATTCAGATGTTGAAGTAGCC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_385:HG2_PB_HySA_9931:HG4_Ill_Krunchall_7881:HG3_Ill_Krunchall_7486:HG2_Ill_Krunchall_7597:HG4_PB_HySA_7923:HG4_Ill_Spiral_434:HG2_PB_HySA_9930:HG3_PB_pbsv_5136:HG2_PB_pbsv_5276:HG3_PB_HySA_8181:HG3_Ill_MetaSV_4018:HG4_PB_pbsv_5306:HG4_PB_assemblyticsfalcon_20197:HG4_PB_SVrefine2PBcRDovetail_2695:HG4_PB_SVrefine2Falcon1Dovetail_3217:HG4_Ill_svaba_6916:HG4_Ill_scalpel_5127:HG4_Ill_manta_1325:HG4_Ill_SVrefine2DISCOVARDovetail_4015:HG4_Ill_MetaSV_4005:HG4_Ill_GATKHC_8919:HG4_Ill_GATKHCSBGrefine_3770:HG4_10X_allpass_1019:HG3_PB_assemblyticsfalcon_20592:HG3_PB_SVrefine2PBcRDovetail_2449:HG3_PB_SVrefine2Falcon1Dovetail_3261:HG3_Ill_svaba_6924:HG3_Ill_scalpel_5329:HG3_Ill_manta_1243:HG3_Ill_SVrefine2DISCOVARDovetail_4104:HG3_Ill_GATKHCSBGrefine_3586:HG3_Ill_150bpfermikitraw_7011:HG3_CG_vcfBeta_3012:HG3_10X_allpass_1069:HG2_PB_assemblyticsfalcon_20671:HG2_PB_assemblyticsPBcR_19991:HG2_PB_SVrefine2PBcRplusDovetail_8568:HG2_PB_SVrefine2PB10Xhap12_3821:HG2_PB_SVrefine2Falcon2Bionano_2582:HG2_PB_SVrefine2Falcon1plusDovetail_9215:HG2_Ill_svaba_6794:HG2_Ill_manta_1512:HG2_Ill_SVrefine2DISCOVARplusDovetail_10046:HG2_Ill_MetaSV_3833:HG2_Ill_GATKHC_8848:HG2_Ill_GATKHCSBGrefine_3618:HG2_CG_vcfBeta_3112:HG2_10X_allpass_865:HG2_10X_SVrefine210Xhap12_3858:HG2_Ill_breakscan11_743:HG3_Ill_Spiral_5861;NumClusterSVs=52;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3858:HG2_10X_allpass_865:HG2_CG_vcfBeta_3112:HG2_Ill_GATKHCSBGrefine_3618:HG2_Ill_GATKHC_8848:HG2_Ill_MetaSV_3833:HG2_Ill_SVrefine2DISCOVARplusDovetail_10046:HG2_Ill_manta_1512:HG2_Ill_svaba_6794:HG2_PB_SVrefine2Falcon1plusDovetail_9215:HG2_PB_SVrefine2Falcon2Bionano_2582:HG2_PB_SVrefine2PB10Xhap12_3821:HG2_PB_SVrefine2PBcRplusDovetail_8568:HG2_PB_assemblyticsPBcR_19991:HG2_PB_assemblyticsfalcon_20671:HG3_10X_allpass_1069:HG3_CG_vcfBeta_3012:HG3_Ill_150bpfermikitraw_7011:HG3_Ill_GATKHCSBGrefine_3586:HG3_Ill_SVrefine2DISCOVARDovetail_4104:HG3_Ill_manta_1243:HG3_Ill_scalpel_5329:HG3_Ill_svaba_6924:HG3_PB_SVrefine2Falcon1Dovetail_3261:HG3_PB_SVrefine2PBcRDovetail_2449:HG3_PB_assemblyticsfalcon_20592:HG4_10X_allpass_1019:HG4_Ill_GATKHCSBGrefine_3770:HG4_Ill_GATKHC_8919:HG4_Ill_MetaSV_4005:HG4_Ill_SVrefine2DISCOVARDovetail_4015:HG4_Ill_manta_1325:HG4_Ill_scalpel_5127:HG4_Ill_svaba_6916:HG4_PB_SVrefine2Falcon1Dovetail_3217:HG4_PB_SVrefine2PBcRDovetail_2695:HG4_PB_assemblyticsfalcon_20197:HG4_PB_pbsv_5306;NumExactMatchSVs=38;ClusterMaxShiftDist=0.0162602;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.0163934;PBcalls=19;Illcalls=27;TenXcalls=4;CGcalls=2;PBexactcalls=13;Illexactcalls=19;TenXexactcalls=4;CGexactcalls=2;HG2count=21;HG3count=16;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-122;DistBack=143;DistForward=28371;DistMin=143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=4:188959367-188959492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3024.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:30:0:23:./.:0:0:0:0:1/1:0:25:./.:.:.:.:.:.
chr4	189448748	HG4_Ill_250bpfermikitraw_7478	GAGAGAAAGAACACATAGTTTAGAGGACTTTTATAGAGAAAGAACACATAGTTTAGAGGACTTTTAT	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6935:HG3_PB_pbsv_5154:HG2_PB_pbsv_5291:HG4_PB_pbsv_5317:HG4_PB_SVrefine2Falcon1Dovetail_3222:HG4_Ill_svaba_6929:HG4_Ill_GATKHCSBGrefine_3772:HG4_Ill_250bpfermikitraw_7478:HG4_Ill_150bpfermikitraw_7167:HG3_Ill_svaba_6935:HG3_Ill_GATKHCSBGrefine_3594:HG3_Ill_250bpfermikitraw_7202:HG3_Ill_150bpfermikitraw_7020:HG2_Ill_svaba_6804:HG2_Ill_SpiralSDKrefine_13093:HG2_Ill_GATKHCSBGrefine_3628;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6935:HG4_PB_SVrefine2Falcon1Dovetail_3222:HG4_Ill_svaba_6929:HG4_Ill_GATKHCSBGrefine_3772:HG4_Ill_250bpfermikitraw_7478:HG4_Ill_150bpfermikitraw_7167:HG3_Ill_svaba_6935:HG3_Ill_GATKHCSBGrefine_3594:HG3_Ill_250bpfermikitraw_7202:HG3_Ill_150bpfermikitraw_7020:HG2_Ill_svaba_6804:HG2_Ill_SpiralSDKrefine_13093:HG2_Ill_GATKHCSBGrefine_3628;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0151515;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.030303;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=18630;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=134;REFWIDENED=4:189448749-189448948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3025.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:63:./.:0:8:1:1:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr4	189785585	HG2_Ill_250bpfermikitraw_7429	ATCTTCATCCAGACCCAAGGCCCAATCTCCCTTCCCTGTGGAGCGTCACCCCATCTTCTCCTTCCCTGTGCAGGGTCACCCCG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_5321:HG2_PB_assemblyticsfalcon_20691:HG2_PB_HySA_9952:HG4_Ill_Krunchall_7893:HG4_Ill_GATKHC_8934:HG4_Ill_GATKHCSBGrefine_3776:HG4_Ill_250bpfermikitraw_7482:HG4_Ill_150bpfermikitraw_7170:HG3_Ill_Krunchall_7494:HG3_Ill_GATKHC_8886:HG3_Ill_GATKHCSBGrefine_3596:HG3_Ill_250bpfermikitraw_7204:HG3_Ill_150bpfermikitraw_7024:HG2_Ill_SpiralSDKrefine_13095:HG2_Ill_Krunchall_7610:HG2_Ill_GATKHC_8865:HG2_Ill_GATKHCSBGrefine_3632:HG2_Ill_250bpfermikitraw_7429:HG2_Ill_150bpfermikitraw_6940:HG3_PB_pbsv_5157:HG2_PB_pbsv_5295;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6940:HG2_Ill_250bpfermikitraw_7429:HG2_Ill_GATKHCSBGrefine_3632:HG2_Ill_GATKHC_8865:HG2_Ill_Krunchall_7610:HG2_Ill_SpiralSDKrefine_13095:HG3_Ill_150bpfermikitraw_7024:HG3_Ill_250bpfermikitraw_7204:HG3_Ill_GATKHCSBGrefine_3596:HG3_Ill_GATKHC_8886:HG3_Ill_Krunchall_7494:HG4_Ill_150bpfermikitraw_7170:HG4_Ill_250bpfermikitraw_7482:HG4_Ill_GATKHCSBGrefine_3776:HG4_Ill_GATKHC_8934:HG4_Ill_Krunchall_7893;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.0727273;PBcalls=5;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-82;DistBack=24897;DistForward=-44;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=181;REFWIDENED=4:189785438-189785700;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3026.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:11:93:1/1:3:16:1:10:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr4	189898188	HG2_PB_SVrefine2PB10Xhap12_3838	AAAGCCCCACAGTGCAGGTGTTTCTGTCCTTAGAGCAATGCTCTGCTCAGGGCCCTCACACTCTCCCTCTTCTCCAGCATTGCTT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3838:HG3_PB_pbsv_5163:HG2_PB_pbsv_5306:HG3_Ill_250bpfermikitraw_7208:HG2_PB_SVrefine2Falcon1plusDovetail_9238:HG3_PB_SVrefine2PBcRDovetail_2462:HG3_Ill_SVrefine2DISCOVARDovetail_4118:HG2_PB_SVrefine2PBcRplusDovetail_8586;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3838:HG3_PB_SVrefine2PBcRDovetail_2462:HG3_Ill_SVrefine2DISCOVARDovetail_4118:HG2_PB_SVrefine2PBcRplusDovetail_8586;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0946746;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-84;DistBack=1740;DistForward=113;DistMin=113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=342;REFWIDENED=4:189898189-189898614;PctSeqSimilarity=0.9785;PctSizeSimilarity=0.9767;PctRecOverlap=0.4943;SizeDiff=-2;StartDistance=-42;EndDistance=-44;GTMatch=0;TruScore=81;MatchId=3027.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:21:0|1:19:4:4:14:./.:0:0:0:0:0/0:35:0:./.:.:.:.:2079:.
chr4	189969676	HG3_Ill_scalpel_5340	TGAGCATGCTAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCCCGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_387:HG3_PB_SVrefine2Falcon1Dovetail_3282:HG4_Ill_Krunchall_7900:HG3_PB_assemblyticsfalcon_20621:HG3_Ill_Krunchall_7501:HG2_Ill_Krunchall_7617:HG4_PB_HySA_7961:HG4_Ill_Spiral_436:HG3_Ill_Spiral_5873:HG2_PB_HySA_9970:HG4_PB_pbsv_5339:HG3_PB_pbsv_5168:HG2_PB_pbsv_5311:HG4_Ill_MetaSV_4015:HG3_Ill_MetaSV_4030:HG2_Ill_tnscope_597:HG2_Ill_MetaSV_3842:HG4_PB_SVrefine2PBcRDovetail_2713:HG4_PB_SVrefine2Falcon1Dovetail_3233:HG4_Ill_svaba_6940:HG4_Ill_scalpel_5139:HG4_Ill_SVrefine2DISCOVARDovetail_4026:HG4_Ill_GATKHCSBGrefine_3780:HG4_10X_allpass_1023:HG3_PB_SVrefine2PBcRDovetail_2465:HG3_PB_SVrefine2Falcon1Dovetail_3281:HG3_Ill_svaba_6946:HG3_Ill_scalpel_5340:HG3_Ill_SVrefine2DISCOVARDovetail_4120:HG3_10X_allpass_1073:HG2_PB_SVrefine2PBcRplusDovetail_8589:HG2_PB_SVrefine2PB10Xhap12_3841:HG2_PB_SVrefine2Falcon2Bionano_2603:HG2_PB_SVrefine2Falcon1plusDovetail_9241:HG2_Ill_svaba_6816:HG2_Ill_scalpel_5238:HG2_Ill_manta_1515:HG2_Ill_breakscan11_749:HG2_Ill_SpiralSDKrefine_13102:HG2_Ill_SVrefine2DISCOVARplusDovetail_10055:HG2_10X_SVrefine210Xhap12_3875;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3875:HG2_Ill_SVrefine2DISCOVARplusDovetail_10055:HG2_Ill_SpiralSDKrefine_13102:HG2_Ill_breakscan11_749:HG2_Ill_manta_1515:HG2_Ill_scalpel_5238:HG2_Ill_svaba_6816:HG2_PB_SVrefine2Falcon1plusDovetail_9241:HG2_PB_SVrefine2Falcon2Bionano_2603:HG2_PB_SVrefine2PB10Xhap12_3841:HG2_PB_SVrefine2PBcRplusDovetail_8589:HG3_10X_allpass_1073:HG3_Ill_SVrefine2DISCOVARDovetail_4120:HG3_Ill_scalpel_5340:HG3_Ill_svaba_6946:HG3_PB_SVrefine2Falcon1Dovetail_3281:HG3_PB_SVrefine2PBcRDovetail_2465:HG4_10X_allpass_1023:HG4_Ill_GATKHCSBGrefine_3780:HG4_Ill_SVrefine2DISCOVARDovetail_4026:HG4_Ill_scalpel_5139:HG4_Ill_svaba_6940:HG4_PB_SVrefine2Falcon1Dovetail_3233:HG4_PB_SVrefine2PBcRDovetail_2713;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0112994;ClusterMaxSizeDiff=0.0112994;ClusterMaxEditDist=0.0112994;PBcalls=15;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-354;DistBack=12177;DistForward=-337;DistMin=-337;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=4:189969677-189970049;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3028.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:./.:0:1:0:1:./.:0:0:0:0:1/1:0:54:0/1:4:16:.:2079:.
chr4	190038494	HG2_Ill_GATKHCSBGrefine_3637	AGTATCCAAGCCGACAAAATTCCAGCACACTAGACAAAACTACAGCCAATGGCCCTCACAGAGTCCACTTTGCTTCCTCGCTACCTCCACTGGAGCAGGTGCTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3876:HG4_Ill_Krunchall_7903:HG3_Ill_Krunchall_7505:HG3_PB_HySA_8205:HG2_PB_HySA_9981:HG4_PB_assemblyticsfalcon_20229:HG4_Ill_svaba_6944:HG4_Ill_scalpel_5142:HG4_Ill_manta_1328:HG4_Ill_MetaSV_4016:HG4_Ill_GATKHC_8944:HG4_Ill_GATKHCSBGrefine_3786:HG4_10X_allpass_1024:HG3_Ill_svaba_6953:HG3_Ill_scalpel_5341:HG3_Ill_MetaSV_4031:HG3_Ill_GATKHC_8897:HG3_Ill_GATKHCSBGrefine_3600:HG3_10X_allpass_1074:HG2_PB_SVrefine2Falcon1plusDovetail_9245:HG2_Ill_svaba_6823:HG2_Ill_scalpel_5240:HG2_Ill_breakscan11_750:HG2_Ill_SpiralSDKrefine_13104:HG2_Ill_MetaSV_3844:HG2_Ill_GATKHC_8877:HG2_Ill_GATKHCSBGrefine_3637:HG4_PB_pbsv_5344:HG3_PB_pbsv_5171:HG4_PB_HySA_7970:HG2_PB_pbsv_5318:HG4_Ill_SVrefine2DISCOVARDovetail_4028:HG3_PB_SVrefine2PBcRDovetail_2467:HG2_Ill_SVrefine2DISCOVARplusDovetail_10057;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3637:HG2_Ill_GATKHC_8877:HG2_Ill_MetaSV_3844:HG2_Ill_SpiralSDKrefine_13104:HG2_Ill_breakscan11_750:HG2_Ill_scalpel_5240:HG2_Ill_svaba_6823:HG2_PB_SVrefine2Falcon1plusDovetail_9245:HG3_10X_allpass_1074:HG3_Ill_GATKHCSBGrefine_3600:HG3_Ill_GATKHC_8897:HG3_Ill_MetaSV_4031:HG3_Ill_scalpel_5341:HG3_Ill_svaba_6953:HG4_10X_allpass_1024:HG4_Ill_GATKHCSBGrefine_3786:HG4_Ill_GATKHC_8944:HG4_Ill_MetaSV_4016:HG4_Ill_manta_1328:HG4_Ill_scalpel_5142:HG4_Ill_svaba_6944:HG4_PB_assemblyticsfalcon_20229;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0287081;ClusterMaxSizeDiff=0.0287081;ClusterMaxEditDist=0.0679612;PBcalls=9;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-103;DistBack=6753;DistForward=12461;DistMin=6753;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=99;REFWIDENED=4:190038403-190038604;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3029.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:24:./.:32:12:7:9:./.:0:0:0:0:0/1:28:21:./.:.:.:.:.:.
chr4	190057998	HG3_Ill_SVrefine2DISCOVARDovetail_4122	TATAAATTACCCAGTCTAGCAATCAGCGAGACTCCGTGGGCGTAGGACCCTCCGAGCCAGTTCTTAAGATCTGCTATGAAAAATAGATAAGGATTTTGAAGTTATCCATGGACTTTTGGAGTATTGTTAATAAGAAGTCCAGAATCATCATGACTTTCAGTCTTTGATATGTGACTTGTTCTTTCTAGAACCTTATGGGAAGAGTCATGCTCCCTTTTCACTTCAAAGTGAGTGGACAGAGTGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAGGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGTAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGTGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCAAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGGGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACTCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAGTTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACACTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCACTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAACACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCGGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCATCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTCAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATCGCTTCAAAGAGAATAAAATACCTAGGAATCCAGCTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGATGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTGAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGTAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCCAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACATGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3845:HG3_10X_allpass_1075:HG2_Ill_Krunchall_7622:HG2_PB_assemblyticsPBcR_20023:HG2_PB_HySA_9984:HG2_Ill_tnscope_598:HG4_PB_SVrefine2Falcon1Dovetail_3239:HG3_PB_pbsv_5174:HG3_PB_SVrefine2PBcRDovetail_2469:HG3_PB_SVrefine2Falcon1Dovetail_3287:HG3_Ill_SVrefine2DISCOVARDovetail_4122:HG3_Ill_MetaSV_4032:HG2_PB_pbsv_5320:HG2_PB_SVrefine2PBcRplusDovetail_8592:HG2_PB_SVrefine2PB10Xhap12_3846:HG2_PB_SVrefine2Falcon2Bionano_2606:HG2_PB_SVrefine2Falcon1plusDovetail_9248:HG2_Ill_SVrefine2DISCOVARplusDovetail_10059:HG2_10X_SVrefine210Xhap12_3878;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3878:HG2_Ill_SVrefine2DISCOVARplusDovetail_10059:HG2_PB_SVrefine2Falcon1plusDovetail_9248:HG2_PB_SVrefine2Falcon2Bionano_2606:HG2_PB_SVrefine2PB10Xhap12_3846:HG2_PB_SVrefine2PBcRplusDovetail_8592:HG2_PB_pbsv_5320:HG3_Ill_MetaSV_4032:HG3_Ill_SVrefine2DISCOVARDovetail_4122:HG3_PB_SVrefine2Falcon1Dovetail_3287:HG3_PB_SVrefine2PBcRDovetail_2469:HG3_PB_pbsv_5174:HG4_PB_SVrefine2Falcon1Dovetail_3239;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0421201;ClusterMaxSizeDiff=0.0421201;ClusterMaxEditDist=0.0421201;PBcalls=11;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-6274;DistBack=-6275;DistForward=-6259;DistMin=-6275;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=4:190057999-190064288;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3030.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:73:1|0:0:37:33:1:./.:0:0:0:0:0/1:40:16:0/1:390:174:8104:.:.
chr4	190105371	HG2_PB_SVrefine2Falcon1plusDovetail_9251	GCGAGCTCAGAAACCTACCTGATAGCACAGGAGTTCCCCCACAGGACAGAGGATCCGAGCTCAGAAGCCTACCTGGTGGCATAGGAGTCCCCCACAGGACAGAGGATCCGAGCTCAGAAGCCCACCTGGTGGCATAGGAGTCCCCCACAGGGCAGAGGATCCGAGCTCAGAAGCCCACCTGGTGGCATAGGAGTTCCCTCACAGGACAGAGGATAAGAGCTCAGAAACCTACCTGATAGCACAGGAGTTCCCACACAGGACAGAGGATCCGAGCTCAGAAGCCCACCTGGTGGCATAGGAGTCCCCCACAGGACAGAGGATCCGAGCTCAGAAGCCCACCTGGTGGCATAGGAGTCCCCCCACAGGACAGATGATATGAGCTCAGAAGCCTACCTGATGGCACAGGAGTTCCCCCACAGGACAGATGATATGAGCTCAGAAGCCTACCTGATGGCACAGGAGTTCCCCCACAGGACAGATGATATGAGCTCAGAAGCCTACCTGATGGCACAGGAGTTCCCCCACAGGACAGATGATATGAGCTCAGAAGCCCACCTGGTGGCTTAGGAGTCCCCCCACAGGGCAGAGGATCCGAGCTCAGAAGCCCACCTGATGGCACAGGAGTCCCCCACAGGGCAGAGGATCCGAGCTCAGAAGCCCACCTGATGGCACAGGAGTCCCCCACAGGACAGAGGATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3881:HG2_PB_SVrefine2Falcon2Bionano_2609:HG3_10X_allpass_1076:HG2_10X_allpass_869:HG4_Ill_GATKHCSBGrefine_3789:HG3_Ill_GATKHCSBGrefine_3603:HG2_Ill_GATKHCSBGrefine_3643:HG4_10X_allpass_1025:HG2_Ill_tnscope_599:HG4_Ill_Spiral_437:HG3_Ill_Spiral_5879:HG2_Ill_Spiral_388:HG3_Ill_Krunchall_7507:HG2_Ill_Krunchall_7623:HG4_PB_pbsv_5346:HG3_PB_pbsv_5177:HG4_Ill_MetaSV_4017:HG2_Ill_MetaSV_3847:HG2_PB_pbsv_5323:HG4_PB_SVrefine2PBcRDovetail_2718:HG4_PB_SVrefine2Falcon1Dovetail_3241:HG4_Ill_SVrefine2DISCOVARDovetail_4030:HG3_PB_SVrefine2PBcRDovetail_2470:HG3_PB_SVrefine2Falcon1Dovetail_3289:HG3_Ill_SVrefine2DISCOVARDovetail_4124:HG2_PB_SVrefine2PBcRplusDovetail_8593:HG2_PB_SVrefine2PB10Xhap12_3847:HG2_PB_SVrefine2Falcon1plusDovetail_9251:HG2_Ill_SVrefine2DISCOVARplusDovetail_10062;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3881:HG4_PB_SVrefine2PBcRDovetail_2718:HG4_PB_SVrefine2Falcon1Dovetail_3241:HG4_Ill_SVrefine2DISCOVARDovetail_4030:HG3_PB_SVrefine2PBcRDovetail_2470:HG3_PB_SVrefine2Falcon1Dovetail_3289:HG3_Ill_SVrefine2DISCOVARDovetail_4124:HG2_PB_SVrefine2PBcRplusDovetail_8593:HG2_PB_SVrefine2PB10Xhap12_3847:HG2_PB_SVrefine2Falcon1plusDovetail_9251:HG2_Ill_SVrefine2DISCOVARplusDovetail_10062;NumExactMatchSVs=11;ClusterMaxShiftDist=0.398801;ClusterMaxSizeDiff=0.398801;ClusterMaxEditDist=0.398801;PBcalls=11;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-697;DistBack=-1;DistForward=-627;DistMin=-627;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=199;REFWIDENED=4:190105372-190106267;PctSeqSimilarity=0.9286;PctSizeSimilarity=1;PctRecOverlap=0.9011;SizeDiff=0;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=94;MatchId=3031.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:33:1/1:0:17:1:8:./.:0:0:0:0:0/1:14:8:0/1:17:17:8104:.:.
chr4	190153942	HG4_PB_SVrefine2Falcon1Dovetail_3242	TTTTGGTGCAGTTGGCAGTAGTGCTTCGTGGTGGTATTTCATGCAGTTGCAGTAATGCTCTGTGGTGGTGTTTGGTGTAGTTGCAGGAGTGCTCTGTGGTGGTGTTTGGTGTAGTTGTAGTAGAGCTCTGTGGTGGTGTTTGGTGTAGTTGCAGGAGTGCTCTGTGGTGGTGTTTGGTGTAGTTGCAGTACTGCTCTGTGGTGGTGTTTGGTGCAGTTGTAGTACTGCTCTGTGGTGGTGTTTGGTGTAGTTGCAGGAGTGCTCTGTGGTGGTGTTTGGTGTAGTTGTAGTAGAGCTCTGTGGTGGTGTTTGGTGTAGTTGCAGGAGTGCTCTGTGGTGGTGTTTGGTGTAGTTGCAGTACTGCTCTGTGGTGGTGTTTGGTGCAGTTGTAGTACTGCTCTGTGGTGGTGTTTGGTGTAGTTGCAGGAGTGCTCTGTGGTGGTGTTTGGTGTAGTTGTAGTAGAGCTCTGTGGTGGTGTTTGGTGTAGTTGCAGGAGTGCTCTGTGGTGGTGTTTGGTGCAGTTGTAATAGTGCTCTGTGGTGGTGTTTGGTGTAGTTGCATTTGTGCTCTGTGGTGGTGTTTGGTGCAGTTGCATTTGTGCTCTGTGGTGGTGTTTGGTGGAGTTGCATTTGTGCTCTGTGGTGGTGTTTGGTGCAGTTGGCAGTAGTGCTCTGTGGTGGTGTTTGGTGCAGTTGCAGGAGTGCTCTGTGGTGGTGTTTGGTGTAGTTGCATTTGTGCTCTGTGGTGGTGTTTGGTGTAGTTGCATTTGTGCTCTGTGGTGGTGTTTGGTGTAGTTGCATTTGTGCTCTGTGGTGGTGTTTGGTGTAGTTGCATTTGTGCTCTGTGGTGGTGTTTGGTGTAGTTGCATTTGTGCTCTGTGGTGGTGTTTGGTGTAGTTGCAGCAGTGCTCTGTGGTGGTGTTTGGTGCAGTTGCATTTGTGCTCTGTGGTGGTGTTTGGTGCAGTTGCAGGAGTGCTCTGTGGTGGTGTTCGGTGTAGTTGTAGTAGTGCTCTGTGGTGGTGTTTGGTGCAGTTGCAGGAGTGCTCTGTGGTGGTGTTTGGTGCAGTTGCATTTGTGCTCTGTGGTGGTG	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9252:HG3_PB_pbsv_5178:HG4_PB_pbsv_5347:HG3_PB_SVrefine2PBcRDovetail_2471:HG4_PB_SVrefine2Falcon1Dovetail_3242:HG3_PB_SVrefine2Falcon1Dovetail_3290:HG2_PB_SVrefine2PB10Xhap12_3848:HG2_PB_SVrefine2Falcon2Bionano_2610;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9252:HG4_PB_SVrefine2Falcon1Dovetail_3242:HG3_PB_SVrefine2Falcon1Dovetail_3290:HG2_PB_SVrefine2PB10Xhap12_3848:HG2_PB_SVrefine2Falcon2Bionano_2610;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0948938;ClusterMaxSizeDiff=0.0948938;ClusterMaxEditDist=0.0948938;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-1090;DistBack=-648;DistForward=-1091;DistMin=-1091;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1597;REFWIDENED=4:190153943-190156629;PctSeqSimilarity=0.9544;PctSizeSimilarity=0.9991;PctRecOverlap=0.4876;SizeDiff=1;StartDistance=-559;EndDistance=-558;GTMatch=0;TruScore=81;MatchId=3032.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:22:3:4:21:./.:0:0:0:0:0/0:22:0:0/1:36:13:8104:.:.
chr4	190253838	HG2_PB_SVrefine2Falcon2Bionano_2614	TGAACAGATACTTCTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_754:HG4_PB_HySA_7991:HG4_10X_allpass_1027:HG3_PB_HySA_8219:HG4_PB_assemblyticsfalcon_20239:HG3_PB_assemblyticsfalcon_20639:HG2_PB_assemblyticsPBcR_20031:HG2_PB_assemblyticsfalcon_20720:HG4_Ill_Krunchall_7904:HG3_Ill_Krunchall_7509:HG2_Ill_Krunchall_7624:HG3_PB_pbsv_5182:HG2_PB_pbsv_5330:HG4_PB_pbsv_5354:HG2_PB_HySA_9993:HG4_Ill_MetaSV_4019:HG3_Ill_MetaSV_4036:HG2_Ill_tnscope_602:HG2_Ill_MetaSV_3849:HG4_PB_SVrefine2PBcRDovetail_2722:HG4_PB_SVrefine2Falcon1Dovetail_3248:HG4_Ill_svaba_6946:HG4_Ill_scalpel_5143:HG4_Ill_manta_1329:HG4_Ill_SVrefine2DISCOVARDovetail_4032:HG4_Ill_GATKHCSBGrefine_3793:HG3_PB_SVrefine2PBcRDovetail_2473:HG3_PB_SVrefine2Falcon1Dovetail_3294:HG3_Ill_svaba_6956:HG3_Ill_manta_1249:HG3_Ill_SVrefine2DISCOVARDovetail_4128:HG3_Ill_GATKHCSBGrefine_3604:HG2_PB_SVrefine2PBcRplusDovetail_8599:HG2_PB_SVrefine2PB10Xhap12_3853:HG2_PB_SVrefine2Falcon2Bionano_2614:HG2_PB_SVrefine2Falcon1plusDovetail_9257:HG2_Ill_svaba_6827:HG2_Ill_manta_1519:HG2_Ill_SpiralSDKrefine_13107:HG2_Ill_SVrefine2DISCOVARplusDovetail_10064:HG2_Ill_GATKHCSBGrefine_3645:HG2_10X_allpass_871;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_871:HG2_Ill_GATKHCSBGrefine_3645:HG2_Ill_SVrefine2DISCOVARplusDovetail_10064:HG2_Ill_SpiralSDKrefine_13107:HG2_Ill_manta_1519:HG2_Ill_svaba_6827:HG2_PB_SVrefine2Falcon1plusDovetail_9257:HG2_PB_SVrefine2Falcon2Bionano_2614:HG2_PB_SVrefine2PB10Xhap12_3853:HG2_PB_SVrefine2PBcRplusDovetail_8599:HG3_Ill_GATKHCSBGrefine_3604:HG3_Ill_SVrefine2DISCOVARDovetail_4128:HG3_Ill_manta_1249:HG3_Ill_svaba_6956:HG3_PB_SVrefine2Falcon1Dovetail_3294:HG3_PB_SVrefine2PBcRDovetail_2473:HG4_Ill_GATKHCSBGrefine_3793:HG4_Ill_SVrefine2DISCOVARDovetail_4032:HG4_Ill_manta_1329:HG4_Ill_scalpel_5143:HG4_Ill_svaba_6946:HG4_PB_SVrefine2Falcon1Dovetail_3248:HG4_PB_SVrefine2PBcRDovetail_2722;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0947867;ClusterMaxSizeDiff=0.0947867;ClusterMaxEditDist=0.0947867;PBcalls=18;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=17755;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=4:190253839-190254175;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3033.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:1/1:0:18:0:19:./.:0:0:0:0:1/1:0:50:./.:2:13:.:.:.
chr4	190291418	HG4_Ill_scalpel_5149	TCGGAGTCATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCTGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCGCCACCACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3884:HG4_PB_pbsv_5355:HG2_Ill_Krunchall_7631:HG3_Ill_MetaSV_4037:HG2_Ill_tnscope_603:HG2_Ill_MetaSV_3851:HG4_PB_SVrefine2PBcRDovetail_2723:HG4_PB_SVrefine2Falcon1Dovetail_3249:HG4_Ill_scalpel_5149:HG4_Ill_MetaSV_4021:HG4_Ill_GATKHCSBGrefine_3794:HG4_10X_allpass_1028:HG3_PB_pbsv_5184:HG3_PB_SVrefine2PBcRDovetail_2474:HG3_PB_SVrefine2Falcon1Dovetail_3295:HG3_Ill_scalpel_5345:HG3_Ill_manta_1250:HG3_Ill_SVrefine2DISCOVARDovetail_4129:HG3_Ill_GATKHCSBGrefine_3605:HG2_PB_pbsv_5331:HG2_PB_SVrefine2PB10Xhap12_3854:HG2_PB_SVrefine2Falcon2Bionano_2615:HG2_Ill_scalpel_5245:HG2_Ill_manta_1520:HG2_Ill_breakscan11_755:HG2_Ill_SpiralSDKrefine_13109:HG2_Ill_GATKHCSBGrefine_3646:HG2_10X_allpass_872;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3884:HG4_PB_SVrefine2PBcRDovetail_2723:HG4_PB_SVrefine2Falcon1Dovetail_3249:HG4_Ill_scalpel_5149:HG4_Ill_MetaSV_4021:HG4_Ill_GATKHCSBGrefine_3794:HG4_10X_allpass_1028:HG3_PB_pbsv_5184:HG3_PB_SVrefine2PBcRDovetail_2474:HG3_PB_SVrefine2Falcon1Dovetail_3295:HG3_Ill_scalpel_5345:HG3_Ill_manta_1250:HG3_Ill_SVrefine2DISCOVARDovetail_4129:HG3_Ill_GATKHCSBGrefine_3605:HG2_PB_pbsv_5331:HG2_PB_SVrefine2PB10Xhap12_3854:HG2_PB_SVrefine2Falcon2Bionano_2615:HG2_Ill_scalpel_5245:HG2_Ill_manta_1520:HG2_Ill_breakscan11_755:HG2_Ill_SpiralSDKrefine_13109:HG2_Ill_GATKHCSBGrefine_3646:HG2_10X_allpass_872;NumExactMatchSVs=23;ClusterMaxShiftDist=0.00625;ClusterMaxSizeDiff=0.00625;ClusterMaxEditDist=0.00625;PBcalls=9;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=5846;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=4:190291419-190291750;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3034.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:48:0|1:47:1:1:42:./.:0:0:0:0:0/1:28:17:0/1:26:3:.:.:.
chr4	190329250	HG3_PB_SVrefine2Falcon1Dovetail_3299	GTGGATGAGGAAGCCATGATATAGATAGGAATGAGGAAGCCATGCTATGGACATGGATGAGGAAGCCATGCTATGGACATGGATGAGGAAGCCATGATATGGATATGGATGAGGAAGTCATGATATGGATATGGATGAGGAAGCCATGATATGGATATGGATGAAGAAGCCATGCTATGGATATGGATGAGGAAGCCATGCTATGGATATGGATGAGGAAGCCATGATATGGATA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10065:HG2_PB_pbsv_5338:HG4_PB_pbsv_5360:HG4_PB_SVrefine2PBcRDovetail_2726:HG4_PB_SVrefine2Falcon1Dovetail_3252:HG4_Ill_SVrefine2DISCOVARDovetail_4034:HG3_PB_SVrefine2Falcon1Dovetail_3299:HG2_PB_SVrefine2Falcon1plusDovetail_9260;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10065:HG4_PB_SVrefine2PBcRDovetail_2726:HG4_PB_SVrefine2Falcon1Dovetail_3252:HG4_Ill_SVrefine2DISCOVARDovetail_4034:HG3_PB_SVrefine2Falcon1Dovetail_3299:HG2_PB_SVrefine2Falcon1plusDovetail_9260;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0042735;ClusterMaxSizeDiff=0.00426439;ClusterMaxEditDist=0.0724947;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-234;DistBack=3103;DistForward=-139;DistMin=-139;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=354;REFWIDENED=4:190329251-190329838;PctSeqSimilarity=0.9519;PctSizeSimilarity=1;PctRecOverlap=0.1191;SizeDiff=0;StartDistance=-207;EndDistance=-207;GTMatch=0;TruScore=69;MatchId=3035.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:29:./.:20:5:11:17:./.:0:0:0:0:0/0:48:1:./.:.:.:.:.:.
chr5	307285	HG4_PB_SVrefine2PBcRDovetail_2748	ACCGTGCGCCTCAGAAGGGGCGTTAGGCAGAACGCGTGCCCATTCTCAGGTGTGCTCGGCGTGTGTGTGCTCGGCGTGTGTGTGCTCGGCGTGTGTGTGCACACGTGTG	A	20	PASS	ClusterIDs=HG2_Ill_manta_1526:HG4_PB_pbsv_5417:HG2_PB_pbsv_5397:HG4_PB_HySA_8028:HG4_Ill_GATKHCSBGrefine_3823:HG2_Ill_GATKHCSBGrefine_3679:HG4_PB_SVrefine2PBcRDovetail_2748:HG2_PB_SVrefine2Falcon2Bionano_2640;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_manta_1526:HG4_PB_SVrefine2PBcRDovetail_2748:HG2_PB_SVrefine2Falcon2Bionano_2640;NumExactMatchSVs=3;ClusterMaxShiftDist=0.18;ClusterMaxSizeDiff=0.18;ClusterMaxEditDist=0.18;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-108;DistBack=8401;DistForward=2272;DistMin=2272;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=181;REFWIDENED=5:307286-307574;PctSeqSimilarity=0.9289;PctSizeSimilarity=0.8611;PctRecOverlap=0.422;SizeDiff=15;StartDistance=-63;EndDistance=-48;GTMatch=0;TruScore=73;MatchId=3037.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:21:0|1:27:3:4:13:./.:0:0:0:0:0/1:23:20:./.:.:.:.:5459:.
chr5	429376	HG2_Ill_GATKHC_8952	TGGGCCGCCAGGATGCCAGAGATCCAACTTCCTCTCAGAGAATCTTGCAGGAGTGAGGTAGGGCCG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6990:HG3_PB_assemblyticsfalcon_20706:HG4_PB_assemblyticsfalcon_20289:HG2_PB_assemblyticsfalcon_20762:HG2_PB_assemblyticsPBcR_20092:HG2_PB_pbsv_5413:HG3_PB_pbsv_5253:HG4_PB_pbsv_5432:HG4_PB_HySA_8041:HG2_PB_HySA_10043:HG4_Ill_scalpel_5169:HG4_Ill_manta_1334:HG4_Ill_Krunchall_7939:HG4_Ill_GATKHC_9020:HG4_Ill_GATKHCSBGrefine_3825:HG4_Ill_250bpfermikitraw_7536:HG4_Ill_150bpfermikitraw_7230:HG3_Ill_scalpel_5367:HG3_Ill_Krunchall_7540:HG3_Ill_GATKHC_8963:HG3_Ill_GATKHCSBGrefine_3638:HG3_Ill_250bpfermikitraw_7254:HG3_Ill_150bpfermikitraw_7071:HG2_Ill_scalpel_5265:HG2_Ill_SpiralSDKrefine_13147:HG2_Ill_Krunchall_7666:HG2_Ill_GATKHC_8952:HG2_Ill_GATKHCSBGrefine_3681:HG2_Ill_250bpfermikitraw_7493;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6990:HG4_Ill_scalpel_5169:HG4_Ill_manta_1334:HG4_Ill_Krunchall_7939:HG4_Ill_GATKHC_9020:HG4_Ill_GATKHCSBGrefine_3825:HG4_Ill_250bpfermikitraw_7536:HG4_Ill_150bpfermikitraw_7230:HG3_Ill_scalpel_5367:HG3_Ill_Krunchall_7540:HG3_Ill_GATKHC_8963:HG3_Ill_GATKHCSBGrefine_3638:HG3_Ill_250bpfermikitraw_7254:HG3_Ill_150bpfermikitraw_7071:HG2_Ill_scalpel_5265:HG2_Ill_SpiralSDKrefine_13147:HG2_Ill_Krunchall_7666:HG2_Ill_GATKHC_8952:HG2_Ill_GATKHCSBGrefine_3681:HG2_Ill_250bpfermikitraw_7493;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0458015;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.0769231;PBcalls=9;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=-65;DistBack=4875;DistForward=6854;DistMin=4875;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=130;REFWIDENED=5:429298-429492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3041.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:33:./.:10:13:2:8:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr5	497816	HG2_Ill_150bpfermikitraw_6999	ATCTGCCCCTGTCCTGGGTGGGGTCGCCCGGCCGCATCCCCAGCCTCTGCCCCTGTCCCGGGTGGGGTCGCCCGGCCGCATCCCCAGCC	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_6999:HG2_PB_HySA_10061:HG2_PB_SVrefine2Falcon2Bionano_2659:HG3_PB_pbsv_5266:HG4_PB_pbsv_5444:HG4_Ill_Krunchall_7944:HG4_Ill_250bpfermikitraw_7543:HG3_PB_SVrefine2PBcRDovetail_2503:HG3_PB_SVrefine2Falcon1Dovetail_3352:HG3_Ill_svaba_7011:HG3_Ill_SVrefine2DISCOVARDovetail_4151:HG3_Ill_250bpfermikitraw_7256:HG2_PB_pbsv_5427:HG2_PB_SVrefine2PBcRplusDovetail_8663:HG2_PB_SVrefine2PB10Xhap12_3907:HG2_PB_SVrefine2Falcon1plusDovetail_9305:HG2_Ill_SVrefine2DISCOVARplusDovetail_10081:HG2_Ill_GATKHCSBGrefine_3686:HG2_Ill_250bpfermikitraw_7504;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_6999:HG4_Ill_Krunchall_7944:HG4_Ill_250bpfermikitraw_7543:HG3_PB_SVrefine2PBcRDovetail_2503:HG3_PB_SVrefine2Falcon1Dovetail_3352:HG3_Ill_svaba_7011:HG3_Ill_SVrefine2DISCOVARDovetail_4151:HG3_Ill_250bpfermikitraw_7256:HG2_PB_pbsv_5427:HG2_PB_SVrefine2PBcRplusDovetail_8663:HG2_PB_SVrefine2PB10Xhap12_3907:HG2_PB_SVrefine2Falcon1plusDovetail_9305:HG2_Ill_SVrefine2DISCOVARplusDovetail_10081:HG2_Ill_GATKHCSBGrefine_3686:HG2_Ill_250bpfermikitraw_7504;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0685714;PBcalls=10;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-88;DistBack=-45;DistForward=-89;DistMin=-89;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=139;REFWIDENED=5:497817-498043;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3042.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:46:1/1:1:11:1:16:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr5	608881	HG3_Ill_svaba_7023	TGTGGGAGCGTGCGCTGGGATGGGGAGGGGTCACTGTGAGCACGGTGCGTC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7007:HG3_Ill_GATKHC_8981:HG3_Ill_GATKHCSBGrefine_3645:HG2_Ill_GATKHC_8970:HG2_Ill_GATKHCSBGrefine_3689:HG3_Ill_manta_1258:HG2_Ill_manta_1530:HG2_Ill_SpiralSDKrefine_13158:HG3_Ill_Spiral_5923:HG2_Ill_Spiral_394:HG4_PB_assemblyticsfalcon_20308:HG4_PB_assemblyticsfalcon_20307:HG3_PB_pbsv_5281:HG3_PB_assemblyticsfalcon_20716:HG3_Ill_svaba_7023:HG3_Ill_scalpel_5374:HG3_Ill_Krunchall_7550:HG3_Ill_250bpfermikitraw_7264:HG3_Ill_150bpfermikitraw_7081:HG2_Ill_svaba_6902:HG2_Ill_scalpel_5273:HG2_Ill_Krunchall_7675:HG2_Ill_250bpfermikitraw_7511;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7007:HG4_PB_assemblyticsfalcon_20307:HG3_PB_pbsv_5281:HG3_PB_assemblyticsfalcon_20716:HG3_Ill_svaba_7023:HG3_Ill_scalpel_5374:HG3_Ill_Krunchall_7550:HG3_Ill_250bpfermikitraw_7264:HG3_Ill_150bpfermikitraw_7081:HG2_Ill_svaba_6902:HG2_Ill_scalpel_5273:HG2_Ill_Krunchall_7675:HG2_Ill_250bpfermikitraw_7511;NumExactMatchSVs=13;ClusterMaxShiftDist=0.14433;ClusterMaxSizeDiff=0.14433;ClusterMaxEditDist=0.164948;PBcalls=4;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=-1;DistForward=1758;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=57;REFWIDENED=5:608857-608963;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3044.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:0|1:22:3:3:25:./.:0:0:0:0:0/1:20:16:./.:.:.:.:.:.
chr5	976194	HG3_PB_SVrefine2PBcRDovetail_2512	CGGAACGTCGCTCAGCCCTTCTCCATCCATGGACGAATGGGTACGCGCACTGTGGTCTATTCACACAACGGAACGTCGCTCAGCCCTTCTCCATCCATGGACGAATGGGTACGCGCACTGTGGTCTATTCACACAAT	C	20	PASS	ClusterIDs=HG4_PB_HySA_8096:HG4_PB_SVrefine2PBcRDovetail_2771:HG4_Ill_SVrefine2DISCOVARDovetail_4059:HG4_Ill_250bpfermikitraw_7565:HG3_PB_SVrefine2PBcRDovetail_2512:HG2_PB_assemblyticsfalcon_20780:HG2_PB_assemblyticsPBcR_20109:HG2_PB_SVrefine2PBcRplusDovetail_8679:HG2_PB_SVrefine2PB10Xhap12_3935:HG2_PB_SVrefine2Falcon1plusDovetail_9328:HG4_PB_pbsv_5475:HG3_PB_pbsv_5296:HG2_PB_pbsv_5452;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9328:HG2_PB_SVrefine2PB10Xhap12_3935:HG2_PB_SVrefine2PBcRplusDovetail_8679:HG2_PB_assemblyticsPBcR_20109:HG2_PB_assemblyticsfalcon_20780:HG3_PB_SVrefine2PBcRDovetail_2512:HG4_Ill_250bpfermikitraw_7565:HG4_Ill_SVrefine2DISCOVARDovetail_4059:HG4_PB_SVrefine2PBcRDovetail_2771;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0145985;ClusterMaxSizeDiff=0.0145985;ClusterMaxEditDist=0.0147059;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-136;DistBack=170;DistForward=16;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1087;REFWIDENED=5:975195-976417;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3046.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:58:1|0:4:50:23:3:./.:0:0:0:0:0/1:2:8:./.:.:.:.:.:.
chr5	1206472	HG3_Ill_scalpel_5392	TCTGTCTCTGTGTGTGTGTCTCTCTCTCTCCCTGCCTCCCTCTCTGTCTCTGTCTCTCTGTGTCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3934:HG4_PB_assemblyticsfalcon_20349:HG3_PB_pbsv_5311:HG2_PB_HySA_10106:HG3_PB_HySA_8318:HG2_PB_pbsv_5467:HG2_PB_PB10Xdip_22996:HG4_PB_pbsv_5491:HG4_PB_HySA_8116:HG4_Ill_svaba_7065:HG4_Ill_scalpel_5200:HG4_Ill_manta_1339:HG4_Ill_Krunchall_7975:HG4_Ill_GATKHC_9083:HG4_Ill_GATKHCSBGrefine_3849:HG4_Ill_250bpfermikitraw_7583:HG4_Ill_150bpfermikitraw_7267:HG4_10X_allpass_1036:HG3_Ill_svaba_7060:HG3_Ill_scalpel_5392:HG3_Ill_manta_1260:HG3_Ill_Krunchall_7571:HG3_Ill_GATKHC_9020:HG3_Ill_GATKHCSBGrefine_3657:HG3_Ill_250bpfermikitraw_7290:HG3_Ill_150bpfermikitraw_7107:HG3_10X_allpass_1090:HG2_Ill_svaba_6941:HG2_Ill_scalpel_5293:HG2_Ill_manta_1532:HG2_Ill_breakscan11_778:HG2_Ill_SpiralSDKrefine_13187:HG2_Ill_Krunchall_7696:HG2_Ill_GATKHC_9006:HG2_Ill_GATKHCSBGrefine_3700:HG2_Ill_250bpfermikitraw_7543:HG2_Ill_150bpfermikitraw_7034:HG3_PB_SVrefine2PBcRDovetail_2522:HG2_PB_SVrefine2PBcRplusDovetail_8690:HG2_PB_SVrefine2PB10Xhap12_3951;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7034:HG2_Ill_250bpfermikitraw_7543:HG2_Ill_GATKHCSBGrefine_3700:HG2_Ill_GATKHC_9006:HG2_Ill_Krunchall_7696:HG2_Ill_SpiralSDKrefine_13187:HG2_Ill_breakscan11_778:HG2_Ill_manta_1532:HG2_Ill_scalpel_5293:HG2_Ill_svaba_6941:HG3_10X_allpass_1090:HG3_Ill_150bpfermikitraw_7107:HG3_Ill_250bpfermikitraw_7290:HG3_Ill_GATKHCSBGrefine_3657:HG3_Ill_GATKHC_9020:HG3_Ill_Krunchall_7571:HG3_Ill_manta_1260:HG3_Ill_scalpel_5392:HG3_Ill_svaba_7060:HG4_10X_allpass_1036:HG4_Ill_150bpfermikitraw_7267:HG4_Ill_250bpfermikitraw_7583:HG4_Ill_GATKHCSBGrefine_3849:HG4_Ill_GATKHC_9083:HG4_Ill_Krunchall_7975:HG4_Ill_manta_1339:HG4_Ill_scalpel_5200:HG4_Ill_svaba_7065;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0625;ClusterMaxSizeDiff=0.0625;ClusterMaxEditDist=0.0787402;PBcalls=11;Illcalls=26;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-64;DistBack=7457;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=5:1206463-1206563;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3047.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:./.:13:7:8:20:./.:0:0:0:0:0/1:21:17:./.:.:.:.:.:.
chr5	1242444	HG2_Ill_SVrefine2DISCOVARplusDovetail_10101	ACGTCCACACGATCCCAACAGGGGCAGGAGGCGTCCACACGATCCCAACAGGGGCAGGAGG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10101:HG2_PB_assemblyticsfalcon_20812:HG4_PB_pbsv_5496:HG4_PB_HySA_8120:HG3_PB_pbsv_5315:HG2_PB_pbsv_5471:HG4_PB_SVrefine2PBcRDovetail_2782:HG4_PB_SVrefine2Falcon1Dovetail_3331:HG4_Ill_SVrefine2DISCOVARDovetail_4070:HG4_Ill_250bpfermikitraw_7585:HG3_Ill_SVrefine2DISCOVARDovetail_4168:HG2_PB_SVrefine2PBcRplusDovetail_8691;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10101:HG4_PB_SVrefine2PBcRDovetail_2782:HG4_PB_SVrefine2Falcon1Dovetail_3331:HG4_Ill_SVrefine2DISCOVARDovetail_4070:HG4_Ill_250bpfermikitraw_7585:HG3_Ill_SVrefine2DISCOVARDovetail_4168:HG2_PB_SVrefine2PBcRplusDovetail_8691;NumExactMatchSVs=7;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.208955;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=-31;DistForward=-60;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=210;REFWIDENED=5:1242445-1242714;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3048.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:./.:23:9:2:22:./.:0:0:0:0:./.:2:2:./.:.:.:.:.:.
chr5	1252444	HG2_Ill_GATKHCSBGrefine_3703	GAGATGAGACTGGGAGATGGTAAGAGGATGACAGATGAGACTGGGAGATAAGAGGAAGAC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3939:HG3_PB_assemblyticsfalcon_20753:HG2_PB_pbsv_5472:HG2_PB_HySA_10107:HG4_PB_pbsv_5497:HG3_PB_pbsv_5316:HG3_PB_HySA_8324:HG4_PB_assemblyticsfalcon_20351:HG4_Ill_svaba_7071:HG4_Ill_manta_1340:HG4_Ill_Krunchall_7977:HG4_Ill_GATKHC_9087:HG4_Ill_GATKHCSBGrefine_3854:HG4_Ill_250bpfermikitraw_7586:HG4_Ill_150bpfermikitraw_7270:HG3_Ill_svaba_7066:HG3_Ill_scalpel_5394:HG3_Ill_manta_1261:HG3_Ill_Krunchall_7572:HG3_Ill_GATKHC_9026:HG3_Ill_GATKHCSBGrefine_3659:HG3_Ill_250bpfermikitraw_7293:HG3_Ill_150bpfermikitraw_7111:HG2_Ill_svaba_6946:HG2_Ill_scalpel_5295:HG2_Ill_manta_1533:HG2_Ill_SpiralSDKrefine_13189:HG2_Ill_Krunchall_7698:HG2_Ill_GATKHC_9009:HG2_Ill_GATKHCSBGrefine_3703:HG2_Ill_250bpfermikitraw_7545:HG4_PB_SVrefine2PBcRDovetail_2783:HG2_PB_SVrefine2Falcon1plusDovetail_9346:HG2_Ill_SVrefine2DISCOVARplusDovetail_10102;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7545:HG2_Ill_GATKHCSBGrefine_3703:HG2_Ill_GATKHC_9009:HG2_Ill_Krunchall_7698:HG2_Ill_SpiralSDKrefine_13189:HG2_Ill_manta_1533:HG2_Ill_scalpel_5295:HG2_Ill_svaba_6946:HG3_Ill_150bpfermikitraw_7111:HG3_Ill_250bpfermikitraw_7293:HG3_Ill_GATKHCSBGrefine_3659:HG3_Ill_GATKHC_9026:HG3_Ill_Krunchall_7572:HG3_Ill_manta_1261:HG3_Ill_scalpel_5394:HG3_Ill_svaba_7066:HG4_Ill_150bpfermikitraw_7270:HG4_Ill_250bpfermikitraw_7586:HG4_Ill_GATKHCSBGrefine_3854:HG4_Ill_GATKHC_9087:HG4_Ill_Krunchall_7977:HG4_Ill_manta_1340:HG4_Ill_svaba_7071:HG4_PB_assemblyticsfalcon_20351;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.178862;PBcalls=9;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-59;DistBack=1411;DistForward=-43;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=5:1252418-1252551;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3049.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:34:0|1:33:8:0:16:./.:0:0:0:0:0/1:17:25:./.:.:.:.:.:.
chr5	1483826	HG2_PB_SVrefine2PB10Xhap12_3961	AAGGAACACTTTCTGTTTTAACATCGCGCACGAGCTGGAAGGCGTCTGTGGAGGGACACTTGCTATTATAACATTGCGCACGAGCTGGAAGACATCCGTGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3946:HG3_PB_assemblyticsfalcon_20778:HG3_PB_SVrefine2Falcon1Dovetail_3398:HG2_PB_pbsv_5487:HG4_PB_pbsv_5509:HG4_Ill_250bpfermikitraw_7593:HG4_10X_allpass_1038:HG4_PB_SVrefine2PBcRDovetail_2785:HG4_PB_SVrefine2Falcon1Dovetail_3341:HG4_Ill_SVrefine2DISCOVARDovetail_4074:HG2_PB_SVrefine2PBcRplusDovetail_8701:HG2_PB_SVrefine2PB10Xhap12_3961:HG2_PB_SVrefine2Falcon1plusDovetail_9358;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3946:HG4_PB_SVrefine2PBcRDovetail_2785:HG4_PB_SVrefine2Falcon1Dovetail_3341:HG4_Ill_SVrefine2DISCOVARDovetail_4074:HG2_PB_SVrefine2PBcRplusDovetail_8701:HG2_PB_SVrefine2PB10Xhap12_3961:HG2_PB_SVrefine2Falcon1plusDovetail_9358;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0201005;ClusterMaxSizeDiff=0.02;ClusterMaxEditDist=0.06;PBcalls=9;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-100;DistBack=0;DistForward=-69;DistMin=-69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=144;REFWIDENED=5:1483827-1484070;PctSeqSimilarity=0.9756;PctSizeSimilarity=1;PctRecOverlap=0.6931;SizeDiff=0;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=88;MatchId=3052.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:36:./.:17:30:10:2:./.:0:0:0:0:0/1:39:7:./.:.:.:.:.:.
chr5	1682463	HG2_Ill_SVrefine2DISCOVARplusDovetail_10107	CAAAAATCATTAAGGCGGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_786:HG4_PB_pbsv_5521:HG3_PB_pbsv_5348:HG4_PB_assemblyticsfalcon_20386:HG3_PB_assemblyticsfalcon_20796:HG2_PB_assemblyticsfalcon_20845:HG2_PB_assemblyticsPBcR_20153:HG2_PB_HySA_10135:HG2_Ill_Spiral_398:HG2_PB_pbsv_5497:HG2_Ill_tnscope_607:HG2_Ill_MetaSV_3874:HG4_PB_SVrefine2PBcRDovetail_2788:HG4_PB_SVrefine2Falcon1Dovetail_3348:HG4_Ill_MetaSV_4044:HG4_Ill_GATKHCSBGrefine_3874:HG4_10X_allpass_1040:HG3_PB_SVrefine2PBcRDovetail_2536:HG3_PB_SVrefine2Falcon1Dovetail_3410:HG3_Ill_manta_1266:HG3_Ill_SVrefine2DISCOVARDovetail_4175:HG3_Ill_MetaSV_4055:HG3_Ill_GATKHCSBGrefine_3667:HG3_10X_allpass_1094:HG2_PB_SVrefine2PBcRplusDovetail_8709:HG2_PB_SVrefine2PB10Xhap12_3972:HG2_PB_SVrefine2Falcon2Bionano_2700:HG2_PB_SVrefine2Falcon1plusDovetail_9366:HG2_Ill_scalpel_5302:HG2_Ill_manta_1539:HG2_Ill_SVrefine2DISCOVARplusDovetail_10107:HG2_Ill_GATKHCSBGrefine_3717:HG2_10X_allpass_882:HG2_10X_SVrefine210Xhap12_3951;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3951:HG2_10X_allpass_882:HG2_Ill_GATKHCSBGrefine_3717:HG2_Ill_SVrefine2DISCOVARplusDovetail_10107:HG2_Ill_manta_1539:HG2_Ill_scalpel_5302:HG2_PB_SVrefine2Falcon1plusDovetail_9366:HG2_PB_SVrefine2Falcon2Bionano_2700:HG2_PB_SVrefine2PB10Xhap12_3972:HG2_PB_SVrefine2PBcRplusDovetail_8709:HG3_10X_allpass_1094:HG3_Ill_GATKHCSBGrefine_3667:HG3_Ill_MetaSV_4055:HG3_Ill_SVrefine2DISCOVARDovetail_4175:HG3_Ill_manta_1266:HG3_PB_SVrefine2Falcon1Dovetail_3410:HG3_PB_SVrefine2PBcRDovetail_2536:HG4_10X_allpass_1040:HG4_Ill_GATKHCSBGrefine_3874:HG4_Ill_MetaSV_4044:HG4_PB_SVrefine2Falcon1Dovetail_3348:HG4_PB_SVrefine2PBcRDovetail_2788;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0747968;ClusterMaxSizeDiff=0.0747968;ClusterMaxEditDist=0.0747968;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=-198;DistForward=6714;DistMin=-198;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=5:1682464-1682787;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3054.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:64:./.:8:23:1:26:./.:0:0:0:0:1/1:0:35:./.:2:4:.:.:.
chr5	1924590	HG2_PB_assemblyticsPBcR_20166	AAGCATTTTTCTTACTAATTAGTCATATCCCTTCCATCTGGAGGGGCGTTTGGGCCAGAACGGCCCAGTATTTAGCCAAATGCCCGTGGTGTGGCCTCCTCACCAGTGAAGCTGTGGCCCACCCGGGAGAATAAGCCAAGGAAAGCTTGAGAAGAGCAGGCACCTCCAAACACCCAAACTCCTCTCATCTTTCTAAAAACCATGCCACATCCTGACGTTTTACATTACGGCTAATCAGCCTTTTTGAAATTCGTGGTTGAGGAGGACAACGTCATCATCAAAGTAAATGGTTTACTTAAATATAGAGTGTTTTGAAAAAGAGTTTTACTATTATCTAGTGAATGCAACTGTGACACCACAGTTAACTGTTGTAAATGTGGCTGCGAATGCTCTGGGTTTGATGGGGGGCTGCCGACAGATACCACGGTTACGGTGAGACGGCTGCTGCCTGCGAACGTCCGTCATGGATGGTTTTCCTCTAAGTGGGCTTCACTGTTTTTCCTTTCCCGTCCAGACTGATAAATAATTGAAGAGCAGCTTGGTGGCATCAGGTTCTTGAGCTGGGGAAACTAATCCAAGAACCAAATTATTGGTTAGACCAGTTCAACAAATG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3982:HG4_10X_allpass_1042:HG2_PB_HySA_10154:HG4_Ill_Krunchall_7998:HG3_Ill_Krunchall_7593:HG4_PB_assemblyticsfalcon_20405:HG4_PB_SVrefine2PBcRDovetail_2796:HG4_PB_SVrefine2Falcon1Dovetail_3357:HG4_Ill_manta_1346:HG4_Ill_MetaSV_4047:HG4_Ill_GATKHCSBGrefine_3885:HG4_Ill_Cortex_2851:HG3_PB_pbsv_5360:HG3_PB_assemblyticsfalcon_20810:HG3_PB_SVrefine2PBcRDovetail_2542:HG3_PB_SVrefine2Falcon1Dovetail_3420:HG3_Ill_manta_1267:HG3_Ill_SVrefine2DISCOVARDovetail_4182:HG3_Ill_MetaSV_4056:HG3_Ill_GATKHCSBGrefine_3669:HG3_Ill_Cortex_2864:HG3_10X_allpass_1095:HG2_PB_pbsv_5507:HG2_PB_assemblyticsfalcon_20857:HG2_PB_assemblyticsPBcR_20166:HG2_PB_SVrefine2PBcRplusDovetail_8718:HG2_PB_SVrefine2PB10Xhap12_3983:HG2_Ill_manta_1540:HG2_Ill_breakscan11_791:HG2_Ill_SpiralSDKrefine_13205:HG2_Ill_MetaSV_3875:HG2_Ill_GATKHCSBGrefine_3721:HG2_Ill_Cortex_6830:HG2_10X_allpass_884:HG2_10X_SVrefine210Xhap12_3958:HG2_Ill_tnscope_608:HG2_Ill_Spiral_399:HG4_PB_pbsv_5532;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3958:HG2_10X_allpass_884:HG2_Ill_Cortex_6830:HG2_Ill_GATKHCSBGrefine_3721:HG2_Ill_MetaSV_3875:HG2_Ill_SpiralSDKrefine_13205:HG2_Ill_breakscan11_791:HG2_Ill_manta_1540:HG2_PB_SVrefine2PB10Xhap12_3983:HG2_PB_SVrefine2PBcRplusDovetail_8718:HG2_PB_assemblyticsPBcR_20166:HG2_PB_assemblyticsfalcon_20857:HG2_PB_pbsv_5507:HG3_10X_allpass_1095:HG3_Ill_Cortex_2864:HG3_Ill_GATKHCSBGrefine_3669:HG3_Ill_MetaSV_4056:HG3_Ill_SVrefine2DISCOVARDovetail_4182:HG3_Ill_manta_1267:HG3_PB_SVrefine2Falcon1Dovetail_3420:HG3_PB_SVrefine2PBcRDovetail_2542:HG3_PB_assemblyticsfalcon_20810:HG3_PB_pbsv_5360:HG4_Ill_Cortex_2851:HG4_Ill_GATKHCSBGrefine_3885:HG4_Ill_MetaSV_4047:HG4_Ill_manta_1346:HG4_PB_SVrefine2Falcon1Dovetail_3357:HG4_PB_SVrefine2PBcRDovetail_2796:HG4_PB_assemblyticsfalcon_20405;NumExactMatchSVs=30;ClusterMaxShiftDist=0.110774;ClusterMaxSizeDiff=0.110774;ClusterMaxEditDist=0.118451;PBcalls=15;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-612;DistBack=45;DistForward=-612;DistMin=-612;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:1924591-1925203;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3055.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:21:39:0|1:19:0:1:34:./.:0:0:0:0:0/1:61:18:./.:56:7:.:.:1
chr5	1941144	HG2_Ill_SVrefine2DISCOVARplusDovetail_10116	TGGAAAAATTTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCACTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCCTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_400:HG4_Ill_Krunchall_7999:HG2_Ill_Krunchall_7718:HG3_Ill_Krunchall_7594:HG2_Ill_Krunchall_7717:HG2_PB_assemblyticsfalcon_20860:HG2_PB_assemblyticsPBcR_20168:HG2_PB_pbsv_5509:HG2_PB_HySA_10157:HG2_PB_HySA_10156:HG4_PB_pbsv_5533:HG4_PB_HySA_8160:HG3_Ill_MetaSV_4057:HG2_Ill_tnscope_609:HG2_Ill_MetaSV_3876:HG4_PB_SVrefine2PBcRDovetail_2797:HG4_Ill_scalpel_5216:HG4_Ill_manta_1347:HG4_Ill_SVrefine2DISCOVARDovetail_4084:HG4_Ill_MetaSV_4048:HG4_Ill_GATKHCSBGrefine_3886:HG4_10X_allpass_1043:HG3_PB_pbsv_5362:HG3_PB_SVrefine2PBcRDovetail_2543:HG3_Ill_scalpel_5409:HG3_Ill_manta_1268:HG3_Ill_SVrefine2DISCOVARDovetail_4183:HG3_Ill_GATKHCSBGrefine_3670:HG2_PB_SVrefine2PBcRplusDovetail_8719:HG2_PB_SVrefine2PB10Xhap12_3984:HG2_PB_SVrefine2Falcon2Bionano_2709:HG2_PB_SVrefine2Falcon1plusDovetail_9374:HG2_Ill_scalpel_5311:HG2_Ill_manta_1541:HG2_Ill_SVrefine2DISCOVARplusDovetail_10116:HG2_Ill_GATKHCSBGrefine_3723:HG2_10X_allpass_885:HG2_10X_SVrefine210Xhap12_3960:HG2_Ill_breakscan11_792:HG4_Ill_Spiral_447:HG3_Ill_Spiral_5960;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3960:HG2_10X_allpass_885:HG2_Ill_GATKHCSBGrefine_3723:HG2_Ill_SVrefine2DISCOVARplusDovetail_10116:HG2_Ill_manta_1541:HG2_Ill_scalpel_5311:HG2_PB_SVrefine2Falcon1plusDovetail_9374:HG2_PB_SVrefine2Falcon2Bionano_2709:HG2_PB_SVrefine2PB10Xhap12_3984:HG2_PB_SVrefine2PBcRplusDovetail_8719:HG3_Ill_GATKHCSBGrefine_3670:HG3_Ill_SVrefine2DISCOVARDovetail_4183:HG3_Ill_manta_1268:HG3_Ill_scalpel_5409:HG3_PB_SVrefine2PBcRDovetail_2543:HG3_PB_pbsv_5362:HG4_10X_allpass_1043:HG4_Ill_GATKHCSBGrefine_3886:HG4_Ill_MetaSV_4048:HG4_Ill_SVrefine2DISCOVARDovetail_4084:HG4_Ill_manta_1347:HG4_Ill_scalpel_5216:HG4_PB_SVrefine2PBcRDovetail_2797;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0752864;ClusterMaxSizeDiff=0.0752864;ClusterMaxEditDist=0.0752864;PBcalls=14;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=1665;DistForward=-298;DistMin=-298;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=5:1941145-1941466;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3056.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:57:1/1:5:26:0:29:./.:0:0:0:0:1/1:0:55:0/1:2:13:.:.:.
chr5	1950902	HG3_PB_SVrefine2Falcon1Dovetail_3422	GTGCTGAGCGCGAGTCGTCCGCTGTGTGTGCATCATCTGCTGTGCGTGTGTCATCTGCTGTGCATGCCTGCGTCATCTGCTGTGTATGTGTCATCTGTTGTGCATGCGTGTGTCGTCTGCTGTGGGCGCGTGAGTCATCTGCTCTGTGTGCTTGTGCCGTCTGCTGTGCCTGCGTCATCGTCTGCTGTGCGTGTGTCATCTGTGCGTGTGTCATCTGCTGTGCGTGAGTCATCTGCTGTGCGTGTGTCATCTGTGCGTGTGTCATCTGCTGTGCGTGCGTGTGCCCTCTACTGTGGGTGTGTTCATCATCTGCTGTGCGTGCGTTGTCTGCTGTGCGTGCGCCGTCTGCTGTGCGTGCGCCGTCTGCTGTGCGTGCGTCGCCTGCTGTGCGAGTCGTCTGCTGTGCGTGCGTCGTCTGCTGTGCGTGAGTCGTCTGCTGTGCGTGCGCCGTC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3961:HG3_10X_allpass_1096:HG2_10X_allpass_886:HG2_PB_pbsv_5510:HG3_Ill_MetaSV_4058:HG3_Ill_manta_1269:HG3_Ill_GATKHCSBGrefine_3671:HG2_Ill_SpiralSDKrefine_13208:HG2_Ill_GATKHCSBGrefine_3724:HG2_Ill_tnscope_610:HG3_PB_pbsv_5363:HG3_PB_SVrefine2PBcRDovetail_2544:HG3_PB_SVrefine2Falcon1Dovetail_3422:HG3_Ill_SVrefine2DISCOVARDovetail_4184:HG2_PB_SVrefine2PB10Xhap12_3985:HG2_PB_SVrefine2Falcon1plusDovetail_9375:HG2_Ill_SVrefine2DISCOVARplusDovetail_10117;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3961:HG3_PB_SVrefine2PBcRDovetail_2544:HG3_PB_SVrefine2Falcon1Dovetail_3422:HG3_Ill_SVrefine2DISCOVARDovetail_4184:HG2_PB_SVrefine2PB10Xhap12_3985:HG2_PB_SVrefine2Falcon1plusDovetail_9375:HG2_Ill_SVrefine2DISCOVARplusDovetail_10117;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0829493;ClusterMaxSizeDiff=0.0829493;ClusterMaxEditDist=0.110599;PBcalls=6;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-451;DistBack=1708;DistForward=-363;DistMin=-363;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=398;REFWIDENED=5:1950903-1951751;PctSeqSimilarity=0.8692;PctSizeSimilarity=0.9823;PctRecOverlap=0.7566;SizeDiff=8;StartDistance=-110;EndDistance=-102;GTMatch=0;TruScore=86;MatchId=3057.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:36:0|1:30:3:2:25:./.:0:0:0:0:./.:27:3:0/0:67:2:.:.:.
chr5	2025558	HG2_Ill_150bpfermikitraw_7060	CGCTTCCCTCAGCTAGGAGGAGATGGTTTTTTAAAGGCTTGCTGAAGGGCGGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3966:HG3_PB_HySA_8384:HG3_PB_pbsv_5364:HG3_Ill_svaba_7096:HG3_Ill_manta_1270:HG3_Ill_Krunchall_7596:HG3_Ill_GATKHC_9057:HG3_Ill_GATKHCSBGrefine_3672:HG3_Ill_250bpfermikitraw_7315:HG3_Ill_150bpfermikitraw_7133:HG2_PB_pbsv_5511:HG2_PB_assemblyticsfalcon_20863:HG2_Ill_svaba_6978:HG2_Ill_manta_1542:HG2_Ill_SpiralSDKrefine_13209:HG2_Ill_Krunchall_7720:HG2_Ill_GATKHC_9042:HG2_Ill_GATKHCSBGrefine_3725:HG2_Ill_250bpfermikitraw_7573:HG2_Ill_150bpfermikitraw_7060:HG3_Ill_SVrefine2DISCOVARDovetail_4186:HG2_PB_SVrefine2PBcRplusDovetail_8720:HG2_PB_SVrefine2PB10Xhap12_3986:HG2_Ill_SVrefine2DISCOVARplusDovetail_10119;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7060:HG2_Ill_250bpfermikitraw_7573:HG2_Ill_GATKHCSBGrefine_3725:HG2_Ill_GATKHC_9042:HG2_Ill_Krunchall_7720:HG2_Ill_SpiralSDKrefine_13209:HG2_Ill_manta_1542:HG2_Ill_svaba_6978:HG2_PB_assemblyticsfalcon_20863:HG2_PB_pbsv_5511:HG3_Ill_150bpfermikitraw_7133:HG3_Ill_250bpfermikitraw_7315:HG3_Ill_GATKHCSBGrefine_3672:HG3_Ill_GATKHC_9057:HG3_Ill_Krunchall_7596:HG3_Ill_manta_1270:HG3_Ill_svaba_7096;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0952381;PBcalls=6;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-52;DistBack=23;DistForward=1964;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=55;REFWIDENED=5:2025536-2025642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3058.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:36:0|1:28:5:2:26:./.:0:0:0:0:0/1:19:21:./.:.:.:.:.:.
chr5	2769424	HG2_PB_PB10Xdip_23699	AAGAATTTGTATCATGAGTGGAGGGCTGCACTTTTTCTGGAAATTATTTTTCCACACCTATTAAGATAAACATTTTTTTTTATTTACTTCTATTATTATAATATGGTGTGCTACATTAATTGATCTTCAAATGTTAAGCCAACCTTGAATTTGAGATGAATACCACTTAGGGTTAAATTATCATTTACCAGACATTAATATCTCTCATGAACATAGAA	A	20	PASS	ClusterIDs=HG4_PB_pbsv_5547:HG4_Ill_Krunchall_8020:HG2_Ill_Krunchall_7740:HG2_PB_SVrefine2PB10Xhap12_3999:HG4_Ill_Krunchall_8019:HG2_Ill_Krunchall_7739:HG2_PB_assemblyticsfalcon_20885:HG4_Ill_Spiral_449:HG2_PB_PB10Xdip_23700:HG2_PB_PB10Xdip_23699:HG4_PB_HySA_8181:HG4_Ill_MetaSV_4052:HG4_PB_SVrefine2PBcRDovetail_2804:HG4_Ill_svaba_7132:HG4_Ill_scalpel_5229:HG4_Ill_manta_1351:HG4_Ill_SVrefine2DISCOVARDovetail_4094:HG4_Ill_GATKHCSBGrefine_3894:HG4_Ill_Cortex_2853:HG4_10X_allpass_1045:HG2_PB_pbsv_5525:HG2_PB_SVrefine2PB10Xhap12_3998:HG2_PB_SVrefine2Falcon2Bionano_2716:HG2_PB_SVrefine2Falcon1plusDovetail_9382:HG2_PB_HySA_10186:HG2_Ill_svaba_7002:HG2_Ill_manta_1545:HG2_Ill_breakscan11_794:HG2_Ill_SpiralSDKrefine_13224:HG2_Ill_SVrefine2DISCOVARplusDovetail_10128:HG2_Ill_MetaSV_3880:HG2_Ill_GATKHCSBGrefine_3734:HG2_Ill_Cortex_6836:HG2_10X_allpass_888:HG2_10X_SVrefine210Xhap12_3975;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3975:HG2_10X_allpass_888:HG2_Ill_Cortex_6836:HG2_Ill_GATKHCSBGrefine_3734:HG2_Ill_MetaSV_3880:HG2_Ill_SVrefine2DISCOVARplusDovetail_10128:HG2_Ill_SpiralSDKrefine_13224:HG2_Ill_breakscan11_794:HG2_Ill_manta_1545:HG2_Ill_svaba_7002:HG2_PB_HySA_10186:HG2_PB_PB10Xdip_23699:HG4_PB_SVrefine2PBcRDovetail_2804:HG4_Ill_svaba_7132:HG4_Ill_scalpel_5229:HG4_Ill_manta_1351:HG4_Ill_SVrefine2DISCOVARDovetail_4094:HG4_Ill_GATKHCSBGrefine_3894:HG4_Ill_Cortex_2853:HG4_10X_allpass_1045:HG2_PB_pbsv_5525:HG2_PB_SVrefine2PB10Xhap12_3998:HG2_PB_SVrefine2Falcon2Bionano_2716:HG2_PB_SVrefine2Falcon1plusDovetail_9382;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0863636;ClusterMaxSizeDiff=0.0863636;ClusterMaxEditDist=0.0863636;PBcalls=12;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=0;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-217;DistBack=182;DistForward=-215;DistMin=-215;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=5:2769424-2769645;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=0.9954;SizeDiff=0;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3059.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:40:0|1:34:2:5:36:./.:0:0:0:0:0/1:51:20:./.:.:.:.:.:.
chr5	2784739	HG2_PB_SVrefine2PB10Xhap12_4000	CTACAGGTGCACATGCACACAGGCCTTGTATGTCTACAGGTGCACACACATATGCACACAGGCCTTGTATGTCTACAGGTGCACATGCATTTAGGCCTTGAATGTT	C	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_3735:HG4_PB_SVrefine2PBcRDovetail_2805:HG4_Ill_SVrefine2DISCOVARDovetail_4095:HG3_PB_assemblyticsfalcon_20828:HG3_PB_SVrefine2PBcRDovetail_2548:HG3_PB_SVrefine2Falcon1Dovetail_3430:HG2_PB_assemblyticsfalcon_20887:HG2_PB_assemblyticsPBcR_20187:HG2_PB_SVrefine2PBcRplusDovetail_8730:HG2_PB_SVrefine2PB10Xhap12_4000:HG2_PB_SVrefine2Falcon2Bionano_2717:HG2_PB_SVrefine2Falcon1plusDovetail_9383:HG2_Ill_SVrefine2DISCOVARplusDovetail_10129:HG2_10X_SVrefine210Xhap12_3976:HG4_PB_HySA_8183:HG3_PB_pbsv_5375:HG2_PB_HySA_10188:HG2_Ill_GATKHC_9067:HG2_Ill_GATKHCSBGrefine_3736:HG4_PB_pbsv_5548:HG2_PB_pbsv_5526:HG4_Ill_GATKHCSBGrefine_3895:HG4_Ill_250bpfermikitraw_7637:HG4_Ill_150bpfermikitraw_7319;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3976:HG2_Ill_SVrefine2DISCOVARplusDovetail_10129:HG2_PB_SVrefine2Falcon1plusDovetail_9383:HG2_PB_SVrefine2Falcon2Bionano_2717:HG2_PB_SVrefine2PB10Xhap12_4000:HG2_PB_SVrefine2PBcRplusDovetail_8730:HG2_PB_assemblyticsPBcR_20187:HG2_PB_assemblyticsfalcon_20887:HG3_PB_SVrefine2Falcon1Dovetail_3430:HG3_PB_SVrefine2PBcRDovetail_2548:HG3_PB_assemblyticsfalcon_20828:HG4_Ill_SVrefine2DISCOVARDovetail_4095:HG4_PB_SVrefine2PBcRDovetail_2805;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0639269;ClusterMaxSizeDiff=0.0639269;ClusterMaxEditDist=0.129032;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-105;DistBack=7223;DistForward=11455;DistMin=7223;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=457;REFWIDENED=5:2784295-2784856;PctSeqSimilarity=0.9155;PctSizeSimilarity=0.9459;PctRecOverlap=0.3482;SizeDiff=-6;StartDistance=73;EndDistance=67;GTMatch=0;TruScore=73;MatchId=3060.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:56:1/1:1:32:4:23:./.:0:0:0:0:0/0:41:0:./.:.:.:.:.:.
chr5	3015548	HG2_Ill_manta_1547	TTTATTTCTCTTGGATAAATACTTAGAAATTTAATTGTTGAATTATTTCTCTTGGATAAATACTTAGAAATTTAATTGTTGAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_403:HG3_PB_HySA_8414:HG4_PB_pbsv_5551:HG2_PB_pbsv_5529:HG3_PB_pbsv_5378:HG4_PB_assemblyticsfalcon_20430:HG4_Ill_svaba_7140:HG4_Ill_Krunchall_8027:HG4_Ill_GATKHC_9165:HG4_Ill_GATKHCSBGrefine_3898:HG4_Ill_250bpfermikitraw_7644:HG4_Ill_150bpfermikitraw_7325:HG4_10X_allpass_1046:HG3_PB_assemblyticsfalcon_20835:HG3_Ill_svaba_7122:HG3_Ill_Krunchall_7612:HG3_Ill_GATKHC_9085:HG3_Ill_GATKHCSBGrefine_3680:HG3_Ill_250bpfermikitraw_7333:HG3_Ill_150bpfermikitraw_7151:HG3_10X_allpass_1098:HG2_PB_assemblyticsfalcon_20894:HG2_PB_assemblyticsPBcR_20194:HG2_Ill_svaba_7011:HG2_Ill_scalpel_5334:HG2_Ill_manta_1547:HG2_Ill_SpiralSDKrefine_13231:HG2_Ill_Krunchall_7748:HG2_Ill_GATKHC_9078:HG2_Ill_GATKHCSBGrefine_3739:HG2_Ill_250bpfermikitraw_7598:HG2_Ill_150bpfermikitraw_7087:HG4_PB_HySA_8189:HG4_Ill_Spiral_450:HG2_PB_HySA_10196;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7087:HG2_Ill_250bpfermikitraw_7598:HG2_Ill_GATKHCSBGrefine_3739:HG2_Ill_GATKHC_9078:HG2_Ill_Krunchall_7748:HG2_Ill_SpiralSDKrefine_13231:HG2_Ill_manta_1547:HG2_Ill_scalpel_5334:HG2_Ill_svaba_7011:HG2_PB_assemblyticsPBcR_20194:HG2_PB_assemblyticsfalcon_20894:HG3_10X_allpass_1098:HG3_Ill_150bpfermikitraw_7151:HG3_Ill_250bpfermikitraw_7333:HG3_Ill_GATKHCSBGrefine_3680:HG3_Ill_GATKHC_9085:HG3_Ill_Krunchall_7612:HG3_Ill_svaba_7122:HG3_PB_assemblyticsfalcon_20835:HG4_10X_allpass_1046:HG4_Ill_150bpfermikitraw_7325:HG4_Ill_250bpfermikitraw_7644:HG4_Ill_GATKHCSBGrefine_3898:HG4_Ill_GATKHC_9165:HG4_Ill_Krunchall_8027:HG4_Ill_svaba_7140:HG4_PB_assemblyticsfalcon_20430;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.0243902;PBcalls=10;Illcalls=23;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=21;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-82;DistBack=487;DistForward=20917;DistMin=487;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=45;REFWIDENED=5:3015549-3015675;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3061.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:73:1/1:2:23:3:37:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr5	3141443	HG2_Ill_GATKHC_9080	AAAAAAAAAGAAAGTTTATGACACGTCATTTGCAAGACTTAAAATCTGGCTAGCCTGTTAGAACATTTTCAGAAGTTCTAATGAGTGCTTTGCAACTGTTT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_404:HG4_PB_pbsv_5553:HG3_PB_pbsv_5379:HG2_PB_pbsv_5530:HG4_PB_HySA_8191:HG4_Ill_svaba_7144:HG4_Ill_scalpel_5235:HG4_Ill_SVrefine2DISCOVARDovetail_4097:HG4_Ill_MetaSV_4054:HG4_Ill_Krunchall_8031:HG4_Ill_GATKHC_9169:HG4_Ill_GATKHCSBGrefine_3901:HG4_Ill_250bpfermikitraw_7646:HG4_Ill_150bpfermikitraw_7327:HG4_CG_vcfBeta_3573:HG4_10X_allpass_1048:HG3_PB_assemblyticsfalcon_20836:HG3_PB_SVrefine2PBcRDovetail_2550:HG3_PB_SVrefine2Falcon1Dovetail_3432:HG3_Ill_svaba_7125:HG3_Ill_scalpel_5425:HG3_Ill_manta_1272:HG3_Ill_SVrefine2DISCOVARDovetail_4193:HG3_Ill_MetaSV_4063:HG3_Ill_GATKHC_9088:HG3_Ill_GATKHCSBGrefine_3681:HG3_Ill_250bpfermikitraw_7336:HG3_Ill_150bpfermikitraw_7154:HG3_10X_allpass_1099:HG2_PB_assemblyticsfalcon_20895:HG2_PB_assemblyticsPBcR_20197:HG2_PB_SVrefine2PBcRplusDovetail_8732:HG2_PB_SVrefine2PB10Xhap12_4002:HG2_PB_SVrefine2Falcon2Bionano_2719:HG2_PB_SVrefine2Falcon1plusDovetail_9385:HG2_Ill_svaba_7013:HG2_Ill_scalpel_5335:HG2_Ill_manta_1548:HG2_Ill_SVrefine2DISCOVARplusDovetail_10132:HG2_Ill_MetaSV_3882:HG2_Ill_Krunchall_7750:HG2_Ill_GATKHC_9080:HG2_Ill_GATKHCSBGrefine_3740:HG2_Ill_150bpfermikitraw_7089:HG2_CG_vcfBeta_3185:HG2_10X_allpass_889:HG2_10X_SVrefine210Xhap12_3979:HG3_PB_HySA_8416:HG2_PB_HySA_10197;NumClusterSVs=49;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3979:HG2_10X_allpass_889:HG2_CG_vcfBeta_3185:HG2_Ill_150bpfermikitraw_7089:HG2_Ill_GATKHCSBGrefine_3740:HG2_Ill_GATKHC_9080:HG2_Ill_Krunchall_7750:HG2_Ill_MetaSV_3882:HG2_Ill_SVrefine2DISCOVARplusDovetail_10132:HG2_Ill_manta_1548:HG2_Ill_scalpel_5335:HG2_Ill_svaba_7013:HG2_PB_SVrefine2Falcon1plusDovetail_9385:HG2_PB_SVrefine2Falcon2Bionano_2719:HG2_PB_SVrefine2PB10Xhap12_4002:HG2_PB_SVrefine2PBcRplusDovetail_8732:HG2_PB_assemblyticsPBcR_20197:HG2_PB_assemblyticsfalcon_20895:HG3_10X_allpass_1099:HG3_Ill_150bpfermikitraw_7154:HG3_Ill_250bpfermikitraw_7336:HG3_Ill_GATKHCSBGrefine_3681:HG3_Ill_GATKHC_9088:HG3_Ill_MetaSV_4063:HG3_Ill_SVrefine2DISCOVARDovetail_4193:HG3_Ill_manta_1272:HG3_Ill_scalpel_5425:HG3_Ill_svaba_7125:HG3_PB_SVrefine2Falcon1Dovetail_3432:HG3_PB_SVrefine2PBcRDovetail_2550:HG3_PB_assemblyticsfalcon_20836:HG4_10X_allpass_1048:HG4_CG_vcfBeta_3573:HG4_Ill_150bpfermikitraw_7327:HG4_Ill_250bpfermikitraw_7646:HG4_Ill_GATKHCSBGrefine_3901:HG4_Ill_GATKHC_9169:HG4_Ill_Krunchall_8031:HG4_Ill_MetaSV_4054:HG4_Ill_SVrefine2DISCOVARDovetail_4097:HG4_Ill_scalpel_5235:HG4_Ill_svaba_7144;NumExactMatchSVs=42;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0816327;ClusterMaxEditDist=0.0816327;PBcalls=15;Illcalls=28;TenXcalls=4;CGcalls=2;PBexactcalls=9;Illexactcalls=27;TenXexactcalls=4;CGexactcalls=2;HG2count=21;HG3count=15;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-100;DistBack=16452;DistForward=33092;DistMin=16452;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:3141444-3141545;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3062.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:1/1:0:34:1:32:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr5	3202608	HG3_Ill_GATKHCSBGrefine_3682	CCTGCAGCCTGTCACCTCTTCCTCCACCTTCTCCAGCAATGAGGTCCTCTCGGAGAGCCCTGCA	C	20	PASS	ClusterIDs=HG2_Ill_GATKHC_9082:HG2_PB_pbsv_5531:HG3_PB_pbsv_5380:HG3_Ill_GATKHC_9090:HG3_Ill_GATKHCSBGrefine_3682:HG2_PB_assemblyticsPBcR_20199;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHC_9082:HG3_Ill_GATKHC_9090:HG3_Ill_GATKHCSBGrefine_3682:HG2_PB_assemblyticsPBcR_20199;NumExactMatchSVs=4;ClusterMaxShiftDist=0.015625;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.046875;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-63;DistBack=-51;DistForward=-62;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=387;REFWIDENED=5:3202322-3202771;PctSeqSimilarity=0.985;PctSizeSimilarity=0.9844;PctRecOverlap=0.7385;SizeDiff=-1;StartDistance=-16;EndDistance=-17;GTMatch=0;TruScore=90;MatchId=3063.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:34:1|0:3:32:31:1:./.:0:0:0:0:0/1:5:10:./.:.:.:.:.:.
chr5	3499261	HG4_Ill_scalpel_5242	TAAAAGCAGACATGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCAGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGCCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_796:HG2_10X_allpass_890:HG3_10X_allpass_1100:HG4_10X_allpass_1049:HG2_Ill_Krunchall_7760:HG4_PB_pbsv_5562:HG4_PB_HySA_8207:HG4_Ill_MetaSV_4055:HG3_PB_pbsv_5386:HG3_PB_HySA_8436:HG2_PB_HySA_10217:HG2_Ill_tnscope_612:HG2_Ill_MetaSV_3883:HG4_PB_SVrefine2PBcRDovetail_2808:HG4_PB_SVrefine2Falcon1Dovetail_3369:HG4_Ill_scalpel_5242:HG4_Ill_manta_1353:HG4_Ill_SVrefine2DISCOVARDovetail_4100:HG4_Ill_GATKHCSBGrefine_3902:HG3_PB_SVrefine2Falcon1Dovetail_3438:HG3_Ill_manta_1273:HG3_Ill_MetaSV_4064:HG3_Ill_GATKHCSBGrefine_3683:HG2_PB_pbsv_5539:HG2_PB_SVrefine2PBcRplusDovetail_8737:HG2_PB_SVrefine2PB10Xhap12_4009:HG2_PB_SVrefine2Falcon1plusDovetail_9392:HG2_Ill_manta_1549:HG2_Ill_GATKHCSBGrefine_3741:HG2_10X_SVrefine210Xhap12_3982;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3982:HG2_Ill_GATKHCSBGrefine_3741:HG2_Ill_manta_1549:HG2_PB_SVrefine2Falcon1plusDovetail_9392:HG2_PB_SVrefine2PB10Xhap12_4009:HG2_PB_SVrefine2PBcRplusDovetail_8737:HG2_PB_pbsv_5539:HG3_Ill_GATKHCSBGrefine_3683:HG3_Ill_MetaSV_4064:HG3_Ill_manta_1273:HG3_PB_SVrefine2Falcon1Dovetail_3438:HG4_Ill_GATKHCSBGrefine_3902:HG4_Ill_SVrefine2DISCOVARDovetail_4100:HG4_Ill_manta_1353:HG4_Ill_scalpel_5242:HG4_PB_SVrefine2Falcon1Dovetail_3369:HG4_PB_SVrefine2PBcRDovetail_2808;NumExactMatchSVs=17;ClusterMaxShiftDist=0.137405;ClusterMaxSizeDiff=0.137405;ClusterMaxEditDist=0.137405;PBcalls=12;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=5956;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=5:3499262-3499594;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3064.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:31:0|1:37:1:1:26:./.:0:0:0:0:0/1:25:30:0/1:26:10:.:.:.
chr5	3502313	HG4_PB_SVrefine2Falcon1Dovetail_3370	ACAAAATTTATTTTTTTTTTTTTTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3983:HG3_Ill_MetaSV_4066:HG4_Ill_Krunchall_8039:HG3_Ill_Krunchall_7623:HG2_Ill_Krunchall_7761:HG4_Ill_Spiral_452:HG2_Ill_Spiral_405:HG2_PB_PB10Xdip_23956:HG4_PB_HySA_8208:HG3_PB_pbsv_5387:HG4_Ill_MetaSV_4056:HG3_Ill_MetaSV_4065:HG2_Ill_tnscope_613:HG4_PB_pbsv_5563:HG4_PB_SVrefine2PBcRDovetail_2809:HG4_PB_SVrefine2Falcon1Dovetail_3370:HG4_Ill_scalpel_5243:HG4_Ill_SVrefine2DISCOVARDovetail_4101:HG4_Ill_GATKHCSBGrefine_3903:HG4_10X_allpass_1050:HG3_PB_SVrefine2Falcon1Dovetail_3439:HG3_Ill_scalpel_5431:HG3_Ill_manta_1274:HG3_Ill_GATKHCSBGrefine_3684:HG3_10X_allpass_1101:HG2_PB_pbsv_5540:HG2_PB_SVrefine2PBcRplusDovetail_8738:HG2_PB_SVrefine2PB10Xhap12_4010:HG2_PB_SVrefine2Falcon1plusDovetail_9393:HG2_PB_HySA_10218:HG2_Ill_scalpel_5342:HG2_Ill_manta_1550:HG2_Ill_breakscan11_797:HG2_Ill_SpiralSDKrefine_13238:HG2_Ill_MetaSV_3884:HG2_Ill_GATKHCSBGrefine_3742:HG2_10X_allpass_891;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3983:HG2_PB_PB10Xdip_23956:HG4_PB_pbsv_5563:HG4_PB_SVrefine2PBcRDovetail_2809:HG4_PB_SVrefine2Falcon1Dovetail_3370:HG4_Ill_scalpel_5243:HG4_Ill_SVrefine2DISCOVARDovetail_4101:HG4_Ill_GATKHCSBGrefine_3903:HG4_10X_allpass_1050:HG3_PB_SVrefine2Falcon1Dovetail_3439:HG3_Ill_scalpel_5431:HG3_Ill_manta_1274:HG3_Ill_GATKHCSBGrefine_3684:HG3_10X_allpass_1101:HG2_PB_pbsv_5540:HG2_PB_SVrefine2PBcRplusDovetail_8738:HG2_PB_SVrefine2PB10Xhap12_4010:HG2_PB_SVrefine2Falcon1plusDovetail_9393:HG2_PB_HySA_10218:HG2_Ill_scalpel_5342:HG2_Ill_manta_1550:HG2_Ill_breakscan11_797:HG2_Ill_SpiralSDKrefine_13238:HG2_Ill_MetaSV_3884:HG2_Ill_GATKHCSBGrefine_3742:HG2_10X_allpass_891;NumExactMatchSVs=26;ClusterMaxShiftDist=0.00607903;ClusterMaxSizeDiff=0.00607903;ClusterMaxEditDist=0.00911854;PBcalls=12;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-6613;DistForward=-324;DistMin=-6613;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:3502314-3502655;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3065.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:28:0|1:34:0:2:26:./.:0:0:0:0:0/1:29:12:0/1:28:7:.:.:.
chr5	4459411	HG2_Ill_GATKHC_9108	TATCATATGTATATGATATATATACATACATATATATCATATGTATATGATATATATACATACATATATATC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3989:HG2_PB_pbsv_5550:HG3_PB_HySA_8454:HG2_PB_HySA_10237:HG4_Ill_svaba_7156:HG4_Ill_scalpel_5251:HG4_Ill_manta_1355:HG4_Ill_Krunchall_8049:HG4_Ill_GATKHC_9195:HG4_Ill_GATKHCSBGrefine_3909:HG4_Ill_250bpfermikitraw_7669:HG4_Ill_150bpfermikitraw_7345:HG3_Ill_svaba_7137:HG3_Ill_scalpel_5445:HG3_Ill_manta_1278:HG3_Ill_Krunchall_7632:HG3_Ill_GATKHC_9113:HG3_Ill_GATKHCSBGrefine_3690:HG3_Ill_250bpfermikitraw_7354:HG3_Ill_150bpfermikitraw_7173:HG2_Ill_svaba_7027:HG2_Ill_scalpel_5351:HG2_Ill_manta_1556:HG2_Ill_SpiralSDKrefine_13247:HG2_Ill_Krunchall_7774:HG2_Ill_GATKHC_9108:HG2_Ill_GATKHCSBGrefine_3751:HG2_Ill_250bpfermikitraw_7623:HG2_Ill_150bpfermikitraw_7110:HG3_PB_pbsv_5396:HG4_PB_pbsv_5578:HG4_PB_SVrefine2PBcRDovetail_2816:HG4_PB_SVrefine2Falcon1Dovetail_3377:HG4_Ill_SVrefine2DISCOVARDovetail_4105:HG3_PB_SVrefine2PBcRDovetail_2556:HG3_PB_SVrefine2Falcon1Dovetail_3446:HG3_Ill_SVrefine2DISCOVARDovetail_4197:HG2_PB_SVrefine2PBcRplusDovetail_8745:HG2_PB_SVrefine2PB10Xhap12_4020:HG2_PB_SVrefine2Falcon2Bionano_2729:HG2_PB_SVrefine2Falcon1plusDovetail_9399:HG2_Ill_SVrefine2DISCOVARplusDovetail_10138;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7110:HG2_Ill_250bpfermikitraw_7623:HG2_Ill_GATKHCSBGrefine_3751:HG2_Ill_GATKHC_9108:HG2_Ill_Krunchall_7774:HG2_Ill_SpiralSDKrefine_13247:HG2_Ill_manta_1556:HG2_Ill_scalpel_5351:HG2_Ill_svaba_7027:HG3_Ill_150bpfermikitraw_7173:HG3_Ill_250bpfermikitraw_7354:HG3_Ill_GATKHCSBGrefine_3690:HG3_Ill_GATKHC_9113:HG3_Ill_Krunchall_7632:HG3_Ill_manta_1278:HG3_Ill_scalpel_5445:HG3_Ill_svaba_7137:HG4_Ill_150bpfermikitraw_7345:HG4_Ill_250bpfermikitraw_7669:HG4_Ill_GATKHCSBGrefine_3909:HG4_Ill_GATKHC_9195:HG4_Ill_Krunchall_8049:HG4_Ill_manta_1355:HG4_Ill_scalpel_5251:HG4_Ill_svaba_7156;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0559441;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.0699301;PBcalls=13;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=-71;DistBack=96045;DistForward=-32;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=57;REFWIDENED=5:4459393-4459520;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3066.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:18:0:18:./.:0:0:0:0:1/1:0:45:./.:.:.:.:.:.
chr5	6180834	HG4_Ill_scalpel_5268	GCATCCTGAGGGAGGTGTGACCCTCCTCTCCCTCTCTCCTATAGTGCTCCCCTCCTCCCCTC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7128:HG2_PB_HySA_10260:HG2_PB_assemblyticsfalcon_20937:HG2_PB_assemblyticsPBcR_20240:HG4_PB_pbsv_5591:HG2_PB_pbsv_5561:HG3_PB_pbsv_5405:HG4_PB_assemblyticsfalcon_20472:HG4_Ill_svaba_7171:HG4_Ill_scalpel_5268:HG4_Ill_manta_1363:HG4_Ill_Krunchall_8066:HG4_Ill_GATKHC_9211:HG4_Ill_GATKHCSBGrefine_3914:HG4_Ill_250bpfermikitraw_7690:HG4_Ill_150bpfermikitraw_7362:HG3_PB_assemblyticsfalcon_20877:HG3_Ill_svaba_7145:HG3_Ill_scalpel_5452:HG3_Ill_GATKHC_9120:HG3_Ill_GATKHCSBGrefine_3696:HG3_Ill_250bpfermikitraw_7365:HG3_Ill_150bpfermikitraw_7182:HG2_Ill_svaba_7039:HG2_Ill_scalpel_5363:HG2_Ill_manta_1564:HG2_Ill_breakscan11_801:HG2_Ill_SpiralSDKrefine_13255:HG2_Ill_Krunchall_7788:HG2_Ill_GATKHC_9121:HG2_Ill_GATKHCSBGrefine_3757:HG2_Ill_250bpfermikitraw_7640;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7128:HG4_PB_assemblyticsfalcon_20472:HG4_Ill_svaba_7171:HG4_Ill_scalpel_5268:HG4_Ill_manta_1363:HG4_Ill_Krunchall_8066:HG4_Ill_GATKHC_9211:HG4_Ill_GATKHCSBGrefine_3914:HG4_Ill_250bpfermikitraw_7690:HG4_Ill_150bpfermikitraw_7362:HG3_PB_assemblyticsfalcon_20877:HG3_Ill_svaba_7145:HG3_Ill_scalpel_5452:HG3_Ill_GATKHC_9120:HG3_Ill_GATKHCSBGrefine_3696:HG3_Ill_250bpfermikitraw_7365:HG3_Ill_150bpfermikitraw_7182:HG2_Ill_svaba_7039:HG2_Ill_scalpel_5363:HG2_Ill_manta_1564:HG2_Ill_breakscan11_801:HG2_Ill_SpiralSDKrefine_13255:HG2_Ill_Krunchall_7788:HG2_Ill_GATKHC_9121:HG2_Ill_GATKHCSBGrefine_3757:HG2_Ill_250bpfermikitraw_7640;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0322581;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.0327869;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-61;DistBack=15;DistForward=35148;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=5:6180833-6180932;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=3067.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:60:./.:14:20:2:28:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr5	6524375	HG4_10X_allpass_1052	GGAAAGTTACAAGGAGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCTGGCGCCTGTAGTCCCAGCTACTCGGGATGCTGAGGCAGGAGAATGGCGTGAACCTGGGAAGCGGAGCTTGCGGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3888:HG3_PB_assemblyticsfalcon_20882:HG3_PB_SVrefine2Falcon1Dovetail_3458:HG2_10X_allpass_892:HG2_Ill_MetaSV_3889:HG4_Ill_Krunchall_8071:HG2_Ill_Krunchall_7792:HG2_PB_assemblyticsfalcon_20947:HG4_PB_assemblyticsfalcon_20479:HG4_PB_pbsv_5597:HG2_PB_SVrefine2PB10Xhap12_4031:HG4_PB_SVrefine2Falcon1Dovetail_3390:HG4_Ill_manta_1365:HG4_Ill_SVrefine2DISCOVARDovetail_4116:HG4_10X_allpass_1052:HG2_PB_pbsv_5566:HG2_PB_SVrefine2PB10Xhap12_4030:HG2_PB_SVrefine2Falcon2Bionano_2739:HG2_PB_SVrefine2Falcon1plusDovetail_9411:HG2_PB_HySA_10267:HG2_Ill_SVrefine2DISCOVARplusDovetail_10148:HG2_Ill_GATKHCSBGrefine_3759:HG2_10X_SVrefine210Xhap12_3999:HG2_Ill_tnscope_614;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3999:HG2_Ill_GATKHCSBGrefine_3759:HG2_Ill_SVrefine2DISCOVARplusDovetail_10148:HG2_PB_HySA_10267:HG2_PB_SVrefine2Falcon1plusDovetail_9411:HG2_PB_SVrefine2Falcon2Bionano_2739:HG2_PB_SVrefine2PB10Xhap12_4030:HG2_PB_pbsv_5566:HG4_10X_allpass_1052:HG4_Ill_SVrefine2DISCOVARDovetail_4116:HG4_Ill_manta_1365:HG4_PB_SVrefine2Falcon1Dovetail_3390;NumExactMatchSVs=12;ClusterMaxShiftDist=0.205279;ClusterMaxSizeDiff=0.205279;ClusterMaxEditDist=0.205279;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=-219;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:6524376-6524709;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3069.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:30:0|1:43:1:1:28:./.:0:0:0:0:0/1:24:19:0/1:16:7:.:.:.
chr5	7221928	HG2_Ill_scalpel_5372	TCCATATGCAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCAGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4006:HG3_PB_HySA_8489:HG2_10X_allpass_893:HG2_PB_assemblyticsfalcon_20958:HG3_Ill_Krunchall_7653:HG2_Ill_Krunchall_7803:HG3_Ill_GATKHCSBGrefine_3702:HG2_Ill_GATKHCSBGrefine_3761:HG2_PB_PB10Xdip_24240:HG3_PB_SVrefine2Falcon1Dovetail_3463:HG3_Ill_manta_1282:HG2_Ill_manta_1566:HG2_Ill_SVrefine2DISCOVARplusDovetail_10150:HG3_Ill_Spiral_6016:HG2_Ill_Spiral_406:HG3_PB_pbsv_5414:HG2_PB_pbsv_5572:HG3_Ill_MetaSV_4074:HG2_Ill_MetaSV_3891:HG2_Ill_tnscope_615:HG4_PB_SVrefine2Falcon1Dovetail_3396:HG3_PB_assemblyticsfalcon_20891:HG3_PB_SVrefine2PBcRDovetail_2567:HG3_Ill_scalpel_5463:HG3_10X_allpass_1103:HG2_PB_SVrefine2PB10Xhap12_4038:HG2_PB_SVrefine2Falcon1plusDovetail_9417:HG2_Ill_scalpel_5372:HG2_Ill_breakscan11_803:HG2_Ill_SpiralSDKrefine_13266;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4006:HG4_PB_SVrefine2Falcon1Dovetail_3396:HG3_PB_assemblyticsfalcon_20891:HG3_PB_SVrefine2PBcRDovetail_2567:HG3_Ill_scalpel_5463:HG3_10X_allpass_1103:HG2_PB_SVrefine2PB10Xhap12_4038:HG2_PB_SVrefine2Falcon1plusDovetail_9417:HG2_Ill_scalpel_5372:HG2_Ill_breakscan11_803:HG2_Ill_SpiralSDKrefine_13266;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0888889;ClusterMaxSizeDiff=0.0888889;ClusterMaxEditDist=0.0888889;PBcalls=11;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=21569;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:7221929-7222262;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9969;PctRecOverlap=0.9875;SizeDiff=1;StartDistance=-4;EndDistance=-3;GTMatch=0;TruScore=99;MatchId=3070.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:22:0|1:32:0:0:20:./.:0:0:0:0:0/1:54:28:0/1:25:8:.:.:0.818387
chr5	8027040	HG2_Ill_scalpel_5380	GAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGATCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTTTTTTTTTTA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_5420:HG4_PB_pbsv_5608:HG4_Ill_GATKHCSBGrefine_3923:HG3_Ill_scalpel_5469:HG3_Ill_GATKHCSBGrefine_3705:HG3_10X_allpass_1104:HG2_PB_pbsv_5578:HG2_Ill_scalpel_5380:HG2_Ill_GATKHCSBGrefine_3766:HG2_PB_SVrefine2PB10Xhap12_4049:HG3_PB_assemblyticsfalcon_20903:HG4_PB_SVrefine2PBcRDovetail_2829:HG4_PB_SVrefine2Falcon1Dovetail_3403:HG4_PB_HySA_8260:HG4_Ill_SVrefine2DISCOVARDovetail_4123:HG2_PB_SVrefine2PBcRplusDovetail_8766:HG2_PB_SVrefine2PB10Xhap12_4048:HG2_10X_SVrefine210Xhap12_4015:HG4_Ill_manta_1366:HG3_Ill_manta_1284:HG2_Ill_manta_1568:HG3_Ill_MetaSV_4077:HG2_PB_assemblyticsfalcon_20966:HG3_PB_SVrefine2PBcRDovetail_2573:HG3_PB_SVrefine2Falcon1Dovetail_3469:HG3_Ill_SVrefine2DISCOVARDovetail_4214:HG2_PB_SVrefine2Falcon2Bionano_2748:HG2_Ill_SVrefine2DISCOVARplusDovetail_10155:HG2_10X_SVrefine210Xhap12_4014:HG3_Ill_MetaSV_4076:HG2_Ill_MetaSV_3894:HG3_PB_HySA_8496:HG2_PB_SVrefine2Falcon1plusDovetail_9420:HG2_Ill_tnscope_617;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3766:HG2_Ill_scalpel_5380:HG2_PB_pbsv_5578:HG3_10X_allpass_1104:HG3_Ill_GATKHCSBGrefine_3705:HG3_Ill_scalpel_5469:HG4_Ill_GATKHCSBGrefine_3923;NumExactMatchSVs=7;ClusterMaxShiftDist=0.209106;ClusterMaxSizeDiff=0.209106;ClusterMaxEditDist=0.209459;PBcalls=16;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-293;DistBack=3225;DistForward=-293;DistMin=-293;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=293;REFWIDENED=5:8027030-8027615;PctSeqSimilarity=0.8849;PctSizeSimilarity=0.9513;PctRecOverlap=0.9159;SizeDiff=-15;StartDistance=26;EndDistance=11;GTMatch=0;TruScore=91;MatchId=3071.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:46:0|1:31:2:2:42:./.:0:0:0:0:0/1:22:12:./.:.:.:.:.:.
chr5	8937847	HG3_Ill_manta_1286	GCTAAATTGTGGGGAAAAGGAAGAGAGATCAGATTGTTACTGTGTCTGTGTAGAAAGAAGTAGACATAGGAGACTCCATTTTGTTATGTACTAAGAAAAATTCTTCTGCCTTGAGATTCTGTTAATCTATAACCTTACCCCAACCCTGTGCTCTCTGAAACATGTGCTCTGTCAACTCAGAGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCCTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAAAACTGCGGAAGGCCGCAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGTCTGAAATATGGCCTCGTGGGAAGGGAAAGACCTGACCGTCCCCCAGCCCGACACCCGTAAAGGGTCTGTGCTGAGGAGGATTAGTAAAAGAGGAAGGAATGCCTCTTGCAGTTGAGACAAGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCAGTATAAAACCCGATTGTATGCTCCATCTACTGAGGTAGGGAAAAACCGCCTTAGGGCTGGAGGTGGGACCTGCGGGCAGCAATACTGCTTTGTAAAGCATTGAGATGTTTATGTGTATGCATATCTAAAAGCACAGCACTTAATCCTTTACATTGTCTATGACGCAAAGACCTTTGTTCACGTGTTTGTCTGCTGACCCTCTCCCCACAATTGTCTTGTGACCCTGACACATCCCCCTCTTTGAGAAACACCCACAGATGATCAATAAATACTAAGGGAACTCAGAGGCTGGCGGGATCCTCCATATGCTGAACCCTGGTTCCCCGGGTCCCCTTATTTCTTTCTCTATACTTTGTCTCTGTGTCTTTTTCTTTCCTAAGTCTCTCATTCCACCTTACGAGAAACACCCACAGGTGTGGAGGGGCAACCCACCCCTACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4018:HG3_PB_assemblyticsfalcon_20913:HG3_PB_SVrefine2Falcon1Dovetail_3472:HG3_Ill_Krunchall_7670:HG2_Ill_Krunchall_7826:HG2_10X_allpass_894:HG2_Ill_tnscope_619:HG3_Ill_manta_1286:HG3_Ill_MetaSV_4081:HG3_10X_allpass_1105:HG2_PB_pbsv_5580:HG2_Ill_manta_1569:HG2_Ill_SpiralSDKrefine_13284:HG2_Ill_MetaSV_3897:HG2_Ill_GATKHCSBGrefine_3822;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4018:HG3_Ill_manta_1286:HG3_Ill_MetaSV_4081:HG3_10X_allpass_1105:HG2_PB_pbsv_5580:HG2_Ill_manta_1569:HG2_Ill_SpiralSDKrefine_13284:HG2_Ill_MetaSV_3897:HG2_Ill_GATKHCSBGrefine_3822;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00927357;ClusterMaxSizeDiff=0.00927357;ClusterMaxEditDist=0.0123267;PBcalls=3;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-973;DistBack=-14;DistForward=-901;DistMin=-901;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=5:8937848-8938826;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3072.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:43:30:0|1:42:0:0:24:./.:0:0:0:0:0/1:54:7:0/1:85:46:.:.:.
chr5	9162578	HG2_PB_SVrefine2Falcon2Bionano_2751	ATATATATGTGTGTGTGTATATATGTATATGTGTATATATAGGAATATATGTGTATATGTGTATATATATGTATGTGTGTATATATGTGTGTGTGTGTGTATATATATA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_5581:HG4_Ill_GATKHC_9249:HG4_Ill_GATKHCSBGrefine_3925:HG3_Ill_GATKHC_9152:HG3_Ill_GATKHCSBGrefine_3706:HG2_Ill_GATKHC_9158:HG2_Ill_GATKHCSBGrefine_3823:HG4_PB_assemblyticsfalcon_20503:HG3_PB_assemblyticsfalcon_20915:HG3_PB_SVrefine2Falcon1Dovetail_3473:HG4_PB_SVrefine2PBcRDovetail_2832:HG4_PB_SVrefine2Falcon1Dovetail_3406:HG4_Ill_manta_1369:HG4_Ill_SVrefine2DISCOVARDovetail_4124:HG3_Ill_manta_1287:HG3_Ill_SVrefine2DISCOVARDovetail_4218:HG2_PB_SVrefine2PBcRplusDovetail_8769:HG2_PB_SVrefine2PB10Xhap12_4053:HG2_PB_SVrefine2Falcon2Bionano_2751:HG2_PB_SVrefine2Falcon1plusDovetail_9422:HG2_Ill_manta_1570:HG2_Ill_SVrefine2DISCOVARplusDovetail_10158:HG2_10X_SVrefine210Xhap12_4019:HG2_Ill_SpiralSDKrefine_13286:HG3_PB_SVrefine2PBcRDovetail_2575:HG2_PB_assemblyticsfalcon_20976:HG2_PB_assemblyticsPBcR_20273:HG2_PB_HySA_10309:HG4_Ill_svaba_7200:HG4_Ill_scalpel_5287:HG4_10X_allpass_1053:HG3_Ill_svaba_7176:HG3_Ill_scalpel_5476:HG2_Ill_svaba_7075:HG2_Ill_scalpel_5387:HG2_Ill_250bpfermikitraw_7675:HG2_Ill_150bpfermikitraw_7163:HG2_10X_allpass_895:HG4_PB_pbsv_5614:HG3_PB_pbsv_5424:HG4_Ill_Krunchall_8097:HG3_Ill_Krunchall_7672:HG2_Ill_Krunchall_7828;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4019:HG2_Ill_SVrefine2DISCOVARplusDovetail_10158:HG2_Ill_manta_1570:HG2_PB_SVrefine2Falcon1plusDovetail_9422:HG2_PB_SVrefine2Falcon2Bionano_2751:HG2_PB_SVrefine2PB10Xhap12_4053:HG2_PB_SVrefine2PBcRplusDovetail_8769:HG3_Ill_SVrefine2DISCOVARDovetail_4218:HG3_Ill_manta_1287:HG4_Ill_SVrefine2DISCOVARDovetail_4124:HG4_Ill_manta_1369:HG4_PB_SVrefine2Falcon1Dovetail_3406:HG4_PB_SVrefine2PBcRDovetail_2832;NumExactMatchSVs=13;ClusterMaxShiftDist=0.156863;ClusterMaxSizeDiff=0.156863;ClusterMaxEditDist=0.187192;PBcalls=16;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-108;DistBack=-119;DistForward=-79;DistMin=-119;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:9162578-9162686;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=0.9817;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=3073.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:0:23:1:4:./.:0:0:0:0:1/1:0:44:./.:.:.:.:.:.
chr5	9400610	HG2_10X_SVrefine210Xhap12_4021	TACATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4021:HG2_PB_SVrefine2PB10Xhap12_4055:HG2_PB_assemblyticsPBcR_20277:HG2_PB_PB10Xdip_24435:HG3_Ill_Krunchall_7675:HG2_PB_SVrefine2Falcon1plusDovetail_9423:HG3_Ill_MetaSV_4082:HG2_Ill_tnscope_620:HG2_Ill_MetaSV_3898:HG3_PB_pbsv_5425:HG3_Ill_scalpel_5478:HG3_Ill_manta_1289:HG3_Ill_SVrefine2DISCOVARDovetail_4219:HG3_Ill_GATKHCSBGrefine_3708:HG3_10X_allpass_1106:HG2_PB_pbsv_5583:HG2_PB_SVrefine2PBcRplusDovetail_8770:HG2_PB_SVrefine2PB10Xhap12_4054:HG2_PB_SVrefine2Falcon2Bionano_2753:HG2_PB_HySA_10315:HG2_Ill_scalpel_5390:HG2_Ill_breakscan11_804:HG2_Ill_GATKHCSBGrefine_3825:HG2_10X_allpass_896;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4021:HG3_PB_pbsv_5425:HG3_Ill_scalpel_5478:HG3_Ill_manta_1289:HG3_Ill_SVrefine2DISCOVARDovetail_4219:HG3_Ill_GATKHCSBGrefine_3708:HG3_10X_allpass_1106:HG2_PB_pbsv_5583:HG2_PB_SVrefine2PBcRplusDovetail_8770:HG2_PB_SVrefine2PB10Xhap12_4054:HG2_PB_SVrefine2Falcon2Bionano_2753:HG2_PB_HySA_10315:HG2_Ill_scalpel_5390:HG2_Ill_breakscan11_804:HG2_Ill_GATKHCSBGrefine_3825:HG2_10X_allpass_896;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0636704;ClusterMaxSizeDiff=0.0636704;ClusterMaxEditDist=0.0636704;PBcalls=10;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-270;DistBack=15858;DistForward=9090;DistMin=9090;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=5:9400611-9400889;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3074.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:42:./.:17:23:8:15:./.:0:0:0:0:0/1:25:19:./.:.:.:.:.:.
chr5	9411760	HG4_Ill_scalpel_5289	TAAAAATTAATCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4023:HG4_PB_HySA_8268:HG2_PB_HySA_10318:HG3_PB_assemblyticsfalcon_20919:HG4_PB_assemblyticsfalcon_20508:HG2_PB_assemblyticsfalcon_20979:HG2_PB_assemblyticsPBcR_20279:HG4_Ill_Krunchall_8100:HG3_Ill_Krunchall_7677:HG2_Ill_Krunchall_7832:HG4_Ill_MetaSV_4068:HG3_Ill_MetaSV_4083:HG2_PB_HySA_10317:HG2_Ill_MetaSV_3899:HG4_Ill_svaba_7204:HG4_Ill_scalpel_5289:HG4_Ill_manta_1371:HG4_Ill_GATKHCSBGrefine_3927:HG4_10X_allpass_1054:HG3_PB_pbsv_5426:HG3_Ill_svaba_7180:HG3_Ill_scalpel_5480:HG3_Ill_manta_1290:HG3_Ill_GATKHCSBGrefine_3709:HG3_10X_allpass_1107:HG2_PB_pbsv_5584:HG2_Ill_svaba_7080:HG2_Ill_scalpel_5392:HG2_Ill_manta_1572:HG2_Ill_GATKHCSBGrefine_3826:HG2_10X_allpass_897:HG2_Ill_breakscan11_805:HG2_Ill_tnscope_621:HG4_PB_pbsv_5616:HG4_PB_SVrefine2PBcRDovetail_2834:HG4_PB_SVrefine2Falcon1Dovetail_3408:HG4_Ill_SVrefine2DISCOVARDovetail_4125:HG3_PB_SVrefine2PBcRDovetail_2576:HG3_PB_SVrefine2Falcon1Dovetail_3474:HG3_PB_HySA_8511:HG3_Ill_SVrefine2DISCOVARDovetail_4221:HG2_PB_SVrefine2PBcRplusDovetail_8771:HG2_PB_SVrefine2PB10Xhap12_4057:HG2_PB_SVrefine2Falcon2Bionano_2755:HG2_PB_SVrefine2Falcon1plusDovetail_9424:HG2_Ill_SVrefine2DISCOVARplusDovetail_10160;NumClusterSVs=46;ExactMatchIDs=HG2_10X_allpass_897:HG2_Ill_GATKHCSBGrefine_3826:HG2_Ill_manta_1572:HG2_Ill_scalpel_5392:HG2_Ill_svaba_7080:HG2_PB_pbsv_5584:HG3_10X_allpass_1107:HG3_Ill_GATKHCSBGrefine_3709:HG3_Ill_manta_1290:HG3_Ill_scalpel_5480:HG3_Ill_svaba_7180:HG3_PB_pbsv_5426:HG4_10X_allpass_1054:HG4_Ill_GATKHCSBGrefine_3927:HG4_Ill_manta_1371:HG4_Ill_scalpel_5289:HG4_Ill_svaba_7204;NumExactMatchSVs=17;ClusterMaxShiftDist=0.120718;ClusterMaxSizeDiff=0.120718;ClusterMaxEditDist=0.120718;PBcalls=19;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=1752;DistForward=14468;DistMin=1752;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=5:9411756-9412088;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3075.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:75:1/1:3:42:1:20:./.:0:0:0:0:1/1:0:43:0/1:2:15:.:.:.
chr5	9990098	HG2_PB_SVrefine2PB10Xhap12_4059	GGGTGCAGTCCACGGAATGTGAGCCGAAGCACGGGCATCGCCTCACCTGGGAAGCACAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCCGTGACAGATGGTACCTGGAAAATCAGGACACTCCCACCCTAATACTGCGCTTTTCCAATGGTATTAGCAAATGGCACACCAGGAGATTATATCCCACACCTGGCTCTGAGGGTCCCAT	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_407:HG2_PB_HySA_10324:HG4_Ill_Krunchall_8104:HG3_Ill_Krunchall_7683:HG2_Ill_Krunchall_7839:HG4_PB_assemblyticsfalcon_20511:HG4_PB_SVrefine2PBcRDovetail_2836:HG4_PB_SVrefine2Falcon1Dovetail_3409:HG4_Ill_svaba_7206:HG4_Ill_scalpel_5291:HG4_Ill_manta_1372:HG4_Ill_SVrefine2DISCOVARDovetail_4126:HG4_Ill_GATKHCSBGrefine_3928:HG4_10X_allpass_1055:HG3_PB_assemblyticsfalcon_20923:HG3_PB_SVrefine2PBcRDovetail_2577:HG3_PB_SVrefine2Falcon1Dovetail_3475:HG3_Ill_svaba_7187:HG3_Ill_scalpel_5487:HG3_Ill_manta_1291:HG3_Ill_SVrefine2DISCOVARDovetail_4222:HG3_Ill_GATKHCSBGrefine_3710:HG3_10X_allpass_1108:HG2_PB_assemblyticsfalcon_20984:HG2_PB_assemblyticsPBcR_20284:HG2_PB_SVrefine2PBcRplusDovetail_8773:HG2_PB_SVrefine2PB10Xhap12_4059:HG2_PB_SVrefine2Falcon2Bionano_2757:HG2_PB_SVrefine2Falcon1plusDovetail_9425:HG2_Ill_svaba_7087:HG2_Ill_scalpel_5397:HG2_Ill_manta_1573:HG2_Ill_SpiralSDKrefine_13295:HG2_Ill_SVrefine2DISCOVARplusDovetail_10162:HG2_Ill_MetaSV_3900:HG2_Ill_GATKHCSBGrefine_3827:HG2_10X_allpass_898:HG2_10X_SVrefine210Xhap12_4025:HG4_Ill_Krunchall_8103:HG2_Ill_breakscan11_806:HG2_Ill_Krunchall_7838:HG3_PB_pbsv_5427:HG2_PB_pbsv_5586:HG4_PB_pbsv_5618:HG3_PB_HySA_8517:HG4_Ill_Spiral_455:HG4_Ill_MetaSV_4069:HG3_Ill_MetaSV_4084;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4025:HG2_10X_allpass_898:HG2_Ill_GATKHCSBGrefine_3827:HG2_Ill_MetaSV_3900:HG2_Ill_SVrefine2DISCOVARplusDovetail_10162:HG2_Ill_SpiralSDKrefine_13295:HG2_Ill_manta_1573:HG2_Ill_scalpel_5397:HG2_Ill_svaba_7087:HG2_PB_SVrefine2Falcon1plusDovetail_9425:HG2_PB_SVrefine2Falcon2Bionano_2757:HG2_PB_SVrefine2PB10Xhap12_4059:HG2_PB_SVrefine2PBcRplusDovetail_8773:HG2_PB_assemblyticsPBcR_20284:HG2_PB_assemblyticsfalcon_20984:HG3_10X_allpass_1108:HG3_Ill_GATKHCSBGrefine_3710:HG3_Ill_SVrefine2DISCOVARDovetail_4222:HG3_Ill_manta_1291:HG3_Ill_scalpel_5487:HG3_Ill_svaba_7187:HG3_PB_SVrefine2Falcon1Dovetail_3475:HG3_PB_SVrefine2PBcRDovetail_2577:HG3_PB_assemblyticsfalcon_20923:HG4_10X_allpass_1055:HG4_Ill_GATKHCSBGrefine_3928:HG4_Ill_SVrefine2DISCOVARDovetail_4126:HG4_Ill_manta_1372:HG4_Ill_scalpel_5291:HG4_Ill_svaba_7206:HG4_PB_SVrefine2Falcon1Dovetail_3409:HG4_PB_SVrefine2PBcRDovetail_2836:HG4_PB_assemblyticsfalcon_20511;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0186047;ClusterMaxSizeDiff=0.0186047;ClusterMaxEditDist=0.0186047;PBcalls=17;Illcalls=27;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-213;DistBack=19243;DistForward=-213;DistMin=-213;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:9990099-9990312;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3076.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:12:0:11:./.:0:0:0:0:1/1:0:40:./.:.:.:.:.:.
chr5	10005264	HG4_PB_SVrefine2PBcRDovetail_2837	TAAAAGAACAGAAATTGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAACTACAAAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4026:HG2_PB_SVrefine2Falcon1plusDovetail_9426:HG2_PB_PB10Xdip_24480:HG2_PB_PB10Xdip_24479:HG4_PB_SVrefine2Falcon1Dovetail_3410:HG3_PB_assemblyticsfalcon_20924:HG3_PB_SVrefine2Falcon1Dovetail_3476:HG2_PB_assemblyticsfalcon_20985:HG4_PB_assemblyticsfalcon_20512:HG2_PB_HySA_10326:HG2_PB_assemblyticsPBcR_20285:HG2_PB_HySA_10325:HG2_PB_pbsv_5587:HG4_PB_pbsv_5619:HG3_PB_pbsv_5428:HG4_PB_SVrefine2PBcRDovetail_2837:HG4_Ill_SVrefine2DISCOVARDovetail_4127:HG3_PB_SVrefine2PBcRDovetail_2578:HG3_Ill_SVrefine2DISCOVARDovetail_4223:HG2_PB_SVrefine2PBcRplusDovetail_8774:HG2_PB_SVrefine2PB10Xhap12_4060:HG2_PB_SVrefine2Falcon2Bionano_2758:HG2_Ill_SVrefine2DISCOVARplusDovetail_10163;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4026:HG4_PB_SVrefine2PBcRDovetail_2837:HG4_Ill_SVrefine2DISCOVARDovetail_4127:HG3_PB_SVrefine2PBcRDovetail_2578:HG3_Ill_SVrefine2DISCOVARDovetail_4223:HG2_PB_SVrefine2PBcRplusDovetail_8774:HG2_PB_SVrefine2PB10Xhap12_4060:HG2_PB_SVrefine2Falcon2Bionano_2758:HG2_Ill_SVrefine2DISCOVARplusDovetail_10163;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0944351;ClusterMaxSizeDiff=0.0944351;ClusterMaxEditDist=0.0944351;PBcalls=19;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-301;DistBack=15164;DistForward=15449;DistMin=15164;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:10005264-10014519;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3077.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:15:./.:0:9:0:4:./.:0:0:0:0:./.:0:0:1/1:2:21:.:.:.
chr5	10273200	HG3_PB_SVrefine2Falcon1Dovetail_3477	ACTCCCACCAAGTCTCTCCCATGACACGTGGGGATTATGGGAACTACAATTCAAGATGAGATTTGAGTGAGGACACAGCCAAACCACATCAGTCAGGCTCACATCTCTGCTTCCTGTTACTGTGCTCCTTCCCTCTCCAGAGGGGCCGAACTTTAATCTTTCTAAAATGCAAATACCATTGATAAGTTCTGCTGCTCTCATCTAAAGGCCTGAAAAGCACATCCCCACCTTGGGACTCAGAGGGGCCAGCCCTACCGGGACTGGCTGCCCTTTTACAGAAGAAGGGGTGGGGTGATCCTGAGGCCGCAGGCATCCTTCTTGCTTGGTCTTCTAGAACAGGAATGCACTGAGTTTGCAGGTTGCTGGCGCCCCAGGACTGATAAGACTGCCCACGTTGGCCAGGCATTGGGATAACTCTTCCCTTGGAGCAGGCTGTCCACCATCTTGCCTCTTAGGGTGCATGCTTGGGTCTGCTTGCCCAAATCCTGAGATCTTATCAGGAAGCTACTGATCACCAGCTTCAGATGTTTCTCTCTATAGGGAGACTGCCTTTCCCTGGTGCTGGCTGTGACCAAGTATTATTTTAGAGAGACAGTTTAACAACCACCTGACCATCGCCTGATGGCCACCTGACATTCCTGGGGAGGTAGACCTCTCCTGCCCTGCTTATGTCTTCCTGACTACCTACTCTAACAATGCACCCCTGCAGAGTTATGTTATTTTACTGAGTTTATAGCTTTTACATTGAGAAAAACTGAGGGTCAGAGAAGCACATTGCCCAAACCCACAAGCTAAACATGAAGCATGGATACACCCAGCTTTTCCCTCCTGAGCCTCCTCTTCTCACCCTCGTCTTCCTCACACTCTCCCTCTGCCATACCCGCCACAGCCACCTCATGGATGACTCCCAACGTTACAGAGCCACATGGGTCTCATACAACTGCCCCCCACAACCAGCCTCCACACTCCTCTTCATAGCCCACCAAAGCCCAGCTCTGTCCAGAGGGAGCGCACCCCATCCCTGGCTAAGTGAGTCAGGGTCTAATCCAATCCCGTCACCAATTCCCCTTCAGCTGATGCCCAGGTCCTCGGCCTCTCCCATGACACAGGGGGCACACAGCTGGGGGATTTCCCTCCCTCTCTAAAACAGAGGTGCAGGAGAGAGCTCCTTCCTTCCCTTCCTGTTGTGGCTGGGATTTGTAAGGCCCTAGGGCCCAGAGAATGCAGACACCAACCCGGGTCCTGACACCAGGAAACCCCCAAACCACCTGAGATCCCTGGAGGACTGTGTGGGAGATACTTAAATGTTACCCTCTTAGCCACTGTCAGTCAGGTTTTCTGTTATTTGCAGCCCAAGAAAACTCAACTGATATTCCAGGCTGAACCAAACTTAAATTGTTTCCTCACAGCCCGCTTCTCTTCAGGATTCTGTGCTGGATAATTTGTGCTGGATAATCTCTAAGCCAACCTCAGGGTCTTGCTTCTTGGTGTCCTCTCAGTCTCTGCAGTAAAAGCAGTTGCATCTCTCAGCAACTCTCCACTCTGCTGCCTCGGTCAGTGTATTAGTCTGTTCTCACGCTGCTACTAAAGACATACCTGAGACTTGGTAATTTATAAAGAAAAGAAGTTTAATTGACTCACAGTTCAGCATGGCTGGGGAGGCCTCAGGAAACTTACAGTCATGGTGGAAAGGGAAGCAGGCACATCCTTCTTCACATGGCAGCAGCAAGGAGACATACAGTGCGAAGTGGGAGGAAAGCCCCTCATGAAACCATCAGATCTTGTGAGAACTCACTCACTTTCATGAGAACAGAAGGGAGGTAACTGCCCCTATGATACAATTAC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_5621:HG2_PB_pbsv_5589:HG2_Ill_MetaSV_3901:HG4_10X_allpass_1056:HG4_PB_SVrefine2PBcRDovetail_2838:HG4_PB_SVrefine2Falcon1Dovetail_3411:HG4_Ill_SVrefine2DISCOVARDovetail_4129:HG3_PB_SVrefine2Falcon1Dovetail_3477:HG2_PB_SVrefine2PBcRplusDovetail_8775:HG2_PB_SVrefine2PB10Xhap12_4061:HG2_PB_SVrefine2Falcon1plusDovetail_9427;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9427:HG2_PB_SVrefine2PB10Xhap12_4061:HG2_PB_SVrefine2PBcRplusDovetail_8775:HG3_PB_SVrefine2Falcon1Dovetail_3477:HG4_Ill_SVrefine2DISCOVARDovetail_4129:HG4_PB_SVrefine2Falcon1Dovetail_3411:HG4_PB_SVrefine2PBcRDovetail_2838;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0746541;ClusterMaxSizeDiff=0.0746541;ClusterMaxEditDist=0.0756982;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-1844;DistBack=63596;DistForward=-1814;DistMin=-1814;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=413;REFWIDENED=5:10273201-10275457;PctSeqSimilarity=0.9875;PctSizeSimilarity=1;PctRecOverlap=0.9843;SizeDiff=0;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=99;MatchId=3078.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:53:0|1:30:0:1:33:./.:0:0:0:0:0/0:63:1:0/1:130:52:1853:.:.
chr5	11339025	HG2_PB_SVrefine2PB10Xhap12_4068	ACAGTTCCTTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGAACTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_allpass_901:HG4_PB_assemblyticsfalcon_20531:HG2_PB_assemblyticsPBcR_20307:HG3_PB_assemblyticsfalcon_20945:HG2_PB_assemblyticsfalcon_21003:HG4_Ill_Krunchall_8120:HG3_Ill_Krunchall_7697:HG2_Ill_Krunchall_7850:HG3_PB_pbsv_5444:HG2_PB_pbsv_5604:HG4_PB_pbsv_5636:HG2_PB_HySA_10354:HG4_PB_HySA_8286:HG4_Ill_MetaSV_4073:HG3_Ill_MetaSV_4088:HG2_Ill_tnscope_624:HG2_Ill_MetaSV_3905:HG4_PB_SVrefine2PBcRDovetail_2844:HG4_PB_SVrefine2Falcon1Dovetail_3420:HG4_Ill_scalpel_5305:HG4_Ill_manta_1377:HG4_Ill_SVrefine2DISCOVARDovetail_4135:HG4_Ill_GATKHCSBGrefine_3947:HG4_10X_allpass_1060:HG3_PB_SVrefine2PBcRDovetail_2585:HG3_PB_SVrefine2Falcon1Dovetail_3483:HG3_Ill_scalpel_5506:HG3_Ill_manta_1294:HG3_Ill_SVrefine2DISCOVARDovetail_4233:HG3_Ill_GATKHCSBGrefine_3727:HG3_10X_allpass_1111:HG2_PB_SVrefine2PBcRplusDovetail_8782:HG2_PB_SVrefine2PB10Xhap12_4068:HG2_PB_SVrefine2Falcon2Bionano_2767:HG2_PB_SVrefine2Falcon1plusDovetail_9435:HG2_Ill_scalpel_5416:HG2_Ill_manta_1579:HG2_Ill_breakscan11_808:HG2_Ill_SpiralSDKrefine_13306:HG2_Ill_SVrefine2DISCOVARplusDovetail_10173:HG2_Ill_GATKHCSBGrefine_3848;NumClusterSVs=41;ExactMatchIDs=HG2_10X_allpass_901:HG4_PB_SVrefine2PBcRDovetail_2844:HG4_PB_SVrefine2Falcon1Dovetail_3420:HG4_Ill_scalpel_5305:HG4_Ill_manta_1377:HG4_Ill_SVrefine2DISCOVARDovetail_4135:HG4_Ill_GATKHCSBGrefine_3947:HG4_10X_allpass_1060:HG3_PB_SVrefine2PBcRDovetail_2585:HG3_PB_SVrefine2Falcon1Dovetail_3483:HG3_Ill_scalpel_5506:HG3_Ill_manta_1294:HG3_Ill_SVrefine2DISCOVARDovetail_4233:HG3_Ill_GATKHCSBGrefine_3727:HG3_10X_allpass_1111:HG2_PB_SVrefine2PBcRplusDovetail_8782:HG2_PB_SVrefine2PB10Xhap12_4068:HG2_PB_SVrefine2Falcon2Bionano_2767:HG2_PB_SVrefine2Falcon1plusDovetail_9435:HG2_Ill_scalpel_5416:HG2_Ill_manta_1579:HG2_Ill_breakscan11_808:HG2_Ill_SpiralSDKrefine_13306:HG2_Ill_SVrefine2DISCOVARplusDovetail_10173:HG2_Ill_GATKHCSBGrefine_3848;NumExactMatchSVs=25;ClusterMaxShiftDist=0.104101;ClusterMaxSizeDiff=0.104101;ClusterMaxEditDist=0.104101;PBcalls=17;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=26202;DistForward=7689;DistMin=7689;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:11339026-11339366;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3079.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:1:34:0:25:./.:0:0:0:0:1/1:0:40:./.:2:16:.:.:.
chr5	11641855	HG2_PB_assemblyticsPBcR_20311	TACGTGTGTATGTACATACATATACGTATATGTATGTACATACATACACGTGTACATAC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7189:HG3_PB_pbsv_5445:HG2_PB_pbsv_5606:HG3_Ill_svaba_7207:HG3_Ill_scalpel_5509:HG3_Ill_Krunchall_7700:HG3_Ill_GATKHC_9187:HG3_Ill_GATKHCSBGrefine_3728:HG3_Ill_250bpfermikitraw_7422:HG3_Ill_150bpfermikitraw_7238:HG2_PB_assemblyticsPBcR_20311:HG2_Ill_svaba_7106:HG2_Ill_scalpel_5419:HG2_Ill_manta_1580:HG2_Ill_Krunchall_7854:HG2_Ill_GATKHC_9192:HG2_Ill_GATKHCSBGrefine_3849:HG2_Ill_250bpfermikitraw_7701;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7189:HG3_Ill_svaba_7207:HG3_Ill_scalpel_5509:HG3_Ill_Krunchall_7700:HG3_Ill_GATKHC_9187:HG3_Ill_GATKHCSBGrefine_3728:HG3_Ill_250bpfermikitraw_7422:HG3_Ill_150bpfermikitraw_7238:HG2_PB_assemblyticsPBcR_20311:HG2_Ill_svaba_7106:HG2_Ill_scalpel_5419:HG2_Ill_manta_1580:HG2_Ill_Krunchall_7854:HG2_Ill_GATKHC_9192:HG2_Ill_GATKHCSBGrefine_3849:HG2_Ill_250bpfermikitraw_7701;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0344828;PBcalls=3;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=-9;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=212;REFWIDENED=5:11641674-11641943;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3080.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:36:0|1:45:4:2:30:./.:0:0:0:0:0/1:32:22:./.:.:.:.:.:.
chr5	11816716	HG3_PB_SVrefine2Falcon1Dovetail_3484	GGGAAGAGAGAGAGAGAGGGAAGAGGGAGAGGGGGGGAAGAGAGAGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGGGGGGGAGAGAGGGGGGAGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGAGGGGGAGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGGGGGAGAGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGAGGGGGGGAGAGAGGGGGGAGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGAGGAGGAGGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGGAGGAGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGGAGGAGAGAGAGAGAGGAGGAGGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGAGGAGGAGGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGAGGAGGAGGAGAGAGAGAGAGAGGAGGAGAGAGAGAGAGGA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8784:HG2_PB_pbsv_5607:HG3_PB_pbsv_5446:HG3_PB_SVrefine2PBcRDovetail_2586:HG2_PB_SVrefine2Falcon1plusDovetail_9436:HG2_PB_SVrefine2PB10Xhap12_4071:HG4_PB_SVrefine2PBcRDovetail_2846:HG4_PB_SVrefine2Falcon1Dovetail_3422:HG3_PB_SVrefine2Falcon1Dovetail_3484:HG2_PB_SVrefine2Falcon2Bionano_2768:HG4_PB_pbsv_5638;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2768:HG3_PB_SVrefine2Falcon1Dovetail_3484:HG4_PB_SVrefine2Falcon1Dovetail_3422:HG4_PB_SVrefine2PBcRDovetail_2846;NumExactMatchSVs=4;ClusterMaxShiftDist=0.210117;ClusterMaxSizeDiff=0.210117;ClusterMaxEditDist=0.210117;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-515;DistBack=-796;DistForward=-469;DistMin=-796;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=291;REFWIDENED=5:11816717-11817518;PctSeqSimilarity=0.9211;PctSizeSimilarity=0.9728;PctRecOverlap=0.8992;SizeDiff=14;StartDistance=-52;EndDistance=-38;GTMatch=0;TruScore=93;MatchId=3081.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:36:./.:18:17:9:11:./.:0:0:0:0:0/0:10:0:0/1:20:5:.:.:.
chr5	12037489	HG2_10X_allpass_902	ACCAACTCTGGTAATATGACAAAACAAGGTTATTTAACAGCCCCCCAAAATCACATTAGCTTACCAGCAATGGACCCAAAC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_5609:HG3_PB_pbsv_5449:HG3_Ill_svaba_7211:HG3_Ill_scalpel_5513:HG3_Ill_manta_1295:HG3_Ill_Krunchall_7704:HG3_Ill_GATKHC_9193:HG3_Ill_GATKHCSBGrefine_3731:HG3_Ill_250bpfermikitraw_7428:HG3_Ill_150bpfermikitraw_7244:HG3_10X_allpass_1112:HG2_Ill_svaba_7109:HG2_Ill_scalpel_5423:HG2_Ill_manta_1581:HG2_Ill_SpiralSDKrefine_13312:HG2_Ill_Krunchall_7857:HG2_Ill_GATKHC_9198:HG2_Ill_GATKHCSBGrefine_3853:HG2_Ill_250bpfermikitraw_7706:HG2_Ill_150bpfermikitraw_7194:HG2_10X_allpass_902:HG3_PB_HySA_8553;NumClusterSVs=22;ExactMatchIDs=HG2_10X_allpass_902:HG2_Ill_150bpfermikitraw_7194:HG2_Ill_250bpfermikitraw_7706:HG2_Ill_GATKHCSBGrefine_3853:HG2_Ill_GATKHC_9198:HG2_Ill_Krunchall_7857:HG2_Ill_SpiralSDKrefine_13312:HG2_Ill_manta_1581:HG2_Ill_scalpel_5423:HG2_Ill_svaba_7109:HG3_10X_allpass_1112:HG3_Ill_150bpfermikitraw_7244:HG3_Ill_250bpfermikitraw_7428:HG3_Ill_GATKHCSBGrefine_3731:HG3_Ill_GATKHC_9193:HG3_Ill_Krunchall_7704:HG3_Ill_manta_1295:HG3_Ill_scalpel_5513:HG3_Ill_svaba_7211:HG3_PB_pbsv_5449;NumExactMatchSVs=20;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0123457;PBcalls=3;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-80;DistBack=19722;DistForward=9069;DistMin=9069;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:12037488-12037571;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3083.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:18:1|0:0:16:26:0:./.:0:0:0:0:0/1:23:23:./.:.:.:.:.:.
chr5	12769656	HG2_Ill_manta_1583	TAGTATCACACACTTAGCAAATATTATTAGCATTTACAAATAGGTCCATCTTTTG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4042:HG4_PB_HySA_8304:HG4_PB_pbsv_5645:HG4_Ill_svaba_7240:HG4_Ill_manta_1380:HG4_Ill_Krunchall_8138:HG4_Ill_GATKHC_9308:HG4_Ill_GATKHCSBGrefine_3952:HG4_Ill_Cortex_2883:HG4_Ill_250bpfermikitraw_7762:HG4_Ill_150bpfermikitraw_7430:HG4_CG_vcfBeta_3640:HG2_PB_pbsv_5615:HG2_PB_SVrefine2Falcon2Bionano_2771:HG2_Ill_svaba_7121:HG2_Ill_scalpel_5432:HG2_Ill_manta_1583:HG2_Ill_breakscan11_809:HG2_Ill_SpiralSDKrefine_13321:HG2_Ill_Krunchall_7865:HG2_Ill_GATKHC_9208:HG2_Ill_GATKHCSBGrefine_3858:HG2_Ill_Cortex_6906:HG2_Ill_250bpfermikitraw_7716:HG2_Ill_150bpfermikitraw_7204:HG2_CG_vcfBeta_3242;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4042:HG4_PB_pbsv_5645:HG4_Ill_svaba_7240:HG4_Ill_manta_1380:HG4_Ill_Krunchall_8138:HG4_Ill_GATKHC_9308:HG4_Ill_GATKHCSBGrefine_3952:HG4_Ill_Cortex_2883:HG4_Ill_250bpfermikitraw_7762:HG4_Ill_150bpfermikitraw_7430:HG4_CG_vcfBeta_3640:HG2_PB_pbsv_5615:HG2_PB_SVrefine2Falcon2Bionano_2771:HG2_Ill_svaba_7121:HG2_Ill_scalpel_5432:HG2_Ill_manta_1583:HG2_Ill_breakscan11_809:HG2_Ill_SpiralSDKrefine_13321:HG2_Ill_Krunchall_7865:HG2_Ill_GATKHC_9208:HG2_Ill_GATKHCSBGrefine_3858:HG2_Ill_Cortex_6906:HG2_Ill_250bpfermikitraw_7716:HG2_Ill_150bpfermikitraw_7204:HG2_CG_vcfBeta_3242;NumExactMatchSVs=25;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.018018;PBcalls=4;Illcalls=19;TenXcalls=1;CGcalls=2;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=2;HG2count=15;HG3count=0;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-54;DistBack=25640;DistForward=25717;DistMin=25640;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=5:12769657-12769713;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3084.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:24:./.:33:0:8:21:./.:0:0:0:0:0/1:28:28:./.:.:.:.:.:.
chr5	12967841	HG2_Ill_250bpfermikitraw_7717	TTGTGCTATGCTTTATTGCACTTCTTAGATATTGCATTTTTACTTTAAGTTCTGGGGTACA	T	20	PASS	ClusterIDs=HG2_PB_HySA_10367:HG3_PB_HySA_8561:HG2_PB_pbsv_5616:HG3_PB_assemblyticsfalcon_20964:HG3_PB_pbsv_5452:HG3_PB_SVrefine2Falcon1Dovetail_3490:HG3_Ill_svaba_7218:HG3_Ill_scalpel_5519:HG3_Ill_manta_1297:HG3_Ill_SVrefine2DISCOVARDovetail_4241:HG3_Ill_Krunchall_7709:HG3_Ill_GATKHC_9202:HG3_Ill_GATKHCSBGrefine_3735:HG3_Ill_250bpfermikitraw_7438:HG3_Ill_150bpfermikitraw_7252:HG3_10X_allpass_1116:HG2_PB_assemblyticsfalcon_21022:HG2_Ill_svaba_7123:HG2_Ill_scalpel_5434:HG2_Ill_manta_1584:HG2_Ill_breakscan11_810:HG2_Ill_SpiralSDKrefine_13322:HG2_Ill_Krunchall_7866:HG2_Ill_GATKHC_9209:HG2_Ill_GATKHCSBGrefine_3859:HG2_Ill_250bpfermikitraw_7717:HG2_Ill_150bpfermikitraw_7205:HG2_10X_SVrefine210Xhap12_4043;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4043:HG2_Ill_150bpfermikitraw_7205:HG2_Ill_250bpfermikitraw_7717:HG2_Ill_GATKHCSBGrefine_3859:HG2_Ill_GATKHC_9209:HG2_Ill_Krunchall_7866:HG2_Ill_SpiralSDKrefine_13322:HG2_Ill_breakscan11_810:HG2_Ill_manta_1584:HG2_Ill_scalpel_5434:HG2_Ill_svaba_7123:HG2_PB_assemblyticsfalcon_21022:HG3_10X_allpass_1116:HG3_Ill_150bpfermikitraw_7252:HG3_Ill_250bpfermikitraw_7438:HG3_Ill_GATKHCSBGrefine_3735:HG3_Ill_GATKHC_9202:HG3_Ill_Krunchall_7709:HG3_Ill_SVrefine2DISCOVARDovetail_4241:HG3_Ill_manta_1297:HG3_Ill_scalpel_5519:HG3_Ill_svaba_7218:HG3_PB_SVrefine2Falcon1Dovetail_3490:HG3_PB_pbsv_5452;NumExactMatchSVs=24;ClusterMaxShiftDist=0.333333;ClusterMaxSizeDiff=0.333333;ClusterMaxEditDist=0.333333;PBcalls=7;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=14;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-60;DistBack=8580;DistForward=21255;DistMin=8580;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=5:12967842-12967906;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3085.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:39:./.:11:22:18:14:./.:0:0:0:0:0/1:39:25:./.:.:.:.:.:.
chr5	13855300	HG4_PB_pbsv_5652	TCATAAATCTTACATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4051:HG4_Ill_Krunchall_8151:HG3_Ill_Krunchall_7715:HG2_Ill_Krunchall_7877:HG4_Ill_Spiral_457:HG3_Ill_Spiral_6070:HG3_PB_pbsv_5456:HG2_PB_pbsv_5620:HG4_Ill_MetaSV_4076:HG3_Ill_MetaSV_4092:HG2_Ill_tnscope_625:HG4_PB_pbsv_5652:HG4_PB_SVrefine2PBcRDovetail_2850:HG4_PB_HySA_8311:HG4_Ill_GATKHCSBGrefine_3956:HG4_10X_allpass_1063:HG3_PB_HySA_8568:HG3_Ill_GATKHCSBGrefine_3741:HG3_10X_allpass_1117:HG2_PB_SVrefine2Falcon1plusDovetail_9441:HG2_PB_HySA_10380:HG2_Ill_manta_1585:HG2_Ill_breakscan11_811:HG2_Ill_GATKHCSBGrefine_3862:HG2_10X_allpass_905;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4051:HG4_PB_pbsv_5652:HG4_PB_SVrefine2PBcRDovetail_2850:HG4_PB_HySA_8311:HG4_Ill_GATKHCSBGrefine_3956:HG4_10X_allpass_1063:HG3_PB_HySA_8568:HG3_Ill_GATKHCSBGrefine_3741:HG3_10X_allpass_1117:HG2_PB_SVrefine2Falcon1plusDovetail_9441:HG2_PB_HySA_10380:HG2_Ill_manta_1585:HG2_Ill_breakscan11_811:HG2_Ill_GATKHCSBGrefine_3862:HG2_10X_allpass_905;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00632911;ClusterMaxSizeDiff=0.00632911;ClusterMaxEditDist=0.00634921;PBcalls=8;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=4;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=9358;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:13855301-13855632;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3086.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:26:0|1:33:3:2:18:./.:0:0:0:0:0/1:44:23:0/1:23:5:.:.:.
chr5	13895082	HG4_Ill_manta_1381	GAAAAGAAGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAA	G	20	PASS	ClusterIDs=HG3_Ill_Krunchall_7716:HG3_PB_HySA_8569:HG4_Ill_Krunchall_8152:HG3_Ill_Krunchall_7717:HG2_Ill_Krunchall_7878:HG4_PB_assemblyticsfalcon_20559:HG2_PB_assemblyticsPBcR_20334:HG3_PB_assemblyticsfalcon_20976:HG2_PB_assemblyticsfalcon_21030:HG4_PB_HySA_8312:HG3_Ill_MetaSV_4094:HG2_PB_HySA_10382:HG2_Ill_MetaSV_3908:HG4_PB_pbsv_5653:HG4_Ill_manta_1381:HG4_Ill_GATKHCSBGrefine_3957:HG4_10X_allpass_1064:HG3_PB_pbsv_5457:HG3_Ill_manta_1298:HG3_Ill_GATKHCSBGrefine_3742:HG3_10X_allpass_1118:HG2_PB_pbsv_5621:HG2_Ill_scalpel_5440:HG2_Ill_manta_1586:HG2_Ill_GATKHCSBGrefine_3863:HG2_10X_allpass_906:HG2_Ill_breakscan11_812:HG4_PB_SVrefine2PBcRDovetail_2851:HG4_PB_SVrefine2Falcon1Dovetail_3428:HG4_Ill_SVrefine2DISCOVARDovetail_4148:HG3_PB_SVrefine2PBcRDovetail_2593:HG3_PB_SVrefine2Falcon1Dovetail_3495:HG3_Ill_SVrefine2DISCOVARDovetail_4245:HG2_PB_SVrefine2PBcRplusDovetail_8789:HG2_PB_SVrefine2Falcon2Bionano_2774:HG2_PB_SVrefine2Falcon1plusDovetail_9442:HG2_Ill_tnscope_626:HG2_Ill_SVrefine2DISCOVARplusDovetail_10187:HG2_10X_SVrefine210Xhap12_4052;NumClusterSVs=39;ExactMatchIDs=HG2_10X_allpass_906:HG2_Ill_GATKHCSBGrefine_3863:HG2_Ill_manta_1586:HG2_Ill_scalpel_5440:HG2_PB_pbsv_5621:HG3_10X_allpass_1118:HG3_Ill_GATKHCSBGrefine_3742:HG3_Ill_manta_1298:HG3_PB_pbsv_5457:HG4_10X_allpass_1064:HG4_Ill_GATKHCSBGrefine_3957:HG4_Ill_manta_1381:HG4_PB_pbsv_5653;NumExactMatchSVs=13;ClusterMaxShiftDist=0.109402;ClusterMaxSizeDiff=0.109402;ClusterMaxEditDist=0.136752;PBcalls=17;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-297;DistBack=-406;DistForward=-193;DistMin=-406;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:13895077-13895389;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3087.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:1:32:0:25:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr5	13967797	HG2_PB_SVrefine2PB10Xhap12_4077	GTTCTATATGAATTTTACGATTGCTTTTTCCAATTCTGTGAGGAATGATGGTGGTATTTTGATGGGAATTGCATTGAATTTGTAGATTGCTTTTGGCCACACGGTCATTTTCACAATAATGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4053:HG2_PB_pbsv_5622:HG2_PB_SVrefine2PBcRplusDovetail_8790:HG2_PB_assemblyticsPBcR_20335:HG4_Ill_250bpfermikitraw_7775:HG4_Ill_150bpfermikitraw_7442:HG4_PB_pbsv_5654:HG4_PB_SVrefine2PBcRDovetail_2852:HG4_PB_SVrefine2Falcon1Dovetail_3429:HG4_Ill_SVrefine2DISCOVARDovetail_4149:HG2_PB_SVrefine2PB10Xhap12_4077:HG2_PB_SVrefine2Falcon2Bionano_2775:HG2_Ill_SVrefine2DISCOVARplusDovetail_10188;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4053:HG4_PB_SVrefine2PBcRDovetail_2852:HG4_PB_SVrefine2Falcon1Dovetail_3429:HG4_Ill_SVrefine2DISCOVARDovetail_4149:HG2_PB_SVrefine2PB10Xhap12_4077:HG2_PB_SVrefine2Falcon2Bionano_2775:HG2_Ill_SVrefine2DISCOVARplusDovetail_10188;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0672269;ClusterMaxSizeDiff=0.0666667;ClusterMaxEditDist=0.0840336;PBcalls=8;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-121;DistBack=72586;DistForward=-117;DistMin=-117;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=127;REFWIDENED=5:13967798-13968045;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.9508;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=98;MatchId=3088.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:27:./.:19:10:5:13:./.:0:0:0:0:0/1:31:15:./.:.:.:.:.:.
chr5	15748132	HG3_Ill_250bpfermikitraw_7460	AGGAGTGATTTTGCTCCCCAGGGAACACCTGGAAAAGTCTAGAGGAATTCTGATATAACT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4057:HG4_PB_assemblyticsfalcon_20575:HG4_PB_HySA_8331:HG4_Ill_Spiral_458:HG3_Ill_Spiral_6082:HG2_Ill_Spiral_409:HG2_PB_pbsv_5627:HG3_PB_pbsv_5462:HG4_PB_pbsv_5659:HG3_PB_assemblyticsfalcon_20988:HG3_PB_HySA_8596:HG2_PB_HySA_10406:HG4_PB_SVrefine2PBcRDovetail_2855:HG4_Ill_svaba_7254:HG4_Ill_manta_1382:HG4_Ill_Krunchall_8161:HG4_Ill_GATKHCSBGrefine_3960:HG4_Ill_250bpfermikitraw_7784:HG4_Ill_150bpfermikitraw_7451:HG3_PB_SVrefine2PBcRDovetail_2597:HG3_Ill_svaba_7231:HG3_Ill_scalpel_5529:HG3_Ill_SVrefine2DISCOVARDovetail_4254:HG3_Ill_Krunchall_7725:HG3_Ill_GATKHCSBGrefine_3744:HG3_Ill_250bpfermikitraw_7460:HG3_Ill_150bpfermikitraw_7270:HG2_PB_SVrefine2PBcRplusDovetail_8794:HG2_PB_SVrefine2PB10Xhap12_4079:HG2_PB_SVrefine2Falcon2Bionano_2780:HG2_PB_SVrefine2Falcon1plusDovetail_9448:HG2_Ill_svaba_7141:HG2_Ill_scalpel_5447:HG2_Ill_manta_1587:HG2_Ill_SpiralSDKrefine_13340:HG2_Ill_SVrefine2DISCOVARplusDovetail_10195:HG2_Ill_GATKHCSBGrefine_3867:HG2_Ill_250bpfermikitraw_7742:HG2_Ill_150bpfermikitraw_7224;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4057:HG4_PB_SVrefine2PBcRDovetail_2855:HG4_Ill_svaba_7254:HG4_Ill_manta_1382:HG4_Ill_Krunchall_8161:HG4_Ill_GATKHCSBGrefine_3960:HG4_Ill_250bpfermikitraw_7784:HG4_Ill_150bpfermikitraw_7451:HG3_PB_SVrefine2PBcRDovetail_2597:HG3_Ill_svaba_7231:HG3_Ill_scalpel_5529:HG3_Ill_SVrefine2DISCOVARDovetail_4254:HG3_Ill_Krunchall_7725:HG3_Ill_GATKHCSBGrefine_3744:HG3_Ill_250bpfermikitraw_7460:HG3_Ill_150bpfermikitraw_7270:HG2_PB_SVrefine2PBcRplusDovetail_8794:HG2_PB_SVrefine2PB10Xhap12_4079:HG2_PB_SVrefine2Falcon2Bionano_2780:HG2_PB_SVrefine2Falcon1plusDovetail_9448:HG2_Ill_svaba_7141:HG2_Ill_scalpel_5447:HG2_Ill_manta_1587:HG2_Ill_SpiralSDKrefine_13340:HG2_Ill_SVrefine2DISCOVARplusDovetail_10195:HG2_Ill_GATKHCSBGrefine_3867:HG2_Ill_250bpfermikitraw_7742:HG2_Ill_150bpfermikitraw_7224;NumExactMatchSVs=28;ClusterMaxShiftDist=0.140351;ClusterMaxSizeDiff=0.140351;ClusterMaxEditDist=0.142857;PBcalls=14;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-59;DistBack=1;DistForward=29665;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=61;REFWIDENED=5:15748133-15748252;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3090.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:./.:0:0:0:0:./.:0:0:0:0:1/1:0:43:./.:.:.:.:.:.
chr5	16982923	HG2_Ill_250bpfermikitraw_7756	TATATATAATATATATATATATAATATATATATATAATATATATATATAATATATATATATAATATATATATATAATATATATATATAATATATA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_5632:HG4_Ill_SVrefine2DISCOVARDovetail_4167:HG2_PB_assemblyticsfalcon_21061:HG2_PB_assemblyticsPBcR_20360:HG2_PB_SVrefine2PBcRplusDovetail_8798:HG2_PB_SVrefine2PB10Xhap12_4082:HG2_PB_SVrefine2Falcon1plusDovetail_9452:HG2_Ill_SVrefine2DISCOVARplusDovetail_10202:HG2_10X_SVrefine210Xhap12_4064:HG4_PB_pbsv_5664:HG4_Ill_svaba_7272:HG4_Ill_manta_1386:HG4_Ill_Krunchall_8175:HG4_Ill_GATKHC_9349:HG4_Ill_GATKHCSBGrefine_3970:HG4_Ill_250bpfermikitraw_7799:HG4_Ill_150bpfermikitraw_7466:HG4_10X_allpass_1068:HG2_Ill_svaba_7157:HG2_Ill_manta_1589:HG2_Ill_SpiralSDKrefine_13351:HG2_Ill_Krunchall_7903:HG2_Ill_GATKHC_9246:HG2_Ill_GATKHCSBGrefine_3879:HG2_Ill_250bpfermikitraw_7756:HG2_Ill_150bpfermikitraw_7236:HG2_10X_allpass_908;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_908:HG2_Ill_150bpfermikitraw_7236:HG2_Ill_250bpfermikitraw_7756:HG2_Ill_GATKHCSBGrefine_3879:HG2_Ill_GATKHC_9246:HG2_Ill_Krunchall_7903:HG2_Ill_SpiralSDKrefine_13351:HG2_Ill_manta_1589:HG2_Ill_svaba_7157:HG4_10X_allpass_1068:HG4_Ill_150bpfermikitraw_7466:HG4_Ill_250bpfermikitraw_7799:HG4_Ill_GATKHCSBGrefine_3970:HG4_Ill_GATKHC_9349:HG4_Ill_Krunchall_8175:HG4_Ill_manta_1386:HG4_Ill_svaba_7272;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0430108;ClusterMaxSizeDiff=0.0430108;ClusterMaxEditDist=0.0430108;PBcalls=7;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-94;DistBack=20;DistForward=-89;DistMin=-89;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:16982924-16983017;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3091.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:25:0|1:17:1:2:24:./.:0:0:0:0:0/1:23:18:./.:.:.:.:.:.
chr5	18171827	HG2_Ill_scalpel_5465	AGAGGGGGAAGGAAGGGAGAGGGGGCAAGGGCTAAAAATCTAAATAGGCCCTGGAGACTACTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4070:HG4_PB_HySA_8359:HG4_PB_pbsv_5674:HG2_PB_PB10Xdip_23524:HG2_PB_PB10Xdip_23525:HG4_Ill_svaba_7281:HG4_Ill_scalpel_5349:HG4_Ill_Krunchall_8191:HG4_Ill_GATKHC_9368:HG4_Ill_GATKHCSBGrefine_3976:HG4_Ill_250bpfermikitraw_7812:HG4_Ill_150bpfermikitraw_7478:HG4_10X_allpass_1069:HG2_PB_pbsv_5643:HG2_PB_HySA_10440:HG2_Ill_svaba_7167:HG2_Ill_scalpel_5465:HG2_Ill_manta_1591:HG2_Ill_breakscan11_815:HG2_Ill_SpiralSDKrefine_13360:HG2_Ill_Krunchall_7915:HG2_Ill_GATKHC_9267:HG2_Ill_GATKHCSBGrefine_3888:HG2_Ill_250bpfermikitraw_7770:HG2_Ill_150bpfermikitraw_7247:HG4_Ill_SVrefine2DISCOVARDovetail_4171:HG2_PB_SVrefine2PBcRplusDovetail_8804:HG2_PB_SVrefine2PB10Xhap12_4087:HG2_PB_SVrefine2Falcon2Bionano_2788;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7247:HG2_Ill_250bpfermikitraw_7770:HG2_Ill_GATKHCSBGrefine_3888:HG2_Ill_GATKHC_9267:HG2_Ill_Krunchall_7915:HG2_Ill_SpiralSDKrefine_13360:HG2_Ill_breakscan11_815:HG2_Ill_manta_1591:HG2_Ill_scalpel_5465:HG2_Ill_svaba_7167:HG2_PB_HySA_10440:HG2_PB_PB10Xdip_23525:HG4_Ill_svaba_7281:HG4_Ill_scalpel_5349:HG4_Ill_Krunchall_8191:HG4_Ill_GATKHC_9368:HG4_Ill_GATKHCSBGrefine_3976:HG4_Ill_250bpfermikitraw_7812:HG4_Ill_150bpfermikitraw_7478:HG4_10X_allpass_1069:HG2_PB_pbsv_5643;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0314961;ClusterMaxSizeDiff=0.0314961;ClusterMaxEditDist=0.0952381;PBcalls=9;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=74581;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=64;REFWIDENED=5:18171807-18171932;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3092.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:0|1:28:2:1:27:./.:0:0:0:0:0/1:28:22:./.:.:.:.:.:.
chr5	18873312	HG3_Ill_SVrefine2DISCOVARDovetail_4274	CTTGTGTATTGCTGCTAATCGTTTATTGAATCTGTGCTGGCGTAGTAACTCAGCATCAGGTCCAAGATCTGTTCTCCTGGTGTTGAGTTCCTTAGCTATTTATTTGCAGTTTGGTACCCAGATTTCAATATTGGTTCCCCTTTATTTAACATCGTTGGTGGAGATGTGCTGTACCTTTCATTCTTTTCTGCTTTTTCTAATTATACCTCTGTTTTGTATTGTGTTGCTTAAATGTACTGATTTTCATAAGAAGAATAGTCACAAGGTAGAACACGGCCATAGCTCCTATAAATCTGGCTTTTGAACAGGCCTCACAAACCAGTATGTTTACAGTTCCTACCAGATCAGCCTTCATCTGGAAATTGTGGTGTGTCACCAATAAAAATAGATAAGATTCTCCTTCCATCTTGATTTTTGTCTCCCAAGAGCTTGGCTTTGATCCAGAGACTGCAATCACAGTCTTCTGTGTTCACAATCCAGAAGACTGCAATCCACAGACTTCTGTGTTCACAAAAGAAAAATATTCAGTAGGGAGCCTGAGGCACAAGCTGCAAAGGCATCATTTTAACCAACTGTTGACATCTTTCTTGGGGTTATCTAATTCTAATTCTTCTCCCAGAAAAAAAACTCCTGTTTGTTATATGAATCCTCTTTAAAATAAAAATTCCTGTCCTTATTTCTCTAAATGGCATCATTTCACCAAAGATGATTTGTGCCTTCAATGGCCCTCCTAGGACACATTTGACTTAAAAAGTATTATTCCTTTTAAGAGGCCTTACCAAATACAGTAAGATTTCTCAGGCTTCATAGAACATTTTCTATTGGTATTCAAAGACCTCTAAACAAAACTCTGATTCAACAATTACTTCTCTAAAAAATAATATGGGAAAAGTTAATGAACCATTTACCAACTAGAAATTAGCAAAATAAGGAAAATAAAGTAGAACTGATTTTATAAAATAGAATATTACCACATGTAAGAAACTTCAAACATTTGTTATATATCAGGAGTAGACTGTAATTATACAATAGCCAAAAGATGGGCTGGGAACCATCAAAGGTTATTTAATGTCATTATTATAGGTAAGGAATTTTATCCTTGTTACCCTTAAAGGCCATTGAAGGGCTATAAGCAGATAGTGTCATGTTAAAGAATGCCCTATAACATTGAAAGAAATATCAAAACTGGGGAATGAATGTTCTTAATTAATGAATGCAAGATTAAATATAAGTTTAGAGTTTGTTGCATGAGAGAGATGAGAGCCAGAGTTGGTAATAAAGATGAGGGTGTGGGAACATACATTTAAGAGATACTACTAAGATGTTATCAAATGAAAGTGAAATAAGGCTGGGTGTGGTGGCTCATGCCTGTAATCCCAGAACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGCCAGCCTGGCCAACATGGCAAAACCCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGTGTGTGCCTGTAGTGCCAGCTACTCAGGAGG	C	20	PASS	ClusterIDs=HG3_PB_pbsv_5481:HG2_PB_PB10Xdip_23653:HG2_10X_allpass_909:HG3_10X_allpass_1122:HG3_PB_assemblyticsfalcon_21025:HG3_PB_SVrefine2PBcRDovetail_2605:HG3_PB_SVrefine2Falcon1Dovetail_3511:HG3_Ill_SVrefine2DISCOVARDovetail_4274:HG2_PB_pbsv_5647:HG2_PB_assemblyticsfalcon_21087:HG2_PB_assemblyticsPBcR_20387:HG2_PB_SVrefine2PBcRplusDovetail_8806:HG2_PB_SVrefine2PB10Xhap12_4090:HG2_PB_SVrefine2Falcon1plusDovetail_9459:HG2_Ill_breakscan11_816:HG2_Ill_SpiralSDKrefine_13365:HG2_Ill_SVrefine2DISCOVARplusDovetail_10209:HG2_Ill_MetaSV_3915:HG2_10X_SVrefine210Xhap12_4072:HG3_Ill_MetaSV_4103:HG2_Ill_tnscope_628;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4072:HG2_Ill_MetaSV_3915:HG2_Ill_SVrefine2DISCOVARplusDovetail_10209:HG2_Ill_SpiralSDKrefine_13365:HG2_Ill_breakscan11_816:HG2_PB_SVrefine2Falcon1plusDovetail_9459:HG2_PB_SVrefine2PB10Xhap12_4090:HG2_PB_SVrefine2PBcRplusDovetail_8806:HG2_PB_assemblyticsPBcR_20387:HG2_PB_assemblyticsfalcon_21087:HG2_PB_pbsv_5647:HG3_Ill_SVrefine2DISCOVARDovetail_4274:HG3_PB_SVrefine2Falcon1Dovetail_3511:HG3_PB_SVrefine2PBcRDovetail_2605:HG3_PB_assemblyticsfalcon_21025;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00521003;ClusterMaxSizeDiff=0.00521003;ClusterMaxEditDist=0.00782524;PBcalls=11;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1535;DistBack=92489;DistForward=-1534;DistMin=-1534;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:18873313-18874847;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3093.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:34:0|1:39:6:2:17:./.:0:0:0:0:0/1:36:10:0/1:110:52:1519:.:.
chr5	19078553	HG4_Ill_MetaSV_4086	GTTTAAAGTCTGTTTTATTGGTTTATCAGATACTACAATTGCAACCCCTGCTTTTTTTTTTTTTTTTTTTTTGCTTTCCATTTGCTAGGTAAATATTCCTCTATATCTTTATTTTGAGACTATGTGTGTCTTTGCACATGAGATGGGCCTCCTGAATACAGCACACTGATGGGCCTTGACTCTTTATTCAATTTGACAGTCTGTGCCTTTTAATTGGGTCATTTGGCCCATTTACATTTAAGGTTAATGTTGTTATGTGTGAATTTGATCCTGCCATTATTATGCTAGCTGGTTATTTTGCCCTTTAGATTATGCAGTTTCTTCATAGCATCGATGGGCTTTACAATTTGGTATGTTTTTGCAGTGGCTGGTATCAGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTGTAGGGCAGGCCTGGTGGTGACAAAATCTCTCGGCATTTTCTTGTCTGTAAAGGATTTTATTTCTCC	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_7925:HG2_PB_SVrefine2PB10Xhap12_4092:HG2_PB_HySA_10453:HG2_PB_PB10Xdip_23655:HG4_PB_pbsv_5679:HG2_PB_assemblyticsfalcon_21089:HG2_PB_assemblyticsPBcR_20389:HG2_Ill_tnscope_629:HG2_Ill_MetaSV_3917:HG4_Ill_SVrefine2DISCOVARDovetail_4173:HG4_Ill_MetaSV_4086:HG4_Ill_GATKHCSBGrefine_3980:HG4_10X_allpass_1070:HG2_PB_SVrefine2PBcRplusDovetail_8807:HG2_PB_SVrefine2PB10Xhap12_4091:HG2_PB_SVrefine2Falcon1plusDovetail_9460:HG2_Ill_SpiralSDKrefine_13366:HG2_Ill_SVrefine2DISCOVARplusDovetail_10210:HG2_Ill_GATKHCSBGrefine_3891:HG2_10X_allpass_910:HG2_10X_SVrefine210Xhap12_4073:HG2_PB_pbsv_5648:HG4_Ill_Krunchall_8201;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4073:HG2_10X_allpass_910:HG2_Ill_GATKHCSBGrefine_3891:HG2_Ill_SVrefine2DISCOVARplusDovetail_10210:HG2_Ill_SpiralSDKrefine_13366:HG2_PB_SVrefine2Falcon1plusDovetail_9460:HG2_PB_SVrefine2PB10Xhap12_4091:HG2_PB_SVrefine2PBcRplusDovetail_8807:HG4_10X_allpass_1070:HG4_Ill_GATKHCSBGrefine_3980:HG4_Ill_MetaSV_4086:HG4_Ill_SVrefine2DISCOVARDovetail_4173;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0186335;ClusterMaxSizeDiff=0.0186335;ClusterMaxEditDist=0.101449;PBcalls=10;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-483;DistBack=-484;DistForward=-434;DistMin=-484;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:19078554-19079038;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3094.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:33:./.:7:14:11:3:./.:0:0:0:0:0/1:32:22:0/1:52:15:.:.:.
chr5	19466356	HG2_Ill_250bpfermikitraw_7783	CAAGTAGCTGGGATTACAGGCGTGCACCACCAAAGTAGCTGGGATTACAGGCGTGCACCACCA	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_410:HG3_PB_pbsv_5483:HG2_PB_pbsv_5650:HG3_Ill_svaba_7263:HG3_Ill_Krunchall_7757:HG3_Ill_GATKHCSBGrefine_3759:HG3_Ill_250bpfermikitraw_7493:HG3_Ill_150bpfermikitraw_7296:HG2_PB_assemblyticsPBcR_20393:HG2_Ill_svaba_7181:HG2_Ill_SpiralSDKrefine_13370:HG2_Ill_Krunchall_7929:HG2_Ill_GATKHCSBGrefine_3897:HG2_Ill_250bpfermikitraw_7783:HG3_Ill_Spiral_6103;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7783:HG2_Ill_GATKHCSBGrefine_3897:HG2_Ill_Krunchall_7929:HG2_Ill_SpiralSDKrefine_13370:HG2_Ill_svaba_7181:HG2_PB_assemblyticsPBcR_20393:HG3_Ill_150bpfermikitraw_7296:HG3_Ill_250bpfermikitraw_7493:HG3_Ill_GATKHCSBGrefine_3759:HG3_Ill_Krunchall_7757:HG3_Ill_svaba_7263;NumExactMatchSVs=11;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.0322581;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=45966;DistForward=9;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=62;REFWIDENED=5:19466357-19466480;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3095.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:49:./.:31:15:6:31:./.:0:0:0:0:0/1:23:15:./.:.:.:.:.:.
chr5	20990983	HG2_Ill_manta_1595	ACCTGGTTCAGAGCACTCAATTGCCTGGTTTGGCAGCCTGAACCTCCCCACCCTTCTTGGTTATAGATAATGTTGCAGCAGAGCTCTCTCCACTCCATTCCCTGGAAGATCCCCAGCCATTTGGAGTATCCACTCACCTGGATCAGCAGTCTGACATGCCTCACCTTTCCTGGACATAGACTGTGGTTCAGCGAGACCC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_5655:HG2_PB_HySA_10482:HG2_PB_SVrefine2PB10Xhap12_4097:HG2_PB_assemblyticsPBcR_20406:HG4_Ill_MetaSV_4089:HG4_PB_pbsv_5686:HG4_PB_SVrefine2Falcon1Dovetail_3449:HG4_Ill_svaba_7310:HG4_Ill_scalpel_5371:HG4_Ill_GATKHCSBGrefine_3989:HG4_Ill_Cortex_2891:HG4_10X_allpass_1072:HG2_PB_SVrefine2PBcRplusDovetail_8810:HG2_PB_SVrefine2Falcon1plusDovetail_9465:HG2_Ill_svaba_7197:HG2_Ill_manta_1595:HG2_Ill_breakscan11_817:HG2_Ill_SpiralSDKrefine_13387:HG2_Ill_MetaSV_3919:HG2_Ill_GATKHCSBGrefine_3902:HG2_Ill_Cortex_6927:HG2_10X_allpass_911:HG2_10X_SVrefine210Xhap12_4076;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4076:HG2_10X_allpass_911:HG2_Ill_Cortex_6927:HG2_Ill_GATKHCSBGrefine_3902:HG2_Ill_MetaSV_3919:HG2_Ill_SpiralSDKrefine_13387:HG2_Ill_breakscan11_817:HG2_Ill_manta_1595:HG2_Ill_svaba_7197:HG2_PB_SVrefine2Falcon1plusDovetail_9465:HG2_PB_SVrefine2PBcRplusDovetail_8810:HG4_10X_allpass_1072:HG4_Ill_Cortex_2891:HG4_Ill_GATKHCSBGrefine_3989:HG4_Ill_scalpel_5371:HG4_Ill_svaba_7310:HG4_PB_SVrefine2Falcon1Dovetail_3449:HG4_PB_pbsv_5686;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0707071;ClusterMaxSizeDiff=0.0707071;ClusterMaxEditDist=0.0707071;PBcalls=8;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-198;DistBack=112859;DistForward=-196;DistMin=-196;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=5:20990984-20991184;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3096.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:26:1|0:1:24:26:0:./.:0:0:0:0:0/1:31:21:./.:.:.:.:.:.
chr5	21651568	HG3_PB_pbsv_5492	AAAAATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCTCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCG	A	20	PASS	ClusterIDs=HG3_PB_HySA_8662:HG2_10X_allpass_912:HG3_Ill_Krunchall_7781:HG2_Ill_Krunchall_7950:HG3_Ill_Spiral_6122:HG4_PB_pbsv_5689:HG2_PB_pbsv_5657:HG4_PB_assemblyticsfalcon_20631:HG3_PB_assemblyticsfalcon_21046:HG4_Ill_scalpel_5380:HG4_Ill_SVrefine2DISCOVARDovetail_4182:HG4_Ill_GATKHCSBGrefine_3997:HG4_10X_allpass_1075:HG3_PB_pbsv_5492:HG3_Ill_SVrefine2DISCOVARDovetail_4284:HG3_Ill_GATKHCSBGrefine_3766:HG3_10X_allpass_1124:HG2_PB_SVrefine2PB10Xhap12_4100:HG2_PB_SVrefine2Falcon2Bionano_2792:HG2_PB_SVrefine2Falcon1plusDovetail_9467:HG2_Ill_SVrefine2DISCOVARplusDovetail_10217:HG2_Ill_GATKHCSBGrefine_3904:HG2_10X_SVrefine210Xhap12_4077:HG4_PB_HySA_8386:HG3_Ill_MetaSV_4108:HG2_Ill_tnscope_630:HG2_Ill_breakscan11_818;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4077:HG2_Ill_GATKHCSBGrefine_3904:HG2_Ill_SVrefine2DISCOVARplusDovetail_10217:HG2_PB_SVrefine2Falcon1plusDovetail_9467:HG2_PB_SVrefine2Falcon2Bionano_2792:HG2_PB_SVrefine2PB10Xhap12_4100:HG3_10X_allpass_1124:HG3_Ill_GATKHCSBGrefine_3766:HG3_Ill_SVrefine2DISCOVARDovetail_4284:HG3_PB_pbsv_5492:HG4_10X_allpass_1075:HG4_Ill_GATKHCSBGrefine_3997:HG4_Ill_SVrefine2DISCOVARDovetail_4182:HG4_Ill_scalpel_5380;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.0634921;ClusterMaxEditDist=0.0700637;PBcalls=10;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-324;DistForward=30048;DistMin=-324;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:21651569-21651906;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3098.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:33:0|1:34:7:2:23:./.:0:0:0:0:0/1:22:25:0/1:31:7:.:.:.
chr5	24074634	HG3_Ill_svaba_7299	TATATATACATATATATGTATATATGTGTGTATATATACATATATACACAC	T	20	PASS	ClusterIDs=HG3_PB_HySA_8682:HG2_PB_assemblyticsfalcon_21128:HG3_PB_assemblyticsfalcon_21066:HG3_Ill_svaba_7299:HG3_Ill_Krunchall_7802:HG3_Ill_GATKHC_9302:HG3_Ill_GATKHCSBGrefine_3772:HG3_Ill_250bpfermikitraw_7530:HG3_Ill_150bpfermikitraw_7342:HG2_Ill_svaba_7222:HG2_Ill_SpiralSDKrefine_13410:HG2_Ill_Krunchall_7981:HG2_Ill_GATKHC_9327:HG2_Ill_GATKHCSBGrefine_3913:HG2_Ill_250bpfermikitraw_7829:HG2_Ill_150bpfermikitraw_7308;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7308:HG2_Ill_250bpfermikitraw_7829:HG2_Ill_GATKHCSBGrefine_3913:HG2_Ill_GATKHC_9327:HG2_Ill_Krunchall_7981:HG2_Ill_SpiralSDKrefine_13410:HG2_Ill_svaba_7222:HG3_Ill_150bpfermikitraw_7342:HG3_Ill_250bpfermikitraw_7530:HG3_Ill_GATKHCSBGrefine_3772:HG3_Ill_GATKHC_9302:HG3_Ill_Krunchall_7802:HG3_Ill_svaba_7299:HG3_PB_assemblyticsfalcon_21066;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0576923;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=-13;DistForward=1639;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=5:24074633-24074722;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3099.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:34:0|1:40:11:2:20:./.:0:0:0:0:0/1:27:18:./.:.:.:.:.:.
chr5	24091607	HG3_Ill_manta_1308	TAAGAAAACTGAGGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_8683:HG2_PB_HySA_10513:HG4_Ill_Krunchall_8259:HG3_Ill_Krunchall_7804:HG2_Ill_Krunchall_7983:HG4_PB_assemblyticsfalcon_20648:HG3_PB_assemblyticsfalcon_21068:HG2_PB_assemblyticsfalcon_21129:HG2_PB_assemblyticsPBcR_20428:HG4_PB_pbsv_5701:HG3_PB_pbsv_5501:HG4_PB_HySA_8406:HG4_Ill_MetaSV_4097:HG3_Ill_MetaSV_4111:HG2_Ill_tnscope_631:HG4_PB_SVrefine2Falcon1Dovetail_3454:HG4_Ill_scalpel_5401:HG4_Ill_manta_1396:HG4_Ill_GATKHCSBGrefine_4003:HG4_10X_allpass_1078:HG3_PB_SVrefine2PBcRDovetail_2614:HG3_PB_SVrefine2Falcon1Dovetail_3518:HG3_Ill_manta_1308:HG3_Ill_GATKHCSBGrefine_3773:HG3_10X_allpass_1126:HG2_PB_pbsv_5667:HG2_PB_SVrefine2PBcRplusDovetail_8820:HG2_PB_SVrefine2PB10Xhap12_4105:HG2_PB_SVrefine2Falcon2Bionano_2795:HG2_Ill_scalpel_5503:HG2_Ill_manta_1603:HG2_Ill_GATKHCSBGrefine_3914:HG2_10X_allpass_914:HG2_10X_SVrefine210Xhap12_4086:HG2_Ill_breakscan11_821;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4086:HG2_10X_allpass_914:HG2_Ill_GATKHCSBGrefine_3914:HG2_Ill_manta_1603:HG2_Ill_scalpel_5503:HG2_PB_SVrefine2Falcon2Bionano_2795:HG2_PB_SVrefine2PB10Xhap12_4105:HG2_PB_SVrefine2PBcRplusDovetail_8820:HG2_PB_pbsv_5667:HG3_10X_allpass_1126:HG3_Ill_GATKHCSBGrefine_3773:HG3_Ill_manta_1308:HG3_PB_SVrefine2Falcon1Dovetail_3518:HG3_PB_SVrefine2PBcRDovetail_2614:HG4_10X_allpass_1078:HG4_Ill_GATKHCSBGrefine_4003:HG4_Ill_manta_1396:HG4_Ill_scalpel_5401:HG4_PB_SVrefine2Falcon1Dovetail_3454;NumExactMatchSVs=19;ClusterMaxShiftDist=0.117284;ClusterMaxSizeDiff=0.117284;ClusterMaxEditDist=0.117284;PBcalls=16;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-326;DistForward=-311;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:24091608-24091947;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:30:0:26:./.:0:0:0:0:1/1:0:40:./.:1:12:.:.:.
chr5	24271457	HG3_PB_SVrefine2PBcRDovetail_2615	ACTAATAGGATAGATGTGTAAGGGAGTTTACATCTAATAGGATAGATGTGTAAGGGAGTTTACAT	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7312:HG2_PB_HySA_10517:HG2_PB_pbsv_5668:HG3_PB_pbsv_5502:HG4_PB_pbsv_5702:HG4_PB_HySA_8408:HG3_PB_HySA_8686:HG4_PB_SVrefine2Falcon1Dovetail_3455:HG4_Ill_svaba_7338:HG4_Ill_250bpfermikitraw_7879:HG4_Ill_150bpfermikitraw_7544:HG3_PB_SVrefine2PBcRDovetail_2615:HG3_PB_SVrefine2Falcon1Dovetail_3519:HG3_Ill_svaba_7300:HG3_Ill_250bpfermikitraw_7532:HG3_Ill_150bpfermikitraw_7346:HG2_PB_SVrefine2PBcRplusDovetail_8821:HG2_PB_SVrefine2PB10Xhap12_4106:HG2_PB_SVrefine2Falcon2Bionano_2796:HG2_Ill_svaba_7224:HG2_Ill_SpiralSDKrefine_13411:HG2_Ill_SVrefine2DISCOVARplusDovetail_10224:HG2_Ill_250bpfermikitraw_7831;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7312:HG4_PB_SVrefine2Falcon1Dovetail_3455:HG4_Ill_svaba_7338:HG4_Ill_250bpfermikitraw_7879:HG4_Ill_150bpfermikitraw_7544:HG3_PB_SVrefine2PBcRDovetail_2615:HG3_PB_SVrefine2Falcon1Dovetail_3519:HG3_Ill_svaba_7300:HG3_Ill_250bpfermikitraw_7532:HG3_Ill_150bpfermikitraw_7346:HG2_PB_SVrefine2PBcRplusDovetail_8821:HG2_PB_SVrefine2PB10Xhap12_4106:HG2_PB_SVrefine2Falcon2Bionano_2796:HG2_Ill_svaba_7224:HG2_Ill_SpiralSDKrefine_13411:HG2_Ill_SVrefine2DISCOVARplusDovetail_10224:HG2_Ill_250bpfermikitraw_7831;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.03125;PBcalls=12;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-64;DistBack=27581;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=123;REFWIDENED=5:24271458-24271644;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:2:21:1:26:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr5	24370527	HG2_Ill_MetaSV_3926	TTAAAACAAAATTTTTTTTTTTTTTTTTTTTTTTTTTATGGTTTGGTTATTTTATTCTTGAAATAATATTTTTAAATTTAAAAAAATTTAACAGCTTTATTGAGGTGTAACCAGCATACAATAAGTTTCACATATTTAACGTACACAAATTTGATGAGTTTTGACACATGCAAACAGCCATGAAACCATCATAACAATTAAAATAACAAACATTTCCATGTTTGCTTTGTTTTGTTTTGTTTTTTTTTTTTTTTCATGTGTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTTGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACCGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAATAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_632:HG4_Ill_Krunchall_8265:HG3_Ill_Krunchall_7808:HG3_PB_assemblyticsfalcon_21074:HG2_PB_assemblyticsfalcon_21135:HG2_PB_assemblyticsPBcR_20434:HG3_10X_allpass_1127:HG4_PB_assemblyticsfalcon_20655:HG2_10X_allpass_915:HG4_10X_allpass_1079:HG4_PB_pbsv_5704:HG4_PB_SVrefine2Falcon1Dovetail_3456:HG4_Ill_MetaSV_4099:HG4_Ill_GATKHCSBGrefine_4005:HG3_PB_pbsv_5504:HG3_PB_SVrefine2PBcRDovetail_2616:HG3_PB_SVrefine2Falcon1Dovetail_3520:HG3_Ill_MetaSV_4113:HG3_Ill_GATKHCSBGrefine_3775:HG2_PB_pbsv_5670:HG2_PB_SVrefine2PBcRplusDovetail_8822:HG2_PB_SVrefine2PB10Xhap12_4107:HG2_PB_SVrefine2Falcon2Bionano_2797:HG2_Ill_SVrefine2DISCOVARplusDovetail_10225:HG2_Ill_MetaSV_3926:HG2_Ill_GATKHCSBGrefine_3916:HG2_10X_SVrefine210Xhap12_4088;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4088:HG2_Ill_GATKHCSBGrefine_3916:HG2_Ill_MetaSV_3926:HG2_Ill_SVrefine2DISCOVARplusDovetail_10225:HG2_PB_SVrefine2Falcon2Bionano_2797:HG2_PB_SVrefine2PB10Xhap12_4107:HG2_PB_SVrefine2PBcRplusDovetail_8822:HG2_PB_pbsv_5670:HG3_Ill_GATKHCSBGrefine_3775:HG3_Ill_MetaSV_4113:HG3_PB_SVrefine2Falcon1Dovetail_3520:HG3_PB_SVrefine2PBcRDovetail_2616:HG3_PB_pbsv_5504:HG4_Ill_GATKHCSBGrefine_4005:HG4_Ill_MetaSV_4099:HG4_PB_SVrefine2Falcon1Dovetail_3456:HG4_PB_pbsv_5704;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00999139;ClusterMaxSizeDiff=0.00999139;ClusterMaxEditDist=0.00999139;PBcalls=13;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2909;DistBack=11182;DistForward=-2057;DistMin=-2057;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:24370528-24373451;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3102.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:9:97:./.:0:4:0:8:./.:0:0:0:0:1/1:0:46:1/1:3:210:2957:.:.
chr5	24452839	HG4_10X_allpass_1080	TAAGAAAACAATAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_414:HG2_10X_allpass_916:HG4_Ill_Krunchall_8267:HG3_Ill_Krunchall_7811:HG2_PB_pbsv_5671:HG2_Ill_Krunchall_7990:HG4_PB_assemblyticsfalcon_20657:HG3_PB_assemblyticsfalcon_21076:HG2_PB_assemblyticsfalcon_21137:HG2_PB_assemblyticsPBcR_20436:HG2_PB_HySA_10524:HG4_PB_HySA_8412:HG4_Ill_MetaSV_4100:HG3_Ill_MetaSV_4115:HG2_Ill_tnscope_633:HG2_Ill_MetaSV_3927:HG4_PB_pbsv_5705:HG4_PB_SVrefine2Falcon1Dovetail_3457:HG4_Ill_manta_1398:HG4_Ill_GATKHCSBGrefine_4006:HG4_10X_allpass_1080:HG3_PB_pbsv_5505:HG3_PB_SVrefine2PBcRDovetail_2617:HG3_PB_SVrefine2Falcon1Dovetail_3521:HG3_Ill_manta_1310:HG3_Ill_GATKHCSBGrefine_3776:HG3_10X_allpass_1128:HG2_PB_SVrefine2PBcRplusDovetail_8823:HG2_PB_SVrefine2PB10Xhap12_4108:HG2_PB_SVrefine2Falcon2Bionano_2798:HG2_Ill_manta_1605:HG2_Ill_SVrefine2DISCOVARplusDovetail_10226:HG2_Ill_GATKHCSBGrefine_3917:HG2_10X_SVrefine210Xhap12_4090:HG2_Ill_breakscan11_822:HG4_Ill_Spiral_463;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4090:HG2_Ill_GATKHCSBGrefine_3917:HG2_Ill_SVrefine2DISCOVARplusDovetail_10226:HG2_Ill_manta_1605:HG2_PB_SVrefine2Falcon2Bionano_2798:HG2_PB_SVrefine2PB10Xhap12_4108:HG2_PB_SVrefine2PBcRplusDovetail_8823:HG3_10X_allpass_1128:HG3_Ill_GATKHCSBGrefine_3776:HG3_Ill_manta_1310:HG3_PB_SVrefine2Falcon1Dovetail_3521:HG3_PB_SVrefine2PBcRDovetail_2617:HG3_PB_pbsv_5505:HG4_10X_allpass_1080:HG4_Ill_GATKHCSBGrefine_4006:HG4_Ill_manta_1398:HG4_PB_SVrefine2Falcon1Dovetail_3457:HG4_PB_pbsv_5705;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0788644;ClusterMaxSizeDiff=0.0788644;ClusterMaxEditDist=0.0788644;PBcalls=15;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=2945;DistForward=101025;DistMin=2945;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:24452840-24453174;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:78:./.:0:0:0:0:./.:0:0:0:0:1/1:0:36:1/1:1:12:.:.:.
chr5	25777306	HG3_Ill_GATKHCSBGrefine_3778	TTTTTCCCAGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3928:HG4_PB_assemblyticsfalcon_20664:HG3_PB_assemblyticsfalcon_21084:HG2_PB_assemblyticsfalcon_21141:HG2_PB_assemblyticsPBcR_20440:HG2_10X_allpass_917:HG4_Ill_Krunchall_8273:HG3_Ill_Krunchall_7816:HG4_Ill_Spiral_464:HG3_Ill_Spiral_6150:HG2_PB_HySA_10532:HG3_PB_pbsv_5507:HG4_PB_pbsv_5709:HG4_PB_SVrefine2Falcon1Dovetail_3460:HG4_PB_HySA_8421:HG4_Ill_svaba_7345:HG4_Ill_scalpel_5411:HG4_Ill_manta_1400:HG4_Ill_GATKHCSBGrefine_4009:HG4_10X_allpass_1082:HG3_PB_SVrefine2Falcon1Dovetail_3523:HG3_Ill_svaba_7307:HG3_Ill_scalpel_5587:HG3_Ill_manta_1311:HG3_Ill_GATKHCSBGrefine_3778:HG2_PB_pbsv_5674:HG2_PB_SVrefine2PBcRplusDovetail_8825:HG2_PB_SVrefine2PB10Xhap12_4109:HG2_PB_SVrefine2Falcon2Bionano_2799:HG2_Ill_svaba_7230:HG2_Ill_scalpel_5512:HG2_Ill_manta_1607:HG2_Ill_breakscan11_823:HG2_Ill_GATKHCSBGrefine_3920:HG2_10X_SVrefine210Xhap12_4095:HG4_Ill_MetaSV_4102:HG3_PB_HySA_8696:HG3_Ill_MetaSV_4116:HG2_Ill_tnscope_634;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4095:HG2_Ill_GATKHCSBGrefine_3920:HG2_Ill_breakscan11_823:HG2_Ill_manta_1607:HG2_Ill_scalpel_5512:HG2_Ill_svaba_7230:HG2_PB_SVrefine2Falcon2Bionano_2799:HG2_PB_SVrefine2PB10Xhap12_4109:HG2_PB_SVrefine2PBcRplusDovetail_8825:HG2_PB_pbsv_5674:HG3_Ill_GATKHCSBGrefine_3778:HG3_Ill_manta_1311:HG3_Ill_scalpel_5587:HG3_Ill_svaba_7307:HG3_PB_SVrefine2Falcon1Dovetail_3523:HG4_10X_allpass_1082:HG4_Ill_GATKHCSBGrefine_4009:HG4_Ill_manta_1400:HG4_Ill_scalpel_5411:HG4_Ill_svaba_7345:HG4_PB_HySA_8421:HG4_PB_SVrefine2Falcon1Dovetail_3460:HG4_PB_pbsv_5709;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0917722;ClusterMaxSizeDiff=0.0917722;ClusterMaxEditDist=0.0917722;PBcalls=15;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=-321;DistForward=16369;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:25777307-25777645;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3104.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:1/1:1:39:0:22:./.:0:0:0:0:1/1:0:58:./.:1:10:.:.:.
chr5	26111186	HG2_10X_allpass_918	TAAAACAATACATTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGTCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_8699:HG4_PB_assemblyticsfalcon_20668:HG3_PB_assemblyticsfalcon_21089:HG2_PB_assemblyticsfalcon_21147:HG2_PB_assemblyticsPBcR_20445:HG2_PB_HySA_10536:HG4_PB_pbsv_5711:HG4_Ill_Krunchall_8276:HG3_Ill_Krunchall_7819:HG2_PB_pbsv_5676:HG3_PB_pbsv_5509:HG4_Ill_MetaSV_4104:HG3_Ill_MetaSV_4117:HG2_Ill_tnscope_635:HG2_Ill_MetaSV_3930:HG4_PB_SVrefine2Falcon1Dovetail_3462:HG4_Ill_svaba_7347:HG4_Ill_scalpel_5415:HG4_Ill_manta_1401:HG4_Ill_GATKHCSBGrefine_4010:HG4_10X_allpass_1083:HG3_PB_SVrefine2PBcRDovetail_2620:HG3_PB_SVrefine2Falcon1Dovetail_3525:HG3_Ill_svaba_7309:HG3_Ill_scalpel_5591:HG3_Ill_manta_1312:HG3_Ill_GATKHCSBGrefine_3779:HG3_10X_allpass_1130:HG2_PB_SVrefine2PBcRplusDovetail_8827:HG2_PB_SVrefine2PB10Xhap12_4111:HG2_PB_SVrefine2Falcon2Bionano_2801:HG2_Ill_svaba_7232:HG2_Ill_scalpel_5516:HG2_Ill_manta_1609:HG2_Ill_GATKHCSBGrefine_3921:HG2_10X_allpass_918:HG2_10X_SVrefine210Xhap12_4098:HG2_Ill_breakscan11_824;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4098:HG2_10X_allpass_918:HG2_Ill_GATKHCSBGrefine_3921:HG2_Ill_manta_1609:HG2_Ill_scalpel_5516:HG2_Ill_svaba_7232:HG2_PB_SVrefine2Falcon2Bionano_2801:HG2_PB_SVrefine2PB10Xhap12_4111:HG2_PB_SVrefine2PBcRplusDovetail_8827:HG3_10X_allpass_1130:HG3_Ill_GATKHCSBGrefine_3779:HG3_Ill_manta_1312:HG3_Ill_scalpel_5591:HG3_Ill_svaba_7309:HG3_PB_SVrefine2Falcon1Dovetail_3525:HG3_PB_SVrefine2PBcRDovetail_2620:HG4_10X_allpass_1083:HG4_Ill_GATKHCSBGrefine_4010:HG4_Ill_manta_1401:HG4_Ill_scalpel_5415:HG4_Ill_svaba_7347:HG4_PB_SVrefine2Falcon1Dovetail_3462;NumExactMatchSVs=22;ClusterMaxShiftDist=0.103448;ClusterMaxSizeDiff=0.103448;ClusterMaxEditDist=0.103448;PBcalls=15;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=3970;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:26111187-26111529;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3105.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:71:1/1:1:26:0:36:./.:0:0:0:0:1/1:0:33:0/1:3:13:.:.:.
chr5	26186255	HG2_Ill_150bpfermikitraw_7327	TGAGTTCTCTCAGTTTTTATTGATTATTATTTTCATTATTTCAGCAAAAAGGAATGTAGTA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_5714:HG4_Ill_svaba_7349:HG3_PB_HySA_8702:HG4_PB_HySA_8427:HG2_PB_assemblyticsPBcR_20446:HG4_Ill_scalpel_5416:HG4_Ill_Krunchall_8278:HG4_Ill_GATKHC_9467:HG4_Ill_GATKHCSBGrefine_4014:HG4_Ill_250bpfermikitraw_7891:HG4_CG_vcfBeta_3694:HG3_Ill_svaba_7311:HG3_Ill_scalpel_5592:HG3_Ill_Krunchall_7822:HG3_Ill_GATKHC_9323:HG3_Ill_GATKHCSBGrefine_3783:HG3_Ill_250bpfermikitraw_7545:HG3_Ill_150bpfermikitraw_7360:HG3_CG_vcfBeta_3165:HG3_10X_allpass_1131:HG2_Ill_svaba_7234:HG2_Ill_scalpel_5517:HG2_Ill_SpiralSDKrefine_13422:HG2_Ill_Krunchall_8000:HG2_Ill_GATKHC_9350:HG2_Ill_GATKHCSBGrefine_3925:HG2_Ill_250bpfermikitraw_7846:HG2_Ill_150bpfermikitraw_7327:HG2_CG_vcfBeta_3286:HG2_10X_allpass_920:HG2_PB_pbsv_5679:HG3_PB_pbsv_5512;NumClusterSVs=32;ExactMatchIDs=HG2_10X_allpass_920:HG2_CG_vcfBeta_3286:HG2_Ill_150bpfermikitraw_7327:HG2_Ill_250bpfermikitraw_7846:HG2_Ill_GATKHCSBGrefine_3925:HG2_Ill_GATKHC_9350:HG2_Ill_Krunchall_8000:HG2_Ill_SpiralSDKrefine_13422:HG2_Ill_scalpel_5517:HG2_Ill_svaba_7234:HG3_10X_allpass_1131:HG3_CG_vcfBeta_3165:HG3_Ill_150bpfermikitraw_7360:HG3_Ill_250bpfermikitraw_7545:HG3_Ill_GATKHCSBGrefine_3783:HG3_Ill_GATKHC_9323:HG3_Ill_Krunchall_7822:HG3_Ill_scalpel_5592:HG3_Ill_svaba_7311:HG4_CG_vcfBeta_3694:HG4_Ill_250bpfermikitraw_7891:HG4_Ill_GATKHCSBGrefine_4014:HG4_Ill_GATKHC_9467:HG4_Ill_Krunchall_8278:HG4_Ill_scalpel_5416:HG4_Ill_svaba_7349;NumExactMatchSVs=26;ClusterMaxShiftDist=0.159292;ClusterMaxSizeDiff=0.159292;ClusterMaxEditDist=0.214286;PBcalls=6;Illcalls=21;TenXcalls=2;CGcalls=3;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=2;CGexactcalls=3;HG2count=12;HG3count=11;HG4count=9;NumTechs=4;NumTechsExact=3;SVLEN=-60;DistBack=24298;DistForward=17956;DistMin=17956;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:26186254-26186317;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3106.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:45:0|1:32:1:5:42:./.:0:0:0:0:0/1:28:33:./.:.:.:.:.:.
chr5	26228775	HG2_Ill_scalpel_5518	CCTCTTAAATGCCAGCTCCCATCCACAGCCCACAGTGCCCAGCATGGCCCTGCCCTCTGCCCTGGCCTATGGTCTCCT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7328:HG2_PB_pbsv_5681:HG3_PB_assemblyticsfalcon_21093:HG3_Ill_GATKHC_9325:HG3_Ill_GATKHCSBGrefine_3786:HG2_Ill_GATKHC_9352:HG2_Ill_GATKHCSBGrefine_3928:HG4_PB_pbsv_5716:HG2_PB_assemblyticsPBcR_20448:HG3_PB_pbsv_5514:HG4_Ill_svaba_7350:HG4_Ill_scalpel_5417:HG4_Ill_Krunchall_8279:HG4_Ill_GATKHC_9468:HG4_Ill_GATKHCSBGrefine_4015:HG4_Ill_250bpfermikitraw_7892:HG4_Ill_150bpfermikitraw_7559:HG3_Ill_svaba_7312:HG3_Ill_scalpel_5593:HG3_Ill_GATKHC_9324:HG3_Ill_GATKHCSBGrefine_3785:HG3_Ill_150bpfermikitraw_7361:HG2_PB_assemblyticsfalcon_21149:HG2_Ill_svaba_7235:HG2_Ill_scalpel_5518:HG2_Ill_breakscan11_825:HG2_Ill_Krunchall_8001:HG2_Ill_GATKHC_9351:HG2_Ill_GATKHCSBGrefine_3927:HG2_Ill_250bpfermikitraw_7847;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7328:HG4_Ill_svaba_7350:HG4_Ill_scalpel_5417:HG4_Ill_Krunchall_8279:HG4_Ill_GATKHC_9468:HG4_Ill_GATKHCSBGrefine_4015:HG4_Ill_250bpfermikitraw_7892:HG4_Ill_150bpfermikitraw_7559:HG3_Ill_svaba_7312:HG3_Ill_scalpel_5593:HG3_Ill_GATKHC_9324:HG3_Ill_GATKHCSBGrefine_3785:HG3_Ill_150bpfermikitraw_7361:HG2_PB_assemblyticsfalcon_21149:HG2_Ill_svaba_7235:HG2_Ill_scalpel_5518:HG2_Ill_breakscan11_825:HG2_Ill_Krunchall_8001:HG2_Ill_GATKHC_9351:HG2_Ill_GATKHCSBGrefine_3927:HG2_Ill_250bpfermikitraw_7847;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0789474;ClusterMaxSizeDiff=0.0789474;ClusterMaxEditDist=0.08;PBcalls=6;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-77;DistBack=24300;DistForward=46;DistMin=46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=209;REFWIDENED=5:26228703-26228988;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3107.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:53:1/1:4:22:1:24:./.:0:0:0:0:1/1:0:22:./.:.:.:.:.:.
chr5	26600717	HG3_Ill_svaba_7315	TATATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4100:HG2_PB_SVrefine2PB10Xhap12_4115:HG3_PB_HySA_8709:HG2_Ill_Krunchall_8005:HG3_PB_pbsv_5518:HG3_PB_SVrefine2PBcRDovetail_2624:HG3_Ill_svaba_7315:HG3_Ill_scalpel_5595:HG3_Ill_manta_1315:HG3_Ill_GATKHC_9330:HG3_Ill_GATKHCSBGrefine_3788:HG3_CG_vcfBeta_3168:HG3_10X_allpass_1133:HG2_PB_pbsv_5685:HG2_PB_SVrefine2Falcon2Bionano_2806:HG2_Ill_svaba_7238:HG2_Ill_scalpel_5521:HG2_Ill_manta_1613:HG2_Ill_breakscan11_826:HG2_Ill_GATKHC_9355:HG2_Ill_GATKHCSBGrefine_3932:HG2_10X_allpass_922;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4100:HG3_PB_SVrefine2PBcRDovetail_2624:HG3_Ill_svaba_7315:HG3_Ill_scalpel_5595:HG3_Ill_manta_1315:HG3_Ill_GATKHC_9330:HG3_Ill_GATKHCSBGrefine_3788:HG3_CG_vcfBeta_3168:HG3_10X_allpass_1133:HG2_PB_pbsv_5685:HG2_PB_SVrefine2Falcon2Bionano_2806:HG2_Ill_svaba_7238:HG2_Ill_scalpel_5521:HG2_Ill_manta_1613:HG2_Ill_breakscan11_826:HG2_Ill_GATKHC_9355:HG2_Ill_GATKHCSBGrefine_3932:HG2_10X_allpass_922;NumExactMatchSVs=18;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.170404;PBcalls=6;Illcalls=12;TenXcalls=3;CGcalls=1;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=1;HG2count=12;HG3count=10;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-118;DistBack=42631;DistForward=-109;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=5:26600718-26600845;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:0|1:32:3:3:30:./.:0:0:0:0:0/1:19:22:./.:.:.:.:.:.
chr5	26653902	HG3_Ill_svaba_7316	TTTTTTTTGTTTGTTTAATACATTGTTTTGTATTGTTTACAACTATATTGTTTGTTTATTGATTG	T	20	PASS	ClusterIDs=HG2_PB_pbsv_5686:HG2_Ill_SpiralSDKrefine_13425:HG4_Ill_manta_1403:HG4_Ill_Cortex_2899:HG3_Ill_Cortex_2913:HG2_Ill_manta_1614:HG2_Ill_Cortex_6964:HG3_PB_HySA_8710:HG4_Ill_Spiral_465:HG3_Ill_Spiral_6158:HG2_Ill_Spiral_415:HG4_Ill_svaba_7352:HG4_Ill_Krunchall_8282:HG4_Ill_GATKHC_9471:HG4_Ill_GATKHCSBGrefine_4016:HG4_Ill_250bpfermikitraw_7896:HG4_Ill_150bpfermikitraw_7563:HG4_CG_vcfBeta_3695:HG4_10X_allpass_1085:HG3_Ill_svaba_7316:HG3_Ill_scalpel_5596:HG3_Ill_Krunchall_7826:HG3_Ill_GATKHC_9331:HG3_Ill_GATKHCSBGrefine_3789:HG3_Ill_250bpfermikitraw_7551:HG3_Ill_150bpfermikitraw_7365:HG3_10X_allpass_1134:HG2_Ill_svaba_7239:HG2_Ill_scalpel_5522:HG2_Ill_Krunchall_8007:HG2_Ill_GATKHC_9356:HG2_Ill_GATKHCSBGrefine_3933:HG2_Ill_250bpfermikitraw_7853:HG2_Ill_150bpfermikitraw_7332:HG2_10X_allpass_923:HG4_PB_pbsv_5719:HG3_PB_pbsv_5519;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_923:HG2_Ill_150bpfermikitraw_7332:HG2_Ill_250bpfermikitraw_7853:HG2_Ill_GATKHCSBGrefine_3933:HG2_Ill_GATKHC_9356:HG2_Ill_Krunchall_8007:HG2_Ill_scalpel_5522:HG2_Ill_svaba_7239:HG3_10X_allpass_1134:HG3_Ill_150bpfermikitraw_7365:HG3_Ill_250bpfermikitraw_7551:HG3_Ill_GATKHCSBGrefine_3789:HG3_Ill_GATKHC_9331:HG3_Ill_Krunchall_7826:HG3_Ill_scalpel_5596:HG3_Ill_svaba_7316:HG4_10X_allpass_1085:HG4_CG_vcfBeta_3695:HG4_Ill_150bpfermikitraw_7563:HG4_Ill_250bpfermikitraw_7896:HG4_Ill_GATKHCSBGrefine_4016:HG4_Ill_GATKHC_9471:HG4_Ill_Krunchall_8282:HG4_Ill_svaba_7352;NumExactMatchSVs=24;ClusterMaxShiftDist=0.030303;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.0601504;PBcalls=4;Illcalls=29;TenXcalls=3;CGcalls=1;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=1;HG2count=13;HG3count=12;HG4count=12;NumTechs=4;NumTechsExact=3;SVLEN=-64;DistBack=29729;DistForward=-61;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=5:26653903-26653969;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3110.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:33:0|1:17:0:1:32:./.:0:0:0:0:0/1:32:17:./.:.:.:.:.:.
chr5	26796698	HG2_10X_SVrefine210Xhap12_4101	ATTTCACTCTCACTATGATGGCTAAAAAGAAAGTAACAATTGTTAATGAGAAAGTAGAGACATTAGAACACCTGTAGATCCCTAGTTGAAGGTAAAATGCTGCAGTTGCTTTGGAGAATAGTTTTGCAATTTCTCAAAAAATGAAACCTACAGTTACTAATTGACCTGGCAATTTTACCCCTTGGCATATACCCTGGGAAATAAAAATATATTTGCATGAAACTTTTACATATAGCAGCATTATCCTTAATCACCAAAATGTGGAAAAAATACAAAAGTTCATCAACTGTTCAATGGGTAAAATATGGTATAGCCCTACAATGAAATACTATTTTCTAATTTTAAAAGTGAAGTAGGAATACTACATAGTATCAATGTCTACCACAAAGTTAAAACCATTCACAAAGGCCACGCATTTCATGTTTCGGTTCACATAAAATATTTTGCAGACAAAATTCACTGAGAGAGAAAGTTCAGTGGTTGCCAGTGGCTAGAGTTAGTGGGGAATGGAGATTGACTTCTAATGGGTATGTATTTTTGTTGCTGTTGTTGTTTTTACGGTGATAAAGTCTTTCTAAAATTAGATACTGCTATTAGTTGAACAACTTTGTGAATATTGTGAAAACCATTGAATTGTACACTTTAAAAGCTGAAGTTTTTGATATATAAATTACATCTGGTTAATGCTGTTATAATTACTCTTCTGAATTCTAGCATTATATATTATTTTTCACTTTTCTGGAAGTGCATTTAAATGAAGTAATATAGATTATAATCTTTTGTCTGCCTTCTTATATACAAAAAATAACTGCAAGATCCATACATACTGTTGCATATATCATTATTTCATTCTTGTTCTTGCTATGTAATATTCGATTACATAAATATATCAGAAATATTTATCCATAAATTTACAAATGTCTGTCTGGTTTCTAGTCTGGACTAGCATGTGTAAATGCTAGGAAATCATTCTATATATCATTTTGTCACCACATACATTTATTTCTCCTGTGAGAAGATATAAAAGTGCAATTGTTGGAGCATAGGGTAGGCATATGTTTGGATTTATTACACATAATCCGTTGTCAAAAATGGTTAAATAAATATCCTCTCCCACCAACAATGTGTGAAAGTTTCAATTGCATAACACAACACAGTGAAACTGTTTTAAAAAATTGATCTGACACTAGCTTTTGCATTTAATAGATATGATTCAGTTTAAATCTTCTATTTTTGCTATTTATCTCCTTTCTTCTTTTCTTCTTTGTTCTATACTTTTCCTGTTTTTCTGCCTACTTTAAGTTTAGCAATTACATGCAATCTATCCTTTCATATTTTAATTGAATTTCATTTTCTTTGTATATTGAAGTCTAATAGGTGATTAATTAGATAACTCAATGAAGCATTTTAAATAATTAAAGTATTATCATAATAAGGAAGTCATTTATCATGAAAAGCACATTGCAAAGATTTTTCGGTTTGTAAATTTAAATACAAAAATCTGAGATCTGAAGAACTGAATTTCTAAATCTAGCACTATAGTTTCAGTATTGTCATACATTTTATAGATAATCTAGATAAGGCCATAACTTTTAAAGAGAAATATGCAGTCTTTGAAGGAAAATTTTGTTTTATAGGCTACAGTGAGGCAACCGTGGGCCTAAAATTCAAGACTTTTACTGGTCTAATGCCAGAACAACAATGATATTCTATTGACATAACTTATTTATTGCTTCAAAACTATTTTTCTTTCTACTACATGAAATTTCTGACACAGGACAAAGTTACATTGTTACTTTACATTTCTTTTGATTCTTCCATAAAATGCTAGGGGGAAATGAAAAACCTATGGAACATAAAATTTTTTTAAATTTATTACTATTATTCTTTAATATAAAAAAATTAAAATATATCATTCTCTTTTAATTTTATACAAACATCATAATATATACTAATTTTAAAGTTATAAGAATTTGTTTCTAAGTTATCAATTGTTAATAAAAAACTTGGCTGGGTGTGGTGGCTTACGCCTGTAATCCCAGCACTTTTGGAGGCCAAGAGGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATAGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGTCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCTAAAAAAAAAAAAGAAAAAGAAAGAAGAAAAAAATCCTGTATAAATTCTGGTAATGTTCTGGAAGGTCTAGGATGCAATATATCTCTAATAAAAATACCAGGTTATAGGTTTTTTATTCTTAAAATTTACGCTTACATTAAATACAAATAAAAAGTATATCTGAGATTCTAATGCATAAATATCCCATATAAAAAATTTAAAATTGGCTGGGCGTGGTGGCTCACGCCTGTAATCACTTTGGGAGGCTGAGGCAGGCGGATCAACTGAGGTCAGGAGTGAAAAGAGTTCCTTTCACTACGTTGGCCTGGCCGGCATAGTGAAACCCCGTCTCTACTAAACATACAAAAAATTAGCTTGGCTTAGTGGCGCGCACATAATCCCAGCAACTTGGGAGGCTGATGTGGGAAAATCACTTGAACCTGGGACGTGGAAGTTGCAGTGAGCCAAGATCACACCCCTGTACTCCAGCCTGGGCAACAGAGCAAAACTCGGTCTCAGAAAAAATAAATAAATAAGTAAATAAATAAAACTTATTTGTTTCATAGTAAATATAAAGCACTTTCTAAAACCATTGCACATGGTGACCTGGGCAAGGAAATCCACTGTGGTTTCCAACGAACACTCAACCAGGCAATATCAGTTAATTTTACTGATATACCATCCTAGAATATAAATTTATCTAATTGTAATTGTTGGATTTTACCATTATTAAATTACTGTTATACCACTTACGCACTTTGATTACATTATTTTTGCCTGTCTAGAAACAATAAACTTGAATAAAATCAGTATGCAAGGCTTTAAATTGTTTCAAAATTAAAATATTTGTATTATGTTTGTGCAAATTTTCTTAAACGACCATGTACAGCCATCATCATTTTTCCAAAATGTTGTGTGTTGTATGTGTCTATATCTCCCAGCAGAAATTAATGACTGAGATGGAAAGAGGAAGAGAGAGAGAGAGAGAGCGCGAGAGAGAGACAGAGAAATGAAACCATACACCTGCTTGGCTCAGATGAATGATGTAGCATAGATTTGGCTTTGAAATATTTACTTAGAAGATTTATTAAATTACTTCGTGGCATACACACTTGTTTCTTCCATTCGTGTGATTAAGCCGAAACCTACAGCACAGCCTGTCTTATTCAGAGGCAGAGCGCTGTGTGCTGACTATACAAGGCTATTAAGTGACTGGCTCCATTCTCCTTCAGACTGAGGCCAAGGCCTATCCAAATTGCTGAGTTTCCTTGCCTCCAAAGCTTTTTAAGCTTAAAATTTATAATTTCTTTCTAAACGTACTGATTAAAAGTCTCAGGTTTTTTTTTGTTTGTTTCACTTCATATTATTCCAATGCTGATACTTCTTGGACAACACTATTAAACACAGTATTATTTGAAATATAAAAATGGAACATTCCATTTAGCTATGGTGTATAGACTCACTATGAATTAACCTGATGTCAATGATCTCAGATTTTTTTCCAGGCATTTTTGAAGGGATCCTGTAAAAGAGAAATGTGAGATTTCTACTTTACTAGAATATATTTTAAGTAACTGTCAATATTTTCATTATTACATGGTGGTTAACCTAGACAAACCCAGTTAGGGCACATTCTTTCCATCAACACCCAGTTCTGTCACTATCAACCCCTCTTTAGGTCCTTTCTGTGGTCAGAGGAAAAAACATTTGACATTGATGGAATGCTTAAAAACACTTCCAAAAATTCTGAGTTATGTGTTGCTTTCAGCAAGACTCTATAAAGCCTTTATACCAAGACAAGTCTGAGGGTCTTCTGCGCAATACTCCTAAATCTTCATTCTTCTCATCCAGAAGAATATTCTTGCATTGTGGGAAAAAGAAGGCTGTAGTATACGTAAAGTTTCTGATTAAAGTGCCTAAAAACCATGCTTTTGGATCCCACCCTCCATGTCCATTGAAGGGAGTGGTTCCAGGAAAGGAAAGTGAGTTGTCAACGTGCAAAGAACAAAGGAGAGATCTACAGGTAGAATGCAGATAATGTATCTAGAGACTAGCACCCTGTAACAAATCAGACAGCACACATGAAAACAGGCAAAATGCAGACGTCAGGAAGTGGATGCAATAGAGAGTAAAATAATCCCCTCCTATCTTATTTCTGTCTTTTCAGTGATGTATATTTGGAAAGTAATCTTTTCTACAGCCAAAACCTGTTATATTACATAAGGAAGCTTCATGAAGATGATCACATCACAAAATATTTTTGAGGTATATGCCCACAAAGAGTTAGCACAGTCCAAGCCCAGATATATATATATATATAGAAAAGAAAATTTTTTGGCCGGGAGCGGCGGCTCACAGCTGTAATCTCAACACTTTGGCAGGCCAAGGAGTGGGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAGCATGGTGAAACTCTGTCTCTACAAAAAATACAAAAAAATTAGCCAGGCCTGGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGAGTCTGAGGCAGGAGAACCACTTGAACCCGGGAGGCAGAGTTTGCAGTGAGCTGAGATTATGCCATTACACGCCAGCCTGGCAACAAGAGTGAAACTCTGTCTCAAAAAATAAATAAATAAAAATGAAAGAGAAATCTTTTTGTATTAGCTCGTATTTTCACGGAATACTACTTACATTAAAAACATAAAATATCATCGTACAACGTAACATACACTGTGCTAAGAAATACACAGGTTTGAATTTTTCACATGAACTTTAAAAATCATTTTGAAAATGTAAGACATTTCAGACTTTGCTCCAGGAATCACCTAATTCTCTCACACCTGAAGCTTGGCATATTTAATATGTAAGCACCTGGAAAATTTTCTGATTTCAAAAAATTAATTTCTAGAATCTCCAAATGAAAAGATT	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_21156:HG2_10X_allpass_924:HG3_10X_allpass_1136:HG2_Ill_tnscope_636:HG4_PB_SVrefine2Falcon1Dovetail_3465:HG3_PB_pbsv_5523:HG3_PB_SVrefine2PBcRDovetail_2626:HG3_PB_SVrefine2Falcon1Dovetail_3529:HG3_Ill_MetaSV_4119:HG3_Ill_GATKHCSBGrefine_3795:HG2_PB_pbsv_5689:HG2_PB_SVrefine2PBcRplusDovetail_8833:HG2_PB_SVrefine2Falcon1plusDovetail_9471:HG2_Ill_SpiralSDKrefine_13428:HG2_Ill_MetaSV_3932:HG2_10X_SVrefine210Xhap12_4101:HG3_Ill_Krunchall_7831:HG3_Ill_Krunchall_7830;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4101:HG2_Ill_MetaSV_3932:HG2_Ill_SpiralSDKrefine_13428:HG2_PB_SVrefine2Falcon1plusDovetail_9471:HG2_PB_SVrefine2PBcRplusDovetail_8833:HG2_PB_pbsv_5689:HG3_Ill_GATKHCSBGrefine_3795:HG3_Ill_MetaSV_4119:HG3_PB_SVrefine2Falcon1Dovetail_3529:HG3_PB_SVrefine2PBcRDovetail_2626:HG3_PB_pbsv_5523:HG4_PB_SVrefine2Falcon1Dovetail_3465;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0247441;ClusterMaxSizeDiff=0.0243004;ClusterMaxEditDist=0.0477207;PBcalls=8;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-5198;DistBack=1240;DistForward=9950;DistMin=1240;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=5:26796699-26801899;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:75:0|1:54:0:0:30:./.:0:0:0:0:0/1:54:14:0/1:354:170:5074:.:.
chr5	28309317	HG4_Ill_GATKHCSBGrefine_4023	TATTATGTAAATAATTATATGTGTGTATATATAATATTCGTATTATATCTAATATACTTGTAAAATTATATTATTTTATTATATGTAAAATAAGAATGTATTACATTATTTACATGTAATTATTATATGTAACTATTTTACAATTACATATAATAGATACGTGTATATATTATATAC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_5695:HG4_Ill_svaba_7362:HG4_Ill_manta_1404:HG4_Ill_GATKHCSBGrefine_4023:HG4_Ill_Cortex_2902:HG4_10X_allpass_1086:HG2_PB_SVrefine2Falcon2Bionano_2808:HG2_Ill_svaba_7253:HG2_Ill_scalpel_5531:HG2_Ill_manta_1616:HG2_Ill_SpiralSDKrefine_13439:HG2_Ill_GATKHCSBGrefine_3942:HG2_Ill_Cortex_6975:HG2_10X_SVrefine210Xhap12_4103;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4103:HG2_Ill_Cortex_6975:HG2_Ill_GATKHCSBGrefine_3942:HG2_Ill_SpiralSDKrefine_13439:HG2_Ill_manta_1616:HG2_Ill_scalpel_5531:HG2_Ill_svaba_7253:HG2_PB_SVrefine2Falcon2Bionano_2808:HG4_10X_allpass_1086:HG4_Ill_Cortex_2902:HG4_Ill_GATKHCSBGrefine_4023:HG4_Ill_manta_1404:HG4_Ill_svaba_7362;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00566572;ClusterMaxSizeDiff=0.00566572;ClusterMaxEditDist=0.00566572;PBcalls=2;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-176;DistBack=68641;DistForward=13325;DistMin=13325;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:28309318-28309494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:31:1|0:3:26:42:3:./.:0:0:0:0:0/1:57:23:./.:.:.:.:.:.
chr5	28813576	HG2_Ill_GATKHCSBGrefine_3945	ACTGGCTTTTGGTGAGGAAATTAACAATTATCACATTATTAAATAAACACTAAATCTGAAGCCATAACTACACAATTCTATTGAGGAAGAAAATAATTATGCAAATACTTCTGATTTTAAATTTTTTATATAATAAACATACAACTGAAGAAAATAAAATGATGCATTCAAATGAGCTGTTTTTAATACGGAGAAAATTCAAGCTCATCTAAATAGAAATATTGGTGGGATGAAAAAAGTAAGTATGTTGGAGG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_416:HG4_PB_HySA_8449:HG2_PB_HySA_10564:HG3_PB_assemblyticsfalcon_21111:HG3_Ill_Krunchall_7847:HG2_Ill_Krunchall_8032:HG4_PB_assemblyticsfalcon_20693:HG2_PB_assemblyticsfalcon_21174:HG2_PB_assemblyticsPBcR_20471:HG4_PB_pbsv_5726:HG4_PB_SVrefine2Falcon1Dovetail_3467:HG4_Ill_MetaSV_4107:HG4_Ill_GATKHCSBGrefine_4026:HG4_10X_allpass_1087:HG3_PB_pbsv_5528:HG3_PB_SVrefine2Falcon1Dovetail_3531:HG3_Ill_manta_1317:HG3_Ill_MetaSV_4120:HG3_Ill_GATKHCSBGrefine_3801:HG3_10X_allpass_1137:HG2_PB_pbsv_5696:HG2_PB_SVrefine2PBcRplusDovetail_8835:HG2_PB_SVrefine2Falcon2Bionano_2809:HG2_Ill_manta_1617:HG2_Ill_breakscan11_827:HG2_Ill_SpiralSDKrefine_13445:HG2_Ill_GATKHCSBGrefine_3945:HG2_10X_allpass_925:HG2_10X_SVrefine210Xhap12_4107:HG4_Ill_Spiral_466:HG3_Ill_Spiral_6170;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4107:HG2_10X_allpass_925:HG2_Ill_GATKHCSBGrefine_3945:HG2_Ill_SpiralSDKrefine_13445:HG2_Ill_breakscan11_827:HG2_Ill_manta_1617:HG2_PB_SVrefine2Falcon2Bionano_2809:HG2_PB_SVrefine2PBcRplusDovetail_8835:HG2_PB_pbsv_5696:HG3_10X_allpass_1137:HG3_Ill_GATKHCSBGrefine_3801:HG3_Ill_MetaSV_4120:HG3_Ill_manta_1317:HG3_PB_SVrefine2Falcon1Dovetail_3531:HG3_PB_pbsv_5528:HG4_10X_allpass_1087:HG4_Ill_GATKHCSBGrefine_4026:HG4_Ill_MetaSV_4107:HG4_PB_SVrefine2Falcon1Dovetail_3467:HG4_PB_pbsv_5726;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0197628;ClusterMaxSizeDiff=0.0197628;ClusterMaxEditDist=0.019802;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-253;DistBack=-406;DistForward=4651;DistMin=-406;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=5:28813577-28813832;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:39:./.:29:12:3:23:./.:0:0:0:0:0/1:55:18:./.:.:.:.:.:.
chr5	29868965	HG3_Ill_GATKHC_9376	TGATAGATAGATAGATAGATAGATAGATAGATAGATAGATCGATAGATACATAGATAGATACATGATAGATA	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3535:HG3_PB_HySA_8743:HG2_PB_PB10Xdip_23728:HG3_Ill_svaba_7350:HG3_Ill_manta_1319:HG3_Ill_Krunchall_7859:HG3_Ill_GATKHC_9376:HG3_Ill_GATKHCSBGrefine_3806:HG3_Ill_250bpfermikitraw_7582:HG3_Ill_150bpfermikitraw_7406:HG2_Ill_svaba_7274:HG2_Ill_SpiralSDKrefine_13452:HG2_Ill_Krunchall_8040:HG2_Ill_GATKHC_9400:HG2_Ill_GATKHCSBGrefine_3949:HG2_Ill_250bpfermikitraw_7888:HG2_PB_pbsv_5702:HG3_PB_pbsv_5532:HG4_PB_SVrefine2Falcon1Dovetail_3470;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7888:HG2_Ill_GATKHCSBGrefine_3949:HG2_Ill_GATKHC_9400:HG2_Ill_Krunchall_8040:HG2_Ill_SpiralSDKrefine_13452:HG2_Ill_svaba_7274:HG3_Ill_150bpfermikitraw_7406:HG3_Ill_250bpfermikitraw_7582:HG3_Ill_GATKHCSBGrefine_3806:HG3_Ill_GATKHC_9376:HG3_Ill_Krunchall_7859:HG3_Ill_manta_1319:HG3_Ill_svaba_7350;NumExactMatchSVs=13;ClusterMaxShiftDist=0.188406;ClusterMaxSizeDiff=0.188406;ClusterMaxEditDist=0.202899;PBcalls=6;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-71;DistBack=5154;DistForward=-52;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=68;REFWIDENED=5:29868946-29869084;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3114.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:38:0|1:42:1:2:36:./.:0:0:0:0:0/1:21:25:./.:.:.:.:.:.
chr5	30518175	HG3_Ill_150bpfermikitraw_7412	TTATATATGGGTATAAAACTTTTGGAAAATTAATCAGTAATAGAACTCAACCTTGAAAATCAAACAGCATATATATATATATATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4111:HG4_Ill_Spiral_467:HG3_PB_HySA_8748:HG3_Ill_Spiral_6182:HG2_PB_HySA_10576:HG2_Ill_Spiral_417:HG4_PB_pbsv_5733:HG3_PB_pbsv_5533:HG2_PB_pbsv_5703:HG4_Ill_svaba_7386:HG4_Ill_scalpel_5445:HG4_Ill_manta_1406:HG4_Ill_Krunchall_8317:HG4_Ill_GATKHCSBGrefine_4031:HG4_Ill_250bpfermikitraw_7931:HG4_Ill_150bpfermikitraw_7602:HG3_Ill_svaba_7353:HG3_Ill_scalpel_5624:HG3_Ill_manta_1320:HG3_Ill_Krunchall_7863:HG3_Ill_GATKHCSBGrefine_3807:HG3_Ill_250bpfermikitraw_7586:HG3_Ill_150bpfermikitraw_7412:HG3_10X_allpass_1139:HG2_Ill_svaba_7278:HG2_Ill_scalpel_5552:HG2_Ill_manta_1620:HG2_Ill_SpiralSDKrefine_13455:HG2_Ill_Krunchall_8046:HG2_Ill_GATKHCSBGrefine_3950:HG2_Ill_250bpfermikitraw_7892:HG2_Ill_150bpfermikitraw_7373:HG2_PB_assemblyticsPBcR_20480:HG4_PB_HySA_8457:HG4_PB_SVrefine2Falcon1Dovetail_3471:HG3_PB_SVrefine2Falcon1Dovetail_3536:HG2_Ill_SVrefine2DISCOVARplusDovetail_10229;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7373:HG2_Ill_250bpfermikitraw_7892:HG2_Ill_GATKHCSBGrefine_3950:HG2_Ill_Krunchall_8046:HG2_Ill_SpiralSDKrefine_13455:HG2_Ill_manta_1620:HG2_Ill_scalpel_5552:HG2_Ill_svaba_7278:HG3_10X_allpass_1139:HG3_Ill_150bpfermikitraw_7412:HG3_Ill_250bpfermikitraw_7586:HG3_Ill_GATKHCSBGrefine_3807:HG3_Ill_Krunchall_7863:HG3_Ill_manta_1320:HG3_Ill_scalpel_5624:HG3_Ill_svaba_7353:HG4_Ill_150bpfermikitraw_7602:HG4_Ill_250bpfermikitraw_7931:HG4_Ill_GATKHCSBGrefine_4031:HG4_Ill_Krunchall_8317:HG4_Ill_manta_1406:HG4_Ill_scalpel_5445:HG4_Ill_svaba_7386;NumExactMatchSVs=23;ClusterMaxShiftDist=0.035503;ClusterMaxSizeDiff=0.035503;ClusterMaxEditDist=0.0481928;PBcalls=9;Illcalls=26;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-84;DistBack=15278;DistForward=-18;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=85;REFWIDENED=5:30518159-30518327;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:25:1:21:./.:0:0:0:0:1/1:0:35:./.:.:.:.:.:.
chr5	30915519	HG2_PB_pbsv_5704	GCTCAAGTTCATGCTGTTTAAGGGTCAACTGTATATGGTTTACCTAGATGAATGAGTGTCTTATTCTGCCGAGGCTGCCATAAAAACATACCAAAGACTGAATGCTTAAACAACAGAAATGTACATCTCACAGTTCTGAAGACTGGAAGATCCAAGATCATGGTGCCTGCAAGGTAGACTCTGGGGCCTCTTCTCTTGACTTGTAGGCTGCCACATTCTTGCTGTGTGTTCACATGACTTCTTCTTTGTGTGATCTTGGGGAGAGAGAGAAAAAACAAGCTCTCTGATGTCTCTCTCTTTTTAATTTTATTATTATTATTATTTTGAGAAAAAGTTTTGCTCTTGTGACCCAGGCTGGAGTTCAATGGCACCATCTCGGCTCACCACAACCTCTGCCTCCTGAGATCAAGCAATTCTCCTGCCTCAGCCTGCTGAGTAACTGGGATTACAAGCATGTGCCACCATGCCCAGATAATTTTTATATTTTTAGTACAACATGGTTTCGCCATTTGGCCAGGCTGGTCTCAAACTCCTAAC	G	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_23881:HG3_Ill_Krunchall_7864:HG2_Ill_Krunchall_8047:HG2_PB_SVrefine2PB10Xhap12_4118:HG2_10X_allpass_927:HG3_PB_assemblyticsfalcon_21124:HG2_PB_assemblyticsPBcR_20481:HG2_PB_assemblyticsfalcon_21190:HG2_PB_HySA_10578:HG2_Ill_tnscope_638:HG4_PB_assemblyticsfalcon_20706:HG4_PB_SVrefine2Falcon1Dovetail_3472:HG3_PB_pbsv_5534:HG3_PB_SVrefine2Falcon1Dovetail_3537:HG3_Ill_manta_1321:HG3_Ill_MetaSV_4122:HG3_Ill_GATKHCSBGrefine_3808:HG3_10X_allpass_1140:HG2_PB_pbsv_5704:HG2_PB_SVrefine2PBcRplusDovetail_8838:HG2_Ill_SpiralSDKrefine_13456:HG2_Ill_MetaSV_3938:HG2_10X_SVrefine210Xhap12_4112:HG2_PB_PB10Xdip_23882;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4112:HG2_Ill_MetaSV_3938:HG2_Ill_SpiralSDKrefine_13456:HG2_PB_SVrefine2PBcRplusDovetail_8838:HG2_PB_pbsv_5704:HG3_10X_allpass_1140:HG3_Ill_GATKHCSBGrefine_3808:HG3_Ill_MetaSV_4122:HG3_Ill_manta_1321:HG3_PB_SVrefine2Falcon1Dovetail_3537:HG3_PB_pbsv_5534:HG4_PB_SVrefine2Falcon1Dovetail_3472:HG4_PB_assemblyticsfalcon_20706;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.0701754;PBcalls=13;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-536;DistBack=150449;DistForward=-534;DistMin=-534;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=5:30915520-30916059;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:49:0|1:23:2:1:38:./.:0:0:0:0:0/1:56:10:0/1:45:10:.:.:.
chr5	31677424	HG2_10X_allpass_928	TAAAAAGGAGGTATATCCGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCGGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAGCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTTAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_418:HG3_Ill_Krunchall_7873:HG2_Ill_Krunchall_8055:HG4_PB_assemblyticsfalcon_20712:HG3_PB_assemblyticsfalcon_21129:HG2_PB_assemblyticsPBcR_20487:HG2_PB_assemblyticsfalcon_21196:HG2_PB_HySA_10588:HG2_PB_pbsv_5705:HG3_PB_pbsv_5537:HG4_PB_HySA_8467:HG4_PB_pbsv_5735:HG4_Ill_MetaSV_4111:HG3_PB_HySA_8756:HG3_Ill_MetaSV_4123:HG2_Ill_tnscope_639:HG2_Ill_MetaSV_3940:HG4_PB_SVrefine2Falcon1Dovetail_3473:HG4_Ill_scalpel_5452:HG4_Ill_manta_1407:HG4_Ill_GATKHCSBGrefine_4032:HG4_10X_allpass_1088:HG3_PB_SVrefine2Falcon1Dovetail_3538:HG3_Ill_scalpel_5631:HG3_Ill_manta_1323:HG3_Ill_GATKHCSBGrefine_3811:HG3_10X_allpass_1142:HG2_PB_SVrefine2PB10Xhap12_4119:HG2_PB_SVrefine2Falcon2Bionano_2812:HG2_Ill_scalpel_5558:HG2_Ill_manta_1622:HG2_Ill_SpiralSDKrefine_13458:HG2_Ill_GATKHCSBGrefine_3952:HG2_10X_allpass_928:HG2_10X_SVrefine210Xhap12_4114:HG2_Ill_breakscan11_828:HG4_Ill_Spiral_468:HG3_Ill_Spiral_6186;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4114:HG2_10X_allpass_928:HG2_Ill_GATKHCSBGrefine_3952:HG2_Ill_SpiralSDKrefine_13458:HG2_Ill_manta_1622:HG2_Ill_scalpel_5558:HG2_PB_SVrefine2Falcon2Bionano_2812:HG2_PB_SVrefine2PB10Xhap12_4119:HG3_10X_allpass_1142:HG3_Ill_GATKHCSBGrefine_3811:HG3_Ill_manta_1323:HG3_Ill_scalpel_5631:HG3_PB_SVrefine2Falcon1Dovetail_3538:HG4_10X_allpass_1088:HG4_Ill_GATKHCSBGrefine_4032:HG4_Ill_manta_1407:HG4_Ill_scalpel_5452:HG4_PB_SVrefine2Falcon1Dovetail_3473;NumExactMatchSVs=18;ClusterMaxShiftDist=0.107937;ClusterMaxSizeDiff=0.107937;ClusterMaxEditDist=0.107937;PBcalls=14;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-422;DistForward=-305;DistMin=-422;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:31677425-31677762;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3117.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:1:21:1:23:./.:0:0:0:0:1/1:0:44:0/1:4:15:.:.:.
chr5	31850005	HG4_Ill_GATKHCSBGrefine_4034	TATATACATATATATATATACATATATATATATACACATATATATATATACATATATATATATACACATATATATATATACATATATATATATACACATATATATATATAC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_5737:HG3_Ill_GATKHC_9399:HG3_Ill_GATKHCSBGrefine_3814:HG2_Ill_GATKHC_9420:HG2_Ill_GATKHCSBGrefine_3955:HG4_Ill_GATKHC_9533:HG4_Ill_GATKHCSBGrefine_4034:HG2_Ill_GATKHC_9419:HG2_Ill_GATKHCSBGrefine_3954:HG3_Ill_Krunchall_7878:HG3_PB_HySA_8758:HG2_PB_HySA_10592:HG3_Ill_svaba_7364:HG3_Ill_manta_1324:HG2_Ill_svaba_7287:HG2_Ill_manta_1623:HG2_Ill_MetaSV_3941:HG4_Ill_svaba_7396:HG4_10X_allpass_1089:HG2_Ill_svaba_7286:HG3_Ill_svaba_7363:HG3_Ill_GATKHC_9398:HG3_Ill_GATKHCSBGrefine_3813:HG3_10X_allpass_1143:HG2_PB_pbsv_5707:HG3_PB_SVrefine2Falcon1Dovetail_3539:HG3_PB_pbsv_5539;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3954:HG2_Ill_GATKHC_9419:HG4_Ill_GATKHCSBGrefine_4034:HG4_Ill_GATKHC_9533;NumExactMatchSVs=4;ClusterMaxShiftDist=0.157895;ClusterMaxSizeDiff=0.157895;ClusterMaxEditDist=0.157895;PBcalls=6;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=12;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-110;DistBack=-7;DistForward=-107;DistMin=-107;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=273;REFWIDENED=5:31849966-31850348;PctSeqSimilarity=0.9621;PctSizeSimilarity=0.9649;PctRecOverlap=0.8435;SizeDiff=-4;StartDistance=18;EndDistance=14;GTMatch=0;TruScore=92;MatchId=3118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:1:19:1:30:./.:0:0:0:0:1/1:1:47:./.:.:.:.:.:.
chr5	33200859	HG3_PB_SVrefine2Falcon1Dovetail_3547	TCAGTGTCTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_831:HG4_PB_assemblyticsfalcon_20727:HG3_PB_assemblyticsfalcon_21146:HG2_PB_assemblyticsfalcon_21215:HG2_PB_assemblyticsPBcR_20502:HG2_PB_HySA_10605:HG4_PB_pbsv_5746:HG4_Ill_Krunchall_8342:HG3_Ill_Krunchall_7890:HG2_Ill_Krunchall_8073:HG3_PB_HySA_8771:HG4_Ill_MetaSV_4115:HG3_Ill_MetaSV_4126:HG2_Ill_tnscope_640:HG4_PB_SVrefine2PBcRDovetail_2867:HG4_PB_SVrefine2Falcon1Dovetail_3480:HG4_Ill_svaba_7411:HG4_Ill_scalpel_5467:HG4_Ill_manta_1409:HG4_Ill_GATKHCSBGrefine_4040:HG4_10X_allpass_1091:HG3_PB_pbsv_5548:HG3_PB_SVrefine2Falcon1Dovetail_3547:HG3_Ill_svaba_7378:HG3_Ill_scalpel_5642:HG3_Ill_manta_1326:HG3_Ill_GATKHCSBGrefine_3817:HG3_10X_allpass_1144:HG2_PB_pbsv_5711:HG2_PB_SVrefine2PB10Xhap12_4124:HG2_PB_SVrefine2Falcon2Bionano_2814:HG2_Ill_svaba_7300:HG2_Ill_scalpel_5570:HG2_Ill_manta_1624:HG2_Ill_SVrefine2DISCOVARplusDovetail_10230:HG2_Ill_MetaSV_3944:HG2_Ill_GATKHCSBGrefine_3958:HG2_10X_allpass_929:HG2_10X_SVrefine210Xhap12_4121;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4121:HG2_10X_allpass_929:HG2_Ill_GATKHCSBGrefine_3958:HG2_Ill_MetaSV_3944:HG2_Ill_SVrefine2DISCOVARplusDovetail_10230:HG2_Ill_manta_1624:HG2_Ill_scalpel_5570:HG2_Ill_svaba_7300:HG2_PB_SVrefine2Falcon2Bionano_2814:HG2_PB_SVrefine2PB10Xhap12_4124:HG2_PB_pbsv_5711:HG3_10X_allpass_1144:HG3_Ill_GATKHCSBGrefine_3817:HG3_Ill_manta_1326:HG3_Ill_scalpel_5642:HG3_Ill_svaba_7378:HG3_PB_SVrefine2Falcon1Dovetail_3547:HG3_PB_pbsv_5548:HG4_10X_allpass_1091:HG4_Ill_GATKHCSBGrefine_4040:HG4_Ill_manta_1409:HG4_Ill_scalpel_5467:HG4_Ill_svaba_7411:HG4_PB_SVrefine2Falcon1Dovetail_3480:HG4_PB_SVrefine2PBcRDovetail_2867;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0682927;ClusterMaxSizeDiff=0.0682927;ClusterMaxEditDist=0.0682927;PBcalls=14;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=67637;DistForward=15783;DistMin=15783;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=5:33200860-33201182;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:10:1:13:./.:0:0:0:0:1/1:0:47:./.:2:12:.:.:.
chr5	33355563	HG3_PB_SVrefine2Falcon1Dovetail_3549	TTTAACACATTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3945:HG4_PB_assemblyticsfalcon_20729:HG2_PB_assemblyticsfalcon_21217:HG2_PB_HySA_10607:HG2_PB_assemblyticsPBcR_20505:HG4_Ill_Krunchall_8346:HG3_Ill_Krunchall_7893:HG2_Ill_Krunchall_8077:HG4_PB_pbsv_5748:HG3_PB_pbsv_5550:HG3_PB_HySA_8774:HG4_PB_SVrefine2PBcRDovetail_2868:HG4_PB_SVrefine2Falcon1Dovetail_3482:HG4_Ill_manta_1410:HG4_Ill_GATKHCSBGrefine_4043:HG4_10X_allpass_1092:HG3_PB_assemblyticsfalcon_21149:HG3_PB_SVrefine2Falcon1Dovetail_3549:HG3_Ill_scalpel_5644:HG3_Ill_manta_1328:HG3_Ill_GATKHCSBGrefine_3821:HG3_10X_allpass_1146:HG2_PB_pbsv_5713:HG2_PB_SVrefine2PB10Xhap12_4126:HG2_PB_SVrefine2Falcon2Bionano_2816:HG2_Ill_scalpel_5574:HG2_Ill_manta_1625:HG2_Ill_GATKHCSBGrefine_3962:HG2_10X_allpass_930:HG2_10X_SVrefine210Xhap12_4123:HG2_Ill_breakscan11_832:HG4_Ill_Spiral_470:HG4_Ill_MetaSV_4116:HG3_Ill_Spiral_6197:HG3_Ill_MetaSV_4127:HG2_Ill_tnscope_641:HG2_Ill_Spiral_419;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4123:HG2_10X_allpass_930:HG2_Ill_GATKHCSBGrefine_3962:HG2_Ill_manta_1625:HG2_Ill_scalpel_5574:HG2_PB_SVrefine2Falcon2Bionano_2816:HG2_PB_SVrefine2PB10Xhap12_4126:HG2_PB_pbsv_5713:HG3_10X_allpass_1146:HG3_Ill_GATKHCSBGrefine_3821:HG3_Ill_manta_1328:HG3_Ill_scalpel_5644:HG3_PB_SVrefine2Falcon1Dovetail_3549:HG3_PB_assemblyticsfalcon_21149:HG4_10X_allpass_1092:HG4_Ill_GATKHCSBGrefine_4043:HG4_Ill_manta_1410:HG4_PB_SVrefine2Falcon1Dovetail_3482:HG4_PB_SVrefine2PBcRDovetail_2868;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0736196;ClusterMaxSizeDiff=0.0736196;ClusterMaxEditDist=0.0736196;PBcalls=14;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=24492;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=5:33355564-33355906;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:1/1:1:33:1:27:./.:0:0:0:0:1/1:0:46:0/1:2:10:.:.:.
chr5	35191134	HG2_Ill_scalpel_5588	ACAGATGTGTTATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_835:HG3_Ill_Krunchall_7908:HG2_PB_pbsv_5722:HG2_Ill_Krunchall_8095:HG2_PB_HySA_10629:HG3_Ill_Krunchall_7907:HG3_PB_assemblyticsfalcon_21166:HG3_PB_SVrefine2Falcon1Dovetail_3555:HG2_Ill_tnscope_643:HG2_PB_assemblyticsfalcon_21232:HG3_PB_pbsv_5561:HG3_Ill_scalpel_5655:HG3_Ill_manta_1330:HG3_Ill_MetaSV_4131:HG3_Ill_GATKHCSBGrefine_3826:HG3_10X_allpass_1151:HG2_PB_SVrefine2PB10Xhap12_4132:HG2_PB_SVrefine2Falcon1plusDovetail_9476:HG2_Ill_scalpel_5588:HG2_Ill_manta_1628:HG2_Ill_MetaSV_3949:HG2_Ill_GATKHCSBGrefine_3969:HG2_10X_allpass_934:HG2_10X_SVrefine210Xhap12_4134:HG3_Ill_Spiral_6208;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4134:HG2_10X_allpass_934:HG2_Ill_GATKHCSBGrefine_3969:HG2_Ill_MetaSV_3949:HG2_Ill_manta_1628:HG2_Ill_scalpel_5588:HG2_PB_SVrefine2Falcon1plusDovetail_9476:HG2_PB_SVrefine2PB10Xhap12_4132:HG3_10X_allpass_1151:HG3_Ill_GATKHCSBGrefine_3826:HG3_Ill_MetaSV_4131:HG3_Ill_manta_1330:HG3_Ill_scalpel_5655:HG3_PB_pbsv_5561;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00888889;ClusterMaxSizeDiff=0.00888889;ClusterMaxEditDist=0.00890208;PBcalls=8;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=1752;DistForward=-337;DistMin=-337;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:35191135-35191487;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:20:0|1:29:1:1:18:./.:0:0:0:0:0/1:35:15:0/1:31:5:.:.:.
chr5	35196137	HG3_PB_SVrefine2PBcRDovetail_2631	TAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4135:HG3_PB_HySA_8789:HG3_PB_pbsv_5562:HG3_PB_SVrefine2PBcRDovetail_2631:HG3_Ill_scalpel_5656:HG3_Ill_Krunchall_7909:HG3_Ill_GATKHC_9432:HG3_Ill_GATKHCSBGrefine_3827:HG3_Ill_250bpfermikitraw_7628:HG3_Ill_150bpfermikitraw_7456:HG2_Ill_SpiralSDKrefine_13479:HG2_Ill_SVrefine2DISCOVARplusDovetail_10234:HG2_Ill_Krunchall_8096:HG2_Ill_GATKHCSBGrefine_3970;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4135:HG3_PB_SVrefine2PBcRDovetail_2631:HG3_Ill_scalpel_5656:HG3_Ill_Krunchall_7909:HG3_Ill_GATKHC_9432:HG3_Ill_GATKHCSBGrefine_3827:HG3_Ill_250bpfermikitraw_7628:HG3_Ill_150bpfermikitraw_7456:HG2_Ill_SpiralSDKrefine_13479:HG2_Ill_SVrefine2DISCOVARplusDovetail_10234:HG2_Ill_Krunchall_8096:HG2_Ill_GATKHCSBGrefine_3970;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0384615;PBcalls=3;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=-21;DistForward=-9;DistMin=-21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=27;REFWIDENED=5:35196143-35196214;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:39:./.:14:9:4:27:./.:0:0:0:0:0/1:20:20:./.:.:.:.:.:.
chr5	35614173	HG2_Ill_GATKHCSBGrefine_3972	TAAAAAATTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_836:HG4_Ill_Krunchall_8372:HG3_Ill_Krunchall_7913:HG4_PB_assemblyticsfalcon_20750:HG3_PB_assemblyticsfalcon_21172:HG2_PB_assemblyticsfalcon_21235:HG2_PB_assemblyticsPBcR_20526:HG3_Ill_Spiral_6211:HG2_PB_HySA_10634:HG2_PB_pbsv_5724:HG2_PB_SVrefine2PB10Xhap12_4134:HG4_PB_HySA_8505:HG4_Ill_MetaSV_4120:HG3_Ill_MetaSV_4134:HG2_Ill_tnscope_644:HG2_PB_PB10Xdip_23960:HG4_PB_pbsv_5759:HG4_PB_SVrefine2Falcon1Dovetail_3487:HG4_Ill_manta_1413:HG4_Ill_SVrefine2DISCOVARDovetail_4195:HG4_Ill_GATKHCSBGrefine_4052:HG4_10X_allpass_1095:HG3_PB_pbsv_5565:HG3_PB_SVrefine2PBcRDovetail_2633:HG3_PB_SVrefine2Falcon1Dovetail_3558:HG3_Ill_manta_1331:HG3_Ill_GATKHCSBGrefine_3830:HG3_10X_allpass_1152:HG2_PB_SVrefine2PBcRplusDovetail_8840:HG2_PB_SVrefine2PB10Xhap12_4133:HG2_PB_SVrefine2Falcon2Bionano_2823:HG2_PB_SVrefine2Falcon1plusDovetail_9477:HG2_PB_PB10Xdip_23961:HG2_Ill_manta_1629:HG2_Ill_SpiralSDKrefine_13483:HG2_Ill_SVrefine2DISCOVARplusDovetail_10236:HG2_Ill_MetaSV_3950:HG2_Ill_GATKHCSBGrefine_3972:HG2_10X_allpass_935:HG2_10X_SVrefine210Xhap12_4136;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4136:HG2_10X_allpass_935:HG2_Ill_GATKHCSBGrefine_3972:HG2_Ill_MetaSV_3950:HG2_Ill_SVrefine2DISCOVARplusDovetail_10236:HG2_Ill_SpiralSDKrefine_13483:HG2_Ill_manta_1629:HG2_PB_PB10Xdip_23961:HG2_PB_SVrefine2Falcon1plusDovetail_9477:HG2_PB_SVrefine2Falcon2Bionano_2823:HG2_PB_SVrefine2PB10Xhap12_4133:HG2_PB_SVrefine2PBcRplusDovetail_8840:HG3_10X_allpass_1152:HG3_Ill_GATKHCSBGrefine_3830:HG3_Ill_manta_1331:HG3_PB_SVrefine2Falcon1Dovetail_3558:HG3_PB_SVrefine2PBcRDovetail_2633:HG3_PB_pbsv_5565:HG4_10X_allpass_1095:HG4_Ill_GATKHCSBGrefine_4052:HG4_Ill_SVrefine2DISCOVARDovetail_4195:HG4_Ill_manta_1413:HG4_PB_SVrefine2Falcon1Dovetail_3487:HG4_PB_pbsv_5759;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0744337;ClusterMaxSizeDiff=0.0744337;ClusterMaxEditDist=0.0744337;PBcalls=19;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=663;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=5:35614174-35614498;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3123.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:50:0|1:28:6:3:34:./.:0:0:0:0:0/1:27:25:0/1:19:7:.:.:.
chr5	35841809	HG3_Ill_svaba_7401	AATATATATAGATATATATCTAGCATGCTAGATATATATAGATATATATCTAGAATGCTAGATATATAGATATATATCTAGAATGCTAGATATATAGATATATATCTAGCATGCTAG	A	20	PASS	ClusterIDs=HG2_PB_HySA_10658:HG4_Ill_Krunchall_8379:HG4_PB_assemblyticsfalcon_20757:HG3_PB_assemblyticsfalcon_21181:HG2_PB_assemblyticsfalcon_21245:HG2_PB_assemblyticsPBcR_20533:HG4_PB_SVrefine2PBcRDovetail_2877:HG4_PB_SVrefine2Falcon1Dovetail_3491:HG4_Ill_SVrefine2DISCOVARDovetail_4200:HG3_PB_SVrefine2PBcRDovetail_2635:HG3_PB_SVrefine2Falcon1Dovetail_3563:HG2_PB_SVrefine2PBcRplusDovetail_8844:HG2_PB_SVrefine2PB10Xhap12_4139:HG2_PB_SVrefine2Falcon2Bionano_2827:HG2_PB_SVrefine2Falcon1plusDovetail_9484:HG2_Ill_SVrefine2DISCOVARplusDovetail_10239:HG2_10X_SVrefine210Xhap12_4139:HG3_PB_pbsv_5571:HG2_PB_HySA_10659:HG4_PB_pbsv_5765:HG2_PB_pbsv_5730:HG4_Ill_svaba_7436:HG4_Ill_GATKHC_9583:HG4_Ill_GATKHCSBGrefine_4059:HG3_Ill_svaba_7401:HG3_Ill_scalpel_5662:HG3_Ill_Krunchall_7917:HG3_Ill_GATKHC_9443:HG3_Ill_GATKHCSBGrefine_3833:HG2_Ill_svaba_7326:HG2_Ill_scalpel_5591:HG2_Ill_manta_1633:HG2_Ill_SpiralSDKrefine_13490:HG2_Ill_Krunchall_8106:HG2_Ill_GATKHC_9463:HG2_Ill_GATKHCSBGrefine_3979:HG2_Ill_250bpfermikitraw_7939:HG2_Ill_150bpfermikitraw_7428;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7428:HG2_Ill_250bpfermikitraw_7939:HG2_Ill_GATKHCSBGrefine_3979:HG2_Ill_GATKHC_9463:HG2_Ill_Krunchall_8106:HG2_Ill_SpiralSDKrefine_13490:HG2_Ill_manta_1633:HG2_Ill_scalpel_5591:HG2_Ill_svaba_7326:HG3_Ill_GATKHCSBGrefine_3833:HG3_Ill_GATKHC_9443:HG3_Ill_Krunchall_7917:HG3_Ill_scalpel_5662:HG3_Ill_svaba_7401:HG4_Ill_GATKHCSBGrefine_4059:HG4_Ill_GATKHC_9583:HG4_Ill_svaba_7436;NumExactMatchSVs=17;ClusterMaxShiftDist=0.017094;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.0344828;PBcalls=17;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=20;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-116;DistBack=2463;DistForward=-87;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=121;REFWIDENED=5:35841756-35841960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:64:1/1:6:37:1:18:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr5	37293799	HG2_Ill_MetaSV_3953	TTAAAGCAAATGATGATTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACGCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_645:HG2_10X_allpass_937:HG4_Ill_Krunchall_8386:HG2_Ill_Krunchall_8109:HG4_Ill_Spiral_472:HG2_Ill_Spiral_420:HG2_PB_HySA_10666:HG2_PB_pbsv_5733:HG3_PB_SVrefine2Falcon1Dovetail_3565:HG4_PB_pbsv_5769:HG4_PB_assemblyticsfalcon_20762:HG4_PB_SVrefine2PBcRDovetail_2879:HG4_PB_SVrefine2Falcon1Dovetail_3493:HG4_Ill_manta_1418:HG4_Ill_GATKHCSBGrefine_4061:HG4_10X_allpass_1097:HG2_PB_SVrefine2PBcRplusDovetail_8847:HG2_PB_SVrefine2PB10Xhap12_4141:HG2_PB_SVrefine2Falcon2Bionano_2830:HG2_PB_SVrefine2Falcon1plusDovetail_9487:HG2_Ill_breakscan11_837:HG2_Ill_MetaSV_3953:HG2_10X_SVrefine210Xhap12_4147:HG4_Ill_MetaSV_4125;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4147:HG2_Ill_MetaSV_3953:HG2_Ill_breakscan11_837:HG2_PB_SVrefine2Falcon1plusDovetail_9487:HG2_PB_SVrefine2Falcon2Bionano_2830:HG2_PB_SVrefine2PB10Xhap12_4141:HG2_PB_SVrefine2PBcRplusDovetail_8847:HG4_10X_allpass_1097:HG4_Ill_GATKHCSBGrefine_4061:HG4_Ill_manta_1418:HG4_PB_SVrefine2Falcon1Dovetail_3493:HG4_PB_SVrefine2PBcRDovetail_2879:HG4_PB_assemblyticsfalcon_20762:HG4_PB_pbsv_5769;NumExactMatchSVs=14;ClusterMaxShiftDist=0.084507;ClusterMaxSizeDiff=0.084507;ClusterMaxEditDist=0.084507;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=4774;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=5:37293800-37294150;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3125.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:21:0|1:30:0:4:19:./.:0:0:0:0:0/1:38:27:0/1:29:11:.:.:.
chr5	37415489	HG3_Ill_scalpel_5669	CGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCCGGGGGCTGATCCCCCCACCTCCCTCCCGGAAGGGGCGGCTGGGGGTGGGGGGGGCCTGACCCCCCCACCTCACCTCCCTCCCGGGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4150:HG3_PB_assemblyticsfalcon_21185:HG2_PB_assemblyticsfalcon_21252:HG2_PB_SVrefine2Falcon1plusDovetail_9490:HG3_PB_SVrefine2Falcon1Dovetail_3567:HG4_PB_SVrefine2PBcRDovetail_2881:HG2_PB_pbsv_5735:HG3_Ill_MetaSV_4136:HG4_PB_pbsv_5771:HG4_Ill_svaba_7442:HG4_Ill_GATKHCSBGrefine_4063:HG3_Ill_svaba_7408:HG3_Ill_scalpel_5669:HG3_Ill_GATKHC_9449:HG3_Ill_GATKHCSBGrefine_3836:HG2_Ill_svaba_7329:HG2_Ill_scalpel_5594:HG2_Ill_GATKHCSBGrefine_3980:HG3_PB_pbsv_5572:HG4_PB_SVrefine2Falcon1Dovetail_3495:HG3_PB_SVrefine2PBcRDovetail_2638:HG2_PB_SVrefine2PB10Xhap12_4144:HG2_PB_SVrefine2Falcon1plusDovetail_9489;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3980:HG2_Ill_scalpel_5594:HG2_Ill_svaba_7329:HG3_Ill_GATKHCSBGrefine_3836:HG3_Ill_GATKHC_9449:HG3_Ill_scalpel_5669:HG3_Ill_svaba_7408:HG4_Ill_GATKHCSBGrefine_4063:HG4_Ill_svaba_7442:HG4_PB_pbsv_5771;NumExactMatchSVs=10;ClusterMaxShiftDist=0.019544;ClusterMaxSizeDiff=0.019544;ClusterMaxEditDist=0.104918;PBcalls=12;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-153;DistBack=49648;DistForward=-141;DistMin=-141;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=158;REFWIDENED=5:37415475-37415785;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:21:./.:12:9:9:5:./.:0:0:0:0:0/1:30:16:./.:.:.:.:.:.
chr5	37563182	HG3_Ill_MetaSV_4138	ACCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCTGGGCGGGGGGCTGACCTCCCGGCCTCCCTCCCGGATGGGGGGGCTGGCTGGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCAGGCAGAGGCGCCCCTCACTTTCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGGCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGTGCAGAGGGGCTCCTCTCTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCAGGATTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACATCCTTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGCGGCTGGCCGGGCGGGGGGATGACC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_5574:HG2_10X_allpass_938:HG4_10X_allpass_1099:HG4_Ill_GATKHCSBGrefine_4065:HG2_Ill_GATKHCSBGrefine_3982:HG2_PB_SVrefine2PB10Xhap12_4147:HG2_PB_pbsv_5737:HG3_PB_HySA_8801:HG2_PB_HySA_10672:HG4_PB_pbsv_5774:HG4_Ill_MetaSV_4127:HG3_Ill_MetaSV_4138:HG3_Ill_GATKHCSBGrefine_3839:HG4_PB_SVrefine2PBcRDovetail_2883:HG2_PB_SVrefine2PBcRplusDovetail_8850:HG2_PB_SVrefine2PB10Xhap12_4146:HG3_PB_SVrefine2PBcRDovetail_2640:HG2_PB_SVrefine2Falcon2Bionano_2833:HG2_PB_SVrefine2Falcon1plusDovetail_9492;NumClusterSVs=19;ExactMatchIDs=HG3_Ill_MetaSV_4138:HG4_Ill_MetaSV_4127:HG4_PB_pbsv_5774;NumExactMatchSVs=3;ClusterMaxShiftDist=0.259007;ClusterMaxSizeDiff=0.259007;ClusterMaxEditDist=0.259007;PBcalls=12;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-531;DistBack=5113;DistForward=-523;DistMin=-523;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=118;REFWIDENED=5:37563071-37563670;PctSeqSimilarity=0.9805;PctSizeSimilarity=0.9962;PctRecOverlap=0.9474;SizeDiff=2;StartDistance=26;EndDistance=28;GTMatch=1;TruScore=97;MatchId=3127.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:0:32:0:23:./.:0:0:0:0:0/1:7:10:0/1:6:12:.:.:.
chr5	37784681	HG3_Ill_250bpfermikitraw_7642	GCCTCTGTCTCTTTCTCTCTCTCTGCCTCTGTCTTTCTCTCTCTTTCTCTTCTTGACTCCCTCTTTGTCTCTCTGTCTCTTCCTCTCTGTCTTT	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_7946:HG3_PB_pbsv_5576:HG2_PB_pbsv_5740:HG3_PB_HySA_8803:HG3_PB_SVrefine2PBcRDovetail_2641:HG3_Ill_Krunchall_7924:HG3_Ill_GATKHCSBGrefine_3841:HG3_Ill_250bpfermikitraw_7642:HG2_PB_SVrefine2Falcon2Bionano_2834:HG2_Ill_SVrefine2DISCOVARplusDovetail_10246:HG2_Ill_GATKHCSBGrefine_3984;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7946:HG3_PB_SVrefine2PBcRDovetail_2641:HG3_Ill_Krunchall_7924:HG3_Ill_GATKHCSBGrefine_3841:HG3_Ill_250bpfermikitraw_7642:HG2_PB_SVrefine2Falcon2Bionano_2834:HG2_Ill_SVrefine2DISCOVARplusDovetail_10246:HG2_Ill_GATKHCSBGrefine_3984;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0212766;ClusterMaxSizeDiff=0.0212766;ClusterMaxEditDist=0.0215054;PBcalls=5;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-93;DistBack=-70;DistForward=10713;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=146;REFWIDENED=5:37784682-37784920;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:28:./.:23:11:7:15:./.:0:0:0:0:0/1:25:20:./.:.:.:.:.:.
chr5	38867874	HG2_PB_SVrefine2PB10Xhap12_4150	GGGAGATAGGGAAGAATGGAGATGCTCTCACCTCCAAGTAATTTAAATTTAGCTCTCTTGAGACTATTGTATTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4155:HG4_PB_HySA_8535:HG4_PB_pbsv_5785:HG3_PB_pbsv_5582:HG2_PB_pbsv_5747:HG2_PB_HySA_10685:HG4_Ill_250bpfermikitraw_8012:HG4_Ill_150bpfermikitraw_7686:HG3_Ill_250bpfermikitraw_7655:HG2_Ill_SpiralSDKrefine_13499:HG2_Ill_250bpfermikitraw_7958:HG2_Ill_150bpfermikitraw_7442:HG4_Ill_SVrefine2DISCOVARDovetail_4214:HG3_PB_SVrefine2PBcRDovetail_2644:HG2_PB_SVrefine2PBcRplusDovetail_8853:HG2_PB_SVrefine2PB10Xhap12_4150:HG2_PB_SVrefine2Falcon2Bionano_2838:HG2_PB_SVrefine2Falcon1plusDovetail_9496:HG2_Ill_SVrefine2DISCOVARplusDovetail_10250;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4155:HG4_Ill_SVrefine2DISCOVARDovetail_4214:HG3_PB_SVrefine2PBcRDovetail_2644:HG2_PB_SVrefine2PBcRplusDovetail_8853:HG2_PB_SVrefine2PB10Xhap12_4150:HG2_PB_SVrefine2Falcon2Bionano_2838:HG2_PB_SVrefine2Falcon1plusDovetail_9496:HG2_Ill_SVrefine2DISCOVARplusDovetail_10250;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0779221;ClusterMaxSizeDiff=0.0779221;ClusterMaxEditDist=0.12;PBcalls=10;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-73;DistBack=35554;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=232;REFWIDENED=5:38867875-38868179;PctSeqSimilarity=0.9611;PctSizeSimilarity=0.9481;PctRecOverlap=0.4744;SizeDiff=-4;StartDistance=-37;EndDistance=-41;GTMatch=0;TruScore=79;MatchId=3129.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:9:73:1/1:5:36:4:24:./.:0:0:0:0:0/0:39:1:./.:.:.:.:.:.
chr5	40594481	HG3_Ill_150bpfermikitraw_7497	AACATTTGTTGCTTATTTTACAGTATACAAAATTATTAGTATTTTCTATCTTCCTTAGCAAATCTTG	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_7978:HG4_PB_HySA_8560:HG2_PB_pbsv_5755:HG3_PB_pbsv_5591:HG3_PB_HySA_8827:HG2_PB_HySA_10699:HG4_PB_pbsv_5794:HG4_Ill_svaba_7463:HG4_Ill_manta_1421:HG4_Ill_SVrefine2DISCOVARDovetail_4221:HG4_Ill_Krunchall_8423:HG4_Ill_GATKHCSBGrefine_4072:HG4_Ill_250bpfermikitraw_8032:HG3_PB_SVrefine2PBcRDovetail_2648:HG3_Ill_svaba_7432:HG3_Ill_scalpel_5686:HG3_Ill_manta_1339:HG3_Ill_Krunchall_7950:HG3_Ill_GATKHCSBGrefine_3849:HG3_Ill_250bpfermikitraw_7676:HG3_Ill_150bpfermikitraw_7497:HG2_PB_SVrefine2PBcRplusDovetail_8857:HG2_PB_SVrefine2PB10Xhap12_4155:HG2_PB_SVrefine2Falcon1plusDovetail_9500:HG2_Ill_svaba_7347:HG2_Ill_manta_1636:HG2_Ill_SpiralSDKrefine_13510:HG2_Ill_SVrefine2DISCOVARplusDovetail_10254:HG2_Ill_GATKHCSBGrefine_3990;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_250bpfermikitraw_7978:HG4_Ill_svaba_7463:HG4_Ill_manta_1421:HG4_Ill_SVrefine2DISCOVARDovetail_4221:HG4_Ill_Krunchall_8423:HG4_Ill_GATKHCSBGrefine_4072:HG4_Ill_250bpfermikitraw_8032:HG3_PB_SVrefine2PBcRDovetail_2648:HG3_Ill_svaba_7432:HG3_Ill_scalpel_5686:HG3_Ill_manta_1339:HG3_Ill_Krunchall_7950:HG3_Ill_GATKHCSBGrefine_3849:HG3_Ill_250bpfermikitraw_7676:HG3_Ill_150bpfermikitraw_7497:HG2_PB_SVrefine2PBcRplusDovetail_8857:HG2_PB_SVrefine2PB10Xhap12_4155:HG2_PB_SVrefine2Falcon1plusDovetail_9500:HG2_Ill_svaba_7347:HG2_Ill_manta_1636:HG2_Ill_SpiralSDKrefine_13510:HG2_Ill_SVrefine2DISCOVARplusDovetail_10254:HG2_Ill_GATKHCSBGrefine_3990;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0451128;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.0458015;PBcalls=10;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=8223;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=67;REFWIDENED=5:40594482-40594614;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:53:0|1:30:5:1:48:./.:0:0:0:0:0/1:28:22:./.:.:.:.:.:.
chr5	40662949	HG2_PB_SVrefine2PB10Xhap12_4156	TATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCGTTATTTCTGAGGGCTCTGTTCTGTTCCATTGA	GG	20	PASS	ClusterIDs=HG2_PB_pbsv_5757:HG3_Ill_GATKHCSBGrefine_3850:HG2_Ill_GATKHCSBGrefine_3991:HG3_PB_SVrefine2PBcRDovetail_2649:HG3_Ill_SVrefine2DISCOVARDovetail_4293:HG2_PB_SVrefine2PBcRplusDovetail_8858:HG2_PB_SVrefine2PB10Xhap12_4156:HG2_PB_SVrefine2Falcon2Bionano_2842:HG2_10X_SVrefine210Xhap12_4163:HG2_PB_HySA_10701:HG2_PB_assemblyticsPBcR_20564:HG3_PB_pbsv_5593;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4163:HG2_PB_SVrefine2Falcon2Bionano_2842:HG2_PB_SVrefine2PB10Xhap12_4156:HG2_PB_SVrefine2PBcRplusDovetail_8858:HG3_Ill_SVrefine2DISCOVARDovetail_4293:HG3_PB_SVrefine2PBcRDovetail_2649;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.113208;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-108;DistBack=10498;DistForward=146;DistMin=146;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:40662949-40663058;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9364;SizeDiff=0;StartDistance=6;EndDistance=7;GTMatch=0;TruScore=97;MatchId=3131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:30:0:2:30:./.:0:0:0:0:0/1:31:24:./.:.:.:.:.:.
chr5	40794616	HG2_Ill_manta_1639	GTTTTTATTGCATTTGCTTTTGGGTTCTTAGTCATTAAATCCTTGCCTAAGCCAATGTCTAGAAGGGTTTTTCCAATGTTATCTTCTAGAATTTTTATAGTTTCAGGTCTTAGGTTTAAGTCCTTAATCCATCTTGAGTTGATTTTTATATAAGGTTGAGAGATGAGAATCCAGTTTCATTCTCCTACATGTGGCTGGCCAATTATCCCAGCACAATTTGTTGAAAAGGGTGAACAGGGAACACTTCTACACTGCTGGTGGGAATGTAAACTAGCACAGCTGCTATGGAAAACAGTGTAGATATTCCTTAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCTCTTCTGAAAAGAAG	AT	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4141:HG3_PB_HySA_8831:HG3_10X_allpass_1157:HG2_10X_allpass_940:HG3_PB_SVrefine2Falcon1Dovetail_3570:HG3_PB_SVrefine2PBcRDovetail_2650:HG3_Ill_manta_1341:HG2_PB_SVrefine2Falcon2Bionano_2843:HG2_PB_SVrefine2Falcon1plusDovetail_9502:HG2_Ill_manta_1639:HG2_Ill_SpiralSDKrefine_13511:HG2_10X_SVrefine210Xhap12_4165:HG2_Ill_tnscope_646:HG2_Ill_MetaSV_3956:HG3_Ill_Spiral_6241:HG2_Ill_Spiral_421:HG2_PB_pbsv_5759:HG3_PB_assemblyticsfalcon_21216:HG3_PB_pbsv_5594;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4165:HG2_Ill_SpiralSDKrefine_13511:HG2_Ill_manta_1639:HG2_PB_SVrefine2Falcon1plusDovetail_9502:HG2_PB_SVrefine2Falcon2Bionano_2843:HG3_Ill_manta_1341:HG3_PB_SVrefine2PBcRDovetail_2650;NumExactMatchSVs=7;ClusterMaxShiftDist=0.166028;ClusterMaxSizeDiff=0.166028;ClusterMaxEditDist=0.166028;PBcalls=8;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-361;DistBack=7735;DistForward=-363;DistMin=-363;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:40794616-40794978;PctSeqSimilarity=0.9986;PctSizeSimilarity=1;PctRecOverlap=0.9972;SizeDiff=0;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:21:./.:23:7:3:9:./.:0:0:0:0:0/1:58:10:0/1:34:9:.:.:.
chr5	41411977	HG4_Ill_manta_1423	CATATATATGTATCCATATATATATCTCCATATATATGTATCCATATATATATCTCCATATATATGTATCCATATATATGTATCCAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4166:HG4_PB_HySA_8566:HG2_PB_HySA_10709:HG4_PB_assemblyticsfalcon_20801:HG4_Ill_svaba_7468:HG4_Ill_manta_1423:HG4_Ill_Krunchall_8427:HG4_Ill_GATKHC_9641:HG4_Ill_GATKHCSBGrefine_4075:HG4_Ill_250bpfermikitraw_8036:HG4_Ill_150bpfermikitraw_7708:HG3_Ill_svaba_7437:HG3_Ill_manta_1343:HG3_Ill_Krunchall_7957:HG3_Ill_GATKHC_9495:HG3_Ill_GATKHCSBGrefine_3855:HG3_Ill_250bpfermikitraw_7683:HG3_Ill_150bpfermikitraw_7506:HG2_Ill_svaba_7352:HG2_Ill_manta_1641:HG2_Ill_SpiralSDKrefine_13514:HG2_Ill_Krunchall_8146:HG2_Ill_GATKHC_9512:HG2_Ill_GATKHCSBGrefine_3995:HG2_Ill_250bpfermikitraw_7985:HG2_Ill_150bpfermikitraw_7465:HG3_PB_pbsv_5597:HG4_PB_pbsv_5798:HG2_PB_pbsv_5762:HG4_PB_SVrefine2PBcRDovetail_2890:HG4_Ill_SVrefine2DISCOVARDovetail_4226:HG3_PB_SVrefine2PBcRDovetail_2652:HG2_PB_SVrefine2PBcRplusDovetail_8860:HG2_PB_SVrefine2PB10Xhap12_4161:HG2_PB_SVrefine2Falcon2Bionano_2845:HG2_PB_SVrefine2Falcon1plusDovetail_9505:HG2_Ill_SVrefine2DISCOVARplusDovetail_10257;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7465:HG2_Ill_250bpfermikitraw_7985:HG2_Ill_GATKHCSBGrefine_3995:HG2_Ill_GATKHC_9512:HG2_Ill_Krunchall_8146:HG2_Ill_SpiralSDKrefine_13514:HG2_Ill_manta_1641:HG2_Ill_svaba_7352:HG3_Ill_150bpfermikitraw_7506:HG3_Ill_250bpfermikitraw_7683:HG3_Ill_GATKHCSBGrefine_3855:HG3_Ill_GATKHC_9495:HG3_Ill_Krunchall_7957:HG3_Ill_manta_1343:HG3_Ill_svaba_7437:HG4_Ill_150bpfermikitraw_7708:HG4_Ill_250bpfermikitraw_8036:HG4_Ill_GATKHCSBGrefine_4075:HG4_Ill_GATKHC_9641:HG4_Ill_Krunchall_8427:HG4_Ill_manta_1423:HG4_Ill_svaba_7468;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0697674;ClusterMaxSizeDiff=0.0697674;ClusterMaxEditDist=0.127907;PBcalls=12;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=-86;DistBack=-1;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=120;REFWIDENED=5:41411910-41412115;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:68:./.:0:0:0:3:./.:0:0:0:0:1/1:0:56:./.:.:.:.:.:.
chr5	42165928	HG3_PB_SVrefine2PBcRDovetail_2654	TTTAAAACTTTGTTTTTTTTTTTCTTTTCTTTTTTTTTTTTTCTTTTTTTATTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTGTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTGTGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAAGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_8150:HG4_PB_assemblyticsfalcon_20805:HG3_PB_assemblyticsfalcon_21226:HG2_PB_assemblyticsfalcon_21292:HG2_10X_allpass_941:HG4_Ill_Krunchall_8431:HG3_Ill_Krunchall_7962:HG2_Ill_Krunchall_8151:HG2_PB_assemblyticsPBcR_20575:HG4_PB_pbsv_5800:HG4_PB_SVrefine2PBcRDovetail_2892:HG4_Ill_SVrefine2DISCOVARDovetail_4231:HG4_Ill_MetaSV_4131:HG4_Ill_GATKHCSBGrefine_4077:HG4_10X_allpass_1100:HG3_PB_pbsv_5599:HG3_PB_SVrefine2PBcRDovetail_2654:HG3_PB_SVrefine2Falcon1Dovetail_3573:HG3_Ill_MetaSV_4143:HG3_Ill_GATKHCSBGrefine_3858:HG3_10X_allpass_1158:HG2_PB_pbsv_5764:HG2_PB_SVrefine2PBcRplusDovetail_8862:HG2_PB_SVrefine2PB10Xhap12_4163:HG2_PB_SVrefine2Falcon2Bionano_2847:HG2_PB_SVrefine2Falcon1plusDovetail_9507:HG2_Ill_SVrefine2DISCOVARplusDovetail_10260:HG2_Ill_MetaSV_3959:HG2_Ill_GATKHCSBGrefine_3998:HG2_10X_SVrefine210Xhap12_4168:HG2_Ill_breakscan11_838:HG2_Ill_tnscope_647:HG4_Ill_Krunchall_8430:HG3_Ill_Krunchall_7961;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4168:HG2_Ill_GATKHCSBGrefine_3998:HG2_Ill_MetaSV_3959:HG2_Ill_SVrefine2DISCOVARplusDovetail_10260:HG2_PB_SVrefine2Falcon1plusDovetail_9507:HG2_PB_SVrefine2Falcon2Bionano_2847:HG2_PB_SVrefine2PB10Xhap12_4163:HG2_PB_SVrefine2PBcRplusDovetail_8862:HG2_PB_pbsv_5764:HG3_10X_allpass_1158:HG3_Ill_GATKHCSBGrefine_3858:HG3_Ill_MetaSV_4143:HG3_PB_SVrefine2Falcon1Dovetail_3573:HG3_PB_SVrefine2PBcRDovetail_2654:HG3_PB_pbsv_5599:HG4_10X_allpass_1100:HG4_Ill_GATKHCSBGrefine_4077:HG4_Ill_MetaSV_4131:HG4_Ill_SVrefine2DISCOVARDovetail_4231:HG4_PB_SVrefine2PBcRDovetail_2892;NumExactMatchSVs=20;ClusterMaxShiftDist=0.013624;ClusterMaxSizeDiff=0.013624;ClusterMaxEditDist=0.102508;PBcalls=14;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1841;DistBack=5454;DistForward=-1829;DistMin=-1829;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:42165929-42167782;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:93:./.:0:4:0:4:./.:0:0:0:0:1/1:0:41:1/1:4:116:1929:.:.
chr5	43516480	HG2_Ill_manta_1643	ACCGGAAAAAGGAAGAAAGCCTCAGATGGGCATGTGTATAAATCCATAAAATCACTGTGTGTGCTCACTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4176:HG2_PB_HySA_10720:HG2_PB_assemblyticsPBcR_20586:HG3_PB_assemblyticsfalcon_21235:HG4_Ill_Spiral_474:HG2_Ill_Spiral_423:HG4_PB_pbsv_5806:HG4_PB_HySA_8570:HG4_Ill_svaba_7477:HG4_Ill_scalpel_5519:HG4_Ill_Krunchall_8440:HG4_Ill_GATKHC_9656:HG4_Ill_GATKHCSBGrefine_4080:HG4_Ill_250bpfermikitraw_8047:HG4_Ill_150bpfermikitraw_7718:HG4_CG_vcfBeta_3763:HG4_10X_allpass_1101:HG3_PB_SVrefine2Falcon1Dovetail_3578:HG2_PB_pbsv_5769:HG2_PB_SVrefine2PBcRplusDovetail_8867:HG2_PB_SVrefine2PB10Xhap12_4167:HG2_Ill_svaba_7360:HG2_Ill_scalpel_5623:HG2_Ill_manta_1643:HG2_Ill_breakscan11_839:HG2_Ill_SpiralSDKrefine_13520:HG2_Ill_SVrefine2DISCOVARplusDovetail_10264:HG2_Ill_Krunchall_8162:HG2_Ill_GATKHC_9528:HG2_Ill_GATKHCSBGrefine_4002:HG2_Ill_250bpfermikitraw_7997:HG2_Ill_150bpfermikitraw_7478:HG2_CG_vcfBeta_3338:HG2_10X_allpass_942;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4176:HG4_PB_pbsv_5806:HG4_PB_HySA_8570:HG4_Ill_svaba_7477:HG4_Ill_scalpel_5519:HG4_Ill_Krunchall_8440:HG4_Ill_GATKHC_9656:HG4_Ill_GATKHCSBGrefine_4080:HG4_Ill_250bpfermikitraw_8047:HG4_Ill_150bpfermikitraw_7718:HG4_CG_vcfBeta_3763:HG4_10X_allpass_1101:HG3_PB_SVrefine2Falcon1Dovetail_3578:HG2_PB_pbsv_5769:HG2_PB_SVrefine2PBcRplusDovetail_8867:HG2_PB_SVrefine2PB10Xhap12_4167:HG2_Ill_svaba_7360:HG2_Ill_scalpel_5623:HG2_Ill_manta_1643:HG2_Ill_breakscan11_839:HG2_Ill_SpiralSDKrefine_13520:HG2_Ill_SVrefine2DISCOVARplusDovetail_10264:HG2_Ill_Krunchall_8162:HG2_Ill_GATKHC_9528:HG2_Ill_GATKHCSBGrefine_4002:HG2_Ill_250bpfermikitraw_7997:HG2_Ill_150bpfermikitraw_7478:HG2_CG_vcfBeta_3338:HG2_10X_allpass_942;NumExactMatchSVs=29;ClusterMaxShiftDist=0.167939;ClusterMaxSizeDiff=0.167939;ClusterMaxEditDist=0.186047;PBcalls=9;Illcalls=20;TenXcalls=3;CGcalls=2;PBexactcalls=6;Illexactcalls=18;TenXexactcalls=3;CGexactcalls=2;HG2count=20;HG3count=2;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-69;DistBack=-43;DistForward=-25;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:43516481-43516551;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3136.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:25:./.:10:14:13:5:./.:0:0:0:0:0/1:21:22:./.:.:.:.:.:.
chr5	43523637	HG3_Ill_GATKHC_9512	GAATGCAGATGCATTTGTGTACATGGGTATCATGGTTTTTTTTTCCCCTGTGAAGT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2852:HG2_PB_HySA_10721:HG4_PB_HySA_8571:HG4_Ill_svaba_7478:HG3_PB_HySA_8851:HG4_Ill_Krunchall_8441:HG4_Ill_GATKHC_9657:HG4_Ill_GATKHCSBGrefine_4081:HG4_Ill_Cortex_2916:HG4_Ill_250bpfermikitraw_8048:HG4_Ill_150bpfermikitraw_7719:HG4_CG_vcfBeta_3764:HG3_PB_pbsv_5605:HG3_Ill_svaba_7445:HG3_Ill_scalpel_5699:HG3_Ill_manta_1345:HG3_Ill_Krunchall_7971:HG3_Ill_GATKHC_9512:HG3_Ill_GATKHCSBGrefine_3862:HG3_Ill_Cortex_2925:HG3_Ill_250bpfermikitraw_7697:HG3_Ill_150bpfermikitraw_7519:HG3_CG_vcfBeta_3206:HG3_10X_allpass_1159:HG2_PB_assemblyticsfalcon_21299:HG2_Ill_svaba_7361:HG2_Ill_scalpel_5624:HG2_Ill_manta_1644:HG2_Ill_breakscan11_840:HG2_Ill_SpiralSDKrefine_13521:HG2_Ill_Krunchall_8163:HG2_Ill_GATKHC_9529:HG2_Ill_GATKHCSBGrefine_4003:HG2_Ill_Cortex_7034:HG2_Ill_250bpfermikitraw_7998:HG2_Ill_150bpfermikitraw_7479:HG2_CG_vcfBeta_3339:HG2_10X_allpass_943:HG2_PB_pbsv_5770:HG2_PB_assemblyticsPBcR_20587:HG4_PB_pbsv_5807:HG4_Ill_SVrefine2DISCOVARDovetail_4234;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_943:HG2_CG_vcfBeta_3339:HG2_Ill_150bpfermikitraw_7479:HG2_Ill_250bpfermikitraw_7998:HG2_Ill_Cortex_7034:HG2_Ill_GATKHCSBGrefine_4003:HG2_Ill_GATKHC_9529:HG2_Ill_Krunchall_8163:HG2_Ill_SpiralSDKrefine_13521:HG2_Ill_breakscan11_840:HG2_Ill_manta_1644:HG2_Ill_scalpel_5624:HG2_Ill_svaba_7361:HG2_PB_assemblyticsfalcon_21299:HG3_10X_allpass_1159:HG3_CG_vcfBeta_3206:HG3_Ill_150bpfermikitraw_7519:HG3_Ill_250bpfermikitraw_7697:HG3_Ill_Cortex_2925:HG3_Ill_GATKHCSBGrefine_3862:HG3_Ill_GATKHC_9512:HG3_Ill_Krunchall_7971:HG3_Ill_manta_1345:HG3_Ill_scalpel_5699:HG3_Ill_svaba_7445:HG3_PB_pbsv_5605:HG4_CG_vcfBeta_3764:HG4_Ill_150bpfermikitraw_7719:HG4_Ill_250bpfermikitraw_8048:HG4_Ill_Cortex_2916:HG4_Ill_GATKHCSBGrefine_4081:HG4_Ill_GATKHC_9657:HG4_Ill_Krunchall_8441:HG4_Ill_svaba_7478;NumExactMatchSVs=34;ClusterMaxShiftDist=0.213592;ClusterMaxSizeDiff=0.213592;ClusterMaxEditDist=0.235294;PBcalls=9;Illcalls=28;TenXcalls=2;CGcalls=3;PBexactcalls=2;Illexactcalls=27;TenXexactcalls=2;CGexactcalls=3;HG2count=18;HG3count=13;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-55;DistBack=7087;DistForward=1629;DistMin=1629;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=5:43523631-43523695;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:40:./.:5:32:19:7:./.:0:0:0:0:0/1:25:25:./.:.:.:.:.:.
chr5	46270652	HG2_PB_pbsv_5780	CTTCTCAAAAGAAGACATTCATGGAACCAAAAGAAGCATGAAAAATGCTCTTCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATAACTTCTCACACCTGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTTTTGAAGAGACTGTAAACTAGTTCAACCTTTGTGGAAGTCGGTGTGCCAATTCTTCAGGGATCAGAACTAGAAATACCACTTGACCCAGCCATCCCATTAGTGGGTATATACCCAAAGGATTATAAGTCATGCTGCTGTAAAGACACATGCACACGTATGTGTATTGTGCCACTATTCACAGCAGCAAAGACTTGGTACCAACCCAAATATCCAACAATTGTAGACTGCATTAAGAAAGTGTGGCACATATATACACCTTGGAATAATATGCAGACATAAAAAACGATGAATTCATGTCCTTTGTAGGGACATCGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCACAAGGAGAAAAAACCAAACACTGCATGTTCTCACTCATAAGCGGGAATTGAACAGTGAGAACACATGGACACAGGGAGGGGAACATCACACACTGGGACCTGTTGTGGGGTGGTGGGAGGGGGGAGGGATAGTATTAGGAGATATACCTAACATTAAATGAAGAGTTAATGGGTGCGGCACACCAACCTGGCACATGTATACATATGTAACAAACCTGCACATTGTGCACATGTACCCTAAAATTTAAAGTATAAAAATAAGAAAAAAAAAAACAGTGTTTCTGAACTGTTGATTAAAAGAAGGATTCAGCTCTGTGAGAAGAATGTACACATCAGAAAGTAGTTTCTGTGAACACTTCTTTTCAGTTTTTTCTGAAGATATTTCCTTCTTCAACATAGGCCTTTTTGCACTACAAAATATCACTTCACAGATTATACAAAAACTGTGTTTCCAAACTGCTCACTCAAAAGAAATACTTAACTCTGTGAGATGAATGCAAACAGCAAGAAGCAGTTTTCTCAAAAAGCTTCTTTCTAGTGTTTATCTGAAGATATTTCCATTTCGCCATTGGCTTCAGGGTGGTCCCAAATATTCTTTAGAGATTCTACAAAAACAGTAAGTCCAAACTCTTTAATCAAAAGAAACGTTTAACTCTTTGACAAGAAAGCACACATCACAAAACAGTTCTCAGAAAGCTTCTTTCTAGTTTTTATCTGAAGTTATTTGATTTTTAACCAAGGCCTCACATGCTCCCAAATATTCATTCGGAGATTCTACAAAAACAGTGTTTCCAAACTGATCAATCTAAGAACTGATTAATTCTGTGAGATGAAAGCAAACATCTCAAAGCAATTTCTCAAACAGTTTCTTTGTAGTTTTTACCCAAAGATATTTCCTTTTTCACCATAGGCATCAATTTGCTCCCAAATATCCCTTTGCAGATTCTACAAAAAGAGTGTTTCCAAACTGTTCCAGAAAAAAAAGGACTTACCTCTGTGAGATGAATGCACATATAATAATGCAGTTTCTCATAATGCTTCTTTCCAGTTTTTTTCTGAAGATATTTCTTTTATCAACATATGTATTTTTGGGCTAACAAACATCACTTTGCAGATTATACAAAAACAGTGTTTCTAAACTGCTCAGTCAAAAGAAAGTGTTAACTCTGTGAGACGAATGCACATATCAGAAAGCAGTTTCTCAAAAAAATTCTTTCTAGTTTATATCCAAAGATATTTCCTTTTCCAGCATAAGCCCCAATCTGCTCTGAAATACCCCTTCACAGATTCTACAAAAAGAGTGTTTCCAAACTGCTCCATCAAAGGTAGGATTTCACTCTGTGAGATGAACACACATATCAGAAAACAGTTTCTCACAATGCTTCTTTCCACTTTTTATCTGAAGATACGTCCATGCTCACCATACGCCTCTTTAGGCTACCTAACATCACTTCACAGAATATACGAAAACAGTGTTTCCAAACTGCTCAATCAGAAAAAAAGTTTAATTCTGTTAGATGAATGCATGCATCACAAAGCAGTTTCTCAAAAAGCTTCTTTCTAGTTTGTATCTGAAGATATTTCCTTATTCACAATAGGCATCCATGTGCTCCCAAATATCCCTTTGCAGATTCTACAAAAACAGTGTTTCCAAACTGCTCAATCAAAAGCAACATTTAACTCTGTCAGAAGAATGCAGACATCACAAAGCAGTCTCTCAGAAAACTTCTGTCGAGTTTTTATCTGAAGATATTTTCTTTTTCAACATAGGACTCAATGTGCAAAAAAATACATGCGCTCACAAATATCAATTTGCAGATTCTACAAAAAAGTATTCCAAACTTCTCAATCAAAAAACAGATTTATCTCTATCAGTTGAATGCACACATCACAAAGCAGTTTCTCAGATAGCTTCTATCTTGTTCTTCTCTGAAGATATTTTCTTTTCCACCACAGGCCTCAATGTGCTCCCAAATATCCCTTTGTAGATTATGTAAAAACATTGTTTCTGAACTCTTCCATCAAAATAAGTACTTAACTCTGTGAGATGAATTCACTCTTTAGAAAGCAGTTTCTCACAACGTTTCTTTCCAGTTTTTATCTGAAGATATTTACTTTTTCAGCACAGGCTTTTTGTGCTCCCTAACATCACTTCGTAGATTACACAAAAACAGTGTTTCCAAAGTGCTCAAACAAAAGCCACGTTTAACTCTATGAGATGAATGCACACATCACAGAGAGGTTTCTCAAAACGCATTTTTGTAGTTTATACCGAAAGATATTTCCCTTTTCACCATAGTCCTTATTGCACTCCCAAATGTACCTTTGCAGATTCTACAAAAACTGTGTTTCCAAACAGCTCCATTAAAAGATATGTTTAACTCTCTGGGATGAATGCACATGTGACAAAGCAGTTTCTCAGGCAGTTTATCTCTTTCTTCTCTGAATATATTTCCTTTACACCATAAGTCTCAATGTGCTCCTAAATATCACTTTTATAGATTCTATTAAAAACAGTGTTTATGAACTGTTCAGTCAAAAGAAGGCTTTAACACTGTGATGTAAAAACAAACTTCAGAGAGCAGTTTCTCATAACGCTTCATTCCAGTATTTTTTTCTGAAGATATTCATCATAAGCCATTTTGTGCTAACATTGCTTCACAGATTATACTTAAACAGTGTTTCCAAACTGCTCAATCAAAAGAAACGTTTAAATCTATGAGAAGAATACATACTTCACAAAGTCATTTCTCAGAAACTTTCTTCTTTTTATCTGAAGTTATTTACTTCTTGATTATAGGCCTTGTGCTCTCTGAAATATCCCTTCACAGATTCTGCATAAACAGTGTTTTCAAACTGATCAATCAGAAGAAAGTTTTAACACTGTGAGATGAATGCACACATTACAAAGCAGTTTCTCAGATACATACTGTCTAGTTCTTCTCCAAAGTTATTTCCCTTTACACCATAGGCTTAAGTGCACTCTCAAAAATCCATTTGCAGACTGTATAAAAACAGGTTTCTGAAATGTTCCATCAAAAGAAGGACTTAACTCTGTGAGATGAATGCACACATCAGAAAGTAGTTTCTCATAATGTTTCCAGTTTTTATCTGAAGATATTTCCCTGTTCACCATAGGCCTTTTTGTGCTACCTAACATCACTTCACAGATTATAAAAAAACAGTGTTTCCAAACTGCTCAGTCAAAAGGAAAGTTTAACTCTGTGAGATGAATGCATACATCACAAAGCAGTTTCTCAATAAGCTTCTTTCTAGTCTTTACCAAAGATAATTCCATTTTCACTGTAGGCAAATGTGTGCTCTCAAATATCCCTTTCCAGATTCTACATAAAGAGGGTTTCCAAACTGCTCAATGAAAAGAAACTTTTAGCTCTGTAAGAAGAATGCATAACACAAAGTGATTTTTCAGAAGGGTTCTTTCTAGTTGTTATCTGAAGTTATTTCCTTTTTCAACATAGATGTCATGTGCTCCCAAATATTGTTTTGCAGATTCTACAAAAACAATGTGTCCAAACTGATCAATCAAAAGATAAGTTTAACTCTGGGAGATGAATGCACACATCACAATGCCATTTCTCAAAGTTTCTTTCTAGTTTTTATCCGAATATATTTCCTTTTTCACCATAGGCTTCATGGCTCTCTGAAATATCCCTTCGCAGATTCTACAAAAACAGTGTTTCCAAACTGCTCAATCAAAAGAAAGGATTAACTATGTGATATGAATGCACACATCACAAAGCAGTTTCTAAGAAAGCTTCTCTCTAGTTCTTCTCTGAAGACATTTCATTTTCCACCATAAGCCTAAATGCACTCCCAAATATCCCATAGCAGATTCTACAAAAACAGTGTTTCCCAAGTGTTCAATCAAAAAACAGGTTTAACTCTGTGAATTGAACAGACACATCACAAAGCAGTTGTGAAAAACCTTCTTTCTAGTTTTTATCCGAAGGTATTTCTTTTTCCCCCATAGGCCTCAGAGTGCTACAAAATATACCTTTGCAATTTCTACAAAAGCAATGTTCCAAACTGCTTGGTCAAAAGAAAGGCTTAACTCCGTGACATGAATGTCCACATAACAAAGCAGTTTCTTAGATAGCTTCTTGTAGTTCAATTCTCTAAAGATATTTCCTTTGCCATGATAGTCTTCAAAGTGCTCACAAATATTCCTTCACCAACCCTATAAAAACAGTGTTTCCAGACTGTTCCATCAGAATAATTATTTAACTATGTGAAATGAAAGCACACATCATAAAGCAGTTTCTCATAATGCTTCTTTCCAGTTTTTATCTGAAGATATTTCCTTCCCCATGATAGGCCTTTCTGCACTACTAAATATCTGTTTGCAGATTACACAAAAACAGTGTATCCAAACTGCTCAGTAAGAAGAAAAGTTTAACTGTGTGAGAAGAATGCGTGCATCACAAAGAAGTTTCAGAAAGCATTCTGTCTAGTTTTTATCCGAAGATATTTCCTTTTTCACCACAGGCATCAGTGCACTTCCGAATATCCCTTTGCAGTTTATAGAATAACAGAGTTTCCAAACTGCTCAATAAAAAGAAACGTTTACATCTGTGAGATGAAAGCACACATCACAAAGAAGTTTCTCAAACAGCTTCTCTCTTG	C	20	PASS	ClusterIDs=HG4_Ill_Krunchall_8461:HG4_PB_assemblyticsfalcon_20823:HG3_PB_assemblyticsfalcon_21250:HG4_10X_allpass_1105:HG3_10X_allpass_1162:HG2_PB_assemblyticsfalcon_21314:HG2_PB_assemblyticsPBcR_20597:HG2_10X_allpass_944:HG2_Ill_tnscope_648:HG4_PB_pbsv_5821:HG4_PB_SVrefine2Falcon1Dovetail_3501:HG4_Ill_SVrefine2DISCOVARDovetail_4247:HG3_PB_pbsv_5611:HG3_PB_SVrefine2PBcRDovetail_2657:HG3_PB_SVrefine2Falcon1Dovetail_3584:HG3_Ill_SVrefine2DISCOVARDovetail_4294:HG3_Ill_MetaSV_4146:HG3_Ill_GATKHCSBGrefine_3866:HG2_PB_pbsv_5780:HG2_PB_SVrefine2PBcRplusDovetail_8871:HG2_PB_SVrefine2PB10Xhap12_4171:HG2_PB_SVrefine2Falcon2Bionano_2857:HG2_PB_SVrefine2Falcon1plusDovetail_9517:HG2_Ill_SVrefine2DISCOVARplusDovetail_10279:HG2_Ill_MetaSV_3964:HG2_Ill_GATKHCSBGrefine_4008:HG2_10X_SVrefine210Xhap12_4183:HG2_Ill_breakscan11_841:HG2_Ill_SpiralSDKrefine_13526:HG4_Ill_MetaSV_4137:HG4_Ill_Krunchall_8462:HG3_Ill_Krunchall_7980:HG2_Ill_Krunchall_8172;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4183:HG2_Ill_GATKHCSBGrefine_4008:HG2_Ill_MetaSV_3964:HG2_Ill_SVrefine2DISCOVARplusDovetail_10279:HG2_PB_SVrefine2Falcon1plusDovetail_9517:HG2_PB_SVrefine2Falcon2Bionano_2857:HG2_PB_SVrefine2PB10Xhap12_4171:HG2_PB_SVrefine2PBcRplusDovetail_8871:HG2_PB_pbsv_5780:HG3_Ill_GATKHCSBGrefine_3866:HG3_Ill_MetaSV_4146:HG3_Ill_SVrefine2DISCOVARDovetail_4294:HG3_PB_SVrefine2Falcon1Dovetail_3584:HG3_PB_SVrefine2PBcRDovetail_2657:HG3_PB_pbsv_5611:HG4_Ill_SVrefine2DISCOVARDovetail_4247:HG4_PB_SVrefine2Falcon1Dovetail_3501:HG4_PB_pbsv_5821;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00980298;ClusterMaxSizeDiff=0.00980298;ClusterMaxEditDist=0.00980298;PBcalls=14;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-5184;DistBack=9847;DistForward=-5183;DistMin=-5183;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=5:46270653-46275840;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:122:1/1:3:37:1:20:./.:0:0:0:0:1/1:1:27:1/1:7:335:5217:.:.
chr5	49941797	HG4_Ill_GATKHCSBGrefine_4098	TATATTTTTATATAATTATATAATTATATATAATTGTATATTTATATATAATTGTATAATTATATATAATTGC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7489:HG3_PB_HySA_8871:HG4_Ill_GATKHCSBGrefine_4098:HG3_Ill_GATKHCSBGrefine_3868:HG2_Ill_GATKHC_9545:HG2_Ill_GATKHCSBGrefine_4019;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7489:HG4_Ill_GATKHCSBGrefine_4098:HG3_Ill_GATKHCSBGrefine_3868:HG2_Ill_GATKHC_9545:HG2_Ill_GATKHCSBGrefine_4019;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0137931;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0275862;PBcalls=1;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-72;DistBack=159;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=5:49941796-49941876;PctSeqSimilarity=0.8571;PctSizeSimilarity=0.8;PctRecOverlap=0.7582;SizeDiff=-18;StartDistance=-4;EndDistance=-22;GTMatch=0;TruScore=80;MatchId=3139.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:34:./.:13:8:20:16:./.:0:0:0:0:./.:0:2:./.:.:.:.:.:.
chr5	50234380	HG2_PB_SVrefine2Falcon2Bionano_2860	AACTAAATTTTGTGATAATTTTGAGTGGGCGTGAATTCCCTTAAACAGAACCCAGGGAGCAAATAGAAACTGCTGCAGATACAACTGTGGGAGCTGGATGCTGGCATTATGGGCAGACAAAGAGGGGCAGGGCCTGAAGACCATGCTTGCTTTCTCATCAGGGAAGCTTATGGCCTGGGGCAGGTCTGGGTTCTTTGTGAAGGTTGTCTGGATCTAAACTCGGCACTGTTAGCAGGGTGCTGTTGGTGTGAGACTGGCCTTGCCAACTGCTTGGTAGCTGAGTGAGGCCTACAGCTACCAGTTATTCCCCACTCCCCATGCGGACTCTACTGCACAGTAGAGGCAGCCATACTCCCCTCTGTAACATAACCTCATTGGCCTGAGAACCACACTCCCACACCCACAGTGGCTATGGTAAGCCCTGCCCAGGGAGAGTTTGAGCTCAGCCCTGCCTAACCCTGCCCCGACCTAGTGGTCTTTCTTTACCCACCCTGGTTGCTAAACACAAAAGACATAAACTCTTGTGAGCTTTATGGCCCATCCTGTCACCTGAGAAACTAGAAACTTCCCCTGGCCAATTTAGGGCAAGTTTAAATAGCACTGCTAATAGCTCAGCTGATGCTCTCTTAAAAGCACCACCTCCTGGCTGGAGGACAACCAACTCAGTCCATTACAGTAACCCTTGGCAGAATAATACTTTATTTTTTCCTGCTCCCAGGAAAAAGAAAACAGCAGGTAAGACTGCTGCCTGCAACACCCTGGCTAACCAGAGGTTCTGAGTCTGTCCACATGACAATTTCACTGCTAGCATAACCATCATTTGAGAAAGCCAGCACACTAAACCTATCTACAACCAAGGAATCTCACAGAATCTGCATAATTCCCCTGCCGCCTCCATCAGAGCAGGTGCTGATATCCATGGCTAGGAGACCTGAAGACTAATCACATCACTGGACTCTTTACAGATATTCCCTGCACCAGCCTGGAACCTGGCAGCCCCACTGGGTGGTTAGGCCCAGAAGAGCAATAACAATCACTGCAGTCTAGCTCTAGGGAAGCCCCATCCCTAGCGGAAGGAGAAGAGTACCACATCAAGGGATCAACCCAATGGGACACAAGAATCTGAACAGTGGGCCTTGTGTTCCAGATCCTTCCACTGGTGGGAAGTTTCTTATAGCAGAGGCACAACTGCAGTGTTGGGCACAGTAGGGAAAGTCTGCACCTATACCTCAACAGGCAGGCAGCCTCTGGGATACCCCAACAGACAGGCAGCCTCTGGGATCATGAAGGAGCTTGGCAAAGGAGTCCTTGTTCACCCCTGGCACTCCACTTCAGACACATTTAGAGCTTTCTTCACAGGAACACACCATAGAGGCACCTATAGACAGCTTTCCTGGAACAATCTAGGGTGAGCGCAGCCCCACAAGAAGAGCACATCCCAGATTCAGGCCTGCATGAGAGGCACCATCACAATTCCTCCCTACTTGGAACATCAATATTCCTACAGATGAAAAGAGGTGCCTGTCTGACCTGAATAGCTGAAACTCTGGGAGAGGAGTAAGTCTGCTAAGTAAACAGTTTTCCTCCTTGCCTGGTTGGGGAGCTGAGGTGTCTCCCACTCTTCACCTTATCAAACCTCAATACACCTAATTGAGAGCTCCCCCAGCCACCCTCATCAAGGCTGCAACCTCACTCCACCACTGGGTATTAAATCTACACACCTACCTTAGCCACAACTGGTGCCTAGCCTGGGATACCTCCCTTATTTGCCTACAGCCTGAATCATCAACTCAAATAAAATACTGGGTGATAAAAGACAAAGAAGGACGTTATATAATGATAAAAAGATTTAGTCCAACAGGAAGATATTACAATCCTAAATACATATGCACTCCCAAATTCATAGAACAATTATTACTAGACCTAAGAAATGAGATAGACAGCAACACAGTAATAGCAGGGAACTTCAATACTTCTCTGACAGCACTAGACAGGTCATCAAGACAAAGTCAACAAAGAAACAATAGACTTATACCCTAGAACAAATGAACTCAGCAGATATTTATAGATCATTCTACCCAACAACTGCAGAATATACATTCTATTCATCAGCACATGGAACATTCTCCGGGATAGATCATACGATAGGCCACAAAACAAGTCTCAATAAATTTTAGAAAATTGGAATCATATCAAGTATCTTTCCAGTTCACAGTGGAATAAAACTGGAAGTTAATTCCAAAAGGAAACCTCAAAACCATACAAATACATGGAAATTAAATAATCTGCTCCTGAATGATCCTTGGGTCAACAATTAAATCAAGATGGAAGTTGAAAAATTCTTTAAACTGAGTGATAACAGTGACACAACTTATCAAAACCTCTGGGATACAGCAAAAGTGGTGCTAAGAGGAAAGTTCATAGCATTAAATGCCCGTAACCAAAAGTCTGAAAGAGCACAAATAGACAACCTGATGTCACACCATAAGGAACTAGAAAAACAATAAACTAAACCCATACCCAACAGAAGAAAAGAAATAACAAAAATAAGAGCAGAAGTAAATGAAATTGAAACAGCAAAATACAAAAGACAAATTAAAAAAAAGTTGTTCTTTGAAAAGATAAAATTGATAGACCATTAGTGAGGTTAAACAAGAAAAGAAGAGAGATGATGCAAATAATCTCAATTAGAAATGAATTGGGAGATATTAAAATTGATGTTACAGAAATACAAAAGATCATTCAAGGCTACTATGAACACCCTTATGCGCACAAACTAGAAAATCTAGAGGAGGTGGATAAATTCCTGGAAATATGCAACCTTCCTGGATTAAATCAGGAAGAAATAGAAACTCTGAATGGACAAATAACAAGCAGCGAGAATGAATTAGTAATTTAAAAACTGCCAACAAAAAAGTTCAAGACCGGATGGATTCACAGCTGAATTCTATCAGACATTCAAAAAAGAACTGATACTAATCCTGCTAAAATTATTCCAAAAGATAGAGAAAGAGGGAATCCTCCCTAAGTCATTCTATGAAGCCAGTACTAGCCTAATACCAAAACCAGGAAAAGGCATAACATAAAAAGAAACCTACAGGCAAATATCCCTGATGAACATAGATGTAAAAATCCTCAACAAAATGTTAGCTAGCTGAATCCAGCAGCATATCAAAAAGATCAAGTGGGTTTCTGCCGGGGATGCAGAGATGATTTAACATACACAAGTCAATAAATGTGATACATCACATAAACAAAATTGAAAACAAAAATCATATGATCATCTCAACAGATTCAGAAAAAGCATTTGACAAAATACAACCTCCCTTTTTGATGAAAACCCTCAATAAAATTGGCATAGAAGGGACATACCTCAAAGTAATAAAAGCCATCTGATATGGTTTTGTTCTGTGTCCCCTCCCAAATCTCATCTCTATTTGTAATCCCCACATGTTGAGGGAGGGACTTGTAATCCCCATGTGTCAAGGGAGGGAGGTGATTGGATTATGGGGACAGTTTCCCTCATGCTGTTCTCATGATAGTGAGTCAGTTCTCATGAGATTTGATGGTTTTATAAATGTTCTTCCTTCACTCTTTCTCACTTGCTGCCATGTAAGATGTGCCTGCTTCCCCTTCTGCCATGATTGTAACTTTCTGAGGCCTCCTCAGCCATGCAAAACTGTGAGTCAGTTAAACCTGTTTCCTTTATAAATTACTCTGTCTAGGGTAGTACTTTATAGCAGTGTGAAAATGGACCAATACCCTATCTATTACAAACCCACATCCAACATCCTACTGAATGGGGAAACATTGAAAGCATTCCCCCTGAGAACTGGAATAAGACAAAGATATCCACTTTCCTCACTTCTATTCAACATAGTATTGAAGTCCCAGCCAGAGCAATAAGACAAGAGCAAAAAATAAAGGGCATCCAAATTGGAAAAGAGGAAATCAAACAGTTGCTGTTCACCAATGATATAATTGTATACCTAGAAAACCCTAAAGACTCACTCATAAAGCTCCTAAATCTGACAAACAAATTCAGTAAAGTTTAAGGATACAAAATCAATGTATATAAATCAGCAGTACTGCTATACATCAACAACGACCAAGCTGAGAATCAAATCAAGAACTGAATCCCTTTTACAACAGCTGCAAAGAAATAAAATACTTAGAATTATAGTTACCTAAGGAGGTAAAAGGTCTTTACAAGGAAAACTACAAAACACTGCTAAAAGAAATCACAGATGACACAAACAGATGGAAACACATCCCATGCTCATGAATGGTTAGAATCAATATAGTGAAAATGACCATACTGGAAAAAGCAATCTACAGATTCAACACACTTAGAATCAAAATACCATCATCATTCTTCAAAGAACTAGAAAAAAAAATCCTAAAATTCATATGGAACCAAAAAAGAGCCTGCATAGCCAAAGCAATACTAAGCAAAAAGGACAAATCTGGAGGCATCACATTACCTGAATTCAAACTATACTACAAGGCTATAATTATCAAAACAGCATGGTACTGGTATAAAAATAAGCATGTAGACCAATGAAACAGAATAAGGAAGCCAGAAATAAAGCCAAATACTTACAGCCAACTGATATTCAACAAAGCATACAAAAACATAAACTGGAGAAAAGACACCATATTCAGGCCTGGCACGGTGGCTCACACCTATAATCCCGGCACTTTGGCAGGTGAAGGTGGGTGAATCAGCCTTGTTCAAGACCAGCCTGGCTAACATAGTGAAACTACGGTGAAACCCCATCTCTACTAAAAATACAAACATTAGCCAGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTCAGGAGGCTAAGGCAGAAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCATGCCATTGCACTGCAGCCTGGGCAACAAGAGTGAGACTCCATCTCAAACAAACAAACAAACAAAAAAAGACACCCTGTTCAATAAATGGTGCTGGAATAACTGGCAAGCCACATGTAGAAGAATGAAACTGGATCTTCCTCTCTCACCATATACAAACATCGATTCAAGATGGATTAAAG	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_842:HG3_10X_allpass_1163:HG2_PB_pbsv_5784:HG3_PB_assemblyticsfalcon_21259:HG2_PB_assemblyticsPBcR_20604:HG2_PB_assemblyticsfalcon_21322:HG2_10X_allpass_945:HG3_PB_pbsv_5615:HG3_Ill_Krunchall_7987:HG2_Ill_Krunchall_8181:HG2_PB_HySA_10740:HG3_PB_SVrefine2PBcRDovetail_2663:HG3_PB_SVrefine2Falcon1Dovetail_3588:HG3_Ill_MetaSV_4150:HG2_PB_SVrefine2PBcRplusDovetail_8877:HG2_PB_SVrefine2PB10Xhap12_4177:HG2_PB_SVrefine2Falcon2Bionano_2860:HG2_PB_SVrefine2Falcon1plusDovetail_9520:HG2_Ill_SVrefine2DISCOVARplusDovetail_10282:HG2_Ill_MetaSV_3971:HG2_10X_SVrefine210Xhap12_4187:HG2_Ill_tnscope_649;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4187:HG2_Ill_MetaSV_3971:HG2_Ill_SVrefine2DISCOVARplusDovetail_10282:HG2_PB_SVrefine2Falcon1plusDovetail_9520:HG2_PB_SVrefine2Falcon2Bionano_2860:HG2_PB_SVrefine2PB10Xhap12_4177:HG2_PB_SVrefine2PBcRplusDovetail_8877:HG3_Ill_MetaSV_4150:HG3_PB_SVrefine2Falcon1Dovetail_3588:HG3_PB_SVrefine2PBcRDovetail_2663;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0108728;ClusterMaxSizeDiff=0.0108728;ClusterMaxEditDist=0.0108728;PBcalls=12;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-5084;DistBack=14518;DistForward=-5082;DistMin=-5082;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=5:50234381-50239472;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3140.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:59:59:1|0:3:24:45:1:./.:0:0:0:0:0/1:45:25:0/1:348:192:5013:.:.
chr5	51280422	HG4_Ill_manta_1430	CTGGGCAAGTCAGTGAGTGAGGAGCAAATGAATGTGAAGACCTCGGACATTACTGTACACTCCTGTAGATCCA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_5832:HG2_PB_PB10Xdip_24094:HG2_PB_PB10Xdip_24093:HG4_PB_HySA_8598:HG4_Ill_svaba_7502:HG4_Ill_scalpel_5538:HG4_Ill_manta_1430:HG4_Ill_Krunchall_8479:HG4_Ill_GATKHC_9697:HG4_Ill_GATKHCSBGrefine_4099:HG4_Ill_250bpfermikitraw_8078:HG4_Ill_150bpfermikitraw_7746:HG4_10X_allpass_1108:HG2_Ill_svaba_7382:HG2_Ill_scalpel_5637:HG2_Ill_manta_1649:HG2_Ill_breakscan11_843:HG2_Ill_SpiralSDKrefine_13535:HG2_Ill_Krunchall_8187:HG2_Ill_GATKHC_9558:HG2_Ill_GATKHCSBGrefine_4020:HG2_Ill_250bpfermikitraw_8021:HG2_Ill_150bpfermikitraw_7501:HG2_PB_pbsv_5790;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7501:HG2_Ill_250bpfermikitraw_8021:HG2_Ill_GATKHCSBGrefine_4020:HG2_Ill_GATKHC_9558:HG2_Ill_Krunchall_8187:HG2_Ill_SpiralSDKrefine_13535:HG2_Ill_breakscan11_843:HG2_Ill_manta_1649:HG2_Ill_scalpel_5637:HG2_Ill_svaba_7382:HG4_10X_allpass_1108:HG4_Ill_150bpfermikitraw_7746:HG4_Ill_250bpfermikitraw_8078:HG4_Ill_GATKHCSBGrefine_4099:HG4_Ill_GATKHC_9697:HG4_Ill_Krunchall_8479:HG4_Ill_manta_1430:HG4_Ill_scalpel_5538:HG4_Ill_svaba_7502:HG4_PB_HySA_8598;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0137931;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0275862;PBcalls=5;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-72;DistBack=58977;DistForward=-70;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:51280421-51280496;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:31:1|0:2:27:26:0:./.:0:0:0:0:0/1:40:24:./.:.:.:.:.:.
chr5	52231771	HG3_Ill_scalpel_5724	ACAGAACACAGGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG4_Ill_Krunchall_8489:HG2_PB_HySA_10769:HG3_Ill_Krunchall_8000:HG2_PB_pbsv_5799:HG2_Ill_Krunchall_8196:HG2_PB_assemblyticsfalcon_21343:HG2_PB_assemblyticsPBcR_20622:HG4_PB_assemblyticsfalcon_20842:HG3_PB_assemblyticsfalcon_21274:HG4_PB_pbsv_5840:HG3_PB_pbsv_5628:HG3_PB_HySA_8896:HG4_Ill_MetaSV_4143:HG3_Ill_MetaSV_4152:HG2_Ill_tnscope_650:HG2_Ill_MetaSV_3973:HG4_PB_SVrefine2PBcRDovetail_2908:HG4_PB_SVrefine2Falcon1Dovetail_3511:HG4_Ill_manta_1431:HG4_Ill_SVrefine2DISCOVARDovetail_4256:HG4_Ill_GATKHCSBGrefine_4103:HG4_10X_allpass_1110:HG3_PB_SVrefine2PBcRDovetail_2669:HG3_PB_SVrefine2Falcon1Dovetail_3598:HG3_Ill_scalpel_5724:HG3_Ill_manta_1347:HG3_Ill_GATKHCSBGrefine_3876:HG3_10X_allpass_1164:HG2_PB_SVrefine2PBcRplusDovetail_8884:HG2_PB_SVrefine2PB10Xhap12_4184:HG2_PB_SVrefine2Falcon2Bionano_2866:HG2_PB_SVrefine2Falcon1plusDovetail_9529:HG2_Ill_manta_1650:HG2_Ill_breakscan11_845:HG2_Ill_SVrefine2DISCOVARplusDovetail_10290:HG2_Ill_GATKHCSBGrefine_4023:HG2_10X_allpass_946:HG2_10X_SVrefine210Xhap12_4196:HG4_Ill_Krunchall_8491:HG4_Ill_Krunchall_8490:HG3_Ill_Krunchall_7999:HG2_Ill_Krunchall_8195;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4196:HG2_10X_allpass_946:HG2_Ill_GATKHCSBGrefine_4023:HG2_Ill_SVrefine2DISCOVARplusDovetail_10290:HG2_Ill_breakscan11_845:HG2_Ill_manta_1650:HG2_PB_SVrefine2Falcon1plusDovetail_9529:HG2_PB_SVrefine2Falcon2Bionano_2866:HG2_PB_SVrefine2PB10Xhap12_4184:HG2_PB_SVrefine2PBcRplusDovetail_8884:HG3_10X_allpass_1164:HG3_Ill_GATKHCSBGrefine_3876:HG3_Ill_manta_1347:HG3_Ill_scalpel_5724:HG3_PB_SVrefine2Falcon1Dovetail_3598:HG3_PB_SVrefine2PBcRDovetail_2669:HG4_10X_allpass_1110:HG4_Ill_GATKHCSBGrefine_4103:HG4_Ill_SVrefine2DISCOVARDovetail_4256:HG4_Ill_manta_1431:HG4_PB_SVrefine2Falcon1Dovetail_3511:HG4_PB_SVrefine2PBcRDovetail_2908;NumExactMatchSVs=22;ClusterMaxShiftDist=0.101382;ClusterMaxSizeDiff=0.101227;ClusterMaxEditDist=0.22427;PBcalls=17;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=-434;DistForward=-317;DistMin=-434;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:52231772-52232121;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:98:1/1:1:43:2:43:./.:0:0:0:0:1/1:0:52:0/1:3:14:.:.:.
chr5	53176928	HG4_10X_allpass_1112	TAAAACCAGCTCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_426:HG4_PB_assemblyticsfalcon_20850:HG3_PB_assemblyticsfalcon_21281:HG2_PB_assemblyticsfalcon_21350:HG2_PB_assemblyticsPBcR_20630:HG4_Ill_Krunchall_8503:HG3_Ill_Krunchall_8010:HG2_PB_HySA_10777:HG2_Ill_Krunchall_8208:HG3_PB_HySA_8906:HG3_Ill_Spiral_6290:HG3_PB_pbsv_5632:HG2_PB_pbsv_5803:HG4_Ill_MetaSV_4144:HG3_Ill_MetaSV_4153:HG2_Ill_tnscope_651:HG2_Ill_MetaSV_3974:HG4_PB_SVrefine2PBcRDovetail_2909:HG4_PB_SVrefine2Falcon1Dovetail_3512:HG4_PB_HySA_8609:HG4_Ill_svaba_7520:HG4_Ill_scalpel_5549:HG4_Ill_manta_1433:HG4_Ill_SVrefine2DISCOVARDovetail_4260:HG4_Ill_GATKHCSBGrefine_4105:HG4_10X_allpass_1112:HG3_PB_SVrefine2PBcRDovetail_2670:HG3_PB_SVrefine2Falcon1Dovetail_3599:HG3_Ill_svaba_7481:HG3_Ill_scalpel_5728:HG3_Ill_manta_1350:HG3_Ill_SVrefine2DISCOVARDovetail_4313:HG3_Ill_GATKHCSBGrefine_3880:HG3_10X_allpass_1166:HG2_PB_SVrefine2PBcRplusDovetail_8888:HG2_PB_SVrefine2PB10Xhap12_4185:HG2_PB_SVrefine2Falcon2Bionano_2868:HG2_PB_SVrefine2Falcon1plusDovetail_9531:HG2_Ill_svaba_7399:HG2_Ill_scalpel_5650:HG2_Ill_manta_1652:HG2_Ill_SVrefine2DISCOVARplusDovetail_10294:HG2_Ill_GATKHCSBGrefine_4026:HG2_10X_allpass_948:HG2_10X_SVrefine210Xhap12_4199:HG4_PB_pbsv_5843:HG2_Ill_breakscan11_846:HG4_Ill_Spiral_477;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4199:HG2_10X_allpass_948:HG2_Ill_GATKHCSBGrefine_4026:HG2_Ill_SVrefine2DISCOVARplusDovetail_10294:HG2_Ill_manta_1652:HG2_Ill_scalpel_5650:HG2_Ill_svaba_7399:HG2_PB_SVrefine2Falcon1plusDovetail_9531:HG2_PB_SVrefine2Falcon2Bionano_2868:HG2_PB_SVrefine2PB10Xhap12_4185:HG2_PB_SVrefine2PBcRplusDovetail_8888:HG3_10X_allpass_1166:HG3_Ill_GATKHCSBGrefine_3880:HG3_Ill_SVrefine2DISCOVARDovetail_4313:HG3_Ill_manta_1350:HG3_Ill_scalpel_5728:HG3_Ill_svaba_7481:HG3_PB_SVrefine2Falcon1Dovetail_3599:HG3_PB_SVrefine2PBcRDovetail_2670:HG4_10X_allpass_1112:HG4_Ill_GATKHCSBGrefine_4105:HG4_Ill_SVrefine2DISCOVARDovetail_4260:HG4_Ill_manta_1433:HG4_Ill_scalpel_5549:HG4_Ill_svaba_7520:HG4_PB_HySA_8609:HG4_PB_SVrefine2Falcon1Dovetail_3512:HG4_PB_SVrefine2PBcRDovetail_2909;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0863787;ClusterMaxSizeDiff=0.0863787;ClusterMaxEditDist=0.0863787;PBcalls=18;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-305;DistBack=17955;DistForward=-293;DistMin=-293;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:53176929-53177246;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:1:15:0:14:./.:0:0:0:0:1/1:0:34:./.:2:14:.:.:.
chr5	53755531	HG3_Ill_svaba_7485	TGTCTCAAAAAACAAAACAAAACAAAAATAAAAAACAAGAGAGAGAGAAACATTACAAAGGAGTGGGGAGGGCATAGAGGCACTGCAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_5635:HG4_PB_HySA_8614:HG4_PB_SVrefine2PBcRDovetail_2911:HG4_Ill_svaba_7525:HG4_Ill_scalpel_5550:HG4_Ill_manta_1436:HG4_Ill_Krunchall_8508:HG4_Ill_GATKHC_9726:HG4_Ill_GATKHCSBGrefine_4110:HG4_Ill_250bpfermikitraw_8101:HG4_Ill_150bpfermikitraw_7769:HG4_CG_vcfBeta_3784:HG4_10X_allpass_1113:HG3_Ill_svaba_7485:HG3_Ill_scalpel_5730:HG3_Ill_manta_1353:HG3_Ill_GATKHC_9562:HG3_Ill_GATKHCSBGrefine_3883:HG3_Ill_250bpfermikitraw_7743:HG3_Ill_150bpfermikitraw_7561:HG3_CG_vcfBeta_3221:HG3_10X_allpass_1167:HG2_Ill_svaba_7403:HG2_Ill_scalpel_5651:HG2_Ill_breakscan11_847:HG2_Ill_Krunchall_8210:HG2_Ill_GATKHC_9591:HG2_Ill_GATKHCSBGrefine_4031:HG2_Ill_250bpfermikitraw_8046:HG2_Ill_150bpfermikitraw_7528:HG2_CG_vcfBeta_3362:HG2_10X_allpass_950:HG3_Ill_Krunchall_8014:HG4_PB_pbsv_5846;NumClusterSVs=34;ExactMatchIDs=HG2_10X_allpass_950:HG2_CG_vcfBeta_3362:HG2_Ill_150bpfermikitraw_7528:HG2_Ill_250bpfermikitraw_8046:HG2_Ill_GATKHCSBGrefine_4031:HG2_Ill_GATKHC_9591:HG2_Ill_Krunchall_8210:HG2_Ill_breakscan11_847:HG2_Ill_scalpel_5651:HG2_Ill_svaba_7403:HG3_10X_allpass_1167:HG3_CG_vcfBeta_3221:HG3_Ill_150bpfermikitraw_7561:HG3_Ill_250bpfermikitraw_7743:HG3_Ill_GATKHCSBGrefine_3883:HG3_Ill_GATKHC_9562:HG3_Ill_manta_1353:HG3_Ill_scalpel_5730:HG3_Ill_svaba_7485:HG4_10X_allpass_1113:HG4_CG_vcfBeta_3784:HG4_Ill_150bpfermikitraw_7769:HG4_Ill_250bpfermikitraw_8101:HG4_Ill_GATKHCSBGrefine_4110:HG4_Ill_GATKHC_9726:HG4_Ill_Krunchall_8508:HG4_Ill_manta_1436:HG4_Ill_scalpel_5550:HG4_Ill_svaba_7525:HG4_PB_SVrefine2PBcRDovetail_2911;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.0564972;PBcalls=4;Illcalls=24;TenXcalls=3;CGcalls=3;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=3;CGexactcalls=3;HG2count=10;HG3count=11;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-88;DistBack=40392;DistForward=-88;DistMin=-88;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:53755532-53755620;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:18:1|0:0:15:49:0:./.:0:0:0:0:0/1:26:16:./.:.:.:.:.:.
chr5	54081758	HG3_Ill_250bpfermikitraw_7746	TCCACCAGGGAGTCTCTCTGAAACAGGACATCAGCAGCGGAAGAGGCAAGGCACAGACAACCCAGCCCTCCATCAGTGGGCCATGCTGCTGTAGGCATGCCAGGCTCAGTGCCAGGAAATGCAAGGACAAAGCCAGCTGGCTAGAATTCA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_21360:HG3_PB_SVrefine2Falcon1Dovetail_3603:HG3_PB_assemblyticsfalcon_21294:HG2_PB_HySA_10784:HG3_PB_HySA_8914:HG3_Ill_MetaSV_4154:HG4_Ill_Cortex_2920:HG3_PB_pbsv_5638:HG3_PB_SVrefine2PBcRDovetail_2672:HG3_Ill_svaba_7491:HG3_Ill_scalpel_5735:HG3_Ill_manta_1354:HG3_Ill_SVrefine2DISCOVARDovetail_4316:HG3_Ill_GATKHCSBGrefine_3885:HG3_Ill_Cortex_2929:HG3_Ill_250bpfermikitraw_7746:HG3_Ill_150bpfermikitraw_7568:HG3_CG_vcfBeta_3222:HG3_10X_allpass_1168:HG2_PB_pbsv_5808:HG2_PB_SVrefine2Falcon1plusDovetail_9534:HG2_Ill_svaba_7408:HG2_Ill_scalpel_5657:HG2_Ill_breakscan11_848:HG2_Ill_SpiralSDKrefine_13551:HG2_Ill_MetaSV_3976:HG2_Ill_GATKHCSBGrefine_4035:HG2_Ill_Cortex_7047:HG2_10X_SVrefine210Xhap12_4201;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4201:HG2_Ill_Cortex_7047:HG2_Ill_GATKHCSBGrefine_4035:HG2_Ill_MetaSV_3976:HG2_Ill_SpiralSDKrefine_13551:HG2_Ill_breakscan11_848:HG2_Ill_scalpel_5657:HG2_Ill_svaba_7408:HG2_PB_SVrefine2Falcon1plusDovetail_9534:HG2_PB_pbsv_5808:HG3_10X_allpass_1168:HG3_CG_vcfBeta_3222:HG3_Ill_150bpfermikitraw_7568:HG3_Ill_250bpfermikitraw_7746:HG3_Ill_Cortex_2929:HG3_Ill_GATKHCSBGrefine_3885:HG3_Ill_SVrefine2DISCOVARDovetail_4316:HG3_Ill_manta_1354:HG3_Ill_scalpel_5735:HG3_Ill_svaba_7491:HG3_PB_SVrefine2PBcRDovetail_2672:HG3_PB_pbsv_5638:HG4_Ill_Cortex_2920;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0133333;ClusterMaxSizeDiff=0.0133333;ClusterMaxEditDist=0.0330033;PBcalls=9;Illcalls=17;TenXcalls=2;CGcalls=1;PBexactcalls=4;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=1;HG2count=12;HG3count=16;HG4count=1;NumTechs=4;NumTechsExact=4;SVLEN=-149;DistBack=4844;DistForward=21373;DistMin=4844;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:54081759-54081907;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3145.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:28:0|1:31:1:0:23:./.:0:0:0:0:0/1:25:13:./.:.:.:.:.:.
chr5	54808306	HG3_10X_allpass_1170	AAAAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_5812:HG4_PB_assemblyticsfalcon_20865:HG4_PB_pbsv_5851:HG3_Ill_svaba_7496:HG2_Ill_svaba_7413:HG3_PB_pbsv_5642:HG4_Ill_svaba_7534:HG4_Ill_manta_1438:HG4_Ill_GATKHC_9738:HG4_Ill_GATKHCSBGrefine_4116:HG4_Ill_150bpfermikitraw_7780:HG4_Ill_Spiral_478:HG3_Ill_svaba_7495:HG3_Ill_scalpel_5738:HG3_Ill_Krunchall_8025:HG3_Ill_GATKHC_9571:HG3_Ill_GATKHCSBGrefine_3889:HG3_Ill_150bpfermikitraw_7574:HG3_10X_allpass_1170:HG2_Ill_svaba_7412:HG2_Ill_scalpel_5659:HG2_Ill_GATKHC_9601:HG2_Ill_GATKHCSBGrefine_4040:HG2_Ill_150bpfermikitraw_7533:HG3_Ill_Spiral_6299:HG2_Ill_Spiral_427;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7533:HG2_Ill_GATKHCSBGrefine_4040:HG2_Ill_GATKHC_9601:HG2_Ill_scalpel_5659:HG2_Ill_svaba_7412:HG3_10X_allpass_1170:HG3_Ill_150bpfermikitraw_7574:HG3_Ill_GATKHCSBGrefine_3889:HG3_Ill_GATKHC_9571:HG3_Ill_Krunchall_8025:HG3_Ill_scalpel_5738:HG3_Ill_svaba_7495:HG4_Ill_Spiral_478;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.070922;PBcalls=4;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-70;DistBack=-4;DistForward=-14;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=35;REFWIDENED=5:54808299-54808403;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:28:0|1:20:1:0:25:./.:0:0:0:0:0/1:11:10:./.:.:.:.:.:.
chr5	55428997	HG3_Ill_SVrefine2DISCOVARDovetail_4325	ATGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCACAAGGTCGGGAGTTCGAGACCAGCCTAGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAACTAGCTGGGCATGGTGGTGCATGCCTGTAATCCCAGCTACTGGGGAGACTGAGGTAGGAGAATGGCTTGAACCTAGGAGGCGGAGGTTGTAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGTGACAGAGGAAGACTCCGTCTCAAAAAAAAAAAAAAACAATTAATTAATTGGATACAATTGATGTCTACTGACTACTTCATCTAACAGCAAAATACACATTTTTAACAAGCTCACATGGGACCTTCACCGAGATAGACTACAGTCTGGGCCATAAAACAAACCTTAACAAAAGTGAAAGAATAGAAATCATACAATGCAGGCTTTCAGACCATGGTAGCATTAAACTACAAATCAACAACAGACAACTGGAAAATTTCTGAACATGTGGAGATTAAACAATATAAGTAACACATGGTTCAAAAGAAGAAATTGCAAGATAAATTAAAAAAATACTTTGAACAAAAGGAAGATAACATCAAAATTTGTGGGATGTAGCAAAAACAATTTCTCAGAAGAAAATTTACAGCTTTGAATGTATATATTAAAAAAGAAGAAAGATCTAGAATCAATTATATAAGCTTACATCTTAGGAAGCTAGAAAAAGAAGAGCAAATTAAATCCAAAATAAGCAGAAGAAAAGAAAAAATAAAAATTAGAGAAGAAATCAATGAAGTAGAAAACAGAAAATCAATAGAGAAAATCAATGAAACCAAAAGCTGGTTCTTAGAAAAGATTAATAAAAGTGATAAGCCTCTAGCCAGGCTAGAAAAAAACAGAGGGAAACAAATTACTTAATATCAGAAATGAAAAAAGGTACTTCACTACAGATCCCATGGACATTAAAAGAATGATGAAGAAATACTTTAAACAACTCTATTTTCACAACTTGATAACATATTTGAAATGGACCAATTCCTTAAAAGACACAATCTACCAAAACACCCACAAGGAGAAATAGATAATCTGAATACGTTTATGTCTATTAAAGAAACTGAATAGGCTGGGTGCGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4206:HG3_10X_allpass_1171:HG2_10X_allpass_951:HG2_PB_SVrefine2PB10Xhap12_4193:HG2_Ill_SVrefine2DISCOVARplusDovetail_10303:HG2_PB_HySA_10793:HG4_Ill_Krunchall_8524:HG3_PB_pbsv_5647:HG2_PB_pbsv_5817:HG3_PB_HySA_8928:HG4_PB_pbsv_5853:HG4_Ill_GATKHCSBGrefine_4117:HG4_10X_allpass_1114:HG3_Ill_MetaSV_4157:HG2_Ill_MetaSV_3979:HG2_Ill_GATKHCSBGrefine_4042:HG4_Ill_MetaSV_4146:HG4_PB_SVrefine2Falcon1Dovetail_3521:HG4_Ill_SVrefine2DISCOVARDovetail_4270:HG3_PB_SVrefine2PBcRDovetail_2677:HG3_PB_SVrefine2Falcon1Dovetail_3609:HG3_Ill_SVrefine2DISCOVARDovetail_4325:HG2_PB_SVrefine2PBcRplusDovetail_8893:HG2_PB_SVrefine2PB10Xhap12_4192:HG2_PB_SVrefine2Falcon2Bionano_2873:HG2_PB_SVrefine2Falcon1plusDovetail_9539:HG2_Ill_SVrefine2DISCOVARplusDovetail_10302;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4206:HG4_PB_SVrefine2Falcon1Dovetail_3521:HG4_Ill_SVrefine2DISCOVARDovetail_4270:HG3_PB_SVrefine2PBcRDovetail_2677:HG3_PB_SVrefine2Falcon1Dovetail_3609:HG3_Ill_SVrefine2DISCOVARDovetail_4325:HG2_PB_SVrefine2PBcRplusDovetail_8893:HG2_PB_SVrefine2PB10Xhap12_4192:HG2_PB_SVrefine2Falcon2Bionano_2873:HG2_PB_SVrefine2Falcon1plusDovetail_9539:HG2_Ill_SVrefine2DISCOVARplusDovetail_10302;NumExactMatchSVs=11;ClusterMaxShiftDist=0.209056;ClusterMaxSizeDiff=0.209056;ClusterMaxEditDist=0.209056;PBcalls=13;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1137;DistBack=20658;DistForward=-857;DistMin=-857;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=288;REFWIDENED=5:55428998-55430422;PctSeqSimilarity=0.9007;PctSizeSimilarity=0.9974;PctRecOverlap=0.8142;SizeDiff=-3;StartDistance=-209;EndDistance=-212;GTMatch=0;TruScore=90;MatchId=3147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:4:85:1/1:3:30:0:23:./.:0:0:0:0:0/0:39:0:0/1:26:61:1205:.:.
chr5	56131111	HG3_Ill_250bpfermikitraw_7765	AGACAGGAAGGCAGGGAAGAGGAGACAGGAAGGCAGGGAAGAGGAGACAAGGAGGCAGGGAAGAGTT	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_8068:HG3_PB_pbsv_5653:HG2_PB_pbsv_5821:HG4_Ill_SVrefine2DISCOVARDovetail_4274:HG4_Ill_GATKHCSBGrefine_4120:HG4_Ill_250bpfermikitraw_8127:HG3_PB_SVrefine2PBcRDovetail_2680:HG3_PB_SVrefine2Falcon1Dovetail_3614:HG3_Ill_SVrefine2DISCOVARDovetail_4328:HG3_Ill_GATKHCSBGrefine_3895:HG3_Ill_250bpfermikitraw_7765:HG3_Ill_150bpfermikitraw_7589:HG2_PB_SVrefine2PBcRplusDovetail_8896:HG2_PB_SVrefine2PB10Xhap12_4196:HG2_Ill_SVrefine2DISCOVARplusDovetail_10306;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8068:HG4_Ill_SVrefine2DISCOVARDovetail_4274:HG4_Ill_GATKHCSBGrefine_4120:HG4_Ill_250bpfermikitraw_8127:HG3_PB_SVrefine2PBcRDovetail_2680:HG3_PB_SVrefine2Falcon1Dovetail_3614:HG3_Ill_SVrefine2DISCOVARDovetail_4328:HG3_Ill_GATKHCSBGrefine_3895:HG3_Ill_250bpfermikitraw_7765:HG3_Ill_150bpfermikitraw_7589:HG2_PB_SVrefine2PBcRplusDovetail_8896:HG2_PB_SVrefine2PB10Xhap12_4196:HG2_Ill_SVrefine2DISCOVARplusDovetail_10306;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0151515;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.030303;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=21391;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=129;REFWIDENED=5:56131112-56131306;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3148.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:35:0|1:32:2:0:30:./.:0:0:0:0:0/1:13:13:./.:.:.:.:.:.
chr5	57323476	HG4_Ill_SVrefine2DISCOVARDovetail_4279	TTCTTCAATCTCCAACTGCATTTTGGAAAATATCTCCACTCTGGTTTACAAGTCCTTATATCGATGGTGGCTCTGGACCACTACCTGTTGACTATGGTGTATTTACATATCATGGTTCTAGGTATTATATTTGCCTACTGGACTGAAATTTCTTCCAACAATAGGACCAAGACTTTTCCTTAATGGCTTCTACTCTTAACTGGTCTTGTCTTGCTATTTTTAAGAACATGAGCTTAGCTCAGCAAAGGAGAGCAAACTATGCATTATTATTATTATTATTATTTTGAGACAGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCTCAATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTGCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGACAGTCTTGATCTCCTGACCTTGTGATCCACCTGCCTTGGTCTCCCAAAATACTGGGATTACAGACGTGAGCCCCCACACCTGTCCTAAACTATGCATTATTAGTACCATACCAGGATTCTAAAACAGGTATACTTTACCTCTTTGTATTAGCCATTTAACTTCTGCTTTTCTGGCTTGATGAACCCAGGTGACAATTGGACTTAAACTATTACTCTATTTTTGATCCCTATGAGACCCTCAGATATAATTCAGACAATCTGGTTCTGAAGGTTTCTGCCTCAACTCCATGAAGGTGATGGCTGGTCTAGTGCTAGGCCTGGATGTCCTAGCTCCTTCACAGCTGACCATGTATGCTTTCTCACCACTGTTTCACTAATCTCTTATTCTGTTTCTGGCAAATAGTGAGGACTTAATAATGATTTGCAAATAAATCAATAAAGTCCATTGTGGGTAAGAATAATATGTCTGCCTAGGTCTCAAGATATAGCTTAGTTCCCCACCACATCTTTTGTACTTTCCTTTTAAGTCATGTCCTGCCTTGACTTTATCAAATTTATCTGCACATAAATGTAATTGGTACTGTGGTATTCCTTCAAAGAGGGACTGGAAAGACTAATTGCTGAAAAATTTGAAGACATTAAATAACCAAATATTTATTTGTTTTGCCTTGTTTAGACCAATCATCTTCCTGATTTTGCTCAATTCTTTTTTATTTAAATGCTTGCTAAAATGTGAACTCATGCAACCTGTCCAAATTTTGTCCATTTCTGAAAAATGGCACCCATCTGCTCCTGTAAACAAGCATTGTGTCTTTAAGACTTCCGATTGTTCTAAATACACAAGGACACAGTGTTTGTTTGATGTACAATGTTTATAAAATTGAGGATAGCACATAGAACAGTTAAGTTTTTTGCTTTCCCATTACAACATAAACTTCTTGAAGACATAGCATTATCCACAGCTGCTAACACAATGTTTGTGCAGCATAACTATTTGTTACTGATTATTTTTCTAATTCATTATTTACATAAGCATTTCCATAAATACCTGTAATATTAAATAACTTTCAAACTTTCAGCAATTGGATTGCATTTATGCTTTGTTGGGAGAGTTAGAATATAGTAGCAGCCCATGTCTCCAAACCAATTGGCACTTCTCAATGAATTGAAAATATCAGGAAGGGAAATCTTAAATAATATGTATATTTTTACTAATTTTGTTTTAATTAAAACACTTGCAACAGAGAACCACTAAGATGTAATTTATGCTTTGTTTCAAAGGGTTTAGAATAGTTGACATAGATAACTAAGAACTAGTTACACAGTTCTTGAGTTCAGCTTCTAACCATTACATAATAATTGGTGTAGGACTTGACCTTTCATGAAAAGCAATCATAAACCTGGACACAATATATGACCCAATGTTTTTAGGCATTGAGAAATACAGAAGAGGTCTGTAATTCCTGAGAATGGAAAAGTAGTGATTATCCCCACATCTACTCCAGTTGCCTGCCTAGGGCACATTCCAACCACGGTGCTGGGGGCTGATGACCAAGAAGACCACAGAGGTCTCACCGAGCTGAGAAGGCAGGTATTGGAGAGTGTGACTGCTGAAGTGGCAGGAAATTGAGGGTCAGGGTACTGGAGATGGGGAAGCTGTATGGAAGCGAAACCCAAAAGTCTTTTCCCAACAGATACTGGACATGAGTTGGGTGTGCAGAGTGAGTACCCTAAAGTCGGGTTGATATAATCATTTGACTTGGAAAATTACACTCATTGGTGTAGGTGCCTCATCCAATCAGCTGGTGGACTCAAGAGTAAAATTTGAGGTTTCCTGGAGAAGAGGGATTTCTGCTTCAATACTGGAACATAGAAATTTTGTCTTTCCAGCCTGTAAGCCTACACTACAGATTTTGGACTGGCTGGCCCCATCATCATATAAGCCTATTCATTAAAATAAATCTAGGTCTAGATGTATATTCTATTGGTTCTGTTTCTCTGGAGAATTTTGACAGATGCAAGGTCTTTGGATGGGCTGTGCATGTACTGGGTAGGACTCTTTGAAGTCTAGCAGAGGCAGTTGCTTTAGGGCTCTGAGATTAATGGAGATTCAGGAAGTTGTACAGCCCTGGGAATTGCAACACAGCCAAAACTGACAAACTTCAATGAGACCCTGAAGCATTCAGTTTAAACCCCAGAAAGGCCACACCTAATAAGTGAGAAACAGTCCATGGAGGAAGGGTCATGTACTAGAAATAAGGGAGGGGAAAAAAACAGAACTTTCCTAAAAAATAAGTACATAAAAACAAAGCCAGACTGGATCAAACCTGCCAATAATTTAATTGCTTGCCAGGACAAAAATAAATAACTTTTTAAATAAGGATGACATAAAATGACTCCATGCAGTGTATCATTCACATGTTCAGCTTACAGTCGTAACAGAATAGAGTTAAAAAAAGTAGTCAGTGGAACTCACTTAAATGTTAGAATATGACAACAAAAAATTTAAAAACATTTATTATGGAAGCTTTCAAGGACATAAAGGAAGAAATAGACACAGTAGGTGACCAGATAGGGAATCTCATTGAAAAAAATGAACTATAAAAATCAAAGACACATTCTAAAACTGAAAAATACAAACATTTTAAATTTAAAAAAATTACAAGTTGAGCTTAAAAGCAGATTGAAAATGGCAAAAGAGTAAATCAGTAAACTTTAAAGCAAATAAAGAGCAAGTCTTTAATTTGAAGATTAAAAAAAAATAAAAGTGGACAAGACTTAGCGTAATTAAACATACCAGCAGCTAAATCTCAGGAAAGAAGCAAATGGGGCAGAAAGGAAATACTCCCAACTTCCTCAATTTTTATGGCAAATGTGTAGATCCAAGAAGCTCAGGAAATCCCAAGCAGAATAAGAACAAAGAAATTAACAAATAGGTACATCTTTGCCAAACTGTTGAAAATAATAAATAAAGAGAAAATATTAAAAGCAACTAGAATAAAAAAGATGATAGATAGATACAGAGAGATAGATAGATATAGAAATAGAATAGCTATGGAGGCCAAGAGTCAATGTAACATCTTTAAAGTGTCTCCCCTTCCAAAATAAAAGTTGTCTACCCTGAATTAAATATCCATTAAACTACTTCTAAAAATTAAGGTCCAATATATACCTATGCAGAAAAAATCTTAAGATGATTTACTTCCAGCAGATTTTTACTAAAAGAAATGTTAAAGGAAGTTCTTCAGACTGAAGGAAATAACATAGGGAAAAAACAAAGAGAAGAAAAGAAGCAAAAGAAGAATAACAATGAACAAATAAAAACAGATTTAAAAATAGAGAAAACAAATAGCTGAATGGTATACTTAAATCCAACCACATTAATAATTAAAATTACAAGTAGAAATTTTCAGAAGGAATAAAAATGCAAGAGTATGCATTCTCTAAAAGGATAGTATTAACAGAACTGACTAAACCTTCAAAAAAGACATTTGTTCCATGCAAATATTAAGCACAGTAGGACTAAAGTGGTCCTATTAGTAGCAGTCTAATTAGACATCAAGACAAGCAGTTTTACCAGAGATAAAGTGGGATAGTTTAAAGAAAAGGGCAGTTTACTGAAGCATAGCAACTGTAAATATGTATGTACCTAAAAATAGAGCTTTAACATACATAAATCAAAACTGACAGAAATAAAGGGAACATAGAAAAATTCACAGTTATAGCTAGATATTTTAAAACCTCTGTTTCTGTAATTAATAGAAAAGTAAACCAAAAAATTAGTAATAACAGAGAAAACTTGAATACCATCAACCAACTTGACTAACTGATATTTGTAGAGTACTACACCCAACTTGTGAGTGTATATATATTTTTTATCAACAACACATGGAAAATTTACCAAGTTAAACTATATGCTGGGCCTAAAACTTCACAAATATGACAGGCTAAAATGTTACATCATATGTTCTCTAATCACAACAAATTTAAGTTGAGAAGCTATAATAATAAAATATTTAATAAATTTAAAAATTAAATAGCACATTTCTTAACCCATTGGTCAAAGAGAAAAATCACAGGGAAAATTTTAAAATATTTTCAATTGAATTATGAAAATACAGCATTTCATAAGTGCTGGGATGTAGCTAAAATGGTATTTAGAGATATTTATCATTTTAAATGCCTTTTTTCTAATATAGGCAATACCTATATAATACAGGTAATATAGCTAATATAGGCATTATACAATCAATAACCTTTCATTAAATTGATTCCTAAGTATTTGGTATTTCTGATGCTACTGTAAATGGTATTTTTAAAAGTTAAATTTTCAATTGTTTATTATATAGAAATGGCCTCTGTAAGGATTGAACAAGTAAGTCTTATCTAGTAAGTTTTAGTACTCACAGTTTTATTTGGAAATGAAGTGCTGCTTCTTTTAAACTAGTGTGTGGCAAAAAATATTTTTACAGCAGTAGAAAAATCAGTTCTTCAGCTTCTATATATGAAGAAATCTCTACCTCTTGTATAAGTCACTCAGGAGTGAAGCTGGAGTCTAAACTCAGAGAAAGATTCAGAGCCCCTATAACAACATAACTTGTAAAAGTTATCTGATCTAAACTACTCCAGGTAGAGCTGAATTCTCCTCCCTACAACAAAATAATTAAAGATGGTTAAAAGGCTTAGAATTCTCTTCCTAAATTTCATATGTACAACATAAAATAGAACATCAGATTTTGATGGATGTTTTATTTACTGTTTTTTTCCCATCAGGTAAATGAAGTGAGATTACAAATTGTCATGTCCACTATCATTGTAACATCAATTCTGTGATGGGAAGCACCTCAGAAGAATTCTGCTTCAGAACCGTGTTGCTAAGCATGTAGGACATTACTGGGCTTGATCACAGAGAAAAGTGAGTTCCATGGAAGGTTTGAGTTACAGATGCATTCTAGGTCTAAAACCACCTAGAATACCTAAAAGAATTCTGCATTTCTTTAAGTTTGCTTCACTCTATACTGCACAGTTATAAAATTTAACCTAACACCTCAGGGTGGGCAGAAATGGGCAGGGCATCTTTATGAACCATGACTTGCTTCTCGGTGTCATCTGAGATCTACGAAGAGCACAGGGAAATCTGACAGGAAGCTGTCAGCCTACTTCTCATCTTAATTAACGTCTTATATGACTGCAGTTTTGTTCATGACTGTCACACTGTGTTGAAAAGATTTCAGAAGAAAAACTTATTGCTTGTAGACCTTAGATTTGAGCAAGTGAGGGTACAAAGAATTGGGAGTTATCCCAACTCATCAAGCCTAACCTCTTGCTAATACCTTAAAAAATTGCATTTTGTTTTGAAGCTAGAAAGGCATAAAAATGTCCTTCACTACTGTTCACGTAAGAAAAAAATATGGCAAATGTCTGGGTTATTGAACAACCAGGAAAGTTAACAACCTTGATAAAATTCCAATGTGTTCATTAGATTTGGACATCTTAAAATATACTGGCAATTTCACTTGGATCACATTTTTGTCTTGCTATGCACCCCCCAAAATGTTGTTGTGTGGTCATTCCTAGCACTGCTGAAATGTAATCTCCTATTAATGTAGAGGATGCTGAGTTATGGCTTTCCTGAAATAAGTTGGAAATAAATGATATTCTGCAGGTGCCTGTTATTTATTCTCATTCAATATAAACTACCAGGACAAATGCACTTACCTGAGAGCAATTTTACAGGCTAAGTAAAAGTCATGTAACTAATTTAGTCAAAGAATTTTGTACAACTTTTGGTGCTTTCCACTTTGCTTGGCTATTTCATAAACCTATTGTGAATTGTGGAATTCATAGTTGATGGAATATTTTCAAGAACACATGTTGTCTCTCTGCAAGCAAAAGCCGTATTAAGTAGAAAGCATTCTCATTGTTCTATATTGCTAAGGCCAAGACTGCTTCTGCTTGCAAGAACACTGGCCGTTTATGTTCTTGTAAATGCACCCCATCTTTTCCCTTATTTTGCATTCTGTTTCTAAATTGGAGGCTCCAATGACACAAAACAGCAACATTTCCTGTGATTCCTCCCTTAGAACAAAAAACAAATGAAAAGCCAGAAAAAAAAAGACGTTAGAAAAATTACAAGACAAGCAACTTGGTAAGCCTAAGCAAAGAACTTCCCTTGCCTACTGACTCAGAACTTACAGCAAAATTTCTTAAACTACTTTAAATATCACCAGAAGTGATGGGACACAACAGGTTGTTTTGGGTGGTCTACTCCTGCAAAAGGAAGTGATAGGGAAAAGGGAAGAGACATAGAATCATGCTGTCAAATTTGAGTTGATGGCCTGTTACAGTATTTCTGTGATGCTCCTGCAGTGCCCACAATTTCTCTGAAGCCCCTCCAAACCCACCTCCCACAGAAAATACTCTCTGAATCTCTCTGACCTACCGAACTCACTTCCCCATGAGTGTGGCCACTGCCTGCCCCAGCCCCTTGGTCCTAGGAATCCCTGCATGCTGACTATTTCTTAGGAGCACTTAGTGTATGAGAATTCCAAACACGTAGGCCACTGGTAGTTTGGAGTCTCAGTGAATGTTATGCCCCTTTTTCCTCTGTCCTGTCTCCTCCCCTAGAAGTAAGCTCCACAACAAGAGGAAACTTATCCTATGGACCTAGCTCGATTCCTTTCTTCTTTTGGTCACAGACAATACTCAATAATGCTTATAATTTGAAGAAAAGAATCATAAGCAGCATTTATTAAAGATGCAAATTCTCAGGTCCCACTCCAGTCTTATGAGTCAGAATTTCTGAGAGTGGGACAAAGAATGGGCTTTTTAAGAAAAATCTCCTGGTGATGCTCAGTCATATAAAAGTTTAAGAATCACATTCTCTTCTATGGTTGCTTTCAGGACTTGCCTTCTGAATTGGAACTATGCCACAACCAGAAAATAGACACGGAAGATTAATTTTTCTACGATCACTTTCAACTCTTGCCTTCTAAAAGTGTAGAGTCAAAGACTCTACAAATTTCTAACAAGTCCTTCTTTCATTCCAAAGAGAGAAAGATTGTTCTAGTGTGTAATCTGATCCAGGGGGTTTAGAGGAATCAGGGTAATAGAGAGTTGTTATAAACAGCATACATAGATTATCAATTTTCAAGGAAAATAAATTCAAATATACTTATGACAACAATATTTCTCTGATGTCCAATTTCTCAGAAAAAAAAAACCAACCAAGCAAAGCACCTGACCCTTAGGAGACATTTAATAAGTGTTGAGTAAATGAATATATACATGAAAGAATTATTTATTCTCTCAGGATCAGTATTATATTCTTGAATTATCATTCTTCTGCAAATATAAAGGAACGTCAGTGTAATTCGACAAAATGGAGAATAAACTAGATTTCACTGCAATAATTTATTAAACCATAGAAACTATTTTGTTTTTTAACTTATTTTCTGTGACAATTATGTAATCTCCTTTGGTATAATGTTTCCACCTCTAAAAATTTAGAGTACATGGTAATAAAAATAAATTAATATTTTTAGAAGCTATGTGGCCTTCGTTCGTCTTGTGCTGCTAGTCGAAGAATATCTGAGACTAATTTGTAAAGAACATAAATGTATTTCTTACAGTCCTGAAAGCTAAAAATTTCAAGATCAAGATGCCAGCATCTGGTGACATCTTCTTGTTATGTCTGCATGTGGTAGGAGAGCAAGAGAGTGCAAACCTACACCTGCAAGCCCTTTTAATAACAGCATTAATCCATTCATAAGAACACAGCCCTCGTGTCCTAAACACCCAAGGGCCCACGCCCCAGCACTGAACATTAGGGTTTAAATTTCAAACACGAGTTTTTAAGGTGGCAAAAACTTTCAAACCATAGTGCGTGCGCACACACACACACACACACACACACACACACCCTCCATACACCCATATATATGTGAAGAAATATTTGCTGTAATGTATCATTTATCATGACTTTTTTATGATGTGAGTCTCTTAAAAGATTATTTTGAAAGTTCTATGTAACCTAGTATATATTAGTTTTTCTTTGTTTTCTTCATCCTCACTCTTGCTTATTTGGCAATGATCATCTCTGTTTCCTCTCGTCTGGCATTACAGGTCAAAAGAAAATAGTTGGTTAACGTCAATTTTACAGAAAGACTTCAATATCTGTAACTACATGTCTTTTAACTATTGGAGGTGATAATAAATTGCTGATATCAGTTCAAAGAACAATGTTCCCTATCAGTCAAAATCTGAAATGGCTTTAGTAAAAATTGTGAAGTTTATTCCAAAGTATGTACGAAAATGCAGAAGACACAGGCCAGCTAAGGAAAACTTGAAGAGGAACAAAATTGGAGGATCCACACAACCAGATTTTGAGATCTACTTTAATCTTCAATAATTAAGGATGATCTGATACTGGCATGAGAACAGAGAAGTTGACCAATGGAGCAGAATAGAGAATATGGCATATACAATTACTTGCTTTTGAAGAAAGGAGCTAATGTAATTAAATAAGGAAAGGGAAGTCTTTCTATACATGGTGTTGGAGCAACCAGGTATTTGTATTAAACAATGAGCTTTGACCTCTCCCTCATAGCATACACAAAACTTACTTAAAGATAGATAAAACAAGAAAGCTTCTGAAATTATGCTCTTAATATTGTAGCCACTAAACACGTGTAGCTATTGAACATGTCAAATGCAGTTAGTCCAAATTGAGATGTGCTGTGGGTCTAAAATATACATAGATTTTTTTTAAGAAGTACTTAGTACACACACAAAAAAGAAAACTAACTCATTAGTTATATCTGTATTGACTAGATTTTGAAATTACAAAATTTTGATATCTTGGGTTAAACAAAATAAATTATTACAATTAATTTATCTGTTTCTTTTTACTTTTGTTTACAGTGACTACTAGAAAATTTATAATTATACCTGTGGCTTATTTTTGTGACTCACATTTTACTTCTACTGGACAGTGCTGCTCTAGAAGAAAATAGGAAAATATCTCAAGGTCTTCAAGGGAGACAAGGATTTCTAAAACAGGACACACACACACGCATACAAATAGTAATCATACGGAAAACAAAAATCGCCACTTGGACTTCATCAAAATTAAAATTTCTGCTTATCCAAAGACATTATTAGGAAAGTGAAAGGGCAAACCATAGACTAGGAGAAAATATTTTATATGCATACCTAACAAAAGACTTGGATACAGAATCCATGCAAAACTATAAACCAGTAAGTAAGAAAAAGACAAGTAACAATAAGGGAAACATGAGAAAAAAACTTCCCACAAAAGAAATAGGCATCTCTCACAGAAGTTACCAGAATGGTATATGAAAAACTGCTTTAACATTATTGCTTGTCAGGAAAATGTAAATGAAAACCACAGTGGGTCTATGCAAACATAGTAAACTCTTTTTGACAAAGGCACAAAAGCAATTCAATGAAGAAAAGACATCCTTATCAACAAATGACCTATCAAATGGTACTGCAACAATTAAATGCTGTGGTAGGTAAAACAATGGCCTTTAAAAATGTCCATGTGCTAATTCCCAGAACCAGTGGATATGTTAGGCTATACAGCAAATGGCAATTATGGTTACAGATGGCATGCTAAGTTCCTAATCATATGGCATGATTAGTGATTAGCAAAGGATATTATACTGTATTATCTGGGTGGGACCAGTATAATAAACAGTTCCTTAAAAGTGGAAGTCGGGTAAGAGAGGGAGCACCAGAGACATGCAGCCTGAGGAAGACTGTGCATGACATTTCTGGCCTTGAAGATGGAAGAAGGGG	T	20	PASS	ClusterIDs=HG4_PB_HySA_8637:HG4_10X_allpass_1115:HG2_10X_allpass_952:HG3_10X_allpass_1172:HG3_PB_SVrefine2Falcon1Dovetail_3617:HG4_PB_pbsv_5859:HG4_Ill_SVrefine2DISCOVARDovetail_4279:HG4_Ill_MetaSV_4149:HG3_Ill_SVrefine2DISCOVARDovetail_4333:HG3_Ill_MetaSV_4161:HG2_PB_pbsv_5823:HG2_PB_SVrefine2PBcRplusDovetail_8898:HG2_PB_SVrefine2PB10Xhap12_4199:HG2_PB_SVrefine2Falcon2Bionano_2877:HG2_Ill_MetaSV_3983:HG2_10X_SVrefine210Xhap12_4211:HG3_PB_pbsv_5656:HG2_Ill_tnscope_652;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4211:HG2_Ill_MetaSV_3983:HG2_PB_SVrefine2Falcon2Bionano_2877:HG2_PB_SVrefine2PB10Xhap12_4199:HG2_PB_SVrefine2PBcRplusDovetail_8898:HG2_PB_pbsv_5823:HG3_Ill_MetaSV_4161:HG3_Ill_SVrefine2DISCOVARDovetail_4333:HG4_Ill_MetaSV_4149:HG4_Ill_SVrefine2DISCOVARDovetail_4279:HG4_PB_pbsv_5859;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0016496;ClusterMaxSizeDiff=0.0016496;ClusterMaxEditDist=0.0016496;PBcalls=8;Illcalls=6;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-10302;DistBack=4353;DistForward=-10300;DistMin=-10300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:57323477-57333780;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3149.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:58:62:0|1:54:2:0:31:./.:0:0:0:0:0/1:58:16:0/1:354:180:10321:.:.
chr5	57679986	HG3_Ill_SVrefine2DISCOVARDovetail_4337	TAAAAACAAAAAACACGGAGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCAATAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTGTGTGTGCGCACCGTGCGCAAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGTACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAAGAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACTAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTCAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCAACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACTGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACTTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAAGAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAACCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAACCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGTCTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCTTAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTGAGAGTATAATAAAAAAAAAAAAAAGAAAAAAAAAATAAAGAAAATGTGGTATAAATACACAATCAAATACTAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3619:HG4_PB_pbsv_5860:HG2_Ill_Krunchall_8237:HG4_10X_allpass_1116:HG3_10X_allpass_1173:HG2_10X_allpass_953:HG4_Ill_Krunchall_8544:HG2_Ill_Krunchall_8236:HG2_PB_assemblyticsfalcon_21390:HG2_PB_assemblyticsPBcR_20678:HG4_PB_assemblyticsfalcon_20891:HG3_PB_assemblyticsfalcon_21330:HG4_Ill_MetaSV_4150:HG4_Ill_GATKHCSBGrefine_4123:HG3_Ill_MetaSV_4162:HG3_Ill_GATKHCSBGrefine_3896:HG2_PB_pbsv_5825:HG2_Ill_MetaSV_3984:HG2_Ill_GATKHCSBGrefine_4048:HG2_Ill_tnscope_653:HG4_Ill_SVrefine2DISCOVARDovetail_4280:HG3_Ill_SVrefine2DISCOVARDovetail_4337:HG2_PB_SVrefine2PBcRplusDovetail_8899:HG2_PB_SVrefine2PB10Xhap12_4202:HG2_PB_SVrefine2Falcon2Bionano_2879:HG2_PB_SVrefine2Falcon1plusDovetail_9543:HG2_Ill_SVrefine2DISCOVARplusDovetail_10310:HG2_10X_SVrefine210Xhap12_4212:HG4_PB_SVrefine2Falcon1Dovetail_3528:HG3_PB_pbsv_5658:HG3_PB_SVrefine2PBcRDovetail_2684;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4212:HG2_Ill_SVrefine2DISCOVARplusDovetail_10310:HG2_PB_SVrefine2Falcon1plusDovetail_9543:HG2_PB_SVrefine2Falcon2Bionano_2879:HG2_PB_SVrefine2PB10Xhap12_4202:HG2_PB_SVrefine2PBcRplusDovetail_8899:HG3_Ill_SVrefine2DISCOVARDovetail_4337:HG4_Ill_SVrefine2DISCOVARDovetail_4280;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00475137;ClusterMaxSizeDiff=0.00475137;ClusterMaxEditDist=0.00475137;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6109;DistBack=5962;DistForward=-6095;DistMin=-6095;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:57679987-57686110;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.999;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=3150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:110:1/1:1:23:0:26:./.:0:0:0:0:1/1:0:35:1/1:0:420:6178:.:.
chr5	57777239	HG4_Ill_SVrefine2DISCOVARDovetail_4281	GGAGTGACAGCATGTGTAGGGGTGACAGTGAGGGGCAGCATGTGTAGGGGTGACAGTGAAGGACAGCATGTGTAGGGGTGACAGTGAGTGACAGCCTGTGTAGAGGTGACAGTGAAGGACAGCATGTATAGGGGTGACAGTGAGTGACAGCATGTGTAGGGGTGACAATGAGGGATAGTATGATTAGAGGTGACAGTGAGGGGCAGCATGCATAGGGATGATAATGAGGGACAGCATGTGAAGGGGTGACAGTGAGGGGCAGCCTGTGTAGGGGTGACAGGAAGTGACAGCATGCGTAGGGGTAACAGTGAGGGGCAGCATGTGTAGGGGTGACAGGAAGTGACAGCATGCGTAGGGGTAACAGTGAGGGGCAGACTCTATAGGGGTAACAGTGAGGGACAGTATGTTGGGTGACAGGGAGTGACAGCATGTGTAGAGGTGACAGTGAGGGGCAGCTTATACAGGGGTGACAGAGGGGGCAGCATGTGTAGGGGTGACAGTGAGTGATAGCATGTGTAGGAGTGACAGCGAATGACAGCATGTATGGGGTGACGGTGAGGGACAGCATATGTAGGAGTGACCATGAATGACAGCATGTGTAGGGGTGACAGT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2880:HG4_PB_pbsv_5861:HG4_10X_allpass_1117:HG2_Ill_MetaSV_3985:HG4_Ill_GATKHCSBGrefine_4124:HG2_PB_SVrefine2Falcon1plusDovetail_9545:HG2_PB_assemblyticsfalcon_21392:HG2_PB_pbsv_5827:HG2_Ill_tnscope_654:HG4_Ill_SVrefine2DISCOVARDovetail_4281:HG2_PB_SVrefine2PB10Xhap12_4204;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_2880:HG4_Ill_SVrefine2DISCOVARDovetail_4281:HG2_PB_SVrefine2PB10Xhap12_4204;NumExactMatchSVs=3;ClusterMaxShiftDist=0.183765;ClusterMaxSizeDiff=0.183765;ClusterMaxEditDist=0.224799;PBcalls=6;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-611;DistBack=-1;DistForward=-328;DistMin=-328;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=28;REFWIDENED=5:57777240-57777878;PctSeqSimilarity=0.8913;PctSizeSimilarity=0.9885;PctRecOverlap=0.5376;SizeDiff=7;StartDistance=-283;EndDistance=-276;GTMatch=0;TruScore=80;MatchId=3151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:0|1:21:4:1:18:./.:0:0:0:0:0/0:27:0:0/0:90:3:.:.:.
chr5	58277277	HG2_PB_SVrefine2Falcon1plusDovetail_9550	AAAGTTAATACCTCTTATGTTATATAAGGGAATAAGAAAAAGAAAATGAAGAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4215:HG4_PB_HySA_8654:HG2_PB_HySA_10823:HG4_PB_pbsv_5866:HG2_PB_pbsv_5833:HG3_PB_pbsv_5664:HG4_PB_SVrefine2Falcon1Dovetail_3532:HG4_Ill_svaba_7558:HG4_Ill_manta_1440:HG4_Ill_SVrefine2DISCOVARDovetail_4283:HG4_Ill_Krunchall_8549:HG4_Ill_GATKHC_9777:HG4_Ill_GATKHCSBGrefine_4126:HG4_Ill_250bpfermikitraw_8141:HG4_Ill_150bpfermikitraw_7805:HG3_PB_HySA_8957:HG3_Ill_svaba_7523:HG3_Ill_manta_1359:HG3_Ill_Krunchall_8051:HG3_Ill_GATKHCSBGrefine_3899:HG3_Ill_250bpfermikitraw_7777:HG3_Ill_150bpfermikitraw_7600:HG2_PB_SVrefine2PBcRplusDovetail_8903:HG2_PB_SVrefine2PB10Xhap12_4208:HG2_PB_SVrefine2Falcon2Bionano_2883:HG2_PB_SVrefine2Falcon1plusDovetail_9550:HG2_Ill_svaba_7440:HG2_Ill_manta_1656:HG2_Ill_SpiralSDKrefine_13570:HG2_Ill_SVrefine2DISCOVARplusDovetail_10313:HG2_Ill_Krunchall_8243:HG2_Ill_GATKHCSBGrefine_4051:HG2_Ill_250bpfermikitraw_8078:HG2_Ill_150bpfermikitraw_7560;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4215:HG4_PB_SVrefine2Falcon1Dovetail_3532:HG4_Ill_svaba_7558:HG4_Ill_manta_1440:HG4_Ill_SVrefine2DISCOVARDovetail_4283:HG4_Ill_Krunchall_8549:HG4_Ill_GATKHC_9777:HG4_Ill_GATKHCSBGrefine_4126:HG4_Ill_250bpfermikitraw_8141:HG4_Ill_150bpfermikitraw_7805:HG3_PB_HySA_8957:HG3_Ill_svaba_7523:HG3_Ill_manta_1359:HG3_Ill_Krunchall_8051:HG3_Ill_GATKHCSBGrefine_3899:HG3_Ill_250bpfermikitraw_7777:HG3_Ill_150bpfermikitraw_7600:HG2_PB_SVrefine2PBcRplusDovetail_8903:HG2_PB_SVrefine2PB10Xhap12_4208:HG2_PB_SVrefine2Falcon2Bionano_2883:HG2_PB_SVrefine2Falcon1plusDovetail_9550:HG2_Ill_svaba_7440:HG2_Ill_manta_1656:HG2_Ill_SpiralSDKrefine_13570:HG2_Ill_SVrefine2DISCOVARplusDovetail_10313:HG2_Ill_Krunchall_8243:HG2_Ill_GATKHCSBGrefine_4051:HG2_Ill_250bpfermikitraw_8078:HG2_Ill_150bpfermikitraw_7560;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0384615;PBcalls=11;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=44175;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=53;REFWIDENED=5:58277278-58277382;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:67:./.:3:7:0:10:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr5	60001704	HG2_Ill_SpiralSDKrefine_13579	AACTAATAAATAGGTGTTGCTTAAAATCCAGTTAATCTGTAGTAATTTCTTATGTACCAACAGAAAACTGATACACATTTTACATACAAAACTCTGAAATGCTTGTTCTAGTTACTCTATGGCTGGAGTAGGAATGGGAGAAAAAAATCAATATTTAATGAGTAATTATTTACAAGGGATGAGGGAGAAGAAAACGTCAAAGATGGCTCTAAATATATTCTGGAAAGCTGGCAAAAAAAAAAAAATTGTGCCATTAACCATAAGGAAAGAAGAGTTGTCTGGGTAAGCAAGAAGGAACATGGAGAAGGGGTCTCAGACTTTCCTGTGCATAAGAATTGTCAAGGTTCTTATGCATAGTAAAGCGCATAAAACTCAATTTTATGGATTCCACCCACAGAGGTAGCTAGAAGTACCTAGATTCCATAGCTAATTTGCTGTTTGACTATTTGCTAGTAGCTCCAAAGATCCATGACATGTACAGATTTCTAATTTTGATGAATCAAAAACTTGAAATCCCCACCTTGGGGGATGGAGTGTAAGAGAATATCATCCAGCTTGTAATTAAGCCCATCCAGCCACCTGGAATCCTCAGCTCAATATGGCTTTCTACTTTTCTAATAGAGAAAAGTAGAGTTAATCTCTACTTTTCATGCCAATGCATGTTACCGGAAAAAATATTTTGTTATACTGATATTGGATAATTCACACAAGCCATTGGACTTATTCCTTATACATGCCAAAGGCCAAAAGAAGTCGATACTTGGACATGCAGCATTCAAATGAGAATGAAATATCCAAAGAGAAATAACCCATATTTGAAAATACTAGATGAAGAGGTTGGGTACAGTTGGGGAAGTTAGAGGGAGGAAGAATAGAGAGAGGAACAGAGGACCTTACCAATGTCCCATTTCAAGGCTTTTGGTTTATGGCCTTGACTGACCTGTTTCTCTGGCCCTCATACTACTGCCTCACCCCTGTGTCTAGACTTATCTTCCTACACCTGGCTCTTCATGTACCACAATCTCTCAGCCTTCCCTGGGCCCGTGATAAATCTTATGACAGGGGCTTGTCCCATTCTTGGCTCCAACCCTGGAGACTAAAGTTCTGGACATTCATCAAAGACCTTCTCCTCTATTTTACTTTTAAAGGCACAAGATTCAAGTTTCTGCCTCAGCAGAATTACAGATCATTACATATTACTGAACTTTGGGGCAGCTGACAAATAGTCAAACAATATATTGTTTGATATCCAGTATTAGTAGATCAGTTGTCTGGCCCATGGCACCTAAGCTCAGTTTTAAAAGAAATGAAAAAAGTAAGATAAAATTATTGGCATTTTTTAAAGATTCATCACAAATGGTCCCTGAAATAGCAAGTGTACTTAATTTAGCTGGGGGGAAAAAAACTCAATTAAAAGTTTAAAAAGGAAGTTAGGGTAGAAGGGTGGGGAATATATAGAACTTTTGGGAAACACTACTGCCAGATCCTACAGACACTTAGAAGAAGTAAGGTGCTCAAGGCAGAGGGTGCTTCCTTCAGGGCAAGATATTTAACAGGAAATTTCTTACACCTGGAATCAACAGTAGAGCATCCTGTGTGCCTAGGCCCATGGACCACACGCACATGCAAGAACCCAGAATCAGAAGTGGAGAGTAGCCGGGTGCACAATCTCAGTGACTGGAGGATTGCTTGAAGCCATGAGTTTGAGACCAGCCTCAGCAAAATAGCGAGACACTTGTCACTACAAAAAAAAAAATTTTTTTTTAATTAGCCAGACTTGGGGGCACACACCTGTGGTCCCAGTTACTGAGGAGGCTGAGGTGGGAAGACTGTTTAAGTCCAGGAGTTTGAGGCTGAAGTGAGCTATGATCATGCCACTGCACTCCAGCCTGGGCAATAGAGCGAGATTCTGTCTCTAAAAAATAAAAAATAAATTTTAAAAAATGGATAGTGGTCGGCGTC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_5840:HG4_PB_assemblyticsfalcon_20909:HG2_10X_allpass_955:HG4_Ill_Krunchall_8563:HG3_Ill_Krunchall_8058:HG2_Ill_Krunchall_8251:HG3_PB_assemblyticsfalcon_21351:HG2_PB_assemblyticsfalcon_21410:HG2_PB_assemblyticsPBcR_20696:HG4_PB_pbsv_5873:HG4_PB_SVrefine2PBcRDovetail_2915:HG4_PB_SVrefine2Falcon1Dovetail_3536:HG4_Ill_MetaSV_4152:HG4_10X_allpass_1118:HG3_PB_pbsv_5671:HG3_PB_SVrefine2PBcRDovetail_2687:HG3_PB_SVrefine2Falcon1Dovetail_3625:HG3_Ill_MetaSV_4165:HG3_10X_allpass_1176:HG2_PB_SVrefine2PBcRplusDovetail_8908:HG2_PB_SVrefine2PB10Xhap12_4213:HG2_PB_SVrefine2Falcon2Bionano_2888:HG2_PB_SVrefine2Falcon1plusDovetail_9554:HG2_Ill_SpiralSDKrefine_13579:HG2_Ill_SVrefine2DISCOVARplusDovetail_10319:HG2_Ill_MetaSV_3987:HG2_Ill_GATKHCSBGrefine_4056:HG2_10X_SVrefine210Xhap12_4224:HG2_Ill_breakscan11_849:HG2_Ill_tnscope_656;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4224:HG2_Ill_GATKHCSBGrefine_4056:HG2_Ill_MetaSV_3987:HG2_Ill_SVrefine2DISCOVARplusDovetail_10319:HG2_Ill_SpiralSDKrefine_13579:HG2_PB_SVrefine2Falcon1plusDovetail_9554:HG2_PB_SVrefine2Falcon2Bionano_2888:HG2_PB_SVrefine2PB10Xhap12_4213:HG2_PB_SVrefine2PBcRplusDovetail_8908:HG3_10X_allpass_1176:HG3_Ill_MetaSV_4165:HG3_PB_SVrefine2Falcon1Dovetail_3625:HG3_PB_SVrefine2PBcRDovetail_2687:HG3_PB_pbsv_5671:HG4_10X_allpass_1118:HG4_Ill_MetaSV_4152:HG4_PB_SVrefine2Falcon1Dovetail_3536:HG4_PB_SVrefine2PBcRDovetail_2915:HG4_PB_pbsv_5873;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00459535;ClusterMaxSizeDiff=0.00459535;ClusterMaxEditDist=0.00459535;PBcalls=15;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1961;DistBack=6486;DistForward=13948;DistMin=6486;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=5:60001705-60003670;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:66:1/1:3:20:1:16:./.:0:0:0:0:1/1:0:42:1/1:2:131:1890:.:.
chr5	61203704	HG2_PB_SVrefine2Falcon2Bionano_2891	CACAATAGCAAAATCACAAAATCAACCTAAGTGTTCATCAACAGAAGACTGGATAAACAAAATGTAGTGTATGTATATATATATATATATATATATATATATATATATATATATATAAACACATACATACATACACACACACACACACACACATA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_5843:HG2_PB_PB10Xdip_24182:HG2_PB_HySA_10842:HG4_Ill_scalpel_5588:HG4_Ill_GATKHC_9803:HG4_Ill_GATKHCSBGrefine_4135:HG4_10X_allpass_1119:HG2_PB_assemblyticsfalcon_21420:HG2_PB_SVrefine2Falcon2Bionano_2891:HG2_PB_SVrefine2Falcon1plusDovetail_9556:HG2_Ill_SVrefine2DISCOVARplusDovetail_10326:HG2_Ill_GATKHC_9660:HG2_Ill_GATKHCSBGrefine_4059:HG2_10X_SVrefine210Xhap12_4227:HG4_PB_HySA_8674:HG2_PB_SVrefine2PBcRplusDovetail_8911:HG2_PB_SVrefine2PB10Xhap12_4217:HG4_Ill_Krunchall_8573:HG2_PB_assemblyticsPBcR_20704:HG4_PB_pbsv_5876;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4227:HG2_Ill_GATKHCSBGrefine_4059:HG2_Ill_GATKHC_9660:HG2_Ill_SVrefine2DISCOVARplusDovetail_10326:HG2_PB_SVrefine2Falcon1plusDovetail_9556:HG2_PB_SVrefine2Falcon2Bionano_2891:HG2_PB_assemblyticsfalcon_21420:HG4_10X_allpass_1119:HG4_Ill_GATKHCSBGrefine_4135:HG4_Ill_GATKHC_9803:HG4_Ill_scalpel_5588;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0387097;PBcalls=11;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-154;DistBack=52238;DistForward=-87;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:61203705-61203858;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:40:1|0:1:39:39:0:./.:0:0:0:0:0/1:22:17:./.:.:.:.:.:.
chr5	61293626	HG4_Ill_manta_1443	TTAAAAACAATTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAAATAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_3989:HG4_10X_allpass_1120:HG4_PB_assemblyticsfalcon_20919:HG2_PB_assemblyticsfalcon_21421:HG2_10X_allpass_956:HG2_PB_PB10Xdip_24183:HG3_PB_assemblyticsfalcon_21363:HG2_PB_assemblyticsPBcR_20705:HG2_PB_SVrefine2PB10Xhap12_4219:HG4_Ill_Krunchall_8575:HG3_PB_pbsv_5673:HG3_Ill_Krunchall_8067:HG2_Ill_Krunchall_8264:HG2_PB_pbsv_5844:HG4_PB_pbsv_5877:HG3_PB_HySA_8976:HG4_PB_SVrefine2Falcon1Dovetail_3539:HG4_Ill_manta_1443:HG4_Ill_SVrefine2DISCOVARDovetail_4295:HG4_Ill_GATKHCSBGrefine_4138:HG3_PB_SVrefine2PBcRDovetail_2689:HG3_PB_SVrefine2Falcon1Dovetail_3629:HG3_Ill_manta_1361:HG3_Ill_SVrefine2DISCOVARDovetail_4351:HG3_Ill_GATKHCSBGrefine_3908:HG3_10X_allpass_1177:HG2_PB_SVrefine2PBcRplusDovetail_8912:HG2_PB_SVrefine2PB10Xhap12_4218:HG2_PB_SVrefine2Falcon1plusDovetail_9557:HG2_PB_HySA_10843:HG2_Ill_manta_1660:HG2_Ill_GATKHCSBGrefine_4062:HG2_10X_SVrefine210Xhap12_4228:HG4_Ill_MetaSV_4154:HG3_Ill_MetaSV_4166:HG2_Ill_tnscope_657:HG2_Ill_Spiral_428;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4228:HG2_Ill_GATKHCSBGrefine_4062:HG2_Ill_manta_1660:HG2_PB_HySA_10843:HG2_PB_SVrefine2Falcon1plusDovetail_9557:HG2_PB_SVrefine2PB10Xhap12_4218:HG2_PB_SVrefine2PBcRplusDovetail_8912:HG3_10X_allpass_1177:HG3_Ill_GATKHCSBGrefine_3908:HG3_Ill_SVrefine2DISCOVARDovetail_4351:HG3_Ill_manta_1361:HG3_PB_SVrefine2Falcon1Dovetail_3629:HG3_PB_SVrefine2PBcRDovetail_2689:HG4_Ill_GATKHCSBGrefine_4138:HG4_Ill_SVrefine2DISCOVARDovetail_4295:HG4_Ill_manta_1443:HG4_PB_SVrefine2Falcon1Dovetail_3539;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0842434;ClusterMaxSizeDiff=0.0842434;ClusterMaxEditDist=0.0842434;PBcalls=17;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=55210;DistForward=68932;DistMin=55210;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:61293627-61293966;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:58:0|1:25:0:2:55:./.:0:0:0:0:0/1:55:15:0/1:32:7:.:.:.
chr5	61574782	HG3_PB_SVrefine2Falcon1Dovetail_3630	GCCAATAGCCTCCAAAATCTGAAAGAGACAAGTAAGGATTCTCTGAGACACACACAGAGAGAGAGAGAGATACTGATTGATTGATTGATTGATTGATTGATTGATTTTAAGGAACTGGCTCATGTAATTGTGGGAGCTGGCAAATCTTAAATCTGCAGGATAGGCCAGCAGGCTGGAGACCCAGGGAGAAGTCAGTGTTGCAGTCTTAAGTCCAAAGCAGTCTGGAGGCAGAATTTCTTCTACCTGGCTGGGTACAGTGGGTCACGCCTGTAATCCCAGCCCTTTGGGGGCACCGAGGCGGGCGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGAGCAACATGGAGAAATCCCGTCTCTACTAAAAATACAAGAATTACCTGGGTGTGGTGGTGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCACAAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGCGAGCTGAGATCGTGGCATTGCACTCCAGTCTGGGCAATAAGAGTGAAACTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAATTTCTTCTATCTGAGTGGAATTCAGTCTTTTCTCTTAAGGCCTTCAACTGATTAGATGATGCTCATGCATATTATGGAAGGTAATATGCTTTACTCAAAGTCTACAGATTTAAATGTTAATCATATCTAAATAATACACACCTTCACAGTAACATCTAAACTGGTATTTGATCAAATAACTACATACTGTAGCCTAGCCAGATTGGCACATAAAATTAACCATCACACTGTCTTGTCTATTCATGATAGGACTCCTATCAACAGAAAGAGAGTGCAAAGAGTAGACTCCAGCTCTTCAGAGAAGGAAGCAGAATTAAGGACACAGAGAAACCAAGCCTGGGAATTGTCAAAGATTATGGAGAGAAATGGGGACTGCTCAGGATTGAGCCCTGGAAATATCTACAATATTTAAAGTGGGGTCAGGGCTTAGAGAAAAGGGTTTTTCATAAGCTTCAACCTCAAATGTAGTTGCAACCTACTGATCTCTCTATATTTGACATTAAGATGCAGGTGGCTGTCCAGTGGGATTGCCAACAGCTGGAACCATAATTTCAACCAGCTGAGTGACAGATAGCCGATGTATATCCAGCAGCACAACTTCTGAGCCGTGACATCAATAAGCACAGGGAGACAGGATCAATAAAAATTCCAAAACCAAGATGACTGGAGTGAATTCCAAATAAAAAGGTGATATCTAAGGAATTAAAACCACGCAGAGGGAAAGGCAAAATCAGAGTTGTATCTTTAAGATTTTGTTGACTTGGAGGTGAGGTGGGTAGTGAATAAACATGCCTTGACTTGTCTAAAGTATTATTTGTTCTTCTGGACAGGGTGAGAATTGGGACCTTTTGCAAGTTTCTTGCAGGAAATAAAAAGCATACAGCAAAAGTCTACAACTTTCATGATAGACTTTGTGGACAAGTAGAGTTGCTTTAGTACCCAGGTAAGAAAGGACACAGGCCCAGGTCTCAGGAGCAGATGTTGGTGATAACAGATCAGCCTTAGCAACAGACAGTGTCACCAATAGAAATTTCAGATATTTTCATATCACATTGTAGTGTTGCAGAATCTTAAAATATTTTATTGCT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_5845:HG3_10X_allpass_1178:HG4_PB_assemblyticsfalcon_20920:HG3_PB_pbsv_5674:HG3_PB_SVrefine2PBcRDovetail_2690:HG3_PB_SVrefine2Falcon1Dovetail_3630:HG3_Ill_SVrefine2DISCOVARDovetail_4352:HG2_PB_assemblyticsfalcon_21424:HG2_PB_SVrefine2Falcon2Bionano_2892:HG2_10X_SVrefine210Xhap12_4229:HG2_Ill_MetaSV_3990:HG2_10X_allpass_957:HG3_PB_assemblyticsfalcon_21365:HG3_PB_HySA_8979:HG2_PB_HySA_10844:HG3_Ill_MetaSV_4167:HG3_Ill_Krunchall_8069:HG2_PB_SVrefine2PB10Xhap12_4220;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4229:HG2_PB_SVrefine2Falcon2Bionano_2892:HG2_PB_assemblyticsfalcon_21424:HG3_Ill_SVrefine2DISCOVARDovetail_4352:HG3_PB_SVrefine2Falcon1Dovetail_3630:HG3_PB_SVrefine2PBcRDovetail_2690:HG3_PB_pbsv_5674:HG4_PB_assemblyticsfalcon_20920;NumExactMatchSVs=8;ClusterMaxShiftDist=0.190181;ClusterMaxSizeDiff=0.190181;ClusterMaxEditDist=0.190181;PBcalls=11;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-1642;DistBack=-527;DistForward=-1089;DistMin=-1089;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:61574783-61576424;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:63:31:0|1:46:2:1:21:./.:0:0:0:0:0/1:56:12:0/1:164:62:1659:.:.
chr5	62304703	HG2_PB_SVrefine2PBcRplusDovetail_8916	GGGACCAATCAGCTCTCTGTAAAATCGACCAATCAGCTCTCTATAAAATGGACCAATCAGCAGGATGTGGGTGGGGCCAGATAAGGCAATAAAAGCAGGTCACCAGAGCTAGCAGTGGCA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_5680:HG3_PB_HySA_8986:HG2_PB_HySA_10856:HG3_PB_SVrefine2PBcRDovetail_2695:HG3_Ill_svaba_7553:HG3_Ill_scalpel_5776:HG3_Ill_SVrefine2DISCOVARDovetail_4358:HG3_Ill_GATKHC_9639:HG3_Ill_GATKHCSBGrefine_3914:HG3_10X_allpass_1179:HG2_PB_assemblyticsPBcR_20717:HG2_PB_SVrefine2PBcRplusDovetail_8916:HG2_PB_SVrefine2PB10Xhap12_4225:HG2_PB_SVrefine2Falcon1plusDovetail_9561:HG2_Ill_svaba_7471:HG2_Ill_scalpel_5694:HG2_Ill_breakscan11_850:HG2_Ill_SVrefine2DISCOVARplusDovetail_10331:HG2_Ill_GATKHC_9679:HG2_Ill_GATKHCSBGrefine_4068:HG2_10X_SVrefine210Xhap12_4233:HG2_PB_assemblyticsfalcon_21432:HG2_Ill_Krunchall_8272:HG2_PB_pbsv_5851;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4233:HG2_Ill_GATKHCSBGrefine_4068:HG2_Ill_GATKHC_9679:HG2_Ill_SVrefine2DISCOVARplusDovetail_10331:HG2_Ill_breakscan11_850:HG2_Ill_scalpel_5694:HG2_Ill_svaba_7471:HG2_PB_SVrefine2Falcon1plusDovetail_9561:HG2_PB_SVrefine2PB10Xhap12_4225:HG2_PB_SVrefine2PBcRplusDovetail_8916:HG2_PB_assemblyticsPBcR_20717:HG3_10X_allpass_1179:HG3_Ill_GATKHCSBGrefine_3914:HG3_Ill_GATKHC_9639:HG3_Ill_SVrefine2DISCOVARDovetail_4358:HG3_Ill_scalpel_5776:HG3_Ill_svaba_7553:HG3_PB_SVrefine2PBcRDovetail_2695;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0334728;ClusterMaxSizeDiff=0.0251046;ClusterMaxEditDist=0.100418;PBcalls=10;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-119;DistBack=138187;DistForward=1705;DistMin=1705;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:62304704-62304822;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:55:1|0:1:50:20:3:./.:0:0:0:0:0/1:32:27:./.:.:.:.:.:.
chr5	62620685	HG3_Ill_GATKHCSBGrefine_3915	TGAGGACTGGTTATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACTTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_429:HG3_PB_assemblyticsfalcon_21377:HG2_PB_assemblyticsfalcon_21436:HG3_Ill_Krunchall_8077:HG2_Ill_Krunchall_8275:HG3_Ill_Spiral_6349:HG3_Ill_MetaSV_4171:HG2_Ill_tnscope_658:HG2_Ill_MetaSV_3992:HG4_Ill_svaba_7584:HG3_PB_pbsv_5683:HG3_PB_SVrefine2Falcon1Dovetail_3636:HG3_Ill_svaba_7555:HG3_Ill_manta_1362:HG3_Ill_GATKHCSBGrefine_3915:HG3_10X_allpass_1180:HG2_PB_pbsv_5853:HG2_PB_SVrefine2Falcon2Bionano_2896:HG2_Ill_svaba_7474:HG2_Ill_scalpel_5696:HG2_Ill_manta_1662:HG2_Ill_breakscan11_851:HG2_Ill_SpiralSDKrefine_13593:HG2_Ill_GATKHCSBGrefine_4069:HG2_10X_allpass_958:HG2_10X_SVrefine210Xhap12_4237;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4237:HG2_10X_allpass_958:HG2_Ill_GATKHCSBGrefine_4069:HG2_Ill_SpiralSDKrefine_13593:HG2_Ill_breakscan11_851:HG2_Ill_manta_1662:HG2_Ill_scalpel_5696:HG2_Ill_svaba_7474:HG2_PB_SVrefine2Falcon2Bionano_2896:HG2_PB_pbsv_5853:HG3_10X_allpass_1180:HG3_Ill_GATKHCSBGrefine_3915:HG3_Ill_manta_1362:HG3_Ill_svaba_7555:HG3_PB_SVrefine2Falcon1Dovetail_3636:HG3_PB_pbsv_5683:HG4_Ill_svaba_7584;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00619195;ClusterMaxSizeDiff=0.00619195;ClusterMaxEditDist=0.00620155;PBcalls=6;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=14402;DistForward=-293;DistMin=-293;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2401;REFWIDENED=5:62618304-62629775;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:35:1|0:8:30:29:1:./.:0:0:0:0:0/1:28:16:0/1:22:5:.:.:.
chr5	62704438	HG3_Ill_manta_1364	TGAAATATAAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATGCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_430:HG3_PB_assemblyticsfalcon_21378:HG4_PB_assemblyticsfalcon_20929:HG4_Ill_Krunchall_8580:HG3_Ill_Krunchall_8079:HG2_Ill_Krunchall_8276:HG4_PB_pbsv_5884:HG3_PB_pbsv_5685:HG3_PB_HySA_8989:HG4_Ill_MetaSV_4157:HG3_Ill_MetaSV_4172:HG2_Ill_tnscope_659:HG2_Ill_MetaSV_3993:HG4_PB_SVrefine2Falcon1Dovetail_3543:HG4_Ill_scalpel_5592:HG4_Ill_manta_1446:HG4_Ill_SVrefine2DISCOVARDovetail_4298:HG4_Ill_GATKHCSBGrefine_4147:HG4_10X_allpass_1121:HG3_PB_SVrefine2PBcRDovetail_2699:HG3_PB_SVrefine2Falcon1Dovetail_3637:HG3_Ill_manta_1364:HG3_Ill_SVrefine2DISCOVARDovetail_4361:HG3_Ill_GATKHCSBGrefine_3917:HG3_10X_allpass_1181:HG2_PB_pbsv_5854:HG2_PB_SVrefine2Falcon1plusDovetail_9563:HG2_Ill_scalpel_5697:HG2_Ill_manta_1663:HG2_Ill_breakscan11_852:HG2_Ill_SVrefine2DISCOVARplusDovetail_10332:HG2_Ill_GATKHCSBGrefine_4070:HG2_10X_allpass_959:HG2_10X_SVrefine210Xhap12_4238;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4238:HG2_10X_allpass_959:HG2_Ill_GATKHCSBGrefine_4070:HG2_Ill_SVrefine2DISCOVARplusDovetail_10332:HG2_Ill_breakscan11_852:HG2_Ill_manta_1663:HG2_Ill_scalpel_5697:HG2_PB_SVrefine2Falcon1plusDovetail_9563:HG2_PB_pbsv_5854:HG3_10X_allpass_1181:HG3_Ill_GATKHCSBGrefine_3917:HG3_Ill_SVrefine2DISCOVARDovetail_4361:HG3_Ill_manta_1364:HG3_PB_SVrefine2Falcon1Dovetail_3637:HG3_PB_SVrefine2PBcRDovetail_2699:HG4_10X_allpass_1121:HG4_Ill_GATKHCSBGrefine_4147:HG4_Ill_SVrefine2DISCOVARDovetail_4298:HG4_Ill_manta_1446:HG4_Ill_scalpel_5592:HG4_PB_SVrefine2Falcon1Dovetail_3543;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0786164;ClusterMaxSizeDiff=0.0786164;ClusterMaxEditDist=0.0786164;PBcalls=10;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=16729;DistForward=11559;DistMin=11559;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:62704439-62704774;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3159.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:22:0|1:40:1:4:17:./.:0:0:0:0:0/1:15:19:0/1:26:4:.:.:.
chr5	63732637	HG4_Ill_Krunchall_8587	AAAAAAAATAAACTGATCAAAGTTGCAGGATATAAAATCAACAAACAAAAATCAGTAGCATTTCTATACACTAAT	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_21442:HG2_PB_pbsv_5855:HG3_PB_pbsv_5686:HG4_PB_pbsv_5886:HG2_PB_HySA_10866:HG2_PB_HySA_10865:HG2_PB_assemblyticsPBcR_20724:HG4_Ill_svaba_7589:HG4_Ill_scalpel_5600:HG4_Ill_manta_1447:HG4_Ill_Krunchall_8587:HG4_Ill_GATKHC_9825:HG4_Ill_GATKHCSBGrefine_4148:HG4_Ill_250bpfermikitraw_8172:HG4_Ill_150bpfermikitraw_7837:HG3_Ill_svaba_7559:HG3_Ill_scalpel_5781:HG3_Ill_manta_1365:HG3_Ill_Krunchall_8083:HG3_Ill_GATKHC_9646:HG3_Ill_GATKHCSBGrefine_3918:HG3_Ill_250bpfermikitraw_7806:HG3_Ill_150bpfermikitraw_7631:HG2_Ill_svaba_7478:HG2_Ill_scalpel_5703:HG2_Ill_manta_1664:HG2_Ill_Krunchall_8280:HG2_Ill_GATKHC_9686:HG2_Ill_GATKHCSBGrefine_4071:HG2_Ill_250bpfermikitraw_8115:HG2_Ill_150bpfermikitraw_7601:HG3_PB_HySA_8994;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7601:HG2_Ill_250bpfermikitraw_8115:HG2_Ill_GATKHCSBGrefine_4071:HG2_Ill_GATKHC_9686:HG2_Ill_Krunchall_8280:HG2_Ill_manta_1664:HG2_Ill_scalpel_5703:HG2_Ill_svaba_7478:HG3_Ill_150bpfermikitraw_7631:HG3_Ill_250bpfermikitraw_7806:HG3_Ill_GATKHCSBGrefine_3918:HG3_Ill_GATKHC_9646:HG3_Ill_Krunchall_8083:HG3_Ill_manta_1365:HG3_Ill_scalpel_5781:HG3_Ill_svaba_7559:HG4_Ill_150bpfermikitraw_7837:HG4_Ill_250bpfermikitraw_8172:HG4_Ill_GATKHCSBGrefine_4148:HG4_Ill_GATKHC_9825:HG4_Ill_Krunchall_8587:HG4_Ill_manta_1447:HG4_Ill_scalpel_5600:HG4_Ill_svaba_7589;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0544218;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-74;DistBack=1616;DistForward=5;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=78;REFWIDENED=5:63732638-63732789;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:1:14:1:20:./.:0:0:0:0:1/1:0:54:./.:.:.:.:.:.
chr5	64286054	HG2_PB_SVrefine2PB10Xhap12_4229	AGAGTTTTTATTTGTTTTTTTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTATCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4244:HG3_PB_assemblyticsfalcon_21384:HG2_PB_assemblyticsfalcon_21446:HG4_PB_assemblyticsfalcon_20941:HG2_PB_pbsv_5859:HG2_Ill_breakscan11_853:HG2_PB_HySA_10870:HG4_Ill_MetaSV_4158:HG2_Ill_tnscope_660:HG4_PB_pbsv_5888:HG4_Ill_scalpel_5604:HG4_Ill_manta_1449:HG4_Ill_SVrefine2DISCOVARDovetail_4306:HG4_Ill_GATKHCSBGrefine_4151:HG4_10X_allpass_1122:HG3_PB_SVrefine2Falcon1Dovetail_3638:HG2_PB_SVrefine2PBcRplusDovetail_8918:HG2_PB_SVrefine2PB10Xhap12_4229:HG2_PB_SVrefine2Falcon2Bionano_2897:HG2_PB_SVrefine2Falcon1plusDovetail_9565:HG2_Ill_manta_1665:HG2_Ill_SpiralSDKrefine_13599:HG2_Ill_MetaSV_3994:HG2_Ill_GATKHCSBGrefine_4074:HG2_10X_allpass_960;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4244:HG4_PB_pbsv_5888:HG4_Ill_scalpel_5604:HG4_Ill_manta_1449:HG4_Ill_SVrefine2DISCOVARDovetail_4306:HG4_Ill_GATKHCSBGrefine_4151:HG4_10X_allpass_1122:HG3_PB_SVrefine2Falcon1Dovetail_3638:HG2_PB_SVrefine2PBcRplusDovetail_8918:HG2_PB_SVrefine2PB10Xhap12_4229:HG2_PB_SVrefine2Falcon2Bionano_2897:HG2_PB_SVrefine2Falcon1plusDovetail_9565:HG2_Ill_manta_1665:HG2_Ill_SpiralSDKrefine_13599:HG2_Ill_MetaSV_3994:HG2_Ill_GATKHCSBGrefine_4074:HG2_10X_allpass_960;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0937973;ClusterMaxSizeDiff=0.0937973;ClusterMaxEditDist=0.0937973;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=49402;DistForward=63854;DistMin=49402;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:64286055-64286407;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:51:0|1:19:1:1:46:./.:0:0:0:0:0/1:33:24:0/1:24:5:.:.:.
chr5	65346041	HG3_10X_allpass_1183	ACTAAATCGAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG4_PB_HySA_8695:HG2_10X_allpass_961:HG3_PB_assemblyticsfalcon_21390:HG2_PB_assemblyticsfalcon_21453:HG4_Ill_Krunchall_8600:HG2_Ill_Krunchall_8291:HG4_PB_assemblyticsfalcon_20948:HG2_PB_assemblyticsPBcR_20733:HG4_Ill_Spiral_481:HG2_Ill_Spiral_431:HG2_Ill_breakscan11_854:HG4_PB_pbsv_5894:HG3_PB_pbsv_5692:HG2_PB_pbsv_5864:HG4_Ill_MetaSV_4160:HG3_Ill_MetaSV_4173:HG2_Ill_tnscope_661:HG2_Ill_MetaSV_3995:HG4_PB_SVrefine2Falcon1Dovetail_3547:HG4_Ill_scalpel_5610:HG4_Ill_manta_1451:HG4_Ill_GATKHCSBGrefine_4154:HG4_10X_allpass_1123:HG3_PB_SVrefine2PBcRDovetail_2702:HG3_PB_SVrefine2Falcon1Dovetail_3641:HG3_Ill_scalpel_5796:HG3_Ill_manta_1366:HG3_Ill_GATKHCSBGrefine_3924:HG3_10X_allpass_1183:HG2_PB_SVrefine2PBcRplusDovetail_8920:HG2_PB_SVrefine2PB10Xhap12_4231:HG2_PB_SVrefine2Falcon1plusDovetail_9567:HG2_Ill_scalpel_5713:HG2_Ill_GATKHCSBGrefine_4076:HG2_10X_SVrefine210Xhap12_4248:HG3_Ill_Spiral_6362;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4248:HG2_Ill_GATKHCSBGrefine_4076:HG2_Ill_scalpel_5713:HG2_PB_SVrefine2Falcon1plusDovetail_9567:HG2_PB_SVrefine2PB10Xhap12_4231:HG2_PB_SVrefine2PBcRplusDovetail_8920:HG3_10X_allpass_1183:HG3_Ill_GATKHCSBGrefine_3924:HG3_Ill_manta_1366:HG3_Ill_scalpel_5796:HG3_PB_SVrefine2Falcon1Dovetail_3641:HG3_PB_SVrefine2PBcRDovetail_2702:HG4_10X_allpass_1123:HG4_Ill_GATKHCSBGrefine_4154:HG4_Ill_manta_1451:HG4_Ill_scalpel_5610:HG4_PB_SVrefine2Falcon1Dovetail_3547;NumExactMatchSVs=17;ClusterMaxShiftDist=0.107034;ClusterMaxSizeDiff=0.107034;ClusterMaxEditDist=0.107034;PBcalls=14;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=-922;DistForward=-326;DistMin=-922;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:65346042-65346386;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:35:./.:20:8:7:23:./.:0:0:0:0:0/1:27:27:0/1:27:5:.:.:.
chr5	68724042	HG4_Ill_GATKHCSBGrefine_4168	ATTTAGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGCATTTTTGGAAGCCAAGGTGGGTGGATCACCAGAGGTCAGGAGTTTGAGACCAGCCTGGGCAACATGGCAAAATCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGCAAGCCTGTAATCCCAGCTACTTGGGAGACTGAGGCGGGAGAATGACTTGAACCTGGAAGGTGGAGGTTGCAGTGAGCTGAGATCCAGATTGTTACCACTGCACTCCAGCCTGGGCAATAGTGCGAGACTGTCTCAAAAATAAATAAATTAAGTAATTAAAATAAATTTAAAGCAGATGAAATGTCTACATGGAAATATTCTGATTTCTTCAGGCTCCCTTTCTATATTAAAAGGTAAGTCTTACAATTAGGGATGGGCAAGTAAGAAAAATGATTAGTTCTTCCTTAAAAAAAT	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_8314:HG2_PB_assemblyticsPBcR_20758:HG2_Ill_MetaSV_3998:HG4_Ill_manta_1455:HG4_Ill_GATKHCSBGrefine_4168:HG4_10X_allpass_1124:HG3_PB_pbsv_5707:HG3_PB_assemblyticsfalcon_21414:HG3_PB_SVrefine2Falcon1Dovetail_3650:HG3_Ill_manta_1371:HG3_Ill_GATKHCSBGrefine_3931:HG3_10X_allpass_1185:HG2_Ill_manta_1671:HG2_Ill_GATKHCSBGrefine_4080:HG4_Ill_Spiral_483:HG3_Ill_Spiral_6381:HG4_PB_assemblyticsfalcon_20968:HG2_PB_SVrefine2PBcRplusDovetail_8930:HG3_PB_SVrefine2PBcRDovetail_2710:HG3_Ill_SVrefine2DISCOVARDovetail_4387:HG2_PB_SVrefine2PB10Xhap12_4244:HG2_PB_SVrefine2Falcon1plusDovetail_9576:HG4_PB_SVrefine2Falcon1Dovetail_3556:HG2_Ill_tnscope_662:HG4_PB_pbsv_5906:HG2_PB_pbsv_5878:HG2_Ill_MetaSV_3997;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4080:HG2_Ill_manta_1671:HG3_10X_allpass_1185:HG3_Ill_GATKHCSBGrefine_3931:HG3_Ill_manta_1371:HG3_PB_SVrefine2Falcon1Dovetail_3650:HG3_PB_assemblyticsfalcon_21414:HG3_PB_pbsv_5707:HG4_10X_allpass_1124:HG4_Ill_GATKHCSBGrefine_4168:HG4_Ill_manta_1455;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0676118;ClusterMaxSizeDiff=0.0676118;ClusterMaxEditDist=0.0676118;PBcalls=12;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-452;DistBack=-410;DistForward=-448;DistMin=-448;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=5:68724035-68724498;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:0|1:21:1:2:24:./.:0:0:0:0:0/1:58:19:0/1:41:12:.:.:.
chr5	70853481	HG3_Ill_250bpfermikitraw_7853	GTAGAGACAGAGTTTGTATTTTTTGTAGAGACCATGTTGTCCAGCCTGGTCTTGAATGTATTTTTGTA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_5885:HG2_PB_PB10Xdip_24276:HG4_Ill_svaba_7629:HG4_Ill_Krunchall_8634:HG4_Ill_GATKHC_9890:HG4_Ill_GATKHCSBGrefine_4169:HG4_Ill_250bpfermikitraw_8222:HG4_CG_vcfBeta_3843:HG4_10X_allpass_1125:HG3_PB_pbsv_5714:HG3_Ill_svaba_7597:HG3_Ill_manta_1372:HG3_Ill_Krunchall_8125:HG3_Ill_GATKHC_9701:HG3_Ill_GATKHCSBGrefine_3932:HG3_Ill_250bpfermikitraw_7853:HG3_CG_vcfBeta_3266:HG2_PB_PB10Xdip_24275:HG2_Ill_svaba_7515:HG2_Ill_scalpel_5731:HG2_Ill_manta_1673:HG2_Ill_breakscan11_855:HG2_Ill_Krunchall_8319:HG2_Ill_GATKHC_9744:HG2_Ill_GATKHCSBGrefine_4081:HG2_Ill_250bpfermikitraw_8158:HG2_Ill_150bpfermikitraw_7647:HG2_CG_vcfBeta_3418:HG2_10X_allpass_964:HG2_PB_assemblyticsPBcR_20765:HG4_PB_pbsv_5911;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_964:HG2_CG_vcfBeta_3418:HG2_Ill_150bpfermikitraw_7647:HG2_Ill_250bpfermikitraw_8158:HG2_Ill_GATKHCSBGrefine_4081:HG2_Ill_GATKHC_9744:HG2_Ill_Krunchall_8319:HG2_Ill_breakscan11_855:HG2_Ill_manta_1673:HG2_Ill_scalpel_5731:HG2_Ill_svaba_7515:HG2_PB_PB10Xdip_24275:HG3_CG_vcfBeta_3266:HG3_Ill_250bpfermikitraw_7853:HG3_Ill_GATKHCSBGrefine_3932:HG3_Ill_GATKHC_9701:HG3_Ill_Krunchall_8125:HG3_Ill_manta_1372:HG3_Ill_svaba_7597:HG3_PB_pbsv_5714:HG4_10X_allpass_1125:HG4_CG_vcfBeta_3843:HG4_Ill_250bpfermikitraw_8222:HG4_Ill_GATKHCSBGrefine_4169:HG4_Ill_GATKHC_9890:HG4_Ill_Krunchall_8634:HG4_Ill_svaba_7629;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0148148;ClusterMaxSizeDiff=0.0148148;ClusterMaxEditDist=0.0296296;PBcalls=6;Illcalls=20;TenXcalls=2;CGcalls=3;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=2;CGexactcalls=3;HG2count=15;HG3count=8;HG4count=8;NumTechs=4;NumTechsExact=4;SVLEN=-67;DistBack=-20;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:70853480-70853549;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:28:0|1:23:1:3:26:./.:0:0:0:0:0/1:30:18:./.:.:.:.:.:.
chr5	71046477	HG2_Ill_svaba_7517	CCTCTTCTTCTCCTCCCCCTCCCTCTCCCCCTCCCTCTCCCCCTCCCTCTCCCCCTCCCT	C	20	PASS	ClusterIDs=HG2_Ill_svaba_7517:HG4_Ill_SVrefine2DISCOVARDovetail_4329:HG2_PB_assemblyticsPBcR_20767:HG3_PB_pbsv_5715:HG2_PB_pbsv_5886:HG3_Ill_svaba_7599;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_svaba_7517:HG3_Ill_svaba_7599;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.278689;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-59;DistBack=-48;DistForward=8426;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=99;REFWIDENED=5:71046478-71046635;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:39:0|1:27:5:4:32:./.:0:0:0:0:0/1:4:7:./.:.:.:.:.:.
chr5	73037202	HG3_Ill_manta_1374	GTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATA	G	20	PASS	ClusterIDs=HG2_CG_vcfBeta_3422:HG4_PB_assemblyticsfalcon_20989:HG3_PB_assemblyticsfalcon_21435:HG2_PB_assemblyticsPBcR_20779:HG3_PB_HySA_9060:HG2_PB_HySA_10926:HG4_PB_HySA_8742:HG4_Ill_svaba_7640:HG4_Ill_Krunchall_8649:HG4_Ill_GATKHC_9904:HG4_Ill_GATKHCSBGrefine_4173:HG4_Ill_FB_5386:HG4_Ill_250bpfermikitraw_8233:HG4_Ill_150bpfermikitraw_7896:HG3_Ill_svaba_7613:HG3_Ill_manta_1374:HG3_Ill_GATKHC_9720:HG3_Ill_GATKHCSBGrefine_3936:HG3_Ill_250bpfermikitraw_7867:HG3_Ill_150bpfermikitraw_7694:HG2_Ill_svaba_7530:HG2_Ill_manta_1674:HG2_Ill_SpiralSDKrefine_13634:HG2_Ill_Krunchall_8336:HG2_Ill_GATKHC_9764:HG2_Ill_GATKHCSBGrefine_4084:HG2_Ill_250bpfermikitraw_8172:HG2_Ill_150bpfermikitraw_7664:HG2_PB_assemblyticsfalcon_21490:HG3_Ill_svaba_7612:HG3_Ill_Krunchall_8142:HG3_Ill_GATKHC_9719:HG3_Ill_GATKHCSBGrefine_3935:HG3_Ill_250bpfermikitraw_7866:HG3_Ill_150bpfermikitraw_7693:HG3_10X_allpass_1187;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7664:HG2_Ill_250bpfermikitraw_8172:HG2_Ill_GATKHCSBGrefine_4084:HG2_Ill_GATKHC_9764:HG2_Ill_Krunchall_8336:HG2_Ill_SpiralSDKrefine_13634:HG2_Ill_manta_1674:HG2_Ill_svaba_7530:HG3_Ill_150bpfermikitraw_7694:HG3_Ill_250bpfermikitraw_7867:HG3_Ill_GATKHCSBGrefine_3936:HG3_Ill_GATKHC_9720:HG3_Ill_manta_1374:HG3_Ill_svaba_7613:HG4_Ill_150bpfermikitraw_7896:HG4_Ill_250bpfermikitraw_8233:HG4_Ill_FB_5386:HG4_Ill_GATKHCSBGrefine_4173:HG4_Ill_GATKHC_9904:HG4_Ill_Krunchall_8649:HG4_Ill_svaba_7640;NumExactMatchSVs=21;ClusterMaxShiftDist=0.226415;ClusterMaxSizeDiff=0.226415;ClusterMaxEditDist=0.283019;PBcalls=7;Illcalls=27;TenXcalls=1;CGcalls=1;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=15;HG4count=9;NumTechs=4;NumTechsExact=1;SVLEN=-52;DistBack=3902;DistForward=-53;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:73037201-73037256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:77:1/1:3:34:0:31:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr5	73071706	HG2_Ill_svaba_7531	GTCTTGAATATACATGACTCTCCAAAAAACACATAATTTGAATCAACACAA	G	20	PASS	ClusterIDs=HG4_Ill_Krunchall_8650:HG4_Ill_GATKHC_9906:HG4_PB_HySA_8743:HG4_Ill_GATKHCSBGrefine_4175:HG3_Ill_GATKHC_9721:HG3_Ill_GATKHCSBGrefine_3937:HG2_Ill_GATKHC_9765:HG2_Ill_GATKHCSBGrefine_4085:HG2_Ill_breakscan11_856:HG2_Ill_SpiralSDKrefine_13635:HG4_Ill_manta_1457:HG4_CG_vcfBeta_3851:HG3_Ill_manta_1375:HG3_CG_vcfBeta_3274:HG2_Ill_manta_1675:HG2_CG_vcfBeta_3423:HG4_Ill_Spiral_484:HG2_Ill_Spiral_432:HG4_Ill_svaba_7641:HG4_Ill_Krunchall_8651:HG4_Ill_250bpfermikitraw_8234:HG4_Ill_150bpfermikitraw_7898:HG3_Ill_svaba_7614:HG3_Ill_Krunchall_8143:HG3_Ill_250bpfermikitraw_7868:HG3_Ill_150bpfermikitraw_7695:HG3_10X_allpass_1188:HG2_Ill_svaba_7531:HG2_Ill_scalpel_5745:HG2_Ill_Krunchall_8337:HG2_Ill_250bpfermikitraw_8173:HG2_Ill_150bpfermikitraw_7665:HG2_10X_allpass_965:HG2_PB_assemblyticsfalcon_21491;NumClusterSVs=34;ExactMatchIDs=HG2_10X_allpass_965:HG2_Ill_150bpfermikitraw_7665:HG2_Ill_250bpfermikitraw_8173:HG2_Ill_Krunchall_8337:HG2_Ill_scalpel_5745:HG2_Ill_svaba_7531:HG3_10X_allpass_1188:HG3_Ill_150bpfermikitraw_7695:HG3_Ill_250bpfermikitraw_7868:HG3_Ill_Krunchall_8143:HG3_Ill_svaba_7614:HG4_Ill_150bpfermikitraw_7898:HG4_Ill_250bpfermikitraw_8234:HG4_Ill_Krunchall_8651:HG4_Ill_svaba_7641;NumExactMatchSVs=15;ClusterMaxShiftDist=0.234043;ClusterMaxSizeDiff=0.212766;ClusterMaxEditDist=0.304348;PBcalls=2;Illcalls=27;TenXcalls=2;CGcalls=3;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=11;NumTechs=4;NumTechsExact=2;SVLEN=-50;DistBack=34471;DistForward=18515;DistMin=18515;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:73071705-73071757;PctSeqSimilarity=0.9901;PctSizeSimilarity=0.98;PctRecOverlap=0.9804;SizeDiff=1;StartDistance=0;EndDistance=1;GTMatch=0;TruScore=98;MatchId=3167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:22:./.:19:9:22:11:./.:0:0:0:0:0/1:41:15:./.:.:.:.:.:.
chr5	73648985	HG4_Ill_scalpel_5648	TTTATTCTGTTTTTTTTTTTTTGTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4004:HG4_Ill_Krunchall_8658:HG3_Ill_Krunchall_8151:HG2_Ill_Krunchall_8345:HG4_PB_assemblyticsfalcon_20994:HG3_PB_assemblyticsfalcon_21442:HG2_PB_assemblyticsfalcon_21496:HG2_PB_assemblyticsPBcR_20784:HG4_Ill_Spiral_485:HG3_Ill_Spiral_6405:HG2_Ill_Spiral_433:HG4_PB_pbsv_5915:HG2_PB_HySA_10934:HG4_PB_SVrefine2PBcRDovetail_2925:HG4_PB_SVrefine2Falcon1Dovetail_3564:HG4_Ill_svaba_7649:HG4_Ill_scalpel_5648:HG4_Ill_manta_1458:HG4_Ill_SVrefine2DISCOVARDovetail_4341:HG4_Ill_GATKHCSBGrefine_4179:HG4_10X_allpass_1127:HG3_PB_pbsv_5721:HG3_PB_SVrefine2PBcRDovetail_2722:HG3_PB_SVrefine2Falcon1Dovetail_3659:HG3_Ill_svaba_7624:HG3_Ill_scalpel_5833:HG3_Ill_manta_1377:HG3_Ill_SVrefine2DISCOVARDovetail_4397:HG3_Ill_GATKHCSBGrefine_3941:HG3_10X_allpass_1190:HG2_PB_pbsv_5890:HG2_PB_SVrefine2PBcRplusDovetail_8938:HG2_PB_SVrefine2PB10Xhap12_4260:HG2_PB_SVrefine2Falcon2Bionano_2912:HG2_PB_SVrefine2Falcon1plusDovetail_9585:HG2_Ill_svaba_7541:HG2_Ill_scalpel_5751:HG2_Ill_manta_1676:HG2_Ill_SpiralSDKrefine_13643:HG2_Ill_SVrefine2DISCOVARplusDovetail_10375:HG2_Ill_GATKHCSBGrefine_4090:HG2_10X_allpass_967:HG2_10X_SVrefine210Xhap12_4275:HG2_Ill_breakscan11_858:HG4_Ill_MetaSV_4169:HG3_Ill_MetaSV_4181:HG2_Ill_tnscope_663;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4275:HG2_10X_allpass_967:HG2_Ill_GATKHCSBGrefine_4090:HG2_Ill_SVrefine2DISCOVARplusDovetail_10375:HG2_Ill_SpiralSDKrefine_13643:HG2_Ill_manta_1676:HG2_Ill_scalpel_5751:HG2_Ill_svaba_7541:HG2_PB_SVrefine2Falcon1plusDovetail_9585:HG2_PB_SVrefine2Falcon2Bionano_2912:HG2_PB_SVrefine2PB10Xhap12_4260:HG2_PB_SVrefine2PBcRplusDovetail_8938:HG2_PB_pbsv_5890:HG3_10X_allpass_1190:HG3_Ill_GATKHCSBGrefine_3941:HG3_Ill_SVrefine2DISCOVARDovetail_4397:HG3_Ill_manta_1377:HG3_Ill_scalpel_5833:HG3_Ill_svaba_7624:HG3_PB_SVrefine2Falcon1Dovetail_3659:HG3_PB_SVrefine2PBcRDovetail_2722:HG3_PB_pbsv_5721:HG4_10X_allpass_1127:HG4_Ill_GATKHCSBGrefine_4179:HG4_Ill_SVrefine2DISCOVARDovetail_4341:HG4_Ill_manta_1458:HG4_Ill_scalpel_5648:HG4_Ill_svaba_7649:HG4_PB_SVrefine2Falcon1Dovetail_3564:HG4_PB_SVrefine2PBcRDovetail_2925;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0670926;ClusterMaxSizeDiff=0.0670926;ClusterMaxEditDist=0.0670926;PBcalls=16;Illcalls=27;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=44887;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=5:73648986-73649314;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:./.:0:1:0:0:./.:0:0:0:0:1/1:0:45:0/1:2:9:.:.:.
chr5	75082293	HG4_Ill_GATKHCSBGrefine_4181	CAAAAATCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTCCTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_859:HG3_PB_assemblyticsfalcon_21448:HG2_PB_assemblyticsfalcon_21505:HG2_PB_assemblyticsPBcR_20791:HG3_Ill_Krunchall_8159:HG4_PB_HySA_8759:HG3_PB_SVrefine2Falcon1Dovetail_3662:HG3_PB_HySA_9072:HG3_Ill_MetaSV_4182:HG2_PB_SVrefine2Falcon1plusDovetail_9588:HG2_PB_HySA_10940:HG2_Ill_tnscope_664:HG2_Ill_MetaSV_4006:HG4_PB_pbsv_5919:HG4_PB_SVrefine2Falcon1Dovetail_3568:HG4_Ill_MetaSV_4170:HG4_Ill_GATKHCSBGrefine_4181:HG4_10X_allpass_1128:HG3_PB_pbsv_5724:HG3_PB_SVrefine2PBcRDovetail_2726:HG3_Ill_manta_1379:HG3_Ill_SVrefine2DISCOVARDovetail_4405:HG3_Ill_GATKHCSBGrefine_3944:HG3_10X_allpass_1192:HG2_PB_pbsv_5892:HG2_PB_SVrefine2PBcRplusDovetail_8942:HG2_Ill_manta_1678:HG2_Ill_GATKHCSBGrefine_4092:HG2_10X_allpass_968:HG2_10X_SVrefine210Xhap12_4282;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4282:HG2_10X_allpass_968:HG2_Ill_GATKHCSBGrefine_4092:HG2_Ill_manta_1678:HG2_PB_SVrefine2PBcRplusDovetail_8942:HG2_PB_pbsv_5892:HG3_10X_allpass_1192:HG3_Ill_GATKHCSBGrefine_3944:HG3_Ill_SVrefine2DISCOVARDovetail_4405:HG3_Ill_manta_1379:HG3_PB_SVrefine2PBcRDovetail_2726:HG3_PB_pbsv_5724:HG4_10X_allpass_1128:HG4_Ill_GATKHCSBGrefine_4181:HG4_Ill_MetaSV_4170:HG4_PB_SVrefine2Falcon1Dovetail_3568:HG4_PB_pbsv_5919;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.0555556;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=6210;DistForward=-300;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=5:75082294-75082611;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:32:0|1:19:2:2:28:./.:0:0:0:0:0/1:30:28:0/1:17:6:.:.:.
chr5	75435663	HG3_Ill_GATKHCSBGrefine_3945	TTAGAAGCTCTTGAAAGTATTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_434:HG3_Ill_Krunchall_8162:HG2_PB_assemblyticsfalcon_21506:HG2_Ill_Krunchall_8352:HG2_PB_pbsv_5893:HG2_Ill_breakscan11_860:HG2_PB_SVrefine2Falcon1plusDovetail_9589:HG3_PB_pbsv_5725:HG3_PB_SVrefine2PBcRDovetail_2727:HG3_Ill_svaba_7632:HG3_Ill_scalpel_5844:HG3_Ill_manta_1380:HG3_Ill_SVrefine2DISCOVARDovetail_4407:HG3_Ill_MetaSV_4183:HG3_Ill_GATKHC_9742:HG3_Ill_GATKHCSBGrefine_3945:HG3_10X_allpass_1193:HG2_PB_SVrefine2PBcRplusDovetail_8943:HG2_PB_SVrefine2Falcon2Bionano_2916:HG2_Ill_svaba_7548:HG2_Ill_manta_1679:HG2_Ill_SpiralSDKrefine_13653:HG2_Ill_SVrefine2DISCOVARplusDovetail_10384:HG2_Ill_MetaSV_4007:HG2_Ill_GATKHC_9786:HG2_Ill_GATKHCSBGrefine_4093:HG2_10X_allpass_969:HG2_10X_SVrefine210Xhap12_4283;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4283:HG2_10X_allpass_969:HG2_Ill_GATKHCSBGrefine_4093:HG2_Ill_GATKHC_9786:HG2_Ill_MetaSV_4007:HG2_Ill_SVrefine2DISCOVARplusDovetail_10384:HG2_Ill_SpiralSDKrefine_13653:HG2_Ill_manta_1679:HG2_Ill_svaba_7548:HG2_PB_SVrefine2Falcon2Bionano_2916:HG2_PB_SVrefine2PBcRplusDovetail_8943:HG3_10X_allpass_1193:HG3_Ill_GATKHCSBGrefine_3945:HG3_Ill_GATKHC_9742:HG3_Ill_MetaSV_4183:HG3_Ill_SVrefine2DISCOVARDovetail_4407:HG3_Ill_manta_1380:HG3_Ill_scalpel_5844:HG3_Ill_svaba_7632:HG3_PB_SVrefine2PBcRDovetail_2727;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0168067;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.0169492;PBcalls=7;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-118;DistBack=54004;DistForward=-97;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=5:75435664-75435802;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:38:0|1:28:1:3:34:./.:0:0:0:0:0/1:23:23:./.:.:.:.:.:.
chr5	77048345	HG2_Ill_MetaSV_4012	GTCCGGCTTATTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTCTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4269:HG3_PB_assemblyticsfalcon_21467:HG4_10X_allpass_1129:HG2_PB_assemblyticsPBcR_20804:HG4_Ill_Krunchall_8677:HG3_PB_pbsv_5734:HG3_Ill_Krunchall_8177:HG2_Ill_Krunchall_8363:HG4_PB_HySA_8770:HG2_PB_HySA_10954:HG4_PB_HySA_8769:HG4_Ill_MetaSV_4174:HG2_Ill_tnscope_665:HG4_PB_pbsv_5934:HG4_PB_SVrefine2PBcRDovetail_2935:HG4_Ill_manta_1463:HG4_Ill_SVrefine2DISCOVARDovetail_4353:HG4_Ill_GATKHCSBGrefine_4187:HG3_PB_SVrefine2Falcon1Dovetail_3670:HG3_PB_HySA_9089:HG3_Ill_manta_1381:HG3_Ill_GATKHCSBGrefine_3949:HG3_10X_allpass_1194:HG2_PB_pbsv_5902:HG2_PB_SVrefine2PBcRplusDovetail_8946:HG2_PB_SVrefine2PB10Xhap12_4270:HG2_Ill_SpiralSDKrefine_13660:HG2_Ill_SVrefine2DISCOVARplusDovetail_10394:HG2_Ill_MetaSV_4012:HG2_Ill_GATKHCSBGrefine_4100:HG2_10X_allpass_970:HG2_10X_SVrefine210Xhap12_4291;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4291:HG2_10X_allpass_970:HG2_Ill_GATKHCSBGrefine_4100:HG2_Ill_MetaSV_4012:HG2_Ill_SVrefine2DISCOVARplusDovetail_10394:HG2_Ill_SpiralSDKrefine_13660:HG2_PB_SVrefine2PB10Xhap12_4270:HG2_PB_SVrefine2PBcRplusDovetail_8946:HG2_PB_pbsv_5902:HG3_10X_allpass_1194:HG3_Ill_GATKHCSBGrefine_3949:HG3_Ill_manta_1381:HG3_PB_HySA_9089:HG3_PB_SVrefine2Falcon1Dovetail_3670:HG4_Ill_GATKHCSBGrefine_4187:HG4_Ill_SVrefine2DISCOVARDovetail_4353:HG4_Ill_manta_1463:HG4_PB_SVrefine2PBcRDovetail_2935:HG4_PB_pbsv_5934;NumExactMatchSVs=19;ClusterMaxShiftDist=0.269341;ClusterMaxSizeDiff=0.269341;ClusterMaxEditDist=0.269341;PBcalls=14;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=22026;DistForward=-337;DistMin=-337;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:77048346-77048695;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:37:0|1:36:0:2:30:./.:0:0:0:0:0/1:47:30:0/1:29:8:.:.:.
chr5	77062308	HG2_Ill_MetaSV_4013	TCTCTCACTTTTATTTATTTATTTATTTATTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_2733:HG2_PB_SVrefine2PBcRplusDovetail_8947:HG2_PB_SVrefine2PB10Xhap12_4271:HG4_PB_assemblyticsfalcon_21018:HG4_PB_SVrefine2Falcon1Dovetail_3573:HG4_Ill_Krunchall_8678:HG3_Ill_Krunchall_8178:HG2_Ill_Krunchall_8364:HG2_PB_assemblyticsfalcon_21525:HG4_PB_pbsv_5935:HG4_Ill_MetaSV_4175:HG3_Ill_MetaSV_4186:HG2_Ill_tnscope_666:HG4_PB_SVrefine2PBcRDovetail_2936:HG4_Ill_svaba_7663:HG4_Ill_scalpel_5666:HG4_Ill_manta_1464:HG4_Ill_SVrefine2DISCOVARDovetail_4354:HG4_Ill_GATKHCSBGrefine_4188:HG4_10X_allpass_1130:HG3_PB_pbsv_5735:HG3_Ill_svaba_7641:HG3_Ill_manta_1382:HG3_Ill_GATKHCSBGrefine_3950:HG3_10X_allpass_1195:HG2_PB_pbsv_5903:HG2_PB_SVrefine2Falcon1plusDovetail_9596:HG2_Ill_svaba_7555:HG2_Ill_manta_1680:HG2_Ill_breakscan11_861:HG2_Ill_SpiralSDKrefine_13661:HG2_Ill_MetaSV_4013:HG2_Ill_GATKHCSBGrefine_4101:HG2_10X_allpass_971:HG2_10X_SVrefine210Xhap12_4292;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4292:HG2_10X_allpass_971:HG2_Ill_GATKHCSBGrefine_4101:HG2_Ill_MetaSV_4013:HG2_Ill_SpiralSDKrefine_13661:HG2_Ill_breakscan11_861:HG2_Ill_manta_1680:HG2_Ill_svaba_7555:HG2_PB_SVrefine2Falcon1plusDovetail_9596:HG2_PB_pbsv_5903:HG3_10X_allpass_1195:HG3_Ill_GATKHCSBGrefine_3950:HG3_Ill_manta_1382:HG3_Ill_svaba_7641:HG3_PB_pbsv_5735:HG4_10X_allpass_1130:HG4_Ill_GATKHCSBGrefine_4188:HG4_Ill_SVrefine2DISCOVARDovetail_4354:HG4_Ill_manta_1464:HG4_Ill_scalpel_5666:HG4_Ill_svaba_7663:HG4_PB_SVrefine2PBcRDovetail_2936;NumExactMatchSVs=22;ClusterMaxShiftDist=0.355786;ClusterMaxSizeDiff=0.355786;ClusterMaxEditDist=0.355786;PBcalls=11;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=13617;DistForward=-269;DistMin=-269;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:77062309-77062635;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:37:0|1:48:1:1:35:./.:0:0:0:0:0/1:50:29:0/1:22:10:.:.:.
chr5	77105218	HG4_Ill_GATKHCSBGrefine_4189	CAAAACTAAACATTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4294:HG2_10X_allpass_972:HG2_PB_pbsv_5905:HG4_PB_pbsv_5937:HG4_PB_assemblyticsfalcon_21019:HG2_PB_assemblyticsfalcon_21527:HG3_PB_assemblyticsfalcon_21469:HG2_PB_assemblyticsPBcR_20807:HG4_Ill_Krunchall_8679:HG3_Ill_Krunchall_8179:HG2_Ill_Krunchall_8365:HG4_PB_SVrefine2Falcon1Dovetail_3574:HG4_Ill_MetaSV_4176:HG3_Ill_MetaSV_4187:HG2_PB_HySA_10955:HG2_Ill_tnscope_667:HG2_Ill_MetaSV_4014:HG4_PB_SVrefine2PBcRDovetail_2937:HG4_Ill_svaba_7664:HG4_Ill_scalpel_5667:HG4_Ill_manta_1465:HG4_Ill_SVrefine2DISCOVARDovetail_4355:HG4_Ill_GATKHCSBGrefine_4189:HG4_10X_allpass_1132:HG3_PB_pbsv_5737:HG3_PB_SVrefine2PBcRDovetail_2735:HG3_PB_SVrefine2Falcon1Dovetail_3672:HG3_Ill_svaba_7642:HG3_Ill_scalpel_5854:HG3_Ill_manta_1383:HG3_Ill_SVrefine2DISCOVARDovetail_4414:HG3_Ill_GATKHCSBGrefine_3951:HG3_10X_allpass_1197:HG2_PB_SVrefine2PBcRplusDovetail_8948:HG2_PB_SVrefine2PB10Xhap12_4272:HG2_PB_SVrefine2Falcon2Bionano_2923:HG2_PB_SVrefine2Falcon1plusDovetail_9597:HG2_Ill_svaba_7556:HG2_Ill_scalpel_5765:HG2_Ill_manta_1681:HG2_Ill_breakscan11_862:HG2_Ill_SVrefine2DISCOVARplusDovetail_10395:HG2_Ill_GATKHCSBGrefine_4103;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4294:HG4_PB_SVrefine2PBcRDovetail_2937:HG4_Ill_svaba_7664:HG4_Ill_scalpel_5667:HG4_Ill_manta_1465:HG4_Ill_SVrefine2DISCOVARDovetail_4355:HG4_Ill_GATKHCSBGrefine_4189:HG4_10X_allpass_1132:HG3_PB_pbsv_5737:HG3_PB_SVrefine2PBcRDovetail_2735:HG3_PB_SVrefine2Falcon1Dovetail_3672:HG3_Ill_svaba_7642:HG3_Ill_scalpel_5854:HG3_Ill_manta_1383:HG3_Ill_SVrefine2DISCOVARDovetail_4414:HG3_Ill_GATKHCSBGrefine_3951:HG3_10X_allpass_1197:HG2_PB_SVrefine2PBcRplusDovetail_8948:HG2_PB_SVrefine2PB10Xhap12_4272:HG2_PB_SVrefine2Falcon2Bionano_2923:HG2_PB_SVrefine2Falcon1plusDovetail_9597:HG2_Ill_svaba_7556:HG2_Ill_scalpel_5765:HG2_Ill_manta_1681:HG2_Ill_breakscan11_862:HG2_Ill_SVrefine2DISCOVARplusDovetail_10395:HG2_Ill_GATKHCSBGrefine_4103;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0830769;ClusterMaxSizeDiff=0.0830769;ClusterMaxEditDist=0.0830769;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=14445;DistForward=304;DistMin=304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:77105219-77105562;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3173.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:2:26:1:30:./.:0:0:0:0:1/1:0:38:./.:2:15:.:.:.
chr5	77574166	HG3_Ill_SVrefine2DISCOVARDovetail_4417	AGGGGACTAATTCTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGG	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_2736:HG3_PB_assemblyticsfalcon_21472:HG2_PB_assemblyticsPBcR_20811:HG4_Ill_Krunchall_8682:HG3_Ill_Krunchall_8182:HG2_Ill_Krunchall_8368:HG4_PB_assemblyticsfalcon_21023:HG4_Ill_Spiral_488:HG3_Ill_Spiral_6421:HG2_PB_HySA_10961:HG2_PB_assemblyticsfalcon_21531:HG3_PB_pbsv_5740:HG3_PB_SVrefine2Falcon1Dovetail_3673:HG4_Ill_MetaSV_4177:HG3_Ill_MetaSV_4188:HG2_Ill_tnscope_668:HG4_PB_SVrefine2PBcRDovetail_2938:HG4_PB_SVrefine2Falcon1Dovetail_3575:HG4_Ill_SVrefine2DISCOVARDovetail_4358:HG4_Ill_GATKHCSBGrefine_4191:HG4_10X_allpass_1133:HG3_Ill_SVrefine2DISCOVARDovetail_4417:HG3_Ill_GATKHCSBGrefine_3952:HG3_10X_allpass_1198:HG2_PB_pbsv_5909:HG2_PB_SVrefine2PBcRplusDovetail_8950:HG2_PB_SVrefine2PB10Xhap12_4274:HG2_PB_SVrefine2Falcon1plusDovetail_9599:HG2_PB_HySA_10960:HG2_Ill_scalpel_5767:HG2_Ill_manta_1682:HG2_Ill_MetaSV_4015:HG2_Ill_GATKHCSBGrefine_4105:HG2_10X_allpass_973:HG2_10X_SVrefine210Xhap12_4295:HG4_PB_pbsv_5940:HG2_Ill_breakscan11_863:HG2_Ill_Spiral_435;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4295:HG2_10X_allpass_973:HG2_Ill_GATKHCSBGrefine_4105:HG2_Ill_MetaSV_4015:HG2_Ill_manta_1682:HG2_Ill_scalpel_5767:HG2_PB_HySA_10960:HG2_PB_SVrefine2Falcon1plusDovetail_9599:HG2_PB_SVrefine2PB10Xhap12_4274:HG2_PB_SVrefine2PBcRplusDovetail_8950:HG2_PB_pbsv_5909:HG3_10X_allpass_1198:HG3_Ill_GATKHCSBGrefine_3952:HG3_Ill_SVrefine2DISCOVARDovetail_4417:HG4_10X_allpass_1133:HG4_Ill_GATKHCSBGrefine_4191:HG4_Ill_SVrefine2DISCOVARDovetail_4358:HG4_PB_SVrefine2Falcon1Dovetail_3575:HG4_PB_SVrefine2PBcRDovetail_2938;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0734266;ClusterMaxSizeDiff=0.0734266;ClusterMaxEditDist=0.0734266;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-290;DistBack=5287;DistForward=-276;DistMin=-276;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=5:77574167-77574467;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:51:0|1:23:0:0:47:./.:0:0:0:0:0/1:22:30:./.:.:.:.:.:.
chr5	79557188	HG3_Ill_SVrefine2DISCOVARDovetail_4427	TAACAAGAGTAGGCTGGGCAGAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATATAAAAAATTAGCCGGGCCTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCGGCCTGGGCGACCTAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_2934:HG2_10X_allpass_976:HG2_PB_SVrefine2PB10Xhap12_4285:HG2_PB_PB10Xdip_24378:HG2_PB_PB10Xdip_24377:HG3_Ill_Krunchall_8215:HG2_Ill_Krunchall_8396:HG3_PB_assemblyticsfalcon_21495:HG4_PB_assemblyticsfalcon_21050:HG2_PB_assemblyticsfalcon_21562:HG2_PB_pbsv_5925:HG3_PB_pbsv_5759:HG3_Ill_MetaSV_4190:HG2_Ill_tnscope_671:HG2_Ill_MetaSV_4019:HG4_PB_SVrefine2Falcon1Dovetail_3586:HG3_PB_SVrefine2PBcRDovetail_2745:HG3_PB_SVrefine2Falcon1Dovetail_3684:HG3_PB_HySA_9115:HG3_Ill_scalpel_5879:HG3_Ill_manta_1388:HG3_Ill_SVrefine2DISCOVARDovetail_4427:HG3_Ill_GATKHCSBGrefine_3964:HG3_10X_allpass_1200:HG2_PB_SVrefine2PB10Xhap12_4284:HG2_PB_SVrefine2Falcon1plusDovetail_9609:HG2_Ill_SVrefine2DISCOVARplusDovetail_10409:HG2_Ill_GATKHCSBGrefine_4119:HG2_10X_SVrefine210Xhap12_4302:HG2_Ill_breakscan11_866:HG3_Ill_Spiral_6456:HG2_Ill_Spiral_438;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4302:HG2_Ill_GATKHCSBGrefine_4119:HG2_Ill_SVrefine2DISCOVARplusDovetail_10409:HG2_PB_PB10Xdip_24377:HG4_PB_SVrefine2Falcon1Dovetail_3586:HG3_PB_SVrefine2PBcRDovetail_2745:HG3_PB_SVrefine2Falcon1Dovetail_3684:HG3_PB_HySA_9115:HG3_Ill_scalpel_5879:HG3_Ill_manta_1388:HG3_Ill_SVrefine2DISCOVARDovetail_4427:HG3_Ill_GATKHCSBGrefine_3964:HG3_10X_allpass_1200:HG2_PB_SVrefine2PB10Xhap12_4284:HG2_PB_SVrefine2Falcon1plusDovetail_9609;NumExactMatchSVs=15;ClusterMaxShiftDist=0.140401;ClusterMaxSizeDiff=0.140401;ClusterMaxEditDist=0.145773;PBcalls=15;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=9468;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=5:79557189-79557513;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3175.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:31:./.:4:15:9:10:./.:0:0:0:0:0/1:33:26:0/1:22:6:.:.:.
chr5	81008164	HG2_Ill_SVrefine2DISCOVARplusDovetail_10415	TAAAAAATAAAGATTACAAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_6471:HG4_PB_assemblyticsfalcon_21064:HG2_PB_assemblyticsPBcR_20844:HG4_Ill_Krunchall_8731:HG3_Ill_Krunchall_8229:HG2_PB_pbsv_5934:HG2_PB_assemblyticsfalcon_21580:HG3_PB_pbsv_5764:HG4_PB_pbsv_5968:HG4_Ill_MetaSV_4188:HG3_Ill_MetaSV_4194:HG2_PB_HySA_11008:HG2_Ill_tnscope_674:HG2_Ill_MetaSV_4022:HG4_PB_SVrefine2PBcRDovetail_2952:HG4_PB_SVrefine2Falcon1Dovetail_3592:HG4_PB_HySA_8814:HG4_Ill_scalpel_5701:HG4_Ill_manta_1474:HG4_Ill_SVrefine2DISCOVARDovetail_4374:HG4_Ill_GATKHCSBGrefine_4212:HG4_10X_allpass_1141:HG3_PB_assemblyticsfalcon_21508:HG3_PB_SVrefine2PBcRDovetail_2749:HG3_PB_SVrefine2Falcon1Dovetail_3688:HG3_PB_HySA_9134:HG3_Ill_scalpel_5895:HG3_Ill_manta_1391:HG3_Ill_SVrefine2DISCOVARDovetail_4430:HG3_Ill_GATKHCSBGrefine_3970:HG3_10X_allpass_1203:HG2_PB_SVrefine2PBcRplusDovetail_8965:HG2_PB_SVrefine2PB10Xhap12_4293:HG2_PB_SVrefine2Falcon2Bionano_2941:HG2_PB_SVrefine2Falcon1plusDovetail_9615:HG2_Ill_scalpel_5804:HG2_Ill_manta_1693:HG2_Ill_SpiralSDKrefine_13695:HG2_Ill_SVrefine2DISCOVARplusDovetail_10415:HG2_Ill_GATKHCSBGrefine_4127:HG2_10X_allpass_979:HG2_10X_SVrefine210Xhap12_4310:HG2_Ill_breakscan11_868:HG4_Ill_Spiral_492;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4310:HG2_10X_allpass_979:HG2_Ill_GATKHCSBGrefine_4127:HG2_Ill_SVrefine2DISCOVARplusDovetail_10415:HG2_Ill_SpiralSDKrefine_13695:HG2_Ill_manta_1693:HG2_Ill_scalpel_5804:HG2_PB_SVrefine2Falcon1plusDovetail_9615:HG2_PB_SVrefine2Falcon2Bionano_2941:HG2_PB_SVrefine2PB10Xhap12_4293:HG2_PB_SVrefine2PBcRplusDovetail_8965:HG3_10X_allpass_1203:HG3_Ill_GATKHCSBGrefine_3970:HG3_Ill_SVrefine2DISCOVARDovetail_4430:HG3_Ill_manta_1391:HG3_Ill_scalpel_5895:HG3_PB_HySA_9134:HG3_PB_SVrefine2Falcon1Dovetail_3688:HG3_PB_SVrefine2PBcRDovetail_2749:HG3_PB_assemblyticsfalcon_21508:HG4_10X_allpass_1141:HG4_Ill_GATKHCSBGrefine_4212:HG4_Ill_SVrefine2DISCOVARDovetail_4374:HG4_Ill_manta_1474:HG4_Ill_scalpel_5701:HG4_PB_HySA_8814:HG4_PB_SVrefine2Falcon1Dovetail_3592:HG4_PB_SVrefine2PBcRDovetail_2952;NumExactMatchSVs=28;ClusterMaxShiftDist=0.12406;ClusterMaxSizeDiff=0.12406;ClusterMaxEditDist=0.12406;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-273;DistBack=25456;DistForward=100930;DistMin=25456;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:81008165-81008454;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:65:1/1:0:17:0:42:./.:0:0:0:0:1/1:0:25:./.:.:.:.:.:.
chr5	81182479	HG2_PB_SVrefine2PB10Xhap12_4294	ACTGCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_PB_HySA_11009:HG4_PB_assemblyticsfalcon_21065:HG2_PB_assemblyticsPBcR_20845:HG4_PB_HySA_8815:HG3_Ill_Spiral_6473:HG2_Ill_Spiral_439:HG2_Ill_breakscan11_869:HG2_PB_SVrefine2PB10Xhap12_4295:HG4_Ill_MetaSV_4189:HG3_Ill_MetaSV_4195:HG2_Ill_tnscope_675:HG2_Ill_MetaSV_4023:HG4_PB_pbsv_5969:HG4_PB_SVrefine2PBcRDovetail_2953:HG4_PB_SVrefine2Falcon1Dovetail_3593:HG4_Ill_manta_1475:HG4_Ill_GATKHCSBGrefine_4213:HG4_10X_allpass_1142:HG3_PB_assemblyticsfalcon_21509:HG3_PB_SVrefine2PBcRDovetail_2750:HG3_PB_SVrefine2Falcon1Dovetail_3689:HG3_Ill_GATKHCSBGrefine_3971:HG3_10X_allpass_1204:HG2_PB_pbsv_5935:HG2_PB_SVrefine2PBcRplusDovetail_8966:HG2_PB_SVrefine2PB10Xhap12_4294:HG2_Ill_scalpel_5805:HG2_Ill_manta_1694:HG2_Ill_SpiralSDKrefine_13696:HG2_Ill_GATKHCSBGrefine_4128:HG2_10X_SVrefine210Xhap12_4311:HG3_PB_pbsv_5765;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4311:HG2_Ill_GATKHCSBGrefine_4128:HG2_Ill_SpiralSDKrefine_13696:HG2_Ill_manta_1694:HG2_Ill_scalpel_5805:HG2_PB_SVrefine2PB10Xhap12_4294:HG2_PB_SVrefine2PBcRplusDovetail_8966:HG2_PB_pbsv_5935:HG3_10X_allpass_1204:HG3_Ill_GATKHCSBGrefine_3971:HG3_PB_SVrefine2Falcon1Dovetail_3689:HG3_PB_SVrefine2PBcRDovetail_2750:HG3_PB_assemblyticsfalcon_21509:HG4_10X_allpass_1142:HG4_Ill_GATKHCSBGrefine_4213:HG4_Ill_manta_1475:HG4_PB_SVrefine2Falcon1Dovetail_3593:HG4_PB_SVrefine2PBcRDovetail_2953:HG4_PB_pbsv_5969;NumExactMatchSVs=19;ClusterMaxShiftDist=0.160689;ClusterMaxSizeDiff=0.160689;ClusterMaxEditDist=0.160689;PBcalls=15;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-342;DistBack=191;DistForward=-335;DistMin=-335;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=5:81182480-81182832;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:49:0|1:34:3:0:42:./.:0:0:0:0:0/1:27:22:0/1:25:11:.:.:.
chr5	82156716	HG3_Ill_SVrefine2DISCOVARDovetail_4433	TAAAGAATTAGAGCTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCGGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_440:HG2_Ill_Krunchall_8426:HG3_Ill_Krunchall_8242:HG3_PB_assemblyticsfalcon_21517:HG3_PB_pbsv_5770:HG2_Ill_tnscope_676:HG2_Ill_MetaSV_4024:HG3_PB_SVrefine2PBcRDovetail_2753:HG3_PB_SVrefine2Falcon1Dovetail_3696:HG3_Ill_manta_1392:HG3_Ill_SVrefine2DISCOVARDovetail_4433:HG3_Ill_GATKHCSBGrefine_3972:HG3_10X_allpass_1208:HG2_PB_pbsv_5941:HG2_PB_SVrefine2PB10Xhap12_4299:HG2_PB_SVrefine2Falcon1plusDovetail_9618:HG2_Ill_manta_1695:HG2_Ill_SVrefine2DISCOVARplusDovetail_10419:HG2_Ill_GATKHCSBGrefine_4131:HG2_10X_allpass_980:HG2_10X_SVrefine210Xhap12_4315:HG2_Ill_breakscan11_870;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4315:HG2_10X_allpass_980:HG2_Ill_GATKHCSBGrefine_4131:HG2_Ill_SVrefine2DISCOVARplusDovetail_10419:HG2_Ill_manta_1695:HG2_PB_SVrefine2Falcon1plusDovetail_9618:HG2_PB_SVrefine2PB10Xhap12_4299:HG2_PB_pbsv_5941:HG3_10X_allpass_1208:HG3_Ill_GATKHCSBGrefine_3972:HG3_Ill_SVrefine2DISCOVARDovetail_4433:HG3_Ill_manta_1392:HG3_PB_SVrefine2Falcon1Dovetail_3696:HG3_PB_SVrefine2PBcRDovetail_2753;NumExactMatchSVs=14;ClusterMaxShiftDist=0.100324;ClusterMaxSizeDiff=0.100324;ClusterMaxEditDist=0.100324;PBcalls=7;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=-353;DistForward=-300;DistMin=-353;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:82156717-82157047;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:49:./.:5:30:23:11:./.:0:0:0:0:0/1:19:21:0/1:20:5:.:.:.
chr5	82906058	HG2_Ill_scalpel_5818	CCCTGACTGGAGGATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4025:HG4_Ill_Krunchall_8752:HG3_Ill_Krunchall_8251:HG2_PB_assemblyticsfalcon_21590:HG3_PB_HySA_9147:HG4_Ill_Krunchall_8751:HG3_Ill_Krunchall_8250:HG2_PB_pbsv_5942:HG4_PB_assemblyticsfalcon_21075:HG3_PB_assemblyticsfalcon_21520:HG2_PB_assemblyticsPBcR_20855:HG3_PB_pbsv_5774:HG2_PB_HySA_11020:HG2_PB_SVrefine2PB10Xhap12_4301:HG2_PB_PB10Xdip_24404:HG2_PB_PB10Xdip_24403:HG2_Ill_breakscan11_871:HG4_PB_pbsv_5976:HG4_PB_SVrefine2PBcRDovetail_2959:HG4_PB_SVrefine2Falcon1Dovetail_3601:HG4_Ill_scalpel_5717:HG4_Ill_manta_1476:HG4_Ill_SVrefine2DISCOVARDovetail_4378:HG4_Ill_MetaSV_4191:HG4_Ill_GATKHCSBGrefine_4218:HG4_10X_allpass_1144:HG3_PB_SVrefine2PBcRDovetail_2756:HG3_PB_SVrefine2Falcon1Dovetail_3698:HG3_Ill_scalpel_5911:HG3_Ill_manta_1393:HG3_Ill_SVrefine2DISCOVARDovetail_4434:HG3_Ill_GATKHCSBGrefine_3976:HG3_10X_allpass_1211:HG2_PB_SVrefine2PBcRplusDovetail_8971:HG2_PB_SVrefine2PB10Xhap12_4300:HG2_PB_SVrefine2Falcon2Bionano_2945:HG2_PB_SVrefine2Falcon1plusDovetail_9620:HG2_Ill_scalpel_5818:HG2_Ill_manta_1696:HG2_Ill_SVrefine2DISCOVARplusDovetail_10422:HG2_Ill_GATKHCSBGrefine_4132:HG2_10X_allpass_981:HG2_10X_SVrefine210Xhap12_4318:HG3_Ill_MetaSV_4202:HG2_Ill_tnscope_677;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4318:HG2_10X_allpass_981:HG2_Ill_GATKHCSBGrefine_4132:HG2_Ill_SVrefine2DISCOVARplusDovetail_10422:HG2_Ill_manta_1696:HG2_Ill_scalpel_5818:HG2_PB_SVrefine2Falcon1plusDovetail_9620:HG2_PB_SVrefine2Falcon2Bionano_2945:HG2_PB_SVrefine2PB10Xhap12_4300:HG2_PB_SVrefine2PBcRplusDovetail_8971:HG3_10X_allpass_1211:HG3_Ill_GATKHCSBGrefine_3976:HG3_Ill_SVrefine2DISCOVARDovetail_4434:HG3_Ill_manta_1393:HG3_Ill_scalpel_5911:HG3_PB_SVrefine2Falcon1Dovetail_3698:HG3_PB_SVrefine2PBcRDovetail_2756:HG4_10X_allpass_1144:HG4_Ill_GATKHCSBGrefine_4218:HG4_Ill_MetaSV_4191:HG4_Ill_SVrefine2DISCOVARDovetail_4378:HG4_Ill_manta_1476:HG4_Ill_scalpel_5717:HG4_PB_SVrefine2Falcon1Dovetail_3601:HG4_PB_SVrefine2PBcRDovetail_2959:HG4_PB_pbsv_5976;NumExactMatchSVs=26;ClusterMaxShiftDist=0.105769;ClusterMaxSizeDiff=0.105769;ClusterMaxEditDist=0.105769;PBcalls=20;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=-815;DistForward=-303;DistMin=-815;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:82906059-82906394;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3179.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:52:0|1:33:0:0:48:./.:0:0:0:0:0/1:27:14:0/1:28:6:.:.:.
chr5	83350687	HG2_Ill_GATKHCSBGrefine_4133	AAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAATAGCCTGCATTGCAAATCAATCCTAAGCCAAAAGAACAAAGCTGGAGACATCACGCTACCTGACTTCAAACTGTACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATACCGACCAATGGAACAGAACAGAGCCCTCAGAAATAATAACACACATCTACAACTATCTGATCTTTGACAAACCTGGCAAAAACAAGAAATGGGGAAAGGATTCCCTGTTTAACAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTCGCACCTTATAAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCGAGAAGAAAACCTAGGCTATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAATAAAAGCCAAAATTGAC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4026:HG2_Ill_Krunchall_8433:HG2_PB_assemblyticsfalcon_21591:HG3_PB_HySA_9149:HG4_PB_assemblyticsfalcon_21076:HG4_PB_SVrefine2Falcon1Dovetail_3602:HG3_PB_pbsv_5775:HG3_PB_SVrefine2PBcRDovetail_2757:HG3_PB_SVrefine2Falcon1Dovetail_3699:HG3_Ill_MetaSV_4203:HG3_Ill_GATKHCSBGrefine_3978:HG3_10X_allpass_1212:HG2_PB_pbsv_5943:HG2_PB_SVrefine2PBcRplusDovetail_8972:HG2_PB_SVrefine2PB10Xhap12_4302:HG2_PB_SVrefine2Falcon1plusDovetail_9621:HG2_Ill_GATKHCSBGrefine_4133:HG2_10X_allpass_982:HG2_10X_SVrefine210Xhap12_4320:HG2_Ill_tnscope_678;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4320:HG2_10X_allpass_982:HG2_Ill_GATKHCSBGrefine_4133:HG2_PB_SVrefine2Falcon1plusDovetail_9621:HG2_PB_SVrefine2PB10Xhap12_4302:HG2_PB_SVrefine2PBcRplusDovetail_8972:HG2_PB_pbsv_5943:HG3_10X_allpass_1212:HG3_Ill_GATKHCSBGrefine_3978:HG3_Ill_MetaSV_4203:HG3_PB_SVrefine2Falcon1Dovetail_3699:HG3_PB_SVrefine2PBcRDovetail_2757:HG3_PB_pbsv_5775:HG4_PB_SVrefine2Falcon1Dovetail_3602;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0188356;ClusterMaxSizeDiff=0.0188356;ClusterMaxEditDist=0.0188356;PBcalls=11;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-585;DistBack=16879;DistForward=-581;DistMin=-581;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=5:83350688-83351278;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:23:0:0:30:./.:0:0:0:0:0/1:56:15:0/1:41:10:.:.:.
chr5	83947917	HG3_Ill_SVrefine2DISCOVARDovetail_4439	TTGCATTGGTAGAGACATGCAGACCTACGAGAGAATTCACAAGATCTATTCCTTTTGTGAAGGCCTTTATCTTAAATCTTCCACTCTTGTTTGGTACTAGGAAAAGTTTAAGTCAGCTAGAATTTCCACCTAATCCTTCCTGTATTATAGTTTTCTTCTATAATTCACTTTACCTTTTAGCAATACATTTTATATTTGAATTCCAGTCCAATGCATCTGTCCTCTGAAACCTGATATGATACAATGGTTTGGTTCTGCTTCATCCAATTTCCTTCAGGGCTCAATGGAAGAAGGGGTGTTGTCCCATTCAGTGGTCCACAACATGAAGAATAGTGGCTATAATTAGTAGTGGGGCAACTTACAACATGGAAGTATCAGGAAGAAGACATGTAAAAGTAGCCAGAAAATTAAGCCTTTTAATTGGCTGGGTAGGTTAGCGGCAATTACGCTTAAAAAAGGTATTTAAGGTGGTTTCTACATTCTTTACCAAAACCTGACTGATTTAGTGCTTGGTACTGGGCATGTTTACTAGCAGCAGTATTAAGTTGCTTCTCGTGGGAAAATAGTATACTGAAAGTCCATGGAATGAGGTGGCTAATGAGTTTTTTAAATTGTGTTAGTGGTCACCTGGAATGAGTGTCTATGAAAGATGAAGCATTGATGGACCAAGTGGCTGTTGCTGTAGATCATTAGCATAGGAACAGCGAATACAATTACTGTGGGATGAGCCAGCAACTTTTGGCTGAATTGGAGAGGTGAAAGAAAGATAATATGTCTTGATCAGGTTTTAAATTCTTGACTCAAGAAATATACAGAAGGCCAGGGAGCTACAGTACTATACTAATATAATCTGTTATCTCTTTAGTCACAAAAGCTGATGTAGCTAGAAATCAGACACAATTTAACTTTCATCCATAGTCCTTTAAGCCTTCTTATTTGAAACAATGCATTGTCAAGGAATGCCTAAAGCCCTAAGAAATAAAATGTATGGAAACCTTGGGTAAATTCAGATGGATATTTATTATAGTCCAATAATTCCAGACCTACTGATTCTCTTGACAGCAGAAGCAACTTCTCCTTCTTCTTTTTTTTTTTTTTTTGTTTGTTTTTTGGTGGAATTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTCGGCTCACTGCAACCTCCGTCTTCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGCCAAGTAGCTGGGATTACAGGCATGCACCACCACACCCAGCTAATTTTGTGTTTTTAGTAGAGACGGGGTGTCCCCATGTTGGTCAGGCTGGTCTCGAACTCCCAACCTCAGGTGATTCGTCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCTAGCCTAAAAGAAGCAACTTCTTACTCCGCATCACTCAGGACTTCATCTTTTGAGGCTGGGACTTCCTTGCTTATGATGATTATACCTGACATAACTTTCTTGTAAGCAAATTCCATTTCCCTTTATGTCCTTTCCCTTCTATTTCTCATTTCTTCCAATTTTTAACTAAAATAAGATCCTAGCATGCTAAAAGAAGCAAAGGCTTAAGAACTGGTAGACTATAATATATTGGCAGAATGCTAGAGAACATGTGTGGGGACAGATTCTAGGAGTGATTCACTGGGGGAAAAGGAACATAATATTTTAATTTAATCTACTCTGTCTATATAGGTAAGATTACCAGAAAATCTCACCCATTTAGATACAGTATAATCAGCACCCAGAAAATCTGAATTCAAGGACTTGGCTAGGGCATCTTGAAGTAGTTGTGACTTTGCTTGGCATATTAGCTGACATTTGGACCTAACTATGGCCTGTAATAAACTAATTTAAGATCCTAAAAGTTCCTAGAATTGGGGTGGTGGTGAAGGAGTCTAAAATTTGAGGAACATAAAAATGGAACTCTCCTCATAGCTCCTAAATATTGGGAAGGTAGAAAAAACACTTATTTAGCCAGTACATTGAAAAATACGCGATGAGGAAACAATCACCATCCTCCAATATCATCCTAATATCTGTCCTCTATAGGTGAAAGGTGAAGACAAACAATGGTACCACTGAAATAAGTACTTTTATTTCAGTGAGCATGATAGATTCTAGAGTGTTAGAAGGCACTCGGCTGCTTAACCACCAGGAGCAATTTGCATGTGATTTCTGCTATAGGTAAGTTAACAAGAAGCAAAATCAGAATGGTTAAATCAATAAAAATAACTGTTGTAGATGAGTGATCTTGCAGTTTCTAGGTAAATGTGGCTGTATCCTCTCGTATTGTTATAGCTAAGGAACAATTAACAAAATTTTTGTCCTCTCTTTCCGTGATTTAAACATTTTCTGGGGCTTACTAAGGGTCTTACTTTAGGGTCTTACTAAGATCCAAAACCCTCAAAGTCACAGTGATTGCAAGGGGAAATCAACAATTATTTTATCAGACATTTGAAACTTCTCATGTTTCTGAAACTGTAGACAAAAGAAATAAAAAGAAAAAGAGAGTAAATTTAGACTGGGGCAATGGTTCTAATTATCAAAGAAAAATAGAATTACTGCTACTCAACTCGGAAAGAGAGGGTCATTCATTTTCCCAAGTGCTTCTCTGGGGAACCTTTCACTTGCCCATAACAGTGCAACATATAATGGAAGACTATTGAAATGTGGTGCTGGTGGGACACCCAAGTGTTTATACCTTTTAAGAATGAAGAAGTAATTCACCTATCATGTAAAGAAATGTGATCAGTTGAGGTGCTGGATACAGGCTAAGGGAACAACAAAGGGGTATAAGATGAAGAAAGTTACGAAGGCCAACTCTAGGCTGTGACCTCAAGCCCATTTTTAAAAATGGTCTTCTTCCATCTTTGCTTTATTCTAATCATGTAAGTTTAACAATTCCCCCACCCCCCATGGCTTTATATACTATGTCTTTATAGTACTTAAAAATAACTTATTCTTTAAGTAATAGAATATAATGGCATTATTGTGCCTGAACAGAAGAGAGATAAACATCACACAGAAATGAGAAGTAAATGATTGTTGGGACTTCATGAAGCCCATTTTGGGAGATATGTTTTCATTTGTTGGTGCATAACTTCCTAATTTAGGTGATAGTGTATTATTATTGCTGTAGTTGGAGTTTGGAATTTAGGTAAATGTAGGACACATATAGGTTTAAGCAACGACAAAAGTAATTTAGTTTGTCCAGTTACCATTTCACCTTTCTTCTAGTGTGTTCTATCATATTGTAGAAACTGGAAGGCTTAAAATTGCATTCATATAACTCCCTCATGGCCAGAGTGTTCTAGGTATGAATTAAAGCCCAACAATTAGCTGCTCTCATGTAATTCTAAATGAAGAAATAAAGTGGAGCCATGTTTTTACTATTGCTATTTTCTGCTTGCAAGCAAAACTGTGACAACATGATATTGTGGCAAAATTCTGGTGTCCATTCTCAGGCTTCTTGTATGCTGAGAGACAGCTGAGGCAGAGCAGTCGTAAGGTTTTATGTTCCAATATCTTTTATCAGCTTATGTGTGTCTAGAAAGAGTAGTGGTGGTAGCACACCACAGACAATAGCTTCTCCAGACTGCAGTTTTATAATCTGAGATTATAGCTAAGCGGTATGGTCTTTAACTCAATAGTTCTATTGTATTCTCAGAGGTAGTAGTTCTCTGGTACAGTAGTTTTGCAGATTTCTTAGTAATTCCTGAGGCTCAGTCTAGGGTCCATTACTTCATCCCTTCCAATGATTTTGTAGGTACCTATTTACCTATATTAAATCTCTCTCTTCCTTACTTACAATGGATAGCTTCTATTTCTCAAATTGAAATTTAATGCAAGGGTGGACTCTATCCAATGGAAATCTCTTATTATTTTGCAGAGCTTCTTAATAGATTTCAATATGCAGAAGTGTGTTTCAAAAAGATTTTGGCAGTAGAAACTAGGAAGGAATTAATTACTCTGCAAAATGAAAAGAAAATAATTTCAAGATCCTGGGTTATTCACACAATAGAAGTGATGGAGAAGAAATTATTTAATGAAATAACATAAACACAGGGAAACAATAAGAAGTGTAATGAACTGAGGAATGGCTGAAGAAACTTACATAAAGAGGTGTAGTAATATCTGCATTGACATGTTTTTAAAAATCTCCATCTTACCTCTCTCTTAGCCTTCCCAATAACTTAAGTGAAGTCTATTCTATTTACAAATTACCTGTGAGTCTGAACTTTTTCAGAAAACTGAGACAAAGCCAAGTTTTATATCTTGGTTGACCAAAACTGAAACAGACAGAAGTTTCAGGGTTGAGATATAATACATAAACCTTTTAAGGCAAGGAAAAGGCATTTAGATTGAGAGGTGATTGTGAGATTACAAGCCCTTAACAATTCAAAGAAATCTTTGACAAGGTTTGATCTTCCACAGGTTGTGGAAAGGTGAATTCAGAGTGATGTATATACATGCTAGAAAGCATCATAAAAATAGGGAAATTTTATCTACTTGATGTTCTTCTGCTTTATTTTCCTTAAATAACTTAATCTTCCTGGAAATCTTGTAAGAAAAATATTAAAAGCAGTTAAGACAAATATTACATCATCTTAGCATTGATAAATTAAACAGAAGAAAAAGATTTAAAAGAAGTTCTTTAAGTATTCACTCTTTAACTCATAAATTTATGCCTAAGTATTTTTTAATACTTCTCTGCTAATACCCAAGGGTATACAGTGGAATAAGATAAAGTGCTAGTGCTCTGAAGCAGTGGTCCCTAACCTTTTTGGCACCAGGGATGGGTCTGGGGGTGGGGAGGGAGGATGGTGTGGGGATGAAACTGTTCCATCTCAGATCATCAGGCATTAGTTAGATTCTCATAAGAAGTGCACAACCTAGATCCCTTGCATGTGGAGTTCATAATAGGGTTTGGGCTCCTATGAGAATCTAATGTGGCCACAGATCTTTCAGGAGGTGGAGCTCAGGTGGTAATGCCCACTGGCCAGCTGCTCATCTCCTGCTGTGTGGGCCAGTTCCTAACAGATCATGGAATGGCCCCCCGGGGGTTGGGGATTGCTGCTCTAAAGGGTCAAATGCTTAGACAGATTTGCTTCTTAAGAAGCAAATACCACACCGATAAAAGAATTAACTATAGGAAAATGAAGTGTGTTAGAAAAAGCCAGACGAGGAGAATTCATAGAGCTCAATGGCAATGGCACTGAAGTGTTTAAAGATTGCAAAGTAGTTAGACTAAGTATAGAAGAGGGAAAAGACTTAGTCAAGCAGAGAGAGTAGTATCTGCAAAGACATATGAATTTTAAAGCTTGTTCTCCATTACAAAAATTGCAAATAGTTTAGCTTGGCTGGAGAACAAAGTCAATGTTGCAGAGTAAAAGGGTGCTACATATGAGTCCAGAGAATTGAAAAGGAAATAAATAATGAAAGAGTTTATATTTTATTCACAAGGCAATAGTAAGCAGTCAAAAAATTTATATGAGTGATGTTATGTTATTGTATGAAAAGTAACTTGAAATGTTTAAGAGGCAAGGAGGGCAGTTCATGATATGTCATAATAATCCAATCGCAATGAATAAGGACATGGAGTTAAATAGTGCCAGTTATGATGAAGACAGCTACTAATTCTAGAGCCATTGAGAAAGAAAAATAAACAGGACCTAACAACGAATATGAGTAGAAAGAAAAGCAAAGAGACAAGGATAAATTCTAGGTTTCTGTCTTGTAGTTAAGAGTTGATATAAGGGTGGTAGTTATAAATACAGAGGTTACTGGAGTTAAAAAAAAAAAGAAGGAATAGTTTTTGGTCCTAATGATTTCTGAAATTATTTGTTACACTGGACTAAAACATAAAGCATAAAGCTTTTGTGTCCCTAGGGCTCAGAAAACATTTCATGGTAAATTAGCATGCAGATAATTACAGCTGCCTCTTCTTTTTAAACACTTAGTCTCAGCAGGCAAGTGTGTTTGCATGTGTAATAAATGCTCCCTCCCAAAATCATTGTCTATGAGGACAAGCCCTGTTTTATTAGAGACAGAAAACACTTACAGTTAAATGAGTTATAGATCTCCCGCTATTCTATGCAGCAAGTAAAACAAACAATAGATATAGGTATTATGTATTAAGATGTAAGAATTATTTAATGTGACAAGATGTGTCTAATATAAACAAGATCTACCCATTCATGTATTCATTCATTCTCAGTGGGCAGAAGTAGCCAAGTATCACAATAAATTATTTTACTGAAGTAAAATAATTAAATAGACCCAATTTTGATGAGAAATTAGCCAATAATTAGAGAAGGCCTTAAATGCTAGTGAAGTGTCAGGTAGAGCAGAGAGGAATCCATCCATATTTCTTTTTTTAAATTTAATTATTTTATATTTTTTGGAGAGATAGGATCTCCCTATTTTGCCAAGGCTAGTGTTGAACTCCTGGTCTCAAGAAATCTTCCTGCATTGGCCTCCCAAGGTGTTGAGATTACAGGCATGAGCCACCATGCCCAGCTCATTCATATTCCTTGTTCTGTAATGGCATGTCCATAGTTTTGTTAATTTGCAACATATTCTTTCTTAAAAAATGGAATTAGATTTTCATGTCCCAGAGGAAAATAATACAATATACGTTGGAGAGGGTGAATTATTTATGAGGTAAAGAAATCAATGACTCATGATCCTTGCAGGTGGAAAAACTGACCTAGAATTGGAGATCCCACTTACCACTTGTTCACAGCCTGGCATCTCTCTTTTATTTATGAGATGAGTAGAGGTGGATATCATTGCTTATACAGCTAAATTCCAGGTATTGGACTGTAACAAAGATTCAGGGGGCTATCCAAGATATTTACCTGTAAATTAGGTAGACATTTTCCAGAAGAAGGTGAATGACTTCTATTGGACAAAGACATTTAGAGAGATAGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4322:HG4_PB_assemblyticsfalcon_21080:HG3_PB_assemblyticsfalcon_21525:HG2_PB_assemblyticsPBcR_20860:HG2_PB_assemblyticsfalcon_21593:HG3_PB_pbsv_5778:HG4_Ill_MetaSV_4193:HG3_Ill_MetaSV_4205:HG2_PB_HySA_11024:HG4_PB_pbsv_5979:HG2_PB_pbsv_5945:HG4_PB_pbsv_5978:HG4_PB_SVrefine2PBcRDovetail_2961:HG4_PB_SVrefine2Falcon1Dovetail_3604:HG4_Ill_SVrefine2DISCOVARDovetail_4381:HG3_PB_pbsv_5777:HG3_PB_SVrefine2PBcRDovetail_2759:HG3_PB_SVrefine2Falcon1Dovetail_3701:HG3_Ill_SVrefine2DISCOVARDovetail_4439:HG2_PB_pbsv_5944:HG2_PB_SVrefine2PBcRplusDovetail_8973:HG2_PB_SVrefine2PB10Xhap12_4304:HG2_PB_SVrefine2Falcon2Bionano_2946:HG2_PB_SVrefine2Falcon1plusDovetail_9622:HG2_Ill_SVrefine2DISCOVARplusDovetail_10426;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4322:HG4_PB_pbsv_5978:HG4_PB_SVrefine2PBcRDovetail_2961:HG4_PB_SVrefine2Falcon1Dovetail_3604:HG4_Ill_SVrefine2DISCOVARDovetail_4381:HG3_PB_pbsv_5777:HG3_PB_SVrefine2PBcRDovetail_2759:HG3_PB_SVrefine2Falcon1Dovetail_3701:HG3_Ill_SVrefine2DISCOVARDovetail_4439:HG2_PB_pbsv_5944:HG2_PB_SVrefine2PBcRplusDovetail_8973:HG2_PB_SVrefine2PB10Xhap12_4304:HG2_PB_SVrefine2Falcon2Bionano_2946:HG2_PB_SVrefine2Falcon1plusDovetail_9622:HG2_Ill_SVrefine2DISCOVARplusDovetail_10426;NumExactMatchSVs=15;ClusterMaxShiftDist=0.13556;ClusterMaxSizeDiff=0.13556;ClusterMaxEditDist=0.13556;PBcalls=19;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=11;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-6962;DistBack=37347;DistForward=40575;DistMin=37347;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=457;REFWIDENED=5:83947918-83955336;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:113:1/1:0:37:0:9:./.:0:0:0:0:./.:0:2:1/1:0:395:7212:.:.
chr5	85405341	HG2_Ill_breakscan11_873	AAGGAGATCATTTTGGAGCTTTAAGATTTGACTGCCCCGTTGGATTGTGGACTTGCATGGAGCCTGCAGCCCCTTTATTTTGGCCAATTTCTCCCATTTGAAATGGCTGTATTTACCCAATGCCTGTACCCCCATTGTATCTAGGAAGTAACTTACGTGCTTTTGATTTT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_5954:HG2_PB_assemblyticsfalcon_21614:HG2_PB_PB10Xdip_24423:HG2_PB_SVrefine2Falcon1plusDovetail_9629:HG3_Ill_MetaSV_4208:HG3_PB_SVrefine2PBcRDovetail_2765:HG3_Ill_svaba_7721:HG3_Ill_scalpel_5926:HG3_Ill_SVrefine2DISCOVARDovetail_4452:HG3_Ill_GATKHCSBGrefine_3991:HG3_Ill_250bpfermikitraw_7993:HG3_Ill_150bpfermikitraw_7816:HG3_10X_allpass_1213:HG2_PB_SVrefine2PBcRplusDovetail_8980:HG2_PB_SVrefine2PB10Xhap12_4313:HG2_PB_SVrefine2Falcon2Bionano_2953:HG2_Ill_svaba_7630:HG2_Ill_scalpel_5829:HG2_Ill_manta_1702:HG2_Ill_breakscan11_873:HG2_Ill_SpiralSDKrefine_13721:HG2_Ill_MetaSV_4030:HG2_Ill_GATKHCSBGrefine_4141:HG2_10X_allpass_984:HG2_10X_SVrefine210Xhap12_4329:HG2_PB_assemblyticsPBcR_20881:HG3_Ill_Spiral_6505:HG2_Ill_Spiral_441:HG3_Ill_Krunchall_8282:HG2_Ill_Krunchall_8457:HG3_PB_pbsv_5791;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4329:HG2_10X_allpass_984:HG2_Ill_GATKHCSBGrefine_4141:HG2_Ill_MetaSV_4030:HG2_Ill_SpiralSDKrefine_13721:HG2_Ill_breakscan11_873:HG2_Ill_manta_1702:HG2_Ill_scalpel_5829:HG2_Ill_svaba_7630:HG2_PB_PB10Xdip_24423:HG3_PB_SVrefine2PBcRDovetail_2765:HG3_Ill_svaba_7721:HG3_Ill_scalpel_5926:HG3_Ill_SVrefine2DISCOVARDovetail_4452:HG3_Ill_GATKHCSBGrefine_3991:HG3_Ill_250bpfermikitraw_7993:HG3_Ill_150bpfermikitraw_7816:HG3_10X_allpass_1213:HG2_PB_SVrefine2PBcRplusDovetail_8980:HG2_PB_SVrefine2PB10Xhap12_4313:HG2_PB_SVrefine2Falcon2Bionano_2953;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0477612;ClusterMaxSizeDiff=0.0477612;ClusterMaxEditDist=0.0780781;PBcalls=10;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-169;DistBack=22530;DistForward=-169;DistMin=-169;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:85405342-85405510;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:35:./.:13:10:9:16:./.:0:0:0:0:0/1:38:24:./.:.:.:.:.:.
chr5	85462254	HG2_Ill_svaba_7631	ATATCTTGTAAGATATAAGATATTTGTATCTTGTAAGATATAAGATATTTG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_7771:HG3_PB_HySA_9168:HG2_Ill_SpiralSDKrefine_13722:HG4_Ill_GATKHC_10027:HG4_Ill_GATKHCSBGrefine_4228:HG3_Ill_GATKHC_9875:HG3_Ill_GATKHCSBGrefine_3993:HG2_Ill_GATKHC_9899:HG2_Ill_GATKHCSBGrefine_4142:HG2_Ill_manta_1703:HG3_PB_pbsv_5792:HG4_Ill_svaba_7741:HG4_Ill_Krunchall_8780:HG4_Ill_250bpfermikitraw_8351:HG4_Ill_150bpfermikitraw_8007:HG3_Ill_svaba_7722:HG3_Ill_Krunchall_8283:HG3_Ill_GATKHC_9874:HG3_Ill_GATKHCSBGrefine_3992:HG3_Ill_250bpfermikitraw_7994:HG3_Ill_150bpfermikitraw_7817:HG2_Ill_svaba_7631:HG2_Ill_Krunchall_8458:HG2_Ill_250bpfermikitraw_8287;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7771:HG4_Ill_svaba_7741:HG4_Ill_Krunchall_8780:HG4_Ill_250bpfermikitraw_8351:HG4_Ill_150bpfermikitraw_8007:HG3_Ill_svaba_7722:HG3_Ill_Krunchall_8283:HG3_Ill_GATKHC_9874:HG3_Ill_GATKHCSBGrefine_3992:HG3_Ill_250bpfermikitraw_7994:HG3_Ill_150bpfermikitraw_7817:HG2_Ill_svaba_7631:HG2_Ill_Krunchall_8458:HG2_Ill_250bpfermikitraw_8287;NumExactMatchSVs=14;ClusterMaxShiftDist=0.14433;ClusterMaxSizeDiff=0.14433;ClusterMaxEditDist=0.14433;PBcalls=2;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=12;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=106;REFWIDENED=5:85462230-85462385;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.98;PctRecOverlap=0.7843;SizeDiff=1;StartDistance=-11;EndDistance=-10;GTMatch=0;TruScore=91;MatchId=3183.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:35:0|1:33:3:5:31:./.:0:0:0:0:0/1:23:15:./.:.:.:.:.:.
chr5	87328660	HG2_Ill_scalpel_5838	AACCTGACAGAAATCACCTTAAACAACTGTCCAAAGTTAATTTCACAGGTAATAAAACATATCTACATGCTGTACCTCCATATAATGCACTGAAAATGATACATTACTTTTGTGATGTTTTTCCTAATAATGTATGGCTTAAATATAG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_5995:HG3_PB_HySA_9178:HG4_Ill_MetaSV_4201:HG2_PB_HySA_11061:HG2_Ill_MetaSV_4033:HG4_PB_assemblyticsfalcon_21111:HG4_PB_SVrefine2PBcRDovetail_2972:HG4_PB_SVrefine2Falcon1Dovetail_3616:HG4_Ill_svaba_7760:HG4_Ill_scalpel_5746:HG4_Ill_manta_1483:HG4_Ill_SVrefine2DISCOVARDovetail_4393:HG4_Ill_GATKHCSBGrefine_4236:HG4_Ill_Cortex_2960:HG4_Ill_250bpfermikitraw_8372:HG4_Ill_150bpfermikitraw_8025:HG4_CG_vcfBeta_3904:HG3_PB_SVrefine2Falcon1Dovetail_3712:HG3_Ill_svaba_7730:HG3_Ill_manta_1401:HG3_Ill_MetaSV_4212:HG3_Ill_GATKHCSBGrefine_4000:HG3_Ill_Cortex_2971:HG3_CG_vcfBeta_3328:HG2_PB_assemblyticsfalcon_21629:HG2_PB_SVrefine2PBcRplusDovetail_8984:HG2_PB_SVrefine2PB10Xhap12_4317:HG2_PB_SVrefine2Falcon2Bionano_2956:HG2_PB_SVrefine2Falcon1plusDovetail_9632:HG2_Ill_svaba_7641:HG2_Ill_scalpel_5838:HG2_Ill_manta_1705:HG2_Ill_SpiralSDKrefine_13735:HG2_Ill_SVrefine2DISCOVARplusDovetail_10444:HG2_Ill_GATKHCSBGrefine_4147:HG2_Ill_Cortex_7153:HG2_Ill_250bpfermikitraw_8303:HG2_Ill_150bpfermikitraw_7784:HG2_CG_vcfBeta_3472:HG2_10X_allpass_985:HG2_10X_SVrefine210Xhap12_4337:HG3_PB_assemblyticsfalcon_21563:HG2_PB_assemblyticsPBcR_20897:HG4_Ill_Spiral_495:HG3_Ill_Spiral_6513:HG2_Ill_Spiral_442:HG4_Ill_Krunchall_8800:HG3_Ill_Krunchall_8292:HG2_Ill_breakscan11_874:HG2_Ill_Krunchall_8470:HG3_PB_pbsv_5799:HG2_PB_pbsv_5959;NumClusterSVs=52;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4337:HG2_10X_allpass_985:HG2_CG_vcfBeta_3472:HG2_Ill_150bpfermikitraw_7784:HG2_Ill_250bpfermikitraw_8303:HG2_Ill_Cortex_7153:HG2_Ill_GATKHCSBGrefine_4147:HG2_Ill_SVrefine2DISCOVARplusDovetail_10444:HG2_Ill_SpiralSDKrefine_13735:HG2_Ill_manta_1705:HG2_Ill_scalpel_5838:HG2_Ill_svaba_7641:HG2_PB_SVrefine2Falcon1plusDovetail_9632:HG2_PB_SVrefine2Falcon2Bionano_2956:HG2_PB_SVrefine2PB10Xhap12_4317:HG2_PB_SVrefine2PBcRplusDovetail_8984:HG2_PB_assemblyticsfalcon_21629:HG3_CG_vcfBeta_3328:HG3_Ill_Cortex_2971:HG3_Ill_GATKHCSBGrefine_4000:HG3_Ill_MetaSV_4212:HG3_Ill_manta_1401:HG3_Ill_svaba_7730:HG3_PB_SVrefine2Falcon1Dovetail_3712:HG4_CG_vcfBeta_3904:HG4_Ill_150bpfermikitraw_8025:HG4_Ill_250bpfermikitraw_8372:HG4_Ill_Cortex_2960:HG4_Ill_GATKHCSBGrefine_4236:HG4_Ill_SVrefine2DISCOVARDovetail_4393:HG4_Ill_manta_1483:HG4_Ill_scalpel_5746:HG4_Ill_svaba_7760:HG4_PB_SVrefine2Falcon1Dovetail_3616:HG4_PB_SVrefine2PBcRDovetail_2972:HG4_PB_assemblyticsfalcon_21111;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0135135;ClusterMaxSizeDiff=0.0135135;ClusterMaxEditDist=0.0338983;PBcalls=16;Illcalls=31;TenXcalls=2;CGcalls=3;PBexactcalls=9;Illexactcalls=22;TenXexactcalls=2;CGexactcalls=3;HG2count=24;HG3count=12;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-147;DistBack=65231;DistForward=50072;DistMin=50072;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:87328661-87328807;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:./.:0:0:0:0:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr5	88032012	HG4_10X_allpass_1151	TAAATATTTCAGCAACTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4340:HG3_Ill_Krunchall_8298:HG2_Ill_Krunchall_8476:HG4_PB_assemblyticsfalcon_21117:HG2_PB_assemblyticsfalcon_21635:HG4_Ill_Krunchall_8805:HG2_Ill_Krunchall_8475:HG3_PB_assemblyticsfalcon_21569:HG3_PB_HySA_9182:HG4_PB_pbsv_5997:HG3_PB_pbsv_5802:HG2_PB_pbsv_5961:HG4_Ill_MetaSV_4202:HG2_Ill_tnscope_679:HG2_Ill_MetaSV_4034:HG4_PB_SVrefine2PBcRDovetail_2975:HG4_PB_SVrefine2Falcon1Dovetail_3617:HG4_Ill_manta_1485:HG4_Ill_GATKHCSBGrefine_4239:HG4_10X_allpass_1151:HG3_PB_SVrefine2Falcon1Dovetail_3715:HG3_Ill_scalpel_5938:HG3_Ill_manta_1402:HG3_Ill_GATKHCSBGrefine_4001:HG3_10X_allpass_1218:HG2_PB_SVrefine2Falcon1plusDovetail_9633:HG2_PB_HySA_11066:HG2_Ill_manta_1706:HG2_Ill_breakscan11_875:HG2_Ill_GATKHCSBGrefine_4150:HG2_10X_allpass_987;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4340:HG4_PB_SVrefine2PBcRDovetail_2975:HG4_PB_SVrefine2Falcon1Dovetail_3617:HG4_Ill_manta_1485:HG4_Ill_GATKHCSBGrefine_4239:HG4_10X_allpass_1151:HG3_PB_SVrefine2Falcon1Dovetail_3715:HG3_Ill_scalpel_5938:HG3_Ill_manta_1402:HG3_Ill_GATKHCSBGrefine_4001:HG3_10X_allpass_1218:HG2_PB_SVrefine2Falcon1plusDovetail_9633:HG2_PB_HySA_11066:HG2_Ill_manta_1706:HG2_Ill_breakscan11_875:HG2_Ill_GATKHCSBGrefine_4150:HG2_10X_allpass_987;NumExactMatchSVs=17;ClusterMaxShiftDist=0.102167;ClusterMaxSizeDiff=0.102167;ClusterMaxEditDist=0.102167;PBcalls=12;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=33;DistForward=-331;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:88032013-88032359;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:23:0|1:45:2:2:20:./.:0:0:0:0:0/1:22:19:0/1:25:11:.:.:.
chr5	88043138	HG4_Ill_manta_1486	TTTTTTTTACTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4035:HG2_PB_assemblyticsfalcon_21636:HG2_10X_allpass_988:HG3_PB_pbsv_5803:HG4_PB_assemblyticsfalcon_21118:HG4_PB_pbsv_5998:HG2_PB_pbsv_5962:HG2_Ill_Krunchall_8477:HG4_Ill_scalpel_5749:HG4_Ill_manta_1486:HG4_Ill_MetaSV_4203:HG4_Ill_GATKHCSBGrefine_4240:HG4_10X_allpass_1152:HG3_PB_SVrefine2Falcon1Dovetail_3716:HG3_Ill_scalpel_5939:HG3_Ill_manta_1403:HG3_Ill_MetaSV_4216:HG3_Ill_GATKHCSBGrefine_4002:HG3_10X_allpass_1219:HG2_PB_SVrefine2PB10Xhap12_4321:HG2_PB_SVrefine2Falcon1plusDovetail_9634:HG2_Ill_tnscope_680:HG2_Ill_scalpel_5844:HG2_Ill_manta_1707:HG2_Ill_GATKHCSBGrefine_4151:HG2_10X_SVrefine210Xhap12_4341:HG4_PB_SVrefine2Falcon1Dovetail_3618:HG4_Ill_Spiral_496:HG3_Ill_Spiral_6519:HG2_Ill_breakscan11_876:HG2_Ill_Spiral_443;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4341:HG2_Ill_GATKHCSBGrefine_4151:HG2_Ill_manta_1707:HG2_Ill_scalpel_5844:HG2_Ill_tnscope_680:HG2_PB_SVrefine2Falcon1plusDovetail_9634:HG2_PB_SVrefine2PB10Xhap12_4321:HG3_10X_allpass_1219:HG3_Ill_GATKHCSBGrefine_4002:HG3_Ill_MetaSV_4216:HG3_Ill_manta_1403:HG3_Ill_scalpel_5939:HG3_PB_SVrefine2Falcon1Dovetail_3716:HG4_10X_allpass_1152:HG4_Ill_GATKHCSBGrefine_4240:HG4_Ill_MetaSV_4203:HG4_Ill_manta_1486:HG4_Ill_scalpel_5749;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0941915;ClusterMaxSizeDiff=0.0941915;ClusterMaxEditDist=0.0941915;PBcalls=9;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=841;DistForward=-327;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:88043139-88043481;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:35:0|1:41:0:3:31:./.:0:0:0:0:0/1:30:18:0/1:28:10:.:.:.
chr5	89860421	HG2_Ill_SVrefine2DISCOVARplusDovetail_10456	TGGCGTTTAATATATATATATATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4345:HG3_Ill_Krunchall_8303:HG2_Ill_Krunchall_8488:HG2_10X_allpass_990:HG2_PB_pbsv_5968:HG3_PB_pbsv_5807:HG4_PB_pbsv_6002:HG3_PB_HySA_9189:HG3_Ill_MetaSV_4217:HG2_Ill_tnscope_681:HG4_Ill_manta_1488:HG4_Ill_SVrefine2DISCOVARDovetail_4402:HG4_Ill_MetaSV_4204:HG4_Ill_GATKHCSBGrefine_4246:HG4_10X_allpass_1153:HG3_PB_SVrefine2Falcon1Dovetail_3719:HG3_Ill_scalpel_5943:HG3_Ill_manta_1404:HG3_Ill_GATKHCSBGrefine_4003:HG3_10X_allpass_1221:HG2_PB_SVrefine2PB10Xhap12_4327:HG2_PB_SVrefine2Falcon2Bionano_2964:HG2_PB_SVrefine2Falcon1plusDovetail_9639:HG2_Ill_breakscan11_877:HG2_Ill_SVrefine2DISCOVARplusDovetail_10456:HG2_Ill_MetaSV_4036:HG2_Ill_GATKHCSBGrefine_4153;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4345:HG4_Ill_manta_1488:HG4_Ill_SVrefine2DISCOVARDovetail_4402:HG4_Ill_MetaSV_4204:HG4_Ill_GATKHCSBGrefine_4246:HG4_10X_allpass_1153:HG3_PB_SVrefine2Falcon1Dovetail_3719:HG3_Ill_scalpel_5943:HG3_Ill_manta_1404:HG3_Ill_GATKHCSBGrefine_4003:HG3_10X_allpass_1221:HG2_PB_SVrefine2PB10Xhap12_4327:HG2_PB_SVrefine2Falcon2Bionano_2964:HG2_PB_SVrefine2Falcon1plusDovetail_9639:HG2_Ill_breakscan11_877:HG2_Ill_SVrefine2DISCOVARplusDovetail_10456:HG2_Ill_MetaSV_4036:HG2_Ill_GATKHCSBGrefine_4153;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.0606061;PBcalls=8;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=49848;DistForward=-321;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:89860422-89860756;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:39:0|1:29:1:0:32:./.:0:0:0:0:0/1:36:19:0/1:29:9:.:.:.
chr5	90499772	HG2_PB_SVrefine2PB10Xhap12_4329	TTTATCAAAGTTCATTGAACTATCATATGTAAATTATGCCTTAATTTTAAAAATATGATACTCCAATGATTTCAAAGCATCTTGATTTTAGGGACATTAAAGTGTTTCAAATGTACAAAATGTACAAATCTTTGAAATATAGGATACATTGTAACTTTTAAAGTAAAGGTATATTCACAGTAGGCAAAAGGTGGAAGCAACTCAAGTGTTCATGGCCTGGTGAACGAATAAACAAAATGTGGTCTATACATATCATGGCATACTATTCAACCTTAAAAAGTATGGAAATTCTGACTTATGCAACAACATGGATGAACTTTGAAGATGCACCAAGTGAAATAAGTCAATCACAAAAGGACAATTACTATGATTTCGCTTATATGAGAAACCTAGAATAGTGAAATTCATGGAAACAGAAAACAATAACGGTGGTTGTTGGGGCCAGAGGGAGGGGAAAATGGGGAGTTACTGTTTAATGGTTATGGAGTTTCAGTTGGGAAAGATGAAAAAGTTCTGGAGATGAAGGATGGTGATGGTTGTACAAAGATGTGAATGTACGTGGACTGAATGTCACAGAACTGTACATTTAGAAGGATTGAAATGGTTTTACATTATATACATTTTACTACAGTTTAAAAAAAGAAAAATTAAAACTAGTCCAGACAATAAATATTTCGTATTTCAAATTCGGTCCAAGTGAGTAATCAAAAGCATAGCTCCAAACCAAACAAAGGCAAACAAAAACAGTAAATAGCTAAGTGATTCGAAAGAAGCTATTTCTGTTTGGATCAATTTATGCTGGGCACAAACACTTTCAAAGCTGATAAACAGGGCTCACTGTCTTCCCATTTGGCTTTCAGGCCTCAGAGTGGCTTACAGTTCTTCTAAAAATCAAGAGCCTATCATCCCACCACACAGCCTTACTTCACAATGCAACTTCTCAAAGATAAAAATATACAAACAGCACATGATTTTAATTCACAAAGAGCATAACGTTAACAATAAATCGGAAGAAACACAAACACTGTGTAAGAGACCGCTTTCAAAAAGACAAGTAGACCAGTTCAGGAAGATAAATATAACTATAACATGCCATATGGATTGGAAAAGGTGAATTACACTAATTATTACTCCAATACAAGTCCAGCATTTTCCTCGGAAACTTAAGCAAGATTTTGGAATACATAAAAGTCTGTTTAAAAAAATAAATAAATAAAGTACATCAAAAGTGTAGAAAAGCCCTGTATCAGAAATATGTGTCAGTATGAGCTCATTTTTAATTCAAGAATAGATTGTCCCCAAACATAGAAAACTAAAGAGATCTCCTATAGACTGTTCTAATTTCATGTTATAATAATCATTAGAATCATTGTTTAACTGAGGAGTAAATGTAAACTTTTCTAACAGAGCAAATAAAATTGATTGCAAGGTGTTTATTAAGGCTCTATAATATGTATCAAATTGCTTAAGACACAGATGTTGCCTTGCCCTCTGAGAAAATAAAAACACAGACTACAGGCAGTGAAAGAATAAATAGAAATTAAGTAGGTAATAAAGAGGTGAGAGTAGGCATATACATTGTTTAAAGATCAAAAAGTTTAAGTGAACTCTGTGGCAGCCAGTGAATTATAGTTGGGTTTATACTGTGATAAAATAAATAAAACCAGGCTGAAAGTTAAGTGATCACTTATATAAAAAATATTTATATAGGCCAGGTGTGGTAGCTCATGCTTGTAATCCCAGTACTATGGGAGGCCGAGGTGGCCGGATCACTCCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGATGCAACCCCATCTCTACCAAAAATACAAAATTAGCCAGGCCTGGTGGCATGTACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGTATCACTTGAACCCGGGAGGCGGAGGTTGCGGTGAGCCAATATCACACCATTGCACTTCAGCCTGGGCAACAGGAGTGAAACTCCATCTCCAAAAACAAACAAACAAACAAACAAAAAATTGTATAAAAACATAAAAAGCCAATCCACAAAGATGCTTGATTTCTTCAGATCGATGTGTCCTTTTTTTATGTTTATGTTTTAAATACTTAGTGCGGTCAATATTTCATCCTGAAGGACAGAGCTTGTTTGCCCACGTCACACTTTTCTTATAAGGCTCAAATATCAGCAGTCCCCACTGAGAATTTCAAAAGAAGCTTTCTTGAAACTCACTTAACTTTGCTGGTTGATTTTTGTTGTTTACCTAGTGAAGTACAGTCATGTATGGCTTTATGACAGGGATACATTCAGAGAAATGCTTCA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_682:HG3_10X_allpass_1222:HG3_Ill_Krunchall_8308:HG4_PB_assemblyticsfalcon_21129:HG2_PB_assemblyticsfalcon_21647:HG4_10X_allpass_1154:HG2_10X_allpass_991:HG3_PB_assemblyticsfalcon_21575:HG2_PB_assemblyticsPBcR_20917:HG4_PB_pbsv_6004:HG3_Ill_Krunchall_8307:HG4_PB_SVrefine2PBcRDovetail_2981:HG4_PB_SVrefine2Falcon1Dovetail_3623:HG4_Ill_SVrefine2DISCOVARDovetail_4406:HG4_Ill_MetaSV_4206:HG4_Ill_GATKHCSBGrefine_4247:HG3_PB_pbsv_5809:HG3_PB_SVrefine2Falcon1Dovetail_3720:HG3_Ill_SVrefine2DISCOVARDovetail_4470:HG3_Ill_MetaSV_4218:HG3_Ill_GATKHCSBGrefine_4004:HG2_PB_pbsv_5970:HG2_PB_SVrefine2PBcRplusDovetail_8992:HG2_PB_SVrefine2PB10Xhap12_4329:HG2_PB_SVrefine2Falcon2Bionano_2966:HG2_PB_SVrefine2Falcon1plusDovetail_9641:HG2_Ill_SpiralSDKrefine_13748:HG2_Ill_SVrefine2DISCOVARplusDovetail_10459:HG2_Ill_MetaSV_4037:HG2_Ill_GATKHCSBGrefine_4154:HG2_10X_SVrefine210Xhap12_4347:HG2_Ill_breakscan11_878;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4347:HG2_Ill_GATKHCSBGrefine_4154:HG2_Ill_MetaSV_4037:HG2_Ill_SVrefine2DISCOVARplusDovetail_10459:HG2_Ill_SpiralSDKrefine_13748:HG2_PB_SVrefine2Falcon1plusDovetail_9641:HG2_PB_SVrefine2Falcon2Bionano_2966:HG2_PB_SVrefine2PB10Xhap12_4329:HG2_PB_SVrefine2PBcRplusDovetail_8992:HG2_PB_pbsv_5970:HG3_Ill_GATKHCSBGrefine_4004:HG3_Ill_MetaSV_4218:HG3_Ill_SVrefine2DISCOVARDovetail_4470:HG3_PB_SVrefine2Falcon1Dovetail_3720:HG3_PB_pbsv_5809:HG4_Ill_GATKHCSBGrefine_4247:HG4_Ill_MetaSV_4206:HG4_Ill_SVrefine2DISCOVARDovetail_4406:HG4_PB_SVrefine2Falcon1Dovetail_3623:HG4_PB_SVrefine2PBcRDovetail_2981;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0175251;ClusterMaxSizeDiff=0.0175251;ClusterMaxEditDist=0.0175251;PBcalls=14;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2323;DistBack=20543;DistForward=65593;DistMin=20543;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=5:90499773-90502098;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3188.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:1/1:0:17:0:12:./.:0:0:0:0:1/1:0:36:1/1:2:151:2389:.:.
chr5	90574693	HG2_PB_SVrefine2PB10Xhap12_4330	CTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4348:HG3_PB_HySA_9196:HG4_PB_HySA_8875:HG2_PB_HySA_11090:HG3_PB_assemblyticsfalcon_21577:HG2_PB_assemblyticsPBcR_20919:HG4_PB_assemblyticsfalcon_21131:HG2_PB_assemblyticsfalcon_21649:HG2_PB_pbsv_5971:HG4_Ill_MetaSV_4207:HG3_Ill_MetaSV_4219:HG2_Ill_tnscope_683:HG2_Ill_MetaSV_4038:HG4_PB_pbsv_6005:HG4_PB_SVrefine2PBcRDovetail_2982:HG4_PB_SVrefine2Falcon1Dovetail_3624:HG4_Ill_manta_1489:HG4_Ill_SVrefine2DISCOVARDovetail_4407:HG4_Ill_GATKHCSBGrefine_4248:HG3_PB_pbsv_5810:HG3_PB_SVrefine2Falcon1Dovetail_3721:HG3_Ill_SVrefine2DISCOVARDovetail_4471:HG3_Ill_GATKHCSBGrefine_4005:HG2_PB_SVrefine2PBcRplusDovetail_8993:HG2_PB_SVrefine2PB10Xhap12_4330:HG2_PB_SVrefine2Falcon2Bionano_2967:HG2_PB_SVrefine2Falcon1plusDovetail_9642:HG2_Ill_manta_1709:HG2_Ill_breakscan11_879:HG2_Ill_SVrefine2DISCOVARplusDovetail_10460:HG2_Ill_GATKHCSBGrefine_4155:HG2_10X_allpass_992;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4348:HG4_PB_pbsv_6005:HG4_PB_SVrefine2PBcRDovetail_2982:HG4_PB_SVrefine2Falcon1Dovetail_3624:HG4_Ill_manta_1489:HG4_Ill_SVrefine2DISCOVARDovetail_4407:HG4_Ill_GATKHCSBGrefine_4248:HG3_PB_pbsv_5810:HG3_PB_SVrefine2Falcon1Dovetail_3721:HG3_Ill_SVrefine2DISCOVARDovetail_4471:HG3_Ill_GATKHCSBGrefine_4005:HG2_PB_SVrefine2PBcRplusDovetail_8993:HG2_PB_SVrefine2PB10Xhap12_4330:HG2_PB_SVrefine2Falcon2Bionano_2967:HG2_PB_SVrefine2Falcon1plusDovetail_9642:HG2_Ill_manta_1709:HG2_Ill_breakscan11_879:HG2_Ill_SVrefine2DISCOVARplusDovetail_10460:HG2_Ill_GATKHCSBGrefine_4155:HG2_10X_allpass_992;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0586207;ClusterMaxSizeDiff=0.0586207;ClusterMaxEditDist=0.0586207;PBcalls=17;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-293;DistBack=6983;DistForward=58336;DistMin=6983;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=5:90574694-90574995;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:1/1:0:5:2:33:./.:0:0:0:0:1/1:0:16:./.:.:.:.:.:.
chr5	91480770	HG3_PB_SVrefine2Falcon1Dovetail_3724	TTAAAAGTAAAGTCTATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4350:HG4_PB_assemblyticsfalcon_21135:HG2_PB_assemblyticsfalcon_21653:HG4_10X_allpass_1157:HG3_PB_assemblyticsfalcon_21583:HG2_PB_assemblyticsPBcR_20923:HG4_PB_pbsv_6007:HG4_Ill_Krunchall_8819:HG3_Ill_Krunchall_8315:HG2_Ill_Krunchall_8497:HG3_PB_pbsv_5814:HG4_Ill_GATKHCSBGrefine_4250:HG3_Ill_GATKHCSBGrefine_4008:HG2_PB_pbsv_5973:HG2_Ill_SVrefine2DISCOVARplusDovetail_10468:HG2_Ill_GATKHCSBGrefine_4157:HG2_10X_allpass_993:HG4_PB_HySA_8880:HG4_Ill_Spiral_498:HG4_Ill_MetaSV_4209:HG3_Ill_Spiral_6535:HG2_PB_HySA_11096:HG2_Ill_tnscope_684:HG2_Ill_Spiral_444:HG2_Ill_MetaSV_4040:HG4_PB_SVrefine2PBcRDovetail_2985:HG4_PB_SVrefine2Falcon1Dovetail_3627:HG4_Ill_SVrefine2DISCOVARDovetail_4412:HG3_PB_SVrefine2Falcon1Dovetail_3724:HG2_PB_SVrefine2PBcRplusDovetail_8994:HG2_PB_SVrefine2PB10Xhap12_4332:HG2_PB_SVrefine2Falcon2Bionano_2969:HG2_PB_SVrefine2Falcon1plusDovetail_9644:HG2_Ill_SVrefine2DISCOVARplusDovetail_10467;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4350:HG4_PB_SVrefine2PBcRDovetail_2985:HG4_PB_SVrefine2Falcon1Dovetail_3627:HG4_Ill_SVrefine2DISCOVARDovetail_4412:HG3_PB_SVrefine2Falcon1Dovetail_3724:HG2_PB_SVrefine2PBcRplusDovetail_8994:HG2_PB_SVrefine2PB10Xhap12_4332:HG2_PB_SVrefine2Falcon2Bionano_2969:HG2_PB_SVrefine2Falcon1plusDovetail_9644:HG2_Ill_SVrefine2DISCOVARplusDovetail_10467;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.0952381;PBcalls=16;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-354;DistBack=-358;DistForward=-342;DistMin=-358;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:91480771-91481141;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9887;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=3190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:69:./.:2:0:0:3:./.:0:0:0:0:1/1:0:38:./.:2:16:.:.:.
chr5	93916283	HG2_10X_SVrefine210Xhap12_4359	TAAAAAATGCATAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_445:HG4_Ill_Krunchall_8829:HG2_Ill_Krunchall_8507:HG3_PB_assemblyticsfalcon_21594:HG4_PB_assemblyticsfalcon_21145:HG2_PB_assemblyticsfalcon_21662:HG4_PB_pbsv_6009:HG2_Ill_tnscope_685:HG4_PB_SVrefine2PBcRDovetail_2989:HG4_PB_SVrefine2Falcon1Dovetail_3629:HG4_Ill_scalpel_5764:HG4_Ill_SVrefine2DISCOVARDovetail_4424:HG4_Ill_MetaSV_4210:HG4_Ill_GATKHCSBGrefine_4253:HG4_10X_allpass_1158:HG3_PB_SVrefine2Falcon1Dovetail_3726:HG2_PB_SVrefine2Falcon2Bionano_2971:HG2_PB_SVrefine2Falcon1plusDovetail_9646:HG2_Ill_MetaSV_4041:HG2_Ill_GATKHCSBGrefine_4161:HG2_10X_SVrefine210Xhap12_4359:HG2_PB_pbsv_5975:HG4_Ill_Spiral_500;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4359:HG2_Ill_GATKHCSBGrefine_4161:HG2_Ill_MetaSV_4041:HG2_PB_SVrefine2Falcon1plusDovetail_9646:HG2_PB_SVrefine2Falcon2Bionano_2971:HG3_PB_SVrefine2Falcon1Dovetail_3726:HG4_10X_allpass_1158:HG4_Ill_GATKHCSBGrefine_4253:HG4_Ill_MetaSV_4210:HG4_Ill_SVrefine2DISCOVARDovetail_4424:HG4_Ill_scalpel_5764:HG4_PB_SVrefine2Falcon1Dovetail_3629:HG4_PB_SVrefine2PBcRDovetail_2989;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0937973;ClusterMaxSizeDiff=0.0937973;ClusterMaxEditDist=0.0937973;PBcalls=10;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=29862;DistForward=18415;DistMin=18415;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:93916284-93916636;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:18:0|1:24:0:0:15:./.:0:0:0:0:0/1:22:19:0/1:25:10:.:.:.
chr5	94109625	HG3_PB_SVrefine2Falcon1Dovetail_3728	TGAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4361:HG2_10X_allpass_994:HG3_10X_allpass_1226:HG3_Ill_Krunchall_8321:HG2_PB_pbsv_5977:HG2_Ill_Krunchall_8508:HG3_PB_assemblyticsfalcon_21596:HG3_Ill_Spiral_6541:HG3_PB_pbsv_5817:HG2_Ill_tnscope_686:HG3_PB_SVrefine2Falcon1Dovetail_3728:HG3_Ill_scalpel_5959:HG3_Ill_MetaSV_4222:HG3_Ill_GATKHCSBGrefine_4010:HG2_PB_SVrefine2PB10Xhap12_4335:HG2_Ill_scalpel_5871:HG2_Ill_manta_1712:HG2_Ill_breakscan11_880:HG2_Ill_MetaSV_4042:HG2_Ill_GATKHCSBGrefine_4162;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4361:HG3_PB_SVrefine2Falcon1Dovetail_3728:HG3_Ill_scalpel_5959:HG3_Ill_MetaSV_4222:HG3_Ill_GATKHCSBGrefine_4010:HG2_PB_SVrefine2PB10Xhap12_4335:HG2_Ill_scalpel_5871:HG2_Ill_manta_1712:HG2_Ill_breakscan11_880:HG2_Ill_MetaSV_4042:HG2_Ill_GATKHCSBGrefine_4162;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0623053;ClusterMaxSizeDiff=0.0623053;ClusterMaxEditDist=0.0623053;PBcalls=5;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-48;DistForward=52522;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=5:94109626-94109962;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:29:0|1:34:4:4:15:./.:0:0:0:0:0/1:19:18:0/1:24:11:.:.:.
chr5	94648869	HG2_PB_SVrefine2Falcon2Bionano_2973	CCCAGCAGCAGGTGGAGAAAACCCAGAAATTCTGCTATTTGGCATCGCTATTGTTAAGTACAAAACCATCCTGCCTTCTCAAGAGCCTCCTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4364:HG4_PB_HySA_8893:HG3_PB_HySA_9212:HG2_PB_HySA_11110:HG4_Ill_Spiral_501:HG2_PB_pbsv_5978:HG3_PB_pbsv_5818:HG4_PB_pbsv_6010:HG4_PB_SVrefine2PBcRDovetail_2991:HG4_PB_SVrefine2Falcon1Dovetail_3632:HG4_Ill_svaba_7785:HG4_Ill_GATKHCSBGrefine_4255:HG4_Ill_250bpfermikitraw_8404:HG4_Ill_150bpfermikitraw_8057:HG3_PB_SVrefine2Falcon1Dovetail_3730:HG3_Ill_svaba_7755:HG3_Ill_GATKHCSBGrefine_4011:HG3_Ill_250bpfermikitraw_8034:HG3_Ill_150bpfermikitraw_7857:HG2_PB_SVrefine2PBcRplusDovetail_8999:HG2_PB_SVrefine2PB10Xhap12_4337:HG2_PB_SVrefine2Falcon2Bionano_2973:HG2_PB_SVrefine2Falcon1plusDovetail_9649:HG2_Ill_svaba_7671:HG2_Ill_SpiralSDKrefine_13766:HG2_Ill_SVrefine2DISCOVARplusDovetail_10481:HG2_Ill_GATKHCSBGrefine_4163:HG2_Ill_250bpfermikitraw_8343:HG2_Ill_150bpfermikitraw_7822;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4364:HG4_PB_SVrefine2PBcRDovetail_2991:HG4_PB_SVrefine2Falcon1Dovetail_3632:HG4_Ill_svaba_7785:HG4_Ill_GATKHCSBGrefine_4255:HG4_Ill_250bpfermikitraw_8404:HG4_Ill_150bpfermikitraw_8057:HG3_PB_SVrefine2Falcon1Dovetail_3730:HG3_Ill_svaba_7755:HG3_Ill_GATKHCSBGrefine_4011:HG3_Ill_250bpfermikitraw_8034:HG3_Ill_150bpfermikitraw_7857:HG2_PB_SVrefine2PBcRplusDovetail_8999:HG2_PB_SVrefine2PB10Xhap12_4337:HG2_PB_SVrefine2Falcon2Bionano_2973:HG2_PB_SVrefine2Falcon1plusDovetail_9649:HG2_Ill_svaba_7671:HG2_Ill_SpiralSDKrefine_13766:HG2_Ill_SVrefine2DISCOVARplusDovetail_10481:HG2_Ill_GATKHCSBGrefine_4163:HG2_Ill_250bpfermikitraw_8343:HG2_Ill_150bpfermikitraw_7822;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0444444;PBcalls=13;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-91;DistBack=55334;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=97;REFWIDENED=5:94648870-94649057;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:74:1/1:2:13:1:10:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr5	95343311	HG4_Ill_SVrefine2DISCOVARDovetail_4427	TAAGAAGAGGAAGATGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4366:HG4_PB_assemblyticsfalcon_21156:HG2_PB_assemblyticsfalcon_21673:HG3_PB_HySA_9215:HG4_Ill_Krunchall_8837:HG3_Ill_Krunchall_8327:HG2_Ill_Krunchall_8516:HG3_PB_assemblyticsfalcon_21606:HG2_PB_assemblyticsPBcR_20941:HG3_PB_pbsv_5821:HG4_PB_pbsv_6014:HG2_PB_pbsv_5981:HG4_Ill_MetaSV_4213:HG3_Ill_MetaSV_4223:HG2_PB_HySA_11115:HG2_Ill_tnscope_687:HG2_Ill_MetaSV_4044:HG4_PB_SVrefine2PBcRDovetail_2994:HG4_PB_SVrefine2Falcon1Dovetail_3634:HG4_PB_HySA_8898:HG4_Ill_svaba_7788:HG4_Ill_scalpel_5766:HG4_Ill_SVrefine2DISCOVARDovetail_4427:HG4_Ill_GATKHCSBGrefine_4256:HG4_10X_allpass_1159:HG3_PB_SVrefine2Falcon1Dovetail_3731:HG3_Ill_svaba_7759:HG3_Ill_SVrefine2DISCOVARDovetail_4497:HG3_Ill_GATKHCSBGrefine_4012:HG3_10X_allpass_1227:HG2_PB_SVrefine2PBcRplusDovetail_9002:HG2_PB_SVrefine2PB10Xhap12_4339:HG2_PB_SVrefine2Falcon2Bionano_2976:HG2_PB_SVrefine2Falcon1plusDovetail_9651:HG2_Ill_svaba_7676:HG2_Ill_manta_1713:HG2_Ill_breakscan11_881:HG2_Ill_SVrefine2DISCOVARplusDovetail_10483:HG2_Ill_GATKHCSBGrefine_4164:HG2_10X_allpass_995;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4366:HG4_PB_SVrefine2PBcRDovetail_2994:HG4_PB_SVrefine2Falcon1Dovetail_3634:HG4_PB_HySA_8898:HG4_Ill_svaba_7788:HG4_Ill_scalpel_5766:HG4_Ill_SVrefine2DISCOVARDovetail_4427:HG4_Ill_GATKHCSBGrefine_4256:HG4_10X_allpass_1159:HG3_PB_SVrefine2Falcon1Dovetail_3731:HG3_Ill_svaba_7759:HG3_Ill_SVrefine2DISCOVARDovetail_4497:HG3_Ill_GATKHCSBGrefine_4012:HG3_10X_allpass_1227:HG2_PB_SVrefine2PBcRplusDovetail_9002:HG2_PB_SVrefine2PB10Xhap12_4339:HG2_PB_SVrefine2Falcon2Bionano_2976:HG2_PB_SVrefine2Falcon1plusDovetail_9651:HG2_Ill_svaba_7676:HG2_Ill_manta_1713:HG2_Ill_breakscan11_881:HG2_Ill_SVrefine2DISCOVARplusDovetail_10483:HG2_Ill_GATKHCSBGrefine_4164:HG2_10X_allpass_995;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0833333;ClusterMaxEditDist=0.0833333;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-354;DistBack=5834;DistForward=50584;DistMin=5834;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:95343312-95343680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:1:19:0:21:./.:0:0:0:0:1/1:0:44:./.:1:14:.:.:.
chr5	95909715	HG4_Ill_manta_1492	ACATTTGCCCACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	A	20	PASS	ClusterIDs=HG3_PB_HySA_9223:HG3_Ill_Krunchall_8333:HG2_Ill_Krunchall_8521:HG4_PB_assemblyticsfalcon_21160:HG2_PB_assemblyticsfalcon_21681:HG3_PB_assemblyticsfalcon_21616:HG2_Ill_breakscan11_882:HG2_PB_pbsv_5985:HG3_Ill_MetaSV_4225:HG2_Ill_tnscope_688:HG2_Ill_MetaSV_4047:HG4_PB_pbsv_6016:HG4_PB_SVrefine2PBcRDovetail_2996:HG4_PB_SVrefine2Falcon1Dovetail_3636:HG4_Ill_scalpel_5770:HG4_Ill_manta_1492:HG4_Ill_MetaSV_4215:HG4_Ill_GATKHCSBGrefine_4258:HG3_PB_pbsv_5825:HG3_PB_SVrefine2Falcon1Dovetail_3734:HG3_Ill_manta_1408:HG3_Ill_SVrefine2DISCOVARDovetail_4502:HG3_Ill_GATKHCSBGrefine_4015:HG3_10X_allpass_1228:HG2_PB_SVrefine2PB10Xhap12_4341:HG2_PB_SVrefine2Falcon2Bionano_2977:HG2_PB_SVrefine2Falcon1plusDovetail_9654:HG2_Ill_scalpel_5876:HG2_Ill_manta_1715:HG2_Ill_GATKHCSBGrefine_4167:HG2_10X_allpass_996:HG2_10X_SVrefine210Xhap12_4369;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4369:HG2_10X_allpass_996:HG2_Ill_GATKHCSBGrefine_4167:HG2_Ill_manta_1715:HG2_Ill_scalpel_5876:HG2_PB_SVrefine2Falcon1plusDovetail_9654:HG2_PB_SVrefine2Falcon2Bionano_2977:HG2_PB_SVrefine2PB10Xhap12_4341:HG3_10X_allpass_1228:HG3_Ill_GATKHCSBGrefine_4015:HG3_Ill_SVrefine2DISCOVARDovetail_4502:HG3_Ill_manta_1408:HG3_PB_SVrefine2Falcon1Dovetail_3734:HG3_PB_pbsv_5825:HG4_Ill_GATKHCSBGrefine_4258:HG4_Ill_MetaSV_4215:HG4_Ill_manta_1492:HG4_Ill_scalpel_5770:HG4_PB_SVrefine2Falcon1Dovetail_3636:HG4_PB_SVrefine2PBcRDovetail_2996:HG4_PB_pbsv_6016;NumExactMatchSVs=21;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.105263;PBcalls=13;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-346;DistBack=35254;DistForward=43432;DistMin=35254;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:95909716-95910077;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:42:0|1:30:0:3:38:./.:0:0:0:0:0/1:28:24:./.:38:4:.:.:.
chr5	96325017	HG2_Ill_SpiralSDKrefine_13771	TTATATATAATATATAATTATATATAATATATAATATATTATATATTATATATAATTATATATTATATATTATATACAATATATTATATATTATATATAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_5988:HG3_Ill_GATKHC_9932:HG3_PB_HySA_9227:HG3_Ill_GATKHCSBGrefine_4018:HG2_Ill_GATKHC_9963:HG2_Ill_GATKHCSBGrefine_4170:HG3_Ill_manta_1409:HG3_Ill_SVrefine2DISCOVARDovetail_4507:HG2_PB_assemblyticsfalcon_21685:HG2_PB_SVrefine2Falcon2Bionano_2980:HG2_PB_SVrefine2Falcon1plusDovetail_9657:HG2_Ill_manta_1716:HG2_Ill_SVrefine2DISCOVARplusDovetail_10489:HG2_10X_SVrefine210Xhap12_4373:HG3_Ill_svaba_7766:HG3_Ill_scalpel_5968:HG3_Ill_Krunchall_8335:HG3_Ill_250bpfermikitraw_8045:HG3_Ill_150bpfermikitraw_7869:HG3_10X_allpass_1229:HG2_Ill_svaba_7684:HG2_Ill_scalpel_5879:HG2_Ill_SpiralSDKrefine_13771:HG2_Ill_Krunchall_8524:HG2_Ill_250bpfermikitraw_8356:HG2_Ill_150bpfermikitraw_7829:HG2_10X_allpass_997:HG3_PB_pbsv_5828:HG2_PB_HySA_11122:HG3_Ill_svaba_7765:HG2_Ill_svaba_7683;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_997:HG2_Ill_150bpfermikitraw_7829:HG2_Ill_250bpfermikitraw_8356:HG2_Ill_Krunchall_8524:HG2_Ill_SpiralSDKrefine_13771:HG2_Ill_scalpel_5879:HG2_Ill_svaba_7684:HG3_10X_allpass_1229:HG3_Ill_150bpfermikitraw_7869:HG3_Ill_250bpfermikitraw_8045:HG3_Ill_Krunchall_8335:HG3_Ill_scalpel_5968:HG3_Ill_svaba_7766;NumExactMatchSVs=13;ClusterMaxShiftDist=0.4;ClusterMaxSizeDiff=0.4;ClusterMaxEditDist=0.4;PBcalls=7;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-99;DistBack=-107;DistForward=7428;DistMin=-107;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=99;REFWIDENED=5:96324963-96325160;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9899;PctRecOverlap=0.98;SizeDiff=1;StartDistance=-2;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=3196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:46:./.:25:24:19:21:./.:0:0:0:0:0/1:34:41:./.:.:.:.:.:.
chr5	97401561	HG3_Ill_Cortex_2982	GAGCCAAATATCTGCACTTTGGTTCCTGCCACTACCTCATATCTAATATCCTCACTCTGCCAGTCTGCCAAAAATTACTGGGAAAAACTTCTCCTTATGAGATTTCTGCTCATATCCTCAGTAGGGTTGCTAAAAGTGACCACAATCTGCCCCTTTCCTATCCCTCTATGGATCAACTATATTCCCTGACATTCAAAAACCACTAAACTTTCACTTGAGTCTCATAAAGCTCCTGCTCTTCTGTTTTGATGTAGCCATACTTAGATTATTGCAGTTTTCTACCATGCTCCCTCTCAGTTAACATATTTCAAATTTATTATATTTCTTTATATGAAACTCCTTGCCACCATCGTCACAAGACATTTTCTCTTCCAAGAAAGCTTCCTAGACCCATCCAAGTCTTAAGTTCGGCATTCTGTTTTGTGCTTCTATAGTGTTCCAATCTTTCACTATCTTAGCCCTTCTCAGACTCTTGTTTCCTTTATTTGTTCGTGTTCGTCTTCCATTGAACTGAAAGGTCTACAATGTCAGGGATTTGCTCTTATTCACTTAAATATTGTTAATGTATATCACACGTATGTAGCAGGCAATCAATAGCTTTCTGACTTTATAAATGATACATGCTGAATAGATGAATTGGTTAATAAGTGAATAGGGTTGCCAGTCTATATCTAATATATCACATCATATAATACATATATTTGTAACCCTAAAAATTCCTACATATATTTATGACACATATAAAATGCTTCAACTAGTAATATTTTCATAGTCAAGTTCTTAACATATATTATTTTCTAAATTAAAGATGTGCTGCTAACTTAGTTCCCAGATTTTGATTCACCAACATTGGCAAGACTCTCCTGATTCAGAAACTTCATAGTTGATCTTTTGGGAATCTACAGAATTTCATTTTCAGCATCTGTATGCAACGCAGTATAAGTCTTTATTTCCAAATAGATCATCTCATTTAAAAGGCTGGAAGTCCTTTGGGAAGTAGATAAACCATTGGAGCAGACCCTAAATAACGAGACACAAAGTCCTAGAGTGAGCCTCCCATGCAAATACTCTGTTTTTATTCAATACAGCAGGCTTTTCATCATTATTTGTTTTGTGCTGACTGCAGAAACCCATTTCTGTCTTTCTCTCTGCATCACTAATTAAAAGCTTTAAGGAGTTAAGACTCAATACAGCAAAGTA	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_689:HG4_Ill_Krunchall_8856:HG2_Ill_Krunchall_8536:HG2_10X_allpass_998:HG3_PB_assemblyticsfalcon_21631:HG2_PB_assemblyticsPBcR_20956:HG4_PB_assemblyticsfalcon_21173:HG2_PB_assemblyticsfalcon_21697:HG4_Ill_MetaSV_4220:HG4_Ill_GATKHCSBGrefine_4264:HG4_Ill_Cortex_2970:HG4_10X_allpass_1161:HG3_Ill_Cortex_2982:HG2_PB_pbsv_5994:HG2_Ill_breakscan11_884:HG2_Ill_SpiralSDKrefine_13781:HG2_Ill_MetaSV_4051:HG2_Ill_GATKHCSBGrefine_4174:HG2_Ill_Cortex_7176:HG4_PB_pbsv_6023:HG4_PB_SVrefine2Falcon1Dovetail_3644:HG3_PB_SVrefine2Falcon1Dovetail_3740:HG2_PB_SVrefine2PBcRplusDovetail_9008:HG2_PB_SVrefine2PB10Xhap12_4345:HG2_PB_SVrefine2Falcon1plusDovetail_9660:HG2_10X_SVrefine210Xhap12_4377;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_Cortex_7176:HG2_Ill_GATKHCSBGrefine_4174:HG2_Ill_MetaSV_4051:HG2_Ill_SpiralSDKrefine_13781:HG2_Ill_breakscan11_884:HG2_PB_pbsv_5994:HG3_Ill_Cortex_2982:HG4_10X_allpass_1161:HG4_Ill_Cortex_2970:HG4_Ill_GATKHCSBGrefine_4264:HG4_Ill_MetaSV_4220;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0125366;ClusterMaxSizeDiff=0.0125366;ClusterMaxEditDist=0.0125471;PBcalls=11;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=3;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1199;DistBack=102850;DistForward=-1197;DistMin=-1197;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=5:97401556-97402762;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:60:./.:27:15:9:19:./.:0:0:0:0:0/1:65:20:0/1:110:46:1238:.:.
chr5	98345118	HG2_PB_SVrefine2PB10Xhap12_4349	TCACGAGAACTCATTCACTATTGTGAGGACAGCACAAAGCTATAAGATTAACAACCATGACCCAAACACCTCCATCCCGGCCTGATCTCCAACACTAGGGATTAAATTTTAACATGAGACTTGGAAGGGAAAACTATGCAAACCATATTATTCCACCCTGGCACCCCAAATCTCATGTGCTTCTCACATTTCAAAACACAATTATCCCTTCTCCCAAAATGACATTGGTCCTCCGAAGTCTCAACTCACTTCAGCCCCAACTCAAAAGTCCCAAAGCCCAAAGTCTTATCTGGAGATGAGTTATGTCCACCTATGAGCCTGTGAAATCAAAGACAAATAATTTACTTGCAAGATACAATGGGGGTAGAGGCATTGGATAAACATTGCCTTCCAAAAGGGAGAAACTGGTCAAAAGAAAGGGGCATCAGAGCCCATGCAGATCTGAAACTCAGCAGAATAGTCATTAAATCTTAAAGCTCCAAAATAATCTCCTTTCACTCCATGAACTGCATCCAGAGCACACTGGTGCAAGGAGTGGTCTCCCAAGCCTTTTGGCAGCTCCACCCCTGTGCCTCTGCAGGCTGCAGTCCCCACAACTGCTCTCAAAGGCTGGAGTTGAGAGATTGTGTCTTTTCCAGGTGCCAGGGCACAAGCTACACAAGTGGCTCTACCATTCTAAGGTCTAGAGGATAGTGGCCCCCTTCCCACGGCTCCACTAGGCAGTCCCCAGTGGGGACTCTGTGTGGGCTCTGACCCCACATTTCTCCTTTGCACTGCCCTAGTAAATTTCTCTGTGTGGGGCCCCACATTGTGGCAGGCTTCTGCCAGGCACTCTGGCTTTCCAATACATCGCTTTCCAATATATCGCTGAAATCCAGGGGGAAGTTGCTAAGCATCTTTCACGTTTACGCTGTTTACCTGCAGGCTTAAAACCACATGGAGGCTGGCAAAACTTATGGCTTGCACCCTCTGGAGTGGTGGACCGAGCTGTATTTGGGGCCCTTTGAGCAGAGATTGGAGCTGAAGTTGCCTAGATGCAGGGAGCTGTGTCCCCAGGCTGCATAGTGTCCTTGTGGCCTGTGATGGGAGGAGCTGCCTTAAAGGTCTCTGAAATGCCTTCAAGGCCTTTTTTCCATTGTCTTGCAGATTAGCACTTGGCTCACCTTCAGTCATGCTAATTTCTTTAGCAAGTGGTTGCTCCACAGCCACTTGGATTCTTCCCCTGAAAATGGGCTTTTTTTTTTTTCCTACTACATGGTTAGGCTACAAATTTTCCAAACTTTTATGCTCTGCTTCCCATTCATATTAATATAATTTCCAACTTTAAGCCATTTCTTTGCTCCTCTATCTGAACATAGGTTGGTAGAAGCAGTCAGGCCACACTGTGAATGCTTTGTTACTTAGAAATTTTGTCTCACACGTCCGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAGCAACAAGGCTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTGAAAAGAGAGTCAGCAAAGGGTGGTGGATTATCATTAGTTCTTATAGATTTTGGGATAGGCAGTGGAATTAGGAGCAATGTTTTGAGGGCAGGGGATGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGATGGGGGAGATGACAAAGTACATTGATCAGTTAGGGTGGGGCAGAAACAAATCACAATGGTGGAATGTCATCAGTTAAGGCTATTTTCACTTCTTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGTATTCGTGCAGGTCACAGGGGATATGACAGCTTAGCTGTGCTCAGAGGCCTGACATTCCTGCCTTCCTATATTCATAAGAAAAATAAAATGAAATAGTGGTAAAGTGTTGAGGCGGCGAAAATTTTTGGGAGTGGTATGAAGAGATAATAGGCAATGTTTCTCAGGGCTGCTGCAAGCAGAACTAGGGGTGACGTGGGAACCTAGAGTGGGAAAGATTAAGCTGAAGGAAGATTTTGTGGTAAGGGGTGATATTGCAGGGTTGTTAGAAGAAGCATTTGTCATATAGAATTATTGGTGATGGCCTAGATGTGGTTTTGTATGAATTGAGAAACTAAACGAAAGACACAAGGTCTGAATAAAAGAAGCAGAAAAATAGGTATTAAAGGACTAAGAATTGGGAGTACTGGGAGTACCCAGGACATCCAATTAGAGAGTGTCCAGGGGAGTTCAACATTATTGTTTGCTTGGTTGGTGAGTTTTTGGGCTCTATCCTTGAGTTTTTTTATGTTGTCATATACCAGGCCAGATTGATTTAGGTAAAAACAACACTCTTCATTTAAAAATATACAGAGTCCTCT	AC	20	PASS	ClusterIDs=HG4_PB_pbsv_6025:HG3_PB_pbsv_5836:HG2_Ill_tnscope_690:HG4_PB_SVrefine2PBcRDovetail_3001:HG4_Ill_SVrefine2DISCOVARDovetail_4441:HG3_PB_SVrefine2PBcRDovetail_2772:HG2_PB_assemblyticsfalcon_21704:HG2_PB_assemblyticsPBcR_20962:HG2_PB_SVrefine2PBcRplusDovetail_9010:HG2_PB_SVrefine2PB10Xhap12_4349:HG2_PB_SVrefine2Falcon1plusDovetail_9662:HG2_PB_PB10Xdip_24476:HG2_PB_PB10Xdip_24475:HG2_Ill_SVrefine2DISCOVARplusDovetail_10500:HG2_10X_SVrefine210Xhap12_4380:HG2_Ill_SpiralSDKrefine_13786:HG4_10X_allpass_1162:HG3_10X_allpass_1230:HG2_PB_pbsv_5996:HG2_10X_allpass_999:HG4_Ill_MetaSV_4221:HG2_Ill_MetaSV_4052:HG4_Ill_Krunchall_8862:HG3_Ill_Krunchall_8354:HG2_Ill_Krunchall_8541:HG3_Ill_MetaSV_4232;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4380:HG2_Ill_SVrefine2DISCOVARplusDovetail_10500:HG2_PB_PB10Xdip_24475:HG2_PB_PB10Xdip_24476:HG2_PB_SVrefine2Falcon1plusDovetail_9662:HG2_PB_SVrefine2PB10Xhap12_4349:HG2_PB_SVrefine2PBcRplusDovetail_9010:HG2_PB_assemblyticsPBcR_20962:HG2_PB_assemblyticsfalcon_21704:HG3_PB_SVrefine2PBcRDovetail_2772:HG4_Ill_SVrefine2DISCOVARDovetail_4441:HG4_PB_SVrefine2PBcRDovetail_3001;NumExactMatchSVs=12;ClusterMaxShiftDist=0.014346;ClusterMaxSizeDiff=0.014346;ClusterMaxEditDist=0.014346;PBcalls=12;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2363;DistBack=-192;DistForward=-2168;DistMin=-2168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:98345118-98347482;PctSeqSimilarity=0.9998;PctSizeSimilarity=1;PctRecOverlap=0.9996;SizeDiff=0;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:81:./.:6:13:0:10:./.:0:0:0:0:1/1:0:23:1/1:3:145:2334:.:.
chr5	99174314	HG3_Ill_manta_1414	TTCTTTATCATTTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_692:HG2_PB_HySA_11152:HG2_Ill_Krunchall_8546:HG4_Ill_Krunchall_8869:HG3_Ill_Krunchall_8359:HG4_PB_pbsv_6030:HG4_PB_SVrefine2PBcRDovetail_3004:HG4_Ill_svaba_7813:HG4_Ill_scalpel_5785:HG4_Ill_manta_1494:HG4_Ill_SVrefine2DISCOVARDovetail_4444:HG4_Ill_GATKHCSBGrefine_4269:HG4_10X_allpass_1163:HG3_PB_pbsv_5840:HG3_Ill_svaba_7786:HG3_Ill_manta_1414:HG3_Ill_SVrefine2DISCOVARDovetail_4518:HG3_Ill_GATKHCSBGrefine_4031:HG3_10X_allpass_1232:HG2_PB_pbsv_6002:HG2_PB_SVrefine2PBcRplusDovetail_9015:HG2_PB_SVrefine2PB10Xhap12_4358:HG2_PB_SVrefine2Falcon1plusDovetail_9666:HG2_Ill_svaba_7702:HG2_Ill_scalpel_5891:HG2_Ill_manta_1719:HG2_Ill_SVrefine2DISCOVARplusDovetail_10505:HG2_Ill_MetaSV_4055:HG2_Ill_GATKHCSBGrefine_4188:HG2_10X_SVrefine210Xhap12_4382:HG2_Ill_breakscan11_885:HG4_Ill_MetaSV_4224:HG3_Ill_MetaSV_4236;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4382:HG2_Ill_GATKHCSBGrefine_4188:HG2_Ill_MetaSV_4055:HG2_Ill_SVrefine2DISCOVARplusDovetail_10505:HG2_Ill_manta_1719:HG2_Ill_scalpel_5891:HG2_Ill_svaba_7702:HG2_PB_SVrefine2Falcon1plusDovetail_9666:HG2_PB_SVrefine2PB10Xhap12_4358:HG2_PB_SVrefine2PBcRplusDovetail_9015:HG2_PB_pbsv_6002:HG3_10X_allpass_1232:HG3_Ill_GATKHCSBGrefine_4031:HG3_Ill_SVrefine2DISCOVARDovetail_4518:HG3_Ill_manta_1414:HG3_Ill_svaba_7786:HG3_PB_pbsv_5840:HG4_10X_allpass_1163:HG4_Ill_GATKHCSBGrefine_4269:HG4_Ill_SVrefine2DISCOVARDovetail_4444:HG4_Ill_manta_1494:HG4_Ill_scalpel_5785:HG4_Ill_svaba_7813:HG4_PB_SVrefine2PBcRDovetail_3004;NumExactMatchSVs=24;ClusterMaxShiftDist=0.00634921;ClusterMaxSizeDiff=0.00634921;ClusterMaxEditDist=0.00636943;PBcalls=8;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=-315;DistForward=-300;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8828;REFWIDENED=5:99165502-99184371;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:68:1/1:3:28:2:24:./.:0:0:0:0:1/1:0:58:./.:2:14:.:.:.
chr5	99205808	HG3_Ill_GATKHC_9960	TAATGTCCTGAGTTTCCCTGCAAGCAGAGTATAAAACTTGGATAAACGTAGATTATTATAAGGCAATACTACAAAGTGGAAGCATGAAGGTGCTTCTATTCTATAATCTTATACTGAGTGTCTATTTTCTAGGGCAGAAAG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4385:HG2_Ill_Krunchall_8547:HG2_PB_SVrefine2PB10Xhap12_4361:HG2_PB_PB10Xdip_24491:HG4_PB_pbsv_6031:HG2_PB_pbsv_6004:HG3_PB_pbsv_5841:HG4_Ill_GATKHC_10119:HG4_Ill_GATKHCSBGrefine_4270:HG4_10X_allpass_1164:HG3_Ill_GATKHC_9960:HG3_Ill_GATKHCSBGrefine_4032:HG2_Ill_SpiralSDKrefine_13789:HG2_Ill_GATKHC_9990:HG2_Ill_GATKHCSBGrefine_4189:HG4_PB_assemblyticsfalcon_21184:HG3_PB_SVrefine2Falcon1Dovetail_3745:HG2_PB_SVrefine2PBcRplusDovetail_9017:HG2_PB_SVrefine2PB10Xhap12_4360:HG2_PB_SVrefine2Falcon1plusDovetail_9668;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4189:HG2_Ill_GATKHC_9990:HG2_Ill_SpiralSDKrefine_13789:HG3_Ill_GATKHCSBGrefine_4032:HG3_Ill_GATKHC_9960:HG4_10X_allpass_1164:HG4_Ill_GATKHCSBGrefine_4270:HG4_Ill_GATKHC_10119;NumExactMatchSVs=8;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.110294;PBcalls=10;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-140;DistBack=-99;DistForward=1395;DistMin=-99;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=139;REFWIDENED=5:99205748-99206026;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:53:1|0:5:49:18:1:./.:0:0:0:0:0/1:34:21:./.:.:.:.:.:.
chr5	99608147	HG3_Ill_manta_1415	GAAGAAAAGTTAGAAGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAA	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3748:HG4_Ill_Krunchall_8872:HG3_Ill_Krunchall_8363:HG2_Ill_Krunchall_8550:HG4_PB_HySA_8942:HG3_PB_pbsv_5845:HG2_PB_pbsv_6008:HG2_PB_HySA_11158:HG3_PB_assemblyticsfalcon_21644:HG2_PB_PB10Xdip_24496:HG3_PB_SVrefine2PBcRDovetail_2780:HG2_PB_SVrefine2PB10Xhap12_4368:HG3_PB_HySA_9260:HG3_Ill_MetaSV_4238:HG2_Ill_tnscope_694:HG2_Ill_MetaSV_4057:HG4_PB_pbsv_6035:HG4_Ill_manta_1495:HG4_Ill_GATKHCSBGrefine_4273:HG4_10X_allpass_1165:HG3_Ill_manta_1415:HG3_Ill_GATKHCSBGrefine_4035:HG3_10X_allpass_1233:HG2_PB_SVrefine2PB10Xhap12_4367:HG2_Ill_manta_1720:HG2_Ill_GATKHCSBGrefine_4192:HG2_10X_allpass_1001:HG2_10X_SVrefine210Xhap12_4388:HG2_PB_SVrefine2PBcRplusDovetail_9020:HG2_PB_assemblyticsPBcR_20971;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4388:HG2_10X_allpass_1001:HG2_Ill_GATKHCSBGrefine_4192:HG2_Ill_manta_1720:HG2_PB_SVrefine2PB10Xhap12_4367:HG3_10X_allpass_1233:HG3_Ill_GATKHCSBGrefine_4035:HG3_Ill_manta_1415:HG4_10X_allpass_1165:HG4_Ill_GATKHCSBGrefine_4273:HG4_Ill_manta_1495:HG4_PB_pbsv_6035;NumExactMatchSVs=12;ClusterMaxShiftDist=0.246711;ClusterMaxSizeDiff=0.246711;ClusterMaxEditDist=0.246711;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=7288;DistForward=7660;DistMin=7288;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:99608148-99608476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:33:0|1:35:1:0:30:./.:0:0:0:0:0/1:34:18:0/1:19:5:.:.:.
chr5	99759460	HG3_Ill_manta_1416	TAAAAACACAGATAAACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGCCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_886:HG2_Ill_Krunchall_8553:HG3_PB_assemblyticsfalcon_21646:HG2_PB_assemblyticsfalcon_21715:HG2_PB_assemblyticsPBcR_20972:HG4_PB_assemblyticsfalcon_21190:HG4_PB_pbsv_6038:HG4_Ill_Krunchall_8874:HG3_Ill_Krunchall_8365:HG2_Ill_Krunchall_8552:HG2_PB_HySA_11161:HG2_PB_pbsv_6010:HG3_PB_pbsv_5847:HG4_Ill_MetaSV_4228:HG3_Ill_MetaSV_4239:HG2_Ill_tnscope_695:HG2_Ill_MetaSV_4058:HG4_PB_SVrefine2PBcRDovetail_3008:HG4_PB_SVrefine2Falcon1Dovetail_3647:HG4_Ill_scalpel_5788:HG4_Ill_manta_1496:HG4_Ill_SVrefine2DISCOVARDovetail_4446:HG4_Ill_GATKHCSBGrefine_4274:HG4_10X_allpass_1166:HG3_PB_SVrefine2Falcon1Dovetail_3750:HG3_Ill_scalpel_5987:HG3_Ill_manta_1416:HG3_Ill_SVrefine2DISCOVARDovetail_4520:HG3_Ill_GATKHCSBGrefine_4036:HG3_10X_allpass_1234:HG2_PB_SVrefine2PBcRplusDovetail_9022:HG2_PB_SVrefine2PB10Xhap12_4370:HG2_PB_SVrefine2Falcon2Bionano_2986:HG2_PB_SVrefine2Falcon1plusDovetail_9673:HG2_Ill_scalpel_5894:HG2_Ill_manta_1721:HG2_Ill_SVrefine2DISCOVARplusDovetail_10508:HG2_Ill_GATKHCSBGrefine_4194:HG2_10X_allpass_1002:HG2_10X_SVrefine210Xhap12_4389;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4389:HG2_10X_allpass_1002:HG2_Ill_GATKHCSBGrefine_4194:HG2_Ill_SVrefine2DISCOVARplusDovetail_10508:HG2_Ill_manta_1721:HG2_Ill_scalpel_5894:HG2_PB_SVrefine2Falcon1plusDovetail_9673:HG2_PB_SVrefine2Falcon2Bionano_2986:HG2_PB_SVrefine2PB10Xhap12_4370:HG2_PB_SVrefine2PBcRplusDovetail_9022:HG3_10X_allpass_1234:HG3_Ill_GATKHCSBGrefine_4036:HG3_Ill_SVrefine2DISCOVARDovetail_4520:HG3_Ill_manta_1416:HG3_Ill_scalpel_5987:HG3_PB_SVrefine2Falcon1Dovetail_3750:HG4_10X_allpass_1166:HG4_Ill_GATKHCSBGrefine_4274:HG4_Ill_SVrefine2DISCOVARDovetail_4446:HG4_Ill_manta_1496:HG4_Ill_scalpel_5788:HG4_PB_SVrefine2Falcon1Dovetail_3647:HG4_PB_SVrefine2PBcRDovetail_3008;NumExactMatchSVs=23;ClusterMaxShiftDist=0.099839;ClusterMaxSizeDiff=0.099839;ClusterMaxEditDist=0.099839;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=31030;DistForward=27905;DistMin=27905;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:99759461-99759794;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3202.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:89:1/1:3:55:1:21:./.:0:0:0:0:1/1:0:54:0/1:2:11:.:.:.
chr5	99923533	HG4_10X_allpass_1167	TAAAATGTTATTAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATGGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9023:HG4_Ill_Krunchall_8881:HG3_Ill_Krunchall_8371:HG2_Ill_Krunchall_8561:HG3_PB_assemblyticsfalcon_21647:HG2_PB_assemblyticsfalcon_21718:HG4_PB_assemblyticsfalcon_21192:HG2_PB_assemblyticsPBcR_20975:HG2_PB_pbsv_6012:HG4_PB_pbsv_6040:HG4_Ill_MetaSV_4229:HG2_PB_HySA_11170:HG2_Ill_tnscope_696:HG2_Ill_MetaSV_4059:HG4_PB_SVrefine2PBcRDovetail_3009:HG4_PB_SVrefine2Falcon1Dovetail_3648:HG4_Ill_manta_1499:HG4_Ill_GATKHCSBGrefine_4278:HG4_10X_allpass_1167:HG3_PB_pbsv_5848:HG3_PB_SVrefine2Falcon1Dovetail_3751:HG3_Ill_manta_1419:HG3_Ill_MetaSV_4240:HG3_Ill_GATKHCSBGrefine_4040:HG3_10X_allpass_1235:HG2_PB_SVrefine2PB10Xhap12_4372:HG2_PB_SVrefine2Falcon2Bionano_2987:HG2_PB_SVrefine2Falcon1plusDovetail_9674:HG2_Ill_manta_1724:HG2_Ill_breakscan11_887:HG2_Ill_GATKHCSBGrefine_4198:HG2_10X_allpass_1003:HG2_10X_SVrefine210Xhap12_4391:HG3_Ill_Spiral_6579:HG2_Ill_Spiral_446;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4391:HG2_10X_allpass_1003:HG2_Ill_GATKHCSBGrefine_4198:HG2_Ill_breakscan11_887:HG2_Ill_manta_1724:HG2_PB_SVrefine2Falcon1plusDovetail_9674:HG2_PB_SVrefine2Falcon2Bionano_2987:HG2_PB_SVrefine2PB10Xhap12_4372:HG3_10X_allpass_1235:HG3_Ill_GATKHCSBGrefine_4040:HG3_Ill_MetaSV_4240:HG3_Ill_manta_1419:HG3_PB_SVrefine2Falcon1Dovetail_3751:HG3_PB_pbsv_5848:HG4_10X_allpass_1167:HG4_Ill_GATKHCSBGrefine_4278:HG4_Ill_manta_1499:HG4_PB_SVrefine2Falcon1Dovetail_3648:HG4_PB_SVrefine2PBcRDovetail_3009;NumExactMatchSVs=19;ClusterMaxShiftDist=0.096828;ClusterMaxSizeDiff=0.096828;ClusterMaxEditDist=0.096828;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-305;DistBack=-301;DistForward=-267;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:99923534-99923852;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3203.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:46:0|1:30:0:0:39:./.:0:0:0:0:0/1:50:28:0/1:38:6:.:.:.
chr5	101693848	HG2_Ill_GATKHCSBGrefine_4203	TGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCACAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCTCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGAATTTTGAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGTGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTCTTCATGTCCTTTGCCCACTTTTTGATGGGGTTGTTTTTTTCTTGTAAATTTATTGGCATTCATTGTAGATTCTGGATATTAGCTCTTTGTCAGATGAGTAGGTTGTGAAAATTTTCTCCCATTTTGTGGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCACTTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTTTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTCCATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAGCAGGGAATCCTTTCCCCATTGTTTGTTTTTCTCA	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_21659:HG2_PB_HySA_11185:HG2_PB_assemblyticsfalcon_21733:HG2_Ill_tnscope_697:HG4_PB_pbsv_6047:HG4_Ill_MetaSV_4230:HG4_Ill_GATKHCSBGrefine_4280:HG3_PB_SVrefine2Falcon1Dovetail_3753:HG2_PB_pbsv_6018:HG2_PB_SVrefine2PB10Xhap12_4378:HG2_PB_SVrefine2Falcon2Bionano_2992:HG2_PB_SVrefine2Falcon1plusDovetail_9680:HG2_Ill_MetaSV_4060:HG2_Ill_GATKHCSBGrefine_4203:HG2_10X_SVrefine210Xhap12_4396;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4396:HG2_Ill_GATKHCSBGrefine_4203:HG2_Ill_MetaSV_4060:HG2_PB_SVrefine2Falcon1plusDovetail_9680:HG2_PB_SVrefine2Falcon2Bionano_2992:HG2_PB_SVrefine2PB10Xhap12_4378:HG2_PB_pbsv_6018:HG3_PB_SVrefine2Falcon1Dovetail_3753:HG4_Ill_GATKHCSBGrefine_4280:HG4_Ill_MetaSV_4230:HG4_PB_pbsv_6047;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00542594;ClusterMaxSizeDiff=0.00542594;ClusterMaxEditDist=0.00542594;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-921;DistBack=477;DistForward=-921;DistMin=-921;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=5:101693849-101694772;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:35:0:0:24:./.:0:0:0:0:0/1:46:10:0/1:82:30:.:.:.
chr5	102163354	HG2_Ill_svaba_7724	TTGAAGCTCACTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4061:HG3_PB_HySA_9277:HG4_PB_assemblyticsfalcon_21206:HG3_PB_assemblyticsfalcon_21661:HG2_PB_assemblyticsfalcon_21736:HG2_PB_assemblyticsPBcR_20990:HG4_Ill_Krunchall_8901:HG3_Ill_Krunchall_8389:HG2_Ill_Krunchall_8581:HG4_Ill_Spiral_503:HG3_Ill_Spiral_6597:HG3_PB_pbsv_5853:HG2_PB_pbsv_6019:HG4_PB_HySA_8961:HG2_PB_HySA_11190:HG4_PB_pbsv_6048:HG4_PB_SVrefine2PBcRDovetail_3013:HG4_PB_SVrefine2Falcon1Dovetail_3653:HG4_Ill_svaba_7834:HG4_Ill_scalpel_5801:HG4_Ill_manta_1501:HG4_Ill_SVrefine2DISCOVARDovetail_4451:HG4_Ill_GATKHCSBGrefine_4281:HG4_10X_allpass_1169:HG3_PB_SVrefine2PBcRDovetail_2785:HG3_PB_SVrefine2Falcon1Dovetail_3754:HG3_Ill_svaba_7812:HG3_Ill_scalpel_5998:HG3_Ill_manta_1423:HG3_Ill_SVrefine2DISCOVARDovetail_4529:HG3_Ill_GATKHCSBGrefine_4048:HG3_10X_allpass_1237:HG2_PB_SVrefine2PBcRplusDovetail_9030:HG2_PB_SVrefine2PB10Xhap12_4380:HG2_PB_SVrefine2Falcon2Bionano_2994:HG2_PB_SVrefine2Falcon1plusDovetail_9682:HG2_Ill_svaba_7724:HG2_Ill_scalpel_5906:HG2_Ill_manta_1727:HG2_Ill_breakscan11_888:HG2_Ill_SVrefine2DISCOVARplusDovetail_10515:HG2_Ill_GATKHCSBGrefine_4204:HG2_10X_allpass_1004:HG2_10X_SVrefine210Xhap12_4400:HG4_Ill_MetaSV_4231:HG3_Ill_MetaSV_4242:HG2_Ill_tnscope_698:HG2_Ill_Spiral_447;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4400:HG2_10X_allpass_1004:HG2_Ill_GATKHCSBGrefine_4204:HG2_Ill_SVrefine2DISCOVARplusDovetail_10515:HG2_Ill_breakscan11_888:HG2_Ill_manta_1727:HG2_Ill_scalpel_5906:HG2_Ill_svaba_7724:HG2_PB_SVrefine2Falcon1plusDovetail_9682:HG2_PB_SVrefine2Falcon2Bionano_2994:HG2_PB_SVrefine2PB10Xhap12_4380:HG2_PB_SVrefine2PBcRplusDovetail_9030:HG3_10X_allpass_1237:HG3_Ill_GATKHCSBGrefine_4048:HG3_Ill_SVrefine2DISCOVARDovetail_4529:HG3_Ill_manta_1423:HG3_Ill_scalpel_5998:HG3_Ill_svaba_7812:HG3_PB_SVrefine2Falcon1Dovetail_3754:HG3_PB_SVrefine2PBcRDovetail_2785:HG4_10X_allpass_1169:HG4_Ill_GATKHCSBGrefine_4281:HG4_Ill_SVrefine2DISCOVARDovetail_4451:HG4_Ill_manta_1501:HG4_Ill_scalpel_5801:HG4_Ill_svaba_7834:HG4_PB_SVrefine2Falcon1Dovetail_3653:HG4_PB_SVrefine2PBcRDovetail_3013;NumExactMatchSVs=28;ClusterMaxShiftDist=0.15102;ClusterMaxSizeDiff=0.15102;ClusterMaxEditDist=0.15102;PBcalls=18;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-253;DistBack=-50;DistForward=-235;DistMin=-235;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=5:102163355-102163626;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:./.:0:2:0:2:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr5	103030554	HG2_Ill_manta_1732	TAAGAATCAATTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACCGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_6610:HG3_Ill_Krunchall_8401:HG3_PB_pbsv_5857:HG3_Ill_Krunchall_8400:HG2_PB_pbsv_6022:HG2_Ill_Krunchall_8588:HG4_PB_assemblyticsfalcon_21212:HG3_PB_assemblyticsfalcon_21669:HG2_PB_assemblyticsfalcon_21741:HG3_Ill_MetaSV_4243:HG2_Ill_tnscope_699:HG4_PB_SVrefine2Falcon1Dovetail_3655:HG3_PB_SVrefine2PBcRDovetail_2787:HG3_PB_SVrefine2Falcon1Dovetail_3755:HG3_PB_HySA_9288:HG3_Ill_scalpel_6003:HG3_Ill_manta_1426:HG3_Ill_SVrefine2DISCOVARDovetail_4532:HG3_Ill_GATKHCSBGrefine_4052:HG3_10X_allpass_1238:HG2_PB_SVrefine2Falcon2Bionano_2996:HG2_PB_SVrefine2Falcon1plusDovetail_9683:HG2_Ill_manta_1732:HG2_Ill_MetaSV_4062:HG2_Ill_GATKHCSBGrefine_4209:HG2_10X_SVrefine210Xhap12_4404:HG2_Ill_breakscan11_889;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4404:HG2_Ill_GATKHCSBGrefine_4209:HG2_Ill_MetaSV_4062:HG2_Ill_manta_1732:HG2_PB_SVrefine2Falcon1plusDovetail_9683:HG2_PB_SVrefine2Falcon2Bionano_2996:HG3_10X_allpass_1238:HG3_Ill_GATKHCSBGrefine_4052:HG3_Ill_SVrefine2DISCOVARDovetail_4532:HG3_Ill_manta_1426:HG3_Ill_scalpel_6003:HG3_PB_HySA_9288:HG3_PB_SVrefine2Falcon1Dovetail_3755:HG3_PB_SVrefine2PBcRDovetail_2787:HG4_PB_SVrefine2Falcon1Dovetail_3655;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0780031;ClusterMaxSizeDiff=0.0780031;ClusterMaxEditDist=0.0780031;PBcalls=11;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=14;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-178;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:103030555-103030892;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:37:0|1:22:5:1:24:./.:0:0:0:0:0/1:22:18:0/1:19:6:.:.:.
chr5	103062310	HG3_10X_allpass_1239	GTGTGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4405:HG2_10X_allpass_1005:HG3_Ill_GATKHCSBGrefine_4053:HG2_Ill_GATKHCSBGrefine_4210:HG3_Ill_Spiral_6611:HG2_Ill_Spiral_448:HG4_PB_assemblyticsfalcon_21213:HG2_PB_assemblyticsfalcon_21742:HG3_PB_assemblyticsfalcon_21670:HG3_PB_pbsv_5858:HG2_PB_pbsv_6023:HG3_PB_HySA_9289:HG3_Ill_MetaSV_4244:HG2_Ill_tnscope_700:HG4_PB_SVrefine2Falcon1Dovetail_3656:HG3_PB_SVrefine2PBcRDovetail_2788:HG3_PB_SVrefine2Falcon1Dovetail_3756:HG3_Ill_scalpel_6004:HG3_Ill_manta_1427:HG3_Ill_SVrefine2DISCOVARDovetail_4534:HG3_10X_allpass_1239:HG2_PB_SVrefine2Falcon2Bionano_2997:HG2_PB_SVrefine2Falcon1plusDovetail_9684:HG2_Ill_MetaSV_4063;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4405:HG4_PB_SVrefine2Falcon1Dovetail_3656:HG3_PB_SVrefine2PBcRDovetail_2788:HG3_PB_SVrefine2Falcon1Dovetail_3756:HG3_Ill_scalpel_6004:HG3_Ill_manta_1427:HG3_Ill_SVrefine2DISCOVARDovetail_4534:HG3_10X_allpass_1239:HG2_PB_SVrefine2Falcon2Bionano_2997:HG2_PB_SVrefine2Falcon1plusDovetail_9684:HG2_Ill_MetaSV_4063;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0384615;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=12;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=1484;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=5:103062311-103062632;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3208.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:30:0|1:36:0:0:29:./.:0:0:0:0:0/1:32:15:0/1:44:17:.:.:.
chr5	103854274	HG2_Ill_MetaSV_4066	TAATAAAATTATTAAGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCATGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGATGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAGTAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTCATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTGGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAACCCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTGAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAATAATAATAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_701:HG4_PB_SVrefine2Falcon1Dovetail_3658:HG2_10X_allpass_1006:HG3_10X_allpass_1240:HG4_10X_allpass_1170:HG4_PB_assemblyticsfalcon_21215:HG4_Ill_Krunchall_8913:HG3_Ill_Krunchall_8409:HG2_PB_pbsv_6029:HG2_Ill_Krunchall_8596:HG2_PB_assemblyticsPBcR_21006:HG3_PB_SVrefine2Falcon1Dovetail_3758:HG3_Ill_MetaSV_4246:HG4_PB_pbsv_6053:HG4_PB_SVrefine2PBcRDovetail_3015:HG4_Ill_GATKHCSBGrefine_4286:HG3_PB_pbsv_5864:HG3_PB_SVrefine2PBcRDovetail_2792:HG3_Ill_GATKHCSBGrefine_4055:HG2_PB_SVrefine2PB10Xhap12_4386:HG2_PB_SVrefine2Falcon2Bionano_3000:HG2_Ill_breakscan11_891:HG2_Ill_MetaSV_4066:HG2_Ill_GATKHCSBGrefine_4212:HG2_10X_SVrefine210Xhap12_4410:HG4_Ill_MetaSV_4232;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4410:HG2_Ill_GATKHCSBGrefine_4212:HG2_Ill_MetaSV_4066:HG2_Ill_breakscan11_891:HG2_PB_SVrefine2Falcon2Bionano_3000:HG2_PB_SVrefine2PB10Xhap12_4386:HG3_Ill_GATKHCSBGrefine_4055:HG3_PB_SVrefine2PBcRDovetail_2792:HG3_PB_pbsv_5864:HG4_Ill_GATKHCSBGrefine_4286:HG4_PB_SVrefine2PBcRDovetail_3015:HG4_PB_pbsv_6053;NumExactMatchSVs=12;ClusterMaxShiftDist=0.029395;ClusterMaxSizeDiff=0.029395;ClusterMaxEditDist=0.029395;PBcalls=11;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6052;DistBack=16444;DistForward=-6039;DistMin=-6039;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:103854275-103860340;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3209.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:54:./.:18:7:9:14:./.:0:0:0:0:0/1:50:26:0/1:368:179:5695:.:.
chr5	105086463	HG2_PB_assemblyticsfalcon_21756	AATATATTTATTTATATATAAATAAATATATAAATATATTTATTTATATATAAATAAATAT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_6059:HG3_PB_HySA_9303:HG2_PB_assemblyticsPBcR_21011:HG4_PB_assemblyticsfalcon_21224:HG2_PB_pbsv_6033:HG3_PB_pbsv_5868:HG4_PB_HySA_8981:HG4_Ill_svaba_7850:HG4_Ill_manta_1505:HG4_Ill_Krunchall_8926:HG4_Ill_GATKHC_10171:HG4_Ill_GATKHCSBGrefine_4289:HG4_Ill_250bpfermikitraw_8497:HG4_Ill_150bpfermikitraw_8137:HG3_PB_assemblyticsfalcon_21682:HG3_Ill_svaba_7836:HG3_Ill_manta_1430:HG3_Ill_Krunchall_8420:HG3_Ill_GATKHC_10027:HG3_Ill_GATKHCSBGrefine_4057:HG3_Ill_250bpfermikitraw_8136:HG3_Ill_150bpfermikitraw_7961:HG2_PB_assemblyticsfalcon_21756:HG2_Ill_svaba_7742:HG2_Ill_manta_1734:HG2_Ill_SpiralSDKrefine_13832:HG2_Ill_Krunchall_8611:HG2_Ill_GATKHC_10047:HG2_Ill_GATKHCSBGrefine_4213:HG2_Ill_250bpfermikitraw_8434:HG2_Ill_150bpfermikitraw_7905:HG2_PB_HySA_11220;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7905:HG2_Ill_250bpfermikitraw_8434:HG2_Ill_GATKHCSBGrefine_4213:HG2_Ill_GATKHC_10047:HG2_Ill_Krunchall_8611:HG2_Ill_SpiralSDKrefine_13832:HG2_Ill_manta_1734:HG2_Ill_svaba_7742:HG2_PB_assemblyticsfalcon_21756:HG3_Ill_150bpfermikitraw_7961:HG3_Ill_250bpfermikitraw_8136:HG3_Ill_GATKHCSBGrefine_4057:HG3_Ill_GATKHC_10027:HG3_Ill_Krunchall_8420:HG3_Ill_manta_1430:HG3_Ill_svaba_7836:HG3_PB_assemblyticsfalcon_21682:HG4_Ill_150bpfermikitraw_8137:HG4_Ill_250bpfermikitraw_8497:HG4_Ill_GATKHCSBGrefine_4289:HG4_Ill_GATKHC_10171:HG4_Ill_Krunchall_8926:HG4_Ill_manta_1505:HG4_Ill_svaba_7850:HG4_PB_HySA_8981;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.05;PBcalls=10;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=4581;DistForward=18816;DistMin=4581;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=143;REFWIDENED=5:105086431-105086633;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:66:1/1:3:23:0:10:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr5	106324752	HG2_Ill_SVrefine2DISCOVARplusDovetail_10529	CCACTCTAAATAGAAAGAGCAGAAAGAAATCTATTAAGAGTTATGGGGCACCTGCAGAATTAGTGCAGACATGGAGAGCCCATAGTCTAAACTTCCACAGACAATAACCCAAATGACACCAAAAGCCTGGCCCACCAATGAAGTTGCTATATCTGCTAATATCAGAAAGCAATAGAATCAGAAAGCTACCAGCACACCTATCAGATTTAGAAACATGCCAATGCTGATCAAATTCATCACTTCAAAATAGATGCTCTTTGCCTTGCCTTCTGACACCCATGAAGTTAGGGATCAAATATCAAGGCTTCTATCAAAGGCATAGCAACTCTGCTTGACAGAAGATCTATGTAAACATTTATCTCACAACTACCTTACAACTCTCTCACATGGTGCATTTGTTTCACAGGAGCTAGAGCAAATGCCAAGGATTGCAGTGGTCTCTGGGTAACACTGTTTTTAGCTTTCCAGCCTCTAAATAGAGCCTCTTAAATAGGGTTTACAGTGGTGTTCAGTAAATCAATCTGTCACAAGGAAGCATGAAGGTAAAAATGATGTTTAAGGAATCGTAGTGGATAACAGTAAAAGACAACATATGGCATTAGAATAGAAGCAAGCAAACAAGTGACAGAAACCAAAGGAATATCAGTATTTTAAAAGCAGAAGAGAAGGGAGAGGTGAAAGACTCTGAAATGAATCTAAAGGAATCCAAGCAAAAAAAAAAAAAGTAATTGGTGCTTTGGTTATTAAAAGGAGAGACATTTTAAAAAACTTTTTCAAGTTTTATGCAGCTTGCAGGTCTTAAAAGAATCATTATATTTGTCTATTAGTGTGTCTCTGCTAGAAGAGTGTCATTGGAGATATGAGAGCAGAAACCAGAGAGCAGGGGATTAAAGAGTGAATTGGGAGCAATGAAGTAAAGACAGCTTGATTCCAGAGAGGAGAGAGATAAGGTGACAGGTAGAGGGGAGGAAATAAAATAAGAGACAAGAACTCTCACAAGTGGAGAAAGATTTGAGTTTAGGCTTTTCTATGTGAAAGATGCATACAAGAGAAAAAAACAAAAATACAGTGTAACAATAGAATCATTGAAGAAGCCAGGTCCTGCCAAAATCAGGAAGTGATCAAAACAGAAAGGAGGACACTTCTTATGAAATGAGAAGAAAAAAGGTTCAAATGAATGCAGATTTACCTAGGTTTGGGAAAGGGGGTGGGAAATTAAGGGATTTATTATAACATATTTAATGCTCACTGCTGGAAGACATGGCACAGATATAAGTGGCTTAAGCACAGTGCTCATACTTTAGAACACTCCTAAGTGAAATGGAACGGAGACTCAGAGATATGTAAATATACTGACACAGAGCTCAGCTGCTCCAAAGACTCAGCTAAGGATGTGGGCCATAGATTTCTGGTTGCCCAGTCTACATAATGACATGATTTCTCCCACATTGTGGGTGTCATGAAAGCAGATTGTTAGACTGACTCAAAGTTAAGACTTAGCAGAGTAAATGCACAGATAGTCGAGAGAGACAGACGGAGAGGGAGAGATTGAAGGTGCTGATACAAAAGCTTTTATTATTTTAAAAATTAAACATATAACAGCATTTGTTAAGTGAATGATATGTATTGGAGATGATGCTGAGGAATTAATCTTGTGAAAGGTGTCAGAGTTAAAG	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_8626:HG3_PB_pbsv_5878:HG2_Ill_tnscope_702:HG4_PB_assemblyticsfalcon_21236:HG4_PB_SVrefine2PBcRDovetail_3018:HG4_PB_SVrefine2Falcon1Dovetail_3664:HG3_PB_SVrefine2Falcon1Dovetail_3766:HG2_PB_SVrefine2PBcRplusDovetail_9040:HG2_PB_SVrefine2PB10Xhap12_4392:HG2_PB_SVrefine2Falcon1plusDovetail_9691:HG2_Ill_SVrefine2DISCOVARplusDovetail_10529:HG2_10X_SVrefine210Xhap12_4421:HG4_PB_pbsv_6064:HG2_Ill_SpiralSDKrefine_13841:HG4_Ill_MetaSV_4236:HG2_Ill_MetaSV_4069:HG4_10X_allpass_1171:HG2_10X_allpass_1007:HG4_Ill_Krunchall_8940:HG3_10X_allpass_1241:HG2_PB_pbsv_6041:HG3_PB_assemblyticsfalcon_21694:HG2_PB_assemblyticsfalcon_21768:HG2_PB_assemblyticsPBcR_21018:HG3_Ill_MetaSV_4248:HG3_Ill_Krunchall_8432;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4421:HG2_Ill_SVrefine2DISCOVARplusDovetail_10529:HG2_PB_SVrefine2Falcon1plusDovetail_9691:HG2_PB_SVrefine2PB10Xhap12_4392:HG2_PB_SVrefine2PBcRplusDovetail_9040:HG3_PB_SVrefine2Falcon1Dovetail_3766:HG4_PB_SVrefine2Falcon1Dovetail_3664:HG4_PB_SVrefine2PBcRDovetail_3018:HG4_PB_assemblyticsfalcon_21236;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0641804;ClusterMaxSizeDiff=0.0641804;ClusterMaxEditDist=0.088812;PBcalls=13;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1675;DistBack=-126;DistForward=-1669;DistMin=-1669;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:106324752-106326427;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:0|1:30:0:0:30:./.:0:0:0:0:0/1:45:23:0/1:159:59:1601:.:.
chr5	106892923	HG3_10X_allpass_1242	TGGTACGTGGGAGGTGCTTAGCAAACATTTGTTAAATGAGAAGGGGCGAGAGAGGGAAGCCTGGAGGTCAGGTGGCAGGCATCCTAGCTTGAGTTTCAGCCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4423:HG3_Ill_Krunchall_8435:HG3_PB_pbsv_5882:HG2_PB_pbsv_6046:HG3_Ill_SVrefine2DISCOVARDovetail_4555:HG3_Ill_GATKHCSBGrefine_4095:HG3_10X_allpass_1242:HG2_PB_SVrefine2PB10Xhap12_4396:HG2_Ill_SVrefine2DISCOVARplusDovetail_10533:HG2_Ill_MetaSV_4071:HG2_Ill_GATKHCSBGrefine_4224:HG2_10X_SVrefine210Xhap12_4424:HG3_PB_SVrefine2PBcRDovetail_2799;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4424:HG2_Ill_GATKHCSBGrefine_4224:HG2_Ill_MetaSV_4071:HG2_Ill_SVrefine2DISCOVARplusDovetail_10533:HG2_PB_SVrefine2PB10Xhap12_4396:HG3_10X_allpass_1242:HG3_Ill_GATKHCSBGrefine_4095:HG3_Ill_SVrefine2DISCOVARDovetail_4555;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0199005;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.0298507;PBcalls=4;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-101;DistBack=58248;DistForward=-101;DistMin=-101;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=105;REFWIDENED=5:106892920-106893125;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3213.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:35:0|1:18:4:2:27:./.:0:0:0:0:0/1:22:15:./.:.:.:.:.:.
chr5	107162723	HG2_Ill_SVrefine2DISCOVARplusDovetail_10534	GAGAAAGAAGATGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAGAAAGAAAAGAAAGGAAGGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9696:HG4_PB_pbsv_6069:HG2_PB_pbsv_6050:HG4_Ill_SVrefine2DISCOVARDovetail_4463:HG3_PB_SVrefine2Falcon1Dovetail_3769:HG2_PB_SVrefine2PB10Xhap12_4398:HG2_PB_SVrefine2Falcon2Bionano_3009:HG2_Ill_SVrefine2DISCOVARplusDovetail_10534:HG2_PB_SVrefine2PBcRplusDovetail_9043:HG4_PB_SVrefine2PBcRDovetail_3022;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10534:HG2_PB_SVrefine2Falcon2Bionano_3009:HG2_PB_SVrefine2PB10Xhap12_4398:HG3_PB_SVrefine2Falcon1Dovetail_3769:HG4_Ill_SVrefine2DISCOVARDovetail_4463;NumExactMatchSVs=5;ClusterMaxShiftDist=0.104651;ClusterMaxSizeDiff=0.104651;ClusterMaxEditDist=0.104651;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-174;DistBack=45792;DistForward=-175;DistMin=-175;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=389;REFWIDENED=5:107162717-107163279;PctSeqSimilarity=0.9117;PctSizeSimilarity=0.9206;PctRecOverlap=0.0421;SizeDiff=-15;StartDistance=-167;EndDistance=-182;GTMatch=0;TruScore=62;MatchId=3214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:25:./.:14:5:1:19:./.:0:0:0:0:./.:31:2:./.:.:.:.:.:.
chr5	107183934	HG2_PB_HySA_11237	GAATAAGCAGGTCAGCTCTCACCATTTCTATTCAATATTGTACTGGAGGTCATAGCCAGTGCAATAAAGCAAGTAAAAAAATAGTTATCGATATTAGAAAAAAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4426:HG4_PB_HySA_8998:HG4_PB_pbsv_6070:HG2_PB_pbsv_6051:HG4_PB_SVrefine2PBcRDovetail_3023:HG4_PB_SVrefine2Falcon1Dovetail_3670:HG4_Ill_svaba_7861:HG4_Ill_SVrefine2DISCOVARDovetail_4464:HG4_Ill_GATKHCSBGrefine_4301:HG4_Ill_250bpfermikitraw_8520:HG4_Ill_150bpfermikitraw_8158:HG4_10X_allpass_1172:HG3_PB_SVrefine2Falcon1Dovetail_3770:HG3_Ill_svaba_7850:HG3_Ill_manta_1433:HG3_Ill_SVrefine2DISCOVARDovetail_4558:HG3_Ill_GATKHCSBGrefine_4096:HG3_10X_allpass_1243:HG2_PB_SVrefine2PBcRplusDovetail_9044:HG2_PB_SVrefine2PB10Xhap12_4399:HG2_PB_SVrefine2Falcon2Bionano_3010:HG2_PB_SVrefine2Falcon1plusDovetail_9697:HG2_PB_HySA_11237:HG2_Ill_svaba_7754:HG2_Ill_GATKHCSBGrefine_4226;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4426:HG4_PB_SVrefine2PBcRDovetail_3023:HG4_PB_SVrefine2Falcon1Dovetail_3670:HG4_Ill_svaba_7861:HG4_Ill_SVrefine2DISCOVARDovetail_4464:HG4_Ill_GATKHCSBGrefine_4301:HG4_Ill_250bpfermikitraw_8520:HG4_Ill_150bpfermikitraw_8158:HG4_10X_allpass_1172:HG3_PB_SVrefine2Falcon1Dovetail_3770:HG3_Ill_svaba_7850:HG3_Ill_manta_1433:HG3_Ill_SVrefine2DISCOVARDovetail_4558:HG3_Ill_GATKHCSBGrefine_4096:HG3_10X_allpass_1243:HG2_PB_SVrefine2PBcRplusDovetail_9044:HG2_PB_SVrefine2PB10Xhap12_4399:HG2_PB_SVrefine2Falcon2Bionano_3010:HG2_PB_SVrefine2Falcon1plusDovetail_9697:HG2_PB_HySA_11237:HG2_Ill_svaba_7754:HG2_Ill_GATKHCSBGrefine_4226;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0192308;ClusterMaxSizeDiff=0.0192308;ClusterMaxEditDist=0.0194175;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-103;DistBack=20731;DistForward=-58;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=105;REFWIDENED=5:107183935-107184142;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3215.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:33:./.:17:11:6:13:./.:0:0:0:0:0/1:32:20:./.:.:.:.:.:.
chr5	107198484	HG3_Ill_GATKHCSBGrefine_4097	AGATCAGGACCACTAGGAAAAACCTGAAACAACATCAAACCCTTGCTGTTTGCTTTGAAAGCCTGCTTAGAAGTATGATGATCATGAAATTCAGCTATCTGCACTTTTCTGAAATAGCATGATGTTTTCTAAGTGATCTAGAAAACTATGTTATCTGTTAATTCTTTTTACATTATTGAGAGTTGATATTTCAACATTGTGTTGATGATACTAAATCTTTGCCAGAGCATTTCTCTACTTAAGACTTGCTTGCGTTTAAGTGAACTTTTATTCCAAATTTAACCAAGCCACATAACTAATTCCTTTTGTGATAAAGCTATGATTTATAACGTTTTATTTTCAAAAGCTAAAACAATTTTGAATAAAAAAAGGAAAACTGATACACATATCGGAGTTGAAATATGAACTGATGAATTTAATATAATTTAAATGCGTGCTCTAAGTCTAGAGTTCAGACAGCTTATAACAGTACATTTAGGAGTCATGTATCATCTGGCCTTGCCTATTCCTCTAGCATATTTTTGATACTATCCAGCCACTTGGCCTAGTTTCAGTTTATTAAGTTGTTCAAGTTCCTTCTGGTCTTGGGATCTTTACACATCCCTGGAATACTTTTTGCCCCACTTATCCATTATGACCCCTTTCACATGCCTACTTCCTACTCATCTTTGAGTTCTTAGCTTCAATGTCATTTTCCCAGCAAATTTGGATCACTGCCTTATCTCTGCTCCCCTCACTAAGTTACATAAGTATTCCAGATCATTCACTCTTTCAATACTCCCTACTTTTCCCCCATAGTACTTATTATTGTACTAAGTTTATGATTGCTTAGTTTAAT	A	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4250:HG2_Ill_Krunchall_8632:HG3_10X_allpass_1244:HG2_10X_allpass_1008:HG2_Ill_tnscope_703:HG3_PB_pbsv_5884:HG3_PB_assemblyticsfalcon_21702:HG3_PB_SVrefine2Falcon1Dovetail_3771:HG3_Ill_manta_1434:HG3_Ill_GATKHCSBGrefine_4097:HG2_PB_pbsv_6052:HG2_PB_assemblyticsfalcon_21778:HG2_PB_assemblyticsPBcR_21029:HG2_PB_SVrefine2PBcRplusDovetail_9045:HG2_PB_SVrefine2PB10Xhap12_4400:HG2_PB_SVrefine2Falcon1plusDovetail_9698:HG2_Ill_manta_1738:HG2_Ill_SVrefine2DISCOVARplusDovetail_10535:HG2_Ill_MetaSV_4072:HG2_Ill_GATKHCSBGrefine_4227:HG2_10X_SVrefine210Xhap12_4427;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4427:HG2_Ill_GATKHCSBGrefine_4227:HG2_Ill_MetaSV_4072:HG2_Ill_SVrefine2DISCOVARplusDovetail_10535:HG2_Ill_manta_1738:HG2_PB_SVrefine2Falcon1plusDovetail_9698:HG2_PB_SVrefine2PB10Xhap12_4400:HG2_PB_SVrefine2PBcRplusDovetail_9045:HG2_PB_assemblyticsPBcR_21029:HG2_PB_assemblyticsfalcon_21778:HG2_PB_pbsv_6052:HG3_Ill_GATKHCSBGrefine_4097:HG3_Ill_manta_1434:HG3_PB_SVrefine2Falcon1Dovetail_3771:HG3_PB_assemblyticsfalcon_21702:HG3_PB_pbsv_5884;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00597729;ClusterMaxSizeDiff=0.00597729;ClusterMaxEditDist=0.00597729;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-837;DistBack=-84;DistForward=-837;DistMin=-837;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:107198485-107199322;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:58:1|0:2:40:39:2:./.:0:0:0:0:0/1:50:18:0/1:73:24:.:.:.
chr5	108758405	HG2_Ill_scalpel_5935	AAAATATATATATATATATATATATATGTATATATATATATATATGTATATATATATATATATAT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_892:HG4_PB_pbsv_6082:HG4_PB_HySA_9015:HG2_PB_pbsv_6062:HG2_PB_HySA_11262:HG2_PB_assemblyticsPBcR_21043:HG2_PB_assemblyticsfalcon_21791:HG4_Ill_svaba_7879:HG4_Ill_Krunchall_8963:HG4_Ill_GATKHC_10207:HG4_Ill_GATKHCSBGrefine_4305:HG4_Ill_250bpfermikitraw_8541:HG4_Ill_150bpfermikitraw_8174:HG2_Ill_svaba_7770:HG2_Ill_scalpel_5935:HG2_Ill_Krunchall_8649:HG2_Ill_GATKHC_10088:HG2_Ill_GATKHCSBGrefine_4231:HG2_Ill_150bpfermikitraw_7938:HG2_10X_allpass_1009:HG4_Ill_Spiral_504:HG2_Ill_Spiral_449;NumClusterSVs=22;ExactMatchIDs=HG2_10X_allpass_1009:HG2_Ill_150bpfermikitraw_7938:HG2_Ill_GATKHCSBGrefine_4231:HG2_Ill_GATKHC_10088:HG2_Ill_Krunchall_8649:HG2_Ill_scalpel_5935:HG2_Ill_svaba_7770:HG4_Ill_150bpfermikitraw_8174:HG4_Ill_250bpfermikitraw_8541:HG4_Ill_GATKHCSBGrefine_4305:HG4_Ill_GATKHC_10207:HG4_Ill_Krunchall_8963:HG4_Ill_svaba_7879;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.096;PBcalls=6;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-64;DistBack=49768;DistForward=7810;DistMin=7810;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=5:108758408-108758495;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:34:0|1:20:1:0:30:./.:0:0:0:0:0/1:13:21:./.:.:.:.:.:.
chr5	110694942	HG2_Ill_GATKHCSBGrefine_4232	CTAATAGTAACCATTGTGACTGGTGTGAGATGGTATTTGATTGTGGTTTTGATTTTCGTTTCTCTGATAATCAGTGATGTTAAGCTTTTATTCATATGCTTGTTGGCCACAGGTATGTCTTCTTTTGAAAAGTGTCTGTTCATGTCCTTTGCCCACTTTTTAATGGGTTTTTTTGTTTTTTTCTTATAAATTTGATTACGTTTTTAAGTTCAGGATATTAGACCTTTGCCAGATGCGTACTTTGCAAAAATTTTCTTCCATTCTATAGGTTGTCTGTTTACTCTGTTGAGAGTTTCTTTTGCTGTGCAGAAGCACAGCAAAGA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_6064:HG2_10X_allpass_1010:HG4_Ill_MetaSV_4240:HG3_PB_HySA_9344:HG2_PB_HySA_11273:HG2_Ill_tnscope_704:HG2_Ill_MetaSV_4075:HG4_PB_assemblyticsfalcon_21270:HG4_PB_SVrefine2PBcRDovetail_3032:HG4_PB_SVrefine2Falcon1Dovetail_3677:HG4_Ill_svaba_7893:HG4_Ill_scalpel_5852:HG4_Ill_manta_1513:HG4_Ill_SVrefine2DISCOVARDovetail_4475:HG4_Ill_GATKHCSBGrefine_4307:HG4_10X_allpass_1174:HG3_PB_pbsv_5891:HG3_PB_assemblyticsfalcon_21724:HG3_PB_SVrefine2PBcRDovetail_2805:HG3_PB_SVrefine2Falcon1Dovetail_3775:HG3_Ill_svaba_7869:HG3_Ill_scalpel_6041:HG3_Ill_manta_1435:HG3_Ill_SVrefine2DISCOVARDovetail_4571:HG3_Ill_GATKHCSBGrefine_4101:HG3_10X_allpass_1245:HG2_PB_assemblyticsPBcR_21053:HG2_PB_SVrefine2PBcRplusDovetail_9052:HG2_PB_SVrefine2PB10Xhap12_4411:HG2_PB_SVrefine2Falcon2Bionano_3017:HG2_PB_SVrefine2Falcon1plusDovetail_9707:HG2_Ill_svaba_7784:HG2_Ill_scalpel_5950:HG2_Ill_manta_1742:HG2_Ill_SpiralSDKrefine_13859:HG2_Ill_SVrefine2DISCOVARplusDovetail_10549:HG2_Ill_GATKHCSBGrefine_4232:HG2_10X_SVrefine210Xhap12_4434:HG2_PB_HySA_11272:HG2_PB_assemblyticsfalcon_21799:HG4_Ill_Krunchall_8982:HG3_Ill_Krunchall_8461:HG2_Ill_Krunchall_8665:HG4_PB_pbsv_6085;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4434:HG2_Ill_GATKHCSBGrefine_4232:HG2_Ill_SVrefine2DISCOVARplusDovetail_10549:HG2_Ill_SpiralSDKrefine_13859:HG2_Ill_manta_1742:HG2_Ill_scalpel_5950:HG2_Ill_svaba_7784:HG2_PB_SVrefine2Falcon1plusDovetail_9707:HG2_PB_SVrefine2Falcon2Bionano_3017:HG2_PB_SVrefine2PB10Xhap12_4411:HG2_PB_SVrefine2PBcRplusDovetail_9052:HG2_PB_assemblyticsPBcR_21053:HG3_10X_allpass_1245:HG3_Ill_GATKHCSBGrefine_4101:HG3_Ill_SVrefine2DISCOVARDovetail_4571:HG3_Ill_manta_1435:HG3_Ill_scalpel_6041:HG3_Ill_svaba_7869:HG3_PB_SVrefine2Falcon1Dovetail_3775:HG3_PB_SVrefine2PBcRDovetail_2805:HG3_PB_assemblyticsfalcon_21724:HG3_PB_pbsv_5891:HG4_10X_allpass_1174:HG4_Ill_GATKHCSBGrefine_4307:HG4_Ill_SVrefine2DISCOVARDovetail_4475:HG4_Ill_manta_1513:HG4_Ill_scalpel_5852:HG4_Ill_svaba_7893:HG4_PB_SVrefine2Falcon1Dovetail_3677:HG4_PB_SVrefine2PBcRDovetail_3032:HG4_PB_assemblyticsfalcon_21270;NumExactMatchSVs=31;ClusterMaxShiftDist=0.00927357;ClusterMaxSizeDiff=0.00927357;ClusterMaxEditDist=0.00930233;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=-460;DistForward=70210;DistMin=-460;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:110694943-110695264;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:1/1:0:14:0:16:./.:0:0:0:0:1/1:0:31:./.:2:12:.:.:.
chr5	113459037	HG2_PB_SVrefine2Falcon2Bionano_3021	ACATTTTCTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGTCTCAGCCTCCCGCGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTGTTTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4441:HG2_PB_assemblyticsfalcon_21811:HG3_PB_assemblyticsfalcon_21737:HG2_PB_assemblyticsPBcR_21067:HG3_Ill_Krunchall_8473:HG3_PB_HySA_9354:HG3_Ill_MetaSV_4255:HG2_Ill_tnscope_705:HG2_Ill_MetaSV_4077:HG4_PB_SVrefine2Falcon1Dovetail_3681:HG3_PB_pbsv_5896:HG3_PB_SVrefine2PBcRDovetail_2809:HG3_PB_SVrefine2Falcon1Dovetail_3778:HG3_Ill_scalpel_6055:HG3_Ill_manta_1436:HG3_Ill_SVrefine2DISCOVARDovetail_4581:HG3_Ill_GATKHCSBGrefine_4103:HG3_10X_allpass_1246:HG2_PB_pbsv_6070:HG2_PB_SVrefine2PBcRplusDovetail_9056:HG2_PB_SVrefine2PB10Xhap12_4416:HG2_PB_SVrefine2Falcon2Bionano_3021:HG2_PB_SVrefine2Falcon1plusDovetail_9711:HG2_Ill_scalpel_5957:HG2_Ill_manta_1744:HG2_Ill_breakscan11_893:HG2_Ill_SVrefine2DISCOVARplusDovetail_10559:HG2_Ill_GATKHCSBGrefine_4236:HG2_10X_allpass_1011;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4441:HG4_PB_SVrefine2Falcon1Dovetail_3681:HG3_PB_pbsv_5896:HG3_PB_SVrefine2PBcRDovetail_2809:HG3_PB_SVrefine2Falcon1Dovetail_3778:HG3_Ill_scalpel_6055:HG3_Ill_manta_1436:HG3_Ill_SVrefine2DISCOVARDovetail_4581:HG3_Ill_GATKHCSBGrefine_4103:HG3_10X_allpass_1246:HG2_PB_pbsv_6070:HG2_PB_SVrefine2PBcRplusDovetail_9056:HG2_PB_SVrefine2PB10Xhap12_4416:HG2_PB_SVrefine2Falcon2Bionano_3021:HG2_PB_SVrefine2Falcon1plusDovetail_9711:HG2_Ill_scalpel_5957:HG2_Ill_manta_1744:HG2_Ill_breakscan11_893:HG2_Ill_SVrefine2DISCOVARplusDovetail_10559:HG2_Ill_GATKHCSBGrefine_4236:HG2_10X_allpass_1011;NumExactMatchSVs=21;ClusterMaxShiftDist=0.110935;ClusterMaxSizeDiff=0.110935;ClusterMaxEditDist=0.110935;PBcalls=13;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=76731;DistForward=-297;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=5:113459038-113459378;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3220.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:./.:19:13:8:16:./.:0:0:0:0:0/1:25:28:0/1:22:6:.:.:.
chr5	114325224	HG4_PB_SVrefine2PBcRDovetail_3037	CGAGAGGTGACAATGTGCTAGCAGCCTTTGCTCACTCTCAGTGCCTCCTTGACCTTGGTGTCTCCTCTGGCCATGCTCAAGGAGCCCTTCAGACCACCGCTGCACTGTGGGGGCCCCTCTCTGGGGCTGGCCGAGGCTGGAGTCAGCTCCCTCTGCTCAGGGGGAGGTGTGGAGGGAAAGGTATGGACGGGAGCTGGGGTTGCACGGGCCAGCTCGGGTTCCAGGTGAGTGCAGACCCAGCAAGCCCCATACTCAGCACCGCCAGCCAAAGCCTGCTGGGCTTGATCGGGGGACGAGCTCTCTCTGGGCTGCTGGAGTGCCCAGGCTAGGTGCTGCAAAGTCCCTCCATGAGTACCAGTGAGAGGTGAAGCTGGCTAGGCTTCTGGGATGGGTGGGGACTTGGAGAACTTTTGTGTCTAGCTAAAGGATTATAAACACACCAATCAGCACTCTGTGTCTAGCTAAAGGTTTATAAACGCACCAATCAGTACTCTGTCAAAATGGACCAATCAGCTCTCTGTAAAACTGACCAATCAGCAGGATGTGGGTGGGGCCAGATAAGGGAATAAAAGCAGGCCACCCGAGCTAGCAGTGAAAACCAGCTTGGGTCCCCTTCCACACTGCGGAAGCTTTCTTCTTTCACTCTTTGCAGTAAATCTTGCTGCTGCTCACTCTTTGGGTCCACACCACCTTTATGAGCTGTAACACTCACCATGAAGGTCTGCAGCTTCACTCCTGAAGTCAGCAAGACCACAAACCCACCAGAAGGAAGAAATTCTGGACACATCTGAACATGTGAAGGAACAAACTCCGGATACATCATCTTTAAGAACTATAACACTCACCGTGAGGGTCCGCGGCTTCATTCTTGAAGTCAGCAAGACCAAGAACCCACCAATTCCAGACACATTTTGGTGACCCAGATGGGACTATTGCCTATTGCCAAGCAGTGAGATTATCATCTATCACCAAGCAGTGAGTACAACTGGACCCCTTTCACTTGCTATTCTGTACCATTTTTCCTTAGAATTTGGGGATTAAATATCAGGGACCTGTCGGCCAGTTAAAAGTGACTAGTGTGGCCACACGACTAAAGACATGGGTGTCAGGCTTTCTGGGAAAGGGCTCTCTAACAACCCCTGGCTCTTTGGAGTTGGGAGCGTTGGTTTGCCTGGAACTAGCTTCCGCTTTTCCTGTACTTCCAGGCTGAGCCGAGGGTTGAGAGAGAGGAAAGCCACTCAGCACCAGGGTCTGACAACAAGTTCGTTGACCCTGTGGCCATGAGCGGAACTCTCAAAGGCATGTCGCCCAAGCAAGACTCACCCATCTATCCTATCTATCCTAACCCTTGCTCCCTGGTTCCTAACACCTGCCAGACAAACTTCCTCTCACCTCTCTTCTCCGAGGCTAGTCCTGCTTCTAAAAAACCACTCGCTGTCTCTGGTGCTTTTCTAGTTTCTCCTATAAGAATGATTTCTAGTATAAACTTCAGGACTCTGTTACCTTCTTTTGGCACCTGGGCTCACCAATCAGAAAGACATAATTTTTGCCCAGAGCCCCATCATAGGAGGGACCATCTGGAATTTTAGGATCCCTCCCCAGACTAGAAGGCCCAACAAAAGCTATTCCTGAAGCTAGGATATGAGGAGCCTCAGAAATTGTAGCCTTCCTATTCATATAAATGAGGACAAAAAGTGTCACTCTTCCAACCCTGGAGATCCCTTCCGTCCCTCATGGTATGGCCCTCCACTTCACTTTTGGGGCATAACACCTTTATAGGACATGGATAAACTCTCAATACTAACAGGAGAATGCTTAGGACTCTAACAGTTTTCAAGAATGCGTCAGTAAGGGCCACTAAATCCGATTTTTCTTGGTCCTCCTTGTGGTCTAGGAGGACAGGAAAGGGTGCAGGTTTTCAAGAATGCATTGGTAAGCACCACTAAATCCAATTTTTCTTGGTCCTCTTTGTGGTCTAGGAGGACAGGCAAGGGTGCAGGTTTTTGAGAATGCATCAGTAAGGGCCACTAAATCCAACCTTCCTCGGTCCTCCTTGTAGTCTGGGAGGAAAACTAGTGTTTCTGCTGTTGCGTTTGTGAGCACAACTACTCTGATCAGCAGGGTCCAGGGACTGTTGTGGGTTCTTGGGAAGGGGTTGTTTCTGCTGCTGCATCAGTGAGCACAACTATTCTGAACAGCAGGGTCCAGGGACCGTTGCGGGTTCTTGGGCAGGGGGAGAAACAAAACAAACCAAAACTGTGGCTGGTTTTGTCTTTCAGATGGGAAACACTCAGGCATCAAAAGGCCCACCTGTGAAATGCATCCTAAGCCATTGGACCAATTTGACCCACAAACCCTGAAAAAGAGGCAGCCCTTTTTTTTTTTTTTTTTTTTGAGACGGAATCTCACTCTGTCACCCAGGTTGGAGTGCAGTGGTGCAATCTCCGCTCACTGCCAGCTCCACCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCTGAGCAGCTGGGACTACAGGTGCCCACCACCACACCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCCTGTTAGCCAGGATGGTCTTGATCTCCTGACCTTGTGATCCACCTGCCTCAGCTTTGCAAAGTGCTAGGGTTACAGGTGTAAGCCACCACACCCAGCCAAGGCAGCCCATTTTTTTCTGCACTATGCCCTGGCTCCAATATTCTCTCTGTGATGGGGGAAAATGGCCACCTGAGGGAAGTATAAATTACAATACTATCATGCAGCTTCACCTTTTCTGTAAGAGGGAATGCAAATGGAGTGAAATACCTTATGTCCAAGCTTTCCTTTCATTGAGAGACAATACACAACGATGCAAAGCTTGCAATTTACATCCCACAGGAGGACCTTTCAGCTTACCCCCATATCCTAGCCTCCCTATAGCTCCCCTTCCTATTAATGATAATCCTCCTCTAATCTCCCCCACCCAGAGGGAAATAAGCAAAGAAATCTCCAAAGGACCAAAAAAAACCCTGGGCTATCAGTTATGTCCCCTTCAAGCTATAGGGGGAGGGGAATTTGGCCCAACCTGGGTACATGTCCCCTTCTCCCTCTCTGATTTAATGTAGATCAAGGCAGATCTGGGGAAGTTTTCAGATTATCCTGATAGGTACATAGATGTCCTACAGGGTCTAGGGCAAATCTTTGATATCACTTGGAGAGATGTCATGCTATTGTTAGATCAAACCCTGGCCTTTAAAGAAAAGAATGTGGCTTTAGCTGCAGCCTGAGAGTTTGGAAATACTTGGTATCTTAGTCAAGTAAATGATAGAATGACAGCTGAAGAAAGGGACAAATTCCCTACCTGTCAGCAAGCCGTTCCCAGTATGGATTCCCACTAGGACCTTGACTGAGATCACGGGGACTGGAGTCATAAACATCTGTTGACTGTGTTCTAGAAGGACTAAGGAGAATTAGGAAAAACCCCATGAATTATTCAGTGATGTCCACCATAACTCAGGGAAAGGAAGAAAATCCTTCTTCCTTCCTCAAGTAGCTATGAGAGGCCTTAAGAAAATATATTCCCCTGTCACCCAAATCATTCGACGGTCAATTGATTCTAAAAGATAAGTTTATTACCCAATCAGCCACAGATGTCAGGAGAAAGCTCCAAAAGCAAGCCCTGGGCCCTGAACAAAATATGGAGGCATTATTAAACCTGGCAACCTCAGTATTCTATAATAGGGACCAAGAGGAACAGGCCCAAAAGGAAAAGCAAGATCAGAGAAAGGCCACAGCCTTAGTCATGGCCCTCAGACAAACAAAACTTGGTGGTTCAGAGAGGAAAGAAAATGGAGCAGGCCAATGACCTGGTAGGGCTTGCTATCAGTGTGGTTTACAAGGACACTTTAAAAAGATTGTCCAGTGAGAAACAAGTCTTCCCCTTGTCCATGTCTGCTATGCTGAGGCAATCACTGGAAGGTGCACTGCCCCAGAAGACAAAGGTTCTCTGGGTCAGAAACCCCCAACCAGATGATCCAACAACAGGACTGAGGGTGCCTGGGGCAAGTGTCAGCTCATATCATCACTCTCACTGAGCCCCAGGTATGTTTAACCATTGAGGGCCAGGAAATTGACTTCCTCTTGGACACTAGCATTGCCTTCTCAGTGCTAATCTCCTGTCCTGGATGACTGTCCTCAAGGTCCATTACCATCTGAGGAATCCTGGGACAGCCTGTAACCAGGTATTTCTCCCACCTCCTCAGTTATAATTGGGACTTTGCTCTTTTCACATGCCTTTCTTGTTATGCCTGAAAGTCCCACACCCTTATTAGGGAGGGACATATTAGCCAAAGCTGGAGCTATTATCTACATGAATATGGGGAACAAGTTGCCCATTTGTTGTCCCTCTACTTGAAGAGGGAATCAACCCTGAAGTCTGGGCATTGGAAGGACAATTTGGAAGGACAAAAAATGCCCACCCACTCCAAATCAGGCTAAAAGACCCCACCATTTTTCCTTATCAAAGGAAATATCCCTTAAGGCCTGAAGCTCATAAAGGTTTACAGGATATTGTTAAACATTTAAAAGCTCAAGGCTTAGTAAGGAAATGCAGCAGTCCCTGCAACACCCCAATTCTAGGAGTACAAAAACCGAACCGTCAGTGGAGACTAGTGCAAGATCTTAGACTCATCAATGAGGCAGTAATTCCTCTATATCCAGTCATATCCAACCCCTATACCCTGCTCTCTCAAATACCAGAGGAAGCAGAATGGTTCACTGTTCTGGACCTCAGGAATGTCTTCTTCTGTATTCCCCTGCACTCTGACTCCCAGTTTCTCTTTGCCTTTGAGGATCCCACAGACCACACATCCCAAATTACATGGACGGTCTTGCCCCAAGGGTTTAGGGATAGCCCTCATCTGTTTGGTCAGGCATGGGTGCAAGATCTAGGCCACTCCTCAAGTCCAGGCACTCTGGTCCTTCAGTATGTGGATGACTTGCTTTTGGCTACCAGTTCAGAAGCCTCATGCCAGCAGGCTACTCTAGATCTCTTGAACTTTCTAGCTAATCAAGGGTACAAGTTGTCTAGGTCAAAGGCCCAGCTTTGCCTACAGCAGGTGAAATATCTAGGCCTAATCTTAGCCAGAGGGACCAGGGTCCTCAGAAAGGAATGAGTACAGCCTATACTGGCTTATCCTCACCCTAAGACATTAAAACAGTTGTGGGGGTTCCTTGGAATCACCAGCTCTTGACGACTATGGATCCCCGGATACAGCAAGATAGCCAGGACCTTCTATACTCTATTCAAGGAGACCCAGAGAGCAAATACTCATCTAGTAGAATGGGAGCCAGAGGCAGAAATAGCCTTCAAAACCATAAAGCAGGCCATAGTTCAAGTTCCAGCTTTAAGCCTTCCCACAGGACAAAACTTCTCTTTATACATCACAGAGAGAGCAGGGATAGCACTTGGAGTCTACTCAGATGCGTGGGACAACCACACAACCAGTGGCATACCTAAGTAAGGAAATTAATGTAGTAGCAAAAGGCTGGCCTCACTGTTTATGGGTAGTTGTGGTGGTGGCCGTCTTAGTGTCAGAGGCTATCAAGATAATTCAAGGAAAGGATCTCACTGTCTGGACTACTCATGATGTAAATAGCATACTAGGTGCCAAAGGAAGTTTATGGCTATCAGACAACTGCCTACTTAGATACCAGGCACTACTCCTTGAGGGACTGGTGCTTCAAATACGTACGTGTGTGGTCCTCAACCCTGCCACTTTTCTCCCAGAGGATGGGGAACCATTTGCACATGACTGCCAACAAATTATAGTCCAGACTTATGCCACCTGAGATGATCTCTTAGAAGTCCCCTTACCTATATGCTGACCTTAACCTATATACCGATGGAAGTTCATTTGTGGAGAATGGGATATGAAGGGCAGGTTATGACATAGTTAGTGATGTAACCATACTTGAAAGTAAGCCTCTTCCCCCAGGGACCAGCACCCAGTTAGCAGAACTAGTGGCACTTACCCGAGCCTTAGAACTGGGAAAGGGAAAAAGAATAAATGTGTATACAGATAGCAAGTATGCTTATCTAATCCTACATGCCCATGCTGCAATATGGAAAGAAAGAGAGTTCCTAACCTCTGGGGGAACCCCCATTAAATACCACAGGAAATTATAGAGTTATTGCACACAGTGCAAAAACCCAAGGAGGTGGCAGTCTTACACTGACAAAGCCATCGGAAAGGTGAAGGAGAAAAGGCAGAAGGAAACCATCAGGCAGATGCTGAGGCCAAAATTGCTGCCAGGTGGAACCCCCCATTAGAAATACCTACAGAAGGACCCTTGGTATGGAACAACCCCCTCCAAGAGATTAAGCCCCAGTATTTCCCAACTGAAGCATAGTGGGGACTTTCACGGGGACATAGTTTTCTCCCCTCGGAGTGGTTGGCGATGGAAGAAGGAAAGGTACTTATATCCAAAGCCAGCCAGTGGAAAATACTTAAAACCCTCCCCCAAACTTTTCATATGGGTATTGAAAACACTCATCAAATGGCCAAATCCCTACTTACAGGGCCAAATCTCCTCTGAACCATCCGACAGGCAGTCAAAACCTGTGAGGTGTGCCAAAGGAATAATCCCTTGGTCCATCATAAGGCCCCTTTGGTGGAACAAAGAATAGGTCACTAGCCTGGACAGGACTGGCAGTTAGACTTCACCCATATGCCTAAGTCAAAGGGATTTCAATACTTATTGGTCTGTGTTGATACCTTTACAAATTGGATAGAAACTTTCCCCTGCAAGACAGAGAAGGCTCAGGAAGTAATTAAAGAACTAATTCATGAAATAATTCCTAGATTTGGGCTTCCCCAAACCTTACAGAGCAACAGTGGTCCAGCTTTTAAAGCCACGATAACTCAGGGAATTTCCAGGGAGCTAGGGATACGATATCACCTTCACTGTTCCTGGAGGCCACAATCCTCAGGGAAGGTCGAGAAGGCAAATGAAACACTCAAGAGGCACTTAAGGAAACTAACACAAGAAACTCATCTCCCATGGCCTACTCTTTTGCCCACGGCCTTGTTGAGAATCTGAAATTCACCTCAAAAAATAGGGCTCAGTCCATATGAAATGCTGTATTGACGACCTTTTCTCACAAATGACCACCTACTTGATCAGGAAACGTCCAACCTGGCCAAAGATATAACTCCTTTGGCAAAATATCAACAAAACCTTAAAAATCTACCTGAGGGATCTCACAGAGAAAAGGGAACAGAGTTGTTTCAATGAGGAGATCTAGTGTTGGTCAAATCTCTCCCCTCTACCTCCCCATCTATGGACTCTTTGGGGGAAGGACCATACTAGGTAATCCTCTCTAATCCCACTATAGTTAAGGTGGCAGGAGTGGAATCTTGGATTCTCTACACCCAAGTTAAACTTTGGACATCCCCTGAGGAACCTGCAGGACCTCAGCTCAAGAGTCCCAAGAGCAGCCAGACCAGCCTCAATACACCTGCAAAGTGTTGGAAGAATTGCATCTCCTATTTCAGAAGGAAATCTCCCAGACTAAAAAGGCTCCTATCACTGATCCTGAGGAAAAACCCCTTCCTCCTTAAAAAAGATAAGTGAAAACAGCATAGTAACCATACTGTTTGTGACAGGACTATATACTGTAGCTCCTGCCAGGACAAAAATCCTAATCACATCAACCTTCTTTCTATCTTCCTTCCTTTTGACAGCAACTTACTCCTACCTTTGACTCAGACTCAATAAAATGATCTCGTCTTCCAAAGCACCCTCTTTACCTTCCTATTTGCTCTTTGCCTATGTATCCCTCCTGCTTCTTTGGATACCTCATACAATCACCCCTCCCCTTCCACTAGCTCCTAATTTCCTCTACAAGACTCTCAACCCACTCTCTGTTAAACCAGTCCAATCCTTCCCTGGCAAATGACTGTTGGCTTTGTATCTCTCTATCAACCTCTGATCACGTTGCCACTCCCATTCCTGCAAAAAAACTGGGTTTTTACCAATTTAACCTACCACCCTTATTATGAAGGAAAACACCCTTTCCAACTTCTAAATATGCAATCATTATCCAACTTCCCCATCTCTGATAGGACCAAGAATACCCTAACAGGACGTGCAATCCAACTTTTAAGTTCTTACATTTCCAACCTCACCTATTACACAAGCAATGAAAAGCCCATACATGGCCCTGTAACTACGAATACCATCTTAACGTTCCAAGCCCCTTTATGCATCCAATGCAACCTGTTATCATGCCTTCCCCTGGGGCACCTGCTGCCTCATCAGTGTAATTACACCCTACAACTTCAAGCCCCAACTGATCATAGTAACTTCCGAGTCACACAAACAGCTCCATTCAGATGGCTTGTCCACTTCTCAGGGCCCCCAAAAATTATCACCTCCTCCCTGCTTAACAAACAGTCCAGGTTTTGTAATGGCAAACATACTCCCTGCATGACCATTCACCCCTGGACCCCCTGCAGCAGTGTCCCCACCACTAGTGAATGCCTTCTCATCCCCTCTTTCAATCACTCTCTTGAATGGTTCCTAGTGGATACAAAACTTTTTTTTTCCAATGGGAAAATCAAACACAGGGAGCCACTCAGTTTGCTCCCAACACCCCTTTCCAGCTGCTCACTGGAGTTACCTTGGCAAGTAATCTAGGAGTATGGGAAAATGAATACAACAAATTCACACACTTTTTTAACATACACAACCAGTTCTGTCTACCCAGCCAACATATATTCTTATGTGGAACATTGACCTATATCTGCCTCCCCACTAACTGGACAGGCACCTGCACCTTAGTTTTTCTAAGTCCCAACATTAACATTGCCCCAGGAAATCAGACCTTATCAGTACCCCTCAAAGCTCAAGTCCATCAGCGCAGAGCCATACAAGTAATACCCCTACTTATAGGGTTAGGAATGGCTACTGCTACAGGAACCAGAATAGCCAATTTATCTACTTCATTATCCTACTACCACACACTCTCAAAGGATTTTTCAGACAGTTTGCAAAAAATAATGAAATCTATCCTTACCCTACAATCCCAAATAGACTCTTTAGCAGCAGTGACTCTCCAAAACCTCTGAGGCCTAGACCTCCTCACTGCTGAGAAAGGAGGACTCTGCACCTTCTTAGGGGAAGAGTGTTGTTTTTACACTAACCAGTCAGGGATAGTATGAGATGCCACCCGGAGTTTACAGGAAAAGGCTTCTGAAATCAGACAATGCCTTTCAAACTCTTATACCAACCTCTGGAGTTGGGCAACATGGCTTCTCCCCTTTCTAGGTCCTGTGGCAGCCATCTTGCTGTTACTCGCCTTTGGACCCTGTATTTTTAACCTGCTTGTCAAATTTGTTTCCTCTAGAATTGAGGCCATCAAGCTACAGATAGTCTTACAAATGGAACTCCAAATGACCTCAACTAACAACTTCTACCGAGGACCCCTGGACCAACCCACTGGCTTAAAGAGTTCCCCTCTGGAGGACACTACAACTGCAGGGCCCCTTCTTCACCCCTATCCAGCAGGAAGTAGCTAGAGTGGTCATTGGCCAAATTCCCAAGAGCAGTTGGGTTGTCCTGTTTAGAGGGGGGATT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4445:HG2_PB_pbsv_6074:HG3_PB_assemblyticsfalcon_21739:HG2_PB_assemblyticsfalcon_21818:HG4_10X_allpass_1175:HG2_Ill_Krunchall_8677:HG4_Ill_MetaSV_4241:HG2_Ill_MetaSV_4078:HG2_10X_allpass_1012:HG4_PB_pbsv_6094:HG2_Ill_tnscope_706:HG4_PB_SVrefine2PBcRDovetail_3037:HG3_PB_SVrefine2Falcon1Dovetail_3780:HG2_PB_pbsv_6073:HG2_PB_SVrefine2PBcRplusDovetail_9059:HG2_PB_SVrefine2PB10Xhap12_4421:HG2_PB_SVrefine2Falcon2Bionano_3023:HG2_PB_SVrefine2Falcon1plusDovetail_9713:HG2_Ill_SVrefine2DISCOVARplusDovetail_10563;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4445:HG4_PB_SVrefine2PBcRDovetail_3037:HG3_PB_SVrefine2Falcon1Dovetail_3780:HG2_PB_pbsv_6073:HG2_PB_SVrefine2PBcRplusDovetail_9059:HG2_PB_SVrefine2PB10Xhap12_4421:HG2_PB_SVrefine2Falcon2Bionano_3023:HG2_PB_SVrefine2Falcon1plusDovetail_9713:HG2_Ill_SVrefine2DISCOVARplusDovetail_10563;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0465676;ClusterMaxSizeDiff=0.0465676;ClusterMaxEditDist=0.0465676;PBcalls=11;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-9636;DistBack=2565;DistForward=-9373;DistMin=-9373;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=943;REFWIDENED=5:114325225-114335803;PctSeqSimilarity=0.9323;PctSizeSimilarity=1;PctRecOverlap=0.9863;SizeDiff=0;StartDistance=-132;EndDistance=-132;GTMatch=0;TruScore=97;MatchId=3221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:56:37:./.:33:3:5:12:./.:0:0:0:0:0/0:70:3:0/1:398:179:10012:.:.
chr5	114393663	HG4_Ill_GATKHCSBGrefine_4311	TTTCTAGTTCTTTTAATTGTGATGATAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTTCCTCTACACACTGCTTTGAATGTGTCCCAGAGATTCTAGTATGTTGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTGTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGTGGTTTTGAGTGAGTTTCTTAATCCTGAG	T	20	PASS	ClusterIDs=HG4_PB_HySA_9042:HG4_Ill_Krunchall_8999:HG2_Ill_Krunchall_8678:HG2_PB_assemblyticsPBcR_21073:HG4_Ill_Krunchall_8998:HG4_PB_pbsv_6095:HG4_Ill_svaba_7902:HG4_Ill_manta_1515:HG4_Ill_MetaSV_4242:HG4_Ill_GATKHCSBGrefine_4311:HG2_PB_pbsv_6075:HG2_PB_SVrefine2PBcRplusDovetail_9060:HG2_PB_SVrefine2Falcon2Bionano_3024:HG2_Ill_svaba_7793:HG2_Ill_manta_1745:HG2_Ill_MetaSV_4079:HG2_Ill_GATKHCSBGrefine_4241:HG2_10X_allpass_1013;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_1013:HG2_Ill_GATKHCSBGrefine_4241:HG2_Ill_MetaSV_4079:HG2_Ill_manta_1745:HG2_Ill_svaba_7793:HG2_PB_SVrefine2Falcon2Bionano_3024:HG2_PB_SVrefine2PBcRplusDovetail_9060:HG2_PB_assemblyticsPBcR_21073:HG4_PB_pbsv_6095:HG4_Ill_svaba_7902:HG4_Ill_manta_1515:HG4_Ill_MetaSV_4242:HG4_Ill_GATKHCSBGrefine_4311:HG2_PB_pbsv_6075;NumExactMatchSVs=14;ClusterMaxShiftDist=0.025878;ClusterMaxSizeDiff=0.025878;ClusterMaxEditDist=0.025878;PBcalls=6;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-267;DistBack=38065;DistForward=-254;DistMin=-254;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=5:114393664-114393937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:31:0|1:33:0:1:24:./.:0:0:0:0:0/1:57:17:./.:.:.:.:.:.
chr5	114731312	HG3_PB_pbsv_5900	GCTCTACAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_894:HG4_Ill_Krunchall_9002:HG3_Ill_Krunchall_8483:HG2_Ill_Krunchall_8680:HG3_PB_HySA_9363:HG4_PB_pbsv_6097:HG2_PB_pbsv_6077:HG4_Ill_MetaSV_4244:HG3_Ill_MetaSV_4257:HG2_Ill_tnscope_707:HG2_Ill_MetaSV_4082:HG4_PB_SVrefine2PBcRDovetail_3039:HG4_PB_SVrefine2Falcon1Dovetail_3684:HG4_PB_HySA_9046:HG4_Ill_svaba_7903:HG4_Ill_scalpel_5864:HG4_Ill_manta_1517:HG4_Ill_SVrefine2DISCOVARDovetail_4490:HG4_Ill_GATKHCSBGrefine_4313:HG4_10X_allpass_1176:HG3_PB_pbsv_5900:HG3_PB_SVrefine2PBcRDovetail_2812:HG3_PB_SVrefine2Falcon1Dovetail_3782:HG3_Ill_svaba_7886:HG3_Ill_scalpel_6059:HG3_Ill_manta_1439:HG3_Ill_SVrefine2DISCOVARDovetail_4586:HG3_Ill_GATKHCSBGrefine_4108:HG3_10X_allpass_1247:HG2_PB_SVrefine2PBcRplusDovetail_9062:HG2_PB_SVrefine2PB10Xhap12_4424:HG2_PB_SVrefine2Falcon2Bionano_3026:HG2_PB_SVrefine2Falcon1plusDovetail_9715:HG2_PB_HySA_11296:HG2_Ill_svaba_7794:HG2_Ill_scalpel_5960:HG2_Ill_manta_1747:HG2_Ill_SVrefine2DISCOVARplusDovetail_10565:HG2_Ill_GATKHCSBGrefine_4243:HG2_10X_allpass_1014:HG2_10X_SVrefine210Xhap12_4447;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4447:HG2_10X_allpass_1014:HG2_Ill_GATKHCSBGrefine_4243:HG2_Ill_SVrefine2DISCOVARplusDovetail_10565:HG2_Ill_manta_1747:HG2_Ill_scalpel_5960:HG2_Ill_svaba_7794:HG2_PB_HySA_11296:HG2_PB_SVrefine2Falcon1plusDovetail_9715:HG2_PB_SVrefine2Falcon2Bionano_3026:HG2_PB_SVrefine2PB10Xhap12_4424:HG2_PB_SVrefine2PBcRplusDovetail_9062:HG3_10X_allpass_1247:HG3_Ill_GATKHCSBGrefine_4108:HG3_Ill_SVrefine2DISCOVARDovetail_4586:HG3_Ill_manta_1439:HG3_Ill_scalpel_6059:HG3_Ill_svaba_7886:HG3_PB_SVrefine2Falcon1Dovetail_3782:HG3_PB_SVrefine2PBcRDovetail_2812:HG3_PB_pbsv_5900:HG4_10X_allpass_1176:HG4_Ill_GATKHCSBGrefine_4313:HG4_Ill_SVrefine2DISCOVARDovetail_4490:HG4_Ill_manta_1517:HG4_Ill_scalpel_5864:HG4_Ill_svaba_7903:HG4_PB_HySA_9046:HG4_PB_SVrefine2Falcon1Dovetail_3684:HG4_PB_SVrefine2PBcRDovetail_3039;NumExactMatchSVs=30;ClusterMaxShiftDist=0.00941915;ClusterMaxSizeDiff=0.00941915;ClusterMaxEditDist=0.00944882;PBcalls=14;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-8511;DistForward=-305;DistMin=-8511;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:114731313-114731644;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:1:5:1:23:./.:0:0:0:0:1/1:0:34:0/1:3:10:.:.:.
chr5	114756498	HG2_PB_SVrefine2Falcon2Bionano_3028	TCTATCTCTTGTTTTCTTTTTTTTTTTTTTTTTTTACATATAGATATATTTTAATCTGTTTATAAAGTAGATATCTTTAACTGAATTGTACATGATCACTTTCCTTCCCTTTACACTAATATAGTTTCAGTACAGACGTTCATGCGTTCAGAACTGAAACTCTTAGAAAAGATGAGATAGAGAAAGGCCACTCACCCTTCACAGCTATAAAGAATCACTAATGCCTGGCTCCTACCATGAACTTAGAGAGGGCCCCTCATTAACCACGAACCAACAGAATCATAACCATAGAGAAGATTGTCCCCTCTCTTTTATGCATCATAAGTCCATCTCCTGCATTACAAGAACACTGGGCAAGCTGTTGAGGTGACTTCTTAAGACATAAAGGAAATAATTTAAAGATTCATTACATGCAAATCCTTTTTTCACTTCAGCTTCTTAAAGCAGACATGTGCATAACTACCTTTGTAATGTTGCTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTCTTTTTTAATTATTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCACTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGTGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATACAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAA	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_4246:HG4_PB_assemblyticsfalcon_21286:HG3_PB_assemblyticsfalcon_21743:HG2_PB_assemblyticsPBcR_21076:HG4_Ill_Krunchall_9005:HG3_Ill_Krunchall_8486:HG2_Ill_breakscan11_895:HG4_PB_pbsv_6099:HG2_Ill_tnscope_708:HG4_PB_SVrefine2Falcon1Dovetail_3686:HG4_Ill_GATKHCSBGrefine_4315:HG4_10X_allpass_1177:HG3_PB_pbsv_5902:HG3_PB_SVrefine2PBcRDovetail_2814:HG3_PB_SVrefine2Falcon1Dovetail_3784:HG3_Ill_MetaSV_4259:HG3_Ill_GATKHCSBGrefine_4109:HG3_10X_allpass_1248:HG2_PB_pbsv_6079:HG2_PB_SVrefine2PBcRplusDovetail_9064:HG2_PB_SVrefine2PB10Xhap12_4426:HG2_PB_SVrefine2Falcon2Bionano_3028:HG2_PB_SVrefine2Falcon1plusDovetail_9717:HG2_Ill_SVrefine2DISCOVARplusDovetail_10566:HG2_Ill_MetaSV_4084:HG2_Ill_GATKHCSBGrefine_4245:HG2_10X_allpass_1015:HG2_10X_SVrefine210Xhap12_4449;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4449:HG2_10X_allpass_1015:HG2_Ill_GATKHCSBGrefine_4245:HG2_Ill_MetaSV_4084:HG2_Ill_SVrefine2DISCOVARplusDovetail_10566:HG2_PB_SVrefine2Falcon1plusDovetail_9717:HG2_PB_SVrefine2Falcon2Bionano_3028:HG2_PB_SVrefine2PB10Xhap12_4426:HG2_PB_SVrefine2PBcRplusDovetail_9064:HG2_PB_pbsv_6079:HG3_10X_allpass_1248:HG3_Ill_GATKHCSBGrefine_4109:HG3_Ill_MetaSV_4259:HG3_PB_SVrefine2Falcon1Dovetail_3784:HG3_PB_SVrefine2PBcRDovetail_2814:HG3_PB_pbsv_5902:HG4_10X_allpass_1177:HG4_Ill_GATKHCSBGrefine_4315:HG4_PB_SVrefine2Falcon1Dovetail_3686;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0860742;ClusterMaxSizeDiff=0.0860742;ClusterMaxEditDist=0.0860742;PBcalls=13;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1391;DistBack=16775;DistForward=-1380;DistMin=-1380;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:114756499-114757906;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3224.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:0|1:36:0:0:26:./.:0:0:0:0:0/1:35:18:0/1:103:49:2486:.:.
chr5	114969336	HG3_PB_SVrefine2PBcRDovetail_2815	ATATCCCTGATATTTAAGAGAAAGCCAAATAGACACATCAATGCATTATTTTTCACAGTTCCTTAATCTGTTTGAGGAGATGAACACAAAGATATACACAAAGGACACATTTTCAGACCTTTGTGAATTCCCAAATCTATGAGTACTTCTACAGCATATGATTTTTCTTTTTTTTTCTTTCTTTTTTTGAGATGCAGTCTTGCTCTGTCGCCCAGGCTGGAGTACAGTAGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCTATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACTACACCTGGCTAATTTTTGTATTTTTAGTAAAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCATGATCCGCCCACCTCGGCCTCCCAAAGTTAGCAATTTTGGGAATTACAGGCATGAGCCACTGTGCCCAGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4452:HG2_PB_HySA_11303:HG2_PB_HySA_11302:HG3_PB_HySA_9367:HG4_PB_pbsv_6101:HG2_PB_pbsv_6081:HG3_PB_pbsv_5904:HG4_Ill_MetaSV_4247:HG3_Ill_MetaSV_4260:HG2_Ill_MetaSV_4085:HG4_PB_SVrefine2PBcRDovetail_3041:HG4_PB_SVrefine2Falcon1Dovetail_3687:HG4_Ill_manta_1518:HG4_Ill_SVrefine2DISCOVARDovetail_4493:HG4_Ill_GATKHCSBGrefine_4316:HG4_10X_allpass_1178:HG3_PB_SVrefine2PBcRDovetail_2815:HG3_PB_SVrefine2Falcon1Dovetail_3786:HG3_Ill_SVrefine2DISCOVARDovetail_4589:HG3_Ill_GATKHCSBGrefine_4110:HG3_10X_allpass_1249:HG2_PB_SVrefine2PBcRplusDovetail_9066:HG2_PB_SVrefine2PB10Xhap12_4429:HG2_PB_SVrefine2Falcon2Bionano_3031:HG2_PB_SVrefine2Falcon1plusDovetail_9720:HG2_Ill_manta_1748:HG2_Ill_SpiralSDKrefine_13872:HG2_Ill_SVrefine2DISCOVARplusDovetail_10568:HG2_Ill_GATKHCSBGrefine_4247;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4452:HG4_PB_SVrefine2PBcRDovetail_3041:HG4_PB_SVrefine2Falcon1Dovetail_3687:HG4_Ill_manta_1518:HG4_Ill_SVrefine2DISCOVARDovetail_4493:HG4_Ill_GATKHCSBGrefine_4316:HG4_10X_allpass_1178:HG3_PB_SVrefine2PBcRDovetail_2815:HG3_PB_SVrefine2Falcon1Dovetail_3786:HG3_Ill_SVrefine2DISCOVARDovetail_4589:HG3_Ill_GATKHCSBGrefine_4110:HG3_10X_allpass_1249:HG2_PB_SVrefine2PBcRplusDovetail_9066:HG2_PB_SVrefine2PB10Xhap12_4429:HG2_PB_SVrefine2Falcon2Bionano_3031:HG2_PB_SVrefine2Falcon1plusDovetail_9720:HG2_Ill_manta_1748:HG2_Ill_SpiralSDKrefine_13872:HG2_Ill_SVrefine2DISCOVARplusDovetail_10568:HG2_Ill_GATKHCSBGrefine_4247;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00629591;ClusterMaxSizeDiff=0.00629591;ClusterMaxEditDist=0.0105152;PBcalls=14;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-475;DistBack=1071;DistForward=-343;DistMin=-343;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=167;REFWIDENED=5:114969337-114969978;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:1:8:0:13:./.:0:0:0:0:1/1:0:43:0/1:3:10:.:.:.
chr5	114990577	HG2_Ill_svaba_7798	GTAATATTCTCCCCTGCCCTTAAGAAGGTATTTTGTAATATTCTCCATGCCCTTAAGAATGTACTTTGTACGCC	G	20	PASS	ClusterIDs=HG2_PB_pbsv_6082:HG2_PB_HySA_11304:HG2_PB_assemblyticsfalcon_21826:HG4_PB_assemblyticsfalcon_21291:HG4_Ill_svaba_7907:HG4_Ill_scalpel_5868:HG4_Ill_manta_1519:HG4_Ill_Krunchall_9007:HG4_Ill_GATKHC_10246:HG4_Ill_GATKHCSBGrefine_4317:HG4_Ill_250bpfermikitraw_8580:HG4_Ill_150bpfermikitraw_8211:HG3_PB_assemblyticsfalcon_21749:HG3_Ill_svaba_7890:HG3_Ill_scalpel_6064:HG3_Ill_manta_1440:HG3_Ill_Krunchall_8489:HG3_Ill_GATKHC_10106:HG3_Ill_GATKHCSBGrefine_4111:HG3_Ill_250bpfermikitraw_8211:HG3_Ill_150bpfermikitraw_8028:HG3_10X_allpass_1250:HG2_PB_assemblyticsPBcR_21080:HG2_Ill_svaba_7798:HG2_Ill_scalpel_5965:HG2_Ill_manta_1749:HG2_Ill_Krunchall_8686:HG2_Ill_GATKHC_10131:HG2_Ill_GATKHCSBGrefine_4248:HG2_Ill_250bpfermikitraw_8504:HG2_Ill_150bpfermikitraw_7977:HG4_PB_pbsv_6102:HG3_PB_pbsv_5905;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_7977:HG2_Ill_250bpfermikitraw_8504:HG2_Ill_GATKHCSBGrefine_4248:HG2_Ill_GATKHC_10131:HG2_Ill_Krunchall_8686:HG2_Ill_manta_1749:HG2_Ill_scalpel_5965:HG2_Ill_svaba_7798:HG2_PB_assemblyticsPBcR_21080:HG3_10X_allpass_1250:HG3_Ill_150bpfermikitraw_8028:HG3_Ill_250bpfermikitraw_8211:HG3_Ill_GATKHCSBGrefine_4111:HG3_Ill_GATKHC_10106:HG3_Ill_Krunchall_8489:HG3_Ill_manta_1440:HG3_Ill_scalpel_6064:HG3_Ill_svaba_7890:HG3_PB_assemblyticsfalcon_21749:HG4_Ill_150bpfermikitraw_8211:HG4_Ill_250bpfermikitraw_8580:HG4_Ill_GATKHCSBGrefine_4317:HG4_Ill_GATKHC_10246:HG4_Ill_Krunchall_9007:HG4_Ill_manta_1519:HG4_Ill_scalpel_5868:HG4_Ill_svaba_7907:HG4_PB_assemblyticsfalcon_21291;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0979021;ClusterMaxSizeDiff=0.0979021;ClusterMaxEditDist=0.153846;PBcalls=8;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-73;DistBack=-77;DistForward=18374;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=56;REFWIDENED=5:114990524-114990652;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3226.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:1:13:1:13:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr5	115130457	HG2_PB_SVrefine2Falcon2Bionano_3032	CAGATTAAGTGTAAGAAACCACTAGGGGATTGTCTAAAAATGCAGTTTCCTGGACTCACCTCCAGAGAGTCCAAGTCTGTGGGTCTAGGATGATCCCTCTAAGTTATTTCTCTCTGTTCAAGAACAATGTGTTATCACCCTAGCAGGAAACCCCTTGGGCTGGGCAGCCACAATCAGCAAATAAGGGAGAGAGACATCCTCCTAGATTGGGCAGTGGTGGTTATGTGCAGGCACAGTAGTCACCTGTTAACAGGAAAGGGTGAGGCACCTGCTTCTTGGTGGGAGCAGACAAAGTTCCTCCTTTGGCCAGAGGTTGAGGTACTGAAAGGATTCATGACTCCCATTAATTA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4453:HG2_PB_PB10Xdip_22936:HG2_PB_pbsv_6083:HG4_Ill_Krunchall_9008:HG2_Ill_Krunchall_8688:HG4_PB_assemblyticsfalcon_21293:HG2_PB_assemblyticsPBcR_21083:HG4_PB_pbsv_6103:HG4_PB_HySA_9051:HG2_PB_SVrefine2PB10Xhap12_4431:HG4_Ill_MetaSV_4248:HG2_Ill_tnscope_709:HG4_PB_SVrefine2PBcRDovetail_3042:HG4_PB_SVrefine2Falcon1Dovetail_3688:HG4_Ill_scalpel_5870:HG4_Ill_manta_1520:HG4_Ill_SVrefine2DISCOVARDovetail_4494:HG4_Ill_GATKHCSBGrefine_4318:HG4_10X_allpass_1179:HG3_PB_assemblyticsfalcon_21751:HG3_PB_SVrefine2Falcon1Dovetail_3787:HG2_PB_assemblyticsfalcon_21828:HG2_PB_SVrefine2PBcRplusDovetail_9067:HG2_PB_SVrefine2PB10Xhap12_4430:HG2_PB_SVrefine2Falcon2Bionano_3032:HG2_PB_SVrefine2Falcon1plusDovetail_9721:HG2_Ill_manta_1750:HG2_Ill_breakscan11_896:HG2_Ill_SpiralSDKrefine_13873:HG2_Ill_SVrefine2DISCOVARplusDovetail_10569:HG2_Ill_MetaSV_4086:HG2_Ill_GATKHCSBGrefine_4249:HG2_10X_allpass_1017;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4453:HG4_PB_SVrefine2PBcRDovetail_3042:HG4_PB_SVrefine2Falcon1Dovetail_3688:HG4_Ill_scalpel_5870:HG4_Ill_manta_1520:HG4_Ill_SVrefine2DISCOVARDovetail_4494:HG4_Ill_GATKHCSBGrefine_4318:HG4_10X_allpass_1179:HG3_PB_assemblyticsfalcon_21751:HG3_PB_SVrefine2Falcon1Dovetail_3787:HG2_PB_assemblyticsfalcon_21828:HG2_PB_SVrefine2PBcRplusDovetail_9067:HG2_PB_SVrefine2PB10Xhap12_4430:HG2_PB_SVrefine2Falcon2Bionano_3032:HG2_PB_SVrefine2Falcon1plusDovetail_9721:HG2_Ill_manta_1750:HG2_Ill_breakscan11_896:HG2_Ill_SpiralSDKrefine_13873:HG2_Ill_SVrefine2DISCOVARplusDovetail_10569:HG2_Ill_MetaSV_4086:HG2_Ill_GATKHCSBGrefine_4249:HG2_10X_allpass_1017;NumExactMatchSVs=22;ClusterMaxShiftDist=0.153409;ClusterMaxSizeDiff=0.153409;ClusterMaxEditDist=0.153409;PBcalls=16;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-349;DistBack=4045;DistForward=73810;DistMin=4045;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=5:115130458-115130816;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:19:0|1:29:0:3:18:./.:0:0:0:0:0/1:56:24:0/1:28:8:.:.:.
chr5	115465267	HG2_PB_SVrefine2PBcRplusDovetail_9069	ATATATACTATATACTAATGTAATATACATTAGTATATATATACTATATACTAATGTAATATACATTAGTATATATATACTATATACTAATGTAATATACATTAGTATATATATACTATATACTATGTAATATACATTAGTGTATATATATACTATATACTATGTGATATACAGTATATATATATACTATATACTATATAATATACATTAGTATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4457:HG2_PB_assemblyticsfalcon_21831:HG4_PB_SVrefine2PBcRDovetail_3043:HG2_PB_SVrefine2Falcon1plusDovetail_9723:HG4_PB_assemblyticsfalcon_21297:HG2_PB_assemblyticsPBcR_21086:HG4_PB_SVrefine2Falcon1Dovetail_3689:HG2_PB_SVrefine2PBcRplusDovetail_9069:HG2_PB_SVrefine2PB10Xhap12_4433:HG2_10X_SVrefine210Xhap12_4458:HG4_Ill_GATKHCSBGrefine_4319:HG2_Ill_GATKHCSBGrefine_4250:HG2_PB_pbsv_6084:HG4_PB_pbsv_6104:HG2_PB_HySA_11309;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4433:HG2_PB_SVrefine2PBcRplusDovetail_9069:HG4_PB_SVrefine2Falcon1Dovetail_3689;NumExactMatchSVs=3;ClusterMaxShiftDist=0.274157;ClusterMaxSizeDiff=0.274157;ClusterMaxEditDist=0.292135;PBcalls=11;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-214;DistBack=91;DistForward=-199;DistMin=-199;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=225;REFWIDENED=5:115465042-115465480;PctSeqSimilarity=0.9459;PctSizeSimilarity=0.9817;PctRecOverlap=0.4886;SizeDiff=-4;StartDistance=112;EndDistance=108;GTMatch=0;TruScore=80;MatchId=3228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:40:0|1:32:2:1:33:./.:0:0:0:0:./.:42:4:./.:.:.:.:.:.
chr5	115894136	HG3_PB_SVrefine2PBcRDovetail_2816	TAAGGATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_6676:HG4_PB_HySA_9058:HG4_PB_assemblyticsfalcon_21305:HG2_PB_assemblyticsPBcR_21090:HG3_PB_assemblyticsfalcon_21761:HG2_PB_assemblyticsfalcon_21833:HG4_Ill_Krunchall_9014:HG3_Ill_Krunchall_8495:HG2_Ill_Krunchall_8693:HG2_Ill_Spiral_451:HG4_PB_pbsv_6108:HG4_Ill_MetaSV_4249:HG3_PB_HySA_9379:HG3_Ill_MetaSV_4262:HG2_PB_HySA_11316:HG2_Ill_tnscope_710:HG2_Ill_MetaSV_4089:HG4_PB_SVrefine2PBcRDovetail_3045:HG4_PB_SVrefine2Falcon1Dovetail_3693:HG4_Ill_manta_1521:HG4_Ill_SVrefine2DISCOVARDovetail_4499:HG4_Ill_GATKHCSBGrefine_4321:HG4_10X_allpass_1180:HG3_PB_pbsv_5908:HG3_PB_SVrefine2PBcRDovetail_2816:HG3_PB_SVrefine2Falcon1Dovetail_3790:HG3_Ill_scalpel_6069:HG3_Ill_manta_1442:HG3_Ill_SVrefine2DISCOVARDovetail_4591:HG3_Ill_GATKHCSBGrefine_4112:HG3_10X_allpass_1251:HG2_PB_pbsv_6086:HG2_PB_SVrefine2PBcRplusDovetail_9071:HG2_PB_SVrefine2PB10Xhap12_4435:HG2_PB_SVrefine2Falcon2Bionano_3034:HG2_PB_SVrefine2Falcon1plusDovetail_9724:HG2_Ill_scalpel_5970:HG2_Ill_manta_1751:HG2_Ill_SpiralSDKrefine_13876:HG2_Ill_SVrefine2DISCOVARplusDovetail_10573:HG2_Ill_GATKHCSBGrefine_4251:HG2_10X_allpass_1018:HG2_10X_SVrefine210Xhap12_4460:HG2_Ill_breakscan11_897:HG4_Ill_Spiral_506;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4460:HG2_10X_allpass_1018:HG2_Ill_GATKHCSBGrefine_4251:HG2_Ill_SVrefine2DISCOVARplusDovetail_10573:HG2_Ill_SpiralSDKrefine_13876:HG2_Ill_manta_1751:HG2_Ill_scalpel_5970:HG2_PB_SVrefine2Falcon1plusDovetail_9724:HG2_PB_SVrefine2Falcon2Bionano_3034:HG2_PB_SVrefine2PB10Xhap12_4435:HG2_PB_SVrefine2PBcRplusDovetail_9071:HG2_PB_pbsv_6086:HG3_10X_allpass_1251:HG3_Ill_GATKHCSBGrefine_4112:HG3_Ill_SVrefine2DISCOVARDovetail_4591:HG3_Ill_manta_1442:HG3_Ill_scalpel_6069:HG3_PB_SVrefine2Falcon1Dovetail_3790:HG3_PB_SVrefine2PBcRDovetail_2816:HG3_PB_pbsv_5908:HG4_10X_allpass_1180:HG4_Ill_GATKHCSBGrefine_4321:HG4_Ill_SVrefine2DISCOVARDovetail_4499:HG4_Ill_manta_1521:HG4_PB_SVrefine2Falcon1Dovetail_3693:HG4_PB_SVrefine2PBcRDovetail_3045;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0726698;ClusterMaxSizeDiff=0.0726698;ClusterMaxEditDist=0.0726698;PBcalls=18;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-864;DistForward=20755;DistMin=-864;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=5:115894137-115894469;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:80:1/1:0:33:1:32:./.:0:0:0:0:1/1:0:42:0/1:2:9:.:.:.
chr5	116273303	HG4_Ill_manta_1522	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGAGATGGAGTCTTACTCTGATGCCCAGGCTGGAGTGCAGTGGCATGATC	A	20	PASS	ClusterIDs=HG2_Ill_svaba_7807:HG2_Ill_SpiralSDKrefine_13882:HG4_PB_assemblyticsfalcon_21311:HG4_Ill_GATKHC_10260:HG4_Ill_GATKHCSBGrefine_4324:HG2_Ill_GATKHC_10147:HG2_Ill_GATKHCSBGrefine_4253:HG2_PB_PB10Xdip_22938:HG4_Ill_Spiral_507:HG2_Ill_Spiral_452:HG4_Ill_scalpel_5876:HG4_Ill_manta_1522:HG4_Ill_Krunchall_9019:HG2_Ill_scalpel_5977:HG2_Ill_Krunchall_8699:HG4_PB_pbsv_6112:HG2_PB_pbsv_6088:HG4_Ill_250bpfermikitraw_8592:HG4_Ill_150bpfermikitraw_8222:HG2_Ill_250bpfermikitraw_8516:HG2_Ill_150bpfermikitraw_7989:HG4_Ill_svaba_7916;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_Krunchall_8699:HG2_Ill_scalpel_5977:HG2_PB_PB10Xdip_22938:HG4_Ill_scalpel_5876:HG4_Ill_manta_1522:HG4_Ill_Krunchall_9019;NumExactMatchSVs=6;ClusterMaxShiftDist=0.238095;ClusterMaxSizeDiff=0.238095;ClusterMaxEditDist=0.238095;PBcalls=4;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-85;DistBack=15103;DistForward=-85;DistMin=-85;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:116273304-116273390;PctSeqSimilarity=0.9615;PctSizeSimilarity=0.9529;PctRecOverlap=0.9535;SizeDiff=4;StartDistance=-1;EndDistance=3;GTMatch=0;TruScore=95;MatchId=3230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:41:0|1:24:5:7:29:./.:0:0:0:0:0/1:14:27:./.:.:.:.:.:.
chr5	116428182	HG4_PB_SVrefine2Falcon1Dovetail_3696	ACATACTCCAATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTGAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_6090:HG2_10X_allpass_1019:HG2_Ill_Krunchall_8704:HG3_PB_HySA_9390:HG2_Ill_tnscope_711:HG2_Ill_MetaSV_4090:HG4_PB_assemblyticsfalcon_21317:HG4_PB_SVrefine2Falcon1Dovetail_3696:HG3_PB_pbsv_5913:HG3_PB_SVrefine2PBcRDovetail_2818:HG3_PB_SVrefine2Falcon1Dovetail_3791:HG3_Ill_scalpel_6079:HG3_Ill_manta_1446:HG3_Ill_SVrefine2DISCOVARDovetail_4596:HG3_Ill_GATKHCSBGrefine_4117:HG3_10X_allpass_1254:HG2_Ill_scalpel_5981:HG2_Ill_manta_1753:HG2_Ill_breakscan11_898:HG2_Ill_SpiralSDKrefine_13885:HG2_Ill_SVrefine2DISCOVARplusDovetail_10576:HG2_Ill_GATKHCSBGrefine_4255:HG2_10X_SVrefine210Xhap12_4463;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4463:HG2_Ill_GATKHCSBGrefine_4255:HG2_Ill_SVrefine2DISCOVARplusDovetail_10576:HG2_Ill_SpiralSDKrefine_13885:HG2_Ill_breakscan11_898:HG2_Ill_manta_1753:HG2_Ill_scalpel_5981:HG3_10X_allpass_1254:HG3_Ill_GATKHCSBGrefine_4117:HG3_Ill_SVrefine2DISCOVARDovetail_4596:HG3_Ill_manta_1446:HG3_Ill_scalpel_6079:HG3_PB_SVrefine2Falcon1Dovetail_3791:HG3_PB_SVrefine2PBcRDovetail_2818:HG3_PB_pbsv_5913:HG4_PB_SVrefine2Falcon1Dovetail_3696:HG4_PB_assemblyticsfalcon_21317;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0545746;ClusterMaxSizeDiff=0.0545746;ClusterMaxEditDist=0.0545746;PBcalls=7;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-58;DistForward=5062;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:116428183-116428513;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:28:2:1:22:./.:0:0:0:0:0/1:33:23:0/1:21:7:.:.:.
chr5	117801529	HG4_Ill_GATKHCSBGrefine_4331	GGGAGGGAGGGAGGGAGAGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4468:HG4_PB_HySA_9079:HG4_Ill_svaba_7928:HG4_PB_assemblyticsfalcon_21329:HG4_Ill_GATKHC_10283:HG4_Ill_GATKHCSBGrefine_4331:HG2_Ill_svaba_7819;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_svaba_7819:HG4_Ill_GATKHCSBGrefine_4331:HG4_Ill_GATKHC_10283:HG4_Ill_svaba_7928;NumExactMatchSVs=4;ClusterMaxShiftDist=0.150943;ClusterMaxSizeDiff=0.150943;ClusterMaxEditDist=0.320755;PBcalls=2;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-52;DistBack=-26;DistForward=3;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=127;REFWIDENED=5:117801470-117801648;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3232.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:22:0|1:17:4:0:15:./.:0:0:0:0:./.:5:3:./.:.:.:.:.:.
chr5	117868223	HG4_Ill_manta_1525	GGACATAGTTACCATCTAGAACCTGTAAGTAATAACCCAATCCCCCTGAGTTATCTGGGTGACAAAAGCTGTTGATACCTCAAATCTCCATGGCTCAGCACCATGAAGACTTACTTCTAACCCAAGTGAAAGCTCAAAACAGGTACTGTAGATATACAGTAGTTCAAAGATCCAGGTTTCATTTATCCTTCACTTGGGCCTCTGCACCCAGGCAAAGGGGAAAAAAATGGACACACATCACTTCAGTTTCATTCTACTGGGAGCACTAGTCACAGGCCATTCCTGGATGCCAGTGGCCATGTGGTACATGGC	CA	20	PASS	ClusterIDs=HG2_PB_pbsv_6096:HG4_Ill_GATKHCSBGrefine_4332:HG2_Ill_GATKHCSBGrefine_4259:HG2_10X_allpass_1021:HG4_10X_allpass_1183:HG2_Ill_tnscope_712:HG2_Ill_SpiralSDKrefine_13890:HG4_PB_SVrefine2PBcRDovetail_3050:HG4_PB_SVrefine2Falcon1Dovetail_3698:HG4_Ill_manta_1525:HG4_Ill_SVrefine2DISCOVARDovetail_4506:HG4_Ill_Cortex_2988:HG2_PB_SVrefine2PBcRplusDovetail_9075:HG2_PB_SVrefine2PB10Xhap12_4442:HG2_PB_SVrefine2Falcon1plusDovetail_9727:HG2_Ill_manta_1756:HG2_Ill_Cortex_7240:HG2_10X_SVrefine210Xhap12_4469:HG2_Ill_MetaSV_4091:HG4_Ill_Spiral_508:HG2_Ill_Spiral_453:HG4_Ill_MetaSV_4251:HG4_Ill_svaba_7931:HG2_Ill_svaba_7822:HG4_Ill_Krunchall_9035:HG2_Ill_Krunchall_8714:HG4_PB_pbsv_6121;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4469:HG2_Ill_Cortex_7240:HG2_Ill_manta_1756:HG2_PB_SVrefine2Falcon1plusDovetail_9727:HG2_PB_SVrefine2PB10Xhap12_4442:HG2_PB_SVrefine2PBcRplusDovetail_9075:HG4_Ill_Cortex_2988:HG4_Ill_SVrefine2DISCOVARDovetail_4506:HG4_Ill_manta_1525:HG4_PB_SVrefine2Falcon1Dovetail_3698:HG4_PB_SVrefine2PBcRDovetail_3050;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0225443;ClusterMaxSizeDiff=0.0225443;ClusterMaxEditDist=0.0257235;PBcalls=7;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-11672;DistForward=-312;DistMin=-11672;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:117868223-117868534;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9968;PctRecOverlap=0.9968;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3233.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:30:0|1:47:0:0:27:./.:0:0:0:0:0/1:52:21:0/1:38:9:.:.:.
chr5	118773716	HG2_PB_assemblyticsPBcR_21119	AAGACAGAGAGTCAAAGAGAGAGAGAGAGAAAGAGAGAGGCAGAGAGAAAGAGACACAGAGACAAAGAGAGAGAAAG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8017:HG2_PB_assemblyticsfalcon_21863:HG4_PB_pbsv_6127:HG4_PB_HySA_9085:HG2_PB_pbsv_6103:HG2_PB_HySA_11348:HG3_PB_pbsv_5927:HG4_PB_assemblyticsfalcon_21343:HG4_Ill_GATKHCSBGrefine_4334:HG4_Ill_250bpfermikitraw_8618:HG4_Ill_150bpfermikitraw_8249:HG3_Ill_GATKHCSBGrefine_4128:HG2_PB_assemblyticsPBcR_21119:HG2_Ill_SpiralSDKrefine_13898:HG2_Ill_GATKHCSBGrefine_4261:HG2_Ill_250bpfermikitraw_8542;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8017:HG4_PB_assemblyticsfalcon_21343:HG4_Ill_GATKHCSBGrefine_4334:HG4_Ill_250bpfermikitraw_8618:HG4_Ill_150bpfermikitraw_8249:HG3_Ill_GATKHCSBGrefine_4128:HG2_PB_assemblyticsPBcR_21119:HG2_Ill_SpiralSDKrefine_13898:HG2_Ill_GATKHCSBGrefine_4261:HG2_Ill_250bpfermikitraw_8542;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0526316;ClusterMaxEditDist=0.0533333;PBcalls=8;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-76;DistBack=4860;DistForward=167353;DistMin=4860;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=265;REFWIDENED=5:118773557-118773897;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:48:1/1:3:23:0:13:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr5	119015144	HG3_Ill_GATKHCSBGrefine_4130	TGAGAAGTCTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_899:HG3_PB_assemblyticsfalcon_21796:HG2_PB_assemblyticsPBcR_21120:HG4_PB_assemblyticsfalcon_21345:HG2_PB_assemblyticsfalcon_21864:HG2_Ill_Krunchall_8725:HG2_PB_HySA_11349:HG4_PB_pbsv_6129:HG3_PB_SVrefine2Falcon1Dovetail_3799:HG3_Ill_MetaSV_4267:HG2_Ill_tnscope_713:HG2_Ill_MetaSV_4092:HG4_PB_SVrefine2PBcRDovetail_3053:HG4_PB_SVrefine2Falcon1Dovetail_3703:HG4_Ill_scalpel_5890:HG4_Ill_manta_1527:HG4_Ill_MetaSV_4252:HG4_Ill_GATKHCSBGrefine_4336:HG4_10X_allpass_1184:HG3_PB_pbsv_5929:HG3_PB_SVrefine2PBcRDovetail_2823:HG3_Ill_scalpel_6098:HG3_Ill_manta_1450:HG3_Ill_GATKHCSBGrefine_4130:HG3_10X_allpass_1255:HG2_PB_pbsv_6104:HG2_PB_SVrefine2PBcRplusDovetail_9082:HG2_PB_SVrefine2PB10Xhap12_4448:HG2_PB_SVrefine2Falcon2Bionano_3046:HG2_PB_SVrefine2Falcon1plusDovetail_9734:HG2_Ill_scalpel_5993:HG2_Ill_manta_1758:HG2_Ill_SVrefine2DISCOVARplusDovetail_10591:HG2_Ill_GATKHCSBGrefine_4262:HG2_10X_allpass_1022:HG2_10X_SVrefine210Xhap12_4473;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4473:HG2_10X_allpass_1022:HG2_Ill_GATKHCSBGrefine_4262:HG2_Ill_SVrefine2DISCOVARplusDovetail_10591:HG2_Ill_manta_1758:HG2_Ill_scalpel_5993:HG2_PB_SVrefine2Falcon1plusDovetail_9734:HG2_PB_SVrefine2Falcon2Bionano_3046:HG2_PB_SVrefine2PB10Xhap12_4448:HG2_PB_SVrefine2PBcRplusDovetail_9082:HG2_PB_pbsv_6104:HG3_10X_allpass_1255:HG3_Ill_GATKHCSBGrefine_4130:HG3_Ill_manta_1450:HG3_Ill_scalpel_6098:HG3_PB_SVrefine2PBcRDovetail_2823:HG3_PB_pbsv_5929:HG4_10X_allpass_1184:HG4_Ill_GATKHCSBGrefine_4336:HG4_Ill_MetaSV_4252:HG4_Ill_manta_1527:HG4_Ill_scalpel_5890:HG4_PB_SVrefine2Falcon1Dovetail_3703:HG4_PB_SVrefine2PBcRDovetail_3053;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0793651;ClusterMaxSizeDiff=0.0793651;ClusterMaxEditDist=0.0793651;PBcalls=16;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-188;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:119015145-119015477;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3235.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:3:33:2:24:./.:0:0:0:0:1/1:0:53:./.:1:15:.:.:.
chr5	119380147	HG4_Ill_SVrefine2DISCOVARDovetail_4513	TACATTTTATAATGTTCTGCCATTATTATCTGTGTAGGTTTTTGGCTCTTTAAAATGTTCATTTATCTCATCTGAAAAATAGAATTAAAATTCCTATCTAATAGGGTTTGGGTAAGGATTAATTGAATTAATACATTTCAAAGCACTCATACTAAAATTTTCAATAAATATGAGGTATTGTTATAGGTGTCAGCTTCTAAGATGGCTCCAATGATCCCACCTTCTGGTATTCATACTCTTGTGTGGTCTCCCCCAGCATCATACACCAGGGACGGTTTGTGTGACCAATAACATTCTGCAAAAGTGATAATATTTTACCTCTGAGATTATGTATACAAGATCCTATGGCTCTGATTTGATGATTCTCTGACTCTCTTGGATTACTCACTTGGGGAAAAAGAAACCATCATATTGTGAACATCTTTAAGGAATCTTCTACATGGCAGGGAACTGAAGCCTCAGGTCAGGGTCCAGCCAGAAATGGAGGCATGACAACCATGCGAGTGAGCTTGGAAGCAGATTCTCCAACTCCAGCCAACCTATTTGACTATAGTCCTGGTCCACAGCTTGATTGCAACCTTCTGAGAGATTGTGAGATAATAAATGTTTCTTGTCTTTAAGATGCTAAATATTTGGATAATGTTTTATGACCAATTTGCCTACTGTTTCAGATACAAAGCAGGCATATTTTTCTAAATTATTCCATATAGTCTCCCTTTCCCAAAAAACCCTATCAAGGTTTAAATTATTAAGCCAATATTATGGGCGAAGAAATGGAAATATCTCAAGAATACTCAATTATTTGGGTATATAAGTCATACTTCCTTTCGTCCTCATGTCATAGTATAAAGCCTAAATAACCTCAACATGTTGCTCTTGCCCCCTTAATATAGTAATACTTTGCAGAGCCTTTAGTAGTAGAGCAAAGGTGTGGCTCAACAGCTATTGCTTAGAAGCTTAGAAGAAAATGCAGGGGAAATATACAGTTTTTCTCTGTGTAGAGAAAGGAAATAATTACCAGATGTAAGGTGAAGAGAGTATTTTCCTAGGATGAAGAGAGATGGATTTACATGGAATTCTGCACTTGGGAGAATAATCAAAGTCAAGTGACATCAGTTTTTTGTTTTCTTCAATATCTCCATTCAGAGAGGTTTGTCAGGTAGTAAGGTGTACAGCTGCAGAAAAGCTTCAGGGTTTCAAGCATTGTAAATAATTTTATATAATTATTGTTTAGGCTTGATCTTTGTACACTAAAAAGTATGGAAAGTGAGATCCCTTTGTAAAATGGTATCTTTCTTTATTAATAAAAGGAAAACCTTGGAGATGCCCTTATAGCTCTTAAATGTGACCCAATTCTAATTACCTCCCAGTAAAATCAACAGCCCTTTGTTTTATTTGAAGAGAAACAGGGAAGATAATGTATGTTGCCACTGAAAGAAGTAGGAGGGCATAAATAAGGCAAGATGATTTATTCTAGTTTTTCTATAATGGAAAATCTGTCATGAAGCAGAAAGAACATGAAGGTGAATAATTTTTAGTTTCTCTCTATAAACTTTTGTTATTTCTATCAGAGGAATGACAATTCAATTACATTATTTCAAATAAAAAATTATTGTTCAAATTACATACAGCAGGATTGTATAACCCACTTGCCCTTGACTTTAGAAGTGAACATACTAGAAGTCAAAAACAATTCGCTTGAATATTTAACTATCGTTAATCATGTGAGTTTTATAAACTAATCATTTTTTAAAATTTTATACACCAACATACTCAGATGTGAAAATAAAACAGGAAAAAAAGTAAAACAAAACTTAAGTAGCTAATGCTTTTTTGAGTACTTTCTATCTGCTAGAAACTGTAAAAAGTGGCAGACTGCTCAGTAGTTCAGTAAAATAAATACAGATTTGAGAGTTGCCTCAAATGTGATAGCCTAATTTTGACAAGGAGAAAAGGTATTTGGTTTTCAAATACTACATAAGAACAATTTCCAATATTAGAACAAGTGTTCACTGACTCTAGGGCAAGTGTACTTAAAATTACTTATCTGTCTATTCCCTCACTATAAATTTTGTTGAAGAATTACATAGGTCATGAAAAGTGCATATGTCATTTGTTTAAAAGTTAATGAAATGTATAAAGTGAGCACAGTCATGTAAATGGCACTAAGATTAGGACTATAGAAGTTACCACTATCCCAAATTCTAACTCTATAGTATTGCAAATCTTTTAAATTAATGAAATATACAGTATGCAATGTTCTGTTTCTTTTTTCCTTTCAACATTAAATTTGAGAGATTTATCTTTTTCTTTTGCATATGAGAATAGACATTAGTTTGCTTTATATATACCACTTAGGAGTAGAATATCTGGATGATAGAACATGCATATTGTTATAGTAGAGATTTCTAAGCAGTTTTTCAAATGGATTGTACTTATACTCCAACCAGCTATGTATGAAAATTATAGTTTCCCTAAATGCTAGCCAACACTTGATTGTATCTAGCTTTTGTTTTAGATATTCCAGTAGTTGT	GAG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4093:HG2_Ill_GATKHCSBGrefine_4264:HG3_PB_pbsv_5931:HG2_PB_pbsv_6105:HG4_PB_pbsv_6130:HG4_PB_SVrefine2PBcRDovetail_3054:HG4_PB_SVrefine2Falcon1Dovetail_3704:HG4_Ill_SVrefine2DISCOVARDovetail_4513:HG3_PB_SVrefine2Falcon1Dovetail_3800:HG2_PB_assemblyticsPBcR_21123:HG2_PB_SVrefine2PBcRplusDovetail_9083:HG2_PB_SVrefine2PB10Xhap12_4449:HG2_PB_SVrefine2Falcon2Bionano_3047:HG2_PB_SVrefine2Falcon1plusDovetail_9735:HG2_PB_PB10Xdip_22991:HG2_Ill_SVrefine2DISCOVARplusDovetail_10592:HG2_10X_SVrefine210Xhap12_4475:HG2_Ill_tnscope_714:HG4_PB_assemblyticsfalcon_21347:HG3_PB_assemblyticsfalcon_21798:HG2_PB_assemblyticsfalcon_21867:HG2_10X_allpass_1023:HG3_Ill_Krunchall_8529:HG3_10X_allpass_1256:HG3_Ill_MetaSV_4268:HG4_Ill_MetaSV_4253;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4475:HG2_Ill_SVrefine2DISCOVARplusDovetail_10592:HG2_PB_PB10Xdip_22991:HG2_PB_SVrefine2Falcon1plusDovetail_9735:HG2_PB_SVrefine2Falcon2Bionano_3047:HG2_PB_SVrefine2PB10Xhap12_4449:HG2_PB_SVrefine2PBcRplusDovetail_9083:HG2_PB_assemblyticsPBcR_21123:HG3_PB_SVrefine2Falcon1Dovetail_3800:HG4_Ill_SVrefine2DISCOVARDovetail_4513:HG4_PB_SVrefine2Falcon1Dovetail_3704:HG4_PB_SVrefine2PBcRDovetail_3054;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0718661;ClusterMaxSizeDiff=0.0718661;ClusterMaxEditDist=0.0718661;PBcalls=15;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2531;DistBack=-168;DistForward=912;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:119380147-119382680;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9996;PctRecOverlap=0.9988;SizeDiff=1;StartDistance=-1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=3236.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:10:110:1/1:5:17:2:19:./.:0:0:0:0:1/1:0:32:1/1:1:119:2707:.:.
chr5	119969405	HG2_Ill_250bpfermikitraw_8551	CCCAAATTTGTAAAACAGTTACTACTAGACCTAAGAAATGAGATAGACAGCAACACAATAATAGTGGAGGA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9739:HG2_PB_HySA_11357:HG4_PB_assemblyticsfalcon_21353:HG4_Ill_GATKHC_10296:HG4_Ill_GATKHCSBGrefine_4338:HG3_Ill_GATKHC_10162:HG3_Ill_GATKHCSBGrefine_4132:HG4_Ill_manta_1528:HG3_Ill_manta_1451:HG2_PB_pbsv_6108:HG3_PB_pbsv_5933:HG4_PB_pbsv_6133:HG4_PB_HySA_9089:HG4_Ill_svaba_7942:HG4_Ill_Krunchall_9046:HG4_Ill_250bpfermikitraw_8623:HG4_Ill_150bpfermikitraw_8254:HG3_PB_assemblyticsfalcon_21804:HG3_Ill_svaba_7931:HG3_Ill_Krunchall_8531:HG3_Ill_GATKHCSBGrefine_4131:HG3_Ill_250bpfermikitraw_8266:HG3_Ill_150bpfermikitraw_8075:HG2_Ill_svaba_7837:HG2_Ill_manta_1759:HG2_Ill_SpiralSDKrefine_13907:HG2_Ill_Krunchall_8733:HG2_Ill_GATKHCSBGrefine_4266:HG2_Ill_250bpfermikitraw_8551:HG3_PB_HySA_9414:HG2_PB_SVrefine2PB10Xhap12_4453:HG2_PB_SVrefine2Falcon2Bionano_3049;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8551:HG2_Ill_GATKHCSBGrefine_4266:HG2_Ill_Krunchall_8733:HG2_Ill_SpiralSDKrefine_13907:HG2_Ill_manta_1759:HG2_Ill_svaba_7837:HG3_Ill_150bpfermikitraw_8075:HG3_Ill_250bpfermikitraw_8266:HG3_Ill_GATKHCSBGrefine_4131:HG3_Ill_Krunchall_8531:HG3_Ill_svaba_7931:HG3_PB_assemblyticsfalcon_21804:HG4_Ill_150bpfermikitraw_8254:HG4_Ill_250bpfermikitraw_8623:HG4_Ill_Krunchall_9046:HG4_Ill_svaba_7942;NumExactMatchSVs=16;ClusterMaxShiftDist=0.10219;ClusterMaxSizeDiff=0.10219;ClusterMaxEditDist=0.119403;PBcalls=11;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=121561;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=79;REFWIDENED=5:119969398-119969546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:43:./.:31:15:3:20:./.:0:0:0:0:0/1:37:24:./.:.:.:.:.:.
chr5	120313018	HG2_10X_SVrefine210Xhap12_4479	TAAAGAAGAGCAAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTATAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCCCTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_900:HG3_PB_assemblyticsfalcon_21808:HG2_PB_assemblyticsfalcon_21879:HG4_PB_HySA_9092:HG2_PB_pbsv_6109:HG4_PB_pbsv_6134:HG4_Ill_MetaSV_4254:HG2_Ill_tnscope_715:HG4_PB_SVrefine2PBcRDovetail_3058:HG4_Ill_scalpel_5898:HG4_Ill_manta_1529:HG4_Ill_SVrefine2DISCOVARDovetail_4518:HG4_Ill_GATKHCSBGrefine_4339:HG3_PB_SVrefine2Falcon1Dovetail_3802:HG2_PB_SVrefine2PB10Xhap12_4454:HG2_PB_SVrefine2Falcon2Bionano_3050:HG2_PB_SVrefine2Falcon1plusDovetail_9740:HG2_Ill_scalpel_6005:HG2_Ill_manta_1760:HG2_Ill_SVrefine2DISCOVARplusDovetail_10596:HG2_Ill_MetaSV_4094:HG2_Ill_GATKHCSBGrefine_4267:HG2_10X_SVrefine210Xhap12_4479;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4479:HG2_Ill_GATKHCSBGrefine_4267:HG2_Ill_MetaSV_4094:HG2_Ill_SVrefine2DISCOVARplusDovetail_10596:HG2_Ill_manta_1760:HG2_Ill_scalpel_6005:HG2_PB_SVrefine2Falcon1plusDovetail_9740:HG2_PB_SVrefine2Falcon2Bionano_3050:HG2_PB_SVrefine2PB10Xhap12_4454:HG3_PB_SVrefine2Falcon1Dovetail_3802:HG4_Ill_GATKHCSBGrefine_4339:HG4_Ill_SVrefine2DISCOVARDovetail_4518:HG4_Ill_manta_1529:HG4_Ill_scalpel_5898:HG4_PB_SVrefine2PBcRDovetail_3058;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0936995;ClusterMaxSizeDiff=0.0936995;ClusterMaxEditDist=0.0936995;PBcalls=10;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=139685;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:120313019-120313348;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:36:0|1:53:1:0:28:./.:0:0:0:0:0/1:18:31:0/1:18:6:.:.:.
chr5	121059231	HG4_PB_SVrefine2Falcon1Dovetail_3707	ATACTGCTTTAGTTGTATCCCAGAGATTCTTGTACGTTGTCTTTTATCTCATTGGGTTCAAAGAACTTCATTATTTCTGCTTAAATTTGTTATTTACCAAGTAGTCCTTCAGGAGCATGTTGTTCAGTTTCCATGTAGTTGTGCGGTTTTGAGTGCGTTTCTTAATCCTGAGTTCTAATTTGATTGCACTGTGGTCTGAGAGGCTGTTTGTTATGATTTCCATTCTTTTGCATTTGCTGAGGAGTTTTACTTCTAATTATGTGGTCGATTTTAGAATAAGTGCTATGTGGTGTTAAGAAAAATGTATATTCTGTTGATCTGGGGCAGAGAGTTCTATAGATATCTATTAAGTCTGCTTGGTCCAGAGCTGAGTTCAAGTCCTGAATATCCTTGTGAATTTTCTGTCTCCATCTGTCTAATACTGACAGTGGGGTGTTAAAGTCTCCCACTATTATTGTGTGGGAGTCTAAGTCTCTTTGTAGGTATCTAAGACCTTGTTTTATGAATCTGGATGCTCTTGTATTGGGTGCATATATATTTAGGATATTTAGCTCTTCTTGTTGCATTGATCCCTTTACCATGTAATGCCTTTTTTTGTCTTTTTTGATCTTTGTTGATTTAAAATATGTTTTATCAGAGACTAGGATTGCAACTCCTTCTTTTTTATTTTTCTTTCCATTTGCTTGGTAAATATTCCTCCATCCCTTTATTTTGACCCTATGTGTGTCTTTGCACATGAGATGGGTCTCCTGAATACAGCACACCAATTGGTCTTGAATC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_6138:HG4_10X_allpass_1186:HG2_10X_allpass_1025:HG4_Ill_Krunchall_9059:HG3_Ill_Krunchall_8547:HG2_Ill_Krunchall_8749:HG2_Ill_tnscope_716:HG4_PB_assemblyticsfalcon_21368:HG4_PB_SVrefine2PBcRDovetail_3060:HG4_PB_SVrefine2Falcon1Dovetail_3707:HG4_Ill_svaba_7955:HG4_Ill_manta_1532:HG4_Ill_SVrefine2DISCOVARDovetail_4523:HG4_Ill_MetaSV_4256:HG4_Ill_GATKHCSBGrefine_4344:HG3_PB_pbsv_5943:HG3_PB_assemblyticsfalcon_21819:HG3_PB_SVrefine2Falcon1Dovetail_3809:HG3_Ill_svaba_7943:HG3_Ill_SVrefine2DISCOVARDovetail_4617:HG3_Ill_MetaSV_4272:HG3_Ill_GATKHCSBGrefine_4143:HG3_10X_allpass_1260:HG2_PB_pbsv_6115:HG2_PB_SVrefine2PB10Xhap12_4459:HG2_PB_SVrefine2Falcon1plusDovetail_9742:HG2_Ill_svaba_7851:HG2_Ill_SpiralSDKrefine_13916:HG2_Ill_MetaSV_4097:HG2_Ill_GATKHCSBGrefine_4273:HG2_10X_SVrefine210Xhap12_4483:HG4_Ill_Spiral_511:HG2_PB_assemblyticsfalcon_21888;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4483:HG2_Ill_GATKHCSBGrefine_4273:HG2_Ill_MetaSV_4097:HG2_Ill_SpiralSDKrefine_13916:HG2_Ill_svaba_7851:HG2_PB_SVrefine2Falcon1plusDovetail_9742:HG2_PB_SVrefine2PB10Xhap12_4459:HG2_PB_pbsv_6115:HG3_10X_allpass_1260:HG3_Ill_GATKHCSBGrefine_4143:HG3_Ill_MetaSV_4272:HG3_Ill_SVrefine2DISCOVARDovetail_4617:HG3_Ill_svaba_7943:HG3_PB_SVrefine2Falcon1Dovetail_3809:HG3_PB_assemblyticsfalcon_21819:HG3_PB_pbsv_5943:HG4_Ill_GATKHCSBGrefine_4344:HG4_Ill_MetaSV_4256:HG4_Ill_SVrefine2DISCOVARDovetail_4523:HG4_Ill_manta_1532:HG4_Ill_svaba_7955:HG4_PB_SVrefine2Falcon1Dovetail_3707:HG4_PB_SVrefine2PBcRDovetail_3060:HG4_PB_assemblyticsfalcon_21368;NumExactMatchSVs=24;ClusterMaxShiftDist=0.00900322;ClusterMaxSizeDiff=0.00900322;ClusterMaxEditDist=0.00900901;PBcalls=11;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-779;DistBack=-325;DistForward=-611;DistMin=-611;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:121059232-121060011;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3239.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:24:0|1:32:0:0:21:./.:0:0:0:0:0/1:59:19:0/1:77:15:.:.:.
chr5	121260036	HG2_Ill_Krunchall_8750	ATAAGCCTGAAATTCAGGCTTAGACTAGGAAGTATAGTCTAAGCCTGAAATTCAGGCTTAGACTAGGAAGTATAGTC	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8040:HG2_PB_HySA_11373:HG4_Ill_GATKHC_10312:HG4_Ill_GATKHCSBGrefine_4345:HG3_Ill_GATKHC_10182:HG3_Ill_GATKHCSBGrefine_4144:HG2_Ill_GATKHC_10203:HG2_Ill_GATKHCSBGrefine_4274:HG4_Ill_manta_1533:HG3_Ill_manta_1455:HG4_Ill_Spiral_512:HG3_Ill_Spiral_6729:HG2_Ill_Spiral_455:HG4_PB_pbsv_6139:HG2_PB_pbsv_6116:HG3_PB_pbsv_5944:HG4_PB_HySA_9100:HG3_PB_HySA_9430:HG4_PB_assemblyticsfalcon_21369:HG4_Ill_svaba_7957:HG4_Ill_Krunchall_9061:HG4_Ill_250bpfermikitraw_8639:HG4_Ill_150bpfermikitraw_8272:HG4_10X_allpass_1187:HG3_PB_assemblyticsfalcon_21820:HG3_Ill_svaba_7944:HG3_Ill_Krunchall_8548:HG3_Ill_250bpfermikitraw_8279:HG3_Ill_150bpfermikitraw_8092:HG2_PB_assemblyticsfalcon_21889:HG2_Ill_svaba_7852:HG2_Ill_Krunchall_8750:HG2_Ill_250bpfermikitraw_8565;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8040:HG4_PB_assemblyticsfalcon_21369:HG4_Ill_svaba_7957:HG4_Ill_Krunchall_9061:HG4_Ill_250bpfermikitraw_8639:HG4_Ill_150bpfermikitraw_8272:HG4_10X_allpass_1187:HG3_PB_assemblyticsfalcon_21820:HG3_Ill_svaba_7944:HG3_Ill_Krunchall_8548:HG3_Ill_250bpfermikitraw_8279:HG3_Ill_150bpfermikitraw_8092:HG2_PB_assemblyticsfalcon_21889:HG2_Ill_svaba_7852:HG2_Ill_Krunchall_8750:HG2_Ill_250bpfermikitraw_8565;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0526316;ClusterMaxEditDist=0.0533333;PBcalls=9;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-76;DistBack=32119;DistForward=77128;DistMin=32119;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=86;REFWIDENED=5:121260037-121260198;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:36:0|1:40:1:3:34:./.:0:0:0:0:0/1:30:24:./.:.:.:.:.:.
chr5	121576115	HG4_Ill_GATKHCSBGrefine_4346	TAAGAGATACAATTTCACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAAACCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCGACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCAACCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACGCCACACCTATTCCAAAATTGACCACATACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCTGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGCTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCACTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATGCACTCTCCCAAGACTAAACCACGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAATTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCTTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAATGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATGAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTCTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTTCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCACATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTAACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGACATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTGACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTCAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACATGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAATTAAAAAAAAAAAATTTAAAAAAAAAAAGAAAAAAGAAAAAAAATAAAAAAAATAAAAAAAAAAGAAAAGAAGAGCATTTGTTTGGATATATATGTATTTGAGCATGTCATTTATTTTTAAATTTTTCACAACTTTGTTGGACATCTAGTAATAATTAAATACTTTTTAAATTTAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_9063:HG4_10X_allpass_1188:HG2_10X_allpass_1026:HG4_PB_pbsv_6140:HG2_PB_assemblyticsPBcR_21145:HG2_Ill_tnscope_717:HG4_PB_SVrefine2Falcon1Dovetail_3708:HG4_Ill_MetaSV_4257:HG4_Ill_GATKHCSBGrefine_4346:HG2_PB_pbsv_6117:HG2_PB_assemblyticsfalcon_21891:HG2_PB_SVrefine2PBcRplusDovetail_9090:HG2_PB_SVrefine2PB10Xhap12_4460:HG2_PB_SVrefine2Falcon2Bionano_3053:HG2_PB_SVrefine2Falcon1plusDovetail_9743:HG2_Ill_breakscan11_901:HG2_Ill_GATKHCSBGrefine_4275:HG2_10X_SVrefine210Xhap12_4484:HG2_Ill_MetaSV_4098:HG4_Ill_Krunchall_9064:HG2_Ill_Krunchall_8752;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4484:HG2_Ill_GATKHCSBGrefine_4275:HG2_Ill_breakscan11_901:HG2_PB_SVrefine2Falcon1plusDovetail_9743:HG2_PB_SVrefine2Falcon2Bionano_3053:HG2_PB_SVrefine2PB10Xhap12_4460:HG2_PB_SVrefine2PBcRplusDovetail_9090:HG2_PB_assemblyticsfalcon_21891:HG2_PB_pbsv_6117:HG4_Ill_GATKHCSBGrefine_4346:HG4_Ill_MetaSV_4257:HG4_PB_SVrefine2Falcon1Dovetail_3708;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0224362;ClusterMaxSizeDiff=0.0224362;ClusterMaxEditDist=0.0304937;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-4693;DistBack=806;DistForward=-4684;DistMin=-4684;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:121576116-121580824;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:72:0|1:51:1:0:35:./.:0:0:0:0:0/1:45:23:0/1:336:175:5275:.:.
chr5	121834309	HG4_Ill_GATKHC_10318	GCACTAGATCAGAAATAATTATCAACACTGAATATGGTCCTTAGTATGCCCAAACCTAAACATGTTTCTTCCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4487:HG4_PB_HySA_9102:HG4_PB_pbsv_6141:HG2_PB_pbsv_6118:HG4_Ill_svaba_7961:HG4_Ill_scalpel_5905:HG4_Ill_manta_1534:HG4_Ill_Krunchall_9068:HG4_Ill_GATKHC_10318:HG4_Ill_GATKHCSBGrefine_4347:HG4_Ill_250bpfermikitraw_8644:HG4_Ill_150bpfermikitraw_8276:HG3_Ill_svaba_7945:HG2_Ill_svaba_7854:HG2_Ill_scalpel_6014:HG2_Ill_manta_1763:HG2_Ill_SpiralSDKrefine_13919:HG2_Ill_Krunchall_8754:HG2_Ill_GATKHC_10206:HG2_Ill_GATKHCSBGrefine_4276:HG2_Ill_250bpfermikitraw_8568:HG4_PB_SVrefine2PBcRDovetail_3061:HG4_Ill_SVrefine2DISCOVARDovetail_4528:HG3_PB_SVrefine2Falcon1Dovetail_3810:HG2_PB_SVrefine2Falcon1plusDovetail_9744:HG2_PB_HySA_11376;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8568:HG2_Ill_GATKHCSBGrefine_4276:HG2_Ill_GATKHC_10206:HG2_Ill_Krunchall_8754:HG2_Ill_SpiralSDKrefine_13919:HG2_Ill_manta_1763:HG2_Ill_scalpel_6014:HG2_Ill_svaba_7854:HG3_Ill_svaba_7945:HG4_Ill_150bpfermikitraw_8276:HG4_Ill_250bpfermikitraw_8644:HG4_Ill_GATKHCSBGrefine_4347:HG4_Ill_GATKHC_10318:HG4_Ill_Krunchall_9068:HG4_Ill_manta_1534:HG4_Ill_scalpel_5905:HG4_Ill_svaba_7961;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.056338;PBcalls=7;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=-72;DistBack=24198;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=72;REFWIDENED=5:121834288-121834431;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:18:0|1:37:1:3:17:./.:0:0:0:0:0/1:26:18:./.:.:.:.:.:.
chr5	122274354	HG4_PB_SVrefine2Falcon1Dovetail_3709	GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAATGAAA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_5946:HG3_Ill_MetaSV_4274:HG2_Ill_MetaSV_4099:HG4_PB_assemblyticsfalcon_21375:HG4_PB_SVrefine2Falcon1Dovetail_3709:HG4_Ill_manta_1535:HG4_Ill_GATKHCSBGrefine_4349:HG3_PB_assemblyticsfalcon_21823:HG3_PB_SVrefine2Falcon1Dovetail_3811:HG3_Ill_scalpel_6115:HG3_Ill_manta_1456:HG3_Ill_GATKHCSBGrefine_4146:HG3_10X_allpass_1261:HG2_PB_SVrefine2Falcon1plusDovetail_9745:HG2_Ill_GATKHCSBGrefine_4278:HG2_10X_allpass_1027:HG2_PB_SVrefine2PB10Xhap12_4462:HG2_PB_PB10Xdip_23193:HG2_PB_PB10Xdip_23194:HG2_PB_assemblyticsPBcR_21150:HG2_PB_SVrefine2PBcRplusDovetail_9091:HG4_PB_SVrefine2PBcRDovetail_3062:HG2_PB_assemblyticsfalcon_21896:HG4_Ill_Krunchall_9077:HG3_Ill_Krunchall_8553:HG2_PB_pbsv_6120:HG4_PB_pbsv_6142:HG2_Ill_tnscope_718:HG2_PB_SVrefine2PB10Xhap12_4461:HG2_10X_SVrefine210Xhap12_4490;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_1027:HG2_Ill_GATKHCSBGrefine_4278:HG2_PB_SVrefine2Falcon1plusDovetail_9745:HG3_10X_allpass_1261:HG3_Ill_GATKHCSBGrefine_4146:HG3_Ill_manta_1456:HG3_Ill_scalpel_6115:HG3_PB_SVrefine2Falcon1Dovetail_3811:HG3_PB_assemblyticsfalcon_21823:HG4_Ill_GATKHCSBGrefine_4349:HG4_Ill_manta_1535:HG4_PB_SVrefine2Falcon1Dovetail_3709:HG4_PB_assemblyticsfalcon_21375;NumExactMatchSVs=13;ClusterMaxShiftDist=0.33719;ClusterMaxSizeDiff=0.33719;ClusterMaxEditDist=0.33719;PBcalls=16;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-1;DistForward=-153;DistMin=-153;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:122274355-122274677;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3243.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:0|1:29:0:3:27:./.:0:0:0:0:0/1:34:14:0/1:24:6:.:.:.
chr5	123675102	HG4_Ill_Cortex_2996	TAGAGGAGACTGTGACCAATACCAACACTGAAGACCTGGACAGATGAAGATGAGAACACAAGGAAAACTGAGAGGAAGGGGCCAGAG	T	20	PASS	ClusterIDs=HG2_10X_allpass_1028:HG2_PB_assemblyticsfalcon_21905:HG4_Ill_Krunchall_9089:HG2_Ill_Krunchall_8774:HG4_PB_pbsv_6148:HG4_PB_HySA_9113:HG4_Ill_svaba_7977:HG4_Ill_scalpel_5916:HG4_Ill_manta_1539:HG4_Ill_Krunchall_9088:HG4_Ill_GATKHC_10337:HG4_Ill_GATKHCSBGrefine_4355:HG4_Ill_Cortex_2996:HG4_Ill_250bpfermikitraw_8661:HG4_Ill_150bpfermikitraw_8293:HG4_10X_allpass_1190:HG2_PB_pbsv_6123:HG2_PB_assemblyticsPBcR_21164:HG2_PB_HySA_11389:HG2_Ill_svaba_7870:HG2_Ill_breakscan11_902:HG2_Ill_Krunchall_8773:HG2_Ill_GATKHC_10225:HG2_Ill_GATKHCSBGrefine_4281:HG2_Ill_Cortex_7259:HG2_Ill_250bpfermikitraw_8584:HG2_Ill_150bpfermikitraw_8060;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_1028:HG4_PB_pbsv_6148:HG4_PB_HySA_9113:HG4_Ill_svaba_7977:HG4_Ill_scalpel_5916:HG4_Ill_manta_1539:HG4_Ill_Krunchall_9088:HG4_Ill_GATKHC_10337:HG4_Ill_GATKHCSBGrefine_4355:HG4_Ill_Cortex_2996:HG4_Ill_250bpfermikitraw_8661:HG4_Ill_150bpfermikitraw_8293:HG4_10X_allpass_1190:HG2_PB_pbsv_6123:HG2_PB_assemblyticsPBcR_21164:HG2_PB_HySA_11389:HG2_Ill_svaba_7870:HG2_Ill_breakscan11_902:HG2_Ill_Krunchall_8773:HG2_Ill_GATKHC_10225:HG2_Ill_GATKHCSBGrefine_4281:HG2_Ill_Cortex_7259:HG2_Ill_250bpfermikitraw_8584:HG2_Ill_150bpfermikitraw_8060;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0115607;ClusterMaxSizeDiff=0.0115607;ClusterMaxEditDist=0.0231214;PBcalls=6;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-86;DistBack=26478;DistForward=70713;DistMin=26478;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:123675103-123675190;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:./.:2:0:0:12:./.:0:0:0:0:0/1:29:19:./.:.:.:.:.:.
chr5	124484339	HG2_Ill_manta_1767	GACAAGAAGAGTTTCCATTGATCATTGTACCTTGGATATCTTCTCCATTCTTT	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_21914:HG4_PB_HySA_9124:HG3_PB_HySA_9451:HG2_PB_pbsv_6127:HG4_PB_pbsv_6152:HG3_PB_pbsv_5950:HG2_PB_HySA_11402:HG4_PB_assemblyticsfalcon_21393:HG4_Ill_svaba_7990:HG4_Ill_scalpel_5922:HG4_Ill_manta_1541:HG4_Ill_Krunchall_9099:HG4_Ill_GATKHC_10350:HG4_Ill_GATKHCSBGrefine_4358:HG4_Ill_250bpfermikitraw_8676:HG3_PB_assemblyticsfalcon_21839:HG3_Ill_svaba_7970:HG3_Ill_scalpel_6130:HG3_Ill_manta_1460:HG3_Ill_Krunchall_8576:HG3_Ill_GATKHC_10219:HG3_Ill_GATKHCSBGrefine_4152:HG3_Ill_250bpfermikitraw_8307:HG2_PB_assemblyticsPBcR_21173:HG2_Ill_svaba_7880:HG2_Ill_scalpel_6030:HG2_Ill_manta_1767:HG2_Ill_SpiralSDKrefine_13934:HG2_Ill_Krunchall_8782:HG2_Ill_GATKHC_10239:HG2_Ill_GATKHCSBGrefine_4282:HG2_Ill_250bpfermikitraw_8600:HG4_Ill_Spiral_514:HG3_Ill_Spiral_6755:HG2_Ill_Spiral_456;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8600:HG2_Ill_GATKHCSBGrefine_4282:HG2_Ill_GATKHC_10239:HG2_Ill_Krunchall_8782:HG2_Ill_SpiralSDKrefine_13934:HG2_Ill_manta_1767:HG2_Ill_scalpel_6030:HG2_Ill_svaba_7880:HG2_PB_assemblyticsPBcR_21173:HG3_Ill_250bpfermikitraw_8307:HG3_Ill_GATKHCSBGrefine_4152:HG3_Ill_GATKHC_10219:HG3_Ill_Krunchall_8576:HG3_Ill_manta_1460:HG3_Ill_scalpel_6130:HG3_Ill_svaba_7970:HG3_PB_assemblyticsfalcon_21839:HG4_Ill_250bpfermikitraw_8676:HG4_Ill_GATKHCSBGrefine_4358:HG4_Ill_GATKHC_10350:HG4_Ill_Krunchall_9099:HG4_Ill_manta_1541:HG4_Ill_scalpel_5922:HG4_Ill_svaba_7990:HG4_PB_assemblyticsfalcon_21393;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0384615;PBcalls=10;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=6238;DistForward=44636;DistMin=6238;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=5:124484340-124484443;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:66:1/1:1:38:3:23:./.:0:0:0:0:1/1:0:53:./.:.:.:.:.:.
chr5	124717345	HG3_PB_SVrefine2PBcRDovetail_2831	TAAAGATCATTCACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAAGTCAGGAGATCGAGACTCATCCTGGCTAACATGGTGAAACCCTGTCTCTACTAAAAATACTAAAACAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_904:HG2_PB_SVrefine2PB10Xhap12_4467:HG4_Ill_Krunchall_9101:HG2_PB_PB10Xdip_23200:HG4_PB_assemblyticsfalcon_21395:HG3_PB_assemblyticsfalcon_21841:HG2_PB_assemblyticsPBcR_21175:HG4_PB_pbsv_6153:HG3_PB_pbsv_5951:HG4_Ill_MetaSV_4262:HG3_Ill_MetaSV_4278:HG2_Ill_tnscope_719:HG2_Ill_MetaSV_4101:HG4_PB_SVrefine2PBcRDovetail_3065:HG4_PB_SVrefine2Falcon1Dovetail_3713:HG4_Ill_SVrefine2DISCOVARDovetail_4542:HG4_Ill_GATKHCSBGrefine_4359:HG4_10X_allpass_1192:HG3_PB_SVrefine2PBcRDovetail_2831:HG3_PB_SVrefine2Falcon1Dovetail_3814:HG3_Ill_scalpel_6132:HG3_Ill_manta_1461:HG3_Ill_SVrefine2DISCOVARDovetail_4633:HG3_Ill_GATKHCSBGrefine_4153:HG3_10X_allpass_1262:HG2_PB_pbsv_6128:HG2_PB_SVrefine2PBcRplusDovetail_9094:HG2_PB_SVrefine2PB10Xhap12_4466:HG2_PB_SVrefine2Falcon2Bionano_3057:HG2_PB_SVrefine2Falcon1plusDovetail_9750:HG2_Ill_SpiralSDKrefine_13937:HG2_Ill_SVrefine2DISCOVARplusDovetail_10613:HG2_Ill_GATKHCSBGrefine_4283:HG2_10X_allpass_1029:HG2_10X_SVrefine210Xhap12_4495;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4495:HG2_10X_allpass_1029:HG2_Ill_GATKHCSBGrefine_4283:HG2_Ill_SVrefine2DISCOVARplusDovetail_10613:HG2_Ill_SpiralSDKrefine_13937:HG2_PB_SVrefine2Falcon1plusDovetail_9750:HG2_PB_SVrefine2Falcon2Bionano_3057:HG2_PB_SVrefine2PB10Xhap12_4466:HG2_PB_SVrefine2PBcRplusDovetail_9094:HG2_PB_pbsv_6128:HG3_10X_allpass_1262:HG3_Ill_GATKHCSBGrefine_4153:HG3_Ill_SVrefine2DISCOVARDovetail_4633:HG3_Ill_manta_1461:HG3_Ill_scalpel_6132:HG3_PB_SVrefine2Falcon1Dovetail_3814:HG3_PB_SVrefine2PBcRDovetail_2831:HG4_10X_allpass_1192:HG4_Ill_GATKHCSBGrefine_4359:HG4_Ill_SVrefine2DISCOVARDovetail_4542:HG4_PB_SVrefine2Falcon1Dovetail_3713:HG4_PB_SVrefine2PBcRDovetail_3065;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0788644;ClusterMaxSizeDiff=0.0788644;ClusterMaxEditDist=0.0788644;PBcalls=16;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=4889;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:124717346-124717680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3246.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:61:0|1:26:1:5:49:./.:0:0:0:0:0/1:24:21:0/1:25:5:.:.:.
chr5	126180130	HG2_PB_SVrefine2PBcRplusDovetail_9101	CGCAGAGATACGAGGTCGGGGCACGGAAATAAGGGATTGGGACACAGAGATAAGAGGTCGGGGTGCGGAAATAAGGGATTGGGGCGCAGAGATATTAAGAGGTTGGGGCGCGGAAATAAGGGATTGGGGT	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4476:HG2_PB_pbsv_6135:HG4_PB_pbsv_6156:HG2_PB_assemblyticsfalcon_21928:HG2_PB_assemblyticsPBcR_21187:HG2_PB_SVrefine2PBcRplusDovetail_9101:HG2_PB_SVrefine2PB10Xhap12_4477:HG2_PB_SVrefine2Falcon1plusDovetail_9758:HG2_PB_PB10Xdip_23224;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9758:HG2_PB_SVrefine2PB10Xhap12_4477:HG2_PB_SVrefine2PBcRplusDovetail_9101:HG2_PB_assemblyticsPBcR_21187:HG2_PB_assemblyticsfalcon_21928;NumExactMatchSVs=5;ClusterMaxShiftDist=0.138776;ClusterMaxSizeDiff=0.137652;ClusterMaxEditDist=0.163265;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-129;DistBack=-30;DistForward=-46;DistMin=-46;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=395;REFWIDENED=5:126179819-126180342;PctSeqSimilarity=0.9859;PctSizeSimilarity=1;PctRecOverlap=0.4615;SizeDiff=0;StartDistance=70;EndDistance=70;GTMatch=0;TruScore=81;MatchId=3247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:19:0|1:17:0:0:18:./.:0:0:0:0:./.:3:2:./.:.:.:.:.:.
chr5	126942332	HG3_10X_allpass_1264	AAGGACAGTCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCGCTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4104:HG2_PB_assemblyticsPBcR_21190:HG2_PB_SVrefine2PB10Xhap12_4479:HG2_PB_PB10Xdip_23225:HG4_Ill_Krunchall_9111:HG3_Ill_Krunchall_8598:HG2_PB_HySA_11430:HG2_Ill_Krunchall_8802:HG4_Ill_Spiral_515:HG2_Ill_Spiral_457:HG3_PB_pbsv_5964:HG4_PB_pbsv_6158:HG4_PB_assemblyticsfalcon_21406:HG4_PB_SVrefine2Falcon1Dovetail_3720:HG4_Ill_scalpel_5931:HG4_Ill_manta_1542:HG4_Ill_GATKHCSBGrefine_4363:HG4_10X_allpass_1193:HG3_PB_assemblyticsfalcon_21853:HG3_PB_SVrefine2Falcon1Dovetail_3822:HG3_Ill_scalpel_6146:HG3_Ill_GATKHCSBGrefine_4163:HG3_10X_allpass_1264:HG2_PB_pbsv_6137:HG2_PB_SVrefine2PBcRplusDovetail_9104:HG2_PB_SVrefine2PB10Xhap12_4478:HG2_PB_SVrefine2Falcon1plusDovetail_9761:HG2_Ill_scalpel_6042:HG2_Ill_manta_1770:HG2_Ill_breakscan11_905:HG2_Ill_GATKHCSBGrefine_4288:HG2_10X_allpass_1030:HG4_Ill_MetaSV_4263:HG3_Ill_Spiral_6769:HG3_Ill_MetaSV_4283:HG2_Ill_tnscope_720;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_1030:HG2_Ill_GATKHCSBGrefine_4288:HG2_Ill_breakscan11_905:HG2_Ill_manta_1770:HG2_Ill_scalpel_6042:HG2_PB_SVrefine2Falcon1plusDovetail_9761:HG2_PB_SVrefine2PB10Xhap12_4478:HG2_PB_SVrefine2PBcRplusDovetail_9104:HG2_PB_pbsv_6137:HG3_10X_allpass_1264:HG3_Ill_GATKHCSBGrefine_4163:HG3_Ill_scalpel_6146:HG3_PB_SVrefine2Falcon1Dovetail_3822:HG3_PB_assemblyticsfalcon_21853:HG4_10X_allpass_1193:HG4_Ill_GATKHCSBGrefine_4363:HG4_Ill_manta_1542:HG4_Ill_scalpel_5931:HG4_PB_SVrefine2Falcon1Dovetail_3720:HG4_PB_assemblyticsfalcon_21406:HG4_PB_pbsv_6158;NumExactMatchSVs=21;ClusterMaxShiftDist=0.397373;ClusterMaxSizeDiff=0.397373;ClusterMaxEditDist=0.397373;PBcalls=14;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=4402;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:126942333-126942673;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:29:0|1:41:1:2:27:./.:0:0:0:0:0/1:28:18:0/1:30:8:.:.:.
chr5	127172330	HG4_PB_SVrefine2Falcon1Dovetail_3722	GCAGGCTCAACACCATGTGTAAGCCACCAAGGCTTGGGGATAGGACCCACTGAAGCAATGGCCTTAGCTGTATGTTGGCCCCTTTTAGCTACTTTTGGGATGCAGGGCACCAAGTCCCAAGGCTGCATAGAGCAGCAGAGGGCCCCTGGACCAGGCCCACAAAACCAGTTTTCCCTCCTAGGCCTTGGGTCTGTGATGGCAGGGGCTGCTATGAAGGTCTCTGACATGCCCTGGAGACATTTTCCCCATTGCCTTGGTAATTAACATTTGGCTTCTTGTTACTTATGCAACTTTCTGCAACTTATTAAATTCCTCCTCAGAAAGTGGGCTTTTCTTTTCTACTATATGGTCATGCTGCAAATATTCTAAACCTTTATACTCTGCTTTCCTTTTAAACATAAGTTCCAATTTCAGATCATCTCTCTCAAGTTGAAAGTTCCACAGATCTCTAGGACAGGGGTAAAATGCCACCAGTCTCTTTGCTAAGCATAACAAGAGTACATTTGTTTCATTTCCCATTGCCTCTACATTTTTGGGTATCTTTATCATAGTACACTACTCTCTGAGATACCAAATTACTGTATTAGTCCTTTTTCACACTGCTATAAACACATACACAAGACTGGATAACTTATAAAGAAAACAGGTTTAATTGACTCACAGTTCTACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGTGGAAGAGGAAGCAGGCACATCTTATATAGTGGCAGGTGAGAGAGAAGTGCAAGCAGGGTAAATGCCAGATGTTTGTAAAACCATCAGATGTTGTGAGAACTCACTCACTATCATAAGAATAGCATGGAGGAAACGACTCCCATGATCCAGTCACCTCCCACTAGGTCTCTCCCTCAACACCTGGGGATTATGATTCAATATGAGATTTAGTGGGGACAAAAAGCCTAACCATATCAGAATGTAAA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_906:HG2_PB_assemblyticsPBcR_21195:HG4_PB_assemblyticsfalcon_21412:HG3_PB_assemblyticsfalcon_21860:HG2_PB_assemblyticsfalcon_21935:HG3_PB_pbsv_5967:HG3_Ill_Krunchall_8602:HG4_PB_pbsv_6160:HG4_PB_SVrefine2PBcRDovetail_3071:HG4_PB_SVrefine2Falcon1Dovetail_3722:HG4_Ill_manta_1544:HG4_Ill_SVrefine2DISCOVARDovetail_4549:HG4_Ill_MetaSV_4264:HG4_Ill_GATKHCSBGrefine_4365:HG4_10X_allpass_1194:HG3_PB_SVrefine2PBcRDovetail_2838:HG3_PB_SVrefine2Falcon1Dovetail_3824:HG3_Ill_manta_1466:HG3_Ill_SVrefine2DISCOVARDovetail_4642:HG3_Ill_MetaSV_4284:HG3_Ill_GATKHCSBGrefine_4165:HG3_10X_allpass_1265:HG2_PB_pbsv_6139:HG2_PB_SVrefine2PBcRplusDovetail_9105:HG2_PB_SVrefine2PB10Xhap12_4480:HG2_PB_SVrefine2Falcon2Bionano_3063:HG2_PB_SVrefine2Falcon1plusDovetail_9763:HG2_Ill_manta_1772:HG2_Ill_SpiralSDKrefine_13944:HG2_Ill_SVrefine2DISCOVARplusDovetail_10624:HG2_Ill_MetaSV_4105:HG2_Ill_GATKHCSBGrefine_4290:HG2_10X_allpass_1031;NumClusterSVs=33;ExactMatchIDs=HG2_10X_allpass_1031:HG2_Ill_GATKHCSBGrefine_4290:HG2_Ill_MetaSV_4105:HG2_Ill_SVrefine2DISCOVARplusDovetail_10624:HG2_Ill_SpiralSDKrefine_13944:HG2_Ill_manta_1772:HG2_PB_SVrefine2Falcon1plusDovetail_9763:HG2_PB_SVrefine2Falcon2Bionano_3063:HG2_PB_SVrefine2PB10Xhap12_4480:HG2_PB_SVrefine2PBcRplusDovetail_9105:HG2_PB_pbsv_6139:HG3_10X_allpass_1265:HG3_Ill_GATKHCSBGrefine_4165:HG3_Ill_MetaSV_4284:HG3_Ill_SVrefine2DISCOVARDovetail_4642:HG3_Ill_manta_1466:HG3_PB_SVrefine2Falcon1Dovetail_3824:HG3_PB_SVrefine2PBcRDovetail_2838:HG4_10X_allpass_1194:HG4_Ill_GATKHCSBGrefine_4365:HG4_Ill_MetaSV_4264:HG4_Ill_SVrefine2DISCOVARDovetail_4549:HG4_Ill_manta_1544:HG4_PB_SVrefine2Falcon1Dovetail_3722:HG4_PB_SVrefine2PBcRDovetail_3071:HG4_PB_pbsv_6160;NumExactMatchSVs=26;ClusterMaxShiftDist=0.00210416;ClusterMaxSizeDiff=0.00210416;ClusterMaxEditDist=0.00210526;PBcalls=15;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-950;DistBack=38846;DistForward=17340;DistMin=17340;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:127172331-127173282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3249.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:69:1/1:1:16:0:24:./.:0:0:0:0:1/1:0:38:./.:5:64:.:.:.
chr5	127407439	HG2_PB_SVrefine2Falcon1plusDovetail_9764	GCTGGAGGGCAGTGGCATGATCTTGGCTCACTAAAATCTCAAAATCTCTGCCTCCTGGGCTCAATGAATTCTCCCACCTCAGCCTCCCAAATAGCTGAGACAACAGGCGTGTGCCACCATGCACGGCTAATTTTTGTATTTTTTGCAGAGATGGGTTTTCACCCTGTTGCGCAGGCTGGTCTCGAACGCCTGAGCTCAAGAGATCCTGCCACCTCAGCCTCCCAAAGTGCTACGATTACAGGCGTGAGACACCAAGTGATAAGGTTTGACAAATCTCATCTTGAATTGTAGCTCCCATAACTCCCCCATGTTATGGGAGGGACACGGTGGAAGATAATTGAATCATGGGGGCAGTTTCCCCTGTACTGTTCCCGTTAGTGAATAAGTCTTACGAGATCTGATGGGTTTATAAGTGGAAACACCTTTCACTTGGCTCTTATTCTCTTGTTTGCCACCATGTAAGACATAGCTTTTGCCTTCTTCCATTATTGTGAGGCCTCCCCAGCCACGTGGAACTGTGAGTCCATTCAACCTCTTTTTATTTATAAATTACCCAGTCTCAGGTATATCTTTATCAGCAGTGTGAAAATGAACTGATACACCATGCCTGGCCAAAACCAAAATCTTCTTAACTCATGTTCCACATTTAAATATATGGTAGCAGTGGTGAAGGAGAGTGAAGAGAAGTTTTGAATTGTTATAGTATACATGCACACACAGGTTCACACGCACACACAAACCATTTTGTAAGGGGAACATTTATTTTAAATCTTAGCCATGTGTTAATTTTCACTTAATATTTGTAGGAACATTTTCAGTTACATGTTCAACATAATACCATTTTAATACTAGTATTAAAAATGTTTTATAACCCTTTATAACACAGGAAAACACAGGTTTCTACCAATGGGCAGAACTTGTCATCATGGGGGATTCCAGTAAAAGACTATTTCCCAATCTGCTACGTACAGCCGACTGCCTAAATTTGGACCAATGGATTTGGTGTGTGTGTGTATGGTAGGAAGTTGTTTTCTCCTCTCTAGGTTTTCCTTCTCACTGACGAGATAATAGCAACAAATAAAGGCTCCCATCTTTAATTCAGATGAAGAAGCCTCCTGATGAGAAGGACAGAGCTGCCTGGCCAGCTTCAGACAGGTCATTTCTAGATTGCTGTCTGAGTAGAACAGAAATGTCTGTTATTTCAGCACTGAAATTTGAAGATATTGTTATAGAAAATTTTAACACAAAAGTCTAAATATTCAGTTAAATTATTTGTAGGAAATAGTTCAATCAATGTCATTAGTCAAGGCAAAAATCTTTGTCATAAGAATTAGGGGATAAAAACAAAATCTTAAAAATATGTACACATGAATTTTTATGTATATGCTCATGTGACATTAAAGGTCTCTCCAGGCATTACATCAGCAGTCCCCAACCTTTTTGGCACCAGGGACCATTTTCTTCCATGGATTGGGGTGGTGAAGGTGGATGACTTTGGGATGATACAAGAACACTACATTTATTGTGCACTTTATTTCTATTATTACTACATTGTAATATATAGTGAAATAATTATACAACTCACCACAACATAGAATCAGTGGGAGCCCTGAACTTGTTTTTCTGCAACTAGATGGTCCCAGCTGGGGGTGTTGGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGAGCACGCAACCTAGATGCTTCACAGGCACAGTTCACAATAGGGTTCATGCTCCTATAAGAATCTAATGCCACTGCTGATCTGACAGGAGATGGAGCTCAGGCAGTAATGCGAGTGATGGGGAGTGGCTGCAAATACAGATGAAGCTTCTCTTGCTTGCCCACTGCTCATCTCCCGCTGTGCAGCCTGGTTCCTAATGGTACCATTCTGTGGCCCAGGGGTTGGGGACTCCTGCATTACATCAAAGTAAAAATCACACACACACAAAGACCAAGATACTTACAGTAATAAATTTTCTAAATAGTTGAATGTCAACACTATGATAAACAAAATTGCAATGCAACTAACTGGAGAAAACCAATTTAGTTTAGGGTTTTTGTCCATAATACATGAAAAAGCTCTTAAAATGGGTAAAATGACAAAGAACATTGTATTAATAGATTTTTGGTTGCAAGCCACAGAAACCAAGACTCTGGTTAACTTAGATGAAGTGAATTACTGTAAGAGTATGGGAAAGTTAAATGAAAGAAGAAACAGATGCAGAAAGGACAACGGAAGTAGTTCCAGAGGGTGCTGCTGGCAGGAACTACCATACTGTCTTCCCTGAGTACTGCCACTGGAATGGACAGTTCCTTAGAAACAGACTGAGGTGGCATAGAGATGGCATAGAGAAAGCATAGAGAAATGGCATAGAGGAAGTTTGATTGAGAGTATACTCAGGAGACACAACTATAAGGAAATGAGGAAGGCAGGATTGGGCAGAGGAAGCAGCAGACTCACAGTGAGGATGCAGCTGAAGCCTCAGTCCATCCTACAGGGTGTTCTTTGAGGTAGTGGCTCTTTAGATTGTCCCAAATACAGTCAATGCCCTTTATATTGACCATCAGCTAGTCAGTGGCCTTGGGTTGCCCTCAGGCAAGGCAGTTGCCCAGGGAGGGAGGAAGTGAGATATAAGCAACTAAGAGTCCCACAACTGGACTTACTTTTCTGACTTTGCATCACACCACCCAAAATTCAAAACACTTATGAGAGCCAGATTGGCACATTTGGTCATATGCTCACAATTTGGCTGGGGCAGGCAAGCTCCTCTATTATGTCCTTCCAAAACTACACACAGAGAGGTAATTCCAGTAAAAGAATTACCCCCACCTCACCAAAGAAACAAAACAAAACCCAAACAAAAACAACAAGAAAAATGTGTATGCTATTACCACAACAAGAGAGAATGGAAACCCCACTTCTAGGATACAGTAATGGTCTTCTATAGATATCAATGGGCAATTCAGAAATAAAAATATATAAATGATTAAGAAACTTTAAAAACTATAACCTCACTAGAAGTCAATGATCTGCAAATTAAACTTTTGTTGTTTTTTTTTTTTGCTAATCAGATTGACAAAGATTAAGAAAGATTTTACTCTGACTTTATAAGGGTGGTGGAAGGCAGAAATTCAAACACAATGTTGACAGAAGGATAAATTGATAATAACCTTTCTGAAAATCAATTTTGATATGTATGCCAAAAGTTTTAAAAATATACATACCCTGCTATTTCACTTCTAAGAATTTATCCTAAGGAAATACTCAATTAAGAAAGATATATGCACAAAGACATCCAATGTAGCACTGCTTGCTCTTATTTAAAAATGAAATAAACAGGGTTCAAAAATAGGTGATAGAGTCAGTAAATTATGATAAATCTACATGATGCAATATTATGAAGCCATTAGAAATCATGCAATTGCAAGATATCCATTTTCATATATAGAGAAATGTTCACATTA	G	20	PASS	ClusterIDs=HG4_Ill_MetaSV_4265:HG3_PB_HySA_9483:HG4_10X_allpass_1195:HG2_PB_HySA_11436:HG2_10X_allpass_1032:HG4_PB_assemblyticsfalcon_21414:HG3_PB_assemblyticsfalcon_21862:HG2_PB_assemblyticsPBcR_21197:HG3_10X_allpass_1266:HG4_Ill_Krunchall_9119:HG3_Ill_Krunchall_8604:HG2_Ill_tnscope_721:HG4_PB_pbsv_6161:HG4_PB_SVrefine2PBcRDovetail_3072:HG4_PB_SVrefine2Falcon1Dovetail_3723:HG4_Ill_SVrefine2DISCOVARDovetail_4550:HG4_Ill_GATKHCSBGrefine_4366:HG3_PB_SVrefine2PBcRDovetail_2839:HG3_PB_SVrefine2Falcon1Dovetail_3825:HG3_Ill_MetaSV_4285:HG2_PB_pbsv_6140:HG2_PB_SVrefine2PBcRplusDovetail_9106:HG2_PB_SVrefine2PB10Xhap12_4481:HG2_PB_SVrefine2Falcon1plusDovetail_9764:HG2_Ill_SpiralSDKrefine_13945:HG2_Ill_MetaSV_4106:HG3_PB_pbsv_5968;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_MetaSV_4106:HG2_Ill_SpiralSDKrefine_13945:HG2_PB_SVrefine2Falcon1plusDovetail_9764:HG2_PB_SVrefine2PB10Xhap12_4481:HG2_PB_SVrefine2PBcRplusDovetail_9106:HG2_PB_pbsv_6140:HG3_Ill_MetaSV_4285:HG3_PB_SVrefine2Falcon1Dovetail_3825:HG3_PB_SVrefine2PBcRDovetail_2839:HG4_Ill_GATKHCSBGrefine_4366:HG4_Ill_SVrefine2DISCOVARDovetail_4550:HG4_PB_SVrefine2Falcon1Dovetail_3723:HG4_PB_SVrefine2PBcRDovetail_3072:HG4_PB_pbsv_6161;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00803905;ClusterMaxSizeDiff=0.00803905;ClusterMaxEditDist=0.00803905;PBcalls=15;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-3477;DistBack=70510;DistForward=-3477;DistMin=-3477;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=5:127407440-127410920;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:41:0|1:48:1:0:25:./.:0:0:0:0:0/1:65:16:0/1:299:151:3527:.:.
chr5	128327791	HG3_Ill_150bpfermikitraw_8148	ACAATAGAGTAGGATATTGCCCTACGTGGGGTGGGGCAACAGAACCTTGGCCTTTGAGACCCACCTTTCCTTGACTAGAGGATCTCT	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8096:HG2_PB_HySA_11443:HG3_PB_HySA_9492:HG4_PB_pbsv_6162:HG4_PB_assemblyticsfalcon_21419:HG3_PB_assemblyticsfalcon_21868:HG3_PB_pbsv_5971:HG2_PB_pbsv_6142:HG4_PB_HySA_9149:HG2_PB_HySA_11442:HG4_PB_SVrefine2PBcRDovetail_3073:HG4_Ill_svaba_8006:HG4_Ill_SVrefine2DISCOVARDovetail_4551:HG4_Ill_GATKHCSBGrefine_4367:HG4_Ill_250bpfermikitraw_8697:HG4_Ill_150bpfermikitraw_8319:HG3_PB_SVrefine2PBcRDovetail_2842:HG3_Ill_svaba_8002:HG3_Ill_manta_1467:HG3_Ill_SVrefine2DISCOVARDovetail_4645:HG3_Ill_GATKHCSBGrefine_4173:HG3_Ill_250bpfermikitraw_8336:HG3_Ill_150bpfermikitraw_8148:HG2_PB_SVrefine2PBcRplusDovetail_9107:HG2_PB_SVrefine2PB10Xhap12_4482:HG2_PB_SVrefine2Falcon2Bionano_3064:HG2_PB_SVrefine2Falcon1plusDovetail_9765:HG2_Ill_svaba_7906:HG2_Ill_manta_1774:HG2_Ill_SpiralSDKrefine_13948:HG2_Ill_SVrefine2DISCOVARplusDovetail_10627:HG2_Ill_GATKHCSBGrefine_4291:HG2_Ill_250bpfermikitraw_8631;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8096:HG4_PB_SVrefine2PBcRDovetail_3073:HG4_Ill_svaba_8006:HG4_Ill_SVrefine2DISCOVARDovetail_4551:HG4_Ill_GATKHCSBGrefine_4367:HG4_Ill_250bpfermikitraw_8697:HG4_Ill_150bpfermikitraw_8319:HG3_PB_SVrefine2PBcRDovetail_2842:HG3_Ill_svaba_8002:HG3_Ill_manta_1467:HG3_Ill_SVrefine2DISCOVARDovetail_4645:HG3_Ill_GATKHCSBGrefine_4173:HG3_Ill_250bpfermikitraw_8336:HG3_Ill_150bpfermikitraw_8148:HG2_PB_SVrefine2PBcRplusDovetail_9107:HG2_PB_SVrefine2PB10Xhap12_4482:HG2_PB_SVrefine2Falcon2Bionano_3064:HG2_PB_SVrefine2Falcon1plusDovetail_9765:HG2_Ill_svaba_7906:HG2_Ill_manta_1774:HG2_Ill_SpiralSDKrefine_13948:HG2_Ill_SVrefine2DISCOVARplusDovetail_10627:HG2_Ill_GATKHCSBGrefine_4291:HG2_Ill_250bpfermikitraw_8631;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0229885;ClusterMaxSizeDiff=0.0229885;ClusterMaxEditDist=0.0232558;PBcalls=15;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-86;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=88;REFWIDENED=5:128327792-128327965;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:67:1/1:2:28:0:23:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr5	130804188	HG2_PB_SVrefine2PB10Xhap12_4487	ATTAAAAAATGAATACTTGAAGGATGTATGTACTGACCCTGAGATTACACTAAAAATGGGAGAACTTTTAGGTATTTAAGATGATCT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_458:HG3_PB_pbsv_5977:HG2_PB_assemblyticsfalcon_21955:HG2_PB_assemblyticsPBcR_21215:HG2_PB_PB10Xdip_23232:HG4_PB_pbsv_6170:HG3_Ill_Krunchall_8623:HG2_PB_pbsv_6148:HG2_PB_SVrefine2PB10Xhap12_4488:HG4_Ill_Spiral_517:HG4_Ill_svaba_8024:HG4_Ill_manta_1550:HG4_Ill_SVrefine2DISCOVARDovetail_4561:HG4_Ill_Krunchall_9143:HG4_Ill_GATKHC_10390:HG4_Ill_GATKHCSBGrefine_4375:HG4_Ill_Cortex_3000:HG4_Ill_250bpfermikitraw_8714:HG4_Ill_150bpfermikitraw_8336:HG4_CG_vcfBeta_4048:HG4_10X_allpass_1197:HG3_Ill_svaba_8017:HG3_Ill_manta_1470:HG3_Ill_SVrefine2DISCOVARDovetail_4655:HG3_Ill_Krunchall_8622:HG3_Ill_GATKHC_10268:HG3_Ill_GATKHCSBGrefine_4178:HG3_Ill_Cortex_3017:HG3_Ill_150bpfermikitraw_8161:HG3_CG_vcfBeta_3445:HG3_10X_allpass_1267:HG2_PB_SVrefine2PBcRplusDovetail_9110:HG2_PB_SVrefine2PB10Xhap12_4487:HG2_PB_SVrefine2Falcon2Bionano_3068:HG2_PB_SVrefine2Falcon1plusDovetail_9771:HG2_PB_HySA_11458:HG2_Ill_svaba_7923:HG2_Ill_manta_1776:HG2_Ill_breakscan11_907:HG2_Ill_SpiralSDKrefine_13961:HG2_Ill_SVrefine2DISCOVARplusDovetail_10632:HG2_Ill_Krunchall_8826:HG2_Ill_GATKHC_10291:HG2_Ill_GATKHCSBGrefine_4298:HG2_Ill_Cortex_7277:HG2_Ill_250bpfermikitraw_8648:HG2_Ill_150bpfermikitraw_8112:HG2_CG_vcfBeta_3606:HG2_10X_allpass_1033:HG3_Ill_Spiral_6788;NumClusterSVs=50;ExactMatchIDs=HG2_10X_allpass_1033:HG2_CG_vcfBeta_3606:HG2_Ill_150bpfermikitraw_8112:HG2_Ill_250bpfermikitraw_8648:HG2_Ill_Cortex_7277:HG2_Ill_GATKHCSBGrefine_4298:HG2_Ill_GATKHC_10291:HG2_Ill_Krunchall_8826:HG2_Ill_SVrefine2DISCOVARplusDovetail_10632:HG2_Ill_SpiralSDKrefine_13961:HG2_Ill_breakscan11_907:HG2_Ill_manta_1776:HG2_Ill_svaba_7923:HG2_PB_HySA_11458:HG2_PB_SVrefine2Falcon1plusDovetail_9771:HG2_PB_SVrefine2Falcon2Bionano_3068:HG2_PB_SVrefine2PB10Xhap12_4487:HG2_PB_SVrefine2PBcRplusDovetail_9110:HG3_10X_allpass_1267:HG3_CG_vcfBeta_3445:HG3_Ill_150bpfermikitraw_8161:HG3_Ill_Cortex_3017:HG3_Ill_GATKHCSBGrefine_4178:HG3_Ill_GATKHC_10268:HG3_Ill_Krunchall_8622:HG3_Ill_SVrefine2DISCOVARDovetail_4655:HG3_Ill_manta_1470:HG3_Ill_svaba_8017:HG4_10X_allpass_1197:HG4_CG_vcfBeta_4048:HG4_Ill_150bpfermikitraw_8336:HG4_Ill_250bpfermikitraw_8714:HG4_Ill_Cortex_3000:HG4_Ill_GATKHCSBGrefine_4375:HG4_Ill_GATKHC_10390:HG4_Ill_Krunchall_9143:HG4_Ill_SVrefine2DISCOVARDovetail_4561:HG4_Ill_manta_1550:HG4_Ill_svaba_8024;NumExactMatchSVs=39;ClusterMaxShiftDist=0.179641;ClusterMaxSizeDiff=0.179641;ClusterMaxEditDist=0.179641;PBcalls=12;Illcalls=32;TenXcalls=3;CGcalls=3;PBexactcalls=5;Illexactcalls=28;TenXexactcalls=3;CGexactcalls=3;HG2count=24;HG3count=13;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-86;DistBack=49581;DistForward=47463;DistMin=47463;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=5:130804189-130804282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:48:0|1:21:3:0:40:./.:0:0:0:0:0/1:30:15:./.:.:.:.:.:.
chr5	131120704	HG4_Ill_250bpfermikitraw_8715	TATATATGATATATATGACATATATATGATATATATGACTATATATATCATATATATGATATATATGACATATATATATGATATATATGACTATATATATATC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_6172:HG2_PB_assemblyticsPBcR_21217:HG2_PB_SVrefine2PBcRplusDovetail_9111:HG4_Ill_GATKHC_10393:HG4_Ill_GATKHCSBGrefine_4377:HG3_Ill_GATKHC_10270:HG3_Ill_GATKHCSBGrefine_4179:HG3_10X_allpass_1268:HG2_Ill_GATKHC_10294:HG2_Ill_GATKHCSBGrefine_4299:HG4_Ill_SVrefine2DISCOVARDovetail_4563:HG2_Ill_SpiralSDKrefine_13962:HG2_PB_HySA_11461:HG4_Ill_Krunchall_9144:HG2_PB_pbsv_6150:HG3_PB_pbsv_5979:HG4_Ill_svaba_8026:HG4_Ill_scalpel_5954:HG4_Ill_manta_1551:HG4_Ill_Krunchall_9145:HG4_Ill_250bpfermikitraw_8715:HG3_Ill_svaba_8018:HG3_Ill_scalpel_6166:HG3_Ill_manta_1471:HG3_Ill_Krunchall_8624:HG3_Ill_250bpfermikitraw_8350:HG2_Ill_svaba_7924:HG2_Ill_scalpel_6068:HG2_Ill_manta_1777:HG2_Ill_250bpfermikitraw_8650;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8650:HG2_Ill_manta_1777:HG2_Ill_scalpel_6068:HG2_Ill_svaba_7924:HG3_Ill_250bpfermikitraw_8350:HG3_Ill_Krunchall_8624:HG3_Ill_manta_1471:HG3_Ill_scalpel_6166:HG3_Ill_svaba_8018:HG4_Ill_250bpfermikitraw_8715:HG4_Ill_Krunchall_9145:HG4_Ill_manta_1551:HG4_Ill_scalpel_5954:HG4_Ill_svaba_8026;NumExactMatchSVs=14;ClusterMaxShiftDist=0.34188;ClusterMaxSizeDiff=0.34188;ClusterMaxEditDist=0.34188;PBcalls=6;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-102;DistBack=64462;DistForward=64242;DistMin=64242;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=5:131120703-131120813;PctSeqSimilarity=0.9128;PctSizeSimilarity=0.887;PctRecOverlap=0.7328;SizeDiff=-13;StartDistance=-18;EndDistance=-31;GTMatch=0;TruScore=84;MatchId=3253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:./.:29:12:0:21:./.:0:0:0:0:0/1:34:10:./.:.:.:.:.:.
chr5	131185049	HG4_PB_SVrefine2PBcRDovetail_3078	GAACCTCTTTTCTTTATATATATAAAGAAACCTCTTTTCTTTATATATATAAAGAAACCTCTTTTCTTTATATATATAAAGAAACCTCTTTTCTTTATATATATAAAGA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9772:HG3_PB_SVrefine2Falcon1Dovetail_3833:HG4_PB_HySA_9163:HG2_PB_pbsv_6151:HG3_PB_pbsv_5980:HG4_PB_pbsv_6173:HG4_PB_SVrefine2PBcRDovetail_3078:HG4_PB_SVrefine2Falcon1Dovetail_3728:HG3_PB_assemblyticsfalcon_21881:HG2_PB_SVrefine2PBcRplusDovetail_9112:HG2_PB_SVrefine2PB10Xhap12_4490:HG2_PB_SVrefine2Falcon2Bionano_3069;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9772:HG4_PB_SVrefine2PBcRDovetail_3078:HG4_PB_SVrefine2Falcon1Dovetail_3728:HG3_PB_assemblyticsfalcon_21881:HG2_PB_SVrefine2PBcRplusDovetail_9112:HG2_PB_SVrefine2PB10Xhap12_4490:HG2_PB_SVrefine2Falcon2Bionano_3069;NumExactMatchSVs=7;ClusterMaxShiftDist=0.114537;ClusterMaxSizeDiff=0.114537;ClusterMaxEditDist=0.114537;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-108;DistBack=-1;DistForward=-108;DistMin=-108;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=179;REFWIDENED=5:131185050-131185336;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3254.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:1|0:6:29:17:0:./.:0:0:0:0:0/1:8:3:./.:.:.:.:.:.
chr5	132657941	HG4_Ill_GATKHCSBGrefine_4378	CCACCCACACCCACCCACACCCACACACCCACACACACACACACCCCCACACA	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10638:HG4_PB_HySA_9169:HG4_Ill_svaba_8039:HG4_Ill_scalpel_5958:HG4_Ill_manta_1552:HG4_Ill_Krunchall_9152:HG4_Ill_GATKHC_10400:HG4_Ill_GATKHCSBGrefine_4378:HG4_Ill_250bpfermikitraw_8725:HG4_Ill_150bpfermikitraw_8346:HG3_Ill_svaba_8030:HG3_Ill_scalpel_6172:HG3_Ill_manta_1472:HG3_Ill_Krunchall_8631:HG3_Ill_GATKHC_10277:HG3_Ill_GATKHCSBGrefine_4180:HG3_Ill_250bpfermikitraw_8359:HG2_Ill_svaba_7935:HG2_Ill_scalpel_6076:HG2_Ill_manta_1778:HG2_Ill_SpiralSDKrefine_13969:HG2_Ill_Krunchall_8833:HG2_Ill_GATKHC_10302:HG2_Ill_GATKHCSBGrefine_4300:HG2_Ill_250bpfermikitraw_8660:HG2_Ill_150bpfermikitraw_8125:HG4_PB_pbsv_6175:HG4_PB_SVrefine2PBcRDovetail_3079:HG4_Ill_SVrefine2DISCOVARDovetail_4567:HG3_Ill_SVrefine2DISCOVARDovetail_4659;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8125:HG2_Ill_250bpfermikitraw_8660:HG2_Ill_GATKHCSBGrefine_4300:HG2_Ill_GATKHC_10302:HG2_Ill_Krunchall_8833:HG2_Ill_SpiralSDKrefine_13969:HG2_Ill_manta_1778:HG2_Ill_scalpel_6076:HG2_Ill_svaba_7935:HG3_Ill_250bpfermikitraw_8359:HG3_Ill_GATKHCSBGrefine_4180:HG3_Ill_GATKHC_10277:HG3_Ill_Krunchall_8631:HG3_Ill_manta_1472:HG3_Ill_scalpel_6172:HG3_Ill_svaba_8030:HG4_Ill_150bpfermikitraw_8346:HG4_Ill_250bpfermikitraw_8725:HG4_Ill_GATKHCSBGrefine_4378:HG4_Ill_GATKHC_10400:HG4_Ill_Krunchall_9152:HG4_Ill_manta_1552:HG4_Ill_scalpel_5958:HG4_Ill_svaba_8039;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0952381;PBcalls=3;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=-52;DistBack=100357;DistForward=27626;DistMin=27626;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=70;REFWIDENED=5:132657905-132658026;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3255.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:33:0|1:40:3:2:29:./.:0:0:0:0:0/1:13:12:./.:.:.:.:.:.
chr5	133134687	HG2_PB_SVrefine2Falcon1plusDovetail_9774	GGGAGAGAGAGGGGAAGGGAAGGAATTAGAGGGGAGGAGAGAGGGAGGAAGGTAGAGAGGAAAGGAGGTGGGGAGGAAAGGAAAGAAGGAGGGAAGACAGGGAGAAAGAATCTAGCCAGCCACCCCTGACTGGCGAGACACCAGCTTCCCTGGGTTCCACGTGCCCCTCTTCCCCTGGGCATGTAAGCTAATGTTCACAGGTCTTCTAACACTGGGATCTTCCCAGCACCCCGTGGGCACCAGGCCCAGAGATGAAACCTAGTGGGGGAGTCAACACCAGGGGTGAGCCATCCCTGCAGACCTTTCTGGTCTGGCACTCTGAAAATGGCCCACTGTGACCAGCACCCATTCAAGCTAGTTTCAGCAGAAAAGAACTTATGAGGTCACTAAAGCATCCCACGGTGCTCAGAGACTCAGGAAAATTCTAGAACTGAAGATGGGTTAAGCCACAGACACTGCTTCTCATCTCCATACCTCCGAGCTCCTGACAGGTGAGCCACTCTGCCCTTCCAGAAGTCCACCTGTCTGCAACCCCACGCTAGGTACAGGGCTCTGAGGCAGGCCCTGGGAGCCCACTCAGACTCAGAGACATGGGGTACCTGTGGCTGGCAGCCACAACGTCTCTCCTCCTACCCTGCCCCCAGCAGGAGATGGTTGTGTGCTATCTGCAAATTCTTACCCATCTCATCTCTCTCCCAGGCTGCAGCTGGTAACGCCTCCCCCTCCTGGCCCAGCTTGCCTAGCTGCCCTCACCTTGACAACCACAGAAAAGCCAAAGACTGCACACATGTGCACCACACTATTTATCCTCCTGCCTGTGTTTGCTACAGTAGCCCCACAAAAAACATAACAAGGCCACAACAGAGATGCGACACGTGCCATGTACCAACTCCCCACACTTCTCAAGGAGGAAAGGCACCTGGTGATGTTCTGCAGTTCATCCCCTGCAGCACCTGAGCACCCTTCTCTCTCAGCATACATCCCTGCCTGCTGGAGGAAAGCCAGGGACCTGCACGAAACATCAGCACGCGGCGTCCCAGCCCATGCAGTTGTCATGGACAACAGGAGTTCAGAGGAAAGTGTGGGGCATGTAGACCATATGGGCTGCAGGAATTCAGGTAGCTATCAGAGTCCAGGATGATTTAGGGAAAGGAGTTTACAAAACAGGCTTATTTTGGAAAGGTTGGTGCTGAGAAGCAGTCCTTCCAAATATTGGGGGGCAGTCAAAGCAAGGGCAAAGAGATGCAGATGGGATAGAGACAGTACTCAGGGAGGGGACAGGGAGGAACCACCTTCCTGGCCAAGGCTGGTGAGGCAGTCTTGCACCAAGGTTTAGGGCAGGGGTATCCAATCTTTTGGCTTCCATAGGCGACATTGGAAGAAGAAAAATTGTCTTGGGCCACACATAAAACACACTAACACTAACGATAGCTGATGAGCTTTAAAAAAGGTCGGTGCATAAATGTCATAATGTTTTGAGAAAGTTTATGAATTTGTGTTGGGCTGCATTCAAAGCCATCCTGGGCCACAGGTTGGACAAGCTTTGCTTAAGGGGAACAGGGACCAACCGCTTCCTCCTCCCACTGCCCTGCAAGCTGGCATTTTCTCCTTCCCCTCCCCCTGCAAATGACCAACTTTCTCAAAATAACTACTTCGCAGCCCTTTCTTGAGGGGCTTTTAATGGCTTTTGAAATATAAGCCCGGAGCTACAAATGCTGCCTGGCCAATTTACTCGAATGCTTCACCTCCCCAGACATTTTTTCTAAAATGACTTTCCTTCTTCCACCACAAACAGAGCCTTT	G	20	PASS	ClusterIDs=HG3_PB_pbsv_5983:HG2_PB_pbsv_6154:HG2_PB_SVrefine2PB10Xhap12_4493:HG4_PB_HySA_9173:HG3_PB_HySA_9514:HG4_PB_SVrefine2PBcRDovetail_3083:HG3_PB_SVrefine2PBcRDovetail_2845:HG2_PB_SVrefine2PBcRplusDovetail_9114:HG2_PB_SVrefine2Falcon2Bionano_3072:HG2_PB_SVrefine2Falcon1plusDovetail_9774:HG2_Ill_tnscope_722:HG2_PB_HySA_11475:HG2_10X_allpass_1034:HG4_Ill_MetaSV_4271:HG2_Ill_MetaSV_4108:HG4_10X_allpass_1199:HG3_10X_allpass_1270:HG4_PB_pbsv_6181;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9774:HG2_PB_SVrefine2Falcon2Bionano_3072:HG2_PB_SVrefine2PBcRplusDovetail_9114:HG3_PB_SVrefine2PBcRDovetail_2845:HG4_PB_SVrefine2PBcRDovetail_3083;NumExactMatchSVs=5;ClusterMaxShiftDist=0.00942612;ClusterMaxSizeDiff=0.00942612;ClusterMaxEditDist=0.0244241;PBcalls=12;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-1801;DistBack=-28;DistForward=-1708;DistMin=-1708;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=5:133134688-133136492;PctSeqSimilarity=0.9994;PctSizeSimilarity=0.9989;PctRecOverlap=0.9989;SizeDiff=-2;StartDistance=2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3256.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:50:./.:15:17:20:15:./.:0:0:0:0:0/1:46:9:0/1:116:56:1695:.:.
chr5	136852660	HG4_Ill_GATKHCSBGrefine_4387	GAGGAGGGGCAGGGATGATGAGAGGCGAGTTCAGGAGAGGCATAGATGATGGAGGCGAGTTCAGGAGAGTCAGGGATGATGAGAGGCAAGCTC	G	20	PASS	ClusterIDs=HG2_Ill_GATKHC_10331:HG4_PB_pbsv_6196:HG3_PB_pbsv_6001:HG4_Ill_svaba_8060:HG4_Ill_scalpel_5971:HG4_Ill_GATKHC_10424:HG4_Ill_GATKHCSBGrefine_4387:HG3_Ill_svaba_8048:HG3_Ill_scalpel_6189:HG3_Ill_GATKHCSBGrefine_4243:HG2_PB_pbsv_6171:HG2_Ill_svaba_7954:HG2_Ill_scalpel_6090;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHC_10331:HG4_Ill_svaba_8060:HG4_Ill_scalpel_5971:HG4_Ill_GATKHC_10424:HG4_Ill_GATKHCSBGrefine_4387:HG3_Ill_svaba_8048:HG3_Ill_scalpel_6189:HG3_Ill_GATKHCSBGrefine_4243:HG2_PB_pbsv_6171:HG2_Ill_svaba_7954:HG2_Ill_scalpel_6090;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0108108;ClusterMaxSizeDiff=0.0108108;ClusterMaxEditDist=0.0108696;PBcalls=3;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-92;DistBack=396;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=5:136852659-136852772;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3257.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:14:./.:13:3:3:8:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr5	136854637	HG2_PB_SVrefine2PBcRplusDovetail_9127	GTGGCATGATCTCGGCTCACTCTAACCTCCGCCTCCCAGGTTCAAGCAATTCTCGTGCCTCAGCCCCCCAAGTAGCTGGGATTACAGGCCTGTGCCACCACGCCCAGCTAATTTTTTGTATTTTTCATAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCTGACCTCAAGTGAGCTGCCCACCTTGGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCACTGCGCCCAGCCCAAACAAAAAGGAAATTCTGACACAGGCTATGACATGGATGAACGCTGAGGACATTATGCTGAGTGAAATAAGCCAGTGAAATAAGGACAAATTCCACTCCCAATAGGTACCTAAAGTAGCCAGATTCATAGAGACAGAAAGTAAGATGGTAGTTGCCAGGGAGCTAGGGGAGAGGAAGAAAGGATGAGTTAATGTTTCATGGGCATCCAATTTTGGGTTTGCAAGATAAGAAAGTATGGTAGGTGAATGGTGGTGATGGCTGCACAACAATATAAATATACTTAATCCCACTGAACTATACCTTAAAAGTGGTTAAGATGGTACATATTTTATTATATGTATTTTACCACAAACAATTGCTTAAGTCATCACCAACCTCCCCTCACCACAAAAAAAAATAGAGCCATTGTCCTGTGGAAGAGGGGTAAGCCGTCCTAACATCTATTGTTAACAGTCCCAGAAATGGCCGGGGCATTTGGGTGGGGGAAGGTTGAGCAGGGTAAAGACCTTGGCTTCCTTCTGACTGCTTAGGTATCTCAAAGAGAAACTGTAACAAAGAGTGCTAATATATGGTGTGTTGTTTAAGTGTCTATTAGAAGAACAAATGACGGGTTCTATTCCAATTTAATGAGGCAGAGATCATCAAACACACATTCCAGGCTATAAAACATCCCTTCTCATTGCAAACTCCCCAGGGGAGGTTGCAGAATAGATGGGAGTTAATATCTGAAGATTAAATAACACGATAACAGATTCGGTATGTTTGACCTACTTTTTGAGAAACTAACAAAGACTGTTTTTACTCCTCACCTCGTAATAAACAGCCTAATAGGTCACTGTTAAGTCCACTATCATGAGGATGGTGGTAAGCGGGAAGATAAACATGTGTGCACCCATTTATTACAAGGACCAGGTGGAATGTGGAGTCTCAAAAGCAGCTGAACACCCCCAAAGCAGGCTGGCAAGGACCCCAGTGTGTTCTGTGGTTCTCCCTCCAGGCCACAGGAGGGGAGGAAATGGCTTCCTGTTTTACCATCCCTCAACTCATAAAAAGAGCCAGAAGTCCCCCCAACACACACATCTTGCTTCCCTTGGGCCTAAAAAGAGTGTATATAAGGATGAATTCCATGCTCAAAATATTTGAAGTCTGTGAGGCCTCTCAAGGGCACCTCATCCATGTATAGATAGGCAAATTCATTCCAAAGCTGACTGACCCAAGATCAAACAGACAACATGTGGGAAAGAGCCAGTTCCTTAGACTACCTGTGTGGACTTGGGAAACGGAAGGAAATGAGAAAAGGAAAGGGGTCTCCACATTTCTCATCAAAAGGAATAAGAGACTGTCGGTCCCCTCCGGCACAAGGTCACTGAGGCCTCTGAATCTTAGTGTTTGCATGTAAAATTGGAATAATAGTTACTTCACAGAGGTTCTTCCTTTTTTTGAGATGGAGTCTTGCTTTGTCACCCAGGT	G	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4292:HG4_10X_allpass_1201:HG3_10X_allpass_1272:HG2_10X_allpass_1037:HG2_PB_assemblyticsfalcon_21998:HG4_PB_assemblyticsfalcon_21469:HG3_PB_assemblyticsfalcon_21918:HG2_PB_assemblyticsPBcR_21262:HG2_PB_HySA_11508:HG2_PB_pbsv_6172:HG3_PB_pbsv_6002:HG4_Ill_MetaSV_4275:HG4_Ill_GATKHCSBGrefine_4388:HG3_Ill_GATKHCSBGrefine_4244:HG2_Ill_MetaSV_4115:HG2_Ill_GATKHCSBGrefine_4308:HG2_PB_HySA_11507:HG4_PB_pbsv_6197:HG2_Ill_tnscope_724:HG4_PB_SVrefine2Falcon1Dovetail_3744:HG4_Ill_SVrefine2DISCOVARDovetail_4587:HG3_PB_SVrefine2PBcRDovetail_2857:HG3_PB_SVrefine2Falcon1Dovetail_3849:HG3_Ill_SVrefine2DISCOVARDovetail_4679:HG2_PB_SVrefine2PBcRplusDovetail_9127:HG2_PB_SVrefine2PB10Xhap12_4510:HG2_PB_SVrefine2Falcon2Bionano_3085:HG2_PB_SVrefine2Falcon1plusDovetail_9789:HG2_Ill_SVrefine2DISCOVARplusDovetail_10659;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10659:HG2_PB_SVrefine2Falcon1plusDovetail_9789:HG2_PB_SVrefine2Falcon2Bionano_3085:HG2_PB_SVrefine2PB10Xhap12_4510:HG2_PB_SVrefine2PBcRplusDovetail_9127:HG3_Ill_SVrefine2DISCOVARDovetail_4679:HG3_PB_SVrefine2Falcon1Dovetail_3849:HG3_PB_SVrefine2PBcRDovetail_2857:HG4_Ill_SVrefine2DISCOVARDovetail_4587:HG4_PB_SVrefine2Falcon1Dovetail_3744;NumExactMatchSVs=10;ClusterMaxShiftDist=0.168062;ClusterMaxSizeDiff=0.168062;ClusterMaxEditDist=0.168062;PBcalls=16;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-1716;DistBack=401;DistForward=16963;DistMin=401;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=88;REFWIDENED=5:136854638-136856441;PctSeqSimilarity=0.9716;PctSizeSimilarity=1;PctRecOverlap=0.9779;SizeDiff=0;StartDistance=-38;EndDistance=-38;GTMatch=0;TruScore=98;MatchId=3258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:1:18:0:19:./.:0:0:0:0:./.:1:5:./.:10:112:1699:.:.
chr5	137022562	HG3_Ill_MetaSV_4293	AAAAATATTACCTCCCTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCTGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCGCGGGGGGGGGTCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCTGGCTGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCGAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGGAAAAATTGAGAAATCGGATGGTTGCCAGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTTCGGAAGGCCGCAGGGACCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAAAAAATAAAATAAAATAAAATAAAATAAAAT	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_725:HG4_10X_allpass_1202:HG2_10X_allpass_1038:HG2_PB_pbsv_6174:HG3_10X_allpass_1273:HG2_PB_assemblyticsfalcon_22000:HG4_PB_assemblyticsfalcon_21472:HG4_Ill_Krunchall_9173:HG3_PB_assemblyticsfalcon_21920:HG4_PB_pbsv_6199:HG4_PB_SVrefine2Falcon1Dovetail_3746:HG4_PB_HySA_9197:HG4_Ill_SVrefine2DISCOVARDovetail_4588:HG4_Ill_MetaSV_4276:HG4_Ill_GATKHCSBGrefine_4389:HG3_PB_pbsv_6004:HG3_PB_SVrefine2PBcRDovetail_2860:HG3_PB_SVrefine2Falcon1Dovetail_3851:HG3_Ill_MetaSV_4293:HG3_Ill_GATKHCSBGrefine_4245:HG2_PB_SVrefine2PB10Xhap12_4512:HG2_PB_SVrefine2Falcon1plusDovetail_9791:HG2_Ill_breakscan11_910:HG2_Ill_MetaSV_4116:HG2_Ill_GATKHCSBGrefine_4309;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4309:HG2_Ill_MetaSV_4116:HG2_Ill_breakscan11_910:HG2_PB_SVrefine2Falcon1plusDovetail_9791:HG2_PB_SVrefine2PB10Xhap12_4512:HG3_Ill_GATKHCSBGrefine_4245:HG3_Ill_MetaSV_4293:HG3_PB_SVrefine2Falcon1Dovetail_3851:HG3_PB_SVrefine2PBcRDovetail_2860:HG3_PB_pbsv_6004:HG4_Ill_GATKHCSBGrefine_4389:HG4_Ill_MetaSV_4276:HG4_Ill_SVrefine2DISCOVARDovetail_4588:HG4_PB_HySA_9197:HG4_PB_SVrefine2Falcon1Dovetail_3746;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0235294;ClusterMaxSizeDiff=0.0235294;ClusterMaxEditDist=0.0235294;PBcalls=12;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-1324;DistBack=-1309;DistForward=-1310;DistMin=-1310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:137022563-137023902;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3259.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:51:0|1:31:1:0:40:./.:0:0:0:0:0/1:40:14:0/1:82:41:1331:.:.
chr5	137479296	HG4_Ill_Krunchall_9176	TGCTCTGTATCTAGCTAAAGGTTTGTAAACACACCAATCAGCACTCTGTAAAAACGCACCAATCAGC	T	20	PASS	ClusterIDs=HG2_PB_HySA_11511:HG4_PB_pbsv_6201:HG2_PB_assemblyticsPBcR_21266:HG2_PB_assemblyticsfalcon_22002:HG2_PB_HySA_11512:HG2_PB_pbsv_6175:HG4_Ill_svaba_8064:HG4_Ill_scalpel_5976:HG4_Ill_manta_1557:HG4_Ill_Krunchall_9176:HG4_Ill_GATKHC_10428:HG4_Ill_GATKHCSBGrefine_4390:HG4_Ill_250bpfermikitraw_8751:HG4_Ill_150bpfermikitraw_8368:HG4_10X_allpass_1203:HG3_Ill_svaba_8052:HG3_Ill_scalpel_6193:HG3_Ill_manta_1475:HG3_Ill_Krunchall_8658:HG3_Ill_GATKHC_10311:HG3_Ill_GATKHCSBGrefine_4246:HG3_Ill_250bpfermikitraw_8385:HG3_Ill_150bpfermikitraw_8199:HG2_Ill_svaba_7958:HG2_Ill_scalpel_6094:HG2_Ill_manta_1781:HG2_Ill_SpiralSDKrefine_13992:HG2_Ill_Krunchall_8859:HG2_Ill_GATKHC_10335:HG2_Ill_GATKHCSBGrefine_4310:HG2_Ill_250bpfermikitraw_8683:HG2_Ill_150bpfermikitraw_8148:HG3_PB_HySA_9550:HG3_PB_SVrefine2PBcRDovetail_2861:HG2_PB_SVrefine2PB10Xhap12_4514:HG3_PB_pbsv_6006;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8148:HG2_Ill_250bpfermikitraw_8683:HG2_Ill_GATKHCSBGrefine_4310:HG2_Ill_GATKHC_10335:HG2_Ill_Krunchall_8859:HG2_Ill_SpiralSDKrefine_13992:HG2_Ill_manta_1781:HG2_Ill_scalpel_6094:HG2_Ill_svaba_7958:HG3_Ill_150bpfermikitraw_8199:HG3_Ill_250bpfermikitraw_8385:HG3_Ill_GATKHCSBGrefine_4246:HG3_Ill_GATKHC_10311:HG3_Ill_Krunchall_8658:HG3_Ill_manta_1475:HG3_Ill_scalpel_6193:HG3_Ill_svaba_8052:HG4_10X_allpass_1203:HG4_Ill_150bpfermikitraw_8368:HG4_Ill_250bpfermikitraw_8751:HG4_Ill_GATKHCSBGrefine_4390:HG4_Ill_GATKHC_10428:HG4_Ill_Krunchall_9176:HG4_Ill_manta_1557:HG4_Ill_scalpel_5976:HG4_Ill_svaba_8064;NumExactMatchSVs=26;ClusterMaxShiftDist=0.128571;ClusterMaxSizeDiff=0.114286;ClusterMaxEditDist=0.283688;PBcalls=10;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-66;DistBack=19621;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=64;REFWIDENED=5:137479281-137479410;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:46:0|1:29:4:0:39:./.:0:0:0:0:0/1:36:23:./.:.:.:.:.:.
chr5	138108442	HG2_PB_SVrefine2PBcRplusDovetail_9130	CATAAATGAAAAGAGCACCAGAATTTCAGGACTAGAGGGATTTGGAGTATAGAATTCAACTTCTTTCATTTTATAG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10665:HG4_PB_pbsv_6205:HG2_PB_pbsv_6176:HG3_PB_pbsv_6007:HG4_Ill_250bpfermikitraw_8761:HG4_Ill_150bpfermikitraw_8379:HG3_Ill_250bpfermikitraw_8391:HG3_Ill_150bpfermikitraw_8203:HG2_Ill_250bpfermikitraw_8690:HG2_Ill_150bpfermikitraw_8154:HG4_PB_SVrefine2PBcRDovetail_3095:HG4_PB_SVrefine2Falcon1Dovetail_3748:HG4_Ill_SVrefine2DISCOVARDovetail_4593:HG3_PB_SVrefine2PBcRDovetail_2862:HG3_PB_SVrefine2Falcon1Dovetail_3853:HG3_Ill_SVrefine2DISCOVARDovetail_4687:HG2_PB_SVrefine2PBcRplusDovetail_9130:HG2_PB_SVrefine2PB10Xhap12_4515:HG2_PB_SVrefine2Falcon2Bionano_3087:HG2_PB_SVrefine2Falcon1plusDovetail_9792;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10665:HG4_PB_SVrefine2PBcRDovetail_3095:HG4_PB_SVrefine2Falcon1Dovetail_3748:HG4_Ill_SVrefine2DISCOVARDovetail_4593:HG3_PB_SVrefine2PBcRDovetail_2862:HG3_PB_SVrefine2Falcon1Dovetail_3853:HG3_Ill_SVrefine2DISCOVARDovetail_4687:HG2_PB_SVrefine2PBcRplusDovetail_9130:HG2_PB_SVrefine2PB10Xhap12_4515:HG2_PB_SVrefine2Falcon2Bionano_3087:HG2_PB_SVrefine2Falcon1plusDovetail_9792;NumExactMatchSVs=11;ClusterMaxShiftDist=0.027027;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.0540541;PBcalls=11;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-75;DistBack=17894;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=159;REFWIDENED=5:138108443-138108676;PctSeqSimilarity=0.9884;PctSizeSimilarity=1;PctRecOverlap=0.5263;SizeDiff=0;StartDistance=-36;EndDistance=-36;GTMatch=0;TruScore=83;MatchId=3261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:38:./.:0:4:0:15:./.:0:0:0:0:0/1:15:34:./.:.:.:.:.:.
chr5	140141373	HG2_PB_SVrefine2PBcRplusDovetail_9132	CTCCCAAAGTCCTGGGATTACAGGCATGAGCCACCATGCCCCACTCAGGCTGGTCTTAAACTGCTGGGCTCAAGCAATCCTCCTTTCTGGGTT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10669:HG4_PB_pbsv_6210:HG2_PB_HySA_11519:HG4_PB_HySA_9210:HG2_PB_pbsv_6179:HG4_Ill_SVrefine2DISCOVARDovetail_4597:HG4_Ill_GATKHCSBGrefine_4398:HG4_Ill_250bpfermikitraw_8767:HG4_Ill_150bpfermikitraw_8385:HG2_Ill_GATKHCSBGrefine_4313:HG2_Ill_250bpfermikitraw_8697:HG4_PB_SVrefine2PBcRDovetail_3098:HG4_PB_SVrefine2Falcon1Dovetail_3751:HG3_PB_SVrefine2Falcon1Dovetail_3856:HG2_PB_SVrefine2PBcRplusDovetail_9132:HG2_PB_SVrefine2Falcon1plusDovetail_9796;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10669:HG4_PB_SVrefine2PBcRDovetail_3098:HG4_PB_SVrefine2Falcon1Dovetail_3751:HG3_PB_SVrefine2Falcon1Dovetail_3856:HG2_PB_SVrefine2PBcRplusDovetail_9132:HG2_PB_SVrefine2Falcon1plusDovetail_9796;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0324324;ClusterMaxSizeDiff=0.0324324;ClusterMaxEditDist=0.0978261;PBcalls=9;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-92;DistBack=105276;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=132;REFWIDENED=5:140141374-140141597;PctSeqSimilarity=0.9615;PctSizeSimilarity=1;PctRecOverlap=0.7097;SizeDiff=0;StartDistance=-27;EndDistance=-27;GTMatch=0;TruScore=89;MatchId=3262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:23:0|1:32:7:4:15:./.:0:0:0:0:0/1:56:26:./.:.:.:.:.:.
chr5	140222138	HG2_PB_SVrefine2PBcRplusDovetail_9133	GCGCCCTGGACCGCGAGAGAGTGTCGGCCTATGAGTTGGTGGTAACCGCGCGGGACGGGGGCTCGCCTTCGCTGTGGGCCACCGCCAGCTTGTCTGTGGAGGTGGCCGACGTGAACGACAATGCTCCGGCGTTCGCGCAGCCCGAGTACACGGTGTTCGTGAAGGAGAACAACCCGCCGGGCTGCCACATCTTCACGGTGTCTGCGCGAGACGCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTTGTGGAGCGGCGGGTGGGCGAGCGCTCGCTGTCGAGCTACATTTCGGTGCACACGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGCTGGACCACGAGGAGCTAGAGCTGCTGCAGTTCCAGGTGAGCGCGCGCGACGCGGGCGTGCCGCCTCTGGGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAATGACAACGCGCCGGCACTGCTGGAGCCTCGGGTGGGTGGCACTGGTGGCGCAGCGAGCAAGCTGGTGCCGCGGTCTGTGGGCGCGGGCCACGTGGTAGCGAAGGTGCGCGCAGTGGACGCCGACTCGGGCTACAACGCGTGGCTTTCGTATGAGCTGCAGCCAGCTGCAAGCAGCCCTCGCATCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATCAGCACCACTCGTGTCCTGGACGAAGCGGACTCTCCGCGCCACCGTCTGCTGGTCCTGGTGAAGGATCATGGTGAACCTGCGCTGACCGCCACGGCCACGGTTCTGGTGTCGCTGGTGGAGAGCGGCCAGGCTCCAAAAGCGTCATCGAGGCAGTCGGCTGGCGTTTTGGGTCCGGAAGCGGCGCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGCGGTATCCAGCCTGCTGGTGCTCACGCTGCTGCTGTACACTGCGCTGCGGTGCTCAGCACTGCCCACTGAGGGCGGGTGCCGGGCGGGCAAGCCCACTCTGGTGTGCTCCAGTGCGGTGGGGAGCTGGTCATACTCGCAACAACAGCCGCAGAGGGTGTGCTCTGGTGAGGGGCCACCGAAGACGGACCTCATGGCCTTCAGCCCCTGCCTTCCTCCTGATCTGGGATCAGTTGATGTAGGCGAAGAGCAAGATTTAAATGTTGATCATGGCCTCAAAGTAAGTCCATTTAAATTTAGAACTCATAAATTCTATTTGTGGAAATTGTAGTTACTTTAAAAGTGTTTCAGATTTAGTTTTTCACCGTATTTTATAGTGAAAATTTAAACATTGTTTAGTTTTTAGAAACCTTTTATAATTAATTGAATTTTCTCAGTGGCATAATACAGTATTAATCATTCTCCACAAGTTGGGTCTATCTTGAAACTCAAGTTATGGTTGGATGATATCCATTTTTTACTGAATATTTATTTTGGCCTGCCTTACAGCCGTCTTCTCTGAACAATACTCTAAGGACGTTCAGGGCATTTTGATCTTTGGTGAAAGTATTCCCCCAAAGCGTTTATTCTTTTGTCCTTAGGCACTGAACTCTTAATCTTACTCCATATGCTGTACTTTGAAATGCATGTTTTAAATATGTTGTCTTTATATTTACTTTTATTCACTTTAAGATCTCGGTTTATTCATCTTATCTGACTTTTTAGTGTCTGGTAGTCACAAATATCTTTGGTGTTTCACTATTGCCGTTTTAAGCAGTGTAGTGATAAAATACAGAATGATAGTGTTTTTCAAAATTTGATAGTTTTCATATTCTTCCTAATTTTATTATAAACTAGTTAAAAAGTAAAATCAAGAGGGAAGAGATTTGTAATCCTTCTTTTAATTCATTATTTAGACCATTTTACCATTTGGAGACATGTTTTTTATTCTACATGATTTTTACAGTTGTATTGTCGCCAACTTAACATTTTTTGAGCCTCTATGTTTAGGAAATGATTACTTTATTCTTGCAAGTATCTTCTAAACTCTAATCATTCAACCCTTTGTTCATGAGTTGGAATATTTTCAATAATATTCCACATTAAAGTGATATTTAATATATGACTTAGAAAAATGTTTTCATCAGAAAAACTATACATGATAATTTCATTCTTGCAAACCAAACATATAATTTATAAATCCTTATTATACAGAATATTTGGGATTATCATGGCCCATTAGTTCGTGTAAAAATATTTAGTATTATGGGATAAATCTTTGAAAAATCCAAGATACTTTATTTTGGTATCTTTCAACATTTTCTTTCTTTTATTTCTTCTTGTCTTTTTACACGTTTGCTTCTTGTGACTGTTGGACCTGCCTGGATATTAAATACCCATTAGACTTCGTGCATATTGCTTTGGAGAGAATGGTAGAAATTGATGGAAGGGAATGAACGATTTCTGGGACTCTGAATTCTTACAGTTTGTTATTAGTATTGTTTTAAATCTTTTAATCACTTATGAACAAATAATGTAATCATTTATGGGCATATTTTAGCCCCCTTGTCCAACTGAAGGTAACCTCAAAGCAGCATTGTTTTGTAGTTTATTTTACAGTTCTCTTAATGCCTGTCCATGTTTAGCATTTTATTTGACTATTTGAACACATTGTGTAAAAGCGAATTGTTTTCATTTTAGTCCTTTAAAAAATATGATTGTTTTCATTTAAGTCCTTTTAAAAAATATGATTATCTTTATTATCCTGTTTGAATAATATGTGTTTTCCTTTGTGAAAGTAATATTTCCTATCCTGTCTATGTCTACCTGGTTCTCAGGTATTACTTTAATTACTGAATTCTCCTAAACATTTAATTGACTTTTACAAAATATCATAAATAGGAGGATTCTTTCCACCACCTAGCATTGTATTTGGCAATTTATCATTTAAGTCATTTTAGTTCTGTTTTTCTTCAACTCTCTGATATTTGAATTTGGGGTTGTGCTTTCACAGTGAGAAAGTCTAAACCTATTTCTTGTACATTAATACTTTTCACTATTCTAATTATGGTGATGCTTTTAGCTATTAAGAATTTCTGGGATTGAAATGTGTCAGAAGTTAGTTATTAAGTATTGTGGATTCTGAAGCTCTCTAAATCAAGTCCTCCCTTTACCAATTTTTGTATGTGTAGCCATTGGTAAAGGATTTGTTATTCAGTTCCTTGGCATTATATGTATGCATGATAAATGTGAATTCTACTTTATAGATTTATTTGTATCAAGTAAGTTAATAGTTATAAATTATTAATAATAAACTCTGGCAAGTGATAGGTACATAATAAAATTTAGTTATTACCATTCTTAAGAGAAAAGAAGTTAGTGATTGCAGAAAGGCAACCTAAAATGTCAGAAAGTCGTTATGGCCTTCCATATTAATCTTATTTTTGTGTAAAACTATCTTCTGTAAAGTCATTTTTTAGATTAACCTAGGATGTTTCAATATTTTGAATGTTGTGTGGTGGAATGAAAAAAATCTAAAAGTTATTACGAGTTTAGGAAAGTCAAGTTAACACCACCTATGTGGGAAAACAGTTTTTTGGAAAGGTTAAAGTCCTTCCAAGGAATGTGTAGACTATCTTACTTTGATAGTTGTATGTTTCCCATATTTAAAAGTTGCCTGAGATCCTGCAGAGGCCTGAGTAGGCGTTTGAGTTCTTTGTATGTATGAGATCTTTCCATTAATAGTATTTTTCTTAAAAAGAAGTATACAATAATGTTTTGATGATGATTTAAAGTCAATTTATGTTGTAGTTCTATGAATTAAGTAAACCATTTATGTAGAGTGTTGTAAATAGCCTTTTAAAGTGCTTTCTCTTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTATCTCCCAGGCTGGAATGCAGTGGCGCAATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAATGATTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCATGCCACCATGCCCTGCTAATTTTTTGTATTTTTAGTAGAGTCGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCCTGATCCGCCCACTTCGGCCTCCTAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCAGCCTAAAATGCTTTCTTAGCAAGTAGAGAAGATTGTAATAACCAGTCTTCATTAAACATTAAATAGGACCCTTACAGATCTCTAACAGCATATCATCATGTCAGGAATTATTACTGAGCCCCAGCCCCTGGCTTTAAAATTTGAGGTCAAATAAAGAATATGAGTCACACAATGCAAGGCAAGATAATGTAACAGGTACAAGAGGTAAATCAGAATGACGTTGAAGTTGAAAGACAATCATTTCCTATTTGAATTTTTGAAGAAATACTTGAAGGGGCATGGTGTGTTTCAGTGGTTTTAAAATAAGTAAGTTCCCCCCGGGAGAATATTGAGAATGATAGACATTTCTTGGAAAGAGAAAACATAAGGAAAGTTGAAGACACAGAAAGCATCAATATGACAAGTAGAAAAGTCCACTTTGGTTAAAACACACAGTCTGCAGAGAATGAAAGCAGGAAAACCAATGTAAGAAGATCTCTTGATTTCTGAGTAATAAACTAAAGGGCCATGAGTGATTAAGGAATTTGGCCACTCTTTAGAATTAATTGGGAGCTATTTAACTACCTTGAGCAAAATAAATCACGACTTTTGAAAGAAGGTTGAACGGGAAGACAAACTCAGAAGCTCCTGCAGTAATCAAGGACAGAAGCAATTGTTAAATGCACCTCTTAGGCTGTTATCAGTAGAAATACGAAATAAAAGATAAATATGCAAAAACATTAATGGCACAATAAACACTCACGGTTTTGCCTTTAGACTTGAGATACACTAAAATCTAGATTTAATTAATCGACTTGGACGTTGGAATAAGATAGTAAAACTCACAACAAAACTTTGTAGAACTTAGTCAGGAAAAGAATCTCAAGCATAGCTTTAAAAACAGAAATTGCCCCGAGTACTAAGGATGAGCAATAATGAAATTAAAACATATTGTAATAACATTACACAAACTATATTGGAGACTACAAAGAAGAGATTATTCATAGATTATAAAGCTTGGAAAGAATCAAAACAACACATTTCTGGAAACAGATTGTATAAATGCTACAAAAGAGAAAAATATATTTTCTCCCCACGCAACACAAGACCTTAAAGTCAATTCTCGCTTTTCTTGCAATATTTTATACCTTTTCAATTCATAGAATTACTCAAGAAAACTACCTCAGTTGGTTGCTACTTTTTGTTGATTCCTTTTACCAGACATGACTAAGTTTCTTTTTCATCAGTAGATTTCTGGGCTCCTATATTCACTAGAGATTGCAACTCCTGGATTTCTCTTACACTAGAATCCTATTTCGAGCCATATGGGAGATTCTGAATTCCAGAACAAAAGAATTTTGTAATTTAAAATTCGTGATTGCTCAATGGAATCATTTTAATTGTTACTTCATTTCTGTCGTTATTTAAAACTTAAGTGGAGAGTTTTCTCAGGGATAAGAAAACCACAATCAAGGTCATACAAAACTTTTAGAGGCAGTCAGTCTGCTAAGAAGGCTCCAGCAAGAGAAACGGGATCTTCTGTTTCAACAATCATTACTTAAGAAAAAATTAAGAAAATGAAATAAGTTTTGCAGAATAACTGTGAAATTTTTATTCATGAAATATGTACTTACACTTTGGGCCACGTGATGTCACTCTTTGCCGCGATGTTCTCTCTGAATCCAGACAAATACAGCCCTTTTCCCATGGGAAAGAGGCTCAATTCTTTTTCACTCTCTCTGTGCTGAACGATGGCGAACACAGCAGAATGGGACTGACGAAATCAGATGATTTCTTCTAATTTGGAGGCAATTTTCACTAATTAGAAGAAGACTGAGTATTTGAAATGTTATACTCAAGTCGAGGAGATCCAGAGGGTCAGCCTCTACTGCTCTCGCTTCTGATCCTCGCAATGTGGGTGGTGGGGAGCGGCCAGCTCCACTACTCCGTCCCGGAGGAAGCCGAACACGGCACCTTCGTGGGCCGCATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCCGCGCCTGTTCCAGTTGGATTCCAAAGGCCGCGGGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGCGAGGAGCTGTGCGGGCGGAGCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTAGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGGAGGTGAAGGACATTAACGACAACCCTCCAGTGTTCCCAGCGACACAAAAGAATCTGTTCATCGCGGAATCCAGGCCGCTTGACTCTCGGTTTCCACTAGAGGGCGCGTCCGATGCAGATATCGGGGAGAACGCCCTGCTCACTTACAGACTGAGCCCCAATGAGTATTTCTTCCTGGACGTGCCAACCAGCAACCAGCAGGTAAAACCTCTTGGACTTGTATTACGGAAACTTTTAGACAGAGAAGAAACTCCGGAGCTTCATTTATTGCTCACGGCCACCGATGGAGGCAAACCCGAGCTGACTGGCACCGTTCAATTACTCATCACGGTACTGGACAACAATGACAATGCCCCAGTGTTCGACAGAACCCTGTATACGGTGAAATTACCAGAAAACGTTTCTATCGGAACGCTGGTGATTCACCCCAATGCCTCAGATTTAGACGAAGGCTTGAATGGGGATATTATTTACTCCTTCTCCAGTGATGTTTCTCCAGATATAAAATCCAAGTTCCACATGGACCCCTTAAGTGGGGCAATCACAGTGATAGGACATATGGATTTTGAAGAAAGTAGAGCACACAAGATCCCAGTCGAGGCTGTCGATAAAGGCTTCCCACCCCTGGCTGGTCATTGTACACTTCTTGTGGAAGTTGTGGATGTAAATGACAATGCTCCACAGTTGACTATCAAAACGCTCTCGGTTCCTGTAAAAGAGGACGCACAACTGGGGACAGTTATTGCCCTGATTAGTGTGATCGACCTAGACGCAGATGCCAACGGGCAGGTTACCTGCTCCCTGACGCCCCACGTCCCCTTCAAGCTGGTGTCCACCTACAAGAATTACTACTCGTTGGTGCTGGACAGAGCTCTGGACCGCGAGAGTGTGTCCGCCTACGAGCTGGTGGTTACCGCGCGGGACGGGGGCTCGCCTTCACTGTGGGCCACGGCCAGGGTGTCTGTGGAGGTGGCCGACGTGAACGACAACGCACCAGCGTTCGCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAACCCGCCGGGCTGCCACATCTTCACGGTGTCTGCGCGGGACGCTGACGCGCAGGAGAACGCCCTGGTGTCCTACTCGCTGGTGGAGCGGCGGTTGGGCGAGCGCTCGCTGTCGAGCTACGTGTCAGTGCACGCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGTTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAGGTGAGCGCGCGCGACGCGGGCGTGCCGCCTCTGGGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAATGCGCCGGCGCTGCTGACACCTCGGATGAGGGGCACTGACGGCGCAGTGAGCGAGATGGTGCTGCGGTCGGTGGGCGCCGGCGTAGTGGTGGGGAAGGTGCGCGCAGTGGACGCCGACTCGGGCTACAACGCGTGGCTTTCATACGAGCTGCAGCCAGAAACGGCCAGCGCGAGCATCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATCAGCACAACGCGTGCCCTGGACGAAACGGACGCACCGCGCCAGCGCCTACTGGTGCTGGTGAAAGACCACGGGGAGCCAGCGCTGACGGCCACGGCCACTGTGCTGGTGTCGCTGGTGGAGAGCGGCCAGGCGCCAAAGTCATCGTCGCGGGCGTCAGTGGGTGCCACGGGCCCCGAGGTGACGCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGCGGTGTCTAGCCTGTTGGTTCTCACGCTGCTGCTGTACACTGTGCTGCGGTGCTCGGCGATGCCCACCGAGGGCGAGTGCGCGCCTGGCAAGCCGACGCTGGTGTGTTCTAGCGCGGTGGGGAGTTGGTCGTACTCGCAGCAGAGGAGGCAGAGGGTGTGCTCTGGCGAGGGTAAGCAGAAGACCGACCTCATGGCCTTCAGCCCGGGCCTTTCTCCTTGTGCTGGATCTACAGAGCGAACGGGAGAACCCTCTGCTTCCTCAGATTCAACTGGGAAGGTGGGTTTTTCTAGCATTTTATTTATTTATATAATTTTTTTTCTTGAAAGATATTATCGATTACTCCCAGGGGCCGTTCAAATAGTTTTATTCATTTTTCTAGAAATCCAGCAGATTTTTTTTCTGATAAAGTAAACCCCTTAACATTGGAGCCGACTTTGTCTTGACTTCTAGTGAGAATTATAAACTGTATATTAAATAGATATTTTTTGGGTGCTGAATCAATTTTATTTAAATTTGTGATTAAAGTGACATTGAATTTCTGATGCTATGCTGCCATAACACTTGAAAACCAATTTAGTTGTTAGTCATTCATTAAACATTAACATCACTATCATTTATTTATTGCTAAATGATGCATAGTATTTTAGTCTACTTGTATTGTTTATAAGAAACCCAAGCAAAAATATATAGCAATTGTTACCTTGTTAAGTTTGTAGTTCTCTACATTTCTCTGGATGGAGACTGTGAACATCTGATTGTTCAGCAACCTTCAGTATCTATTATTTTAATAAGAAAGAAACTTCCCCTAAACTTTAGAAAACAGTTGCTCCACTTTAGGAATCAAATTATGTCAATAAATGTTATAAACACAGCCTTCATTTCAACTTATATAAAATATGTTTTAAAATGCCTGACAATGTAGATAATTCAAGAAATGTTGACTGAAATTTTGTCTACACTTAGAACATTTTTTGAAATTCAGTTTACAGAAATTGGAGAAAATGCTTTTTAAACAAGTGTTTCCTTTCTTCAAGAAGATATTCTCCTTTTAATTGAAATTTTCTCCATTCAGTGATAAAATGATCAGCCATGTGAAGATTCGAAACTTCGAGTTCTTTTGAAATTCAGAGTCTGTAACTTAAAACATTACCCTTATGAATTTAGATGAGAATTCACTTGTTCTGTCAGTAATCCATAAGACAGAAATCTGTTTTTTTAAAAATATCTTTTTCTCCTCTCAGCTCATACATAACACAAGGCAGAAATCTGGATATGAGATTTGCCTCTTTAATGTCACTACATGTTATGTTTCCTGAATTGTAGTATGTGACTTTCAAAATGGTGGTTTTCCACACTCTACCTTTAGTGCAAGCTATTTGTTTGTTTTCTAATTTATAGTTTTAAAAACTTCGCTTATTGAGTTTTTGTTATGTGGTTTATATTTTTCTTTCTCTTTCAGCTATTTTATTTAATATTGTGTCAGATATTTTACAAGGTATGACCTAATTAAAAACTCAGTAGAGAAAGATCAGAATGGCCTTGAGAATAGAGCCACAAAAATAACTATGAAAATGCCAGTAACGTTTATTTAAAACAAAATATTTTAATTTTTAAATTTTCCCTTAAAACACACTTTTGGAATATGCTACAATATTACATGTTTTTTGTCTTTTTATTTTTCTGAGACGGAGTCGTTTTCTGCCACCCAGGCTGGAGTACAGTGGCATGATCTTGGCTCACTGCAACGTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCACATGCCACCGCGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGTTGGTCTCGAACTCCTGACCTTGTGATGCTCCCACCTCGGCCTCCCAAAGTGCTGGGATTAAAGCTGTGAGCCACTGTGCCAAGGCTTTTTTATTTTTTTTTTTTGTCATTTTCTTTCAAAACTTGAGTGGTCTCTGAGCTCCTGTCATTAAACCTATCTATATCTGTCTATCAGCACAACTCACCTTGAATATAGTCTTATACTTTCAAGTATCTTTGTCTTTGCACGTTTTTCAAGTTTCATGTGCCATTTAAACTTGGACCCAGGTATCTGATTATTTGATGTGAATAGAGGGATGCTACAGATGTCATTTGTCTCCCGCCCTAAGTCCTCCAGTCTCCTTAGAGCTAGTACTTACTAAGCATTTACTATGTCATCAATAATCATAAAACGTATTTTTTTTTTTGAGTCAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCCATCTTGGCTCACTCCAAGCTCCCCCTCCCGTGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCATGCCCGCCTAATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGTCAGGATGGTCTCGATCTCCTGACCTCATGATCCTCCCGCCTCAGCCTCCCAAAATGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCTAAAATGTGTTCTTTATTATTGACGGCTGTATTGATGGGATTGGTAATTTAGTCCTTCATATTAATCTCTATTCTCTCTCAGAGTACAAGCTCTCATCATATGCAAATTCTCAGAAGGGCTGTGAACACCTTAGTAATAAATTTATCTTTTGAGGTCATTAGCAAACATGAACTCACAGGGATCCAGAGATGGTAAAATTCAAAACAGCCTGTCAAGTTCAAAACAGAGAGGTGAAAGCAGAAGAGACACTTTCCTATTTTGCCTAATAGGTCTCCTTATATGCATCTGTAGTTAACATTCCTCAATTCAAGTTAGAATCATGAAACAATAATGAAGCTCCTCCTATGTCTCTTTTCAAGTTGTAATTACTATATAGGAAAAACTAAGTTGTCACCCAATATCTTAGACACTTTGAGAGCAAAGGGGGTGCTGTAAATAAGTATACAAGATCACAGACCTAAATTGAGCCTGTTCCAGACAAATTGGGGCCTATGGTCAACCTATCCTTAGACCTGCTAACGCATTAGCATTAGCAGCACCTAAGTCCTCATTGAATGTTCTGGTTCAAGGCTCCACCTCAGAAATTCTGAAATGGGTAGTAAGAGCAAATTTTCATTTTAAAGCACACCTGAGATGATTCTCATACAACCGAAATTTTAGATCCATAGCCCTATTTGATACTTGACAGTGCAAGTTTCTGTAATTTAAAAAGATGTGGTGGCCTGACACCTGCAATCCCAACATTTTGGGAGGCCAAGGTGGGAGGGTCCCTTCCTTGAGCCCAGCAGTTTGAGACCAATGTAGTGAGACTCATCTCTGCCAAAAAAAAAAAATTAGCCGGGCATGGTGGCACACATCTCTAGTCCCAATTACTCAGGAGGCTGAGGCGAGAGAATCGCTTGAGCCTGGGACATTGAGGCTGCAGTGAACTGTGATGGCACAACTGCATTTCAGCCCGGGAGACAGCAAGATTCTGTCTCAAAAAAAAAAAAAAAAAGAGTAGTTTAACTACTCCCTACTTTTTATTCAATATTGGACATCTACATTGGGATATTTATGTTATCACTTGGTATAAAATGTACATTAGTAGAAATTGAGTTTAGTTTTTATTATTTTGTGCGTGGAGATGATTGATCAATGGCAAACTTATTTTACGCTCCAGATAGCTAAAACAAACGTTGATATTTTGATACATAACTCATTACATTTTAATTCAGGGTTTATAAAAAAGTAATCTCTAAAATCAGAATTTGAATGAATTTTGATGCAAGAGGCATTCCAGAGGAGTAGAGAAGTATAGAAACAGAATTTAGTAGGACACATAAACTGATGGATTAAGTGACACCCATTTCTGTCAGTTTTCTTATTCATAAATATTGTTGCTCTGTCATTCAGATTTTAATAAAAAAAGTTTAAAGTAATTGACACATTTAAAAATATTCTTTAGAAAAGTCAAAACATCATTAAATAAAATAAATTAACCCTTGCATAAGACCAATATGTCTGTTGTTAAGTTTTCCTTTCTTGGAAAGACAGAAAACTCAAGTTTTTTTCAGCAGCACAGATATATTACATTTTCATTCCTGAATATTTGATTTCAAGAACTTTGAGAGAGAAAAAAATATTTTTACTGCAAGTGGTGATGAAAAACTTCACTGACATTGATAAAATTACTAGATATATTTCAGAACTGTGTCTTTTGGGCATTTGAAAAGCGTAAATATAACAGGGTTGAAAGCATTTGCCTCTGAAAGCAGAAATAATAAATTTCTTAATTACTTTATTCAGAATTATAATTAAGATTCTTTTTGCCCGTGTAAGATATTATAAAATGAAACTTCTTGTATAAAGGATTTTTCTGTAATAGTACTTTTCTGTTTTCTTAAATACAGAAACCACCACTCTCAGCCTGTGCAGTAGCAATAATTAAGGCATTCTATAGGTAATAATTTTGCCTGATGAGCCAAATTTGGTATTGAGCCTCATGAAAACAAATGTGGCCAAATTGAGGCCTGAGAATAGTTTCCATTTATGAAGCACTCATTCTCCTTAAGGTACTATTGCAAGCACTTACTATATTATAATTCACTCAACCACCGTATTACTATTAGGCCAAAGTTATAAAATTGGAACATGAGGGAGGGAGAGGTTAAACGATTTTCCCAAGTCATGTGGCTAGTGAGTAGGATAATAGGAATCTAAATGGAGAAATGTCTGATGTTGAAGCTAATGATCTCTAAATTCTAGTGATGACTAGATCTTCGGAGTTATAAACACCTCACAGATAGTTGATGCTTGACATTAGTGTCTAAATAAACCTTATTAAATCTCAAAATAATGAGAAAGAGAAGTAAGTTAAGTGTCAGAACTTAAATGGAACTAAAGTTGTCATTTAATAAAATATTAGTATACTCAGTAGTATGCAAATATTAAGGGCATTTTGAAATTCGGCTATTGATAATCATGTGGTTAGGGAAGAAATCACTACTCTGAGAGTCTACATTTAAGAAAACATTGCACGTGGGATCAACATTTATTGTTATTAACTATAAAGAGACGTAATGTGAGGCTTTGAAAGTCCATAGACATAAAAATACGTAAAAAAAGAATTAACATATGAATGAAAGAAAAGTTGTGAACTCATGGAATCGTACTTACACCTAAAGCCACCGGATGTCGCTGTCGTCCACAAAATAGCTTTTTAGAACAAAGGCATCAGCCAGTTTCTCAAGGACTAGGAAGTAGCGTCATTCTGAGATCTCAGCCATTTCGATAAAAAATAGATATAAGAAATAGGACAGAAAATGTCAGATCGTATGTGCGTTCTAGACCGCTGATTCGTCGATTTGTAAAACAAGAGAAGGATAAGATGGTTTCCAGATGTAGCTGCCTGGGGGTCCAGTGTCTGCTGCTCTCGCTTCTTCTCCTCGCAGCCTGGGAGGTGGGGAGCGGCCAGCTCCACTACTCAGTCTACGAGGAGGCCAGACACGGCACCTTCGTGGGCCGCATCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCAGCGCCTGTTCCGGGTGGCGTCCAAAAGACACGGGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATTGACCGCGAGGAGCTGTGCGGGCGGAGCGTGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGGAAGTGAAGGACATTAACGACAACCCGCCCAGGTTCTCCGTAACAGAACAAAAGCTCTCAATACCTGAATCCAGACTGCTTGACTCTCGATTTCCACTAGAAGGCGCATCTGATGCGGATGTTGGAGAGAACGCATTGCTTACTTACAAACTCAGTCCAAATGAGTATTTTGTTCTTGATATTATAAACAAAAAAGACAAAGACAAATTCCCAGTGCTTGTTCTGCGGAAGCTGCTGGATCGTGAAGAAAATCCTCAGCTAAAGTTGTTGTTGACAGCAACTGATGGAGGCAAACCTGAATTTACCGGATCTGTTTCTCTGCTGATCCTGGTGTTAGATGCCAATGATAACGCCCCTATCTTTGACAGACCGGTTTATGAAGTTAAGATGTATGAAAATCAAGTGAACCAAACATTAGTAATACGGCTCAACGCTTCTGATTCGGATGAAGGAATAAACAAGGAAATGATGTATTCATTTAGCTCTTTGGTCCCACCCACGATAAGAAGGAAATTTTGGATAAACGAAAGGACGGGAGAAATAAAAGTAAATGATGCTATTGACTTTGAGGACAGTAACACTTATGAAATTCATGTAGATGTTACAGATAAGGGAAACCCACCTATGGTTGGTCACTGCACGGTCCTAGTGGAACTACTGGATGAAAATGATAATTCACCTGAGGTGATTGTCACTTCTCTGTCTCTCCCAGTGAAAGAAGATGCTCAAGTGGGCACCGTCATTGCCCTAATCAGCGTTTCTGACCATGATTCAGGAGCCAACGGACAGGTCACCTGCTCTCTGACGCCTCACGTTCCGTTCAAGCTGGTGTCCACCTACAAGAATTACTACTCATTGGTGCTGGACAGCGCTCTGGACCGCGAGAGGGTGTCGGCCTATGAGCTGGTGGTGACCGCGCGGGACGGGGGCTCGCCTCCGCTGTGGGCCACGGCCAGCGTGTCTGTGGAGGTGGCCGACGTGAACGACAACGCGCCTGCGTTCGCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAACCCGCCAGGCTGCCACATCTTCACGGTGTCTGCGTGGGACGCGGACGCGCAGGAGAACGCCCTGGTGTCCTACTCTCTGGTGGAGCGGCGGTTGGGCGAGCGCTCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTACGCGCTGCAGCCGCTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAGGTGAGCGCGCGCGATGGGGGCGTGCCGCCTCTGGGCAGCAACTTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCTCCCGCGCTGCTGGCGTCTCCCGCTGGCAGCGCGGGCGGTGCAGTCAGTGAGCTGGTGCTGCGGTCGGTGGTTGCGGGTCACGTGGTGGCTAAGGTGCGCGCAGTGGACGCTGACTCTGGATACAACGCGTGGCTGTCGTATGAATTGCAGTCGGCGGCGGTTGGTGCACGCATCCCGTTTCGCGTGGGGCTGTACACGGGCGAGATCAGTACGACGCGCGCTCTGGATGAGACTGACTCGCCACGCCAGCGCCTACTGGTGCTGGTGAAGGACCATGGCGAGCCGTCGCTGACGGCCACGGCCACTGTGCTTGTGTCGCTTGTGGAGGGCAGCCAGGCACCCAAGGCCTCGTCGCGGGCTTCAGTGGGCGTGGCGCCCGAGGTGGCCCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGCGGTGTCCAGCTTGCTGGTGCTCACGCTGCTGCTGTACACTGCACTGAGGTGCTCGGCGGCGCCCACCGAGGGCGCATGTGGGCCGGTGAAGCCCACGCTGGTGTGCTCTAGCGCGGTGGGGAGCTGGTCTTACTCGCAGCAGAGGCGGCAGAGGGTGTGTTCTGGGGAGGGCCTGCCCAAGGCGGACCTCATGGCCTTCAGCCCCAGCCTTCCACCATGCCCAATGGTAGATGTGGACGGGGAAGATCAGTCTATTGGAGGGGACCACTCTAGGAAGGTGGGTTATTACGTTTTCATTTTCCTTTTGTGCTTTATGAATAATATTTTCTCTTACCGCATTTTCTCAAATATGTATCAGAATATTTCATTTTTGTCTACATTCCATTTATGCTTGAATATTTCTAGTGATACCTTTGTAATATAATTTATTCCAGGAGTTTTAAAATTTTTTTATCCTACCCAGTGTGTCAGCCTTTGATTGGTACTTAAATTTTTTTAAATAACAATTTATTCTGAATACACTAATATTTTCCAATACAAATATGTGATATAGGTTGCAGTTCTGACGATTTACTTTCATAATCACTTTTCGTTACAAATATTTGTGAGATTAGTACTTCATGTTATTTCATTTCCAATCTAAATTTTGATTTGATTGTATTTGCATTACCAAAAAATTCCACTGATCTATATCTCTTCAGTGAAAATGTGTTTTCCTCCATGTGTAGAATATGTGTAGCGTACCACAGCTTATACTGCCATAGTAGATTTCAATGTTCAGTGATTACAGCTTTTTCTCAATAGTGCAGTAAGTAGGTGGGCAGTTCATTGGTAAAAATTTCTTAATCTTAGCAATTAAGTTAAATGCTTTGAACTTTAAAAACGTTTTCCATTTTTATTTTAGTTGTAGTGGTACCTGTGTCAGTGTGTATTATTCACTTAGCAGAAGAAAATGTATGTTTCTTTTATTTACATAATTTTATCCAGTAGCTCTTCATTATCTGCTCCTTTATCAGCATTAGGCATTGCTTATGATATTCAGGTATTAGCTCTTTCACTTTAAGGAAGGAGTCATGCTTATGTTTAATAATGAAGAGAATTTGAACACTTTTTACTTTTGAGACTGAAAATACTTTAGTATGAATTAATATTAAAAGTTTGAGGAGAAAATAAAATTAATGTTTTCT	CCA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4297:HG3_PB_pbsv_6010:HG2_PB_pbsv_6180:HG2_10X_allpass_1039:HG3_PB_SVrefine2PBcRDovetail_2864:HG2_PB_SVrefine2PBcRplusDovetail_9133:HG2_PB_SVrefine2PB10Xhap12_4517:HG2_PB_SVrefine2Falcon2Bionano_3090:HG2_PB_PB10Xdip_23303:HG2_Ill_tnscope_726:HG3_10X_allpass_1274:HG2_Ill_MetaSV_4117:HG3_Ill_Krunchall_8673:HG2_Ill_Krunchall_8873;NumClusterSVs=14;ExactMatchIDs=HG2_PB_PB10Xdip_23303:HG2_PB_SVrefine2Falcon2Bionano_3090:HG2_PB_SVrefine2PB10Xhap12_4517:HG2_PB_SVrefine2PBcRplusDovetail_9133:HG3_PB_SVrefine2PBcRDovetail_2864;NumExactMatchSVs=5;ClusterMaxShiftDist=0.00297354;ClusterMaxSizeDiff=0.00297354;ClusterMaxEditDist=0.00297354;PBcalls=7;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-16791;DistBack=3309;DistForward=3521;DistMin=3309;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8100;REFWIDENED=5:140214038-140248757;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9999;PctRecOverlap=0.9998;SizeDiff=1;StartDistance=-1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=3263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:70:65:./.:38:2:18:32:./.:0:0:0:0:0/1:79:30:0/1:462:203:16840:.:.
chr5	141459200	HG3_Ill_manta_1477	ATCACTACAGACTTGGGCCTGCTGTGATGTACAGGGGTGGTAGCATCAACCAGATCTCAGCCAAGAAATGAAAACCTGCATGTCCACTGTGGTAGCCACCTGCCATCTGTGGCTACTGAGCACTTGAAATGTGATTAGCCCAAATTGAGATGTGCTGTAAGTGTAAAACACACACTGGATTTTGAAGACAGTATGTAAAAAAGAACATAGCAGGCTGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCACTTGAGGTTAGGAGTTTGAGACCAGCCTGGC	A	20	PASS	ClusterIDs=HG3_Ill_Krunchall_8682:HG2_10X_allpass_1040:HG3_PB_SVrefine2Falcon1Dovetail_3863:HG2_PB_SVrefine2PB10Xhap12_4525:HG3_PB_HySA_9569:HG3_Ill_MetaSV_4299:HG2_Ill_tnscope_728:HG2_Ill_MetaSV_4120:HG3_PB_pbsv_6015:HG3_PB_SVrefine2PBcRDovetail_2870:HG3_Ill_scalpel_6204:HG3_Ill_manta_1477:HG3_Ill_SVrefine2DISCOVARDovetail_4708:HG3_Ill_GATKHCSBGrefine_4251:HG3_10X_allpass_1276:HG2_PB_pbsv_6186:HG2_PB_SVrefine2PB10Xhap12_4524:HG2_PB_SVrefine2Falcon1plusDovetail_9803:HG2_Ill_manta_1783:HG2_Ill_SpiralSDKrefine_14007:HG2_Ill_SVrefine2DISCOVARplusDovetail_10672:HG4_PB_SVrefine2Falcon1Dovetail_3756;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10672:HG2_Ill_SpiralSDKrefine_14007:HG2_Ill_manta_1783:HG2_PB_SVrefine2Falcon1plusDovetail_9803:HG2_PB_SVrefine2PB10Xhap12_4524:HG2_PB_pbsv_6186:HG3_10X_allpass_1276:HG3_Ill_GATKHCSBGrefine_4251:HG3_Ill_SVrefine2DISCOVARDovetail_4708:HG3_Ill_manta_1477:HG3_Ill_scalpel_6204:HG3_PB_SVrefine2PBcRDovetail_2870:HG3_PB_pbsv_6015;NumExactMatchSVs=13;ClusterMaxShiftDist=0.270123;ClusterMaxSizeDiff=0.270123;ClusterMaxEditDist=0.270123;PBcalls=9;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-305;DistBack=3426;DistForward=-294;DistMin=-294;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:141459201-141459505;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:31:1|0:5:26:16:1:./.:0:0:0:0:0/1:50:20:0/1:34:5:.:.:.
chr5	142664516	HG2_Ill_SpiralSDKrefine_14016	TAATTTATGGGTCAGACTACTGGAAACGAAGGAGGTACACAAAGAAAGGCCTCCAGAAATCTGTAC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8186:HG2_PB_HySA_11550:HG4_PB_pbsv_6218:HG3_PB_pbsv_6022:HG2_PB_pbsv_6193:HG4_PB_SVrefine2PBcRDovetail_3104:HG4_PB_SVrefine2Falcon1Dovetail_3759:HG4_Ill_SVrefine2DISCOVARDovetail_4606:HG4_Ill_250bpfermikitraw_8792:HG4_Ill_150bpfermikitraw_8412:HG3_PB_SVrefine2PBcRDovetail_2872:HG3_PB_SVrefine2Falcon1Dovetail_3866:HG3_Ill_SVrefine2DISCOVARDovetail_4713:HG3_Ill_250bpfermikitraw_8418:HG3_Ill_150bpfermikitraw_8233:HG2_PB_SVrefine2PBcRplusDovetail_9141:HG2_PB_SVrefine2PB10Xhap12_4527:HG2_PB_SVrefine2Falcon2Bionano_3098:HG2_PB_SVrefine2Falcon1plusDovetail_9807:HG2_Ill_SpiralSDKrefine_14016:HG2_Ill_SVrefine2DISCOVARplusDovetail_10674:HG2_Ill_250bpfermikitraw_8723;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8186:HG4_PB_SVrefine2PBcRDovetail_3104:HG4_PB_SVrefine2Falcon1Dovetail_3759:HG4_Ill_SVrefine2DISCOVARDovetail_4606:HG4_Ill_250bpfermikitraw_8792:HG4_Ill_150bpfermikitraw_8412:HG3_PB_SVrefine2PBcRDovetail_2872:HG3_PB_SVrefine2Falcon1Dovetail_3866:HG3_Ill_SVrefine2DISCOVARDovetail_4713:HG3_Ill_250bpfermikitraw_8418:HG3_Ill_150bpfermikitraw_8233:HG2_PB_SVrefine2PBcRplusDovetail_9141:HG2_PB_SVrefine2PB10Xhap12_4527:HG2_PB_SVrefine2Falcon2Bionano_3098:HG2_PB_SVrefine2Falcon1plusDovetail_9807:HG2_Ill_SpiralSDKrefine_14016:HG2_Ill_SVrefine2DISCOVARplusDovetail_10674:HG2_Ill_250bpfermikitraw_8723;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0458015;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.0625;PBcalls=12;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-65;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=131;REFWIDENED=5:142664517-142664712;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:./.:0:0:0:0:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr5	142935366	HG2_10X_allpass_1041	TAAAAATAAAAGTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCGGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9808:HG4_PB_pbsv_6220:HG4_Ill_Krunchall_9221:HG2_Ill_Krunchall_8900:HG2_PB_assemblyticsPBcR_21304:HG2_PB_assemblyticsfalcon_22034:HG2_PB_pbsv_6196:HG4_Ill_MetaSV_4283:HG2_Ill_tnscope_729:HG4_PB_SVrefine2PBcRDovetail_3105:HG4_Ill_scalpel_6010:HG4_Ill_manta_1564:HG4_Ill_SVrefine2DISCOVARDovetail_4607:HG4_Ill_GATKHCSBGrefine_4407:HG4_10X_allpass_1207:HG2_PB_SVrefine2PBcRplusDovetail_9142:HG2_PB_SVrefine2PB10Xhap12_4528:HG2_PB_SVrefine2Falcon2Bionano_3099:HG2_PB_HySA_11555:HG2_Ill_manta_1787:HG2_Ill_breakscan11_912:HG2_Ill_MetaSV_4122:HG2_Ill_GATKHCSBGrefine_4322:HG2_10X_allpass_1041;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_1041:HG2_Ill_GATKHCSBGrefine_4322:HG2_Ill_MetaSV_4122:HG2_Ill_breakscan11_912:HG2_Ill_manta_1787:HG2_PB_HySA_11555:HG2_PB_SVrefine2Falcon2Bionano_3099:HG2_PB_SVrefine2PB10Xhap12_4528:HG2_PB_SVrefine2PBcRplusDovetail_9142:HG4_10X_allpass_1207:HG4_Ill_GATKHCSBGrefine_4407:HG4_Ill_SVrefine2DISCOVARDovetail_4607:HG4_Ill_manta_1564:HG4_Ill_scalpel_6010:HG4_PB_SVrefine2PBcRDovetail_3105;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0882353;ClusterMaxSizeDiff=0.0882353;ClusterMaxEditDist=0.0882353;PBcalls=10;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=29000;DistForward=64027;DistMin=29000;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:142935367-142935692;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3266.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:61:0|1:41:0:0:57:./.:0:0:0:0:0/1:32:16:0/1:26:13:.:.:.
chr5	143181043	HG2_Ill_MetaSV_4124	GTTCCGGGTATGGCCAGAGCTAAGCATCTTGCTTGGCCCAACAGAGGGCCACTGTTGGGATGGGAAAGCAGAGGTTTTTGCATTTATGTGAGGCTGGAATTCACTGGAGACTTGAGGAGCCTCAAACACACAGCTGGTTTCCCTTTAAGAAATTTGCAGAATTCTGAAGCTGCATGGAATAGGAGATTAAAAATCAGAAAACTTCTGAAAAGCAAATGGGAGTTTTCTGTATTCTGTGTGCACTGAGAAGTCAAGGATCTCCCAGGCGCTGGGGTCCTGGTCGATACTTCATGTTCTCACTTAGAAGAAGGGCCTCATTCTGGGAACAGGAACAAACCCAAGATACACGCAGCCCAGTCACAAGCTTGGGGAAGATGCTTCTCCCAGCCCCAGTCTATCCACCCCACAGAGGAAAGGGTTGATCCTCTCCTGGTGGAAGATAACATCTACAGCCTTCATAAGTTTTTATACACAACAATCTGTCATTCAACTAGATATAAAGACCACTGAGGTCAGAAGATTCTCATACCCTGTCATGCAAGGATGGAGTATGTCTCCATGCTATTTTTAGCCAATCTACCTCTTGAACACCCTAATTGCACTAATGGAAACAGCTTTGATTATTAGCATGATAGAAAATAATCTATTATGCCAATAAACAAAACATATTGTTGATTAGAGATAAAGAGCTGAAACTCTTGCAGCAGCACTTCCGGGGTATCACTCTAATAATTAAGGGCTGGTTGATCACTCTGAAGTATGTATTTTTTATTAGAGTGTAGAATAAACACACATGTATTATAATACTTTATGATGAAATGTTTTAAAGTAAATAATAGCTCATATGAGACTAAAAGCTCTTTAATAATTTGTTGTATATTTTCAAAAAGTTAGAAGAGACTATTTTGAACGTTCACAACACAAAGAAATCATAAATGTTTGAAGTAACTGATACATTAATTATCCTGATTTGATCTTCATATATTGTATACACATACTGAAATATCACTCTGTATCCTATAAATATATATAATTATTACATGTCAACTGAAAATAAAATGGAAAAACATCAGAAGCCTTGGTAGATTCAACTCTGTGTGCCTAGCTCATTCAGCTCTCAGCTTGTAATAGGGGATCAGTCACACTTGTTGAGTGAATTAATAAATTAAATATTTAGGTAAAATAATAAATGATGGGCTGGGCGCAATGGTTCACACCTAAAATCCCAGCACTTTGGGAGGACAAGGAGGGTGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCGGTCTCTACTAAAAATACAAAAAAAAAATTAGCTGGGTGTGGTGGTACGCACTTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGAAAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGATCACACCACTGCTCTCCAGCCTGGGCGACACAGCAAGACTCCATCTCGAAAAATATAATAATAATAAATGACGGATTATTCTGGGCGTTATTTCAAATGGTGAAAATCAGAACAAGGGGCTGTTCGCCTGTTGGTACCTCTTCTCCCTAACTCATTTTGAATCCCCAGTAATGTCCTATATCCTGATTGGTTCTCATATCCTGTCTTGGATTGCTTTGTTACCATTCTGATTATTTTCCATGCCTTTCCTGGAAGGCAACGTAGCAAGGAGACTGGGAAGCAGGCACTCAGGTGTCAGGCAGACCTTATCAAGGGGCCTTGACTCTACAACTTACCTACCACCCATTTGGCCACTAGCAGGTTACTTAACCTCTCTGGATCTCAGCCCTCTACTGTACAATGGGTATAGCATAGTAGCTTTTACAGAAAGTTGATGTGAGGATTAAATAAGATAACACTTGTCAAATGCTTAGGAGAGTTCCTTCAACATAGTCCAATGTAGTTGTACAATAAAATATTAGCAATTATTGTATTCTTTTGTAAGCCTATGCATTGCTCAATTTGGATTTTTCAAACAAACAAAAATTAAGATTACATCAAGATTGTGCACCTTAACAAAACAAAAGCTCAGGAGAGATGAGACTCAAATAATAAATGCTAGAATACATACTTTTGTGTTAATATTCTGCCTTCAAAGAAGTCAACTTGAAAGACTAACACTGAGCTGAAGACATTTAAAAAGCAATTTCCCAGCCTGTTAACATTTTCCAGTCTATACAGGTCTCAAACATTTTGGGAGACCCCTAAAACCAGCTTCCTCACTTCCTAGGCATGTCTTAATATATATACGTGTGTGTATGTGTATATATATATATAATATTTTATATATAATTATATATAAAAATATATATAATATCTTTCTACCAAAATTGGTATCTCTAACAGAATTAACTTAACATAAGATCTAACTGAAAATTGCATTTACTTTTACAGAAATTAAATCTGACTTTAAAAGATGAATAATCTACAGACTCTCAACAATGAAGAGTATGTCTCGGCTTTTAAATACCACTGCCAAAGAGTTCTTTTAGGTCAAGACTCATTCATTTGGGGGTAGGATAACAGACTAGACTATTTACCTTCATTAACCTGAAACTATGGGAGGTGTGGAAGTCAACCTGTATTTGTCATTGGGTCCGAGTGTCTCTGCGGTCTACCTGTCCTTGAGCTGTCATAATGGCTGGTACATTTTCTAGGAGCATTGCATAAGGACTATTAGCAATTCCAAACAGCCAATCAAGCATATGTATATGACAACCTGCATTAAATATCAGTTAGTTTTCTCATCTCTGAGCAACAGAGCTGATTTTAAATCATATAAGTGTGTACGGCAAGAGTTGCATATAGCCAAAATTACCTTTTATAATCTTTTAGGAAGACATCAAATTGAATGCCAATAAACCCAACGCAGCCAGTTTTTTCCCACTGTCTAGACATATTCCTGTTTCTTTGGATTACTACCAGAATAAATAGTTGGCGTGCATTTGGAGGCCATATTTTAGGAAATGTTCTTATCTTGAAACACTAGTAGCACATTCAGTGCAGAGAGATGTCCATACCATGAGAGGAGCATGCGGGAACTGGCACCAAATGTGGAAGATCAGATTCACTTTTCCCATCTCTCCTGCACTCCAAGCACATATGTATTGAGGAGGTGGTCAGGTAGAATCACTGCACTATTTACATGGTTTATAGTATTTTCTTTTATTTTATGTTTCGCCTGGGCACACTGTATTGAACTCTACCAGTTGGCTCTATTAAATTAGATGCATGGAGATATACTCTATACCACAGTCTTGGAAAGAACTCATAGATAAAATTTACTGTCTGCCAGGGACTCTATTAAACATGCATTATTTTATGTAATCTTGTTTAAAGTTTTATTTTTTAAAGTCATACAGTAAAATTGACCTTTTTGGTGCACAGTTCCATGACATTTAACACAGACATAAATTCTTAAAATACCATCACAATCAGGACACAGAACAGTTCCATTACCCCATGAAACTCCCTGCTGTTCTCTTGCAGTCAACTCTTTCTCCACCCTTAACCCTGAGCAGATCCATGGCAGCCAAGCTCCTGTTTTCTGTCAATATACCTGTGTCTTTTCAAGAATGTTACATAAATGGAATTATACAATATATAACCTTTGAGACTGGTTTCTTTCACTTAGCCTAATGCCTCTGAGATTCATCCGAGCTGTGTGTATCAATAGTTCATTCCTTTCTGTTGCTGAGTAGTATTCCATTGTATGGCTATATCATAGCTTATTAATTCATTCTCCCAGTCTTTTGGGTTGCTTCCAGTTTTGGTGATTATAAATAAAACTGCTGTAAGTATTTACATATAGTTTTGTGTGAATATAAGTATTCATTTCACTTGGGAAAATATCCAACAGTGGGATTGTTAGGTCATATGGTAAGATTACATACAAAAAAACTACAAAACTTCTTCCAGAATGGCTGTACCATTTTGCATTCCCATTAGCAATGTATGAGAGTTTCAACTGCCATGCATCTTCATTAGAAGTTGGTATTGTCAGTAGTATTTTTAGTCATTTAATAGGTATGTGGCATATAATACTCTAATATCACTATAAAGTAGGTAGTATTATTATCTCAGTTTTATGAGTGAAGAAATGAAGGCTCAGAGAGTGTAAGTACATCACCATAGACCTCACATTATGTAAGGGTCAGAAGAATCCCAGGATTTAACTCCAGAGTCCTAAAGACATTCCACATTGTGGTATAAGAGCAATCTATTTGACAAGACATGTATCTTCATATGTGACTTCTATTTGCAAGTCATAAGCTTTAATACACCTTGTTGATTTCTTTTAAAAGTTGGGGATACGTTGCATAACTGTCAGTTTGTGAATAAGCTGGAAGATGCCTTCAATCAGACATGTACTTTCTTTTGAACAAAAAAAAAGAGAGAGCTTAGCAGAGACATTGAAGACACCAATTTAAATTTTCTCTTGCATTAAAAAAAATATTCAGGACAAGAAACCATGAAAAATTTTTAAAAACACATACACACATAATGCTCCCTGTGACCTTTTATTTCCCTTCTGCTTTTTCCTCCCACTGGGCAACCATTGCTTTTGGCTGGTTAAGAAAAATTCCAGCTCTTAAGAACCATTTTTATAGATTTGAAAAGAGAACATTTTTTGCTTTTTTTTCTTTCCCCCGAGGTTTTCTTTTTTCTTATCCTTCTTGAGCTATGGTCTTAGGACAATTTCACAGCCTCTCTGCAGCTATGATCGGGTTCCTTAGTAGAGGTAAAGTCACAGAAGAATGAAAGGCTGACTGCCGGGTCCATTTACAAAGAAGAAAATTTTAAAACAATCCGGCATCTTTGCATTTGTTATAATATATGCATATCATAAGTCTAGAAATATCAAACATCTGCCGATAATTTGGTTAGGTCATTTTCCATGGGCTTTTCTTTGACCTTTTTAATTGGTTGATAAGCACTTGGTCTAACCACAGGCAGTTGATAATAAACTAGAAATAGAAGAATGTTCAAGATTCAGACACTGGAAAGGAACCAATTACCTTTCCTAAAAGGGTAGATTTTCAACTTTGAGGACCAGAAATAATTCTTTGATTT	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_8904:HG2_10X_allpass_1042:HG4_PB_assemblyticsfalcon_21510:HG3_PB_assemblyticsfalcon_21963:HG2_Ill_tnscope_730:HG4_PB_SVrefine2Falcon1Dovetail_3760:HG3_PB_pbsv_6026:HG3_PB_SVrefine2Falcon1Dovetail_3868:HG3_Ill_MetaSV_4302:HG2_PB_pbsv_6200:HG2_PB_SVrefine2PBcRplusDovetail_9144:HG2_PB_SVrefine2Falcon2Bionano_3100:HG2_Ill_breakscan11_913:HG2_Ill_SpiralSDKrefine_14022:HG2_Ill_MetaSV_4124:HG3_Ill_Krunchall_8699;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_MetaSV_4124:HG2_Ill_SpiralSDKrefine_14022:HG2_Ill_breakscan11_913:HG2_PB_SVrefine2Falcon2Bionano_3100:HG2_PB_SVrefine2PBcRplusDovetail_9144:HG2_PB_pbsv_6200:HG3_Ill_MetaSV_4302:HG3_PB_SVrefine2Falcon1Dovetail_3868:HG3_PB_pbsv_6026:HG4_PB_SVrefine2Falcon1Dovetail_3760;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00176419;ClusterMaxSizeDiff=0.00176419;ClusterMaxEditDist=0.00176419;PBcalls=8;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-5104;DistBack=44883;DistForward=-5103;DistMin=-5103;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=5:143181044-143186150;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:52:36:./.:2:0:0:0:./.:0:0:0:0:0/1:60:10:0/1:394:191:5306:.:.
chr5	144871904	HG3_Ill_manta_1482	ATTCAGGTCCTTTGCAAAATTTTTAATCGAGTCATTTTGTTTTCTTGCTAATAAATTCCTTATATATTTTGGATATTGACCCCTTATCAGATGTATAGTTTGCAAATATTTTCTCCATTCTGTAGGTTATCTCTTCATTCTGTTGGTTGTTACCTTTGTTTTATAGCAGCTTTTTAGTATGATATAATCCCATTTGTCTATTTTTGTTTTTATTACTTGTGCTTTTGAGGTTATATCCAAAAATTCATTGCCTAGGTCAATGTCATAGAGCTTTTTCACTATGTTTTCTTCTAAAGTTTCACAGTTTTGAGTCTTACATTTAGGTCTTTAATCCATTTTGAGTTGATTTCTGAATATAGTGTGAGATAGGGTTCAGAAGTCTGGGCTGCTGGAGGGCTGCCTATAGCTAAGGGCTGTCCAGAATCTAGGGCTGCTGTTGTCGGCCCAGAAGTGGTGCAGGCCAGAGATTGAGTCCACCACACAAGGCTGAAGCCTTAGGGTTATATGGTCCCACCTGGCACCAGGGTCAGTCTAGAGGCTCAATCCATGGATACTGGTCTGTAGTTTGGACTGTGGGGATCTGCCTGGTGCTGGGTGGTAAGCCCAGTGTTGGGGTAAAAGTCAATGTTCTGTATTCACTTCCCTCTCTTTGCCCCAAGCTGATGGTATCTCTCTCAGCCACTATGCTGCTTAGGTTTGGGGAGGGGTGTCTTGGGTAATATAAAATTGTTCTTCGGACCCTCTTCCATGTGCCTTTTATTGGGCTACAGCCACATTTTCATAGCTCTTGTGAAGGTATTTTCATATGTGGGTAGTTGTTCAAATTGATATTTCTATGGTGGGATGAGCCCTGGAGAGTTCTACTCCACCATCTTGCTCCCAGATTGTCCCTGAAGTCAGCT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_6032:HG4_PB_HySA_9261:HG3_PB_assemblyticsfalcon_21978:HG2_PB_assemblyticsfalcon_22055:HG4_10X_allpass_1209:HG4_PB_assemblyticsfalcon_21527:HG2_Ill_tnscope_734:HG4_PB_pbsv_6229:HG4_PB_SVrefine2PBcRDovetail_3113:HG4_PB_SVrefine2Falcon1Dovetail_3771:HG4_Ill_manta_1566:HG4_Ill_MetaSV_4287:HG4_Ill_GATKHCSBGrefine_4412:HG3_PB_SVrefine2PBcRDovetail_2877:HG3_PB_SVrefine2Falcon1Dovetail_3875:HG3_Ill_manta_1482:HG3_Ill_MetaSV_4304:HG3_Ill_GATKHCSBGrefine_4263:HG3_10X_allpass_1277:HG2_PB_SVrefine2PB10Xhap12_4538:HG2_PB_SVrefine2Falcon1plusDovetail_9815:HG2_Ill_manta_1790:HG2_Ill_breakscan11_915:HG2_Ill_SpiralSDKrefine_14034:HG2_Ill_SVrefine2DISCOVARplusDovetail_10687:HG2_Ill_MetaSV_4127:HG2_Ill_GATKHCSBGrefine_4329:HG2_10X_allpass_1043:HG3_Ill_Krunchall_8713:HG2_PB_pbsv_6209:HG2_Ill_Krunchall_8920;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_1043:HG2_Ill_GATKHCSBGrefine_4329:HG2_Ill_MetaSV_4127:HG2_Ill_SVrefine2DISCOVARplusDovetail_10687:HG2_Ill_SpiralSDKrefine_14034:HG2_Ill_breakscan11_915:HG2_Ill_manta_1790:HG2_PB_SVrefine2Falcon1plusDovetail_9815:HG2_PB_SVrefine2PB10Xhap12_4538:HG3_10X_allpass_1277:HG3_Ill_GATKHCSBGrefine_4263:HG3_Ill_MetaSV_4304:HG3_Ill_manta_1482:HG3_PB_SVrefine2Falcon1Dovetail_3875:HG3_PB_SVrefine2PBcRDovetail_2877:HG4_Ill_GATKHCSBGrefine_4412:HG4_Ill_MetaSV_4287:HG4_Ill_manta_1566:HG4_PB_SVrefine2Falcon1Dovetail_3771:HG4_PB_SVrefine2PBcRDovetail_3113:HG4_PB_pbsv_6229;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0077821;ClusterMaxSizeDiff=0.0077821;ClusterMaxEditDist=0.0077821;PBcalls=13;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-901;DistBack=-243;DistForward=-900;DistMin=-900;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:144871905-144872807;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3268.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:27:0:0:27:./.:0:0:0:0:0/1:42:14:0/1:69:29:.:.:.
chr5	148401433	HG2_Ill_manta_1796	TTCACAAACTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4135:HG4_PB_HySA_9291:HG2_PB_assemblyticsfalcon_22089:HG2_Ill_breakscan11_916:HG3_PB_assemblyticsfalcon_22010:HG4_Ill_Krunchall_9274:HG2_Ill_Krunchall_8952:HG3_PB_SVrefine2Falcon1Dovetail_3885:HG4_PB_pbsv_6246:HG2_PB_pbsv_6224:HG4_PB_SVrefine2PBcRDovetail_3119:HG4_Ill_svaba_8140:HG4_Ill_scalpel_6053:HG4_Ill_manta_1573:HG4_Ill_SVrefine2DISCOVARDovetail_4630:HG4_Ill_MetaSV_4297:HG4_Ill_GATKHCSBGrefine_4424:HG4_Ill_250bpfermikitraw_8848:HG4_Ill_150bpfermikitraw_8465:HG4_10X_allpass_1213:HG2_PB_SVrefine2Falcon1plusDovetail_9823:HG2_Ill_svaba_8026:HG2_Ill_scalpel_6168:HG2_Ill_manta_1796:HG2_Ill_SVrefine2DISCOVARplusDovetail_10702:HG2_Ill_GATKHC_10445:HG2_Ill_GATKHCSBGrefine_4368:HG2_10X_allpass_1046;NumClusterSVs=28;ExactMatchIDs=HG2_10X_allpass_1046:HG2_Ill_GATKHCSBGrefine_4368:HG2_Ill_GATKHC_10445:HG2_Ill_SVrefine2DISCOVARplusDovetail_10702:HG2_Ill_manta_1796:HG2_Ill_scalpel_6168:HG2_Ill_svaba_8026:HG2_PB_SVrefine2Falcon1plusDovetail_9823:HG4_10X_allpass_1213:HG4_Ill_150bpfermikitraw_8465:HG4_Ill_250bpfermikitraw_8848:HG4_Ill_GATKHCSBGrefine_4424:HG4_Ill_MetaSV_4297:HG4_Ill_SVrefine2DISCOVARDovetail_4630:HG4_Ill_manta_1573:HG4_Ill_scalpel_6053:HG4_Ill_svaba_8140:HG4_PB_SVrefine2PBcRDovetail_3119;NumExactMatchSVs=18;ClusterMaxShiftDist=0.170492;ClusterMaxSizeDiff=0.170492;ClusterMaxEditDist=0.177049;PBcalls=8;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-158;DistBack=90120;DistForward=-149;DistMin=-149;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=5:148401434-148401605;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3270.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:21:0|1:43:6:0:9:./.:0:0:0:0:0/1:11:24:./.:.:.:.:.:.
chr5	149148165	HG3_Ill_scalpel_6262	TCTGGCTAATTTTTGTATTTTCTGCCACCTCAGCCTCCTGAGTAGCTGAGACTACAGGCGCCCACCACCATGC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3115:HG2_PB_pbsv_6230:HG3_Ill_svaba_8134:HG3_Ill_scalpel_6262:HG3_Ill_Krunchall_8752:HG3_Ill_GATKHC_10428:HG3_Ill_GATKHCSBGrefine_4283:HG3_Ill_250bpfermikitraw_8479:HG3_Ill_150bpfermikitraw_8293:HG2_Ill_svaba_8038:HG2_Ill_manta_1800:HG2_Ill_SpiralSDKrefine_14081:HG2_Ill_Krunchall_8963:HG2_Ill_GATKHC_10457:HG2_Ill_GATKHCSBGrefine_4375:HG2_Ill_150bpfermikitraw_8241:HG3_PB_pbsv_6051:HG3_PB_SVrefine2PBcRDovetail_2885:HG3_PB_HySA_9642:HG2_PB_SVrefine2PB10Xhap12_4552;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8241:HG2_Ill_GATKHCSBGrefine_4375:HG2_Ill_GATKHC_10457:HG2_Ill_Krunchall_8963:HG2_Ill_SpiralSDKrefine_14081:HG2_Ill_manta_1800:HG2_Ill_svaba_8038:HG3_Ill_150bpfermikitraw_8293:HG3_Ill_250bpfermikitraw_8479:HG3_Ill_GATKHCSBGrefine_4283:HG3_Ill_GATKHC_10428:HG3_Ill_Krunchall_8752:HG3_Ill_scalpel_6262:HG3_Ill_svaba_8134;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0138889;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0827586;PBcalls=6;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-72;DistBack=3535;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=5:149148112-149148258;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3271.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:23:0|1:38:6:4:15:./.:0:0:0:0:0/1:31:18:./.:.:.:.:.:.
chr5	149463923	HG2_PB_SVrefine2PB10Xhap12_4556	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_6232:HG3_PB_assemblyticsfalcon_22025:HG4_Ill_svaba_8152:HG4_Ill_MetaSV_4303:HG4_Ill_GATKHC_10551:HG4_Ill_GATKHCSBGrefine_4435:HG3_PB_SVrefine2Falcon1Dovetail_3893:HG4_Ill_Krunchall_9287:HG2_Ill_Krunchall_8968:HG4_PB_assemblyticsfalcon_21577:HG2_PB_assemblyticsPBcR_21373:HG4_PB_SVrefine2PBcRDovetail_3127:HG4_PB_SVrefine2Falcon1Dovetail_3786:HG4_Ill_svaba_8151:HG4_Ill_SVrefine2DISCOVARDovetail_4634:HG4_Ill_GATKHC_10550:HG4_Ill_GATKHCSBGrefine_4434:HG4_10X_allpass_1216:HG2_PB_assemblyticsfalcon_22106:HG2_PB_SVrefine2PBcRplusDovetail_9163:HG2_PB_SVrefine2PB10Xhap12_4556:HG2_PB_SVrefine2Falcon1plusDovetail_9829:HG2_Ill_svaba_8041:HG2_Ill_breakscan11_919:HG2_Ill_SpiralSDKrefine_14085:HG2_Ill_SVrefine2DISCOVARplusDovetail_10709:HG2_Ill_MetaSV_4140:HG2_Ill_GATKHC_10462:HG2_Ill_GATKHCSBGrefine_4377:HG4_PB_HySA_9311:HG4_PB_pbsv_6254:HG2_PB_HySA_11629;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4377:HG2_Ill_GATKHC_10462:HG2_Ill_MetaSV_4140:HG2_Ill_SVrefine2DISCOVARplusDovetail_10709:HG2_Ill_SpiralSDKrefine_14085:HG2_Ill_breakscan11_919:HG2_Ill_svaba_8041:HG2_PB_SVrefine2Falcon1plusDovetail_9829:HG2_PB_SVrefine2PB10Xhap12_4556:HG2_PB_SVrefine2PBcRplusDovetail_9163:HG2_PB_assemblyticsfalcon_22106:HG4_10X_allpass_1216:HG4_Ill_GATKHCSBGrefine_4434:HG4_Ill_GATKHC_10550:HG4_Ill_SVrefine2DISCOVARDovetail_4634:HG4_Ill_svaba_8151:HG4_PB_SVrefine2Falcon1Dovetail_3786:HG4_PB_SVrefine2PBcRDovetail_3127;NumExactMatchSVs=18;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.142857;PBcalls=14;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-107;DistBack=22178;DistForward=-76;DistMin=-76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=5:149463912-149464033;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3272.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:32:0|1:19:2:0:30:./.:0:0:0:0:0/1:20:26:./.:.:.:.:.:.
chr5	149746191	HG2_Ill_SpiralSDKrefine_14086	GCAACATTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_920:HG2_10X_allpass_1049:HG4_Ill_Spiral_521:HG2_Ill_Spiral_462:HG4_PB_pbsv_6255:HG2_PB_pbsv_6233:HG2_PB_HySA_11630:HG4_Ill_MetaSV_4304:HG2_Ill_tnscope_739:HG4_PB_SVrefine2PBcRDovetail_3128:HG4_Ill_scalpel_6062:HG4_Ill_manta_1577:HG4_Ill_SVrefine2DISCOVARDovetail_4635:HG4_Ill_GATKHCSBGrefine_4436:HG4_10X_allpass_1217:HG2_PB_SVrefine2Falcon2Bionano_3118:HG2_PB_SVrefine2Falcon1plusDovetail_9830:HG2_Ill_scalpel_6182:HG2_Ill_SpiralSDKrefine_14086:HG2_Ill_GATKHCSBGrefine_4378;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4378:HG2_Ill_SpiralSDKrefine_14086:HG2_Ill_scalpel_6182:HG2_PB_SVrefine2Falcon1plusDovetail_9830:HG2_PB_SVrefine2Falcon2Bionano_3118:HG4_10X_allpass_1217:HG4_Ill_GATKHCSBGrefine_4436:HG4_Ill_SVrefine2DISCOVARDovetail_4635:HG4_Ill_manta_1577:HG4_Ill_scalpel_6062:HG4_PB_SVrefine2PBcRDovetail_3128;NumExactMatchSVs=11;ClusterMaxShiftDist=0.05;ClusterMaxSizeDiff=0.05;ClusterMaxEditDist=0.05;PBcalls=6;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=180657;DistForward=-327;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:149746192-149746530;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3273.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:22:0|1:25:0:1:19:./.:0:0:0:0:0/1:18:19:0/1:26:8:.:.:.
chr5	150203161	HG2_PB_PB10Xdip_23343	GAAGATAAAACTTAGAAATAAATCTAACTAAGAGGGTGAAATATCTGTACACTGGAAATTATGAAACATTGATGAAAGAAATTGAAAAGACACAAATAAATGGAAACATATACCAGTTCACGGGTTGGAAGAATTAATATTGTTAAAATGTCCATACTACCCAAAGTGATCTACAGATTCAATGCAATCTCTACAAAATTTCAATGTTATTTTTCACATTAGAGGTAGAAACAATCCAAAAATTTATATGAAACTACCAAAGACACTGCCTGAATAGCCAAAGCAATCTTGAACAGAAAGAACAACATTTGAGGCATTATGCTACCTGACTTCAAAATATATTACAAAGCTATAGTAATTAAAACAGCATAGTATTGTCACACAGACAGACACACAAACCAATGAGACAGAATAAATAATAGAATTAAACCCATGCATTTATGGTCACTTGATTTTTGACAAAGGTATCAAGAAAATACAATGGGGATAAGACACTCTTCAATAAATGGTGTTGGAAAAACTGGATATCCACATGCAGAATAATGAAATTGGACATTTATCTCACACCCTGTATGCAAATCAACTGAAATTAGATTAAATACTTAAATGTAAGACCCGAAACTGTAATAGTCCCAGAAGAAAACATAGGGGAAACGCTCCATGACTTTGTTCTGGGCAATGATTTTTTAGATATAACCCCTAAAGCACAGGCAACAGAAACAAAAATACACAAATGGGACTGTATCAAACTAAAAAGCTTCTGCACAGCATAGGAAGCAAGTAATAGAGTAAAGAGATAACCTACAGAATGGAAGAAAATATTTGCAACATACATCTGAAAAGGGGTTAATATCCAAAATATATAAAGTACTCAAAGTTCAATAATAAGAAAATAAGTAATCCAATTTTAAAAGGGCCCAAATAGATGTTTCTCAAAAGAAGACATATAATTGGGCAACAGGTATATGAAAAAATGTTCAACATCAATAATTATCAGCAAAATGCAAAATAAAACCAAAATGAGACACCATCTCAAATCTGTTAGGATGGTTATTATAAAAAAGACAAGAGGTAACAAGTTTTGGTGAGGATGTGAACAAAAAACCCCTTGTATGCTGCTGGTGGGAATGTAAATTAGTACAGCCATTATGGAAGACACCATGGAGGTTCCTCAGAAAACTATATGATCCAGCAATCCCACTTCTGGGCATATCCAAAGGAACTGAAATCAGGATCAAAGAAACATCTGCACTCCCATGTTCATTTCAGCATTATTCACAATAGCCAAGCTATGGAAGCAACCCAAGTGTCCATCAGTAGATGAATGTATAAAGAAACCATGGTATGCATACCCAATGGAATACTATTTGGCCAGAAGAAAGAATGAAATCAAGTCATCTGCAGCAACATGGATGGAACTGAAGGTTATCATGTTAAGTGAAATAAGCCAGACTCAGAAAGACAACTATTGCATGACCTCACCTATATATGGAATATAAAAAAATAAAACTCATGAAAGTAAAGAGTAGAATAGAAGTCACCAGAGGATGAGGGGAAATACGGAGTCGTTCATCAAAAGGTACAAAATTTCTGTTAGACAGGAAGAACAAGTTTTGAAGATCTATTGCACAGCACAATGACCATAGTTAATAATGTAATGTATATTTCAAAATTGCTAAGAGAGATTTTATGAGCTCATACCACAAATGTTAAATATGTGATGAATATGTTAATTTTAGCTTGATTTAATTATTCCATAATGTATACACATATCAAAACATCACTTTGTATGTCATAAATATATACCATTGTTTTTTGTCAAGTATTTATAAAAAAACTTGTCATGTTAAAAAAGGCACATGCATACCTTCAAACTAGAAAAATTCTACTTATTGTTTCTGGCTTAGAAAAATAATCATAGATGTATGTAAAGATTCATATGTAATAATGTTCATCTTAATATTTTTATACACAATGAAAAGTTGAATATAAGCTAAATGTTTAATTGTAGCTACTAAAAATTAGGTTTTAGAAGAATATTCAATGATATACAAAATAAACATTACATTAAAAAGAAAAAAGAATTGAAAGTAAAGTGATGGAAACATTAACAATTAAAAATTAATCAAGTGAAAACTTTTATAGCTATAATAATACTAAATTGGTCTTTGAGGAAGCACTACTAGTAATGAATAAATTACTTTAATAAAATTATCAATTAAAAGTAATGGCCAGAAATTCTAATTTTATGTAAAATTAATTTCATGGCTTCAAATGTATATATAATGGGATAAGATGACAGAAGTATAATTAAAAAACAAAAGAAATCCAGGTACATAGTTGGAAATCTTAACACAATTCTCTCAACAATAAATAGAAGATAGAAGAGTTAAAAACATTTATATATTTATTCATGAACAACATGAATAATGGACTTAAGAAACTCATATGTAATGATAATTGAATTTAAGTAACATATATAACACTACACTCTCAGCCTAAAAAACACATATTTCTTTCAAGTTTACATGCAACAGATATCTGAAAAGACCATAAACTGGGCCATTATAATGATATTGGGAAAAAAGCTTCTAAGTTTGGAAATTATGCAATATACTGCAAAATAATGCCAAAGAAAATTACGATGAATATTTAAAAATAGTTCATATTTAATGATGATTAAAATATAATATGTTAAATTTGTGGAATGCAGCTAAAGGTGTGCTCAGTAGAAATGTGAAGCTCTAAATACATTTGAAAGGAAAAAAAATTACATAAAAAGTCAGAACCAAATTTATCAGAACTCTGGAAAATGGTCAAAGTTGAGTAACAGCCAAGCAAATGCTGAATGGAGCAAAAGACAGCATAAAAGGTAGAAATTAGTAAGCATTCCTCAAAAACATTGTAATACAACCAAACAATCCACATTCACTTGGTGCAAAATATCAGAACTGAATAAAGTAATAAATACTCAAAAGCATAAAAGGAAAAGCAGGGAACAGAGTTTCTTTAGAAAATTGGGGCACTCAAAAGCACCTATGTGTACTAGGAATTTAGAAAGTCAAGTGCATGCCCAGGGCAGGACATACATTTAGAAAAACACTGAGGAAAAACAGTACAGAAGTTTCCCAAAAAATTAAAAAATAAAACGATTATGTAATCCAGCAATCCCACTACTTGGTATACATCCAAAGGAAATGAAATCAGTATGTCAAAGAAATACATGTACTCTCATGTTTACTGCAGCATTATTTACAATAATTAAGACATGGAAGCAACCTAAGTGTCCATAAAGGGGTGAATGGATATTTTTAAAAATGCGTCCTGTATATACAATGAAATACTATCCAGCCTTAATAAAGAAGGAAATCCTGTCATTTGTGACACCATGGATAAGCCTGGAGGGCATTATGTTAAGTGAAATAAGCCAGGCACAAAAAGACACATACCGCATGATCTTATTTATATGTAGAATCTAAAAAAGTTGATCTCGTGGAAGAAGAGAGCAGAATGGTGGTTTCCTGGGACTCAGTAGTGGGGTGAGAGTTGGGGAGATGTTGGTCAAAGGCTATAAAATTTCAGCTGGGTAAGAAGAATAAGTTCAAGATATCTGTTGTACAACATCATGACTATAGTTAATACCAATGCATTTTTTTCCTTGAAAATTCCTAACGGTAGATTTTGTGGTCTTACCACATACAAAAATGATAAATATGTGAGGTAATATGTATGTTGATTACATTACCATTCCACAGTGTATACATATCTAAAAACATGTTGTACAAAATAAATATATACAATTTTACTTGTCTATGTAAATAAATTAAATAAAGAAAGAAAATAAAATGTATATAATAAAAGAAAATAAGAAGAAAGAACAAACCTGAGAAGACCCTCAACTTTCACCTCTGGCTAACAGCTGGGTCAGTGCAAGCTCTAAGAGAAGGCTAAGGCAGAATTATAAACAGCCTGTTAAGCATTGAAGGAGTGTTCCAGAACTATGCTAATCTGCAATGATTGAGAGAGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTTGTGGTCTTTTATTTCTTCATTTATTTTTGGGAAGGGACTTGAAATGGTACACTAAAAAAATAAACTAAAGTCGTTTATCAGTTCTAGGAGCATTTGGGCAGAGTCTTCAGGGTTTTCTAGTATAGGATCATATTGTCAGAGAAGAGAGATAATTTGATTTCTCCCTTTTCTATGCCGTTTATTTTGTTTTCTCTTGCCTGATCGCTGTGATTAGACTTCCAGTACTATGCTGAATAGGAATGGCGAGAATGAGCATCTTTGTCTTGTTCCAGCTCTCAATGGGAATGCTTTCAGTTGCTGCTCATTCAGTATGACATTGGCTGTGGATTCGTCATAGGTGGCCTTATTATTTTGAGGTATGTTCCTTCAATGAAGTTTGTTGTGGGTTTTTAATCATAAAGGAATGTTGGATTTTATCAAAAGCTTTTTCCTTATAGACTTTAGTAAAATTTCAAGATACAAAATCGATGTACAAAAATTAGTAGCAATTTGATACACTAGTAATATTCAAGCTGAGAGCCAAATCAAGAATGCAATCCTATTTACAATAGCCACAAAAATTAAAATGCCTAGGAATACATCTAACCAAGAGGTGAAAGATCTTTACAAGGAGAACTACAAAACACTGCTAGAAGAAATAATAGATTACACAAACAAATGGAGAAATATTCCATGCTCACAGATTAGCAGAATCAGTATTGTTATAATTGCCAGACTCCCCAAGGCAATCTACAGATTCAGTGCTATTCTTATCAAACTACCAATGTCACTTTTCACACAATTAGAAAAAACTCTTCTAAAATTCATGTGGAACCAAAAAGGAGCCCAGTCAGCCAAAGCCATCCCTAGCAAAAAGAACACAGTCAGAGGCATCACATTACCTGTCTTCAAACCACACTATAAGGGTATAGTAACAAAAACAGCATAGTACTGATACAAAAACAGACACATAGACCAATGCAACAGAATAGAGGACCCAGAAATAAAGCCTTATACCTACTGCTATCTGATCTTCGACAAAGTTGACAAAAACAAGCAATGAGAAAAGGACTCCCTGTTCAATAAATGGTGTTGGGATAGCTGGCTAGCCACACACAAAGGAATGAAACTAGACCCCTAGCCAGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCTGAGGCGGGCAGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAATCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGTGGAGCTTGCAGTGAGCTGAGATCACGCCACTGCACTCCAGCCTGGGCGACAAGGCAAGACTCTGTCTCAAAACAAAACAAAACAAAAAAAAACTAGATCCCTACATTTCACCATATACAAAAATTAGCTCAAGAAGGATTAAAGATATAAATACAAGACTTCAAACTATAAGAATCCTAAAAGAAAACCTAGGAAACACCATTCTGGACAATTGGCTTTGGGAAAGAATTTATGACTAAGTCCTCAAAAACAATTGCAGCAAAAACAAAAATTGACAAGTGAGACCTATTTAAACTAAAGAGTTTCTGCACAGCAAAGGAAACTATCAATAGTGTAATGAGAAAACATACAGAGTGGGAGAAAATGTTCACAAACAATCCATCTGACAAAGGTCTAATATTCAGAACCTGTAGGAAACATAAACAAACCAACAAGCAAAAACCAAACAACCCTATTAAAAAGTGGGCAAAGTCATGAACAGACACTTCTCAAAAGAAGACCTCTAAGTGGCCAACAAGCATATGGAAAAATGCTCAACATTACTAAGCATTAGAGAAATGCACATCAAAACCACAATGAGATACCATCTCACATCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAATAACAGATGCTGGTGAGGCTGCAGAGAAAAGAGAATGTTTACACACTGTTGGTGGGAATGTAAATTATCCCAGCCACTGTGGAAAGCAGGTTGGAGACTTCTCAAAGAACTTAAAATAGAATTACCTTTCGATCCAGTAATCCCATTACTGGGTATATAGCTAAAAGAAAATAAATTATTCTATTGAAAAGACATATGCACTCATATGTTCATCCCAGTACTATTCACAATAGCAAAGACACGGAATCAACCTAGATGTCCATCAACAATGGACGGGATAAAGAAAATGTGGTACATATATATCATGGAATACTATGCAGCCATAAAAAATGAATCACATCCTTTGCAGCCACGTGGATGTTACTGGAGGCCATTATCCTATGCAAATTAATGCAGGAACAGGAAACCAAATACTGCATGTTCTCACTTATAAGTGGGAGTTAAAAAAATGAGTATTTGTGAACATAAAGATGGCAAAAGTAGACACTGAAGAAAGGGCGGAGGAAGGGAGGGGTCCAAGTATAACAAATGATTGGGTACTATGCTCACAACCTGGGTGATGGGATCAATTGTACCCCAAACTTCAGCATCACACAATATACCCAGGTAAGAAACCGCACATGTACCCCCTGAATCTAAAATAAAAGATGAAATAATTTAAAAAATTAAAAATGGACTAAACATAAAAAGAAGGTAGTAATGGAGGAAATGAGAGGGGTAAAGTATAATATAGAAAGAAAAAGTAAAATGGCAAAAATAAGTTCTTCCTTACCAATGATTACTAAATGTAAGTGAATTTAACTCCCCAGTCAAAAAGCAGAGACTCCTATAGAGTCATTTCAGATCTAAAGATACACATAGGCTGAGAGTGAAAGAATGGAAAAACATATTTCATACAAATAATAATGAAAAGAGATCAAGGCAGAAATTTCCCCAATAATAGTTGGATAATTCAATATTCCACTTTCAATAATGGATAAAGCATTCATACAGGAGATCAGTAAGGACCCAGAGACATTGAGCAACACTAAAAACTAAATAGACCTAACAATATAGAACAATACACTCAACCAGAGCAGATTATATATATATTTTCTCAAGAGCACACGGCATATTCTCCAGGATGTTAGGCCACAAAATAGGTCTCAGTGAATTTAAAAATGTTGAAATCACGCAAAGCATCTTTTCTGACTACAAAAAAAAAAACCAAACTAAACAAAACTACAAATCAATAAGAGACGAGGAACTGGAAGATTTACAAATCTGTGGAATTCAACAGCACACTGTTACACATCCAGCAGGTCAAAGGAGAAATCACAATGGAAATTATAAAATACTTAGAGAGGAGTGAGAATAAAAGTACAACATACCAAAACTAATGTGATGTAGGGAAAGGAGTGCTCAAAGGGAAGTTTACAGGTGTGGACACCTACATTAAAAAGAGGAAAAATCTCAAATTAACATAACTTTACACCTTGAAGAACTAGGGGAAAAGGGCAAATGAAACTCAAAGCTAGTGGAAGGAAACAATAAAGATGAGAGTAGAGTTCAATGAAATTGAGATAGATAAACAATAGAGAGAATCAATAAAAACATCAGTTGATTCTTTGAAAAGATTAACAAAATTGACAAACCTTTAGTTAGACCAGCAAAGAAAACCAGAGAAAACACAAATAACTAAATCCAGAAATGAAAGTGAGGACATTACTTACCAACCTTACAGAAATAAAAAAGATTATCAGAGAGAATAATGAAAAATTATTCACCAGAAAATTAAATAACCAAAGGCAATGGACAAATTACTACATACGCAAATGACCAAAACTGACTTAAGCAGAAAAATTGAACAAACCTATAAATGCTAAATGAATTGAATAAATAATCATGAAACTCTCTGTACAGGGTGACATCAGCAAGACTTTTCCAGCTGCTGCTTGAGGGTCTGACACCAGGGAGTTCTAATTTCTGGAGGGATCCAAAAAACAGGAGTAGGAATTTGCATTTTTTATTCTCTATGCCCTTTTGGGGCACCTCCCTTTATCTGCTTGGCTGGGAAACCATGGTTTTTCCCTTGCTGAGGAGACCCACTCATAAGGCAAAGGGCTGTATGGGCCTCTTATCATGAACATATAAATGAACAAATTGTGTGTGTATGTGTGTATGTTGTGCATGTGTTTGAACAATTATTAAATTCAGCACACAGTGTCTGCCCTGAACCAGCACATTACACCAGGGAGTAGATACTCCAGGGACTCCCAAAACACCCACACTTTGGAAGCAGAATGGTCCAAAGTTGTAACCAAAGTTGATCATCCCGTGTGGGATGATCAACACTATGTTTGAAATGCTTGTTTTTTGGTGCTGTAAAGAAATAGCACTTGAACATAAATTTAATTTTCTCAGCAAGGCCATTTTTATACTTTCTGCAGAAAGGGTACACTCGCCAGCAGTTTTGCCACAAGAGTACACTGAACAAAGGAGACAGGGTCATTTATAACTTGATGCGTCCACCTTACTGCTGTGTCTGGTTTCTATTGGCTGGAACAGGACTTCACATTCTGTATTTGTCTTGATTGGCTAGGAACTTAGAACTTTTTAAAAGGGGCAAAGGCAGAGGAGAACAAAGGAAGGAGGTAGTAACTTGTGGAATGCTGAGAAAGGTAAAAACACCTTCAAATAAGGAAGAGGAACAGGCAATGACCTAATGCTTGCTTGGACCAGTATAAGCATGCCAGGGCAAATATTTAGGCTAAATTGTGGGAGCTAAGAACATAAAGTACATTGATTTCTTTATTACGGCTAACAGATATTTAAGGATGTTAGCACAGGTCTTTGAATAAATTTTCCTTCTAAGAGAAGTTACTATTTATTCCTAATTAGATGAGGAGGAAAGTCTTTGAAGAGGAACCTCTACTTTACTTTTCACAATTCCTTCTCTTTTTATTTCATAATTCCTCTTCAAACTTGTTTAATATGTTTTGACTTAATTGCTTTATTTGTCTTTCTAAGAGAAGTAATTTTTCTGAATAGGGTGGAGGAGAGTTAGGAGTTAACTCTGTAAGAGTGGCAGAGACAAATTTTTGTATAAAACTTTGAAAGCAGGGAATAATAGCCTACAAGAATAAGCACACTAATAACAAAAGCTAACAAGGTGAGAATTGAAGTTAAAATTTATTTTTATCCACTTAACTAATACTTTATTATTTTATTATTATTATTATTATTTTTATTTTGTTCTTTATTTATTTATTTTTTTGAGACGGGGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCACTACCACGCCAGCTAATTTTTTTGCATTTTTAGTGGAGGCGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCACCGCTCTTGGCTGTTTTAATATTTTAGAAAAAGGATTATTTATTTTTGAATTTTTGGCAAGTTTATTGGATAGGGCTGTTAATCCTTGTAGCGCTTTTGTTATAGTTCCATCAGGGCAGTATTATTAGGAACAAAGGTACAATATTGAGTTTTAATTATGACACAAACATCTCCTTTTTCTGCTAATATTATATTTAAAGCTATTTTATTTTTCTAGGCCATCTGGCTTAGCTTAGATATCTCTTTGATGTTTAGCAATCTCTTTGATGACGTCCTCAGTGTAATGTATGAATTGTTGCTGATTGTAGTAGATATAGTTTATTTAGTCTACATTTTTTTTTATTTAAAGTTACTTACCAGAAATACGTGGATTCAAATTGTGCAGCTGTTTGATTTTGTGCTTTAAACTTATTTGGCACTTCTCAAAGGACCTTAATAGCATTTATGTAAAACTGAGGATTAAAGGATTCATAAGGAGTTTCTCTTGGCCTGTGGTGCTTTGTTTTTACTTTTTTAGATTGATGAAATGCCAGGGTGAAGGGGATAGCCAATTGGATTAGAGCACAAGTACTGCTCCAATTATTTGGCAGAGTGTCCAGTAAAGGTGCTTCACAGTACCACCATACATTTGCTTGGGGATGGCTAAGCATGGACTGATGGGCAAGCTCTTGGAAAGGCTCGAGCTCCTCGCATCTTTGTGTGCTTCCAAAGAACACCAAATTTTCCTCTTGCCATGAGATGCATAAAGTAAACTTGGCATTTAGAGGTGGAAGCTGGATTGCCTTCAGGGGCTTACCAGCAGAGTGTTGAATTTCAGGAAATAGCAGAGAGAGCTTGGCATGATGGATTATCCTAAGTAATTGGATTCTGAAAAAGAGCCACCATACAGTCCGTATCTGGTCGATGAGGAGACCATCTGAGTGGAAAGAGGATAATCTGGGCCTCTGGCCTACCGTGCATACAAGTTTAATAATCGCTTTTATTTAAAGTGTGAACGGAATATTTAATCCACTCCAGCTACGCATTTGCATCTTGATATTTTGTCTTGATGGCTAAGTTCTGTCTGTCTTAGATCTCTTATTTTTACAATAGACACTCTAGTTTTATTAGATGTAGGAGCGACCAGTGTGGGATCTAGAACTGAGGCTACTGAAGAAGGGGAAGATGGGGGTAATAATGCCCGTTTTGTAGAGTTAGTTAAGGTGGAGGTAGTGACAGAGAGAAGGACAGGGTTACATTGATAAGGCTAGCAGTTAGAAGGGGTAGTCTTTTTAGTGAAATAGATGAAGGGTTTTAGATCTGCACAAACCTTTTTCGTGGAAGTCTAACTTTGCTCCTGAGTAGTTTAAAGGACGTAGTCCTATTTACTACAAGGTTACCAGGCTGTAGGAGCAGAAAATCAGTGTCTTGGCTGCAGGTGATCACAACGATGAGTGCTAGGGGTAACTGTGTCAATTAGAGGGCCAGGATATAAATATTTGTGTGAAAAGGCTAACTGTCGTTGATCTTTTACATTTCCACAAGGTATGATAGAGCAAGCATTAAAGGCAATGGTCTGAGGCAGACTTAGTTACATTAATAACAAAGGAGCTAGTAACAGAATAAGGAAAGAAAAGGAAGCAATATAGAATGTATATGAAAATTAAGCTTTCTTTAACTTAGTAGGGCTTGATCTTAGTACAGTAACCTAAGATGTTTTCTTGACTCGAGTATGGTGGGTCCATTCTTTCTTGGCTGTGCGGATGGCAGTCTCAGTGGTTAACAGCATAAAATAGGGTCCTTCCTAGGCTGGCGTGAATTTTTTTTCTATCTTTTGATGAGGATGTGATTTTTAGGCTGGTGCTGGTGCACTGGAAATTCTAGGGGTGGCACCTGTGCTAAAAGACTTTTAGTTCTGAGGGAAGGGAAAGTGGAAGATAAATTAAGCATATCATTTCTATTGCATATCTTGGGGCTTGAGGCCTCATGGTGATGCCTCCCACTCCATTCCTTCTCAGCGCCGCCCAGGGTACGTGGCGGCCTTGATCCCTCTTAAGGTCTTGGCCATCTTGTGGCCTTCACCGCCCCTGCGCGTTGTGGCCTTGGGGATGAGGGGCCTTGTGACTTACCTGGCCACCTTCAGGCCTTAAGAAAGCTAAACACCATTTTATATTTGACAATGCTTTTTGTATGATTTTATACGAGATAAGTTAAATTTTACCTTCATATTAATGTGCTATTAATGTTAAACTTAATTTTAATAAAATCTTGTAGACATTATTTATCCAATTTTAATGTCTGACTATAAGGTAAGATTTTTATAGACTCTTTTTAACCTTTTATAATTTTTGTTAAAGAGCAGGTTAGTGCTTTAAGAAAAATCTATTGTGCTTTTATTTTAACGTTCAGTTCACAGAAAAACTGGATGATACCTCTTTAACTTTAGCCAATATGTTTACACACAGAATTTCCTTTACAATTAACATTTTAAAACTTGCTTAAACCTTTAAAACAAGTTTTTTAACCTTTTAATATAGGTAAAAATCCATATTCTTATGCCTCCTTATAATCCTGTTATTAAAAGTATATTTTATTTTTCTTACATACTTTGTACATAAACTGTTTTTAAAATAGTTTTACATTCAGAAGGCCTAATTACTTTTAAATTATACAATATTTCTTGCATAAATTCCTTTTTATAACTTTCCTTATGACTTTCACAGACAATCTTCAACATGTCTTAACTTTCTGCCTTCCTTTTACACTATTTCTTTTCTTAGTTTCACCTTCTGGGTCTTTCTTTGATTTCTGTCTCTTCCAGTTTCTCTCTTACTCTTTTATTCTATTTCTCTCTCTCTCATTTGCACTCTTATTTTCCTCTCTCTCATTTGCATTCTATTTTTCTTTCTCTGTCTGTCATCCTCTGTTTCTTTTTTCCTTTCTGAGTTTTCCTGGTCTTGCAGCTGGTGGGGCTGGGCAAAGGCATGGGCCTCGCCCCCAAGTATGCGCTGCCATCTATTTCTCCTGTTTTTATTTTTTTCTGATTTCATTTTTTACTTTTTTTTTCCCTTTCTTCCTACACTTAGTTTCTCAGGCTGGGTGGGATTTGCACGGCTGCAGTCCTGGCCCTGGGCCTTCACCGGCCTTGAGGCTTGGCAGATGCCTGCCGCAACTTGCAAGAATTGTACCTTTTCACCTCTTCTGCTGTCCTCCTGGCACTGGTCCTCACCCTCTTTTTCACACAGAGCTGGGCTGGGGAGAGGGACTTAACTTTAGGTTAGTTAAGTTAAGGTGCCTGGCTGTCTGGCACCATGCTTGCTGTTTTTGCTCTCTTTCTCTCTGAATTTCCTCTCCTAATTTCTTTTTCCTCTCTGCTGGTCTTTCCTTTGCCTCTGCCAGCCACCTATGCTGCTGTTTTCCTCCCTCTCCTTCCTCTTCCTCTAGGGGAGCCACCGGGGAGAGGAGCTTAGCCTTTTTCTTTCCTCGGGAAGAGGGGGAAGGGGAGTTTTGAAAAAAAAAAAAAATATATATATATATATATATATATATATATTTTTTTTTTTTTACTACCAGAGGTTTGTGTGAGGTTCAACCCCCTCTCAATGGGGATTTCTCACCTCTTTTTGAGGTTCAAGCCCCCCTCAATGGGGATTTCTCACCTCTTTTTGAGGTTCAACTTCTACAGTGGGGATTTCTCACCTCTTTTTTGACCTCCAAGACATCCTGACTAAGGAATACTTCACTGCCCCCTGTCGCTTTCTTTCCTTAGTCCTGCCCAAGGAATGCTTTATCGCCCCTGCAGTTTCTCCCTCCTTGGTATGTCCTAACCAAGGAATGCTTTACCACCCTGCAGCTTTTTTTTTAGTCTTGACTACCAAGGAAATAGTTTACTGGCTCTCCTGGTGTTTCTTTCCTTGGTCTGTGCACACAGTTTCCTGGTTTAGGTGATATATGAGGATCTTTTACTCCAGGTCACCGGCCAGTGTTTTTTCTTTTTTTGCATTGCTGAGAGTCCGGGTTTATTTGTCACAGTGGGTGGGTCTCGAGTCCTTATCCCTGAGGCCACTGCAATGAGGCAGAGGAGCATGCTCCTTCATGAGAGAGGACTGGAGACCATCCCCAGAGGAGAATGTATCCCTGTACCAGCCACCAAATTGTTTGAAATGCTTGTTCTTCGGTGCCATAAAGAAATAGCACCTGAACATAAATTTAATTTTCTCGGCAAGGCCATTTTTATACTTTCTGCAGAAATGTTACACTCGCCAGCAGTTTTGCCACAGGAGTACACCGAACAAAGAAGACAAGGTCATTTATAACTTGATGTGTCCACCTTACTACTGTGTCTAGTTTCTATTGGTTGGAACAGGGCTTCACATTCTGTATTTGTCTTGATTGGCTAGCAATCTAGAACATTTTTAAAAGAGGAAAAGGCAGAGGAGAACAAAAGAAGGAGAAAGTAACTTGTGGAATGCTGATAAAGGTAAAAACACCTTCAAATAACGAAGAACAGGCTGTGACCTAATGCTTGCTTGGACCAGTATAAACATGCCAGGGCAAATATTTAGGCTAAATTGTAGGAGCTAAGAACATAAAGTACATTGATTTCTTTATTATGTCTAGCAGATATTTAAGAACGTTAGCACAGGTCTTTGAATAAATTTTGCTTCTAAGAGAAGTTACTATTTATTCCTAATTAGATGGGGTGGAAAGTCTTCGAAGAGGAACTTCTACTTTACTTTTCACAACTGTATGAACCGGTTACAGAAAAGAGAAATGTTCTTTAGAAAGTGACAATCCTTATGGAGAAAGTGGAAAAATCCTGAAATTTACTGCCACACATGCATACTTTCAGAAATTTGCATAATTGTAGAACTCTTCTTCCCATTTGATCACCCCACCCCATCTTTTTGTTCTTTATTTACTATTATTTCAGAGGGATTCAGGAAAACAAGAGAGATAAATGCATGAATTCCACTCTACACTGTGCTATGGTGCCAAATTAAGTCCACTTAGTTGGTGAATTTAAATGGTTTAAAACAACAGTAAAGGGGAGGAGATGTGCTGTAGAAGAAACTGCTTCAGTATCATGAAGTGATTGATAGAAATAGTAGATTACCATTCCAGAGACTGAAGATAAATTTCATGAACACTTCTAATGGATGACTTGGGTCTGGACCTAACAGAATCATTGGAGTCCTTCCTAGAGATGACAGCAATCTTTGTTTCCTACAATTCTTGGTTCTTCCAAGATCCAGCAATAGGGTGTTGATGGTTTAAGACATAAAGACAATATAATTCTTACTTTCATCTCATTTAATCTTAGAGGCATTTGGCCAAGCTATTTTAGTTTAGGTTCTACAAAAGCAATGCCCCCAAAACAAGGACTTGGCTACAGATAGATTATCCTGTGGGTGATCCTGCCTTATTTAACTGGGGCTCAATCCAACACGCATATGCCCCCAAATTGTCCAACTGGGACAATGTGGGCAGCTTGGACCTGGCTCCCAACCCACATTGGTAAAGGTACCCCCCAAATATTTCCTCCTCTCTACTTCTAGGCTGAACATGCACACTGGGCAAATGGGCTCTCTTGGATCTGAAGACTGCTCTACAGCAGAAAAGCAGAGAGACATGTTGGGAGGACACCTAATTCAAGTTAATAGAGTTGGCTGGCCAGTTTACAGACTCTCTCTCTTTCCCTCCCTTGTCAACTTAAGAATTTGGGCAATTGATTCAAAATTCTTGCAAAGGCAGATTTGGGTAACTAGGGTCTATTGCCAGGCTCTATTGATAACAGAGTACATCCTCACTGAGCTTCCTCCTCTGGGTACCAGCAAGCTTCTGGTGTCAATGGTGGGGAGGTCATTATGTGCTCAGGTCCACATCTCTGATGGATAAATATATTGAATATTACCCATGGATACCCAGCTAAAGTCAGCAGCATGAAGAGATGAAGAGTTCAAAAGAGGCAACGACTGAGAAGAGCTAGGATGAAAGAGAACCAGCCTACAACAGATGGGAAGTAACCCTTGTTCCTGGTCATTCCGTCCTCTGTGTCCCTTCTGTCAGGGACCTAGATACACAGCAGGCATGCCCCTGTACCCCTGCCCACTACCCAGTCTCTACGTGAGTTGGATAAGGAGTACTTTATTCTATAGTCTTGGATGAACATCAGCTAGAACAATGGAATAATAATGAGAATTTAAATAACTAAATTCTTCAGGATTTCTTGAATGCCTACACATACATTATCTACTTCAACTTCATAAAGCCTGAATGAAATGAAAATAACTTTAAGATAATGAATCTCAGACACAATGGAGGAAAAGCTCCAGACACTGGCTGAGGAGGACCTAGGACCTCAGCCCATTTGCAGGACACTTTCCTCTTCTATCAGACACCCATGCTCCCCTCCATCTGCAGCCTCCCACACCCAGGGACTAACCATCAGAAAAACGCCTAGTATCTCTTCCCTCACTTGCGAATTCCGCACTAAATGCATCTCTTCTTGCCACCTTTTACTTAACTGGCTGCACTTGACTCAGCCCCCTCTGCTCCTACTGTCTTTCCAAGAAAGTCACATCTGATGGATGTACATTTTTGGGGTTTTGGAAACCGTTGACTGTTGCCACAACAAGGAGGTAAGATGCGCTGGCAAAATCCTTTGGCACCTGCCTTGCTGTGGCTGAGTGGGGCTGGGCTGTAATGGCAAGAGATAGAGGGGCTCTCGTTATGGGTGAAATCTGCATGGGGCTCTTTGCATACTAGGGCACCAGAAGTTTTCTTAGTGTGGCACCCACCGCCCTGAGGGGTATCACTGATGATCAACATCCAAAGAACCTGAGGCCCAAAGCAGAGATAGTAGCTCCAAATCTCTCATTAGATGGAAGACTGAGATTCCCATCTGATTTTTTTTCAAACCAGCCAGAGTATTTGGAACAGAAATGCCTAACTTGCCTGTTAAAAAGTAAGAGAGTGTTGATATTTAAGCTCTGGCTGGAATTTAAGACTCTGGCTTTTTCTTGAAGGCTCCATATATGAAAAAGAAAAGTGAAATCAGATTATGCTTTTTCCTCTTCCCAACAAAGCCAGTATTTCCAAGAGTGAAAGGCTGTCTGTCCAGTACTCAGGCTGCCCGGTGTGGATGGCTCAGTGAGAGAGGGGAGGGTGAGAAGCCATTGGGGCCAAAACTAGGGATCTCAGTGACTGAGAGGAGTGGACAAGTCTTCAGTCAGCAGAGTTGGATTTGGGATGACAGACCAGGATTTCTGGGGTCAGTGCAAAGGCCGGTGAGAGCCTCCTCCTTCCCTTCTCTGCTCAGCCCCTGGGGTCTTCTTCCTCCACAATGAGTACTGGTGAATCTGAACTCTTTTCTCTGCCTATGCTCCACTGAGGGAGACCAGGCCTTTGGGTCCTGGGGACAGAGTGAGATAGAATTAAGGAATCTGCTCTGGAATCACTGAAAGCGACTTGATGTCTTCACATCACTGCCCCCTGCATCACAGCTCCAAAAGGGACACATTATAGTCCCCAAGAATTGGCTGGAATACTACACAGGTTTGTTAATTCTCTGGCCATGCTCAGGGAATATACTGTCTCCCGGTCACGCTCAGGTAATCAGAAGTCCAGACATTCTAATAAACAAGCCCTAGACCCTTGTTGAACTTAAATCTCCCTCGCCCCAGCTCAGTCCTACCTTGGAGTGAGAAATCAGCAGGAGGGACAAGAAAAGAGTCAGCTTCTGGTCTTTTCTTTCCCCTACCTCCTCTGCTATGAGCATCTGATGTTTGGGACCCTTACAAGGTGTCTGTGTGGGAGTGGGGAGGGTGGTAAAGGGTAGAGAAGTGGGGAGAGGAGAGGCAGTGGTGAAAATCAGGACAAGTCTCGCTTGTGATATGGTTGCAATCTGGCTGTAATGGCCTCTGGGGGGTGGTGAATGTTACTGACTATCCTCTAGTATGAGGGACCATGAGGGACCCTCTCTAATATTCCTTTTGGGATCTTTGAGATAGGCAAAGCCCTAATCCGCAGATTTCCTCTCACCTCCTCGGTCTCTGCAACAGGTGAGCCCAGTATCTTTCAACTGAGGTCCTGTTGACTGTGTTCTGCACACTGGGCTCTTCCCTCTAGCCCTTACTGTTGGCCTTTGGTGAAGGCACATCCACGTGCCCTTTCTGCCTCCTCAATCTGACAGTTGTCCTGTTCTGACCTGGGCAAGGAGTTGAGGGGGCAAAGCCAATCTCATAGCTGCATAAGTGGTTTTGCAACTTCTTAGTTCTGTAAATCTCCAGAAAGCAGACATACTATCATCTTACTAGCCTCATAGCCACCTTGTGCTGGGGCATCTCTTCTCTTACTTTAAACACCCTGGGGGCTTATGGTCCCCATTTAAAACAAGGAAATGAGATTCTCTGAGAGGTGAAGCAGATAACCAAGGTCACTGCTAGTATAAACATGCATGTGCAAGTGTCTTTTTCATATAATCACTTCTTTTCCTCTGGGTAGACACCCAGTAGTGGGATTGCTGGGTCAAATGGCAGATCTACTTTTAGTTCTTTGAGGAATCTCCATACTGTTTTGCATAATGGTTGTACTAGTTTACATTCCCACCAGCAGTATAAAAGTGTTCCTTTTCACCACCTGCATGCCAACATCTGTCATTTTTTAATTTTTAAATTATGGCCATTCTTAACAGGAGTAAGGTGGTATCTCATTGTGTTTTTAATTTGCATTTCCCTGATTACTAGGGATGTTGAGCATGTTTTTTCATATGTTTGTTGACCATTTGTCTATCTTCTTTTGAGAACTGTCTATTCATGTCCTCTGCCCCACTTTTTGATGGGATTATTTGTTTTTTTTCTTGCTGATTTGTATGAGTTCCTTGTCGATTCTGGATATTGGTCCTTTGTCAGATGCATAGTTTGCAAAGATTTTCCCCCACTCTGTGGATTGTCTGTTTACTCTGCTGATTATTTCTTTTGCTGTGCAGAAGCTTTTTAGTTTAATTAGGTCCCATTTATTTATTTTTGTTTTTGTTGCATTTGCTTTGGGATCTTAGTCATGAATTCTTTGCCTATGTCAATGTCTAGAAGAATTTTTCGAATGTTATCTTCTAGAATTTTTATGGTTTCAAGTTAGATTTCAGTCTTTGATCTATCTTGAGTTTATTTTATTATTATTATTCTTTTTGAGACGGAGTCTCGCTCTGTCACCAGGCGGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTTTGCCTCCCAGATTCAAGCAATTCTCCTGCCTCGGCCTCCTGAGTAGCTAGGACTACAGGCACGCACCACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCAATCTCTTGGGCTCATGACCCGCCCGCCTCAGCCTCCCAAAGTGCTGCGATTACAGGCATGAGCCACCGCACCTGGCCGAGTTTATTTTTGTGTAAGATGAGAGCTGAGGATCCAGTTTCATTATTCTACATGAATTATCACATTGATTTTTCCCGCAGCCTTTTCTGATAATGATCAAACAGAGGAAAAGCCTGGGATTTGATCCACATTGTTTTCCGGGCACATGGAGTTCTCTGATGCACCAGCCTCCACATCTGTGCTAAGGCCAGGTCTTACTTTGCTATAAGTACCTTTGTTTGGGGATCAAGATAATTGGCATGGAATTAACTATATATAACCTCACATGGGAAATCTATTAATCTGTGTTCTTCATTCTGCATGTTTTACTCATGAAATTAATTCATTGGATTATGACCAGCATTAAAAAACAAACAGATGAAAAACATTCATAGAATGGAATAGGAGTTATAGGGTGTATTTAAGGCAAATTGTTCTGTAATACCTCACATTCACCTGTGTGCAGGTATTTGTGTGCATGTGTACTTGGTTCCTATATGCTCACTTAGTAAATTTAGGAATATGCTCCTTCTAGGATCTGGTTCTTTTTTTTTTTGTATGGCTGCCACTCTGTAATTGAACCTGGTTCCACGACTCCCTTTAGAAGGGCCTCCTCCTCCTCTTCCAAAAGGACTCCTCTGCCCCTGTCTGGAGGAAGGTATCTGGCAATATATCTGGGCAAGATATTCAAAGAGCTGAGCTTGGAGCAATTGTAACCCAGGCTGAATTCTGATGACCTCTTCTAAACTTCCAGGTCAGTGCTCCTGGAGGCTCACCCACACAAACACATAGGCACACTAACAACACCTGGAAGACACACCAACCTCATGCAGAGGAAACCATACCCTCACTGGCCTGGCAGTGACACAGGGGCCTGGGCAGGCATAGCACAGAAGAGTCCTGGTGTAACTGAGATAAAGTATCTCAATTGTACAAATAATTATTTTCGGCTCGGTTGTCTCTAGCGTGCAGCTGGTGAGCCTTCACCATGGGCCCAGGAGAAGCGGATCATATGAACAAGGCCTGGGGATGGGACAGTTGAGCTGGGGCTGCAGGGGCTAAGGCTGTTTCCCATGGGGCTCAGCACTGGTGGACAGGTAAGCAGACAGGTTTGAAGATGCTGGCTCAGTTCAC	AAATAGA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4142:HG4_PB_pbsv_6256:HG2_PB_pbsv_6234:HG4_Ill_Krunchall_9290:HG4_PB_SVrefine2Falcon1Dovetail_3787:HG2_PB_SVrefine2PBcRplusDovetail_9164:HG2_PB_SVrefine2PB10Xhap12_4557:HG2_PB_SVrefine2Falcon2Bionano_3119:HG2_PB_PB10Xdip_23343:HG2_Ill_tnscope_740:HG2_10X_allpass_1050:HG4_Ill_MetaSV_4305:HG2_Ill_Krunchall_8969;NumClusterSVs=13;ExactMatchIDs=HG2_PB_PB10Xdip_23343:HG2_PB_SVrefine2Falcon2Bionano_3119:HG2_PB_SVrefine2PB10Xhap12_4557:HG2_PB_SVrefine2PBcRplusDovetail_9164:HG4_PB_SVrefine2Falcon1Dovetail_3787;NumExactMatchSVs=5;ClusterMaxShiftDist=0.010199;ClusterMaxSizeDiff=0.010199;ClusterMaxEditDist=0.010199;PBcalls=7;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=-20096;DistBack=10706;DistForward=-13262;DistMin=-13262;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=5:150203161-150223263;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9999;PctRecOverlap=0.9996;SizeDiff=2;StartDistance=-8;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3274.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:95:55:0|1:83:1:2:29:./.:0:0:0:0:0/1:72:19:0/1:460:177:20039:.:.
chr5	150789733	HG2_PB_SVrefine2PBcRplusDovetail_9166	CTGTCTGAGGGCAGGAACTTTATCTGATTTGTTCACGGCTGTATTACCAGCACAGTGGCCAGCTCAAGGATATTCAATATGTATTTGTTCAATGAATTCATTCATTCATTGAAAGAGAGTGGTGAAATTCTGAACAGGGACAGAGAGATGACCTAGGCATCTTTTTTTTTTCCAAATATGGATTTTGTTTTATGATGGTGAAAATATAAACAAACAAATATAAAATATAAAGAGAGAAAAATTATCTTTGGAGACTCTTTACAGAGTTTTTTGTATTGTTTATGATATCAATAACATAAAATAAAATGGAAATAACCAAAATGTCTGTCCTTAAGGACTTGGTGAATAAATTATATATGGCGAGTCCATGATATATCATTAAGCATGGAAAAAAGCAAATAGCATATCAATATCATAGTCTGAAAAATTATTATATATGCATGTTTGAATATTTATGAAAAAAACTGAAAAACTATTCACATAACTTTCGCCTTTTATTTTTTATTCCCTCATTTTACTGATGGTCACATAACTTTTAATGTGTGTTTTTGCAGGAGGAGAAATTTATGGAGACCTTTTATATTTTATAGTCTCATGCTATTGTTTGCATGAGATGCAACTGTATCAAGAGTTTCTCAACCTCAGCACTCTTGACATTCAGGGCCAGATAATTCTTGGTTGGGAGGGACTGTCCTGTGCATTGCAGGCTATTTTACAGCATCTCTTGCTTCTATCCGCTGTGTGACAACGAAAAATATCTCCAGCAATTGCCAAATGTCCACTGGAGAGCAAAGTCATTTCCAATTAAGAACCACTGGTCTAAAGTCTATACTTGTACCCATTCTGCTGACTCTAAGAACTACTGTGTTCTCACTTGTAGTTTTACACCAAAACAGCCTATCAAGAGAGAAGTTACTAGCCTTATTTTAAAAGTGTGACTTATCCAGGGTCACAGAGCTTATAAGCAGCAAAGCTAGGACTCATATTCACATTTCAAACCTATCCGTTGATTCTCATCCATGGTGGGTGTCAGGAGGAAGATTTCTGCCTCATAAATGAGCAAAGCAGAAGGAGAAATATTTACTCCCGATTTATCTTATTTCTTCAAGGCTTTGTCATGGATACCTACGGGATGATCTGCTCAGCAACCATCACCCACATGCCTTAAGTGACCTGAACTCCTTCTGTATCAGGTATAGTTTCTATTGGTGTTGCCCCCAACTATAGGAGATTGATCCAGGGGTGGCACCTGACCTGAGCTGAACCAATGAATTCCTTTCCTGAAATTTTGAGACCTGAGAGAACATCAGATTAGTCTCCTTCTGGTGGCTAAATTGTAAAATGTAAAACTCAGAAGCTGTGGACAGAGCCAGCTCACATTAAGAGAGAGGTATAAAGCCAATACACAGAGCCAAACTGAGCAAAGGCTTCGGGAGCCCTAATGGGGGTCCACCCCTGAGTTGGTGTGACCTGCAAAGACTGACTGCCTCAGGATCCTTTTAGGGCTTGACTGTTCCTTGACACCTCCCAGAATCTTTCTAATAGTCTCTTTTTCCCCCAGTTACTTCAACTTGAGTTGAACAAGGGTCCTTAGTACAGTTTTTCCCACGGATAAGAAAATACCTGCTTGTTGAAACCAAACCAAACCAAACCAAACCTCCTTCATAGCATTAATATGCTCTAAAAATCTGATGATCTGGGCAAATCACTGACAACCAAGTTCCTACTATTTTAAATAGGAGAAATTGTGACATGAACATCCACCCCAAATACTCAACCATTTCTTAAGACGTAACTAAAACAAGTAAAATGCCTGTATGTAAGCAACAAACTATGACGTTAGTCTATGAATGCTTAAAACTTGATACTAAACACAAATGAATATGGTTGTCACAAGAAATTGCTTTTGTCTGCAAACATCCTCCACATCCTCTTTGTGGATGCTTGTTCTCTTTCCAAACTGTCTGTGTGGGTCCTAACATTTAACTAAATCTGTAAGGTAAGACAATGTAAGGAATGTCTCAAGATATTTCCCATGGGTTGTTTTGTTAAATATGTTATATTGCATTTGGGGACAGAAATGTAAATATTTCCTATATAAACATGGGGAAAAATTATAATGAGAGAGATATATTCATTCCCCGGAGTTTGGGCATTATGCAGAAATTTTCTGTGTGATAATTCCATATATATGTCAAACAATAGAGACACATATAGGAAAATATACAACAACCTGAACTTTCCCTCTCTAGAGGAAATCATTGACAATCTGGAGGATGTGTTTCCAGGCTTTGTTCTACATACACACACATACACACGCACACCCTTCTCAAGGTGACTGCATGGGGTGGGGAATCTACCTGGAGGAGATGCTGGAGGATGAGGACGAGGCTTCCCAGCGTGAAGACTTTGTTCAGCATCTAGAAAGTAGGCAGCGCACAGAGGCTCTGGAGGAACACCAGCAGCACCAGCAAGGGAAATGTGAACACTGTGTAGATGTGACATCCACGGTGGGTGTGGGAATCGCCACGCCTCTGCCCTGGCAGTCAGCTATGATCTCATCAGTTGTCTTGATCACCTATGGATAAAAAAGGATGATGTGAACCTTAGCTGCGACCTGCCTGTTCCCATCCCTATGTCCTCCAGCCATTCCTGTCAATCTTCAGCCCTTAAAAGCACCAGCATCTGGAGATTTTCTCACTGCCAAAAACCTTGTCTCCCAAAATTCCCTTCTTAGTGACTGCTCAGCCTTCAGAGTCAATGTTCCCTCCAAACTCCATCAGACCCCTACTCTTATAGCACCAGTCCATTGCCTCAATAGGGCTTATCATGCTTTGTCATTTTACACTAGCATGATTATTGCTAAATGTTTATCTTTCCCACTAGAATGTAAG	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_3789:HG4_PB_pbsv_6259:HG2_PB_pbsv_6237:HG4_10X_allpass_1219:HG2_10X_allpass_1051:HG2_Ill_MetaSV_4143:HG4_Ill_MetaSV_4306:HG4_PB_pbsv_6258:HG4_PB_SVrefine2PBcRDovetail_3130:HG4_Ill_SVrefine2DISCOVARDovetail_4641:HG3_PB_SVrefine2Falcon1Dovetail_3894:HG2_PB_pbsv_6236:HG2_PB_SVrefine2PBcRplusDovetail_9166:HG2_PB_SVrefine2PB10Xhap12_4559:HG2_PB_SVrefine2Falcon1plusDovetail_9831:HG2_Ill_SVrefine2DISCOVARplusDovetail_10711;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10711:HG2_PB_SVrefine2Falcon1plusDovetail_9831:HG2_PB_SVrefine2PB10Xhap12_4559:HG2_PB_SVrefine2PBcRplusDovetail_9166:HG2_PB_pbsv_6236:HG3_PB_SVrefine2Falcon1Dovetail_3894:HG4_Ill_SVrefine2DISCOVARDovetail_4641:HG4_PB_SVrefine2PBcRDovetail_3130;NumExactMatchSVs=8;ClusterMaxShiftDist=0.133378;ClusterMaxSizeDiff=0.133378;ClusterMaxEditDist=0.133378;PBcalls=10;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-2893;DistBack=1171;DistForward=-2822;DistMin=-2822;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=607;REFWIDENED=5:150789734-150793233;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:49:0|1:46:6:0:19:./.:0:0:0:0:0/1:70:23:0/1:233:108:2784:.:.
chr5	151456413	HG4_Ill_MetaSV_4307	TCAAAATTACATGGTGGAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCAGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCCAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATAGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAATTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTCCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGTGCCTCTCCTCCTCCAAAGGAATGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGATGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGTGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTCGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGCAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACAAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGTGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_921:HG4_Ill_Krunchall_9299:HG3_Ill_Krunchall_8762:HG2_Ill_Krunchall_8978:HG3_10X_allpass_1282:HG4_PB_assemblyticsfalcon_21584:HG2_PB_assemblyticsPBcR_21380:HG2_PB_assemblyticsfalcon_22115:HG4_10X_allpass_1220:HG2_10X_allpass_1052:HG2_Ill_tnscope_741:HG4_PB_pbsv_6261:HG4_PB_SVrefine2PBcRDovetail_3132:HG4_PB_SVrefine2Falcon1Dovetail_3791:HG4_Ill_SVrefine2DISCOVARDovetail_4645:HG4_Ill_MetaSV_4307:HG4_Ill_GATKHCSBGrefine_4439:HG3_PB_pbsv_6054:HG3_PB_SVrefine2PBcRDovetail_2886:HG3_Ill_SVrefine2DISCOVARDovetail_4759:HG3_Ill_MetaSV_4317:HG2_PB_pbsv_6239:HG2_PB_SVrefine2PBcRplusDovetail_9168:HG2_PB_SVrefine2PB10Xhap12_4561:HG2_PB_SVrefine2Falcon2Bionano_3121:HG2_PB_SVrefine2Falcon1plusDovetail_9833:HG2_Ill_SVrefine2DISCOVARplusDovetail_10715:HG2_Ill_MetaSV_4144:HG2_Ill_GATKHCSBGrefine_4380;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4380:HG2_Ill_MetaSV_4144:HG2_Ill_SVrefine2DISCOVARplusDovetail_10715:HG2_PB_SVrefine2Falcon1plusDovetail_9833:HG2_PB_SVrefine2Falcon2Bionano_3121:HG2_PB_SVrefine2PB10Xhap12_4561:HG2_PB_SVrefine2PBcRplusDovetail_9168:HG2_PB_pbsv_6239:HG3_Ill_MetaSV_4317:HG3_Ill_SVrefine2DISCOVARDovetail_4759:HG3_PB_SVrefine2PBcRDovetail_2886:HG3_PB_pbsv_6054:HG4_Ill_GATKHCSBGrefine_4439:HG4_Ill_MetaSV_4307:HG4_Ill_SVrefine2DISCOVARDovetail_4645:HG4_PB_SVrefine2Falcon1Dovetail_3791:HG4_PB_SVrefine2PBcRDovetail_3132:HG4_PB_pbsv_6261;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00547536;ClusterMaxSizeDiff=0.00547536;ClusterMaxEditDist=0.00547536;PBcalls=13;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-6034;DistBack=78039;DistForward=20856;DistMin=20856;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=5:151456414-151462464;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3276.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:116:1/1:2:17:0:34:./.:0:0:0:0:1/1:0:29:1/1:1:445:6008:.:.
chr5	152128186	HG2_Ill_Krunchall_8984	AATACCCAGTAATGGTATTACTGAGTATATACCCAGTAATGGTATTACTGAGTAT	A	20	PASS	ClusterIDs=HG3_PB_HySA_9651:HG2_PB_assemblyticsPBcR_21386:HG2_PB_pbsv_6242:HG3_PB_pbsv_6057:HG3_PB_SVrefine2Falcon1Dovetail_3897:HG3_Ill_svaba_8156:HG3_Ill_manta_1489:HG3_Ill_Krunchall_8769:HG3_Ill_GATKHCSBGrefine_4287:HG3_Ill_250bpfermikitraw_8495:HG3_Ill_150bpfermikitraw_8308:HG2_PB_SVrefine2PB10Xhap12_4564:HG2_Ill_svaba_8056:HG2_Ill_manta_1804:HG2_Ill_SpiralSDKrefine_14094:HG2_Ill_Krunchall_8984:HG2_Ill_GATKHCSBGrefine_4385:HG2_Ill_250bpfermikitraw_8803:HG2_Ill_150bpfermikitraw_8259;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8259:HG2_Ill_250bpfermikitraw_8803:HG2_Ill_GATKHCSBGrefine_4385:HG2_Ill_Krunchall_8984:HG2_Ill_SpiralSDKrefine_14094:HG2_Ill_manta_1804:HG2_Ill_svaba_8056:HG2_PB_SVrefine2PB10Xhap12_4564:HG3_Ill_150bpfermikitraw_8308:HG3_Ill_250bpfermikitraw_8495:HG3_Ill_GATKHCSBGrefine_4287:HG3_Ill_Krunchall_8769:HG3_Ill_manta_1489:HG3_Ill_svaba_8156:HG3_PB_SVrefine2Falcon1Dovetail_3897;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.037037;PBcalls=6;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=-55;DistForward=68613;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=62;REFWIDENED=5:152128187-152128302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:29:0|1:16:2:4:25:./.:0:0:0:0:0/1:19:14:./.:.:.:.:.:.
chr5	152986428	HG3_10X_allpass_1283	AGTACTTTAAGATGTTTTTCATCCTGATTATGAAATAATAAAGTATGTGTAATTTTCTTTTCTTACAATACCCTTGTTCAATTTGGTATTCAG	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_922:HG4_PB_pbsv_6265:HG2_PB_HySA_11651:HG4_PB_assemblyticsfalcon_21603:HG2_PB_assemblyticsPBcR_21396:HG4_PB_SVrefine2Falcon1Dovetail_3794:HG4_Ill_svaba_8172:HG4_Ill_Krunchall_9310:HG4_Ill_GATKHC_10575:HG4_Ill_GATKHCSBGrefine_4444:HG4_Ill_Cortex_3021:HG4_Ill_250bpfermikitraw_8881:HG4_CG_vcfBeta_4127:HG4_10X_allpass_1221:HG3_PB_pbsv_6060:HG3_PB_assemblyticsfalcon_22047:HG3_PB_SVrefine2PBcRDovetail_2889:HG3_PB_SVrefine2Falcon1Dovetail_3900:HG3_Ill_svaba_8167:HG3_Ill_scalpel_6282:HG3_Ill_manta_1491:HG3_Ill_SVrefine2DISCOVARDovetail_4768:HG3_Ill_Krunchall_8781:HG3_Ill_GATKHC_10462:HG3_Ill_GATKHCSBGrefine_4290:HG3_Ill_Cortex_3042:HG3_Ill_250bpfermikitraw_8501:HG3_Ill_150bpfermikitraw_8321:HG3_CG_vcfBeta_3514:HG3_10X_allpass_1283:HG2_PB_pbsv_6245:HG2_PB_SVrefine2PBcRplusDovetail_9172:HG2_PB_SVrefine2PB10Xhap12_4567:HG2_PB_SVrefine2Falcon2Bionano_3123:HG2_PB_SVrefine2Falcon1plusDovetail_9837:HG2_Ill_svaba_8066:HG2_Ill_scalpel_6202:HG2_Ill_manta_1807:HG2_Ill_SpiralSDKrefine_14101:HG2_Ill_SVrefine2DISCOVARplusDovetail_10721:HG2_Ill_Krunchall_8997:HG2_Ill_GATKHC_10498:HG2_Ill_GATKHCSBGrefine_4388:HG2_Ill_Cortex_7331:HG2_Ill_250bpfermikitraw_8814:HG2_Ill_150bpfermikitraw_8271:HG2_10X_allpass_1053:HG2_10X_SVrefine210Xhap12_4505:HG2_PB_assemblyticsfalcon_22128;NumClusterSVs=49;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4505:HG2_10X_allpass_1053:HG2_Ill_150bpfermikitraw_8271:HG2_Ill_250bpfermikitraw_8814:HG2_Ill_Cortex_7331:HG2_Ill_GATKHCSBGrefine_4388:HG2_Ill_GATKHC_10498:HG2_Ill_Krunchall_8997:HG2_Ill_SVrefine2DISCOVARplusDovetail_10721:HG2_Ill_SpiralSDKrefine_14101:HG2_Ill_manta_1807:HG2_Ill_scalpel_6202:HG2_Ill_svaba_8066:HG2_PB_SVrefine2Falcon1plusDovetail_9837:HG2_PB_SVrefine2Falcon2Bionano_3123:HG2_PB_SVrefine2PB10Xhap12_4567:HG2_PB_SVrefine2PBcRplusDovetail_9172:HG2_PB_pbsv_6245:HG3_10X_allpass_1283:HG3_CG_vcfBeta_3514:HG3_Ill_150bpfermikitraw_8321:HG3_Ill_250bpfermikitraw_8501:HG3_Ill_Cortex_3042:HG3_Ill_GATKHCSBGrefine_4290:HG3_Ill_GATKHC_10462:HG3_Ill_Krunchall_8781:HG3_Ill_SVrefine2DISCOVARDovetail_4768:HG3_Ill_manta_1491:HG3_Ill_scalpel_6282:HG3_Ill_svaba_8167:HG3_PB_SVrefine2Falcon1Dovetail_3900:HG3_PB_SVrefine2PBcRDovetail_2889:HG3_PB_assemblyticsfalcon_22047:HG3_PB_pbsv_6060:HG4_10X_allpass_1221:HG4_CG_vcfBeta_4127:HG4_Ill_250bpfermikitraw_8881:HG4_Ill_Cortex_3021:HG4_Ill_GATKHCSBGrefine_4444:HG4_Ill_GATKHC_10575:HG4_Ill_Krunchall_9310:HG4_Ill_svaba_8172:HG4_PB_SVrefine2Falcon1Dovetail_3794;NumExactMatchSVs=43;ClusterMaxShiftDist=0.124294;ClusterMaxSizeDiff=0.124294;ClusterMaxEditDist=0.124294;PBcalls=15;Illcalls=28;TenXcalls=4;CGcalls=2;PBexactcalls=10;Illexactcalls=27;TenXexactcalls=4;CGexactcalls=2;HG2count=22;HG3count=16;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-92;DistBack=29709;DistForward=94658;DistMin=29709;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:152986429-152986522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3278.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:./.:0:4:0:3:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr5	153529050	HG2_Ill_GATKHC_10505	GAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAA	G	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_14103:HG3_PB_HySA_9667:HG3_PB_pbsv_6064:HG2_PB_pbsv_6247:HG3_Ill_GATKHCSBGrefine_4292:HG3_Ill_150bpfermikitraw_8329:HG3_Ill_manta_1492:HG2_Ill_manta_1808:HG2_Ill_Krunchall_9003:HG2_Ill_GATKHC_10505:HG2_Ill_GATKHCSBGrefine_4390:HG2_Ill_250bpfermikitraw_8819:HG2_Ill_150bpfermikitraw_8277;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8277:HG2_Ill_250bpfermikitraw_8819:HG2_Ill_GATKHCSBGrefine_4390:HG2_Ill_GATKHC_10505:HG2_Ill_Krunchall_9003:HG2_Ill_manta_1808:HG3_Ill_manta_1492;NumExactMatchSVs=7;ClusterMaxShiftDist=0.206897;ClusterMaxSizeDiff=0.206897;ClusterMaxEditDist=0.206897;PBcalls=3;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-70;DistBack=-23;DistForward=-52;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=204;REFWIDENED=5:153528999-153529272;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3279.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:0|1:26:4:5:23:./.:0:0:0:0:0/1:20:22:./.:.:.:.:.:.
chr5	153805302	HG4_PB_SVrefine2Falcon1Dovetail_3796	AGTAATCCAGCACTTTGGGAGGCCGAGGCAGGCAGCTCACCTGAGGTCAGGAGTTGGAGACCAGTCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCGGGCACCTGTACTCCCAGCTACTTGGGATGCTGAGGCAGGAGAATCACTTGGACCTGGGAGGTGGAGGTTGCGGTGAGCCAAGATCATGCCACTGCACTCCAGTCTGGGCAACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAATGGCACTAGGACAATTGTATATCCACATACAAAAGAATGGATTTGTACCTTTACCTCACACTACATACAAAAATTACCTTAAAATGGATAAAAGACTTAAATGTAAGAGTGAAAACTAAAAAATTTATAGAATAAAGAATAAATGTTAATCTTTGTGACCTTAAATTGGACAATCGTTTCCTAAAATATATTAAAAACACAATCAACTAAAGAATAAATAAATTGGACTTCATTGATTTAAAATTAAATTTTAAAATTACTTATTAAATTTTAAATTAAGTTGGGTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGGTCTCAGCTCACTGCAGCCTCCACCTCCCGGGTTCAAGCAATTCCCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGTGTGCCACAACACCCGGTTAGTTTTTGTGTTTTTAGTAGAGATGGGGCTTCACCATGTTAGCCAGGATGGTCTTGATCCCCTGACCTCATGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGCCATGAGCCACTGCACCTAGCCTTAAAATTAATTAGTAAATTTTAAATTAAGTTTTAAAATTAATTATTAAATTTCAAATTAAATTTTAAAATTAAATTAAAATCAAATTAAAAACTATTGTGCCTCAATGTACACTATTAAGAAAGTGAAAAGAGGCCAGGTGCGGTGGCTCCCACCTATAATCCCAGCACTTTGGGAGTCTGAGGTGGGCAGATCACTTCAAGTCAGGAGTTCAAGAACATCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGTCAGGAGTGGTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGCATCACTTGAACCCAAGAGGCGGAGGTTGCCGTGAGCCAAGATCATGCCATCTCACTCCAGCCTGGGTGACAGAGCGAGGCTCTGCCTTGAAAAAAAAAAAGAAAAAAGAAGGAAAAGAAAAGAAATAAAAAGAAAACAGAAAAAAACTCACAGAATGAGAAAATATTTTCAGATTATATTTGACAAGCGTCTGGTATCCAAAATATATAAAGGGATCTCTGGCAATACAACAATCAAAAGATGAATAAGCCAAGCAAAGATTTGAACACACATATCTACAGCCAACTGATCTTTGACAAAGTCAACAAAAATATACACTGCAGAACGGACACCCTTTTCAACAAATGGTGCTGAGAAAATTGGATTGCCATATGCGGAAGAATGAAACTGGACCCTTATCTCTCACCATGTAAAAATCAATTCAAAATAGATTAAAGACTTGAATGTAGTACATGAAACTATAAAAATACTACAAGAAAAACTAGGGGAAACTCTTCTAGACATTGATCTAGGCAAAGAATTCATGACTAAGACCTCAAAAGCACAGGCAACAAAAACAAAAATAGACAAATGGGACTTTTAAAAGTTCTGCATAGCAGGCCAGGCGCAGTGGCTCATGCCT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4508:HG3_10X_allpass_1284:HG3_PB_pbsv_6065:HG3_Ill_MetaSV_4321:HG2_PB_pbsv_6248:HG2_PB_HySA_11658:HG2_Ill_SpiralSDKrefine_14105:HG2_Ill_MetaSV_4148:HG2_Ill_tnscope_742:HG4_PB_SVrefine2Falcon1Dovetail_3796:HG3_PB_SVrefine2PBcRDovetail_2892:HG2_PB_SVrefine2PBcRplusDovetail_9174:HG2_PB_SVrefine2PB10Xhap12_4569:HG2_PB_SVrefine2Falcon2Bionano_3125;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4508:HG4_PB_SVrefine2Falcon1Dovetail_3796:HG3_PB_SVrefine2PBcRDovetail_2892:HG2_PB_SVrefine2PBcRplusDovetail_9174:HG2_PB_SVrefine2PB10Xhap12_4569:HG2_PB_SVrefine2Falcon2Bionano_3125;NumExactMatchSVs=6;ClusterMaxShiftDist=0.179787;ClusterMaxSizeDiff=0.179787;ClusterMaxEditDist=0.179787;PBcalls=8;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-1830;DistBack=29231;DistForward=-1757;DistMin=-1757;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=270;REFWIDENED=5:153805303-153807402;PctSeqSimilarity=0.9116;PctSizeSimilarity=0.9995;PctRecOverlap=0.9601;SizeDiff=1;StartDistance=-73;EndDistance=-72;GTMatch=0;TruScore=95;MatchId=3280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:35:0|1:36:1:2:26:./.:0:0:0:0:0/0:72:2:0/1:140:68:1673:.:.
chr5	154315917	HG2_Ill_GATKHCSBGrefine_4394	CAGTGAGCCAAGATCCCGCCATTGCACTCCAGCCTGGGCGACAGAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAGTAATTAATA	C	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_21605:HG3_PB_HySA_9672:HG4_PB_pbsv_6269:HG4_Ill_svaba_8185:HG4_Ill_scalpel_6086:HG4_Ill_manta_1581:HG4_Ill_Krunchall_9321:HG4_Ill_GATKHC_10586:HG4_Ill_GATKHCSBGrefine_4449:HG4_Ill_250bpfermikitraw_8892:HG4_Ill_150bpfermikitraw_8503:HG4_CG_vcfBeta_4134:HG4_10X_allpass_1223:HG3_PB_pbsv_6066:HG3_PB_assemblyticsfalcon_22055:HG3_Ill_svaba_8178:HG3_Ill_scalpel_6294:HG3_Ill_Krunchall_8793:HG3_Ill_GATKHC_10478:HG3_Ill_GATKHCSBGrefine_4295:HG3_Ill_250bpfermikitraw_8512:HG3_Ill_150bpfermikitraw_8335:HG3_CG_vcfBeta_3518:HG3_10X_allpass_1286:HG2_PB_pbsv_6251:HG2_PB_assemblyticsfalcon_22132:HG2_PB_assemblyticsPBcR_21401:HG2_Ill_svaba_8078:HG2_Ill_scalpel_6215:HG2_Ill_manta_1809:HG2_Ill_SpiralSDKrefine_14109:HG2_Ill_Krunchall_9010:HG2_Ill_GATKHC_10511:HG2_Ill_GATKHCSBGrefine_4394:HG2_Ill_250bpfermikitraw_8825:HG2_Ill_150bpfermikitraw_8282:HG2_CG_vcfBeta_3678:HG2_10X_allpass_1055;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_1055:HG2_CG_vcfBeta_3678:HG2_Ill_150bpfermikitraw_8282:HG2_Ill_250bpfermikitraw_8825:HG2_Ill_GATKHCSBGrefine_4394:HG2_Ill_GATKHC_10511:HG2_Ill_Krunchall_9010:HG2_Ill_SpiralSDKrefine_14109:HG2_Ill_manta_1809:HG2_Ill_scalpel_6215:HG2_Ill_svaba_8078:HG2_PB_assemblyticsPBcR_21401:HG2_PB_assemblyticsfalcon_22132:HG2_PB_pbsv_6251:HG3_10X_allpass_1286:HG3_CG_vcfBeta_3518:HG3_Ill_150bpfermikitraw_8335:HG3_Ill_250bpfermikitraw_8512:HG3_Ill_GATKHCSBGrefine_4295:HG3_Ill_GATKHC_10478:HG3_Ill_Krunchall_8793:HG3_Ill_scalpel_6294:HG3_Ill_svaba_8178:HG3_PB_assemblyticsfalcon_22055:HG3_PB_pbsv_6066:HG4_10X_allpass_1223:HG4_CG_vcfBeta_4134:HG4_Ill_150bpfermikitraw_8503:HG4_Ill_250bpfermikitraw_8892:HG4_Ill_GATKHCSBGrefine_4449:HG4_Ill_GATKHC_10586:HG4_Ill_Krunchall_9321:HG4_Ill_manta_1581:HG4_Ill_scalpel_6086:HG4_Ill_svaba_8185:HG4_PB_pbsv_6269;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0116959;ClusterMaxSizeDiff=0.0116959;ClusterMaxEditDist=0.0233918;PBcalls=8;Illcalls=24;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=3;HG2count=14;HG3count=12;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-85;DistBack=26800;DistForward=22038;DistMin=22038;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:154315916-154316003;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:62:1/1:2:23:1:22:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr5	155311783	HG2_Ill_breakscan11_923	TTAATCTATAAAAATGGGAATAGTAATAGCATGTAACCTATAAGAACTTGTGATAATTAAATGAAAAGCATGTAACAAACAACGCAGTACCTGACAAATAATACATGATCAATAAGTAGGCTAATGATGAAGACGATAATGACAACGACGATAACTGCCATGACATGTTTTGTGTAAGTATTTTCTCTGTAACCTTTGTCAAAGTAAGAATAATGTCTGATACTTTGTTTCTATTCTTCTCTTCATAGCATTTAGCATAAATGTATTTCATGAGTGAAAGAACATGTACTTATTTAATAAACAAGAATTGATATCCAGAAAGTCTAAGGTGATCCACTCTTCGTGCTAGAGATCATCTATGGTCTATTTGGGTAGATGGTATATGTTCACTTTTTGGTCATTCAGTAAACAGCCAATAATTCCTTAGGTACTAGATGTTGTAGGAGGTGCTGAGAAAGAATACAGAGACAAAGGACAGAGTTCCTGCTTTTAATAAGTTCACAGCTTAGTATGGCCAAACAGATATTGATGTAACATATGCATTGAGACAGAAGCAGGCAAGCATAAAAATATCAAGTGTTACCAAAGCCCAGAGCAGTAGGGAGGGGAAGTTGGTGGGTAGAGAGAAACCACTTGAAAACAGCTTATTGAGTTAGGAGGTGCAGCATTACGTCTATGTATCATCAAAGTAAAAAAAAAATAGTAAAAATACAATACATACAGTCTTGTGCTTTTGCAAATGTATTATGAACAGAATGCTTATTTTTCACACTCTGAATTTTGTGTAGCCAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_744:HG4_Ill_Krunchall_9331:HG2_Ill_Krunchall_9021:HG3_PB_assemblyticsfalcon_22063:HG2_PB_assemblyticsfalcon_22140:HG4_PB_pbsv_6270:HG4_PB_SVrefine2PBcRDovetail_3136:HG4_Ill_manta_1582:HG4_Ill_MetaSV_4312:HG4_Ill_GATKHCSBGrefine_4450:HG4_10X_allpass_1224:HG3_PB_SVrefine2Falcon1Dovetail_3903:HG2_PB_pbsv_6253:HG2_PB_SVrefine2Falcon1plusDovetail_9840:HG2_Ill_manta_1813:HG2_Ill_breakscan11_923:HG2_Ill_SpiralSDKrefine_14114:HG2_Ill_MetaSV_4151:HG2_Ill_GATKHCSBGrefine_4395:HG2_10X_allpass_1056:HG2_10X_SVrefine210Xhap12_4514;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4514:HG2_10X_allpass_1056:HG2_Ill_GATKHCSBGrefine_4395:HG2_Ill_MetaSV_4151:HG2_Ill_SpiralSDKrefine_14114:HG2_Ill_breakscan11_923:HG2_Ill_manta_1813:HG2_PB_SVrefine2Falcon1plusDovetail_9840:HG2_PB_pbsv_6253:HG3_PB_SVrefine2Falcon1Dovetail_3903:HG4_10X_allpass_1224:HG4_Ill_GATKHCSBGrefine_4450:HG4_Ill_MetaSV_4312:HG4_Ill_manta_1582:HG4_PB_SVrefine2PBcRDovetail_3136:HG4_PB_pbsv_6270;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0139241;ClusterMaxSizeDiff=0.0139241;ClusterMaxEditDist=0.0139241;PBcalls=7;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-791;DistBack=-792;DistForward=-725;DistMin=-792;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=5:155311784-155312580;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3282.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:57:36:0|1:52:5:0:25:./.:0:0:0:0:0/1:58:20:0/1:62:17:.:.:.
chr5	159742556	HG4_PB_SVrefine2PBcRDovetail_3145	AAGGGGATGAATAAAAACAAAAAAAGATTAGAGTACGATCCCAGTTAAACTACATTCATGCACACACACATATGCAAAAATATTAACTGTGTAATCAGAGTGGTAGG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_9050:HG2_PB_PB10Xdip_23371:HG4_PB_pbsv_6284:HG4_PB_assemblyticsfalcon_21637:HG4_PB_SVrefine2PBcRDovetail_3145:HG4_PB_SVrefine2Falcon1Dovetail_3810:HG4_Ill_svaba_8212:HG4_Ill_scalpel_6112:HG4_Ill_manta_1585:HG4_Ill_SVrefine2DISCOVARDovetail_4679:HG4_Ill_MetaSV_4319:HG4_Ill_GATKHC_10633:HG4_Ill_GATKHCSBGrefine_4462:HG4_Ill_Cortex_3033:HG4_Ill_250bpfermikitraw_8927:HG4_Ill_150bpfermikitraw_8537:HG4_CG_vcfBeta_4154:HG4_10X_allpass_1227:HG3_PB_assemblyticsfalcon_22088:HG3_PB_SVrefine2Falcon1Dovetail_3912:HG2_PB_pbsv_6267:HG2_PB_assemblyticsPBcR_21436:HG2_PB_SVrefine2PBcRplusDovetail_9184:HG2_PB_SVrefine2PB10Xhap12_4585:HG2_PB_SVrefine2Falcon2Bionano_3137:HG2_Ill_svaba_8109:HG2_Ill_scalpel_6243:HG2_Ill_manta_1817:HG2_Ill_breakscan11_924:HG2_Ill_SpiralSDKrefine_14136:HG2_Ill_SVrefine2DISCOVARplusDovetail_10744:HG2_Ill_MetaSV_4157:HG2_Ill_GATKHC_10552:HG2_Ill_GATKHCSBGrefine_4403:HG2_Ill_Cortex_7347:HG2_CG_vcfBeta_3699:HG2_10X_SVrefine210Xhap12_4530:HG4_Ill_Krunchall_9360;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4530:HG2_CG_vcfBeta_3699:HG2_Ill_Cortex_7347:HG2_Ill_GATKHCSBGrefine_4403:HG2_Ill_GATKHC_10552:HG2_Ill_MetaSV_4157:HG2_Ill_SVrefine2DISCOVARplusDovetail_10744:HG2_Ill_SpiralSDKrefine_14136:HG2_Ill_breakscan11_924:HG2_Ill_manta_1817:HG2_Ill_scalpel_6243:HG2_Ill_svaba_8109:HG2_PB_SVrefine2Falcon2Bionano_3137:HG2_PB_SVrefine2PB10Xhap12_4585:HG2_PB_SVrefine2PBcRplusDovetail_9184:HG2_PB_assemblyticsPBcR_21436:HG2_PB_pbsv_6267:HG3_PB_SVrefine2Falcon1Dovetail_3912:HG3_PB_assemblyticsfalcon_22088:HG4_10X_allpass_1227:HG4_CG_vcfBeta_4154:HG4_Ill_150bpfermikitraw_8537:HG4_Ill_250bpfermikitraw_8927:HG4_Ill_Cortex_3033:HG4_Ill_GATKHCSBGrefine_4462:HG4_Ill_GATKHC_10633:HG4_Ill_MetaSV_4319:HG4_Ill_SVrefine2DISCOVARDovetail_4679:HG4_Ill_manta_1585:HG4_Ill_scalpel_6112:HG4_Ill_svaba_8212:HG4_PB_SVrefine2Falcon1Dovetail_3810:HG4_PB_SVrefine2PBcRDovetail_3145:HG4_PB_assemblyticsfalcon_21637:HG4_PB_pbsv_6284;NumExactMatchSVs=35;ClusterMaxShiftDist=0.169014;ClusterMaxSizeDiff=0.169014;ClusterMaxEditDist=0.169014;PBcalls=12;Illcalls=22;TenXcalls=2;CGcalls=2;PBexactcalls=11;Illexactcalls=20;TenXexactcalls=2;CGexactcalls=2;HG2count=19;HG3count=2;HG4count=17;NumTechs=4;NumTechsExact=4;SVLEN=-106;DistBack=24512;DistForward=-101;DistMin=-101;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=5:159742557-159742663;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3283.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:35:0|1:28:8:1:23:./.:0:0:0:0:0/1:41:22:./.:.:.:.:.:.
chr5	160414116	HG4_10X_allpass_1228	CTGATACCTGCACTGTGGGGATAGAAGAGAATATCCTTCTCCTAAGGAAATACTCACTGAAGGGGTAAAAAGTGGTAACATATGCAACTTACTTTTCAA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_6288:HG2_PB_assemblyticsfalcon_22170:HG4_PB_assemblyticsfalcon_21642:HG4_PB_SVrefine2Falcon1Dovetail_3812:HG4_Ill_svaba_8220:HG4_Ill_scalpel_6117:HG4_Ill_manta_1586:HG4_Ill_Krunchall_9368:HG4_Ill_GATKHC_10640:HG4_Ill_GATKHCSBGrefine_4466:HG4_Ill_Cortex_3036:HG4_Ill_250bpfermikitraw_8938:HG4_Ill_150bpfermikitraw_8545:HG4_CG_vcfBeta_4160:HG4_10X_allpass_1228:HG3_PB_pbsv_6080:HG3_PB_assemblyticsfalcon_22094:HG3_PB_SVrefine2Falcon1Dovetail_3914:HG3_Ill_svaba_8220:HG3_Ill_manta_1498:HG3_Ill_SVrefine2DISCOVARDovetail_4793:HG3_Ill_Krunchall_8840:HG3_Ill_GATKHC_10529:HG3_Ill_GATKHCSBGrefine_4308:HG3_Ill_Cortex_3055:HG3_Ill_250bpfermikitraw_8557:HG3_Ill_150bpfermikitraw_8378:HG3_CG_vcfBeta_3539:HG3_10X_allpass_1288:HG2_PB_pbsv_6270:HG2_PB_SVrefine2Falcon1plusDovetail_9850:HG2_Ill_svaba_8115:HG2_Ill_scalpel_6248:HG2_Ill_manta_1818:HG2_Ill_breakscan11_925:HG2_Ill_SpiralSDKrefine_14139:HG2_Ill_Krunchall_9055:HG2_Ill_GATKHC_10560:HG2_Ill_GATKHCSBGrefine_4408:HG2_Ill_Cortex_7349:HG2_Ill_250bpfermikitraw_8868:HG2_Ill_150bpfermikitraw_8324:HG2_CG_vcfBeta_3704:HG2_10X_allpass_1058:HG2_10X_SVrefine210Xhap12_4534:HG2_PB_SVrefine2PB10Xhap12_4587;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4534:HG2_10X_allpass_1058:HG2_CG_vcfBeta_3704:HG2_Ill_150bpfermikitraw_8324:HG2_Ill_250bpfermikitraw_8868:HG2_Ill_Cortex_7349:HG2_Ill_GATKHCSBGrefine_4408:HG2_Ill_GATKHC_10560:HG2_Ill_Krunchall_9055:HG2_Ill_SpiralSDKrefine_14139:HG2_Ill_breakscan11_925:HG2_Ill_manta_1818:HG2_Ill_scalpel_6248:HG2_Ill_svaba_8115:HG2_PB_SVrefine2Falcon1plusDovetail_9850:HG2_PB_pbsv_6270:HG3_10X_allpass_1288:HG3_CG_vcfBeta_3539:HG3_Ill_150bpfermikitraw_8378:HG3_Ill_250bpfermikitraw_8557:HG3_Ill_Cortex_3055:HG3_Ill_GATKHCSBGrefine_4308:HG3_Ill_GATKHC_10529:HG3_Ill_Krunchall_8840:HG3_Ill_SVrefine2DISCOVARDovetail_4793:HG3_Ill_manta_1498:HG3_Ill_svaba_8220:HG3_PB_SVrefine2Falcon1Dovetail_3914:HG3_PB_assemblyticsfalcon_22094:HG3_PB_pbsv_6080:HG4_10X_allpass_1228:HG4_CG_vcfBeta_4160:HG4_Ill_150bpfermikitraw_8545:HG4_Ill_250bpfermikitraw_8938:HG4_Ill_Cortex_3036:HG4_Ill_GATKHCSBGrefine_4466:HG4_Ill_GATKHC_10640:HG4_Ill_Krunchall_9368:HG4_Ill_manta_1586:HG4_Ill_scalpel_6117:HG4_Ill_svaba_8220:HG4_PB_SVrefine2Falcon1Dovetail_3812:HG4_PB_assemblyticsfalcon_21642;NumExactMatchSVs=43;ClusterMaxShiftDist=0.0502513;ClusterMaxSizeDiff=0.0502513;ClusterMaxEditDist=0.140704;PBcalls=10;Illcalls=29;TenXcalls=4;CGcalls=3;PBexactcalls=7;Illexactcalls=29;TenXexactcalls=4;CGexactcalls=3;HG2count=18;HG3count=14;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-98;DistBack=8690;DistForward=2585;DistMin=2585;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:160414117-160414216;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3284.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:60:0|1:26:7:5:39:./.:0:0:0:0:0/1:30:23:./.:.:.:.:.:.
chr5	160431305	HG2_10X_SVrefine210Xhap12_4535	TAGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4535:HG3_Ill_Krunchall_8842:HG4_10X_allpass_1229:HG4_PB_assemblyticsfalcon_21645:HG4_PB_SVrefine2Falcon1Dovetail_3814:HG2_10X_allpass_1059:HG4_PB_assemblyticsfalcon_21644:HG4_PB_SVrefine2Falcon1Dovetail_3813:HG3_Ill_Spiral_6952:HG4_PB_pbsv_6289:HG3_Ill_MetaSV_4326:HG2_Ill_tnscope_746:HG2_Ill_MetaSV_4158:HG4_PB_SVrefine2PBcRDovetail_3148:HG4_Ill_scalpel_6118:HG4_Ill_manta_1587:HG4_Ill_SVrefine2DISCOVARDovetail_4682:HG4_Ill_MetaSV_4320:HG4_Ill_GATKHCSBGrefine_4467:HG3_PB_pbsv_6081:HG3_PB_SVrefine2PBcRDovetail_2903:HG3_PB_SVrefine2Falcon1Dovetail_3915:HG3_Ill_scalpel_6321:HG3_Ill_manta_1499:HG3_Ill_GATKHCSBGrefine_4309:HG3_10X_allpass_1289:HG2_PB_pbsv_6271:HG2_PB_SVrefine2PBcRplusDovetail_9186:HG2_PB_SVrefine2PB10Xhap12_4588:HG2_PB_SVrefine2Falcon2Bionano_3139:HG2_PB_SVrefine2Falcon1plusDovetail_9851:HG2_PB_HySA_11718:HG2_Ill_manta_1819:HG2_Ill_breakscan11_926:HG2_Ill_SVrefine2DISCOVARplusDovetail_10748:HG2_Ill_GATKHCSBGrefine_4409;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4535:HG4_PB_SVrefine2PBcRDovetail_3148:HG4_Ill_scalpel_6118:HG4_Ill_manta_1587:HG4_Ill_SVrefine2DISCOVARDovetail_4682:HG4_Ill_MetaSV_4320:HG4_Ill_GATKHCSBGrefine_4467:HG3_PB_pbsv_6081:HG3_PB_SVrefine2PBcRDovetail_2903:HG3_PB_SVrefine2Falcon1Dovetail_3915:HG3_Ill_scalpel_6321:HG3_Ill_manta_1499:HG3_Ill_GATKHCSBGrefine_4309:HG3_10X_allpass_1289:HG2_PB_pbsv_6271:HG2_PB_SVrefine2PBcRplusDovetail_9186:HG2_PB_SVrefine2PB10Xhap12_4588:HG2_PB_SVrefine2Falcon2Bionano_3139:HG2_PB_SVrefine2Falcon1plusDovetail_9851:HG2_PB_HySA_11718:HG2_Ill_manta_1819:HG2_Ill_breakscan11_926:HG2_Ill_SVrefine2DISCOVARplusDovetail_10748:HG2_Ill_GATKHCSBGrefine_4409;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.0555556;PBcalls=15;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=4272;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:160431306-160431649;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:2:18:1:20:./.:0:0:0:0:1/1:0:56:0/1:4:21:.:.:.
chr5	163001175	HG2_Ill_svaba_8131	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_6284:HG3_Ill_GATKHC_10559:HG2_PB_assemblyticsfalcon_22195:HG3_Ill_GATKHCSBGrefine_4317:HG2_Ill_GATKHC_10582:HG2_Ill_GATKHCSBGrefine_4419:HG3_Ill_scalpel_6344:HG3_Ill_150bpfermikitraw_8402:HG2_PB_assemblyticsPBcR_21461:HG2_Ill_svaba_8132:HG2_Ill_scalpel_6266:HG4_Ill_svaba_8237:HG4_Ill_GATKHC_10660:HG4_Ill_GATKHCSBGrefine_4473:HG2_Ill_svaba_8131:HG2_Ill_scalpel_6265:HG2_Ill_manta_1823:HG2_Ill_GATKHC_10581:HG2_Ill_GATKHCSBGrefine_4418:HG2_Ill_150bpfermikitraw_8342:HG2_PB_HySA_11750:HG3_PB_pbsv_6093;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8342:HG2_Ill_GATKHCSBGrefine_4418:HG2_Ill_GATKHC_10581:HG2_Ill_manta_1823:HG2_Ill_scalpel_6265:HG2_Ill_svaba_8131:HG4_Ill_GATKHCSBGrefine_4473:HG4_Ill_GATKHC_10660:HG4_Ill_svaba_8237;NumExactMatchSVs=9;ClusterMaxShiftDist=0.163934;ClusterMaxSizeDiff=0.163934;ClusterMaxEditDist=0.241379;PBcalls=5;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-65;DistBack=189;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=5:163001174-163001243;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.9692;PctRecOverlap=0.9545;SizeDiff=2;StartDistance=1;EndDistance=3;GTMatch=1;TruScore=96;MatchId=3286.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:28:./.:12:20:0:0:./.:0:0:0:0:1/1:0:19:./.:.:.:.:.:.
chr5	163807087	HG2_PB_SVrefine2Falcon2Bionano_3149	CACACACACATATGTGTATATATACACACATGTGTATATGTGTATATATACACACATGTGTATATGTGTATATATACACACATGTGTATATGTGTATATATACACACATATGTGTATATGTGTATATAT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3149:HG2_PB_HySA_11760:HG4_Ill_GATKHC_10669:HG2_PB_assemblyticsfalcon_22204:HG2_PB_SVrefine2Falcon1plusDovetail_9862:HG3_PB_HySA_9760:HG3_Ill_manta_1502:HG3_PB_pbsv_6097:HG3_Ill_SVrefine2DISCOVARDovetail_4806:HG2_PB_pbsv_6289:HG2_PB_SVrefine2PB10Xhap12_4603;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3149:HG3_Ill_SVrefine2DISCOVARDovetail_4806;NumExactMatchSVs=2;ClusterMaxShiftDist=0.32287;ClusterMaxSizeDiff=0.32287;ClusterMaxEditDist=0.348718;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-128;DistBack=50652;DistForward=-118;DistMin=-118;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=139;REFWIDENED=5:163807088-163807354;PctSeqSimilarity=0.9923;PctSizeSimilarity=0.9846;PctRecOverlap=0.9847;SizeDiff=-2;StartDistance=2;EndDistance=0;GTMatch=1;TruScore=98;MatchId=3287.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:16:50:1/1:5:21:8:25:./.:0:0:0:0:1/1:1:31:./.:.:.:.:.:.
chr5	164316068	HG4_Ill_150bpfermikitraw_8575	CTATATATATTCCCATATATATATTCCTATATATATATTCCCATATATATATTCCTA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_6305:HG3_PB_pbsv_6099:HG2_PB_HySA_11765:HG4_PB_assemblyticsfalcon_21672:HG2_PB_HySA_11764:HG2_PB_pbsv_6291:HG4_Ill_GATKHC_10673:HG4_Ill_GATKHCSBGrefine_4477:HG4_Ill_250bpfermikitraw_8970:HG4_Ill_150bpfermikitraw_8575:HG3_PB_assemblyticsfalcon_22130:HG3_Ill_GATKHCSBGrefine_4324:HG3_Ill_250bpfermikitraw_8596:HG2_PB_assemblyticsPBcR_21471:HG2_Ill_GATKHC_10595:HG2_Ill_GATKHCSBGrefine_4426:HG2_Ill_250bpfermikitraw_8899:HG2_PB_assemblyticsfalcon_22207;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8899:HG2_Ill_GATKHCSBGrefine_4426:HG2_Ill_GATKHC_10595:HG2_PB_assemblyticsPBcR_21471:HG3_Ill_250bpfermikitraw_8596:HG3_Ill_GATKHCSBGrefine_4324:HG3_PB_assemblyticsfalcon_22130:HG4_Ill_150bpfermikitraw_8575:HG4_Ill_250bpfermikitraw_8970:HG4_Ill_GATKHCSBGrefine_4477:HG4_Ill_GATKHC_10673;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0521739;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.0892857;PBcalls=9;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=102014;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=5:164316067-164316196;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3288.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:51:1/1:2:28:1:9:./.:0:0:0:0:1/1:0:25:./.:.:.:.:.:.
chr5	164468656	HG2_Ill_150bpfermikitraw_8350	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_6102:HG2_Ill_manta_1826:HG2_PB_HySA_11767:HG4_Ill_Krunchall_9409:HG4_Ill_250bpfermikitraw_8972:HG3_Ill_Krunchall_8881:HG3_Ill_250bpfermikitraw_8598:HG2_Ill_Krunchall_9087:HG2_Ill_250bpfermikitraw_8901:HG2_Ill_150bpfermikitraw_8350:HG2_PB_assemblyticsPBcR_21474:HG2_PB_assemblyticsfalcon_22210:HG4_Ill_GATKHC_10675:HG4_Ill_GATKHCSBGrefine_4479:HG4_CG_vcfBeta_4176:HG3_Ill_GATKHC_10577:HG3_Ill_GATKHCSBGrefine_4326:HG2_Ill_GATKHC_10598:HG2_Ill_GATKHCSBGrefine_4428:HG2_PB_pbsv_6294:HG4_PB_pbsv_6308;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8350:HG2_Ill_250bpfermikitraw_8901:HG2_Ill_Krunchall_9087:HG3_Ill_250bpfermikitraw_8598:HG3_Ill_Krunchall_8881:HG4_Ill_250bpfermikitraw_8972:HG4_Ill_Krunchall_9409;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0719424;ClusterMaxSizeDiff=0.0719424;ClusterMaxEditDist=0.1;PBcalls=6;Illcalls=14;TenXcalls=0;CGcalls=1;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-70;DistBack=-22;DistForward=43433;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=5:164468655-164468727;PctSeqSimilarity=0.9929;PctSizeSimilarity=0.9857;PctRecOverlap=0.9859;SizeDiff=1;StartDistance=0;EndDistance=1;GTMatch=0;TruScore=98;MatchId=3289.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:51:1/1:4:15:1:8:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr5	164545356	HG3_Ill_GATKHC_10579	ATATATATGGATTATATATATGGATTATATATAGATTATATATGTAGAGAT	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_22211:HG2_PB_HySA_11769:HG2_PB_pbsv_6295:HG4_Ill_svaba_8249:HG4_Ill_scalpel_6145:HG4_Ill_Krunchall_9410:HG4_Ill_GATKHC_10676:HG4_Ill_GATKHCSBGrefine_4480:HG4_Ill_250bpfermikitraw_8973:HG4_Ill_150bpfermikitraw_8578:HG3_Ill_svaba_8249:HG3_Ill_scalpel_6356:HG3_Ill_Krunchall_8882:HG3_Ill_GATKHC_10579:HG3_Ill_GATKHCSBGrefine_4327:HG3_Ill_250bpfermikitraw_8599:HG2_PB_assemblyticsPBcR_21476:HG2_Ill_svaba_8142:HG2_Ill_scalpel_6276:HG2_Ill_Krunchall_9088:HG2_Ill_GATKHC_10599:HG2_Ill_GATKHCSBGrefine_4429:HG2_Ill_250bpfermikitraw_8903:HG2_Ill_150bpfermikitraw_8351;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8351:HG2_Ill_250bpfermikitraw_8903:HG2_Ill_GATKHCSBGrefine_4429:HG2_Ill_GATKHC_10599:HG2_Ill_Krunchall_9088:HG2_Ill_scalpel_6276:HG2_Ill_svaba_8142:HG2_PB_assemblyticsPBcR_21476:HG3_Ill_250bpfermikitraw_8599:HG3_Ill_GATKHCSBGrefine_4327:HG3_Ill_GATKHC_10579:HG3_Ill_Krunchall_8882:HG3_Ill_scalpel_6356:HG3_Ill_svaba_8249:HG4_Ill_150bpfermikitraw_8578:HG4_Ill_250bpfermikitraw_8973:HG4_Ill_GATKHCSBGrefine_4480:HG4_Ill_GATKHC_10676:HG4_Ill_Krunchall_9410:HG4_Ill_scalpel_6145:HG4_Ill_svaba_8249;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0571429;PBcalls=4;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=33195;DistForward=55015;DistMin=33195;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=69;REFWIDENED=5:164545355-164545476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3290.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:13:71:1/1:4:14:3:36:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr5	166294129	HG2_Ill_manta_1828	ATTTTTTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3152:HG2_PB_HySA_11778:HG3_Ill_Krunchall_8894:HG4_PB_HySA_9411:HG4_Ill_Spiral_526:HG3_PB_HySA_9771:HG3_Ill_Spiral_6997:HG2_Ill_Spiral_466:HG2_PB_pbsv_6299:HG4_Ill_MetaSV_4325:HG3_Ill_MetaSV_4331:HG4_Ill_manta_1593:HG4_Ill_GATKHCSBGrefine_4484:HG4_Ill_150bpfermikitraw_8592:HG4_10X_allpass_1233:HG3_Ill_scalpel_6364:HG3_Ill_manta_1504:HG3_Ill_GATKHC_10594:HG3_Ill_GATKHCSBGrefine_4331:HG2_PB_SVrefine2PB10Xhap12_4608:HG2_Ill_scalpel_6281:HG2_Ill_manta_1828:HG2_Ill_MetaSV_4166:HG2_Ill_GATKHCSBGrefine_4433:HG2_10X_allpass_1063:HG4_PB_pbsv_6313:HG3_PB_pbsv_6107:HG4_PB_SVrefine2Falcon1Dovetail_3827:HG3_PB_SVrefine2PBcRDovetail_2918:HG3_PB_SVrefine2Falcon1Dovetail_3928:HG3_Ill_SVrefine2DISCOVARDovetail_4826:HG2_PB_SVrefine2PBcRplusDovetail_9199:HG2_PB_SVrefine2Falcon1plusDovetail_9866:HG2_Ill_SVrefine2DISCOVARplusDovetail_10775:HG2_10X_SVrefine210Xhap12_4557:HG4_Ill_SVrefine2DISCOVARDovetail_4715;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_1063:HG2_Ill_GATKHCSBGrefine_4433:HG2_Ill_MetaSV_4166:HG2_Ill_manta_1828:HG2_Ill_scalpel_6281:HG2_PB_SVrefine2PB10Xhap12_4608:HG3_Ill_GATKHCSBGrefine_4331:HG3_Ill_GATKHC_10594:HG3_Ill_manta_1504:HG3_Ill_scalpel_6364:HG4_10X_allpass_1233:HG4_Ill_150bpfermikitraw_8592:HG4_Ill_GATKHCSBGrefine_4484:HG4_Ill_manta_1593;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0208333;ClusterMaxSizeDiff=0.0208333;ClusterMaxEditDist=0.157068;PBcalls=13;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-192;DistBack=36900;DistForward=-180;DistMin=-180;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=178;REFWIDENED=5:166293966-166294335;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:1:30:0:28:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr5	166474422	HG4_Ill_scalpel_6154	CAAAGAAAGTTCCAAATTGATAACCTCTGGTATGTCCTAGAGATGGTTTATTTTGCTTTCTTAATTTATAATGTGAGAATTAG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10777:HG4_PB_HySA_9414:HG4_PB_assemblyticsfalcon_21683:HG4_PB_pbsv_6315:HG2_PB_pbsv_6301:HG4_Ill_svaba_8269:HG4_Ill_scalpel_6154:HG4_Ill_manta_1595:HG4_Ill_Krunchall_9424:HG4_Ill_GATKHC_10694:HG4_Ill_GATKHCSBGrefine_4486:HG4_Ill_250bpfermikitraw_8989:HG4_Ill_150bpfermikitraw_8594:HG2_Ill_svaba_8161:HG2_Ill_scalpel_6285:HG2_Ill_manta_1830:HG2_Ill_breakscan11_929:HG2_Ill_SpiralSDKrefine_14172:HG2_Ill_Krunchall_9102:HG2_Ill_GATKHC_10615:HG2_Ill_GATKHCSBGrefine_4436:HG2_Ill_250bpfermikitraw_8919:HG4_Ill_SVrefine2DISCOVARDovetail_4717:HG3_PB_SVrefine2Falcon1Dovetail_3929:HG2_PB_SVrefine2PBcRplusDovetail_9201:HG2_PB_SVrefine2PB10Xhap12_4610:HG2_PB_SVrefine2Falcon1plusDovetail_9868:HG2_PB_HySA_11781;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_8919:HG2_Ill_GATKHCSBGrefine_4436:HG2_Ill_GATKHC_10615:HG2_Ill_Krunchall_9102:HG2_Ill_SpiralSDKrefine_14172:HG2_Ill_breakscan11_929:HG2_Ill_manta_1830:HG2_Ill_scalpel_6285:HG2_Ill_svaba_8161:HG4_Ill_150bpfermikitraw_8594:HG4_Ill_250bpfermikitraw_8989:HG4_Ill_GATKHCSBGrefine_4486:HG4_Ill_GATKHC_10694:HG4_Ill_Krunchall_9424:HG4_Ill_manta_1595:HG4_Ill_scalpel_6154:HG4_Ill_svaba_8269;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0365854;PBcalls=9;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=-82;DistBack=80637;DistForward=-70;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=80;REFWIDENED=5:166474361-166474522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3293.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:25:0|1:42:1:1:24:./.:0:0:0:0:0/1:41:19:./.:.:.:.:.:.
chr5	167612927	HG2_Ill_Krunchall_9114	ATATATATATATATATATATATATATATATATATATATATATATTTGAATT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4561:HG3_PB_assemblyticsfalcon_22150:HG3_PB_SVrefine2PBcRDovetail_2924:HG3_Ill_svaba_8275:HG3_Ill_scalpel_6375:HG3_Ill_SVrefine2DISCOVARDovetail_4832:HG3_Ill_Krunchall_8907:HG3_Ill_GATKHC_10610:HG3_Ill_GATKHCSBGrefine_4337:HG3_Ill_250bpfermikitraw_8628:HG4_PB_SVrefine2Falcon1Dovetail_3831:HG4_Ill_svaba_8278:HG4_Ill_SVrefine2DISCOVARDovetail_4722:HG4_Ill_Krunchall_9440:HG4_Ill_GATKHC_10708:HG4_Ill_GATKHCSBGrefine_4488:HG4_Ill_250bpfermikitraw_9003:HG3_Ill_svaba_8274:HG3_Ill_Krunchall_8906:HG3_Ill_GATKHC_10609:HG3_Ill_GATKHCSBGrefine_4336:HG3_Ill_FB_5775:HG3_Ill_250bpfermikitraw_8627:HG3_Ill_150bpfermikitraw_8444:HG2_PB_SVrefine2Falcon1plusDovetail_9871:HG2_Ill_svaba_8170:HG2_Ill_SpiralSDKrefine_14181:HG2_Ill_Krunchall_9114:HG2_Ill_GATKHC_10627:HG2_Ill_GATKHCSBGrefine_4438:HG2_Ill_250bpfermikitraw_8932:HG2_Ill_150bpfermikitraw_8380;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4561:HG4_Ill_svaba_8278:HG4_Ill_SVrefine2DISCOVARDovetail_4722:HG4_Ill_Krunchall_9440:HG4_Ill_GATKHC_10708:HG4_Ill_GATKHCSBGrefine_4488:HG4_Ill_250bpfermikitraw_9003:HG3_Ill_svaba_8274:HG3_Ill_Krunchall_8906:HG3_Ill_GATKHC_10609:HG3_Ill_GATKHCSBGrefine_4336:HG3_Ill_FB_5775:HG3_Ill_250bpfermikitraw_8627:HG3_Ill_150bpfermikitraw_8444:HG2_PB_SVrefine2Falcon1plusDovetail_9871:HG2_Ill_svaba_8170:HG2_Ill_SpiralSDKrefine_14181:HG2_Ill_Krunchall_9114:HG2_Ill_GATKHC_10627:HG2_Ill_GATKHCSBGrefine_4438:HG2_Ill_250bpfermikitraw_8932:HG2_Ill_150bpfermikitraw_8380;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0816327;ClusterMaxEditDist=0.102041;PBcalls=4;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=16;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=-76;DistForward=-9;DistMin=-76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=53;REFWIDENED=5:167612928-167613030;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3294.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:29:0|1:26:2:4:25:./.:0:0:0:0:0/1:38:19:./.:.:.:.:.:.
chr5	168742523	HG2_Ill_SpiralSDKrefine_14190	TAAAAATGTTCCCTGACTCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_930:HG4_PB_pbsv_6321:HG4_Ill_Krunchall_9448:HG3_Ill_Krunchall_8916:HG2_Ill_Krunchall_9122:HG4_PB_assemblyticsfalcon_21701:HG2_PB_assemblyticsfalcon_22246:HG2_PB_assemblyticsPBcR_21507:HG2_PB_pbsv_6310:HG3_PB_pbsv_6118:HG2_PB_HySA_11809:HG4_Ill_MetaSV_4326:HG3_PB_SVrefine2Falcon1Dovetail_3936:HG3_Ill_MetaSV_4333:HG2_Ill_tnscope_748:HG4_PB_SVrefine2Falcon1Dovetail_3835:HG4_Ill_scalpel_6169:HG4_Ill_manta_1597:HG4_Ill_SVrefine2DISCOVARDovetail_4726:HG4_Ill_GATKHCSBGrefine_4490:HG4_10X_allpass_1234:HG3_PB_assemblyticsfalcon_22159:HG3_PB_SVrefine2PBcRDovetail_2927:HG3_PB_HySA_9792:HG3_Ill_scalpel_6381:HG3_Ill_manta_1505:HG3_Ill_SVrefine2DISCOVARDovetail_4836:HG3_Ill_GATKHCSBGrefine_4341:HG3_10X_allpass_1292:HG2_PB_SVrefine2PBcRplusDovetail_9207:HG2_PB_SVrefine2PB10Xhap12_4619:HG2_PB_SVrefine2Falcon2Bionano_3158:HG2_PB_SVrefine2Falcon1plusDovetail_9875:HG2_Ill_scalpel_6296:HG2_Ill_manta_1831:HG2_Ill_SpiralSDKrefine_14190:HG2_Ill_SVrefine2DISCOVARplusDovetail_10786:HG2_Ill_MetaSV_4167:HG2_Ill_GATKHCSBGrefine_4440:HG2_10X_SVrefine210Xhap12_4566;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4566:HG2_Ill_GATKHCSBGrefine_4440:HG2_Ill_MetaSV_4167:HG2_Ill_SVrefine2DISCOVARplusDovetail_10786:HG2_Ill_SpiralSDKrefine_14190:HG2_Ill_manta_1831:HG2_Ill_scalpel_6296:HG2_PB_SVrefine2Falcon1plusDovetail_9875:HG2_PB_SVrefine2Falcon2Bionano_3158:HG2_PB_SVrefine2PB10Xhap12_4619:HG2_PB_SVrefine2PBcRplusDovetail_9207:HG3_10X_allpass_1292:HG3_Ill_GATKHCSBGrefine_4341:HG3_Ill_SVrefine2DISCOVARDovetail_4836:HG3_Ill_manta_1505:HG3_Ill_scalpel_6381:HG3_PB_HySA_9792:HG3_PB_SVrefine2PBcRDovetail_2927:HG3_PB_assemblyticsfalcon_22159:HG4_10X_allpass_1234:HG4_Ill_GATKHCSBGrefine_4490:HG4_Ill_SVrefine2DISCOVARDovetail_4726:HG4_Ill_manta_1597:HG4_Ill_scalpel_6169:HG4_PB_SVrefine2Falcon1Dovetail_3835;NumExactMatchSVs=25;ClusterMaxShiftDist=0.136264;ClusterMaxSizeDiff=0.136264;ClusterMaxEditDist=0.136264;PBcalls=16;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-234;DistBack=25316;DistForward=92028;DistMin=25316;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=5:168742524-168742773;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3295.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:61:1/1:2:22:2:24:./.:0:0:0:0:1/1:0:51:./.:.:.:.:.:.
chr5	170129734	HG2_PB_SVrefine2Falcon1plusDovetail_9880	TGATTAGTCTCTGTGACCCCAAGGATGCCTCCTGAAATTGCTGATTCAATTTCTCCTAATAAAATAGGAACAATAATTAGCTAATAAGAAATCAACAATTAAAGCTATGAGAGAATTAAGTGAGATCATGTAAGCAAAGTACATGTCACAGTGCTCTGCAAATAGGCAGTGCTCAGAAGTGTCACCTTTTCTCTTTCTTCTCTGAGCCTCCGTCTTCTCTTCGGTAAAATGAGAATAATATTATGCATACCTCACAGGGGTTAAGCAATGTGAAAGTACTCTGTAAAGTATAAGGCTGAAATGTACTGGGCTCAGAACCTATAGGTCTGTTCCATTCTCGACACACGTGATATTAGCAGCACGGTACATTTAAGGACACGGCTTGATTCTTTAATCACAGGGCATCCTGTCTTCTCCACATTGCTTGGGACCCCAAAAAATGAAGTTCTGTCATGTCTCTAGACCACCACCAAACACATAAAAGTCACTTAGGAAAACATGGTAGGAGGCAGAGGAAAGGAATTGTTGAACAGGGATTGCAGATTCAGGTATATAAACGAGTGATGATGACTCTAACAACAGCTCTTGGTCTTAGTGTTGGAAATGTAATAGGGAGTAGTGGGGACTGCGGTTTAATTGTTGCCGTGTGGGAATGTGGGCCTGGCATGGCCATAATTTCAGATTTCTAAAGGAAAGCCAAAAGTTCATATTTTTATGTGAAATAAATGTTGATAAAGTTCACACTTAAATGAAGTGAAACAGACCAGGGCTGGTGGTTTATACCTGTAATTCCAGTGCTTTAAGAGGCCGAGGCAGGAGGATCACTTGAGGCCAGGAGTTCAAGGCTAGTCTGGGCAACACAGTGAGACCCCATCTCTACCAAAAAAAAATTAATTTAAAAAATAAAAGAAGTGAAACAACAGTACCCTGTGGGCTGCCAGATTGTGATTTCTGAACTAAACTGTCAGATTACAAAGTTACCCGCTAAATTAGCCAAATACTTTCCAGATATTCCCTGGGCCACTGTCTCGGGACTCTTAATATATTTTCCAATTAGTTCCTTTTAGTGCTACATACACACTTTTAGCAAATAATGAGCACTTACTAGTCACTTTCTATGTGCAAAGCAGATATTAGACATCACAGAGGGAGTGAGATACCGAAAACAAAAATAAAACAAAAATAAGCACAAGACACAATCTCCGCCTACCCCACCCTTGAATATGAAAACTGTGACACCCAAAGGTAGATTTTGATACCTGCTGGGTGATTGCTAGAGATAATAAGTGCTTTGGGAATTTGGACAGAGAGAGCTTTTTTTTGCAGTGGTCTGAGAGAGCTGCCCAGAGGAGATGGCACTTACGCCATGTTTTAAGGGTGGATAGGATTAGTGCCAGATGATCACATGCTCTGGTAGACAGGGGTCTGTGCACCAGTAGATTCTGGGGCTATTGCAGAGGACTCATGACAGG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9880:HG3_PB_pbsv_6122:HG2_PB_pbsv_6316:HG3_Ill_MetaSV_4337:HG2_Ill_MetaSV_4170:HG3_PB_SVrefine2PBcRDovetail_2929:HG3_PB_SVrefine2Falcon1Dovetail_3938:HG3_Ill_SVrefine2DISCOVARDovetail_4847:HG3_10X_allpass_1294:HG2_PB_SVrefine2PBcRplusDovetail_9210:HG2_PB_SVrefine2PB10Xhap12_4621:HG2_PB_SVrefine2Falcon2Bionano_3161;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9880:HG3_PB_SVrefine2PBcRDovetail_2929:HG3_PB_SVrefine2Falcon1Dovetail_3938:HG3_Ill_SVrefine2DISCOVARDovetail_4847:HG3_10X_allpass_1294:HG2_PB_SVrefine2PBcRplusDovetail_9210:HG2_PB_SVrefine2PB10Xhap12_4621:HG2_PB_SVrefine2Falcon2Bionano_3161;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00203874;ClusterMaxSizeDiff=0.00203874;ClusterMaxEditDist=0.00204012;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1471;DistBack=-299;DistForward=-1470;DistMin=-1470;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=316;REFWIDENED=5:170129735-170131521;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:56:0|1:40:0:0:39:./.:0:0:0:0:0/1:29:6:0/1:99:40:1453:.:.
chr5	170158817	HG3_Ill_GATKHCSBGrefine_4344	TGAAAAGCTGAGATCCCGCCACTGCACTCCAGCCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_7022:HG4_PB_HySA_9457:HG2_PB_HySA_11823:HG3_Ill_Krunchall_8924:HG2_Ill_Krunchall_9132:HG4_PB_assemblyticsfalcon_21710:HG3_PB_assemblyticsfalcon_22166:HG2_PB_assemblyticsfalcon_22258:HG4_PB_pbsv_6329:HG4_PB_SVrefine2Falcon1Dovetail_3839:HG4_Ill_svaba_8294:HG4_Ill_scalpel_6178:HG4_Ill_manta_1600:HG4_Ill_SVrefine2DISCOVARDovetail_4732:HG4_Ill_Krunchall_9459:HG4_Ill_GATKHC_10728:HG4_Ill_GATKHCSBGrefine_4493:HG4_CG_vcfBeta_4199:HG4_10X_allpass_1237:HG3_PB_pbsv_6123:HG3_PB_SVrefine2PBcRDovetail_2930:HG3_PB_SVrefine2Falcon1Dovetail_3939:HG3_Ill_svaba_8287:HG3_Ill_scalpel_6387:HG3_Ill_manta_1508:HG3_Ill_SVrefine2DISCOVARDovetail_4848:HG3_Ill_Krunchall_8923:HG3_Ill_GATKHC_10634:HG3_Ill_GATKHCSBGrefine_4344:HG3_Ill_250bpfermikitraw_8642:HG3_Ill_150bpfermikitraw_8457:HG3_10X_allpass_1295:HG2_PB_pbsv_6317:HG2_PB_assemblyticsPBcR_21518:HG2_PB_SVrefine2PBcRplusDovetail_9211:HG2_PB_SVrefine2PB10Xhap12_4623:HG2_PB_SVrefine2Falcon2Bionano_3162:HG2_PB_SVrefine2Falcon1plusDovetail_9881:HG2_Ill_svaba_8186:HG2_Ill_scalpel_6303:HG2_Ill_manta_1832:HG2_Ill_SVrefine2DISCOVARplusDovetail_10793:HG2_Ill_Krunchall_9131:HG2_Ill_GATKHC_10648:HG2_Ill_GATKHCSBGrefine_4442:HG2_10X_allpass_1064:HG2_10X_SVrefine210Xhap12_4571:HG2_Ill_breakscan11_931;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4571:HG2_10X_allpass_1064:HG2_Ill_GATKHCSBGrefine_4442:HG2_Ill_GATKHC_10648:HG2_Ill_Krunchall_9131:HG2_Ill_SVrefine2DISCOVARplusDovetail_10793:HG2_Ill_manta_1832:HG2_Ill_scalpel_6303:HG2_Ill_svaba_8186:HG2_PB_SVrefine2Falcon1plusDovetail_9881:HG2_PB_SVrefine2Falcon2Bionano_3162:HG2_PB_SVrefine2PB10Xhap12_4623:HG2_PB_SVrefine2PBcRplusDovetail_9211:HG2_PB_assemblyticsPBcR_21518:HG2_PB_pbsv_6317:HG3_10X_allpass_1295:HG3_Ill_150bpfermikitraw_8457:HG3_Ill_250bpfermikitraw_8642:HG3_Ill_GATKHCSBGrefine_4344:HG3_Ill_GATKHC_10634:HG3_Ill_Krunchall_8923:HG3_Ill_SVrefine2DISCOVARDovetail_4848:HG3_Ill_manta_1508:HG3_Ill_scalpel_6387:HG3_Ill_svaba_8287:HG3_PB_SVrefine2Falcon1Dovetail_3939:HG3_PB_SVrefine2PBcRDovetail_2930:HG3_PB_pbsv_6123:HG4_10X_allpass_1237:HG4_CG_vcfBeta_4199:HG4_Ill_GATKHCSBGrefine_4493:HG4_Ill_GATKHC_10728:HG4_Ill_Krunchall_9459:HG4_Ill_SVrefine2DISCOVARDovetail_4732:HG4_Ill_manta_1600:HG4_Ill_scalpel_6178:HG4_Ill_svaba_8294:HG4_PB_SVrefine2Falcon1Dovetail_3839;NumExactMatchSVs=38;ClusterMaxShiftDist=0.22093;ClusterMaxSizeDiff=0.22093;ClusterMaxEditDist=0.22093;PBcalls=16;Illcalls=27;TenXcalls=4;CGcalls=1;PBexactcalls=10;Illexactcalls=23;TenXexactcalls=4;CGexactcalls=1;HG2count=19;HG3count=16;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-89;DistBack=27346;DistForward=22204;DistMin=22204;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=5:170158818-170158916;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3297.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:65:1/1:0:26:1:22:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr5	172687744	HG3_PB_SVrefine2PBcRDovetail_2935	AGCCACCGCACCCAGCCTGGGCTAATCTTGTGACTTGCTTTGGTCAATAGAATGTGATGGAAACAGGCCAGGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCAGGTGGATTGCTTGAGCCCAGCACTCAAGGCCTCTTGGAGTTCAAGACCAGCCTGGAGTTCAAGACCAGTCTGGGCAACTTGGTAAAACCCCATCTCTACAAAAAACACAAAAAGTTAGCTGGGTGTGGTGGTACACACTGTAGTCCCAGCTACTTGAGAGGCTGAGGTGGGAGGATCGCTTGAGCCTCGGAGGTTGAGGCTGCAGTGAGCCGTGATTAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4582:HG4_Ill_MetaSV_4334:HG2_Ill_MetaSV_4174:HG3_PB_pbsv_6132:HG2_PB_pbsv_6327:HG4_Ill_Krunchall_9488:HG4_PB_pbsv_6341:HG4_PB_HySA_9483:HG4_Ill_MetaSV_4333:HG4_Ill_manta_1604:HG4_Ill_150bpfermikitraw_8650:HG2_10X_allpass_1066:HG2_Ill_SpiralSDKrefine_14214:HG2_PB_HySA_11841:HG4_PB_SVrefine2Falcon1Dovetail_3847:HG4_Ill_SVrefine2DISCOVARDovetail_4739:HG3_PB_SVrefine2PBcRDovetail_2935:HG3_PB_SVrefine2Falcon1Dovetail_3945:HG2_PB_SVrefine2PBcRplusDovetail_9217:HG2_PB_SVrefine2PB10Xhap12_4628:HG2_PB_SVrefine2Falcon2Bionano_3169:HG2_PB_SVrefine2Falcon1plusDovetail_9887:HG2_Ill_SVrefine2DISCOVARplusDovetail_10806:HG4_10X_allpass_1239;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4582:HG4_PB_SVrefine2Falcon1Dovetail_3847:HG4_Ill_SVrefine2DISCOVARDovetail_4739:HG3_PB_SVrefine2PBcRDovetail_2935:HG3_PB_SVrefine2Falcon1Dovetail_3945:HG2_PB_SVrefine2PBcRplusDovetail_9217:HG2_PB_SVrefine2PB10Xhap12_4628:HG2_PB_SVrefine2Falcon2Bionano_3169:HG2_PB_SVrefine2Falcon1plusDovetail_9887:HG2_Ill_SVrefine2DISCOVARplusDovetail_10806;NumExactMatchSVs=10;ClusterMaxShiftDist=0.302387;ClusterMaxSizeDiff=0.302387;ClusterMaxEditDist=0.33414;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=25390;DistForward=-27;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=360;REFWIDENED=5:172687745-172688441;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.997;PctRecOverlap=0.9676;SizeDiff=-1;StartDistance=-10;EndDistance=-11;GTMatch=1;TruScore=98;MatchId=3298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:77:1/1:3:44:3:30:./.:0:0:0:0:0/0:27:0:0/1:17:2:.:.:.
chr5	172889713	HG2_PB_SVrefine2PB10Xhap12_4629	CAAGATCCACTGAAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4584:HG4_Ill_Krunchall_9490:HG3_Ill_Krunchall_8949:HG2_Ill_Krunchall_9162:HG2_PB_HySA_11842:HG4_PB_pbsv_6342:HG4_PB_assemblyticsfalcon_21737:HG2_PB_assemblyticsfalcon_22275:HG2_PB_assemblyticsPBcR_21535:HG3_PB_assemblyticsfalcon_22186:HG3_PB_pbsv_6133:HG4_PB_HySA_9485:HG4_Ill_MetaSV_4335:HG3_Ill_MetaSV_4338:HG2_Ill_tnscope_751:HG2_Ill_MetaSV_4175:HG4_PB_SVrefine2Falcon1Dovetail_3848:HG4_Ill_scalpel_6198:HG4_Ill_manta_1605:HG4_Ill_SVrefine2DISCOVARDovetail_4741:HG4_Ill_GATKHCSBGrefine_4503:HG4_10X_allpass_1240:HG3_PB_SVrefine2PBcRDovetail_2936:HG3_PB_SVrefine2Falcon1Dovetail_3946:HG3_Ill_scalpel_6408:HG3_Ill_manta_1513:HG3_Ill_SVrefine2DISCOVARDovetail_4859:HG3_Ill_GATKHCSBGrefine_4352:HG3_10X_allpass_1297:HG2_PB_pbsv_6328:HG2_PB_SVrefine2PBcRplusDovetail_9218:HG2_PB_SVrefine2PB10Xhap12_4629:HG2_PB_SVrefine2Falcon2Bionano_3170:HG2_PB_SVrefine2Falcon1plusDovetail_9888:HG2_Ill_scalpel_6321:HG2_Ill_manta_1836:HG2_Ill_breakscan11_933:HG2_Ill_SVrefine2DISCOVARplusDovetail_10807:HG2_Ill_GATKHCSBGrefine_4452:HG2_10X_allpass_1067;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4584:HG4_PB_SVrefine2Falcon1Dovetail_3848:HG4_Ill_scalpel_6198:HG4_Ill_manta_1605:HG4_Ill_SVrefine2DISCOVARDovetail_4741:HG4_Ill_GATKHCSBGrefine_4503:HG4_10X_allpass_1240:HG3_PB_SVrefine2PBcRDovetail_2936:HG3_PB_SVrefine2Falcon1Dovetail_3946:HG3_Ill_scalpel_6408:HG3_Ill_manta_1513:HG3_Ill_SVrefine2DISCOVARDovetail_4859:HG3_Ill_GATKHCSBGrefine_4352:HG3_10X_allpass_1297:HG2_PB_pbsv_6328:HG2_PB_SVrefine2PBcRplusDovetail_9218:HG2_PB_SVrefine2PB10Xhap12_4629:HG2_PB_SVrefine2Falcon2Bionano_3170:HG2_PB_SVrefine2Falcon1plusDovetail_9888:HG2_Ill_scalpel_6321:HG2_Ill_manta_1836:HG2_Ill_breakscan11_933:HG2_Ill_SVrefine2DISCOVARplusDovetail_10807:HG2_Ill_GATKHCSBGrefine_4452:HG2_10X_allpass_1067;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0885496;ClusterMaxSizeDiff=0.0885496;ClusterMaxEditDist=0.0885496;PBcalls=16;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=93477;DistForward=-319;DistMin=-319;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=5:172889714-172890061;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:33:0:21:./.:0:0:0:0:1/1:0:45:./.:2:15:.:.:.
chr5	176387579	HG2_PB_HySA_11901	TAAAAAAAAAAAAAAATTCAGCCCTCTCTCCCTCTCCCCCTCCCCCTCCCCCTCCGTCTCCGTCTCCGTCTCCGTCTCCGTCTCCGTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAACCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCTCGGCTGCCCAGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCACCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCCCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCAGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGAGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCTGCCCCGTCCGCGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGCGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCGCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGACCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGCCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_6360:HG3_PB_HySA_9866:HG2_PB_assemblyticsfalcon_22313:HG3_PB_assemblyticsfalcon_22225:HG2_Ill_MetaSV_4178:HG2_Ill_tnscope_752:HG4_PB_assemblyticsfalcon_21772:HG4_PB_SVrefine2Falcon1Dovetail_3871:HG4_Ill_SVrefine2DISCOVARDovetail_4756:HG4_Ill_MetaSV_4341:HG4_Ill_GATKHCSBGrefine_4520:HG3_PB_pbsv_6165:HG3_PB_SVrefine2PBcRDovetail_2946:HG3_PB_SVrefine2Falcon1Dovetail_3967:HG3_Ill_SVrefine2DISCOVARDovetail_4876:HG3_Ill_MetaSV_4342:HG3_Ill_GATKHCSBGrefine_4373:HG2_PB_assemblyticsPBcR_21577:HG2_PB_SVrefine2PBcRplusDovetail_9233:HG2_PB_SVrefine2PB10Xhap12_4649:HG2_PB_SVrefine2Falcon2Bionano_3184:HG2_PB_SVrefine2Falcon1plusDovetail_9905:HG2_PB_HySA_11901:HG2_Ill_SVrefine2DISCOVARplusDovetail_10824:HG2_Ill_GATKHCSBGrefine_4471:HG2_10X_SVrefine210Xhap12_4602:HG4_PB_pbsv_6371:HG4_Ill_Krunchall_9517:HG2_Ill_breakscan11_936:HG2_10X_allpass_1069:HG3_10X_allpass_1300:HG4_10X_allpass_1245;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4602:HG2_Ill_GATKHCSBGrefine_4471:HG2_Ill_SVrefine2DISCOVARplusDovetail_10824:HG2_PB_HySA_11901:HG2_PB_SVrefine2Falcon1plusDovetail_9905:HG2_PB_SVrefine2Falcon2Bionano_3184:HG2_PB_SVrefine2PB10Xhap12_4649:HG2_PB_SVrefine2PBcRplusDovetail_9233:HG2_PB_assemblyticsPBcR_21577:HG3_Ill_GATKHCSBGrefine_4373:HG3_Ill_MetaSV_4342:HG3_Ill_SVrefine2DISCOVARDovetail_4876:HG3_PB_SVrefine2Falcon1Dovetail_3967:HG3_PB_SVrefine2PBcRDovetail_2946:HG3_PB_pbsv_6165:HG4_Ill_GATKHCSBGrefine_4520:HG4_Ill_MetaSV_4341:HG4_Ill_SVrefine2DISCOVARDovetail_4756:HG4_PB_SVrefine2Falcon1Dovetail_3871:HG4_PB_assemblyticsfalcon_21772;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00654727;ClusterMaxSizeDiff=0.00654727;ClusterMaxEditDist=0.00654727;PBcalls=16;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2601;DistBack=1791;DistForward=-2594;DistMin=-2594;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=5:176387580-176390188;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3303.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:94:./.:0:0:0:0:./.:0:0:0:0:1/1:0:32:1/1:2:214:2694:.:.
chr5	176823392	HG4_PB_SVrefine2PBcRDovetail_3159	ACCCCCATGGAGGTCGTCTCTCCCAGTGCCCCCGCGGAGATCCGCTCTCCCAGTGCCCCCGCGGAGGTCCGCTCTCCCAGTGCCCCCGCGGAGGTCCTCTCTCCCAGTGCCCCCGCGGAGGTCCTCTCTCCCAGTGCCCCCGCGGAGGTCCGCTCTCCCAGTGCCCCCGCGGAGGTCCTCTCTCCCAGTG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10829:HG4_PB_pbsv_6374:HG4_PB_HySA_9526:HG2_PB_pbsv_6363:HG4_Ill_MetaSV_4343:HG4_Ill_GATKHCSBGrefine_4524:HG4_Ill_250bpfermikitraw_9087:HG4_Ill_150bpfermikitraw_8681:HG2_Ill_GATKHCSBGrefine_4474:HG4_PB_SVrefine2PBcRDovetail_3159:HG4_PB_SVrefine2Falcon1Dovetail_3872:HG4_Ill_SVrefine2DISCOVARDovetail_4759:HG2_PB_SVrefine2PBcRplusDovetail_9235:HG2_PB_SVrefine2Falcon1plusDovetail_9906;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10829:HG4_PB_SVrefine2PBcRDovetail_3159:HG4_PB_SVrefine2Falcon1Dovetail_3872:HG4_Ill_SVrefine2DISCOVARDovetail_4759:HG2_PB_SVrefine2PBcRplusDovetail_9235:HG2_PB_SVrefine2Falcon1plusDovetail_9906;NumExactMatchSVs=6;ClusterMaxShiftDist=0.015748;ClusterMaxSizeDiff=0.015748;ClusterMaxEditDist=0.026178;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-189;DistBack=-82;DistForward=-109;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=115;REFWIDENED=5:176823420-176823696;PctSeqSimilarity=0.9773;PctSizeSimilarity=1;PctRecOverlap=0.9211;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=96;MatchId=3304.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:20:0|1:31:2:0:18:./.:0:0:0:0:0/1:30:21:./.:.:.:.:.:.
chr5	176847562	HG3_Ill_250bpfermikitraw_8699	TACCAGGAAGAAGCAGAGATCCACGGACCAGGAAGAAGCAGAGATCCACGG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8455:HG2_PB_pbsv_6364:HG4_PB_pbsv_6375:HG4_PB_SVrefine2PBcRDovetail_3160:HG4_Ill_svaba_8358:HG4_Ill_SVrefine2DISCOVARDovetail_4760:HG4_Ill_Krunchall_9521:HG4_Ill_GATKHCSBGrefine_4525:HG4_Ill_250bpfermikitraw_9088:HG4_Ill_150bpfermikitraw_8682:HG3_Ill_svaba_8349:HG3_Ill_SVrefine2DISCOVARDovetail_4878:HG3_Ill_GATKHCSBGrefine_4376:HG3_Ill_250bpfermikitraw_8699:HG2_PB_SVrefine2PBcRplusDovetail_9236:HG2_PB_SVrefine2PB10Xhap12_4652:HG2_PB_SVrefine2Falcon1plusDovetail_9907:HG2_Ill_svaba_8253:HG2_Ill_SpiralSDKrefine_14242:HG2_Ill_SVrefine2DISCOVARplusDovetail_10830:HG2_Ill_GATKHCSBGrefine_4475:HG2_Ill_250bpfermikitraw_9014;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8455:HG4_PB_SVrefine2PBcRDovetail_3160:HG4_Ill_svaba_8358:HG4_Ill_SVrefine2DISCOVARDovetail_4760:HG4_Ill_Krunchall_9521:HG4_Ill_GATKHCSBGrefine_4525:HG4_Ill_250bpfermikitraw_9088:HG4_Ill_150bpfermikitraw_8682:HG3_Ill_svaba_8349:HG3_Ill_SVrefine2DISCOVARDovetail_4878:HG3_Ill_GATKHCSBGrefine_4376:HG3_Ill_250bpfermikitraw_8699:HG2_PB_SVrefine2PBcRplusDovetail_9236:HG2_PB_SVrefine2PB10Xhap12_4652:HG2_PB_SVrefine2Falcon1plusDovetail_9907:HG2_Ill_svaba_8253:HG2_Ill_SpiralSDKrefine_14242:HG2_Ill_SVrefine2DISCOVARplusDovetail_10830:HG2_Ill_GATKHCSBGrefine_4475:HG2_Ill_250bpfermikitraw_9014;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0384615;PBcalls=6;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=0;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=96;REFWIDENED=5:176847563-176847708;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:36:1/1:1:16:2:11:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr5	176894971	HG2_Ill_GATKHCSBGrefine_4476	TCCCTTCCCCAGCCCCGGCCGCATACCCAGTTGATGAGCAGCTCTGGGCCCTCAGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4610:HG3_PB_pbsv_6169:HG3_PB_HySA_9873:HG4_PB_assemblyticsfalcon_21776:HG4_PB_HySA_9527:HG2_PB_pbsv_6366:HG4_PB_pbsv_6376:HG2_PB_HySA_11909:HG4_Ill_svaba_8359:HG4_Ill_GATKHCSBGrefine_4526:HG4_Ill_250bpfermikitraw_9089:HG4_Ill_150bpfermikitraw_8683:HG3_Ill_svaba_8350:HG3_Ill_GATKHCSBGrefine_4377:HG3_Ill_250bpfermikitraw_8700:HG2_Ill_svaba_8254:HG2_Ill_manta_1841:HG2_Ill_SpiralSDKrefine_14243:HG2_Ill_GATKHCSBGrefine_4476:HG2_Ill_250bpfermikitraw_9015:HG2_Ill_150bpfermikitraw_8456:HG4_PB_SVrefine2PBcRDovetail_3161:HG4_Ill_SVrefine2DISCOVARDovetail_4762:HG3_PB_SVrefine2PBcRDovetail_2949:HG3_PB_SVrefine2Falcon1Dovetail_3973:HG2_PB_SVrefine2PBcRplusDovetail_9237:HG2_PB_SVrefine2PB10Xhap12_4653:HG2_PB_SVrefine2Falcon2Bionano_3187:HG2_PB_SVrefine2Falcon1plusDovetail_9909:HG2_Ill_SVrefine2DISCOVARplusDovetail_10831;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8456:HG2_Ill_250bpfermikitraw_9015:HG2_Ill_GATKHCSBGrefine_4476:HG2_Ill_SpiralSDKrefine_14243:HG2_Ill_manta_1841:HG2_Ill_svaba_8254:HG3_Ill_250bpfermikitraw_8700:HG3_Ill_GATKHCSBGrefine_4377:HG3_Ill_svaba_8350:HG4_Ill_150bpfermikitraw_8683:HG4_Ill_250bpfermikitraw_9089:HG4_Ill_GATKHCSBGrefine_4526:HG4_Ill_svaba_8359;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.0892857;PBcalls=14;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-56;DistBack=18;DistForward=-18;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=112;REFWIDENED=5:176894955-176895122;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3307.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:51:1/1:5:18:3:24:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr5	176944608	HG4_PB_SVrefine2Falcon1Dovetail_3874	GTGGCAATCTCAGGCCGGGAGAGGAGAGGCGTCCTGGGCCAGGGCGCTGCAGGAATACAGGTCTGGCGATGTGCAAGTACACAGATTCACCAGGCAACAGCATTGCGGCAAGGGTGGGATGGGGAAGCCAGACCTAAGGCCAGAAAAGGAGATTGCGACCAGAGCATGCCTGCTGTGACTGTCAGAGTAAGTGGTTTCAACTTTATTAGAGACTTCTAAGGAATGACTTGGTCAGCTCTGTGCTTTCTTGCCTTCAAGAGTGTGTGCTGGGCGCTGGCACTGCGCTCAAGCAGATGATAATCAAGACACATACCTGGTGTGCGAGGAGCTTATGTAGATTGAGACTAGAAATATAGACAGATAACTGGTCTTAAAGAGAAAGATCCTAAGACAAGGTACCGCTTTTCGAAGTGTCATAGTTTTCACAGTACAATGGCCTCTTAGCTGGGATGTGAAGGATACACAGGAATTCATGAAGTCTTCTTTAGTAAAGAAAGCTTAGGCTGGGCACAGTGGCTCATTCCTGTAATCCCAGCTCTCTGGGAGGCCAAGGCAGGAGGATCGCTTGAAGCCAGGAGTTCAAGACCAGCTTGGACAACATAGCAAGACCCCATCTCTATAAAAAAAATAAGCTGGTGCTTACTGCCAGTCCCATGGTGGGTCTCAACCTGGGAGGGATGGAGGAGGACATGGTTTCTGGTCCTGCTCACAACACCCAAATACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4611:HG2_PB_pbsv_6367:HG4_PB_pbsv_6377:HG3_PB_pbsv_6170:HG4_PB_HySA_9528:HG4_10X_allpass_1248:HG4_PB_SVrefine2PBcRDovetail_3162:HG4_PB_SVrefine2Falcon1Dovetail_3874:HG4_Ill_SVrefine2DISCOVARDovetail_4763:HG3_PB_SVrefine2Falcon1Dovetail_3974:HG3_Ill_SVrefine2DISCOVARDovetail_4880:HG2_PB_SVrefine2PBcRplusDovetail_9238:HG2_PB_SVrefine2PB10Xhap12_4654:HG2_PB_SVrefine2Falcon2Bionano_3188:HG2_PB_SVrefine2Falcon1plusDovetail_9910:HG2_Ill_SVrefine2DISCOVARplusDovetail_10832;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4611:HG4_PB_SVrefine2PBcRDovetail_3162:HG4_PB_SVrefine2Falcon1Dovetail_3874:HG4_Ill_SVrefine2DISCOVARDovetail_4763:HG3_PB_SVrefine2Falcon1Dovetail_3974:HG3_Ill_SVrefine2DISCOVARDovetail_4880:HG2_PB_SVrefine2PBcRplusDovetail_9238:HG2_PB_SVrefine2PB10Xhap12_4654:HG2_PB_SVrefine2Falcon2Bionano_3188:HG2_PB_SVrefine2Falcon1plusDovetail_9910:HG2_Ill_SVrefine2DISCOVARplusDovetail_10832;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0055517;ClusterMaxSizeDiff=0.00554017;ClusterMaxEditDist=0.00971548;PBcalls=11;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-723;DistBack=-1292;DistForward=-43;DistMin=-1292;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=724;REFWIDENED=5:176944609-176946055;PctSeqSimilarity=0.9945;PctSizeSimilarity=1;PctRecOverlap=0.8757;SizeDiff=0;StartDistance=-90;EndDistance=-90;GTMatch=0;TruScore=95;MatchId=3308.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:85:1/1:1:35:0:28:./.:0:0:0:0:0/0:12:0:0/1:4:12:.:.:.
chr5	178856573	HG2_PB_SVrefine2PBcRplusDovetail_9254	GAGGCTGTCCACACTGGGAGCGCCATCCAACACTTCATATACACAGGCTGTCCACACTGGAAGTACTGTCCCCTGCCTCATCTATACAGGCTGTCCACCATGGGAGCGTCATCCAACACCCCATCTACACGGGCTGTCCACACTGGGAGCACCATCCAACACCCCATCTACAC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10844:HG3_PB_assemblyticsfalcon_22278:HG3_PB_SVrefine2Falcon1Dovetail_3995:HG2_10X_SVrefine210Xhap12_4633:HG3_PB_pbsv_6208:HG2_PB_pbsv_6399:HG3_PB_SVrefine2PBcRDovetail_2968:HG4_PB_pbsv_6412:HG2_PB_PB10Xdip_23533:HG4_PB_SVrefine2PBcRDovetail_3183:HG4_Ill_SVrefine2DISCOVARDovetail_4780:HG3_Ill_SVrefine2DISCOVARDovetail_4892:HG2_PB_SVrefine2PBcRplusDovetail_9254:HG2_PB_SVrefine2PB10Xhap12_4678:HG2_PB_SVrefine2Falcon2Bionano_3205:HG2_PB_SVrefine2Falcon1plusDovetail_9933;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10844:HG4_PB_SVrefine2PBcRDovetail_3183:HG4_Ill_SVrefine2DISCOVARDovetail_4780:HG3_Ill_SVrefine2DISCOVARDovetail_4892:HG2_PB_SVrefine2PBcRplusDovetail_9254:HG2_PB_SVrefine2PB10Xhap12_4678:HG2_PB_SVrefine2Falcon2Bionano_3205:HG2_PB_SVrefine2Falcon1plusDovetail_9933;NumExactMatchSVs=8;ClusterMaxShiftDist=0.187013;ClusterMaxSizeDiff=0.187013;ClusterMaxEditDist=0.197403;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-172;DistBack=9268;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=231;REFWIDENED=5:178856574-178856976;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3309.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:1:22:1:22:./.:0:0:0:0:./.:0:6:./.:.:.:.:.:.
chr5	179120333	HG2_Ill_svaba_8286	GAGTTTGAGACCAGCCTGGGCAAGAAAGTGAGACTCTATCTCTACAAAAAATAAAAATTAGGCTGGGCACGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAAGTGGATCACCTGAGCTTAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4635:HG2_Ill_Krunchall_9219:HG2_PB_assemblyticsfalcon_22382:HG2_PB_HySA_11971:HG2_PB_pbsv_6404:HG3_PB_pbsv_6213:HG2_Ill_MetaSV_4185:HG3_Ill_svaba_8382:HG3_Ill_manta_1522:HG3_Ill_MetaSV_4351:HG3_Ill_GATKHCSBGrefine_4400:HG3_10X_allpass_1307:HG2_Ill_svaba_8286:HG2_Ill_manta_1849:HG2_Ill_SpiralSDKrefine_14265:HG2_Ill_GATKHCSBGrefine_4490:HG2_10X_allpass_1072;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_1072:HG2_Ill_GATKHCSBGrefine_4490:HG2_Ill_SpiralSDKrefine_14265:HG2_Ill_manta_1849:HG2_Ill_svaba_8286:HG3_10X_allpass_1307:HG3_Ill_GATKHCSBGrefine_4400:HG3_Ill_MetaSV_4351:HG3_Ill_manta_1522:HG3_Ill_svaba_8382;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0222222;ClusterMaxSizeDiff=0.0148148;ClusterMaxEditDist=0.287823;PBcalls=4;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-134;DistBack=38156;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=178;REFWIDENED=5:179120270-179120581;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3310.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:10:17:./.:4:9:3:5:./.:0:0:0:0:0/1:41:15:./.:.:.:.:.:.
chr5	179276866	HG3_Ill_150bpfermikitraw_8536	ACGGGTCCCGCTATGGCACAGGCAGATGGTACGAGACGGAATTTGAGGGCT	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8482:HG4_PB_assemblyticsfalcon_21832:HG4_PB_HySA_9583:HG2_PB_assemblyticsPBcR_21633:HG4_PB_pbsv_6419:HG4_Ill_svaba_8403:HG4_Ill_Krunchall_9556:HG4_Ill_GATKHC_10856:HG4_Ill_GATKHCSBGrefine_4545:HG4_Ill_250bpfermikitraw_9128:HG4_Ill_150bpfermikitraw_8716:HG3_Ill_svaba_8385:HG3_Ill_Krunchall_9003:HG3_Ill_GATKHC_10768:HG3_Ill_GATKHCSBGrefine_4402:HG3_Ill_250bpfermikitraw_8735:HG3_Ill_150bpfermikitraw_8536:HG2_PB_pbsv_6406:HG2_Ill_svaba_8289:HG2_Ill_Krunchall_9224:HG2_Ill_GATKHC_10770:HG2_Ill_GATKHCSBGrefine_4492:HG2_Ill_250bpfermikitraw_9050;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8482:HG4_Ill_svaba_8403:HG4_Ill_Krunchall_9556:HG4_Ill_GATKHC_10856:HG4_Ill_GATKHCSBGrefine_4545:HG4_Ill_250bpfermikitraw_9128:HG4_Ill_150bpfermikitraw_8716:HG3_Ill_svaba_8385:HG3_Ill_Krunchall_9003:HG3_Ill_GATKHC_10768:HG3_Ill_GATKHCSBGrefine_4402:HG3_Ill_250bpfermikitraw_8735:HG3_Ill_150bpfermikitraw_8536:HG2_PB_pbsv_6406:HG2_Ill_svaba_8289:HG2_Ill_Krunchall_9224:HG2_Ill_GATKHC_10770:HG2_Ill_GATKHCSBGrefine_4492:HG2_Ill_250bpfermikitraw_9050;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0769231;PBcalls=5;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=20160;DistForward=202;DistMin=202;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=5:179276865-179276930;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3311.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:29:2:4:21:./.:0:0:0:0:0/1:13:14:./.:.:.:.:.:.
chr5	179298726	HG4_PB_SVrefine2PBcRDovetail_3188	GCTCACACTCCGGGCTCCTTTCCAGGATGGGCGTGGGGGAGTCTCTCTCTCACACTCCGGGCCCCTTCCCAGGATGGGCGTGGGGGAGCCTCTCTCTCACACTCCGGGCCCCTTCCCAGGATGGGCTTGGGGGAGCCTCTCT	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9936:HG2_PB_pbsv_6407:HG4_PB_pbsv_6420:HG4_PB_SVrefine2PBcRDovetail_3188:HG3_PB_SVrefine2PBcRDovetail_2971:HG2_PB_SVrefine2PBcRplusDovetail_9257;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9936:HG4_PB_SVrefine2PBcRDovetail_3188:HG3_PB_SVrefine2PBcRDovetail_2971:HG2_PB_SVrefine2PBcRplusDovetail_9257;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0142349;ClusterMaxSizeDiff=0.0141844;ClusterMaxEditDist=0.0283688;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-141;DistBack=-95;DistForward=-142;DistMin=-142;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=327;REFWIDENED=5:179298727-179299194;PctSeqSimilarity=0.9882;PctSizeSimilarity=1;PctRecOverlap=0.1127;SizeDiff=0;StartDistance=-126;EndDistance=-126;GTMatch=0;TruScore=70;MatchId=3312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:26:0|1:20:1:3:24:./.:0:0:0:0:./.:6:1:./.:.:.:.:.:.
chr5	179523140	HG3_Ill_SVrefine2DISCOVARDovetail_4894	TCCTTCCTTCCCTCCTTCCTTCCTCCCTTCCTGTCTTCCTTCCCTCCCTCCCTCCCTTCCTTCCTGTCTTCCTCCCTTCCTTCCCTCCTTCCCTCCCTCCCTTCCTTCCTGTCTTCCTTCCTTCCTTCCTGTCTTCCTTCCCTCCCTCCCTCCCTTCCTTCCTGTCTTCCTC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9938:HG2_PB_pbsv_6410:HG2_PB_HySA_11980:HG4_PB_SVrefine2PBcRDovetail_3189:HG4_Ill_SVrefine2DISCOVARDovetail_4786:HG4_Ill_GATKHC_10862:HG4_Ill_GATKHCSBGrefine_4546:HG4_10X_allpass_1251:HG3_Ill_SVrefine2DISCOVARDovetail_4894:HG2_PB_SVrefine2PBcRplusDovetail_9260:HG2_PB_SVrefine2PB10Xhap12_4685:HG2_Ill_SVrefine2DISCOVARplusDovetail_10851:HG2_Ill_GATKHC_10776:HG2_Ill_GATKHCSBGrefine_4493:HG2_10X_SVrefine210Xhap12_4639:HG2_PB_assemblyticsPBcR_21637:HG3_PB_pbsv_6215:HG4_PB_HySA_9590:HG4_PB_pbsv_6424:HG2_PB_SVrefine2Falcon2Bionano_3209:HG3_PB_SVrefine2PBcRDovetail_2972;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4639:HG2_Ill_GATKHCSBGrefine_4493:HG2_Ill_GATKHC_10776:HG2_Ill_SVrefine2DISCOVARplusDovetail_10851:HG2_PB_SVrefine2PB10Xhap12_4685:HG2_PB_SVrefine2PBcRplusDovetail_9260:HG3_Ill_SVrefine2DISCOVARDovetail_4894:HG4_10X_allpass_1251:HG4_Ill_GATKHCSBGrefine_4546:HG4_Ill_GATKHC_10862:HG4_Ill_SVrefine2DISCOVARDovetail_4786:HG4_PB_SVrefine2PBcRDovetail_3189;NumExactMatchSVs=12;ClusterMaxShiftDist=0.322946;ClusterMaxSizeDiff=0.322946;ClusterMaxEditDist=0.322946;PBcalls=12;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-171;DistBack=40858;DistForward=-157;DistMin=-157;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=182;REFWIDENED=5:179523093-179523445;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3313.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:45:1/1:1:18:3:15:./.:0:0:0:0:1/1:0:19:./.:.:.:.:.:.
chr5	180066264	HG4_Ill_SVrefine2DISCOVARDovetail_4792	TGGATGGATGCATGGGTGGGTGGAGGAGTGGATGGGTGGGTGAGTAGAAGGATGGATGGGTGGATGGATGGACAGACAGATGAATGGATGGATGGACAGGTAGATGAGTGGATGGGTGGATGGATGGATGGATGGAC	T	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_4901:HG4_PB_HySA_9604:HG3_PB_HySA_9974:HG4_PB_pbsv_6436:HG2_PB_pbsv_6424:HG4_PB_assemblyticsfalcon_21847:HG4_PB_SVrefine2PBcRDovetail_3197:HG4_PB_SVrefine2Falcon1Dovetail_3914:HG4_Ill_SVrefine2DISCOVARDovetail_4792:HG3_PB_SVrefine2Falcon1Dovetail_4006:HG2_PB_SVrefine2PBcRplusDovetail_9271:HG2_PB_SVrefine2PB10Xhap12_4697:HG2_PB_SVrefine2Falcon2Bionano_3220:HG2_PB_SVrefine2Falcon1plusDovetail_9950:HG2_Ill_SVrefine2DISCOVARplusDovetail_10858:HG2_10X_SVrefine210Xhap12_4646:HG4_Ill_MetaSV_4352:HG3_PB_pbsv_6237;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4646:HG2_Ill_SVrefine2DISCOVARplusDovetail_10858:HG2_PB_SVrefine2Falcon1plusDovetail_9950:HG2_PB_SVrefine2Falcon2Bionano_3220:HG2_PB_SVrefine2PB10Xhap12_4697:HG2_PB_SVrefine2PBcRplusDovetail_9271:HG3_PB_SVrefine2Falcon1Dovetail_4006:HG4_Ill_SVrefine2DISCOVARDovetail_4792:HG4_PB_SVrefine2Falcon1Dovetail_3914:HG4_PB_SVrefine2PBcRDovetail_3197:HG4_PB_assemblyticsfalcon_21847;NumExactMatchSVs=11;ClusterMaxShiftDist=0.116788;ClusterMaxSizeDiff=0.116788;ClusterMaxEditDist=0.175182;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-136;DistBack=-137;DistForward=19042;DistMin=-137;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=212;REFWIDENED=5:180066062-180066409;PctSeqSimilarity=0.975;PctSizeSimilarity=1;PctRecOverlap=0.781;SizeDiff=0;StartDistance=30;EndDistance=30;GTMatch=0;TruScore=91;MatchId=3315.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:0:17:1:23:./.:0:0:0:0:1/1:0:38:./.:.:.:.:3363:.
chr6	380338	HG3_Ill_Krunchall_9028	CCTCCCCACGGTCTTCCTGGATGGGCTTCAAACCTCCTTTCTGGCCTCTACGCCCTGGGTCCCGCCCCCAGCCCAGA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_6437:HG4_Ill_manta_1616:HG3_Ill_manta_1524:HG2_Ill_manta_1850:HG4_Ill_GATKHC_10888:HG4_Ill_GATKHCSBGrefine_4557:HG3_PB_assemblyticsfalcon_22311:HG3_Ill_GATKHC_10804:HG3_Ill_GATKHCSBGrefine_4412:HG2_Ill_GATKHC_10810:HG2_Ill_GATKHCSBGrefine_4499:HG4_Ill_Krunchall_9577:HG4_PB_pbsv_6451:HG4_Ill_svaba_8428:HG4_Ill_scalpel_6259:HG4_Ill_Krunchall_9576:HG4_Ill_250bpfermikitraw_9149:HG4_Ill_150bpfermikitraw_8732:HG3_Ill_svaba_8409:HG3_Ill_Krunchall_9028:HG3_Ill_250bpfermikitraw_8761:HG3_Ill_150bpfermikitraw_8558:HG2_Ill_svaba_8318:HG2_Ill_Krunchall_9246:HG2_Ill_250bpfermikitraw_9074:HG2_Ill_150bpfermikitraw_8501;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8501:HG2_Ill_250bpfermikitraw_9074:HG2_Ill_Krunchall_9246:HG2_Ill_svaba_8318:HG3_Ill_150bpfermikitraw_8558:HG3_Ill_250bpfermikitraw_8761:HG3_Ill_Krunchall_9028:HG3_Ill_svaba_8409:HG4_Ill_150bpfermikitraw_8732:HG4_Ill_250bpfermikitraw_9149:HG4_Ill_Krunchall_9576:HG4_Ill_scalpel_6259:HG4_Ill_svaba_8428:HG4_PB_pbsv_6451;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0397351;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.0519481;PBcalls=3;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-76;DistBack=4053;DistForward=16119;DistMin=4053;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:380339-380416;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3317.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:74:32:0|1:64:3:3:21:./.:0:0:0:0:0/1:67:22:./.:.:.:.:5115:.
chr6	396793	HG3_PB_assemblyticsfalcon_22312	TAACCCCGTCTCGATGCCAGTGCTTCTTATCTCAGCCTCTCCTGCACTCCTTT	G	10	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_21863:HG3_PB_assemblyticsfalcon_22312:HG2_PB_assemblyticsPBcR_21666:HG2_PB_pbsv_6438:HG4_PB_pbsv_6452:HG2_PB_HySA_12026:HG2_PB_assemblyticsfalcon_22410:HG3_PB_pbsv_6250;NumClusterSVs=8;ExactMatchIDs=HG3_PB_assemblyticsfalcon_22312;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0576923;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-52;DistBack=-235;DistForward=0;DistMin=-235;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=520;REFWIDENED=6:396535-397106;PctSeqSimilarity=0.9934;PctSizeSimilarity=1;PctRecOverlap=0.5094;SizeDiff=0;StartDistance=26;EndDistance=26;GTMatch=0;TruScore=83;MatchId=3318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:1/1:0:19:1:13:./.:0:0:0:0:./.:5:1:./.:.:.:.:.:.
chr6	424296	HG2_PB_SVrefine2PBcRplusDovetail_9284	GTCCCGCCCTCCCCGCCGAGGAAGCCCCCCGCCGGGCCTTCCCGCCCTCCCCGCCGACGGAGCCCCCCGCCGGGCCTTCCCGCCCTCCCCGCCGACGGAGCCCCCCGCCGGGCCTTCCCGCCCTCCCCGCCGACGGAGCCCCCCGCCGGGCCTTCCCGCCCTCCCCGCCGACGGAGCCCCCCGCCGGGCCT	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9959:HG2_PB_pbsv_6440:HG4_PB_pbsv_6455:HG4_PB_SVrefine2Falcon1Dovetail_3925:HG2_PB_SVrefine2PBcRplusDovetail_9284:HG2_PB_SVrefine2PB10Xhap12_4713;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9959:HG2_PB_SVrefine2PBcRplusDovetail_9284:HG2_PB_SVrefine2PB10Xhap12_4713;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0104712;ClusterMaxSizeDiff=0.0104712;ClusterMaxEditDist=0.0262467;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-190;DistBack=4967;DistForward=-191;DistMin=-191;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=307;REFWIDENED=6:424297-424793;PctSeqSimilarity=0.9892;PctSizeSimilarity=1;PctRecOverlap=0.0366;SizeDiff=0;StartDistance=-184;EndDistance=-184;GTMatch=0;TruScore=67;MatchId=3320.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:19:./.:5:12:20:5:./.:0:0:0:0:./.:13:1:./.:.:.:.:.:.
chr6	425876	HG2_Ill_250bpfermikitraw_9075	ACTAGATACAGAGTGTCGATTGGTGCATTCACAAACCCCGAGCTAGACACAGGGTGCTGACTGATGTGTTTACAAACCTTGAG	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_9075:HG3_PB_pbsv_6254:HG2_PB_pbsv_6441:HG2_PB_HySA_12029:HG3_PB_SVrefine2PBcRDovetail_2989:HG3_Ill_manta_1525:HG3_Ill_SVrefine2DISCOVARDovetail_4910:HG3_Ill_Krunchall_9029:HG3_Ill_GATKHCSBGrefine_4413:HG3_Ill_250bpfermikitraw_8762:HG3_Ill_150bpfermikitraw_8559;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9075:HG3_PB_SVrefine2PBcRDovetail_2989:HG3_Ill_manta_1525:HG3_Ill_SVrefine2DISCOVARDovetail_4910:HG3_Ill_Krunchall_9029:HG3_Ill_GATKHCSBGrefine_4413:HG3_Ill_250bpfermikitraw_8762:HG3_Ill_150bpfermikitraw_8559;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.0243902;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-82;DistBack=-1;DistForward=14768;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=130;REFWIDENED=6:425877-426088;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:22:0|1:21:2:3:18:./.:0:0:0:0:0/1:20:20:./.:.:.:.:.:.
chr6	541555	HG2_Ill_scalpel_6380	TATCGCAGCTGAGGTTGAAGGAATAAAAATACAAACAAGCGATAGTAAGTACAAATAAGGACCAC	T	20	PASS	ClusterIDs=HG2_PB_HySA_12038:HG4_PB_HySA_9639:HG3_PB_assemblyticsfalcon_22322:HG2_PB_pbsv_6449:HG4_PB_pbsv_6464:HG4_Ill_svaba_8434:HG4_Ill_scalpel_6263:HG4_Ill_manta_1619:HG4_Ill_Krunchall_9581:HG4_Ill_GATKHC_10892:HG4_Ill_GATKHCSBGrefine_4562:HG4_Ill_250bpfermikitraw_9153:HG4_Ill_150bpfermikitraw_8735:HG2_Ill_svaba_8323:HG2_Ill_scalpel_6380:HG2_Ill_manta_1852:HG2_Ill_SpiralSDKrefine_14287:HG2_Ill_Krunchall_9252:HG2_Ill_GATKHC_10813:HG2_Ill_GATKHCSBGrefine_4502:HG2_Ill_250bpfermikitraw_9078:HG2_Ill_150bpfermikitraw_8505:HG2_10X_allpass_1075;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_1075:HG2_Ill_150bpfermikitraw_8505:HG2_Ill_250bpfermikitraw_9078:HG2_Ill_GATKHCSBGrefine_4502:HG2_Ill_GATKHC_10813:HG2_Ill_Krunchall_9252:HG2_Ill_SpiralSDKrefine_14287:HG2_Ill_manta_1852:HG2_Ill_scalpel_6380:HG2_Ill_svaba_8323:HG4_Ill_150bpfermikitraw_8735:HG4_Ill_250bpfermikitraw_9153:HG4_Ill_GATKHCSBGrefine_4562:HG4_Ill_GATKHC_10892:HG4_Ill_Krunchall_9581:HG4_Ill_manta_1619:HG4_Ill_scalpel_6263:HG4_Ill_svaba_8434;NumExactMatchSVs=18;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.110236;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-64;DistBack=4209;DistForward=25053;DistMin=4209;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=72;REFWIDENED=6:541511-541646;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:19:0|1:34:1:0:15:./.:0:0:0:0:0/1:40:22:./.:.:.:.:.:.
chr6	1210949	HG3_PB_SVrefine2Falcon1Dovetail_4036	AGTGGGAGCATAAACAGGGGGAGCATACAGGGGGAGCATAAACAGGGGGAGCATACAGGGGGAGCATAAACAGGGGGAGCATAAACAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_6470:HG3_PB_assemblyticsfalcon_22341:HG3_PB_SVrefine2Falcon1Dovetail_4036:HG3_Ill_SVrefine2DISCOVARDovetail_4919:HG2_PB_PB10Xdip_26043:HG4_Ill_GATKHC_10915:HG4_Ill_GATKHCSBGrefine_4564:HG2_PB_PB10Xdip_26044:HG4_PB_pbsv_6481:HG3_Ill_150bpfermikitraw_8574:HG4_PB_SVrefine2Falcon1Dovetail_3944;NumClusterSVs=11;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_4036:HG3_PB_assemblyticsfalcon_22341;NumExactMatchSVs=2;ClusterMaxShiftDist=0.296296;ClusterMaxSizeDiff=0.296296;ClusterMaxEditDist=0.296296;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-87;DistBack=-60;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=147;REFWIDENED=6:1210833-1211066;PctSeqSimilarity=0.9934;PctSizeSimilarity=0.9885;PctRecOverlap=0.1477;SizeDiff=1;StartDistance=74;EndDistance=75;GTMatch=0;TruScore=70;MatchId=3323.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:./.:7:20:21:4:./.:0:0:0:0:./.:6:2:./.:.:.:.:.:.
chr6	1515540	HG2_Ill_scalpel_6396	GGAGCTGCTGCTTCACACTGACTTACACGGTGAGCAGCGGCGGCAGGGGAGGAGGTGGAACCCGCGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4674:HG2_PB_HySA_12080:HG3_PB_assemblyticsfalcon_22355:HG3_PB_pbsv_6294:HG2_PB_pbsv_6481:HG3_PB_SVrefine2PBcRDovetail_3014:HG3_Ill_svaba_8437:HG3_Ill_manta_1528:HG3_Ill_SVrefine2DISCOVARDovetail_4924:HG3_Ill_Krunchall_9051:HG3_Ill_GATKHC_10837:HG3_Ill_GATKHCSBGrefine_4431:HG3_Ill_250bpfermikitraw_8783:HG3_Ill_150bpfermikitraw_8581:HG2_PB_SVrefine2Falcon2Bionano_3246:HG2_PB_SVrefine2Falcon1plusDovetail_9991:HG2_Ill_svaba_8350:HG2_Ill_scalpel_6396:HG2_Ill_manta_1854:HG2_Ill_SpiralSDKrefine_14305:HG2_Ill_SVrefine2DISCOVARplusDovetail_10877:HG2_Ill_Krunchall_9276:HG2_Ill_GATKHC_10842:HG2_Ill_GATKHCSBGrefine_4516:HG2_Ill_250bpfermikitraw_9104;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4674:HG3_PB_SVrefine2PBcRDovetail_3014:HG3_Ill_svaba_8437:HG3_Ill_manta_1528:HG3_Ill_SVrefine2DISCOVARDovetail_4924:HG3_Ill_Krunchall_9051:HG3_Ill_GATKHC_10837:HG3_Ill_GATKHCSBGrefine_4431:HG3_Ill_250bpfermikitraw_8783:HG3_Ill_150bpfermikitraw_8581:HG2_PB_SVrefine2Falcon2Bionano_3246:HG2_PB_SVrefine2Falcon1plusDovetail_9991:HG2_Ill_svaba_8350:HG2_Ill_scalpel_6396:HG2_Ill_manta_1854:HG2_Ill_SpiralSDKrefine_14305:HG2_Ill_SVrefine2DISCOVARplusDovetail_10877:HG2_Ill_Krunchall_9276:HG2_Ill_GATKHC_10842:HG2_Ill_GATKHCSBGrefine_4516:HG2_Ill_250bpfermikitraw_9104;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0149254;ClusterMaxSizeDiff=0.0148148;ClusterMaxEditDist=0.0444444;PBcalls=7;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-67;DistBack=2547;DistForward=-33;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=67;REFWIDENED=6:1515541-1515674;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:58:1|0:1:43:44:11:./.:0:0:0:0:0/1:25:18:./.:.:.:.:.:.
chr6	1745534	HG3_Ill_SVrefine2DISCOVARDovetail_4927	AGGAGAAACTTGACTGTTGGCTACTGGTGGGTCACTTGGAGAAACATGACTGTTGGCTACTGGTGGGTCACTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4678:HG2_PB_pbsv_6488:HG4_PB_pbsv_6494:HG3_PB_pbsv_6301:HG2_PB_HySA_12090:HG4_PB_SVrefine2PBcRDovetail_3232:HG4_PB_SVrefine2Falcon1Dovetail_3959:HG4_Ill_SVrefine2DISCOVARDovetail_4817:HG3_PB_SVrefine2PBcRDovetail_3017:HG3_PB_SVrefine2Falcon1Dovetail_4054:HG3_Ill_SVrefine2DISCOVARDovetail_4927:HG3_Ill_250bpfermikitraw_8786:HG3_Ill_150bpfermikitraw_8584:HG3_10X_allpass_1315:HG2_PB_SVrefine2PBcRplusDovetail_9311:HG2_PB_SVrefine2PB10Xhap12_4751:HG2_PB_SVrefine2Falcon2Bionano_3249:HG2_PB_SVrefine2Falcon1plusDovetail_9996:HG2_Ill_SpiralSDKrefine_14306:HG2_Ill_SVrefine2DISCOVARplusDovetail_10880:HG2_Ill_250bpfermikitraw_9109:HG2_Ill_150bpfermikitraw_8530;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4678:HG4_PB_SVrefine2PBcRDovetail_3232:HG4_PB_SVrefine2Falcon1Dovetail_3959:HG4_Ill_SVrefine2DISCOVARDovetail_4817:HG3_PB_SVrefine2PBcRDovetail_3017:HG3_PB_SVrefine2Falcon1Dovetail_4054:HG3_Ill_SVrefine2DISCOVARDovetail_4927:HG3_Ill_250bpfermikitraw_8786:HG3_Ill_150bpfermikitraw_8584:HG3_10X_allpass_1315:HG2_PB_SVrefine2PBcRplusDovetail_9311:HG2_PB_SVrefine2PB10Xhap12_4751:HG2_PB_SVrefine2Falcon2Bionano_3249:HG2_PB_SVrefine2Falcon1plusDovetail_9996:HG2_Ill_SpiralSDKrefine_14306:HG2_Ill_SVrefine2DISCOVARplusDovetail_10880:HG2_Ill_250bpfermikitraw_9109:HG2_Ill_150bpfermikitraw_8530;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0277778;PBcalls=12;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-72;DistBack=21679;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=101;REFWIDENED=6:1745533-1745708;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:2:25:0:26:./.:0:0:0:0:1/1:1:23:./.:.:.:.:.:.
chr6	2468636	HG3_Ill_GATKHC_10843	CGAGAGAGGGAGAGAGGGAGAGAGGGAGAGAGAGGGAGAGAGAGAGAGGGAGT	C	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_4523:HG2_PB_pbsv_6496:HG4_Ill_svaba_8465:HG4_Ill_manta_1624:HG4_Ill_Krunchall_9611:HG4_Ill_GATKHC_10929:HG4_Ill_GATKHCSBGrefine_4577:HG4_Ill_250bpfermikitraw_9178:HG3_PB_pbsv_6309:HG3_Ill_svaba_8444:HG3_Ill_scalpel_6478:HG3_Ill_Krunchall_9058:HG3_Ill_GATKHC_10843:HG3_Ill_GATKHCSBGrefine_4439:HG3_Ill_250bpfermikitraw_8790:HG3_Ill_150bpfermikitraw_8587:HG2_Ill_svaba_8359:HG2_Ill_scalpel_6403:HG2_Ill_manta_1857:HG2_Ill_SpiralSDKrefine_14315:HG2_Ill_Krunchall_9286:HG2_Ill_GATKHC_10848;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4523:HG4_Ill_svaba_8465:HG4_Ill_manta_1624:HG4_Ill_Krunchall_9611:HG4_Ill_GATKHC_10929:HG4_Ill_GATKHCSBGrefine_4577:HG4_Ill_250bpfermikitraw_9178:HG3_PB_pbsv_6309:HG3_Ill_svaba_8444:HG3_Ill_scalpel_6478:HG3_Ill_Krunchall_9058:HG3_Ill_GATKHC_10843:HG3_Ill_GATKHCSBGrefine_4439:HG3_Ill_250bpfermikitraw_8790:HG3_Ill_150bpfermikitraw_8587:HG2_Ill_svaba_8359:HG2_Ill_scalpel_6403:HG2_Ill_manta_1857:HG2_Ill_SpiralSDKrefine_14315:HG2_Ill_Krunchall_9286:HG2_Ill_GATKHC_10848;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0190476;PBcalls=2;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=-89;DistForward=-45;DistMin=-89;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:2468635-2468704;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3326.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:21:./.:21:6:19:11:./.:0:0:0:0:./.:16:2:./.:.:.:.:.:.
chr6	3310555	HG2_Ill_breakscan11_956	CCTCCCACTCGAGCACCCTGTCTCCCAGGGAGCACCCTGTCTCCCACTCGAGCACCCTGT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4769:HG3_PB_pbsv_6327:HG2_PB_pbsv_6509:HG4_Ill_svaba_8478:HG4_Ill_scalpel_6288:HG4_Ill_Krunchall_9625:HG4_Ill_GATKHC_10945:HG4_Ill_GATKHCSBGrefine_4584:HG4_Ill_250bpfermikitraw_9192:HG4_Ill_150bpfermikitraw_8773:HG3_Ill_svaba_8460:HG3_Ill_scalpel_6489:HG3_Ill_Krunchall_9072:HG3_Ill_GATKHC_10862:HG3_Ill_GATKHCSBGrefine_4443:HG3_Ill_250bpfermikitraw_8806:HG3_Ill_150bpfermikitraw_8602:HG2_Ill_svaba_8374:HG2_Ill_scalpel_6413:HG2_Ill_breakscan11_956:HG2_Ill_GATKHC_10865:HG2_Ill_GATKHCSBGrefine_4527:HG2_Ill_250bpfermikitraw_9125:HG2_Ill_150bpfermikitraw_8546:HG4_PB_pbsv_6518:HG4_Ill_SVrefine2DISCOVARDovetail_4830:HG3_Ill_SVrefine2DISCOVARDovetail_4935;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8546:HG2_Ill_250bpfermikitraw_9125:HG2_Ill_GATKHCSBGrefine_4527:HG2_Ill_GATKHC_10865:HG2_Ill_breakscan11_956:HG2_Ill_scalpel_6413:HG2_Ill_svaba_8374:HG3_Ill_150bpfermikitraw_8602:HG3_Ill_250bpfermikitraw_8806:HG3_Ill_GATKHCSBGrefine_4443:HG3_Ill_GATKHC_10862:HG3_Ill_Krunchall_9072:HG3_Ill_scalpel_6489:HG3_Ill_svaba_8460:HG4_Ill_150bpfermikitraw_8773:HG4_Ill_250bpfermikitraw_9192:HG4_Ill_GATKHCSBGrefine_4584:HG4_Ill_GATKHC_10945:HG4_Ill_Krunchall_9625:HG4_Ill_scalpel_6288:HG4_Ill_svaba_8478;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0169492;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.184874;PBcalls=4;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-59;DistBack=-60;DistForward=-47;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=177;REFWIDENED=6:3310445-3310680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:25:0|1:38:2:3:20:./.:0:0:0:0:0/1:13:8:./.:.:.:.:.:.
chr6	4050241	HG4_PB_SVrefine2Falcon1Dovetail_3978	TGGAAACAGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAATAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCACAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_957:HG4_PB_assemblyticsfalcon_21929:HG3_PB_assemblyticsfalcon_22394:HG2_PB_assemblyticsfalcon_22488:HG2_PB_assemblyticsPBcR_21731:HG4_Ill_Krunchall_9631:HG3_Ill_Krunchall_9080:HG2_Ill_Krunchall_9304:HG4_Ill_Spiral_536:HG3_Ill_Spiral_7146:HG2_PB_HySA_12124:HG4_PB_pbsv_6526:HG3_PB_pbsv_6335:HG2_PB_pbsv_6516:HG3_Ill_MetaSV_4371:HG2_Ill_tnscope_758:HG4_PB_SVrefine2PBcRDovetail_3248:HG4_PB_SVrefine2Falcon1Dovetail_3978:HG4_Ill_svaba_8483:HG4_Ill_scalpel_6291:HG4_Ill_manta_1629:HG4_Ill_SVrefine2DISCOVARDovetail_4837:HG4_Ill_MetaSV_4368:HG4_Ill_GATKHCSBGrefine_4589:HG4_10X_allpass_1258:HG3_PB_SVrefine2PBcRDovetail_3031:HG3_Ill_svaba_8467:HG3_Ill_scalpel_6496:HG3_Ill_manta_1536:HG3_Ill_SVrefine2DISCOVARDovetail_4941:HG3_Ill_GATKHCSBGrefine_4449:HG3_10X_allpass_1317:HG2_PB_SVrefine2PB10Xhap12_4775:HG2_PB_SVrefine2Falcon2Bionano_3268:HG2_PB_SVrefine2Falcon1plusDovetail_10017:HG2_Ill_svaba_8381:HG2_Ill_scalpel_6420:HG2_Ill_manta_1862:HG2_Ill_SVrefine2DISCOVARplusDovetail_10892:HG2_Ill_MetaSV_4204:HG2_Ill_GATKHCSBGrefine_4532:HG2_10X_allpass_1079:HG2_10X_SVrefine210Xhap12_4697;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4697:HG2_10X_allpass_1079:HG2_Ill_GATKHCSBGrefine_4532:HG2_Ill_MetaSV_4204:HG2_Ill_SVrefine2DISCOVARplusDovetail_10892:HG2_Ill_manta_1862:HG2_Ill_scalpel_6420:HG2_Ill_svaba_8381:HG2_PB_SVrefine2Falcon1plusDovetail_10017:HG2_PB_SVrefine2Falcon2Bionano_3268:HG2_PB_SVrefine2PB10Xhap12_4775:HG3_10X_allpass_1317:HG3_Ill_GATKHCSBGrefine_4449:HG3_Ill_SVrefine2DISCOVARDovetail_4941:HG3_Ill_manta_1536:HG3_Ill_scalpel_6496:HG3_Ill_svaba_8467:HG3_PB_SVrefine2PBcRDovetail_3031:HG4_10X_allpass_1258:HG4_Ill_GATKHCSBGrefine_4589:HG4_Ill_MetaSV_4368:HG4_Ill_SVrefine2DISCOVARDovetail_4837:HG4_Ill_manta_1629:HG4_Ill_scalpel_6291:HG4_Ill_svaba_8483:HG4_PB_SVrefine2Falcon1Dovetail_3978:HG4_PB_SVrefine2PBcRDovetail_3248;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0992;ClusterMaxSizeDiff=0.0992;ClusterMaxEditDist=0.0992;PBcalls=14;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=7251;DistForward=85242;DistMin=7251;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:4050242-4050576;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3328.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:76:1/1:3:33:0:10:./.:0:0:0:0:1/1:0:46:0/1:3:18:.:.:.
chr6	6068837	HG2_PB_SVrefine2Falcon2Bionano_3274	TCCCTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTATTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3256:HG4_Ill_Krunchall_9649:HG3_Ill_Krunchall_9095:HG2_Ill_Krunchall_9321:HG2_PB_assemblyticsfalcon_22508:HG2_PB_assemblyticsPBcR_21751:HG4_PB_assemblyticsfalcon_21952:HG3_PB_assemblyticsfalcon_22417:HG2_PB_HySA_12154:HG3_PB_HySA_10111:HG2_PB_HySA_12153:HG2_Ill_tnscope_760:HG2_Ill_MetaSV_4206:HG4_PB_pbsv_6539:HG4_PB_SVrefine2Falcon1Dovetail_3985:HG4_Ill_GATKHCSBGrefine_4601:HG4_10X_allpass_1260:HG3_PB_pbsv_6347:HG3_PB_SVrefine2PBcRDovetail_3038:HG3_Ill_scalpel_6506:HG3_Ill_SVrefine2DISCOVARDovetail_4954:HG3_Ill_GATKHCSBGrefine_4459:HG3_10X_allpass_1320:HG2_PB_pbsv_6528:HG2_PB_SVrefine2PB10Xhap12_4783:HG2_PB_SVrefine2Falcon2Bionano_3274:HG2_PB_SVrefine2Falcon1plusDovetail_10025:HG2_Ill_scalpel_6435:HG2_Ill_SVrefine2DISCOVARplusDovetail_10901:HG2_Ill_GATKHCSBGrefine_4544:HG2_10X_allpass_1081:HG2_10X_SVrefine210Xhap12_4707:HG4_Ill_Spiral_537:HG3_Ill_Spiral_7159;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4707:HG2_10X_allpass_1081:HG2_Ill_GATKHCSBGrefine_4544:HG2_Ill_SVrefine2DISCOVARplusDovetail_10901:HG2_Ill_scalpel_6435:HG2_PB_SVrefine2Falcon1plusDovetail_10025:HG2_PB_SVrefine2Falcon2Bionano_3274:HG2_PB_SVrefine2PB10Xhap12_4783:HG2_PB_pbsv_6528:HG3_10X_allpass_1320:HG3_Ill_GATKHCSBGrefine_4459:HG3_Ill_SVrefine2DISCOVARDovetail_4954:HG3_Ill_scalpel_6506:HG3_PB_SVrefine2PBcRDovetail_3038:HG3_PB_pbsv_6347:HG4_10X_allpass_1260:HG4_Ill_GATKHCSBGrefine_4601:HG4_PB_SVrefine2Falcon1Dovetail_3985:HG4_PB_pbsv_6539;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0683507;ClusterMaxSizeDiff=0.0683507;ClusterMaxEditDist=0.0683507;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-341;DistBack=19072;DistForward=-342;DistMin=-342;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:6068838-6069190;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:73:1/1:2:22:0:35:./.:0:0:0:0:1/1:0:43:0/1:3:16:.:.:.
chr6	6277340	HG2_Ill_breakscan11_960	TAAGACTGACACTGTGCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4710:HG4_PB_assemblyticsfalcon_21954:HG4_Ill_Krunchall_9651:HG3_Ill_Krunchall_9098:HG2_Ill_Krunchall_9323:HG2_PB_assemblyticsfalcon_22513:HG3_PB_pbsv_6350:HG4_PB_pbsv_6542:HG4_PB_HySA_9755:HG3_PB_HySA_10116:HG4_Ill_MetaSV_4373:HG3_Ill_MetaSV_4377:HG2_Ill_tnscope_761:HG2_Ill_MetaSV_4207:HG4_PB_SVrefine2PBcRDovetail_3258:HG4_PB_SVrefine2Falcon1Dovetail_3987:HG4_Ill_scalpel_6304:HG4_Ill_manta_1631:HG4_Ill_GATKHCSBGrefine_4603:HG4_10X_allpass_1262:HG3_PB_SVrefine2PBcRDovetail_3040:HG3_Ill_scalpel_6509:HG3_Ill_manta_1540:HG3_Ill_SVrefine2DISCOVARDovetail_4956:HG3_Ill_GATKHCSBGrefine_4461:HG3_10X_allpass_1321:HG2_PB_pbsv_6531:HG2_PB_SVrefine2Falcon1plusDovetail_10027:HG2_PB_HySA_12157:HG2_Ill_scalpel_6437:HG2_Ill_manta_1867:HG2_Ill_breakscan11_960:HG2_Ill_SpiralSDKrefine_14336:HG2_Ill_SVrefine2DISCOVARplusDovetail_10903:HG2_Ill_GATKHCSBGrefine_4546:HG2_10X_allpass_1082;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4710:HG4_PB_SVrefine2PBcRDovetail_3258:HG4_PB_SVrefine2Falcon1Dovetail_3987:HG4_Ill_scalpel_6304:HG4_Ill_manta_1631:HG4_Ill_GATKHCSBGrefine_4603:HG4_10X_allpass_1262:HG3_PB_SVrefine2PBcRDovetail_3040:HG3_Ill_scalpel_6509:HG3_Ill_manta_1540:HG3_Ill_SVrefine2DISCOVARDovetail_4956:HG3_Ill_GATKHCSBGrefine_4461:HG3_10X_allpass_1321:HG2_PB_pbsv_6531:HG2_PB_SVrefine2Falcon1plusDovetail_10027:HG2_PB_HySA_12157:HG2_Ill_scalpel_6437:HG2_Ill_manta_1867:HG2_Ill_breakscan11_960:HG2_Ill_SpiralSDKrefine_14336:HG2_Ill_SVrefine2DISCOVARplusDovetail_10903:HG2_Ill_GATKHCSBGrefine_4546:HG2_10X_allpass_1082;NumExactMatchSVs=23;ClusterMaxShiftDist=0.113281;ClusterMaxSizeDiff=0.113281;ClusterMaxEditDist=0.113281;PBcalls=12;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-262;DistBack=15084;DistForward=-248;DistMin=-248;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:6277341-6277617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3330.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:36:0|1:33:1:0:33:./.:0:0:0:0:0/1:18:24:./.:.:.:.:.:.
chr6	6613064	HG2_PB_HySA_12166	ACCTTGAGCTAGATACAGAGTGCTGATTGGTGTATTTACATTCCCTTAGCTAGACATAAAGGTTCTCCAAGTCCTCACCAGCTTAACTAGATACAGAGTGCCAATTGGTGCATTCACAAACTCTGAGCTAGACACAGGGTGCTGATTGGTGTGTTAACAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4714:HG2_PB_assemblyticsfalcon_22522:HG2_Ill_Krunchall_9336:HG4_PB_SVrefine2PBcRDovetail_3263:HG2_PB_PB10Xdip_25831:HG2_PB_SVrefine2PB10Xhap12_4788:HG4_PB_pbsv_6545:HG2_PB_pbsv_6534:HG2_PB_assemblyticsPBcR_21761:HG4_Ill_SVrefine2DISCOVARDovetail_4852:HG4_Ill_GATKHCSBGrefine_4605:HG4_10X_allpass_1263:HG2_PB_SVrefine2Falcon1plusDovetail_10030:HG2_PB_HySA_12166:HG2_Ill_SVrefine2DISCOVARplusDovetail_10908:HG2_Ill_GATKHCSBGrefine_4548:HG2_10X_allpass_1083;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4714:HG4_Ill_SVrefine2DISCOVARDovetail_4852:HG4_Ill_GATKHCSBGrefine_4605:HG4_10X_allpass_1263:HG2_PB_SVrefine2Falcon1plusDovetail_10030:HG2_PB_HySA_12166:HG2_Ill_SVrefine2DISCOVARplusDovetail_10908:HG2_Ill_GATKHCSBGrefine_4548:HG2_10X_allpass_1083;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0564263;ClusterMaxSizeDiff=0.0501567;ClusterMaxEditDist=0.15047;PBcalls=9;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-160;DistBack=14065;DistForward=11382;DistMin=11382;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=320;REFWIDENED=6:6612917-6613396;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:24:0|1:29:1:3:22:./.:0:0:0:0:0/1:31:24:./.:.:.:.:.:.
chr6	7012491	HG2_PB_SVrefine2Falcon2Bionano_3279	TGTGTATGTGTGTGTGTGTATGTATATATACATATATACATACACACACACGTATGTATATATACATATATACATACACACACGTATGTATATATACATATATACATACACACACGTATGTATATATACATATATACATACACACAC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10032:HG4_Ill_GATKHC_10998:HG4_Ill_GATKHCSBGrefine_4607:HG3_Ill_GATKHC_10914:HG3_Ill_GATKHCSBGrefine_4463:HG2_Ill_GATKHC_10923:HG2_Ill_GATKHCSBGrefine_4550:HG4_Ill_svaba_8519:HG4_10X_allpass_1264:HG3_Ill_svaba_8500:HG3_10X_allpass_1322:HG2_Ill_svaba_8419:HG3_Ill_manta_1542:HG2_Ill_manta_1868:HG3_PB_pbsv_6355:HG2_PB_pbsv_6537:HG4_PB_pbsv_6547:HG2_PB_assemblyticsfalcon_22531:HG3_PB_HySA_10135:HG2_PB_HySA_12175:HG3_Ill_MetaSV_4379:HG2_PB_assemblyticsPBcR_21771:HG3_Ill_Krunchall_9120:HG2_Ill_Krunchall_9348:HG4_Ill_SVrefine2DISCOVARDovetail_4854:HG3_PB_SVrefine2PBcRDovetail_3044:HG3_Ill_SVrefine2DISCOVARDovetail_4959:HG2_PB_SVrefine2PB10Xhap12_4790:HG2_PB_SVrefine2Falcon2Bionano_3279:HG2_Ill_SVrefine2DISCOVARplusDovetail_10912:HG2_10X_SVrefine210Xhap12_4717;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4717:HG2_Ill_SVrefine2DISCOVARplusDovetail_10912:HG2_PB_SVrefine2Falcon2Bionano_3279:HG2_PB_SVrefine2PB10Xhap12_4790:HG3_Ill_SVrefine2DISCOVARDovetail_4959:HG3_PB_SVrefine2PBcRDovetail_3044:HG4_Ill_SVrefine2DISCOVARDovetail_4854;NumExactMatchSVs=7;ClusterMaxShiftDist=0.376238;ClusterMaxSizeDiff=0.376238;ClusterMaxEditDist=0.376238;PBcalls=11;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-146;DistBack=60;DistForward=-105;DistMin=-105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=49;REFWIDENED=6:7012492-7012686;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3332.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:1:18:1:15:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr6	7717367	HG2_10X_SVrefine210Xhap12_4718	TAAAGAATGGCTAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4718:HG2_PB_pbsv_6542:HG2_PB_HySA_12187:HG4_Ill_Krunchall_9682:HG2_Ill_Krunchall_9357:HG2_PB_assemblyticsfalcon_22541:HG2_PB_assemblyticsPBcR_21778:HG4_PB_assemblyticsfalcon_21975:HG3_PB_assemblyticsfalcon_22442:HG4_PB_pbsv_6552:HG3_PB_HySA_10141:HG4_Ill_MetaSV_4376:HG2_Ill_tnscope_762:HG2_Ill_MetaSV_4209:HG4_PB_SVrefine2PBcRDovetail_3267:HG4_PB_SVrefine2Falcon1Dovetail_3992:HG4_Ill_svaba_8525:HG4_Ill_scalpel_6325:HG4_Ill_SVrefine2DISCOVARDovetail_4859:HG4_Ill_GATKHCSBGrefine_4609:HG4_10X_allpass_1265:HG3_PB_pbsv_6359:HG3_PB_SVrefine2PBcRDovetail_3046:HG3_Ill_svaba_8506:HG3_Ill_scalpel_6531:HG3_Ill_manta_1544:HG3_Ill_SVrefine2DISCOVARDovetail_4962:HG3_Ill_MetaSV_4381:HG3_Ill_GATKHCSBGrefine_4465:HG3_10X_allpass_1323:HG2_PB_SVrefine2PB10Xhap12_4792:HG2_PB_SVrefine2Falcon2Bionano_3282:HG2_PB_SVrefine2Falcon1plusDovetail_10035:HG2_Ill_svaba_8427:HG2_Ill_scalpel_6462:HG2_Ill_manta_1869:HG2_Ill_breakscan11_961:HG2_Ill_SVrefine2DISCOVARplusDovetail_10914:HG2_Ill_GATKHCSBGrefine_4552:HG2_10X_allpass_1085;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4718:HG4_PB_SVrefine2PBcRDovetail_3267:HG4_PB_SVrefine2Falcon1Dovetail_3992:HG4_Ill_svaba_8525:HG4_Ill_scalpel_6325:HG4_Ill_SVrefine2DISCOVARDovetail_4859:HG4_Ill_GATKHCSBGrefine_4609:HG4_10X_allpass_1265:HG3_PB_pbsv_6359:HG3_PB_SVrefine2PBcRDovetail_3046:HG3_Ill_svaba_8506:HG3_Ill_scalpel_6531:HG3_Ill_manta_1544:HG3_Ill_SVrefine2DISCOVARDovetail_4962:HG3_Ill_MetaSV_4381:HG3_Ill_GATKHCSBGrefine_4465:HG3_10X_allpass_1323:HG2_PB_SVrefine2PB10Xhap12_4792:HG2_PB_SVrefine2Falcon2Bionano_3282:HG2_PB_SVrefine2Falcon1plusDovetail_10035:HG2_Ill_svaba_8427:HG2_Ill_scalpel_6462:HG2_Ill_manta_1869:HG2_Ill_breakscan11_961:HG2_Ill_SVrefine2DISCOVARplusDovetail_10914:HG2_Ill_GATKHCSBGrefine_4552:HG2_10X_allpass_1085;NumExactMatchSVs=27;ClusterMaxShiftDist=0.10061;ClusterMaxSizeDiff=0.10061;ClusterMaxEditDist=0.10061;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=108411;DistForward=-319;DistMin=-319;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=6:7717368-7717719;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3333.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:22:0:23:./.:0:0:0:0:1/1:0:52:0/1:3:10:.:.:.
chr6	7741614	HG4_PB_SVrefine2PBcRDovetail_3268	GAACTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCTTGAGTAGCTGGACTACTAGGCGTGTACCACCATGCCTGGCTAGTTGTTTTAATTTTTTGTAGAGATGGGGTCTCATTATGTTGCCCAGACTAGTCTCA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10036:HG4_PB_pbsv_6553:HG2_PB_pbsv_6543:HG4_PB_SVrefine2PBcRDovetail_3268:HG4_Ill_SVrefine2DISCOVARDovetail_4860:HG4_10X_allpass_1266:HG2_PB_SVrefine2Falcon2Bionano_3283;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10036:HG4_PB_SVrefine2PBcRDovetail_3268:HG4_Ill_SVrefine2DISCOVARDovetail_4860:HG4_10X_allpass_1266:HG2_PB_SVrefine2Falcon2Bionano_3283;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0148148;ClusterMaxSizeDiff=0.0147059;ClusterMaxEditDist=0.0296296;PBcalls=5;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-136;DistBack=24229;DistForward=-136;DistMin=-136;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=161;REFWIDENED=6:7741615-7741911;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3334.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:39:0|1:35:1:2:33:./.:0:0:0:0:0/1:24:9:./.:.:.:.:.:.
chr6	8227923	HG3_PB_SVrefine2PBcRDovetail_3047	TTACTGTGAAGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCGCCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_22545:HG2_PB_HySA_12188:HG3_PB_assemblyticsfalcon_22444:HG4_PB_assemblyticsfalcon_21979:HG2_PB_assemblyticsPBcR_21782:HG3_Ill_Krunchall_9127:HG2_Ill_Krunchall_9360:HG3_PB_HySA_10143:HG3_PB_pbsv_6360:HG2_PB_pbsv_6544:HG2_Ill_breakscan11_962:HG4_PB_SVrefine2Falcon1Dovetail_3994:HG3_PB_SVrefine2PBcRDovetail_3047:HG3_Ill_scalpel_6535:HG3_Ill_manta_1545:HG3_Ill_SVrefine2DISCOVARDovetail_4963:HG3_Ill_GATKHCSBGrefine_4467:HG3_10X_allpass_1324:HG2_PB_SVrefine2PB10Xhap12_4793:HG2_Ill_scalpel_6465:HG2_Ill_manta_1870:HG2_Ill_GATKHCSBGrefine_4553:HG2_10X_allpass_1086:HG2_10X_SVrefine210Xhap12_4719:HG3_Ill_Spiral_7195:HG3_Ill_MetaSV_4382:HG2_Ill_tnscope_763:HG2_Ill_Spiral_475:HG2_Ill_MetaSV_4210:HG2_PB_SVrefine2Falcon1plusDovetail_10037;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4719:HG2_10X_allpass_1086:HG2_Ill_GATKHCSBGrefine_4553:HG2_Ill_manta_1870:HG2_Ill_scalpel_6465:HG2_PB_SVrefine2PB10Xhap12_4793:HG3_10X_allpass_1324:HG3_Ill_GATKHCSBGrefine_4467:HG3_Ill_SVrefine2DISCOVARDovetail_4963:HG3_Ill_manta_1545:HG3_Ill_scalpel_6535:HG3_PB_SVrefine2PBcRDovetail_3047:HG4_PB_SVrefine2Falcon1Dovetail_3994;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0996785;ClusterMaxSizeDiff=0.0996785;ClusterMaxEditDist=0.0996785;PBcalls=12;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=42610;DistForward=-314;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:8227924-8228257;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:41:0|1:25:0:1:40:./.:0:0:0:0:0/1:39:24:0/1:21:6:.:.:.
chr6	9014816	HG2_Ill_SVrefine2DISCOVARplusDovetail_10919	TAAAAAATGCTCCTCACAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4799:HG3_PB_pbsv_6370:HG4_PB_pbsv_6563:HG3_Ill_Krunchall_9140:HG2_Ill_Krunchall_9371:HG2_PB_SVrefine2PB10Xhap12_4800:HG4_PB_assemblyticsfalcon_21994:HG3_PB_assemblyticsfalcon_22455:HG2_PB_assemblyticsPBcR_21790:HG2_PB_SVrefine2PBcRplusDovetail_9322:HG2_PB_pbsv_6553:HG4_PB_SVrefine2Falcon1Dovetail_4000:HG4_Ill_svaba_8537:HG4_Ill_scalpel_6339:HG4_Ill_manta_1636:HG4_Ill_SVrefine2DISCOVARDovetail_4864:HG4_Ill_MetaSV_4380:HG4_Ill_GATKHC_11023:HG4_Ill_GATKHCSBGrefine_4615:HG4_10X_allpass_1268:HG3_Ill_svaba_8520:HG3_Ill_scalpel_6547:HG3_Ill_manta_1546:HG3_Ill_SVrefine2DISCOVARDovetail_4969:HG3_Ill_MetaSV_4384:HG3_Ill_GATKHC_10941:HG3_Ill_GATKHCSBGrefine_4471:HG3_10X_allpass_1326:HG2_PB_SVrefine2Falcon2Bionano_3287:HG2_Ill_svaba_8437:HG2_Ill_scalpel_6476:HG2_Ill_manta_1873:HG2_Ill_breakscan11_963:HG2_Ill_SpiralSDKrefine_14361:HG2_Ill_SVrefine2DISCOVARplusDovetail_10919:HG2_Ill_MetaSV_4212:HG2_Ill_GATKHC_10948:HG2_Ill_GATKHCSBGrefine_4557:HG2_10X_allpass_1087:HG2_10X_SVrefine210Xhap12_4724;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4724:HG2_10X_allpass_1087:HG2_Ill_GATKHCSBGrefine_4557:HG2_Ill_GATKHC_10948:HG2_Ill_MetaSV_4212:HG2_Ill_SVrefine2DISCOVARplusDovetail_10919:HG2_Ill_SpiralSDKrefine_14361:HG2_Ill_breakscan11_963:HG2_Ill_manta_1873:HG2_Ill_scalpel_6476:HG2_Ill_svaba_8437:HG2_PB_SVrefine2Falcon2Bionano_3287:HG3_10X_allpass_1326:HG3_Ill_GATKHCSBGrefine_4471:HG3_Ill_GATKHC_10941:HG3_Ill_MetaSV_4384:HG3_Ill_SVrefine2DISCOVARDovetail_4969:HG3_Ill_manta_1546:HG3_Ill_scalpel_6547:HG3_Ill_svaba_8520:HG4_10X_allpass_1268:HG4_Ill_GATKHCSBGrefine_4615:HG4_Ill_GATKHC_11023:HG4_Ill_MetaSV_4380:HG4_Ill_SVrefine2DISCOVARDovetail_4864:HG4_Ill_manta_1636:HG4_Ill_scalpel_6339:HG4_Ill_svaba_8537:HG4_PB_SVrefine2Falcon1Dovetail_4000;NumExactMatchSVs=29;ClusterMaxShiftDist=0.29703;ClusterMaxSizeDiff=0.29703;ClusterMaxEditDist=0.29703;PBcalls=11;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=23;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-108;DistBack=1425;DistForward=-30;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:9014817-9014940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3336.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:22:0|1:37:0:1:19:./.:0:0:0:0:0/1:7:18:./.:.:.:.:.:.
chr6	9569475	HG3_10X_allpass_1329	CTATATATACACTATATATAGTATATATACTATAATATATATACACTATATATAG	C	20	PASS	ClusterIDs=HG3_10X_allpass_1329:HG2_PB_HySA_12210;NumClusterSVs=2;ExactMatchIDs=HG3_10X_allpass_1329;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.0869565;PBcalls=1;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=-21;DistForward=-27;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=6:9569474-9569534;PctSeqSimilarity=0.8475;PctSizeSimilarity=0.6667;PctRecOverlap=0.6727;SizeDiff=18;StartDistance=-7;EndDistance=11;GTMatch=1;TruScore=72;MatchId=3337.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:47:./.:5:7:6:29:./.:0:0:0:0:0/1:29:14:./.:.:.:.:.:.
chr6	10070788	HG2_PB_SVrefine2PB10Xhap12_4806	TAAATGTATTACATTTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGGGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4732:HG3_PB_HySA_10172:HG4_PB_pbsv_6572:HG3_Ill_Krunchall_9153:HG2_Ill_Krunchall_9381:HG2_PB_assemblyticsfalcon_22560:HG4_PB_assemblyticsfalcon_22002:HG3_PB_assemblyticsfalcon_22468:HG2_PB_assemblyticsPBcR_21797:HG4_Ill_Krunchall_9711:HG3_PB_pbsv_6381:HG2_PB_pbsv_6561:HG4_Ill_MetaSV_4385:HG3_Ill_MetaSV_4389:HG2_Ill_tnscope_764:HG2_Ill_MetaSV_4217:HG4_PB_HySA_9803:HG4_Ill_scalpel_6346:HG4_Ill_manta_1641:HG4_Ill_GATKHCSBGrefine_4624:HG4_10X_allpass_1270:HG3_Ill_scalpel_6556:HG3_Ill_manta_1551:HG3_Ill_GATKHCSBGrefine_4482:HG3_10X_allpass_1330:HG2_Ill_scalpel_6483:HG2_Ill_manta_1877:HG2_Ill_GATKHCSBGrefine_4566:HG2_Ill_breakscan11_964:HG4_PB_SVrefine2PBcRDovetail_3277:HG4_PB_SVrefine2Falcon1Dovetail_4005:HG4_Ill_SVrefine2DISCOVARDovetail_4872:HG3_PB_SVrefine2PBcRDovetail_3059:HG3_Ill_SVrefine2DISCOVARDovetail_4979:HG2_PB_SVrefine2PBcRplusDovetail_9326:HG2_PB_SVrefine2PB10Xhap12_4806:HG2_PB_SVrefine2Falcon2Bionano_3292:HG2_PB_SVrefine2Falcon1plusDovetail_10046:HG2_PB_HySA_12215:HG2_Ill_SVrefine2DISCOVARplusDovetail_10925;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4732:HG4_PB_SVrefine2PBcRDovetail_3277:HG4_PB_SVrefine2Falcon1Dovetail_4005:HG4_Ill_SVrefine2DISCOVARDovetail_4872:HG3_PB_SVrefine2PBcRDovetail_3059:HG3_Ill_SVrefine2DISCOVARDovetail_4979:HG2_PB_SVrefine2PBcRplusDovetail_9326:HG2_PB_SVrefine2PB10Xhap12_4806:HG2_PB_SVrefine2Falcon2Bionano_3292:HG2_PB_SVrefine2Falcon1plusDovetail_10046:HG2_PB_HySA_12215:HG2_Ill_SVrefine2DISCOVARplusDovetail_10925;NumExactMatchSVs=12;ClusterMaxShiftDist=0.107843;ClusterMaxSizeDiff=0.107843;ClusterMaxEditDist=0.107843;PBcalls=17;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=18321;DistForward=2471;DistMin=2471;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=6:10070789-10071118;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9873;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=3338.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:82:1/1:0:47:2:32:./.:0:0:0:0:1/1:1:47:0/1:3:11:.:.:.
chr6	10293995	HG3_CG_vcfBeta_3700	ACAAAGTCAACTGGAGTGGAGGACTCTAGCTGGAAAGTACATGGGAAATAACAAAGAAAAGCAGGATGGGGTCAAAAGATGAAAATCTGGAATAGCCCAGGCTATTCCAGGTCTGTAGCCCTCTCAGGTCTGCGCTCTTCTCTTTC	A	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_26209:HG2_PB_HySA_12218:HG2_PB_SVrefine2PB10Xhap12_4808:HG4_Ill_Krunchall_9712:HG3_PB_HySA_10175:HG3_Ill_Krunchall_9155:HG2_Ill_Krunchall_9383:HG2_PB_HySA_12217:HG2_PB_HySA_12216:HG4_PB_pbsv_6574:HG4_PB_SVrefine2PBcRDovetail_3279:HG4_Ill_svaba_8547:HG4_Ill_MetaSV_4387:HG4_Ill_GATKHCSBGrefine_4626:HG4_10X_allpass_1272:HG3_PB_SVrefine2PBcRDovetail_3060:HG3_Ill_svaba_8531:HG3_Ill_manta_1552:HG3_Ill_MetaSV_4391:HG3_Ill_GATKHCSBGrefine_4484:HG3_CG_vcfBeta_3700:HG3_10X_allpass_1332:HG2_PB_assemblyticsPBcR_21798:HG2_PB_SVrefine2PBcRplusDovetail_9327:HG2_PB_SVrefine2PB10Xhap12_4807:HG2_Ill_svaba_8447:HG2_Ill_manta_1878:HG2_Ill_SpiralSDKrefine_14363:HG2_Ill_SVrefine2DISCOVARplusDovetail_10926:HG2_Ill_MetaSV_4218:HG2_Ill_GATKHCSBGrefine_4567:HG2_CG_vcfBeta_3872:HG2_10X_allpass_1088:HG2_10X_SVrefine210Xhap12_4733:HG3_PB_pbsv_6383:HG2_PB_pbsv_6562:HG2_Ill_Krunchall_9382:HG2_PB_PB10Xdip_26210;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4733:HG2_10X_allpass_1088:HG2_CG_vcfBeta_3872:HG2_Ill_GATKHCSBGrefine_4567:HG2_Ill_MetaSV_4218:HG2_Ill_SVrefine2DISCOVARplusDovetail_10926:HG2_Ill_SpiralSDKrefine_14363:HG2_Ill_manta_1878:HG2_Ill_svaba_8447:HG2_PB_PB10Xdip_26209:HG4_PB_pbsv_6574:HG4_PB_SVrefine2PBcRDovetail_3279:HG4_Ill_svaba_8547:HG4_Ill_MetaSV_4387:HG4_Ill_GATKHCSBGrefine_4626:HG4_10X_allpass_1272:HG3_PB_SVrefine2PBcRDovetail_3060:HG3_Ill_svaba_8531:HG3_Ill_manta_1552:HG3_Ill_MetaSV_4391:HG3_Ill_GATKHCSBGrefine_4484:HG3_CG_vcfBeta_3700:HG3_10X_allpass_1332:HG2_PB_assemblyticsPBcR_21798:HG2_PB_SVrefine2PBcRplusDovetail_9327:HG2_PB_SVrefine2PB10Xhap12_4807;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0745763;ClusterMaxSizeDiff=0.0745763;ClusterMaxEditDist=0.0890411;PBcalls=15;Illcalls=17;TenXcalls=4;CGcalls=2;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=2;HG2count=21;HG3count=10;HG4count=7;NumTechs=4;NumTechsExact=4;SVLEN=-145;DistBack=-14;DistForward=1398;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:10293996-10294142;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:21:0|1:23:0:0:20:./.:0:0:0:0:0/1:26:11:./.:.:.:.:.:.
chr6	11556091	HG3_Ill_manta_1554	TAAAGACTGAGGTACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_965:HG3_PB_HySA_10191:HG2_PB_HySA_12233:HG4_PB_pbsv_6578:HG4_Ill_Krunchall_9723:HG3_Ill_Krunchall_9171:HG2_Ill_Krunchall_9394:HG3_PB_assemblyticsfalcon_22481:HG2_PB_assemblyticsPBcR_21811:HG4_PB_assemblyticsfalcon_22013:HG2_PB_assemblyticsfalcon_22572:HG4_Ill_MetaSV_4389:HG2_Ill_tnscope_765:HG4_PB_SVrefine2PBcRDovetail_3282:HG4_PB_SVrefine2Falcon1Dovetail_4009:HG4_Ill_svaba_8560:HG4_Ill_scalpel_6356:HG4_Ill_manta_1643:HG4_Ill_SVrefine2DISCOVARDovetail_4882:HG4_Ill_GATKHCSBGrefine_4630:HG4_10X_allpass_1273:HG3_PB_pbsv_6389:HG3_PB_SVrefine2PBcRDovetail_3065:HG3_Ill_svaba_8545:HG3_Ill_scalpel_6569:HG3_Ill_manta_1554:HG3_Ill_SVrefine2DISCOVARDovetail_4991:HG3_Ill_MetaSV_4394:HG3_Ill_GATKHCSBGrefine_4490:HG3_10X_allpass_1335:HG2_PB_pbsv_6566:HG2_PB_SVrefine2PBcRplusDovetail_9331:HG2_PB_SVrefine2PB10Xhap12_4812:HG2_PB_SVrefine2Falcon2Bionano_3295:HG2_PB_SVrefine2Falcon1plusDovetail_10049:HG2_Ill_svaba_8461:HG2_Ill_scalpel_6493:HG2_Ill_manta_1880:HG2_Ill_SVrefine2DISCOVARplusDovetail_10932:HG2_Ill_MetaSV_4220:HG2_Ill_GATKHCSBGrefine_4569:HG2_10X_allpass_1089:HG2_10X_SVrefine210Xhap12_4735;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4735:HG2_10X_allpass_1089:HG2_Ill_GATKHCSBGrefine_4569:HG2_Ill_MetaSV_4220:HG2_Ill_SVrefine2DISCOVARplusDovetail_10932:HG2_Ill_manta_1880:HG2_Ill_scalpel_6493:HG2_Ill_svaba_8461:HG2_PB_SVrefine2Falcon1plusDovetail_10049:HG2_PB_SVrefine2Falcon2Bionano_3295:HG2_PB_SVrefine2PB10Xhap12_4812:HG2_PB_SVrefine2PBcRplusDovetail_9331:HG2_PB_pbsv_6566:HG3_10X_allpass_1335:HG3_Ill_GATKHCSBGrefine_4490:HG3_Ill_MetaSV_4394:HG3_Ill_SVrefine2DISCOVARDovetail_4991:HG3_Ill_manta_1554:HG3_Ill_scalpel_6569:HG3_Ill_svaba_8545:HG3_PB_SVrefine2PBcRDovetail_3065:HG3_PB_pbsv_6389:HG4_10X_allpass_1273:HG4_Ill_GATKHCSBGrefine_4630:HG4_Ill_SVrefine2DISCOVARDovetail_4882:HG4_Ill_manta_1643:HG4_Ill_scalpel_6356:HG4_Ill_svaba_8560:HG4_PB_SVrefine2Falcon1Dovetail_4009:HG4_PB_SVrefine2PBcRDovetail_3282;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0922099;ClusterMaxSizeDiff=0.0922099;ClusterMaxEditDist=0.0922099;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=10577;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:11556092-11556426;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3340.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:0:16:1:18:./.:0:0:0:0:1/1:0:59:./.:1:12:.:.:.
chr6	11616273	HG4_Ill_SVrefine2DISCOVARDovetail_4883	TAAAGAGATGGGTGCACAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_7219:HG3_PB_HySA_10192:HG2_PB_assemblyticsfalcon_22573:HG4_Ill_Krunchall_9724:HG3_Ill_Krunchall_9172:HG2_Ill_Krunchall_9395:HG2_PB_pbsv_6567:HG2_PB_HySA_12234:HG4_PB_pbsv_6579:HG4_PB_SVrefine2PBcRDovetail_3283:HG4_PB_SVrefine2Falcon1Dovetail_4010:HG4_Ill_scalpel_6357:HG4_Ill_manta_1644:HG4_Ill_SVrefine2DISCOVARDovetail_4883:HG4_Ill_MetaSV_4390:HG4_Ill_GATKHCSBGrefine_4631:HG4_CG_vcfBeta_4342:HG4_10X_allpass_1274:HG3_PB_pbsv_6390:HG3_PB_SVrefine2PBcRDovetail_3066:HG3_Ill_scalpel_6570:HG3_Ill_SVrefine2DISCOVARDovetail_4992:HG3_Ill_MetaSV_4395:HG3_Ill_GATKHCSBGrefine_4491:HG3_CG_vcfBeta_3710:HG3_10X_allpass_1336:HG2_PB_SVrefine2PBcRplusDovetail_9332:HG2_PB_SVrefine2PB10Xhap12_4813:HG2_PB_SVrefine2Falcon2Bionano_3296:HG2_PB_SVrefine2Falcon1plusDovetail_10050:HG2_Ill_scalpel_6494:HG2_Ill_manta_1881:HG2_Ill_breakscan11_966:HG2_Ill_SVrefine2DISCOVARplusDovetail_10933:HG2_Ill_MetaSV_4221:HG2_Ill_GATKHCSBGrefine_4570:HG2_10X_allpass_1090:HG2_10X_SVrefine210Xhap12_4736:HG4_Ill_Spiral_538;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4736:HG2_10X_allpass_1090:HG2_Ill_GATKHCSBGrefine_4570:HG2_Ill_MetaSV_4221:HG2_Ill_SVrefine2DISCOVARplusDovetail_10933:HG2_Ill_breakscan11_966:HG2_Ill_manta_1881:HG2_Ill_scalpel_6494:HG2_PB_SVrefine2Falcon1plusDovetail_10050:HG2_PB_SVrefine2Falcon2Bionano_3296:HG2_PB_SVrefine2PB10Xhap12_4813:HG2_PB_SVrefine2PBcRplusDovetail_9332:HG3_10X_allpass_1336:HG3_CG_vcfBeta_3710:HG3_Ill_GATKHCSBGrefine_4491:HG3_Ill_MetaSV_4395:HG3_Ill_SVrefine2DISCOVARDovetail_4992:HG3_Ill_scalpel_6570:HG3_PB_SVrefine2PBcRDovetail_3066:HG3_PB_pbsv_6390:HG4_10X_allpass_1274:HG4_CG_vcfBeta_4342:HG4_Ill_GATKHCSBGrefine_4631:HG4_Ill_MetaSV_4390:HG4_Ill_SVrefine2DISCOVARDovetail_4883:HG4_Ill_manta_1644:HG4_Ill_scalpel_6357:HG4_PB_SVrefine2Falcon1Dovetail_4010:HG4_PB_SVrefine2PBcRDovetail_3283:HG4_PB_pbsv_6579;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0226415;ClusterMaxSizeDiff=0.0226415;ClusterMaxEditDist=0.0377358;PBcalls=13;Illcalls=20;TenXcalls=4;CGcalls=2;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=2;HG2count=16;HG3count=11;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-131;DistBack=60166;DistForward=-114;DistMin=-114;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=6:11616274-11616423;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:56:1/1:2:28:2:23:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr6	11903436	HG2_Ill_manta_1882	CAAAAGTCTTTAGAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4737:HG4_Ill_Krunchall_9729:HG2_Ill_Krunchall_9398:HG4_PB_assemblyticsfalcon_22017:HG2_PB_assemblyticsfalcon_22576:HG4_Ill_Krunchall_9728:HG3_PB_assemblyticsfalcon_22485:HG2_PB_assemblyticsPBcR_21816:HG4_PB_pbsv_6580:HG4_Ill_MetaSV_4392:HG3_PB_HySA_10197:HG3_Ill_MetaSV_4396:HG2_PB_HySA_12237:HG2_Ill_tnscope_766:HG2_Ill_MetaSV_4222:HG4_PB_SVrefine2PBcRDovetail_3284:HG4_PB_SVrefine2Falcon1Dovetail_4011:HG4_Ill_svaba_8563:HG4_Ill_scalpel_6359:HG4_Ill_manta_1645:HG4_Ill_SVrefine2DISCOVARDovetail_4885:HG4_Ill_GATKHCSBGrefine_4633:HG4_10X_allpass_1275:HG3_PB_pbsv_6391:HG3_PB_SVrefine2PBcRDovetail_3067:HG3_Ill_svaba_8547:HG3_Ill_scalpel_6572:HG3_Ill_manta_1555:HG3_Ill_SVrefine2DISCOVARDovetail_4994:HG3_Ill_GATKHCSBGrefine_4492:HG3_10X_allpass_1337:HG2_PB_pbsv_6568:HG2_PB_SVrefine2PBcRplusDovetail_9333:HG2_PB_SVrefine2PB10Xhap12_4814:HG2_PB_SVrefine2Falcon2Bionano_3297:HG2_PB_SVrefine2Falcon1plusDovetail_10051:HG2_Ill_svaba_8463:HG2_Ill_scalpel_6495:HG2_Ill_manta_1882:HG2_Ill_SVrefine2DISCOVARplusDovetail_10935:HG2_Ill_GATKHCSBGrefine_4571:HG2_10X_allpass_1091;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4737:HG4_PB_SVrefine2PBcRDovetail_3284:HG4_PB_SVrefine2Falcon1Dovetail_4011:HG4_Ill_svaba_8563:HG4_Ill_scalpel_6359:HG4_Ill_manta_1645:HG4_Ill_SVrefine2DISCOVARDovetail_4885:HG4_Ill_GATKHCSBGrefine_4633:HG4_10X_allpass_1275:HG3_PB_pbsv_6391:HG3_PB_SVrefine2PBcRDovetail_3067:HG3_Ill_svaba_8547:HG3_Ill_scalpel_6572:HG3_Ill_manta_1555:HG3_Ill_SVrefine2DISCOVARDovetail_4994:HG3_Ill_GATKHCSBGrefine_4492:HG3_10X_allpass_1337:HG2_PB_pbsv_6568:HG2_PB_SVrefine2PBcRplusDovetail_9333:HG2_PB_SVrefine2PB10Xhap12_4814:HG2_PB_SVrefine2Falcon2Bionano_3297:HG2_PB_SVrefine2Falcon1plusDovetail_10051:HG2_Ill_svaba_8463:HG2_Ill_scalpel_6495:HG2_Ill_manta_1882:HG2_Ill_SVrefine2DISCOVARplusDovetail_10935:HG2_Ill_GATKHCSBGrefine_4571:HG2_10X_allpass_1091;NumExactMatchSVs=28;ClusterMaxShiftDist=0.101473;ClusterMaxSizeDiff=0.101473;ClusterMaxEditDist=0.101473;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=43;DistForward=23360;DistMin=43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:11903437-11903764;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3342.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:89:1/1:0:26:1:15:./.:0:0:0:0:1/1:0:48:./.:2:12:.:.:.
chr6	13542321	HG3_Ill_GATKHCSBGrefine_4500	GTTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAGGGTTTGTGAATGCACCAATCCACACTCTGTATCTAGCTACTCTGGTGGGGACTTGGAGAACCTTTATGTCTAGCTAGGGGATTGTAAATACACCAATCGGCACTCTGTATCTAGCTCAAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4748:HG2_PB_assemblyticsfalcon_22599:HG2_PB_assemblyticsPBcR_21837:HG4_PB_SVrefine2PBcRDovetail_3289:HG2_PB_pbsv_6581:HG3_PB_pbsv_6403:HG4_PB_pbsv_6590:HG4_Ill_GATKHCSBGrefine_4636:HG4_10X_allpass_1276:HG3_PB_HySA_10227:HG3_Ill_SVrefine2DISCOVARDovetail_5002:HG3_Ill_GATKHCSBGrefine_4500:HG3_Ill_250bpfermikitraw_8931:HG3_10X_allpass_1338:HG2_PB_SVrefine2PBcRplusDovetail_9340:HG2_PB_SVrefine2PB10Xhap12_4820:HG2_PB_SVrefine2Falcon1plusDovetail_10058:HG2_Ill_GATKHCSBGrefine_4577:HG2_10X_allpass_1092;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4748:HG4_Ill_GATKHCSBGrefine_4636:HG4_10X_allpass_1276:HG3_PB_HySA_10227:HG3_Ill_SVrefine2DISCOVARDovetail_5002:HG3_Ill_GATKHCSBGrefine_4500:HG3_Ill_250bpfermikitraw_8931:HG3_10X_allpass_1338:HG2_PB_SVrefine2PBcRplusDovetail_9340:HG2_PB_SVrefine2PB10Xhap12_4820:HG2_PB_SVrefine2Falcon1plusDovetail_10058:HG2_Ill_GATKHCSBGrefine_4577:HG2_10X_allpass_1092;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0314465;ClusterMaxSizeDiff=0.0251572;ClusterMaxEditDist=0.0880503;PBcalls=10;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=4;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-160;DistBack=13950;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=209;REFWIDENED=6:13542250-13542618;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3344.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:21:1|0:4:21:13:0:./.:0:0:0:0:0/1:35:18:./.:.:.:.:.:.
chr6	13882549	HG2_PB_pbsv_6584	AGGGGTCCTAGGACAGGTAGTCACTAGATACTTCTCCCAGCCACTAAGTTGTGACTGGGGAACTTTACTCTTTTCACATGCTTTTCTAATTATGCCTGAAAGCCCCACTCCTTTGTTAGGGAGAGACATCCTAGCAAAAGTAGGGGCCATTATACACTAGAATTAGAAGGAAAAAGGGTAAATGTATATACAGACTCTAAGTATGCTTACCTAGTCCTCCATGTCCACACAGCAATATGGAGAGAAACAGAATTCCTAACTTCTGAGGGAACACCTATCAAACATCAGGAAGCCACTAGGAGATTATTATTGGCTGTACAGAAACCTAAAGAGGTGGCAGTCTTATGTTGCCGGGGCCATCAGAAAGGAAAGGAAAGGGAAATAGAAGGGAACCGCCAAGCGGATATTAAAGCCAAAAGAGCCGCAAGGTGGGACCCTCCATTAGAAATGCTTATAGAAGGACCCCTAATATGGGGTAATCCCCTCTGGTAAACCAAGCCCCAGTACTCAGCAGAAGAAATAGAATGGGGAACCTCACGAGGACATAGTTTCCTCCCCTCAGGATGGCTAGCCACCAAAGAAGGAAAAATACTTTTGCCTGCAGCTAACCAATGGAAATTACTTAAAACCCTTCACCAAACCTTTCACTTAGGCATTGATAGCACCCATCAGATGGCCAAATCATTATTTACTGGACCAGGCCTTTTCAAAACTATCAAGCAGATAGTCAGGGCCTGTGAAGTGTGCCAAAGAAATAATCCCCTACACTTCAGGCCATACATTTCAATCCCTGTATCTTTAACCTCCTTGTTAAGTTTGTCTCTTCCAGAATTGAAGCTGTAAAACTACAAATCGTTCTTCAAATGGAGCCCCAGATGCAGTCCATGACTGAGATCTACCATGGTCCCCTGGACTGGCCTGCTAGCCAATGCTCCAATGTTGATGACATTGAAGGCACCCCTCCCGAGGAAATCTCAACTGCCCAACCCCTATTATGCCCCAATTCAGCAGGAAGCAGTTAAGAGCGGTCGTCGGCCAACCTCCCCAACAGCACTTGGGTTTTCTGTTGAGGGGGTTACTGAGAGACAGGACTAGCTAGATTTCTTAGGCCAACTAAGAATTCTTAAGCCTAGCTGGGGAAGGTGACTGCACCTACCTTTAAACACGGGGTTTGTAACTCAGCTCACACTCAACCAATCAGATAGTAAAGAGGGTTCACTAAAATACAAATTAGGCTAAAGTAGGAGGTAAAGAAATAGTCAAATCATATATCGCCTGAGAGCACAGTGGGAGGGACAATGATC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_968:HG2_10X_allpass_1093:HG2_PB_assemblyticsfalcon_22602:HG2_Ill_Krunchall_9429:HG2_Ill_tnscope_767:HG4_PB_pbsv_6592:HG4_PB_SVrefine2Falcon1Dovetail_4017:HG4_Ill_SVrefine2DISCOVARDovetail_4894:HG4_Ill_MetaSV_4396:HG4_Ill_GATKHCSBGrefine_4640:HG4_10X_allpass_1277:HG2_PB_pbsv_6584:HG2_PB_SVrefine2PB10Xhap12_4822:HG2_PB_SVrefine2Falcon1plusDovetail_10060:HG2_Ill_SpiralSDKrefine_14390:HG2_Ill_SVrefine2DISCOVARplusDovetail_10945:HG2_Ill_MetaSV_4227:HG2_Ill_GATKHCSBGrefine_4581:HG2_10X_SVrefine210Xhap12_4750;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4750:HG2_Ill_GATKHCSBGrefine_4581:HG2_Ill_MetaSV_4227:HG2_Ill_SVrefine2DISCOVARplusDovetail_10945:HG2_Ill_SpiralSDKrefine_14390:HG2_PB_SVrefine2Falcon1plusDovetail_10060:HG2_PB_SVrefine2PB10Xhap12_4822:HG2_PB_pbsv_6584:HG4_10X_allpass_1277:HG4_Ill_GATKHCSBGrefine_4640:HG4_Ill_MetaSV_4396:HG4_Ill_SVrefine2DISCOVARDovetail_4894:HG4_PB_SVrefine2Falcon1Dovetail_4017:HG4_PB_pbsv_6592;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00769231;ClusterMaxSizeDiff=0.00769231;ClusterMaxEditDist=0.00769231;PBcalls=6;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1303;DistBack=21151;DistForward=-1303;DistMin=-1303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=6:13882550-13883855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3345.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:20:0|1:42:0:1:14:./.:0:0:0:0:0/1:48:15:0/1:144:49:1333:.:.
chr6	17472269	HG3_Ill_scalpel_6616	TAATAGTGCTGAATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4767:HG3_PB_HySA_10267:HG3_PB_assemblyticsfalcon_22529:HG2_PB_assemblyticsfalcon_22631:HG3_PB_pbsv_6421:HG3_Ill_Krunchall_9228:HG2_Ill_Krunchall_9459:HG3_Ill_Spiral_7269:HG2_PB_HySA_12311:HG2_Ill_Spiral_477:HG3_Ill_MetaSV_4408:HG2_Ill_MetaSV_4233:HG4_PB_SVrefine2Falcon1Dovetail_4019:HG3_Ill_scalpel_6616:HG3_Ill_manta_1558:HG3_Ill_SVrefine2DISCOVARDovetail_5024:HG3_Ill_GATKHCSBGrefine_4521:HG3_10X_allpass_1341:HG2_PB_pbsv_6600:HG2_PB_SVrefine2PB10Xhap12_4834:HG2_PB_SVrefine2Falcon1plusDovetail_10067:HG2_Ill_manta_1888:HG2_Ill_breakscan11_969:HG2_Ill_GATKHCSBGrefine_4596:HG2_10X_allpass_1095;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4767:HG4_PB_SVrefine2Falcon1Dovetail_4019:HG3_Ill_scalpel_6616:HG3_Ill_manta_1558:HG3_Ill_SVrefine2DISCOVARDovetail_5024:HG3_Ill_GATKHCSBGrefine_4521:HG3_10X_allpass_1341:HG2_PB_pbsv_6600:HG2_PB_SVrefine2PB10Xhap12_4834:HG2_PB_SVrefine2Falcon1plusDovetail_10067:HG2_Ill_manta_1888:HG2_Ill_breakscan11_969:HG2_Ill_GATKHCSBGrefine_4596:HG2_10X_allpass_1095;NumExactMatchSVs=14;ClusterMaxShiftDist=0.100977;ClusterMaxSizeDiff=0.100977;ClusterMaxEditDist=0.100977;PBcalls=9;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=-74;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:17472270-17472598;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:44:0|1:20:0:0:34:./.:0:0:0:0:0/1:39:15:0/1:34:9:.:.:.
chr6	18943635	HG2_Ill_scalpel_6561	AACAGGGAAACAAAAACTGTAAAAATGGATTTCACTGTGACTCACTGAATT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_478:HG3_PB_HySA_10284:HG2_PB_HySA_12345:HG4_PB_assemblyticsfalcon_22090:HG3_PB_assemblyticsfalcon_22548:HG2_PB_assemblyticsfalcon_22650:HG3_CG_vcfBeta_3740:HG4_Ill_svaba_8639:HG4_Ill_scalpel_6421:HG4_Ill_Krunchall_9817:HG4_Ill_GATKHC_11151:HG4_Ill_GATKHCSBGrefine_4662:HG4_Ill_250bpfermikitraw_9346:HG4_Ill_150bpfermikitraw_8936:HG4_CG_vcfBeta_4384:HG3_Ill_svaba_8628:HG3_Ill_scalpel_6631:HG3_Ill_Krunchall_9251:HG3_Ill_GATKHC_11069:HG3_Ill_GATKHCSBGrefine_4529:HG3_Ill_FB_5999:HG3_Ill_250bpfermikitraw_8987:HG3_Ill_150bpfermikitraw_8772:HG2_PB_assemblyticsPBcR_21886:HG2_Ill_svaba_8545:HG2_Ill_scalpel_6561:HG2_Ill_Krunchall_9480:HG2_Ill_GATKHC_11083:HG2_Ill_GATKHCSBGrefine_4603:HG2_Ill_250bpfermikitraw_9300:HG2_Ill_150bpfermikitraw_8712:HG2_Ill_breakscan11_971:HG4_Ill_Spiral_544:HG3_Ill_Spiral_7290;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8712:HG2_Ill_250bpfermikitraw_9300:HG2_Ill_GATKHCSBGrefine_4603:HG2_Ill_GATKHC_11083:HG2_Ill_Krunchall_9480:HG2_Ill_scalpel_6561:HG2_Ill_svaba_8545:HG2_PB_assemblyticsPBcR_21886:HG3_Ill_150bpfermikitraw_8772:HG3_Ill_250bpfermikitraw_8987:HG3_Ill_FB_5999:HG3_Ill_GATKHCSBGrefine_4529:HG3_Ill_GATKHC_11069:HG3_Ill_Krunchall_9251:HG3_Ill_scalpel_6631:HG3_Ill_svaba_8628:HG4_CG_vcfBeta_4384:HG4_Ill_150bpfermikitraw_8936:HG4_Ill_250bpfermikitraw_9346:HG4_Ill_GATKHCSBGrefine_4662:HG4_Ill_GATKHC_11151:HG4_Ill_Krunchall_9817:HG4_Ill_scalpel_6421:HG4_Ill_svaba_8639;NumExactMatchSVs=24;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.2;PBcalls=6;Illcalls=26;TenXcalls=0;CGcalls=2;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=1;HG2count=12;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=13545;DistForward=9658;DistMin=9658;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:18943634-18943686;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3347.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:0:17:3:29:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr6	19423602	HG3_Ill_manta_1561	TTGCATTGCCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4238:HG4_Ill_Krunchall_9822:HG2_PB_assemblyticsPBcR_21892:HG2_Ill_Spiral_479:HG2_PB_assemblyticsfalcon_22656:HG4_PB_assemblyticsfalcon_22098:HG3_PB_assemblyticsfalcon_22554:HG2_PB_SVrefine2PB10Xhap12_4840:HG2_PB_PB10Xdip_25166:HG2_PB_pbsv_6609:HG3_PB_HySA_10292:HG4_PB_HySA_9903:HG4_PB_pbsv_6612:HG4_PB_SVrefine2PBcRDovetail_3304:HG4_Ill_svaba_8640:HG4_Ill_scalpel_6423:HG4_Ill_manta_1648:HG4_Ill_SVrefine2DISCOVARDovetail_4922:HG4_Ill_GATKHCSBGrefine_4664:HG4_10X_allpass_1281:HG3_PB_pbsv_6431:HG3_Ill_svaba_8629:HG3_Ill_scalpel_6635:HG3_Ill_manta_1561:HG3_Ill_GATKHCSBGrefine_4531:HG3_10X_allpass_1344:HG2_PB_SVrefine2PBcRplusDovetail_9354:HG2_PB_SVrefine2PB10Xhap12_4839:HG2_PB_SVrefine2Falcon2Bionano_3311:HG2_Ill_svaba_8546:HG2_Ill_scalpel_6562:HG2_Ill_manta_1891:HG2_Ill_SVrefine2DISCOVARplusDovetail_10971:HG2_Ill_GATKHCSBGrefine_4604:HG2_10X_allpass_1096:HG2_10X_SVrefine210Xhap12_4771:HG4_Ill_MetaSV_4404:HG3_Ill_MetaSV_4414;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4771:HG2_10X_allpass_1096:HG2_Ill_GATKHCSBGrefine_4604:HG2_Ill_SVrefine2DISCOVARplusDovetail_10971:HG2_Ill_manta_1891:HG2_Ill_scalpel_6562:HG2_Ill_svaba_8546:HG2_PB_SVrefine2Falcon2Bionano_3311:HG2_PB_SVrefine2PB10Xhap12_4839:HG2_PB_SVrefine2PBcRplusDovetail_9354:HG3_10X_allpass_1344:HG3_Ill_GATKHCSBGrefine_4531:HG3_Ill_manta_1561:HG3_Ill_scalpel_6635:HG3_Ill_svaba_8629:HG3_PB_pbsv_6431:HG4_10X_allpass_1281:HG4_Ill_GATKHCSBGrefine_4664:HG4_Ill_SVrefine2DISCOVARDovetail_4922:HG4_Ill_manta_1648:HG4_Ill_scalpel_6423:HG4_Ill_svaba_8640:HG4_PB_SVrefine2PBcRDovetail_3304:HG4_PB_pbsv_6612;NumExactMatchSVs=24;ClusterMaxShiftDist=0.108696;ClusterMaxSizeDiff=0.108696;ClusterMaxEditDist=0.108696;PBcalls=15;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-234;DistBack=183;DistForward=-223;DistMin=-223;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:19423603-19423848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:35:0|1:35:3:1:32:./.:0:0:0:0:0/1:27:13:./.:.:.:.:.:.
chr6	19676311	HG2_PB_SVrefine2PB10Xhap12_4841	GGGCCAGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACATGCTGAAAACCCGTCTCTACTAAAAAATAGAAAAAATTAGCCAGGCCTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGGGAAGCTTTCAGTGACGATCGTACCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAGAAAAAAGAAAAAATAAAATAAAATAAAAAATAAGAATGAGAAAACTTGTGACTGTAATAACTCATATACTCCTTGGTGAGTAGATGAGTTCATTAGGTCTTATGTATAGGGCACTGCCCGGTGGCAACAGGATACCTCTAGAGAGCTGCACTGTGGCCGGGCACAGTGGCTCATGCCTGTAATCCCAGCACATTGGGAGGCCAAGGTGGGTGAATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCGCCTCTACTAAAAACACAAAATTCGCTGGGCGTGGTGGCACACGCCTGTAATCCTAGTTACTCGAGAGGCTGAGGCGGCAGAATTGCTTCAACCTGGGAGGTGAAGATTGCCGTGAGCCAAGATCACACCACTGCACTCCAGCCTGGCAGACGGGACGAGACTCTGCCTAAAAAAAAAAAGAAAAAAAAAAAAGAGTTGCACAGCCTCCCATCTCTAAGCAACTTTAAGTTCATTTTCTGATTCTTTGTCTACTCTGCGTGTGCATGTGTGATGAGACCGTTTTCCCTGTTTTCCTTGGTATGTTCCCAGCTATGCCCCGGGATGTTTGGGTTCTCAGGGACACCTGCTCCTGAGCTGGGCACCATGGCCTTGGCTCATGACCCAGCCTTCAAGACACAAGCAGCGGACGTACACCCTTAAGTACCCTGGTGGGGGACCCATCACACCACCCCCTGGTGGCTCTGAAGACTAGTTAATGTTAAAAACAATTGAAATA	G	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4415:HG2_PB_pbsv_6610:HG2_10X_allpass_1097:HG3_10X_allpass_1345:HG3_Ill_GATKHCSBGrefine_4532:HG2_Ill_SpiralSDKrefine_14426:HG2_Ill_MetaSV_4239:HG2_Ill_GATKHCSBGrefine_4605:HG3_PB_pbsv_6432:HG2_PB_SVrefine2PB10Xhap12_4841:HG2_PB_SVrefine2Falcon2Bionano_3312:HG2_PB_SVrefine2Falcon1plusDovetail_10073:HG2_Ill_SVrefine2DISCOVARplusDovetail_10972:HG2_Ill_tnscope_769;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10972:HG2_PB_SVrefine2Falcon1plusDovetail_10073:HG2_PB_SVrefine2Falcon2Bionano_3312:HG2_PB_SVrefine2PB10Xhap12_4841:HG3_PB_pbsv_6432;NumExactMatchSVs=5;ClusterMaxShiftDist=0.227338;ClusterMaxSizeDiff=0.227338;ClusterMaxEditDist=0.227338;PBcalls=5;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-1042;DistBack=9467;DistForward=-1026;DistMin=-1026;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=300;REFWIDENED=6:19676312-19677653;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.9952;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=3349.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:29:0:1:26:./.:0:0:0:0:0/1:43:28:0/1:94:44:1148:.:.
chr6	19765106	HG2_PB_SVrefine2Falcon1plusDovetail_10075	GAGAAAAAAAAACTAACTGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCAATAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTGTGTGTGCGCACCGTGCGCAAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGTACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCACCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACTAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATAGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTCAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCAACACATACACTCTCCCAAGACTAAACCAGGAAGAAGCTGAATCTCTGACTAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACTTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAACCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAACCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGTCTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTGAGAGTATAATAAAAAAAAAAAAAAATAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_972:HG3_Ill_Krunchall_9260:HG2_PB_assemblyticsfalcon_22664:HG2_PB_HySA_12361:HG2_Ill_MetaSV_4240:HG3_PB_HySA_10298:HG2_Ill_tnscope_770:HG4_PB_SVrefine2Falcon1Dovetail_4023:HG3_PB_pbsv_6436:HG3_PB_SVrefine2PBcRDovetail_3075:HG3_Ill_MetaSV_4417:HG3_Ill_GATKHCSBGrefine_4535:HG2_PB_pbsv_6613:HG2_PB_SVrefine2PBcRplusDovetail_9356:HG2_PB_SVrefine2PB10Xhap12_4843:HG2_PB_SVrefine2Falcon2Bionano_3315:HG2_PB_SVrefine2Falcon1plusDovetail_10075:HG2_10X_SVrefine210Xhap12_4773;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4773:HG2_PB_SVrefine2Falcon1plusDovetail_10075:HG2_PB_SVrefine2Falcon2Bionano_3315:HG2_PB_SVrefine2PB10Xhap12_4843:HG2_PB_SVrefine2PBcRplusDovetail_9356:HG2_PB_pbsv_6613:HG3_Ill_GATKHCSBGrefine_4535:HG3_Ill_MetaSV_4417:HG3_PB_SVrefine2PBcRDovetail_3075:HG3_PB_pbsv_6436:HG4_PB_SVrefine2Falcon1Dovetail_4023;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00658762;ClusterMaxSizeDiff=0.00658762;ClusterMaxEditDist=0.00658762;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-6078;DistBack=34326;DistForward=-6062;DistMin=-6062;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=6:19765107-19771203;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:72:0|1:40:0:0:38:./.:0:0:0:0:0/1:17:7:0/1:334:212:5982:.:.
chr6	20259856	HG2_PB_pbsv_6616	TCCGGGTGGGCGTGGGCTCAGCGGGCCGGCACTCGGAGTGGCCGGCCGGCCCGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_973:HG3_PB_assemblyticsfalcon_22564:HG4_PB_assemblyticsfalcon_22105:HG2_PB_assemblyticsfalcon_22670:HG3_PB_HySA_10305:HG2_PB_HySA_12367:HG4_PB_pbsv_6616:HG4_Ill_svaba_8646:HG4_Ill_scalpel_6430:HG4_Ill_manta_1649:HG4_Ill_Krunchall_9828:HG4_Ill_GATKHC_11168:HG4_Ill_GATKHCSBGrefine_4668:HG4_Ill_250bpfermikitraw_9355:HG4_Ill_150bpfermikitraw_8943:HG4_CG_vcfBeta_4389:HG3_PB_pbsv_6440:HG3_Ill_svaba_8636:HG3_Ill_scalpel_6644:HG3_Ill_manta_1563:HG3_Ill_Krunchall_9264:HG3_Ill_GATKHC_11087:HG3_Ill_GATKHCSBGrefine_4539:HG3_Ill_250bpfermikitraw_9001:HG3_Ill_150bpfermikitraw_8784:HG3_CG_vcfBeta_3743:HG2_PB_pbsv_6616:HG2_PB_assemblyticsPBcR_21901:HG2_Ill_svaba_8553:HG2_Ill_scalpel_6571:HG2_Ill_manta_1893:HG2_Ill_SpiralSDKrefine_14429:HG2_Ill_Krunchall_9494:HG2_Ill_GATKHC_11101:HG2_Ill_GATKHCSBGrefine_4608:HG2_Ill_250bpfermikitraw_9311:HG2_Ill_150bpfermikitraw_8722:HG2_CG_vcfBeta_3918;NumClusterSVs=38;ExactMatchIDs=HG2_CG_vcfBeta_3918:HG2_Ill_150bpfermikitraw_8722:HG2_Ill_250bpfermikitraw_9311:HG2_Ill_GATKHCSBGrefine_4608:HG2_Ill_GATKHC_11101:HG2_Ill_Krunchall_9494:HG2_Ill_SpiralSDKrefine_14429:HG2_Ill_manta_1893:HG2_Ill_scalpel_6571:HG2_Ill_svaba_8553:HG2_PB_assemblyticsPBcR_21901:HG2_PB_pbsv_6616:HG3_CG_vcfBeta_3743:HG3_Ill_150bpfermikitraw_8784:HG3_Ill_250bpfermikitraw_9001:HG3_Ill_GATKHCSBGrefine_4539:HG3_Ill_GATKHC_11087:HG3_Ill_Krunchall_9264:HG3_Ill_manta_1563:HG3_Ill_scalpel_6644:HG3_Ill_svaba_8636:HG3_PB_pbsv_6440:HG4_CG_vcfBeta_4389:HG4_Ill_150bpfermikitraw_8943:HG4_Ill_250bpfermikitraw_9355:HG4_Ill_GATKHCSBGrefine_4668:HG4_Ill_GATKHC_11168:HG4_Ill_Krunchall_9828:HG4_Ill_manta_1649:HG4_Ill_scalpel_6430:HG4_Ill_svaba_8646:HG4_PB_pbsv_6616;NumExactMatchSVs=32;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0373832;PBcalls=9;Illcalls=26;TenXcalls=0;CGcalls=3;PBexactcalls=4;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=3;HG2count=15;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-53;DistBack=15089;DistForward=6593;DistMin=6593;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:20259857-20259911;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3351.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:46:1/1:1:12:0:21:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr6	20765366	HG3_PB_pbsv_6441	TGGTTACATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4777:HG2_10X_allpass_1098:HG2_PB_assemblyticsPBcR_21906:HG4_PB_assemblyticsfalcon_22108:HG3_PB_assemblyticsfalcon_22567:HG2_PB_assemblyticsfalcon_22676:HG3_Ill_Krunchall_9268:HG4_Ill_Spiral_545:HG3_Ill_Spiral_7302:HG2_PB_PB10Xdip_25173:HG2_PB_SVrefine2PB10Xhap12_4846:HG2_PB_PB10Xdip_25172:HG3_Ill_MetaSV_4418:HG2_Ill_tnscope_771:HG4_PB_pbsv_6617:HG4_Ill_scalpel_6433:HG4_Ill_manta_1650:HG4_Ill_GATKHCSBGrefine_4669:HG4_10X_allpass_1282:HG3_PB_pbsv_6441:HG3_Ill_scalpel_6647:HG3_Ill_manta_1564:HG3_Ill_SVrefine2DISCOVARDovetail_5043:HG3_Ill_GATKHCSBGrefine_4540:HG3_10X_allpass_1347:HG2_PB_pbsv_6617:HG2_PB_SVrefine2PBcRplusDovetail_9358:HG2_PB_SVrefine2PB10Xhap12_4845:HG2_PB_SVrefine2Falcon2Bionano_3317:HG2_PB_SVrefine2Falcon1plusDovetail_10077:HG2_Ill_scalpel_6574:HG2_Ill_manta_1894:HG2_Ill_breakscan11_974:HG2_Ill_SVrefine2DISCOVARplusDovetail_10978:HG2_Ill_GATKHCSBGrefine_4609;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4777:HG4_PB_pbsv_6617:HG4_Ill_scalpel_6433:HG4_Ill_manta_1650:HG4_Ill_GATKHCSBGrefine_4669:HG4_10X_allpass_1282:HG3_PB_pbsv_6441:HG3_Ill_scalpel_6647:HG3_Ill_manta_1564:HG3_Ill_SVrefine2DISCOVARDovetail_5043:HG3_Ill_GATKHCSBGrefine_4540:HG3_10X_allpass_1347:HG2_PB_pbsv_6617:HG2_PB_SVrefine2PBcRplusDovetail_9358:HG2_PB_SVrefine2PB10Xhap12_4845:HG2_PB_SVrefine2Falcon2Bionano_3317:HG2_PB_SVrefine2Falcon1plusDovetail_10077:HG2_Ill_scalpel_6574:HG2_Ill_manta_1894:HG2_Ill_breakscan11_974:HG2_Ill_SVrefine2DISCOVARplusDovetail_10978:HG2_Ill_GATKHCSBGrefine_4609;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0730159;ClusterMaxSizeDiff=0.0730159;ClusterMaxEditDist=0.0730159;PBcalls=14;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-404;DistForward=-311;DistMin=-404;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:20765367-20765698;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3352.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:46:./.:7:8:10:27:./.:0:0:0:0:0/1:31:22:0/1:17:11:.:.:.
chr6	22227472	HG3_Ill_svaba_8649	TGAAAAACTTGTGGGAGGCCGAGGCATGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACGGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAAAAAAAAAGAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_975:HG2_PB_assemblyticsPBcR_21917:HG2_PB_HySA_12385:HG3_PB_pbsv_6449:HG3_Ill_Krunchall_9279:HG2_PB_pbsv_6626:HG2_Ill_Krunchall_9507:HG4_PB_assemblyticsfalcon_22117:HG3_PB_assemblyticsfalcon_22576:HG2_PB_assemblyticsfalcon_22687:HG4_PB_pbsv_6626:HG3_PB_HySA_10326:HG4_Ill_MetaSV_4408:HG3_Ill_MetaSV_4420:HG2_Ill_tnscope_772:HG4_PB_SVrefine2PBcRDovetail_3311:HG4_PB_HySA_9923:HG4_Ill_svaba_8658:HG4_Ill_scalpel_6440:HG4_Ill_SVrefine2DISCOVARDovetail_4930:HG4_Ill_GATKHCSBGrefine_4672:HG4_10X_allpass_1284:HG3_PB_SVrefine2Falcon1Dovetail_4089:HG3_Ill_svaba_8649:HG3_Ill_scalpel_6660:HG3_Ill_manta_1566:HG3_Ill_SVrefine2DISCOVARDovetail_5050:HG3_Ill_GATKHCSBGrefine_4544:HG3_10X_allpass_1349:HG2_PB_SVrefine2PBcRplusDovetail_9363:HG2_PB_SVrefine2PB10Xhap12_4851:HG2_PB_SVrefine2Falcon2Bionano_3322:HG2_PB_SVrefine2Falcon1plusDovetail_10082:HG2_Ill_svaba_8567:HG2_Ill_scalpel_6582:HG2_Ill_manta_1895:HG2_Ill_SVrefine2DISCOVARplusDovetail_10985:HG2_Ill_MetaSV_4245:HG2_Ill_GATKHCSBGrefine_4612:HG2_10X_SVrefine210Xhap12_4781;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4781:HG2_Ill_GATKHCSBGrefine_4612:HG2_Ill_MetaSV_4245:HG2_Ill_SVrefine2DISCOVARplusDovetail_10985:HG2_Ill_manta_1895:HG2_Ill_scalpel_6582:HG2_Ill_svaba_8567:HG2_PB_SVrefine2Falcon1plusDovetail_10082:HG2_PB_SVrefine2Falcon2Bionano_3322:HG2_PB_SVrefine2PB10Xhap12_4851:HG2_PB_SVrefine2PBcRplusDovetail_9363:HG3_10X_allpass_1349:HG3_Ill_GATKHCSBGrefine_4544:HG3_Ill_SVrefine2DISCOVARDovetail_5050:HG3_Ill_manta_1566:HG3_Ill_scalpel_6660:HG3_Ill_svaba_8649:HG3_PB_SVrefine2Falcon1Dovetail_4089:HG4_10X_allpass_1284:HG4_Ill_GATKHCSBGrefine_4672:HG4_Ill_SVrefine2DISCOVARDovetail_4930:HG4_Ill_scalpel_6440:HG4_Ill_svaba_8658:HG4_PB_HySA_9923:HG4_PB_SVrefine2PBcRDovetail_3311;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0830325;ClusterMaxSizeDiff=0.0830325;ClusterMaxEditDist=0.0830325;PBcalls=16;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-282;DistBack=26040;DistForward=18237;DistMin=18237;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:22227473-22227766;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3353.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:9:0:15:./.:0:0:0:0:1/1:0:44:./.:.:.:.:.:.
chr6	23300362	HG4_10X_allpass_1285	TGAGAAAATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4783:HG2_PB_assemblyticsPBcR_21929:HG4_PB_assemblyticsfalcon_22125:HG3_PB_assemblyticsfalcon_22583:HG2_PB_assemblyticsfalcon_22698:HG4_Ill_Krunchall_9851:HG3_Ill_Krunchall_9289:HG2_Ill_Krunchall_9520:HG4_PB_HySA_9935:HG2_PB_HySA_12407:HG3_PB_pbsv_6452:HG4_PB_pbsv_6631:HG3_Ill_MetaSV_4421:HG2_Ill_tnscope_773:HG4_PB_SVrefine2PBcRDovetail_3314:HG4_Ill_scalpel_6447:HG4_Ill_SVrefine2DISCOVARDovetail_4935:HG4_Ill_MetaSV_4409:HG4_Ill_GATKHCSBGrefine_4673:HG4_10X_allpass_1285:HG3_PB_SVrefine2Falcon1Dovetail_4093:HG3_Ill_scalpel_6665:HG3_Ill_manta_1567:HG3_Ill_SVrefine2DISCOVARDovetail_5053:HG3_Ill_GATKHCSBGrefine_4545:HG3_10X_allpass_1350:HG2_PB_pbsv_6632:HG2_PB_SVrefine2PBcRplusDovetail_9366:HG2_PB_SVrefine2PB10Xhap12_4856:HG2_PB_SVrefine2Falcon2Bionano_3325:HG2_PB_SVrefine2Falcon1plusDovetail_10086:HG2_Ill_scalpel_6590:HG2_Ill_manta_1896:HG2_Ill_breakscan11_976:HG2_Ill_SVrefine2DISCOVARplusDovetail_10991:HG2_Ill_MetaSV_4248:HG2_Ill_GATKHCSBGrefine_4613;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4783:HG4_PB_SVrefine2PBcRDovetail_3314:HG4_Ill_scalpel_6447:HG4_Ill_SVrefine2DISCOVARDovetail_4935:HG4_Ill_MetaSV_4409:HG4_Ill_GATKHCSBGrefine_4673:HG4_10X_allpass_1285:HG3_PB_SVrefine2Falcon1Dovetail_4093:HG3_Ill_scalpel_6665:HG3_Ill_manta_1567:HG3_Ill_SVrefine2DISCOVARDovetail_5053:HG3_Ill_GATKHCSBGrefine_4545:HG3_10X_allpass_1350:HG2_PB_pbsv_6632:HG2_PB_SVrefine2PBcRplusDovetail_9366:HG2_PB_SVrefine2PB10Xhap12_4856:HG2_PB_SVrefine2Falcon2Bionano_3325:HG2_PB_SVrefine2Falcon1plusDovetail_10086:HG2_Ill_scalpel_6590:HG2_Ill_manta_1896:HG2_Ill_breakscan11_976:HG2_Ill_SVrefine2DISCOVARplusDovetail_10991:HG2_Ill_MetaSV_4248:HG2_Ill_GATKHCSBGrefine_4613;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0853081;ClusterMaxSizeDiff=0.0853081;ClusterMaxEditDist=0.0853081;PBcalls=15;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=7831;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:23300363-23300698;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3354.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:76:1/1:0:28:1:25:./.:0:0:0:0:1/1:0:38:0/1:2:15:.:.:.
chr6	23685987	HG3_Ill_SVrefine2DISCOVARDovetail_5055	TAAAAAAAAAACAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAACA	T	20	PASS	ClusterIDs=HG2_10X_allpass_1099:HG3_Ill_GATKHCSBGrefine_4549:HG2_Ill_GATKHCSBGrefine_4617:HG3_Ill_manta_1569:HG2_PB_SVrefine2Falcon1plusDovetail_10088:HG2_Ill_manta_1897:HG4_Ill_Spiral_546:HG3_Ill_Spiral_7318:HG2_Ill_Spiral_480:HG2_PB_assemblyticsfalcon_22703:HG4_PB_assemblyticsfalcon_22128:HG3_PB_assemblyticsfalcon_22588:HG3_Ill_MetaSV_4422:HG3_PB_HySA_10340:HG2_Ill_tnscope_774:HG3_PB_SVrefine2Falcon1Dovetail_4095:HG3_Ill_scalpel_6672:HG3_Ill_SVrefine2DISCOVARDovetail_5055:HG3_10X_allpass_1351:HG2_PB_SVrefine2PB10Xhap12_4859:HG2_PB_SVrefine2Falcon2Bionano_3327:HG2_10X_SVrefine210Xhap12_4786:HG4_PB_pbsv_6634:HG4_Ill_Krunchall_9860:HG3_PB_pbsv_6455:HG3_Ill_Krunchall_9297:HG2_PB_pbsv_6635:HG2_Ill_Krunchall_9527:HG4_10X_allpass_1286;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4786:HG2_PB_SVrefine2Falcon2Bionano_3327:HG2_PB_SVrefine2PB10Xhap12_4859:HG3_10X_allpass_1351:HG3_Ill_SVrefine2DISCOVARDovetail_5055:HG3_Ill_scalpel_6672:HG3_PB_SVrefine2Falcon1Dovetail_4095;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0726172;ClusterMaxSizeDiff=0.0726172;ClusterMaxEditDist=0.0726172;PBcalls=11;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-186;DistForward=-329;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:23685988-23686329;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.997;PctRecOverlap=0.997;SizeDiff=-1;StartDistance=0;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=3355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:20:0|1:29:1:0:17:./.:0:0:0:0:0/1:26:14:0/1:18:6:.:.:.
chr6	23743259	HG3_PB_SVrefine2Falcon1Dovetail_4097	TCACCTCTCTTACAGTAGACATTAAGCTGGGAGCTTAAAACACTGCAATGAGTTCATCAGTTTCCCTAAATTTTCCAGCATATTTAGAATAACCGACTTACCCTATCATATTCTATTTTTACACACAAAAATGTTCTGTAACAGCAACTACATGATGACGCAGATACTTGTCTTCAACAGGTTTTTTTATGATGTCTACAGGTAATAATAATTTCCATAAATTAATTGCCACTGAATTCCTAGGGCTAGCAAATCCCCTTTATCACTGGAAACAGAGTCAACAATGTCTAAACTTCATCTGATCAGAGGACCAATTTCAAGTAATCTAGAAATAGCTCATAGAATTATGCTTCAGATTCTGCCCCCTGAACCAATACTTATTAACAAATTCTTTATCAGTCAGAGTACAATTAAAGAGGCAGAACCCTTAACACAATTTGACCATAAGCAATTGTGGGAGCTGGTTGATCAGTTTGTGTAACACTTTTGTCTTCTAGCTGAAGCCCATGAGGAAGAGGACCAGGAAGGGAAGATGAATACAAAGCAGAGGAGAACAAGGATAAGCTGGAACCCACAAGTAACAGAATCTAAGTTATTTATTGCTGCATAAAAATACCCACAACCTAATGGCTTAAAACTAAGAGGACATTAACTGTGTATTATCTCTCACATATTTTGTGTGTCAGAAATTCAGGAGCAGCTCAGCTGGTCTTATAAAGTTTCAGTCAGGTGTGAACTCCAGTGTCTGTCATCTACAGGCCTGACAGGGCTGGAGTAACCATTTCCAAGACAGCTCACTCATATGACTCAATTACTGGCCGGTGATTAGAAAGAGAACCAATTTTCTCACCACACAATCTTCTTCATAGGGCTACTTGAGCGTCCTTACAATATTTCACCTAGCTTTACCCAGGGTGAAGGATCCAAGAGATAGAGCAAGCAATGAGAAAGTCACAATGCCTTTTATAACCTTAACACTGAACAACGTTTGCATCCCTTGCCAACATTTATAGGTTGAAATCCTAACTCCCAGTGTTATGGTATAAGGAGATGGGGCCTTCGGGTGAAAATTAGATCTCAGGAGCATCGCCTCCAAGTATGAGACTACTGCTCTTATTAAAGGAGACCCCAGACTTTTTAATCATCGCCATTCTAACTGCCATGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTAATGACTAGTGATGATGAGCTTTTTTTTCATGTTTGTTGGCGACATACATGTCTTCTTTTGAGAAGTGTCTGTTCATATCTTTCACCCACTTTTTGATGGGGTTGTTTTTTTCTTGTAAATTTATTTAAATTCCTTGTAGATTCTGGATATTAGACCTTTGTCAGATAGGTAGATTGCAAAATTTTTCTCCCATTCTGTTGGCTGCCTATTTACACTGATGATAGTTTCTTTTGTTGTGCAGACACTCTGTAGTTTAGTTAGATCCCAGATGCTGGTGAGGCTGTGGAGAAGCAGGAACACTTTTACACTGTTGGTGGGAGTGTGAATTAGTTCGACCACTGTGGAAGACAATGTGGCAATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATATCCAAAGAATTATAAATCATTCCACTATAAAGACACATGTACATATATGTTTATTGCAGCACTATTCACAAACGCAAAGACTTGGAACCAATCCAAATGCCCATCAATGTTAGACTGGATAAAGAAAATGTGGCACACATACCCATGGAATACTATGTAGCCATAAAAAAGAATGAGTTCATGTCCTTTGCAGGAACGTGGATGAAGCTGGAAACCATCATTCTCAGCAAACTAACACAAGAAGAGAAAACCAAACACTGCGGGTTCTCACTCATAAGTGGGAGTTGAACAATGAGAACACATGGACACAGGGAGGGGAACGTCACACTCTGGGGCCTGTCGGGGTAGTGGGGGTAGGCGAGGGAAAGCATTAGGACAAATGCCTAATGCACGTGGGGCTTAAAACCTAGATAATGGGCTGACAGGTGCAGCAAATCACCATGGCATATGTATACCTAGGTAACAAACCTGCACATTCTGCACAAGTATCCCAGAACTTAAAGTAAAAAATTTAAAATAAATAAATAAATAAAAAAGGAGATCCCAAAGAACTCTCTGGCTCTTTCTGCCATGTGAGGATACAAGGAACAGCGGGCAGTCTGCAATGTGGAAGAGGGGCTGCACCAGAAGTGGAGCATGCTGGCACCCTGATCTTGAATTTTCAGCCTCCAGACTGTGAGAAATAAATTTCTGTTGCTTCTAAGCTACCCAGGCTATGGGATTCTGTTATAGCAACCTGAACTGAATACAACACTGTGCACTATCACTTCTTTCTTATTTGTTAAAAGCAGGAACCTAAGTCCTGCCTGCACTTGAGTAGAATTAGGCTCTTCCTTTTGAAGAAAAGAATGTCAAATAATTTGTGGAAATATTTTAAACATAACATAAACATACCACGATTCCATTCTTGTGTATTTATTCAAAAGAAAGCAAGCACACGTTCACAAAAAAAGGATATATGTGAGAATGAGCATAGAAGTTTTGTTTTAAAACAGTAAAGAGCTTAGGCATCCATCAACAGAGAATGGGTAAACACACTGGTATATTCATACAATATCACGCA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_9530:HG2_Ill_tnscope_775:HG4_PB_pbsv_6637:HG4_PB_SVrefine2PBcRDovetail_3316:HG3_PB_SVrefine2Falcon1Dovetail_4097:HG2_PB_pbsv_6638:HG2_PB_SVrefine2PBcRplusDovetail_9369:HG2_PB_SVrefine2PB10Xhap12_4860:HG2_PB_SVrefine2Falcon1plusDovetail_10090:HG2_Ill_breakscan11_977:HG2_Ill_SVrefine2DISCOVARplusDovetail_10994:HG2_Ill_MetaSV_4251:HG2_10X_SVrefine210Xhap12_4788:HG2_10X_allpass_1100:HG3_PB_assemblyticsfalcon_22595:HG2_PB_assemblyticsfalcon_22708:HG2_PB_assemblyticsPBcR_21938:HG4_Ill_MetaSV_4413:HG4_Ill_Krunchall_9863:HG2_Ill_Krunchall_9531:HG4_10X_allpass_1287;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4788:HG2_Ill_MetaSV_4251:HG2_Ill_SVrefine2DISCOVARplusDovetail_10994:HG2_Ill_breakscan11_977:HG2_PB_SVrefine2Falcon1plusDovetail_10090:HG2_PB_SVrefine2PB10Xhap12_4860:HG2_PB_SVrefine2PBcRplusDovetail_9369:HG2_PB_pbsv_6638:HG3_PB_SVrefine2Falcon1Dovetail_4097:HG4_PB_SVrefine2PBcRDovetail_3316:HG4_PB_pbsv_6637;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00633147;ClusterMaxSizeDiff=0.00260756;ClusterMaxEditDist=0.0394933;PBcalls=10;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-2686;DistBack=4145;DistForward=-2686;DistMin=-2686;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:23743260-23745945;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3356.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:81:./.:39:14:3:34:./.:0:0:0:0:0/1:61:15:0/1:184:79:2674:.:.
chr6	23992423	HG2_10X_allpass_1102	ATACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAGTTATAACAAACTGTCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCATTCAAAACCACTCAACTACATGGAAACTGAACAACCTGCTCGTGAATGACTACTGGG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_6463:HG4_PB_assemblyticsfalcon_22139:HG3_PB_assemblyticsfalcon_22604:HG2_PB_assemblyticsPBcR_21944:HG3_PB_HySA_10355:HG2_PB_assemblyticsfalcon_22718:HG4_PB_HySA_9948:HG4_PB_pbsv_6643:HG2_Ill_tnscope_777:HG4_PB_SVrefine2PBcRDovetail_3321:HG4_Ill_svaba_8684:HG4_Ill_scalpel_6458:HG4_Ill_manta_1654:HG4_Ill_MetaSV_4416:HG4_Ill_GATKHCSBGrefine_4680:HG4_10X_allpass_1289:HG3_PB_SVrefine2Falcon1Dovetail_4103:HG3_Ill_svaba_8669:HG3_Ill_scalpel_6679:HG3_Ill_GATKHCSBGrefine_4555:HG3_10X_allpass_1353:HG2_PB_pbsv_6643:HG2_PB_SVrefine2PBcRplusDovetail_9373:HG2_PB_SVrefine2PB10Xhap12_4864:HG2_PB_SVrefine2Falcon2Bionano_3332:HG2_PB_SVrefine2Falcon1plusDovetail_10096:HG2_Ill_svaba_8593:HG2_Ill_scalpel_6602:HG2_Ill_manta_1899:HG2_Ill_MetaSV_4254:HG2_Ill_GATKHCSBGrefine_4622:HG2_10X_allpass_1102:HG2_10X_SVrefine210Xhap12_4792;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4792:HG2_10X_allpass_1102:HG2_Ill_GATKHCSBGrefine_4622:HG2_Ill_MetaSV_4254:HG2_Ill_manta_1899:HG2_Ill_scalpel_6602:HG2_Ill_svaba_8593:HG2_PB_SVrefine2Falcon1plusDovetail_10096:HG2_PB_SVrefine2Falcon2Bionano_3332:HG2_PB_SVrefine2PB10Xhap12_4864:HG2_PB_SVrefine2PBcRplusDovetail_9373:HG2_PB_pbsv_6643:HG3_10X_allpass_1353:HG3_Ill_GATKHCSBGrefine_4555:HG3_Ill_scalpel_6679:HG3_Ill_svaba_8669:HG3_PB_SVrefine2Falcon1Dovetail_4103:HG4_10X_allpass_1289:HG4_Ill_GATKHCSBGrefine_4680:HG4_Ill_MetaSV_4416:HG4_Ill_manta_1654:HG4_Ill_scalpel_6458:HG4_Ill_svaba_8684:HG4_PB_SVrefine2PBcRDovetail_3321;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0427553;ClusterMaxSizeDiff=0.0427553;ClusterMaxEditDist=0.0429594;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-212;DistBack=14063;DistForward=8439;DistMin=8439;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=6:23992424-23992640;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3357.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:69:./.:0:0:0:0:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr6	24811875	HG3_Ill_SVrefine2DISCOVARDovetail_5066	TCGTTTAGTACTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTAATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCATCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCATTTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGATGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGCATCCAGTTTGAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCGAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGACAAGCTTTTTGATGTGCTGCTGAATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGGACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCGTTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACTCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCACACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCTCGGTGGTATTATTGTTC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4257:HG4_PB_assemblyticsfalcon_22153:HG3_PB_assemblyticsfalcon_22618:HG2_PB_assemblyticsPBcR_21959:HG2_PB_assemblyticsfalcon_22732:HG3_Ill_Krunchall_9318:HG2_Ill_Krunchall_9546:HG4_PB_pbsv_6649:HG3_PB_pbsv_6472:HG4_10X_allpass_1290:HG3_10X_allpass_1354:HG2_PB_HySA_12444:HG2_10X_allpass_1103:HG3_Ill_MetaSV_4431:HG3_PB_HySA_10367:HG2_Ill_tnscope_778:HG4_PB_SVrefine2PBcRDovetail_3326:HG4_Ill_SVrefine2DISCOVARDovetail_4949:HG4_Ill_MetaSV_4418:HG4_Ill_GATKHCSBGrefine_4686:HG3_PB_SVrefine2Falcon1Dovetail_4110:HG3_Ill_SVrefine2DISCOVARDovetail_5066:HG3_Ill_GATKHCSBGrefine_4563:HG2_PB_pbsv_6651:HG2_PB_SVrefine2PBcRplusDovetail_9379:HG2_PB_SVrefine2PB10Xhap12_4871:HG2_PB_SVrefine2Falcon2Bionano_3336:HG2_PB_SVrefine2Falcon1plusDovetail_10104:HG2_Ill_SVrefine2DISCOVARplusDovetail_10998:HG2_Ill_GATKHCSBGrefine_4630:HG2_10X_SVrefine210Xhap12_4796:HG2_Ill_breakscan11_978;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4796:HG2_Ill_GATKHCSBGrefine_4630:HG2_Ill_SVrefine2DISCOVARplusDovetail_10998:HG2_PB_SVrefine2Falcon1plusDovetail_10104:HG2_PB_SVrefine2Falcon2Bionano_3336:HG2_PB_SVrefine2PB10Xhap12_4871:HG2_PB_SVrefine2PBcRplusDovetail_9379:HG2_PB_pbsv_6651:HG3_Ill_GATKHCSBGrefine_4563:HG3_Ill_SVrefine2DISCOVARDovetail_5066:HG3_PB_SVrefine2Falcon1Dovetail_4110:HG4_Ill_GATKHCSBGrefine_4686:HG4_Ill_MetaSV_4418:HG4_Ill_SVrefine2DISCOVARDovetail_4949:HG4_PB_SVrefine2PBcRDovetail_3326;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0678372;ClusterMaxSizeDiff=0.0678372;ClusterMaxEditDist=0.0678372;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-6075;DistBack=5097;DistForward=-6060;DistMin=-6060;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:24811876-24817966;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:104:1/1:0:27:0:37:./.:0:0:0:0:1/1:0:19:1/1:1:454:6036:.:.
chr6	25275430	HG2_PB_SVrefine2Falcon2Bionano_3339	CCTGGCCAACATGGTGAAACTCCATCTCTACTAAAAATACAAAAATTAGCCCCATGTGGTGGCACACACCTATAGTCCCAGCTACTCTCCTTGGGAGGCTGAGGCAAGAGAATCACTTGAAC	GAGTTTGAGAATCACCG	20	PASS	ClusterIDs=HG4_PB_pbsv_6654:HG4_PB_HySA_9960:HG2_PB_SVrefine2PB10Xhap12_4874:HG4_PB_SVrefine2PBcRDovetail_3329:HG2_PB_SVrefine2Falcon2Bionano_3339:HG2_10X_SVrefine210Xhap12_4797:HG4_Ill_manta_1658:HG4_Ill_Spiral_548:HG2_Ill_Spiral_482:HG2_Ill_SpiralSDKrefine_14465:HG4_Ill_svaba_8695:HG2_Ill_svaba_8609:HG2_PB_pbsv_6658:HG4_Ill_Krunchall_9878:HG2_Ill_Krunchall_9554:HG2_Ill_scalpel_6613:HG4_10X_allpass_1292:HG2_10X_allpass_1104;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4797:HG2_PB_SVrefine2Falcon2Bionano_3339:HG4_PB_SVrefine2PBcRDovetail_3329;NumExactMatchSVs=3;ClusterMaxShiftDist=0.256881;ClusterMaxSizeDiff=0.256881;ClusterMaxEditDist=0.256881;PBcalls=6;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-105;DistBack=9733;DistForward=-106;DistMin=-106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:25275430-25275551;PctSeqSimilarity=0.9362;PctSizeSimilarity=0.9524;PctRecOverlap=0.8197;SizeDiff=5;StartDistance=1;EndDistance=22;GTMatch=0;TruScore=90;MatchId=3359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:30:0|1:41:1:7:29:./.:0:0:0:0:0/1:37:23:./.:.:.:.:.:.
chr6	26276775	HG4_PB_HySA_9966	AGGTGAAAGAATATGAGAAGCATCGTGGGCAGGAAGGTCTCTCTGATTTTTCCCAACTCTTCTCCCCTGAAACAGGTCATAGGACCCTCATG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_483:HG3_PB_HySA_10375:HG4_PB_pbsv_6657:HG3_PB_pbsv_6481:HG2_PB_pbsv_6660:HG2_PB_HySA_12452:HG4_PB_SVrefine2PBcRDovetail_3331:HG4_PB_HySA_9966:HG4_Ill_SVrefine2DISCOVARDovetail_4954:HG4_Ill_GATKHCSBGrefine_4694:HG4_Ill_250bpfermikitraw_9406:HG3_PB_SVrefine2Falcon1Dovetail_4114:HG3_Ill_manta_1574:HG3_Ill_GATKHCSBGrefine_4571:HG3_Ill_250bpfermikitraw_9052:HG3_10X_allpass_1357:HG2_PB_SVrefine2PBcRplusDovetail_9382:HG2_PB_SVrefine2PB10Xhap12_4876:HG2_PB_SVrefine2Falcon2Bionano_3341:HG2_PB_SVrefine2Falcon1plusDovetail_10107:HG2_Ill_manta_1904:HG2_Ill_SpiralSDKrefine_14469:HG2_Ill_SVrefine2DISCOVARplusDovetail_11005:HG2_Ill_GATKHCSBGrefine_4637:HG2_Ill_250bpfermikitraw_9372:HG2_Ill_150bpfermikitraw_8773:HG2_10X_SVrefine210Xhap12_4800:HG4_Ill_Spiral_549:HG3_Ill_Spiral_7346;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4800:HG2_Ill_150bpfermikitraw_8773:HG2_Ill_250bpfermikitraw_9372:HG2_Ill_GATKHCSBGrefine_4637:HG2_Ill_SVrefine2DISCOVARplusDovetail_11005:HG2_Ill_SpiralSDKrefine_14469:HG2_Ill_manta_1904:HG2_PB_SVrefine2Falcon1plusDovetail_10107:HG2_PB_SVrefine2Falcon2Bionano_3341:HG2_PB_SVrefine2PB10Xhap12_4876:HG2_PB_SVrefine2PBcRplusDovetail_9382:HG3_10X_allpass_1357:HG3_Ill_250bpfermikitraw_9052:HG3_Ill_GATKHCSBGrefine_4571:HG3_Ill_manta_1574:HG3_PB_SVrefine2Falcon1Dovetail_4114:HG4_Ill_250bpfermikitraw_9406:HG4_Ill_GATKHCSBGrefine_4694:HG4_Ill_SVrefine2DISCOVARDovetail_4954:HG4_PB_HySA_9966:HG4_PB_SVrefine2PBcRDovetail_3331;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0444444;PBcalls=12;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-91;DistBack=65704;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=91;REFWIDENED=6:26276776-26276957;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:1:26:0:13:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr6	26611080	HG3_PB_SVrefine2Falcon1Dovetail_4115	CGGCCGGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAAGCTGAGCTGGGTGGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCAAACATGGTGAAATTCCTTCTCTACTGAAAATACAAAAATTAGCTGGGTGTGGTGGAGGGCGCTTGTAATCCCAGCTACTTGGGAGGTTGGGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGCTGCAGTGAGCTGAGATCGCAGCACTGCACTCCAGCCTAGGTGGCAGAGGGATGCTGTCTCAAAAAACAAAAAGTAAATAAAAATAAAAAATAAATAAAATAAAAAGAGAAGTGTCAATAGCATGGGCAGAAAAGTTGTGGAAATTTCCCAAAGGTTGTTGCTTCTGGGCTTGCAGCTGTGGCTGAGCTCTTGTCTTATATCCCAAACTGATGGAAAATGAAGGTGCTGGTGCTCTGACAGGTCCTTCTCCCACTGAACCCTAGTCAGGGGGCATTGGTTCCCTAGGGGCACTTCTGCTGCTTAACAGGCCCACTCTAAGCAGGACACTCTGACTGAGGCAGCAGTGAAGAGGTTTCGAAACCCAGGCTTACTCTGTGGTGCTGTCTCCTTTGAAGGAAAATCATGTGCCCTGAATAAAGGATCCTGGGTGTTCAGGACCAAGTATACCCCAAAAGACTGATGGCACCAGTGGTCCTACTAGGGCCTGCTTCACTGATGAATGCTCCAGAAATGGAACTCCTGACTGAGCTAGACAGACCTATCCTAAAGCACCAGTGCCTTAGGATTGGCATTTCTCCAAAAGGAAGGCTCATGGGGCTGTGCTATCAAACGCTGAGCCAGTGGCCTCATTGTCAGGTGACTGTGTGGGACCCAAGTGGCCTTCTTTCTTTCTTTTAGATTGGGCTTCTATACTAGCCTAAATATAGATGGATCAGAAGATCCAGAAGGATCTGTATATGTAGGAGAATTAAGGGTTGGGATGCTTACAGGAATTGGTTTAGAGCAGGGATGGTTGGGGACTTGGCAGACCTGTCAGCCTGAGGGGTCAGAGGTGGCTTGGTGGGGTCAGTGATGAGTAATGTGGTAGAAGCAGGAGTCAACCAGGAGTAAGTGACTGTTGGCCTCAAGTCTGAAGAGGTGCCTGGAAGTGTCTCTGACTTCGAGGACACCAAAGGGGTCAGCAAGCTGGATGTCTCCTGAGGCAAAGCAGCCACACAGGTTATCCCTCCAGTGGACTATAGGAAGGCCAGTGGGCCTGGGGTATTCTGCATCACTTTCAAGCTCTCCAGCTTGGATTAGTGCTCCCAAATGGAGGGGTAGTTGGAAATGGTGCAGTCCCAGCAGCAGGTAGGGTGACAGAAAGGATGGGCTGAGTGGCAGGCACAATCTCAGGATAGTCATTGGTGGCCTCAGTCTGCTCCTTTATGACTTCGTTGACCTACCAGAGTGCAGCTTTCTTGTCCAAGTTTTCTGCAGTGACTGCATAACCAAGTTGGGGAGTTGAAGACAGGATACCCTCCCCCTATGGCTTAGAAGGCTGTAGCAAAGTTTTGCTTTCATGAGGCCCAGAACTAACAGATGTGGGCGATGTATTCCTTGAGTTTTGCTTTGTTTTCTTCTGTGAGGGAGTGTCTGCAGCCTGAACCTCATTGTTTAATCCCTATACAGCAAAGTGTGGACAGATGTTTTTCTGTGCCTTTTTGTTTGTTTTTGAGAGGGAGTCTTGCTCTGACGCCAGGCTGGAGTTCAGTGGCATGATCTAAGCTCACTGCAACCTTAGCCTCCTGGGTTCAAGCTCTTCTGTGCCTTTTTTAGGGGAAGAGGATAATGAGTACTTTAGACATCAGGAGGGATGTGAAATTGCAAACTGGGACCTCCTCTCTTCCCTGTCTTTGAAATGTTTCCAGGAGAGCTGTAGGAGCTGCCAATGTCATTTCTGTTGGAGCTGAGGGGACCACTTGGGAATATGCTGGTCAAGGGGCTCTTGGAGGGATGATGAGACTTATTCTAGTGGTCATCTGAGCTCTGGGAATGGAGGTTTGGCTTCAAGGGACTCGGGCACCAAATAAACAGGGATCCCATTGGCTATCACAGTTGAATGTGAATATCTGGTCTCCTGGAGACTTGTTTTCCTGTCCTGGCTCAGGGAATATTGGGTCTTCCACTTTCATTTTTTTGCATTCTCTGAGGGCCTCGGTTTGATTTTTTGTGCCATAAGGGTCTGGAAGCTTTAAGGGTGCTTAGCTCAAAGTCGGCTTTGGTACTGGAAACTGGCTCACTTGGATGAGGTCAGGGGAAGCAATCTTGATGGTCACCAGGCTCCTGCAGGGTGACCTCCTGGCTAATCTGTGGAAGGGAGTGGGGCGAAACACATCAATGTATTGAACACTGCAGGGTCGTAGAGAGCCAGCGGCTGGCGGGCTTCTCCGAAAGCTCCTGGTCCCCCTAGGAAGGCGGCGGTGAGGGATCAGGCTTCTCCATGTAGAACTACCTTTGGTGAGTGATGTGGCTGGACCTGGGTTTTCGAGCTGGATACTGCCTCCAGGGAGTTTTCATTGGCTGCCGATGAGACCCCGCGCGAAGTGCACAGTGTTCTGGTGACAGGTGACCGTCAGGGATGAATGATGTGCACGGGTCTTCCGCGGCCCTGGAGCCCTTCTAGACAGCCAGCGCCCAGCACATGGGCACTAGGGACCACTGAGGTATAGCGACAACCCCAAAGAGCGTCCCCAGCCCCAGCTCTGCCACCCCCGTCCCCACCAGTTTCTCGTCCAGCCATCTCATTTATCACTTGCCTTAGCGAGGGCTTGGGAGACACCAAAGGAAAACAAACCCTGCGAAAGAGGAGCCCGGGCATCAGGACTGATAGGCCTACCCGGCTGCCTCATCTCCCGCTCCTGCTTAACTGCTGGAAGTCTCAGATTTGGGTTCCCGGGCACACGGGAACTCTCCCTCCGCGCTGTCCGGACCCTAAAGGCAAGTTGCCGGGGAAGGTTCCTTAACAAACAGCGGGCTTCCCGGTAGCCGGGTTCCCAGCCCAAGAACCTTCTCATTCACCTGCGCAGCGCCGCGGGACCTCACCCTTCCGGTGTGGTGCCAAGATCCAGACTGCCTGACTTGTTTTCGTGCCGCCGGACGGTGTGTTTAATCGATGCTGATGTTTTACTCTCTAGTTTGAGGACCCAGCGACAGGGCTTTAGCCCCTCTTCCTGCAGCTGCGGATAACAGACATTGGCTCTTTGGGAATTGCAGCGCGCTAGCCCAGGAGCGCCGCGCTGTCTGGGGACTGTGGGGCAGTGGTCCCTCGGGGCGGACAGAGCTTGGGTACAGGGGGCTCGCGCTCCCTGATCCCGGCTTCAAGGTTCAGCTTGAAGAGAGTCGGTTTACCTTTCCACCCACACCGGGCCCTGGTGCGGGTCGAAGGCCACAGGCTGAGAATTTGCTGGGAGGGGTCGGGAAGAAGCGTAGGAGCGCTGACCGCCTCCCCTTCCTCTTTCTCTGTCTTTGCGGGCGGCGCTACTTCCCTTTCCCGAATTCCGAGCCCCCCTCTCCAGGTCAAATGCTCGGCGCGGCCTTTCCGAGACTACCCGAGAAATTCTGACGGTGAGCGCCAGACAGCGGCGTGGTAGCGGCCTTCCAGGGAACTGCCTCTCGGGAGAGGAGGGGACGGGCGGGGAGAGGCCCTTGGCCCCTCTCATTCCCTGAGTCCCTGCGGCGGCGCCCCTCTTGGAGCTTGAGACCTCAGGGATTGAGGATCGCGGGGAGCCTCGGACACAGCAGGCAGGTGGTGTGGAAGGTGCCACCTTCATTCTTCGGTCTCTGGGGGCTCTGGCTTTTTCTTCTTACTGCCCATCGCTGGCGATCCCGGGGGGAAAGGGTCAAATGGCAAACTCTCTCGCAGGAAAATTCAAGTTTCCAGGGTTTTTGCCCCACAGGTCTTTAGAAATTTTTCGTTGAGTGAAAATTCTTCCTGGGTCCCTCTTCCTTCACGTCTCTCTCACCTATGACAACTTCAGATTGTGCACCAAGGATGGGAGGGAAGTTATCGGGAAAGGACAAGATTATATTTAGAATTCACTGGGGAGGTGGTGATTTCTGAAGACAGACCATGGGATCTTGGTCCTGTGCTTCTCAGGAGTCAGATGTGGAGCTGCTTTTGCCCTTGCTCTCGCACTGATCTCCCATAGGATCTGCATCTCCAGCCTCTCCAAACTCCAACTCATCCTACGCGGGACATCAAACCCACCTTTATACTGCCCAACGATAAAAAAATTGTTATTTCAAGGGCTCCTCAACCTTTGGATACAAAATGAGTTATCAGTAAAGCTAATTGGGATATTCCCAACTCACAGACCCCAGGGAGCAGCAGGGGGTGAGGAAGGATTTAGCAGCAGGACATCAACACCGGGGCGAGCAGTGCAGGCCTGATGGAGATGTGGCAGGGAGACACCTCAGTGCTGGAAGTCTGGATAAGGCACCAAGACCTCAGCACAGATCTGGGGTGTGTTCACAGTGGGCTTCTTTATTAGAGTGGAGAGTGGAAAATGGAAACAATGGAAATATCCAAAAAAAAATTGGAGTGTTTAATTAATATAAAGATAATTTAGATAAAGTCATGTGATGGGAAAACAGACAAGACAGACTGTGTGTGTGAGTGTTCTGTATCTTGTCCCTGATACACAGTATATTATGTAAATCATACTTCTATTTATATTTTAAAATGGCTATTGATATATAGATAGAGATGTGTTTACAAAGGCATAAAAGAACAATTGAAAGGATATAGATTGAACTGTAATAAAGTGATTAACTCTGGTTTGGGACTGGATTGGGAGGAATGGCAATGTTATAGTGGTATATTGTTCCAAATTTTCTACTTGTATTATATCTTTCCAGTAACAAAACAGTGAACATAATTATAATTTTATTTATTTATTTATTTTTGAGACAGAGTTTTGTTTTTGTTGCCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCACAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCATGCCTAGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTTTTGAACTCCCAACCTCAGGTGATCCACCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCCAGCCATAATTTTAATTTTAAAGGCAAAGAAAAAAAGAGTTCATTTTGGCAACTTGGAAGAATGGATTGGAAACCAAGAGTTTGGAGGCTGAGATGTGAAACAGTTCATTGGAAGAGTCAACATTATCCTGATATCAAGATCAAATAAAGACAGTACAGGAAAAGAAAAACTACTACTATCCTTCATAAATATAGACACAAAAATTCCCAGCAAAATAATAGGAATTTGAATCTGGCAATATATATTTAGAAATACAATTAGGAAAAAGGTAAGGATGTCCCTCTCATCACTCCTTTTCAGCATTTTACTGGAAGTTCTAGCTAATGCAATAAGACAAGAAAAGAAAATATAAGGTATACAGATTGGAAAGGAAGAAATAAAAACTGTCTTTGTTCACAGTATTGTCTATGTAGAAAATCTGAAAGAACTGAAAAAAATTCTTGGAACTAATAAGTGATTATAGCAATGTTGCAGGATATAAGGTTAATATACAAAAGTGAAATGTTTTCTATATACCAACAAAAAACAAGTTGAATTTGAAATTAAAAACACAATACCATTTACACCCACCCAAAATGAACATTAAATGCATACCACTAAGTGAAAAAGGCCAATTTGAAAAGGCTACATCCTGTATGATTCCAAATAATGTATATGACATTCTGGAAAAGGCAAAACTATATGAAGACAATGTAAGAACCAGTGGTTTCTAGGAGTTAAGAGTAAGGGAGGGTAGTAGGGAGGGATGAATAGACAAAGTACAGAGGATTTTAGGGAAAAACTGTTCTATATGATACTATTATGGTGGATACATGTCATTATACATTTGTCAAAGTCCATGGAATGTACAATACCAAGAGTGAACTTTAATGTAAACTATAGACTTTGAGTGATAGTGATGTGTCAGTGTAGGCTCACCAATTTTAACAAATGTACCACTCTGGTACAGGATGTTGATAGTGGAGGAGGTTCTGCATAGTGGAGGAGGTAGCAGGTATGTCGGAATTCTCTGTACTTTCTGCTCAATTTTGCTGTAAACCTAAAACTTCTCTAAAAAATAAATCTATTTAAAAACGCACCACTGGTAAATGGGGTTAATCCCTTAAGTGCAAGGCTGTTTGAATATTTGAAAATCAATCAATATTCTCTACTACATTAACAGATTAAAAAAGAAAATCACATTATCATATCAATGAATGTGAAAAAGCATTTGACAAAAATCAACCACCATTCATGATTAAAACTTTCAGCAAACTAGGAGGAGTTTGCTGTTCCTAGCAACTATTTTTGACCTAATAAATGACATCTACAAATTATGTATATTAGACAGCATATTTAATGGCAAAAGACTGAATGCTTTTCCTGAAGTTCAGGTACAAGTTAAAGATGCCCACTATCATCACTCTTATTCAATGTCTTACTGATATTTTTGACAGTGTAATAAGGCAAGAAATTGGCATAAAAAGTGGAAAGGAAGCAATAAAAAATGTTCCCATTCACAGATGACATTTCTGTCTACATAGAAAATCCAAGGAAATCTATAAAAAGTTCTTAGCACT	C	20	PASS	ClusterIDs=HG4_Ill_MetaSV_4421:HG2_10X_allpass_1105:HG2_PB_pbsv_6662:HG4_10X_allpass_1294:HG4_Ill_Krunchall_9888:HG2_Ill_breakscan11_979:HG2_Ill_SpiralSDKrefine_14473:HG2_Ill_tnscope_779:HG2_Ill_MetaSV_4260:HG4_PB_pbsv_6659:HG4_PB_SVrefine2PBcRDovetail_3332:HG4_PB_SVrefine2Falcon1Dovetail_4028:HG3_PB_SVrefine2Falcon1Dovetail_4115:HG2_PB_SVrefine2PBcRplusDovetail_9384:HG2_PB_SVrefine2PB10Xhap12_4880:HG2_PB_SVrefine2Falcon2Bionano_3343:HG2_10X_SVrefine210Xhap12_4802;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4802:HG2_PB_SVrefine2Falcon2Bionano_3343:HG2_PB_SVrefine2PB10Xhap12_4880:HG2_PB_SVrefine2PBcRplusDovetail_9384:HG3_PB_SVrefine2Falcon1Dovetail_4115:HG4_PB_SVrefine2Falcon1Dovetail_4028:HG4_PB_SVrefine2PBcRDovetail_3332;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0476469;ClusterMaxSizeDiff=0.0476469;ClusterMaxEditDist=0.0476469;PBcalls=8;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-6782;DistBack=30096;DistForward=-1819;DistMin=-1819;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=256;REFWIDENED=6:26611081-26618118;PctSeqSimilarity=0.8959;PctSizeSimilarity=0.9999;PctRecOverlap=0.9767;SizeDiff=1;StartDistance=-158;EndDistance=-157;GTMatch=0;TruScore=95;MatchId=3361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:64:60:0|1:38:1:4:23:./.:0:0:0:0:0/0:75:1:0/1:386:187:6814:.:.
chr6	27348468	HG4_Ill_scalpel_6482	CTAGACACAAAGGTTCTCCACGTCCCCACCAGATTAGCTAGATACAGAGGG	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_21985:HG4_PB_assemblyticsfalcon_22173:HG3_PB_assemblyticsfalcon_22639:HG2_PB_assemblyticsfalcon_22755:HG3_PB_HySA_10392:HG4_Ill_GATKHC_11246:HG4_Ill_GATKHCSBGrefine_4699:HG3_Ill_GATKHC_11168:HG3_Ill_GATKHCSBGrefine_4576:HG2_Ill_GATKHC_11185:HG2_Ill_GATKHCSBGrefine_4643:HG2_Ill_manta_1908:HG4_PB_HySA_9981:HG4_Ill_svaba_8714:HG4_Ill_scalpel_6482:HG4_Ill_Krunchall_9899:HG4_Ill_250bpfermikitraw_9419:HG4_Ill_150bpfermikitraw_9002:HG3_Ill_svaba_8697:HG3_Ill_scalpel_6705:HG3_Ill_Krunchall_9341:HG3_Ill_250bpfermikitraw_9066:HG3_Ill_150bpfermikitraw_8842:HG2_Ill_svaba_8624:HG2_Ill_scalpel_6630:HG2_Ill_Krunchall_9571:HG2_Ill_250bpfermikitraw_9387:HG2_Ill_150bpfermikitraw_8786;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8786:HG2_Ill_250bpfermikitraw_9387:HG2_Ill_Krunchall_9571:HG2_Ill_scalpel_6630:HG2_Ill_svaba_8624:HG3_Ill_150bpfermikitraw_8842:HG3_Ill_250bpfermikitraw_9066:HG3_Ill_Krunchall_9341:HG3_Ill_scalpel_6705:HG3_Ill_svaba_8697:HG4_Ill_150bpfermikitraw_9002:HG4_Ill_250bpfermikitraw_9419:HG4_Ill_Krunchall_9899:HG4_Ill_scalpel_6482:HG4_Ill_svaba_8714;NumExactMatchSVs=15;ClusterMaxShiftDist=0.040404;ClusterMaxSizeDiff=0.04;ClusterMaxEditDist=0.16;PBcalls=6;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=110155;DistForward=41408;DistMin=41408;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=98;REFWIDENED=6:27348469-27348616;PctSeqSimilarity=0.981;PctSizeSimilarity=0.98;PctRecOverlap=0.9412;SizeDiff=1;StartDistance=-3;EndDistance=-2;GTMatch=0;TruScore=96;MatchId=3362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:57:1/1:1:19:0:8:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr6	28190195	HG2_Ill_SVrefine2DISCOVARplusDovetail_11016	TTATTATCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4262:HG2_10X_allpass_1107:HG4_Ill_Krunchall_9906:HG2_Ill_Krunchall_9574:HG4_PB_assemblyticsfalcon_22181:HG4_Ill_Spiral_550:HG2_Ill_breakscan11_980:HG2_PB_pbsv_6675:HG4_PB_HySA_9989:HG4_PB_pbsv_6673:HG4_PB_SVrefine2PBcRDovetail_3339:HG4_PB_SVrefine2Falcon1Dovetail_4035:HG4_Ill_scalpel_6491:HG4_Ill_manta_1663:HG4_Ill_SVrefine2DISCOVARDovetail_4968:HG4_Ill_GATKHCSBGrefine_4703:HG4_10X_allpass_1296:HG2_PB_SVrefine2Falcon1plusDovetail_10115:HG2_Ill_scalpel_6635:HG2_Ill_manta_1910:HG2_Ill_SpiralSDKrefine_14487:HG2_Ill_SVrefine2DISCOVARplusDovetail_11016:HG2_Ill_GATKHCSBGrefine_4646:HG2_10X_SVrefine210Xhap12_4809:HG4_Ill_MetaSV_4426:HG2_Ill_tnscope_780;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4809:HG2_Ill_GATKHCSBGrefine_4646:HG2_Ill_SVrefine2DISCOVARplusDovetail_11016:HG2_Ill_SpiralSDKrefine_14487:HG2_Ill_manta_1910:HG2_Ill_scalpel_6635:HG2_PB_SVrefine2Falcon1plusDovetail_10115:HG4_10X_allpass_1296:HG4_Ill_GATKHCSBGrefine_4703:HG4_Ill_SVrefine2DISCOVARDovetail_4968:HG4_Ill_manta_1663:HG4_Ill_scalpel_6491:HG4_PB_SVrefine2Falcon1Dovetail_4035:HG4_PB_SVrefine2PBcRDovetail_3339:HG4_PB_pbsv_6673;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0690691;ClusterMaxSizeDiff=0.0690691;ClusterMaxEditDist=0.0690691;PBcalls=7;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=-343;DistForward=-325;DistMin=-343;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:28190196-28190544;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:24:0|1:23:1:0:22:./.:0:0:0:0:0/1:26:21:0/1:22:7:.:.:.
chr6	28350686	HG2_Ill_Krunchall_9576	GGCTAATATTTATTTAAAATGCACCATACATGCAATATCCTGTATAAACGGCAGAGATAAGAACATCAGAAATGAAAAATAACAACA	G	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_4969:HG4_PB_pbsv_6676:HG2_PB_pbsv_6677:HG4_Ill_svaba_8727:HG4_Ill_scalpel_6493:HG4_Ill_manta_1664:HG4_Ill_Krunchall_9909:HG4_Ill_GATKHC_11260:HG4_Ill_GATKHCSBGrefine_4706:HG4_Ill_250bpfermikitraw_9428:HG4_Ill_150bpfermikitraw_9010:HG2_PB_assemblyticsfalcon_22766:HG2_Ill_svaba_8632:HG2_Ill_Krunchall_9576:HG2_Ill_GATKHC_11195:HG2_Ill_GATKHCSBGrefine_4648:HG2_Ill_250bpfermikitraw_9392:HG4_PB_SVrefine2PBcRDovetail_3342;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9392:HG2_Ill_GATKHCSBGrefine_4648:HG2_Ill_GATKHC_11195:HG2_Ill_Krunchall_9576:HG2_Ill_svaba_8632:HG2_PB_assemblyticsfalcon_22766:HG4_Ill_150bpfermikitraw_9010:HG4_Ill_250bpfermikitraw_9428:HG4_Ill_GATKHCSBGrefine_4706:HG4_Ill_GATKHC_11260:HG4_Ill_Krunchall_9909:HG4_Ill_manta_1664:HG4_Ill_scalpel_6493:HG4_Ill_svaba_8727;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0232558;ClusterMaxSizeDiff=0.0232558;ClusterMaxEditDist=0.0348837;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-86;DistBack=821;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=78;REFWIDENED=6:28350642-28350805;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:0|1:27:0:2:30:./.:0:0:0:0:0/1:27:22:./.:.:.:.:.:.
chr6	33475553	HG2_PB_SVrefine2Falcon2Bionano_3382	CGCCCAGTTAGTTTTTGTATTTTTAGGAGAGATGGGTTTTCGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCCCAGGTGATCTGCCTGCTTCGGCCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACTGGGCCCTGTCTAAAATATATTTCTTACTGTGGGTCCTAGTCAAAAAAGTTTGAAAGCAG	C	20	PASS	ClusterIDs=HG2_10X_allpass_1141:HG3_PB_pbsv_6591:HG2_PB_pbsv_6767:HG3_PB_HySA_10404:HG4_PB_pbsv_6780:HG3_Ill_MetaSV_4480:HG2_Ill_MetaSV_4299:HG4_PB_SVrefine2PBcRDovetail_3379:HG4_PB_SVrefine2Falcon1Dovetail_4078:HG4_Ill_SVrefine2DISCOVARDovetail_5011:HG4_Ill_250bpfermikitraw_9497:HG4_Ill_150bpfermikitraw_9087:HG3_PB_SVrefine2PBcRDovetail_3094:HG3_Ill_SVrefine2DISCOVARDovetail_5118:HG3_10X_allpass_1399:HG2_PB_SVrefine2PBcRplusDovetail_9432:HG2_PB_SVrefine2PB10Xhap12_4938:HG2_PB_SVrefine2Falcon2Bionano_3382:HG2_Ill_SVrefine2DISCOVARplusDovetail_11050:HG2_Ill_250bpfermikitraw_9460:HG2_Ill_150bpfermikitraw_8866;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_1141:HG4_PB_SVrefine2PBcRDovetail_3379:HG4_PB_SVrefine2Falcon1Dovetail_4078:HG4_Ill_SVrefine2DISCOVARDovetail_5011:HG4_Ill_250bpfermikitraw_9497:HG4_Ill_150bpfermikitraw_9087:HG3_PB_SVrefine2PBcRDovetail_3094:HG3_Ill_SVrefine2DISCOVARDovetail_5118:HG3_10X_allpass_1399:HG2_PB_SVrefine2PBcRplusDovetail_9432:HG2_PB_SVrefine2PB10Xhap12_4938:HG2_PB_SVrefine2Falcon2Bionano_3382:HG2_Ill_SVrefine2DISCOVARplusDovetail_11050:HG2_Ill_250bpfermikitraw_9460:HG2_Ill_150bpfermikitraw_8866;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0207254;ClusterMaxSizeDiff=0.0207254;ClusterMaxEditDist=0.0209424;PBcalls=10;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-192;DistBack=2;DistForward=4064;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=195;REFWIDENED=6:33475554-33475940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:1:29:1:19:./.:0:0:0:0:1/1:0:11:./.:.:.:.:.:.
chr6	33797394	HG2_Ill_GATKHCSBGrefine_4722	TCCCTCCCCTCCCTCACCTCCCTGGGTGCTGAAAGCAGCCCAGCCTCTTGTCCCCTCCCCTTCCCTCCCTCACCTCCCTGGGTGCTGAAAGCAGCCCAGTCTCTTGTC	T	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_4722:HG2_PB_assemblyticsPBcR_22087:HG3_PB_SVrefine2PBcRDovetail_3095:HG2_PB_SVrefine2PBcRplusDovetail_9435:HG2_PB_SVrefine2Falcon2Bionano_3385:HG2_PB_pbsv_6770:HG3_PB_HySA_10405:HG3_PB_pbsv_6592:HG3_Ill_250bpfermikitraw_9145:HG2_Ill_GATKHC_11299;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4722:HG3_PB_pbsv_6592:HG3_Ill_250bpfermikitraw_9145:HG2_Ill_GATKHC_11299;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0277778;ClusterMaxSizeDiff=0.0185185;ClusterMaxEditDist=0.11215;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-107;DistBack=-133;DistForward=-55;DistMin=-133;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=254;REFWIDENED=6:33797254-33797614;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3366.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:0|1:33:4:0:30:./.:0:0:0:0:0/1:9:8:./.:.:.:.:.:.
chr6	35104206	HG3_PB_HySA_10419	GACAAATAGCTAGTTTATAAAAAAAAGCAGGAAGTGAAACAGATGAAAAACTTTTCTCTTAAAAAGTAAAATCGTATTTATAGCAGCAAAGAAACAATAATTTGAAATTTGCAAAAATAAACATTCATCTAAGTATTAAGGTTCCACGTTCCTTTTCCTGTCTCTGATGCTATACATGATGAAAGCTAAACTCTCCCTACAGATAATACTCAGATGTTACTGAATAGTGCCAAAGTCATTTGGTCTTCTAAAGCGGTAGTTCTCAGATTTTAGGAATTCACAGACTAATAAAATTTCTGAAAATATTTTAAGCAACTGAAAACAACTTGCCAACTTTTTGTTTTGCCTAGTATGGACAGTGAAACAAGCAAATAAAAATCATCTACCACCACCAAAATCATCATTTCATCAAAGAAAAGATAGCTTAACCTCTGAAAAAAACCAGAAAGGAAATATTGTCAAAATAAACAGCAGTCCCTTAAATGGAATTAACTTTAGGAAAACTCATTACAATATCTTTATGATTTCATTTCACTAAATAGTGCTAAGAATTTTGTCACAGACCAGCATGGGTATTTGGCAACCACTGTTCTAAGTTTTTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4862:HG4_PB_HySA_10006:HG2_PB_pbsv_6778:HG4_PB_pbsv_6789:HG3_PB_pbsv_6597:HG2_PB_HySA_12501:HG4_PB_SVrefine2PBcRDovetail_3385:HG4_PB_SVrefine2Falcon1Dovetail_4084:HG4_Ill_SVrefine2DISCOVARDovetail_5025:HG3_PB_SVrefine2PBcRDovetail_3098:HG3_PB_HySA_10419:HG3_Ill_SVrefine2DISCOVARDovetail_5123:HG2_PB_SVrefine2PBcRplusDovetail_9440:HG2_PB_SVrefine2PB10Xhap12_4947:HG2_PB_SVrefine2Falcon2Bionano_3391:HG2_Ill_SVrefine2DISCOVARplusDovetail_11062;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4862:HG4_PB_SVrefine2PBcRDovetail_3385:HG4_PB_SVrefine2Falcon1Dovetail_4084:HG4_Ill_SVrefine2DISCOVARDovetail_5025:HG3_PB_SVrefine2PBcRDovetail_3098:HG3_PB_HySA_10419:HG3_Ill_SVrefine2DISCOVARDovetail_5123:HG2_PB_SVrefine2PBcRplusDovetail_9440:HG2_PB_SVrefine2PB10Xhap12_4947:HG2_PB_SVrefine2Falcon2Bionano_3391:HG2_Ill_SVrefine2DISCOVARplusDovetail_11062;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00498753;ClusterMaxSizeDiff=0.00498753;ClusterMaxEditDist=0.00666667;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-601;DistBack=23166;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=601;REFWIDENED=6:35104207-35105408;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:0:22:1:25:./.:0:0:0:0:1/1:0:9:0/1:2:9:.:.:.
chr6	35626432	HG2_10X_SVrefine210Xhap12_4864	TGGTACATGACATTGGTTTTCAAATGTTAAACCAACCTTGGATACCTGGAATAAACCCTATTTGGTCACTGTATTTTATCATTTTTATATGTTGTTGGATTCAATTTACTAAAATTTTGTTAAAAAATATTGCTGGCTGGGTGTGGTGGCTTACACTTGTAATCCCAGCATTTTGGGAGGCTAAGGCGGGTGGATTGCTTGAGCCCAGGAGTTCGAGACCAATCTGGGCAACATGGCAAAACCCCATCTCTACCAAAAAATACAAAAATTAGCTGAGCATGGTGGCACACACCTGTAGTCCCAGCTACTCAGAGGCTGAGGTGGGAAGACGGCTTGAGCCCAGGAGGTGGAGGTTGCAGTGAGCCATGATCACACCATCACACAACCACACTCCAGCCTGGGCAACAGGGCGAGACCCTGGTTCAGGAAGAAATAAGTAAATAAATAATAAAAATCATAGAGTGACTTAAGAAATATTCCATCTTTATCAATTTTATGGAGGAGTTTGTGTAAAATTGGTATTATGACTTCCTAAAATGTTTGGTAGAATCAGGAATACCATGTAGGCCTAGAGTTTTCTTTGTGGGAATTCAATTTTTTTTTTTTTTTCGAGACTGAGTTTCGCTCCTGTTGCCTAGGCTGGAGTGCTGTGGCACCATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGTCTCAGCCTCTGGAGTAGCTGAGATTACAGGCATGCGCCACCACACTCAGTTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCCGGTCTCAAAGTCCCGACCTCAGGTGATCCGCCTACCTCAGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCAAGCCTGGCCGAATTCAATTTCTTTAATAGATATAGGACTTTTCAGGTTGTTTCTTCTTCAGTGAGCTTAGGTATTTTGTATCTTTCAAGGAATTTGCACATTTCATCTAGCTGTCTAATGTATTACTATAAAGTAATTCATATTATTCTCTCATCCTTTTAATAATTATAGAATCTGAGCTTTGTTAGCAATTCTTTCATTCTTGATATTGGTAAGTTGTCTTCTCTCTCTGATTCCTGATTAGTCAGGTTAGAGTTTTATCAATTTCATTGTTCTCAAAGAACCAGCTTTTGATTTCACTGACTTTCTCTACTAGTTTTCTTTTTTTCTATTCCACTAATTTTGGCTTTTATCCTTAACTCTTTTCCTCTGTTTACTTTGGGTTTAATTTTCCCTTCTTTTTCTAATTTCTTAAGGTGAAAGCTGAGGACACTGATTTGTGATTTTACTTCTTACCCAATATAGACATTTAGTGCTATGAATTTTCCCCTAAACATTTGCATTAACCACAACCCACATATTCTGATATGATTTTCATTAAGTACAAAATACTTTCTAAATTCATCTTTGATATTCTTCTTTGACCTGTGGGCTTCTTAGGAATACATTAGTTTCTAAATATTTAATAATTTTCCAAGTATCTTTCTGTTATTGACTTTTAATTTAACTCCCTTTTGGTCAGCATACATACTTTATGATCTAAGTCACTTTAAATGCATTGATGCTATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGACGCAATCTCAGCTCACCGCAACCCGTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCATGCACCACCACGCCCGGCTGATTTTGTATTTTTAGTAGAGACAGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCGAGCTCAGGTGATCCTCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACCGCGCCTGGCCAACACTGACACTATTTTATGAACAAAAATATGATCTATCTTATTAAATGTCCTGTGCTGTGTGCAACTGAAAAGAATGTGTATTCTGCTTGTATTGGGTAGAATACTATGTAAATGTCAATTAGGTTAGTTGACAATGTAGTTCACATCTTCTAAATTATTTTTTGTCTACTTGTTCTATCAATTATTGAGAGACAGGTGAGGTATTGAAATCTCCAACTATAATTTTAGATCTACTTATCCTTTCAAGTTCTATCAGTTTCTGATTCATGTATCTTGAAGCTCTGTTATTAGGTGCATATTTAGGACTATTAATTTCACTTGAAGGCAGCCAATCATGAAAGGCCATACATTATATGATCCCATTTATACGAAAGGTTCAGAATAGGCAAATTCATAGAGACAGAAAGGAGACTGGTGGTTGCTTAGGGTTAGGGGAAACAGGAGGAAATGGGGAGTGGGAGATTTCTTTTTAGGGTTATAAATGTTCCAAAGTGGGACAGCAGTAATAGTTGCACAAATCTGGAAATATGCTGGAAACCACTGAATTATATACTTTATTTTATTTTTGATTTACCTTATTTTATGTATTTATTTATTTATAGAGATATGGGGTCTCGCTACATTGAGCAGGCTGGTCTTGAACTCCTGGTCTCAAGTGATCCTCTCATCTCAGCCTCCCAATGTACTGGGATTACAGGCATGAGCCACCACACCCGGCCTGAATTGTACACTTTAAAGGGGAGAATATTATGGTATGTGAATTTTATCTCAATTAAGCTGCTAAAAAATTATTCTACTCAATGGATGACCATAATTCATGAATGATATACATTCCTTCCAACTTATTAATACTATATAACACTGCTATGAACATTTTTGTGCCTAAGCTTTTATCATATGTAATTGAAAGTATGGCTTCTTGGCTGGGCGCGGTGACTCGTGCCTGATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCACCTGTGGTCACGAGTTCAAGACTAGCCTGGTCAACATGGTGAAACCCCGTCTCCACTAAAAATACAAAAATTAGCCGGGTGTGGTGGCAAGTGCCTGTAATCCCAGCTACTCAGGAGGCTAAGGCAGGAGAATCACTTGAACCCAGAAGGCAGTTGCAGTGAGCAGAGATCGAGCCACTGCACACTACAGCCTGGGTGACAAGAGCAAAACTCCGTCTCAAAAAAAAAAAAAAAAAGAGTATGGCTTCTTGAACACAGTCTGCTTGAGTGAGAATCTTAGCTTGACAACATAGCAACTGTATGATCTTGTGCAAGTCACTTACCTTCTTTGTGCCACAGTTTCCCTATCTAAAACACAAGGTTATCAGTTATCAACATCTCTTGGGATTGTGAGGACTAAAGTAATGCACATAAAG	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3387:HG3_10X_allpass_1401:HG4_10X_allpass_1345:HG2_10X_allpass_1144:HG2_Ill_tnscope_796:HG4_PB_pbsv_6792:HG4_PB_assemblyticsfalcon_22297:HG4_PB_SVrefine2Falcon1Dovetail_4087:HG4_Ill_MetaSV_4477:HG3_PB_pbsv_6599:HG3_PB_SVrefine2PBcRDovetail_3100:HG3_Ill_SVrefine2DISCOVARDovetail_5124:HG3_Ill_MetaSV_4482:HG2_PB_pbsv_6780:HG2_PB_SVrefine2PB10Xhap12_4949:HG2_PB_SVrefine2Falcon2Bionano_3393:HG2_Ill_breakscan11_993:HG2_Ill_SpiralSDKrefine_14544:HG2_Ill_MetaSV_4305:HG2_10X_SVrefine210Xhap12_4864:HG3_PB_assemblyticsfalcon_22769:HG3_Ill_Krunchall_9498:HG2_Ill_Krunchall_9735;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4864:HG2_Ill_MetaSV_4305:HG2_Ill_SpiralSDKrefine_14544:HG2_Ill_breakscan11_993:HG2_PB_SVrefine2Falcon2Bionano_3393:HG2_PB_SVrefine2PB10Xhap12_4949:HG2_PB_pbsv_6780:HG3_Ill_MetaSV_4482:HG3_Ill_SVrefine2DISCOVARDovetail_5124:HG3_PB_SVrefine2PBcRDovetail_3100:HG3_PB_pbsv_6599:HG4_Ill_MetaSV_4477:HG4_PB_SVrefine2Falcon1Dovetail_4087:HG4_PB_assemblyticsfalcon_22297:HG4_PB_pbsv_6792;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00241692;ClusterMaxSizeDiff=0.00241692;ClusterMaxEditDist=0.00241692;PBcalls=10;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-3312;DistBack=112831;DistForward=-3312;DistMin=-3312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:35626433-35629746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3368.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:47:0|1:46:6:1:21:./.:0:0:0:0:0/1:49:10:0/1:280:134:3317:.:.
chr6	36070119	HG2_Ill_SpiralSDKrefine_14547	CGTTCACTTGAAATGCAACTGTGAGAGATAGCAGGAATAAAGAAGGTGATGATCATAACTAGGGAAGTTAGGATG	C	20	PASS	ClusterIDs=HG2_PB_pbsv_6783:HG3_Ill_svaba_8817:HG3_Ill_Krunchall_9504:HG3_Ill_GATKHC_11292:HG3_Ill_GATKHCSBGrefine_4673:HG3_Ill_Cortex_3154:HG3_Ill_250bpfermikitraw_9165:HG3_Ill_150bpfermikitraw_8939:HG3_10X_allpass_1404:HG2_PB_assemblyticsfalcon_22880:HG2_Ill_svaba_8743:HG2_Ill_scalpel_6720:HG2_Ill_manta_1935:HG2_Ill_SpiralSDKrefine_14547:HG2_Ill_Krunchall_9740:HG2_Ill_GATKHC_11320:HG2_Ill_GATKHCSBGrefine_4735:HG2_Ill_Cortex_7621:HG2_Ill_250bpfermikitraw_9483:HG2_Ill_150bpfermikitraw_8888:HG3_PB_pbsv_6603;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8888:HG2_Ill_250bpfermikitraw_9483:HG2_Ill_Cortex_7621:HG2_Ill_GATKHCSBGrefine_4735:HG2_Ill_GATKHC_11320:HG2_Ill_Krunchall_9740:HG2_Ill_SpiralSDKrefine_14547:HG2_Ill_manta_1935:HG2_Ill_scalpel_6720:HG2_Ill_svaba_8743:HG2_PB_assemblyticsfalcon_22880:HG3_10X_allpass_1404:HG3_Ill_150bpfermikitraw_8939:HG3_Ill_250bpfermikitraw_9165:HG3_Ill_Cortex_3154:HG3_Ill_GATKHCSBGrefine_4673:HG3_Ill_GATKHC_11292:HG3_Ill_Krunchall_9504:HG3_Ill_svaba_8817;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0134228;ClusterMaxSizeDiff=0.0134228;ClusterMaxEditDist=0.0134228;PBcalls=3;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-74;DistBack=10507;DistForward=3951;DistMin=3951;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:36070118-36070195;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:24:0|1:25:2:1:19:./.:0:0:0:0:0/1:33:36:./.:.:.:.:.:.
chr6	36664367	HG2_Ill_Krunchall_9744	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4869:HG2_PB_PB10Xdip_25588:HG2_PB_PB10Xdip_25589:HG2_PB_pbsv_6785:HG4_Ill_svaba_8837:HG4_Ill_scalpel_6575:HG4_Ill_manta_1691:HG4_Ill_Krunchall_10081:HG4_Ill_GATKHC_11383:HG4_Ill_GATKHCSBGrefine_4794:HG4_Ill_250bpfermikitraw_9518:HG4_Ill_150bpfermikitraw_9109:HG2_Ill_svaba_8746:HG2_Ill_manta_1936:HG2_Ill_SpiralSDKrefine_14551:HG2_Ill_Krunchall_9744:HG2_Ill_GATKHC_11322:HG2_Ill_GATKHCSBGrefine_4737:HG2_Ill_250bpfermikitraw_9487:HG2_Ill_150bpfermikitraw_8892:HG4_PB_HySA_10016:HG2_PB_assemblyticsfalcon_22884:HG4_PB_pbsv_6795:HG4_PB_SVrefine2PBcRDovetail_3391:HG4_Ill_SVrefine2DISCOVARDovetail_5030:HG2_PB_SVrefine2PB10Xhap12_4954:HG2_Ill_SVrefine2DISCOVARplusDovetail_11068;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8892:HG2_Ill_250bpfermikitraw_9487:HG2_Ill_GATKHCSBGrefine_4737:HG2_Ill_GATKHC_11322:HG2_Ill_Krunchall_9744:HG2_Ill_SpiralSDKrefine_14551:HG2_Ill_manta_1936:HG2_Ill_svaba_8746:HG2_PB_PB10Xdip_25588:HG4_Ill_svaba_8837:HG4_Ill_scalpel_6575:HG4_Ill_manta_1691:HG4_Ill_Krunchall_10081:HG4_Ill_GATKHC_11383:HG4_Ill_GATKHCSBGrefine_4794:HG4_Ill_250bpfermikitraw_9518:HG4_Ill_150bpfermikitraw_9109;NumExactMatchSVs=17;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.241379;PBcalls=8;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-58;DistBack=23135;DistForward=-29;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=143;REFWIDENED=6:36664333-36664533;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3370.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:21:2:7:24:./.:0:0:0:0:0/1:18:24:./.:.:.:.:.:.
chr6	38009501	HG2_Ill_GATKHCSBGrefine_4744	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_6795:HG2_PB_HySA_12525:HG4_Ill_GATKHCSBGrefine_4801:HG3_Ill_GATKHCSBGrefine_4679:HG3_Ill_150bpfermikitraw_8949:HG2_Ill_GATKHCSBGrefine_4744:HG2_Ill_manta_1940;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4744:HG3_Ill_150bpfermikitraw_8949:HG3_Ill_GATKHCSBGrefine_4679:HG4_Ill_GATKHCSBGrefine_4801;NumExactMatchSVs=4;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.129032;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-56;DistBack=-15;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:38009500-38009558;PctSeqSimilarity=0.8621;PctSizeSimilarity=0.7778;PctRecOverlap=0.7808;SizeDiff=-16;StartDistance=8;EndDistance=-8;GTMatch=0;TruScore=80;MatchId=3371.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:49:./.:22:22:2:16:./.:0:0:0:0:./.:1:4:./.:.:.:.:.:.
chr6	38922187	HG4_Ill_scalpel_6591	TAATAAATTACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_10039:HG4_Ill_Krunchall_10104:HG3_Ill_Krunchall_9527:HG2_PB_pbsv_6798:HG2_Ill_Krunchall_9762:HG4_PB_pbsv_6806:HG3_PB_pbsv_6616:HG2_PB_HySA_12531:HG4_Ill_MetaSV_4483:HG3_PB_HySA_10447:HG3_Ill_MetaSV_4488:HG2_Ill_tnscope_798:HG2_Ill_MetaSV_4311:HG4_PB_SVrefine2PBcRDovetail_3397:HG4_PB_SVrefine2Falcon1Dovetail_4097:HG4_Ill_scalpel_6591:HG4_Ill_manta_1696:HG4_Ill_SVrefine2DISCOVARDovetail_5042:HG4_Ill_GATKHCSBGrefine_4807:HG4_10X_allpass_1346:HG3_PB_SVrefine2PBcRDovetail_3110:HG3_Ill_scalpel_6823:HG3_Ill_SVrefine2DISCOVARDovetail_5137:HG3_Ill_GATKHCSBGrefine_4681:HG2_PB_SVrefine2PBcRplusDovetail_9451:HG2_PB_SVrefine2PB10Xhap12_4960:HG2_PB_SVrefine2Falcon2Bionano_3401:HG2_PB_SVrefine2Falcon1plusDovetail_10164:HG2_Ill_scalpel_6736:HG2_Ill_manta_1942:HG2_Ill_SVrefine2DISCOVARplusDovetail_11082:HG2_Ill_GATKHCSBGrefine_4748:HG2_10X_allpass_1145:HG2_10X_SVrefine210Xhap12_4877:HG2_Ill_breakscan11_994;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4877:HG2_10X_allpass_1145:HG2_Ill_GATKHCSBGrefine_4748:HG2_Ill_SVrefine2DISCOVARplusDovetail_11082:HG2_Ill_manta_1942:HG2_Ill_scalpel_6736:HG2_PB_SVrefine2Falcon1plusDovetail_10164:HG2_PB_SVrefine2Falcon2Bionano_3401:HG2_PB_SVrefine2PB10Xhap12_4960:HG2_PB_SVrefine2PBcRplusDovetail_9451:HG3_Ill_GATKHCSBGrefine_4681:HG3_Ill_SVrefine2DISCOVARDovetail_5137:HG3_Ill_scalpel_6823:HG3_PB_SVrefine2PBcRDovetail_3110:HG4_10X_allpass_1346:HG4_Ill_GATKHCSBGrefine_4807:HG4_Ill_SVrefine2DISCOVARDovetail_5042:HG4_Ill_manta_1696:HG4_Ill_scalpel_6591:HG4_PB_SVrefine2Falcon1Dovetail_4097:HG4_PB_SVrefine2PBcRDovetail_3397;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00632911;ClusterMaxSizeDiff=0.00632911;ClusterMaxEditDist=0.0126783;PBcalls=13;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=32337;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:38922188-38922514;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3372.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:84:1/1:1:35:1:39:./.:0:0:0:0:1/1:0:43:./.:2:18:.:.:.
chr6	40081671	HG3_Ill_150bpfermikitraw_8970	ACAAGTTGTGGTAGGGGATGCAAGTTGTGGTAGGGGATGCAAGTTGTGGTAGGGGATG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11089:HG2_PB_pbsv_6806:HG3_PB_pbsv_6623:HG4_PB_pbsv_6813:HG3_PB_HySA_10454:HG4_Ill_svaba_8863:HG4_Ill_GATKHCSBGrefine_4811:HG4_Ill_250bpfermikitraw_9542:HG3_Ill_svaba_8849:HG3_Ill_GATKHC_11328:HG3_Ill_GATKHCSBGrefine_4685:HG3_Ill_250bpfermikitraw_9198:HG3_Ill_150bpfermikitraw_8970:HG2_Ill_svaba_8775:HG2_Ill_SpiralSDKrefine_14572:HG2_Ill_GATKHCSBGrefine_4753:HG2_Ill_250bpfermikitraw_9512:HG3_PB_SVrefine2PBcRDovetail_3116:HG3_Ill_SVrefine2DISCOVARDovetail_5141;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9512:HG2_Ill_GATKHCSBGrefine_4753:HG2_Ill_SpiralSDKrefine_14572:HG2_Ill_svaba_8775:HG3_Ill_150bpfermikitraw_8970:HG3_Ill_250bpfermikitraw_9198:HG3_Ill_GATKHCSBGrefine_4685:HG3_Ill_GATKHC_11328:HG3_Ill_svaba_8849:HG4_Ill_250bpfermikitraw_9542:HG4_Ill_GATKHCSBGrefine_4811:HG4_Ill_svaba_8863;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0521739;PBcalls=5;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=9;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-57;DistBack=-58;DistForward=46;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=102;REFWIDENED=6:40081653-40081811;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3373.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:32:0|1:38:1:3:28:./.:0:0:0:0:0/1:23:18:./.:.:.:.:.:.
chr6	41404060	HG2_Ill_MetaSV_4314	ATATGCTTGAAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG3_Ill_Krunchall_9545:HG3_Ill_Krunchall_9546:HG2_Ill_Krunchall_9778:HG2_PB_pbsv_6816:HG4_PB_assemblyticsfalcon_22351:HG3_PB_assemblyticsfalcon_22819:HG2_PB_assemblyticsfalcon_22932:HG2_PB_assemblyticsPBcR_22157:HG3_PB_HySA_10469:HG3_PB_pbsv_6636:HG2_Ill_tnscope_799:HG4_PB_SVrefine2Falcon1Dovetail_4112:HG3_PB_SVrefine2PBcRDovetail_3124:HG3_Ill_scalpel_6835:HG3_Ill_manta_1610:HG3_Ill_SVrefine2DISCOVARDovetail_5150:HG3_Ill_GATKHCSBGrefine_4697:HG3_10X_allpass_1407:HG2_PB_SVrefine2PBcRplusDovetail_9461:HG2_PB_SVrefine2PB10Xhap12_4972:HG2_PB_SVrefine2Falcon2Bionano_3412:HG2_PB_SVrefine2Falcon1plusDovetail_10175:HG2_Ill_scalpel_6748:HG2_Ill_manta_1947:HG2_Ill_MetaSV_4314:HG2_Ill_GATKHCSBGrefine_4757:HG2_10X_allpass_1146:HG2_10X_SVrefine210Xhap12_4893:HG2_Ill_breakscan11_997;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4893:HG2_10X_allpass_1146:HG2_Ill_GATKHCSBGrefine_4757:HG2_Ill_MetaSV_4314:HG2_Ill_manta_1947:HG2_Ill_scalpel_6748:HG2_PB_SVrefine2Falcon1plusDovetail_10175:HG2_PB_SVrefine2Falcon2Bionano_3412:HG2_PB_SVrefine2PB10Xhap12_4972:HG2_PB_SVrefine2PBcRplusDovetail_9461:HG3_10X_allpass_1407:HG3_Ill_GATKHCSBGrefine_4697:HG3_Ill_SVrefine2DISCOVARDovetail_5150:HG3_Ill_manta_1610:HG3_Ill_scalpel_6835:HG3_PB_SVrefine2PBcRDovetail_3124:HG4_PB_SVrefine2Falcon1Dovetail_4112;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0979463;ClusterMaxSizeDiff=0.0979463;ClusterMaxEditDist=0.196513;PBcalls=13;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-370;DistForward=-308;DistMin=-370;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:41404061-41404399;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3374.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:41:0|1:22:2:3:30:./.:0:0:0:0:0/1:26:15:0/1:32:13:.:.:.
chr6	41953350	HG3_Ill_scalpel_6839	GCCAGTTTAAGTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGGTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4894:HG3_PB_HySA_10472:HG3_PB_pbsv_6638:HG4_Ill_MetaSV_4489:HG2_Ill_MetaSV_4315:HG4_PB_pbsv_6825:HG4_Ill_scalpel_6604:HG4_Ill_manta_1700:HG4_Ill_GATKHCSBGrefine_4817:HG4_10X_allpass_1349:HG3_Ill_scalpel_6839:HG3_Ill_manta_1611:HG3_Ill_GATKHCSBGrefine_4698:HG3_10X_allpass_1408:HG2_Ill_scalpel_6751:HG2_Ill_manta_1948:HG2_Ill_GATKHCSBGrefine_4758:HG2_PB_pbsv_6817:HG4_PB_HySA_10065:HG2_Ill_tnscope_800:HG4_PB_SVrefine2PBcRDovetail_3407:HG4_PB_SVrefine2Falcon1Dovetail_4113:HG4_Ill_SVrefine2DISCOVARDovetail_5056:HG3_PB_SVrefine2PBcRDovetail_3126:HG2_PB_SVrefine2PBcRplusDovetail_9462:HG2_PB_SVrefine2PB10Xhap12_4973:HG2_PB_SVrefine2Falcon2Bionano_3413:HG2_PB_SVrefine2Falcon1plusDovetail_10176:HG2_Ill_SVrefine2DISCOVARplusDovetail_11096;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4758:HG2_Ill_manta_1948:HG2_Ill_scalpel_6751:HG3_10X_allpass_1408:HG3_Ill_GATKHCSBGrefine_4698:HG3_Ill_manta_1611:HG3_Ill_scalpel_6839:HG4_10X_allpass_1349:HG4_Ill_GATKHCSBGrefine_4817:HG4_Ill_manta_1700:HG4_Ill_scalpel_6604:HG4_PB_pbsv_6825;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0188679;ClusterMaxSizeDiff=0.0188679;ClusterMaxEditDist=0.157233;PBcalls=12;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=-417;DistForward=-315;DistMin=-417;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=320;REFWIDENED=6:41953046-41953680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:45:1/1:1:19:1:14:./.:0:0:0:0:1/1:0:37:./.:1:11:.:.:.
chr6	42230172	HG3_Ill_250bpfermikitraw_9219	CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_22164:HG4_PB_pbsv_6826:HG3_PB_assemblyticsfalcon_22824:HG4_PB_SVrefine2Falcon1Dovetail_4114:HG4_PB_assemblyticsfalcon_22356:HG4_Ill_SVrefine2DISCOVARDovetail_5057:HG3_Ill_SVrefine2DISCOVARDovetail_5152:HG3_PB_pbsv_6639:HG3_Ill_GATKHCSBGrefine_4699:HG3_Ill_250bpfermikitraw_9219:HG4_Ill_GATKHCSBGrefine_4818:HG4_Ill_250bpfermikitraw_9564:HG4_PB_HySA_10069:HG2_PB_HySA_12570:HG2_PB_pbsv_6818:HG2_PB_assemblyticsfalcon_22937;NumClusterSVs=16;ExactMatchIDs=HG3_Ill_250bpfermikitraw_9219:HG3_Ill_GATKHCSBGrefine_4699;NumExactMatchSVs=2;ClusterMaxShiftDist=0.344828;ClusterMaxSizeDiff=0.344828;ClusterMaxEditDist=0.344828;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-101;DistBack=-34;DistForward=19;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=73;REFWIDENED=6:42230206-42230346;PctSeqSimilarity=0.8973;PctSizeSimilarity=0.8119;PctRecOverlap=0.8137;SizeDiff=19;StartDistance=0;EndDistance=19;GTMatch=0;TruScore=84;MatchId=3376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:41:0|1:20:4:7:36:./.:0:0:0:0:0/1:11:4:./.:.:.:.:.:.
chr6	43385978	HG4_Ill_GATKHCSBGrefine_4820	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_9793:HG3_PB_assemblyticsfalcon_22835:HG4_PB_HySA_10073:HG4_PB_SVrefine2Falcon1Dovetail_4116:HG3_PB_SVrefine2PBcRDovetail_3129:HG4_PB_assemblyticsfalcon_22364:HG4_Ill_GATKHC_11452:HG4_Ill_GATKHCSBGrefine_4820:HG4_10X_allpass_1351:HG3_Ill_GATKHC_11360:HG3_Ill_GATKHCSBGrefine_4703:HG3_10X_allpass_1409:HG2_Ill_GATKHCSBGrefine_4762:HG2_10X_allpass_1147:HG2_Ill_SpiralSDKrefine_14589:HG4_Ill_Spiral_566:HG3_Ill_Spiral_7486:HG2_PB_assemblyticsfalcon_22947:HG2_PB_SVrefine2Falcon1plusDovetail_10179:HG2_Ill_Spiral_489:HG4_PB_SVrefine2PBcRDovetail_3410:HG4_Ill_SVrefine2DISCOVARDovetail_5062:HG2_PB_SVrefine2PBcRplusDovetail_9464:HG2_PB_SVrefine2PB10Xhap12_4975:HG2_PB_SVrefine2Falcon2Bionano_3415:HG2_Ill_SVrefine2DISCOVARplusDovetail_11104:HG2_10X_SVrefine210Xhap12_4899:HG2_PB_assemblyticsPBcR_22174:HG4_Ill_manta_1703:HG2_PB_PB10Xdip_25655:HG2_PB_PB10Xdip_25654:HG2_Ill_manta_1950:HG4_Ill_svaba_8895:HG4_Ill_250bpfermikitraw_9574:HG4_Ill_150bpfermikitraw_9169:HG3_Ill_svaba_8875:HG2_Ill_svaba_8801:HG2_Ill_250bpfermikitraw_9537:HG2_Ill_150bpfermikitraw_8947:HG2_PB_HySA_12582:HG2_PB_pbsv_6823:HG4_PB_pbsv_6830:HG3_PB_pbsv_6646:HG4_Ill_Krunchall_10141:HG4_Ill_MetaSV_4493:HG3_PB_HySA_10484;NumClusterSVs=46;ExactMatchIDs=HG2_10X_allpass_1147:HG2_Ill_GATKHCSBGrefine_4762:HG3_10X_allpass_1409:HG3_Ill_GATKHCSBGrefine_4703:HG3_Ill_GATKHC_11360:HG4_10X_allpass_1351:HG4_Ill_GATKHCSBGrefine_4820:HG4_Ill_GATKHC_11452;NumExactMatchSVs=8;ClusterMaxShiftDist=0.331984;ClusterMaxSizeDiff=0.331984;ClusterMaxEditDist=0.331984;PBcalls=19;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=9;HG4count=16;NumTechs=3;NumTechsExact=2;SVLEN=-112;DistBack=66053;DistForward=-83;DistMin=-83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=28;REFWIDENED=6:43385957-43386096;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3377.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:66:./.:0:0:0:0:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr6	44495315	HG4_Ill_GATKHCSBGrefine_4825	GAGAGGCAGAGGCCGTGGCAGGGTGGGAGAGGGTCCAGGGGTGTCACAGTGAGT	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_8957:HG4_PB_HySA_10104:HG2_PB_assemblyticsPBcR_22192:HG4_PB_pbsv_6843:HG2_PB_pbsv_6837:HG4_Ill_svaba_8908:HG4_Ill_GATKHC_11471:HG4_Ill_GATKHCSBGrefine_4825:HG4_Ill_250bpfermikitraw_9586:HG2_PB_assemblyticsfalcon_22966:HG2_Ill_Krunchall_9805:HG2_Ill_GATKHC_11399:HG2_Ill_GATKHCSBGrefine_4766:HG2_Ill_250bpfermikitraw_9547;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8957:HG4_Ill_svaba_8908:HG4_Ill_GATKHC_11471:HG4_Ill_GATKHCSBGrefine_4825:HG4_Ill_250bpfermikitraw_9586:HG2_PB_assemblyticsfalcon_22966:HG2_Ill_Krunchall_9805:HG2_Ill_GATKHC_11399:HG2_Ill_GATKHCSBGrefine_4766:HG2_Ill_250bpfermikitraw_9547;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0188679;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0943396;PBcalls=5;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-53;DistBack=53310;DistForward=28274;DistMin=28274;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=153;REFWIDENED=6:44495248-44495453;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3378.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:34:0|1:30:3:8:25:./.:0:0:0:0:0/1:21:20:./.:.:.:.:.:.
chr6	45967458	HG2_Ill_SpiralSDKrefine_14609	TCTTCCTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCAGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4913:HG2_10X_allpass_1148:HG3_PB_assemblyticsfalcon_22866:HG2_PB_assemblyticsfalcon_22979:HG4_PB_assemblyticsfalcon_22397:HG2_PB_assemblyticsPBcR_22207:HG3_Ill_Krunchall_9595:HG2_Ill_Krunchall_9819:HG3_PB_pbsv_6659:HG2_PB_pbsv_6842:HG3_Ill_MetaSV_4500:HG2_Ill_tnscope_801:HG4_PB_SVrefine2Falcon1Dovetail_4133:HG3_PB_SVrefine2PBcRDovetail_3141:HG3_Ill_scalpel_6865:HG3_Ill_manta_1616:HG3_Ill_SVrefine2DISCOVARDovetail_5177:HG3_Ill_GATKHCSBGrefine_4714:HG3_10X_allpass_1410:HG2_PB_SVrefine2PBcRplusDovetail_9478:HG2_PB_SVrefine2PB10Xhap12_4988:HG2_PB_SVrefine2Falcon2Bionano_3429:HG2_PB_SVrefine2Falcon1plusDovetail_10191:HG2_PB_HySA_12628:HG2_Ill_scalpel_6774:HG2_Ill_SpiralSDKrefine_14609:HG2_Ill_MetaSV_4321:HG2_Ill_GATKHCSBGrefine_4770;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4913:HG4_PB_SVrefine2Falcon1Dovetail_4133:HG3_PB_SVrefine2PBcRDovetail_3141:HG3_Ill_scalpel_6865:HG3_Ill_manta_1616:HG3_Ill_SVrefine2DISCOVARDovetail_5177:HG3_Ill_GATKHCSBGrefine_4714:HG3_10X_allpass_1410:HG2_PB_SVrefine2PBcRplusDovetail_9478:HG2_PB_SVrefine2PB10Xhap12_4988:HG2_PB_SVrefine2Falcon2Bionano_3429:HG2_PB_SVrefine2Falcon1plusDovetail_10191:HG2_PB_HySA_12628:HG2_Ill_scalpel_6774:HG2_Ill_SpiralSDKrefine_14609:HG2_Ill_MetaSV_4321:HG2_Ill_GATKHCSBGrefine_4770;NumExactMatchSVs=17;ClusterMaxShiftDist=0.103125;ClusterMaxSizeDiff=0.103125;ClusterMaxEditDist=0.103125;PBcalls=13;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=19769;DistForward=-315;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=6:45967459-45967802;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3379.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:37:0|1:22:1:0:32:./.:0:0:0:0:0/1:31:19:0/1:26:5:.:.:.
chr6	45983830	HG2_Ill_250bpfermikitraw_9561	GAAGGGGAAGGGGAAGAGGAAGGGGAAAGGGGAAGGGGAAGAGGAAGGGGA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_6848:HG2_PB_pbsv_6843:HG4_Ill_svaba_8921:HG4_Ill_SVrefine2DISCOVARDovetail_5073:HG4_Ill_150bpfermikitraw_9194:HG2_PB_SVrefine2PBcRplusDovetail_9479:HG2_PB_SVrefine2PB10Xhap12_4989:HG2_Ill_svaba_8824:HG2_Ill_SVrefine2DISCOVARplusDovetail_11112:HG2_Ill_GATKHCSBGrefine_4772:HG2_Ill_250bpfermikitraw_9561:HG2_Ill_150bpfermikitraw_8970;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8970:HG2_Ill_250bpfermikitraw_9561:HG2_Ill_GATKHCSBGrefine_4772:HG2_Ill_SVrefine2DISCOVARplusDovetail_11112:HG2_Ill_svaba_8824:HG2_PB_SVrefine2PB10Xhap12_4989:HG2_PB_SVrefine2PBcRplusDovetail_9479:HG4_Ill_150bpfermikitraw_9194:HG4_Ill_SVrefine2DISCOVARDovetail_5073:HG4_Ill_svaba_8921;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0754717;PBcalls=4;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=9951;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=90;REFWIDENED=6:45983831-45983970;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3380.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:29:./.:14:6:7:21:./.:0:0:0:0:./.:0:7:./.:.:.:.:.:.
chr6	46909149	HG2_Ill_150bpfermikitraw_8985	AAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4914:HG4_Ill_svaba_8929:HG4_Ill_Krunchall_10173:HG4_Ill_GATKHC_11499:HG4_Ill_GATKHCSBGrefine_4828:HG4_Ill_250bpfermikitraw_9606:HG4_Ill_150bpfermikitraw_9205:HG2_Ill_svaba_8836:HG2_Ill_manta_1956:HG2_Ill_Krunchall_9835:HG2_Ill_GATKHC_11434:HG2_Ill_GATKHCSBGrefine_4774:HG2_Ill_250bpfermikitraw_9573:HG2_Ill_150bpfermikitraw_8985:HG2_PB_pbsv_6845:HG4_Ill_SVrefine2DISCOVARDovetail_5075;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_8985:HG2_Ill_250bpfermikitraw_9573:HG2_Ill_GATKHCSBGrefine_4774:HG2_Ill_GATKHC_11434:HG2_Ill_Krunchall_9835:HG2_Ill_manta_1956:HG2_Ill_svaba_8836:HG4_Ill_150bpfermikitraw_9205:HG4_Ill_250bpfermikitraw_9606:HG4_Ill_GATKHCSBGrefine_4828:HG4_Ill_GATKHC_11499:HG4_Ill_Krunchall_10173:HG4_Ill_svaba_8929;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0530973;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.0707965;PBcalls=1;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-54;DistBack=68284;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=68;REFWIDENED=6:46909113-46909234;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:43:./.:12:22:16:7:./.:0:0:0:0:0/1:19:13:./.:.:.:.:.:.
chr6	47091578	HG2_PB_SVrefine2PB10Xhap12_4990	GTTATAACAGTACTTCGTATATTTTGGGTAACAGTCTTTTATCAGATATGTCTTTTGCAAATTTTCTCCCAGTCTATGGCTTGTCTTCTCATTCTCTTGACACTGTCTTTTGCAGAGCAATTTTTATTTTTAATGAAGTCCAGCTTATCAATTGTTTTTTTCAAGTATTATGCCTTTGGTTGTATCTAAAAAGTAATTACCAAACCCAAGGTCACCTAGATTTTTTTTTAGTTATCTTCTAGGAATTTCATAGTTTTGCATTTTATACTTAGGTCTACTTTTTCTCCATTGTATTAATTTTGCTCCCTTGTTAAAGACCATTCATTTAAACAAAGCCATTCATTTAAACTTCAA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11114:HG4_PB_assemblyticsfalcon_22405:HG3_PB_assemblyticsfalcon_22877:HG2_PB_assemblyticsfalcon_22992:HG2_PB_pbsv_6846:HG3_PB_pbsv_6660:HG2_PB_SVrefine2Falcon1plusDovetail_10193:HG2_10X_allpass_1149:HG4_PB_SVrefine2Falcon1Dovetail_4135:HG4_Ill_SVrefine2DISCOVARDovetail_5076:HG3_PB_SVrefine2Falcon1Dovetail_4161:HG4_Ill_MetaSV_4499:HG4_10X_allpass_1353:HG3_10X_allpass_1411:HG4_PB_pbsv_6851:HG3_PB_SVrefine2PBcRDovetail_3142:HG2_PB_SVrefine2PB10Xhap12_4990:HG2_PB_SVrefine2Falcon2Bionano_3432;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11114:HG2_PB_SVrefine2PB10Xhap12_4990:HG2_PB_SVrefine2Falcon2Bionano_3432;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0282486;ClusterMaxSizeDiff=0.0282486;ClusterMaxEditDist=0.039548;PBcalls=12;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-353;DistBack=-535;DistForward=-48;DistMin=-535;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=319;REFWIDENED=6:47091579-47092250;PctSeqSimilarity=0.9752;PctSizeSimilarity=0.9916;PctRecOverlap=0.5462;SizeDiff=-3;StartDistance=-159;EndDistance=-162;GTMatch=0;TruScore=83;MatchId=3382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:22:0|1:27:0:0:17:./.:0:0:0:0:0/0:81:0:./.:25:3:.:.:.
chr6	47280141	HG3_Ill_manta_1620	GAAGAAATCACCAGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4915:HG4_PB_pbsv_6852:HG4_PB_SVrefine2Falcon1Dovetail_4136:HG4_Ill_svaba_8930:HG4_Ill_scalpel_6632:HG4_Ill_manta_1705:HG4_Ill_SVrefine2DISCOVARDovetail_5077:HG4_Ill_Krunchall_10177:HG4_Ill_GATKHC_11504:HG4_Ill_GATKHCSBGrefine_4830:HG4_Ill_250bpfermikitraw_9609:HG4_Ill_150bpfermikitraw_9210:HG4_CG_vcfBeta_4532:HG4_10X_allpass_1354:HG3_PB_pbsv_6661:HG3_PB_assemblyticsfalcon_22878:HG3_PB_SVrefine2PBcRDovetail_3143:HG3_Ill_svaba_8915:HG3_Ill_scalpel_6874:HG3_Ill_manta_1620:HG3_Ill_SVrefine2DISCOVARDovetail_5182:HG3_Ill_Krunchall_9609:HG3_Ill_GATKHC_11409:HG3_Ill_GATKHCSBGrefine_4716:HG3_Ill_250bpfermikitraw_9268:HG3_Ill_150bpfermikitraw_9042:HG3_CG_vcfBeta_3877:HG3_10X_allpass_1412:HG2_PB_pbsv_6847:HG2_PB_SVrefine2PBcRplusDovetail_9480:HG2_PB_SVrefine2PB10Xhap12_4991:HG2_Ill_svaba_8837:HG2_Ill_scalpel_6785:HG2_Ill_manta_1957:HG2_Ill_breakscan11_998:HG2_Ill_SpiralSDKrefine_14624:HG2_Ill_SVrefine2DISCOVARplusDovetail_11115:HG2_Ill_Krunchall_9838:HG2_Ill_GATKHC_11437:HG2_Ill_GATKHCSBGrefine_4775:HG2_Ill_250bpfermikitraw_9576:HG2_Ill_150bpfermikitraw_8988:HG2_CG_vcfBeta_4055:HG2_10X_allpass_1150;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4915:HG4_PB_SVrefine2Falcon1Dovetail_4136:HG4_Ill_svaba_8930:HG4_Ill_scalpel_6632:HG4_Ill_manta_1705:HG4_Ill_SVrefine2DISCOVARDovetail_5077:HG4_Ill_Krunchall_10177:HG4_Ill_GATKHC_11504:HG4_Ill_GATKHCSBGrefine_4830:HG4_Ill_250bpfermikitraw_9609:HG4_Ill_150bpfermikitraw_9210:HG4_CG_vcfBeta_4532:HG4_10X_allpass_1354:HG3_PB_pbsv_6661:HG3_PB_assemblyticsfalcon_22878:HG3_PB_SVrefine2PBcRDovetail_3143:HG3_Ill_svaba_8915:HG3_Ill_scalpel_6874:HG3_Ill_manta_1620:HG3_Ill_SVrefine2DISCOVARDovetail_5182:HG3_Ill_Krunchall_9609:HG3_Ill_GATKHC_11409:HG3_Ill_GATKHCSBGrefine_4716:HG3_Ill_250bpfermikitraw_9268:HG3_Ill_150bpfermikitraw_9042:HG3_CG_vcfBeta_3877:HG3_10X_allpass_1412:HG2_PB_pbsv_6847:HG2_PB_SVrefine2PBcRplusDovetail_9480:HG2_PB_SVrefine2PB10Xhap12_4991:HG2_Ill_svaba_8837:HG2_Ill_scalpel_6785:HG2_Ill_manta_1957:HG2_Ill_breakscan11_998:HG2_Ill_SpiralSDKrefine_14624:HG2_Ill_SVrefine2DISCOVARplusDovetail_11115:HG2_Ill_Krunchall_9838:HG2_Ill_GATKHC_11437:HG2_Ill_GATKHCSBGrefine_4775:HG2_Ill_250bpfermikitraw_9576:HG2_Ill_150bpfermikitraw_8988:HG2_CG_vcfBeta_4055:HG2_10X_allpass_1150;NumExactMatchSVs=43;ClusterMaxShiftDist=0.0106952;ClusterMaxSizeDiff=0.0106952;ClusterMaxEditDist=0.0106952;PBcalls=8;Illcalls=29;TenXcalls=4;CGcalls=3;PBexactcalls=7;Illexactcalls=29;TenXexactcalls=4;CGexactcalls=3;HG2count=17;HG3count=14;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-93;DistBack=124746;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:47280142-47280248;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:38:0|1:28:1:0:35:./.:0:0:0:0:0/1:15:34:./.:.:.:.:.:.
chr6	47350295	HG2_10X_SVrefine210Xhap12_4916	AATTAGGGGCTGAAATGCAAACTGGTAATAGAATATATTCACCTGACTCATCTCTTGAACATGTTTTCTTCCAGAACTAAGCAATAGAGGTGGTAATCATAGGATGCTACTGGTTTGGGT	A	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4502:HG2_PB_HySA_12642:HG4_PB_pbsv_6854:HG2_PB_pbsv_6848:HG3_PB_pbsv_6662:HG4_Ill_SVrefine2DISCOVARDovetail_5078:HG4_Ill_GATKHCSBGrefine_4831:HG4_10X_allpass_1355:HG3_Ill_GATKHCSBGrefine_4717:HG2_PB_SVrefine2PB10Xhap12_4992:HG2_PB_SVrefine2Falcon2Bionano_3433:HG2_Ill_SVrefine2DISCOVARplusDovetail_11116:HG2_Ill_GATKHCSBGrefine_4776:HG2_10X_allpass_1151:HG2_10X_SVrefine210Xhap12_4916;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4916:HG2_10X_allpass_1151:HG2_Ill_GATKHCSBGrefine_4776:HG2_Ill_SVrefine2DISCOVARplusDovetail_11116:HG2_PB_SVrefine2Falcon2Bionano_3433:HG2_PB_SVrefine2PB10Xhap12_4992:HG3_Ill_GATKHCSBGrefine_4717:HG4_10X_allpass_1355:HG4_Ill_GATKHCSBGrefine_4831:HG4_Ill_SVrefine2DISCOVARDovetail_5078;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0251046;ClusterMaxSizeDiff=0.0251046;ClusterMaxEditDist=0.0253165;PBcalls=6;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-119;DistBack=11820;DistForward=-97;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=126;REFWIDENED=6:47350296-47350540;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3384.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:0|1:29:2:0:35:./.:0:0:0:0:0/1:31:24:./.:.:.:.:.:.
chr6	47631516	HG2_Ill_GATKHCSBGrefine_4777	GTTTTTTTTTTTTTTTTTTTTTTACAGAGGTATTTTTTTTTTTTTACAGAGGAA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_6857:HG4_PB_assemblyticsfalcon_22413:HG4_PB_HySA_10128:HG3_Ill_scalpel_6882:HG3_Ill_GATKHC_11416:HG3_Ill_GATKHCSBGrefine_4718:HG2_PB_SVrefine2Falcon2Bionano_3436:HG3_PB_pbsv_6665:HG3_Ill_SVrefine2DISCOVARDovetail_5186:HG2_PB_pbsv_6851:HG4_Ill_scalpel_6638:HG4_Ill_GATKHC_11510:HG2_PB_HySA_12645:HG2_Ill_scalpel_6792:HG2_Ill_SVrefine2DISCOVARplusDovetail_11120:HG2_Ill_GATKHCSBGrefine_4777:HG2_10X_SVrefine210Xhap12_4918:HG2_PB_assemblyticsfalcon_22999;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4918:HG2_Ill_GATKHCSBGrefine_4777:HG2_Ill_SVrefine2DISCOVARplusDovetail_11120:HG2_Ill_scalpel_6792:HG2_PB_HySA_12645:HG4_Ill_GATKHC_11510:HG4_Ill_scalpel_6638;NumExactMatchSVs=7;ClusterMaxShiftDist=0.196078;ClusterMaxSizeDiff=0.196078;ClusterMaxEditDist=0.222222;PBcalls=8;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-53;DistBack=3493;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=6:47631516-47631599;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9811;PctRecOverlap=0.9815;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:21:1|0:0:20:29:1:./.:0:0:0:0:./.:1:4:./.:.:.:.:.:.
chr6	50204012	HG2_Ill_Krunchall_9875	TTTTCCAGGTGCTCTATGATTTTCCTTTCCTTTCCTTTAGTTTCTGCCAGTTGTCTGTGACATGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4929:HG4_Ill_Spiral_567:HG2_PB_pbsv_6863:HG4_Ill_svaba_8957:HG4_Ill_scalpel_6656:HG4_Ill_manta_1707:HG4_Ill_Krunchall_10209:HG4_Ill_GATKHC_11536:HG4_Ill_GATKHCSBGrefine_4846:HG4_Ill_250bpfermikitraw_9636:HG4_Ill_150bpfermikitraw_9234:HG2_PB_HySA_12686:HG2_Ill_svaba_8865:HG2_Ill_scalpel_6816:HG2_Ill_manta_1961:HG2_Ill_breakscan11_999:HG2_Ill_SpiralSDKrefine_14644:HG2_Ill_Krunchall_9875:HG2_Ill_GATKHC_11475:HG2_Ill_GATKHCSBGrefine_4794:HG2_Ill_250bpfermikitraw_9611:HG2_Ill_150bpfermikitraw_9024:HG4_PB_HySA_10152:HG4_PB_pbsv_6870:HG3_PB_assemblyticsfalcon_22913:HG4_PB_assemblyticsfalcon_22440:HG2_PB_SVrefine2Falcon1plusDovetail_10204:HG2_Ill_SVrefine2DISCOVARplusDovetail_11134;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9024:HG2_Ill_250bpfermikitraw_9611:HG2_Ill_GATKHCSBGrefine_4794:HG2_Ill_GATKHC_11475:HG2_Ill_Krunchall_9875:HG2_Ill_SpiralSDKrefine_14644:HG2_Ill_breakscan11_999:HG2_Ill_manta_1961:HG2_Ill_scalpel_6816:HG2_Ill_svaba_8865:HG2_PB_HySA_12686:HG4_Ill_150bpfermikitraw_9234:HG4_Ill_250bpfermikitraw_9636:HG4_Ill_GATKHCSBGrefine_4846:HG4_Ill_GATKHC_11536:HG4_Ill_Krunchall_10209:HG4_Ill_manta_1707:HG4_Ill_scalpel_6656:HG4_Ill_svaba_8957;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.0793651;PBcalls=7;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-64;DistBack=-1;DistForward=16108;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=67;REFWIDENED=6:50203967-50204097;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:21:1|0:5:18:21:1:./.:0:0:0:0:0/1:24:26:./.:.:.:.:.:.
chr6	50452466	HG2_Ill_SpiralSDKrefine_14645	TCTCATTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCAGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25722:HG3_Ill_Krunchall_9649:HG2_Ill_Krunchall_9877:HG3_Ill_Krunchall_9648:HG2_Ill_Spiral_490:HG2_PB_pbsv_6864:HG3_PB_pbsv_6675:HG3_Ill_MetaSV_4506:HG2_Ill_tnscope_802:HG3_Ill_scalpel_6905:HG3_Ill_manta_1622:HG3_Ill_SVrefine2DISCOVARDovetail_5199:HG3_Ill_GATKHCSBGrefine_4734:HG2_PB_SVrefine2PB10Xhap12_5007:HG2_PB_SVrefine2Falcon2Bionano_3446:HG2_Ill_scalpel_6817:HG2_Ill_manta_1962:HG2_Ill_SpiralSDKrefine_14645:HG2_Ill_SVrefine2DISCOVARplusDovetail_11135:HG2_Ill_MetaSV_4325:HG2_Ill_GATKHCSBGrefine_4795:HG2_10X_allpass_1152:HG2_10X_SVrefine210Xhap12_4930:HG3_Ill_Spiral_7552:HG2_Ill_breakscan11_1000;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4930:HG2_10X_allpass_1152:HG2_Ill_GATKHCSBGrefine_4795:HG2_Ill_MetaSV_4325:HG2_Ill_SVrefine2DISCOVARplusDovetail_11135:HG2_Ill_SpiralSDKrefine_14645:HG2_Ill_manta_1962:HG2_Ill_scalpel_6817:HG2_PB_SVrefine2Falcon2Bionano_3446:HG2_PB_SVrefine2PB10Xhap12_5007:HG3_Ill_GATKHCSBGrefine_4734:HG3_Ill_SVrefine2DISCOVARDovetail_5199:HG3_Ill_manta_1622:HG3_Ill_scalpel_6905;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00606061;ClusterMaxSizeDiff=0.00606061;ClusterMaxEditDist=0.00911854;PBcalls=5;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-330;DistForward=-328;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:50452467-50452807;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:27:0|1:31:0:3:26:./.:0:0:0:0:0/1:31:23:0/1:21:5:.:.:.
chr6	50765956	HG2_10X_allpass_1153	TAAGAATAGGTTTAACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_22443:HG2_PB_pbsv_6865:HG2_Ill_Krunchall_9880:HG3_PB_assemblyticsfalcon_22916:HG2_PB_assemblyticsPBcR_22261:HG4_Ill_MetaSV_4503:HG2_Ill_MetaSV_4326:HG4_PB_pbsv_6872:HG4_Ill_GATKHCSBGrefine_4847:HG2_PB_SVrefine2PB10Xhap12_5008:HG2_PB_SVrefine2Falcon2Bionano_3447:HG2_PB_SVrefine2Falcon1plusDovetail_10205:HG2_Ill_GATKHCSBGrefine_4797:HG2_10X_allpass_1153:HG2_10X_SVrefine210Xhap12_4932:HG2_Ill_breakscan11_1001:HG4_Ill_Spiral_568:HG2_PB_SVrefine2PBcRplusDovetail_9491:HG4_PB_SVrefine2Falcon1Dovetail_4146;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4932:HG2_10X_allpass_1153:HG2_Ill_GATKHCSBGrefine_4797:HG2_PB_SVrefine2Falcon1plusDovetail_10205:HG2_PB_SVrefine2Falcon2Bionano_3447:HG2_PB_SVrefine2PB10Xhap12_5008:HG4_Ill_GATKHCSBGrefine_4847:HG4_PB_pbsv_6872;NumExactMatchSVs=8;ClusterMaxShiftDist=0.101974;ClusterMaxSizeDiff=0.101974;ClusterMaxEditDist=0.171233;PBcalls=10;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=5623;DistForward=-291;DistMin=-291;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:50765957-50766282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:0|1:28:0:0:18:./.:0:0:0:0:0/1:32:16:0/1:32:9:.:.:0.432677
chr6	51199472	HG3_Ill_Cortex_3174	GTTTCTTCAGCTATAATATGTGCATAGCAACAGTACCTACTTTATAGGGTTGTTATGAAGATTAAATGAGGCAATCCATCTTAATTGCTTAAGAATGTACATGGTGTGTAGTAACACAGCACTCCTCAATTGATTTTATCAGGGATTAATATTACAGCTATTTGATTATGTTTATGCACGTTGCAATCTGGTGGGAAGTATGCATGAGAATGCAGGATTTCTATCTCCTGTTTTCACTTTTGTCTTTAAGTATAGGAATTTTGTCTTAAGACAAAATTTGTTCTTAAGACAAATTTGGTCCTTTCACAACAGGGCACAGCATGAAAAGCTGCCATGGAGGAGAAACTTTCCATTCCACTGAGGCAGCTGGTGACAGGGACTATCCTGATATAAGAGTAAAGCAGGAGGTTGTGGTCACCCTTTCTATTCAAAGTTGACCCAGTAATAAGAGGCTGGCCTCTCACCATCTTAAGAAAATGAAACTAGACAACTGTACCTTGGACTGCCAGAAAATCCTACTGCCACCTCCTACAAATAAGGGGAAAAAATCTGAAAAAGAAGAAAAAATAATAAAAATTATCCCCATTCTGTAAAAAGCAAACCTGAAACAGGATTTGTTTCACCGCATTTCCGAAGTCTAGCAAGTCGGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4933:HG4_PB_pbsv_6874:HG4_10X_allpass_1356:HG4_PB_HySA_10155:HG2_PB_assemblyticsPBcR_22263:HG3_PB_assemblyticsfalcon_22919:HG2_PB_assemblyticsfalcon_23035:HG2_PB_pbsv_6867:HG2_PB_HySA_12696:HG2_Ill_tnscope_803:HG4_PB_SVrefine2PBcRDovetail_3412:HG4_Ill_manta_1708:HG4_Ill_MetaSV_4504:HG4_Ill_GATKHCSBGrefine_4849:HG4_Ill_Cortex_3152:HG3_PB_pbsv_6676:HG3_Ill_manta_1623:HG3_Ill_MetaSV_4507:HG3_Ill_GATKHCSBGrefine_4737:HG3_Ill_Cortex_3174:HG3_10X_allpass_1413:HG2_PB_SVrefine2PBcRplusDovetail_9493:HG2_PB_SVrefine2PB10Xhap12_5009:HG2_PB_SVrefine2Falcon1plusDovetail_10207:HG2_Ill_manta_1964:HG2_Ill_breakscan11_1002:HG2_Ill_SpiralSDKrefine_14649:HG2_Ill_MetaSV_4327:HG2_Ill_GATKHCSBGrefine_4799:HG2_Ill_Cortex_7665:HG2_10X_allpass_1154;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4933:HG4_PB_SVrefine2PBcRDovetail_3412:HG4_Ill_manta_1708:HG4_Ill_MetaSV_4504:HG4_Ill_GATKHCSBGrefine_4849:HG4_Ill_Cortex_3152:HG3_PB_pbsv_6676:HG3_Ill_manta_1623:HG3_Ill_MetaSV_4507:HG3_Ill_GATKHCSBGrefine_4737:HG3_Ill_Cortex_3174:HG3_10X_allpass_1413:HG2_PB_SVrefine2PBcRplusDovetail_9493:HG2_PB_SVrefine2PB10Xhap12_5009:HG2_PB_SVrefine2Falcon1plusDovetail_10207:HG2_Ill_manta_1964:HG2_Ill_breakscan11_1002:HG2_Ill_SpiralSDKrefine_14649:HG2_Ill_MetaSV_4327:HG2_Ill_GATKHCSBGrefine_4799:HG2_Ill_Cortex_7665:HG2_10X_allpass_1154;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0123457;ClusterMaxSizeDiff=0.0123457;ClusterMaxEditDist=0.0138675;PBcalls=12;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-650;DistBack=175;DistForward=-650;DistMin=-650;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=6:51199473-51200126;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3390.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:55:./.:17:16:14:13:./.:0:0:0:0:0/1:54:23:0/1:56:17:.:.:.
chr6	51256286	HG4_Ill_SVrefine2DISCOVARDovetail_5095	TAAAATTAAGGTGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1003:HG4_Ill_Krunchall_10217:HG3_Ill_Krunchall_9656:HG2_Ill_Krunchall_9885:HG4_PB_assemblyticsfalcon_22447:HG3_PB_assemblyticsfalcon_22920:HG2_PB_assemblyticsfalcon_23036:HG2_PB_assemblyticsPBcR_22264:HG2_PB_HySA_12697:HG3_PB_pbsv_6677:HG2_PB_pbsv_6868:HG3_PB_HySA_10556:HG4_PB_HySA_10157:HG4_Ill_MetaSV_4505:HG3_Ill_MetaSV_4508:HG2_Ill_tnscope_804:HG2_Ill_MetaSV_4328:HG4_PB_pbsv_6875:HG4_PB_SVrefine2Falcon1Dovetail_4148:HG4_Ill_svaba_8963:HG4_Ill_scalpel_6664:HG4_Ill_manta_1709:HG4_Ill_SVrefine2DISCOVARDovetail_5095:HG4_Ill_GATKHCSBGrefine_4850:HG4_10X_allpass_1357:HG3_PB_SVrefine2PBcRDovetail_3153:HG3_Ill_svaba_8948:HG3_Ill_scalpel_6914:HG3_Ill_manta_1624:HG3_Ill_SVrefine2DISCOVARDovetail_5202:HG3_Ill_GATKHCSBGrefine_4738:HG3_10X_allpass_1414:HG2_PB_SVrefine2PBcRplusDovetail_9494:HG2_PB_SVrefine2PB10Xhap12_5010:HG2_PB_SVrefine2Falcon2Bionano_3449:HG2_PB_SVrefine2Falcon1plusDovetail_10208:HG2_Ill_svaba_8872:HG2_Ill_scalpel_6823:HG2_Ill_manta_1965:HG2_Ill_SVrefine2DISCOVARplusDovetail_11139:HG2_Ill_GATKHCSBGrefine_4800:HG2_10X_allpass_1155:HG2_10X_SVrefine210Xhap12_4934;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4934:HG2_10X_allpass_1155:HG2_Ill_GATKHCSBGrefine_4800:HG2_Ill_SVrefine2DISCOVARplusDovetail_11139:HG2_Ill_manta_1965:HG2_Ill_scalpel_6823:HG2_Ill_svaba_8872:HG2_PB_SVrefine2Falcon1plusDovetail_10208:HG2_PB_SVrefine2Falcon2Bionano_3449:HG2_PB_SVrefine2PB10Xhap12_5010:HG2_PB_SVrefine2PBcRplusDovetail_9494:HG3_10X_allpass_1414:HG3_Ill_GATKHCSBGrefine_4738:HG3_Ill_SVrefine2DISCOVARDovetail_5202:HG3_Ill_manta_1624:HG3_Ill_scalpel_6914:HG3_Ill_svaba_8948:HG3_PB_SVrefine2PBcRDovetail_3153:HG4_10X_allpass_1357:HG4_Ill_GATKHCSBGrefine_4850:HG4_Ill_SVrefine2DISCOVARDovetail_5095:HG4_Ill_manta_1709:HG4_Ill_scalpel_6664:HG4_Ill_svaba_8963:HG4_PB_SVrefine2Falcon1Dovetail_4148:HG4_PB_pbsv_6875;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.0869565;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=9738;DistForward=124485;DistMin=9738;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:51256287-51256616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3391.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:88:1/1:1:32:0:22:./.:0:0:0:0:1/1:0:44:0/1:2:11:.:.:.
chr6	51517349	HG3_Ill_SVrefine2DISCOVARDovetail_5203	TTATCTCTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4329:HG3_PB_assemblyticsfalcon_22921:HG2_PB_assemblyticsfalcon_23038:HG2_PB_assemblyticsPBcR_22266:HG4_Ill_Krunchall_10221:HG3_Ill_Krunchall_9658:HG2_Ill_Krunchall_9887:HG4_Ill_Spiral_569:HG2_PB_HySA_12700:HG4_PB_pbsv_6876:HG3_PB_pbsv_6678:HG2_PB_pbsv_6869:HG4_PB_SVrefine2Falcon1Dovetail_4149:HG3_PB_HySA_10559:HG4_PB_HySA_10159:HG4_Ill_scalpel_6667:HG4_Ill_GATKHCSBGrefine_4851:HG4_10X_allpass_1358:HG3_PB_SVrefine2PBcRDovetail_3154:HG3_Ill_scalpel_6916:HG3_Ill_manta_1625:HG3_Ill_SVrefine2DISCOVARDovetail_5203:HG3_Ill_GATKHCSBGrefine_4739:HG3_10X_allpass_1415:HG2_PB_SVrefine2PBcRplusDovetail_9495:HG2_PB_SVrefine2PB10Xhap12_5011:HG2_PB_SVrefine2Falcon2Bionano_3450:HG2_PB_SVrefine2Falcon1plusDovetail_10209:HG2_Ill_scalpel_6825:HG2_Ill_manta_1966:HG2_Ill_breakscan11_1004:HG2_Ill_SVrefine2DISCOVARplusDovetail_11140:HG2_Ill_GATKHCSBGrefine_4801:HG2_10X_allpass_1156:HG2_10X_SVrefine210Xhap12_4935:HG4_PB_assemblyticsfalcon_22451:HG4_Ill_MetaSV_4506:HG3_Ill_Spiral_7558:HG3_Ill_MetaSV_4509:HG2_Ill_tnscope_805:HG2_Ill_Spiral_491;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4935:HG2_10X_allpass_1156:HG2_Ill_GATKHCSBGrefine_4801:HG2_Ill_SVrefine2DISCOVARplusDovetail_11140:HG2_Ill_breakscan11_1004:HG2_Ill_manta_1966:HG2_Ill_scalpel_6825:HG2_PB_SVrefine2Falcon1plusDovetail_10209:HG2_PB_SVrefine2Falcon2Bionano_3450:HG2_PB_SVrefine2PB10Xhap12_5011:HG2_PB_SVrefine2PBcRplusDovetail_9495:HG3_10X_allpass_1415:HG3_Ill_GATKHCSBGrefine_4739:HG3_Ill_SVrefine2DISCOVARDovetail_5203:HG3_Ill_manta_1625:HG3_Ill_scalpel_6916:HG3_PB_SVrefine2PBcRDovetail_3154:HG4_10X_allpass_1358:HG4_Ill_GATKHCSBGrefine_4851:HG4_Ill_scalpel_6667:HG4_PB_HySA_10159;NumExactMatchSVs=21;ClusterMaxShiftDist=0.139673;ClusterMaxSizeDiff=0.139673;ClusterMaxEditDist=0.145185;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=2491;DistForward=49271;DistMin=2491;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:51517350-51517690;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:81:1/1:2:35:0:11:./.:0:0:0:0:1/1:0:43:1/1:1:11:.:.:.
chr6	51736109	HG2_PB_SVrefine2PB10Xhap12_5012	ATTACATCTATCTAATGGAATACTATTCGTCGATAATAAGGAATGTAATATTGATATGTGCAACAAGTTAGATGAATCCCAATGGCATTCAGGAGTGAAGGAAGCCAGTCCCAAAAGGTTACATACTATATGACTCCATTTATATGACTGTTGAAAAGGCAAAACTATAGTGACAGAGAATATATTAGTGATTGCCAGTGGTTTAAAGCAAGAGGAGGCTGTGGCTACAAAGATGGAGCAAGGAACTGGGGTGGATGCAACTGTTCTGTGTCTTGATTGTCGTGGTGGTTGTTACACAAATGTGTACATGTGTTAAAGCTCATAGAACTGTACATCAAAAAGTCAGTTTTGCTGTATATTAATATATTTTAAAAACTTTAACAAAAAGTCTGAAAAGAAAGAAACAATAAGTGTTTTCATGATTTTCCACAAAATCTCTTTGACAAACACTATCCAATCAAGCTGCTAGTGCCTCACTGTTCCATTGTTAAAAATAGTCTTACATTTGAGGATTACCAGAATTTTTGCAATCACTCCCAACATGAAAAATGATGAAACAATAAACAAATAGCAGAAAAGAAACTCAGTGGACACAAAGCTAGTCTAGAAATCAGAAGAAAACAAAAACTATAATTAATGGCCTTGGAGAAATAAGTATATTATATCCATGAAACAAATAGAAGCCTAAAATATTAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_6870:HG3_10X_allpass_1416:HG4_PB_assemblyticsfalcon_22454:HG2_Ill_tnscope_806:HG4_PB_SVrefine2Falcon1Dovetail_4150:HG4_Ill_manta_1710:HG4_Ill_SVrefine2DISCOVARDovetail_5096:HG4_Ill_MetaSV_4507:HG4_Ill_GATKHCSBGrefine_4852:HG4_Ill_Cortex_3155:HG4_10X_allpass_1359:HG3_PB_pbsv_6679:HG3_PB_SVrefine2PBcRDovetail_3155:HG3_Ill_manta_1626:HG3_Ill_SVrefine2DISCOVARDovetail_5204:HG3_Ill_MetaSV_4510:HG3_Ill_GATKHCSBGrefine_4740:HG3_Ill_Cortex_3176:HG2_PB_SVrefine2PBcRplusDovetail_9496:HG2_PB_SVrefine2PB10Xhap12_5012:HG2_PB_SVrefine2Falcon2Bionano_3451:HG2_PB_SVrefine2Falcon1plusDovetail_10210:HG2_Ill_manta_1967:HG2_Ill_SpiralSDKrefine_14653:HG2_Ill_SVrefine2DISCOVARplusDovetail_11141:HG2_Ill_MetaSV_4330:HG2_Ill_GATKHCSBGrefine_4802:HG2_Ill_Cortex_7668:HG2_10X_SVrefine210Xhap12_4936:HG3_PB_assemblyticsfalcon_22924:HG2_PB_assemblyticsfalcon_23042:HG2_PB_assemblyticsPBcR_22269:HG4_PB_pbsv_6877:HG4_Ill_Krunchall_10223:HG3_Ill_Krunchall_9662:HG2_Ill_breakscan11_1005:HG2_Ill_Krunchall_9890:HG2_10X_allpass_1157;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4936:HG2_Ill_Cortex_7668:HG2_Ill_GATKHCSBGrefine_4802:HG2_Ill_MetaSV_4330:HG2_Ill_SVrefine2DISCOVARplusDovetail_11141:HG2_Ill_SpiralSDKrefine_14653:HG2_Ill_manta_1967:HG2_PB_SVrefine2Falcon1plusDovetail_10210:HG2_PB_SVrefine2Falcon2Bionano_3451:HG2_PB_SVrefine2PB10Xhap12_5012:HG2_PB_SVrefine2PBcRplusDovetail_9496:HG3_Ill_Cortex_3176:HG3_Ill_GATKHCSBGrefine_4740:HG3_Ill_MetaSV_4510:HG3_Ill_SVrefine2DISCOVARDovetail_5204:HG3_Ill_manta_1626:HG3_PB_SVrefine2PBcRDovetail_3155:HG3_PB_pbsv_6679:HG4_10X_allpass_1359:HG4_Ill_Cortex_3155:HG4_Ill_GATKHCSBGrefine_4852:HG4_Ill_MetaSV_4507:HG4_Ill_SVrefine2DISCOVARDovetail_5096:HG4_Ill_manta_1710:HG4_PB_SVrefine2Falcon1Dovetail_4150;NumExactMatchSVs=25;ClusterMaxShiftDist=0.00719942;ClusterMaxSizeDiff=0.00719942;ClusterMaxEditDist=0.00719942;PBcalls=13;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-695;DistBack=41972;DistForward=-691;DistMin=-691;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:51736110-51736806;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3393.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:./.:0:0:0:0:./.:0:0:0:0:1/1:0:49:./.:2:23:.:.:.
chr6	54175456	HG2_Ill_svaba_8900	CTTTTTCTCTCTTTCTCTCCCTCTTTCTTTCTTCTTTTTTCTCTCTCTCTTTCTCTCCCTCTTTCT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9058:HG3_PB_pbsv_6697:HG3_Ill_svaba_8975:HG3_Ill_manta_1630:HG3_Ill_Krunchall_9686:HG3_Ill_GATKHC_11495:HG3_Ill_GATKHCSBGrefine_4748:HG3_Ill_250bpfermikitraw_9338:HG2_PB_pbsv_6889:HG2_PB_assemblyticsPBcR_22290:HG2_Ill_svaba_8900:HG2_Ill_SpiralSDKrefine_14674:HG2_Ill_Krunchall_9916:HG2_Ill_GATKHC_11523:HG2_Ill_GATKHCSBGrefine_4811:HG2_Ill_250bpfermikitraw_9647;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9058:HG3_Ill_svaba_8975:HG3_Ill_manta_1630:HG3_Ill_Krunchall_9686:HG3_Ill_GATKHC_11495:HG3_Ill_GATKHCSBGrefine_4748:HG3_Ill_250bpfermikitraw_9338:HG2_PB_pbsv_6889:HG2_PB_assemblyticsPBcR_22290:HG2_Ill_svaba_8900:HG2_Ill_SpiralSDKrefine_14674:HG2_Ill_Krunchall_9916:HG2_Ill_GATKHC_11523:HG2_Ill_GATKHCSBGrefine_4811:HG2_Ill_250bpfermikitraw_9647;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0150376;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.0150376;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-65;DistBack=31039;DistForward=148;DistMin=148;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=24;REFWIDENED=6:54175455-54175546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3395.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:30:./.:17:10:5:14:./.:0:0:0:0:0/1:31:23:./.:.:.:.:.:.
chr6	54556435	HG4_Ill_manta_1715	TAAAAGAATGTCCCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4944:HG2_PB_pbsv_6891:HG2_PB_HySA_12742:HG4_PB_assemblyticsfalcon_22481:HG3_PB_assemblyticsfalcon_22954:HG2_PB_assemblyticsfalcon_23073:HG2_PB_assemblyticsPBcR_22294:HG4_Ill_Krunchall_10246:HG2_Ill_Krunchall_9921:HG2_Ill_tnscope_810:HG2_Ill_MetaSV_4336:HG4_PB_pbsv_6895:HG4_PB_SVrefine2Falcon1Dovetail_4161:HG4_Ill_scalpel_6683:HG4_Ill_manta_1715:HG4_Ill_SVrefine2DISCOVARDovetail_5106:HG4_Ill_MetaSV_4511:HG4_Ill_GATKHCSBGrefine_4864:HG4_10X_allpass_1362:HG3_PB_pbsv_6699:HG3_PB_SVrefine2PBcRDovetail_3163:HG3_Ill_scalpel_6938:HG3_Ill_manta_1631:HG3_Ill_SVrefine2DISCOVARDovetail_5215:HG3_Ill_MetaSV_4515:HG3_Ill_GATKHCSBGrefine_4749:HG3_10X_allpass_1420:HG2_PB_SVrefine2PBcRplusDovetail_9508:HG2_PB_SVrefine2PB10Xhap12_5024:HG2_PB_SVrefine2Falcon2Bionano_3462:HG2_PB_SVrefine2Falcon1plusDovetail_10222:HG2_Ill_scalpel_6846:HG2_Ill_manta_1973:HG2_Ill_breakscan11_1006:HG2_Ill_SVrefine2DISCOVARplusDovetail_11152:HG2_Ill_GATKHCSBGrefine_4814:HG2_10X_allpass_1160;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4944:HG4_PB_pbsv_6895:HG4_PB_SVrefine2Falcon1Dovetail_4161:HG4_Ill_scalpel_6683:HG4_Ill_manta_1715:HG4_Ill_SVrefine2DISCOVARDovetail_5106:HG4_Ill_MetaSV_4511:HG4_Ill_GATKHCSBGrefine_4864:HG4_10X_allpass_1362:HG3_PB_pbsv_6699:HG3_PB_SVrefine2PBcRDovetail_3163:HG3_Ill_scalpel_6938:HG3_Ill_manta_1631:HG3_Ill_SVrefine2DISCOVARDovetail_5215:HG3_Ill_MetaSV_4515:HG3_Ill_GATKHCSBGrefine_4749:HG3_10X_allpass_1420:HG2_PB_SVrefine2PBcRplusDovetail_9508:HG2_PB_SVrefine2PB10Xhap12_5024:HG2_PB_SVrefine2Falcon2Bionano_3462:HG2_PB_SVrefine2Falcon1plusDovetail_10222:HG2_Ill_scalpel_6846:HG2_Ill_manta_1973:HG2_Ill_breakscan11_1006:HG2_Ill_SVrefine2DISCOVARplusDovetail_11152:HG2_Ill_GATKHCSBGrefine_4814:HG2_10X_allpass_1160;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0818182;ClusterMaxSizeDiff=0.0818182;ClusterMaxEditDist=0.0818182;PBcalls=14;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=-153;DistForward=15959;DistMin=-153;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:54556436-54556784;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3396.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:0:30:1:33:./.:0:0:0:0:1/1:0:46:0/1:3:15:.:.:.
chr6	54780306	HG2_PB_SVrefine2PB10Xhap12_5025	TAGAAACTCACATTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_10582:HG4_PB_assemblyticsfalcon_22483:HG2_PB_assemblyticsfalcon_23075:HG2_PB_SVrefine2Falcon1plusDovetail_10223:HG4_PB_SVrefine2Falcon1Dovetail_4162:HG2_PB_HySA_12744:HG3_PB_pbsv_6700:HG3_Ill_Krunchall_9690:HG2_PB_pbsv_6892:HG2_Ill_Krunchall_9923:HG2_PB_assemblyticsPBcR_22296:HG2_PB_PB10Xdip_25764:HG2_PB_SVrefine2PB10Xhap12_5026:HG3_Ill_MetaSV_4516:HG2_Ill_tnscope_811:HG2_Ill_MetaSV_4337:HG3_PB_assemblyticsfalcon_22957:HG3_PB_SVrefine2PBcRDovetail_3164:HG3_PB_SVrefine2Falcon1Dovetail_4164:HG3_Ill_manta_1632:HG3_Ill_GATKHCSBGrefine_4750:HG3_10X_allpass_1421:HG2_PB_SVrefine2PBcRplusDovetail_9509:HG2_PB_SVrefine2PB10Xhap12_5025:HG2_Ill_manta_1974:HG2_Ill_SVrefine2DISCOVARplusDovetail_11153:HG2_Ill_GATKHCSBGrefine_4815:HG2_10X_allpass_1161:HG2_10X_SVrefine210Xhap12_4946:HG2_Ill_breakscan11_1007;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4946:HG2_10X_allpass_1161:HG2_Ill_GATKHCSBGrefine_4815:HG2_Ill_SVrefine2DISCOVARplusDovetail_11153:HG2_Ill_manta_1974:HG2_PB_SVrefine2PB10Xhap12_5025:HG2_PB_SVrefine2PBcRplusDovetail_9509:HG3_10X_allpass_1421:HG3_Ill_GATKHCSBGrefine_4750:HG3_Ill_manta_1632:HG3_PB_SVrefine2Falcon1Dovetail_4164:HG3_PB_SVrefine2PBcRDovetail_3164:HG3_PB_assemblyticsfalcon_22957;NumExactMatchSVs=13;ClusterMaxShiftDist=0.163934;ClusterMaxSizeDiff=0.163934;ClusterMaxEditDist=0.330033;PBcalls=16;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=51952;DistForward=65746;DistMin=51952;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:54780307-54780650;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3397.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:43:0|1:23:0:1:38:./.:0:0:0:0:0/1:26:22:0/1:31:6:.:.:.
chr6	54846381	HG2_PB_SVrefine2PBcRplusDovetail_9510	TCATGGATTTAGGTTGGTGTTTATGTTAAAAATACTTAAATAATTTAAGTCTGAGTCATCTAATTGTTATTTGCACCATGATTTGAAAACACATATTTACGTGATTTCTGTTGCTGCATAAAAAGTTACTACAGATAGCAGCTTAAACCATTTATTAATTATCTCATGATTTCCATGGGTTAGGAGTCCAAGGGTGGCTTACTGAGTCCTCTTCTCAGGGTATCGCGAGGCTGCAATCCAGGTGTTGGCTGGGCTGCATTCCATTCTCAGGGTTCTCTTCCAAGCTCATGTGGTTGCCAGCAGAATTCCATTTGTGTGTATGTGTGATTATAGGAGTGAAGTCCCTCTTTTCTATGATTTTATGTGATTATAAGACTGTCAGCCAGGATTTGCTTTCTGCTCCTAGAGGCCACTTGCAGTTCCTGGCCTTATGGCCTCTCCTAGTCCCTCTCTCCACATGGCAGCTTACTTTTTCAAGACCTGCAGAAGAATGTTTCTCTTTGGGGATGGCCAAGCATTTTTTTTTTTTTCAAGAACTATCTTGATTACATTATACCTATCCAGGATAATATCCCTTTTGATGAACTCAAGGGACCTTAGTTATAGCTGTAAAATATTTGCACCTGTTATATAAAGTAGGGTAATTATGGTACTAATACCCCATCACCTCTGCCAGGTTCTATTCATTAGAATCAAATCACAGGGGAGAGGATAATGCAGGGTGTAACACCAAGAGTTGGATTCTCAGGGGCATCTTAGAGTTCTATCTACCACTTTGAGGAATATTTAATTTATTGAAAAAATGTTTTATATATAATATTTAATTTAGAAAAATCCAAAACACCTTACATAATATTAAAACAGTGTAACAGTTAAAGGACAATGTAGAACTAAACTAAATACAACCAATGGCCTTCCCCTGAGTTGTATAATTAAGAGTGATTTTTGTTTATTCTTCACAGCTTATTTATAAATTCCATATTTTCTACAGCAAGCAAGTGATGCTTTTATAATTAGAAATGTTGTATCTAGGTTAAGAGCATGGATACTGGAACCAACTGACTGAACTGTAATTGAGATCTGCAATTTAAAAGCTCTGTGATTAGGGTAAACTATCCACACTGAGCCTTTGTTTTTGTTTTTTAAACAAAGAATCTGACTCCATTTCTGTTGATTGCTATCAGCTTTCATGCCCTGCCACTCCTTATGGACCCTCTGCTTCCTTTCTAGAGAATGTGATAAGAGAGCCTGAGTGTTCCCTCCTGTGGCTCTGGTAAAAAGTTTAAACCATACAAAAACCCTAAAAGCCAAGCCCGTCTCCTTCCCTACTCTCAATCCATTTCGGGACTGCTTGGGAGCCTCCCCTCTCCTCAGAAAACCTCATTATGTGGGTAACAAATATGTTCATACCCTCTGTGCATGTGTAGTGTCATCATTCTCAACAACTCAACCAACTTTTGAGTGGGGAGAGCCCATTCTGCCTCTTCAGGGTGACCACAACACTTTATTTGTGAAATGGAGTTATTAATAGTATTGACACACTCATTTATTATAAGGAAAAAATTTATTAATGTATATAAAAGCACTTAAAACAGTGCCTGCACATAGTAAATGCAAGGCTCTTGTATCGGTTCGAACCCCAAGAGCATGCCAACAAACAACACAAGGTGGTGTGGAGCAACACACTGTTTTTAATGAGCGCCTGGGTGCAGATGGGCTGAGGCCTAAAATGGCGTCAGCAACAAATTAGGACGAGGCAGGGGTTTTATAGTCTCCTATAAACAGGAAGTGTCTCAGTCTGACGTAACTGCTACGCTGTACCGCTGTACCCGGACGGCCTCTCTTTTGGTCTTCAGCGGGTACCGTTTCTTCCAGCCAGCTCTCTTCCTACTTCTGCTGTCTTGCTGACGCAAGTGCCTTGGGACTGGGCCTGAGGAGGGGGGAGTTATTAATTCCCTTAAGCTTTCAGGCCCCTGGGAGAATCGTTCAGTAAACATCATGTAAGTAAGTGTTAACTGTAGATACTTATAAATATTATTGGTGATCTGATTATTTGCCTTATGCTGCTGATTCTGCCAACCATAATTGTTTTACAAAAGAAAATTAACATAATATTGTATGCTATAGCAAAAATTTTTTAAGTCCTTTAGAAAAGAAAAAAACTACATGCTATATACTGTAATGTAATTTAGAGAGTAAATTGTGTTTTCAGTCATTTCCAAAATTAAAGAAAATGGACTTCATTTATTATAATTTGAATTTTGATTATTTTTAGCCTTTAAATAACATATAATTATACATCAAGCACCTATTTATCTAAAACTTAAAGTTACAGCATGCTTTTACAAACACTTTTCCTTAATCTATGGATACATAAAATGTTTGTAAATGGGTTAGAATCAGGAATTTGTTCTTTAACCAGCTTCTGGAATTTATTCATGGAGATCTGTTAGGTTTCCTATTTTTAAATCTGGAGGACTATAGAATGAAAAAAATATTAGAATGATGGCTTATGGCATTAGAAATTTTTATAGCAGCTTTATTCATGATTGCCAAAACTTGAAAGGAAGCAAGATGCCCTTCGTAGGTGAACGGATAACCAAACAGAAGTAGAAGTACATCCATACAATGGAAACTACTTAGAGATAAAAAGATATGAGGTATTAAGCCACAGAACAACATGGAGGAGCCTTAAATGCACATTGCTAAGTGAAAGAAGCCAATCTGGAAAGGCTACAGACTGTATGCTTCCAACAATATAATGTTCTGAAATAGCTGAAGCCATGGTCAAAATAAAAAGATCTGTGGTTGCCCAAAGCTCAGGGGAGAGGAGGTTAAGGATACACAGATGGAGCACAGAAGATTTTTAGGGCAGTGAAACTATTCTGTATAATACTGTGATAGTGGATACATGTCATTATACACTGCTCAAAAAAGAAAACTTGAGGTCAATATCCTTGATAAACATCAATGCAAAAATCCTCAAAAAATACTAGTAAATCAAATCCAGAAGCACAACAAAAAGCTAATCTACCGTGATTAAGTAGGCTTCATCCTGAGGATGCAAGATTGGTTCAACATATGCAAATCAATAAACGTGATTCATCACTTAAACAGAACTAAAGACAAAACCACATGATTATCTCAGTAGATGTAGAAAAGACTTTTGATAAAATTCAACATTCCTTCATGTTAAAAACTTTCAATGAACTAGGTATTGAAGAAACATACTTCAAAATAATAATAGTCATCTATGACAAACCCACAGCCAACATTATACTGAATGGGCAAAAGCCGCAAACATTCCCCTTCAAAACTGGCACAAGGCAAGATGCCCTCTCTCAACACTTCTATTTAACATAGTATTGGGTGTCGTAGCCATAGCAATCAGGCAAGAGGAAGAAATAAAGGACATCCAAGTAGGAAGACAGGAAGTCAAACTATCTCTGTTTGTAGACAACATGATTCCATATCTAGAAAACCCCATAGTCACAGGCCCTAAACTCCTCTAGCTGATAAACAACTTCAGCAAAGTTGTAGGATACAAAATCAACATACAAAAATCACTAACATTCTTATATACCAACAATAGCCAAATCAGACAGGCAATACCATTCACAATTGCCACATATACAAAATTAAATACCTAGGAATATAGCTAATCAGGGAGGTGAGAGTTCTTCACAATGATAATTACAAAACACTGCTCAAGGAAATCAGAGAAAACACAAACAAATGGAAAAACATCCCATGATCACAGATAGGCAGAATCAGTATCATTAAAATGGCTATACTGCCCAAAGCAATTTATAGATTCAATGCTATTCCTATCAAACTACCAAAGACATTCATCACAGAACTAGAAAAAACTATTTTATAATTCACATGGAACCAAAAAAAGAGCCCGAATACCCAAGGCAATCCTAAGCGAAAAGAATAAACCTGGAGGCATCATGCTACCTGACTTCAAACTATACTACAAAGCTACACTAACCAAAATAGCATGGTACTCATACGAAAACAGGCCCATACCAGTGAAACAAAATAGAAAGCCCAGAAATGAGGCTGCATAGCTATGACCATCTGATCTTTGACAAAGCTGACAAAAACAAGCAATGGGGAAAAGATTCCCTATCCAATAAATGGTGCTGGCATAACTGCCTAGCCATAGGCAGATTGAAGTTGGAGCCCTACCTTTCACCATATACAAAAATAAGTCAAGATGGGTTGAAGACTTAAATGTAAAACCCAGAGCTATAAAAACTCTGGAAGATAACCTAGGCAATACCATCCTGGACATAGGAACAGGCAAAGATTTCATGACAAAAACTAGCAAACAAATCTCAATAAAAATTGACAAGTGCTATCTAATTAAGCTTAAGAGCTCTGCACAGCAAAAGAAAGTATCAACAGAGTAAATGGACAACCTACAGAATGGGATAAAATATTTGCAAACTATGCATCTGACAAAGGTCTAATATCCAGCATCTACAAGGAATTTAAACAAATTTATAACAGAAAAACAACCCCATTAAAAAGTGGGCAAAGGACATGACCAGAAACTTCTCAGAAAGAGATATACATGCGGGCAACAAGAATATTAAAAAAAGCTCAATATCACTGATCATTAGAGAAACGCAAATCAAAACCACAATGGGATAACATTTCACACCAGTCAGAATGGCTATTATCAAAAAGTCAGAAAACAACAGATGCTGGCGAGGCTGCAGAGAAAAGGGAACACTTACACACTGTTGGCAGGAGTGTAAATTAGTTCAACAATTGTGGAAAGCAGTATGGAGATTTTTCAAAGAGCTAAAAGCAGACCTACTGTTCAACTCCACAATCCCATTACTGGGTATATACCCAGAGGAATATAAATCATTCTACCATAAAGACACATTCATGCAAATCTCCATTGCAGCACTATTCACAATTGCAAAGACATGGAGAAATGTCCATCAATGAGAGATTGGATAAAGAAAATGTGATCGTGTACACCATGGAATACTATGCAGCCACAAAAAAGAATGAGATAGATCATGACTTTTGTGGGAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4947:HG3_PB_pbsv_6701:HG3_Ill_Krunchall_9691:HG2_Ill_Krunchall_9924:HG2_Ill_MetaSV_4338:HG2_Ill_tnscope_812:HG3_Ill_SVrefine2DISCOVARDovetail_5216:HG3_Ill_MetaSV_4517:HG2_PB_pbsv_6893:HG2_PB_SVrefine2PBcRplusDovetail_9510:HG2_PB_SVrefine2PB10Xhap12_5027:HG2_PB_SVrefine2Falcon2Bionano_3463:HG2_PB_SVrefine2Falcon1plusDovetail_10224:HG2_Ill_SpiralSDKrefine_14677;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4947:HG3_Ill_SVrefine2DISCOVARDovetail_5216:HG3_Ill_MetaSV_4517:HG2_PB_pbsv_6893:HG2_PB_SVrefine2PBcRplusDovetail_9510:HG2_PB_SVrefine2PB10Xhap12_5027:HG2_PB_SVrefine2Falcon2Bionano_3463:HG2_PB_SVrefine2Falcon1plusDovetail_10224:HG2_Ill_SpiralSDKrefine_14677;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00118601;ClusterMaxSizeDiff=0.00118601;ClusterMaxEditDist=0.00118601;PBcalls=6;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-5057;DistBack=65746;DistForward=-5055;DistMin=-5055;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=6:54846382-54851445;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3398.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:65:60:0|1:53:1:8:31:./.:0:0:0:0:0/1:51:13:0/1:356:176:5196:.:.
chr6	54864363	HG2_PB_SVrefine2Falcon1plusDovetail_10225	TAAGAAAACACAAGTTGGCCGGGCGCGGTGGCTCACCCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAATGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1008:HG2_10X_allpass_1162:HG4_PB_assemblyticsfalcon_22484:HG3_PB_assemblyticsfalcon_22959:HG2_PB_assemblyticsfalcon_23076:HG2_PB_assemblyticsPBcR_22297:HG4_Ill_Krunchall_10248:HG3_PB_pbsv_6702:HG2_PB_pbsv_6894:HG2_Ill_Krunchall_9925:HG4_Ill_Spiral_572:HG3_Ill_Spiral_7584:HG2_Ill_Spiral_494:HG3_PB_HySA_10583:HG2_PB_HySA_12745:HG4_Ill_MetaSV_4513:HG2_Ill_tnscope_813:HG4_PB_pbsv_6899:HG4_PB_SVrefine2Falcon1Dovetail_4163:HG4_Ill_svaba_8991:HG4_Ill_scalpel_6686:HG4_Ill_manta_1717:HG4_Ill_SVrefine2DISCOVARDovetail_5108:HG4_Ill_GATKHCSBGrefine_4867:HG4_10X_allpass_1364:HG3_PB_assemblyticsfalcon_22958:HG3_PB_SVrefine2PBcRDovetail_3165:HG3_PB_SVrefine2Falcon1Dovetail_4165:HG3_Ill_svaba_8979:HG3_Ill_scalpel_6940:HG3_Ill_manta_1633:HG3_Ill_SVrefine2DISCOVARDovetail_5217:HG3_Ill_MetaSV_4518:HG3_Ill_GATKHCSBGrefine_4751:HG3_10X_allpass_1422:HG2_PB_SVrefine2PBcRplusDovetail_9511:HG2_PB_SVrefine2PB10Xhap12_5028:HG2_PB_SVrefine2Falcon2Bionano_3464:HG2_PB_SVrefine2Falcon1plusDovetail_10225:HG2_Ill_svaba_8904:HG2_Ill_scalpel_6848:HG2_Ill_manta_1975:HG2_Ill_SVrefine2DISCOVARplusDovetail_11154:HG2_Ill_MetaSV_4339:HG2_Ill_GATKHCSBGrefine_4816:HG2_10X_SVrefine210Xhap12_4948;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4948:HG2_Ill_GATKHCSBGrefine_4816:HG2_Ill_MetaSV_4339:HG2_Ill_SVrefine2DISCOVARplusDovetail_11154:HG2_Ill_manta_1975:HG2_Ill_scalpel_6848:HG2_Ill_svaba_8904:HG2_PB_SVrefine2Falcon1plusDovetail_10225:HG2_PB_SVrefine2Falcon2Bionano_3464:HG2_PB_SVrefine2PB10Xhap12_5028:HG2_PB_SVrefine2PBcRplusDovetail_9511:HG3_10X_allpass_1422:HG3_Ill_GATKHCSBGrefine_4751:HG3_Ill_MetaSV_4518:HG3_Ill_SVrefine2DISCOVARDovetail_5217:HG3_Ill_manta_1633:HG3_Ill_scalpel_6940:HG3_Ill_svaba_8979:HG3_PB_SVrefine2Falcon1Dovetail_4165:HG3_PB_SVrefine2PBcRDovetail_3165:HG3_PB_assemblyticsfalcon_22958:HG4_10X_allpass_1364:HG4_Ill_GATKHCSBGrefine_4867:HG4_Ill_SVrefine2DISCOVARDovetail_5108:HG4_Ill_manta_1717:HG4_Ill_scalpel_6686:HG4_Ill_svaba_8991:HG4_PB_SVrefine2Falcon1Dovetail_4163:HG4_PB_pbsv_6899;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0933126;ClusterMaxSizeDiff=0.0933126;ClusterMaxEditDist=0.0933126;PBcalls=17;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=12922;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:54864364-54864705;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3399.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:72:1/1:1:36:0:22:./.:0:0:0:0:1/1:0:43:./.:1:15:.:.:.
chr6	55341738	HG2_Ill_MetaSV_4340	CTGCTCTTAAATCAAATTATGAATTCGCTGTCCTTATGTGTAAGCCTTGTTTATAAAAATTATGGGCAAAAATCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTATGTAACAAACCTGCACATTGTGCACATGTACCCCAGAACTTAGAGTATTTTATATATATCATATATATATAATAGATATAATATATATATTATATATTATAATATAATATATATTATATTTATATATTATATATTATATAATATATATTATATTATAATATATAATATATATTATATTTATATAATATATAATATATATTATATAATATATATTATATATTATATATAAAATAATATATATTATATATATAATATATATTATATTATATAATATATATTATATTTAGATAATATATATTATATTAATATAATATATATTATCTAAATATAATATATATTATCTAAATATATATTATCTTAATATATATTATATATTATATATATAATATATTACATATAATATATAATATATATATTATATTACATATACATATTACATATATTATATATGTAATTACATATATATATAATA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_6897:HG4_PB_pbsv_6901:HG2_Ill_tnscope_814:HG4_PB_assemblyticsfalcon_22488:HG4_Ill_MetaSV_4514:HG4_Ill_GATKHCSBGrefine_4869:HG4_10X_allpass_1365:HG2_PB_assemblyticsfalcon_23081:HG2_PB_assemblyticsPBcR_22302:HG2_PB_SVrefine2PBcRplusDovetail_9513:HG2_PB_SVrefine2PB10Xhap12_5030:HG2_PB_SVrefine2Falcon2Bionano_3466:HG2_PB_SVrefine2Falcon1plusDovetail_10226:HG2_Ill_manta_1976:HG2_Ill_breakscan11_1009:HG2_Ill_SpiralSDKrefine_14681:HG2_Ill_SVrefine2DISCOVARplusDovetail_11157:HG2_Ill_MetaSV_4340:HG2_Ill_GATKHCSBGrefine_4817:HG2_10X_SVrefine210Xhap12_4949:HG4_Ill_Krunchall_10253:HG2_Ill_Krunchall_9930;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4949:HG2_Ill_GATKHCSBGrefine_4817:HG2_Ill_MetaSV_4340:HG2_Ill_SVrefine2DISCOVARplusDovetail_11157:HG2_Ill_SpiralSDKrefine_14681:HG2_Ill_breakscan11_1009:HG2_Ill_manta_1976:HG2_PB_SVrefine2Falcon1plusDovetail_10226:HG2_PB_SVrefine2Falcon2Bionano_3466:HG2_PB_SVrefine2PB10Xhap12_5030:HG2_PB_SVrefine2PBcRplusDovetail_9513:HG2_PB_assemblyticsPBcR_22302:HG2_PB_assemblyticsfalcon_23081:HG4_10X_allpass_1365:HG4_Ill_GATKHCSBGrefine_4869:HG4_Ill_MetaSV_4514;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00841043;ClusterMaxSizeDiff=0.00841043;ClusterMaxEditDist=0.00841043;PBcalls=9;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-595;DistBack=7535;DistForward=-595;DistMin=-595;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:55341739-55342334;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3400.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:42:./.:18:13:6:17:./.:0:0:0:0:0/1:48:19:0/1:46:13:.:.:.
chr6	55461821	HG3_Ill_GATKHCSBGrefine_4758	ATGCACAAAACCCAATGATTTTTGTGATCAGCAACCAAATATGTGTATCATTCGCTTTTCCACATTTTGTTTGAATTTTATTTCAAGGTTGAGT	A	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_25773:HG2_PB_assemblyticsPBcR_22306:HG2_PB_SVrefine2PBcRplusDovetail_9517:HG2_PB_assemblyticsfalcon_23084:HG2_PB_SVrefine2PBcRplusDovetail_9516:HG3_PB_pbsv_6707:HG3_Ill_svaba_8986:HG3_Ill_scalpel_6947:HG3_Ill_manta_1636:HG3_Ill_SVrefine2DISCOVARDovetail_5220:HG3_Ill_Krunchall_9701:HG3_Ill_GATKHC_11509:HG3_Ill_GATKHCSBGrefine_4758:HG3_Ill_Cortex_3187:HG3_Ill_250bpfermikitraw_9349:HG3_Ill_150bpfermikitraw_9121:HG3_CG_vcfBeta_3908:HG3_10X_allpass_1423:HG2_PB_SVrefine2Falcon1plusDovetail_10228:HG2_Ill_svaba_8908:HG2_Ill_scalpel_6854:HG2_Ill_manta_1978:HG2_Ill_breakscan11_1010:HG2_Ill_SpiralSDKrefine_14683:HG2_Ill_SVrefine2DISCOVARplusDovetail_11159:HG2_Ill_Krunchall_9934:HG2_Ill_GATKHC_11539:HG2_Ill_GATKHCSBGrefine_4821:HG2_Ill_Cortex_7683:HG2_Ill_250bpfermikitraw_9659:HG2_Ill_150bpfermikitraw_9071:HG2_CG_vcfBeta_4086:HG2_10X_SVrefine210Xhap12_4952:HG2_PB_pbsv_6899;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4952:HG2_CG_vcfBeta_4086:HG2_Ill_150bpfermikitraw_9071:HG2_Ill_250bpfermikitraw_9659:HG2_Ill_Cortex_7683:HG2_Ill_GATKHCSBGrefine_4821:HG2_Ill_GATKHC_11539:HG2_Ill_Krunchall_9934:HG2_Ill_SVrefine2DISCOVARplusDovetail_11159:HG2_Ill_SpiralSDKrefine_14683:HG2_Ill_breakscan11_1010:HG2_Ill_manta_1978:HG2_Ill_scalpel_6854:HG2_Ill_svaba_8908:HG2_PB_SVrefine2Falcon1plusDovetail_10228:HG3_10X_allpass_1423:HG3_CG_vcfBeta_3908:HG3_Ill_150bpfermikitraw_9121:HG3_Ill_250bpfermikitraw_9349:HG3_Ill_Cortex_3187:HG3_Ill_GATKHCSBGrefine_4758:HG3_Ill_GATKHC_11509:HG3_Ill_Krunchall_9701:HG3_Ill_SVrefine2DISCOVARDovetail_5220:HG3_Ill_manta_1636:HG3_Ill_scalpel_6947:HG3_Ill_svaba_8986:HG3_PB_pbsv_6707;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0927835;ClusterMaxSizeDiff=0.0923077;ClusterMaxEditDist=0.103093;PBcalls=8;Illcalls=22;TenXcalls=2;CGcalls=2;PBexactcalls=2;Illexactcalls=22;TenXexactcalls=2;CGexactcalls=2;HG2count=21;HG3count=13;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-93;DistBack=-94;DistForward=-50;DistMin=-94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=6:55461822-55461918;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:38:./.:17:12:10:17:./.:0:0:0:0:0/1:45:32:./.:.:.:.:.:.
chr6	56075979	HG4_Ill_GATKHCSBGrefine_4873	ATATATGTATATATGTATATATACATATATATGTATATGTATATATACATATATATG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10233:HG4_Ill_svaba_8998:HG4_Ill_scalpel_6694:HG4_Ill_manta_1720:HG4_Ill_Krunchall_10258:HG4_Ill_GATKHC_11600:HG4_Ill_GATKHCSBGrefine_4873:HG4_Ill_250bpfermikitraw_9678:HG4_Ill_150bpfermikitraw_9275:HG3_Ill_svaba_8993:HG2_Ill_svaba_8910:HG2_Ill_manta_1980:HG2_Ill_breakscan11_1011:HG2_Ill_SpiralSDKrefine_14687:HG2_Ill_Krunchall_9936:HG2_Ill_GATKHC_11547:HG2_Ill_GATKHCSBGrefine_4824:HG2_Ill_250bpfermikitraw_9662:HG2_Ill_150bpfermikitraw_9074:HG3_PB_assemblyticsfalcon_22971:HG4_PB_SVrefine2Falcon1Dovetail_4169:HG2_10X_SVrefine210Xhap12_4954:HG3_Ill_svaba_8992:HG2_PB_SVrefine2PB10Xhap12_5037:HG3_Ill_scalpel_6951:HG3_Ill_Krunchall_9705:HG3_Ill_GATKHC_11514:HG3_Ill_GATKHCSBGrefine_4759:HG3_Ill_250bpfermikitraw_9353:HG3_Ill_150bpfermikitraw_9126;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9074:HG2_Ill_250bpfermikitraw_9662:HG2_Ill_GATKHCSBGrefine_4824:HG2_Ill_GATKHC_11547:HG2_Ill_Krunchall_9936:HG2_Ill_SpiralSDKrefine_14687:HG2_Ill_breakscan11_1011:HG2_Ill_manta_1980:HG2_Ill_svaba_8910:HG3_Ill_svaba_8993:HG4_Ill_150bpfermikitraw_9275:HG4_Ill_250bpfermikitraw_9678:HG4_Ill_GATKHCSBGrefine_4873:HG4_Ill_GATKHC_11600:HG4_Ill_Krunchall_10258:HG4_Ill_manta_1720:HG4_Ill_scalpel_6694:HG4_Ill_svaba_8998;NumExactMatchSVs=18;ClusterMaxShiftDist=0.269231;ClusterMaxSizeDiff=0.269231;ClusterMaxEditDist=0.269231;PBcalls=4;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-56;DistBack=4463;DistForward=-46;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1953;REFWIDENED=6:56066185-56076015;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3402.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:24:0|1:41:6:1:11:./.:0:0:0:0:0/1:40:25:./.:.:.:.:.:.
chr6	56898487	HG3_Ill_scalpel_6954	TTGTTGTCCTGTTTTTATTTCTCTGTGTTGTTTTTTTCTTATTTCTTAGAGGAGCAAAAAG	T	20	PASS	ClusterIDs=HG3_PB_pbsv_6711:HG3_PB_HySA_10598:HG2_PB_HySA_12769:HG4_Ill_svaba_9004:HG4_Ill_scalpel_6698:HG4_Ill_manta_1721:HG4_Ill_Krunchall_10264:HG4_Ill_GATKHC_11604:HG4_Ill_GATKHCSBGrefine_4874:HG4_Ill_Cortex_3162:HG4_Ill_250bpfermikitraw_9683:HG4_Ill_150bpfermikitraw_9280:HG4_CG_vcfBeta_4563:HG4_10X_allpass_1368:HG3_PB_assemblyticsfalcon_22977:HG3_Ill_svaba_8998:HG3_Ill_scalpel_6954:HG3_Ill_manta_1638:HG3_Ill_Krunchall_9710:HG3_Ill_GATKHC_11517:HG3_Ill_GATKHCSBGrefine_4760:HG3_Ill_Cortex_3189:HG3_Ill_250bpfermikitraw_9358:HG3_Ill_150bpfermikitraw_9131:HG3_CG_vcfBeta_3911:HG3_10X_allpass_1424:HG2_PB_assemblyticsfalcon_23092:HG2_PB_assemblyticsPBcR_22312:HG2_Ill_svaba_8918:HG2_Ill_scalpel_6862:HG2_Ill_manta_1982:HG2_Ill_SpiralSDKrefine_14691:HG2_Ill_Krunchall_9944:HG2_Ill_GATKHC_11551:HG2_Ill_GATKHCSBGrefine_4825:HG2_Ill_Cortex_7689:HG2_Ill_250bpfermikitraw_9669:HG2_Ill_150bpfermikitraw_9080:HG2_CG_vcfBeta_4091:HG4_PB_assemblyticsfalcon_22498:HG2_Ill_breakscan11_1012:HG4_PB_pbsv_6909:HG2_PB_pbsv_6905;NumClusterSVs=43;ExactMatchIDs=HG2_CG_vcfBeta_4091:HG2_Ill_150bpfermikitraw_9080:HG2_Ill_250bpfermikitraw_9669:HG2_Ill_Cortex_7689:HG2_Ill_GATKHCSBGrefine_4825:HG2_Ill_GATKHC_11551:HG2_Ill_Krunchall_9944:HG2_Ill_SpiralSDKrefine_14691:HG2_Ill_manta_1982:HG2_Ill_scalpel_6862:HG2_Ill_svaba_8918:HG2_PB_assemblyticsPBcR_22312:HG2_PB_assemblyticsfalcon_23092:HG3_10X_allpass_1424:HG3_CG_vcfBeta_3911:HG3_Ill_150bpfermikitraw_9131:HG3_Ill_250bpfermikitraw_9358:HG3_Ill_Cortex_3189:HG3_Ill_GATKHCSBGrefine_4760:HG3_Ill_GATKHC_11517:HG3_Ill_Krunchall_9710:HG3_Ill_manta_1638:HG3_Ill_scalpel_6954:HG3_Ill_svaba_8998:HG3_PB_assemblyticsfalcon_22977:HG4_10X_allpass_1368:HG4_CG_vcfBeta_4563:HG4_Ill_150bpfermikitraw_9280:HG4_Ill_250bpfermikitraw_9683:HG4_Ill_Cortex_3162:HG4_Ill_GATKHCSBGrefine_4874:HG4_Ill_GATKHC_11604:HG4_Ill_Krunchall_10264:HG4_Ill_manta_1721:HG4_Ill_scalpel_6698:HG4_Ill_svaba_9004;NumExactMatchSVs=36;ClusterMaxShiftDist=0.19469;ClusterMaxSizeDiff=0.19469;ClusterMaxEditDist=0.232143;PBcalls=9;Illcalls=29;TenXcalls=2;CGcalls=3;PBexactcalls=3;Illexactcalls=28;TenXexactcalls=2;CGexactcalls=3;HG2count=16;HG3count=14;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-60;DistBack=61606;DistForward=63017;DistMin=61606;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:56898486-56898548;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3403.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:67:1/1:1:17:1:20:./.:0:0:0:0:1/1:0:65:./.:.:.:.:.:.
chr6	57449499	HG2_PB_PB10Xdip_25806	CTTTCTTTTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAAACTCATCATTTC	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11167:HG2_PB_PB10Xdip_25806:HG4_PB_pbsv_6914:HG4_PB_SVrefine2Falcon1Dovetail_4173:HG3_PB_SVrefine2PBcRDovetail_3171:HG3_PB_SVrefine2Falcon1Dovetail_4168:HG3_Ill_SVrefine2DISCOVARDovetail_5226:HG2_PB_SVrefine2PBcRplusDovetail_9524:HG2_PB_SVrefine2PB10Xhap12_5045:HG2_PB_SVrefine2Falcon2Bionano_3473:HG2_PB_SVrefine2Falcon1plusDovetail_10238;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11167:HG2_PB_PB10Xdip_25806:HG4_PB_SVrefine2Falcon1Dovetail_4173:HG3_PB_SVrefine2PBcRDovetail_3171:HG3_PB_SVrefine2Falcon1Dovetail_4168:HG3_Ill_SVrefine2DISCOVARDovetail_5226:HG2_PB_SVrefine2PBcRplusDovetail_9524:HG2_PB_SVrefine2PB10Xhap12_5045:HG2_PB_SVrefine2Falcon2Bionano_3473:HG2_PB_SVrefine2Falcon1plusDovetail_10238;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00313972;ClusterMaxSizeDiff=0.00313972;ClusterMaxEditDist=0.00313972;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-318;DistBack=-306;DistForward=15601;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:57449487-57449819;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=0.9592;SizeDiff=0;StartDistance=13;EndDistance=13;GTMatch=0;TruScore=98;MatchId=3404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:./.:68:18:0|1:65:1:0:12:./.:0:0:0:0:./.:53:4:0/1:62:15:.:.:.
chr6	57618680	HG2_PB_SVrefine2PBcRplusDovetail_9525	ATTGTACCTATCTTGTAAACATCACAGAGGAGAGCTACAATGGAAAGTTGACTTCATTCTTTTTATTACATAGGTAGCTATGTTTTCTGTACTTATTTAGAATTTTAGAACATTATGATACATTATCCAATTTCATAGTATTGATGGTAGGAAGTACTGTTCACTGGCTCCAGACCCTCATGGCAGGTTTGTGCCAGATT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_498:HG4_PB_SVrefine2Falcon1Dovetail_4174:HG4_Ill_SVrefine2DISCOVARDovetail_5115:HG4_Ill_MetaSV_4521:HG4_10X_allpass_1370:HG3_PB_SVrefine2Falcon1Dovetail_4170:HG2_PB_SVrefine2PBcRplusDovetail_9525:HG2_PB_SVrefine2Falcon1plusDovetail_10241:HG2_Ill_manta_1985:HG2_Ill_breakscan11_1013:HG2_Ill_SVrefine2DISCOVARplusDovetail_11169:HG4_PB_pbsv_6919:HG2_PB_pbsv_6914:HG4_Ill_Spiral_577;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11169:HG2_Ill_breakscan11_1013:HG2_Ill_manta_1985:HG2_PB_SVrefine2Falcon1plusDovetail_10241:HG2_PB_SVrefine2PBcRplusDovetail_9525:HG3_PB_SVrefine2Falcon1Dovetail_4170:HG4_10X_allpass_1370:HG4_Ill_MetaSV_4521:HG4_Ill_SVrefine2DISCOVARDovetail_5115:HG4_PB_SVrefine2Falcon1Dovetail_4174;NumExactMatchSVs=10;ClusterMaxShiftDist=0.01;ClusterMaxSizeDiff=0.01;ClusterMaxEditDist=0.01;PBcalls=6;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-199;DistBack=-393;DistForward=-199;DistMin=-393;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=6:57618681-57618882;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3405.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:1|0:0:22:32:2:./.:0:0:0:0:0/1:32:9:./.:.:.:5386:.:.
chr6	57667887	HG4_Ill_150bpfermikitraw_9289	GTATATATATACATACATATATACATACGTATATACATATATACACACACATATACATA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_22323:HG2_PB_HySA_12782:HG2_PB_assemblyticsfalcon_23100:HG4_Ill_svaba_9020:HG4_Ill_manta_1724:HG4_Ill_Krunchall_10277:HG4_Ill_GATKHC_11614:HG4_Ill_GATKHCSBGrefine_4883:HG4_Ill_250bpfermikitraw_9692:HG4_Ill_150bpfermikitraw_9289:HG3_PB_pbsv_6719:HG3_PB_assemblyticsfalcon_22985:HG3_Ill_svaba_9016:HG3_Ill_Krunchall_9721:HG3_Ill_GATKHC_11524:HG3_Ill_GATKHCSBGrefine_4767:HG3_Ill_250bpfermikitraw_9364:HG3_Ill_150bpfermikitraw_9138:HG2_PB_pbsv_6917:HG2_Ill_svaba_8936:HG2_Ill_manta_1986:HG2_Ill_Krunchall_9960:HG2_Ill_GATKHC_11560:HG2_Ill_GATKHCSBGrefine_4833:HG2_Ill_250bpfermikitraw_9679:HG2_Ill_150bpfermikitraw_9090:HG4_PB_pbsv_6921;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9090:HG2_Ill_250bpfermikitraw_9679:HG2_Ill_GATKHCSBGrefine_4833:HG2_Ill_GATKHC_11560:HG2_Ill_Krunchall_9960:HG2_Ill_manta_1986:HG2_Ill_svaba_8936:HG2_PB_pbsv_6917:HG3_Ill_150bpfermikitraw_9138:HG3_Ill_250bpfermikitraw_9364:HG3_Ill_GATKHCSBGrefine_4767:HG3_Ill_GATKHC_11524:HG3_Ill_Krunchall_9721:HG3_Ill_svaba_9016:HG3_PB_assemblyticsfalcon_22985:HG3_PB_pbsv_6719:HG4_Ill_150bpfermikitraw_9289:HG4_Ill_250bpfermikitraw_9692:HG4_Ill_GATKHCSBGrefine_4883:HG4_Ill_GATKHC_11614:HG4_Ill_Krunchall_10277:HG4_Ill_manta_1724:HG4_Ill_svaba_9020;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.0689655;PBcalls=7;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=23748;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=189;REFWIDENED=6:57667888-57668134;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3406.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:48:1/1:4:16:2:21:./.:0:0:0:0:1/1:0:50:./.:.:.:.:.:.
chr6	62053977	HG2_10X_allpass_1167	GCTCAAAATGTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGAGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5060:HG4_10X_allpass_1374:HG3_PB_assemblyticsfalcon_22991:HG2_PB_SVrefine2PBcRplusDovetail_9530:HG4_Ill_Krunchall_10288:HG3_Ill_Krunchall_9735:HG2_Ill_Krunchall_9969:HG4_PB_pbsv_6930:HG3_PB_pbsv_6729:HG3_Ill_MetaSV_4530:HG2_Ill_tnscope_815:HG2_Ill_MetaSV_4350:HG4_PB_assemblyticsfalcon_22514:HG4_Ill_MetaSV_4525:HG4_Ill_GATKHCSBGrefine_4889:HG3_Ill_scalpel_6965:HG3_Ill_manta_1644:HG3_Ill_GATKHCSBGrefine_4773:HG3_10X_allpass_1431:HG2_PB_pbsv_6925:HG2_Ill_scalpel_6872:HG2_Ill_manta_1989:HG2_Ill_GATKHCSBGrefine_4836:HG2_10X_allpass_1167:HG2_Ill_breakscan11_1015:HG3_Ill_SVrefine2DISCOVARDovetail_5231;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_1167:HG2_Ill_GATKHCSBGrefine_4836:HG2_Ill_manta_1989:HG2_Ill_scalpel_6872:HG2_PB_pbsv_6925:HG3_10X_allpass_1431:HG3_Ill_GATKHCSBGrefine_4773:HG3_Ill_manta_1644:HG3_Ill_scalpel_6965:HG4_Ill_GATKHCSBGrefine_4889:HG4_Ill_MetaSV_4525:HG4_PB_assemblyticsfalcon_22514;NumExactMatchSVs=12;ClusterMaxShiftDist=0.271137;ClusterMaxSizeDiff=0.271137;ClusterMaxEditDist=0.271137;PBcalls=7;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=24106;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=32;REFWIDENED=6:62053963-62054315;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3407.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:0|1:29:0:1:33:./.:0:0:0:0:0/1:23:18:0/1:25:9:.:.:.
chr6	62278882	HG4_Ill_manta_1726	AGTGGGCATATGGGGAAGTGTGAGGTCCAAAAGCCATGCTTGCTTTCTTGGAAGGGAAGCTCATGGCATGGGGCAGG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_6730:HG4_PB_HySA_10231:HG3_PB_HySA_10635:HG3_PB_assemblyticsfalcon_22993:HG2_PB_HySA_12800:HG4_PB_assemblyticsfalcon_22516:HG2_PB_assemblyticsPBcR_22330:HG4_Ill_svaba_9028:HG4_Ill_scalpel_6709:HG4_Ill_manta_1726:HG4_Ill_Krunchall_10290:HG4_Ill_GATKHC_11625:HG4_Ill_GATKHCSBGrefine_4890:HG4_Ill_Cortex_3167:HG4_Ill_250bpfermikitraw_9703:HG4_Ill_150bpfermikitraw_9297:HG4_CG_vcfBeta_4578:HG4_10X_allpass_1375:HG3_Ill_svaba_9027:HG3_Ill_scalpel_6966:HG3_Ill_manta_1645:HG3_Ill_Krunchall_9736:HG3_Ill_GATKHC_11536:HG3_Ill_GATKHCSBGrefine_4774:HG3_Ill_Cortex_3194:HG3_Ill_250bpfermikitraw_9375:HG3_Ill_150bpfermikitraw_9148:HG3_10X_allpass_1432:HG2_PB_pbsv_6926:HG2_Ill_svaba_8943:HG2_Ill_scalpel_6873:HG2_Ill_breakscan11_1016:HG2_Ill_SpiralSDKrefine_14715:HG2_Ill_Krunchall_9971:HG2_Ill_GATKHC_11568:HG2_Ill_GATKHCSBGrefine_4837:HG2_Ill_Cortex_7735:HG2_Ill_250bpfermikitraw_9687:HG2_Ill_150bpfermikitraw_9096:HG2_CG_vcfBeta_4106:HG2_10X_allpass_1168:HG4_PB_pbsv_6931:HG4_PB_SVrefine2PBcRDovetail_3419:HG3_PB_SVrefine2PBcRDovetail_3179:HG3_PB_SVrefine2Falcon1Dovetail_4178:HG3_Ill_SVrefine2DISCOVARDovetail_5232:HG2_PB_SVrefine2PBcRplusDovetail_9531:HG2_PB_SVrefine2PB10Xhap12_5062:HG2_Ill_SVrefine2DISCOVARplusDovetail_11171:HG2_10X_SVrefine210Xhap12_4959;NumClusterSVs=50;ExactMatchIDs=HG2_10X_allpass_1168:HG2_CG_vcfBeta_4106:HG2_Ill_150bpfermikitraw_9096:HG2_Ill_250bpfermikitraw_9687:HG2_Ill_Cortex_7735:HG2_Ill_GATKHCSBGrefine_4837:HG2_Ill_GATKHC_11568:HG2_Ill_Krunchall_9971:HG2_Ill_SpiralSDKrefine_14715:HG2_Ill_breakscan11_1016:HG2_Ill_scalpel_6873:HG2_Ill_svaba_8943:HG2_PB_pbsv_6926:HG3_10X_allpass_1432:HG3_Ill_150bpfermikitraw_9148:HG3_Ill_250bpfermikitraw_9375:HG3_Ill_Cortex_3194:HG3_Ill_GATKHCSBGrefine_4774:HG3_Ill_GATKHC_11536:HG3_Ill_Krunchall_9736:HG3_Ill_manta_1645:HG3_Ill_scalpel_6966:HG3_Ill_svaba_9027:HG4_10X_allpass_1375:HG4_CG_vcfBeta_4578:HG4_Ill_150bpfermikitraw_9297:HG4_Ill_250bpfermikitraw_9703:HG4_Ill_Cortex_3167:HG4_Ill_GATKHCSBGrefine_4890:HG4_Ill_GATKHC_11625:HG4_Ill_Krunchall_10290:HG4_Ill_manta_1726:HG4_Ill_scalpel_6709:HG4_Ill_svaba_9028;NumExactMatchSVs=34;ClusterMaxShiftDist=0.147651;ClusterMaxSizeDiff=0.147651;ClusterMaxEditDist=0.147651;PBcalls=14;Illcalls=30;TenXcalls=4;CGcalls=2;PBexactcalls=1;Illexactcalls=28;TenXexactcalls=3;CGexactcalls=2;HG2count=19;HG3count=16;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-76;DistBack=28155;DistForward=10753;DistMin=10753;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=6:62278879-62278960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3408.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:49:0|1:21:1:5:48:./.:0:0:0:0:0/1:17:20:./.:.:.:.:.:.
chr6	62289714	HG2_10X_SVrefine210Xhap12_4960	GTACTTTGGGAGGCCGAGGTGGGTGGATCGCCTGAGGTTGGGAGTTTGAGACCACCCTGACCAACATGGAGAAACCCCGTCTCTACTAAAATTAGAAAATTAGCCAGGTGTGGTGGCACATGCCTGTAATCCCAGC	A	20	PASS	ClusterIDs=HG2_10X_allpass_1169:HG2_PB_assemblyticsfalcon_23108:HG2_PB_assemblyticsPBcR_22331:HG4_Ill_GATKHCSBGrefine_4891:HG2_Ill_GATKHC_11569:HG2_Ill_GATKHCSBGrefine_4838:HG2_Ill_SpiralSDKrefine_14716:HG2_PB_PB10Xdip_25866:HG2_PB_PB10Xdip_25865:HG2_PB_HySA_12801:HG4_Ill_Spiral_579:HG4_Ill_SVrefine2DISCOVARDovetail_5118:HG2_PB_SVrefine2PBcRplusDovetail_9532:HG2_PB_SVrefine2PB10Xhap12_5063:HG2_PB_SVrefine2Falcon2Bionano_3476:HG2_PB_SVrefine2Falcon1plusDovetail_10248:HG2_Ill_Spiral_499:HG2_10X_SVrefine210Xhap12_4960:HG4_Ill_Krunchall_10292:HG2_Ill_Krunchall_9972:HG4_Ill_Krunchall_10291:HG2_PB_pbsv_6927:HG4_PB_HySA_10232:HG4_PB_pbsv_6932:HG4_Ill_svaba_9029:HG4_Ill_MetaSV_4526:HG4_10X_allpass_1376:HG2_Ill_svaba_8944:HG2_Ill_MetaSV_4351;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4960:HG2_Ill_Spiral_499:HG2_PB_SVrefine2Falcon1plusDovetail_10248:HG2_PB_SVrefine2Falcon2Bionano_3476:HG2_PB_SVrefine2PB10Xhap12_5063:HG2_PB_SVrefine2PBcRplusDovetail_9532:HG4_Ill_SVrefine2DISCOVARDovetail_5118:HG4_Ill_Spiral_579;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0148699;ClusterMaxSizeDiff=0.0148148;ClusterMaxEditDist=0.0297398;PBcalls=12;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-135;DistBack=-123;DistForward=17828;DistMin=-123;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:62289714-62289849;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.9852;PctRecOverlap=0.9853;SizeDiff=2;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:31:1|0:1:29:39:1:./.:0:0:0:0:0/1:40:25:./.:.:.:.:.:.
chr6	63597635	HG2_PB_SVrefine2PBcRplusDovetail_9534	TTTGAGATTTCTTGTGTAAGCCTAAACTATCTCCATTTAATGTCTCATTTCTACATGTATAGAACAGAATAAAGACTTGCATGAAAACCCTTCAACATTTGAAGACAGCTACATTTCCTTGGAATCTTCTTTCTGACAGACTTATTCCTTCCATTTCCCTCCCATACCATATCCTGAAGGATTCCTCATTATCTCTTTCATGGCTTTCAGCATCCTGACTATTCCTATCTAGACCAGTGCATCTCAATTTTGGTCGCACATTAGAATTACCTTCTTAAAAATCCCAGAGCCCAGGCCCCACCCTGAATTAGCTAAACAAAAATCTCTGGGGAGACAATTGTGAACAAAAGTTCCTTCAAGGGAAATGTGGACAAAAGACACTTTATTCCAGTGAACAGTTTACACACTAGGGAGACACAGCTTTCACATAAAATGAAGATGCATTTCAGAGAAACAAAGGAGAATCTGGATTTTATAGCAAATGTGTCCATAAAGGTTCCCAATCAAGTCTGTTTATGCAAATGAAGGATTCAAACTTGCTTAGTTCTAATTGGTAAACATAGCTAAGCTCTGATTGGATGGAGCAGGTAAGCTCTGATTGATTCCAAAATCAGAAGTCTCTGTCAGATGTTTCTTTGAAACAGCTAGTGGAGGTGAGAGAGGTCCCATCCCAGCTATAGCCACGTGGTTCTATTTTAACTCAGCCACAGGGAGTCCATTTTGTCTATTGGCTGGGACATATAGGGCGTTCTTTGACAGAATCAAGGCATCAGTATTTTAAAATCACAAATAATTCTAATGTGCAGCCAAGGTTGAAACTGCTGTTCTAGATGTGCCTTAGTTTACAAATTCTGCTTTAAAAATCTGGCATTCTAAATTGCTATGGCAATGTATTTTAGGACTTTCTACTCCAGAAACCTTAGCATGCATTTAGAAATAAAAATTACATTTCTTTTAGTAGAATTCAAGTAAGAAACAAATGTTTGATAAAAAGGAATCCTTCCAAATCTTGCTTTTTAAATTGTAATCTTCCTCACCATTCTTTATCCAACTTTTTTTACCCCTATATCCACTTTCTCTGGGGGATCTCATCTGCTCCTGTGAATTCAGGTACCTTCTATCAACAAACTTCTGAAATCCAAACTCTCATATCCAATCTATATATCGTGTTAAAGGGTAACTTTCAAAAAAGAGTAAGATTGTGACTCTCAAACAGATAAAAATTGTATTACCTTGTTTGCACATTGATGTAAAGAAATAACTGTGACTAGGCAATTTAAAGAGACAAGAGGTTTAATTGGTTCATAGTTCCACAGGCTGTACAGGAAGCATGGCTAGGGAGGCCTCAGGA	CGGCCT	20	PASS	ClusterIDs=HG2_PB_pbsv_6934:HG4_PB_pbsv_6938:HG2_Ill_tnscope_816:HG3_PB_assemblyticsfalcon_23002:HG3_PB_SVrefine2Falcon1Dovetail_4182:HG2_PB_assemblyticsPBcR_22336:HG2_PB_SVrefine2PBcRplusDovetail_9534:HG2_PB_SVrefine2PB10Xhap12_5067:HG2_Ill_SVrefine2DISCOVARplusDovetail_11181:HG2_10X_SVrefine210Xhap12_4963:HG2_PB_HySA_12817:HG2_Ill_MetaSV_4353:HG2_10X_allpass_1170:HG4_Ill_Krunchall_10298:HG2_Ill_Krunchall_9978:HG4_Ill_MetaSV_4528;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4963:HG2_Ill_SVrefine2DISCOVARplusDovetail_11181:HG2_PB_SVrefine2PB10Xhap12_5067:HG2_PB_SVrefine2PBcRplusDovetail_9534:HG2_PB_assemblyticsPBcR_22336:HG3_PB_SVrefine2Falcon1Dovetail_4182:HG3_PB_assemblyticsfalcon_23002;NumExactMatchSVs=7;ClusterMaxShiftDist=0.121763;ClusterMaxSizeDiff=0.121763;ClusterMaxEditDist=0.121763;PBcalls=8;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-1345;DistBack=-958;DistForward=-393;DistMin=-958;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:63597635-63598985;PctSeqSimilarity=0.9646;PctSizeSimilarity=0.9993;PctRecOverlap=0.9963;SizeDiff=-1;StartDistance=1;EndDistance=5;GTMatch=0;TruScore=98;MatchId=3410.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:45:0|1:42:0:0:32:./.:0:0:0:0:0/1:45:16:0/1:106:51:1245:.:.
chr6	64667007	HG4_Ill_GATKHCSBGrefine_4897	ATGAAGCTTATGTAAGACAATATTTTTTTGAAAGACACATTACTGTCTTCTTGTACTTAGGAACACTAGATAACACTTCCACACTACATTTATGGGCTATTTTAAACAGTGAAATTACCAACAAAAAACAGAAAATGTAAAAAAATGTGGCTTCACTGAACAGACCTCAAAAAGGACACTTGTTTATGTGCAAGAGCTGGAACAACAAGGCAGAGTGCAACCTTGTTTGGCCTCAGCTCAGAGCTTGCTTCTCAAGTGACTTAAAATGTTGTCTCTGTGCATATCTGTGAATGACCTCAAATGATTGCCAAAATGCTACCAGTATTGATTTTGGGGTTACAAATACATTTTAGTAGGTAAATTTTTAAATAGGAATTCACAAATATTGTAGAGTAATTGTATTCTTCTATTAAATAATAAAAGCTCAATAACTGTTTGTTGACAGAATGAAGCTTGCCTGCTATGCTGAAAGCTATTTCTCGTATTCAGTGAATTAAATTCTTTATTCAAACTATAAATCTGAAAAATCATTTATGCTACAGCGCCTAAAAGTTAAAGAAAAATCCTGTTTGGATACCATGTATATTAGGTTCTAACTTACAATATTCTTAAGTACTTTCTCCACTCTAGAGTACTGCTCTCTCTGATGCCAAAATTCCTGAGCTATCAACAAAATAAATGTATGAAAGCTAGACTTGACACTCAAACATTTTATCAAAAAGTTCTGTTTTTAGTAAAGAAACAAGGTCAGTTGAAGGCCATCATATTGACAACATACATTTTCTGTAAAATCTGATTATGACAGACAAACAATTTAGTGCAACTTACTGAGAGGCATAAATTTGGGTTGATTTTTAATTAGCAAAGACTTTGAATTGACCCATATTTATCCTCTTTCTTGTTTCTCCTTAATTCAAGAACAAGAATTTTCAAGACGTTTATAGATAGATGTTTATATAATCTATGACCATGGTTAATAGTCAAGCTAATGTGCTAATGTGGGGAGTCAAATCTGTGGTCACAATCAACTAATATAATTCATTTTGAGTGAACAAATATTTATTGAGAGTGTTCCAGACCTATGTTAGGTGTTGGAAATAAATTATGAATGGAACAGCTATGGTTCCATACCAATTAAGCTATCAGTCTACCTGAACAGATATATACTCTACAAGTGACAAAAGAGAAAAAATAATATAAATACAGATTATGAAATAAACTATAGAGGAAGAAAATCTGGCAATGGAAGAGAATAATGGTCATAGTGGAGGAGGAAGGAGGCCTATGTTACACGAGGTTTGCTATGGTTTGAATGTTTGTGGCCCCCACAATGTTCATGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4967:HG2_PB_pbsv_6938:HG4_Ill_Krunchall_10309:HG3_Ill_Krunchall_9754:HG4_PB_assemblyticsfalcon_22538:HG3_PB_assemblyticsfalcon_23015:HG2_PB_assemblyticsfalcon_23127:HG2_PB_assemblyticsPBcR_22348:HG2_PB_PB10Xdip_25880:HG2_10X_allpass_1171:HG2_Ill_tnscope_817:HG4_PB_pbsv_6943:HG4_PB_SVrefine2PBcRDovetail_3425:HG4_PB_SVrefine2Falcon1Dovetail_4190:HG4_Ill_MetaSV_4530:HG4_Ill_GATKHCSBGrefine_4897:HG4_10X_allpass_1377:HG3_PB_pbsv_6739:HG3_PB_SVrefine2PBcRDovetail_3187:HG3_PB_SVrefine2Falcon1Dovetail_4185:HG3_Ill_SVrefine2DISCOVARDovetail_5246:HG3_Ill_MetaSV_4534:HG3_Ill_GATKHCSBGrefine_4782:HG3_10X_allpass_1434:HG2_PB_SVrefine2PBcRplusDovetail_9538:HG2_PB_SVrefine2PB10Xhap12_5072:HG2_PB_SVrefine2Falcon1plusDovetail_10254:HG2_Ill_breakscan11_1017:HG2_Ill_SpiralSDKrefine_14730:HG2_Ill_MetaSV_4354:HG2_Ill_GATKHCSBGrefine_4844;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4967:HG4_PB_pbsv_6943:HG4_PB_SVrefine2PBcRDovetail_3425:HG4_PB_SVrefine2Falcon1Dovetail_4190:HG4_Ill_MetaSV_4530:HG4_Ill_GATKHCSBGrefine_4897:HG4_10X_allpass_1377:HG3_PB_pbsv_6739:HG3_PB_SVrefine2PBcRDovetail_3187:HG3_PB_SVrefine2Falcon1Dovetail_4185:HG3_Ill_SVrefine2DISCOVARDovetail_5246:HG3_Ill_MetaSV_4534:HG3_Ill_GATKHCSBGrefine_4782:HG3_10X_allpass_1434:HG2_PB_SVrefine2PBcRplusDovetail_9538:HG2_PB_SVrefine2PB10Xhap12_5072:HG2_PB_SVrefine2Falcon1plusDovetail_10254:HG2_Ill_breakscan11_1017:HG2_Ill_SpiralSDKrefine_14730:HG2_Ill_MetaSV_4354:HG2_Ill_GATKHCSBGrefine_4844;NumExactMatchSVs=21;ClusterMaxShiftDist=0.109148;ClusterMaxSizeDiff=0.109148;ClusterMaxEditDist=0.109148;PBcalls=15;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1339;DistBack=19742;DistForward=-1336;DistMin=-1336;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=6:64667008-64668355;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3411.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:49:0|1:24:0:2:34:./.:0:0:0:0:0/1:56:10:0/1:112:47:1305:.:.
chr6	65006421	HG2_Ill_SVrefine2DISCOVARplusDovetail_11189	ATTGTACTGGCAGAATATATATATATATATATATATATATATATATATATATATATACATATATATATATATTTTTTTTTTTTTTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_501:HG3_PB_HySA_10654:HG4_PB_pbsv_6945:HG4_Ill_svaba_9046:HG4_Ill_manta_1730:HG4_Ill_Krunchall_10311:HG4_Ill_GATKHC_11648:HG4_Ill_GATKHCSBGrefine_4899:HG4_Ill_250bpfermikitraw_9722:HG4_Ill_150bpfermikitraw_9316:HG4_CG_vcfBeta_4595:HG4_10X_allpass_1378:HG3_Ill_svaba_9047:HG3_Ill_scalpel_6981:HG3_Ill_SVrefine2DISCOVARDovetail_5249:HG3_Ill_Krunchall_9756:HG3_Ill_GATKHC_11560:HG3_Ill_GATKHCSBGrefine_4783:HG3_Ill_250bpfermikitraw_9399:HG3_Ill_150bpfermikitraw_9170:HG3_CG_vcfBeta_3932:HG3_10X_allpass_1435:HG2_PB_pbsv_6942:HG2_Ill_svaba_8962:HG2_Ill_manta_1992:HG2_Ill_SpiralSDKrefine_14733:HG2_Ill_SVrefine2DISCOVARplusDovetail_11189:HG2_Ill_Krunchall_9994:HG2_Ill_GATKHC_11595:HG2_Ill_GATKHCSBGrefine_4845:HG2_Ill_250bpfermikitraw_9704:HG2_Ill_150bpfermikitraw_9113:HG2_CG_vcfBeta_4117:HG2_10X_allpass_1172:HG2_10X_SVrefine210Xhap12_4970:HG3_PB_pbsv_6743;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4970:HG2_10X_allpass_1172:HG2_CG_vcfBeta_4117:HG2_Ill_150bpfermikitraw_9113:HG2_Ill_250bpfermikitraw_9704:HG2_Ill_GATKHCSBGrefine_4845:HG2_Ill_GATKHC_11595:HG2_Ill_Krunchall_9994:HG2_Ill_SVrefine2DISCOVARplusDovetail_11189:HG2_Ill_SpiralSDKrefine_14733:HG2_Ill_manta_1992:HG2_Ill_svaba_8962:HG2_PB_pbsv_6942:HG3_10X_allpass_1435:HG3_CG_vcfBeta_3932:HG3_Ill_150bpfermikitraw_9170:HG3_Ill_250bpfermikitraw_9399:HG3_Ill_GATKHCSBGrefine_4783:HG3_Ill_GATKHC_11560:HG3_Ill_Krunchall_9756:HG3_Ill_SVrefine2DISCOVARDovetail_5249:HG3_Ill_scalpel_6981:HG3_Ill_svaba_9047:HG4_10X_allpass_1378:HG4_CG_vcfBeta_4595:HG4_Ill_150bpfermikitraw_9316:HG4_Ill_250bpfermikitraw_9722:HG4_Ill_GATKHCSBGrefine_4899:HG4_Ill_GATKHC_11648:HG4_Ill_Krunchall_10311:HG4_Ill_manta_1730:HG4_Ill_svaba_9046:HG4_PB_pbsv_6945;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0210526;ClusterMaxSizeDiff=0.0210526;ClusterMaxEditDist=0.0210526;PBcalls=4;Illcalls=25;TenXcalls=4;CGcalls=3;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=4;CGexactcalls=3;HG2count=14;HG3count=12;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-94;DistBack=-16456;DistForward=7883;DistMin=-16456;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=6:65006422-65006518;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:17:0|1:31:0:2:12:./.:0:0:0:0:0/1:16:20:./.:.:.:.:6692:.
chr6	65014399	HG4_PB_SVrefine2PBcRDovetail_3427	TTTTCCAGGATAGACTATATGTTAGGCCACAAATTAAATCTCAATAGATGGAAGGACATATGTCATATAAATTATCTTTTCTGATCACAATGG	T	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_4846:HG4_PB_pbsv_6946:HG2_PB_pbsv_6943:HG4_PB_SVrefine2PBcRDovetail_3427:HG4_Ill_SVrefine2DISCOVARDovetail_5132:HG4_Ill_GATKHCSBGrefine_4900:HG4_Ill_250bpfermikitraw_9723:HG4_Ill_150bpfermikitraw_9317:HG3_PB_SVrefine2Falcon1Dovetail_4188:HG3_Ill_GATKHCSBGrefine_4784:HG3_10X_allpass_1436:HG2_Ill_manta_1993;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_4846:HG4_PB_SVrefine2PBcRDovetail_3427:HG4_Ill_SVrefine2DISCOVARDovetail_5132:HG4_Ill_GATKHCSBGrefine_4900:HG4_Ill_250bpfermikitraw_9723:HG4_Ill_150bpfermikitraw_9317:HG3_PB_SVrefine2Falcon1Dovetail_4188:HG3_Ill_GATKHCSBGrefine_4784:HG3_10X_allpass_1436:HG2_Ill_manta_1993;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0217391;ClusterMaxSizeDiff=0.0217391;ClusterMaxEditDist=0.0327869;PBcalls=4;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-92;DistBack=7883;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=94;REFWIDENED=6:65014400-65014585;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3413.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:29:0|1:35:8:3:20:./.:0:0:0:0:0/1:29:24:./.:.:.:.:.:.
chr6	65185152	HG2_Ill_GATKHCSBGrefine_4848	TGAAAAGAAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4971:HG2_PB_assemblyticsfalcon_23135:HG2_PB_assemblyticsPBcR_22356:HG2_PB_SVrefine2PB10Xhap12_5076:HG2_PB_PB10Xdip_25884:HG2_PB_PB10Xdip_25885:HG3_PB_pbsv_6745:HG2_Ill_Krunchall_9998:HG2_PB_HySA_12835:HG2_Ill_Spiral_502:HG3_Ill_MetaSV_4535:HG2_Ill_tnscope_818:HG2_Ill_MetaSV_4355:HG3_PB_HySA_10657:HG3_Ill_Krunchall_9759:HG3_Ill_GATKHCSBGrefine_4786:HG3_10X_allpass_1437:HG2_PB_pbsv_6946:HG2_Ill_manta_1994:HG2_Ill_breakscan11_1018:HG2_Ill_Krunchall_9997:HG2_Ill_GATKHCSBGrefine_4848:HG2_10X_allpass_1173:HG2_PB_SVrefine2PBcRplusDovetail_9541:HG2_PB_SVrefine2PB10Xhap12_5075:HG2_PB_SVrefine2Falcon1plusDovetail_10257;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_1173:HG2_Ill_GATKHCSBGrefine_4848:HG2_Ill_Krunchall_9997:HG2_Ill_breakscan11_1018:HG2_Ill_manta_1994:HG2_PB_pbsv_6946:HG3_10X_allpass_1437:HG3_Ill_GATKHCSBGrefine_4786:HG3_Ill_Krunchall_9759:HG3_PB_HySA_10657;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0878049;ClusterMaxSizeDiff=0.0878049;ClusterMaxEditDist=0.0878049;PBcalls=12;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=20;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=32371;DistForward=55975;DistMin=32371;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:65185149-65185476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3414.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:53:0|1:29:3:1:43:./.:0:0:0:0:0/1:31:21:0/1:31:6:.:.:.
chr6	65346305	HG2_PB_SVrefine2Falcon1plusDovetail_10259	GTCCTTACATCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTACATGTTAGACCTGAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGAACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTCATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTGACAAGAAAAAGACAAACAACCCCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAATGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCGAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTAGAGAGGATATGGAGAAATAGGAACACTTCTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTGGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTCTAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTGAGAAAATGTGGCATATATACACCATGGAATACTATGCAGCCATAAAAAATGAAGAGTTCATGTCCTTTGTAGGGACATGGATGAAACTGGAAACCATAATTCTCAGCAAACTATCGCAAGGACAAAAAAACAAACACCACATGTTCTCACTCATAGATGGGAATCGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGTGGGGAGGGGGGAGGGACAGCATTAGGAGATATACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACTAACCTGCACATTGTGCACATGAACCCTAAAACTTAAAGTATAATAATAACAAAATTAAAAAAAAGAGATAACAAGCAAATGGCCAGAACCAACCTGGACAATGAAACTTACCTCAATCTATCACCACGTCTACATTACTCTACAGTGATCAGAAATCTCTTCTCAAGGCAAAATTCTCAATTATTATTGTCAGTGTGGGGAGGGAGCTGGGAGAGGGAGAGCATCAGGAAGAATAGCTGGTGGATGCTGGTCTTAATACCTAGGTCATGGGTTGATCTGTGTAGCAAACCACCATGACACACGTTTACCTTTGTAACAAACCTGCATGTGTACCACACATAAAATAAAAGTTTATGGTAAAAAAGAAAAAAGAAATTTTTTTGTTCTTTTTTTACAGTAGCATGCTATTTCTAGATCACCTTTTAAAAAAAAGAGAATGAATACAACTCCACCAGGCACCCTGATGGACCAAACCCAACACAATTCAAATATACTGAACTTAAGGATACACTGAGCATTTCAGAGCAACCCACTGTCCTGAACTGACAGTTCAAAAATGTATAGGAGTGCATTCTGAGAATACAACTATATGATATTTTAAAAATTCTTTATTTTATGAAAAAACAATTTTAAACACAGGCAGACTACTTTGAACTTTGGATATAAATGTTGGGAAGAATGTAGGACCTTCTGAGGCAGGGACAGAACTAAACTTTAAACAGAACTAGCTTATTCCTGAAAGTGTTTAGTTATAGGTAGATACATTGTTCCTTTCTAAAGAAGCTATGACTAGACTCTCTATTAAATCTAAAATAGTGAGAATATGAATTGTATTTACAATAGAATACAGAAATTAATAAATTAAATGATTATTAAAATACACGCATAATGTTGTAATGATAATTATTAAGAGCTGTGAATTGTCATTCATCTAGTTACCTCCACAACATAAAGCTCCTGTCTTAGTTCAGTCCATCTTTCATTTTCTTTTAATTTTTAACATGTGTCTTTTTCATTATTTGGGAGAGTTCTAGAATGAGCAAGACATCTTGCCTGTGTTCTTTTTAGACTATCTTCACCCTGAGACAACAAAATCCTCCCTGACACATCTATCTCATATATACTTTGTAGTGGGGGGTTTAAAGCCATGGCCTCAAAATATTCAAGTGCAGTCATTTTCAAGCAATTTTCTCTGACTATCTTTTCCTCTGGGTTTTTTGAGGGTGTTAAGAACATGGTGCTGATGTTTCTACTTCCCTACCAAATGCTGTTCTAATGTTACCAGTTACCAACATATTCAAGCCACTCATTTTGTCTTTAACCACTTGATGTGTTTAACAGTTCCTTGGTTGCTTTAGTAAATTCTTTCCTTGTTTACCTCCCTGCCCCCTCTAGTAGATTTTCAGGGTTGCCATAAGAAAGCACCACAGATAAGTGGCTTGAACAACAGAAATTCATTTTCTCACAGTTCTGGAGGCCAGATGTCCAAAATCCATGTGTGGGCAGGATGACAGGATTGGTATCCTCTGAAGCCGTCTCCTTGACTTGTGAGAGACTGTCTCCTCCTTGTGTCTTTGCATGGTCTTCCCTCCATGCATGTTTGTGTCCCCATTTCCTCTTTTTTATAAGGACACCAGCCATGTTAGATTGAGGCCCACCTTCATGACCTCATTTTACCTAACTTACCTTAATTACCTCTTTAAGAGACCTGTCTCCAGTCACAACCTTAAAGCAGGTCTTGGAAAATTACAAAATCAATTTTCAGAAACTTCATGAACATTTATGTTTTCAAGCATGAGTATTATATGTAAATATACATCTCTTTTTTCATCAATTTGTGGCTTTTAAAATCATGCTCAGTTATAAGCATTATACAAATTTTTCCCATTTCTTAATATACAAACCTTGAAACATTCTATAAATTAAAAAGCGTTTTGCAGCTTTTAGTGAAAAGGCATTGCATGGGAGGCCCTTATGCTAAAGATTAAAAT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10259:HG3_Ill_GATKHCSBGrefine_4787:HG2_Ill_MetaSV_4356:HG3_PB_HySA_10658:HG4_Ill_MetaSV_4532:HG2_PB_pbsv_6948:HG3_PB_pbsv_6747:HG4_PB_SVrefine2PBcRDovetail_3429:HG4_PB_SVrefine2Falcon1Dovetail_4194:HG4_Ill_SVrefine2DISCOVARDovetail_5136:HG3_PB_SVrefine2PBcRDovetail_3191:HG3_PB_SVrefine2Falcon1Dovetail_4190:HG3_Ill_SVrefine2DISCOVARDovetail_5253:HG2_PB_SVrefine2PBcRplusDovetail_9543:HG2_PB_SVrefine2PB10Xhap12_5078:HG2_PB_SVrefine2Falcon2Bionano_3484;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10259:HG4_PB_SVrefine2PBcRDovetail_3429:HG4_PB_SVrefine2Falcon1Dovetail_4194:HG4_Ill_SVrefine2DISCOVARDovetail_5136:HG3_PB_SVrefine2PBcRDovetail_3191:HG3_PB_SVrefine2Falcon1Dovetail_4190:HG3_Ill_SVrefine2DISCOVARDovetail_5253:HG2_PB_SVrefine2PBcRplusDovetail_9543:HG2_PB_SVrefine2PB10Xhap12_5078:HG2_PB_SVrefine2Falcon2Bionano_3484;NumExactMatchSVs=10;ClusterMaxShiftDist=0.122559;ClusterMaxSizeDiff=0.122559;ClusterMaxEditDist=0.124887;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-3128;DistBack=-3129;DistForward=-2771;DistMin=-3129;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1195;REFWIDENED=6:65346306-65350628;PctSeqSimilarity=0.9726;PctSizeSimilarity=0.9994;PctRecOverlap=0.9124;SizeDiff=2;StartDistance=-274;EndDistance=-272;GTMatch=0;TruScore=96;MatchId=3415.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:45:35:0|1:40:0:3:34:./.:0:0:0:0:0/0:81:0:0/1:192:87:3255:.:.
chr6	66188859	HG2_PB_SVrefine2PB10Xhap12_5082	GTAAACTCAGAAATTTATCCAACGAAATTATCTAATCTGTAGAATAGTGAGAGGACCACAAATGGTTGAACTAAAATGAATAGAGCCTCAGTGACCAGTAGGAGAATTCTTAATCTACCATACCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4976:HG3_PB_HySA_10669:HG4_PB_pbsv_6955:HG2_PB_pbsv_6954:HG3_PB_assemblyticsfalcon_23034:HG3_PB_SVrefine2Falcon1Dovetail_4195:HG3_PB_pbsv_6755:HG2_PB_HySA_12850:HG3_Ill_MetaSV_4540:HG4_PB_SVrefine2Falcon1Dovetail_4200:HG4_Ill_SVrefine2DISCOVARDovetail_5139:HG4_10X_allpass_1379:HG3_PB_SVrefine2PBcRDovetail_3196:HG3_Ill_SVrefine2DISCOVARDovetail_5259:HG3_Ill_250bpfermikitraw_9422:HG3_Ill_150bpfermikitraw_9195:HG3_10X_allpass_1438:HG2_PB_SVrefine2PBcRplusDovetail_9548:HG2_PB_SVrefine2PB10Xhap12_5082:HG2_PB_SVrefine2Falcon2Bionano_3488:HG2_Ill_SpiralSDKrefine_14743:HG2_Ill_SVrefine2DISCOVARplusDovetail_11199;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4976:HG4_PB_SVrefine2Falcon1Dovetail_4200:HG4_Ill_SVrefine2DISCOVARDovetail_5139:HG4_10X_allpass_1379:HG3_PB_SVrefine2PBcRDovetail_3196:HG3_Ill_SVrefine2DISCOVARDovetail_5259:HG3_Ill_250bpfermikitraw_9422:HG3_Ill_150bpfermikitraw_9195:HG3_10X_allpass_1438:HG2_PB_SVrefine2PBcRplusDovetail_9548:HG2_PB_SVrefine2PB10Xhap12_5082:HG2_PB_SVrefine2Falcon2Bionano_3488:HG2_Ill_SpiralSDKrefine_14743:HG2_Ill_SVrefine2DISCOVARplusDovetail_11199;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.0325203;PBcalls=12;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-124;DistBack=21947;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=122;REFWIDENED=6:66188860-66189105;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:1/1:4:27:1:25:./.:0:0:0:0:1/1:0:27:./.:.:.:.:.:.
chr6	66260027	HG2_PB_SVrefine2Falcon2Bionano_3489	CTACTATATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGATAAGACCATCTTTATTTCCCAGTCTTTGTCTAGGTTTCTACTATTCTATTTTCTCCATGCAACATATCTTTGAACAGCTTAGACTGGTCAGATATCTGCAAGATTGCTTTTTTTTTTTTTTTTTGCTTCTGAGAGTTGTTTTTTATTTATTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGACAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGTCATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGA	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_10012:HG2_10X_allpass_1174:HG3_10X_allpass_1439:HG2_PB_assemblyticsfalcon_23148:HG4_PB_assemblyticsfalcon_22557:HG3_PB_assemblyticsfalcon_23035:HG2_PB_assemblyticsPBcR_22372:HG3_Ill_Krunchall_9778:HG2_Ill_Krunchall_10013:HG4_PB_pbsv_6956:HG3_Ill_MetaSV_4541:HG2_Ill_tnscope_819:HG4_PB_SVrefine2PBcRDovetail_3434:HG4_PB_SVrefine2Falcon1Dovetail_4201:HG4_Ill_SVrefine2DISCOVARDovetail_5141:HG4_Ill_MetaSV_4535:HG4_Ill_GATKHCSBGrefine_4908:HG4_10X_allpass_1380:HG3_PB_pbsv_6756:HG3_PB_SVrefine2PBcRDovetail_3197:HG3_PB_SVrefine2Falcon1Dovetail_4196:HG3_Ill_SVrefine2DISCOVARDovetail_5260:HG3_Ill_GATKHCSBGrefine_4797:HG2_PB_pbsv_6955:HG2_PB_SVrefine2PBcRplusDovetail_9549:HG2_PB_SVrefine2PB10Xhap12_5083:HG2_PB_SVrefine2Falcon2Bionano_3489:HG2_PB_SVrefine2Falcon1plusDovetail_10263:HG2_Ill_breakscan11_1019:HG2_Ill_SVrefine2DISCOVARplusDovetail_11200:HG2_Ill_MetaSV_4360:HG2_Ill_GATKHCSBGrefine_4855:HG2_10X_SVrefine210Xhap12_4977:HG4_Ill_Krunchall_10329;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4977:HG2_Ill_GATKHCSBGrefine_4855:HG2_Ill_MetaSV_4360:HG2_Ill_SVrefine2DISCOVARplusDovetail_11200:HG2_Ill_breakscan11_1019:HG2_PB_SVrefine2Falcon1plusDovetail_10263:HG2_PB_SVrefine2Falcon2Bionano_3489:HG2_PB_SVrefine2PB10Xhap12_5083:HG2_PB_SVrefine2PBcRplusDovetail_9549:HG2_PB_pbsv_6955:HG3_Ill_GATKHCSBGrefine_4797:HG3_Ill_SVrefine2DISCOVARDovetail_5260:HG3_PB_SVrefine2Falcon1Dovetail_4196:HG3_PB_SVrefine2PBcRDovetail_3197:HG3_PB_pbsv_6756:HG4_10X_allpass_1380:HG4_Ill_GATKHCSBGrefine_4908:HG4_Ill_MetaSV_4535:HG4_Ill_SVrefine2DISCOVARDovetail_5141:HG4_PB_SVrefine2Falcon1Dovetail_4201:HG4_PB_SVrefine2PBcRDovetail_3434;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0120573;ClusterMaxSizeDiff=0.0120573;ClusterMaxEditDist=0.041761;PBcalls=15;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1994;DistBack=9046;DistForward=-1983;DistMin=-1983;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:66260028-66262033;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3417.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:68:1/1:1:24:0:20:./.:0:0:0:0:1/1:0:19:1/1:1:123:2327:.:.
chr6	66274841	HG3_Ill_manta_1652	TAAAAAGTGGGTGAACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGTGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_10X_allpass_1381:HG2_10X_allpass_1175:HG4_Ill_Krunchall_10330:HG3_Ill_Krunchall_9779:HG2_PB_assemblyticsfalcon_23149:HG4_PB_assemblyticsfalcon_22558:HG3_PB_assemblyticsfalcon_23036:HG2_PB_assemblyticsPBcR_22373:HG4_PB_HySA_10267:HG3_PB_HySA_10671:HG2_PB_HySA_12851:HG4_Ill_MetaSV_4537:HG3_Ill_MetaSV_4542:HG2_Ill_tnscope_820:HG2_Ill_MetaSV_4361:HG4_PB_pbsv_6957:HG4_PB_SVrefine2PBcRDovetail_3435:HG4_PB_SVrefine2Falcon1Dovetail_4202:HG4_Ill_svaba_9062:HG4_Ill_manta_1732:HG4_Ill_SVrefine2DISCOVARDovetail_5142:HG4_Ill_GATKHCSBGrefine_4909:HG3_PB_pbsv_6757:HG3_PB_SVrefine2PBcRDovetail_3198:HG3_PB_SVrefine2Falcon1Dovetail_4197:HG3_Ill_svaba_9064:HG3_Ill_scalpel_6993:HG3_Ill_manta_1652:HG3_Ill_SVrefine2DISCOVARDovetail_5261:HG3_Ill_GATKHCSBGrefine_4798:HG2_PB_pbsv_6956:HG2_PB_SVrefine2PBcRplusDovetail_9550:HG2_PB_SVrefine2PB10Xhap12_5084:HG2_PB_SVrefine2Falcon2Bionano_3490:HG2_PB_SVrefine2Falcon1plusDovetail_10264:HG2_Ill_svaba_8974:HG2_Ill_manta_1996:HG2_Ill_SVrefine2DISCOVARplusDovetail_11201:HG2_Ill_GATKHCSBGrefine_4856:HG2_10X_SVrefine210Xhap12_4978:HG3_10X_allpass_1440;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4978:HG2_Ill_GATKHCSBGrefine_4856:HG2_Ill_SVrefine2DISCOVARplusDovetail_11201:HG2_Ill_manta_1996:HG2_Ill_svaba_8974:HG2_PB_SVrefine2Falcon1plusDovetail_10264:HG2_PB_SVrefine2Falcon2Bionano_3490:HG2_PB_SVrefine2PB10Xhap12_5084:HG2_PB_SVrefine2PBcRplusDovetail_9550:HG2_PB_pbsv_6956:HG3_Ill_GATKHCSBGrefine_4798:HG3_Ill_SVrefine2DISCOVARDovetail_5261:HG3_Ill_manta_1652:HG3_Ill_scalpel_6993:HG3_Ill_svaba_9064:HG3_PB_SVrefine2Falcon1Dovetail_4197:HG3_PB_SVrefine2PBcRDovetail_3198:HG3_PB_pbsv_6757:HG4_Ill_GATKHCSBGrefine_4909:HG4_Ill_SVrefine2DISCOVARDovetail_5142:HG4_Ill_manta_1732:HG4_Ill_svaba_9062:HG4_PB_SVrefine2Falcon1Dovetail_4202:HG4_PB_SVrefine2PBcRDovetail_3435:HG4_PB_pbsv_6957;NumExactMatchSVs=25;ClusterMaxShiftDist=0.159879;ClusterMaxSizeDiff=0.159879;ClusterMaxEditDist=0.159879;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=-546;DistForward=62909;DistMin=-546;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:66274842-66275179;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3418.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:./.:1:9:0:2:./.:0:0:0:0:1/1:0:28:./.:1:12:2327:.:.
chr6	66644831	HG2_Ill_scalpel_6899	ATTTTTTTCTTTTTTGTGACGCTTACACTAAAGTGATCTTTTTTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10267:HG3_PB_pbsv_6759:HG3_PB_SVrefine2Falcon1Dovetail_4201:HG2_Ill_Spiral_503:HG3_PB_SVrefine2PBcRDovetail_3201:HG3_Ill_scalpel_6995:HG3_Ill_SVrefine2DISCOVARDovetail_5266:HG3_Ill_Krunchall_9782:HG3_Ill_GATKHC_11586:HG3_Ill_GATKHCSBGrefine_4800:HG3_Ill_FB_6292:HG3_Ill_250bpfermikitraw_9426:HG3_Ill_150bpfermikitraw_9201:HG2_PB_pbsv_6958:HG2_Ill_scalpel_6899:HG2_Ill_manta_1997:HG2_Ill_SpiralSDKrefine_14745:HG2_Ill_SVrefine2DISCOVARplusDovetail_11205:HG2_Ill_GATKHC_11611:HG2_Ill_GATKHCSBGrefine_4858:HG2_Ill_FB_6365:HG2_Ill_150bpfermikitraw_9137:HG2_10X_SVrefine210Xhap12_4982:HG2_PB_SVrefine2Falcon2Bionano_3493:HG2_Ill_breakscan11_1020:HG3_Ill_Spiral_7644:HG2_PB_assemblyticsfalcon_23152;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4982:HG2_Ill_150bpfermikitraw_9137:HG2_Ill_FB_6365:HG2_Ill_GATKHCSBGrefine_4858:HG2_Ill_GATKHC_11611:HG2_Ill_SVrefine2DISCOVARplusDovetail_11205:HG2_Ill_SpiralSDKrefine_14745:HG2_Ill_manta_1997:HG2_Ill_scalpel_6899:HG2_PB_pbsv_6958:HG3_Ill_150bpfermikitraw_9201:HG3_Ill_250bpfermikitraw_9426:HG3_Ill_FB_6292:HG3_Ill_GATKHCSBGrefine_4800:HG3_Ill_GATKHC_11586:HG3_Ill_Krunchall_9782:HG3_Ill_SVrefine2DISCOVARDovetail_5266:HG3_Ill_scalpel_6995:HG3_PB_SVrefine2PBcRDovetail_3201;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0943396;ClusterMaxSizeDiff=0.0943396;ClusterMaxEditDist=0.264151;PBcalls=7;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-53;DistBack=13550;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:66644832-66644898;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3419.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:40:0|1:30:0:2:40:./.:0:0:0:0:0/1:8:8:./.:.:.:.:.:.
chr6	68944005	HG2_Ill_SpiralSDKrefine_14761	TTATATATTATATATGTATATATATTATATATTATATATGTATATATATTATATATTATATATGTA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_6982:HG3_Ill_Krunchall_9808:HG3_Ill_GATKHCSBGrefine_4815:HG2_Ill_manta_2010:HG2_Ill_SpiralSDKrefine_14761:HG2_Ill_Krunchall_10051:HG2_Ill_GATKHCSBGrefine_4875:HG2_10X_allpass_1178:HG2_PB_HySA_12888:HG3_PB_pbsv_6786;NumClusterSVs=10;ExactMatchIDs=HG2_10X_allpass_1178:HG2_Ill_GATKHCSBGrefine_4875:HG2_Ill_Krunchall_10051:HG2_Ill_SpiralSDKrefine_14761:HG2_Ill_manta_2010:HG3_Ill_GATKHCSBGrefine_4815:HG3_Ill_Krunchall_9808;NumExactMatchSVs=7;ClusterMaxShiftDist=0.129032;ClusterMaxSizeDiff=0.129032;ClusterMaxEditDist=0.145161;PBcalls=3;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-65;DistBack=30;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=104;REFWIDENED=6:68943970-68944138;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:33:0|1:34:2:1:28:./.:0:0:0:0:0/1:25:29:./.:.:.:.:.:.
chr6	72571428	HG4_Ill_manta_1749	TTTAAGGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4369:HG2_PB_assemblyticsPBcR_22460:HG2_PB_assemblyticsfalcon_23225:HG3_Ill_Krunchall_9841:HG2_Ill_Krunchall_10092:HG4_PB_pbsv_7010:HG3_PB_HySA_10733:HG2_PB_SVrefine2PBcRplusDovetail_9578:HG2_PB_HySA_12946:HG3_PB_pbsv_6802:HG4_PB_assemblyticsfalcon_22629:HG4_PB_SVrefine2Falcon1Dovetail_4227:HG4_Ill_scalpel_6793:HG4_Ill_manta_1749:HG4_Ill_SVrefine2DISCOVARDovetail_5178:HG4_Ill_MetaSV_4552:HG4_Ill_GATKHCSBGrefine_4953:HG4_10X_allpass_1390:HG3_PB_assemblyticsfalcon_23105:HG3_PB_SVrefine2PBcRDovetail_3222:HG3_PB_SVrefine2Falcon1Dovetail_4227:HG3_Ill_scalpel_7047:HG3_Ill_manta_1662:HG3_Ill_SVrefine2DISCOVARDovetail_5301:HG3_Ill_GATKHCSBGrefine_4827:HG3_10X_allpass_1444:HG2_PB_pbsv_7002:HG2_PB_SVrefine2PB10Xhap12_5112:HG2_PB_SVrefine2Falcon1plusDovetail_10291:HG2_Ill_scalpel_6956:HG2_Ill_manta_2016:HG2_Ill_breakscan11_1022:HG2_Ill_SVrefine2DISCOVARplusDovetail_11236:HG2_Ill_GATKHCSBGrefine_4887:HG2_10X_allpass_1181:HG2_10X_SVrefine210Xhap12_5003:HG4_Ill_Spiral_584:HG4_Ill_MetaSV_4551:HG3_Ill_Spiral_7695:HG3_Ill_MetaSV_4552:HG2_Ill_tnscope_823:HG2_Ill_Spiral_504;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5003:HG2_10X_allpass_1181:HG2_Ill_GATKHCSBGrefine_4887:HG2_Ill_SVrefine2DISCOVARplusDovetail_11236:HG2_Ill_breakscan11_1022:HG2_Ill_manta_2016:HG2_Ill_scalpel_6956:HG2_PB_SVrefine2Falcon1plusDovetail_10291:HG2_PB_SVrefine2PB10Xhap12_5112:HG2_PB_pbsv_7002:HG3_10X_allpass_1444:HG3_Ill_GATKHCSBGrefine_4827:HG3_Ill_SVrefine2DISCOVARDovetail_5301:HG3_Ill_manta_1662:HG3_Ill_scalpel_7047:HG3_PB_SVrefine2Falcon1Dovetail_4227:HG3_PB_SVrefine2PBcRDovetail_3222:HG3_PB_assemblyticsfalcon_23105:HG4_10X_allpass_1390:HG4_Ill_GATKHCSBGrefine_4953:HG4_Ill_MetaSV_4552:HG4_Ill_SVrefine2DISCOVARDovetail_5178:HG4_Ill_manta_1749:HG4_Ill_scalpel_6793:HG4_PB_SVrefine2Falcon1Dovetail_4227:HG4_PB_assemblyticsfalcon_22629;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0855784;ClusterMaxSizeDiff=0.0855784;ClusterMaxEditDist=0.0855784;PBcalls=15;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-339;DistForward=-281;DistMin=-339;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:72571429-72571763;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3422.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:45:./.:13:20:18:19:./.:0:0:0:0:0/1:27:25:0/1:31:5:.:.:.
chr6	72585466	HG3_Ill_GATKHCSBGrefine_4828	TTGATTCAAATAAATTTGCTAGGTTAATATTTCTGGTTTTCCTTAACATACCTTTTCATTATATGATACTCTTACTTCA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_23227:HG3_PB_HySA_10734:HG4_PB_pbsv_7011:HG2_PB_pbsv_7004:HG3_PB_pbsv_6804:HG4_PB_assemblyticsfalcon_22631:HG4_PB_SVrefine2PBcRDovetail_3459:HG4_PB_HySA_10346:HG4_Ill_manta_1750:HG4_Ill_GATKHCSBGrefine_4954:HG4_Ill_250bpfermikitraw_9830:HG3_PB_assemblyticsfalcon_23107:HG3_Ill_Krunchall_9842:HG3_Ill_GATKHCSBGrefine_4828:HG3_Ill_250bpfermikitraw_9489:HG3_10X_allpass_1445:HG2_Ill_manta_2017:HG2_Ill_SpiralSDKrefine_14787:HG2_Ill_Krunchall_10093:HG2_Ill_GATKHCSBGrefine_4888:HG2_Ill_250bpfermikitraw_9805:HG4_Ill_Spiral_585:HG3_Ill_Spiral_7696:HG2_Ill_Spiral_505;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9805:HG2_Ill_GATKHCSBGrefine_4888:HG2_Ill_Krunchall_10093:HG2_Ill_SpiralSDKrefine_14787:HG2_Ill_manta_2017:HG3_10X_allpass_1445:HG3_Ill_250bpfermikitraw_9489:HG3_Ill_GATKHCSBGrefine_4828:HG3_Ill_Krunchall_9842:HG3_PB_assemblyticsfalcon_23107:HG4_Ill_250bpfermikitraw_9830:HG4_Ill_GATKHCSBGrefine_4954:HG4_Ill_manta_1750:HG4_PB_HySA_10346:HG4_PB_SVrefine2PBcRDovetail_3459:HG4_PB_assemblyticsfalcon_22631;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0382166;ClusterMaxSizeDiff=0.0382166;ClusterMaxEditDist=0.0387097;PBcalls=9;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-78;DistBack=4974;DistForward=14563;DistMin=4974;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=79;REFWIDENED=6:72585467-72585623;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3423.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:0|1:26:2:0:22:./.:0:0:0:0:0/1:35:25:./.:.:.:.:.:.
chr6	74156152	HG4_Ill_manta_1753	GAAAAAAAAAAATCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCGCCGGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_824:HG4_PB_HySA_10356:HG2_PB_PB10Xdip_25986:HG2_PB_SVrefine2PB10Xhap12_5119:HG4_Ill_MetaSV_4554:HG3_PB_SVrefine2Falcon1Dovetail_4231:HG4_PB_pbsv_7014:HG4_PB_SVrefine2PBcRDovetail_3461:HG4_PB_SVrefine2Falcon1Dovetail_4232:HG4_Ill_scalpel_6804:HG4_Ill_manta_1753:HG4_Ill_SVrefine2DISCOVARDovetail_5185:HG4_Ill_GATKHCSBGrefine_4958:HG4_10X_allpass_1391:HG3_PB_SVrefine2PBcRDovetail_3227:HG3_Ill_scalpel_7056:HG3_Ill_manta_1663:HG3_Ill_SVrefine2DISCOVARDovetail_5311:HG3_Ill_GATKHCSBGrefine_4833:HG2_PB_SVrefine2PBcRplusDovetail_9582:HG2_PB_SVrefine2PB10Xhap12_5118:HG2_PB_SVrefine2Falcon1plusDovetail_10295:HG2_Ill_manta_2020:HG2_Ill_SVrefine2DISCOVARplusDovetail_11241:HG2_Ill_GATKHCSBGrefine_4891:HG2_10X_allpass_1183:HG2_10X_SVrefine210Xhap12_5008:HG2_PB_pbsv_7010:HG2_Ill_breakscan11_1023:HG3_PB_pbsv_6810;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5008:HG2_10X_allpass_1183:HG2_Ill_GATKHCSBGrefine_4891:HG2_Ill_SVrefine2DISCOVARplusDovetail_11241:HG2_Ill_manta_2020:HG2_PB_SVrefine2Falcon1plusDovetail_10295:HG2_PB_SVrefine2PB10Xhap12_5118:HG2_PB_SVrefine2PBcRplusDovetail_9582:HG3_Ill_GATKHCSBGrefine_4833:HG3_Ill_SVrefine2DISCOVARDovetail_5311:HG3_Ill_manta_1663:HG3_Ill_scalpel_7056:HG3_PB_SVrefine2PBcRDovetail_3227:HG4_10X_allpass_1391:HG4_Ill_GATKHCSBGrefine_4958:HG4_Ill_SVrefine2DISCOVARDovetail_5185:HG4_Ill_manta_1753:HG4_Ill_scalpel_6804:HG4_PB_SVrefine2Falcon1Dovetail_4232:HG4_PB_SVrefine2PBcRDovetail_3461:HG4_PB_pbsv_7014;NumExactMatchSVs=21;ClusterMaxShiftDist=0.213816;ClusterMaxSizeDiff=0.213816;ClusterMaxEditDist=0.213816;PBcalls=13;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-326;DistForward=-12;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3215;REFWIDENED=6:74153249-74166222;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3425.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:40:0|1:27:6:1:22:./.:0:0:0:0:0/1:17:19:0/1:28:8:.:.:.
chr6	74421253	HG4_10X_allpass_1392	TTAAGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_6820:HG3_PB_assemblyticsfalcon_23132:HG2_PB_assemblyticsPBcR_22487:HG3_Ill_Krunchall_9867:HG2_Ill_Krunchall_10117:HG3_PB_HySA_10759:HG4_PB_pbsv_7018:HG4_PB_assemblyticsfalcon_22653:HG4_PB_SVrefine2Falcon1Dovetail_4236:HG4_Ill_scalpel_6810:HG4_Ill_MetaSV_4558:HG4_Ill_GATKHCSBGrefine_4961:HG4_10X_allpass_1392:HG3_PB_SVrefine2PBcRDovetail_3231:HG3_PB_SVrefine2Falcon1Dovetail_4237:HG3_Ill_scalpel_7065:HG3_Ill_manta_1664:HG3_Ill_SVrefine2DISCOVARDovetail_5314:HG3_Ill_GATKHCSBGrefine_4836:HG3_10X_allpass_1447:HG2_PB_pbsv_7019:HG2_PB_SVrefine2PBcRplusDovetail_9587:HG2_PB_SVrefine2PB10Xhap12_5125:HG2_PB_SVrefine2Falcon2Bionano_3517:HG2_PB_SVrefine2Falcon1plusDovetail_10301:HG2_Ill_scalpel_6972:HG2_Ill_manta_2021:HG2_Ill_MetaSV_4374:HG2_Ill_GATKHCSBGrefine_4893:HG2_10X_SVrefine210Xhap12_5012:HG4_Ill_MetaSV_4557:HG3_Ill_MetaSV_4561:HG2_Ill_tnscope_825;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5012:HG2_Ill_GATKHCSBGrefine_4893:HG2_Ill_MetaSV_4374:HG2_Ill_manta_2021:HG2_Ill_scalpel_6972:HG2_PB_SVrefine2Falcon1plusDovetail_10301:HG2_PB_SVrefine2Falcon2Bionano_3517:HG2_PB_SVrefine2PB10Xhap12_5125:HG2_PB_SVrefine2PBcRplusDovetail_9587:HG2_PB_pbsv_7019:HG3_10X_allpass_1447:HG3_Ill_GATKHCSBGrefine_4836:HG3_Ill_SVrefine2DISCOVARDovetail_5314:HG3_Ill_manta_1664:HG3_Ill_scalpel_7065:HG3_PB_SVrefine2Falcon1Dovetail_4237:HG3_PB_SVrefine2PBcRDovetail_3231:HG4_10X_allpass_1392:HG4_Ill_GATKHCSBGrefine_4961:HG4_Ill_MetaSV_4558:HG4_Ill_scalpel_6810:HG4_PB_SVrefine2Falcon1Dovetail_4236:HG4_PB_assemblyticsfalcon_22653;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0561056;ClusterMaxSizeDiff=0.0561056;ClusterMaxEditDist=0.0595041;PBcalls=14;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=3543;DistForward=-286;DistMin=-286;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=6:74421254-74421568;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3427.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:39:0|1:33:0:1:37:./.:0:0:0:0:0/1:41:26:0/1:27:8:.:.:.
chr6	74592060	HG2_PB_SVrefine2PBcRplusDovetail_9588	TTTTTCCATATATTATTTTAGTAGAAATGCCACAAATAGCTTTGAAATACTGCAAGTAGCAAACTTGTTTTAAATGCCAGCATGGAAGTTGGACTTGAGGCAAATAGCCTTTCTAGTAGAAATGGGCACCCTGATAACTCCAGGCTTTCATGAGGCACAAAGAACAGGTCATCTTGAGGGTCATTATTGTGAGACATATTCACCAACTGACCCTTTATTTTTAAAAATTTCTTTGTATTATAAGAGTCCAGGTTTACACAGGTGGTGATGTTTCCATTTTAGGAACTCCTTTTAATGTGGAATAACCACGTGGCTGGTCTCTACCACGTGGTTAATGCACATCTTGAGGATTCAGTGATGATTATTTGTGCATTGAGTCTTCCTCATAGACTGTACATTCCTGGAGAGCCTGACCTGTAACTTACATTTCCCATGACTTCCTTATGGCATAACACACAGATGCAGAGCCCTCGTGTGCATGGGTTCATGCCCATCTGCAGTAGGGTTTTCAGTAGACTAGTTTGAAGAGCACCACTGCACACAGGGTTGCTTTGAATGCAGGGCTAGGTTGGTAGTAGAAAGAGGAAGAAGTTGATGGGTGATTTGGGGATATAACCTTAGGCATCAGTGAAGGGAAGAGAGAAAACAGAAGGATGGAAAGAAAGGCTTCAGATTACCAGGATAAATTTTATCTACATTCAAATTTTCCTAGAGGCAGGACTGAAGGTGGAAAGAGTTTGGCTCATGTTCAGTCTTTTGGACAAGAATACTTGGAGAGAAGGACATGTACGCTACTTCACAGGTCAAACCCTACCCTGCCACCTCTGCTCAGGTGTGCTTCCTGCTTTTACCTTGTCATTCAGATCTGGGAACAAATGTCATTTCTCTGACATTTCCCTGTCCACTCAAGCTAAGGTTACCCTGTCTTCTACCTCCCTGAAGTGATCGCTTTTTTGATGCATTGTGGATGTCTTTCTCTATGGTCCTTATCATTAGTTGAAATGTTACTAACTCTTTTATAAACTTGCCAGTTTATTGCTTGTTTTCCCCAGTAGATCATAAGTTCTAACTCTCTCTCTCGATCTCTCTTGTTTGCTCTTAGAACAGTTCCTGGTGCTCAAGAAATGGTGGTTGAATAAATAAACAAGTAAATTACATATAGTCACAATTAACTATAAGGAGACATCTAATTATTTTGTTGACTTGAAATTTTATTATCAAATGTTTCTTTAAATTTCACCACTTATTGGGAGGCTGAGGCGAGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAATTACAAAAATTAGCTGAGTGTGGTGGCATGTGCCTGTAGTCCCAATTACTAGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTCGCAGTGAGTTGAGATTGTGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCACCTCAAAAAAAAAAAAAAATGTTGCACCATTTGGATCAGTGTTGGAACTACTTAAGCACATTTTTTTGTAGGGGAAATGCAACTTGAACTACTATTATTATAGTACCTATTATGTTACCACTACATGGCCACAGAAGATGGTGGTTAGTAGTTAGGATAGAAAAGCAAGCCACTATAACATTGGGGACCAAACAATGGATCAGGTGTAAGGCTCTCTTATCTTAGTTTTATCTCAACTGTCAGATGACAACGTTGGTGTACTGATGTTCTCCAGAGGACACTGTAATTATGTGAGCTTTTTGTAAGAAGAATTAAGAAAAAACAGAGAATCTTAATATGTGCATATAAACTAACATGTTAAAACATTTCTTTAGAAGAAAATAGGACACAGGAAGGGGAACATCACACACTGGGGACTGTTGTGGGGTAGGGGGAGCGGGGAGGGATGGCGCTGGGAGATGTACCTAATGCTAAATGACGAGTTGATGTGTGCAGCACACCAACATGGCACGTGTATACATGTGTGACAAGCCTGCACGTTGTGCACATGTACCCTAAAACTTAAAGTATAATAATAAAAAAATTAAAAAAAAAGAAAATAGGACATCCTTTTAAGCCATTGTGAAGCATGTCAATGAATTAACTGATTATGGTTCAGTCTTGTGGGAAGAGCTTAGAGAAAATATGAGGGAGGAAACAATTTCCAACATTTCATTGTTGAACAGATAGCCGTCTAGTCAATACAGGAATTTTCCTTTAATTTAGACCCTAGTTGATGACATAAATTGGCTAATCCAAGCATACTGAGAAATTTGTAGCCAAACTTGAAGTGTTCTTTTTTAATCATTAGTTTTAATCAGAACTCATGCCCCAACTCAAAGAATAAATTACTGCTGTTTTCCTTTCCAGCTGCAGGCTATTGCTTTTAATTTTATCTGATTGTTATCTTGGCACTAGGTTTGGTATGTGTGCTAACAAAAGCATTTAAAGTAGAAGCTAGTAGAAGGCCAACGGTTCACTTATAGATGCAGGTAATTTGGAATCCTCCCCGTTTCCCTTTTAAAATCCACTACAAATAAATACATAAAATAATGGCAATGCTTAACGAATGGAGAAGCTGAAAAAGGAGTGCCATCGTAGTGAATTGTGACAGCAACATGCTGAATGATGGAGGGTCTCTGAGCAGGTATAACTCACTTTCATTAGATACTAGATCCTTCCTACTTTCTCTTTACCTTATTACATTAACCATTTAAGAAAATGAACTTTCAGCTGGGTGTGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTCGCTTGAGCCCAGGAGTTGGAGACCAGCCTGGGCAACATGCCGAAACACTGTCTCTACAAAAAATACAGAAATTAGCCGGGCGTGGTGGTGCGTGCCTGTAGTGCCAGCTGTTTTGGGGGCTGAGGTGAGCAGATCGCTTGAGCTGGGTAAATTGAGGCTGCAGTGAGCTGAGATTGTGCCACTCTCTCTAGCCTGGGTGACAGGATGAGACTCTGCCTTAAAAAAAGGAAAAAAGGAAGTTAACTTTTGTCTTTTTTATTTTTCTGTTAATGAGTGTTAAGGTAATTTTTTCCAAATAAATGAAAAAAAAAAAAAAAAAAAGCATGTATAGAGCAAATCCCAGGCAGGAAATCTGGATTAGTTAATTACCATTTGTTTCTGCTGTGCTTATTTAAGTAAAGCTATAAATACCGTTGATGGTTTTATAGGGAGACACAAATATGTTCTGATAGCTCAGCAAAATTTCTTGGTTGTGAATTAAAACATGAAGGATTTAATGAGATTTCCTTTAAAAATTTATCTTTGGCCGGCACGGTGGCTCACGCCTCTAATCCCAGCATTTTGGGAGGCTGAGGCTGGCGGATCACGAGGTCAGGAGATGGACATCATCCTGGCTAACACTGTGAAACCCCGTCTCTACTAAAAAAAAATAAAAAATAAAAAATAAATTAGCTGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGTGGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGTGACTTGTGTCTCAAAAAAAAAAATCTTCCAAAATGTGTATATGCTTAATTATCAGAAAAGTAATATAGAGTGGAAAAAATTCTGGACTAGTGGTCAGAACATCTGGGTTCAAGTCCTGGCTCTATCTCTTTTTATAAGCTGTCCTACAGCTTCCTTATTTATAAAATGTTTTGATTTGGACTTCTTTCTGCCGCACAATCCTACAGAATTTAAGATTTATGTAAACATTGTATTGATCTTTGAAAAAATGAATATGAGGAAATCAGAATGAAATTATATGATTTTTAAGACAGTCTTTGATTATTACTAGGATTTCCTAATTCTTGCTTCATCCTCTTTTTGCATGGGAACACAAACTCCCTAAAAGATTTAGGAAAAAATATTTTTCTACCCAGTTGAGGGGTAAAGTTGATTCATCCTGGGAACAGTGCCCCTGGTTGGATACATCATTCAACTAAATATTCCTCCTGTCTTGCCCCCCAGCTGAAAGGCAGGAGAATGAACTAGAAAATCTTGAGATGTGGCTGGATTGGCTGCCCCAAACCTTGGTGTCTTCTGGACTTTCCTGTGTGTCTTGGGGCCTCTGCCCAGGGGCCCAGCTCCTCTGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTATATCTGTGTGTGTATGGAGGGTAGGTGAAAGGGGATGAGGAATTTATTTTTGTCTTCCTGGAAGGATAGATTCTTCTTTTTTGAATTAGCCTCATTAAACTTTTAAGTAATGACTCCTGAAAAAGGACAAAGGGATAAGGCTCTTTTCCAAAGAGTTATCTTTTTGTGCCAGCAATCAGTCATTACTCTCCTACCATGCCATGTGACACAGGATGTGGTCTGATATTTAGTCTAAATACATGCTTCACTTTTTTTCTGCTACAGAGAAGGCAATTATAATGCTCCTTTTGTTATGCAAATAACTTCTCAGAAAAGTGCCCTCTCTCCTCCTTAAAAACTAGATTTACTCAGACTAGGGTGAAAAATAAAAGTCAATCCTGGCATTTAAGTGGTTTCTGGCCCTCAGAAGCCATCTTAGTAGAAGGTGATGAATATGTTTAGTGGCTTCCTACTTCTGGAATATGAGCAGGGTCAGTCTACAGCAGAGTCAGAAGGGCTGTCCCTCCAGGGATCCAGGAAGGCCTGCTAACCTCACTGTATAACCCAGTCTTTTGGGGAACAAAGTTGACACTTCTGAATTGTCCTGTATTTCATTTCTTTGGACCCTACCCCACTAAACTATAATAAAATTGGGGTAAGTGGAATGAATGTAATAAATCAACCTTTTCACTCACATACGTTAGTGTTATATTATTCTTTTATGTAACAAAATGCCTTAAGTTAGTTATTGTATTTATCTAGAATTTTCCATGTGATGGGGAGGTTATTTCTTATACAGGGTCATTTCAAATCAAAGCAATATAGTTGTATGATTTGCCTACACATACGAATAGCTATTGATATTTTCATTAATTTGCTGATGTTCTCCTTAAGTGAATAAAGCATATCATTAAATAAAACTTTTGTGAGGCCTTTAACATTTCTGGAATGCTGGCTTCCCTGCCCCCTATGTTGTTTCAGTTACTTCTGTTGGCTTTAGCTACGTTTATATGTGACATGTGCTTATATTTTCTTTTCTTGCCCTGTTCTTATATAGTTTTGGGGAAAAAAATGGCCTGATTGAACAGGCTTACATTCTTTTACTGTTTTTGTGAATGACTAGTAGTAATATAGAATTTAATGATTCAGTCACACAAAAAACTATTTGGTCTTGTTTTTTCTTTTTCTTTTTCTTTTATGGGGGAAGTGAGATCTTTACCTTTTCAGATTCTTTAGTCCTAATTGGTTTATCTAAGTTTTCTATTTTTTCTTGCATCAATTTTTGCATTTAAAAATTTTCTAGCAATTTAACATTTTCATCTAGATTTCAAAATTATTCACATATAATTATTTATAAAATATTTATTATTTTTTTTTAAATTCTCCAAAAATTTCTATGGTTAGTTTCCATTTTTTCATTCTGCATTTTATTGGTCAATATTATTAGTCTGTTCTAGAATCAGTTTTTGGTTTTATTACTTTTCTCATTATTTAATATTTGGTCTCTATTTTATTTATTTTTCTCACTGCCTTTATTACTTCCTTCCTTCTTATTTAAGTTTATTCCGTAGCCCTTTCCGTAACATCTTGAGTTGAATGACTCATCAATTTATTTTTAAACTTTCTTGTATCTTGACAAATGTAAAGTTAAAATTTCTTTGAGTACTGCTTTAGGTATGTCCAACAAAGGCTGAAAAGCAAAGTTTGTATTACTCGTCAGTTCTGTATATTGCTTCTTTTCCTCTTTAACACACGGACAATTTGGTAACATATATTTCCAAACAGGTGAGATTTTTTTTTAAAGCTCTCTGTTTGTTTGTTAGTAGTAACTAATTTTAATGCATTGGTGCTAGGAGAATGCAGTATATAAACCATTGATACTGTGGAATGCATGGAACCTTCCCTTATAGACAAATACAAGATTTAACTTTTTAAGTGTTATATGGTATGCTTATAAAGATCCAATATTCTCTGTTAGGTGAAAAGTTCTCTATTGTCTAATAGTTGGAGCTTATTGTCTAAATTCTTCAGGTTATTGATATTACTGCATATTTTTTTTTCTGGCTGATATATTAGTCTCTAAGAAGGTATATGAAAATCTATATCTAAAATTGTTGATTTATCTATTTATACTTATTATACACTCTGTCGTTGACTGATACATTTTTCAATTGTTCCTGTTTTTGGTAACATTCTTCTTTATCTCTTATGATTGTTTTTGCCTTGCATTTTTATTTTTCAGAAATTATGATTGCCATCCCATGTTTCTTTTTGTTTAAATTTTTAAATTTATAATGGACACATAATAATTGTACATATTTATGAGGTACAGGGTGTTTTTTCAGTGATTATGTACATAGAATAATGATCAATTTGGGGGTAATTACCATTTCTATCACTCAAAATATTTGTCATTTCTTTGTGGTGACAATATTCAAAATCTTCTCTATCTTGCTAATTTGAAATATATACTACATTGTTTTTTGCTATAGTGACCTTACTGTATATCAGAACACCCAAATGTATTCTTTCTAAATGTAACTTTCTACCCATTGAACAACCTCTGCCAGTTTCCCCCTCTCCCTACCCTTCCCAGCCTCTGATAACCACTATTCTCTCTACTTTTATGAAGTCAACTTATTTAGATTCCACATATGAATAAAATCATACAGTGTTTGCCTTTCTGTGTTTGGGTTATTTTACTTAACACAGTGTGCTCCAGGTTAATCCATGTTGCCACAAATGATAGAATTTCATTCTATTTGATGGGTGAATAGCGTTTCATTAATATATATTGTATTTTCTTCACCCATTAATCTGTAGATGGGAATTTAGGTTAATTCCATGTCTTGGCTATTGTGAATAGTCCTGCAATAAACATAGGTGTGCAGATGTCTCTTTGACTTACTGGTTTAATTTCCTTTCGATGTATACCTAGTAATGGATTGCTAAATCATGTGGTAGTTCTATTTTAAGTTTTTGAGGAGCTTCCATACCATTTTCTATAAGGGCTGTACTAATGTACATTTATTTCCACCAACAGTATATAAGAGTTTCCTTTTCTCGACATCCTCACCAGCATTTGTTATTTTTTGTCTGTTTGATAATAGCCATTCTAACTGGGATGAGGTGATATCTCACTGTATTTTCGATATGCATTACTCTGATGATTAGTGATGCTGAACATTTTTTCATATATCTATTGGCCATATATATGTCTTCAAAGATGTCTATTCAGGTTTTTTACTCATTTTTTTATTTTATTATTTGGTTTCTGCTATTGAGTTGTTTGAGTTCCTTATATATTCTGGATATCAACCCCTTGGCAGATGCGTAGTTTGCAAATACTTTCCCCTATTCTATAGGTTTCCTCTTCACCCTATTGATTGTTTCTTTTGCTGTGTAGGTTTTTATTTTGATATAATCTAATTTGTCTATTTTTGCTCACATTGTGCTTTTCAGATCTTATTCTAAAAAATCTTTGCCAAGTCCAATTTCTTTAAGGATTTCCTCTATGTTTTCTTCTAGTAGTTTCATGTTTTACATTTAAGTTTTTTAATCCATTTACAGTTTATTTTTGTATATGGTGAGAGATAGGGGTTCAGTTTCATTCTTCTGCCTATATATATCCAGTTTTACCAGACTCATTTATTAAAGAGATTGTCCTTTCCCCAATTTATGTTCTTGGTGCCTTTGTTGAAAATTAGTAGGCTTTAAATGAATTAATTTATTTCTGGGTTCTCTATTCTGTTTCATTTTTCTAGTTGGTTTTTATGCCAGTACCATGCTCGTTCAGTTACTCTAGCTTTGTACCATATTTTGAAGTCAATTGGTGATACAGTGTGACTCTGCATCCCCACACAAATCTCATCTCAAATTATAATCTCCACATGTCAGGGGAAGGGCTTGGTGGGAGGTGATTTAATCATGGGGACAGACATTCCCCTTGCTGTTCTCCTGATAGTGAGTGAGTTTTCATGAGAGCTGGTGGTTTGAAAGTGTGTGGCACTACTCCCCTAACTCCTGCTCTGCCATGGTAAGATGATGTATTTTCTTCTCTTTTGCCTTCTGCCATGATTGTGAGTTTCCTGAGGCCTCCCGGTCATGCTTCCTGTTAAGTCTGTAGAACTGTGTGTCAATTAAACCTCTTTTTTTTTCATAAATCACCCAGTCTCAGGTAGTTGTTTATAGCAGGGTGAGAATGGACTAATACAGAAATTGGGGAAATCCAATTTTTGTATTAGTGGGGCATCCCTATAAAGAAAACGTGGAAGCAACTTTGGAACTTGGTAATGGGCAGGGGTTAGAACAGTTTGGAGGGCTCAGAAGAAGACAGGAAGATGTGGGAAAGTTTGGAACTTCCTAAAGACTTGTTGAATGGCTCTGACCAAAATGCTGACAGTGATATGGACAATGAAGTCCAGGCTAGGGTGGTCTCAGATGGAGATGAGGAACTTATTGGGAACTAGAGCAAAGATTATGTGAAAAGACTTGTGGCATTTTTCCCCTGCCCTAGAGATCTGTGGAACTTTGAACTTGAGGGAGATGATTTAGGGTATCTGCTGGAAGAAATTTCTAAGCAGCAAAGTGTGCAAGAGGTGCACTGGCTGCCCCTAACAGCATACATTCATATACGTTCACAAAGAGATGGTGTGAAATTGAAACTTATGTTTTAAAGTGAAGCAGAACATAAAAGTTTGGAAAATTTGTAGCCTGACCATGTGGTAGAAAAGAAAAGATCCATTTTCTGGGGAGGATTCAAGCCAGCTGCAGAAATTTATATAAGTAATGAGGAATCAAATGTTAATAGCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAGAGGCCTTGCTGGCAGCCCCTCTCATAACAGGCCTGGAGGCCTATGAGGAAAAATGGTTTTATGGGCTGGGCCCAGGGCCTTGCTGCTCTGTGCAGCCTTGGAGCATGGCACCCTGCATCCCAGCCACTCCAGCTCCAGCTGTGGCTAAGAGAGACCAAGGTACAGCTTGGGATGTTGCTTCATAGAGTGCAAGCCCCAAGCCTTAGTGGCTTCTACATGGTGTTGTGTGTGTGGGTGCATGCAGAAGACAAGAAGTGAGCTTTGGGAACCTCTGCCTATATTTCAGAGGATGTATGAAAATTCCTGGATGTCCAGGTAGAAGTCCACTGCAGGGGCAGAACCCTCATGGAGAGCCTCTACCATGGGAAATGCAGAGGGGAAATGTGGGGTTGGAGCCCCCACAAAGAGTCCTCACTGGGGCACTGCCTAGTGGAACCGTGAGAAGAGGGCCACCGTCCTCCAGACCCCAGAATGGTAGACCGACCAATGGCTTGCACCGGGCACCTAGAAAAGCCACAGACACTCAATGCCAGCTTGTGAAAGCAGCAACTGGGGCTTTCCCCTGCAGTGCTATAGGGGTAGAGCTGCCCCAGGCCTTGGGAGCCCACCCCTTCCATCAATGTGACATGGATGTGAGACATGTGAGAACATGTCTCATATCCATGGCATCAAAAGAAATTATTTTGAAGTTTTGAGACTTAAAGATTGCCCTCCTGGGTTTCAGACTTGCATGTGGCCCATAGCCCTTTTGTTTTAACAAGTTTATCCCATTTGGAATGGGAGCATTTACCCAATGCCTGTGCCCCCATTGTGTCTTGGAAGTAACTAACTTATTTTCGATCTTACAGGCTCATAGGCAGAAGGGACTTGCCTTGTCTTAGATGAGACTTTGGACTTGAAATTTTGAGTTAATGCTGGAATGAGTTAAGATATCATATGACTATCGGGAAGGCATGATTGGTTTTGAAATGTGAGAAGGACATGAGACTTGGAAGGGGCCAGGGGTGGAATAATATGTTTTGGCTCTGTGTCACCTCCCAAATCTCATCTTAAATTGTAATCCCATGTGTCAGAAGAGGGGCCTGGTGGGAGGTGATTGAATCAGGGTGGGTGGACCTCCCCCTTGCTGTTCTCAAAATAGTGAGTGAGTTCTCATGAGATCTGGTTGTTTGAAAGTATGTGGCACATCCCTTCCTACCACCCCTACTCTGCCATGGTAAATGTGCGTGCTTCCCCTTCACC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_826:HG2_10X_allpass_1184:HG3_10X_allpass_1448:HG3_PB_pbsv_6822:HG3_Ill_Krunchall_9871:HG2_Ill_Krunchall_10121:HG3_Ill_MetaSV_4562:HG2_PB_pbsv_7021:HG2_PB_SVrefine2PBcRplusDovetail_9588:HG2_PB_SVrefine2PB10Xhap12_5127:HG2_PB_SVrefine2Falcon2Bionano_3519:HG2_PB_SVrefine2Falcon1plusDovetail_10303:HG2_Ill_MetaSV_4375:HG2_10X_SVrefine210Xhap12_5013;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5013:HG2_Ill_MetaSV_4375:HG2_PB_SVrefine2Falcon1plusDovetail_10303:HG2_PB_SVrefine2Falcon2Bionano_3519:HG2_PB_SVrefine2PB10Xhap12_5127:HG2_PB_SVrefine2PBcRplusDovetail_9588:HG2_PB_pbsv_7021:HG3_Ill_MetaSV_4562;NumExactMatchSVs=8;ClusterMaxShiftDist=0.000770936;ClusterMaxSizeDiff=0.000770936;ClusterMaxEditDist=0.000770936;PBcalls=6;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-10379;DistBack=42677;DistForward=-10379;DistMin=-10379;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:74592061-74602441;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:66:57:0|1:56:0:0:28:./.:0:0:0:0:0/1:65:19:0/1:446:233:10559:.:.
chr6	74865433	HG2_PB_SVrefine2PB10Xhap12_5129	TGAAAACCAAGTTATTTATTTATTTATTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5014:HG4_10X_allpass_1394:HG4_PB_assemblyticsfalcon_22660:HG2_PB_assemblyticsfalcon_23259:HG2_10X_allpass_1185:HG3_Ill_MetaSV_4563:HG2_Ill_MetaSV_4377:HG2_PB_pbsv_7023:HG4_Ill_MetaSV_4560:HG4_Ill_Krunchall_10441:HG3_Ill_Krunchall_9872:HG2_Ill_Krunchall_10122:HG2_Ill_tnscope_827:HG4_PB_pbsv_7021:HG4_PB_SVrefine2Falcon1Dovetail_4240:HG4_Ill_GATKHCSBGrefine_4963:HG3_PB_pbsv_6824:HG3_PB_assemblyticsfalcon_23136:HG3_PB_SVrefine2PBcRDovetail_3232:HG3_PB_SVrefine2Falcon1Dovetail_4239:HG3_Ill_SVrefine2DISCOVARDovetail_5316:HG3_Ill_GATKHCSBGrefine_4837:HG3_10X_allpass_1449:HG2_PB_assemblyticsPBcR_22490:HG2_PB_SVrefine2PBcRplusDovetail_9590:HG2_PB_SVrefine2PB10Xhap12_5129:HG2_PB_SVrefine2Falcon2Bionano_3520:HG2_PB_SVrefine2Falcon1plusDovetail_10304:HG2_Ill_breakscan11_1024:HG2_Ill_SVrefine2DISCOVARplusDovetail_11244:HG2_Ill_GATKHCSBGrefine_4894;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5014:HG4_PB_pbsv_7021:HG4_PB_SVrefine2Falcon1Dovetail_4240:HG4_Ill_GATKHCSBGrefine_4963:HG3_PB_pbsv_6824:HG3_PB_assemblyticsfalcon_23136:HG3_PB_SVrefine2PBcRDovetail_3232:HG3_PB_SVrefine2Falcon1Dovetail_4239:HG3_Ill_SVrefine2DISCOVARDovetail_5316:HG3_Ill_GATKHCSBGrefine_4837:HG3_10X_allpass_1449:HG2_PB_assemblyticsPBcR_22490:HG2_PB_SVrefine2PBcRplusDovetail_9590:HG2_PB_SVrefine2PB10Xhap12_5129:HG2_PB_SVrefine2Falcon2Bionano_3520:HG2_PB_SVrefine2Falcon1plusDovetail_10304:HG2_Ill_breakscan11_1024:HG2_Ill_SVrefine2DISCOVARplusDovetail_11244:HG2_Ill_GATKHCSBGrefine_4894;NumExactMatchSVs=19;ClusterMaxShiftDist=0.108741;ClusterMaxSizeDiff=0.108741;ClusterMaxEditDist=0.108741;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1151;DistBack=862;DistForward=-1136;DistMin=-1136;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:74865434-74866599;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3429.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:67:1/1:6:34:0:8:./.:0:0:0:0:1/1:0:45:./.:4:74:2086:.:.
chr6	74868416	HG2_Ill_SpiralSDKrefine_14805	TGAAAAGTGAAGGCAAAATTAAGATATTTTCAAGCTTAAAATAAAACTGAGAGAATTAGTCATAGTAGATCTGCACTACAAGAGATGCTAAAGGGTGTTCTTAGGCCTGAAGCAAAATAGAAACTTGGATCTATTGAAAAAATTGAGAAGCACAAGAAATAATAAATATTTGAATAAATGTAAAAAAATTTTGTCTTCTCTTAATTTATTCAAAAGACATACACATATTTAAACTAAAAATTGATATTTATATTTATAGAACATTATACCCAACAGCTTCAGGATACATACTCTTTTAAAGTACATATAAAATGCTCATCAAGACAGATGATCCTTTGTTATACAACAGGTCTCAATATATTATAAAATATTAAATCTTACAGGGAATGTTCTCTGACCACCATGGAATTAAATTAGAAATCAATAACAATGAGAGGTCTAGAAAATTCCAAAATACTTAAAAATTAAACTACATTTCTAATGACCCATGGCAAAATAAAAAAATCACAGGAGATTTCAGGAAATGTTTTGAATTAAATAACAAAAAGACAATATATAAAAATTTGTTGGAATGCATTTAAAGCAGTGATTAGAAGGAAATGTATGACTTTAGATACTTACATCAGAAAATAAAATGGTTCAAACCATTATATGGTTTAAAAATATAAAAGCAAAAGTCAATGAAACAGAAAACATATAAAAGTAGAGAAAATTAACAAAGAAAAAAATGTTGGTTCCTTGAAAATATTAATGAAACTTGATAAACCCTTAGCAAGACTGAGTTATAAAAACTAAAAAGCAAAAAGGAGAGACAGATGTGTGCGCGCACGCGCGCACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGCGCAAGACAAAGAGCTACAGAACTCTGCTGAAATAAATCATAGATGACACAAAAAAATGGAAAAACAATTAGTAATCATGGGTTGCAAGAATCAATATAGTTAAAATTACCACAATGCCCAAAGCAACCCACAAATTCAATGCAATGTCTATTGAATTACCAAAGTCATTTTTCACAGAACTATAAAAAACAATCCTAAAGTTCATAAGAAACCAAAAAAGAGCCCGAATAGTGAACATATTCCTAAGCAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_4561:HG4_PB_SVrefine2PBcRDovetail_3465:HG4_10X_allpass_1395:HG2_10X_allpass_1186:HG2_Ill_tnscope_828:HG4_PB_pbsv_7022:HG4_Ill_SVrefine2DISCOVARDovetail_5187:HG2_PB_pbsv_7024:HG2_PB_SVrefine2PBcRplusDovetail_9591:HG2_PB_SVrefine2PB10Xhap12_5130:HG2_Ill_SpiralSDKrefine_14805:HG2_Ill_SVrefine2DISCOVARplusDovetail_11245:HG2_Ill_MetaSV_4378:HG2_Ill_GATKHCSBGrefine_4895:HG2_10X_SVrefine210Xhap12_5015;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5015:HG2_Ill_GATKHCSBGrefine_4895:HG2_Ill_MetaSV_4378:HG2_Ill_SVrefine2DISCOVARplusDovetail_11245:HG2_Ill_SpiralSDKrefine_14805:HG2_PB_SVrefine2PB10Xhap12_5130:HG2_PB_SVrefine2PBcRplusDovetail_9591:HG2_PB_pbsv_7024:HG4_Ill_SVrefine2DISCOVARDovetail_5187:HG4_PB_pbsv_7022;NumExactMatchSVs=10;ClusterMaxShiftDist=0.140744;ClusterMaxSizeDiff=0.140744;ClusterMaxEditDist=0.140744;PBcalls=5;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1132;DistBack=-1133;DistForward=-1129;DistMin=-1133;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=6:74868417-74869551;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3430.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:18:./.:17:5:5:5:./.:0:0:0:0:0/1:53:11:0/1:87:52:2086:.:.
chr6	75957783	HG4_Ill_GATKHCSBGrefine_4969	TCCACATCCTTTATCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1025:HG4_PB_HySA_10372:HG4_PB_assemblyticsfalcon_22667:HG2_PB_assemblyticsfalcon_23269:HG2_PB_assemblyticsPBcR_22501:HG3_PB_assemblyticsfalcon_23144:HG3_Ill_Krunchall_9881:HG2_Ill_Krunchall_10130:HG4_Ill_Krunchall_10449:HG2_PB_HySA_12993:HG4_PB_pbsv_7026:HG2_PB_pbsv_7029:HG3_PB_pbsv_6829:HG4_Ill_MetaSV_4564:HG3_Ill_MetaSV_4565:HG2_Ill_tnscope_830:HG2_Ill_MetaSV_4380:HG4_PB_SVrefine2PBcRDovetail_3469:HG4_PB_SVrefine2Falcon1Dovetail_4244:HG4_Ill_svaba_9161:HG4_Ill_manta_1755:HG4_Ill_SVrefine2DISCOVARDovetail_5195:HG4_Ill_GATKHCSBGrefine_4969:HG4_10X_allpass_1397:HG3_PB_SVrefine2Falcon1Dovetail_4244:HG3_Ill_svaba_9156:HG3_Ill_scalpel_7073:HG3_Ill_manta_1665:HG3_Ill_SVrefine2DISCOVARDovetail_5323:HG3_Ill_GATKHCSBGrefine_4844:HG3_10X_allpass_1451:HG2_PB_SVrefine2PBcRplusDovetail_9594:HG2_PB_SVrefine2PB10Xhap12_5133:HG2_PB_SVrefine2Falcon2Bionano_3524:HG2_PB_SVrefine2Falcon1plusDovetail_10308:HG2_Ill_svaba_9070:HG2_Ill_scalpel_6982:HG2_Ill_manta_2024:HG2_Ill_SVrefine2DISCOVARplusDovetail_11249:HG2_Ill_GATKHCSBGrefine_4902:HG2_10X_allpass_1188:HG2_10X_SVrefine210Xhap12_5023;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5023:HG2_10X_allpass_1188:HG2_Ill_GATKHCSBGrefine_4902:HG2_Ill_SVrefine2DISCOVARplusDovetail_11249:HG2_Ill_manta_2024:HG2_Ill_scalpel_6982:HG2_Ill_svaba_9070:HG2_PB_SVrefine2Falcon1plusDovetail_10308:HG2_PB_SVrefine2Falcon2Bionano_3524:HG2_PB_SVrefine2PB10Xhap12_5133:HG2_PB_SVrefine2PBcRplusDovetail_9594:HG3_10X_allpass_1451:HG3_Ill_GATKHCSBGrefine_4844:HG3_Ill_SVrefine2DISCOVARDovetail_5323:HG3_Ill_manta_1665:HG3_Ill_scalpel_7073:HG3_Ill_svaba_9156:HG3_PB_SVrefine2Falcon1Dovetail_4244:HG4_10X_allpass_1397:HG4_Ill_GATKHCSBGrefine_4969:HG4_Ill_SVrefine2DISCOVARDovetail_5195:HG4_Ill_manta_1755:HG4_Ill_svaba_9161:HG4_PB_SVrefine2Falcon1Dovetail_4244:HG4_PB_SVrefine2PBcRDovetail_3469;NumExactMatchSVs=25;ClusterMaxShiftDist=0.111288;ClusterMaxSizeDiff=0.111288;ClusterMaxEditDist=0.111288;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=39888;DistForward=58405;DistMin=39888;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:75957784-75958118;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:0:13:0:11:./.:0:0:0:0:1/1:0:45:./.:2:13:.:.:.
chr6	76380607	HG2_Ill_150bpfermikitraw_9248	AAATGAGTTAGAAAACCTTCCAATATGTTATTGTTTATTATCATGCCAGCTTCGTGCATGAAACTTTC	A	20	PASS	ClusterIDs=HG2_PB_HySA_12999:HG4_PB_HySA_10376:HG2_PB_assemblyticsfalcon_23273:HG4_PB_pbsv_7027:HG2_PB_pbsv_7030:HG4_Ill_svaba_9164:HG4_Ill_manta_1756:HG4_Ill_Krunchall_10453:HG4_Ill_GATKHC_11787:HG4_Ill_GATKHCSBGrefine_4971:HG4_Ill_Cortex_3192:HG4_Ill_250bpfermikitraw_9858:HG4_Ill_150bpfermikitraw_9453:HG2_PB_SVrefine2PBcRplusDovetail_9595:HG2_PB_SVrefine2PB10Xhap12_5134:HG2_PB_SVrefine2Falcon2Bionano_3525:HG2_Ill_svaba_9075:HG2_Ill_manta_2025:HG2_Ill_SpiralSDKrefine_14816:HG2_Ill_SVrefine2DISCOVARplusDovetail_11251:HG2_Ill_Krunchall_10137:HG2_Ill_GATKHC_11740:HG2_Ill_GATKHCSBGrefine_4903:HG2_Ill_Cortex_7801:HG2_Ill_250bpfermikitraw_9840:HG2_Ill_150bpfermikitraw_9248:HG2_10X_allpass_1189:HG2_10X_SVrefine210Xhap12_5025;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5025:HG2_10X_allpass_1189:HG2_Ill_150bpfermikitraw_9248:HG2_Ill_250bpfermikitraw_9840:HG2_Ill_Cortex_7801:HG2_Ill_GATKHCSBGrefine_4903:HG2_Ill_GATKHC_11740:HG2_Ill_Krunchall_10137:HG2_Ill_SVrefine2DISCOVARplusDovetail_11251:HG2_Ill_SpiralSDKrefine_14816:HG2_Ill_manta_2025:HG2_Ill_svaba_9075:HG2_PB_SVrefine2Falcon2Bionano_3525:HG2_PB_SVrefine2PB10Xhap12_5134:HG2_PB_SVrefine2PBcRplusDovetail_9595:HG4_Ill_150bpfermikitraw_9453:HG4_Ill_250bpfermikitraw_9858:HG4_Ill_Cortex_3192:HG4_Ill_GATKHCSBGrefine_4971:HG4_Ill_GATKHC_11787:HG4_Ill_Krunchall_10453:HG4_Ill_manta_1756:HG4_Ill_svaba_9164;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0294118;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0298507;PBcalls=8;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-67;DistBack=4707;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=61;REFWIDENED=6:76380608-76380735;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3432.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:64:1|0:8:26:25:2:./.:0:0:0:0:0/1:25:33:./.:.:.:.:.:.
chr6	76746504	HG2_Ill_Cortex_7802	GAGTGGCTATGGTAGATTCTACTAGATACATGAGAAAGATCCAATTCTAGTTTTATTTTAAATATCAATATTTACAACTC	G	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_23152:HG2_PB_HySA_13006:HG4_PB_pbsv_7029:HG4_PB_assemblyticsfalcon_22672:HG4_PB_HySA_10379:HG4_Ill_svaba_9168:HG4_Ill_scalpel_6818:HG4_Ill_manta_1758:HG4_Ill_Krunchall_10458:HG4_Ill_GATKHC_11794:HG4_Ill_GATKHCSBGrefine_4972:HG4_Ill_Cortex_3193:HG4_Ill_250bpfermikitraw_9865:HG4_Ill_150bpfermikitraw_9458:HG4_CG_vcfBeta_4640:HG4_10X_allpass_1398:HG3_PB_pbsv_6831:HG3_Ill_svaba_9164:HG3_Ill_scalpel_7080:HG3_Ill_manta_1666:HG3_Ill_Krunchall_9894:HG3_Ill_GATKHC_11712:HG3_Ill_GATKHCSBGrefine_4848:HG3_Ill_Cortex_3214:HG3_Ill_250bpfermikitraw_9539:HG3_Ill_150bpfermikitraw_9309:HG3_CG_vcfBeta_3968:HG3_10X_allpass_1452:HG2_PB_pbsv_7032:HG2_PB_assemblyticsfalcon_23278:HG2_PB_assemblyticsPBcR_22511:HG2_Ill_svaba_9079:HG2_Ill_scalpel_6989:HG2_Ill_manta_2027:HG2_Ill_SpiralSDKrefine_14820:HG2_Ill_Krunchall_10141:HG2_Ill_GATKHC_11747:HG2_Ill_GATKHCSBGrefine_4906:HG2_Ill_Cortex_7802:HG2_Ill_250bpfermikitraw_9846:HG2_Ill_150bpfermikitraw_9254:HG2_CG_vcfBeta_4161:HG2_10X_allpass_1190;NumClusterSVs=43;ExactMatchIDs=HG2_10X_allpass_1190:HG2_CG_vcfBeta_4161:HG2_Ill_150bpfermikitraw_9254:HG2_Ill_250bpfermikitraw_9846:HG2_Ill_Cortex_7802:HG2_Ill_GATKHCSBGrefine_4906:HG2_Ill_GATKHC_11747:HG2_Ill_Krunchall_10141:HG2_Ill_SpiralSDKrefine_14820:HG2_Ill_manta_2027:HG2_Ill_scalpel_6989:HG2_Ill_svaba_9079:HG2_PB_assemblyticsPBcR_22511:HG2_PB_assemblyticsfalcon_23278:HG2_PB_pbsv_7032:HG3_10X_allpass_1452:HG3_CG_vcfBeta_3968:HG3_Ill_150bpfermikitraw_9309:HG3_Ill_250bpfermikitraw_9539:HG3_Ill_Cortex_3214:HG3_Ill_GATKHCSBGrefine_4848:HG3_Ill_GATKHC_11712:HG3_Ill_Krunchall_9894:HG3_Ill_manta_1666:HG3_Ill_scalpel_7080:HG3_Ill_svaba_9164:HG3_PB_pbsv_6831:HG4_10X_allpass_1398:HG4_CG_vcfBeta_4640:HG4_Ill_150bpfermikitraw_9458:HG4_Ill_250bpfermikitraw_9865:HG4_Ill_Cortex_3193:HG4_Ill_GATKHCSBGrefine_4972:HG4_Ill_GATKHC_11794:HG4_Ill_Krunchall_10458:HG4_Ill_manta_1758:HG4_Ill_scalpel_6818:HG4_Ill_svaba_9168:HG4_PB_HySA_10379:HG4_PB_assemblyticsfalcon_22672;NumExactMatchSVs=40;ClusterMaxShiftDist=0.025;ClusterMaxSizeDiff=0.025;ClusterMaxEditDist=0.0251572;PBcalls=9;Illcalls=28;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=28;TenXexactcalls=3;CGexactcalls=3;HG2count=16;HG3count=13;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-79;DistBack=639;DistForward=111518;DistMin=639;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:76746503-76746585;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3433.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:24:0:16:./.:0:0:0:0:1/1:0:75:./.:.:.:.:.:.
chr6	77097492	HG3_PB_SVrefine2Falcon1Dovetail_4245	ATTATGTTTTGTCTTTTCTTATAATATCAATTTTTACAGGTGTGAGCTGATTTCTCATTGTGGTTTTAATTTGCATTTGCCTCATGTTTAGTGATTTTGAGCCTTTTTAAATTTGCCTTTTGGACATTTGTATGTCTTTTGAGAAATGTCCGTTATTTTCTTGCTTCTGAGTTCTTTTAGTTCCTTATGTATTTTAGATATTCACCCCTTCTCAGATGTACAGTTTGTAAATATTTTCTGTAGGTTGTCTCTTTACCTTGTTTCCTTTGCTGTGCAGGAGCTTTTTAGTATGATGTAATCCAATTAGGGACAAGGAAAAATTTGATGATGCATTTCCTACCCAATGATCACCCTATGTGCTATTTATTTTCTGGGAACAAATTTGTCTGTCAAACCTTACAAACAGCCACTCGAATACCTCTAAAAATCTACCTGTCCTCCGCCCTTACCCAATTTCATGTTTATAATAAATATATTAATAAACAATGGCTTAAATGTTATGCCTATTATTTTGGAATTGTCAAAGATTTATTATTTGGGGATAAGGTTTACTTTGGAATAGATATTTCTATAAAATCAATCACATGTACTGTGACCTGGGAACTTTCACCATTTACCAGACGTTTGTATAGCACATGGAAAGTTCTCTTCAACCATTTATCCCAGCCTTTTCCCACAATATTATGATAGTTTTCTGTAGATGTCTTTATTCTGGGCATTGATAATTATAAATTAAAATTTCATATGAACAATAATGTAAGGCATTAAGACATATTCTACAATATGGAAGAATGAAATGATGTTGAAACAACAAACCAGGAACAATGAAAAAAAAAAGGTGAGCATATAAAACCATGAAAGAAAAATACCCAGGCACCAGAAACAAAGAGAGAACTCTGTTAGAGATGTGCACAAACTTTGGAGATGGATGACTTGCAGGAATATTAGAGTCATTCTTTGTAGATAGTGTCCATAGCCTAAGGAAGACAGGGACTTCAGGGAAAACAACTACTGCTGAAGATGGTGTCTAAAATATGAACCAGATGAGGCTGAATAAGCATTGGAAACATATTAAAGCCTTTGAGTTAATCATGTCACATTCAGAGAAATAAAGACATTGATTCATGAGCAAGAGCATAAATGAATAAAGTACTACATAGAAATTCTAAAATTAAAAAATGCAACCAATGAAATTAAATGGATAGGTTCAAAGTATATTTGATACATATCTGGAAGGGATTAGTTAATTGGAAGGTAAATCTAAGGAAACAGACTAGGCCAGTGCTTCTCTACATGAGGTCTGTGGACAAGTGTAATTCTATCAACTATTATCAGACTGAGAAGAGGTAACTATAGAAATTGATAGTAAGCATTTAGAATATTTTATAACAAGTTGACAAAATAATTTTATATTTTTAATCTAAGAACAAAAAGATTGAGGCTTGTCTTTTGTCTCATTTCATTTTTTCTAGTAACTTATGTTTCTAAAAGTTCCATCTACAGTAGATTGGAAAAAATAAAACTGGTCTTTTACCTTAAATAGTTTAAGAAGAGCTCAACTAAACTATAAGAGATAGAGATAAAGGGGCGGAAGTAATAAAAGAGAAATTTTGGAGGCATAGGGAATTAACAATCGATTAGGCCTTGAATTGGTGATACCCAAGGGACTCATATAATGCCGTTGTAGTAAATGTATCTTCCATATCAGGTGAGGGGGTTATTTTTAATTTTTTGCACCATAATTCATATAAATTAGAATCATTCCAAGGAAAACAGCATGTATGATCACTCTTCTAATGCTCTATTATGATAGTGATATGTTCTAAATGAACAAACAGATAATTACCTTAATACAGAAGGAAAGTGGGAGAAAATTATTTTACACAGTGTAGCCCAAAGCAGCTTCTCTTTTTCCTTTTTCATTCCATTGTCATCTAATTCTAGTGACTTTTACTCAACATCTTATTTATTTATTTATTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCATGCTCTTCTCCTGCCTCAGCCTCCTGAGAAGCTGGGACTACAGGCACCTGCCACCACGCCTGGCTAATTTTTTGTGTTTTTAGTAGAGGCGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATTTCCCAACCTCGTGATTCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTAGAGGCGTGAGCCACCGTGCCCAGCCTCAACATCTTTTATAAAACAACATTTCTGGCATATTTAAAATTGAGGTTAAAAAAGTATTGTATTATTGCAAAAATATCACCCTAAAAATGCTGCCTTATATACATATAGTTTTGCAATTTACAGTTTCCTAATGGTTTTAAATTACATTAACTCCTTAATGCTAAACGTGTAACTTTGAATAATTTTGTAGTATTTCCTTTAAGCTATTAAGAGCTCTATGGACAAAACAATCAGCCAATTCTAGCTTAATGGAATTTTCCATTTTAGTTTTCCTTTGCTCATAAGAGGGACAAAACAATTTATTTCAGATGTATTTAGAGCTATATTCAACCATTCTTATTCTGTTGTTACTGAGAAAAAATAGTGAGTATTCCAATAGAGATGAGAATTGGAGCCTCATAAAAGACAATAATCATCAAATGTATCCAGTGTGTTCCTTCTCTGCACTTGGTGTCCACACTACTGACCACAAAATGGCACAAAGATGGCGGGTTTTGATTCAGGTTCCAAGATGGCCAAATAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACATAGAAGATGGATGATTTCTGCATTTCCAACTGAGGTACTGGGTTCATCTTGCTGGGGACTGTTGGACAGTGGGTGCATCACACCGACCATGAGCCAAAGGAGGGCGAGGCATCGCCTCACCTGGGAAGCACAAGGGGTCAGGGAATTCCCTTTTCTAGCCAAGGAAAGGGGTGACAGATGGCACCTGGAAAATCGGGTCATTCCCACCCTAATATTGCGCTTTTCTGACGGTCTTAGCAAATGGCACACCAAGAGATTATATCCCGTGCCTGGCTCTGAGGGTCCTACACCCACAGAGCCTAGCTCATTGCTAACACAGCAGTCTGAGATCAAACTGCAAGGCAGCAGTGAGGCTGGGGGAGGGGCGCCCGCCATGGCCCAGGCTTGAGTAGGTAAACAAAGTGGCCCAGAAGCTGGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGACTTCACCTCTGGGGCAGGGCATGGCCGAACAAAAGGCAGCAGAAACCTCTGTAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGTGAGTAGTGGTTCTCCCAACATGGAGTTTGAGATCTGAGAACTGAGAGTCTGCCCCCTCAAGTGGGTCCCTGACCCCCAAGTAGCCTAACTGGGAGGCACCCCCAAGTAGGGGCAGACTGACACCTCACACGGCTGCGTACCCCTCTGAGACAAAACTTCCAGAGGAACGATCGGGCAGCAACATTTGCTGTTCACCAATATCCGCTGTTCTGCATCCTCCACTGCTGATACCCAGGCAAACGGTCTGGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGACTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACGCCAAAACCCCATCTGTACGTCACCATCATCAAAGACCAAAGGTATATAAAACTACAAAGATGGAGAAAAAACAGAGTAGAAAAGCTGAAAATTCTAAAAAAGCAGAGCACGTCTCTCTTCCAAAGGAACGCAGCTCCTCACCAGCAACGGAACAAAGCTGGACAGAGAATGACTTTGACGAGTTGAGAGAGGAAGGCTTCAGATGATCAAACTTCTCCAAGCTAAAGAAGGAAGTTCGAACCCATGGCAAAGAAGTTAAAAACCTTGAAAAAAGATTAGACAAATGGCTAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGGACCTGATGGAGCTGAAAACCACTGCATGAGAACTACATGATGAATGCACAAGCCTCAGTAGCTGATCTGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATCAAATGAATGAAATGAAGTGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAACAAAGCCTGCAAGAAATATGGGACTATGTGAAAAGACCAAATCTATGTCTGATTGGCGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGACATTATCCAGGAGAACTTCCCTAATCTAGCAAGGCAGGCCAACATTCAAATGCAGGAAATACAGAGAATGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAACAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGTGGATCTCTCTGCAGAAACTCTACAGGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTGCTGAAGGAAGCACTAAACATGGAAAGGAACAACTGCTACCAGCCACTGCAAAAACATGCCAAATTGTAAAGACCATCAAGGCTAGGAAGAAACTGAATCAACTAATGAGCAAAATAACCAGCTAACATCATAATGGCAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACATGCAGAGACACACATAGGCTCAAAATAAAGGAATGGAGGAAGATCCACCAAGCAAATGGAAAACCTAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAGATGGTGGGTTTTAAATCTAGGAAACATTACCAGGGACAAAGGTTAGACATGGTTCT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1026:HG2_PB_HySA_13009:HG4_PB_assemblyticsfalcon_22676:HG2_PB_assemblyticsfalcon_23282:HG2_PB_assemblyticsPBcR_22515:HG2_10X_allpass_1191:HG4_10X_allpass_1399:HG3_10X_allpass_1453:HG3_Ill_Krunchall_9900:HG2_Ill_tnscope_831:HG4_PB_pbsv_7031:HG4_PB_SVrefine2PBcRDovetail_3471:HG4_PB_SVrefine2Falcon1Dovetail_4245:HG4_Ill_MetaSV_4565:HG3_PB_pbsv_6833:HG3_PB_assemblyticsfalcon_23156:HG3_PB_SVrefine2PBcRDovetail_3235:HG3_PB_SVrefine2Falcon1Dovetail_4245:HG3_Ill_SVrefine2DISCOVARDovetail_5328:HG3_Ill_MetaSV_4566:HG3_Ill_GATKHCSBGrefine_4850:HG2_PB_pbsv_7033:HG2_PB_SVrefine2PBcRplusDovetail_9597:HG2_PB_SVrefine2PB10Xhap12_5136:HG2_PB_SVrefine2Falcon2Bionano_3527:HG2_PB_SVrefine2Falcon1plusDovetail_10309:HG2_Ill_SpiralSDKrefine_14824:HG2_Ill_SVrefine2DISCOVARplusDovetail_11253:HG2_Ill_MetaSV_4381:HG2_Ill_GATKHCSBGrefine_4907:HG2_10X_SVrefine210Xhap12_5027;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5027:HG2_Ill_GATKHCSBGrefine_4907:HG2_Ill_MetaSV_4381:HG2_Ill_SVrefine2DISCOVARplusDovetail_11253:HG2_Ill_SpiralSDKrefine_14824:HG2_PB_SVrefine2Falcon1plusDovetail_10309:HG2_PB_SVrefine2Falcon2Bionano_3527:HG2_PB_SVrefine2PB10Xhap12_5136:HG2_PB_SVrefine2PBcRplusDovetail_9597:HG2_PB_pbsv_7033:HG3_Ill_GATKHCSBGrefine_4850:HG3_Ill_MetaSV_4566:HG3_Ill_SVrefine2DISCOVARDovetail_5328:HG3_PB_SVrefine2Falcon1Dovetail_4245:HG3_PB_SVrefine2PBcRDovetail_3235:HG3_PB_assemblyticsfalcon_23156:HG3_PB_pbsv_6833:HG4_Ill_MetaSV_4565:HG4_PB_SVrefine2Falcon1Dovetail_4245:HG4_PB_SVrefine2PBcRDovetail_3471:HG4_PB_pbsv_7031;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00349515;ClusterMaxSizeDiff=0.00349515;ClusterMaxEditDist=0.00349515;PBcalls=16;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-5149;DistBack=66912;DistForward=9050;DistMin=9050;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=6:77097493-77102645;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3434.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:133:1/1:0:16:1:12:./.:0:0:0:0:1/1:0:24:1/1:2:390:5230:.:.
chr6	77266453	HG2_Ill_GATKHCSBGrefine_4909	CAGTCTGTCTTTTGTCTACTGTGGTTATCTATATAATCTTTCTTTGAGAAGAGTAGTTCTTATTTTTATTTATGTAATCAATCATCAATTGTTA	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_507:HG3_PB_pbsv_6835:HG3_PB_HySA_10784:HG3_PB_SVrefine2Falcon1Dovetail_4247:HG2_PB_HySA_13013:HG2_PB_pbsv_7035:HG2_PB_HySA_13012:HG3_Ill_manta_1668:HG3_Ill_GATKHCSBGrefine_4852:HG3_Ill_250bpfermikitraw_9548:HG2_PB_SVrefine2Falcon1plusDovetail_10311:HG2_Ill_SpiralSDKrefine_14826:HG2_Ill_GATKHCSBGrefine_4909:HG2_Ill_250bpfermikitraw_9853:HG3_Ill_Spiral_7737;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_9853:HG2_Ill_GATKHCSBGrefine_4909:HG2_Ill_SpiralSDKrefine_14826:HG2_PB_SVrefine2Falcon1plusDovetail_10311:HG3_Ill_250bpfermikitraw_9548:HG3_Ill_GATKHCSBGrefine_4852:HG3_Ill_manta_1668;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0212766;ClusterMaxSizeDiff=0.0212766;ClusterMaxEditDist=0.0215054;PBcalls=7;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-93;DistBack=-94;DistForward=20850;DistMin=-94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=94;REFWIDENED=6:77266454-77266640;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3435.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:39:0|1:35:2:0:33:./.:0:0:0:0:0/1:27:28:./.:.:.:.:.:.
chr6	77437124	HG2_PB_SVrefine2PB10Xhap12_5138	TCTTAGTGCAGAGCTGAGTTCAATTCCTGGATATCCTTGTTAACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCATTATTATTGTGTGGGAGTCTAAGTCTCTTTGTAGGTCTCTAAGGACTTGCTTTATGAATCTGGATGCTCCTGTATTGGGCGCATACATATTTAGGATAGTTAGTTCTTCTTGTTGAATTGATCCCTTTACTATTATGTAATGGCCTTCTTTGTCTCTTCTGATCTTTGTTGGTTTAAAGTCTGTTTTATTAGAGACTAGGATTGCAACCCCTGCCATTTTTGGTTTTCCATTTGCTTCATAGATCTTCCTCCATCCCTTTATTTTGAACTTATGTGTGTCTCTGCACGTGAGATGGGTCTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAATTTGCCAGTCTGTGTCTTTTAACTGGAGCATTTAGTCCATTTACATTTAAGGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTATTTTGCTCTTTAGTTGATGCAGTTTCTTCCTAGCATCAATGGTCTTCACAATTTGGCAAGTTTTTGCAGTGGCTGGTACTGGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTGTCAGCTTTTGCTTATCTGTAAAGGATTTTATTTCTCTTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGTCCCCACTCTCTTCTGGCTTGTAGAGTTTCTGCTGAGATATCAGCTGTTAGTCTGATGGGCTTACCTTTGTGGGCAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTTCTTCATTTCAACTTTGGTGAATCTGACAATTTTGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCATTCTCTGTATTTCCTGAATTTGAATGTTGGCCTGCCTTGCTAGGTTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCCCGTCACTTTCAGGTACATCAATCGGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAAGCTTTGTTCGTTTCTTTTTACTCTTTTTTCTCTAAACTTCTCTTCTTGCTTCATTTCATTCATTTGATCTTTAATCACTGATACCCTTTCTTCCAGTTGATTGAATCAGCTATTGAAGCTTGTGCATGTGTCACATAGTTCTTGTGCCATGGTTTTCAGCTCCATCAGGTCATTTAAGGACTTCTCTACACTGATTATTCTAGTTAGCCATTCGTCTAATCTTTTTTCAAGGTTTTTAGCTTCTTTTCGATGGGTTCGAACTTCCTCCTTTAGCTCGGAGAAGTTTGATTTTCTGAAGCCTTCTTCTCTCAACTCATCAAAGTCATTCTCCATCCAGCTTTGTTCTGTTGCTGGCAAGGAGTTGCGTTCCTTTGGAGGGGGAGAGGTGCTATGATTTTTAGAATTTTCAGTTTTTCTGCTCTGTTTTTTTCCTATCTTTGTGGTTTTATCTACCTTTGGTCTTTGTTGATGGTGACGTACAGATGGGGTTTTGGTGTGGTTGTCCTTTCTGTTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGTGTATCAGCAGCGGAAGCTGCAGAACAGCGAATATTGCTGAACAGCAAATGTTGCTGCCTGATTGTTCCTCTGGAAGCTTCATCTCAGAGGAGTACCCAGCCGTGTGAGGTGTCCATCTGCCTCTACTGTGGGATACCTCCCACTTAGGCTACTCGAGGTTCAGGGACCCACTTGAGGAGGCAGTCTGTCCATTCTCAGATCTCAAACTCCATGCTGGAAGAACCACTACTCTCTTCCAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAGGTTTCTGCCACCTTTTGTTTGGCTATGCCCTGCCCCCAGAGGTGGAGTCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGTTTCCACCCAATTTGAAACCTCCAGACTGCTTAGTTTACCTATTCAAGCCTCAGCAATGGCGGGCACCCTCCCCCAGCCTCGCTGCTGCCTTGCAGTTTGATCTCAGAGTGCTGTGCTAGCAATGAGCAAGGCTCCGTGGGTGTGAGACCCTCTGAGCTATGCACAGGATATAATCTCCTGGTGTGCCATTTGCTAAGACCATTGGAAAAGTGCAGTATTAGGGTGGGAGTGACCCAATTTCCCAGGTGCCATCTGTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGTGCTTCCCCGGTGAGGCAATGCCTTGCCCTGCTTCAGCTCATGCTCGGTGGGCTGTACCCATTGTCCTGGCCCCTCTGTCCGAAAAGCCCCAGTGAAATGAACCCAGTACCTCAGTTGGAAATGCAGAAATCACCCATCTTCTGCATTGCTCACGCTGGGAGCTGTAGACTGGAGCTCTTCCTATTTGGCCATCTTGGAACTGCCCCATCTTTTTCATATTCTTACAAAAACACACGTTTTCCAAACTTTGTTCTACATGTCAGCACGAAAGAGGTGAAAGACCAGACTGCAAAGCAGTAAGAGAAGGCATTTATTGGGATTTTAGGAATTGCAATTTTGGAGACACAGATTTGGCCAAAGGTCAAATTGAGTTCCAGAGGGAAGGGTGTAGGGGTTTATGAAAGAATGCTGAGGGTGTTTACATAAGTTATTTTGAAAGAATTATTGTTAATGGAGGTGGCTGTCTTAGTACATGAGTTCACAGTTCACTGGTTGTCACCGTTCAGGAGTTGTAGCACTGGTGAAATTCAGCTGTTTTCCAGGATATTGTGGTCACTGCCGTTTGGCTAAGTTTGAAAGGTTCAAGGCAAGTTCCTATTTTTCTCAGGTTTTTTTTTTTTTTTTTTGGTTGCAGGTTGATATGATTTGGCTCTGTGTCCCACCAAAATCTCATTTTGTAGCTCCCATAATTCCCATATGTTGTGGGAGGGACCTGGTGGGAGATGATTGTATCATGAGAATTGGTCTTTTCCATGCTGTTCTCATGATAGTGAATGGGTCTCATGAGAAGTGACGGTTTAAAAATGGGAGTTTCTCTGCGCAAGCTCTTTTGTTTTTTTGCCTGCCACCATCCACGTAAGATGTTACTTGCTCCTTCTTGCCTTCTGCCATGATTGTGAGGTTTCCCCAGCCACATGGCACTGTGAGTCCAATTAAACCTCTTTCTTTCACAAATTTCCCAGTCTTGGGTATGTCTTTATCAGTAGCATGAAAATGGACTAATACACAGGTTGTGCAAGTAGTTCTTTTTTCACATGGCTTTCTGACTTCATTTTGGAGCTGTGAACCGAAGTGATGTCATTTTGTATATCACATCTCATGTACAAAACACTATTTGGCAAAACTGTAAAGAAGGTTCCATGGAAAAGAGAACTCCATGGCTGTGGTTGGCCTCCCTAAAACGGCCACATCTTTATCTCCCAGAATCTGTGAATATGTTCTTACATGACTGTAGGGACTTTTCACATGTGATTAAAAGATGGGTAAGATTATTGCAGAATATTTTTGTGGGCCCAGTGCAATTTACTAGGGTCCTTATAAGACAGAAACAAAAGGATCTGGGTAAGAGGTATGACAATGAAAGTAGAGGGACAGGAAAGAGATTCGAAGATCCTGCTGGCTTGAAGATGGAGGATGAAGTCATGACTCCAGAAATGCAGAAAGCCTGTGGAAGATAAAAAAGGCTTCTAGATTCTTCCCTAGAACATCCAGAGGGAATGTGGCCCTGACATGAAAAGAGTCCTCTTTTTCATGGAAACTTCTTTACAGTCTTGCCAAATAGTGTTTTGTACATAAGGCGACCCTTTTCAGACTTTGGAACTGTAAAAGAACAAATCCGTATTGCTTCAAGCCACTAAGTCTGCAGTAATTTGTTATAGCAGCAATAGGGAACTAATGCACTGGCCAAATAAATTTCAGAAATGCTACATGCTTTCTTATCTTTTAGAAAATGTACAGAGTATATTAGCATAAAAATATTAATGCTTAATACTAAAACATTTAATAGAATTGCAGTAATTTTCCCCTTGGAAAGGAGCTTTCATGGACAGAGAGCTTTGGTTGTGAATGACCTTAATTACTTGGCTATATTTTTGTTTATAACCTGCTCCACACTCAATGAATCCAAGGTGTTGTAAATTAGAAGACTGAGTTATGAACAGTATCTTGACCATTGTTCTGGAAGGATACAGACTTACTTCATGACTCCTTTATTCAGTTGATGCATTTTAGTTACTGTATTTTCTCTGTGTTTTCTGCTCATACAGAATGGTAGCCCTGTAGATAATAGGTTTATGCTTGTATTAATAATTGTTCGGAATGGCTGCTGGTTTACAGATTAATGTTTTTTGCTAACAAGCTTGAGTAATGTTTAATTTTATGACAGCAGGGGTTTTAAATAATAATGCATCTTTTAAAAAATCACTATGTTCTGAGAAATATTTTATAATGAACTCTATATTTTAGGATGAAACGTTCTGATTCATCAATTATTAGAAACTTTGAGATTTTTTTTTCAGTGCATTATCAATGTAGTTTAGAATAACTGGCTTTTTTTCTTTTTGCATGGGTTTGGCACATGTTGATTAGAGAGAAAACCAACATAAAGGTCAAGTGACTTTTAATTTAATTAATTAATTGATTATTTTTTAAGTGATGGGGATCCACTCAAGTGATCCTCCCACCTGAGCCTCTTGAGTGTCTGGTTCTACCCAAATTCAGTGACACAAACCTGTCAGGTGGCTTTTTAAAATGTTTTTTGGAATAAATTTCTGGGTAGATAAGTATACATACCAGAAATTTAAGTGTATATTACCATAATAATGTCAATAATTAATACCAAAACATCTAATAGAATTGCAATAATTTTCCCCTAGGAAAGCTGCTTTTGAGGACAGAGAGCTTTGGTTTGAATGAACTTAATTACTTATAAAATTACAAGTATAGTAAAATGACTTTTCTATAGTCATTTTAGGGACAGTATAGTATACAGTGCTATATAGCAGAATAGTACAATAAATAGCATCTTTACTTACATTTGCAGTAAAATTTTTGAAATCTCTAAAATCATGCTATGCTATTTTAGCAAAAGCAAAAAAAGTAAAAATATAGAAAAATATAACACAAAAATAAAATCTACCAATAATTAAATAAGGACAGTATAGTATACTGTACTGTCCCTAAAATACATAGTAAAATGACTCACATAGTACAATAAGTTTTGAGATATTAAAATGCATTTTTCCTAATTTGTTGTTGGCTTCCCTTAAGGGACGTACTAGAATTAAATTTGTTTCTCTGGCATTCCAAATATGTCTCACATTGAAGTATCACATTATAGAACTGGAGATAGCACAAAAATAAAGGGGACTTCAATAATGTAGAACAAGTAAGTGCGTATCCTATTTATTTTTAAAAATATTAAATTTCTAATTTAAGCCAGGCATGCAACTAAGTGCTTCCTAGAAATAAATTTTGTCCCTGCTTTCAGTGTGCTTACAATACAATTTTTCAAAATCTCCATTTTTTCCATCTCCTTGACTTACATATAAAACTCAGAGATTTGTGTTAATAAATTTTCACTATTAAAAATGGTGGCTTAGTACAGTATGGAGTTTTTAGTCTTAAAAGGCTTCAGGTGCCCAGGATGATTCTCTTGATCCAGGTCAAGGTTCTAACAGTGATATTAAGTGTGCATTTTGAGATGGATCACCTGACTTTCTCATGTGAAAAACAGAGATAGTAACTACTACCTGTCTGAGAATCTCATGGAAGTGTGATGACCAAAAGAGATGTAATTTATGATAAGCCTTGACTACTGCAAATAGTTGTCCCAGGGAATGGCTTGACTGATGGAAGCACCAATTTATCAATAGCAGTAATTCTCTAAGTGTGGTCATCGGACAGCAATGTCCATATGTCCTAGAACCTTGTTAGAAATGCAAATTATCTACCCTCATTCAAGACTTGTTGAATTAGAACCACTAGGCTTTAATGAGCCCTCCAGGTGATTCTGATACAAGATGAAGTATGATAAGCACAGCTCTAATAGATTGCTAAATGTACTAGTCTCTGCTCTGAGCTCAGAAAATGTTCTGTTAATGATTTTCAACCCAGAAATCTTCAACAGGAGTCTTCATCTTCAAAAGTATCTATGGAGACATTGTCACATGCCAAGAAGTCTACATTTTCATTTTTGATGCTCAAGTTATTTTCTAGCTGTTTTTAGCTCTTAGTTGAGAAAAAGTCCTTATTTAATTATTGGTAGATTTTATTTTTGTGTTATATTTCTCTACATTTTTACTTTTTTTGCTTTTGCGAAAATAGCATAGCATGATTTTAGAGATTTCAAAAGTTTTACTGCAAATGTAAGTAAAGTTGCTATTTATTGAACTATTCTGCTACTATTTTAAACATAGCATCTTATTTAATCATTATTAATTTATTTTACCTGTGACTCAAAGAAATTATATAGTTAGTAAATAGTATACTTAGAATCCAAAGATGGAGCTATTTAATTCCAGGGTAAGAGATTTCATCATTTCTTCATGCTGCCTTCCAAACAGAACAACCTATGGCACGCTTCCCAGTATCCAAAACCAACGCTAATTTTTTATCTTAAACTTTGAACATAAAGTTTCAAGACTATTTTGTAAATAAAGGGTTGAAACAATTTTTCTGATCCAGAATTTTATGAGATATGCTTTGTGATAGTAAAGCTAGAACTTTGGCTAGGAAGAAAAACTTCCCAATTTTTTTTAAGGCAATTTCTCAGGCAGATACAATTCTTGCACCAAATCTTTAGAAGGGAGCTTATAAAATATAACTGCAAACTAAATATATTTACAAATAAATATTCAAAATTCCAAAATTTAAAGATAACAACTAGGAATCAAATTATTTTTATTTTATTATTATTTTTAAAACACAAAACTTTTTATTATGGAAATTTGCAAACATATATAAAAGTAGAGAGAATAGAATAATGAACCCTAAGTTACACATGACCCAGCTTCAACAATTGTCAAAATATGGCCAATTTTGTTCCTTCTGTACTCCCTCATTTCCTCTGGATCTCCACCTATTATTTTAAAGTAAATCCCAATTATCATGTAATTTCCATCTGTAAATATTTCCAAATAGAGACAATAACTCTATTTTTAAAACAGAACCATAATGCCATTATCATATCTTTAAAAATTAACAGTAATTTATCAATTTCTTCTAGATTTTCTAGTTTATTTGTGTAAGGGGTTTATAGTATTCTCGGATCATGGTTTGTATTTCTGTGGGATCGGTGGTGATATTCCCTTTATCATTTTTTATTGCATCTATTTGATTCTTCTCTCTTTTCTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCTCTTCAGAAAACCAGCTCCTGGATTCACTGATTTTTTGAAGGCTTTTTTGTGTCTCTATCTCCTTCAGTTCTGCTCTGATCTTAGTTATTTCTTCCCTTCTGCTAGCTTTTGAATGTGTTTGCTATTGCTTCTCTAGTTCTTTTAATTGTGATGTTACGGTGTCAATTTTAGATCTTTCCTACTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTGTACACACTGCTTTAAATGTATCCCAGAGATTCTGGTATGTTGTGTCTTTGTTTTCATTGGTTTCAAAGGACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGCAGTCCACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCCCTGAATAGACCAATAACAGGCTCTGAAATTGAGGAAATAATTAATAGTCTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTAAAAGGAGGAATTGCTACCATTCTTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACTGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCGTCCCTGGGATATAAGGCTGGTTCAACATACGCAAATCAATAAAGATAATCCATCATATAAACAGAACCAAAGACAAAAACCACGTGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAGCCCTTCATGCTAAAACCTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAACAGCTATTTATGACAGACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTTACAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAATATAGTGTTGGAAGTTCTGGCAAGGACAATCAGGCAGGAGAAAGAAATAAAGGGTACTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGAAATGATTGTATATTTACAAAAACCCATTGTCTCAGCCCAAAATCCCCTTAAGCTGATAAGCAACTTCAGTAAAGTCTCAGCATACAAAATCAACATGCAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAAGCCAATTTACAAGGGATGTGAAGGACTTCTTCAAGGAGAAGTACAAACCACTGCTCAAAGAAATAAAAGAGGACACAAACAAACGTAAGAATATTCCATGCTCATGGATAGGAAGAATCAATATTGTGAAAATGGCCATAGTATCCAAAGTAATTTACCAAAGATTCAATGCCATCCGCATCAAACTACCAATGACTTTCTTCACAGAATTGGAAAAACTACTTTAAAATTCATATGGAACCAAAAAACAGCATGCATTGCCAAGACAATCCTAAGCCAAAAGAACAAAGCTGCAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAGCAGAAATATAGACCAATGGAACAGAACAGAGACCTCGGAAATAATACCACACATCTACAACCATTTGATCTTTGACAAACCTGACAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCGGGACATAGGCAAGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCTAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAGTTTTTGCAATCTACTCATCTGACAAAAGGCTAACATCAGAATCTACAAAGAACTCAAACAAACTTACAAGAAAAATACAAACAACCCCATCAAAAAGTGGGCTAAGGATATGAACAGACACTCCTCAAAAGAAGACATTTATGCAGCCAAAAGACACGTGAAAAAATGCTCATCATTATTGGCCATCGGAGAAATGCAAATCAAAACCACAATGTGATACCATCTCACACCAGTTAGAATGGCGTTCATTAAAAAGTCAGGAAACAACTGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGAATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGGTATAAAGACACATGCACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAAGCAACCCAAATGTCCATCAATGATAGACTGGATTAAGAAAATGTGGCATATATACATGATGGAATACTATGCAGCCATAAAAAAGGATGATTTCATGTCCTTTATAGGGACATGGATGAAGCTGGAAACCATCATTCTGAGCAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGTTGGGAATTGAACAATGAGAACACCTGGACACAGGAAGGGGAACACCACACACTGGGGCCTGTCCTGGGGTCGGGGGATGGGGGAGGGATAGCATTAGGAGATAGACCTAATGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACCATAGAACTTAAAGTATAATTAAAAGAAATTAACAGTAATTTATTACTGTCATCTAATATCCAGCCAATGTTCAATTTTCCCTATTGTCTATACATAGCCATTTTTTCCCCCAGTTGATATGTTTGAATCAAGATCAAAACCAAATCTGTATACCTTAATTTGTTGGTAGGTCTTTTAAGTCTCTTCTAATTTCTAAATTTCTGCTTCCCCCATTCTTCTTACAACTTGATTGTTGTAGAAAATAAGTCCTTTATTTTGTAGAATATCCCAGATTCTGGCTTTGGCTGATTGCATTCTTGTGGCATCATTTAACTTGTTCTTTTCTATACTTCTTTTAAACTGATAGTTGGGTCTAGAGGCTCTATTAGATTAAGTTGATTATTTGGCAAAACTACTTCAAAGGCAACACTGTGAGCTTCCTATTATTAATATATCATATCATAATGAATATACAGTCTGGTTATCTGGTTTTTTTGTGTGTTGTAAGATTGATCTGTGAGTTCAAGTGATATTATCTTCACCCATTTATTATAAATTTGTAAGATTCTGGAGAATATGTTTCTGCAGTTAGGGCTTTCTGAATAAATTTTACAAAAATGTGTTTCCTGGCCTGAGAGCAAGCTTAGAAGGCAATTTATGACTGATCAGATAATGAAAACCTTCCAAAGAGATTGACCTAACTCTGGCAGTAAGAGGCTCAGGGCCTTGTATACATCTCTGAGTTGTCAAACTGGAGACACTGGGCCCATCTTTTTCCTCAGAGGTTTACTTTCATACCAAAGGGTTAGGTTAAGGATCCTTCCATCTGATCTCCAAGGATACTCAGAAGGCGAGGAGGGAGAGTGATGTCTTTGCTTTTTAGAAACAAAAGAAATCCACATTTTGTTGTATGTCACTTATAGAGTGACCCACCACTTGTATAGGGCATTTATTCCATCTGGCACTCACATGGTACTCTGAAGGCAGGCTGGGTGTGGGGACCAATGCTGCAGTGTTACTTCACTTGTTGATCTTTTTGTTGAGTGTAAAAAGAAATCTGCCTCTGATCTTAAAACCTTGTGTGTGTATTCAGAAAACATTAATAGAGATGAATATTAAAAGCCTAACAATCGCAAAGGAAACAATCAACAGATTGAAAAGGGAACCTATGGAACGGGAGAAAATATTTGCAGATGATGTACCTGATAAGAGGTTAACATCTAAAATATATAAGAACTGCAAATAACTTATTAGCAAAGAAAAAAAATCCAAAAATGGGCTAAAGACCTAAACAAATATTTCTTATAAGAAGACATGCAAATGGTCAATGGTTATGTAGAAAAGGTGTTCAATATCACTAATAATCAGGGAAATGCAAATCAAAACCATGGAGATATCACCTCACACCTATCAGAATGCCTACTATCAAAAAGATAAAAGATAAAGTATTGGTAAACTCTTAGAGGAAAGGGAAACCTTGTAAGCTGTTGGTGGGAATGTAAACTGGCGAAGTCACCATGAAAAACACTATGGAAGTTCCTCAAAAAATCAAAAATACCATACTACCATATGGATCCAACAATCCCACTTCTGGGTATATATCCAAAGGAAAGTATTATTATTATTTATTTTATATTTCCATAGATTTTTTGGGAAACAGGTGGCATTTAGTTACATGAATAACTTTTTAGTGATGATTTGTGAGATTTTGGTGCACCCATCACCAGAGCAGTATACACTGAATCCAATTTGTAGTCTTTTATCCTTCATCCTCTTCCCACACTTTCCCCTTGAGTCCCCAAAGTCCATTATGTTGCTTTATGACTTTGCATCCTCATAGCTTAGCTCCCACTTATGAGTGAGAACATACAACGTTTGGTTTTCCATTCCTGAGTAACTTCACTTAGAATAAGTCTCCAATCCCATCCAGGTTGCTGCAAATGCCTTTAATTCATTCTTGTTATGGCTGAGTAGTATTCCATCATATATATATATATATATATATGATGGTATATATATATATATATATATATATATGCACACACCACAGTTTCTTTAACTACTCGTTGATTGATGGGCATTTGGGTTGGTTCCACATTTTTGCAATTGTGAATTGTGCTGCTATAAACATACATGTGTAAGTATCTTTTTTGTATAATGACTTCTTTTCCTCTGGGTAGATACCCAGCAGTGGGATTGCTGGATCAAATGGTAATTCTACTTTTAGTCCCTTAAGGATCCTCCAAACTGTTTTCCACAGTGGCTGCACCAGTTTACATTCCCACCAGCAGTGTAGAAGTGTTCCCCTTTCATCACATCCATGCCAGAGTCTATTATTTTTTAATTTTTTGTTTATTCTGGCTATTTTTGCGGGAGTAAGGTGGTATTGCGTTTTGGTTTTGATTTGCACTTTCCTGATCATCAGTGATGCTGAGCACCTTTTCATATGTTTGTTGGCCATTTGTATATCCTGTTTCGAGAATCATCTATTCATGTCCCTAGCCCACCCTTTGATGTGATTTTTTTCTTGCTGATTTGTGTGAGTTCATTGTAGATTCTGAATATTAATCCTTTGTCAGATGTATACATTTTGAAGATTTTCTTTCACTCTGTTGGTTTACTGTTTACTCTGCTGACTGTTCCTTTTGCCATGCAAAAGCTCTTTAGTTTAATTAAGTCCCACCTATTTATCTTTGTTTTTATTGTATTTGCTTTTGGGTTCTTGGTCATGAAATCCTTGCCTAAGCCCAATGTCTAGAAAGGTTTTTCTGATGTTATCTCCTAGAATTTTTAATAGTTTCAGGTGTTAGATTTAAGTCGTTGATCCATCTTGAGTTTTGTGTACAGTGAGAGATGAGGATGTAGTTTCATTCTCCCACATGTGGCTTGCCAATTATACCAGCACCATTTGTTGAATAGGGTGTCCTTTCCCCACTTTGTTCTTGTTTGCTTTGTCAAAGACCAGTTGGCTGTAAATATTTAGGTTTATTTCTGGGATCTCTATTTTGTTCCACTGGTCTGTGTGCCTGTTTTTATACCAGTACCATGCTGTTTTGGTGACTATAGCCTTATAGTATAGTTTGAAATCAGGTAATGTGATGCCTCCAGATTTGTTCTTTTCACTTAATCTTGCTTTGGCTCTGTGGGCTCTTTTTTTGTTCTATATGAATTTTAGGATTGTCTTTTCTAGTTCTGTGGAGAATGATAGTGGTATTTTTATGAGAATTGCACTGAATTTGTAGATTGCTTTTGGCAGTATGGTCATTTTCACAATATTGATTCTACCCATCTGTGAGCATGGGATGTGTTTCCATTTGTTTGCGTCATTTATGATTTTTTTCAGCAGTGTTTTGTAGTTTTCCTTGTGGAAGTCTTTCACCTCCTTGGTTAGATATATTCCTAAGTATTTTATTTTATTTTTTTTGCAGGTATTGTAAAAGGAGTTGAGTTCTTGATTTGAGTCTCAGCTTGGTCACTGTGGGTGTATAGGAGAGTTACTGATTTGTGTATATTCATTTTGTATTCTGAAACACTGGTGAATTCATTTATCAATTCAAAGAGCTTTTTGGAGGAGTCTTTAGGGTTTTCCAGGTATACAATCACATCATCAGCAAACAGTGACAATCTGACTTCCTCTTTACCGATTTGGACGCTCTTTATTTCTTTCTCTTGTCTGCTCTGGCTAGCACTTCCAGTACTATGTTGAATAGAAGTAGTAAGAGTGGGCATTCTTGTCTCAAGAGTAAATGCTTTCAACTTTTCCCCATTCAATATTATATTGGCTGTAGTTTTGTCATAGATGGCTTTTATTACATTGAGGTATGTCCCTTGTATGCTGATTTTGCGGAGGGTTTTAATTACAAAGGGATGCTGGATTTTGTCAAATGCTTTTTCTGCATCTATTGAAATGACAATGTAATTTTTGTTTTTAATTCTGTTTATATGGTGTATCACATTTATTGACTTGAGTATGTTAAATTATCCCTGCATCTGTGGTATAAAACCCACTTTATCATGGTGGATTATCTTTTTGATATGTTGTTGGATTTGGTTAGCTAATTTTTTAAAGGATTTTTTCATTTATGTATATCAGGGATATTGATCTGTAGTTAAATTCTTTTTTTGTTAGGTTTTTTCGTGGTTTGGGTATTAGGGGATACTGGCTTCATAGGATAATTTAGGGAGGATTCCCTCTTTGCCTATCTTGTGGAATAGTGTCAATAGAATTGATACCAATTCTTGGACTGTCTGGTAGAACTGGTAGAATTCAGCTCTAAATCAGTCTTGTCCTGGACTTTTTTTTGTTGGTGACTTTTTTGTTACCATTTCAATCTCACTGCTTATTATTGGTCTGTTCAGGGTATCTAATTCTTTATTTATGCTAAGAGGGTTGTATCTTTCCAGGAATTTATCCATCTCCTCTAGGTTTTCTAGTTTATGCATGTAAAGGTATTCATAGTAGCTTTGAATAATCTTTTGTATTTCTGGCAGTAAAGTTATTTTAAATAACTAATATGCCATAATCAAGTGAGAATTCAAAAGTTTGACACAAATCTTTTTAACAATTAATCTTATTAATAGTAAAAAGAAAATATAACGTATGTTCTAAATACAGAATGGGGATGAGTGTTTAATAGAACTGAATCTGCCTTTGCAAAAACAATGACAGTGAAAGAAATCTAACATTGATGGCTCCATCTTGTGTCTAACCTCACATGCTAACTGCCTTTGTTAACTACAAAACAAAGATGTAAACAGTCCCTTTCTGAAAATCACCTTCTTTTATTTGAGGGACTGAAACTGTCTTTGTAAGACTAATGAAAGACCAGAAGACTAGGATTATGGGAAAGGCCTAAATTCTAGGATGTAGTTAAACAGCAACCAGCCATTGTTCTCTAGCTTGACTCTCTATAATTCCTTAATGCTTAAGAGTCATGCAGCCAGAAATCACAGGATTTATAACTTCCATAATTCCTCCTATAGATAACAATACATTGTCAAAACACAAGCTTGGTCTTTGAGACATTTTGCAGACTTTCTAATTATGACTGACTCCACCGGGACTAATGACTCATATCAAGGAACTGACTCAACTGGTGACCCCCACCCAGGAACTGACAGCATGCTCAGACAGTATGGACACTCCTGTGATTTCATTGCTAACCAATCAGCAGCACCATTCCTAATTCATGCCTGTCAAATTATCCTTAAAAACCCTGGTTTTCAAGCTCTCAAAGAAGTGGATTTCAGAAATGTCTCCGGTTCTTCCTCTTGGCCATCCCTGTGATAATTAAAGTTTCTTTGCTGCAAACCTGCTGTCCTCAGTGCATTAGCTTTTTCTGGACAGCAGGCAAGAAGAATCCATTGAGCTCTTACAAAATTCAACATTTATTCACAGTTTAAAGAAATCTGTAGAAGAATAATTGCAAAGGAAATACAAATTATGTTATGTCAATAACCAACTCCATGCTTAATCATAATTAATAAAAACTTTCTCACAAATAAACTGTATGTATATATGTCAACATTTTGACAATGCATACAACCCAACTCAACAATTCTACTATGAGATTTCTTCTTAGAAAATTATTAGCTCTCCCCCTCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCACGGTCTCCCTCTCCCTCTCTTTCCACGGTCTCCCTCTCATGCTGAGCCAAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAGCCTCCCTGCCTGATTCTCCTGACTCAGCCTGCCGAGTGCCTGCGATTGCAGGCTCGCGCCGCCATGCCTGACTGGTTTTGGTGGAGACAGGGTTTCGCTGTGTTGGCCAGGCCGGTCTCCAGCCCCTAACCGCAAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCGCTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCACAGTGCTGAGATAGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGTGTCTCCGCCCGGCCGCCATCCCACCTAGGAAGTGAGGAGCACCTCTTCCCGGCCGCCATCACATCTAGGAAGTGAGGAGCATCTCTGCCCGGCCGCCCATCGTCTGAGATATGGGGAGTGACTCTGCCCTGCCGCCCCGTCTGGGATGTGAGGAGCACCTCTGCCCGGCTGCGACCCCGTCTGGGAGGTGAGGAGCATCTCTGCCCGGCCGCCCCGTCTGAGAAGTTAGGAGACCCTCTGCCCGGCAACCGCCCCGTCTGAGAAGTAAGGAGCCCCTCCGCCCGGCAGCCGCCCTGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCAGTCTGGGAAGTGAGGAGCATCTCCGCCTGGCAGCCGCCCCATCTGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCCGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGCATCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCATCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGTGCCTCTACCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCTGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCCTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGCCCGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCTGGCCAGCCGCCCCACCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCTCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCAGCCACCACCCCATCTGGGAGGTGTGCCCAACAGCTCATTGAGAACTGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGTGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAACTTCTTCTGCCATGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCCTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAACACTGCAGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAATTATCAATAAAAAATAAATTAAAAAAAAAAAAGAAAATTATTATATAAGGATGCATGTATAACATATTATTTATAATTGTTAATATAAGGTAATAACATTTCTTTTTATTATTATTTTTATTTTATTTTATTTTATTTTATTTGTTTTTATTTATTTATTTATTTATTTATTTATTATTATTATACTTTAAGTTTTAGCGTACATGTGCACAATGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCGTCCCCCACCCCACAACAGTCCCCAGAGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCATGTCCCTATAAAGGACATGAACTCATCATTTTTTATGGCTGCATAATATTCCATGGTGTATATGTCCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAATATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGCATATACCCAGTAATGGGATGGCTGGGTCAAATGATATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCGTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATCGCCATTCTAACTGGTGTGAGATGGTATCTCATTATGGTTTTGATTTGCATTTCTCTGATGACCAGTGATGGTGAGCATTTTTTCATGTGTCTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGTGAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTTACTCTGATGATAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGGTTAATTAGATCCAATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTCTTTAATCCATCTTGAATTGATTTTTGTGTAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAACACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATACTTGTAGATATGTGGTGTTATATCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTCACTTGGCAATGCAGGCTCTTTGTTGTTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTTGTAGCTTGATGGGGATAGTATTGAATCTGTAAATTACCTTGGGCATTATGGCCATTTTCATGATATTGATTCTTCCTACCCATGAGCATGGAATATCCTTACATTTGTTTGTATCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGAATTCCTAGGTATTTTATTATCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGATTTCGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACAGTCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTTAATACCCTTTATTTCCTTCTCCTGCCTTATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGGTTTTGCCCATTCAGTACGACATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACATCCCATCAATACCTAATTTTTTGAGAGTTTTTAGCATGAAGGGCTGTTGAATTTTGTCAAAGGCCTTTTCTGCATCTATTGAGATAATCATGTGTTTTTTGTCTTTGGTTCTGTTTATATGCTGGATTACATTTATTGATTTGCATATATTGAACCAGCCTTGCACCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGTTTCGGTTTGCCAGTACTTTATTGAGGATTTTTGCATCAATGTTCATTAAGGATATTGGTCTAAAATTCTCTTTTTTTGTTGTGTCTCTGCCAGGCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTCTTCTATTGATTGGAATAGTTTCAGACGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATGTGGTCCTGGACTCTTTTTCGTTGGCAAGCTATTGATTATTGCCACAATTTCAGCTCCTGTTATTGGTCTATTCAGAGATTCAGCTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTTTGTTATATTCTCTGATGGTAGTTTGTATTTCTGTGGGATGGGTGGTGATATCCCCCTTATCATTTTTTACTGCGTCTATTTGATTCTTCTCTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTTGTTAATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTTTTTTAATTGTGATGTTAGGGTGTCAATATTGGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGTGTCCCAGAGATTCTGATATGTTGTGTCTTTGTTCTCATTCGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCTAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGTGGTTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTGCAAGTATGTGGTCACTTTTGGAATAGGTGTGGTGTGGTGCTGCAAAGAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTATG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5029:HG4_PB_pbsv_7033:HG2_10X_allpass_1192:HG4_Ill_MetaSV_4566:HG2_Ill_MetaSV_4382:HG3_PB_SVrefine2Falcon1Dovetail_4248:HG2_PB_pbsv_7036:HG2_PB_SVrefine2PBcRplusDovetail_9599:HG2_PB_SVrefine2PB10Xhap12_5138:HG2_PB_SVrefine2Falcon2Bionano_3529:HG2_PB_SVrefine2Falcon1plusDovetail_10312;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5029:HG3_PB_SVrefine2Falcon1Dovetail_4248:HG2_PB_pbsv_7036:HG2_PB_SVrefine2PBcRplusDovetail_9599:HG2_PB_SVrefine2PB10Xhap12_5138:HG2_PB_SVrefine2Falcon2Bionano_3529:HG2_PB_SVrefine2Falcon1plusDovetail_10312;NumExactMatchSVs=7;ClusterMaxShiftDist=0.000781483;ClusterMaxSizeDiff=0.000781483;ClusterMaxEditDist=0.00289609;PBcalls=7;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-21760;DistBack=149699;DistForward=-9131;DistMin=-9131;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1723;REFWIDENED=6:77437125-77460607;PctSeqSimilarity=0.9565;PctSizeSimilarity=1;PctRecOverlap=0.9953;SizeDiff=-1;StartDistance=-102;EndDistance=-103;GTMatch=0;TruScore=98;MatchId=3436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:77:64:./.:46:9:17:25:./.:0:0:0:0:0/0:77:2:0/1:426:196:21915:.:.
chr6	77920099	HG4_Ill_SVrefine2DISCOVARDovetail_5202	TAAAAATGCTACTGATTTTTGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1027:HG4_Ill_Krunchall_10468:HG3_Ill_Krunchall_9906:HG4_PB_assemblyticsfalcon_22680:HG3_PB_assemblyticsfalcon_23162:HG2_PB_assemblyticsfalcon_23288:HG2_PB_assemblyticsPBcR_22521:HG3_PB_pbsv_6837:HG4_PB_pbsv_7034:HG4_Ill_MetaSV_4567:HG3_Ill_MetaSV_4568:HG2_Ill_tnscope_832:HG4_PB_SVrefine2PBcRDovetail_3472:HG4_PB_SVrefine2Falcon1Dovetail_4246:HG4_PB_HySA_10384:HG4_Ill_scalpel_6826:HG4_Ill_manta_1760:HG4_Ill_SVrefine2DISCOVARDovetail_5202:HG4_Ill_GATKHCSBGrefine_4973:HG4_10X_allpass_1400:HG3_PB_SVrefine2Falcon1Dovetail_4250:HG3_Ill_manta_1669:HG3_Ill_SVrefine2DISCOVARDovetail_5335:HG3_Ill_GATKHCSBGrefine_4855:HG3_10X_allpass_1454:HG2_PB_SVrefine2PBcRplusDovetail_9600:HG2_PB_SVrefine2PB10Xhap12_5140:HG2_PB_SVrefine2Falcon2Bionano_3531:HG2_PB_SVrefine2Falcon1plusDovetail_10314:HG2_PB_HySA_13016:HG2_Ill_manta_2029:HG2_Ill_SVrefine2DISCOVARplusDovetail_11257:HG2_Ill_MetaSV_4384:HG2_Ill_GATKHCSBGrefine_4912:HG2_10X_SVrefine210Xhap12_5031:HG3_PB_SVrefine2PBcRDovetail_3237:HG2_PB_pbsv_7038;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5031:HG2_Ill_GATKHCSBGrefine_4912:HG2_Ill_MetaSV_4384:HG2_Ill_SVrefine2DISCOVARplusDovetail_11257:HG2_Ill_manta_2029:HG2_PB_HySA_13016:HG2_PB_SVrefine2Falcon1plusDovetail_10314:HG2_PB_SVrefine2Falcon2Bionano_3531:HG2_PB_SVrefine2PB10Xhap12_5140:HG2_PB_SVrefine2PBcRplusDovetail_9600:HG3_10X_allpass_1454:HG3_Ill_GATKHCSBGrefine_4855:HG3_Ill_SVrefine2DISCOVARDovetail_5335:HG3_Ill_manta_1669:HG3_PB_SVrefine2Falcon1Dovetail_4250:HG4_10X_allpass_1400:HG4_Ill_GATKHCSBGrefine_4973:HG4_Ill_SVrefine2DISCOVARDovetail_5202:HG4_Ill_manta_1760:HG4_Ill_scalpel_6826:HG4_PB_HySA_10384:HG4_PB_SVrefine2Falcon1Dovetail_4246:HG4_PB_SVrefine2PBcRDovetail_3472;NumExactMatchSVs=23;ClusterMaxShiftDist=0.135537;ClusterMaxSizeDiff=0.135537;ClusterMaxEditDist=0.135537;PBcalls=17;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=24776;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=6:77920100-77920431;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3437.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:35:0|1:27:1:0:33:./.:0:0:0:0:0/1:21:23:0/1:23:4:.:.:.
chr6	78426661	HG2_PB_SVrefine2PB10Xhap12_5144	TTGTAGGGGTGGGTTGCCCCTACACACCTGTGGGTGTTTCTCGTAAGGTGGGACGAGAGATTTGGAAAAGAAAAAGACACAGAGACAAAGTATAGAGAAAGAAATAAGGGGACCCGGGGAACCAGCGTTCAGCATATGGAGGATCCCGCCAGCCTCTGAGTTCCCTTCGTATTTATTGATCATCTGTGGGTGTTTCTCAAAGAGGGGGATGTGTCAGGGTCACAAGACAATTGTGGGGAGAGGGTCAGCAGACAAACACGTGAACAAAGGTCTTGGCATCATAGACAATGTAAAGGATTAAGTGCTGTGCTTTTAGATATGCATACACATAAACATCTCAGTGCTTTACAAAGCAGTATTGCTGCCCGCAGGTCCCACCTCCAGCCCTAAGGCGGTTTTTCCCTATCTCAGTAGATGGAGCATACAATCAGGTTTTATACCGAGACATTCCATTGCCCAGGGACAGGCAGGAGACAGATGCCTTCCTCTTGTCTCAACTGCAAGAGGCATTCCTTCCTCTTTTACTAATCCTCCTCAGCACAGACCCTTTACGGGTGTCGGGCTGGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCGGCCTTCCGCAGTTTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCCTGCACCGCCCTTAATCCATTTAACTCTGAGTTGACACAGCACACATTTCAGAGAGCACGGGGTTGGGGGTAAGGTCACAGAATCTCAAGGCAGAAGAATTTTTCTTAGTACATAACAAAATGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTGCTTTTCCCCACATTTCCCCCTTTTCTTTTCGACAAAACCGCCATCGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTCGGAGCTGTTGGGTACACCTGCAGACTAACAACAGACAAAACAGGCACACAAGGATTAATATGAGATTTATAATCGTAGTACTTCCAATGGTCTTAACCCAAGTGACAGGGTTAAGATTTGCGAGGCCATCAGCAACTCCTGCAATTGCCTCAGTTCCTGGCACCAAATTTAAATGGGCTTTTGATGCTTCGAAAATTTGTTCTTTTAATTTGGAAATGTCTAAAGTGAGATTATCTTCTCTTCCCTGTAGATGGCGTCTAACCATGTCCCAGTGATGCTCAGACTCATTATAAATTTGGGGTGTAATACAAAAATCTGACGTATTCCAGTCACATTGTAACTGGAAACGATGTTCTAAGCTCATGAGTCTGTCTCCCATCCAAATGACAGTTTGTCTAAGATCATTAATTTGATTTGCCAATTTTTGATCAATACTAGATTGTGAATTCCACAATCTTGTAGAATTTTTTTGCCCATCATTAACAAAGTTTACTGACTGAACAGAAGAGTGCAATGCAACTCCTGCTACAGCAGCCGTAGCTGTGACTGCAATTAATCCCATAATCACTGCAATTAAAGTAAAAATGAATCTTTTGGATCTATTTAAAACACCTTTTAATACTTCAGTCAAAATATGGATGGATGGTGAGGCCTCCCATGGTCGGTCCATGGACACAGGGATCCACACGCCCTCTCTTGCTCTCACCAGCAGAATACGGTGTTGCCAATTAAAAGTTGAATCAATGCAAGTAAGCAATCTACAATTTTCACAGGTTATAGTCTGGGAGTCTGGTTTAATAACTATATTTCCTACAACTAGCATATAAGGGGGCTTTACGCAACTTTGTAAAGGAAGTGTTAGACTGGAATTTAGGTCGACAGTATAAAATGGCTTACGATCTCTTGTTTCTAAAGTTTGATTTCCAGACCAAATTCTAATGTGGTGTGAGGCCACAGTAAGCCTCCATAATTCTGGATGTTCAGGACCAGAAACAGGACTTATTATTTTTGGTCTTGGGGTAGAGATTCCTTTTTCTCCCCATTCCCAAGGGTAGAAAGACTGCAATTTTTTATGCTTATGTTTGTCTAAACTTTCTGTTAAGTCGCTATCAACAGCTGGACTCACTTGTGCACTTGGACACGACTGAGTTTGTCCTGAGCAATTGTGGTAGAATTGACCTTGAGGTGTCCAATCTATAATAGTTCCAAATTCATTGTTTTGTAATATCACCGCACTATTGGCCACACATTCTTCCCAAACTAAAACTTCTGTATTTTTTGATTCTTTGGGAATTTCCTTGGGGCAAGGTTTCCCTTTAGGTCTAAATTTTAGTGATCTTTGATAAGAAAAGTCTTGTAAATAATTTACCCGTGGCCTGAGTGACATCCCGCTTACCATGTGATAAGTGAATCTACAGATGGGACTGACAATAGGTACTTCTACCAACCAATTTTGGACTGCAGGCATTAAACATCCTGGTGCTCTCCCTAGGCAAATAGGATAACGATACCCAATGGAAATATTTATCATCATCCCTTCTTCCTCAGGTTTGGCAGGGCAGCGATCATCTATGGGGCCAGGTACCCATACACTATCATTAACATATACTTCTATAGGATTATCCATCCATGTGACTGCCCGAATTAAGGGCGGGAAAGGCACATAGGCCCAGTTGGTATAGTTAGCTGCAGCTGCTCCTGCAGGCATAGGGAGACTTACCACCATTGATACAATCATCAAGGCTGCAAGCAGCATACTCTCTGGGGTTTGTGTCACCTTTGTGTTCTCTAGATATTTTGTAGCTAACTGCGTCAGCTTCTTTAGTTGTGCCCAAGTCGGCGGCTCTGCCTTCTTGGTGGATGGCAACTTCATCTGTTCTTCTGACGTCACCATTTTGTTCATCTTGTGAGTCAACGGTGCTCGATTGCGGTGTCTCCGTCTCCGCGGAGGTGCTTTTCTTTGCATCTCTGATGGGTTCATTGTAGAACTTCAAAGGTCTAGTGGGTATCCAAACAGGAAGCTGATTTTCTCCTGGTGAAACACAAGCAAAACCTCTCCCCCACGTTATCACCTTCCCTATTTCCCATGTCTTATTTTTATTATCTTTCCACCAAATTAGTTTTCCTTCATGTGGGCTGTTCTTTTTACCAGTAAGATGTTGTTCTGCAGAAGTAGTAGTCTGATTTCTATAAATGTTTAAAAAATTTAAAGTATAGAGTGCTAGATTAAGTTGCATCTGAGGAGTGGTACACTCCTTACTGTCTCCCCCTTCTTTTTGTTTAACTAATTGAGTTTTGAGTGTTCTATTAGTTCTTTCAACTATGGCCTGTCCTTGGGAATTATAAGGAATTCCTGTTGTATGTGAAATTTTCCACTGACTTAAGAATTTTTGGAAAGCTTTACTACAATATCCTGGTCCATTGTCAGTTTTGATTTTTTCTGGAACTCCCATTACAGCAAAACAAGACAATAAATGTTTTTTAACATGGGAAGTACTTTCTCCTGTTTGGCAAGTTGCCCATATGAAATGTGAATAAGTATCAACTGTTACATGAACATATGATAATCTTCCAAATGAAGGTACATGCGTGACACAGACCTCTGGGATTAACTCCTGCCTCTTGAGTGGGCAGGTGTAAGACTTGACACTGGGTGCAATGTTGTACAATATCTTTTGCCTGTTTCCATGTGACATCAAATTTGTTTTTTAATCCTGCTGCATTTACATGAGTCAAAGCATGAAGTTCTTGTGCTTTTATGAGTGCAGATGATACCAGTAAGTCAGCTTGTTCATTTGCTTTAGTCAAAGGCCCTGGTAAATTAGTGTGTGCTCGAATATGAGTAATATAAAATGGGAAATTTCTTTTTCTTACAGTTTGTTGTAATAAATTGAATAGCTGGTTTAACTGATCATCCATGCTATATTTAATTAGAGCTGTCTCAACATCCCTTGTAGCCTGTACTACATATGCAGAATCTGATATAATATTGATAGGTTGGTCAAAATCTTGTAACACTGTAATGACTGCAACCAACTCTGCTCTTTGAGCCGATTGATATGGAGTTTTGATTACTCGTTCTTTCGGCCCTGTGTAAGCTGCTTTTCCATTGCTGGAACCATCAGTAAATACTGTTAGAGCATTTTCTAAAGGTTCACGTCTGGTAATTTTAGGTAGAATCCAAGTAGTCAATTTTAAGAACTGGAAGATCTTTGTTTTTGGGTAATGATTATCAATAATTCCCACAAAATTAGCAAGACCAATCTTCCATGCACCAGAATTGATAAAGGCTTGTCTAACTTGTTCCTTGGTTAAAGGGACAACTATTTTGTCTGGGTCATTTCCACATAATTTTATTATTCGTAATCTTGTCTGACCGATTAATGTAGCTATTTGATCCAAGTACAGTGTAAAAGTCTTAACTGTACTGTGAGGAAGGAATGACCACTCCACAAGATCAGTATTTTGAATAATGATGCCTGTTGGAGAATGTGCAGTGGCAAAAATCAAAAGTTGGAGTGGGGCTAAGGGATCTATTCTATTTATTTGCGCTGACTGAATTTTTTCTTCCACTAATTTAATTTCTTTTGTTGCCTCTGGGGTTAACATTCTTTTACTATTTAAGTCTGAGTCTCCTCTTAAGATAGAGAACAAATTTGACATGGCATAAGTAGGAATGCCTAGAGTTGGCCAAATCCAATTAATATCTCCTAGTAATTTTTGAAAATCATTTAGTGTTTTTAATGTGTCTTTTCTTATTTCTATTTTTTGTGGCTTAATTTTTCTATTTTCTATCTGCATCCCTAAATAATGAAAAGGAGTAGAGGTTTGGATCTTATCAGATGCTATTGCCAGTCCAGCATTGGCAACCTCTGCTTGCAGAAATGTATAACAGTCAATTAATTTATCTTTCGTTTCTGCAGCACATAAAATATCATCAATATAATGAATAATATAACAGTCTGAAAACTTTAACTGGTTGAAGAGCTCGACCTACAAAAGTCTGACAAATAGTTGGACTATTAAGCATTCCCTGAGGTAACACTTTCCACTGAAACCTGGTGGCTGGTTCTTTATTATTTATGGCTGGTATAGTAAAGGCAAATTTTTCACAATCCTGCTCTGCCAGAGGGATGGTAAAAAAGCAATCCTTTAGATCAATTATAATTAAAGGCCAATCTTTTGGGATCATGGCCGGAGAGGGCAACCCGGGTTGGAGAGGCCCCATGGGTTGAATTACGGCGTTTACAGCCCTTAAGTCAGTTAACATACGCCATTTGCCTGATTTCTTCTGAATTACAAACACAGGAGAATTCCAAGGTGAGAACGAAGGCTCAATATGACCCTTTTCTAACTGTTCATTTGCTAATAAATGTAAAGCCTCCAGTTTTTGTTTTGGTAGCGGCCACTGATTTACCCACACCGGTTTTTCTGTTTTCCAAGTTAATGGTATGGGTTTAGGAGGCTCTATAGTGGCCGCCCCTAAAAAGGATACCCTATTCCTTCTCTTTTTTGATTTATTTTAGCCTCAAATGGAATTTTAATGCCATCTTCATTTTTCCCTAGTCCCTTTCCTGGTATATATCCCCTCTTGGTCATGATTTTTTGACTCGTGGGGCTATATAATGGAGCGGGCATGGTGATTTCCGCACCCCATTGTTGTAATAAATCTCGACCCCACAGATTAAGAGGAATTGAAGTAATCATTGGCTGAACAGTACTTTCTTGATTATCTGGCCCTAAGCAATGTAAAATCTCCATACTTTGATACACTTCTGAGGCTGTGCCTATGCCGACAAGTCCTGTAACAGCCTTTTGTTTAGGCCAATTTTTTGGCCACTGATTTAAAGCAATGATAGAGACATCTGCTCCAGTGTCTACCAACCCTTCAAACTGTTTTCCTTGAATAATGGCCTTACACACAGGTCTGTTCTCTGAGACCTGACTTGCCCAATATGCAGCCTTTCCTGTTGGATCAGTGCTTCCAAGCCCTCCTATTCTTTTTATTTCACTATTTCCACCCTTAATATATGGCAGGAGTAATAATTGAGCAATCCTGTCTCCTGGACTGGCACTCCAAGGAACTGAAGAGCTAATAACCAACTGAATTTCGCCTTTATAGTCTGAATCAACCACACTAGTATGAATTTGAACTCCTTTTAGATTTAGACTTGATCTTCCCAAGATTAGTCCTACAGTCCCCTCAGGCAGGGGGCCATATACCCCTGTAGGGATTTTTTGTGGGGGCTCCCCTGGAAGCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCACTTGTGGCGGGGGACAATTGTTGTATTGTGGTAACTGGCTTATTCCCTGAAACACTTGGGACAGTGGGGGTTGTTGTCCCTGAAAACCCTGAGGAACAAATGGCTGAATTGGGAATGCCCCAGTTTGTTGTGGGGCCTGAGGCTGGCCCCTTTGCTCGTTTCCCGACAATGGTTGCCCATTTTTATCAAATTTAGAACGACATTGACTAGCCCAATGTTTTCCTTTTTTACATCTTGGACATAAGTCAGGTGGCTCTCTACCTGTTGTAGTTGCTTGAATAGTTATATTCTGTTTGTTTAAGACTGGGCAATTCTTTTTTAAGTGACCAATTTGACCACAATTATAACATTTTCCTCCAAATGTTCTAACTTGTCCTCCTAAAACAACTCCTGTTATTGCTTGAGCCATAAGCATAGCTTTATGCATAGCTCCTCCGATTCCATCACAGGCTTTTACATATTCTGAGATTACATCTGATCCTGCAGGAACCTTTCCTTTTAATGGCTTAATGGCTGATTGACACTCAGGATTGGCGTTTTCATATGCCATCAACTCCACTATGACCTTACGGGCTTTTTCATCGGCAATTGACTTTTGAGCAACATCTTGGAGCCTTGCCACAAAATCAGGATAGGGCTCTTTTGAACCTTGTCTTACTGTATTAAATGAGGGGCAGGTACTTCCTGGGTCTTGGATTTTTTCCCAGGCTCTAAGGCAGATAGCTCTAACTTGCTCAATGGCCTCATTTTGCATTAATGCTTGTTGACTAATAGTACTCCAATTTTGACCTATTCCTAATAGTTGATCTGCATCTATGTTAACTGGAGGATTGGCAGCCCTATTTCTTCGGACCTGTTCTTGTACCCCATCAATCCACCAAGTCTTAAATTGTAAAAATTGAGAGGGTGAGAGAGACGATTTTGCCAGAATCTCCCAATCATAAGGAATGAGTCTATGTCCATGAGCAATGGAATCTAATAATGTCCTCATATAAGGGGAGTTGGGTCCATACTGTTTTACTCCCTCTTTCATATCTTTTAGTATTTTTATCGAAAAAGACTTGTATCTGGCCTCAACTGTGGGAGGCTCTCCCTCTTGGGCTCCTTCTCCAGGTGGCATCGGTTCTAACGTTACTGGGAATTGCCATGCCTCAGTATCTCCTTCCTTTCTTGATTTATCAATAATTTCATGTAATTCACTACCCTGTCTACTAGGTGGTGCCGTAGGATTAAGTCTCCTAGTGGGCGGCTGAGGGTATGGCGCCCTGCCCTGTGGTGCTGGGGGCATTCCTGGATATCCATACTGACTTTCTGGGGGTGGCCGATACTGAAGTTCAGCCGGAGGCCAGTATTGATAGGCTACTGGCGGTTGGGTCTTATTTTCTTTAACCTGCTTTTGAGGTTGTAATGTTACAGGCACCTGACCTGCTGGAAGAGGACTTGTGCCTCGTGGTTTAGACTCTGATGGCCCCACTAATTCTGGACCTTTTCCTTCTAATTTTAACGTTTCAGGATATATCACCTCCTGTAATTGATTATAGTCAACATTTTGCGTTGACTGAGCCATTACCGGCTCTGCTACATATTCGCAATGTAAACTTTCGGTTTCTTTCTGGGATTTTTTCCTTGTCTTTTCATTACAATCTATTATACCGCTTCCAGGGGCATCAGAAACTGAAATACTATCTTCTTCTGTTTGAAATGGTTCTAAAGCTGCTTTAATAATGGCCCAATCATTCCATACTGTAAGTGGAATGATATTACCCTTCCTACCTGCTTGTTTTAGTTCCTTACCAATTCTTTTCCAATCTTTTAGATCTAAAGTTCCTTGTTCTGGAAACCATGGGCAAAATTGTTCTATTATTTGAAATAGCTTGATTAGATTTTTTGTAGATACTTTAACTCCCCCTCTTTTTAAAAGAATTTTAATAAAGCTGAGATAAGAGGCATATTTACTTTTAATTTTACTTTTAGTTTGCCCCATTATCACCCTAGCTTCTTCCGAGCGCACAAGCTTACCGTAAGGCTGACTGTAGACGTACTCGGGATCTCTCGTCGACTTGTCCTCAATGACCACGCTCGAGCGTACCTTCACCCTAGAGAAAAGCCTCCACGTTGGGCACCAGA	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10318:HG3_PB_pbsv_6844:HG2_PB_pbsv_7045:HG3_PB_pbsv_6843:HG2_PB_pbsv_7044:HG4_PB_SVrefine2Falcon1Dovetail_4248:HG3_PB_SVrefine2PBcRDovetail_3243:HG3_PB_SVrefine2Falcon1Dovetail_4254:HG2_PB_SVrefine2PBcRplusDovetail_9605:HG2_PB_SVrefine2PB10Xhap12_5144:HG2_PB_SVrefine2Falcon2Bionano_3536;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10318:HG4_PB_SVrefine2Falcon1Dovetail_4248:HG3_PB_SVrefine2PBcRDovetail_3243:HG3_PB_SVrefine2Falcon1Dovetail_4254:HG2_PB_SVrefine2PBcRplusDovetail_9605:HG2_PB_SVrefine2PB10Xhap12_5144:HG2_PB_SVrefine2Falcon2Bionano_3536;NumExactMatchSVs=7;ClusterMaxShiftDist=0.000118175;ClusterMaxSizeDiff=0.000118168;ClusterMaxEditDist=0.000590877;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-8462;DistBack=9888;DistForward=-8016;DistMin=-8016;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=960;REFWIDENED=6:78426662-78436083;PctSeqSimilarity=0.9981;PctSizeSimilarity=1;PctRecOverlap=0.9695;SizeDiff=0;StartDistance=-258;EndDistance=-258;GTMatch=0;TruScore=98;MatchId=3438.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:61:0|1:26:2:1:27:./.:0:0:0:0:0/0:16:0:0/1:384:172:.:.:.
chr6	82567178	HG3_Ill_150bpfermikitraw_9348	CTACATCATTTTATAAATAAACATCTACAAACCTTAATTCTGAGAGCTTTGCTAGTTTTCTCTG	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9308:HG4_PB_HySA_10420:HG2_PB_HySA_13056:HG4_PB_assemblyticsfalcon_22710:HG4_Ill_GATKHC_11846:HG4_Ill_GATKHCSBGrefine_4992:HG3_Ill_GATKHC_11763:HG3_Ill_GATKHCSBGrefine_4866:HG2_Ill_GATKHC_11809:HG2_Ill_GATKHCSBGrefine_4921:HG4_Ill_manta_1767:HG3_Ill_manta_1673:HG2_Ill_manta_2032:HG2_Ill_SpiralSDKrefine_14862:HG4_Ill_Spiral_589:HG3_Ill_Spiral_7764:HG2_Ill_Spiral_509:HG4_PB_pbsv_7052:HG3_PB_assemblyticsfalcon_23195:HG2_PB_assemblyticsfalcon_23323:HG2_PB_assemblyticsPBcR_22555:HG3_PB_HySA_10812:HG3_PB_pbsv_6855:HG2_PB_pbsv_7057:HG4_Ill_svaba_9214:HG4_Ill_scalpel_6853:HG4_Ill_Krunchall_10502:HG4_Ill_250bpfermikitraw_9912:HG4_Ill_150bpfermikitraw_9501:HG3_Ill_svaba_9205:HG3_Ill_Krunchall_9931:HG3_Ill_250bpfermikitraw_9585:HG3_Ill_150bpfermikitraw_9348:HG2_Ill_svaba_9127:HG2_Ill_scalpel_7022:HG2_Ill_Krunchall_10184:HG2_Ill_250bpfermikitraw_9900;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9308:HG4_Ill_svaba_9214:HG4_Ill_scalpel_6853:HG4_Ill_Krunchall_10502:HG4_Ill_250bpfermikitraw_9912:HG4_Ill_150bpfermikitraw_9501:HG3_Ill_svaba_9205:HG3_Ill_Krunchall_9931:HG3_Ill_250bpfermikitraw_9585:HG3_Ill_150bpfermikitraw_9348:HG2_Ill_svaba_9127:HG2_Ill_scalpel_7022:HG2_Ill_Krunchall_10184:HG2_Ill_250bpfermikitraw_9900;NumExactMatchSVs=14;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.031746;PBcalls=10;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=-63;DistBack=105389;DistForward=90864;DistMin=90864;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=64;REFWIDENED=6:82567179-82567305;PctSeqSimilarity=0.9931;PctSizeSimilarity=0.9841;PctRecOverlap=0.6406;SizeDiff=1;StartDistance=-23;EndDistance=-22;GTMatch=0;TruScore=87;MatchId=3439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:66:1/1:1:20:1:19:./.:0:0:0:0:1/1:0:40:./.:.:.:.:.:.
chr6	83094623	HG2_Ill_manta_2033	AATCCTGTAACTAATAACAGATGAGATGTTCATTATGTAGAGAGTGTTTTTTT	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9316:HG2_PB_HySA_13063:HG3_PB_HySA_10821:HG2_PB_pbsv_7058:HG3_PB_pbsv_6856:HG3_PB_SVrefine2PBcRDovetail_3252:HG3_PB_SVrefine2Falcon1Dovetail_4266:HG3_Ill_svaba_9210:HG3_Ill_manta_1675:HG3_Ill_Krunchall_9941:HG3_Ill_GATKHC_11771:HG3_Ill_GATKHCSBGrefine_4867:HG3_Ill_250bpfermikitraw_9593:HG3_Ill_150bpfermikitraw_9356:HG2_PB_SVrefine2Falcon2Bionano_3547:HG2_PB_SVrefine2Falcon1plusDovetail_10329:HG2_Ill_svaba_9133:HG2_Ill_manta_2033:HG2_Ill_SpiralSDKrefine_14867:HG2_Ill_Krunchall_10189:HG2_Ill_GATKHC_11816:HG2_Ill_GATKHCSBGrefine_4922:HG2_Ill_250bpfermikitraw_9906;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9316:HG3_PB_SVrefine2PBcRDovetail_3252:HG3_PB_SVrefine2Falcon1Dovetail_4266:HG3_Ill_svaba_9210:HG3_Ill_manta_1675:HG3_Ill_Krunchall_9941:HG3_Ill_GATKHC_11771:HG3_Ill_GATKHCSBGrefine_4867:HG3_Ill_250bpfermikitraw_9593:HG3_Ill_150bpfermikitraw_9356:HG2_PB_SVrefine2Falcon2Bionano_3547:HG2_PB_SVrefine2Falcon1plusDovetail_10329:HG2_Ill_svaba_9133:HG2_Ill_manta_2033:HG2_Ill_SpiralSDKrefine_14867:HG2_Ill_Krunchall_10189:HG2_Ill_GATKHC_11816:HG2_Ill_GATKHCSBGrefine_4922:HG2_Ill_250bpfermikitraw_9906;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0384615;PBcalls=8;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=14484;DistForward=-7;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=50;REFWIDENED=6:83094624-83094725;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3440.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:33:0|1:27:0:0:33:./.:0:0:0:0:0/1:35:27:./.:.:.:.:.:.
chr6	83676074	HG3_Ill_MetaSV_4574	TAAAAACCACTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_510:HG2_PB_pbsv_7063:HG2_Ill_Krunchall_10194:HG2_PB_assemblyticsfalcon_23334:HG2_PB_assemblyticsPBcR_22566:HG3_PB_pbsv_6861:HG3_Ill_manta_1678:HG3_Ill_SVrefine2DISCOVARDovetail_5355:HG3_Ill_MetaSV_4574:HG3_Ill_GATKHCSBGrefine_4870:HG2_PB_SVrefine2PBcRplusDovetail_9618:HG2_PB_SVrefine2Falcon1plusDovetail_10332:HG2_Ill_manta_2037:HG2_Ill_breakscan11_1029:HG2_Ill_MetaSV_4392:HG2_Ill_GATKHCSBGrefine_4924:HG2_10X_allpass_1193;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_1193:HG2_Ill_GATKHCSBGrefine_4924:HG2_Ill_MetaSV_4392:HG2_Ill_breakscan11_1029:HG2_Ill_manta_2037:HG2_PB_SVrefine2Falcon1plusDovetail_10332:HG2_PB_SVrefine2PBcRplusDovetail_9618:HG3_Ill_GATKHCSBGrefine_4870:HG3_Ill_MetaSV_4574:HG3_Ill_SVrefine2DISCOVARDovetail_5355:HG3_Ill_manta_1678:HG3_PB_pbsv_6861;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0744337;ClusterMaxSizeDiff=0.0744337;ClusterMaxEditDist=0.0744337;PBcalls=6;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=-374;DistForward=-312;DistMin=-374;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:83676075-83676399;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:31:0|1:24:1:0:27:./.:0:0:0:0:0/1:29:24:0/1:30:8:.:.:.
chr6	85318143	HG3_PB_SVrefine2Falcon1Dovetail_4272	GAGAAATGTGAGGGGAGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCTACGCAGAAGATGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGTGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCTGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCCGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTTGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCTGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAAGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGAAGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGTGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCAAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACACCATAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAACTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAACGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAGATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAAAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAGCCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGATGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCTAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAACAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAGAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCACTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAGTACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGCCTGGTTCAATATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTCTCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAGTTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCCTGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGACCAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTACTGCACAGCTAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCAAAAGAACACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTAACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAGAAATGTTTTTTTTAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1030:HG3_PB_assemblyticsfalcon_23213:HG2_PB_assemblyticsfalcon_23343:HG2_PB_assemblyticsPBcR_22576:HG2_10X_allpass_1194:HG3_10X_allpass_1455:HG4_Ill_Krunchall_10529:HG3_Ill_Krunchall_9959:HG2_Ill_Krunchall_10206:HG4_PB_assemblyticsfalcon_22730:HG4_10X_allpass_1403:HG2_PB_pbsv_7065:HG3_PB_HySA_10835:HG2_PB_HySA_13081:HG2_Ill_tnscope_833:HG4_PB_pbsv_7063:HG4_PB_SVrefine2PBcRDovetail_3490:HG4_PB_SVrefine2Falcon1Dovetail_4266:HG4_Ill_SVrefine2DISCOVARDovetail_5229:HG4_Ill_MetaSV_4577:HG3_PB_pbsv_6864:HG3_PB_SVrefine2PBcRDovetail_3256:HG3_PB_SVrefine2Falcon1Dovetail_4272:HG3_Ill_SVrefine2DISCOVARDovetail_5360:HG3_Ill_MetaSV_4576:HG2_PB_SVrefine2PBcRplusDovetail_9621:HG2_PB_SVrefine2PB10Xhap12_5164:HG2_PB_SVrefine2Falcon2Bionano_3553:HG2_PB_SVrefine2Falcon1plusDovetail_10334:HG2_Ill_SVrefine2DISCOVARplusDovetail_11285:HG2_Ill_MetaSV_4394;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_MetaSV_4394:HG2_Ill_SVrefine2DISCOVARplusDovetail_11285:HG2_PB_SVrefine2Falcon1plusDovetail_10334:HG2_PB_SVrefine2Falcon2Bionano_3553:HG2_PB_SVrefine2PB10Xhap12_5164:HG2_PB_SVrefine2PBcRplusDovetail_9621:HG3_Ill_MetaSV_4576:HG3_Ill_SVrefine2DISCOVARDovetail_5360:HG3_PB_SVrefine2Falcon1Dovetail_4272:HG3_PB_SVrefine2PBcRDovetail_3256:HG3_PB_pbsv_6864:HG4_Ill_MetaSV_4577:HG4_Ill_SVrefine2DISCOVARDovetail_5229:HG4_PB_SVrefine2Falcon1Dovetail_4266:HG4_PB_SVrefine2PBcRDovetail_3490:HG4_PB_pbsv_7063;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00477799;ClusterMaxSizeDiff=0.00477799;ClusterMaxEditDist=0.00477799;PBcalls=17;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-6077;DistBack=19581;DistForward=-6064;DistMin=-6064;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:85318144-85324235;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:113:1/1:0:30:0:26:./.:0:0:0:0:1/1:0:32:1/1:7:415:6122:.:.
chr6	85771750	HG2_Ill_manta_2038	GTATCAAGTAAAAAAAATTATTTCCTGCCATTAAAAGGTATGAAAGTTAGAACTTCAC	G	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_22732:HG3_PB_HySA_10838:HG3_PB_assemblyticsfalcon_23216:HG3_Ill_svaba_9231:HG3_Ill_scalpel_7125:HG3_Ill_GATKHCSBGrefine_4873:HG3_Ill_Cortex_3223:HG2_Ill_svaba_9156:HG2_Ill_manta_2038:HG2_Ill_SpiralSDKrefine_14876:HG2_Ill_Krunchall_10210:HG2_Ill_GATKHCSBGrefine_4926:HG2_Ill_Cortex_7827:HG2_10X_allpass_1195:HG3_PB_pbsv_6865:HG2_PB_pbsv_7066;NumClusterSVs=16;ExactMatchIDs=HG2_10X_allpass_1195:HG2_Ill_Cortex_7827:HG2_Ill_GATKHCSBGrefine_4926:HG2_Ill_Krunchall_10210:HG2_Ill_SpiralSDKrefine_14876:HG2_Ill_manta_2038:HG2_Ill_svaba_9156:HG3_Ill_Cortex_3223:HG3_Ill_GATKHCSBGrefine_4873:HG3_Ill_scalpel_7125:HG3_Ill_svaba_9231:HG3_PB_assemblyticsfalcon_23216;NumExactMatchSVs=12;ClusterMaxShiftDist=0.12844;ClusterMaxSizeDiff=0.12844;ClusterMaxEditDist=0.165138;PBcalls=5;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=23342;DistForward=41514;DistMin=23342;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:85771749-85771809;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3443.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:1|0:0:27:27:2:./.:0:0:0:0:0/1:24:11:./.:.:.:.:.:.
chr6	86026352	HG3_Ill_SVrefine2DISCOVARDovetail_5363	TAAGGGTGGGTCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_7070:HG4_Ill_Krunchall_10535:HG3_PB_assemblyticsfalcon_23218:HG2_PB_assemblyticsfalcon_23351:HG2_PB_assemblyticsPBcR_22581:HG4_PB_assemblyticsfalcon_22734:HG3_Ill_Krunchall_9966:HG2_Ill_Krunchall_10215:HG2_PB_HySA_13089:HG2_Ill_Spiral_511:HG4_PB_pbsv_7067:HG2_PB_HySA_13088:HG4_Ill_MetaSV_4580:HG3_Ill_MetaSV_4577:HG2_Ill_tnscope_834:HG2_Ill_MetaSV_4395:HG4_PB_SVrefine2PBcRDovetail_3491:HG4_PB_SVrefine2Falcon1Dovetail_4267:HG4_Ill_scalpel_6869:HG4_Ill_manta_1772:HG4_Ill_SVrefine2DISCOVARDovetail_5232:HG4_Ill_GATKHCSBGrefine_4999:HG4_10X_allpass_1404:HG3_PB_pbsv_6869:HG3_PB_SVrefine2PBcRDovetail_3258:HG3_PB_SVrefine2Falcon1Dovetail_4273:HG3_Ill_scalpel_7130:HG3_Ill_manta_1680:HG3_Ill_SVrefine2DISCOVARDovetail_5363:HG3_Ill_GATKHCSBGrefine_4877:HG3_10X_allpass_1456:HG2_PB_SVrefine2PBcRplusDovetail_9622:HG2_PB_SVrefine2PB10Xhap12_5166:HG2_PB_SVrefine2Falcon2Bionano_3556:HG2_PB_SVrefine2Falcon1plusDovetail_10338:HG2_Ill_scalpel_7041:HG2_Ill_manta_2040:HG2_Ill_SVrefine2DISCOVARplusDovetail_11292:HG2_Ill_GATKHCSBGrefine_4929:HG2_10X_allpass_1196:HG2_10X_SVrefine210Xhap12_5037:HG2_Ill_breakscan11_1031;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5037:HG2_10X_allpass_1196:HG2_Ill_GATKHCSBGrefine_4929:HG2_Ill_SVrefine2DISCOVARplusDovetail_11292:HG2_Ill_manta_2040:HG2_Ill_scalpel_7041:HG2_PB_SVrefine2Falcon1plusDovetail_10338:HG2_PB_SVrefine2Falcon2Bionano_3556:HG2_PB_SVrefine2PB10Xhap12_5166:HG2_PB_SVrefine2PBcRplusDovetail_9622:HG3_10X_allpass_1456:HG3_Ill_GATKHCSBGrefine_4877:HG3_Ill_SVrefine2DISCOVARDovetail_5363:HG3_Ill_manta_1680:HG3_Ill_scalpel_7130:HG3_PB_SVrefine2Falcon1Dovetail_4273:HG3_PB_SVrefine2PBcRDovetail_3258:HG3_PB_pbsv_6869:HG4_10X_allpass_1404:HG4_Ill_GATKHCSBGrefine_4999:HG4_Ill_SVrefine2DISCOVARDovetail_5232:HG4_Ill_manta_1772:HG4_Ill_scalpel_6869:HG4_PB_SVrefine2Falcon1Dovetail_4267:HG4_PB_SVrefine2PBcRDovetail_3491;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0805153;ClusterMaxSizeDiff=0.0805153;ClusterMaxEditDist=0.0805153;PBcalls=17;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=-857;DistForward=-303;DistMin=-857;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8231;REFWIDENED=6:86016731-86026667;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3444.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:80:1/1:0:41:0:34:./.:0:0:0:0:1/1:0:25:./.:2:16:.:.:.
chr6	86144298	HG4_PB_SVrefine2Falcon1Dovetail_4268	TGAAATTGCAGGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1032:HG2_PB_assemblyticsPBcR_22582:HG2_10X_allpass_1197:HG2_PB_SVrefine2PBcRplusDovetail_9623:HG2_PB_SVrefine2PB10Xhap12_5168:HG4_PB_assemblyticsfalcon_22735:HG3_PB_assemblyticsfalcon_23219:HG4_PB_pbsv_7069:HG3_PB_pbsv_6871:HG2_PB_HySA_13091:HG2_PB_pbsv_7072:HG2_PB_PB10Xdip_26127:HG2_PB_PB10Xdip_26128:HG4_Ill_MetaSV_4582:HG2_Ill_tnscope_835:HG4_PB_SVrefine2PBcRDovetail_3492:HG4_PB_SVrefine2Falcon1Dovetail_4268:HG4_Ill_manta_1774:HG4_Ill_SVrefine2DISCOVARDovetail_5234:HG4_Ill_Krunchall_10538:HG4_Ill_GATKHCSBGrefine_5001:HG4_10X_allpass_1405:HG3_PB_SVrefine2Falcon1Dovetail_4274:HG3_Ill_Krunchall_9969:HG3_Ill_GATKHCSBGrefine_4879:HG3_10X_allpass_1457:HG2_PB_assemblyticsfalcon_23352:HG2_PB_SVrefine2PB10Xhap12_5167:HG2_PB_SVrefine2Falcon1plusDovetail_10339:HG2_Ill_manta_2042:HG2_Ill_MetaSV_4396:HG2_Ill_GATKHCSBGrefine_4931:HG2_10X_SVrefine210Xhap12_5039;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5039:HG2_Ill_GATKHCSBGrefine_4931:HG2_Ill_MetaSV_4396:HG2_Ill_manta_2042:HG2_PB_PB10Xdip_26128:HG4_PB_SVrefine2PBcRDovetail_3492:HG4_PB_SVrefine2Falcon1Dovetail_4268:HG4_Ill_manta_1774:HG4_Ill_SVrefine2DISCOVARDovetail_5234:HG4_Ill_Krunchall_10538:HG4_Ill_GATKHCSBGrefine_5001:HG4_10X_allpass_1405:HG3_PB_SVrefine2Falcon1Dovetail_4274:HG3_Ill_Krunchall_9969:HG3_Ill_GATKHCSBGrefine_4879:HG3_10X_allpass_1457:HG2_PB_assemblyticsfalcon_23352:HG2_PB_SVrefine2PB10Xhap12_5167:HG2_PB_SVrefine2Falcon1plusDovetail_10339;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0758725;ClusterMaxSizeDiff=0.0758725;ClusterMaxEditDist=0.0758725;PBcalls=17;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-334;DistBack=-356;DistForward=-322;DistMin=-356;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=6:86144299-86144645;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3445.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:26:0:1:27:./.:0:0:0:0:0/1:28:17:0/1:20:8:.:.:.
chr6	87406191	HG2_PB_HySA_13097	TTTTTTAAACCCACAAAATAAGAAATAAAATGTTTAGGGTAGGGTGGCTAGTTTTCATTATACATCCAAATCTAAACACTCTTCCTTTTATACTTTGTCTTTTAAAACTATAAAGTACAAAGTACTAATTTAACTTTGAGACAGAGTATAAATCTGAGATGAGAAAACAAATTAAAAAATCTTCAACAGTATTTCATTAATTCATTCAATATTTAATGGGCATTAACTATGTTATAATAGGTAATTAAGATATATTCGTAAACAGGACAGACTGTTTTCATGGAATTTATATTCCAGTGGTAATCAATCTAGATCATGTCCTTTGCAAGAACACGGACAGAGCTGGAGGCCACTATCCTTAGCAAACTAACACAGGAACAGAAAACCAAATACCGCATGTTCTCACTCATAAGTGGGAGCAAAATAATGGGAATACATGGACACATAGAAGAGAAGAACATACCCTGAGGCCTTTCAGAGCATGGAGGGTGGGAGAAGGAAGACCATCAGGAAAAATAACTAAGGGATGCTAGGCTTAATACCTGGGTGACAAAACAATCTGTACAACAAACCCCCATGACACAAGCTTACCTATGTAACAAACCTGAACATGTACCCCTGAACTTAAAAGTTAAATTTAAGAAATAATTCTAGAGTAATTACTTCTATTATATATATGTACCCATTTTATATTATTAATATTTCTATTAGCATAGGAAGGTTGGGTTACTGTTGCTTTGAAAGCCATAATTTCTCTAAATCTTTTCTATCTATCGTTCACAATTGCTCAAAACTTTTCATCAACAGGTGAATGAATAAACAAATTGTGATATGTTTATATTATGGACAATTATCCCACAACAAAAAGAAAATGAACTGTTGATATAGGCAACATGGATGACTCTCAAAAACATTATGCTGCGCAAAAGATGCCAGACACAAAAGAATACAAACTATATAACTCCATTATATGAAACTCTAGAAAAGATAAATCTACTCTGTGGTGACAAAAACTAGATCAGTGATTGTTTGGGGCTAAGGCCAAGGGAAATTGACAGGGAAGATAAGTTTGGAAAATGTTCTACATTTGTATCTTAATTGTTTTGTGGATTATACAAGTGTACAAATTTTGCATAATTTATTAAAATGTACATTTAAAATGAGTGCATTTTATCATGTGTAAATTATTCTTCAATAAAGTAAGTATTTAAAAGTCAACATAATTTATGTTATAGGCTCAAAGAGAAATTAATAAAAATTATTAGAATTAACAGAATAAAAGAGAAAATCATATAATCATCAAATTAGATGCAGAAAAAGCATTTGACAAAAACTCACTCATTTAAAAAAAAAACTATTAGCCAAGAGAAATAGGAGCCTAAAAAATAAACAAACCAAAGCCAACAAAATCCCCTTCAATAAATGTTAAAATGTTGAAAGCTCATCTCCTGAGATTTAGTATGAGATAATGTCTATTATCACCACTTCTTTTCAGTATTGTACTGGAAGTCCTAGCCAGTGCAATGAGGTCAGAAAAAAATGAAATAATAAGGATTATAAAAGAAGAAATAAAACTGTTATTACTCACACATGACATTATGCTTATAGTGAAAATTCAAAGGAATCTATGGATAAACAAAATTTAGCAATATCTTTAGATAAATATATAAAAATCAATTGCATGCCTGAATGTTTAGAATGAATGTTTGGAAATGAGATTTTTTAAAATATATTTTTTACAAGTATCAAAAAAGTAAATACCTAGGTTTAAATCTAATTAAGAATGTGTAAGATATCTACATAGGAAACTAAAAATATATTACTAAACAAAATTAAACACCTAAATAAAAGGAGTGATATATCATGTTCATGAACTGGAAGATTCACGGTTGTAAAAAATTAATTCCTCCAAATGGATCTATAGTAATAGTAAAATGTAAATCAGAATCCAAGCAGATTTTGTGGGGGTTTTTTGTTTTAGAAATTTGACAAGTTGATTCTAAAATAAGATACAATTCCAAAGGACCAAGAATAACCAAAGTATCTTGAGATATGTTGGAAGACTTATACTATCAGATATCAACATTTATAACAAAATGACAGCAATTACAGCCAAGTGACATTTGTGTATGAATAGATAAGTAAAGAAATATTACAAAACAGACTCAAGAAACAAATCTATGCATATGTGGTCACTTGGTAACAACATTGCCAGTGCATTGCAATGGTTAAGAAGGAAGACTTTTCCAATAAGTAGCACTGGATCAATTGATTTACCATATGAAAAATATGGTTATGCAGTACTTCCTCATACTATACACAAAAAAATTAATTACAGATGGATTATATACTTAAATGTTAAAGCAATAAATTTCTAGATGTTAATATAAGATATTGGGTTGATATCCTATATTATGGACCTATATGACCTATCTGACTTGGGTTGGTAAAGATTTCTTAAACACAAGAATCACTGAGTTTAAACAAAAAGATTAATTCATTGATTGCATTAATATCAAGAAATTATGTTTGTGTCATTGGCAGCATCATTAAAACACATTATTAGTGGAATAAAAAGCAAATTACAGCATAAGAGAAGATATTTCCAATTCTTATATTTAAAAATCATTACACATTTTAGAAACTCCTATAAATCAGTAAAAATAAAAACAAACAATTCAGTAAATATAAAAACAGTAAAAATAAAAATAATACACCCCTCACAGAAAACATTATCCAAAAGTAATAAATGCATATGAAAGTGCTAGTGTTCATTAGTCATCAGAAAAATATAAATCAAAATACTGGTACTAATCAGGTACCAGTACCCAAGCTTCACATGCTAAAGTGAAAATATTTGGTAGTACCAAGAGCTGACAAAACATGAAACTATCATATATTACTGGTGGAGGTATAAATTGATGTAACTTATTTGGGGAAATGGTACTAAAGCTGAACTTATGTTCATCCTAGAATTCAGTAATTCCAAATGTATGTATATACCCAACAGAAATGAGTATATATGTATACCAAAAGAACAAACAAAAATATCAATAACAGAATTATTCTTTGTAGGCAGAACCTGGGGAGGAAAGGATGACATTTTAAACTTATGGAATGTGCCTAAAGAACTATACATAGGTTTAAATTCTTATATTACAAAGAAGAGAGGTTGAAAATTTTAAGTCTTCAACTCAAAAAAAAAAGACAAAAATCAAAACACAACAAAGGTAATTCTAAGAAGGAGAAAGAAATACAAATGAGAAAATAATATAATAAAAACAGTAATATAATAGAAAAGATTAATAAAGTCAAAAGTGGTTCTTTGAAAAGCATTTAAATGGAAAAAGCTCTGGCAAGACTGGTTAAGAAAGAAAAGACATGGTACAAAGAAACTCTGTTTGGAATCTTTTTAAAAATAGTAAATATAAATGACATGATAAAAATCCTACGAACAACTCCATACTAATACATTTGGAAACAAATACAAAGTGAACAATTGTTAGATAAATTATCAAAACTGTCTTTTAATGGCAGTATTATACTTAAAGGCCCAGGAGTTATTAACAGGATGACTGTATACCTCCTGGTTGACACCTGTTTTCCCAGCATAATTGTCGCATCTTCTTTCACTCTTAATTGCTCCCGTTTGCCAATAATTTATGTGGTTGCCTATAAATAAGGGAATATTGGGGATTTAGTGGGAGTTCATGTAGAAGGAGGCCCTGACTATCATCCCTACATAGGCTGCTGTCCACAATTATAAATAAGTTGAATGTGATGAGATACATGTTGGAAAAAAAATGAGTACGTGTTTGCCTCTGTCTTGGCACACTGATAGCATCACCTGGCTTCATACCCATAAGGAGCTTTATAAAGAACGGTGGTGCTGACAGAGAAGGGATTCTCAAGTTCCTAAGAGCTTCTTGGTCCTCAATCATTTGCTCCAATTCTCTAAAGCTGCTCTGCCTATACAATTTTATCAGCTTGCAGGAGAGTCAGACTAAGATAAGGTTTGCTCCAACTACTGAATATTTCTTCTAGAAACTCACCATACCCTATGCACCCCCATCCTTAAGGCTAATTTTAACCATTTGCTTGTTTACAGTTATGGTGGATCCTTGACCATTTGAGTGGAACTGATTGACAGAATTGCCACTGTAACAAGAAATTTTAAAATACACTGTTTGCCTGTGATCATCTTTATATTTATGCTACTTTCATATTTTGCACTAAAATTTAATGTTAGCCCTTTTATAAGGATAGGCTGGAATATACTTTGGTAATAAACAACACCCAAAATATCAGTGTTTAACAAAGGTACATTTCTTTTTCATACTACATGTCTACAGTAGGTCAGAAGTGTACTGTTCATCTTTAGCACTCGAAAACCCAGGCTGACAGAGTAGCCATCATCTCAGACCTACTGGTTGCTCATTATAGAATTGACATAGGTCATTGTCAGTCAGAACTCACTGGCCAGAAATAGTTAAAAGGGTCCACCCCAAAATGACACCACGCTCACCCACACCGCTCTGTCTTCAATTTTTATGGTCTTTGGAGCCTATAAGGACTTTGTAGAAAGTATCATTCTCCTTTAAAATTGTTTTTTGAAAATGTTTTTTAATTTTATTTTAAGTTACATTGTATATGTGCAGAATGGGCAGGTTTGTTGCATAGTTAAACTTGTGCCATGGTGGTTTCCTGCATCTATCAACCCATCACCTAAGTATTAAGCCCAGCATGTATTCGTTATTTTTCCTGGTGCTCTCCCTCTCCCAGCCTCCCCAACAGGCTCTAGCATGTGCTGTTTTTCTCCCTGTGTTCATATGTTCTCATTGTTCATCTCCCGTTTATAAGTGAGAACATGCAGTGTTTTGTTTTCTGTTCCTGTGTTAGTTTGTTGAGGACAATGACTTCCTGCTCCAACCATGTTGCTGCAAAGGATATGATCTCGTTCCTTTTTATGGCTGCATAGTATTCCATGGTGTTTATGTACCACATTTTCTTTATACAGTCTATCATTGATGGGCATTTGGGTTGATTCCATGTCTTTGCTATTGTGAATCGTGCTGCAGTGAACATATGCTTGCATGTATCTTCGTAATAAAATGATTTATATATTTTTAAGATATGCCCAGTAATGAAATTGCTGGATCAAATGGTATTTCTGCCTCTAGGTATTTGAGGAATTGCCACACTGTCTTTCACAATGGGTGAGCTAATTTACATTCCTCCCAAGAGTGTAAAAGTGTTCCTATTTCTTCATAGCCTTGCAGCATCTGTTGTTTCTCGACTTTTTAATAATTGCCATTCTGACTGGCATGAGATGGTATTTCATTGTGGTTTTCATTTGTATTTTTCGAGTGATCAGTGATGTTGAGCTTTCTTTCATATGTTTGTTGCCACATAAATGGCTTCTTTTGAGAAGTGTCTATTCATGTCCTTTACTCATTTTAATGTGATTGTTTGGTTTTTTTCTTGTAACTTTGTTTAATTTCCTTGTAAACACTGGATATTAGACATTTGTCAGATGGATAGATTGCAAAAATTTTCTCCCTTTCTCTAGGTTGTCTGTTCTCTCTGATGATAGTTTCTTTTGCCATGCAGAAACTCTTTAGTTTAATTAGGTCACATTTGTCAATTTTCGCTTTTGTTACAATTGTTTTTAACATTTTCATCATGAAATTTTTGTCCATGCCTATGTCCTGAATGGTACTGCTTAGATTTTCTTCTAGGGTTTTTATTGTTTGGGGCTTTACATTGAAGTCTTTAATCCATCTTGAATTAACTTTTCTATAAGCTATAAGGAAGGGGCCCAGGTTCAATTTTCTGCATATGGCTAGCCAGTTCTCCCAGCACCATTTATTACACAGCAAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAATCAGATGGTTGTAGTATATGGTCTTATTTCTGAGTTCTCTATTCTGTTCCATTGGTTTATGTGTCTGTTTTTGTACCAGGACCATGCTGTTTTTCTTACTGTATACAGTATCGTTTGAAGTTGGGTAGCATGATGACTTCGGCTTTATTCTTTTTGCTTAGGATTGTCATGGCTATATGAGCTCTTTTTTGATTTCATATGAATTTTTAAATTGTTTCATGTAATTCTGTGAAGAATGTCAATGGTAGTTTAGCGGGAATAGCATTGGTTCTATAAATTACTTTGGGAAGTATGGTCATTTTCACAATATTGATTCTTTTTATCAGTGAGCATGGAATGTTTTTCTATTTGTTTGTGTCTTCTCTGGTTCTTTTGAGTGGTGGTTCGTAGTTCTCCTTGAAGAGGTCTTTCACTTTCCTTGTTAGCTGTATTCTTAGATATTTTATTCTCTTTGTAGCTATTGTGAATGGGATTTCATTCAAGATTTGGCTCTCTGCTTGTCTGTTGTTGGTGAGTAGGGATGCTTGGAATTTTTGCATGTTGATTTTGTATTCTGAGACTTTGCTGAAGTTGTTTATCAGCTTAAGAAGCTTTTGGGCTGAGACGATGGTGTTTTCTAGATATACGATCATGTCATCTGCAAACAAAGACAATTTGACTTCCTCTCTTCCTATTTGAATACTTTTTATTTCTTTCTCTTTTCTGATTGCCGTAGCCAGAACTTCCAGTACTATGTTGAATAAGAATGAAGAGAGAGGTCATCCTGGTGCCTGTATTCAAGAGGAATGCTTCCAGCTTTTGCCCACTCAGTATGATGTTGGCTGTGGGTTTGTCATATAAGACTCTTATTTTTTTTGAGATATGTTCCTTTAATACCTAAAACTGTTTATCGACAGTTTTTAACATCAAGGGATGTTGAATTTTATTGAAGGCCTTTTCTTCATCTATTGAGATAATCATGTGGTTTTTGTCTTTAGTTCTGATTATGTGATGAATTACATTTATTGATTTGTGTATGTTGAACCAGACTTGCATCCCAGGGCTGAAGCCAACTTGATCATGGTGGATAAGTTTTTTGATGTGCTGCTGGAATCAGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAGTGTTCATCAGGGATATTGGCCTGAAGTTTTTTGTTGTTGTTGTTGTATCTCTACCAGGTTTTGGTAAGAGGATGACACTGGCCTCATCAAATTAATTAGGGAGAAGTCCCTCCTTTCCAACTGTTTGGAATAGTTTCAGTGAAATGGCACCAGCTCCACTTTGTACCTCTGGCAGAATTCAGCTGTAAACCCATCTGGTCTTGGGCTTTTTTTTGTTTGGTAGGCTATTCCTGTGTCCAGGAACTTATCCATTTCTTCTAGATTTTCTGTTTATTTGCATAGAAGTGTTCATAATATTCTCTGATGGTTATTTGTATTTTTGTGGGGCCAGTGATGTTATCCCCTTTATAATTTTTTATTGTGTCTATTTTATTTTTCTCTCTTCTTTGTCAGTCTAGCTAGAGGTCTATTTATTAATTTTTTCAAAAAAAAACAGCTTCTGGATTCATTGATTTTTTTTGCAGGGCTTTTCATGTCTCTATCTTCTTCAGTTCCACTCTGATCTTGGTTATTTCTTGCCTACTGCTAGCTTTGGGGTTTGTTTGCTCTTGGCCATCTAAGTTCTTTTAGTTGTGATGTTAGGATGTTGATTTGAGATCTTTCTTGCTTTTTGATGTAGGCATTTTAGTGCTATAAATTTCCCGCTTAACACTGCTTTAGTTGCATCCCAGAGATTCTGGTACATCATTTGTTCTCATTAGTTTCAAAAACACTTCTTGTTTTCTGCCTTAATTTCATTACTTATCCAGGAGTCATTCAGGAGCAGGTTGTTCAATTGCCATGTAGTTGTGTGATTTTGAGTGAGTTTCTTAATCTTGAGTTCTAATTGGATTACACTGTAGTCTGAGACACTGTTATGATTTCAGTTCTTTTTGCATTTGCTCAGGATTGTTTTACTTTCAACCATGTGATTGATTTTGGAGTAAGTCCCATGTGGCACCAAGAAGAATGTATATTCTGTTGTTTTTGGGTGGAGAGTTCTGTAGATACCTATCAGGTTCATCTGATCCAGAGCTGAGTTCAGGTCCTCAATATCTTTGATAATTTTATGTCTTGATGATCGGTCTAATATTGACAGTGGGGTGTTAAAGTCTCTCACTTTTATTGTGTGGGAGGCTAGCCTCTTTGTAGATCTCTAAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTAGGTGCATGTATATTTAGGATAGTTAGCTCTTCTTGTTGAATTGAACACTTTACCATTATGTAATTCACTTCTTTGTCTTTTTTGATCTTTGTTGGTTTAAAATCTGTTTTGTCAGAAACTAGGATTGCTAACCCCTGTGTTTTCTGCTTTCCATTTGCTTGGTAAATTTTCCTCCATCCCTTTGTGTCTTTGCATGTGAGATGGATCTCTTGAATACAGCACACCATTGGGTCTTGACTCTATCCAGCTTGCCATTCTGTGTCTTTTAATTGGGGCATTTATCCCTTTTACAATTAAGGTTAATATTGTTAAGTGTAAATTTGATCCCATCATCATAATACTAGCTTGTTATTTTGTAGACACGTTACTGTAGTTGCTTCATAGTGTCAGTGGTCTTTGTACTTCAGTATGTTTTTGTAGTGGCTGGTAATAGTTTTTCCTTTCTGTATTTAATACTTCCTTCAGGAGCTCTTGCAAGACAGACCTGTTGGTAGTGAATTCCCTCAGCATTTGCTTGTCTGAAAAGGATTTTATTTCTCTTTCACTTATGAAGCTTAGTTTGGCCAGATACAAAATTCTCGGTTATAAATTCTTTTCTTTAAGATTGCTGAATATTGGTCCCCATTCTCTTCTGGCTTGTAGGGTTACCACTGAGGGGTCCACTGTTAGTCTGATGGGCTTCCCTTTGTATTGAGTCAGTGCAAAATAACTGCAGTTTTTGCTATTTAAAAGTAATGTCATTACTTTAAAATGGCAAATTTTAAAATGTCACTACTTTTAAATGGGAAAAAATGCAGTTTCTTTTGCACCAACCTAATAGATGACCTGGCCTTTCTCTCTGGCTGCACTTAACATTTTTTATTCCATTTTTACCTTGGAGAATCTGATGATTATGTGTCTTGGGTTGATCTTCTCATGGAGTATCTTACTGAGTTTCTCTGGATTTCCTGAATTTGAATGTTGGCCTGTCTTGCTAGGTTGGGAAAGTCCTCCTGGAAGATATCCTGAAGTATGTTTTCCAACCTGGTTTCATTCTCCCCATCTCTTTCAGGTACCTCAATCAGTCATAGGTTTGGTCTTTTTACATGATCCCATAGCTTTTGGAGTTTTTTTCTTTCTTTTTCATTCTTTTTTCTCTAATCTTGTCTGCCTGTCTTATTTCAGCAAGATAGTCTTCAAGCTCTGAAATTCTTTTCTCCACTTAGTATATTGATACTTGTGATGGCATTTTGAAGTTCTCATGTTGTGTTTTTCAGCTCCACCAGGTCATTTATGTTCCTCTCTAAACTGGTTATTCTGGTTAACACCTTCTGTAATGTTTTGTCATGGTTATTAGCTTCTTTGTATTGCGTTAGAACATACCCCTTTAGATCAGCCAAGTTCATTATTACCCACCTTCTGAAGCCTTCTTCTGTGATCAACTCATCCATCTCAGCCTCAACCCAGTTCTGTGCCCTTGCTGCAGATATGTTGCTATCATTTGGAGGAGAAGAGGCAGTCTGGCTGATTGAGTTTTCAGTGTTTTTGCATTGAATCTTTCTCATCTTTGTGGATTTATCTACCTTTGATCTTTGACACTGCTGACCTTTGGATGCAGTTTTTGTAGGCTCTTTTTTGTTGATGTTGTTGTTGTTGCTTTCTGTTTGTTTCTTTTTCTGTTAACAGTCAGGCCCCTCTTCTGTAGGGCTGCTGCAGTTTTCTGGGGTCCACTCCAGACCCTATTCCCCTGGGTCCCACCCCCCCAACCTGTAGGTGTCACCAGTGGAGTCTGAAGAACAGCAAAAATAGCTGCCTGCTCTTTCCTCTGGGAGCTCCATCCCAGAGGGGCACTGACCTGATTCCCACCAAAATGCTCCTGTATATGGTGTCTGGCATACCCTGTTGTGAGGTCTTACCCAGTGAGGAGGCACAGGATCAGTGATCCACTTAAAAAATCAGTCTGGCTGCCCCCTGGTGGAGTAGGTGCGCTGCACTGTGGGGAATACCCCTCATCTTGGCTGCCCGGACTCTTCAAAGCCAGCAGGCAGGAAAGACTAAGTCCATTGAACTGCGGAGACTGCAGCCACCCCTCTTCCCAGGAGCTCCATCCCAGGGAGATCAGAGTTCTGTCCCTAAACCCCTGGCTGGAGTGCTGAAATTCCTATACGGAGGTCCCACGTGGTGAGGAGGGATGGATCCAGGTCCCACCTAAAGAAGCAGTCTGGCCACAATCTGCACAGCTGCTGTGCTGTGCTGTGGGGAATTCCTACTGATCCAAATCACCCAGTCTCCGGGGGCAGGGGACAATGGCTGACCGAAGCAACAGTGATGGCAGTCCCCATTCCTCTCAGAACTCCATCATCTTGGGCAGTCTCCAGCCTGCTGCTGCTGGTCACAACCAGAGCAGCCACCAAGAGTCTGCACAGCTCTGTAATTGGGACCCAAGGCCCTGGTGACAGGGACTTATGAGGGGATCTCTTGCAGTGTGCTTCTTGGCATTATTTACATTTTGATAAGTCAAGAAAAAGTTTTGGATCTTAATATTAATTGTGAATATACTTGAACTTATTTTTCACCTGCATTCACCTCTTGCAATAAATACCTCTCAGCCTAGACTCTCCTTCAAACACCAGTCAAGAGAAAAACCACATTATGATTAGACATGCCTTCATGGGTGCTCTTTCGATCATAAAAATCCAAAATTAAAGGGTAGGTTATTAATTGAATTTCTATGTTTTGTTTTTAGCTACAAAATGACAAATGCATAGTTATGAAAATCATGTTTGAAGAAATTCTGACAAATGCATAGTTATGAAAATCACATTTGAAGAAATTATTTTCATTTTTTCTATTTTAGGACAAGAGTAAAGGTTACTGCTACAGGAACTGTCATCAGTAGTACTTTCTCACATCTCCCTTGCTCTTTGCTTTGTCAAATGGGATTGAGTGTAGAAAAGGTACTTTGCAACAAATGGGGAGTTGGTTGTTCAGTTGCATTCTTCTTTTCCCTGGTGGCTACTTACCATCTGGCAGGTACTCCCGTTGGTGTTGGCTAGGCTCATCTTCCTCAGAGTGGCTGGAAATGTACAACCTGTTACTAAGTGACTGCCAGTAAATAAGGAACTTCTCTCATTTCCCATTCTGCTTTGGTTGCCAAATGAATACATTACTTTAATATCTAAAAGCCTTTACCAGCTGCTGGGTTCTATTATTTCCCATTGTGATTACCTGAACTTCCCAGCTCCCATATTGTTCTGCCATTTTCACAGTGGGGTCCCCAGAGACGCTGCACAAAAATCTCAGAACTATTGCCTCTGAAGCTTTATGAAGCCAAAGCAGTCCAATTTTCCATAGTCCACAAACTACAACATCCTGGCAAACTGGCCTCTCATCCAAAGGTTTTTCTTCCCAGTAAGTTTTGTAACACTCCCTAATGCTCTTCTTGTTGA	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4276:HG2_10X_allpass_1199:HG4_10X_allpass_1406:HG2_Ill_Krunchall_10223:HG4_PB_pbsv_7072:HG4_Ill_MetaSV_4584:HG2_PB_pbsv_7075:HG2_PB_SVrefine2PBcRplusDovetail_9625:HG2_PB_SVrefine2Falcon1plusDovetail_10341:HG2_PB_HySA_13097:HG2_Ill_MetaSV_4398:HG2_10X_SVrefine210Xhap12_5043:HG2_Ill_tnscope_837:HG4_PB_SVrefine2Falcon1Dovetail_4270;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5043:HG2_Ill_MetaSV_4398:HG2_PB_HySA_13097:HG2_PB_SVrefine2Falcon1plusDovetail_10341:HG2_PB_SVrefine2PBcRplusDovetail_9625:HG2_PB_pbsv_7075:HG4_Ill_MetaSV_4584:HG4_PB_pbsv_7072;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00480316;ClusterMaxSizeDiff=0.00480316;ClusterMaxEditDist=0.00480316;PBcalls=7;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-11650;DistBack=20252;DistForward=-8751;DistMin=-8751;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=6:87406192-87417848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:75:1|0:1:26:36:1:./.:0:0:0:0:0/1:59:22:0/1:445:262:11707:.:.
chr6	88118173	HG2_PB_assemblyticsfalcon_23365	TGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGCGCGCACACAGATCCGGAGC	T	20	PASS	ClusterIDs=HG2_10X_allpass_1200:HG2_Ill_Krunchall_10234:HG4_Ill_Krunchall_10557:HG4_PB_assemblyticsfalcon_22745:HG4_PB_pbsv_7077:HG2_PB_pbsv_7079:HG4_PB_SVrefine2PBcRDovetail_3496:HG4_PB_SVrefine2Falcon1Dovetail_4271:HG4_Ill_svaba_9263:HG4_Ill_manta_1777:HG4_Ill_MetaSV_4585:HG4_Ill_GATKHCSBGrefine_5005:HG4_10X_allpass_1407:HG2_PB_assemblyticsfalcon_23365:HG2_PB_assemblyticsPBcR_22594:HG2_PB_SVrefine2PBcRplusDovetail_9626:HG2_PB_SVrefine2PB10Xhap12_5172:HG2_PB_SVrefine2Falcon2Bionano_3559:HG2_PB_SVrefine2Falcon1plusDovetail_10343:HG2_PB_HySA_13110:HG2_Ill_svaba_9177:HG2_Ill_breakscan11_1033:HG2_Ill_SpiralSDKrefine_14893:HG2_Ill_SVrefine2DISCOVARplusDovetail_11301:HG2_Ill_MetaSV_4399:HG2_Ill_GATKHCSBGrefine_4934;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_1200:HG4_PB_SVrefine2PBcRDovetail_3496:HG4_PB_SVrefine2Falcon1Dovetail_4271:HG4_Ill_svaba_9263:HG4_Ill_manta_1777:HG4_Ill_MetaSV_4585:HG4_Ill_GATKHCSBGrefine_5005:HG4_10X_allpass_1407:HG2_PB_assemblyticsfalcon_23365:HG2_PB_assemblyticsPBcR_22594:HG2_PB_SVrefine2PBcRplusDovetail_9626:HG2_PB_SVrefine2PB10Xhap12_5172:HG2_PB_SVrefine2Falcon2Bionano_3559:HG2_PB_SVrefine2Falcon1plusDovetail_10343:HG2_PB_HySA_13110:HG2_Ill_svaba_9177:HG2_Ill_breakscan11_1033:HG2_Ill_SpiralSDKrefine_14893:HG2_Ill_SVrefine2DISCOVARplusDovetail_11301:HG2_Ill_MetaSV_4399:HG2_Ill_GATKHCSBGrefine_4934;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0226415;ClusterMaxSizeDiff=0.0226415;ClusterMaxEditDist=0.030303;PBcalls=12;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-133;DistBack=-46;DistForward=76078;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=22;REFWIDENED=6:88118174-88118328;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3448.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:36:0|1:40:2:2:33:./.:0:0:0:0:0/1:40:11:./.:.:.:.:.:.
chr6	88460708	HG4_Ill_svaba_9265	CGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTCGCCT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9359:HG4_PB_assemblyticsfalcon_22746:HG3_PB_assemblyticsfalcon_23227:HG2_PB_assemblyticsfalcon_23366:HG2_PB_assemblyticsPBcR_22596:HG2_Ill_250bpfermikitraw_9949:HG2_PB_HySA_13112:HG4_PB_pbsv_7080:HG4_Ill_svaba_9265:HG4_Ill_Krunchall_10558:HG4_Ill_GATKHC_11904:HG4_Ill_GATKHCSBGrefine_5008:HG4_Ill_250bpfermikitraw_9961:HG4_Ill_150bpfermikitraw_9550:HG3_PB_pbsv_6874:HG3_Ill_svaba_9248:HG3_Ill_Krunchall_9975:HG3_Ill_GATKHC_11811:HG3_Ill_GATKHCSBGrefine_4882:HG3_Ill_250bpfermikitraw_9630:HG3_Ill_150bpfermikitraw_9391:HG2_PB_pbsv_7081:HG2_Ill_svaba_9179:HG2_Ill_Krunchall_10235:HG2_Ill_GATKHC_11866:HG2_Ill_GATKHCSBGrefine_4936:HG2_Ill_250bpfermikitraw_9948;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9359:HG4_PB_pbsv_7080:HG4_Ill_svaba_9265:HG4_Ill_Krunchall_10558:HG4_Ill_GATKHC_11904:HG4_Ill_GATKHCSBGrefine_5008:HG4_Ill_250bpfermikitraw_9961:HG4_Ill_150bpfermikitraw_9550:HG3_PB_pbsv_6874:HG3_Ill_svaba_9248:HG3_Ill_Krunchall_9975:HG3_Ill_GATKHC_11811:HG3_Ill_GATKHCSBGrefine_4882:HG3_Ill_250bpfermikitraw_9630:HG3_Ill_150bpfermikitraw_9391:HG2_PB_pbsv_7081:HG2_Ill_svaba_9179:HG2_Ill_Krunchall_10235:HG2_Ill_GATKHC_11866:HG2_Ill_GATKHCSBGrefine_4936:HG2_Ill_250bpfermikitraw_9948;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.137255;PBcalls=8;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=-161;DistForward=7759;DistMin=-161;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:88460707-88460761;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:66:1/1:2:27:4:25:./.:0:0:0:0:1/1:1:21:./.:.:.:.:.:.
chr6	88651308	HG2_Ill_breakscan11_1034	TTTTTTGGCACTGCCTTGAGTAGATGTAATCTCTACCCTTTGCTAGAAAACAGAAATGGAAATAATATGAAGA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_7083:HG4_PB_HySA_10457:HG2_PB_assemblyticsPBcR_22598:HG4_Ill_svaba_9268:HG4_Ill_scalpel_6881:HG4_Ill_manta_1778:HG4_Ill_Krunchall_10562:HG4_Ill_GATKHC_11907:HG4_Ill_GATKHCSBGrefine_5010:HG4_Ill_250bpfermikitraw_9964:HG4_Ill_150bpfermikitraw_9553:HG4_10X_allpass_1410:HG2_Ill_svaba_9182:HG2_Ill_scalpel_7051:HG2_Ill_manta_2045:HG2_Ill_breakscan11_1034:HG2_Ill_SpiralSDKrefine_14895:HG2_Ill_Krunchall_10238:HG2_Ill_GATKHC_11870:HG2_Ill_GATKHCSBGrefine_4938:HG2_Ill_250bpfermikitraw_9952:HG2_Ill_150bpfermikitraw_9362:HG4_Ill_Spiral_590:HG2_PB_HySA_13116:HG2_Ill_Spiral_512:HG4_PB_pbsv_7082;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9362:HG2_Ill_250bpfermikitraw_9952:HG2_Ill_GATKHCSBGrefine_4938:HG2_Ill_GATKHC_11870:HG2_Ill_Krunchall_10238:HG2_Ill_SpiralSDKrefine_14895:HG2_Ill_breakscan11_1034:HG2_Ill_manta_2045:HG2_Ill_scalpel_7051:HG2_Ill_svaba_9182:HG4_10X_allpass_1410:HG4_Ill_150bpfermikitraw_9553:HG4_Ill_250bpfermikitraw_9964:HG4_Ill_GATKHCSBGrefine_5010:HG4_Ill_GATKHC_11907:HG4_Ill_Krunchall_10562:HG4_Ill_manta_1778:HG4_Ill_scalpel_6881:HG4_Ill_svaba_9268;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0551724;PBcalls=5;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-72;DistBack=45330;DistForward=41683;DistMin=41683;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=22;REFWIDENED=6:88651289-88651382;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3450.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:25:0|1:28:1:2:23:./.:0:0:0:0:0/1:36:22:./.:.:.:.:.:.
chr6	89424152	HG2_PB_SVrefine2Falcon1plusDovetail_10347	GTAAAAGTACTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9630:HG2_PB_HySA_13121:HG4_PB_assemblyticsfalcon_22754:HG3_PB_assemblyticsfalcon_23233:HG2_PB_assemblyticsfalcon_23374:HG4_Ill_Krunchall_10569:HG3_Ill_Krunchall_9986:HG2_Ill_Krunchall_10244:HG3_PB_HySA_10856:HG4_PB_pbsv_7084:HG3_PB_pbsv_6877:HG2_PB_pbsv_7085:HG4_PB_HySA_10463:HG4_Ill_MetaSV_4589:HG2_Ill_tnscope_839:HG2_Ill_MetaSV_4402:HG4_PB_SVrefine2PBcRDovetail_3499:HG4_PB_SVrefine2Falcon1Dovetail_4273:HG4_Ill_scalpel_6883:HG4_Ill_manta_1779:HG3_PB_SVrefine2PBcRDovetail_3264:HG3_PB_SVrefine2Falcon1Dovetail_4278:HG3_Ill_scalpel_7138:HG3_Ill_manta_1683:HG3_Ill_MetaSV_4582:HG3_10X_allpass_1458:HG2_PB_SVrefine2PB10Xhap12_5176:HG2_PB_SVrefine2Falcon2Bionano_3563:HG2_PB_SVrefine2Falcon1plusDovetail_10347:HG2_Ill_scalpel_7054:HG2_Ill_manta_2047:HG2_10X_allpass_1202:HG2_10X_SVrefine210Xhap12_5056:HG4_Ill_Spiral_591:HG3_Ill_Spiral_7798:HG2_Ill_Spiral_513:HG4_Ill_GATKHCSBGrefine_5014:HG3_Ill_GATKHCSBGrefine_4888:HG2_Ill_GATKHCSBGrefine_4943:HG2_PB_assemblyticsPBcR_22602;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5056:HG2_10X_allpass_1202:HG2_Ill_manta_2047:HG2_Ill_scalpel_7054:HG2_PB_SVrefine2Falcon1plusDovetail_10347:HG2_PB_SVrefine2Falcon2Bionano_3563:HG2_PB_SVrefine2PB10Xhap12_5176:HG3_10X_allpass_1458:HG3_Ill_MetaSV_4582:HG3_Ill_manta_1683:HG3_Ill_scalpel_7138:HG3_PB_SVrefine2Falcon1Dovetail_4278:HG3_PB_SVrefine2PBcRDovetail_3264:HG4_Ill_manta_1779:HG4_Ill_scalpel_6883:HG4_PB_SVrefine2Falcon1Dovetail_4273:HG4_PB_SVrefine2PBcRDovetail_3499;NumExactMatchSVs=17;ClusterMaxShiftDist=0.186916;ClusterMaxSizeDiff=0.186916;ClusterMaxEditDist=0.190625;PBcalls=18;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-308;DistBack=16263;DistForward=-295;DistMin=-295;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:89424153-89424474;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:32:0|1:24:0:0:29:./.:0:0:0:0:0/1:35:19:0/1:31:11:.:.:.
chr6	89921753	HG3_Ill_MetaSV_4583	ACTGGACAGCTGTCTCTGGGTATCTTGCAAGCACATCTAGGTCCATATGTTCATACCAAACTCATCACCTTCACCCCCAAACCTAATCCTCCACCTGCTCTCCTTCCTGGCATCACCATCTACTCAGTCGTACAATCCAAAGACCTGCCGAACATTCACCCTAAACTTCTCTCTCACCCTGAAGCCAATCAGATTCTGACCATTCTAGCTCCTTGAAAGCTCTCATATTCATTCCTCCCCCATCCCCATCCTGTTCATTCCACTATGAATGAGCTTTGCACCAGCTCTTACCTGGCCTCAGACTCTGGTCATAGACTCTGGATTACTTTCTCTGTTTCCCCTCTATCCCCCTTCCTGGTGTTCCATCATGCTGCTGAGCAAGCAAGCATCGTCTCTCTGAAATGGAAATCTGCTGAGACCATTC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_7087:HG3_PB_pbsv_6879:HG4_Ill_Cortex_3210:HG3_Ill_Cortex_3228:HG2_Ill_Cortex_7841:HG2_10X_allpass_1203:HG3_PB_HySA_10860:HG4_PB_SVrefine2PBcRDovetail_3501:HG4_PB_SVrefine2Falcon1Dovetail_4275:HG4_Ill_scalpel_6885:HG4_Ill_manta_1780:HG4_Ill_SVrefine2DISCOVARDovetail_5252:HG4_Ill_GATKHCSBGrefine_5017:HG4_10X_allpass_1411:HG3_PB_SVrefine2PBcRDovetail_3266:HG3_PB_SVrefine2Falcon1Dovetail_4281:HG3_Ill_manta_1684:HG3_Ill_SVrefine2DISCOVARDovetail_5373:HG3_Ill_MetaSV_4583:HG3_Ill_GATKHCSBGrefine_4891:HG3_10X_allpass_1459:HG2_PB_assemblyticsfalcon_23377:HG2_PB_assemblyticsPBcR_22605:HG2_PB_SVrefine2PBcRplusDovetail_9632:HG2_PB_SVrefine2PB10Xhap12_5179:HG2_PB_SVrefine2Falcon2Bionano_3565:HG2_PB_SVrefine2Falcon1plusDovetail_10349:HG2_Ill_scalpel_7055:HG2_Ill_manta_2048:HG2_Ill_SpiralSDKrefine_14904:HG2_Ill_SVrefine2DISCOVARplusDovetail_11307:HG2_Ill_GATKHCSBGrefine_4947:HG2_10X_SVrefine210Xhap12_5058:HG4_Ill_Krunchall_10574:HG3_Ill_Krunchall_9989:HG2_Ill_Krunchall_10248:HG4_Ill_Spiral_592:HG4_Ill_MetaSV_4590:HG3_Ill_Spiral_7801:HG2_PB_HySA_13129:HG2_Ill_tnscope_840:HG2_Ill_Spiral_514:HG2_Ill_MetaSV_4403:HG4_PB_assemblyticsfalcon_22758:HG3_PB_assemblyticsfalcon_23239:HG2_PB_pbsv_7087;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5058:HG2_Ill_GATKHCSBGrefine_4947:HG2_Ill_SVrefine2DISCOVARplusDovetail_11307:HG2_Ill_SpiralSDKrefine_14904:HG2_Ill_manta_2048:HG2_Ill_scalpel_7055:HG2_PB_SVrefine2Falcon1plusDovetail_10349:HG2_PB_SVrefine2Falcon2Bionano_3565:HG2_PB_SVrefine2PB10Xhap12_5179:HG2_PB_SVrefine2PBcRplusDovetail_9632:HG2_PB_assemblyticsPBcR_22605:HG2_PB_assemblyticsfalcon_23377:HG3_10X_allpass_1459:HG3_Ill_GATKHCSBGrefine_4891:HG3_Ill_MetaSV_4583:HG3_Ill_SVrefine2DISCOVARDovetail_5373:HG3_Ill_manta_1684:HG3_PB_SVrefine2Falcon1Dovetail_4281:HG3_PB_SVrefine2PBcRDovetail_3266:HG4_10X_allpass_1411:HG4_Ill_GATKHCSBGrefine_5017:HG4_Ill_SVrefine2DISCOVARDovetail_5252:HG4_Ill_manta_1780:HG4_Ill_scalpel_6885:HG4_PB_SVrefine2Falcon1Dovetail_4275:HG4_PB_SVrefine2PBcRDovetail_3501;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0164512;ClusterMaxSizeDiff=0.0164512;ClusterMaxEditDist=0.0164512;PBcalls=17;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-423;DistBack=2882;DistForward=1402;DistMin=1402;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:89921754-89922176;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3452.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:1/1:0:15:0:9:./.:0:0:0:0:1/1:0:34:0/1:9:19:.:.:.
chr6	90961201	HG3_Ill_250bpfermikitraw_9652	ACTCAGTACTCTGAAAACCATTAGTTTAGCACATACCCAGCACCTGCTTGACACATCTTAATCAACACTCTTTTGCTAGTCATAT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_7093:HG2_PB_HySA_13137:HG3_PB_assemblyticsfalcon_23251:HG2_Ill_SpiralSDKrefine_14912:HG3_PB_SVrefine2PBcRDovetail_3272:HG4_Ill_SVrefine2DISCOVARDovetail_5255:HG4_Ill_Cortex_3212:HG3_PB_SVrefine2Falcon1Dovetail_4286:HG3_Ill_SVrefine2DISCOVARDovetail_5378:HG3_Ill_Cortex_3230:HG2_PB_assemblyticsfalcon_23388:HG2_PB_assemblyticsPBcR_22616:HG2_PB_SVrefine2PBcRplusDovetail_9637:HG2_PB_SVrefine2PB10Xhap12_5184:HG2_PB_SVrefine2Falcon2Bionano_3570:HG2_PB_SVrefine2Falcon1plusDovetail_10354:HG2_PB_PB10Xdip_26163:HG2_Ill_SVrefine2DISCOVARplusDovetail_11312:HG2_Ill_Cortex_7845:HG2_10X_SVrefine210Xhap12_5065:HG4_Ill_Spiral_594:HG3_Ill_Spiral_7808:HG2_Ill_Spiral_515:HG4_PB_SVrefine2PBcRDovetail_3506:HG4_10X_allpass_1413:HG3_10X_allpass_1460:HG2_10X_allpass_1204:HG3_PB_pbsv_6886:HG4_Ill_svaba_9284:HG4_Ill_manta_1781:HG4_Ill_Krunchall_10582:HG4_Ill_GATKHC_11927:HG4_Ill_GATKHCSBGrefine_5020:HG4_Ill_250bpfermikitraw_9984:HG4_Ill_150bpfermikitraw_9574:HG4_CG_vcfBeta_4688:HG3_Ill_svaba_9264:HG3_Ill_manta_1685:HG3_Ill_Krunchall_9996:HG3_Ill_GATKHC_11837:HG3_Ill_GATKHCSBGrefine_4893:HG3_Ill_250bpfermikitraw_9652:HG3_Ill_150bpfermikitraw_9410:HG3_CG_vcfBeta_4009:HG2_Ill_svaba_9199:HG2_Ill_scalpel_7062:HG2_Ill_manta_2050:HG2_Ill_Krunchall_10259:HG2_Ill_GATKHC_11891:HG2_Ill_GATKHCSBGrefine_4950:HG2_Ill_250bpfermikitraw_9973:HG2_Ill_150bpfermikitraw_9381:HG2_CG_vcfBeta_4209:HG2_PB_pbsv_7093:HG3_PB_HySA_10876;NumClusterSVs=55;ExactMatchIDs=HG2_CG_vcfBeta_4209:HG2_Ill_150bpfermikitraw_9381:HG2_Ill_250bpfermikitraw_9973:HG2_Ill_GATKHCSBGrefine_4950:HG2_Ill_GATKHC_11891:HG2_Ill_Krunchall_10259:HG2_Ill_manta_2050:HG2_Ill_scalpel_7062:HG2_Ill_svaba_9199:HG3_CG_vcfBeta_4009:HG3_Ill_150bpfermikitraw_9410:HG3_Ill_250bpfermikitraw_9652:HG3_Ill_GATKHCSBGrefine_4893:HG3_Ill_GATKHC_11837:HG3_Ill_Krunchall_9996:HG3_Ill_manta_1685:HG3_Ill_svaba_9264:HG4_CG_vcfBeta_4688:HG4_Ill_150bpfermikitraw_9574:HG4_Ill_250bpfermikitraw_9984:HG4_Ill_GATKHCSBGrefine_5020:HG4_Ill_GATKHC_11927:HG4_Ill_Krunchall_10582:HG4_Ill_manta_1781:HG4_Ill_svaba_9284;NumExactMatchSVs=25;ClusterMaxShiftDist=0.342541;ClusterMaxSizeDiff=0.342541;ClusterMaxEditDist=0.353591;PBcalls=16;Illcalls=32;TenXcalls=4;CGcalls=3;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=3;HG2count=24;HG3count=17;HG4count=14;NumTechs=4;NumTechsExact=2;SVLEN=-84;DistBack=75055;DistForward=79043;DistMin=75055;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:90961200-90961286;PctSeqSimilarity=0.8947;PctSizeSimilarity=0.8077;PctRecOverlap=0.8095;SizeDiff=-20;StartDistance=0;EndDistance=-20;GTMatch=1;TruScore=83;MatchId=3453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:1/1:./.:8:49:./.:1:2:0:4:./.:0:0:0:0:0/1:7:42:./.:.:.:.:.:.
chr6	91237575	HG2_10X_SVrefine210Xhap12_5067	TTCATAAGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_9638:HG2_PB_assemblyticsfalcon_23392:HG3_PB_assemblyticsfalcon_23254:HG4_PB_assemblyticsfalcon_22775:HG4_PB_SVrefine2Falcon1Dovetail_4281:HG3_PB_pbsv_6888:HG2_PB_pbsv_7094:HG2_Ill_breakscan11_1036:HG3_PB_SVrefine2Falcon1Dovetail_4287:HG3_Ill_scalpel_7147:HG3_Ill_MetaSV_4588:HG3_Ill_GATKHCSBGrefine_4895:HG3_10X_allpass_1461:HG2_PB_SVrefine2Falcon1plusDovetail_10355:HG2_Ill_manta_2051:HG2_Ill_GATKHCSBGrefine_4951:HG2_10X_allpass_1205:HG2_10X_SVrefine210Xhap12_5067:HG2_Ill_tnscope_842:HG2_Ill_MetaSV_4406:HG3_PB_SVrefine2PBcRDovetail_3274:HG2_PB_assemblyticsPBcR_22620;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5067:HG2_10X_allpass_1205:HG2_Ill_GATKHCSBGrefine_4951:HG2_Ill_manta_2051:HG2_PB_SVrefine2Falcon1plusDovetail_10355:HG3_10X_allpass_1461:HG3_Ill_GATKHCSBGrefine_4895:HG3_Ill_MetaSV_4588:HG3_Ill_scalpel_7147:HG3_PB_SVrefine2Falcon1Dovetail_4287;NumExactMatchSVs=10;ClusterMaxShiftDist=0.245665;ClusterMaxSizeDiff=0.245665;ClusterMaxEditDist=0.245665;PBcalls=11;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=71338;DistForward=-260;DistMin=-260;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:91237576-91237911;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3454.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:32:0|1:32:1:3:28:./.:0:0:0:0:0/1:31:18:./.:36:3:.:.:.
chr6	92807994	HG4_10X_allpass_1414	TTAGCCAGGATAGTCTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGTGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCATCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_843:HG2_PB_assemblyticsPBcR_22629:HG4_PB_assemblyticsfalcon_22782:HG4_Ill_Krunchall_10593:HG2_Ill_Krunchall_10270:HG4_PB_HySA_10487:HG2_PB_HySA_13151:HG2_PB_pbsv_7100:HG4_PB_pbsv_7099:HG4_PB_SVrefine2PBcRDovetail_3509:HG4_PB_SVrefine2Falcon1Dovetail_4283:HG4_Ill_scalpel_6897:HG4_Ill_manta_1782:HG4_Ill_SVrefine2DISCOVARDovetail_5261:HG4_Ill_GATKHCSBGrefine_5024:HG4_10X_allpass_1414:HG3_PB_assemblyticsfalcon_23260:HG3_PB_SVrefine2Falcon1Dovetail_4291:HG2_PB_assemblyticsfalcon_23399:HG2_PB_SVrefine2PBcRplusDovetail_9641:HG2_PB_SVrefine2PB10Xhap12_5189:HG2_PB_SVrefine2Falcon1plusDovetail_10359:HG2_Ill_manta_2052:HG2_Ill_breakscan11_1037:HG2_Ill_MetaSV_4409:HG2_Ill_GATKHCSBGrefine_4956:HG2_10X_allpass_1206:HG2_10X_SVrefine210Xhap12_5073:HG4_Ill_MetaSV_4595;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5073:HG2_10X_allpass_1206:HG2_Ill_GATKHCSBGrefine_4956:HG2_Ill_MetaSV_4409:HG2_Ill_breakscan11_1037:HG2_Ill_manta_2052:HG2_PB_SVrefine2Falcon1plusDovetail_10359:HG2_PB_SVrefine2PB10Xhap12_5189:HG2_PB_SVrefine2PBcRplusDovetail_9641:HG2_PB_assemblyticsfalcon_23399:HG3_PB_SVrefine2Falcon1Dovetail_4291:HG3_PB_assemblyticsfalcon_23260:HG4_10X_allpass_1414:HG4_Ill_GATKHCSBGrefine_5024:HG4_Ill_SVrefine2DISCOVARDovetail_5261:HG4_Ill_manta_1782:HG4_Ill_scalpel_6897:HG4_PB_SVrefine2Falcon1Dovetail_4283:HG4_PB_SVrefine2PBcRDovetail_3509;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0971787;ClusterMaxSizeDiff=0.0971787;ClusterMaxEditDist=0.0971787;PBcalls=14;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-327;DistForward=-281;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:92807995-92808336;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:42:./.:18:6:11:24:./.:0:0:0:0:0/1:41:17:0/1:27:4:.:.:.
chr6	92910652	HG2_Ill_manta_2053	GAAAAAGTTAGAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCCACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_516:HG4_Ill_Krunchall_10594:HG2_PB_pbsv_7101:HG2_PB_assemblyticsPBcR_22630:HG2_PB_assemblyticsfalcon_23400:HG2_PB_HySA_13152:HG4_Ill_MetaSV_4596:HG2_Ill_tnscope_844:HG2_Ill_MetaSV_4410:HG3_PB_assemblyticsfalcon_23261:HG4_PB_SVrefine2Falcon1Dovetail_4284:HG4_Ill_manta_1783:HG4_Ill_SVrefine2DISCOVARDovetail_5262:HG4_Ill_GATKHCSBGrefine_5025:HG4_10X_allpass_1415:HG2_PB_SVrefine2PBcRplusDovetail_9642:HG2_PB_SVrefine2Falcon1plusDovetail_10360:HG2_Ill_manta_2053:HG2_Ill_breakscan11_1038:HG2_Ill_SVrefine2DISCOVARplusDovetail_11320:HG2_Ill_GATKHCSBGrefine_4957:HG2_10X_allpass_1207:HG2_10X_SVrefine210Xhap12_5074:HG4_PB_pbsv_7100:HG4_Ill_Spiral_595;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5074:HG2_10X_allpass_1207:HG2_Ill_GATKHCSBGrefine_4957:HG2_Ill_SVrefine2DISCOVARplusDovetail_11320:HG2_Ill_breakscan11_1038:HG2_Ill_manta_2053:HG2_PB_SVrefine2Falcon1plusDovetail_10360:HG2_PB_SVrefine2PBcRplusDovetail_9642:HG4_10X_allpass_1415:HG4_Ill_GATKHCSBGrefine_5025:HG4_Ill_SVrefine2DISCOVARDovetail_5262:HG4_Ill_manta_1783:HG4_PB_SVrefine2Falcon1Dovetail_4284;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0974843;ClusterMaxSizeDiff=0.0974843;ClusterMaxEditDist=0.0974843;PBcalls=9;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=102320;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:92910653-92910990;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:32:0|1:36:0:1:31:./.:0:0:0:0:0/1:31:19:0/1:26:9:.:.:.
chr6	93834951	HG2_Ill_Krunchall_10275	GTTATCTTCAACGAGGAGAAGGCACACTGCTCCATGGCTCATTTCTGTCCACACCAGCAGTCC	G	20	PASS	ClusterIDs=HG3_PB_pbsv_6898:HG4_CG_vcfBeta_4699:HG3_CG_vcfBeta_4019:HG2_CG_vcfBeta_4213:HG4_Ill_svaba_9295:HG4_Ill_Krunchall_10600:HG4_Ill_GATKHC_11944:HG4_Ill_GATKHCSBGrefine_5026:HG4_Ill_250bpfermikitraw_9999:HG4_Ill_150bpfermikitraw_9591:HG3_Ill_svaba_9280:HG3_Ill_scalpel_7160:HG3_Ill_Krunchall_10017:HG3_Ill_GATKHC_11863:HG3_Ill_GATKHCSBGrefine_4903:HG3_Ill_250bpfermikitraw_9674:HG3_Ill_150bpfermikitraw_9431:HG2_Ill_svaba_9211:HG2_Ill_Krunchall_10275:HG2_Ill_GATKHC_11914:HG2_Ill_GATKHCSBGrefine_4958:HG2_Ill_250bpfermikitraw_9991:HG2_Ill_150bpfermikitraw_9401:HG2_10X_allpass_1208:HG4_Ill_manta_1784:HG3_Ill_manta_1690:HG2_Ill_manta_2054:HG2_Ill_SpiralSDKrefine_14924:HG4_Ill_Spiral_596:HG3_Ill_Spiral_7821:HG2_Ill_Spiral_517:HG4_PB_HySA_10493:HG4_PB_pbsv_7103:HG2_PB_pbsv_7104:HG2_PB_HySA_13157:HG2_PB_assemblyticsfalcon_23407:HG2_PB_assemblyticsPBcR_22634;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_1208:HG2_Ill_150bpfermikitraw_9401:HG2_Ill_250bpfermikitraw_9991:HG2_Ill_GATKHCSBGrefine_4958:HG2_Ill_GATKHC_11914:HG2_Ill_Krunchall_10275:HG2_Ill_svaba_9211:HG3_Ill_150bpfermikitraw_9431:HG3_Ill_250bpfermikitraw_9674:HG3_Ill_GATKHCSBGrefine_4903:HG3_Ill_GATKHC_11863:HG3_Ill_Krunchall_10017:HG3_Ill_scalpel_7160:HG3_Ill_svaba_9280:HG4_Ill_150bpfermikitraw_9591:HG4_Ill_250bpfermikitraw_9999:HG4_Ill_GATKHCSBGrefine_5026:HG4_Ill_GATKHC_11944:HG4_Ill_Krunchall_10600:HG4_Ill_svaba_9295;NumExactMatchSVs=20;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.25;ClusterMaxEditDist=0.25;PBcalls=7;Illcalls=26;TenXcalls=1;CGcalls=3;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=11;NumTechs=4;NumTechsExact=2;SVLEN=-62;DistBack=26288;DistForward=3644;DistMin=3644;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:93834950-93835015;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:38:0|1:28:8:5:28:./.:0:0:0:0:0/1:22:16:./.:.:.:.:.:.
chr6	94397505	HG3_Ill_250bpfermikitraw_9676	AAAAAAATAATTATGCTCAACTAGGATTTATCCCAGAGACGCAAGAACAGTTCAACATATGC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_6900:HG2_PB_assemblyticsPBcR_22636:HG2_PB_HySA_13159:HG3_PB_assemblyticsfalcon_23267:HG4_PB_assemblyticsfalcon_22789:HG4_PB_SVrefine2PBcRDovetail_3511:HG4_Ill_svaba_9301:HG4_Ill_scalpel_6906:HG4_Ill_manta_1785:HG4_Ill_SVrefine2DISCOVARDovetail_5264:HG4_Ill_Krunchall_10606:HG4_Ill_GATKHC_11949:HG4_Ill_GATKHCSBGrefine_5027:HG4_Ill_250bpfermikitraw_10004:HG4_Ill_150bpfermikitraw_9596:HG4_CG_vcfBeta_4702:HG4_10X_allpass_1416:HG3_PB_SVrefine2PBcRDovetail_3281:HG3_PB_SVrefine2Falcon1Dovetail_4294:HG3_Ill_svaba_9282:HG3_Ill_scalpel_7161:HG3_Ill_manta_1691:HG3_Ill_SVrefine2DISCOVARDovetail_5395:HG3_Ill_Krunchall_10019:HG3_Ill_GATKHC_11865:HG3_Ill_GATKHCSBGrefine_4904:HG3_Ill_250bpfermikitraw_9676:HG3_Ill_150bpfermikitraw_9433:HG3_CG_vcfBeta_4021:HG3_10X_allpass_1464:HG2_PB_assemblyticsfalcon_23409:HG2_PB_SVrefine2PBcRplusDovetail_9644:HG2_PB_SVrefine2PB10Xhap12_5192:HG2_PB_SVrefine2Falcon2Bionano_3575:HG2_Ill_svaba_9213:HG2_Ill_scalpel_7076:HG2_Ill_manta_2055:HG2_Ill_SpiralSDKrefine_14926:HG2_Ill_SVrefine2DISCOVARplusDovetail_11323:HG2_Ill_Krunchall_10277:HG2_Ill_GATKHC_11916:HG2_Ill_GATKHCSBGrefine_4959:HG2_Ill_250bpfermikitraw_9993:HG2_Ill_150bpfermikitraw_9403:HG2_CG_vcfBeta_4215:HG2_10X_SVrefine210Xhap12_5076:HG2_Ill_breakscan11_1039:HG4_Ill_Spiral_597:HG3_PB_HySA_10896:HG2_Ill_Spiral_518:HG4_PB_pbsv_7105:HG2_PB_pbsv_7106;NumClusterSVs=52;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5076:HG2_CG_vcfBeta_4215:HG2_Ill_150bpfermikitraw_9403:HG2_Ill_250bpfermikitraw_9993:HG2_Ill_GATKHCSBGrefine_4959:HG2_Ill_GATKHC_11916:HG2_Ill_Krunchall_10277:HG2_Ill_SVrefine2DISCOVARplusDovetail_11323:HG2_Ill_SpiralSDKrefine_14926:HG2_Ill_manta_2055:HG2_Ill_scalpel_7076:HG2_Ill_svaba_9213:HG2_PB_SVrefine2Falcon2Bionano_3575:HG2_PB_SVrefine2PB10Xhap12_5192:HG2_PB_SVrefine2PBcRplusDovetail_9644:HG2_PB_assemblyticsfalcon_23409:HG3_10X_allpass_1464:HG3_CG_vcfBeta_4021:HG3_Ill_150bpfermikitraw_9433:HG3_Ill_250bpfermikitraw_9676:HG3_Ill_GATKHCSBGrefine_4904:HG3_Ill_GATKHC_11865:HG3_Ill_Krunchall_10019:HG3_Ill_SVrefine2DISCOVARDovetail_5395:HG3_Ill_manta_1691:HG3_Ill_scalpel_7161:HG3_Ill_svaba_9282:HG3_PB_SVrefine2Falcon1Dovetail_4294:HG3_PB_SVrefine2PBcRDovetail_3281:HG4_10X_allpass_1416:HG4_CG_vcfBeta_4702:HG4_Ill_150bpfermikitraw_9596:HG4_Ill_250bpfermikitraw_10004:HG4_Ill_GATKHCSBGrefine_5027:HG4_Ill_GATKHC_11949:HG4_Ill_Krunchall_10606:HG4_Ill_SVrefine2DISCOVARDovetail_5264:HG4_Ill_manta_1785:HG4_Ill_scalpel_6906:HG4_Ill_svaba_9301:HG4_PB_SVrefine2PBcRDovetail_3511;NumExactMatchSVs=41;ClusterMaxShiftDist=0.0826446;ClusterMaxSizeDiff=0.0826446;ClusterMaxEditDist=0.168067;PBcalls=15;Illcalls=31;TenXcalls=3;CGcalls=3;PBexactcalls=7;Illexactcalls=28;TenXexactcalls=3;CGexactcalls=3;HG2count=21;HG3count=16;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-61;DistBack=23033;DistForward=107260;DistMin=23033;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=6:94397506-94397569;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:33:./.:1:1:0:2:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr6	94657363	HG4_Ill_250bpfermikitraw_10008	CATGAAATCTCCAACACTTACTGCAGTAGCTTTTTAATTGGCATTCTTACATTCGCTCATCACTATCCGTTCTGTGCTCCTTGCTTCCATACTATAGACACAGAGGTCATTTTGAAGCAGACATTCATTCTCTGTTTAAAACCTTTCAGTGGTCACCCACTGATGGAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1040:HG4_Ill_Krunchall_10610:HG2_Ill_Krunchall_10281:HG2_PB_assemblyticsfalcon_23411:HG2_PB_assemblyticsPBcR_22638:HG4_PB_assemblyticsfalcon_22792:HG3_PB_assemblyticsfalcon_23270:HG4_PB_HySA_10497:HG2_PB_HySA_13162:HG4_Ill_MetaSV_4598:HG3_Ill_MetaSV_4591:HG4_PB_SVrefine2PBcRDovetail_3512:HG4_PB_SVrefine2Falcon1Dovetail_4287:HG4_Ill_svaba_9305:HG4_Ill_scalpel_6910:HG4_Ill_manta_1787:HG4_Ill_SVrefine2DISCOVARDovetail_5266:HG4_Ill_GATKHCSBGrefine_5029:HG4_Ill_Cortex_3215:HG4_Ill_250bpfermikitraw_10008:HG4_Ill_150bpfermikitraw_9600:HG4_CG_vcfBeta_4704:HG4_10X_allpass_1417:HG3_PB_SVrefine2PBcRDovetail_3282:HG3_PB_SVrefine2Falcon1Dovetail_4295:HG3_PB_HySA_10898:HG3_Ill_svaba_9286:HG3_Ill_manta_1693:HG3_Ill_SVrefine2DISCOVARDovetail_5396:HG3_Ill_GATKHCSBGrefine_4906:HG3_Ill_Cortex_3235:HG3_Ill_250bpfermikitraw_9680:HG3_Ill_150bpfermikitraw_9437:HG3_CG_vcfBeta_4022:HG3_10X_allpass_1465:HG2_PB_pbsv_7108:HG2_PB_SVrefine2PBcRplusDovetail_9645:HG2_PB_SVrefine2PB10Xhap12_5193:HG2_PB_SVrefine2Falcon2Bionano_3576:HG2_PB_SVrefine2Falcon1plusDovetail_10363:HG2_Ill_svaba_9217:HG2_Ill_scalpel_7080:HG2_Ill_manta_2057:HG2_Ill_SpiralSDKrefine_14927:HG2_Ill_SVrefine2DISCOVARplusDovetail_11324:HG2_Ill_MetaSV_4412:HG2_Ill_GATKHCSBGrefine_4961:HG2_Ill_Cortex_7854:HG2_Ill_250bpfermikitraw_9997:HG2_Ill_150bpfermikitraw_9407:HG2_10X_allpass_1209:HG2_10X_SVrefine210Xhap12_5078:HG4_PB_pbsv_7107:HG3_PB_pbsv_6902;NumClusterSVs=54;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5078:HG2_10X_allpass_1209:HG2_Ill_150bpfermikitraw_9407:HG2_Ill_250bpfermikitraw_9997:HG2_Ill_Cortex_7854:HG2_Ill_GATKHCSBGrefine_4961:HG2_Ill_MetaSV_4412:HG2_Ill_SVrefine2DISCOVARplusDovetail_11324:HG2_Ill_SpiralSDKrefine_14927:HG2_Ill_manta_2057:HG2_Ill_scalpel_7080:HG2_Ill_svaba_9217:HG2_PB_SVrefine2Falcon1plusDovetail_10363:HG2_PB_SVrefine2Falcon2Bionano_3576:HG2_PB_SVrefine2PB10Xhap12_5193:HG2_PB_SVrefine2PBcRplusDovetail_9645:HG2_PB_pbsv_7108:HG3_10X_allpass_1465:HG3_CG_vcfBeta_4022:HG3_Ill_150bpfermikitraw_9437:HG3_Ill_250bpfermikitraw_9680:HG3_Ill_Cortex_3235:HG3_Ill_GATKHCSBGrefine_4906:HG3_Ill_SVrefine2DISCOVARDovetail_5396:HG3_Ill_manta_1693:HG3_Ill_svaba_9286:HG3_PB_HySA_10898:HG3_PB_SVrefine2Falcon1Dovetail_4295:HG3_PB_SVrefine2PBcRDovetail_3282:HG4_10X_allpass_1417:HG4_CG_vcfBeta_4704:HG4_Ill_150bpfermikitraw_9600:HG4_Ill_250bpfermikitraw_10008:HG4_Ill_Cortex_3215:HG4_Ill_GATKHCSBGrefine_5029:HG4_Ill_SVrefine2DISCOVARDovetail_5266:HG4_Ill_manta_1787:HG4_Ill_scalpel_6910:HG4_Ill_svaba_9305:HG4_PB_SVrefine2Falcon1Dovetail_4287:HG4_PB_SVrefine2PBcRDovetail_3512;NumExactMatchSVs=41;ClusterMaxShiftDist=0.116208;ClusterMaxSizeDiff=0.116208;ClusterMaxEditDist=0.116208;PBcalls=18;Illcalls=30;TenXcalls=4;CGcalls=2;PBexactcalls=10;Illexactcalls=25;TenXexactcalls=4;CGexactcalls=2;HG2count=22;HG3count=15;HG4count=17;NumTechs=4;NumTechsExact=4;SVLEN=-167;DistBack=95867;DistForward=2535;DistMin=2535;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=6:94657364-94657540;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:./.:0:3:0:2:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr6	95193322	HG4_Ill_SVrefine2DISCOVARDovetail_5271	TTAAGTTGAATATATAGATAAATTTGGGGGAACTGACATCTTAACAATATTTGATCTTCTGAAACATAAATAATCACGTCTCCCCATTTACTCAAGTCTTCTTAAGTTTCTCTCAATCATTTTTGTAGTTTTTAGTGTGAACATGTCTTTTACATCTTTGGTCAGATTTATCTCTAAGTATATCATATTTCTGATGGTACTATAAATATTATTCTATATTTCCCCTCCTGATTTTCCTTTGTTATAATACAGTAATACTATTTATTTTTATATACTGATTTTAATTTGTATATTTTGTCATATTGCCTACATAGACAGTCACATTCTCTTCAGAAAGGTGACAGTTTTACATCTTTCTTTCCAACCAGAGTGCTTTTTATGTCTTTCCCTTGCCTGATTTCAATGTCTAGAACATGCAGTTTAATGTCAAATTGAAGTCATAAGAGTAATATCCTTGAACTTTTTCTATGGGGAAAAACATTCAGTATTTTACCAAGTATGATGTTATTTGTGGGATTTCATAGATGCTCTTTATCCAGTGCAGTAAAACCCCTTCTAATCTGAATCTACTTGTGTTGCATTCTGTTAAATGGTTATTCTATATCTATTGAGATTATCATATTTATTTTCTTTTGGTTTTTAAAAAATATATTAAATTACACTCATTATTTTTTGAAAGTTAAGCTAGCCTTGAATTTCTAAACTGAACTATTTGGTCATGCTGTATTACACATTTAGATAGATAGATAGATAGAGATGATAGATGATAGATACAGACAGATGATAGATTAGATAGATAGATAGACAGATAGATAGATAACACTACATACATAAGGCATTTTTTAAATTTTATTTAGAGTTTTGGCATCAATTTCTATGTCTTCAAGTTCACTAATCTTTTTTTCTATAATATCTAATCAGTTGACAATCCTATCCAGTATATTTTTCCCCTTATACATTGTAGTTTTCATCTCTGAAAGTTTATTTTGGGTCTTCTTTATATTTCATATGCCTC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_7112:HG2_PB_assemblyticsfalcon_23416:HG2_PB_assemblyticsPBcR_22642:HG3_Ill_Krunchall_10032:HG2_Ill_Krunchall_10291:HG4_PB_assemblyticsfalcon_22797:HG3_PB_assemblyticsfalcon_23276:HG4_PB_SVrefine2PBcRDovetail_3514:HG4_PB_SVrefine2Falcon1Dovetail_4289:HG4_Ill_SVrefine2DISCOVARDovetail_5271:HG4_Ill_MetaSV_4599:HG4_Ill_GATKHCSBGrefine_5032:HG4_10X_allpass_1419:HG3_PB_pbsv_6907:HG3_PB_SVrefine2PBcRDovetail_3285:HG3_PB_SVrefine2Falcon1Dovetail_4298:HG3_Ill_SVrefine2DISCOVARDovetail_5402:HG3_Ill_MetaSV_4593:HG3_Ill_GATKHCSBGrefine_4910:HG3_10X_allpass_1467:HG2_PB_pbsv_7115:HG2_PB_SVrefine2PBcRplusDovetail_9648:HG2_PB_SVrefine2PB10Xhap12_5196:HG2_PB_SVrefine2Falcon2Bionano_3579:HG2_PB_SVrefine2Falcon1plusDovetail_10366:HG2_Ill_SpiralSDKrefine_14932:HG2_Ill_SVrefine2DISCOVARplusDovetail_11326:HG2_Ill_MetaSV_4414:HG2_Ill_GATKHCSBGrefine_4964:HG2_10X_allpass_1210:HG2_10X_SVrefine210Xhap12_5082:HG2_Ill_tnscope_846:HG2_Ill_breakscan11_1041;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5082:HG2_10X_allpass_1210:HG2_Ill_GATKHCSBGrefine_4964:HG2_Ill_MetaSV_4414:HG2_Ill_SVrefine2DISCOVARplusDovetail_11326:HG2_Ill_SpiralSDKrefine_14932:HG2_PB_SVrefine2Falcon1plusDovetail_10366:HG2_PB_SVrefine2Falcon2Bionano_3579:HG2_PB_SVrefine2PB10Xhap12_5196:HG2_PB_SVrefine2PBcRplusDovetail_9648:HG2_PB_pbsv_7115:HG3_10X_allpass_1467:HG3_Ill_GATKHCSBGrefine_4910:HG3_Ill_MetaSV_4593:HG3_Ill_SVrefine2DISCOVARDovetail_5402:HG3_PB_SVrefine2Falcon1Dovetail_4298:HG3_PB_SVrefine2PBcRDovetail_3285:HG3_PB_pbsv_6907:HG4_10X_allpass_1419:HG4_Ill_GATKHCSBGrefine_5032:HG4_Ill_MetaSV_4599:HG4_Ill_SVrefine2DISCOVARDovetail_5271:HG4_PB_SVrefine2Falcon1Dovetail_4289:HG4_PB_SVrefine2PBcRDovetail_3514;NumExactMatchSVs=24;ClusterMaxShiftDist=0.00295712;ClusterMaxSizeDiff=0.00295712;ClusterMaxEditDist=0.00789344;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1014;DistBack=108436;DistForward=73929;DistMin=73929;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:95193323-95194338;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:92:1/1:0:17:0:14:./.:0:0:0:0:1/1:0:25:1/1:2:61:1108:.:.
chr6	95335622	HG4_Ill_GATKHCSBGrefine_5033	ATATTATTATTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATAATAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5083:HG3_PB_HySA_10907:HG3_PB_pbsv_6908:HG4_PB_assemblyticsfalcon_22798:HG3_PB_assemblyticsfalcon_23277:HG2_PB_assemblyticsfalcon_23417:HG2_PB_assemblyticsPBcR_22643:HG4_PB_pbsv_7113:HG4_Ill_Krunchall_10619:HG3_Ill_Krunchall_10033:HG2_Ill_Krunchall_10292:HG2_PB_HySA_13171:HG4_Ill_MetaSV_4600:HG3_Ill_MetaSV_4594:HG2_Ill_MetaSV_4415:HG4_Ill_svaba_9311:HG4_Ill_manta_1789:HG4_Ill_GATKHCSBGrefine_5033:HG4_10X_allpass_1420:HG3_Ill_svaba_9295:HG3_Ill_manta_1695:HG3_Ill_GATKHCSBGrefine_4911:HG3_10X_allpass_1468:HG2_Ill_svaba_9224:HG2_Ill_manta_2060:HG2_Ill_SpiralSDKrefine_14933:HG2_Ill_SVrefine2DISCOVARplusDovetail_11328:HG2_Ill_GATKHCSBGrefine_4965:HG2_10X_allpass_1211:HG2_PB_pbsv_7116:HG2_Ill_tnscope_847:HG4_PB_SVrefine2PBcRDovetail_3515:HG4_PB_SVrefine2Falcon1Dovetail_4290:HG4_Ill_SVrefine2DISCOVARDovetail_5272:HG3_PB_SVrefine2PBcRDovetail_3286:HG3_PB_SVrefine2Falcon1Dovetail_4299:HG3_Ill_SVrefine2DISCOVARDovetail_5403:HG2_PB_SVrefine2PBcRplusDovetail_9649:HG2_PB_SVrefine2PB10Xhap12_5197:HG2_PB_SVrefine2Falcon2Bionano_3580:HG2_PB_SVrefine2Falcon1plusDovetail_10367:HG2_Ill_SVrefine2DISCOVARplusDovetail_11327;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_1211:HG2_Ill_GATKHCSBGrefine_4965:HG2_Ill_SVrefine2DISCOVARplusDovetail_11328:HG2_Ill_SpiralSDKrefine_14933:HG2_Ill_manta_2060:HG2_Ill_svaba_9224:HG3_10X_allpass_1468:HG3_Ill_GATKHCSBGrefine_4911:HG3_Ill_manta_1695:HG3_Ill_svaba_9295:HG4_10X_allpass_1420:HG4_Ill_GATKHCSBGrefine_5033:HG4_Ill_manta_1789:HG4_Ill_svaba_9311;NumExactMatchSVs=14;ClusterMaxShiftDist=0.102819;ClusterMaxSizeDiff=0.102819;ClusterMaxEditDist=0.102819;PBcalls=17;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-305;DistBack=67355;DistForward=2399;DistMin=2399;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:95335617-95335935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3461.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:1:33:0:20:./.:0:0:0:0:1/1:0:32:./.:2:6:.:.:.
chr6	95400827	HG3_Ill_GATKHC_11877	TGTGCACCCACAAGGCCAACACCACATGTAAGCTGCCAAGGCTTGGAGCTTGTACCCTCTGAAGCAAGAGCCTGAGCTGTATGTTGGCCCCTTTGA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_7114:HG2_PB_HySA_13172:HG2_PB_pbsv_7117:HG4_PB_HySA_10506:HG3_PB_HySA_10909:HG4_PB_assemblyticsfalcon_22800:HG4_PB_SVrefine2PBcRDovetail_3516:HG4_PB_SVrefine2Falcon1Dovetail_4291:HG4_Ill_svaba_9313:HG4_Ill_scalpel_6914:HG4_Ill_manta_1790:HG4_Ill_SVrefine2DISCOVARDovetail_5273:HG4_Ill_Krunchall_10621:HG4_Ill_GATKHC_11960:HG4_Ill_GATKHCSBGrefine_5034:HG4_Ill_250bpfermikitraw_10016:HG4_Ill_150bpfermikitraw_9608:HG4_CG_vcfBeta_4708:HG4_10X_allpass_1421:HG3_PB_assemblyticsfalcon_23278:HG3_PB_SVrefine2PBcRDovetail_3287:HG3_PB_SVrefine2Falcon1Dovetail_4300:HG3_Ill_svaba_9297:HG3_Ill_scalpel_7170:HG3_Ill_manta_1696:HG3_Ill_SVrefine2DISCOVARDovetail_5404:HG3_Ill_Krunchall_10035:HG3_Ill_GATKHC_11877:HG3_Ill_GATKHCSBGrefine_4912:HG3_Ill_250bpfermikitraw_9688:HG3_Ill_150bpfermikitraw_9443:HG3_CG_vcfBeta_4028:HG3_10X_allpass_1469:HG2_PB_assemblyticsfalcon_23419:HG2_PB_assemblyticsPBcR_22644:HG2_PB_SVrefine2PBcRplusDovetail_9650:HG2_PB_SVrefine2PB10Xhap12_5198:HG2_PB_SVrefine2Falcon2Bionano_3581:HG2_PB_SVrefine2Falcon1plusDovetail_10368:HG2_Ill_svaba_9226:HG2_Ill_scalpel_7086:HG2_Ill_manta_2061:HG2_Ill_SpiralSDKrefine_14934:HG2_Ill_SVrefine2DISCOVARplusDovetail_11329:HG2_Ill_Krunchall_10294:HG2_Ill_GATKHC_11926:HG2_Ill_GATKHCSBGrefine_4966:HG2_Ill_250bpfermikitraw_10005:HG2_Ill_150bpfermikitraw_9412:HG2_CG_vcfBeta_4222:HG2_10X_allpass_1212:HG2_10X_SVrefine210Xhap12_5084:HG3_PB_pbsv_6909:HG2_Ill_breakscan11_1042;NumClusterSVs=54;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5084:HG2_10X_allpass_1212:HG2_CG_vcfBeta_4222:HG2_Ill_150bpfermikitraw_9412:HG2_Ill_250bpfermikitraw_10005:HG2_Ill_GATKHCSBGrefine_4966:HG2_Ill_GATKHC_11926:HG2_Ill_Krunchall_10294:HG2_Ill_SVrefine2DISCOVARplusDovetail_11329:HG2_Ill_SpiralSDKrefine_14934:HG2_Ill_manta_2061:HG2_Ill_scalpel_7086:HG2_Ill_svaba_9226:HG2_PB_SVrefine2Falcon1plusDovetail_10368:HG2_PB_SVrefine2Falcon2Bionano_3581:HG2_PB_SVrefine2PB10Xhap12_5198:HG2_PB_SVrefine2PBcRplusDovetail_9650:HG2_PB_assemblyticsPBcR_22644:HG2_PB_assemblyticsfalcon_23419:HG3_10X_allpass_1469:HG3_CG_vcfBeta_4028:HG3_Ill_150bpfermikitraw_9443:HG3_Ill_250bpfermikitraw_9688:HG3_Ill_GATKHCSBGrefine_4912:HG3_Ill_GATKHC_11877:HG3_Ill_Krunchall_10035:HG3_Ill_SVrefine2DISCOVARDovetail_5404:HG3_Ill_manta_1696:HG3_Ill_scalpel_7170:HG3_Ill_svaba_9297:HG3_PB_SVrefine2Falcon1Dovetail_4300:HG3_PB_SVrefine2PBcRDovetail_3287:HG3_PB_assemblyticsfalcon_23278:HG4_10X_allpass_1421:HG4_CG_vcfBeta_4708:HG4_Ill_150bpfermikitraw_9608:HG4_Ill_250bpfermikitraw_10016:HG4_Ill_GATKHCSBGrefine_5034:HG4_Ill_GATKHC_11960:HG4_Ill_Krunchall_10621:HG4_Ill_SVrefine2DISCOVARDovetail_5273:HG4_Ill_manta_1790:HG4_Ill_scalpel_6914:HG4_Ill_svaba_9313:HG4_PB_SVrefine2Falcon1Dovetail_4291:HG4_PB_SVrefine2PBcRDovetail_3516:HG4_PB_assemblyticsfalcon_22800;NumExactMatchSVs=47;ClusterMaxShiftDist=0.0208333;ClusterMaxSizeDiff=0.0208333;ClusterMaxEditDist=0.0520833;PBcalls=18;Illcalls=29;TenXcalls=4;CGcalls=3;PBexactcalls=12;Illexactcalls=28;TenXexactcalls=4;CGexactcalls=3;HG2count=22;HG3count=16;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-95;DistBack=27557;DistForward=20283;DistMin=20283;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:95400828-95400923;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3462.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:68:1/1:2:23:0:12:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr6	96852797	HG4_Ill_SVrefine2DISCOVARDovetail_5277	TTTGCTGCAGGTCCCTGAAACCAATACCAAATGAAATTTTTCTGTCTTGTTTTGTGTCCTTAAGAGCTTAACCTTGTAACCATGTAGGGATACTATCTCTTGATTTCTCCCATCCAGAGGACAGGAATTTTAGGACACATGTCACAATTAACCCTAAAAATTATCTTGAGCACTTAAGAGTCTTTGCAAGCTTGAAATTGGCTGCTCTTCTGGGAATAGCAATAGAAACTGCTCAATGCTGTCTAGCTCAGTAGCTAAGGCTTTGTCTTTTGACAATGGTAGGCTGGGTTAAAGTCCTAGCTTCCAGAATAATTCCTTTCTGGTTTGTTATG	T	20	PASS	ClusterIDs=HG2_PB_HySA_13183:HG2_PB_pbsv_7123:HG4_10X_allpass_1422:HG2_10X_allpass_1213:HG4_PB_pbsv_7121:HG3_PB_pbsv_6915:HG4_PB_SVrefine2PBcRDovetail_3522:HG4_PB_SVrefine2Falcon1Dovetail_4298:HG4_Ill_SVrefine2DISCOVARDovetail_5277:HG3_PB_SVrefine2PBcRDovetail_3291:HG3_PB_SVrefine2Falcon1Dovetail_4305:HG3_PB_HySA_10921:HG3_Ill_MetaSV_4595:HG2_PB_SVrefine2PBcRplusDovetail_9654:HG2_PB_SVrefine2PB10Xhap12_5204:HG2_PB_SVrefine2Falcon2Bionano_3587:HG2_PB_SVrefine2Falcon1plusDovetail_10374:HG2_Ill_SVrefine2DISCOVARplusDovetail_11334:HG2_10X_SVrefine210Xhap12_5090:HG4_Ill_MetaSV_4603;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5090:HG2_Ill_SVrefine2DISCOVARplusDovetail_11334:HG2_PB_SVrefine2Falcon1plusDovetail_10374:HG2_PB_SVrefine2Falcon2Bionano_3587:HG2_PB_SVrefine2PB10Xhap12_5204:HG2_PB_SVrefine2PBcRplusDovetail_9654:HG3_Ill_MetaSV_4595:HG3_PB_HySA_10921:HG3_PB_SVrefine2Falcon1Dovetail_4305:HG3_PB_SVrefine2PBcRDovetail_3291:HG4_Ill_SVrefine2DISCOVARDovetail_5277:HG4_PB_SVrefine2Falcon1Dovetail_4298:HG4_PB_SVrefine2PBcRDovetail_3522;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0304878;ClusterMaxSizeDiff=0.0304878;ClusterMaxEditDist=0.0336907;PBcalls=13;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=245;DistForward=-76;DistMin=-76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=257;REFWIDENED=6:96852798-96853385;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:1/1:3:25:0:18:./.:0:0:0:0:1/1:0:12:./.:1:2:.:.:.
chr6	100034502	HG2_PB_SVrefine2Falcon2Bionano_3596	TATAAATATAGTTCATGGAACCCCAAAAGAATTACAACAATAACACCACAGATTACTGATCGCAGATCACCATAACAGATAAATGGCACCAATAGATGTACTCAATGCAGAGTCACCACACACTTTCCATTGTAAACAGCACAATATCTGTGAAACACAATAAAATGAAGTGTGGCTGTAGAATGCTGCAGCCAGGAAGTAATTCCAGACTGTGTGCCTAGAGTGTGTATGACTTCTATATTATACTGATAGTGCCAAGAAGGAACAAAGCAGGTATGTGTCAACATTGAACATATTAAGGACCAGCAAATAGCACACTTCCACAGGCCTTCCTACTGTGCTGAGCTGCTAATAGGTTGTCAATAGATATTTATTGGTTAAGTTTTAAAATTTTTTTTCCTGTTGCGGAATGGTGGGCAGGACGCTGAGCTAAGTATCAGACCCAGATGCTAACAAGGGCTCCTCTATTCACCAACCATGTGGCTTTGGATAAGTAACTTATCTGACGCTCATTAAAAAAATTAGAATAATAATAACTGCTAGGCCTACTTCCTAATATTGGGACTATGTATGGAATTCTTCAGAAAATGTGATTTAAAAAAAACAACAACAAATGAAAAGCTTTACAGACCCAAAATCTAAGTTCAAAGAGGCCCACTAGACAGGGTACCACACTTCTGAAAAAAAGCAGCTCAACCTCTTAATTACAGACAGTAAACCAAATTCCACATCCCAGTAAAAGTCTGGCTAATAACTCAGGAATCTTTCATTTGGTCTTACTTCCCTGAACTTATTTTCCTGACTTTTTCATCTGACTCCA	ATTGC	20	PASS	ClusterIDs=HG3_PB_pbsv_6924:HG4_Ill_GATKHCSBGrefine_5047:HG3_Ill_GATKHCSBGrefine_4928:HG2_Ill_GATKHCSBGrefine_4982:HG4_Ill_Spiral_600:HG3_Ill_Spiral_7859:HG2_Ill_Spiral_519:HG4_PB_SVrefine2Falcon1Dovetail_4303:HG2_Ill_tnscope_848:HG2_Ill_SpiralSDKrefine_14953:HG4_PB_SVrefine2PBcRDovetail_3528:HG4_Ill_manta_1793:HG4_Ill_SVrefine2DISCOVARDovetail_5289:HG4_Ill_Cortex_3220:HG3_PB_assemblyticsfalcon_23316:HG3_PB_SVrefine2PBcRDovetail_3297:HG3_PB_SVrefine2Falcon1Dovetail_4313:HG3_Ill_manta_1698:HG3_Ill_SVrefine2DISCOVARDovetail_5426:HG3_Ill_Cortex_3242:HG2_PB_assemblyticsfalcon_23449:HG2_PB_SVrefine2PBcRplusDovetail_9661:HG2_PB_SVrefine2Falcon2Bionano_3596:HG2_PB_SVrefine2Falcon1plusDovetail_10381:HG2_Ill_manta_2064:HG2_Ill_SVrefine2DISCOVARplusDovetail_11342:HG2_Ill_Cortex_7870:HG2_10X_SVrefine210Xhap12_5102:HG4_10X_allpass_1423:HG3_10X_allpass_1471:HG2_10X_allpass_1214:HG2_PB_pbsv_7132:HG4_PB_pbsv_7130:HG4_PB_assemblyticsfalcon_22838:HG4_Ill_MetaSV_4606:HG3_Ill_MetaSV_4599:HG2_Ill_MetaSV_4418:HG2_PB_assemblyticsPBcR_22680:HG4_Ill_Krunchall_10649:HG3_Ill_Krunchall_10068:HG2_Ill_Krunchall_10318;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5102:HG2_Ill_Cortex_7870:HG2_Ill_SVrefine2DISCOVARplusDovetail_11342:HG2_Ill_manta_2064:HG2_PB_SVrefine2Falcon1plusDovetail_10381:HG2_PB_SVrefine2Falcon2Bionano_3596:HG2_PB_SVrefine2PBcRplusDovetail_9661:HG2_PB_assemblyticsfalcon_23449:HG3_Ill_Cortex_3242:HG3_Ill_SVrefine2DISCOVARDovetail_5426:HG3_Ill_manta_1698:HG3_PB_SVrefine2Falcon1Dovetail_4313:HG3_PB_SVrefine2PBcRDovetail_3297:HG3_PB_assemblyticsfalcon_23316:HG4_Ill_Cortex_3220:HG4_Ill_SVrefine2DISCOVARDovetail_5289:HG4_Ill_manta_1793:HG4_PB_SVrefine2PBcRDovetail_3528;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0810127;ClusterMaxSizeDiff=0.0810127;ClusterMaxEditDist=0.0810127;PBcalls=14;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-815;DistBack=-345;DistForward=-788;DistMin=-788;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:100034502-100035321;PctSeqSimilarity=0.9727;PctSizeSimilarity=0.9975;PctRecOverlap=0.9927;SizeDiff=2;StartDistance=-2;EndDistance=4;GTMatch=0;TruScore=98;MatchId=3464.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:14:47:0|1:13:0:0:36:./.:0:0:0:0:0/1:49:14:0/1:83:24:.:.:.
chr6	100260130	HG2_CG_vcfBeta_4239	CGGCTGACAACTCTGAAATCTTTAGGGCTGACCAGCAGGCTAGAGACTCAGGAAAGAGTGGATGTTGTAGCTCAAGTCCAAAAGCAGTCTGGAAGCAAAATTCCCACTTCCTTGGACAACCCTAACCTTTTTCTCTTAAAGGAGTTATTA	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_10319:HG4_Ill_GATKHCSBGrefine_5049:HG3_Ill_GATKHCSBGrefine_4930:HG2_Ill_GATKHCSBGrefine_4983:HG2_PB_HySA_13209:HG4_PB_SVrefine2PBcRDovetail_3529:HG4_PB_SVrefine2Falcon1Dovetail_4305:HG4_Ill_manta_1794:HG4_Ill_SVrefine2DISCOVARDovetail_5294:HG4_CG_vcfBeta_4727:HG3_PB_assemblyticsfalcon_23318:HG3_PB_SVrefine2Falcon1Dovetail_4314:HG3_Ill_manta_1699:HG3_Ill_SVrefine2DISCOVARDovetail_5429:HG3_CG_vcfBeta_4048:HG2_PB_assemblyticsfalcon_23451:HG2_PB_SVrefine2PBcRplusDovetail_9662:HG2_PB_SVrefine2PB10Xhap12_5212:HG2_PB_SVrefine2Falcon2Bionano_3597:HG2_PB_SVrefine2Falcon1plusDovetail_10382:HG2_PB_PB10Xdip_26224:HG2_Ill_manta_2065:HG2_Ill_SVrefine2DISCOVARplusDovetail_11343:HG2_CG_vcfBeta_4239:HG2_10X_SVrefine210Xhap12_5103:HG2_Ill_SpiralSDKrefine_14954:HG3_PB_HySA_10943:HG2_Ill_breakscan11_1043:HG4_Ill_Spiral_602:HG4_Ill_MetaSV_4607:HG3_Ill_Spiral_7862:HG3_Ill_MetaSV_4600:HG2_Ill_Spiral_520:HG2_Ill_MetaSV_4419:HG4_Ill_svaba_9340:HG4_Ill_scalpel_6938:HG4_10X_allpass_1425:HG3_Ill_svaba_9323:HG3_10X_allpass_1472:HG2_PB_pbsv_7133:HG2_Ill_svaba_9248:HG2_Ill_scalpel_7109:HG2_10X_allpass_1215:HG4_PB_pbsv_7132:HG3_PB_pbsv_6925:HG4_PB_assemblyticsfalcon_22841:HG2_PB_assemblyticsPBcR_22683;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5103:HG2_CG_vcfBeta_4239:HG2_Ill_SVrefine2DISCOVARplusDovetail_11343:HG2_Ill_manta_2065:HG2_PB_PB10Xdip_26224:HG2_PB_SVrefine2Falcon1plusDovetail_10382:HG2_PB_SVrefine2Falcon2Bionano_3597:HG2_PB_SVrefine2PB10Xhap12_5212:HG2_PB_SVrefine2PBcRplusDovetail_9662:HG2_PB_assemblyticsfalcon_23451:HG3_CG_vcfBeta_4048:HG3_Ill_SVrefine2DISCOVARDovetail_5429:HG3_Ill_manta_1699:HG3_PB_SVrefine2Falcon1Dovetail_4314:HG3_PB_assemblyticsfalcon_23318:HG4_CG_vcfBeta_4727:HG4_Ill_SVrefine2DISCOVARDovetail_5294:HG4_Ill_manta_1794:HG4_PB_SVrefine2Falcon1Dovetail_4305:HG4_PB_SVrefine2PBcRDovetail_3529;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0474576;ClusterMaxSizeDiff=0.0474576;ClusterMaxEditDist=0.0542373;PBcalls=17;Illcalls=23;TenXcalls=4;CGcalls=3;PBexactcalls=10;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=3;HG2count=22;HG3count=12;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-149;DistBack=12457;DistForward=-148;DistMin=-148;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:100260130-100260279;PctSeqSimilarity=0.9967;PctSizeSimilarity=0.9933;PctRecOverlap=0.9933;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:3:12:0:34:./.:0:0:0:0:1/1:0:43:./.:.:.:.:.:.
chr6	100297524	HG4_Ill_svaba_9341	TTTCTTTGTGTCCTTTTGAAGACAGCCTGCCCTTTGTGTCTGGTTCCACGA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_7134:HG2_PB_HySA_13211:HG4_PB_assemblyticsfalcon_22842:HG4_Ill_svaba_9341:HG4_Ill_scalpel_6939:HG4_Ill_Krunchall_10652:HG4_Ill_GATKHC_11994:HG4_Ill_GATKHCSBGrefine_5050:HG4_Ill_Cortex_3221:HG4_Ill_250bpfermikitraw_10046:HG4_Ill_150bpfermikitraw_9642:HG4_CG_vcfBeta_4728:HG3_PB_assemblyticsfalcon_23320:HG3_Ill_svaba_9324:HG3_Ill_Krunchall_10070:HG3_Ill_GATKHC_11918:HG3_Ill_GATKHCSBGrefine_4931:HG3_Ill_Cortex_3243:HG3_Ill_250bpfermikitraw_9720:HG3_Ill_150bpfermikitraw_9480:HG3_CG_vcfBeta_4050:HG2_PB_assemblyticsfalcon_23452:HG2_PB_assemblyticsPBcR_22684:HG2_Ill_svaba_9249:HG2_Ill_scalpel_7110:HG2_Ill_SpiralSDKrefine_14955:HG2_Ill_GATKHC_11953:HG2_Ill_GATKHCSBGrefine_4984:HG2_Ill_Cortex_7871:HG2_Ill_250bpfermikitraw_10032:HG2_Ill_150bpfermikitraw_9441:HG2_CG_vcfBeta_4240:HG2_Ill_breakscan11_1044:HG2_Ill_Krunchall_10320:HG4_PB_pbsv_7135:HG3_PB_pbsv_6927;NumClusterSVs=36;ExactMatchIDs=HG2_CG_vcfBeta_4240:HG2_Ill_150bpfermikitraw_9441:HG2_Ill_250bpfermikitraw_10032:HG2_Ill_Cortex_7871:HG2_Ill_GATKHCSBGrefine_4984:HG2_Ill_GATKHC_11953:HG2_Ill_SpiralSDKrefine_14955:HG2_Ill_scalpel_7110:HG2_Ill_svaba_9249:HG2_PB_assemblyticsPBcR_22684:HG2_PB_assemblyticsfalcon_23452:HG3_CG_vcfBeta_4050:HG3_Ill_150bpfermikitraw_9480:HG3_Ill_250bpfermikitraw_9720:HG3_Ill_Cortex_3243:HG3_Ill_GATKHCSBGrefine_4931:HG3_Ill_GATKHC_11918:HG3_Ill_Krunchall_10070:HG3_Ill_svaba_9324:HG3_PB_assemblyticsfalcon_23320:HG4_CG_vcfBeta_4728:HG4_Ill_150bpfermikitraw_9642:HG4_Ill_250bpfermikitraw_10046:HG4_Ill_Cortex_3221:HG4_Ill_GATKHCSBGrefine_5050:HG4_Ill_GATKHC_11994:HG4_Ill_Krunchall_10652:HG4_Ill_scalpel_6939:HG4_Ill_svaba_9341:HG4_PB_assemblyticsfalcon_22842;NumExactMatchSVs=30;ClusterMaxShiftDist=0.02;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.16;PBcalls=8;Illcalls=25;TenXcalls=0;CGcalls=3;PBexactcalls=4;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=3;HG2count=15;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=16422;DistForward=4428;DistMin=4428;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:100297523-100297575;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3466.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:54:./.:5:14:2:28:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr6	101494376	HG4_Ill_SVrefine2DISCOVARDovetail_5296	GAACTAATCTTTTTTATGGCTGCATAGTATTCCATGGTATATATGTGCCACATTTTCTTAATCCAGTCTATCATTGATGGGCATTTGGGTTGGTTTCAAGTCTTTGCTATTGTGAACAGTGCTGCAATAAACAAACGTATGCATGTGACTTTATACTACAATGATTTATAATCCTTTGGTATATACCCAGTAATGGGATTGCTAGGTCAAATGGTATTTCTGGTTCTAGATCTTTGAGGAATTGCCACACTGTCTTCCACAATGGTTGAACTAATTTACACTCCCACCAACAGTGTAAAAGCATTGCTATTTCTCCACATCCTCTCCCGCATCTGTTGTTTCCTGAATTTTTAATGAATGCCATTCTAACTGGCATGAGATGGTATCTCATTGTGGTTTTTATTTTCATTTCTCTAATGACCAATGATGATGAGCTTTTTTTCATATGTTTGTTGGCCTCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTCACCCACTTTTTGATGGTCTTGTTTGTTTTTTTCTTGTAAATTTGTTTAAGTTCTTTCTAGATTCAGGATATTAGCCCTTTGTCAGATGGATAGATTGCAAAAATTGTCTCCCATTCTGTAGGTTGCCTGTTCACTCTGATGATAGTTTCTTTTGCTGTGCAGAAACTCTTTAGTTTAATTAGATTCCGTTTGTCAATTTTGGCTTTTGTTGCCGTTGCTTTTGGTGTTTTAGTCATGAAGTTTTTGCCCATGCCTATGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTTATGTTTAAATCTTTAATCCATCTTGAGATAACTTTTGTATAAGGTGTAAGGAAGGGGCCCAGTTTCAGTTTTCTGCATATGGCCAGCCAGTTTTCCCAATGCCATTTATAAAATAGGGAATCCTTTCCCTATTGCTTGTTTTTGTTGGGTTTGTCAAAGACCAGATGGTTGTAGATGTGTGGTGTTATTTCTGAGGCCTCAGTTTTATTCCACTGGTCTATATATCTGTTTTGGTACCAGTACCATGCTGTTTCAGTTACTGTAGACTTGTAGTATAGTTTGAAGTCAGGTAGCATGATGCCTCCAGCCTCGTTCTTATTGCTTGGGATTGTCTTGGCTATATGAGCTCTTTTTTGGTTCCACATGAAATTTAAAGTAGTTTTTTCTTTTTTTATAGCATACATATGTACACATGTGTAAAGGCATGTCAATTACTCAATCTACACAAAATGCCAATATTTTTATAAATTCAAGAATCCTTTGTGATAAATTCAGGACCACCAGGAGCTCAAAAATTCCAAGTTTTTGTTTGTTTGTTATTTTAAATTGGTGGAGGTTTGTTTGTTTATTTTATTTTTAAATTTCTTCCTTCTTTTTTGAATTATACTTTATGTTCTGGGATACATCTGCAGAATGTGCAGGTTTGTTACATAGGGATACATATGCCACGGTTGTTTGCTGCACCCATCAACCCATCATCTACATTAGGTATTTCTCCTAATGCTATTCCTTCCCTAGCCCTCCACACCCCCGAGAAGCCCCAGTGTGTGATGTTCCTCTCCCTGTGTTCATGTGTTCTCATTGTTCATCTCCTACTTATGAGTGAGAACATGCAGTGTTTGGTTTTCTGTTCCCGTGTTAGTTTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCTGCGAAGGATATGAACTCATGCTTTTTTTTTTTTTTTTGAAACAGAGTCTCGCTCTGTTGATCTCTGCTCTCTGCAAGCTCTGCCTCCTGGGTTCATGCCATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACTATGCTCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCTGCCCACCTTGGACTCCCAAAGCTGTGGGATTACAGGCATGAACCATCACACCTGGCCCA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11348:HG4_PB_pbsv_7141:HG2_PB_HySA_13221:HG2_PB_pbsv_7138:HG4_PB_SVrefine2PBcRDovetail_3530:HG4_Ill_SVrefine2DISCOVARDovetail_5296:HG3_PB_SVrefine2Falcon1Dovetail_4317:HG2_PB_SVrefine2PBcRplusDovetail_9663:HG2_PB_SVrefine2PB10Xhap12_5213:HG2_PB_SVrefine2Falcon1plusDovetail_10383;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11348:HG4_PB_SVrefine2PBcRDovetail_3530:HG4_Ill_SVrefine2DISCOVARDovetail_5296:HG3_PB_SVrefine2Falcon1Dovetail_4317:HG2_PB_SVrefine2PBcRplusDovetail_9663:HG2_PB_SVrefine2PB10Xhap12_5213:HG2_PB_SVrefine2Falcon1plusDovetail_10383;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00149142;ClusterMaxSizeDiff=0.00149142;ClusterMaxEditDist=0.0144279;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-2009;DistBack=33353;DistForward=-1683;DistMin=-1683;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1183;REFWIDENED=6:101494377-101497568;PctSeqSimilarity=0.9403;PctSizeSimilarity=0.999;PctRecOverlap=0.8877;SizeDiff=-2;StartDistance=-224;EndDistance=-226;GTMatch=0;TruScore=94;MatchId=3468.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:37:./.:11:1:0:3:./.:0:0:0:0:0/0:71:0:0/1:212:59:2028:.:.
chr6	102209808	HG2_Ill_250bpfermikitraw_10050	TTTTCCTTCCTTTCCTTCCTTCCCTTCCTTTCCTTTCCCCTCCCTTCCTTTCCTTCCTTCCTCCCTTCTTTTCTTTTCTTCCTTTCTTTCCTTTGTTTGTTTCTTTTCCTTCC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4320:HG4_Ill_GATKHC_12015:HG4_Ill_GATKHCSBGrefine_5055:HG2_Ill_GATKHC_11972:HG2_Ill_GATKHCSBGrefine_4987:HG2_Ill_250bpfermikitraw_10050:HG2_PB_pbsv_7141:HG3_PB_pbsv_6931:HG4_PB_pbsv_7144;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10050:HG2_Ill_GATKHCSBGrefine_4987:HG2_Ill_GATKHC_11972:HG4_Ill_GATKHCSBGrefine_5055:HG4_Ill_GATKHC_12015;NumExactMatchSVs=5;ClusterMaxShiftDist=0.102326;ClusterMaxSizeDiff=0.102326;ClusterMaxEditDist=0.102326;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-112;DistBack=-6;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=247;REFWIDENED=6:102209645-102210003;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:0|1:33:1:3:26:./.:0:0:0:0:0/1:20:14:./.:.:.:.:.:.
chr6	102815123	HG4_Ill_Cortex_3225	CAGTGTCCTGAGAGCACAGTGTGGAAATATATTAATTCTGTCCAATGGTACCGAATGTTTTATAGAGTAGAGTAGGTAATAGTGGAGTGGGCTATTTAAGAGAAACTTGGAATTTATCAGGTTAAAAAAATGAATTTGTTCCATCATACTCTGCACGTGTGCGAGAGAATACATGACCTGCTCAGAGCCAGGTTTAATCTAGAGGAAGATAAGTTTGCTAAGGTCACATGCAAGATCATTAAACTACCATTTGAAAGAACAATTCATTATCTGTTCTTGTTGTTGTTTATAACTTTAGTCCATAATGTTTGTGCAAATTATTTTTTAAAAAACTGTTTATTTGGAGAATGAAAAATAAAATTGGGACAGTAGTATTTACTTTAAAGAAAAGTAAATAAGTGGAGATTTTTTTCCAGGGAAATATAGACCATGGAATCTTTCATAAGCATGTAGGAATTTTATTTCCCTAAAGAGATAGTTATAACAAGCAAAATTTCCTTAGGACATCATGGTATCTACGTACTTAAGCACTGATAAAAATTCTCATGTGAAAAAGGAAAAAAAAAACAGTAACCATTTGAATATGAGTGAATGTTCCTCTAAAATATGTAAAAATATGAAAAAATATTGTTAATAACATAAAACAAAACATTTAATTGAAATTAAACACATATGCAGATACACGGTAAGC	TTA	20	PASS	ClusterIDs=HG2_Ill_Krunchall_10351:HG4_Ill_GATKHCSBGrefine_5058:HG2_PB_SVrefine2PB10Xhap12_5216:HG4_PB_SVrefine2Falcon1Dovetail_4314:HG4_Ill_manta_1796:HG4_Ill_SVrefine2DISCOVARDovetail_5299:HG4_Ill_Cortex_3225:HG3_Ill_Cortex_3247:HG2_PB_SVrefine2PBcRplusDovetail_9665:HG2_Ill_manta_2068:HG2_Ill_SVrefine2DISCOVARplusDovetail_11352:HG2_Ill_Cortex_7883:HG2_10X_SVrefine210Xhap12_5111:HG2_Ill_tnscope_849:HG2_Ill_SpiralSDKrefine_14977:HG4_10X_allpass_1427:HG2_Ill_MetaSV_4420:HG2_PB_pbsv_7146:HG3_PB_SVrefine2Falcon1Dovetail_4323:HG4_PB_assemblyticsfalcon_22866:HG2_PB_assemblyticsPBcR_22709:HG2_Ill_Krunchall_10352:HG4_Ill_MetaSV_4608:HG3_PB_assemblyticsfalcon_23343:HG4_PB_pbsv_7149:HG4_Ill_Krunchall_10681;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5111:HG2_Ill_Cortex_7883:HG2_Ill_SVrefine2DISCOVARplusDovetail_11352:HG2_Ill_manta_2068:HG2_PB_SVrefine2PBcRplusDovetail_9665:HG3_Ill_Cortex_3247:HG4_Ill_Cortex_3225:HG4_Ill_SVrefine2DISCOVARDovetail_5299:HG4_Ill_manta_1796:HG4_PB_SVrefine2Falcon1Dovetail_4314;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0661278;ClusterMaxSizeDiff=0.0661278;ClusterMaxEditDist=0.0969875;PBcalls=9;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=3;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-688;DistBack=-31;DistForward=-225;DistMin=-225;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:102815123-102815813;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9985;PctRecOverlap=0.9986;SizeDiff=-1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:39:0|1:50:0:1:35:./.:0:0:0:0:0/1:59:13:0/1:62:16:.:.:.
chr6	103737465	HG2_PB_SVrefine2Falcon2Bionano_3602	TGAATTCTGAGTGCAGAGAGGAAAACTGAGAAAAATCCACAAGCACTCTGGGTCATACACTGAGAATCAGGCAGGAAGTGTCTGCTATTGGGGAAGACATATGAGAGTTGAAAGAGAGCTCTTGATAGACTCACGTGCATTGTTAGCAGAGGACATTACTAAGGAAAACCCCACAGGCACTTATATTGCAACAAGTTCCTGGTAGTAAACCCTTCTACCACTGGAAAAGTAGAGGAGACCCAAGAGACATCCTCATGGTCTAGTGATGCCTGATGCATGGTAGAGAGAAATGAGTCAAAACCTCTAGACCCTCAGATCTTAATCACTGCTAAAGAAAATGTGTAACCTTGCCATCATATAATTTGAAACCTGTGGTGAATTGAATGTAGATAAAGCACAATACCAATAACCAATCCACCACAGACTTGTTTGACTCAACTGCCCACACTGAAGGCTTGGGAGAAAAAGAAGCATGTCCTTTTCCACACTTAAATATTATTTACACTAGATTTTGAACATCATGGTTAACATTCATCAAAAATTACCAGATATGTGAAAAACACAAGGAAGTAAAACGTATTGTCAAGAAGGGAAATAGTCAATAAAACCAGATGAAAAGATTGCCCAGATGTTGTCAGAAAGGGATTATAAAATAAATGTGATAAATACAGTATCTATATTGTCTTTAGTTACAGTAAACATGTTAAAGGATCTATTGGAAAAGGTGAACAACACGTGAACAAGTGAGGAAGAGCAGCGAATATATAGGACAAAATGTGAATTCTAGAAAATATATAGAGGCAAAAAATTATTCCGTGGACTTAACAAAAGACTATACACAGCATGGTAATACTCATTGATCTTGAAACCAGACCAACGTAACATAAAACCAGAAATAAAAATGGTTAAGTGTAGAAAAGAATATAAAACAGCATTCTGTGATCAGTGAGATAATGTAAAATGCTTTTCCAAATGCGAAATGGGAGTTTAACAAGTTAAAAAAAAGTCACAAGAAAGACAAAAAGTTAGAAAAGACAAAAGAAAAGAAAAAAGTGCAAAGAAAAGTACGTAAAGAGAATGACTAAGATTTTCCAATATCAATGAAAAACATAAACCCATAAATCCATGAAGCTCAAGATATTTCAAAAAGAGTAAACACAAAAAAAACTCACTTTGTAATATTAAAATGAAAGGCTGCAAAACAAAAAAAGTCAAAAAAGAAGTCACATAACATGTAAGTTATAATAATATAATATATGGTTGATTTCTTATAAGAAACAATGAAGACCAGAAAGCAATCAAATGAAATATGTAACATATGAAAATAAGGAAGTTACAAATTCAAAATTATATGTTCAGTAAAAAAAAAACCTTCAAAAATGAAAGAAAAATAAAGATGATTTTAGAAAGATAGTGTGTTTATTTCCAGAAGTTACGCAGTATCAAAAAAAGTTGTTTGCAAGAATATTGATGCCAGATAAAAGACTGTTTCCACAGGAAGGATTAGAAAACTTCAGAAAGAGTGTGTTTTAAATATAAAACTCTTTTCTAAGAATTTATAATAAAAACCATTTAAAGACCTTTAATTGTTTACATTTAAAATAATAAAAATGAAATATGGGTTTGTATTATATATAGAAGTAGAATATATGACAAGGGTGAGATTGTTGAAAATGGAATTGGAAATGTACTGTTACAAAGTTTATATTGTTACAATGACATTATTCATAGAGCTCTATACGCACACAAACAGACACACACACACACACACACGCACAAAGAATGTAAGTCCATAAGGCTTACAGCAGGTTTTAGGGCAGGCTAGAAAGATAGCAAAAAATAAAAACATTTTAAAAAAAGCATTGAAAGTAAATAGAGTAGAAATAATAAAATACTTTTAAAACAGCAATTTCACAAAAAAGGCAGGAAAAGATCAAATAAAACAATGGAAAGAATAAAAAATAATAATCTTAAAGCCTAATATATCAATAATTGCATTAAACATAAATTAAATATAAAACAGTTAAGTATCTAAATAAAAGCTTGCCAGATTTGATTGAAAGAATAGACTCCATGAATGCCTATGTTCATTGCAGCACTATTCATGATAGCAAAGACATGGAATCAACCTAAATGCCCGTTAGTGATAGACTGGATAAATAAAATGTGGTACTTATACACCATGCAATACTGTGCGGCCATAAAAAAAAGAATGAGATTGTGTTCTTTTCAGGGACGTCAATGGAACTGGAAGTCATTATCCTTAGCAATCTAACGCAGGAACAGAAAACCAAATATCGCATGTTCTCACTTATAAGTGGGAGCTAAGTGATGAGAACTCATGGATACATAGAGGGGAAAAACACATACTGGGGCCTATAGGAGGTCAGAAGGTGGGAGGAGGTGGAGGATCGGGAAAAATAACTAATGGATACTAGGCTTACTACCTGGGTGTTGAAATAATCTGTACAACAAACCCCCATAACACAAGTTTACCTATGTAACAAACCTGCACATTCCGCATATGTACCCCTGATCTTAAAATAAAAGTTAAAATAATAATAATAATAATAATAATAATAATAATAATAATAGAATAAAGACTCAGCTGCTTTTTTGTTGTTGTTAGGGTCTCTTTTTACTACTCAGGCTGGAGTGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCACCTCCCGAGTTCAAGCAATTCTCCCACCTCAGTCTCCCAAGTAACTGGAACTACAGGCCCATGCCACCACACCCAGCTAATTTTTGTACTTTTTGTAGAGATGGGGTTTCACCACGTTGTCCAGGCTAGTCAACTGCTTTTTAAATTAAAAAAAAAAAATCTAAGAACAAATGTTTGGATGTTTTTTCTGACCAAAATGAAGTAACAAAGACTAGATTTATATTCTTGCCACTGACAACATAAACAAGAAAATAGGCAAAAATATACAACGATGGATTTCGAGACACTGAATATCAGTCAACAAAGGATAGTGCTCCTCAAATAGAACAAACAAATGTAGTGACACTTACAATTGCCTCCAGCCACTGCCTTGAAATAGTTCCCAGGCACGTGGAAGAGGGACCCAGGGGAATCTGGCATTCTCTGAATTGATGAGATGGATTTGAGCTCAGAGAGATCACATCAGCTACTGTTTGTAGACCGAAATAGCAGAGAAGAGAAACCTGCACAGTAGCAGAATTATGGAGATCTACAGAAAATCCCCATCAACTGTTTACCAGGGTTGCAATTTCTTTATGAATGGCGGGAAACTACTGAACACTAGAGAAAAAGACTTAGCTAAATGAATTAGAGGTAAAAGTGCTTGGCATTCACAAACTGTAAAAACCTCGTAATTCATATGGCACTGGGTGGAATATTCACACAGGTCTTGCCTCAATTGTGGGAGATAATTAACCTTAGACTAAAAACGATTCTGGCTTCACTTAGCAATCTTAAAAGCAAAGCTCAAAAGAATTAAACTGTCTCCAAGTAATTTAACATCATCCTGGCATGGCAGAGGGGAGGCTCATGAATATTTATAGTAATATAAAAATATAGATCACTCAATAGGGTAAAATTCCTAATATATGGCTTCCAATGAAAAGAAGTAGGAGAATATAATAAAAAATGAGGACAGAAATCACTCACACTGATACAGAACTGAAACAGATGTTAGAATTAACAGAGGCATTAAAATAGTTATTAAACTGGATTCCAGATGTTCAAAAGTTAAGTAAAATCATGGAAATTATTTAAAATATTCAAATAAAACTTTAAGTGGAAATGAAATGTCTGAGATGAAAAATATAAGGTGGATATGATTAATGGTAAATTAGTCATTATACTAATAGAAAAAGATAAGTGAATTTGAAAACATATAGCCACAGAAACTATTCATAATAGAATGCATGAATAAATAGTAATTTAAAAAAATGGAACAACTTGAAGTGTAACCAAAGTCCTCAAAAGAAGGCAACAAACAATTTGCAGAAATAAATGTAAAATCTGATAAAAACTACAAATCTACAGATCCAATTGTGTCTGGAATTGGGTTCTTGGTCTCACTGACCTCATGAATGAAGCCGCGGACCCTCGCCATGAGTATTACAGCTCTTAAGGTGGCGCGTCTGGAGTTTGTTCCTTCTGATGTTCGGCTGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCGGTGAGTGTTACAGCTCATAAAAGCAGTGTGGACCCAAAGAGTGAGCAGTAGCAAGATTTACTGCAAACAGCAGAAGAACAAAGCTACCACAGTGTGGAAGGGGACCCCAGCGAATTGCCACGGCTGGCTCGGGCAGCCTGCTTTTATTCTCTTATCTGGCCCCCCCCCCCCTACATCCTGCTGATTGGTAGAGCCCAGTGGTCTGTTTTGACAGGGCGCTGATTGGTGCGTTTACAATCCCTGAGCTAGACACAAAGGTTCTCCACGTCCCCACCAGATTAGCTAGATACAGAGTGTCCACACAAAGGTTCTCCAAGGCCCCACCAGAGTAGCTAGATACAGAGTGTCAATTGGTGCATTCACAAACCCTGAGCTAGACACAGGGTGCTGATTGGTGTGTTTACAAATCTTGAGCTAGAGACAGAGTGCCGATTGGTGTATTTACAATCCCTGAGCTAGACATAAAGGTTCTCCACGTCCCCACCAGACTCGGGAGCCCAGCTGGCTTCACCCAGTGGATCCCGCACCGGGGCTGCAGGTGGAGCTGCCTGCCAGTCCCGCGCAGTGCGCCTGCACTCCTCAGCCCTTGGGCGGTCGATGGGACTGGGCACCGTGGAGCAGGGGGTGGCGCTCATCTGGGAGGCTCGGGCCGCATAGGAGCCCACGGAGTGGGTGGGAGGCTCAGGCATGGTGGGCTGCAGGTCCTGAGCCCTGCCCCGCGGGAAGACAGCTAAGGCCCGGCGAGAAATCGAGCGCAGCGCCGGTGGGCTGGCACTGCTGGGGGACCCAGTACACTCTCCGCAGCCGCTGGCCTGGGTGCTAAGCCCCTCATTGCCCGGGGCCGGCAGGGCCGGCCCGCTGCTCGAGTGCGGGGCCCGCCAAGCCCACGCCCACCCGGAACTCCAGCTGGCCCGCAAGCGCCCTGCGCAGCCCCGGTTCCCGCTCGCGCCTCTCTCTCCACACCTCCCTGCAAGCTGAGGGAGCCGGCTCTGGCCTTGGCCAGCCCAGAAAGGGGCTCCCACAGTGCAGTGGTGGGCTGAAGGGCTCCTGAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCCAGAGCGAACGAGGGCTGTGAGGACTGCCAGCACGCTGTCACCTCTCACAATTATCCGAAAAATAAAACAAACACAAGCACAGAACCGTGGCGAACACTACGCCAACCTATACCATATCAAATTACTCAAACAGTAGTAAAGAGATATCTTAAAGACAGCCAGAGGAAAACAGACACATTATGTGCAGAGGAACAAAAATAAGAGCATTAGCAAGCTTCTAGTTAGAAAGAATGTAAGCAAGATGACAGCAAACAAGAAGACATTTACCAACCACTGAAAGAACAACAACAATCAACCTAGAATTCTATATGTAGCACAAATGCCTCTTAGAAAATGAAAGTAAAATAAGGAATTTCAGATGTATACAAGAAGAAAAAAATAAATCACCAGTATATCCACAACACAAGAAGTGTGAAAATAAGTGCTTGCGGGTGAAGGAAAATAACATCAGATGAAAGTGTAAATCTATAGCAAAAAATATCAGATAAGGTATTTACATGGTAAATATAGCATAATTTTGTTATTTCAAGTTCTATTAAAGATATTTAAAATTTTGAGCAAAAAGCCCAATGCATTATGTGTTTATTTTTAAAGTATTATTGAAATATAAATCAAGAATACCATAAAGACCAGGTGGAAAAAAAATGGAAGTATATTATTACCAGTTTCAAACACTATATGTGAAGTGGGATAATATCAGATAGACAGTGACACATTAATGTATATAATAGGAAGCCTAAAGCAGCCATTAAAATAACTAAACAAAGAATTATAGAGGATAAACCAACAAAAGATATAAAATTAAATCATTAAAAAGTAGGCAGAAAAAAATTTAAAGCCAGAAAAAGAAAATGGGGAAAAATAAATGGAACAAATAGAAAACAATATTGTTTTTGTGATTAAAAAACACTAAGATCTACCCTTTCAGCAAAGTTGAAGTATATAAAAGAGTATTGTTAACTATAGACACTATGCCATATAGTAGATCTCTAGAACTTAGTGATCTTGCATAACTGAAATTTTGTACACTTTGACGATTACCAACCCATTTCTCCCTTCCGTATGTCCCTGGTAACTATCCTTCTACTTTCTACATCATTATTTTGACCTATTTCAGATTCTTTGTATAAATGGGATCATATAATATTACTGAATATGCATTCCTTCTTGGTCTGGCTTATTTCACTTATCATAATGTCCTCCAGATTTATCCATGTTGTCACAAAGGCAGAATTTCCTTTTTTAAAATGCTAAATAATAATCCACTGTGTGTATATACTGCATTTTCTTTATCCGTTAATCCTTAGAAAGACATTAAGTTTACTTCCATATCTTGGCTATTGTGAATAAACTTTGCAGTTCCTCATAATTCACAAAATAGCAGCATATCGATCTCCACATTTGAATTTAATTTCTTGGAAAAACAAAGAATAATTACAAAAAAATGAAAAGATGATAATGAACAAATTTACTAATTAAATAATATTTTGGGGGAATATGGTAGACAATATAAAGATCAAAATTTTCTCAGAGTCTGTAAAATGTGTGTGTGCACGTGAGAGAGAGAGAGAGAATGAGAGAGAGTTGAAGAAGCTTCAGGAGTGTCCTTGAGAAACTTCTGAATTTTAGTTTATGTCTTTAAAATATACATTTACCAAAAAAATGTGGTTCTTTCATAATGGAAATTTTTTGGAGTAGAGACTTGTTGGCACTTGACTCAATTTCTTCTTGTTTGAGATTCTTTAAACTATACAACAATAAATAAACTCCCATATGGTATCATAATTCCATTTTATTAATACCAATTTATTGATTTCCTACTATATCAGTTAAGGAGCCAGTCAAGAGTCAGAAACTATATAAGTTATTTTGGCAGGGATAATTTAATATAAAGAATTTTATTAGGCTCTTCTTGCATGACTATTAAGAAATACCTGAGACTGGATAAGTTATAAAGAAAGAGGTTTAATTGAGTCATCGTTCTACAGGCTCCACAGGAAGCATGACACTGTCATCTGCTCAGCTTCTGGTGAGGCCTTGGCTGTTTACAGTCATGACAGAAGGCAACGGTGGCACCAGTGTGTCACATGGCAAGAGCAGGAGGAAGAGTGGGCAGGGGAGGTGCCACATGATTTCAAACAACCAGACATCGCCGGAACTCACTCCTTTCGTGAAGACAGCATCAAGCCATGAGGGATCTGCCCCATGACCCAAACACCTCTCATCAGGCCGCATTTCCAACATTGAGGATTACATTTCAACATGAGATTTGGGGCGACAAATATCCAAACTATTTCAAGAATTATCAACTAAAAAGGCGAAAAGAGAACAGTAATGTATCAATCACAGAGGCAACTCCTGAGGGAAGCAGCTACCTAGGCTAGACATAGAAAAACAAAAGGCAGAGCGATCCCGCAGAGCTCAAACTCAAACCCCTGAGAAAGAAGTGTAGCTAGTTTCAGTACCAGAAAAATACAGACTGAAATCAATTGTTATTACTGGAACTAACTGCCTTTGCTGGTGTGGAGTAGCAATCTTGGCCTGATCATGACAAAAATAGTAGATTAGCAAATTATAAGTACACAAACGAGTATTGTTAACTATAGACTCTATGCTATATAGTGCATTTCCAGAACTTAGTCATCCTGCATAACTAAAATTTTGTACCCTTTGACCATTACCATCCCCTTTCTCCCTTCCATCTATTCCTGGTAACCATCGTTCCACTTTCTGCACCTATTAGTTTGACTATTTCAGATTTCTTGTATAGAGCGGATCATATAATATTTCTGAATATGTATTCCTACCGGGTCCGGCTTATTTCACTTATAATGTCCTCCAAGTTCATCCATGTTGTCACAAAGGCAGAATTTCCTTCCTAAATTACCTTATTGCTGCTATAACAAATTATTATAAATTTATTTGCTTAATACAACACAAATAAACTATATTGTACCTCTGGAAGTGAAAAATCTGAGATGAATCTTACAGTCTAAAATGAAGATGTTGTTTTTGCTGCATTTATCCTGGAAGCTCTATGGGAGAACCCATTTATTTTCCTTTTCCAGCTTCTGCGGGCCACCTGCATTTCATGGATTGTGCTCCTTCCTCCATCTTCAAAGCTCAACACTCCAACCTCTGCTTGCATTGCCTTATCTCCTTTCTCCCTTGTCTTCCACTGCCACATTTCCTTCTCTGACTCTGACCTTCCTGCCTCTCCCTTTTAAGGACACTTGTGATACTTCAGGATAATACACCCATCTCAAGATCTTTCATGTAGTGACACCTGCGAAGTCCCTTTCCACATGTAAGGCAGCATATTCACAGGCTTCAGGAATTAGGACATGGACATCCTTTAGGAAGGTAAGTATTATTCTGTCTATCACAAATACAAAGCGGACAAAAGGACTAGCCATAGAGAGGAATGGAAAGCCAAACAGGAAACATCTAAAAACAAGTAAGTATTTTCTTCCTCCTCTAGCCTTCCATTCTCACTCTAGGAAACCCTATTGGTAGAGTTGGAATCATTTGTCAAAGAATTTTTTTGATTGATTCCCAGTCATAAGCTCATTATTAAGCAGAGAATGGACACATGATGAGAAACAATAGCTTAATAAATAGCACTGTGATGTGAATGTTCACGTCCCCCCAAAGTTCATAGGTTGAAACTGAATACTCAATGTGATTGTATTAAGAGGCGGGACCTTTGGGAGGCGATTAGGTCATGAGGGTGGAGCACTCCTGAATGGGAATAGTGCTTTTACAAGGGGCTGAAGAAATCAGAGTTCTTACTTTCCACCCTGTAAGGACACAGAAAAAAGGCACTGTCCATAAGGAAGTAGGCTGTCACCAGGCAAGAATCTGCAGGCACCTTGATCTTGGAATTCTTAGCCTCCAAAATTGTGAAAAATAAACATTTGTTGTTTATAAGCCACCCACCCAGTTTATGGTATTTTGTTAAAGCAACCCAAACTAAGGCAGGTAATGTAACTTAGCATTACTAAGAACTAAGGATACACACACACACACACACACACACACACAGCCTTCAAAAGATATAAATTTTATCAGAGAAACTAGAAAAGTACAAAAACAATTGCAGTAACAGATACATTAGATAAATAATACAATAAGGCATATAAAAATGGGAGGAGGGAACAGATAAATTGATCCAAATCAATGGGAAGAAATTGTACTGTGGAAGAAGAAATAATGCCTTTTCTCTGGTCTTTGGTAGAAAATAGGAACATTTTAAAATTATTATTATTTTTAAAATTTTTGTTGTGTGTAATTTGAATATCTTTCCAAATTTTGTTATTTTGAGTTATATTACCAATAATAAATGTTTTCTTTTCAAAACAATTGGTAATATGCAATAAGCTTGATACTTAATGTAAATTTATGGGATAAAGTTGAATCTATAAAATTGGCATTAAATATTTTAAAGATAAAATTTAGAAAGTCAATTACTAAAGTTGATAATTCCCTGGAGATATAAGTATGAGAAAACAGATATTTTTATTATATCGAGCTGTGACATTACTCATATAAACAAGCATGACAAATATCAATAGCTGATGAAAATAACTAGGATTTTTCATGTTTAAAATCTTACATGTTTTTAACTTTCACGTGTACATTATTTTCATGTATTCATATAGCTTATGTGTGAGTAATATGGATGTTTTCAAAAGTCTACATTTTAATAATACATAGCAATTAAAATAAAGTAAAATTATATAAAATCAAATTTCTTTTTATGTCTACGTAATTCAAGGGTTAAAAACAATAATATTATTTGCTGTGAGTCTGTCTTTTAATATGCATGCTATCTGAATGATATATTCCTAAATGCTTATTGTATACATTTCAAACAAAATAAACAATATATGTGATAATAGTTTTTACTTTTATTTCCCTAAAGTTAAATACCTGCAACTCACATTCAAAATAATCACTTAAATATGAGATTTTAGTCATTTTTCTGATTGGTTGAGATATATATATATATGTGTGTGTATGTGTGTGTATGTGTATATATATATGTATATATATTTGTATTTGTCTTTGTATTTATTTATTTTTTTGAGGCAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGCTGTGATCTTGGTTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTTCCCAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCCATCTCCTGACCTGGTGTTCCGCCTGCCTCGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACCACACCTCGCCTGGTTGATTTATTTTTAAATTTTTAAAATATGAAATATATCACAGAAGCACAAACATGCACAAAACACAAGTGTATATCCCCATTATCCCCTAATGCCTCCCCATTTTAAGCTTCCTTCCACTGTGCTGAAGTTAACATTGAAATTTTTGTATATCAGTTTGAAACATGCCTAAAAATAGCTTTATTATGTAAGCTTGTATCTCAAAATCTGTTGTTTAGTTTGGCCTGTTTTTTAAAAATGTTTAACTTACATACAAGTTATCCTTAAGTGTCTTTACTCTTCTTAAGGCTGTGTTCGTTTCACTGAGCATTATGTATATGAGTTATCTTGGTTGTTGTATCTATAATCCATTCATTTTTTCTGATGTAATGCATTTCATTGTATGAATATGCCATAATTACTTATGTATTCTGTAGTTGTTAAACAGTTGCAATTTTTCTGGTTTAAGAAAAATGCTACAATAAATAATTTTTTATTTTTACAAATATCATGGTCCATACTTGCAATAATTTTTTTGCTGGGTTTATGTATGACATGGATGCCAATATTCAAATGTAATCAATAATGCCAAACTTATCCAAACTTGTCGTGTCAATTTCTACTCCCACAAATATTGATCAGAGTTTCAATTATTCCACCTTATCAATACTTTATATTATCAAATTTGTGTAGGTTTTTTTAAAAATGATGGGCATTTGAGTGGTTCTGTTGTTTTGCTTTACATTCTCCTTCTTACTAAAAAGTTTCCTACCAGCTCATATTTTTAATAATCACTGATATATCCTCTTTGGTTAACTGTCGGTTTAAGTCTACTACTAATTTGTCTTTGAGTTTTGTGACATTTTATAATTACTTTGTGGGAGTTGCTGATATTTTGCCACTCTGTAGGTTGCGTTTTTAGTTTCAATGTTTTTTTGTTTTTTTCATAAATAGAACATCTAGGATTTTTTGTACCGCTTATAAGCAAAATAACAAATATTTTCAGATTGGATTATTGCATTTTTTATACTATTTGAAATTATTTCTCAGCTCCAAGTTTATGTTGATAATCATCTATCTCATCTCCAAAGATATTTATTTACCTTTAAATCTGCAATCAACCTGGAAGTGCTACCGTTTTAATGGTGTGATTTAGGGGCTGTATCCAACTGCCCTTGTATTAATACTAAACGAATCTGCATCATTTATTAAGAAAAACTATTTATTGAAAAGATTGTCATTTACTCAAAAGACCTCGGTTCCATAAGACCAACCTTGTTATAAATCAAGAGGATCTATTCTGTGGTCTCTACTATATTTCATTGGTTTATTTATTGAGTCTTTCACAATTCCAAACTATCTTAATTACTGTGAATTGTAAGTCTTGATGTCATATAGAGGATAACCTCTCACCTTTGTCTTGCTCTAAATTATCTTTCAGGTCTTGGCTCTTTGCTTTTTTGTATAAATTTTTGAATGAATTTGTCAATTTCTCCTCAAAAAAACACTTTAATCTTTTATTGGATGTGAAATTGACCGTAGATTGTAGATAAATAAGAGCAAAACATTACTTTTACATTATTTTTACATTTTCCGAATATTCCAAACCATGAATATGTTATGTACTTCTATTCATTAGATATTTTCATTTATTTCAATAATGATTTATAGATGTCTACAAAATAGGTCTTGCACATCTTTGTTAAATTTATTTCTATCATTTGATATTTTGAAGTTAACTTTACATCTTTTAACATTTCATTTATAAATTTCTTATAGTTATCTAAAAATTTTGTATCATACATATACACACGTGCCTGATATTTTGTATATAGACCTAATTTCTTCCCTGCTGTACTAGAATAAGGATGAGAAGAAAAGACAGAAAACTGCCATTATTGACAATATGAGAGTGTAGACAGTAGAAAAGAGAAAAAAGTGACCTTTGAACTAAATTACTAGATTAGAGATGTTATTAGCTAACATCACTGGTTTGAGATCTTTAACAGCTACATTTCAACATTTAAGTATTAAAGATGATATTTCCATAAGGATTTTTGTTGATATTTATATCAAATAGACTTATTCAGAGAAGAAATGTTCTTATCTTAGTTTTCTACAAAACATTTAATGCTAATGAATGTTTAATTTTACCCAAATATTATTCTACTTTTAGTGAAATAGCTATGACTATTTTCTTCTTTGTTTGAAAAGATGAATTTCATTATTTTTAAAATAGTAAATATTTCCTATTTCTATTCTTTTGTTTTACAAATGAGATGTAATAATGTATATACCACAGTGTTTATCAGTAGCCTATTACAGAAAAAAAAAAAAGGAAAAGTAGAGCTGGCATAAAGTGAAAAGTATAGCACAAATACAGAAATTATACCTTGAAAATCTAAAATTTCATTACTCATTTATACGAAAATTTAATTTCTTATATTTTTAATTTATAAATCTTAATGTTTGTGAAGTGTACTGAACATTAGTTTCCTAAACTACAGATAATGGAGAAAAAATACATCTGCTCTGGGTTTTAGTATATGAAAATTTTCACAATATTATTTTAACAAACTGCTTTTATTGCAAAGAAAATTTTGTTGGATTTCATCTCTCTGGAAGAGAGCATGGGATATCTACTGTGTAGCCAAAATATTATATTACCATTAAAGAACAAGATAGATTTATACATAATAGGCTCATTAAAATATCCCAATTATTGGCATTATTTTGTTTTTACATATTTATTTCACAAACCAGGCATAAAATGAATGAGAATTTTGAAATAAAATAGAGTTCAGCCTCATAAAATATGACTGTGTCTGAGGGTTCTATCAAATCTCTCAAGGGAAAAATCAAATCTGATAAAAGTCAGTATCCAATAATTTAATGTTGCAGTCCAAACATTTTATTGGAACATGATATTGTTAGCCTGCAAGCTGTTTTGCTGACATTTGATTACATTTTTAAATGGCTGTGAAACTAAATATGACAGGATTTAGTTTCCAGTTTGTTTTCTACACCCAAGGTCATTTAAGCTTTGTGGTATACCAGAAAGAATGTTTATGTAATACTAGCATGTATTACTAAATAAAATCTTATAGTGTAGCTTATTATTTATCTTATTAAATGTCATGTCATTTATTTTGTTTAAATATCATATTACAACCTAAAATATACACTGGCTGTAGTTTGTGTTTTGGAGATTAATATATTCAAATATAAAAAAGCTATAGCTTGATATATAAAAACATTAAGGAAATACATATGCATATATATTGTCAGACAAATTGAGGTTATAAATATTTGTCTAAGTGGGACTTAATTAAACTGAAGAGCTTCTGCATAGCAAAAGAAATAACCAATAGAGTAAACAGACAACCTCCAGAATGGGAGAAGATATATGTGAACTGCATCCAACAAAGGCCTAATATCTAGAATCCATAGAGAACTTAAAAAATCAAGAAGCAAGAAAAAAATAACCCCATTAAAAATGGTTGAAAAACATGAACAGATATTTCTCTAAAAAAGACATACAAGCAGACAAGAAACATGAAAAAATGCCTAGTATCACTAGTCATCAGAGAAATGCAAATCAAAACCACAATAAGACACCATCTCAAGCCAATGAGAATGGCTGTTACTAAAATGTCAAAAAACAACAGATGCTGGTGAGGCTGCAGAGAAAAGAGAATGCTTATGTATTGTTGGTGAGAATGAAAAATTAGTCCTGCCACTGTGGAAAGCAGTTTGGAGATTCTCAAAGTACTGAAAACCGAGCTATCATTCAATCCAGGAATCCCATTATTTGGTATATACCCAAATGAAAATAAAGCATTCTGCCAAAAAGACACATGTTCTTGTATACTTATGGCAGGACAATTCACAGTAGCACAGGTATGGAATCAATCCAAGTGCCTATCAATGGTAGAGTGGATAAGAAAAATGTGGTATATATATACACTATGGAATACTATGCAGCCACAAAGAAGAATTAAATCATGTCCTTTTGCAGCAACTTGTATGCAGGTGGAGACCATAATCCCAAGCCAATTAACACAGAAACAAAACCAAATACCACATAGTCTCACTCATAAGTGGGAGCTAAATTTTGAGCACACATGGACATAAACATGGGAACAACAGATACTGGGGTCTAGTCAAGAGGGTAGGGAGGAGGTGTGGATTGAAAAACTACCCTTCAGGCTCTATGCTCAGTACCTGGGTGATAGGATCCACATACCAGACCCCAGCATCATACAATATTCCCATGTAAAAAAGCCTGCACATGTAGTCCCTATATCTAAAATAAAGTTTAAAATCAAGTAAATAAATATTTGCCTATGCATATATAGGTATAACTGTATATTCATATGAAATGGATCTACATCTTTTAATATTTAATTTAAAAAAATCGACAGCATAAAATTTTCCTAGAAGATATATGGTAATTATTAATTCAAAATGTATCCATATGTGTCTATTTCTATTAACCTTTTGATTTGCACTGAAATGACTATGTATTTTAGTAATATGAGGCAAACAGTAATATTTCCCAACAAAAAATATGATACAAAAAAAGCTAAATTAAAACTTCTAAAAAGAAAATGTGGGAATTCAAAAACATATATTAATGTTCTCAAATGTAAGAACATATGAATGTTCTTACTTTAATAGAACATTTATCCTGAACTTTATGATCATGAAATTATCCAGGTATGCTGGTATATTCAATTTTATTTTTAATTTCTCACATATACATTTGCTGTAAGAATTTATGTTGCTGTCATCATTAGCTTTCTTTCTTCTTTTTTTCTTTAGAGACAGCATATTTCTGTTGCTCAGCCTGGAGTGCAGTGGTGCAATCATGGCTTACTGTAACCTCAAACTCCTGGGCTCAAGTGATACTCCCACGTCAGCCTCCCAAGTGACAAACCACTTCAGGTGCAAGCCACCATGCCCAGCTAATTTTGTTTTGGTTTGGTTTTTGGTAGAGATAGAGTTCCCCAGAAACCCTATGTTCCCCAGCATAGTCTCGAACTCCTGACCTCAAATGATTCTCCCATCTTGGCCTCCCAAAGGGCTGAGATTACAAGCATAAGCCATGAGCCACCACACCCAGCTTATTATTTATATTCTATAACCATGTTGTAGTATGCTCAATTAAATTTTTTTTTTGGAAAATAAGGCATATATATCTGATTCTCCATGACTTTTAGGATAGATTATTATGTTTGTTTGTTTTAGTTTCCATAATATGCGATCAGGCATATCAACTGAAACACAGAGACACTAGAAAAACCTGTCAGTCACGCAAAGTTGGGTTTATGGAAACTACGGCAGCAAAGGAAAACAGCACCTTGACAGTTCTGTTTCCCAAATGATGTAAATTAAGAAAGCATATTTATTGAATTTTGTAATATGAGAATGACTGATTAAGGGAGGCTTTTCAAGTAGGAGTTTAGGATTGAGTAAATATAATTTATGAATGGTAAGATGAGGGTCTCAATGAGAATGTTGATGACTAAATTGTCATGATAGGAGACCTGCTTGATCAGATGAGCAAATTTTGGCCTGCATAAATTTGTTTGCAAGAATTTCCAGAAGTGAATAGTAAAATTATTTGTTGATTTGGTGTGTCTTCTTCCGTGCAAGAATATCCCAGAAGGCACAGTTAAATTATCTTGACCCAGGTGGTCTCATTCTCAGTTTCAACAGTTGAGTTAGGTTGAAGCAGGTGTTCACAGTTCTTATAATTTTGTTCAGTGACATAGGTTAAAAGAAAATCTCCGGATATATTTTCCCTACAGAGATAAACTGAATTTCTCTTAGGTGTGTATAACAATTGAAATATATGTTCATGATGTAACAAAGGAGTAGTAAGTGGAAAAGCTGTCAGAAGGGCGCCAAAAGGTCTGGAAACCATGGTTTAAGTACAAAATCTAACAAAAAATATTAGCAAATTCTTACATTCTTATTTCAGAACCTCTTTGTGTTGACTGTGCTCTCTATATAATCTTCAAACCAAGGTATTTTTAAGATTCACTGTCTTCTCGTAGGCATGCTGAGATGGAATAAAGTGGGTAATGCACATGCCTGCTGGTGAAGATCTCTCAGGTCTGTTATATCTTTAATCTTTACCCTTTCACATTATATAATTACTATTATAGTTTCACTGGGTTTCTCTATTAATCACGTTATATGTCTATTTGCCATATCCAGTTACTATTCTTCATTCTTTATATAATTTGACCTATTTGTGGATAAAACATTGGTGAATATAATATCCTTCATTAAACTGTTTTAATATTCATTTCCATGAGACAATCTTTTGGTTTTAAAACAAGTGGATAAATAAAATGTTACATATATACAACATGGAATACTACTCAGCCATAAAAAGGAATGAAATAATAGCATTAGCAGCAACCTGGATGAAATTTGAGGCCATTATTCTAAATGAAGTAACTCAGGAAAAAAAAAATACTGTAAGTTCTCACTTATATATAGGAGCTAAGCTATGAGGATGCAAATGCATAAGAATGATAGAATAGACTTTGGGGACTTGGAGGGCAGGGTGAGAGGGGGAAGGAAAGAAGACTATACACTGGGTACAGTGTACACTGCTTGTGTGACAGGTGCACCAAAATCTTAAAACTCACCACTAGAGAACTTTGTCCACATGTTGGAAGTAGCAATTTATTTCAGGTCAATGATTGTTTATCAGATATCAATTTTATCTACATCTCAACAGCATTTGAAAGCTAACTAGCATTTTTTATGAATAATTCTTCAATAAATATATTGGAAAAGTTTTTGGAGATATGCATCAATTTGAAAAAAATTGTGGATGAAACTCATATCCTAGAAATGTTAAAAAAAAGAAAAAGATATGTTACGAATGCGTAGAATATATGTAGATTCTAGTCTATTTTATCATTCACTACTATTGAATATACACAAGTCTATTACAAAACCTTAACAACTATCAAAACTTATGCACATGAATACTTACAGACTGTACATGGCACCATTCCCAGTCTAGAGAAATGTCAACAAGTGTAGAGATGCAATATTAAATTAAAACTGCATAAAATTAACTATATTACATACTGAACTACTTCAAAAATTTTGTAGCCACCTCCTATTGCAAGTGGATGCTGATTATCTCTATGTGAGCAGTCCATCTCTCCAGTACAGTAAAAAGTGATCTTTTATGGTTCTTACATATTTTTATCATGTTTAGTGCAATATGGTAATCCTTGAATAATGCTATAAGACCATAAAAATTGCCACTACCAATGCTGGAAATGCTCTCAAGAAAATGCAGAGACAAATCATGGTATTCCAAGAAAGTTGAACTGCTTGATGTGTAACATAGCTTTAGGTCTACAGCTGCAGTTATGCAAATTTTAAGATAAATGAATCCTGAGGAAGGACCACTGTGAACAAAGAAAAAGGAAATTCATGAAGCCAAAGCTGCATCCACACAAGAAGGCACAAAACCTTGCGCTTCTAGTGAAATATCTTTTTATCTTGTATTAAAAATGCAACTTTTATGTAGGTGCAGGATTGCTATAAGTAAAGCATACCTATAGATTCTAATATGATTTGAGAAAAAGCAAAAAGAAGGTGAAAGATCTAATGGTGGAAAATGTAATGGGTGTAAAAGATAGTTAATAATTTTAAAAATAGATTTGGATTAAAAATATTTCAAGATAGCAGAAGAATCAGCTTCTGCCAAGCAAGAGACAGCAGACAAGTTCCCAGATGTTGATAAGAAAATCATTGAGGAAATAGGGTGTCTGCTTGAAGAAATTTTTAATGTAGCTTAAAGTGCCCTATCTTGGAGTAAAAAATGTCACAAATGGCATTTATCAGTCTAGAAGAGAAGCAATCACCAGGCTTTAAAGAAGGAAAAGACAGGCTAACTCGACTGTTTATGCAAATGCAGATGGGTTTATGATCAGGACTTCCCTTATGTATAAGCTTCTAACCCCTAAGTCTTGAAGGGAAAAGATAAACACTAGATTAGAATCACTAATCCCACCAGTTAGAACTTGAGTTCCCTAAAGTTGCCAGTCTTTTGGTTGTACAACAAGAAGGCCTGGACAACGAAAACCTTTTTTTCTGAATTGGTTCTATCAGTGCCTTATCCCTGAAGTCAAGTAGTGCCTTGCCAGTAAGAGGCTGCCTTTTAAAATTATTTTAATATTGCCCAATGCTCCTAGACCCCCAGCACTCCGTGAGTTCAACATTAAAGGTGTTGATGCAATTTACTTGTCCTCAAACACAACATCTCCAATTCAGCCTCTAGATCAGGAGGAATGAGGACCTTTAAGGCTCATTACACACAGTACTCTTACAGAAAGTATTATCAACACTATAGAAGAGAACGTCAATAGAGAACAGTGTGAAAGTCTAGAAAAATTATACCATTGAAGGTGCTACGATTATTATAGAAAAAAGCTTTGAAACACATCAAGACCAAAACAATAAATAATTTCTATTGGAGAAAACCGTGTCCTGATGTTGTACATGGCATTGCAGGATTTGTGACAGAGCCAATCAAGTATATTATACAAGAGTCTGTGGAGTAGATGGATCAAGATGGTGGAATAGAAGGCTTCACCAATAGTTCTCCCTGCAAGGGCAACAATGTAACAAAAATCTATACACGATAAAGTACCTTCATAAGAACCAAGAATCAGGTGAGCACTCACAGTATGTATATGACTGAAAGAGGCATAGAAGAGGTAGAAAAAACAGTGTTGAATCCCTGATCCCACCTTTTACCCACTGGCAGTAGCTGCATGGTGCAGAGAGCATCTCTAGGTGCTGGGGCAGGGAGACTGCAGCAGTTGTGAGGCATTGAACTCAGTGCTGTCCTGTTATAACAGAAAGCAAAATCAACTCAAACTCAACTAATGCCTACCCACAGAGGGAGCATTTAAACCAGCCTTAGCCATGGGAGAATCACTAATCCCACCAGTCAGAACTTGAGTTTCCACAAGCCTCGCTACTGTGGGCTACGGTGCCCTGGGGCTCTAAATAAACTTGTAAGGCAGTCTAGGCCACAAGGACTGTAACCCCTAGATAAATCTTACTACTGAACTCAGCCCAGAGCCAGGAGACTGTGGGGACACACAATCTACTGAGACACCAACTGGGATGCCTAAGGGAGTGCAGGCATCACCCTCTGCTAACCCAAGGACGCACAGCTTGCAGCTCAACAAGAGATCCCTAATTCTACTTGAGAAGAGGAGAGGAAAGAGTAGGGAGAACTTTGTCTTGCATCCAGGATAAGAGCTCAATCACAGCAGGATAGGACACTTGTCAGAGCCACAAGACCCCTTTTCCAGGCCCTAGCTCCCTGGTCCAGAAGGGAACGTGCTTCCTTAAAGGGAAGGGCCCAGTGTTGAAAGCATTAGCCAACTGCTAAATGAAGAGCCCTTAAGCCCTGAATAACCAGCAGCAATACCCAGTTGAAGACTTTGGGTGAGACTCTGAGATTTGCTGGCTTCAGGTGAGACTCAGCACATTCCTGGCTGTAGTGGCTATGAGTTGAGACTCTTTCTTCCTGAGAAAAGCAAAGGAAAATGTAAAGGGGACTTTGGTTTGCACAGAGTACCAGCTCAGCCATACAGAATTAGAGTGTCAAGCAGGCTCTTGGGGGTGCCCTGATTCCAGGACTTGGTTCTTGGACACCATTTCTGAACCTGCCCTTGCTCAGAGGGGAGCCCACCGCACTGAAAGGTGAGTTCCAGGTCAGGGAGTATTCATCACAAGATGACTAAAGAGCCCTTGGGCCTTCAGGGAACATCAACAGTCATCTGTAAGTACTTCCCTAGGGCCGTAGTGGAAGTGGTCTCAGGGAGAGGCTCTTCTGCCTTTGGAAAGGGGAGGGAAGGGTGAAAAGGACTGCATATTGTGGCTTGAGTGTCAGTTCAGCTGCAATACAACAAAATGCCAAGTAGACTTCTAAGGTTTTGATGTTAGTCTCTGGCTCCTGTGGCACCTCTGGACCTGCTGGGGTCCTGGGGAAACTCACTGTCCTGAAGAGAAGTACAAAGGCCTGACTGGCTTTGCCACGTGATGACTGTAGAGCCCCAGAGCCTTGAGTGAACATAGGCAGTACCAAGGAGTGGTTACGGCAAGCTTTGGGCAAGATCCAGTGCTGTGCTGGCTTCAGGTCTGAACAAGTGCTATCATAGTAGTGGTGGCTACAGGGCCACTTGTGTCACTCCCCCTCCAGCTTCAGGTAGATCAGAACAGAGGGAGAGACATCATTTGTTTGGGAGAAAGAAAGGGAAGAGAACAAGAGTCTCTGCCTGGTAATCCAGAAGACTTTCTCAGATCTTGTCCAAGAACATTAAGGCAGTACCTCTATGGGTCTGCAAGAACCAAAGCAATCCTGCACTTGGGGTATCCCCTAAACCAGGTATAGCTTAAATCACAACACCCAAGTCCTTTTGAATATTTGGAAAACCTTCCAAGAAGGACGGGTACAAAAAAAGCTCAGACTGCAAAGACTACCATAAATACATAACTCTTCAAGGCCCAGACACAGATGAAAATCTGTAAGTATCAAGATAATCTAGGAAAACATGACCTCAAATAAGGACCTCAAATAAGGAATTCATGATCTAAATAAGGCACTTGAAGCCAGTCCTGAAGAAACAGAGATATATGACCTTTCAGACAGAGAATTCAGAGAATTCAAAACAGCTGTTTTGTGGAAACTCAAAAAAAAATTCAAGAGAACATAGAGAAGGAGTTTAGAATTCTATCAAATACATTTAACAAATAAATGAATATAATTAAAAAGAATCAAGCAGAAATTATGGAACTTAAAATGAAATTGGGATACTGTAAAATTGGGATACTGTAAAAGTATTTTACTAGCAGAATTGACTAAGCAGAAGAAAAAATAGTGAGCTGGAAGACAGGCTATTTGAAAATACACAGTCAGAGGAGAGAAAATAAAAAAAAAAAAAACCATAAAAAGCAGTGAGGCATGCCTACAGGATCGAGAAAATAGCCGCAAAGGGACAAATCTAGGAGTTATTGGCCCTAAAGAGAAGGCAGAGAAATAGACAGTGGTAGAAAGTTTATTCAAAGGGATAATAACAGAGAACATTCCAAGCCTAGAGAAAGACATCAATATCCAAGTACAAGAAGGTTATAGAACAATAAGCAAATTTAACTCAAAGAAGACTACCTCAAGGCATTTAATATTCAAACTCCCAAAGATCAATGACAAAGAAAGGATCCTAAAAACAAGAGAAAAGAAAAAAATAACATACAATGGAGCTTGAATACATCTGGCAGTAGACTTTCCAGTGGGTACCATACAGGCTAGAGGAGAATGGCATGACATGTTTAAAGCGCTGAAGAAAAAAATTACTTTGGAATAATGTATTTGGGAAAAATATGTTTCAATCATGAAGGGGAAATAAAGACTTTCCCAGACAAACAAAAGTTGAGGGATTTTATCAACACCAGATGAGTCCTACAAGAAATGCTAAAGGGAGTACTTTACACAGAAAGAAAAGAGTGTTAATGAGCAAAAAGTTATCACTTGAAGGTACAAAACTCACCGATAATAGTAAATACACACAAAAAAACACAGAATATTATAACACTGTACTGTAGTACGAAAACTACTCTTACCATAAGTAGAAAGGCTAAATAATGAATCAATCAAAAATAATATATACAACAACTTTCTAAGACATAGAGGGTACAATAAGCTATAAATATAAACAACAAGGAGTTAAAAATTTGGGAAGTAAACTTAAGAAGTAGAGTTTTTATTAGTTTTCTATTTGCTTGTTTGTTTATACACACAATGTTAAGTTGTTATCGGCTTAAAATAATGGGTTATAAGACAGTATTTGCAAGCCTATGGTAACCTCAAACCAAAAAACATACAATGGATACATAAAAAAAAAGCAAGAAACTATATCATATTTTTGGAGAAAATTATATATACTAAAATTATATATAACTTTTGAGGAGTTCAAAAGTTATATATGAATTTTCAACTATGTGAAGGGACATGCTCCTAACCTCTATGTTGTTCAAAGGCCAACTGTATGGTTAATTCCCCCAGATCATCCAGAATAGAAGTTATGCCCAAGTTCCAACAACTTTTGCTAAATGACTAGCACCAATAGTGATACATAGTAGATGCTTCAAAAATATGTTTATCTACCCTCCATTTCTTATTCCTTTGCCAATATCTAGCAAAATTAAAAGTATTTTAAAATGTTATAAGATTATAAAGAACATTATTTATTTGAAAAAACCAAATTAATTAAAGAATATTACAAATGCCTGAGCTGGAAAAAGACCAAAGGAATAACATAGGTTTGTTTGTTCGTTTGTATTTTTGAAAAAGTGAATACATTCTAGTTGGGGTAAAACCCTTACTTCAATTTGACAAAATAAAACCTGTGTACAGTATAAAAAAGTAGGATCTTTCTGATTGCATTCATATCTTTTCTGTGGTAGAATTTTATCCCAGAAATAGTGGGAAATCACAAAGACACTCCACTACCAATTATTTTCAACAGAATTACAGCAGTAATAAATAGAAGCTGGCAGAGAGGGTTTCTTTCCTCTTAATAGTGATTAGATAAGCAGATTATCTAAATAATTCCATTATAAATAAATCTGAATCATATCAAGATAAGAAAATTCAAAACAATAATATAAACTCTCTCTTCATATATTAGTGAGTTTTGTCCTTTCTTGCATAAATGTAAGACAAAGTCACAGTCGACTTGAAATGGTAATTTTCTTTTTCATCTCTCAATGTCATACGTTGTAAGCATTCCTAAATGACATTTAAACCTGACTCAGTCATCTAAACAATAAAACCTATTTATGTTCTGCTCAGTTAGTAACTATATCACTTTTGTAGAAAGAAAACAAAAAACAATTTCACAATGTATTAGGACTTTTAAAATAACCAGTATTTACACATCGGTATTTATCTTCTTATTGCAATATCATTTTGTTTATTATCATTCCAAAACCTTCATGCTTACAAAAATGTATGGAGAATGCAAGAAAATTATTGATTTACACTAACACTTATTTTCAGGTTGGTACTAGAATATTAAATTTTCTTTTTTAATTACAGAAGATAAAGTAAATTTACCTTTTTCCTTAGATGTATCTTTGCAATAAAACCAAGCAATTGGTTGATGAAATTTAATATGACTATTTTTTGAGGCAACCTAATTTTAAGTTTTACAAATGATTGATCAGTAACTTTTACATAACCAGCAGCTGGGGTTCACCCCTCAGTAAGCCTTCAGGAATGATATGAGATTGACTTCCAAAAGCAACTCTATAAGACCATTCCTTCTGCACAATTATGAGTAATATGTTACTAGGAAGAGTATGGCAATTTTATCTCTCCCATTTAGACCTCAAATTTGATGTTATACTTTTCATTTACCTTTTCAATCTTTTCACATGTTTATCTAAGAAATATAGCTTAACCCACATAGACATTTATTTTTATTTCTTTTCCTTCTGCTGCATACATGCATGAGAATGTTTTGGAGACTGGAGGCTCATGCCTGTAGTCTCTGCTATGTGGGAGACTGAGATAGGAGGATTGATTGAGCCCAGGGTAACGGAGAGAGGTTGAAACAGTTTGCAGGGCTAAGAAGAAGACAGGAAGATGTGGGAAAGTTTAGAACATCCTAGGGACTTGTAAATTGGTTTTGACAAAAATGCTGATAGTAATATGGATAATGAAGTCCAGACTGAGGTGCTCTCAGATGGAGATGAGGAACTTCTTGGGAACTGGAAACTGGAGCAAAGGTAACTCTTACTATGCTTTAGCATAGAAACTGATGACATTTTTCTCCTGCCCTAGAGATCTCCTGCATTTTGAGCTTGAGAGAGATTACTTAGGGTATCTGACAAAAGAAAGTTTTAAGCAATAAATTTGTCAAGATGTGACCTTGGTGCTCTTAAAGGGTTTCAGTTTTATGCATTCACAAAGAGATATTTTGGATTTGGAACTTTTTAAAAGTATACTTTAAGTTCTGGGATACATGTGCAGAACATGCAGGTTTGTTACATAGGTATACACGTGGCATGGTGGTTTGCTGCACCCATCAACCCATCATCTACATTAGGTATTTCTCCTAATGCTATCCTTCCCCTAGCCCCCCATCCCTCAACAGGCCCTGGTGTGTGATGTTCCCCTCCCTGTATCTATGTGTTCTCACTGTTCAACTCCCACTTGTGTGAGAAGATGCAGTGTTTGGTTTTCTGTTCCTGTGTTAGTTTGCTGAGAATGAAAGTTTCCAGCTTCATCTGTGTCCCTGCAAAAGACATCATAACTCATCCTTCTTTTATGGTTGCATAGTATTCCATAGTGTATATGCGCCACATTTTCTTTATCCAGTCTATTACTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAGTAAACATATGTGAGCATAGGTCTTTAGAGTAGAATGATTTATAATCCTTTGGGTATATACCCAGTAATAAGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTGAGGAATTTCCACACTGTCTTCCACAATGGTTGGACTAATTTACACTCGCACCAACAGTGTAGAAATATTCCTATTTCTCCACGTCCTCTCCAGCATCTGTTGTCTCCTGACTTTTTAATGATTGTCATTCCAACTGGC	GCCA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4602:HG2_PB_pbsv_7154:HG3_PB_pbsv_6939:HG3_PB_SVrefine2Falcon1Dovetail_4328:HG2_PB_SVrefine2PBcRplusDovetail_9669:HG2_PB_SVrefine2Falcon2Bionano_3602:HG2_10X_SVrefine210Xhap12_5114:HG4_PB_SVrefine2Falcon1Dovetail_4320:HG2_Ill_tnscope_850:HG3_10X_allpass_1474:HG2_10X_allpass_1216:HG2_Ill_MetaSV_4421;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5114:HG2_PB_SVrefine2Falcon2Bionano_3602:HG2_PB_SVrefine2PBcRplusDovetail_9669:HG3_PB_SVrefine2Falcon1Dovetail_4328;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0175466;ClusterMaxSizeDiff=0.0175466;ClusterMaxEditDist=0.0175466;PBcalls=6;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-25421;DistBack=30383;DistForward=83;DistMin=83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:103737465-103762889;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.9999;PctRecOverlap=0.9999;SizeDiff=-2;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=3472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:64:72:0|1:44:3:3:32:./.:0:0:0:0:0/1:62:15:0/1:441:187:25628:.:.
chr6	104124866	HG3_Ill_GATKHC_11955	CAATCCTTTAGCTAGACACAAAAGTTCTCCAAGTTCCCACCAGATTAGCTAGACACAGAGTGCTGATTGGTGCATTTAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5116:HG2_PB_pbsv_7156:HG4_PB_pbsv_7156:HG3_PB_pbsv_6943:HG2_PB_HySA_13253:HG4_Ill_Krunchall_10688:HG4_Ill_GATKHC_12035:HG4_Ill_GATKHCSBGrefine_5063:HG4_Ill_250bpfermikitraw_10081:HG3_Ill_GATKHC_11955:HG3_Ill_250bpfermikitraw_9756:HG2_Ill_svaba_9281:HG2_Ill_GATKHC_11994:HG2_Ill_GATKHCSBGrefine_4993:HG2_Ill_250bpfermikitraw_10070:HG2_Ill_150bpfermikitraw_9478:HG4_PB_SVrefine2PBcRDovetail_3536:HG3_PB_SVrefine2PBcRDovetail_3305:HG3_Ill_SVrefine2DISCOVARDovetail_5439:HG2_PB_SVrefine2PBcRplusDovetail_9671:HG2_PB_SVrefine2PB10Xhap12_5221:HG2_PB_SVrefine2Falcon2Bionano_3604:HG2_PB_SVrefine2Falcon1plusDovetail_10392:HG2_Ill_SVrefine2DISCOVARplusDovetail_11356;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9478:HG2_Ill_250bpfermikitraw_10070:HG2_Ill_GATKHCSBGrefine_4993:HG2_Ill_GATKHC_11994:HG2_Ill_svaba_9281:HG3_Ill_250bpfermikitraw_9756:HG3_Ill_GATKHC_11955:HG4_Ill_250bpfermikitraw_10081:HG4_Ill_GATKHCSBGrefine_5063:HG4_Ill_GATKHC_12035:HG4_Ill_Krunchall_10688;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.0509554;PBcalls=10;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-78;DistBack=20165;DistForward=-31;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=212;REFWIDENED=6:104124832-104125121;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:71:1/1:1:17:3:30:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr6	104127550	HG2_Ill_manta_2071	ATCAGAATATATATATATATATATCAGAATATATATATATATATATATCAGAATATATATATATATATCAGAATATATATATATATCAGAATATATATATATATCAGAATATATATATATATATCAGAAT	CAGA	20	PASS	ClusterIDs=HG2_PB_pbsv_7157:HG4_Ill_GATKHC_12036:HG4_Ill_GATKHCSBGrefine_5064:HG3_Ill_GATKHCSBGrefine_4942:HG3_10X_allpass_1476:HG2_Ill_GATKHC_11995:HG2_Ill_GATKHCSBGrefine_4994:HG2_PB_HySA_13254:HG2_Ill_SpiralSDKrefine_14981:HG4_Ill_manta_1797:HG3_Ill_manta_1705:HG3_Ill_SVrefine2DISCOVARDovetail_5440:HG2_PB_SVrefine2PBcRplusDovetail_9672:HG2_PB_SVrefine2PB10Xhap12_5222:HG2_PB_SVrefine2Falcon2Bionano_3605:HG2_PB_SVrefine2Falcon1plusDovetail_10393:HG2_Ill_manta_2071:HG2_Ill_SVrefine2DISCOVARplusDovetail_11357:HG2_10X_SVrefine210Xhap12_5117:HG4_Ill_Spiral_603:HG3_Ill_Spiral_7884:HG2_Ill_Spiral_521:HG4_Ill_Krunchall_10689:HG3_Ill_Krunchall_10106:HG4_PB_pbsv_7157:HG3_PB_pbsv_6944:HG2_Ill_scalpel_7130:HG2_Ill_150bpfermikitraw_9479;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5117:HG2_Ill_SVrefine2DISCOVARplusDovetail_11357:HG2_Ill_manta_2071:HG2_PB_SVrefine2Falcon1plusDovetail_10393:HG2_PB_SVrefine2Falcon2Bionano_3605:HG2_PB_SVrefine2PB10Xhap12_5222:HG2_PB_SVrefine2PBcRplusDovetail_9672:HG3_Ill_SVrefine2DISCOVARDovetail_5440:HG3_Ill_manta_1705:HG4_Ill_manta_1797;NumExactMatchSVs=10;ClusterMaxShiftDist=0.048;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.048;PBcalls=8;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-126;DistBack=-130;DistForward=-125;DistMin=-130;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=6:104127536-104127695;PctSeqSimilarity=0.9855;PctSizeSimilarity=0.9841;PctRecOverlap=0.8462;SizeDiff=2;StartDistance=15;EndDistance=20;GTMatch=0;TruScore=93;MatchId=3474.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:64:1/1:1:12:1:18:./.:0:0:0:0:1/1:0:56:./.:.:.:.:.:.
chr6	104183184	HG4_Ill_SVrefine2DISCOVARDovetail_5305	GAAAGAAATTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5118:HG4_PB_HySA_10581:HG2_PB_pbsv_7158:HG3_PB_HySA_10983:HG2_PB_HySA_13256:HG3_Ill_Krunchall_10108:HG2_Ill_Krunchall_10360:HG4_PB_assemblyticsfalcon_22875:HG4_Ill_MetaSV_4611:HG2_Ill_tnscope_851:HG4_PB_pbsv_7158:HG4_PB_SVrefine2PBcRDovetail_3537:HG4_PB_SVrefine2Falcon1Dovetail_4323:HG4_Ill_scalpel_6957:HG4_Ill_manta_1798:HG4_Ill_SVrefine2DISCOVARDovetail_5305:HG4_Ill_GATKHCSBGrefine_5066:HG4_10X_allpass_1428:HG3_PB_pbsv_6945:HG3_PB_SVrefine2Falcon1Dovetail_4331:HG3_Ill_SVrefine2DISCOVARDovetail_5441:HG3_Ill_MetaSV_4603:HG3_Ill_GATKHCSBGrefine_4943:HG3_10X_allpass_1477:HG2_PB_SVrefine2PBcRplusDovetail_9673:HG2_PB_SVrefine2PB10Xhap12_5223:HG2_PB_SVrefine2Falcon2Bionano_3606:HG2_PB_SVrefine2Falcon1plusDovetail_10394:HG2_Ill_scalpel_7132:HG2_Ill_manta_2072:HG2_Ill_breakscan11_1045:HG2_Ill_SVrefine2DISCOVARplusDovetail_11358:HG2_Ill_MetaSV_4422:HG2_Ill_GATKHCSBGrefine_4995:HG2_10X_allpass_1217;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5118:HG4_PB_pbsv_7158:HG4_PB_SVrefine2PBcRDovetail_3537:HG4_PB_SVrefine2Falcon1Dovetail_4323:HG4_Ill_scalpel_6957:HG4_Ill_manta_1798:HG4_Ill_SVrefine2DISCOVARDovetail_5305:HG4_Ill_GATKHCSBGrefine_5066:HG4_10X_allpass_1428:HG3_PB_pbsv_6945:HG3_PB_SVrefine2Falcon1Dovetail_4331:HG3_Ill_SVrefine2DISCOVARDovetail_5441:HG3_Ill_MetaSV_4603:HG3_Ill_GATKHCSBGrefine_4943:HG3_10X_allpass_1477:HG2_PB_SVrefine2PBcRplusDovetail_9673:HG2_PB_SVrefine2PB10Xhap12_5223:HG2_PB_SVrefine2Falcon2Bionano_3606:HG2_PB_SVrefine2Falcon1plusDovetail_10394:HG2_Ill_scalpel_7132:HG2_Ill_manta_2072:HG2_Ill_breakscan11_1045:HG2_Ill_SVrefine2DISCOVARplusDovetail_11358:HG2_Ill_MetaSV_4422:HG2_Ill_GATKHCSBGrefine_4995:HG2_10X_allpass_1217;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0716511;ClusterMaxSizeDiff=0.0716511;ClusterMaxEditDist=0.0716511;PBcalls=14;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=40921;DistForward=-326;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:104183185-104183521;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:52:./.:3:9:0:9:./.:0:0:0:0:1/1:0:36:./.:1:16:.:.:.
chr6	104188329	HG3_Ill_Krunchall_10109	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_6946:HG2_PB_HySA_13257:HG4_PB_HySA_10582:HG4_Ill_Krunchall_10691:HG4_Ill_GATKHC_12038:HG4_Ill_250bpfermikitraw_10083:HG4_Ill_150bpfermikitraw_9678:HG3_Ill_Krunchall_10109:HG3_Ill_GATKHC_11957:HG3_Ill_GATKHCSBGrefine_4944:HG3_Ill_250bpfermikitraw_9759:HG3_Ill_150bpfermikitraw_9517:HG2_Ill_manta_2073:HG2_Ill_SpiralSDKrefine_14983:HG2_Ill_Krunchall_10361:HG2_Ill_GATKHC_11997:HG2_Ill_GATKHCSBGrefine_4996:HG2_Ill_250bpfermikitraw_10072:HG2_Ill_150bpfermikitraw_9481:HG2_10X_allpass_1218:HG4_PB_assemblyticsfalcon_22876:HG4_PB_pbsv_7159:HG4_Ill_GATKHCSBGrefine_5067:HG4_Ill_FB_6640:HG4_PB_SVrefine2PBcRDovetail_3538:HG4_Ill_SVrefine2DISCOVARDovetail_5306:HG3_PB_SVrefine2PBcRDovetail_3307:HG3_PB_SVrefine2Falcon1Dovetail_4332:HG3_Ill_SVrefine2DISCOVARDovetail_5442:HG2_PB_SVrefine2PBcRplusDovetail_9674:HG2_PB_SVrefine2PB10Xhap12_5224:HG2_PB_SVrefine2Falcon2Bionano_3607:HG2_PB_SVrefine2Falcon1plusDovetail_10395:HG2_Ill_SVrefine2DISCOVARplusDovetail_11359:HG2_10X_SVrefine210Xhap12_5119:HG2_PB_pbsv_7159;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_1218:HG2_Ill_150bpfermikitraw_9481:HG2_Ill_250bpfermikitraw_10072:HG2_Ill_GATKHCSBGrefine_4996:HG2_Ill_GATKHC_11997:HG2_Ill_Krunchall_10361:HG2_Ill_SpiralSDKrefine_14983:HG2_Ill_manta_2073:HG3_Ill_150bpfermikitraw_9517:HG3_Ill_250bpfermikitraw_9759:HG3_Ill_GATKHCSBGrefine_4944:HG3_Ill_GATKHC_11957:HG3_Ill_Krunchall_10109:HG4_Ill_150bpfermikitraw_9678:HG4_Ill_250bpfermikitraw_10083:HG4_Ill_GATKHC_12038:HG4_Ill_Krunchall_10691;NumExactMatchSVs=17;ClusterMaxShiftDist=0.218487;ClusterMaxSizeDiff=0.218487;ClusterMaxEditDist=0.218487;PBcalls=13;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-64;DistBack=-66;DistForward=10158;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=49;REFWIDENED=6:104188310-104188422;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3476.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:53:./.:1:5:1:1:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr6	105221951	HG2_PB_SVrefine2PB10Xhap12_5229	TTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4425:HG2_PB_assemblyticsfalcon_23498:HG3_PB_assemblyticsfalcon_23362:HG3_PB_SVrefine2PBcRDovetail_3311:HG2_Ill_Krunchall_10370:HG4_PB_SVrefine2Falcon1Dovetail_4329:HG3_PB_SVrefine2Falcon1Dovetail_4338:HG3_PB_pbsv_6953:HG3_Ill_scalpel_7231:HG3_Ill_manta_1710:HG3_Ill_GATKHCSBGrefine_4949:HG3_10X_allpass_1479:HG2_PB_pbsv_7166:HG2_PB_SVrefine2PB10Xhap12_5229:HG2_PB_SVrefine2Falcon1plusDovetail_10399:HG2_Ill_scalpel_7137:HG2_Ill_manta_2074:HG2_Ill_SVrefine2DISCOVARplusDovetail_11362:HG2_Ill_GATKHCSBGrefine_4999:HG2_10X_allpass_1219:HG2_10X_SVrefine210Xhap12_5125:HG2_Ill_breakscan11_1046:HG2_Ill_tnscope_852;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5125:HG2_10X_allpass_1219:HG2_Ill_GATKHCSBGrefine_4999:HG2_Ill_SVrefine2DISCOVARplusDovetail_11362:HG2_Ill_manta_2074:HG2_Ill_scalpel_7137:HG2_PB_SVrefine2Falcon1plusDovetail_10399:HG2_PB_SVrefine2PB10Xhap12_5229:HG2_PB_pbsv_7166:HG3_10X_allpass_1479:HG3_Ill_GATKHCSBGrefine_4949:HG3_Ill_manta_1710:HG3_Ill_scalpel_7231:HG3_PB_pbsv_6953;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0841424;ClusterMaxSizeDiff=0.0841424;ClusterMaxEditDist=0.0841424;PBcalls=9;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=34845;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=290;REFWIDENED=6:105221952-105222554;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:0|1:22:1:2:29:./.:0:0:0:0:0/1:16:24:0/1:20:7:.:.:.
chr6	105260826	HG2_PB_pbsv_7167	TGCACAAAGTGAACAGGGAGGCTCTGGACTGGGAGACAAGACACACAGGTAGAGCAAAGATGAGGAGCCATCGTGAAAACAACAAATTAAGTGAAAACCTCCAGCCTCCATGTTCCAACTAGGCTCCCAGAAATCCAGCAGGCAGGCTTAAAAATCTCAAGTAGAAGGAATTAAAAGCTTCCTCTCAAGACTTGCATCAGAAAAGAATCTTACAGATATTGGCATTAGAAAGTCCCCAGTGAAACAGCTCAGTTCATCCAGACATGGTGGCTCATGCCTGTAATTCTAAGACTTTGGAAAACCAAGGTGGAAAGATCATTTAAGGCCAGGAGTTCAAGACCAGCCTAGGCAATTTAGAGAGATCCCATTTCCACAACAAAATTTTAAAATTAGCCATGCATGGTGCTGCATGCAAGACGCTATCTGTAAAGCAAGACCCTATCTCTAAAAAGAAACAAAAATTAAAAATAAAGAAACAGCCCAATTCGGGACAATGGGTCTATAGCAGTCATCCCCAACCAAGGTTAAATTTTCCCCTGGGAACATGAGGCAACTTTTTTATTTTCATGACCAGGGAAGGGAAAATGCTATTGGCAGCTAGTGGGTAGAGGTCAGGGATGCAGCTAAATATCCTAAAATTCAGATGACAGCCCCCACAACAAAGAATTATCAGATCCAAAATATCAACAGTGTTGAGACCAAGAAACATTGGTGTACAGTCAAACCAAGTAGTCAACAAACTCAACTCATGTACACAACGCTTCCAGCCAACATTTGAGTGCCTCACCATTACACATGAATGAACAGACAATATTAAAAATACAACTGAAGCAGGCCTCTAACCTGAAAAACAAAAATTACAACTGAAAAATGAAACTCAGAATAACAAAGACAGTAAAGGGAACCAAAGAAAACAACAAAAATTAGAAAAGTAACTGATAACCTCGAACAGAAAAGAAATTATACCATGGAATGATAAAAGGATGTTGGGTAGAAAATATTTAGGAAATGAGAAATCAAAAATACAATGCAATAAATAAAAATTCAACAGAAGTTTAAAAAGAAAATGTTCAGGAATTCTACAAAGTAGAATAAAAAGACAAAGTAGAAAATAGGAAAGATGAGAAAATTTGTGAATCAATCAAGGGAGACATACTGCAGAAAATAAGAATAAAGAAAAGAAAGGGGGTGAGGGACCAAAGGGGAATAACCAAGAAATAATACCAAAAAAGTTCCCAGAACTGAAAGACATCAGGTGCCAGGTTTAAAAGGCTCAACACGTGTCTAGTCTATTAAATCAAAAGACCTTCAACGAGGCATGTCAAAGTGAAATTTCATGATAACATCAGGGATAAGAGATTCCAGAGATAAACAGAAATCATGTGGGCATTAAAACTTCTCAACAGCAACACAGAAATCTAAAAGGTAAAAAGCCTTCAAAATTGTAAGATAAATTATATGCAGAATTCTATAGCCAACTACACTATTATTCAAATAGATGGTTATAAATAAAAAACATGTTTAACTATTTTATAAGATTTTTTAAATTATCTTCAATGCACCTTTTCTCAAGAAGCTACTGAAGCATATCCTCCTCCAAAGAAAGAGAATAAACCATAATAGAAGATATGGAATCTAGAATATGGAGATCAAACATGGGAGAGACACTAAGATTATTTCTAGGTTTAGAGGGTGATATGGGTTGGATTTGTGTCCCTGCCAAAATCTCCTGTTGAATTGGAGGAGGGACCTGGTGAGAGGTGACCAGAGCATGGGAGCAGATTTCCCCCTTGCTGCTCTCATGAGAGCTCATGGTTTAAAAGTGTGTGGCACATCCCCCCTCACGCTCTTTCTCCCTCTCTCCTGCCACCATCTGAAGAAGATGCTTGCTTCCCCCTTTGCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCACAGTCATGCTTCCTGTTAAGCCAGCAGAACTCTGAGTCAATTAAACATCTTTTCTTCACAAATTACTCAGTCTCAAGTAGTTCTTTATATCAGTGTGAAAAATTGACTAATATAGAAAATCAGTACCAGGAGTGGGACACTCCTATAAAGACACTTGAAAATGTGGAAGCGACTTTGGAACTGGGTAAGGGGCAGAGGTTGGAACAGTTTGGAGGGCTCTGAAGAAGACAGTAAGATGTGGGAAAGTTTGGAACTTCCCAGAGACTTGTTGAATGGTTTTGATCAAACTGCTGATAGTGATATGGACAATGACGTCCAGGCTGAGGTGATCTCAGATGGAGATGAGGAACTTATTGGCAACTGGAGTAAAGATCACTCTTGCTATGCTTTAGCAAAAAGAAACTGGAAGCATTTTGCCCCTGCCCTAGAGATCTGTGAAACTTTAAACTTGAAAGAGATGAATTAGGGTATCTGGTGGAAGAAATTTTTTTTTTTTTTTGACACAAAGTCTCACTCTGTCTCCTAGGCTGGAGTGTAATGGCATGATCTCAACTCACTGCAACCTCCACCTCCCAGGTTCCAGTGATTCTCCCGCCTCCCAGGTAGCTGGGATTATAGGCGTGCGCCACCACACCCAGCTAATTTTTTCTGTTTTTAGTAGAGATGGGGTCTCACCCTGTTGGCCAGGCTGGTCCTTAAGTCCTGATCTCAAGTGATCCACCCACCTTGGCCTCCTAAAGTGCTGGGATTACAGGCCTGACCCAGCACACCCAGACTATGGTGGAAGAAATTTCTAACCAGCAAAGCATTCAAGATGTGACCTGGCTTATTCTGAAAGCATTCACTTACATGCATTCACAAAGAGATGGTTTGAAATTGGAATATGTTTAAAAGGGAAACAGAGGGCCAGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAGCTTG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_7165:HG2_10X_allpass_1220:HG2_PB_SVrefine2PB10Xhap12_5230:HG2_PB_PB10Xdip_24526:HG4_10X_allpass_1429:HG4_PB_assemblyticsfalcon_22887:HG2_Ill_MetaSV_4426:HG2_Ill_tnscope_853:HG4_PB_SVrefine2PBcRDovetail_3542:HG4_PB_SVrefine2Falcon1Dovetail_4330:HG4_Ill_SVrefine2DISCOVARDovetail_5312:HG4_Ill_MetaSV_4614:HG4_Ill_GATKHCSBGrefine_5071:HG3_PB_assemblyticsfalcon_23363:HG3_PB_SVrefine2Falcon1Dovetail_4339:HG2_PB_pbsv_7167:HG2_PB_assemblyticsfalcon_23499:HG2_PB_SVrefine2PBcRplusDovetail_9679:HG2_PB_SVrefine2Falcon2Bionano_3611:HG2_PB_SVrefine2Falcon1plusDovetail_10400:HG2_10X_SVrefine210Xhap12_5126;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5126:HG2_PB_SVrefine2Falcon1plusDovetail_10400:HG2_PB_SVrefine2Falcon2Bionano_3611:HG2_PB_SVrefine2PBcRplusDovetail_9679:HG2_PB_assemblyticsfalcon_23499:HG2_PB_pbsv_7167:HG3_PB_SVrefine2Falcon1Dovetail_4339:HG3_PB_assemblyticsfalcon_23363:HG4_Ill_GATKHCSBGrefine_5071:HG4_Ill_MetaSV_4614:HG4_Ill_SVrefine2DISCOVARDovetail_5312:HG4_PB_SVrefine2Falcon1Dovetail_4330:HG4_PB_SVrefine2PBcRDovetail_3542;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0182927;ClusterMaxSizeDiff=0.0182927;ClusterMaxEditDist=0.0182927;PBcalls=13;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2931;DistBack=13040;DistForward=16087;DistMin=13040;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:105260827-105263759;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:21:./.:7:11:29:2:./.:0:0:0:0:0/1:57:22:0/1:234:96:2951:.:.
chr6	105567837	HG2_10X_SVrefine210Xhap12_5127	TAAAAACATGGATTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGAAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_11000:HG4_Ill_Krunchall_10699:HG3_Ill_Krunchall_10119:HG2_Ill_Krunchall_10371:HG2_PB_assemblyticsfalcon_23500:HG4_PB_assemblyticsfalcon_22888:HG3_PB_assemblyticsfalcon_23364:HG2_PB_assemblyticsPBcR_22734:HG4_PB_HySA_10593:HG4_PB_pbsv_7167:HG2_PB_pbsv_7169:HG2_PB_SVrefine2Falcon1plusDovetail_10401:HG2_PB_HySA_13269:HG4_Ill_MetaSV_4615:HG3_Ill_MetaSV_4608:HG2_Ill_tnscope_854:HG2_Ill_MetaSV_4427:HG4_PB_SVrefine2PBcRDovetail_3543:HG4_PB_SVrefine2Falcon1Dovetail_4331:HG4_Ill_svaba_9379:HG4_Ill_scalpel_6963:HG4_Ill_SVrefine2DISCOVARDovetail_5314:HG4_Ill_GATKHCSBGrefine_5075:HG4_10X_allpass_1430:HG3_PB_pbsv_6955:HG3_PB_SVrefine2PBcRDovetail_3313:HG3_PB_SVrefine2Falcon1Dovetail_4340:HG3_Ill_svaba_9367:HG3_Ill_scalpel_7232:HG3_Ill_SVrefine2DISCOVARDovetail_5447:HG3_Ill_GATKHCSBGrefine_4954:HG3_10X_allpass_1480:HG2_PB_SVrefine2PBcRplusDovetail_9680:HG2_PB_SVrefine2PB10Xhap12_5231:HG2_PB_SVrefine2Falcon2Bionano_3612:HG2_Ill_svaba_9289:HG2_Ill_scalpel_7138:HG2_Ill_manta_2075:HG2_Ill_breakscan11_1047:HG2_Ill_SVrefine2DISCOVARplusDovetail_11365:HG2_Ill_GATKHCSBGrefine_5002:HG2_10X_allpass_1221:HG2_10X_SVrefine210Xhap12_5127;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5127:HG2_10X_allpass_1221:HG2_Ill_GATKHCSBGrefine_5002:HG2_Ill_SVrefine2DISCOVARplusDovetail_11365:HG2_Ill_breakscan11_1047:HG2_Ill_manta_2075:HG2_Ill_scalpel_7138:HG2_Ill_svaba_9289:HG2_PB_SVrefine2Falcon2Bionano_3612:HG2_PB_SVrefine2PB10Xhap12_5231:HG2_PB_SVrefine2PBcRplusDovetail_9680:HG3_10X_allpass_1480:HG3_Ill_GATKHCSBGrefine_4954:HG3_Ill_SVrefine2DISCOVARDovetail_5447:HG3_Ill_scalpel_7232:HG3_Ill_svaba_9367:HG3_PB_SVrefine2Falcon1Dovetail_4340:HG3_PB_SVrefine2PBcRDovetail_3313:HG3_PB_pbsv_6955:HG4_10X_allpass_1430:HG4_Ill_GATKHCSBGrefine_5075:HG4_Ill_SVrefine2DISCOVARDovetail_5314:HG4_Ill_scalpel_6963:HG4_Ill_svaba_9379:HG4_PB_SVrefine2Falcon1Dovetail_4331:HG4_PB_SVrefine2PBcRDovetail_3543;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0971168;ClusterMaxSizeDiff=0.0971168;ClusterMaxEditDist=0.0971168;PBcalls=18;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=10198;DistForward=37692;DistMin=10198;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:105567838-105568188;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:75:./.:0:5:0:2:./.:0:0:0:0:1/1:0:52:0/1:2:10:.:.:.
chr6	106983622	HG4_10X_allpass_1432	AAGCCACTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTG	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_856:HG3_PB_HySA_11010:HG3_PB_assemblyticsfalcon_23381:HG2_PB_assemblyticsfalcon_23518:HG2_PB_assemblyticsPBcR_22748:HG4_Ill_Krunchall_10710:HG4_PB_assemblyticsfalcon_22906:HG3_Ill_Krunchall_10132:HG2_Ill_Krunchall_10384:HG4_Ill_Spiral_606:HG2_Ill_Spiral_524:HG4_PB_pbsv_7176:HG4_PB_SVrefine2PBcRDovetail_3548:HG4_PB_SVrefine2Falcon1Dovetail_4337:HG4_Ill_scalpel_6973:HG4_Ill_manta_1802:HG4_Ill_SVrefine2DISCOVARDovetail_5322:HG4_Ill_GATKHCSBGrefine_5082:HG4_10X_allpass_1432:HG3_PB_pbsv_6960:HG3_PB_SVrefine2PBcRDovetail_3318:HG3_PB_SVrefine2Falcon1Dovetail_4346:HG3_Ill_scalpel_7240:HG3_Ill_manta_1713:HG3_Ill_SVrefine2DISCOVARDovetail_5453:HG3_Ill_MetaSV_4610:HG3_Ill_GATKHCSBGrefine_4960:HG3_10X_allpass_1482:HG2_PB_pbsv_7177:HG2_PB_SVrefine2PBcRplusDovetail_9686:HG2_PB_SVrefine2PB10Xhap12_5238:HG2_PB_SVrefine2Falcon2Bionano_3617:HG2_PB_SVrefine2Falcon1plusDovetail_10407:HG2_PB_HySA_13288:HG2_Ill_scalpel_7144:HG2_Ill_manta_2077:HG2_Ill_breakscan11_1048:HG2_Ill_SpiralSDKrefine_14998:HG2_Ill_SVrefine2DISCOVARplusDovetail_11368:HG2_Ill_MetaSV_4430:HG2_Ill_GATKHCSBGrefine_5009:HG2_10X_allpass_1224:HG2_10X_SVrefine210Xhap12_5136:HG4_PB_HySA_10606:HG4_Ill_MetaSV_4618;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5136:HG2_10X_allpass_1224:HG2_Ill_GATKHCSBGrefine_5009:HG2_Ill_MetaSV_4430:HG2_Ill_SVrefine2DISCOVARplusDovetail_11368:HG2_Ill_SpiralSDKrefine_14998:HG2_Ill_breakscan11_1048:HG2_Ill_manta_2077:HG2_Ill_scalpel_7144:HG2_PB_HySA_13288:HG2_PB_SVrefine2Falcon1plusDovetail_10407:HG2_PB_SVrefine2Falcon2Bionano_3617:HG2_PB_SVrefine2PB10Xhap12_5238:HG2_PB_SVrefine2PBcRplusDovetail_9686:HG2_PB_pbsv_7177:HG3_10X_allpass_1482:HG3_Ill_GATKHCSBGrefine_4960:HG3_Ill_MetaSV_4610:HG3_Ill_SVrefine2DISCOVARDovetail_5453:HG3_Ill_manta_1713:HG3_Ill_scalpel_7240:HG3_PB_SVrefine2Falcon1Dovetail_4346:HG3_PB_SVrefine2PBcRDovetail_3318:HG3_PB_pbsv_6960:HG4_10X_allpass_1432:HG4_Ill_GATKHCSBGrefine_5082:HG4_Ill_SVrefine2DISCOVARDovetail_5322:HG4_Ill_manta_1802:HG4_Ill_scalpel_6973:HG4_PB_SVrefine2Falcon1Dovetail_4337:HG4_PB_SVrefine2PBcRDovetail_3548:HG4_PB_pbsv_7176;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0922099;ClusterMaxSizeDiff=0.0922099;ClusterMaxEditDist=0.0922099;PBcalls=18;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=16754;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:106983623-106983955;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3480.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:1/1:2:29:1:24:./.:0:0:0:0:1/1:0:51:./.:1:17:.:.:.
chr6	108255706	HG2_PB_SVrefine2PBcRplusDovetail_9691	GAGCCCCTCCGCCCGGCAGCCGCCCCGTCTGAGAAGTGAGGAGCCCCTACGCCTGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCCCCGCCAGGCCAGCCACCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGCAGGGAGGTGGGGGGGGTCAG	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4352:HG4_PB_pbsv_7186:HG4_Ill_MetaSV_4623:HG2_Ill_MetaSV_4434:HG2_Ill_SpiralSDKrefine_15008:HG3_PB_pbsv_6968:HG2_PB_pbsv_7183:HG2_PB_SVrefine2Falcon1plusDovetail_10412:HG3_PB_SVrefine2PBcRDovetail_3323:HG4_PB_SVrefine2Falcon1Dovetail_4344:HG3_Ill_SVrefine2DISCOVARDovetail_5461:HG2_PB_SVrefine2PBcRplusDovetail_9691:HG2_PB_SVrefine2PB10Xhap12_5242:HG2_PB_SVrefine2Falcon2Bionano_3623:HG2_Ill_SVrefine2DISCOVARplusDovetail_11374;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11374:HG2_PB_SVrefine2Falcon2Bionano_3623:HG2_PB_SVrefine2PB10Xhap12_5242:HG2_PB_SVrefine2PBcRplusDovetail_9691:HG3_Ill_SVrefine2DISCOVARDovetail_5461:HG4_PB_SVrefine2Falcon1Dovetail_4344;NumExactMatchSVs=6;ClusterMaxShiftDist=0.200803;ClusterMaxSizeDiff=0.200803;ClusterMaxEditDist=0.248;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-228;DistBack=-1;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=470;REFWIDENED=6:108255704-108256404;PctSeqSimilarity=0.8537;PctSizeSimilarity=0.9744;PctRecOverlap=0.4681;SizeDiff=-6;StartDistance=-119;EndDistance=-125;GTMatch=0;TruScore=76;MatchId=3481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:46:1/1:3:16:0:11:./.:0:0:0:0:0/0:16:0:./.:.:.:.:.:.
chr6	108266112	HG3_Ill_manta_1716	CAAAAATCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCTAGAACCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5141:HG4_PB_assemblyticsfalcon_22927:HG4_PB_pbsv_7187:HG3_PB_pbsv_6969:HG2_PB_pbsv_7184:HG3_PB_assemblyticsfalcon_23399:HG4_PB_HySA_10622:HG3_PB_HySA_11032:HG4_Ill_MetaSV_4624:HG3_Ill_MetaSV_4614:HG2_PB_HySA_13311:HG2_Ill_MetaSV_4435:HG4_Ill_scalpel_6981:HG4_Ill_manta_1806:HG4_Ill_GATKHCSBGrefine_5088:HG4_10X_allpass_1434:HG3_Ill_scalpel_7251:HG3_Ill_manta_1716:HG3_Ill_GATKHCSBGrefine_4967:HG3_10X_allpass_1485:HG2_Ill_scalpel_7152:HG2_Ill_manta_2080:HG2_Ill_SVrefine2DISCOVARplusDovetail_11376:HG2_Ill_GATKHCSBGrefine_5014:HG2_10X_allpass_1226:HG2_Ill_breakscan11_1049:HG4_PB_SVrefine2Falcon1Dovetail_4345:HG4_Ill_SVrefine2DISCOVARDovetail_5330:HG3_PB_SVrefine2PBcRDovetail_3324:HG3_PB_SVrefine2Falcon1Dovetail_4353:HG3_Ill_SVrefine2DISCOVARDovetail_5462:HG2_PB_SVrefine2PBcRplusDovetail_9692:HG2_PB_SVrefine2PB10Xhap12_5243:HG2_PB_SVrefine2Falcon2Bionano_3624:HG2_PB_SVrefine2Falcon1plusDovetail_10413:HG2_Ill_SVrefine2DISCOVARplusDovetail_11375;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_1226:HG2_Ill_GATKHCSBGrefine_5014:HG2_Ill_SVrefine2DISCOVARplusDovetail_11376:HG2_Ill_manta_2080:HG2_Ill_scalpel_7152:HG3_10X_allpass_1485:HG3_Ill_GATKHCSBGrefine_4967:HG3_Ill_manta_1716:HG3_Ill_scalpel_7251:HG4_10X_allpass_1434:HG4_Ill_GATKHCSBGrefine_5088:HG4_Ill_manta_1806:HG4_Ill_scalpel_6981;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0840336;ClusterMaxSizeDiff=0.0840336;ClusterMaxEditDist=0.0840336;PBcalls=15;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-303;DistBack=-110;DistForward=-293;DistMin=-293;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8714;REFWIDENED=6:108256275-108275125;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3482.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:0:15:0:13:./.:0:0:0:0:1/1:0:33:0/1:2:17:.:.:.
chr6	111295210	HG2_Ill_GATKHCSBGrefine_5018	CAAAAAACATAAAAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTATAACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCCCTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAAAAAAGA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_7198:HG2_PB_assemblyticsPBcR_22786:HG4_Ill_Krunchall_10743:HG2_Ill_Krunchall_10416:HG2_Ill_tnscope_858:HG2_Ill_MetaSV_4440:HG4_PB_HySA_10634:HG4_Ill_GATKHCSBGrefine_5092:HG4_10X_allpass_1435:HG2_PB_pbsv_7198:HG2_PB_SVrefine2PBcRplusDovetail_9698:HG2_PB_SVrefine2PB10Xhap12_5250:HG2_Ill_GATKHCSBGrefine_5018:HG2_10X_SVrefine210Xhap12_5150;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5150:HG2_Ill_GATKHCSBGrefine_5018:HG2_PB_SVrefine2PB10Xhap12_5250:HG2_PB_SVrefine2PBcRplusDovetail_9698:HG2_PB_pbsv_7198:HG4_10X_allpass_1435:HG4_Ill_GATKHCSBGrefine_5092:HG4_PB_HySA_10634;NumExactMatchSVs=8;ClusterMaxShiftDist=0.179357;ClusterMaxSizeDiff=0.179357;ClusterMaxEditDist=0.179357;PBcalls=6;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=-333;DistForward=-293;DistMin=-333;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=6:111295211-111295547;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:23:0|1:32:1:2:20:./.:0:0:0:0:./.:30:4:0/1:28:6:.:.:.
chr6	113350665	HG4_Ill_GATKHCSBGrefine_5101	TATACATACATATACATATGCATATATGTATACATACATATACATATGCATATATGTATACATACATATACATATGCATATATGTATACATACATATACATATGC	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_10758:HG3_PB_HySA_11051:HG2_PB_HySA_13344:HG4_Ill_Krunchall_10759:HG3_Ill_Krunchall_10169:HG2_Ill_Krunchall_10432:HG4_PB_pbsv_7206:HG4_Ill_GATKHC_12110:HG4_Ill_GATKHCSBGrefine_5101:HG3_Ill_GATKHC_12028:HG3_Ill_GATKHCSBGrefine_4975:HG2_Ill_GATKHC_12071:HG2_Ill_GATKHCSBGrefine_5024:HG4_Ill_GATKHC_12109:HG4_Ill_GATKHCSBGrefine_5100:HG2_PB_pbsv_7207:HG3_Ill_MetaSV_4617:HG2_PB_HySA_13343:HG4_Ill_250bpfermikitraw_10146:HG3_Ill_250bpfermikitraw_9813:HG3_Ill_150bpfermikitraw_9569:HG2_Ill_Krunchall_10431:HG3_PB_pbsv_6981:HG4_PB_HySA_10647;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5024:HG2_Ill_GATKHC_12071:HG3_Ill_GATKHCSBGrefine_4975:HG3_Ill_GATKHC_12028:HG4_Ill_GATKHCSBGrefine_5101:HG4_Ill_GATKHC_12110;NumExactMatchSVs=6;ClusterMaxShiftDist=0.211538;ClusterMaxSizeDiff=0.211538;ClusterMaxEditDist=0.211538;PBcalls=7;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-104;DistBack=16707;DistForward=-21;DistMin=-21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=6:113350664-113350773;PctSeqSimilarity=0.9429;PctSizeSimilarity=0.9286;PctRecOverlap=0.7876;SizeDiff=-8;StartDistance=24;EndDistance=16;GTMatch=0;TruScore=88;MatchId=3485.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:16:50:1/1:2:12:7:26:./.:0:0:0:0:0/1:20:12:./.:.:.:.:.:.
chr6	113899597	HG3_Ill_GATKHCSBGrefine_4982	CTTTCTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTTCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5158:HG3_PB_HySA_11063:HG3_Ill_svaba_9424:HG3_Ill_GATKHC_12038:HG3_Ill_GATKHCSBGrefine_4982:HG3_Ill_250bpfermikitraw_9822:HG3_Ill_150bpfermikitraw_9575:HG3_Ill_GATKHC_12037:HG2_Ill_GATKHC_12079:HG2_Ill_GATKHCSBGrefine_5029:HG3_PB_pbsv_6986:HG2_PB_pbsv_7214:HG4_PB_SVrefine2Falcon1Dovetail_4357:HG3_Ill_SVrefine2DISCOVARDovetail_5480:HG2_PB_SVrefine2Falcon1plusDovetail_10425:HG2_Ill_SVrefine2DISCOVARplusDovetail_11394;NumClusterSVs=16;ExactMatchIDs=HG3_Ill_150bpfermikitraw_9575:HG3_Ill_250bpfermikitraw_9822:HG3_Ill_GATKHCSBGrefine_4982:HG3_Ill_GATKHC_12038:HG3_Ill_svaba_9424;NumExactMatchSVs=5;ClusterMaxShiftDist=0.211538;ClusterMaxSizeDiff=0.211538;ClusterMaxEditDist=0.211538;PBcalls=5;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=-95;DistBack=-29;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=164;REFWIDENED=6:113899553-113899811;PctSeqSimilarity=0.96;PctSizeSimilarity=0.9223;PctRecOverlap=0.9231;SizeDiff=-8;StartDistance=8;EndDistance=0;GTMatch=0;TruScore=93;MatchId=3486.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:0|1:21:5:2:18:./.:0:0:0:0:0/1:12:17:./.:.:.:.:.:.
chr6	115658680	HG2_Ill_150bpfermikitraw_9566	TATATATACATATATATATACACATATATATATATACATATATGTATATATATATACATATATATATAC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_6994:HG2_PB_HySA_13382:HG4_PB_HySA_10666:HG4_Ill_svaba_9455:HG4_Ill_scalpel_7014:HG4_Ill_manta_1814:HG4_Ill_Krunchall_10780:HG4_Ill_GATKHC_12135:HG4_Ill_GATKHCSBGrefine_5117:HG4_Ill_250bpfermikitraw_10166:HG4_Ill_150bpfermikitraw_9760:HG3_Ill_svaba_9435:HG3_Ill_manta_1723:HG3_Ill_Krunchall_10190:HG3_Ill_GATKHC_12055:HG3_Ill_GATKHCSBGrefine_4989:HG3_Ill_250bpfermikitraw_9841:HG3_Ill_150bpfermikitraw_9589:HG2_Ill_svaba_9365:HG2_Ill_scalpel_7188:HG2_Ill_manta_2092:HG2_Ill_Krunchall_10459:HG2_Ill_GATKHC_12094:HG2_Ill_GATKHCSBGrefine_5037:HG2_Ill_250bpfermikitraw_10157:HG2_Ill_150bpfermikitraw_9566:HG4_PB_assemblyticsfalcon_22974:HG3_PB_assemblyticsfalcon_23444:HG2_PB_pbsv_7223:HG4_PB_pbsv_7223:HG2_PB_SVrefine2Falcon1plusDovetail_10430:HG4_Ill_SVrefine2DISCOVARDovetail_5351:HG3_Ill_SVrefine2DISCOVARDovetail_5496:HG2_PB_SVrefine2PBcRplusDovetail_9709:HG2_PB_SVrefine2PB10Xhap12_5262:HG2_Ill_SVrefine2DISCOVARplusDovetail_11403:HG2_10X_SVrefine210Xhap12_5164;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9566:HG2_Ill_250bpfermikitraw_10157:HG2_Ill_GATKHCSBGrefine_5037:HG2_Ill_GATKHC_12094:HG2_Ill_Krunchall_10459:HG2_Ill_manta_2092:HG2_Ill_scalpel_7188:HG2_Ill_svaba_9365:HG3_Ill_150bpfermikitraw_9589:HG3_Ill_250bpfermikitraw_9841:HG3_Ill_GATKHCSBGrefine_4989:HG3_Ill_GATKHC_12055:HG3_Ill_Krunchall_10190:HG3_Ill_manta_1723:HG3_Ill_svaba_9435:HG4_Ill_150bpfermikitraw_9760:HG4_Ill_250bpfermikitraw_10166:HG4_Ill_GATKHCSBGrefine_5117:HG4_Ill_GATKHC_12135:HG4_Ill_Krunchall_10780:HG4_Ill_manta_1814:HG4_Ill_scalpel_7014:HG4_Ill_svaba_9455;NumExactMatchSVs=23;ClusterMaxShiftDist=0.119403;ClusterMaxSizeDiff=0.119403;ClusterMaxEditDist=0.119403;PBcalls=10;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=-68;DistBack=-63;DistForward=-52;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=40;REFWIDENED=6:115658660-115658767;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3487.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:13:65:1/1:8:28:4:23:./.:0:0:0:0:1/1:0:48:./.:.:.:.:.:.
chr6	116279797	HG3_Ill_GATKHCSBGrefine_4991	GGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_7224:HG4_Ill_GATKHC_12137:HG4_Ill_GATKHCSBGrefine_5118:HG3_Ill_GATKHC_12059:HG3_Ill_GATKHCSBGrefine_4992:HG2_Ill_GATKHC_12096:HG2_Ill_GATKHCSBGrefine_5038:HG3_Ill_manta_1724:HG3_Ill_GATKHC_12058:HG3_Ill_GATKHCSBGrefine_4991:HG3_Ill_250bpfermikitraw_9844:HG3_Ill_150bpfermikitraw_9592:HG2_PB_SVrefine2PB10Xhap12_5263:HG4_PB_pbsv_7224:HG4_Ill_Krunchall_10782:HG3_PB_pbsv_6996;NumClusterSVs=16;ExactMatchIDs=HG3_Ill_150bpfermikitraw_9592:HG3_Ill_250bpfermikitraw_9844:HG3_Ill_GATKHCSBGrefine_4991:HG3_Ill_GATKHC_12058:HG3_Ill_manta_1724;NumExactMatchSVs=5;ClusterMaxShiftDist=0.296774;ClusterMaxSizeDiff=0.296774;ClusterMaxEditDist=0.296774;PBcalls=4;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=8;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-88;DistBack=102924;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=127;REFWIDENED=6:116279791-116280005;PctSeqSimilarity=0.9691;PctSizeSimilarity=0.9318;PctRecOverlap=0.4382;SizeDiff=6;StartDistance=-50;EndDistance=-44;GTMatch=0;TruScore=77;MatchId=3488.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:0|1:15:4:2:18:./.:0:0:0:0:0/1:16:10:./.:.:.:.:.:.
chr6	116750813	HG3_Ill_scalpel_7282	TAGAAATATGAGGAGTTGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCGTCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1050:HG4_10X_allpass_1438:HG4_PB_assemblyticsfalcon_22979:HG3_PB_assemblyticsfalcon_23450:HG2_PB_assemblyticsfalcon_23585:HG2_PB_assemblyticsPBcR_22832:HG4_Ill_Krunchall_10784:HG3_Ill_Krunchall_10196:HG4_PB_HySA_10669:HG2_PB_pbsv_7227:HG4_PB_pbsv_7227:HG4_Ill_MetaSV_4634:HG3_Ill_MetaSV_4625:HG2_Ill_tnscope_859:HG2_Ill_MetaSV_4446:HG4_PB_SVrefine2Falcon1Dovetail_4364:HG4_Ill_scalpel_7015:HG4_Ill_manta_1815:HG4_Ill_SVrefine2DISCOVARDovetail_5354:HG4_Ill_GATKHCSBGrefine_5120:HG3_PB_pbsv_7000:HG3_PB_HySA_11080:HG3_Ill_scalpel_7282:HG3_Ill_manta_1725:HG3_Ill_SVrefine2DISCOVARDovetail_5499:HG3_Ill_GATKHCSBGrefine_4994:HG3_10X_allpass_1488:HG2_PB_SVrefine2PBcRplusDovetail_9711:HG2_PB_SVrefine2PB10Xhap12_5265:HG2_PB_SVrefine2Falcon1plusDovetail_10432:HG2_PB_HySA_13384:HG2_Ill_scalpel_7190:HG2_Ill_manta_2093:HG2_Ill_SVrefine2DISCOVARplusDovetail_11407:HG2_Ill_GATKHCSBGrefine_5040:HG2_10X_allpass_1227:HG2_10X_SVrefine210Xhap12_5167;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5167:HG2_10X_allpass_1227:HG2_Ill_GATKHCSBGrefine_5040:HG2_Ill_SVrefine2DISCOVARplusDovetail_11407:HG2_Ill_manta_2093:HG2_Ill_scalpel_7190:HG2_PB_HySA_13384:HG2_PB_SVrefine2Falcon1plusDovetail_10432:HG2_PB_SVrefine2PB10Xhap12_5265:HG2_PB_SVrefine2PBcRplusDovetail_9711:HG3_10X_allpass_1488:HG3_Ill_GATKHCSBGrefine_4994:HG3_Ill_SVrefine2DISCOVARDovetail_5499:HG3_Ill_manta_1725:HG3_Ill_scalpel_7282:HG3_PB_HySA_11080:HG3_PB_pbsv_7000:HG4_Ill_GATKHCSBGrefine_5120:HG4_Ill_SVrefine2DISCOVARDovetail_5354:HG4_Ill_manta_1815:HG4_Ill_scalpel_7015:HG4_PB_SVrefine2Falcon1Dovetail_4364;NumExactMatchSVs=22;ClusterMaxShiftDist=0.1056;ClusterMaxSizeDiff=0.1056;ClusterMaxEditDist=0.1056;PBcalls=14;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=70046;DistForward=64991;DistMin=64991;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=6:116750814-116751149;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:85:1/1:2:30:1:34:./.:0:0:0:0:1/1:0:37:./.:1:15:.:.:.
chr6	119417503	HG3_Ill_GATKHCSBGrefine_5005	CAGAAAGAAAGAAAAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1051:HG4_Ill_Krunchall_10800:HG3_Ill_Krunchall_10220:HG2_Ill_Krunchall_10483:HG2_PB_assemblyticsPBcR_22848:HG4_PB_assemblyticsfalcon_23000:HG2_PB_assemblyticsfalcon_23603:HG2_Ill_Spiral_528:HG2_PB_pbsv_7239:HG2_PB_HySA_13412:HG3_PB_assemblyticsfalcon_23467:HG4_Ill_MetaSV_4636:HG3_Ill_MetaSV_4629:HG2_Ill_tnscope_860:HG2_Ill_MetaSV_4448:HG4_PB_pbsv_7238:HG4_PB_SVrefine2PBcRDovetail_3558:HG4_PB_SVrefine2Falcon1Dovetail_4373:HG4_Ill_scalpel_7027:HG4_Ill_manta_1816:HG4_Ill_SVrefine2DISCOVARDovetail_5365:HG4_Ill_GATKHCSBGrefine_5126:HG4_10X_allpass_1439:HG3_PB_pbsv_7017:HG3_PB_HySA_11110:HG3_Ill_scalpel_7300:HG3_Ill_manta_1727:HG3_Ill_SVrefine2DISCOVARDovetail_5510:HG3_Ill_GATKHCSBGrefine_5005:HG3_10X_allpass_1490:HG2_PB_SVrefine2PBcRplusDovetail_9716:HG2_PB_SVrefine2PB10Xhap12_5271:HG2_PB_SVrefine2Falcon1plusDovetail_10438:HG2_Ill_scalpel_7207:HG2_Ill_manta_2095:HG2_Ill_SVrefine2DISCOVARplusDovetail_11417:HG2_Ill_GATKHCSBGrefine_5048:HG2_10X_allpass_1229:HG2_10X_SVrefine210Xhap12_5176;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5176:HG2_10X_allpass_1229:HG2_Ill_GATKHCSBGrefine_5048:HG2_Ill_SVrefine2DISCOVARplusDovetail_11417:HG2_Ill_manta_2095:HG2_Ill_scalpel_7207:HG2_PB_SVrefine2Falcon1plusDovetail_10438:HG2_PB_SVrefine2PB10Xhap12_5271:HG2_PB_SVrefine2PBcRplusDovetail_9716:HG3_10X_allpass_1490:HG3_Ill_GATKHCSBGrefine_5005:HG3_Ill_SVrefine2DISCOVARDovetail_5510:HG3_Ill_manta_1727:HG3_Ill_scalpel_7300:HG3_PB_HySA_11110:HG3_PB_pbsv_7017:HG4_10X_allpass_1439:HG4_Ill_GATKHCSBGrefine_5126:HG4_Ill_SVrefine2DISCOVARDovetail_5365:HG4_Ill_manta_1816:HG4_Ill_scalpel_7027:HG4_PB_SVrefine2Falcon1Dovetail_4373:HG4_PB_SVrefine2PBcRDovetail_3558:HG4_PB_pbsv_7238;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0962733;ClusterMaxSizeDiff=0.0962733;ClusterMaxEditDist=0.0962733;PBcalls=14;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=62312;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:119417504-119417847;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3491.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:1/1:0:21:2:23:./.:0:0:0:0:1/1:0:36:./.:2:15:.:.:.
chr6	121179099	HG4_Ill_scalpel_7038	AAAACAAAAGCACATGTAACCAACCTTAAACAAATAGAGATTTAGGAACTGCCTGACAAAGAATTTTTAAAATTATATAGAGAATCTCAGTAAGCACCAAGAAAACACAGAAGAACAATTAAACTAAATCAGGAAGACAGTACAC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_529:HG4_Ill_Krunchall_10814:HG2_Ill_Krunchall_10495:HG2_PB_pbsv_7246:HG4_PB_pbsv_7244:HG4_PB_assemblyticsfalcon_23015:HG4_PB_SVrefine2PBcRDovetail_3564:HG4_PB_SVrefine2Falcon1Dovetail_4378:HG4_Ill_svaba_9477:HG4_Ill_scalpel_7038:HG4_Ill_manta_1820:HG4_Ill_SVrefine2DISCOVARDovetail_5368:HG4_Ill_GATKHCSBGrefine_5133:HG4_Ill_250bpfermikitraw_10199:HG4_Ill_150bpfermikitraw_9791:HG4_10X_allpass_1440:HG3_PB_assemblyticsfalcon_23479:HG2_Ill_svaba_9393:HG2_Ill_scalpel_7216:HG2_Ill_manta_2097:HG2_Ill_SpiralSDKrefine_15071:HG2_Ill_MetaSV_4453:HG2_Ill_GATKHCSBGrefine_5054:HG2_10X_SVrefine210Xhap12_5184:HG4_Ill_Spiral_611:HG4_Ill_MetaSV_4641;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5184:HG2_Ill_GATKHCSBGrefine_5054:HG2_Ill_MetaSV_4453:HG2_Ill_SpiralSDKrefine_15071:HG2_Ill_manta_2097:HG2_Ill_scalpel_7216:HG2_Ill_svaba_9393:HG3_PB_assemblyticsfalcon_23479:HG4_10X_allpass_1440:HG4_Ill_150bpfermikitraw_9791:HG4_Ill_250bpfermikitraw_10199:HG4_Ill_GATKHCSBGrefine_5133:HG4_Ill_SVrefine2DISCOVARDovetail_5368:HG4_Ill_manta_1820:HG4_Ill_scalpel_7038:HG4_Ill_svaba_9477:HG4_PB_SVrefine2Falcon1Dovetail_4378:HG4_PB_SVrefine2PBcRDovetail_3564:HG4_PB_assemblyticsfalcon_23015:HG4_PB_pbsv_7244;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0137931;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0137931;PBcalls=6;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-144;DistBack=14731;DistForward=24695;DistMin=14731;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=6:121179100-121179251;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3492.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:34:0|1:41:4:0:29:./.:0:0:0:0:0/1:25:18:./.:.:.:.:.:.
chr6	121319292	HG2_PB_SVrefine2PB10Xhap12_5277	ACCTTTCCCATTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTACACAGGCGCCCGCTACCACGCCCGGCTAATGTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1052:HG4_PB_assemblyticsfalcon_23018:HG3_PB_assemblyticsfalcon_23481:HG2_PB_assemblyticsfalcon_23617:HG4_Ill_Krunchall_10820:HG2_Ill_Krunchall_10499:HG2_PB_assemblyticsPBcR_22862:HG4_PB_pbsv_7245:HG2_PB_HySA_13426:HG4_Ill_MetaSV_4642:HG3_Ill_MetaSV_4633:HG2_Ill_tnscope_861:HG2_Ill_MetaSV_4454:HG4_PB_SVrefine2PBcRDovetail_3565:HG4_PB_SVrefine2Falcon1Dovetail_4379:HG4_Ill_svaba_9481:HG4_Ill_scalpel_7042:HG4_Ill_manta_1821:HG4_Ill_SVrefine2DISCOVARDovetail_5369:HG4_Ill_GATKHCSBGrefine_5134:HG4_10X_allpass_1441:HG3_PB_pbsv_7025:HG3_Ill_svaba_9469:HG3_Ill_scalpel_7304:HG3_Ill_manta_1730:HG3_Ill_SVrefine2DISCOVARDovetail_5515:HG3_Ill_GATKHCSBGrefine_5011:HG3_10X_allpass_1491:HG2_PB_pbsv_7247:HG2_PB_SVrefine2PBcRplusDovetail_9722:HG2_PB_SVrefine2PB10Xhap12_5277:HG2_PB_SVrefine2Falcon1plusDovetail_10444:HG2_Ill_svaba_9397:HG2_Ill_scalpel_7219:HG2_Ill_manta_2098:HG2_Ill_SVrefine2DISCOVARplusDovetail_11424:HG2_Ill_GATKHCSBGrefine_5055:HG2_10X_allpass_1230:HG2_10X_SVrefine210Xhap12_5185;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5185:HG2_10X_allpass_1230:HG2_Ill_GATKHCSBGrefine_5055:HG2_Ill_SVrefine2DISCOVARplusDovetail_11424:HG2_Ill_manta_2098:HG2_Ill_scalpel_7219:HG2_Ill_svaba_9397:HG2_PB_SVrefine2Falcon1plusDovetail_10444:HG2_PB_SVrefine2PB10Xhap12_5277:HG2_PB_SVrefine2PBcRplusDovetail_9722:HG2_PB_pbsv_7247:HG3_10X_allpass_1491:HG3_Ill_GATKHCSBGrefine_5011:HG3_Ill_SVrefine2DISCOVARDovetail_5515:HG3_Ill_manta_1730:HG3_Ill_scalpel_7304:HG3_Ill_svaba_9469:HG3_PB_pbsv_7025:HG4_10X_allpass_1441:HG4_Ill_GATKHCSBGrefine_5134:HG4_Ill_SVrefine2DISCOVARDovetail_5369:HG4_Ill_manta_1821:HG4_Ill_scalpel_7042:HG4_Ill_svaba_9481:HG4_PB_SVrefine2Falcon1Dovetail_4379:HG4_PB_SVrefine2PBcRDovetail_3565;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0847724;ClusterMaxSizeDiff=0.0847724;ClusterMaxEditDist=0.0847724;PBcalls=13;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=76271;DistForward=50596;DistMin=50596;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:121319293-121319630;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3493.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:73:1/1:1:39:1:22:./.:0:0:0:0:1/1:0:48:./.:1:15:.:.:.
chr6	121797443	HG2_PB_SVrefine2PB10Xhap12_5279	GTGACCTGTGTGTTACAACTGAGTCTTTAATCTTGGAGCTTCATCAACTTAACTGGTTTGCTTTCATGACCCTCCCTCAGTCCTTTCTGCAGAGGTTCAAGAGGAAGACCTTTTGAGAAGTATGCAAGTTTTTTTTAATATATGTATGAAAACTTTATTCACTCTGTTAACTTTTTCATCATTCACAATGTTTATCTTTTTAAGAATAGTGGTAACTGGGCTGGGCACGGTGGCTCAAGCCTGTAATCTCAGCACTTTGGGAGGCCCAGGTGGGTGGATCAGGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAACCCCATCTCTACTAAAAAAATACAAAAATTAGCTGGGCACAGTGGTGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGTAGAATCGCTTGAACCCGGGAAGTGGAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGTCTGGGCAACACAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAATTAGTGGTAACTGGTTTTATTTTCTTTTTAGCCTTAAAGATTTTTTGGCTGGCAATGCGAATACATTCCTATACTTCTGCCCACTTAATTTGTTCT	G	20	PASS	ClusterIDs=HG2_10X_allpass_1231:HG2_Ill_Krunchall_10502:HG2_Ill_Krunchall_10501:HG3_PB_pbsv_7029:HG2_Ill_tnscope_862:HG3_Ill_manta_1731:HG3_Ill_SVrefine2DISCOVARDovetail_5517:HG3_Ill_MetaSV_4634:HG3_10X_allpass_1492:HG2_PB_pbsv_7251:HG2_PB_SVrefine2PBcRplusDovetail_9723:HG2_PB_SVrefine2PB10Xhap12_5279:HG2_PB_SVrefine2Falcon1plusDovetail_10447:HG2_Ill_breakscan11_1053:HG2_Ill_SVrefine2DISCOVARplusDovetail_11428:HG2_Ill_MetaSV_4455;NumClusterSVs=16;ExactMatchIDs=HG2_10X_allpass_1231:HG3_Ill_manta_1731:HG3_Ill_SVrefine2DISCOVARDovetail_5517:HG3_Ill_MetaSV_4634:HG3_10X_allpass_1492:HG2_PB_pbsv_7251:HG2_PB_SVrefine2PBcRplusDovetail_9723:HG2_PB_SVrefine2PB10Xhap12_5279:HG2_PB_SVrefine2Falcon1plusDovetail_10447:HG2_Ill_breakscan11_1053:HG2_Ill_SVrefine2DISCOVARplusDovetail_11428:HG2_Ill_MetaSV_4455;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00326797;ClusterMaxSizeDiff=0.00326797;ClusterMaxEditDist=0.00490196;PBcalls=5;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-611;DistBack=-134;DistForward=-476;DistMin=-476;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=6:121797444-121798056;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3494.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:36:0|1:33:0:1:32:./.:0:0:0:0:0/1:51:16:0/1:60:17:.:.:.
chr6	122301643	HG4_Ill_svaba_9486	GCAGTATGTCCATTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACACCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5188:HG4_Ill_Krunchall_10829:HG3_PB_pbsv_7033:HG4_PB_assemblyticsfalcon_23023:HG3_PB_assemblyticsfalcon_23486:HG2_PB_assemblyticsPBcR_22870:HG4_Ill_Krunchall_10828:HG3_Ill_Krunchall_10237:HG2_PB_pbsv_7254:HG2_Ill_Krunchall_10507:HG2_PB_HySA_13435:HG4_PB_HySA_10712:HG4_Ill_MetaSV_4643:HG3_Ill_MetaSV_4636:HG2_Ill_tnscope_863:HG2_Ill_MetaSV_4456:HG4_PB_pbsv_7250:HG4_PB_SVrefine2PBcRDovetail_3568:HG4_PB_SVrefine2Falcon1Dovetail_4383:HG4_Ill_svaba_9486:HG4_Ill_scalpel_7046:HG4_Ill_manta_1822:HG4_Ill_SVrefine2DISCOVARDovetail_5377:HG4_Ill_GATKHCSBGrefine_5137:HG4_10X_allpass_1442:HG3_PB_HySA_11134:HG3_Ill_svaba_9477:HG3_Ill_scalpel_7311:HG3_Ill_manta_1733:HG3_Ill_SVrefine2DISCOVARDovetail_5520:HG3_Ill_GATKHCSBGrefine_5015:HG3_10X_allpass_1493:HG2_PB_assemblyticsfalcon_23627:HG2_PB_SVrefine2PBcRplusDovetail_9725:HG2_PB_SVrefine2PB10Xhap12_5281:HG2_PB_SVrefine2Falcon1plusDovetail_10449:HG2_Ill_svaba_9402:HG2_Ill_scalpel_7224:HG2_Ill_manta_2099:HG2_Ill_breakscan11_1054:HG2_Ill_SpiralSDKrefine_15078:HG2_Ill_SVrefine2DISCOVARplusDovetail_11432:HG2_Ill_GATKHCSBGrefine_5058:HG2_10X_allpass_1232;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5188:HG4_PB_pbsv_7250:HG4_PB_SVrefine2PBcRDovetail_3568:HG4_PB_SVrefine2Falcon1Dovetail_4383:HG4_Ill_svaba_9486:HG4_Ill_scalpel_7046:HG4_Ill_manta_1822:HG4_Ill_SVrefine2DISCOVARDovetail_5377:HG4_Ill_GATKHCSBGrefine_5137:HG4_10X_allpass_1442:HG3_PB_HySA_11134:HG3_Ill_svaba_9477:HG3_Ill_scalpel_7311:HG3_Ill_manta_1733:HG3_Ill_SVrefine2DISCOVARDovetail_5520:HG3_Ill_GATKHCSBGrefine_5015:HG3_10X_allpass_1493:HG2_PB_assemblyticsfalcon_23627:HG2_PB_SVrefine2PBcRplusDovetail_9725:HG2_PB_SVrefine2PB10Xhap12_5281:HG2_PB_SVrefine2Falcon1plusDovetail_10449:HG2_Ill_svaba_9402:HG2_Ill_scalpel_7224:HG2_Ill_manta_2099:HG2_Ill_breakscan11_1054:HG2_Ill_SpiralSDKrefine_15078:HG2_Ill_SVrefine2DISCOVARplusDovetail_11432:HG2_Ill_GATKHCSBGrefine_5058:HG2_10X_allpass_1232;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0992;ClusterMaxSizeDiff=0.0992;ClusterMaxEditDist=0.0992;PBcalls=15;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=-88;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:122301644-122301978;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3495.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:1:10:0:18:./.:0:0:0:0:1/1:0:43:./.:1:15:.:.:.
chr6	122675954	HG2_Ill_Krunchall_10509	GGGAGGGGAGGGGAGAGAAGGGGAGGGGAGGGGAGAGAAGGGGAGGGGAGGGGAGA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_7036:HG2_PB_assemblyticsfalcon_23630:HG4_PB_assemblyticsfalcon_23027:HG4_PB_HySA_10713:HG4_PB_pbsv_7252:HG4_Ill_svaba_9489:HG4_Ill_scalpel_7048:HG4_Ill_manta_1824:HG4_Ill_Krunchall_10831:HG4_Ill_GATKHC_12188:HG4_Ill_GATKHCSBGrefine_5140:HG4_Ill_250bpfermikitraw_10214:HG4_Ill_150bpfermikitraw_9803:HG4_10X_allpass_1443:HG3_PB_assemblyticsfalcon_23491:HG3_Ill_svaba_9481:HG3_Ill_scalpel_7312:HG3_Ill_Krunchall_10241:HG3_Ill_GATKHC_12119:HG3_Ill_GATKHCSBGrefine_5029:HG3_Ill_250bpfermikitraw_9893:HG3_Ill_150bpfermikitraw_9640:HG3_10X_allpass_1495:HG2_PB_assemblyticsPBcR_22873:HG2_Ill_svaba_9405:HG2_Ill_scalpel_7226:HG2_Ill_manta_2101:HG2_Ill_SpiralSDKrefine_15080:HG2_Ill_Krunchall_10509:HG2_Ill_GATKHC_12149:HG2_Ill_GATKHCSBGrefine_5061:HG2_Ill_250bpfermikitraw_10206:HG2_Ill_150bpfermikitraw_9612:HG2_CG_vcfBeta_4320:HG2_PB_HySA_13438:HG2_PB_pbsv_7256;NumClusterSVs=36;ExactMatchIDs=HG2_CG_vcfBeta_4320:HG2_Ill_150bpfermikitraw_9612:HG2_Ill_250bpfermikitraw_10206:HG2_Ill_GATKHCSBGrefine_5061:HG2_Ill_GATKHC_12149:HG2_Ill_Krunchall_10509:HG2_Ill_SpiralSDKrefine_15080:HG2_Ill_manta_2101:HG2_Ill_scalpel_7226:HG2_Ill_svaba_9405:HG2_PB_assemblyticsPBcR_22873:HG3_10X_allpass_1495:HG3_Ill_150bpfermikitraw_9640:HG3_Ill_250bpfermikitraw_9893:HG3_Ill_GATKHCSBGrefine_5029:HG3_Ill_GATKHC_12119:HG3_Ill_Krunchall_10241:HG3_Ill_scalpel_7312:HG3_Ill_svaba_9481:HG3_PB_assemblyticsfalcon_23491:HG4_10X_allpass_1443:HG4_Ill_150bpfermikitraw_9803:HG4_Ill_250bpfermikitraw_10214:HG4_Ill_GATKHCSBGrefine_5140:HG4_Ill_GATKHC_12188:HG4_Ill_Krunchall_10831:HG4_Ill_manta_1824:HG4_Ill_scalpel_7048:HG4_Ill_svaba_9489:HG4_PB_pbsv_7252;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.192982;PBcalls=9;Illcalls=24;TenXcalls=2;CGcalls=1;PBexactcalls=3;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=1;HG2count=14;HG3count=10;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-55;DistBack=73597;DistForward=20707;DistMin=20707;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=22;REFWIDENED=6:122675951-122676027;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3496.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:37:1/1:2:17:2:15:./.:0:0:0:0:1/1:0:51:./.:.:.:.:.:.
chr6	123136580	HG4_Ill_GATKHCSBGrefine_5142	ATATATAAATAGATATCATATATTATATATTATATAAATATATCTTATATTACATAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5192:HG2_PB_HySA_13442:HG2_PB_assemblyticsfalcon_23633:HG3_PB_assemblyticsfalcon_23493:HG3_PB_pbsv_7038:HG4_PB_pbsv_7254:HG2_PB_pbsv_7258:HG4_PB_HySA_10717:HG4_PB_assemblyticsfalcon_23029:HG4_Ill_svaba_9491:HG4_Ill_scalpel_7052:HG4_Ill_GATKHCSBGrefine_5142:HG4_Ill_250bpfermikitraw_10217:HG4_Ill_150bpfermikitraw_9806:HG3_PB_HySA_11139:HG3_Ill_svaba_9483:HG3_Ill_scalpel_7315:HG3_Ill_GATKHCSBGrefine_5031:HG3_Ill_250bpfermikitraw_9895:HG3_Ill_150bpfermikitraw_9641:HG2_Ill_svaba_9407:HG2_Ill_scalpel_7229:HG2_Ill_manta_2102:HG2_Ill_SpiralSDKrefine_15083:HG2_Ill_GATKHCSBGrefine_5063:HG2_Ill_250bpfermikitraw_10209:HG2_Ill_150bpfermikitraw_9615:HG4_PB_SVrefine2PBcRDovetail_3571:HG4_Ill_SVrefine2DISCOVARDovetail_5380:HG3_Ill_SVrefine2DISCOVARDovetail_5524:HG2_PB_SVrefine2PBcRplusDovetail_9727:HG2_Ill_SVrefine2DISCOVARplusDovetail_11435;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9615:HG2_Ill_250bpfermikitraw_10209:HG2_Ill_GATKHCSBGrefine_5063:HG2_Ill_SpiralSDKrefine_15083:HG2_Ill_manta_2102:HG2_Ill_scalpel_7229:HG2_Ill_svaba_9407:HG3_Ill_150bpfermikitraw_9641:HG3_Ill_250bpfermikitraw_9895:HG3_Ill_GATKHCSBGrefine_5031:HG3_Ill_scalpel_7315:HG3_Ill_svaba_9483:HG3_PB_HySA_11139:HG4_Ill_150bpfermikitraw_9806:HG4_Ill_250bpfermikitraw_10217:HG4_Ill_GATKHCSBGrefine_5142:HG4_Ill_scalpel_7052:HG4_Ill_svaba_9491:HG4_PB_assemblyticsfalcon_23029;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0884956;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.300885;PBcalls=11;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-56;DistBack=4933;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=120;REFWIDENED=6:123136544-123136719;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3497.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:52:1/1:1:28:2:15:./.:0:0:0:0:1/1:0:20:./.:.:.:.:.:.
chr6	123515058	HG4_PB_SVrefine2Falcon1Dovetail_4388	TAAAAAACATCAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10453:HG2_PB_pbsv_7260:HG4_PB_assemblyticsfalcon_23034:HG3_PB_assemblyticsfalcon_23496:HG3_PB_HySA_11141:HG4_Ill_Krunchall_10841:HG3_Ill_Krunchall_10247:HG2_Ill_Krunchall_10517:HG3_PB_pbsv_7040:HG4_PB_HySA_10720:HG4_Ill_MetaSV_4646:HG2_Ill_tnscope_864:HG2_Ill_MetaSV_4459:HG4_PB_pbsv_7256:HG4_PB_SVrefine2PBcRDovetail_3572:HG4_PB_SVrefine2Falcon1Dovetail_4388:HG4_Ill_SVrefine2DISCOVARDovetail_5381:HG4_Ill_GATKHCSBGrefine_5143:HG4_10X_allpass_1444:HG3_Ill_scalpel_7319:HG3_Ill_manta_1735:HG3_Ill_SVrefine2DISCOVARDovetail_5525:HG3_Ill_MetaSV_4640:HG3_Ill_GATKHCSBGrefine_5032:HG3_10X_allpass_1496:HG2_Ill_GATKHCSBGrefine_5064:HG2_10X_allpass_1233:HG2_10X_SVrefine210Xhap12_5193:HG2_PB_SVrefine2PB10Xhap12_5287:HG2_Ill_breakscan11_1055:HG3_Ill_Spiral_7997:HG2_PB_assemblyticsfalcon_23638;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5193:HG2_10X_allpass_1233:HG2_Ill_GATKHCSBGrefine_5064:HG3_10X_allpass_1496:HG3_Ill_GATKHCSBGrefine_5032:HG3_Ill_MetaSV_4640:HG3_Ill_SVrefine2DISCOVARDovetail_5525:HG3_Ill_manta_1735:HG3_Ill_scalpel_7319:HG4_10X_allpass_1444:HG4_Ill_GATKHCSBGrefine_5143:HG4_Ill_SVrefine2DISCOVARDovetail_5381:HG4_PB_SVrefine2Falcon1Dovetail_4388:HG4_PB_SVrefine2PBcRDovetail_3572:HG4_PB_pbsv_7256;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.0806452;PBcalls=12;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=-195;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:123515059-123515385;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3498.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:0|1:21:5:1:19:./.:0:0:0:0:0/1:29:19:0/1:33:6:.:.:.
chr6	123549075	HG3_Ill_250bpfermikitraw_9901	GAACATAATCCAAATCTCCTATATCAGGGCCTCTTGAAAGAGTGTTGAAATTTATCCCATGAATAGTACACCTGCTATGTGCCAGCCACTGTTCTA	G	20	PASS	ClusterIDs=HG2_10X_allpass_1234:HG2_Ill_Spiral_530:HG3_PB_pbsv_7041:HG2_PB_pbsv_7261:HG3_Ill_GATKHCSBGrefine_5033:HG3_Ill_250bpfermikitraw_9901:HG2_PB_SVrefine2PBcRplusDovetail_9730:HG2_PB_SVrefine2PB10Xhap12_5288:HG2_Ill_SVrefine2DISCOVARplusDovetail_11438:HG2_Ill_GATKHCSBGrefine_5065:HG2_Ill_250bpfermikitraw_10216;NumClusterSVs=11;ExactMatchIDs=HG2_10X_allpass_1234:HG3_Ill_GATKHCSBGrefine_5033:HG3_Ill_250bpfermikitraw_9901:HG2_PB_SVrefine2PBcRplusDovetail_9730:HG2_PB_SVrefine2PB10Xhap12_5288:HG2_Ill_SVrefine2DISCOVARplusDovetail_11438:HG2_Ill_GATKHCSBGrefine_5065:HG2_Ill_250bpfermikitraw_10216;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0208333;ClusterMaxSizeDiff=0.0208333;ClusterMaxEditDist=0.0210526;PBcalls=4;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-95;DistBack=20025;DistForward=-84;DistMin=-84;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=96;REFWIDENED=6:123549076-123549266;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3499.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:45:0|1:40:3:3:41:./.:0:0:0:0:0/1:31:26:./.:.:.:.:.:.
chr6	124498906	HG3_Ill_svaba_9501	TTCTGTTCATCCATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4460:HG4_PB_assemblyticsfalcon_23046:HG3_PB_assemblyticsfalcon_23511:HG2_PB_assemblyticsfalcon_23650:HG2_PB_assemblyticsPBcR_22897:HG4_Ill_Krunchall_10854:HG3_Ill_Krunchall_10265:HG4_PB_pbsv_7259:HG3_PB_pbsv_7046:HG2_PB_pbsv_7264:HG3_PB_HySA_11157:HG2_PB_HySA_13456:HG4_PB_HySA_10730:HG4_PB_SVrefine2PBcRDovetail_3573:HG4_PB_SVrefine2Falcon1Dovetail_4391:HG4_Ill_svaba_9505:HG4_Ill_scalpel_7067:HG4_Ill_manta_1825:HG4_Ill_SVrefine2DISCOVARDovetail_5383:HG4_Ill_GATKHCSBGrefine_5148:HG4_10X_allpass_1445:HG3_Ill_svaba_9501:HG3_Ill_scalpel_7331:HG3_Ill_manta_1737:HG3_Ill_SVrefine2DISCOVARDovetail_5529:HG3_Ill_GATKHCSBGrefine_5039:HG3_10X_allpass_1497:HG2_PB_SVrefine2PBcRplusDovetail_9733:HG2_PB_SVrefine2PB10Xhap12_5290:HG2_PB_SVrefine2Falcon1plusDovetail_10456:HG2_Ill_svaba_9422:HG2_Ill_scalpel_7239:HG2_Ill_manta_2105:HG2_Ill_SVrefine2DISCOVARplusDovetail_11443:HG2_Ill_GATKHCSBGrefine_5070:HG2_10X_allpass_1235:HG2_10X_SVrefine210Xhap12_5197:HG2_Ill_breakscan11_1056:HG4_Ill_MetaSV_4647:HG3_Ill_MetaSV_4642:HG2_Ill_tnscope_865;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5197:HG2_10X_allpass_1235:HG2_Ill_GATKHCSBGrefine_5070:HG2_Ill_SVrefine2DISCOVARplusDovetail_11443:HG2_Ill_manta_2105:HG2_Ill_scalpel_7239:HG2_Ill_svaba_9422:HG2_PB_SVrefine2Falcon1plusDovetail_10456:HG2_PB_SVrefine2PB10Xhap12_5290:HG2_PB_SVrefine2PBcRplusDovetail_9733:HG3_10X_allpass_1497:HG3_Ill_GATKHCSBGrefine_5039:HG3_Ill_SVrefine2DISCOVARDovetail_5529:HG3_Ill_manta_1737:HG3_Ill_scalpel_7331:HG3_Ill_svaba_9501:HG4_10X_allpass_1445:HG4_Ill_GATKHCSBGrefine_5148:HG4_Ill_SVrefine2DISCOVARDovetail_5383:HG4_Ill_manta_1825:HG4_Ill_scalpel_7067:HG4_Ill_svaba_9505:HG4_PB_SVrefine2Falcon1Dovetail_4391:HG4_PB_SVrefine2PBcRDovetail_3573;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0979463;ClusterMaxSizeDiff=0.0979463;ClusterMaxEditDist=0.0979463;PBcalls=15;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=18656;DistForward=65966;DistMin=18656;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:124498907-124499245;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3500.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:2:16:0:18:./.:0:0:0:0:1/1:0:31:0/1:2:7:.:.:.
chr6	126182911	HG4_Ill_SVrefine2DISCOVARDovetail_5390	GGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCGGAGGTGAGTGGATCACCTGAGTTCAGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCACATGCCTGTAATTCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATTCCACCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGTGATAAGATGACAGGTAGGGGAGACGTGAATGAAGAGTCTGAGGATCAAAGGTGTTCTTGGTGAAGAGGATAGAACCACGGGAGTAAAAACAGTCATCAAAGCTGGAATCAGATAAGAAGATGCTTTCATGAGCTAAAACTCATGCCTAAGTGGAGAAATAAGAGCTTACCTTAGTTAGGCAGAATTATGGGGAATACTCAGTCCTCCGAATAACTGTAGCAAATGTTTACAGGTCATGAATAAATGATAAAGAGATGATCTTTTTAAAACATTATCTACAAAGGAGCAAAGAAAAAAGAAACAGACTTCTTCATAGTGGTGAATGCCAGAGGAATTAAAATCTCTTCAGACTTATGAGGCAAAAGCTGTTTTTCAAGGTCAAAGACAAGACATTCTCAGACATAGAAGAACTCAAGAAAGAGACCTTTTGTGTTGTAGATTACCTTAAACAAATTTATGAACAAATTAGGTCATTTTGGCAGTGCCCACGTGAATGGCATTTTTGCCACTGTGGGCTTCAGTGGACTGTTGCTGCTTTTTTTCTCTCTCTTTTTTCTGTTTTCTACATCATCACTTTTGAAAATGTTTGATAACATTTTCAACATTATTGACTTTTCCATTCACACTGTTGGCAAAAACTACTTTACCTGTGGCTAGGTGTGGTGGTTCATGCCTATAATCACAGCACTTTGGGGGGCCAAGGCAGGCAGATCACCTGATCAAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAACATACAAAAAAATTAGCTGGACATGTGGTGCATGCCTGTAGTCCCAGCTACTGGGGAGGCTGAAGCAAGAGAACCGCTTGAACCCAGGATGCAGAGGTTGCAGTGAGTCAAGATTGTGCCACTGCATACCAACCTGGGTGACAGAGTGAGACTTCGTCTCAAAAAAACAAAAAAACAAACAAAAAACCCTACTTTACTTAAAAACTAAAAATATTAAAAATATGGTAAACTGTGTTCTGTAGAAAATTGTTCCAAAAGGGAAAAGGAATTTAGAATCTAGAAATCAGTTATATTTCCTTAGAAACTCCAGTAGTTAGGGAGCATGAATGTTCACAGTTAAGTAGCTGTAAAACAAACACCCCTGAGTACACCTGTGATTGCACCAGCTTTGTTTCAAGGGACACTCCTTTCCTGACCTCTCACAGCCCCAGCACTCTAATTAACACAATATTTTGTAACCCATTCTTGTCATTGTTGAAACAAAAAGGTACAGTCACTATACAAAAGCAACTGTATCTTAACAAGCCTGTTGTACTGTGTGTGAGCTTGAACTCAGAGTTTAGTTCCATTATAATCATAGTAGTCTGCATAATGCAAATCTCATACCCTACTTAATCTGTCTTGTTATATTCACTTGCATTATAAAAAATCTCATTGTAAGAGAAATGCCCAAATGTGGTTTGGGCTGAGGGAAAGATAACAAATAAACTAAGTACAGTCAGGGGTTTTAAGCTTTGAAAAATTAAATTAGAAGTAAACTAGGAAGGATAAAAGAGGAAAAATACTCTAATTCTGTCTTCGGCCTGCTCGATCCACAAAATACCATATAACTGAGTGGCTTATAAATAACAGAAATGTATTTCTCACAGTTCTGGAGGCTGGAAAGTCCAAGATTAAGGCACTGGCAAATGTGGAGTGTGTTGAGAGCCCATATCCTCATAGACCACCATCCTCTCACTCTGAGCTCACATGGTAGAAGGGTGAGGGGTCTTTGGCCTCTTTTATAAGGGCAATAATCCCATCCATGAGAGTACTGCCAAGATGACCTAACCACCCCTCAATGGCTCCTTTTCCTAATACCACACACTTGTGGGTGAGGATTTCAACATATGAATTTTGGGGGAACATAACATTAAAATCTTAGCAAATACATTGATGGTTGAAGAGTGATGTGGTCAGGTTTTTTTGGGGGGGGCAGTTTGGCTGTTTTTATCAAGACCCTTTTTGCATACTCTTTGACCCAACAATTCTGTTTTTAGAAATTCATCCTAAGCAAACAGTCATGAGCATATTAGAAGATTTAACTGCAGTAACTATCATTGCATTGTTTAAAGTAGCAGGAATATGAAAAATAACATAAATGATATAAAATGGAATACTATGTGCCATTTTAAAATGAAGTAGAAAAATAGTTAATGATATGGGAAATTTTCACCAAATACTACAGTAAAAAAGTCGGTTGACAATAGTTACTGATTATGATTCCATTTTTGTTTAAAAAAATAATTCACCTACATGCATATAAAAAGAGGTATAGAGAATTTCTAGAAGTGTATTCACCAGAATGCAAACATCAGTCTCTCTGATTGGAGGGAAAATGGATGACCTTTATTTTTTTTTTAAATTTATTTGTGTTTTAAAATCACTACTATGATCTGAATATTTGTGTCCCCCCACCCACCCCCAAATTTACATGTTGAAATCCTACTTCCCAACGTGATAGTATCAGGAGGTGGGACCTTTAGGAAGTAATGAGGCCATATGGGTGGCGACCTCATGATTGGGATTAGTGTTCTTAGCAAAGAGACTTCAGAGAGCTGCCTGGTTGAGAATGCGCTATCTACGAGCCAGGATGAGGGAAAAATACGCCGAGTTTGCCAGTGTCTTGATCTCGGACTTCCTAGTGTCCAGAACTCTGGGAGATAAATTACTGTTGTTTCTAAGCCACCAGTTTATGGTATTTTGTTATAGCAGCCTGAATATACTAAGACAATGGCTGTATATAGTTTTGATTCACGTGAAATTGGCTTTCATATTTCTTCTGTTTTCTTCTGAAGTGTTCATATGCACAATTATTGTCCTTGATCCATTTATGAAAAGAAAAAGCTGTTTTCAATAAAGTATTTTGGAGGGTGGGAAAGAGGGTAAGAAGAGGAGGAGAAGCAACATCAGACACGAGGAAGAGCAGAAAGAACTATTTTCCATGAATGTCTCCTTTGTGTTAGATCCTTTATTTCACTATTTAATTTAGGACTTATGATCTGCTACAAAAAATGTAGCCTATTTTACAAACGTAAAAACTGAGAAGCTGAGTAACTGGCCAGGGATCCACTGTTGGCTAGCATGCAGCCAGGATTCATACCCTGCCCTCTTTGGCACCAAAGCCTGACTTATTTCCACAAACGAGGAGGACCTTCTCCATGCTGAGTGCAGTAGTAGATTCTAGAGCAAAACGTTTTATAAGATTGGTAACTTCCCTGTGCTTTAAGCCTTGCATTTTAGATTTTAGCACAGTATGACTCATTTTAGTCGAGAACTATGTTACCTGTGACTTGCTTGAAGGAAGGAAGGTAGGTAACATGTACTGCATGACATTTTCCTTTGTGCCACAGGTTAAAACAGAGTTCATATTGAGTATAGGGTTCATTCTTCCCTGACACATCTTTTTTTTTTTAATTTAATTATAACAGCTTATACTTTAGGTTTCTCTTAAAGTGCTACCTAACAATACTGAATGTTTTAATTGTGCTTTTTATAGAGTCAGGTCAATAATTTGAGATGTGTGCATCGCCAATAGAGAAGGTGTTATTTCTTTTTAAAGTTTATTTATTTTATGTTTTTTAAAGACAGGGTCTCTCTCTCTCTGTTGTCCAGGCTGGAGTGTAGTAGTGCAATCATAGCTCACTGTAGCCTTAAACTCCTGGGCTCAAGTGATGCTCCCACCTCAGCCTCCCAAGTAGCGGGGACTATAGGCATGTAGCACCACGCCTGGCTAATTTTTATATTTTCTTTCTTTCTTTCTTTCTTTTCTTTTGTAGACACAGGGTCTGCCCATCTTACTCAGGCATGTCTTGAACTCCTGTCCTCAAGCAGTCCTCCCACCTCAGCCTTCCAGTGTTCTGGGATTACAGGTGTGAGCCACTGCATCTGGCCAAGAAGACATTCTTTAGGCAGATATAAGTGCTATATTTTCTTCAAAGACATATAACTTTAGGCCGGGCACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5202:HG2_PB_assemblyticsPBcR_22912:HG2_PB_pbsv_7274:HG4_PB_pbsv_7272:HG4_10X_allpass_1447:HG2_10X_allpass_1237:HG2_PB_HySA_13479:HG4_Ill_MetaSV_4650:HG4_PB_pbsv_7271:HG4_PB_SVrefine2PBcRDovetail_3581:HG4_PB_SVrefine2Falcon1Dovetail_4399:HG4_Ill_SVrefine2DISCOVARDovetail_5390:HG2_PB_SVrefine2PBcRplusDovetail_9739:HG2_PB_SVrefine2PB10Xhap12_5297:HG2_PB_SVrefine2Falcon1plusDovetail_10463:HG2_Ill_SVrefine2DISCOVARplusDovetail_11453;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5202:HG4_PB_SVrefine2PBcRDovetail_3581:HG4_PB_SVrefine2Falcon1Dovetail_4399:HG4_Ill_SVrefine2DISCOVARDovetail_5390:HG2_PB_SVrefine2PBcRplusDovetail_9739:HG2_PB_SVrefine2PB10Xhap12_5297:HG2_PB_SVrefine2Falcon1plusDovetail_10463:HG2_Ill_SVrefine2DISCOVARplusDovetail_11453;NumExactMatchSVs=8;ClusterMaxShiftDist=0.140051;ClusterMaxSizeDiff=0.140051;ClusterMaxEditDist=0.140051;PBcalls=10;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-4293;DistBack=20914;DistForward=-4160;DistMin=-4160;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=290;REFWIDENED=6:126182912-126187494;PctSeqSimilarity=0.9476;PctSizeSimilarity=0.9998;PctRecOverlap=0.969;SizeDiff=1;StartDistance=-133;EndDistance=-132;GTMatch=0;TruScore=97;MatchId=3501.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:41:59:0|1:25:0:0:25:./.:0:0:0:0:./.:54:4:0/1:367:194:4234:.:.
chr6	126468007	HG4_Ill_MetaSV_4652	CTACTGATATTACTAAATTATTTATATTGTTTCTACTAAAAGTGATTATTAGACATAATGTCAAGATGCTCATATTCTGCTTAGGGGTTAAAATACTTAGGCATTAATTACCTAGAGGATACTGAAGTGCTAAACTCTATGGTGATGGTCATATTTTCAATTGTAGGCTCTCAGGTTAAGGAAAGATTTAAGCAGTTCAGCAAGTGGGGATAAGATGACCTTCCTGAAGAGGTGAGGA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_7275:HG4_PB_pbsv_7276:HG4_Ill_Cortex_3255:HG3_Ill_Cortex_3274:HG2_Ill_Cortex_7959:HG4_PB_HySA_10743:HG3_PB_HySA_11166:HG2_Ill_tnscope_866:HG4_PB_assemblyticsfalcon_23059:HG4_PB_SVrefine2PBcRDovetail_3583:HG4_PB_SVrefine2Falcon1Dovetail_4400:HG4_Ill_svaba_9516:HG4_Ill_scalpel_7079:HG4_Ill_manta_1827:HG4_Ill_SVrefine2DISCOVARDovetail_5391:HG4_Ill_MetaSV_4652:HG4_Ill_GATKHCSBGrefine_5159:HG4_10X_allpass_1448:HG3_Ill_svaba_9509:HG3_Ill_scalpel_7342:HG3_Ill_SVrefine2DISCOVARDovetail_5537:HG3_Ill_MetaSV_4645:HG3_Ill_GATKHCSBGrefine_5049:HG3_10X_allpass_1500:HG2_PB_SVrefine2PBcRplusDovetail_9740:HG2_PB_SVrefine2PB10Xhap12_5298:HG2_PB_SVrefine2Falcon1plusDovetail_10464:HG2_PB_HySA_13480:HG2_Ill_svaba_9431:HG2_Ill_scalpel_7248:HG2_Ill_manta_2109:HG2_Ill_SpiralSDKrefine_15101:HG2_Ill_SVrefine2DISCOVARplusDovetail_11455:HG2_Ill_MetaSV_4465:HG2_Ill_GATKHCSBGrefine_5078:HG2_10X_SVrefine210Xhap12_5203:HG4_Ill_Krunchall_10868:HG3_Ill_Krunchall_10276:HG2_Ill_Krunchall_10541:HG3_PB_pbsv_7053:HG3_PB_assemblyticsfalcon_23525:HG2_PB_assemblyticsfalcon_23667:HG2_PB_assemblyticsPBcR_22913;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5203:HG2_Ill_GATKHCSBGrefine_5078:HG2_Ill_MetaSV_4465:HG2_Ill_SVrefine2DISCOVARplusDovetail_11455:HG2_Ill_SpiralSDKrefine_15101:HG2_Ill_manta_2109:HG2_Ill_scalpel_7248:HG2_Ill_svaba_9431:HG2_PB_HySA_13480:HG2_PB_SVrefine2Falcon1plusDovetail_10464:HG2_PB_SVrefine2PB10Xhap12_5298:HG2_PB_SVrefine2PBcRplusDovetail_9740:HG3_10X_allpass_1500:HG3_Ill_GATKHCSBGrefine_5049:HG3_Ill_MetaSV_4645:HG3_Ill_SVrefine2DISCOVARDovetail_5537:HG3_Ill_scalpel_7342:HG3_Ill_svaba_9509:HG4_10X_allpass_1448:HG4_Ill_GATKHCSBGrefine_5159:HG4_Ill_MetaSV_4652:HG4_Ill_SVrefine2DISCOVARDovetail_5391:HG4_Ill_manta_1827:HG4_Ill_scalpel_7079:HG4_Ill_svaba_9516:HG4_PB_SVrefine2Falcon1Dovetail_4400:HG4_PB_SVrefine2PBcRDovetail_3583:HG4_PB_assemblyticsfalcon_23059;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0126316;ClusterMaxSizeDiff=0.0126316;ClusterMaxEditDist=0.021097;PBcalls=15;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=18;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-237;DistBack=44335;DistForward=4806;DistMin=4806;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:126468008-126468245;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3502.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:84:./.:0:1:0:9:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr6	128976347	HG2_Ill_breakscan11_1057	ATTAAGCTTAACTATCCTAACTTAACTTAACTATCCTAACTTAACTTAACTATCCTAAATATTTAGGCAGCCAACATTGGGCCACATAAAACAAATTCTTAGAGACCTATAAAGAGACTTAGATAACCACACAATAATTGTGGGAGACTTAACACCTTACTGACAGTGTTAGACACATCATTAAGGCAGAAAACTAACATAGATATCTGGGACCTATT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_7279:HG4_PB_assemblyticsfalcon_23070:HG4_PB_SVrefine2Falcon1Dovetail_4404:HG4_PB_SVrefine2PBcRDovetail_3586:HG4_Ill_svaba_9521:HG4_Ill_scalpel_7083:HG4_Ill_manta_1828:HG4_Ill_MetaSV_4653:HG4_Ill_GATKHCSBGrefine_5161:HG4_10X_allpass_1449:HG3_PB_SVrefine2Falcon1Dovetail_4370:HG2_PB_pbsv_7279:HG2_PB_SVrefine2PB10Xhap12_5302:HG2_PB_SVrefine2Falcon1plusDovetail_10468:HG2_Ill_svaba_9436:HG2_Ill_scalpel_7257:HG2_Ill_manta_2111:HG2_Ill_breakscan11_1057:HG2_Ill_MetaSV_4467:HG2_Ill_GATKHCSBGrefine_5081:HG2_10X_allpass_1238:HG2_10X_SVrefine210Xhap12_5213:HG3_PB_assemblyticsfalcon_23533:HG2_PB_assemblyticsfalcon_23677:HG4_Ill_Krunchall_10877:HG2_Ill_Krunchall_10552;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5213:HG2_10X_allpass_1238:HG2_Ill_GATKHCSBGrefine_5081:HG2_Ill_MetaSV_4467:HG2_Ill_breakscan11_1057:HG2_Ill_manta_2111:HG2_Ill_scalpel_7257:HG2_Ill_svaba_9436:HG2_PB_SVrefine2Falcon1plusDovetail_10468:HG2_PB_SVrefine2PB10Xhap12_5302:HG2_PB_pbsv_7279:HG3_PB_SVrefine2Falcon1Dovetail_4370:HG4_10X_allpass_1449:HG4_Ill_GATKHCSBGrefine_5161:HG4_Ill_MetaSV_4653:HG4_Ill_manta_1828:HG4_Ill_scalpel_7083:HG4_Ill_svaba_9521:HG4_PB_SVrefine2PBcRDovetail_3586;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00917431;ClusterMaxSizeDiff=0.00917431;ClusterMaxEditDist=0.0183486;PBcalls=10;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-217;DistBack=-50;DistForward=-217;DistMin=-217;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:128976348-128976564;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3503.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:45:0|1:46:4:2:40:./.:0:0:0:0:0/1:61:24:./.:.:.:.:.:.
chr6	128989816	HG4_10X_allpass_1450	TAAGAAACACTACATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCATGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5303:HG4_Ill_Krunchall_10878:HG2_Ill_Krunchall_10553:HG4_PB_assemblyticsfalcon_23071:HG2_PB_pbsv_7280:HG4_PB_pbsv_7280:HG4_PB_HySA_10754:HG4_Ill_MetaSV_4654:HG2_Ill_tnscope_867:HG2_Ill_MetaSV_4468:HG4_PB_SVrefine2PBcRDovetail_3587:HG4_PB_SVrefine2Falcon1Dovetail_4405:HG4_Ill_manta_1829:HG4_Ill_SVrefine2DISCOVARDovetail_5403:HG4_Ill_GATKHCSBGrefine_5162:HG4_10X_allpass_1450:HG3_PB_SVrefine2Falcon1Dovetail_4371:HG2_Ill_manta_2112:HG2_Ill_SpiralSDKrefine_15108:HG2_Ill_GATKHCSBGrefine_5082:HG2_10X_allpass_1239:HG2_10X_SVrefine210Xhap12_5214:HG2_Ill_breakscan11_1058:HG2_Ill_Spiral_532;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5214:HG2_10X_allpass_1239:HG2_Ill_GATKHCSBGrefine_5082:HG2_Ill_SpiralSDKrefine_15108:HG2_Ill_manta_2112:HG3_PB_SVrefine2Falcon1Dovetail_4371:HG4_10X_allpass_1450:HG4_Ill_GATKHCSBGrefine_5162:HG4_Ill_SVrefine2DISCOVARDovetail_5403:HG4_Ill_manta_1829:HG4_PB_SVrefine2Falcon1Dovetail_4405:HG4_PB_SVrefine2PBcRDovetail_3587;NumExactMatchSVs=12;ClusterMaxShiftDist=0.20029;ClusterMaxSizeDiff=0.20029;ClusterMaxEditDist=0.20029;PBcalls=8;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-334;DistBack=13236;DistForward=52260;DistMin=13236;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7486;REFWIDENED=6:128982346-128999906;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3504.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:25:0|1:35:0:1:23:./.:0:0:0:0:0/1:23:28:0/1:30:6:.:.:.
chr6	129319515	HG3_Ill_MetaSV_4647	CAGAAGTATGATGACAGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGCTCTACAGCTCCCAGTGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGTACGCAGCTGGAGATCTGAGAATGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGAAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATCATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAAACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGACAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAACATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAATAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCTGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAATAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1059:HG4_PB_assemblyticsfalcon_23074:HG3_10X_allpass_1501:HG3_Ill_Krunchall_10289:HG3_PB_assemblyticsfalcon_23535:HG2_PB_assemblyticsfalcon_23679:HG2_PB_assemblyticsPBcR_22924:HG4_10X_allpass_1451:HG2_10X_allpass_1240:HG2_PB_HySA_13487:HG4_PB_HySA_10757:HG2_Ill_tnscope_868:HG4_PB_pbsv_7281:HG4_PB_SVrefine2PBcRDovetail_3588:HG4_PB_SVrefine2Falcon1Dovetail_4406:HG4_Ill_SVrefine2DISCOVARDovetail_5405:HG4_Ill_MetaSV_4655:HG4_Ill_GATKHCSBGrefine_5163:HG3_PB_pbsv_7059:HG3_Ill_SVrefine2DISCOVARDovetail_5558:HG3_Ill_MetaSV_4647:HG3_Ill_GATKHCSBGrefine_5052:HG2_PB_pbsv_7281:HG2_PB_SVrefine2PBcRplusDovetail_9746:HG2_PB_SVrefine2PB10Xhap12_5304:HG2_PB_SVrefine2Falcon1plusDovetail_10469:HG2_Ill_SVrefine2DISCOVARplusDovetail_11476:HG2_Ill_MetaSV_4469:HG2_Ill_GATKHCSBGrefine_5083:HG2_10X_SVrefine210Xhap12_5215;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5215:HG2_Ill_GATKHCSBGrefine_5083:HG2_Ill_MetaSV_4469:HG2_Ill_SVrefine2DISCOVARplusDovetail_11476:HG2_PB_SVrefine2Falcon1plusDovetail_10469:HG2_PB_SVrefine2PB10Xhap12_5304:HG2_PB_SVrefine2PBcRplusDovetail_9746:HG2_PB_pbsv_7281:HG3_Ill_GATKHCSBGrefine_5052:HG3_Ill_MetaSV_4647:HG3_Ill_SVrefine2DISCOVARDovetail_5558:HG3_PB_pbsv_7059:HG4_Ill_GATKHCSBGrefine_5163:HG4_Ill_MetaSV_4655:HG4_Ill_SVrefine2DISCOVARDovetail_5405:HG4_PB_SVrefine2Falcon1Dovetail_4406:HG4_PB_SVrefine2PBcRDovetail_3588:HG4_PB_pbsv_7281;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0047918;ClusterMaxSizeDiff=0.0047918;ClusterMaxEditDist=0.0047918;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-6059;DistBack=37015;DistForward=44010;DistMin=37015;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:129319516-129325589;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3505.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:112:./.:0:1:0:1:./.:0:0:0:0:1/1:0:33:1/1:1:391:6395:.:.
chr6	129737070	HG2_Ill_SVrefine2DISCOVARplusDovetail_11479	TGAAATTATACACTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1060:HG2_PB_SVrefine2PBcRplusDovetail_9749:HG2_PB_assemblyticsPBcR_22933:HG2_PB_assemblyticsfalcon_23685:HG4_Ill_Krunchall_10888:HG2_PB_pbsv_7286:HG4_PB_pbsv_7286:HG4_PB_HySA_10763:HG4_Ill_MetaSV_4658:HG2_Ill_tnscope_869:HG2_Ill_MetaSV_4470:HG4_PB_assemblyticsfalcon_23084:HG4_PB_SVrefine2PBcRDovetail_3591:HG4_PB_SVrefine2Falcon1Dovetail_4409:HG4_Ill_scalpel_7091:HG4_Ill_manta_1831:HG4_Ill_SVrefine2DISCOVARDovetail_5407:HG4_Ill_GATKHCSBGrefine_5167:HG4_10X_allpass_1453:HG2_PB_SVrefine2PB10Xhap12_5308:HG2_PB_SVrefine2Falcon1plusDovetail_10473:HG2_Ill_manta_2115:HG2_Ill_SVrefine2DISCOVARplusDovetail_11479:HG2_Ill_GATKHCSBGrefine_5086:HG2_10X_allpass_1241:HG2_10X_SVrefine210Xhap12_5218;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5218:HG2_10X_allpass_1241:HG2_Ill_GATKHCSBGrefine_5086:HG2_Ill_SVrefine2DISCOVARplusDovetail_11479:HG2_Ill_manta_2115:HG2_PB_SVrefine2Falcon1plusDovetail_10473:HG2_PB_SVrefine2PB10Xhap12_5308:HG4_10X_allpass_1453:HG4_Ill_GATKHCSBGrefine_5167:HG4_Ill_SVrefine2DISCOVARDovetail_5407:HG4_Ill_manta_1831:HG4_Ill_scalpel_7091:HG4_PB_SVrefine2Falcon1Dovetail_4409:HG4_PB_SVrefine2PBcRDovetail_3591:HG4_PB_assemblyticsfalcon_23084;NumExactMatchSVs=15;ClusterMaxShiftDist=0.120718;ClusterMaxSizeDiff=0.120718;ClusterMaxEditDist=0.120718;PBcalls=11;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=5168;DistForward=30260;DistMin=5168;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=6:129737071-129737403;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3506.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:48:0|1:40:1:1:42:./.:0:0:0:0:0/1:39:31:0/1:32:10:.:.:.
chr6	130959394	HG2_10X_SVrefine210Xhap12_5223	GCCCCAAAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGTCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1061:HG2_10X_allpass_1242:HG4_Ill_Krunchall_10892:HG2_Ill_Krunchall_10567:HG2_PB_HySA_13507:HG4_PB_pbsv_7292:HG2_PB_SVrefine2Falcon1plusDovetail_10479:HG2_Ill_tnscope_872:HG4_Ill_scalpel_7097:HG4_Ill_manta_1832:HG4_Ill_SVrefine2DISCOVARDovetail_5410:HG4_Ill_GATKHCSBGrefine_5173:HG4_10X_allpass_1455:HG2_PB_pbsv_7294:HG2_Ill_scalpel_7267:HG2_Ill_manta_2117:HG2_Ill_SVrefine2DISCOVARplusDovetail_11486:HG2_Ill_MetaSV_4473:HG2_Ill_GATKHCSBGrefine_5091:HG2_10X_SVrefine210Xhap12_5223;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5223:HG2_Ill_GATKHCSBGrefine_5091:HG2_Ill_MetaSV_4473:HG2_Ill_SVrefine2DISCOVARplusDovetail_11486:HG2_Ill_manta_2117:HG2_Ill_scalpel_7267:HG2_PB_pbsv_7294:HG4_10X_allpass_1455:HG4_Ill_GATKHCSBGrefine_5173:HG4_Ill_SVrefine2DISCOVARDovetail_5410:HG4_Ill_manta_1832:HG4_Ill_scalpel_7097;NumExactMatchSVs=12;ClusterMaxShiftDist=0.057508;ClusterMaxSizeDiff=0.057508;ClusterMaxEditDist=0.057508;PBcalls=4;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-476;DistForward=-307;DistMin=-476;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:130959395-130959728;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3507.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:34:0:1:17:./.:0:0:0:0:0/1:21:19:0/1:29:7:.:.:.
chr6	132081991	HG2_PB_SVrefine2PBcRplusDovetail_9755	ACAAATCACCACTAATATCAGGATGTGTATCCTTCTAGCACTGCTTGTATAGGGTCATAGTCTGTGTATTGATTATTATCTGTACCTATTTCCAAGCACTGTACCAAGTGCTCTGCATACATTATTTCATTTAACCTTTCCTTTATACTATGAGGTAAATGCTATTTTACAGATGTAGAAACTCTTGGCTATTCAAAGGGGGAGTAGAATTGAACCCTTTGGAACAACTG	CCCTGGCC	20	PASS	ClusterIDs=HG2_PB_pbsv_7297:HG4_Ill_GATKHCSBGrefine_5177:HG2_Ill_GATKHCSBGrefine_5096:HG4_PB_pbsv_7296:HG4_10X_allpass_1456:HG2_10X_allpass_1243:HG4_Ill_manta_1833:HG4_Ill_SVrefine2DISCOVARDovetail_5413:HG4_Ill_Cortex_3261:HG2_PB_SVrefine2PBcRplusDovetail_9755:HG2_PB_SVrefine2Falcon1plusDovetail_10482:HG2_Ill_manta_2119:HG2_Ill_Cortex_7974:HG2_10X_SVrefine210Xhap12_5227:HG2_Ill_SpiralSDKrefine_15124:HG4_Ill_MetaSV_4665:HG2_Ill_MetaSV_4476:HG4_Ill_Spiral_613:HG2_Ill_Spiral_533:HG2_PB_assemblyticsPBcR_22944:HG2_PB_assemblyticsfalcon_23698:HG4_Ill_Krunchall_10898:HG2_Ill_Krunchall_10576;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5227:HG2_Ill_Cortex_7974:HG2_Ill_manta_2119:HG2_PB_SVrefine2Falcon1plusDovetail_10482:HG2_PB_SVrefine2PBcRplusDovetail_9755:HG4_Ill_Cortex_3261:HG4_Ill_SVrefine2DISCOVARDovetail_5413:HG4_Ill_manta_1833;NumExactMatchSVs=8;ClusterMaxShiftDist=0.153132;ClusterMaxSizeDiff=0.153132;ClusterMaxEditDist=0.153132;PBcalls=6;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-222;DistBack=0;DistForward=29178;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:132081991-132082220;PctSeqSimilarity=0.964;PctSizeSimilarity=0.9867;PctRecOverlap=0.9826;SizeDiff=-3;StartDistance=-1;EndDistance=3;GTMatch=0;TruScore=97;MatchId=3508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:25:0|1:38:1:2:23:./.:0:0:0:0:0/1:49:16:./.:.:.:.:.:.
chr6	132223603	HG2_PB_HySA_13513	TGGGGAAGGGGCAAGTACCCCAACCCCTTCTCTCCTTGTCCCTACCCCTTCTCTGCTTTTCTGGG	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3597:HG4_PB_HySA_10775:HG2_Ill_SpiralSDKrefine_15126:HG2_PB_HySA_13513:HG4_PB_pbsv_7297;NumClusterSVs=5;ExactMatchIDs=HG2_PB_HySA_13513;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.0634921;ClusterMaxEditDist=0.0944882;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-64;DistBack=111825;DistForward=58893;DistMin=58893;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=100;REFWIDENED=6:132223596-132223759;PctSeqSimilarity=0.9649;PctSizeSimilarity=0.9688;PctRecOverlap=0.8923;SizeDiff=2;StartDistance=-7;EndDistance=-5;GTMatch=0;TruScore=94;MatchId=3509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:12:0|1:28:2:1:7:./.:0:0:0:0:0/0:22:0:./.:.:.:.:.:.
chr6	132337010	HG3_Ill_manta_1744	CATATATACACACATATATGTGTGTATATATACACACATATATATGTGTGTGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5228:HG4_PB_pbsv_7299:HG3_PB_HySA_11194:HG3_PB_assemblyticsfalcon_23562:HG4_PB_SVrefine2PBcRDovetail_3598:HG4_PB_SVrefine2Falcon1Dovetail_4419:HG4_Ill_svaba_9540:HG4_Ill_manta_1834:HG4_Ill_SVrefine2DISCOVARDovetail_5414:HG4_Ill_Krunchall_10900:HG4_Ill_GATKHC_12265:HG4_Ill_GATKHCSBGrefine_5178:HG4_Ill_250bpfermikitraw_10280:HG4_Ill_150bpfermikitraw_9867:HG3_PB_pbsv_7075:HG3_Ill_svaba_9530:HG3_Ill_scalpel_7365:HG3_Ill_manta_1744:HG3_Ill_SVrefine2DISCOVARDovetail_5576:HG3_Ill_Krunchall_10313:HG3_Ill_GATKHC_12201:HG3_Ill_GATKHCSBGrefine_5063:HG3_Ill_FB_6663:HG3_Ill_250bpfermikitraw_9965:HG3_Ill_150bpfermikitraw_9706:HG3_10X_allpass_1502:HG2_PB_pbsv_7299:HG2_PB_SVrefine2Falcon1plusDovetail_10484:HG2_Ill_svaba_9456:HG2_Ill_scalpel_7275:HG2_Ill_manta_2120:HG2_Ill_SpiralSDKrefine_15127:HG2_Ill_Krunchall_10579:HG2_Ill_GATKHC_12232:HG2_Ill_GATKHCSBGrefine_5098:HG2_Ill_250bpfermikitraw_10275:HG2_Ill_150bpfermikitraw_9678;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5228:HG4_PB_SVrefine2PBcRDovetail_3598:HG4_PB_SVrefine2Falcon1Dovetail_4419:HG4_Ill_svaba_9540:HG4_Ill_manta_1834:HG4_Ill_SVrefine2DISCOVARDovetail_5414:HG4_Ill_Krunchall_10900:HG4_Ill_GATKHC_12265:HG4_Ill_GATKHCSBGrefine_5178:HG4_Ill_250bpfermikitraw_10280:HG4_Ill_150bpfermikitraw_9867:HG3_PB_pbsv_7075:HG3_Ill_svaba_9530:HG3_Ill_scalpel_7365:HG3_Ill_manta_1744:HG3_Ill_SVrefine2DISCOVARDovetail_5576:HG3_Ill_Krunchall_10313:HG3_Ill_GATKHC_12201:HG3_Ill_GATKHCSBGrefine_5063:HG3_Ill_FB_6663:HG3_Ill_250bpfermikitraw_9965:HG3_Ill_150bpfermikitraw_9706:HG3_10X_allpass_1502:HG2_PB_pbsv_7299:HG2_PB_SVrefine2Falcon1plusDovetail_10484:HG2_Ill_svaba_9456:HG2_Ill_scalpel_7275:HG2_Ill_manta_2120:HG2_Ill_SpiralSDKrefine_15127:HG2_Ill_Krunchall_10579:HG2_Ill_GATKHC_12232:HG2_Ill_GATKHCSBGrefine_5098:HG2_Ill_250bpfermikitraw_10275:HG2_Ill_150bpfermikitraw_9678;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0380952;PBcalls=8;Illcalls=27;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=27;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=14;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=6110;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:132337011-132337077;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3510.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:33:./.:24:13:12:15:./.:0:0:0:0:0/1:47:32:./.:.:.:.:.:.
chr6	133341820	HG3_PB_SVrefine2PBcRDovetail_3331	TAGGTGTGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAATTACATATGTATACATGTGCCATGCTGGGGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCCTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGGCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATACTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCTATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGAGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTTGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCACTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTCGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAGTCGTTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCTGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCTTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5231:HG4_Ill_GATKHCSBGrefine_5184:HG3_Ill_GATKHCSBGrefine_5066:HG2_Ill_GATKHCSBGrefine_5104:HG3_10X_allpass_1503:HG4_10X_allpass_1459:HG2_Ill_SpiralSDKrefine_15132:HG2_PB_PB10Xdip_24691:HG4_PB_assemblyticsfalcon_23110:HG3_PB_assemblyticsfalcon_23567:HG2_PB_assemblyticsfalcon_23711:HG2_PB_assemblyticsPBcR_22955:HG2_10X_allpass_1244:HG2_Ill_Krunchall_10587:HG4_Ill_MetaSV_4670:HG3_Ill_MetaSV_4654:HG2_Ill_MetaSV_4478:HG4_PB_pbsv_7308:HG2_Ill_tnscope_873:HG4_PB_SVrefine2Falcon1Dovetail_4427:HG3_PB_pbsv_7081:HG3_PB_SVrefine2PBcRDovetail_3331:HG3_PB_SVrefine2Falcon1Dovetail_4382:HG3_Ill_Krunchall_10321:HG2_PB_pbsv_7304:HG2_PB_SVrefine2PBcRplusDovetail_9758:HG2_PB_SVrefine2PB10Xhap12_5319:HG2_PB_SVrefine2Falcon1plusDovetail_10488:HG2_Ill_SVrefine2DISCOVARplusDovetail_11490:HG2_Ill_Krunchall_10586;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5231:HG4_PB_SVrefine2Falcon1Dovetail_4427:HG3_PB_pbsv_7081:HG3_PB_SVrefine2PBcRDovetail_3331:HG3_PB_SVrefine2Falcon1Dovetail_4382:HG3_Ill_Krunchall_10321:HG2_PB_pbsv_7304:HG2_PB_SVrefine2PBcRplusDovetail_9758:HG2_PB_SVrefine2PB10Xhap12_5319:HG2_PB_SVrefine2Falcon1plusDovetail_10488:HG2_Ill_SVrefine2DISCOVARplusDovetail_11490:HG2_Ill_Krunchall_10586;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00727874;ClusterMaxSizeDiff=0.00727874;ClusterMaxEditDist=0.0074454;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-6065;DistBack=6184;DistForward=-6053;DistMin=-6053;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:133341821-133347899;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3511.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:10:108:1/1:2:23:1:23:./.:0:0:0:0:1/1:0:31:1/1:0:476:6326:.:.
chr6	134268976	HG3_Ill_GATKHCSBGrefine_5069	CAGAGTGTCCACCTGATTATTAGGAGTCTCCTCAGCAATGGATACATTTAATGTAGCAGATATACTTCATAGTTTTTAAACATTCAGGTAAGTCCTTCCAGATATCTCTTTCCCACACTTCCTTGTTGCCTATTTTTCAATGTCATTCTTTCCAAGTCACAGACTATCTATACAAATCATTAGCCACTGCCCATTCTGGTCATCTCTCGCTCCAGACATGCTGGGTAAACAAATGTACTGTTTGAATTATGCCCACCTGGAGGAGCTGCCTTCACCACTGCCCTTCCGGCGCCTGACTAGGGCTGGGATAGCCACCTGTGCTGCAGAAGATGGATTCTAGAGAGGCCTTCCATGCTGCAGGAGCCTGTCAGGGAAGCACACTGGAACCAGAAAGTAAACCCTTTCCTATTTCAATGCGTCTCTAGCATTCTCTATGGACAGAACTTACCATTGTGGTAGGTAGACCTACCTACCACATAGAGAATGCTGAGAGAAGTAGTAGAAGCCTATTTTAAGGGGTCAGATCCATCTATATAGAACAAGCATGAAAAGTGAATTTGGAACTGAGAGGCAACAAATAAATTACAGCACAGGTACTATAGAGCTGGCTAGCTTAGGTAGAAAAACTACCTCTCTGTCAATCACCGTGGCTATTGCAGCTCCCATTTGGTCTATCATTAGACTGGGGATAGGCAGAGAAGAAAAGTAGTTCTCCCAAAATAAGAGGGTGAAGCACTTTTCCCAAAAGA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1062:HG3_Ill_MetaSV_4656:HG2_Ill_Krunchall_10594:HG4_PB_pbsv_7314:HG3_PB_assemblyticsfalcon_23577:HG2_PB_assemblyticsfalcon_23720:HG2_PB_assemblyticsPBcR_22964:HG4_Ill_MetaSV_4672:HG2_Ill_tnscope_874:HG4_Ill_GATKHCSBGrefine_5187:HG4_Ill_Cortex_3264:HG4_10X_allpass_1463:HG3_PB_pbsv_7085:HG3_PB_SVrefine2Falcon1Dovetail_4387:HG3_Ill_manta_1746:HG3_Ill_GATKHCSBGrefine_5069:HG3_Ill_Cortex_3283:HG3_10X_allpass_1506:HG2_PB_pbsv_7309:HG2_PB_SVrefine2PBcRplusDovetail_9762:HG2_PB_SVrefine2PB10Xhap12_5323:HG2_PB_SVrefine2Falcon1plusDovetail_10492:HG2_Ill_manta_2123:HG2_Ill_SpiralSDKrefine_15138:HG2_Ill_SVrefine2DISCOVARplusDovetail_11493:HG2_Ill_MetaSV_4480:HG2_Ill_GATKHCSBGrefine_5106:HG2_Ill_Cortex_7980:HG2_10X_allpass_1246:HG2_10X_SVrefine210Xhap12_5234;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5234:HG2_10X_allpass_1246:HG2_Ill_Cortex_7980:HG2_Ill_GATKHCSBGrefine_5106:HG2_Ill_MetaSV_4480:HG2_Ill_SVrefine2DISCOVARplusDovetail_11493:HG2_Ill_SpiralSDKrefine_15138:HG2_Ill_manta_2123:HG2_PB_SVrefine2Falcon1plusDovetail_10492:HG2_PB_SVrefine2PB10Xhap12_5323:HG2_PB_SVrefine2PBcRplusDovetail_9762:HG2_PB_pbsv_7309:HG3_10X_allpass_1506:HG3_Ill_Cortex_3283:HG3_Ill_GATKHCSBGrefine_5069:HG3_Ill_manta_1746:HG3_PB_SVrefine2Falcon1Dovetail_4387:HG3_PB_pbsv_7085:HG4_10X_allpass_1463:HG4_Ill_Cortex_3264:HG4_Ill_GATKHCSBGrefine_5187;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0971246;ClusterMaxSizeDiff=0.0971246;ClusterMaxEditDist=0.0971246;PBcalls=10;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-748;DistBack=36064;DistForward=-745;DistMin=-745;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=6:134268977-134269728;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:1/1:0:14:1:17:./.:0:0:0:0:1/1:0:29:0/1:3:22:.:.:.
chr6	134353543	HG2_Ill_150bpfermikitraw_9688	AATATATATATATATATATATTTATATATATATATATATATATAAATATATATATATATATTTTTAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_7310:HG3_PB_HySA_11204:HG3_PB_pbsv_7086:HG2_PB_PB10Xdip_24694:HG2_PB_HySA_13538:HG2_PB_SVrefine2PBcRplusDovetail_9763:HG3_Ill_manta_1747:HG3_Ill_SVrefine2DISCOVARDovetail_5585:HG3_Ill_Krunchall_10327:HG3_Ill_GATKHC_12216:HG3_Ill_GATKHCSBGrefine_5070:HG3_Ill_250bpfermikitraw_9975:HG3_Ill_150bpfermikitraw_9721:HG3_10X_allpass_1507:HG2_Ill_manta_2124:HG2_Ill_breakscan11_1063:HG2_Ill_SpiralSDKrefine_15139:HG2_Ill_Krunchall_10596:HG2_Ill_GATKHC_12251:HG2_Ill_GATKHCSBGrefine_5107:HG2_Ill_250bpfermikitraw_10284:HG2_Ill_150bpfermikitraw_9688:HG2_10X_allpass_1247:HG2_10X_SVrefine210Xhap12_5235:HG3_PB_assemblyticsfalcon_23578:HG4_PB_assemblyticsfalcon_23119;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5235:HG2_10X_allpass_1247:HG2_Ill_150bpfermikitraw_9688:HG2_Ill_250bpfermikitraw_10284:HG2_Ill_GATKHCSBGrefine_5107:HG2_Ill_GATKHC_12251:HG2_Ill_Krunchall_10596:HG2_Ill_SpiralSDKrefine_15139:HG2_Ill_breakscan11_1063:HG2_Ill_manta_2124:HG3_10X_allpass_1507:HG3_Ill_150bpfermikitraw_9721:HG3_Ill_250bpfermikitraw_9975:HG3_Ill_GATKHCSBGrefine_5070:HG3_Ill_GATKHC_12216:HG3_Ill_Krunchall_10327:HG3_Ill_SVrefine2DISCOVARDovetail_5585:HG3_Ill_manta_1747;NumExactMatchSVs=18;ClusterMaxShiftDist=0.215385;ClusterMaxSizeDiff=0.215385;ClusterMaxEditDist=0.230769;PBcalls=8;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-66;DistBack=9851;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:134353544-134353625;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3513.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:36:./.:18:7:3:23:./.:0:0:0:0:0/1:26:24:./.:.:.:.:.:.
chr6	134817345	HG4_Ill_GATKHCSBGrefine_5195	TGAAACAGCAGTGGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_11210:HG2_Ill_Krunchall_10600:HG4_PB_assemblyticsfalcon_23130:HG2_PB_assemblyticsPBcR_22970:HG3_PB_assemblyticsfalcon_23586:HG2_PB_assemblyticsfalcon_23726:HG2_PB_HySA_13547:HG2_Ill_Spiral_534:HG4_Ill_Krunchall_10926:HG2_Ill_Krunchall_10599:HG2_PB_pbsv_7314:HG4_PB_pbsv_7324:HG4_Ill_MetaSV_4674:HG3_Ill_MetaSV_4657:HG2_Ill_tnscope_875:HG2_Ill_MetaSV_4481:HG4_PB_SVrefine2PBcRDovetail_3609:HG4_PB_SVrefine2Falcon1Dovetail_4437:HG4_Ill_manta_1841:HG4_Ill_GATKHCSBGrefine_5195:HG3_PB_pbsv_7091:HG3_PB_SVrefine2Falcon1Dovetail_4391:HG3_Ill_scalpel_7374:HG3_Ill_manta_1749:HG3_Ill_GATKHCSBGrefine_5073:HG3_10X_allpass_1511:HG2_PB_SVrefine2PBcRplusDovetail_9767:HG2_PB_SVrefine2PB10Xhap12_5326:HG2_PB_SVrefine2Falcon1plusDovetail_10495:HG2_Ill_manta_2125:HG2_Ill_SVrefine2DISCOVARplusDovetail_11497:HG2_Ill_GATKHCSBGrefine_5112:HG2_10X_allpass_1248:HG2_10X_SVrefine210Xhap12_5238:HG2_Ill_breakscan11_1064;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5238:HG2_10X_allpass_1248:HG2_Ill_GATKHCSBGrefine_5112:HG2_Ill_SVrefine2DISCOVARplusDovetail_11497:HG2_Ill_manta_2125:HG2_PB_SVrefine2Falcon1plusDovetail_10495:HG2_PB_SVrefine2PB10Xhap12_5326:HG2_PB_SVrefine2PBcRplusDovetail_9767:HG3_10X_allpass_1511:HG3_Ill_GATKHCSBGrefine_5073:HG3_Ill_manta_1749:HG3_Ill_scalpel_7374:HG3_PB_SVrefine2Falcon1Dovetail_4391:HG3_PB_pbsv_7091:HG4_Ill_GATKHCSBGrefine_5195:HG4_Ill_manta_1841:HG4_PB_SVrefine2Falcon1Dovetail_4437:HG4_PB_SVrefine2PBcRDovetail_3609;NumExactMatchSVs=18;ClusterMaxShiftDist=0.126783;ClusterMaxSizeDiff=0.126783;ClusterMaxEditDist=0.126783;PBcalls=15;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=6130;DistForward=7867;DistMin=6130;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:134817346-134817678;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3514.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:70:1/1:8:35:0:24:./.:0:0:0:0:1/1:0:46:./.:2:13:.:.:.
chr6	136235615	HG4_Ill_scalpel_7126	TTATAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCGCCTCAGCCTCCCGAGAGCTGGGACTACAGGCGCCCCTACCACGCCCGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4482:HG2_PB_PB10Xdip_24697:HG2_PB_SVrefine2PB10Xhap12_5328:HG2_PB_assemblyticsPBcR_22974:HG2_PB_assemblyticsfalcon_23731:HG4_Ill_Krunchall_10931:HG2_Ill_Krunchall_10606:HG4_Ill_Spiral_616:HG3_PB_assemblyticsfalcon_23594:HG3_PB_SVrefine2Falcon1Dovetail_4393:HG2_Ill_Spiral_535:HG2_PB_pbsv_7316:HG4_PB_pbsv_7325:HG4_PB_assemblyticsfalcon_23136:HG4_PB_SVrefine2PBcRDovetail_3610:HG4_PB_SVrefine2Falcon1Dovetail_4439:HG4_Ill_scalpel_7126:HG4_Ill_manta_1842:HG4_Ill_SVrefine2DISCOVARDovetail_5434:HG4_Ill_MetaSV_4675:HG4_Ill_GATKHCSBGrefine_5196:HG4_10X_allpass_1467:HG2_PB_SVrefine2PBcRplusDovetail_9768:HG2_PB_SVrefine2PB10Xhap12_5327:HG2_PB_SVrefine2Falcon1plusDovetail_10496:HG2_Ill_scalpel_7292:HG2_Ill_manta_2126:HG2_Ill_SVrefine2DISCOVARplusDovetail_11504:HG2_Ill_GATKHCSBGrefine_5113:HG2_10X_allpass_1249:HG2_10X_SVrefine210Xhap12_5242:HG2_Ill_tnscope_876:HG2_Ill_breakscan11_1065;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5242:HG2_10X_allpass_1249:HG2_Ill_GATKHCSBGrefine_5113:HG2_Ill_SVrefine2DISCOVARplusDovetail_11504:HG2_Ill_manta_2126:HG2_Ill_scalpel_7292:HG2_PB_SVrefine2Falcon1plusDovetail_10496:HG2_PB_SVrefine2PB10Xhap12_5327:HG2_PB_SVrefine2PBcRplusDovetail_9768:HG4_10X_allpass_1467:HG4_Ill_GATKHCSBGrefine_5196:HG4_Ill_MetaSV_4675:HG4_Ill_SVrefine2DISCOVARDovetail_5434:HG4_Ill_manta_1842:HG4_Ill_scalpel_7126:HG4_PB_SVrefine2Falcon1Dovetail_4439:HG4_PB_SVrefine2PBcRDovetail_3610:HG4_PB_assemblyticsfalcon_23136:HG4_PB_pbsv_7325;NumExactMatchSVs=19;ClusterMaxShiftDist=0.10628;ClusterMaxSizeDiff=0.10628;ClusterMaxEditDist=0.10628;PBcalls=14;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=57428;DistForward=-299;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:136235616-136235937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3515.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:0|1:26:0:0:31:./.:0:0:0:0:0/1:17:16:0/1:23:6:.:.:.
chr6	136256069	HG2_Ill_svaba_9473	TTAAATATATAATATATATTTATATATAATATATATATTTCTCTATATATTTTATATAGAGATGAAGTATATATTTATATATAAA	T	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9696:HG3_Ill_svaba_9551:HG3_Ill_GATKHC_12231:HG2_Ill_svaba_9473:HG2_Ill_manta_2127:HG2_Ill_GATKHC_12262:HG2_Ill_250bpfermikitraw_10294;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9696:HG3_Ill_svaba_9551:HG3_Ill_GATKHC_12231:HG2_Ill_svaba_9473:HG2_Ill_manta_2127:HG2_Ill_GATKHC_12262:HG2_Ill_250bpfermikitraw_10294;NumExactMatchSVs=7;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-84;DistBack=66;DistForward=-76;DistMin=-76;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=6:136256068-136256174;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:42:0|1:29:0:8:35:./.:0:0:0:0:0/1:21:9:./.:.:.:.:.:.
chr6	136880496	HG2_PB_SVrefine2Falcon1plusDovetail_10498	ACAAAAACAAAAACAAAAACAAAAACAAAAACAAGAAATGCATCCATATTAACTTC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_7319:HG2_PB_HySA_13558:HG4_PB_pbsv_7326:HG4_Ill_svaba_9562:HG4_Ill_Krunchall_10934:HG4_Ill_GATKHC_12302:HG4_Ill_GATKHCSBGrefine_5197:HG4_Ill_250bpfermikitraw_10307:HG4_Ill_150bpfermikitraw_9892:HG4_CG_vcfBeta_4867:HG4_10X_allpass_1468:HG3_Ill_svaba_9555:HG3_Ill_manta_1750:HG3_Ill_SVrefine2DISCOVARDovetail_5600:HG3_Ill_Krunchall_10346:HG3_Ill_GATKHC_12238:HG3_Ill_GATKHCSBGrefine_5076:HG3_Ill_250bpfermikitraw_9994:HG3_Ill_150bpfermikitraw_9738:HG3_CG_vcfBeta_4163:HG2_PB_SVrefine2PBcRplusDovetail_9770:HG2_PB_SVrefine2PB10Xhap12_5332:HG2_PB_SVrefine2Falcon1plusDovetail_10498:HG2_Ill_svaba_9476:HG2_Ill_scalpel_7297:HG2_Ill_manta_2128:HG2_Ill_SVrefine2DISCOVARplusDovetail_11507:HG2_Ill_Krunchall_10610:HG2_Ill_GATKHC_12266:HG2_Ill_GATKHCSBGrefine_5115:HG2_Ill_250bpfermikitraw_10300:HG2_Ill_150bpfermikitraw_9702:HG2_CG_vcfBeta_4365:HG2_10X_allpass_1250:HG2_10X_SVrefine210Xhap12_5244:HG3_PB_pbsv_7096;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5244:HG2_10X_allpass_1250:HG2_CG_vcfBeta_4365:HG2_Ill_150bpfermikitraw_9702:HG2_Ill_250bpfermikitraw_10300:HG2_Ill_GATKHCSBGrefine_5115:HG2_Ill_GATKHC_12266:HG2_Ill_Krunchall_10610:HG2_Ill_SVrefine2DISCOVARplusDovetail_11507:HG2_Ill_manta_2128:HG2_Ill_scalpel_7297:HG2_Ill_svaba_9476:HG2_PB_SVrefine2Falcon1plusDovetail_10498:HG2_PB_SVrefine2PB10Xhap12_5332:HG2_PB_SVrefine2PBcRplusDovetail_9770:HG3_CG_vcfBeta_4163:HG3_Ill_150bpfermikitraw_9738:HG3_Ill_250bpfermikitraw_9994:HG3_Ill_GATKHCSBGrefine_5076:HG3_Ill_GATKHC_12238:HG3_Ill_Krunchall_10346:HG3_Ill_SVrefine2DISCOVARDovetail_5600:HG3_Ill_manta_1750:HG3_Ill_svaba_9555:HG4_10X_allpass_1468:HG4_CG_vcfBeta_4867:HG4_Ill_150bpfermikitraw_9892:HG4_Ill_250bpfermikitraw_10307:HG4_Ill_GATKHCSBGrefine_5197:HG4_Ill_GATKHC_12302:HG4_Ill_Krunchall_10934:HG4_Ill_svaba_9562:HG4_PB_pbsv_7326;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.106195;PBcalls=7;Illcalls=23;TenXcalls=3;CGcalls=3;PBexactcalls=4;Illexactcalls=23;TenXexactcalls=3;CGexactcalls=3;HG2count=17;HG3count=10;HG4count=9;NumTechs=4;NumTechsExact=4;SVLEN=-55;DistBack=7395;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:136880497-136880563;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:./.:0:1:0:3:./.:0:0:0:0:1/1:0:57:./.:.:.:.:.:.
chr6	137313693	HG3_Ill_GATKHCSBGrefine_5078	TTAATTTTTGTGAAAGGTAGGTCTTTGTCTATATTCTTTTTTTTTTTTTTTTGGCATTATCTATCCAATTGTTCCAGCACCATTTGGTGAATGCTCAACCCTTTCTCCATCGAATTGCCTTGGGCCTTTGTCAGAGATCAGTTAACTATTGTGTGGGTCTATCTTTGAGGACTAATTAATATAAATTTAAAGATTCCTTTATTGAAACATTCTATCAGCAAATATTTCATTGAGTAACTACTATATGATCAGTACTGTTTCAGGTACTGGGAACATATCTAGGAGTCAGAAAGAGATTTACGGAAATAAGTTAGCTTTTGAGTCTCATTTGTACAGTATTTCCTTTTCTGGCAACCCAAAAACTTCATTAAGGAAAAAAGAAGGAGGTAAAAAGGACTTGCTTAAGCATCATGGCCATGAAGAAGGGAGAGGGGAAGATGACATTTCTAGACTGGAACTTATTTTTTGTAAGGATGAGAACTCAGAGGTGTCAG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4484:HG4_PB_SVrefine2PBcRDovetail_3612:HG4_PB_SVrefine2Falcon1Dovetail_4441:HG4_Ill_manta_1843:HG4_Ill_SVrefine2DISCOVARDovetail_5437:HG4_Ill_GATKHCSBGrefine_5199:HG4_10X_allpass_1469:HG3_PB_SVrefine2Falcon1Dovetail_4395:HG3_Ill_manta_1752:HG3_Ill_SVrefine2DISCOVARDovetail_5608:HG3_Ill_GATKHCSBGrefine_5078:HG3_10X_allpass_1512:HG2_PB_pbsv_7321:HG2_PB_assemblyticsPBcR_22988:HG2_PB_SVrefine2PBcRplusDovetail_9771:HG2_PB_SVrefine2PB10Xhap12_5334:HG2_PB_SVrefine2Falcon1plusDovetail_10500:HG2_Ill_manta_2130:HG2_Ill_SpiralSDKrefine_15152:HG2_Ill_SVrefine2DISCOVARplusDovetail_11512:HG2_Ill_MetaSV_4485:HG2_Ill_GATKHCSBGrefine_5116:HG2_10X_allpass_1251:HG2_10X_SVrefine210Xhap12_5245:HG4_Ill_Krunchall_10937:HG3_Ill_Krunchall_10351:HG2_Ill_breakscan11_1066:HG2_Ill_Krunchall_10615:HG4_PB_assemblyticsfalcon_23142:HG3_PB_assemblyticsfalcon_23600:HG2_PB_assemblyticsfalcon_23743:HG4_PB_pbsv_7328:HG3_PB_pbsv_7098:HG4_PB_HySA_10812:HG4_Ill_MetaSV_4677:HG3_PB_HySA_11223:HG3_Ill_Spiral_8078:HG3_Ill_MetaSV_4659:HG2_Ill_tnscope_877;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5245:HG2_10X_allpass_1251:HG2_Ill_GATKHCSBGrefine_5116:HG2_Ill_MetaSV_4485:HG2_Ill_SVrefine2DISCOVARplusDovetail_11512:HG2_Ill_SpiralSDKrefine_15152:HG2_Ill_manta_2130:HG2_PB_SVrefine2Falcon1plusDovetail_10500:HG2_PB_SVrefine2PB10Xhap12_5334:HG2_PB_SVrefine2PBcRplusDovetail_9771:HG2_PB_assemblyticsPBcR_22988:HG2_PB_pbsv_7321:HG3_10X_allpass_1512:HG3_Ill_GATKHCSBGrefine_5078:HG3_Ill_SVrefine2DISCOVARDovetail_5608:HG3_Ill_manta_1752:HG3_PB_SVrefine2Falcon1Dovetail_4395:HG4_10X_allpass_1469:HG4_Ill_GATKHCSBGrefine_5199:HG4_Ill_SVrefine2DISCOVARDovetail_5437:HG4_Ill_manta_1843:HG4_PB_SVrefine2Falcon1Dovetail_4441:HG4_PB_SVrefine2PBcRDovetail_3612;NumExactMatchSVs=23;ClusterMaxShiftDist=0.00404858;ClusterMaxSizeDiff=0.00404858;ClusterMaxEditDist=0.00405269;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-493;DistBack=1306;DistForward=-494;DistMin=-494;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:137313694-137314187;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3518.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:85:1/1:1:42:0:17:./.:0:0:0:0:1/1:0:36:0/1:2:13:.:.:.
chr6	139629102	HG2_Ill_SpiralSDKrefine_15165	GTAGTATTGACACCTGGGTTCTTCTGCATGCGAGATTTCAGAACCCAGGAA	G	20	PASS	ClusterIDs=HG2_PB_HySA_13577:HG4_PB_HySA_10833:HG4_Ill_svaba_9581:HG4_Ill_Krunchall_10953:HG4_Ill_GATKHC_12328:HG4_Ill_GATKHCSBGrefine_5208:HG4_Ill_250bpfermikitraw_10327:HG4_Ill_150bpfermikitraw_9911:HG3_PB_HySA_11238:HG3_Ill_svaba_9576:HG3_Ill_Krunchall_10372:HG3_Ill_GATKHC_12272:HG3_Ill_GATKHCSBGrefine_5085:HG3_Ill_250bpfermikitraw_10018:HG3_Ill_150bpfermikitraw_9760:HG2_Ill_svaba_9498:HG2_Ill_SpiralSDKrefine_15165:HG2_Ill_Krunchall_10631:HG2_Ill_GATKHC_12292:HG2_Ill_GATKHCSBGrefine_5123:HG2_Ill_250bpfermikitraw_10322:HG2_Ill_150bpfermikitraw_9724:HG4_PB_SVrefine2PBcRDovetail_3616:HG4_PB_SVrefine2Falcon1Dovetail_4444:HG4_Ill_SVrefine2DISCOVARDovetail_5448:HG3_PB_SVrefine2Falcon1Dovetail_4398:HG2_PB_SVrefine2Falcon1plusDovetail_10505:HG2_10X_SVrefine210Xhap12_5250;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9724:HG2_Ill_250bpfermikitraw_10322:HG2_Ill_GATKHCSBGrefine_5123:HG2_Ill_GATKHC_12292:HG2_Ill_Krunchall_10631:HG2_Ill_SpiralSDKrefine_15165:HG2_Ill_svaba_9498:HG3_Ill_150bpfermikitraw_9760:HG3_Ill_250bpfermikitraw_10018:HG3_Ill_GATKHCSBGrefine_5085:HG3_Ill_GATKHC_12272:HG3_Ill_Krunchall_10372:HG3_Ill_svaba_9576:HG3_PB_HySA_11238:HG4_Ill_150bpfermikitraw_9911:HG4_Ill_250bpfermikitraw_10327:HG4_Ill_GATKHCSBGrefine_5208:HG4_Ill_GATKHC_12328:HG4_Ill_Krunchall_10953:HG4_Ill_svaba_9581;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.0784314;PBcalls=7;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=-1;DistForward=-9;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=54;REFWIDENED=6:139629095-139629198;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3519.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:./.:19:7:8:17:./.:0:0:0:0:0/1:36:25:./.:.:.:.:.:.
chr6	140952890	HG4_Ill_svaba_9593	TAAGAATAATTAGCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1067:HG2_PB_HySA_13594:HG4_Ill_Krunchall_10967:HG3_Ill_Krunchall_10382:HG2_Ill_Krunchall_10642:HG2_PB_assemblyticsfalcon_23771:HG4_PB_assemblyticsfalcon_23165:HG3_PB_assemblyticsfalcon_23616:HG4_PB_pbsv_7339:HG2_PB_pbsv_7331:HG3_PB_pbsv_7107:HG4_Ill_MetaSV_4681:HG3_Ill_MetaSV_4665:HG2_Ill_tnscope_878:HG2_Ill_MetaSV_4488:HG4_PB_SVrefine2PBcRDovetail_3619:HG4_PB_SVrefine2Falcon1Dovetail_4447:HG4_Ill_svaba_9593:HG4_Ill_scalpel_7150:HG4_Ill_manta_1847:HG4_Ill_SVrefine2DISCOVARDovetail_5453:HG4_Ill_GATKHCSBGrefine_5211:HG4_10X_allpass_1471:HG3_PB_SVrefine2Falcon1Dovetail_4403:HG3_Ill_svaba_9587:HG3_Ill_scalpel_7410:HG3_Ill_manta_1754:HG3_Ill_SVrefine2DISCOVARDovetail_5621:HG3_Ill_GATKHCSBGrefine_5087:HG2_PB_SVrefine2PB10Xhap12_5341:HG2_PB_SVrefine2Falcon1plusDovetail_10509:HG2_Ill_svaba_9508:HG2_Ill_scalpel_7316:HG2_Ill_manta_2133:HG2_Ill_SpiralSDKrefine_15172:HG2_Ill_SVrefine2DISCOVARplusDovetail_11528:HG2_Ill_GATKHCSBGrefine_5125:HG2_10X_SVrefine210Xhap12_5256;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5256:HG2_Ill_GATKHCSBGrefine_5125:HG2_Ill_SVrefine2DISCOVARplusDovetail_11528:HG2_Ill_SpiralSDKrefine_15172:HG2_Ill_manta_2133:HG2_Ill_scalpel_7316:HG2_Ill_svaba_9508:HG2_PB_SVrefine2Falcon1plusDovetail_10509:HG2_PB_SVrefine2PB10Xhap12_5341:HG3_Ill_GATKHCSBGrefine_5087:HG3_Ill_SVrefine2DISCOVARDovetail_5621:HG3_Ill_manta_1754:HG3_Ill_scalpel_7410:HG3_Ill_svaba_9587:HG3_PB_SVrefine2Falcon1Dovetail_4403:HG4_10X_allpass_1471:HG4_Ill_GATKHCSBGrefine_5211:HG4_Ill_SVrefine2DISCOVARDovetail_5453:HG4_Ill_manta_1847:HG4_Ill_scalpel_7150:HG4_Ill_svaba_9593:HG4_PB_SVrefine2Falcon1Dovetail_4447:HG4_PB_SVrefine2PBcRDovetail_3619;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0915493;ClusterMaxSizeDiff=0.0915493;ClusterMaxEditDist=0.0950704;PBcalls=12;Illcalls=24;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-288;DistBack=-289;DistForward=-276;DistMin=-289;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=6:140952891-140953191;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3520.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:./.:0:42:0:4:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr6	141055221	HG3_10X_allpass_1515	CCACATGTGAGGATATAGATAGAAGGTGCCCTTTATTATCTGAAAAGTGGGCCCATATCAGACACAAAGGCTGTCTTAATCTTGGACTTCCCAACCTTCAGAATATTAAGAAATAAATTTTGTTTGTTTATAAGGCACCCAGTTTACGGTACTTTGTTATGGGAGCCCAGATGGATGGAGACAGACCTATAATACCTAGATCAGTATTTTTTAAAGCATGATGCATGGATGAGCTTCATTTAGGACTACCTACAGGTGTTTGTTAATAGTGATTGCTATGGCCTTACACTGGGCTTAATAAACCAGAATACTTAAATTCAAAACCACTGCTGAGCATGCCACTGCATGTAGAAAGGTGTGAGAGCCACTGAGTTAGAAAGAAAAATGATAGATAGTAGATAATCTATATTTAAGTCATTTTCTAATCACAAGCATTTATAATAGATTTGATAATAGTCTGTAAAGAAACGTCTTAGGAAACTAGTCCTGCTATATTCAGG	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4490:HG3_PB_assemblyticsfalcon_23624:HG4_PB_SVrefine2Falcon1Dovetail_4450:HG4_Ill_Cortex_3271:HG3_PB_pbsv_7112:HG3_PB_SVrefine2Falcon1Dovetail_4406:HG3_Ill_manta_1755:HG3_Ill_SVrefine2DISCOVARDovetail_5623:HG3_Ill_GATKHCSBGrefine_5088:HG3_Ill_Cortex_3295:HG3_10X_allpass_1515:HG2_PB_pbsv_7335:HG2_Ill_manta_2135:HG2_Ill_breakscan11_1068:HG2_Ill_SpiralSDKrefine_15177:HG2_Ill_GATKHCSBGrefine_5127:HG2_Ill_Cortex_7996:HG2_10X_allpass_1254:HG2_10X_SVrefine210Xhap12_5258:HG3_Ill_MetaSV_4668:HG2_PB_HySA_13605:HG2_Ill_tnscope_879;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5258:HG2_10X_allpass_1254:HG2_Ill_Cortex_7996:HG2_Ill_GATKHCSBGrefine_5127:HG2_Ill_SpiralSDKrefine_15177:HG2_Ill_breakscan11_1068:HG2_Ill_manta_2135:HG2_PB_pbsv_7335:HG3_10X_allpass_1515:HG3_Ill_Cortex_3295:HG3_Ill_GATKHCSBGrefine_5088:HG3_Ill_SVrefine2DISCOVARDovetail_5623:HG3_Ill_manta_1755:HG3_PB_SVrefine2Falcon1Dovetail_4406:HG3_PB_pbsv_7112:HG4_Ill_Cortex_3271:HG4_PB_SVrefine2Falcon1Dovetail_4450;NumExactMatchSVs=17;ClusterMaxShiftDist=0.01001;ClusterMaxSizeDiff=0.01001;ClusterMaxEditDist=0.01001;PBcalls=6;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-499;DistBack=-500;DistForward=-497;DistMin=-500;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=6:141055222-141055723;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3521.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:43:41:./.:9:13:24:6:./.:0:0:0:0:0/1:48:14:0/1:58:11:.:.:.
chr6	141325707	HG2_10X_allpass_1255	TAAAATCCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_536:HG2_PB_assemblyticsPBcR_23022:HG2_PB_SVrefine2PBcRplusDovetail_9781:HG2_PB_HySA_13609:HG4_Ill_Krunchall_10975:HG2_Ill_Krunchall_10651:HG4_PB_pbsv_7343:HG4_PB_SVrefine2Falcon1Dovetail_4451:HG4_Ill_MetaSV_4683:HG2_Ill_tnscope_880:HG2_Ill_MetaSV_4491:HG4_PB_SVrefine2PBcRDovetail_3620:HG4_Ill_scalpel_7155:HG4_Ill_manta_1848:HG4_Ill_SVrefine2DISCOVARDovetail_5456:HG4_Ill_GATKHCSBGrefine_5213:HG4_10X_allpass_1472:HG2_PB_pbsv_7336:HG2_Ill_scalpel_7320:HG2_Ill_manta_2136:HG2_Ill_SVrefine2DISCOVARplusDovetail_11530:HG2_Ill_GATKHCSBGrefine_5128:HG2_10X_allpass_1255:HG2_10X_SVrefine210Xhap12_5259:HG4_Ill_Spiral_618:HG2_Ill_breakscan11_1069;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5259:HG2_10X_allpass_1255:HG2_Ill_GATKHCSBGrefine_5128:HG2_Ill_SVrefine2DISCOVARplusDovetail_11530:HG2_Ill_manta_2136:HG2_Ill_scalpel_7320:HG2_PB_pbsv_7336:HG4_10X_allpass_1472:HG4_Ill_GATKHCSBGrefine_5213:HG4_Ill_SVrefine2DISCOVARDovetail_5456:HG4_Ill_manta_1848:HG4_Ill_scalpel_7155:HG4_PB_SVrefine2PBcRDovetail_3620;NumExactMatchSVs=13;ClusterMaxShiftDist=0.112518;ClusterMaxSizeDiff=0.112518;ClusterMaxEditDist=0.134286;PBcalls=7;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=20241;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:141325708-141326047;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:47:0|1:45:4:0:39:./.:0:0:0:0:0/1:26:27:0/1:28:4:.:.:.
chr6	141999706	HG4_Ill_Krunchall_10984	TATATATAATATATGTATATATAATATATAATATATGTATATATAATATATATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5261:HG2_PB_assemblyticsfalcon_23783:HG3_PB_HySA_11275:HG2_PB_pbsv_7341:HG3_PB_pbsv_7115:HG4_PB_pbsv_7350:HG4_Ill_svaba_9600:HG4_Ill_Krunchall_10984:HG4_Ill_GATKHC_12359:HG4_Ill_GATKHCSBGrefine_5220:HG4_Ill_250bpfermikitraw_10347:HG3_Ill_svaba_9594:HG3_Ill_scalpel_7417:HG3_Ill_manta_1757:HG3_Ill_Krunchall_10392:HG3_Ill_GATKHC_12296:HG3_Ill_GATKHCSBGrefine_5091:HG3_Ill_250bpfermikitraw_10040:HG3_Ill_150bpfermikitraw_9782:HG2_Ill_svaba_9514:HG2_Ill_SpiralSDKrefine_15183:HG2_Ill_GATKHC_12312:HG2_Ill_GATKHCSBGrefine_5131:HG2_Ill_250bpfermikitraw_10338:HG4_PB_SVrefine2PBcRDovetail_3625:HG4_PB_SVrefine2Falcon1Dovetail_4457:HG3_PB_SVrefine2Falcon1Dovetail_4410:HG3_Ill_SVrefine2DISCOVARDovetail_5628;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10338:HG2_Ill_GATKHCSBGrefine_5131:HG2_Ill_GATKHC_12312:HG2_Ill_SpiralSDKrefine_15183:HG2_Ill_svaba_9514:HG3_Ill_150bpfermikitraw_9782:HG3_Ill_250bpfermikitraw_10040:HG3_Ill_GATKHCSBGrefine_5091:HG3_Ill_GATKHC_12296:HG3_Ill_Krunchall_10392:HG3_Ill_manta_1757:HG3_Ill_scalpel_7417:HG3_Ill_svaba_9594:HG4_Ill_250bpfermikitraw_10347:HG4_Ill_GATKHCSBGrefine_5220:HG4_Ill_GATKHC_12359:HG4_Ill_Krunchall_10984:HG4_Ill_svaba_9600;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0560748;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.133333;PBcalls=8;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=-53;DistBack=3312;DistForward=-33;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=59;REFWIDENED=6:141999705-141999819;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:34:0|1:39:2:1:32:./.:0:0:0:0:0/1:25:16:./.:.:.:.:.:.
chr6	143161434	HG4_Ill_150bpfermikitraw_9942	TTTTTTTTTTTAATATTTTTTTATTTATTTTAATATTAAATATTTTAATATTTAATATTTTATTAAAATATTATTATTTTA	T	20	PASS	ClusterIDs=HG2_10X_allpass_1256:HG4_Ill_GATKHC_12372:HG4_Ill_GATKHCSBGrefine_5224:HG4_CG_vcfBeta_4902:HG3_Ill_GATKHC_12300:HG3_Ill_GATKHCSBGrefine_5094:HG3_CG_vcfBeta_4186:HG2_Ill_GATKHC_12322:HG2_Ill_GATKHCSBGrefine_5133:HG2_CG_vcfBeta_4394:HG3_PB_HySA_11279:HG2_Ill_SpiralSDKrefine_15189:HG2_PB_PB10Xdip_24727:HG4_Ill_manta_1851:HG4_Ill_Cortex_3277:HG3_Ill_manta_1760:HG3_Ill_Cortex_3298:HG2_Ill_manta_2141:HG2_Ill_Cortex_8001:HG4_Ill_Spiral_619:HG3_Ill_Spiral_8123:HG2_Ill_Spiral_537:HG4_PB_assemblyticsfalcon_23186:HG4_Ill_svaba_9611:HG4_Ill_scalpel_7167:HG4_Ill_Krunchall_10994:HG4_Ill_250bpfermikitraw_10357:HG4_Ill_150bpfermikitraw_9942:HG3_PB_assemblyticsfalcon_23637:HG3_Ill_svaba_9597:HG3_Ill_scalpel_7420:HG3_Ill_Krunchall_10395:HG3_Ill_250bpfermikitraw_10045:HG3_Ill_150bpfermikitraw_9787:HG2_Ill_svaba_9520:HG2_Ill_scalpel_7327:HG2_Ill_Krunchall_10661:HG2_Ill_250bpfermikitraw_10342:HG2_Ill_150bpfermikitraw_9748:HG2_PB_assemblyticsfalcon_23787:HG2_PB_assemblyticsPBcR_23035:HG2_PB_HySA_13622:HG4_10X_allpass_1474:HG4_PB_pbsv_7355:HG3_PB_pbsv_7120:HG2_PB_pbsv_7346:HG3_10X_allpass_1516;NumClusterSVs=47;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9748:HG2_Ill_250bpfermikitraw_10342:HG2_Ill_Krunchall_10661:HG2_Ill_scalpel_7327:HG2_Ill_svaba_9520:HG3_Ill_150bpfermikitraw_9787:HG3_Ill_250bpfermikitraw_10045:HG3_Ill_Krunchall_10395:HG3_Ill_scalpel_7420:HG3_Ill_svaba_9597:HG3_PB_assemblyticsfalcon_23637:HG4_Ill_150bpfermikitraw_9942:HG4_Ill_250bpfermikitraw_10357:HG4_Ill_Krunchall_10994:HG4_Ill_scalpel_7167:HG4_Ill_svaba_9611:HG4_PB_assemblyticsfalcon_23186;NumExactMatchSVs=17;ClusterMaxShiftDist=0.292398;ClusterMaxSizeDiff=0.292398;ClusterMaxEditDist=0.292398;PBcalls=10;Illcalls=31;TenXcalls=3;CGcalls=3;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=15;HG4count=14;NumTechs=4;NumTechsExact=2;SVLEN=-80;DistBack=36720;DistForward=16007;DistMin=16007;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:143161433-143161515;PctSeqSimilarity=0.9804;PctSizeSimilarity=0.9756;PctRecOverlap=0.9759;SizeDiff=-2;StartDistance=1;EndDistance=-1;GTMatch=0;TruScore=97;MatchId=3524.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:65:1/1:2:29:2:19:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr6	145127692	HG2_PB_SVrefine2Falcon1plusDovetail_10522	GCTATTATTGTAGCATTAATGTCTTTCCATTCATTCTCTGAAGCCACAGAGAAAGATGCATCTCTTTACAACTAAACTAATCAGACCTATTCCAACTGGACCCCATTTTACTATTGGAATTGTTCTTATATTCATTCCCTTCATGTGTAATCTTTGTGCAATAATTAAGTCACCATTAGCTTGAAGAAACCTTTGCTTGCTCACTCTTGTGCCTAAACCAGGTATCAAGTCTGGACATATTTCTCTCTCATTCGAAATACAAATTTTAGATGTACTATATTCTCAATGTAGAAAACAGGAAAAATATAAATGCAAGTATTCAGAAATCAT	TAAC	20	PASS	ClusterIDs=HG2_PB_pbsv_7351:HG4_Ill_GATKHCSBGrefine_5228:HG2_Ill_GATKHCSBGrefine_5135:HG2_Ill_SpiralSDKrefine_15195:HG2_10X_allpass_1257:HG4_10X_allpass_1475:HG4_PB_assemblyticsfalcon_23198:HG4_PB_SVrefine2Falcon1Dovetail_4465:HG2_Ill_tnscope_881:HG4_Ill_manta_1852:HG2_PB_assemblyticsfalcon_23800:HG2_PB_SVrefine2Falcon1plusDovetail_10522:HG2_Ill_manta_2142:HG2_Ill_SVrefine2DISCOVARplusDovetail_11545:HG2_10X_SVrefine210Xhap12_5274:HG4_Ill_Spiral_620:HG2_Ill_Spiral_538:HG4_Ill_svaba_9620:HG2_Ill_svaba_9529:HG4_PB_pbsv_7362:HG4_Ill_Krunchall_11001:HG2_Ill_Krunchall_10670:HG4_PB_SVrefine2PBcRDovetail_3629:HG4_Ill_MetaSV_4689:HG2_Ill_MetaSV_4496:HG2_PB_SVrefine2PB10Xhap12_5352:HG2_PB_PB10Xdip_24732;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5274:HG2_Ill_SVrefine2DISCOVARplusDovetail_11545:HG2_Ill_manta_2142:HG2_PB_SVrefine2Falcon1plusDovetail_10522:HG2_PB_assemblyticsfalcon_23800:HG4_Ill_manta_1852;NumExactMatchSVs=6;ClusterMaxShiftDist=0.36014;ClusterMaxSizeDiff=0.36014;ClusterMaxEditDist=0.36014;PBcalls=9;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=34539;DistForward=-321;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:145127692-145128021;PctSeqSimilarity=0.9815;PctSizeSimilarity=1;PctRecOverlap=0.9879;SizeDiff=0;StartDistance=1;EndDistance=4;GTMatch=0;TruScore=98;MatchId=3525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:33:0|1:33:0:1:24:./.:0:0:0:0:0/1:52:19:0/1:28:11:.:.:.
chr6	147108754	HG2_Ill_svaba_9535	CTCTTATTTCAACATTTCTTCATGCTCTTAAGTACTTTCCTATTGCCACCTT	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_539:HG3_PB_HySA_11293:HG2_PB_pbsv_7357:HG3_PB_pbsv_7131:HG4_PB_pbsv_7369:HG4_PB_SVrefine2Falcon1Dovetail_4469:HG4_Ill_svaba_9625:HG4_Ill_250bpfermikitraw_10371:HG3_PB_SVrefine2PBcRDovetail_3335:HG3_PB_SVrefine2Falcon1Dovetail_4424:HG3_Ill_svaba_9609:HG3_Ill_SVrefine2DISCOVARDovetail_5642:HG3_Ill_250bpfermikitraw_10064:HG3_Ill_150bpfermikitraw_9805:HG2_PB_SVrefine2PB10Xhap12_5356:HG2_PB_SVrefine2Falcon1plusDovetail_10525:HG2_Ill_svaba_9535:HG2_Ill_SpiralSDKrefine_15200:HG2_Ill_250bpfermikitraw_10360:HG3_Ill_Spiral_8133;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10360:HG2_Ill_SpiralSDKrefine_15200:HG2_Ill_svaba_9535:HG2_PB_SVrefine2Falcon1plusDovetail_10525:HG2_PB_SVrefine2PB10Xhap12_5356:HG3_Ill_150bpfermikitraw_9805:HG3_Ill_250bpfermikitraw_10064:HG3_Ill_SVrefine2DISCOVARDovetail_5642:HG3_Ill_svaba_9609:HG3_PB_SVrefine2Falcon1Dovetail_4424:HG3_PB_SVrefine2PBcRDovetail_3335:HG4_Ill_250bpfermikitraw_10371:HG4_Ill_svaba_9625:HG4_PB_SVrefine2Falcon1Dovetail_4469;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0392157;PBcalls=9;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=0;DistForward=-16;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=104;REFWIDENED=6:147108755-147108909;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:35:0|1:34:3:2:24:./.:0:0:0:0:0/1:29:22:./.:.:.:.:.:.
chr6	148506314	HG3_Ill_svaba_9617	CTACAGGCATGCACCAACATGCCCAGCTAAGTTTTTTATGTTTTAGTAGAGATGGGGTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGTCCTCGTAATCTGCCCATCTCAGCCTCCCAAATTGCTGGGAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5279:HG3_PB_HySA_11303:HG2_PB_HySA_13655:HG2_PB_pbsv_7361:HG3_PB_pbsv_7134:HG3_Ill_svaba_9617:HG3_Ill_scalpel_7440:HG3_Ill_MetaSV_4672:HG3_Ill_GATKHC_12326:HG3_Ill_GATKHCSBGrefine_5098:HG3_10X_allpass_1520:HG2_Ill_svaba_9540:HG2_Ill_scalpel_7338:HG2_Ill_manta_2144:HG2_Ill_MetaSV_4498:HG2_Ill_GATKHC_12350:HG2_Ill_GATKHCSBGrefine_5139:HG2_10X_allpass_1258:HG3_Ill_Spiral_8143:HG3_PB_SVrefine2PBcRDovetail_3338:HG3_Ill_SVrefine2DISCOVARDovetail_5647:HG2_PB_SVrefine2PBcRplusDovetail_9796:HG2_PB_SVrefine2PB10Xhap12_5358;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_1258:HG2_Ill_GATKHCSBGrefine_5139:HG2_Ill_GATKHC_12350:HG2_Ill_MetaSV_4498:HG2_Ill_manta_2144:HG2_Ill_scalpel_7338:HG2_Ill_svaba_9540:HG3_10X_allpass_1520:HG3_Ill_GATKHCSBGrefine_5098:HG3_Ill_GATKHC_12326:HG3_Ill_MetaSV_4672:HG3_Ill_scalpel_7440:HG3_Ill_svaba_9617:HG3_PB_pbsv_7134;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0294118;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0805861;PBcalls=7;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-134;DistBack=6233;DistForward=-109;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=50;REFWIDENED=6:148506291-148506474;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3527.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:69:34:0|1:64:5:5:23:./.:0:0:0:0:0/1:47:16:./.:.:.:.:.:.
chr6	149632778	HG3_CG_vcfBeta_4209	TACCACTGTCAATGCTAGTGTTAGTAACTGGTTTATAATTAGTAAATTTTGTATGCCCCAAATTCCTATCACATTTGTGCTTTACACCCATGTTATCAATATGCCATGTTCTACATTTAGCAATATTTTCTAAGATCTTATATTGGAATCTAGTCTCAAAAATGGAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_7141:HG2_PB_HySA_13669:HG4_PB_assemblyticsfalcon_23222:HG2_PB_assemblyticsfalcon_23824:HG2_PB_assemblyticsPBcR_23071:HG4_Ill_Krunchall_11030:HG3_Ill_Krunchall_10431:HG2_Ill_Krunchall_10692:HG4_Ill_MetaSV_4692:HG2_Ill_MetaSV_4500:HG4_PB_SVrefine2PBcRDovetail_3635:HG4_PB_SVrefine2Falcon1Dovetail_4473:HG4_Ill_svaba_9638:HG4_Ill_scalpel_7185:HG4_Ill_manta_1857:HG4_Ill_SVrefine2DISCOVARDovetail_5486:HG4_Ill_GATKHCSBGrefine_5237:HG4_Ill_Cortex_3281:HG4_Ill_250bpfermikitraw_10390:HG4_Ill_150bpfermikitraw_9972:HG4_CG_vcfBeta_4930:HG4_10X_allpass_1478:HG3_PB_assemblyticsfalcon_23676:HG3_PB_SVrefine2PBcRDovetail_3340:HG3_PB_SVrefine2Falcon1Dovetail_4430:HG3_Ill_svaba_9625:HG3_Ill_scalpel_7443:HG3_Ill_manta_1762:HG3_Ill_SVrefine2DISCOVARDovetail_5653:HG3_Ill_MetaSV_4674:HG3_Ill_GATKHCSBGrefine_5102:HG3_Ill_Cortex_3303:HG3_Ill_250bpfermikitraw_10088:HG3_Ill_150bpfermikitraw_9824:HG3_CG_vcfBeta_4209:HG3_10X_allpass_1521:HG2_PB_pbsv_7366:HG2_PB_SVrefine2PBcRplusDovetail_9798:HG2_PB_SVrefine2PB10Xhap12_5361:HG2_PB_SVrefine2Falcon1plusDovetail_10531:HG2_Ill_svaba_9546:HG2_Ill_scalpel_7341:HG2_Ill_manta_2145:HG2_Ill_SpiralSDKrefine_15210:HG2_Ill_SVrefine2DISCOVARplusDovetail_11557:HG2_Ill_GATKHCSBGrefine_5144:HG2_Ill_Cortex_8016:HG2_Ill_250bpfermikitraw_10380:HG2_Ill_150bpfermikitraw_9780:HG2_CG_vcfBeta_4410:HG2_10X_SVrefine210Xhap12_5281:HG4_PB_pbsv_7375:HG2_Ill_breakscan11_1070;NumClusterSVs=53;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5281:HG2_CG_vcfBeta_4410:HG2_Ill_150bpfermikitraw_9780:HG2_Ill_250bpfermikitraw_10380:HG2_Ill_Cortex_8016:HG2_Ill_GATKHCSBGrefine_5144:HG2_Ill_SVrefine2DISCOVARplusDovetail_11557:HG2_Ill_SpiralSDKrefine_15210:HG2_Ill_manta_2145:HG2_Ill_scalpel_7341:HG2_Ill_svaba_9546:HG2_PB_SVrefine2Falcon1plusDovetail_10531:HG2_PB_SVrefine2PB10Xhap12_5361:HG2_PB_SVrefine2PBcRplusDovetail_9798:HG2_PB_pbsv_7366:HG3_10X_allpass_1521:HG3_CG_vcfBeta_4209:HG3_Ill_150bpfermikitraw_9824:HG3_Ill_250bpfermikitraw_10088:HG3_Ill_Cortex_3303:HG3_Ill_GATKHCSBGrefine_5102:HG3_Ill_MetaSV_4674:HG3_Ill_SVrefine2DISCOVARDovetail_5653:HG3_Ill_manta_1762:HG3_Ill_scalpel_7443:HG3_Ill_svaba_9625:HG3_PB_SVrefine2Falcon1Dovetail_4430:HG3_PB_SVrefine2PBcRDovetail_3340:HG3_PB_assemblyticsfalcon_23676:HG4_10X_allpass_1478:HG4_CG_vcfBeta_4930:HG4_Ill_150bpfermikitraw_9972:HG4_Ill_250bpfermikitraw_10390:HG4_Ill_Cortex_3281:HG4_Ill_GATKHCSBGrefine_5237:HG4_Ill_SVrefine2DISCOVARDovetail_5486:HG4_Ill_manta_1857:HG4_Ill_scalpel_7185:HG4_Ill_svaba_9638:HG4_PB_SVrefine2Falcon1Dovetail_4473:HG4_PB_SVrefine2PBcRDovetail_3635;NumExactMatchSVs=41;ClusterMaxShiftDist=0.0421687;ClusterMaxSizeDiff=0.0421687;ClusterMaxEditDist=0.0421687;PBcalls=15;Illcalls=32;TenXcalls=3;CGcalls=3;PBexactcalls=9;Illexactcalls=26;TenXexactcalls=3;CGexactcalls=3;HG2count=21;HG3count=16;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-166;DistBack=57554;DistForward=-163;DistMin=-163;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=6:149632779-149632948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:76:./.:0:0:0:0:./.:0:0:0:0:1/1:0:68:./.:.:.:.:.:.
chr6	150302658	HG2_PB_SVrefine2Falcon1plusDovetail_10535	GGCGCCCGCCACCAGGCCCGGCTAATTTTTTGTATGTTTAGTAGAGACGGAGTTTCACGGTGCTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTACTGGGATTACAGGCGTGAGCCACC	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4504:HG4_Ill_Krunchall_11036:HG4_PB_pbsv_7380:HG4_PB_assemblyticsfalcon_23229:HG2_PB_assemblyticsfalcon_23831:HG2_PB_assemblyticsPBcR_23077:HG2_Ill_Krunchall_10698:HG2_PB_HySA_13677:HG4_PB_SVrefine2PBcRDovetail_3641:HG4_PB_SVrefine2Falcon1Dovetail_4476:HG4_Ill_svaba_9643:HG4_Ill_scalpel_7188:HG4_Ill_SVrefine2DISCOVARDovetail_5491:HG4_Ill_MetaSV_4698:HG4_Ill_GATKHCSBGrefine_5245:HG4_10X_allpass_1480:HG2_PB_pbsv_7372:HG2_PB_SVrefine2PBcRplusDovetail_9803:HG2_PB_SVrefine2PB10Xhap12_5366:HG2_PB_SVrefine2Falcon1plusDovetail_10535:HG2_Ill_svaba_9551:HG2_Ill_manta_2147:HG2_Ill_SpiralSDKrefine_15214:HG2_Ill_GATKHCSBGrefine_5157:HG2_10X_allpass_1260:HG2_Ill_Spiral_541;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_1260:HG2_Ill_GATKHCSBGrefine_5157:HG2_Ill_SpiralSDKrefine_15214:HG2_Ill_manta_2147:HG2_Ill_svaba_9551:HG2_PB_SVrefine2Falcon1plusDovetail_10535:HG2_PB_SVrefine2PB10Xhap12_5366:HG2_PB_SVrefine2PBcRplusDovetail_9803:HG2_PB_pbsv_7372:HG4_10X_allpass_1480:HG4_Ill_GATKHCSBGrefine_5245:HG4_Ill_MetaSV_4698:HG4_Ill_SVrefine2DISCOVARDovetail_5491:HG4_Ill_scalpel_7188:HG4_Ill_svaba_9643:HG4_PB_SVrefine2Falcon1Dovetail_4476:HG4_PB_SVrefine2PBcRDovetail_3641;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0905923;ClusterMaxSizeDiff=0.0905923;ClusterMaxEditDist=0.0905923;PBcalls=11;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-146;DistBack=-22;DistForward=-126;DistMin=-126;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6799;REFWIDENED=6:150295867-150312646;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3529.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:34:0|1:30:2:1:31:./.:0:0:0:0:0/1:41:14:./.:.:.:.:.:.
chr6	151485839	HG2_PB_SVrefine2PBcRplusDovetail_9809	GGGCTGGGTGCGGTGGCTTATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAACCCGGGTGGTGGAGGTTGCAGTGAGCCGAGATTGTGCCACTGTACTCCAGCCTGGGTGACAGAGCGAGACTCTGTCTCAAAAATAAGTAAATAAATAAGTAATAAAAATAAAAATTACAGAGTAGGATTTTGTGTCAACCAAAATCATTCCTAAGAATCTGCACGGGAATCACCAAGCCCAGAGGGTACTCTTCAGGCTTTATCCTCTTGGCCTCATTGTGCTATCTATGGGTGGGCTCAGGGTTCCTACAGGAAACTTGTTGGAAGTCTCACCCCTGACTACAGCTACAATTCTCTCGCCTTTCCTCTTACTTTGCAGGTCATTGTTTCTCAGCCTCTCATGGACCCTTCTTCTTACACACCTTTTATATATATTTTTTCAATTATTTATTAATTGAATAGGTAATACACACATGGTACAAAACAAAAGGTAAAAAGGGGTGTATAGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGTTGAGGCGGGCGGCTCAAGAGGTCAGGAGATCGAGATCAACCTGACCGACATAGTGAAACCTTGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTAGCGGGCGTCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGTGGAGCTTGCAGTGAGCCAAGATCGCGTCACTGCAATCCAGCCTGGGTGACAGAGCAAGACTCTGTCTCAAAAAAAAAACAAACAAAAGGGTTTATAGTAAAAGTTAAGACTCTCTTCCTTACCATCCATGTTATTTCTCTCCCCAAAGACTGTTACTTTCCTATATTTTCTTCCAGAGATATTTTATGCATATATAATCAAAAATATTC	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4506:HG4_10X_allpass_1481:HG2_10X_allpass_1261:HG3_PB_pbsv_7154:HG2_PB_pbsv_7380:HG4_PB_pbsv_7390:HG4_PB_HySA_10934:HG4_Ill_MetaSV_4702:HG4_Ill_GATKHCSBGrefine_5249:HG3_Ill_GATKHCSBGrefine_5119:HG2_Ill_GATKHCSBGrefine_5162:HG4_PB_SVrefine2PBcRDovetail_3646:HG4_PB_SVrefine2Falcon1Dovetail_4483:HG4_Ill_SVrefine2DISCOVARDovetail_5499:HG3_PB_SVrefine2PBcRDovetail_3348:HG3_PB_SVrefine2Falcon1Dovetail_4442:HG3_Ill_SVrefine2DISCOVARDovetail_5671:HG2_PB_SVrefine2PBcRplusDovetail_9809:HG2_PB_SVrefine2PB10Xhap12_5372:HG2_PB_SVrefine2Falcon1plusDovetail_10541:HG2_Ill_SVrefine2DISCOVARplusDovetail_11575:HG2_10X_SVrefine210Xhap12_5299:HG2_Ill_tnscope_883:HG3_Ill_MetaSV_4679;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5299:HG2_Ill_SVrefine2DISCOVARplusDovetail_11575:HG2_PB_SVrefine2Falcon1plusDovetail_10541:HG2_PB_SVrefine2PB10Xhap12_5372:HG2_PB_SVrefine2PBcRplusDovetail_9809:HG3_Ill_SVrefine2DISCOVARDovetail_5671:HG3_PB_SVrefine2Falcon1Dovetail_4442:HG3_PB_SVrefine2PBcRDovetail_3348:HG4_Ill_SVrefine2DISCOVARDovetail_5499:HG4_PB_SVrefine2Falcon1Dovetail_4483:HG4_PB_SVrefine2PBcRDovetail_3646;NumExactMatchSVs=11;ClusterMaxShiftDist=0.201624;ClusterMaxSizeDiff=0.201624;ClusterMaxEditDist=0.201624;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1073;DistBack=10805;DistForward=-788;DistMin=-788;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=284;REFWIDENED=6:151485840-151487196;PctSeqSimilarity=0.9803;PctSizeSimilarity=1;PctRecOverlap=0.9767;SizeDiff=0;StartDistance=-25;EndDistance=-25;GTMatch=0;TruScore=98;MatchId=3530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:2:10:0:8:./.:0:0:0:0:./.:2:32:./.:5:56:1095:.:.
chr6	152100940	HG2_PB_pbsv_7382	AAAATGTGGCGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCACCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAGG	A	20	PASS	ClusterIDs=HG3_PB_HySA_11342:HG2_PB_HySA_13695:HG3_PB_pbsv_7156:HG3_PB_SVrefine2PBcRDovetail_3351:HG3_Ill_svaba_9652:HG3_Ill_scalpel_7457:HG3_Ill_SVrefine2DISCOVARDovetail_5675:HG3_Ill_GATKHC_12372:HG3_Ill_GATKHCSBGrefine_5121:HG2_PB_pbsv_7382:HG2_PB_SVrefine2PB10Xhap12_5374:HG2_Ill_svaba_9565:HG2_Ill_scalpel_7353:HG2_Ill_manta_2149:HG2_Ill_GATKHC_12383:HG2_Ill_GATKHCSBGrefine_5164;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5164:HG2_Ill_GATKHC_12383:HG2_Ill_manta_2149:HG2_Ill_scalpel_7353:HG2_Ill_svaba_9565:HG2_PB_SVrefine2PB10Xhap12_5374:HG2_PB_pbsv_7382:HG3_Ill_GATKHCSBGrefine_5121:HG3_Ill_GATKHC_12372:HG3_Ill_SVrefine2DISCOVARDovetail_5675:HG3_Ill_scalpel_7457:HG3_Ill_svaba_9652:HG3_PB_SVrefine2PBcRDovetail_3351;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0169492;ClusterMaxSizeDiff=0.0169492;ClusterMaxEditDist=0.0169492;PBcalls=6;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-117;DistBack=13299;DistForward=-105;DistMin=-105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=6:152100936-152101066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3531.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:0|1:26:1:0:34:./.:0:0:0:0:0/1:19:29:./.:.:.:.:.:.
chr6	153029971	HG2_PB_SVrefine2PB10Xhap12_5376	ACCTGAAAGAGTATTTATTTTTTTATTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTACCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAACGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCACTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAACCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCGTGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCTGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTCAATTCCTGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACCCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5306:HG4_10X_allpass_1483:HG3_10X_allpass_1524:HG2_PB_PB10Xdip_24765:HG2_PB_assemblyticsPBcR_23099:HG4_Ill_Krunchall_11063:HG3_Ill_Krunchall_10464:HG2_Ill_Krunchall_10725:HG2_Ill_tnscope_884:HG4_PB_pbsv_7398:HG4_PB_SVrefine2PBcRDovetail_3649:HG4_Ill_SVrefine2DISCOVARDovetail_5509:HG4_Ill_MetaSV_4705:HG4_Ill_GATKHCSBGrefine_5252:HG3_PB_pbsv_7159:HG3_PB_SVrefine2PBcRDovetail_3353:HG3_Ill_SVrefine2DISCOVARDovetail_5682:HG3_Ill_MetaSV_4680:HG3_Ill_GATKHCSBGrefine_5123:HG2_PB_pbsv_7386:HG2_PB_SVrefine2PBcRplusDovetail_9812:HG2_PB_SVrefine2PB10Xhap12_5376:HG2_Ill_breakscan11_1072:HG2_Ill_MetaSV_4507:HG2_Ill_GATKHCSBGrefine_5166;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5306:HG4_PB_pbsv_7398:HG4_PB_SVrefine2PBcRDovetail_3649:HG4_Ill_SVrefine2DISCOVARDovetail_5509:HG4_Ill_MetaSV_4705:HG4_Ill_GATKHCSBGrefine_5252:HG3_PB_pbsv_7159:HG3_PB_SVrefine2PBcRDovetail_3353:HG3_Ill_SVrefine2DISCOVARDovetail_5682:HG3_Ill_MetaSV_4680:HG3_Ill_GATKHCSBGrefine_5123:HG2_PB_pbsv_7386:HG2_PB_SVrefine2PBcRplusDovetail_9812:HG2_PB_SVrefine2PB10Xhap12_5376:HG2_Ill_breakscan11_1072:HG2_Ill_MetaSV_4507:HG2_Ill_GATKHCSBGrefine_5166;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0256886;ClusterMaxSizeDiff=0.0256886;ClusterMaxEditDist=0.0256886;PBcalls=9;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3818;DistBack=11156;DistForward=19804;DistMin=11156;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=6:153029972-153033808;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3532.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:61:0|1:36:0:0:34:./.:0:0:0:0:0/1:56:25:0/1:285:147:4000:.:.
chr6	153165968	HG4_10X_allpass_1484	GGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAAAAAAAATAAAGCCTTTTATTAACACTCCTCTGTGAAGCCTGCTATGCACCTATTCCTGCTAT	G	20	PASS	ClusterIDs=HG2_PB_HySA_13703:HG3_PB_assemblyticsfalcon_23708:HG4_PB_HySA_10940:HG4_PB_assemblyticsfalcon_23254:HG2_PB_assemblyticsfalcon_23853:HG2_PB_assemblyticsPBcR_23100:HG4_PB_pbsv_7399:HG4_PB_SVrefine2PBcRDovetail_3650:HG4_PB_SVrefine2Falcon1Dovetail_4487:HG4_Ill_svaba_9666:HG4_Ill_scalpel_7202:HG4_Ill_MetaSV_4706:HG4_Ill_GATKHCSBGrefine_5253:HG4_CG_vcfBeta_4946:HG4_10X_allpass_1484:HG3_PB_pbsv_7160:HG3_PB_SVrefine2PBcRDovetail_3354:HG3_PB_SVrefine2Falcon1Dovetail_4446:HG3_Ill_svaba_9661:HG3_Ill_scalpel_7462:HG3_Ill_MetaSV_4681:HG3_Ill_GATKHC_12383:HG3_Ill_GATKHCSBGrefine_5124:HG2_PB_pbsv_7387:HG2_PB_SVrefine2PBcRplusDovetail_9813:HG2_PB_SVrefine2PB10Xhap12_5377:HG2_PB_SVrefine2Falcon1plusDovetail_10545:HG2_Ill_svaba_9572:HG2_Ill_scalpel_7359:HG2_Ill_MetaSV_4508:HG2_Ill_GATKHCSBGrefine_5167:HG2_10X_allpass_1262:HG2_10X_SVrefine210Xhap12_5307;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5307:HG2_10X_allpass_1262:HG2_Ill_GATKHCSBGrefine_5167:HG2_Ill_MetaSV_4508:HG2_Ill_scalpel_7359:HG2_Ill_svaba_9572:HG2_PB_SVrefine2Falcon1plusDovetail_10545:HG2_PB_SVrefine2PB10Xhap12_5377:HG2_PB_SVrefine2PBcRplusDovetail_9813:HG2_PB_pbsv_7387:HG3_Ill_GATKHCSBGrefine_5124:HG3_Ill_GATKHC_12383:HG3_Ill_MetaSV_4681:HG3_Ill_scalpel_7462:HG3_Ill_svaba_9661:HG3_PB_SVrefine2Falcon1Dovetail_4446:HG3_PB_SVrefine2PBcRDovetail_3354:HG3_PB_pbsv_7160:HG4_10X_allpass_1484:HG4_CG_vcfBeta_4946:HG4_Ill_GATKHCSBGrefine_5253:HG4_Ill_MetaSV_4706:HG4_Ill_scalpel_7202:HG4_Ill_svaba_9666:HG4_PB_SVrefine2Falcon1Dovetail_4487:HG4_PB_SVrefine2PBcRDovetail_3650:HG4_PB_pbsv_7399;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0728745;ClusterMaxSizeDiff=0.0728745;ClusterMaxEditDist=0.0728745;PBcalls=16;Illcalls=13;TenXcalls=3;CGcalls=1;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=1;HG2count=13;HG3count=9;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-125;DistBack=-91;DistForward=-21;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=6:153165969-153166098;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3533.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:21:0|1:21:0:1:20:./.:0:0:0:0:0/1:35:14:./.:.:.:.:.:.
chr6	153210743	HG4_Ill_manta_1861	ACTGTCAGAAAGACTGGAATGATTGTATTGGCTGAGTTTATTATTTTGAAATCTTAACACTGCACTTTACATCCAGGT	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_10407:HG3_PB_assemblyticsfalcon_23709:HG2_PB_HySA_13704:HG4_PB_HySA_10941:HG3_PB_pbsv_7161:HG4_Ill_Spiral_623:HG3_Ill_Spiral_8174:HG2_Ill_Spiral_542:HG2_PB_PB10Xdip_24766:HG4_PB_pbsv_7400:HG2_PB_pbsv_7388:HG4_PB_assemblyticsfalcon_23255:HG4_Ill_svaba_9667:HG4_Ill_manta_1861:HG4_Ill_Krunchall_11064:HG4_Ill_GATKHCSBGrefine_5254:HG4_Ill_250bpfermikitraw_10414:HG3_Ill_svaba_9662:HG3_Ill_scalpel_7463:HG3_Ill_Krunchall_10466:HG3_Ill_GATKHCSBGrefine_5125:HG3_Ill_250bpfermikitraw_10119:HG2_Ill_svaba_9573:HG2_Ill_scalpel_7360:HG2_Ill_manta_2150:HG2_Ill_SpiralSDKrefine_15234:HG2_Ill_Krunchall_10726:HG2_Ill_GATKHCSBGrefine_5168;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10407:HG4_PB_assemblyticsfalcon_23255:HG4_Ill_svaba_9667:HG4_Ill_manta_1861:HG4_Ill_Krunchall_11064:HG4_Ill_GATKHCSBGrefine_5254:HG4_Ill_250bpfermikitraw_10414:HG3_Ill_svaba_9662:HG3_Ill_scalpel_7463:HG3_Ill_Krunchall_10466:HG3_Ill_GATKHCSBGrefine_5125:HG3_Ill_250bpfermikitraw_10119:HG2_Ill_svaba_9573:HG2_Ill_scalpel_7360:HG2_Ill_manta_2150:HG2_Ill_SpiralSDKrefine_15234:HG2_Ill_Krunchall_10726:HG2_Ill_GATKHCSBGrefine_5168;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0653595;ClusterMaxSizeDiff=0.0653595;ClusterMaxEditDist=0.08;PBcalls=8;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-77;DistBack=44642;DistForward=41724;DistMin=41724;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=79;REFWIDENED=6:153210744-153210899;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3534.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:28:0|1:42:1:2:26:./.:0:0:0:0:0/1:37:18:./.:.:.:.:.:.
chr6	153408248	HG2_Ill_scalpel_7362	TCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCACGCTTGTAATCCCAGCTA	T	20	PASS	ClusterIDs=HG2_PB_HySA_13708:HG4_PB_pbsv_7404:HG4_Ill_svaba_9669:HG4_Ill_scalpel_7204:HG4_Ill_manta_1863:HG4_Ill_Krunchall_11066:HG4_Ill_GATKHC_12451:HG4_Ill_GATKHCSBGrefine_5255:HG4_Ill_250bpfermikitraw_10416:HG4_Ill_150bpfermikitraw_9999:HG4_CG_vcfBeta_4949:HG3_PB_pbsv_7163:HG3_Ill_svaba_9664:HG3_Ill_scalpel_7465:HG3_Ill_manta_1765:HG3_Ill_Krunchall_10468:HG3_Ill_GATKHC_12388:HG3_Ill_GATKHCSBGrefine_5126:HG3_Ill_250bpfermikitraw_10121:HG3_Ill_150bpfermikitraw_9854:HG3_CG_vcfBeta_4224:HG3_10X_allpass_1525:HG2_PB_pbsv_7391:HG2_PB_assemblyticsfalcon_23858:HG2_PB_assemblyticsPBcR_23104:HG2_Ill_svaba_9575:HG2_Ill_scalpel_7362:HG2_Ill_manta_2152:HG2_Ill_SpiralSDKrefine_15236:HG2_Ill_Krunchall_10728:HG2_Ill_GATKHC_12396:HG2_Ill_GATKHCSBGrefine_5169:HG2_Ill_250bpfermikitraw_10409:HG2_Ill_150bpfermikitraw_9805:HG2_CG_vcfBeta_4424:HG2_10X_allpass_1263:HG3_PB_assemblyticsfalcon_23715;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_1263:HG2_CG_vcfBeta_4424:HG2_Ill_150bpfermikitraw_9805:HG2_Ill_250bpfermikitraw_10409:HG2_Ill_GATKHCSBGrefine_5169:HG2_Ill_GATKHC_12396:HG2_Ill_Krunchall_10728:HG2_Ill_SpiralSDKrefine_15236:HG2_Ill_manta_2152:HG2_Ill_scalpel_7362:HG2_Ill_svaba_9575:HG2_PB_assemblyticsPBcR_23104:HG2_PB_assemblyticsfalcon_23858:HG2_PB_pbsv_7391:HG3_10X_allpass_1525:HG3_CG_vcfBeta_4224:HG3_Ill_150bpfermikitraw_9854:HG3_Ill_250bpfermikitraw_10121:HG3_Ill_GATKHCSBGrefine_5126:HG3_Ill_GATKHC_12388:HG3_Ill_Krunchall_10468:HG3_Ill_manta_1765:HG3_Ill_scalpel_7465:HG3_Ill_svaba_9664:HG3_PB_pbsv_7163:HG4_CG_vcfBeta_4949:HG4_Ill_150bpfermikitraw_9999:HG4_Ill_250bpfermikitraw_10416:HG4_Ill_GATKHCSBGrefine_5255:HG4_Ill_GATKHC_12451:HG4_Ill_Krunchall_11066:HG4_Ill_manta_1863:HG4_Ill_scalpel_7204:HG4_Ill_svaba_9669;NumExactMatchSVs=34;ClusterMaxShiftDist=0.123894;ClusterMaxSizeDiff=0.123894;ClusterMaxEditDist=0.125;PBcalls=7;Illcalls=25;TenXcalls=2;CGcalls=3;PBexactcalls=4;Illexactcalls=25;TenXexactcalls=2;CGexactcalls=3;HG2count=15;HG3count=12;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-59;DistBack=32340;DistForward=21528;DistMin=21528;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=6:153408249-153408310;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:43:0|1:22:4:2:36:./.:0:0:0:0:0/1:39:38:./.:.:.:.:.:.
chr6	153794127	HG4_Ill_150bpfermikitraw_10002	GGAATTAAAGTTAATTTTCTCATAGTTCTGGAGGCTGAGAAGTCAAAGACCAACCTGAGACTGAGTAACTTATAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5309:HG4_Ill_Krunchall_11069:HG4_Ill_GATKHCSBGrefine_5257:HG4_Ill_250bpfermikitraw_10419:HG4_Ill_150bpfermikitraw_10002:HG3_Ill_Krunchall_10470:HG3_Ill_GATKHCSBGrefine_5128:HG3_Ill_250bpfermikitraw_10123:HG3_Ill_150bpfermikitraw_9856:HG2_PB_assemblyticsfalcon_23864:HG2_Ill_Krunchall_10731:HG2_Ill_GATKHCSBGrefine_5172:HG2_Ill_250bpfermikitraw_10412:HG2_Ill_150bpfermikitraw_9808:HG3_PB_HySA_11357:HG3_PB_pbsv_7165:HG4_PB_pbsv_7407:HG2_PB_pbsv_7394:HG4_PB_SVrefine2PBcRDovetail_3652:HG4_PB_SVrefine2Falcon1Dovetail_4490:HG4_Ill_SVrefine2DISCOVARDovetail_5513:HG3_PB_SVrefine2PBcRDovetail_3357:HG3_PB_SVrefine2Falcon1Dovetail_4449:HG3_Ill_SVrefine2DISCOVARDovetail_5688:HG2_PB_SVrefine2PBcRplusDovetail_9815:HG2_PB_SVrefine2PB10Xhap12_5380:HG2_Ill_SVrefine2DISCOVARplusDovetail_11589;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9808:HG2_Ill_250bpfermikitraw_10412:HG2_Ill_GATKHCSBGrefine_5172:HG2_Ill_Krunchall_10731:HG2_PB_assemblyticsfalcon_23864:HG3_Ill_150bpfermikitraw_9856:HG3_Ill_250bpfermikitraw_10123:HG3_Ill_GATKHCSBGrefine_5128:HG3_Ill_Krunchall_10470:HG4_Ill_150bpfermikitraw_10002:HG4_Ill_250bpfermikitraw_10419:HG4_Ill_GATKHCSBGrefine_5257:HG4_Ill_Krunchall_11069;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0263158;ClusterMaxSizeDiff=0.0263158;ClusterMaxEditDist=0.0266667;PBcalls=11;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-75;DistBack=-52;DistForward=6883;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=151;REFWIDENED=6:153794029-153794254;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3536.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:77:1/1:0:6:1:5:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr6	154174422	HG3_Ill_150bpfermikitraw_9860	CATAGTCTGTGAAATGGCAAAGCTTCTGAAATGTTGAACACATTATCAAAGTTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5310:HG2_PB_pbsv_7395:HG2_PB_HySA_13712:HG2_Ill_Spiral_543:HG3_PB_pbsv_7166:HG3_PB_assemblyticsfalcon_23720:HG3_PB_HySA_11360:HG3_Ill_svaba_9671:HG3_Ill_scalpel_7467:HG3_Ill_manta_1766:HG3_Ill_Krunchall_10472:HG3_Ill_GATKHC_12391:HG3_Ill_GATKHCSBGrefine_5129:HG3_Ill_250bpfermikitraw_10127:HG3_Ill_150bpfermikitraw_9860:HG2_Ill_svaba_9582:HG2_Ill_manta_2153:HG2_Ill_SpiralSDKrefine_15240:HG2_Ill_Krunchall_10733:HG2_Ill_GATKHCSBGrefine_5173:HG2_Ill_250bpfermikitraw_10416:HG2_Ill_150bpfermikitraw_9812:HG3_PB_SVrefine2PBcRDovetail_3358:HG3_Ill_SVrefine2DISCOVARDovetail_5690:HG2_PB_SVrefine2PB10Xhap12_5381:HG2_PB_SVrefine2Falcon1plusDovetail_10549:HG2_Ill_SVrefine2DISCOVARplusDovetail_11592;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9812:HG2_Ill_250bpfermikitraw_10416:HG2_Ill_GATKHCSBGrefine_5173:HG2_Ill_Krunchall_10733:HG2_Ill_SpiralSDKrefine_15240:HG2_Ill_manta_2153:HG2_Ill_svaba_9582:HG3_Ill_150bpfermikitraw_9860:HG3_Ill_250bpfermikitraw_10127:HG3_Ill_GATKHCSBGrefine_5129:HG3_Ill_GATKHC_12391:HG3_Ill_Krunchall_10472:HG3_Ill_manta_1766:HG3_Ill_scalpel_7467:HG3_Ill_svaba_9671:HG3_PB_HySA_11360;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0560748;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.0761905;PBcalls=8;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-53;DistBack=7;DistForward=55289;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=60;REFWIDENED=6:154174416-154174528;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3537.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:33:0|1:35:2:2:29:./.:0:0:0:0:0/1:26:26:./.:.:.:.:.:.
chr6	154446915	HG3_Ill_SVrefine2DISCOVARDovetail_5692	AGGCTAGACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTACAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGATCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	A	20	PASS	ClusterIDs=HG4_PB_HySA_10955:HG4_PB_assemblyticsfalcon_23265:HG2_PB_assemblyticsfalcon_23873:HG2_PB_assemblyticsPBcR_23114:HG3_PB_assemblyticsfalcon_23724:HG4_Ill_Krunchall_11075:HG2_Ill_Krunchall_10740:HG4_Ill_Spiral_624:HG3_Ill_Spiral_8183:HG2_Ill_Spiral_544:HG2_PB_pbsv_7398:HG3_PB_pbsv_7169:HG4_PB_pbsv_7410:HG4_Ill_MetaSV_4708:HG2_PB_HySA_13718:HG2_Ill_tnscope_885:HG2_Ill_MetaSV_4510:HG4_PB_SVrefine2PBcRDovetail_3654:HG4_PB_SVrefine2Falcon1Dovetail_4492:HG4_Ill_svaba_9678:HG4_Ill_scalpel_7209:HG4_Ill_manta_1864:HG4_Ill_SVrefine2DISCOVARDovetail_5515:HG4_Ill_Krunchall_11074:HG4_Ill_GATKHCSBGrefine_5258:HG4_10X_allpass_1485:HG3_PB_SVrefine2PBcRDovetail_3360:HG3_PB_SVrefine2Falcon1Dovetail_4451:HG3_Ill_svaba_9680:HG3_Ill_scalpel_7470:HG3_Ill_manta_1767:HG3_Ill_SVrefine2DISCOVARDovetail_5692:HG3_Ill_MetaSV_4683:HG3_Ill_Krunchall_10481:HG3_Ill_GATKHCSBGrefine_5130:HG3_10X_allpass_1526:HG2_PB_SVrefine2PBcRplusDovetail_9817:HG2_PB_SVrefine2PB10Xhap12_5384:HG2_PB_SVrefine2Falcon1plusDovetail_10551:HG2_Ill_svaba_9591:HG2_Ill_scalpel_7368:HG2_Ill_manta_2155:HG2_Ill_breakscan11_1073:HG2_Ill_SpiralSDKrefine_15246:HG2_Ill_SVrefine2DISCOVARplusDovetail_11594:HG2_Ill_Krunchall_10739:HG2_Ill_GATKHCSBGrefine_5174:HG2_10X_allpass_1264:HG2_10X_SVrefine210Xhap12_5311;NumClusterSVs=49;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5311:HG2_10X_allpass_1264:HG2_Ill_GATKHCSBGrefine_5174:HG2_Ill_Krunchall_10739:HG2_Ill_SVrefine2DISCOVARplusDovetail_11594:HG2_Ill_SpiralSDKrefine_15246:HG2_Ill_breakscan11_1073:HG2_Ill_manta_2155:HG2_Ill_scalpel_7368:HG2_Ill_svaba_9591:HG2_PB_SVrefine2Falcon1plusDovetail_10551:HG2_PB_SVrefine2PB10Xhap12_5384:HG2_PB_SVrefine2PBcRplusDovetail_9817:HG3_10X_allpass_1526:HG3_Ill_GATKHCSBGrefine_5130:HG3_Ill_Krunchall_10481:HG3_Ill_MetaSV_4683:HG3_Ill_SVrefine2DISCOVARDovetail_5692:HG3_Ill_manta_1767:HG3_Ill_scalpel_7470:HG3_Ill_svaba_9680:HG3_PB_SVrefine2Falcon1Dovetail_4451:HG3_PB_SVrefine2PBcRDovetail_3360:HG4_10X_allpass_1485:HG4_Ill_GATKHCSBGrefine_5258:HG4_Ill_Krunchall_11074:HG4_Ill_SVrefine2DISCOVARDovetail_5515:HG4_Ill_manta_1864:HG4_Ill_scalpel_7209:HG4_Ill_svaba_9678:HG4_PB_SVrefine2Falcon1Dovetail_4492:HG4_PB_SVrefine2PBcRDovetail_3654;NumExactMatchSVs=32;ClusterMaxShiftDist=0.136012;ClusterMaxSizeDiff=0.136012;ClusterMaxEditDist=0.136012;PBcalls=16;Illcalls=29;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=21;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=25484;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:154446916-154447252;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3538.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:0:29:0:16:./.:0:0:0:0:1/1:0:40:0/1:3:16:.:.:.
chr6	154584931	HG2_Ill_GATKHCSBGrefine_5177	GCTCCTCACTTCCCAGTAGGGGCGGCCAGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5387:HG4_PB_assemblyticsfalcon_23267:HG2_PB_assemblyticsPBcR_23116:HG2_10X_SVrefine210Xhap12_5314:HG3_PB_SVrefine2PBcRDovetail_3361:HG2_10X_SVrefine210Xhap12_5313:HG2_PB_assemblyticsfalcon_23875:HG2_PB_SVrefine2Falcon1plusDovetail_10553:HG4_PB_SVrefine2Falcon1Dovetail_4494:HG2_PB_SVrefine2PBcRplusDovetail_9819:HG2_PB_HySA_13720:HG3_PB_HySA_11370:HG3_PB_pbsv_7170:HG2_PB_pbsv_7401:HG3_Ill_GATKHCSBGrefine_5131:HG2_Ill_MetaSV_4511:HG2_Ill_GATKHCSBGrefine_5177:HG2_PB_HySA_13719:HG4_PB_pbsv_7413:HG3_PB_SVrefine2Falcon1Dovetail_4452;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5177:HG2_Ill_MetaSV_4511:HG3_Ill_GATKHCSBGrefine_5131;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.078125;PBcalls=15;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=-127;DistBack=111405;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=137;REFWIDENED=6:154584899-154585162;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3539.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:79:1/1:2:33:2:39:./.:0:0:0:0:1/1:0:21:./.:.:.:.:.:.
chr6	154619960	HG2_PB_pbsv_7402	GTGGCGCATGCCTGTAATCCCAAGTACTTGGGAAGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCGGAGGTTGCAGTAAGCTGAGATAGCCCCATTGCACTCCGACCTGGGCAACAAGAGCGAAACTCCATCTCAAAAAAAAAAAAAAGATTACCAATATTAGCATTGTGCACATGCATACACACATAATCTAAGGAAGAAGAATGCCAATGTTCCTCTTTATCCCAGGATGTTAACCCAAAGAGTTTAGGAAATACTGCTATTTCTTTCACAAATCAGTTGTGAATCATTCATGCCTTAAAATCCTGTTGTCAGTGGTTAGCATCCTAAAGCCCCTCTCGGTCCTCCCATGAGTGCTTTATTAAGCTGGGATAAAGCTACTCCATGCCCAACAATAAGCAAGGCTCTGTGCAGCTGAGAGAAGAGACCAGGGGACAATTGCTGAGAGCCTAGGGGAGGTGGGCGGGTCCACACTTAGCAGTTTCACTTGGGCTGCAGGGCATACTTTCATTCAAAGAAAGAGTCTTTCATGGAATCAACCCAAATGCCCATCAATGACAGACTGGATAAAGAAAATGTGGCACATATATATCATGGAATACTACGCAGTCATAAAAAGGAATGAGATCATGTCCTTTGCAGGGACATAGATGAAGCTGGAAACCATTATCCTTAGCAAACACTGCATGCCCTCACTTATAAGTGGGAGCTGAACGATGAGAAAACATGGACACATGAAGGGGCACAACACACACTGACTAGGGCTTCTAGGGGAGGTGTGGGTACTGAGAACATCGGGAAAAACAGCTAATGCATGCTGGGCTTAATACCTAGGTGATGGGTTGATAGGTGCAGCAAACCACCGTGGCACACATTTACCTATGTAACCAACCTGCACATCCTGCACATGTATCCTGGAACTTAAAACGAAATAAAATAAAAAATTAAAGATGGGTTGATGGATGGATAGAGGGATGGATAAAAGGACTGATAAGCAATAAAGCAAATACCATAAAATGTTTAAAAAAAGAAAAGAAAAAAGAAAGTAGTCTATGACTTAAAAAAAAAAACTTGGAAAACTGTGAATCTATACTCTTCAATTTTGCAAAAATTTAGCAATTCTGTGCCCGAATCATGTATAACATTCATCAGTTGGCATATTACTTTAAAAATGAAACCCCGAAGTGAATGAAGACTTCACCTCACCAGTCATTTTCCAAGCCCCATGCATGGAGGAAGCATTTCTCCCATGACTGCGAACGGTGTTTTGTCTTCCCTCCCAAAAGGAAAGAACAATTACTTTACAACTTCATGAAAGCTGAAATGCAGGCAGACCTCTTTGTGGGTAAAGTCTAAAGCAGATGCAATTTTAGGTTAAACATAGAGTATTATTACTTATTCTGATTCTTCAACTGAGCCTCTGAAAATATTTATTTTCTATTTGTTTAAATGTAGGTATTGAGAGACATGGCTTCCTTTTTTCTTTCTTTGTTAAACAAATGCTCAGATGTGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5315:HG2_10X_allpass_1266:HG4_Ill_Krunchall_11078:HG2_Ill_Krunchall_10744:HG4_10X_allpass_1486:HG4_PB_pbsv_7414:HG4_PB_SVrefine2PBcRDovetail_3656:HG4_Ill_MetaSV_4709:HG2_Ill_MetaSV_4512:HG2_Ill_tnscope_886:HG4_PB_SVrefine2Falcon1Dovetail_4495:HG2_PB_pbsv_7402:HG2_PB_SVrefine2PB10Xhap12_5388;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5315:HG4_PB_SVrefine2Falcon1Dovetail_4495:HG2_PB_pbsv_7402:HG2_PB_SVrefine2PB10Xhap12_5388;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0179581;ClusterMaxSizeDiff=0.0179581;ClusterMaxEditDist=0.0186294;PBcalls=5;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-1515;DistBack=25071;DistForward=-1486;DistMin=-1486;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=54;REFWIDENED=6:154619961-154621529;PctSeqSimilarity=0.9563;PctSizeSimilarity=1;PctRecOverlap=0.9809;SizeDiff=0;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=97;MatchId=3540.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:30:./.:13:9:20:8:./.:0:0:0:0:0/1:67:20:0/1:143:48:1457:.:.
chr6	154678773	HG2_PB_pbsv_7405	TATAATATATATATATAATATATATATTATATATATATTATATATATATTATATATAATATATATATTATATATATATTATATATATAATATATATATTATATATATTATATATATATAATATATAAAATATATATATTATATATATAAAATATATATAATATATATAATA	T	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_5694:HG4_PB_pbsv_7418:HG3_Ill_Krunchall_10484:HG3_PB_HySA_11372:HG2_PB_pbsv_7405:HG2_Ill_SpiralSDKrefine_15249:HG4_PB_SVrefine2Falcon1Dovetail_4496:HG2_Ill_manta_2158:HG3_PB_pbsv_7171;NumClusterSVs=9;ExactMatchIDs=HG2_PB_pbsv_7405;NumExactMatchSVs=1;ClusterMaxShiftDist=0.306931;ClusterMaxSizeDiff=0.306931;ClusterMaxEditDist=0.306931;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-170;DistBack=9;DistForward=-154;DistMin=-154;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=209;REFWIDENED=6:154678763-154679141;PctSeqSimilarity=0.9119;PctSizeSimilarity=0.9714;PctRecOverlap=0.1534;SizeDiff=-5;StartDistance=-144;EndDistance=-149;GTMatch=0;TruScore=67;MatchId=3541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:64:25:./.:51:6:6:15:./.:0:0:0:0:0/1:18:6:./.:.:.:.:.:.
chr6	154686517	HG2_Ill_MetaSV_4513	TAAGAAAATCATATCCCAGCACTTTGGAAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGATCGAGACTCCGTCTCAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5316:HG4_Ill_GATKHCSBGrefine_5264:HG2_Ill_GATKHCSBGrefine_5178:HG2_Ill_manta_2159:HG2_PB_pbsv_7406:HG4_Ill_MetaSV_4712:HG2_Ill_MetaSV_4514:HG2_Ill_Krunchall_10747:HG4_PB_HySA_10960:HG2_PB_assemblyticsfalcon_23878:HG2_PB_assemblyticsPBcR_23120:HG2_PB_SVrefine2PB10Xhap12_5390:HG4_PB_pbsv_7419:HG3_PB_SVrefine2Falcon1Dovetail_4453:HG3_PB_assemblyticsfalcon_23727:HG4_PB_SVrefine2PBcRDovetail_3658:HG4_Ill_MetaSV_4711:HG4_10X_allpass_1487:HG2_PB_SVrefine2PBcRplusDovetail_9820:HG2_PB_SVrefine2PB10Xhap12_5389:HG2_PB_SVrefine2Falcon1plusDovetail_10554:HG2_Ill_scalpel_7370:HG2_Ill_SVrefine2DISCOVARplusDovetail_11595:HG2_Ill_MetaSV_4513:HG2_10X_allpass_1267;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5316:HG4_PB_SVrefine2PBcRDovetail_3658:HG4_Ill_MetaSV_4711:HG4_10X_allpass_1487:HG2_PB_SVrefine2PBcRplusDovetail_9820:HG2_PB_SVrefine2PB10Xhap12_5389:HG2_PB_SVrefine2Falcon1plusDovetail_10554:HG2_Ill_scalpel_7370:HG2_Ill_SVrefine2DISCOVARplusDovetail_11595:HG2_Ill_MetaSV_4513:HG2_10X_allpass_1267;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0765027;ClusterMaxSizeDiff=0.0765027;ClusterMaxEditDist=0.0765027;PBcalls=12;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-276;DistBack=654;DistForward=-267;DistMin=-267;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=6:154686518-154686805;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9964;PctRecOverlap=0.9639;SizeDiff=1;StartDistance=-10;EndDistance=-9;GTMatch=0;TruScore=98;MatchId=3542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:26:./.:14:11:13:8:./.:0:0:0:0:0/1:21:15:./.:.:.:.:.:.
chr6	154817449	HG2_PB_SVrefine2PB10Xhap12_5391	GGCAACCAGGACTTGAGGGGTCACAACCCTGGAAAGACATGAAAGTGAATCCAACCTTCTCTCCCACATTTCCGTTTAAGGCTTTTCTGGTTCCACAGCAGCCCGCAGGAGAGGCCAGGCAGGAAGCAGCCAGGGCTCTGAGTACAGGAGAAGCACCATCTGATTGCTTTAATAAGAGCAAACAAGAGAATAAAGCCAT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_7420:HG2_PB_SVrefine2PB10Xhap12_5392:HG2_PB_PB10Xdip_24775:HG2_PB_HySA_13727:HG4_PB_assemblyticsfalcon_23270:HG4_PB_SVrefine2Falcon1Dovetail_4497:HG4_Ill_svaba_9686:HG4_Ill_scalpel_7213:HG4_Ill_manta_1867:HG4_Ill_SVrefine2DISCOVARDovetail_5519:HG4_Ill_MetaSV_4713:HG4_Ill_GATKHCSBGrefine_5265:HG2_PB_assemblyticsfalcon_23881:HG2_PB_assemblyticsPBcR_23121:HG2_PB_SVrefine2PBcRplusDovetail_9821:HG2_PB_SVrefine2PB10Xhap12_5391:HG2_PB_SVrefine2Falcon1plusDovetail_10555:HG2_Ill_svaba_9602:HG2_Ill_scalpel_7372:HG2_Ill_manta_2160:HG2_Ill_SpiralSDKrefine_15252:HG2_Ill_SVrefine2DISCOVARplusDovetail_11596:HG2_Ill_MetaSV_4515:HG2_Ill_GATKHCSBGrefine_5179:HG2_10X_SVrefine210Xhap12_5318:HG4_Ill_Krunchall_11083:HG2_Ill_Krunchall_10751:HG2_PB_pbsv_7407:HG4_PB_HySA_10964;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5318:HG2_Ill_GATKHCSBGrefine_5179:HG2_Ill_MetaSV_4515:HG2_Ill_SVrefine2DISCOVARplusDovetail_11596:HG2_Ill_SpiralSDKrefine_15252:HG2_Ill_manta_2160:HG2_Ill_scalpel_7372:HG2_Ill_svaba_9602:HG2_PB_SVrefine2Falcon1plusDovetail_10555:HG2_PB_SVrefine2PB10Xhap12_5391:HG2_PB_SVrefine2PBcRplusDovetail_9821:HG2_PB_assemblyticsPBcR_23121:HG2_PB_assemblyticsfalcon_23881:HG4_Ill_GATKHCSBGrefine_5265:HG4_Ill_MetaSV_4713:HG4_Ill_SVrefine2DISCOVARDovetail_5519:HG4_Ill_manta_1867:HG4_Ill_scalpel_7213:HG4_Ill_svaba_9686:HG4_PB_SVrefine2Falcon1Dovetail_4497:HG4_PB_assemblyticsfalcon_23270;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0594059;ClusterMaxSizeDiff=0.0594059;ClusterMaxEditDist=0.0594059;PBcalls=13;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-198;DistBack=-199;DistForward=8749;DistMin=-199;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:154817450-154817647;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:36:0|1:13:0:3:31:./.:0:0:0:0:0/1:39:26:./.:.:.:.:.:.
chr6	158509037	HG3_Ill_GATKHCSBGrefine_5147	ATTTTAACAGTTTATTCCCCTGCTTTGGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_7442:HG2_PB_assemblyticsfalcon_23918:HG4_PB_assemblyticsfalcon_23303:HG3_PB_assemblyticsfalcon_23758:HG2_PB_HySA_13786:HG2_Ill_Spiral_547:HG4_PB_HySA_11015:HG4_Ill_svaba_9725:HG4_Ill_scalpel_7232:HG4_Ill_manta_1875:HG4_Ill_Krunchall_11123:HG4_Ill_GATKHC_12523:HG4_Ill_GATKHCSBGrefine_5282:HG4_Ill_250bpfermikitraw_10472:HG4_Ill_150bpfermikitraw_10050:HG4_CG_vcfBeta_4982:HG4_10X_allpass_1491:HG3_PB_HySA_11415:HG3_Ill_svaba_9720:HG3_Ill_scalpel_7504:HG3_Ill_manta_1774:HG3_Ill_Krunchall_10520:HG3_Ill_GATKHC_12449:HG3_Ill_GATKHCSBGrefine_5147:HG3_Ill_250bpfermikitraw_10178:HG3_Ill_150bpfermikitraw_9906:HG3_CG_vcfBeta_4252:HG3_10X_allpass_1528:HG2_PB_pbsv_7432:HG2_PB_assemblyticsPBcR_23154:HG2_Ill_svaba_9634:HG2_Ill_scalpel_7395:HG2_Ill_manta_2173:HG2_Ill_breakscan11_1075:HG2_Ill_SpiralSDKrefine_15277:HG2_Ill_Krunchall_10791:HG2_Ill_GATKHC_12468:HG2_Ill_GATKHCSBGrefine_5201:HG2_Ill_250bpfermikitraw_10471:HG2_Ill_150bpfermikitraw_9867:HG2_CG_vcfBeta_4450:HG3_PB_pbsv_7194;NumClusterSVs=42;ExactMatchIDs=HG2_CG_vcfBeta_4450:HG2_Ill_150bpfermikitraw_9867:HG2_Ill_250bpfermikitraw_10471:HG2_Ill_GATKHCSBGrefine_5201:HG2_Ill_GATKHC_12468:HG2_Ill_Krunchall_10791:HG2_Ill_SpiralSDKrefine_15277:HG2_Ill_breakscan11_1075:HG2_Ill_manta_2173:HG2_Ill_scalpel_7395:HG2_Ill_svaba_9634:HG2_PB_assemblyticsPBcR_23154:HG2_PB_pbsv_7432:HG3_10X_allpass_1528:HG3_CG_vcfBeta_4252:HG3_Ill_150bpfermikitraw_9906:HG3_Ill_250bpfermikitraw_10178:HG3_Ill_GATKHCSBGrefine_5147:HG3_Ill_GATKHC_12449:HG3_Ill_Krunchall_10520:HG3_Ill_manta_1774:HG3_Ill_scalpel_7504:HG3_Ill_svaba_9720:HG3_PB_HySA_11415:HG4_10X_allpass_1491:HG4_CG_vcfBeta_4982:HG4_Ill_150bpfermikitraw_10050:HG4_Ill_250bpfermikitraw_10472:HG4_Ill_GATKHCSBGrefine_5282:HG4_Ill_GATKHC_12523:HG4_Ill_Krunchall_11123:HG4_Ill_manta_1875:HG4_Ill_scalpel_7232:HG4_Ill_svaba_9725:HG4_PB_HySA_11015;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0330578;PBcalls=10;Illcalls=27;TenXcalls=2;CGcalls=3;PBexactcalls=4;Illexactcalls=26;TenXexactcalls=2;CGexactcalls=3;HG2count=16;HG3count=13;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-60;DistBack=12047;DistForward=14436;DistMin=12047;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=6:158509038-158509101;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:25:0:22:./.:0:0:0:0:1/1:0:20:./.:.:.:.:.:.
chr6	158876076	HG2_Ill_manta_2177	GCAAATTTAACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAATGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_549:HG3_10X_allpass_1531:HG2_10X_allpass_1271:HG2_PB_assemblyticsfalcon_23931:HG2_PB_assemblyticsPBcR_23168:HG2_PB_pbsv_7444:HG3_Ill_MetaSV_4688:HG2_Ill_tnscope_888:HG3_Ill_manta_1777:HG3_Ill_GATKHCSBGrefine_5152:HG2_PB_SVrefine2PBcRplusDovetail_9838:HG2_PB_SVrefine2PB10Xhap12_5408:HG2_PB_SVrefine2Falcon2Bionano_3628:HG2_PB_SVrefine2Falcon1plusDovetail_10576:HG2_Ill_scalpel_7406:HG2_Ill_manta_2177:HG2_Ill_SpiralSDKrefine_15286:HG2_Ill_SVrefine2DISCOVARplusDovetail_11623:HG2_Ill_MetaSV_4521:HG2_Ill_GATKHCSBGrefine_5209:HG2_10X_SVrefine210Xhap12_5341:HG3_Ill_Spiral_8226:HG2_Ill_breakscan11_1077;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5341:HG2_Ill_GATKHCSBGrefine_5209:HG2_Ill_MetaSV_4521:HG2_Ill_SVrefine2DISCOVARplusDovetail_11623:HG2_Ill_SpiralSDKrefine_15286:HG2_Ill_manta_2177:HG2_Ill_scalpel_7406:HG2_PB_SVrefine2Falcon1plusDovetail_10576:HG2_PB_SVrefine2Falcon2Bionano_3628:HG2_PB_SVrefine2PB10Xhap12_5408:HG2_PB_SVrefine2PBcRplusDovetail_9838:HG3_Ill_GATKHCSBGrefine_5152:HG3_Ill_manta_1777;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0900621;ClusterMaxSizeDiff=0.0900621;ClusterMaxEditDist=0.0900621;PBcalls=7;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-329;DistForward=-286;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=6:158876077-158876419;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3546.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:35:0|1:26:1:2:28:./.:0:0:0:0:0/1:23:25:0/1:20:11:.:.:.
chr6	159232336	HG2_PB_SVrefine2PBcRplusDovetail_9843	TGAAAGCAGACTGAATTTCACTGCTTCAGAATAGAGCTGAAACATCTAACTACCATTA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_550:HG3_PB_HySA_11442:HG2_PB_HySA_13814:HG3_PB_pbsv_7212:HG4_PB_pbsv_7461:HG2_PB_pbsv_7452:HG4_PB_assemblyticsfalcon_23334:HG4_Ill_svaba_9755:HG4_Ill_scalpel_7249:HG4_Ill_manta_1882:HG4_Ill_Krunchall_11146:HG4_Ill_GATKHCSBGrefine_5296:HG4_Ill_250bpfermikitraw_10491:HG4_Ill_150bpfermikitraw_10073:HG3_PB_assemblyticsfalcon_23778:HG3_PB_SVrefine2PBcRDovetail_3384:HG3_Ill_svaba_9738:HG3_Ill_scalpel_7521:HG3_Ill_manta_1780:HG3_Ill_Krunchall_10539:HG3_Ill_GATKHCSBGrefine_5163:HG3_Ill_250bpfermikitraw_10194:HG3_Ill_150bpfermikitraw_9923:HG2_PB_SVrefine2PBcRplusDovetail_9843:HG2_PB_SVrefine2Falcon2Bionano_3634:HG2_PB_SVrefine2Falcon1plusDovetail_10581:HG2_Ill_svaba_9658:HG2_Ill_manta_2181:HG2_Ill_SpiralSDKrefine_15290:HG2_Ill_SVrefine2DISCOVARplusDovetail_11626:HG2_Ill_GATKHCSBGrefine_5217:HG2_Ill_250bpfermikitraw_10492:HG2_Ill_150bpfermikitraw_9889:HG2_10X_SVrefine210Xhap12_5344:HG4_Ill_Spiral_630:HG3_Ill_Spiral_8231;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5344:HG2_Ill_150bpfermikitraw_9889:HG2_Ill_250bpfermikitraw_10492:HG2_Ill_GATKHCSBGrefine_5217:HG2_Ill_SVrefine2DISCOVARplusDovetail_11626:HG2_Ill_SpiralSDKrefine_15290:HG2_Ill_manta_2181:HG2_Ill_svaba_9658:HG2_PB_SVrefine2Falcon1plusDovetail_10581:HG2_PB_SVrefine2Falcon2Bionano_3634:HG2_PB_SVrefine2PBcRplusDovetail_9843:HG3_Ill_150bpfermikitraw_9923:HG3_Ill_250bpfermikitraw_10194:HG3_Ill_GATKHCSBGrefine_5163:HG3_Ill_Krunchall_10539:HG3_Ill_manta_1780:HG3_Ill_scalpel_7521:HG3_Ill_svaba_9738:HG3_PB_SVrefine2PBcRDovetail_3384:HG3_PB_assemblyticsfalcon_23778:HG4_Ill_150bpfermikitraw_10073:HG4_Ill_250bpfermikitraw_10491:HG4_Ill_GATKHCSBGrefine_5296:HG4_Ill_Krunchall_11146:HG4_Ill_manta_1882:HG4_Ill_scalpel_7249:HG4_Ill_svaba_9755:HG4_PB_assemblyticsfalcon_23334;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0521739;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.0530973;PBcalls=11;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=2;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=65;REFWIDENED=6:159232337-159232458;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3547.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:33:0|1:36:0:4:29:./.:0:0:0:0:0/1:33:21:./.:.:.:.:.:.
chr6	159348529	HG3_PB_SVrefine2PBcRDovetail_3385	TGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGGGGATCATGAGGTCAAGAGATTGAGATCATCCTGGCCAACATGGTGAAATCCTGTCTCTACTAAAAATACAAAATTAGCCAGGCATGGTGGCGGGCACGTTTAGTCCCAACTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGCACCACTGCACTCTAGCCTGGGTGACAGAGCAAGACTCTGTTTCAAAAAAAAAAAAGTTTCTAAACCTTTTAAAATGTGTGTAATATAGAATACATACAAAAAATACATTTAAATGCACAGAATAATGGATTATTATGAAGTGAACCCAAGGACAATGGCCTAATGACTTTAGAAATAAACACCGTCAGTATTCCCAAAGTCCCATACCTACGTGTTCATTGCCTAACCTTTTGAGAATTTCTTCTTCTTTTTTTTGTTTTCAACTTTTATTTTAGGTTCAGAGGTACATGTACAGGTTTGTTATGTAGGTAAATATCATGTCACTGGGGTGTGCTGTATAGATTATTTCATTACCCAGGTAATAAGCATGATGCCTGCTAGGTTGTTTTTCCATCCTCACCCTCTTCCCACTCTCCACCCTCAGGTGGGCCCCTGTGTGTATTGTTCTCCTCTTTGTGTTCACGTGTACTCAGTGTTTTGCTCACACTTATAAGTGAGAACATGCTGGATTTGGTTTTCTTTTCCTTTGTTAGTTTGCTTAGGATAATGGCCTCTAGCTCCATCCATGTTGCTGCAAAGGACATTATTTTGTTCTTTTTCATGGCTGTGTAGTGTTCCATGGTATATATGTACTATATATATATATTTTTTTTTACCATTTTTATCTTTTATACCACTTTTTTTTTTTTTTTTTTTTTGAGACGGAATCTCTCTCTGTCACCCAGGCTGGGGTGCAGTGGCATGATCTCAGCTCACTGCAACCTCCGTCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGTATACCATATTTTTACTGTACCTCTTATATGGTTAGATACACAAATACATTGTGTTACAGTTGCCTACAGTATTCAGTCCAGTAATGTGCAGTACAGGTTAGCAGCTCAGGAGCAAAGGGCTCTACCATAGACCCTTGGTGCACAGTAGGCGATACCATCTAGCTTTGTGTAAGCACACTCTGATATTCACATGATGATAAAATCACCTAATGAGGCATTTTTCAGAACATATTTCTATCATTAAGAGATTTGTGGCCAGGTGTGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5345:HG2_10X_allpass_1273:HG3_10X_allpass_1533:HG3_PB_pbsv_7213:HG2_PB_pbsv_7454:HG2_Ill_MetaSV_4523:HG3_Ill_MetaSV_4691:HG3_Ill_GATKHCSBGrefine_5165:HG2_Ill_tnscope_889:HG4_PB_SVrefine2Falcon1Dovetail_4522:HG3_PB_SVrefine2PBcRDovetail_3385:HG3_PB_SVrefine2Falcon1Dovetail_4473:HG2_PB_SVrefine2PB10Xhap12_5413:HG2_PB_SVrefine2Falcon2Bionano_3636:HG2_PB_SVrefine2Falcon1plusDovetail_10583;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5345:HG4_PB_SVrefine2Falcon1Dovetail_4522:HG3_PB_SVrefine2PBcRDovetail_3385:HG3_PB_SVrefine2Falcon1Dovetail_4473:HG2_PB_SVrefine2PB10Xhap12_5413:HG2_PB_SVrefine2Falcon2Bionano_3636:HG2_PB_SVrefine2Falcon1plusDovetail_10583;NumExactMatchSVs=7;ClusterMaxShiftDist=0.106538;ClusterMaxSizeDiff=0.106538;ClusterMaxEditDist=0.11798;PBcalls=8;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-1301;DistBack=2190;DistForward=-1087;DistMin=-1087;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=280;REFWIDENED=6:159348530-159350110;PctSeqSimilarity=0.9125;PctSizeSimilarity=0.9985;PctRecOverlap=0.8466;SizeDiff=-2;StartDistance=-198;EndDistance=-200;GTMatch=0;TruScore=91;MatchId=3548.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:45:34:0|1:40:4:1:16:./.:0:0:0:0:0/0:83:0:0/1:139:42:1627:.:.
chr6	159652109	HG2_PB_SVrefine2Falcon1plusDovetail_10584	TAAAAATTACAAATTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_551:HG4_Ill_Krunchall_11150:HG3_Ill_Krunchall_10542:HG2_Ill_Krunchall_10813:HG4_PB_assemblyticsfalcon_23336:HG3_PB_assemblyticsfalcon_23780:HG2_PB_assemblyticsfalcon_23941:HG2_PB_assemblyticsPBcR_23181:HG3_PB_pbsv_7214:HG2_PB_HySA_13816:HG2_PB_pbsv_7455:HG4_Ill_MetaSV_4723:HG3_PB_HySA_11443:HG3_Ill_MetaSV_4692:HG2_Ill_tnscope_890:HG4_PB_pbsv_7462:HG4_PB_SVrefine2PBcRDovetail_3679:HG4_PB_SVrefine2Falcon1Dovetail_4523:HG4_PB_HySA_11037:HG4_Ill_svaba_9759:HG4_Ill_scalpel_7252:HG4_Ill_manta_1883:HG4_Ill_SVrefine2DISCOVARDovetail_5539:HG4_Ill_GATKHCSBGrefine_5297:HG4_10X_allpass_1494:HG3_PB_SVrefine2PBcRDovetail_3386:HG3_PB_SVrefine2Falcon1Dovetail_4474:HG3_Ill_svaba_9742:HG3_Ill_scalpel_7524:HG3_Ill_manta_1781:HG3_Ill_SVrefine2DISCOVARDovetail_5716:HG3_Ill_GATKHCSBGrefine_5166:HG3_10X_allpass_1534:HG2_PB_SVrefine2PBcRplusDovetail_9844:HG2_PB_SVrefine2PB10Xhap12_5414:HG2_PB_SVrefine2Falcon2Bionano_3637:HG2_PB_SVrefine2Falcon1plusDovetail_10584:HG2_Ill_svaba_9662:HG2_Ill_scalpel_7420:HG2_Ill_manta_2182:HG2_Ill_SVrefine2DISCOVARplusDovetail_11630:HG2_Ill_MetaSV_4524:HG2_Ill_GATKHCSBGrefine_5218:HG2_10X_allpass_1274:HG2_10X_SVrefine210Xhap12_5346:HG4_Ill_Spiral_631:HG3_Ill_Spiral_8232;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5346:HG2_10X_allpass_1274:HG2_Ill_GATKHCSBGrefine_5218:HG2_Ill_MetaSV_4524:HG2_Ill_SVrefine2DISCOVARplusDovetail_11630:HG2_Ill_manta_2182:HG2_Ill_scalpel_7420:HG2_Ill_svaba_9662:HG2_PB_SVrefine2Falcon1plusDovetail_10584:HG2_PB_SVrefine2Falcon2Bionano_3637:HG2_PB_SVrefine2PB10Xhap12_5414:HG2_PB_SVrefine2PBcRplusDovetail_9844:HG3_10X_allpass_1534:HG3_Ill_GATKHCSBGrefine_5166:HG3_Ill_SVrefine2DISCOVARDovetail_5716:HG3_Ill_manta_1781:HG3_Ill_scalpel_7524:HG3_Ill_svaba_9742:HG3_PB_SVrefine2Falcon1Dovetail_4474:HG3_PB_SVrefine2PBcRDovetail_3386:HG4_10X_allpass_1494:HG4_Ill_GATKHCSBGrefine_5297:HG4_Ill_SVrefine2DISCOVARDovetail_5539:HG4_Ill_manta_1883:HG4_Ill_scalpel_7252:HG4_Ill_svaba_9759:HG4_PB_HySA_11037:HG4_PB_SVrefine2Falcon1Dovetail_4523:HG4_PB_SVrefine2PBcRDovetail_3679:HG4_PB_pbsv_7462;NumExactMatchSVs=30;ClusterMaxShiftDist=0.100977;ClusterMaxSizeDiff=0.100977;ClusterMaxEditDist=0.100977;PBcalls=18;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=97267;DistForward=14338;DistMin=14338;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=6:159652110-159652438;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3549.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:88:1/1:1:35:0:41:./.:0:0:0:0:1/1:0:43:./.:1:13:.:.:.
chr6	159666761	HG3_10X_allpass_1535	AGTCATTATGGTAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCTTGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTATAGGCGCCCACCACGACGCCCGGCTAATTTTTTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCAGGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1079:HG2_PB_assemblyticsPBcR_23182:HG4_PB_assemblyticsfalcon_23337:HG3_PB_assemblyticsfalcon_23781:HG2_PB_assemblyticsfalcon_23942:HG4_Ill_Krunchall_11151:HG3_Ill_Krunchall_10543:HG2_Ill_Krunchall_10814:HG4_Ill_Spiral_632:HG3_PB_HySA_11444:HG3_Ill_Spiral_8233:HG2_PB_HySA_13817:HG2_Ill_Spiral_552:HG3_PB_pbsv_7215:HG2_PB_pbsv_7456:HG4_PB_pbsv_7463:HG4_PB_HySA_11038:HG4_Ill_MetaSV_4724:HG3_Ill_MetaSV_4693:HG2_Ill_tnscope_891:HG2_Ill_MetaSV_4525:HG4_PB_SVrefine2PBcRDovetail_3680:HG4_PB_SVrefine2Falcon1Dovetail_4524:HG4_Ill_scalpel_7253:HG4_Ill_manta_1884:HG4_Ill_SVrefine2DISCOVARDovetail_5540:HG4_Ill_GATKHCSBGrefine_5298:HG4_10X_allpass_1495:HG3_PB_SVrefine2PBcRDovetail_3387:HG3_PB_SVrefine2Falcon1Dovetail_4475:HG3_Ill_scalpel_7525:HG3_Ill_manta_1782:HG3_Ill_SVrefine2DISCOVARDovetail_5717:HG3_Ill_GATKHCSBGrefine_5167:HG3_10X_allpass_1535:HG2_PB_SVrefine2PBcRplusDovetail_9845:HG2_PB_SVrefine2PB10Xhap12_5415:HG2_PB_SVrefine2Falcon2Bionano_3638:HG2_PB_SVrefine2Falcon1plusDovetail_10585:HG2_Ill_scalpel_7421:HG2_Ill_manta_2183:HG2_Ill_SpiralSDKrefine_15292:HG2_Ill_SVrefine2DISCOVARplusDovetail_11631:HG2_Ill_GATKHCSBGrefine_5219:HG2_10X_allpass_1275:HG2_10X_SVrefine210Xhap12_5347;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5347:HG2_10X_allpass_1275:HG2_Ill_GATKHCSBGrefine_5219:HG2_Ill_SVrefine2DISCOVARplusDovetail_11631:HG2_Ill_SpiralSDKrefine_15292:HG2_Ill_manta_2183:HG2_Ill_scalpel_7421:HG2_PB_SVrefine2Falcon1plusDovetail_10585:HG2_PB_SVrefine2Falcon2Bionano_3638:HG2_PB_SVrefine2PB10Xhap12_5415:HG2_PB_SVrefine2PBcRplusDovetail_9845:HG3_10X_allpass_1535:HG3_Ill_GATKHCSBGrefine_5167:HG3_Ill_SVrefine2DISCOVARDovetail_5717:HG3_Ill_manta_1782:HG3_Ill_scalpel_7525:HG3_PB_SVrefine2Falcon1Dovetail_4475:HG3_PB_SVrefine2PBcRDovetail_3387:HG4_10X_allpass_1495:HG4_Ill_GATKHCSBGrefine_5298:HG4_Ill_SVrefine2DISCOVARDovetail_5540:HG4_Ill_manta_1884:HG4_Ill_scalpel_7253:HG4_PB_SVrefine2Falcon1Dovetail_4524:HG4_PB_SVrefine2PBcRDovetail_3680;NumExactMatchSVs=25;ClusterMaxShiftDist=0.10443;ClusterMaxSizeDiff=0.10443;ClusterMaxEditDist=0.10443;PBcalls=18;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=14338;DistForward=22768;DistMin=14338;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=6:159666762-159667101;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3550.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:85:1/1:0:20:0:22:./.:0:0:0:0:1/1:0:48:./.:2:20:.:.:.
chr6	160072913	HG2_PB_SVrefine2PBcRplusDovetail_9848	GATATATGTATATATGTATACATATGTATATCTATACATATATCTATGTATGTATACATATGTATATCTATACATGTATGTATGTATACATATGTATATCTATACATGTATGTATGTATACATATGTATATCTATACATGTATGTATGTATACATATGTATATCTATACATGTATGTATGTATACATATGTATATCTATACATGTATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATACATATGTATATCTATACATGTATGTATGTATACATATGTATATCTATACATGTATGTATGTATGTATACATATGTATATCT	G	10	PASS	ClusterIDs=HG3_PB_pbsv_7219:HG2_PB_pbsv_7460:HG3_PB_SVrefine2PBcRDovetail_3390:HG3_PB_SVrefine2Falcon1Dovetail_4478:HG2_PB_SVrefine2PBcRplusDovetail_9848:HG2_PB_SVrefine2PB10Xhap12_5418:HG2_PB_SVrefine2Falcon2Bionano_3641:HG2_PB_SVrefine2Falcon1plusDovetail_10588;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10588:HG2_PB_SVrefine2Falcon2Bionano_3641:HG2_PB_SVrefine2PB10Xhap12_5418:HG2_PB_SVrefine2PBcRplusDovetail_9848:HG3_PB_SVrefine2Falcon1Dovetail_4478;NumExactMatchSVs=5;ClusterMaxShiftDist=0.241921;ClusterMaxSizeDiff=0.241921;ClusterMaxEditDist=0.241921;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-576;DistBack=26657;DistForward=-566;DistMin=-566;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=158;REFWIDENED=6:160072914-160073647;PctSeqSimilarity=0.8889;PctSizeSimilarity=0.9965;PctRecOverlap=0.8135;SizeDiff=-2;StartDistance=-106;EndDistance=-108;GTMatch=0;TruScore=89;MatchId=3551.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:42:./.:15:5:3:30:./.:0:0:0:0:0/1:34:9:./.:29:2:.:.:.
chr6	160086246	HG2_PB_SVrefine2PBcRplusDovetail_9849	GCGGTGGCTCATGCCTGTAATTCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGAGAAAACCCATCCCTACTAAAAATACAAAATTAGCCGGGTGTGGTGGCACATGCCTGTAACTACTCGGGAGGCTGAGGCAGGAGAATTGTTTGAACTCGGGGGGCAGAGGTTGTGGTGAGCCGAGATTGAGCCACTGCACTCCAGCCTGGGCAAAAAGTGAAACTCCATCTCAAAAAAAAAAAAAGAGTAACCTAAATTCTGAGTTCAATCAATTAAGTGTTACCACTCACTGAGGAGAAAGACTCAGAGATGAGCAGATTTGGGAACTGGCAGAATCCAGAGTTCACTTTGGAGCAAGCGAGTTTTGAATGCCTATTAAACACTCCAGTGGAGCAGTGAGATAGGGTGTATGAACTACGAAGTCCAAAGAGTGGAGGCTGCAGCTGGAACTGGAGTGGGGAAGAGTGTAAGTCAGTACTCTTTTGACTGCAAGAGACAAAAATTCAACTCAAGTAGCTTAAGCAAAATAAGTAACTAAACAAAAATTGAATACAATAATATTAGTGAACTTTCAGCTCACATAACCAGTAAACCCAAGGATGGGCTTCAGGCCCAGCTGGACCCAGAGACTCATATAATGCCATGGATGATGCCTCTCTCCATTGCTTGGTTCTTCCTTCCTCGATATACTGGATGAGGTGGCACCATCTCATAGGTCCTCTACACAGGAGTCCAGAGAAAGGGGAAAACACTTTCCCACAGCCCATATGCTGAGGCTTCAGGACAATTCTCATTGGCACAAATTGAGTCATAAGCCCATCTCTGAACTTATCATGCATTCAAAAAATAAAAGGAGAACATGACTAGTGTGGGTTGTGAGCCAGTGCAATGGGTCAAACTGGGGAAAGGAAGCCACAGAGCACAGAGATAAACAATCTTACCAACCTCTGATGAAGGGAAAAGTAGTTGCTCCCCAAAAGAATAAGTAGGGTACTTTATCAGACAGTGGGGATGGCTGCTAGATGATGAGTAACGTTAGTTATTGTAACAAGCAAATCCCAACATTTCTATGTCTGAACACATTAAAATGCTATTTCCTGCTCACATAATTTTTCTTTTTTGAGACAGGGTCTTGCTGTGTCACCCAGGCTGGAGGGCAGTGACATGATCTCAACTCACTGCAGCTTGGCTCTTCCTGGCTCAAGCCACACTCCCACCTCAGCCTCCTGAGTAGTCGGGACCACAGGCATGAGCCACCATGCCCAACCACTCACGTAATCTGCGTGTTCTTGATCGGGAAGCTTTCTTTGAAGCAGTGATTTGAGGAAACGGGTTTCTTCTCTTCTGTATCTGTGCCAGCTTCAACAAGTGGCTTCTAAATTTCTAACAATAAGCCAGGCATGGTGGCTTATGCCTGTAATACCAGCACTTTGGGAGGCTAAGGCGGGCAGATTGCTTGAGCTGGGGAGTTCGAGACCAGCCTGGGAAACTTGGCAAAACCCCATCTGTATGTAAAAAATAAGACAAAAATAAAATAAAAAGTTAAAAACAAACAAAAAAATAAAATAGTAGCACTCACTCCTCTCAAGCCAGCAGAAAGGGGTGAAGAAGATTAAGAAGACACACCCATTTCTTCACCTCTGGTCACATACAGAACTAGCCATGCGGCCCCACTATGTGAAAGGAAGTCTTGCAAAAGTCATACCTGGCTGGGCAACAGCTCCCAGCAGCCACTCTGCACAATGGGAGGGAAACCTAAGCCTTTGGTGGACAGCAGCCATGTCTCCCACAGGTGCTGAGCAGACAAGGAGCAGATGTCCATCTCTAGCATCCATCCAGCAGTCCTGCACAGGACGCAGAGTGATCAGCCTGGGCTTACTCCGTGCTTTTCTGGGCTGGTCTCTCTCACAGTGAAGCTCCATGTTTATGATTCTTGGCCCTAGATGTGTATTAGAATCACTTGTTGCCGGGCGTAGTGGCTCATGCCTGTAATCCCAACACTTGGGAGGCTGAGATGGGAGGATCACTTGAGCTGAGTTCAAGACCAGCCTGGGCAACACAGATAAACCTCATCTCTACTAACATTAAAAAAAAAAAAAAAATCAGCTGGGTTTGGTAGCACATCCCTGTAGTCCCACCTACTTGGGAGGGGTGGGCTGAGATGGGAGGATAACTTGAGCCCAAGAGGTTAAGGCTGCAGTGAGCCCTGATTGTGCCACTGCACTCCAGCGTGGGTGACAGAGCAAGGCCCATATCCATGTTCAGACTGATTGAATCAGTCTTTCATGGGTAGAGCCTGGCATCATTATTTGGGTAAAACTCCTTTGAAGTGGCTCTAATGTGTACCCAGGAATGAGAACCATTTGGCTTAAATAAAAGAAAGACATTTGGCTGGGCA	G	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4695:HG3_10X_allpass_1537:HG2_10X_allpass_1276:HG3_PB_HySA_11453:HG3_PB_pbsv_7220:HG2_PB_HySA_13828:HG2_Ill_MetaSV_4527:HG2_Ill_tnscope_892:HG4_PB_SVrefine2Falcon1Dovetail_4529:HG3_PB_SVrefine2PBcRDovetail_3391:HG3_PB_SVrefine2Falcon1Dovetail_4479:HG2_PB_pbsv_7461:HG2_PB_SVrefine2PBcRplusDovetail_9849:HG2_PB_SVrefine2PB10Xhap12_5419:HG2_PB_SVrefine2Falcon2Bionano_3642:HG2_PB_SVrefine2Falcon1plusDovetail_10589:HG2_10X_SVrefine210Xhap12_5351;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5351:HG2_PB_SVrefine2Falcon1plusDovetail_10589:HG2_PB_SVrefine2Falcon2Bionano_3642:HG2_PB_SVrefine2PB10Xhap12_5419:HG2_PB_SVrefine2PBcRplusDovetail_9849:HG2_PB_pbsv_7461:HG3_PB_SVrefine2Falcon1Dovetail_4479:HG3_PB_SVrefine2PBcRDovetail_3391:HG4_PB_SVrefine2Falcon1Dovetail_4529;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0579287;ClusterMaxSizeDiff=0.0579287;ClusterMaxEditDist=0.0579287;PBcalls=11;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-2432;DistBack=1676;DistForward=-2415;DistMin=-2415;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=286;REFWIDENED=6:160086247-160088964;PctSeqSimilarity=0.9919;PctSizeSimilarity=1;PctRecOverlap=0.9955;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=99;MatchId=3552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:46:0|1:35:0:0:28:./.:0:0:0:0:0/1:59:18:0/1:191:68:2525:.:.
chr6	161684136	HG4_Ill_GATKHC_12574	CGGTGGGCGGGGTGTTTCTCACACCTGCCTGCCCCACCCCACCCCACCACCAAGATTCCCAGCCACCTTGGATGCTTAAGGAAGGTGCATTTCCCCCGGTGAG	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_10845:HG4_PB_pbsv_7486:HG4_PB_HySA_11071:HG2_PB_HySA_13858:HG4_PB_assemblyticsfalcon_23367:HG3_PB_assemblyticsfalcon_23817:HG4_PB_SVrefine2PBcRDovetail_3695:HG4_PB_SVrefine2Falcon1Dovetail_4542:HG4_Ill_svaba_9773:HG4_Ill_scalpel_7263:HG4_Ill_manta_1890:HG4_Ill_SVrefine2DISCOVARDovetail_5560:HG4_Ill_MetaSV_4733:HG4_Ill_GATKHC_12574:HG4_Ill_GATKHCSBGrefine_5309:HG4_Ill_Cortex_3304:HG4_CG_vcfBeta_5004:HG4_10X_allpass_1496:HG3_PB_SVrefine2Falcon1Dovetail_4490:HG3_Ill_svaba_9772:HG3_Ill_scalpel_7542:HG3_Ill_manta_1788:HG3_Ill_MetaSV_4705:HG3_Ill_GATKHC_12506:HG3_Ill_GATKHCSBGrefine_5180:HG3_Ill_Cortex_3325:HG3_CG_vcfBeta_4268:HG3_10X_allpass_1540:HG2_PB_assemblyticsfalcon_23976:HG2_PB_assemblyticsPBcR_23222:HG2_PB_SVrefine2PBcRplusDovetail_9865:HG2_PB_SVrefine2PB10Xhap12_5439:HG2_PB_SVrefine2Falcon2Bionano_3656:HG2_PB_SVrefine2Falcon1plusDovetail_10607:HG2_Ill_svaba_9690:HG2_Ill_scalpel_7434:HG2_Ill_manta_2191:HG2_Ill_SpiralSDKrefine_15309:HG2_Ill_SVrefine2DISCOVARplusDovetail_11648:HG2_Ill_MetaSV_4536:HG2_Ill_GATKHC_12539:HG2_Ill_GATKHCSBGrefine_5233:HG2_Ill_Cortex_8072:HG2_CG_vcfBeta_4465:HG2_10X_allpass_1277:HG2_10X_SVrefine210Xhap12_5374:HG4_Ill_Krunchall_11166:HG3_PB_pbsv_7253:HG3_Ill_Krunchall_10570:HG2_PB_pbsv_7488:HG2_Ill_breakscan11_1083;NumClusterSVs=51;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5374:HG2_10X_allpass_1277:HG2_CG_vcfBeta_4465:HG2_Ill_Cortex_8072:HG2_Ill_GATKHCSBGrefine_5233:HG2_Ill_GATKHC_12539:HG2_Ill_MetaSV_4536:HG2_Ill_SVrefine2DISCOVARplusDovetail_11648:HG2_Ill_SpiralSDKrefine_15309:HG2_Ill_manta_2191:HG2_Ill_scalpel_7434:HG2_Ill_svaba_9690:HG2_PB_SVrefine2Falcon1plusDovetail_10607:HG2_PB_SVrefine2Falcon2Bionano_3656:HG2_PB_SVrefine2PB10Xhap12_5439:HG2_PB_SVrefine2PBcRplusDovetail_9865:HG2_PB_assemblyticsPBcR_23222:HG2_PB_assemblyticsfalcon_23976:HG3_10X_allpass_1540:HG3_CG_vcfBeta_4268:HG3_Ill_Cortex_3325:HG3_Ill_GATKHCSBGrefine_5180:HG3_Ill_GATKHC_12506:HG3_Ill_MetaSV_4705:HG3_Ill_manta_1788:HG3_Ill_scalpel_7542:HG3_Ill_svaba_9772:HG3_PB_SVrefine2Falcon1Dovetail_4490:HG4_10X_allpass_1496:HG4_CG_vcfBeta_5004:HG4_Ill_Cortex_3304:HG4_Ill_GATKHCSBGrefine_5309:HG4_Ill_GATKHC_12574:HG4_Ill_MetaSV_4733:HG4_Ill_SVrefine2DISCOVARDovetail_5560:HG4_Ill_manta_1890:HG4_Ill_scalpel_7263:HG4_Ill_svaba_9773:HG4_PB_SVrefine2Falcon1Dovetail_4542:HG4_PB_SVrefine2PBcRDovetail_3695;NumExactMatchSVs=40;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0487805;PBcalls=16;Illcalls=28;TenXcalls=4;CGcalls=3;PBexactcalls=9;Illexactcalls=24;TenXexactcalls=4;CGexactcalls=3;HG2count=22;HG3count=13;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-102;DistBack=34442;DistForward=1873;DistMin=1873;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:161684137-161684239;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3554.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:1/1:2:40:0:26:./.:0:0:0:0:1/1:0:50:./.:.:.:.:.:.
chr6	162316498	HG2_PB_SVrefine2Falcon1plusDovetail_10613	ACCCCAGTGAGGCTTCTGAGATTCAGGAGTACGCCCACCCCACCTGCCGTTATGCCCCCCAGTGAGGCTTCTGAGATTCAGGAGCACGCCCACCCCACCTGCCGTTATACACCCCAGTGAGGCTTCTGAGATTCAGGAGCACGCCCACCCCACCTGCTGTTATGCTCCCCAGTGAGGCTTCTGAGATTCAGGAGCACGCCCACCCCTCCTGCTGTTATGCC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_553:HG4_Ill_Krunchall_11173:HG2_Ill_Krunchall_10851:HG2_PB_HySA_13875:HG2_PB_SVrefine2PB10Xhap12_5446:HG4_PB_pbsv_7496:HG2_PB_pbsv_7496:HG4_PB_SVrefine2PBcRDovetail_3699:HG4_PB_SVrefine2Falcon1Dovetail_4547:HG4_Ill_manta_1893:HG4_Ill_MetaSV_4738:HG4_Ill_GATKHCSBGrefine_5315:HG4_10X_allpass_1498:HG3_PB_SVrefine2Falcon1Dovetail_4495:HG2_PB_SVrefine2PBcRplusDovetail_9870:HG2_PB_SVrefine2PB10Xhap12_5445:HG2_PB_SVrefine2Falcon1plusDovetail_10613:HG2_Ill_SpiralSDKrefine_15315:HG2_Ill_SVrefine2DISCOVARplusDovetail_11653:HG2_Ill_MetaSV_4538:HG2_Ill_GATKHCSBGrefine_5240:HG2_10X_allpass_1278:HG2_10X_SVrefine210Xhap12_5384:HG4_Ill_Spiral_633:HG2_Ill_breakscan11_1084;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5384:HG2_10X_allpass_1278:HG2_Ill_GATKHCSBGrefine_5240:HG2_Ill_MetaSV_4538:HG2_Ill_SVrefine2DISCOVARplusDovetail_11653:HG2_Ill_SpiralSDKrefine_15315:HG2_PB_SVrefine2Falcon1plusDovetail_10613:HG2_PB_SVrefine2PB10Xhap12_5445:HG2_PB_SVrefine2PBcRplusDovetail_9870:HG3_PB_SVrefine2Falcon1Dovetail_4495:HG4_10X_allpass_1498:HG4_Ill_GATKHCSBGrefine_5315:HG4_Ill_MetaSV_4738:HG4_Ill_manta_1893:HG4_PB_SVrefine2Falcon1Dovetail_4547:HG4_PB_SVrefine2PBcRDovetail_3699;NumExactMatchSVs=16;ClusterMaxShiftDist=0.187354;ClusterMaxSizeDiff=0.187354;ClusterMaxEditDist=0.187354;PBcalls=10;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-220;DistBack=8759;DistForward=-168;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=54;REFWIDENED=6:162316499-162316772;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:41:0|1:19:4:0:36:./.:0:0:0:0:0/1:20:18:./.:.:.:.:.:.
chr6	162748569	HG2_PB_SVrefine2PB10Xhap12_5450	GTTTCAATGTTAGGTTTTGAAAATGTTAGGTCCTTGACAATGGTTTTCTCTACAGTTTCAATGTTAGGTTTTGAAAATGTTAGGTCCTTGACAATGGTCTTCTCTACAGT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_7502:HG3_Ill_Krunchall_10580:HG3_10X_allpass_1541:HG2_PB_assemblyticsPBcR_23237:HG2_PB_SVrefine2PBcRplusDovetail_9874:HG2_PB_SVrefine2PB10Xhap12_5450:HG2_PB_HySA_13882:HG2_Ill_SVrefine2DISCOVARplusDovetail_11656:HG2_Ill_Krunchall_10856:HG2_Ill_250bpfermikitraw_10535:HG3_PB_pbsv_7262;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10535:HG2_Ill_Krunchall_10856:HG2_Ill_SVrefine2DISCOVARplusDovetail_11656:HG2_PB_HySA_13882:HG2_PB_SVrefine2PB10Xhap12_5450:HG2_PB_SVrefine2PBcRplusDovetail_9874:HG2_PB_assemblyticsPBcR_23237:HG3_10X_allpass_1541:HG3_Ill_Krunchall_10580;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00913242;ClusterMaxSizeDiff=0.00913242;ClusterMaxEditDist=0.0273973;PBcalls=6;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-109;DistBack=2397;DistForward=-56;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=162;REFWIDENED=6:162748480-162748750;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3557.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:36:0|1:29:0:0:34:./.:0:0:0:0:0/1:34:21:./.:.:.:.:.:.
chr6	162879159	HG2_PB_pbsv_7503	ACCTGTAATCCCCAGCTACTTAGGAGGCTGAGACAGGGAGAATTGCTTGAACCTGGGAGGTAGAGGTTGCAGTGAGCCAAGATCGCTCCACTGCACTCCAGCCTGGGTGATAGAGTGAGACTCTATCTCAAAAAAAAAAAAAAAAAAAAATTACCTGGGTGTGGTGGCACGTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5388:HG3_PB_pbsv_7263:HG3_PB_HySA_11486:HG4_PB_SVrefine2Falcon1Dovetail_4552:HG3_Ill_scalpel_7558:HG3_Ill_manta_1792:HG3_Ill_MetaSV_4707:HG3_Ill_GATKHC_12524:HG3_Ill_GATKHCSBGrefine_5186:HG2_PB_pbsv_7503:HG2_Ill_scalpel_7444:HG2_Ill_MetaSV_4540:HG2_Ill_GATKHCSBGrefine_5245:HG2_10X_allpass_1280:HG2_10X_SVrefine210Xhap12_5389:HG4_PB_assemblyticsfalcon_23384:HG2_PB_HySA_13884:HG3_PB_SVrefine2PBcRDovetail_3407:HG3_Ill_SVrefine2DISCOVARDovetail_5749:HG2_PB_SVrefine2PBcRplusDovetail_9875:HG2_PB_SVrefine2Falcon2Bionano_3664:HG2_PB_SVrefine2Falcon1plusDovetail_10617:HG2_Ill_SVrefine2DISCOVARplusDovetail_11658;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5389:HG2_10X_allpass_1280:HG2_Ill_GATKHCSBGrefine_5245:HG2_Ill_MetaSV_4540:HG2_Ill_scalpel_7444:HG2_PB_pbsv_7503:HG3_Ill_GATKHCSBGrefine_5186:HG3_Ill_GATKHC_12524:HG3_Ill_MetaSV_4707:HG3_Ill_manta_1792:HG3_Ill_scalpel_7558:HG4_PB_SVrefine2Falcon1Dovetail_4552;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0115607;ClusterMaxSizeDiff=0.0115607;ClusterMaxEditDist=0.0463768;PBcalls=10;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-172;DistBack=7775;DistForward=-163;DistMin=-163;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=173;REFWIDENED=6:162879132-162879476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:0|1:22:0:2:22:./.:0:0:0:0:0/1:20:30:./.:.:.:.:.:.
chr6	162893501	HG2_10X_SVrefine210Xhap12_5390	TTTATTTTATTTTATTTTATTTTATTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCCCCAAACTTTTATTT	ATATATATA	20	PASS	ClusterIDs=HG2_Ill_tnscope_893:HG4_PB_pbsv_7501:HG2_PB_HySA_13885:HG4_PB_HySA_11090:HG3_PB_assemblyticsfalcon_23829:HG4_Ill_SVrefine2DISCOVARDovetail_5569:HG2_PB_assemblyticsPBcR_23240:HG2_PB_SVrefine2PBcRplusDovetail_9876:HG2_PB_SVrefine2PB10Xhap12_5452:HG2_PB_PB10Xdip_24848:HG2_10X_SVrefine210Xhap12_5390:HG2_PB_SVrefine2Falcon1plusDovetail_10618:HG4_PB_SVrefine2PBcRDovetail_3703:HG2_Ill_Spiral_554:HG4_10X_allpass_1500:HG4_Ill_MetaSV_4741:HG2_Ill_MetaSV_4541:HG2_PB_assemblyticsfalcon_23996:HG4_PB_SVrefine2Falcon1Dovetail_4553:HG4_PB_assemblyticsfalcon_23386:HG2_PB_pbsv_7504;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5390:HG2_PB_PB10Xdip_24848:HG2_PB_SVrefine2PB10Xhap12_5452:HG2_PB_SVrefine2PBcRplusDovetail_9876:HG2_PB_assemblyticsPBcR_23240;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0974889;ClusterMaxSizeDiff=0.0974889;ClusterMaxEditDist=0.100443;PBcalls=14;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-327;DistBack=-609;DistForward=-333;DistMin=-609;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:162893501-162893836;PctSeqSimilarity=0.9655;PctSizeSimilarity=1;PctRecOverlap=0.9762;SizeDiff=0;StartDistance=-3;EndDistance=5;GTMatch=0;TruScore=98;MatchId=3559.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:23:0|1:24:2:3:21:./.:0:0:0:0:0/1:43:16:0/1:25:8:.:.:.
chr6	163743959	HG2_Ill_150bpfermikitraw_9939	GTCTGACTTAGGCAGGAGCGCTGGGCTATGCTCTCCTGTCTGATTTAGGCAGGGCGCTGGGCTTTGCCCTCATC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5396:HG2_PB_assemblyticsfalcon_24006:HG4_PB_pbsv_7509:HG3_PB_HySA_11498:HG2_Ill_Spiral_555:HG2_PB_pbsv_7509:HG4_PB_HySA_11102:HG2_PB_HySA_13896:HG4_Ill_svaba_9802:HG4_Ill_scalpel_7286:HG4_Ill_manta_1895:HG4_Ill_Krunchall_11190:HG4_Ill_GATKHC_12612:HG4_Ill_GATKHCSBGrefine_5327:HG4_Ill_Cortex_3306:HG4_Ill_250bpfermikitraw_10539:HG4_Ill_150bpfermikitraw_10115:HG3_PB_pbsv_7266:HG3_PB_assemblyticsfalcon_23838:HG3_Ill_svaba_9792:HG3_Ill_scalpel_7564:HG3_Ill_Krunchall_10588:HG3_Ill_GATKHC_12532:HG3_Ill_GATKHCSBGrefine_5190:HG3_Ill_Cortex_3328:HG3_Ill_250bpfermikitraw_10250:HG3_Ill_150bpfermikitraw_9973:HG2_PB_assemblyticsPBcR_23252:HG2_Ill_svaba_9712:HG2_Ill_scalpel_7449:HG2_Ill_manta_2195:HG2_Ill_Krunchall_10864:HG2_Ill_GATKHC_12568:HG2_Ill_GATKHCSBGrefine_5249:HG2_Ill_Cortex_8078:HG2_Ill_250bpfermikitraw_10549:HG2_Ill_150bpfermikitraw_9939:HG4_PB_SVrefine2Falcon1Dovetail_4556:HG4_Ill_SVrefine2DISCOVARDovetail_5574:HG2_Ill_SVrefine2DISCOVARplusDovetail_11662;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9939:HG2_Ill_250bpfermikitraw_10549:HG2_Ill_Cortex_8078:HG2_Ill_GATKHCSBGrefine_5249:HG2_Ill_GATKHC_12568:HG2_Ill_Krunchall_10864:HG2_Ill_manta_2195:HG2_Ill_scalpel_7449:HG2_Ill_svaba_9712:HG2_PB_assemblyticsPBcR_23252:HG3_Ill_150bpfermikitraw_9973:HG3_Ill_250bpfermikitraw_10250:HG3_Ill_Cortex_3328:HG3_Ill_GATKHCSBGrefine_5190:HG3_Ill_GATKHC_12532:HG3_Ill_Krunchall_10588:HG3_Ill_scalpel_7564:HG3_Ill_svaba_9792:HG3_PB_assemblyticsfalcon_23838:HG3_PB_pbsv_7266:HG4_Ill_150bpfermikitraw_10115:HG4_Ill_250bpfermikitraw_10539:HG4_Ill_Cortex_3306:HG4_Ill_GATKHCSBGrefine_5327:HG4_Ill_GATKHC_12612:HG4_Ill_Krunchall_11190:HG4_Ill_manta_1895:HG4_Ill_scalpel_7286:HG4_Ill_svaba_9802;NumExactMatchSVs=29;ClusterMaxShiftDist=0.027027;ClusterMaxSizeDiff=0.027027;ClusterMaxEditDist=0.136054;PBcalls=10;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-73;DistBack=1555;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=157;REFWIDENED=6:163743906-163744135;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:1:21:0:18:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr6	163747936	HG4_PB_SVrefine2Falcon1Dovetail_4557	TCCCCAGAAGTGAGGTGATATTGTTTGGAGATTTGTCCCCACCCAATCTTATGTTGAGACATAACCCCCAGAAGTGAGGTGATATTGTTTGGAGATTTGTCCCCACCCAATCTTATGTTGAGATATAAC	T	20	PASS	ClusterIDs=HG2_10X_allpass_1281:HG3_PB_pbsv_7267:HG4_Ill_GATKHCSBGrefine_5328:HG4_PB_pbsv_7510:HG2_PB_pbsv_7510:HG4_PB_SVrefine2Falcon1Dovetail_4557:HG4_Ill_250bpfermikitraw_10540:HG3_PB_SVrefine2PBcRDovetail_3409:HG3_PB_SVrefine2Falcon1Dovetail_4500:HG3_Ill_SVrefine2DISCOVARDovetail_5753:HG3_Ill_GATKHCSBGrefine_5191:HG3_Ill_250bpfermikitraw_10251:HG3_Ill_150bpfermikitraw_9974:HG2_PB_SVrefine2PBcRplusDovetail_9878:HG2_PB_SVrefine2PB10Xhap12_5455:HG2_PB_SVrefine2Falcon2Bionano_3666:HG2_PB_SVrefine2Falcon1plusDovetail_10620;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_1281:HG4_PB_SVrefine2Falcon1Dovetail_4557:HG4_Ill_250bpfermikitraw_10540:HG3_PB_SVrefine2PBcRDovetail_3409:HG3_PB_SVrefine2Falcon1Dovetail_4500:HG3_Ill_SVrefine2DISCOVARDovetail_5753:HG3_Ill_GATKHCSBGrefine_5191:HG3_Ill_250bpfermikitraw_10251:HG3_Ill_150bpfermikitraw_9974:HG2_PB_SVrefine2PBcRplusDovetail_9878:HG2_PB_SVrefine2PB10Xhap12_5455:HG2_PB_SVrefine2Falcon2Bionano_3666:HG2_PB_SVrefine2Falcon1plusDovetail_10620;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0156863;ClusterMaxSizeDiff=0.015625;ClusterMaxEditDist=0.0235294;PBcalls=10;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-128;DistBack=-2364;DistForward=-128;DistMin=-2364;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=134;REFWIDENED=6:163747937-163748198;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3562.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:25:./.:16:11:1:12:./.:0:0:0:0:0/1:14:10:./.:.:.:.:1291:.
chr6	164014774	HG2_PB_SVrefine2Falcon1plusDovetail_10623	TAAAGAAAATAATGGGCCGGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCCTGAGGTCAGGAGATTGAGACCTTCCTGGCTAACACGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCACGCCACTGCACTCCAGTCTGGGCGACTGAGCAAGACTCCGTCTCAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_7270:HG2_PB_pbsv_7513:HG3_Ill_GATKHCSBGrefine_5194:HG3_PB_HySA_11503:HG3_Ill_scalpel_7566:HG3_PB_SVrefine2PBcRDovetail_3412:HG3_Ill_SVrefine2DISCOVARDovetail_5755:HG2_PB_SVrefine2Falcon2Bionano_3669:HG2_PB_SVrefine2Falcon1plusDovetail_10623:HG2_Ill_SVrefine2DISCOVARplusDovetail_11664:HG2_10X_SVrefine210Xhap12_5397;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5397:HG2_Ill_SVrefine2DISCOVARplusDovetail_11664:HG2_PB_SVrefine2Falcon1plusDovetail_10623:HG2_PB_SVrefine2Falcon2Bionano_3669:HG3_Ill_SVrefine2DISCOVARDovetail_5755:HG3_PB_SVrefine2PBcRDovetail_3412;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00993378;ClusterMaxSizeDiff=0.00988468;ClusterMaxEditDist=0.0496689;PBcalls=6;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-303;DistBack=114242;DistForward=-271;DistMin=-271;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=316;REFWIDENED=6:164014775-164015393;PctSeqSimilarity=0.9617;PctSizeSimilarity=0.9967;PctRecOverlap=0.4868;SizeDiff=1;StartDistance=-156;EndDistance=-155;GTMatch=0;TruScore=81;MatchId=3563.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:28:0|1:33:8:2:18:./.:0:0:0:0:0/0:44:1:0/0:27:2:.:.:.
chr6	164032675	HG2_Ill_150bpfermikitraw_9942	CGGGTGCAGGTGGACTATGGATGCAGGTGGGCCTCAGGTGTGGGGAGACTACGGGTGCAGGTGGACTAT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9942:HG4_PB_HySA_11104:HG4_Ill_GATKHC_12615:HG4_Ill_GATKHCSBGrefine_5329:HG2_Ill_GATKHC_12572:HG2_Ill_GATKHCSBGrefine_5251:HG4_PB_pbsv_7512:HG2_PB_pbsv_7514:HG4_Ill_svaba_9805:HG4_Ill_250bpfermikitraw_10543:HG4_Ill_150bpfermikitraw_10117:HG2_Ill_svaba_9716;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9942:HG4_Ill_svaba_9805:HG4_Ill_250bpfermikitraw_10543:HG4_Ill_150bpfermikitraw_10117:HG2_Ill_svaba_9716;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0895522;ClusterMaxSizeDiff=0.0895522;ClusterMaxEditDist=0.106061;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-68;DistBack=7802;DistForward=-27;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=420;REFWIDENED=6:164032676-164033163;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3564.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:20:./.:15:7:1:10:./.:0:0:0:0:0/1:6:5:./.:.:.:.:.:.
chr6	164034953	HG4_Ill_GATKHCSBGrefine_5330	CCATAATCCCTCAGTGTTCCCATAATCCCTGAGTGTTTTCATAACCCCTTAGAGTTCA	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_9943:HG4_PB_pbsv_7513:HG3_PB_HySA_11505:HG3_PB_HySA_11504:HG3_PB_pbsv_7271:HG2_PB_pbsv_7515:HG2_PB_HySA_13909:HG2_PB_assemblyticsfalcon_24013:HG4_PB_assemblyticsfalcon_23395:HG4_Ill_svaba_9806:HG4_Ill_manta_1896:HG4_Ill_Krunchall_11192:HG4_Ill_GATKHC_12616:HG4_Ill_GATKHCSBGrefine_5330:HG4_Ill_250bpfermikitraw_10544:HG4_Ill_150bpfermikitraw_10118:HG3_PB_assemblyticsfalcon_23840:HG3_Ill_svaba_9793:HG3_Ill_scalpel_7567:HG3_Ill_manta_1793:HG3_Ill_Krunchall_10590:HG3_Ill_GATKHC_12535:HG3_Ill_GATKHCSBGrefine_5195:HG3_Ill_250bpfermikitraw_10254:HG3_Ill_150bpfermikitraw_9977:HG2_PB_assemblyticsPBcR_23258:HG2_Ill_svaba_9717:HG2_Ill_manta_2197:HG2_Ill_SpiralSDKrefine_15328:HG2_Ill_Krunchall_10867:HG2_Ill_GATKHC_12573:HG2_Ill_GATKHCSBGrefine_5252:HG2_Ill_250bpfermikitraw_10553;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9943:HG4_PB_assemblyticsfalcon_23395:HG4_Ill_svaba_9806:HG4_Ill_manta_1896:HG4_Ill_Krunchall_11192:HG4_Ill_GATKHC_12616:HG4_Ill_GATKHCSBGrefine_5330:HG4_Ill_250bpfermikitraw_10544:HG4_Ill_150bpfermikitraw_10118:HG3_PB_assemblyticsfalcon_23840:HG3_Ill_svaba_9793:HG3_Ill_scalpel_7567:HG3_Ill_manta_1793:HG3_Ill_Krunchall_10590:HG3_Ill_GATKHC_12535:HG3_Ill_GATKHCSBGrefine_5195:HG3_Ill_250bpfermikitraw_10254:HG3_Ill_150bpfermikitraw_9977:HG2_PB_assemblyticsPBcR_23258:HG2_Ill_svaba_9717:HG2_Ill_manta_2197:HG2_Ill_SpiralSDKrefine_15328:HG2_Ill_Krunchall_10867:HG2_Ill_GATKHC_12573:HG2_Ill_GATKHCSBGrefine_5252:HG2_Ill_250bpfermikitraw_10553;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0521739;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.0707965;PBcalls=10;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-57;DistBack=2164;DistForward=22149;DistMin=2164;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=6:164034952-164035041;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:23:1|0:5:20:10:2:./.:0:0:0:0:0/1:21:24:./.:.:.:.:.:.
chr6	164250807	HG2_Ill_breakscan11_1086	CTGGTAACAGTTCATCCCGGTAATAAGAAATTGGACTCTGGTTTTGCAAAAGAACAACCAGGAAACTGGTTGAGTGTCCAGCAGGGTCAGTGTCTTAAATATGGCATTA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_7273:HG4_PB_pbsv_7515:HG4_PB_assemblyticsfalcon_23398:HG4_PB_SVrefine2PBcRDovetail_3707:HG4_PB_SVrefine2Falcon1Dovetail_4561:HG4_Ill_svaba_9809:HG4_Ill_scalpel_7292:HG4_Ill_manta_1897:HG4_Ill_MetaSV_4743:HG4_Ill_GATKHC_12622:HG4_Ill_GATKHCSBGrefine_5332:HG4_Ill_Cortex_3308:HG4_CG_vcfBeta_5019:HG4_10X_allpass_1501:HG3_Ill_svaba_9796:HG3_Ill_scalpel_7571:HG3_Ill_manta_1794:HG3_Ill_MetaSV_4711:HG3_Ill_GATKHC_12542:HG3_Ill_GATKHCSBGrefine_5196:HG3_Ill_Cortex_3331:HG3_CG_vcfBeta_4279:HG3_10X_allpass_1542:HG2_PB_pbsv_7517:HG2_PB_assemblyticsPBcR_23262:HG2_PB_SVrefine2PBcRplusDovetail_9882:HG2_PB_SVrefine2PB10Xhap12_5457:HG2_Ill_svaba_9720:HG2_Ill_scalpel_7453:HG2_Ill_manta_2198:HG2_Ill_breakscan11_1086:HG2_Ill_SpiralSDKrefine_15331:HG2_Ill_SVrefine2DISCOVARplusDovetail_11665:HG2_Ill_MetaSV_4542:HG2_Ill_GATKHC_12578:HG2_Ill_GATKHCSBGrefine_5253:HG2_Ill_Cortex_8083:HG2_CG_vcfBeta_4479:HG2_10X_allpass_1282:HG2_10X_SVrefine210Xhap12_5399:HG4_Ill_Krunchall_11197:HG3_Ill_Krunchall_10595:HG2_Ill_Krunchall_10870;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5399:HG2_10X_allpass_1282:HG2_CG_vcfBeta_4479:HG2_Ill_Cortex_8083:HG2_Ill_GATKHCSBGrefine_5253:HG2_Ill_GATKHC_12578:HG2_Ill_MetaSV_4542:HG2_Ill_SVrefine2DISCOVARplusDovetail_11665:HG2_Ill_SpiralSDKrefine_15331:HG2_Ill_breakscan11_1086:HG2_Ill_manta_2198:HG2_Ill_scalpel_7453:HG2_Ill_svaba_9720:HG2_PB_SVrefine2PB10Xhap12_5457:HG2_PB_SVrefine2PBcRplusDovetail_9882:HG2_PB_assemblyticsPBcR_23262:HG2_PB_pbsv_7517:HG3_10X_allpass_1542:HG3_CG_vcfBeta_4279:HG3_Ill_Cortex_3331:HG3_Ill_GATKHCSBGrefine_5196:HG3_Ill_GATKHC_12542:HG3_Ill_MetaSV_4711:HG3_Ill_manta_1794:HG3_Ill_scalpel_7571:HG3_Ill_svaba_9796:HG4_10X_allpass_1501:HG4_CG_vcfBeta_5019:HG4_Ill_Cortex_3308:HG4_Ill_GATKHCSBGrefine_5332:HG4_Ill_GATKHC_12622:HG4_Ill_MetaSV_4743:HG4_Ill_manta_1897:HG4_Ill_scalpel_7292:HG4_Ill_svaba_9809:HG4_PB_SVrefine2Falcon1Dovetail_4561:HG4_PB_SVrefine2PBcRDovetail_3707:HG4_PB_assemblyticsfalcon_23398:HG4_PB_pbsv_7515;NumExactMatchSVs=39;ClusterMaxShiftDist=0.0373832;ClusterMaxSizeDiff=0.0373832;ClusterMaxEditDist=0.0373832;PBcalls=9;Illcalls=27;TenXcalls=4;CGcalls=3;PBexactcalls=8;Illexactcalls=24;TenXexactcalls=4;CGexactcalls=3;HG2count=18;HG3count=11;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-108;DistBack=29619;DistForward=25087;DistMin=25087;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=6:164250808-164250916;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:36:1|0:5:26:22:2:./.:0:0:0:0:0/1:37:25:./.:.:.:.:.:.
chr6	165724666	HG4_Ill_MetaSV_4746	GGTCCCCCATCTCTGCAGGTCTTAGGCTGGACATAGAACCCGAATCGCTGGAGAGCTGCCAGTTATCTCTCTTTAACCCTTGCCTTCCCTTCCAAACATAACACTGGACAGATACTTGAAACGTGAACATTCTGGAAACCAAGAAGCTGCCAGGACCTTCACCTGCTCAGGTGGCTTCATCACCAGGTGCATTGGAATTCCACCTGTGAAAAGGTTACCGGAGTGTTTACTGCTTGTCTCTCTGGAACGTGCATGGTAGTTAGGCATCTTAACTATGACAGAAAGGTCGACATGAAGATGCCCAAGCTGCGTAAGGATGTCTAGGTATGGGCACCAGAGAGGAAATGCTGTGTGCCCCTCGCCTGCAGTTCGTTATAAAGTAGGCTCACATGGGCAGCGGAGAGGAAACACTGTGTGCCCCTCACCTGCAGCTCATTATGAAGTAGGCTCACATGGGCAGCAGGCCAGGTTTTTAGATAACCAACAATTAGAGATGAGGAAATGAACCTCTATGCTCAGAAATCCTTAGTAAACTAGTCAATCTCATAACTTCTAAAATAGTCCATCGCTTCCACACTGCGCAGTCAGGCAGAGAGGTGACAATAGGTGTTCTCCACTTTTCTTTCACAGATGGGCAGGAGGGACAAAGGGCCCCTCTGCCGGCCTTGGGAGGGATAGTGATGAGGAGTGCATCCCACCACGAGAGCTGCTCAGTTCTGGGGTTCAGCCTGTGCTACCCTCACTCCTGCTCCCTAGCGTAGACATTATGTGGAATTGCAGAGTATTGGTTTTGATCAAAAGAAAATAATTTGTTTTTAGGGCCTCAGTTTCTCCCAAGTCATCCCTTATGGCAGAACACAAATGCAGTTAAATTAATTCATCCACCCCTTACTTATATGCTATCAAGATCAGAAAGTCAATGATCAAATCAATATCAGGCCTTAAAAGCCCATCTGTGGCTCTCCTATTGCTAAATATTTCATCAAAGCATTTGAGGCAGAAACATACTTAACGACAACATTATCAGCATAATGAATTGATGTGCCAGAAACACACTGGATCTTCCTTGAGGCCAGACTTCTATGTAGAAATAGCCAAGAACTACTCAGCAGGCAAATTGCGTCTGCACATATTTCAGTGACTATGGCTGCTGTTTTGCTTATCCACTCCAGATAGCGCTTGAACACATCCTAAAACACTTGGCCACTGAATGCAACCCAAGGGTGAGGCCATTCTACCATCCCAACTAATCCACGCATCCACCCGTCCTTTCATCCTACCCCTCATTCCAGAAAAAAAATTAAAAATTAAAAATCTTTGTCTACTATTGTTTCTTTGCTAGGACTGCAGAAATGCACAATGAATCCCCTACTTTAAAAATGCTCGGTGAAGAGGAGACCACTGGGGAGTAAAATGCAGTGTGATGTGAGCAGCAGTGGAGATGGGCGTGGACCGGCAGAGGAAGGAGTGAAGGATTCACATCTCATAGGCTGCGGAGGCTTCCAGAAATACCACCTGTTCCAGGTGTGCAGGATGGGCGAGCGGGAGTTCCTTGTCAATCATGGGGGAGGGTCGGGGAGCATCAGTCAGAAGAACTGATGGGTTCCAAAAGGGAAGAGGTCACAAATAAGTGATTCCAGTTACTGCTTTTCAGCTATTAGACTCTGCTGTGCAAAAATGAACCGACTTGCAATAACTTAAAACATCTTTGTGCTTCCTAAGCTCTGGAGAAACTGAATAATGCTTTTAAGAAATTTTAGATAGAATGCAAAGCAAATGCTGGCCTGGCAGGAGGATGTGGGGTTGGGGGTGGGATGAGAATTCTTGGATGGGGCAGGGGCAGAGTCCGGAGGGAGTTTCAGTTTGGTCCTGAAGATGGCTGAAGAGTCATCAAGAGTCACTGAAAAATGTTTTACAGAGTGGGGTATCATCACTTCTTTCTAGAGAAATGACTGTTGCTATACTTCATAGAGAATGAAGGGAACAGGGCTAAGAGCCAAGAATGACATCTCCAGTTCTAGGCACGTAAGCAATGGTGGCTGGCAGTGACACTCCAAATTCTCCACCCTCCTCTTGATGTGTCAGGGAAAAGCCTCTCACCCATCCAAGGCCAAAGTGCTTTGCTCCTGGGCTCTCTTGCCCTCTTGCTTTTTCAAGGGCCCCGGTTCATTGGTCTGTTTTTCCATCTGTCTCTCTTTTCCTCTCCTCTCCTCTCTCTCACTCTCGCCATCTCTCTCTTGCATCATTCATCTTTGCTTTTCTATAGGAACATTTCTATCAGAAAATTAACATGTTCATTTTTCTCATCTCAAAAACACATATAAACAAGACCTTTGCATTGACTCTACACCTCTCTAAGGCAGGTATTCCATACAACAGATCCAGGTCAGAGTCTGTCACAAGGAAGCTGTTGGCCAGCCTGCCAAGGAGGAGGAAACACGAAGCTCTCGGTCCACCTGCGTTCTCTGTGAGGGAGCCTCCTACGGCACTGTTATCTGTGGCACAGGTGGGCTATTTCCACTTATCCCAAAGCTTCTCCTGTGGAGCCTGGATTTTGCCCTAAAAGTAATTTTCTGCAATATAGCTTCATTTTTGGGTGGTATTTGAGGGCAAAATAACTATAAGACTCTGGAAGTTTGAAAAATCGATGAAGAAATGGTGCAGTCAGAACGCACCTCTTGAAGGGCTTCCTAACATCCCTTCCCCACGCCCCAACTCCCCAGCAAGTCTCTTTCCTCCTTTGGAAAGTAAAACAAACTTCATTCAATGACATTTGTGCATAAAAACTGCATTTCTTTATTTTCAAACTGTTGTTTATCACTCATCTACACCTGTTTCCAAAAGCTCCATTATTTTTTCAACTGTGAAAATGATTTGGGCATCTTGGGTCAAGACAGGAGACATCATGATTCCCCCATTAAGTGAGAGGTATGTGGGCCATGAAAATCCCCCCAGCACACCCCATAGCCTCTGGTCACTCCCTTCAGAGACCACCCATCTGACCAGCTGCTTATACGACTTCCCACAGGCAGCCCGTGTAGACAAGAAAATTCACTCACACCATCTCTCCGTCCTCTCTCTTCCACCATGACAGCGGGCCACTCCCACTTCCTCCACCTTGCTTTTTTCTCTTGGAAATCATTCCGGACTAGTGCATAAAGAGCACCTGACTTTTTACATGTCTGGGCAGTGTTCCATTGTATGGCTCTACTGTGATTTATTCCAGCCACAGACCACTGATGGACATATAGGCTCTTTCCATTCTTCTGCTATTAAATCCCACTGCTGGTCCTCCAGTCACTTCCTGTGTGTGTGAATCTGTAGGTAAACACAGAACTTGAGCACCTGGGGTGGAGTCGCCAAGTTTGTGCCCATGGGATGTTGAGAAAGAGCATCAAATTGTTCTCAGAAGGGTTATTACAGTTTGCTCAATCCCAGCAGTAATGAGAGTGCCTGCTTCTCCACCTCTTCATTACCAGATGGCATTTTCAAACACAAAGTCACCACACTGTCTGATCTTTGCCAATACAAGGTTGCCAACAAGATGTCAAGAGAGAAGGAAAATCTACAATGAAACTGTGAAGGAAAAAAAAAACCCTAAGATGTTATAAAAGTACATTGTAACTGCAGTGGTGAGTCTTAAACTATTTTACATAAGATGACCAGGGAAGGCCTCTATTTGTTTCTTGTGGCTGCCATTATAAATAACCATAGACTTAGCAGCTTGAAAGAAACAATGAATTTACTTTCTCACATTGCTGGAAGTCCAAAGTCTGAAATGGCTCTCACTGGCTAAAATCCAGGTGTGGGCAGTGGGCAGGGCTGCTTCCTCCTGGAGGCTACTGAGGAGAGTCCCCTTCCTTGCCTTTTTCAGCATCTAGAGGCCACCTGGTTCCTGGCTCCTGGGCCCTTCCTCCATCTGCAAAGCCGGCGAGGCTGGGAGAGTCTTTCTCACATCCCAGACACCCTCCTGCCTCTCTGTTCTCTCCTTTTTTTTTTTGTGATGGAGTCTCACTCTGTCACCCAGGCTGGAGTACAGTGGCACCATCTTGGCTTGCTGCAACCTCCGCCTCCCAGGTTGAAGCAGTTCTCCTGCCTCAGGCTCCCAAGTAGCTGGGATTACAGGCACCCACCGGCATACCTGGCTAATTTTTGTATTTTTAATAGAGACAGGGTTTCGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTGGGGAATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAACCACCGTACTTGGCCTGTTCTCTATAAAAGGAGCCCTGTGATGGCACTGCTCCAGCCTAGATAGTGCAGGCTCGTCTTCCTATTTTAAGCCCAGCTGATCAGCAGCCCTGATCCCCCCTGCAGCCCCATATCTTCTCTGCCCAGTGAGCTCACATCTTCACCAGTTCTGGGGATTAGAGTGTGGCGCTCTTTGACTGCAACCTTCCAGAGGAGGTGACAAAGAGCCAGAGGAAGAGAATTCTTGGCATCAAGCTAGAGAATGTGGTGCAGACCTGACCCCCCTTTTCCAAAACTCCTGTGTGGCCTGACACTGGAGGTAGAACATTGGCTAGGGATGGGGGAGATGGTTCAAATCGTTGTCTGTTTTTTGTTGTTTGTGTTTCATTGGTCGATTTGTTTATGATTAGAGAGATTGGAGGGATCCCATGTTGAGGGAATGGGGCCAGTGGAGTGAAAAATGTTGAAAGTCTGGGAAATAGGCGACATTTGATTTCATGACTTGGTATGTGTCTAAAAGGTGTGTCTGGGCTCGGTGGATTGGCTCACGCCTGTAATCCCAGTATTTTGGGAGGCCAAGGCAGGCGGATCACTTGAACTCAGGAGTTCAAAACCAGTCAGGGCAACATGGCAAAACCCCTACCAAAAGTACAAAAAAATTGGCCAGGTGTGGTGGTGTGTGCCTGTGGTTCCCAACTACTTGGGAGGCTAAGGCAGGAAGATTGCTTGAGCCTGGGAGGTGGAGATTGCAGTGAGCCGAGATCACACCACTTCACTCCAGCCTGGGTGACAGAGCAAGACCTTGTCTCAATAAATAAATAAATAAATAAATACATATATACATACATAAATACATACATATACAAGTAAATTTAAAACTAAAGAAATAGATAAAAGGTGTGTGTGACCTGCTCCAAGGGAATCTTGCCATAGACAAGGGGGAAAGAAATTCACTGTTGCTGGGGAAGGCAAAAGCAAACCAGAGGTGGAGTAGTCCAGTTCCCCAGATGCTTTCCGTCATCCTGATGTTAATGTAGTTCTTAGGAAAGCACACCTAAAAGCGAGGCCCATGTGGCTCCCGGGGGATGATGTCCAGGCACTGCACGTGGGGCACGTGGCCCTCTCCAGCCTGGATTTGCAGAAATCAGAGGCCCTCATACTATGCCCTTTGAATTTCCGCAGGGAGTGGAATTGACCGAGTGCAAACGCAGGGTGACCTCTGCAAGCTCGCAGCGCCAACGCGGGAACCCCAGCATGGTCTGGCTGCAGAGTCTGTCTGATTGTCCAATCAAACCCGCATCTGTGGGGAAACAAGACATGATTCCTACCAACTGTTTTTCAAAATATTTGGAGTTGCTGATTATTTACTGTTTCTGGTCCTTGTTTCATATTGCTGATATATTCATTGGTAACAAATGGTTGCTCACATTTCTAAAAATGAAATAATGGGAGGCCTAGTGGTTCCTGAATACAAGGGCTAGAAAGGAATGAATGGCGCCTCCCCGGGAGCTGTCCGCTCCTTCCCACTTCCACAAGCGTTTCCATTGAGGCTGAGGGTTGTTCCCCGCCCTTGAGAGTGGAGACCTTCCCCTTCCAGGGTAGATGGGTGGCCAAGGCTTGTCTTTCCCCCAGGGATTTTCCCAGCAGTACGGCAGACAGAAGGATTTTCTGTGTGTAGAACCTAGAGTGGGGGAACATCGCTACTTAGTTAAAAAAAAGCCTGAAGTTGTCCAAATAAGAACAAACATGGTTGACTTTTTAAATTCTTAAGGTTAGGAAATGTGAGCTGTCAGGGGGAAGACCTGAAGTCCTGGTTACTGGCCACCCTCTGGGCTGGCGGGGGAGGGATGGCCTCTGGGAGACTTTGGGCGCTTCCTTGATCTCTCTGTGCCCTTTGCTCCCTTCTCTATGCAGCACCACAACCCAGAGTAGCCTCCATTGACCGCCCTGCACTGTGCTGAGAAGAGTGCCACTCAACACCTGGAGGGTTCGCGTCAATTCTTTCCTTCTAGAATTCCCCACGTTTATCTACACAAGCCTGCACCCCACCCCACCCCCGCTCCTCAGAGGCACAGAACTGATTGGAAGCATGCCTGGAGACACGCTAACCTTTATTCTCTCCACCCTCTTCCCCTAAATACAATGACACCGACATTGGGTGTTTTGGGGGGAGGGAGCGGCACAGGATAATTTAAAGCCATTGTAATTTTCGCTTTGTCCACTCTGGGCTTCCCTTCTCATTCCCGAATCCCAGAGGGGTTTATGACACAGGCAGAAAGCAGGCATTTGGAATGATTCTCCTTTCTTGTTCTTGGTGTTTGTTTTGGAAGCCGAATGTCATCGACTATATTGAAGGATTTTCTCGGAGGGAAAAGGAGACACAGCGGCCTTTGAGAAGGGGAGGAGGAGAGGGGAGTCCAGCCTGGAAAGAGAACACCAGCGTGGACGGTGGACGGGGACTCCTGCCTCAGCGATGGTGCTGCGCTGGCCTGCCCTCCACGGGGGCATCTGTCATCAGGACCCAGGCCAGGAGCAGCTTCGCAGGAATGCAGAGAGGCCTTCCTTGAACGCTTGGAACAAACCTGAGAGTCTCCTTGGACGTCCTTGGAGATGAGTGCGATAAAAATTCCCACCACCTAGCAAAAATGGAGTCATCAGACTTGAGATCTGCAAATGAATTGAACATTTTTCCTCCACCTGGACTGTAGAGTATGGCAGATGCCCAGTACAAGCCACATGTACTCTTCTTCCAAATAAGAGCGGCAGAGTGAGCGACCGTATGCCTGCCACCTAGGTGACAAAATTAATACTCCGACTTCCTTATCTGTCTCTCCGTCCACACTTTGTGCTGAAATCTTTGAGTTGGTAGTAAAGTTATGAGTTTTTACCCTTAGATAATTCAGCACTCAGCAGGTCTGCTAAAGTAAAGACATTCTCTTTCTAAACCACAGACCATGGTTACTGAAGAAACCAAGTCATGACTTCTGTCTGCAGACACCTAGCAAATATTCACAGTTCCCACTTTCCACAAAATTTCTTCTATAGCTGTGTTTTCAAATAAGAATCCATATATTTGGTTATTACCCCCTTTATTTATTTTTATTTTTTTATTATACTTTAAGTTCTGGGATACATGTGCAGAACATGCAGGTTTGTGACATAGGTACACATGTGCCATGATGGTTTGCTGCACCCATCAACCC	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_894:HG4_PB_pbsv_7523:HG3_10X_allpass_1544:HG3_PB_pbsv_7278:HG4_10X_allpass_1502:HG4_Ill_Krunchall_11217:HG4_PB_assemblyticsfalcon_23422:HG2_10X_allpass_1283:HG4_PB_SVrefine2PBcRDovetail_3711:HG4_PB_SVrefine2Falcon1Dovetail_4566:HG4_Ill_SVrefine2DISCOVARDovetail_5579:HG4_Ill_MetaSV_4746:HG3_PB_SVrefine2PBcRDovetail_3416:HG3_PB_SVrefine2Falcon1Dovetail_4511:HG3_Ill_SVrefine2DISCOVARDovetail_5761:HG3_Ill_MetaSV_4712:HG2_PB_pbsv_7521:HG2_PB_assemblyticsfalcon_24031:HG2_PB_SVrefine2PBcRplusDovetail_9886:HG2_PB_SVrefine2PB10Xhap12_5462:HG2_PB_SVrefine2Falcon1plusDovetail_10628:HG2_Ill_breakscan11_1087:HG2_Ill_SpiralSDKrefine_15346:HG2_Ill_MetaSV_4544:HG2_10X_SVrefine210Xhap12_5404;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5404:HG2_Ill_MetaSV_4544:HG2_Ill_SpiralSDKrefine_15346:HG2_Ill_breakscan11_1087:HG2_PB_SVrefine2Falcon1plusDovetail_10628:HG2_PB_SVrefine2PB10Xhap12_5462:HG2_PB_SVrefine2PBcRplusDovetail_9886:HG2_PB_assemblyticsfalcon_24031:HG2_PB_pbsv_7521:HG3_Ill_MetaSV_4712:HG3_Ill_SVrefine2DISCOVARDovetail_5761:HG3_PB_SVrefine2Falcon1Dovetail_4511:HG3_PB_SVrefine2PBcRDovetail_3416:HG4_Ill_MetaSV_4746:HG4_Ill_SVrefine2DISCOVARDovetail_5579:HG4_PB_SVrefine2Falcon1Dovetail_4566:HG4_PB_SVrefine2PBcRDovetail_3711;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00120587;ClusterMaxSizeDiff=0.00120587;ClusterMaxEditDist=0.00120587;PBcalls=12;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-7466;DistBack=47703;DistForward=-7464;DistMin=-7464;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=6:165724667-165732135;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3567.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:71:0|1:46:0:1:40:./.:0:0:0:0:0/1:49:12:0/1:416:216:7417:.:.
chr6	166235678	HG2_PB_SVrefine2PB10Xhap12_5466	ACACACACCTGGATGGCACAGTCCACCACACACCTGGGCTGGATGGCACAGCCCAC	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11675:HG3_PB_HySA_11530:HG3_PB_pbsv_7282:HG4_PB_pbsv_7526:HG4_Ill_250bpfermikitraw_10572:HG3_Ill_250bpfermikitraw_10282:HG2_Ill_250bpfermikitraw_10577:HG2_PB_pbsv_7525:HG4_PB_SVrefine2PBcRDovetail_3714:HG4_PB_SVrefine2Falcon1Dovetail_4570:HG4_Ill_SVrefine2DISCOVARDovetail_5583:HG3_PB_SVrefine2PBcRDovetail_3420:HG3_PB_SVrefine2Falcon1Dovetail_4515:HG3_Ill_SVrefine2DISCOVARDovetail_5764:HG2_PB_SVrefine2PBcRplusDovetail_9890:HG2_PB_SVrefine2PB10Xhap12_5466:HG2_PB_SVrefine2Falcon2Bionano_3676:HG2_PB_SVrefine2Falcon1plusDovetail_10632;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11675:HG4_PB_SVrefine2PBcRDovetail_3714:HG4_PB_SVrefine2Falcon1Dovetail_4570:HG4_Ill_SVrefine2DISCOVARDovetail_5583:HG3_PB_SVrefine2PBcRDovetail_3420:HG3_PB_SVrefine2Falcon1Dovetail_4515:HG3_Ill_SVrefine2DISCOVARDovetail_5764:HG2_PB_SVrefine2PBcRplusDovetail_9890:HG2_PB_SVrefine2PB10Xhap12_5466:HG2_PB_SVrefine2Falcon2Bionano_3676:HG2_PB_SVrefine2Falcon1plusDovetail_10632;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0740741;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=229;REFWIDENED=6:166235679-166235962;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.0179;SizeDiff=0;StartDistance=-55;EndDistance=-55;GTMatch=0;TruScore=66;MatchId=3568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:1:17:0:34:./.:0:0:0:0:./.:6:1:./.:.:.:.:.:.
chr6	166635399	HG3_Ill_svaba_9817	GATAAACACCTGCAGATGAGACGGCTCCTGCAACGATAAACAGCTGCAGATGAGACGGCTCCTGCAAC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3683:HG2_PB_assemblyticsfalcon_24045:HG4_PB_assemblyticsfalcon_23436:HG4_Ill_svaba_9833:HG4_Ill_GATKHC_12651:HG4_Ill_GATKHCSBGrefine_5343:HG4_Ill_250bpfermikitraw_10583:HG4_Ill_150bpfermikitraw_10153:HG3_PB_assemblyticsfalcon_23880:HG3_Ill_svaba_9817:HG3_Ill_GATKHC_12575:HG3_Ill_GATKHCSBGrefine_5204:HG3_Ill_250bpfermikitraw_10287:HG3_Ill_150bpfermikitraw_10009:HG2_Ill_svaba_9740:HG2_Ill_GATKHC_12605:HG2_Ill_GATKHCSBGrefine_5262:HG2_Ill_250bpfermikitraw_10583:HG4_Ill_GATKHC_12650:HG4_Ill_GATKHCSBGrefine_5342:HG4_Ill_250bpfermikitraw_10582:HG2_Ill_GATKHC_12604:HG2_Ill_GATKHCSBGrefine_5261:HG2_Ill_250bpfermikitraw_10582:HG4_PB_pbsv_7536:HG2_PB_pbsv_7533:HG3_PB_pbsv_7290:HG4_PB_SVrefine2PBcRDovetail_3722:HG2_PB_SVrefine2PBcRplusDovetail_9897:HG2_PB_SVrefine2PB10Xhap12_5474;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10583:HG2_Ill_GATKHCSBGrefine_5262:HG2_Ill_GATKHC_12605:HG2_Ill_svaba_9740:HG3_Ill_150bpfermikitraw_10009:HG3_Ill_250bpfermikitraw_10287:HG3_Ill_GATKHCSBGrefine_5204:HG3_Ill_GATKHC_12575:HG3_Ill_svaba_9817:HG3_PB_assemblyticsfalcon_23880:HG4_Ill_150bpfermikitraw_10153:HG4_Ill_250bpfermikitraw_10583:HG4_Ill_GATKHCSBGrefine_5343:HG4_Ill_GATKHC_12651:HG4_Ill_svaba_9833:HG4_PB_assemblyticsfalcon_23436;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0147059;ClusterMaxSizeDiff=0.0145985;ClusterMaxEditDist=0.175182;PBcalls=10;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-67;DistBack=-118;DistForward=27753;DistMin=-118;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:166635398-166635467;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9853;PctRecOverlap=0.8261;SizeDiff=-1;StartDistance=12;EndDistance=11;GTMatch=0;TruScore=93;MatchId=3569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:62:1/1:2:27:3:32:./.:0:0:0:0:0/1:7:28:./.:.:.:.:.:.
chr6	167198133	HG3_PB_SVrefine2Falcon1Dovetail_4530	GAACCACATATACACATGTGCACACCTATCTATACCACATATATACACGTGCACACCTATGCATAACCACATATGCACACGTGCACACCTATCTATA	TC	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_24054:HG4_PB_assemblyticsfalcon_23446:HG4_PB_SVrefine2Falcon1Dovetail_4584:HG3_PB_assemblyticsfalcon_23892:HG3_PB_SVrefine2Falcon1Dovetail_4530:HG2_PB_SVrefine2Falcon1plusDovetail_10646;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10646:HG3_PB_SVrefine2Falcon1Dovetail_4530:HG3_PB_assemblyticsfalcon_23892:HG4_PB_SVrefine2Falcon1Dovetail_4584:HG4_PB_assemblyticsfalcon_23446;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0102564;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0410256;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-95;DistBack=-96;DistForward=11810;DistMin=-96;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:167198132-167198230;PctSeqSimilarity=0.9537;PctSizeSimilarity=1;PctRecOverlap=0.4536;SizeDiff=0;StartDistance=52;EndDistance=53;GTMatch=0;TruScore=80;MatchId=3571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:31:0|1:12:0:0:18:./.:0:0:0:0:1/1:0:14:./.:.:.:.:.:.
chr6	167418101	HG3_10X_allpass_1549	TTTGATCCTCAAGAGTGTTGGGTCATGAGCTAAACTGTCTGGAACAAATCCCAACTCCTCGTTGCCTCAC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_557:HG2_PB_pbsv_7544:HG4_PB_pbsv_7551:HG4_PB_assemblyticsfalcon_23452:HG4_Ill_svaba_9849:HG4_Ill_scalpel_7319:HG4_Ill_manta_1904:HG4_Ill_Krunchall_11237:HG4_Ill_GATKHC_12666:HG4_Ill_GATKHCSBGrefine_5348:HG4_Ill_Cortex_3319:HG4_Ill_250bpfermikitraw_10599:HG4_Ill_150bpfermikitraw_10165:HG4_CG_vcfBeta_5043:HG4_10X_allpass_1505:HG3_PB_pbsv_7301:HG3_PB_assemblyticsfalcon_23898:HG3_Ill_svaba_9829:HG3_Ill_manta_1799:HG3_Ill_SVrefine2DISCOVARDovetail_5777:HG3_Ill_Krunchall_10632:HG3_Ill_GATKHC_12588:HG3_Ill_GATKHCSBGrefine_5209:HG3_Ill_Cortex_3342:HG3_Ill_250bpfermikitraw_10297:HG3_Ill_150bpfermikitraw_10018:HG3_CG_vcfBeta_4294:HG3_10X_allpass_1549:HG2_Ill_svaba_9755:HG2_Ill_scalpel_7478:HG2_Ill_manta_2209:HG2_Ill_breakscan11_1089:HG2_Ill_SpiralSDKrefine_15358:HG2_Ill_Krunchall_10907:HG2_Ill_GATKHC_12617:HG2_Ill_GATKHCSBGrefine_5266:HG2_Ill_Cortex_8100:HG2_Ill_250bpfermikitraw_10594:HG2_Ill_150bpfermikitraw_9976:HG2_CG_vcfBeta_4494:HG2_10X_allpass_1284:HG2_10X_SVrefine210Xhap12_5425:HG4_PB_HySA_11153:HG3_Ill_Spiral_8310:HG2_PB_SVrefine2Falcon2Bionano_3689;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5425:HG2_10X_allpass_1284:HG2_CG_vcfBeta_4494:HG2_Ill_150bpfermikitraw_9976:HG2_Ill_250bpfermikitraw_10594:HG2_Ill_Cortex_8100:HG2_Ill_GATKHCSBGrefine_5266:HG2_Ill_GATKHC_12617:HG2_Ill_Krunchall_10907:HG2_Ill_SpiralSDKrefine_15358:HG2_Ill_breakscan11_1089:HG2_Ill_manta_2209:HG2_Ill_scalpel_7478:HG2_Ill_svaba_9755:HG3_10X_allpass_1549:HG3_CG_vcfBeta_4294:HG3_Ill_150bpfermikitraw_10018:HG3_Ill_250bpfermikitraw_10297:HG3_Ill_Cortex_3342:HG3_Ill_GATKHCSBGrefine_5209:HG3_Ill_GATKHC_12588:HG3_Ill_Krunchall_10632:HG3_Ill_SVrefine2DISCOVARDovetail_5777:HG3_Ill_manta_1799:HG3_Ill_svaba_9829:HG3_PB_assemblyticsfalcon_23898:HG3_PB_pbsv_7301:HG4_10X_allpass_1505:HG4_CG_vcfBeta_5043:HG4_Ill_150bpfermikitraw_10165:HG4_Ill_250bpfermikitraw_10599:HG4_Ill_Cortex_3319:HG4_Ill_GATKHCSBGrefine_5348:HG4_Ill_GATKHC_12666:HG4_Ill_Krunchall_11237:HG4_Ill_manta_1904:HG4_Ill_scalpel_7319:HG4_Ill_svaba_9849:HG4_PB_assemblyticsfalcon_23452;NumExactMatchSVs=39;ClusterMaxShiftDist=0.0285714;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.0289855;PBcalls=7;Illcalls=31;TenXcalls=4;CGcalls=3;PBexactcalls=3;Illexactcalls=29;TenXexactcalls=4;CGexactcalls=3;HG2count=17;HG3count=14;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-69;DistBack=-71;DistForward=4432;DistMin=-71;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=6:167418102-167418179;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3572.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:31:1|0:2:25:41:3:./.:0:0:0:0:0/1:32:24:./.:.:.:.:.:.
chr6	167488071	HG2_PB_SVrefine2PBcRplusDovetail_9903	AGAAATTAAATTTGTTTAACAGCAAAATCTTTCAAATAAGGAAACTCTAGATCCAGATGATTTTACTGATTAACTCTACCAATCATTTAAAGAAGAAATAATAGAAATCCTTCACGAAGTCTTGCAGAAATGAGGAAGAGGGAGCACTTCTCAACAGACACCAAACCAGACGGACAGTGCACTAAAATAACCCCCCAACACCCATGTCCCTCATAAACACAGATACAAAAATGTGGAAAAATATTAGCAAATGAAATCCAGCAATAGGTAAAATTAATAATACATGGTGACTACATTGAGTTTTTCTGGGGGAGTGCTAGGGTGGCTCAATATTTGAAAGACAATGCCATCCAATATGTTAACATTCTAAAGAAACACCACCTTATCATGCCAATTTATGTAGAAAAATCATTCATTTGATAAAATTAAACAGCCATTCATGATAAAATTCTCAACAAACTAGGAATAGAAGGGAATTTACTCAACCTGATAGAGGATGTCCACAAAAAACCTACAGCTAACATGATGGTGGAGGAATGAATGCTTTCCTTCCAAAGCTGTCCATTCTCATCACTCCTGCTCAATATTGTACTGGAAGTGATACCCTGTGCAATAAAAAAAAGAAAGAAAAGCTTACAGATTTGAAAGAAGATACAAAACTGTTCCTACTCACAGACTTGGTGATTTTCTATGTAGAAATCCTTGGCCTTAGGATTCCAGACAACCTTGATCCCCCTCCAATTTCTCACACTGTTCACTCAGTGTATTCAGCTAGTGTTTAGCTCTGTGACAAAGATTCTCTGTCACCTGGGTCAGAGGAAACTAGAGCTGACTCAGGGTCCAGCTGGTTCTCATGCTTTACATCCAGTTTGCTCCCTTCTTTCCCACTCGACATCCATTTTCGTTCCTGACTGCCTGCCCTGCCAACCTGAAGCACCAGCATCAAATGGAGAGAAAACAAACTTACCTTCCGAATAGATTTTCTACTGGTTTTGCTTCTCTGGTTAAACTCTGAGACAGTTATTTAATCTCTCAGTTTCATTATCTAAAAATGGGAAATCATACCTATTTAATCAGTTCAATCAGTTCATGGTTTTTGGTTTTTTTTTTTCCTTTTTGAGATGGAGTCTTGCTTGATGCCTAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAACCTCCACCTCCCAGGTTTGAGTGATTCTCCTGCCTTAGCCTCCTGAGTAGCTGGGATTACAAGCACAAGTCACCACGCCCAGCTTATTTTTATTTTTTTGTGAGGACGGAGTTTCCCCATCTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGTCTTGGCCTCCCAAAGTGCTGAGATTACAGGCATGAGCCACTGCACCCGACCATCTCATGTTTTTAGAAACATACTTGCTAGGTATTTTTTTCTGTTAGAGAAAAGGGATCTACCTGTCTCCCTGTCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCT	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_24063:HG4_PB_pbsv_7552:HG2_PB_PB10Xdip_24907:HG2_Ill_tnscope_895:HG2_PB_assemblyticsPBcR_23302:HG2_PB_SVrefine2PBcRplusDovetail_9903:HG2_PB_SVrefine2Falcon1plusDovetail_10650:HG2_10X_SVrefine210Xhap12_5427:HG2_Ill_SpiralSDKrefine_15359:HG2_Ill_breakscan11_1090:HG2_PB_SVrefine2PB10Xhap12_5485:HG2_PB_pbsv_7545:HG4_Ill_MetaSV_4751:HG2_Ill_MetaSV_4551:HG4_10X_allpass_1506:HG2_10X_allpass_1285;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5427:HG2_PB_SVrefine2Falcon1plusDovetail_10650:HG2_PB_SVrefine2PBcRplusDovetail_9903:HG2_PB_assemblyticsPBcR_23302;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00397088;ClusterMaxSizeDiff=0.00397088;ClusterMaxEditDist=0.00463116;PBcalls=8;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-1505;DistBack=31744;DistForward=27977;DistMin=27977;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=6:167488071-167489576;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9993;PctRecOverlap=0.9993;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3573.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:50:18:0|1:48:0:0:15:./.:0:0:0:0:0/1:46:8:0/1:125:50:1426:.:.
chr6	167731942	HG2_Ill_svaba_9761	CTCTGTGTGACAGGAGCCTGAGCCTCCTCTGAGTCACTGGAGGGGTTCAATTGAGCTCAACGGAGGA	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_10603:HG4_PB_assemblyticsfalcon_23458:HG2_PB_assemblyticsPBcR_23307:HG4_Ill_svaba_9854:HG4_PB_pbsv_7554:HG2_PB_pbsv_7551:HG4_Ill_scalpel_7325:HG4_Ill_Krunchall_11244:HG4_Ill_GATKHCSBGrefine_5349:HG4_Ill_250bpfermikitraw_10608:HG2_Ill_svaba_9761:HG2_Ill_scalpel_7483:HG2_Ill_SpiralSDKrefine_15364:HG2_Ill_Krunchall_10910:HG2_Ill_GATKHCSBGrefine_5268;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10603:HG4_Ill_svaba_9854:HG4_Ill_scalpel_7325:HG4_Ill_Krunchall_11244:HG4_Ill_GATKHCSBGrefine_5349:HG4_Ill_250bpfermikitraw_10608:HG2_Ill_svaba_9761:HG2_Ill_scalpel_7483:HG2_Ill_SpiralSDKrefine_15364:HG2_Ill_Krunchall_10910:HG2_Ill_GATKHCSBGrefine_5268;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0300752;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.210526;PBcalls=4;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=1142;DistForward=43340;DistMin=1142;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=113;REFWIDENED=6:167731943-167732121;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:41:0|1:33:2:1:36:./.:0:0:0:0:0/1:35:19:./.:.:.:.:.:.
chr6	168476532	HG4_Ill_250bpfermikitraw_10618	CGTGTCCACATTTCCGGTGCCCGGTGTCCACATTTCCGGCGTCCCGTGTCCACATTTCCGGTGCCCG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5444:HG4_PB_HySA_11198:HG3_PB_HySA_11606:HG4_PB_pbsv_7580:HG3_PB_pbsv_7335:HG2_PB_pbsv_7579:HG4_PB_HySA_11197:HG3_PB_HySA_11605:HG2_PB_HySA_14008:HG4_Ill_svaba_9873:HG4_Ill_scalpel_7331:HG4_Ill_Krunchall_11253:HG4_Ill_GATKHCSBGrefine_5357:HG4_Ill_250bpfermikitraw_10618:HG4_Ill_150bpfermikitraw_10186:HG3_Ill_svaba_9847:HG3_Ill_scalpel_7602:HG3_Ill_manta_1803:HG3_Ill_Krunchall_10642:HG3_Ill_GATKHC_12606:HG3_Ill_GATKHCSBGrefine_5215:HG3_Ill_250bpfermikitraw_10314:HG3_Ill_150bpfermikitraw_10030:HG2_Ill_svaba_9777:HG2_Ill_scalpel_7489:HG2_Ill_manta_2213:HG2_Ill_SpiralSDKrefine_15372:HG2_Ill_Krunchall_10918:HG2_Ill_GATKHC_12636:HG2_Ill_GATKHCSBGrefine_5274:HG2_Ill_250bpfermikitraw_10613:HG2_Ill_150bpfermikitraw_9993:HG4_Ill_Spiral_636:HG3_Ill_Spiral_8321:HG2_Ill_Spiral_558:HG4_PB_SVrefine2Falcon1Dovetail_4607:HG4_Ill_SVrefine2DISCOVARDovetail_5598:HG3_PB_SVrefine2Falcon1Dovetail_4554:HG3_Ill_SVrefine2DISCOVARDovetail_5787:HG2_PB_SVrefine2PBcRplusDovetail_9916:HG2_PB_SVrefine2PB10Xhap12_5506:HG2_PB_SVrefine2Falcon2Bionano_3705:HG2_PB_SVrefine2Falcon1plusDovetail_10673:HG2_Ill_SVrefine2DISCOVARplusDovetail_11694;NumClusterSVs=44;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9993:HG2_Ill_250bpfermikitraw_10613:HG2_Ill_GATKHCSBGrefine_5274:HG2_Ill_GATKHC_12636:HG2_Ill_Krunchall_10918:HG2_Ill_SpiralSDKrefine_15372:HG2_Ill_manta_2213:HG2_Ill_scalpel_7489:HG2_Ill_svaba_9777:HG3_Ill_150bpfermikitraw_10030:HG3_Ill_250bpfermikitraw_10314:HG3_Ill_GATKHCSBGrefine_5215:HG3_Ill_GATKHC_12606:HG3_Ill_Krunchall_10642:HG3_Ill_manta_1803:HG3_Ill_scalpel_7602:HG3_Ill_svaba_9847:HG4_Ill_150bpfermikitraw_10186:HG4_Ill_250bpfermikitraw_10618:HG4_Ill_GATKHCSBGrefine_5357:HG4_Ill_Krunchall_11253:HG4_Ill_scalpel_7331:HG4_Ill_svaba_9873;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.105263;PBcalls=14;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=-66;DistBack=1350;DistForward=-24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=83;REFWIDENED=6:168476510-168476658;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3577.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:46:1/1:1:26:2:17:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr6	168478059	HG2_Ill_SVrefine2DISCOVARplusDovetail_11695	GGGGGGTTCCTGTCTAACTGCAGACATAGATGACTGCACAACCCAGTGAGGGGTTCCTGTCCAACTGCAGACACAGATGTGCACACACCCTGTGG	A	20	PASS	ClusterIDs=HG3_PB_HySA_11607:HG4_PB_pbsv_7581:HG3_PB_pbsv_7336:HG3_Ill_GATKHCSBGrefine_5216:HG2_Ill_GATKHCSBGrefine_5275:HG3_Ill_SVrefine2DISCOVARDovetail_5788:HG2_PB_SVrefine2PBcRplusDovetail_9917:HG2_PB_SVrefine2PB10Xhap12_5507:HG2_PB_SVrefine2Falcon2Bionano_3706:HG2_PB_SVrefine2Falcon1plusDovetail_10674:HG2_Ill_SVrefine2DISCOVARplusDovetail_11695:HG2_10X_SVrefine210Xhap12_5445:HG4_PB_SVrefine2Falcon1Dovetail_4608:HG2_PB_pbsv_7580:HG3_Ill_250bpfermikitraw_10315:HG2_Ill_250bpfermikitraw_10614;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5445:HG2_Ill_SVrefine2DISCOVARplusDovetail_11695:HG2_PB_SVrefine2Falcon1plusDovetail_10674:HG2_PB_SVrefine2Falcon2Bionano_3706:HG2_PB_SVrefine2PB10Xhap12_5507:HG2_PB_SVrefine2PBcRplusDovetail_9917:HG3_Ill_SVrefine2DISCOVARDovetail_5788;NumExactMatchSVs=7;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.228571;PBcalls=9;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-94;DistBack=-139;DistForward=1060;DistMin=-139;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=6:168478058-168478154;PctSeqSimilarity=0.99;PctSizeSimilarity=1;PctRecOverlap=0.4842;SizeDiff=0;StartDistance=49;EndDistance=49;GTMatch=0;TruScore=82;MatchId=3578.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:./.:9:25:21:1:./.:0:0:0:0:0/1:22:18:./.:.:.:.:.:.
chr6	168569234	HG3_Ill_SVrefine2DISCOVARDovetail_5791	GCTGAATACAGTCATTAAGCGAGGGACTTCCTGAATACAGTCATTAAGCGGGGGACTTCCTGAATACAGTCATTAAGCGGGGGACTTCCTGAATAGTCATTAAGCGGGGGACTTCCTGAATACAGTCATTAAGCGGGGGACTTCCTGAATACAGTCATTAAGCGGGGGACTTCCTGAATACAGTCATTAAGCGGGGGACTTCCTGAACACAGTCATTAAGCGGGGGACTTC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5448:HG3_PB_pbsv_7344:HG3_Ill_250bpfermikitraw_10322:HG2_PB_pbsv_7586:HG4_Ill_SVrefine2DISCOVARDovetail_5604:HG3_PB_SVrefine2PBcRDovetail_3449:HG3_Ill_SVrefine2DISCOVARDovetail_5791:HG2_PB_SVrefine2PBcRplusDovetail_9920:HG2_PB_SVrefine2PB10Xhap12_5510:HG2_PB_SVrefine2Falcon2Bionano_3710;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5448:HG4_Ill_SVrefine2DISCOVARDovetail_5604:HG3_PB_SVrefine2PBcRDovetail_3449:HG3_Ill_SVrefine2DISCOVARDovetail_5791:HG2_PB_SVrefine2PBcRplusDovetail_9920:HG2_PB_SVrefine2PB10Xhap12_5510:HG2_PB_SVrefine2Falcon2Bionano_3710;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00434783;ClusterMaxSizeDiff=0.00433839;ClusterMaxEditDist=0.00869565;PBcalls=6;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-230;DistBack=-173;DistForward=-85;DistMin=-173;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=291;REFWIDENED=6:168569264-168569755;PctSeqSimilarity=0.9931;PctSizeSimilarity=1;PctRecOverlap=0.9091;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=96;MatchId=3579.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:46:./.:13:22:30:16:./.:0:0:0:0:./.:7:1:./.:.:.:.:.:.
chr6	168716918	HG3_Ill_SVrefine2DISCOVARDovetail_5794	CCAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCAGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGGCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCAGCAGCACCTCCCTTCCCATCACGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCAGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTGTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAACAGCATCTCGGCAGCACCTCCCTTCCCATGTGTGTAACACGTCTGTGGCTGTCGTGTGCTGAGCTGAGGTCACGCAGAAGCTGCGATTGTGTCTGGTGCAAACACACAA	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3744:HG3_PB_pbsv_7353:HG4_Ill_MetaSV_4761:HG3_Ill_MetaSV_4723:HG2_Ill_MetaSV_4557:HG2_Ill_breakscan11_1094:HG4_PB_pbsv_7595:HG2_PB_pbsv_7595:HG3_PB_pbsv_7352:HG3_PB_SVrefine2PBcRDovetail_3452:HG3_PB_SVrefine2Falcon1Dovetail_4559:HG3_Ill_SVrefine2DISCOVARDovetail_5794:HG2_PB_SVrefine2Falcon2Bionano_3715:HG2_Ill_SVrefine2DISCOVARplusDovetail_11704:HG2_PB_SVrefine2PBcRplusDovetail_9922:HG2_PB_SVrefine2PB10Xhap12_5513:HG2_PB_SVrefine2Falcon1plusDovetail_10683;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11704:HG2_PB_SVrefine2Falcon2Bionano_3715:HG3_Ill_SVrefine2DISCOVARDovetail_5794:HG3_PB_SVrefine2Falcon1Dovetail_4559:HG3_PB_SVrefine2PBcRDovetail_3452;NumExactMatchSVs=5;ClusterMaxShiftDist=0.149533;ClusterMaxSizeDiff=0.149533;ClusterMaxEditDist=0.149533;PBcalls=11;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-1606;DistBack=4686;DistForward=-1488;DistMin=-1488;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=334;REFWIDENED=6:168716919-168718858;PctSeqSimilarity=0.5649;PctSizeSimilarity=0.929;PctRecOverlap=0.9147;SizeDiff=114;StartDistance=-137;EndDistance=-23;GTMatch=0;TruScore=80;MatchId=3580.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:1:21:2:21:./.:0:0:0:0:0/1:7:20:./.:8:72:1674:.:.
chr6	168889509	HG2_Ill_250bpfermikitraw_10629	ATCTGGGTCCCCTTGCATCACACTGTTTTAGAATGAAATATATCAAATCGTCTGGGTCCCCTTGGATCACACTGTTTTAGAATGAAATATATCAAATCG	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_10629:HG2_PB_pbsv_7604:HG4_PB_pbsv_7604:HG4_PB_assemblyticsfalcon_23513:HG4_PB_SVrefine2Falcon1Dovetail_4619:HG4_Ill_GATKHC_12712:HG4_Ill_250bpfermikitraw_10632;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10629:HG4_PB_assemblyticsfalcon_23513:HG4_PB_SVrefine2Falcon1Dovetail_4619:HG4_Ill_GATKHC_12712:HG4_Ill_250bpfermikitraw_10632;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0204082;ClusterMaxSizeDiff=0.0204082;ClusterMaxEditDist=0.0204082;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-98;DistBack=-575;DistForward=-87;DistMin=-575;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=236;REFWIDENED=6:168889305-168889638;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3581.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:20:0|1:28:2:4:17:./.:0:0:0:0:0/1:14:6:./.:.:.:.:.:.
chr6	169966140	HG3_Ill_150bpfermikitraw_10070	AAACCAGATCAATTATGTAAGAAATAAAACATTTTGTAATGTATTGTTACTCGTTAGAAGG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10028:HG4_PB_assemblyticsfalcon_23574:HG3_PB_assemblyticsfalcon_24000:HG4_PB_HySA_11314:HG4_PB_pbsv_7652:HG3_PB_pbsv_7403:HG2_PB_pbsv_7648:HG4_Ill_svaba_9934:HG4_Ill_Krunchall_11287:HG4_Ill_GATKHCSBGrefine_5393:HG4_Ill_250bpfermikitraw_10666:HG4_Ill_150bpfermikitraw_10227:HG3_Ill_Krunchall_10673:HG3_Ill_GATKHCSBGrefine_5243:HG3_Ill_250bpfermikitraw_10357:HG3_Ill_150bpfermikitraw_10070:HG2_PB_HySA_14082:HG2_Ill_svaba_9835:HG2_Ill_Krunchall_10956:HG2_Ill_GATKHCSBGrefine_5317:HG2_Ill_250bpfermikitraw_10663;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10028:HG4_Ill_svaba_9934:HG4_Ill_Krunchall_11287:HG4_Ill_GATKHCSBGrefine_5393:HG4_Ill_250bpfermikitraw_10666:HG4_Ill_150bpfermikitraw_10227:HG3_Ill_Krunchall_10673:HG3_Ill_GATKHCSBGrefine_5243:HG3_Ill_250bpfermikitraw_10357:HG3_Ill_150bpfermikitraw_10070:HG2_PB_HySA_14082:HG2_Ill_svaba_9835:HG2_Ill_Krunchall_10956:HG2_Ill_GATKHCSBGrefine_5317:HG2_Ill_250bpfermikitraw_10663;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0166667;ClusterMaxSizeDiff=0.0165289;ClusterMaxEditDist=0.0661157;PBcalls=7;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=13005;DistForward=16397;DistMin=13005;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=115;REFWIDENED=6:169966123-169966297;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3583.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:29:0:1:30:./.:0:0:0:0:0/1:32:25:./.:.:.:.:.:.
chr6	170209984	HG3_Ill_MetaSV_4732	GGTTGTTAACTATTCTGAGTGTTATCTCTTTTTTCTATCTATCACATATACATTGAAACGCTTCCATCCTTTTCCTCAAGCCAATGCCCCCACTCTCCGAGGAGACTCTGCTCTGAGTTCGGTGTGTGGAGTTGGGTGACGTTTGGAAAGACAGCATGCTACACATAATGTAAATGTAACTACTTATGTTTCCAGAAATAAACTTCAGTATTTTATGCCCTAGTTGAATCTTGAAATAATACAATTGAAGTTCAAGCTTGAAATGCTCTAAAAAGTTTGAAAAGCTAAGTTCAACTGTACAATTTGAAGACTTCTCCAGTGCTGAGGCTTAGCTGTTCACCCTGACCTGGGGAGGGTTGTGGAGCCTGTGTTGTTGGAGCAAAC	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_896:HG3_PB_pbsv_7406:HG2_PB_pbsv_7653:HG3_PB_SVrefine2PBcRDovetail_3479:HG3_Ill_manta_1814:HG3_Ill_MetaSV_4732:HG3_Ill_GATKHCSBGrefine_5244:HG3_10X_allpass_1559:HG2_Ill_manta_2223:HG2_Ill_SpiralSDKrefine_15405:HG2_Ill_GATKHCSBGrefine_5318:HG2_10X_allpass_1288:HG3_PB_assemblyticsfalcon_24005:HG3_PB_SVrefine2Falcon1Dovetail_4593:HG2_PB_SVrefine2PBcRplusDovetail_9955:HG2_PB_SVrefine2Falcon1plusDovetail_10717;NumClusterSVs=16;ExactMatchIDs=HG2_10X_allpass_1288:HG2_Ill_GATKHCSBGrefine_5318:HG2_Ill_SpiralSDKrefine_15405:HG2_Ill_manta_2223:HG3_10X_allpass_1559:HG3_Ill_GATKHCSBGrefine_5244:HG3_Ill_MetaSV_4732:HG3_Ill_manta_1814:HG3_PB_SVrefine2PBcRDovetail_3479;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.0797872;PBcalls=7;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-383;DistBack=-384;DistForward=-366;DistMin=-384;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=92;REFWIDENED=6:170209932-170210406;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3584.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:30:./.:16:22:12:1:./.:0:0:0:0:0/1:49:18:./.:25:2:.:.:.
chr6	170354935	HG2_Ill_GATKHC_12715	ACCGTGTCCCTGCTGTCCCACCGTGTCCCTGCTGTCCCACCATGTCCCTGCTGTCCCACTGTGTCCCCGCTGTCCCT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_7656:HG3_PB_HySA_11694:HG2_PB_HySA_14087:HG4_Ill_scalpel_7364:HG4_Ill_GATKHC_12771:HG4_Ill_GATKHCSBGrefine_5397:HG3_Ill_scalpel_7629:HG3_Ill_GATKHC_12673:HG2_PB_assemblyticsfalcon_24184:HG2_Ill_scalpel_7516:HG2_Ill_GATKHC_12715:HG2_Ill_GATKHCSBGrefine_5320:HG2_Ill_150bpfermikitraw_10033:HG2_PB_assemblyticsPBcR_23426:HG4_PB_pbsv_7667:HG3_PB_pbsv_7411;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10033:HG2_Ill_GATKHCSBGrefine_5320:HG2_Ill_GATKHC_12715:HG2_Ill_scalpel_7516:HG2_PB_assemblyticsfalcon_24184:HG3_Ill_GATKHC_12673:HG3_Ill_scalpel_7629:HG4_Ill_GATKHCSBGrefine_5397:HG4_Ill_GATKHC_12771:HG4_Ill_scalpel_7364;NumExactMatchSVs=10;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.185185;PBcalls=7;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-76;DistBack=-16;DistForward=70;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=294;REFWIDENED=6:170354694-170355063;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3585.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:1/1:0:7:2:41:./.:0:0:0:0:1/1:0:11:./.:.:.:.:.:.
chr6	170564903	HG3_PB_SVrefine2PBcRDovetail_3500	GAGCCAGCCGTGACCCACTCCCTCGTCCGCGACCATGGAACCGAGCCCCTGTCTCCTGCACACCACACC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11735:HG3_PB_pbsv_7447:HG3_PB_HySA_11743:HG3_PB_HySA_11742:HG2_PB_pbsv_7674:HG3_Ill_250bpfermikitraw_10372:HG3_Ill_150bpfermikitraw_10084:HG2_PB_assemblyticsfalcon_24205:HG2_Ill_250bpfermikitraw_10675:HG4_PB_SVrefine2Falcon1Dovetail_4682:HG3_PB_SVrefine2PBcRDovetail_3500:HG3_Ill_SVrefine2DISCOVARDovetail_5827;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11735:HG4_PB_SVrefine2Falcon1Dovetail_4682:HG3_PB_SVrefine2PBcRDovetail_3500:HG3_Ill_SVrefine2DISCOVARDovetail_5827;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0431655;ClusterMaxSizeDiff=0.0431655;ClusterMaxEditDist=0.0735294;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-68;DistBack=-69;DistForward=120;DistMin=-69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=172;REFWIDENED=6:170564904-170565143;PctSeqSimilarity=0.992;PctSizeSimilarity=0.9855;PctRecOverlap=0.8143;SizeDiff=-1;StartDistance=-12;EndDistance=-13;GTMatch=0;TruScore=93;MatchId=3586.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:23:0|1:22:4:4:17:./.:0:0:0:0:0/1:8:3:./.:.:.:.:.:.
chr7	117608	HG2_Ill_SVrefine2DISCOVARplusDovetail_11744	CCACAGCCCCCCGGCAGCCGCCGATCCCCCCGACACAGCCCCCCGGGAGCCGCCGATCCCCCCGACACAGCCCCCCGGGAGCCGCCGATCCCCCCGACACAGCCCCCCGGGAGCCGCCGATCCCCCCGA	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11744:HG3_PB_SVrefine2Falcon1Dovetail_4631:HG3_PB_assemblyticsfalcon_24042:HG2_PB_assemblyticsfalcon_24222:HG2_PB_SVrefine2Falcon1plusDovetail_10762:HG2_PB_pbsv_7695:HG3_PB_pbsv_7464:HG3_PB_SVrefine2PBcRDovetail_3513:HG4_PB_pbsv_7726:HG3_Ill_SVrefine2DISCOVARDovetail_5833;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11744:HG3_Ill_SVrefine2DISCOVARDovetail_5833;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0155039;ClusterMaxSizeDiff=0.0155039;ClusterMaxEditDist=0.0310078;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-128;DistBack=-129;DistForward=-85;DistMin=-129;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=64;REFWIDENED=7:117609-117800;PctSeqSimilarity=0.9922;PctSizeSimilarity=1;PctRecOverlap=0.8915;SizeDiff=0;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=96;MatchId=3589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:22:5:5:22:./.:0:0:0:0:./.:4:4:./.:.:.:.:.:.
chr7	140243	HG2_Ill_SVrefine2DISCOVARplusDovetail_11745	CTCTTTGAGTGCTGAGCATGGGAGGCAGGTGGGGGGCCAAGGTCTTTGAGTGCTGAGCATGGGAGGCAGGTGGGGGGCCAAGGTCTTTGAGTGCTGAGCATGGGAGGCAGGTGGGGGGCCAAGG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11745:HG3_PB_assemblyticsfalcon_24045:HG3_PB_SVrefine2Falcon1Dovetail_4634:HG3_Ill_GATKHC_12718:HG3_Ill_GATKHCSBGrefine_5260:HG3_PB_pbsv_7466:HG2_PB_SVrefine2Falcon1plusDovetail_10764:HG2_PB_pbsv_7698:HG4_PB_SVrefine2Falcon1Dovetail_4705:HG4_Ill_SVrefine2DISCOVARDovetail_5640:HG3_PB_SVrefine2PBcRDovetail_3514:HG3_PB_SVrefine2Falcon1Dovetail_4633:HG2_PB_SVrefine2PBcRplusDovetail_9996:HG2_PB_SVrefine2PB10Xhap12_5588;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11745:HG4_PB_SVrefine2Falcon1Dovetail_4705:HG4_Ill_SVrefine2DISCOVARDovetail_5640:HG3_PB_SVrefine2PBcRDovetail_3514:HG3_PB_SVrefine2Falcon1Dovetail_4633:HG2_PB_SVrefine2PBcRplusDovetail_9996:HG2_PB_SVrefine2PB10Xhap12_5588;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.048;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-123;DistBack=6343;DistForward=-124;DistMin=-124;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=209;REFWIDENED=7:140244-140575;PctSeqSimilarity=0.9865;PctSizeSimilarity=1;PctRecOverlap=0.8145;SizeDiff=0;StartDistance=-23;EndDistance=-23;GTMatch=0;TruScore=93;MatchId=3591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:49:1|0:8:42:16:4:./.:0:0:0:0:0/1:9:2:./.:.:.:.:.:.
chr7	220900	HG3_PB_SVrefine2PBcRDovetail_3515	AGGGCACAGGGCGGAGCCTCGTCTCTAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCTGGGCACAGGGCGGAGGCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCTGGGCACAGGGCGGAGCCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCTGGGCACAGGGCGGAGCCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCTGGGCACAGGGCGGAGCCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCTGGGCACAGGGCGGAGCCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTCCTTAGCATCTGGGCACAGGGCGGAGCCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTCCTTAGCATCTGGGCACAGGGCGGAGCCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCTGGGCACAGGGCGGAGGCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCTGGGCACAGGGCGGAGCCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCTGGGCACAGGGCGGAGCCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCTGGGCACAGGGCGGAGCCTCGTCTCCAGCAGGGCAGGGGGCTGCAGGAGCCGTTCTTAGCATCT	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5593:HG3_PB_SVrefine2Falcon1Dovetail_4638:HG2_PB_pbsv_7707:HG4_PB_pbsv_7737:HG3_PB_pbsv_7472:HG4_PB_SVrefine2Falcon1Dovetail_4713:HG3_PB_SVrefine2PBcRDovetail_3515:HG2_PB_SVrefine2PBcRplusDovetail_9998:HG2_PB_SVrefine2Falcon2Bionano_3781:HG2_PB_SVrefine2Falcon1plusDovetail_10769;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10769:HG2_PB_SVrefine2Falcon2Bionano_3781:HG2_PB_SVrefine2PBcRplusDovetail_9998:HG3_PB_SVrefine2PBcRDovetail_3515:HG4_PB_SVrefine2Falcon1Dovetail_4713;NumExactMatchSVs=5;ClusterMaxShiftDist=0.285283;ClusterMaxSizeDiff=0.285283;ClusterMaxEditDist=0.285283;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-756;DistBack=-253;DistForward=-730;DistMin=-730;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=325;REFWIDENED=7:220901-221981;PctSeqSimilarity=0.9924;PctSizeSimilarity=1;PctRecOverlap=0.5694;SizeDiff=0;StartDistance=-326;EndDistance=-326;GTMatch=0;TruScore=85;MatchId=3592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:10:22:./.:4:11:4:5:./.:0:0:0:0:./.:7:0:0/1:6:8:.:.:.
chr7	230731	HG4_Ill_svaba_9991	GTAATATACTGAATAATACCTATTGGTAAATGAAGGGAAAATTCCTGTGTGTTTACTGCTCTCAA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10058:HG2_PB_pbsv_7710:HG3_PB_pbsv_7474:HG4_PB_pbsv_7739:HG4_Ill_svaba_9991:HG4_Ill_Krunchall_11315:HG4_Ill_GATKHC_12822:HG4_Ill_GATKHCSBGrefine_5418:HG4_Ill_250bpfermikitraw_10703:HG4_Ill_150bpfermikitraw_10262:HG3_Ill_svaba_9952:HG3_Ill_Krunchall_10697:HG3_Ill_GATKHC_12730:HG3_Ill_GATKHCSBGrefine_5265:HG3_Ill_250bpfermikitraw_10390:HG3_Ill_150bpfermikitraw_10100:HG2_Ill_svaba_9869:HG2_Ill_scalpel_7530:HG2_Ill_SpiralSDKrefine_15428:HG2_Ill_Krunchall_10978:HG2_Ill_GATKHC_12750:HG2_Ill_GATKHCSBGrefine_5340:HG2_Ill_250bpfermikitraw_10695;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10058:HG4_Ill_svaba_9991:HG4_Ill_Krunchall_11315:HG4_Ill_GATKHC_12822:HG4_Ill_GATKHCSBGrefine_5418:HG4_Ill_250bpfermikitraw_10703:HG4_Ill_150bpfermikitraw_10262:HG3_Ill_svaba_9952:HG3_Ill_Krunchall_10697:HG3_Ill_GATKHC_12730:HG3_Ill_GATKHCSBGrefine_5265:HG3_Ill_250bpfermikitraw_10390:HG3_Ill_150bpfermikitraw_10100:HG2_Ill_svaba_9869:HG2_Ill_scalpel_7530:HG2_Ill_SpiralSDKrefine_15428:HG2_Ill_Krunchall_10978:HG2_Ill_GATKHC_12750:HG2_Ill_GATKHCSBGrefine_5340:HG2_Ill_250bpfermikitraw_10695;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0314961;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.0472441;PBcalls=3;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-64;DistBack=5063;DistForward=1688;DistMin=1688;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=129;REFWIDENED=7:230705-230897;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3593.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:0|1:21:1:0:17:./.:0:0:0:0:0/1:23:21:./.:.:.:.:.:.
chr7	322322	HG4_Ill_Krunchall_11316	GAGGAGGGGGTGAGGGTTGAACAGTGGACAGTGGGGACTCCCAGAGCGGGA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5598:HG4_PB_assemblyticsfalcon_23652:HG4_Ill_Krunchall_11316:HG4_Ill_GATKHCSBGrefine_5420:HG4_Ill_250bpfermikitraw_10707:HG2_Ill_250bpfermikitraw_10697:HG2_Ill_150bpfermikitraw_10060:HG4_PB_SVrefine2PBcRDovetail_3810:HG2_PB_SVrefine2PBcRplusDovetail_10006;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10060:HG2_Ill_250bpfermikitraw_10697:HG4_Ill_250bpfermikitraw_10707:HG4_Ill_GATKHCSBGrefine_5420:HG4_Ill_Krunchall_11316:HG4_PB_assemblyticsfalcon_23652;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0196078;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.117647;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=82;DistForward=19;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=152;REFWIDENED=7:322241-322442;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3594.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:34:0|1:18:2:4:30:./.:0:0:0:0:0/1:6:11:./.:.:.:.:.:.
chr7	348978	HG4_PB_SVrefine2PBcRDovetail_3811	CCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTTGAGAGTTTGAGACCAGCCTGACCAACATGGAGAACCCTATCTCTACTAAAAATACAAATTAGCCAGGCGTGGTGGTGCATGG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11746:HG3_PB_HySA_11765:HG2_PB_HySA_14135:HG4_PB_HySA_11389:HG2_PB_PB10Xdip_27279:HG3_Ill_GATKHC_12742:HG3_Ill_GATKHCSBGrefine_5269:HG3_PB_SVrefine2PBcRDovetail_3519:HG3_Ill_SVrefine2DISCOVARDovetail_5839:HG4_PB_pbsv_7748:HG2_PB_pbsv_7717:HG3_PB_pbsv_7481:HG4_PB_SVrefine2PBcRDovetail_3811:HG2_PB_SVrefine2PBcRplusDovetail_10007:HG2_PB_SVrefine2PB10Xhap12_5600:HG2_PB_SVrefine2Falcon1plusDovetail_10774;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11746:HG4_PB_SVrefine2PBcRDovetail_3811:HG2_PB_SVrefine2PBcRplusDovetail_10007:HG2_PB_SVrefine2PB10Xhap12_5600:HG2_PB_SVrefine2Falcon1plusDovetail_10774;NumExactMatchSVs=5;ClusterMaxShiftDist=0.168675;ClusterMaxSizeDiff=0.168675;ClusterMaxEditDist=0.178862;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-132;DistBack=5003;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=162;REFWIDENED=7:348979-349272;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:43:0|1:29:2:3:35:./.:0:0:0:0:0/1:24:25:./.:.:.:.:.:.
chr7	491206	HG2_Ill_scalpel_7539	TCCTCTCTCTGTGTCTTTCCCCTCCGTCTCTCTCTCTCTGTCTCTCTCTGTTTCTCACTCTTCTGTCTCTCTCTGTCTCTGTCTCTCTCTGTCTCTGTTTGTCTCTCTCTCACCCTCTCTCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_7730:HG4_PB_assemblyticsfalcon_23665:HG2_PB_SVrefine2Falcon1plusDovetail_10782:HG4_PB_SVrefine2Falcon1Dovetail_4727:HG2_PB_SVrefine2Falcon1plusDovetail_10781:HG3_PB_SVrefine2PBcRDovetail_3525:HG2_PB_SVrefine2PBcRplusDovetail_10015:HG2_10X_SVrefine210Xhap12_5515:HG3_PB_HySA_11773:HG3_PB_pbsv_7490:HG3_Ill_svaba_9965:HG3_Ill_scalpel_7656:HG3_Ill_GATKHC_12751:HG2_Ill_svaba_9882:HG2_Ill_scalpel_7539;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_scalpel_7539:HG2_Ill_svaba_9882:HG3_Ill_GATKHC_12751:HG3_Ill_scalpel_7656:HG3_Ill_svaba_9965;NumExactMatchSVs=5;ClusterMaxShiftDist=0.139535;ClusterMaxSizeDiff=0.139535;ClusterMaxEditDist=0.229885;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=-121;DistBack=7440;DistForward=-113;DistMin=-113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=7:491205-491336;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3596.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:23:./.:27:14:0:7:./.:0:0:0:0:0/1:32:9:./.:.:.:.:.:.
chr7	515231	HG2_10X_SVrefine210Xhap12_5519	GCCAGCACTGCGGGAGGCCGGGGCGAGAGGCTACATCACCAGCACTGCAGGAGGCCGGGGCATGAGGCTGCAGGACCAGCACTGTGGGAGGCCAGGGCATGAGGCTGCAGGACCAGCACTGTGGGAGGCCGAGGCATGAGGCTGCAGGACCAGCACTGTGGGAGGCCAAGGCATGAGGCTGCAGGACCAGCACTGTGGGAGGCCGATGGGGGAGGCTAGAGCC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5519:HG3_PB_pbsv_7500:HG2_PB_pbsv_7739:HG4_PB_pbsv_7775:HG3_PB_HySA_11786:HG3_Ill_MetaSV_4748:HG4_PB_SVrefine2Falcon1Dovetail_4733:HG4_PB_HySA_11411:HG4_Ill_SVrefine2DISCOVARDovetail_5648:HG4_Ill_GATKHCSBGrefine_5432:HG3_PB_SVrefine2PBcRDovetail_3529:HG3_PB_SVrefine2Falcon1Dovetail_4650:HG3_Ill_GATKHCSBGrefine_5272:HG2_PB_SVrefine2PB10Xhap12_5614:HG2_PB_SVrefine2Falcon1plusDovetail_10789;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5519:HG4_PB_SVrefine2Falcon1Dovetail_4733:HG4_PB_HySA_11411:HG4_Ill_SVrefine2DISCOVARDovetail_5648:HG4_Ill_GATKHCSBGrefine_5432:HG3_PB_SVrefine2PBcRDovetail_3529:HG3_PB_SVrefine2Falcon1Dovetail_4650:HG3_Ill_GATKHCSBGrefine_5272:HG2_PB_SVrefine2PB10Xhap12_5614:HG2_PB_SVrefine2Falcon1plusDovetail_10789;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0134831;ClusterMaxSizeDiff=0.0134831;ClusterMaxEditDist=0.013544;PBcalls=10;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-222;DistBack=4375;DistForward=-164;DistMin=-164;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=254;REFWIDENED=7:515232-515707;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3597.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:0|1:20:5:1:21:./.:0:0:0:0:0/1:16:12:./.:.:.:.:3160:.
chr7	571272	HG4_Ill_GATKHC_12849	AGACAGGGGAGGTGAGGGGGACAGGGGAGGTGAGGGGGACAGGGGAGGTGAGGGGGACAGGGGAGGTGAGGGGGACAGGGGAGGTGAGGGG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_7779:HG2_PB_assemblyticsfalcon_24253:HG2_PB_HySA_14162:HG4_PB_HySA_11416:HG3_PB_pbsv_7508:HG3_PB_HySA_11794:HG4_PB_SVrefine2PBcRDovetail_3824:HG4_Ill_svaba_10013:HG4_Ill_GATKHC_12849:HG4_Ill_GATKHCSBGrefine_5433:HG4_10X_allpass_1514:HG3_Ill_svaba_9972:HG3_Ill_SVrefine2DISCOVARDovetail_5844:HG3_Ill_GATKHC_12757:HG3_10X_allpass_1566:HG2_PB_assemblyticsPBcR_23484:HG2_PB_SVrefine2PBcRplusDovetail_10022:HG2_PB_SVrefine2PB10Xhap12_5618:HG2_PB_SVrefine2Falcon2Bionano_3799:HG2_PB_SVrefine2Falcon1plusDovetail_10794:HG2_Ill_SVrefine2DISCOVARplusDovetail_11755:HG2_Ill_GATKHC_12777:HG2_Ill_GATKHCSBGrefine_5352:HG2_Ill_250bpfermikitraw_10708:HG2_10X_SVrefine210Xhap12_5521:HG2_PB_pbsv_7743;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5521:HG2_Ill_250bpfermikitraw_10708:HG2_Ill_GATKHCSBGrefine_5352:HG2_Ill_GATKHC_12777:HG2_Ill_SVrefine2DISCOVARplusDovetail_11755:HG2_PB_SVrefine2Falcon1plusDovetail_10794:HG2_PB_SVrefine2Falcon2Bionano_3799:HG2_PB_SVrefine2PB10Xhap12_5618:HG2_PB_SVrefine2PBcRplusDovetail_10022:HG2_PB_assemblyticsPBcR_23484:HG3_10X_allpass_1566:HG3_Ill_GATKHC_12757:HG3_Ill_SVrefine2DISCOVARDovetail_5844:HG3_Ill_svaba_9972:HG4_10X_allpass_1514:HG4_Ill_GATKHCSBGrefine_5433:HG4_Ill_GATKHC_12849:HG4_Ill_svaba_10013:HG4_PB_SVrefine2PBcRDovetail_3824;NumExactMatchSVs=19;ClusterMaxShiftDist=0.043956;ClusterMaxSizeDiff=0.043956;ClusterMaxEditDist=0.076087;PBcalls=13;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-90;DistBack=2858;DistForward=5810;DistMin=2858;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=7:571291-571408;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3598.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:52:1/1:5:22:1:23:./.:0:0:0:0:./.:0:8:./.:.:.:.:.:.
chr7	639341	HG3_PB_SVrefine2PBcRDovetail_3535	CCACCTTCACTCGCTCACCCTCTGTGTTTAGAAGTCAATGGTGGGACAGAGGTGCCAGGAGCTGGGGGAGGCACATGGGCAGGCCCCCCATTCACCTTCACTCGCTCACCCTCTGTGTTTAGAAGTCAATGGTGGGACAGGGGTGCCAGGAGCTGGGGGAGGCACACGGGCAGGCCCCCCATTCACCTTCACTCGCTCACCCTCTGTGTTTAGAAGTCAATGGTGGGACAGGGGTGCCAAGAGCTGGGGGAGGCGCACGGGCAGGCCCCCCATT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11758:HG2_Ill_Krunchall_10990:HG3_PB_SVrefine2Falcon1Dovetail_4661:HG3_Ill_MetaSV_4750:HG3_Ill_GATKHCSBGrefine_5274:HG3_10X_allpass_1568:HG2_Ill_GATKHCSBGrefine_5358:HG3_PB_pbsv_7516:HG2_PB_pbsv_7747:HG3_PB_SVrefine2PBcRDovetail_3535:HG3_Ill_SVrefine2DISCOVARDovetail_5846:HG2_PB_SVrefine2PB10Xhap12_5622:HG2_PB_SVrefine2Falcon2Bionano_3804:HG2_PB_SVrefine2Falcon1plusDovetail_10798;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11758:HG3_PB_SVrefine2PBcRDovetail_3535:HG3_Ill_SVrefine2DISCOVARDovetail_5846:HG2_PB_SVrefine2PB10Xhap12_5622:HG2_PB_SVrefine2Falcon2Bionano_3804:HG2_PB_SVrefine2Falcon1plusDovetail_10798;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00729927;ClusterMaxSizeDiff=0.00729927;ClusterMaxEditDist=0.014652;PBcalls=7;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-273;DistBack=-183;DistForward=-212;DistMin=-212;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=82;REFWIDENED=7:639342-639696;PctSeqSimilarity=0.99;PctSizeSimilarity=1;PctRecOverlap=0.8212;SizeDiff=0;StartDistance=-49;EndDistance=-49;GTMatch=0;TruScore=93;MatchId=3599.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:29:0|1:16:5:1:18:./.:0:0:0:0:0/1:28:20:./.:.:.:.:.:.
chr7	648632	HG4_Ill_GATKHCSBGrefine_5435	TGTGGCAGGGCTGTAGGGAGGGCCGGGGGGCCTCCACTGTCCTCCCACCTGGGGAGGGGTCAGTGG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5623:HG2_PB_pbsv_7749:HG4_PB_assemblyticsfalcon_23684:HG4_Ill_scalpel_7399:HG4_Ill_GATKHCSBGrefine_5436:HG2_PB_HySA_14177:HG4_Ill_GATKHC_12854:HG4_Ill_GATKHCSBGrefine_5435:HG2_Ill_GATKHC_12785:HG2_Ill_GATKHCSBGrefine_5359:HG4_PB_pbsv_7786:HG4_PB_HySA_11423:HG2_Ill_SpiralSDKrefine_15441:HG2_Ill_GATKHC_12784:HG4_PB_pbsv_7785:HG2_PB_SVrefine2PBcRplusDovetail_10025;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5359:HG2_Ill_GATKHC_12785:HG4_Ill_GATKHCSBGrefine_5435:HG4_Ill_GATKHC_12854;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0458015;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.232558;PBcalls=8;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-65;DistBack=364;DistForward=2895;DistMin=364;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=450;REFWIDENED=7:648229-648743;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3600.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:30:1|0:6:26:16:1:./.:0:0:0:0:0/1:6:4:./.:.:.:.:.:.
chr7	778683	HG2_PB_SVrefine2Falcon1plusDovetail_10801	CACCTGTTTGGGCTGGGGGCTGGCTGCAGTCTGGCTTGTCTCAGCCACGCCCTCTGCCCCATCACTGTATACCTGTTTGGGCTGGGGGCTGGCTGCAGTCTGGCTTGTCTCAGCCACGCCCTCTGCCCCATCACTGTAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5525:HG4_Ill_Spiral_640:HG3_Ill_Spiral_8382:HG2_Ill_Spiral_561:HG2_PB_pbsv_7755:HG4_Ill_manta_1924:HG4_Ill_GATKHCSBGrefine_5441:HG4_10X_allpass_1516:HG3_PB_HySA_11814:HG3_Ill_MetaSV_4751:HG3_Ill_GATKHCSBGrefine_5279:HG3_10X_allpass_1570:HG2_PB_SVrefine2Falcon1plusDovetail_10801:HG2_Ill_manta_2233:HG2_Ill_SpiralSDKrefine_15444:HG2_Ill_MetaSV_4576:HG2_Ill_GATKHCSBGrefine_5364:HG2_10X_allpass_1294:HG3_PB_pbsv_7524:HG4_PB_pbsv_7792:HG4_PB_SVrefine2PBcRDovetail_3828:HG4_Ill_SVrefine2DISCOVARDovetail_5655:HG3_PB_SVrefine2PBcRDovetail_3537:HG3_PB_SVrefine2Falcon1Dovetail_4666:HG3_Ill_SVrefine2DISCOVARDovetail_5851:HG2_PB_SVrefine2PBcRplusDovetail_10027:HG2_PB_SVrefine2PB10Xhap12_5626:HG2_PB_SVrefine2Falcon2Bionano_3807:HG2_Ill_SVrefine2DISCOVARplusDovetail_11759;NumClusterSVs=29;ExactMatchIDs=HG2_10X_allpass_1294:HG2_Ill_GATKHCSBGrefine_5364:HG2_Ill_MetaSV_4576:HG2_Ill_SpiralSDKrefine_15444:HG2_Ill_manta_2233:HG2_PB_SVrefine2Falcon1plusDovetail_10801:HG3_10X_allpass_1570:HG3_Ill_GATKHCSBGrefine_5279:HG3_Ill_MetaSV_4751:HG3_PB_HySA_11814:HG4_10X_allpass_1516:HG4_Ill_GATKHCSBGrefine_5441:HG4_Ill_manta_1924;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0143885;ClusterMaxSizeDiff=0.0143885;ClusterMaxEditDist=0.0217391;PBcalls=11;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-138;DistBack=-70;DistForward=-130;DistMin=-130;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=72;REFWIDENED=7:778669-778878;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:48:1/1:4:20:2:17:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr7	807757	HG4_Ill_150bpfermikitraw_10281	GGGCGGAAGTGTCCATGCTGCGAGCGCTCGCGGCTGGGAGCGCAGACACGTGGTCCA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_23494:HG4_PB_HySA_11440:HG2_PB_pbsv_7760:HG4_PB_pbsv_7797:HG2_PB_assemblyticsfalcon_24266:HG4_PB_assemblyticsfalcon_23693:HG4_Ill_scalpel_7405:HG4_Ill_Krunchall_11335:HG4_Ill_GATKHC_12864:HG4_Ill_GATKHCSBGrefine_5443:HG4_Ill_250bpfermikitraw_10729:HG4_Ill_150bpfermikitraw_10281:HG2_Ill_manta_2234:HG2_Ill_Krunchall_10996:HG2_Ill_GATKHC_12794:HG2_Ill_GATKHCSBGrefine_5366:HG2_Ill_250bpfermikitraw_10718;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10718:HG2_Ill_GATKHCSBGrefine_5366:HG2_Ill_GATKHC_12794:HG2_Ill_Krunchall_10996:HG2_Ill_manta_2234:HG4_Ill_150bpfermikitraw_10281:HG4_Ill_250bpfermikitraw_10729:HG4_Ill_GATKHCSBGrefine_5443:HG4_Ill_GATKHC_12864:HG4_Ill_Krunchall_11335:HG4_Ill_scalpel_7405:HG4_PB_assemblyticsfalcon_23693;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0357143;PBcalls=6;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=6120;DistForward=13429;DistMin=6120;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=7:807756-807834;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3602.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:42:1|0:4:32:19:3:./.:0:0:0:0:0/1:15:8:./.:.:.:.:.:.
chr7	879152	HG2_PB_SVrefine2Falcon1plusDovetail_10805	AGCTGGGATTACAGGCGCCCGCCACCACGCCTGGCAAATTTTCCTTTTTTTTTGAGACAGAGTCTCACTTCGTTGCCCAGGCTGGAGTACAGTGGTGGCGTGATCTTGGCTCACTGCAGCCTCTGCCTCCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGCGGTTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGTCTCAGGTGATCCGCCCATTGCAGCCTCCCAAAGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5531:HG3_Ill_Krunchall_10718:HG2_Ill_Krunchall_10999:HG3_PB_pbsv_7531:HG3_PB_assemblyticsfalcon_24091:HG2_PB_HySA_14189:HG4_Ill_MetaSV_4788:HG3_Ill_MetaSV_4752:HG2_Ill_MetaSV_4577:HG4_PB_pbsv_7799:HG4_Ill_scalpel_7407:HG4_Ill_GATKHCSBGrefine_5444:HG4_10X_allpass_1517:HG3_PB_SVrefine2Falcon1Dovetail_4670:HG3_Ill_scalpel_7668:HG3_Ill_manta_1825:HG3_Ill_GATKHCSBGrefine_5281:HG3_10X_allpass_1571:HG2_PB_SVrefine2Falcon1plusDovetail_10805:HG2_Ill_scalpel_7551:HG2_Ill_GATKHCSBGrefine_5367:HG2_PB_pbsv_7763:HG4_PB_SVrefine2PBcRDovetail_3831:HG3_PB_SVrefine2PBcRDovetail_3540:HG3_Ill_SVrefine2DISCOVARDovetail_5853:HG2_PB_SVrefine2PBcRplusDovetail_10030:HG2_PB_SVrefine2PB10Xhap12_5629:HG2_PB_SVrefine2Falcon1plusDovetail_10804;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5367:HG2_Ill_scalpel_7551:HG2_PB_SVrefine2Falcon1plusDovetail_10805:HG3_10X_allpass_1571:HG3_Ill_GATKHCSBGrefine_5281:HG3_Ill_manta_1825:HG3_Ill_scalpel_7668:HG3_PB_SVrefine2Falcon1Dovetail_4670:HG4_10X_allpass_1517:HG4_Ill_GATKHCSBGrefine_5444:HG4_Ill_scalpel_7407:HG4_PB_pbsv_7799;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00657895;ClusterMaxSizeDiff=0.00657895;ClusterMaxEditDist=0.0197694;PBcalls=12;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-303;DistBack=5310;DistForward=-289;DistMin=-289;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=7:879138-879471;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:14:38:./.:6:10:2:22:./.:0:0:0:0:0/1:60:18:0/1:20:7:.:.:.
chr7	904330	HG3_Ill_scalpel_7670	ATCTCGGCTCGCCGCAACCTCTGCCTCCCGGCTTCAAGCAATTCTCCTGCCTCAGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5533:HG4_PB_assemblyticsfalcon_23698:HG3_PB_assemblyticsfalcon_24097:HG4_PB_HySA_11445:HG2_PB_HySA_14193:HG3_PB_HySA_11826:HG4_PB_pbsv_7802:HG4_PB_SVrefine2PBcRDovetail_3833:HG4_Ill_svaba_10029:HG4_Ill_scalpel_7409:HG4_Ill_manta_1926:HG4_Ill_SVrefine2DISCOVARDovetail_5658:HG4_Ill_Krunchall_11337:HG4_Ill_GATKHC_12867:HG4_Ill_250bpfermikitraw_10732:HG4_Ill_150bpfermikitraw_10285:HG4_CG_vcfBeta_5095:HG3_PB_pbsv_7534:HG3_Ill_svaba_9988:HG3_Ill_scalpel_7670:HG3_Ill_manta_1826:HG3_Ill_SVrefine2DISCOVARDovetail_5855:HG3_Ill_Krunchall_10720:HG3_Ill_GATKHC_12773:HG3_Ill_GATKHCSBGrefine_5282:HG3_Ill_250bpfermikitraw_10415:HG3_Ill_150bpfermikitraw_10127:HG3_CG_vcfBeta_4345:HG2_PB_pbsv_7766:HG2_PB_SVrefine2PBcRplusDovetail_10032:HG2_PB_SVrefine2PB10Xhap12_5631:HG2_PB_SVrefine2Falcon2Bionano_3811:HG2_PB_SVrefine2Falcon1plusDovetail_10808:HG2_Ill_svaba_9904:HG2_Ill_scalpel_7553:HG2_Ill_manta_2235:HG2_Ill_SpiralSDKrefine_15451:HG2_Ill_SVrefine2DISCOVARplusDovetail_11762:HG2_Ill_Krunchall_11001:HG2_Ill_GATKHC_12799:HG2_Ill_250bpfermikitraw_10724:HG2_Ill_150bpfermikitraw_10082:HG2_CG_vcfBeta_4543;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5533:HG4_PB_pbsv_7802:HG4_PB_SVrefine2PBcRDovetail_3833:HG4_Ill_svaba_10029:HG4_Ill_scalpel_7409:HG4_Ill_manta_1926:HG4_Ill_SVrefine2DISCOVARDovetail_5658:HG4_Ill_Krunchall_11337:HG4_Ill_GATKHC_12867:HG4_Ill_250bpfermikitraw_10732:HG4_Ill_150bpfermikitraw_10285:HG4_CG_vcfBeta_5095:HG3_PB_pbsv_7534:HG3_Ill_svaba_9988:HG3_Ill_scalpel_7670:HG3_Ill_manta_1826:HG3_Ill_SVrefine2DISCOVARDovetail_5855:HG3_Ill_Krunchall_10720:HG3_Ill_GATKHC_12773:HG3_Ill_GATKHCSBGrefine_5282:HG3_Ill_250bpfermikitraw_10415:HG3_Ill_150bpfermikitraw_10127:HG3_CG_vcfBeta_4345:HG2_PB_pbsv_7766:HG2_PB_SVrefine2PBcRplusDovetail_10032:HG2_PB_SVrefine2PB10Xhap12_5631:HG2_PB_SVrefine2Falcon2Bionano_3811:HG2_PB_SVrefine2Falcon1plusDovetail_10808:HG2_Ill_svaba_9904:HG2_Ill_scalpel_7553:HG2_Ill_manta_2235:HG2_Ill_SpiralSDKrefine_15451:HG2_Ill_SVrefine2DISCOVARplusDovetail_11762:HG2_Ill_Krunchall_11001:HG2_Ill_GATKHC_12799:HG2_Ill_250bpfermikitraw_10724:HG2_Ill_150bpfermikitraw_10082:HG2_CG_vcfBeta_4543;NumExactMatchSVs=38;ClusterMaxShiftDist=0.188679;ClusterMaxSizeDiff=0.188679;ClusterMaxEditDist=0.188679;PBcalls=13;Illcalls=26;TenXcalls=1;CGcalls=3;PBexactcalls=8;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=3;HG2count=17;HG3count=13;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-56;DistBack=-3788;DistForward=1759;DistMin=-3788;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=7:904331-904391;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3604.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:1:16:3:23:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr7	951163	HG3_PB_SVrefine2PBcRDovetail_3546	TGCCAGGAAAGGGGCGGGGATCACACGGAGGGCCAGGAAGGGGGCGGGGGTCCCACGGAGGGCCAGGAAGGGGGCGGGGGTCCCACGGAGG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3818:HG4_PB_assemblyticsfalcon_23705:HG2_PB_SVrefine2Falcon1plusDovetail_10816:HG4_PB_SVrefine2Falcon1Dovetail_4749:HG3_PB_SVrefine2Falcon1Dovetail_4678:HG3_PB_assemblyticsfalcon_24105:HG4_PB_pbsv_7809:HG2_PB_pbsv_7773:HG3_PB_pbsv_7542:HG2_PB_HySA_14204:HG2_Ill_250bpfermikitraw_10727:HG4_Ill_SVrefine2DISCOVARDovetail_5663:HG3_PB_SVrefine2PBcRDovetail_3546:HG2_PB_SVrefine2PBcRplusDovetail_10039:HG2_PB_SVrefine2PB10Xhap12_5638;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3818:HG4_Ill_SVrefine2DISCOVARDovetail_5663:HG3_PB_SVrefine2PBcRDovetail_3546:HG2_PB_SVrefine2PBcRplusDovetail_10039:HG2_PB_SVrefine2PB10Xhap12_5638;NumExactMatchSVs=5;ClusterMaxShiftDist=0.021978;ClusterMaxSizeDiff=0.021978;ClusterMaxEditDist=0.0546448;PBcalls=13;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-90;DistBack=2206;DistForward=-91;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=217;REFWIDENED=7:951164-951470;PctSeqSimilarity=0.9792;PctSizeSimilarity=1;PctRecOverlap=0.7582;SizeDiff=0;StartDistance=-22;EndDistance=-22;GTMatch=0;TruScore=91;MatchId=3605.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:0:9:0:17:./.:0:0:0:0:0/0:13:1:./.:.:.:.:.:.
chr7	1118557	HG2_Ill_250bpfermikitraw_10733	CCAGCGGGTCAGGGCTCCATCAAGACTGCTGGTGAATGGCCGGCTGAGGAGGCAGCGAGG	C	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_24125:HG2_PB_HySA_14231:HG4_PB_HySA_11465:HG3_PB_HySA_11843:HG2_PB_assemblyticsPBcR_23510:HG4_PB_pbsv_7827:HG4_PB_assemblyticsfalcon_23720:HG4_Ill_svaba_10044:HG4_Ill_Krunchall_11344:HG4_Ill_GATKHC_12885:HG4_Ill_GATKHCSBGrefine_5450:HG4_Ill_250bpfermikitraw_10741:HG4_Ill_150bpfermikitraw_10294:HG3_PB_pbsv_7558:HG3_Ill_svaba_10007:HG3_Ill_Krunchall_10728:HG3_Ill_GATKHC_12785:HG3_Ill_GATKHCSBGrefine_5288:HG3_Ill_250bpfermikitraw_10420:HG3_Ill_150bpfermikitraw_10135:HG2_PB_pbsv_7788:HG2_Ill_svaba_9919:HG2_Ill_Krunchall_11009:HG2_Ill_GATKHC_12811:HG2_Ill_GATKHCSBGrefine_5371:HG2_Ill_250bpfermikitraw_10733:HG3_PB_assemblyticsfalcon_24126;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10733:HG2_Ill_GATKHCSBGrefine_5371:HG2_Ill_GATKHC_12811:HG2_Ill_Krunchall_11009:HG2_Ill_svaba_9919:HG2_PB_pbsv_7788:HG3_Ill_150bpfermikitraw_10135:HG3_Ill_250bpfermikitraw_10420:HG3_Ill_GATKHCSBGrefine_5288:HG3_Ill_GATKHC_12785:HG3_Ill_Krunchall_10728:HG3_Ill_svaba_10007:HG3_PB_pbsv_7558:HG4_Ill_150bpfermikitraw_10294:HG4_Ill_250bpfermikitraw_10741:HG4_Ill_GATKHCSBGrefine_5450:HG4_Ill_GATKHC_12885:HG4_Ill_Krunchall_11344:HG4_Ill_svaba_10044:HG4_PB_assemblyticsfalcon_23720:HG4_PB_pbsv_7827;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.097561;PBcalls=10;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=3568;DistForward=2715;DistMin=2715;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=119;REFWIDENED=7:1118558-1118735;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:31:0|1:22:4:2:25:./.:0:0:0:0:0/1:17:24:./.:.:.:.:.:.
chr7	1121332	HG2_10X_SVrefine210Xhap12_5543	CGCAGCCTGGGGGAGGGACAGGGAGGCCTCTCGAACCCATGGCTTTCTTCTGCCCACT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5543:HG4_Ill_Spiral_643:HG4_PB_pbsv_7828:HG2_PB_pbsv_7789:HG2_PB_HySA_14232:HG3_PB_pbsv_7559:HG4_Ill_svaba_10045:HG4_Ill_manta_1928:HG4_Ill_SVrefine2DISCOVARDovetail_5669:HG4_Ill_Krunchall_11345:HG4_Ill_GATKHCSBGrefine_5451:HG4_Ill_250bpfermikitraw_10742:HG4_Ill_150bpfermikitraw_10295:HG3_PB_assemblyticsfalcon_24127:HG3_PB_SVrefine2PBcRDovetail_3553:HG3_PB_HySA_11844:HG3_Ill_svaba_10008:HG3_Ill_manta_1827:HG3_Ill_Krunchall_10729:HG3_Ill_GATKHCSBGrefine_5289:HG3_Ill_250bpfermikitraw_10421:HG3_Ill_150bpfermikitraw_10136:HG2_PB_SVrefine2PBcRplusDovetail_10049:HG2_PB_SVrefine2PB10Xhap12_5648:HG2_PB_SVrefine2Falcon2Bionano_3827:HG2_Ill_svaba_9920:HG2_Ill_scalpel_7562:HG2_Ill_manta_2236:HG2_Ill_SpiralSDKrefine_15455:HG2_Ill_SVrefine2DISCOVARplusDovetail_11767:HG2_Ill_Krunchall_11010:HG2_Ill_GATKHCSBGrefine_5372:HG2_Ill_250bpfermikitraw_10734:HG2_Ill_150bpfermikitraw_10091;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5543:HG4_Ill_svaba_10045:HG4_Ill_manta_1928:HG4_Ill_SVrefine2DISCOVARDovetail_5669:HG4_Ill_Krunchall_11345:HG4_Ill_GATKHCSBGrefine_5451:HG4_Ill_250bpfermikitraw_10742:HG4_Ill_150bpfermikitraw_10295:HG3_PB_assemblyticsfalcon_24127:HG3_PB_SVrefine2PBcRDovetail_3553:HG3_PB_HySA_11844:HG3_Ill_svaba_10008:HG3_Ill_manta_1827:HG3_Ill_Krunchall_10729:HG3_Ill_GATKHCSBGrefine_5289:HG3_Ill_250bpfermikitraw_10421:HG3_Ill_150bpfermikitraw_10136:HG2_PB_SVrefine2PBcRplusDovetail_10049:HG2_PB_SVrefine2PB10Xhap12_5648:HG2_PB_SVrefine2Falcon2Bionano_3827:HG2_Ill_svaba_9920:HG2_Ill_scalpel_7562:HG2_Ill_manta_2236:HG2_Ill_SpiralSDKrefine_15455:HG2_Ill_SVrefine2DISCOVARplusDovetail_11767:HG2_Ill_Krunchall_11010:HG2_Ill_GATKHCSBGrefine_5372:HG2_Ill_250bpfermikitraw_10734:HG2_Ill_150bpfermikitraw_10091;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.0512821;PBcalls=10;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=2715;DistForward=-6;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=53;REFWIDENED=7:1121333-1121442;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3608.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:0|1:28:3:2:29:./.:0:0:0:0:0/1:28:22:./.:.:.:.:.:.
chr7	1199092	HG2_PB_SVrefine2PB10Xhap12_5653	TCCCAGCAGACAGGCCGGACCCCCAGCAGCCAGACCCCGGCAGGCCCGGTCCCCAGCAGACAGCCGGACCCCCAACAGCCAGACCCCGGCAGGCCCGGTCCCCAGCAGACAGGCCGGACCCCCAACAGCCAGACCCCGGCAGGCCCGGTCCCCAGCAGACAGGCCGGACCCCCAGCAGCCAGACCCCGGCAGGCCCGGTC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11770:HG4_10X_allpass_1524:HG2_Ill_SpiralSDKrefine_15458:HG2_10X_allpass_1301:HG4_PB_pbsv_7835:HG2_PB_pbsv_7797:HG4_PB_SVrefine2PBcRDovetail_3846:HG4_PB_SVrefine2Falcon1Dovetail_4766:HG4_Ill_SVrefine2DISCOVARDovetail_5673:HG3_PB_pbsv_7566:HG3_PB_SVrefine2PBcRDovetail_3558:HG3_Ill_SVrefine2DISCOVARDovetail_5862:HG2_PB_SVrefine2PBcRplusDovetail_10055:HG2_PB_SVrefine2PB10Xhap12_5653:HG2_PB_SVrefine2Falcon2Bionano_3832:HG2_PB_SVrefine2Falcon1plusDovetail_10826;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11770:HG4_PB_SVrefine2PBcRDovetail_3846:HG4_PB_SVrefine2Falcon1Dovetail_4766:HG4_Ill_SVrefine2DISCOVARDovetail_5673:HG3_PB_pbsv_7566:HG3_PB_SVrefine2PBcRDovetail_3558:HG3_Ill_SVrefine2DISCOVARDovetail_5862:HG2_PB_SVrefine2PBcRplusDovetail_10055:HG2_PB_SVrefine2PB10Xhap12_5653:HG2_PB_SVrefine2Falcon2Bionano_3832:HG2_PB_SVrefine2Falcon1plusDovetail_10826;NumExactMatchSVs=11;ClusterMaxShiftDist=0.01;ClusterMaxSizeDiff=0.01;ClusterMaxEditDist=0.015;PBcalls=10;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-199;DistBack=3044;DistForward=-162;DistMin=-162;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=184;REFWIDENED=7:1199093-1199475;PctSeqSimilarity=0.9548;PctSizeSimilarity=0.9256;PctRecOverlap=0.0463;SizeDiff=-16;StartDistance=-190;EndDistance=-206;GTMatch=0;TruScore=64;MatchId=3610.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:0|1:26:0:0:27:./.:0:0:0:0:./.:5:4:./.:.:.:.:6835:.
chr7	1264467	HG2_Ill_SVrefine2DISCOVARplusDovetail_11772	ATGGATGAGTGAGTGAATGAATGAATGAATGAATGAATGAATCCCCCTGCCCGTAAATAACAGAAGAGCTGCGTCCCGGTGCCGGGGGTTGGAGCGGAAGGAGGGGCAGGGGAGAGGGAGGGAGGGATGGATGGATGAGTGAGTGAGTGAGTGAGTGAGTGAG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11772:HG2_PB_HySA_14251:HG4_PB_HySA_11476:HG2_PB_pbsv_7800:HG4_PB_pbsv_7838:HG4_Ill_GATKHC_12892:HG4_Ill_GATKHCSBGrefine_5458:HG2_Ill_SpiralSDKrefine_15459:HG2_Ill_GATKHC_12819:HG2_Ill_GATKHCSBGrefine_5379:HG2_PB_SVrefine2Falcon1plusDovetail_10828:HG4_PB_SVrefine2PBcRDovetail_3848:HG4_Ill_SVrefine2DISCOVARDovetail_5674:HG2_PB_SVrefine2PBcRplusDovetail_10057:HG2_PB_SVrefine2PB10Xhap12_5655;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11772:HG4_PB_SVrefine2PBcRDovetail_3848:HG4_Ill_SVrefine2DISCOVARDovetail_5674:HG2_PB_SVrefine2PBcRplusDovetail_10057:HG2_PB_SVrefine2PB10Xhap12_5655;NumExactMatchSVs=5;ClusterMaxShiftDist=0.173333;ClusterMaxSizeDiff=0.173333;ClusterMaxEditDist=0.226667;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-162;DistBack=-242;DistForward=-106;DistMin=-242;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=153;REFWIDENED=7:1264468-1264782;PctSeqSimilarity=0.97;PctSizeSimilarity=0.9753;PctRecOverlap=0.681;SizeDiff=4;StartDistance=-52;EndDistance=-48;GTMatch=0;TruScore=87;MatchId=3611.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:24:./.:15:7:9:14:./.:0:0:0:0:0/1:32:21:./.:.:.:.:.:.
chr7	1320058	HG2_PB_SVrefine2PB10Xhap12_5661	AAGGAAGAAGAAGAAGGAAGAAGGAGGAAGGAAGAAGGAAGAAGGAAGAAAGAAGAAGGAAGAAGGAGGAAGGAGGAAGAAGAAGGAAGAAGGAGGAAGGAGGAAGGAGGAAGAAGAAGGAGGAAGGAAGAAGAAGGAGGAAGGAGGAAGAAGGAGGAAGGAGGAAGAAGGAAGAAGAAGGGAGAAGGAAGAAGGAGGAAGGAGGAAGAAGGAAGAAGAAGGTAGAAGGAGGAAGGAGGAAGAAGGAAGAAGGAGGGAGGAAGAAGGAAGAAGAAGGAAGAAGGAGGAAGGAGGAAGAAGGAAGAAGAAGGAAGAAGGAGGGAGGAAGAAGGAAGAAGGAAGAAGAAGGAAGAAGGAGGAAGGAGGAAGAAGGAAGAAGAAGGAAGAAGGAGGAAGGAGGAAGAAGGAAGAAGAAGG	A	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_5863:HG2_PB_HySA_14261:HG4_Ill_GATKHCSBGrefine_5462:HG2_Ill_GATKHCSBGrefine_5383:HG2_Ill_tnscope_899:HG3_PB_pbsv_7573:HG4_PB_assemblyticsfalcon_23730:HG4_PB_SVrefine2Falcon1Dovetail_4768:HG3_PB_SVrefine2PBcRDovetail_3560:HG4_PB_SVrefine2PBcRDovetail_3850:HG2_Ill_SVrefine2DISCOVARplusDovetail_11773:HG4_10X_allpass_1525:HG2_PB_pbsv_7805:HG4_Ill_SVrefine2DISCOVARDovetail_5675:HG2_PB_SVrefine2PBcRplusDovetail_10061:HG2_PB_SVrefine2PB10Xhap12_5661:HG2_PB_SVrefine2Falcon1plusDovetail_10833:HG2_10X_SVrefine210Xhap12_5553:HG4_PB_pbsv_7843:HG2_PB_SVrefine2Falcon2Bionano_3836:HG2_10X_SVrefine210Xhap12_5552:HG2_PB_SVrefine2PB10Xhap12_5660;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5553:HG2_PB_SVrefine2Falcon1plusDovetail_10833:HG2_PB_SVrefine2PB10Xhap12_5661:HG2_PB_SVrefine2PBcRplusDovetail_10061:HG4_Ill_SVrefine2DISCOVARDovetail_5675;NumExactMatchSVs=5;ClusterMaxShiftDist=0.367021;ClusterMaxSizeDiff=0.367021;ClusterMaxEditDist=0.369681;PBcalls=13;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-416;DistBack=3221;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=234;REFWIDENED=7:1320059-1320708;PctSeqSimilarity=0.9133;PctSizeSimilarity=0.9808;PctRecOverlap=0.8129;SizeDiff=8;StartDistance=-78;EndDistance=-70;GTMatch=1;TruScore=90;MatchId=3612.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:1:18:0:28:./.:0:0:0:0:0/1:24:6:0/1:17:3:.:.:.
chr7	1557347	HG2_10X_SVrefine210Xhap12_5560	AACCAATCGTATGATTATTGTTCTTATTTTAAATAGAGACAGGGTCTGGCTTTGTCGCCCAGGCTGCGTAATCATGGCTCACTGCAGCCTCGAACTCCTCAGCTCAAGAAAAGCACGTTCCCGTCTCGGCCTCCCAAGTAGCTGGGACCACAGGTGCACACCACCACACTTCCCTGGTTTTGTTTTGTTTTTGAGATGGAGTTTCGCTCTTGTCGCCCAGGCTGGAGTGCAGTGGCGTAATCTCGGCTCACTGCAACCTCCACCACCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGCCCGGCTAATTTGTGTATGTTTAGTAGAGATGGGGTGTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGAGATCCACCTGCCTTGGCCTCCCAAAGTGCTTGGATTACAGGCATGAGCCACTGTGCCCAGCCCCTGATTTATTTATTTTTTTTGGTAGAGATGGAGTCTTGCTAGGTCGCCTTGGCTGGTCTTGAACTCCTGGCCTGAAGCAATCCTCCTGCCTGGGCCTGCCAAAGTGCTGGGATTGCAGGTGAGAGCCACTGTACCCGGTCGCCATGTGATTACTGAGTTGGAACCTTCACTCCACTCCACCTACCCACTCCCGAACTCCAGGGATGGGGAGCTGAAGATAGGGTTAAATCACAACGGCCAGTGGTTTAACCAAGCATGCGTATGTCATGAGACCTGGATACTGAACTCAGAACCACAGGGCTCAGGGAGTTTCTTTTCTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCACCGAGGCTGGAGTGCAGTGGTGGGATCTCAGCTCACTGCAACCTCTGCCACCCAGGTTCAAGCAATTCTCGTGCCTCAGCCTCCAGAGTAGCTGAGACTACAGGTGCGCACCACCATATCTGGCTAATTTTTGTATTTTTTGTAGAGATGAGGTTTCACCACGTCACCCAGGCTGGCCTTCCAGGTGCACGGGGCTCCTGGATTCAAGCGATCCACTCGCCTCAGCCTCCCAAAGCACTGGAGTTACAGGTGTGAGCCACTGCACCCAGCCACTCAGGGAGCTTCTGAGCTGTATCCTCGTGCCAGTAGGCGAAGCTCCTGGAGAGGGCATGGGTGCCTGTGTGTCCCACTTCCCTGCCTTATGTGGTAAGTCCACATGGCTAGTCCTGAGCTGTACCCCTTATAATAAACTCTAATCACAACTCACAACCCATGAGTTGTCCTGTGATAGCGAATTATCACACTGGATAATGAGTGGGGAGGTCATGGGAAGGCCCACATTTGTCCTCAGCCAAGTGAAGGCCCCCAGACCCCATCCTGAAGCTATCTAGTAGCCTGGGGACCCCTTCTGTGGCTGGCAGCTAAAGTGAGGATAGTGTGGGGGGACCAAGTCCTTAACCTGTGGGTTCCACAGTAACTCCAAGTAGTGACTCGTAGGACACCAGTTGGTGTTGGATGGAGCAGTTTGGAAACAGTCTTTTTGTATTATTTGCAGAGGGATATTTGTGAGCAGTTTAAGGCATATGGTGAACAAGGAAATATCTTCATATAGAAACTAGACGGAAGCATTCTGAGAAATTTCTTTGTGATGTGTGCGTTCATCTCACAGAGTTGAACCTTTCTTTTGATGGAGCAGTTCGGAAACACTCTTTTTGTAGAATCTGCAAATGGATATTTAGAGCGCTTTGAGGACTATGGTGAAAAAGGAAATATCTTCAGATAAAAACTGAAGAGAAGCTTTCTGAGAAACTTCTTTGTGATGTGTGCATTCATCTCACAGAGTTTAACCTTTCTTGGTTAATTTTATGTCAACTTGACGGGGCTAAGGGATGGCAGACAGACGGTATAACAGGTTTTTGTTTGTTTTTTTTTTTTTGAGATAGGGTCTTGCTCTATTGCCCAGGTTGGAGTGCAGTGGTACAATCATAGCTCACTGCAGCCTCGACCTCCTGGGCTCAAGCGATCCTCCCACTTTGGCCTCTTGAGTAGCTGGGACCACAGGCACGCACCACCATGCCTAGCTAATTTTTTGAATACTGTTTTTTTTTTAATTGAGATGGAGTCTCACTACATAGCCCAGATTGGAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCCGCCTCCCCATTTCAAGCGATTTTCCTCTCTCATCCTCCCGAGTAGCTGGGGTTACAGGTGCATGCCACCACGCCAGGCTAATTTTTGTATTCTTTGTAGAGTAGCTTTTACCATGTTTGCCAGGCTGGTCTTGAACTCCTGACTTCAAGTGATCTGCCTGTGTCAGCCTCCCAAATGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCCATTTTTTGATACTTTTTTAGAGATGGGGTCTCATTATGTTGCCCAGCTTGGTCTTGACCTCCCAGGCTCAAGCTGTCCTTCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCCCTAGCCACTGCACCTGGCCTAAAACATTCTTTCTTGGGGTGTCCATGAGGGTGTCTCTGGAAGAGATCAACAGTAGATCAGTGGACCCAGTGAAGAGGCGCCCCCCGTCCCCAGTGAGAGCAGGTAACATCCGATCCACGGAGGGTCCAACTGGAACAGAAGGTGGAGGAAGGCTGACTTCTCTCTCTCTCCTTCTCCTGCCCTTGGTCATGAGAGCTGCTGGTTCTTGGGCTTCTGGATCTGGGACTTTCCCCAGTTCCCCCTTGGGCCTTCATCCTCAGACTAGGATTTCCACCATCACCTCCCCTGGCTCTCAGGCCTTTGTGCGCAGGGGAGTTTCATCAGCAGCGTTCTGGGATCTCCGGGTTGCGGACGGACTGCATGAAGCGATTCCTCATAATACGTCTCCCCACATCCCTCTCTCTGCGTCCTCTTGCGTCTGTTTTTCTGGAGACCTCTGACTCATGCAGTTGGTGTTTTGAAAAAACAAACAATTGCCTTTCATGGACCCAACCCTGGACGTCCCATGACATCACCGTCATTGTCCCCTGCTGGCCAAGGCTGTCGTAAGTCGGCCCAGGTTCACGGGGTGAGGGCCCTACTCGGCCTCTTGCTGGAAGAGTGGTGAGGTCACCGTAATGAGAACGTGAGGACAGGAGAGATTGCTACAGCCCTCTCTGGAAAATGCCATGTGTGACATCATGAAAGGTGACGTGGCTGTTGCCCAGGCTGTGGACCGCAAATGTCCGGGAATGAGGCATGTCTCCCGGGTGGTGGACTCCTGGGCGGTTTCAGTCTGGGGCGATTATGAACAAGGCTAGGACAAGCCTGATTTCACCTGCACGCACGTCTATGGGCCACGGTCCTGGCTCTCTGGTCCTCCTGGGAGACCACAATGCTGTTGTATTAGTTTGTTCTCATGCTGCTGAAAAAGACATACCCTGGTTGGGCACAGTGGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCTGAGGCAGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTACAAATACAAAAATTAGCCAGGCATGGTGGTGCACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGTGGAGGTTACAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGCGACAGAGTAAGACTCCATCTCAAAAAAAAAAAAAAAGACATACCTGAGTCTGGATAATTTATAAAGAAAAAGAGGTTTAATAAACTCACAGTTTCACGTGTCTGGGGAGGCCTCACAATCATGGCGGAAGGCAGAAGGCGCATCTCACGTGGTGGCAGACAAGAGACAGAATGAGAGTCAGGCCCAAGGGGGTTTCCCCTGATAAAACCATCAGATCTCGTGAGATTTATTCACTACCACGAGAACAGTGTGGGGGAAACCACCTCCGTGATTCAATTACCTCCCACAGGGTCCCTCCCACAACATGGGGAAATTACGGGAGCTACAACTCAAGATGGGATTTGGGTGGGGACACAGCCGAACCGTATTGGCTGTCTCGCCAGGCCCTTTGGAAGAGTCTAATGGAGGAATGTGGAATACCTGACCCAGTGACTGGCACCCAAAAGAAACTCAACCTTGGCAGCTCTTAATTGGCTTCTTGCTGTTGTCTGAGCATGAGGGAAAGGCTGTCACAGAGGGACTTGGGCTTCCCCGGAACAGGTGCCCCAACCCCAGCCCGTGGGTGGAAGATTCTTTGCTGTGGGTCTGTCCTGTGCACGCAGGTGTTGACCAGCCTCCCTGGCTCCCGCTTACTCCACGCCAGCAGCAACTCCCTGTTAGAGAAAAAGAAGACATCATTCAATGATGCTTGTGGAAGATGGGAAGGCAGCCTGGAGCCGTGGGTGATGCCTGTGATCCCAGCCCTTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCTCAGGAGGTCGAGGCTGCAGTGAGTGATGATCATGCTGCTGCACCTTAGCCTGGGCAATAGAGTGAGACCCTGTCTTTCTCAACACAAAATAAAAAACAAAAAAATTAGGCTAGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGAGAGGCCAAGGTGGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCAGTCTCTACTAAAAATACAAAAAAAGTAGCTGGGTGTGGTGTTGGGCACCTGTAATCCCAGCTACTCAGAAGGCTGAAGCAGGAGAATCGCTTGAATCTGGGAGGCGGAGTTTGCAGTGAGCTGAGATCACGCCATTGCACTCTAGCCTGGGTGACAGAACGAGACTCCGTCTCAAAAAAAAAGCAAAGAAAGAGCCAGAGAAGCCTGATTGGGTTTTGCTCCAGGAGAGAAATTTGGTCACCTCCCCCACCACCGGCATGACAACCAAGGATGCAGGAAGCTGTCCAGGCCGAGGGACCCCCAGAGGCCAGGTCACCACTGGGTGGGAACTACTGTGTTTTTGTTTGTTTTGAGTTTTTTTTTTGGAGACAGGGTCTCGTTCTGGCACCCAGGCTGGAGTGCAATGGCGCCATCGTAGCTCGGCTAATCTTTGCATTTTTAGTAGAGTCGGGGTTTCACCATGTTGGCCGGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCACCTCGGCCTCCTAAAGTCCTGGGCGTGAGCCATTGCGCCCAGCCGGTCTTTTCATTTGAGAATGCTTTGCAGTTTACAACGAACTTCCCCGTGTCTGGCCCTCAAGTCGATCCTGTTTCTATTTTAGGGATGAGGAGCGGGCTCAAGGGTGGCAGCCGTGCCCTCAGGGCAAGTGGTGAAGCATTGGGAAGTCAGATCCCACCTCCTCCCTCTCCGGGGCTCTTTGTACCTCTCCCAGATTTGACATGCACAGGGACCCCTTTTCCCTCTGCTCCCTGCACAGGCAGAGGTCCCCCGCCATCCCAACAGCCCCAGCCCATCACTGCTTCCTGGGAGGAGCCTGAACACTGGGACCCAGCCAGGGGGCCCCCACACTCCTGGGAGGGCCTTTGTTCAGGTGGAGCCTTCCAAGGGCACAGGACTGAGCCTGCCGCACCCAAGACAGCCCTGAGCATGCAGGCGGACCAGGTCGAGGTGTGGCCCTGCCTCTGCCGAGAGAGTCACATCCCCTCTCCTCCTCACGGGGGCAGGGAGTGCTGGAGACGAAGGGGTGCCGCTGAGCCCTGCCGTCCTGCAGAGAAGCATGCATCGTGTGTGGCGGTCAGCAAGCACCTGCCTGCAGAGGCTGCCCCTTCCCGAGGCGTGGGGTGCAGACACTGGGCCCCCTTTAGCTCCCGGGGAGCCACGCTGAACTTCCCGAGCTCGGGGTGGGATGTGGCCGGGGGTCCTGAAGTCCAGCCTGTTCCGGGCTCCAGTCTCCACTTTTCTGGGATCTGAGTCCCTGGGGGAGAGCCTGTGGGCATCCTGAGGGTAGAACTGTTGGGGCCACCTCTCACACGCCATGCTCAGGGCTCCTGCCTGTCTTCTCCCTGCAGTAGAATTGATCCTGGTGGTCTCCGTGTCCCTTCCTTTCCCCGACCTCAGCCGGGGCCACCTGAGTCCCCCGGGTTACCCTGCATACCTCCAACTCTCAGGAAGAAGCGAGGGTAGGAGGGACCCCACCCCTCCCGGGGCGCCCCGGG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_7815:HG2_Ill_tnscope_901:HG4_PB_pbsv_7849:HG4_PB_SVrefine2PBcRDovetail_3854:HG4_PB_SVrefine2Falcon1Dovetail_4773:HG4_Ill_SVrefine2DISCOVARDovetail_5682:HG4_Ill_MetaSV_4799:HG2_PB_assemblyticsPBcR_23530:HG2_PB_SVrefine2PBcRplusDovetail_10069:HG2_PB_SVrefine2PB10Xhap12_5669:HG2_PB_SVrefine2Falcon1plusDovetail_10838:HG2_Ill_breakscan11_1137:HG2_Ill_SpiralSDKrefine_15467:HG2_10X_SVrefine210Xhap12_5560:HG2_10X_allpass_1303:HG4_10X_allpass_1526:HG4_PB_assemblyticsfalcon_23739:HG2_PB_assemblyticsfalcon_24308:HG4_Ill_Krunchall_11354:HG2_Ill_MetaSV_4588;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5560:HG2_Ill_SpiralSDKrefine_15467:HG2_Ill_breakscan11_1137:HG2_PB_SVrefine2Falcon1plusDovetail_10838:HG2_PB_SVrefine2PB10Xhap12_5669:HG2_PB_SVrefine2PBcRplusDovetail_10069:HG2_PB_assemblyticsPBcR_23530:HG4_Ill_MetaSV_4799:HG4_Ill_SVrefine2DISCOVARDovetail_5682:HG4_PB_SVrefine2Falcon1Dovetail_4773:HG4_PB_SVrefine2PBcRDovetail_3854:HG4_PB_pbsv_7849;NumExactMatchSVs=12;ClusterMaxShiftDist=0.000640718;ClusterMaxSizeDiff=0.000640718;ClusterMaxEditDist=0.000640718;PBcalls=10;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6243;DistBack=11013;DistForward=-6243;DistMin=-6243;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:1557348-1563590;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:32:1|0:0:18:41:0:./.:0:0:0:0:0/1:61:17:0/1:375:195:6473:.:.
chr7	1565852	HG4_PB_assemblyticsfalcon_23740	AGGGGAGGGGAGGAGGAGAAGAAGAAGAAGAAGGGGGGGGAAAGGAGGAGAAGGAGAGGGAGGAGGAGTGAGAGGAGAAGGAGAAGAG	C	10	PASS	ClusterIDs=HG4_PB_pbsv_7850:HG2_PB_pbsv_7816:HG4_PB_assemblyticsfalcon_23740:HG4_PB_SVrefine2Falcon1Dovetail_4774;NumClusterSVs=4;ExactMatchIDs=HG4_PB_assemblyticsfalcon_23740;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0346821;ClusterMaxSizeDiff=0.0346821;ClusterMaxEditDist=0.0462428;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-87;DistBack=-28;DistForward=-77;DistMin=-77;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=131;REFWIDENED=7:1565721-1565937;PctSeqSimilarity=0.9887;PctSizeSimilarity=0.9885;PctRecOverlap=0.5682;SizeDiff=1;StartDistance=37;EndDistance=38;GTMatch=0;TruScore=84;MatchId=3616.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:20:1|0:2:16:21:4:./.:0:0:0:0:./.:2:0:./.:.:.:6473:.:.
chr7	1634487	HG2_PB_HySA_14277	CCATTCTCCCATCCATCCACCCTCCCACCCATCCATCCTCCCATCGATCCATCT	C	10	PASS	ClusterIDs=HG3_PB_pbsv_7585:HG2_PB_HySA_14277:HG2_PB_pbsv_7820:HG2_PB_assemblyticsPBcR_23537:HG2_PB_assemblyticsfalcon_24315:HG2_PB_HySA_14276;NumClusterSVs=6;ExactMatchIDs=HG2_PB_HySA_14277;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0560748;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.0747664;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-53;DistBack=-21;DistForward=2932;DistMin=-21;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:1634486-1634541;PctSeqSimilarity=0.9915;PctSizeSimilarity=0.9811;PctRecOverlap=0.8519;SizeDiff=1;StartDistance=7;EndDistance=8;GTMatch=0;TruScore=94;MatchId=3617.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:31:./.:15:8:1:18:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr7	2240827	HG2_Ill_GATKHC_12848	ACTGCTGGGAAGTCCTCGGAGAGAAGGGCAGGTAGTGGTGGGCTGCCCAGAGGAGGCCTTCAGCTT	A	20	PASS	ClusterIDs=HG4_PB_HySA_11507:HG2_PB_HySA_14297:HG2_PB_assemblyticsfalcon_24334:HG4_PB_pbsv_7869:HG4_PB_SVrefine2Falcon1Dovetail_4791:HG4_Ill_svaba_10075:HG4_Ill_scalpel_7431:HG4_Ill_Krunchall_11365:HG4_Ill_GATKHC_12918:HG4_Ill_GATKHCSBGrefine_5479:HG4_Ill_Cortex_3350:HG4_Ill_250bpfermikitraw_10761:HG4_Ill_150bpfermikitraw_10317:HG4_CG_vcfBeta_5123:HG2_PB_pbsv_7836:HG2_PB_SVrefine2PBcRplusDovetail_10084:HG2_PB_SVrefine2PB10Xhap12_5685:HG2_PB_SVrefine2Falcon2Bionano_3854:HG2_PB_SVrefine2Falcon1plusDovetail_10852:HG2_Ill_svaba_9958:HG2_Ill_manta_2241:HG2_Ill_breakscan11_1140:HG2_Ill_SpiralSDKrefine_15480:HG2_Ill_SVrefine2DISCOVARplusDovetail_11788:HG2_Ill_Krunchall_11037:HG2_Ill_GATKHC_12848:HG2_Ill_GATKHCSBGrefine_5396:HG2_Ill_Cortex_8144:HG2_Ill_250bpfermikitraw_10759:HG2_Ill_150bpfermikitraw_10115:HG2_CG_vcfBeta_4577:HG2_10X_allpass_1305:HG2_10X_SVrefine210Xhap12_5585;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5585:HG2_10X_allpass_1305:HG2_CG_vcfBeta_4577:HG2_Ill_150bpfermikitraw_10115:HG2_Ill_250bpfermikitraw_10759:HG2_Ill_Cortex_8144:HG2_Ill_GATKHCSBGrefine_5396:HG2_Ill_GATKHC_12848:HG2_Ill_Krunchall_11037:HG2_Ill_SVrefine2DISCOVARplusDovetail_11788:HG2_Ill_SpiralSDKrefine_15480:HG2_Ill_breakscan11_1140:HG2_Ill_manta_2241:HG2_Ill_svaba_9958:HG2_PB_SVrefine2Falcon1plusDovetail_10852:HG2_PB_SVrefine2Falcon2Bionano_3854:HG2_PB_SVrefine2PB10Xhap12_5685:HG2_PB_SVrefine2PBcRplusDovetail_10084:HG2_PB_pbsv_7836:HG4_CG_vcfBeta_5123:HG4_Ill_150bpfermikitraw_10317:HG4_Ill_250bpfermikitraw_10761:HG4_Ill_Cortex_3350:HG4_Ill_GATKHCSBGrefine_5479:HG4_Ill_GATKHC_12918:HG4_Ill_Krunchall_11365:HG4_Ill_scalpel_7431:HG4_Ill_svaba_10075:HG4_PB_SVrefine2Falcon1Dovetail_4791:HG4_PB_pbsv_7869;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0746269;ClusterMaxSizeDiff=0.0746269;ClusterMaxEditDist=0.0746269;PBcalls=10;Illcalls=19;TenXcalls=2;CGcalls=2;PBexactcalls=7;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=2;HG2count=21;HG3count=0;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-65;DistBack=31359;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:2240828-2240894;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:23:0|1:26:2:1:21:./.:0:0:0:0:0/1:26:25:./.:.:.:.:.:.
chr7	2264850	HG2_Ill_250bpfermikitraw_10760	GCCTGGCAGGTACCGTGCACAGCCCCCTTGCTCCCAGGGACTGGGATCTGATTTCTTAAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5586:HG2_PB_pbsv_7838:HG4_PB_assemblyticsfalcon_23767:HG4_PB_pbsv_7871:HG3_PB_pbsv_7616:HG4_Ill_svaba_10077:HG3_Ill_svaba_10055:HG3_Ill_Krunchall_10757:HG3_Ill_GATKHC_12827:HG3_Ill_GATKHCSBGrefine_5318:HG3_Ill_250bpfermikitraw_10458:HG3_Ill_150bpfermikitraw_10165:HG2_Ill_svaba_9960:HG3_PB_HySA_11885:HG3_PB_assemblyticsfalcon_24182:HG2_PB_HySA_14298:HG4_PB_HySA_11510:HG4_Ill_svaba_10076:HG4_Ill_scalpel_7432:HG4_Ill_manta_1931:HG4_Ill_Krunchall_11366:HG4_Ill_GATKHC_12919:HG4_Ill_GATKHCSBGrefine_5480:HG4_Ill_250bpfermikitraw_10763:HG4_Ill_150bpfermikitraw_10318:HG3_Ill_svaba_10054:HG2_Ill_svaba_9959:HG2_Ill_scalpel_7576:HG2_Ill_manta_2242:HG2_Ill_SpiralSDKrefine_15481:HG2_Ill_Krunchall_11038:HG2_Ill_GATKHC_12849:HG2_Ill_GATKHCSBGrefine_5397:HG2_Ill_250bpfermikitraw_10760:HG2_Ill_150bpfermikitraw_10116:HG4_Ill_Spiral_645:HG2_PB_SVrefine2PBcRplusDovetail_10086:HG2_PB_SVrefine2PB10Xhap12_5687:HG2_PB_SVrefine2Falcon2Bionano_3856:HG2_PB_SVrefine2Falcon1plusDovetail_10853;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10116:HG2_Ill_250bpfermikitraw_10760:HG2_Ill_GATKHCSBGrefine_5397:HG2_Ill_GATKHC_12849:HG2_Ill_Krunchall_11038:HG2_Ill_SpiralSDKrefine_15481:HG2_Ill_manta_2242:HG2_Ill_scalpel_7576:HG2_Ill_svaba_9959:HG3_Ill_svaba_10054:HG4_Ill_150bpfermikitraw_10318:HG4_Ill_250bpfermikitraw_10763:HG4_Ill_GATKHCSBGrefine_5480:HG4_Ill_GATKHC_12919:HG4_Ill_Krunchall_11366:HG4_Ill_manta_1931:HG4_Ill_scalpel_7432:HG4_Ill_svaba_10076;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0826446;ClusterMaxSizeDiff=0.0826446;ClusterMaxEditDist=0.209677;PBcalls=12;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=13;NumTechs=3;NumTechsExact=1;SVLEN=-60;DistBack=14772;DistForward=-22;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=119;REFWIDENED=7:2264830-2265008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:36:0|1:37:3:1:33:./.:0:0:0:0:0/1:32:19:./.:.:.:.:.:.
chr7	4931416	HG3_Ill_150bpfermikitraw_10195	CATCTATCTATCTATCTATCTATCTACCTACCTATCTATGTATCTATCTATCTATCTAATCTATCATCTATCTATCT	C	20	PASS	ClusterIDs=HG2_Ill_GATKHC_12899:HG3_Ill_scalpel_7712:HG3_Ill_manta_1840:HG3_Ill_Krunchall_10784:HG3_Ill_250bpfermikitraw_10484:HG3_Ill_150bpfermikitraw_10195:HG2_Ill_Krunchall_11071:HG2_10X_allpass_1310:HG2_Ill_manta_2249:HG3_Ill_GATKHC_12870;NumClusterSVs=10;ExactMatchIDs=HG2_10X_allpass_1310:HG2_Ill_Krunchall_11071:HG3_Ill_150bpfermikitraw_10195:HG3_Ill_250bpfermikitraw_10484:HG3_Ill_Krunchall_10784:HG3_Ill_manta_1840:HG3_Ill_scalpel_7712;NumExactMatchSVs=7;ClusterMaxShiftDist=0.169014;ClusterMaxSizeDiff=0.169014;ClusterMaxEditDist=0.169014;PBcalls=0;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-76;DistBack=41;DistForward=-68;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=25;REFWIDENED=7:4931415-4931518;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3621.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:11:./.:23:7:0:4:./.:0:0:0:0:0/1:17:25:./.:.:.:.:.:.
chr7	7542309	HG3_Ill_manta_1843	AGATATTCCCTTCCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_566:HG3_Ill_Krunchall_10806:HG2_Ill_Krunchall_11090:HG3_Ill_Spiral_8467:HG2_PB_pbsv_7888:HG3_PB_pbsv_7672:HG2_Ill_breakscan11_1147:HG2_Ill_tnscope_903:HG2_Ill_MetaSV_4605:HG4_PB_SVrefine2Falcon1Dovetail_4819:HG3_PB_SVrefine2Falcon1Dovetail_4755:HG3_Ill_scalpel_7730:HG3_Ill_manta_1843:HG3_Ill_MetaSV_4775:HG3_Ill_GATKHCSBGrefine_5347:HG3_10X_allpass_1584:HG2_PB_SVrefine2PB10Xhap12_5724:HG2_PB_SVrefine2Falcon2Bionano_3878:HG2_PB_SVrefine2Falcon1plusDovetail_10883:HG2_Ill_scalpel_7611:HG2_Ill_manta_2254:HG2_Ill_GATKHCSBGrefine_5425:HG2_10X_SVrefine210Xhap12_5625;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5625:HG2_Ill_GATKHCSBGrefine_5425:HG2_Ill_manta_2254:HG2_Ill_scalpel_7611:HG2_PB_SVrefine2Falcon1plusDovetail_10883:HG2_PB_SVrefine2Falcon2Bionano_3878:HG2_PB_SVrefine2PB10Xhap12_5724:HG3_10X_allpass_1584:HG3_Ill_GATKHCSBGrefine_5347:HG3_Ill_MetaSV_4775:HG3_Ill_manta_1843:HG3_Ill_scalpel_7730:HG3_PB_SVrefine2Falcon1Dovetail_4755:HG4_PB_SVrefine2Falcon1Dovetail_4819;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00664452;ClusterMaxSizeDiff=0.00664452;ClusterMaxEditDist=0.00666667;PBcalls=7;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-300;DistBack=-172;DistForward=-160;DistMin=-172;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=7:7542310-7542627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3623.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:41:0|1:42:2:2:36:./.:0:0:0:0:0/1:37:30:0/1:26:7:.:.:.
chr7	7583515	HG4_PB_SVrefine2Falcon1Dovetail_4820	AGAGACTATACCTAACTTCCAGGCTGTGCGGTGCGCTCTTGCCTCTTAAAAGAGTACAGCACACAGGTCTGAGAATTGGTTCTGCCACTTTTTGACGCTGGACCTGTAAGTTCTGAAAGCCTTACACAGTTTCCACATCCGCAAGTGAAGACTATGAGGAGGAGCCCAATAAAAATAAGGATAGCAACAGCAGCATCCGAATCAACAACAAAAATAACACCTCTCTCACAGTGTTGTGGTGAGTATCAAAAGAGCTTTGTAAACAGTAAAAATCCATAAATGTTCTGTAATTTCAAAAACAACTTAAAAGACAAACTAGTAAAAGAACAGAGATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCTGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATTCCAGAATCTCTGGGATGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGCAGAAATGAATAAATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGAGCTGAAATTGTGGCAATGATCAATAGTTTACCAACCAAGAAGAGTCCAGGACCAGATGGATTCACAGCCAAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCCAACTCATTTTATGAGGCCAGCATCATTCTGATATCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAAACGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCTCTG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_7889:HG4_10X_allpass_1532:HG2_PB_PB10Xdip_28678:HG3_Ill_MetaSV_4776:HG2_Ill_MetaSV_4606:HG4_PB_HySA_11600:HG2_PB_HySA_14405:HG2_PB_assemblyticsfalcon_24405:HG2_PB_assemblyticsPBcR_23621:HG4_PB_assemblyticsfalcon_23837:HG4_PB_SVrefine2PBcRDovetail_3886:HG4_PB_SVrefine2Falcon1Dovetail_4820:HG3_PB_pbsv_7673:HG3_PB_assemblyticsfalcon_24249:HG3_PB_SVrefine2PBcRDovetail_3616:HG3_PB_SVrefine2Falcon1Dovetail_4756:HG2_PB_SVrefine2PBcRplusDovetail_10114:HG2_PB_SVrefine2PB10Xhap12_5725:HG2_PB_SVrefine2Falcon1plusDovetail_10884:HG2_10X_SVrefine210Xhap12_5626:HG4_Ill_MetaSV_4813;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5626:HG2_PB_SVrefine2Falcon1plusDovetail_10884:HG2_PB_SVrefine2PB10Xhap12_5725:HG2_PB_SVrefine2PBcRplusDovetail_10114:HG3_PB_SVrefine2Falcon1Dovetail_4756:HG3_PB_SVrefine2PBcRDovetail_3616:HG3_PB_assemblyticsfalcon_24249:HG3_PB_pbsv_7673:HG4_PB_SVrefine2Falcon1Dovetail_4820:HG4_PB_SVrefine2PBcRDovetail_3886:HG4_PB_assemblyticsfalcon_23837;NumExactMatchSVs=11;ClusterMaxShiftDist=0.123119;ClusterMaxSizeDiff=0.123119;ClusterMaxEditDist=0.123119;PBcalls=16;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-1373;DistBack=-862;DistForward=-1373;DistMin=-1373;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:7583516-7584889;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3624.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:36:0|1:23:0:0:34:./.:0:0:0:0:0/1:63:9:0/1:127:57:1404:.:.
chr7	8319685	HG3_Ill_GATKHC_12901	TCATATATATGTGTGTATATATATGTGTGTGTGTGTATATATATACACACACA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_7677:HG3_Ill_svaba_10109:HG3_Ill_scalpel_7734:HG3_Ill_manta_1844:HG3_Ill_Krunchall_10811:HG3_Ill_GATKHC_12901:HG3_Ill_GATKHCSBGrefine_5353:HG3_Ill_250bpfermikitraw_10511:HG3_Ill_150bpfermikitraw_10218:HG3_10X_allpass_1585:HG2_PB_pbsv_7893:HG2_Ill_svaba_10018:HG2_Ill_manta_2255:HG2_Ill_SpiralSDKrefine_15528:HG2_Ill_Krunchall_11096:HG2_Ill_GATKHC_12931:HG2_Ill_GATKHCSBGrefine_5431:HG2_Ill_FB_7037:HG2_Ill_250bpfermikitraw_10821:HG2_Ill_150bpfermikitraw_10171:HG2_PB_assemblyticsfalcon_24413;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10171:HG2_Ill_250bpfermikitraw_10821:HG2_Ill_FB_7037:HG2_Ill_GATKHCSBGrefine_5431:HG2_Ill_GATKHC_12931:HG2_Ill_Krunchall_11096:HG2_Ill_SpiralSDKrefine_15528:HG2_Ill_manta_2255:HG2_Ill_svaba_10018:HG2_PB_pbsv_7893:HG3_10X_allpass_1585:HG3_Ill_150bpfermikitraw_10218:HG3_Ill_250bpfermikitraw_10511:HG3_Ill_GATKHCSBGrefine_5353:HG3_Ill_GATKHC_12901:HG3_Ill_Krunchall_10811:HG3_Ill_manta_1844:HG3_Ill_scalpel_7734:HG3_Ill_svaba_10109;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0188679;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0754717;PBcalls=3;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=123099;DistForward=6291;DistMin=6291;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=7:8319684-8319747;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:28:./.:29:9:9:26:./.:0:0:0:0:0/1:38:32:./.:.:.:.:.:.
chr7	8698628	HG4_Ill_SVrefine2DISCOVARDovetail_5725	TATATATATTTTTTTTTTTTTTTGCTAAAACAGAAAAAGTATAAGGTGAATGCCCCAGCAAATGGGTTTGTTTCATGTATCAGGGCCAAGTGACAATTGGCTCTGTGTGGTTATAGTTTTCAGTCCCACTTAGAGGGATGTAGAAGAATCCCAGAAGTTTTCAAAGCTGATTAACAACTTAAAAAGGAAGATTACCAGAGTGCTATTGACAATAACTAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_7924:HG2_PB_pbsv_7895:HG3_PB_pbsv_7681:HG4_PB_HySA_11606:HG4_Ill_Krunchall_11429:HG3_Ill_Krunchall_10814:HG2_Ill_Krunchall_11100:HG2_PB_assemblyticsfalcon_24415:HG2_PB_assemblyticsPBcR_23629:HG4_Ill_MetaSV_4814:HG3_Ill_MetaSV_4779:HG2_PB_HySA_14417:HG2_Ill_MetaSV_4607:HG4_PB_assemblyticsfalcon_23849:HG4_PB_SVrefine2PBcRDovetail_3888:HG4_PB_SVrefine2Falcon1Dovetail_4828:HG4_Ill_svaba_10141:HG4_Ill_scalpel_7478:HG4_Ill_manta_1939:HG4_Ill_SVrefine2DISCOVARDovetail_5725:HG4_Ill_GATKHCSBGrefine_5515:HG4_10X_allpass_1533:HG3_Ill_svaba_10113:HG3_Ill_scalpel_7737:HG3_Ill_manta_1847:HG3_Ill_GATKHCSBGrefine_5356:HG3_10X_allpass_1586:HG2_PB_SVrefine2PBcRplusDovetail_10119:HG2_PB_SVrefine2PB10Xhap12_5730:HG2_PB_SVrefine2Falcon2Bionano_3883:HG2_PB_SVrefine2Falcon1plusDovetail_10888:HG2_Ill_svaba_10021:HG2_Ill_scalpel_7617:HG2_Ill_manta_2256:HG2_Ill_SpiralSDKrefine_15530:HG2_Ill_SVrefine2DISCOVARplusDovetail_11831:HG2_Ill_GATKHCSBGrefine_5432:HG2_10X_allpass_1313:HG2_10X_SVrefine210Xhap12_5627:HG2_Ill_Krunchall_11099;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5627:HG2_10X_allpass_1313:HG2_Ill_GATKHCSBGrefine_5432:HG2_Ill_SVrefine2DISCOVARplusDovetail_11831:HG2_Ill_SpiralSDKrefine_15530:HG2_Ill_manta_2256:HG2_Ill_scalpel_7617:HG2_Ill_svaba_10021:HG2_PB_SVrefine2Falcon1plusDovetail_10888:HG2_PB_SVrefine2Falcon2Bionano_3883:HG2_PB_SVrefine2PB10Xhap12_5730:HG2_PB_SVrefine2PBcRplusDovetail_10119:HG3_10X_allpass_1586:HG3_Ill_GATKHCSBGrefine_5356:HG3_Ill_manta_1847:HG3_Ill_scalpel_7737:HG3_Ill_svaba_10113:HG4_10X_allpass_1533:HG4_Ill_GATKHCSBGrefine_5515:HG4_Ill_SVrefine2DISCOVARDovetail_5725:HG4_Ill_manta_1939:HG4_Ill_scalpel_7478:HG4_Ill_svaba_10141:HG4_PB_SVrefine2Falcon1Dovetail_4828:HG4_PB_SVrefine2PBcRDovetail_3888:HG4_PB_assemblyticsfalcon_23849;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.0277778;PBcalls=14;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=8;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-218;DistBack=3577;DistForward=9058;DistMin=3577;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:8698629-8698848;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3626.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:60:1/1:8:31:0:22:./.:0:0:0:0:1/1:0:35:./.:.:.:.:.:.
chr7	8782970	HG2_Ill_250bpfermikitraw_10825	AAAAAGAGATATACAAATGTTTGGAGACACTTCTAGTTGAAGATTGTATATAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5628:HG2_PB_pbsv_7896:HG4_Ill_svaba_10143:HG4_Ill_manta_1940:HG4_Ill_Krunchall_11431:HG4_Ill_GATKHCSBGrefine_5516:HG4_Ill_250bpfermikitraw_10826:HG4_Ill_150bpfermikitraw_10385:HG2_Ill_svaba_10023:HG2_Ill_manta_2257:HG2_Ill_SpiralSDKrefine_15532:HG2_Ill_Krunchall_11102:HG2_Ill_GATKHCSBGrefine_5433:HG2_Ill_250bpfermikitraw_10825:HG2_Ill_150bpfermikitraw_10175:HG4_Ill_SVrefine2DISCOVARDovetail_5726;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10175:HG2_Ill_250bpfermikitraw_10825:HG2_Ill_GATKHCSBGrefine_5433:HG2_Ill_Krunchall_11102:HG2_Ill_SpiralSDKrefine_15532:HG2_Ill_manta_2257:HG2_Ill_svaba_10023:HG4_Ill_150bpfermikitraw_10385:HG4_Ill_250bpfermikitraw_10826:HG4_Ill_GATKHCSBGrefine_5516:HG4_Ill_Krunchall_11431:HG4_Ill_manta_1940:HG4_Ill_svaba_10143;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0192308;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0384615;PBcalls=1;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-52;DistBack=23208;DistForward=51;DistMin=51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=59;REFWIDENED=7:8782967-8783077;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:16:0|1:36:4:0:12:./.:0:0:0:0:0/1:41:25:./.:.:.:.:.:.
chr7	9634634	HG3_Ill_SVrefine2DISCOVARDovetail_5935	TAGAAAAGAGACTACTGCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGACCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCTAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAATAATAATAATAATTAATAAATAAATAAATAAATAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5631:HG4_Ill_Krunchall_11443:HG3_PB_pbsv_7685:HG3_Ill_Krunchall_10822:HG2_Ill_Krunchall_11113:HG3_PB_assemblyticsfalcon_24267:HG2_PB_assemblyticsPBcR_23636:HG2_Ill_MetaSV_4608:HG4_Ill_MetaSV_4815:HG2_Ill_tnscope_904:HG4_PB_pbsv_7927:HG4_PB_SVrefine2PBcRDovetail_3890:HG4_Ill_GATKHCSBGrefine_5517:HG4_10X_allpass_1534:HG3_PB_SVrefine2PBcRDovetail_3620:HG3_PB_SVrefine2Falcon1Dovetail_4767:HG3_Ill_SVrefine2DISCOVARDovetail_5935:HG3_Ill_MetaSV_4780:HG3_Ill_GATKHCSBGrefine_5357:HG3_10X_allpass_1587:HG2_PB_pbsv_7899:HG2_PB_assemblyticsfalcon_24421:HG2_PB_SVrefine2PBcRplusDovetail_10121:HG2_PB_SVrefine2PB10Xhap12_5732:HG2_PB_SVrefine2Falcon1plusDovetail_10890:HG2_Ill_breakscan11_1148:HG2_10X_allpass_1314;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5631:HG4_PB_pbsv_7927:HG4_PB_SVrefine2PBcRDovetail_3890:HG4_Ill_GATKHCSBGrefine_5517:HG4_10X_allpass_1534:HG3_PB_SVrefine2PBcRDovetail_3620:HG3_PB_SVrefine2Falcon1Dovetail_4767:HG3_Ill_SVrefine2DISCOVARDovetail_5935:HG3_Ill_MetaSV_4780:HG3_Ill_GATKHCSBGrefine_5357:HG3_10X_allpass_1587:HG2_PB_pbsv_7899:HG2_PB_assemblyticsfalcon_24421:HG2_PB_SVrefine2PBcRplusDovetail_10121:HG2_PB_SVrefine2PB10Xhap12_5732:HG2_PB_SVrefine2Falcon1plusDovetail_10890:HG2_Ill_breakscan11_1148:HG2_10X_allpass_1314;NumExactMatchSVs=18;ClusterMaxShiftDist=0.145314;ClusterMaxSizeDiff=0.145314;ClusterMaxEditDist=0.145314;PBcalls=12;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1343;DistBack=4502;DistForward=-1339;DistMin=-1339;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=7:9634635-9635993;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3628.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:28:0|1:35:0:0:28:./.:0:0:0:0:0/1:51:10:0/1:104:43:1370:.:.
chr7	12281703	HG3_Ill_SVrefine2DISCOVARDovetail_5946	TAAAAAAAAATACCCGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAAGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGGGCTTGCAGCGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_23657:HG2_PB_assemblyticsfalcon_24441:HG3_PB_pbsv_7694:HG2_10X_allpass_1318:HG3_PB_HySA_12004:HG2_PB_SVrefine2Falcon1plusDovetail_10897:HG2_PB_SVrefine2PB10Xhap12_5740:HG3_Ill_Spiral_8498:HG3_Ill_MetaSV_4784:HG2_Ill_tnscope_906:HG3_PB_SVrefine2PBcRDovetail_3625:HG3_Ill_manta_1851:HG3_Ill_SVrefine2DISCOVARDovetail_5946:HG3_Ill_GATKHCSBGrefine_5367:HG3_10X_allpass_1592:HG2_Ill_SpiralSDKrefine_15560:HG2_Ill_SVrefine2DISCOVARplusDovetail_11846:HG2_Ill_MetaSV_4611:HG2_Ill_GATKHCSBGrefine_5440:HG2_10X_SVrefine210Xhap12_5638:HG2_PB_pbsv_7909:HG2_Ill_breakscan11_1149:HG2_Ill_Krunchall_11140:HG2_PB_SVrefine2PB10Xhap12_5739:HG2_Ill_Spiral_567;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5638:HG2_Ill_GATKHCSBGrefine_5440:HG2_Ill_MetaSV_4611:HG2_Ill_SVrefine2DISCOVARplusDovetail_11846:HG2_Ill_SpiralSDKrefine_15560:HG3_10X_allpass_1592:HG3_Ill_GATKHCSBGrefine_5367:HG3_Ill_SVrefine2DISCOVARDovetail_5946:HG3_Ill_manta_1851:HG3_PB_SVrefine2PBcRDovetail_3625;NumExactMatchSVs=10;ClusterMaxShiftDist=0.160121;ClusterMaxSizeDiff=0.160121;ClusterMaxEditDist=0.160121;PBcalls=9;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=-160;DistForward=-315;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=7:12281704-12282038;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3629.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:22:0|1:21:0:1:25:./.:0:0:0:0:0/1:27:25:0/1:21:12:.:.:.
chr7	13170700	HG2_Ill_GATKHCSBGrefine_5445	GAGAGAAAGAAAGGAAAAAGGGAAAGGGAGGAAGGAAAGAGAGAGAAAGAAGGAAGGAA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10900:HG4_Ill_svaba_10197:HG4_PB_pbsv_7947:HG4_Ill_svaba_10198:HG4_Ill_scalpel_7506:HG4_Ill_Krunchall_11484:HG4_Ill_GATKHC_13062:HG4_Ill_GATKHCSBGrefine_5534:HG4_Ill_250bpfermikitraw_10876:HG4_Ill_150bpfermikitraw_10435:HG3_PB_HySA_12013:HG3_PB_pbsv_7699:HG2_PB_pbsv_7913:HG2_PB_HySA_14451:HG4_Ill_GATKHCSBGrefine_5533:HG3_Ill_svaba_10158:HG3_Ill_manta_1853:HG3_Ill_Krunchall_10858:HG3_Ill_GATKHCSBGrefine_5373:HG3_Ill_250bpfermikitraw_10552:HG2_Ill_svaba_10066:HG2_Ill_scalpel_7643:HG2_Ill_manta_2262:HG2_Ill_SpiralSDKrefine_15565:HG2_Ill_GATKHCSBGrefine_5445:HG2_Ill_250bpfermikitraw_10866:HG2_Ill_150bpfermikitraw_10217:HG4_Ill_SVrefine2DISCOVARDovetail_5741:HG2_PB_SVrefine2PBcRplusDovetail_10126:HG2_PB_SVrefine2PB10Xhap12_5743:HG2_PB_SVrefine2Falcon2Bionano_3889:HG2_Ill_SVrefine2DISCOVARplusDovetail_11850:HG2_10X_SVrefine210Xhap12_5640:HG3_PB_SVrefine2PBcRDovetail_3629;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10217:HG2_Ill_250bpfermikitraw_10866:HG2_Ill_GATKHCSBGrefine_5445:HG2_Ill_SpiralSDKrefine_15565:HG2_Ill_manta_2262:HG2_Ill_scalpel_7643:HG2_Ill_svaba_10066:HG3_Ill_250bpfermikitraw_10552:HG3_Ill_GATKHCSBGrefine_5373:HG3_Ill_Krunchall_10858:HG3_Ill_manta_1853:HG3_Ill_svaba_10158:HG4_Ill_GATKHCSBGrefine_5533:HG4_Ill_svaba_10197;NumExactMatchSVs=14;ClusterMaxShiftDist=0.119658;ClusterMaxSizeDiff=0.119658;ClusterMaxEditDist=0.273504;PBcalls=10;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-58;DistBack=20168;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=117;REFWIDENED=7:13170662-13170836;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3630.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:56:1/1:6:33:4:25:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr7	13663189	HG4_10X_allpass_1539	GAAATGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTCGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1150:HG3_PB_HySA_12021:HG4_Ill_Krunchall_11491:HG3_PB_pbsv_7704:HG3_Ill_Krunchall_10863:HG3_PB_assemblyticsfalcon_24303:HG2_PB_assemblyticsPBcR_23669:HG4_PB_assemblyticsfalcon_23894:HG2_PB_assemblyticsfalcon_24454:HG4_PB_HySA_11658:HG4_Ill_MetaSV_4822:HG2_PB_HySA_14458:HG2_Ill_tnscope_907:HG2_Ill_MetaSV_4613:HG4_PB_pbsv_7951:HG4_PB_SVrefine2PBcRDovetail_3902:HG4_PB_SVrefine2Falcon1Dovetail_4845:HG4_Ill_scalpel_7513:HG4_Ill_manta_1948:HG4_Ill_SVrefine2DISCOVARDovetail_5745:HG4_Ill_GATKHCSBGrefine_5540:HG4_10X_allpass_1539:HG3_PB_SVrefine2PBcRDovetail_3632:HG3_PB_SVrefine2Falcon1Dovetail_4780:HG3_Ill_scalpel_7763:HG3_Ill_manta_1854:HG3_Ill_SVrefine2DISCOVARDovetail_5951:HG3_Ill_MetaSV_4787:HG3_Ill_GATKHCSBGrefine_5377:HG3_10X_allpass_1594:HG2_PB_pbsv_7919:HG2_PB_SVrefine2PBcRplusDovetail_10128:HG2_PB_SVrefine2PB10Xhap12_5747:HG2_PB_SVrefine2Falcon2Bionano_3892:HG2_PB_SVrefine2Falcon1plusDovetail_10904:HG2_Ill_scalpel_7648:HG2_Ill_manta_2265:HG2_Ill_SVrefine2DISCOVARplusDovetail_11856:HG2_Ill_GATKHCSBGrefine_5449:HG2_10X_allpass_1320:HG2_10X_SVrefine210Xhap12_5643;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5643:HG2_10X_allpass_1320:HG2_Ill_GATKHCSBGrefine_5449:HG2_Ill_SVrefine2DISCOVARplusDovetail_11856:HG2_Ill_manta_2265:HG2_Ill_scalpel_7648:HG2_PB_SVrefine2Falcon1plusDovetail_10904:HG2_PB_SVrefine2Falcon2Bionano_3892:HG2_PB_SVrefine2PB10Xhap12_5747:HG2_PB_SVrefine2PBcRplusDovetail_10128:HG2_PB_pbsv_7919:HG3_10X_allpass_1594:HG3_Ill_GATKHCSBGrefine_5377:HG3_Ill_MetaSV_4787:HG3_Ill_SVrefine2DISCOVARDovetail_5951:HG3_Ill_manta_1854:HG3_Ill_scalpel_7763:HG3_PB_SVrefine2Falcon1Dovetail_4780:HG3_PB_SVrefine2PBcRDovetail_3632:HG4_10X_allpass_1539:HG4_Ill_GATKHCSBGrefine_5540:HG4_Ill_SVrefine2DISCOVARDovetail_5745:HG4_Ill_manta_1948:HG4_Ill_scalpel_7513:HG4_PB_SVrefine2Falcon1Dovetail_4845:HG4_PB_SVrefine2PBcRDovetail_3902:HG4_PB_pbsv_7951;NumExactMatchSVs=27;ClusterMaxShiftDist=0.026465;ClusterMaxSizeDiff=0.026465;ClusterMaxEditDist=0.0265655;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-266;DistBack=33811;DistForward=13466;DistMin=13466;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=7:13663190-13663459;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3631.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:60:1/1:0:41:1:20:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr7	13676922	HG2_Ill_GATKHCSBGrefine_5450	GCTCACACCCCATCAACTACTGCTATTAAACTGTATAATACAGCTCAGCTATCCACAAGAAACAAATAAAAACAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5644:HG4_PB_HySA_11659:HG2_PB_pbsv_7920:HG4_PB_pbsv_7952:HG4_PB_SVrefine2PBcRDovetail_3903:HG4_Ill_svaba_10205:HG4_Ill_SVrefine2DISCOVARDovetail_5746:HG4_Ill_GATKHCSBGrefine_5541:HG4_Ill_250bpfermikitraw_10882:HG2_Ill_svaba_10071:HG2_Ill_manta_2266:HG2_Ill_SpiralSDKrefine_15570:HG2_Ill_GATKHCSBGrefine_5450:HG2_Ill_250bpfermikitraw_10871;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5644:HG4_PB_SVrefine2PBcRDovetail_3903:HG4_Ill_svaba_10205:HG4_Ill_SVrefine2DISCOVARDovetail_5746:HG4_Ill_GATKHCSBGrefine_5541:HG4_Ill_250bpfermikitraw_10882:HG2_Ill_svaba_10071:HG2_Ill_manta_2266:HG2_Ill_SpiralSDKrefine_15570:HG2_Ill_GATKHCSBGrefine_5450:HG2_Ill_250bpfermikitraw_10871;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0246914;ClusterMaxSizeDiff=0.0246914;ClusterMaxEditDist=0.0246914;PBcalls=4;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-80;DistBack=13466;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=82;REFWIDENED=7:13676923-13677084;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3632.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:19:./.:30:7:13:10:./.:0:0:0:0:0/1:24:9:./.:.:.:.:.:.
chr7	14227988	HG3_Ill_manta_1855	TAAAAGATCCCCAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCTAGATCCCGCCACTGCACTCCAGCCTGGGCGACAAAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_7921:HG2_PB_HySA_14465:HG2_PB_assemblyticsPBcR_23675:HG2_PB_assemblyticsfalcon_24458:HG3_Ill_Krunchall_10873:HG3_PB_pbsv_7705:HG3_Ill_MetaSV_4788:HG2_Ill_tnscope_908:HG2_Ill_MetaSV_4614:HG4_PB_SVrefine2Falcon1Dovetail_4846:HG3_PB_assemblyticsfalcon_24308:HG3_PB_SVrefine2Falcon1Dovetail_4781:HG3_Ill_manta_1855:HG3_Ill_GATKHCSBGrefine_5378:HG3_10X_allpass_1595:HG2_PB_SVrefine2PBcRplusDovetail_10130:HG2_PB_SVrefine2PB10Xhap12_5749:HG2_PB_SVrefine2Falcon1plusDovetail_10905:HG2_Ill_manta_2267:HG2_Ill_GATKHCSBGrefine_5451:HG2_10X_allpass_1321:HG2_10X_SVrefine210Xhap12_5647:HG3_PB_SVrefine2PBcRDovetail_3633;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5647:HG2_10X_allpass_1321:HG2_Ill_GATKHCSBGrefine_5451:HG2_Ill_manta_2267:HG2_PB_SVrefine2Falcon1plusDovetail_10905:HG2_PB_SVrefine2PB10Xhap12_5749:HG2_PB_SVrefine2PBcRplusDovetail_10130:HG3_10X_allpass_1595:HG3_Ill_GATKHCSBGrefine_5378:HG3_Ill_manta_1855:HG3_PB_SVrefine2Falcon1Dovetail_4781:HG3_PB_assemblyticsfalcon_24308:HG4_PB_SVrefine2Falcon1Dovetail_4846;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0929487;ClusterMaxSizeDiff=0.0929487;ClusterMaxEditDist=0.0929487;PBcalls=12;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=3521;DistForward=22607;DistMin=3521;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:14227989-14228321;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3633.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:0|1:23:1:1:34:./.:0:0:0:0:0/1:27:18:0/1:14:4:.:.:.
chr7	14419437	HG3_Ill_150bpfermikitraw_10278	CCTCCCAAAGTGTTGGGATTACAGGCGTGAGCGAGCGGGCCCGGCCTTAAGCAGTTGCTTTTAATACAATAATTCCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5648:HG4_PB_HySA_11667:HG4_PB_pbsv_7955:HG2_PB_pbsv_7923:HG3_PB_HySA_12031:HG3_PB_pbsv_7707:HG2_PB_HySA_14471:HG4_PB_SVrefine2PBcRDovetail_3905:HG4_PB_SVrefine2Falcon1Dovetail_4850:HG4_Ill_scalpel_7518:HG4_Ill_SVrefine2DISCOVARDovetail_5752:HG4_Ill_GATKHCSBGrefine_5543:HG4_Ill_150bpfermikitraw_10448:HG3_PB_assemblyticsfalcon_24314:HG3_PB_SVrefine2PBcRDovetail_3635:HG3_Ill_scalpel_7771:HG3_Ill_SVrefine2DISCOVARDovetail_5956:HG3_Ill_GATKHCSBGrefine_5379:HG3_Ill_250bpfermikitraw_10568:HG3_Ill_150bpfermikitraw_10278:HG2_PB_SVrefine2PBcRplusDovetail_10132:HG2_PB_SVrefine2PB10Xhap12_5751:HG2_PB_SVrefine2Falcon1plusDovetail_10907:HG2_Ill_scalpel_7655:HG2_Ill_manta_2268:HG2_Ill_SVrefine2DISCOVARplusDovetail_11859:HG2_Ill_GATKHCSBGrefine_5452:HG2_Ill_250bpfermikitraw_10879:HG2_Ill_150bpfermikitraw_10228;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5648:HG4_PB_SVrefine2PBcRDovetail_3905:HG4_PB_SVrefine2Falcon1Dovetail_4850:HG4_Ill_scalpel_7518:HG4_Ill_SVrefine2DISCOVARDovetail_5752:HG4_Ill_GATKHCSBGrefine_5543:HG4_Ill_150bpfermikitraw_10448:HG3_PB_assemblyticsfalcon_24314:HG3_PB_SVrefine2PBcRDovetail_3635:HG3_Ill_scalpel_7771:HG3_Ill_SVrefine2DISCOVARDovetail_5956:HG3_Ill_GATKHCSBGrefine_5379:HG3_Ill_250bpfermikitraw_10568:HG3_Ill_150bpfermikitraw_10278:HG2_PB_SVrefine2PBcRplusDovetail_10132:HG2_PB_SVrefine2PB10Xhap12_5751:HG2_PB_SVrefine2Falcon1plusDovetail_10907:HG2_Ill_scalpel_7655:HG2_Ill_manta_2268:HG2_Ill_SVrefine2DISCOVARplusDovetail_11859:HG2_Ill_GATKHCSBGrefine_5452:HG2_Ill_250bpfermikitraw_10879:HG2_Ill_150bpfermikitraw_10228;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.0397351;PBcalls=13;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-76;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=78;REFWIDENED=7:14419438-14419591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3634.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:54:1/1:1:15:0:24:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr7	14449040	HG4_10X_allpass_1540	GAAAAAGTTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCTGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5649:HG2_10X_allpass_1322:HG4_Ill_Krunchall_11498:HG3_PB_pbsv_7708:HG3_Ill_Krunchall_10875:HG2_Ill_Krunchall_11157:HG2_PB_pbsv_7924:HG2_PB_SVrefine2PB10Xhap12_5753:HG4_Ill_MetaSV_4823:HG3_Ill_MetaSV_4790:HG2_Ill_tnscope_909:HG4_PB_pbsv_7956:HG4_Ill_scalpel_7519:HG4_Ill_manta_1949:HG4_Ill_GATKHCSBGrefine_5544:HG4_10X_allpass_1540:HG3_Ill_scalpel_7772:HG3_Ill_manta_1856:HG3_Ill_GATKHCSBGrefine_5380:HG3_10X_allpass_1596:HG2_PB_assemblyticsfalcon_24461:HG2_PB_SVrefine2Falcon1plusDovetail_10908:HG2_Ill_manta_2269:HG2_Ill_GATKHCSBGrefine_5453:HG4_Ill_SVrefine2DISCOVARDovetail_5753:HG2_PB_SVrefine2PB10Xhap12_5752;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5453:HG2_Ill_manta_2269:HG2_PB_SVrefine2Falcon1plusDovetail_10908:HG2_PB_assemblyticsfalcon_24461:HG3_10X_allpass_1596:HG3_Ill_GATKHCSBGrefine_5380:HG3_Ill_manta_1856:HG3_Ill_scalpel_7772:HG4_10X_allpass_1540:HG4_Ill_GATKHCSBGrefine_5544:HG4_Ill_manta_1949:HG4_Ill_scalpel_7519:HG4_PB_pbsv_7956;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.070122;PBcalls=7;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-299;DistForward=-322;DistMin=-322;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:14449037-14449371;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:40:1:0:30:./.:0:0:0:0:0/1:36:23:0/1:22:9:.:.:.
chr7	14451264	HG3_10X_allpass_1597	ATCTTTCAAGGTGGCTGTAAGATAAACAGTATAATACACACATCTTAACACATTTTCTGACAATGATAACTGTTCTTCAGACAAAAACTTCTATCCTAATAGTTTCTCATCTTTCTCCCCTACCTCTTTCTTTTTTTTCTGGAAATAATTATAGATACAAAGAAAGC	A	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3907:HG4_Ill_Krunchall_11499:HG3_Ill_Krunchall_10876:HG2_Ill_Krunchall_11158:HG3_Ill_MetaSV_4791:HG2_Ill_MetaSV_4616:HG4_PB_pbsv_7957:HG4_Ill_svaba_10211:HG4_Ill_scalpel_7520:HG4_Ill_manta_1950:HG4_Ill_SVrefine2DISCOVARDovetail_5754:HG4_Ill_MetaSV_4824:HG4_Ill_GATKHCSBGrefine_5545:HG3_PB_pbsv_7709:HG3_Ill_svaba_10171:HG3_Ill_manta_1857:HG3_Ill_SVrefine2DISCOVARDovetail_5957:HG3_Ill_GATKHCSBGrefine_5381:HG3_10X_allpass_1597:HG2_PB_pbsv_7925:HG2_PB_assemblyticsfalcon_24462:HG2_PB_SVrefine2Falcon1plusDovetail_10909:HG2_Ill_svaba_10076:HG2_Ill_scalpel_7656:HG2_Ill_SpiralSDKrefine_15574:HG2_Ill_SVrefine2DISCOVARplusDovetail_11860:HG2_Ill_GATKHCSBGrefine_5454:HG2_10X_SVrefine210Xhap12_5650:HG4_Ill_Cortex_3375:HG3_Ill_Cortex_3388:HG2_Ill_Cortex_8195;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5650:HG2_Ill_GATKHCSBGrefine_5454:HG2_Ill_SVrefine2DISCOVARplusDovetail_11860:HG2_Ill_SpiralSDKrefine_15574:HG2_Ill_scalpel_7656:HG2_Ill_svaba_10076:HG2_PB_SVrefine2Falcon1plusDovetail_10909:HG2_PB_assemblyticsfalcon_24462:HG2_PB_pbsv_7925:HG3_10X_allpass_1597:HG3_Ill_GATKHCSBGrefine_5381:HG3_Ill_SVrefine2DISCOVARDovetail_5957:HG3_Ill_manta_1857:HG3_Ill_svaba_10171:HG3_PB_pbsv_7709:HG4_Ill_GATKHCSBGrefine_5545:HG4_Ill_MetaSV_4824:HG4_Ill_SVrefine2DISCOVARDovetail_5754:HG4_Ill_manta_1950:HG4_Ill_scalpel_7520:HG4_Ill_svaba_10211:HG4_PB_pbsv_7957;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0497238;ClusterMaxSizeDiff=0.0497238;ClusterMaxEditDist=0.1;PBcalls=6;Illcalls=23;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-166;DistBack=-167;DistForward=-163;DistMin=-167;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=7:14451265-14451433;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:30:0|1:45:1:2:28:./.:0:0:0:0:0/1:47:43:./.:.:.:.:.:.
chr7	14680853	HG3_Ill_GATKHC_12961	TTTTACAATATAGGGATTTGGTTTACAATATAGGGATTTGGTTTACAATATAGGGATTTGGTTTACAATATAGGGATTTGG	T	20	PASS	ClusterIDs=HG2_PB_HySA_14481:HG3_Ill_Krunchall_10879:HG2_Ill_Krunchall_11161:HG4_Ill_Spiral_651:HG3_Ill_Spiral_8513:HG2_Ill_Spiral_568:HG2_PB_pbsv_7927:HG3_PB_pbsv_7711:HG4_PB_pbsv_7960:HG4_PB_SVrefine2PBcRDovetail_3910:HG4_PB_SVrefine2Falcon1Dovetail_4853:HG4_Ill_svaba_10213:HG4_Ill_manta_1951:HG4_Ill_SVrefine2DISCOVARDovetail_5755:HG4_Ill_Krunchall_11502:HG4_Ill_GATKHC_13079:HG4_Ill_GATKHCSBGrefine_5546:HG4_Ill_250bpfermikitraw_10891:HG4_Ill_150bpfermikitraw_10452:HG4_10X_allpass_1541:HG3_PB_SVrefine2PBcRDovetail_3637:HG3_PB_SVrefine2Falcon1Dovetail_4787:HG3_PB_HySA_12034:HG3_Ill_svaba_10172:HG3_Ill_manta_1858:HG3_Ill_SVrefine2DISCOVARDovetail_5958:HG3_Ill_Krunchall_10878:HG3_Ill_GATKHC_12961:HG3_Ill_GATKHCSBGrefine_5382:HG3_Ill_250bpfermikitraw_10571:HG3_Ill_150bpfermikitraw_10280:HG3_10X_allpass_1598:HG2_PB_SVrefine2PBcRplusDovetail_10135:HG2_PB_SVrefine2PB10Xhap12_5756:HG2_PB_SVrefine2Falcon2Bionano_3896:HG2_PB_SVrefine2Falcon1plusDovetail_10912:HG2_Ill_svaba_10078:HG2_Ill_manta_2270:HG2_Ill_SpiralSDKrefine_15576:HG2_Ill_SVrefine2DISCOVARplusDovetail_11861:HG2_Ill_Krunchall_11160:HG2_Ill_GATKHC_12994:HG2_Ill_GATKHCSBGrefine_5455:HG2_Ill_250bpfermikitraw_10883:HG2_Ill_150bpfermikitraw_10232:HG2_10X_allpass_1323:HG2_10X_SVrefine210Xhap12_5652:HG4_PB_HySA_11674;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5652:HG2_10X_allpass_1323:HG2_Ill_150bpfermikitraw_10232:HG2_Ill_250bpfermikitraw_10883:HG2_Ill_GATKHCSBGrefine_5455:HG2_Ill_GATKHC_12994:HG2_Ill_Krunchall_11160:HG2_Ill_SVrefine2DISCOVARplusDovetail_11861:HG2_Ill_SpiralSDKrefine_15576:HG2_Ill_manta_2270:HG2_Ill_svaba_10078:HG2_PB_SVrefine2Falcon1plusDovetail_10912:HG2_PB_SVrefine2Falcon2Bionano_3896:HG2_PB_SVrefine2PB10Xhap12_5756:HG2_PB_SVrefine2PBcRplusDovetail_10135:HG3_10X_allpass_1598:HG3_Ill_150bpfermikitraw_10280:HG3_Ill_250bpfermikitraw_10571:HG3_Ill_GATKHCSBGrefine_5382:HG3_Ill_GATKHC_12961:HG3_Ill_Krunchall_10878:HG3_Ill_SVrefine2DISCOVARDovetail_5958:HG3_Ill_manta_1858:HG3_Ill_svaba_10172:HG3_PB_HySA_12034:HG3_PB_SVrefine2Falcon1Dovetail_4787:HG3_PB_SVrefine2PBcRDovetail_3637:HG4_10X_allpass_1541:HG4_Ill_150bpfermikitraw_10452:HG4_Ill_250bpfermikitraw_10891:HG4_Ill_GATKHCSBGrefine_5546:HG4_Ill_GATKHC_13079:HG4_Ill_Krunchall_11502:HG4_Ill_SVrefine2DISCOVARDovetail_5755:HG4_Ill_manta_1951:HG4_Ill_svaba_10213:HG4_PB_SVrefine2Falcon1Dovetail_4853:HG4_PB_SVrefine2PBcRDovetail_3910;NumExactMatchSVs=38;ClusterMaxShiftDist=0.0246914;ClusterMaxSizeDiff=0.0246914;ClusterMaxEditDist=0.025;PBcalls=14;Illcalls=30;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=25;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=15;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-80;DistBack=47370;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=7:14680854-14680970;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3637.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:2:22:2:20:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr7	14910419	HG4_10X_allpass_1542	TAAAAAAAAGAAAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGAGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_569:HG3_10X_allpass_1599:HG2_PB_assemblyticsPBcR_23689:HG4_PB_assemblyticsfalcon_23909:HG2_PB_assemblyticsfalcon_24473:HG3_Ill_Krunchall_10884:HG2_Ill_Krunchall_11169:HG4_Ill_Spiral_652:HG3_PB_assemblyticsfalcon_24326:HG2_PB_pbsv_7928:HG4_PB_HySA_11678:HG3_PB_HySA_12039:HG4_PB_pbsv_7961:HG4_Ill_MetaSV_4825:HG3_Ill_MetaSV_4792:HG2_PB_HySA_14488:HG2_Ill_tnscope_910:HG2_Ill_MetaSV_4617:HG4_PB_SVrefine2PBcRDovetail_3911:HG4_PB_SVrefine2Falcon1Dovetail_4854:HG4_Ill_scalpel_7525:HG4_Ill_manta_1952:HG4_Ill_SVrefine2DISCOVARDovetail_5756:HG4_Ill_GATKHCSBGrefine_5547:HG4_10X_allpass_1542:HG3_PB_pbsv_7712:HG3_PB_SVrefine2PBcRDovetail_3638:HG3_PB_SVrefine2Falcon1Dovetail_4788:HG3_Ill_manta_1859:HG3_Ill_SVrefine2DISCOVARDovetail_5960:HG3_Ill_GATKHCSBGrefine_5383:HG2_PB_SVrefine2PBcRplusDovetail_10136:HG2_PB_SVrefine2PB10Xhap12_5757:HG2_PB_SVrefine2Falcon2Bionano_3897:HG2_PB_SVrefine2Falcon1plusDovetail_10913:HG2_Ill_manta_2271:HG2_Ill_SVrefine2DISCOVARplusDovetail_11862:HG2_Ill_GATKHCSBGrefine_5456:HG2_10X_allpass_1324:HG2_10X_SVrefine210Xhap12_5653:HG2_Ill_breakscan11_1151:HG3_Ill_Spiral_8518;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5653:HG2_10X_allpass_1324:HG2_Ill_GATKHCSBGrefine_5456:HG2_Ill_SVrefine2DISCOVARplusDovetail_11862:HG2_Ill_manta_2271:HG2_PB_SVrefine2Falcon1plusDovetail_10913:HG2_PB_SVrefine2Falcon2Bionano_3897:HG2_PB_SVrefine2PB10Xhap12_5757:HG2_PB_SVrefine2PBcRplusDovetail_10136:HG3_Ill_GATKHCSBGrefine_5383:HG3_Ill_SVrefine2DISCOVARDovetail_5960:HG3_Ill_manta_1859:HG3_PB_SVrefine2Falcon1Dovetail_4788:HG3_PB_SVrefine2PBcRDovetail_3638:HG3_PB_pbsv_7712:HG4_10X_allpass_1542:HG4_Ill_GATKHCSBGrefine_5547:HG4_Ill_SVrefine2DISCOVARDovetail_5756:HG4_Ill_manta_1952:HG4_Ill_scalpel_7525:HG4_PB_SVrefine2Falcon1Dovetail_4854:HG4_PB_SVrefine2PBcRDovetail_3911;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0990415;ClusterMaxSizeDiff=0.0990415;ClusterMaxEditDist=0.0990415;PBcalls=18;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=13531;DistForward=-24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:14910420-14910752;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3638.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:./.:0:4:0:12:./.:0:0:0:0:1/1:0:40:./.:1:19:.:.:.
chr7	15229698	HG2_Ill_MetaSV_4618	CCATATATATATATATATATATTTATATATATATATATATATATATATATATATTTATATATATATATATATATATATATATATATTTATATATATATATATATATATATTTATATATATATATATATTTATATATATATATATATATATATATATATT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_23691:HG4_Ill_Krunchall_11511:HG3_Ill_Krunchall_10887:HG2_Ill_Krunchall_11172:HG4_Ill_Krunchall_11510:HG4_PB_pbsv_7962:HG3_PB_pbsv_7715:HG2_PB_pbsv_7930:HG4_PB_assemblyticsfalcon_23911:HG4_PB_SVrefine2Falcon1Dovetail_4855:HG4_Ill_SVrefine2DISCOVARDovetail_5758:HG4_Ill_GATKHC_13087:HG4_Ill_GATKHCSBGrefine_5549:HG4_10X_allpass_1543:HG4_PB_HySA_11681:HG3_PB_HySA_12044:HG3_Ill_MetaSV_4794:HG2_PB_HySA_14491:HG4_PB_SVrefine2PBcRDovetail_3913:HG3_PB_assemblyticsfalcon_24329:HG3_PB_SVrefine2PBcRDovetail_3639:HG3_PB_SVrefine2Falcon1Dovetail_4790:HG3_Ill_SVrefine2DISCOVARDovetail_5962:HG3_Ill_GATKHCSBGrefine_5385:HG3_10X_allpass_1600:HG2_PB_assemblyticsfalcon_24475:HG2_PB_SVrefine2PBcRplusDovetail_10137:HG2_PB_SVrefine2PB10Xhap12_5758:HG2_PB_SVrefine2Falcon2Bionano_3898:HG2_PB_SVrefine2Falcon1plusDovetail_10914:HG2_Ill_manta_2272:HG2_Ill_SpiralSDKrefine_15585:HG2_Ill_SVrefine2DISCOVARplusDovetail_11864:HG2_Ill_MetaSV_4618:HG2_Ill_GATKHC_13006:HG2_Ill_GATKHCSBGrefine_5458:HG2_Ill_250bpfermikitraw_10894:HG2_Ill_150bpfermikitraw_10242:HG2_10X_SVrefine210Xhap12_5655;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5655:HG2_Ill_150bpfermikitraw_10242:HG2_Ill_250bpfermikitraw_10894:HG2_Ill_GATKHCSBGrefine_5458:HG2_Ill_GATKHC_13006:HG2_Ill_MetaSV_4618:HG2_Ill_SVrefine2DISCOVARplusDovetail_11864:HG2_Ill_SpiralSDKrefine_15585:HG2_Ill_manta_2272:HG2_PB_SVrefine2Falcon1plusDovetail_10914:HG2_PB_SVrefine2Falcon2Bionano_3898:HG2_PB_SVrefine2PB10Xhap12_5758:HG2_PB_SVrefine2PBcRplusDovetail_10137:HG2_PB_assemblyticsfalcon_24475:HG3_10X_allpass_1600:HG3_Ill_GATKHCSBGrefine_5385:HG3_Ill_SVrefine2DISCOVARDovetail_5962:HG3_PB_SVrefine2Falcon1Dovetail_4790:HG3_PB_SVrefine2PBcRDovetail_3639:HG3_PB_assemblyticsfalcon_24329:HG4_PB_SVrefine2PBcRDovetail_3913;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0188088;ClusterMaxSizeDiff=0.0188088;ClusterMaxEditDist=0.0251572;PBcalls=18;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-158;DistBack=-339;DistForward=8010;DistMin=-339;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:15229699-15229856;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:0:30:1:33:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr7	15885449	HG4_PB_SVrefine2Falcon1Dovetail_4860	AAATAAAATATTTCCCTGCATTAAAAAGAATTTCTGTGCTCTAACTCCATTTCTTATCCTCTTTGCTTCTGGAAACATAAACAAACAAACAAACAAACAAACAAAAACTACCAGGCTGTGGAATGGAATAAATCCCTTACTTTTGCATTCTTCCTCACTTGCCTGTTAAACTCAATCATGTCCTTTAGAAACAGCAGTGAGTGTCATGAAAGTCCCCTGGCCCCGAAACTGTAAATAACGCTAAAGCATGTGCTATGTCATCACACAGGAATCACTGTAAGGAATAACAGGAAGGGACTTCAAAGATTATCTGGTTTAATTCACCCACTTTATAGATGAGGAAACCAGGGTCTAGAGAGGGAAGTCCCCTGAACAAGGTCACATGTATAATTAGTGGGAGACCATGTTTGTTTATAAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_7722:HG2_PB_HySA_14510:HG3_Ill_Krunchall_10896:HG2_Ill_Krunchall_11180:HG2_PB_assemblyticsPBcR_23708:HG2_PB_pbsv_7937:HG4_PB_assemblyticsfalcon_23929:HG4_PB_SVrefine2Falcon1Dovetail_4860:HG3_PB_assemblyticsfalcon_24347:HG3_PB_SVrefine2PBcRDovetail_3643:HG3_PB_SVrefine2Falcon1Dovetail_4795:HG3_Ill_scalpel_7788:HG3_Ill_manta_1861:HG3_Ill_SVrefine2DISCOVARDovetail_5970:HG3_Ill_MetaSV_4795:HG3_Ill_GATKHCSBGrefine_5394:HG3_10X_allpass_1601:HG2_PB_assemblyticsfalcon_24491:HG2_PB_SVrefine2PBcRplusDovetail_10142:HG2_PB_SVrefine2PB10Xhap12_5764:HG2_PB_SVrefine2Falcon2Bionano_3903:HG2_PB_SVrefine2Falcon1plusDovetail_10919:HG2_Ill_manta_2274:HG2_Ill_breakscan11_1152:HG2_Ill_SpiralSDKrefine_15591:HG2_Ill_SVrefine2DISCOVARplusDovetail_11871:HG2_Ill_GATKHCSBGrefine_5467:HG2_10X_allpass_1326:HG2_10X_SVrefine210Xhap12_5659:HG3_PB_HySA_12062:HG2_Ill_tnscope_911:HG2_Ill_MetaSV_4621;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5659:HG2_10X_allpass_1326:HG2_Ill_GATKHCSBGrefine_5467:HG2_Ill_SVrefine2DISCOVARplusDovetail_11871:HG2_Ill_SpiralSDKrefine_15591:HG2_Ill_breakscan11_1152:HG2_Ill_manta_2274:HG2_PB_SVrefine2Falcon1plusDovetail_10919:HG2_PB_SVrefine2Falcon2Bionano_3903:HG2_PB_SVrefine2PB10Xhap12_5764:HG2_PB_SVrefine2PBcRplusDovetail_10142:HG2_PB_assemblyticsfalcon_24491:HG3_10X_allpass_1601:HG3_Ill_GATKHCSBGrefine_5394:HG3_Ill_MetaSV_4795:HG3_Ill_SVrefine2DISCOVARDovetail_5970:HG3_Ill_manta_1861:HG3_Ill_scalpel_7788:HG3_PB_SVrefine2Falcon1Dovetail_4795:HG3_PB_SVrefine2PBcRDovetail_3643:HG3_PB_assemblyticsfalcon_24347:HG4_PB_SVrefine2Falcon1Dovetail_4860:HG4_PB_assemblyticsfalcon_23929;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0168269;ClusterMaxSizeDiff=0.0168269;ClusterMaxEditDist=0.0168269;PBcalls=15;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-417;DistBack=31975;DistForward=1786;DistMin=1786;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=7:15885450-15885870;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3640.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:42:1|0:8:38:14:0:./.:0:0:0:0:0/1:38:24:0/1:41:13:.:.:.
chr7	16171773	HG2_Ill_breakscan11_1153	CAAAGAGTGATCTTGAGCCTTATGAACTAATGGCATTTGCCTTAGGTTTTGAACTTACATAGGACTGGTTACTCCTTTCTTCTTTTCTATTATCCGCTTTCAGAGTGGTGATGTCCATCGTATGCCTGTAACATTATTGTATTTTGGAAACATATAACATGTTTGTTTCACAGGTTCCCAGCTAGAGAACAATTTGCCTCAGGAGACCTTGACTACAGTGATGAAGACAGGATCTAAACAAATGAGTCTTAGATACATAATGAAGAAAGCATATATAGAATTCTCTCGTTGAAAGAGAATAGAAAGGATTAAGAATGACTCAGGACTTTGTAAAGGGAAAATAGTACTCAAAAAAGTAAAATTAGAGAAGTATATGTTTTAATGAGGTTAGAAAGAGGTAGAAAGTGGAAAAAGAGATTGAGTAAATGATTTCTTCATATGAAACTAAAGTCTATAGTAGGTTTTATAATACCATTGACTCTTGAACCACATAAGCTTGAACTGCATGGGTTTACTTACATGCAAATTTTTAAAAAGGAAATTTACTGAAAATTTTTTTGGAGATTTGCAACAACTTGTAAAAATTGGCAAACATTGTAGCCTAGAAATACCAAAAAAATAAAAAGTTAGGTATGTCATGAATGCACAAAATATATGTAGATGCTAGTCTCTTTCATCATTTACTATAATAAAATATGCCCAAATCTATTGTAAAAAGTTAATATTTGGCTGGGCATGGTGGTTCATGCCTGAAGTCCCAGCACTCTGAGACGCTGAGGTGGGAGGACTGCCTGAGCTCAGGAGTTTGAGACTAGTCTGGGAAACATAGTGAGACCATGTCTCTACAAAAAATACAAAAATTAGTCAGGCATAGTGGCCTGTGTCTGTAGTTCCAGCTACTTGGGATACTGAGGTGGGGGGATCACTTGAGCTTGGGATGTCAAAGCACTTGAGGTCAGGAGTTCAAGACTAGCCTGGACAACATGGTGAAATCCCATCTCTACTAAAAATAAAAAAAAGTTAGTTGGGTATGGTGGTGCATTACTGTAGTCCCAGCTACTTGGGAAACTGATGCATGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAAATCACACCACTGCACTCAACCCTGGGTGACAGAGTGAGCATCTGTCTCAAAAAAAAAAAAGGTAAAATTTATCAAAACTCAATGCACACAACCACTTACAGACAATACACAGCACCACTTGCAGTCAAGAGAAATGTAAACAAATTTATAGTATTAAGCTACAACTGCATAAAATTAAGTGTAATACATAGTATACTACTGTAATAATTTCATAGCCACCTCCTGTTGCTATTTCAGTGGGCTCGAATGTTGCAAGTATCTGCTTAAAATGCTGTGTGATGCTAATCATCTCCACATGAGCAGTTCATCTCTCTAGTAAAATGTGTTATGATAGTAAAAAGTGATCTCCCATGGTTCTTAGGTATTTTTCATCATGTTTAGTCTAATACTGTAAACCTTGCATAACACCATGGGAGCCATACAAAGTACCACTGATGATGCTGGAAGTGCTCTCAAAAAGTTAAGAAAAGTCATGGCATTACCAAACAAAAAAGCTGAAATGCTTGATATGTACCACAGATTTAGGTCTGCAGCTGAGGATGCCTTCCATTTCAGAGGATTCATCTTGTAAAGAAAGAGATGAGGTAAACTTACCATATCAACAAATACAGTATTGTAAATGTCCTTATGATTTTCTTAACATCTTCTTAACATCATCCTTATGATTTTCTTTTTTTTTCCGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGTAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGCAGAGACGGGGTTTCACCATGTTAGTCAGGATGGTCTCAATCCCCTGACCTCGTGATCCGCCCGCCTCGGCCCCCTAAAGTGCTGGGATTACAGGCGTGAGACGCCACACACGGACCTTATGATTTTCTTCACATCTTTTCCCTAGCTTACTTTATTGTAAGAATGCAGTATATAATACATACAGCATACAGCAGGGGTCTGCAACCCCCAGGCTACAGACCACTACCAGCCCATAGCCTGTTAGAACCTAATGATAAATGTAATACACTTGAATCATCCTGAAACCATCCTCCCACCGACCTCTGTCCATGGAAAAATTGTCTTCCATGAAA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_7939:HG4_PB_SVrefine2PBcRDovetail_3920:HG4_Ill_SVrefine2DISCOVARDovetail_5765:HG4_10X_allpass_1545:HG2_PB_assemblyticsfalcon_24494:HG2_PB_SVrefine2PBcRplusDovetail_10143:HG2_PB_SVrefine2PB10Xhap12_5765:HG2_PB_SVrefine2Falcon1plusDovetail_10920:HG2_Ill_breakscan11_1153:HG2_Ill_SpiralSDKrefine_15594:HG2_10X_SVrefine210Xhap12_5660:HG2_10X_allpass_1327:HG4_Ill_MetaSV_4828:HG2_Ill_tnscope_912:HG2_Ill_MetaSV_4622:HG2_PB_assemblyticsPBcR_23711:HG2_Ill_Krunchall_11184:HG4_PB_pbsv_7971;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5660:HG2_Ill_SpiralSDKrefine_15594:HG2_Ill_breakscan11_1153:HG2_PB_SVrefine2Falcon1plusDovetail_10920:HG2_PB_SVrefine2PB10Xhap12_5765:HG2_PB_SVrefine2PBcRplusDovetail_10143:HG2_PB_assemblyticsfalcon_24494:HG4_10X_allpass_1545:HG4_Ill_SVrefine2DISCOVARDovetail_5765:HG4_PB_SVrefine2PBcRDovetail_3920;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00173989;ClusterMaxSizeDiff=0.00173989;ClusterMaxEditDist=0.0026104;PBcalls=8;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-2299;DistBack=-1;DistForward=-2299;DistMin=-2299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:16171774-16174072;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:58:1|0:4:20:29:3:./.:0:0:0:0:0/1:65:15:0/1:218:81:2619:.:.
chr7	16936287	HG4_Ill_svaba_10235	TAGAAGTGATGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_7727:HG2_PB_HySA_14516:HG4_Ill_Krunchall_11528:HG2_Ill_Krunchall_11189:HG2_PB_assemblyticsPBcR_23717:HG4_PB_assemblyticsfalcon_23936:HG3_PB_assemblyticsfalcon_24352:HG2_PB_assemblyticsfalcon_24500:HG2_PB_pbsv_7943:HG2_Ill_breakscan11_1154:HG4_Ill_MetaSV_4829:HG3_Ill_MetaSV_4797:HG2_Ill_tnscope_913:HG2_Ill_MetaSV_4624:HG4_PB_pbsv_7974:HG4_PB_SVrefine2PBcRDovetail_3923:HG4_PB_SVrefine2Falcon1Dovetail_4864:HG4_Ill_svaba_10235:HG4_Ill_scalpel_7546:HG4_Ill_manta_1955:HG4_Ill_SVrefine2DISCOVARDovetail_5768:HG4_Ill_GATKHCSBGrefine_5557:HG4_10X_allpass_1546:HG3_PB_SVrefine2PBcRDovetail_3647:HG3_PB_SVrefine2Falcon1Dovetail_4799:HG3_PB_HySA_12067:HG3_Ill_svaba_10195:HG3_Ill_scalpel_7794:HG3_Ill_manta_1863:HG3_Ill_SVrefine2DISCOVARDovetail_5974:HG3_Ill_GATKHCSBGrefine_5398:HG3_10X_allpass_1602:HG2_PB_SVrefine2PBcRplusDovetail_10145:HG2_PB_SVrefine2PB10Xhap12_5768:HG2_PB_SVrefine2Falcon2Bionano_3906:HG2_PB_SVrefine2Falcon1plusDovetail_10923:HG2_Ill_svaba_10101:HG2_Ill_scalpel_7681:HG2_Ill_manta_2276:HG2_Ill_SVrefine2DISCOVARplusDovetail_11878:HG2_Ill_GATKHCSBGrefine_5470:HG2_10X_allpass_1328:HG2_10X_SVrefine210Xhap12_5664;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5664:HG2_10X_allpass_1328:HG2_Ill_GATKHCSBGrefine_5470:HG2_Ill_SVrefine2DISCOVARplusDovetail_11878:HG2_Ill_manta_2276:HG2_Ill_scalpel_7681:HG2_Ill_svaba_10101:HG2_PB_SVrefine2Falcon1plusDovetail_10923:HG2_PB_SVrefine2Falcon2Bionano_3906:HG2_PB_SVrefine2PB10Xhap12_5768:HG2_PB_SVrefine2PBcRplusDovetail_10145:HG3_10X_allpass_1602:HG3_Ill_GATKHCSBGrefine_5398:HG3_Ill_SVrefine2DISCOVARDovetail_5974:HG3_Ill_manta_1863:HG3_Ill_scalpel_7794:HG3_Ill_svaba_10195:HG3_PB_HySA_12067:HG3_PB_SVrefine2Falcon1Dovetail_4799:HG3_PB_SVrefine2PBcRDovetail_3647:HG4_10X_allpass_1546:HG4_Ill_GATKHCSBGrefine_5557:HG4_Ill_SVrefine2DISCOVARDovetail_5768:HG4_Ill_manta_1955:HG4_Ill_scalpel_7546:HG4_Ill_svaba_10235:HG4_PB_SVrefine2Falcon1Dovetail_4864:HG4_PB_SVrefine2PBcRDovetail_3923:HG4_PB_pbsv_7974;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0809595;ClusterMaxSizeDiff=0.0809595;ClusterMaxEditDist=0.0809595;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=13345;DistForward=-326;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:16936288-16936640;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3642.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:2:29:0:23:./.:0:0:0:0:1/1:0:35:0/1:2:12:.:.:.
chr7	18144706	HG4_PB_SVrefine2PBcRDovetail_3927	CTGCTTTCTAGATGAGATTTCATCTACATCTAGATGCTTTCTAGATGGGGATTTCATCTACATCTAGGATGCTTTCTAGATGTGGATTTCATCTACATCTAGGATGCTTTCTAGATGTGGATTTCATCTACATCTAGGA	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10927:HG3_PB_pbsv_7730:HG4_PB_pbsv_7976:HG2_PB_pbsv_7947:HG4_PB_SVrefine2PBcRDovetail_3927:HG3_PB_SVrefine2PBcRDovetail_3650:HG3_PB_SVrefine2Falcon1Dovetail_4803:HG2_PB_SVrefine2PB10Xhap12_5773:HG2_PB_SVrefine2Falcon2Bionano_3910;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10927:HG4_PB_SVrefine2PBcRDovetail_3927:HG3_PB_SVrefine2PBcRDovetail_3650:HG3_PB_SVrefine2Falcon1Dovetail_4803:HG2_PB_SVrefine2PB10Xhap12_5773:HG2_PB_SVrefine2Falcon2Bionano_3910;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0291971;ClusterMaxSizeDiff=0.0291971;ClusterMaxEditDist=0.0588235;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-138;DistBack=-104;DistForward=-139;DistMin=-139;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=406;REFWIDENED=7:18144707-18145250;PctSeqSimilarity=0.7519;PctSizeSimilarity=0.7609;PctRecOverlap=0.7626;SizeDiff=33;StartDistance=-31;EndDistance=2;GTMatch=0;TruScore=75;MatchId=3643.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:14:67:1/1:3:25:3:21:./.:0:0:0:0:0/0:27:0:./.:.:.:.:.:.
chr7	19347577	HG2_Ill_150bpfermikitraw_10282	GAATAGAGATTTAAGATTTAATAGAGATTTAATAATTTAAATAGAGATTTAAATTATTCACTTCTTA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10282:HG3_PB_pbsv_7732:HG2_PB_pbsv_7950:HG3_PB_HySA_12077:HG4_PB_SVrefine2Falcon1Dovetail_4870:HG3_PB_SVrefine2Falcon1Dovetail_4807:HG3_Ill_svaba_10214:HG3_Ill_scalpel_7806:HG3_Ill_SVrefine2DISCOVARDovetail_5989:HG3_Ill_Krunchall_10921:HG3_Ill_GATKHCSBGrefine_5402:HG3_Ill_250bpfermikitraw_10615:HG3_Ill_150bpfermikitraw_10329:HG3_10X_allpass_1604:HG2_PB_assemblyticsfalcon_24514:HG2_PB_SVrefine2Falcon2Bionano_3913:HG2_PB_HySA_14534:HG2_Ill_svaba_10120:HG2_Ill_manta_2278:HG2_Ill_SpiralSDKrefine_15606:HG2_Ill_GATKHCSBGrefine_5474:HG2_Ill_250bpfermikitraw_10933;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10282:HG4_PB_SVrefine2Falcon1Dovetail_4870:HG3_PB_SVrefine2Falcon1Dovetail_4807:HG3_Ill_svaba_10214:HG3_Ill_scalpel_7806:HG3_Ill_SVrefine2DISCOVARDovetail_5989:HG3_Ill_Krunchall_10921:HG3_Ill_GATKHCSBGrefine_5402:HG3_Ill_250bpfermikitraw_10615:HG3_Ill_150bpfermikitraw_10329:HG3_10X_allpass_1604:HG2_PB_assemblyticsfalcon_24514:HG2_PB_SVrefine2Falcon2Bionano_3913:HG2_PB_HySA_14534:HG2_Ill_svaba_10120:HG2_Ill_manta_2278:HG2_Ill_SpiralSDKrefine_15606:HG2_Ill_GATKHCSBGrefine_5474:HG2_Ill_250bpfermikitraw_10933;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.030303;PBcalls=8;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-66;DistBack=48316;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=64;REFWIDENED=7:19347578-19347707;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3644.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:./.:11:27:11:4:./.:0:0:0:0:0/1:33:15:./.:.:.:.:.:.
chr7	21249870	HG3_Ill_svaba_10234	GAGATAAGAGGAGTTTGAAGAGAAAACTGTGAGCTGTGTTTTAGACACGATGTGCTTGAGATGCTTGTGAGGCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5675:HG2_PB_HySA_14556:HG3_PB_HySA_12092:HG3_PB_pbsv_7741:HG4_PB_pbsv_7987:HG2_PB_pbsv_7958:HG4_PB_HySA_11729:HG4_PB_assemblyticsfalcon_23971:HG4_Ill_svaba_10273:HG4_Ill_scalpel_7566:HG4_Ill_Krunchall_11559:HG4_Ill_GATKHCSBGrefine_5569:HG4_Ill_250bpfermikitraw_10947:HG4_Ill_150bpfermikitraw_10509:HG3_PB_assemblyticsfalcon_24384:HG3_Ill_svaba_10234:HG3_Ill_scalpel_7815:HG3_Ill_Krunchall_10937:HG3_Ill_GATKHCSBGrefine_5408:HG3_Ill_250bpfermikitraw_10628:HG3_Ill_150bpfermikitraw_10344:HG2_Ill_svaba_10140:HG2_Ill_scalpel_7703:HG2_Ill_manta_2281:HG2_Ill_SpiralSDKrefine_15617:HG2_Ill_GATKHCSBGrefine_5482:HG2_Ill_250bpfermikitraw_10950:HG2_Ill_150bpfermikitraw_10298:HG4_PB_SVrefine2PBcRDovetail_3932:HG4_Ill_SVrefine2DISCOVARDovetail_5787:HG3_Ill_SVrefine2DISCOVARDovetail_6002:HG2_PB_SVrefine2PB10Xhap12_5779:HG2_PB_SVrefine2Falcon2Bionano_3917:HG2_PB_SVrefine2Falcon1plusDovetail_10933:HG2_Ill_SVrefine2DISCOVARplusDovetail_11900;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10298:HG2_Ill_250bpfermikitraw_10950:HG2_Ill_GATKHCSBGrefine_5482:HG2_Ill_SpiralSDKrefine_15617:HG2_Ill_manta_2281:HG2_Ill_scalpel_7703:HG2_Ill_svaba_10140:HG3_Ill_150bpfermikitraw_10344:HG3_Ill_250bpfermikitraw_10628:HG3_Ill_GATKHCSBGrefine_5408:HG3_Ill_Krunchall_10937:HG3_Ill_scalpel_7815:HG3_Ill_svaba_10234:HG3_PB_assemblyticsfalcon_24384:HG4_Ill_150bpfermikitraw_10509:HG4_Ill_250bpfermikitraw_10947:HG4_Ill_GATKHCSBGrefine_5569:HG4_Ill_Krunchall_11559:HG4_Ill_scalpel_7566:HG4_Ill_svaba_10273:HG4_PB_assemblyticsfalcon_23971;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0408163;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.0547945;PBcalls=12;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-73;DistBack=7;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=80;REFWIDENED=7:21249864-21250016;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3645.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:./.:0:0:0:1:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr7	21587706	HG2_Ill_SpiralSDKrefine_15621	ACCCAACCCATTAATGGGTTATTAATTTCAGCATTTTTTGCTAGTTTGTTGGCTAGGGTTGTTCTTGTAAAGCTTTTGTGATGGTGCCATCTGGGGCGGTATTCTTGGGAATGACAACACTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5676:HG3_PB_pbsv_7743:HG4_PB_pbsv_7988:HG4_PB_assemblyticsfalcon_23975:HG4_Ill_Krunchall_11564:HG3_PB_assemblyticsfalcon_24386:HG3_Ill_Krunchall_10942:HG2_PB_assemblyticsfalcon_24534:HG4_PB_SVrefine2PBcRDovetail_3933:HG4_PB_SVrefine2Falcon1Dovetail_4875:HG4_Ill_svaba_10277:HG4_Ill_manta_1958:HG4_Ill_GATKHCSBGrefine_5570:HG4_10X_allpass_1547:HG3_PB_SVrefine2Falcon1Dovetail_4811:HG3_Ill_svaba_10238:HG3_Ill_SVrefine2DISCOVARDovetail_6003:HG3_Ill_MetaSV_4798:HG3_Ill_GATKHCSBGrefine_5409:HG3_10X_allpass_1605:HG2_PB_pbsv_7960:HG2_PB_SVrefine2Falcon1plusDovetail_10934:HG2_Ill_svaba_10144:HG2_Ill_manta_2282:HG2_Ill_SpiralSDKrefine_15621:HG2_Ill_SVrefine2DISCOVARplusDovetail_11902:HG2_Ill_MetaSV_4626:HG2_Ill_GATKHCSBGrefine_5483:HG2_10X_allpass_1331;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5676:HG4_PB_SVrefine2PBcRDovetail_3933:HG4_PB_SVrefine2Falcon1Dovetail_4875:HG4_Ill_svaba_10277:HG4_Ill_manta_1958:HG4_Ill_GATKHCSBGrefine_5570:HG4_10X_allpass_1547:HG3_PB_SVrefine2Falcon1Dovetail_4811:HG3_Ill_svaba_10238:HG3_Ill_SVrefine2DISCOVARDovetail_6003:HG3_Ill_MetaSV_4798:HG3_Ill_GATKHCSBGrefine_5409:HG3_10X_allpass_1605:HG2_PB_pbsv_7960:HG2_PB_SVrefine2Falcon1plusDovetail_10934:HG2_Ill_svaba_10144:HG2_Ill_manta_2282:HG2_Ill_SpiralSDKrefine_15621:HG2_Ill_SVrefine2DISCOVARplusDovetail_11902:HG2_Ill_MetaSV_4626:HG2_Ill_GATKHCSBGrefine_5483:HG2_10X_allpass_1331;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0165289;ClusterMaxSizeDiff=0.0165289;ClusterMaxEditDist=0.0165289;PBcalls=10;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-121;DistBack=50782;DistForward=49982;DistMin=49982;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=7:21587707-21587835;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3646.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:0|1:35:0:0:27:./.:0:0:0:0:0/1:25:17:./.:.:.:.:.:.
chr7	22068754	HG2_10X_allpass_1332	CCTAGCTAAGGGATTGTAAATACACCAATCGGCACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAGGGTTTGTGAATGCACCAATCCACACTCTGTATCTAGCTACTCTGGTGGGGACTTGGGTTATGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5678:HG2_PB_assemblyticsPBcR_23756:HG2_PB_pbsv_7962:HG4_PB_assemblyticsfalcon_23978:HG3_PB_assemblyticsfalcon_24388:HG4_PB_pbsv_7991:HG3_PB_pbsv_7746:HG4_PB_SVrefine2Falcon1Dovetail_4877:HG4_Ill_GATKHCSBGrefine_5571:HG4_10X_allpass_1548:HG3_PB_SVrefine2Falcon1Dovetail_4812:HG3_Ill_GATKHCSBGrefine_5412:HG3_10X_allpass_1606:HG2_Ill_GATKHCSBGrefine_5484:HG2_10X_allpass_1332:HG2_10X_SVrefine210Xhap12_5679:HG4_PB_SVrefine2PBcRDovetail_3934:HG4_Ill_SVrefine2DISCOVARDovetail_5791:HG2_PB_SVrefine2PB10Xhap12_5780:HG2_Ill_SVrefine2DISCOVARplusDovetail_11907;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5679:HG2_10X_allpass_1332:HG2_Ill_GATKHCSBGrefine_5484:HG3_10X_allpass_1606:HG3_Ill_GATKHCSBGrefine_5412:HG3_PB_SVrefine2Falcon1Dovetail_4812:HG4_10X_allpass_1548:HG4_Ill_GATKHCSBGrefine_5571:HG4_PB_SVrefine2Falcon1Dovetail_4877;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0509554;ClusterMaxSizeDiff=0.0509554;ClusterMaxEditDist=0.0636943;PBcalls=10;Illcalls=5;TenXcalls=5;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=4;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-154;DistBack=-3413;DistForward=-143;DistMin=-3413;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=176;REFWIDENED=7:22068726-22069055;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:48:0|1:35:1:1:40:./.:0:0:0:0:0/1:27:15:./.:.:.:.:.:.
chr7	22202731	HG2_Ill_GATKHC_13072	TTTTCATTTTAAAATAAAATGAAAATTATTTCATTTTAAAATAAAATGAAAATTATTTCATTTTAAAATAAAATGAAAATTATTTCATTTTAAAATAAAATGAAAATTA	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_4832:HG4_PB_HySA_11733:HG2_PB_HySA_14561:HG4_Ill_Krunchall_11567:HG3_Ill_Krunchall_10948:HG2_Ill_Krunchall_11228:HG2_PB_pbsv_7963:HG4_PB_pbsv_7992:HG3_PB_pbsv_7747:HG4_PB_assemblyticsfalcon_23979:HG4_PB_SVrefine2PBcRDovetail_3935:HG4_PB_SVrefine2Falcon1Dovetail_4878:HG4_Ill_svaba_10281:HG4_Ill_manta_1959:HG4_Ill_SVrefine2DISCOVARDovetail_5792:HG4_Ill_GATKHC_13156:HG4_Ill_GATKHCSBGrefine_5572:HG4_Ill_250bpfermikitraw_10956:HG4_Ill_150bpfermikitraw_10519:HG4_10X_allpass_1549:HG3_PB_SVrefine2PBcRDovetail_3656:HG3_PB_SVrefine2Falcon1Dovetail_4813:HG3_PB_HySA_12100:HG3_Ill_svaba_10243:HG3_Ill_manta_1870:HG3_Ill_SVrefine2DISCOVARDovetail_6007:HG3_Ill_MetaSV_4800:HG3_Ill_GATKHC_13035:HG3_Ill_GATKHCSBGrefine_5413:HG3_10X_allpass_1607:HG2_PB_SVrefine2PB10Xhap12_5781:HG2_PB_SVrefine2Falcon2Bionano_3918:HG2_PB_SVrefine2Falcon1plusDovetail_10935:HG2_Ill_svaba_10147:HG2_Ill_manta_2284:HG2_Ill_SpiralSDKrefine_15623:HG2_Ill_SVrefine2DISCOVARplusDovetail_11908:HG2_Ill_MetaSV_4628:HG2_Ill_GATKHC_13072:HG2_Ill_GATKHCSBGrefine_5485:HG2_Ill_250bpfermikitraw_10959:HG2_Ill_150bpfermikitraw_10306:HG2_10X_SVrefine210Xhap12_5680;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5680:HG2_Ill_150bpfermikitraw_10306:HG2_Ill_250bpfermikitraw_10959:HG2_Ill_GATKHCSBGrefine_5485:HG2_Ill_GATKHC_13072:HG2_Ill_MetaSV_4628:HG2_Ill_SVrefine2DISCOVARplusDovetail_11908:HG2_Ill_SpiralSDKrefine_15623:HG2_Ill_manta_2284:HG2_Ill_svaba_10147:HG2_PB_SVrefine2Falcon1plusDovetail_10935:HG2_PB_SVrefine2Falcon2Bionano_3918:HG2_PB_SVrefine2PB10Xhap12_5781:HG3_10X_allpass_1607:HG3_Ill_GATKHCSBGrefine_5413:HG3_Ill_GATKHC_13035:HG3_Ill_MetaSV_4800:HG3_Ill_SVrefine2DISCOVARDovetail_6007:HG3_Ill_manta_1870:HG3_Ill_svaba_10243:HG3_PB_HySA_12100:HG3_PB_SVrefine2Falcon1Dovetail_4813:HG3_PB_SVrefine2PBcRDovetail_3656:HG4_10X_allpass_1549:HG4_Ill_150bpfermikitraw_10519:HG4_Ill_250bpfermikitraw_10956:HG4_Ill_GATKHCSBGrefine_5572:HG4_Ill_GATKHC_13156:HG4_Ill_SVrefine2DISCOVARDovetail_5792:HG4_Ill_manta_1959:HG4_Ill_svaba_10281:HG4_PB_SVrefine2Falcon1Dovetail_4878:HG4_PB_SVrefine2PBcRDovetail_3935:HG4_PB_assemblyticsfalcon_23979;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.0185185;PBcalls=14;Illcalls=26;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=22;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-108;DistBack=32231;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=44;REFWIDENED=7:22202732-22202883;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:80:1/1:1:17:0:16:./.:0:0:0:0:1/1:0:53:./.:.:.:.:.:.
chr7	22434800	HG3_PB_SVrefine2Falcon1Dovetail_4814	ACACTCAGTAACACTCAGGGTAGGCCTCCTTGAGAAGATGACATCTGAGAAAGGACTTGGGAGTGAGGCCCCCTCCAGGAGTAGATGTTGGGCGTACTGAATGTAAGCCCTGGGCCCTCCTCCATGTGAGTCAATCAGTCTGGAAAGGACCTCCCACTCTACAAAGTTTCCAGCGCCTGAAAAGCAGGCTCTGTGTGCTTTTCTCCTTGCATGTTCTTCTCTTACACGACCGGATACTTAGTAATTGCTCAAAGTCCAGTGCATATGCTGGAACAGTCTCTTGGGCCTGCTCTGATTAGGGCTCTTTTTCTGGGCCAAACAAGACTCCGGTGGAACTCCAGACACAGACAGATTGGTGGTGCAACATTCTAGCAAGAGACGACATCAAGCAAGTTCTTAAAAATAATTCCCTGCCTTCATACACTTGGATTACAGTCTCTGTGTACATTCCCAAATGGGATGATGCACCTGTAACCCAATCAACTAAGAAACATTGTCAACAGTTTTCTGACCTGCGTAAGATTGTTATGTAATCTGGCCAGAAGTGCAGGTCTTTCTAATAATCCAGTGTAATCATCTTCAGCTCCTCCCTGTATCAGACCCATCCTGTATGCCTCTTTGCTTCACCTGTCTCCCAGGCCCTTAGCTGCTTGTGTCCTGCAGTAGCCATTGTTGAGCCCGATTCTAGGAGTGCAGCAGGCAGGTCAGCCTCACCTAAGCCCCATCTGTGGAGATGGATGCCCAAAGTCTCTACCATGCCTGGATTCCATGAAGCCCTGGGCCAATGGGTGCAAGATCTCTGTCACACCCGGGCCAGATGTTGCAGCAAGAAGTGCAGGGGCATGGAGGGAATGAGCGGGTAATTATCCTCTTTGTTCCAAAACCTCTCATGGCTTGTTCCAAGAACAGAGAGCACACAACACATAAAGGTAAAATGGTAAGAATTCTGCTTGTACTCCTGGGCACATGCCCCCCAAAGGTATCTCAGCTGTCCTTGCTCTATGCGTAAGACATAGCCATACAAATTCAAGATTAAATCCCATCCACAAGGCTTGATACTTCAACTTTTTCAATAATGACAAACATAAGGGACTCAGATTCCTTCCAGTGAAAAAGACTATATGATTTCTTTCGCTCCTAGAGTGCTTTAAAATGCATACCTCACTAACCCTCCACTTCCCTCTCCCTGTAGGAAATGAACAATAAATGATACTCCTTTAGGTTAGAGGCACTATCTTAGACACCATTAAGACACACACACGTGTGTGTGAGCTCTTTCCCCACTCACAAAACCCAGACAAATGCTTTTAAGCTCTTCTTTGAAATTTTTTAAAATTCAGATCATTTTCCAGGATTTTACTTGGCTGAATTCATCCAATGCTCTTTGTTTTTTCCATCATGGATCAGCAAAGGCAATTTTTCAGAATGACTCTGGAGGGATTATTTATTTAATGCTTTTCTTCCCTGAGAGGAACTTGCCTCTTTACCTCATTTTGAGCTGAATCTGACTGACTCAGTCTTGTGATAGAGGTTGGTGAGTGTAAATATCTAGTCTTTTTCGCAACAAAATAGAAAATCTACTTTTCATGACATGTTTCTTTTGCTCAGTGCAGGCTCCTGGGTTCCTATGTTCAAATTGCACACGGAGAGATTCTAGGAAAGTTTTGATGTCTTGAGGCTTACTAGTGCACTCCCGTCGATCTATCTGCCTAGTCTCAATAAGTATTTCTTTATAGAGCAGAAGAGGAGGAAATAACTCTTTACTATGGAAGCATACACCTTTGCAGGCCTCTGGGGGCTGATTATGAAGTTGTGTTATATGAGCATTGCCTTCAAAGCCTCGTTCTAGGCAAGCTGGTCTATGGAGAGTATCTAAGAATACAGGCTGTGTGCAGAGGTTTTCAAAGAGGGATTCTGTGCTCACTTTCAACACATCATTCCATGGCTGCTCCCCCGTCAAC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_7993:HG2_PB_assemblyticsfalcon_24537:HG4_Ill_Krunchall_11568:HG2_Ill_Krunchall_11229:HG2_10X_allpass_1333:HG2_PB_assemblyticsPBcR_23758:HG2_Ill_tnscope_914:HG4_PB_SVrefine2PBcRDovetail_3936:HG4_PB_SVrefine2Falcon1Dovetail_4879:HG4_Ill_SVrefine2DISCOVARDovetail_5794:HG4_Ill_MetaSV_4833:HG4_Ill_GATKHCSBGrefine_5573:HG4_10X_allpass_1550:HG3_PB_assemblyticsfalcon_24390:HG3_PB_SVrefine2Falcon1Dovetail_4814:HG2_PB_pbsv_7964:HG2_PB_SVrefine2Falcon2Bionano_3919:HG2_PB_SVrefine2Falcon1plusDovetail_10936:HG2_Ill_breakscan11_1155:HG2_Ill_SpiralSDKrefine_15624:HG2_Ill_MetaSV_4629:HG2_10X_SVrefine210Xhap12_5682;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5682:HG2_Ill_MetaSV_4629:HG2_Ill_SpiralSDKrefine_15624:HG2_Ill_breakscan11_1155:HG2_PB_SVrefine2Falcon1plusDovetail_10936:HG2_PB_SVrefine2Falcon2Bionano_3919:HG2_PB_pbsv_7964:HG3_PB_SVrefine2Falcon1Dovetail_4814:HG3_PB_assemblyticsfalcon_24390:HG4_10X_allpass_1550:HG4_Ill_GATKHCSBGrefine_5573:HG4_Ill_MetaSV_4833:HG4_Ill_SVrefine2DISCOVARDovetail_5794:HG4_PB_SVrefine2Falcon1Dovetail_4879:HG4_PB_SVrefine2PBcRDovetail_3936;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00306279;ClusterMaxSizeDiff=0.00306279;ClusterMaxEditDist=0.00459184;PBcalls=10;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1960;DistBack=15079;DistForward=-1958;DistMin=-1958;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=7:22434801-22436763;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3649.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:35:./.:10:13:23:9:./.:0:0:0:0:0/1:53:13:0/1:198:66:2050:.:.
chr7	22472858	HG4_Ill_250bpfermikitraw_10958	CTGTAACAGCCACAGGACACCTTCCCCCAACTTACTATTTCAAGCCCTTCCACCCCCTCCACATAATGACTCATTGTAACCCCAGGGAGAGAGGATTTTCCTGCTCACAAAAGCACAAAGACAGGTTAGGCCAAACCAGTTTCAAGGAGAGGAGATCTATGTAGGAAAGGGGACCCAAAT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3920:HG3_PB_pbsv_7748:HG4_PB_pbsv_7994:HG2_PB_pbsv_7965:HG4_PB_HySA_11734:HG4_PB_SVrefine2PBcRDovetail_3937:HG4_PB_SVrefine2Falcon1Dovetail_4880:HG4_Ill_SVrefine2DISCOVARDovetail_5795:HG4_Ill_250bpfermikitraw_10958:HG4_Ill_150bpfermikitraw_10521:HG4_10X_allpass_1551:HG3_PB_SVrefine2PBcRDovetail_3657;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3920:HG4_PB_SVrefine2PBcRDovetail_3937:HG4_PB_SVrefine2Falcon1Dovetail_4880:HG4_Ill_SVrefine2DISCOVARDovetail_5795:HG4_Ill_250bpfermikitraw_10958:HG4_Ill_150bpfermikitraw_10521:HG4_10X_allpass_1551:HG3_PB_SVrefine2PBcRDovetail_3657;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0167131;ClusterMaxSizeDiff=0.0167131;ClusterMaxEditDist=0.0224719;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-179;DistBack=21504;DistForward=-179;DistMin=-179;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=182;REFWIDENED=7:22472859-22473219;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:31:./.:28:5:9:26:./.:0:0:0:0:0/1:16:11:./.:.:.:.:.:.
chr7	23095966	HG2_Ill_GATKHCSBGrefine_5487	TAAAATTCAAAATGTTAACATAACCAAATGCTGGTGAGGATTTGGTGGAGCAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1156:HG2_PB_HySA_14573:HG2_PB_assemblyticsPBcR_23770:HG2_PB_assemblyticsfalcon_24548:HG4_Ill_Spiral_653:HG3_Ill_Spiral_8579:HG2_Ill_Spiral_570:HG4_Ill_svaba_10290:HG4_Ill_scalpel_7579:HG4_Ill_SVrefine2DISCOVARDovetail_5797:HG4_Ill_Krunchall_11578:HG4_Ill_GATKHC_13171:HG4_Ill_GATKHCSBGrefine_5575:HG4_Ill_250bpfermikitraw_10970:HG4_Ill_150bpfermikitraw_10535:HG4_CG_vcfBeta_5241:HG3_Ill_svaba_10251:HG3_Ill_scalpel_7832:HG3_Ill_manta_1871:HG3_Ill_Krunchall_10960:HG3_Ill_GATKHC_13054:HG3_Ill_GATKHCSBGrefine_5415:HG3_Ill_250bpfermikitraw_10649:HG3_Ill_150bpfermikitraw_10366:HG3_CG_vcfBeta_4461:HG3_10X_allpass_1608:HG2_PB_pbsv_7969:HG2_PB_SVrefine2PB10Xhap12_5784:HG2_PB_SVrefine2Falcon2Bionano_3923:HG2_PB_SVrefine2Falcon1plusDovetail_10939:HG2_Ill_svaba_10156:HG2_Ill_manta_2285:HG2_Ill_SpiralSDKrefine_15635:HG2_Ill_SVrefine2DISCOVARplusDovetail_11913:HG2_Ill_Krunchall_11242:HG2_Ill_GATKHC_13092:HG2_Ill_GATKHCSBGrefine_5487:HG2_Ill_FB_7160:HG2_Ill_250bpfermikitraw_10971:HG2_Ill_150bpfermikitraw_10320:HG2_CG_vcfBeta_4675:HG2_10X_SVrefine210Xhap12_5686;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5686:HG2_CG_vcfBeta_4675:HG2_Ill_150bpfermikitraw_10320:HG2_Ill_250bpfermikitraw_10971:HG2_Ill_FB_7160:HG2_Ill_GATKHCSBGrefine_5487:HG2_Ill_GATKHC_13092:HG2_Ill_Krunchall_11242:HG2_Ill_SVrefine2DISCOVARplusDovetail_11913:HG2_Ill_SpiralSDKrefine_15635:HG2_Ill_manta_2285:HG2_Ill_svaba_10156:HG2_PB_SVrefine2Falcon1plusDovetail_10939:HG2_PB_SVrefine2Falcon2Bionano_3923:HG2_PB_SVrefine2PB10Xhap12_5784:HG2_PB_pbsv_7969:HG3_10X_allpass_1608:HG3_CG_vcfBeta_4461:HG3_Ill_150bpfermikitraw_10366:HG3_Ill_250bpfermikitraw_10649:HG3_Ill_GATKHCSBGrefine_5415:HG3_Ill_GATKHC_13054:HG3_Ill_Krunchall_10960:HG3_Ill_manta_1871:HG3_Ill_scalpel_7832:HG3_Ill_svaba_10251:HG4_CG_vcfBeta_5241:HG4_Ill_150bpfermikitraw_10535:HG4_Ill_250bpfermikitraw_10970:HG4_Ill_GATKHCSBGrefine_5575:HG4_Ill_GATKHC_13171:HG4_Ill_Krunchall_11578:HG4_Ill_SVrefine2DISCOVARDovetail_5797:HG4_Ill_scalpel_7579:HG4_Ill_svaba_10290;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0571429;PBcalls=7;Illcalls=30;TenXcalls=2;CGcalls=3;PBexactcalls=4;Illexactcalls=26;TenXexactcalls=2;CGexactcalls=3;HG2count=21;HG3count=11;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-52;DistBack=5280;DistForward=29927;DistMin=5280;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:23095967-23096020;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:57:1/1:2:22:1:29:./.:0:0:0:0:1/1:0:68:./.:.:.:.:.:.
chr7	23850041	HG2_Ill_Krunchall_11245	ATCTACCATTGTATTACTGGTTTTGTTTGTTTCTTGTTTCTTTTTCTTTTTTTCCCTTCCTGTGCATTACTTGAAAAAATTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5691:HG2_PB_HySA_14581:HG3_Ill_Krunchall_10963:HG4_PB_pbsv_8004:HG2_PB_pbsv_7976:HG3_PB_pbsv_7758:HG3_PB_HySA_12113:HG4_PB_SVrefine2Falcon1Dovetail_4887:HG4_Ill_manta_1960:HG4_Ill_SVrefine2DISCOVARDovetail_5802:HG4_Ill_Krunchall_11580:HG4_Ill_GATKHCSBGrefine_5582:HG4_Ill_250bpfermikitraw_10973:HG4_10X_allpass_1553:HG3_PB_assemblyticsfalcon_24408:HG3_PB_SVrefine2PBcRDovetail_3661:HG3_Ill_scalpel_7836:HG3_Ill_SVrefine2DISCOVARDovetail_6017:HG3_Ill_GATKHCSBGrefine_5417:HG3_Ill_250bpfermikitraw_10652:HG3_Ill_150bpfermikitraw_10369:HG2_PB_SVrefine2PB10Xhap12_5788:HG2_PB_SVrefine2Falcon2Bionano_3926:HG2_PB_SVrefine2Falcon1plusDovetail_10943:HG2_Ill_scalpel_7721:HG2_Ill_manta_2286:HG2_Ill_SpiralSDKrefine_15640:HG2_Ill_SVrefine2DISCOVARplusDovetail_11918:HG2_Ill_Krunchall_11245:HG2_Ill_GATKHCSBGrefine_5490:HG2_Ill_250bpfermikitraw_10975:HG2_Ill_150bpfermikitraw_10323;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5691:HG4_PB_SVrefine2Falcon1Dovetail_4887:HG4_Ill_manta_1960:HG4_Ill_SVrefine2DISCOVARDovetail_5802:HG4_Ill_Krunchall_11580:HG4_Ill_GATKHCSBGrefine_5582:HG4_Ill_250bpfermikitraw_10973:HG4_10X_allpass_1553:HG3_PB_assemblyticsfalcon_24408:HG3_PB_SVrefine2PBcRDovetail_3661:HG3_Ill_scalpel_7836:HG3_Ill_SVrefine2DISCOVARDovetail_6017:HG3_Ill_GATKHCSBGrefine_5417:HG3_Ill_250bpfermikitraw_10652:HG3_Ill_150bpfermikitraw_10369:HG2_PB_SVrefine2PB10Xhap12_5788:HG2_PB_SVrefine2Falcon2Bionano_3926:HG2_PB_SVrefine2Falcon1plusDovetail_10943:HG2_Ill_scalpel_7721:HG2_Ill_manta_2286:HG2_Ill_SpiralSDKrefine_15640:HG2_Ill_SVrefine2DISCOVARplusDovetail_11918:HG2_Ill_Krunchall_11245:HG2_Ill_GATKHCSBGrefine_5490:HG2_Ill_250bpfermikitraw_10975:HG2_Ill_150bpfermikitraw_10323;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0368098;ClusterMaxSizeDiff=0.0368098;ClusterMaxEditDist=0.0372671;PBcalls=11;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-81;DistBack=1451;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=82;REFWIDENED=7:23850042-23850204;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3652.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:61:1/1:4:19:3:24:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr7	23944130	HG4_Ill_scalpel_7583	CGTGGTCTCACTGGCTTCAGGAGTGAAGCTGCAGACCTTCGCTGTGAGTGTTACAGCTCTTAAGGCCGCGCGTCTGAAGTTGTTTGTTCCTCCGGGTGG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5693:HG4_PB_assemblyticsfalcon_24002:HG2_PB_pbsv_7978:HG4_PB_pbsv_8006:HG3_PB_pbsv_7760:HG4_PB_SVrefine2Falcon1Dovetail_4888:HG4_Ill_svaba_10293:HG4_Ill_scalpel_7583:HG4_Ill_GATKHCSBGrefine_5584:HG4_Ill_250bpfermikitraw_10976:HG3_Ill_svaba_10255:HG3_Ill_scalpel_7837:HG3_Ill_GATKHCSBGrefine_5419:HG2_Ill_svaba_10162:HG2_Ill_scalpel_7722:HG2_Ill_GATKHCSBGrefine_5492:HG2_Ill_250bpfermikitraw_10977:HG3_PB_SVrefine2PBcRDovetail_3663;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_10977:HG2_Ill_GATKHCSBGrefine_5492:HG2_Ill_scalpel_7722:HG2_Ill_svaba_10162:HG3_Ill_GATKHCSBGrefine_5419:HG3_Ill_scalpel_7837:HG3_Ill_svaba_10255:HG4_Ill_250bpfermikitraw_10976:HG4_Ill_GATKHCSBGrefine_5584:HG4_Ill_scalpel_7583:HG4_Ill_svaba_10293:HG4_PB_SVrefine2Falcon1Dovetail_4888;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0497512;ClusterMaxSizeDiff=0.0497512;ClusterMaxEditDist=0.138614;PBcalls=6;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-98;DistBack=3735;DistForward=93932;DistMin=3735;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=186;REFWIDENED=7:23944007-23944290;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3653.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:29:0|1:32:2:0:24:./.:0:0:0:0:0/1:32:9:./.:.:.:.:.:.
chr7	24038161	HG4_10X_allpass_1554	AATATGCATGTGTGTGTGTGGCACACACACACACACACAGACACACATGCACAGAAGGCATGATTTTAGCAGCCTACAAGTATGGATCTGGAAGAGCTTTCAATATTGTTATTTACAATCAGTGCTAGATTTGGGGACTCAGTGCCAAGGTTTAAATCTAGTAATGGGAACAGCAATACTCTATAGATTATTCTTAGAAAGATGGAGCCACAGTTTCTGAATGCTTTCTACAACAATGAAATGAGACTAGAATAAGATAGATAGAATTACTTAAACAAAGTCGTGTAAGGAAATTACAGTCTCCCTAGTTAGGGACAACATAGAAACAAGGACAAATGAGGATGGGGATGTGGGGTAGATCCACCTGTCCAGATACTAACCGCACGTCAAGGTGATTCATAGTTAGATGTGAAGTAAACAGTAGAAAGGATTATCCACCCAAATTCCATTAAGGAAAATGATCCCTCAAGAATTACTGAAAGAGTATCTAATTTTAAAGTCTGTAAAAGGATTTACGAGATGAAGAGTTTGCTATTTATAGAAATAAATCCTATTAAAAAAACCTTTTTGTATCTTAATAAATCTTTGTAGCACACTTAATAAATACACTCTTTGTAGCACACTTGATCTTTATAATTCCAGGAGTCCAAGTTGTTCAGCTCCCGTGTTTTGTTTAAGGAAACACAGTTCAATAGGTATTAAAAAATAACTAAAATATTTTACTTGCATTTCTCATCGAACAGCAAAAGTGTGTGTGATCACTACTGGTTTCCCAACCCCCTCTAATTTTCTGCCAACACACAGATTAGTAACACTCCCCTTTTTCCTCACTCTTCCCACCCTCTTATTATGTACAATGACTCAGTGGCTCATCAACTTGAGCCCTCTTTCTTGAGATGAGGAGGGGGCCACTGGGTGAGAAGAAGATGATGGTGATGTGGGTAGCGGAGGTGTGAATATTAGTGTTAAATTTTACCCTAATAACCTTGGAGTGTGATCTATAATCACACCATTCAGGATTAAGGTTTCTTTGGTATTCTTTTAGAGTCTGTATTTTGGTCATACTGGGCTACTTTTAGATTTCCCAAAGTATCACACCGTCTCTCATCTTTAGGCCTTCATTTTGCCTGTTTTTTCCCTCTGGTTTGCTGTGTTGTCTACTGGAACACTTTCTTTCTTTACCTTTACCTTTCTTTAGCTGACTCTTTCCCTTTAGATTTTAAATGAAACATCACTTTCCCCTGAATGCCTCCCCTGGTCCCAGCACTGGTCAGACACCCCTTCTATGTACTCTCATGAATCCTCTGACTCACCTTTCAAAGCACTTCTGTCACTGCATTGTAATCGCCTGTTTAGGTGTCCGTATTCGGAATTTCTCCCCTGGCCAAGAGTTGCATTTTTAAAGCATGCCCTGAGGCATAGCAGATATTCAGTAAATATTTCTTGAAGATATAAATAAGTTACCTTTATATTCTGTACTGTGGTTGAAATTATGGTGTACATACATTTTAACTTAATAGTCTAAATATTTGGTCATGTCATTAAAATTTCTGTAATAAGCATAATTTTAAATTGCTGCATTATATTTTATTATATAGATATATCATACTTTAAGCAAGGCGTTGGCAAACTTTTTACAAAGGATCTGATAGCAAATGTTTTCGGCTTTTGAACCGTATGGTTTCTTTTGGTACTACTGAACTCTGCCTACTTAGTATGAAAACAGCCACAGATAGTATGTAAACAAATAGGCATGCCTATGCGCTAATAAAATAGCCAGTGGGTTGGAATTGATTCATAGGCTGCTGTCTACAGCCTACCCCTGAGTTAAATAATAATTATTCTATTTGTGAATTTTGATTTCCCCATTTTTTATTATTATAAATGATATTCCAATGAATATATTGACT	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_915:HG2_10X_allpass_1334:HG4_PB_assemblyticsfalcon_24003:HG3_PB_assemblyticsfalcon_24411:HG2_PB_assemblyticsfalcon_24558:HG2_PB_assemblyticsPBcR_23781:HG4_Ill_Krunchall_11582:HG3_Ill_Krunchall_10965:HG2_Ill_Krunchall_11247:HG4_PB_pbsv_8007:HG4_PB_SVrefine2PBcRDovetail_3943:HG4_PB_SVrefine2Falcon1Dovetail_4889:HG4_Ill_SVrefine2DISCOVARDovetail_5804:HG4_Ill_MetaSV_4836:HG4_Ill_GATKHCSBGrefine_5585:HG4_10X_allpass_1554:HG3_PB_pbsv_7761:HG3_PB_SVrefine2PBcRDovetail_3664:HG3_PB_SVrefine2Falcon1Dovetail_4821:HG3_Ill_MetaSV_4804:HG3_Ill_GATKHCSBGrefine_5420:HG3_10X_allpass_1609:HG2_PB_pbsv_7979:HG2_PB_SVrefine2PB10Xhap12_5790:HG2_PB_SVrefine2Falcon2Bionano_3928:HG2_PB_SVrefine2Falcon1plusDovetail_10945:HG2_Ill_SpiralSDKrefine_15643:HG2_Ill_SVrefine2DISCOVARplusDovetail_11920:HG2_Ill_MetaSV_4631:HG2_Ill_GATKHCSBGrefine_5493:HG2_10X_SVrefine210Xhap12_5694:HG2_Ill_breakscan11_1157;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5694:HG2_Ill_GATKHCSBGrefine_5493:HG2_Ill_MetaSV_4631:HG2_Ill_SVrefine2DISCOVARplusDovetail_11920:HG2_Ill_SpiralSDKrefine_15643:HG2_PB_SVrefine2Falcon1plusDovetail_10945:HG2_PB_SVrefine2Falcon2Bionano_3928:HG2_PB_SVrefine2PB10Xhap12_5790:HG2_PB_pbsv_7979:HG3_10X_allpass_1609:HG3_Ill_GATKHCSBGrefine_5420:HG3_Ill_MetaSV_4804:HG3_PB_SVrefine2Falcon1Dovetail_4821:HG3_PB_SVrefine2PBcRDovetail_3664:HG3_PB_pbsv_7761:HG4_10X_allpass_1554:HG4_Ill_GATKHCSBGrefine_5585:HG4_Ill_MetaSV_4836:HG4_Ill_SVrefine2DISCOVARDovetail_5804:HG4_PB_SVrefine2Falcon1Dovetail_4889:HG4_PB_SVrefine2PBcRDovetail_3943;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0036678;ClusterMaxSizeDiff=0.0036678;ClusterMaxEditDist=0.0036678;PBcalls=14;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1909;DistBack=93932;DistForward=-1906;DistMin=-1906;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=7:24038162-24040074;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3654.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:0:11:0:30:./.:0:0:0:0:1/1:0:41:1/1:5:101:2271:.:.
chr7	24677925	HG2_PB_SVrefine2PB10Xhap12_5792	TCAATTTCTGTATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1158:HG2_10X_allpass_1335:HG3_Ill_Krunchall_10975:HG2_Ill_Krunchall_11254:HG2_PB_assemblyticsPBcR_23787:HG2_PB_pbsv_7982:HG2_PB_SVrefine2PB10Xhap12_5793:HG2_PB_PB10Xdip_27223:HG2_PB_HySA_14591:HG3_PB_pbsv_7764:HG3_Ill_MetaSV_4805:HG2_Ill_tnscope_916:HG2_Ill_MetaSV_4632:HG4_PB_assemblyticsfalcon_24008:HG4_PB_SVrefine2Falcon1Dovetail_4891:HG3_PB_SVrefine2PBcRDovetail_3666:HG3_Ill_scalpel_7841:HG3_Ill_manta_1873:HG3_Ill_SVrefine2DISCOVARDovetail_6023:HG3_Ill_GATKHCSBGrefine_5422:HG3_10X_allpass_1610:HG2_PB_SVrefine2PB10Xhap12_5792:HG2_PB_SVrefine2Falcon2Bionano_3930:HG2_Ill_scalpel_7726:HG2_Ill_manta_2288:HG2_Ill_GATKHCSBGrefine_5496:HG2_10X_SVrefine210Xhap12_5696;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5696:HG2_Ill_GATKHCSBGrefine_5496:HG2_Ill_manta_2288:HG2_Ill_scalpel_7726:HG2_PB_SVrefine2Falcon2Bionano_3930:HG2_PB_SVrefine2PB10Xhap12_5792:HG3_10X_allpass_1610:HG3_Ill_GATKHCSBGrefine_5422:HG3_Ill_SVrefine2DISCOVARDovetail_6023:HG3_Ill_manta_1873:HG3_Ill_scalpel_7841:HG3_PB_SVrefine2PBcRDovetail_3666:HG4_PB_SVrefine2Falcon1Dovetail_4891:HG4_PB_assemblyticsfalcon_24008;NumExactMatchSVs=14;ClusterMaxShiftDist=0.104265;ClusterMaxSizeDiff=0.104265;ClusterMaxEditDist=0.104265;PBcalls=11;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=70206;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=7:24677926-24678265;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3655.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:43:0|1:23:0:0:49:./.:0:0:0:0:0/1:26:25:0/1:26:10:.:.:.
chr7	24813858	HG3_Ill_GATKHCSBGrefine_5423	TTCCCTCTCCCTCCCTCCCTCCCTTCTTCCCTCCCTCCCTCCCTTCCTCCCTCCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_7765:HG2_PB_HySA_14592:HG3_PB_SVrefine2PBcRDovetail_3667:HG3_Ill_svaba_10261:HG3_Ill_scalpel_7842:HG3_Ill_SVrefine2DISCOVARDovetail_6024:HG3_Ill_Krunchall_10976:HG3_Ill_GATKHC_13070:HG3_Ill_GATKHCSBGrefine_5423:HG3_Ill_250bpfermikitraw_10662:HG3_Ill_150bpfermikitraw_10378:HG2_PB_pbsv_7983:HG2_PB_SVrefine2Falcon2Bionano_3931:HG2_PB_SVrefine2Falcon1plusDovetail_10947:HG2_Ill_svaba_10166:HG2_Ill_scalpel_7727:HG2_Ill_manta_2289:HG2_Ill_SpiralSDKrefine_15646:HG2_Ill_SVrefine2DISCOVARplusDovetail_11923:HG2_Ill_Krunchall_11255:HG2_Ill_GATKHC_13106:HG2_Ill_GATKHCSBGrefine_5497:HG2_Ill_250bpfermikitraw_10987:HG2_Ill_150bpfermikitraw_10333:HG2_10X_SVrefine210Xhap12_5697:HG3_PB_HySA_12125;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5697:HG2_Ill_150bpfermikitraw_10333:HG2_Ill_250bpfermikitraw_10987:HG2_Ill_GATKHCSBGrefine_5497:HG2_Ill_GATKHC_13106:HG2_Ill_Krunchall_11255:HG2_Ill_SVrefine2DISCOVARplusDovetail_11923:HG2_Ill_SpiralSDKrefine_15646:HG2_Ill_manta_2289:HG2_Ill_scalpel_7727:HG2_Ill_svaba_10166:HG2_PB_SVrefine2Falcon1plusDovetail_10947:HG2_PB_SVrefine2Falcon2Bionano_3931:HG2_PB_pbsv_7983:HG3_Ill_150bpfermikitraw_10378:HG3_Ill_250bpfermikitraw_10662:HG3_Ill_GATKHCSBGrefine_5423:HG3_Ill_GATKHC_13070:HG3_Ill_Krunchall_10976:HG3_Ill_SVrefine2DISCOVARDovetail_6024:HG3_Ill_scalpel_7842:HG3_Ill_svaba_10261:HG3_PB_SVrefine2PBcRDovetail_3667;NumExactMatchSVs=23;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.036036;PBcalls=7;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=-35;DistForward=-1;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=69;REFWIDENED=7:24813859-24813981;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3656.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:36:./.:18:8:2:21:./.:0:0:0:0:0/1:11:25:./.:.:.:.:.:.
chr7	25044601	HG2_10X_SVrefine210Xhap12_5698	TGAGAAACTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_8590:HG2_PB_assemblyticsPBcR_23789:HG4_Ill_Krunchall_11593:HG3_Ill_Krunchall_10978:HG2_Ill_Krunchall_11258:HG4_PB_assemblyticsfalcon_24009:HG3_PB_assemblyticsfalcon_24418:HG2_PB_assemblyticsfalcon_24566:HG4_Ill_Spiral_655:HG2_Ill_Spiral_571:HG2_PB_HySA_14593:HG4_Ill_MetaSV_4839:HG2_Ill_tnscope_917:HG2_Ill_MetaSV_4633:HG4_PB_pbsv_8011:HG4_PB_SVrefine2PBcRDovetail_3946:HG4_PB_SVrefine2Falcon1Dovetail_4892:HG4_Ill_svaba_10301:HG4_Ill_scalpel_7588:HG4_Ill_manta_1964:HG4_Ill_SVrefine2DISCOVARDovetail_5807:HG4_Ill_GATKHCSBGrefine_5588:HG4_10X_allpass_1556:HG3_PB_pbsv_7766:HG3_PB_SVrefine2PBcRDovetail_3668:HG3_PB_SVrefine2Falcon1Dovetail_4823:HG3_PB_HySA_12128:HG3_Ill_svaba_10263:HG3_Ill_scalpel_7844:HG3_Ill_manta_1874:HG3_Ill_SVrefine2DISCOVARDovetail_6025:HG3_Ill_MetaSV_4806:HG3_Ill_GATKHCSBGrefine_5424:HG3_10X_allpass_1611:HG2_PB_pbsv_7984:HG2_PB_SVrefine2PBcRplusDovetail_10147:HG2_PB_SVrefine2PB10Xhap12_5794:HG2_PB_SVrefine2Falcon2Bionano_3932:HG2_PB_SVrefine2Falcon1plusDovetail_10948:HG2_Ill_svaba_10169:HG2_Ill_scalpel_7729:HG2_Ill_manta_2290:HG2_Ill_SVrefine2DISCOVARplusDovetail_11924:HG2_Ill_GATKHCSBGrefine_5498:HG2_10X_allpass_1336:HG2_10X_SVrefine210Xhap12_5698:HG2_Ill_breakscan11_1159;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5698:HG2_10X_allpass_1336:HG2_Ill_GATKHCSBGrefine_5498:HG2_Ill_SVrefine2DISCOVARplusDovetail_11924:HG2_Ill_manta_2290:HG2_Ill_scalpel_7729:HG2_Ill_svaba_10169:HG2_PB_SVrefine2Falcon1plusDovetail_10948:HG2_PB_SVrefine2Falcon2Bionano_3932:HG2_PB_SVrefine2PB10Xhap12_5794:HG2_PB_SVrefine2PBcRplusDovetail_10147:HG2_PB_pbsv_7984:HG3_10X_allpass_1611:HG3_Ill_GATKHCSBGrefine_5424:HG3_Ill_MetaSV_4806:HG3_Ill_SVrefine2DISCOVARDovetail_6025:HG3_Ill_manta_1874:HG3_Ill_scalpel_7844:HG3_Ill_svaba_10263:HG3_PB_HySA_12128:HG3_PB_SVrefine2Falcon1Dovetail_4823:HG3_PB_SVrefine2PBcRDovetail_3668:HG3_PB_pbsv_7766:HG4_10X_allpass_1556:HG4_Ill_GATKHCSBGrefine_5588:HG4_Ill_SVrefine2DISCOVARDovetail_5807:HG4_Ill_manta_1964:HG4_Ill_scalpel_7588:HG4_Ill_svaba_10301:HG4_PB_SVrefine2Falcon1Dovetail_4892:HG4_PB_SVrefine2PBcRDovetail_3946:HG4_PB_pbsv_8011;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0707692;ClusterMaxSizeDiff=0.0707692;ClusterMaxEditDist=0.0707692;PBcalls=17;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=25147;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=7:25044602-25044942;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:1/1:0:33:0:27:./.:0:0:0:0:1/1:0:42:./.:1:20:2865:.:.
chr7	26043817	HG4_Ill_150bpfermikitraw_10552	CTTTTTTTTTTTTTTAATACCTTATACTCACAGTCTTTTCTTTTTTCTTTCTTTCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5702:HG2_PB_pbsv_7990:HG4_PB_HySA_11763:HG2_Ill_Spiral_572:HG4_Ill_scalpel_7591:HG4_Ill_manta_1965:HG4_Ill_Krunchall_11602:HG4_Ill_GATKHC_13194:HG4_Ill_GATKHCSBGrefine_5591:HG4_Ill_250bpfermikitraw_10993:HG4_Ill_150bpfermikitraw_10552:HG4_10X_allpass_1558:HG2_Ill_scalpel_7734:HG2_Ill_manta_2291:HG2_Ill_SpiralSDKrefine_15658:HG2_Ill_Krunchall_11266:HG2_Ill_GATKHC_13118:HG2_Ill_GATKHCSBGrefine_5501:HG2_Ill_250bpfermikitraw_10997:HG2_Ill_150bpfermikitraw_10343:HG4_PB_pbsv_8015:HG2_PB_assemblyticsfalcon_24575:HG2_PB_SVrefine2PBcRplusDovetail_10151;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10343:HG2_Ill_250bpfermikitraw_10997:HG2_Ill_GATKHCSBGrefine_5501:HG2_Ill_GATKHC_13118:HG2_Ill_Krunchall_11266:HG2_Ill_SpiralSDKrefine_15658:HG2_Ill_manta_2291:HG2_Ill_scalpel_7734:HG4_10X_allpass_1558:HG4_Ill_150bpfermikitraw_10552:HG4_Ill_250bpfermikitraw_10993:HG4_Ill_GATKHCSBGrefine_5591:HG4_Ill_GATKHC_13194:HG4_Ill_Krunchall_11602:HG4_Ill_manta_1965:HG4_Ill_scalpel_7591;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0540541;PBcalls=5;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-55;DistBack=40453;DistForward=-36;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=7:26043784-26043909;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3658.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:19:0|1:16:1:1:16:./.:0:0:0:0:0/1:13:13:./.:.:.:.:.:.
chr7	26137000	HG2_Ill_SVrefine2DISCOVARplusDovetail_11928	TTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGTGCGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAGGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCCACCACACCCAGCTAATTGTTGTATTTTTTAGTGGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTCCAACTCCTGACCTCGTGATCCACCCACCTCAGCCTCCTAAAGTGCTGGGATTACAGACGTGAGCCACCGTGCCTGGCTGAGTCATCATTTCTTAACATTTCTTACAACCAGTCCTTTTCACTAGACTCATTCATTGCATCAGAATATCTACAACCTTGGGCAAGTTACTGAACCTGGGTAGGGGAAGAGGGAGAATATCTACAACCTTGGGGTTGAGAGGAGGAGGGAGAATATCTACAACCTATTAAGACAACCAGAAGCAACCACAAGGATTCCTAGGCCAATACTTCTAAGCCAATTCTGGAAAATATCGTAGAGAAGGGTCGAAGTGGGGTTTTCTGGTAGCACAGGGAATAGTGGTACACACAGGAAAGAGTCTATGTCACTGGGTTTGTATTGTCTTGCAGAGATAATTCATTCCCCAGTGGTTGTCAAAATAACATACCAAGGATCAAAATCATAGCTGTTTGTGCCTGTGGCTGTTTGCACATGGAGGTCAAATGGTGTTCCCTCATTTACCATGGGTAGTAGGGCATAAATGTCCTCTAACTGTCCCAGTTTGCATGGAACTGTCACGGTTTCAGCACTGGCAGCCCCACGTCCCAGGAAACTGCTCAGTTCAAGGCAAACCAGAACAAACCATTGGTCAGAGGAAAAGGAAGCCCACATGAGGCCATAAGATATATTTCAGCTGCCCATCGAGAATGGAAGCCAGCAATCCTGACATCAGCCATTAGGTCATTTTGTTCTACCTGGCTGGTGTTCACCTCCAAGAACTTTCCCAAGCTTGTGACCCAACATGGTAAGAGAAGAAAATGACAGTAAGCTCTGGGCCCCCACTGTGGTGTGAAGCTTGAGCTATGCCACACTGCCTTCCTGGGCCTCAGAGATATAATGCGTAGGTGAGGAGCTGCACCAAATCAGTGTTTTCAAACTCCAGACAACAGTTTGATTTTCATGGGCCAGGAAATCAATGTAGTGGCTTGCAAACAGCATTTTAAAATAATAGAATAAAATGGAATATGTGAGAGGGCATTGCACGTGGCAAGGAAATATTGTTTGTAAAATATGTTTCAGCTACATATCTATGTCCATGTGTACTGGGTCTCAGTGTAAAATCTAGTGCTTAGTGTGGGTTGCAAAGTCCATACATGGAACAATCTCCAAACTTTCTACCAGCTCCAGAATTTTGTATCCTACAGAAGTCATCCTAATAATTTCTTCTCTTATACGTGTCATGAGATTTGGTAACTAGAGTGCGTGGGACTTCCTTCACTGGGCATTGGGTTATATTATTTTTATAAATTGTTTTTCTCTTTTATTATTGTAAGGAAAAGTTGTCCTTCACCTATTTATAGCACCCAGCACGGAGTCTTACAGTTAGGTCACTGTCAATAAATGGTTCTTATCTCTTTTTTTTTTTTTTTTTTTGAGACAGTCTCACTTGTCACTCAGGCTGGAGTGCTGTGGAACAATTACAGCTCTCTGCAGCCTCGACCTCCCAGGCTAAATCAATGTGCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTGTGCCACCATGCCCAGCTAATAATTTTTATTTTTTGTAGAGACAGGGTCTCCCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGCGATCCTCCTGCCTCAGCCTTCCAAAGTGCTAGGATTACAGGCATGAGCCAAATGCCCAGCCAAGAAATGTGTCTTATATTCCAACATACCAACAAGAACACACTCAAACATCATCATTGGTGCCATCTTCCAGCTCCAGCAAAAGCAGAAGTCCCAGGGCTGGATGGTTGTCTCAGACAGCAAGAGCATGGGCTCTTGAACAATTTTGCCTTTCAACTGGAGAGAACTCGGCCCAGTAAAGGCCACAGTGATGCAACAGCAGCCACTGCAGACGCAAGTCTGACCCTGAGGTAAGATGCTGTTTCAGCCAGGTGCGATGGCTCAGGCCTGTAATCCCAGCACTTCGGGAGGCTGAGGTGGGCGGATCACAAGGTCAGGAGTTCGAGACCAGCCTGACTAATATGGTGAAACCCCATCTCTACTAAAAAATACAAAAAAAATTAGCTGGGCATGATGGTGCGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCTGAGGTCGCACCACTGCACTCCAGCCTGGGCTACAGAGTGAGACTCTGTCTCAAAAAAAAAAAGAAAAAAGAAAAAGAAAAAAAAAGACTCTTTTCAAGAACAACCTGGTTCAACTGCTGAAGAGATGAACACACAAGGGAAAAGCAAAGGAGAAAAAAGAAGGAAAAGATAGATCTAGAATGAAAAACAGGTACGCACTAATCACACACCAATGATGACTTCCTGTTTTTGTTTTTGTTTTTGAGACTGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACTTCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGCACGTACCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAAACAGGGTTTCACCATATTGGCCAGACTGGTCTTGAACTCCTGACCTCGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCGGCTAATGACTTCTAGGAGGGTGAAATATGACAGGCACTGCCTGTGCATTGACAGGAAGTATGATTTTATGGATTGTCACTCTATAATGGCAGGGTATAGAAAGAATAAAGGTTAGCAATTTTTACATAACAAATCTATTAGGGAACCCTTTTGTTTTCTACTCTGCCCCGCCACCAAAAGTTATGCAGGAATTTCCATATAATCAGGACTTCAACTAAAAATTTCTGCATCCTGAAAAGGAAAAATGTCATTTCCTCTTAAATCACACTTATTTCCATGGGTAATTCTGAAGTTTGTTAAAAGGACAGAAATGGAGAAGGTTCATATTTATGGTTCCCAGTCTTTTAAAAAATTAGGAAGTGAAATTGCTTCTCCAAAATATAAGAACAGATCAGAAATTAAAACTTAAGAGGCCCACTGCAGTGGTTCACGCCTGTAATCCCCGCACTTTGGGAGGTGGAGGCGGGAGGATCACTTGAGTCCAGGAGTTCAACACCAGCCTGGGCAATATAGTGAGACCCCCCTCCCCCCACCCGCAATCTCTTCAAAATGACATTTAAAATGTATTTTTAAAATTAAGACATTAAAACTTAACTTTTTACAAGCATAAAATTAGGCCACATCACGAGCATGGCTGGCCATGGGATGGGCTCATGCCCAAATGAGGGTGCCCAAGCCCCTGGGGCCACATCCCACACAGGGGAGGAAACTCCATCCCAGTAAGAGAAATGACGTGATATGGACTTTGCTGGCAGGGGCGAGGGGTCGTCCAGGCGGGTGCGGAGGGACACAGTGTGTGGAGACAGGCAGTTGAGCTGTTCTAGCCAGGACCTGCCGCCTTTGAAAAACAAGACCTAAGGAAACGACCACAGGCTCAGAATCCCAGGCTAAGCTAAACAGCTCGATCTCAGGAAAGAGGAACTGATGCAGTTGAGAACCGGCCGTTCTCTTTTCTGCTGTCTGTACTTTTTATTATGTTCCTTTAAACTACTTGTTACGGGAACTTAATTTTTAACAACTATGTAATAAATCCAACAAAACTATGAAACTAACACCTAAGTTCCTCATGCTTTTTCAGTACCCATCGCTGGACTCCAAATTTCCAAATTCCCAATGAAGGAACCAGCTCCTGTCTCCCAGCAACACACGCCGCTAGCCTGACCAGGGCGGAATGTTTTGGGGTCAAACTTATCCAATCAGCCGAGGGTAGGGAGAGAAATGGTGCCCCAGGGACCCAGCGTGGCTGCTTAGACAGCGGGGCCGAGGGTAGGCAGGGGCCACCAGTCTGCGTGACCCCTGCAGTTTCAGGAAGTACGATAGCAGGAAACGGGCAGAGCTCAGATGAGACCCAAGTCCAGGGTGCAGCCTGGAAGTCTGATTCCAGAGGAACAAAGAGACAAATACCAACGTGGATTCTGGCAGAGGGGAACAATGCAGGTGCCCAGTGAGTAAAACTGGGGCACAAGAGGAAGGTTTAATTACCGGAAAAAGATAGCAGGTACTGAATGTGGGGCAGAAAGTGAGGGAGGATGGGAAACAATTGCCTCTCTTGCTAAGACCCAGCACAGAGTCCTGCACGTGGGAGGAAATCAATAAAGATTGGCTGTTTCGTTAATTAACTCAGCAGCTTATTTAGCTCAGCCAGGTCTGTTGAGTCTTTAAAGAAACTGGATCAGTGTTAAGGCAGGGCTGCAGCCCTCCTGCATCAGAATCACCCGGTGGGGGTGGGGGATTGGGGCTTGTTGAAAATACAGATACCAGGGCTCTGAAAGAGACTTAATCCTAACCTCCTGGGCCTGGGGCCCAGGAATCTGTATACCACTGGGCTACATGGCTGTACCTGTGGGTCGCCTTGTTCTGTTGGAGAAACTTGTTATTGTATTGGGTACTGTTTGCCTTAAATTTCAGGTTAAAATTAATTTTTCCCCCAATTGAGCAAAATAGAGGCAGTGACAGTATTCATATGAATGTATCTGGTGTGATTCGTCCCATTTTTCAGGTGGAGTTTATCTCATTCCCTGTCTCCACACTGGACCGGTTTGCCCAGATCTGTTTTTACCTACAGGGCCAGCTGCAGGGCTGGGCAGTCCCAGTTTCTGGTGCAATCCCAATGGCAGGAATCTCGGCCCTACCCTCTACCCACTGTGCTGATAATTAGGTCATCCTTTCCAGACTTGACATCCCAGGCCCAACCATCCCTGCTCCTAATTGTTCCCTGAAGGTGCCCCAGAGCTGGAGTACCACGGTGAGCCCTGGGGGTCCACAATACCTCTAGATCCCAGCATCTCACCTGCCCCCACCATACTGACCTAACACACAGGAGTGGGTGACTGCCTTCACTTCCCTCATTCGAGTCTTTCCCTAATTCAGAAACAAACATGTACTGAGCACCCACTGTATATGTGCCAGGCACTGGGTTACCAAAGTGAGAGAGGATTTGAATTCCTGGGGGTCTCCATTTCTCCACAAGAGTATTGGTTTGGTTTGGTTTGGTTTTTCCATTTTGATGGTAATCTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCGTTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCATGCACCCACCACCACACCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGATCTCGATCTCCTGACCTCGTGATCCACCTGCCTCGCCCTCCCTGAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCAGCCTGATGGTAATCTTTTTTAAAAAAAAAATTGATATTCTGCCATATAATTTTTTTTTAATTTTTGAGATGGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAATAATTCTCCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACACGTGCCCACCACCACACCTGGCTAATTTTTTATATTTTTAGTAGAGATGGGATTTCACCATGTTGGCCAAGCCTGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCATTAACCACCACACCCAGCCTCTGCCATATAATTTACAGTCTGTATTTATATTCATAAACATTCTCTTCAAGTGAAGGCCAAATGATATCATGTGGTGATGAACCATGAATAATCCAAAATGATTTAAATAAAGTGCCCAACATTTTGTTATCCAAGCTCAAAGGAAACTTGTAGCAATCAAAGCAACATTCTCGTGTTCATGGACCCCATTTTGTACCTACCATCTTCTAAAAGTTTGTTATGAATATGGCAGTGAATGAACAATGAAAAATCTTTCTGTTCCTCATTCTAGCAATTATGCAATTAGACACTTCTTAAAGGCAGATTTCCAGCATGTGGCAATGCTAACTTTACTTTTGAGTGAACAAGACAGTTCCTCAGAGTGAGCAAGTGGCCTTTCATTAAAATCGGCATTTCAGGAATGCTCAGGGGCAGAGTTTTAATTAACTATGAGGTCGGATTATTCTGAGCTAGCATACAAGGCAAAGCTAACAGGTATTCTCTGCATTAGCACTGAACCCAAAGGCCAAAGACAATAACTATACCATTAGTTTCAGGACAAGAGCATCATCTGTCATATTAAACTAATGTTGTTTTACTTATAAAATACTGGTTTTGCAGTGGTGTTTGGGCTTCATTCATACATCAGCTTTGTTTTTATAATAATAGCTAGTACTAATTAGTGCTTGCCACATGCCAGGCACTGTGCTAAACCTTTTTCATGGATTGACTCTTTAATCCTCAAAACAATCCTATGAGATAGATACTATTTCCTGCGTCTTACCAGTCAGTAAACTGAGGCACAGAGAAATTAACTTACCTGAGGTTACACACCATGTAAGTGACAGGTCTAGGATTTAAACCCAAGTGGGTCTTGCTCCAGAAATTGTGTTCTTAATGCAACACTATACTGTTTATCATTATATCATTTTATATATATATGATTATATATCACTTTATATATTAAATGATTTCATGATTTCATTTTATATTTTTTACATATTTTTTTACATATTTGAATAGTTATAAAAACTGCTTAATCCAATATTTAGCTTGTAAAAATTTCTTTTCTGATTTAAGAAAAAGAAAGGTCTATGTACTATTCAAGTGAAAGAAATGCTGTTTTAGTAGAATTTCTGCTCAGAGTAACTGGGACCTGTTCTTTGTTTTGATGTTGTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTGTTTGTTTGTTTTTGAGACAGGGTCTCGCTCTTGTTGCCCAGGCTGGAATGCAGTGGTGCAATCACCGCTCACTGCAGCTTTGATCTCAAGCAGTCCTTCCCACCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCGCACCACCAAGCCCTGCTAATTTTTGTATTTTTTGTAGAAATGGGGTTTCGCCATGGTGGCCAGGCTGGTCTCAAACTCCTGGTCTCAAGCAATCCACCCACCTTGGCATCCCAAATTGCTGGGATTTCAGGCATAAACCACCATGCCCGGCTGGGACCCATTCTAAATCCCAGTGGTGACATGAAGTAGGAAGTGGCTCCAATGCCTGGCTTAGCTCTGTAAGCCTTTCTGATCCTCTCCTCACAGCCCAGCATGCCCTCCTCACTAGGGAAGGCCTACTGGGTAAGAACTGAGACTCCTGAACTCATCTCCACTTGTCAAGCCCCTGAGCATTCCCAATGCCTAGTTTTCCTGTGAAGTGTTCTGCTGTTAGGTCAGCTCTCCTGCTAGGAATGCAAGCTGGAGTTGCAGCTGACATTGCCATCTTTGAACCCAAAGTATTCCTCATCCTACCCCACTCCGACCTCCAGCCTTCTGCAGGGCAGGTGAGTTTCCCAACTCTCTGTCACAGCTGACACCTGACTGTGAGGTCCCAATCAGCACCAGCTTCCTCATCCTCCTTCTTTCCCTTCTCCCTGCCAGACTCATGTTCAGATGCTTCTCCTTTGGCTCAGTGACAGCCTCAACAGCATATGTGATCACAGTGACAACTGCCTGGTGCCAACTCCAGTTCACCAGGCCAGTATGACAAAAGTGAATCACACTGTTATAACTGCATCAAAATGAGGCAGTAACTCCTTGAAAGAGTGTCAGTAAGATGCAGGTAATAAATGCTTCTAGTCTGCTGGAAGGCCCATGAATTGCAATCCTCCCTCTTTATAATCACAAAAGATATGATGCATAATTACAAGTTAATGGAACTGACTTTTGCATGTGACTTGGGAATTATAAAATTATAAAGCTGAGAGGGTCCTCAGAGTTAGATCACTCCCTGCAAGTTGCATCACTTGTTTACAAATGCTTTTTTGTAGCACAATGGTAAAAAGCACTTTTACCATTGTTTCAGCACTAACAAATGAGCCCCCATAATCTTCATGCTTTTGGGAAGAGTACTGTCCACTGTCCAGTCTCCAACTTC	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_4841:HG2_PB_assemblyticsfalcon_24577:HG3_PB_pbsv_7776:HG2_10X_allpass_1338:HG4_PB_pbsv_8017:HG4_10X_allpass_1559:HG3_10X_allpass_1613:HG4_Ill_SVrefine2DISCOVARDovetail_5812:HG2_PB_pbsv_7992:HG2_PB_SVrefine2PBcRplusDovetail_10152:HG2_PB_SVrefine2Falcon2Bionano_3936:HG2_Ill_SVrefine2DISCOVARplusDovetail_11928:HG2_10X_SVrefine210Xhap12_5703:HG4_PB_SVrefine2Falcon1Dovetail_4897:HG2_PB_SVrefine2PB10Xhap12_5801:HG2_PB_HySA_14604:HG2_Ill_MetaSV_4635:HG2_PB_SVrefine2Falcon1plusDovetail_10954:HG4_PB_SVrefine2PBcRDovetail_3952:HG3_PB_SVrefine2PBcRDovetail_3670:HG3_PB_SVrefine2Falcon1Dovetail_4825:HG3_Ill_MetaSV_4809;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5703:HG2_Ill_SVrefine2DISCOVARplusDovetail_11928:HG2_PB_SVrefine2Falcon2Bionano_3936:HG2_PB_SVrefine2PBcRplusDovetail_10152:HG2_PB_pbsv_7992:HG4_Ill_SVrefine2DISCOVARDovetail_5812;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0895664;ClusterMaxSizeDiff=0.0895664;ClusterMaxEditDist=0.0895664;PBcalls=13;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-8495;DistBack=86508;DistForward=-8480;DistMin=-8480;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=305;REFWIDENED=7:26136993-26145792;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9999;PctRecOverlap=0.9999;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3660.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:53:0|1:39:0:1:37:./.:0:0:0:0:./.:20:2:0/1:432:183:8352:.:.
chr7	27514335	HG4_Ill_GATKHCSBGrefine_5598	TAAAAAATTACATATTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAATGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_12146:HG2_PB_HySA_14617:HG4_Ill_Krunchall_11613:HG3_Ill_Krunchall_10995:HG2_Ill_Krunchall_11277:HG2_PB_assemblyticsPBcR_23808:HG4_PB_assemblyticsfalcon_24033:HG2_PB_assemblyticsfalcon_24590:HG4_PB_HySA_11777:HG3_Ill_MetaSV_4812:HG2_Ill_tnscope_919:HG2_Ill_MetaSV_4638:HG4_PB_SVrefine2PBcRDovetail_3958:HG4_PB_SVrefine2Falcon1Dovetail_4902:HG4_Ill_scalpel_7597:HG4_Ill_manta_1970:HG4_Ill_SVrefine2DISCOVARDovetail_5821:HG4_Ill_MetaSV_4844:HG4_Ill_GATKHCSBGrefine_5598:HG4_10X_allpass_1560:HG3_PB_SVrefine2Falcon1Dovetail_4830:HG3_Ill_scalpel_7858:HG3_Ill_SVrefine2DISCOVARDovetail_6033:HG3_Ill_GATKHCSBGrefine_5431:HG3_10X_allpass_1614:HG2_PB_SVrefine2PBcRplusDovetail_10157:HG2_PB_SVrefine2PB10Xhap12_5808:HG2_PB_SVrefine2Falcon2Bionano_3942:HG2_PB_SVrefine2Falcon1plusDovetail_10959:HG2_Ill_scalpel_7742:HG2_Ill_manta_2296:HG2_Ill_SVrefine2DISCOVARplusDovetail_11935:HG2_Ill_GATKHCSBGrefine_5506:HG2_10X_SVrefine210Xhap12_5708:HG4_PB_pbsv_8024:HG3_PB_pbsv_7783:HG2_PB_pbsv_8000:HG2_Ill_breakscan11_1163;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5708:HG2_Ill_GATKHCSBGrefine_5506:HG2_Ill_SVrefine2DISCOVARplusDovetail_11935:HG2_Ill_manta_2296:HG2_Ill_scalpel_7742:HG2_PB_SVrefine2Falcon1plusDovetail_10959:HG2_PB_SVrefine2Falcon2Bionano_3942:HG2_PB_SVrefine2PB10Xhap12_5808:HG2_PB_SVrefine2PBcRplusDovetail_10157:HG3_10X_allpass_1614:HG3_Ill_GATKHCSBGrefine_5431:HG3_Ill_SVrefine2DISCOVARDovetail_6033:HG3_Ill_scalpel_7858:HG3_PB_SVrefine2Falcon1Dovetail_4830:HG4_10X_allpass_1560:HG4_Ill_GATKHCSBGrefine_5598:HG4_Ill_MetaSV_4844:HG4_Ill_SVrefine2DISCOVARDovetail_5821:HG4_Ill_manta_1970:HG4_Ill_scalpel_7597:HG4_PB_SVrefine2Falcon1Dovetail_4902:HG4_PB_SVrefine2PBcRDovetail_3958;NumExactMatchSVs=22;ClusterMaxShiftDist=0.121101;ClusterMaxSizeDiff=0.121101;ClusterMaxEditDist=0.121101;PBcalls=16;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-275;DistBack=1850;DistForward=-260;DistMin=-260;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:27514336-27514624;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3662.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:./.:2:34:0:0:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr7	28214300	HG2_10X_allpass_1341	AACAGTGATGTTTTATAAAGGATGATCTGACTGTTTACAGGTGAGAAGAGGCTAATGGAAAAACCAGTGAAAACAGAGTTTTGGAGACTGCCGTAAAGTTTCAGATTTCGGGTTCCCTGATCCTGCCTATGGGGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGCACATGTATTTAAAACTCCTAGCATTACACCTGGGGGCTTCTCGGGAACCCTGGGAGTAACAGGGAGATCTTGCCGCCAAGCCACAGGGCACAGGCAGAGAGCAGGGCAGGCAGCAACAAGCCTTTCATTCATTCATTTATTAATTCAGTCATTCCTTCTCCCCACAGGAAGTGTCCTCAATGGAATGCACCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4640:HG2_PB_assemblyticsfalcon_24597:HG4_PB_assemblyticsfalcon_24040:HG4_PB_SVrefine2Falcon1Dovetail_4905:HG3_PB_assemblyticsfalcon_24446:HG3_PB_SVrefine2Falcon1Dovetail_4834:HG4_Ill_Krunchall_11621:HG4_PB_pbsv_8027:HG2_PB_pbsv_8004:HG4_Ill_manta_1971:HG4_Ill_GATKHCSBGrefine_5602:HG4_10X_allpass_1562:HG2_PB_SVrefine2PB10Xhap12_5812:HG2_PB_SVrefine2Falcon1plusDovetail_10962:HG2_Ill_manta_2297:HG2_Ill_breakscan11_1164:HG2_Ill_SpiralSDKrefine_15669:HG2_Ill_GATKHCSBGrefine_5510:HG2_10X_allpass_1341:HG2_10X_SVrefine210Xhap12_5711:HG4_Ill_MetaSV_4846:HG2_Ill_tnscope_921;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5711:HG2_10X_allpass_1341:HG2_Ill_GATKHCSBGrefine_5510:HG2_Ill_SpiralSDKrefine_15669:HG2_Ill_breakscan11_1164:HG2_Ill_manta_2297:HG2_PB_SVrefine2Falcon1plusDovetail_10962:HG2_PB_SVrefine2PB10Xhap12_5812:HG4_10X_allpass_1562:HG4_Ill_GATKHCSBGrefine_5602:HG4_Ill_manta_1971;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0192572;ClusterMaxSizeDiff=0.0192572;ClusterMaxEditDist=0.0192572;PBcalls=9;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-364;DistBack=-239;DistForward=-339;DistMin=-339;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=7:28214301-28214668;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:25:./.:8:22:14:0:./.:0:0:0:0:0/1:48:18:0/1:20:9:.:.:.
chr7	29476917	HG2_10X_SVrefine210Xhap12_5714	TAAGATATCTAAAACCGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5714:HG2_PB_HySA_14633:HG3_PB_pbsv_7791:HG3_PB_HySA_12165:HG2_PB_pbsv_8009:HG4_Ill_Krunchall_11631:HG3_Ill_Krunchall_11011:HG2_Ill_Krunchall_11293:HG2_PB_assemblyticsPBcR_23826:HG4_PB_HySA_11795:HG2_Ill_Spiral_573:HG4_PB_pbsv_8031:HG4_Ill_MetaSV_4849:HG3_Ill_MetaSV_4814:HG2_Ill_tnscope_922:HG2_Ill_MetaSV_4641:HG4_PB_SVrefine2PBcRDovetail_3964:HG4_PB_SVrefine2Falcon1Dovetail_4907:HG4_Ill_SVrefine2DISCOVARDovetail_5830:HG4_Ill_GATKHCSBGrefine_5607:HG4_10X_allpass_1564:HG3_PB_SVrefine2Falcon1Dovetail_4839:HG3_Ill_manta_1880:HG3_Ill_GATKHCSBGrefine_5436:HG3_10X_allpass_1616:HG2_PB_SVrefine2PBcRplusDovetail_10162:HG2_PB_SVrefine2PB10Xhap12_5816:HG2_PB_SVrefine2Falcon1plusDovetail_10964:HG2_Ill_manta_2299:HG2_Ill_breakscan11_1166:HG2_Ill_SVrefine2DISCOVARplusDovetail_11940:HG2_Ill_GATKHCSBGrefine_5514:HG2_10X_allpass_1342;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5714:HG4_PB_SVrefine2PBcRDovetail_3964:HG4_PB_SVrefine2Falcon1Dovetail_4907:HG4_Ill_SVrefine2DISCOVARDovetail_5830:HG4_Ill_GATKHCSBGrefine_5607:HG4_10X_allpass_1564:HG3_PB_SVrefine2Falcon1Dovetail_4839:HG3_Ill_manta_1880:HG3_Ill_GATKHCSBGrefine_5436:HG3_10X_allpass_1616:HG2_PB_SVrefine2PBcRplusDovetail_10162:HG2_PB_SVrefine2PB10Xhap12_5816:HG2_PB_SVrefine2Falcon1plusDovetail_10964:HG2_Ill_manta_2299:HG2_Ill_breakscan11_1166:HG2_Ill_SVrefine2DISCOVARplusDovetail_11940:HG2_Ill_GATKHCSBGrefine_5514:HG2_10X_allpass_1342;NumExactMatchSVs=18;ClusterMaxShiftDist=0.122977;ClusterMaxSizeDiff=0.122977;ClusterMaxEditDist=0.122977;PBcalls=13;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-522;DistForward=-296;DistMin=-522;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:29476918-29477242;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3664.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:0|1:34:2:1:25:./.:0:0:0:0:0/1:23:26:0/1:24:6:.:.:.
chr7	30024550	HG4_Ill_SVrefine2DISCOVARDovetail_5832	GAATTACAAATTAAAATAAGGAGCCAATTAAATATATAAGGTGAACAAAGATTTAAAAATTTGATAATATCTAGTCTTGACTTGTGTGGGGAAAGTAGCTTTGGGTAATTTGGCCAAATCTAACAGATTAACATAACCAGTGAAGTTGGTAGACAGCTCTTGTTCATCTCATCCTAAAAGGAAGGAGACTGGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTGGGAGACTGAGGCAGGCGGATCATGAGGTCAGGAGTTTGAGACGAGCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAAAATACAAAAATTAGCCAGGCATGGTGGTGCGCACCTGTAATCCCAGCTACTCAGGAGACTAAAGCAGGAGAAATCACTTGAACCTGGGGGGACAGAGGTTGCAGTGAGCTGAGATCACGCCACTACACTCCAGCCTGGGTGACAGAGTGAGACTCTGTCTCAAA	AAAAATAAATAAAT	20	PASS	ClusterIDs=HG3_Ill_Krunchall_11020:HG4_PB_HySA_11801:HG3_PB_pbsv_7792:HG2_PB_assemblyticsfalcon_24617:HG2_PB_SVrefine2Falcon1plusDovetail_10966:HG4_PB_SVrefine2PBcRDovetail_3965:HG4_Ill_SVrefine2DISCOVARDovetail_5832:HG2_PB_SVrefine2Falcon2Bionano_3948:HG4_PB_assemblyticsfalcon_24053:HG4_PB_SVrefine2Falcon1Dovetail_4909:HG2_PB_pbsv_8011:HG3_PB_assemblyticsfalcon_24462:HG3_PB_SVrefine2Falcon1Dovetail_4841:HG3_Ill_SVrefine2DISCOVARDovetail_6039:HG2_Ill_MetaSV_4643:HG3_Ill_MetaSV_4816:HG4_PB_pbsv_8033:HG2_10X_allpass_1343;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3948:HG4_Ill_SVrefine2DISCOVARDovetail_5832:HG4_PB_SVrefine2PBcRDovetail_3965;NumExactMatchSVs=3;ClusterMaxShiftDist=0.172021;ClusterMaxSizeDiff=0.172021;ClusterMaxEditDist=0.235162;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-462;DistBack=73351;DistForward=-456;DistMin=-456;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=7:30024550-30025025;PctSeqSimilarity=0.9609;PctSizeSimilarity=1;PctRecOverlap=0.9727;SizeDiff=0;StartDistance=-10;EndDistance=3;GTMatch=0;TruScore=97;MatchId=3666.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:29:0|1:32:0:0:23:./.:0:0:0:0:0/1:47:7:0/1:46:10:.:.:.
chr7	30609824	HG3_Ill_250bpfermikitraw_10703	CGCTCTGTGTCTAGCTAAAGGATTGTAAATGCACCAAGCAGCACTCTATAACAATGCACCAATCAGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5715:HG4_PB_pbsv_8034:HG3_PB_pbsv_7794:HG2_PB_pbsv_8012:HG4_Ill_250bpfermikitraw_11035:HG3_Ill_250bpfermikitraw_10703:HG3_Ill_150bpfermikitraw_10421:HG3_10X_allpass_1617:HG2_Ill_SpiralSDKrefine_15685:HG2_Ill_250bpfermikitraw_11031:HG4_PB_SVrefine2PBcRDovetail_3966:HG3_PB_SVrefine2Falcon1Dovetail_4843:HG3_Ill_SVrefine2DISCOVARDovetail_6041;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11031:HG2_Ill_SpiralSDKrefine_15685:HG3_10X_allpass_1617:HG3_Ill_150bpfermikitraw_10421:HG3_Ill_250bpfermikitraw_10703:HG4_Ill_250bpfermikitraw_11035;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0305344;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.166667;PBcalls=5;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-66;DistBack=-104;DistForward=129427;DistMin=-104;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=324;REFWIDENED=7:30609743-30610132;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3667.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:32:0|1:28:1:2:30:./.:0:0:0:0:0/1:23:13:./.:.:.:.:.:.
chr7	31523765	HG2_PB_SVrefine2PB10Xhap12_5820	TGCACACACATGTTTTTTTTTTTTTTTTTTTTGCTCTCCTATTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCCATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGTATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAAATGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5720:HG3_10X_allpass_1619:HG3_Ill_MetaSV_4818:HG2_Ill_MetaSV_4644:HG2_PB_assemblyticsPBcR_23843:HG2_10X_allpass_1344:HG3_Ill_Krunchall_11034:HG2_Ill_Krunchall_11315:HG2_PB_pbsv_8016:HG3_PB_HySA_12184:HG3_PB_pbsv_7799:HG2_Ill_tnscope_923:HG3_PB_SVrefine2Falcon1Dovetail_4846:HG2_PB_SVrefine2PBcRplusDovetail_10166:HG2_PB_SVrefine2PB10Xhap12_5820:HG2_PB_SVrefine2Falcon2Bionano_3950:HG2_PB_SVrefine2Falcon1plusDovetail_10967;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5720:HG3_PB_SVrefine2Falcon1Dovetail_4846:HG2_PB_SVrefine2PBcRplusDovetail_10166:HG2_PB_SVrefine2PB10Xhap12_5820:HG2_PB_SVrefine2Falcon2Bionano_3950:HG2_PB_SVrefine2Falcon1plusDovetail_10967;NumExactMatchSVs=6;ClusterMaxShiftDist=0.03215;ClusterMaxSizeDiff=0.03215;ClusterMaxEditDist=0.03215;PBcalls=9;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-1488;DistBack=33759;DistForward=-1477;DistMin=-1477;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:31523766-31525267;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3668.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:35:0|1:39:0:2:34:./.:0:0:0:0:0/1:28:23:0/1:109:37:1448:.:.
chr7	32390151	HG2_Ill_breakscan11_1168	ATTTGACTAATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGTGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGTCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATATGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5723:HG4_PB_pbsv_8042:HG4_PB_assemblyticsfalcon_24076:HG3_PB_assemblyticsfalcon_24485:HG2_PB_assemblyticsfalcon_24634:HG2_PB_assemblyticsPBcR_23850:HG4_Ill_MetaSV_4853:HG3_Ill_Krunchall_11048:HG2_Ill_Krunchall_11325:HG4_10X_allpass_1566:HG2_10X_allpass_1345:HG3_10X_allpass_1620:HG3_PB_pbsv_7805:HG2_Ill_tnscope_926:HG4_PB_SVrefine2PBcRDovetail_3970:HG4_Ill_SVrefine2DISCOVARDovetail_5843:HG4_Ill_GATKHCSBGrefine_5614:HG3_PB_SVrefine2PBcRDovetail_3683:HG3_PB_SVrefine2Falcon1Dovetail_4851:HG3_Ill_SVrefine2DISCOVARDovetail_6050:HG3_Ill_MetaSV_4822:HG3_Ill_GATKHCSBGrefine_5446:HG2_PB_pbsv_8023:HG2_PB_SVrefine2PBcRplusDovetail_10170:HG2_PB_SVrefine2PB10Xhap12_5826:HG2_PB_SVrefine2Falcon2Bionano_3954:HG2_PB_SVrefine2Falcon1plusDovetail_10971:HG2_Ill_breakscan11_1168:HG2_Ill_SVrefine2DISCOVARplusDovetail_11950:HG2_Ill_MetaSV_4647:HG2_Ill_GATKHCSBGrefine_5522;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5723:HG4_PB_SVrefine2PBcRDovetail_3970:HG4_Ill_SVrefine2DISCOVARDovetail_5843:HG4_Ill_GATKHCSBGrefine_5614:HG3_PB_SVrefine2PBcRDovetail_3683:HG3_PB_SVrefine2Falcon1Dovetail_4851:HG3_Ill_SVrefine2DISCOVARDovetail_6050:HG3_Ill_MetaSV_4822:HG3_Ill_GATKHCSBGrefine_5446:HG2_PB_pbsv_8023:HG2_PB_SVrefine2PBcRplusDovetail_10170:HG2_PB_SVrefine2PB10Xhap12_5826:HG2_PB_SVrefine2Falcon2Bionano_3954:HG2_PB_SVrefine2Falcon1plusDovetail_10971:HG2_Ill_breakscan11_1168:HG2_Ill_SVrefine2DISCOVARplusDovetail_11950:HG2_Ill_MetaSV_4647:HG2_Ill_GATKHCSBGrefine_5522;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0215235;ClusterMaxSizeDiff=0.0215235;ClusterMaxEditDist=0.0215235;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2961;DistBack=68053;DistForward=-2943;DistMin=-2943;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:32390152-32393126;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:108:1/1:0:20:0:5:./.:0:0:0:0:1/1:0:13:1/1:3:209:2980:.:.
chr7	32640201	HG2_Ill_GATKHC_13195	CAACCCCATCAAAAAGGGCAAAGAATATGAACAGCCACTCCTCTAAAGAAGACATCT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_8031:HG4_PB_HySA_11827:HG4_PB_assemblyticsfalcon_24084:HG4_PB_pbsv_8047:HG4_Ill_svaba_10363:HG4_Ill_scalpel_7639:HG4_Ill_Krunchall_11672:HG4_Ill_GATKHC_13268:HG4_Ill_GATKHCSBGrefine_5620:HG4_CG_vcfBeta_5275:HG4_10X_allpass_1568:HG2_Ill_svaba_10228:HG2_Ill_Krunchall_11335:HG2_Ill_GATKHC_13195:HG2_Ill_GATKHCSBGrefine_5530:HG2_10X_allpass_1347;NumClusterSVs=16;ExactMatchIDs=HG2_10X_allpass_1347:HG2_Ill_GATKHCSBGrefine_5530:HG2_Ill_GATKHC_13195:HG2_Ill_Krunchall_11335:HG2_Ill_svaba_10228:HG4_10X_allpass_1568:HG4_CG_vcfBeta_5275:HG4_Ill_GATKHCSBGrefine_5620:HG4_Ill_GATKHC_13268:HG4_Ill_Krunchall_11672:HG4_Ill_scalpel_7639:HG4_Ill_svaba_10363:HG4_PB_pbsv_8047;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0530973;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.125;PBcalls=4;Illcalls=9;TenXcalls=2;CGcalls=1;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=1;HG2count=6;HG3count=0;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-56;DistBack=20965;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:32640200-32640259;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3670.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:22:0|1:36:6:2:14:./.:0:0:0:0:0/1:25:7:./.:.:.:.:.:.
chr7	33403531	HG2_10X_SVrefine210Xhap12_5731	TTTCACTATATTTTTATTTTTTTTTTTATTTTTTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4649:HG2_10X_allpass_1349:HG3_PB_assemblyticsfalcon_24503:HG2_Ill_Krunchall_11343:HG2_PB_assemblyticsfalcon_24651:HG2_PB_SVrefine2Falcon1plusDovetail_10979:HG2_PB_pbsv_8036:HG2_PB_HySA_14683:HG4_PB_pbsv_8050:HG4_Ill_manta_1980:HG4_Ill_GATKHCSBGrefine_5624:HG4_10X_allpass_1570:HG3_PB_SVrefine2Falcon1Dovetail_4858:HG2_PB_SVrefine2PB10Xhap12_5836:HG2_PB_SVrefine2Falcon2Bionano_3959:HG2_Ill_manta_2307:HG2_Ill_SVrefine2DISCOVARplusDovetail_11958:HG2_Ill_GATKHCSBGrefine_5534:HG2_10X_SVrefine210Xhap12_5731:HG4_Ill_Spiral_658:HG2_Ill_Spiral_574;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5731:HG2_Ill_GATKHCSBGrefine_5534:HG2_Ill_SVrefine2DISCOVARplusDovetail_11958:HG2_Ill_manta_2307:HG2_PB_SVrefine2Falcon2Bionano_3959:HG2_PB_SVrefine2PB10Xhap12_5836:HG3_PB_SVrefine2Falcon1Dovetail_4858:HG4_10X_allpass_1570:HG4_Ill_GATKHCSBGrefine_5624:HG4_Ill_manta_1980:HG4_PB_pbsv_8050;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0776398;ClusterMaxSizeDiff=0.0776398;ClusterMaxEditDist=0.0776398;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-330;DistForward=103318;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:33403532-33403874;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3671.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:50:47:0|1:50:1:1:41:./.:0:0:0:0:0/1:44:25:./.:22:2:.:.:.
chr7	33708273	HG2_Ill_scalpel_7789	CGGTGGCTTATGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGCGAGCGGATCACCTGAGGTCAAGAGTTTAAGACCAGCCCAGCTAACATGGCGAAACCCCATCACTACTAAAAATACAAAAATTAACTGGTGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5732:HG4_PB_assemblyticsfalcon_24097:HG2_PB_pbsv_8038:HG4_PB_pbsv_8051:HG2_Ill_Krunchall_11344:HG4_Ill_svaba_10368:HG4_Ill_scalpel_7644:HG4_Ill_MetaSV_4858:HG4_10X_allpass_1571:HG2_Ill_svaba_10234:HG2_Ill_scalpel_7789:HG2_Ill_SpiralSDKrefine_15709:HG2_Ill_MetaSV_4651:HG2_Ill_GATKHCSBGrefine_5535:HG2_10X_allpass_1350:HG4_Ill_SVrefine2DISCOVARDovetail_5848:HG3_PB_SVrefine2Falcon1Dovetail_4859:HG2_PB_SVrefine2PB10Xhap12_5837:HG2_PB_SVrefine2Falcon1plusDovetail_10980:HG2_Ill_SVrefine2DISCOVARplusDovetail_11959;NumClusterSVs=20;ExactMatchIDs=HG2_10X_allpass_1350:HG2_Ill_GATKHCSBGrefine_5535:HG2_Ill_MetaSV_4651:HG2_Ill_SpiralSDKrefine_15709:HG2_Ill_scalpel_7789:HG2_Ill_svaba_10234:HG4_10X_allpass_1571:HG4_Ill_MetaSV_4858:HG4_Ill_scalpel_7644:HG4_Ill_svaba_10368;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0148699;ClusterMaxSizeDiff=0.00743494;ClusterMaxEditDist=0.0446097;PBcalls=6;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-134;DistBack=102851;DistForward=-99;DistMin=-99;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=42;REFWIDENED=7:33708269-33708444;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3672.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:39:./.:27:9:3:23:./.:0:0:0:0:0/1:30:25:./.:.:.:.:.:.
chr7	33712013	HG3_Ill_GATKHC_13161	TCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCCTTCCTTCCTTCCTTCCTTCTTCCCTTCCTC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_8052:HG2_Ill_Krunchall_11346:HG2_PB_pbsv_8039:HG4_Ill_svaba_10369:HG4_Ill_scalpel_7645:HG4_Ill_manta_1981:HG4_Ill_Krunchall_11679:HG4_Ill_GATKHC_13274:HG4_Ill_GATKHCSBGrefine_5625:HG4_Ill_250bpfermikitraw_11063:HG4_Ill_150bpfermikitraw_10618:HG4_10X_allpass_1572:HG3_Ill_svaba_10324:HG3_Ill_scalpel_7901:HG3_Ill_Krunchall_11062:HG3_Ill_GATKHC_13161:HG3_Ill_GATKHCSBGrefine_5453:HG3_Ill_250bpfermikitraw_10738:HG3_Ill_150bpfermikitraw_10457:HG3_10X_allpass_1623:HG2_Ill_svaba_10235:HG2_Ill_scalpel_7790:HG2_Ill_manta_2308:HG2_Ill_SpiralSDKrefine_15710:HG2_Ill_Krunchall_11345:HG2_Ill_GATKHC_13201:HG2_Ill_GATKHCSBGrefine_5536:HG2_Ill_250bpfermikitraw_11060:HG2_Ill_150bpfermikitraw_10406:HG3_PB_pbsv_7814:HG3_Ill_SVrefine2DISCOVARDovetail_6063:HG2_PB_SVrefine2Falcon1plusDovetail_10981;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10406:HG2_Ill_250bpfermikitraw_11060:HG2_Ill_GATKHCSBGrefine_5536:HG2_Ill_GATKHC_13201:HG2_Ill_Krunchall_11345:HG2_Ill_SpiralSDKrefine_15710:HG2_Ill_manta_2308:HG2_Ill_scalpel_7790:HG2_Ill_svaba_10235:HG3_10X_allpass_1623:HG3_Ill_150bpfermikitraw_10457:HG3_Ill_250bpfermikitraw_10738:HG3_Ill_GATKHCSBGrefine_5453:HG3_Ill_GATKHC_13161:HG3_Ill_Krunchall_11062:HG3_Ill_scalpel_7901:HG3_Ill_svaba_10324:HG4_10X_allpass_1572:HG4_Ill_150bpfermikitraw_10618:HG4_Ill_250bpfermikitraw_11063:HG4_Ill_GATKHCSBGrefine_5625:HG4_Ill_GATKHC_13274:HG4_Ill_Krunchall_11679:HG4_Ill_manta_1981:HG4_Ill_scalpel_7645:HG4_Ill_svaba_10369;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.218487;PBcalls=4;Illcalls=26;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-61;DistBack=-17;DistForward=-49;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=59;REFWIDENED=7:33711981-33712100;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:23:0|1:17:2:4:23:./.:0:0:0:0:0/1:28:27:./.:.:.:.:.:.
chr7	33898841	HG3_Ill_manta_1886	TTGAGCCTGGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_928:HG4_Ill_Krunchall_11683:HG2_Ill_Krunchall_11351:HG4_PB_assemblyticsfalcon_24102:HG3_PB_assemblyticsfalcon_24511:HG2_PB_assemblyticsfalcon_24655:HG2_PB_assemblyticsPBcR_23872:HG2_Ill_breakscan11_1169:HG4_PB_pbsv_8054:HG2_PB_HySA_14688:HG3_PB_HySA_12218:HG4_PB_HySA_11844:HG4_Ill_scalpel_7649:HG4_Ill_manta_1982:HG4_Ill_SVrefine2DISCOVARDovetail_5850:HG4_Ill_GATKHCSBGrefine_5627:HG4_10X_allpass_1573:HG3_PB_pbsv_7816:HG3_PB_SVrefine2PBcRDovetail_3690:HG3_PB_SVrefine2Falcon1Dovetail_4861:HG3_Ill_scalpel_7904:HG3_Ill_manta_1886:HG3_Ill_SVrefine2DISCOVARDovetail_6065:HG3_Ill_GATKHCSBGrefine_5455:HG3_10X_allpass_1624:HG2_PB_pbsv_8041:HG2_PB_SVrefine2PB10Xhap12_5839:HG2_PB_SVrefine2Falcon2Bionano_3961:HG2_PB_SVrefine2Falcon1plusDovetail_10983:HG2_Ill_scalpel_7793:HG2_Ill_manta_2309:HG2_Ill_SVrefine2DISCOVARplusDovetail_11962:HG2_Ill_GATKHCSBGrefine_5538:HG2_10X_allpass_1351:HG2_10X_SVrefine210Xhap12_5735:HG4_Ill_MetaSV_4860:HG3_Ill_MetaSV_4826;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5735:HG2_10X_allpass_1351:HG2_Ill_GATKHCSBGrefine_5538:HG2_Ill_SVrefine2DISCOVARplusDovetail_11962:HG2_Ill_manta_2309:HG2_Ill_scalpel_7793:HG2_PB_SVrefine2Falcon1plusDovetail_10983:HG2_PB_SVrefine2Falcon2Bionano_3961:HG2_PB_SVrefine2PB10Xhap12_5839:HG2_PB_pbsv_8041:HG3_10X_allpass_1624:HG3_Ill_GATKHCSBGrefine_5455:HG3_Ill_SVrefine2DISCOVARDovetail_6065:HG3_Ill_manta_1886:HG3_Ill_scalpel_7904:HG3_PB_SVrefine2Falcon1Dovetail_4861:HG3_PB_SVrefine2PBcRDovetail_3690:HG3_PB_pbsv_7816:HG4_10X_allpass_1573:HG4_Ill_GATKHCSBGrefine_5627:HG4_Ill_SVrefine2DISCOVARDovetail_5850:HG4_Ill_manta_1982:HG4_Ill_scalpel_7649:HG4_PB_HySA_11844;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0892308;ClusterMaxSizeDiff=0.0892308;ClusterMaxEditDist=0.0892308;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-332;DistForward=46887;DistMin=-332;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:33898842-33899187;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3674.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:0:31:0:12:./.:0:0:0:0:1/1:0:48:./.:1:12:.:.:.
chr7	36352672	HG4_Ill_Cortex_3409	AGAGCTTAGGACGAGATATGGAGAGGAGACTGACGGGAGCCACAGGCCAGCTCTTCCAAGGCAGGCTAAGGATGTTGAGGTGGTTC	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_24678:HG2_PB_HySA_14718:HG4_PB_pbsv_8064:HG4_PB_assemblyticsfalcon_24124:HG4_Ill_scalpel_7659:HG4_Ill_manta_1984:HG4_Ill_Krunchall_11703:HG4_Ill_GATKHC_13303:HG4_Ill_GATKHCSBGrefine_5636:HG4_Ill_Cortex_3409:HG4_Ill_250bpfermikitraw_11083:HG4_Ill_150bpfermikitraw_10640:HG4_CG_vcfBeta_5291:HG4_10X_allpass_1576:HG3_PB_pbsv_7825:HG3_PB_assemblyticsfalcon_24530:HG3_PB_HySA_12238:HG3_Ill_scalpel_7915:HG3_Ill_Krunchall_11085:HG3_Ill_GATKHC_13187:HG3_Ill_GATKHCSBGrefine_5464:HG3_Ill_Cortex_3426:HG3_Ill_250bpfermikitraw_10764:HG3_Ill_150bpfermikitraw_10483:HG3_CG_vcfBeta_4506:HG3_10X_allpass_1625:HG2_PB_pbsv_8049:HG2_PB_assemblyticsPBcR_23892:HG2_Ill_scalpel_7804:HG2_Ill_manta_2310:HG2_Ill_SpiralSDKrefine_15724:HG2_Ill_Krunchall_11368:HG2_Ill_GATKHC_13229:HG2_Ill_GATKHCSBGrefine_5547:HG2_Ill_Cortex_8289:HG2_Ill_250bpfermikitraw_11084:HG2_CG_vcfBeta_4718:HG2_Ill_breakscan11_1171:HG4_Ill_Spiral_660:HG3_Ill_Spiral_8681:HG2_Ill_Spiral_576;NumClusterSVs=41;ExactMatchIDs=HG2_CG_vcfBeta_4718:HG2_Ill_250bpfermikitraw_11084:HG2_Ill_Cortex_8289:HG2_Ill_GATKHCSBGrefine_5547:HG2_Ill_GATKHC_13229:HG2_Ill_Krunchall_11368:HG2_Ill_SpiralSDKrefine_15724:HG2_Ill_manta_2310:HG2_Ill_scalpel_7804:HG2_PB_assemblyticsPBcR_23892:HG2_PB_pbsv_8049:HG3_10X_allpass_1625:HG3_CG_vcfBeta_4506:HG3_Ill_150bpfermikitraw_10483:HG3_Ill_250bpfermikitraw_10764:HG3_Ill_Cortex_3426:HG3_Ill_GATKHCSBGrefine_5464:HG3_Ill_GATKHC_13187:HG3_Ill_Krunchall_11085:HG3_Ill_scalpel_7915:HG3_PB_HySA_12238:HG3_PB_assemblyticsfalcon_24530:HG3_PB_pbsv_7825:HG4_10X_allpass_1576:HG4_CG_vcfBeta_5291:HG4_Ill_150bpfermikitraw_10640:HG4_Ill_250bpfermikitraw_11083:HG4_Ill_Cortex_3409:HG4_Ill_GATKHCSBGrefine_5636:HG4_Ill_GATKHC_13303:HG4_Ill_Krunchall_11703:HG4_Ill_manta_1984:HG4_Ill_scalpel_7659:HG4_PB_assemblyticsfalcon_24124:HG4_PB_pbsv_8064;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0232558;ClusterMaxSizeDiff=0.0232558;ClusterMaxEditDist=0.0232558;PBcalls=9;Illcalls=27;TenXcalls=2;CGcalls=3;PBexactcalls=7;Illexactcalls=23;TenXexactcalls=2;CGexactcalls=3;HG2count=15;HG3count=13;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-85;DistBack=4005;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:36352671-36352758;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3675.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:1:19:1:20:./.:0:0:0:0:1/1:0:27:./.:.:.:.:.:.
chr7	36440946	HG4_Ill_SVrefine2DISCOVARDovetail_5857	TTTTTTGTTTTTGTTTTTTTGAGACAGAGTCTCACTGTGCTGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAGTTCTCCTGCCTCAGCCTCCCGAGTGGCTGGGATTACAGGCACATGCCATCACACCCAGCTAATTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGTCCAAGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCTGCCGCGGCCTCCCAAAGTGCTGGGATTATAGACGTGAGCCACCTCGGCAGGCCACCTGATGTTTTTTGGCACATAGCATAGTCTATGGTGTCAATTAATACCTATTTATTTTAGCAGTGGTGAGGTAAGAGGTAGGACTCGACTCCAGATGCGGGACTTGGACACTGGACAAGATAGAGAAATAACAACAACAACAAACAAATAAATTAAAAAAAAATTGAGGACTAGCTAAAACAGGGCCTGGGGGAAGCAGCTTTCCAGTGACATGCCCACCAGTGTGCCATGTCAATTCATCATTGCCATGGCAACACCCAGGAGTTACCACCCCTTTCCATGGCAATGACCCAAAAGTTACTATCCCTTCCCTAGATATTTCTACATAAGCTGCCCCTTAATGTGCATGCAATTAAGAGTAGGTATAAATATGATTGTAAAACTGCCCTGAACTGCTACTCTCTGCCTATGGAGTAGCCCTGCTCTGCACAGGGAATCAACAGAGCTGTAACATTGCCTCTTCAATAAAGCTA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5746:HG3_PB_SVrefine2PBcRDovetail_3699:HG4_PB_SVrefine2PBcRDovetail_3977:HG3_PB_pbsv_7826:HG4_PB_pbsv_8065:HG2_PB_pbsv_8050:HG2_10X_allpass_1352:HG2_PB_assemblyticsPBcR_23893:HG2_PB_SVrefine2PBcRplusDovetail_10180:HG4_10X_allpass_1577:HG4_Ill_MetaSV_4866:HG3_Ill_MetaSV_4829:HG2_Ill_MetaSV_4657:HG2_Ill_GATKHCSBGrefine_5548:HG4_Ill_SVrefine2DISCOVARDovetail_5857:HG2_PB_SVrefine2PB10Xhap12_5848:HG2_PB_SVrefine2Falcon1plusDovetail_10990:HG2_Ill_SVrefine2DISCOVARplusDovetail_11974;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5746:HG4_Ill_SVrefine2DISCOVARDovetail_5857:HG2_PB_SVrefine2PB10Xhap12_5848:HG2_PB_SVrefine2Falcon1plusDovetail_10990:HG2_Ill_SVrefine2DISCOVARplusDovetail_11974;NumExactMatchSVs=5;ClusterMaxShiftDist=0.368389;ClusterMaxSizeDiff=0.368389;ClusterMaxEditDist=0.368389;PBcalls=9;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-775;DistBack=57837;DistForward=-552;DistMin=-552;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=290;REFWIDENED=7:36440947-36442011;PctSeqSimilarity=0.9348;PctSizeSimilarity=0.9987;PctRecOverlap=0.7139;SizeDiff=1;StartDistance=-222;EndDistance=-221;GTMatch=0;TruScore=88;MatchId=3676.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:42:1|0:6:38:24:3:./.:0:0:0:0:0/1:73:9:./.:84:9:.:.:.
chr7	36526436	HG3_Ill_150bpfermikitraw_10484	CATATATATATATATTTATATATATATATATTTATATATTTATATATATATATATTTATATATATATATTTATATATATTTATATATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTTATATATATATTTATATATATTT	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_11369:HG2_PB_HySA_14719:HG3_PB_HySA_12239:HG4_PB_HySA_11866:HG3_PB_pbsv_7827:HG2_PB_pbsv_8051:HG4_PB_pbsv_8066:HG4_Ill_svaba_10392:HG4_Ill_GATKHCSBGrefine_5638:HG4_PB_SVrefine2PBcRDovetail_3978:HG3_Ill_MetaSV_4831:HG4_PB_assemblyticsfalcon_24125:HG4_Ill_svaba_10391:HG4_Ill_SVrefine2DISCOVARDovetail_5859:HG4_Ill_MetaSV_4867:HG4_Ill_GATKHCSBGrefine_5637:HG4_10X_allpass_1578:HG3_PB_SVrefine2PBcRDovetail_3700:HG3_PB_SVrefine2Falcon1Dovetail_4866:HG3_Ill_svaba_10344:HG3_Ill_manta_1887:HG3_Ill_SVrefine2DISCOVARDovetail_6077:HG3_Ill_GATKHCSBGrefine_5465:HG3_Ill_250bpfermikitraw_10765:HG3_Ill_150bpfermikitraw_10484:HG3_10X_allpass_1626:HG2_PB_assemblyticsPBcR_23894:HG2_PB_SVrefine2PBcRplusDovetail_10181:HG2_PB_SVrefine2PB10Xhap12_5849:HG2_PB_SVrefine2Falcon1plusDovetail_10991:HG2_Ill_svaba_10255:HG2_Ill_manta_2311:HG2_Ill_SpiralSDKrefine_15725:HG2_Ill_SVrefine2DISCOVARplusDovetail_11975:HG2_Ill_GATKHCSBGrefine_5549:HG2_Ill_250bpfermikitraw_11085:HG2_Ill_150bpfermikitraw_10430:HG2_10X_allpass_1353:HG2_10X_SVrefine210Xhap12_5747:HG3_Ill_MetaSV_4830:HG2_Ill_MetaSV_4658:HG4_Ill_Krunchall_11704;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5747:HG2_10X_allpass_1353:HG2_Ill_150bpfermikitraw_10430:HG2_Ill_250bpfermikitraw_11085:HG2_Ill_GATKHCSBGrefine_5549:HG2_Ill_SVrefine2DISCOVARplusDovetail_11975:HG2_Ill_SpiralSDKrefine_15725:HG2_Ill_manta_2311:HG2_Ill_svaba_10255:HG2_PB_SVrefine2Falcon1plusDovetail_10991:HG2_PB_SVrefine2PB10Xhap12_5849:HG2_PB_SVrefine2PBcRplusDovetail_10181:HG2_PB_assemblyticsPBcR_23894:HG3_10X_allpass_1626:HG3_Ill_150bpfermikitraw_10484:HG3_Ill_250bpfermikitraw_10765:HG3_Ill_GATKHCSBGrefine_5465:HG3_Ill_SVrefine2DISCOVARDovetail_6077:HG3_Ill_manta_1887:HG3_Ill_svaba_10344:HG3_PB_SVrefine2Falcon1Dovetail_4866:HG3_PB_SVrefine2PBcRDovetail_3700:HG4_10X_allpass_1578:HG4_Ill_GATKHCSBGrefine_5637:HG4_Ill_MetaSV_4867:HG4_Ill_SVrefine2DISCOVARDovetail_5859:HG4_Ill_svaba_10391:HG4_PB_assemblyticsfalcon_24125;NumExactMatchSVs=28;ClusterMaxShiftDist=0.168937;ClusterMaxSizeDiff=0.168937;ClusterMaxEditDist=0.168937;PBcalls=14;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-172;DistBack=41665;DistForward=-147;DistMin=-147;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=27;REFWIDENED=7:36526437-36526635;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3677.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:34:1/1:1:12:1:15:./.:0:0:0:0:1/1:0:43:./.:.:.:.:.:.
chr7	36878879	HG2_Ill_scalpel_7807	AACATCTTTGTGGAATTACTCAGTTTTGGTGTCACTAAAGTCGGCCTCCATTCAAGCCCGTCTCCTCATGCTCTAGGTCTTCTGATTTAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5749:HG2_PB_pbsv_8052:HG3_PB_pbsv_7828:HG3_Ill_svaba_10350:HG3_Ill_scalpel_7918:HG3_Ill_manta_1888:HG3_Ill_Krunchall_11090:HG3_Ill_GATKHC_13192:HG3_Ill_GATKHCSBGrefine_5467:HG3_Ill_Cortex_3427:HG3_Ill_250bpfermikitraw_10772:HG3_Ill_150bpfermikitraw_10491:HG3_CG_vcfBeta_4508:HG2_Ill_svaba_10261:HG2_Ill_scalpel_7807:HG2_Ill_manta_2312:HG2_Ill_breakscan11_1172:HG2_Ill_SpiralSDKrefine_15729:HG2_Ill_Krunchall_11374:HG2_Ill_GATKHC_13234:HG2_Ill_GATKHCSBGrefine_5551:HG2_Ill_Cortex_8292:HG2_Ill_250bpfermikitraw_11091:HG2_Ill_150bpfermikitraw_10434:HG2_CG_vcfBeta_4721;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5749:HG3_PB_pbsv_7828:HG3_Ill_svaba_10350:HG3_Ill_scalpel_7918:HG3_Ill_manta_1888:HG3_Ill_Krunchall_11090:HG3_Ill_GATKHC_13192:HG3_Ill_GATKHCSBGrefine_5467:HG3_Ill_Cortex_3427:HG3_Ill_250bpfermikitraw_10772:HG3_Ill_150bpfermikitraw_10491:HG3_CG_vcfBeta_4508:HG2_Ill_svaba_10261:HG2_Ill_scalpel_7807:HG2_Ill_manta_2312:HG2_Ill_breakscan11_1172:HG2_Ill_SpiralSDKrefine_15729:HG2_Ill_Krunchall_11374:HG2_Ill_GATKHC_13234:HG2_Ill_GATKHCSBGrefine_5551:HG2_Ill_Cortex_8292:HG2_Ill_250bpfermikitraw_11091:HG2_Ill_150bpfermikitraw_10434:HG2_CG_vcfBeta_4721;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0111732;ClusterMaxSizeDiff=0.0111732;ClusterMaxEditDist=0.0111732;PBcalls=2;Illcalls=20;TenXcalls=1;CGcalls=2;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=2;HG2count=14;HG3count=11;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-89;DistBack=21013;DistForward=153;DistMin=153;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:36878880-36878969;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3678.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:33:0|1:32:10:8:25:./.:0:0:0:0:0/1:24:16:./.:.:.:.:.:.
chr7	37477277	HG2_PB_SVrefine2PB10Xhap12_5851	TGAAATATACAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_3979:HG3_PB_assemblyticsfalcon_24538:HG2_PB_assemblyticsPBcR_23901:HG2_PB_HySA_14725:HG4_Ill_Krunchall_11709:HG2_Ill_Krunchall_11379:HG2_PB_assemblyticsfalcon_24685:HG2_PB_pbsv_8055:HG4_PB_pbsv_8069:HG3_Ill_MetaSV_4832:HG2_Ill_tnscope_929:HG2_Ill_MetaSV_4659:HG4_PB_SVrefine2Falcon1Dovetail_4914:HG4_Ill_SVrefine2DISCOVARDovetail_5866:HG4_Ill_MetaSV_4868:HG4_Ill_GATKHCSBGrefine_5640:HG4_10X_allpass_1579:HG3_PB_pbsv_7832:HG3_PB_SVrefine2Falcon1Dovetail_4869:HG3_Ill_manta_1890:HG3_Ill_SVrefine2DISCOVARDovetail_6079:HG3_Ill_GATKHCSBGrefine_5470:HG3_10X_allpass_1627:HG2_PB_SVrefine2PBcRplusDovetail_10183:HG2_PB_SVrefine2PB10Xhap12_5851:HG2_PB_SVrefine2Falcon1plusDovetail_10993:HG2_Ill_scalpel_7813:HG2_Ill_manta_2313:HG2_Ill_SVrefine2DISCOVARplusDovetail_11978:HG2_Ill_GATKHCSBGrefine_5552:HG2_10X_allpass_1354:HG2_10X_SVrefine210Xhap12_5750:HG2_Ill_breakscan11_1173;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5750:HG2_10X_allpass_1354:HG2_Ill_GATKHCSBGrefine_5552:HG2_Ill_SVrefine2DISCOVARplusDovetail_11978:HG2_Ill_manta_2313:HG2_Ill_scalpel_7813:HG2_PB_SVrefine2Falcon1plusDovetail_10993:HG2_PB_SVrefine2PB10Xhap12_5851:HG2_PB_SVrefine2PBcRplusDovetail_10183:HG3_10X_allpass_1627:HG3_Ill_GATKHCSBGrefine_5470:HG3_Ill_SVrefine2DISCOVARDovetail_6079:HG3_Ill_manta_1890:HG3_PB_SVrefine2Falcon1Dovetail_4869:HG3_PB_pbsv_7832:HG4_10X_allpass_1579:HG4_Ill_GATKHCSBGrefine_5640:HG4_Ill_MetaSV_4868:HG4_Ill_SVrefine2DISCOVARDovetail_5866:HG4_PB_SVrefine2Falcon1Dovetail_4914;NumExactMatchSVs=20;ClusterMaxShiftDist=0.123769;ClusterMaxSizeDiff=0.123769;ClusterMaxEditDist=0.166428;PBcalls=13;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-61;DistForward=-295;DistMin=-295;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=7:37477278-37477617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:85:1/1:5:21:0:38:./.:0:0:0:0:1/1:0:56:0/1:3:9:.:.:.
chr7	37998507	HG4_Ill_manta_1987	TAACATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5753:HG2_10X_allpass_1355:HG2_PB_HySA_14734:HG4_PB_assemblyticsfalcon_24135:HG3_PB_assemblyticsfalcon_24546:HG2_PB_assemblyticsPBcR_23907:HG2_PB_assemblyticsfalcon_24692:HG4_Ill_Krunchall_11713:HG3_Ill_Krunchall_11098:HG2_Ill_Krunchall_11383:HG4_PB_HySA_11879:HG4_Ill_Spiral_661:HG3_PB_HySA_12255:HG3_Ill_Spiral_8692:HG2_PB_HySA_14733:HG2_Ill_Spiral_577:HG3_PB_pbsv_7837:HG4_Ill_MetaSV_4871:HG3_Ill_MetaSV_4834:HG2_Ill_tnscope_930:HG2_Ill_MetaSV_4661:HG4_PB_pbsv_8073:HG4_PB_SVrefine2PBcRDovetail_3980:HG4_Ill_scalpel_7665:HG4_Ill_manta_1987:HG4_Ill_SVrefine2DISCOVARDovetail_5872:HG4_Ill_GATKHCSBGrefine_5643:HG4_10X_allpass_1580:HG3_PB_SVrefine2PBcRDovetail_3703:HG3_PB_SVrefine2Falcon1Dovetail_4872:HG3_Ill_scalpel_7925:HG3_Ill_manta_1891:HG3_Ill_SVrefine2DISCOVARDovetail_6085:HG3_Ill_GATKHCSBGrefine_5473:HG3_10X_allpass_1628:HG2_PB_pbsv_8058:HG2_PB_SVrefine2PBcRplusDovetail_10187:HG2_PB_SVrefine2PB10Xhap12_5855:HG2_PB_SVrefine2Falcon1plusDovetail_10997:HG2_Ill_manta_2315:HG2_Ill_SpiralSDKrefine_15734:HG2_Ill_SVrefine2DISCOVARplusDovetail_11981:HG2_Ill_GATKHCSBGrefine_5554;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5753:HG4_PB_pbsv_8073:HG4_PB_SVrefine2PBcRDovetail_3980:HG4_Ill_scalpel_7665:HG4_Ill_manta_1987:HG4_Ill_SVrefine2DISCOVARDovetail_5872:HG4_Ill_GATKHCSBGrefine_5643:HG4_10X_allpass_1580:HG3_PB_SVrefine2PBcRDovetail_3703:HG3_PB_SVrefine2Falcon1Dovetail_4872:HG3_Ill_scalpel_7925:HG3_Ill_manta_1891:HG3_Ill_SVrefine2DISCOVARDovetail_6085:HG3_Ill_GATKHCSBGrefine_5473:HG3_10X_allpass_1628:HG2_PB_pbsv_8058:HG2_PB_SVrefine2PBcRplusDovetail_10187:HG2_PB_SVrefine2PB10Xhap12_5855:HG2_PB_SVrefine2Falcon1plusDovetail_10997:HG2_Ill_manta_2315:HG2_Ill_SpiralSDKrefine_15734:HG2_Ill_SVrefine2DISCOVARplusDovetail_11981:HG2_Ill_GATKHCSBGrefine_5554;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0576;ClusterMaxSizeDiff=0.0576;ClusterMaxEditDist=0.0576;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=2661;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=7:37998508-37998831;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3680.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:1/1:0:27:0:28:./.:0:0:0:0:1/1:0:30:./.:2:17:.:.:.
chr7	39380342	HG3_10X_allpass_1629	AGGTGCATTCATATATATATATATATATATATGACTTTAAACTTCAGAAAACCATTTTTAACTTAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_8066:HG2_PB_HySA_14750:HG4_Ill_svaba_10415:HG4_Ill_scalpel_7676:HG4_Ill_manta_1990:HG4_Ill_Krunchall_11728:HG4_Ill_GATKHC_13324:HG4_Ill_GATKHCSBGrefine_5649:HG4_Ill_Cortex_3414:HG4_Ill_250bpfermikitraw_11107:HG4_Ill_150bpfermikitraw_10663:HG3_Ill_svaba_10373:HG3_Ill_scalpel_7936:HG3_Ill_manta_1894:HG3_Ill_Krunchall_11109:HG3_Ill_GATKHC_13215:HG3_Ill_GATKHCSBGrefine_5475:HG3_Ill_Cortex_3434:HG3_Ill_250bpfermikitraw_10790:HG3_Ill_150bpfermikitraw_10508:HG3_10X_allpass_1629:HG2_PB_assemblyticsfalcon_24702:HG2_PB_assemblyticsPBcR_23918:HG2_Ill_svaba_10279:HG2_Ill_scalpel_7824:HG2_Ill_manta_2316:HG2_Ill_breakscan11_1175:HG2_Ill_SpiralSDKrefine_15743:HG2_Ill_Krunchall_11394:HG2_Ill_GATKHC_13253:HG2_Ill_GATKHCSBGrefine_5555:HG2_Ill_Cortex_8304:HG2_Ill_250bpfermikitraw_11105:HG2_Ill_150bpfermikitraw_10450:HG2_10X_allpass_1356:HG4_PB_pbsv_8082:HG3_PB_pbsv_7842;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_1356:HG2_Ill_150bpfermikitraw_10450:HG2_Ill_250bpfermikitraw_11105:HG2_Ill_Cortex_8304:HG2_Ill_GATKHCSBGrefine_5555:HG2_Ill_GATKHC_13253:HG2_Ill_Krunchall_11394:HG2_Ill_SpiralSDKrefine_15743:HG2_Ill_breakscan11_1175:HG2_Ill_manta_2316:HG2_Ill_scalpel_7824:HG2_Ill_svaba_10279:HG2_PB_assemblyticsPBcR_23918:HG2_PB_assemblyticsfalcon_24702:HG3_10X_allpass_1629:HG3_Ill_150bpfermikitraw_10508:HG3_Ill_250bpfermikitraw_10790:HG3_Ill_Cortex_3434:HG3_Ill_GATKHCSBGrefine_5475:HG3_Ill_GATKHC_13215:HG3_Ill_Krunchall_11109:HG3_Ill_manta_1894:HG3_Ill_scalpel_7936:HG3_Ill_svaba_10373:HG4_Ill_150bpfermikitraw_10663:HG4_Ill_250bpfermikitraw_11107:HG4_Ill_Cortex_3414:HG4_Ill_GATKHCSBGrefine_5649:HG4_Ill_GATKHC_13324:HG4_Ill_Krunchall_11728:HG4_Ill_manta_1990:HG4_Ill_scalpel_7676:HG4_Ill_svaba_10415;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0152672;ClusterMaxSizeDiff=0.0152672;ClusterMaxEditDist=0.030303;PBcalls=6;Illcalls=29;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=29;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-65;DistBack=39883;DistForward=57005;DistMin=39883;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:39380341-39380409;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:0|1:26:1:1:29:./.:0:0:0:0:0/1:33:19:./.:.:.:.:.:.
chr7	42549700	HG3_Ill_GATKHCSBGrefine_5476	TAAAGAGGAATGAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCACAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1176:HG4_10X_allpass_1584:HG2_10X_allpass_1357:HG2_PB_pbsv_8073:HG4_PB_HySA_11912:HG3_Ill_Krunchall_11123:HG2_Ill_Krunchall_11411:HG2_PB_assemblyticsfalcon_24720:HG3_Ill_MetaSV_4839:HG2_Ill_tnscope_932:HG2_Ill_MetaSV_4667:HG4_PB_pbsv_8092:HG4_PB_SVrefine2PBcRDovetail_3991:HG4_Ill_manta_1991:HG4_Ill_MetaSV_4880:HG4_Ill_GATKHCSBGrefine_5653:HG3_PB_pbsv_7847:HG3_Ill_GATKHCSBGrefine_5476:HG3_10X_allpass_1630:HG2_PB_SVrefine2PB10Xhap12_5869:HG2_PB_SVrefine2Falcon1plusDovetail_11009:HG2_PB_HySA_14775:HG2_Ill_manta_2317:HG2_Ill_GATKHCSBGrefine_5558:HG2_10X_SVrefine210Xhap12_5762;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5762:HG2_Ill_GATKHCSBGrefine_5558:HG2_Ill_manta_2317:HG2_PB_HySA_14775:HG2_PB_SVrefine2Falcon1plusDovetail_11009:HG2_PB_SVrefine2PB10Xhap12_5869:HG3_10X_allpass_1630:HG3_Ill_GATKHCSBGrefine_5476:HG3_PB_pbsv_7847:HG4_Ill_GATKHCSBGrefine_5653:HG4_Ill_MetaSV_4880:HG4_Ill_manta_1991:HG4_PB_SVrefine2PBcRDovetail_3991:HG4_PB_pbsv_8092;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0851735;ClusterMaxSizeDiff=0.0851735;ClusterMaxEditDist=0.0851735;PBcalls=9;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=66213;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:42549701-42550036;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3682.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:36:0|1:41:2:1:35:./.:0:0:0:0:0/1:19:17:0/1:39:9:.:.:.
chr7	42604622	HG2_Ill_scalpel_7840	TAATTATTATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTCTGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_578:HG2_PB_assemblyticsPBcR_23933:HG4_Ill_Krunchall_11748:HG3_Ill_Krunchall_11124:HG2_Ill_Krunchall_11412:HG3_Ill_Spiral_8709:HG2_PB_pbsv_8074:HG4_PB_pbsv_8093:HG2_Ill_breakscan11_1177:HG4_Ill_MetaSV_4881:HG2_Ill_tnscope_933:HG2_Ill_MetaSV_4668:HG4_PB_SVrefine2PBcRDovetail_3992:HG4_Ill_scalpel_7691:HG4_Ill_GATKHCSBGrefine_5654:HG4_10X_allpass_1585:HG3_PB_SVrefine2PBcRDovetail_3710:HG3_PB_HySA_12284:HG3_Ill_scalpel_7946:HG3_Ill_manta_1895:HG3_Ill_MetaSV_4840:HG3_Ill_GATKHCSBGrefine_5477:HG3_10X_allpass_1631:HG2_PB_SVrefine2PBcRplusDovetail_10197:HG2_PB_SVrefine2PB10Xhap12_5870:HG2_PB_SVrefine2Falcon1plusDovetail_11010:HG2_Ill_scalpel_7840:HG2_Ill_manta_2318:HG2_Ill_SpiralSDKrefine_15755:HG2_Ill_GATKHCSBGrefine_5559:HG2_10X_allpass_1358:HG2_10X_SVrefine210Xhap12_5763:HG3_PB_pbsv_7848:HG4_Ill_Spiral_665;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5763:HG2_10X_allpass_1358:HG2_Ill_GATKHCSBGrefine_5559:HG2_Ill_SpiralSDKrefine_15755:HG2_Ill_manta_2318:HG2_Ill_scalpel_7840:HG2_PB_SVrefine2Falcon1plusDovetail_11010:HG2_PB_SVrefine2PB10Xhap12_5870:HG2_PB_SVrefine2PBcRplusDovetail_10197:HG3_10X_allpass_1631:HG3_Ill_GATKHCSBGrefine_5477:HG3_Ill_MetaSV_4840:HG3_Ill_manta_1895:HG3_Ill_scalpel_7946:HG3_PB_HySA_12284:HG3_PB_SVrefine2PBcRDovetail_3710:HG4_10X_allpass_1585:HG4_Ill_GATKHCSBGrefine_5654:HG4_Ill_scalpel_7691:HG4_PB_SVrefine2PBcRDovetail_3992;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0863095;ClusterMaxSizeDiff=0.0863095;ClusterMaxEditDist=0.0863095;PBcalls=10;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-342;DistBack=54907;DistForward=42678;DistMin=42678;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:42604623-42604979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3683.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:0|1:31:1:0:27:./.:0:0:0:0:0/1:26:29:0/1:25:8:.:.:.
chr7	44600172	HG2_PB_SVrefine2PB10Xhap12_5881	GAGAGGGGCCTGAAGCAGGGTCTCCCAGATGGGAGCAGGCATGGGCCCCTGCCTACTACGCCTGATACCCCTGGCCTTGACAAACATGAGACCCGTGGAGGACGAGGATGAGGGCTTCCTGTCTGAGCCCTGAGTCATGGAGGTGACAC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5770:HG2_PB_SVrefine2PB10Xhap12_5882:HG4_PB_HySA_11923:HG4_Ill_Krunchall_11756:HG2_Ill_Spiral_579:HG2_PB_HySA_14804:HG4_Ill_MetaSV_4886:HG4_PB_pbsv_8107:HG4_PB_SVrefine2PBcRDovetail_3998:HG4_Ill_svaba_10438:HG4_Ill_scalpel_7696:HG4_Ill_manta_1992:HG4_Ill_SVrefine2DISCOVARDovetail_5897:HG4_Ill_GATKHCSBGrefine_5658:HG4_Ill_Cortex_3418:HG4_Ill_250bpfermikitraw_11135:HG4_Ill_150bpfermikitraw_10691:HG4_10X_allpass_1587:HG2_PB_pbsv_8088:HG2_PB_assemblyticsPBcR_23952:HG2_PB_SVrefine2PBcRplusDovetail_10204:HG2_PB_SVrefine2PB10Xhap12_5881:HG2_Ill_svaba_10302:HG2_Ill_scalpel_7846:HG2_Ill_manta_2321:HG2_Ill_breakscan11_1178:HG2_Ill_SpiralSDKrefine_15764:HG2_Ill_MetaSV_4672:HG2_Ill_GATKHCSBGrefine_5563:HG2_Ill_Cortex_8314:HG2_10X_allpass_1360;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5770:HG4_PB_pbsv_8107:HG4_PB_SVrefine2PBcRDovetail_3998:HG4_Ill_svaba_10438:HG4_Ill_scalpel_7696:HG4_Ill_manta_1992:HG4_Ill_SVrefine2DISCOVARDovetail_5897:HG4_Ill_GATKHCSBGrefine_5658:HG4_Ill_Cortex_3418:HG4_Ill_250bpfermikitraw_11135:HG4_Ill_150bpfermikitraw_10691:HG4_10X_allpass_1587:HG2_PB_pbsv_8088:HG2_PB_assemblyticsPBcR_23952:HG2_PB_SVrefine2PBcRplusDovetail_10204:HG2_PB_SVrefine2PB10Xhap12_5881:HG2_Ill_svaba_10302:HG2_Ill_scalpel_7846:HG2_Ill_manta_2321:HG2_Ill_breakscan11_1178:HG2_Ill_SpiralSDKrefine_15764:HG2_Ill_MetaSV_4672:HG2_Ill_GATKHCSBGrefine_5563:HG2_Ill_Cortex_8314:HG2_10X_allpass_1360;NumExactMatchSVs=25;ClusterMaxShiftDist=0.020202;ClusterMaxSizeDiff=0.020202;ClusterMaxEditDist=0.020339;PBcalls=9;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-148;DistBack=5051;DistForward=5600;DistMin=5051;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=7:44600173-44600326;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:26:0|1:24:0:1:25:./.:0:0:0:0:0/1:35:16:./.:.:.:.:.:.
chr7	44910702	HG4_Ill_GATKHC_13366	TGGGCGGCCGGGCAGAGGCGCTCCCCACCTCCCAGACGGGGCAGCCGGGCAGAGGCGCTCCCCACCTCCCAGACG	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_24175:HG4_PB_pbsv_8109:HG2_PB_assemblyticsPBcR_23956:HG2_PB_pbsv_8092:HG3_PB_pbsv_7864:HG4_Ill_svaba_10441:HG4_Ill_GATKHC_13366:HG4_Ill_GATKHCSBGrefine_5659:HG4_Ill_150bpfermikitraw_10693:HG3_PB_assemblyticsfalcon_24582:HG3_Ill_svaba_10395:HG3_Ill_GATKHC_13245:HG3_Ill_GATKHCSBGrefine_5480:HG2_Ill_svaba_10305:HG2_Ill_GATKHC_13294;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHC_13294:HG2_Ill_svaba_10305:HG3_Ill_GATKHCSBGrefine_5480:HG3_Ill_GATKHC_13245:HG3_Ill_svaba_10395:HG3_PB_assemblyticsfalcon_24582:HG4_Ill_150bpfermikitraw_10693:HG4_Ill_GATKHCSBGrefine_5659:HG4_Ill_GATKHC_13366:HG4_Ill_svaba_10441;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0272109;ClusterMaxSizeDiff=0.027027;ClusterMaxEditDist=0.0408163;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-74;DistBack=27874;DistForward=-38;DistMin=-38;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=41;REFWIDENED=7:44910701-44910818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3685.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:22:0|1:23:4:5:18:./.:0:0:0:0:0/1:7:5:./.:.:.:.:.:.
chr7	44962392	HG2_PB_SVrefine2PB10Xhap12_5886	TTACCCACATATTTATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_934:HG2_10X_allpass_1361:HG3_PB_assemblyticsfalcon_24583:HG4_PB_assemblyticsfalcon_24176:HG2_PB_assemblyticsfalcon_24736:HG2_PB_assemblyticsPBcR_23957:HG3_10X_allpass_1633:HG4_10X_allpass_1588:HG2_PB_HySA_14809:HG3_PB_pbsv_7865:HG4_PB_pbsv_8110:HG4_PB_HySA_11927:HG3_PB_HySA_12306:HG4_PB_SVrefine2PBcRDovetail_3999:HG4_PB_SVrefine2Falcon1Dovetail_4932:HG4_Ill_manta_1993:HG4_Ill_SVrefine2DISCOVARDovetail_5900:HG4_Ill_MetaSV_4887:HG4_Ill_GATKHCSBGrefine_5660:HG3_PB_SVrefine2PBcRDovetail_3719:HG3_PB_SVrefine2Falcon1Dovetail_4885:HG3_Ill_SVrefine2DISCOVARDovetail_6112:HG3_Ill_MetaSV_4842:HG3_Ill_GATKHCSBGrefine_5481:HG2_PB_pbsv_8093:HG2_PB_SVrefine2PBcRplusDovetail_10207:HG2_PB_SVrefine2PB10Xhap12_5886:HG2_Ill_scalpel_7849:HG2_Ill_manta_2322:HG2_Ill_SVrefine2DISCOVARplusDovetail_12012:HG2_Ill_MetaSV_4673:HG2_Ill_GATKHCSBGrefine_5564:HG2_10X_SVrefine210Xhap12_5773;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5773:HG2_Ill_GATKHCSBGrefine_5564:HG2_Ill_MetaSV_4673:HG2_Ill_SVrefine2DISCOVARplusDovetail_12012:HG2_Ill_manta_2322:HG2_Ill_scalpel_7849:HG2_PB_SVrefine2PB10Xhap12_5886:HG2_PB_SVrefine2PBcRplusDovetail_10207:HG2_PB_pbsv_8093:HG3_Ill_GATKHCSBGrefine_5481:HG3_Ill_MetaSV_4842:HG3_Ill_SVrefine2DISCOVARDovetail_6112:HG3_PB_SVrefine2Falcon1Dovetail_4885:HG3_PB_SVrefine2PBcRDovetail_3719:HG4_Ill_GATKHCSBGrefine_5660:HG4_Ill_MetaSV_4887:HG4_Ill_SVrefine2DISCOVARDovetail_5900:HG4_Ill_manta_1993:HG4_PB_SVrefine2Falcon1Dovetail_4932:HG4_PB_SVrefine2PBcRDovetail_3999;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0971787;ClusterMaxSizeDiff=0.0971787;ClusterMaxEditDist=0.0971787;PBcalls=16;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=7808;DistForward=6737;DistMin=6737;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=7:44962393-44962734;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:./.:0:5:0:3:./.:0:0:0:0:1/1:0:33:0/1:3:14:.:.:.
chr7	46113683	HG2_Ill_SpiralSDKrefine_15777	ATGGATAAAGAAATTGTAGCATATACGTACAATGAAATATTATTTGCCCTTAAAAACAAAGTGAATTTGCCATTTGTGACAACACAGCTGAACCTGGAGGATGTGATGCTGAGTGAAATAAGCCAAGCAAGGGAGGACCAAAACTGCATGATCTCACTTCTATAGAGCATCTGAAATAGTTGAAATTATGGAAGTAGAGTATAGAATTATGGCTGCCAGGGACTATAGGTGTGCTGGGAGGAATGGGGAGTTGTTGGCCAAAGGTCTTACAGTTTCAGTTAGACAGGATGAATCGGTTCTGGAAAGCTAATGTAGAGCAATGTGAATATATTGAACAATACTCTATTATATACTTGAAATGTGCTAAGAGGGTAGATCTTAAGTGTTCCCCCCAACCAAAATAAAGTTGATAACTATGTGAGGTGATAGATACGCTAATTAGCTTGATTGTGGTGATTAATTCACAATGTATACCTATATCAAAACATCAAGTGGTACACCTTAAGTATATATCATGTACATTTGTCAATTGTATCTCAATAAACCTGGAGGGAAAAAGACACACTTTAGTCCAAGTAAAATTAATCTGCTATCCAGTGATTCTGATTGAGAACTTGAGAATGTAATGAGTCAATGGGAAGACAATTTCTGATACTCTATAGAAGTGTTCTTTTCCCCAGCTCAGTGTGAGTTCTGCTGTAGACTCAGGCCCACATTTAGAGAATTTCTCAGATTTCTATGGGAACAAGTCAGTATATTGTTTTCCCTTTAATCTGTTGTAGCCCAAAACTTTTATAAGACATAATAGAAATAAATTACTAGAACAAAGAAATGAAAAGACATAAGGAATACAAGCCCTGCTATTCATTTGTTTTTGTTTTTGATTTTTTAGATTCAACAGCCATAAATTCCACTGGTAAGTCATACTCAATTTTCTAAGGGTTCACTTTCAATTCTTGTGTTTATTTCCTTGCAAGCTGACCACAGAGTCCTGACATCTCAAAAATAAAGAGCCCTTCATGTCACAGACCCTCCCGAATATAAATTCTTTAAAGGACCCTGAGTGGCCAGGCTGGCAGCTCCTGCAGCTGTCAGGGATATGCTATGGACCCTCTCCTTCCTGGTGTCCTCCAGAGAAAAGGGGCAACTTCCCGGGGCCAAGGAGACAAAGACACTGTTGTGCAGAAGTCCAGGGGCTGATGCATCCCAGGGTGCAGATGCCTTGCTGAGGTAGCAGAGATGCCATGGATTCTTGCATCATCAAGTCGCATTTCCCCACAGTGCTCAATGCCTGCTATCTTGCTCTTCTTCTCCTTCAAATTCCCACCTTTGGAGGCATATGAATGACTGTGGGGTTGGGAAAGTTGCACATGGAATCGAGGAACATTTTAAATTATTAAATAATTCATATTACTCTTAAGTAGCTATCTACCTACTAAGACACAGCATGTGAAGCACAATATTGATTTTTTACATTGGCAACCAGATGGATGAATGCTAACATCACATTGTGAACATTTTGATTTTTCTTAAATTATCTAATAAGGTCTAATAGAATTTTTCAATAGAAAAAAATCTCAGCATTTTAAGTAAAATTATTTTAATTTAATATTCAAATTTTTTTTGTTTAACTGACAAATCATAATTGTATACAAGTATGGGATACAACATGATGTTTTAATATATGTATTCACTGTGAAATACTTAGAACAAGTTAATTGATATATCTATCACCTGACTTATGTTTCTATCTTTTTGTGGTGAGTCATTTGAAATTTACTCTCTTGTCAATAGATCTAAGTCAGTCCATGTCAGAATTCAAATAAGAATAAAATATTTTTC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_8101:HG2_10X_allpass_1362:HG4_10X_allpass_1589:HG4_Ill_Krunchall_11772:HG2_Ill_Krunchall_11439:HG2_Ill_tnscope_935:HG4_PB_pbsv_8116:HG4_Ill_MetaSV_4888:HG2_PB_SVrefine2PBcRplusDovetail_10211:HG2_PB_SVrefine2PB10Xhap12_5892:HG2_PB_SVrefine2Falcon1plusDovetail_11016:HG2_Ill_SpiralSDKrefine_15777:HG2_Ill_MetaSV_4676:HG2_10X_SVrefine210Xhap12_5775;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5775:HG2_Ill_MetaSV_4676:HG2_Ill_SpiralSDKrefine_15777:HG2_PB_SVrefine2Falcon1plusDovetail_11016:HG2_PB_SVrefine2PB10Xhap12_5892:HG2_PB_SVrefine2PBcRplusDovetail_10211:HG4_Ill_MetaSV_4888:HG4_PB_pbsv_8116;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0135391;ClusterMaxSizeDiff=0.0135391;ClusterMaxEditDist=0.0135391;PBcalls=5;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-1841;DistBack=7502;DistForward=-1841;DistMin=-1841;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:46113684-46115526;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3688.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:24:0|1:39:1:0:21:./.:0:0:0:0:0/1:63:15:0/1:159:74:1931:.:.
chr7	46366468	HG4_Ill_GATKHCSBGrefine_5666	GCCGGTGTTTGCTATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGGAGGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAGTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5894:HG2_PB_pbsv_8103:HG4_PB_pbsv_8118:HG2_PB_HySA_14826:HG3_PB_HySA_12323:HG2_Ill_MetaSV_4678:HG4_PB_SVrefine2PBcRDovetail_4000:HG4_PB_HySA_11943:HG4_Ill_scalpel_7704:HG4_Ill_MetaSV_4889:HG4_Ill_GATKHCSBGrefine_5666:HG4_10X_allpass_1590:HG3_Ill_MetaSV_4848:HG3_Ill_GATKHCSBGrefine_5487:HG2_Ill_GATKHCSBGrefine_5568:HG2_10X_allpass_1363:HG3_PB_pbsv_7877:HG2_Ill_tnscope_936:HG3_PB_SVrefine2Falcon1Dovetail_4893:HG4_PB_SVrefine2Falcon1Dovetail_4938:HG2_PB_SVrefine2Falcon1plusDovetail_11018:HG2_10X_SVrefine210Xhap12_5777:HG2_PB_SVrefine2PBcRplusDovetail_10213;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_1363:HG2_Ill_GATKHCSBGrefine_5568:HG3_Ill_GATKHCSBGrefine_5487:HG3_Ill_MetaSV_4848:HG4_10X_allpass_1590:HG4_Ill_GATKHCSBGrefine_5666:HG4_Ill_MetaSV_4889:HG4_Ill_scalpel_7704:HG4_PB_HySA_11943:HG4_PB_SVrefine2PBcRDovetail_4000;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0308642;ClusterMaxSizeDiff=0.0308642;ClusterMaxEditDist=0.0895062;PBcalls=12;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-444;DistForward=-308;DistMin=-444;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=336;REFWIDENED=7:46366151-46366807;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3689.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:0:28:1:14:./.:0:0:0:0:1/1:0:33:0/1:2:10:.:.:.
chr7	47219078	HG2_10X_SVrefine210Xhap12_5780	TTGCAGCTTGGGATGTAAGCAGTAGGCTACATTTCCTTCTGCTGGGCATGTGCCACAGCCGCCCTGCAAGCCACTGTCTGAAGGGTGTCCCTCACTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_7880:HG2_PB_HySA_14836:HG3_Ill_svaba_10407:HG3_Ill_manta_1900:HG3_Ill_GATKHCSBGrefine_5491:HG3_Ill_Cortex_3439:HG3_CG_vcfBeta_4536:HG3_10X_allpass_1638:HG2_PB_pbsv_8105:HG2_PB_assemblyticsPBcR_23976:HG2_PB_SVrefine2PBcRplusDovetail_10215:HG2_PB_SVrefine2PB10Xhap12_5896:HG2_Ill_svaba_10317:HG2_Ill_scalpel_7865:HG2_Ill_breakscan11_1181:HG2_Ill_Krunchall_11445:HG2_Ill_GATKHC_13317:HG2_Ill_GATKHCSBGrefine_5570:HG2_Ill_Cortex_8318:HG2_Ill_250bpfermikitraw_11153:HG2_CG_vcfBeta_4763:HG2_10X_allpass_1364:HG2_10X_SVrefine210Xhap12_5780;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5780:HG2_10X_allpass_1364:HG2_CG_vcfBeta_4763:HG2_Ill_250bpfermikitraw_11153:HG2_Ill_Cortex_8318:HG2_Ill_GATKHCSBGrefine_5570:HG2_Ill_GATKHC_13317:HG2_Ill_Krunchall_11445:HG2_Ill_breakscan11_1181:HG2_Ill_scalpel_7865:HG2_Ill_svaba_10317:HG2_PB_SVrefine2PB10Xhap12_5896:HG2_PB_SVrefine2PBcRplusDovetail_10215:HG2_PB_assemblyticsPBcR_23976:HG2_PB_pbsv_8105:HG3_10X_allpass_1638:HG3_CG_vcfBeta_4536:HG3_Ill_Cortex_3439:HG3_Ill_GATKHCSBGrefine_5491:HG3_Ill_manta_1900:HG3_Ill_svaba_10407;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0990099;ClusterMaxSizeDiff=0.0990099;ClusterMaxEditDist=0.138614;PBcalls=6;Illcalls=12;TenXcalls=3;CGcalls=2;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=2;HG2count=16;HG3count=7;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-96;DistBack=6415;DistForward=105408;DistMin=6415;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=7:47219079-47219178;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3690.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:32:./.:17:18:1:14:./.:0:0:0:0:0/1:35:17:./.:.:.:.:.:.
chr7	47575864	HG2_Ill_GATKHCSBGrefine_5572	TGCAATAACTTAGGGAAAGGGAGGCTGAACCTAGCGGGGAGCCAACCAGCACCGCTCTGTTTAATTCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5781:HG3_PB_HySA_12339:HG2_PB_HySA_14848:HG2_PB_pbsv_8108:HG3_PB_pbsv_7883:HG3_Ill_svaba_10415:HG3_Ill_manta_1902:HG3_Ill_SVrefine2DISCOVARDovetail_6126:HG3_Ill_Krunchall_11158:HG3_Ill_GATKHCSBGrefine_5493:HG3_Ill_250bpfermikitraw_10842:HG2_Ill_svaba_10325:HG2_Ill_manta_2324:HG2_Ill_SpiralSDKrefine_15786:HG2_Ill_GATKHCSBGrefine_5572:HG2_Ill_250bpfermikitraw_11158;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5781:HG3_Ill_svaba_10415:HG3_Ill_manta_1902:HG3_Ill_SVrefine2DISCOVARDovetail_6126:HG3_Ill_Krunchall_11158:HG3_Ill_GATKHCSBGrefine_5493:HG3_Ill_250bpfermikitraw_10842:HG2_Ill_svaba_10325:HG2_Ill_manta_2324:HG2_Ill_SpiralSDKrefine_15786:HG2_Ill_GATKHCSBGrefine_5572:HG2_Ill_250bpfermikitraw_11158;NumExactMatchSVs=12;ClusterMaxShiftDist=0.075188;ClusterMaxSizeDiff=0.075188;ClusterMaxEditDist=0.0923077;PBcalls=4;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-67;DistBack=3136;DistForward=-29;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=67;REFWIDENED=7:47575865-47575998;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3691.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:17:1|0:2:17:21:0:./.:0:0:0:0:0/1:32:17:./.:.:.:.:.:.
chr7	47895170	HG4_Ill_MetaSV_4893	TAGAAAAGTATATGCAAGAGTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTATAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5784:HG2_PB_SVrefine2PB10Xhap12_5902:HG4_Ill_Krunchall_11786:HG4_PB_assemblyticsfalcon_24202:HG4_Ill_GATKHCSBGrefine_5671:HG2_Ill_GATKHCSBGrefine_5574:HG4_Ill_manta_1995:HG2_Ill_manta_2325:HG4_Ill_MetaSV_4894:HG4_Ill_Spiral_666:HG2_Ill_Spiral_580:HG2_PB_PB10Xdip_27568:HG3_PB_SVrefine2Falcon1Dovetail_4898:HG2_PB_pbsv_8110:HG4_PB_SVrefine2Falcon1Dovetail_4943:HG2_Ill_tnscope_937:HG4_PB_pbsv_8124:HG4_PB_SVrefine2PBcRDovetail_4005:HG4_Ill_MetaSV_4893:HG4_10X_allpass_1591:HG2_PB_SVrefine2PB10Xhap12_5901:HG2_PB_SVrefine2Falcon1plusDovetail_11023:HG2_Ill_MetaSV_4682:HG2_10X_allpass_1365;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5784:HG4_PB_pbsv_8124:HG4_PB_SVrefine2PBcRDovetail_4005:HG4_Ill_MetaSV_4893:HG4_10X_allpass_1591:HG2_PB_SVrefine2PB10Xhap12_5901:HG2_PB_SVrefine2Falcon1plusDovetail_11023:HG2_Ill_MetaSV_4682:HG2_10X_allpass_1365;NumExactMatchSVs=9;ClusterMaxShiftDist=0.118936;ClusterMaxSizeDiff=0.118936;ClusterMaxEditDist=0.118936;PBcalls=10;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=4169;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=7:47895171-47895518;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9969;PctRecOverlap=0.9665;SizeDiff=1;StartDistance=-11;EndDistance=-10;GTMatch=0;TruScore=98;MatchId=3692.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:22:0|1:29:0:0:19:./.:0:0:0:0:0/1:25:14:0/1:23:7:.:.:.
chr7	48079323	HG2_Ill_Krunchall_11454	AGGATATTGTGTTAGACTCTGAACATACTGCCCCTGTGACAGTACGTTCTGATAAGTGGTATTGAATAGAAGG	A	20	PASS	ClusterIDs=HG2_PB_HySA_14852:HG4_Ill_GATKHC_13399:HG4_Ill_GATKHCSBGrefine_5672:HG3_Ill_GATKHC_13283:HG3_Ill_GATKHCSBGrefine_5495:HG2_Ill_GATKHC_13327:HG2_Ill_GATKHCSBGrefine_5575:HG4_Ill_manta_1996:HG3_Ill_manta_1903:HG2_Ill_manta_2326:HG2_Ill_SpiralSDKrefine_15788:HG4_Ill_Spiral_667:HG3_Ill_Spiral_8737:HG2_Ill_Spiral_581:HG2_PB_assemblyticsfalcon_24759:HG2_PB_assemblyticsPBcR_23987:HG4_PB_pbsv_8125:HG2_PB_pbsv_8111:HG3_PB_pbsv_7885:HG4_PB_assemblyticsfalcon_24204:HG4_Ill_svaba_10459:HG4_Ill_Krunchall_11789:HG4_Ill_250bpfermikitraw_11160:HG4_Ill_150bpfermikitraw_10718:HG3_PB_HySA_12344:HG3_Ill_svaba_10421:HG3_Ill_Krunchall_11164:HG3_Ill_250bpfermikitraw_10848:HG3_Ill_150bpfermikitraw_10557:HG2_Ill_svaba_10331:HG2_Ill_Krunchall_11454:HG2_Ill_250bpfermikitraw_11161:HG2_Ill_150bpfermikitraw_10502;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10502:HG2_Ill_250bpfermikitraw_11161:HG2_Ill_Krunchall_11454:HG2_Ill_svaba_10331:HG3_Ill_150bpfermikitraw_10557:HG3_Ill_250bpfermikitraw_10848:HG3_Ill_Krunchall_11164:HG3_Ill_svaba_10421:HG3_PB_HySA_12344:HG4_Ill_150bpfermikitraw_10718:HG4_Ill_250bpfermikitraw_11160:HG4_Ill_Krunchall_11789:HG4_Ill_svaba_10459:HG4_PB_assemblyticsfalcon_24204;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0413793;ClusterMaxSizeDiff=0.0413793;ClusterMaxEditDist=0.0422535;PBcalls=8;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-72;DistBack=19748;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=73;REFWIDENED=7:48079318-48079462;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3693.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:23:0|1:24:2:2:22:./.:0:0:0:0:0/1:24:18:./.:.:.:.:.:.
chr7	49552065	HG3_PB_pbsv_7891	TTCTACTGTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1182:HG4_Ill_Krunchall_11798:HG2_PB_pbsv_8116:HG4_PB_assemblyticsfalcon_24215:HG2_PB_assemblyticsfalcon_24770:HG2_PB_assemblyticsPBcR_23995:HG4_PB_pbsv_8133:HG4_PB_SVrefine2PBcRDovetail_4010:HG4_PB_SVrefine2Falcon1Dovetail_4949:HG4_Ill_scalpel_7720:HG4_Ill_manta_1998:HG4_Ill_SVrefine2DISCOVARDovetail_5917:HG4_Ill_GATKHCSBGrefine_5676:HG4_10X_allpass_1593:HG3_PB_pbsv_7891:HG3_PB_SVrefine2Falcon1Dovetail_4903:HG3_Ill_scalpel_7984:HG3_Ill_SVrefine2DISCOVARDovetail_6139:HG3_Ill_MetaSV_4853:HG3_Ill_GATKHCSBGrefine_5498:HG3_10X_allpass_1640:HG2_PB_SVrefine2PBcRplusDovetail_10224:HG2_PB_SVrefine2PB10Xhap12_5908:HG2_PB_SVrefine2Falcon1plusDovetail_11028:HG2_Ill_scalpel_7877:HG2_Ill_manta_2328:HG2_Ill_MetaSV_4684:HG2_Ill_GATKHCSBGrefine_5578:HG2_10X_allpass_1367:HG2_10X_SVrefine210Xhap12_5790:HG4_Ill_MetaSV_4896:HG2_Ill_tnscope_938;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5790:HG2_10X_allpass_1367:HG2_Ill_GATKHCSBGrefine_5578:HG2_Ill_MetaSV_4684:HG2_Ill_manta_2328:HG2_Ill_scalpel_7877:HG2_PB_SVrefine2Falcon1plusDovetail_11028:HG2_PB_SVrefine2PB10Xhap12_5908:HG2_PB_SVrefine2PBcRplusDovetail_10224:HG3_10X_allpass_1640:HG3_Ill_GATKHCSBGrefine_5498:HG3_Ill_MetaSV_4853:HG3_Ill_SVrefine2DISCOVARDovetail_6139:HG3_Ill_scalpel_7984:HG3_PB_SVrefine2Falcon1Dovetail_4903:HG3_PB_pbsv_7891:HG4_10X_allpass_1593:HG4_Ill_GATKHCSBGrefine_5676:HG4_Ill_SVrefine2DISCOVARDovetail_5917:HG4_Ill_manta_1998:HG4_Ill_scalpel_7720:HG4_PB_SVrefine2Falcon1Dovetail_4949:HG4_PB_SVrefine2PBcRDovetail_4010;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0604134;ClusterMaxSizeDiff=0.0604134;ClusterMaxEditDist=0.0604134;PBcalls=12;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=1950;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=7:49552066-49552393;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3694.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:40:0|1:35:0:2:38:./.:0:0:0:0:0/1:26:18:0/1:23:9:.:.:.
chr7	51691895	HG4_Ill_manta_2003	TAAGAGTGAGGAGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5796:HG2_Ill_Krunchall_11485:HG4_Ill_Krunchall_11816:HG2_PB_SVrefine2PB10Xhap12_5913:HG2_PB_PB10Xdip_28041:HG2_PB_PB10Xdip_28040:HG4_Ill_Krunchall_11815:HG2_Ill_Krunchall_11484:HG2_PB_assemblyticsPBcR_24011:HG2_Ill_MetaSV_4688:HG4_PB_pbsv_8143:HG4_PB_assemblyticsfalcon_24231:HG4_PB_SVrefine2PBcRDovetail_4015:HG4_PB_SVrefine2Falcon1Dovetail_4953:HG4_Ill_scalpel_7732:HG4_Ill_manta_2003:HG4_Ill_SVrefine2DISCOVARDovetail_5926:HG4_Ill_MetaSV_4902:HG4_Ill_GATKHCSBGrefine_5683:HG4_10X_allpass_1596:HG3_PB_assemblyticsfalcon_24638:HG3_PB_SVrefine2Falcon1Dovetail_4906:HG2_PB_pbsv_8122:HG2_PB_SVrefine2PBcRplusDovetail_10228:HG2_PB_SVrefine2PB10Xhap12_5912:HG2_Ill_manta_2333:HG2_Ill_breakscan11_1183:HG2_Ill_GATKHCSBGrefine_5583:HG2_10X_allpass_1369;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5796:HG4_PB_pbsv_8143:HG4_PB_assemblyticsfalcon_24231:HG4_PB_SVrefine2PBcRDovetail_4015:HG4_PB_SVrefine2Falcon1Dovetail_4953:HG4_Ill_scalpel_7732:HG4_Ill_manta_2003:HG4_Ill_SVrefine2DISCOVARDovetail_5926:HG4_Ill_MetaSV_4902:HG4_Ill_GATKHCSBGrefine_5683:HG4_10X_allpass_1596:HG3_PB_assemblyticsfalcon_24638:HG3_PB_SVrefine2Falcon1Dovetail_4906:HG2_PB_pbsv_8122:HG2_PB_SVrefine2PBcRplusDovetail_10228:HG2_PB_SVrefine2PB10Xhap12_5912:HG2_Ill_manta_2333:HG2_Ill_breakscan11_1183:HG2_Ill_GATKHCSBGrefine_5583:HG2_10X_allpass_1369;NumExactMatchSVs=20;ClusterMaxShiftDist=0.344942;ClusterMaxSizeDiff=0.344942;ClusterMaxEditDist=0.344942;PBcalls=13;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=17572;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:51691896-51692232;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:26:0|1:32:0:1:26:./.:0:0:0:0:0/1:29:14:0/1:23:10:.:.:.
chr7	52094962	HG3_Ill_svaba_10452	TAAAAAATGACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAATTACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1184:HG3_10X_allpass_1643:HG4_Ill_Krunchall_11821:HG3_PB_pbsv_7902:HG3_Ill_Krunchall_11200:HG4_PB_assemblyticsfalcon_24236:HG3_PB_assemblyticsfalcon_24643:HG2_PB_assemblyticsfalcon_24793:HG2_PB_assemblyticsPBcR_24017:HG4_PB_pbsv_8145:HG2_PB_HySA_14889:HG4_Ill_MetaSV_4903:HG3_Ill_MetaSV_4857:HG2_Ill_tnscope_939:HG4_PB_SVrefine2PBcRDovetail_4017:HG4_PB_SVrefine2Falcon1Dovetail_4954:HG4_Ill_svaba_10488:HG4_Ill_scalpel_7737:HG4_Ill_manta_2004:HG4_Ill_SVrefine2DISCOVARDovetail_5929:HG4_Ill_GATKHCSBGrefine_5684:HG4_10X_allpass_1597:HG3_PB_SVrefine2PBcRDovetail_3726:HG3_PB_SVrefine2Falcon1Dovetail_4907:HG3_Ill_svaba_10452:HG3_Ill_scalpel_8000:HG3_Ill_manta_1909:HG3_Ill_SVrefine2DISCOVARDovetail_6152:HG3_Ill_GATKHCSBGrefine_5506:HG2_PB_pbsv_8124:HG2_PB_SVrefine2PBcRplusDovetail_10229:HG2_PB_SVrefine2PB10Xhap12_5914:HG2_PB_SVrefine2Falcon1plusDovetail_11032:HG2_Ill_svaba_10361:HG2_Ill_scalpel_7891:HG2_Ill_manta_2334:HG2_Ill_SVrefine2DISCOVARplusDovetail_12038:HG2_Ill_MetaSV_4689:HG2_Ill_GATKHCSBGrefine_5584:HG2_10X_SVrefine210Xhap12_5798;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5798:HG2_Ill_GATKHCSBGrefine_5584:HG2_Ill_MetaSV_4689:HG2_Ill_SVrefine2DISCOVARplusDovetail_12038:HG2_Ill_manta_2334:HG2_Ill_scalpel_7891:HG2_Ill_svaba_10361:HG2_PB_SVrefine2Falcon1plusDovetail_11032:HG2_PB_SVrefine2PB10Xhap12_5914:HG2_PB_SVrefine2PBcRplusDovetail_10229:HG2_PB_pbsv_8124:HG3_Ill_GATKHCSBGrefine_5506:HG3_Ill_SVrefine2DISCOVARDovetail_6152:HG3_Ill_manta_1909:HG3_Ill_scalpel_8000:HG3_Ill_svaba_10452:HG3_PB_SVrefine2Falcon1Dovetail_4907:HG3_PB_SVrefine2PBcRDovetail_3726:HG4_10X_allpass_1597:HG4_Ill_GATKHCSBGrefine_5684:HG4_Ill_SVrefine2DISCOVARDovetail_5929:HG4_Ill_manta_2004:HG4_Ill_scalpel_7737:HG4_Ill_svaba_10488:HG4_PB_SVrefine2Falcon1Dovetail_4954:HG4_PB_SVrefine2PBcRDovetail_4017;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0776699;ClusterMaxSizeDiff=0.0776699;ClusterMaxEditDist=0.0776699;PBcalls=15;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=4556;DistForward=11791;DistMin=4556;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=7:52094963-52095287;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:0:32:0:31:./.:0:0:0:0:1/1:0:49:0/1:2:13:.:.:.
chr7	52107107	HG4_Ill_scalpel_7738	GAAAAGTAAAAGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGGGAGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTGACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCGCTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5799:HG4_PB_pbsv_8146:HG4_Ill_Krunchall_11822:HG2_PB_pbsv_8125:HG2_PB_assemblyticsPBcR_24018:HG4_PB_assemblyticsfalcon_24237:HG2_PB_SVrefine2PB10Xhap12_5916:HG2_PB_assemblyticsfalcon_24794:HG2_Ill_breakscan11_1185:HG2_PB_PB10Xdip_28043:HG2_PB_PB10Xdip_28042:HG4_Ill_MetaSV_4904:HG2_PB_HySA_14890:HG2_Ill_tnscope_940:HG4_PB_SVrefine2PBcRDovetail_4018:HG4_PB_SVrefine2Falcon1Dovetail_4955:HG4_Ill_scalpel_7738:HG4_Ill_manta_2005:HG4_Ill_SVrefine2DISCOVARDovetail_5930:HG4_Ill_GATKHCSBGrefine_5685:HG4_10X_allpass_1598:HG2_PB_SVrefine2PBcRplusDovetail_10230:HG2_PB_SVrefine2PB10Xhap12_5915:HG2_PB_SVrefine2Falcon1plusDovetail_11033:HG2_Ill_manta_2335:HG2_Ill_SVrefine2DISCOVARplusDovetail_12039:HG2_Ill_GATKHCSBGrefine_5585:HG2_10X_allpass_1370;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5799:HG2_PB_PB10Xdip_28042:HG4_PB_SVrefine2PBcRDovetail_4018:HG4_PB_SVrefine2Falcon1Dovetail_4955:HG4_Ill_scalpel_7738:HG4_Ill_manta_2005:HG4_Ill_SVrefine2DISCOVARDovetail_5930:HG4_Ill_GATKHCSBGrefine_5685:HG4_10X_allpass_1598:HG2_PB_SVrefine2PBcRplusDovetail_10230:HG2_PB_SVrefine2PB10Xhap12_5915:HG2_PB_SVrefine2Falcon1plusDovetail_11033:HG2_Ill_manta_2335:HG2_Ill_SVrefine2DISCOVARplusDovetail_12039:HG2_Ill_GATKHCSBGrefine_5585:HG2_10X_allpass_1370;NumExactMatchSVs=16;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.08;PBcalls=14;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-460;DistForward=-305;DistMin=-460;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=7:52107108-52107437;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3697.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:38:0|1:31:2:3:33:./.:0:0:0:0:0/1:22:26:0/1:23:12:.:.:.
chr7	52520171	HG3_PB_assemblyticsfalcon_24652	TATGAAGATATCGATAATGCTGTTGAGGCTCATTGTCCACACTGTTTCACAATGCTGGGGCCAGAGGAGAGAACCACGTCAGAAACTTAGTGGGATGAACTGAAATTATGATGGATTCAAATTTCAGCCCACTTCTGAGTAATGAAGGAAGAGATAATGATATTGTTCTGGGCTCAGAGACAGCAAGATGCCATTTTGTCCCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_8129:HG3_PB_HySA_12379:HG3_Ill_Krunchall_11210:HG2_Ill_Krunchall_11498:HG3_Ill_Krunchall_11209:HG2_Ill_Krunchall_11497:HG3_Ill_MetaSV_4860:HG3_PB_pbsv_7907:HG3_PB_assemblyticsfalcon_24652:HG3_PB_SVrefine2PBcRDovetail_3731:HG3_PB_SVrefine2Falcon1Dovetail_4912:HG3_Ill_manta_1911:HG3_Ill_SVrefine2DISCOVARDovetail_6154:HG3_Ill_GATKHCSBGrefine_5508:HG2_PB_assemblyticsfalcon_24800:HG2_PB_assemblyticsPBcR_24024:HG2_PB_SVrefine2PBcRplusDovetail_10233:HG2_PB_SVrefine2Falcon1plusDovetail_11036:HG2_Ill_breakscan11_1186:HG2_Ill_SVrefine2DISCOVARplusDovetail_12042:HG2_Ill_MetaSV_4691:HG2_Ill_GATKHCSBGrefine_5586:HG2_10X_allpass_1371:HG2_10X_SVrefine210Xhap12_5803;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5803:HG2_10X_allpass_1371:HG2_Ill_GATKHCSBGrefine_5586:HG2_Ill_MetaSV_4691:HG2_Ill_SVrefine2DISCOVARplusDovetail_12042:HG2_Ill_breakscan11_1186:HG2_PB_SVrefine2Falcon1plusDovetail_11036:HG2_PB_SVrefine2PBcRplusDovetail_10233:HG2_PB_assemblyticsPBcR_24024:HG2_PB_assemblyticsfalcon_24800:HG3_Ill_GATKHCSBGrefine_5508:HG3_Ill_SVrefine2DISCOVARDovetail_6154:HG3_Ill_manta_1911:HG3_PB_SVrefine2Falcon1Dovetail_4912:HG3_PB_SVrefine2PBcRDovetail_3731:HG3_PB_assemblyticsfalcon_24652:HG3_PB_pbsv_7907;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0349127;ClusterMaxSizeDiff=0.0349127;ClusterMaxEditDist=0.0651629;PBcalls=10;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-202;DistBack=38409;DistForward=-199;DistMin=-199;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:52520172-52520375;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3698.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:24:0|1:23:5:5:17:./.:0:0:0:0:0/1:48:23:./.:.:.:.:.:.
chr7	52802857	HG3_Ill_manta_1912	TTCATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_941:HG3_10X_allpass_1645:HG2_Ill_Krunchall_11505:HG3_PB_pbsv_7912:HG3_Ill_manta_1912:HG3_Ill_SVrefine2DISCOVARDovetail_6157:HG3_Ill_GATKHCSBGrefine_5511:HG2_PB_pbsv_8133:HG2_PB_assemblyticsfalcon_24807:HG2_PB_SVrefine2PB10Xhap12_5921:HG2_PB_SVrefine2Falcon1plusDovetail_11040:HG2_Ill_scalpel_7901:HG2_Ill_SVrefine2DISCOVARplusDovetail_12045:HG2_Ill_MetaSV_4694:HG2_Ill_GATKHCSBGrefine_5590:HG2_10X_SVrefine210Xhap12_5805;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5805:HG2_Ill_GATKHCSBGrefine_5590:HG2_Ill_MetaSV_4694:HG2_Ill_SVrefine2DISCOVARplusDovetail_12045:HG2_Ill_scalpel_7901:HG2_PB_SVrefine2Falcon1plusDovetail_11040:HG2_PB_SVrefine2PB10Xhap12_5921:HG2_PB_assemblyticsfalcon_24807:HG2_PB_pbsv_8133:HG3_Ill_GATKHCSBGrefine_5511:HG3_Ill_SVrefine2DISCOVARDovetail_6157:HG3_Ill_manta_1912:HG3_PB_pbsv_7912;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0198676;ClusterMaxSizeDiff=0.0198676;ClusterMaxEditDist=0.029703;PBcalls=5;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-299;DistBack=-299;DistForward=-300;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=7:52802858-52803164;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3699.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:32:0|1:46:1:1:29:./.:0:0:0:0:0/1:25:27:0/1:24:6:.:.:.
chr7	53311753	HG2_Ill_GATKHCSBGrefine_5597	TCCAGAGCGCTTTTCATCCTGGAAAACTGAAACTCCATACTCAACAACCAACGACTCCCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_8155:HG4_Ill_manta_2007:HG4_Ill_Krunchall_11837:HG4_Ill_GATKHC_13447:HG4_Ill_GATKHCSBGrefine_5689:HG4_Ill_250bpfermikitraw_11205:HG4_Ill_150bpfermikitraw_10761:HG4_10X_allpass_1600:HG2_PB_pbsv_8138:HG2_PB_assemblyticsfalcon_24814:HG2_Ill_manta_2338:HG2_Ill_breakscan11_1187:HG2_Ill_Krunchall_11511:HG2_Ill_GATKHC_13388:HG2_Ill_GATKHCSBGrefine_5597:HG2_Ill_250bpfermikitraw_11210:HG2_Ill_150bpfermikitraw_10549;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10549:HG2_Ill_250bpfermikitraw_11210:HG2_Ill_GATKHCSBGrefine_5597:HG2_Ill_GATKHC_13388:HG2_Ill_Krunchall_11511:HG2_Ill_breakscan11_1187:HG2_Ill_manta_2338:HG2_PB_assemblyticsfalcon_24814:HG2_PB_pbsv_8138:HG4_10X_allpass_1600:HG4_Ill_150bpfermikitraw_10761:HG4_Ill_250bpfermikitraw_11205:HG4_Ill_GATKHCSBGrefine_5689:HG4_Ill_GATKHC_13447:HG4_Ill_Krunchall_11837:HG4_Ill_manta_2007;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0166667;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0833333;PBcalls=3;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-59;DistBack=6170;DistForward=-43;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=7:53311754-53311815;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3700.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:17:0|1:33:1:2:16:./.:0:0:0:0:0/1:33:20:./.:.:.:.:.:.
chr7	53702933	HG3_PB_HySA_12392	AGCAGGAGAATTGCTTGAACCAGGGAGTCAGAGGTTGCCGTGAGCCGAGATCGCACCACTGCACTCCAGTCTGGCAACAGAGCAAGAGTCTGTCTCAAAAAAAAAAAAAAAAAAAAATTAGCCAGGCATGGTGGCATGTGCCTGTAATCCCAGCTACTCAGGCAGCTGAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5811:HG2_Ill_Krunchall_11515:HG3_PB_pbsv_7919:HG4_Ill_Spiral_668:HG4_PB_pbsv_8157:HG2_PB_pbsv_8141:HG4_PB_HySA_12002:HG2_PB_HySA_14912:HG2_Ill_MetaSV_4697:HG4_Ill_svaba_10496:HG4_Ill_scalpel_7746:HG4_Ill_MetaSV_4906:HG4_Ill_GATKHC_13449:HG4_Ill_GATKHCSBGrefine_5690:HG4_Ill_250bpfermikitraw_11208:HG4_Ill_150bpfermikitraw_10763:HG4_10X_allpass_1602:HG3_PB_HySA_12392:HG3_Ill_svaba_10472:HG3_Ill_manta_1916:HG3_Ill_MetaSV_4869:HG3_Ill_GATKHC_13352:HG3_Ill_GATKHCSBGrefine_5518:HG3_10X_allpass_1649:HG2_Ill_svaba_10376:HG2_Ill_scalpel_7910:HG2_Ill_SpiralSDKrefine_15830:HG2_Ill_GATKHC_13391:HG2_Ill_GATKHCSBGrefine_5598:HG3_Ill_Spiral_8788:HG2_Ill_Spiral_582:HG4_PB_SVrefine2Falcon1Dovetail_4965:HG4_Ill_SVrefine2DISCOVARDovetail_5936:HG3_PB_SVrefine2Falcon1Dovetail_4919:HG3_Ill_SVrefine2DISCOVARDovetail_6162:HG2_PB_SVrefine2PBcRplusDovetail_10239:HG2_PB_SVrefine2PB10Xhap12_5924:HG2_PB_SVrefine2Falcon1plusDovetail_11044:HG2_Ill_SVrefine2DISCOVARplusDovetail_12049;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5598:HG2_Ill_GATKHC_13391:HG2_Ill_SpiralSDKrefine_15830:HG2_Ill_scalpel_7910:HG2_Ill_svaba_10376:HG3_10X_allpass_1649:HG3_Ill_GATKHCSBGrefine_5518:HG3_Ill_GATKHC_13352:HG3_Ill_MetaSV_4869:HG3_Ill_manta_1916:HG3_Ill_svaba_10472:HG3_PB_HySA_12392:HG4_10X_allpass_1602:HG4_Ill_150bpfermikitraw_10763:HG4_Ill_250bpfermikitraw_11208:HG4_Ill_GATKHCSBGrefine_5690:HG4_Ill_GATKHC_13449:HG4_Ill_MetaSV_4906:HG4_Ill_scalpel_7746:HG4_Ill_svaba_10496;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0117647;ClusterMaxSizeDiff=0.0117647;ClusterMaxEditDist=0.0825959;PBcalls=11;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-169;DistBack=124436;DistForward=-87;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=151;REFWIDENED=7:53702868-53703187;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3701.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:1/1:4:39:1:24:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr7	55305335	HG4_Ill_Krunchall_11853	AGCTTCATCTCACAGGAGGACAGGCGCACAGCCCCTCCTCCTGATCCGAGGCTCTGATTAAGAATG	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_11225:HG3_PB_HySA_12403:HG2_PB_pbsv_8147:HG3_PB_pbsv_7930:HG4_PB_pbsv_8166:HG4_PB_HySA_12011:HG4_PB_assemblyticsfalcon_24281:HG4_Ill_Krunchall_11853:HG4_Ill_GATKHC_13461:HG4_Ill_GATKHCSBGrefine_5694:HG4_Ill_250bpfermikitraw_11222:HG3_PB_assemblyticsfalcon_24690:HG3_Ill_Krunchall_11243:HG3_Ill_GATKHC_13368:HG3_Ill_GATKHCSBGrefine_5522:HG3_Ill_250bpfermikitraw_10920:HG3_Ill_150bpfermikitraw_10627:HG2_Ill_Krunchall_11526:HG2_Ill_GATKHC_13406:HG2_Ill_GATKHCSBGrefine_5601;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11225:HG4_PB_assemblyticsfalcon_24281:HG4_Ill_Krunchall_11853:HG4_Ill_GATKHC_13461:HG4_Ill_GATKHCSBGrefine_5694:HG4_Ill_250bpfermikitraw_11222:HG3_PB_assemblyticsfalcon_24690:HG3_Ill_Krunchall_11243:HG3_Ill_GATKHC_13368:HG3_Ill_GATKHCSBGrefine_5522:HG3_Ill_250bpfermikitraw_10920:HG3_Ill_150bpfermikitraw_10627:HG2_Ill_Krunchall_11526:HG2_Ill_GATKHC_13406:HG2_Ill_GATKHCSBGrefine_5601;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0458015;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.0465116;PBcalls=7;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-65;DistBack=12;DistForward=17348;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=193;REFWIDENED=7:55305258-55305515;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3702.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:17:./.:24:8:3:15:./.:0:0:0:0:0/1:29:16:./.:.:.:.:.:.
chr7	55409861	HG4_10X_allpass_1605	GCCTCGGCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCCAAAGAAAGTAATTTCTGAGCTGCTTTTTGTTAAAAGGAAAGTTTTTGCCGGGGACTCTTGCACCCTATCAACCTAAATAATTTCTATCTTCTGTATAGGAGTCCAGGGGTCAGGGCAGAGGCGCAGGTGGTGCGACGCCACGGAGTTGGTCCCCATGGCCGTGAGCCAGCCCCAGCGGCACAGCCGCCCTGTC	G	20	PASS	ClusterIDs=HG2_PB_pbsv_8149:HG2_PB_SVrefine2PBcRplusDovetail_10247:HG4_PB_assemblyticsfalcon_24285:HG2_PB_assemblyticsfalcon_24837:HG2_PB_assemblyticsPBcR_24061:HG4_Ill_MetaSV_4911:HG4_PB_pbsv_8167:HG4_PB_SVrefine2PBcRDovetail_4028:HG4_PB_SVrefine2Falcon1Dovetail_4973:HG4_Ill_GATKHCSBGrefine_5695:HG4_10X_allpass_1605:HG3_PB_assemblyticsfalcon_24694:HG3_PB_SVrefine2Falcon1Dovetail_4926:HG2_PB_SVrefine2Falcon1plusDovetail_11050:HG2_Ill_GATKHCSBGrefine_5602:HG2_10X_allpass_1375:HG2_10X_SVrefine210Xhap12_5819:HG2_Ill_breakscan11_1188;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5819:HG2_10X_allpass_1375:HG2_Ill_GATKHCSBGrefine_5602:HG2_PB_SVrefine2Falcon1plusDovetail_11050:HG3_PB_SVrefine2Falcon1Dovetail_4926:HG3_PB_assemblyticsfalcon_24694:HG4_10X_allpass_1605:HG4_Ill_GATKHCSBGrefine_5695:HG4_PB_SVrefine2Falcon1Dovetail_4973:HG4_PB_SVrefine2PBcRDovetail_4028:HG4_PB_pbsv_8167;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0204082;ClusterMaxSizeDiff=0.0204082;ClusterMaxEditDist=0.0204082;PBcalls=11;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=3;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-245;DistBack=3165;DistForward=-246;DistMin=-246;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:55409862-55410108;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:24:./.:24:4:10:15:./.:0:0:0:0:0/1:22:4:./.:.:.:.:.:.
chr7	55955399	HG4_Ill_150bpfermikitraw_10782	AGGCGGGAGGCGGAGGCGGGGGGCGGAGGCGGGGGGCGGAGGCGGGGGGCGGAGGCGGGGGGCGGAGGCGGGGGGCGGAGGCGGGG	A	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_6168:HG4_Ill_GATKHC_13468:HG3_Ill_GATKHC_13375:HG3_Ill_GATKHCSBGrefine_5523:HG4_Ill_Krunchall_11859:HG3_Ill_250bpfermikitraw_10926:HG2_PB_HySA_14941:HG4_Ill_250bpfermikitraw_11228:HG2_PB_pbsv_8151:HG4_Ill_250bpfermikitraw_11227:HG4_Ill_150bpfermikitraw_10782:HG2_Ill_GATKHCSBGrefine_5604:HG2_Ill_250bpfermikitraw_11230:HG3_PB_pbsv_7932:HG4_PB_pbsv_8169:HG4_PB_SVrefine2PBcRDovetail_4029:HG2_PB_SVrefine2PBcRplusDovetail_10250:HG2_PB_SVrefine2PB10Xhap12_5934:HG2_PB_SVrefine2Falcon1plusDovetail_11052;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11230:HG2_Ill_GATKHCSBGrefine_5604:HG4_Ill_150bpfermikitraw_10782:HG4_Ill_250bpfermikitraw_11227;NumExactMatchSVs=4;ClusterMaxShiftDist=0.265896;ClusterMaxSizeDiff=0.265896;ClusterMaxEditDist=0.265896;PBcalls=8;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-85;DistBack=-137;DistForward=-46;DistMin=-137;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=7:55955398-55955490;PctSeqSimilarity=0.8873;PctSizeSimilarity=0.8586;PctRecOverlap=0.73;SizeDiff=-14;StartDistance=-13;EndDistance=-27;GTMatch=0;TruScore=82;MatchId=3704.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:12:26:./.:10:5:1:21:./.:0:0:0:0:0/1:6:5:./.:.:.:.:.:.
chr7	55971770	HG2_Ill_SVrefine2DISCOVARplusDovetail_12061	AAAGAGACTAGATCACAGCTCCCTGAGAGAGACGGTGGAAGTAAAGCAAGAGTCACCAGTCACCAGTCACCCGTATCAGATACTGTCTTGGAAGAAGTAATGAGGTCAGGCCAGGCCTGATGGCTCACACCTGCAATCCCAGCACCAGGCCGAGGCGGGTGGATCACTTGAGCTAAGGAGTTTGAAACCAGCCTCGGCAACGTGGTGAAACCTCACTTCTACTAAAAATACAAAAATTAGCCAGGCATGGTAGTGTACACCTGTAATTCCCAGCTACTTGGGAGGCTGAAGTGGGAGGACAGCTTGGGTCCAGGAGGCAGAGGTTGCAGTGAGCTAAGATCACACCACTGCACCCTAGCCAGGAC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_8170:HG2_PB_assemblyticsfalcon_24844:HG2_PB_assemblyticsPBcR_24068:HG4_10X_allpass_1606:HG2_10X_allpass_1376:HG4_PB_HySA_12022:HG4_PB_SVrefine2PBcRDovetail_4030:HG4_Ill_GATKHCSBGrefine_5697:HG3_PB_SVrefine2Falcon1Dovetail_4927:HG2_PB_SVrefine2PBcRplusDovetail_10251:HG2_PB_SVrefine2PB10Xhap12_5935:HG2_PB_SVrefine2Falcon1plusDovetail_11053:HG2_Ill_SVrefine2DISCOVARplusDovetail_12061:HG2_Ill_MetaSV_4700:HG2_10X_SVrefine210Xhap12_5822:HG2_PB_HySA_14942:HG2_Ill_tnscope_944:HG2_PB_pbsv_8152;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5822:HG2_Ill_MetaSV_4700:HG2_Ill_SVrefine2DISCOVARplusDovetail_12061:HG2_PB_SVrefine2Falcon1plusDovetail_11053:HG2_PB_SVrefine2PB10Xhap12_5935:HG2_PB_SVrefine2PBcRplusDovetail_10251:HG3_PB_SVrefine2Falcon1Dovetail_4927:HG4_Ill_GATKHCSBGrefine_5697:HG4_PB_SVrefine2PBcRDovetail_4030;NumExactMatchSVs=9;ClusterMaxShiftDist=0.116992;ClusterMaxSizeDiff=0.116992;ClusterMaxEditDist=0.116992;PBcalls=11;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-364;DistBack=8625;DistForward=-360;DistMin=-360;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=7:55971771-55972140;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3705.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:32:0|1:21:0:5:28:./.:0:0:0:0:./.:34:3:0/1:24:10:.:.:.
chr7	61880664	HG3_Ill_MetaSV_4884	AAAGAGAACATTGAGGCATATGGAGGAAAATGAAATATCTTAAGATACAAACTAGAAAGAAGTTTTCTGAGAAACTGTTTTGTGGTGTGTGCATTCATCTCATAAAGTTAAACCTTTCTTTTGAATGAGCAGTTTGGAAACGCTGTCTTTGCAGAATCTGGGAAGGG	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_4948:HG2_PB_assemblyticsfalcon_24869:HG4_Ill_SVrefine2DISCOVARDovetail_5963:HG3_PB_SVrefine2PBcRDovetail_3754:HG2_PB_SVrefine2Falcon1plusDovetail_11076:HG2_10X_SVrefine210Xhap12_5837:HG4_Ill_GATKHC_13507:HG4_Ill_GATKHCSBGrefine_5718:HG3_Ill_MetaSV_4884:HG3_Ill_GATKHC_13398:HG3_Ill_GATKHCSBGrefine_5538:HG3_10X_allpass_1657:HG2_Ill_SpiralSDKrefine_15863:HG2_Ill_MetaSV_4714:HG2_Ill_GATKHC_13445:HG2_Ill_GATKHCSBGrefine_5621:HG4_PB_pbsv_8203:HG3_PB_pbsv_7964:HG2_PB_pbsv_8180:HG4_PB_SVrefine2PBcRDovetail_4066;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5621:HG2_Ill_GATKHC_13445:HG2_Ill_MetaSV_4714:HG2_Ill_SpiralSDKrefine_15863:HG3_10X_allpass_1657:HG3_Ill_GATKHCSBGrefine_5538:HG3_Ill_GATKHC_13398:HG3_Ill_MetaSV_4884:HG4_Ill_GATKHCSBGrefine_5718:HG4_Ill_GATKHC_13507;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0060241;ClusterMaxSizeDiff=0.00600601;ClusterMaxEditDist=0.197605;PBcalls=8;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-166;DistBack=14012;DistForward=-160;DistMin=-160;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1059;REFWIDENED=7:61880506-61881730;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3706.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:38:./.:48:19:8:20:./.:0:0:0:0:0/1:70:43:./.:.:.:.:.:.
chr7	64315807	HG2_PB_SVrefine2Falcon1plusDovetail_11086	TAAGAATTTTATTTTATCTTGCGTGCAAAAATGTAAGGGGGCCTCTCCCTCTCCCTCTCCCTCTCCGTCTCCCTCTCCCTCTCCGTCTCCCTCTCCCTCTCCCTCTCCCTCTCACTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACACCTGACTGGTCTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAGCCTTGGCCTCCCGAGGTGCCAGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGACTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTACACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCATCTGGGAAGTGAGGAGCGTCTCTGCCTGGCTGCCCATCGTCTGGGATGTGAGGAGCCTCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTGCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGTGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCTGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTCGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCAGCCTGGCCAGCTGCCCCGTCCGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCTGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTTTGCCCGGCCAGCCGCCCAGTCTGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCGGCCAGCTGCCCGTCCGGGAGGTGAGGGGCACCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCTGCCCCGTCTGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCCGCCCGGCCAGCTGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCAGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAAGGGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCTGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCACCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACAACCAAGAATTATCAATAAAAAAATAAATTTAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1191:HG2_PB_assemblyticsfalcon_24881:HG2_PB_assemblyticsPBcR_24103:HG4_PB_assemblyticsfalcon_24334:HG3_PB_assemblyticsfalcon_24738:HG2_10X_allpass_1385:HG3_10X_allpass_1661:HG4_Ill_Krunchall_11901:HG3_Ill_Krunchall_11299:HG2_Ill_Krunchall_11580:HG4_10X_allpass_1621:HG2_Ill_tnscope_950:HG4_PB_pbsv_8222:HG4_PB_SVrefine2PBcRDovetail_4077:HG4_PB_SVrefine2Falcon1Dovetail_4998:HG4_Ill_SVrefine2DISCOVARDovetail_5975:HG4_Ill_MetaSV_4937:HG4_Ill_GATKHCSBGrefine_5729:HG3_PB_pbsv_7986:HG3_PB_SVrefine2PBcRDovetail_3766:HG3_PB_SVrefine2Falcon1Dovetail_4963:HG3_Ill_SVrefine2DISCOVARDovetail_6188:HG3_Ill_MetaSV_4894:HG3_Ill_GATKHCSBGrefine_5553:HG2_PB_pbsv_8199:HG2_PB_SVrefine2PBcRplusDovetail_10287:HG2_PB_SVrefine2PB10Xhap12_5981:HG2_PB_SVrefine2Falcon2Bionano_3972:HG2_PB_SVrefine2Falcon1plusDovetail_11086:HG2_Ill_SVrefine2DISCOVARplusDovetail_12092:HG2_Ill_MetaSV_4720:HG2_Ill_GATKHCSBGrefine_5635:HG2_10X_SVrefine210Xhap12_5851;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5851:HG2_Ill_GATKHCSBGrefine_5635:HG2_Ill_MetaSV_4720:HG2_Ill_SVrefine2DISCOVARplusDovetail_12092:HG2_PB_SVrefine2Falcon1plusDovetail_11086:HG2_PB_SVrefine2Falcon2Bionano_3972:HG2_PB_SVrefine2PB10Xhap12_5981:HG2_PB_SVrefine2PBcRplusDovetail_10287:HG2_PB_pbsv_8199:HG3_Ill_GATKHCSBGrefine_5553:HG3_Ill_MetaSV_4894:HG3_Ill_SVrefine2DISCOVARDovetail_6188:HG3_PB_SVrefine2Falcon1Dovetail_4963:HG3_PB_SVrefine2PBcRDovetail_3766:HG3_PB_pbsv_7986:HG4_Ill_GATKHCSBGrefine_5729:HG4_Ill_MetaSV_4937:HG4_Ill_SVrefine2DISCOVARDovetail_5975:HG4_PB_SVrefine2Falcon1Dovetail_4998:HG4_PB_SVrefine2PBcRDovetail_4077:HG4_PB_pbsv_8222;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0147059;ClusterMaxSizeDiff=0.0147059;ClusterMaxEditDist=0.0147059;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2251;DistBack=25869;DistForward=32540;DistMin=25869;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=7:64315808-64318075;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:106:1/1:0:18:0:7:./.:0:0:0:0:1/1:0:28:1/1:2:164:1602:.:.
chr7	64413377	HG4_PB_SVrefine2Falcon1Dovetail_4999	GTTCTCTTTTGATGTTCCTTACAATGTGTCCCTGCCATTTTTCATGGAAGGAAAACTGAGGATAATAACCAGTTAATTTCTGGTGATATTTTATAGGAGAAGCATTAGTGGTAAGATTTCTTTCTGCTTTTTATTATAAGTTGTATTTCATACAGGTATTCAATTTATATCACCCTCCTTCATTATTTTAATATAAAGCCTTCTCCACTTTATATCAGTGGAAAACAGGCCACCTGGTGCCAGGAAAGCACATGGATTGCCATTTTAATGATGATGATGAAAAGCACTTGTTTGGGTGGTACTCACGTGCCAAACACTGTTATTTGGCTCAAAGTACCAGTTTTTTATTCTTCTCTAAATGTAGTGATAAAATAAAATAAAATTCTTAGTTAAGAAGACTTTATCTCATTCAAGTATGTATTATGAAATTTTGTTGACACTTAAGTGTCTCTGACTTACCTAGAATATTGAAATTTTTCATGAATTCAATTTGAACACTGTAAAGAAACTTTTTTTTACTAAAAGCCTTTGTGAGGCAGAATAAGATTTATGAAATGTCTTTATAATATGGAAAAATGTGTTAATGATGTTTGTAGTAATCCCTCTGAACACAGCATTCTCAATTCCCGGTATTCACCCTGAGTTACTCAGGGGAAAT	CTGTATC	20	PASS	ClusterIDs=HG3_PB_pbsv_7987:HG2_Ill_SpiralSDKrefine_15893:HG2_Ill_tnscope_951:HG4_PB_assemblyticsfalcon_24337:HG4_PB_SVrefine2PBcRDovetail_4078:HG4_PB_SVrefine2Falcon1Dovetail_4999:HG4_Ill_manta_2017:HG4_Ill_SVrefine2DISCOVARDovetail_5976:HG3_PB_SVrefine2PBcRDovetail_3767:HG3_Ill_manta_1922:HG3_Ill_SVrefine2DISCOVARDovetail_6189:HG2_PB_SVrefine2Falcon1plusDovetail_11087:HG2_Ill_manta_2350:HG2_10X_SVrefine210Xhap12_5852:HG4_Ill_Spiral_675:HG3_Ill_Spiral_8837:HG2_Ill_Spiral_584:HG2_PB_assemblyticsfalcon_24883:HG4_PB_pbsv_8225:HG4_Ill_Krunchall_11903:HG3_Ill_Krunchall_11300:HG2_Ill_Krunchall_11583:HG4_Ill_MetaSV_4938:HG4_10X_allpass_1622:HG3_Ill_MetaSV_4895:HG3_10X_allpass_1662:HG2_Ill_MetaSV_4721:HG2_10X_allpass_1386:HG2_Ill_Krunchall_11582:HG2_PB_pbsv_8200;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5852:HG2_Ill_manta_2350:HG2_PB_SVrefine2Falcon1plusDovetail_11087:HG3_Ill_SVrefine2DISCOVARDovetail_6189:HG3_Ill_manta_1922:HG3_PB_SVrefine2PBcRDovetail_3767:HG4_Ill_SVrefine2DISCOVARDovetail_5976:HG4_Ill_manta_2017:HG4_PB_SVrefine2Falcon1Dovetail_4999:HG4_PB_SVrefine2PBcRDovetail_4078:HG4_PB_assemblyticsfalcon_24337;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0168324;ClusterMaxSizeDiff=0.0168324;ClusterMaxEditDist=0.0183627;PBcalls=9;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-651;DistBack=-31;DistForward=-625;DistMin=-625;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=7:64413377-64414034;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.9954;PctRecOverlap=0.9954;SizeDiff=-3;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3708.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:22:0|1:21:3:4:16:./.:0:0:0:0:0/1:59:15:0/1:58:14:.:.:.
chr7	64748022	HG3_PB_SVrefine2PBcRDovetail_3771	AACCAGAAAGAAATTCAATCCCTGAATTGACCAATAACGTGTTCTGAAATTGAAGCTGTAATAAATAGCCTGCCAACCAAAAAAAAAAAAAAAAACAAAACAAAAAACCCAGGACCAGATAGATTATTCACAGTGGAATTCTACCAGAGGTACAAAGGAGAGCTGGTACCATTTCTACTGAAACCATTCAAAATAAAATGAAAAACAGGGACTCCTCCCCAACTCATTTTATGAGGCCAGCATCATCCTAATACCAAAACCTGGCGACATACAACAAAAAATGAAAGTTCCAGGTCAATATTCTTGATGAACATTGATGTAAAAATTCCCAATAAAATACTGGCAAACCAAATCCAGCAACACATCAAAATGCTTATCC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_5989:HG3_PB_HySA_12493:HG2_PB_HySA_15020:HG4_Ill_MetaSV_4941:HG2_Ill_tnscope_952:HG4_Ill_manta_2018:HG4_PB_pbsv_8235:HG2_PB_pbsv_8210:HG3_PB_pbsv_7995:HG4_Ill_Krunchall_11907:HG2_Ill_SpiralSDKrefine_15895:HG4_PB_SVrefine2PBcRDovetail_4081:HG3_PB_SVrefine2PBcRDovetail_3771:HG3_PB_SVrefine2Falcon1Dovetail_4966:HG2_PB_SVrefine2PBcRplusDovetail_10290;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5989:HG4_PB_SVrefine2PBcRDovetail_4081:HG3_PB_SVrefine2PBcRDovetail_3771:HG3_PB_SVrefine2Falcon1Dovetail_4966:HG2_PB_SVrefine2PBcRplusDovetail_10290;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0132802;ClusterMaxSizeDiff=0.0132802;ClusterMaxEditDist=0.0686922;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-378;DistBack=4263;DistForward=-123;DistMin=-123;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=379;REFWIDENED=7:64748023-64748779;PctSeqSimilarity=0.951;PctSizeSimilarity=0.9894;PctRecOverlap=0.4591;SizeDiff=4;StartDistance=-205;EndDistance=-201;GTMatch=0;TruScore=79;MatchId=3709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:27:0|1:20:5:2:21:./.:0:0:0:0:0/0:38:0:0/1:27:5:.:.:.
chr7	68129065	HG2_10X_allpass_1389	ATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCACAAGGTCAGGAAATCAAGACCATCCTGGCCAACGTGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTAGGCGCGACGGCATGTGCCTGTAG	A	20	PASS	ClusterIDs=HG4_PB_HySA_12149:HG4_PB_pbsv_8259:HG4_Ill_Krunchall_11955:HG3_Ill_Krunchall_11353:HG2_Ill_Krunchall_11634:HG2_PB_HySA_15075:HG4_Ill_scalpel_7825:HG4_Ill_manta_2026:HG4_Ill_MetaSV_4950:HG4_Ill_GATKHCSBGrefine_5759:HG4_10X_allpass_1627:HG3_PB_pbsv_8022:HG3_Ill_MetaSV_4906:HG3_Ill_GATKHCSBGrefine_5582:HG3_10X_allpass_1666:HG2_PB_pbsv_8232:HG2_PB_SVrefine2PBcRplusDovetail_10306:HG2_PB_SVrefine2PB10Xhap12_6003:HG2_PB_SVrefine2Falcon2Bionano_3982:HG2_PB_SVrefine2Falcon1plusDovetail_11099:HG2_Ill_scalpel_7997:HG2_Ill_manta_2361:HG2_Ill_SVrefine2DISCOVARplusDovetail_12116:HG2_Ill_MetaSV_4730:HG2_Ill_GATKHC_13533:HG2_Ill_GATKHCSBGrefine_5666:HG2_Ill_250bpfermikitraw_11321:HG2_Ill_150bpfermikitraw_10654:HG2_CG_vcfBeta_4840:HG2_10X_allpass_1389:HG2_10X_SVrefine210Xhap12_5877:HG4_Ill_Spiral_678:HG2_PB_assemblyticsfalcon_24922:HG2_PB_assemblyticsPBcR_24146:HG3_PB_SVrefine2Falcon1Dovetail_4984;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5877:HG2_10X_allpass_1389:HG2_CG_vcfBeta_4840:HG2_Ill_150bpfermikitraw_10654:HG2_Ill_250bpfermikitraw_11321:HG2_Ill_GATKHCSBGrefine_5666:HG2_Ill_GATKHC_13533:HG2_Ill_MetaSV_4730:HG2_Ill_SVrefine2DISCOVARplusDovetail_12116:HG2_Ill_manta_2361:HG2_Ill_scalpel_7997:HG2_PB_SVrefine2Falcon1plusDovetail_11099:HG2_PB_SVrefine2Falcon2Bionano_3982:HG2_PB_SVrefine2PB10Xhap12_6003:HG2_PB_SVrefine2PBcRplusDovetail_10306:HG2_PB_pbsv_8232:HG3_10X_allpass_1666:HG3_Ill_GATKHCSBGrefine_5582:HG3_Ill_MetaSV_4906:HG3_PB_pbsv_8022:HG4_10X_allpass_1627:HG4_Ill_GATKHCSBGrefine_5759:HG4_Ill_MetaSV_4950:HG4_Ill_manta_2026:HG4_Ill_scalpel_7825;NumExactMatchSVs=25;ClusterMaxShiftDist=0.109375;ClusterMaxSizeDiff=0.109375;ClusterMaxEditDist=0.125984;PBcalls=12;Illcalls=18;TenXcalls=4;CGcalls=1;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=1;HG2count=20;HG3count=6;HG4count=9;NumTechs=4;NumTechsExact=4;SVLEN=-133;DistBack=84522;DistForward=-109;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=34;REFWIDENED=7:68129056-68129222;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3710.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:59:1/1:3:19:1:13:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr7	68462070	HG4_10X_allpass_1628	TAAAAAGAAACCCAGGCCGGGCGCGGTGGCTCACGCCTCTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1193:HG4_PB_pbsv_8262:HG4_Ill_Krunchall_11959:HG2_PB_HySA_15082:HG4_PB_assemblyticsfalcon_24373:HG2_PB_assemblyticsfalcon_24928:HG2_PB_assemblyticsPBcR_24153:HG3_PB_pbsv_8027:HG3_Ill_Krunchall_11358:HG2_Ill_Krunchall_11639:HG4_Ill_MetaSV_4951:HG3_Ill_MetaSV_4907:HG2_Ill_tnscope_954:HG2_Ill_MetaSV_4731:HG4_PB_SVrefine2PBcRDovetail_4097:HG4_PB_SVrefine2Falcon1Dovetail_5013:HG4_Ill_scalpel_7826:HG4_Ill_manta_2027:HG4_Ill_SVrefine2DISCOVARDovetail_5998:HG4_Ill_GATKHCSBGrefine_5761:HG4_10X_allpass_1628:HG3_PB_assemblyticsfalcon_24789:HG3_PB_SVrefine2Falcon1Dovetail_4987:HG3_PB_HySA_12558:HG3_Ill_scalpel_8105:HG3_Ill_manta_1932:HG3_Ill_SVrefine2DISCOVARDovetail_6218:HG3_Ill_GATKHCSBGrefine_5585:HG3_10X_allpass_1667:HG2_PB_pbsv_8236:HG2_PB_SVrefine2PBcRplusDovetail_10309:HG2_PB_SVrefine2PB10Xhap12_6006:HG2_PB_SVrefine2Falcon2Bionano_3985:HG2_PB_SVrefine2Falcon1plusDovetail_11102:HG2_Ill_scalpel_7999:HG2_Ill_manta_2363:HG2_Ill_SVrefine2DISCOVARplusDovetail_12120:HG2_Ill_GATKHCSBGrefine_5670:HG2_10X_allpass_1390:HG2_10X_SVrefine210Xhap12_5880;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5880:HG2_10X_allpass_1390:HG2_Ill_GATKHCSBGrefine_5670:HG2_Ill_SVrefine2DISCOVARplusDovetail_12120:HG2_Ill_manta_2363:HG2_Ill_scalpel_7999:HG2_PB_SVrefine2Falcon1plusDovetail_11102:HG2_PB_SVrefine2Falcon2Bionano_3985:HG2_PB_SVrefine2PB10Xhap12_6006:HG2_PB_SVrefine2PBcRplusDovetail_10309:HG2_PB_pbsv_8236:HG3_10X_allpass_1667:HG3_Ill_GATKHCSBGrefine_5585:HG3_Ill_SVrefine2DISCOVARDovetail_6218:HG3_Ill_manta_1932:HG3_Ill_scalpel_8105:HG3_PB_HySA_12558:HG3_PB_SVrefine2Falcon1Dovetail_4987:HG3_PB_assemblyticsfalcon_24789:HG4_10X_allpass_1628:HG4_Ill_GATKHCSBGrefine_5761:HG4_Ill_SVrefine2DISCOVARDovetail_5998:HG4_Ill_manta_2027:HG4_Ill_scalpel_7826:HG4_PB_SVrefine2Falcon1Dovetail_5013:HG4_PB_SVrefine2PBcRDovetail_4097;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0794913;ClusterMaxSizeDiff=0.0794913;ClusterMaxEditDist=0.0794913;PBcalls=16;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=7741;DistForward=29859;DistMin=7741;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=7:68462071-68462402;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3711.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:65:1/1:1:37:1:23:./.:0:0:0:0:1/1:0:17:./.:2:12:.:.:.
chr7	69961993	HG3_Ill_150bpfermikitraw_10752	ACAGTCAGACACACACACACACCCCACACATGCACACATCACATCAGCGTCGATCACACATCCCACTCACACACACCACGTACACAGT	A	20	PASS	ClusterIDs=HG3_PB_HySA_12571:HG3_Ill_svaba_10601:HG3_Ill_150bpfermikitraw_10752:HG2_PB_pbsv_8239:HG3_PB_pbsv_8031:HG3_Ill_GATKHC_13533;NumClusterSVs=6;ExactMatchIDs=HG3_Ill_150bpfermikitraw_10752:HG3_Ill_svaba_10601;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0705882;ClusterMaxSizeDiff=0.0705882;ClusterMaxEditDist=0.0941176;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-87;DistBack=11;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=7:69961992-69962084;PctSeqSimilarity=0.9796;PctSizeSimilarity=0.954;PctRecOverlap=0.4318;SizeDiff=4;StartDistance=46;EndDistance=50;GTMatch=0;TruScore=78;MatchId=3712.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:20:./.:28:4:15:16:./.:0:0:0:0:./.:3:0:./.:.:.:.:.:.
chr7	70353223	HG2_Ill_GATKHCSBGrefine_5676	GAGAGGGAGGAGGAAAAGAGAGAGAGAGGAAAAGGAGGGAAAGAGAGGGAGAA	G	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_24394:HG3_PB_pbsv_8034:HG2_PB_assemblyticsfalcon_24950:HG2_PB_HySA_15105:HG4_PB_pbsv_8270:HG4_Ill_Krunchall_11982:HG4_Ill_GATKHCSBGrefine_5767:HG4_Ill_250bpfermikitraw_11352:HG3_Ill_Krunchall_11380:HG3_Ill_GATKHCSBGrefine_5589:HG3_Ill_250bpfermikitraw_11045:HG2_PB_pbsv_8243:HG2_PB_assemblyticsPBcR_24172:HG2_Ill_GATKHCSBGrefine_5676:HG2_Ill_250bpfermikitraw_11348;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11348:HG2_Ill_GATKHCSBGrefine_5676:HG2_PB_assemblyticsPBcR_24172:HG2_PB_pbsv_8243:HG3_Ill_250bpfermikitraw_11045:HG3_Ill_GATKHCSBGrefine_5589:HG3_Ill_Krunchall_11380:HG4_Ill_250bpfermikitraw_11352:HG4_Ill_GATKHCSBGrefine_5767:HG4_Ill_Krunchall_11982:HG4_PB_pbsv_8270;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0380952;PBcalls=7;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=15919;DistForward=94;DistMin=94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=25;REFWIDENED=7:70353222-70353301;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3713.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:39:1/1:2:21:2:16:./.:0:0:0:0:1/1:0:19:./.:.:.:.:.:.
chr7	70447678	HG2_Ill_SVrefine2DISCOVARplusDovetail_12131	TTTTTATGGGTTGGTATTATTATTTTATGAGTTGGTATTATTTTATGGGTTGGTATTATTATTTTATGAGTTGGTATTATTTTATGGGTTGGTATTATTATTTTATGAGTTGGTATTATTTTATGGGTTGGTATTATTATTTTATGGGTTGGTATTATTTTATGGGTTGGTATTATTATTTTATGGGTTGGTATTATTTTATGGGTTGGTATTATTATTTTATGGGTTGGTATTA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12131:HG3_Ill_Krunchall_11381:HG2_Ill_Krunchall_11658:HG4_Ill_GATKHCSBGrefine_5768:HG3_Ill_GATKHCSBGrefine_5590:HG2_Ill_GATKHCSBGrefine_5677:HG4_Ill_svaba_10634:HG4_Ill_150bpfermikitraw_10881:HG3_Ill_svaba_10608:HG2_Ill_svaba_10510:HG2_PB_pbsv_8244:HG3_PB_pbsv_8035:HG4_PB_pbsv_8271:HG2_10X_SVrefine210Xhap12_5883:HG4_PB_SVrefine2PBcRDovetail_4099:HG4_PB_SVrefine2Falcon1Dovetail_5018:HG4_Ill_SVrefine2DISCOVARDovetail_6007:HG3_PB_SVrefine2Falcon1Dovetail_4992:HG3_Ill_SVrefine2DISCOVARDovetail_6227:HG2_PB_SVrefine2PBcRplusDovetail_10311:HG2_PB_SVrefine2PB10Xhap12_6011:HG2_PB_SVrefine2Falcon2Bionano_3990:HG2_PB_SVrefine2Falcon1plusDovetail_11107;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12131:HG4_PB_SVrefine2PBcRDovetail_4099:HG4_PB_SVrefine2Falcon1Dovetail_5018:HG4_Ill_SVrefine2DISCOVARDovetail_6007:HG3_PB_SVrefine2Falcon1Dovetail_4992:HG3_Ill_SVrefine2DISCOVARDovetail_6227:HG2_PB_SVrefine2PBcRplusDovetail_10311:HG2_PB_SVrefine2PB10Xhap12_6011:HG2_PB_SVrefine2Falcon2Bionano_3990:HG2_PB_SVrefine2Falcon1plusDovetail_11107;NumExactMatchSVs=10;ClusterMaxShiftDist=0.192;ClusterMaxSizeDiff=0.192;ClusterMaxEditDist=0.192;PBcalls=10;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-234;DistBack=9021;DistForward=-40;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=135;REFWIDENED=7:70447679-70448047;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.9957;PctRecOverlap=0.6653;SizeDiff=-1;StartDistance=-78;EndDistance=-79;GTMatch=0;TruScore=88;MatchId=3714.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:./.:0:1:0:3:./.:0:0:0:0:0/1:7:14:./.:.:.:.:.:.
chr7	71211898	HG2_PB_SVrefine2PBcRplusDovetail_10316	GAAAAAAAAAAAAAAAAAGAACCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATCGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACTGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACATTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAATAAAAAAAAAATAATAAAAAAAAAAAGAAAAAGTTAAAGAAACTACAATCACTTAGTCTGAAAAACAATGAATAGTTTTAACATGAATCTTTAAGAAGCTAAAACACAGTGACATACTAAGTAGCTGGTATCCATTTTTGAGAGTCAAGAGTGAAAAACGGGAAACTGAGACTGTCATTTTCAATAACTAACTTTGGGAACATCTGCTGCTATCACAGAGGGAAAGTCATTGAGAATTCTGAGTAAAGATCAAAATCAGAATACCATTCTCTCTCTCCTGCCCTTGATGACTTTTATGTAATATATTCCCAGTGAGCTATTGTAGGCTGAGATTGACAGGAATCAGCCAGAAGATGGATTAACAACAGATAAACAGGTTGACTGAAATGTAAATAGATGAAGATTAATGCAGTGGAGAGCATGAACAACATGCAGGAAGAGATAAGACTCAAAATAAGTAAATTGTAATTTTAAAAATTTCGCATGCTGCAACAATTGTCTGAAATAATAAAAATCTGGGAGACCTGGCA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_8276:HG2_10X_allpass_1391:HG4_10X_allpass_1630:HG2_PB_HySA_15117:HG2_Ill_tnscope_957:HG4_Ill_MetaSV_4955:HG2_PB_pbsv_8249:HG2_PB_SVrefine2PBcRplusDovetail_10316:HG2_PB_SVrefine2PB10Xhap12_6018:HG2_PB_SVrefine2Falcon2Bionano_3995:HG2_PB_SVrefine2Falcon1plusDovetail_11113:HG2_Ill_breakscan11_1194:HG2_Ill_MetaSV_4734:HG2_Ill_GATKHCSBGrefine_5684:HG2_10X_SVrefine210Xhap12_5889;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5889:HG2_Ill_GATKHCSBGrefine_5684:HG2_Ill_MetaSV_4734:HG2_Ill_breakscan11_1194:HG2_PB_SVrefine2Falcon1plusDovetail_11113:HG2_PB_SVrefine2Falcon2Bionano_3995:HG2_PB_SVrefine2PB10Xhap12_6018:HG2_PB_SVrefine2PBcRplusDovetail_10316:HG2_PB_pbsv_8249:HG4_Ill_MetaSV_4955;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0342857;ClusterMaxSizeDiff=0.0342857;ClusterMaxEditDist=0.0342857;PBcalls=7;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-1057;DistBack=-188;DistForward=-1030;DistMin=-1030;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=7:71211899-71212975;PctSeqSimilarity=0.9995;PctSizeSimilarity=0.9991;PctRecOverlap=0.9991;SizeDiff=1;StartDistance=0;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3715.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:30:0|1:28:0:0:28:./.:0:0:0:0:0/1:41:7:0/1:91:40:.:.:.
chr7	73190196	HG3_Ill_scalpel_8143	CAAGAAATTGAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5899:HG2_10X_allpass_1392:HG2_PB_pbsv_8260:HG4_Ill_Krunchall_12015:HG3_PB_pbsv_8051:HG3_Ill_Krunchall_11407:HG4_PB_assemblyticsfalcon_24419:HG2_PB_assemblyticsPBcR_24207:HG3_PB_assemblyticsfalcon_24832:HG2_PB_assemblyticsfalcon_24980:HG2_PB_HySA_15149:HG4_Ill_MetaSV_4957:HG3_PB_HySA_12610:HG3_Ill_MetaSV_4912:HG2_Ill_tnscope_958:HG2_Ill_MetaSV_4738:HG4_PB_pbsv_8286:HG4_Ill_scalpel_7869:HG4_Ill_SVrefine2DISCOVARDovetail_6025:HG4_Ill_GATKHCSBGrefine_5782:HG4_10X_allpass_1631:HG3_PB_SVrefine2Falcon1Dovetail_5003:HG3_Ill_scalpel_8143:HG3_Ill_GATKHCSBGrefine_5603:HG3_10X_allpass_1669:HG2_PB_SVrefine2PBcRplusDovetail_10321:HG2_PB_SVrefine2PB10Xhap12_6024:HG2_PB_SVrefine2Falcon2Bionano_4002:HG2_PB_SVrefine2Falcon1plusDovetail_11123:HG2_PB_HySA_15148:HG2_Ill_scalpel_8040:HG2_Ill_manta_2369:HG2_Ill_GATKHCSBGrefine_5690;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5899:HG4_PB_pbsv_8286:HG4_Ill_scalpel_7869:HG4_Ill_SVrefine2DISCOVARDovetail_6025:HG4_Ill_GATKHCSBGrefine_5782:HG4_10X_allpass_1631:HG3_PB_SVrefine2Falcon1Dovetail_5003:HG3_Ill_scalpel_8143:HG3_Ill_GATKHCSBGrefine_5603:HG3_10X_allpass_1669:HG2_PB_SVrefine2PBcRplusDovetail_10321:HG2_PB_SVrefine2PB10Xhap12_6024:HG2_PB_SVrefine2Falcon2Bionano_4002:HG2_PB_SVrefine2Falcon1plusDovetail_11123:HG2_PB_HySA_15148:HG2_Ill_scalpel_8040:HG2_Ill_manta_2369:HG2_Ill_GATKHCSBGrefine_5690;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0544413;ClusterMaxSizeDiff=0.0544413;ClusterMaxEditDist=0.0544413;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-352;DistBack=50156;DistForward=3453;DistMin=3453;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=180;REFWIDENED=7:73190197-73190728;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3716.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:26:0:36:./.:0:0:0:0:1/1:0:59:0/1:3:13:.:.:.
chr7	73549758	HG3_10X_allpass_1670	ATTTTGAGATGGAGTCCCGCTCTGTCGCCCAGGCTGGAGTGCAATGGCGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACTATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTGGAGACAAGGTTTCACCGTGTTAACCATGATAGTTTCCATCTCCTGACCTCGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCGGCCCCAAGAAATAATTTTTTTAAAAGCTGGGGTTTCCAAAAACCCTCTCCTGGAGTTAGATAATTTTCTAGAATGGCTCACAGAGCTCAGGGAAATACTTTACTTATGTTAAGTAATTTTTTTTTTATTTTTTATTTTTTGAGACTCACTCTGTCGCCAGGCTGGAGTACAGTGGCGCAATCCCAGCTCACTGCAACCTCCACTTCCTGGGATCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCAGGCCACCACGTCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTGGCCAGGATGGTCTCGATCTCTTGACCTTGTGATCACTCGCCTCAGCCTCTCAAAGTGCTGGGACTGATTACAGGCATGAGCCACTGCACCCGCTGCAACTAGTTTATTATATTCAAATTTTTTTACTTAAATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCCGTCCCCCAGGCTGGAGTACAGTGATACAATCTCGGCTCACTGCAACCTCCGCCTCCAAGGTTCATGCCATTCTCCTGCCTCACCCTCCCGAGTGGCTGGGACTGCAGGCGCGTGCCACCACGCCCGGCTAATTTTTTGTATTTTCAGTAGAGACGGAGTTTCACTGTGTTAGCCAGGATGGTCTCAATCTCCCAATTCCATGATCCGCCCACCTGGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACACCTGGCCTTTTTTACTTAATTTTTAAAATAGGGATGGAATCTTGCTATCTTGCCCAGGCTGGTCTTGAATTCCTGGGCTCAAGTGATTCTCTCACCTCAGCCTCACCCTCTGTAGTAGCTCGAACTACAGGTGCACACCACCACATGCAGCTAAGTTTTTAATTTTCCTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12146:HG4_PB_SVrefine2PBcRDovetail_4108:HG4_10X_allpass_1632:HG3_Ill_Krunchall_11413:HG3_PB_HySA_12613:HG2_PB_HySA_15160:HG2_Ill_tnscope_959:HG4_Ill_MetaSV_4961:HG4_Ill_GATKHCSBGrefine_5785:HG3_Ill_MetaSV_4915:HG3_Ill_GATKHCSBGrefine_5606:HG3_10X_allpass_1670:HG2_PB_pbsv_8263:HG2_Ill_MetaSV_4740:HG2_Ill_GATKHCSBGrefine_5693:HG2_10X_allpass_1393:HG4_PB_pbsv_8289:HG3_PB_pbsv_8056:HG3_PB_SVrefine2Falcon1Dovetail_5005:HG2_PB_SVrefine2PBcRplusDovetail_10323:HG2_PB_SVrefine2PB10Xhap12_6026:HG2_PB_SVrefine2Falcon2Bionano_4004:HG2_PB_SVrefine2Falcon1plusDovetail_11125;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_1393:HG2_Ill_GATKHCSBGrefine_5693:HG2_Ill_MetaSV_4740:HG2_PB_pbsv_8263:HG3_10X_allpass_1670:HG3_Ill_GATKHCSBGrefine_5606:HG3_Ill_MetaSV_4915:HG4_Ill_GATKHCSBGrefine_5785:HG4_Ill_MetaSV_4961;NumExactMatchSVs=9;ClusterMaxShiftDist=0.046551;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.075328;PBcalls=11;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1208;DistBack=1995;DistForward=-925;DistMin=-925;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=295;REFWIDENED=7:73549749-73551251;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3717.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:0:24:0:9:./.:0:0:0:0:1/1:0:38:./.:4:64:.:.:.
chr7	73828443	HG2_PB_SVrefine2PB10Xhap12_6030	CAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGTCAGGCAGATCGTTTGAGGTAAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAAACCTGTCTCTACTAAAAATACAAAAATTAGCCAGACTTGGTGGTGGGAACCTGTAATGCCAGCAACTCGGGAGGCTGAGGCAGGAGAATCTCTTGAACCCAGGAGGCAGAGGTTGTAGTGAGCTGAGATCGCACCATTGCACTCCAGCATGGGTGACAAAGTGAGACTCCAGCTCAAAAAAAAAAAAAAAAAAGAACTCCAAATATTATAAATAAAAAGAAATCCAGGCCAGGTACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCGGATCACCTGAGGTCCAGAGTTCGAGACCAGCCTGGCCAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAATGTGGTGGCACCACCTATACTCCCAGCTACTTGGGAGGCTGAAGCAGGAGAATCGCTTGAACCCAGGAGGTGGAAGTTGCAGTGAGCTGAGACTGTGCCACTGCACTCCAGCCTGGGTGACAGAGACAGACTCCATCTCAAAAATAAATAAATAAATAAAAATAAAAGGAAATACACATCTACGCACATTATATAAAATATAATTGGCAGAATGCCAAAGGCAAAGATCCAAGCAGGATTCACAGGGCATAGTCTTAACAGCAACTTTATTTTTCTCTCCCAATTTGTCCTTAAACCTCTCCAAGTAGGGGTTGACCTGCCCGTTACTGGAGAAAAACTTGGACAGGCCCTTCCACTTCATCATGCTCTCAAAAAGTGGGCGAGGCTGGATGCGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCAGAGGTGGAAGGATCGCTTGAGGTCAGGAGTTCAAGACCAGCCTGGGCAGCATAGCCAGACCCCAAAATCTAAAAAAAAAAAAAAGCTGGGCATGGTGCTACATGCCTGTGGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGTTCAAGGTTGCAGTGAGTTATAACCATGCCATTGCACTCCAGCCTGGGCAACAGAGCAAGACCCTGTTTCCAAAAAAAAAAAAAAAGAATCGCAAACATAGCCTCAATTCAGGACCTAAAATCTTAGGCACCCATCCACTGCCAGGGAGGGATAACAAGCTCTCCAAGGAGGCCCACCCCGCCTATGAGGCTTCAGCTGGGGGATGGCAACCCCACCCTCGCCTGGAAGGTGGGATTCGCCACACAGCTCTGTCCAAACCTGTAGTTCTCAACCGGGGATACTTGCCCCCTCGGGGACATTTAGCAATGTCTAGAGACGTTATTGGTGGTCACAACGGGGGCATGCTACCGGCATGTAGGGAACAGAGGCCAGGAATGCTGCTAAATACCCTACGATGCATAGGACAGAGCCCCGGAACAAAGAATTATCCCACCTAGAGCCTCAATAGTGTGAGGTTAAGACAGTGCCCTAAAGCAATTCTCCTCGCTCATTTTTTCTCATCACCAACAGCTGGGGCCTCCTTTTATAAATTCTGATGTAGGTGAATTGCCTAGTACCACCTTATAACTCACAGGACTGTAGATTTGTGATCAAGAGGCAGCTTCAGCCAGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGAAGGCAGAGATGGGAGGATCGCTTGAGGCCAGGAGTTTGAGACAATCCTGGACAATATAGTGAGAGTCCCATCTCTACCAAAAATATATATATATTTATATATTTTTAAATATATATATTTTTAAAATATTATATATATTTATATATTTTTAAATATTTTATATAGATATATATTTTGTTGCCCAGGCTGCAGTGCAGTGGTGCGTTCTTGGCTCACTGTAACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCAACTAATTTTTTCGTATTTTTAGTAGAGGGGGGGTTTCATCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTCTGCCTCCCAAAGTGCAAGGATTACAGGCATGAGCCACCGCGCCCAGCCTATATATATATATTTTTTTTTAACTGGCCAAGCACAGTGGCACACTCTGTAGTCCCAGCTATTCAGGAGGCTGAGGCAGAAGGATTGCTTGAGCCTGGGAGGTCGAGGTTGCAGTGAGCTATGATTGTGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACCCTGTCTCAGAAAAAAAAAAAAAAAAAAGGCAGCACCTTGCAGCAGCTGAGACCCAAGTTCCAACTCTGACTTGGGCAGTAACCAGCCTGTGGCCCTGGGCAGAGCCCTTCCCTCCCCAGCTTCAGTTTTCTCATCTATAAAGTGGTAACATAAGCCCCAGGCAGGGGTCACAGCTGAACATCTTGGGAATCATGGTTTGGGTAGGGGTTGGGGGGACATCCTTCTCTGGGTCACTCCTGGGATGTGGCCCTGGGTCCAGCTTTGGGAAAATTAAATAAAGCTTGGAGCATCAGTGTTTTGGGGGTGGGGATTGAACCAGTGTGGTCTGAAGCAGGGGGCGGGGTGTCCTCATGACCCTTCCGCCCCAAGGTTCACAGTACTGGCCTTTGGAAGGCATCTCCATGGCATGGGGTTATGGCGACAACCACTGCTGCAACCCTCCCCCTCCAACACAGTGTCTGTCTCATGTTGAGGGAAGCTCAGAAACCGGGACTTCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5902:HG4_PB_pbsv_8292:HG2_PB_assemblyticsPBcR_24217:HG4_PB_assemblyticsfalcon_24427:HG3_PB_assemblyticsfalcon_24845:HG2_PB_assemblyticsfalcon_24996:HG4_10X_allpass_1633:HG3_10X_allpass_1671:HG2_10X_allpass_1395:HG4_Ill_GATKHCSBGrefine_5787:HG3_Ill_GATKHCSBGrefine_5611:HG2_Ill_GATKHCSBGrefine_5694:HG2_PB_PB10Xdip_28976:HG2_PB_PB10Xdip_28975:HG2_Ill_Krunchall_11700:HG2_PB_pbsv_8267:HG4_Ill_MetaSV_4963:HG2_PB_HySA_15166:HG2_Ill_tnscope_960:HG4_PB_SVrefine2PBcRDovetail_4111:HG4_PB_SVrefine2Falcon1Dovetail_5029:HG4_Ill_SVrefine2DISCOVARDovetail_6028:HG3_PB_pbsv_8060:HG3_PB_SVrefine2Falcon1Dovetail_5008:HG3_Ill_MetaSV_4917:HG2_PB_SVrefine2PBcRplusDovetail_10326:HG2_PB_SVrefine2PB10Xhap12_6030:HG2_PB_SVrefine2Falcon2Bionano_4007:HG2_PB_SVrefine2Falcon1plusDovetail_11128:HG2_Ill_SVrefine2DISCOVARplusDovetail_12148:HG2_Ill_MetaSV_4743;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5902:HG4_PB_SVrefine2PBcRDovetail_4111:HG4_PB_SVrefine2Falcon1Dovetail_5029:HG4_Ill_SVrefine2DISCOVARDovetail_6028:HG3_PB_pbsv_8060:HG3_PB_SVrefine2Falcon1Dovetail_5008:HG3_Ill_MetaSV_4917:HG2_PB_SVrefine2PBcRplusDovetail_10326:HG2_PB_SVrefine2PB10Xhap12_6030:HG2_PB_SVrefine2Falcon2Bionano_4007:HG2_PB_SVrefine2Falcon1plusDovetail_11128:HG2_Ill_SVrefine2DISCOVARplusDovetail_12148:HG2_Ill_MetaSV_4743;NumExactMatchSVs=13;ClusterMaxShiftDist=0.164379;ClusterMaxSizeDiff=0.164379;ClusterMaxEditDist=0.164379;PBcalls=17;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2818;DistBack=14980;DistForward=1834;DistMin=1834;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=142;REFWIDENED=7:73828444-73831403;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3719.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:1:21:0:9:./.:0:0:0:0:1/1:0:52:1/1:4:151:2615:.:.
chr7	75313183	HG4_Ill_svaba_10687	CGAATCCTTGCTCTGCAGCCAACCAGCTACATGAATTTGAACAAGCTAAGTAGTTCTCTG	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_10721:HG4_PB_assemblyticsfalcon_24430:HG4_PB_pbsv_8297:HG3_PB_pbsv_8066:HG2_PB_pbsv_8271:HG2_PB_HySA_15184:HG4_PB_SVrefine2PBcRDovetail_4113:HG4_Ill_svaba_10687:HG4_Ill_manta_2036:HG4_Ill_Krunchall_12031:HG4_Ill_GATKHCSBGrefine_5792:HG4_Ill_250bpfermikitraw_11395:HG4_Ill_150bpfermikitraw_10931:HG3_Ill_svaba_10656:HG3_Ill_manta_1938:HG3_Ill_Krunchall_11423:HG3_Ill_GATKHCSBGrefine_5616:HG3_Ill_250bpfermikitraw_11080:HG3_Ill_150bpfermikitraw_10796:HG2_PB_SVrefine2PBcRplusDovetail_10331:HG2_PB_SVrefine2PB10Xhap12_6035:HG2_Ill_svaba_10564:HG2_Ill_manta_2371:HG2_Ill_SpiralSDKrefine_15979:HG2_Ill_GATKHCSBGrefine_5699:HG2_Ill_250bpfermikitraw_11389;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10721:HG4_PB_SVrefine2PBcRDovetail_4113:HG4_Ill_svaba_10687:HG4_Ill_manta_2036:HG4_Ill_Krunchall_12031:HG4_Ill_GATKHCSBGrefine_5792:HG4_Ill_250bpfermikitraw_11395:HG4_Ill_150bpfermikitraw_10931:HG3_Ill_svaba_10656:HG3_Ill_manta_1938:HG3_Ill_Krunchall_11423:HG3_Ill_GATKHCSBGrefine_5616:HG3_Ill_250bpfermikitraw_11080:HG3_Ill_150bpfermikitraw_10796:HG2_PB_SVrefine2PBcRplusDovetail_10331:HG2_PB_SVrefine2PB10Xhap12_6035:HG2_Ill_svaba_10564:HG2_Ill_manta_2371:HG2_Ill_SpiralSDKrefine_15979:HG2_Ill_GATKHCSBGrefine_5699:HG2_Ill_250bpfermikitraw_11389;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0338983;PBcalls=8;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=19486;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=59;REFWIDENED=7:75313184-75313301;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:0|1:25:1:1:26:./.:0:0:0:0:0/1:50:20:./.:.:.:.:.:.
chr7	75895142	HG2_Ill_GATKHCSBGrefine_5702	ATATTTATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCTATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	A	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_15982:HG3_PB_pbsv_8071:HG2_PB_pbsv_8277:HG4_PB_assemblyticsfalcon_24439:HG3_PB_assemblyticsfalcon_24856:HG3_PB_SVrefine2Falcon1Dovetail_5013:HG2_Ill_Krunchall_11712:HG3_PB_HySA_12649:HG2_PB_HySA_15189:HG4_PB_SVrefine2Falcon1Dovetail_5034:HG3_PB_SVrefine2PBcRDovetail_3781:HG3_Ill_manta_1940:HG3_Ill_GATKHCSBGrefine_5620:HG2_PB_SVrefine2Falcon1plusDovetail_11133:HG2_Ill_manta_2373:HG2_Ill_GATKHCSBGrefine_5702:HG2_PB_assemblyticsfalcon_25009:HG2_Ill_tnscope_961;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5702:HG2_Ill_manta_2373:HG2_PB_SVrefine2Falcon1plusDovetail_11133:HG3_Ill_GATKHCSBGrefine_5620:HG3_Ill_manta_1940:HG3_PB_SVrefine2PBcRDovetail_3781:HG4_PB_SVrefine2Falcon1Dovetail_5034;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0903955;ClusterMaxSizeDiff=0.0903955;ClusterMaxEditDist=0.0903955;PBcalls=11;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-344;DistBack=10707;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=51;REFWIDENED=7:75895115-75895534;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3721.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:14:0|1:39:1:1:15:./.:0:0:0:0:0/1:15:15:0/1:11:3:.:.:.
chr7	75922479	HG2_Ill_150bpfermikitraw_10729	CACCCAAGGAGGCATCTTAGAGACCCAGATGCCTGGGGGTCTCCTACCTCCCCCTCCACCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5910:HG2_PB_HySA_15190:HG3_PB_HySA_12650:HG3_PB_pbsv_8072:HG2_PB_pbsv_8278:HG3_PB_assemblyticsfalcon_24857:HG3_Ill_svaba_10661:HG3_Ill_Krunchall_11431:HG3_Ill_GATKHC_13600:HG3_Ill_GATKHCSBGrefine_5621:HG3_Ill_250bpfermikitraw_11089:HG2_Ill_svaba_10570:HG2_Ill_scalpel_8061:HG2_Ill_SpiralSDKrefine_15983:HG2_Ill_GATKHC_13628:HG2_Ill_GATKHCSBGrefine_5703:HG2_Ill_250bpfermikitraw_11400:HG2_Ill_150bpfermikitraw_10729:HG3_PB_SVrefine2PBcRDovetail_3782:HG2_PB_SVrefine2Falcon1plusDovetail_11134:HG2_Ill_SVrefine2DISCOVARplusDovetail_12155;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10729:HG2_Ill_250bpfermikitraw_11400:HG2_Ill_GATKHCSBGrefine_5703:HG2_Ill_GATKHC_13628:HG2_Ill_SpiralSDKrefine_15983:HG2_Ill_scalpel_8061:HG2_Ill_svaba_10570:HG3_Ill_250bpfermikitraw_11089:HG3_Ill_GATKHCSBGrefine_5621:HG3_Ill_GATKHC_13600:HG3_Ill_Krunchall_11431:HG3_Ill_svaba_10661;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.0645161;PBcalls=7;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-60;DistBack=9312;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=77;REFWIDENED=7:75922468-75922604;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3722.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:19:0|1:16:1:1:25:./.:0:0:0:0:0/1:26:20:./.:.:.:.:.:.
chr7	77959636	HG2_Ill_manta_2377	TAGAAAGATTCCTTCACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5923:HG3_10X_allpass_1677:HG3_PB_pbsv_8087:HG2_PB_assemblyticsfalcon_25030:HG3_PB_HySA_12681:HG3_Ill_MetaSV_4931:HG2_Ill_MetaSV_4751:HG3_Ill_manta_1943:HG3_Ill_GATKHCSBGrefine_5634:HG2_PB_pbsv_8294:HG2_PB_SVrefine2PB10Xhap12_6053:HG2_Ill_manta_2377:HG2_Ill_breakscan11_1195:HG2_Ill_SVrefine2DISCOVARplusDovetail_12162:HG2_Ill_GATKHCSBGrefine_5713:HG2_10X_allpass_1401;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5923:HG3_Ill_manta_1943:HG3_Ill_GATKHCSBGrefine_5634:HG2_PB_pbsv_8294:HG2_PB_SVrefine2PB10Xhap12_6053:HG2_Ill_manta_2377:HG2_Ill_breakscan11_1195:HG2_Ill_SVrefine2DISCOVARplusDovetail_12162:HG2_Ill_GATKHCSBGrefine_5713:HG2_10X_allpass_1401;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0976378;ClusterMaxSizeDiff=0.0976378;ClusterMaxEditDist=0.0976378;PBcalls=5;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=1788;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=7:77959637-77959976;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3723.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:39:0|1:52:1:2:43:./.:0:0:0:0:0/1:32:30:0/1:22:11:.:.:.
chr7	79742076	HG3_Ill_GATKHCSBGrefine_5643	TCAATCCCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5930:HG3_PB_HySA_12695:HG2_10X_allpass_1402:HG2_PB_assemblyticsfalcon_25043:HG4_PB_assemblyticsfalcon_24472:HG3_PB_assemblyticsfalcon_24889:HG2_PB_assemblyticsPBcR_24266:HG4_Ill_Spiral_681:HG3_Ill_Spiral_8965:HG2_Ill_Spiral_587:HG4_PB_pbsv_8329:HG3_PB_pbsv_8098:HG4_Ill_MetaSV_4973:HG3_Ill_MetaSV_4933:HG2_Ill_tnscope_963:HG2_Ill_MetaSV_4752:HG4_PB_SVrefine2Falcon1Dovetail_5053:HG4_PB_HySA_12269:HG4_Ill_manta_2045:HG4_Ill_SVrefine2DISCOVARDovetail_6054:HG4_Ill_GATKHCSBGrefine_5809:HG4_10X_allpass_1639:HG3_PB_SVrefine2Falcon1Dovetail_5031:HG3_Ill_scalpel_8195:HG3_Ill_manta_1949:HG3_Ill_GATKHCSBGrefine_5643:HG3_10X_allpass_1680:HG2_PB_pbsv_8304:HG2_PB_SVrefine2PB10Xhap12_6056:HG2_PB_SVrefine2Falcon2Bionano_4022:HG2_Ill_scalpel_8087:HG2_Ill_manta_2381:HG2_Ill_breakscan11_1196:HG2_Ill_SpiralSDKrefine_16016:HG2_Ill_SVrefine2DISCOVARplusDovetail_12174:HG2_Ill_GATKHCSBGrefine_5720;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5930:HG4_PB_SVrefine2Falcon1Dovetail_5053:HG4_PB_HySA_12269:HG4_Ill_manta_2045:HG4_Ill_SVrefine2DISCOVARDovetail_6054:HG4_Ill_GATKHCSBGrefine_5809:HG4_10X_allpass_1639:HG3_PB_SVrefine2Falcon1Dovetail_5031:HG3_Ill_scalpel_8195:HG3_Ill_manta_1949:HG3_Ill_GATKHCSBGrefine_5643:HG3_10X_allpass_1680:HG2_PB_pbsv_8304:HG2_PB_SVrefine2PB10Xhap12_6056:HG2_PB_SVrefine2Falcon2Bionano_4022:HG2_Ill_scalpel_8087:HG2_Ill_manta_2381:HG2_Ill_breakscan11_1196:HG2_Ill_SpiralSDKrefine_16016:HG2_Ill_SVrefine2DISCOVARplusDovetail_12174:HG2_Ill_GATKHCSBGrefine_5720;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0826953;ClusterMaxSizeDiff=0.0826953;ClusterMaxEditDist=0.0826953;PBcalls=13;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=651;DistForward=24183;DistMin=651;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:79742077-79742422;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3724.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:1/1:0:22:0:24:./.:0:0:0:0:1/1:0:18:./.:1:9:.:.:.
chr7	80801689	HG2_Ill_GATKHCSBGrefine_5728	TAAGAAACTGGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_12717:HG3_PB_assemblyticsfalcon_24907:HG2_PB_assemblyticsfalcon_25055:HG4_PB_assemblyticsfalcon_24493:HG2_PB_assemblyticsPBcR_24278:HG4_PB_HySA_12280:HG4_PB_pbsv_8336:HG2_Ill_breakscan11_1198:HG4_10X_allpass_1640:HG2_PB_HySA_15254:HG2_Ill_tnscope_964:HG4_PB_SVrefine2Falcon1Dovetail_5058:HG4_Ill_svaba_10733:HG4_Ill_SVrefine2DISCOVARDovetail_6059:HG4_Ill_MetaSV_4975:HG4_Ill_GATKHCSBGrefine_5816:HG3_PB_SVrefine2Falcon1Dovetail_5034:HG3_Ill_svaba_10714:HG3_Ill_manta_1952:HG3_Ill_GATKHCSBGrefine_5650:HG2_PB_pbsv_8310:HG2_PB_SVrefine2PB10Xhap12_6060:HG2_PB_SVrefine2Falcon2Bionano_4026:HG2_Ill_svaba_10618:HG2_Ill_manta_2383:HG2_Ill_SVrefine2DISCOVARplusDovetail_12179:HG2_Ill_GATKHCSBGrefine_5728:HG2_10X_SVrefine210Xhap12_5934:HG3_PB_pbsv_8106;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5934:HG2_Ill_GATKHCSBGrefine_5728:HG2_Ill_SVrefine2DISCOVARplusDovetail_12179:HG2_Ill_manta_2383:HG2_Ill_svaba_10618:HG2_PB_SVrefine2Falcon2Bionano_4026:HG2_PB_SVrefine2PB10Xhap12_6060:HG2_PB_pbsv_8310:HG3_Ill_GATKHCSBGrefine_5650:HG3_Ill_manta_1952:HG3_Ill_svaba_10714:HG3_PB_SVrefine2Falcon1Dovetail_5034:HG4_Ill_GATKHCSBGrefine_5816:HG4_Ill_MetaSV_4975:HG4_Ill_SVrefine2DISCOVARDovetail_6059:HG4_Ill_svaba_10733:HG4_PB_SVrefine2Falcon1Dovetail_5058;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0570571;ClusterMaxSizeDiff=0.0570571;ClusterMaxEditDist=0.0570571;PBcalls=14;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=-659;DistForward=58364;DistMin=-659;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=7:80801690-80802035;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3725.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:1:27:0:20:./.:0:0:0:0:1/1:0:67:0/1:3:10:.:.:.
chr7	81358337	HG4_10X_allpass_1641	GATACTCAAGGGCAGTTTCTTTGGCTTGAGTCATCTACACAATTGATTTGCTTCCCCACTTTTCAAAGCAAATCCAGAAACAACTGAACACATTCATTTAAGCTTTGAAAAATTATTTTATTCACAGATCTTTAAGGCTAATAACTCTTCAGTGGTAGGCCTTTTCTTTCCATTCTTTCGAAAGGAAAAATGTGTAATCCTCCCAAAGCTAATACGAAAATTTAAGAAGGCAGTATTTTGAAACATGCCTGGCTGCCATGACTATTAACTGATTT	G	20	PASS	ClusterIDs=HG3_PB_pbsv_8108:HG4_PB_pbsv_8338:HG4_PB_HySA_12285:HG3_PB_HySA_12721:HG3_Ill_Krunchall_11498:HG4_PB_assemblyticsfalcon_24499:HG3_PB_assemblyticsfalcon_24914:HG2_PB_assemblyticsPBcR_24283:HG4_Ill_MetaSV_4977:HG3_Ill_MetaSV_4937:HG2_PB_HySA_15258:HG4_Ill_svaba_10737:HG4_Ill_scalpel_7919:HG4_Ill_manta_2049:HG4_Ill_GATKHCSBGrefine_5818:HG4_Ill_Cortex_3458:HG4_10X_allpass_1641:HG3_Ill_svaba_10718:HG3_Ill_manta_1953:HG3_Ill_GATKHCSBGrefine_5652:HG3_Ill_Cortex_3482:HG2_PB_pbsv_8312:HG2_PB_SVrefine2PB10Xhap12_6063:HG2_Ill_svaba_10621:HG2_Ill_manta_2384:HG2_Ill_breakscan11_1199:HG2_Ill_SpiralSDKrefine_16032:HG2_Ill_MetaSV_4755:HG2_Ill_GATKHCSBGrefine_5730:HG2_Ill_Cortex_8410:HG4_Ill_Krunchall_12091:HG2_Ill_Krunchall_11772:HG2_PB_assemblyticsfalcon_25059:HG4_PB_SVrefine2Falcon1Dovetail_5060:HG4_Ill_SVrefine2DISCOVARDovetail_6063:HG3_PB_SVrefine2Falcon1Dovetail_5036:HG2_PB_SVrefine2PB10Xhap12_6062:HG2_PB_SVrefine2Falcon2Bionano_4027:HG2_10X_SVrefine210Xhap12_5938;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_Cortex_8410:HG2_Ill_GATKHCSBGrefine_5730:HG2_Ill_MetaSV_4755:HG2_Ill_SpiralSDKrefine_16032:HG2_Ill_breakscan11_1199:HG2_Ill_manta_2384:HG2_Ill_svaba_10621:HG2_PB_SVrefine2PB10Xhap12_6063:HG2_PB_pbsv_8312:HG3_Ill_Cortex_3482:HG3_Ill_GATKHCSBGrefine_5652:HG3_Ill_manta_1953:HG3_Ill_svaba_10718:HG4_10X_allpass_1641:HG4_Ill_Cortex_3458:HG4_Ill_GATKHCSBGrefine_5818:HG4_Ill_manta_2049:HG4_Ill_scalpel_7919:HG4_Ill_svaba_10737;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0330275;ClusterMaxSizeDiff=0.0330275;ClusterMaxEditDist=0.0330275;PBcalls=15;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-274;DistBack=20496;DistForward=43901;DistMin=20496;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:81358338-81358612;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3726.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:34:0|1:23:0:0:40:./.:0:0:0:0:0/1:39:23:./.:.:.:.:.:.
chr7	81441636	HG3_10X_allpass_1682	TAGAGATATGCCAGCCCTCTGACTAAACAGTTCATATTATCTCCTGCCGCCTGGACCTATGTGAATGAGCACTGCCAGTGAAGCTGTTTCTGGAAATACCTATGGCTGAATAACTTCTTTCTAACCAACACCTTCTTTGTTACATACATTGTTACCTTCACTTAATTTTGCTGCAACCTGTGATCTATTCTGCTTCCTGAAAGGCAGATTTTTCAGACAATGGCACTAAAAAAACAAACAGTAAAACTGGAAATCAGACGTATTTTGGGTTAATTTAAGCTTCAGTGTCAAAATCACTAGGCATATTGTCTTGTATATTGGTTTTTACACTTCAATGTACAAAGGACACTGTTAATTCCAAACATTTGCATAGCCTCTCACCGTTCCTCTTCTTCTTCACGTATCACCTGCCTAGAGAATTGAGATACTTGGTTGTCTAACGGTGGGTTTGCCTGGTCCAAATGTTTCAGAAATTTTGTTAATTTATTTATATCCATTCCCTCATTCTACTCATAGGCACAAGAAGAACATATTTCAGTTATGTTAAAAAGCAAAGATTAATTTTAATAGAATATTTAAAGTGCCTAAATATCAAGAGAGCTGTTAAGTACGTTATTTTAAAAATGGAGACTAATACATGCTTTCGTTTTGTTTTGTTTTGTTTTGAGACAGGGTTTCACTCTGTCTGTCACCCAGAGCAGATTGCAAAGGTGTGATCTCAGCTCAAGGAGTGTACTAAAAATAGATTATCTAGCCACACCCTGTAGATTCTGAGTGGGGCCTAGGAATTGTATTTTAAAAGCACCTCAAACAAACCATTGACATCAGTTTTGAATTGGGGAATGACTGAAAGCTTATCCATTGTGCCAACATCACTCTAGGACAATCAAATATGCCATCTGCACTTG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5939:HG4_PB_pbsv_8339:HG4_Ill_MetaSV_4978:HG3_Ill_MetaSV_4938:HG2_Ill_MetaSV_4756:HG4_Ill_GATKHCSBGrefine_5820:HG4_10X_allpass_1643:HG3_Ill_GATKHCSBGrefine_5653:HG3_10X_allpass_1682:HG2_Ill_GATKHCSBGrefine_5732:HG2_10X_allpass_1403:HG2_PB_pbsv_8313:HG3_PB_HySA_12722:HG3_PB_pbsv_8109:HG3_PB_SVrefine2Falcon1Dovetail_5037:HG2_PB_SVrefine2PB10Xhap12_6064:HG2_PB_SVrefine2Falcon2Bionano_4028:HG2_Ill_SVrefine2DISCOVARplusDovetail_12182;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_1403:HG2_Ill_GATKHCSBGrefine_5732:HG3_10X_allpass_1682:HG3_Ill_GATKHCSBGrefine_5653:HG4_10X_allpass_1643:HG4_Ill_GATKHCSBGrefine_5820;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0142466;ClusterMaxSizeDiff=0.0142466;ClusterMaxEditDist=0.0153425;PBcalls=7;Illcalls=7;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-907;DistBack=3388;DistForward=-858;DistMin=-858;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=238;REFWIDENED=7:81441453-81442597;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3727.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:1/1:1:17:0:23:./.:0:0:0:0:1/1:0:24:./.:2:36:973:.:.
chr7	81728727	HG4_PB_pbsv_8341	AGCAATACCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5940:HG3_PB_assemblyticsfalcon_24919:HG2_PB_assemblyticsPBcR_24287:HG4_Ill_Krunchall_12097:HG4_Ill_Spiral_682:HG3_Ill_Spiral_8992:HG2_Ill_Spiral_589:HG2_PB_pbsv_8315:HG2_Ill_breakscan11_1200:HG2_PB_SVrefine2PB10Xhap12_6068:HG4_Ill_MetaSV_4979:HG3_Ill_MetaSV_4939:HG2_Ill_tnscope_965:HG4_PB_assemblyticsfalcon_24503:HG4_PB_pbsv_8341:HG4_PB_SVrefine2Falcon1Dovetail_5063:HG4_Ill_scalpel_7922:HG4_Ill_manta_2051:HG4_Ill_SVrefine2DISCOVARDovetail_6067:HG4_Ill_GATKHCSBGrefine_5822:HG4_10X_allpass_1644:HG3_PB_pbsv_8111:HG3_PB_SVrefine2Falcon1Dovetail_5039:HG3_Ill_scalpel_8215:HG3_Ill_manta_1955:HG3_Ill_GATKHCSBGrefine_5656:HG3_10X_allpass_1683:HG2_PB_SVrefine2PB10Xhap12_6067:HG2_PB_SVrefine2Falcon2Bionano_4030:HG2_PB_SVrefine2Falcon1plusDovetail_11140:HG2_Ill_scalpel_8105:HG2_Ill_manta_2386:HG2_Ill_MetaSV_4757:HG2_Ill_GATKHCSBGrefine_5733:HG2_10X_allpass_1404;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5940:HG4_PB_pbsv_8341:HG4_PB_SVrefine2Falcon1Dovetail_5063:HG4_Ill_scalpel_7922:HG4_Ill_manta_2051:HG4_Ill_SVrefine2DISCOVARDovetail_6067:HG4_Ill_GATKHCSBGrefine_5822:HG4_10X_allpass_1644:HG3_PB_pbsv_8111:HG3_PB_SVrefine2Falcon1Dovetail_5039:HG3_Ill_scalpel_8215:HG3_Ill_manta_1955:HG3_Ill_GATKHCSBGrefine_5656:HG3_10X_allpass_1683:HG2_PB_SVrefine2PB10Xhap12_6067:HG2_PB_SVrefine2Falcon2Bionano_4030:HG2_PB_SVrefine2Falcon1plusDovetail_11140:HG2_Ill_scalpel_8105:HG2_Ill_manta_2386:HG2_Ill_MetaSV_4757:HG2_Ill_GATKHCSBGrefine_5733:HG2_10X_allpass_1404;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0753012;ClusterMaxSizeDiff=0.0753012;ClusterMaxEditDist=0.0753012;PBcalls=12;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=-36;DistForward=22662;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=7:81728728-81729077;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3728.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:38:0|1:27:2:0:37:./.:0:0:0:0:0/1:17:27:0/1:26:11:.:.:.
chr7	82330932	HG2_Ill_Cortex_8413	CTAGGAAGCAGAATTAGCAGATCAAATGATTCTTAGATAACTTTAAAAAAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5942:HG2_PB_assemblyticsfalcon_25068:HG3_PB_pbsv_8113:HG3_Ill_svaba_10730:HG3_Ill_scalpel_8222:HG3_Ill_Krunchall_11508:HG3_Ill_GATKHC_13694:HG3_Ill_GATKHCSBGrefine_5658:HG3_Ill_Cortex_3484:HG3_Ill_250bpfermikitraw_11163:HG3_Ill_150bpfermikitraw_10875:HG2_PB_pbsv_8318:HG2_PB_SVrefine2PBcRplusDovetail_10343:HG2_PB_SVrefine2PB10Xhap12_6071:HG2_Ill_svaba_10633:HG2_Ill_SpiralSDKrefine_16040:HG2_Ill_SVrefine2DISCOVARplusDovetail_12187:HG2_Ill_Krunchall_11784:HG2_Ill_GATKHC_13702:HG2_Ill_GATKHCSBGrefine_5735:HG2_Ill_Cortex_8413:HG2_Ill_250bpfermikitraw_11467:HG2_Ill_150bpfermikitraw_10793;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5942:HG3_PB_pbsv_8113:HG3_Ill_svaba_10730:HG3_Ill_scalpel_8222:HG3_Ill_Krunchall_11508:HG3_Ill_GATKHC_13694:HG3_Ill_GATKHCSBGrefine_5658:HG3_Ill_Cortex_3484:HG3_Ill_250bpfermikitraw_11163:HG3_Ill_150bpfermikitraw_10875:HG2_PB_pbsv_8318:HG2_PB_SVrefine2PBcRplusDovetail_10343:HG2_PB_SVrefine2PB10Xhap12_6071:HG2_Ill_svaba_10633:HG2_Ill_SpiralSDKrefine_16040:HG2_Ill_SVrefine2DISCOVARplusDovetail_12187:HG2_Ill_Krunchall_11784:HG2_Ill_GATKHC_13702:HG2_Ill_GATKHCSBGrefine_5735:HG2_Ill_Cortex_8413:HG2_Ill_250bpfermikitraw_11467:HG2_Ill_150bpfermikitraw_10793;NumExactMatchSVs=22;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.019802;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=71068;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=52;REFWIDENED=7:82330933-82331034;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:31:1|0:9:30:14:3:./.:0:0:0:0:0/1:38:30:./.:.:.:.:.:.
chr7	82910895	HG2_PB_assemblyticsPBcR_24296	ATAGCCTCAATTTGAATCCTTTAGTCTATTATAGACTAGGCAGAGTCTCCATAAGAAATCCAAC	A	20	PASS	ClusterIDs=HG2_10X_allpass_1405:HG3_PB_pbsv_8116:HG2_PB_pbsv_8323:HG2_PB_HySA_15269:HG3_PB_assemblyticsfalcon_24927:HG3_Ill_svaba_10733:HG3_Ill_scalpel_8226:HG3_Ill_Krunchall_11511:HG3_Ill_GATKHC_13697:HG3_Ill_GATKHCSBGrefine_5660:HG3_Ill_Cortex_3486:HG3_Ill_250bpfermikitraw_11166:HG3_Ill_150bpfermikitraw_10878:HG3_CG_vcfBeta_4665:HG3_10X_allpass_1684:HG2_PB_assemblyticsPBcR_24296:HG2_Ill_svaba_10637:HG2_Ill_scalpel_8109:HG2_Ill_manta_2388:HG2_Ill_breakscan11_1201:HG2_Ill_SpiralSDKrefine_16043:HG2_Ill_Krunchall_11788:HG2_Ill_GATKHC_13707:HG2_Ill_GATKHCSBGrefine_5737:HG2_Ill_Cortex_8415:HG2_Ill_250bpfermikitraw_11471:HG2_Ill_150bpfermikitraw_10799:HG2_CG_vcfBeta_4892;NumClusterSVs=28;ExactMatchIDs=HG2_10X_allpass_1405:HG3_Ill_svaba_10733:HG3_Ill_scalpel_8226:HG3_Ill_Krunchall_11511:HG3_Ill_GATKHC_13697:HG3_Ill_GATKHCSBGrefine_5660:HG3_Ill_Cortex_3486:HG3_Ill_250bpfermikitraw_11166:HG3_Ill_150bpfermikitraw_10878:HG3_CG_vcfBeta_4665:HG3_10X_allpass_1684:HG2_PB_assemblyticsPBcR_24296:HG2_Ill_svaba_10637:HG2_Ill_scalpel_8109:HG2_Ill_manta_2388:HG2_Ill_breakscan11_1201:HG2_Ill_SpiralSDKrefine_16043:HG2_Ill_Krunchall_11788:HG2_Ill_GATKHC_13707:HG2_Ill_GATKHCSBGrefine_5737:HG2_Ill_Cortex_8415:HG2_Ill_250bpfermikitraw_11471:HG2_Ill_150bpfermikitraw_10799:HG2_CG_vcfBeta_4892;NumExactMatchSVs=24;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.0314961;PBcalls=5;Illcalls=19;TenXcalls=2;CGcalls=2;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=2;HG2count=16;HG3count=12;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-63;DistBack=22662;DistForward=35374;DistMin=22662;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:82910894-82910960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3730.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:0|1:29:5:3:24:./.:0:0:0:0:0/1:19:27:./.:.:.:.:.:.
chr7	83536468	HG2_10X_SVrefine210Xhap12_5949	AAATGTTTAGTCTTTCATCACAGATGTCAGATCTTCTGCTAAGCATGATAACATCAATGAATTCTCTT	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_24936:HG2_PB_assemblyticsPBcR_24300:HG4_PB_pbsv_8350:HG4_PB_assemblyticsfalcon_24518:HG4_PB_SVrefine2PBcRDovetail_4121:HG4_Ill_svaba_10758:HG4_Ill_manta_2057:HG4_Ill_SVrefine2DISCOVARDovetail_6075:HG4_Ill_Krunchall_12112:HG4_Ill_GATKHC_13775:HG4_Ill_GATKHCSBGrefine_5832:HG4_Ill_Cortex_3463:HG4_Ill_250bpfermikitraw_11473:HG4_Ill_150bpfermikitraw_11003:HG4_CG_vcfBeta_5478:HG4_10X_allpass_1648:HG3_PB_pbsv_8121:HG3_Ill_svaba_10743:HG3_Ill_scalpel_8227:HG3_Ill_manta_1957:HG3_Ill_Krunchall_11517:HG3_Ill_GATKHC_13708:HG3_Ill_GATKHCSBGrefine_5662:HG3_Ill_Cortex_3488:HG3_Ill_250bpfermikitraw_11176:HG3_Ill_150bpfermikitraw_10886:HG3_CG_vcfBeta_4667:HG3_10X_allpass_1686:HG2_PB_pbsv_8330:HG2_PB_assemblyticsfalcon_25077:HG2_PB_SVrefine2PBcRplusDovetail_10346:HG2_PB_SVrefine2PB10Xhap12_6076:HG2_PB_SVrefine2Falcon2Bionano_4037:HG2_Ill_svaba_10647:HG2_Ill_manta_2391:HG2_Ill_breakscan11_1203:HG2_Ill_SpiralSDKrefine_16047:HG2_Ill_SVrefine2DISCOVARplusDovetail_12192:HG2_Ill_Krunchall_11793:HG2_Ill_GATKHC_13715:HG2_Ill_GATKHCSBGrefine_5742:HG2_Ill_Cortex_8419:HG2_Ill_250bpfermikitraw_11482:HG2_Ill_150bpfermikitraw_10805:HG2_CG_vcfBeta_4893:HG2_10X_allpass_1408:HG2_10X_SVrefine210Xhap12_5949:HG4_PB_HySA_12307:HG4_Ill_Spiral_684:HG3_Ill_Spiral_9007:HG2_PB_HySA_15281;NumClusterSVs=51;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5949:HG2_10X_allpass_1408:HG2_CG_vcfBeta_4893:HG2_Ill_150bpfermikitraw_10805:HG2_Ill_250bpfermikitraw_11482:HG2_Ill_Cortex_8419:HG2_Ill_GATKHCSBGrefine_5742:HG2_Ill_GATKHC_13715:HG2_Ill_Krunchall_11793:HG2_Ill_SVrefine2DISCOVARplusDovetail_12192:HG2_Ill_SpiralSDKrefine_16047:HG2_Ill_breakscan11_1203:HG2_Ill_manta_2391:HG2_Ill_svaba_10647:HG2_PB_SVrefine2Falcon2Bionano_4037:HG2_PB_SVrefine2PB10Xhap12_6076:HG2_PB_SVrefine2PBcRplusDovetail_10346:HG2_PB_assemblyticsfalcon_25077:HG2_PB_pbsv_8330:HG3_10X_allpass_1686:HG3_CG_vcfBeta_4667:HG3_Ill_150bpfermikitraw_10886:HG3_Ill_250bpfermikitraw_11176:HG3_Ill_Cortex_3488:HG3_Ill_GATKHCSBGrefine_5662:HG3_Ill_GATKHC_13708:HG3_Ill_Krunchall_11517:HG3_Ill_manta_1957:HG3_Ill_scalpel_8227:HG3_Ill_svaba_10743:HG3_PB_pbsv_8121:HG4_10X_allpass_1648:HG4_CG_vcfBeta_5478:HG4_Ill_150bpfermikitraw_11003:HG4_Ill_250bpfermikitraw_11473:HG4_Ill_Cortex_3463:HG4_Ill_GATKHCSBGrefine_5832:HG4_Ill_GATKHC_13775:HG4_Ill_Krunchall_12112:HG4_Ill_SVrefine2DISCOVARDovetail_6075:HG4_Ill_manta_2057:HG4_Ill_svaba_10758:HG4_PB_SVrefine2PBcRDovetail_4121:HG4_PB_assemblyticsfalcon_24518:HG4_PB_pbsv_8350;NumExactMatchSVs=45;ClusterMaxShiftDist=0.106061;ClusterMaxSizeDiff=0.106061;ClusterMaxEditDist=0.106061;PBcalls=13;Illcalls=31;TenXcalls=4;CGcalls=3;PBexactcalls=9;Illexactcalls=29;TenXexactcalls=4;CGexactcalls=3;HG2count=21;HG3count=14;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-67;DistBack=69395;DistForward=112803;DistMin=69395;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=7:83536469-83536539;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3731.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:41:./.:21:10:5:29:./.:0:0:0:0:0/1:23:22:./.:.:.:.:.:.
chr7	83709861	HG4_PB_SVrefine2Falcon1Dovetail_5070	TGCAGCTTATAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_24301:HG4_Ill_Krunchall_12113:HG3_Ill_Krunchall_11518:HG4_Ill_Spiral_685:HG3_Ill_Spiral_9008:HG2_Ill_Spiral_590:HG3_PB_pbsv_8122:HG2_PB_pbsv_8331:HG4_PB_pbsv_8351:HG3_PB_HySA_12748:HG4_Ill_MetaSV_4984:HG3_Ill_MetaSV_4941:HG2_PB_HySA_15282:HG2_Ill_tnscope_966:HG2_Ill_MetaSV_4761:HG4_PB_assemblyticsfalcon_24519:HG4_PB_SVrefine2PBcRDovetail_4122:HG4_PB_SVrefine2Falcon1Dovetail_5070:HG4_Ill_scalpel_7929:HG4_Ill_manta_2058:HG4_Ill_GATKHCSBGrefine_5833:HG4_10X_allpass_1649:HG3_PB_SVrefine2Falcon1Dovetail_5047:HG3_Ill_scalpel_8228:HG3_Ill_manta_1958:HG3_Ill_GATKHCSBGrefine_5663:HG3_10X_allpass_1687:HG2_PB_assemblyticsfalcon_25078:HG2_PB_SVrefine2PBcRplusDovetail_10347:HG2_PB_SVrefine2PB10Xhap12_6077:HG2_PB_SVrefine2Falcon2Bionano_4038:HG2_Ill_scalpel_8111:HG2_Ill_manta_2392:HG2_Ill_SVrefine2DISCOVARplusDovetail_12194:HG2_Ill_GATKHCSBGrefine_5743:HG2_10X_allpass_1409:HG2_10X_SVrefine210Xhap12_5950;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5950:HG2_10X_allpass_1409:HG2_Ill_GATKHCSBGrefine_5743:HG2_Ill_SVrefine2DISCOVARplusDovetail_12194:HG2_Ill_manta_2392:HG2_Ill_scalpel_8111:HG2_PB_SVrefine2Falcon2Bionano_4038:HG2_PB_SVrefine2PB10Xhap12_6077:HG2_PB_SVrefine2PBcRplusDovetail_10347:HG2_PB_assemblyticsfalcon_25078:HG3_10X_allpass_1687:HG3_Ill_GATKHCSBGrefine_5663:HG3_Ill_manta_1958:HG3_Ill_scalpel_8228:HG3_PB_SVrefine2Falcon1Dovetail_5047:HG4_10X_allpass_1649:HG4_Ill_GATKHCSBGrefine_5833:HG4_Ill_manta_2058:HG4_Ill_scalpel_7929:HG4_PB_SVrefine2Falcon1Dovetail_5070:HG4_PB_SVrefine2PBcRDovetail_4122:HG4_PB_assemblyticsfalcon_24519;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00611621;ClusterMaxSizeDiff=0.00611621;ClusterMaxEditDist=0.00613497;PBcalls=14;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=50706;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=7:83709862-83710204;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3732.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:2:36:0:17:./.:0:0:0:0:1/1:0:29:./.:1:14:.:.:.
chr7	83750943	HG4_Ill_MetaSV_4985	TGGTTCCAAGTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_10X_allpass_1650:HG3_10X_allpass_1690:HG3_PB_HySA_12751:HG2_PB_assemblyticsfalcon_25082:HG4_PB_assemblyticsfalcon_24522:HG3_PB_assemblyticsfalcon_24938:HG2_PB_assemblyticsPBcR_24305:HG2_PB_pbsv_8336:HG3_PB_pbsv_8127:HG2_PB_HySA_15285:HG4_PB_pbsv_8355:HG4_PB_SVrefine2PBcRDovetail_4124:HG4_PB_SVrefine2Falcon1Dovetail_5073:HG4_Ill_scalpel_7930:HG4_Ill_SVrefine2DISCOVARDovetail_6076:HG4_Ill_MetaSV_4985:HG4_Ill_GATKHCSBGrefine_5841:HG3_PB_SVrefine2Falcon1Dovetail_5050:HG3_Ill_scalpel_8229:HG3_Ill_MetaSV_4942:HG3_Ill_GATKHCSBGrefine_5670:HG2_PB_SVrefine2PBcRplusDovetail_10349:HG2_PB_SVrefine2PB10Xhap12_6079:HG2_PB_SVrefine2Falcon2Bionano_4041:HG2_Ill_scalpel_8112:HG2_Ill_manta_2394:HG2_Ill_SVrefine2DISCOVARplusDovetail_12195:HG2_Ill_MetaSV_4762:HG2_Ill_GATKHCSBGrefine_5751:HG2_10X_SVrefine210Xhap12_5951;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5951:HG2_Ill_GATKHCSBGrefine_5751:HG2_Ill_MetaSV_4762:HG2_Ill_SVrefine2DISCOVARplusDovetail_12195:HG2_Ill_manta_2394:HG2_Ill_scalpel_8112:HG2_PB_SVrefine2Falcon2Bionano_4041:HG2_PB_SVrefine2PB10Xhap12_6079:HG2_PB_SVrefine2PBcRplusDovetail_10349:HG3_Ill_GATKHCSBGrefine_5670:HG3_Ill_MetaSV_4942:HG3_Ill_scalpel_8229:HG3_PB_SVrefine2Falcon1Dovetail_5050:HG4_Ill_GATKHCSBGrefine_5841:HG4_Ill_MetaSV_4985:HG4_Ill_SVrefine2DISCOVARDovetail_6076:HG4_Ill_scalpel_7930:HG4_PB_SVrefine2Falcon1Dovetail_5073:HG4_PB_SVrefine2PBcRDovetail_4124:HG4_PB_pbsv_8355;NumExactMatchSVs=20;ClusterMaxShiftDist=0.091653;ClusterMaxSizeDiff=0.091653;ClusterMaxEditDist=0.091653;PBcalls=15;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=22257;DistForward=21580;DistMin=21580;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:83750944-83751268;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:85:1/1:2:45:1:33:./.:0:0:0:0:1/1:0:33:1/1:2:24:.:.:.
chr7	84005626	HG3_Ill_manta_1964	TAAGAAGTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAACACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1204:HG2_PB_assemblyticsfalcon_25087:HG3_Ill_Krunchall_11529:HG2_Ill_Krunchall_11804:HG2_PB_assemblyticsPBcR_24310:HG3_Ill_MetaSV_4943:HG2_PB_HySA_15289:HG2_Ill_tnscope_967:HG3_PB_pbsv_8130:HG3_PB_assemblyticsfalcon_24944:HG3_PB_SVrefine2Falcon1Dovetail_5051:HG3_Ill_scalpel_8235:HG3_Ill_manta_1964:HG3_Ill_GATKHCSBGrefine_5673:HG3_10X_allpass_1691:HG2_PB_pbsv_8339:HG2_PB_SVrefine2PBcRplusDovetail_10350:HG2_PB_SVrefine2PB10Xhap12_6081:HG2_Ill_scalpel_8117:HG2_Ill_manta_2397:HG2_Ill_SVrefine2DISCOVARplusDovetail_12196:HG2_Ill_MetaSV_4763:HG2_Ill_GATKHCSBGrefine_5754:HG2_10X_allpass_1411:HG2_10X_SVrefine210Xhap12_5953;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5953:HG2_10X_allpass_1411:HG2_Ill_GATKHCSBGrefine_5754:HG2_Ill_MetaSV_4763:HG2_Ill_SVrefine2DISCOVARplusDovetail_12196:HG2_Ill_manta_2397:HG2_Ill_scalpel_8117:HG2_PB_SVrefine2PB10Xhap12_6081:HG2_PB_SVrefine2PBcRplusDovetail_10350:HG2_PB_pbsv_8339:HG3_10X_allpass_1691:HG3_Ill_GATKHCSBGrefine_5673:HG3_Ill_manta_1964:HG3_Ill_scalpel_8235:HG3_PB_SVrefine2Falcon1Dovetail_5051:HG3_PB_assemblyticsfalcon_24944:HG3_PB_pbsv_8130;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0600316;ClusterMaxSizeDiff=0.0600316;ClusterMaxEditDist=0.0600316;PBcalls=9;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=62925;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=7:84005627-84005956;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3734.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:40:0|1:31:1:1:34:./.:0:0:0:0:0/1:28:29:0/1:28:5:.:.:.
chr7	86836614	HG2_Ill_GATKHCSBGrefine_5763	CAGAAAAGCAAAAGCCGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGTTCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCCACCTGGGCCACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1205:HG2_PB_HySA_15310:HG4_PB_assemblyticsfalcon_24537:HG2_PB_assemblyticsfalcon_25103:HG4_Ill_Krunchall_12147:HG3_PB_pbsv_8136:HG3_Ill_Krunchall_11549:HG2_Ill_Krunchall_11827:HG2_PB_assemblyticsPBcR_24327:HG3_Ill_Spiral_9034:HG2_PB_pbsv_8348:HG4_PB_HySA_12326:HG3_PB_HySA_12772:HG4_PB_pbsv_8366:HG4_Ill_MetaSV_4991:HG3_Ill_MetaSV_4944:HG2_Ill_tnscope_968:HG2_Ill_MetaSV_4765:HG4_PB_SVrefine2PBcRDovetail_4128:HG4_PB_SVrefine2Falcon1Dovetail_5078:HG4_Ill_manta_2064:HG4_Ill_SVrefine2DISCOVARDovetail_6083:HG4_Ill_GATKHCSBGrefine_5854:HG4_10X_allpass_1651:HG3_PB_assemblyticsfalcon_24961:HG3_PB_SVrefine2Falcon1Dovetail_5056:HG3_Ill_manta_1966:HG3_Ill_GATKHCSBGrefine_5679:HG3_10X_allpass_1692:HG2_PB_SVrefine2PBcRplusDovetail_10355:HG2_PB_SVrefine2PB10Xhap12_6087:HG2_PB_SVrefine2Falcon2Bionano_4047:HG2_PB_SVrefine2Falcon1plusDovetail_11147:HG2_Ill_manta_2400:HG2_Ill_SVrefine2DISCOVARplusDovetail_12205:HG2_Ill_GATKHCSBGrefine_5763:HG2_10X_allpass_1412:HG2_10X_SVrefine210Xhap12_5959;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5959:HG2_10X_allpass_1412:HG2_Ill_GATKHCSBGrefine_5763:HG2_Ill_SVrefine2DISCOVARplusDovetail_12205:HG2_Ill_manta_2400:HG2_PB_SVrefine2Falcon1plusDovetail_11147:HG2_PB_SVrefine2Falcon2Bionano_4047:HG2_PB_SVrefine2PB10Xhap12_6087:HG2_PB_SVrefine2PBcRplusDovetail_10355:HG3_10X_allpass_1692:HG3_Ill_GATKHCSBGrefine_5679:HG3_Ill_manta_1966:HG3_PB_SVrefine2Falcon1Dovetail_5056:HG3_PB_assemblyticsfalcon_24961:HG4_10X_allpass_1651:HG4_Ill_GATKHCSBGrefine_5854:HG4_Ill_SVrefine2DISCOVARDovetail_6083:HG4_Ill_manta_2064:HG4_PB_SVrefine2Falcon1Dovetail_5078:HG4_PB_SVrefine2PBcRDovetail_4128;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0988468;ClusterMaxSizeDiff=0.0988468;ClusterMaxEditDist=0.0988468;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=88684;DistForward=-295;DistMin=-295;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:86836615-86836938;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3735.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:1:6:0:10:./.:0:0:0:0:1/1:0:58:0/1:2:9:.:.:.
chr7	87668512	HG2_PB_SVrefine2Falcon2Bionano_4049	CACTTTGGAGGCCAAGGGAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGACATGGTGGCACACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCGGGAGGCGGCGGTTGCAGTGAGCCGAGATTGCACCACTGCACTCCAGCCTGGGCAACAGGGCAACAGAGCGAGATTCTGTCTCAAAAAAAAAAAAAAAATATATATATATATATATATACATTTCATGTACGGTGGCTATAATCTGAACCTGATTTTGTTTCTATATCTTTCCAAATATTAAGGATTCCAAGGACAGGGACAGATAATATAATTATGGTTGAAATGTTTTTCATTCATGTTTGCATGTGTGTGTGTGTGTGTCTGTGTGTCTGTGTGTCTGTGTTTAGTATGACCAGTGGTGATTACTGTTTGGCATTTATTACGTATCTAAAAAGAGAAAGAATGAGCCACTTTTCTTTTTCTCACTATCTTGTTTCTATCTGTGTTATTCTACTGAATATACTCTCGCCACTTTACCAGTAACATACTAGTCTTCAAACTTAATGACCGTTTTTGTCCTTGGATTCTCTGTAGGTACTTGAAAAGGCTGATTCTCTCATCCTCAAAACTCTTAATAGTAATTCTTCCTTCCTTTTCTCCAGCTTCTTTTTAGCACATCTTCCCTCTCTAAATGTAGACATATCCAAGCCTGAGTCAGTGTCCTTTTCACTCTCCCACTCATCACAGTTCAACCCTATTTCTGTAGATATTTGCTAAGCCTGACCTCTTTCATGACTGTTCTCCCCACACCACCAGTTCCTATTGCATCTTTCTCAAAGGGTCAGGATTTCAGTTATCACTTCAAGATCAACACTTCCATTTTTTTTTTAATTTTATTTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGAAGTACAGTGGTACAATCTTGGCTCACTACAACCTCCATCTCTTAGGTTCAAGCTATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGAACCCGCCACCATACCCAGCTACTTTTTGCATTTTTAGTAGAGACGAGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTTAGGTGATCCACCCGCCTCAGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGCCACTGAGCCTAGCCAACACATCCATTGTTAAACTCATCAGCTTACTCCCCATCACCATCAGGTCTTCTAGATTTTCACACATCTGTAAGTGGTTCTGTCTATACTTCCCCTGTCATCCAAGTTTATTAAATATCTGTTGCAGATGATGTGGTAAAGAGAAAATTAAAATTTTATTTAGTTTTTTTTTTGTTTTGTTTTTCTATTGCTGTGTAACAAATTAACACAAACTTAGTGGCTTAAAATAACACAAATTTATTATCTCACACTTTATGTGGTTCAGGATTTTGTTTTCAGATGAGCTGGGTCTCTGCTTAGGGTGAAGTAAAGGTGTTGGCCTGTTTGCTTGTTCAGATGAGCTGGGTCTCTGCTCAGGGTGAAATAAAGGTGTTGGCTTACATCTGAGGTTTGGGGGTTTTCTCAGAGTCATTCAAGGTTGTTGGCAGAATTCAGCATTCCTTGTGGCTCGATGACTAAGGTCCCTGTTTTCTTGCTAAGAGTTGGATCAAAACCTCTCTTAGCCCCAAAAGGTCACTCTCAGATCTTGTCCAATGGCCCCTTCCATAGGCAGTTTATAATATGGCAACTGCTTTTTCCAGGCTAGCAGGAGAGCTTTTGCTATGGCTTCTGACCTGATTAAGGGCTCACAATATTAAATTAGGCCACTCAAAGTTGTCTCCCTTTTCATTAACACAAAGTCAGCTGATAAAGGACCTTAATTACATCTGTGAAAACCCCTTTGCCATGTAACATTATATGGATGGTAACCCATCGTATTTACAGTCCCACCAATATTCAAGGGGAAGGAATTGTGCAGGGGGTATACACCTTGGGGTGGGAATCTTGGGGGCTATCTTAGAATTCTACTTACCACAGGACAGATGGAATCAAGAATGGTAGTGAGTGCCATCATTAATTATTTGCGGAAGTTAAAATAGTTATACTAACATAGATGGTGCCAATGGAATGCTAGCTTGGAGTTTTACATTAGTATGTGCATGTTTGTGGAAAACTATACTAATTACACATCCATATATATTTTATATATATAAAAATACCTAAAAATGTTTTAATATACTCATCTATATCTATACATTCATTTTATCTTAAATCTGTCTTTGTTACCTCTTTGTAAACATTTCCCACAACTCAACTATATTTGAATGTGAAATTTAAGATTAATTTTGCAAATATCATGTTTTTAATGAGAGATACACGCCAGTACTTTTGCCCTTATCCTTTGTTATAAAATTCTGGACAATTTAACATGCTTTTTTCCCTAGCCCAGGTAAAGTGTAATGTAAAGTGACTGCCTTCCTCTGTCTTCCCAGATAAGGATAATTGCTTCTGGTGAATAATCAAATTATGGCTTTCATCCTCTGACCTTTGAAGGAATAGCATTCCCTTTATTTTAAGTTGCCTTTGTGTGTATGTGTGTGAGCCAAGCCACATTTTGAAATGCAATTTTTCTTAGAAACAGATCTGTTGAGAAACAAAATAAAAATGTAGATTTCTTATTTGAATAGAGAGAAAAGTGTTTTTCTCTGGTTTCTTAAAATGTATTTATAAATAGCACCTGTTTCTATGTAAATATAGAGATTTGTTGTTAATTGTTCTCTGCTGGTATTGCTAAAATTGATGATAGAGCTTTTCTTTGAGTCATATCTATACTGTATTGTTTGCTGTACTGTCTAAATCATTTCTCCAATCTAAGAAGAAAGTTTATCTTCAGGGGAGGGCTTTCTCACTGTTTTCCATTGATTTTGAATACATCAGAATCTATTGCCAGTTTTTGATTGTTTATTTAGTAGGCCATAAGAAAGATTCAAGTTTACTTCCATTTTGCAGAGGGTTTGAAAATTTATAAATTTTCCAAATATGGTGTGTTAGCTAGAGCATCTTGTAGGGAGGAAAAATGTGAGAAGTGAACTTTGGTTTCATTTTCAAATTGGTGGATTATGTTGATCTGGTATATAGCTGGTATGAAACTAAATACTGACACTTAAAGACTTAACTGTTTTGTTTGCCTGTTTAATTTGGAGCTGCTTATAGCTATTGAGATCATTACATGCAACAATCTTTTGTATATTTATTCATAGATTACTCTGCTATACAGCCTTTAGCTTTATACTTGATTTGAAGTTTGAAATGAAATTGGAAATTAATATTTTTACCTTTACTCACATGCACATTCAGTCTTCATTTCTCTCCATTGACTTAGCATTTCTCTTCATTTAGGAAAAAAAATAGATTTGTGGCTCAGTTAGTAATTATGTTCATCCTCCAATTCAAGTCTTTCCTGAACTTGTTCAGGTCAGGCTGACATTTTGCACTTGATTAAGGGAGACTCGATGATAGCTAGGAATCCACAATATAATATCTTGTTCTTGAGTGTGACTTAATGTGCTTCTAACCTAATCTCAAGGTGTCCTGATTGTCTTGTTCATTCATTGATATTTCTTCCTATTTCCTTGGCATACCAGATCAAAATTTGAATATATTAATAGCCTTCTAAGGAAAGAAATACACCATAGCTGTAAAAGAAGAAAAAGTTGCTTCTGGTAGCAAGAAGGTGGATGACACAAACTTCCTTGCGCAATGGTGACCTTTCAATTAGCTTACCTATTTTCTCTGTTCTTTGAGGGTTTGATGCTAGCTGCCCATTTCAAATCTGCAGCTTCAAACAATATTGCTGTTTCTTCTTTGAAACATAGATCTCAGGGAAGTGACTGTTGGAAAAGTAATAATAATGATTCTGTTTATTATTTTATTAACTGTATATATTAGTACAGATAAATGAACACATGGATAAAGAATATTCTAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5962:HG2_PB_assemblyticsPBcR_24336:HG2_10X_allpass_1413:HG3_10X_allpass_1694:HG2_PB_pbsv_8351:HG2_Ill_MetaSV_4767:HG2_Ill_tnscope_969:HG3_PB_pbsv_8139:HG3_PB_SVrefine2PBcRDovetail_3790:HG3_PB_SVrefine2Falcon1Dovetail_5057:HG2_PB_SVrefine2PBcRplusDovetail_10358:HG2_PB_SVrefine2PB10Xhap12_6089:HG2_PB_SVrefine2Falcon2Bionano_4049:HG2_PB_SVrefine2Falcon1plusDovetail_11150;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5962:HG3_PB_SVrefine2PBcRDovetail_3790:HG3_PB_SVrefine2Falcon1Dovetail_5057:HG2_PB_SVrefine2PBcRplusDovetail_10358:HG2_PB_SVrefine2PB10Xhap12_6089:HG2_PB_SVrefine2Falcon2Bionano_4049:HG2_PB_SVrefine2Falcon1plusDovetail_11150;NumExactMatchSVs=7;ClusterMaxShiftDist=0.119138;ClusterMaxSizeDiff=0.119138;ClusterMaxEditDist=0.119138;PBcalls=9;Illcalls=2;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-4041;DistBack=184293;DistForward=-3997;DistMin=-3997;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=224;REFWIDENED=7:87668513-87672777;PctSeqSimilarity=0.9554;PctSizeSimilarity=0.9998;PctRecOverlap=0.9928;SizeDiff=-1;StartDistance=-28;EndDistance=-29;GTMatch=0;TruScore=98;MatchId=3736.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:53:1|0:1:29:38:0:./.:0:0:0:0:0/1:51:11:0/1:276:155:4047:.:.
chr7	88069044	HG3_Ill_MetaSV_4946	TTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAG	T	20	PASS	ClusterIDs=HG3_PB_pbsv_8141:HG4_PB_HySA_12334:HG2_PB_HySA_15322:HG4_PB_assemblyticsfalcon_24545:HG4_PB_SVrefine2PBcRDovetail_4130:HG4_PB_SVrefine2Falcon1Dovetail_5081:HG4_Ill_svaba_10784:HG4_Ill_scalpel_7953:HG4_Ill_SVrefine2DISCOVARDovetail_6089:HG4_Ill_GATKHCSBGrefine_5857:HG3_PB_assemblyticsfalcon_24969:HG3_PB_SVrefine2Falcon1Dovetail_5059:HG3_Ill_svaba_10772:HG3_Ill_scalpel_8257:HG3_Ill_MetaSV_4946:HG3_Ill_GATKHCSBGrefine_5683:HG2_PB_assemblyticsfalcon_25111:HG2_PB_assemblyticsPBcR_24339:HG2_PB_SVrefine2PBcRplusDovetail_10360:HG2_PB_SVrefine2PB10Xhap12_6091:HG2_PB_SVrefine2Falcon2Bionano_4051:HG2_PB_SVrefine2Falcon1plusDovetail_11152:HG2_Ill_svaba_10679:HG2_Ill_scalpel_8141:HG2_Ill_manta_2402:HG2_Ill_SVrefine2DISCOVARplusDovetail_12209:HG2_Ill_MetaSV_4769:HG2_Ill_GATKHCSBGrefine_5767:HG2_10X_SVrefine210Xhap12_5965:HG4_Ill_Krunchall_12152:HG2_Ill_Krunchall_11834:HG4_Ill_MetaSV_4994:HG2_PB_HySA_15321:HG4_PB_pbsv_8370:HG2_PB_pbsv_8353;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5965:HG2_Ill_GATKHCSBGrefine_5767:HG2_Ill_MetaSV_4769:HG2_Ill_SVrefine2DISCOVARplusDovetail_12209:HG2_Ill_manta_2402:HG2_Ill_scalpel_8141:HG2_Ill_svaba_10679:HG2_PB_SVrefine2Falcon1plusDovetail_11152:HG2_PB_SVrefine2Falcon2Bionano_4051:HG2_PB_SVrefine2PB10Xhap12_6091:HG2_PB_SVrefine2PBcRplusDovetail_10360:HG2_PB_assemblyticsPBcR_24339:HG2_PB_assemblyticsfalcon_25111:HG3_Ill_GATKHCSBGrefine_5683:HG3_Ill_MetaSV_4946:HG3_Ill_scalpel_8257:HG3_Ill_svaba_10772:HG3_PB_SVrefine2Falcon1Dovetail_5059:HG3_PB_assemblyticsfalcon_24969:HG4_Ill_GATKHCSBGrefine_5857:HG4_Ill_SVrefine2DISCOVARDovetail_6089:HG4_Ill_scalpel_7953:HG4_Ill_svaba_10784:HG4_PB_SVrefine2Falcon1Dovetail_5081:HG4_PB_SVrefine2PBcRDovetail_4130:HG4_PB_assemblyticsfalcon_24545;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0199005;ClusterMaxSizeDiff=0.0199005;ClusterMaxEditDist=0.0248756;PBcalls=17;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=11;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-201;DistBack=19776;DistForward=4183;DistMin=4183;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:88069045-88069246;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3737.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:./.:0:0:0:0:./.:0:0:0:0:1/1:0:59:./.:.:.:.:.:.
chr7	88091299	HG4_Ill_GATKHCSBGrefine_5858	AACAATATTTTTTTTTTTTTTTTTTAGTATTTGATTGTGTATTTATACCACATTTTCTTTATTTTTTTTTTCTTTTTTTTTTTTTTTTATTATACTCTCAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4770:HG4_Ill_SVrefine2DISCOVARDovetail_6090:HG2_Ill_SVrefine2DISCOVARplusDovetail_12210:HG3_PB_assemblyticsfalcon_24971:HG2_PB_assemblyticsPBcR_24341:HG4_PB_assemblyticsfalcon_24547:HG2_PB_assemblyticsfalcon_25113:HG4_PB_HySA_12336:HG3_PB_HySA_12778:HG2_PB_HySA_15324:HG4_PB_pbsv_8372:HG4_PB_SVrefine2PBcRDovetail_4132:HG4_PB_SVrefine2Falcon1Dovetail_5083:HG4_Ill_manta_2065:HG4_Ill_GATKHCSBGrefine_5858:HG4_10X_allpass_1652:HG3_PB_pbsv_8143:HG3_PB_SVrefine2Falcon1Dovetail_5061:HG3_Ill_manta_1968:HG3_Ill_MetaSV_4948:HG3_Ill_GATKHCSBGrefine_5684:HG3_10X_allpass_1695:HG2_PB_pbsv_8355:HG2_PB_SVrefine2PBcRplusDovetail_10362:HG2_PB_SVrefine2PB10Xhap12_6093:HG2_PB_SVrefine2Falcon2Bionano_4053:HG2_PB_SVrefine2Falcon1plusDovetail_11154:HG2_Ill_manta_2403:HG2_Ill_SpiralSDKrefine_16071:HG2_Ill_MetaSV_4771:HG2_Ill_GATKHCSBGrefine_5768:HG2_10X_allpass_1414:HG2_10X_SVrefine210Xhap12_5967:HG2_Ill_breakscan11_1206:HG4_Ill_MetaSV_4996:HG2_Ill_tnscope_970;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5967:HG2_10X_allpass_1414:HG2_Ill_GATKHCSBGrefine_5768:HG2_Ill_MetaSV_4771:HG2_Ill_SpiralSDKrefine_16071:HG2_Ill_manta_2403:HG2_PB_SVrefine2Falcon1plusDovetail_11154:HG2_PB_SVrefine2Falcon2Bionano_4053:HG2_PB_SVrefine2PB10Xhap12_6093:HG2_PB_SVrefine2PBcRplusDovetail_10362:HG2_PB_pbsv_8355:HG3_10X_allpass_1695:HG3_Ill_GATKHCSBGrefine_5684:HG3_Ill_MetaSV_4948:HG3_Ill_manta_1968:HG3_PB_SVrefine2Falcon1Dovetail_5061:HG3_PB_pbsv_8143:HG4_10X_allpass_1652:HG4_Ill_GATKHCSBGrefine_5858:HG4_Ill_manta_2065:HG4_PB_SVrefine2Falcon1Dovetail_5083:HG4_PB_SVrefine2PBcRDovetail_4132:HG4_PB_pbsv_8372;NumExactMatchSVs=23;ClusterMaxShiftDist=0.159346;ClusterMaxSizeDiff=0.159346;ClusterMaxEditDist=0.187629;PBcalls=17;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-450;DistBack=-451;DistForward=51780;DistMin=-451;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=7:88091300-88091757;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3738.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:./.:0:1:0:0:./.:0:0:0:0:1/1:0:15:1/1:2:22:.:.:.
chr7	89598872	HG4_PB_HySA_12355	GGACCTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_592:HG3_PB_assemblyticsfalcon_24984:HG4_Ill_Krunchall_12169:HG2_Ill_Krunchall_11848:HG4_PB_assemblyticsfalcon_24561:HG2_PB_assemblyticsfalcon_25127:HG4_Ill_Spiral_687:HG4_PB_pbsv_8384:HG4_PB_SVrefine2PBcRDovetail_4136:HG4_PB_SVrefine2Falcon1Dovetail_5088:HG4_PB_HySA_12355:HG4_Ill_scalpel_7970:HG4_Ill_manta_2069:HG4_Ill_SVrefine2DISCOVARDovetail_6101:HG4_Ill_GATKHCSBGrefine_5868:HG4_10X_allpass_1654:HG3_PB_SVrefine2Falcon1Dovetail_5069:HG2_PB_pbsv_8366:HG2_PB_SVrefine2Falcon2Bionano_4061:HG2_PB_SVrefine2Falcon1plusDovetail_11161:HG2_Ill_scalpel_8152:HG2_Ill_SVrefine2DISCOVARplusDovetail_12220:HG2_Ill_GATKHCSBGrefine_5777:HG2_10X_allpass_1415:HG2_10X_SVrefine210Xhap12_5974:HG4_Ill_MetaSV_4999:HG2_Ill_tnscope_971:HG2_Ill_breakscan11_1207:HG2_Ill_MetaSV_4775;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5974:HG2_10X_allpass_1415:HG2_Ill_GATKHCSBGrefine_5777:HG2_Ill_SVrefine2DISCOVARplusDovetail_12220:HG2_Ill_scalpel_8152:HG2_PB_SVrefine2Falcon1plusDovetail_11161:HG2_PB_SVrefine2Falcon2Bionano_4061:HG2_PB_pbsv_8366:HG3_PB_SVrefine2Falcon1Dovetail_5069:HG4_10X_allpass_1654:HG4_Ill_GATKHCSBGrefine_5868:HG4_Ill_SVrefine2DISCOVARDovetail_6101:HG4_Ill_manta_2069:HG4_Ill_scalpel_7970:HG4_PB_HySA_12355:HG4_PB_SVrefine2Falcon1Dovetail_5088:HG4_PB_SVrefine2PBcRDovetail_4136;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0738363;ClusterMaxSizeDiff=0.0738363;ClusterMaxEditDist=0.0738363;PBcalls=11;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=45;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=7:89598873-89599200;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:26:0|1:34:0:1:22:./.:0:0:0:0:0/1:25:14:0/1:31:7:.:.:.
chr7	89810407	HG2_PB_SVrefine2PB10Xhap12_6107	TGCCTAAGATTTATTATTTAAGTTTATGAGCTAAAGGAAATCTTAGTGTTTATCTAGCCTAACTTCCTTGTTCTACATTTCTGTTTTGTTTTTTCAAATGATGTATCTTGTTTGCTTCACGATTATGTTAAAGAAAAAGTTTTTTTTCAGAAATAAGAAATAGATTATAAATTTTTAAAAAGGAAAGAAAATTGAGGAAAAAGGGAATTAAAGGATATTGGATAATATAGAGAAAGATATTTATAGGGCATAAAATCATTTCTAGTGGAAGGAGGACACATGGGTTTGTCATTGCCAGAGCACCTTTTGTTTTTCTGAGCATTTTGTGAGATGGCCAATTTTACCCAGCATAGAATCGAGTAAGAATGAAACTGAAATAATTTGCAAAGTTGAAAGTTGAGTGTGACCATAAGCCTCCAATCCTAGTTCCAGCCTGCCCACCATGCTGGGAATATAGTTTGGATATTTGTCCCTGCCCAAATCTCATGCTGAAATATAATCTCCAATGTTGGAAGTAGGACCTTGTGGGAGGTGTTTGGAACATGGGAGCAGATCTCTAGAAGCTGAGCAAATGCCAGCACCATGCTTCCTGTAAAACCTGAAGAACCATGAGCCACTTAATCCTCTTTTTTTATAAATTACTCAGTCTCATGTGTTACTTTACAGCAAGGCAAAAATGGCTTAATACCTTGGGCATGCTCCAGTAGAGATTAGAATTCACATGAAACAACAAATGAGAAACAGGGAGAAAACTATTAAGAGGTCTATGGTAGGGAAGATTGTGGCTATTGTCTCCATTTACTTTTAGAATTTCTTCGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAACTAGTAGAAACAGAGTAACCAAATCTCTTAACTGGAAATGACTTTATATGTTGTATTACTAAAAGACGTCCAATTTCCAACATCCTGAATATATACAGTGACAGAGGACAGATAACTCACTATTTTATGGGGTAGTTTATTCATTTTTGTAAATACCAGCCATTGTTCTTAATATTGTTATCAAGGGTCTCAACCCGAAAATAAATTCATCTCCCCTACCCATCTTTCGCAACAACAAAGCAAAAAATTCCCCTTCCAGACTTTGTCACATCTGTTAATGACATAGCCATTTTATCGAACTCAAAAACTTTGTGTTCCCTTGCATTTAAAAATCCAGTTATCAAGTGTTGCTAATTCCAATTTGGACTCCGTAGCATCCATTCCTACCCAGTTTCGTTTACAGCATACCATCACTTCTGCTGTACATTTATTCATCACACAGACAAACTCTGATATAATATGGAGGAAGATTATGCAAGGGCATGAATACTAGGAGGAACCATTGAGGAATATCATGGAGGCTGGCCACCACACAAGGTAACAGAATAGATGACCACTGATAAGATCACTGGGAAGAGGACATCTTTCTCCATAGGTCTAGAAGGAAAAGTTCTAGAGATAACTCTGTCTTAGTTTAGATCATGTGCCCATCTCTGAACCAATAATTATGACCAGAGAAATGGACTCCCTTAGTTAACCAGACTTGGGTCATGTGCTCTACCTATGGCTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCCCCCAGTCTTGAGTGCAGTGGCGTGGTCTCGGCTCACTGCAAGCTCTGCCTCCCATGTTAACACCATTCTCCTGCCTCAGACTCCCAAGTAGCTGGGACTACTGGTGCCTGCCACCACACCGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACTTGTGATCTGCCCGCCTTGGCTTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCGCACCCGGCCTACCTATGGCTTTTGAGGGCAAATGGTGTCATCTCCACCTGAATCACTGAATCAGAAAAGAGGGGATGCTGAACGGAAATACTACATATATCCTCTATTCTACCTCACATTTCAACTGCTTTCTTGGTCTTCTAAACATCCTCATATTACTGTCTCTATCTTCCTTTTCAAACAGTACATAGCTGACAAATTAACTTCAGTAAAACTCAACTTGGATCATATGTTTTCTTTTCTCAAAATCTTCCCTAAATGGGTCCTCACACTTAAAAGGTAAGTCCTTAGTGCTTACCTG	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_4953:HG4_10X_allpass_1655:HG2_PB_assemblyticsfalcon_25132:HG3_10X_allpass_1696:HG4_Ill_Krunchall_12171:HG3_Ill_Krunchall_11568:HG2_Ill_Krunchall_11851:HG3_PB_assemblyticsfalcon_24986:HG4_PB_assemblyticsfalcon_24564:HG2_10X_allpass_1416:HG2_PB_HySA_15347:HG2_Ill_tnscope_972:HG4_PB_pbsv_8386:HG4_PB_SVrefine2PBcRDovetail_4137:HG4_PB_SVrefine2Falcon1Dovetail_5090:HG4_Ill_SVrefine2DISCOVARDovetail_6102:HG4_Ill_MetaSV_5000:HG4_Ill_GATKHCSBGrefine_5869:HG3_PB_pbsv_8157:HG3_PB_SVrefine2PBcRDovetail_3791:HG3_Ill_GATKHCSBGrefine_5690:HG2_PB_pbsv_8369:HG2_PB_SVrefine2PBcRplusDovetail_10370:HG2_PB_SVrefine2PB10Xhap12_6107:HG2_PB_SVrefine2Falcon2Bionano_4063:HG2_Ill_SVrefine2DISCOVARplusDovetail_12222:HG2_Ill_MetaSV_4777:HG2_Ill_GATKHCSBGrefine_5779:HG2_10X_SVrefine210Xhap12_5977:HG2_PB_assemblyticsPBcR_24355:HG2_Ill_breakscan11_1208;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5977:HG2_Ill_GATKHCSBGrefine_5779:HG2_Ill_MetaSV_4777:HG2_Ill_SVrefine2DISCOVARplusDovetail_12222:HG2_PB_SVrefine2Falcon2Bionano_4063:HG2_PB_SVrefine2PB10Xhap12_6107:HG2_PB_SVrefine2PBcRplusDovetail_10370:HG2_PB_pbsv_8369:HG3_Ill_GATKHCSBGrefine_5690:HG3_PB_SVrefine2PBcRDovetail_3791:HG3_PB_pbsv_8157:HG4_Ill_GATKHCSBGrefine_5869:HG4_Ill_MetaSV_5000:HG4_Ill_SVrefine2DISCOVARDovetail_6102:HG4_PB_SVrefine2Falcon1Dovetail_5090:HG4_PB_SVrefine2PBcRDovetail_4137:HG4_PB_pbsv_8386;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0407797;ClusterMaxSizeDiff=0.0407797;ClusterMaxEditDist=0.152799;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2192;DistBack=27908;DistForward=722;DistMin=722;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:89810408-89812601;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3740.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:92:./.:0:1:2:19:./.:0:0:0:0:1/1:0:24:1/1:3:162:2351:.:.
chr7	90373948	HG2_PB_SVrefine2PBcRplusDovetail_10371	CCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTGCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACGCCCCCACCTCCCTCCCGGA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6108:HG3_Ill_Krunchall_11577:HG2_PB_HySA_15354:HG2_PB_pbsv_8372:HG3_PB_pbsv_8161:HG3_Ill_scalpel_8270:HG3_Ill_manta_1974:HG3_Ill_GATKHCSBGrefine_5693:HG3_10X_allpass_1698:HG2_PB_SVrefine2PBcRplusDovetail_10371:HG2_PB_SVrefine2PB10Xhap12_6109:HG2_Ill_scalpel_8157:HG2_Ill_manta_2410:HG2_Ill_MetaSV_4778:HG2_Ill_GATKHCSBGrefine_5782;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5782:HG2_Ill_MetaSV_4778:HG2_Ill_manta_2410:HG2_Ill_scalpel_8157:HG2_PB_SVrefine2PB10Xhap12_6109:HG2_PB_SVrefine2PBcRplusDovetail_10371:HG3_10X_allpass_1698:HG3_Ill_GATKHCSBGrefine_5693:HG3_Ill_manta_1974:HG3_Ill_scalpel_8270;NumExactMatchSVs=10;ClusterMaxShiftDist=0.165803;ClusterMaxSizeDiff=0.165803;ClusterMaxEditDist=0.182292;PBcalls=6;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-207;DistBack=22532;DistForward=-146;DistMin=-146;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=63;REFWIDENED=7:90373949-90374218;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:35:0|1:19:2:2:35:./.:0:0:0:0:0/1:40:16:./.:.:.:.:.:.
chr7	90583932	HG3_Ill_scalpel_8271	TCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTATCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGGTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_593:HG2_PB_assemblyticsfalcon_25141:HG4_PB_assemblyticsfalcon_24570:HG3_PB_assemblyticsfalcon_24990:HG2_PB_assemblyticsPBcR_24362:HG4_PB_HySA_12358:HG4_Ill_Krunchall_12180:HG4_Ill_Spiral_688:HG4_Ill_MetaSV_5001:HG3_Ill_MetaSV_4955:HG2_Ill_tnscope_973:HG2_Ill_MetaSV_4779:HG4_PB_SVrefine2PBcRDovetail_4138:HG4_PB_SVrefine2Falcon1Dovetail_5092:HG4_Ill_manta_2071:HG4_Ill_SVrefine2DISCOVARDovetail_6105:HG4_Ill_GATKHCSBGrefine_5873:HG3_PB_pbsv_8162:HG3_PB_SVrefine2Falcon1Dovetail_5073:HG3_Ill_scalpel_8271:HG3_Ill_manta_1975:HG3_Ill_SVrefine2DISCOVARDovetail_6255:HG3_Ill_GATKHCSBGrefine_5694:HG3_10X_allpass_1699:HG2_PB_pbsv_8373:HG2_PB_SVrefine2PBcRplusDovetail_10372:HG2_PB_SVrefine2PB10Xhap12_6110:HG2_PB_SVrefine2Falcon2Bionano_4064:HG2_PB_SVrefine2Falcon1plusDovetail_11163:HG2_PB_HySA_15355:HG2_Ill_scalpel_8158:HG2_Ill_manta_2412:HG2_Ill_SVrefine2DISCOVARplusDovetail_12224:HG2_Ill_GATKHCSBGrefine_5783:HG2_10X_SVrefine210Xhap12_5979:HG4_PB_pbsv_8389:HG2_Ill_breakscan11_1209:HG3_Ill_Spiral_9062;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5979:HG2_Ill_GATKHCSBGrefine_5783:HG2_Ill_SVrefine2DISCOVARplusDovetail_12224:HG2_Ill_manta_2412:HG2_Ill_scalpel_8158:HG2_PB_HySA_15355:HG2_PB_SVrefine2Falcon1plusDovetail_11163:HG2_PB_SVrefine2Falcon2Bionano_4064:HG2_PB_SVrefine2PB10Xhap12_6110:HG2_PB_SVrefine2PBcRplusDovetail_10372:HG2_PB_pbsv_8373:HG3_10X_allpass_1699:HG3_Ill_GATKHCSBGrefine_5694:HG3_Ill_SVrefine2DISCOVARDovetail_6255:HG3_Ill_manta_1975:HG3_Ill_scalpel_8271:HG3_PB_SVrefine2Falcon1Dovetail_5073:HG3_PB_pbsv_8162:HG4_Ill_GATKHCSBGrefine_5873:HG4_Ill_SVrefine2DISCOVARDovetail_6105:HG4_Ill_manta_2071:HG4_PB_SVrefine2Falcon1Dovetail_5092:HG4_PB_SVrefine2PBcRDovetail_4138;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0827815;ClusterMaxSizeDiff=0.0827815;ClusterMaxEditDist=0.0827815;PBcalls=16;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=37654;DistForward=55890;DistMin=37654;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=7:90583933-90584252;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3742.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:1/1:2:28:1:25:./.:0:0:0:0:1/1:0:36:./.:1:11:.:.:.
chr7	92072240	HG2_Ill_GATKHC_13799	GCAAAAGCAGAACTACTGATAAGGGTCCAACAAAGATCACAAGGCAAAGGA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12231:HG3_Ill_svaba_10796:HG3_Ill_Krunchall_11586:HG3_Ill_GATKHC_13781:HG3_Ill_GATKHCSBGrefine_5696:HG3_Ill_250bpfermikitraw_11237:HG2_Ill_svaba_10699:HG2_Ill_GATKHC_13799:HG2_Ill_GATKHCSBGrefine_5785:HG2_Ill_250bpfermikitraw_11548:HG3_PB_HySA_12804:HG2_PB_SVrefine2PBcRplusDovetail_10374:HG2_PB_SVrefine2Falcon2Bionano_4065;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11548:HG2_Ill_GATKHCSBGrefine_5785:HG2_Ill_GATKHC_13799:HG2_Ill_svaba_10699:HG3_Ill_250bpfermikitraw_11237:HG3_Ill_GATKHCSBGrefine_5696:HG3_Ill_GATKHC_13781:HG3_Ill_Krunchall_11586:HG3_Ill_svaba_10796;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0761905;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.171429;PBcalls=3;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=123;DistForward=72090;DistMin=123;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=149;REFWIDENED=7:92072118-92072316;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3743.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:23:0|1:25:1:0:23:./.:0:0:0:0:0/1:16:33:./.:.:.:.:.:.
chr7	93169988	HG2_PB_PB10Xdip_29157	TTATACATCTTTATTATATTTTATATATTATATTTTATATATATTATATATTTATATTATATAATATTATATTTATATTATATAATATTATATTTATATATTATATTTTATATGTAT	G	20	PASS	ClusterIDs=HG3_Ill_Krunchall_11593:HG3_PB_HySA_12807:HG3_Ill_GATKHC_13786:HG4_PB_SVrefine2Falcon1Dovetail_5096:HG3_PB_SVrefine2Falcon1Dovetail_5079:HG3_Ill_manta_1977:HG2_PB_assemblyticsfalcon_25151:HG2_PB_assemblyticsPBcR_24374:HG2_PB_SVrefine2PBcRplusDovetail_10379:HG2_PB_SVrefine2PB10Xhap12_6115:HG2_PB_SVrefine2Falcon1plusDovetail_11168:HG2_PB_PB10Xdip_29158:HG2_PB_PB10Xdip_29157:HG2_Ill_manta_2413:HG2_10X_SVrefine210Xhap12_5986:HG2_Ill_SpiralSDKrefine_16088:HG3_Ill_MetaSV_4957:HG3_Ill_Spiral_9066:HG2_Ill_Spiral_594:HG3_PB_pbsv_8169:HG3_Ill_svaba_10803:HG3_10X_allpass_1701:HG2_PB_pbsv_8379:HG2_Ill_svaba_10702:HG2_Ill_breakscan11_1210:HG3_Ill_GATKHCSBGrefine_5701:HG2_Ill_GATKHC_13805:HG2_Ill_GATKHCSBGrefine_5789:HG4_PB_assemblyticsfalcon_24579:HG3_PB_assemblyticsfalcon_24997;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5986:HG2_Ill_manta_2413:HG2_PB_PB10Xdip_29157:HG2_PB_PB10Xdip_29158:HG2_PB_SVrefine2Falcon1plusDovetail_11168:HG2_PB_SVrefine2PB10Xhap12_6115:HG2_PB_SVrefine2PBcRplusDovetail_10379:HG2_PB_assemblyticsPBcR_24374:HG2_PB_assemblyticsfalcon_25151:HG3_Ill_manta_1977:HG3_PB_SVrefine2Falcon1Dovetail_5079:HG4_PB_SVrefine2Falcon1Dovetail_5096;NumExactMatchSVs=12;ClusterMaxShiftDist=0.193548;ClusterMaxSizeDiff=0.193548;ClusterMaxEditDist=0.221198;PBcalls=14;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-116;DistBack=-98;DistForward=13976;DistMin=-98;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=7:93169988-93170104;PctSeqSimilarity=0.9957;PctSizeSimilarity=0.9915;PctRecOverlap=0.9915;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:42:0|1:24:1:1:40:./.:0:0:0:0:0/1:41:22:./.:.:.:.:.:.
chr7	93328030	HG2_PB_HySA_15369	CTACAAGCCACAGTTGACCAGCTCCTGCTTTATACCCTTGTTGAGGGCAACAATCACCACTTCCTCCACTCAAAGTTAAGGTTATGCAAGTAGAAATCTTAATGAGCTACATTTTCCAGACAGACTAAAGCTTCACAGTGGCACTAAACAAGTGATCATTGGTCTTATGTTTGGAATCTGAAAAGGCTTTGAAATATTAAACAATGGGTAAAATTCTCTTCCCTCTCCTCCCCTCTCCTTTCTATTTCTTATCTCAACCAATATTTTAAAATCCCATACTTAGGATTTAAAAATATTATACAAATTATACTAATTATTTCATATGAATTTTCATTTAATTAATGTTTACTTTTTCATTATTCTTTTTGAATTGCATCTCAAATTCTTCTGCTGATAACATCTTCCGTCTTCAGGCAATATTTTTTAGACTCTTTAAGTGCGAGTATAATGGCAGTAATTTTTTTTTTAGGTTTTCGCTGTCTAAAGCAGTGGTTCTCAAAGTATAGATAGACTATAGAACCTTGGGGGTCCTGAGGTACTTTCAGAGGATTCATAAAAACTATTTTGATATATATACTATCCAGAGCAAAATCAGGGAAGAGGAGCATGGAGATGTCCCACCAGACAGTTACACAACAGGTCTGGAGGTATAAGAAGCCATGTAGATTTCACTGAATTACAAGAATATCCAGGACATAGAGTACAAGGTGGGATTGATAAAGGATGGGGCTGGAGAGGTAGACAGGGATCAGACCACAAATAACATTTTGGGCATCCACTGTAGTTCAGGTAACCTTCAGTCACACCAGGAAAACTCAAATAACCTCCTAGTTTGTTACTTTATCTCAAATGTTGCCCCTCTTTATTTACCATACCATTGGCAGAATGATCACCGTTTAATGTAGTTCATGTTTATACACTACTTAAACCCCGTCAATAGCTACTCATTGCTCTCAGAAGTATTTCTAACCACTTAATAGGACCTCAAATACCCATCATGATCTGACCCTAACTACATTTCCAGCCTCATCTTTTGTCAGCTCCTTCTTTATGCTGGCTGTTATTTTACGTAGCTCTTTTGGAATGTCTTCCAGAAGTGTTTTATAATACCATTGTTAGGTTTACTACTAGGTACTTGAGACACCTTGTAGCCTTTGCTGCTATTGAACATGATATCTTTCGTTGTAATTACATCTTCTAACTCCTTGATATTGGTGTATAGGAATGCAATTGATTTTCACATATTGATCTTATATCCAGTGACACTGCTGACTTGTTTTATTCATCCTGATATTTGTTTATGCATTCTTTTGGATTTTATATGTAGACAACTCATATAAACTGTAAATAATTTAGTCTTGCTTCTCTTCTATTTCTTTTCCATGTCTGCCCTCTTATAATTTTGAACTTTCTAACACCTCCAATATACTGCAATGAATGAGAGTTCCTGTTGCTTCTTATCTTTTCCAGCACTTAGTGTCAGTGTTCTCAGCTTTGACCATTTTAATAGGTGTGTAATGCTTGCTTAGGTCATTTATATTTATTCCTTCTACATTCCCTAGGTTTATTCTGCTAGACTTTTCCAAACTTAAATTGAAAGCTTAGCTCATTCACTTTTAGTCTTCTTTTTCTAAACATGATATTTTAAGTGTATAAAATTTCCTCCTTATATTTTTTTGGATACATCCTACATGTTTTGAGATGCTCTAGTTTCCTTATTATTTAATTCTGGATATTTTCTAATTTTTGATATAATATTTGTCTATGAATTATTTATGAGAGTGTTTAAATAGCCAAATATATATTGTTTTTAAAGATATATTTTGTGATTGATTTCTATTTAAATTACATTTTGGTCAGAGAAAATAATCTGTTAGATTAAAATATATTGACTTGATTAATGGCCTAATGCCTGGCCAATTTTAGTAAACATTCTTGGTTAACTTAAAAATGTATACAACTTAATTATTAATGTAGTGTTCACATTTCATTAGTTCAAATTTATCCATCTTATTGTTCAATATATGCCTTTACTGGGGATTGTGTTTTGGATTTATAGATTACTGAAAAAGATGTGTTAAATGGTGGAATTGTTTATTTTATTTGTTGTTCTGCTTATTTTCTGCTTGATAAATTTTAAAACTATGCCATTGAGTATAAATAAGTTTAGAATTATGATATATTTCTTTTGATTAAAAAGTTTATTGCCTGGGTGAGGTGGTTCACACCTGTAATCGCAGCAGTTTGGGAGGCCAAGGCTGGCAGATCACGAGGTCAAGAGATGGAGACCATCCTGGCCAACCTCGTGAAACCCCATCTCTACTAAAAATATAAAAATTAGCTGGGCATGGTGGCGCACACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGACAATCACTTGAACCCAGGAGGCGGAGGTTGCAGGGAGCCGAGGTTGCGCCACTGCACTTCAGCCTGGCGACAGAGTGAGACTCCTTCTCAAAAAAAAAAAAAAAAAAAAGTCAATATGCAAATGTTCCTATTGCACAAGTAAGGTACTGTCCTATTCTAACTGACAGGCAGAAGAAAATTAAATCACCTCTGGGCAAAGATGGCAACAAACAGATAATCTACTACATCACATACATTGTTTTCAGTATTCAAATAAAAATACAAAAATGATCAAAAACAAAGCAGAAAGCAGATAATAGAAACAGGTCCACAGATGAACTAGATTTTGGAAGCATTATATGTGGACATTAAAACAATTGTTATTCATAGGGTCAAGAAAATCAATGTCAAAGTATAGAATTTCACAAGAGAACTGTTTCTCAGCTTTTAAATCTCTTATCTCACCCCACATACGATTTAGAAAATGTGTCAAGAGAAAAAGCAATTCAGACTATTGGACTTATTCTCTGTGGATCTTGGTCCCTCCAGCTCTTGCTCTCTCTCTCTTTCTCTTTTTTTTTTTTTTTTTTTCCAGATGGAGTCTCACTCTGTCACAGATTTTGCTCTCTTGATAGCTTTTAACTCTGATATTTCTTTCCACAGTGTTGTGAGAATGAGAATCAAGACTGCTGCTTTCTGCTACATCTCTAGGTTAATAACAATGTTATTAGCAAATGCTTCAAGGAGAAAAGGGGCAGAGAATGACATGGTCACCTCACTGAATTTTCATTCTCTCAGGAATCTAGGCTTCTCAAGCTCTGCTTGCATCTGCTGCTCTTTGATGTATTCAGGTGTTTGTTGATTCATTTTTGTACAACCAGCAATTATTCTCAATGGAAGGCTAGTATTTTACAAACTACCGTTATCACACACAAAGGTGGAAATCCTCAATCTTTCCTTTCAACGAAGTAAGTTAATTGATCTTTTGTTAGTTTTAATTACATATATATTTAGGAACATTGTTTTGACCTTTTTCAGTACTTTTTCCCTCTTTACACTTTTCTTTTAATTTTTCTTCTGTCTATGCATAAGATAATGTAGGATATATAGATTTTAAAAATATTTTACTGGTTCCACGGAAAATTTTAGCATTCATATTAGATTTACCATAGTTAAAAGTTAATATATTGTCTCTCTTCTGAAACAAATCAAGAATTTCAAATATCTTGTTTTTAATTGTCTTATCTCCTGAATTAAAAGCTTTTATTGCTTACTGTTTTAGTTCCCTCTTGCTTATTTAACCCCTCAATATATCCATTCTTGTTATTTCACACTAATTATTTCATATGAATTTTCATTTATTTCACGCCCACTTTTTCATTATTCTTTCTTGAATTGCATCTCAAATTCTCCTGCTGATAACATTGTCCTTATTTAGGCATTTTTTTTAAGACTCTTTAAGTGAGAGTATTGTGGTAACATTTTTTTTAGGTATTTGCTGTCTAAAACAGTGATTTTCAAAGGGTAGACTATAGAAACTTGGAGATCCTGAGATACTTTCAGAGGATTCAAAAAAATATTTGCATATATATGCTAAAATGCCATTTGCATTTTCCACCATATTGACATTTATGCTAGTTTTGAAAAGAAATGGTGGGTAAAACTTTGAGCTCTTTAGGAATGTTTTGATGGAAGAGTAAAAAATTATGAATTTTATTACATTTTGACATTTGAAATGTCTTTCTTATTATTCTATTTCAAGGAAAGGGAAATATACATAAAGCATACTGTATACTAAAAAGTATATTGATTTTCCTGAGGAGAAGCACTTGTCTAATAGTTTGAATTGTAATATTAATTAACTGCTTTTTCATAAAA	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4783:HG3_PB_pbsv_8170:HG3_PB_HySA_12810:HG2_PB_HySA_15369:HG2_PB_pbsv_8380:HG4_PB_SVrefine2Falcon1Dovetail_5097:HG2_PB_SVrefine2PBcRplusDovetail_10380:HG2_PB_SVrefine2PB10Xhap12_6116:HG3_PB_SVrefine2Falcon1Dovetail_5080:HG3_PB_assemblyticsfalcon_24998:HG4_PB_assemblyticsfalcon_24580:HG2_PB_assemblyticsPBcR_24375:HG3_Ill_MetaSV_4958;NumClusterSVs=13;ExactMatchIDs=HG2_PB_HySA_15369:HG3_PB_HySA_12810;NumExactMatchSVs=2;ClusterMaxShiftDist=0.200931;ClusterMaxSizeDiff=0.200931;ClusterMaxEditDist=0.200931;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-4252;DistBack=316;DistForward=-4252;DistMin=-4252;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:93328031-93332284;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=0.9998;SizeDiff=1;StartDistance=0;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:59:27:0|1:51:0:0:22:./.:0:0:0:0:0/1:61:9:0/1:289:154:4974:.:.
chr7	93541817	HG2_PB_assemblyticsfalcon_25153	TGGCATACTACAATTTATTTGTTTATTTAATTGTGGTTTGCCTCTAGAAGTTTTCCACCTGCAAATTAGTATTTATTTAGTGAAGTGTTCAGTATGGCCCCTTTCCTCCGATTAAAATAAATACAAAGTAAATATTTGCTATGACATTTAGTTTACCATTGGAGACAGATTCTGAAGCCCAGCAATGTGAAGTTAAAACCCCGACTCTTCCACCTTGTCATTGAGAACTTTGGACAAATGACCAAATGACTTCAACTCTTTGAACATTTTTTTTTTTTTTTGTATAAAACTAGTGATTAGGATAGATTATCTGAATACTTGTAATCCCTTAGATCACAAATGGGTATATAAAAGGAAGCCTAATAAATGTCCTCTATTATTATACTTCCCGTGGACATTTTCCCACCATCTGGAATTTGGTCATACTGATCCCTCCACCTGAAATCTCCCTCCACTCCACCCCACCCCATTTTCAGCCTTTTGAAATCCTACTCTTCTATGAGACTTTCTCTCCCAATCTACCTCAAGAGTATTTTGTGTATCTCTTAAGTCATTTAACATTACTTTACTTTCTCTTATTATAATTTCTATGGTTGTCTTAATTTCAGTGCTGTATTGGAAATTTCCCAAGCCAGAAGATCTGTTCATCTTTGAAACTGTCATATCAACTAACAAATTGTCTGGACAATGAAATTGACTTTAAAAGCAGGCAAGAATAGTGCT	CAA	20	PASS	ClusterIDs=HG3_PB_pbsv_8172:HG4_Ill_GATKHCSBGrefine_5881:HG3_Ill_GATKHCSBGrefine_5703:HG2_Ill_GATKHCSBGrefine_5791:HG2_PB_HySA_15370:HG2_Ill_tnscope_974:HG4_PB_SVrefine2PBcRDovetail_4145:HG4_PB_SVrefine2Falcon1Dovetail_5099:HG4_Ill_manta_2072:HG4_Ill_SVrefine2DISCOVARDovetail_6117:HG3_PB_SVrefine2Falcon1Dovetail_5082:HG3_Ill_manta_1978:HG2_PB_assemblyticsfalcon_25153:HG2_PB_assemblyticsPBcR_24376:HG2_PB_SVrefine2PBcRplusDovetail_10381:HG2_PB_SVrefine2PB10Xhap12_6117:HG2_PB_SVrefine2Falcon2Bionano_4070:HG2_PB_SVrefine2Falcon1plusDovetail_11169:HG2_PB_PB10Xdip_29163:HG2_PB_PB10Xdip_29162:HG2_Ill_manta_2414:HG2_Ill_SVrefine2DISCOVARplusDovetail_12237:HG2_10X_SVrefine210Xhap12_5987:HG4_Ill_Spiral_689:HG3_Ill_Spiral_9068:HG2_Ill_Spiral_595:HG2_10X_allpass_1417:HG4_10X_allpass_1656:HG3_Ill_MetaSV_4960:HG3_10X_allpass_1703:HG2_Ill_MetaSV_4784:HG4_PB_assemblyticsfalcon_24581:HG3_PB_assemblyticsfalcon_24999:HG3_PB_HySA_12811:HG4_Ill_Krunchall_12189:HG3_Ill_Krunchall_11597:HG2_Ill_Krunchall_11871:HG4_Ill_MetaSV_5006:HG2_PB_pbsv_8382:HG4_PB_pbsv_8396;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5987:HG2_Ill_SVrefine2DISCOVARplusDovetail_12237:HG2_Ill_manta_2414:HG2_PB_PB10Xdip_29162:HG2_PB_PB10Xdip_29163:HG2_PB_SVrefine2Falcon1plusDovetail_11169:HG2_PB_SVrefine2Falcon2Bionano_4070:HG2_PB_SVrefine2PB10Xhap12_6117:HG2_PB_SVrefine2PBcRplusDovetail_10381:HG2_PB_assemblyticsPBcR_24376:HG2_PB_assemblyticsfalcon_25153:HG3_Ill_manta_1978:HG3_PB_SVrefine2Falcon1Dovetail_5082:HG4_Ill_SVrefine2DISCOVARDovetail_6117:HG4_Ill_manta_2072:HG4_PB_SVrefine2Falcon1Dovetail_5099:HG4_PB_SVrefine2PBcRDovetail_4145;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0222531;ClusterMaxSizeDiff=0.0222531;ClusterMaxEditDist=0.0308339;PBcalls=18;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-720;DistBack=-2043;DistForward=16956;DistMin=-2043;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=7:93541817-93542539;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9986;PctRecOverlap=0.9972;SizeDiff=-1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=3746.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:77:1/1:0:13:0:7:./.:0:0:0:0:1/1:0:32:1/1:2:25:.:.:.
chr7	95386253	HG4_PB_SVrefine2Falcon1Dovetail_5104	ACTCATTGGATTTGTTTTTTTTTGTTTTTTTTTGTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCATTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTCTG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_11884:HG2_10X_allpass_1418:HG4_PB_HySA_12384:HG3_PB_HySA_12817:HG4_PB_assemblyticsfalcon_24589:HG3_PB_assemblyticsfalcon_25009:HG2_PB_assemblyticsPBcR_24389:HG3_PB_pbsv_8178:HG2_PB_HySA_15382:HG4_Ill_MetaSV_5011:HG3_Ill_MetaSV_4965:HG2_Ill_tnscope_975:HG4_PB_pbsv_8402:HG4_PB_SVrefine2PBcRDovetail_4148:HG4_PB_SVrefine2Falcon1Dovetail_5104:HG4_Ill_scalpel_7984:HG4_Ill_manta_2074:HG4_Ill_SVrefine2DISCOVARDovetail_6123:HG4_Ill_GATKHCSBGrefine_5884:HG4_10X_allpass_1657:HG3_PB_SVrefine2Falcon1Dovetail_5087:HG3_Ill_scalpel_8288:HG3_Ill_manta_1980:HG3_Ill_SVrefine2DISCOVARDovetail_6282:HG3_Ill_GATKHCSBGrefine_5708:HG3_10X_allpass_1704:HG2_PB_pbsv_8388:HG2_PB_assemblyticsfalcon_25162:HG2_PB_SVrefine2PBcRplusDovetail_10383:HG2_PB_SVrefine2PB10Xhap12_6120:HG2_PB_SVrefine2Falcon2Bionano_4073:HG2_PB_SVrefine2Falcon1plusDovetail_11171:HG2_Ill_manta_2416:HG2_Ill_SVrefine2DISCOVARplusDovetail_12243:HG2_Ill_GATKHCSBGrefine_5795:HG2_10X_SVrefine210Xhap12_5995:HG2_Ill_breakscan11_1211:HG3_Ill_MetaSV_4964:HG4_Ill_Krunchall_12199:HG3_Ill_Krunchall_11605:HG4_Ill_Krunchall_12198;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5995:HG2_Ill_GATKHCSBGrefine_5795:HG2_Ill_SVrefine2DISCOVARplusDovetail_12243:HG2_Ill_manta_2416:HG2_PB_SVrefine2Falcon1plusDovetail_11171:HG2_PB_SVrefine2Falcon2Bionano_4073:HG2_PB_SVrefine2PB10Xhap12_6120:HG2_PB_SVrefine2PBcRplusDovetail_10383:HG2_PB_assemblyticsfalcon_25162:HG2_PB_pbsv_8388:HG3_10X_allpass_1704:HG3_Ill_GATKHCSBGrefine_5708:HG3_Ill_SVrefine2DISCOVARDovetail_6282:HG3_Ill_manta_1980:HG3_Ill_scalpel_8288:HG3_PB_SVrefine2Falcon1Dovetail_5087:HG4_10X_allpass_1657:HG4_Ill_GATKHCSBGrefine_5884:HG4_Ill_SVrefine2DISCOVARDovetail_6123:HG4_Ill_manta_2074:HG4_Ill_scalpel_7984:HG4_PB_SVrefine2Falcon1Dovetail_5104:HG4_PB_SVrefine2PBcRDovetail_4148:HG4_PB_pbsv_8402;NumExactMatchSVs=24;ClusterMaxShiftDist=0.222857;ClusterMaxSizeDiff=0.222857;ClusterMaxEditDist=0.222857;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-577;DistForward=113042;DistMin=-577;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:95386254-95386599;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3748.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:./.:0:34:0:3:./.:0:0:0:0:1/1:0:40:./.:2:18:.:.:.
chr7	96067512	HG4_PB_SVrefine2Falcon1Dovetail_5105	TAAGAATTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACTCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1212:HG4_Ill_Krunchall_12201:HG3_Ill_Krunchall_11608:HG2_Ill_Krunchall_11888:HG4_PB_assemblyticsfalcon_24593:HG3_PB_assemblyticsfalcon_25011:HG2_PB_assemblyticsfalcon_25165:HG2_PB_assemblyticsPBcR_24394:HG4_Ill_MetaSV_5012:HG3_Ill_MetaSV_4966:HG2_Ill_tnscope_976:HG2_Ill_MetaSV_4786:HG4_PB_pbsv_8404:HG4_PB_SVrefine2PBcRDovetail_4149:HG4_PB_SVrefine2Falcon1Dovetail_5105:HG4_Ill_svaba_10819:HG4_Ill_manta_2075:HG4_Ill_SVrefine2DISCOVARDovetail_6125:HG4_Ill_GATKHCSBGrefine_5885:HG4_10X_allpass_1658:HG3_PB_pbsv_8180:HG3_PB_SVrefine2Falcon1Dovetail_5088:HG3_Ill_svaba_10812:HG3_Ill_manta_1981:HG3_Ill_SVrefine2DISCOVARDovetail_6286:HG3_Ill_GATKHCSBGrefine_5709:HG3_10X_allpass_1705:HG2_PB_pbsv_8390:HG2_PB_SVrefine2PBcRplusDovetail_10384:HG2_PB_SVrefine2PB10Xhap12_6121:HG2_PB_SVrefine2Falcon2Bionano_4074:HG2_PB_SVrefine2Falcon1plusDovetail_11172:HG2_Ill_svaba_10716:HG2_Ill_manta_2417:HG2_Ill_SVrefine2DISCOVARplusDovetail_12247:HG2_Ill_GATKHCSBGrefine_5796:HG2_10X_allpass_1419:HG2_10X_SVrefine210Xhap12_5996;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5996:HG2_10X_allpass_1419:HG2_Ill_GATKHCSBGrefine_5796:HG2_Ill_SVrefine2DISCOVARplusDovetail_12247:HG2_Ill_manta_2417:HG2_Ill_svaba_10716:HG2_PB_SVrefine2Falcon1plusDovetail_11172:HG2_PB_SVrefine2Falcon2Bionano_4074:HG2_PB_SVrefine2PB10Xhap12_6121:HG2_PB_SVrefine2PBcRplusDovetail_10384:HG2_PB_pbsv_8390:HG3_10X_allpass_1705:HG3_Ill_GATKHCSBGrefine_5709:HG3_Ill_SVrefine2DISCOVARDovetail_6286:HG3_Ill_manta_1981:HG3_Ill_svaba_10812:HG3_PB_SVrefine2Falcon1Dovetail_5088:HG3_PB_pbsv_8180:HG4_10X_allpass_1658:HG4_Ill_GATKHCSBGrefine_5885:HG4_Ill_SVrefine2DISCOVARDovetail_6125:HG4_Ill_manta_2075:HG4_Ill_svaba_10819:HG4_PB_SVrefine2Falcon1Dovetail_5105:HG4_PB_SVrefine2PBcRDovetail_4149:HG4_PB_pbsv_8404;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0544;ClusterMaxSizeDiff=0.0544;ClusterMaxEditDist=0.0544;PBcalls=14;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=1736;DistForward=19363;DistMin=1736;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=7:96067513-96067836;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3749.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:51:./.:3:3:0:5:./.:0:0:0:0:1/1:0:37:1/1:1:15:.:.:.
chr7	96475886	HG4_Ill_SVrefine2DISCOVARDovetail_6128	AGCAACTGGAACTTTCTTTTTTTTTTTTTTTTTATTCTTCTTTGTTTTATTTATAATTTTTTTTTTTACAATTCTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCAGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTAAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCAGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCGTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGAGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGTATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAGTGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCTC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1213:HG3_10X_allpass_1706:HG2_10X_allpass_1420:HG4_10X_allpass_1659:HG4_Ill_Krunchall_12206:HG3_Ill_Krunchall_11610:HG4_PB_assemblyticsfalcon_24595:HG3_PB_assemblyticsfalcon_25012:HG2_PB_assemblyticsfalcon_25166:HG2_PB_assemblyticsPBcR_24395:HG4_Ill_Krunchall_12205:HG2_Ill_tnscope_977:HG4_PB_pbsv_8406:HG4_PB_SVrefine2PBcRDovetail_4150:HG4_PB_SVrefine2Falcon1Dovetail_5106:HG4_Ill_SVrefine2DISCOVARDovetail_6128:HG4_Ill_MetaSV_5013:HG4_Ill_GATKHCSBGrefine_5886:HG3_PB_pbsv_8181:HG3_PB_SVrefine2Falcon1Dovetail_5089:HG3_Ill_SVrefine2DISCOVARDovetail_6289:HG3_Ill_MetaSV_4967:HG3_Ill_GATKHCSBGrefine_5710:HG2_PB_pbsv_8392:HG2_PB_SVrefine2PBcRplusDovetail_10385:HG2_PB_SVrefine2PB10Xhap12_6122:HG2_PB_SVrefine2Falcon2Bionano_4075:HG2_PB_SVrefine2Falcon1plusDovetail_11173:HG2_Ill_SpiralSDKrefine_16102:HG2_Ill_SVrefine2DISCOVARplusDovetail_12249:HG2_Ill_MetaSV_4788:HG2_Ill_GATKHCSBGrefine_5797:HG2_10X_SVrefine210Xhap12_5999;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5999:HG2_Ill_GATKHCSBGrefine_5797:HG2_Ill_MetaSV_4788:HG2_Ill_SVrefine2DISCOVARplusDovetail_12249:HG2_Ill_SpiralSDKrefine_16102:HG2_PB_SVrefine2Falcon1plusDovetail_11173:HG2_PB_SVrefine2Falcon2Bionano_4075:HG2_PB_SVrefine2PB10Xhap12_6122:HG2_PB_SVrefine2PBcRplusDovetail_10385:HG2_PB_pbsv_8392:HG3_Ill_GATKHCSBGrefine_5710:HG3_Ill_MetaSV_4967:HG3_Ill_SVrefine2DISCOVARDovetail_6289:HG3_PB_SVrefine2Falcon1Dovetail_5089:HG3_PB_pbsv_8181:HG4_Ill_GATKHCSBGrefine_5886:HG4_Ill_MetaSV_5013:HG4_Ill_SVrefine2DISCOVARDovetail_6128:HG4_PB_SVrefine2Falcon1Dovetail_5106:HG4_PB_SVrefine2PBcRDovetail_4150:HG4_PB_pbsv_8406;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00475254;ClusterMaxSizeDiff=0.00475254;ClusterMaxEditDist=0.00475254;PBcalls=14;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-6108;DistBack=23635;DistForward=-6094;DistMin=-6094;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:96475887-96482009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3750.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:97:./.:0:5:0:0:./.:0:0:0:0:1/1:0:27:1/1:0:376:6269:.:.
chr7	99089508	HG2_Ill_GATKHCSBGrefine_5808	TAACACAGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCAAGGCATGGTGGGGGTGCATGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATGGCATGAACCCGGGAGGTGGAGTTTGTAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAGAAAAAAAAAAAAAAAAAAAGAAATCAGCAAGTCATAAAACTGAACTCCTAGGCTCCTAGAATGGGAAAGAAAGAGGGACTATGCAAAATTAGGTTTTCTGGAAAGTGAAAAATAGAGTGCTTCTTTTGAGTACTGAGCTTTACCAGATCTTTTGGGGATTATGAAGTAGTTGAAACCCTCTCTACAATCTAAGGCCAAAGGCAAATTTTAAATGACTAAAATACATTCTTAGGCAAGTATTAATAATTGTAGTGAGCAAGATTTGGTTCAAAAGTGAATAAAAAGGCCGGGCATGGTGGCTCGTGTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGACTGCCTGAGCTTAGGAGTTCACCACCAGCCTAGGC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12261:HG2_PB_assemblyticsfalcon_25194:HG2_PB_SVrefine2Falcon1plusDovetail_11184:HG3_PB_pbsv_8198:HG2_PB_HySA_15420:HG2_PB_pbsv_8410:HG3_PB_HySA_12847:HG3_Ill_MetaSV_4972:HG2_Ill_tnscope_979:HG2_Ill_MetaSV_4792:HG2_Ill_GATKHCSBGrefine_5808:HG4_PB_SVrefine2Falcon1Dovetail_5119:HG2_PB_SVrefine2PBcRplusDovetail_10394:HG3_PB_SVrefine2PBcRDovetail_3801:HG2_PB_SVrefine2Falcon2Bionano_4087;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5808:HG2_Ill_MetaSV_4792:HG2_Ill_tnscope_979:HG3_Ill_MetaSV_4972:HG3_PB_HySA_12847;NumExactMatchSVs=5;ClusterMaxShiftDist=0.00529568;ClusterMaxSizeDiff=0.00528634;ClusterMaxEditDist=0.0952381;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-567;DistBack=44938;DistForward=-355;DistMin=-355;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=312;REFWIDENED=7:99089411-99090289;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3751.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:28:./.:19:16:8:6:./.:0:0:0:0:./.:30:2:0/1:40:8:.:.:.
chr7	101060891	HG4_Ill_Krunchall_12250	ATATATCTAGACATAGATATAGAGATATATCTCTATATCTAGACATAGATATAGAGATATATCTC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6013:HG4_PB_assemblyticsfalcon_24635:HG2_PB_HySA_15436:HG2_PB_pbsv_8426:HG4_Ill_svaba_10857:HG4_Ill_scalpel_8012:HG4_Ill_manta_2082:HG4_Ill_Krunchall_12250:HG4_Ill_GATKHC_13916:HG4_Ill_GATKHCSBGrefine_5906:HG4_Ill_250bpfermikitraw_11581:HG4_Ill_150bpfermikitraw_11107:HG3_Ill_svaba_10845:HG3_Ill_manta_1985:HG3_Ill_Krunchall_11647:HG3_Ill_GATKHC_13844:HG3_Ill_GATKHCSBGrefine_5729:HG3_Ill_250bpfermikitraw_11296:HG3_Ill_150bpfermikitraw_10991:HG2_Ill_svaba_10753:HG2_Ill_scalpel_8202:HG2_Ill_manta_2423:HG2_Ill_Krunchall_11933:HG2_Ill_GATKHC_13869:HG2_Ill_GATKHCSBGrefine_5817:HG2_Ill_250bpfermikitraw_11611:HG2_Ill_150bpfermikitraw_10927:HG4_PB_pbsv_8438:HG3_PB_pbsv_8213:HG4_PB_SVrefine2PBcRDovetail_4170:HG4_Ill_SVrefine2DISCOVARDovetail_6152:HG3_PB_SVrefine2Falcon1Dovetail_5113:HG3_Ill_SVrefine2DISCOVARDovetail_6306:HG2_PB_SVrefine2PBcRplusDovetail_10404:HG2_PB_SVrefine2PB10Xhap12_6143:HG2_PB_SVrefine2Falcon2Bionano_4099:HG2_PB_SVrefine2Falcon1plusDovetail_11196:HG2_Ill_SVrefine2DISCOVARplusDovetail_12268:HG4_PB_HySA_12439:HG3_PB_HySA_12859;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10927:HG2_Ill_250bpfermikitraw_11611:HG2_Ill_GATKHCSBGrefine_5817:HG2_Ill_GATKHC_13869:HG2_Ill_Krunchall_11933:HG2_Ill_manta_2423:HG2_Ill_scalpel_8202:HG2_Ill_svaba_10753:HG3_Ill_150bpfermikitraw_10991:HG3_Ill_250bpfermikitraw_11296:HG3_Ill_GATKHCSBGrefine_5729:HG3_Ill_GATKHC_13844:HG3_Ill_Krunchall_11647:HG3_Ill_manta_1985:HG3_Ill_svaba_10845:HG4_Ill_150bpfermikitraw_11107:HG4_Ill_250bpfermikitraw_11581:HG4_Ill_GATKHCSBGrefine_5906:HG4_Ill_GATKHC_13916:HG4_Ill_Krunchall_12250:HG4_Ill_manta_2082:HG4_Ill_scalpel_8012:HG4_Ill_svaba_10857;NumExactMatchSVs=23;ClusterMaxShiftDist=0.346667;ClusterMaxSizeDiff=0.346667;ClusterMaxEditDist=0.36;PBcalls=13;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=1;SVLEN=-64;DistBack=29853;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5279;REFWIDENED=7:101055655-101070671;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3752.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:37:./.:0:0:0:0:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr7	101334195	HG3_10X_allpass_1716	ACACCTGGCTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_596:HG2_PB_SVrefine2Falcon1plusDovetail_11197:HG4_10X_allpass_1665:HG4_PB_assemblyticsfalcon_24637:HG2_PB_assemblyticsfalcon_25215:HG3_PB_HySA_12863:HG3_Ill_Spiral_9108:HG3_PB_pbsv_8217:HG4_PB_HySA_12446:HG2_PB_HySA_15440:HG3_Ill_MetaSV_4980:HG2_Ill_tnscope_981:HG2_Ill_MetaSV_4798:HG4_PB_pbsv_8442:HG4_PB_SVrefine2PBcRDovetail_4171:HG4_PB_SVrefine2Falcon1Dovetail_5127:HG4_Ill_scalpel_8015:HG4_Ill_manta_2083:HG4_Ill_SVrefine2DISCOVARDovetail_6155:HG4_Ill_MetaSV_5024:HG4_Ill_GATKHCSBGrefine_5909:HG3_PB_SVrefine2PBcRDovetail_3811:HG3_PB_SVrefine2Falcon1Dovetail_5115:HG3_Ill_scalpel_8327:HG3_Ill_manta_1986:HG3_Ill_SVrefine2DISCOVARDovetail_6308:HG3_Ill_GATKHCSBGrefine_5734:HG3_10X_allpass_1716:HG2_PB_pbsv_8429:HG2_PB_SVrefine2PBcRplusDovetail_10406:HG2_PB_SVrefine2Falcon2Bionano_4101:HG2_Ill_scalpel_8205:HG2_Ill_manta_2426:HG2_Ill_SVrefine2DISCOVARplusDovetail_12270:HG2_10X_allpass_1426:HG2_10X_SVrefine210Xhap12_6015:HG4_Ill_Spiral_694;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6015:HG2_10X_allpass_1426:HG2_Ill_SVrefine2DISCOVARplusDovetail_12270:HG2_Ill_manta_2426:HG2_Ill_scalpel_8205:HG2_PB_SVrefine2Falcon2Bionano_4101:HG2_PB_SVrefine2PBcRplusDovetail_10406:HG2_PB_pbsv_8429:HG3_10X_allpass_1716:HG3_Ill_GATKHCSBGrefine_5734:HG3_Ill_SVrefine2DISCOVARDovetail_6308:HG3_Ill_manta_1986:HG3_Ill_scalpel_8327:HG3_PB_SVrefine2Falcon1Dovetail_5115:HG3_PB_SVrefine2PBcRDovetail_3811:HG4_Ill_GATKHCSBGrefine_5909:HG4_Ill_MetaSV_5024:HG4_Ill_SVrefine2DISCOVARDovetail_6155:HG4_Ill_manta_2083:HG4_Ill_scalpel_8015:HG4_PB_SVrefine2Falcon1Dovetail_5127:HG4_PB_SVrefine2PBcRDovetail_4171:HG4_PB_pbsv_8442;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0988836;ClusterMaxSizeDiff=0.0988836;ClusterMaxEditDist=0.100471;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-167;DistForward=-304;DistMin=-304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=7:101334196-101334531;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3753.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:0:19:2:19:./.:0:0:0:0:./.:0:7:./.:2:6:.:.:.
chr7	103463066	HG4_PB_SVrefine2PBcRDovetail_4180	TAAAGAATTACTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGTTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_599:HG4_PB_HySA_12469:HG2_PB_HySA_15469:HG2_PB_assemblyticsfalcon_25231:HG2_PB_assemblyticsPBcR_24453:HG4_PB_pbsv_8454:HG4_Ill_Krunchall_12268:HG3_Ill_Krunchall_11660:HG2_Ill_Krunchall_11948:HG2_PB_pbsv_8444:HG3_PB_pbsv_8233:HG3_PB_HySA_12898:HG4_Ill_MetaSV_5033:HG3_Ill_MetaSV_4989:HG2_Ill_tnscope_982:HG2_Ill_MetaSV_4806:HG4_PB_assemblyticsfalcon_24648:HG4_PB_SVrefine2PBcRDovetail_4180:HG4_PB_SVrefine2Falcon1Dovetail_5135:HG4_Ill_svaba_10874:HG4_Ill_scalpel_8026:HG4_Ill_manta_2087:HG4_Ill_SVrefine2DISCOVARDovetail_6168:HG4_Ill_GATKHCSBGrefine_5919:HG4_10X_allpass_1666:HG3_PB_assemblyticsfalcon_25072:HG3_PB_SVrefine2PBcRDovetail_3821:HG3_PB_SVrefine2Falcon1Dovetail_5127:HG3_Ill_svaba_10862:HG3_Ill_manta_1989:HG3_Ill_SVrefine2DISCOVARDovetail_6323:HG3_Ill_GATKHCSBGrefine_5747:HG3_10X_allpass_1719:HG2_PB_SVrefine2PBcRplusDovetail_10418:HG2_PB_SVrefine2PB10Xhap12_6154:HG2_PB_SVrefine2Falcon2Bionano_4109:HG2_PB_SVrefine2Falcon1plusDovetail_11206:HG2_Ill_svaba_10769:HG2_Ill_scalpel_8217:HG2_Ill_manta_2430:HG2_Ill_SVrefine2DISCOVARplusDovetail_12285:HG2_Ill_GATKHCSBGrefine_5829:HG2_10X_allpass_1429:HG2_10X_SVrefine210Xhap12_6027:HG2_Ill_breakscan11_1217:HG4_Ill_Spiral_696:HG3_Ill_Spiral_9115;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6027:HG2_10X_allpass_1429:HG2_Ill_GATKHCSBGrefine_5829:HG2_Ill_SVrefine2DISCOVARplusDovetail_12285:HG2_Ill_manta_2430:HG2_Ill_scalpel_8217:HG2_Ill_svaba_10769:HG2_PB_SVrefine2Falcon1plusDovetail_11206:HG2_PB_SVrefine2Falcon2Bionano_4109:HG2_PB_SVrefine2PB10Xhap12_6154:HG2_PB_SVrefine2PBcRplusDovetail_10418:HG3_10X_allpass_1719:HG3_Ill_GATKHCSBGrefine_5747:HG3_Ill_SVrefine2DISCOVARDovetail_6323:HG3_Ill_manta_1989:HG3_Ill_svaba_10862:HG3_PB_SVrefine2Falcon1Dovetail_5127:HG3_PB_SVrefine2PBcRDovetail_3821:HG3_PB_assemblyticsfalcon_25072:HG4_10X_allpass_1666:HG4_Ill_GATKHCSBGrefine_5919:HG4_Ill_SVrefine2DISCOVARDovetail_6168:HG4_Ill_manta_2087:HG4_Ill_scalpel_8026:HG4_Ill_svaba_10874:HG4_PB_SVrefine2Falcon1Dovetail_5135:HG4_PB_SVrefine2PBcRDovetail_4180:HG4_PB_assemblyticsfalcon_24648;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0851735;ClusterMaxSizeDiff=0.0851735;ClusterMaxEditDist=0.0851735;PBcalls=18;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=4681;DistForward=3377;DistMin=3377;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:103463067-103463402;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3754.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:0:19:2:25:./.:0:0:0:0:1/1:0:59:0/1:2:9:.:.:.
chr7	103799414	HG4_Ill_scalpel_8030	CGCAATCCTGGGTATATACCCAAAGGACTATAAATCACGCTGTTATAAAGACACATG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_8457:HG4_Ill_svaba_10878:HG4_Ill_scalpel_8030:HG4_Ill_manta_2088:HG4_Ill_Krunchall_12273:HG4_Ill_GATKHC_13942:HG4_Ill_GATKHCSBGrefine_5921:HG4_Ill_250bpfermikitraw_11603:HG4_Ill_150bpfermikitraw_11129:HG2_PB_pbsv_8447:HG2_Ill_svaba_10772:HG2_Ill_scalpel_8221:HG2_Ill_manta_2431:HG2_Ill_Krunchall_11952:HG2_Ill_GATKHC_13892:HG2_Ill_GATKHCSBGrefine_5831:HG2_Ill_250bpfermikitraw_11629:HG2_Ill_150bpfermikitraw_10945:HG4_PB_HySA_12474:HG2_PB_HySA_15475;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10945:HG2_Ill_250bpfermikitraw_11629:HG2_Ill_GATKHCSBGrefine_5831:HG2_Ill_GATKHC_13892:HG2_Ill_Krunchall_11952:HG2_Ill_manta_2431:HG2_Ill_scalpel_8221:HG2_Ill_svaba_10772:HG2_PB_pbsv_8447:HG4_Ill_150bpfermikitraw_11129:HG4_Ill_250bpfermikitraw_11603:HG4_Ill_GATKHCSBGrefine_5921:HG4_Ill_GATKHC_13942:HG4_Ill_Krunchall_12273:HG4_Ill_manta_2088:HG4_Ill_scalpel_8030:HG4_Ill_svaba_10878;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0353982;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=34584;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:103799413-103799471;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3755.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:41:./.:14:19:14:11:./.:0:0:0:0:0/1:27:19:./.:.:.:.:.:.
chr7	104070840	HG2_Ill_GATKHCSBGrefine_5833	ATATATATATATACATATATATATATACATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_8449:HG4_Ill_GATKHC_13946:HG4_Ill_GATKHCSBGrefine_5923:HG2_Ill_GATKHC_13895:HG2_Ill_GATKHCSBGrefine_5833:HG4_Ill_manta_2089:HG2_Ill_scalpel_8224;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5833:HG2_Ill_GATKHC_13895:HG4_Ill_GATKHCSBGrefine_5923:HG4_Ill_GATKHC_13946;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0246914;ClusterMaxSizeDiff=0.0246914;ClusterMaxEditDist=0.0745342;PBcalls=1;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-79;DistBack=-43;DistForward=-28;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:104070839-104070921;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9753;PctRecOverlap=0.9756;SizeDiff=-2;StartDistance=2;EndDistance=0;GTMatch=0;TruScore=97;MatchId=3756.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:0|1:31:1:2:25:./.:0:0:0:0:0/1:11:13:./.:.:.:.:.:.
chr7	104129515	HG2_Ill_GATKHCSBGrefine_5834	TGTGCTGAAATCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCATTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1218:HG3_PB_HySA_12902:HG4_PB_assemblyticsfalcon_24655:HG3_PB_assemblyticsfalcon_25078:HG2_PB_assemblyticsfalcon_25238:HG2_PB_assemblyticsPBcR_24461:HG4_Ill_Krunchall_12275:HG3_Ill_Krunchall_11665:HG2_PB_pbsv_8450:HG2_Ill_Krunchall_11955:HG4_PB_pbsv_8459:HG3_PB_pbsv_8235:HG4_PB_HySA_12477:HG2_PB_HySA_15481:HG2_Ill_tnscope_983:HG2_Ill_MetaSV_4808:HG4_PB_SVrefine2PBcRDovetail_4182:HG4_PB_SVrefine2Falcon1Dovetail_5137:HG4_Ill_scalpel_8033:HG4_Ill_MetaSV_5034:HG4_Ill_GATKHCSBGrefine_5924:HG4_10X_allpass_1667:HG3_PB_SVrefine2PBcRDovetail_3823:HG3_PB_SVrefine2Falcon1Dovetail_5129:HG3_Ill_scalpel_8344:HG3_Ill_manta_1990:HG3_Ill_SVrefine2DISCOVARDovetail_6326:HG3_Ill_GATKHCSBGrefine_5748:HG3_10X_allpass_1720:HG2_PB_SVrefine2PBcRplusDovetail_10421:HG2_PB_SVrefine2PB10Xhap12_6157:HG2_PB_SVrefine2Falcon2Bionano_4113:HG2_PB_SVrefine2Falcon1plusDovetail_11209:HG2_Ill_scalpel_8225:HG2_Ill_manta_2432:HG2_Ill_SpiralSDKrefine_16142:HG2_Ill_SVrefine2DISCOVARplusDovetail_12290:HG2_Ill_GATKHCSBGrefine_5834:HG2_10X_allpass_1431:HG2_10X_SVrefine210Xhap12_6031;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6031:HG2_10X_allpass_1431:HG2_Ill_GATKHCSBGrefine_5834:HG2_Ill_SVrefine2DISCOVARplusDovetail_12290:HG2_Ill_SpiralSDKrefine_16142:HG2_Ill_manta_2432:HG2_Ill_scalpel_8225:HG2_PB_SVrefine2Falcon1plusDovetail_11209:HG2_PB_SVrefine2Falcon2Bionano_4113:HG2_PB_SVrefine2PB10Xhap12_6157:HG2_PB_SVrefine2PBcRplusDovetail_10421:HG3_10X_allpass_1720:HG3_Ill_GATKHCSBGrefine_5748:HG3_Ill_SVrefine2DISCOVARDovetail_6326:HG3_Ill_manta_1990:HG3_Ill_scalpel_8344:HG3_PB_SVrefine2Falcon1Dovetail_5129:HG3_PB_SVrefine2PBcRDovetail_3823:HG4_10X_allpass_1667:HG4_Ill_GATKHCSBGrefine_5924:HG4_Ill_MetaSV_5034:HG4_Ill_scalpel_8033:HG4_PB_SVrefine2Falcon1Dovetail_5137:HG4_PB_SVrefine2PBcRDovetail_4182;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0905797;ClusterMaxSizeDiff=0.0905797;ClusterMaxEditDist=0.0905797;PBcalls=18;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-281;DistBack=-487;DistForward=15632;DistMin=-487;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=7:104129516-104129809;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:1:26:1:29:./.:0:0:0:0:1/1:0:41:./.:.:.:.:.:.
chr7	104187384	HG2_PB_pbsv_8451	TAAGAAATAGTAGCTCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6158:HG2_10X_allpass_1432:HG4_Ill_Krunchall_12276:HG2_Ill_Krunchall_11956:HG2_PB_assemblyticsPBcR_24462:HG4_PB_assemblyticsfalcon_24656:HG3_PB_assemblyticsfalcon_25079:HG4_Ill_Spiral_697:HG4_PB_HySA_12478:HG4_PB_pbsv_8460:HG4_Ill_MetaSV_5035:HG2_Ill_tnscope_984:HG4_PB_SVrefine2PBcRDovetail_4183:HG4_PB_SVrefine2Falcon1Dovetail_5138:HG4_Ill_GATKHCSBGrefine_5925:HG4_10X_allpass_1668:HG3_PB_SVrefine2Falcon1Dovetail_5130:HG2_PB_pbsv_8451:HG2_PB_SVrefine2PBcRplusDovetail_10422:HG2_PB_SVrefine2PB10Xhap12_6159:HG2_PB_PB10Xdip_26277:HG2_Ill_manta_2433:HG2_Ill_MetaSV_4809:HG2_Ill_GATKHCSBGrefine_5835:HG2_10X_SVrefine210Xhap12_6032:HG2_PB_PB10Xdip_26278:HG2_Ill_breakscan11_1219:HG2_Ill_Spiral_600;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6032:HG2_Ill_GATKHCSBGrefine_5835:HG2_Ill_MetaSV_4809:HG2_Ill_manta_2433:HG2_PB_PB10Xdip_26277:HG2_PB_SVrefine2PB10Xhap12_6159:HG2_PB_SVrefine2PBcRplusDovetail_10422:HG2_PB_pbsv_8451:HG3_PB_SVrefine2Falcon1Dovetail_5130:HG4_10X_allpass_1668:HG4_Ill_GATKHCSBGrefine_5925:HG4_PB_SVrefine2Falcon1Dovetail_5138:HG4_PB_SVrefine2PBcRDovetail_4183;NumExactMatchSVs=13;ClusterMaxShiftDist=0.210667;ClusterMaxSizeDiff=0.210667;ClusterMaxEditDist=0.210667;PBcalls=14;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=13;DistForward=38227;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=7:104187385-104187732;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3758.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:0|1:38:7:1:17:./.:0:0:0:0:0/1:21:34:0/1:21:9:.:.:.
chr7	104590132	HG3_10X_allpass_1721	AGGCCAAGACGGGTGAATCGCTTGAGCCCAGGAGCTCGAGACCAGCCTGGGCAACATGGTGAAACCCCATCTCTATAAAAAATAAAAAGTTTAACTTGGTGTAGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6033:HG2_PB_HySA_15491:HG2_PB_assemblyticsfalcon_25240:HG2_PB_assemblyticsPBcR_24464:HG2_Ill_Krunchall_11960:HG3_PB_pbsv_8240:HG3_Ill_svaba_10871:HG3_Ill_MetaSV_4992:HG3_Ill_GATKHC_13879:HG3_Ill_GATKHCSBGrefine_5753:HG3_10X_allpass_1721:HG2_PB_pbsv_8456:HG2_PB_SVrefine2PBcRplusDovetail_10425:HG2_PB_SVrefine2PB10Xhap12_6163:HG2_PB_SVrefine2Falcon2Bionano_4116:HG2_PB_SVrefine2Falcon1plusDovetail_11212:HG2_Ill_svaba_10782:HG2_Ill_manta_2436:HG2_Ill_SpiralSDKrefine_16144:HG2_Ill_MetaSV_4810:HG2_Ill_GATKHC_13902:HG2_Ill_GATKHCSBGrefine_5838:HG2_10X_allpass_1433;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6033:HG3_PB_pbsv_8240:HG3_Ill_svaba_10871:HG3_Ill_MetaSV_4992:HG3_Ill_GATKHC_13879:HG3_Ill_GATKHCSBGrefine_5753:HG3_10X_allpass_1721:HG2_PB_pbsv_8456:HG2_PB_SVrefine2PBcRplusDovetail_10425:HG2_PB_SVrefine2PB10Xhap12_6163:HG2_PB_SVrefine2Falcon2Bionano_4116:HG2_PB_SVrefine2Falcon1plusDovetail_11212:HG2_Ill_svaba_10782:HG2_Ill_manta_2436:HG2_Ill_SpiralSDKrefine_16144:HG2_Ill_MetaSV_4810:HG2_Ill_GATKHC_13902:HG2_Ill_GATKHCSBGrefine_5838:HG2_10X_allpass_1433;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.038835;PBcalls=9;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-104;DistBack=21135;DistForward=23380;DistMin=21135;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=7:104590133-104590239;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3759.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:22:0|1:18:1:1:25:./.:0:0:0:0:0/1:36:17:./.:.:.:.:.:.
chr7	104990195	HG2_PB_SVrefine2PB10Xhap12_6164	CTTTTTTTTTGAGCTGGAGTCTCGCTCTGTCGCCAGGCTGGTGTGCAGTGCCGTGATCTCAGCTCACCGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGCATAGCTGGGATTACAGGCACATGCCACCACACCTGGCTAATTTTTGTATTCTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAGGATGATCTCAATCTCCTGAACTTGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGCCAAACAGTGCCTGTCTTAATACAGCAGGCATTATGCTAAATATATCACCTGAATTTTTACTTAATCCTCACAATAACCCTGTAGTTGCTATAATTTTTTTTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6037:HG3_PB_HySA_12907:HG2_PB_HySA_15493:HG2_PB_pbsv_8458:HG3_Ill_GATKHCSBGrefine_5755:HG3_10X_allpass_1722:HG2_Ill_MetaSV_4811:HG2_Ill_GATKHCSBGrefine_5839:HG2_10X_allpass_1434:HG3_PB_pbsv_8242:HG2_Ill_tnscope_986:HG3_PB_SVrefine2PBcRDovetail_3827:HG3_PB_SVrefine2Falcon1Dovetail_5138:HG3_Ill_SVrefine2DISCOVARDovetail_6329:HG2_PB_SVrefine2PB10Xhap12_6164:HG2_PB_SVrefine2Falcon2Bionano_4117:HG2_PB_SVrefine2Falcon1plusDovetail_11214;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6037:HG3_PB_SVrefine2PBcRDovetail_3827:HG3_PB_SVrefine2Falcon1Dovetail_5138:HG3_Ill_SVrefine2DISCOVARDovetail_6329:HG2_PB_SVrefine2PB10Xhap12_6164:HG2_PB_SVrefine2Falcon2Bionano_4117:HG2_PB_SVrefine2Falcon1plusDovetail_11214;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0127389;ClusterMaxSizeDiff=0.0127389;ClusterMaxEditDist=0.0766283;PBcalls=9;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-389;DistBack=-525;DistForward=-264;DistMin=-525;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=643;REFWIDENED=7:104990196-104991227;PctSeqSimilarity=0.8918;PctSizeSimilarity=0.9898;PctRecOverlap=0.6574;SizeDiff=-4;StartDistance=-131;EndDistance=-135;GTMatch=0;TruScore=84;MatchId=3760.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:20:./.:18:16:7:3:./.:0:0:0:0:0/0:67:1:./.:50:4:.:.:.
chr7	104992295	HG2_Ill_250bpfermikitraw_11637	ACCCAGTCTCAGAAATTCAGTTACTGCAACAGTAAACAGACTAAGACACCCTTATAATCCACTGTAAAGCAGGCTGTGCAGTTTGATGATC	A	20	PASS	ClusterIDs=HG4_Ill_Spiral_698:HG3_PB_HySA_12908:HG4_PB_HySA_12490:HG3_Ill_Spiral_9121:HG2_PB_HySA_15494:HG2_Ill_Spiral_601:HG4_PB_pbsv_8466:HG3_PB_pbsv_8243:HG3_PB_assemblyticsfalcon_25087:HG2_PB_pbsv_8459:HG4_PB_SVrefine2PBcRDovetail_4187:HG4_PB_SVrefine2Falcon1Dovetail_5142:HG4_Ill_manta_2091:HG4_Ill_SVrefine2DISCOVARDovetail_6175:HG4_Ill_GATKHCSBGrefine_5930:HG4_Ill_250bpfermikitraw_11611:HG4_Ill_150bpfermikitraw_11138:HG4_10X_allpass_1669:HG3_PB_SVrefine2PBcRDovetail_3828:HG3_PB_SVrefine2Falcon1Dovetail_5139:HG3_Ill_SVrefine2DISCOVARDovetail_6330:HG3_Ill_GATKHCSBGrefine_5756:HG3_Ill_250bpfermikitraw_11322:HG3_Ill_150bpfermikitraw_11007:HG2_PB_SVrefine2PBcRplusDovetail_10427:HG2_PB_SVrefine2PB10Xhap12_6165:HG2_PB_SVrefine2Falcon2Bionano_4118:HG2_PB_SVrefine2Falcon1plusDovetail_11215:HG2_Ill_manta_2437:HG2_Ill_SpiralSDKrefine_16145:HG2_Ill_SVrefine2DISCOVARplusDovetail_12295:HG2_Ill_GATKHCSBGrefine_5840:HG2_Ill_250bpfermikitraw_11637:HG2_Ill_150bpfermikitraw_10951:HG2_10X_SVrefine210Xhap12_6038;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6038:HG2_Ill_150bpfermikitraw_10951:HG2_Ill_250bpfermikitraw_11637:HG2_Ill_GATKHCSBGrefine_5840:HG2_Ill_SVrefine2DISCOVARplusDovetail_12295:HG2_Ill_SpiralSDKrefine_16145:HG2_Ill_manta_2437:HG2_PB_SVrefine2Falcon1plusDovetail_11215:HG2_PB_SVrefine2Falcon2Bionano_4118:HG2_PB_SVrefine2PB10Xhap12_6165:HG2_PB_SVrefine2PBcRplusDovetail_10427:HG3_Ill_150bpfermikitraw_11007:HG3_Ill_250bpfermikitraw_11322:HG3_Ill_GATKHCSBGrefine_5756:HG3_Ill_SVrefine2DISCOVARDovetail_6330:HG3_PB_SVrefine2Falcon1Dovetail_5139:HG3_PB_SVrefine2PBcRDovetail_3828:HG4_10X_allpass_1669:HG4_Ill_150bpfermikitraw_11138:HG4_Ill_250bpfermikitraw_11611:HG4_Ill_GATKHCSBGrefine_5930:HG4_Ill_SVrefine2DISCOVARDovetail_6175:HG4_Ill_manta_2091:HG4_PB_SVrefine2Falcon1Dovetail_5142:HG4_PB_SVrefine2PBcRDovetail_4187;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0674157;ClusterMaxSizeDiff=0.0674157;ClusterMaxEditDist=0.0681818;PBcalls=15;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-90;DistBack=-91;DistForward=-1;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=91;REFWIDENED=7:104992296-104992476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3761.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:7:34:1/1:4:25:1:6:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr7	105153984	HG2_PB_SVrefine2PBcRplusDovetail_10430	GGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCGCCAAGGCAGGCCGGATCACGAAGTCAGGAGATCGAGACCAACCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGTGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCGGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAATAGTTATTATGGATGATTTACATAGCTGAACTGTATTGTTGTTATGTCTGGAGGAGTTTAAAAAAAGAAAAAAAGCT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12297:HG2_PB_pbsv_8463:HG3_PB_SVrefine2Falcon1Dovetail_5141:HG2_PB_SVrefine2PBcRplusDovetail_10430:HG2_PB_SVrefine2PB10Xhap12_6167:HG2_PB_SVrefine2Falcon2Bionano_4122:HG2_PB_SVrefine2Falcon1plusDovetail_11217;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12297:HG3_PB_SVrefine2Falcon1Dovetail_5141:HG2_PB_SVrefine2PBcRplusDovetail_10430:HG2_PB_SVrefine2PB10Xhap12_6167:HG2_PB_SVrefine2Falcon2Bionano_4122:HG2_PB_SVrefine2Falcon1plusDovetail_11217;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0127714;ClusterMaxSizeDiff=0.0127714;ClusterMaxEditDist=0.0153257;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-393;DistBack=-6942;DistForward=-83;DistMin=-6942;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=0/0;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=454;REFWIDENED=7:105153985-105154831;PctSeqSimilarity=0.995;PctSizeSimilarity=0.9949;PctRecOverlap=0.2374;SizeDiff=-2;StartDistance=-300;EndDistance=-302;GTMatch=0;TruScore=74;MatchId=3762.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:18:0|1:27:0:2:16:./.:0:0:0:0:./.:27:2:./.:15:1:.:.:.
chr7	105733990	HG2_Ill_manta_2439	GCACCCCAATCCTAAAACTCCTTTGACCCCACCAAGACCTACAATCTGATCCTACTGCTTTCTTACTGTATCACCACTTCACTAATGTCCTCACTTATTTTAATCAATTTCTGTTCTAAGGGCCTTCATTATCATCTCTTGCACATACTCTCAACTCACTTATCCTTCTTCTGCAAAACTCTAACTTTAGTTAAACCAAATTCTCCATGAGATGGATAATAAAATGGTGAAAAGCACACACCAGAATGGTATCTCTTTTAAATTTCCTAACCACAAATTTTAAGAATGCTCACTATATTAAGAAAAAGGCAACAACAAAAATCTCCCAAGACACCTTAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6046:HG2_PB_SVrefine2PBcRplusDovetail_10436:HG2_10X_allpass_1435:HG2_PB_assemblyticsPBcR_24477:HG2_PB_assemblyticsfalcon_25251:HG3_PB_HySA_12916:HG4_Ill_Krunchall_12288:HG4_PB_pbsv_8475:HG4_Ill_MetaSV_5039:HG3_Ill_MetaSV_4998:HG2_Ill_tnscope_989:HG4_PB_SVrefine2Falcon1Dovetail_5149:HG4_Ill_svaba_10893:HG4_Ill_manta_2092:HG4_Ill_GATKHCSBGrefine_5934:HG4_Ill_Cortex_3491:HG4_10X_allpass_1670:HG3_PB_pbsv_8253:HG3_PB_SVrefine2Falcon1Dovetail_5149:HG3_Ill_svaba_10878:HG3_Ill_scalpel_8351:HG3_Ill_manta_1994:HG3_Ill_SVrefine2DISCOVARDovetail_6335:HG3_Ill_GATKHCSBGrefine_5761:HG3_Ill_Cortex_3510:HG3_10X_allpass_1723:HG2_PB_pbsv_8469:HG2_PB_SVrefine2PB10Xhap12_6176:HG2_PB_SVrefine2Falcon1plusDovetail_11222:HG2_Ill_svaba_10789:HG2_Ill_manta_2439:HG2_Ill_SpiralSDKrefine_16152:HG2_Ill_SVrefine2DISCOVARplusDovetail_12300:HG2_Ill_MetaSV_4814:HG2_Ill_GATKHCSBGrefine_5845:HG2_Ill_Cortex_8486;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6046:HG4_PB_SVrefine2Falcon1Dovetail_5149:HG4_Ill_svaba_10893:HG4_Ill_manta_2092:HG4_Ill_GATKHCSBGrefine_5934:HG4_Ill_Cortex_3491:HG4_10X_allpass_1670:HG3_PB_pbsv_8253:HG3_PB_SVrefine2Falcon1Dovetail_5149:HG3_Ill_svaba_10878:HG3_Ill_scalpel_8351:HG3_Ill_manta_1994:HG3_Ill_SVrefine2DISCOVARDovetail_6335:HG3_Ill_GATKHCSBGrefine_5761:HG3_Ill_Cortex_3510:HG3_10X_allpass_1723:HG2_PB_pbsv_8469:HG2_PB_SVrefine2PB10Xhap12_6176:HG2_PB_SVrefine2Falcon1plusDovetail_11222:HG2_Ill_svaba_10789:HG2_Ill_manta_2439:HG2_Ill_SpiralSDKrefine_16152:HG2_Ill_SVrefine2DISCOVARplusDovetail_12300:HG2_Ill_MetaSV_4814:HG2_Ill_GATKHCSBGrefine_5845:HG2_Ill_Cortex_8486;NumExactMatchSVs=26;ClusterMaxShiftDist=0.127407;ClusterMaxSizeDiff=0.127407;ClusterMaxEditDist=0.127407;PBcalls=11;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-338;DistBack=-349;DistForward=-335;DistMin=-349;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=7:105733991-105734331;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3763.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:./.:18:12:12:15:./.:0:0:0:0:0/1:60:28:0/1:31:14:.:.:.
chr7	107410585	HG2_PB_SVrefine2PBcRplusDovetail_10440	CTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5156:HG4_Ill_GATKHCSBGrefine_5936:HG4_PB_pbsv_8482:HG3_PB_pbsv_8260:HG2_PB_pbsv_8477:HG3_PB_HySA_12931:HG2_PB_HySA_15524:HG4_PB_SVrefine2PBcRDovetail_4199:HG4_PB_HySA_12510:HG3_PB_SVrefine2PBcRDovetail_3838:HG2_PB_SVrefine2PBcRplusDovetail_10440:HG2_PB_SVrefine2PB10Xhap12_6181:HG2_PB_SVrefine2Falcon1plusDovetail_11227;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6181:HG2_PB_SVrefine2PBcRplusDovetail_10440:HG3_PB_SVrefine2PBcRDovetail_3838;NumExactMatchSVs=3;ClusterMaxShiftDist=0.206897;ClusterMaxSizeDiff=0.206897;ClusterMaxEditDist=0.310345;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-87;DistBack=31;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=42;REFWIDENED=7:107410586-107410714;PctSeqSimilarity=0.9766;PctSizeSimilarity=1;PctRecOverlap=0.8523;SizeDiff=0;StartDistance=-13;EndDistance=-13;GTMatch=1;TruScore=94;MatchId=3764.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:3:34:1:22:./.:0:0:0:0:./.:4:4:./.:.:.:.:.:.
chr7	107524255	HG2_Ill_GATKHC_13930	AAAAAAAAAGGAGTGAGGGCATGGAAAACATACAGCACACCAATAAAACAAAATATCAAAAACACAAAAAAACAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_8479:HG2_10X_allpass_1436:HG4_PB_pbsv_8483:HG4_PB_assemblyticsfalcon_24687:HG4_PB_HySA_12511:HG4_Ill_GATKHC_13973:HG2_Ill_scalpel_8243:HG2_Ill_GATKHC_13930:HG2_Ill_GATKHCSBGrefine_5850;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5850:HG2_Ill_GATKHC_13930:HG2_Ill_scalpel_8243:HG4_Ill_GATKHC_13973;NumExactMatchSVs=4;ClusterMaxShiftDist=0.112676;ClusterMaxSizeDiff=0.112676;ClusterMaxEditDist=0.15942;PBcalls=4;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=-74;DistBack=27434;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=22;REFWIDENED=7:107524238-107524333;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3765.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:19:./.:13:12:16:5:./.:0:0:0:0:0/1:8:4:./.:.:.:.:.:.
chr7	107529120	HG2_Ill_GATKHCSBGrefine_5851	GTCTAGCTCAAGGTTTGTAAATGCACCAATTAGCACTCTGTGTCTAGCTAATCTGGTGGGGAATTGGAGAATCTTTACGTCTAGCTAAGGGATTGTGAATGCACCAATCGTCACTCTGTA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12312:HG3_PB_HySA_12933:HG2_PB_HySA_15526:HG2_PB_pbsv_8480:HG3_PB_pbsv_8262:HG3_Ill_MetaSV_4999:HG3_Ill_scalpel_8364:HG3_Ill_manta_1995:HG3_Ill_GATKHC_13903:HG3_Ill_GATKHCSBGrefine_5766:HG3_10X_allpass_1724:HG2_PB_assemblyticsfalcon_25268:HG2_PB_SVrefine2Falcon1plusDovetail_11228:HG2_Ill_GATKHC_13931:HG2_Ill_GATKHCSBGrefine_5851:HG2_10X_allpass_1437:HG3_PB_SVrefine2PBcRDovetail_3839:HG3_Ill_SVrefine2DISCOVARDovetail_6346:HG2_PB_SVrefine2PBcRplusDovetail_10441:HG2_PB_SVrefine2PB10Xhap12_6182:HG2_PB_SVrefine2Falcon2Bionano_4132;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_1437:HG2_Ill_GATKHCSBGrefine_5851:HG2_Ill_GATKHC_13931:HG2_PB_SVrefine2Falcon1plusDovetail_11228:HG2_PB_assemblyticsfalcon_25268:HG3_10X_allpass_1724:HG3_Ill_GATKHCSBGrefine_5766:HG3_Ill_GATKHC_13903:HG3_Ill_manta_1995:HG3_Ill_scalpel_8364;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0166667;ClusterMaxSizeDiff=0.0166667;ClusterMaxEditDist=0.175732;PBcalls=10;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-119;DistBack=-48;DistForward=-101;DistMin=-101;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=208;REFWIDENED=7:107528961-107529287;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3766.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:35:./.:17:16:4:19:./.:0:0:0:0:0/1:35:20:./.:.:.:.:.:.
chr7	107818086	HG3_Ill_Krunchall_11693	ATATATATATATATATATATGTATATACGTGTATATATATACGTGTATATATATATACACGTATATATATATATACGTGTGTATATATATATAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_8266:HG4_PB_HySA_12514:HG2_Ill_SpiralSDKrefine_16165:HG4_PB_assemblyticsfalcon_24691:HG4_PB_SVrefine2PBcRDovetail_4201:HG4_PB_SVrefine2Falcon1Dovetail_5157:HG4_Ill_SVrefine2DISCOVARDovetail_6192:HG4_CG_vcfBeta_5573:HG3_PB_assemblyticsfalcon_25119:HG3_PB_SVrefine2Falcon1Dovetail_5157:HG2_PB_SVrefine2PBcRplusDovetail_10443:HG2_PB_SVrefine2PB10Xhap12_6185:HG2_PB_SVrefine2Falcon2Bionano_4134:HG2_PB_SVrefine2Falcon1plusDovetail_11230:HG2_Ill_manta_2441:HG2_Ill_SVrefine2DISCOVARplusDovetail_12315:HG2_CG_vcfBeta_4965:HG2_10X_SVrefine210Xhap12_6052:HG4_Ill_svaba_10911:HG4_Ill_scalpel_8045:HG4_Ill_Krunchall_12301:HG4_Ill_GATKHC_13978:HG4_Ill_GATKHCSBGrefine_5939:HG4_Ill_250bpfermikitraw_11631:HG4_Ill_150bpfermikitraw_11156:HG4_10X_allpass_1671:HG3_Ill_svaba_10895:HG3_Ill_scalpel_8365:HG3_Ill_Krunchall_11693:HG3_Ill_GATKHC_13905:HG3_Ill_GATKHCSBGrefine_5769:HG3_Ill_250bpfermikitraw_11346:HG3_Ill_150bpfermikitraw_11030:HG3_10X_allpass_1725:HG2_Ill_svaba_10807:HG2_Ill_scalpel_8245:HG2_Ill_Krunchall_11981:HG2_Ill_GATKHC_13936:HG2_Ill_GATKHCSBGrefine_5853:HG2_Ill_250bpfermikitraw_11658:HG2_Ill_150bpfermikitraw_10975:HG4_Ill_Spiral_700:HG3_Ill_Spiral_9145:HG2_Ill_Spiral_603:HG4_PB_pbsv_8487:HG2_PB_assemblyticsfalcon_25272:HG2_PB_assemblyticsPBcR_24494:HG2_PB_pbsv_8484;NumClusterSVs=48;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10975:HG2_Ill_250bpfermikitraw_11658:HG2_Ill_GATKHCSBGrefine_5853:HG2_Ill_GATKHC_13936:HG2_Ill_Krunchall_11981:HG2_Ill_scalpel_8245:HG2_Ill_svaba_10807:HG3_10X_allpass_1725:HG3_Ill_150bpfermikitraw_11030:HG3_Ill_250bpfermikitraw_11346:HG3_Ill_GATKHCSBGrefine_5769:HG3_Ill_GATKHC_13905:HG3_Ill_Krunchall_11693:HG3_Ill_scalpel_8365:HG3_Ill_svaba_10895:HG4_10X_allpass_1671:HG4_Ill_150bpfermikitraw_11156:HG4_Ill_250bpfermikitraw_11631:HG4_Ill_GATKHCSBGrefine_5939:HG4_Ill_GATKHC_13978:HG4_Ill_Krunchall_12301:HG4_Ill_scalpel_8045:HG4_Ill_svaba_10911;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0326087;ClusterMaxSizeDiff=0.0215054;ClusterMaxEditDist=0.12766;PBcalls=15;Illcalls=28;TenXcalls=3;CGcalls=2;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=2;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=16;NumTechs=4;NumTechsExact=2;SVLEN=-93;DistBack=-14;DistForward=11069;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:107818087-107818179;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3767.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:./.:0:0:0:0:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr7	108352846	HG2_Ill_scalpel_8250	CAAGAGGAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGCCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1220:HG4_10X_allpass_1672:HG2_Ill_Krunchall_11985:HG3_Ill_Krunchall_11697:HG2_PB_assemblyticsfalcon_25277:HG2_PB_assemblyticsPBcR_24499:HG4_PB_assemblyticsfalcon_24693:HG3_PB_assemblyticsfalcon_25123:HG3_10X_allpass_1726:HG2_PB_HySA_15535:HG4_PB_pbsv_8489:HG4_Ill_MetaSV_5040:HG3_Ill_MetaSV_5000:HG2_Ill_tnscope_990:HG2_Ill_MetaSV_4815:HG4_PB_SVrefine2PBcRDovetail_4202:HG4_PB_SVrefine2Falcon1Dovetail_5158:HG4_Ill_manta_2094:HG4_Ill_GATKHCSBGrefine_5940:HG3_PB_pbsv_8269:HG3_PB_SVrefine2Falcon1Dovetail_5160:HG3_Ill_manta_1997:HG3_Ill_SVrefine2DISCOVARDovetail_6347:HG3_Ill_GATKHCSBGrefine_5771:HG2_PB_pbsv_8487:HG2_PB_SVrefine2PB10Xhap12_6188:HG2_PB_SVrefine2Falcon1plusDovetail_11232:HG2_Ill_scalpel_8250:HG2_Ill_manta_2442:HG2_Ill_SVrefine2DISCOVARplusDovetail_12317:HG2_Ill_GATKHCSBGrefine_5855:HG2_10X_allpass_1438:HG2_10X_SVrefine210Xhap12_6053;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6053:HG2_10X_allpass_1438:HG2_Ill_GATKHCSBGrefine_5855:HG2_Ill_SVrefine2DISCOVARplusDovetail_12317:HG2_Ill_manta_2442:HG2_Ill_scalpel_8250:HG2_PB_SVrefine2Falcon1plusDovetail_11232:HG2_PB_SVrefine2PB10Xhap12_6188:HG2_PB_pbsv_8487:HG3_Ill_GATKHCSBGrefine_5771:HG3_Ill_SVrefine2DISCOVARDovetail_6347:HG3_Ill_manta_1997:HG3_PB_SVrefine2Falcon1Dovetail_5160:HG3_PB_pbsv_8269:HG4_Ill_GATKHCSBGrefine_5940:HG4_Ill_manta_2094:HG4_PB_SVrefine2Falcon1Dovetail_5158:HG4_PB_SVrefine2PBcRDovetail_4202;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0978593;ClusterMaxSizeDiff=0.0978593;ClusterMaxEditDist=0.0978593;PBcalls=13;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=20013;DistForward=38343;DistMin=20013;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=7:108352847-108353182;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3768.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:81:1/1:7:33:1:35:./.:0:0:0:0:1/1:0:34:0/1:2:18:.:.:.
chr7	108501444	HG2_Ill_GATKHC_13946	GCTTGATTTAATCTAGGTAATTCAGAAGTAATCTAGCCTCTGAATTTTTCTGTGTTTGTTTTGCTTCATTTGTTTACGAGGGAGTGAATCTTCATCCTAATC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_8490:HG2_PB_HySA_15537:HG2_PB_assemblyticsPBcR_24501:HG3_PB_assemblyticsfalcon_25125:HG3_PB_HySA_12939:HG4_Ill_svaba_10918:HG4_Ill_manta_2095:HG4_Ill_MetaSV_5041:HG4_Ill_GATKHC_13986:HG4_Ill_GATKHCSBGrefine_5941:HG4_Ill_Cortex_3498:HG4_CG_vcfBeta_5579:HG4_10X_allpass_1673:HG3_PB_pbsv_8270:HG3_PB_SVrefine2Falcon1Dovetail_5161:HG3_Ill_svaba_10900:HG3_Ill_scalpel_8370:HG3_Ill_manta_1998:HG3_Ill_SVrefine2DISCOVARDovetail_6349:HG3_Ill_MetaSV_5001:HG3_Ill_GATKHC_13912:HG3_Ill_GATKHCSBGrefine_5772:HG3_Ill_Cortex_3517:HG3_Ill_250bpfermikitraw_11351:HG3_Ill_150bpfermikitraw_11035:HG3_CG_vcfBeta_4739:HG3_10X_allpass_1727:HG2_PB_pbsv_8489:HG2_PB_SVrefine2PB10Xhap12_6189:HG2_Ill_svaba_10813:HG2_Ill_manta_2443:HG2_Ill_breakscan11_1221:HG2_Ill_SpiralSDKrefine_16169:HG2_Ill_MetaSV_4816:HG2_Ill_GATKHC_13946:HG2_Ill_GATKHCSBGrefine_5856:HG2_Ill_Cortex_8500:HG2_CG_vcfBeta_4970:HG2_10X_SVrefine210Xhap12_6054:HG4_Ill_Krunchall_12308:HG3_Ill_Krunchall_11700;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6054:HG2_CG_vcfBeta_4970:HG2_Ill_Cortex_8500:HG2_Ill_GATKHCSBGrefine_5856:HG2_Ill_GATKHC_13946:HG2_Ill_MetaSV_4816:HG2_Ill_SpiralSDKrefine_16169:HG2_Ill_breakscan11_1221:HG2_Ill_manta_2443:HG2_Ill_svaba_10813:HG2_PB_SVrefine2PB10Xhap12_6189:HG2_PB_pbsv_8489:HG3_10X_allpass_1727:HG3_CG_vcfBeta_4739:HG3_Ill_150bpfermikitraw_11035:HG3_Ill_250bpfermikitraw_11351:HG3_Ill_Cortex_3517:HG3_Ill_GATKHCSBGrefine_5772:HG3_Ill_GATKHC_13912:HG3_Ill_MetaSV_5001:HG3_Ill_SVrefine2DISCOVARDovetail_6349:HG3_Ill_manta_1998:HG3_Ill_scalpel_8370:HG3_Ill_svaba_10900:HG3_PB_SVrefine2Falcon1Dovetail_5161:HG3_PB_pbsv_8270:HG4_10X_allpass_1673:HG4_CG_vcfBeta_5579:HG4_Ill_Cortex_3498:HG4_Ill_GATKHCSBGrefine_5941:HG4_Ill_GATKHC_13986:HG4_Ill_MetaSV_5041:HG4_Ill_manta_2095:HG4_Ill_svaba_10918;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0295567;ClusterMaxSizeDiff=0.0295567;ClusterMaxEditDist=0.029703;PBcalls=9;Illcalls=26;TenXcalls=3;CGcalls=3;PBexactcalls=4;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=3;HG2count=14;HG3count=17;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-101;DistBack=13303;DistForward=19201;DistMin=13303;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:108501445-108501547;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:44:./.:11:26:15:19:./.:0:0:0:0:0/1:40:24:./.:.:.:.:.:.
chr7	108884718	HG4_Ill_svaba_10924	TAAAAAGTAATAGACATACTTTTTGTAACATAAAGTTTTGTCTAGTCTCTCACCCAACAGTTTCCATAAAAGTCTCTGGTCTTTCACCAAAGACTTTTTTAAAAAAATTTATTTGTTCCTATGAAGTGAG	T	20	PASS	ClusterIDs=HG2_PB_pbsv_8492:HG2_PB_HySA_15541:HG4_Ill_Spiral_701:HG3_Ill_Spiral_9155:HG2_Ill_Spiral_604:HG2_PB_assemblyticsfalcon_25284:HG2_PB_assemblyticsPBcR_24507:HG2_PB_SVrefine2PB10Xhap12_6191:HG2_PB_SVrefine2Falcon1plusDovetail_11234:HG2_Ill_SVrefine2DISCOVARplusDovetail_12319:HG2_10X_SVrefine210Xhap12_6059:HG4_PB_SVrefine2PBcRDovetail_4204:HG4_PB_pbsv_8493:HG4_Ill_MetaSV_5042:HG2_Ill_MetaSV_4819:HG4_Ill_svaba_10924:HG4_Ill_Krunchall_12314:HG3_Ill_Krunchall_11705:HG2_Ill_Krunchall_11993:HG4_Ill_manta_2097:HG4_Ill_Cortex_3500:HG4_10X_allpass_1674:HG3_PB_pbsv_8273:HG3_Ill_svaba_10906:HG3_Ill_manta_2000:HG3_Ill_Cortex_3519:HG2_Ill_svaba_10817:HG2_Ill_scalpel_8256:HG2_Ill_manta_2445:HG2_Ill_breakscan11_1222:HG2_Ill_Cortex_8502:HG2_Ill_250bpfermikitraw_11669:HG2_Ill_150bpfermikitraw_10985;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_10985:HG2_Ill_250bpfermikitraw_11669:HG2_Ill_Cortex_8502:HG2_Ill_breakscan11_1222:HG2_Ill_manta_2445:HG2_Ill_scalpel_8256:HG2_Ill_svaba_10817:HG3_Ill_Cortex_3519:HG3_Ill_manta_2000:HG3_Ill_svaba_10906:HG3_PB_pbsv_8273:HG4_10X_allpass_1674:HG4_Ill_Cortex_3500:HG4_Ill_manta_2097:HG4_Ill_svaba_10924:HG4_PB_pbsv_8493;NumExactMatchSVs=16;ClusterMaxShiftDist=0.363636;ClusterMaxSizeDiff=0.363636;ClusterMaxEditDist=0.363636;PBcalls=9;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-129;DistBack=1462;DistForward=30;DistMin=30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=7:108884719-108884852;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:43:1/1:2:11:2:19:./.:0:0:0:0:1/1:0:26:./.:.:.:.:.:.
chr7	109436689	HG2_PB_PB10Xdip_26327	TCCTCAAGAAGAGCAACTCGAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAGAAGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCTGATCTCTTGGCAGAAACTCTACAAGCCAGAAGAGACCAGGGGCCATTATTCGACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAATGAAGGATAAATAAAATACTTTACAGAAAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAATAACCAGTAACAGCCACTGCAAAAACATGCCAAATTGTAAAGACGATGAAGGCTAGGAATAAACTGCATCAACTAACGAGCAAAATAACCAGCTAACATCATAATGACAGGATCAAACTTACACATAACAATACTAACCTTAAATGTAAACGGGCTAAATGCTCCAATTAAAAGGCACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACATGCAGAGACACACACAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGACAGGGGTTGCAATCCTGGTCTCTGATAAAACAGACTTTAAACCAACAAATATGAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAACTAACTATCCTAAATATGTATGCACCCAATACAGGAGCACCCAGATTCCTAAAGCAAGTCCTTAGTGACCTACAAAGAGACTTAGACTCCCTCACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTTAACAAGGATATCCAGGAATTGAACTCAGCTCTGCACCTAGCAGACCTCATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTCTCAGCACCACACCACACCTATTCCAAATTTGAACACATTGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCATAGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAAATCCGCTCCACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACAAAATGAAGGCAGAAATAAAGATGTTATTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAGGCAGTGTGTAGAGGGAAATTTATAGCACTACATGCCCACAAGAGAAAGCAGGAAAGACCCAAAATGGACACCCTAACATCACAATCAAAAGAACTAGAGAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATGGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCACGAGCTGGTTTTTTGAAGAGATCAACGAAATTGATAGACCACTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGATTCAAATAGACGCAATAAAAAATAACAAAGCGGATATCACCACTGATCCCACAGAAATACAAACTACCATCAGAGACTACTATAGACACCTCTACACAAATAAACTAGAAAATCTAGAAGAAATGAATAAATTCCTTGACTCATGCCCTCTGCCAAGAATAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGAGGCAACAATTAATAGCTTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCCAAATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACAACAAAAAAAGAGAATTTTAGATCAATATCCTTGATGAACATTGATGGAAAAATCCTCAAAAAAATACTGGCAAACCGAATCCAGCAACACATCAAAAAGCTTACCCACCATGATCGAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACGAAAATCAGTAAACGTAATACAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACACTTCATGCTAAAAAACTCTCAATAAATTAGGTATTGATGGGATGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGTCAAAAACTGGAAACATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGCATTCAATTAGGAAAAAGGAAGTCAAATTGTTCCTGTTTGCAGATGACATGATTGTACATCTAGAAAACCCCCTCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATAGAAAATCAATGTACAAAACTCACAAGCATTCTTATACACCAATGACAGACAATCAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATGGTGAAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAATTTCATACAAAACCAAAAAAGAGCCCATATTGCCAAGGCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAAGTATACTACAAGGATACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGACCAATGGAACAGAACAGAGCCCTCAGAAATATTGTCGCATATCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAGTGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTACATGTTAGACCTAATACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGAAATAGGCATGGGCAAGGACTTCATGTCTAAAACACCCAAAGCAATGGCAACAAAGCCAAAATTGACAAATGGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACCACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAAATTTTACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATGAAAAAGTGGGCGAAGGATATGAACACACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAATACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATAGCATCTCACACCAGTTAGAATGGCGATCTTTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAGCACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCATATTACTGGGTATATACCCAAAGGAATTTAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTACTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGAGTGGATTAAGAAAATGTGGCACATATACACCATGGAACACTATGCAGCCATAAAAAATGATGATTTCATGTCCCTTGTAGGGACACGGATGAAGCTGGAAACCATCATTGTCAGCAAACTATTGCAAAGACAAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACACTGGGGACTGTTGTGGGTTGGGGAGAGGGGGGAGGAATAGCATTAGGAGATATACCTAATGCTAAATGATGAGTTAATGGGGGCAGCACATCAACATGGCACATGTATACATATGTAACAAACCTGCACATTGTGCACATGTACCGTAATACTTAAAGTATAAAAAAATAAAATAAAAAAAGGCACAGGTGCTGCTCTCACAAATCTTTCACAAGGCATTGGTCAAGGATCCATCTTCTGGACCCTCCCAGCTGGGATGAGTAGGTCCAAAGTGACTAGTCCACTCCGCCATCCCAGTCTCTCCAAGTCTTTGGATCCCTTCCTCTACATTAATCCAAGAGAGATCAAGCATTTCCTGCTCACTTACAATGGGCCATCTTTTAATCCATATTTCAGCTAACCAAGCACATAAACTATTAAGAACCTGTTTTAAGTCCCTGAGCTGCAACATTAAATGCAGATTCCCTACTTAGTTGACCCATGTCAATAAATTCAGCCTGATCCAACACTATGTTCCTTCCACTATTATCCCACACCCATAATATCTATTTCCAGCCTGTTCTCTAGGTTTCTGTTTATACAAATTAGAAAACTCAAGCAATTATTTTTGAGTGTAGCGCACCTCCTCATGGGTCACACTCTCAACCTCATCTCTAGGGGCCCACCAGGACTTTAGTCTAGTTATAGGTCTAGAAGTTAAGGAGGGTGTTGGGGGTGGCTCCTGAGGATAATCAACATTTTCTTGCCGGGCAACTGCCTGAGAGGAAGCCATCACTGTTGCCTTAGGCAACACAGTTTATCTCCTCAGACAAAGGTGGAAAGGCTAATGGCAGCAGGGGTTGGGGAGGGGATGTTGGCACTACTTGGAAATGGGAAGCTGTTTCCTCTAGCAAAAAAGATTCATTGGAGTTTACAAACTCAGTGTCCCCAGCTACATCAGCGTTCTCCCACATACCCCCATTCCAAGTTGCAAGATCCCATTCTTTTCCATTCAGTGCCCTCACTTTAACAGTAGACACCTGATGAGGCTGTGCATGCACTTTTGGTTGCAGATCAGCCACTTGCATGATAAGAGCTTGTGTCTGTTTTTCCACAATTTCAGCTCTTTCTCTACAGGAGATAAGACTCTCACTCAAGGCAATCTTAGAAGACTTGAGGCTCAGTATCTGCTTCTGAAGCCGGGAGTTAGAATTCCTGAGTTCATAATTTTCTTTCATCACTTCGTACAGTGAACTTAGGAGAAACCAACAAGCTTCATTATGTTCCTTGGTTCTCCACATATGGCCAAAGGTATTATGTATAGAGTCACTAAGCTCCTGCCTCTCAGGATTGGTGAATCAGTAGTGTCAAATGCATTTATTTTGTCTAACTCTCTAAACAGTTCATGCCAACGACTAATAGTGTTCTCCATACTATTAGAAGTAGAGTCCTTAGCATTTTGGGTATTAAGCACCGAACTCCAGAAACCCCAAAACCAATGAAAGAACTCCATCCTTAATATTCTGTTCCTCTAGAACCACTCCTTGTACCAAAATCTGTATTAGTCAGGGTTCTCTTGAGGGACAGCACTAATAGGTTAAATGTATATATGAAGGGGAGTTTATTAAGGAATATTGATCCACACAATCACAAGGTGAGGTCCCACAATAGGCTGTCTTCAAGCTGAGGAGCAAGGAAGCCAGTCTGAGTCTCAAAGCTGAAGAACTTGGAGTCCGATGTTCAACAGCAAGAAGCATCCAGCACAGAAGAAAGATGTAGGCTGGGAGGCTCAGCCAGTCTCATCATTTCACATTTTCTTCCTGCTTTTTAGATTCTAGCCATGCTGACAGCTGATCAGATGGTGCCCAACCAGATTAAGCGTCGGTCCGCCTTTCCCAGCCCACTGACCCAAATGTTAATCTCCTTTAGCAACACTCTCACAGACACACCCAGGATCAATACTTTTCATCCTTCAATCCAATCAAGTTGGCAGTCAGTATTAACCATCACAACATGACAAATAATTGGAAGGATATTTGCCAATGTAATCATTTTAAAGAGGATGTGATGGTCCAAGCTAGTAGACTTCCAGCAGTTCTCAAACACCAACCTGTAACTATTTTCTTAAGAAACACTGCTCATATCATAATATAAATAAGACTAACGTGGGACCAAAACTTCAATATTTTTTCACCTCTTATCATTATAGTATATGCATAGAAAATATACTCATTTGGAAGAAATGGGGGCATTTTTCTCACACTACTTTCAAGTGTTGTAAGGACATAACTATACCTCTGAGTTGCCCATGAGAAATAGAGCCTAAAGCTCTTTAGCTCAGTTTTACCATGAATACATATAAAAGAAAATGACATGAATCCTAGAGGAAGGCTCTAAGTGTGTTGGGAAATGCTTTTGACTTCTTTGGCACTAACTTTCTGATAAAATATTTTAGTGAGAGGTAAATTGGAAGTTCTGTTTAAATTTGAATCATTAAAGCTTAAGAAAAAATAAGAACAAAAGTAAAAATTGGCTTTAGATATATACAGAATGATTTAAAGTTGACAATTCAGATATATCTTCATTCTTTATAGAGCATCTCTTAGCCAGTTAGAACTGCTATAACAAATTACGTTAGACTGGCTGGCTTACAAATGACAGAAATTTATTTCTCACCATTCTGGAGGCTGGAAATCCAAGATCAGGGTGTCAGCACAGTCGGGTTCTGGTGTGGACTGTCTTCCAGTTGTTAACAACTGTCTTACTGTGTCCTCACACGGTGGATAGCAGAGAGGGGAAACAAACTCTCTAGTGACTCAAAAGAAAATGAATCCCATTCTTGAGGGCTCTGCCCTCATTATCCCACCTAATTCTAATTAGCTCCCAAAGGCCACACATTCTAATACCATTACACTCGGGAGAAGGGTTTCAGCATATGAATTTTGAGAGGATACACATTCAATCTGTAGCAGAGTAGATATTGTAATTGCTAAGGAAACCTGCAGAAAGTTAATAGTGGGCTTCATTTTCACAAGTGGGGCTTATGTTATTACCTGGTATCCTCTGTGAATCTGAGAAAAGAGCACAACTGACAACTGGAAACAGTGGTTGCAAATAATACACAGTTTTAGTTGGTCATAAAAACTTGAGATCCTTTTCACATTTCTGTTTTGTGTAATAAGGATGAAGATTTGTATGTGTATGAATCCACCTAATGGAGATGAAATCCAAACCTTTTGTTATTCTTAGCCTTAGAGCCTATTTGAACTTCTCTTGATATTGGATCGGTAGCTTGCCTAAGAGATGTTTGGGTCAGTTCTTGGTGATTCCTAATCCTGGGTGGCCCACTTTTTATACCTAATTAATATACAACATCAGTCAGTCCATCTTTTTTAGGCTATGACCTCATAACTTGTGGTTAAACTTCCAAGGGTATATATGACTTTCTGTAAAGAAGTAAATAACCATTTCTATCATAAGAAACTGATGAGATTATCATCATTATTTTATTATTTATAGTAGTAGTAGTAATTGCTGTATATTATATATTTATGTAACCAAATCTGAGGAACATCCTATTTTGTTTATTCAGAAATTCTTAACTGACCTCTAAGGAAGACCAGGGTGATTGTCCAACGGGGTCTATTCTCAGAAATTAACTTCTAACATGGACTGACATGTCCCTCCGGGTCACATTGGGAGCTCTGTTGACCTATAACAATAGACTCTGGCAGGAATACATGGGGCCCTAATCTCTGCAAATACTTTGTAGAACCTAAGGCATCATTTTTAAACTGAGAGGTAATACCAACTAGAGATTAAATATGGGGACATTAGAGCCCAACTAGCTGGGTTCAAATCCAGGTTCTCCACTACCTTCTCTGTCTTCCCACTACACTTCTTCTCTGAGATAATGTCTTACCTCTGTCTCTGGGGCTCACTGCGCTTCAGCTCTGCCAACCTTTCAATGATATCTTGAATATGCCACACAATTCTCTGCCCGAAAAATTCCCAATCTAGTTAATTTGAATTTGCTGTTCAATTTTCTGAAATGTTCTTCCCTTAGATATGGTCTTAGGACTCACATTGTATAGGTCTCAATCAAACAGTGTCTCCTCTTAATGGATTTGTCTGAGTACCCTGTGTAAATAGAACCCCATTATTTTCTATCCTTTTGTTTTCATGATTTTTCTGCATTTTATTTTCAAATATCTCTTAAACTGAATAATGTTCTAAACCTGATTGAACCTTCATATTCCCATTCTCAGATTACTTGTTTCTGGCTATTCTTCTCCACAGTTGCTTTTTCTTCCTAACATTCACCAATTCTTGACACTTCATTAAAAATAAAAGAAAAACAATGAGGGAGATGGTTTTTTTTTTTTTTTTTTTTTTTTAACCTGGAGCTTTCTAAGTATTCTGTAGCTGTTGGTTTTTAACAAATATTGGCTGAATGGATCAATAACTCTTAACACTCAATTCCCTTCTCCACCCCTCTACCCTCCAGATTGAGACAGAGAAAAGCAGTGTCGGAAAAGGTAGTTAGAGTTGCTAATTATACAACTCCATGGTCATATTTCTGTTCTTCATTTTACTTGTCCTGATAAATAATTATACTCTTAATAGTCTCCTTCTAGTAAAAACAGTTTCCTCAGTTGACTTTGAAAACACTACCACTGCACCTCTCTACTTTTTTTGAGGATGTATTGCTAGCCTATTTTATCAGGGTTTTTTTTTTTTCTTGTATTTTCCCTTTAAGTGTTAGTATTCCATAGGGTTTCATTTCCAGCAATGACTTTTCTCACTCTGCCTGCTCTTTCTGAGAAATGCCAACTACTCTCATGGTTTTAAATATCCAGTTATGCTAATAGTGCCTAGTTTCTAGTTCCAGACATACCATATAACTTTTCTAGACATCCTTTCTACCTGGATGTTTCATAGACTACTCAAATTCACTTGGCCTTAACTAGGATAGTTATACACTCCACCAATCTGCTTTACTTCAAGGTGCTCTCTAACTTACTTTGTAATTAAAACACATATCTATGATTAGATCACATATCTGTTGAAAGAAAGGAAGAAAAAAAGAAACAAAAAGGAAAGGAAAAAGAAAAGGAAAGGAAAGGAAGGGAAGGGGAGGGAAGGGAAGAGAAGGGAAGGAGGCAAGGCAAGGCAAGGCAAGGAAAGGCAAGGAAAGGAAAGGAAAAACAAGAAAGAAAAAAAGACACAGGAAAAGGAAGAATAAAAAGTTATATGGGGCCTGGCATGGAGGCTTATGCCTGTAATCCTAGCATAGCATTTTGTGAGGCTATGGCAGGAGGATCCCTTGAACCCAGGAGTTTGAGGCCAGTCTGGGCAATATAGGGAGATCCCATCTCCACAAAAAAAGATAAACTAAACTAAACTAAAATATTAGCCAGGCATGGTAGTGCGTGCCTGTGGTCCCAGGTACTAGGGAGGCTGAGGTGGGAGGATTGCCTGACTCTGGGAGGTCAAGGCTGCAGTGAACTGTGATCACATGACTGCACTCACTCCAGCCTGGGTGACACATTCACTCCAGCCTGGGTGACACAGAGAGACTCCATCTCAAGTAATAATAATAATAATATAGGAAGTTTTTTTTAATGAACATCTGTATACTCATTATCTAAACAAAAATATGTAGAATATTAAACTTCTACAGAAGCCCACTGAGATGTAATCAGTTTTCTGAATTCCATGTAAATTATCCCTTTGCTTTTGTTTACAACCACCACCTATGTATGTCTTCCAAAAGGTACATTACTAATTTTATTTCTGTGCAAAATATATAAATGAAGTCATACACTATAGTACACAGGATATACTCTTCAGTGACTTTATTTTTCCTTTCTATATTTTAGGATCAATTTATGTAAATACATATACCTACAGTTAATTCAATTGCACTGTAATAATATATCATGGTAAGAATTGATATGGTTTGGCTGTGTCCCCACCCAAATTTCATCTTGAATTCCCATATGTTGTGAAAGGGACCCAGTGGGAGGTAACTGAATCATAGAGGCAGGTCTTTCCCATTCTGTTCTCGTGATAGTGAGTAAGTCTCAGGAGATCTGACGGTTATTAAAAGGGGAGTTTTCCTGCACAAGCTCCCTTTGCTTACTGCCATCCATGTAAGACATGACTTGCTCCTCCTTGCCTTCTGCCATGATTATGAGGCTTCCTCAGCCATGTGGAACTGTAAGTCCAATTAAACCTCTTTCTTTTGTAAATTGCCCAGTCTTGGGCACATCTTTATCAGCAGGGTGAAAACAGACTAATACAGTAGAGTTGGTACCAGTAGAGTTTGGTATTTCTGGAAAGATACTCAAAAATGTGGAAGTGACTTTGGAACTGGGTAACAGGCAGAGGCTGGGACAGTTTGGAGGGCTCAGGAGAAGACAGGAAAATGTGTGAAAGTTTGGAACTTCCTAGAGACTTGTTGAATGTCTTTGACCAAAAGCCTGATACTGATATGGACAATAAGGTCCAGGCTGAGGTGGTCTCAGATGGAGATGAGAACTTGTTGGGAACTGGAACAAAGGTGACTCTTGTTATGTTTTAGCAAAGATACTGGTGGCATTTTGCCCCTGCCCTAGAGATTTGAGGAACTTTGAACTTGAGAGAGATGATTTAGGGTATCTGGCAGAAGAAATTTCTAAGCAGCAAAGCATTCAAGAGGTGACTTGGGTGCTATTAAAGGTATTCAGTTTTATAAGGTAAGCAGAGCATAAAAGTTTGGAAAATTTGCAGCCTGACAATGTGATAGAAAAGAAAAAATTCATTTTCTGAGGAGAAATTCAAGCCAGCGGCAGAAATAAGTAATGAGGAGCCAAATTTTAATCCACAGGACAATGGGGAAAATGTCTCCAGGGCATGTTATTGGTCTTCATGGCAGCCTCTCCCATCACAGGCCCAGAGGCCTAGAAGAAAATGGTTTCCTGGGCTGGGCCCAGGGTGCTCATGCTGTGTGCAGTCTAGGGACTTGGTGCCCTGTATCCCAGCTGCTCCAGCTGTGACTAACAGGGTAAAGGTACAGCTTCAGCTGTTGCTTCAGAGGGTGGAAGCCCCAAGCCTGGACAGCTTCCATGTGGTGTTGACCCTGTGGGTGCACAGAAGGCAAAAATTGAGGTTTGGGAACCTCTGCCTAGATTTCAGAGGCTGTATGGAAATGCCTGGATGCCCAAGCAAAAATTTGCTGCAGGGGTAGAGCCCTCATGGATAATCTCTGCTAGGGCAATGCAGAAGGAAAATATATGGTCTGAGTCTCCACACAGAGTCCCCACTGGGGCACCACCTAGTGCATCTGTGAGAAGAGGGCCATCATCCTCCAGATCCCAGAATGGTAGATCCACTCACAGCTTGCACTGTGCACCTGGAAAAGCCGCAGTCACTCAATGCCAGCCTGGAAAAGCAGCCAGGAAAGGGACTATACCTTGCAAAGCCACAGGGGCAGAGCTGCCCAAGACCATGGGAACCCACCTCTTGCATGAGTGTGACATGGATGTGAGACATGGAATCAAAGGAGATCATTTTGTAGCTTTAAGATTTGACTGCCCCACTGGATTTCAGACTTGCATGAGGCCTGTAGCCCCTTTGTTTTGGCCAATTTCTCCCATTTGGAATGGCTGTATTTATCCAATGCCTATACCCCCATTGTATCTAGGATGTAACTAACTTGCTTTTGATTTTACAGACTCATAGGCAGAAGGCATTTGCCTTGTCTCAGATGAGACTCTGTACTGTGGACTTTTAAGTTAATGCCAAAATGAGTTGAGACTTTGGGGGACTGTTGGGAAGGCATGATTGGTTTTGAAATGTGAGAACATGAGATTAGAGAGGGGACAGGGGAGGAATGATATGGTTTGGCTGTGTCCCCACCAAATTTCATCTTGAATTCCCACGTTGTAGGAGGGACCTGGTGGGAGGTAATTGAATCTTGGGCACAGATCTTTCCCATGCTGTTCTCGTGGTAGTGAGTAAGTCTCACAAGATCTGATTATTATTATTAGGGGGAGTTTTCTTGCACAAGCTCTCTTTGCTTGCTGCCATCCATGTACGACATGACTTGCTCCTCCTTGCCTTCTGCCATGACTATGAGGCTTCCCCAGCCACATGGAACTGTAAGTTCAATTAAACCTCTTTCTTTTGTGAATTGCCCAGTCTTGGGTATGTCTTTATCAGCAACGTGAAAACAGATTAGTACAGAATAAGCCATAATTTATTTATCAATTATATTGTAAATAGATTATTGAGTTGTTCCTCATTTTTCTGTTTGTGTGTTTGTTTTACTATTATGCAAATTTTGTTGCTTTACAAAAATTCTCATCTATGTCACATTATGCACATGTGCAAGAGTTTAACATACATACCTCGTAGTGAAATTTCTGGCTCATAGAAGAAGTACATGTTCCACTTTGCTAGGAATTGTCAAAATAATTTCTAAAATGTTTTTTTCAATAAAGAATTGCACCAGCAGAGAGAGAATGTTGTTGTTGTGTCAGCTTTCTGCCAAAAGTTGGTAATATCTGACTTTTCAGTTATCATCTTTTCCTTAAGGAAGACCTGCGTCTGTTTTGTATCTTAAGAAAACGTTTTTATTAATCCGATGACATACGTAATGAACTGAATGTTAAGTCCTTCCTAGTTTTATATGTTGAAGCTCTAACCACCAATGATGGTATTTAGAGGTGCGGCTTTTTGGAAGCAGGTAATTAGGCTTAGATGAGATTATGAGGATAGGGTCCTCATGATGGGGTTCATGCCTTTCTAGAAAGAAACTAGAGAGATTTCTCTCTCTCTCCACCATGTGAGGACACAGCAAGAAGATGACTAGCTCCAAGCCAGAAAGAATGCCCTCACCAGAAACCAAACTAGCCTATACCTTGATCTTGGATTTCCAGCCTCCAAAACTATGAGAAATGCATTTCTCTTATTTAAGGCTTTAAGCCTATGCTATTTTGTTGTGGAGCCCAAGCTGACTAATACACATACATATATTTTACTATATTGACATTGACCGAGTTTTGAACTTTTCATTTAATATTACTAGGATTAATTTTTGTTTATATGGAGTGGGTGTGCAATATCACATTTTTCACATCCATAACCCAAGTCCCAGCTTTTTAATTGAAATTCTGTAATTTCTGTACTAAGCTGCCATGCTATATCTATCACATTTTAAAAGTTCATGTATGAAGTTCAGCTCTTCTCAACTTAGATTCTATTTGATTCCTTGTCCTTGTTCTTTGTTCCTATTTTGTCTTTGTCTTTACTGTTTTTCTGTTTTGTTTCTTTTTGTGGTTTTAATTGAGCATTTTATGATTCCATTTTCTCTCCTTTTTTAGCATAACTAATTATACTTCCTTTTTTACTTTTTTTAGTGTTGCCCTGTAGTTTGCAATTTACATTTACAACAAATCTATACTCACTTTGAAATAATACTATAAAGCTTCATGTGTTGGTCAAGTGCCTTATAATAAAAAAAATAAGATCCTAATTTCTTCCTCCCTTTTCTTGTATTATTGTTGTCATTTCTTTCATTTATGCATAAGCACACATAAGCATACATATGTAATATGTATATATATAAATATATAAAATAATCAAATATATTGTGGTCATTATTTTAAACAGACTTTTATCAGTTGGGTTGAATAAGAAATATAAAAGTGTATATTTTACCTTGACACTTCCTTACTTGAATGCTCTTTCTTTATGTAAGTCCAGTTTTCTGACCTATTCTATTTTTCTTCTCTCTGAAGAACCTTTTAACATTTCTCGCAAGGCAGGTCTACTGGCAACAAATTTTCTCAATTTTTGTTTGTCTAAGAAAGTCCGTATTTCTCTCTCACTTTTGAAGGATAATTTTACAGGGTGTAAAATTCTAGGCTGGTGTGGGTTTCTTTTTTTTATTTTCTCAACATTTCAAATATTTTCCTCCACTCTTTTCTCACTTGTGTGTTTTCTGAGAAGTCAGATGTTATTCTAATCTATTCTTCTGTAGGTAAAGTTTGTTTTTTTTAAATTATTTCCTCTGGCTTCTTTCAAGTATTTTTTCTTCATTGATTTTCTGCATTTTGCATATAATATGCCTAGGTTTTTTGGCATTTATCTTTGTTGTTTTTTTCTGAGCTTCCTGGAACAATAGTTTGGTCTTTAACATTAATTTGGGGGAAACGCTCAGTCATTATTGTTTAAAACATTTCTTCTGTTTATTTCTCTCTCTCTTCTCCTCCTAATATTCACATTACACACACTTTATGGCTTTTGTAGTTGTCTCATAGTTATTGGACATATTTTTTCAATCTTTTTTTCTTTGCCTTTCAACTTTGGAAGTTTCTATCATGAGATCATTAGCATGAGGAAAACTCAGCAATTCTTTCCTCAGTCATGTCCAGTCTATTAATGAGCTCATCAGAGACATTCTTTATTTTATAGTGTTGTTGTTGTTCTTCAGCATTTCTTTTAGATTCTTTCCTCTTTCCACTCTTTTCATCTTTCTGCTTACATTGCCCATCTATTCTTGTATGCTATCTATTTTATCCATTAAAGCCTTCAGCATATTAATCATAGTTGTTTTAAATTCCAAATCTAATAATTTCAAAATCCCTGCCATATCTGAGAATGGTTAAAATGTTGTTCTGTCTCTTCAAACTTTGTTTTGCTTGGTTTGGGGGGAGTTTTCTTTCCTTTTATTATGTCTTATATATTTCTTTCTTTCTTTCTTCCTTTCTTTCTTTGGATAGCTGGATATGATTTATTAGGTAAAAGGAACTATGGTCAAGAGGCCTTCAGTGGCATGGTGGTAAGATGTGGGGAGAAAATCCTTGCTTAGGTCTGTCTGTTAGTGAGCCTGGGACTCTACACTGTGATCTTCACAACCGCTTCTGTTTCTGGCCTTAGGTGAAACAGGATGGCTAGAATGGGCTGAAGTTGGGTATCTCCCAGCCCCCAGATCAGTTAGGTTCTGACAAGACTCCAGCAGGTCTCCCAAAATATTTTCTCCTGAGGTAAGTCTTTGTAGAAAGTACAGAATGCTCTGGTATATTTCAGTATGGTTCCTTTTCCTCTCCTCTACTGGAAGCAGAAGGGATTTTTTTTCTCCAGACTTCGCTGGAAAATCCTGGTTGAGCTCTGAATGTAGAATACGAAAACTTTGGGACCTCCCTCCGTCAGGATTCCTCTGGAGTTTTAAATTATCAGACTTGTCCACACTAAGCTTTGAGAAATTCTTCAATTACAGTTTAGATTTTCTTACCCAAGCACTGGTTCCCATAGAGGTTTCTGTCTGTGGATTTCTGCTTTGGTAGATTGAGATTCTGTACATTTGCCTGTCTCTCCAAATTTGAAGATCAATGATTTTTCCCCTTGACTTCATTTATCTGAGAAATCTAAGAAGGATTGTTGATTTTCATTTGTTCAGGTTTTTCACTTGTTAGGATGGAGTGGCAACTTTCAACTCCTTACATGCCAAATCAGAAACCAGAAGTCCCCCAATGAATTTGTAAGTATTAACATTTTCTGCTGTAATAAACATTTTTTCTAATCTTTGTTAATGGTTAATATTTTAAATAAAGTTTTTGTTTCCATACAATAAAATTCACTGTTTTGCAACAGCTCTGTAACCGCCACCACAGCCAAGATATAGAAATATCTCCCCTCCAAAAATATTCAGTTGTATCCCTTTTTAGTGATCCTTATCATTGTATCAAGCTGTTGTGTACATCTGTAGTTTGTACCTCTTATTTGCTGTGTAGTATTCTGTTATATGGATGTACCAGTTTATTTACCTGTTCATCAAGTGAAGGATATTTGGGTTGTGTGCGGTTGTTAGCAATTATAAATGCTAACACTTATAAATGCTATAAACATTATTAATGAAGTAGAACTTGAAAAGCATTACCATTTGATAATAATAAACCACAAAATATTTAGGCATAAATCTAGCAAAATAGGAACAGGATCTATAAACTCAAACTGTAAATCTCATGAAAGAAAAGAGAACACCTACCAAATTGGGAAATAAAGTATTTTATATTATAAATATAACCCTGTAAGTATTCCATTATAAATATTCTAATATGTGATAATATATTATTGATTATAAATATTCTAATATTCAATGGTATAGTAAGAAAATAATTAACAATAACATATAGTATTTTTCAAAGAAGCTAGGTATTTGTAGTGTTCCCAACACAAAGAAAAATATTTTAGGTGATGAACATCCCAATTACCCTGATTTGATCAATACACGTTGTATACATATATCAAAGTATCACACATACCCACAAAATATGAACAACTATGATATATCAACAAAAATAAAAATAAATAAATATTTGTAGACAGGCTTTTGCATGAACATAACTTTTCATTTCTGTTGGGTAAATACCACTGGGATTGCTAAATCATATGTTAAGAATGTGTATAATTTTATAAGAAACTGCCAGTTTTCCACAGGAACGTGATAGCTTACCTTCTTACTAGCAGAGTATGAGCATTCTGGTTGCTGCTTATACTTTCCTGCACTTGGAATTATCCATTTTGTTGTGGTTTGTGTGTGTCTGTGTTTGGACATTCTAGTAAGTTAGTGGTGGCATGTAATTGTGTTTTTAATGTTCATTTTTCTAATGACTAATGATGCTGAGAATCATATGTAATTATTTGTCATTCATACACTGTTTTCTTGTGAAGTGTCTACACAAATATTTTGTCCATATTTTAAAACTGCCTTATTTGTTCTTTCCAAGCTAGGTTACTTGTAAATAGCTTATTCCAATCTATACTCTGTCTTTCAATCCTCTTAGCAATCTTTTTCAAAAGGCAGAGATCTTTATTTTGATGAAGACCAATTTATCACCTTTTTTTCTTTTATGGATCAT	TTGTCAT	20	PASS	ClusterIDs=HG2_Ill_Krunchall_12001:HG3_PB_pbsv_8275:HG4_PB_pbsv_8496:HG2_PB_pbsv_8495:HG4_PB_SVrefine2PBcRDovetail_4207:HG4_PB_SVrefine2Falcon1Dovetail_5162:HG4_Ill_SVrefine2DISCOVARDovetail_6196:HG3_PB_SVrefine2PBcRDovetail_3841:HG2_PB_SVrefine2PB10Xhap12_6196:HG2_PB_SVrefine2Falcon1plusDovetail_11237:HG2_Ill_SVrefine2DISCOVARplusDovetail_12320:HG4_10X_allpass_1675:HG2_PB_PB10Xdip_26327:HG4_Ill_MetaSV_5045:HG3_Ill_MetaSV_5002:HG3_10X_allpass_1728:HG2_10X_allpass_1439:HG2_Ill_MetaSV_4820:HG4_Ill_Krunchall_12321:HG3_Ill_Krunchall_11712;NumClusterSVs=20;ExactMatchIDs=HG2_PB_PB10Xdip_26327:HG2_Ill_SVrefine2DISCOVARplusDovetail_12320:HG2_PB_SVrefine2Falcon1plusDovetail_11237:HG2_PB_SVrefine2PB10Xhap12_6196:HG3_PB_SVrefine2PBcRDovetail_3841:HG4_Ill_SVrefine2DISCOVARDovetail_6196:HG4_PB_SVrefine2Falcon1Dovetail_5162:HG4_PB_SVrefine2PBcRDovetail_4207;NumExactMatchSVs=8;ClusterMaxShiftDist=0.000290503;ClusterMaxSizeDiff=0.000290503;ClusterMaxEditDist=0.000290503;PBcalls=9;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-17210;DistBack=6392;DistForward=-17213;DistMin=-17213;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=7:109436690-109453901;PctSeqSimilarity=0.9998;PctSizeSimilarity=0.9999;PctRecOverlap=0.9995;SizeDiff=2;StartDistance=0;EndDistance=8;GTMatch=0;TruScore=99;MatchId=3771.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:122:./.:0:3:0:3:./.:0:0:0:0:1/1:0:31:1/1:0:415:17351:.:.
chr7	109693706	HG2_Ill_Krunchall_12004	TATATATAATATATATATATATTTTATATATATATATATATTTTATATATATATATATATA	T	20	PASS	ClusterIDs=HG3_PB_HySA_12947:HG3_PB_pbsv_8276:HG3_Ill_scalpel_8379:HG2_PB_HySA_15548:HG3_Ill_Krunchall_11715:HG3_Ill_GATKHC_13928:HG3_Ill_GATKHCSBGrefine_5775:HG2_Ill_Krunchall_12004:HG2_PB_assemblyticsPBcR_24513:HG2_PB_pbsv_8496:HG2_Ill_SpiralSDKrefine_16175:HG3_Ill_250bpfermikitraw_11363:HG3_Ill_150bpfermikitraw_11047:HG3_10X_allpass_1729:HG2_Ill_250bpfermikitraw_11679:HG2_10X_allpass_1440;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_Krunchall_12004:HG3_Ill_GATKHCSBGrefine_5775:HG3_Ill_GATKHC_13928:HG3_Ill_Krunchall_11715:HG3_Ill_scalpel_8379;NumExactMatchSVs=5;ClusterMaxShiftDist=0.28125;ClusterMaxSizeDiff=0.28125;ClusterMaxEditDist=0.28125;PBcalls=5;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-60;DistBack=49316;DistForward=44858;DistMin=44858;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:109693705-109693767;PctSeqSimilarity=0.9915;PctSizeSimilarity=0.9836;PctRecOverlap=0.8548;SizeDiff=-1;StartDistance=9;EndDistance=8;GTMatch=0;TruScore=94;MatchId=3772.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:0|1:24:1:4:49:./.:0:0:0:0:0/1:20:4:./.:.:.:.:.:.
chr7	112191956	HG3_Ill_svaba_10932	CGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_8501:HG3_PB_assemblyticsfalcon_25147:HG2_PB_assemblyticsPBcR_24528:HG4_PB_assemblyticsfalcon_24716:HG4_PB_SVrefine2Falcon1Dovetail_5168:HG2_PB_assemblyticsfalcon_25304:HG2_PB_SVrefine2Falcon1plusDovetail_11240:HG3_PB_SVrefine2Falcon1Dovetail_5169:HG3_Ill_svaba_10932:HG3_Ill_GATKHCSBGrefine_5780:HG3_Ill_250bpfermikitraw_11379:HG2_PB_SVrefine2PBcRplusDovetail_10447:HG2_PB_SVrefine2PB10Xhap12_6199:HG2_Ill_GATKHCSBGrefine_5863:HG3_PB_pbsv_8284;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5863:HG2_PB_SVrefine2PB10Xhap12_6199:HG2_PB_SVrefine2PBcRplusDovetail_10447:HG3_Ill_250bpfermikitraw_11379:HG3_Ill_GATKHCSBGrefine_5780:HG3_Ill_svaba_10932:HG3_PB_SVrefine2Falcon1Dovetail_5169;NumExactMatchSVs=7;ClusterMaxShiftDist=0.020202;ClusterMaxSizeDiff=0.020202;ClusterMaxEditDist=0.040404;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-98;DistBack=78832;DistForward=5025;DistMin=5025;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=89;REFWIDENED=7:112191900-112192086;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3773.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:0|1:21:0:2:32:./.:0:0:0:0:0/1:22:14:./.:.:.:.:.:.
chr7	113416161	HG2_Ill_MetaSV_4825	ACATAATGGCATTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTACATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAGTTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATCTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATACATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTCTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCAGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGTCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAAGTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGTTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCTCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTTGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTCCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCC	A	20	PASS	ClusterIDs=HG4_Ill_MetaSV_5050:HG2_10X_allpass_1441:HG4_PB_assemblyticsfalcon_24727:HG3_PB_assemblyticsfalcon_25157:HG2_PB_assemblyticsPBcR_24540:HG3_10X_allpass_1731:HG4_10X_allpass_1677:HG2_PB_assemblyticsfalcon_25315:HG4_Ill_Krunchall_12343:HG3_Ill_Krunchall_11738:HG2_Ill_tnscope_991:HG4_PB_pbsv_8512:HG4_PB_SVrefine2PBcRDovetail_4215:HG4_PB_SVrefine2Falcon1Dovetail_5176:HG4_Ill_SVrefine2DISCOVARDovetail_6210:HG4_Ill_GATKHCSBGrefine_5952:HG3_PB_pbsv_8293:HG3_PB_SVrefine2Falcon1Dovetail_5176:HG3_Ill_SVrefine2DISCOVARDovetail_6368:HG3_Ill_MetaSV_5007:HG3_Ill_GATKHCSBGrefine_5784:HG2_PB_pbsv_8511:HG2_PB_SVrefine2PBcRplusDovetail_10453:HG2_PB_SVrefine2PB10Xhap12_6206:HG2_PB_SVrefine2Falcon1plusDovetail_11246:HG2_Ill_SpiralSDKrefine_16193:HG2_Ill_SVrefine2DISCOVARplusDovetail_12329:HG2_Ill_MetaSV_4825:HG2_Ill_GATKHCSBGrefine_5868:HG2_10X_SVrefine210Xhap12_6071:HG2_Ill_breakscan11_1223;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6071:HG2_Ill_GATKHCSBGrefine_5868:HG2_Ill_MetaSV_4825:HG2_Ill_SVrefine2DISCOVARplusDovetail_12329:HG2_Ill_SpiralSDKrefine_16193:HG2_PB_SVrefine2Falcon1plusDovetail_11246:HG2_PB_SVrefine2PB10Xhap12_6206:HG2_PB_SVrefine2PBcRplusDovetail_10453:HG2_PB_pbsv_8511:HG3_Ill_GATKHCSBGrefine_5784:HG3_Ill_MetaSV_5007:HG3_Ill_SVrefine2DISCOVARDovetail_6368:HG3_PB_SVrefine2Falcon1Dovetail_5176:HG3_PB_pbsv_8293:HG4_Ill_GATKHCSBGrefine_5952:HG4_Ill_SVrefine2DISCOVARDovetail_6210:HG4_PB_SVrefine2Falcon1Dovetail_5176:HG4_PB_SVrefine2PBcRDovetail_4215:HG4_PB_pbsv_8512;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0051316;ClusterMaxSizeDiff=0.0051316;ClusterMaxEditDist=0.0051316;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-6046;DistBack=887;DistForward=-6032;DistMin=-6032;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:113416162-113422222;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:155:1/1:1:21:0:12:./.:0:0:0:0:1/1:0:30:1/1:1:407:6165:.:.
chr7	113953501	HG2_Ill_scalpel_8276	TAAAACAAAAATATTGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_8297:HG4_PB_assemblyticsfalcon_24735:HG3_PB_assemblyticsfalcon_25165:HG2_PB_assemblyticsPBcR_24547:HG2_PB_assemblyticsfalcon_25323:HG4_Ill_Krunchall_12352:HG3_Ill_Krunchall_11748:HG2_Ill_Krunchall_12035:HG4_PB_pbsv_8516:HG2_PB_HySA_15576:HG4_Ill_MetaSV_5052:HG3_Ill_MetaSV_5008:HG2_Ill_tnscope_992:HG2_Ill_MetaSV_4826:HG4_PB_SVrefine2PBcRDovetail_4216:HG4_PB_SVrefine2Falcon1Dovetail_5178:HG4_Ill_svaba_10968:HG4_Ill_scalpel_8077:HG4_Ill_manta_2101:HG4_Ill_SVrefine2DISCOVARDovetail_6212:HG4_Ill_GATKHCSBGrefine_5953:HG4_10X_allpass_1678:HG3_PB_SVrefine2PBcRDovetail_3844:HG3_PB_SVrefine2Falcon1Dovetail_5178:HG3_Ill_svaba_10951:HG3_Ill_scalpel_8401:HG3_Ill_manta_2008:HG3_Ill_SVrefine2DISCOVARDovetail_6371:HG3_Ill_GATKHCSBGrefine_5785:HG3_10X_allpass_1732:HG2_PB_pbsv_8515:HG2_PB_SVrefine2PBcRplusDovetail_10455:HG2_PB_SVrefine2PB10Xhap12_6208:HG2_PB_SVrefine2Falcon2Bionano_4138:HG2_PB_SVrefine2Falcon1plusDovetail_11248:HG2_Ill_svaba_10858:HG2_Ill_scalpel_8276:HG2_Ill_manta_2448:HG2_Ill_SVrefine2DISCOVARplusDovetail_12332:HG2_Ill_GATKHCSBGrefine_5869:HG2_10X_allpass_1443:HG2_10X_SVrefine210Xhap12_6072;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6072:HG2_10X_allpass_1443:HG2_Ill_GATKHCSBGrefine_5869:HG2_Ill_SVrefine2DISCOVARplusDovetail_12332:HG2_Ill_manta_2448:HG2_Ill_scalpel_8276:HG2_Ill_svaba_10858:HG2_PB_SVrefine2Falcon1plusDovetail_11248:HG2_PB_SVrefine2Falcon2Bionano_4138:HG2_PB_SVrefine2PB10Xhap12_6208:HG2_PB_SVrefine2PBcRplusDovetail_10455:HG2_PB_pbsv_8515:HG3_10X_allpass_1732:HG3_Ill_GATKHCSBGrefine_5785:HG3_Ill_SVrefine2DISCOVARDovetail_6371:HG3_Ill_manta_2008:HG3_Ill_scalpel_8401:HG3_Ill_svaba_10951:HG3_PB_SVrefine2Falcon1Dovetail_5178:HG3_PB_SVrefine2PBcRDovetail_3844:HG4_10X_allpass_1678:HG4_Ill_GATKHCSBGrefine_5953:HG4_Ill_SVrefine2DISCOVARDovetail_6212:HG4_Ill_manta_2101:HG4_Ill_scalpel_8077:HG4_Ill_svaba_10968:HG4_PB_SVrefine2Falcon1Dovetail_5178:HG4_PB_SVrefine2PBcRDovetail_4216;NumExactMatchSVs=28;ClusterMaxShiftDist=0.111293;ClusterMaxSizeDiff=0.111293;ClusterMaxEditDist=0.111293;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=21517;DistForward=-296;DistMin=-296;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=7:113953502-113953830;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3775.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:./.:0:0:0:0:./.:0:0:0:0:1/1:0:62:0/1:2:7:.:.:.
chr7	116842003	HG2_Ill_SpiralSDKrefine_16209	GCTCGAAGCTATCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGACGCCCAGGCTGGAGTGCAGTGGCGGGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTAAGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1225:HG3_PB_assemblyticsfalcon_25184:HG2_Ill_Krunchall_12054:HG4_PB_assemblyticsfalcon_24759:HG2_PB_assemblyticsPBcR_24568:HG4_Ill_Spiral_702:HG2_PB_HySA_15604:HG4_PB_HySA_12580:HG4_PB_pbsv_8526:HG4_PB_SVrefine2PBcRDovetail_4222:HG4_PB_SVrefine2Falcon1Dovetail_5183:HG4_Ill_scalpel_8088:HG4_Ill_manta_2103:HG4_Ill_SVrefine2DISCOVARDovetail_6223:HG4_Ill_GATKHCSBGrefine_5963:HG4_10X_allpass_1679:HG3_PB_SVrefine2Falcon1Dovetail_5184:HG2_PB_pbsv_8527:HG2_PB_SVrefine2PBcRplusDovetail_10462:HG2_PB_SVrefine2PB10Xhap12_6216:HG2_PB_SVrefine2Falcon2Bionano_4145:HG2_PB_SVrefine2Falcon1plusDovetail_11254:HG2_Ill_scalpel_8292:HG2_Ill_SpiralSDKrefine_16209:HG2_Ill_MetaSV_4829:HG2_Ill_GATKHCSBGrefine_5879:HG2_10X_allpass_1444:HG2_10X_SVrefine210Xhap12_6081;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6081:HG2_10X_allpass_1444:HG2_Ill_GATKHCSBGrefine_5879:HG2_Ill_MetaSV_4829:HG2_Ill_SpiralSDKrefine_16209:HG2_Ill_scalpel_8292:HG2_PB_SVrefine2Falcon1plusDovetail_11254:HG2_PB_SVrefine2Falcon2Bionano_4145:HG2_PB_SVrefine2PB10Xhap12_6216:HG2_PB_SVrefine2PBcRplusDovetail_10462:HG2_PB_pbsv_8527:HG3_PB_SVrefine2Falcon1Dovetail_5184:HG4_10X_allpass_1679:HG4_Ill_GATKHCSBGrefine_5963:HG4_Ill_SVrefine2DISCOVARDovetail_6223:HG4_Ill_manta_2103:HG4_Ill_scalpel_8088:HG4_PB_SVrefine2Falcon1Dovetail_5183:HG4_PB_SVrefine2PBcRDovetail_4222:HG4_PB_pbsv_8526;NumExactMatchSVs=20;ClusterMaxShiftDist=0.1458;ClusterMaxSizeDiff=0.1458;ClusterMaxEditDist=0.1458;PBcalls=14;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=49726;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:116842004-116842328;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:34:0|1:37:0:0:31:./.:0:0:0:0:0/1:32:18:0/1:32:9:.:.:.
chr7	117893950	HG3_Ill_manta_2012	TCATCCTTGTGTATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6084:HG4_Ill_GATKHCSBGrefine_5965:HG4_Ill_manta_2104:HG3_Ill_Krunchall_11775:HG2_Ill_Krunchall_12061:HG2_PB_assemblyticsfalcon_25343:HG2_PB_HySA_15610:HG2_PB_assemblyticsPBcR_24573:HG4_Ill_Spiral_704:HG3_PB_HySA_13004:HG3_PB_pbsv_8309:HG3_Ill_Krunchall_11774:HG4_PB_pbsv_8527:HG2_PB_pbsv_8529:HG2_Ill_breakscan11_1226:HG3_Ill_MetaSV_5010:HG2_Ill_tnscope_993:HG2_Ill_MetaSV_4830:HG4_Ill_scalpel_8096:HG4_10X_allpass_1680:HG3_PB_assemblyticsfalcon_25191:HG3_PB_SVrefine2PBcRDovetail_3852:HG3_PB_SVrefine2Falcon1Dovetail_5186:HG3_Ill_scalpel_8422:HG3_Ill_manta_2012:HG3_Ill_GATKHCSBGrefine_5794:HG3_10X_allpass_1733:HG2_PB_SVrefine2PBcRplusDovetail_10464:HG2_PB_SVrefine2PB10Xhap12_6218:HG2_PB_SVrefine2Falcon2Bionano_4147:HG2_PB_SVrefine2Falcon1plusDovetail_11256:HG2_Ill_scalpel_8298:HG2_Ill_manta_2451:HG2_Ill_GATKHCSBGrefine_5880:HG2_10X_allpass_1445;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6084:HG4_Ill_scalpel_8096:HG4_10X_allpass_1680:HG3_PB_assemblyticsfalcon_25191:HG3_PB_SVrefine2PBcRDovetail_3852:HG3_PB_SVrefine2Falcon1Dovetail_5186:HG3_Ill_scalpel_8422:HG3_Ill_manta_2012:HG3_Ill_GATKHCSBGrefine_5794:HG3_10X_allpass_1733:HG2_PB_SVrefine2PBcRplusDovetail_10464:HG2_PB_SVrefine2PB10Xhap12_6218:HG2_PB_SVrefine2Falcon2Bionano_4147:HG2_PB_SVrefine2Falcon1plusDovetail_11256:HG2_Ill_scalpel_8298:HG2_Ill_manta_2451:HG2_Ill_GATKHCSBGrefine_5880:HG2_10X_allpass_1445;NumExactMatchSVs=18;ClusterMaxShiftDist=0.223035;ClusterMaxSizeDiff=0.223035;ClusterMaxEditDist=0.223035;PBcalls=14;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-302;DistBack=46895;DistForward=-303;DistMin=-303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=7:117893951-117894269;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3777.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:25:0|1:36:0:2:30:./.:0:0:0:0:0/1:33:23:0/1:24:5:.:.:.
chr7	118343800	HG2_10X_allpass_1446	TCCAGACTGCACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTGTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCCAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGTTCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_605:HG3_Ill_Krunchall_11781:HG4_Ill_Krunchall_12385:HG3_PB_pbsv_8313:HG2_Ill_Krunchall_12068:HG2_PB_HySA_15617:HG2_PB_pbsv_8533:HG4_PB_pbsv_8533:HG3_Ill_MetaSV_5011:HG2_Ill_tnscope_994:HG2_Ill_MetaSV_4831:HG4_PB_SVrefine2PBcRDovetail_4226:HG4_PB_SVrefine2Falcon1Dovetail_5186:HG4_Ill_SVrefine2DISCOVARDovetail_6228:HG4_Ill_MetaSV_5056:HG4_Ill_GATKHCSBGrefine_5968:HG4_10X_allpass_1681:HG3_PB_SVrefine2PBcRDovetail_3855:HG3_PB_SVrefine2Falcon1Dovetail_5190:HG3_Ill_SVrefine2DISCOVARDovetail_6393:HG3_Ill_GATKHCSBGrefine_5796:HG3_10X_allpass_1734:HG2_PB_SVrefine2PBcRplusDovetail_10466:HG2_PB_SVrefine2PB10Xhap12_6220:HG2_PB_SVrefine2Falcon2Bionano_4149:HG2_PB_SVrefine2Falcon1plusDovetail_11259:HG2_Ill_breakscan11_1227:HG2_Ill_SpiralSDKrefine_16221:HG2_Ill_SVrefine2DISCOVARplusDovetail_12351:HG2_Ill_GATKHCSBGrefine_5884:HG2_10X_allpass_1446:HG2_10X_SVrefine210Xhap12_6086:HG3_Ill_Spiral_9209;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6086:HG2_10X_allpass_1446:HG2_Ill_GATKHCSBGrefine_5884:HG2_Ill_SVrefine2DISCOVARplusDovetail_12351:HG2_Ill_SpiralSDKrefine_16221:HG2_Ill_breakscan11_1227:HG2_PB_SVrefine2Falcon1plusDovetail_11259:HG2_PB_SVrefine2Falcon2Bionano_4149:HG2_PB_SVrefine2PB10Xhap12_6220:HG2_PB_SVrefine2PBcRplusDovetail_10466:HG3_10X_allpass_1734:HG3_Ill_GATKHCSBGrefine_5796:HG3_Ill_SVrefine2DISCOVARDovetail_6393:HG3_PB_SVrefine2Falcon1Dovetail_5190:HG3_PB_SVrefine2PBcRDovetail_3855:HG4_10X_allpass_1681:HG4_Ill_GATKHCSBGrefine_5968:HG4_Ill_MetaSV_5056:HG4_Ill_SVrefine2DISCOVARDovetail_6228:HG4_PB_SVrefine2Falcon1Dovetail_5186:HG4_PB_SVrefine2PBcRDovetail_4226;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00561798;ClusterMaxSizeDiff=0.00561798;ClusterMaxEditDist=0.0056338;PBcalls=12;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-355;DistBack=3967;DistForward=-341;DistMin=-341;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:118343801-118344170;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3778.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:20:1:20:./.:0:0:0:0:1/1:0:48:./.:1:10:.:.:.
chr7	118831249	HG4_Ill_SVrefine2DISCOVARDovetail_6229	GAGGCATTTTTTCTCATGTTTTATTTTTCCTGTGAAAGTTGTATAAAATAGAGTTTTCCTTGATAATTTGGTAGAATATTTCTGTAATACAATCTTGTATGGGTATAAAGCATGTGTGGATGGGTGTTGGGTGTGGCAGTGGTGGGCAATGAGAAGTCTCTAAGTAGCATTTCAGTTACTGTCATGCTTCTTTATATGTCTACTATGCTAACTTTGGCATTTTAAATTTTTCCAGAAGAGCGTATTCATTTTGTCTAGGTTTGCAAATTACACTGACATATAATTGTGTGCATGTCCACATAAATGTGTGTATATGTGCACACACACATATATATACACATATATTTATATGCACAATGCATATGTCTCTACATATATATTCTGATTTGACTAAACTTGTTTTATTTAGTTTTTTTGTTTGCTATCTTCTTTCTCTTATATTGAAGAAGTTTTTCTAGAGTTGTGTTTGCATTTCAATCTTCTCCAAAAAATATCCTTTGGATTTGCTTAAACTTATTAATCATGCCAGTCAAATTCACTATACTGAAAAAGGTTTCTAAGAGTTCTCATGCTATTCTTCATGCTTTACCTTCAGACTGTCTTTACCTACTTTTTGTCTGGCGTACTGGGTGTATGAGAGGGAGCTGGAGTTCCAACATCTTTCCAAGAGTTACCACCTTTTCAGGAGCTGATCTCAGAAAAAAAAAGTACAGACAGGGACAGGTAGAATAGCTATAAAACTCGAAGATGTTTGCTATGTCTTTTGGCCCATTGTGACTGCTATAACAAAATGCTATAAAATTTGGGTAGATTATAAATAAAAAAGAAATCATTTCTCACTCTTTTGGAGGCTGGGGAGTTTAAGAAAAAGGTGCCAGAGAATTTGATGTCTGGTAAGGCCTACTTTCTGGTTCATAGATGGCACCTTCTGAATTCTGTCCTCACATGGTGGCAAGGTCCCTTGGGCCACTTTAAAAAGGTACTAATCCCATTCATGAGGGAACCTTACCAATTATGTAATTGCCTCTCAAGGGTGTTATTTCCTAATAACATCATATTGTGGTTGAGGATTCCAGCATATAGATTTTCAGGCCATTGTACTATGTTAAGCGTGCTTTTACTAACAGGTAAGCACTAAACTAATAATGCCTTAATAATTGAGATTTAGTCTTCTCAGTTCATAAAACGTCTGGAGGACAGAATTTGCTAGCAAAGGTTTAATGGTTAAGTGTTATCATAACTCTAGGTCACCATCTTATACTACCTCAATTTGTATTGTAGTACCCTTTACACTCAACCTGCAATTAGCACTTACTCTGTGCCAATCTTTTCTTTTAAAATAGACAATTTTTTTTCGCATTTAATCCTTACAGAAAAACTATAAGGTAGATCTTGTTATTTCTCCCTCAGATGAGTCAATGGGAAATAAAAATCTTTACCAAAAATTTCCAACAAACTTCACGTTATTTCTTATTGGCCAACACTGAGTCACAGCTTCTTCCTTTGCTAGGGACTGGATTTTTATTTCATGAAATCAAAAGATCTGTGTCTATACCAGAAAAAAAAAAATTAGGGTTTTGTTACCAGGCAAAAATGCAAGTAGAAATAATAGTCTCCAAACTAAAATCTTTGTGGAAGAATTGAAATTATGGGAGAAATAAATCAAAAGTTCATAGTGGGTACAATGAGAGATAACTTATGCAAATTATATGAGCCACATAATTGATATTATTGATATCATTGCTATTACTTAGATTTAAATACATAAGTAAATAAAATGCTTTCAATGTTTTTTATTTTTTAAATAGAATGAAAAGTTTTTATAATAGATGAAAACAATAAAGATGAAACCACTATAACATTAAGAATTATAAAATCTTATTGTATTGAACTTATTGTCTTTGAATGTATTCAAGTGAATTTATAAATAAATACAATAAGTGAATTGCAGCACAAAATATAATGAAATCCAAAGATCAAGTGCATGTTTTGACCATCAGTATTGTGTTTTGGCAGGAGATATGTAGAATTGATCATTAAAGGCTTTTTAGAACTGTTGGAGAAAAAAGTCTAAAAAACATTTTAAACTATATACTATAAAGTATGACAGTTAATGAAGTTAAAGTGTATGTAAAACTGTAGAAATATACTATAAAATAGGACAGTTAATGAAGGTAAAGTGTAGTAAAACTATAGAAAACAAGAAATAGAATTTGGAAAAATACCATGTTTTGAGATATCTTTGTAAATCCATGCAACTATATTTGTAATAAAATTTTTAACAAAAATATGAGCTTATGGTTATGTAAGCTGTATGGGATGAGGTTTAAGATTAGATCACGGTGATGATAAAACACAAATTGTGCAAAGAAACATTTAATTCATTAGTTATGTGAAGCATAATATACAGTCATGGAAGTTCATACCTCTTGCAGTCAAATTTTCCAGCAATCCAGTGCTAGCTTAAGTATAAAACTATTATTTCTGAAGTTGCTTTCTAATATATTCCACTCGTAAATAACTTCTATTTTTTATCATCCTTTTTAGCATTTCATTTGTATCTCTTAATGAAAGAAAATGAAAACTTTTAGAGCCACATAATTGATATCATTTGTATCAATTACGGTAACATCTGGTAGTTAGCAGTATATTCATGGACCTAAGCTTTCTCTCTTACTAAAGAGTCTAACTTCCCTAATGGTATATATGTAATTTTTGGTTTTTCTCTGTATTCAGTACCATTCCCCTGATGCTGACCGACATGTATAGAGAACAGAATACAGTGTATTTTTATTGATAAAATTCAGAATATTGATTTAATGGTAGCAGAGTTGTTTATTAAAAAAAAAATAAGCACAACAGTTCCCAACAACAAGCTACCAACCCCTTGTTAATTGAAGGAAAATACCTAAGACTTACTTATAAAACCTACATACAGAATTTTTTGAAAAAAAAATTTTAGTTAAAATATGAACTCAATGACTTCTATATTATTCCCATCTTTTAATACTATGTTATTGCTTAATTCTTACTAAATTGTGCATTCATTATTAATAGAAACTATAAGAATTCAAACTAATAAGAAGATTTTTAATTGCTACAAAGACATTTTAAAATAAGATTAAATCCAAAGAAATCTATATTACACATCATAGATTTGTTAAAATTGCTGATGTTTTTCTGACATTTGTATGGGTTTATGTGCTTAAGAATCAGGTGCGAATCTTGATAAAAATATACATATTCAGAATGTACCATTTGATATTTTAAATCTTTGGGGATAAGGGTGAGAGAAGATTCAACATTTTTATCAATTTCTCAAGCTGATTTTGATACACCATGAAGTTTTATAAGAACTGATACAATTTTTTTTCTTTACTATGGCTGAAGGGTGTAAGTGAATTAAGGTGAGAAGTAATTTTCAATGCACTAGTCTAGAACTGTACAGATGACAAATGATATTTCAACAGATGAAGAAAAAATAAACTTTACTATTTATAGAAAAG	CAAATAAGTGA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4832:HG4_PB_pbsv_8534:HG2_PB_pbsv_8534:HG4_PB_SVrefine2Falcon1Dovetail_5187:HG4_PB_SVrefine2PBcRDovetail_4227:HG4_Ill_SVrefine2DISCOVARDovetail_6229:HG2_PB_SVrefine2PBcRplusDovetail_10467:HG2_PB_SVrefine2PB10Xhap12_6221:HG2_PB_SVrefine2Falcon2Bionano_4150:HG2_PB_SVrefine2Falcon1plusDovetail_11260:HG2_10X_SVrefine210Xhap12_6087:HG2_Ill_SpiralSDKrefine_16223:HG2_Ill_tnscope_995:HG4_10X_allpass_1682:HG2_10X_allpass_1447:HG4_Ill_Krunchall_12390:HG4_PB_assemblyticsfalcon_24770:HG2_PB_assemblyticsfalcon_25352:HG2_PB_assemblyticsPBcR_24577:HG4_Ill_Krunchall_12389:HG2_Ill_Krunchall_12072:HG4_Ill_MetaSV_5057:HG3_PB_assemblyticsfalcon_25200;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6087:HG2_PB_SVrefine2Falcon1plusDovetail_11260:HG2_PB_SVrefine2Falcon2Bionano_4150:HG2_PB_SVrefine2PB10Xhap12_6221:HG2_PB_SVrefine2PBcRplusDovetail_10467:HG4_Ill_SVrefine2DISCOVARDovetail_6229:HG4_PB_SVrefine2PBcRDovetail_4227;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00428388;ClusterMaxSizeDiff=0.00428388;ClusterMaxEditDist=0.00428388;PBcalls=12;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3495;DistBack=-263;DistForward=-3239;DistMin=-3239;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=7:118831249-118834754;PctSeqSimilarity=0.9569;PctSizeSimilarity=0.9989;PctRecOverlap=0.9983;SizeDiff=-4;StartDistance=-1;EndDistance=5;GTMatch=0;TruScore=98;MatchId=3779.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:50:0|1:23:1:1:18:./.:0:0:0:0:0/1:80:18:0/1:232:121:3459:.:.
chr7	120881096	HG4_Ill_SVrefine2DISCOVARDovetail_6235	GAAAAAGAAATTATAAAACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6090:HG4_Ill_Krunchall_12400:HG2_Ill_Krunchall_12081:HG4_PB_assemblyticsfalcon_24778:HG3_PB_assemblyticsfalcon_25208:HG2_PB_assemblyticsfalcon_25361:HG2_PB_assemblyticsPBcR_24585:HG2_PB_pbsv_8535:HG2_PB_SVrefine2PB10Xhap12_6223:HG3_PB_pbsv_8317:HG4_PB_pbsv_8537:HG4_Ill_MetaSV_5059:HG3_PB_HySA_13014:HG2_PB_HySA_15625:HG2_Ill_tnscope_996:HG4_PB_SVrefine2Falcon1Dovetail_5190:HG4_Ill_manta_2107:HG4_Ill_SVrefine2DISCOVARDovetail_6235:HG4_Ill_GATKHCSBGrefine_5974:HG4_10X_allpass_1683:HG3_PB_SVrefine2Falcon1Dovetail_5192:HG3_Ill_SVrefine2DISCOVARDovetail_6399:HG3_Ill_GATKHCSBGrefine_5803:HG2_PB_SVrefine2PBcRplusDovetail_10468:HG2_PB_SVrefine2PB10Xhap12_6222:HG2_PB_SVrefine2Falcon1plusDovetail_11261:HG2_Ill_manta_2454:HG2_Ill_breakscan11_1228:HG2_Ill_SVrefine2DISCOVARplusDovetail_12354:HG2_Ill_GATKHCSBGrefine_5889:HG2_10X_allpass_1448;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6090:HG4_PB_SVrefine2Falcon1Dovetail_5190:HG4_Ill_manta_2107:HG4_Ill_SVrefine2DISCOVARDovetail_6235:HG4_Ill_GATKHCSBGrefine_5974:HG4_10X_allpass_1683:HG3_PB_SVrefine2Falcon1Dovetail_5192:HG3_Ill_SVrefine2DISCOVARDovetail_6399:HG3_Ill_GATKHCSBGrefine_5803:HG2_PB_SVrefine2PBcRplusDovetail_10468:HG2_PB_SVrefine2PB10Xhap12_6222:HG2_PB_SVrefine2Falcon1plusDovetail_11261:HG2_Ill_manta_2454:HG2_Ill_breakscan11_1228:HG2_Ill_SVrefine2DISCOVARplusDovetail_12354:HG2_Ill_GATKHCSBGrefine_5889:HG2_10X_allpass_1448;NumExactMatchSVs=17;ClusterMaxShiftDist=0.118182;ClusterMaxSizeDiff=0.118182;ClusterMaxEditDist=0.118182;PBcalls=15;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-338;DistBack=6360;DistForward=-339;DistMin=-339;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=7:120881097-120881454;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3780.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:32:0|1:18:0:2:32:./.:0:0:0:0:0/1:14:16:0/1:24:9:.:.:.
chr7	121062319	HG2_10X_allpass_1449	TCTAGCTCAAGGTTTGTAAACACAGCAATCAGCACCCTGTGTCTAGCTCAGGGTTTGTGAATGCACCAATGGACACTCTGTATCCAGCTACTCTGGTGGGGACTTGGAGAACCTTTATGTCTAGCTAAGGGATTGTAAATACACCAATGGGCACTCTGTAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6092:HG3_PB_assemblyticsfalcon_25209:HG3_PB_SVrefine2Falcon1Dovetail_5193:HG2_PB_HySA_15626:HG4_Ill_Krunchall_12403:HG3_Ill_Krunchall_11795:HG4_PB_pbsv_8538:HG2_PB_pbsv_8536:HG4_Ill_svaba_11014:HG4_Ill_scalpel_8111:HG4_Ill_MetaSV_5060:HG4_Ill_GATKHC_14095:HG4_Ill_GATKHCSBGrefine_5975:HG4_Ill_250bpfermikitraw_11731:HG4_Ill_150bpfermikitraw_11257:HG4_10X_allpass_1684:HG3_Ill_svaba_10992:HG3_Ill_scalpel_8436:HG3_Ill_MetaSV_5014:HG3_Ill_GATKHC_14021:HG3_Ill_GATKHCSBGrefine_5804:HG3_Ill_250bpfermikitraw_11432:HG3_Ill_150bpfermikitraw_11130:HG3_10X_allpass_1736:HG2_Ill_svaba_10898:HG2_Ill_scalpel_8312:HG2_Ill_MetaSV_4834:HG2_Ill_GATKHC_14053:HG2_Ill_GATKHCSBGrefine_5890:HG2_Ill_250bpfermikitraw_11764:HG2_Ill_150bpfermikitraw_11073:HG2_10X_allpass_1449:HG3_PB_pbsv_8318:HG4_PB_SVrefine2PBcRDovetail_4229:HG4_PB_SVrefine2Falcon1Dovetail_5191:HG4_Ill_SVrefine2DISCOVARDovetail_6237:HG3_PB_SVrefine2PBcRDovetail_3858:HG3_Ill_SVrefine2DISCOVARDovetail_6400:HG2_PB_SVrefine2PBcRplusDovetail_10469:HG2_PB_SVrefine2PB10Xhap12_6224:HG2_PB_SVrefine2Falcon2Bionano_4151:HG2_PB_SVrefine2Falcon1plusDovetail_11262:HG2_Ill_SVrefine2DISCOVARplusDovetail_12356;NumClusterSVs=43;ExactMatchIDs=HG2_10X_allpass_1449:HG2_Ill_150bpfermikitraw_11073:HG2_Ill_250bpfermikitraw_11764:HG2_Ill_GATKHCSBGrefine_5890:HG2_Ill_GATKHC_14053:HG2_Ill_MetaSV_4834:HG2_Ill_scalpel_8312:HG2_Ill_svaba_10898:HG3_10X_allpass_1736:HG3_Ill_150bpfermikitraw_11130:HG3_Ill_250bpfermikitraw_11432:HG3_Ill_GATKHCSBGrefine_5804:HG3_Ill_GATKHC_14021:HG3_Ill_MetaSV_5014:HG3_Ill_scalpel_8436:HG3_Ill_svaba_10992:HG4_10X_allpass_1684:HG4_Ill_150bpfermikitraw_11257:HG4_Ill_250bpfermikitraw_11731:HG4_Ill_GATKHCSBGrefine_5975:HG4_Ill_GATKHC_14095:HG4_Ill_MetaSV_5060:HG4_Ill_scalpel_8111:HG4_Ill_svaba_11014;NumExactMatchSVs=24;ClusterMaxShiftDist=0.00625;ClusterMaxSizeDiff=0.00623053;ClusterMaxEditDist=0.0869565;PBcalls=13;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-160;DistBack=41531;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=194;REFWIDENED=7:121062248-121062601;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:./.:0:13:0:3:./.:0:0:0:0:1/1:0:35:./.:.:.:.:.:.
chr7	125731082	HG4_Ill_GATKHCSBGrefine_5988	TATATATATTCCTTCTAAATATATATACATATATATTCCTTCTAAATATATATAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6108:HG2_PB_HySA_15667:HG2_PB_pbsv_8551:HG3_PB_pbsv_8338:HG4_Ill_manta_2115:HG4_Ill_GATKHCSBGrefine_5988:HG4_Ill_250bpfermikitraw_11767:HG3_Ill_GATKHCSBGrefine_5826:HG3_Ill_250bpfermikitraw_11472:HG3_Ill_150bpfermikitraw_11167:HG2_Ill_manta_2459:HG2_Ill_SpiralSDKrefine_16250:HG2_Ill_GATKHCSBGrefine_5902:HG2_Ill_250bpfermikitraw_11799:HG2_Ill_150bpfermikitraw_11108:HG2_PB_SVrefine2Falcon1plusDovetail_11273:HG2_Ill_SVrefine2DISCOVARplusDovetail_12374;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11108:HG2_Ill_250bpfermikitraw_11799:HG2_Ill_GATKHCSBGrefine_5902:HG2_Ill_SpiralSDKrefine_16250:HG2_Ill_manta_2459:HG3_Ill_150bpfermikitraw_11167:HG3_Ill_250bpfermikitraw_11472:HG3_Ill_GATKHCSBGrefine_5826:HG4_Ill_250bpfermikitraw_11767:HG4_Ill_GATKHCSBGrefine_5988:HG4_Ill_manta_2115;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0934579;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.133333;PBcalls=4;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=-54;DistBack=37335;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=205;REFWIDENED=7:125731051-125731309;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:49:./.:5:14:0:13:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr7	126775610	HG3_PB_SVrefine2Falcon1Dovetail_5211	TAAGAATTAATGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1230:HG4_PB_HySA_12662:HG4_PB_pbsv_8562:HG2_PB_pbsv_8556:HG4_PB_SVrefine2PBcRDovetail_4240:HG4_PB_SVrefine2Falcon1Dovetail_5206:HG4_Ill_svaba_11060:HG4_Ill_scalpel_8141:HG4_Ill_manta_2118:HG4_Ill_SVrefine2DISCOVARDovetail_6259:HG4_Ill_Krunchall_12454:HG4_Ill_GATKHC_14151:HG4_Ill_GATKHCSBGrefine_5993:HG4_Ill_250bpfermikitraw_11780:HG4_Ill_150bpfermikitraw_11305:HG4_CG_vcfBeta_5642:HG4_10X_allpass_1690:HG3_PB_assemblyticsfalcon_25255:HG3_PB_SVrefine2Falcon1Dovetail_5211:HG2_Ill_svaba_10943:HG2_Ill_scalpel_8349:HG2_Ill_SpiralSDKrefine_16261:HG2_Ill_SVrefine2DISCOVARplusDovetail_12378:HG2_Ill_Krunchall_12134:HG2_Ill_GATKHC_14112:HG2_Ill_GATKHCSBGrefine_5908:HG2_Ill_250bpfermikitraw_11814:HG2_Ill_150bpfermikitraw_11124:HG2_CG_vcfBeta_5019:HG2_10X_allpass_1450:HG2_10X_SVrefine210Xhap12_6116:HG2_Ill_Spiral_607;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6116:HG2_10X_allpass_1450:HG2_CG_vcfBeta_5019:HG2_Ill_150bpfermikitraw_11124:HG2_Ill_250bpfermikitraw_11814:HG2_Ill_GATKHCSBGrefine_5908:HG2_Ill_GATKHC_14112:HG2_Ill_Krunchall_12134:HG2_Ill_SVrefine2DISCOVARplusDovetail_12378:HG2_Ill_SpiralSDKrefine_16261:HG2_Ill_scalpel_8349:HG2_Ill_svaba_10943:HG3_PB_SVrefine2Falcon1Dovetail_5211:HG3_PB_assemblyticsfalcon_25255:HG4_10X_allpass_1690:HG4_CG_vcfBeta_5642:HG4_Ill_150bpfermikitraw_11305:HG4_Ill_250bpfermikitraw_11780:HG4_Ill_GATKHCSBGrefine_5993:HG4_Ill_GATKHC_14151:HG4_Ill_Krunchall_12454:HG4_Ill_SVrefine2DISCOVARDovetail_6259:HG4_Ill_manta_2118:HG4_Ill_scalpel_8141:HG4_Ill_svaba_11060:HG4_PB_SVrefine2Falcon1Dovetail_5206:HG4_PB_SVrefine2PBcRDovetail_4240;NumExactMatchSVs=27;ClusterMaxShiftDist=0.021978;ClusterMaxSizeDiff=0.021978;ClusterMaxEditDist=0.032967;PBcalls=7;Illcalls=20;TenXcalls=3;CGcalls=2;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=3;CGexactcalls=2;HG2count=15;HG3count=2;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-90;DistBack=9783;DistForward=-78;DistMin=-78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=7:126775611-126775713;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:41:0|1:34:1:1:34:./.:0:0:0:0:0/1:16:26:./.:.:.:.:.:.
chr7	127620154	HG3_PB_SVrefine2PBcRDovetail_3873	TTCTTTTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCATGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_8343:HG2_PB_SVrefine2PB10Xhap12_6243:HG4_10X_allpass_1692:HG3_PB_assemblyticsfalcon_25260:HG4_PB_assemblyticsfalcon_24831:HG2_PB_assemblyticsfalcon_25414:HG2_PB_assemblyticsPBcR_24635:HG4_PB_HySA_12667:HG2_Ill_Krunchall_12139:HG2_PB_PB10Xdip_26419:HG4_PB_SVrefine2Falcon1Dovetail_5208:HG3_PB_HySA_13066:HG4_PB_SVrefine2PBcRDovetail_4243:HG4_Ill_scalpel_8144:HG4_Ill_manta_2119:HG4_Ill_MetaSV_5072:HG4_Ill_GATKHCSBGrefine_5996:HG3_PB_SVrefine2PBcRDovetail_3873:HG3_PB_SVrefine2Falcon1Dovetail_5214:HG3_Ill_scalpel_8473:HG3_Ill_MetaSV_5022:HG3_Ill_GATKHCSBGrefine_5831:HG3_10X_allpass_1739:HG2_PB_SVrefine2PBcRplusDovetail_10483:HG2_PB_SVrefine2PB10Xhap12_6242:HG2_PB_SVrefine2Falcon1plusDovetail_11277:HG2_Ill_scalpel_8351:HG2_Ill_manta_2463:HG2_Ill_SpiralSDKrefine_16264:HG2_Ill_GATKHCSBGrefine_5911:HG2_10X_allpass_1451:HG2_10X_SVrefine210Xhap12_6119:HG2_PB_HySA_15690:HG3_Ill_MetaSV_5021:HG2_Ill_tnscope_998:HG2_Ill_breakscan11_1231:HG2_Ill_MetaSV_4841:HG2_PB_pbsv_8560:HG4_PB_pbsv_8567;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6119:HG2_10X_allpass_1451:HG2_Ill_GATKHCSBGrefine_5911:HG2_Ill_SpiralSDKrefine_16264:HG2_Ill_manta_2463:HG2_Ill_scalpel_8351:HG2_PB_SVrefine2Falcon1plusDovetail_11277:HG2_PB_SVrefine2PB10Xhap12_6242:HG2_PB_SVrefine2PBcRplusDovetail_10483:HG3_10X_allpass_1739:HG3_Ill_GATKHCSBGrefine_5831:HG3_Ill_MetaSV_5022:HG3_Ill_scalpel_8473:HG3_PB_SVrefine2Falcon1Dovetail_5214:HG3_PB_SVrefine2PBcRDovetail_3873:HG4_Ill_GATKHCSBGrefine_5996:HG4_Ill_MetaSV_5072:HG4_Ill_manta_2119:HG4_Ill_scalpel_8144:HG4_PB_SVrefine2PBcRDovetail_4243;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0669856;ClusterMaxSizeDiff=0.0669856;ClusterMaxEditDist=0.092504;PBcalls=19;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=26878;DistForward=127090;DistMin=26878;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=7:127620155-127620483;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:34:0|1:23:4:0:29:./.:0:0:0:0:0/1:38:22:0/1:16:8:.:.:.
chr7	127766414	HG2_Ill_manta_2464	TGGGCACAGCATCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_HySA_12669:HG3_PB_assemblyticsfalcon_25262:HG4_PB_assemblyticsfalcon_24833:HG2_PB_assemblyticsfalcon_25418:HG2_PB_assemblyticsPBcR_24637:HG4_Ill_Krunchall_12459:HG3_Ill_Krunchall_11842:HG2_Ill_Krunchall_12141:HG4_Ill_Spiral_707:HG2_PB_HySA_15694:HG2_Ill_Spiral_608:HG3_PB_pbsv_8345:HG2_PB_pbsv_8562:HG4_Ill_MetaSV_5073:HG3_PB_HySA_13071:HG3_Ill_MetaSV_5023:HG2_Ill_tnscope_999:HG2_Ill_MetaSV_4842:HG4_PB_pbsv_8568:HG4_PB_SVrefine2PBcRDovetail_4244:HG4_PB_SVrefine2Falcon1Dovetail_5209:HG4_Ill_scalpel_8145:HG4_Ill_SVrefine2DISCOVARDovetail_6264:HG4_Ill_GATKHCSBGrefine_5997:HG4_10X_allpass_1693:HG3_PB_SVrefine2PBcRDovetail_3875:HG3_PB_SVrefine2Falcon1Dovetail_5215:HG3_Ill_scalpel_8474:HG3_Ill_manta_2021:HG3_Ill_SVrefine2DISCOVARDovetail_6428:HG3_Ill_GATKHCSBGrefine_5832:HG3_10X_allpass_1740:HG2_PB_SVrefine2PBcRplusDovetail_10484:HG2_PB_SVrefine2PB10Xhap12_6245:HG2_PB_SVrefine2Falcon2Bionano_4165:HG2_PB_SVrefine2Falcon1plusDovetail_11279:HG2_Ill_scalpel_8352:HG2_Ill_manta_2464:HG2_Ill_SVrefine2DISCOVARplusDovetail_12382:HG2_Ill_GATKHCSBGrefine_5912:HG2_10X_allpass_1452:HG2_10X_SVrefine210Xhap12_6120:HG2_Ill_breakscan11_1232;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6120:HG2_10X_allpass_1452:HG2_Ill_GATKHCSBGrefine_5912:HG2_Ill_SVrefine2DISCOVARplusDovetail_12382:HG2_Ill_manta_2464:HG2_Ill_scalpel_8352:HG2_PB_SVrefine2Falcon1plusDovetail_11279:HG2_PB_SVrefine2Falcon2Bionano_4165:HG2_PB_SVrefine2PB10Xhap12_6245:HG2_PB_SVrefine2PBcRplusDovetail_10484:HG3_10X_allpass_1740:HG3_Ill_GATKHCSBGrefine_5832:HG3_Ill_SVrefine2DISCOVARDovetail_6428:HG3_Ill_manta_2021:HG3_Ill_scalpel_8474:HG3_PB_SVrefine2Falcon1Dovetail_5215:HG3_PB_SVrefine2PBcRDovetail_3875:HG4_10X_allpass_1693:HG4_Ill_GATKHCSBGrefine_5997:HG4_Ill_SVrefine2DISCOVARDovetail_6264:HG4_Ill_scalpel_8145:HG4_PB_SVrefine2Falcon1Dovetail_5209:HG4_PB_SVrefine2PBcRDovetail_4244:HG4_PB_pbsv_8568;NumExactMatchSVs=24;ClusterMaxShiftDist=0.106452;ClusterMaxSizeDiff=0.106452;ClusterMaxEditDist=0.106452;PBcalls=18;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=574;DistForward=-303;DistMin=-303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:127766415-127766742;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:0:25:1:25:./.:0:0:0:0:1/1:0:36:./.:2:12:.:.:.
chr7	127792064	HG2_Ill_GATKHCSBGrefine_5913	ATGTGTTTAGGTCCACAGCACATTATCACCGTGCACGCGTGTTTAGGTCCACAGCACATTATCACCGTGTACGCGTGTTTAGGTCCACAGCACTTTATCACCGTGCACG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_8346:HG3_Ill_Krunchall_11843:HG2_Ill_Krunchall_12142:HG2_PB_pbsv_8563:HG4_PB_SVrefine2Falcon1Dovetail_5210:HG3_PB_SVrefine2PBcRDovetail_3876:HG3_Ill_SVrefine2DISCOVARDovetail_6429:HG2_PB_SVrefine2PBcRplusDovetail_10485:HG2_PB_SVrefine2Falcon2Bionano_4166:HG2_PB_SVrefine2Falcon1plusDovetail_11280:HG2_Ill_SVrefine2DISCOVARplusDovetail_12383:HG2_10X_SVrefine210Xhap12_6121:HG4_PB_assemblyticsfalcon_24834:HG2_PB_assemblyticsfalcon_25419:HG2_PB_assemblyticsPBcR_24638:HG3_PB_HySA_13072:HG3_Ill_svaba_11044:HG3_Ill_manta_2022:HG3_Ill_GATKHC_14090:HG3_Ill_GATKHCSBGrefine_5833:HG3_Ill_250bpfermikitraw_11488:HG3_Ill_150bpfermikitraw_11185:HG2_Ill_svaba_10948:HG2_Ill_SpiralSDKrefine_16265:HG2_Ill_GATKHC_14118:HG2_Ill_GATKHCSBGrefine_5913;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5913:HG2_Ill_GATKHC_14118:HG2_Ill_SpiralSDKrefine_16265:HG2_Ill_svaba_10948:HG3_Ill_150bpfermikitraw_11185:HG3_Ill_250bpfermikitraw_11488:HG3_Ill_GATKHCSBGrefine_5833:HG3_Ill_GATKHC_14090:HG3_Ill_manta_2022:HG3_Ill_svaba_11044;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.0458716;PBcalls=11;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=-108;DistBack=18197;DistForward=26627;DistMin=18197;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=143;REFWIDENED=7:127791986-127792236;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3786.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:22:./.:22:8:6:21:./.:0:0:0:0:0/1:22:19:./.:.:.:.:.:.
chr7	128309210	HG3_10X_allpass_1741	GTTGAACACCAGCTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCCAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1233:HG4_10X_allpass_1694:HG4_PB_HySA_12678:HG2_PB_assemblyticsfalcon_25424:HG2_PB_assemblyticsPBcR_24642:HG4_Ill_Spiral_708:HG3_PB_pbsv_8352:HG4_PB_pbsv_8575:HG2_PB_pbsv_8570:HG2_PB_HySA_15704:HG4_PB_assemblyticsfalcon_24838:HG4_Ill_scalpel_8149:HG4_Ill_SVrefine2DISCOVARDovetail_6269:HG4_Ill_GATKHCSBGrefine_6000:HG3_PB_assemblyticsfalcon_25265:HG3_Ill_scalpel_8479:HG3_Ill_SVrefine2DISCOVARDovetail_6430:HG3_Ill_GATKHCSBGrefine_5838:HG2_Ill_scalpel_8356:HG2_Ill_manta_2466:HG2_Ill_GATKHCSBGrefine_5918:HG2_10X_SVrefine210Xhap12_6125:HG4_PB_SVrefine2PBcRDovetail_4246:HG2_PB_SVrefine2PBcRplusDovetail_10490:HG2_PB_SVrefine2PB10Xhap12_6252:HG2_PB_SVrefine2Falcon1plusDovetail_11284:HG3_PB_HySA_13084:HG3_Ill_MetaSV_5026:HG2_Ill_tnscope_1000:HG2_Ill_MetaSV_4845:HG4_PB_SVrefine2Falcon1Dovetail_5215:HG4_Ill_scalpel_8148:HG4_Ill_manta_2123:HG3_PB_SVrefine2PBcRDovetail_3879:HG3_PB_SVrefine2Falcon1Dovetail_5218:HG3_Ill_scalpel_8478:HG3_Ill_GATKHCSBGrefine_5837:HG3_10X_allpass_1741:HG2_Ill_scalpel_8355:HG2_Ill_SVrefine2DISCOVARplusDovetail_12387:HG2_Ill_GATKHCSBGrefine_5917:HG2_10X_allpass_1453:HG2_10X_SVrefine210Xhap12_6124;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6124:HG2_10X_allpass_1453:HG2_Ill_GATKHCSBGrefine_5917:HG2_Ill_SVrefine2DISCOVARplusDovetail_12387:HG2_Ill_scalpel_8355:HG3_10X_allpass_1741:HG3_Ill_GATKHCSBGrefine_5837:HG3_Ill_scalpel_8478:HG3_PB_SVrefine2Falcon1Dovetail_5218:HG3_PB_SVrefine2PBcRDovetail_3879:HG4_Ill_manta_2123:HG4_Ill_scalpel_8148:HG4_PB_SVrefine2Falcon1Dovetail_5215;NumExactMatchSVs=13;ClusterMaxShiftDist=0.172308;ClusterMaxSizeDiff=0.172308;ClusterMaxEditDist=0.172308;PBcalls=17;Illcalls=21;TenXcalls=5;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-604;DistForward=20266;DistMin=-604;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:128309211-128309528;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=0.9969;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=3787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:54:1/1:1:32:2:29:./.:0:0:0:0:1/1:0:31:./.:2:13:.:.:.
chr7	128730887	HG2_Ill_svaba_10958	AGGTCCCTTCTGGCTCTGATGTGTGTGATTCAGGTGAGGTTGTTGAAGAGAAGTGGGCTGCAGCATTG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11137:HG2_Ill_SpiralSDKrefine_16274:HG4_Ill_manta_2124:HG2_Ill_manta_2467:HG2_PB_PB10Xdip_26428:HG2_Ill_Krunchall_12153:HG2_PB_HySA_15707:HG4_PB_pbsv_8577:HG4_PB_assemblyticsfalcon_24843:HG4_Ill_svaba_11074:HG4_Ill_scalpel_8152:HG4_Ill_Krunchall_12467:HG4_Ill_GATKHC_14166:HG4_Ill_GATKHCSBGrefine_6002:HG4_Ill_250bpfermikitraw_11793:HG4_Ill_150bpfermikitraw_11317:HG4_CG_vcfBeta_5655:HG4_10X_allpass_1695:HG2_PB_pbsv_8572:HG2_PB_assemblyticsfalcon_25429:HG2_PB_assemblyticsPBcR_24646:HG2_Ill_svaba_10958:HG2_Ill_Krunchall_12152:HG2_Ill_GATKHC_14130:HG2_Ill_GATKHCSBGrefine_5920:HG2_Ill_250bpfermikitraw_11829;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11137:HG4_PB_pbsv_8577:HG4_PB_assemblyticsfalcon_24843:HG4_Ill_svaba_11074:HG4_Ill_scalpel_8152:HG4_Ill_Krunchall_12467:HG4_Ill_GATKHC_14166:HG4_Ill_GATKHCSBGrefine_6002:HG4_Ill_250bpfermikitraw_11793:HG4_Ill_150bpfermikitraw_11317:HG4_CG_vcfBeta_5655:HG4_10X_allpass_1695:HG2_PB_pbsv_8572:HG2_PB_assemblyticsfalcon_25429:HG2_PB_assemblyticsPBcR_24646:HG2_Ill_svaba_10958:HG2_Ill_Krunchall_12152:HG2_Ill_GATKHC_14130:HG2_Ill_GATKHCSBGrefine_5920:HG2_Ill_250bpfermikitraw_11829;NumExactMatchSVs=20;ClusterMaxShiftDist=0.10219;ClusterMaxSizeDiff=0.10219;ClusterMaxEditDist=0.130435;PBcalls=7;Illcalls=17;TenXcalls=1;CGcalls=1;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=1;HG2count=14;HG3count=0;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-67;DistBack=9531;DistForward=1588;DistMin=1588;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=7:128730888-128730956;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3788.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:42:./.:20:16:12:21:./.:0:0:0:0:0/1:29:19:./.:.:.:.:.:.
chr7	133107672	HG3_PB_SVrefine2PBcRDovetail_3898	TAATAGAATTAATGGAGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1234:HG2_10X_allpass_1455:HG4_PB_pbsv_8603:HG4_Ill_Krunchall_12503:HG3_Ill_Krunchall_11883:HG2_PB_pbsv_8595:HG2_Ill_Krunchall_12187:HG2_PB_assemblyticsfalcon_25469:HG3_PB_pbsv_8376:HG4_PB_assemblyticsfalcon_24885:HG3_PB_assemblyticsfalcon_25305:HG4_Ill_MetaSV_5081:HG3_Ill_MetaSV_5034:HG2_Ill_tnscope_1001:HG2_Ill_MetaSV_4856:HG4_PB_SVrefine2PBcRDovetail_4265:HG4_PB_SVrefine2Falcon1Dovetail_5238:HG4_Ill_manta_2131:HG4_Ill_SVrefine2DISCOVARDovetail_6290:HG4_Ill_GATKHCSBGrefine_6020:HG4_10X_allpass_1698:HG3_PB_SVrefine2PBcRDovetail_3898:HG3_PB_SVrefine2Falcon1Dovetail_5242:HG3_Ill_scalpel_8508:HG3_Ill_manta_2030:HG3_Ill_SVrefine2DISCOVARDovetail_6454:HG3_Ill_GATKHCSBGrefine_5851:HG3_10X_allpass_1745:HG2_PB_SVrefine2Falcon1plusDovetail_11305:HG2_Ill_manta_2474:HG2_Ill_GATKHCSBGrefine_5939:HG2_10X_SVrefine210Xhap12_6144;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6144:HG2_Ill_GATKHCSBGrefine_5939:HG2_Ill_manta_2474:HG2_PB_SVrefine2Falcon1plusDovetail_11305:HG3_10X_allpass_1745:HG3_Ill_GATKHCSBGrefine_5851:HG3_Ill_SVrefine2DISCOVARDovetail_6454:HG3_Ill_manta_2030:HG3_Ill_scalpel_8508:HG3_PB_SVrefine2Falcon1Dovetail_5242:HG3_PB_SVrefine2PBcRDovetail_3898:HG4_10X_allpass_1698:HG4_Ill_GATKHCSBGrefine_6020:HG4_Ill_SVrefine2DISCOVARDovetail_6290:HG4_Ill_manta_2131:HG4_PB_SVrefine2Falcon1Dovetail_5238:HG4_PB_SVrefine2PBcRDovetail_4265;NumExactMatchSVs=17;ClusterMaxShiftDist=0.107692;ClusterMaxSizeDiff=0.107692;ClusterMaxEditDist=0.107692;PBcalls=11;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=10639;DistForward=-314;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=7:133107673-133108022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:36:0|1:27:2:1:41:./.:0:0:0:0:0/1:23:31:0/1:28:4:.:.:.
chr7	133785000	HG2_PB_SVrefine2PBcRplusDovetail_10510	CTGCCACAAGCCTAGGAACCATTAGAAGCCAGGGAAGAGGCCTGGAACAGCTCCTTCCCCAGCACCTTCAGAGGGAGCAAGCCTCTACCAACAACCTGATTTTGAACTCCTCGCCTCCAGAACTGTGAGACAATATATTTCTGTTGTTTTAAGCCACCCAGCATGTGGTACTTGGTTACAGCAGCCCTGGCAAACAAATACAGGTTTGTAGGACTGTATCTTTAGAGATGAAAAGGAGAACCTCAAGCGGAAGGAAGAGCATGAGCTTACTGGGGTAAGAATATGTATTTATATATTGAGTGCATTCAGCAGTTCGGTTCTACTGGAACCACGGTCTGTAAAGGAGCCATGTATGGGAAGGTTATTGTGGCCAAGTAACAGAGGCTTTGAATGCTGGAAAAGACATCTAAATTTTGGAGCCAGGCACGGTGGCTCACGCATGTAATCCCAGCACTTTGAGAGACCGAAGCAGGTAGATCACGAGGTCAAGAGATAGAGAGTATCCTGGCCAACATGGTGAAACCCCTTCTCTACTAAGAATACAAAAACTAGCTGGGCGTGGTGGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAGCCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATTGCAGCACTGCACTCCAGCCTGGTGACAGAGCAAGACTCCATCTAAAAAAAAAAAAAGACATCTACATTTTTATCTGGCAGAGTTTGCTTCTTTTGTGTTAATATTTACTTCTATCTATCTTGGCCTAAAATGATTTGAGGTGGCTGACCTTAGCATGTAGATCATGGGGAACCAGGTTGTGTGCCAGGAAGTGACTTGATCGGCACCTGCACAGGAAGATGATCTCGGATGCAACTCCTTGGAGAAACAGAGTCAAGCAGCAGCCCAGGTGAGAAGCTTGGCCATCATCTGAAAACTATGCAAAGCAGGTCTGAACTAGGAAAAGGGCAGAAGGTCAGAGAAGAGGGGATAAAGACAAGAGGTGAAATGATAGGTTGACCTGGCAAATGCTTGCATGACACAGGAAGAGAGAGAAAGGAATTGAATGGAACGTGGTCAACATTTGAGCCTGGTGACTGTGAGGACAGTGGTGCCATTTGCAGATTTAGGAGGAAGCATCACGTTGGGGAGGTGGAGGAGTTGGTTTTGTGCACATTGACTCTGAGGTGGTGGAGGGGTCCAGCAGGCAGTTGGACTTATGAGAAAATGCACCATTATTCATCCAAACAAGATAATTGAATTTTTGAAGGCAGCTAAAAAATAATGGTTCTACGCTACAAGAAATGAAGTGAAATGGTAAAACAACAACAACGACAAAAAAACATACACACACACACACAAAAAGCAAAAAACAAAATAACCCACCCAATTAATCCATTTGGAGGTTGTTCTCATCTAGTGAAATGTGTGTGTGTGTGTGTGGGTGTGTGTGCACTTCAGTACTGTTAACAAAGAAAAGGTCTGGTCAGTGGCAAAAACTACTTGAATGCTGCTTTCAGCAAAGTCATCCCTCTCTTCAGAAGGATGAAGTACTCTTGTTTGTCAAGGAAGGTCCCTCTCAACTAGAAAAACAGCTGCAGGAACTCCAACCCAAGGTCCCCACAGCCCACAGGGGTGATCTCTTGCTTTGCTCTCCTGGCTGTCTCAGGAAGCAGAAGTGGAAACATTTGAGATGACAGCAGCTCTGCTTTCTTTGTAGAGTTAATTAGCTGGTGAATACTGAGCTCTCCGACAGAGAGGAAGCTCGGGTTATCAAAGTATTATTAATTGATGCATCTGGAGAAAGAGAGAAGCAGCCCCATCTGGACAGAGCTTGGATTCTTTTAGCGCCAGAATGGAAGAAAGCCCTTTTTAAAGTACAGTAAGAAAAGCCTGGTTCAGCTAAACAGTGAGGGGTAGTAGAATCTAACTCGCACTCAACCCTACTTAACACCTTCCATTCTTAAGTATTTATTAAGCCCGGTACAAGTGACAAATACCACATGTGATCTGTTGTCACCAAAACTCATTAAGACAAATAATATTGAATAAGATCACACAGGATGGCTTGCCATCAGAACTACTTACTACTTCAGGCCGGGTGCCATGGCTCATGCCTGTAATCCCAGCACTTTTGGTAGCTGAGGCAGGTGGGTCACCTGAGGCAAGGAGTTCGAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGCGTGGTGGTGGGTGCCTGTAATCCCAGCTACTCAGGAAGCTGAGCCAGGAGAATCACTTCAACCCAGGAGGCGGAGGTTGCAGCGAGCCAAGATTGCACCACTGCACTTCAACCTGGGCGAAAGAGCAAGGCTGCATCTAAAACAAACAAACAAATAAACAAACAAGCAAACAAACTACTTACTACTTCCAATAGAAATAGAATACCAGCCACATGTAATTTTAAACTTTCTTTTTTTTTCTTTTAGGGACAGTTTCGCTCTTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCTCCACCTCCCAGTTGGTTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGAGACCACCACCACACCCGGCTAATTTTTTATATTTTTAGTAGGGACAGTGTTTCATCATGTTGTCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCCACCTCTGCCTCCTAAAGTGCTGGGATTACAGGCATGGGCCACCAGGCCCAGCCAATAATTTTAAACTTTCTAGTAGCCACACTTAAAAAAGTAAAAAGAAACAAGCAAAGTTAATTTTAATAATATATATACTACATAATATATATTAAATAATATATTATATAAATACAATATTAATATAATATATTATATAAATACAATATTAACATAATATATTATATAAATACTATATTAATATAATATATAAATACTATATTAATATATTATATAAATACTATATTAATATATTATATAAATACTATATTAATATAACATATAAATACTATATTAATATAACATATAAATACTATATTAATATAATATATAAATACTATATTAATATAATATATTATATAAATACTATATCAATATAATATATTATATAAGTACTATATTAATATAGTATATAAATACTATATTAATATAATATAGTATATAAATACTATATTAATATATTATATAAATACTATATTAATATAATATATAAATACTATAATAATATATAAATAATATATTAATATTATATATAATTATATATTAAATTACATATAATATATAAATATATATTATATAATATATAAATATATATTAAATTATATAAAATATATATTAAATTATATATATAAAATATATATTAAATAATATATAAAATATATATTAAATAATATATAAAATATATATTATGTAAAATATATATTAAATAATATATAAAATATATATTATATAATATATAAAACATAAATAATATATAAAACATATATTAAATAATATATAAAATATAAAACATATATTATATAATATATAAAATTTATATATTATATATTATATAAATATATTTATTATATATATTATATAAATATATATTTATATATAATATAAATATATATTATATATTATATAATATATTAAAATATATATAATTAATATAATATATATTAATAATATGTATTATTTAACCCAGTGTGTCCAAAATATTACCATTTCAACATGCAATCCATATTTTAAAATTATTGAAGTATTTTACTTTTTTTTGGTATGAAGTCTTCAAAATCCAGCATATACTTTACACTTAAAGTGTATCTCAGTTTTAAGTGTTTGAGGGTCCCATGTGGCTGGTGGCCCACTTATTGGGAAGCACAGCACCATCTCTTCTGAACAGAAGACTTCAATCCTTGCTATTTATACAAACCCATTCTCTAGTTATGGCCTCACACCTCATTTTCACAATGGATGATCTTTCTTCTGATTAAAAAAAAAATTTAGACAAGATACACTTAACAGAATTGATTTGAGCAAGGAACAATTCATGAATTGGGCAACAGTCCAATTCAGCAGGAGAGGTTCAGAGAGCTCTGTAGCTGTAGCAGCATGGGCAGTGAGCTTATATAGGCTGGCATGGAAGTAACACAAAGAAAATCTATTTCATTGCTTAGAGTAGAAAGATCTTAGTTGCAGGTTTATTGGCAGTTTCTGGTTGGTGAAGTTTTCAGTTTCGTTTTATCGTTTACATCAGGCGTTGGTCTGCTTACGTAGAAACTTAAAATATTGGAGTCACCCCAGTCTAATGATTCCCCATCCCCAGATTTTTTTAACACTTCAAAATGTGTGACCAATTAATTTGCTAGAGATTTCTTCAAAATTATAAGGTATTTCCTCCTGTTTAAAAGCTAGAGGACTCAGGGCCGTACGTGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCAAGGCCAGCGGATCACTTTAGTTCAGGAGTTTGAGACCAGCCTGACCAACATGGCAAAACCCAGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCATGCACCTGTAGTCCTAGCTACTAGGGAGGCTGAAGTATGAGAATGGCTTGAACCAGGGAGGTGGAGATTGCAGTAAGCTGAATTGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCTAAAAATAAAAATAAAAAATAAAAGCTACAGGACTCAGTTTACAGATATTATTTTGTGCTGATGGGGTTCAGGATATGCTACTCCAAAATATGGTACCTTGACATATCGAATATCATAGGCTGAAAGAATTTGAGAAAACCAAAGAAGCAGGAGGGTCACTTTCTGACTTTCTTTCACACTTCTCTTCTGAAGCAGGTCATAAAACCTAGGAAGGATTTTCTGACCTTCCCCTGAAGCAGGTTCTAAGACTCTTATTCAAGAGGTGCCCTCTCTACACCTGCAGGAAAGGAAAGTTCTTATCTTTGAGGATACAAAGACACAGAGAAGAATCTGAACAAATAGACCTTGCTAAGATCTCCCTAGTTTATTACCATCAAATCATCCCCCCTTTATGCAGTCATATCTCTCCATGACTGTCCATTCTTCACTAAACTTAGCATAAAAATATACTTAAAGTGCTTCTTTGGGTTATTTCTTTATAAAGCCTCCATGTATGTAAAACTTATTCAATAAATTCGTATGCTTTTTCTCTTGTTAATCTATCTTTTGTTTCTGGATTTAGCCATGAAGCTAGCAATGGATGAGGAAAAGATGTTTTTGTTCCCCTACAGTGCAAAAGCAAGCTTGAATCTCAAATTTTAATGGAAAGGAATTGGGGAGAAAGAGAGCATTTACCCAGTGGTTTTTTCTATGTGCCACATACCATGCTAGGCACTGCATTTACACTATTTCATGTAATTCTTACATTCAACTGAGCAACACATGTATTACCACCATTTTTCCATTGGGAAAACTGCGGATATAAGAGGATAAATGCCTTGCCCGAGTACATATTACCAGTAACAGCTGGTGTTACCAGTAAAGGCCCTAATTTTCAGTATTACTGGTCCTTTTTACTGTAAGCATCATAGGGACAGAGGCCAACTCTACTGGCAGTACTTGGTAGATTTCCGTATCTCTGTCATTGAACAAGTCACATGGCGTGTGTTACAGTGTGCTCTTTTAGTTTTGCCATCTGTAGGTGGCTTGTGTTAATCAGCTCAATTAGACCCTGTGCCTTATCACAAAGACAGAGGGCTTTCTGTATTCGGGGGTTCTTGCCTTAGTGTACTGGAAAAATTGGATCACACATGGGCTTGGAGAATGAGGGCAAGGTTTTATTGAGTGGTCAAAGTAACTCTCAGCAGATGGATAGGAGCCAGAAGCGGGGTGGTCTTTCCCTGGAGTTGGGCCCCTCAGCAGCCGGGTTCTCTTCCAACCACCCTTGGCTGAACTCCACGTTGTCCTGTTGTAGATGGCCTGCCAGTGTCTCTGGTGTCTGCCGGTGTGCTTTTCTGCCAGTATGTTCCTCTTGACATCCAGCCACTTGTGTCTGTGCCCACTAGGGTTTTGGGGGTTTTACAGGCACAGGATAGGGGCGTGGCAGGCCAGGGTGGTCTTGGAAAATGCAGTATTTGGGTATGAAAACAGAAATGCCTGTCCTCACCTAGGTCCTTGGGCACAGGCCTGAGGGTGGAGCCCTAGCCAGGGACCATGCCCTTTTCTACCCAGCACTTCCCTGCCCTCCTCCTGTATCAAATGCAGGCCATGTGGTATCCAAGACTGTCTCACATTCTCATCAAGGTATGTGGCTCATTGGATGCAGCCCATCCCACTGCCCCCATCCCACCCCACAGCAGTACCATGAAGACCTCACTCAGCACAACACTGAAGCCACGTACACCTACTGATAGGGTAGGGCAGACAGGAAACCTTATCCACAGACAGAAGCTAAGGCAGCTGCCCACTCTCTACCCTGGGAAGCCCCAGCCCCTCTCCTGTTAAACTCTTGTTCCCTCAGGTGAGGCTGAGGGATGAGACTTTACTCAACATCCTGGAGCTGGCTCTTCCTCATGCACAGCCTTTGAAGATCCCATGGAAAAGGGGTGGCAGCTAGCAGCAATAAAATATGTTACTGGTGGAGGATGTCCAGGTTCTTGGCATTTTTTTTTTTTTTTGAGACTGTCACTCTGTTGCCCAGGCTATAGTGTAGTGGTGCAATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGTAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGTGTGCCACCATGCCTGGCTAATTTTTGTATTTTTCATAGAGACAGGGTTTCACCATGTTAGTCAGGCTGGTCTCGAACTCCTGACCTCATGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAACCACTGTGGCCAGCCGGTTCTTGGCATCTTGAACAAAGAATTGGACAAGACGCACAGACAAAGCAAGGAAAGAATGAAGCAACAAAAGCGGAGATTTTTTGAAAATGAAAGTATACTCCACAGAGTGGGAGCGGGCCAAGCACAGGGGCTCAAGAGCCGGTTAAAGAATTTTCTGCCATTTAAATACCCTCTAGAGGTTTCCATTGGTTACTTGGTGTATGCCTTATGTAAATGAGGAAGATGAAGTAAAGTTGCAAACTCATTTACTTGGTGTATGCACTGTGTAAATGGAAAGGATATTTCCTGTCATAGCTGAAGTGTTTCCATTTGATTTAGTTCTAGGAAGTCAGCGTGAATTGGCCTTATGTTCCCTGCCTCCAGATCTTGTTCTCCTGCCTCAATAATACTACATTTTAAAAAGTGGTTGAAGAGAGCTCCTCATTGCAGAGGGAAGGCAGCAGTGCACAACAAGGGGAAATGGGCTAGTTAAGAGGAGAGGTCAAGAAAAGGGTGAGGTGGAAAAAATAGTGGGGGGCCTGCAACCTGCAGAGTCCTGCAGTTGATCTGCAAAGTGAAAGAAGCAGGGGCTGACTCCCCTCTTCTGCCCCGCTCCTCCCGTCTCACTTCCAAGGCTCACCTGCCCTTTCTTCCTCAGCTGGTAAAAAATGGGACCCTGATTTGTACTCTCTGCTTACTTTACCCTGATTTATTTCCCTTTCAAGAGTATAAGCTGAGGGCAGAGACTTGACTTTACTTGAGTTTATATCTTGCACCACACTTATCACAGTGCTTTGCACAAGTAGGCAATCCACACCATTTGGTGAATTTAATGATGAAGATCTGGGGTGCCCTGTGAATTTAAGATTGTAAAGGGGTTAAGAGTAAAAAGACACAGAGAATATTGAGACATTCATTTGCATTTGAGAGAGAGGAGTGGGAGGAGGATACAGAGAGGGACCGAATTGGGACAAGAGGTACAAGTGGGGTACAGTCTGCAGACCCTTGAAAAGCCCCGGATAAATCACATTAAAGAGCTCGAGCCTGAATGACTGCTTTTGGTGGACAGATACCTGTTTGATCTTAAAAAAGAACATGGGAGAGAAGTTTCCTCTGGCTCCCTGTGTAATTGCTCTGCATTTCAGAAAGAAAGCTCTCTAAATTACAAGGAAAGAAATGAATGTGTAGTAATTAATTGCCCCAGCTTCTCCCAAAAAAAAAAAAGAAAGAAAAAGGTGACATAGCTTAAGTAACCATTTCACCACTGGAAACATCCAAAGGCAGTTACCATCATCAAGGGAAATAATAAAAGACCCAAGCTGGTTTTCTGTGGGATGCACAGAATGTGGTAGAAAGAGCATGGGTTTAGGGATCGGAAGACCTAGGTTGACATTTTTTGCGGCACCACTGAGTAGCTTATGTGCTCTCAGTCTTAGGCAAGTCACCTAAACTCCTAAACTATGTTTGTCCCTCTGCAAAATGGGGATAATAATTCCCACCATTATAACTATTAAGAAACAGAAAGTGTGTAAAGAACTCAGTATAATGCCTGGATTATTGAAGGTGCCCTTACTGTGAAATCCCTTTATTCTATACGTGTCCAAAATGGTGGCAGTACCTGGTGGGCCAGCTGCTTATTAATTTGCTAGCAGGTTGACATCCTAGATTTGTTTTCAGAAGAAATGCATTAAATAATTTACAGTTCCACAACATCCACAGAGAAAACTGGTAGGATTGGGTATCTTCATAAAATATTGAGGAAGGGAGGCACCTAGAGGCAGTCAAGCAAATTAGGAGGCTCAAACTGAAAAGGAAAACATTGGCATGCTTTCTCTCCTCACTAGGACTTGGTACTCCACTTGTTCACTAGTCTATGATAGTGAGAACTGTTGGGTACAAAAAGAGCTCCACTGGCCCCCATTTCTGCTGCTTTCTGTTAGCCCCTGGTCCATAGCTCCATTAGTACATAATCGCATTGTATTACAACACCCATCCATCTTTATGAGTCGTTTGGACTTAGTTCACTTTCTCCTGCTAGACCACGGGTTAGCCTAGGCACCTTTTTAAAAACTTTTCTTGTCTTCCTAAGGGAAATTCCAGGAATCTAGAAGCTTCTGTGTAGTATGTAAATTATAGAGAAAGACTGCCGTTTTCCAACTGAAATATGACCCCTTTTAGTGCTGAGATGAGGTCACGGGATGTTCATTTCCTCGTATCTTTAAGGGATAGCTGCAAAGTTAACAGAGCTACTTTCAGAGGAGCCATTAGGAAGGCAAGGGAGGGCTGAGGCTCTGACCCACGTTTCATTTTTGTAAGGGTCGGCCATCTTCCTGCTGAGTTATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACACAGTCTCGCTCCATTGCCCAGGCTGGAGTGCCGTGGCACGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGATTCAGCCTCCTGAGTAGCTGGGATCACAGGCACCCTTCTCCACTCCCAGCAAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGCGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGAAAGTGCTGGGATTACAAGCATGAGCCACTGCCTGGCCTTATTCCCTTCTTTTTCTTTTTTCTTTTCTTTTTTTTTTAATCTCAGCCTCTCGTGGCAGCTCTCTAACTGTTGTTCTTTGAGAGGGAGTTCTTGTTCCTCTATTCTAGTAGAGCGGCTCCAAGTTTATGGAATCAGCTTTCTTTGATTTGCTGTTGTTCCTCCAGAAGTTGTGTGCTTACCAGAGTTGCTTTAAGAAGAATGTTTGATTTTCTAGTAATAGTCTTGAGTTGAGCAGTGGTGGCTTCATCCTTGTTTTGCATTTCTACATATTCCTCATGTGGTGATACTTCTTCACCTTAGACACTTTGGTCTTTGAGTGGTTGAGCTCAGAATTGTAGCTTTGACAGTCTACAGCCTAAATTCTACAGTTTGTCACATAATTAAAATGCCTGTGCTCTTTTGCCCTCAATTAATACATCAATGGGCCTGCTTAACAATGAAATGTATCTAGTTTCTGTGTTTATTATCTGAAATCATGAACAAGGTAGGTGAGTAGCCCTGGTGATCCTAATAGTAGACCAGCATTTGTTTTGGGAAGGGAAGGCAGGCTAGGGTGGGAAGGGATAATCAGGCTGCAAACCCAAGTCCTATGCCCTATAGGAGAGGAAATTGTCTCCTTCTATCCATCTTAGGTGCATCTCAGGGGCCCCAAAAGACAGACAAACTTATTTAATGTAAGTTTTATGTGATACAGGAGCCTTCATAAGGAAGACCTGAAGAAGTGGTTAAACCTGAGTATTTTCTTTTTTTTTTTTTTTTTTTTGGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCAGCCTCAGCTCACAGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGACGCATGCCACCACACCCGGCTAATTTTTTTTTTTTTTTTTTGGATTTTAGTAGAGACAAGGTTTCACTGTGTTGCCCAGGCTGGTTTCAAACTCCCGAGCTTAGGCAATTCACCCGCCTTGGCCTCCCAAACTGTTGAGAATACAGGCGTGAGCCACCGCACCTGGCCCTGAGTATTTTTTAATAGTAGGTTTGATGAAGAGCAGAAAATTGTGGAGAAATATGATAGGGCAAAAAGGGAATGATCTAATGGTAATAAACTGAGGGAAACTTAGCAAGGCCTGTTCAGATTCTTCTTGCCATCTCTGTGTCTTCAAAGATAAGAATGTTATTTCTTCCACATGCAGGTGGGCACCTCCCACATTAGAGTCTTTTGACCTGCTTCAGGGGAGGGTCAGCAAATCCTTTTTAGGTTTTATGACCTGCTACAGGAGGTTGGGGAGGGTGGGTGGCAGTCAGATTGACCTTTCTGCTTCTGTAGTTTTCTCATATTCTTTCAGTATAAAATATTCAGTACACCAAGGTGATATTTTTGGGGTAACATTTCTCACACTCCATCATCCCCAGGTAAGTTCTGGGCACCAACTAATATCTCAACGATGGAAGTTTGCTAAAGGCTTAAAGCCAATAGCCACACTGTTACTTGAAGGTAAGTGGACTTGTCTTTGATCCTGAATGACATGACCTTCCCTGTTAAAGCACCTGATCCTTTTCTGGACAATGTCTGGCCGGTGCGTACGTTGGTGTCCAGTGCTCTCTTCCCCTGGGTTGAGGTGCTTGCCTCTGCTCTTTCTTCTTGCCCTCCCTCATTTGTTTCCTTACCCCTGGAAACAGTATTGCTGCTTCCCATCTGAGTCTGCTTATGCAATCAAGACTCGGCATAGACCATGGTGTATTCTTTTCTCTCCCTATCTTTCCCTTCTGTTCATCTATTTCTTTCTAAGCAATTCAAATGACAACCTCTTCCTACAATGGCAGCCTGTCTGGTAGATACTGTTGTAAAACAATACAGATCTTTTTCTTCTTTACTCAGAAAAACTAATGTCTTTTGTGGTCAAAAGAAAATGAGTAGCAGCTAAAAGTAGAATTTTAATGACAAAACAACCTAATTGTTATTCAGCTTTAACTTTCAATCCTACCTCCTGTTCCACAAATTCGTATTAATTCATCAGCTAAATAATGTGGCTTCTACTAAAGATTCTGACATCTAATTCTCTGCCTGTGCAGGTTTATTGCCAGGGTGAAAAATACTTTGTCTTTATATTTTCATTTTTAAAAACAAGCATAATGAAAATATAAAATATCATTTAGGATTTATCTAAGAAGATTTGGCAGCTTCTTTGAGAAATGGTTAGATAAAGAAATATGGATCAAATTTAGAAGTCGTCTCTCCTAGCCTTAAGTCATTATTTCAATACGTATGAACTGATTAGATGGGGAGAAGATCTCTCTATCTATAGTTTTAACTATGATCCATGTCCACTTATTTATTTTAAAAAGTTTAACATAAAGAGTAATTTTTGAGACAACAAAGGATTAGGAAGTAGCCATGTAACTGTAAATTGTGATGGTTATTATCCTTGAAATAGGTTGGGTTTACAACTCTCATGCCTGGCTGTCTACCTACTGTAACAAGAGGATACAATCCCTTTGAAAGAGGACTAAAAGAGCAAGAGCAAGAGAAATAGAACACTTGGGTAGTCCCAGTGTCATAGCTCTCATTCACTTCTGATATGATAAATTTTGCTTAATGTAATCCAGTCCTGCGTTCACTTGTTATGTCCAAATTATAAATATATTTCTGTGGCTGAGTGATACATAAACAATGCTTAACATCTTGTCTGGGTTTAGGGAGACTGGAGAAACCCTCCTGGATCCTTTAAGCTGCTGGTAGTGTAAAATCCTATTACTTGTCTGCATATAATAATTATATTAATCACTGCTCAGTAAGAGATGTTGGTCTTTTACATCAAGTTTTCCCTTTGGAATCTTAGCCTTTAAAACACACACACACACACACCCCTCAGAATTTTCCTTCCCTTTCTTTCCCCCACAGTTCCCCTCCCCATACCAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAGAAAGAAAAGAAAAAAGAAAAAAAAGCACAGGAGACATGACTCCTGGGTCTCTCTCACTTAACCATCAACTTCCAAACAGGATGTAAGTACCATGGTGAATATCTCTCTAGACTAATTAGTTTTGTTGGCTCCTTTCAAATGGTTGTCTTTATGTTCATGTATCATTCTTATTGGGCAGGAGCCCAGCAGGAAATATTTGGCCCACTCAAAATTCTGAAGAGAATTTAATAAAGGGTCTATTTACAGAGGTATGGGCAAGGTTAAGGAAACCAACAAAGGATGCTGAGGTCCCCGGGGCCTAGCCACAGCAGGAAGCTGAAGGATCAAGAGAAGCAAACGATATTTTTTTAAAAAGCAGTAGGGTCTTTTCAACAGATGATGTTGGGACTACTGGATATCCACATGCAGAAGAATGAAATTGCACCCTTATCTCACACCATATATAAAAATCAACTCAAAATGGATTAAAACTTGGCCAGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGCAGGGCCAGGGCAGCTGGATCACCTGAGGTCAGGCGTTCGGGCCCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTATCTGGGTGCAGTGGCACATGCCCATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6148:HG3_PB_pbsv_8379:HG3_10X_allpass_1746:HG2_10X_allpass_1456:HG3_Ill_Krunchall_11893:HG2_Ill_tnscope_1002:HG4_PB_SVrefine2Falcon1Dovetail_5241:HG3_PB_SVrefine2PBcRDovetail_3900:HG3_PB_SVrefine2Falcon1Dovetail_5245:HG3_Ill_SVrefine2DISCOVARDovetail_6458:HG3_Ill_MetaSV_5035:HG2_PB_pbsv_8599:HG2_PB_SVrefine2PBcRplusDovetail_10510:HG2_PB_SVrefine2PB10Xhap12_6279:HG2_PB_SVrefine2Falcon2Bionano_4191:HG2_Ill_MetaSV_4857;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6148:HG4_PB_SVrefine2Falcon1Dovetail_5241:HG3_PB_SVrefine2PBcRDovetail_3900:HG3_PB_SVrefine2Falcon1Dovetail_5245:HG3_Ill_SVrefine2DISCOVARDovetail_6458:HG3_Ill_MetaSV_5035:HG2_PB_pbsv_8599:HG2_PB_SVrefine2PBcRplusDovetail_10510:HG2_PB_SVrefine2PB10Xhap12_6279:HG2_PB_SVrefine2Falcon2Bionano_4191:HG2_Ill_MetaSV_4857;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00052523;ClusterMaxSizeDiff=0.00052523;ClusterMaxEditDist=0.00052523;PBcalls=8;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-13329;DistBack=30895;DistForward=-13327;DistMin=-13327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=7:133785001-133798332;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:85:54:0|1:44:0:0:26:./.:0:0:0:0:0/1:50:18:0/1:448:176:13246:.:.
chr7	136834449	HG2_Ill_GATKHCSBGrefine_5949	TGACAAAGGACAATTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCCCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCCGACCTTGTGATCCACCCGCCTCGGCCTCCCAGAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1235:HG2_PB_HySA_15792:HG2_PB_assemblyticsPBcR_24719:HG4_PB_assemblyticsfalcon_24922:HG2_PB_assemblyticsfalcon_25502:HG4_Ill_Krunchall_12538:HG3_Ill_Spiral_9325:HG2_Ill_Spiral_613:HG2_PB_pbsv_8615:HG4_PB_pbsv_8626:HG3_PB_pbsv_8400:HG4_Ill_MetaSV_5088:HG3_Ill_MetaSV_5043:HG2_Ill_tnscope_1003:HG2_Ill_MetaSV_4864:HG4_PB_SVrefine2PBcRDovetail_4278:HG4_PB_SVrefine2Falcon1Dovetail_5252:HG4_Ill_scalpel_8193:HG4_Ill_manta_2138:HG4_Ill_SVrefine2DISCOVARDovetail_6308:HG4_Ill_GATKHCSBGrefine_6032:HG4_10X_allpass_1702:HG3_PB_SVrefine2PBcRDovetail_3909:HG3_Ill_scalpel_8537:HG3_Ill_manta_2037:HG3_Ill_GATKHCSBGrefine_5865:HG3_10X_allpass_1749:HG2_PB_SVrefine2PBcRplusDovetail_10519:HG2_PB_SVrefine2PB10Xhap12_6289:HG2_PB_SVrefine2Falcon2Bionano_4203:HG2_PB_SVrefine2Falcon1plusDovetail_11317:HG2_Ill_scalpel_8415:HG2_Ill_manta_2482:HG2_Ill_SpiralSDKrefine_16325:HG2_Ill_SVrefine2DISCOVARplusDovetail_12429:HG2_Ill_GATKHCSBGrefine_5949:HG2_10X_SVrefine210Xhap12_6161;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6161:HG2_Ill_GATKHCSBGrefine_5949:HG2_Ill_SVrefine2DISCOVARplusDovetail_12429:HG2_Ill_SpiralSDKrefine_16325:HG2_Ill_manta_2482:HG2_Ill_scalpel_8415:HG2_PB_SVrefine2Falcon1plusDovetail_11317:HG2_PB_SVrefine2Falcon2Bionano_4203:HG2_PB_SVrefine2PB10Xhap12_6289:HG2_PB_SVrefine2PBcRplusDovetail_10519:HG3_10X_allpass_1749:HG3_Ill_GATKHCSBGrefine_5865:HG3_Ill_manta_2037:HG3_Ill_scalpel_8537:HG3_PB_SVrefine2PBcRDovetail_3909:HG4_10X_allpass_1702:HG4_Ill_GATKHCSBGrefine_6032:HG4_Ill_SVrefine2DISCOVARDovetail_6308:HG4_Ill_manta_2138:HG4_Ill_scalpel_8193:HG4_PB_SVrefine2Falcon1Dovetail_5252:HG4_PB_SVrefine2PBcRDovetail_4278;NumExactMatchSVs=22;ClusterMaxShiftDist=0.111864;ClusterMaxSizeDiff=0.111864;ClusterMaxEditDist=0.111864;PBcalls=14;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-302;DistBack=26;DistForward=-288;DistMin=-288;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=7:136834450-136834768;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3791.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:1/1:0:32:1:19:./.:0:0:0:0:1/1:0:42:0/1:1:8:.:.:.
chr7	136851610	HG3_Ill_manta_2040	TAAAATCTAACTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3910:HG4_Ill_Krunchall_12542:HG3_Ill_Krunchall_11930:HG2_Ill_Krunchall_12231:HG3_PB_assemblyticsfalcon_25345:HG2_PB_assemblyticsPBcR_24720:HG4_PB_assemblyticsfalcon_24924:HG2_PB_assemblyticsfalcon_25503:HG2_PB_pbsv_8618:HG4_PB_pbsv_8628:HG3_PB_pbsv_8401:HG2_PB_HySA_15794:HG4_PB_HySA_12762:HG4_Ill_MetaSV_5089:HG3_Ill_MetaSV_5044:HG2_Ill_tnscope_1004:HG2_Ill_MetaSV_4866:HG4_PB_SVrefine2PBcRDovetail_4279:HG4_PB_SVrefine2Falcon1Dovetail_5253:HG4_Ill_scalpel_8196:HG4_Ill_manta_2139:HG4_Ill_SVrefine2DISCOVARDovetail_6309:HG4_Ill_GATKHCSBGrefine_6037:HG4_10X_allpass_1703:HG3_PB_SVrefine2Falcon1Dovetail_5258:HG3_Ill_manta_2040:HG3_Ill_GATKHCSBGrefine_5868:HG3_10X_allpass_1750:HG2_PB_SVrefine2PBcRplusDovetail_10520:HG2_PB_SVrefine2PB10Xhap12_6290:HG2_PB_SVrefine2Falcon2Bionano_4204:HG2_PB_SVrefine2Falcon1plusDovetail_11318:HG2_Ill_scalpel_8419:HG2_Ill_manta_2485:HG2_Ill_SVrefine2DISCOVARplusDovetail_12430:HG2_Ill_GATKHCSBGrefine_5953:HG2_10X_allpass_1458:HG2_10X_SVrefine210Xhap12_6162;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6162:HG2_10X_allpass_1458:HG2_Ill_GATKHCSBGrefine_5953:HG2_Ill_SVrefine2DISCOVARplusDovetail_12430:HG2_Ill_manta_2485:HG2_Ill_scalpel_8419:HG2_PB_SVrefine2Falcon1plusDovetail_11318:HG2_PB_SVrefine2Falcon2Bionano_4204:HG2_PB_SVrefine2PB10Xhap12_6290:HG2_PB_SVrefine2PBcRplusDovetail_10520:HG3_10X_allpass_1750:HG3_Ill_GATKHCSBGrefine_5868:HG3_Ill_manta_2040:HG3_PB_SVrefine2Falcon1Dovetail_5258:HG4_10X_allpass_1703:HG4_Ill_GATKHCSBGrefine_6037:HG4_Ill_SVrefine2DISCOVARDovetail_6309:HG4_Ill_manta_2139:HG4_Ill_scalpel_8196:HG4_PB_SVrefine2Falcon1Dovetail_5253:HG4_PB_SVrefine2PBcRDovetail_4279;NumExactMatchSVs=21;ClusterMaxShiftDist=0.095082;ClusterMaxSizeDiff=0.095082;ClusterMaxEditDist=0.095082;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=13619;DistForward=3046;DistMin=3046;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:136851611-136851936;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3792.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:5:26:0:27:./.:0:0:0:0:1/1:0:45:0/1:2:8:.:.:.
chr7	137455271	HG4_10X_allpass_1704	ACTCAGTGGGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1236:HG4_PB_assemblyticsfalcon_24930:HG2_PB_assemblyticsfalcon_25510:HG3_PB_assemblyticsfalcon_25352:HG2_PB_assemblyticsPBcR_24728:HG3_Ill_Krunchall_11932:HG2_PB_pbsv_8622:HG2_Ill_Krunchall_12235:HG2_Ill_Spiral_614:HG3_PB_pbsv_8405:HG2_PB_HySA_15804:HG4_PB_HySA_12772:HG4_Ill_MetaSV_5091:HG3_Ill_MetaSV_5045:HG2_PB_HySA_15803:HG2_Ill_tnscope_1005:HG2_Ill_MetaSV_4868:HG4_PB_pbsv_8633:HG4_PB_SVrefine2PBcRDovetail_4283:HG4_PB_SVrefine2Falcon1Dovetail_5257:HG4_Ill_scalpel_8203:HG4_Ill_manta_2141:HG4_Ill_SVrefine2DISCOVARDovetail_6316:HG4_Ill_GATKHCSBGrefine_6040:HG4_10X_allpass_1704:HG3_PB_SVrefine2Falcon1Dovetail_5261:HG3_Ill_scalpel_8543:HG3_Ill_GATKHCSBGrefine_5873:HG2_PB_SVrefine2PBcRplusDovetail_10524:HG2_PB_SVrefine2PB10Xhap12_6294:HG2_PB_SVrefine2Falcon2Bionano_4208:HG2_PB_SVrefine2Falcon1plusDovetail_11321:HG2_Ill_scalpel_8424:HG2_Ill_manta_2488:HG2_Ill_SVrefine2DISCOVARplusDovetail_12438:HG2_Ill_GATKHCSBGrefine_5957:HG2_10X_allpass_1459:HG2_10X_SVrefine210Xhap12_6165;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6165:HG2_10X_allpass_1459:HG2_Ill_GATKHCSBGrefine_5957:HG2_Ill_SVrefine2DISCOVARplusDovetail_12438:HG2_Ill_manta_2488:HG2_Ill_scalpel_8424:HG2_PB_SVrefine2Falcon1plusDovetail_11321:HG2_PB_SVrefine2Falcon2Bionano_4208:HG2_PB_SVrefine2PB10Xhap12_6294:HG2_PB_SVrefine2PBcRplusDovetail_10524:HG3_Ill_GATKHCSBGrefine_5873:HG3_Ill_scalpel_8543:HG3_PB_SVrefine2Falcon1Dovetail_5261:HG4_10X_allpass_1704:HG4_Ill_GATKHCSBGrefine_6040:HG4_Ill_SVrefine2DISCOVARDovetail_6316:HG4_Ill_manta_2141:HG4_Ill_scalpel_8203:HG4_PB_SVrefine2Falcon1Dovetail_5257:HG4_PB_SVrefine2PBcRDovetail_4283:HG4_PB_pbsv_8633;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0827815;ClusterMaxSizeDiff=0.0827815;ClusterMaxEditDist=0.0827815;PBcalls=17;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=69638;DistForward=17804;DistMin=17804;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=7:137455272-137455591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3793.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:./.:1:0:0:0:./.:0:0:0:0:1/1:0:53:./.:2:19:.:.:.
chr7	138322188	HG3_Ill_manta_2043	GATAGATAGATAGATATATATATATAGATATAGATATAGATATAGATAGATATATATATATATAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6170:HG3_PB_pbsv_8410:HG3_PB_HySA_13172:HG2_PB_HySA_15815:HG4_PB_HySA_12779:HG4_PB_assemblyticsfalcon_24938:HG4_PB_pbsv_8639:HG4_Ill_svaba_11141:HG4_Ill_manta_2142:HG4_Ill_Krunchall_12550:HG4_Ill_GATKHC_14265:HG4_Ill_GATKHCSBGrefine_6045:HG4_Ill_250bpfermikitraw_11874:HG4_Ill_150bpfermikitraw_11401:HG3_Ill_svaba_11128:HG3_Ill_manta_2043:HG3_Ill_Krunchall_11941:HG3_Ill_GATKHC_14201:HG3_Ill_GATKHCSBGrefine_5877:HG3_Ill_250bpfermikitraw_11585:HG3_Ill_150bpfermikitraw_11283:HG2_Ill_svaba_11022:HG2_Ill_manta_2489:HG2_Ill_Krunchall_12246:HG2_Ill_GATKHC_14234:HG2_Ill_GATKHCSBGrefine_5959:HG2_Ill_250bpfermikitraw_11913:HG2_Ill_150bpfermikitraw_11212:HG2_Ill_breakscan11_1237:HG2_PB_HySA_15814:HG2_PB_pbsv_8626:HG4_Ill_SVrefine2DISCOVARDovetail_6321:HG3_PB_SVrefine2PBcRDovetail_3914:HG3_Ill_SVrefine2DISCOVARDovetail_6491:HG2_PB_SVrefine2PBcRplusDovetail_10527:HG2_PB_SVrefine2PB10Xhap12_6297:HG2_PB_SVrefine2Falcon2Bionano_4211:HG2_PB_SVrefine2Falcon1plusDovetail_11326:HG2_Ill_SVrefine2DISCOVARplusDovetail_12444;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11212:HG2_Ill_250bpfermikitraw_11913:HG2_Ill_GATKHCSBGrefine_5959:HG2_Ill_GATKHC_14234:HG2_Ill_Krunchall_12246:HG2_Ill_manta_2489:HG2_Ill_svaba_11022:HG3_Ill_150bpfermikitraw_11283:HG3_Ill_250bpfermikitraw_11585:HG3_Ill_GATKHCSBGrefine_5877:HG3_Ill_GATKHC_14201:HG3_Ill_Krunchall_11941:HG3_Ill_manta_2043:HG3_Ill_svaba_11128:HG4_Ill_150bpfermikitraw_11401:HG4_Ill_250bpfermikitraw_11874:HG4_Ill_GATKHCSBGrefine_6045:HG4_Ill_GATKHC_14265:HG4_Ill_Krunchall_12550:HG4_Ill_manta_2142:HG4_Ill_svaba_11141;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0787402;ClusterMaxSizeDiff=0.0787402;ClusterMaxEditDist=0.0793651;PBcalls=13;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-64;DistBack=-45;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:138322187-138322268;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:46:1/1:1:8:3:12:./.:0:0:0:0:1/1:0:43:./.:.:.:.:.:.
chr7	138742268	HG3_Ill_GATKHCSBGrefine_5879	AAACAATTACATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTCAGCCTCCCACAGTGCTGGGATTACAGACGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1006:HG4_PB_assemblyticsfalcon_24943:HG2_PB_assemblyticsfalcon_25527:HG3_PB_assemblyticsfalcon_25365:HG2_PB_assemblyticsPBcR_24744:HG4_Ill_Krunchall_12555:HG4_Ill_Spiral_717:HG3_Ill_Spiral_9340:HG2_PB_HySA_15821:HG2_Ill_Spiral_616:HG2_PB_pbsv_8631:HG4_PB_pbsv_8646:HG4_PB_SVrefine2PBcRDovetail_4290:HG4_PB_SVrefine2Falcon1Dovetail_5264:HG4_Ill_scalpel_8212:HG4_Ill_manta_2145:HG4_Ill_SVrefine2DISCOVARDovetail_6324:HG4_Ill_GATKHCSBGrefine_6049:HG4_10X_allpass_1707:HG3_PB_pbsv_8416:HG3_PB_SVrefine2PBcRDovetail_3918:HG3_PB_SVrefine2Falcon1Dovetail_5267:HG3_Ill_scalpel_8556:HG3_Ill_manta_2044:HG3_Ill_SVrefine2DISCOVARDovetail_6492:HG3_Ill_GATKHCSBGrefine_5879:HG3_10X_allpass_1752:HG2_PB_SVrefine2PBcRplusDovetail_10532:HG2_PB_SVrefine2PB10Xhap12_6302:HG2_PB_SVrefine2Falcon2Bionano_4215:HG2_PB_SVrefine2Falcon1plusDovetail_11331:HG2_Ill_scalpel_8432:HG2_Ill_manta_2491:HG2_Ill_SVrefine2DISCOVARplusDovetail_12449:HG2_Ill_MetaSV_4870:HG2_Ill_GATKHCSBGrefine_5962:HG2_10X_allpass_1460:HG2_10X_SVrefine210Xhap12_6174:HG2_Ill_breakscan11_1239:HG4_Ill_MetaSV_5098:HG3_Ill_MetaSV_5049;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6174:HG2_10X_allpass_1460:HG2_Ill_GATKHCSBGrefine_5962:HG2_Ill_MetaSV_4870:HG2_Ill_SVrefine2DISCOVARplusDovetail_12449:HG2_Ill_manta_2491:HG2_Ill_scalpel_8432:HG2_PB_SVrefine2Falcon1plusDovetail_11331:HG2_PB_SVrefine2Falcon2Bionano_4215:HG2_PB_SVrefine2PB10Xhap12_6302:HG2_PB_SVrefine2PBcRplusDovetail_10532:HG3_10X_allpass_1752:HG3_Ill_GATKHCSBGrefine_5879:HG3_Ill_SVrefine2DISCOVARDovetail_6492:HG3_Ill_manta_2044:HG3_Ill_scalpel_8556:HG3_PB_SVrefine2Falcon1Dovetail_5267:HG3_PB_SVrefine2PBcRDovetail_3918:HG3_PB_pbsv_8416:HG4_10X_allpass_1707:HG4_Ill_GATKHCSBGrefine_6049:HG4_Ill_SVrefine2DISCOVARDovetail_6324:HG4_Ill_manta_2145:HG4_Ill_scalpel_8212:HG4_PB_SVrefine2Falcon1Dovetail_5264:HG4_PB_SVrefine2PBcRDovetail_4290;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0866774;ClusterMaxSizeDiff=0.0866774;ClusterMaxEditDist=0.0866774;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-164;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=7:138742269-138742599;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3797.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:./.:12:23:1:18:./.:0:0:0:0:1/1:1:37:./.:2:12:.:.:.
chr7	139109587	HG2_Ill_GATKHCSBGrefine_5965	GCCAGGCTTGTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTGTTTTTTTTTTTGTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6178:HG4_Ill_Krunchall_12557:HG4_10X_allpass_1708:HG2_10X_allpass_1461:HG2_Ill_tnscope_1007:HG4_PB_pbsv_8648:HG4_Ill_scalpel_8213:HG4_Ill_MetaSV_5099:HG4_Ill_GATKHCSBGrefine_6051:HG2_PB_pbsv_8634:HG2_Ill_MetaSV_4871:HG2_Ill_GATKHCSBGrefine_5965:HG4_PB_SVrefine2PBcRDovetail_4292:HG3_PB_SVrefine2Falcon1Dovetail_5270:HG2_PB_SVrefine2Falcon1plusDovetail_11335;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_5965:HG2_Ill_MetaSV_4871:HG2_PB_pbsv_8634:HG4_Ill_GATKHCSBGrefine_6051:HG4_Ill_MetaSV_5099:HG4_Ill_scalpel_8213:HG4_PB_pbsv_8648;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0962861;ClusterMaxSizeDiff=0.0962861;ClusterMaxEditDist=0.238095;PBcalls=5;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-365;DistBack=8764;DistForward=-362;DistMin=-362;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=324;REFWIDENED=7:139109279-139109967;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3798.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:18:0|1:30:0:0:15:./.:0:0:0:0:0/1:27:14:0/1:30:7:.:.:.
chr7	139207147	HG2_PB_SVrefine2PBcRplusDovetail_10534	TAAAAGGGGCCGGGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4295:HG4_Ill_Krunchall_12559:HG2_PB_assemblyticsfalcon_25533:HG2_Ill_Krunchall_12255:HG2_PB_SVrefine2Falcon1plusDovetail_11336:HG2_PB_pbsv_8637:HG2_PB_PB10Xdip_26490:HG4_Ill_MetaSV_5100:HG2_PB_HySA_15825:HG2_Ill_tnscope_1008:HG2_Ill_MetaSV_4874:HG4_10X_allpass_1709:HG2_PB_SVrefine2PBcRplusDovetail_10534:HG2_PB_SVrefine2PB10Xhap12_6307:HG2_PB_SVrefine2Falcon2Bionano_4218:HG2_Ill_scalpel_8436:HG2_Ill_manta_2493:HG2_Ill_SVrefine2DISCOVARplusDovetail_12452:HG2_Ill_GATKHCSBGrefine_5966:HG2_10X_allpass_1462:HG2_10X_SVrefine210Xhap12_6181:HG2_PB_SVrefine2PB10Xhap12_6306;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6181:HG2_10X_allpass_1462:HG2_Ill_GATKHCSBGrefine_5966:HG2_Ill_SVrefine2DISCOVARplusDovetail_12452:HG2_Ill_manta_2493:HG2_Ill_scalpel_8436:HG2_PB_SVrefine2Falcon2Bionano_4218:HG2_PB_SVrefine2PB10Xhap12_6307:HG2_PB_SVrefine2PBcRplusDovetail_10534:HG4_10X_allpass_1709;NumExactMatchSVs=10;ClusterMaxShiftDist=0.19542;ClusterMaxSizeDiff=0.19542;ClusterMaxEditDist=0.26087;PBcalls=10;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=14;DistForward=-240;DistMin=-240;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=68;REFWIDENED=7:139207148-139207530;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3799.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:28:0|1:18:1:2:24:./.:0:0:0:0:0/1:23:18:0/1:25:5:.:.:.
chr7	140608586	HG4_Ill_GATKHCSBGrefine_6059	CTTTAGATGAACTCTAGGACTTGATTTCTGTCCTCTTCACCCCAATGGTCCACCAAAACCAAAGCCCAACTTGTACAGATTGGCAACTGCCTTTAGGGCAAAAGCTACTTCATCCACTTATTTATTTGGATTCTTGTTTATTCCTAGAATTTGGCCTGGCAGCTCCCCACTATCTTTTCAGCTCTGCAACTGCTCTACGTTTTCTTTTTTTTTTTTTT	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_12265:HG2_PB_PB10Xdip_26504:HG2_PB_SVrefine2PB10Xhap12_6315:HG2_PB_assemblyticsPBcR_24762:HG4_PB_HySA_12793:HG2_PB_HySA_15837:HG2_Ill_Spiral_617:HG4_Ill_scalpel_8222:HG4_Ill_manta_2149:HG4_Ill_MetaSV_5102:HG4_Ill_GATKHCSBGrefine_6059:HG2_PB_SVrefine2PBcRplusDovetail_10538:HG2_PB_SVrefine2PB10Xhap12_6314:HG2_PB_SVrefine2Falcon1plusDovetail_11341:HG2_Ill_scalpel_8446:HG2_Ill_manta_2495:HG2_Ill_breakscan11_1240:HG2_Ill_SpiralSDKrefine_16347:HG2_Ill_SVrefine2DISCOVARplusDovetail_12455:HG2_Ill_MetaSV_4876:HG2_Ill_GATKHCSBGrefine_5971:HG2_10X_SVrefine210Xhap12_6190:HG4_PB_pbsv_8660:HG2_PB_pbsv_8648;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6190:HG2_Ill_GATKHCSBGrefine_5971:HG2_Ill_MetaSV_4876:HG2_Ill_SVrefine2DISCOVARplusDovetail_12455:HG2_Ill_SpiralSDKrefine_16347:HG2_Ill_breakscan11_1240:HG2_Ill_manta_2495:HG2_Ill_scalpel_8446:HG2_PB_SVrefine2Falcon1plusDovetail_11341:HG2_PB_SVrefine2PB10Xhap12_6314:HG2_PB_SVrefine2PBcRplusDovetail_10538:HG4_Ill_GATKHCSBGrefine_6059:HG4_Ill_MetaSV_5102:HG4_Ill_manta_2149:HG4_Ill_scalpel_8222;NumExactMatchSVs=15;ClusterMaxShiftDist=0.115741;ClusterMaxSizeDiff=0.115741;ClusterMaxEditDist=0.115741;PBcalls=10;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-217;DistBack=11922;DistForward=-215;DistMin=-215;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1240;REFWIDENED=7:140607350-140618667;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3801.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:26:0|1:22:0:0:24:./.:0:0:0:0:0/1:28:17:./.:.:.:.:.:.
chr7	141113863	HG3_10X_allpass_1753	TCCAAAAACATCATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCCCGCTGTTTAGCCCAGGCCGGATTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1241:HG2_PB_HySA_15838:HG2_PB_assemblyticsfalcon_25552:HG4_PB_assemblyticsfalcon_24963:HG3_PB_assemblyticsfalcon_25387:HG2_PB_assemblyticsPBcR_24765:HG4_Ill_Krunchall_12571:HG2_Ill_Krunchall_12268:HG3_PB_pbsv_8427:HG2_PB_pbsv_8651:HG4_PB_pbsv_8663:HG3_Ill_MetaSV_5054:HG2_Ill_tnscope_1010:HG2_Ill_MetaSV_4877:HG4_PB_SVrefine2Falcon1Dovetail_5274:HG4_Ill_manta_2150:HG4_Ill_SVrefine2DISCOVARDovetail_6332:HG4_Ill_MetaSV_5103:HG4_Ill_GATKHCSBGrefine_6060:HG4_10X_allpass_1710:HG3_PB_SVrefine2PBcRDovetail_3924:HG3_PB_SVrefine2Falcon1Dovetail_5281:HG3_Ill_scalpel_8565:HG3_Ill_manta_2045:HG3_Ill_GATKHCSBGrefine_5886:HG3_10X_allpass_1753:HG2_PB_SVrefine2PBcRplusDovetail_10540:HG2_PB_SVrefine2PB10Xhap12_6317:HG2_PB_SVrefine2Falcon2Bionano_4226:HG2_PB_SVrefine2Falcon1plusDovetail_11343:HG2_Ill_scalpel_8448:HG2_Ill_manta_2496:HG2_Ill_SVrefine2DISCOVARplusDovetail_12457:HG2_Ill_GATKHCSBGrefine_5972:HG2_10X_SVrefine210Xhap12_6195;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6195:HG2_Ill_GATKHCSBGrefine_5972:HG2_Ill_SVrefine2DISCOVARplusDovetail_12457:HG2_Ill_manta_2496:HG2_Ill_scalpel_8448:HG2_PB_SVrefine2Falcon1plusDovetail_11343:HG2_PB_SVrefine2Falcon2Bionano_4226:HG2_PB_SVrefine2PB10Xhap12_6317:HG2_PB_SVrefine2PBcRplusDovetail_10540:HG3_10X_allpass_1753:HG3_Ill_GATKHCSBGrefine_5886:HG3_Ill_manta_2045:HG3_Ill_scalpel_8565:HG3_PB_SVrefine2Falcon1Dovetail_5281:HG3_PB_SVrefine2PBcRDovetail_3924:HG4_10X_allpass_1710:HG4_Ill_GATKHCSBGrefine_6060:HG4_Ill_MetaSV_5103:HG4_Ill_SVrefine2DISCOVARDovetail_6332:HG4_Ill_manta_2150:HG4_PB_SVrefine2Falcon1Dovetail_5274;NumExactMatchSVs=21;ClusterMaxShiftDist=0.260355;ClusterMaxSizeDiff=0.260355;ClusterMaxEditDist=0.260355;PBcalls=15;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=11181;DistForward=52959;DistMin=11181;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=7:141113864-141114199;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:./.:0:0:0:0:./.:0:0:0:0:1/1:0:39:./.:2:11:.:.:.
chr7	141491710	HG2_PB_SVrefine2Falcon1plusDovetail_11345	CAAGAGATCAAGACCAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGGGACTCCGTCTCAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_8665:HG2_PB_assemblyticsfalcon_25554:HG4_Ill_Krunchall_12574:HG2_PB_pbsv_8653:HG2_Ill_Krunchall_12270:HG2_PB_HySA_15840:HG3_Ill_MetaSV_5055:HG2_Ill_tnscope_1011:HG4_Ill_scalpel_8227:HG4_Ill_MetaSV_5104:HG4_Ill_GATKHCSBGrefine_6061:HG4_10X_allpass_1711:HG3_PB_pbsv_8429:HG3_Ill_GATKHCSBGrefine_5887:HG3_10X_allpass_1754:HG2_PB_SVrefine2PB10Xhap12_6319:HG2_PB_SVrefine2Falcon2Bionano_4228:HG2_PB_SVrefine2Falcon1plusDovetail_11345:HG2_Ill_scalpel_8449:HG2_Ill_SpiralSDKrefine_16350:HG2_Ill_SVrefine2DISCOVARplusDovetail_12461:HG2_Ill_MetaSV_4878:HG2_Ill_GATKHCSBGrefine_5973:HG2_10X_SVrefine210Xhap12_6198;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6198:HG2_Ill_GATKHCSBGrefine_5973:HG2_Ill_MetaSV_4878:HG2_Ill_SVrefine2DISCOVARplusDovetail_12461:HG2_Ill_SpiralSDKrefine_16350:HG2_Ill_scalpel_8449:HG2_PB_SVrefine2Falcon1plusDovetail_11345:HG2_PB_SVrefine2Falcon2Bionano_4228:HG2_PB_SVrefine2PB10Xhap12_6319:HG3_10X_allpass_1754:HG3_Ill_GATKHCSBGrefine_5887:HG3_PB_pbsv_8429:HG4_10X_allpass_1711:HG4_Ill_GATKHCSBGrefine_6061:HG4_Ill_MetaSV_5104:HG4_Ill_scalpel_8227;NumExactMatchSVs=16;ClusterMaxShiftDist=0.160221;ClusterMaxSizeDiff=0.160221;ClusterMaxEditDist=0.160221;PBcalls=8;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-188;DistBack=10134;DistForward=-176;DistMin=-176;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:141491711-141491913;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3803.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:29:0|1:25:1:1:27:./.:0:0:0:0:0/1:23:20:./.:.:.:.:.:.
chr7	144382749	HG2_10X_allpass_1467	TTCACATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATG	T	20	PASS	ClusterIDs=HG4_PB_HySA_12812:HG3_PB_HySA_13201:HG2_PB_assemblyticsfalcon_25567:HG2_PB_assemblyticsPBcR_24784:HG3_PB_assemblyticsfalcon_25404:HG4_Ill_Krunchall_12590:HG3_Ill_Spiral_9362:HG4_PB_pbsv_8676:HG4_PB_assemblyticsfalcon_24983:HG4_PB_SVrefine2PBcRDovetail_4312:HG4_PB_SVrefine2Falcon1Dovetail_5285:HG4_Ill_svaba_11168:HG4_Ill_scalpel_8239:HG4_Ill_SVrefine2DISCOVARDovetail_6344:HG4_Ill_GATKHC_14316:HG4_Ill_GATKHCSBGrefine_6076:HG4_Ill_250bpfermikitraw_11908:HG4_Ill_150bpfermikitraw_11433:HG4_10X_allpass_1715:HG3_PB_pbsv_8442:HG3_PB_SVrefine2PBcRDovetail_3934:HG3_PB_SVrefine2Falcon1Dovetail_5291:HG3_Ill_svaba_11156:HG3_Ill_scalpel_8574:HG3_Ill_SVrefine2DISCOVARDovetail_6519:HG3_Ill_MetaSV_5062:HG3_Ill_GATKHC_14247:HG3_Ill_GATKHCSBGrefine_5897:HG2_PB_pbsv_8664:HG2_PB_SVrefine2PBcRplusDovetail_10552:HG2_PB_SVrefine2PB10Xhap12_6331:HG2_PB_SVrefine2Falcon2Bionano_4234:HG2_PB_SVrefine2Falcon1plusDovetail_11352:HG2_Ill_svaba_11050:HG2_Ill_scalpel_8461:HG2_Ill_manta_2499:HG2_Ill_SVrefine2DISCOVARplusDovetail_12473:HG2_Ill_MetaSV_4884:HG2_Ill_GATKHCSBGrefine_5981:HG2_Ill_250bpfermikitraw_11949:HG2_Ill_150bpfermikitraw_11248:HG2_10X_allpass_1467:HG2_10X_SVrefine210Xhap12_6213:HG4_Ill_MetaSV_5108:HG2_PB_HySA_15851:HG2_Ill_breakscan11_1242;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6213:HG2_10X_allpass_1467:HG2_Ill_150bpfermikitraw_11248:HG2_Ill_250bpfermikitraw_11949:HG2_Ill_GATKHCSBGrefine_5981:HG2_Ill_MetaSV_4884:HG2_Ill_SVrefine2DISCOVARplusDovetail_12473:HG2_Ill_manta_2499:HG2_Ill_scalpel_8461:HG2_Ill_svaba_11050:HG2_PB_SVrefine2Falcon1plusDovetail_11352:HG2_PB_SVrefine2Falcon2Bionano_4234:HG2_PB_SVrefine2PB10Xhap12_6331:HG2_PB_SVrefine2PBcRplusDovetail_10552:HG2_PB_pbsv_8664:HG3_Ill_GATKHCSBGrefine_5897:HG3_Ill_GATKHC_14247:HG3_Ill_MetaSV_5062:HG3_Ill_SVrefine2DISCOVARDovetail_6519:HG3_Ill_scalpel_8574:HG3_Ill_svaba_11156:HG3_PB_SVrefine2Falcon1Dovetail_5291:HG3_PB_SVrefine2PBcRDovetail_3934:HG3_PB_pbsv_8442:HG4_10X_allpass_1715:HG4_Ill_150bpfermikitraw_11433:HG4_Ill_250bpfermikitraw_11908:HG4_Ill_GATKHCSBGrefine_6076:HG4_Ill_GATKHC_14316:HG4_Ill_SVrefine2DISCOVARDovetail_6344:HG4_Ill_scalpel_8239:HG4_Ill_svaba_11168:HG4_PB_SVrefine2Falcon1Dovetail_5285:HG4_PB_SVrefine2PBcRDovetail_4312:HG4_PB_assemblyticsfalcon_24983:HG4_PB_pbsv_8676;NumExactMatchSVs=36;ClusterMaxShiftDist=0.209459;ClusterMaxSizeDiff=0.209459;ClusterMaxEditDist=0.209459;PBcalls=18;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=12;Illexactcalls=21;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-148;DistBack=5874;DistForward=31026;DistMin=5874;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=7:144382750-144382908;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3804.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:1/1:0:10:0:8:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr7	145469555	HG4_Ill_150bpfermikitraw_11442	TGCCAAATTTATTTCTTATTTAATTGCATTTTACTGAGTATGACCTAATAATATTGATGATTTGACATTGTA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_8683:HG4_Ill_GATKHC_14328:HG4_Ill_GATKHCSBGrefine_6087:HG2_Ill_GATKHC_14291:HG2_Ill_GATKHCSBGrefine_5989:HG4_Ill_Cortex_3540:HG2_Ill_Cortex_8593:HG4_Ill_manta_2152:HG2_PB_PB10Xdip_26683:HG2_Ill_manta_2505:HG4_Ill_Spiral_722:HG2_Ill_Spiral_618:HG4_10X_allpass_1717:HG4_Ill_svaba_11185:HG4_Ill_Krunchall_12602:HG4_Ill_250bpfermikitraw_11919:HG4_Ill_150bpfermikitraw_11442:HG2_PB_pbsv_8672:HG2_Ill_svaba_11064:HG2_Ill_Krunchall_12300:HG2_Ill_250bpfermikitraw_11961:HG2_Ill_150bpfermikitraw_11258:HG2_Ill_SpiralSDKrefine_16369;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11258:HG2_Ill_250bpfermikitraw_11961:HG2_Ill_Krunchall_12300:HG2_Ill_svaba_11064:HG2_PB_pbsv_8672:HG4_Ill_150bpfermikitraw_11442:HG4_Ill_250bpfermikitraw_11919:HG4_Ill_Krunchall_12602:HG4_Ill_svaba_11185;NumExactMatchSVs=9;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.111111;PBcalls=3;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-71;DistBack=19890;DistForward=-27;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:145469554-145469627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3805.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:37:0|1:38:6:2:22:./.:0:0:0:0:0/1:29:19:./.:.:.:.:.:.
chr7	146883956	HG3_Ill_Cortex_3561	ACTTGATCTTTTCGGGCTGACCAGTAGGTCTTAAACTGTAGTGCATATTGTTATCACCTGGCAGACTTGTTAAACTGAAGGTTGCTGAGCCCCATTCTCAAAATTTCAGACTCAATAAGAATGAGTGGAGCCTAAACATTTCCATTCTAACAAATGCTCAGGTGGAAATCACTTTGAAAAGCAAAGCTTTAGGGCTGGCATATAAGGAGGATTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6221:HG2_PB_pbsv_8677:HG2_Ill_Krunchall_12305:HG4_PB_assemblyticsfalcon_25000:HG2_PB_assemblyticsPBcR_24806:HG4_PB_HySA_12828:HG2_PB_HySA_15876:HG2_Ill_Spiral_619:HG4_Ill_MetaSV_5113:HG4_PB_pbsv_8688:HG4_PB_SVrefine2PBcRDovetail_4317:HG4_PB_SVrefine2Falcon1Dovetail_5290:HG4_Ill_svaba_11192:HG4_Ill_scalpel_8252:HG4_Ill_manta_2154:HG4_Ill_SVrefine2DISCOVARDovetail_6353:HG4_Ill_GATKHCSBGrefine_6090:HG4_Ill_Cortex_3542:HG4_10X_allpass_1718:HG3_Ill_Cortex_3561:HG2_PB_SVrefine2PBcRplusDovetail_10560:HG2_PB_SVrefine2PB10Xhap12_6342:HG2_PB_SVrefine2Falcon2Bionano_4240:HG2_Ill_svaba_11071:HG2_Ill_scalpel_8468:HG2_Ill_breakscan11_1243:HG2_Ill_SpiralSDKrefine_16377:HG2_Ill_MetaSV_4887:HG2_Ill_GATKHCSBGrefine_5992:HG2_Ill_Cortex_8600;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6221:HG4_PB_pbsv_8688:HG4_PB_SVrefine2PBcRDovetail_4317:HG4_PB_SVrefine2Falcon1Dovetail_5290:HG4_Ill_svaba_11192:HG4_Ill_scalpel_8252:HG4_Ill_manta_2154:HG4_Ill_SVrefine2DISCOVARDovetail_6353:HG4_Ill_GATKHCSBGrefine_6090:HG4_Ill_Cortex_3542:HG4_10X_allpass_1718:HG3_Ill_Cortex_3561:HG2_PB_SVrefine2PBcRplusDovetail_10560:HG2_PB_SVrefine2PB10Xhap12_6342:HG2_PB_SVrefine2Falcon2Bionano_4240:HG2_Ill_svaba_11071:HG2_Ill_scalpel_8468:HG2_Ill_breakscan11_1243:HG2_Ill_SpiralSDKrefine_16377:HG2_Ill_MetaSV_4887:HG2_Ill_GATKHCSBGrefine_5992:HG2_Ill_Cortex_8600;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0234192;ClusterMaxSizeDiff=0.0234192;ClusterMaxEditDist=0.0234192;PBcalls=11;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=1;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-213;DistBack=10161;DistForward=47290;DistMin=10161;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=7:146883957-146884172;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3806.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:42:./.:9:15:10:4:./.:0:0:0:0:0/1:40:16:./.:.:.:.:.:.
chr7	147272280	HG2_Ill_GATKHCSBGrefine_5995	GTGTGTGTGTGTGTGTATTCCCTAGCTTTAGGAGTATGCATATGTGTGTGTT	G	20	PASS	ClusterIDs=HG3_PB_HySA_13222:HG2_PB_assemblyticsfalcon_25591:HG3_PB_assemblyticsfalcon_25420:HG2_PB_assemblyticsPBcR_24810:HG3_PB_pbsv_8454:HG4_Ill_scalpel_8254:HG4_Ill_GATKHC_14341:HG4_Ill_150bpfermikitraw_11452:HG3_Ill_svaba_11188:HG3_Ill_scalpel_8593:HG3_Ill_GATKHC_14274:HG3_Ill_GATKHCSBGrefine_5908:HG3_Ill_250bpfermikitraw_11640:HG2_PB_pbsv_8680:HG2_Ill_scalpel_8473:HG2_Ill_GATKHC_14304:HG2_Ill_GATKHCSBGrefine_5995:HG2_Ill_150bpfermikitraw_11267;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11267:HG2_Ill_GATKHCSBGrefine_5995:HG2_Ill_GATKHC_14304:HG2_Ill_scalpel_8473:HG2_PB_pbsv_8680:HG3_Ill_250bpfermikitraw_11640:HG3_Ill_GATKHCSBGrefine_5908:HG3_Ill_GATKHC_14274:HG3_Ill_scalpel_8593:HG3_Ill_svaba_11188:HG4_Ill_150bpfermikitraw_11452:HG4_Ill_GATKHC_14341:HG4_Ill_scalpel_8254;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0970874;ClusterMaxSizeDiff=0.0970874;ClusterMaxEditDist=0.15534;PBcalls=6;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=16462;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:147272279-147272347;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:35:0|1:29:1:2:38:./.:0:0:0:0:0/1:6:4:./.:.:.:.:.:.
chr7	147472376	HG2_Ill_GATKHC_14305	AATATATATATTTATATATATTTATAAATATATATATATTTATATATATTTATAAATATATATATTTATATATATTTATAAAT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11359:HG2_PB_pbsv_8681:HG2_PB_HySA_15880:HG3_Ill_Krunchall_12002:HG3_Ill_GATKHC_14275:HG3_Ill_GATKHCSBGrefine_5909:HG3_Ill_250bpfermikitraw_11641:HG3_Ill_150bpfermikitraw_11339:HG2_Ill_SpiralSDKrefine_16380:HG2_Ill_Krunchall_12311:HG2_Ill_GATKHC_14305:HG2_Ill_GATKHCSBGrefine_5996:HG2_Ill_250bpfermikitraw_11971:HG3_PB_pbsv_8455:HG3_PB_SVrefine2Falcon1Dovetail_5297:HG3_Ill_SVrefine2DISCOVARDovetail_6527:HG2_PB_SVrefine2Falcon2Bionano_4241;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11971:HG2_Ill_GATKHCSBGrefine_5996:HG2_Ill_GATKHC_14305:HG2_Ill_Krunchall_12311:HG2_Ill_SpiralSDKrefine_16380:HG3_Ill_150bpfermikitraw_11339:HG3_Ill_250bpfermikitraw_11641:HG3_Ill_GATKHCSBGrefine_5909:HG3_Ill_GATKHC_14275:HG3_Ill_Krunchall_12002;NumExactMatchSVs=10;ClusterMaxShiftDist=0.155844;ClusterMaxSizeDiff=0.155844;ClusterMaxEditDist=0.251656;PBcalls=6;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-82;DistBack=-1;DistForward=-57;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=116;REFWIDENED=7:147472323-147472520;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3808.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:26:0|1:37:1:3:30:./.:0:0:0:0:0/1:28:17:./.:.:.:.:.:.
chr7	148072863	HG3_Ill_SVrefine2DISCOVARDovetail_6533	GATCACGAGGTCAGGAGTTCAAGACCAACCTGGCCAAGATGGTGAAACCCCCTCTCTACTAAAAATACAAAAAAAAAAAAATTAGCCAGACATGGTGGCGGGCGCCTGTAATCTCAGCTATTCGGGAGGCTGATGCAGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGTAACAGAGCAAGACTCCATCTCAAAAAAAAAAAGAAAAAAAGAAACGTGAGTGACAATTTCAACCTATTTAGTATCCCCAAAAGCTCAGGAGCTGTGATAAATTGATACAAATAAAAATGTAATACTTCATCTTTTTGCAAAATAGTGCAGTGGGCTCTATGAAGACATTTCTTTTTATTGTTGACTCTGGAAAGAAAAAATCCAGTTTTGTGTTATCAGTCCTTAGAAAAAGATTTATGAGTTAAAATGCAGCAGAGGCCAGGTGCAGTGGCTCCCATCTATAACGCCAGCACTTTGGGAGGCTGAGGGGGATAGGATTGCTTGAAGCCAGGAGTTCGAGACCAGCCTGGGCAACATAATGAGACCCTGTATCTACAGAAAATTTTTAAAAACAAGCCAGTCATGGTGGTGTGCGCCTGTAGTCCCAGGTACTTAGGAGGCTAAGGTGAAAGGATCACTTGAGCCCAGGGGTTCAAGGGTACAGCGAGGCCTATGATCACACCGCTGCATTCCTGCCTGGCTGACAGTGAGACCCTGTCTCTAAAAATAATTAAAATTCAAAATGTGGTAGAGACACTAGAAGGAAAAATGATTCTGCTTCTCCCAGCATTCTGCCTCTGCATAATTGAGTTAGTGCATTTCATAGGTCAAGAACTATTTAAATTACACCTGCATATTTTAGTCCTGCATATTTCTTCATAAGAGAGAAAAGCATCTAATAAATACAATGAAATTTCATTCATGTCTTTATTTAAGGGATGAATAAAATGTCACAGTACCTAATCGTATACATCAATTATGGATCCAGATTTAATTCTGGCTGTGCCTCTTTGGAAAGGCAGCTGATGAGCAAGACATCACTGATCAAAAACTGCATTCTGTTAGAGCAGGAGCTGACAGGGAACCTAGATGCCAGCATTTCCATGCCCTGCCTGATGTTTACCATTTGATCACGTTCGAACTGAGGAATGAGGCTTATCGGATTTTATGTTGCTTTTTTTAGATGAATGCTCTTGGCTTTTTGTTGTTGTTATGGTTACTTCCCATTGATTTATTCCACTAACCATTTAGACTCCCGTTCATTCACCTACGGCCAAATGGGACTAGAATGGAAAAACGGAATCCTACCCGATCAATGCAAATTCTATTTCTCTCTCTCCAAGAGGCCCAGATGACCAGCCCTGACACTGGGAGCCACTGGGAGCTTCAGGTGCTGGCCCAGCAGTGCCTGGCCATGTTTTCAAGTGTACATCAGGTGACCACTCACCTGTTGTACTTCAGTCTGATTTTCCAAGGAGTATTTAAAACCACCCAGGCAGTGATTTCAAACCGACTTTCTACTTATTCCACAAGGTACCGTCGAACCACTGTTCTACGTGTGAGGCCTGTGGAGGGTTTATACAGCAATGAGTGTTCAGTGTTAAGTCCTGCCTTCCTTCATAGAAGAGAAATTTATCAGTTCCTCTGGGTGTCAGTTTTAGAGCAATACAACAACGTTTTGAAAGACAAATCCATTTTTAATGAGACGGACAGATTTTCAGGTAATAGTACTGCTAGAAATAACATATAATGATCTACTGGTTCTGAATACACTGCTGAATTCCTGAATACGCTGAAGACCTCCCCCTCCTCTTTCCTGGTTATGTTCTGCACCTGTTTACACTATGAAGCTGAAAAACAAACTTTGACTATAGCTAACTATGATTGTTCTAATTTCCATAGTACTTGATCCCCTCCCACACACCAAACTATGAATGACAGACTGCTGAATAGATGGTTTCAGTCATAGACCGTCCCTGACTTATGGTTCCACTTAGAAGTTTTCAACTTTACCATGGTTCAAAAGTGATATGCGTTCAGTAGAAACCGTACTTTGAATACCCATACAACCATTCTGTTTTCCACTTTCAACACTTTATTATAAAATAGGTGTGTTAGATGACTTTACTGAACTGTAGACTAATGTAAGTGTTCTGAGTATGTTTAAGGTAGGCTGGGCTATGCTATGATGTTCAGTAGGTTACGTGTATTTAATGCATTTTTGATTTACAATATTCCCACCTTACGATGGGTGTATGGGGAGGTAACCCCATTATACGTTGAAAAGCATCTGTATATTCATTCCTACAGTCACTGGTGATTACTTTGTCCAAGGCATTATTTTGGGGGAACACAAAGAGAAGTGACATTTAGTCCCAGCTGTCAAGAAAACTTTAATTCTAGGAAAGGCACAGTTGCGGGCCTCTGGCCCATCCGAAGAGAGCAGGAACACACCTGGTCCAGTTAGGTAGAGCCGGGAGCAGAATCCAGGAGGAAGCCCCACTCAGCGGGGGTCTCTGGTGTTCTAAAGTGATGGATAGTGACTGGTACTAAGTGTGAGGGGAGAGGGTGGATTACACCTGAATAGTACAGAGGCTCTAAGGCAGAACATCCAGGGACTTAGAGAGACGTCAAACTCCTCCACAACAATGTTCCCCAAACAAGAGTCATTTGAGGACCAATGTCACGATTTTTGCCATTTCTGATGACATTTTTACCATTTCTAGTGGCCTCCTTTACTGTTGTTTACTTAACATTTTCCTTTAAATGGACTCACTATTTTTACTTAAATAAATTTATGTTAAAAAGTTTATGTTAAAGAGAAATTTTGCAATACTACCATGAAATGAAATGCCAGTACCGCTTGCTGTCACGATACGGTGGTGCTAAAAATACGTAATATAAAAATATAATGAAACTCAGCACTGTTGCCCACCGAAGCATCCAGGTCTGAGGTCTGACCTCTCTTTGTTAAAAAGGGAAAATAGCAAGTATTGGCACCATAATAAAGATAGTCCAGCCCCACACTGAGCCGGCCTGAGACTCTGAGAAATTGAAAGGGAATCGGGGAAGGAATAAGACTGGATGTTATTTAGCTCCCAGTCTGTGAATTACCTAAAGACCCCCAGTGCCACCAGTGCGACATACTTCACCCCAGAACAGAGGGAAGGAACAGAATGGTAGGCAGTGCTTTGGGGCCAGTTGTACTACAGTCTCTGCAGAGCAACCATATGCTGTGTCAGGGCTGGAACCAGGTTTGGCCATCTGTGTTGACCCCACAGATTCTATGAAGGGTGACTTCCACAATCCCTAGCACACTGGGGAGCACACAGTACATACTTATCAAAAGTCTTAAATTAAGTCTCACTGATGCCCTAAAATCTTCTGCCTGTTTCATAAAAAGTAGAAAATGAAGTTGACAGTGATTCTTTGT	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1244:HG2_10X_allpass_1470:HG3_10X_allpass_1761:HG3_PB_pbsv_8459:HG4_10X_allpass_1721:HG3_Ill_Krunchall_12006:HG2_Ill_Krunchall_12318:HG3_PB_assemblyticsfalcon_25425:HG2_PB_assemblyticsfalcon_25604:HG2_PB_assemblyticsPBcR_24820:HG2_Ill_tnscope_1016:HG4_PB_pbsv_8694:HG4_PB_SVrefine2PBcRDovetail_4322:HG4_PB_SVrefine2Falcon1Dovetail_5293:HG4_Ill_SVrefine2DISCOVARDovetail_6360:HG4_Ill_MetaSV_5116:HG3_PB_SVrefine2PBcRDovetail_3945:HG3_PB_SVrefine2Falcon1Dovetail_5300:HG3_Ill_SVrefine2DISCOVARDovetail_6533:HG3_Ill_MetaSV_5067:HG3_Ill_GATKHCSBGrefine_5913:HG2_PB_pbsv_8685:HG2_PB_SVrefine2PBcRplusDovetail_10565:HG2_PB_SVrefine2PB10Xhap12_6347:HG2_PB_SVrefine2Falcon2Bionano_4244:HG2_PB_SVrefine2Falcon1plusDovetail_11364:HG2_Ill_SpiralSDKrefine_16386:HG2_Ill_SVrefine2DISCOVARplusDovetail_12483:HG2_Ill_MetaSV_4889:HG2_Ill_GATKHCSBGrefine_6001:HG2_10X_SVrefine210Xhap12_6225;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6225:HG2_Ill_GATKHCSBGrefine_6001:HG2_Ill_MetaSV_4889:HG2_Ill_SVrefine2DISCOVARplusDovetail_12483:HG2_Ill_SpiralSDKrefine_16386:HG2_PB_SVrefine2Falcon1plusDovetail_11364:HG2_PB_SVrefine2Falcon2Bionano_4244:HG2_PB_SVrefine2PB10Xhap12_6347:HG2_PB_SVrefine2PBcRplusDovetail_10565:HG2_PB_pbsv_8685:HG3_Ill_GATKHCSBGrefine_5913:HG3_Ill_MetaSV_5067:HG3_Ill_SVrefine2DISCOVARDovetail_6533:HG3_PB_SVrefine2Falcon1Dovetail_5300:HG3_PB_SVrefine2PBcRDovetail_3945:HG4_Ill_MetaSV_5116:HG4_Ill_SVrefine2DISCOVARDovetail_6360:HG4_PB_SVrefine2Falcon1Dovetail_5293:HG4_PB_SVrefine2PBcRDovetail_4322:HG4_PB_pbsv_8694;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00289268;ClusterMaxSizeDiff=0.00289268;ClusterMaxEditDist=0.00289268;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-3460;DistBack=9610;DistForward=-3458;DistMin=-3458;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=7:148072864-148076326;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:98:1/1:0:24:0:27:./.:0:0:0:0:1/1:0:22:1/1:3:245:3598:.:.
chr7	148438627	HG2_Ill_SVrefine2DISCOVARplusDovetail_12484	TTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAACCGCAGGTGTGCATCACCATGCCCAGCTAATTTTGGTGTTTGTAGTAGAGACAGGGTTTCATCACGTTGGCCAGGCTGGTCTCGAGCTCCTGGCC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12484:HG2_PB_HySA_15893:HG2_PB_SVrefine2Falcon1plusDovetail_11367:HG2_PB_assemblyticsfalcon_25607:HG2_PB_pbsv_8689:HG3_PB_pbsv_8464:HG3_Ill_GATKHCSBGrefine_5915:HG3_10X_allpass_1762:HG3_PB_SVrefine2PBcRDovetail_3948:HG3_PB_SVrefine2Falcon1Dovetail_5304:HG3_Ill_SVrefine2DISCOVARDovetail_6537;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12484:HG3_PB_SVrefine2PBcRDovetail_3948:HG3_PB_SVrefine2Falcon1Dovetail_5304:HG3_Ill_SVrefine2DISCOVARDovetail_6537;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0294118;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0367647;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-135;DistBack=48285;DistForward=-130;DistMin=-130;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=163;REFWIDENED=7:148438628-148438925;PctSeqSimilarity=0.9804;PctSizeSimilarity=1;PctRecOverlap=0.6324;SizeDiff=0;StartDistance=-50;EndDistance=-50;GTMatch=0;TruScore=87;MatchId=3810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:./.:19:17:8:21:./.:0:0:0:0:0/1:33:9:./.:.:.:.:.:.
chr7	148563594	HG2_Ill_250bpfermikitraw_11979	GTATATACATATATATGTGTATATACATATATATACGTATATACATATATATACA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_8690:HG3_PB_assemblyticsfalcon_25429:HG2_PB_assemblyticsfalcon_25608:HG4_PB_pbsv_8698:HG4_Ill_svaba_11204:HG4_Ill_manta_2160:HG4_Ill_Krunchall_12620:HG4_Ill_GATKHC_14355:HG4_Ill_GATKHCSBGrefine_6095:HG4_Ill_250bpfermikitraw_11939:HG4_Ill_150bpfermikitraw_11463:HG4_10X_allpass_1722:HG2_Ill_svaba_11084:HG2_Ill_manta_2509:HG2_Ill_Krunchall_12320:HG2_Ill_GATKHC_14320:HG2_Ill_GATKHCSBGrefine_6003:HG2_Ill_250bpfermikitraw_11979:HG2_Ill_150bpfermikitraw_11275;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11275:HG2_Ill_250bpfermikitraw_11979:HG2_Ill_GATKHCSBGrefine_6003:HG2_Ill_GATKHC_14320:HG2_Ill_Krunchall_12320:HG2_Ill_manta_2509:HG2_Ill_svaba_11084:HG4_10X_allpass_1722:HG4_Ill_150bpfermikitraw_11463:HG4_Ill_250bpfermikitraw_11939:HG4_Ill_GATKHCSBGrefine_6095:HG4_Ill_GATKHC_14355:HG4_Ill_Krunchall_12620:HG4_Ill_manta_2160:HG4_Ill_svaba_11204;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0185185;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.0555556;PBcalls=4;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-54;DistBack=-26;DistForward=24;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=7:148563593-148563664;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3811.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:23:0|1:20:3:1:18:./.:0:0:0:0:0/1:29:27:./.:.:.:.:.:.
chr7	148818187	HG4_Ill_SVrefine2DISCOVARDovetail_6365	TTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_8692:HG4_Ill_GATKHCSBGrefine_6098:HG3_Ill_GATKHCSBGrefine_5917:HG2_Ill_GATKHCSBGrefine_6006:HG4_PB_SVrefine2PBcRDovetail_4324:HG4_PB_SVrefine2Falcon1Dovetail_5299:HG4_Ill_SVrefine2DISCOVARDovetail_6365:HG3_PB_SVrefine2PBcRDovetail_3950:HG3_PB_SVrefine2Falcon1Dovetail_5306:HG3_Ill_SVrefine2DISCOVARDovetail_6541:HG2_PB_SVrefine2PBcRplusDovetail_10569:HG2_PB_SVrefine2PB10Xhap12_6354:HG2_PB_SVrefine2Falcon2Bionano_4248:HG2_PB_SVrefine2Falcon1plusDovetail_11370:HG2_Ill_SVrefine2DISCOVARplusDovetail_12490:HG2_10X_SVrefine210Xhap12_6234:HG4_Ill_manta_2161:HG3_Ill_manta_2054:HG2_Ill_manta_2510:HG2_Ill_SVrefine2DISCOVARplusDovetail_12489:HG2_Ill_breakscan11_1245:HG4_Ill_scalpel_8262:HG4_10X_allpass_1723:HG3_10X_allpass_1763:HG4_PB_HySA_12838:HG3_PB_HySA_13236:HG2_PB_HySA_15899:HG3_Ill_MetaSV_5069:HG2_Ill_MetaSV_4892:HG4_Ill_MetaSV_5119:HG3_PB_pbsv_8466:HG2_Ill_tnscope_1017:HG4_PB_pbsv_8701;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6234:HG2_Ill_SVrefine2DISCOVARplusDovetail_12490:HG2_PB_SVrefine2Falcon1plusDovetail_11370:HG2_PB_SVrefine2Falcon2Bionano_4248:HG2_PB_SVrefine2PB10Xhap12_6354:HG2_PB_SVrefine2PBcRplusDovetail_10569:HG3_Ill_SVrefine2DISCOVARDovetail_6541:HG3_PB_SVrefine2Falcon1Dovetail_5306:HG3_PB_SVrefine2PBcRDovetail_3950:HG4_Ill_SVrefine2DISCOVARDovetail_6365:HG4_PB_SVrefine2Falcon1Dovetail_5299:HG4_PB_SVrefine2PBcRDovetail_4324;NumExactMatchSVs=12;ClusterMaxShiftDist=0.115321;ClusterMaxSizeDiff=0.115321;ClusterMaxEditDist=0.115321;PBcalls=14;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-299;DistBack=-21;DistForward=-14;DistMin=-21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=169;REFWIDENED=7:148818188-148818655;PctSeqSimilarity=0.9772;PctSizeSimilarity=0.9553;PctRecOverlap=0.9554;SizeDiff=-14;StartDistance=14;EndDistance=0;GTMatch=0;TruScore=96;MatchId=3812.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:37:./.:0:0:0:0:./.:0:0:0:0:./.:3:33:0/1:4:5:.:.:.
chr7	149562923	HG3_10X_allpass_1764	GCTTCCCATTCCCAGGGTAGATGCTGGCATCTGAGCACCTGAGTACCCTTCCTATTCCCAGGGTAGAAGCTGCTGTCTGAGTACC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6239:HG4_PB_assemblyticsfalcon_25024:HG2_PB_HySA_15905:HG3_PB_pbsv_8469:HG2_PB_pbsv_8694:HG3_Ill_Krunchall_12015:HG3_Ill_GATKHCSBGrefine_5920:HG3_Ill_250bpfermikitraw_11652:HG3_Ill_150bpfermikitraw_11349:HG3_10X_allpass_1764:HG2_PB_assemblyticsPBcR_24835:HG2_PB_SVrefine2PB10Xhap12_6355:HG2_Ill_GATKHCSBGrefine_6008:HG2_Ill_250bpfermikitraw_11984;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6239:HG3_Ill_Krunchall_12015:HG3_Ill_GATKHCSBGrefine_5920:HG3_Ill_250bpfermikitraw_11652:HG3_Ill_150bpfermikitraw_11349:HG3_10X_allpass_1764:HG2_PB_assemblyticsPBcR_24835:HG2_PB_SVrefine2PB10Xhap12_6355:HG2_Ill_GATKHCSBGrefine_6008:HG2_Ill_250bpfermikitraw_11984;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0350877;PBcalls=6;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-84;DistBack=6763;DistForward=12913;DistMin=6763;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=123;REFWIDENED=7:149562924-149563130;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3813.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:24:0|1:26:2:1:26:./.:0:0:0:0:0/1:20:12:./.:.:.:.:.:.
chr7	149575928	HG2_PB_pbsv_8695	CTTTCCCACACCCAGGGCAGGCCTCGGTCATATTATTTTGGATGCGGCCAACCCAGCAGATGGCAGGGCCTGTGTTCCCAGGGTGACGAAGGGCCCAGGGAGCCATCCACACTCCGGCAGGCACATGGGGTTGGTATGGCACTTCTGGGTTTGGTTTTGATTTCA	C	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_26713:HG3_Ill_GATKHCSBGrefine_5921:HG2_Ill_GATKHCSBGrefine_6009:HG2_PB_SVrefine2Falcon1plusDovetail_11371:HG3_PB_SVrefine2PBcRDovetail_3952:HG3_Ill_manta_2055:HG3_Ill_SVrefine2DISCOVARDovetail_6542:HG3_CG_vcfBeta_4844:HG2_Ill_manta_2511:HG2_10X_SVrefine210Xhap12_6240:HG2_Ill_SpiralSDKrefine_16394:HG3_Ill_Spiral_9395:HG2_PB_assemblyticsfalcon_25617:HG2_PB_SVrefine2PB10Xhap12_6357:HG3_Ill_MetaSV_5071:HG3_PB_HySA_13244:HG2_Ill_MetaSV_4893:HG3_PB_pbsv_8470:HG3_Ill_svaba_11201:HG3_Ill_scalpel_8602:HG3_Ill_250bpfermikitraw_11653:HG3_Ill_150bpfermikitraw_11350:HG3_10X_allpass_1765:HG2_PB_pbsv_8695:HG2_Ill_svaba_11092:HG2_Ill_scalpel_8484;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_scalpel_8484:HG2_Ill_svaba_11092:HG2_PB_pbsv_8695:HG3_10X_allpass_1765:HG3_Ill_150bpfermikitraw_11350:HG3_Ill_250bpfermikitraw_11653:HG3_Ill_scalpel_8602:HG3_Ill_svaba_11201:HG3_PB_pbsv_8470;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0875;ClusterMaxSizeDiff=0.0875;ClusterMaxEditDist=0.0875;PBcalls=8;Illcalls=15;TenXcalls=2;CGcalls=1;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=14;HG4count=0;NumTechs=4;NumTechsExact=3;SVLEN=-164;DistBack=-170;DistForward=28469;DistMin=-170;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2740;REFWIDENED=7:149573192-149585821;PctSeqSimilarity=0.997;PctSizeSimilarity=0.9939;PctRecOverlap=0.994;SizeDiff=-1;StartDistance=0;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=3814.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:18:0|1:26:0:0:18:./.:0:0:0:0:0/1:36:11:./.:.:.:.:.:.
chr7	151013613	HG2_Ill_GATKHC_14345	CAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	C	20	PASS	ClusterIDs=HG2_Ill_manta_2512:HG3_PB_HySA_13272:HG2_PB_HySA_15932:HG4_PB_assemblyticsfalcon_25037:HG3_PB_assemblyticsfalcon_25449:HG3_PB_SVrefine2Falcon1Dovetail_5315:HG4_PB_pbsv_8724:HG4_PB_HySA_12861:HG4_PB_SVrefine2PBcRDovetail_4336:HG3_PB_pbsv_8488:HG4_Ill_Krunchall_12647:HG4_Ill_GATKHCSBGrefine_6104:HG4_Ill_250bpfermikitraw_11966:HG4_Ill_150bpfermikitraw_11486:HG2_PB_SVrefine2PBcRplusDovetail_10577:HG2_PB_SVrefine2Falcon1plusDovetail_11377:HG2_Ill_GATKHC_14345:HG2_Ill_GATKHCSBGrefine_6013:HG2_Ill_250bpfermikitraw_12004:HG2_10X_SVrefine210Xhap12_6248:HG2_PB_pbsv_8710:HG3_Ill_SVrefine2DISCOVARDovetail_6547:HG3_Ill_Krunchall_12037:HG3_Ill_GATKHC_14313:HG3_Ill_GATKHCSBGrefine_5927:HG3_Ill_250bpfermikitraw_11672:HG3_Ill_150bpfermikitraw_11371:HG2_PB_SVrefine2PB10Xhap12_6369:HG2_PB_SVrefine2Falcon2Bionano_4257;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6248:HG2_Ill_250bpfermikitraw_12004:HG2_Ill_GATKHCSBGrefine_6013:HG2_Ill_GATKHC_14345:HG2_PB_SVrefine2Falcon1plusDovetail_11377:HG2_PB_SVrefine2PBcRplusDovetail_10577:HG4_Ill_150bpfermikitraw_11486:HG4_Ill_250bpfermikitraw_11966:HG4_Ill_GATKHCSBGrefine_6104:HG4_Ill_Krunchall_12647:HG4_PB_SVrefine2PBcRDovetail_4336;NumExactMatchSVs=11;ClusterMaxShiftDist=0.26178;ClusterMaxSizeDiff=0.26178;ClusterMaxEditDist=0.26178;PBcalls=14;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-90;DistBack=3740;DistForward=-66;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=66;REFWIDENED=7:151013619-151013769;PctSeqSimilarity=0.9718;PctSizeSimilarity=0.9444;PctRecOverlap=0.9451;SizeDiff=5;StartDistance=0;EndDistance=5;GTMatch=0;TruScore=95;MatchId=3815.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:71:1/1:0:7:2:33:./.:0:0:0:0:0/1:5:28:./.:.:.:.:.:.
chr7	151057981	HG2_Ill_scalpel_8497	TCAAAGTGCTGGTATTACAGGTGTGAGTCGCTGTGTCGGCTTTTTTTTTTTTTTTTTTTTTTTAATTATACAGATGGGGTCTCCCTGTGTTGCTCAGGCTGATCTTGAACTCCTGGACTCATGTGATCCTCCTGCCTTGGCCTCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11378:HG4_Ill_Krunchall_12648:HG3_Ill_Krunchall_12038:HG2_PB_pbsv_8711:HG4_Ill_Spiral_726:HG3_PB_HySA_13273:HG2_PB_HySA_15933:HG2_Ill_Spiral_620:HG3_PB_pbsv_8489:HG4_PB_SVrefine2PBcRDovetail_4337:HG4_Ill_scalpel_8280:HG4_Ill_MetaSV_5127:HG4_Ill_GATKHCSBGrefine_6105:HG4_10X_allpass_1728:HG3_Ill_scalpel_8621:HG3_Ill_manta_2058:HG3_Ill_SVrefine2DISCOVARDovetail_6550:HG3_Ill_MetaSV_5074:HG3_Ill_GATKHC_14314:HG3_Ill_GATKHCSBGrefine_5928:HG3_10X_allpass_1769:HG2_PB_assemblyticsPBcR_24850:HG2_PB_SVrefine2PBcRplusDovetail_10578:HG2_PB_SVrefine2PB10Xhap12_6370:HG2_PB_SVrefine2Falcon2Bionano_4258:HG2_Ill_scalpel_8497:HG2_Ill_manta_2513:HG2_Ill_SpiralSDKrefine_16409:HG2_Ill_MetaSV_4898:HG2_Ill_GATKHCSBGrefine_6014:HG2_10X_allpass_1473:HG2_10X_SVrefine210Xhap12_6249:HG4_PB_pbsv_8725:HG3_PB_SVrefine2Falcon1Dovetail_5316;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6249:HG2_10X_allpass_1473:HG2_Ill_GATKHCSBGrefine_6014:HG2_Ill_MetaSV_4898:HG2_Ill_SpiralSDKrefine_16409:HG2_Ill_manta_2513:HG2_Ill_scalpel_8497:HG2_PB_SVrefine2Falcon2Bionano_4258:HG2_PB_SVrefine2PB10Xhap12_6370:HG2_PB_SVrefine2PBcRplusDovetail_10578:HG2_PB_assemblyticsPBcR_24850:HG3_10X_allpass_1769:HG3_Ill_GATKHCSBGrefine_5928:HG3_Ill_GATKHC_14314:HG3_Ill_MetaSV_5074:HG3_Ill_SVrefine2DISCOVARDovetail_6550:HG3_Ill_manta_2058:HG3_Ill_scalpel_8621:HG4_10X_allpass_1728:HG4_Ill_GATKHCSBGrefine_6105:HG4_Ill_MetaSV_5127:HG4_Ill_scalpel_8280:HG4_PB_SVrefine2PBcRDovetail_4337;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0137931;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.194444;PBcalls=12;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-144;DistBack=12346;DistForward=-120;DistMin=-120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=64;REFWIDENED=7:151057944-151058151;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3816.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:64:1/1:1:20:1:30:./.:0:0:0:0:1/1:0:24:./.:.:.:.:.:.
chr7	152419399	HG2_10X_SVrefine210Xhap12_6260	TGGATCACTACTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTTACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1250:HG3_PB_assemblyticsfalcon_25473:HG4_Ill_Krunchall_12669:HG3_Ill_Krunchall_12055:HG2_Ill_Krunchall_12363:HG3_PB_HySA_13301:HG2_PB_HySA_15979:HG2_Ill_Spiral_622:HG2_PB_pbsv_8729:HG3_Ill_MetaSV_5078:HG2_Ill_MetaSV_4903:HG4_PB_pbsv_8746:HG4_Ill_GATKHCSBGrefine_6117:HG4_10X_allpass_1730:HG3_PB_pbsv_8503:HG3_PB_SVrefine2PBcRDovetail_3956:HG3_Ill_GATKHCSBGrefine_5939:HG2_PB_SVrefine2PBcRplusDovetail_10588:HG2_Ill_scalpel_8511:HG2_Ill_SpiralSDKrefine_16422:HG2_Ill_GATKHCSBGrefine_6028:HG2_10X_SVrefine210Xhap12_6260:HG2_PB_SVrefine2PB10Xhap12_6387;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6260:HG2_Ill_GATKHCSBGrefine_6028:HG2_Ill_SpiralSDKrefine_16422:HG2_Ill_scalpel_8511:HG2_PB_SVrefine2PBcRplusDovetail_10588:HG3_Ill_GATKHCSBGrefine_5939:HG3_PB_SVrefine2PBcRDovetail_3956:HG3_PB_pbsv_8503:HG4_10X_allpass_1730:HG4_Ill_GATKHCSBGrefine_6117:HG4_PB_pbsv_8746;NumExactMatchSVs=11;ClusterMaxShiftDist=0.113452;ClusterMaxSizeDiff=0.113452;ClusterMaxEditDist=0.113452;PBcalls=9;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=-388;DistForward=-251;DistMin=-388;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=63;REFWIDENED=7:152419400-152419778;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3817.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:32:./.:10:5:5:22:./.:0:0:0:0:0/1:15:16:0/1:23:5:.:.:.
chr7	152567945	HG3_PB_SVrefine2Falcon1Dovetail_5327	TGGATCTGGGAGGGTCTCTGCAGGATGATCCAGAGCCGGGGGTCTCTGCAGCAGGATCTGGGAGGGTCTCTGCAGGATGATCCAGAGCCGGGGGTCTCTGCAGCAGGATCTGGGAGGGTCTCTGCAGGATGATCCAGAGCCGGGGGTCTCTGCAGCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6263:HG2_PB_pbsv_8730:HG4_PB_HySA_12894:HG4_PB_pbsv_8747:HG3_PB_pbsv_8504:HG2_PB_HySA_15982:HG4_PB_SVrefine2PBcRDovetail_4349:HG4_PB_SVrefine2Falcon1Dovetail_5308:HG4_Ill_svaba_11256:HG4_Ill_manta_2168:HG4_Ill_SVrefine2DISCOVARDovetail_6367:HG4_Ill_GATKHCSBGrefine_6118:HG4_Ill_250bpfermikitraw_11988:HG4_Ill_150bpfermikitraw_11503:HG4_10X_allpass_1731:HG3_PB_SVrefine2Falcon1Dovetail_5327:HG3_Ill_svaba_11240:HG3_Ill_SVrefine2DISCOVARDovetail_6559:HG3_Ill_GATKHCSBGrefine_5940:HG3_Ill_250bpfermikitraw_11692:HG3_Ill_150bpfermikitraw_11389:HG3_10X_allpass_1772:HG2_PB_SVrefine2PBcRplusDovetail_10589:HG2_PB_SVrefine2PB10Xhap12_6388:HG2_PB_SVrefine2Falcon2Bionano_4265:HG2_PB_SVrefine2Falcon1plusDovetail_11392:HG2_Ill_svaba_11131:HG2_Ill_manta_2518:HG2_Ill_SpiralSDKrefine_16424:HG2_Ill_SVrefine2DISCOVARplusDovetail_12495:HG2_Ill_GATKHCSBGrefine_6029:HG2_Ill_250bpfermikitraw_12025:HG2_Ill_150bpfermikitraw_11315:HG2_10X_allpass_1475;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6263:HG4_PB_SVrefine2PBcRDovetail_4349:HG4_PB_SVrefine2Falcon1Dovetail_5308:HG4_Ill_svaba_11256:HG4_Ill_manta_2168:HG4_Ill_SVrefine2DISCOVARDovetail_6367:HG4_Ill_GATKHCSBGrefine_6118:HG4_Ill_250bpfermikitraw_11988:HG4_Ill_150bpfermikitraw_11503:HG4_10X_allpass_1731:HG3_PB_SVrefine2Falcon1Dovetail_5327:HG3_Ill_svaba_11240:HG3_Ill_SVrefine2DISCOVARDovetail_6559:HG3_Ill_GATKHCSBGrefine_5940:HG3_Ill_250bpfermikitraw_11692:HG3_Ill_150bpfermikitraw_11389:HG3_10X_allpass_1772:HG2_PB_SVrefine2PBcRplusDovetail_10589:HG2_PB_SVrefine2PB10Xhap12_6388:HG2_PB_SVrefine2Falcon2Bionano_4265:HG2_PB_SVrefine2Falcon1plusDovetail_11392:HG2_Ill_svaba_11131:HG2_Ill_manta_2518:HG2_Ill_SpiralSDKrefine_16424:HG2_Ill_SVrefine2DISCOVARplusDovetail_12495:HG2_Ill_GATKHCSBGrefine_6029:HG2_Ill_250bpfermikitraw_12025:HG2_Ill_150bpfermikitraw_11315:HG2_10X_allpass_1475;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0190476;PBcalls=12;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=18;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-156;DistBack=5402;DistForward=-157;DistMin=-157;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=7:152568022-152576529;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3818.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:22:./.:1:8:0:4:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr7	153012033	HG4_Ill_GATKHCSBGrefine_6123	GCCTCCCGGACGGGGCGGCTGGCCGGATGGGGTGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTC	G	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_6038:HG2_PB_assemblyticsfalcon_25672:HG2_PB_assemblyticsPBcR_24888:HG2_PB_pbsv_8736:HG3_PB_pbsv_8510:HG4_PB_pbsv_8754:HG2_PB_HySA_15995:HG4_Ill_GATKHCSBGrefine_6123:HG3_Ill_Krunchall_12061:HG3_Ill_GATKHCSBGrefine_5949;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6038:HG4_Ill_GATKHCSBGrefine_6123:HG3_Ill_Krunchall_12061:HG3_Ill_GATKHCSBGrefine_5949;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.030303;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=24867;DistForward=14353;DistMin=14353;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=294;REFWIDENED=7:153012029-153012388;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3819.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:38:1/1:2:13:0:17:./.:0:0:0:0:./.:0:5:./.:.:.:.:.:.
chr7	153064509	HG3_Ill_150bpfermikitraw_11396	ATGTCACATGGACTTGCCCTGCTTACTGCACTGACTTCATCTCTTAGCGCTC	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11321:HG3_Ill_GATKHC_14347:HG3_Ill_GATKHCSBGrefine_5950:HG2_Ill_GATKHC_14378:HG2_Ill_GATKHCSBGrefine_6039:HG3_Ill_manta_2066:HG2_Ill_manta_2524:HG2_Ill_SpiralSDKrefine_16429:HG3_Ill_Spiral_9425:HG2_Ill_Spiral_624:HG3_PB_pbsv_8511:HG2_PB_pbsv_8738:HG3_PB_assemblyticsfalcon_25481:HG3_Ill_svaba_11244:HG3_Ill_scalpel_8643:HG3_Ill_Krunchall_12062:HG3_Ill_250bpfermikitraw_11697:HG3_Ill_150bpfermikitraw_11396:HG2_Ill_svaba_11136:HG2_Ill_scalpel_8516:HG2_Ill_Krunchall_12374:HG2_Ill_250bpfermikitraw_12031;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11321:HG3_Ill_svaba_11244:HG3_Ill_scalpel_8643:HG3_Ill_Krunchall_12062:HG3_Ill_250bpfermikitraw_11697:HG3_Ill_150bpfermikitraw_11396:HG2_Ill_svaba_11136:HG2_Ill_scalpel_8516:HG2_Ill_Krunchall_12374:HG2_Ill_250bpfermikitraw_12031;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0392157;PBcalls=3;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-51;DistBack=37905;DistForward=83312;DistMin=37905;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:153064508-153064562;PctSeqSimilarity=0.9903;PctSizeSimilarity=0.9804;PctRecOverlap=0.9808;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3820.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:26:1:4:36:./.:0:0:0:0:0/1:24:22:./.:.:.:.:.:.
chr7	153310127	HG2_10X_SVrefine210Xhap12_6270	TAAAACTATAACACTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTATTGTGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGGTGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCACAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAAAGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCACGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_8513:HG3_Ill_Krunchall_12067:HG2_Ill_Krunchall_12378:HG4_Ill_Krunchall_12678:HG3_Ill_Krunchall_12066:HG2_PB_pbsv_8740:HG2_Ill_Krunchall_12377:HG2_10X_allpass_1476:HG3_PB_assemblyticsfalcon_25482:HG2_PB_assemblyticsfalcon_25676:HG2_PB_assemblyticsPBcR_24893:HG4_PB_assemblyticsfalcon_25078:HG2_PB_HySA_15998:HG2_Ill_tnscope_1020:HG4_PB_SVrefine2PBcRDovetail_4355:HG4_PB_SVrefine2Falcon1Dovetail_5315:HG4_Ill_manta_2172:HG4_Ill_SVrefine2DISCOVARDovetail_6372:HG4_Ill_MetaSV_5138:HG4_Ill_GATKHCSBGrefine_6124:HG4_10X_allpass_1733:HG3_PB_SVrefine2Falcon1Dovetail_5333:HG3_Ill_manta_2067:HG3_Ill_SVrefine2DISCOVARDovetail_6564:HG3_Ill_MetaSV_5080:HG3_Ill_GATKHCSBGrefine_5953:HG3_10X_allpass_1773:HG2_PB_SVrefine2PBcRplusDovetail_10597:HG2_PB_SVrefine2PB10Xhap12_6396:HG2_PB_SVrefine2Falcon2Bionano_4272:HG2_Ill_manta_2525:HG2_Ill_SVrefine2DISCOVARplusDovetail_12501:HG2_Ill_MetaSV_4907:HG2_Ill_GATKHCSBGrefine_6041:HG2_10X_SVrefine210Xhap12_6270:HG4_PB_pbsv_8756;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6270:HG2_Ill_GATKHCSBGrefine_6041:HG2_Ill_MetaSV_4907:HG2_Ill_SVrefine2DISCOVARplusDovetail_12501:HG2_Ill_manta_2525:HG2_PB_SVrefine2Falcon2Bionano_4272:HG2_PB_SVrefine2PB10Xhap12_6396:HG2_PB_SVrefine2PBcRplusDovetail_10597:HG3_10X_allpass_1773:HG3_Ill_GATKHCSBGrefine_5953:HG3_Ill_MetaSV_5080:HG3_Ill_SVrefine2DISCOVARDovetail_6564:HG3_Ill_manta_2067:HG3_PB_SVrefine2Falcon1Dovetail_5333:HG4_10X_allpass_1733:HG4_Ill_GATKHCSBGrefine_6124:HG4_Ill_MetaSV_5138:HG4_Ill_SVrefine2DISCOVARDovetail_6372:HG4_Ill_manta_2172:HG4_PB_SVrefine2Falcon1Dovetail_5315:HG4_PB_SVrefine2PBcRDovetail_4355;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0306346;ClusterMaxSizeDiff=0.0306346;ClusterMaxEditDist=0.0306346;PBcalls=14;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-690;DistBack=23646;DistForward=-680;DistMin=-680;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=7:153310128-153310828;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3821.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:1/1:0:21:2:21:./.:0:0:0:0:1/1:0:33:1/1:2:21:738:.:.
chr7	154391841	HG3_PB_pbsv_8522	CCTTTTTTCTTTTCTGAGATGGAGTCTCACTCTGTTGACCAGGCTGGAGTACAGTGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGACTCAGCCTCCTGAGTAGCTGGGATTACAGGCACTTGCCACCGTGCCCGGCTAATTTTTCGTATTTTTTGTAGACATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCGAAAGAGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCCTTTTATGTAATCTCTTATCCTGTCCCAAAGACAATTTTATAAAATAATAATAAGTAGCACTTTTGGGTGATTAATAGGTGCCAGGCACCATGTCAAAAACTTTCTGTCCAGTATCTCCTTTAATCTTCACAAGAAACCTATTGTGGTAACTCTTACACCATTTTATAGATGATGAAACCAAGGCTAAAGGAAATATGATGAAATGTCCAGGGTCACTCGGCTGGGAATTTGGGAAGCCAAGTTGGAAACTCAGATCTACTAATTTTCAAAGCTTGCACTTATTTTAAAGTAATGGCATATTTGGTTTGTTGTCATAGTTTAATCATGAACTGTTTCAAGTGTACAGAAAAGTACAGATGGCATTACTTAAAACCACTTGCAGCCAGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGAGAAACCCCATCTCTACTAAAAATACAAAATTTGCCAGGCGTGGTGGTACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCTGGAGGCGGAGGTTGCGGTGAGCCATTGGACTCCAGCCTGGGCAACAAGAGCGAAACTCCATCTCAAGAAACAAAAACAAAAACAAAAAACCACTCACATCCAGAATGCTCAAATTTAACAAGTGTGATCTGTCTTGTTGAATGCGTCCAGGGTCTTGAAGGTGTGTATGTATGCTGATGCACTTGGATGACCTGTTGTAAAGTATGTCAATTAGGTCAAATTAGTTGATATTTTGTTCCAGTCTTCTATTTAATTACTTTTGCTGTGAATTACTGTGTAAGAAGTATTGAAATCTCTCATTGTATTTGGAGATTTGTCTAGTTCTCTTTTCAAATCTGTCACGTTTTGCTTAGTAAATATTGAAGCTCTCACAGTAAGCACATATACATTTAGGATTTTCTTGTCTTATCATTGAATTGACCTTTTCATCATTATGAAATGTCCCTGGTAGTATTCCTTTGTCTCTGTTAATATTCTGTGTTCTTCAGTCCATTTGTTTGATAATAAACCATTGCAGCTTTCTTTTGATTCATATTTGCCTGGTAGAACTTTTTCTATCCTTTTACTTCTAACCTCTTCATATGTTTACATTTAAAGTATGTTTCTTATAAATAACATGTAGTTAGGTCTTGCTTTTTTTTTCTTTCAGTGAGACAATCTCTATCTTTTAAAAAGAATATTTAGAGAACAGATTAGCAAATTATGGCCCCTGAGCCTAATTTATCTTAGTGCCTATTTTTGTAAATAAAGATTTATTGGAAAACATCCATGAGCATTTGTTAGGTATTGTCCAAGGCTGTTTTTGTACTTCCAAAGTAGTTGCAATACAGACCGTATGGCTTGAAAAACCAAAAGCATTTATTATATGTCCCTTTATGGAAAATATGTGCTGACTCCTATTTTAAATGTTACATTTGATGTAATTGTCAGCATGATTTAATTGAAATCTACCATTTGCTATTAGGTTGGTGCAAAAGTAATTGTGGTTCTTGCCAGTAAAAGTAATACTTGTTTCTTTATGCTTCTCTCTTCTGATTTTTGGTTCAATTTTTCCTGTCCTCTTTTGGCTACTTGAGTTTCTTATTATTCCAATTTATTTTCACTGTTGGATTAACAAGCTCTTTGTTTTACTTTTTAATGGTTGATCTATGTTTACAATGGGCATTTTTAAGTTATCACAGTTTATCTTTGATTGATGGACCACTTTTGGTATATCGTGTAAAAGCCTACAGCAGTATTCTTCCATCATTTCACCATACCATCCTTTCTGATATTTTGTTGTTCATTTCATTTCTACATATGTTTAAATCCCATAATACATTGTTATTATTTGTAGTTTAGAAAATCAACTGTCTTTAAGAAAAAAAACAGCTTTATATTTATCTATTTCTTAATTCTTGTTTGTTTTTGTTTTGTTTTGAGATGGAGTCTCGTTCTGTTGCCCAGGCTAGAGTGCAATGGCACGATCTTGTCTCACTGCAACCTCTGCCTCCCAGGTTCAGGTGAGTCTCCCGCCTCAGCCTCCCATTTCTCGAGTAGCTGGGATTATAGGCACCCACCATCATGCCTGGCTAATTTTTTGTGTGTGTGTTTTTGTAGAGACAGGGTTTCACCATGTTGACCAGACTGGTCTCGAACTCCTGACCTCAGGTGATCTGTCTGCCTCGGCCTCCCAAAGTTTTGGGATTAGAGGTGTGAGCCAGCATGCCTGGCCTATTTCTTAATTCTTAATCCTTTTTTTTTTTTTTTGAGACAGGGTCTTACTCTGTCACCCAGCCTGGAGTGCAGTGGTGCGATCTCTATTCACTGCAACCTCTGCCTCCCATCTTAATTCTTTTTTATAGAAACGAATTTCCTCTGGCTTTATTTTCTTTCTGTCTGAAGAATTTATTTAACATTGTAATGCTGGTCTACTGGCAATGAATTCTCTCAACTTTTGTTTATCTGAAGAATTATTTCGCTTTCATTTTTTAAAGTTTTTTTGCTACATAAAGAATTTCAGGTGGACATTATTTTTCTTTCAGTACTTAACTATATCATTCCTTGTCTTCTGGCTAGCTTAGTTTCTGAGGGGAACTCTATTACCATTCTCATCTTTTTTTCCTTTGTGTATATGTTTCTTTTCTCTCTTGACTCATTCAAGATTTTATCTTTATCTTTGATTTTCAGCAGTTTGAATACAATGTGCATAGATGTCATTCTCTTTGTATGTAATTTGTTTAGAGTTTGTGAACTTTGCACATCTGTTTTTGGTAGTCTTCCATTCAGCCATGATTTCTTCATGTGTTTCTTCTGTCCCATCCTCTCTTGTTTTTCCTTCGGGGTCTACTCTTACATGGATATTCGGCCATTTTAATCATTCCAGGCTGGCTGTGTGCGGTGGTTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAAGTGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATGTGGTGAAACCCCATCTCTACTAAAAATACAACAAAAATTAGCCGAGCTAATAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAAACCAGGAGGTGGAGGTTGCAATGAGCCAAGATTGTGCCACTGGACTCCAGCCTGGGTGACGAGAGTGAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAATTATTTCAGGCTCTGGACTCTCTGTTCTTCTTTTATTTACTTATTTACTTTTTCTTCTTTTCTCATAAATATAATGTTAAGAAGTAGAAGTCAGACATAAAAGAATAAAACTATGATGGTTCCATATCTGCAAAGTCAAAAAATGCCCAACTAATCTATGAAAATAAAAGTCAGGTTCGGATGTAGGGTTAGAATGTAATGATTGATAGGTGCACGTGGGATTTCTTAGTGTCTGATAAAGTTCTGTTTCTTGATTTGCATGGTTGTTAGACCAGGTGGGTTCACTGCAAAACTTCATGGAACTGTACACATGATTTGTGTACTTTTTCTGGACATGTTATTCTTTTACTTAAAAGTTTATTTTAAAAATCAAAAATAGCTTTCCGTGTGTTTTTCTTCTAAAAGTCATACATTTTGTTTGGGTCCATAATCTTTTCAGAATGTATTTTTATTTATACTCTGGAGAAGGTAAGTTTATTTTTCTCCTACAATAATAGTCAACTCTTCATCATGAATGTTGCATCATTTCCTGGTAGTTTTTATCATAATCTTGGCCATGTATGCACGATCCTTTTCTCGTCTTTCTCTTCTGTTCTATTTATCTATCCTTACACAATACCACACATTAGACATTCTATAGCTTTATGACAAATCTTTGCACCTGATATGGTCAGTCCCTTCTAATTCTCTTCTTTAAAAATTGCCTTGGCTATTATTTGCCTTTTACTCTTACATGTAAATCAGGAAACAGCTTTTAAATTTTATTAAAAATCCTATTGAAATGATATTGAATTGAGATACTAAGTTGGAGAGAATTGACTACTTTATGATGTTGAATTATCCCATCCTGGAATATGCTAGATAATATAAGCACAAAGACTTCTTTTAAGTCTTCTAATAAAATGTTATAATATTCATCATAGATGTCTTAAATATAATTTAGAATAATTACTTCTGCATAATTTTAAAATAGGGTAAATTAGTGCTTCTTTTTAATCACACACTTTGCATTGAGTGTTACCAGTGAAAGGAAATGCTAAAGACTCATTAGTAGGAATCTTGTATATAGTGAAGTTACCATTTTCTTGCTAAGTTCAAATGGTTGGATTCTCTTGGATAGTCTATATGGACATTTGTAAACAATGACGGTTTTGTTTCTCCCCGTCCTTGCCTATCTCTTTTGTTTGTTTGTTTTGTGTCTTCCTACACTGGCTACTCTTTTCCATCCAATGTTAGCCCAGAAACCATGACAGCATGCACTTTAGTCTTCCTCTTAATTTAAAATGAATATTTCCATATTTTCATGCCTAAGTGTGTTTTCTGTATGCTTTGGTATCTCTTTTTTTTTTTTGAGAAGATTAATATAGATCTCTTCTATCCCTTGTTTTAATTTTCATATTTTGAATTATAAATATGCACTGTGTTTTCAAAGAATTTATTTTTCTTTGCATATAGAGGTGATCGTATTGTTCCTTTTTGTTTAATCTACTACTATAATGATTTACCTAAATGAAATGTCCAATATTAAACCAACCTTGATTATATTCCTAAAATACACCTTATTTAAATATGTTATTCTTTTTTAAATATACATTGACAGATGTACTTTGAGGGTCCTCATCTTTATTTGTACATTTTTAGTCAGTTTTACGAGCAAGAGGGTATCTGTTCCATCTGAGCTTGATCCTCTGATGATTCATTAATTCCTTTTAAACTACTGTTTCACTTCCTTTAATGGTTATACTTCTATTCAGGTATATTTCTTCCTGAGTCAATTCTAAGATTTGTTTAGAAAATTACCAATTACATTTAAATGTTCAAAATTATTTAATAAAGTTTTGTATATTTTCATATTATATTTTTCTACTAATTACATTTTCATTTTCTGTCCTTATAGTGTTTGTCCCTTTTCTGTTTTGATCTTGATCAATTTTTATATAATTTTGCATGTTAGTACTATTCTCAAAGACCTATAGTTTGGTTTTCATTTTCTCTTTTTATCTTTGCTTAATCTCTCATTAGTACCTACTCTTATTGATTGATTCCTTCTTTCTGCTATCTTTGCATTTAATCTATTTTTAAATTTTTAAGATAAAATATGGCACATTTATTTTCAGTTTTCTATCCTTTCTATGAAATAATGGGTACAAATTTTTCTCTATTATTTTAGCTGGATCTGTGAGTCTTGATACGGAGTGTTCATTACATTCAATGCTAAATATTTCATATTTTGCATTATAATTTTTTACTCATGTGTTATTTTGTTTCCGAATATATGCTTTATTTACCCTTTTCACAAAAAGTTGTTGATTATAATAAATTAGGAATTTTCTTAATTTATTACAATACAATCAAGAGTTTACTCAGTTTGAGATGAAATTTCTGTATATTTGAGACTTTGTATTTGATCAATTTTCATGACAAGGATTAATTTATAACCATTGAAAGAGGACCCTTCAATTGGCCACTGGCTTATTAGTTATATTGTTGCAATATTCTCTATCCTTACTAGATGTTAGTCTCTATGACCTATCAGTTTTTGAGAGCAATGTATTAAACATCTTATAATTCTATACACTTTTGCCTTATGTATTATGAGGCCATGTTGCTAAATGCCTACAAGTTCAGGATTGTAATCACTTCCTGATCAATTATTTCTTTTTATCATTAACTCTCCGTATTCCTAGCAATGAAATTTGTGTGTCTTTTTGTTTCCATTTCTATTTTCTCAAAGTTATATTTGTCTGCTGGGAGTATAATTGCACTAGTTTTTGTTTTCCTTTTGGTTATTTGCCTGGAATGTGTTTACCTAACCCTTACTTTACACCTTTCTTGGCCCTTATGATTTAATTATGTCCTTCCTGAATTGCATATGTTTTTAAACATCTAACTTAAAGGAATTTAACCTGCCTATAATTAGTATGATTACAGTTGAATAACAGGTTTGAACTGTGCAAGTCCACTGATAAGTGAATTTTTTACAATATTTTAGAATAATTTTTGGACACTTATGACAATTTGAGAAAACTCACAGATGAACTGAGTAGCCTAGAAATATCAAAACAATTAAGAAAAGTTAGATGGTCATAAATGCATAATATGTAGATACTAGTCTTTTTTGTTATTTTCTTCTATAAAATATACACAAATTATAAAAAGTTAAAATTGATCAAAACTTTTATACACACACATACTTATAGACTGTACATGGCAGCATTCACAGTCCAGAAAAATGTACATAAATGTAAAGATACAGCATTCAACCACAACTGCGTAAGATTAACTGTGGTGCATACTGTACTGTTGTAATAATTTTGTAGCCACCTGCTGCTGCTATTATGGTGAGCTAAGTGTGGTAGATTGCAAGTAGCTGCATGAAATGCCACGCGATGCCAATCATCTCCACATGAGCAGCTCATTTCTCCAGTAAACTGTGGATCACAGGAAAAAGTGATCTCTCACGTATTTTTCCTCATGGGTAGTGCAATACAGTAAACCTTAAATAAAACTATGGGACACATATGAAGTGCCACTAGTAATGCTGGGAGTGTTCCCATGAAGCAGAGAAAGTTAGGACATTGCAAGAAAAAGTTGAGCCGGGCGCGGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTTAGGAGATTGAGACCATCCTGGCTAACACGCTGAAACCCCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGCGGCGGGCGCCTGTAGTCGCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCCAGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAAGTTGAATTGCTTGATGGGTACTATAGAGTGAATGGTTACCCACCATGTTAGACAGACGATTCATCTTGTAAACAGAAAACATGAACTTATTATAGTCCTGTAAATGTATTTTCTTTTCCTTATGATGTTTATAACATTTTCTTTTCTCTAGCTTGCTTTATTGCAAGAATACAGCATATAATACCTATAATGTGCTAAATATGTGTTAATTGACTATGTTATTAGTAAAGCTATTAGTAGTTAAGTTTTGGAGGAGCCAAAATCATACATGTATTTTTAACTACACGGGAAGTTGGCATCTCTAATCTTTGTGTTGTTCAAGGGTCAACTGTACTGGTAAACTTGAACTATTCCTAAAATAATATTTAGTTTTTTCTTTTTTTTTT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11399:HG3_PB_assemblyticsfalcon_25495:HG3_PB_SVrefine2Falcon1Dovetail_5336:HG4_PB_assemblyticsfalcon_25093:HG4_PB_pbsv_8767:HG2_PB_pbsv_8749:HG4_PB_SVrefine2Falcon1Dovetail_5317:HG2_10X_allpass_1477:HG4_10X_allpass_1734:HG3_10X_allpass_1775:HG3_Ill_MetaSV_5082:HG2_Ill_tnscope_1021:HG2_Ill_MetaSV_4908:HG4_PB_SVrefine2PBcRDovetail_4362:HG4_Ill_MetaSV_5139:HG3_PB_pbsv_8522:HG3_PB_SVrefine2PBcRDovetail_3964:HG2_PB_SVrefine2PBcRplusDovetail_10601:HG2_PB_SVrefine2PB10Xhap12_6401;NumClusterSVs=19;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11399:HG3_PB_pbsv_8522:HG3_PB_SVrefine2PBcRDovetail_3964:HG2_PB_SVrefine2PBcRplusDovetail_10601:HG2_PB_SVrefine2PB10Xhap12_6401;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0483749;ClusterMaxSizeDiff=0.0483749;ClusterMaxEditDist=0.0483749;PBcalls=12;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-7854;DistBack=2908;DistForward=-7794;DistMin=-7794;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=288;REFWIDENED=7:154391842-154399983;PctSeqSimilarity=0.9167;PctSizeSimilarity=0.9997;PctRecOverlap=0.9924;SizeDiff=2;StartDistance=-60;EndDistance=-58;GTMatch=0;TruScore=96;MatchId=3822.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:58:37:0|1:55:1:0:18:./.:0:0:0:0:0/1:51:10:0/1:396:161:.:.:.
chr7	154910387	HG4_Ill_150bpfermikitraw_11530	TGGTGATGTGGAGGGCAGGCTTTGGGAGAGATGTTTAGCAGATGGTGCATGC	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12059:HG2_PB_PB10Xdip_26791:HG4_PB_HySA_12955:HG3_PB_HySA_13355:HG2_PB_HySA_16049:HG3_PB_pbsv_8545:HG4_PB_assemblyticsfalcon_25104:HG2_PB_assemblyticsPBcR_24916:HG2_PB_assemblyticsfalcon_25709:HG3_PB_assemblyticsfalcon_25514:HG4_PB_pbsv_8785:HG2_PB_pbsv_8768:HG4_Ill_svaba_11280:HG4_Ill_scalpel_8318:HG4_Ill_150bpfermikitraw_11530:HG3_Ill_svaba_11269:HG3_Ill_scalpel_8658:HG3_Ill_250bpfermikitraw_11719:HG2_Ill_svaba_11156:HG2_Ill_scalpel_8532;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12059:HG4_Ill_svaba_11280:HG4_Ill_scalpel_8318:HG4_Ill_150bpfermikitraw_11530:HG3_Ill_svaba_11269:HG3_Ill_scalpel_8658:HG3_Ill_250bpfermikitraw_11719:HG2_Ill_svaba_11156:HG2_Ill_scalpel_8532;NumExactMatchSVs=9;ClusterMaxShiftDist=0.208333;ClusterMaxSizeDiff=0.208333;ClusterMaxEditDist=0.212766;PBcalls=11;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-51;DistBack=18;DistForward=-20;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=32;REFWIDENED=7:154910386-154910471;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3823.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:43:1/1:4:27:0:15:./.:0:0:0:0:1/1:0:14:./.:.:.:.:.:.
chr7	154915793	HG2_PB_SVrefine2Falcon2Bionano_4284	TGGTTTCTCATAGTCAAACAACCGGTTTCTCATAGCCAAACAACCGGTTTCTCATAGCCAAACAACCGGTTTCTCATAGTCAAACAACCGGTTTCTCATAGTCAAACAACCGGTTTCTCATAGTCAAACAACCGGTTTCTCATAGCCAAACAACCGGTTTCTCATAGTCAAACAACCGGTTTCTCATAGTCAAACAACC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3970:HG2_PB_SVrefine2Falcon1plusDovetail_11410:HG2_PB_assemblyticsfalcon_25710:HG4_PB_assemblyticsfalcon_25105:HG2_PB_assemblyticsPBcR_24917:HG2_PB_SVrefine2PBcRplusDovetail_10612:HG4_PB_SVrefine2Falcon1Dovetail_5325:HG4_Ill_GATKHCSBGrefine_6142:HG4_PB_HySA_12956:HG3_PB_pbsv_8546:HG2_PB_pbsv_8769:HG4_PB_pbsv_8786:HG2_Ill_MetaSV_4913:HG4_PB_SVrefine2PBcRDovetail_4369:HG4_Ill_GATKHCSBGrefine_6141:HG2_PB_SVrefine2PB10Xhap12_6415:HG2_PB_SVrefine2Falcon2Bionano_4284;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4284:HG2_PB_SVrefine2PB10Xhap12_6415:HG4_Ill_GATKHCSBGrefine_6141:HG4_PB_SVrefine2PBcRDovetail_4369;NumExactMatchSVs=4;ClusterMaxShiftDist=0.252809;ClusterMaxSizeDiff=0.247191;ClusterMaxEditDist=0.322034;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-198;DistBack=5346;DistForward=-178;DistMin=-178;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=393;REFWIDENED=7:154915794-154916384;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3824.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:32:./.:24:15:6:18:./.:0:0:0:0:./.:1:10:./.:.:.:.:.:.
chr7	154941915	HG2_PB_SVrefine2Falcon1plusDovetail_11411	TAAGAAAAGTGGGTGCAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAACCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACCCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1252:HG2_PB_SVrefine2PB10Xhap12_6420:HG4_PB_pbsv_8788:HG4_Ill_Krunchall_12701:HG3_Ill_Krunchall_12090:HG2_Ill_Krunchall_12404:HG4_Ill_Spiral_731:HG3_Ill_Spiral_9446:HG3_PB_pbsv_8548:HG4_PB_HySA_12957:HG3_Ill_MetaSV_5087:HG2_PB_HySA_16050:HG2_Ill_tnscope_1024:HG2_Ill_MetaSV_4914:HG4_PB_SVrefine2PBcRDovetail_4371:HG4_Ill_manta_2179:HG4_10X_allpass_1738:HG3_PB_SVrefine2PBcRDovetail_3972:HG3_PB_SVrefine2Falcon1Dovetail_5348:HG3_Ill_SVrefine2DISCOVARDovetail_6572:HG3_Ill_GATKHCSBGrefine_5968:HG3_10X_allpass_1777:HG2_PB_pbsv_8771:HG2_PB_SVrefine2PBcRplusDovetail_10614:HG2_PB_SVrefine2PB10Xhap12_6419:HG2_PB_SVrefine2Falcon2Bionano_4285:HG2_PB_SVrefine2Falcon1plusDovetail_11411:HG2_Ill_manta_2532:HG2_Ill_SVrefine2DISCOVARplusDovetail_12511:HG2_Ill_GATKHCSBGrefine_6057:HG2_10X_allpass_1479;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_1479:HG2_Ill_GATKHCSBGrefine_6057:HG2_Ill_SVrefine2DISCOVARplusDovetail_12511:HG2_Ill_manta_2532:HG2_PB_SVrefine2Falcon1plusDovetail_11411:HG2_PB_SVrefine2Falcon2Bionano_4285:HG2_PB_SVrefine2PB10Xhap12_6419:HG2_PB_SVrefine2PBcRplusDovetail_10614:HG2_PB_pbsv_8771:HG3_10X_allpass_1777:HG3_Ill_GATKHCSBGrefine_5968:HG3_Ill_SVrefine2DISCOVARDovetail_6572:HG3_PB_SVrefine2Falcon1Dovetail_5348:HG3_PB_SVrefine2PBcRDovetail_3972:HG4_10X_allpass_1738:HG4_Ill_manta_2179:HG4_PB_SVrefine2PBcRDovetail_4371;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.0588235;PBcalls=13;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-330;DistForward=-313;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=7:154941916-154942261;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3825.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:31:0|1:22:1:1:34:./.:0:0:0:0:0/1:25:20:0/1:25:5:.:.:.
chr7	155163733	HG2_Ill_GATKHCSBGrefine_6059	GTGAAAGTTAGTCATTGTTACAGGGGTGGCTACTAGTTCCACCTGTCCCCAGACACTGTGTGCCCCACC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11352:HG2_PB_assemblyticsfalcon_25722:HG3_PB_assemblyticsfalcon_25526:HG2_Ill_breakscan11_1253:HG3_PB_pbsv_8560:HG4_PB_pbsv_8798:HG2_PB_pbsv_8781:HG4_Ill_GATKHC_14459:HG4_Ill_GATKHCSBGrefine_6146:HG4_Ill_250bpfermikitraw_12027:HG3_Ill_GATKHC_14390:HG3_Ill_GATKHCSBGrefine_5970:HG3_Ill_250bpfermikitraw_11730:HG2_PB_assemblyticsPBcR_24926:HG2_Ill_Krunchall_12410:HG2_Ill_GATKHC_14415:HG2_Ill_GATKHCSBGrefine_6059:HG2_Ill_250bpfermikitraw_12067;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11352:HG4_Ill_GATKHC_14459:HG4_Ill_GATKHCSBGrefine_6146:HG4_Ill_250bpfermikitraw_12027:HG3_Ill_GATKHC_14390:HG3_Ill_GATKHCSBGrefine_5970:HG3_Ill_250bpfermikitraw_11730:HG2_PB_assemblyticsPBcR_24926:HG2_Ill_Krunchall_12410:HG2_Ill_GATKHC_14415:HG2_Ill_GATKHCSBGrefine_6059:HG2_Ill_250bpfermikitraw_12067;NumExactMatchSVs=12;ClusterMaxShiftDist=0.057971;ClusterMaxSizeDiff=0.057971;ClusterMaxEditDist=0.0746269;PBcalls=6;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-68;DistBack=2500;DistForward=28418;DistMin=2500;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=136;REFWIDENED=7:155163734-155163937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3826.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:./.:5:11:0:24:./.:0:0:0:0:1/1:1:31:./.:.:.:.:.:.
chr7	155694539	HG3_PB_SVrefine2Falcon1Dovetail_5365	CCCACCCATGTCCTCCGTGACCACCAGGAAGGTGATGGCTCCGAACAGGGCCTCCACTCACGGGTTACCGAGGTACCTCCACCTGTGTCGTCAGTGACCACAAGGAGGGTGATGGCTCCGAACAGGGCCTCCACTCACGGGTTACCGAGGTACCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6290:HG2_PB_pbsv_8790:HG4_Ill_GATKHCSBGrefine_6150:HG4_10X_allpass_1739:HG2_Ill_SpiralSDKrefine_16462:HG4_PB_pbsv_8809:HG2_PB_SVrefine2PB10Xhap12_6436:HG4_PB_SVrefine2PBcRDovetail_4380:HG4_Ill_SVrefine2DISCOVARDovetail_6385:HG3_PB_SVrefine2Falcon1Dovetail_5365:HG2_PB_SVrefine2PB10Xhap12_6435:HG2_PB_SVrefine2Falcon2Bionano_4297:HG2_PB_SVrefine2Falcon1plusDovetail_11425:HG2_Ill_SVrefine2DISCOVARplusDovetail_12517;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6290:HG4_PB_SVrefine2PBcRDovetail_4380:HG4_Ill_SVrefine2DISCOVARDovetail_6385:HG3_PB_SVrefine2Falcon1Dovetail_5365:HG2_PB_SVrefine2PB10Xhap12_6435:HG2_PB_SVrefine2Falcon2Bionano_4297:HG2_PB_SVrefine2Falcon1plusDovetail_11425:HG2_Ill_SVrefine2DISCOVARplusDovetail_12517;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00649351;ClusterMaxSizeDiff=0.00647249;ClusterMaxEditDist=0.0453074;PBcalls=8;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-154;DistBack=-78;DistForward=12283;DistMin=-78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=154;REFWIDENED=7:155694540-155694847;PctSeqSimilarity=0.9625;PctSizeSimilarity=1;PctRecOverlap=0.8129;SizeDiff=0;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=92;MatchId=3828.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:27:0|1:24:4:5:16:./.:0:0:0:0:0/1:39:19:./.:.:.:.:.:.
chr7	155706977	HG3_Ill_GATKHC_14402	CGGATTGCCCCCTCTCCCCGGCATACTGCTGGGTCATACGGAGCTGGTCACTCAT	C	20	PASS	ClusterIDs=HG2_PB_HySA_16093:HG3_PB_pbsv_8570:HG2_PB_assemblyticsPBcR_24938:HG3_PB_assemblyticsfalcon_25543:HG2_PB_pbsv_8791:HG2_PB_assemblyticsfalcon_25737:HG3_Ill_svaba_11289:HG3_Ill_scalpel_8670:HG3_Ill_Krunchall_12104:HG3_Ill_GATKHC_14402:HG3_Ill_GATKHCSBGrefine_5975:HG3_Ill_250bpfermikitraw_11740:HG3_Ill_150bpfermikitraw_11436:HG2_Ill_svaba_11169:HG2_Ill_scalpel_8543:HG2_Ill_SpiralSDKrefine_16463:HG2_Ill_Krunchall_12415:HG2_Ill_GATKHC_14428:HG2_Ill_GATKHCSBGrefine_6062:HG2_Ill_250bpfermikitraw_12076:HG2_Ill_150bpfermikitraw_11361;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11361:HG2_Ill_250bpfermikitraw_12076:HG2_Ill_GATKHCSBGrefine_6062:HG2_Ill_GATKHC_14428:HG2_Ill_Krunchall_12415:HG2_Ill_SpiralSDKrefine_16463:HG2_Ill_scalpel_8543:HG2_Ill_svaba_11169:HG3_Ill_150bpfermikitraw_11436:HG3_Ill_250bpfermikitraw_11740:HG3_Ill_GATKHCSBGrefine_5975:HG3_Ill_GATKHC_14402:HG3_Ill_Krunchall_12104:HG3_Ill_scalpel_8670:HG3_Ill_svaba_11289;NumExactMatchSVs=15;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.175439;PBcalls=6;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=12283;DistForward=5156;DistMin=5156;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=112;REFWIDENED=7:155706908-155707073;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3829.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:0|1:22:6:2:14:./.:0:0:0:0:0/1:18:13:./.:.:.:.:.:.
chr7	155926191	HG2_PB_SVrefine2Falcon1plusDovetail_11430	ACTTACAGGCAACTGATCTTTGACAAAGCAAATAAAAACATAAAGTGGGGAATGGACACACTATTCAACAAATTGTGCTAGGATAATTGGCAAG	A	20	PASS	ClusterIDs=HG2_PB_HySA_16103:HG2_PB_HySA_16104:HG4_PB_assemblyticsfalcon_25135:HG4_PB_SVrefine2PBcRDovetail_4385:HG4_PB_SVrefine2Falcon1Dovetail_5344:HG4_Ill_svaba_11296:HG4_Ill_scalpel_8328:HG4_Ill_manta_2184:HG4_Ill_SVrefine2DISCOVARDovetail_6390:HG4_Ill_Krunchall_12716:HG4_Ill_GATKHC_14474:HG4_Ill_GATKHCSBGrefine_6152:HG4_Ill_250bpfermikitraw_12040:HG4_Ill_150bpfermikitraw_11556:HG4_CG_vcfBeta_5775:HG4_10X_allpass_1740:HG3_PB_pbsv_8579:HG3_Ill_svaba_11293:HG3_Ill_manta_2073:HG3_Ill_Krunchall_12107:HG3_Ill_GATKHC_14407:HG3_Ill_GATKHCSBGrefine_5977:HG3_Ill_250bpfermikitraw_11745:HG3_Ill_150bpfermikitraw_11441:HG3_10X_allpass_1779:HG2_PB_SVrefine2PBcRplusDovetail_10630:HG2_PB_SVrefine2PB10Xhap12_6442:HG2_PB_SVrefine2Falcon2Bionano_4302:HG2_PB_SVrefine2Falcon1plusDovetail_11430:HG2_Ill_svaba_11173:HG2_Ill_scalpel_8548:HG2_Ill_manta_2540:HG2_Ill_SpiralSDKrefine_16466:HG2_Ill_SVrefine2DISCOVARplusDovetail_12520:HG2_Ill_Krunchall_12419:HG2_Ill_GATKHC_14431:HG2_Ill_GATKHCSBGrefine_6064:HG2_Ill_250bpfermikitraw_12082:HG2_Ill_150bpfermikitraw_11366:HG2_CG_vcfBeta_5124:HG2_10X_allpass_1480:HG2_10X_SVrefine210Xhap12_6295:HG3_PB_HySA_13392:HG2_PB_assemblyticsfalcon_25743:HG2_PB_assemblyticsPBcR_24945:HG2_PB_pbsv_8800:HG4_PB_pbsv_8819;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6295:HG2_10X_allpass_1480:HG2_CG_vcfBeta_5124:HG2_Ill_150bpfermikitraw_11366:HG2_Ill_250bpfermikitraw_12082:HG2_Ill_GATKHCSBGrefine_6064:HG2_Ill_GATKHC_14431:HG2_Ill_Krunchall_12419:HG2_Ill_SVrefine2DISCOVARplusDovetail_12520:HG2_Ill_SpiralSDKrefine_16466:HG2_Ill_manta_2540:HG2_Ill_scalpel_8548:HG2_Ill_svaba_11173:HG2_PB_SVrefine2Falcon1plusDovetail_11430:HG2_PB_SVrefine2Falcon2Bionano_4302:HG2_PB_SVrefine2PB10Xhap12_6442:HG2_PB_SVrefine2PBcRplusDovetail_10630:HG3_10X_allpass_1779:HG3_Ill_150bpfermikitraw_11441:HG3_Ill_250bpfermikitraw_11745:HG3_Ill_GATKHCSBGrefine_5977:HG3_Ill_GATKHC_14407:HG3_Ill_Krunchall_12107:HG3_Ill_manta_2073:HG3_Ill_svaba_11293:HG3_PB_pbsv_8579:HG4_10X_allpass_1740:HG4_CG_vcfBeta_5775:HG4_Ill_150bpfermikitraw_11556:HG4_Ill_250bpfermikitraw_12040:HG4_Ill_GATKHCSBGrefine_6152:HG4_Ill_GATKHC_14474:HG4_Ill_Krunchall_12716:HG4_Ill_SVrefine2DISCOVARDovetail_6390:HG4_Ill_manta_2184:HG4_Ill_scalpel_8328:HG4_Ill_svaba_11296:HG4_PB_SVrefine2Falcon1Dovetail_5344:HG4_PB_SVrefine2PBcRDovetail_4385:HG4_PB_assemblyticsfalcon_25135;NumExactMatchSVs=40;ClusterMaxShiftDist=0.0210526;ClusterMaxSizeDiff=0.0210526;ClusterMaxEditDist=0.0425532;PBcalls=15;Illcalls=26;TenXcalls=4;CGcalls=2;PBexactcalls=8;Illexactcalls=26;TenXexactcalls=4;CGexactcalls=2;HG2count=22;HG3count=10;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-93;DistBack=12774;DistForward=6836;DistMin=6836;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=7:155926192-155926285;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3830.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:2:17:0:17:./.:0:0:0:0:1/1:0:40:./.:.:.:.:.:.
chr7	156135191	HG2_Ill_manta_2541	TAATCCTCCTTGTCTACCTGGAGAAAGGAGAGGGCTTTGGTCTATGTTGCTGAGCTTGCG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6299:HG4_PB_HySA_12992:HG4_PB_assemblyticsfalcon_25141:HG4_Ill_svaba_11300:HG4_Ill_scalpel_8332:HG4_Ill_Krunchall_12722:HG4_Ill_GATKHC_14480:HG4_Ill_GATKHCSBGrefine_6154:HG4_Ill_250bpfermikitraw_12044:HG4_Ill_150bpfermikitraw_11561:HG2_Ill_svaba_11175:HG4_Ill_Spiral_733:HG4_PB_pbsv_8822:HG2_PB_pbsv_8805:HG2_PB_HySA_16115:HG4_Ill_svaba_11299:HG4_Ill_scalpel_8331:HG4_Ill_Krunchall_12721:HG4_Ill_GATKHC_14479:HG4_Ill_GATKHCSBGrefine_6153:HG4_Ill_250bpfermikitraw_12043:HG4_Ill_150bpfermikitraw_11560:HG2_Ill_svaba_11174:HG2_Ill_manta_2541:HG2_Ill_SpiralSDKrefine_16468:HG2_Ill_Krunchall_12423:HG2_Ill_GATKHC_14434:HG2_Ill_GATKHCSBGrefine_6065:HG2_Ill_250bpfermikitraw_12084:HG2_Ill_150bpfermikitraw_11369:HG4_Ill_SVrefine2DISCOVARDovetail_6392:HG3_PB_SVrefine2Falcon1Dovetail_5372:HG2_PB_SVrefine2PBcRplusDovetail_10633:HG2_PB_SVrefine2Falcon1plusDovetail_11433:HG2_Ill_SVrefine2DISCOVARplusDovetail_12523;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11369:HG2_Ill_250bpfermikitraw_12084:HG2_Ill_GATKHCSBGrefine_6065:HG2_Ill_GATKHC_14434:HG2_Ill_Krunchall_12423:HG2_Ill_SpiralSDKrefine_16468:HG2_Ill_manta_2541:HG2_Ill_svaba_11174:HG4_Ill_150bpfermikitraw_11560:HG4_Ill_250bpfermikitraw_12043:HG4_Ill_GATKHCSBGrefine_6153:HG4_Ill_GATKHC_14479:HG4_Ill_Krunchall_12721:HG4_Ill_scalpel_8331:HG4_Ill_svaba_11299;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.166667;PBcalls=8;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=19;NumTechs=3;NumTechsExact=1;SVLEN=-59;DistBack=10493;DistForward=-33;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=63;REFWIDENED=7:156135161-156135282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3831.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:26:0:2:25:./.:0:0:0:0:0/1:16:16:./.:.:.:.:.:.
chr7	156931490	HG2_Ill_manta_2543	GCGCGCACGTCTGCAGGGCCGCGCACGTCTGCAGGGCCGCGCACGTCTGCAGGGC	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_626:HG2_PB_pbsv_8809:HG4_PB_pbsv_8829:HG4_Ill_svaba_11308:HG4_Ill_GATKHCSBGrefine_6157:HG2_Ill_svaba_11185:HG2_Ill_manta_2543:HG2_Ill_SpiralSDKrefine_16474:HG2_Ill_SVrefine2DISCOVARplusDovetail_12525:HG2_Ill_GATKHCSBGrefine_6068:HG2_Ill_250bpfermikitraw_12092:HG4_Ill_Spiral_734;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12092:HG2_Ill_GATKHCSBGrefine_6068:HG2_Ill_SVrefine2DISCOVARplusDovetail_12525:HG2_Ill_SpiralSDKrefine_16474:HG2_Ill_manta_2543:HG2_Ill_svaba_11185:HG4_Ill_GATKHCSBGrefine_6157:HG4_Ill_svaba_11308;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.0740741;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=51973;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=80;REFWIDENED=7:156931491-156931624;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3832.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:18:0|1:24:0:3:14:./.:0:0:0:0:0/1:26:17:./.:.:.:.:.:.
chr7	157256596	HG3_PB_assemblyticsfalcon_25577	CACTCACCCCATCCTCACCCCCATCCATCCCCACCCCATCCTCACCCCCATCTGTCCA	C	10	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_25577:HG3_PB_assemblyticsfalcon_25578:HG2_PB_pbsv_8819:HG4_PB_pbsv_8837;NumClusterSVs=4;ExactMatchIDs=HG3_PB_assemblyticsfalcon_25577;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0172414;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.0683761;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-57;DistBack=353;DistForward=-28;DistMin=-28;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=7:157256595-157256654;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9828;PctRecOverlap=0.5254;SizeDiff=-1;StartDistance=28;EndDistance=27;GTMatch=0;TruScore=83;MatchId=3833.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:34:./.:8:14:12:19:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr7	157825833	HG4_Ill_150bpfermikitraw_11589	AGTGGCCACCAAGCCTGACAGAGCCATTGGGGGCCACGAATAAAGCCTTGGTGCCTGGTG	A	20	PASS	ClusterIDs=HG2_10X_allpass_1485:HG4_PB_HySA_13065:HG4_PB_HySA_13064:HG3_PB_HySA_13483:HG4_PB_assemblyticsfalcon_25210:HG3_PB_assemblyticsfalcon_25642:HG3_PB_pbsv_8650:HG2_PB_pbsv_8866:HG4_PB_pbsv_8889:HG4_Ill_svaba_11344:HG4_Ill_manta_2191:HG4_Ill_Krunchall_12746:HG4_Ill_GATKHC_14531:HG4_Ill_GATKHCSBGrefine_6181:HG4_Ill_Cortex_3558:HG4_Ill_250bpfermikitraw_12071:HG4_Ill_150bpfermikitraw_11589:HG4_10X_allpass_1745:HG3_Ill_svaba_11344:HG3_Ill_scalpel_8701:HG3_Ill_manta_2083:HG3_Ill_Krunchall_12144:HG3_Ill_GATKHC_14471:HG3_Ill_GATKHCSBGrefine_6010:HG3_Ill_Cortex_3580:HG3_Ill_250bpfermikitraw_11783:HG3_Ill_150bpfermikitraw_11473:HG2_Ill_svaba_11223:HG2_Ill_manta_2552:HG2_Ill_SpiralSDKrefine_16492:HG2_Ill_Krunchall_12452:HG2_Ill_GATKHC_14490:HG2_Ill_GATKHCSBGrefine_6085:HG2_Ill_Cortex_8650:HG2_Ill_250bpfermikitraw_12117:HG2_Ill_150bpfermikitraw_11392;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_1485:HG4_PB_pbsv_8889:HG4_Ill_svaba_11344:HG4_Ill_manta_2191:HG4_Ill_Krunchall_12746:HG4_Ill_GATKHC_14531:HG4_Ill_GATKHCSBGrefine_6181:HG4_Ill_Cortex_3558:HG4_Ill_250bpfermikitraw_12071:HG4_Ill_150bpfermikitraw_11589:HG4_10X_allpass_1745:HG3_Ill_svaba_11344:HG3_Ill_scalpel_8701:HG3_Ill_manta_2083:HG3_Ill_Krunchall_12144:HG3_Ill_GATKHC_14471:HG3_Ill_GATKHCSBGrefine_6010:HG3_Ill_Cortex_3580:HG3_Ill_250bpfermikitraw_11783:HG3_Ill_150bpfermikitraw_11473:HG2_Ill_svaba_11223:HG2_Ill_manta_2552:HG2_Ill_SpiralSDKrefine_16492:HG2_Ill_Krunchall_12452:HG2_Ill_GATKHC_14490:HG2_Ill_GATKHCSBGrefine_6085:HG2_Ill_Cortex_8650:HG2_Ill_250bpfermikitraw_12117:HG2_Ill_150bpfermikitraw_11392;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0840336;PBcalls=8;Illcalls=26;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=26;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-59;DistBack=3418;DistForward=10164;DistMin=3418;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=7:157825834-157825918;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3835.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:24:1|0:5:32:31:5:./.:0:0:0:0:0/1:34:23:./.:.:.:.:.:.
chr7	157897883	HG4_Ill_scalpel_8354	TCACCCTCAGCTCCATCCCAACTCCACTCAGCTCCATCAAACTCCATCCCAACTC	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_25221:HG4_Ill_svaba_11351:HG4_PB_pbsv_8900:HG2_PB_pbsv_8875:HG4_Ill_scalpel_8354:HG4_Ill_GATKHCSBGrefine_6182:HG4_Ill_250bpfermikitraw_12075:HG2_Ill_svaba_11231:HG2_Ill_250bpfermikitraw_12122:HG2_PB_assemblyticsfalcon_25816;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12122:HG2_Ill_svaba_11231:HG4_Ill_250bpfermikitraw_12075:HG4_Ill_GATKHCSBGrefine_6182:HG4_Ill_scalpel_8354:HG4_Ill_svaba_11351;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.201835;PBcalls=4;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=-3;DistForward=4752;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=77;REFWIDENED=7:157897882-157898015;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3837.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:21:./.:12:10:8:6:./.:0:0:0:0:0/1:5:9:./.:.:.:.:.:.
chr7	157991349	HG4_PB_SVrefine2PBcRDovetail_4408	CCTGGTTCTCAGGTCCTCCTTAGCCCTTAGCATGTTCTTCTCAGGTTCTGGCTTCTCAGGTCCTCCTTAGCCCTTAGCATGTTCTTCTCAGGTT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12540:HG4_PB_SVrefine2Falcon1Dovetail_5390:HG4_PB_assemblyticsfalcon_25226:HG2_PB_pbsv_8885:HG3_PB_pbsv_8668:HG4_PB_pbsv_8914:HG2_PB_HySA_16222:HG4_PB_SVrefine2PBcRDovetail_4408:HG2_PB_SVrefine2PBcRplusDovetail_10671:HG2_PB_SVrefine2PB10Xhap12_6492:HG2_PB_SVrefine2Falcon2Bionano_4334:HG2_PB_SVrefine2Falcon1plusDovetail_11471;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12540:HG4_PB_SVrefine2PBcRDovetail_4408:HG2_PB_SVrefine2PBcRplusDovetail_10671:HG2_PB_SVrefine2PB10Xhap12_6492:HG2_PB_SVrefine2Falcon2Bionano_4334:HG2_PB_SVrefine2Falcon1plusDovetail_11471;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0531915;ClusterMaxSizeDiff=0.0531915;ClusterMaxEditDist=0.0855615;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-93;DistBack=9870;DistForward=-90;DistMin=-90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=281;REFWIDENED=7:157991350-157991723;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9894;PctRecOverlap=0.9474;SizeDiff=-1;StartDistance=-4;EndDistance=-5;GTMatch=0;TruScore=97;MatchId=3838.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:47:1/1:5:22:2:16:./.:0:0:0:0:0/0:32:2:./.:.:.:.:.:.
chr7	158029474	HG2_PB_SVrefine2Falcon1plusDovetail_11472	CCACTCTGCTGTGGGGAAAAGCAAGAGAGATCAGATTGTTACTGTGTCTGTGTAGAAAGAAGTAGACATAGGAGACTCCATTTTGTTATGTACTAAGAAAAATTCTTCTGCCTTGAGATTCTGTTAATCTATGACCTTACCCCCAACCCCGTGCTCTGTGAAACATGTGCTGTGTCAACTCAGAGTTGAATGGATTAAGGGCGGTGCAGGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCCTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAAAACTGCGGAAGGCCGCAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGTCTGAAATATGGCCTCGTGGGAAGGGAAAGACCTGACCGTCCCCCAGCCCGACACCCGTAAAGGGTCTGTGCTGAGGAGGATTAGTAAAAGAGGAGGGAATGCCTCTTGCAGTTGAGACAAGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCGGTATAAAACCCGATTGTATGCTCCATCTACTGAGATAGGGAAAAACCGCCTTAGGGCTGGAGGTGGGACCTGCGGGCAGCAATACTGCTTTGTAAAGCACTGAGATGTTTATGTGTATGCATATCTAAAAGCACAGCACTTAATCCTTTACATTGTCTATGATGCAAAGACCTTTGTTCACATGTTTGTCTGCTGACCCTCTCCCCACAATTGTCTTGTGACCCTGACACATCCCCCTCTTCGAGAAACACCCACAGATGATCAATAAATACTAAGGGAACTCAGAGGCTGGCGGGATCCTCCATATGCTGAACGCTGGTTCCCCGGGTCCCCTTATTTCTTTCTCTATACTTTGTCTCTGTGTCTTTTTCTTTTCCAAATCTCTCGTCCCACCTTACGAGAAACACCCACAGGTGTGTAGGGGCAACCCACCCCTA	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_1027:HG3_PB_pbsv_8669:HG3_PB_assemblyticsfalcon_25662:HG2_PB_HySA_16223:HG3_PB_SVrefine2PBcRDovetail_4009:HG3_PB_SVrefine2Falcon1Dovetail_5415:HG3_Ill_manta_2086:HG3_Ill_SVrefine2DISCOVARDovetail_6615:HG3_Ill_MetaSV_5106:HG3_Ill_GATKHCSBGrefine_6013:HG3_10X_allpass_1785:HG2_PB_pbsv_8886:HG2_PB_SVrefine2PBcRplusDovetail_10672:HG2_PB_SVrefine2PB10Xhap12_6493:HG2_PB_SVrefine2Falcon2Bionano_4335:HG2_PB_SVrefine2Falcon1plusDovetail_11472:HG2_Ill_manta_2555:HG2_Ill_breakscan11_1281:HG2_Ill_SpiralSDKrefine_16500:HG2_Ill_MetaSV_4928:HG2_10X_allpass_1486:HG2_10X_SVrefine210Xhap12_6346;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6346:HG2_10X_allpass_1486:HG2_Ill_MetaSV_4928:HG2_Ill_SpiralSDKrefine_16500:HG2_Ill_breakscan11_1281:HG2_Ill_manta_2555:HG2_PB_SVrefine2Falcon1plusDovetail_11472:HG2_PB_SVrefine2Falcon2Bionano_4335:HG2_PB_SVrefine2PB10Xhap12_6493:HG2_PB_SVrefine2PBcRplusDovetail_10672:HG2_PB_pbsv_8886:HG3_10X_allpass_1785:HG3_Ill_GATKHCSBGrefine_6013:HG3_Ill_MetaSV_5106:HG3_Ill_SVrefine2DISCOVARDovetail_6615:HG3_Ill_manta_2086:HG3_PB_SVrefine2Falcon1Dovetail_5415:HG3_PB_SVrefine2PBcRDovetail_4009;NumExactMatchSVs=18;ClusterMaxShiftDist=0.01544;ClusterMaxSizeDiff=0.01544;ClusterMaxEditDist=0.01544;PBcalls=10;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-974;DistBack=2243;DistForward=-968;DistMin=-968;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=7:158029475-158030456;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3839.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:./.:4:20:13:7:./.:0:0:0:0:0/1:47:12:0/1:90:32:1820:.:.
chr7	158037861	HG2_Ill_svaba_11243	TCCATGGCCATGCCGGAATCCGTGGTCATGCTGGAATCCACGGTCATGCCGGAAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6347:HG4_PB_pbsv_8915:HG4_PB_assemblyticsfalcon_25228:HG4_PB_HySA_13085:HG4_Ill_svaba_11363:HG2_PB_pbsv_8887:HG3_PB_pbsv_8670:HG2_PB_HySA_16225:HG4_Ill_Krunchall_12754:HG4_Ill_GATKHC_14548:HG4_Ill_GATKHCSBGrefine_6183:HG4_Ill_250bpfermikitraw_12079:HG4_Ill_150bpfermikitraw_11596:HG3_Ill_svaba_11357:HG3_Ill_Krunchall_12150:HG3_Ill_250bpfermikitraw_11790:HG2_Ill_svaba_11243:HG2_Ill_SpiralSDKrefine_16501:HG2_Ill_GATKHC_14505:HG2_Ill_GATKHCSBGrefine_6089:HG2_Ill_250bpfermikitraw_12127:HG2_Ill_150bpfermikitraw_11399:HG2_PB_HySA_16224:HG4_PB_SVrefine2PBcRDovetail_4409:HG4_Ill_SVrefine2DISCOVARDovetail_6409:HG2_PB_SVrefine2PBcRplusDovetail_10673:HG2_PB_SVrefine2PB10Xhap12_6494:HG2_PB_SVrefine2Falcon2Bionano_4336:HG2_PB_SVrefine2Falcon1plusDovetail_11473:HG2_Ill_SVrefine2DISCOVARplusDovetail_12541;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11399:HG2_Ill_250bpfermikitraw_12127:HG2_Ill_GATKHCSBGrefine_6089:HG2_Ill_GATKHC_14505:HG2_Ill_SpiralSDKrefine_16501:HG2_Ill_svaba_11243:HG3_Ill_250bpfermikitraw_11790:HG3_Ill_Krunchall_12150:HG3_Ill_svaba_11357:HG4_Ill_150bpfermikitraw_11596:HG4_Ill_250bpfermikitraw_12079:HG4_Ill_GATKHCSBGrefine_6183:HG4_Ill_GATKHC_14548:HG4_Ill_Krunchall_12754:HG4_Ill_svaba_11363;NumExactMatchSVs=15;ClusterMaxShiftDist=0.2;ClusterMaxSizeDiff=0.2;ClusterMaxEditDist=0.31405;PBcalls=12;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=4;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-54;DistBack=1375;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=167;REFWIDENED=7:158037806-158038026;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3840.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:55:1/1:5:26:4:23:./.:0:0:0:0:1/1:0:37:./.:.:.:1820:.:.
chr7	158041473	HG2_Ill_GATKHCSBGrefine_6090	TCACATATGTGCATATAGATGACACACGTGCACACATGCCACACGCATGCACCCACGTCACATACATGCACATACACATGCACACACCACACATATGCACGCATCACACGCAG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11400:HG2_10X_SVrefine210Xhap12_6348:HG4_PB_SVrefine2Falcon1Dovetail_5391:HG4_PB_HySA_13086:HG2_PB_pbsv_8888:HG4_PB_pbsv_8916:HG3_Ill_MetaSV_5107:HG2_PB_HySA_16226:HG2_Ill_MetaSV_4929:HG4_PB_SVrefine2PBcRDovetail_4410:HG4_Ill_svaba_11364:HG4_Ill_scalpel_8357:HG4_Ill_SVrefine2DISCOVARDovetail_6410:HG4_Ill_GATKHC_14549:HG4_Ill_GATKHCSBGrefine_6184:HG4_Ill_250bpfermikitraw_12080:HG4_Ill_150bpfermikitraw_11597:HG3_PB_SVrefine2Falcon1Dovetail_5416:HG3_Ill_svaba_11358:HG3_Ill_scalpel_8707:HG3_Ill_manta_2087:HG3_Ill_SVrefine2DISCOVARDovetail_6616:HG3_Ill_GATKHC_14480:HG3_Ill_GATKHCSBGrefine_6014:HG2_PB_SVrefine2PBcRplusDovetail_10674:HG2_PB_SVrefine2PB10Xhap12_6495:HG2_PB_SVrefine2Falcon2Bionano_4337:HG2_PB_SVrefine2Falcon1plusDovetail_11474:HG2_Ill_svaba_11244:HG2_Ill_scalpel_8583:HG2_Ill_manta_2556:HG2_Ill_SVrefine2DISCOVARplusDovetail_12542:HG2_Ill_GATKHC_14506:HG2_Ill_GATKHCSBGrefine_6090:HG2_Ill_250bpfermikitraw_12128;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11400:HG4_PB_SVrefine2PBcRDovetail_4410:HG4_Ill_svaba_11364:HG4_Ill_scalpel_8357:HG4_Ill_SVrefine2DISCOVARDovetail_6410:HG4_Ill_GATKHC_14549:HG4_Ill_GATKHCSBGrefine_6184:HG4_Ill_250bpfermikitraw_12080:HG4_Ill_150bpfermikitraw_11597:HG3_PB_SVrefine2Falcon1Dovetail_5416:HG3_Ill_svaba_11358:HG3_Ill_scalpel_8707:HG3_Ill_manta_2087:HG3_Ill_SVrefine2DISCOVARDovetail_6616:HG3_Ill_GATKHC_14480:HG3_Ill_GATKHCSBGrefine_6014:HG2_PB_SVrefine2PBcRplusDovetail_10674:HG2_PB_SVrefine2PB10Xhap12_6495:HG2_PB_SVrefine2Falcon2Bionano_4337:HG2_PB_SVrefine2Falcon1plusDovetail_11474:HG2_Ill_svaba_11244:HG2_Ill_scalpel_8583:HG2_Ill_manta_2556:HG2_Ill_SVrefine2DISCOVARplusDovetail_12542:HG2_Ill_GATKHC_14506:HG2_Ill_GATKHCSBGrefine_6090:HG2_Ill_250bpfermikitraw_12128;NumExactMatchSVs=27;ClusterMaxShiftDist=0.110599;ClusterMaxSizeDiff=0.110599;ClusterMaxEditDist=0.308411;PBcalls=11;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-112;DistBack=-5820;DistForward=-113;DistMin=-5820;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=454;REFWIDENED=7:158041234-158041799;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3841.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:67:1/1:3:16:2:16:./.:0:0:0:0:1/1:0:12:./.:.:.:1820:.:.
chr7	158046549	HG4_PB_SVrefine2Falcon1Dovetail_5392	AAGCATCCCTGTAACTGCACGGCGGCACAGAGCCACTGCCCACGGCACGACCCGCCCTCCATCTCTACGTTCAGGAGCATCCCTGTAACTGGACAGCAGCACAGAGCCACTGCCCACGGCACGACCCGCCCTCCATCTCCACGTTCAGGAGCATCCCTGTAACTGGACAGCAGCACAGAGCCACTGCCCACGGCACGACCCGCCCTCCATCTCCACGTTCAGGAGCATCCCTGTAACTGGACAGCAGCACAGAGCCACTGCCCACGGCATGACCCGCCCTCCATCTCCACGTTCAGGAGCATCCCTGTAACTGGACAGTGGCACAGAGCCACTGCCGCCCACAGCACAACCCGCCCCCCATCTCCACGTTCAGGAGCATCCCTGTAACTGGACAGCGGCACAGAGCCACTGCCCACGGCACGACCCGCCCTCCATCTCCACGTTCAGGAGCATCCCTGTAACTGGACAGTGGCACAGAGCCACTGCCCACGGCACGACCCGCCCTCCATCTCCACGTTCAGGAGCATCCCTGTAACTGGACAGTGGCACAGAGCCACTGCCCACGGCACGACCCGCCCCCCATCTCCACGTTCAGGAGCATCCCTGTAACTGGACAGTGGCACAGAGCCACTGCCCACGGCACGACCCGCCCTCCATCTCCACGTTCAGGAGCATCCCTGTAACTGGACAGTGGCACAGAGCCACTGCCCACGGCACGACCTGCCCTCCATCTCCACGTTCAGG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4930:HG3_PB_pbsv_8672:HG4_Ill_Krunchall_12755:HG2_PB_pbsv_8889:HG2_Ill_Krunchall_12460:HG4_Ill_GATKHCSBGrefine_6185:HG4_10X_allpass_1747:HG2_Ill_GATKHCSBGrefine_6091:HG2_10X_allpass_1487:HG4_PB_pbsv_8917:HG4_PB_SVrefine2PBcRDovetail_4411:HG4_PB_SVrefine2Falcon1Dovetail_5392:HG4_Ill_SVrefine2DISCOVARDovetail_6411:HG3_PB_SVrefine2Falcon1Dovetail_5417:HG3_Ill_SVrefine2DISCOVARDovetail_6617:HG2_PB_SVrefine2PBcRplusDovetail_10675:HG2_PB_SVrefine2PB10Xhap12_6496:HG2_PB_SVrefine2Falcon2Bionano_4338:HG2_PB_SVrefine2Falcon1plusDovetail_11475:HG2_Ill_SVrefine2DISCOVARplusDovetail_12543:HG2_10X_SVrefine210Xhap12_6349:HG2_Ill_tnscope_1028:HG4_Ill_MetaSV_5164;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6349:HG2_Ill_SVrefine2DISCOVARplusDovetail_12543:HG2_PB_SVrefine2Falcon1plusDovetail_11475:HG2_PB_SVrefine2Falcon2Bionano_4338:HG2_PB_SVrefine2PB10Xhap12_6496:HG2_PB_SVrefine2PBcRplusDovetail_10675:HG3_Ill_SVrefine2DISCOVARDovetail_6617:HG3_PB_SVrefine2Falcon1Dovetail_5417:HG4_Ill_SVrefine2DISCOVARDovetail_6411:HG4_PB_SVrefine2Falcon1Dovetail_5392:HG4_PB_SVrefine2PBcRDovetail_4411;NumExactMatchSVs=11;ClusterMaxShiftDist=0.140351;ClusterMaxSizeDiff=0.140351;ClusterMaxEditDist=0.140351;PBcalls=10;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-743;DistBack=-596;DistForward=-706;DistMin=-706;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=109;REFWIDENED=7:158046550-158047401;PctSeqSimilarity=0.9926;PctSizeSimilarity=1;PctRecOverlap=0.9772;SizeDiff=0;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=98;MatchId=3842.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:2:15:0:10:./.:0:0:0:0:1/1:0:40:0/1:4:13:1820:.:.
chr7	158245851	HG4_Ill_MetaSV_5169	GACAGTCCTCACCGTACGGTGCAGGGGGCACCACAGGGTTGGCTAACACAGCCTGGACGTAGGGGAATTGAAAGAGGACAGTCCTCACCGTACGGTGCAGGGGGCACCACAGGGTTGGCTAACACAGCCTGGACGTAGGGGAATTGAAAGAGGACAGTCCTCACCGTATGGTGCAGGGGGCACCACAGGGTTGGCTAACACAGCCTGGATGTAGGGGAATTGAAAGAGGACAGTCCTCACCGTACGGTGCAGGGGGCACCACAGGGTTGGCTAACACAGCCTGGACATAGGGGAATTGAAAGAGAA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_8913:HG4_Ill_Spiral_737:HG4_Ill_MetaSV_5169:HG2_10X_allpass_1490:HG4_PB_pbsv_8944;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_MetaSV_5169;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0163132;ClusterMaxSizeDiff=0.0163132;ClusterMaxEditDist=0.0195759;PBcalls=2;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=-305;DistBack=10949;DistForward=-269;DistMin=-269;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=152;REFWIDENED=7:158245736-158246192;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=0.9967;SizeDiff=1;StartDistance=0;EndDistance=1;GTMatch=0;TruScore=99;MatchId=3843.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:13:0|1:27:2:3:11:./.:0:0:0:0:0/1:27:13:./.:20:1:.:.:.
chr7	158256873	HG3_PB_pbsv_8704	GTAAATAATCCTTCATCATCACCATCATCATCCTTACCATCGCCATCATTGCCATGCCATTTA	G	10	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_25684:HG3_PB_pbsv_8704:HG4_PB_pbsv_8950:HG2_PB_assemblyticsPBcR_25044:HG4_PB_assemblyticsfalcon_25256:HG2_PB_pbsv_8918;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_8704;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0483871;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.188976;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-62;DistBack=-42;DistForward=-31;DistMin=-42;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1134;REFWIDENED=7:158256378-158257573;PctSeqSimilarity=0.9931;PctSizeSimilarity=0.9841;PctRecOverlap=0.6562;SizeDiff=-1;StartDistance=22;EndDistance=21;GTMatch=0;TruScore=87;MatchId=3844.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:25:0|1:33:5:5:24:./.:0:0:0:0:./.:7:0:./.:.:.:.:.:.
chr7	158285978	HG3_PB_SVrefine2Falcon1Dovetail_5439	CACACTCATACATGCATGCAGTCATGCCCATTCACAGGCACACTCATGCCTGCACACATACACACACGCACACCTGCATGCATACACACATGCACACACTCATACATGTGAGCATACACCTGCAGACACGTACACGTATGCACACACGTACATGGGTACACTCATGCATGCATGCAGTCATGCCCATTCACAGGCACACTCATGCCTGCACACATACACACACGCACACCTGCATGCATACACACATGCACACACTCATACATGTGAGCATACACCTGCAGACACGTACACGTATGCACACACGTACATGGGT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12553:HG3_10X_allpass_1787:HG2_PB_pbsv_8922:HG3_PB_pbsv_8707:HG2_10X_SVrefine210Xhap12_6361:HG3_PB_SVrefine2Falcon1Dovetail_5439:HG2_PB_SVrefine2Falcon2Bionano_4356;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12553:HG3_PB_SVrefine2Falcon1Dovetail_5439:HG2_PB_SVrefine2Falcon2Bionano_4356;NumExactMatchSVs=3;ClusterMaxShiftDist=0.100457;ClusterMaxSizeDiff=0.100457;ClusterMaxEditDist=0.100457;PBcalls=4;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-312;DistBack=-313;DistForward=-304;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=319;REFWIDENED=7:158285979-158286609;PctSeqSimilarity=0.9885;PctSizeSimilarity=0.9872;PctRecOverlap=0.3035;SizeDiff=4;StartDistance=-218;EndDistance=-214;GTMatch=0;TruScore=75;MatchId=3845.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:16:0|1:17:0:2:16:./.:0:0:0:0:0/1:15:3:0/0:9:1:.:.:.
chr7	158395077	HG4_Ill_250bpfermikitraw_12100	GCAGAGACCAGGCATCATCGCTAACCACTAAAGCAAAGAGGGCACTGCCAGCTGACAACCAAGAGGAACTATGGGAGTCTCCACCTGGAGCA	G	20	PASS	ClusterIDs=HG4_PB_HySA_13097:HG2_PB_SVrefine2Falcon1plusDovetail_11499:HG2_PB_assemblyticsfalcon_25854:HG4_PB_pbsv_8953:HG3_PB_pbsv_8716:HG4_PB_SVrefine2PBcRDovetail_4423:HG4_Ill_SVrefine2DISCOVARDovetail_6421:HG2_PB_assemblyticsPBcR_25054:HG2_PB_SVrefine2PBcRplusDovetail_10698:HG2_PB_SVrefine2PB10Xhap12_6530:HG2_PB_pbsv_8925:HG4_Ill_GATKHC_14588:HG4_Ill_GATKHCSBGrefine_6196:HG4_Ill_250bpfermikitraw_12100:HG3_Ill_Krunchall_12161:HG3_Ill_GATKHC_14513:HG3_Ill_GATKHCSBGrefine_6025:HG3_Ill_250bpfermikitraw_11805:HG2_Ill_Krunchall_12474:HG2_Ill_GATKHC_14540:HG2_Ill_GATKHCSBGrefine_6099:HG2_Ill_250bpfermikitraw_12145;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12145:HG2_Ill_GATKHCSBGrefine_6099:HG2_Ill_GATKHC_14540:HG2_Ill_Krunchall_12474:HG3_Ill_250bpfermikitraw_11805:HG3_Ill_GATKHCSBGrefine_6025:HG3_Ill_GATKHC_14513:HG3_Ill_Krunchall_12161:HG4_Ill_250bpfermikitraw_12100:HG4_Ill_GATKHCSBGrefine_6196:HG4_Ill_GATKHC_14588;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0552486;ClusterMaxSizeDiff=0.0552486;ClusterMaxEditDist=0.0782123;PBcalls=10;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-91;DistBack=739;DistForward=11443;DistMin=739;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=179;REFWIDENED=7:158395072-158395341;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3847.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:20:0|1:13:4:2:15:./.:0:0:0:0:0/1:25:15:./.:.:.:.:.:.
chr7	158589641	HG2_Ill_manta_2560	ACAGAGACAGGAAGGGGCACCACAGGCGAGAGGGCAGCAGGACAGCCTCCCGACAGACGGGAAAGGGCACTGCAGGCGAGAGGGCAGCAGGACAGCCTCCCGACAGAGACGGGAAAAGGCACCACGGCTGGAGGCAGAGCCTGAGTGA	G	20	PASS	ClusterIDs=HG3_PB_HySA_13534:HG4_Ill_GATKHC_14605:HG4_Ill_GATKHCSBGrefine_6206:HG3_Ill_GATKHC_14525:HG3_Ill_GATKHCSBGrefine_6032:HG2_Ill_GATKHC_14555:HG2_Ill_GATKHCSBGrefine_6106:HG4_PB_SVrefine2PBcRDovetail_4430:HG4_PB_SVrefine2Falcon1Dovetail_5429:HG4_Ill_manta_2202:HG4_Ill_SVrefine2DISCOVARDovetail_6429:HG3_PB_SVrefine2PBcRDovetail_4028:HG3_PB_SVrefine2Falcon1Dovetail_5450:HG3_Ill_manta_2094:HG3_Ill_SVrefine2DISCOVARDovetail_6636:HG2_PB_SVrefine2PBcRplusDovetail_10702:HG2_PB_SVrefine2PB10Xhap12_6540:HG2_PB_SVrefine2Falcon2Bionano_4363:HG2_PB_SVrefine2Falcon1plusDovetail_11505:HG2_PB_PB10Xdip_27103:HG2_Ill_manta_2560:HG2_Ill_SVrefine2DISCOVARplusDovetail_12563:HG2_10X_SVrefine210Xhap12_6373:HG2_Ill_SpiralSDKrefine_16522:HG4_PB_assemblyticsfalcon_25282:HG3_Ill_MetaSV_5113:HG2_Ill_MetaSV_4938:HG3_PB_pbsv_8725:HG4_PB_pbsv_8968:HG2_PB_pbsv_8936:HG4_Ill_svaba_11411:HG4_Ill_scalpel_8380:HG3_Ill_svaba_11401:HG3_Ill_scalpel_8724:HG3_Ill_250bpfermikitraw_11811:HG3_10X_allpass_1788:HG2_Ill_svaba_11288:HG2_Ill_scalpel_8605:HG2_10X_allpass_1494:HG4_PB_HySA_13110;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6373:HG2_Ill_SVrefine2DISCOVARplusDovetail_12563:HG2_Ill_manta_2560:HG2_PB_PB10Xdip_27103:HG2_PB_SVrefine2Falcon1plusDovetail_11505:HG2_PB_SVrefine2Falcon2Bionano_4363:HG2_PB_SVrefine2PB10Xhap12_6540:HG2_PB_SVrefine2PBcRplusDovetail_10702:HG3_Ill_SVrefine2DISCOVARDovetail_6636:HG3_Ill_manta_2094:HG3_PB_SVrefine2Falcon1Dovetail_5450:HG3_PB_SVrefine2PBcRDovetail_4028:HG4_Ill_SVrefine2DISCOVARDovetail_6429:HG4_Ill_manta_2202:HG4_PB_SVrefine2Falcon1Dovetail_5429:HG4_PB_SVrefine2PBcRDovetail_4430;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.0338983;PBcalls=15;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-147;DistBack=-14065;DistForward=-148;DistMin=-14065;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=248;REFWIDENED=7:158589393-158589787;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9932;PctRecOverlap=0.9865;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=3849.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:2:41:0:22:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr7	158852412	HG2_Ill_manta_2562	CACCACCCTCACCTCACCTAACCACCACTCTCAACTTATCTAACCCGTACTCACTTCAACT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6385:HG4_PB_HySA_13142:HG2_PB_pbsv_8954:HG2_PB_SVrefine2PB10Xhap12_6550:HG4_PB_HySA_13141:HG2_PB_HySA_16290:HG4_Ill_svaba_11415:HG4_Ill_scalpel_8385:HG4_Ill_manta_2203:HG4_Ill_Krunchall_12779:HG4_Ill_GATKHC_14613:HG4_Ill_GATKHCSBGrefine_6211:HG4_Ill_250bpfermikitraw_12118:HG4_Ill_150bpfermikitraw_11628:HG4_10X_allpass_1754:HG3_PB_assemblyticsfalcon_25732:HG2_Ill_svaba_11295:HG2_Ill_manta_2562:HG2_Ill_SpiralSDKrefine_16531:HG2_Ill_Krunchall_12492:HG2_Ill_GATKHC_14563:HG2_Ill_GATKHCSBGrefine_6110:HG2_Ill_250bpfermikitraw_12167:HG2_Ill_150bpfermikitraw_11432:HG2_Ill_breakscan11_1291:HG4_PB_pbsv_8982:HG4_PB_SVrefine2PBcRDovetail_4442:HG4_Ill_SVrefine2DISCOVARDovetail_6435;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11432:HG2_Ill_250bpfermikitraw_12167:HG2_Ill_GATKHCSBGrefine_6110:HG2_Ill_GATKHC_14563:HG2_Ill_Krunchall_12492:HG2_Ill_SpiralSDKrefine_16531:HG2_Ill_manta_2562:HG2_Ill_svaba_11295:HG3_PB_assemblyticsfalcon_25732:HG4_10X_allpass_1754:HG4_Ill_150bpfermikitraw_11628:HG4_Ill_250bpfermikitraw_12118:HG4_Ill_GATKHCSBGrefine_6211:HG4_Ill_GATKHC_14613:HG4_Ill_Krunchall_12779:HG4_Ill_manta_2203:HG4_Ill_scalpel_8385:HG4_Ill_svaba_11415;NumExactMatchSVs=18;ClusterMaxShiftDist=0.23622;ClusterMaxSizeDiff=0.23622;ClusterMaxEditDist=0.23622;PBcalls=8;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=1;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-60;DistBack=-1;DistForward=-34;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=7:158852409-158852499;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3851.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:32:./.:13:16:16:6:./.:0:0:0:0:0/1:33:18:./.:.:.:.:.:.
chr7	158879691	HG4_PB_SVrefine2Falcon1Dovetail_5439	CATAGTGAGATACGTCTTCCCAACCAACAATACCGAGGATCCTGATAGTGAGATATGGCTTCCCAACAAACAATAACCACACTCTGCCAGGACTCTGATAGTGAGATACGGCTTCCCAACAAATAATACCCAGGACTCGGATAGTGAGATATGGCTTCCCAACAAACAATACCCAGGACTCGGATAGTGAGATATGGCTTCCCCAACAAACAATACCCAGGACTCGGATAGTGAGATACGGCTTCCCAACAAACAATAACCACACTCTGCCAGGATTCTGATAGTGAGATACAGCTTCTCCAACAAACAATACCCAGGACTCTG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6387:HG2_PB_pbsv_8956:HG3_PB_pbsv_8743:HG4_PB_SVrefine2Falcon1Dovetail_5439:HG3_PB_SVrefine2PBcRDovetail_4039:HG2_PB_SVrefine2PB10Xhap12_6551:HG2_PB_SVrefine2Falcon1plusDovetail_11518:HG2_Ill_SVrefine2DISCOVARplusDovetail_12568;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6387:HG4_PB_SVrefine2Falcon1Dovetail_5439:HG3_PB_SVrefine2PBcRDovetail_4039:HG2_PB_SVrefine2PB10Xhap12_6551:HG2_PB_SVrefine2Falcon1plusDovetail_11518:HG2_Ill_SVrefine2DISCOVARplusDovetail_12568;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0123077;ClusterMaxSizeDiff=0.00615385;ClusterMaxEditDist=0.0615385;PBcalls=6;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=9257;DistForward=-264;DistMin=-264;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=637;REFWIDENED=7:158879692-158880651;PctSeqSimilarity=0.9545;PctSizeSimilarity=0.9878;PctRecOverlap=0.3933;SizeDiff=-4;StartDistance=-195;EndDistance=-199;GTMatch=0;TruScore=77;MatchId=3852.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:14:0|1:20:2:1:19:./.:0:0:0:0:0/0:42:0:0/0:30:1:.:760:.
chr7	158954886	HG2_Ill_SpiralSDKrefine_16538	AGCACATGATGTCGTCGTTCTTAGCTGGCGTGTGCTCACTGAATTAGGAGGCACACGATGTCGTTCTTAGCTGGCGTGTGCTCACTGAATTAGGAGGCACACGATGTCGTCGTTCTTAGCTGGCGTGTGCTCACTGAATTAGGAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_8971:HG4_PB_SVrefine2Falcon1Dovetail_5443:HG3_PB_SVrefine2PBcRDovetail_4045:HG3_Ill_SVrefine2DISCOVARDovetail_6643:HG2_PB_SVrefine2PB10Xhap12_6560:HG2_PB_SVrefine2Falcon1plusDovetail_11525:HG2_Ill_manta_2563:HG2_Ill_SVrefine2DISCOVARplusDovetail_12570:HG2_10X_SVrefine210Xhap12_6394:HG3_PB_assemblyticsfalcon_25743:HG3_PB_SVrefine2Falcon1Dovetail_5472:HG3_Ill_Krunchall_12179:HG2_Ill_Krunchall_12498:HG3_PB_pbsv_8754:HG3_Ill_svaba_11413:HG3_Ill_GATKHC_14544:HG3_Ill_GATKHCSBGrefine_6039:HG3_10X_allpass_1793:HG2_Ill_svaba_11302:HG2_Ill_SpiralSDKrefine_16538:HG2_Ill_GATKHC_14575:HG2_Ill_GATKHCSBGrefine_6115:HG2_10X_allpass_1495:HG3_Ill_Spiral_9530;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_1495:HG2_Ill_GATKHCSBGrefine_6115:HG2_Ill_GATKHC_14575:HG2_Ill_SpiralSDKrefine_16538:HG2_Ill_svaba_11302:HG3_10X_allpass_1793:HG3_Ill_GATKHCSBGrefine_6039:HG3_Ill_GATKHC_14544:HG3_Ill_svaba_11413:HG3_PB_pbsv_8754;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0479452;PBcalls=8;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-144;DistBack=-50;DistForward=-15;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=96;REFWIDENED=7:158954876-158955115;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3854.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:28:./.:21:9:10:14:./.:0:0:0:0:0/1:37:20:./.:.:.:.:.:.
chr8	1010291	HG3_Ill_250bpfermikitraw_11840	CCCCTCCCAAGGCGGGCTCCCTCTGGAGGCCCTGAGGGCGTTGGTCCCTCCGCTGAGTGCTTGTGGATAGATA	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11459:HG3_PB_assemblyticsfalcon_25791:HG2_PB_assemblyticsfalcon_25920:HG3_Ill_GATKHC_14572:HG3_Ill_GATKHCSBGrefine_6052:HG2_Ill_GATKHC_14603:HG2_Ill_GATKHCSBGrefine_6127:HG3_Ill_manta_2097:HG2_PB_PB10Xdip_30326:HG2_PB_PB10Xdip_30325:HG2_Ill_SpiralSDKrefine_16554:HG3_Ill_Spiral_9541:HG2_Ill_Spiral_628:HG3_PB_pbsv_8798:HG2_PB_pbsv_9009:HG3_Ill_svaba_11441:HG3_Ill_scalpel_8746:HG3_Ill_Krunchall_12192:HG3_Ill_250bpfermikitraw_11840:HG3_Ill_150bpfermikitraw_11521:HG2_Ill_svaba_11327:HG2_Ill_Krunchall_12507:HG2_Ill_250bpfermikitraw_12192;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11459:HG3_Ill_svaba_11441:HG3_Ill_scalpel_8746:HG3_Ill_Krunchall_12192:HG3_Ill_250bpfermikitraw_11840:HG3_Ill_150bpfermikitraw_11521:HG2_Ill_svaba_11327:HG2_Ill_Krunchall_12507:HG2_Ill_250bpfermikitraw_12192;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0413793;ClusterMaxSizeDiff=0.0413793;ClusterMaxEditDist=0.0555556;PBcalls=6;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-72;DistBack=948;DistForward=5755;DistMin=948;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=82;REFWIDENED=8:1010272-1010425;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.9861;PctRecOverlap=0.4521;SizeDiff=1;StartDistance=-40;EndDistance=-39;GTMatch=0;TruScore=81;MatchId=3858.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:0|1:33:1:1:32:./.:0:0:0:0:0/1:20:25:./.:.:.:.:.:.
chr8	1038834	HG2_PB_pbsv_9012	CATTCTCGCTCCCCCCACCCCACTCTCTCCACCCCTCATCCAGCAGGCTATG	C	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_25115:HG2_PB_pbsv_9012:HG4_PB_pbsv_9044:HG4_PB_assemblyticsfalcon_25346:HG3_PB_assemblyticsfalcon_25794:HG4_PB_assemblyticsfalcon_25345:HG3_PB_pbsv_8801;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_9012;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0917431;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.142857;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-51;DistBack=-7;DistForward=216;DistMin=-7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=507;REFWIDENED=8:1038646-1039203;PctSeqSimilarity=0.9895;PctSizeSimilarity=0.9623;PctRecOverlap=0.1481;SizeDiff=-2;StartDistance=46;EndDistance=44;GTMatch=0;TruScore=69;MatchId=3859.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:27:./.:8:23:22:6:./.:0:0:0:0:./.:5:0:./.:.:.:.:.:.
chr8	1040314	HG2_Ill_GATKHC_14604	ACCGAGGACCTGCTCCATGTCTGCCCTCTGGGGCCCTCCTGGCCAGGCAGGGGTGGAAACTCACACC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_8802:HG2_PB_assemblyticsPBcR_25116:HG2_PB_pbsv_9013:HG3_Ill_GATKHC_14573:HG3_Ill_GATKHCSBGrefine_6053:HG2_PB_assemblyticsfalcon_25924:HG2_Ill_SpiralSDKrefine_16555:HG2_Ill_GATKHC_14604:HG2_Ill_GATKHCSBGrefine_6128:HG2_Ill_150bpfermikitraw_11460:HG3_PB_assemblyticsfalcon_25795;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11460:HG2_Ill_GATKHCSBGrefine_6128:HG2_Ill_GATKHC_14604:HG2_Ill_SpiralSDKrefine_16555:HG2_PB_assemblyticsfalcon_25924:HG3_Ill_GATKHCSBGrefine_6053:HG3_Ill_GATKHC_14573;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.0916031;PBcalls=5;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=-67;DistForward=3607;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=396;REFWIDENED=8:1039970-1040431;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3860.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:22:0|1:25:3:4:23:./.:0:0:0:0:0/1:16:12:./.:.:.:.:.:.
chr8	1046503	HG2_PB_SVrefine2Falcon2Bionano_4394	GCTCTGTGGCATGGAGAGGACCCCTCCAGCGTGAGGCCCACCTCCCTGTGCTCAGGAGAGTCAAGCTGGGAGCCTAGGGCAGGCCTTCACCCTCTGTGGCATAGAGAGGACCCCTCCAGCGTGAGACCCACCTCCCTGCGCTCAGTAGAGTGGAGCTGGGAGCCCGGGGCAGGCCTTCACCCTCTGTGGCATAGAGAGGTCCCCTCCAGCGTGAGACCCAGCTCCCTGCGCTCAGTACAGTGGAGCTGGGAGCCCGGGGCAGGCCTTCACCCTCTGTGGCATGGAGAGGTCCCCTCCAGTGTGAGACCCAGCTCCCTGCGCTCAGTAGAGTGGAGCTGGGAGCCCGGGGCAGGCCTTCACCCTCTGTGGCATGGAGAGGTCTCCTCCAGCGTGAGACCCACCTCCCTGCGCTCAGTACAGTGGAGCTGGGAGCCCGGGGCAGGCCTTCACCCTCTGTGGCATAGAGAGGACCCCTCCAGCGTGAGACCCACCTCCCTGTGCTCAGGAGAGTCAAGCTGGGAGCCCGGGGCAGGCCTTCACCCTATGTGGCATGGAGAGGTCCCCTCCAGTGTGAGACCCACCTCCCTGTGCTCAGGAGAGTCAAGCTGGGAGCCCAGGGCAGGCCTTCACCCTCTGTGGCATGCAGAGGTCCCCTCCAGCGTGAGACCCAGCTCCCTCTGCTCAGGAGAGTCGAGCTGGGAGCCTAGGGCAGGCCTTCACCCTCTGTGGCATGGAGAGGTCCCCTCCAGCGTGAGACCCAGCTCCCTCTGCTCAGGAGAGTCCAGCTGGGAGCCCGGGGCAGGCCTTCACC	G	20	PASS	ClusterIDs=HG3_Ill_MetaSV_5127:HG2_Ill_MetaSV_4946:HG2_10X_allpass_1498:HG3_PB_pbsv_8803:HG2_PB_pbsv_9014:HG3_Ill_MetaSV_5128:HG4_PB_SVrefine2Falcon1Dovetail_5479:HG3_PB_SVrefine2Falcon1Dovetail_5505:HG2_PB_SVrefine2PB10Xhap12_6585:HG2_PB_SVrefine2Falcon2Bionano_4394:HG2_PB_SVrefine2Falcon1plusDovetail_11545;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11545:HG2_PB_SVrefine2Falcon2Bionano_4394:HG2_PB_SVrefine2PB10Xhap12_6585:HG3_PB_SVrefine2Falcon1Dovetail_5505:HG4_PB_SVrefine2Falcon1Dovetail_5479;NumExactMatchSVs=5;ClusterMaxShiftDist=0.233189;ClusterMaxSizeDiff=0.233189;ClusterMaxEditDist=0.245527;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=-810;DistBack=2473;DistForward=-212;DistMin=-212;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=623;REFWIDENED=8:1046504-1047936;PctSeqSimilarity=0.9652;PctSizeSimilarity=1;PctRecOverlap=0.275;SizeDiff=0;StartDistance=-588;EndDistance=-588;GTMatch=0;TruScore=74;MatchId=3861.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:42:13:0|1:34:0:4:23:./.:0:0:0:0:0/0:68:0:./.:79:7:.:.:.
chr8	1071684	HG2_Ill_scalpel_8630	CTCATCTTTCCTGAACCCATGACCACCCATCCTTGTCCCTTTAGAACCCACAACCACCCGTCT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11462:HG2_PB_pbsv_9019:HG4_PB_pbsv_9049:HG4_Ill_svaba_11445:HG4_Ill_manta_2207:HG4_Ill_Krunchall_12797:HG4_Ill_GATKHC_14665:HG4_Ill_GATKHCSBGrefine_6235:HG4_Ill_250bpfermikitraw_12142:HG4_Ill_150bpfermikitraw_11649:HG3_PB_assemblyticsfalcon_25805:HG2_PB_assemblyticsPBcR_25120:HG2_Ill_svaba_11329:HG2_Ill_scalpel_8630:HG2_Ill_manta_2567:HG2_Ill_SpiralSDKrefine_16557:HG2_Ill_Krunchall_12509:HG2_Ill_GATKHC_14606:HG2_Ill_GATKHCSBGrefine_6130:HG2_Ill_250bpfermikitraw_12196;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11462:HG4_Ill_svaba_11445:HG4_Ill_manta_2207:HG4_Ill_Krunchall_12797:HG4_Ill_GATKHC_14665:HG4_Ill_GATKHCSBGrefine_6235:HG4_Ill_250bpfermikitraw_12142:HG4_Ill_150bpfermikitraw_11649:HG3_PB_assemblyticsfalcon_25805:HG2_PB_assemblyticsPBcR_25120:HG2_Ill_svaba_11329:HG2_Ill_scalpel_8630:HG2_Ill_manta_2567:HG2_Ill_SpiralSDKrefine_16557:HG2_Ill_Krunchall_12509:HG2_Ill_GATKHC_14606:HG2_Ill_GATKHCSBGrefine_6130:HG2_Ill_250bpfermikitraw_12196;NumExactMatchSVs=18;ClusterMaxShiftDist=0.016129;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.0322581;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=4524;DistForward=1946;DistMin=1946;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=8:1071683-1071783;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3862.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:0|1:25:8:1:24:./.:0:0:0:0:0/1:23:15:./.:.:.:.:.:.
chr8	1224396	HG2_Ill_Krunchall_12517	TATAAACCATAAAATGAGTGACTTTGGATTTGTTTTAGAACATAAACCATAAAATGAGTGACTTTGGATTTATTTTAGAAC	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_12517:HG2_PB_pbsv_9031:HG4_PB_pbsv_9066:HG2_Ill_SpiralSDKrefine_16560;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_Krunchall_12517:HG2_Ill_SpiralSDKrefine_16560;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0124224;ClusterMaxSizeDiff=0.0124224;ClusterMaxEditDist=0.0125;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-80;DistBack=3601;DistForward=-34;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=200;REFWIDENED=8:1224392-1224671;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3864.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:./.:25:15:3:14:./.:0:0:0:0:0/1:13:13:./.:.:.:.:.:.
chr8	1390333	HG2_Ill_SpiralSDKrefine_16567	GAGGAGATGGATCCAGGCATAGACCTGCCAGGCTGCTGATGGGTTCAGCCACCGGGGGAGACGGACCCAGGCATAGACCCGCCAGGCTGCTGTGGGTTCAGCCACTGGAGA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_9054:HG3_Ill_GATKHC_14607:HG3_Ill_GATKHCSBGrefine_6066:HG3_10X_allpass_1801:HG2_Ill_SpiralSDKrefine_16567:HG2_Ill_GATKHC_14638:HG2_Ill_GATKHCSBGrefine_6139:HG3_PB_pbsv_8829:HG3_PB_SVrefine2PBcRDovetail_4058:HG3_PB_SVrefine2Falcon1Dovetail_5529:HG2_PB_SVrefine2PB10Xhap12_6607;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6139:HG2_Ill_GATKHC_14638:HG2_Ill_SpiralSDKrefine_16567:HG3_10X_allpass_1801:HG3_Ill_GATKHCSBGrefine_6066:HG3_Ill_GATKHC_14607;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00909091;ClusterMaxSizeDiff=0.00904977;ClusterMaxEditDist=0.0636364;PBcalls=5;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-110;DistBack=5120;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=199;REFWIDENED=8:1390279-1390587;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3865.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:25:0|1:21:2:1:29:./.:0:0:0:0:0/1:16:12:./.:.:.:.:.:.
chr8	1409177	HG2_PB_SVrefine2PBcRplusDovetail_10758	AGCTCTCACGTGGGCTGGGCACAGTCGCTGATTCAGTGGCCAGGAGGAGAGAGAAGGGCGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACGTGGGCTGGGTGCAGTCGCTGATTTCGTGGCCAGGAGGAGGGAGAAGGGCGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACAGGACTGGGTGCAGTCGCTGATTCGGTGGCCAGGAGGAGGGAGAAGGGTGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACAGGACTGGGTGCAGTCGCTGATTCGGTGGCCAGGAGGAGGGAGAAGGGTGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACGTGGGCTGGGTGCAGTCACTGATTTGGTGGCCAGGAGGAGGGAGAAGGGCGGCGTTCAGGTTGGGAGAAGGTGCTGCTGTCACAGGACTGGGTGCAGTCGCTGATTCGGTGACCAGGAGGAGGGAGAAGGGTGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACGTGGGCTGGGCACAGTCGCTGATTCGGTGGCCAGGAGGAGGGAGAAGGGTGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACGTGGGCTGGGTGCAGTCGCTGATTCGGTGGCCAGGAGGAGGGAGAAGGGCGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACAGGACTGGGTGCAGTCGCTGATTCGGTGACCAGGAGGAGGGAGAAGGGTGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACGTGGGCTGGGTGCAGTCACTGATTTGGTGGCCAGGAGGAGGGAGAAGGGCGGCGTTCAGGTTGGGAGAAGGTGCTGCTGTCACAGGACTGGGTGCAGTCGCTGATTCGGTGACCAGGAGGAGGGAGAAGGGTGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACGTGGGCTGGGCACAGTCGCTGATTCGGTGGCCAGGAGGAGGGAGAAGGGTGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACGTGGGCTGGGTGCAGTCGCTGATTTGGTGGCCAGGAGGAGGGAGAAGGGCGGCATTTGGGTTGGGAGAAGGTGCTGCTGTCACAGGACTGGGTGCAGTCGCTGATTCGATGACCAGGAGGAGGGAGAAGGGTGGCATTTGGGTTGGGAGAAGGTGCT	A	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_4485:HG2_10X_allpass_1500:HG2_Ill_breakscan11_1307:HG4_Ill_MetaSV_5195:HG3_Ill_MetaSV_5134:HG2_PB_pbsv_9058:HG3_PB_pbsv_8834:HG3_PB_SVrefine2PBcRDovetail_4061:HG4_PB_SVrefine2Falcon1Dovetail_5507:HG4_Ill_SVrefine2DISCOVARDovetail_6462:HG2_10X_SVrefine210Xhap12_6441:HG3_PB_SVrefine2Falcon1Dovetail_5534:HG3_Ill_SVrefine2DISCOVARDovetail_6662:HG2_PB_SVrefine2PBcRplusDovetail_10758:HG2_PB_SVrefine2PB10Xhap12_6610;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6610:HG2_PB_SVrefine2PBcRplusDovetail_10758:HG3_Ill_SVrefine2DISCOVARDovetail_6662:HG3_PB_SVrefine2Falcon1Dovetail_5534:HG4_PB_SVrefine2Falcon1Dovetail_5507;NumExactMatchSVs=5;ClusterMaxShiftDist=0.343215;ClusterMaxSizeDiff=0.343215;ClusterMaxEditDist=0.343215;PBcalls=8;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-1156;DistBack=-3120;DistForward=-944;DistMin=-3120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=427;REFWIDENED=8:1409178-1410760;PctSeqSimilarity=0.9449;PctSizeSimilarity=0.9948;PctRecOverlap=0.771;SizeDiff=6;StartDistance=-265;EndDistance=-259;GTMatch=0;TruScore=90;MatchId=3866.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:15:0|1:27:0:3:15:./.:0:0:0:0:0/0:27:0:0/1:47:24:.:1624:.
chr8	1509834	HG3_PB_SVrefine2PBcRDovetail_4065	CTGTGGTGTTGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTTCTGGGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCTGCACCTCGTTACTGGGGGACTGTGTGGTGTTGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGAGTTGGGGTGTCCGCGCCTCGTTGCTGCGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTGCTGCGGGACTGTGTGGTGTTGGGGTGTCGGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCTGCACCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCTGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGTGTCGGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTGCTGGGGGACTGTGTGGTGTTCGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGAGTTCGGGTGTCCGCGCCTCGTTGCTGCGGGACTGTGTGTTGTTGGGGTGTCGGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGTGTCCGTGCCTCGTTGCTGGTGGACTGTGTGGTGTTGGGTGTCCGCGCCTCGTTGCTCGGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTGCTGGGGGACTGTGTGGTGTTGGGGTGTCCGCGCCTCATTACTGGGGGGCTGTGTGGTGTTGGGGTGTCCGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGGTGTCTGCGCCTCGTTACTGGGGGACTGTGTGGTGTTGGGTGTCCGCGCCTCGTTACTGGGGGGCTG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6615:HG4_Ill_GATKHCSBGrefine_6255:HG2_PB_pbsv_9064:HG3_PB_pbsv_8842:HG4_PB_SVrefine2Falcon1Dovetail_5513:HG3_PB_SVrefine2PBcRDovetail_4065;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_4065:HG4_PB_SVrefine2Falcon1Dovetail_5513;NumExactMatchSVs=2;ClusterMaxShiftDist=0.274432;ClusterMaxSizeDiff=0.274432;ClusterMaxEditDist=0.274432;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-1151;DistBack=8202;DistForward=-1085;DistMin=-1085;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=766;REFWIDENED=8:1509835-1511751;PctSeqSimilarity=0.9638;PctSizeSimilarity=1;PctRecOverlap=0.5208;SizeDiff=0;StartDistance=-552;EndDistance=-552;GTMatch=0;TruScore=82;MatchId=3867.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:27:0|1:30:1:0:25:./.:0:0:0:0:0/0:15:0:0/1:39:18:1868:.:.
chr8	1711531	HG4_Ill_SVrefine2DISCOVARDovetail_6468	CCACCCCGCCGCCCCACAGCGCCCGCCGCGCCGCGCCCCGCCCCCCGCCGCGCCCCGCCCCCCGCCGCGCCCCGCCCCCCGCCGCGCCCCGCCCCCCGCCGCGCCCCGCCCCCCGCCGCGCCCCGCCCCCCGCCGCGCCCCGCCCCCCGCCG	C	20	PASS	ClusterIDs=HG3_PB_pbsv_8853:HG4_PB_pbsv_9111:HG2_PB_assemblyticsfalcon_25975:HG3_PB_assemblyticsfalcon_25870:HG4_PB_assemblyticsfalcon_25416:HG2_PB_SVrefine2Falcon1plusDovetail_11577:HG4_PB_SVrefine2Falcon1Dovetail_5518:HG3_PB_SVrefine2Falcon1Dovetail_5544:HG2_PB_pbsv_9075:HG4_PB_SVrefine2PBcRDovetail_4493:HG4_Ill_SVrefine2DISCOVARDovetail_6468:HG2_PB_SVrefine2PBcRplusDovetail_10766:HG2_Ill_SVrefine2DISCOVARplusDovetail_12594;NumClusterSVs=13;ExactMatchIDs=HG4_Ill_SVrefine2DISCOVARDovetail_6468:HG4_PB_SVrefine2PBcRDovetail_4493;NumExactMatchSVs=2;ClusterMaxShiftDist=0.296029;ClusterMaxSizeDiff=0.296029;ClusterMaxEditDist=0.31769;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-151;DistBack=-84;DistForward=-18;DistMin=-84;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=160;REFWIDENED=8:1711540-1711842;PctSeqSimilarity=0.931;PctSizeSimilarity=0.9801;PctRecOverlap=0.1382;SizeDiff=3;StartDistance=-131;EndDistance=-128;GTMatch=0;TruScore=68;MatchId=3868.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:38:0|1:28:8:1:32:./.:0:0:0:0:0/1:8:3:./.:.:.:.:.:.
chr8	1901243	HG2_PB_SVrefine2PB10Xhap12_6634	TTCCATCATTCCTTTCTGTGTTTTATATTGTGGAGAAGGAAGCCGGGATCTCCGTTGTTCCTTTGTGTGTTTTATATTGTGAAGAAGGAAGCCGGGATCTCCGTCATTCCTTTCTGTATTTTATGTTGTGAAGAAGGAAGCCGGGATC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6458:HG3_PB_assemblyticsfalcon_25886:HG2_PB_pbsv_9089:HG4_PB_SVrefine2PBcRDovetail_4498:HG3_PB_SVrefine2Falcon1Dovetail_5554:HG3_Ill_manta_2105:HG3_10X_allpass_1804:HG2_PB_SVrefine2PBcRplusDovetail_10778:HG2_PB_SVrefine2Falcon1plusDovetail_11589:HG3_PB_pbsv_8870:HG4_PB_pbsv_9118:HG4_PB_SVrefine2Falcon1Dovetail_5528:HG4_Ill_SVrefine2DISCOVARDovetail_6471:HG3_PB_SVrefine2PBcRDovetail_4079:HG3_PB_SVrefine2Falcon1Dovetail_5553:HG3_Ill_SVrefine2DISCOVARDovetail_6667:HG2_PB_SVrefine2PB10Xhap12_6634:HG2_PB_SVrefine2Falcon2Bionano_4430:HG2_Ill_SVrefine2DISCOVARplusDovetail_12598;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6458:HG4_PB_SVrefine2Falcon1Dovetail_5528:HG4_Ill_SVrefine2DISCOVARDovetail_6471:HG3_PB_SVrefine2PBcRDovetail_4079:HG3_PB_SVrefine2Falcon1Dovetail_5553:HG3_Ill_SVrefine2DISCOVARDovetail_6667:HG2_PB_SVrefine2PB10Xhap12_6634:HG2_PB_SVrefine2Falcon2Bionano_4430:HG2_Ill_SVrefine2DISCOVARplusDovetail_12598;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00680272;ClusterMaxSizeDiff=0.00677966;ClusterMaxEditDist=0.0745763;PBcalls=13;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-147;DistBack=1129;DistForward=44;DistMin=44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=193;REFWIDENED=8:1901244-1901583;PctSeqSimilarity=0.9528;PctSizeSimilarity=1;PctRecOverlap=0.2905;SizeDiff=0;StartDistance=-105;EndDistance=-105;GTMatch=0;TruScore=74;MatchId=3870.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:3:32:2:17:./.:0:0:0:0:./.:33:3:./.:.:.:.:.:.
chr8	2075436	HG2_PB_SVrefine2PBcRplusDovetail_10785	CCAGGCAGGCAGTACCTCGGCGTGACGCGGTGACGCAGCCGCAGGCAGGCAGTACCTCGGCGTGACGCGGTGACGCAGCCGCAGGCAGGCAGTACCTCGGCGTGACGCGGTGACGCAGCCGCAGGCAGGCAGTACCTCGGCGTGACGCGGTGACGCAGCCGCAGGCAGGCAGTACCTCGGCGTGACGCGGTGACGCAGCCG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12601:HG4_Ill_GATKHCSBGrefine_6274:HG2_Ill_GATKHCSBGrefine_6157:HG2_Ill_Spiral_630:HG4_PB_pbsv_9133:HG2_PB_pbsv_9103:HG2_10X_SVrefine210Xhap12_6463:HG4_PB_SVrefine2Falcon1Dovetail_5536:HG4_Ill_SVrefine2DISCOVARDovetail_6477:HG2_PB_SVrefine2PBcRplusDovetail_10785:HG2_PB_SVrefine2PB10Xhap12_6645;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12601:HG4_PB_SVrefine2Falcon1Dovetail_5536:HG4_Ill_SVrefine2DISCOVARDovetail_6477:HG2_PB_SVrefine2PBcRplusDovetail_10785:HG2_PB_SVrefine2PB10Xhap12_6645;NumExactMatchSVs=5;ClusterMaxShiftDist=0.211009;ClusterMaxSizeDiff=0.211009;ClusterMaxEditDist=0.211009;PBcalls=5;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-200;DistBack=-81;DistForward=-184;DistMin=-184;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=156;REFWIDENED=8:2075437-2075792;PctSeqSimilarity=0.9772;PctSizeSimilarity=0.975;PctRecOverlap=0.4478;SizeDiff=5;StartDistance=-111;EndDistance=-106;GTMatch=0;TruScore=79;MatchId=3872.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:./.:18:16:10:14:./.:0:0:0:0:./.:21:3:./.:.:.:.:.:.
chr8	2122082	HG3_Ill_SVrefine2DISCOVARDovetail_6673	TGGAAGACAGTGGCAGGTCATCAGGCATTAGTTAGTTTCTCATAAGGAGCGTACAGCCCAGATCGCTCGCACGCACAGTTCACAATAGGGTTCGAGCTCCCATGAGAATCTAATGCCGCCCCTGATCTGACAGGAGGTGGAGCTCAGGCGGTCATGTGAGCAGTGGGGAGCAGCTGTAAATACAGGTGAAGCTTCGTTGGCTCACTTGCTGGACTGCCACTCACCTCCTGCTGTGTGTCTGGGTTCCTAACAGGCCACGGCGCGG	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_12825:HG2_PB_assemblyticsfalcon_25991:HG2_PB_assemblyticsPBcR_25177:HG4_PB_assemblyticsfalcon_25439:HG3_PB_assemblyticsfalcon_25899:HG4_Ill_MetaSV_5204:HG2_PB_SVrefine2Falcon1plusDovetail_11598:HG4_PB_SVrefine2Falcon1Dovetail_5538:HG4_Ill_scalpel_8431:HG4_Ill_manta_2212:HG4_Ill_SVrefine2DISCOVARDovetail_6478:HG4_Ill_GATKHCSBGrefine_6275:HG4_10X_allpass_1764:HG3_PB_SVrefine2PBcRDovetail_4088:HG3_PB_SVrefine2Falcon1Dovetail_5564:HG3_Ill_manta_2106:HG3_Ill_SVrefine2DISCOVARDovetail_6673:HG3_Ill_GATKHCSBGrefine_6088:HG3_10X_allpass_1805:HG2_PB_pbsv_9105:HG2_PB_SVrefine2PBcRplusDovetail_10787:HG2_PB_SVrefine2PB10Xhap12_6647:HG2_Ill_scalpel_8659:HG2_Ill_manta_2575:HG2_Ill_breakscan11_1315:HG2_Ill_SpiralSDKrefine_16588:HG2_Ill_MetaSV_4962:HG2_Ill_GATKHCSBGrefine_6158:HG2_10X_allpass_1502:HG2_10X_SVrefine210Xhap12_6464:HG4_Ill_Krunchall_12826:HG2_Ill_Krunchall_12538:HG3_PB_pbsv_8885:HG4_PB_pbsv_9135;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6464:HG2_10X_allpass_1502:HG2_Ill_GATKHCSBGrefine_6158:HG2_Ill_MetaSV_4962:HG2_Ill_SpiralSDKrefine_16588:HG2_Ill_breakscan11_1315:HG2_Ill_manta_2575:HG2_Ill_scalpel_8659:HG2_PB_SVrefine2PB10Xhap12_6647:HG2_PB_SVrefine2PBcRplusDovetail_10787:HG2_PB_pbsv_9105:HG3_10X_allpass_1805:HG3_Ill_GATKHCSBGrefine_6088:HG3_Ill_SVrefine2DISCOVARDovetail_6673:HG3_Ill_manta_2106:HG3_PB_SVrefine2Falcon1Dovetail_5564:HG3_PB_SVrefine2PBcRDovetail_4088:HG4_10X_allpass_1764:HG4_Ill_GATKHCSBGrefine_6275:HG4_Ill_SVrefine2DISCOVARDovetail_6478:HG4_Ill_manta_2212:HG4_Ill_scalpel_8431:HG4_PB_SVrefine2Falcon1Dovetail_5538;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0301887;ClusterMaxSizeDiff=0.0113422;ClusterMaxEditDist=0.197343;PBcalls=13;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-264;DistBack=1377;DistForward=-265;DistMin=-265;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=8:2122083-2122348;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3873.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:0|1:29:0:0:35:./.:0:0:0:0:0/1:36:31:./.:.:.:.:.:.
chr8	2148345	HG2_Ill_GATKHCSBGrefine_6159	TGTGTGTGCATATGTATAGTTGTGTGTGTGCATGTGTATGTATGCGTGTGTGTACATATGTGCGCATATGTACTTGTGTGTGCATGC	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_5540:HG4_Ill_Krunchall_12831:HG3_Ill_Krunchall_12233:HG3_PB_pbsv_8887:HG2_PB_pbsv_9106:HG4_Ill_svaba_11505:HG4_Ill_manta_2213:HG4_Ill_Krunchall_12830:HG4_Ill_GATKHC_14737:HG4_Ill_GATKHCSBGrefine_6277:HG4_Ill_250bpfermikitraw_12191:HG4_Ill_150bpfermikitraw_11693:HG4_10X_allpass_1765:HG3_Ill_svaba_11504:HG3_Ill_manta_2107:HG3_Ill_Krunchall_12232:HG3_Ill_GATKHC_14649:HG3_Ill_GATKHCSBGrefine_6089:HG3_Ill_250bpfermikitraw_11885:HG3_Ill_150bpfermikitraw_11557:HG3_10X_allpass_1806:HG2_Ill_svaba_11395:HG2_Ill_scalpel_8662:HG2_Ill_manta_2576:HG2_Ill_SpiralSDKrefine_16590:HG2_Ill_Krunchall_12541:HG2_Ill_GATKHC_14679:HG2_Ill_GATKHCSBGrefine_6159:HG2_Ill_250bpfermikitraw_12233:HG2_Ill_150bpfermikitraw_11498:HG2_10X_allpass_1503:HG4_PB_pbsv_9138;NumClusterSVs=32;ExactMatchIDs=HG2_10X_allpass_1503:HG2_Ill_150bpfermikitraw_11498:HG2_Ill_250bpfermikitraw_12233:HG2_Ill_GATKHCSBGrefine_6159:HG2_Ill_GATKHC_14679:HG2_Ill_Krunchall_12541:HG2_Ill_SpiralSDKrefine_16590:HG2_Ill_manta_2576:HG2_Ill_scalpel_8662:HG2_Ill_svaba_11395:HG3_10X_allpass_1806:HG3_Ill_150bpfermikitraw_11557:HG3_Ill_250bpfermikitraw_11885:HG3_Ill_GATKHCSBGrefine_6089:HG3_Ill_GATKHC_14649:HG3_Ill_Krunchall_12232:HG3_Ill_manta_2107:HG3_Ill_svaba_11504:HG4_10X_allpass_1765:HG4_Ill_150bpfermikitraw_11693:HG4_Ill_250bpfermikitraw_12191:HG4_Ill_GATKHCSBGrefine_6277:HG4_Ill_GATKHC_14737:HG4_Ill_Krunchall_12830:HG4_Ill_manta_2213:HG4_Ill_svaba_11505;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0352941;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0823529;PBcalls=4;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-86;DistBack=2360;DistForward=-69;DistMin=-69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=92;REFWIDENED=8:2148337-2148514;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3874.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:4:16:0:15:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr8	2364500	HG4_Ill_SVrefine2DISCOVARDovetail_6481	ACTTCTCTGCAGAAGCTTCCAATTCCTTATCCCGCCTGTCTGCAGGGTTCTCACTGCCGTTCCTGCCTGACAAACTCCTACTTATTCAATACCTCCCAGCTCACACTCAG	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1317:HG4_Ill_Krunchall_12835:HG2_PB_pbsv_9113:HG4_PB_assemblyticsfalcon_25448:HG4_PB_SVrefine2Falcon1Dovetail_5543:HG4_Ill_svaba_11512:HG4_Ill_SVrefine2DISCOVARDovetail_6481:HG4_Ill_GATKHC_14744:HG4_Ill_GATKHCSBGrefine_6281:HG4_Ill_250bpfermikitraw_12196:HG4_Ill_150bpfermikitraw_11698:HG3_Ill_svaba_11511:HG3_Ill_GATKHCSBGrefine_6095:HG2_PB_assemblyticsPBcR_25185:HG2_Ill_svaba_11402:HG2_Ill_SpiralSDKrefine_16592:HG2_Ill_GATKHC_14683:HG2_Ill_GATKHCSBGrefine_6161:HG2_10X_allpass_1504:HG2_10X_SVrefine210Xhap12_6466:HG4_Ill_Spiral_743:HG4_PB_pbsv_9148;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6466:HG2_10X_allpass_1504:HG2_Ill_GATKHCSBGrefine_6161:HG2_Ill_GATKHC_14683:HG2_Ill_SpiralSDKrefine_16592:HG2_Ill_svaba_11402:HG2_PB_assemblyticsPBcR_25185:HG3_Ill_GATKHCSBGrefine_6095:HG3_Ill_svaba_11511:HG4_Ill_150bpfermikitraw_11698:HG4_Ill_250bpfermikitraw_12196:HG4_Ill_GATKHCSBGrefine_6281:HG4_Ill_GATKHC_14744:HG4_Ill_SVrefine2DISCOVARDovetail_6481:HG4_Ill_svaba_11512:HG4_PB_SVrefine2Falcon1Dovetail_5543:HG4_PB_assemblyticsfalcon_25448;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0181818;ClusterMaxSizeDiff=0.0181818;ClusterMaxEditDist=0.0363636;PBcalls=5;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-109;DistBack=8;DistForward=10128;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=110;REFWIDENED=8:2364423-2364641;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3875.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:36:1|0:3:33:44:1:./.:0:0:0:0:0/1:13:26:./.:.:.:.:.:.
chr8	2739787	HG4_Ill_GATKHCSBGrefine_6284	AGATTAAGGGGTACTCAGATCGTTCATTCTGCAGGATGTGGTGGCTGGTTTTGATGGGATTAAGGGGTACTCAGATCGTTCATTCTGCAGGATGTGGTGGCTGGTTTTGATGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6469:HG2_10X_SVrefine210Xhap12_6470:HG2_PB_HySA_16360:HG4_Ill_GATKHC_14750:HG4_Ill_GATKHCSBGrefine_6285:HG4_PB_pbsv_9154:HG2_PB_pbsv_9117:HG3_PB_pbsv_8900:HG4_PB_assemblyticsfalcon_25451:HG3_PB_assemblyticsfalcon_25910:HG4_PB_SVrefine2Falcon1Dovetail_5546:HG4_Ill_GATKHCSBGrefine_6284:HG3_PB_SVrefine2PBcRDovetail_4095:HG3_PB_SVrefine2Falcon1Dovetail_5572:HG3_Ill_SVrefine2DISCOVARDovetail_6681:HG3_Ill_GATKHCSBGrefine_6099:HG3_Ill_250bpfermikitraw_11893:HG3_Ill_150bpfermikitraw_11565:HG2_Ill_SVrefine2DISCOVARplusDovetail_12608:HG2_Ill_GATKHCSBGrefine_6163:HG4_PB_SVrefine2PBcRDovetail_4507:HG4_Ill_SVrefine2DISCOVARDovetail_6485:HG2_PB_SVrefine2PBcRplusDovetail_10792:HG2_PB_SVrefine2PB10Xhap12_6658:HG2_PB_SVrefine2Falcon2Bionano_4443:HG2_PB_SVrefine2Falcon1plusDovetail_11603;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6163:HG2_Ill_SVrefine2DISCOVARplusDovetail_12608:HG3_Ill_150bpfermikitraw_11565:HG3_Ill_250bpfermikitraw_11893:HG3_Ill_GATKHCSBGrefine_6099:HG3_Ill_SVrefine2DISCOVARDovetail_6681:HG3_PB_SVrefine2Falcon1Dovetail_5572:HG3_PB_SVrefine2PBcRDovetail_4095:HG4_Ill_GATKHCSBGrefine_6284:HG4_PB_SVrefine2Falcon1Dovetail_5546;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0973451;ClusterMaxSizeDiff=0.0973451;ClusterMaxEditDist=0.142222;PBcalls=14;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-112;DistBack=12905;DistForward=-113;DistMin=-113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=278;REFWIDENED=8:2739753-2740142;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3876.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:65:1/1:2:36:3:25:./.:0:0:0:0:1/1:0:11:./.:.:.:.:.:.
chr8	2992912	HG2_Ill_SVrefine2DISCOVARplusDovetail_12613	GGAACTGGCTTCTTCCCCTTTAAAACATGCTCTTGAGTGAAGTCTGCTGATCACATTTCTGACTCTGT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12613:HG4_PB_pbsv_9156:HG3_PB_pbsv_8903:HG2_PB_pbsv_9119:HG3_PB_HySA_13619:HG3_Ill_250bpfermikitraw_11897:HG4_PB_SVrefine2PBcRDovetail_4509:HG4_PB_SVrefine2Falcon1Dovetail_5549:HG3_PB_SVrefine2PBcRDovetail_4097:HG3_PB_SVrefine2Falcon1Dovetail_5575:HG3_Ill_SVrefine2DISCOVARDovetail_6683:HG2_PB_SVrefine2PB10Xhap12_6661;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12613:HG4_PB_SVrefine2PBcRDovetail_4509:HG4_PB_SVrefine2Falcon1Dovetail_5549:HG3_PB_SVrefine2PBcRDovetail_4097:HG3_PB_SVrefine2Falcon1Dovetail_5575:HG3_Ill_SVrefine2DISCOVARDovetail_6683:HG2_PB_SVrefine2PB10Xhap12_6661;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0597015;ClusterMaxEditDist=0.10687;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-67;DistBack=51741;DistForward=-68;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=270;REFWIDENED=8:2992913-2993249;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.9265;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=97;MatchId=3877.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:21:0|1:26:3:0:17:./.:0:0:0:0:0/0:13:1:./.:.:.:.:.:.
chr8	3581486	HG2_PB_SVrefine2Falcon2Bionano_4452	AATGTTGTGTGAAAGAAAAATGTCCACTATTATCTAAGAGGGATATTAAAATACGCCTCTCTTTTTCAACTTTCTATCTGTGTAAACACAGATTTTGTTCATTGACTTCAACCAGAATAACAGAGCACAGCACATTAAATACGAAAGCAGATATGAGAAACCAGCCTCTTTCACCATGCCAGACGTTAAA	TTGC	20	PASS	ClusterIDs=HG2_PB_pbsv_9133:HG2_PB_PB10Xdip_29934:HG2_PB_PB10Xdip_29935:HG4_Ill_manta_2218:HG2_Ill_manta_2582:HG4_Ill_Spiral_745:HG2_Ill_Spiral_633:HG2_PB_SVrefine2PBcRplusDovetail_10800:HG2_PB_SVrefine2PB10Xhap12_6670:HG2_PB_SVrefine2Falcon2Bionano_4452:HG2_Ill_SVrefine2DISCOVARplusDovetail_12621:HG2_10X_SVrefine210Xhap12_6479:HG2_PB_assemblyticsPBcR_25215:HG4_PB_pbsv_9167:HG2_PB_HySA_16393:HG4_Ill_Krunchall_12856:HG2_Ill_Krunchall_12569:HG2_10X_allpass_1506;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6479:HG2_Ill_SVrefine2DISCOVARplusDovetail_12621:HG2_PB_SVrefine2Falcon2Bionano_4452:HG2_PB_SVrefine2PB10Xhap12_6670:HG2_PB_SVrefine2PBcRplusDovetail_10800;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0911392;ClusterMaxSizeDiff=0.0911392;ClusterMaxEditDist=0.0911392;PBcalls=9;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-186;DistBack=3343;DistForward=-184;DistMin=-184;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:3581486-3581675;PctSeqSimilarity=0.9894;PctSizeSimilarity=0.9946;PctRecOverlap=0.9789;SizeDiff=1;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=98;MatchId=3878.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:31:0|1:27:5:4:23:./.:0:0:0:0:0/1:45:13:./.:.:.:.:.:.
chr8	3629974	HG2_Ill_manta_2583	TATATATACATATATACACATATATATACATATATACACATATATACATATATACAC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11525:HG2_PB_HySA_16396:HG4_Ill_svaba_11535:HG4_Ill_Krunchall_12857:HG4_Ill_GATKHC_14776:HG4_Ill_GATKHCSBGrefine_6295:HG2_Ill_svaba_11425:HG2_Ill_Krunchall_12570:HG2_Ill_GATKHC_14711:HG2_Ill_GATKHCSBGrefine_6174:HG2_Ill_250bpfermikitraw_12260:HG2_Ill_150bpfermikitraw_11526:HG3_PB_HySA_13645:HG3_Ill_svaba_11534:HG3_Ill_Krunchall_12259:HG3_Ill_GATKHC_14686:HG3_Ill_GATKHCSBGrefine_6109:HG3_Ill_250bpfermikitraw_11918:HG3_Ill_150bpfermikitraw_11584:HG2_Ill_svaba_11424:HG2_Ill_manta_2583:HG2_Ill_GATKHC_14710:HG2_Ill_GATKHCSBGrefine_6173:HG2_Ill_250bpfermikitraw_12259;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11525:HG3_Ill_svaba_11534:HG3_Ill_Krunchall_12259:HG3_Ill_GATKHC_14686:HG3_Ill_GATKHCSBGrefine_6109:HG3_Ill_250bpfermikitraw_11918:HG3_Ill_150bpfermikitraw_11584:HG2_Ill_svaba_11424:HG2_Ill_manta_2583:HG2_Ill_GATKHC_14710:HG2_Ill_GATKHCSBGrefine_6173:HG2_Ill_250bpfermikitraw_12259;NumExactMatchSVs=12;ClusterMaxShiftDist=0.119658;ClusterMaxSizeDiff=0.119658;ClusterMaxEditDist=0.135593;PBcalls=2;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-56;DistBack=87;DistForward=-52;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=25;REFWIDENED=8:3629973-3630056;PctSeqSimilarity=0.9855;PctSizeSimilarity=0.9643;PctRecOverlap=0.6491;SizeDiff=2;StartDistance=-20;EndDistance=-18;GTMatch=0;TruScore=86;MatchId=3879.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:31:./.:5:15:5:21:./.:0:0:0:0:./.:3:37:./.:.:.:.:.:.
chr8	3974033	HG3_Ill_250bpfermikitraw_11926	CGATGTATGAGTGCAGGTACCTGGATGGAACAAACGCGCCATGAATGAACCCTAACGTAAGCTGTACACATCCGACAGT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_8922:HG2_PB_pbsv_9137:HG3_Ill_GATKHC_14693:HG3_Ill_250bpfermikitraw_11926:HG2_Ill_250bpfermikitraw_12272;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12272:HG3_Ill_250bpfermikitraw_11926:HG3_Ill_GATKHC_14693;NumExactMatchSVs=3;ClusterMaxShiftDist=0.025974;ClusterMaxSizeDiff=0.025641;ClusterMaxEditDist=0.0779221;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=37567;DistForward=14138;DistMin=14138;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=239;REFWIDENED=8:3973915-3974231;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3880.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:23:./.:35:1:9:22:./.:0:0:0:0:0/1:4:14:./.:.:.:.:.:.
chr8	3994880	HG2_PB_SVrefine2PB10Xhap12_6675	ATGCAAACTTCTTATGCTAAATAGATTAATGAAGAACAGAAAACAAAAGTTATCGCTTGTGTTTAATAATGAAATTAAATATATTGTCAAAATAGAGAGTATTTTAAAAGGTAATTTTCACTACAGAATATAACATTGTTTTTCCTTTTAAAAATATTATGGTAGTGTTTAATATTCCATTTGTATTATGTTTTCTTTGATGGTTACAAGATTTGATGTTAATGGAACTGGTTGGTTTGTAAGATACAAAAAAGACAACTGTTAATTGATCACATTTTTATAAGCAGTTTCAATATAAATTCATACTGAAAGTAACTTCTTATATAGCTGTAAGACAAGAGATCACATCGATAAAGATACTGTATTTCACGATGTTGTATTTTATATAAAATTACACTTTCCTAAATTTCTCAAGGAAAATCTAAGCCTTATAATCCAAATTAATTTTCCCCTTACAT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6674:HG3_10X_allpass_1812:HG2_10X_allpass_1507:HG4_10X_allpass_1769:HG4_PB_HySA_13224:HG2_Ill_tnscope_1031:HG2_Ill_MetaSV_4969:HG4_PB_SVrefine2PBcRDovetail_4515:HG4_PB_SVrefine2Falcon1Dovetail_5559:HG4_Ill_manta_2220:HG4_Ill_SVrefine2DISCOVARDovetail_6493:HG4_Ill_Krunchall_12865:HG4_Ill_GATKHCSBGrefine_6299:HG3_Ill_manta_2113:HG3_Ill_Krunchall_12268:HG2_PB_pbsv_9138:HG2_PB_assemblyticsfalcon_26036:HG2_PB_SVrefine2PBcRplusDovetail_10803:HG2_PB_SVrefine2PB10Xhap12_6675:HG2_PB_SVrefine2Falcon2Bionano_4455:HG2_PB_SVrefine2Falcon1plusDovetail_11614:HG2_Ill_manta_2585:HG2_Ill_SpiralSDKrefine_16617:HG2_Ill_SVrefine2DISCOVARplusDovetail_12622:HG2_PB_PB10Xdip_29942:HG2_PB_PB10Xdip_29943:HG4_PB_assemblyticsfalcon_25481:HG3_PB_pbsv_8923:HG2_PB_assemblyticsPBcR_25225:HG4_PB_pbsv_9171:HG3_PB_SVrefine2PBcRDovetail_4106;NumClusterSVs=31;ExactMatchIDs=HG2_PB_PB10Xdip_29943:HG2_Ill_SVrefine2DISCOVARplusDovetail_12622:HG2_Ill_SpiralSDKrefine_16617:HG2_Ill_manta_2585:HG2_PB_SVrefine2Falcon1plusDovetail_11614:HG2_PB_SVrefine2Falcon2Bionano_4455:HG2_PB_SVrefine2PB10Xhap12_6675:HG2_PB_SVrefine2PBcRplusDovetail_10803:HG2_PB_assemblyticsfalcon_26036:HG2_PB_pbsv_9138:HG3_Ill_Krunchall_12268:HG3_Ill_manta_2113:HG4_Ill_GATKHCSBGrefine_6299:HG4_Ill_Krunchall_12865:HG4_Ill_SVrefine2DISCOVARDovetail_6493:HG4_Ill_manta_2220:HG4_PB_SVrefine2Falcon1Dovetail_5559:HG4_PB_SVrefine2PBcRDovetail_4515;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0836735;ClusterMaxSizeDiff=0.0836735;ClusterMaxEditDist=0.0836735;PBcalls=17;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=5;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-457;DistBack=1972;DistForward=-457;DistMin=-457;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:3994881-3995338;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3881.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:25:0|1:25:2:3:26:./.:0:0:0:0:0/1:43:10:0/1:38:11:.:.:.
chr8	4122885	HG2_PB_assemblyticsfalcon_26043	ATCATTTGACATGTTACAATTAGTAAACAGTTAATGCACCATATTCAGAGTTCTTCAAAGCCAGTTGAAAAAGTGTCCTCTAACTTAATTTGACCTCGACTGTTATTGGTAAAAATAAATATTGGAACCTGTTTCAAAAATAGCAAAATTTAATAGTACAATTTAAAAATTATTTATTTACAAATTCTATTCATATACTCCTATGTTTTATGCTATATTTTATGGAATACAAAACAAGGATAATTATTAAAAATAATGAGATTAAAAACAAATATATTAGGGAAAAATTCTGTCAGCATTTTGATAAATGATCTGGCTCTGAACAGTATTATTTGACATGTTACGATTAGGAAACAGTTAATGCAACATAAAATGTTTGAAAACTTTAAATAGAGCAAGTCAGTGCTCAAGTTTCCCTAATGTGATGTTGACTTTTATAAACTCTCACCATTTACCTATCAACTTGGTTACCCTAAAAGCCAGCTATTTCTATAGGTCCATGGTGTCCCCACAGATAAAGATTCCCACACAAATCCAAAATAAAATGTGAAGAAATAGATTTCCCCCCATTGCCCAGGAGACGGGGAACCATGGCCCCCACTGTATTCCATGCCTACTTTGTGTGCGTTTGGGCTGTGTAAGTCATCCCAAACCGGCCCACCGCACTCAGGCTCGCCCGGCATATTAGCTGATACTGATCACCTGCCCACCGCACATAGACTCACCAGGCATATTAGCTGATATTGATCATTTGGAACTGACTTAAAACCACCTTTTTACTTCAGCTACTCATCTACCACCAAAAACCCAGTGTTATTCACCAAGTTGGAGGTTTTTTACGTTATTTTTTCTAAGTGGAATGGTAACACATTTCCATACAACTCATTTAAAAATTTAATACCAAAGAAAATTTTATAAATTTTTGTTTTCTATGTAAGAGAAACTGTCCAGGTCTTAGAAACAGTTGATTTTGGAGAAAAACAAACACAACTTTTTAATATTTTCAAGAATATATTTGAAAATATTAATATAGTTCATTTTATGTGTAATAATGTGATTTCATTATAATATGTTAGGTTATATTGATGATTGGTTAGATAGAAGCCAAGGATAAAATTTATAACTCTGTCAAAGTATTCACTAAATTTTAAAAAGTAGAACAATTTCATACTCATGCCTCATATCCTTCCTTCAGAAAAACAATTTTAAACAAGTACACCATACAGGTATGTCCCCACTAATGGCGTAAAGTGACCTGTCCTGCAGTTGAACATTTTTATTTGTCATCTATGAACATTGATATAACTTGAAAAATACATTATCAAAGAATTATACTTAGTTTTATACATTATACAAAAATTCTAATTTTTTGTCTAATAAAAATTTGATGATCTATAAATCCTCAAAATAGTAGCACAGAGAATCTAGATGAAAACTTAAATAGTGGATTGTGATGACTTTTCATTTACTGCAAAAATAAAAATATGATTCAATATTTGAAAACATATTAATTCAACGTGTTAAGATGGAAGAAGAAACAAACTGATTAATAAAAACCAAATGACATTTAGTAAAATATCTATTATTGAATAAAATTAACAATTTTGGAACTTAAGAAGATAAAAATCACTTTTGTGATTTTTACAAAACAAAAGCATAAAACCTAGTAATGTAACAGAAACCATTCCTGTTAAAGAGACAAGAATAGAGTGTCTGTTTACTTCAATGTTATTTTTTTTTGAAAGTGCTTTCTAATGCAATTAGTTGGGAGAATTAAATAAGTATAATTATTTGAAACAGTGAAGATAATATTCATTAATTCCAAAAAATGCACAACAAAAGAATCCATTAACAACAGTTATTAAAGAAAAGTGAGTTCAATGAAGTTGCTACTTAGAAAATATATCATGTTTTAATATGTATTAGCTATAACCATTTAGAAAATATAATTTAAAAATTATAAAATAGCAATTAGGATGAAAAAGTAACAATAAGAGTTTAAAAGGGAGTCTTAGGATTAACTATGAACTCTGAAAGATCTATGTGAAGAAAATGATAAGCTTCTACAGCAGAGTAAAAATAGTTTAA	TACATAATAATAT	20	PASS	ClusterIDs=HG4_PB_pbsv_9175:HG4_Ill_GATKHCSBGrefine_6301:HG2_Ill_SpiralSDKrefine_16621:HG2_Ill_tnscope_1032:HG4_PB_assemblyticsfalcon_25484:HG4_PB_SVrefine2PBcRDovetail_4517:HG4_PB_SVrefine2Falcon1Dovetail_5561:HG4_Ill_SVrefine2DISCOVARDovetail_6494:HG3_PB_SVrefine2PBcRDovetail_4109:HG3_PB_SVrefine2Falcon1Dovetail_5585:HG3_Ill_SVrefine2DISCOVARDovetail_6692:HG2_PB_assemblyticsfalcon_26043:HG2_PB_SVrefine2PBcRplusDovetail_10807:HG2_PB_SVrefine2PB10Xhap12_6678:HG2_PB_SVrefine2Falcon2Bionano_4458:HG2_PB_SVrefine2Falcon1plusDovetail_11618:HG2_PB_PB10Xdip_29950:HG2_10X_SVrefine210Xhap12_6480:HG2_10X_allpass_1508:HG3_PB_pbsv_8927:HG4_Ill_MetaSV_5210:HG4_10X_allpass_1770:HG3_Ill_MetaSV_5150:HG3_10X_allpass_1813:HG2_Ill_MetaSV_4970:HG3_PB_assemblyticsfalcon_25943:HG2_PB_assemblyticsPBcR_25230:HG4_Ill_Krunchall_12867:HG3_Ill_Krunchall_12272:HG2_Ill_Krunchall_12585:HG2_PB_pbsv_9142;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6480:HG2_PB_PB10Xdip_29950:HG2_PB_SVrefine2Falcon1plusDovetail_11618:HG2_PB_SVrefine2Falcon2Bionano_4458:HG2_PB_SVrefine2PB10Xhap12_6678:HG2_PB_SVrefine2PBcRplusDovetail_10807:HG2_PB_assemblyticsfalcon_26043:HG3_Ill_SVrefine2DISCOVARDovetail_6692:HG3_PB_SVrefine2Falcon1Dovetail_5585:HG3_PB_SVrefine2PBcRDovetail_4109:HG4_Ill_SVrefine2DISCOVARDovetail_6494:HG4_PB_SVrefine2Falcon1Dovetail_5561:HG4_PB_SVrefine2PBcRDovetail_4517:HG4_PB_assemblyticsfalcon_25484;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0606359;ClusterMaxSizeDiff=0.0606359;ClusterMaxEditDist=0.0606359;PBcalls=16;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2075;DistBack=-2088;DistForward=-2084;DistMin=-2088;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:4122885-4124972;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.999;PctRecOverlap=0.9933;SizeDiff=2;StartDistance=-4;EndDistance=10;GTMatch=0;TruScore=98;MatchId=3882.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:48:./.:19:6:15:14:./.:0:0:0:0:0/1:59:17:0/1:148:61:.:.:.
chr8	4222049	HG3_PB_SVrefine2PBcRDovetail_4110	TAAAAAGATAATCAATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGCGCGACAGAGCGAGACTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_634:HG2_10X_allpass_1509:HG2_PB_SVrefine2PBcRplusDovetail_10808:HG2_PB_assemblyticsPBcR_25232:HG3_PB_assemblyticsfalcon_25946:HG3_Ill_Krunchall_12278:HG2_PB_assemblyticsfalcon_26045:HG3_Ill_Krunchall_12277:HG2_Ill_Krunchall_12587:HG3_PB_HySA_13664:HG2_PB_pbsv_9143:HG3_PB_pbsv_8928:HG3_Ill_MetaSV_5151:HG2_Ill_tnscope_1033:HG2_Ill_MetaSV_4971:HG4_PB_SVrefine2Falcon1Dovetail_5562:HG3_PB_SVrefine2PBcRDovetail_4110:HG3_PB_SVrefine2Falcon1Dovetail_5586:HG3_Ill_manta_2114:HG3_Ill_SVrefine2DISCOVARDovetail_6693:HG3_Ill_GATKHCSBGrefine_6118:HG3_10X_allpass_1814:HG2_PB_SVrefine2PB10Xhap12_6680:HG2_PB_SVrefine2Falcon1plusDovetail_11619:HG2_Ill_manta_2586:HG2_Ill_GATKHCSBGrefine_6182:HG2_10X_SVrefine210Xhap12_6481:HG3_Ill_Spiral_9601;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6481:HG2_Ill_GATKHCSBGrefine_6182:HG2_Ill_manta_2586:HG2_PB_SVrefine2Falcon1plusDovetail_11619:HG2_PB_SVrefine2PB10Xhap12_6680:HG3_10X_allpass_1814:HG3_Ill_GATKHCSBGrefine_6118:HG3_Ill_SVrefine2DISCOVARDovetail_6693:HG3_Ill_manta_2114:HG3_PB_SVrefine2Falcon1Dovetail_5586:HG3_PB_SVrefine2PBcRDovetail_4110:HG4_PB_SVrefine2Falcon1Dovetail_5562;NumExactMatchSVs=12;ClusterMaxShiftDist=0.227886;ClusterMaxSizeDiff=0.227886;ClusterMaxEditDist=0.227886;PBcalls=12;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=13;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-340;DistBack=-197;DistForward=-141;DistMin=-197;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:4222050-4222404;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3883.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:31:0|1:36:3:1:33:./.:0:0:0:0:0/1:23:18:0/1:17:7:.:.:.
chr8	4343644	HG4_Ill_SVrefine2DISCOVARDovetail_6497	CATATATATATATATACATACATATATATATATATACATACATATATATATATACATACATATATATATATATATATACATACATATATATATATATATATATACATACATATATATATATATACATACATATATAT	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5587:HG4_Ill_Krunchall_12872:HG3_Ill_Krunchall_12281:HG2_Ill_Krunchall_12590:HG4_PB_assemblyticsfalcon_25487:HG2_PB_HySA_16411:HG3_PB_pbsv_8929:HG4_Ill_MetaSV_5211:HG4_PB_SVrefine2Falcon1Dovetail_5563:HG4_Ill_svaba_11553:HG4_Ill_manta_2221:HG4_Ill_SVrefine2DISCOVARDovetail_6497:HG4_Ill_GATKHC_14793:HG4_Ill_GATKHCSBGrefine_6302:HG4_10X_allpass_1771:HG3_Ill_svaba_11553:HG3_Ill_scalpel_8807:HG3_Ill_manta_2115:HG3_Ill_SVrefine2DISCOVARDovetail_6696:HG3_Ill_GATKHCSBGrefine_6119:HG2_PB_assemblyticsfalcon_26048:HG2_PB_SVrefine2PBcRplusDovetail_10809:HG2_PB_SVrefine2PB10Xhap12_6681:HG2_PB_SVrefine2Falcon2Bionano_4459:HG2_PB_SVrefine2Falcon1plusDovetail_11620:HG2_Ill_svaba_11442:HG2_Ill_scalpel_8696:HG2_Ill_manta_2587:HG2_Ill_SVrefine2DISCOVARplusDovetail_12624:HG2_Ill_GATKHCSBGrefine_6183:HG2_Ill_250bpfermikitraw_12280:HG2_10X_SVrefine210Xhap12_6483:HG2_PB_assemblyticsPBcR_25236:HG3_PB_HySA_13666:HG2_PB_pbsv_9144:HG4_PB_pbsv_9176:HG4_PB_HySA_13230:HG3_PB_SVrefine2PBcRDovetail_4111;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6483:HG2_Ill_250bpfermikitraw_12280:HG2_Ill_GATKHCSBGrefine_6183:HG2_Ill_SVrefine2DISCOVARplusDovetail_12624:HG2_Ill_manta_2587:HG2_Ill_scalpel_8696:HG2_Ill_svaba_11442:HG2_PB_SVrefine2Falcon1plusDovetail_11620:HG2_PB_SVrefine2Falcon2Bionano_4459:HG2_PB_SVrefine2PB10Xhap12_6681:HG2_PB_SVrefine2PBcRplusDovetail_10809:HG2_PB_assemblyticsfalcon_26048:HG3_Ill_GATKHCSBGrefine_6119:HG3_Ill_SVrefine2DISCOVARDovetail_6696:HG3_Ill_manta_2115:HG3_Ill_scalpel_8807:HG3_Ill_svaba_11553:HG4_10X_allpass_1771:HG4_Ill_GATKHCSBGrefine_6302:HG4_Ill_GATKHC_14793:HG4_Ill_SVrefine2DISCOVARDovetail_6497:HG4_Ill_manta_2221:HG4_Ill_svaba_11553:HG4_PB_SVrefine2Falcon1Dovetail_5563;NumExactMatchSVs=24;ClusterMaxShiftDist=0.075188;ClusterMaxSizeDiff=0.075188;ClusterMaxEditDist=0.0757576;PBcalls=16;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-136;DistBack=-97;DistForward=-118;DistMin=-118;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=51;REFWIDENED=8:4343614-4343800;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3884.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:79:1/1:2:35:1:27:./.:0:0:0:0:1/1:0:50:./.:.:.:.:.:.
chr8	4941223	HG4_Ill_GATKHCSBGrefine_6304	TAAGATGGAAGTACACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_25955:HG4_Ill_MetaSV_5212:HG4_PB_assemblyticsfalcon_25495:HG2_PB_pbsv_9147:HG4_Ill_Krunchall_12885:HG3_PB_pbsv_8933:HG2_Ill_Krunchall_12601:HG2_PB_assemblyticsPBcR_25247:HG2_PB_PB10Xdip_30080:HG3_Ill_MetaSV_5153:HG2_PB_HySA_16421:HG2_Ill_MetaSV_4972:HG4_PB_pbsv_9179:HG4_PB_SVrefine2PBcRDovetail_4520:HG4_PB_SVrefine2Falcon1Dovetail_5565:HG4_Ill_scalpel_8466:HG4_Ill_manta_2222:HG4_Ill_SVrefine2DISCOVARDovetail_6502:HG4_Ill_GATKHCSBGrefine_6304:HG4_10X_allpass_1772:HG3_PB_SVrefine2PBcRDovetail_4113:HG3_Ill_SVrefine2DISCOVARDovetail_6699:HG3_Ill_GATKHCSBGrefine_6122:HG3_10X_allpass_1815:HG2_PB_SVrefine2PBcRplusDovetail_10811:HG2_PB_SVrefine2PB10Xhap12_6684:HG2_PB_SVrefine2Falcon2Bionano_4461:HG2_Ill_scalpel_8704:HG2_Ill_manta_2589:HG2_Ill_breakscan11_1319:HG2_Ill_SVrefine2DISCOVARplusDovetail_12629:HG2_Ill_GATKHCSBGrefine_6185:HG2_10X_SVrefine210Xhap12_6486:HG4_Ill_Spiral_746:HG3_Ill_Spiral_9614:HG2_Ill_Spiral_635:HG2_PB_SVrefine2PB10Xhap12_6683:HG3_PB_SVrefine2Falcon1Dovetail_5589;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6486:HG2_Ill_GATKHCSBGrefine_6185:HG2_Ill_SVrefine2DISCOVARplusDovetail_12629:HG2_Ill_breakscan11_1319:HG2_Ill_manta_2589:HG2_Ill_scalpel_8704:HG2_PB_SVrefine2Falcon2Bionano_4461:HG2_PB_SVrefine2PB10Xhap12_6684:HG2_PB_SVrefine2PBcRplusDovetail_10811:HG3_10X_allpass_1815:HG3_Ill_GATKHCSBGrefine_6122:HG3_Ill_SVrefine2DISCOVARDovetail_6699:HG3_PB_SVrefine2PBcRDovetail_4113:HG4_10X_allpass_1772:HG4_Ill_GATKHCSBGrefine_6304:HG4_Ill_SVrefine2DISCOVARDovetail_6502:HG4_Ill_manta_2222:HG4_Ill_scalpel_8466:HG4_PB_SVrefine2Falcon1Dovetail_5565:HG4_PB_SVrefine2PBcRDovetail_4520:HG4_PB_pbsv_9179;NumExactMatchSVs=21;ClusterMaxShiftDist=0.178862;ClusterMaxSizeDiff=0.178862;ClusterMaxEditDist=0.282927;PBcalls=16;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-297;DistBack=1933;DistForward=35731;DistMin=1933;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=8:4941224-4941532;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3885.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:24:0|1:27:1:0:25:./.:0:0:0:0:0/1:21:25:./.:.:.:.:.:.
chr8	5595517	HG2_PB_PB10Xdip_30103	TCCCACCTGATCCTTCAGTCAACCCAATTATCTTTTCTAAAATCTATTTTAAGTATTGAGACTGACTTTACACATTTATTTGAGATTTTTTTAAGTTTCACTGATAAATCACTTGTTTGACAAAATAAGGATTCAAGTGAAATCCCCAGAACGATAACTTTTCATGTAATAGGAGCGTGGGACGCTAAAGACAAAGTAGGTTTCCCAATCACTGAGATTAATCAAAGGACTGTTTGTGACTGCCAGGAAGGCAGGAAAATGCTTCTGTACATTTTTGTGTGTGTGGTGAGGGTTGGAAAGGGAGAGAAAAACTGAAACTGCGCTATAGCTACTAAATGGACACACCACTGTGGCTAAAGCCTCAGGCACATCGCTGCCTTGGAAGCCAGGACACATCAGTGAGAGCCTGTGCTTCCAGGCCGGCAACTGGCAAAACAAATATAGGCTGCTCCAGGCTTGCCTTTGCTAACTGGTTTCTTTTTTTCTTTTACACCAGGGGTAGTCCAGCCATGGTCTGGACAGGGATGAACAGAAATTTCTGGAAAGGGAGCTTTGCCATCACTATCATCGGAAGACTACGTAAGATGTCTCACTAAAATGTTTCTTTTTTTATCATTATACTCTTAAGTTCTGGGGTACATGTGCAGAATGTGCAGGTTTGTTACATAGGTATACATGTGCCATAGTGGTTTGCTGTACCCATCAACCCATCATCTACATTAGGTATTTCTCCTACTGCTATCCCGCCGCCACCTCCCACCCGCCACAGGCCCCAGTGTGTGATGTTCCCCCCCCCCGTATCCATGTGTTCTCATTGTTCAACTCTTCTGAGTGAGAACATGTGGTGTTTGGTTTTCTGTTCTTGTGTTACTTTGCTGGGAATGATGGTTTCCAGTTTTATCCACATCCCTGCAAAGGACATTAGCTCATCCTTTCTTATGGCTGCATACTATTCCATGCTGTATATGTGCCACATTTTATTTATCCAATCTACCATTGATGGGCATTTGGGTTGGCTCCAAGTCTTTGCTATTGTGAACAGTGCTGCAGTAAACATACATGTGCATGTGTCCTTATAGTAGAATGATATATAACCCTTTGGGTATATACTCAGTAATGGAATTGTTGGGTCAAATGGTATTTGTAGTTCTAGATCCTTGAGGAATCGCCACGGTTTCTTCCACAATGGTTGAACTAATTTACACTCACACCAGCAGTGTAAAAGTGTTCCTGTTTCTCCACATCCTCTCCAGCATCTGTTGTTTCCTGACTTTTTAATGATCGCTGTTTTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTAATGACCAGTGATTATGAGCATTTTTTCATATTTTTTTGGCTGCATAAATGTCTTCTAGAGAAGTGTCTGTTCATATCCTTCACCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCTTTGTAGATTCTGGATATTAGCCCTTTGTCAGATGGATAGTTTGCAAAAATTTTCTCCCATTCTGTAGGTTGCTGTTCACTCTGATGATATTTTCTTGTGCTGTGCAGAAGGTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCCCTTGGTGTTTTAGTCATGAAGTCTTTGCCTTTGCCTGTGGCCTGAATGGTATTGCCCAGGTTTTCTTCCAGGATATTTATGGTTTTAGGTCTTACATTGAAGTCTTTAATCCATTTTGAGTTAATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCTGCTTTCTTCATATGGCTAGCCAGTTTTCCCAACACCATTTATCAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTGTCGGGTTTGTCAAAGGTCAGATGGTTGCAGATGTGTGGTGTTATTTCTGAGGCCTCTGTTCTGTTCCATTGGTCTATATATCTGTTTTAGTACCAGTACTGTGCTGTTTTGTTTACTGTATCCTTGTAGTATAGTTTGAAGTCAGGTAGCGTGATGCCTCCAGCTTCATTGCTTAGGATTGTCTTGGCTATGCGAGCTCTTTTTTGGTTCCATATGAAATTTAAAGCAGTTTTTTTTTCCAATTCTGTGAAGAAAGTCAATGGTAGCTTGATGGGGATAGCATTGAATCTATAAATTACTTTGGGCAGTATGGCCATTTTTCATGGTATTGATTCTTCCTATCTGTGAGCATGGAATGTTTTTCCATTTGTTTGTGTCCTCTCTTACTTCCTTGAGCAGTGATTTGTAGTTCTCCTTGAAGAGGTCCTTCATGTCTCTTGTAAGTTGTATTCCTAGGTATTTTATTCTCTTTGTAGCAATTAGGAATGGGAGTTCACTCATAATTTGGCTCTCTGTCTGTTATTGGTGTATAGGAATGCTTGTCGTTTTTGCACACTGATTTCATATCCTGAGACTTTGCTGAAATTGCTTATTGGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATACACAATCATGTCATCTGCAAACAGATAATTTGACTTCCCCTTTTTCTAATTGAATACCCTTTATTTCTTTCTCTTGCCTGATTACTCTGGCCAGAACTTTAAAATTGCATACTCTTACCTTGAATTTGAGAGACAAAGGGCAGACAATAACAATAAACGTGTAAATAATACAATAAACGAGACTATGAATGAACAATAGACAATAATAGAATAGAAGAGCATTAGGACTTGAGGACTATTGGGCACGTTATTAAATAATATCCCAAGAGAGGGCATGGTTTGAGGCTGAAGAAAAATTGCTTCTGAAGTGTCCTACTGTCTTCATGTTTTCATGCTGTTTACAGGGACCTCCTTGACTGGATAGATTTCCCTCTTCTACTGAAGTGGCATGGTCTTACCATCCCATGTGGATTCAGCAGAGAGGAAAGGCCCATAGATGGTGTTCAAGCACATGTCATGCTGCTGGAAGCTGTGGACTCCTGGGTTTTCTCCCCTCCCAGGCTCTGAACCATTGGCAGTAGAGGTCACATTTAGTTATCACCTTCTCCCAGTGTCTAACTCAGCCTCACACATAGCAGGCACTGACATGTTAGGTTTTCTTTATTAATTAAACTCATTCGAAAATTACACATTTATTAATTAAAAGTTATAATAAGTTAACAAATTTATTTTCACAAAAAACATGATGCTCATAAGGAAGAGCCTGTGGAGAATATGGGTGGTGGAAGCCAGGATAAAGAAAGGCCTGCCGAGGAGGCTTGTACTTTCCTCCAGGACCCCTGCCCCTGCAGCAGACAGGTGCCCACAAGGGGCTCCATGCAGTGCTGGGACATGCTGCGTCTGGGGTAGGGGTGGCTGGGAGCCTTCCTCCAGCCTATTGCTGCCAACGGGCCTGGGACAGCCACCTGCATGCATCTCAACCAGATGTGCTGGGTGCACTCACTCTCCTGCACCCACGCCTAGCCCCTGCTCAGGCTTGGAGAGGGAGGGGAAGTTGGGTGGGACTCAAGGTCCACAGGGTCGGGGAGCAAGCAGCATGAGAAAAATTCAGAAGAGGAGATAGTGTTGTGGCTGTAGATGGGATCTCCTAGAAACTGAGACCCCAAGTCTCCCTGCAGTCTGCATCGTCCCATCAGATTTCACTTATGAAGCACATTTTGAAAGATGAAATATTAAGGATTCAGAACTGCAACCACAGATCATCAATCCCTAAGTGCAGAAAACTTCAGAGTCCAGGGCCCTCCAGACTGCCCTGGTCCCACCTCCATGAAGCTGGGCCTTGGTCTCCTGTGGTGGGATTGCCGACAGGACTGGCCTGGCTTTGGCAAACTCTCTAAGACTGCACCTCCAAGCCCACATGTTCAGGAGAACCCTGAGGGTCCACAGTGAGAAACCTCCCCGTGGGGAGAGGGCTCTCCCTGCACTGCACATGGAGCAGCAGAGCCTGAGAGGAAGGGAAGCACCTGCCTGAACCTCAGCCCAGGCGACACCTCCTTGTTCTGCAACCACCTGCACCCTGCATGTCTTTCATGATCTCACTGAGCCATGAAAATACTCACAGCCGTGACTGATACTGAACTTCCTATCCATCCTGAAAAATGGGTGCTGAAGACAGATGAAATTAGGTTAGAAAAAATAAAGAAAAGAGGCATTTCCTGAAGCTAACTGTTGTCAAGCAACTTCCTAACAGTTACCACTGAGACTCTACCTACCTCTGAAGTCTGCAAACTCTGAGTCAGAATTTCAAGGCTCCGTCTCCCGAGTCTCGGCTGCCGTCCAATGCTGCAGGCACAGTGCACTGGAACATTTATAATCCGGTTAGGTTTGTAAATTTTCATCTGGTCCCAGACAGACTGGGGACACACCCAAATCCAAATATGAATTTTGGAGAGGGTGGATATTATAACAAAAGCACAGAAGGAGCATGAAGAGATAAAGGAATATGTCTAGTACCAAATAGCTTTAAAATGTTTTTTCTTATTTAATTTTTTTAAACAAGGAAAAGACAAAATCTATTCCCAATTAAATTAGCTAGTAAAAGTAAAGTTTACCACAGTTAAAACAAAGTTATGAAATTATGAATGATGTCATTCGAATGTCAAAGCCTGATCTTTCTAACAATTTAATCATGGCTTAGGTATTTCCATACACTCTCATACTTTCATTACTTACATTTTACAGAAGAATTCTACCTGGAAGAAAATAGTGCCAGAGTATAGATAGCTTCAAAGAAGTGTAATTTTGCTCTTTAAAATTTCTTAAAGAAATTATGCTAATTTTTATAATACAATCTTTATATGCATAAAAATAAGTAGATAAAATACGAAGACTATTTCAGAAATAGGTAGGATTGATGTCTCTGAGATAAATTCGCTGAATCTTGCTCTTTAAAATGAGCTTTAGGTCATCCCAAAAACATCTCTATTTTCTCTGCTCCTTTCTGTCATCCCCTCACTTCCTCCCCTGCCACCCTATACTGTTCTTGGTGATGATTTTTCAGCAAATTTCCTAATATGTCTAAATTCATACATTGCCCTGTTCTTTCATCATCGCCTCTGTTGTCTCACAAATACAGTTTTCTAGTGTTTTTTTGGGAGAAAAGGAGAAATTGCCCATCTACTCACAGATTTGGCATAAACTATATAGAGATGTAGGGATTCCATTTTAGAAAGTCTACCAGCATACAGTACAGTTCTTGAGGAAGGTGAAGGTGAATTAATAAGGTAATGGAATATACCTTGTATGTGTTTGTCCAGCTAAGCGATTCTTGTCCCATTTGCAAAACTGAGTCAGGCTACATAGTCTTATTTTTCTATGAGACCTAACTGGGAGGTACATCAAGTAGGGGAAATAAATCAGCAATTAAGATTCTTCATATAAATTCCCAACTCTTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCCCCCTACCCCATACAGAGAACACAGATAGCCAATATGTCCACATTCAGTCTCATGGCAGTGTTCAATTTGGTCTTCTCTCTTCTATTATTCATTTTCTATTATTTATTTCCTTAACCTTCAGAGGTGTGCATGTGATAGATTATGACCTTATCTATCCACTCTTGTCTGGAATTCAGATGGTGCATGTAAATGCGTTTTCAGAATAAGAAAGTTATTAGGAAGTTCCTTGATGTTATCCATTATGGATAGAAAACTTGCTGATATTCACCACCCATCATTCCACAAAAGCATGCACCGAACATGATGTCTCCCCTTCGCTCTGCCTCCATAGTGTCTCTATGCTCCATAATTATGGTACTGAACTGCACTTGCAGATAACTGCAGAAGTTATTAAAGTGTCCAGGATGACTTGTCCCTACACTGAATGGCCCCCGAATGATGAATTTTTAAAGCACCTTTGTCTATAGTTTTATGATATTTGGTCGCCTATGCTGCATACCTCATTTCTTATTGCTGATAGTGTTCTCTACACCCCTTTATGCCTCCAACTTTTAACTTGTTTCTTTCAGGATTCCATAGGCTCAACAATGACCCAAATGTTTGCAATTCCATTTAAATAGATTTTTGATGTTATTCTCTCAAAAATAAAGGACAGTATATGGACTGTAGTATGAGGTGATTTTACTGTTGGTTTTATTGTTGTTAAGCTACTCTTTTTCTACTTTTCTCATTTTCTTGGTAAAGGGATCAGGTCATAGTACTATGAATCAATAGAACTGTTTGACTTTCAGTAGGTCATCCTGTTTTTCAGTGTCTGTTTTATCATCACTAAAAAGAATAGATTTGATAGAATGATTCCAAAAGTGCCTGACATGTGAAAAGTTTATAACTCTAAATGAGATGTACATATGCATATAAATAAGAGTTTGAGGATGATTACAGGGAACATAATAAAAAGCTAAATAGTAATTTTTGAGTCTAATGCTGTAAGTATAATGATATAGACTTAAAATTGTGGAAATAAAGACAATATTTATAGTCATATATTACCTGATATCCTTTTGTTATGAATATACTGAATCATTAATTGTTCAGAAAACAAATATTCTATCAGAAGGATTCTTATATAATTCTCTTTTCAAGCAAATGCATAAAATATACCATATATATGTAACTTTGTGTTTTTTGAAATGTGTTGTATTAACTAGCTAAGTGTTGGCTAAAGGATGTCAGATTTTTTTCTAAAGAGTGTGGAAAGGAGAGCATTTAATATATTTTAAGGCGTTGGATATAGGCTAGATCTTATGGTGGTCTTTTTGGTGCAGTTGTTCTTGTTATCGGCAAGATAATTCTTTGTCAGTGTCATATCTCCATGAAAGTTCAAACTGATGATAGCAGATAGTAAAATATGTATATTAAAACAATTTATCTGCACTGTTTATGATGGTAGAAATCTAGCTATACTTTTTATAATAAGGTTTCTTGAACCACAAATCAGAACACACATTCCAGTCTTCATGAGTTCATTTGACTGTGGGAATGCTTTTAAGAATTCTGTTTTCAGGAACATGGGAAGTATTGTTTTAGAAATGAATACCATCATACAATATGAGTGCATTTCCATTGAAAGAAAGAATCAGAAGACTTTCAGTGATGCTGATATTCCATTGTGACCCAGTTTCCATAGCGAACGTGACACAGTCACTGAGAAAAGGCAAACAAAATGACCGGCACCAATTTTCTGAACCAATGTTGTTGTAGATAAATAAGTGCTATCTCAAAACTAGGAGAAACATATTAAAATATATAGATTTTTCTGCTTGGTAGATTCCTGCATGAACTGTTGCAAAGTTGGCATCAATTGGCAATGACCCAACAAGAGATAGTAAACAAAAAAAGCTAAGAAAGCAAAATGATGTTTTCCAAGTGGCTTGTCTTGCTCTCTGTGTGCTGTAATTTTTGCTTGAATTTTGACAGCTAATCATTGGTAGGCATATGTTGCCTGTGAGTCTTCATCTTGCAGCAATGAAGCTTGGAGCCAAATTGACAGTGATTGCATTTTAAGTATCTATCGGCTCAAGAATTTACAAATATACAGAGGTTTTTGCAGAGATATTGACCATATGAAACCAAAGTCTTCTGAAATATAACTGCCTTTATTAATTCAGATTCATTGAGCCCCTATTATGAATCCAGAGCCTGAAGTTTGCCCAGTGCTATGAAAGAAATGCAGGAAAAAACATACATTCTGCTTTATTGTCCAGTATCTGATAGTTGAAATAAAGCCTGCGTACAGCCATAAAGCATAGCACAATGCAATGAGGATAATAAAAGTTATGAAAACAGTGGGATAAGCTAATTGGGATGAGGAAGTGAGCTAGCTGGAAATAGCAGGACATGATTTGTTAATGAGGTGGCATCTGAACTGCGTATTTAAACATCTCATCTGGGTATTGACTACAGATACAATTAAGAGAGTGATGTGAGTAAAAGCATACACAGTGATGTAAAATATAGGATAATTATTTAAAAATCATTGAGAGAAGTTAAATTTGAATGAAGAACAGACAAAACCAAAATGCTGATATAGTTGATCATGTTGGGTTAGATTAGATTTGAAAGATATAAATACTTGTTTATTTTTAAACAGAATGACACCTGAATAGATACATGAAAGATGAGTAGATAAAAAGAGAGTCAATTATCTGGAGATTATTATTTTATTTAATAAATCTGGGATTGTTTTATCTAATGTTCATGTCTGGTTTAATACTACATGTCTGTGGATATTTTATGTAATGTTTATTACAACCAGTCACATAGAGACTATTGTTACACCTTTGGTGTCGATGAGGCAGACGACGCTTAGGGAAGCTCAGAAACCCACCGAGCGCACCTGGATGATGACTGATGGCCAGTATTCAAATGCCTTCATTCTGCCCATAGCCTGGGCTTTTAACAACAATGGTATTCTACCTCCTGCTAAGTAGTAGTATAAGATTAATAATACAAGGCCAGGCGTGGTGGCTTTCTCTGGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGAGGCTCACTTGAGCCTAGGAGTACGAGAGCAGCCTGAGCAACATAGTGAGACCCCATATGTACAAAAAAAAAAAAAAAAAAAGCCTGATGTGCTGGCATGTGCCTATAGTCCCAGCTATTTGGGAGGCTGAGGCAAGAGGATTGGTTGAGCCCAGGAGGTCAAGGCTGCAGTGGGCTATACCAAAAAGAAAAAATAAAGATTAATAATATGGCAGTGATACACTTAGTTACACAGACAGAGTCCCACAGGAAATTAGAGTCCTGATTCAACCACAGATTCAAACCAGACATTCCCTCTACCTGAATATTTCTAGTTCTGGAAACCTCATTGGTCATTGTAGCTAATCACTTTTTAAAGCAAACTTTTAATTTATAATAATTTGAGAATTATGTTTAACTTTTTTTTTGTCCTTTCTGGAACCACAAAATGTCCCAGGCTTATCTTGTATATGTTCCATGTCAGTCTTAGAATTTTCCCTTACTGTGAGAAGATTTGGCTCCTTTAATTGAGAATGGTATTAGAAACCAAAATCTGCTTGCTAAGTGTGCTCAGTGCTACTGTACAATGCTCACATTGTTTCCAAGCACTCTGTTGAGAGCAGGAAAATATACTAGCATAGACTAGCCCATGCATAGACACATATCTTTAAATATTGTTAATGTAAACATCAGTATCTAAGCTACAAATGAGTTCCTATTAATTGTTCAATTCTGATACACCTCTGCATAGCGGTATCAGAAATGTTAAGCTGTACCCCATGGGAAACAAATTTCCTGCCAGAGCATGGTGCTTTTGTACAACTCCTTTGGCCTTCATTCTTATAGATTTCATTCATTTCCGAAGTTTCTTATGTCAGTAGGTTTTCCCCCAACCCCTTGCAGTTAGAGTATTCATAGATTTGTAACACATTTAAATCATTTTGTCACCTTTTGCCTTCTCTCCTGGTATCTCTGCTAATGTTTTGAAATATGTAGATGCCTAAAATTCCTCCTTTCATCTTCTGCAACTGTAGTATTTGGAGAAATCTTTCAACTGGTTTTCTTAGACTAACTGAACACATTTCTTTATTGTTTAAAACTACTGGATGTATTTATGTTCTCTGGTGTTGCACAAACTATTTTTTCTTCTTAAATACAGTAATTCATCAATTATTCTTTGAAAATAGATTTTACATATTCCTAACTCTTCTCTATGGAAGATGGAAGGAGGCCAAATTTTAGTACTGCTTCTAGTACAATAGGTTCCCAATGTTCTGCTGAAATAGGCTCTTTCTTTGTCAATAATATGTTAAATATGCCTCAAATTGATCATGGTGTTACACAAGTCATCTTCTTAGTGGCCTCGCTCATCAAGGTCTTTCGTTGATATGAAACTGGACAAGTTTCAATTCGTTTTTATTATAGTCAGTGTCATTATTATTGCATGAGGTTTTTTCAGATTTTGACCCAGCTTCCTCTACTATGTTTTAAAGCTGTATAATCCCTCTTAACTTTGTTTCCTTCCCATGAAAATTCATTTCTTATATATAAAATTTATTACTTCACTGGCAAATACTGTTAATTCTCTTCCCCTTCCACTTCTTCGTAGTATCTGAAATGCCAGGTTAAGATATTTTTAGACTTAATTCAGCATGAATGGAGAATTTAGGAAATACTTTGAATAGAAGATGGTTGATGCAGAATGTGTGCTTTTGAGAGAGTAATCTGACATCTGCTATGCAAGATGAATGAGTTCA	AC	20	PASS	ClusterIDs=HG4_Ill_MetaSV_5215:HG4_PB_pbsv_9185:HG2_PB_pbsv_9153:HG2_10X_allpass_1511:HG2_Ill_tnscope_1034:HG4_PB_SVrefine2PBcRDovetail_4523:HG4_Ill_SVrefine2DISCOVARDovetail_6505:HG2_PB_SVrefine2PBcRplusDovetail_10814:HG2_PB_SVrefine2PB10Xhap12_6688:HG2_PB_SVrefine2Falcon1plusDovetail_11623:HG2_PB_PB10Xdip_30103:HG2_Ill_SVrefine2DISCOVARplusDovetail_12633:HG2_10X_SVrefine210Xhap12_6489:HG2_Ill_MetaSV_4974:HG4_Ill_Krunchall_12891:HG4_10X_allpass_1774:HG2_Ill_Krunchall_12608;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6489:HG2_Ill_SVrefine2DISCOVARplusDovetail_12633:HG2_PB_PB10Xdip_30103:HG2_PB_SVrefine2Falcon1plusDovetail_11623:HG2_PB_SVrefine2PB10Xhap12_6688:HG2_PB_SVrefine2PBcRplusDovetail_10814:HG4_Ill_SVrefine2DISCOVARDovetail_6505:HG4_PB_SVrefine2PBcRDovetail_4523;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00844455;ClusterMaxSizeDiff=0.00844455;ClusterMaxEditDist=0.00844455;PBcalls=7;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-10261;DistBack=666;DistForward=-10263;DistMin=-10263;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:5595517-5605779;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9999;PctRecOverlap=0.9998;SizeDiff=-1;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=3886.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:75:45:0|1:58:3:3:20:./.:0:0:0:0:0/1:62:18:0/1:462:252:10477:.:.
chr8	5744849	HG2_Ill_manta_2591	CCAAATGTCCATCAATGATAGACTGAGGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAG	C	20	PASS	ClusterIDs=HG3_PB_pbsv_8939:HG2_PB_HySA_16429:HG3_Ill_svaba_11576:HG3_Ill_Krunchall_12300:HG3_Ill_GATKHC_14724:HG3_Ill_GATKHCSBGrefine_6127:HG3_Ill_250bpfermikitraw_11956:HG3_Ill_150bpfermikitraw_11622:HG3_CG_vcfBeta_4955:HG3_10X_allpass_1816:HG2_PB_assemblyticsfalcon_26063:HG2_Ill_svaba_11463:HG2_Ill_manta_2591:HG2_Ill_SpiralSDKrefine_16636:HG2_Ill_Krunchall_12610:HG2_Ill_GATKHC_14748:HG2_Ill_GATKHCSBGrefine_6191:HG2_Ill_250bpfermikitraw_12297:HG2_Ill_150bpfermikitraw_11564:HG2_CG_vcfBeta_5196:HG2_10X_allpass_1512:HG2_PB_assemblyticsPBcR_25257:HG2_PB_pbsv_9154;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_1512:HG2_CG_vcfBeta_5196:HG2_Ill_150bpfermikitraw_11564:HG2_Ill_250bpfermikitraw_12297:HG2_Ill_GATKHCSBGrefine_6191:HG2_Ill_GATKHC_14748:HG2_Ill_Krunchall_12610:HG2_Ill_SpiralSDKrefine_16636:HG2_Ill_manta_2591:HG2_Ill_svaba_11463:HG2_PB_assemblyticsfalcon_26063:HG3_10X_allpass_1816:HG3_CG_vcfBeta_4955:HG3_Ill_150bpfermikitraw_11622:HG3_Ill_250bpfermikitraw_11956:HG3_Ill_GATKHCSBGrefine_6127:HG3_Ill_GATKHC_14724:HG3_Ill_Krunchall_12300:HG3_Ill_svaba_11576;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0402685;ClusterMaxSizeDiff=0.0402685;ClusterMaxEditDist=0.0671141;PBcalls=5;Illcalls=14;TenXcalls=2;CGcalls=2;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=2;HG2count=14;HG3count=9;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-74;DistBack=36220;DistForward=-74;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:5744848-5744924;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3887.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:28:0|1:30:2:1:27:./.:0:0:0:0:0/1:35:21:./.:.:.:.:.:.
chr8	5748176	HG2_PB_pbsv_9155	TAAAAATGGAGAGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1320:HG3_Ill_Krunchall_12301:HG2_Ill_Krunchall_12611:HG2_PB_assemblyticsfalcon_26064:HG3_PB_assemblyticsfalcon_25967:HG2_PB_assemblyticsPBcR_25258:HG4_PB_pbsv_9187:HG4_Ill_MetaSV_5216:HG2_Ill_tnscope_1035:HG4_PB_SVrefine2PBcRDovetail_4525:HG4_Ill_manta_2224:HG4_Ill_GATKHCSBGrefine_6321:HG4_10X_allpass_1775:HG3_PB_pbsv_8940:HG3_PB_SVrefine2PBcRDovetail_4116:HG3_PB_SVrefine2Falcon1Dovetail_5593:HG3_Ill_manta_2117:HG3_Ill_GATKHCSBGrefine_6128:HG3_10X_allpass_1817:HG2_PB_pbsv_9155:HG2_PB_SVrefine2PBcRplusDovetail_10815:HG2_PB_SVrefine2PB10Xhap12_6689:HG2_PB_SVrefine2Falcon2Bionano_4464:HG2_PB_SVrefine2Falcon1plusDovetail_11624:HG2_Ill_manta_2592:HG2_Ill_GATKHCSBGrefine_6192:HG2_10X_SVrefine210Xhap12_6490:HG4_PB_HySA_13246;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6490:HG2_Ill_GATKHCSBGrefine_6192:HG2_Ill_manta_2592:HG2_PB_SVrefine2Falcon1plusDovetail_11624:HG2_PB_SVrefine2Falcon2Bionano_4464:HG2_PB_SVrefine2PB10Xhap12_6689:HG2_PB_SVrefine2PBcRplusDovetail_10815:HG2_PB_pbsv_9155:HG3_10X_allpass_1817:HG3_Ill_GATKHCSBGrefine_6128:HG3_Ill_manta_2117:HG3_PB_SVrefine2Falcon1Dovetail_5593:HG3_PB_SVrefine2PBcRDovetail_4116:HG3_PB_pbsv_8940:HG4_10X_allpass_1775:HG4_Ill_GATKHCSBGrefine_6321:HG4_Ill_manta_2224:HG4_PB_SVrefine2PBcRDovetail_4525;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.0645161;PBcalls=14;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-329;DistForward=-318;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=8:5748177-5748516;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3888.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:36:0|1:41:1:0:41:./.:0:0:0:0:0/1:21:14:0/1:20:6:.:.:.
chr8	5987709	HG4_PB_SVrefine2Falcon1Dovetail_5569	TCTGTGATTTAACAAGTCCTCCAGGGGACTCTGACACACCTTGAAGTTTGAAGACACCTGCTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6492:HG4_PB_HySA_13256:HG4_Ill_Spiral_748:HG2_Ill_Spiral_636:HG2_PB_pbsv_9158:HG4_PB_pbsv_9192:HG4_PB_SVrefine2PBcRDovetail_4528:HG4_PB_SVrefine2Falcon1Dovetail_5569:HG4_Ill_svaba_11581:HG4_Ill_scalpel_8473:HG4_Ill_manta_2225:HG4_Ill_SVrefine2DISCOVARDovetail_6510:HG4_Ill_Krunchall_12897:HG4_Ill_GATKHCSBGrefine_6326:HG4_Ill_250bpfermikitraw_12264:HG4_Ill_150bpfermikitraw_11761:HG2_PB_SVrefine2PBcRplusDovetail_10818:HG2_PB_SVrefine2PB10Xhap12_6693:HG2_PB_SVrefine2Falcon2Bionano_4467:HG2_PB_HySA_16442:HG2_Ill_svaba_11467:HG2_Ill_scalpel_8709:HG2_Ill_manta_2593:HG2_Ill_SpiralSDKrefine_16639:HG2_Ill_GATKHCSBGrefine_6194:HG2_Ill_250bpfermikitraw_12300:HG2_Ill_150bpfermikitraw_11568;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6492:HG4_PB_SVrefine2PBcRDovetail_4528:HG4_PB_SVrefine2Falcon1Dovetail_5569:HG4_Ill_svaba_11581:HG4_Ill_scalpel_8473:HG4_Ill_manta_2225:HG4_Ill_SVrefine2DISCOVARDovetail_6510:HG4_Ill_Krunchall_12897:HG4_Ill_GATKHCSBGrefine_6326:HG4_Ill_250bpfermikitraw_12264:HG4_Ill_150bpfermikitraw_11761:HG2_PB_SVrefine2PBcRplusDovetail_10818:HG2_PB_SVrefine2PB10Xhap12_6693:HG2_PB_SVrefine2Falcon2Bionano_4467:HG2_PB_HySA_16442:HG2_Ill_svaba_11467:HG2_Ill_scalpel_8709:HG2_Ill_manta_2593:HG2_Ill_SpiralSDKrefine_16639:HG2_Ill_GATKHCSBGrefine_6194:HG2_Ill_250bpfermikitraw_12300:HG2_Ill_150bpfermikitraw_11568;NumExactMatchSVs=22;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.0322581;PBcalls=9;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=3372;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=63;REFWIDENED=8:5987710-5987834;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3889.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:27:0|1:34:0:1:26:./.:0:0:0:0:0/1:30:20:./.:.:.:.:.:.
chr8	6587829	HG4_PB_SVrefine2Falcon1Dovetail_5573	AATCATAGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGTTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_4979:HG2_PB_PB10Xdip_30196:HG2_PB_SVrefine2PB10Xhap12_6700:HG2_10X_allpass_1514:HG3_PB_assemblyticsfalcon_25984:HG2_PB_assemblyticsPBcR_25276:HG4_Ill_Krunchall_12906:HG2_Ill_breakscan11_1322:HG2_PB_HySA_16456:HG4_PB_HySA_13270:HG4_PB_pbsv_9199:HG4_PB_SVrefine2PBcRDovetail_4531:HG4_PB_SVrefine2Falcon1Dovetail_5573:HG4_Ill_scalpel_8483:HG4_Ill_manta_2226:HG4_Ill_SVrefine2DISCOVARDovetail_6511:HG4_Ill_GATKHCSBGrefine_6331:HG4_10X_allpass_1777:HG3_PB_SVrefine2Falcon1Dovetail_5601:HG2_PB_pbsv_9165:HG2_PB_SVrefine2PBcRplusDovetail_10823:HG2_PB_SVrefine2PB10Xhap12_6699:HG2_Ill_scalpel_8719:HG2_Ill_manta_2595:HG2_Ill_SVrefine2DISCOVARplusDovetail_12638:HG2_Ill_GATKHCSBGrefine_6199:HG2_10X_SVrefine210Xhap12_6496:HG4_Ill_MetaSV_5220:HG2_Ill_tnscope_1037;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6496:HG2_Ill_GATKHCSBGrefine_6199:HG2_Ill_SVrefine2DISCOVARplusDovetail_12638:HG2_Ill_manta_2595:HG2_Ill_scalpel_8719:HG2_PB_SVrefine2PB10Xhap12_6699:HG2_PB_SVrefine2PBcRplusDovetail_10823:HG2_PB_pbsv_9165:HG3_PB_SVrefine2Falcon1Dovetail_5601:HG4_10X_allpass_1777:HG4_Ill_GATKHCSBGrefine_6331:HG4_Ill_SVrefine2DISCOVARDovetail_6511:HG4_Ill_manta_2226:HG4_Ill_scalpel_8483:HG4_PB_SVrefine2Falcon1Dovetail_5573:HG4_PB_SVrefine2PBcRDovetail_4531:HG4_PB_pbsv_9199;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0996785;ClusterMaxSizeDiff=0.0996785;ClusterMaxEditDist=0.0996785;PBcalls=13;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=49555;DistForward=2070;DistMin=2070;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:6587830-6588164;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3890.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:0|1:31:0:1:33:./.:0:0:0:0:0/1:24:25:0/1:31:9:.:.:.
chr8	6656095	HG2_PB_HySA_16457	TTGCGAAAATCTGAGCATTCTTGCCAAAAGGGGTGACAGGCAGTCCTGTGAGGGGC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_637:HG4_PB_HySA_13272:HG3_PB_assemblyticsfalcon_25986:HG2_PB_pbsv_9166:HG4_PB_pbsv_9201:HG4_PB_SVrefine2PBcRDovetail_4532:HG4_Ill_SVrefine2DISCOVARDovetail_6512:HG4_Ill_250bpfermikitraw_12275:HG2_PB_SVrefine2PB10Xhap12_6701:HG2_PB_HySA_16457:HG2_Ill_SpiralSDKrefine_16648:HG2_Ill_SVrefine2DISCOVARplusDovetail_12639:HG2_Ill_250bpfermikitraw_12311;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12311:HG2_Ill_SVrefine2DISCOVARplusDovetail_12639:HG2_Ill_SpiralSDKrefine_16648:HG2_PB_HySA_16457:HG2_PB_SVrefine2PB10Xhap12_6701:HG4_Ill_250bpfermikitraw_12275:HG4_Ill_SVrefine2DISCOVARDovetail_6512:HG4_PB_SVrefine2PBcRDovetail_4532;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0550459;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=7727;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=110;REFWIDENED=8:6656096-6656260;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3891.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:16:0|1:31:2:3:14:./.:0:0:0:0:0/1:31:16:./.:.:.:.:.:.
chr8	6740273	HG2_10X_SVrefine210Xhap12_6497	AGATGGAAGGAGCTGGATTTCTGGTCCTGGATGGAAGGAGCTGGATTTCTGACCCTGGATGGAAGGCGCTGGATTTCTGACCCTGGATGGAAGGCGCTGGATTTCTGGCCCTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6497:HG4_PB_pbsv_9202:HG2_PB_pbsv_9167:HG3_PB_pbsv_8951:HG4_Ill_SVrefine2DISCOVARDovetail_6513:HG3_Ill_SVrefine2DISCOVARDovetail_6704;NumClusterSVs=6;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6497:HG4_Ill_SVrefine2DISCOVARDovetail_6513:HG3_Ill_SVrefine2DISCOVARDovetail_6704;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0178571;ClusterMaxSizeDiff=0.0178571;ClusterMaxEditDist=0.0358744;PBcalls=3;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-112;DistBack=12350;DistForward=15635;DistMin=12350;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=169;REFWIDENED=8:6740274-6740554;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3892.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:17:1|0:0:16:33:3:./.:0:0:0:0:0/1:10:9:./.:.:.:.:.:.
chr8	8245067	HG2_Ill_svaba_11486	TGAGAGGAGGAAGATGGGCCCCCACCCCCACCCCCAGATCCCTGGCTCTCCTCTTTGCTGCTGTGGGTGTGGACAGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6507:HG2_PB_HySA_16479:HG4_PB_HySA_13285:HG2_PB_assemblyticsfalcon_26085:HG4_PB_pbsv_9210:HG4_PB_assemblyticsfalcon_25528:HG4_PB_SVrefine2PBcRDovetail_4538:HG4_Ill_svaba_11602:HG4_Ill_scalpel_8494:HG4_Ill_SVrefine2DISCOVARDovetail_6519:HG4_Ill_Krunchall_12919:HG4_Ill_GATKHC_14849:HG4_Ill_GATKHCSBGrefine_6342:HG4_Ill_Cortex_3583:HG4_Ill_250bpfermikitraw_12285:HG4_Ill_150bpfermikitraw_11781:HG2_PB_pbsv_9174:HG2_Ill_svaba_11486:HG2_Ill_scalpel_8733:HG2_Ill_manta_2601:HG2_Ill_breakscan11_1326:HG2_Ill_SpiralSDKrefine_16665:HG2_Ill_SVrefine2DISCOVARplusDovetail_12646:HG2_Ill_Krunchall_12638:HG2_Ill_GATKHC_14781:HG2_Ill_GATKHCSBGrefine_6209:HG2_Ill_Cortex_8726:HG2_Ill_250bpfermikitraw_12323:HG2_Ill_150bpfermikitraw_11587:HG2_10X_allpass_1520;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6507:HG4_PB_pbsv_9210:HG4_PB_assemblyticsfalcon_25528:HG4_PB_SVrefine2PBcRDovetail_4538:HG4_Ill_svaba_11602:HG4_Ill_scalpel_8494:HG4_Ill_SVrefine2DISCOVARDovetail_6519:HG4_Ill_Krunchall_12919:HG4_Ill_GATKHC_14849:HG4_Ill_GATKHCSBGrefine_6342:HG4_Ill_Cortex_3583:HG4_Ill_250bpfermikitraw_12285:HG4_Ill_150bpfermikitraw_11781:HG2_PB_pbsv_9174:HG2_Ill_svaba_11486:HG2_Ill_scalpel_8733:HG2_Ill_manta_2601:HG2_Ill_breakscan11_1326:HG2_Ill_SpiralSDKrefine_16665:HG2_Ill_SVrefine2DISCOVARplusDovetail_12646:HG2_Ill_Krunchall_12638:HG2_Ill_GATKHC_14781:HG2_Ill_GATKHCSBGrefine_6209:HG2_Ill_Cortex_8726:HG2_Ill_250bpfermikitraw_12323:HG2_Ill_150bpfermikitraw_11587:HG2_10X_allpass_1520;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0130719;ClusterMaxSizeDiff=0.0130719;ClusterMaxEditDist=0.0522876;PBcalls=7;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=21;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-76;DistBack=5470;DistForward=8773;DistMin=5470;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=8:8245068-8245146;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3893.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:10:./.:23:0:3:9:./.:0:0:0:0:0/1:28:22:./.:.:.:4167043:.:.
chr8	8386030	HG2_Ill_MetaSV_4985	CTGGGATTACAGGTGTGAGCCACCACACCCGGCTCTGCTTTCTTGTTTTTAAGGACAAGCTGACATGTTAGTAGCATCTGGAACCAACAAGGGAGCAGCAGCAAGAATGAGTTTTGAGTATTCCTGTGGCTTATCCACAGATTCTCTAGGGCACCTGACCACTAGCCTTACATACTGAACGATGAAGACAAGCCAATTTCTTAAACCAAAAGCGTAGGAAAATGCTGGGTGCATACGGTATACAAAAGATTGATTCTTTGTTGTCTCTATTGTTAGTGTTGGATGTTCAAAGGCTTCTTTTACTTCTTCCCAAAAGGTTCCTCCTGGTCCAAGATTTTCAGCCCAATTTAAGTAAACCCCGATCAAAGAGCTAAATTTCAGAAAATTCAAAGTAGGTCTTTACCATAGAAGCGTTGAGGCATTTAATCAGTGAACAGGTATTAAAATGAGGAGGTCTCTCTTTTTTTTTCTTTCTTTAAAGACAAGGTCTGGCCGGGCGCAGTGGCTCACACCTATAATCCCACCACTTTGGGAGGCTGAGGAGGGTGGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGACTGGCCAACATGGTGAAACCCCGTCTCCACTAAAATACAACAATTAGCCAGGTGTAGTGGTGCATGCCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGTAGGCAGAGGTTGCAGTGAGTAGAGATCATGCCACTGCACTCCTCCCTGGATGATAGCAAGACTCCGGCTCAAAAAATAAATAAATAAATAAATAAATAAAGACAAGGTCTCACTCTGCTGACCAGGCTGGAATGCAGTGGTGCAATCACAGTTCACTGTACCCTCAAACTCCTGGGCTCCAGCGATCGTCTCACCTCAGGCTCCCAGTGCAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6508:HG2_10X_allpass_1521:HG2_PB_assemblyticsfalcon_26088:HG3_PB_assemblyticsfalcon_25997:HG2_PB_assemblyticsPBcR_25288:HG2_PB_pbsv_9177:HG2_Ill_tnscope_1041:HG3_PB_pbsv_8960:HG3_Ill_manta_2122:HG3_Ill_MetaSV_5164:HG3_Ill_GATKHCSBGrefine_6145:HG3_10X_allpass_1821:HG2_Ill_manta_2602:HG2_Ill_MetaSV_4985:HG2_Ill_GATKHCSBGrefine_6211:HG4_PB_SVrefine2Falcon1Dovetail_5579:HG3_PB_SVrefine2PBcRDovetail_4127:HG3_PB_SVrefine2Falcon1Dovetail_5607:HG2_PB_SVrefine2PBcRplusDovetail_10830:HG2_PB_SVrefine2PB10Xhap12_6717:HG2_PB_SVrefine2Falcon1plusDovetail_11634;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6211:HG2_Ill_MetaSV_4985:HG2_Ill_manta_2602:HG3_10X_allpass_1821:HG3_Ill_GATKHCSBGrefine_6145:HG3_Ill_MetaSV_5164:HG3_Ill_manta_2122:HG3_PB_pbsv_8960;NumExactMatchSVs=8;ClusterMaxShiftDist=0.16496;ClusterMaxSizeDiff=0.16496;ClusterMaxEditDist=0.16496;PBcalls=11;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-914;DistBack=4703;DistForward=-903;DistMin=-903;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=73;REFWIDENED=8:8385981-8386967;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3894.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:40:./.:16:11:8:25:./.:0:0:0:0:0/1:53:17:0/1:99:42:4167043:.:.
chr8	9107015	HG4_Ill_GATKHCSBGrefine_6346	GTGCGACTCGTCCTGCTACATTTCTTGGTTACAAAAACCTCTTCCTTCTTTAATCCGGTGTCCGAGGAGTTTTGTC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6511:HG2_PB_assemblyticsfalcon_26096:HG4_Ill_Krunchall_12928:HG4_Ill_GATKHCSBGrefine_6346:HG4_Ill_250bpfermikitraw_12292:HG2_PB_assemblyticsPBcR_25295:HG2_Ill_GATKHCSBGrefine_6214:HG2_Ill_250bpfermikitraw_12333:HG2_PB_pbsv_9181:HG4_Ill_SVrefine2DISCOVARDovetail_6524:HG2_PB_SVrefine2PB10Xhap12_6724:HG2_Ill_SVrefine2DISCOVARplusDovetail_12648;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12333:HG2_Ill_GATKHCSBGrefine_6214:HG2_PB_assemblyticsPBcR_25295:HG4_Ill_250bpfermikitraw_12292:HG4_Ill_GATKHCSBGrefine_6346:HG4_Ill_Krunchall_12928;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0266667;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.08;PBcalls=4;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-75;DistBack=8025;DistForward=-14;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=148;REFWIDENED=8:9106972-9107194;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3895.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:./.:9:6:8:15:./.:0:0:0:0:0/1:24:14:./.:.:.:4167043:.:.
chr8	9514721	HG3_PB_SVrefine2PBcRDovetail_4130	CCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6727:HG4_PB_assemblyticsfalcon_25540:HG3_PB_assemblyticsfalcon_26007:HG4_Ill_Krunchall_12934:HG3_Ill_GATKHC_14774:HG3_PB_SVrefine2PBcRDovetail_4130:HG2_PB_SVrefine2PBcRplusDovetail_10835;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6727:HG3_PB_SVrefine2PBcRDovetail_4130:HG2_PB_SVrefine2PBcRplusDovetail_10835;NumExactMatchSVs=3;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.0784314;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=46888;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=88;REFWIDENED=8:9514722-9514859;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.98;PctRecOverlap=0.902;SizeDiff=1;StartDistance=-5;EndDistance=-4;GTMatch=0;TruScore=95;MatchId=3897.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:0|1:25:5:5:23:./.:0:0:0:0:0/0:29:1:./.:.:.:4167043:.:.
chr8	9688619	HG2_Ill_svaba_11500	AGAAGTAGGTGCTGACCTCTAGTGGACATGTGTAGCAATACAGCTCTACACG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6515:HG4_PB_HySA_13298:HG3_PB_HySA_13751:HG4_PB_pbsv_9224:HG3_PB_pbsv_8968:HG2_PB_pbsv_9189:HG2_PB_HySA_16499:HG4_Ill_svaba_11614:HG4_Ill_scalpel_8505:HG4_Ill_manta_2231:HG4_Ill_Krunchall_12937:HG4_Ill_GATKHC_14865:HG4_Ill_GATKHCSBGrefine_6351:HG4_Ill_250bpfermikitraw_12301:HG4_Ill_150bpfermikitraw_11795:HG3_Ill_svaba_11605:HG3_Ill_scalpel_8855:HG3_Ill_manta_2125:HG3_Ill_Krunchall_12346:HG3_Ill_GATKHC_14776:HG3_Ill_GATKHCSBGrefine_6149:HG3_Ill_250bpfermikitraw_12003:HG3_Ill_150bpfermikitraw_11660:HG2_Ill_svaba_11500:HG2_Ill_scalpel_8743:HG2_Ill_manta_2603:HG2_Ill_SpiralSDKrefine_16678:HG2_Ill_Krunchall_12659:HG2_Ill_GATKHC_14801:HG2_Ill_GATKHCSBGrefine_6218:HG2_Ill_250bpfermikitraw_12343:HG2_Ill_150bpfermikitraw_11606:HG4_PB_SVrefine2PBcRDovetail_4544:HG4_PB_SVrefine2Falcon1Dovetail_5587:HG4_Ill_SVrefine2DISCOVARDovetail_6530:HG3_PB_SVrefine2PBcRDovetail_4133:HG3_PB_SVrefine2Falcon1Dovetail_5615:HG3_Ill_SVrefine2DISCOVARDovetail_6717:HG2_PB_SVrefine2PBcRplusDovetail_10838:HG2_PB_SVrefine2PB10Xhap12_6731:HG2_PB_SVrefine2Falcon1plusDovetail_11641:HG2_Ill_SVrefine2DISCOVARplusDovetail_12653;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11606:HG2_Ill_250bpfermikitraw_12343:HG2_Ill_GATKHCSBGrefine_6218:HG2_Ill_GATKHC_14801:HG2_Ill_Krunchall_12659:HG2_Ill_SpiralSDKrefine_16678:HG2_Ill_manta_2603:HG2_Ill_scalpel_8743:HG2_Ill_svaba_11500:HG3_Ill_150bpfermikitraw_11660:HG3_Ill_250bpfermikitraw_12003:HG3_Ill_GATKHCSBGrefine_6149:HG3_Ill_GATKHC_14776:HG3_Ill_Krunchall_12346:HG3_Ill_manta_2125:HG3_Ill_scalpel_8855:HG3_Ill_svaba_11605:HG4_Ill_150bpfermikitraw_11795:HG4_Ill_250bpfermikitraw_12301:HG4_Ill_GATKHCSBGrefine_6351:HG4_Ill_GATKHC_14865:HG4_Ill_Krunchall_12937:HG4_Ill_manta_2231:HG4_Ill_scalpel_8505:HG4_Ill_svaba_11614;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0392157;PBcalls=13;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=1;SVLEN=-51;DistBack=-43;DistForward=43505;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=95;REFWIDENED=8:9688568-9688713;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3898.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:1/1:2:42:0:19:./.:0:0:0:0:1/1:0:35:./.:.:.:4167043:.:.
chr8	10691088	HG3_Ill_MetaSV_5169	AGACGACTGGGGTGCGGGAGGCTGGAGAAGAATGACAACTGGGGTGCGGGAGGCTGGAGAAGAATGACGACTGGGGTGCGGGAGGCTGGAGAAGAATGACGACTGGGGTGCGGGAGGCTGGAGAAGAAT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11649:HG2_PB_assemblyticsPBcR_25321:HG4_PB_assemblyticsfalcon_25565:HG3_PB_assemblyticsfalcon_26025:HG4_PB_SVrefine2PBcRDovetail_4550:HG4_PB_SVrefine2Falcon1Dovetail_5595:HG4_Ill_SVrefine2DISCOVARDovetail_6536:HG3_PB_SVrefine2PBcRDovetail_4139:HG3_PB_SVrefine2Falcon1Dovetail_5622:HG3_Ill_SVrefine2DISCOVARDovetail_6722:HG2_PB_SVrefine2PBcRplusDovetail_10845:HG2_PB_SVrefine2PB10Xhap12_6740:HG2_PB_SVrefine2Falcon2Bionano_4491:HG2_Ill_SVrefine2DISCOVARplusDovetail_12659:HG2_10X_SVrefine210Xhap12_6522:HG4_Ill_Krunchall_12944:HG2_Ill_Krunchall_12665:HG3_PB_HySA_13761:HG2_PB_HySA_16515:HG3_PB_pbsv_8978:HG2_PB_pbsv_9202:HG4_Ill_MetaSV_5231:HG4_Ill_GATKHC_14876:HG4_Ill_GATKHCSBGrefine_6358:HG4_10X_allpass_1781:HG3_Ill_MetaSV_5169:HG3_Ill_GATKHC_14781:HG3_Ill_GATKHCSBGrefine_6155:HG3_Ill_250bpfermikitraw_12009:HG3_Ill_150bpfermikitraw_11665:HG3_10X_allpass_1823:HG2_Ill_MetaSV_4991:HG2_Ill_Krunchall_12664:HG2_Ill_GATKHCSBGrefine_6224:HG4_PB_pbsv_9235;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6224:HG2_Ill_Krunchall_12664:HG2_Ill_MetaSV_4991:HG3_10X_allpass_1823:HG3_Ill_150bpfermikitraw_11665:HG3_Ill_250bpfermikitraw_12009:HG3_Ill_GATKHCSBGrefine_6155:HG3_Ill_GATKHC_14781:HG3_Ill_MetaSV_5169:HG4_10X_allpass_1781:HG4_Ill_GATKHCSBGrefine_6358:HG4_Ill_GATKHC_14876:HG4_Ill_MetaSV_5231;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.0784314;PBcalls=16;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-128;DistBack=27581;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=125;REFWIDENED=8:10691050-10691302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3900.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:41:1/1:1:17:1:20:./.:0:0:0:0:1/1:0:35:./.:.:.:4167043:.:.
chr8	11245558	HG2_Ill_Cortex_8742	AAAGAGGTAAGAAGATACTTCCATGTTATTCCCAAAGCTTCTTGTGAATAATCTTACTGAACCCCCACCGTGATCTTCCCCAGCTGGGTGATCAAGCCAGGACCACCTGAAAATGCTCTCCTAATGCCTGAGTCTATTGTTCAGGGACGTGGTGTCCTTTCTTCATTCCCTGGGCACTCTTAGAGAGATCATGCACCCTGCCTTTCTCTCCTCCTCAGTGTCGAACCTCAGGTAACATTTCTCCCAATTCCCACTCCTCTTCCTCCAGGGAATCAAAGGCCTTTTGCCAACTTTTAAAATCCAAACGCCCAACTGCACACTAGATGTTACATTTTTTTTTTTTTAGAGGAGAGGGTGCTGTCTTTTCATCAGATTCTCAAAGGGTCCCCTTCCACCCCAAAGGATAAAGAACCACGATGCTAAAGGATGTCCACCTAAAGGGCGACAGCTCTAGTGTGAGGGTACAAGCTTGCCATCTCACTCCCACCACCTGCCCAGGGCAGCAGGCCTGAGAGCAGGGCAGTCTTTGACAAGCCAGCAGTGCTCGTGCCAGAGGAAAACAGGGTGGGTCGTGCACCTGTGCTGGAGCAGTTACAGGCCCCACTTAGCTTATCGGCCGGCCGCTCTGCTCGGGTCTTGAGGCTCAGACCTTGTGAGCTGATAGCATCCTCCCTCTTTCCAGAGTCAACACAGCCATGGGCCCGGGAAGCTGGCAGCCATTCTCAGGAAGGGGGTCGAATGCCATGTTATCACCGGGCTGGCAGTTGTGTAGCCTTCGCCGGGACGGGCCCCTTTGGCTTGTTCTCCTTATCTTCTCTCCTCTCAAGGCCCTGCAGTGGTTATTGAGGGCAGCGGATCCAAGGGCATAATCTCCCTCCTGCCTCAGGCTCCCTGAGATCTGTAGCGAACATCCACCGTTCCTCAATGTTCCTCACCCTTCTTCAGTCTGATGTCTTAGTCCCCCAGACATTTCTTATTCATCACTGGTAGGGAGCGTTGCAGGGCCCCTGTGCCTCTAGAACCATAGGCATGGGCGAGAATGCAGACTCAGCACCTGCGGAGGGGGCTTTGGACCTGTGTCTGGCAAACATCCTTGGATTGTGACAGGGTGGGCTGAACTGCTGGGTAAGAGATGGAGACCAGCTGAGCATCGCAGGTTCGGGTATTCTATGTGGTGCCAACACCACGGAGGTCTTCAGTCCTGTGTGAGCAGAGCTTAAAGGGAAATGTCACGTTAGGGAGAGCTGCAAGGTTTCCTGCCACACACTACCAGGAGAAAGAAGCCACTTGTGTATGTGGGTACGACTAGAAAGGTGAGCCGCAGGACTAGAAGTGGTGGAATGCATTCTGGAAGGCCCATCAGGCCAGATGGGCAAGTTATCCTGGAAGTGATTGACAGCAAAATCACACCCAGGAAACTCAGAGACCTAAAGACGGCCCCGCTTCTCATTCTATGTAAAACCCGTTTCAGAAGAGAGAGAGGGAGGCCACGCTGATTATTCTTGGAAAAGGTCAGCTTGGGTGGCACCTGTTCAGACTGGATGAGGGCAGGTGCGATGGATGTGACTCAGCTCCCGACCGGCAGTATCCCAGGGAGCAGGGACAAGCAGGTCCTCAGCTCTGGTCAGAAAGCAGAGGACCCTGGACCCC	A	20	PASS	ClusterIDs=HG3_10X_allpass_1825:HG3_Ill_Krunchall_12353:HG4_PB_assemblyticsfalcon_25569:HG3_PB_assemblyticsfalcon_26029:HG3_PB_pbsv_8983:HG2_PB_SVrefine2PB10Xhap12_6743:HG4_PB_pbsv_9238:HG4_PB_SVrefine2PBcRDovetail_4551:HG4_PB_SVrefine2Falcon1Dovetail_5596:HG4_Ill_MetaSV_5232:HG4_Ill_Cortex_3586:HG4_10X_allpass_1782:HG3_PB_SVrefine2PBcRDovetail_4141:HG3_PB_SVrefine2Falcon1Dovetail_5623:HG3_Ill_SVrefine2DISCOVARDovetail_6724:HG3_Ill_MetaSV_5171:HG3_Ill_GATKHCSBGrefine_6157:HG3_Ill_Cortex_3610:HG2_PB_pbsv_9207:HG2_PB_SVrefine2Falcon1plusDovetail_11650:HG2_Ill_breakscan11_1328:HG2_Ill_SpiralSDKrefine_16687:HG2_Ill_SVrefine2DISCOVARplusDovetail_12661:HG2_Ill_MetaSV_4993:HG2_Ill_Cortex_8742:HG2_10X_allpass_1523:HG2_10X_SVrefine210Xhap12_6527:HG2_Ill_tnscope_1042;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6527:HG2_10X_allpass_1523:HG2_Ill_Cortex_8742:HG2_Ill_MetaSV_4993:HG2_Ill_SVrefine2DISCOVARplusDovetail_12661:HG2_Ill_SpiralSDKrefine_16687:HG2_Ill_breakscan11_1328:HG2_PB_SVrefine2Falcon1plusDovetail_11650:HG2_PB_pbsv_9207:HG3_Ill_Cortex_3610:HG3_Ill_GATKHCSBGrefine_6157:HG3_Ill_MetaSV_5171:HG3_Ill_SVrefine2DISCOVARDovetail_6724:HG3_PB_SVrefine2Falcon1Dovetail_5623:HG3_PB_SVrefine2PBcRDovetail_4141:HG4_10X_allpass_1782:HG4_Ill_Cortex_3586:HG4_Ill_MetaSV_5232:HG4_PB_SVrefine2Falcon1Dovetail_5596:HG4_PB_SVrefine2PBcRDovetail_4551:HG4_PB_pbsv_9238;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0139183;ClusterMaxSizeDiff=0.0139183;ClusterMaxEditDist=0.0139183;PBcalls=11;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1649;DistBack=42162;DistForward=-1648;DistMin=-1648;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=8:11245559-11247214;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3901.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:25:./.:22:12:20:16:./.:0:0:0:0:0/1:41:18:0/1:145:58:4167043:.:.
chr8	13169572	HG2_Ill_GATKHCSBGrefine_6246	TAAAAATAATTTCTTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_641:HG4_10X_allpass_1784:HG4_PB_HySA_13345:HG4_Ill_Krunchall_12964:HG2_PB_assemblyticsfalcon_26138:HG2_PB_assemblyticsPBcR_25343:HG4_PB_pbsv_9248:HG2_PB_SVrefine2PB10Xhap12_6753:HG2_PB_PB10Xdip_29358:HG2_PB_PB10Xdip_29357:HG4_Ill_MetaSV_5236:HG2_Ill_tnscope_1044:HG2_Ill_MetaSV_4998:HG4_Ill_manta_2234:HG4_Ill_SVrefine2DISCOVARDovetail_6546:HG4_Ill_GATKHCSBGrefine_6366:HG2_PB_SVrefine2PBcRplusDovetail_10856:HG2_PB_SVrefine2PB10Xhap12_6752:HG2_PB_SVrefine2Falcon1plusDovetail_11658:HG2_Ill_manta_2610:HG2_Ill_GATKHCSBGrefine_6246:HG2_10X_SVrefine210Xhap12_6536:HG2_PB_pbsv_9216;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6536:HG2_Ill_GATKHCSBGrefine_6246:HG2_Ill_manta_2610:HG2_PB_SVrefine2Falcon1plusDovetail_11658:HG2_PB_SVrefine2PB10Xhap12_6752:HG2_PB_SVrefine2PBcRplusDovetail_10856:HG4_Ill_GATKHCSBGrefine_6366:HG4_Ill_SVrefine2DISCOVARDovetail_6546:HG4_Ill_manta_2234;NumExactMatchSVs=9;ClusterMaxShiftDist=0.13522;ClusterMaxSizeDiff=0.13522;ClusterMaxEditDist=0.13522;PBcalls=11;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-53;DistForward=-304;DistMin=-304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=8:13169573-13169909;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3902.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:28:0|1:32:0:4:27:./.:0:0:0:0:0/1:22:22:0/1:23:9:.:.:.
chr8	13310933	HG2_Ill_GATKHCSBGrefine_6247	GTGTATATATATATGTATATATATACATATATATATGTATATATATACATATATATGTATATATATACATATATATATGTATATATATATACATATATATA	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_5630:HG4_Ill_SVrefine2DISCOVARDovetail_6548:HG2_Ill_SVrefine2DISCOVARplusDovetail_12669:HG4_Ill_GATKHC_14903:HG4_Ill_GATKHCSBGrefine_6367:HG2_Ill_GATKHC_14845:HG2_Ill_GATKHCSBGrefine_6247:HG2_Ill_SpiralSDKrefine_16707:HG4_PB_pbsv_9249:HG4_Ill_scalpel_8532:HG4_Ill_manta_2235:HG2_Ill_scalpel_8770:HG2_Ill_manta_2611:HG2_PB_pbsv_9217;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6247:HG2_Ill_GATKHC_14845:HG4_Ill_GATKHCSBGrefine_6367:HG4_Ill_GATKHC_14903;NumExactMatchSVs=4;ClusterMaxShiftDist=0.314815;ClusterMaxSizeDiff=0.314815;ClusterMaxEditDist=0.319249;PBcalls=3;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-100;DistBack=-105;DistForward=-81;DistMin=-105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:13310934-13311034;PctSeqSimilarity=0.8824;PctSizeSimilarity=0.8621;PctRecOverlap=0.7863;SizeDiff=-16;StartDistance=25;EndDistance=9;GTMatch=0;TruScore=84;MatchId=3903.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:25:0|1:32:2:1:22:./.:0:0:0:0:0/1:42:6:./.:.:.:.:.:.
chr8	13594464	HG3_Ill_GATKHCSBGrefine_6169	TGACTTCATTCTTTTTCTTTTTTTTTTTTTTTTTTATTTTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_642:HG4_Ill_Krunchall_12974:HG3_Ill_Krunchall_12386:HG2_Ill_Krunchall_12705:HG2_PB_HySA_16555:HG2_PB_pbsv_9222:HG3_PB_pbsv_8997:HG4_PB_pbsv_9254:HG3_PB_HySA_13817:HG4_Ill_MetaSV_5237:HG3_Ill_MetaSV_5176:HG4_PB_SVrefine2PBcRDovetail_4557:HG4_PB_SVrefine2Falcon1Dovetail_5601:HG4_PB_HySA_13351:HG4_Ill_svaba_11642:HG4_Ill_scalpel_8537:HG4_Ill_SVrefine2DISCOVARDovetail_6553:HG4_Ill_GATKHCSBGrefine_6370:HG4_10X_allpass_1785:HG3_PB_assemblyticsfalcon_26055:HG3_PB_SVrefine2PBcRDovetail_4153:HG3_PB_SVrefine2Falcon1Dovetail_5634:HG3_Ill_svaba_11639:HG3_Ill_scalpel_8880:HG3_Ill_GATKHCSBGrefine_6169:HG3_10X_allpass_1830:HG2_PB_SVrefine2PBcRplusDovetail_10857:HG2_PB_SVrefine2PB10Xhap12_6756:HG2_PB_SVrefine2Falcon2Bionano_4498:HG2_PB_SVrefine2Falcon1plusDovetail_11660:HG2_Ill_svaba_11537:HG2_Ill_scalpel_8775:HG2_Ill_manta_2614:HG2_Ill_SpiralSDKrefine_16711:HG2_Ill_MetaSV_4999:HG2_Ill_GATKHCSBGrefine_6248:HG2_10X_allpass_1527:HG2_10X_SVrefine210Xhap12_6537:HG2_Ill_breakscan11_1331:HG4_Ill_Spiral_753:HG3_Ill_Spiral_9674;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6537:HG2_10X_allpass_1527:HG2_Ill_GATKHCSBGrefine_6248:HG2_Ill_MetaSV_4999:HG2_Ill_SpiralSDKrefine_16711:HG2_Ill_manta_2614:HG2_Ill_scalpel_8775:HG2_Ill_svaba_11537:HG2_PB_SVrefine2Falcon1plusDovetail_11660:HG2_PB_SVrefine2Falcon2Bionano_4498:HG2_PB_SVrefine2PB10Xhap12_6756:HG2_PB_SVrefine2PBcRplusDovetail_10857:HG3_10X_allpass_1830:HG3_Ill_GATKHCSBGrefine_6169:HG3_Ill_scalpel_8880:HG3_Ill_svaba_11639:HG3_PB_SVrefine2Falcon1Dovetail_5634:HG3_PB_SVrefine2PBcRDovetail_4153:HG3_PB_assemblyticsfalcon_26055:HG4_10X_allpass_1785:HG4_Ill_GATKHCSBGrefine_6370:HG4_Ill_SVrefine2DISCOVARDovetail_6553:HG4_Ill_scalpel_8537:HG4_Ill_svaba_11642:HG4_PB_HySA_13351:HG4_PB_SVrefine2Falcon1Dovetail_5601:HG4_PB_SVrefine2PBcRDovetail_4557;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0121212;ClusterMaxSizeDiff=0.0121212;ClusterMaxEditDist=0.0121951;PBcalls=15;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-164;DistBack=33172;DistForward=-147;DistMin=-147;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=8:13594465-13594646;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3904.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:0:29:0:28:./.:0:0:0:0:1/1:0:18:./.:.:.:.:.:.
chr8	13778059	HG2_10X_SVrefine210Xhap12_6538	TAAAGAAATTGGACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_9677:HG2_10X_allpass_1528:HG4_Ill_Krunchall_12979:HG3_PB_pbsv_8999:HG3_Ill_Krunchall_12391:HG2_PB_pbsv_9224:HG2_Ill_Krunchall_12712:HG2_PB_assemblyticsfalcon_26149:HG4_PB_assemblyticsfalcon_25590:HG3_PB_assemblyticsfalcon_26058:HG2_PB_assemblyticsPBcR_25352:HG2_Ill_Spiral_643:HG4_Ill_MetaSV_5238:HG3_PB_HySA_13821:HG3_Ill_MetaSV_5177:HG2_PB_HySA_16560:HG2_Ill_tnscope_1045:HG2_Ill_MetaSV_5000:HG4_PB_pbsv_9255:HG4_PB_SVrefine2PBcRDovetail_4558:HG4_PB_SVrefine2Falcon1Dovetail_5602:HG4_PB_HySA_13354:HG4_Ill_svaba_11647:HG4_Ill_scalpel_8542:HG4_Ill_manta_2238:HG4_Ill_SVrefine2DISCOVARDovetail_6554:HG4_Ill_GATKHCSBGrefine_6371:HG4_10X_allpass_1786:HG3_PB_SVrefine2PBcRDovetail_4154:HG3_PB_SVrefine2Falcon1Dovetail_5635:HG3_Ill_svaba_11643:HG3_Ill_scalpel_8883:HG3_Ill_manta_2133:HG3_Ill_SVrefine2DISCOVARDovetail_6742:HG3_Ill_GATKHCSBGrefine_6171:HG3_10X_allpass_1831:HG2_PB_SVrefine2PBcRplusDovetail_10858:HG2_PB_SVrefine2PB10Xhap12_6757:HG2_PB_SVrefine2Falcon2Bionano_4499:HG2_PB_SVrefine2Falcon1plusDovetail_11661:HG2_Ill_svaba_11542:HG2_Ill_scalpel_8779:HG2_Ill_manta_2615:HG2_Ill_SVrefine2DISCOVARplusDovetail_12676:HG2_Ill_GATKHCSBGrefine_6250:HG2_10X_SVrefine210Xhap12_6538:HG2_Ill_breakscan11_1332:HG4_Ill_Spiral_754;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6538:HG2_Ill_GATKHCSBGrefine_6250:HG2_Ill_SVrefine2DISCOVARplusDovetail_12676:HG2_Ill_manta_2615:HG2_Ill_scalpel_8779:HG2_Ill_svaba_11542:HG2_PB_SVrefine2Falcon1plusDovetail_11661:HG2_PB_SVrefine2Falcon2Bionano_4499:HG2_PB_SVrefine2PB10Xhap12_6757:HG2_PB_SVrefine2PBcRplusDovetail_10858:HG3_10X_allpass_1831:HG3_Ill_GATKHCSBGrefine_6171:HG3_Ill_SVrefine2DISCOVARDovetail_6742:HG3_Ill_manta_2133:HG3_Ill_scalpel_8883:HG3_Ill_svaba_11643:HG3_PB_SVrefine2Falcon1Dovetail_5635:HG3_PB_SVrefine2PBcRDovetail_4154:HG4_10X_allpass_1786:HG4_Ill_GATKHCSBGrefine_6371:HG4_Ill_SVrefine2DISCOVARDovetail_6554:HG4_Ill_manta_2238:HG4_Ill_scalpel_8542:HG4_Ill_svaba_11647:HG4_PB_HySA_13354:HG4_PB_SVrefine2Falcon1Dovetail_5602:HG4_PB_SVrefine2PBcRDovetail_4558:HG4_PB_pbsv_9255;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0841122;ClusterMaxSizeDiff=0.0841122;ClusterMaxEditDist=0.0841122;PBcalls=18;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=740;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:13778060-13778399;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3905.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:79:1/1:4:45:0:44:./.:0:0:0:0:1/1:0:35:./.:2:20:.:.:.
chr8	15001266	HG3_Ill_SVrefine2DISCOVARDovetail_6748	TCTATTATTACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1333:HG4_PB_assemblyticsfalcon_25603:HG3_PB_assemblyticsfalcon_26070:HG2_PB_assemblyticsPBcR_25363:HG2_PB_assemblyticsfalcon_26165:HG4_Ill_Krunchall_12998:HG2_Ill_Krunchall_12734:HG2_PB_HySA_16577:HG3_PB_pbsv_9003:HG4_Ill_MetaSV_5240:HG3_Ill_MetaSV_5178:HG2_PB_HySA_16576:HG2_Ill_tnscope_1046:HG2_Ill_MetaSV_5003:HG4_PB_pbsv_9264:HG4_PB_SVrefine2PBcRDovetail_4566:HG4_PB_SVrefine2Falcon1Dovetail_5608:HG4_Ill_svaba_11668:HG4_Ill_scalpel_8557:HG4_Ill_manta_2241:HG4_Ill_SVrefine2DISCOVARDovetail_6561:HG4_Ill_GATKHCSBGrefine_6377:HG3_PB_SVrefine2PBcRDovetail_4158:HG3_PB_SVrefine2Falcon1Dovetail_5639:HG3_PB_HySA_13834:HG3_Ill_svaba_11662:HG3_Ill_scalpel_8895:HG3_Ill_manta_2135:HG3_Ill_SVrefine2DISCOVARDovetail_6748:HG3_Ill_GATKHCSBGrefine_6174:HG3_10X_allpass_1833:HG2_PB_pbsv_9229:HG2_PB_SVrefine2PBcRplusDovetail_10862:HG2_PB_SVrefine2PB10Xhap12_6761:HG2_PB_SVrefine2Falcon2Bionano_4503:HG2_PB_SVrefine2Falcon1plusDovetail_11666:HG2_Ill_svaba_11562:HG2_Ill_scalpel_8792:HG2_Ill_manta_2617:HG2_Ill_SVrefine2DISCOVARplusDovetail_12683:HG2_Ill_GATKHCSBGrefine_6256:HG2_10X_allpass_1529:HG2_10X_SVrefine210Xhap12_6548;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6548:HG2_10X_allpass_1529:HG2_Ill_GATKHCSBGrefine_6256:HG2_Ill_SVrefine2DISCOVARplusDovetail_12683:HG2_Ill_manta_2617:HG2_Ill_scalpel_8792:HG2_Ill_svaba_11562:HG2_PB_SVrefine2Falcon1plusDovetail_11666:HG2_PB_SVrefine2Falcon2Bionano_4503:HG2_PB_SVrefine2PB10Xhap12_6761:HG2_PB_SVrefine2PBcRplusDovetail_10862:HG2_PB_pbsv_9229:HG3_10X_allpass_1833:HG3_Ill_GATKHCSBGrefine_6174:HG3_Ill_SVrefine2DISCOVARDovetail_6748:HG3_Ill_manta_2135:HG3_Ill_scalpel_8895:HG3_Ill_svaba_11662:HG3_PB_HySA_13834:HG3_PB_SVrefine2Falcon1Dovetail_5639:HG3_PB_SVrefine2PBcRDovetail_4158:HG4_Ill_GATKHCSBGrefine_6377:HG4_Ill_SVrefine2DISCOVARDovetail_6561:HG4_Ill_manta_2241:HG4_Ill_scalpel_8557:HG4_Ill_svaba_11668:HG4_PB_SVrefine2Falcon1Dovetail_5608:HG4_PB_SVrefine2PBcRDovetail_4566:HG4_PB_pbsv_9264;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0793651;ClusterMaxSizeDiff=0.0793651;ClusterMaxEditDist=0.0793651;PBcalls=18;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=45857;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=8:15001267-15001599;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3906.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:0:23:1:26:./.:0:0:0:0:1/1:0:53:./.:2:10:.:.:.
chr8	15053390	HG4_Ill_SVrefine2DISCOVARDovetail_6563	TAGGCTTCGATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_26166:HG4_PB_assemblyticsfalcon_25604:HG3_PB_assemblyticsfalcon_26071:HG4_Ill_Krunchall_12999:HG2_Ill_Krunchall_12735:HG4_PB_HySA_13371:HG2_Ill_Spiral_644:HG2_PB_pbsv_9230:HG4_PB_pbsv_9265:HG4_Ill_MetaSV_5241:HG2_Ill_tnscope_1047:HG2_Ill_MetaSV_5004:HG4_PB_SVrefine2PBcRDovetail_4567:HG4_PB_SVrefine2Falcon1Dovetail_5609:HG4_Ill_scalpel_8558:HG4_Ill_manta_2242:HG4_Ill_SVrefine2DISCOVARDovetail_6563:HG4_Ill_GATKHCSBGrefine_6378:HG3_PB_SVrefine2Falcon1Dovetail_5640:HG2_PB_SVrefine2PB10Xhap12_6762:HG2_PB_SVrefine2Falcon2Bionano_4504:HG2_PB_SVrefine2Falcon1plusDovetail_11667:HG2_Ill_scalpel_8793:HG2_Ill_manta_2618:HG2_Ill_breakscan11_1334:HG2_Ill_SVrefine2DISCOVARplusDovetail_12686:HG2_Ill_GATKHCSBGrefine_6257:HG2_10X_SVrefine210Xhap12_6549:HG4_Ill_Spiral_755;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6549:HG2_Ill_GATKHCSBGrefine_6257:HG2_Ill_SVrefine2DISCOVARplusDovetail_12686:HG2_Ill_breakscan11_1334:HG2_Ill_manta_2618:HG2_Ill_scalpel_8793:HG2_PB_SVrefine2Falcon1plusDovetail_11667:HG2_PB_SVrefine2Falcon2Bionano_4504:HG2_PB_SVrefine2PB10Xhap12_6762:HG3_PB_SVrefine2Falcon1Dovetail_5640:HG4_Ill_GATKHCSBGrefine_6378:HG4_Ill_SVrefine2DISCOVARDovetail_6563:HG4_Ill_manta_2242:HG4_Ill_scalpel_8558:HG4_PB_SVrefine2Falcon1Dovetail_5609:HG4_PB_SVrefine2PBcRDovetail_4567;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0938511;ClusterMaxSizeDiff=0.0938511;ClusterMaxEditDist=0.0938511;PBcalls=12;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=9618;DistForward=-315;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:15053391-15053720;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3907.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:34:0|1:48:3:4:27:./.:0:0:0:0:0/1:32:22:0/1:17:8:.:.:.
chr8	15892153	HG3_Ill_manta_2137	CCTTAAATGTAAATGGGCTAAATGCTCCAATTAAAAGGCACAGACTGGCAAATTGGATAGAGTCAAGACCCATCAGTGTGCGGTATTCAGGAAATCCATCTCACGTGCAGAGACACACATAGGCACAAAACAAAGTGATGGAGGAAGATCTACCAAGCAAGTGGAAAACAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_9236:HG3_PB_HySA_13843:HG2_Ill_MetaSV_5007:HG3_PB_assemblyticsfalcon_26081:HG3_PB_SVrefine2Falcon1Dovetail_5645:HG3_Ill_svaba_11671:HG3_Ill_scalpel_8902:HG3_Ill_manta_2137:HG3_Ill_GATKHCSBGrefine_6177:HG3_10X_allpass_1835:HG2_Ill_svaba_11569:HG2_Ill_scalpel_8800:HG2_Ill_GATKHCSBGrefine_6260:HG2_10X_allpass_1530:HG2_10X_SVrefine210Xhap12_6553:HG3_Ill_Krunchall_12415:HG2_Ill_Krunchall_12742:HG3_PB_pbsv_9007;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6553:HG2_10X_allpass_1530:HG2_Ill_GATKHCSBGrefine_6260:HG2_Ill_scalpel_8800:HG2_Ill_svaba_11569:HG3_10X_allpass_1835:HG3_Ill_GATKHCSBGrefine_6177:HG3_Ill_manta_2137:HG3_Ill_scalpel_8902:HG3_Ill_svaba_11671:HG3_PB_SVrefine2Falcon1Dovetail_5645:HG3_PB_assemblyticsfalcon_26081;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00938967;ClusterMaxSizeDiff=0.00934579;ClusterMaxEditDist=0.0327103;PBcalls=5;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-213;DistBack=-197;DistForward=-213;DistMin=-213;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:15892154-15892366;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3908.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:25:./.:7:19:21:4:./.:0:0:0:0:0/1:31:22:./.:.:.:.:.:.
chr8	16685924	HG2_Ill_manta_2621	GAGTTAACATATATATATAACATATATATGTTATATATAAAGTTAACATATAT	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11686:HG4_Ill_Krunchall_13020:HG3_PB_pbsv_9015:HG2_PB_pbsv_9244:HG4_PB_HySA_13396:HG3_PB_HySA_13857:HG2_PB_HySA_16607:HG4_PB_pbsv_9278:HG4_PB_assemblyticsfalcon_25621:HG4_Ill_svaba_11680:HG4_Ill_scalpel_8576:HG4_Ill_manta_2245:HG4_Ill_Krunchall_13019:HG4_Ill_GATKHC_14958:HG4_Ill_GATKHCSBGrefine_6387:HG4_Ill_250bpfermikitraw_12383:HG4_Ill_150bpfermikitraw_11866:HG3_PB_assemblyticsfalcon_26091:HG3_Ill_svaba_11678:HG3_Ill_scalpel_8908:HG3_Ill_manta_2139:HG3_Ill_Krunchall_12425:HG3_Ill_GATKHC_14860:HG3_Ill_GATKHCSBGrefine_6180:HG3_Ill_250bpfermikitraw_12079:HG3_Ill_150bpfermikitraw_11735:HG2_PB_assemblyticsfalcon_26184:HG2_PB_assemblyticsPBcR_25381:HG2_Ill_svaba_11576:HG2_Ill_manta_2621:HG2_Ill_SpiralSDKrefine_16734:HG2_Ill_Krunchall_12749:HG2_Ill_GATKHC_14900:HG2_Ill_GATKHCSBGrefine_6265:HG2_Ill_250bpfermikitraw_12438;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11686:HG4_PB_pbsv_9278:HG4_PB_assemblyticsfalcon_25621:HG4_Ill_svaba_11680:HG4_Ill_scalpel_8576:HG4_Ill_manta_2245:HG4_Ill_Krunchall_13019:HG4_Ill_GATKHC_14958:HG4_Ill_GATKHCSBGrefine_6387:HG4_Ill_250bpfermikitraw_12383:HG4_Ill_150bpfermikitraw_11866:HG3_PB_assemblyticsfalcon_26091:HG3_Ill_svaba_11678:HG3_Ill_scalpel_8908:HG3_Ill_manta_2139:HG3_Ill_Krunchall_12425:HG3_Ill_GATKHC_14860:HG3_Ill_GATKHCSBGrefine_6180:HG3_Ill_250bpfermikitraw_12079:HG3_Ill_150bpfermikitraw_11735:HG2_PB_assemblyticsfalcon_26184:HG2_PB_assemblyticsPBcR_25381:HG2_Ill_svaba_11576:HG2_Ill_manta_2621:HG2_Ill_SpiralSDKrefine_16734:HG2_Ill_Krunchall_12749:HG2_Ill_GATKHC_14900:HG2_Ill_GATKHCSBGrefine_6265:HG2_Ill_250bpfermikitraw_12438;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0384615;PBcalls=10;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=19383;DistForward=100877;DistMin=19383;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=8:16685919-16686007;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3909.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:1:9:2:43:./.:0:0:0:0:1/1:0:41:./.:.:.:.:.:.
chr8	16821879	HG2_PB_assemblyticsPBcR_25382	GGGACACCATGTGACCATGTGGCTAGAATTTTCCATGTTGACCTTAATGCTATCATATCCACCAGCTCAGCTAGGCTCAGCCTGCATGTCATGCACCACTGTTGCGCCAACACCTCTTCCTCATCTCACTCCTATGGCCCAGCAGGGGAATCCCTGAGGACTAGCTGACAGATGATCAAAGTGCCCAAGACTGGTTTACAGACAGGTCAGCTCAGTATGTGGATATAAGGCACTACAGTCTAACTCACAGACAATTATTTCAATTGACAAAGTTTGGGGCAGTACATTTGCCATCCCCTTTGGGTAATAAAAGAAGTAGTCTGAGATTAGAACATATAAGGACTCCTGGGCAGTGGCAAATGGAATGGCTA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_9245:HG2_10X_allpass_1533:HG3_PB_HySA_13858:HG3_PB_SVrefine2PBcRDovetail_4166:HG3_Ill_manta_2140:HG3_Ill_SVrefine2DISCOVARDovetail_6759:HG3_Ill_GATKHCSBGrefine_6181:HG3_10X_allpass_1837:HG2_PB_assemblyticsfalcon_26185:HG2_PB_assemblyticsPBcR_25382:HG2_PB_SVrefine2PBcRplusDovetail_10870:HG2_PB_SVrefine2PB10Xhap12_6772:HG2_PB_SVrefine2Falcon1plusDovetail_11676:HG2_Ill_SpiralSDKrefine_16735:HG2_Ill_MetaSV_5010:HG2_Ill_GATKHCSBGrefine_6266:HG2_10X_SVrefine210Xhap12_6558:HG3_Ill_Krunchall_12426:HG2_Ill_Krunchall_12750:HG3_Ill_Spiral_9701:HG3_Ill_MetaSV_5183:HG2_PB_HySA_16608:HG2_Ill_tnscope_1048:HG2_Ill_Spiral_646:HG3_PB_pbsv_9016;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6558:HG2_Ill_GATKHCSBGrefine_6266:HG2_Ill_MetaSV_5010:HG2_Ill_SpiralSDKrefine_16735:HG2_PB_SVrefine2Falcon1plusDovetail_11676:HG2_PB_SVrefine2PB10Xhap12_6772:HG2_PB_SVrefine2PBcRplusDovetail_10870:HG2_PB_assemblyticsPBcR_25382:HG2_PB_assemblyticsfalcon_26185:HG3_10X_allpass_1837:HG3_Ill_GATKHCSBGrefine_6181:HG3_Ill_SVrefine2DISCOVARDovetail_6759:HG3_Ill_manta_2140:HG3_PB_SVrefine2PBcRDovetail_4166;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0296896;ClusterMaxSizeDiff=0.0296896;ClusterMaxEditDist=0.0296896;PBcalls=10;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-370;DistBack=35024;DistForward=-370;DistMin=-370;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:16821880-16822250;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3910.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:34:1|0:5:37:35:1:./.:0:0:0:0:0/1:46:17:0/1:50:6:.:.:.
chr8	17410021	HG2_Ill_150bpfermikitraw_11690	TAGCACCAATCAGAGTGAAGTTGGTCTAGAAATAGAAATTATCATTCTTAAATAAATGGTGGAAATTCATATAAATATGTGAAGGGA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_647:HG4_PB_pbsv_9280:HG2_PB_assemblyticsfalcon_26188:HG4_PB_assemblyticsfalcon_25628:HG4_PB_HySA_13401:HG2_PB_HySA_16612:HG3_PB_pbsv_9021:HG2_PB_pbsv_9246:HG3_PB_HySA_13863:HG4_Ill_svaba_11684:HG4_Ill_scalpel_8580:HG4_Ill_GATKHCSBGrefine_6389:HG4_Ill_250bpfermikitraw_12386:HG4_Ill_150bpfermikitraw_11870:HG3_PB_assemblyticsfalcon_26096:HG3_Ill_svaba_11682:HG3_Ill_scalpel_8910:HG3_Ill_GATKHCSBGrefine_6184:HG3_Ill_250bpfermikitraw_12084:HG3_Ill_150bpfermikitraw_11738:HG2_PB_assemblyticsPBcR_25384:HG2_Ill_svaba_11579:HG2_Ill_scalpel_8809:HG2_Ill_manta_2622:HG2_Ill_SpiralSDKrefine_16737:HG2_Ill_GATKHCSBGrefine_6267:HG2_Ill_250bpfermikitraw_12442:HG2_Ill_150bpfermikitraw_11690:HG4_Ill_Spiral_757:HG3_Ill_Spiral_9705;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11690:HG2_Ill_250bpfermikitraw_12442:HG2_Ill_GATKHCSBGrefine_6267:HG2_Ill_SpiralSDKrefine_16737:HG2_Ill_manta_2622:HG2_Ill_scalpel_8809:HG2_Ill_svaba_11579:HG2_PB_assemblyticsPBcR_25384:HG3_Ill_150bpfermikitraw_11738:HG3_Ill_250bpfermikitraw_12084:HG3_Ill_GATKHCSBGrefine_6184:HG3_Ill_scalpel_8910:HG3_Ill_svaba_11682:HG3_PB_assemblyticsfalcon_26096:HG4_Ill_150bpfermikitraw_11870:HG4_Ill_250bpfermikitraw_12386:HG4_Ill_GATKHCSBGrefine_6389:HG4_Ill_scalpel_8580:HG4_Ill_svaba_11684;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0346821;ClusterMaxSizeDiff=0.0346821;ClusterMaxEditDist=0.0350877;PBcalls=10;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-86;DistBack=23138;DistForward=25434;DistMin=23138;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=87;REFWIDENED=8:17410022-17410194;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3911.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:58:1/1:2:23:1:12:./.:0:0:0:0:1/1:0:40:./.:.:.:.:.:.
chr8	17732990	HG3_Ill_GATKHC_14873	CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_9025:HG4_Ill_Krunchall_13029:HG3_Ill_Krunchall_12436:HG2_Ill_Krunchall_12762:HG4_PB_pbsv_9286:HG4_PB_SVrefine2PBcRDovetail_4577:HG4_Ill_manta_2249:HG2_PB_SVrefine2PBcRplusDovetail_10872:HG2_PB_SVrefine2PB10Xhap12_6775:HG2_PB_SVrefine2Falcon1plusDovetail_11680:HG2_Ill_manta_2625:HG2_Ill_SVrefine2DISCOVARplusDovetail_12701:HG2_10X_SVrefine210Xhap12_6562:HG4_Ill_Spiral_758:HG3_Ill_Spiral_9709:HG2_Ill_Spiral_648:HG2_Ill_SpiralSDKrefine_16740:HG2_PB_assemblyticsfalcon_26197:HG4_Ill_svaba_11691:HG4_Ill_GATKHC_14969:HG4_Ill_GATKHCSBGrefine_6393:HG4_10X_allpass_1790:HG3_Ill_svaba_11686:HG3_Ill_GATKHC_14873:HG3_Ill_GATKHCSBGrefine_6188:HG3_10X_allpass_1839:HG2_PB_HySA_16620:HG2_Ill_svaba_11586:HG2_Ill_GATKHC_14913:HG2_Ill_GATKHCSBGrefine_6274:HG2_10X_allpass_1534:HG2_PB_pbsv_9253;NumClusterSVs=32;ExactMatchIDs=HG2_10X_allpass_1534:HG2_Ill_GATKHCSBGrefine_6274:HG2_Ill_GATKHC_14913:HG2_Ill_svaba_11586:HG2_PB_HySA_16620:HG3_10X_allpass_1839:HG3_Ill_GATKHCSBGrefine_6188:HG3_Ill_GATKHC_14873:HG3_Ill_svaba_11686:HG4_10X_allpass_1790:HG4_Ill_GATKHCSBGrefine_6393:HG4_Ill_GATKHC_14969:HG4_Ill_svaba_11691;NumExactMatchSVs=13;ClusterMaxShiftDist=0.147186;ClusterMaxSizeDiff=0.147186;ClusterMaxEditDist=0.17316;PBcalls=9;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-106;DistBack=3162;DistForward=-105;DistMin=-105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=29;REFWIDENED=8:17732991-17733125;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3912.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:67:1/1:4:23:2:36:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr8	18427144	HG2_PB_SVrefine2PB10Xhap12_6778	TTAAGTTTTCGGGTACATGTGCACATTGTGCAGGTTACTTACATACGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCGATGCTATCCCTCCCCACTCCCCCGACCCCACAACAGTCCCCAGAGTGTGACATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAGTTCCCACCTATGAGTGAGAATATGT	GCTCATG	20	PASS	ClusterIDs=HG4_PB_pbsv_9289:HG4_PB_SVrefine2PBcRDovetail_4578:HG4_PB_SVrefine2Falcon1Dovetail_5620:HG3_PB_assemblyticsfalcon_26105:HG3_PB_SVrefine2PBcRDovetail_4171:HG2_PB_SVrefine2PBcRplusDovetail_10874:HG2_PB_SVrefine2PB10Xhap12_6778:HG2_PB_SVrefine2Falcon1plusDovetail_11682:HG2_PB_PB10Xdip_29779:HG2_PB_PB10Xdip_29778:HG2_10X_SVrefine210Xhap12_6565:HG4_PB_assemblyticsfalcon_25638:HG2_PB_assemblyticsfalcon_26203:HG2_PB_assemblyticsPBcR_25393:HG2_PB_pbsv_9256:HG3_PB_pbsv_9028:HG2_Ill_SpiralSDKrefine_16748;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6565:HG2_PB_PB10Xdip_29778:HG2_PB_PB10Xdip_29779:HG2_PB_SVrefine2Falcon1plusDovetail_11682:HG2_PB_SVrefine2PB10Xhap12_6778:HG2_PB_SVrefine2PBcRplusDovetail_10874:HG3_PB_SVrefine2PBcRDovetail_4171:HG3_PB_assemblyticsfalcon_26105:HG4_PB_SVrefine2Falcon1Dovetail_5620:HG4_PB_SVrefine2PBcRDovetail_4578;NumExactMatchSVs=10;ClusterMaxShiftDist=0.013544;ClusterMaxSizeDiff=0.013544;ClusterMaxEditDist=0.0493274;PBcalls=15;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-219;DistBack=47717;DistForward=-163;DistMin=-163;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:18427144-18427369;PctSeqSimilarity=0.9649;PctSizeSimilarity=0.991;PctRecOverlap=0.9779;SizeDiff=-2;StartDistance=1;EndDistance=5;GTMatch=0;TruScore=97;MatchId=3913.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:0:32:1:21:./.:0:0:0:0:1/1:0:8:./.:.:.:.:.:.
chr8	18454611	HG2_Ill_GATKHCSBGrefine_6281	TAAAAGGATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAACAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTATTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1337:HG3_10X_allpass_1840:HG2_10X_allpass_1536:HG4_10X_allpass_1792:HG4_PB_assemblyticsfalcon_25640:HG2_PB_assemblyticsPBcR_25394:HG3_PB_assemblyticsfalcon_26107:HG4_Ill_Krunchall_13037:HG3_Ill_Krunchall_12443:HG2_Ill_Krunchall_12771:HG2_Ill_tnscope_1050:HG4_PB_SVrefine2PBcRDovetail_4579:HG4_Ill_MetaSV_5249:HG3_PB_pbsv_9029:HG3_Ill_SVrefine2DISCOVARDovetail_6766:HG3_Ill_MetaSV_5187:HG3_Ill_GATKHCSBGrefine_6194:HG2_PB_pbsv_9257:HG2_PB_assemblyticsfalcon_26204:HG2_PB_SVrefine2PBcRplusDovetail_10875:HG2_PB_SVrefine2PB10Xhap12_6780:HG2_PB_SVrefine2Falcon1plusDovetail_11683:HG2_Ill_MetaSV_5015:HG2_Ill_GATKHCSBGrefine_6281:HG2_10X_SVrefine210Xhap12_6566:HG4_PB_pbsv_9290;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6566:HG2_Ill_GATKHCSBGrefine_6281:HG2_Ill_MetaSV_5015:HG2_PB_SVrefine2Falcon1plusDovetail_11683:HG2_PB_SVrefine2PB10Xhap12_6780:HG2_PB_SVrefine2PBcRplusDovetail_10875:HG2_PB_assemblyticsfalcon_26204:HG2_PB_pbsv_9257:HG3_Ill_GATKHCSBGrefine_6194:HG3_Ill_MetaSV_5187:HG3_Ill_SVrefine2DISCOVARDovetail_6766:HG3_PB_pbsv_9029:HG4_Ill_MetaSV_5249:HG4_PB_SVrefine2PBcRDovetail_4579;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0128157;ClusterMaxSizeDiff=0.0128157;ClusterMaxEditDist=0.0128157;PBcalls=11;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1333;DistBack=-309;DistForward=-1024;DistMin=-1024;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=8:18454612-18455953;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3914.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:35:0|1:24:0:3:36:./.:0:0:0:0:0/1:35:13:0/1:94:55:1494:.:.
chr8	18651451	HG2_Ill_MetaSV_5016	TATGAAGCTGTGGGGAAAAGCAAGAGAGATCAGATTGTTACTGTGTCTGTGTAGAAAGAAGTAGACATAGGAGACTCCATTTTGTTATGTGCTAAGAAAAATTCTTCTGCCTTGAGATTCTGTTAATCTATAACCTTACCCCCAACCCTGTGCTCTCTGAAACGTGTGCTGTGTCAACTCAGAGTTGAATGGATTAAGGGCGGTGCAGGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCCTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAAAACTGCGGAAGGCCGCAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGTCTGAAATATGGCCTCGTGGGAAGGGAAAGACCTGACCGTCCCCCAGCCCGACACCCGTAAAGGGTCTGTGCTGAGGAGGATTAGTAAAAGAGGAAGGAATGTCTCTTGCAGTTGAGACAAGAGGAAGGCATCTGTCTCCTGCCTGTCCCTGGGCAATGGAATGTCTCGGTATAAAACCCGATTGTATGCTCCATCTACTGAGATAGGGAAAAACCGCCTTAGGGCTGGAGGTGGGACCTGCGGGCAGCAATACTGCTTTGTAAAGCATTGAGATGTTTATGTGTATGCATATCTAAAAGCACAGCACTTAATCCTTTACATTGTCTATGATGCCAAGACCTTTGTTCACGTGTTTGTCTGCTGACCCTCTCCCCACAATTGTCTTGTGACCCTGACACATCCCCCTCTTTGAGAAACACCCACAGATGATCAATAAATACTAAGGGAACTCAGAGGCTGGCGGGATCCTCCATATGCTGAACGCTGGTTCCCCGGGTCCCCTTATTTCTTTCTCTATACTTTGTCTCTGTGTCTTTTTCTTTTCCAAATCTCGCGTCCCACCTTACGAGAAACACCCACAGGTGTGTAGGGGCAACCCACCCCTAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6568:HG4_Ill_Krunchall_13039:HG3_Ill_Krunchall_12445:HG2_Ill_Krunchall_12773:HG4_PB_assemblyticsfalcon_25642:HG2_PB_assemblyticsfalcon_26207:HG2_PB_assemblyticsPBcR_25395:HG3_PB_assemblyticsfalcon_26108:HG2_Ill_tnscope_1051:HG4_PB_pbsv_9292:HG4_PB_SVrefine2PBcRDovetail_4580:HG4_Ill_manta_2251:HG4_Ill_SVrefine2DISCOVARDovetail_6577:HG4_Ill_MetaSV_5250:HG4_Ill_GATKHCSBGrefine_6397:HG4_10X_allpass_1793:HG3_PB_pbsv_9030:HG3_Ill_manta_2143:HG3_Ill_SVrefine2DISCOVARDovetail_6767:HG3_Ill_MetaSV_5188:HG3_Ill_GATKHCSBGrefine_6195:HG3_10X_allpass_1841:HG2_PB_pbsv_9259:HG2_PB_SVrefine2PBcRplusDovetail_10876:HG2_PB_SVrefine2PB10Xhap12_6781:HG2_Ill_manta_2627:HG2_Ill_SpiralSDKrefine_16751:HG2_Ill_SVrefine2DISCOVARplusDovetail_12702:HG2_Ill_MetaSV_5016:HG2_Ill_GATKHCSBGrefine_6282:HG2_10X_allpass_1537;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6568:HG4_PB_pbsv_9292:HG4_PB_SVrefine2PBcRDovetail_4580:HG4_Ill_manta_2251:HG4_Ill_SVrefine2DISCOVARDovetail_6577:HG4_Ill_MetaSV_5250:HG4_Ill_GATKHCSBGrefine_6397:HG4_10X_allpass_1793:HG3_PB_pbsv_9030:HG3_Ill_manta_2143:HG3_Ill_SVrefine2DISCOVARDovetail_6767:HG3_Ill_MetaSV_5188:HG3_Ill_GATKHCSBGrefine_6195:HG3_10X_allpass_1841:HG2_PB_pbsv_9259:HG2_PB_SVrefine2PBcRplusDovetail_10876:HG2_PB_SVrefine2PB10Xhap12_6781:HG2_Ill_manta_2627:HG2_Ill_SpiralSDKrefine_16751:HG2_Ill_SVrefine2DISCOVARplusDovetail_12702:HG2_Ill_MetaSV_5016:HG2_Ill_GATKHCSBGrefine_6282:HG2_10X_allpass_1537;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0133676;ClusterMaxSizeDiff=0.0133676;ClusterMaxEditDist=0.0133676;PBcalls=10;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-974;DistBack=17578;DistForward=-968;DistMin=-968;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=8:18651452-18652432;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3915.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:34:0:29:./.:0:0:0:0:1/1:0:28:1/1:2:49:.:.:.
chr8	19146693	HG3_Ill_svaba_11700	GAGGGAAGGGGATTGGAGCGGGGAAGGGGATTGGAGGGAGGGAAGGGGATTGGAGGC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_11712:HG2_PB_assemblyticsPBcR_25399:HG2_PB_PB10Xdip_29788:HG3_PB_pbsv_9036:HG3_Ill_svaba_11700:HG3_Ill_scalpel_8922:HG3_Ill_manta_2145:HG3_Ill_Krunchall_12450:HG3_Ill_GATKHC_14889:HG3_Ill_GATKHCSBGrefine_6201:HG3_Ill_250bpfermikitraw_12104:HG2_PB_pbsv_9264:HG2_Ill_svaba_11599:HG2_Ill_scalpel_8825:HG2_Ill_Krunchall_12777:HG2_Ill_GATKHC_14929:HG2_Ill_GATKHCSBGrefine_6287:HG2_Ill_250bpfermikitraw_12465;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11712:HG3_PB_pbsv_9036:HG3_Ill_svaba_11700:HG3_Ill_scalpel_8922:HG3_Ill_manta_2145:HG3_Ill_Krunchall_12450:HG3_Ill_GATKHC_14889:HG3_Ill_GATKHCSBGrefine_6201:HG3_Ill_250bpfermikitraw_12104:HG2_PB_pbsv_9264:HG2_Ill_svaba_11599:HG2_Ill_scalpel_8825:HG2_Ill_Krunchall_12777:HG2_Ill_GATKHC_14929:HG2_Ill_GATKHCSBGrefine_6287:HG2_Ill_250bpfermikitraw_12465;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0884956;ClusterMaxSizeDiff=0.0884956;ClusterMaxEditDist=0.106195;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=-64;DistForward=-49;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:19146692-19146764;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3916.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:./.:20:17:4:20:./.:0:0:0:0:0/1:17:17:./.:.:.:.:.:.
chr8	19244419	HG4_PB_SVrefine2PBcRDovetail_4583	CAGCTGGGAATGCAGGTGTATACCACCACACCCAGATGATACTTTTTGTTGTTCTTTGTAGAGATGGGGTCTTGCCAAGCTGGAAATGCAGGTGTATACCACCACACCCAGCTAATAGTTTTTGTTGTTCTTTGTAGAGATGGGGTCTTGCCA	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12706:HG3_PB_HySA_13878:HG2_PB_PB10Xdip_29789:HG2_PB_pbsv_9265:HG4_PB_pbsv_9295:HG3_PB_pbsv_9037:HG4_PB_SVrefine2PBcRDovetail_4583:HG4_PB_SVrefine2Falcon1Dovetail_5623:HG2_PB_SVrefine2PBcRplusDovetail_10879:HG2_PB_SVrefine2PB10Xhap12_6784;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12706:HG4_PB_SVrefine2PBcRDovetail_4583:HG4_PB_SVrefine2Falcon1Dovetail_5623:HG2_PB_SVrefine2PBcRplusDovetail_10879:HG2_PB_SVrefine2PB10Xhap12_6784;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0130719;ClusterMaxSizeDiff=0.0130719;ClusterMaxEditDist=0.0521173;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-152;DistBack=4084;DistForward=-153;DistMin=-153;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=380;REFWIDENED=8:19244420-19244951;PctSeqSimilarity=0.9691;PctSizeSimilarity=1;PctRecOverlap=0.3725;SizeDiff=0;StartDistance=-96;EndDistance=-96;GTMatch=0;TruScore=78;MatchId=3917.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:64:1/1:5:35:2:27:./.:0:0:0:0:0/0:31:0:./.:.:.:.:.:.
chr8	19337273	HG2_Ill_150bpfermikitraw_11715	GAAAAAAAAAAAAAAAAAGATTCCTCTCCGTAGATCACACTAATGCCTGTCTTCAGGAAAGAACTTAGAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6573:HG4_PB_HySA_13428:HG2_PB_pbsv_9267:HG4_PB_pbsv_9298:HG3_PB_pbsv_9039:HG2_PB_HySA_16639:HG4_Ill_scalpel_8592:HG4_Ill_manta_2254:HG4_Ill_Krunchall_13044:HG4_Ill_GATKHCSBGrefine_6401:HG4_Ill_250bpfermikitraw_12407:HG4_Ill_150bpfermikitraw_11889:HG3_Ill_scalpel_8923:HG3_Ill_Krunchall_12452:HG3_Ill_GATKHCSBGrefine_6202:HG3_Ill_250bpfermikitraw_12106:HG3_Ill_150bpfermikitraw_11753:HG2_Ill_scalpel_8826:HG2_Ill_manta_2629:HG2_Ill_SpiralSDKrefine_16755:HG2_Ill_GATKHCSBGrefine_6289:HG2_Ill_250bpfermikitraw_12467:HG2_Ill_150bpfermikitraw_11715:HG4_Ill_svaba_11703:HG3_Ill_svaba_11701:HG2_Ill_svaba_11603:HG3_PB_HySA_13884:HG4_PB_SVrefine2Falcon1Dovetail_5625:HG4_Ill_SVrefine2DISCOVARDovetail_6582:HG3_Ill_SVrefine2DISCOVARDovetail_6769:HG2_PB_SVrefine2PBcRplusDovetail_10881:HG2_PB_SVrefine2PB10Xhap12_6786:HG2_Ill_SVrefine2DISCOVARplusDovetail_12707;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11715:HG2_Ill_250bpfermikitraw_12467:HG2_Ill_GATKHCSBGrefine_6289:HG2_Ill_SpiralSDKrefine_16755:HG2_Ill_manta_2629:HG2_Ill_scalpel_8826:HG3_Ill_150bpfermikitraw_11753:HG3_Ill_250bpfermikitraw_12106:HG3_Ill_GATKHCSBGrefine_6202:HG3_Ill_Krunchall_12452:HG3_Ill_scalpel_8923:HG4_Ill_150bpfermikitraw_11889:HG4_Ill_250bpfermikitraw_12407:HG4_Ill_GATKHCSBGrefine_6401:HG4_Ill_Krunchall_13044:HG4_Ill_manta_2254:HG4_Ill_scalpel_8592;NumExactMatchSVs=17;ClusterMaxShiftDist=0.057971;ClusterMaxSizeDiff=0.057971;ClusterMaxEditDist=0.0882353;PBcalls=9;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-69;DistBack=6;DistForward=-7;DistMin=-7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=8:19337268-19337407;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3918.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:34:1/1:0:12:2:24:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr8	20493272	HG2_Ill_GATKHC_14935	TTTACATTTATTTAATGTAAATGACGTTTACATTTATTTAATGTAAATGACGTTTACATTTATTTAATGTAAATGACGTTTACATTTATTTAATGTAAATGAC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_9301:HG3_Ill_Krunchall_12464:HG2_Ill_Krunchall_12783:HG3_PB_assemblyticsfalcon_26121:HG4_Ill_GATKHC_14991:HG4_Ill_GATKHCSBGrefine_6406:HG3_Ill_GATKHC_14900:HG3_Ill_GATKHCSBGrefine_6211:HG2_Ill_GATKHC_14935:HG2_Ill_GATKHCSBGrefine_6291:HG2_PB_SVrefine2PBcRplusDovetail_10883:HG2_PB_SVrefine2PB10Xhap12_6789:HG2_Ill_SVrefine2DISCOVARplusDovetail_12715:HG2_10X_SVrefine210Xhap12_6577:HG2_Ill_SpiralSDKrefine_16760:HG2_PB_assemblyticsfalcon_26221:HG2_PB_assemblyticsPBcR_25405:HG2_PB_HySA_16642:HG2_Ill_250bpfermikitraw_12475:HG2_Ill_150bpfermikitraw_11722:HG2_PB_pbsv_9269:HG3_PB_pbsv_9045;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6291:HG2_Ill_GATKHC_14935:HG3_Ill_GATKHCSBGrefine_6211:HG3_Ill_GATKHC_14900:HG4_Ill_GATKHCSBGrefine_6406:HG4_Ill_GATKHC_14991;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0287081;ClusterMaxSizeDiff=0.0287081;ClusterMaxEditDist=0.0483092;PBcalls=9;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=-102;DistBack=0;DistForward=44824;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:20493271-20493375;PctSeqSimilarity=0.987;PctSizeSimilarity=0.9808;PctRecOverlap=0.7429;SizeDiff=-2;StartDistance=27;EndDistance=25;GTMatch=0;TruScore=90;MatchId=3919.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:1/1:0:31:2:25:./.:0:0:0:0:0/1:13:25:./.:.:.:.:.:.
chr8	23407219	HG2_PB_pbsv_9283	GTCACTATCAAGTTAGAAGCCTTTGTGGGAAATCTGGCTTTGGTAGGATCTGGGAAATTTGGACCCCTCATTTGCCCCCTGGCATCTCTAAATTCCAGAGCCCAGCTTTGATGGGGCTTACATCCCCAGCTGTTAACCTGTGGGGTGGGCCCCAGACTGTGGCCAGGTGCATTGCGCTAGGGGAGACAGATCCACAGCAGGCAGAATTTGAGGAGGACTTAAAATACCTGCTTTGGGAGGCCAAGGCGGGCAGATCCCCTGAGGTCGGGAGTTTGAGACCAGCCTGACCAACATGGAGAAACCCTGTCTCTACTAAAAATACAAAATTAGTTGGGTGCGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGTGGTGAGCCGAGATCAAGCCACTGCACTCCAGCCTGGGCAACAAGAGCGAAATTCCGTTTCAAAAAAAAAAAAAAAAAAAACACAAAAAAACAAAAACCCGCTTTGTTACCTGCCTGTGGGTGGAATTGAGTTCATCTCTGAATCCGTGGTAGTCATTTATTGAGCACGTGTTTTAGTGAGCATGGCATGGCGCTGGCTCCGAGATCACAGTGCTGCCGCCCTCCT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6800:HG3_Ill_Krunchall_12488:HG2_Ill_Krunchall_12814:HG2_PB_assemblyticsfalcon_26245:HG2_PB_assemblyticsPBcR_25431:HG2_Ill_tnscope_1052:HG3_PB_SVrefine2Falcon1Dovetail_5660:HG3_Ill_manta_2149:HG3_Ill_MetaSV_5194:HG3_Ill_GATKHCSBGrefine_6216:HG3_10X_allpass_1846:HG2_PB_pbsv_9283:HG2_PB_SVrefine2PBcRplusDovetail_10892:HG2_PB_SVrefine2PB10Xhap12_6801:HG2_PB_SVrefine2Falcon1plusDovetail_11695:HG2_Ill_breakscan11_1339:HG2_Ill_SpiralSDKrefine_16778:HG2_Ill_GATKHCSBGrefine_6295:HG2_10X_allpass_1538:HG2_10X_SVrefine210Xhap12_6588:HG3_PB_pbsv_9060;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6588:HG2_10X_allpass_1538:HG2_Ill_GATKHCSBGrefine_6295:HG2_Ill_SpiralSDKrefine_16778:HG2_Ill_breakscan11_1339:HG2_PB_SVrefine2Falcon1plusDovetail_11695:HG2_PB_SVrefine2PB10Xhap12_6801:HG2_PB_SVrefine2PBcRplusDovetail_10892:HG2_PB_pbsv_9283:HG3_10X_allpass_1846:HG3_Ill_GATKHCSBGrefine_6216:HG3_Ill_MetaSV_5194:HG3_Ill_manta_2149:HG3_PB_SVrefine2Falcon1Dovetail_5660;NumExactMatchSVs=14;ClusterMaxShiftDist=0.186081;ClusterMaxSizeDiff=0.186081;ClusterMaxEditDist=0.186081;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-640;DistBack=3095;DistForward=-641;DistMin=-641;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=8:23407220-23407863;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3920.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:31:0|1:41:0:0:35:./.:0:0:0:0:0/1:45:16:0/1:47:9:.:.:.
chr8	25066678	HG2_PB_SVrefine2Falcon1plusDovetail_11702	AGGCTCAGAGCACATTAGCGCCGTCATCCCTGTCTGATGTTCTCACCACACGCAAGTTCGTGAATAATTAAATTGTTAGGAAGGGGAAAGTCATGCATGGCGGGTCTTGCCCGAGGCTCAGGCAGACACACAATGAGGTCGCTACTCTGGGAGCCCAGTGGTCCAGGATGCCAGTCTGGCAGTGCCAGGGAAGGATGCTTCCTTTCAATAAGCGAACATTGTGAGGGAGCGGGGTGGAGGCAAGAGACCGCTTAGAAATCAGCACATGTGAATTCTGCTTCAAACTCTGCCACTAACCAGCTATTTGACCTTCCAGAAGTTGCTTCTTCATCTATAATGAAGGATGATGCCAAGAGGATTTTAACTTTTTGAGAAATAAAGCTCCTTTGAGACTGTAATGAAAGCTGTGGATTCTTTCCACAGAAAATGGTGCATATGTCTGTCGATGACATTTCACATACAACTTTAGGAAGTTTAGAAATCTTTGGGGACTCAAGGATCCCAGCTTAAGAAGAAGTCTTGCATGAGATGATGTCTGAACTTTTTTTGTATCTCTACAATTGCATTTTTCTGAGACTTTGGATCTTGGAAGGAACCTAGAATGTCAGCTGGGCTCTCACTTCTACTCTCAACAAGAGGCAAGCCTGCCCTGCCAGCATTTCGTGCAGAAGGCGCAAGCAACATGGGAGCCTCCTGTGTTTTCCTCAAAAGACACCATACTTCTTTTTCATTAGAGACAGGGTCTCAGCCTCGCTCTGTTGCCTAGAGTGCAGTGGCGCCATGATCCTCCCCCCTCAGTCTCTTGAGCTGCTGGGACTACAGGCACATGCCACCATCCCCGGCTAATTATATATATATATATATATATATATAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCTGTCTATTTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCGAGTAGAGATGGGGCCTTGCTATTTTGTCCAGGCTAGTCTTGAACTCTTGGCCTCAAGCGATCCTCCTGCCTTGGGCTCCCAAAGTGCTGAGATTACAGGCATGAGACACTGCATCTGGCCCTCTATAACCTCTTGATGTGTGCATTCTAAGCGGGAAGAAACAGACAGCAAATGCACAGTATGTATAGCATGATGTCAGTGATCAGGGCTTTGAAAATATTGATGAAGCACAGTGATGCCATAGACAGTGATGGGGTGAGGTGCTGTTGTCGAGTTGGGATGGTCAGATAACGGCTCTGTGGAGGGGATATGTGGGAAAAGATGTGAATAAAAGAGGGATTGGGACCGGGCGCTGTGGCTCACACCTGTCATCCCAGCATTTTGGGAGGCCAAGGTGGATGGATCAGTTGAGGCCAAGAGTTCAAGACAAGCCTGCCCAACATGGAGAAACCCCATCTCTACTGAAAAATACAAAAATTAGCCAAGTGTGGTGACACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCATGAGAATTGCTTGAGCCTGGGAGGCAGAGGTTGCAGTGAGCTGAGGTGGCACCACTGCACTCCAGCCTAGGCGACAGATCAAGACTGTCTCCAAAACAAAAAAGAGGGACTGAGCCATGCAAATCTAAAGTAAGAACATTCTAGGCAGAAGATGTGGCACAGTTAAGGAGCAGTGGAAAGTGCCAATGTTCCTGGAGCTGAATGAGGGGAGGGGGAAGGGAGGAGGGAGAGGTGGGAGACAGGTTGAGAGACTGGCAGAGCTGAGGTTGGGGTAGTTCTTTGTCTACTGGAAACACAATTATCTGTACTCAAATGACATCTAATAATAATGGTTATTGATAAGCCACCCATTCATTTCATAGGCTTGGTTCATTACCAGCAATGGGCTGCTTTAATAAGACAGTGGTCCTCAAACCTCCTTCTGTCAACAGCACCTGGATAGCCTGCTTTGCAGAGTACCATTGGAATCAGATATCCCTGTCTTTAAGGAACTTACAGTACAGCAGAGGGGACAGGATGGTGTCTCCATTATTTTGTGCACATGGGAGAATTGCTGTGTCTCATAAGAGAAGCACAGAAAGTGCCAAATAGAGTTTCAGGAGAGGAAGTGAGTACTATCTATTGGAGAGGTCAGGAAGGCCCCAGGGAACAACTACGCCAGTTTTATCACCCATGCACTGGGGATGGTATTAGAACCTCCCACAGCATTGTATAGATAAACTGTTTGAGTGCCTAGAAAGCTTTCCACACAGGGCCTGGCACACACCTAGTAAGTGCTCAATAAAATATGGGCAAGCATTTGACTTGCGTCTTAAAGAAGGTTTACGATTTCTGAAATATAAAATGCTGTCTGTGGCCAGGCACAGTGGCTCATGCTTGTAATCCCAACACTTTGGGAGGCTGAGGCGGAAGGATCACTTGAGCCCAGGAGTTTGAGAGCAGCCTAGGCAACATAGAGAGACCACATCTCTGCAAAAACATTAAAAAATTAGTCTGGTGCAGTGGTGCATACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCGGGAGGATCGCTTGAGCCCAGGAGGTCAAGGCTACAGTGAGCTACTATCATGCTGCTGCACTCCAGCCTAGGCAACAGAGCAAGAGCCTATCTCTAAATAAATTAATTAATTAATAAATGCTATCTACGTAGTTTATCATGCAGATTTTTTAGAAATACAGCTTCCGCCGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATGGGCAGATCACAAGGTCAGGAGATCGACACCATATTGGCTAACACGGTGAATCCCTGTCTATACTGAAAATACAAAAAAATTAGCCAGGCATGGTGGCGGGCACCTGTAGTTCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGACGTGAACCTGGGAGGCAGAGTTTGCAGTGAGCCGAGATTATGCCACTGTTTTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGACAGCTTCCATGTAAAGAACTATTCAGGTCAAAATAGCTAGCTATTTTTTTTTAAATCTGGTTGTTTGCTTTATGAGTAGTCTTAATTAACAAGAGGATCAAGATTTTTCCAAATCTAAATCCATCTGTATAGCCTTGTTCAGGAAACATTTTGTTCTTGACTTTGGCTTGTGTTTGATACACTTGAACTGTCTGTGTTATTTATTGCTTCTTTAATTAGAGCAGCTTTTAAGGACCAACTGTGGGCCAACAGTGTGCTAAGGGCCACGGGCAAGTTTCATGTGGGGTCTTGAAAGAGCTTACATTCTAGTCGGGGAAATAAGAAGTATACACAAAAGTCAAATTATGTTGAGTCTTCATTATGTGGGTACCACCTAGGAAGGGGACTGGATGTACCTCTGCTCAAAACATCTGGATCCCATTTCACTTGCGAAGTCTGTTTTGAAAGGAAATATCCAGATGTGTCACGTGACTGTGACCAATTCATCTGAAGTAGCTAGAGAGTGTCTGAATAATTTTATTTCGATGCTTGCAAGAGAGAGGGTCGAAAACCCCTTTATGCTGGACTAGAGGAAAACCTCAGCAAGGGAGGTCTGTGTCAGGCCAGCGTGATTCTAGATGGGGCTGACACCATCCTCTACCCTCCCCAGCCATGGCAGGGAAATGCTCAGGAAATAGATTAAGGCACGAGGGCTTGGCGTGGCTTAATTGACCCCTGAGTTTTGACTGCCAAAACCCTGAATAAGGATGAATCTGCTGTTTGGAGAATATTCCCTGAGCAATTTAAAGGCTAGTTTCTGGGTTTGCAGAAAAAGGCAAGGTTCACTGTGAACGGAGTCTTGGAGGTTGCCTACAATGGTCATGGGTGGACGAGTTTGTTGGAAAAGCCCCCGTGACTGGGCTCTCGGTAGAGTGGCAGGGCGTGTGTGTTGGAATGGAAGATGGAAAGTTAAACCTTG	A	20	PASS	ClusterIDs=HG2_PB_HySA_16705:HG4_PB_assemblyticsfalcon_25692:HG2_PB_assemblyticsfalcon_26263:HG2_10X_allpass_1540:HG3_10X_allpass_1849:HG3_PB_assemblyticsfalcon_26154:HG2_PB_assemblyticsPBcR_25453:HG4_10X_allpass_1796:HG4_Ill_Krunchall_13113:HG3_Ill_Krunchall_12502:HG2_Ill_Krunchall_12836:HG2_Ill_tnscope_1055:HG4_PB_pbsv_9328:HG4_PB_SVrefine2PBcRDovetail_4602:HG4_PB_SVrefine2Falcon1Dovetail_5645:HG4_Ill_SVrefine2DISCOVARDovetail_6623:HG4_Ill_MetaSV_5257:HG4_Ill_GATKHCSBGrefine_6418:HG3_PB_pbsv_9070:HG3_PB_SVrefine2PBcRDovetail_4176:HG3_Ill_MetaSV_5199:HG3_Ill_GATKHCSBGrefine_6225:HG2_PB_pbsv_9294:HG2_PB_SVrefine2PBcRplusDovetail_10900:HG2_PB_SVrefine2PB10Xhap12_6809:HG2_PB_SVrefine2Falcon1plusDovetail_11702:HG2_Ill_SpiralSDKrefine_16789:HG2_Ill_MetaSV_5021:HG2_Ill_GATKHCSBGrefine_6306:HG2_10X_SVrefine210Xhap12_6597:HG2_Ill_breakscan11_1341;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6597:HG2_Ill_GATKHCSBGrefine_6306:HG2_Ill_MetaSV_5021:HG2_Ill_SpiralSDKrefine_16789:HG2_PB_SVrefine2Falcon1plusDovetail_11702:HG2_PB_SVrefine2PB10Xhap12_6809:HG2_PB_SVrefine2PBcRplusDovetail_10900:HG2_PB_pbsv_9294:HG3_Ill_GATKHCSBGrefine_6225:HG3_Ill_MetaSV_5199:HG3_PB_SVrefine2PBcRDovetail_4176:HG3_PB_pbsv_9070:HG4_Ill_GATKHCSBGrefine_6418:HG4_Ill_MetaSV_5257:HG4_Ill_SVrefine2DISCOVARDovetail_6623:HG4_PB_SVrefine2Falcon1Dovetail_5645:HG4_PB_SVrefine2PBcRDovetail_4602:HG4_PB_pbsv_9328;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00653924;ClusterMaxSizeDiff=0.00653924;ClusterMaxEditDist=0.00653924;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3974;DistBack=12030;DistForward=-3968;DistMin=-3968;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=8:25066679-25070659;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3921.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:115:1/1:0:21:0:6:./.:0:0:0:0:1/1:0:26:1/1:1:238:4046:.:.
chr8	25204075	HG2_Ill_svaba_11660	CTCACGCCTGTAACCCCAGCACTTTGGGAGGCCGAGGTGGATGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCTGTCTCTACTAAAAATACCAAAATTAGCTGGGCGTGGTGGCACGCGCCTATAGTCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATCCCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATTGTGCCA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_9072:HG2_PB_SVrefine2PBcRplusDovetail_10902:HG3_Ill_MetaSV_5201:HG2_Ill_MetaSV_5022:HG3_PB_SVrefine2PBcRDovetail_4178:HG3_Ill_svaba_11757:HG3_Ill_manta_2151:HG3_Ill_SVrefine2DISCOVARDovetail_6812:HG3_Ill_GATKHCSBGrefine_6227:HG3_10X_allpass_1850:HG2_PB_assemblyticsfalcon_26266:HG2_PB_SVrefine2Falcon1plusDovetail_11704:HG2_Ill_svaba_11660:HG2_Ill_manta_2637:HG2_Ill_GATKHCSBGrefine_6307:HG2_10X_SVrefine210Xhap12_6599:HG2_PB_assemblyticsPBcR_25456:HG3_PB_HySA_13938:HG3_Ill_Spiral_9763:HG2_Ill_Spiral_650:HG2_Ill_Krunchall_12837:HG2_PB_pbsv_9296;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6599:HG2_Ill_GATKHCSBGrefine_6307:HG2_Ill_manta_2637:HG2_Ill_svaba_11660:HG2_PB_SVrefine2Falcon1plusDovetail_11704:HG2_PB_assemblyticsfalcon_26266:HG3_10X_allpass_1850:HG3_Ill_GATKHCSBGrefine_6227:HG3_Ill_SVrefine2DISCOVARDovetail_6812:HG3_Ill_manta_2151:HG3_Ill_svaba_11757:HG3_PB_SVrefine2PBcRDovetail_4178;NumExactMatchSVs=12;ClusterMaxShiftDist=0.175153;ClusterMaxSizeDiff=0.175153;ClusterMaxEditDist=0.175153;PBcalls=8;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-225;DistBack=31410;DistForward=73598;DistMin=31410;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:25204076-25204300;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3922.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:67:29:./.:57:2:11:31:./.:0:0:0:0:0/1:39:9:./.:.:.:.:.:.
chr8	25327221	HG2_Ill_Krunchall_12839	GATACACTTTATGAGATAAAGTGTACACTTTTCTCAGGATAAAGTATCTCCTGTACAC	G	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_26158:HG4_PB_pbsv_9330:HG3_PB_pbsv_9074:HG4_PB_HySA_13486:HG3_PB_HySA_13941:HG2_PB_HySA_16708:HG4_PB_assemblyticsfalcon_25695:HG4_Ill_svaba_11765:HG4_Ill_scalpel_8640:HG4_Ill_manta_2259:HG4_Ill_Krunchall_13114:HG4_Ill_GATKHC_15066:HG4_Ill_GATKHCSBGrefine_6420:HG4_Ill_Cortex_3610:HG4_Ill_250bpfermikitraw_12469:HG4_Ill_150bpfermikitraw_11952:HG4_CG_vcfBeta_5941:HG3_Ill_svaba_11760:HG3_Ill_scalpel_8964:HG3_Ill_manta_2152:HG3_Ill_Krunchall_12504:HG3_Ill_GATKHC_14958:HG3_Ill_GATKHCSBGrefine_6229:HG3_Ill_Cortex_3636:HG3_Ill_250bpfermikitraw_12154:HG3_Ill_150bpfermikitraw_11806:HG3_CG_vcfBeta_5023:HG2_PB_assemblyticsfalcon_26267:HG2_Ill_svaba_11662:HG2_Ill_scalpel_8866:HG2_Ill_manta_2638:HG2_Ill_SpiralSDKrefine_16791:HG2_Ill_Krunchall_12839:HG2_Ill_GATKHC_14997:HG2_Ill_GATKHCSBGrefine_6308:HG2_Ill_Cortex_8810:HG2_Ill_250bpfermikitraw_12525:HG2_Ill_150bpfermikitraw_11777:HG2_CG_vcfBeta_5277:HG2_10X_allpass_1541:HG2_PB_assemblyticsPBcR_25457:HG2_Ill_breakscan11_1342:HG2_PB_pbsv_9297;NumClusterSVs=43;ExactMatchIDs=HG2_10X_allpass_1541:HG2_CG_vcfBeta_5277:HG2_Ill_150bpfermikitraw_11777:HG2_Ill_250bpfermikitraw_12525:HG2_Ill_Cortex_8810:HG2_Ill_GATKHCSBGrefine_6308:HG2_Ill_GATKHC_14997:HG2_Ill_Krunchall_12839:HG2_Ill_SpiralSDKrefine_16791:HG2_Ill_manta_2638:HG2_Ill_scalpel_8866:HG2_Ill_svaba_11662:HG2_PB_assemblyticsfalcon_26267:HG3_CG_vcfBeta_5023:HG3_Ill_150bpfermikitraw_11806:HG3_Ill_250bpfermikitraw_12154:HG3_Ill_Cortex_3636:HG3_Ill_GATKHCSBGrefine_6229:HG3_Ill_GATKHC_14958:HG3_Ill_Krunchall_12504:HG3_Ill_manta_2152:HG3_Ill_scalpel_8964:HG3_Ill_svaba_11760:HG4_CG_vcfBeta_5941:HG4_Ill_150bpfermikitraw_11952:HG4_Ill_250bpfermikitraw_12469:HG4_Ill_Cortex_3610:HG4_Ill_GATKHCSBGrefine_6420:HG4_Ill_GATKHC_15066:HG4_Ill_Krunchall_13114:HG4_Ill_manta_2259:HG4_Ill_scalpel_8640:HG4_Ill_svaba_11765:HG4_PB_assemblyticsfalcon_25695;NumExactMatchSVs=34;ClusterMaxShiftDist=0.126126;ClusterMaxSizeDiff=0.126126;ClusterMaxEditDist=0.142857;PBcalls=10;Illcalls=29;TenXcalls=1;CGcalls=3;PBexactcalls=2;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=3;HG2count=17;HG3count=13;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-57;DistBack=7156;DistForward=56217;DistMin=7156;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:25327220-25327279;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3923.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:16:0:33:./.:0:0:0:0:1/1:0:57:./.:.:.:.:.:.
chr8	25453819	HG2_Ill_150bpfermikitraw_11779	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTCTC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_9298:HG2_Ill_150bpfermikitraw_11779:HG3_PB_pbsv_9075;NumClusterSVs=3;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11779;NumExactMatchSVs=1;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.177083;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-103;DistBack=2493;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:25453820-25453922;PctSeqSimilarity=0.9174;PctSizeSimilarity=0.9126;PctRecOverlap=0.9135;SizeDiff=9;StartDistance=-7;EndDistance=2;GTMatch=0;TruScore=91;MatchId=3924.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:0|1:30:1:6:40:./.:0:0:0:0:0/1:23:25:./.:.:.:.:.:.
chr8	26079319	HG4_PB_SVrefine2Falcon1Dovetail_5654	AATGTAGAATATATTCTATATTATATATTATATATATAATATATTCTATATAATATAGAATATAGAATATATTCTATATTATATATAATATATTATATATAATATATAATATATTCTATATAATATATAATATATTCTATATAATATATATAATATTTTATATATATAAATAATATATAATATATTATAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6603:HG4_PB_assemblyticsfalcon_25708:HG4_PB_SVrefine2Falcon1Dovetail_5654:HG2_10X_allpass_1542:HG4_Ill_manta_2261:HG2_Ill_manta_2640:HG2_PB_pbsv_9305:HG2_PB_HySA_16722:HG4_PB_pbsv_9338:HG4_PB_HySA_13499:HG4_PB_SVrefine2PBcRDovetail_4613;NumClusterSVs=11;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_5654:HG4_PB_assemblyticsfalcon_25708;NumExactMatchSVs=2;ClusterMaxShiftDist=0.37037;ClusterMaxSizeDiff=0.37037;ClusterMaxEditDist=0.37037;PBcalls=7;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-189;DistBack=-82;DistForward=-91;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=58;REFWIDENED=8:26079264-26079510;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0.9579;SizeDiff=0;StartDistance=8;EndDistance=8;GTMatch=0;TruScore=98;MatchId=3925.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:14:0|1:28:0:1:11:./.:0:0:0:0:0/1:40:6:./.:.:.:.:.:.
chr8	29818284	HG4_10X_allpass_1797	ACCAGCCTGGGCATCATGGGGAAACTCCATCTCTAAAAAAAAAAAAAAAAAATTAGCCCAACATGGTGGCTCATGCCTGTCATCCCAGGTACTCAGGAGGCTGAGGTGAGAGAATCAGTTGAGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6613:HG2_PB_assemblyticsPBcR_25492:HG2_PB_assemblyticsfalcon_26299:HG2_PB_HySA_16762:HG4_PB_HySA_13539:HG4_PB_pbsv_9353:HG4_Ill_svaba_11801:HG4_Ill_scalpel_8668:HG4_Ill_SVrefine2DISCOVARDovetail_6641:HG4_Ill_MetaSV_5265:HG4_Ill_GATKHCSBGrefine_6449:HG4_10X_allpass_1797:HG2_PB_pbsv_9324:HG2_PB_SVrefine2PBcRplusDovetail_10919:HG2_PB_SVrefine2PB10Xhap12_6826:HG2_PB_SVrefine2Falcon1plusDovetail_11720:HG2_Ill_svaba_11704:HG2_Ill_scalpel_8892:HG2_Ill_manta_2647:HG2_Ill_SpiralSDKrefine_16819:HG2_Ill_MetaSV_5028:HG2_Ill_GATKHCSBGrefine_6332:HG2_10X_allpass_1543;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6613:HG4_PB_pbsv_9353:HG4_Ill_svaba_11801:HG4_Ill_scalpel_8668:HG4_Ill_SVrefine2DISCOVARDovetail_6641:HG4_Ill_MetaSV_5265:HG4_Ill_GATKHCSBGrefine_6449:HG4_10X_allpass_1797:HG2_PB_pbsv_9324:HG2_PB_SVrefine2PBcRplusDovetail_10919:HG2_PB_SVrefine2PB10Xhap12_6826:HG2_PB_SVrefine2Falcon1plusDovetail_11720:HG2_Ill_svaba_11704:HG2_Ill_scalpel_8892:HG2_Ill_manta_2647:HG2_Ill_SpiralSDKrefine_16819:HG2_Ill_MetaSV_5028:HG2_Ill_GATKHCSBGrefine_6332:HG2_10X_allpass_1543;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0571429;PBcalls=9;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-123;DistBack=52086;DistForward=19118;DistMin=19118;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=8:29818285-29818411;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3926.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:42:0:1:25:./.:0:0:0:0:0/1:34:14:./.:.:.:.:.:.
chr8	29837538	HG2_PB_SVrefine2Falcon1plusDovetail_11721	ATAGCATAGAACAAAGCAAAGTCTCCACCCCCTTGGAATTTCCATCTCATTGGGGAAGACAGACCACTGACATCCATACATACACACATGCAGCACTGTAATACCGGTAATTGATACTATGAAGTTAGGGCAATGCAATTGTGACTTAGGAGGTAAAGTTACTACATTTATCTGGGGAGAATGAGAAAGACTTCTCTGAGAGGTCACATCTGAGCTGATATCTAAGTACTAAGAAGAATATCGGACAGGGCATTCCAGGCAGCTGGGACAACAGGTGCAGAGGTCCTGCGAGCAGAGCCAGCCTGGGATATGTGAGGGATTGAAAGAAAGCCCAGGGTGGCTCGCCTGTGGTGGGTCAGGAAGAGCAACGAATTTCCAAGGTGGGGAAATCATACAGAGTTTGGAGTCTGCTTCCCTTTACCCTGACCTGTCTCTCCTTCCACTCCAGTTCTGCACACTTCCAAGCCTTGTCCCACATTCTGGGGATGGCTTAACTCTTAATTTGACTTTCAAGCTGGTGTTCATGACTTTGGTCTTTGACTTTCTCCTAATAATTTCAGCTATGCTCTCTGTGTCAAGCCATTCTTGCATTGCTTTAAAGAAATACTGAGGCTGGGTAATTTATAATGAAAAGAGGTTTCATTGGCTAATGGTTCTGCAGGCTGTACAAGAAGCATAGCACCAGCATCTGCTCAACTGCTGGGGAACCTCAGGGAGTTTTTAGTTATGGCAGGAGTAGGCACATCAC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_9354:HG4_Ill_Krunchall_13148:HG2_Ill_Krunchall_12879:HG3_PB_assemblyticsfalcon_26197:HG2_PB_assemblyticsfalcon_26300:HG4_PB_SVrefine2PBcRDovetail_4621:HG4_Ill_manta_2267:HG4_Ill_MetaSV_5266:HG4_Ill_GATKHCSBGrefine_6450:HG4_10X_allpass_1798:HG3_PB_SVrefine2Falcon1Dovetail_5663:HG2_PB_pbsv_9325:HG2_PB_SVrefine2PB10Xhap12_6828:HG2_PB_SVrefine2Falcon1plusDovetail_11721:HG2_Ill_manta_2648:HG2_Ill_SpiralSDKrefine_16820:HG2_Ill_SVrefine2DISCOVARplusDovetail_12766:HG2_Ill_MetaSV_5029:HG2_10X_allpass_1544:HG2_10X_SVrefine210Xhap12_6614:HG2_Ill_tnscope_1056;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6614:HG2_10X_allpass_1544:HG2_Ill_MetaSV_5029:HG2_Ill_SVrefine2DISCOVARplusDovetail_12766:HG2_Ill_SpiralSDKrefine_16820:HG2_Ill_manta_2648:HG2_PB_SVrefine2Falcon1plusDovetail_11721:HG2_PB_SVrefine2PB10Xhap12_6828:HG2_PB_pbsv_9325:HG3_PB_SVrefine2Falcon1Dovetail_5663:HG4_10X_allpass_1798:HG4_Ill_GATKHCSBGrefine_6450:HG4_Ill_MetaSV_5266:HG4_Ill_manta_2267:HG4_PB_SVrefine2PBcRDovetail_4621;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0026738;ClusterMaxSizeDiff=0.0026738;ClusterMaxEditDist=0.00401338;PBcalls=8;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-747;DistBack=-768;DistForward=-747;DistMin=-768;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:29837539-29838285;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3927.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:32:0|1:31:5:1:27:./.:0:0:0:0:0/1:59:14:0/1:78:13:.:.:.
chr8	30392277	HG3_Ill_svaba_11811	TAAAACTGATAACTACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_653:HG4_PB_assemblyticsfalcon_25745:HG2_PB_assemblyticsfalcon_26311:HG2_PB_assemblyticsPBcR_25502:HG3_PB_HySA_13997:HG2_PB_HySA_16773:HG4_Ill_Krunchall_13156:HG3_Ill_Krunchall_12556:HG2_Ill_Krunchall_12890:HG3_PB_assemblyticsfalcon_26208:HG2_PB_pbsv_9333:HG4_PB_pbsv_9362:HG4_PB_HySA_13549:HG4_Ill_MetaSV_5268:HG3_Ill_MetaSV_5209:HG2_Ill_tnscope_1057:HG2_Ill_MetaSV_5030:HG4_PB_SVrefine2PBcRDovetail_4623:HG4_PB_SVrefine2Falcon1Dovetail_5663:HG4_Ill_svaba_11809:HG4_Ill_scalpel_8677:HG4_Ill_manta_2270:HG4_Ill_SVrefine2DISCOVARDovetail_6644:HG4_Ill_GATKHCSBGrefine_6453:HG4_10X_allpass_1799:HG3_PB_pbsv_9101:HG3_PB_SVrefine2PBcRDovetail_4195:HG3_Ill_svaba_11811:HG3_Ill_scalpel_9003:HG3_Ill_manta_2160:HG3_Ill_SVrefine2DISCOVARDovetail_6839:HG3_Ill_GATKHCSBGrefine_6251:HG3_10X_allpass_1853:HG2_PB_SVrefine2PBcRplusDovetail_10924:HG2_PB_SVrefine2PB10Xhap12_6831:HG2_PB_SVrefine2Falcon1plusDovetail_11724:HG2_Ill_svaba_11712:HG2_Ill_scalpel_8903:HG2_Ill_manta_2650:HG2_Ill_breakscan11_1345:HG2_Ill_SVrefine2DISCOVARplusDovetail_12770:HG2_Ill_GATKHCSBGrefine_6335:HG2_10X_allpass_1546:HG2_10X_SVrefine210Xhap12_6619:HG3_Ill_Spiral_9814;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6619:HG2_10X_allpass_1546:HG2_Ill_GATKHCSBGrefine_6335:HG2_Ill_SVrefine2DISCOVARplusDovetail_12770:HG2_Ill_breakscan11_1345:HG2_Ill_manta_2650:HG2_Ill_scalpel_8903:HG2_Ill_svaba_11712:HG2_PB_SVrefine2Falcon1plusDovetail_11724:HG2_PB_SVrefine2PB10Xhap12_6831:HG2_PB_SVrefine2PBcRplusDovetail_10924:HG3_10X_allpass_1853:HG3_Ill_GATKHCSBGrefine_6251:HG3_Ill_SVrefine2DISCOVARDovetail_6839:HG3_Ill_manta_2160:HG3_Ill_scalpel_9003:HG3_Ill_svaba_11811:HG3_PB_SVrefine2PBcRDovetail_4195:HG3_PB_pbsv_9101:HG4_10X_allpass_1799:HG4_Ill_GATKHCSBGrefine_6453:HG4_Ill_SVrefine2DISCOVARDovetail_6644:HG4_Ill_manta_2270:HG4_Ill_scalpel_8677:HG4_Ill_svaba_11809:HG4_PB_SVrefine2Falcon1Dovetail_5663:HG4_PB_SVrefine2PBcRDovetail_4623;NumExactMatchSVs=27;ClusterMaxShiftDist=0.090604;ClusterMaxSizeDiff=0.090604;ClusterMaxEditDist=0.090604;PBcalls=16;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-304;DistBack=15277;DistForward=-291;DistMin=-291;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:30392278-30392595;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3928.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:81:1/1:0:56:1:39:./.:0:0:0:0:1/1:0:49:./.:2:17:.:.:.
chr8	31571241	HG2_Ill_SVrefine2DISCOVARplusDovetail_12774	ATTCTCTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6623:HG2_10X_allpass_1547:HG3_PB_assemblyticsfalcon_26213:HG4_PB_assemblyticsfalcon_25754:HG2_PB_assemblyticsfalcon_26319:HG2_PB_assemblyticsPBcR_25511:HG4_Ill_Krunchall_13162:HG4_PB_HySA_13559:HG4_PB_pbsv_9365:HG2_PB_HySA_16781:HG2_Ill_tnscope_1058:HG4_PB_SVrefine2PBcRDovetail_4626:HG4_PB_SVrefine2Falcon1Dovetail_5666:HG4_Ill_manta_2271:HG4_Ill_SVrefine2DISCOVARDovetail_6648:HG4_Ill_MetaSV_5269:HG4_Ill_GATKHCSBGrefine_6454:HG4_10X_allpass_1801:HG3_PB_pbsv_9104:HG3_PB_SVrefine2PBcRDovetail_4198:HG3_PB_HySA_14004:HG3_Ill_manta_2162:HG3_Ill_SVrefine2DISCOVARDovetail_6844:HG3_Ill_MetaSV_5210:HG3_Ill_GATKHCSBGrefine_6252:HG3_10X_allpass_1854:HG2_PB_pbsv_9337:HG2_PB_SVrefine2PBcRplusDovetail_10927:HG2_PB_SVrefine2PB10Xhap12_6834:HG2_PB_SVrefine2Falcon1plusDovetail_11728:HG2_Ill_manta_2652:HG2_Ill_breakscan11_1347:HG2_Ill_SpiralSDKrefine_16830:HG2_Ill_SVrefine2DISCOVARplusDovetail_12774:HG2_Ill_GATKHCSBGrefine_6337;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6623:HG4_PB_SVrefine2PBcRDovetail_4626:HG4_PB_SVrefine2Falcon1Dovetail_5666:HG4_Ill_manta_2271:HG4_Ill_SVrefine2DISCOVARDovetail_6648:HG4_Ill_MetaSV_5269:HG4_Ill_GATKHCSBGrefine_6454:HG4_10X_allpass_1801:HG3_PB_pbsv_9104:HG3_PB_SVrefine2PBcRDovetail_4198:HG3_PB_HySA_14004:HG3_Ill_manta_2162:HG3_Ill_SVrefine2DISCOVARDovetail_6844:HG3_Ill_MetaSV_5210:HG3_Ill_GATKHCSBGrefine_6252:HG3_10X_allpass_1854:HG2_PB_pbsv_9337:HG2_PB_SVrefine2PBcRplusDovetail_10927:HG2_PB_SVrefine2PB10Xhap12_6834:HG2_PB_SVrefine2Falcon1plusDovetail_11728:HG2_Ill_manta_2652:HG2_Ill_breakscan11_1347:HG2_Ill_SpiralSDKrefine_16830:HG2_Ill_SVrefine2DISCOVARplusDovetail_12774:HG2_Ill_GATKHCSBGrefine_6337;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0776978;ClusterMaxSizeDiff=0.0776978;ClusterMaxEditDist=0.0776978;PBcalls=16;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-353;DistBack=-487;DistForward=14751;DistMin=-487;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:31571242-31571608;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3929.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:0:31:0:20:./.:0:0:0:0:1/1:0:47:0/1:5:10:.:.:.
chr8	32680005	HG4_PB_pbsv_9369	ACAGGAGCCACTTCTCTGACTTTGGCCATAGGATGAGAAGGCATTTGAAGAAGACCTAAGCCAGCAGAACAGTCATAGCCAACCTGCAGAGCTGTGAGTAAGAACTGTTTGTTGTTTAAATCAACTGAAATTTAGGAGATCTTTTTCCATGCAGCCCTATCACAGCAAAAGCTGTCTTGGATATTCTTTTAATGGTGGGGCAGGGGAGTGGCTAATATTCACAGATCATTGGCATTTGAGCTAATCATGTTTCTGTCCAGACAACTATGTGTGGAAAATATCAAACTCAAAGAGGGATTATTCTTGAAATTATCAAGTCAGTTAGGAACCAAGATGCTTGTTCTAAAAATATCCTGCTATTCAGCATGCAAAATGTAACATTAAAAATAAAAACAAAAAGGAATTGCATCTAACTTCACTGAAGATTATTGACAGACTGGCTGCATTTCTTCTACAGCTTGAGTACACGGTGATGGCACCATTTCAAGTCCTCAGCTCATTGGTCTCATTTTCAGGGCAGTCAGTATTTTTTTAAAAATTTGTTTCCATTGTTGCATTTGTTTGCTCAACAGCTACAATATTTGGATAAACATATTTTTAATTGCACTTAGAACTTTTTATGTACAAATTTTGTAGGCATTGGACTTCCGCTTTTAAAACAGCCTCAGAACACTTTATTTTTCTTCTGATTTGTCTGTATCTTTCTCTATCTGTTTTTTCTCCAGTGGTGCTTTTCTTTATCCCTTGGGGGCTGCTCATCAGATTTCTTTTTTTTTCTTTTTACATTAAGAAAAATGAGATGGGGTCTTTCTCTGTCATCCAGACGGTAGTGCAGTGGTGCAATCATAGCTCATTGCAGCCTCAAGCTCCTGGGCTCAAGAGATTCTCCCATCTCAGCCTCCTGAGTAGCTGGGACCACAGGTGTGAGCCACCATATCTAGCTAAATTTTTACATTTTTTTAAGAGATGGTGTCTCCTTATTTGCCCAGGCTGGTCTTGAACTCCTGACTTCAAACGATTCTCCTGTCTCAGCTTCCCAAAGTGCTGGGATTACAGGCATAAGCCACCACTCCTGGCTAGCTTGTTAGAATTCTGATTGAGGTCCACTGGTATATTTTTTTCTTCTATCCATCCCTATGCAGTGGAATACGTCTACTTGTTAAATTTCTGTCTATGTAAATTTTCTATACAGGGTTGGCCAACCTCACTTACCAGGTAGAGGTAATTGGCACTTCCAGCATATTTCTGAAAGTGGACTTAGAGAACTAATAATAACTGATGGCCTTGTAAATGTAACGCCTTCATGATAAGCACCAGGCTATTTTGTGAAACAATGACCACCAGCTTCTTTTCTGGGATATTTATCTCTAGGCTTAACCTTAATCCTTCACTCTAATCATCTTAATACATAAAATCTATCTAATTATGTGTTTTATTCATACTATTCTTTACAAATTACACACACAGTGTTTGCTTTAAATTTCACATCGTCTTTGCTACTATTATTCAAGTATATGATCAATGCCTAGAAAAGTTTAAAAGAAGCCAAATCGAAAGAATGCATGAGGTCTAAATAATTATTATAAATTCAATAAATATAAATATTTAAATGAAAATGTATGACTGTTTTGGGGACAGTATGCAGAATATACAAATTTCAATAATAACAGCAACCTAGGTTTAATCTCTCATCAAACAGGAAAAATATTGAAAAGGATTCTAGGCAGAAAGAAAAAGAGGCAAGTGTAGTTCCTTATTTCATACTAGGAAGAAATGAAATATTATTTGATTTTTCTCTTAAATTTTGCAATCACAACATAGGCTCAAGTATGTATGATGGGAGGGTGCACTGAATCCACCCACCCCAGTTTACCTCCAGACACAAAACCCATACTTAATAAGCAAGAAATAAAAGCTAACGAACTGCGAAAATTGTTTCTTTTATGCTTGCAGAAACCTGCGGACTTGAGCTTACCATGGGCAGGTTGTGAAAGAGGAAGTGAATGGTGAATATGTGCAACCTGAAGAGTTCAGGAAAGAAATTAGGGAAAATAGCTGATCCCCGTGACTAAAGGGATTTCAAAGAGAGAAGTCCTGTGGAAAGAGAGTTGTTCAAGCAGAATTTGTTAAAATGTTGGTTGTTACCGTTGCAATATAATACTTTTTTTCATCTCCCCATAAAATATTAAATGAAATTTATATTCCGTGTCAAAGTACTTCTGAATCTAAAGCTGTACTTTTGAGGAGATATTCAAGTGGGCAAAAGTGGCACAACAAAAGTAGGCCCCCAAAGATGTATGGTACTTTTAAACTTAATTGTAAAATTAACCGCAAAATATTAGAAAAAAATTAAAGCAAATAATATGTAACCTGTAGGAGACAGAAAAGAAAACAAACCTTAAGGAAGCATAAGAAAAAGATGATGGCATATAAATAAGTCTAAGTGTATCACATAAGTTAACAAGCAATAAACAGGTTAAAAAATCTAATGCTGGATGCTCATGCCTGTAATCCCAACACTTTTGGAGGCAGAGGTGGGAGGATTGCTTGAGGCCAGGAGTTCCCAAACAGCCAGGGCAACAAGCAAGACTCCATTTCTCCAGAAAAAAACAAACAAAAAAAAGCCAGGCATGTTGGTGTCTGCCAGTAGTCCAAGCTACTCAGGAGACTGAAGTGGCAGGATTGTTAGAGCCCAGGAGTTCAAGGCTATAGTGAGCTCTGATTGCACCACTGCACTCCAGCCTGAGTGACAGAGCGAGACCCTGTCTCAAAAAACAAAACAAAACTGTACTAAGATCCTTAAGTGATTTTTGAAAACAAAACCTAAACAGTGATACAAAAAATGTAAACAAAAATGATACATAAACAAAAGTTAAACAGAAATACATTGGAGTTAGCAATAATAGAATCAAAAACACAGAAGAGTAAAATGGAGAGAGTGGGCCATTTGGTAAGGCTGTTATGCACAGTCTATAATTATATGATAAGTAGCTAGCTTGTAATCAAAATATGTAAATAAAAACATTAGAAATGAATGGAGCATAATGATAACAATACTACTAATAATAAAACTAAAGCTATAGATCATATTATGTGCCAGGCACGATGCCAATTGCTATAGCTCCATTACCTCTTAGGCTAAGTTGGGAGTCATTATCTTTGTTTCATAAATGAGACACTAAAGTTTAGAGACATGCACTAACTTGACCAAGATGACACAGCTGGTTAAGTACAAAACCAAGTTTTAAAACAGGCAGCCTGACTCTTCATCCACATGATTAACCTTGACAAAATGTAGCAGGGGTATTTTAAAAGGAGAATTTAGCCTAACCCAAAACTTTAATGTTTTAGGTAAATAAAAATAAATACTATGACAGAGGACTGTTATTACAATTTTTTAATACAGTTATTTTCTGCATACAAAGAAAAAAAACCCTCACCTTTTCAAGAATCCATGAGGCATTTACAGAATGGGTTCAATACTGAGCCCAAAATTAAATATTAAGAAACAAATATTTAACAAGCCATATTTACTCATAATAGAATTTTAAAAATTAAAAGTTGTTCAATTATATAAAGAAGTCAGCAAGTCTTCCTAAACTCAATCTATTATAAAAAATATAACACACAAACCCTAAATAAGAGGTAAAATCTTAAGTAGAATTATAATTATATATAATTCAATGACAAAGCAATACATTCAACATTGATGTGCAGTGAAATAAGTACTTTCAGTAAAATTCACATGTATTAGTCTGTTTTCATGCTGCTAATAAAGACATACCCGAGACTGGGAAGAAAAAGAGGTTTAATTGGACTTACAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCGGGAGGCAAAAGGCACTTCTTACATGGCAAGAGAAAATGAGGAAGCAGCAAAAGCAGAAACCCCTGATAAACCCATCAGATTTCATGAGACTTAGTGACGATCATGAGAATAGTATGGGAAAGACCAGCCCCCATGATTCAGTTACCTCCCCCTGAGTCTTTCCCACAACATATGGGAATTCTGGGAGATACAATTCAAGTTGAGATTTGGGTGGGGACACAGCCAAACCATATCAACATGTTAAGACTTTCCTTATTTAATAAGAAAAAAAAAACCACAAAAAATAATCACAGCATTGAGCTATTTCTTCTAAGAGAGAAATGAAAGAAACTTAAAGACCAAGGAAATACAGAAAGAAAAAAGAGAATTAATAAATTAGAGAACAGGAATACAAGATGATGAATAATATAAATTGATTATTTAAAATTATGAAAATATGCACAACTTTTTGAAGAGTAAGTAAAATGAGAAAAGCCAAATTAAGAATGATAATGGGGATAGAATAATACTCTATTTAAACATTTCTGAAAACATATAATCAAAATTGTTACAAAATAAATAGAAATACATATGTTTGATTCTCAGACTCCCAGTCTGTAAAGTTTTTGCTTTTATTTTTTTAGAGACAGGGTCTCACTATGTAGCACAGTGTGGTTTTGCAAACTATCAGGAAACAGATAACTTTTGTGTTATGTAACCGAGAATTAATATCAAAAAGTTGAAAAAATCCCCAATAATATAAATCCTAACAATAAGTGCAAAAAAGCAACAAACAATCCAGTGTTTAAGAACATATATATATATTCTGTAAACGTTTATCTGTATTCTTTTGTGTGTGTGTGTGTGTGTGTTTACTGTTTGTCAGATATTACTAGAAAGTTTTTCAACTTGATATTCTCATTTAGCTTAGTAACATGAAAGTTACCTTTGTGTACATATATACGTACAGGCTAAAACTCTAAAATACATTAGCAATTTAAAGCGTGACCAAGACGGATGTATCCTTGGTGCTCTGGAATGTCCTTCCTCACTCTGGCAGTAGTTTAGGAGACTCCAGCTCAGCAAGTGTGAGTTGGAGAACACAGGACCCCTGGCCAACACAAGGCTGAGCTCCAAAGGCTCCCATTTCCTGATGAAATCCTTTCCTTCCCCTTCTGTGTCCATTTGTGGCATAGCCCATTGGGTATTCCCAGTCCCTCTTGAACTCGTTTATAAATATGTAAAGCAGCAGTCAGTTGAGACCCTCTCTTGGAGCCTTTCCTATGATGTCTCCTGCCCACGTGCACCTCTCAGCAGGAGGAGTCAGGGTGTTTTGCTGCTTCTCTGCTTCTAAGTGTCCATTCCTCCCCAGCACTGTCAGTCCACACTCCACTGCATAACAGAAAAATTAGTAAATTGTCCGCAACACTCAAGAGTTTATCATACGAATGCTAAGATACTTTATTTTTAGAAAATACTTTTGAGACAGAGTTTCATTCTATTACCCAGGCTGGAATGCAGTGGCATGATCTTGGCTCACTGCAACCTCCACCTCCTGTGCTCAGGTTATCCTCCTACCTCAGCCTCTCAAGCTGCTGGGACTACAGGCATGTGCCACCCTGCCCAGCTAATTTTTTGTAAAGAAAAAATATATATATTTTTAAGAGACAAGGTCTCATTATGTCCTCCAGGATGAGTGCAATGGCACAATCATACCTCACTGAAGCCTCGAAATCCTAGGCTCAGGCGGTCCTCCCACCATAGCCTCCCAAAGTACTGAGATCACAGGCATGAGCTACCCTGCCTGGCCAGAAAAATACATTTTAAGAAGCTAATTTTTTTTTAATTATTACACTTTAAGTTTTAGGGTACATGTGCACAATGTGCAGGTTAGTTACATAGGTATACATGTGCCATGCTGGTGTGCTGTACCTATTAACTCATCATTTAGCATTAGGTATATCTCCTAATGCTAACCCTCCCCCCTCTCCCCACCCCACAACAGTCCCCAGAGTGTGCTGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTAAGAAGCTAATTTAACCCATTTATGCCTGAGGTTGCAATTTTTTGAATTTGAAAAATCAGACCTTGGTGATGACCTTGAGCAGTAGGATATAAATAACTCCCACATGCTTACTGTTCTAATAATGGAACGCTAGGCATAGGTGGGTTTAAGCTGAAAGAATAATCTCAAGACATGCCAAAATGATATTTGATAAATTTCAAAGCCTACTGACAAAGATATATCAGGATCCAGGGATTTTCTCCATATAACAAATCATTTATAAATCACAGTGAAGTCAACATCCTCATAATGAAACATGAAACTCTCCTATTTAAAATTAGTGATAAGGCAGGGATGCTTACTGCTGTTTGCGTTATTTGCACTTCTACAGGAAACATTAACCTATATGAAGCAGAAAAAAAATTATGACTATTTGCCAATAATGTTATTTTGTAAAAAATTATACATTTCAAATTCTTTAATTCAGCCTTTACTAGAATTAAAGTAAAAATTAGAAATCACACAATTTTTAACAGCCAAATCTTTGAGAGATTTATGCACTCTGACCTACCAACCCCAATATTTAGGAATACAAAGAATTGAATTGGCTATTACATTTTGTAATATGGGTAAGAAAAAACAGTGGCGAGGCATGGTAGCTCACACCTATAATCCCAGCACTTTGGAAGACTAAGGCAGGGGGAGTGCTTGTGGCCAGAAGTTTGAGACCAGCTGCCCACTACAGAAAGACCCTGTCTCTACAAAAAAATAACCAGGTATGGTGGCGTGTGCCTATAGTCCCAGCTGTTGGGAGGCTGAGGCAAAAGGATCATTTGAGTTCAGGAGGTTGAGTCTGCAGTGAGTTGTGATTGCGTCACTGCATTATAGCCTGGGCAACAAAGCAAGACCCTGTCTCTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATGAGAAAAAGAGCTGGAAATGATTCAGACACAGCTACCCTGAAGCTTGGGGTAAAGTTCCTTTCTGGCCTATTTTTATTTATTCTATATCTTTTTAGAAATACATGTTTTCTAATTTTTAAAGTTGATACATAAGAATTTTTCATGACACCTGTAATTCCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACTTGAGGTCAGGAGTTAGAGACCAGCCTGGTCAACATGGTGAAACCCCATCTCAACAAAAAATATACAAAAATTAGCCAGGCATGGTGGCACGTGCCTATAATCCCAGCTACTCTGGAAGCTGAGGCAGGAGAATGGCTTGAACCTGGGAGGCAGAGGCTGCAGTGAGTGGAGATCGTACCACTGCAACCCAGCCTGGGGGACAGAGGGAGACTCAGTCTAAAAAAAAAAAAAGAATTGTGCATGTTTATGGAGTACATCATTACGTTTCAATCCGTAAAGTATATAGTGAGCAAATTGGGGTAATTTGCATATCCAACACCTCAAATATTTATCATTTCCTTGTGTTGTGAATATTTAATATCTTTTCTTCTAGCTATTTGAAAATATATAATAAATTATTGTCATCAGAATATTGAAGCATGACTAGTTTGTTTGCAAGAAGCTTTCCTGCGAGAGTCTACTTGTAATTTAAGTGATGACTATCACAGAACTATTGACTTTGAAACTATAAGGCTCTTTCAATTATTTGCTACAAGAAAATGTTTTCTTTTTATTATGTATGTGTCATACGAAGGTAAAATTTCAATACTTAACACATACTTCAGCTATAATAATCTTGTTATGTTGAAGTCATGAATTATAGAACAAGAAAACTAAATGGTGATTGTAGCAGTAACATTTAAAAAATACAAAGCAGAATCTCAAAAATTTGTGTAAAATTCTTAGCACTGATAAGAATTCTGAAAGTCTTGAGGTGGTAGTGAGCTAAGATCAAAATTAAATAAAATTAAAATTTAAGAGAGTTCTGAAAGTCACGTACAAGAAACTAAATGCATTTATAAAGTATTTCTAATTAGCTGGGCATGGTGGCGCATGCCTGTAATCCCAGTTAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCCCGAGGAGGAGGTTGCAGTGAGCCTGGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCTGTCTCAAAAACAAAAACAGAAAAAACCCCAAATAAATAAAAAGCATTTCTATATACTGGACGTTATGGAGTTCGTGTTTGTGTTTTCCTCTAATTCTTGTGTTGAAACCCTGACCCCTAATAGGATGGTACTAGGAGGTGGAACCTTTGGGAAGTGAGCAGGTCATGCGGTTGGAGCCTCCCTGAATGAGATCAGTGCCCTTATGAGAAGAGACAATAGATCTCTTGCTTCCTCCATTTCTGCAATCTGCTATGTGAAGACACAGAAGAAGATGCCCAACTGCAAACCAGGAAGTAGGTCCTCATAGATACTGCACCTGCTTTGATCTCGGACTTCCAGATCTAAGAGAAGCTTTCCAGAACTAAGAGAAATAAACTTCTGCTCCTTAAACCACTCAGTCTATGGTAATTTGGCATAGCAGCCTGAACTAAGATACCAGATATATACAGAAAAAATTATTTTTAAATTTCCATTCTTGTAATAGTTGCCATAAATACCTAATACCTAGAATTAACCTTAAAAGGATATATTCAGGACCCCACAGACAAAAATCAAAACATTTTTAAAATGTTATTGATGAAAATAAAAGAATTGAGTAAATGGAGAGGCAAACATGTTCTTAACTGGTAAGTTTAAATAATTGAAAATTTTCCCCAGGCTAATTTTTAGATGGACATCCCAAAGTTTGTTTGTTTCTCTGAAGTTTGACAAAATATTATATATTATTTTTATTTTGGTCACATAATAAAATGGCATAAATACCCAAGGACATTTTTGAGACAAGGTCTCACTGGAGTGCAGATCATGGCTCACTTCAGCCTTGACCTCCTAGTATCAAGCCATCCTCCACTTCATCCTTCTGAGAAGCTGGGACTACAGATGTGAGCCACCATGCCCAACCAAGGAAGTTCCAAAAAAGAGAAGTAAGGCAAGATGTGAACCACATTATAAAACTAAAATAATTAAAATGACATCATACTAGAACCAAAATCATCATACAGGTCAGTGGAATAGAATAAAAGGTACCAAAACAGTATCTATATATACACATTTATTATCTGGGTAAAGAAGTCACTTCAAATTACTGAGTGTTAAAAAAAAATGCCACTGGGACAATTGATTAACCAAAAAGAAGAAATTAAAAACTTCATTATGTTAAGAAAAATTTTCAGTTAGGTTAAAATGTTAAAGTAAAAATAAAAATGTAGAATCTATAAAAGCAAAGCAAATTACTTAAGTTATTTTAGAGCAGGAATTTTCTGAGCATAGGGCAATGGATGAAATTCGAACACATGAAAGTAAAAAAACATGTCAAGTGAAAAGTAAAATGTAAAAAATATATGTGACAAATATGACAGTTAACATACAATGAGGTTGTTCAGCTAAAAGAACACCTCAAATATGTAGAAAGGAGGTTTCACATATCTCAAGTTGCTAATAAAAATAATAAAAATATTCAACTTGAATATAAAGCAAAAAATACAAATTATATACCATAAAATACAAATTAAGAACAGAAGTTATATACTATCTTTTCCTTACCAATTTATAGAGAGTTGGCAATGCCGTATATTCTATGATGCCTTTAAAAGGCACTCATATACTGCTGCTGTCAGAAAAATTGGTATAGACCTTCAGAAAACACATAACGAAACCTGTGAAGACATTAAAATAGGTTTATATCATTTGATTTGGTGATTTTGGTTTGAAGAATTGAAAATAAGTATATAGTCAAATAAAGATTGATATATAAAGTTCATTACAGCATTGTTTATAATAGTTTGAGTAAATAAACGGCAATAGTAAAATGGATAAATCATCGTGTCTCTAGATGGTTGATTGTAACAAAACCATTAACATTTGACATAGTTCCACAATCATAAAGTCATATGCAAAAGTCAAGATGTATAATTGTGTATAGATCTTAATTTCATGTATATTATAATTATTGAAATGTTTATAATGTTTTTTACTGGGAAGCAGAATTATAATTTTCTATAATTTCCGAATCTTCTAATGAATTATTTCAAGCAAATGGGCAAATATTTTCCTCCTTACTTAGATGTGCAAAAATCAAACAAAACAAATTTGTATTGCATTCATTCATTCATTCATTTCTTTATCTGTTTGCTTATTTATTTATTATTCCTTTTTCCTTACAAGTGCCTCTTCCCAGCTGGGTAGTGGAGGAACTTAACTTGGTCAATTGACAATCTCTCCATGTCTTCTTTAAACCATTTCCTTTCAGTTCCTGCTGGTCACCTACAGGTTAATGTTCAAGTTTTCAGAATGGAGCTTTTCATCTTTCTCCTTCCCAAGATGGAGTCTGGGTGTGAGGGAGGACATTGTGTCCTGAGGAAGATGGGGAAGGGCCCTCTCATCTTCATCTACTGTGGTGCTGTAGAGTCTTTCTCAGTCTCTGAGTGATGATTAGTGGAGTCTCTCAGCCAAAGATAGTCAGTTTCTGGAGGATGACGTCCGCCATTTGAACATCTCAGCTAACCCTGCTGCCGTCTCTTATCATTTGCATCTGGTAAATTCCTCATCTGTTATCTCTCAGTTGGTTGGAGTCCCATATCTGCTATCTACTCTTAGAAGTCTTAAGTGTTGGCAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAGCATGGTGAAACGCTGTCTCTACTAAAAATACAAAAATTAGCTGAGCATGGTGGCATGTGCCTGTAGTCCTAGCTACTCAGGAGGGTGAGGCAGGAGAATTGCTTGAACCCTGGAGGCAGAGGTTGCAGTGAGCTGAGATCATGCCACTACCCTCCAGCCTGGGCAACAGAGCAAGACTCCACCTCAAAAAAAAAGTGTTATATTTAACTTTGAAGTCTACTTAGATTTGCTGTTTGGTGTACTTTGTAAGCTACATTGTATGTCCTTTGTCTTGTCTTCAGAGATGCCCTCTCACTCTTAAAACAACTAGTATCATCAGCTACATTCTGTATCCCTTTACAGGGTGAATGGGGTTTTCCAGATGATTCCCAGGCTATGTGAGAGCAAGCAAGGTTCTGAGGAGGGCAACTTAGTTATTCTCCTGGCCTAACTTGTCATAGCCCTTATTTTACTTTTTGCCAAGTTAGTGTGGGGTTCACCTGGAGAGGTGATCTAATCCCATAGTCTCAAATGAACAAGAGAGCAGTTTAATTTCATTTATTTATTTATTTGGAGACAGTTTCTTACTCTGTCATC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6625:HG3_10X_allpass_1855:HG2_10X_allpass_1548:HG4_10X_allpass_1803:HG4_Ill_Krunchall_13173:HG3_Ill_Krunchall_12574:HG2_Ill_Krunchall_12911:HG2_Ill_tnscope_1059:HG4_PB_pbsv_9369:HG4_PB_SVrefine2PBcRDovetail_4628:HG4_PB_SVrefine2Falcon1Dovetail_5669:HG4_Ill_SVrefine2DISCOVARDovetail_6650:HG4_Ill_MetaSV_5272:HG3_PB_pbsv_9108:HG3_PB_SVrefine2PBcRDovetail_4200:HG3_Ill_SVrefine2DISCOVARDovetail_6847:HG3_Ill_MetaSV_5213:HG2_PB_pbsv_9341:HG2_PB_SVrefine2PBcRplusDovetail_10929:HG2_PB_SVrefine2PB10Xhap12_6837:HG2_PB_SVrefine2Falcon1plusDovetail_11731:HG2_Ill_SVrefine2DISCOVARplusDovetail_12780:HG2_Ill_MetaSV_5034;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6625:HG4_PB_pbsv_9369:HG4_PB_SVrefine2PBcRDovetail_4628:HG4_PB_SVrefine2Falcon1Dovetail_5669:HG4_Ill_SVrefine2DISCOVARDovetail_6650:HG4_Ill_MetaSV_5272:HG3_PB_pbsv_9108:HG3_PB_SVrefine2PBcRDovetail_4200:HG3_Ill_SVrefine2DISCOVARDovetail_6847:HG3_Ill_MetaSV_5213:HG2_PB_pbsv_9341:HG2_PB_SVrefine2PBcRplusDovetail_10929:HG2_PB_SVrefine2PB10Xhap12_6837:HG2_PB_SVrefine2Falcon1plusDovetail_11731:HG2_Ill_SVrefine2DISCOVARplusDovetail_12780:HG2_Ill_MetaSV_5034;NumExactMatchSVs=16;ClusterMaxShiftDist=0.000533096;ClusterMaxSizeDiff=0.000533096;ClusterMaxEditDist=0.000533096;PBcalls=9;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-11256;DistBack=4415;DistForward=-11253;DistMin=-11253;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=8:32680006-32691265;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3930.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:94:1/1:0:23:0:16:./.:0:0:0:0:1/1:0:30:1/1:0:497:11287:.:.
chr8	34022524	HG2_PB_SVrefine2Falcon1plusDovetail_11735	CTATTCTTTGTGTATGATACTGATGTGGACACTGAAATATAAATAGTGCATAAACACCTTTCTCTCCCCTTTAATTCATGGTTAGTAACATACTTTGAATTCCATAAGTCTTGTCATTAGTTAAATTATAGTGTATTCATGTATTTAAAGTCAAAGACTTTTAAGTCCACAATTTTTCATTTATACATCCCATTTACAAAATGTGAATCCTAAACTTCATGATATTTTAGGACATGGCCACGTTTAAAGTTCTATGACAATAAATATGTGGCTGGGAGTCAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6628:HG4_PB_HySA_13579:HG2_PB_assemblyticsPBcR_25527:HG4_Ill_Krunchall_13181:HG2_Ill_Krunchall_12915:HG4_Ill_MetaSV_5274:HG2_Ill_tnscope_1060:HG4_PB_pbsv_9373:HG4_PB_SVrefine2PBcRDovetail_4631:HG4_PB_SVrefine2Falcon1Dovetail_5673:HG4_Ill_scalpel_8704:HG4_Ill_manta_2274:HG4_Ill_GATKHCSBGrefine_6459:HG4_Ill_Cortex_3626:HG4_10X_allpass_1804:HG3_PB_SVrefine2Falcon1Dovetail_5666:HG2_PB_pbsv_9348:HG2_PB_SVrefine2PBcRplusDovetail_10932:HG2_PB_SVrefine2Falcon1plusDovetail_11735:HG2_Ill_manta_2654:HG2_Ill_breakscan11_1348:HG2_Ill_SpiralSDKrefine_16843:HG2_Ill_GATKHCSBGrefine_6342:HG2_Ill_Cortex_8837:HG2_10X_allpass_1549;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6628:HG4_PB_pbsv_9373:HG4_PB_SVrefine2PBcRDovetail_4631:HG4_PB_SVrefine2Falcon1Dovetail_5673:HG4_Ill_scalpel_8704:HG4_Ill_manta_2274:HG4_Ill_GATKHCSBGrefine_6459:HG4_Ill_Cortex_3626:HG4_10X_allpass_1804:HG3_PB_SVrefine2Falcon1Dovetail_5666:HG2_PB_pbsv_9348:HG2_PB_SVrefine2PBcRplusDovetail_10932:HG2_PB_SVrefine2Falcon1plusDovetail_11735:HG2_Ill_manta_2654:HG2_Ill_breakscan11_1348:HG2_Ill_SpiralSDKrefine_16843:HG2_Ill_GATKHCSBGrefine_6342:HG2_Ill_Cortex_8837:HG2_10X_allpass_1549;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0320856;ClusterMaxSizeDiff=0.0320856;ClusterMaxEditDist=0.0320856;PBcalls=9;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-281;DistBack=49580;DistForward=-282;DistMin=-282;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=8:34022525-34022810;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3931.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:0|1:23:1:2:25:./.:0:0:0:0:0/1:50:15:./.:.:.:.:.:.
chr8	35344709	HG4_Ill_Krunchall_13192	GAGATGATATTGCATGACGGTTAGTTCTTTGTGTCAATATGGCTGGTACTCAGGGCCC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1349:HG4_PB_HySA_13595:HG3_PB_HySA_14035:HG4_PB_pbsv_9382:HG2_PB_HySA_16823:HG3_PB_assemblyticsfalcon_26249:HG4_PB_assemblyticsfalcon_25788:HG4_Ill_svaba_11839:HG4_Ill_scalpel_8717:HG4_Ill_manta_2277:HG4_Ill_Krunchall_13192:HG4_Ill_GATKHC_15161:HG4_Ill_GATKHCSBGrefine_6468:HG4_Ill_Cortex_3629:HG4_Ill_250bpfermikitraw_12555:HG4_Ill_150bpfermikitraw_12033:HG3_PB_pbsv_9123:HG3_Ill_svaba_11848:HG3_Ill_manta_2170:HG3_Ill_SVrefine2DISCOVARDovetail_6863:HG3_Ill_Krunchall_12593:HG3_Ill_GATKHC_15060:HG3_Ill_GATKHCSBGrefine_6268:HG3_Ill_Cortex_3652:HG3_Ill_250bpfermikitraw_12247:HG3_Ill_150bpfermikitraw_11895:HG3_10X_allpass_1860:HG2_PB_pbsv_9357:HG2_PB_assemblyticsfalcon_26354:HG2_PB_assemblyticsPBcR_25545:HG2_Ill_svaba_11740:HG2_Ill_scalpel_8933:HG2_Ill_manta_2658:HG2_Ill_SpiralSDKrefine_16852:HG2_Ill_Krunchall_12925:HG2_Ill_GATKHC_15081:HG2_Ill_GATKHCSBGrefine_6350:HG2_Ill_Cortex_8841:HG2_Ill_250bpfermikitraw_12605:HG2_Ill_150bpfermikitraw_11850:HG2_CG_vcfBeta_5305;NumClusterSVs=41;ExactMatchIDs=HG2_CG_vcfBeta_5305:HG2_Ill_150bpfermikitraw_11850:HG2_Ill_250bpfermikitraw_12605:HG2_Ill_Cortex_8841:HG2_Ill_GATKHCSBGrefine_6350:HG2_Ill_GATKHC_15081:HG2_Ill_Krunchall_12925:HG2_Ill_SpiralSDKrefine_16852:HG2_Ill_manta_2658:HG2_Ill_scalpel_8933:HG2_Ill_svaba_11740:HG2_PB_assemblyticsPBcR_25545:HG2_PB_assemblyticsfalcon_26354:HG2_PB_pbsv_9357:HG3_10X_allpass_1860:HG3_Ill_150bpfermikitraw_11895:HG3_Ill_250bpfermikitraw_12247:HG3_Ill_Cortex_3652:HG3_Ill_GATKHCSBGrefine_6268:HG3_Ill_GATKHC_15060:HG3_Ill_Krunchall_12593:HG3_Ill_SVrefine2DISCOVARDovetail_6863:HG3_Ill_manta_2170:HG3_Ill_svaba_11848:HG3_PB_pbsv_9123:HG4_Ill_150bpfermikitraw_12033:HG4_Ill_250bpfermikitraw_12555:HG4_Ill_Cortex_3629:HG4_Ill_GATKHCSBGrefine_6468:HG4_Ill_GATKHC_15161:HG4_Ill_Krunchall_13192:HG4_Ill_manta_2277:HG4_Ill_scalpel_8717:HG4_Ill_svaba_11839:HG4_PB_assemblyticsfalcon_25788;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0347826;PBcalls=10;Illcalls=29;TenXcalls=1;CGcalls=1;PBexactcalls=5;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=1;HG2count=16;HG3count=13;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-57;DistBack=21750;DistForward=8209;DistMin=8209;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=8:35344710-35344768;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3932.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:83:./.:2:0:2:80:./.:0:0:0:0:1/1:0:43:./.:.:.:.:.:.
chr8	37050879	HG4_Ill_GATKHCSBGrefine_6469	TGATTTTTGTAGGGGTGGGTTGCCCCTACACACCTGTGGGTGTTTCTCGTAAGGTGGGACGAGAGATTTGGAAAAGAAAAAGACACAGAGACAAAGTATAGAGAAAGAAATAAGGGGACCCGGGGAACCAGCGTTCAGCATATGGAGGATCCCGCCAGCCTCTGAGTTCCCTTAGTATTTATTGATCATCTGTGGGTGTTTCTCAAAGAGGGGGATGTGTCAGGGTCACAAGACAATTGTGGGGAGAGGGTCAGCAGACAAACACGTGAACAAAGGTCTTGGCATCATAGACAATGTAAAGGATTAAGTGCTGTGCTTTTAGATATGCATACACATAAACATCTCAGTGCTTTACAAAGCAGTATTGCTGCCCGCAGGTCCCACCTCCAGCCCTAAGGCGGTTTTTCCCTATCTCAGTAGATGGAGCATACAATCGGGTTTTATACCGAGACATTCCATTGCCCAGGGACAGGCAGGAGACAGATGCCTTCCTCTTGTCTCAACTGCAAGAGGCATTCCTTCCTCTTTTACTAATCCTCCTCAGCACAGACCCTTTACGGGTGTCGGGCTGGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCGGCCTTCCGCAGTTTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCCTGCACCGCCCTTAATCCATTCAACTCTGAGTTGACACAGCACACGTTTCAGAGAGCACGGGGTTGGGGGTAAGGTCATAGATTAACAGAATCTCAAGGCAGAAGAATTTTTCTTAGTACATAACAAAATGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTGCTTTTCCCCACA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1350:HG4_PB_assemblyticsfalcon_25795:HG2_PB_assemblyticsfalcon_26363:HG3_PB_assemblyticsfalcon_26255:HG2_PB_assemblyticsPBcR_25555:HG2_Ill_Krunchall_12932:HG4_Ill_Krunchall_13200:HG3_Ill_Krunchall_12600:HG2_Ill_Krunchall_12931:HG4_Ill_Spiral_765:HG3_Ill_Spiral_9841:HG2_Ill_Spiral_655:HG2_Ill_tnscope_1061:HG4_PB_pbsv_9385:HG4_PB_SVrefine2PBcRDovetail_4637:HG4_PB_SVrefine2Falcon1Dovetail_5681:HG4_Ill_manta_2278:HG4_Ill_SVrefine2DISCOVARDovetail_6667:HG4_Ill_MetaSV_5276:HG4_Ill_GATKHCSBGrefine_6469:HG4_10X_allpass_1805:HG3_PB_pbsv_9126:HG3_PB_SVrefine2PBcRDovetail_4205:HG3_PB_HySA_14044:HG3_Ill_manta_2171:HG3_Ill_SVrefine2DISCOVARDovetail_6868:HG3_Ill_MetaSV_5216:HG3_Ill_GATKHCSBGrefine_6269:HG3_10X_allpass_1861:HG2_PB_pbsv_9360:HG2_PB_SVrefine2PBcRplusDovetail_10940:HG2_PB_SVrefine2PB10Xhap12_6848:HG2_PB_SVrefine2Falcon1plusDovetail_11743:HG2_Ill_manta_2659:HG2_Ill_SpiralSDKrefine_16855:HG2_Ill_SVrefine2DISCOVARplusDovetail_12795:HG2_Ill_MetaSV_5039:HG2_Ill_GATKHCSBGrefine_6352:HG2_10X_allpass_1552:HG2_10X_SVrefine210Xhap12_6637;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6637:HG2_10X_allpass_1552:HG2_Ill_GATKHCSBGrefine_6352:HG2_Ill_MetaSV_5039:HG2_Ill_SVrefine2DISCOVARplusDovetail_12795:HG2_Ill_SpiralSDKrefine_16855:HG2_Ill_manta_2659:HG2_PB_SVrefine2Falcon1plusDovetail_11743:HG2_PB_SVrefine2PB10Xhap12_6848:HG2_PB_SVrefine2PBcRplusDovetail_10940:HG2_PB_pbsv_9360:HG3_10X_allpass_1861:HG3_Ill_GATKHCSBGrefine_6269:HG3_Ill_MetaSV_5216:HG3_Ill_SVrefine2DISCOVARDovetail_6868:HG3_Ill_manta_2171:HG3_PB_HySA_14044:HG3_PB_SVrefine2PBcRDovetail_4205:HG3_PB_pbsv_9126:HG4_10X_allpass_1805:HG4_Ill_GATKHCSBGrefine_6469:HG4_Ill_MetaSV_5276:HG4_Ill_SVrefine2DISCOVARDovetail_6667:HG4_Ill_manta_2278:HG4_PB_SVrefine2Falcon1Dovetail_5681:HG4_PB_SVrefine2PBcRDovetail_4637:HG4_PB_pbsv_9385;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0113111;ClusterMaxSizeDiff=0.0113111;ClusterMaxEditDist=0.0113111;PBcalls=14;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-974;DistBack=42888;DistForward=-969;DistMin=-969;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=8:37050880-37051859;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3933.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:83:1/1:0:30:0:41:./.:0:0:0:0:1/1:0:28:1/1:3:65:.:.:.
chr8	38365391	HG3_PB_assemblyticsfalcon_26260	TCTTCCCCTCTTCTCCTCTCTTCTCTTCTCCCCTCCTCTCCCCTCCCCTCCCCTTCCCTCCCCTTCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6644:HG4_PB_pbsv_9390:HG2_PB_pbsv_9367:HG4_Ill_svaba_11847:HG4_Ill_scalpel_8722:HG4_Ill_GATKHC_15177:HG4_Ill_GATKHCSBGrefine_6471:HG3_PB_pbsv_9130:HG3_PB_assemblyticsfalcon_26260:HG3_PB_HySA_14052:HG3_Ill_svaba_11859:HG3_Ill_scalpel_9046:HG3_Ill_GATKHC_15078:HG3_Ill_GATKHCSBGrefine_6272:HG2_Ill_svaba_11748:HG2_Ill_scalpel_8943:HG2_Ill_GATKHC_15097:HG4_Ill_SVrefine2DISCOVARDovetail_6673:HG3_PB_SVrefine2PBcRDovetail_4209:HG2_PB_SVrefine2PBcRplusDovetail_10945:HG2_PB_SVrefine2PB10Xhap12_6853;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHC_15097:HG2_Ill_scalpel_8943:HG2_Ill_svaba_11748:HG3_Ill_GATKHCSBGrefine_6272:HG3_Ill_GATKHC_15078:HG3_Ill_scalpel_9046:HG3_Ill_svaba_11859:HG3_PB_HySA_14052:HG3_PB_assemblyticsfalcon_26260:HG3_PB_pbsv_9130:HG4_Ill_GATKHCSBGrefine_6471:HG4_Ill_GATKHC_15177:HG4_Ill_scalpel_8722:HG4_Ill_svaba_11847;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0615385;ClusterMaxEditDist=0.170543;PBcalls=8;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-66;DistBack=13846;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=84;REFWIDENED=8:38365387-38365536;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3934.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:./.:16:6:5:23:./.:0:0:0:0:0/1:8:8:./.:.:.:.:.:.
chr8	38414218	HG2_Ill_GATKHC_15101	TTCTTCTTCCTCTTCTTCTTCCTCTTCTTCTTCCTCTTCTTCTTCCTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_9371:HG4_PB_SVrefine2Falcon1Dovetail_5689:HG2_PB_SVrefine2PB10Xhap12_6856:HG4_Ill_SVrefine2DISCOVARDovetail_6678:HG4_Ill_svaba_11851:HG3_PB_assemblyticsfalcon_26263:HG4_Ill_250bpfermikitraw_12576:HG3_Ill_svaba_11861:HG3_Ill_Krunchall_12611:HG3_Ill_GATKHC_15082:HG3_Ill_GATKHCSBGrefine_6276:HG3_Ill_250bpfermikitraw_12264:HG2_Ill_svaba_11750:HG2_Ill_GATKHC_15101:HG3_Ill_SVrefine2DISCOVARDovetail_6877:HG2_PB_SVrefine2Falcon1plusDovetail_11750:HG3_PB_pbsv_9133:HG4_PB_HySA_13612;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHC_15101:HG2_Ill_svaba_11750:HG3_Ill_250bpfermikitraw_12264:HG3_Ill_GATKHCSBGrefine_6276:HG3_Ill_GATKHC_15082:HG3_Ill_Krunchall_12611:HG3_Ill_svaba_11861;NumExactMatchSVs=7;ClusterMaxShiftDist=0.371257;ClusterMaxSizeDiff=0.371257;ClusterMaxEditDist=0.387879;PBcalls=7;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-96;DistBack=-34;DistForward=-93;DistMin=-93;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=151;REFWIDENED=8:38414097-38414343;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3935.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:0|1:22:4:4:22:./.:0:0:0:0:0/1:13:14:./.:.:.:.:.:.
chr8	38953622	HG2_PB_PB10Xdip_29986	TAGTTGTACATATCACATGGGGTACATGTGATATTTTGAAACAAGCATATAGTGTGTAATGATCAAATCAGGGTAATTGGGATAGTCATCACCTCAAGGATTTATCATTTCTATGTTAGGAACATTCCAACTCTACTCTTTTAGCTATTTTGAAATATACAATAAATTAATCATTTTCTTTGTTTTTTTGTAGTAATATTTTGATTCTCATTTTCCTTTGTGCATATTCTATAGCACATATATTGTGATATCTTTGCAAT	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_12952:HG3_Ill_GATKHCSBGrefine_6280:HG2_Ill_GATKHCSBGrefine_6361:HG2_Ill_tnscope_1062:HG3_Ill_manta_2172:HG2_PB_PB10Xdip_29986:HG2_Ill_manta_2663:HG2_10X_SVrefine210Xhap12_6649:HG3_Ill_Spiral_9852:HG2_PB_pbsv_9376:HG3_Ill_scalpel_9055:HG3_10X_allpass_1863:HG2_Ill_SpiralSDKrefine_16863:HG3_PB_pbsv_9137:HG3_Ill_MetaSV_5220:HG2_Ill_MetaSV_5044:HG3_Ill_Krunchall_12621;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6649:HG2_Ill_manta_2663:HG2_PB_PB10Xdip_29986:HG3_Ill_manta_2172;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0782123;ClusterMaxSizeDiff=0.0782123;ClusterMaxEditDist=0.0782123;PBcalls=3;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-259;DistBack=27427;DistForward=-260;DistMin=-260;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:38953622-38953881;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9961;PctRecOverlap=0.9885;SizeDiff=1;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=99;MatchId=3936.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:22:./.:4:15:13:6:./.:0:0:0:0:0/1:60:15:./.:.:.:.:.:.
chr8	39008356	HG4_Ill_Krunchall_13215	AATATTTCATAATTCTGCCAAATTTTATTTTTAAAAGTAAAGTTTCTTATTATATACATTTGTCATATATGCAGTATAATCATTTTTCAAAAGCATGGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6650:HG4_Ill_Spiral_766:HG3_Ill_Spiral_9853:HG2_Ill_Spiral_656:HG4_Ill_manta_2284:HG3_Ill_manta_2173:HG2_Ill_manta_2664:HG3_Ill_MetaSV_5221:HG4_Ill_Krunchall_13216:HG3_Ill_Krunchall_12623:HG2_Ill_Krunchall_12953:HG2_PB_pbsv_9377:HG3_PB_pbsv_9138:HG4_PB_pbsv_9399:HG4_PB_SVrefine2PBcRDovetail_4646:HG4_PB_SVrefine2Falcon1Dovetail_5693:HG4_Ill_svaba_11858:HG4_Ill_SVrefine2DISCOVARDovetail_6683:HG4_Ill_Krunchall_13215:HG4_Ill_250bpfermikitraw_12585:HG4_Ill_150bpfermikitraw_12056:HG3_PB_SVrefine2PBcRDovetail_4214:HG3_Ill_svaba_11868:HG3_Ill_SVrefine2DISCOVARDovetail_6882:HG3_Ill_Krunchall_12622:HG2_PB_SVrefine2PBcRplusDovetail_10952:HG2_PB_SVrefine2PB10Xhap12_6861:HG2_PB_SVrefine2Falcon1plusDovetail_11754:HG2_Ill_svaba_11756:HG2_Ill_SVrefine2DISCOVARplusDovetail_12812;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6650:HG4_PB_SVrefine2PBcRDovetail_4646:HG4_PB_SVrefine2Falcon1Dovetail_5693:HG4_Ill_svaba_11858:HG4_Ill_SVrefine2DISCOVARDovetail_6683:HG4_Ill_Krunchall_13215:HG4_Ill_250bpfermikitraw_12585:HG4_Ill_150bpfermikitraw_12056:HG3_PB_SVrefine2PBcRDovetail_4214:HG3_Ill_svaba_11868:HG3_Ill_SVrefine2DISCOVARDovetail_6882:HG3_Ill_Krunchall_12622:HG2_PB_SVrefine2PBcRplusDovetail_10952:HG2_PB_SVrefine2PB10Xhap12_6861:HG2_PB_SVrefine2Falcon1plusDovetail_11754:HG2_Ill_svaba_11756:HG2_Ill_SVrefine2DISCOVARplusDovetail_12812;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0502513;ClusterMaxSizeDiff=0.0502513;ClusterMaxEditDist=0.0502513;PBcalls=9;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-98;DistBack=54404;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=99;REFWIDENED=8:39008357-39008553;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3937.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:62:1/1:3:24:4:33:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr8	39553789	HG2_Ill_150bpfermikitraw_11880	ATATTTTGGATATTAATTCCTTATCATATATGTGATTTGCTATTTTTCCAT	A	20	PASS	ClusterIDs=HG2_10X_allpass_1554:HG3_Ill_svaba_11878:HG3_Ill_250bpfermikitraw_12281:HG3_Ill_150bpfermikitraw_11927:HG2_Ill_svaba_11766:HG2_Ill_250bpfermikitraw_12636:HG2_Ill_150bpfermikitraw_11880:HG3_Ill_manta_2174:HG2_Ill_manta_2665:HG3_10X_allpass_1864;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11880:HG2_Ill_250bpfermikitraw_12636:HG2_Ill_svaba_11766:HG3_Ill_150bpfermikitraw_11927:HG3_Ill_250bpfermikitraw_12281:HG3_Ill_svaba_11878;NumExactMatchSVs=6;ClusterMaxShiftDist=0.228571;ClusterMaxSizeDiff=0.228571;ClusterMaxEditDist=0.228571;PBcalls=0;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=32671;DistForward=-32;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:39553788-39553841;PctSeqSimilarity=0.8409;PctSizeSimilarity=0.72;PctRecOverlap=0.7255;SizeDiff=14;StartDistance=-14;EndDistance=0;GTMatch=0;TruScore=76;MatchId=3938.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:./.:12:9:15:14:./.:0:0:0:0:0/1:26:29:./.:.:.:.:.:.
chr8	39737280	HG2_Ill_GATKHCSBGrefine_6366	ACTACCTGTCAGATGGTCTGGAGGAAATTTGGCCCTGTAAATAGGGATTTGGCCACTTGATGAGTGTTTTCAATACCCATATGAAAAGTTTGGTGGAGGGTTTTAAGTATTTTCCACTGGCTGTCTTTGGGTATAAGTACCTTTCCTTCTTCTGTCATTAACCACCCTGAGGGGAGAAAACTATGCCCCCGCGAAAGTTCCCATTCTGTTTCAGTTGGGGAATACTGGGGC	A	20	PASS	ClusterIDs=HG2_PB_HySA_16869:HG4_Ill_MetaSV_5281:HG4_PB_pbsv_9401:HG4_PB_assemblyticsfalcon_25816:HG4_PB_SVrefine2PBcRDovetail_4647:HG4_PB_SVrefine2Falcon1Dovetail_5694:HG4_Ill_svaba_11865:HG4_Ill_scalpel_8733:HG4_Ill_manta_2285:HG4_Ill_SVrefine2DISCOVARDovetail_6686:HG4_Ill_GATKHCSBGrefine_6481:HG4_10X_allpass_1808:HG3_PB_assemblyticsfalcon_26275:HG2_PB_pbsv_9380:HG2_PB_assemblyticsfalcon_26387:HG2_PB_SVrefine2PBcRplusDovetail_10953:HG2_PB_SVrefine2PB10Xhap12_6862:HG2_PB_SVrefine2Falcon1plusDovetail_11755:HG2_Ill_svaba_11768:HG2_Ill_breakscan11_1351:HG2_Ill_SpiralSDKrefine_16870:HG2_Ill_SVrefine2DISCOVARplusDovetail_12815:HG2_Ill_MetaSV_5045:HG2_Ill_GATKHCSBGrefine_6366:HG2_10X_SVrefine210Xhap12_6651:HG2_PB_assemblyticsPBcR_25574;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6651:HG2_Ill_GATKHCSBGrefine_6366:HG2_Ill_MetaSV_5045:HG2_Ill_SVrefine2DISCOVARplusDovetail_12815:HG2_Ill_SpiralSDKrefine_16870:HG2_Ill_breakscan11_1351:HG2_Ill_svaba_11768:HG2_PB_SVrefine2Falcon1plusDovetail_11755:HG2_PB_SVrefine2PB10Xhap12_6862:HG2_PB_SVrefine2PBcRplusDovetail_10953:HG2_PB_assemblyticsfalcon_26387:HG2_PB_pbsv_9380:HG3_PB_assemblyticsfalcon_26275:HG4_10X_allpass_1808:HG4_Ill_GATKHCSBGrefine_6481:HG4_Ill_SVrefine2DISCOVARDovetail_6686:HG4_Ill_manta_2285:HG4_Ill_scalpel_8733:HG4_Ill_svaba_11865:HG4_PB_SVrefine2Falcon1Dovetail_5694:HG4_PB_SVrefine2PBcRDovetail_4647:HG4_PB_assemblyticsfalcon_25816:HG4_PB_pbsv_9401;NumExactMatchSVs=23;ClusterMaxShiftDist=0.00431965;ClusterMaxSizeDiff=0.00431965;ClusterMaxEditDist=0.00863931;PBcalls=12;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-230;DistBack=36802;DistForward=6463;DistMin=6463;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:39737281-39737510;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3939.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:1|0:3:23:21:0:./.:0:0:0:0:0/1:54:17:./.:.:.:.:.:.
chr8	39765314	HG2_Ill_GATKHCSBGrefine_6367	TAAGAAATAATATTTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGAACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTAGTGGCGCGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCAGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6652:HG4_Ill_Krunchall_13222:HG2_Ill_Krunchall_12963:HG2_PB_assemblyticsPBcR_25575:HG4_PB_assemblyticsfalcon_25817:HG3_PB_assemblyticsfalcon_26276:HG2_PB_assemblyticsfalcon_26388:HG4_PB_pbsv_9402:HG2_PB_pbsv_9381:HG4_PB_HySA_13617:HG2_PB_HySA_16872:HG4_Ill_MetaSV_5282:HG3_PB_HySA_14058:HG3_Ill_MetaSV_5222:HG2_PB_HySA_16871:HG2_Ill_tnscope_1063:HG4_Ill_scalpel_8734:HG4_Ill_manta_2286:HG4_Ill_GATKHCSBGrefine_6482:HG4_10X_allpass_1809:HG3_Ill_manta_2175:HG3_Ill_GATKHCSBGrefine_6285:HG3_10X_allpass_1865:HG2_Ill_manta_2666:HG2_Ill_MetaSV_5046:HG2_Ill_GATKHCSBGrefine_6367:HG2_10X_allpass_1555:HG3_PB_pbsv_9139:HG4_PB_SVrefine2PBcRDovetail_4648:HG4_PB_SVrefine2Falcon1Dovetail_5695:HG4_Ill_SVrefine2DISCOVARDovetail_6687:HG3_PB_SVrefine2PBcRDovetail_4215:HG2_PB_SVrefine2PBcRplusDovetail_10954:HG2_PB_SVrefine2PB10Xhap12_6863:HG2_PB_SVrefine2Falcon1plusDovetail_11756:HG2_Ill_SVrefine2DISCOVARplusDovetail_12817;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_1555:HG2_Ill_GATKHCSBGrefine_6367:HG2_Ill_MetaSV_5046:HG2_Ill_manta_2666:HG3_10X_allpass_1865:HG3_Ill_GATKHCSBGrefine_6285:HG3_Ill_manta_2175:HG4_10X_allpass_1809:HG4_Ill_GATKHCSBGrefine_6482:HG4_Ill_manta_2286:HG4_Ill_scalpel_8734;NumExactMatchSVs=11;ClusterMaxShiftDist=0.120556;ClusterMaxSizeDiff=0.120556;ClusterMaxEditDist=0.120556;PBcalls=17;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-332;DistBack=7966;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=8:39765311-39765662;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3940.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:75:1/1:0:39:0:17:./.:0:0:0:0:1/1:0:60:./.:2:10:.:.:.
chr8	39976061	HG2_CG_vcfBeta_5324	CCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCCGGCCAATACTTTCTTAACTATAGTCTGTGTGGCTTA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_9140:HG2_PB_pbsv_9382:HG3_PB_HySA_14062:HG3_Ill_svaba_11884:HG3_Ill_scalpel_9065:HG3_Ill_SVrefine2DISCOVARDovetail_6888:HG3_Ill_Krunchall_12640:HG3_Ill_GATKHC_15106:HG3_Ill_GATKHCSBGrefine_6286:HG3_Ill_250bpfermikitraw_12289:HG3_Ill_150bpfermikitraw_11934:HG3_CG_vcfBeta_5073:HG3_10X_allpass_1866:HG2_Ill_svaba_11772:HG2_Ill_scalpel_8961:HG2_Ill_manta_2667:HG2_Ill_Krunchall_12968:HG2_Ill_GATKHC_15125:HG2_Ill_GATKHCSBGrefine_6369:HG2_Ill_250bpfermikitraw_12643:HG2_CG_vcfBeta_5324:HG2_10X_SVrefine210Xhap12_6655:HG2_Ill_breakscan11_1352;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6655:HG2_CG_vcfBeta_5324:HG2_Ill_250bpfermikitraw_12643:HG2_Ill_GATKHCSBGrefine_6369:HG2_Ill_GATKHC_15125:HG2_Ill_Krunchall_12968:HG2_Ill_manta_2667:HG2_Ill_scalpel_8961:HG2_Ill_svaba_11772:HG3_10X_allpass_1866:HG3_CG_vcfBeta_5073:HG3_Ill_150bpfermikitraw_11934:HG3_Ill_250bpfermikitraw_12289:HG3_Ill_GATKHCSBGrefine_6286:HG3_Ill_GATKHC_15106:HG3_Ill_Krunchall_12640:HG3_Ill_SVrefine2DISCOVARDovetail_6888:HG3_Ill_scalpel_9065:HG3_Ill_svaba_11884:HG3_PB_HySA_14062;NumExactMatchSVs=20;ClusterMaxShiftDist=0.021978;ClusterMaxSizeDiff=0.021978;ClusterMaxEditDist=0.0441989;PBcalls=3;Illcalls=16;TenXcalls=2;CGcalls=2;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=2;HG2count=11;HG3count=12;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-90;DistBack=1373;DistForward=-68;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=8:39976062-39976153;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3941.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:39:1|0:4:25:26:7:./.:0:0:0:0:0/1:38:14:./.:.:.:.:.:.
chr8	40469734	HG2_10X_SVrefine210Xhap12_6657	ATTCATATCCTCTGTCTTCTTTCTCTTAGAACTGTGTGCATGCTAAATCATATCTGCTACTGCTCTGGGGCAATAGTACAGACCCCAGGACCATTTTGTGTGTCAATACAAATAATGAGCAGGAAATGCAGGTTCTATGCCATATAAGCTACTAGTGACAACCACAGAAAATTTCTAAGTTGTCCATAGCACTGGCAACCCATCCAAATTTCCTTTATGGACCCTGGCTTCCCATGCACACACAGTATCCATTCCTTAAAAGTGTGTATTCCTCAAGTTCCTGTGCTTTGTTTGCTTTTCTTCTTGCTCTTATCTTGTCACTGATTTTTTCCACTCATAGACTTCTGTCATGACCTTGTGTTTATGATCTGAAGTCCATATGTTTGTCCCGGTTTTCCTGCTAAGTTCCAGACTCATATATCCAACGAATACCTGATATCTTCACCTGAGTGACCTCAAACTCAACATGACCAAAGCATCTGTGCTACCTCATTCTACTCAATCCCCTCCCCTACCTCCCTAAAAACATGTTCCTTATATTTTGTATACTTTATTCAATGGGTTTCTACCCAGTCATTCTCTGTATTTTGGTTTTTGTTTTTTTTTTTTTTTTTTGAGACGAAGTCTTGCTCTTGTCCCCCAGGCTGGAG	A	20	PASS	ClusterIDs=HG4_10X_allpass_1810:HG4_Ill_Krunchall_13231:HG2_Ill_Krunchall_12973:HG2_Ill_tnscope_1064:HG4_PB_assemblyticsfalcon_25821:HG4_PB_SVrefine2PBcRDovetail_4650:HG4_PB_SVrefine2Falcon1Dovetail_5696:HG4_Ill_manta_2288:HG4_Ill_SVrefine2DISCOVARDovetail_6689:HG4_Ill_MetaSV_5284:HG4_Ill_GATKHCSBGrefine_6486:HG3_PB_assemblyticsfalcon_26279:HG3_PB_SVrefine2Falcon1Dovetail_5669:HG2_PB_pbsv_9384:HG2_PB_assemblyticsfalcon_26396:HG2_PB_assemblyticsPBcR_25584:HG2_PB_SVrefine2PBcRplusDovetail_10957:HG2_PB_SVrefine2Falcon1plusDovetail_11758:HG2_Ill_SpiralSDKrefine_16875:HG2_Ill_MetaSV_5047:HG2_Ill_GATKHCSBGrefine_6372:HG2_10X_allpass_1556:HG2_10X_SVrefine210Xhap12_6657:HG4_PB_pbsv_9404;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6657:HG2_10X_allpass_1556:HG2_Ill_GATKHCSBGrefine_6372:HG2_Ill_MetaSV_5047:HG2_Ill_SpiralSDKrefine_16875:HG2_PB_SVrefine2Falcon1plusDovetail_11758:HG2_PB_SVrefine2PBcRplusDovetail_10957:HG2_PB_assemblyticsPBcR_25584:HG2_PB_assemblyticsfalcon_26396:HG2_PB_pbsv_9384:HG3_PB_SVrefine2Falcon1Dovetail_5669:HG3_PB_assemblyticsfalcon_26279:HG4_Ill_GATKHCSBGrefine_6486:HG4_Ill_MetaSV_5284:HG4_Ill_SVrefine2DISCOVARDovetail_6689:HG4_Ill_manta_2288:HG4_PB_SVrefine2Falcon1Dovetail_5696:HG4_PB_SVrefine2PBcRDovetail_4650:HG4_PB_assemblyticsfalcon_25821;NumExactMatchSVs=19;ClusterMaxShiftDist=0.11611;ClusterMaxSizeDiff=0.11611;ClusterMaxEditDist=0.11611;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-649;DistBack=-209;DistForward=-648;DistMin=-648;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:40469735-40470384;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3942.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:19:./.:13:14:14:1:./.:0:0:0:0:0/1:38:16:0/1:55:11:.:.:.
chr8	40774405	HG2_PB_SVrefine2PBcRplusDovetail_10961	GTTTTTATTTTTTGAGATAGAGTCTCACTCTGTGGCCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGTGCCCGCCACCGCACCCAGCTAATTTTTGTATTTATAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAGCTCCTGACCTCAAGTAATCCACCCACCTCGACCTCCCAAAGTGCTGAGATTACAGGCATGAGCCACCGTGCCGGGCCAATATGTATCATAAGTTATCTATTACATAATATATATTAGTGTCGGGACTAAAATCACAAGATTCTACACTTGACCACTCTGCACCTCTGTTCCCATTCAGTAAAATAGGCATTGTAATAGGTCCTAACTTAACAGTGTTATTGGAAGGGTTAAGTGAGTGAACACATATAAAGCATTTACATACTAGCTGGCAAAAAGCTCCACAAATATTGTCGCCATATGGCAAGGTCCCCTTTATGACATCAGCCCTCGATTCATGATGGGCATTGTGTCATTCATTTCCTCAGCGATGATCAAGAATCACAGATGCAGATGTCTGGTGGCATTTCAGGGGTGCTACAGGAATGGAGCCCCTGCAATATGCCGAGAAGAAACAACGTGTAGCCTGCAAGATCCTCATCTTTCAGAGAGAGCAACAGGAGCGTGGTCTCTTCCTGCTCTCTCAGCTGAGATGGTCTCAATGCCTGGCCTCTTATTTTCAAAATATGGTGTGGGCCTCCTTTAGAGAAGAGGAGGTACTGATGGTTATTGAACCAAACTGGGGCTCACTGGCCTTGTGCAGCAAAGCCAAACACTGATGCTGGCCCTGCAGGGAGAGAAAGCGAGGCATTTATTACAGGGCAGCAAGCAAGGAGGATCGGGCAGCTCATGCTTAAGACTAGAGCTCTCAGATGGGTTACAGGTAAGGGCTTTGAAAGGCAGGGAGGCAGAGGGTACAGGCAAAGTCCTAAGTCAGTACTTGGAGGCTATACATTGGTTTGACCCAAAAACAGACCTCGAAGCGAGGGCAGGTCATAGGTGGATGCAAAGCTTTTCTGGTTCACAATTGGTTAAGGAATCAAAGTTTTGTCTAAAAATTTGGGATCAGCAGAAAAACAATGTTAGCTCTGGCTCCTGGGTGTGACCTCCTCCAGGCCCCTTAGGAAGAAATTTAGAACGCAGAACAGCGGTCAGAGCTCAGTCCTTAGTTTCTCCTTATCTGAGGTCTGTGTGTCAGCAGATCTATTGAGAAGGGGGTCCCGGTTTGTGAAAAACAACCCAGGGACATATGCTAAGATGTTACCTTCAGTTTCCATAGGGAACCAAACATCTCCTGCCTCCCACGTCCTTGGCTGCTGCCTTAGGCTGCTATTACCTTATTGTTTATCTAGTTGCTGATTTACTTCTCGAGGCTAGCTGGGTGCCTGGAATTTCCCTTGAAGGAACTCTAGATTTTTCTTTATTTCCATGCTTGGGGGACCCCACAGGTCCCTAAGGCGGGGCTTGGGGGGTGGGGGTCCTTGCTCTGTCTCACAATGTAATAGGGTGATGAAGGTGCTGGACTCAGATGGGAAGACACAGGTTCCAGCAGCAAGGCAGATACTTGACTAATGCCTGGCTCTCTGCCTCCTCACCTGTTTAATGACAGTTTATTTTCAGGGTAAATACAAAACACAATTCCCCAACAATCTTACTTTTGGATGTAATTTTCAGATCTTCTCCTGGGAGTGGGACAGGGGAGCAAGAGAAAATAAAAAGAACAGAGAGTGGGGAGGGGCAAAGATGTCAATGAGAGCTTCACAGAGGATCTTTCTTCTGGGCACAAGAAAAGAATCACATCCATCCTGGGGAAACTCCTGTGAAGTTCATTCAAACTGCAGTATTGCCTAATCAGCATCTCTGAAAAAAACACAGTGGAAGGACCCCCAGGCACACATTAGAGTGTCCAGGCTTCATGGCTGCGGCACCTGCACGTTTGAGAGCAAACAGCTCACTCCAAAGCATTGACTCAGCAGCCACAGCAATGGGCATTCTGCTTAAAAAGAAAAACACCTGTTTGTATATAGCAGTCATGCTGTGTCAAGAAGGGGAAGATGAACAGGAGCAGAGGTGGGCAGAGCGTGTTGCCGAGTGGTCCCCAGCACACAGCTCCAGATGTGGCCAGGAGCTCTTTACTGCCTAAAAGTTTTAGAGCATTTGGGGAAGGCTTTTCAACTCAATTAGCATTTAATAGTCCTGATGTTCAATCTCAGGGATCAGCTGTGAAGTTACTAAAGCCATTGCCATGAGGCTAGAGTAGCCAGTTGTGTTTGAAATGTCAACGCCTTTCCCCTGACACTACCTTCTCCCTCCTGGCAGTCCCGCCCAACTTGAGGTCCTGATATTTAGTAACATTTCCCAAGGGCAGGTGGTCATCCTTCAGTCTTGAAAGCAGGGCCCTTGAAGAAGCCATGGAGTCAACTCAAGCTTTACTCTGTACCTGGGAAAGCAAGCCAATGTCAGAGAGTCGAGAGCAGGCTGGGGACCTGGGCACCACAAATGGGTGAATCCCAAAACAAGGGAGCGCCTTCTCCCATGAGGTCAGGGGGTTCTAACTGACCTAGTTGTCTAGCTAACGAAATGAGCAAACTCCCAAAAAGCACTGAAAGTAGTTGCCTCTATATGATGGGATTATGGTTGAAATTTGTTTCCTTTTTTTATGTTTTCAGTATTTTCTGAATTCCTTACATTGAGAATAAGTTATTTTATAAACAGAACAAATTGCACATCATTTATATACTAAAACCCACATAATCCTTTTCCAGCTGAACACCTCCCGAGCAGATGGCATCAGAGAGAAGCTGGATGTTTTTCCTCAAATGGATTAAGAAAGCAGAAGCTTCTGCCAGGGGTAACAATGCCACTTGTGGGCACCACTGATTTTTAAAGCACTCCACATTCATTAGCTCATGGAGCCTTCGCAGCATCCCTGGAAGGCAAGATGTTGGTAGGTATTATTCCCATTTCAGAGAGGAGAAACAGGGTCAGAGAGCCACCTCATTCTGTCATCAAAAGGGTCACTACTGAAATCTGGAGCACTCACTTGGAGCTCAAGTTTCCCTGGACCAGAGCTGCATGGCACTAGGACATTTCTCATCTGCAACACACACCCATGCCCACAAACCCTTGTATACATAAGCCCACAGCTTGCATGCGCCCAGCCATCTGAGTCTGGGACTTTCGTAGGAGTCAAAATGGAATTGTGCAACTCCAACCATGATGCTGGATGCTCCTCTCTGCCTCACCTTGTTTTCCTTCCAAGGTGGGGAAAGTGTGGTGGTCAGTAGAACTGGGGCTTTCTCATCTTTGGATGGTCAGCGGCAAAGACCCTGGGTGAGCCGCCCGGCCATGAGCTGTTCATTGCATCTGTCACATAACATTTCTATAAGACTGTGTGTCTTATAGAATCAGGAGCTCAGGCTCGTATCTGGACAAATAAGAGAATGCCTCCCCACGATAGCCCTCTTCTCTGTAGGCTGTATCTTTTTCTAATCACTTTGGCAGGTGAAAGTGTTTTTTTCCTCTAAATGAGTCAGATGGGCTGGGAATGTGTAACTTGGAAAAGAAGATGCTCTCATACCTGTACATAAAAAAGACAGACTGCCAGTTACCTCAGCCTTACCACCTGTGCTGGGCACCCGTTCAGAGCTCCTGAATGATTCCATTAGTGGGGAACTCTTAGTTGATAGGTATGAATTAGTTAACTAATAAAACTCTATGCTATGCCAGCCAAAGACTAATTAATAGTGTCTCAAAAGACATGTATTTTGCTCATTTTTAAATTTTTGTGCAGATGGGGTTCTTTTCAACTCTGACCCGAGTTAGAAGTTATTTTTCTCACCTAAATGCTCAGAATATAAATCTCAGCCTCAAGAGAATGTGAGCAACAGATCAGACACAAACAGACCCAAGAAAGAGAAAAAAGGAGAGAGCTAGAAAACCGAATCAAGAGGCAAAAAACACATTTTGCAGAGAGCATTAAGGGCAAACCAGTATTTCAATGTCATTGAAGGTAACATTACTTAAAACAGAGCTATGAGCTACTATAACTACAGGGACTGGAAGTCTCTGTAATTAGTAAATATGTTGCATGCATCACCCCAACATAGAATCACCTGAGATAAGTAGGGGGATGAGATACTAAAGATCAACAGAGCCTGAATTTTGAATGAGGGGAACTCTGAACTAGGCAAGAATGGAGATTATTACACAGGACACAAGGCTTAAAGTCCAGCCATCCTTGTGAAAAAGAACAGAAGGTTAACACTAGAACTTTCGTAAAAATAACTTAGGTTTTTTTCAATTAATCCTTTTGTTATCTTGGTAAAAAGTGGGGAGGAGGCCGGGTGCAGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGTCGAGGCAGGAGGATCATTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCTGGGCGTGGTAGCACGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATCACTTGAACCAGGGAGACAGAGATTGCAGTGATCCGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTTAGTCTCGAAAAAAACAGTGAGGAGGAACAACTTTAGTAATTGTTATGATCAATATCTGGACTAGGTGTGTCTCATTGGCAACTGCAGATAATGATATCATAAACCATCCACTGAGTATCATAATACGCTGGTCACTGTGCAGGATGCTTTAAAAATATTGAAGTGGATCTTCTCAGCATCATGTGACATAGGCATGATGACTTCCAACTTACAGAACGGTACACTGGGGCTCAGAGAGAAGATGTGATTCACTATTGTAAACAAAATACAGAAAAATGCAAAGGAAAAAAATGCCCCTGTAATAATATACCTGCTGTTTTTTGATAACTTTTTCTCTACTTGTATTATCAAATGTCAACAAAATTGAAATGCTTCATCCAGCATCTTGTGCCCTGCTTTTTCACTGTTTCCTTCCATCATTAAATATTCTTTGAGAAAATCTT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_9408:HG2_PB_assemblyticsfalcon_26401:HG2_PB_assemblyticsPBcR_25589:HG2_PB_pbsv_9388:HG4_PB_pbsv_9409:HG4_10X_allpass_1811:HG2_10X_allpass_1557:HG4_Ill_MetaSV_5285:HG2_Ill_MetaSV_5049:HG2_Ill_tnscope_1065:HG4_PB_SVrefine2PBcRDovetail_4654:HG2_PB_SVrefine2PBcRplusDovetail_10961:HG2_PB_SVrefine2Falcon1plusDovetail_11761;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11761:HG2_PB_SVrefine2PBcRplusDovetail_10961:HG4_PB_SVrefine2PBcRDovetail_4654;NumExactMatchSVs=3;ClusterMaxShiftDist=0.114901;ClusterMaxSizeDiff=0.114901;ClusterMaxEditDist=0.114901;PBcalls=8;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-5155;DistBack=25616;DistForward=14573;DistMin=14573;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=288;REFWIDENED=8:40774406-40779848;PctSeqSimilarity=0.9314;PctSizeSimilarity=0.9998;PctRecOverlap=0.9577;SizeDiff=-1;StartDistance=-217;EndDistance=-218;GTMatch=0;TruScore=96;MatchId=3943.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:55:52:0|1:55:1:0:26:./.:0:0:0:0:0/0:73:1:0/1:363:182:5416:.:.
chr8	41279328	HG2_10X_SVrefine210Xhap12_6662	TAGATTAACCTTAAAAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAAGCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_9875:HG3_PB_pbsv_9151:HG2_PB_pbsv_9396:HG3_Ill_Krunchall_12651:HG4_PB_pbsv_9417:HG3_PB_HySA_14073:HG2_PB_HySA_16892:HG3_Ill_MetaSV_5226:HG2_Ill_tnscope_1066:HG2_Ill_MetaSV_5052:HG4_PB_SVrefine2Falcon1Dovetail_5703:HG4_Ill_scalpel_8742:HG4_Ill_manta_2291:HG4_Ill_SVrefine2DISCOVARDovetail_6695:HG4_Ill_GATKHCSBGrefine_6490:HG4_10X_allpass_1812:HG3_PB_SVrefine2PBcRDovetail_4222:HG3_Ill_scalpel_9073:HG3_Ill_manta_2176:HG3_Ill_SVrefine2DISCOVARDovetail_6895:HG3_Ill_GATKHCSBGrefine_6290:HG3_10X_allpass_1867:HG2_PB_SVrefine2PBcRplusDovetail_10965:HG2_PB_SVrefine2PB10Xhap12_6872:HG2_PB_SVrefine2Falcon1plusDovetail_11765:HG2_Ill_scalpel_8966:HG2_Ill_manta_2669:HG2_Ill_SVrefine2DISCOVARplusDovetail_12826:HG2_Ill_GATKHCSBGrefine_6375:HG2_10X_allpass_1558:HG2_10X_SVrefine210Xhap12_6662:HG2_Ill_breakscan11_1353;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6662:HG2_10X_allpass_1558:HG2_Ill_GATKHCSBGrefine_6375:HG2_Ill_SVrefine2DISCOVARplusDovetail_12826:HG2_Ill_manta_2669:HG2_Ill_scalpel_8966:HG2_PB_SVrefine2Falcon1plusDovetail_11765:HG2_PB_SVrefine2PB10Xhap12_6872:HG2_PB_SVrefine2PBcRplusDovetail_10965:HG3_10X_allpass_1867:HG3_Ill_GATKHCSBGrefine_6290:HG3_Ill_SVrefine2DISCOVARDovetail_6895:HG3_Ill_manta_2176:HG3_Ill_scalpel_9073:HG3_PB_SVrefine2PBcRDovetail_4222:HG4_10X_allpass_1812:HG4_Ill_GATKHCSBGrefine_6490:HG4_Ill_SVrefine2DISCOVARDovetail_6695:HG4_Ill_manta_2291:HG4_Ill_scalpel_8742:HG4_PB_SVrefine2Falcon1Dovetail_5703;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00617284;ClusterMaxSizeDiff=0.00617284;ClusterMaxEditDist=0.00619195;PBcalls=10;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-484;DistForward=-308;DistMin=-484;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=8:41279329-41279667;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3944.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:19:0:14:./.:0:0:0:0:1/1:0:40:./.:2:13:.:.:.
chr8	41483869	HG2_PB_SVrefine2PBcRplusDovetail_10966	CACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCCCA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_9418:HG2_PB_assemblyticsPBcR_25601:HG2_PB_assemblyticsfalcon_26416:HG2_PB_SVrefine2Falcon1plusDovetail_11766:HG4_Ill_svaba_11882:HG4_Ill_GATKHCSBGrefine_6491:HG2_PB_SVrefine2PBcRplusDovetail_10966:HG2_PB_SVrefine2PB10Xhap12_6873:HG2_Ill_svaba_11784:HG2_Ill_GATKHC_15146:HG2_Ill_GATKHCSBGrefine_6376:HG2_10X_SVrefine210Xhap12_6663:HG2_PB_pbsv_9397;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6663:HG2_Ill_GATKHCSBGrefine_6376:HG2_Ill_GATKHC_15146:HG2_Ill_svaba_11784:HG2_PB_SVrefine2PB10Xhap12_6873:HG2_PB_SVrefine2PBcRplusDovetail_10966:HG4_Ill_GATKHCSBGrefine_6491:HG4_Ill_svaba_11882;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.0878049;PBcalls=7;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-104;DistBack=26294;DistForward=4412;DistMin=4412;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=89;REFWIDENED=8:41483821-41484013;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3945.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:18:./.:6:2:11:11:./.:0:0:0:0:0/1:24:17:./.:.:.:.:.:.
chr8	41494640	HG2_PB_SVrefine2Falcon1plusDovetail_11767	AGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6664:HG2_PB_pbsv_9398:HG2_PB_HySA_16895:HG4_PB_SVrefine2PBcRDovetail_4658:HG4_PB_pbsv_9419:HG3_PB_pbsv_9152:HG3_PB_HySA_14076:HG4_PB_HySA_13637:HG4_Ill_manta_2292:HG4_Ill_GATKHCSBGrefine_6492:HG4_Ill_250bpfermikitraw_12611:HG3_Ill_GATKHCSBGrefine_6293:HG3_Ill_250bpfermikitraw_12304:HG2_Ill_manta_2670:HG2_Ill_GATKHCSBGrefine_6377:HG2_Ill_250bpfermikitraw_12662:HG4_PB_SVrefine2Falcon1Dovetail_5704:HG4_Ill_SVrefine2DISCOVARDovetail_6696:HG3_PB_SVrefine2PBcRDovetail_4223:HG3_Ill_SVrefine2DISCOVARDovetail_6898:HG2_PB_SVrefine2PBcRplusDovetail_10967:HG2_PB_SVrefine2PB10Xhap12_6874:HG2_PB_SVrefine2Falcon1plusDovetail_11767:HG2_Ill_SVrefine2DISCOVARplusDovetail_12828;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6664:HG4_PB_SVrefine2Falcon1Dovetail_5704:HG4_Ill_SVrefine2DISCOVARDovetail_6696:HG3_PB_SVrefine2PBcRDovetail_4223:HG3_Ill_SVrefine2DISCOVARDovetail_6898:HG2_PB_SVrefine2PBcRplusDovetail_10967:HG2_PB_SVrefine2PB10Xhap12_6874:HG2_PB_SVrefine2Falcon1plusDovetail_11767:HG2_Ill_SVrefine2DISCOVARplusDovetail_12828;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0335196;ClusterMaxSizeDiff=0.0335196;ClusterMaxEditDist=0.0338983;PBcalls=12;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-89;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=97;REFWIDENED=8:41494641-41494826;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9111;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=96;MatchId=3946.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:27:1:15:./.:0:0:0:0:./.:4:28:./.:.:.:.:.:.
chr8	42572230	HG2_PB_SVrefine2Falcon1plusDovetail_11774	AGACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6671:HG2_10X_allpass_1560:HG2_PB_assemblyticsPBcR_25616:HG3_Ill_Krunchall_12663:HG2_PB_pbsv_9407:HG2_Ill_Krunchall_12989:HG2_PB_HySA_16906:HG2_Ill_MetaSV_5057:HG3_PB_SVrefine2PBcRDovetail_4229:HG3_Ill_manta_2179:HG2_PB_assemblyticsfalcon_26427:HG2_PB_SVrefine2PBcRplusDovetail_10974:HG2_PB_SVrefine2Falcon1plusDovetail_11774:HG2_Ill_manta_2672:HG2_Ill_GATKHCSBGrefine_6385:HG2_Ill_breakscan11_1354:HG3_PB_pbsv_9159;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6385:HG2_Ill_manta_2672:HG2_PB_SVrefine2Falcon1plusDovetail_11774:HG2_PB_SVrefine2PBcRplusDovetail_10974:HG2_PB_assemblyticsfalcon_26427:HG3_Ill_manta_2179:HG3_PB_SVrefine2PBcRDovetail_4229;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0250784;ClusterMaxSizeDiff=0.0250784;ClusterMaxEditDist=0.0250784;PBcalls=8;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-321;DistBack=-271;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=8:42572217-42572554;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3947.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:0|1:34:0:1:33:./.:0:0:0:0:0/1:28:12:0/1:23:11:.:.:.
chr8	42585893	HG3_Ill_MetaSV_5232	TTAAAAAGTGAAAAAAAGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAATAAATAAATAAATAAATAAATAAATAAATAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1069:HG3_Ill_GATKHCSBGrefine_6301:HG2_Ill_GATKHCSBGrefine_6388:HG3_Ill_manta_2180:HG2_Ill_manta_2673:HG2_10X_SVrefine210Xhap12_6672:HG3_Ill_MetaSV_5233:HG3_Ill_Spiral_9884:HG2_Ill_Spiral_657:HG2_PB_assemblyticsfalcon_26430:HG4_PB_assemblyticsfalcon_25851:HG4_PB_SVrefine2Falcon1Dovetail_5711:HG3_PB_assemblyticsfalcon_26306:HG3_PB_SVrefine2Falcon1Dovetail_5670:HG3_Ill_Krunchall_12665:HG2_PB_pbsv_9409:HG2_Ill_Krunchall_12992:HG3_PB_HySA_14087:HG3_PB_pbsv_9161:HG3_PB_SVrefine2PBcRDovetail_4230:HG3_Ill_MetaSV_5232:HG3_10X_allpass_1871:HG2_PB_SVrefine2Falcon1plusDovetail_11775:HG2_Ill_MetaSV_5058:HG2_10X_allpass_1561;NumClusterSVs=25;ExactMatchIDs=HG2_10X_allpass_1561:HG2_Ill_MetaSV_5058:HG2_PB_SVrefine2Falcon1plusDovetail_11775:HG3_10X_allpass_1871:HG3_Ill_MetaSV_5232:HG3_PB_SVrefine2PBcRDovetail_4230;NumExactMatchSVs=6;ClusterMaxShiftDist=0.10119;ClusterMaxSizeDiff=0.10119;ClusterMaxEditDist=0.10119;PBcalls=10;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=12;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-345;DistBack=7644;DistForward=-329;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=8:42585894-42586256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3948.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:23:0|1:32:0:0:21:./.:0:0:0:0:0/1:51:29:0/1:27:11:.:.:.
chr8	47880230	HG2_PB_SVrefine2Falcon1plusDovetail_11788	TGAGAGCTGATTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAATGCAGTGGCGGGATCTCGGCTCACTGCAAG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6682:HG2_PB_assemblyticsfalcon_26439:HG2_PB_assemblyticsPBcR_25634:HG2_PB_pbsv_9415:HG4_PB_assemblyticsfalcon_25870:HG3_PB_assemblyticsfalcon_26320:HG4_Ill_Krunchall_13263:HG3_Ill_Krunchall_12674:HG3_PB_pbsv_9170:HG3_PB_HySA_14095:HG2_PB_HySA_16920:HG4_PB_HySA_13661:HG4_PB_pbsv_9436:HG4_PB_SVrefine2PBcRDovetail_4692:HG4_PB_SVrefine2Falcon1Dovetail_5754:HG4_Ill_svaba_11900:HG4_Ill_scalpel_8758:HG4_Ill_manta_2298:HG4_Ill_SVrefine2DISCOVARDovetail_6714:HG4_Ill_MetaSV_5297:HG4_Ill_GATKHCSBGrefine_6506:HG4_Ill_250bpfermikitraw_12633:HG4_Ill_150bpfermikitraw_12103:HG4_CG_vcfBeta_6021:HG4_10X_allpass_1817:HG3_PB_SVrefine2PBcRDovetail_4262:HG3_PB_SVrefine2Falcon1Dovetail_5706:HG3_Ill_svaba_11910:HG3_Ill_scalpel_9090:HG3_Ill_SVrefine2DISCOVARDovetail_6914:HG3_Ill_MetaSV_5238:HG3_Ill_GATKHCSBGrefine_6306:HG3_Ill_150bpfermikitraw_11965:HG2_PB_SVrefine2PBcRplusDovetail_10993:HG2_PB_SVrefine2Falcon1plusDovetail_11788:HG2_Ill_svaba_11797:HG2_Ill_scalpel_8983:HG2_Ill_manta_2675:HG2_Ill_breakscan11_1357:HG2_Ill_SpiralSDKrefine_16892:HG2_Ill_SVrefine2DISCOVARplusDovetail_12848:HG2_Ill_MetaSV_5062:HG2_Ill_GATKHCSBGrefine_6391:HG2_Ill_250bpfermikitraw_12678:HG2_Ill_150bpfermikitraw_11922:HG2_CG_vcfBeta_5342:HG2_10X_allpass_1565;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6682:HG4_PB_pbsv_9436:HG4_PB_SVrefine2PBcRDovetail_4692:HG4_PB_SVrefine2Falcon1Dovetail_5754:HG4_Ill_svaba_11900:HG4_Ill_scalpel_8758:HG4_Ill_manta_2298:HG4_Ill_SVrefine2DISCOVARDovetail_6714:HG4_Ill_MetaSV_5297:HG4_Ill_GATKHCSBGrefine_6506:HG4_Ill_250bpfermikitraw_12633:HG4_Ill_150bpfermikitraw_12103:HG4_CG_vcfBeta_6021:HG4_10X_allpass_1817:HG3_PB_SVrefine2PBcRDovetail_4262:HG3_PB_SVrefine2Falcon1Dovetail_5706:HG3_Ill_svaba_11910:HG3_Ill_scalpel_9090:HG3_Ill_SVrefine2DISCOVARDovetail_6914:HG3_Ill_MetaSV_5238:HG3_Ill_GATKHCSBGrefine_6306:HG3_Ill_150bpfermikitraw_11965:HG2_PB_SVrefine2PBcRplusDovetail_10993:HG2_PB_SVrefine2Falcon1plusDovetail_11788:HG2_Ill_svaba_11797:HG2_Ill_scalpel_8983:HG2_Ill_manta_2675:HG2_Ill_breakscan11_1357:HG2_Ill_SpiralSDKrefine_16892:HG2_Ill_SVrefine2DISCOVARplusDovetail_12848:HG2_Ill_MetaSV_5062:HG2_Ill_GATKHCSBGrefine_6391:HG2_Ill_250bpfermikitraw_12678:HG2_Ill_150bpfermikitraw_11922:HG2_CG_vcfBeta_5342:HG2_10X_allpass_1565;NumExactMatchSVs=36;ClusterMaxShiftDist=0.198276;ClusterMaxSizeDiff=0.198276;ClusterMaxEditDist=0.198276;PBcalls=16;Illcalls=26;TenXcalls=3;CGcalls=2;PBexactcalls=7;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=2;HG2count=19;HG3count=12;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-121;DistBack=68283;DistForward=20249;DistMin=20249;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=8:47880231-47880363;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3949.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:71:1/1:1:29:2:32:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr8	50330097	HG4_Ill_250bpfermikitraw_12641	CATATATATTTACTATAAATATATACTATAAATATATATACTATATACACATAAAT	C	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_26337:HG2_PB_pbsv_9420:HG2_PB_assemblyticsfalcon_26448:HG4_PB_pbsv_9442:HG3_PB_HySA_14107:HG3_PB_pbsv_9178:HG4_PB_HySA_13669:HG4_Ill_GATKHCSBGrefine_6513:HG4_Ill_250bpfermikitraw_12641:HG4_Ill_150bpfermikitraw_12113:HG3_Ill_svaba_11920:HG3_Ill_GATKHCSBGrefine_6311:HG3_Ill_250bpfermikitraw_12331:HG3_Ill_150bpfermikitraw_11970:HG2_PB_HySA_16931:HG2_Ill_SpiralSDKrefine_16897:HG2_Ill_250bpfermikitraw_12688:HG2_Ill_150bpfermikitraw_11934:HG4_PB_assemblyticsfalcon_25884;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11934:HG2_Ill_250bpfermikitraw_12688:HG2_Ill_SpiralSDKrefine_16897:HG2_PB_HySA_16931:HG3_Ill_150bpfermikitraw_11970:HG3_Ill_250bpfermikitraw_12331:HG3_Ill_GATKHCSBGrefine_6311:HG3_Ill_svaba_11920:HG4_Ill_150bpfermikitraw_12113:HG4_Ill_250bpfermikitraw_12641:HG4_Ill_GATKHCSBGrefine_6513:HG4_PB_HySA_13669;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0530973;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.0689655;PBcalls=9;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=-101;DistForward=71334;DistMin=-101;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=101;REFWIDENED=8:50330096-50330254;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3950.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:56:1/1:0:6:0:11:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr8	51374713	HG3_Ill_GATKHCSBGrefine_6312	AAAAAATAAAAAGATAAAAAAGAGAATATCACACTAAAGTGAGTCTTGTAAATTTTGGTTTATGAAAATATCTATATGGAAGTACATATACAAGTTATATTTAAAATATACTATAGTCTATTATGCATGCAATAGGATTATTTCTTAAAAATGTACATAACTTAATTAAAAATATTTAATTGCTAAAGACACTAACAATTATCTTAGCTCTCAGTGAGTCATAATCTTTTTGCTGGGATAGAGTTTGCCTCAATGTTGATGACTACTGACTGATTAGAGTAGTGGTTACTGAAGGTTGGGGTGGCTGGGGCAATTTCTT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_9182:HG2_PB_assemblyticsfalcon_26459:HG2_PB_HySA_16944:HG4_Ill_MetaSV_5304:HG4_PB_assemblyticsfalcon_25892:HG2_PB_assemblyticsPBcR_25656:HG4_Ill_Krunchall_13280:HG3_Ill_Krunchall_12690:HG2_Ill_Krunchall_13015:HG4_PB_SVrefine2PBcRDovetail_4698:HG4_PB_SVrefine2Falcon1Dovetail_5761:HG4_PB_HySA_13679:HG4_Ill_manta_2300:HG4_Ill_GATKHCSBGrefine_6514:HG4_10X_allpass_1821:HG3_PB_SVrefine2PBcRDovetail_4264:HG3_Ill_manta_2187:HG3_Ill_GATKHCSBGrefine_6312:HG3_10X_allpass_1876:HG2_PB_SVrefine2PBcRplusDovetail_10999:HG2_PB_SVrefine2PB10Xhap12_6884:HG2_PB_SVrefine2Falcon1plusDovetail_11793:HG2_Ill_manta_2679:HG2_Ill_breakscan11_1359:HG2_Ill_GATKHCSBGrefine_6394:HG2_10X_allpass_1567:HG2_10X_SVrefine210Xhap12_6689:HG4_Ill_MetaSV_5303:HG3_Ill_Spiral_9906:HG4_PB_pbsv_9445:HG2_PB_pbsv_9423;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6689:HG2_10X_allpass_1567:HG2_Ill_GATKHCSBGrefine_6394:HG2_Ill_breakscan11_1359:HG2_Ill_manta_2679:HG2_PB_SVrefine2Falcon1plusDovetail_11793:HG2_PB_SVrefine2PB10Xhap12_6884:HG2_PB_SVrefine2PBcRplusDovetail_10999:HG3_10X_allpass_1876:HG3_Ill_GATKHCSBGrefine_6312:HG3_Ill_manta_2187:HG3_PB_SVrefine2PBcRDovetail_4264:HG4_10X_allpass_1821:HG4_Ill_GATKHCSBGrefine_6514:HG4_Ill_manta_2300:HG4_PB_HySA_13679:HG4_PB_SVrefine2Falcon1Dovetail_5761:HG4_PB_SVrefine2PBcRDovetail_4698;NumExactMatchSVs=18;ClusterMaxShiftDist=0.147929;ClusterMaxSizeDiff=0.147929;ClusterMaxEditDist=0.147929;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-367;DistForward=8432;DistMin=-367;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=8:51374714-51375035;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3951.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:34:1|0:7:29:17:1:./.:0:0:0:0:0/1:43:10:0/1:42:12:.:.:.
chr8	52023761	HG2_PB_assemblyticsPBcR_25662	CACCAGAAGAGAGAGGAGCAAAAAACAAAAATAAAAGCAAAGCAAAACAAAACAAAAAAGTGCCATTCACCATTGTGTCAAATCAATGTGCAGGGAAGCACTCGATAGTTTTACAGGATGATTTTTCCTGCAGCTGATTAGAGTGTTGCCTCAAGCTAGTGATTCTATGCACATACAATGGGCTTTTCAATAAAGTACTCATGATGACAGAATGGAGCCTATTATTGGTTCAAAATTATAGACTCCATCTAACTAAGGTGAATCTAAATACTGCT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_9428:HG3_Ill_Cortex_3664:HG2_Ill_Cortex_8858:HG2_PB_SVrefine2PB10Xhap12_6888:HG3_Ill_Krunchall_12700:HG2_Ill_Krunchall_13024:HG3_Ill_Krunchall_12699:HG3_Ill_MetaSV_5247:HG2_Ill_MetaSV_5067:HG4_PB_assemblyticsfalcon_25899:HG4_PB_SVrefine2Falcon1Dovetail_5765:HG3_PB_pbsv_9187:HG3_PB_assemblyticsfalcon_26352:HG3_PB_SVrefine2Falcon1Dovetail_5717:HG3_Ill_scalpel_9110:HG3_Ill_manta_2188:HG3_Ill_GATKHCSBGrefine_6316:HG3_10X_allpass_1877:HG2_PB_assemblyticsfalcon_26469:HG2_PB_assemblyticsPBcR_25662:HG2_PB_SVrefine2PBcRplusDovetail_11003:HG2_PB_SVrefine2PB10Xhap12_6887:HG2_PB_SVrefine2Falcon1plusDovetail_11796:HG2_Ill_manta_2681:HG2_Ill_SpiralSDKrefine_16908:HG2_Ill_GATKHCSBGrefine_6397:HG2_10X_allpass_1568:HG2_10X_SVrefine210Xhap12_6692:HG2_PB_PB10Xdip_30091:HG2_PB_PB10Xdip_30092;NumClusterSVs=30;ExactMatchIDs=HG2_PB_PB10Xdip_30091:HG2_10X_SVrefine210Xhap12_6692:HG2_10X_allpass_1568:HG2_Ill_GATKHCSBGrefine_6397:HG2_Ill_SpiralSDKrefine_16908:HG2_Ill_manta_2681:HG2_PB_SVrefine2Falcon1plusDovetail_11796:HG2_PB_SVrefine2PB10Xhap12_6887:HG2_PB_SVrefine2PBcRplusDovetail_11003:HG2_PB_assemblyticsPBcR_25662:HG2_PB_assemblyticsfalcon_26469:HG3_10X_allpass_1877:HG3_Ill_GATKHCSBGrefine_6316:HG3_Ill_manta_2188:HG3_Ill_scalpel_9110:HG3_PB_SVrefine2Falcon1Dovetail_5717:HG3_PB_assemblyticsfalcon_26352:HG3_PB_pbsv_9187:HG4_PB_SVrefine2Falcon1Dovetail_5765:HG4_PB_assemblyticsfalcon_25899;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0685921;ClusterMaxSizeDiff=0.0685921;ClusterMaxEditDist=0.0723327;PBcalls=14;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-274;DistBack=10530;DistForward=36959;DistMin=10530;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=8:52023762-52024037;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3952.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:32:0|1:41:0:2:42:./.:0:0:0:0:0/1:51:17:./.:.:.:.:.:.
chr8	52367502	HG3_Ill_SVrefine2DISCOVARDovetail_6934	CAAGAGGTAAGGGAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1361:HG3_Ill_Krunchall_12708:HG2_Ill_Krunchall_13030:HG3_Ill_Spiral_9918:HG2_PB_HySA_16954:HG3_PB_pbsv_9189:HG3_PB_SVrefine2Falcon1Dovetail_5719:HG3_Ill_svaba_11944:HG3_Ill_scalpel_9115:HG3_Ill_manta_2190:HG3_Ill_SVrefine2DISCOVARDovetail_6934:HG3_Ill_MetaSV_5248:HG3_Ill_GATKHCSBGrefine_6318:HG3_10X_allpass_1878:HG2_PB_pbsv_9430:HG2_PB_SVrefine2PBcRplusDovetail_11004:HG2_PB_SVrefine2PB10Xhap12_6889:HG2_PB_SVrefine2Falcon1plusDovetail_11797:HG2_Ill_svaba_11828:HG2_Ill_scalpel_9007:HG2_Ill_manta_2683:HG2_Ill_SpiralSDKrefine_16913:HG2_Ill_SVrefine2DISCOVARplusDovetail_12867:HG2_Ill_MetaSV_5068:HG2_Ill_GATKHCSBGrefine_6399:HG2_10X_allpass_1570:HG2_10X_SVrefine210Xhap12_6694;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6694:HG2_10X_allpass_1570:HG2_Ill_GATKHCSBGrefine_6399:HG2_Ill_MetaSV_5068:HG2_Ill_SVrefine2DISCOVARplusDovetail_12867:HG2_Ill_SpiralSDKrefine_16913:HG2_Ill_manta_2683:HG2_Ill_scalpel_9007:HG2_Ill_svaba_11828:HG2_PB_SVrefine2Falcon1plusDovetail_11797:HG2_PB_SVrefine2PB10Xhap12_6889:HG2_PB_SVrefine2PBcRplusDovetail_11004:HG2_PB_pbsv_9430:HG3_10X_allpass_1878:HG3_Ill_GATKHCSBGrefine_6318:HG3_Ill_MetaSV_5248:HG3_Ill_SVrefine2DISCOVARDovetail_6934:HG3_Ill_manta_2190:HG3_Ill_scalpel_9115:HG3_Ill_svaba_11944:HG3_PB_SVrefine2Falcon1Dovetail_5719;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0105263;ClusterMaxSizeDiff=0.0105263;ClusterMaxEditDist=0.010582;PBcalls=7;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-189;DistBack=2002;DistForward=-177;DistMin=-177;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:52367503-52367706;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3953.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:39:0|1:25:1:1:38:./.:0:0:0:0:0/1:22:18:./.:.:.:.:.:.
chr8	52737961	HG2_Ill_manta_2685	TAAGATATTTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6698:HG2_PB_pbsv_9433:HG4_Ill_Krunchall_13298:HG3_PB_pbsv_9192:HG3_Ill_Krunchall_12713:HG2_Ill_Krunchall_13033:HG4_PB_assemblyticsfalcon_25909:HG3_PB_assemblyticsfalcon_26361:HG2_PB_assemblyticsPBcR_25669:HG2_PB_assemblyticsfalcon_26475:HG4_PB_HySA_13690:HG3_PB_HySA_14130:HG4_PB_HySA_13689:HG2_PB_HySA_16958:HG4_Ill_MetaSV_5308:HG3_Ill_MetaSV_5250:HG2_PB_HySA_16957:HG4_Ill_svaba_11929:HG4_Ill_scalpel_8776:HG4_Ill_manta_2305:HG4_Ill_GATKHCSBGrefine_6520:HG4_10X_allpass_1825:HG3_Ill_svaba_11948:HG3_Ill_scalpel_9118:HG3_Ill_manta_2192:HG3_Ill_GATKHCSBGrefine_6319:HG3_10X_allpass_1879:HG2_Ill_svaba_11831:HG2_Ill_scalpel_9009:HG2_Ill_manta_2685:HG2_Ill_GATKHCSBGrefine_6400:HG2_10X_allpass_1571:HG2_Ill_tnscope_1072:HG4_PB_pbsv_9454:HG4_PB_SVrefine2PBcRDovetail_4704:HG4_PB_SVrefine2Falcon1Dovetail_5769:HG4_Ill_SVrefine2DISCOVARDovetail_6736:HG3_PB_SVrefine2PBcRDovetail_4273:HG3_PB_SVrefine2Falcon1Dovetail_5723:HG3_Ill_SVrefine2DISCOVARDovetail_6938:HG2_PB_SVrefine2PBcRplusDovetail_11008:HG2_PB_SVrefine2PB10Xhap12_6893:HG2_PB_SVrefine2Falcon1plusDovetail_11801:HG2_Ill_SVrefine2DISCOVARplusDovetail_12872;NumClusterSVs=44;ExactMatchIDs=HG2_10X_allpass_1571:HG2_Ill_GATKHCSBGrefine_6400:HG2_Ill_manta_2685:HG2_Ill_scalpel_9009:HG2_Ill_svaba_11831:HG3_10X_allpass_1879:HG3_Ill_GATKHCSBGrefine_6319:HG3_Ill_manta_2192:HG3_Ill_scalpel_9118:HG3_Ill_svaba_11948:HG4_10X_allpass_1825:HG4_Ill_GATKHCSBGrefine_6520:HG4_Ill_manta_2305:HG4_Ill_scalpel_8776:HG4_Ill_svaba_11929;NumExactMatchSVs=15;ClusterMaxShiftDist=0.104265;ClusterMaxSizeDiff=0.104265;ClusterMaxEditDist=0.104265;PBcalls=19;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=2;SVLEN=-323;DistBack=-343;DistForward=-312;DistMin=-343;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=8:52737957-52738296;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3954.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:31:0:18:./.:0:0:0:0:1/1:0:46:./.:1:4:.:.:.
chr8	53700963	HG2_Ill_SVrefine2DISCOVARplusDovetail_12878	GCCGAAAGTGTCAAGCAGTGCAGGCTTTATTCTAAGGCCAAGGAATTGGAGAAGTGGGACCGTAGCTTGCAAATCAATTTCTCAGTTTCTGAGAACCAGGAAATTACAAATTCAGGGTATCTTCACTGAAGGGGTTGGGCATTAAGAGCAAGGGGAGGAACATTCATGGTTTTTTTGGGAAGCAATGAAGATTTTCCTAGAACAGGGAGCTGCCTTTTTTGTCCTTTCTTGGTCTTTTCTGGTTATTGTCATAGTGATTGTCAGCTGTCATGGTGCTGGTGGGAGTGTCACTTAGCATAGAAATTGGATTATAATGAAGCTAGAGGTTCTTCAGAGGTCAAGTAGGCGGCCATACTGGGTTTCACCAGTTTCAGCCAGTTTAGTTCTAAGAAGGAACTAATGACCACAGGCATCCTGCTTCCTAAAAATAAGCAGAGTTAAAGCCCAGTAGGAATTTAGCTATGTCATGTAGGCATTACATTGGGCAACAAAAGCAGAGAGGGGGCCCAGCTAAGCCACCTAGGCACTACAATGGGTGACAATTTTATAGTATTATAGAAAAGATTCTCTGTCTGATTTCTTCCACGTTTACAGAACTCCAGATTTACTTTCAGGAGTCAAAGCACCGGGGAAAGATTCAACTTCCTTCAGAGATTTTGGAAA	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_13039:HG3_Ill_GATKHCSBGrefine_6323:HG2_Ill_GATKHCSBGrefine_6405:HG2_Ill_SpiralSDKrefine_16922:HG2_10X_allpass_1572:HG2_PB_assemblyticsfalcon_26482:HG2_PB_SVrefine2Falcon1plusDovetail_11803:HG2_Ill_tnscope_1073:HG3_10X_allpass_1881:HG3_Ill_manta_2195:HG2_Ill_manta_2688:HG3_PB_pbsv_9195:HG3_Ill_Spiral_9928:HG2_Ill_Spiral_658:HG2_PB_HySA_16965:HG2_PB_pbsv_9436:HG3_Ill_MetaSV_5253:HG2_Ill_MetaSV_5072:HG2_PB_SVrefine2PB10Xhap12_6895:HG2_PB_PB10Xdip_30153:HG4_PB_assemblyticsfalcon_25916:HG3_PB_assemblyticsfalcon_26368:HG4_PB_SVrefine2Falcon1Dovetail_5772:HG3_PB_SVrefine2Falcon1Dovetail_5726:HG2_Ill_SVrefine2DISCOVARplusDovetail_12878:HG2_10X_SVrefine210Xhap12_6701;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6701:HG2_Ill_SVrefine2DISCOVARplusDovetail_12878:HG3_PB_SVrefine2Falcon1Dovetail_5726:HG4_PB_SVrefine2Falcon1Dovetail_5772;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0287226;ClusterMaxSizeDiff=0.0287226;ClusterMaxEditDist=0.0287226;PBcalls=11;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-662;DistBack=-673;DistForward=-663;DistMin=-673;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:53700964-53701626;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3956.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:23:1|0:1:20:31:1:./.:0:0:0:0:0/1:51:15:0/1:53:12:.:.:.
chr8	54122551	HG3_Ill_MetaSV_5254	ATTTTTCTATATGTAATTATCTGGATCTATATTAAGACAAACATGAGGTCATACTGATGTCTCCAATTCTAATCTATTACTACATGGATGATTCTAGTTCCCCTTGCTTGTCTGCAAATTCCTGTGCAACTAGGAAACCTGGCCCGTACATCTGCCATCCATTAACCTAATTGCTCAATTCCAATATACATGTGTCATAATAGCATGTATCCATCATTACAGTAACAAATAAATTATTTCGCTGCCCTAAAAAATCCCTTGTGCGTCACCTATAATCTTCTCTCTCTCTCCTTGAACCTCTCATTACCATTGATCTCTTTAGTTTCACTCTAGTTTTGCCTTTTCCAGAATGTCATAAAATTTAAATCATACAGGATGCAGTCTTTTAAGAGTGGCTTCTGAAAGTGAGACTTGGAAATATGCATTTTGGTATCATCCATGTCATTTCGTGGTTTGGTAGCTCTTTTTAAAAATCACTGACTAGTATTCCTTTATATGGATATGCTGCAGTTTATCCATTCACCTATTAAAAGATATCTTGGTTGATCTAGTTTTTATCAAGTATGAATAAATCTGCTATTATGAATAAATATGCTATCAACATTCATGTGTGGGTTTTTAGATGAACCTAAGTTTTAAATACAGTTGGGTAAATACCTGGGAGTTCAATTGCCACATTGCATGGTAATCCAACTGTTTAGTTTTGTAAGGGAAAAGAGGGTTAATTTTTAAAATTACCCCCAGTACCAATGTTTTATGATCCTACCAAAATATAGGATTTATATCCATTCTATATCAATGGTTAATAATGATAAAATGCAAAACATGAATGGGAGGGAACATGAAAATGATGATATACTAGCACTATTTTTCCCCAGAGTATTCTTTTCAGTGAATTAATACTTTATCTCAACCAGCTCATTTGGGATTAACAATAAATTCACATAGGGAAATAGGTGCTGATCTCTGTGACTGCCACCTTAGACATCTTGAAACCTATCATTGTCTTTCAGGCTAACAGTCATTAAGAAGTAATTCTCTTTTTTAGGGTTTCAGGGAGTATTCACTGGCCTATCTCTGGCAATCAGTGAGATGTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6703:HG3_PB_pbsv_9199:HG3_Ill_Krunchall_12722:HG2_PB_pbsv_9438:HG2_Ill_Krunchall_13043:HG4_PB_assemblyticsfalcon_25921:HG3_PB_assemblyticsfalcon_26375:HG2_10X_allpass_1573:HG2_Ill_tnscope_1074:HG4_PB_SVrefine2Falcon1Dovetail_5773:HG3_PB_SVrefine2PBcRDovetail_4279:HG3_PB_SVrefine2Falcon1Dovetail_5729:HG3_Ill_SVrefine2DISCOVARDovetail_6947:HG3_Ill_MetaSV_5254:HG3_Ill_GATKHCSBGrefine_6326:HG3_10X_allpass_1882:HG2_PB_SVrefine2PB10Xhap12_6897:HG2_Ill_breakscan11_1362:HG2_Ill_SpiralSDKrefine_16924:HG2_Ill_MetaSV_5073:HG2_Ill_GATKHCSBGrefine_6408;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6703:HG4_PB_SVrefine2Falcon1Dovetail_5773:HG3_PB_SVrefine2PBcRDovetail_4279:HG3_PB_SVrefine2Falcon1Dovetail_5729:HG3_Ill_SVrefine2DISCOVARDovetail_6947:HG3_Ill_MetaSV_5254:HG3_Ill_GATKHCSBGrefine_6326:HG3_10X_allpass_1882:HG2_PB_SVrefine2PB10Xhap12_6897:HG2_Ill_breakscan11_1362:HG2_Ill_SpiralSDKrefine_16924:HG2_Ill_MetaSV_5073:HG2_Ill_GATKHCSBGrefine_6408;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00547945;ClusterMaxSizeDiff=0.00547945;ClusterMaxEditDist=0.00547945;PBcalls=8;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1096;DistBack=11388;DistForward=-1094;DistMin=-1094;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=8:54122552-54123649;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3957.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:53:17:0|1:42:0:1:20:./.:0:0:0:0:0/1:71:23:0/1:71:40:1699:.:.
chr8	54204882	HG2_PB_SVrefine2Falcon1plusDovetail_11806	TAGAAAAGCAAAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAGAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1363:HG3_Ill_Krunchall_12724:HG2_Ill_Krunchall_13045:HG3_10X_allpass_1883:HG2_PB_assemblyticsPBcR_25682:HG2_PB_pbsv_9440:HG4_PB_assemblyticsfalcon_25925:HG4_PB_SVrefine2Falcon1Dovetail_5775:HG3_PB_HySA_14141:HG2_Ill_tnscope_1075:HG3_PB_pbsv_9201:HG3_PB_assemblyticsfalcon_26379:HG3_PB_SVrefine2PBcRDovetail_4281:HG3_PB_SVrefine2Falcon1Dovetail_5731:HG3_Ill_scalpel_9124:HG3_Ill_manta_2196:HG3_Ill_SVrefine2DISCOVARDovetail_6950:HG3_Ill_GATKHCSBGrefine_6328:HG2_PB_assemblyticsfalcon_26491:HG2_PB_SVrefine2PBcRplusDovetail_11012:HG2_PB_SVrefine2PB10Xhap12_6899:HG2_PB_SVrefine2Falcon1plusDovetail_11806:HG2_Ill_manta_2689:HG2_Ill_SVrefine2DISCOVARplusDovetail_12881:HG2_Ill_GATKHCSBGrefine_6410:HG2_10X_allpass_1574:HG2_10X_SVrefine210Xhap12_6705;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6705:HG2_10X_allpass_1574:HG2_Ill_GATKHCSBGrefine_6410:HG2_Ill_SVrefine2DISCOVARplusDovetail_12881:HG2_Ill_manta_2689:HG2_PB_SVrefine2Falcon1plusDovetail_11806:HG2_PB_SVrefine2PB10Xhap12_6899:HG2_PB_SVrefine2PBcRplusDovetail_11012:HG2_PB_assemblyticsfalcon_26491:HG3_Ill_GATKHCSBGrefine_6328:HG3_Ill_SVrefine2DISCOVARDovetail_6950:HG3_Ill_manta_2196:HG3_Ill_scalpel_9124:HG3_PB_SVrefine2Falcon1Dovetail_5731:HG3_PB_SVrefine2PBcRDovetail_4281:HG3_PB_assemblyticsfalcon_26379:HG3_PB_pbsv_9201;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.0869565;PBcalls=13;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=-411;DistForward=-130;DistMin=-411;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:54204883-54205212;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3958.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:29:0|1:21:2:2:29:./.:0:0:0:0:0/1:34:20:0/1:27:4:.:.:.
chr8	56401202	HG4_Ill_GATKHCSBGrefine_6534	TAAAAAGACCAATGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTTTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_9470:HG4_Ill_Krunchall_13323:HG2_PB_pbsv_9453:HG2_PB_assemblyticsfalcon_26508:HG3_PB_assemblyticsfalcon_26395:HG4_PB_assemblyticsfalcon_25940:HG2_PB_assemblyticsPBcR_25700:HG3_PB_pbsv_9210:HG4_Ill_MetaSV_5315:HG3_Ill_MetaSV_5259:HG2_Ill_tnscope_1076:HG4_PB_SVrefine2Falcon1Dovetail_5781:HG4_Ill_manta_2308:HG4_Ill_GATKHCSBGrefine_6534:HG4_10X_allpass_1827:HG3_PB_SVrefine2PBcRDovetail_4287:HG3_PB_SVrefine2Falcon1Dovetail_5740:HG3_Ill_scalpel_9133:HG3_Ill_manta_2199:HG3_Ill_SVrefine2DISCOVARDovetail_6963:HG3_Ill_GATKHCSBGrefine_6333:HG3_10X_allpass_1884:HG2_PB_SVrefine2PBcRplusDovetail_11019:HG2_PB_SVrefine2PB10Xhap12_6907:HG2_PB_SVrefine2Falcon1plusDovetail_11813:HG2_PB_HySA_16988:HG2_Ill_manta_2692:HG2_Ill_MetaSV_5079:HG2_Ill_GATKHCSBGrefine_6424:HG2_10X_allpass_1575:HG2_10X_SVrefine210Xhap12_6712:HG2_Ill_breakscan11_1364:HG3_PB_HySA_14155;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6712:HG2_10X_allpass_1575:HG2_Ill_GATKHCSBGrefine_6424:HG2_Ill_MetaSV_5079:HG2_Ill_manta_2692:HG2_PB_HySA_16988:HG2_PB_SVrefine2Falcon1plusDovetail_11813:HG2_PB_SVrefine2PB10Xhap12_6907:HG2_PB_SVrefine2PBcRplusDovetail_11019:HG3_10X_allpass_1884:HG3_Ill_GATKHCSBGrefine_6333:HG3_Ill_SVrefine2DISCOVARDovetail_6963:HG3_Ill_manta_2199:HG3_Ill_scalpel_9133:HG3_PB_SVrefine2Falcon1Dovetail_5740:HG3_PB_SVrefine2PBcRDovetail_4287:HG4_10X_allpass_1827:HG4_Ill_GATKHCSBGrefine_6534:HG4_Ill_manta_2308:HG4_PB_SVrefine2Falcon1Dovetail_5781;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0933977;ClusterMaxSizeDiff=0.0933977;ClusterMaxEditDist=0.0933977;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=46693;DistForward=45403;DistMin=45403;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:56401203-56401533;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3959.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:30:0|1:30:6:0:31:./.:0:0:0:0:0/1:25:22:0/1:21:10:.:.:.
chr8	56658598	HG2_Ill_manta_2694	GTGCGGTGGCTTGTGCCTGTAATCCCAGCACTTTGGGAGGCCAAGACAGGTGGATCACTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACATGGCAAAACCCTGTCTCTACAAAAAAATGTAAAAATTATCCAGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6715:HG2_PB_SVrefine2PBcRplusDovetail_11022:HG2_Ill_Spiral_659:HG2_PB_pbsv_9456:HG4_PB_HySA_13713:HG4_Ill_MetaSV_5316:HG4_PB_pbsv_9473:HG4_PB_SVrefine2Falcon1Dovetail_5783:HG4_Ill_svaba_11951:HG4_Ill_scalpel_8793:HG4_Ill_GATKHC_15313:HG4_Ill_GATKHCSBGrefine_6537:HG4_10X_allpass_1828:HG2_Ill_svaba_11853:HG2_Ill_manta_2694:HG2_Ill_breakscan11_1365:HG2_Ill_SpiralSDKrefine_16937:HG2_Ill_MetaSV_5080:HG2_Ill_GATKHCSBGrefine_6427:HG4_Ill_Spiral_769:HG4_Ill_SVrefine2DISCOVARDovetail_6752:HG3_PB_SVrefine2Falcon1Dovetail_5742;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6427:HG2_Ill_MetaSV_5080:HG2_Ill_SpiralSDKrefine_16937:HG2_Ill_breakscan11_1365:HG2_Ill_manta_2694:HG2_Ill_svaba_11853:HG4_10X_allpass_1828:HG4_Ill_GATKHCSBGrefine_6537:HG4_Ill_GATKHC_15313:HG4_Ill_scalpel_8793:HG4_Ill_svaba_11951:HG4_PB_SVrefine2Falcon1Dovetail_5783:HG4_PB_pbsv_9473;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0145985;ClusterMaxSizeDiff=0.0145985;ClusterMaxEditDist=0.0441176;PBcalls=6;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-136;DistBack=-132;DistForward=141;DistMin=-132;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=32;REFWIDENED=8:56658594-56658761;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3960.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:18:0|1:30:2:0:12:./.:0:0:0:0:0/1:21:7:./.:.:.:.:1013:.
chr8	56676277	HG2_PB_SVrefine2PB10Xhap12_6908	ATCAATATCTACCTAATTCAGTAAAAGTAACCCAATTCTTTACGAAATGATTACATACATTAATGGATATTGTTTTTTTATAGAGAAACAGATTTACAAAAGTTCATTATGCAATAAAAATTTATCAGTAC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_9474:HG2_PB_HySA_16991:HG4_PB_HySA_13715:HG4_PB_SVrefine2Falcon1Dovetail_5784:HG4_Ill_svaba_11953:HG4_Ill_scalpel_8795:HG4_Ill_manta_2310:HG4_Ill_SVrefine2DISCOVARDovetail_6753:HG4_Ill_MetaSV_5317:HG4_Ill_GATKHCSBGrefine_6538:HG4_Ill_Cortex_3644:HG4_Ill_250bpfermikitraw_12688:HG4_Ill_150bpfermikitraw_12163:HG4_CG_vcfBeta_6064:HG4_10X_allpass_1829:HG3_PB_pbsv_9211:HG3_PB_SVrefine2PBcRDovetail_4288:HG3_PB_SVrefine2Falcon1Dovetail_5743:HG3_Ill_svaba_11965:HG3_Ill_scalpel_9135:HG3_Ill_manta_2200:HG3_Ill_SVrefine2DISCOVARDovetail_6965:HG3_Ill_MetaSV_5260:HG3_Ill_GATKHCSBGrefine_6334:HG3_Ill_Cortex_3668:HG3_CG_vcfBeta_5123:HG3_10X_allpass_1885:HG2_PB_pbsv_9457:HG2_PB_SVrefine2PBcRplusDovetail_11023:HG2_PB_SVrefine2PB10Xhap12_6908:HG2_PB_SVrefine2Falcon1plusDovetail_11816:HG2_Ill_svaba_11854:HG2_Ill_scalpel_9027:HG2_Ill_manta_2695:HG2_Ill_SVrefine2DISCOVARplusDovetail_12896:HG2_Ill_MetaSV_5081:HG2_Ill_GATKHCSBGrefine_6428:HG2_Ill_Cortex_8870:HG2_Ill_250bpfermikitraw_12744:HG2_Ill_150bpfermikitraw_11984:HG2_CG_vcfBeta_5377:HG2_10X_allpass_1577:HG2_10X_SVrefine210Xhap12_6716:HG4_Ill_Krunchall_13325:HG3_Ill_Krunchall_12739:HG2_Ill_breakscan11_1366:HG2_Ill_Krunchall_13066;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6716:HG2_10X_allpass_1577:HG2_CG_vcfBeta_5377:HG2_Ill_150bpfermikitraw_11984:HG2_Ill_250bpfermikitraw_12744:HG2_Ill_Cortex_8870:HG2_Ill_GATKHCSBGrefine_6428:HG2_Ill_MetaSV_5081:HG2_Ill_SVrefine2DISCOVARplusDovetail_12896:HG2_Ill_manta_2695:HG2_Ill_scalpel_9027:HG2_Ill_svaba_11854:HG2_PB_SVrefine2Falcon1plusDovetail_11816:HG2_PB_SVrefine2PB10Xhap12_6908:HG2_PB_SVrefine2PBcRplusDovetail_11023:HG2_PB_pbsv_9457:HG3_10X_allpass_1885:HG3_CG_vcfBeta_5123:HG3_Ill_Cortex_3668:HG3_Ill_GATKHCSBGrefine_6334:HG3_Ill_MetaSV_5260:HG3_Ill_SVrefine2DISCOVARDovetail_6965:HG3_Ill_manta_2200:HG3_Ill_scalpel_9135:HG3_Ill_svaba_11965:HG3_PB_SVrefine2Falcon1Dovetail_5743:HG3_PB_SVrefine2PBcRDovetail_4288:HG3_PB_pbsv_9211:HG4_10X_allpass_1829:HG4_CG_vcfBeta_6064:HG4_Ill_150bpfermikitraw_12163:HG4_Ill_250bpfermikitraw_12688:HG4_Ill_Cortex_3644:HG4_Ill_GATKHCSBGrefine_6538:HG4_Ill_MetaSV_5317:HG4_Ill_SVrefine2DISCOVARDovetail_6753:HG4_Ill_manta_2310:HG4_Ill_scalpel_8795:HG4_Ill_svaba_11953:HG4_PB_SVrefine2Falcon1Dovetail_5784;NumExactMatchSVs=40;ClusterMaxShiftDist=0.0228137;ClusterMaxSizeDiff=0.0228137;ClusterMaxEditDist=0.0378788;PBcalls=11;Illcalls=29;TenXcalls=4;CGcalls=3;PBexactcalls=8;Illexactcalls=25;TenXexactcalls=4;CGexactcalls=3;HG2count=19;HG3count=13;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-130;DistBack=9011;DistForward=-131;DistMin=-131;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:56676278-56676408;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3961.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:49:1/1:4:16:0:9:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr8	56679561	HG4_Ill_150bpfermikitraw_12164	GACCTAGCAAGTACTTAAATATCTTTCTGCCTCAGTTTCTTCATTTGTAAAATAAAAATAGCATCTACCTAATAAGACTATCGTGAAGATTACGTGTAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6717:HG2_PB_HySA_16992:HG3_PB_pbsv_9212:HG2_PB_pbsv_9458:HG4_PB_pbsv_9475:HG4_PB_HySA_13716:HG4_PB_SVrefine2Falcon1Dovetail_5785:HG4_Ill_svaba_11954:HG4_Ill_SVrefine2DISCOVARDovetail_6754:HG4_Ill_GATKHCSBGrefine_6539:HG4_Ill_250bpfermikitraw_12689:HG4_Ill_150bpfermikitraw_12164:HG4_10X_allpass_1830:HG3_PB_SVrefine2PBcRDovetail_4289:HG3_PB_SVrefine2Falcon1Dovetail_5744:HG3_Ill_svaba_11966:HG3_Ill_SVrefine2DISCOVARDovetail_6966:HG3_Ill_GATKHCSBGrefine_6335:HG2_PB_SVrefine2PBcRplusDovetail_11024:HG2_PB_SVrefine2PB10Xhap12_6909:HG2_PB_SVrefine2Falcon1plusDovetail_11817:HG2_Ill_svaba_11855:HG2_Ill_SpiralSDKrefine_16939:HG2_Ill_SVrefine2DISCOVARplusDovetail_12897:HG2_Ill_GATKHCSBGrefine_6429:HG2_Ill_250bpfermikitraw_12745:HG2_Ill_150bpfermikitraw_11985;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6717:HG4_PB_SVrefine2Falcon1Dovetail_5785:HG4_Ill_svaba_11954:HG4_Ill_SVrefine2DISCOVARDovetail_6754:HG4_Ill_GATKHCSBGrefine_6539:HG4_Ill_250bpfermikitraw_12689:HG4_Ill_150bpfermikitraw_12164:HG4_10X_allpass_1830:HG3_PB_SVrefine2PBcRDovetail_4289:HG3_PB_SVrefine2Falcon1Dovetail_5744:HG3_Ill_svaba_11966:HG3_Ill_SVrefine2DISCOVARDovetail_6966:HG3_Ill_GATKHCSBGrefine_6335:HG2_PB_SVrefine2PBcRplusDovetail_11024:HG2_PB_SVrefine2PB10Xhap12_6909:HG2_PB_SVrefine2Falcon1plusDovetail_11817:HG2_Ill_svaba_11855:HG2_Ill_SpiralSDKrefine_16939:HG2_Ill_SVrefine2DISCOVARplusDovetail_12897:HG2_Ill_GATKHCSBGrefine_6429:HG2_Ill_250bpfermikitraw_12745:HG2_Ill_150bpfermikitraw_11985;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0196078;PBcalls=11;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-102;DistBack=3115;DistForward=23477;DistMin=3115;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=104;REFWIDENED=8:56679562-56679767;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3962.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:45:1/1:0:15:1:15:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr8	56967316	HG4_Ill_svaba_11957	CCCCAGGTTGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTA	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5082:HG4_PB_assemblyticsfalcon_25945:HG4_Ill_Krunchall_13328:HG3_PB_assemblyticsfalcon_26400:HG2_PB_assemblyticsfalcon_26514:HG2_PB_assemblyticsPBcR_25707:HG2_PB_pbsv_9460:HG4_PB_pbsv_9476:HG4_PB_SVrefine2Falcon1Dovetail_5786:HG4_Ill_svaba_11957:HG4_Ill_scalpel_8798:HG4_Ill_manta_2311:HG4_Ill_SVrefine2DISCOVARDovetail_6756:HG4_Ill_MetaSV_5318:HG4_Ill_GATKHCSBGrefine_6543:HG4_10X_allpass_1831:HG3_PB_pbsv_9215:HG3_Ill_svaba_11968:HG3_Ill_scalpel_9136:HG3_Ill_manta_2201:HG3_Ill_SVrefine2DISCOVARDovetail_6967:HG3_Ill_MetaSV_5262:HG3_Ill_GATKHCSBGrefine_6337:HG3_10X_allpass_1886:HG2_PB_SVrefine2PBcRplusDovetail_11025:HG2_PB_SVrefine2Falcon1plusDovetail_11818:HG2_Ill_svaba_11858:HG2_Ill_scalpel_9029:HG2_Ill_manta_2696:HG2_Ill_SVrefine2DISCOVARplusDovetail_12898:HG2_Ill_MetaSV_5083:HG2_Ill_GATKHCSBGrefine_6430:HG2_10X_allpass_1579:HG2_10X_SVrefine210Xhap12_6719:HG2_Ill_breakscan11_1367:HG4_PB_HySA_13719:HG3_PB_SVrefine2Falcon1Dovetail_5745:HG2_PB_HySA_16996;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6719:HG2_10X_allpass_1579:HG2_Ill_GATKHCSBGrefine_6430:HG2_Ill_MetaSV_5083:HG2_Ill_SVrefine2DISCOVARplusDovetail_12898:HG2_Ill_manta_2696:HG2_Ill_scalpel_9029:HG2_Ill_svaba_11858:HG2_PB_SVrefine2Falcon1plusDovetail_11818:HG2_PB_SVrefine2PBcRplusDovetail_11025:HG3_10X_allpass_1886:HG3_Ill_GATKHCSBGrefine_6337:HG3_Ill_MetaSV_5262:HG3_Ill_SVrefine2DISCOVARDovetail_6967:HG3_Ill_manta_2201:HG3_Ill_scalpel_9136:HG3_Ill_svaba_11968:HG3_PB_pbsv_9215:HG4_10X_allpass_1831:HG4_Ill_GATKHCSBGrefine_6543:HG4_Ill_MetaSV_5318:HG4_Ill_SVrefine2DISCOVARDovetail_6756:HG4_Ill_manta_2311:HG4_Ill_scalpel_8798:HG4_Ill_svaba_11957:HG4_PB_SVrefine2Falcon1Dovetail_5786;NumExactMatchSVs=26;ClusterMaxShiftDist=0.211604;ClusterMaxSizeDiff=0.211604;ClusterMaxEditDist=0.211604;PBcalls=13;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-153;DistBack=143506;DistForward=12044;DistMin=12044;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:56967317-56967484;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3963.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:1:35:0:25:./.:0:0:0:0:1/1:0:45:./.:.:.:.:.:.
chr8	57300202	HG2_Ill_manta_2697	CTGACACACAACCAGAAGGCTTATGTGTGTTTATTAATAGCTCTTACCACTACCTATGGAGCTGATTCAAGGCAAACAACAGAGCACATACACAACGTAAAGATACAAGTTCAGAGG	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_13073:HG4_Ill_MetaSV_5319:HG2_Ill_MetaSV_5084:HG4_Ill_GATKHC_15319:HG4_Ill_GATKHCSBGrefine_6545:HG2_Ill_GATKHC_15253:HG2_Ill_GATKHCSBGrefine_6432:HG4_PB_SVrefine2Falcon1Dovetail_5789:HG4_Ill_manta_2312:HG4_Ill_SVrefine2DISCOVARDovetail_6760:HG4_Ill_Cortex_3645:HG4_CG_vcfBeta_6068:HG2_Ill_manta_2697:HG2_Ill_SVrefine2DISCOVARplusDovetail_12902:HG2_Ill_Cortex_8871:HG2_CG_vcfBeta_5379:HG2_10X_SVrefine210Xhap12_6720:HG2_Ill_breakscan11_1368:HG2_Ill_SpiralSDKrefine_16942:HG4_Ill_Spiral_771:HG2_Ill_Spiral_661:HG4_PB_assemblyticsfalcon_25948:HG4_PB_HySA_13721:HG4_PB_pbsv_9479:HG4_Ill_svaba_11960:HG4_Ill_scalpel_8799:HG4_Ill_250bpfermikitraw_12695:HG4_Ill_150bpfermikitraw_12172:HG4_10X_allpass_1832:HG2_PB_pbsv_9463:HG2_Ill_svaba_11862:HG2_Ill_scalpel_9030:HG2_10X_allpass_1580:HG4_Ill_Krunchall_13331;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6720:HG2_CG_vcfBeta_5379:HG2_Ill_Cortex_8871:HG2_Ill_SVrefine2DISCOVARplusDovetail_12902:HG2_Ill_manta_2697:HG4_CG_vcfBeta_6068:HG4_Ill_Cortex_3645:HG4_Ill_SVrefine2DISCOVARDovetail_6760:HG4_Ill_manta_2312:HG4_PB_SVrefine2Falcon1Dovetail_5789;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0171674;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.0258621;PBcalls=5;Illcalls=24;TenXcalls=3;CGcalls=2;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=2;HG2count=16;HG3count=0;HG4count=18;NumTechs=4;NumTechsExact=4;SVLEN=-116;DistBack=59863;DistForward=-106;DistMin=-106;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:57300202-57300318;PctSeqSimilarity=0.9957;PctSizeSimilarity=0.9914;PctRecOverlap=0.9915;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=3964.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:31:0|1:51:0:1:31:./.:0:0:0:0:0/1:37:27:./.:.:.:.:.:.
chr8	57531391	HG2_Ill_250bpfermikitraw_12755	AAAGGGAGTTAATGCCCAGGGTATTTAGTTGTATTTAGAGGAGAAGAGCAATGCC	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_26517:HG2_PB_HySA_17001:HG3_PB_pbsv_9216:HG2_PB_pbsv_9464:HG3_Ill_svaba_11973:HG3_Ill_Krunchall_12745:HG3_Ill_GATKHC_15221:HG3_Ill_GATKHCSBGrefine_6340:HG3_Ill_250bpfermikitraw_12386:HG3_Ill_150bpfermikitraw_12021:HG2_PB_assemblyticsPBcR_25714:HG2_Ill_svaba_11866:HG2_Ill_scalpel_9033:HG2_Ill_SpiralSDKrefine_16945:HG2_Ill_Krunchall_13076:HG2_Ill_GATKHC_15256:HG2_Ill_GATKHCSBGrefine_6433:HG2_Ill_250bpfermikitraw_12755:HG2_Ill_150bpfermikitraw_11991;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11991:HG2_Ill_250bpfermikitraw_12755:HG2_Ill_GATKHCSBGrefine_6433:HG2_Ill_GATKHC_15256:HG2_Ill_Krunchall_13076:HG2_Ill_SpiralSDKrefine_16945:HG2_Ill_scalpel_9033:HG2_Ill_svaba_11866:HG2_PB_assemblyticsPBcR_25714:HG3_Ill_150bpfermikitraw_12021:HG3_Ill_250bpfermikitraw_12386:HG3_Ill_GATKHCSBGrefine_6340:HG3_Ill_GATKHC_15221:HG3_Ill_Krunchall_12745:HG3_Ill_svaba_11973;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0366972;PBcalls=5;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=45;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=99;REFWIDENED=8:57531346-57531498;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3965.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:26:0|1:27:4:5:23:./.:0:0:0:0:0/1:24:19:./.:.:.:.:.:.
chr8	57758299	HG2_Ill_250bpfermikitraw_12757	TATATATAATATATAATATATATATAATACATATTATATATAATATATAATATATATAATACATATATTATATA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_9466:HG4_Ill_svaba_11965:HG4_Ill_scalpel_8803:HG4_Ill_manta_2313:HG4_Ill_Krunchall_13336:HG4_Ill_GATKHC_15326:HG4_Ill_GATKHCSBGrefine_6547:HG4_Ill_250bpfermikitraw_12700:HG4_Ill_150bpfermikitraw_12178:HG3_Ill_svaba_11974:HG3_Ill_scalpel_9139:HG3_Ill_manta_2202:HG3_Ill_Krunchall_12746:HG3_Ill_GATKHC_15223:HG3_Ill_GATKHCSBGrefine_6341:HG3_Ill_250bpfermikitraw_12387:HG3_Ill_150bpfermikitraw_12022:HG2_Ill_svaba_11868:HG2_Ill_manta_2698:HG2_Ill_SpiralSDKrefine_16947:HG2_Ill_Krunchall_13078:HG2_Ill_GATKHC_15259:HG2_Ill_GATKHCSBGrefine_6435:HG2_Ill_250bpfermikitraw_12757:HG2_Ill_150bpfermikitraw_11994:HG3_PB_pbsv_9218:HG4_PB_pbsv_9481:HG4_Ill_SVrefine2DISCOVARDovetail_6764:HG2_10X_SVrefine210Xhap12_6723;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11994:HG2_Ill_250bpfermikitraw_12757:HG2_Ill_GATKHCSBGrefine_6435:HG2_Ill_GATKHC_15259:HG2_Ill_Krunchall_13078:HG2_Ill_SpiralSDKrefine_16947:HG2_Ill_manta_2698:HG2_Ill_svaba_11868:HG3_Ill_150bpfermikitraw_12022:HG3_Ill_250bpfermikitraw_12387:HG3_Ill_GATKHCSBGrefine_6341:HG3_Ill_GATKHC_15223:HG3_Ill_Krunchall_12746:HG3_Ill_manta_2202:HG3_Ill_scalpel_9139:HG3_Ill_svaba_11974:HG4_Ill_150bpfermikitraw_12178:HG4_Ill_250bpfermikitraw_12700:HG4_Ill_GATKHCSBGrefine_6547:HG4_Ill_GATKHC_15326:HG4_Ill_Krunchall_13336:HG4_Ill_manta_2313:HG4_Ill_scalpel_8803:HG4_Ill_svaba_11965;NumExactMatchSVs=24;ClusterMaxShiftDist=0.156028;ClusterMaxSizeDiff=0.156028;ClusterMaxEditDist=0.197183;PBcalls=3;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-73;DistBack=25788;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=115;REFWIDENED=8:57758273-57758460;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3966.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:29:0|1:36:0:4:34:./.:0:0:0:0:0/1:22:19:./.:.:.:.:.:.
chr8	57779822	HG3_PB_assemblyticsfalcon_26406	AAACCCTGGCAAGGTTTGTTTTTACTATAGAAAAAAAAATCCCAAGATTGCTTCACCTCTGCAGTGAATTTCCTTCATCTATACATTTGGTGTAAGAGATTTTATTA	TT	20	PASS	ClusterIDs=HG4_Ill_Krunchall_13337:HG4_Ill_GATKHC_15327:HG4_Ill_GATKHCSBGrefine_6548:HG2_Ill_GATKHC_15260:HG2_Ill_GATKHCSBGrefine_6436:HG2_PB_HySA_17002:HG4_Ill_Cortex_3648:HG2_Ill_Cortex_8875:HG4_PB_SVrefine2Falcon1Dovetail_5792:HG4_Ill_manta_2314:HG3_PB_assemblyticsfalcon_26406:HG3_PB_SVrefine2Falcon1Dovetail_5748:HG2_PB_SVrefine2PBcRplusDovetail_11028:HG2_PB_SVrefine2Falcon1plusDovetail_11819:HG2_Ill_manta_2699:HG2_10X_SVrefine210Xhap12_6724:HG2_Ill_SpiralSDKrefine_16948:HG4_Ill_Spiral_772:HG2_Ill_Spiral_662:HG4_PB_assemblyticsfalcon_25952:HG2_PB_assemblyticsfalcon_26519:HG2_PB_assemblyticsPBcR_25717:HG4_Ill_svaba_11966:HG4_10X_allpass_1833:HG2_Ill_svaba_11869:HG2_10X_allpass_1581:HG4_PB_pbsv_9482:HG2_PB_pbsv_9467;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6724:HG2_Ill_manta_2699:HG2_PB_SVrefine2Falcon1plusDovetail_11819:HG2_PB_SVrefine2PBcRplusDovetail_11028:HG3_PB_SVrefine2Falcon1Dovetail_5748:HG3_PB_assemblyticsfalcon_26406:HG4_Ill_manta_2314:HG4_PB_SVrefine2Falcon1Dovetail_5792;NumExactMatchSVs=8;ClusterMaxShiftDist=0.287234;ClusterMaxSizeDiff=0.287234;ClusterMaxEditDist=0.287234;PBcalls=11;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-105;DistBack=-140;DistForward=101552;DistMin=-140;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:57779822-57779928;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9905;PctRecOverlap=0.972;SizeDiff=1;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=98;MatchId=3967.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:0|1:37:1:0:31:./.:0:0:0:0:0/1:38:19:./.:.:.:.:.:.
chr8	59075952	HG2_Ill_GATKHC_15266	AAAGAAAGAAAGAAAAGGAAGGAAGGAAAGAGGGGAGGAAGGAAGGAAGGAAAAAGAGAAGAGAAAGAAAGGAAGAAAGAAAAG	A	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_16951:HG4_PB_HySA_13729:HG2_PB_assemblyticsfalcon_26522:HG2_PB_assemblyticsPBcR_25722:HG4_PB_pbsv_9487:HG4_Ill_svaba_11972:HG4_Ill_scalpel_8808:HG4_Ill_Krunchall_13343:HG4_Ill_GATKHC_15335:HG4_Ill_GATKHCSBGrefine_6550:HG4_Ill_250bpfermikitraw_12706:HG4_Ill_150bpfermikitraw_12182:HG3_PB_assemblyticsfalcon_26408:HG3_Ill_svaba_11983:HG3_Ill_scalpel_9144:HG3_Ill_GATKHC_15233:HG3_Ill_GATKHCSBGrefine_6343:HG3_Ill_250bpfermikitraw_12394:HG2_PB_pbsv_9471:HG2_Ill_svaba_11877:HG2_Ill_scalpel_9037:HG2_Ill_Krunchall_13083:HG2_Ill_GATKHC_15266:HG2_Ill_GATKHCSBGrefine_6438:HG2_Ill_250bpfermikitraw_12763:HG2_Ill_150bpfermikitraw_11998:HG3_PB_HySA_14168:HG3_PB_pbsv_9225;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_11998:HG2_Ill_250bpfermikitraw_12763:HG2_Ill_GATKHCSBGrefine_6438:HG2_Ill_GATKHC_15266:HG2_Ill_Krunchall_13083:HG2_Ill_scalpel_9037:HG2_Ill_svaba_11877:HG2_PB_pbsv_9471:HG3_Ill_250bpfermikitraw_12394:HG3_Ill_GATKHCSBGrefine_6343:HG3_Ill_GATKHC_15233:HG3_Ill_scalpel_9144:HG3_Ill_svaba_11983:HG3_PB_assemblyticsfalcon_26408:HG4_Ill_150bpfermikitraw_12182:HG4_Ill_250bpfermikitraw_12706:HG4_Ill_GATKHCSBGrefine_6550:HG4_Ill_GATKHC_15335:HG4_Ill_Krunchall_13343:HG4_Ill_scalpel_8808:HG4_Ill_svaba_11972:HG4_PB_pbsv_9487;NumExactMatchSVs=22;ClusterMaxShiftDist=0.091954;ClusterMaxSizeDiff=0.091954;ClusterMaxEditDist=0.205714;PBcalls=8;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-83;DistBack=-4;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=272;REFWIDENED=8:59075741-59076095;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3968.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:23:0|1:16:1:3:22:./.:0:0:0:0:0/1:39:30:./.:.:.:.:.:.
chr8	59078452	HG2_10X_allpass_1582	TAGAAATTCTGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCATGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4295:HG4_10X_allpass_1834:HG2_PB_assemblyticsfalcon_26523:HG2_PB_SVrefine2Falcon1plusDovetail_11824:HG4_Ill_Krunchall_13344:HG3_Ill_Krunchall_12754:HG2_Ill_Krunchall_13084:HG2_PB_PB10Xdip_30170:HG4_PB_assemblyticsfalcon_25957:HG2_PB_SVrefine2PB10Xhap12_6911:HG4_PB_HySA_13730:HG4_Ill_Spiral_773:HG3_Ill_Spiral_9949:HG2_Ill_Spiral_663:HG3_PB_pbsv_9226:HG2_PB_pbsv_9472:HG2_PB_SVrefine2PBcRplusDovetail_11033:HG2_PB_assemblyticsPBcR_25723:HG3_PB_HySA_14169:HG4_PB_pbsv_9488:HG4_Ill_MetaSV_5321:HG3_Ill_MetaSV_5264:HG2_Ill_tnscope_1077:HG4_PB_SVrefine2PBcRDovetail_4713:HG4_PB_SVrefine2Falcon1Dovetail_5794:HG4_Ill_manta_2315:HG4_Ill_SVrefine2DISCOVARDovetail_6768:HG4_Ill_GATKHCSBGrefine_6551:HG3_PB_assemblyticsfalcon_26409:HG3_PB_SVrefine2Falcon1Dovetail_5751:HG3_Ill_SVrefine2DISCOVARDovetail_6976:HG3_Ill_GATKHCSBGrefine_6344:HG3_10X_allpass_1887:HG2_PB_SVrefine2Falcon1plusDovetail_11823:HG2_PB_HySA_17006:HG2_Ill_manta_2700:HG2_Ill_breakscan11_1369:HG2_Ill_MetaSV_5086:HG2_Ill_GATKHCSBGrefine_6439:HG2_10X_allpass_1582:HG2_10X_SVrefine210Xhap12_6729;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6729:HG2_10X_allpass_1582:HG2_Ill_GATKHCSBGrefine_6439:HG2_Ill_MetaSV_5086:HG2_Ill_breakscan11_1369:HG2_Ill_manta_2700:HG2_PB_HySA_17006:HG2_PB_SVrefine2Falcon1plusDovetail_11823:HG3_10X_allpass_1887:HG3_Ill_GATKHCSBGrefine_6344:HG3_Ill_SVrefine2DISCOVARDovetail_6976:HG3_PB_SVrefine2Falcon1Dovetail_5751:HG3_PB_assemblyticsfalcon_26409:HG4_Ill_GATKHCSBGrefine_6551:HG4_Ill_SVrefine2DISCOVARDovetail_6768:HG4_Ill_manta_2315:HG4_PB_SVrefine2Falcon1Dovetail_5794:HG4_PB_SVrefine2PBcRDovetail_4713;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0692771;ClusterMaxSizeDiff=0.0692771;ClusterMaxEditDist=0.0692771;PBcalls=19;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=2443;DistForward=-321;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=8:59078453-59078800;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3969.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:30:0|1:20:1:1:30:./.:0:0:0:0:0/1:33:15:0/1:17:5:.:.:.
chr8	60641310	HG3_PB_SVrefine2Falcon1Dovetail_5753	ATAGCTTTTATGTGGGTACAGGATTGTCATAAGAAGGACATACCTATAAACTCTAATATGATTTGAGAAAAAGTGAAGTCATTATGTGATAACCTAACAAAAAGAATTCGAAGTCTCTAAAGTTGGAGAATTTAATGCCAGCAAAAGATGGTTTGATAATTTTAGAAAGAGGTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6733:HG4_PB_pbsv_9492:HG3_PB_pbsv_9229:HG2_PB_pbsv_9477:HG2_PB_HySA_17022:HG4_PB_SVrefine2PBcRDovetail_4715:HG4_PB_SVrefine2Falcon1Dovetail_5797:HG4_Ill_SVrefine2DISCOVARDovetail_6780:HG4_Ill_GATKHC_15348:HG4_Ill_GATKHCSBGrefine_6556:HG4_Ill_250bpfermikitraw_12717:HG4_Ill_150bpfermikitraw_12193:HG4_10X_allpass_1836:HG3_PB_SVrefine2Falcon1Dovetail_5753:HG3_Ill_SVrefine2DISCOVARDovetail_6984:HG3_Ill_GATKHCSBGrefine_6348:HG2_Ill_GATKHCSBGrefine_6443:HG2_10X_allpass_1583;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6733:HG4_PB_SVrefine2PBcRDovetail_4715:HG4_PB_SVrefine2Falcon1Dovetail_5797:HG4_Ill_SVrefine2DISCOVARDovetail_6780:HG4_Ill_GATKHC_15348:HG4_Ill_GATKHCSBGrefine_6556:HG4_Ill_250bpfermikitraw_12717:HG4_Ill_150bpfermikitraw_12193:HG4_10X_allpass_1836:HG3_PB_SVrefine2Falcon1Dovetail_5753:HG3_Ill_SVrefine2DISCOVARDovetail_6984:HG3_Ill_GATKHCSBGrefine_6348:HG2_Ill_GATKHCSBGrefine_6443:HG2_10X_allpass_1583;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0114943;ClusterMaxSizeDiff=0.0114943;ClusterMaxEditDist=0.017341;PBcalls=7;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-173;DistBack=-174;DistForward=-64;DistMin=-174;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=180;REFWIDENED=8:60641311-60641663;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3970.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:0|1:34:3:1:29:./.:0:0:0:0:0/1:45:19:./.:.:.:.:.:.
chr8	61945872	HG2_PB_SVrefine2PB10Xhap12_6917	CCTGGTGTCTTTCCCCTCCTCCTGGGGTAGCAGGGCAGCCTGGCTTGTTCTTCTCCCAAGGATGACAGAAATGCAGAAAAGCAAGCAGTCACAAGTCCTTTGCTTGCATGAAGTCCGCTGTCATCCCATTATCCAGAGCAAGTCACAGGG	C	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30177:HG3_PB_pbsv_9234:HG2_PB_assemblyticsPBcR_25740:HG3_PB_SVrefine2Falcon1Dovetail_5759:HG2_Ill_Spiral_665:HG3_PB_assemblyticsfalcon_26427:HG3_Ill_svaba_11999:HG3_Ill_MetaSV_5269:HG3_Ill_GATKHCSBGrefine_6352:HG3_Ill_Cortex_3677:HG2_PB_pbsv_9482:HG2_PB_assemblyticsfalcon_26542:HG2_PB_SVrefine2PBcRplusDovetail_11039:HG2_PB_SVrefine2PB10Xhap12_6917:HG2_PB_SVrefine2Falcon1plusDovetail_11830:HG2_Ill_svaba_11886:HG2_Ill_manta_2705:HG2_Ill_breakscan11_1370:HG2_Ill_SpiralSDKrefine_16960:HG2_Ill_MetaSV_5090:HG2_Ill_GATKHCSBGrefine_6446:HG2_Ill_Cortex_8885:HG2_10X_allpass_1584:HG2_10X_SVrefine210Xhap12_6737;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6737:HG2_10X_allpass_1584:HG2_Ill_Cortex_8885:HG2_Ill_GATKHCSBGrefine_6446:HG2_Ill_MetaSV_5090:HG2_Ill_SpiralSDKrefine_16960:HG2_Ill_breakscan11_1370:HG2_Ill_manta_2705:HG2_Ill_svaba_11886:HG2_PB_SVrefine2Falcon1plusDovetail_11830:HG2_PB_SVrefine2PB10Xhap12_6917:HG2_PB_SVrefine2PBcRplusDovetail_11039:HG2_PB_assemblyticsfalcon_26542:HG2_PB_pbsv_9482:HG3_Ill_Cortex_3677:HG3_Ill_GATKHCSBGrefine_6352:HG3_Ill_MetaSV_5269:HG3_Ill_svaba_11999;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0469799;ClusterMaxSizeDiff=0.0469799;ClusterMaxEditDist=0.0469799;PBcalls=10;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-149;DistBack=54503;DistForward=-146;DistMin=-146;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=8:61945873-61946025;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3971.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:38:0|1:28:6:5:29:./.:0:0:0:0:0/1:47:20:./.:.:.:.:.:.
chr8	62930143	HG3_Ill_SVrefine2DISCOVARDovetail_6994	TATATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_666:HG3_PB_assemblyticsfalcon_26440:HG2_PB_assemblyticsPBcR_25746:HG2_PB_HySA_17037:HG2_10X_allpass_1585:HG3_PB_pbsv_9236:HG2_Ill_breakscan11_1371:HG3_Ill_MetaSV_5270:HG2_Ill_tnscope_1078:HG3_PB_SVrefine2PBcRDovetail_4300:HG3_PB_SVrefine2Falcon1Dovetail_5764:HG3_Ill_scalpel_9167:HG3_Ill_SVrefine2DISCOVARDovetail_6994:HG3_Ill_GATKHCSBGrefine_6354:HG3_10X_allpass_1890:HG2_PB_pbsv_9484:HG2_PB_SVrefine2PBcRplusDovetail_11041:HG2_Ill_scalpel_9054:HG2_Ill_manta_2706:HG2_Ill_SVrefine2DISCOVARplusDovetail_12919:HG2_Ill_MetaSV_5091:HG2_Ill_GATKHCSBGrefine_6448:HG3_Ill_Spiral_9975;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6448:HG2_Ill_MetaSV_5091:HG2_Ill_SVrefine2DISCOVARplusDovetail_12919:HG2_Ill_manta_2706:HG2_Ill_scalpel_9054:HG2_PB_SVrefine2PBcRplusDovetail_11041:HG2_PB_pbsv_9484:HG3_10X_allpass_1890:HG3_Ill_GATKHCSBGrefine_6354:HG3_Ill_SVrefine2DISCOVARDovetail_6994:HG3_Ill_scalpel_9167:HG3_PB_SVrefine2Falcon1Dovetail_5764:HG3_PB_SVrefine2PBcRDovetail_4300;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0947712;ClusterMaxSizeDiff=0.0947712;ClusterMaxEditDist=0.0947712;PBcalls=8;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=-325;DistForward=74617;DistMin=-325;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:62930144-62930470;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3972.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:39:0|1:37:2:1:37:./.:0:0:0:0:0/1:25:24:0/1:24:7:.:.:.
chr8	66311348	HG3_PB_pbsv_9258	ATCTGAAGGTCTCTTGTAATAGATGATAATATGATCTCTGTACACTGGCTTTGTCACAAATGTGAAATATGCCCTGCTAAGCACTAGATGAAATTGTGACACTGTTCCTGGAAAGAATTCTC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_669:HG4_Ill_Cortex_3658:HG3_Ill_Cortex_3685:HG2_Ill_Cortex_8895:HG2_PB_pbsv_9502:HG2_PB_SVrefine2PBcRplusDovetail_11050:HG2_PB_assemblyticsPBcR_25769:HG4_Ill_Krunchall_13388:HG2_Ill_Krunchall_13132:HG3_PB_assemblyticsfalcon_26470:HG2_PB_HySA_17074:HG4_Ill_svaba_12010:HG4_Ill_manta_2323:HG4_Ill_SVrefine2DISCOVARDovetail_6803:HG4_Ill_GATKHCSBGrefine_6575:HG4_CG_vcfBeta_6103:HG3_PB_pbsv_9258:HG3_PB_SVrefine2Falcon1Dovetail_5775:HG3_Ill_svaba_12028:HG3_Ill_manta_2211:HG3_Ill_SVrefine2DISCOVARDovetail_7016:HG3_Ill_GATKHC_15293:HG3_Ill_GATKHCSBGrefine_6364:HG3_CG_vcfBeta_5160:HG2_PB_assemblyticsfalcon_26570:HG2_PB_SVrefine2PB10Xhap12_6928:HG2_PB_SVrefine2Falcon1plusDovetail_11842:HG2_Ill_svaba_11911:HG2_Ill_scalpel_9063:HG2_Ill_SpiralSDKrefine_16981:HG2_Ill_SVrefine2DISCOVARplusDovetail_12934:HG2_Ill_GATKHCSBGrefine_6459:HG2_CG_vcfBeta_5412:HG2_10X_SVrefine210Xhap12_6750:HG4_PB_pbsv_9520;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6750:HG2_CG_vcfBeta_5412:HG2_Ill_GATKHCSBGrefine_6459:HG2_Ill_SVrefine2DISCOVARplusDovetail_12934:HG2_Ill_SpiralSDKrefine_16981:HG2_Ill_scalpel_9063:HG2_Ill_svaba_11911:HG2_PB_SVrefine2Falcon1plusDovetail_11842:HG2_PB_SVrefine2PB10Xhap12_6928:HG2_PB_assemblyticsfalcon_26570:HG3_CG_vcfBeta_5160:HG3_Ill_GATKHCSBGrefine_6364:HG3_Ill_GATKHC_15293:HG3_Ill_SVrefine2DISCOVARDovetail_7016:HG3_Ill_manta_2211:HG3_Ill_svaba_12028:HG3_PB_SVrefine2Falcon1Dovetail_5775:HG3_PB_pbsv_9258:HG4_CG_vcfBeta_6103:HG4_Ill_GATKHCSBGrefine_6575:HG4_Ill_SVrefine2DISCOVARDovetail_6803:HG4_Ill_manta_2323:HG4_Ill_svaba_12010;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0414938;ClusterMaxSizeDiff=0.0414938;ClusterMaxEditDist=0.0414938;PBcalls=11;Illcalls=20;TenXcalls=1;CGcalls=3;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=3;HG2count=17;HG3count=10;HG4count=8;NumTechs=4;NumTechsExact=4;SVLEN=-121;DistBack=-158;DistForward=7911;DistMin=-158;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=8:66311349-66311472;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3973.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:./.:20:9:2:17:./.:0:0:0:0:0/1:39:26:./.:.:.:.:.:.
chr8	68727320	HG3_Ill_scalpel_9189	TAAGATATAAAGTCGGCCGGGCGCGGTGGCTCGTGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAACAAAAAACAAAAAACAAAAAAACA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6757:HG3_PB_assemblyticsfalcon_26480:HG4_PB_assemblyticsfalcon_26017:HG3_PB_HySA_14224:HG4_PB_pbsv_9526:HG4_Ill_Krunchall_13396:HG3_Ill_Krunchall_12816:HG2_Ill_Krunchall_13142:HG4_PB_HySA_13788:HG3_PB_pbsv_9266:HG2_PB_pbsv_9511:HG4_Ill_MetaSV_5330:HG3_Ill_MetaSV_5278:HG2_Ill_tnscope_1079:HG2_Ill_MetaSV_5098:HG4_PB_SVrefine2PBcRDovetail_4730:HG4_PB_SVrefine2Falcon1Dovetail_5814:HG4_Ill_scalpel_8838:HG4_Ill_manta_2325:HG4_Ill_SVrefine2DISCOVARDovetail_6808:HG4_Ill_GATKHCSBGrefine_6580:HG4_10X_allpass_1838:HG3_PB_SVrefine2PBcRDovetail_4311:HG3_PB_SVrefine2Falcon1Dovetail_5780:HG3_Ill_scalpel_9189:HG3_Ill_manta_2213:HG3_Ill_SVrefine2DISCOVARDovetail_7022:HG3_Ill_GATKHCSBGrefine_6371:HG3_10X_allpass_1891:HG2_PB_assemblyticsfalcon_26580:HG2_PB_SVrefine2PB10Xhap12_6932:HG2_PB_SVrefine2Falcon1plusDovetail_11847:HG2_PB_HySA_17088:HG2_Ill_scalpel_9072:HG2_Ill_manta_2712:HG2_Ill_breakscan11_1373:HG2_Ill_GATKHCSBGrefine_6466:HG2_10X_allpass_1586;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6757:HG4_PB_SVrefine2PBcRDovetail_4730:HG4_PB_SVrefine2Falcon1Dovetail_5814:HG4_Ill_scalpel_8838:HG4_Ill_manta_2325:HG4_Ill_SVrefine2DISCOVARDovetail_6808:HG4_Ill_GATKHCSBGrefine_6580:HG4_10X_allpass_1838:HG3_PB_SVrefine2PBcRDovetail_4311:HG3_PB_SVrefine2Falcon1Dovetail_5780:HG3_Ill_scalpel_9189:HG3_Ill_manta_2213:HG3_Ill_SVrefine2DISCOVARDovetail_7022:HG3_Ill_GATKHCSBGrefine_6371:HG3_10X_allpass_1891:HG2_PB_assemblyticsfalcon_26580:HG2_PB_SVrefine2PB10Xhap12_6932:HG2_PB_SVrefine2Falcon1plusDovetail_11847:HG2_PB_HySA_17088:HG2_Ill_scalpel_9072:HG2_Ill_manta_2712:HG2_Ill_breakscan11_1373:HG2_Ill_GATKHCSBGrefine_6466:HG2_10X_allpass_1586;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0764526;ClusterMaxSizeDiff=0.0764526;ClusterMaxEditDist=0.0764526;PBcalls=15;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=-199;DistForward=6181;DistMin=-199;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=8:68727321-68727665;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3974.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:32:0|1:36:1:0:38:./.:0:0:0:0:0/1:38:22:0/1:37:9:.:.:.
chr8	70357613	HG2_Ill_GATKHCSBGrefine_6470	ACAGGTTATGAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6761:HG4_PB_pbsv_9533:HG2_PB_HySA_17106:HG4_Ill_MetaSV_5333:HG3_Ill_MetaSV_5281:HG2_Ill_MetaSV_5100:HG4_Ill_scalpel_8848:HG4_Ill_manta_2329:HG4_Ill_GATKHCSBGrefine_6586:HG4_10X_allpass_1840:HG3_PB_pbsv_9273:HG3_Ill_scalpel_9201:HG3_Ill_manta_2214:HG3_Ill_GATKHCSBGrefine_6376:HG3_10X_allpass_1892:HG2_PB_pbsv_9518:HG2_Ill_scalpel_9083:HG2_Ill_manta_2714:HG2_Ill_GATKHCSBGrefine_6470:HG2_Ill_breakscan11_1374:HG2_PB_SVrefine2PB10Xhap12_6935:HG2_PB_PB10Xdip_30224:HG2_Ill_tnscope_1080:HG4_PB_SVrefine2Falcon1Dovetail_5819:HG4_Ill_SVrefine2DISCOVARDovetail_6813:HG3_PB_SVrefine2Falcon1Dovetail_5786:HG3_Ill_SVrefine2DISCOVARDovetail_7030:HG2_PB_SVrefine2PBcRplusDovetail_11058;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6470:HG2_Ill_manta_2714:HG2_Ill_scalpel_9083:HG2_PB_pbsv_9518:HG3_10X_allpass_1892:HG3_Ill_GATKHCSBGrefine_6376:HG3_Ill_manta_2214:HG3_Ill_scalpel_9201:HG3_PB_pbsv_9273:HG4_10X_allpass_1840:HG4_Ill_GATKHCSBGrefine_6586:HG4_Ill_manta_2329:HG4_Ill_scalpel_8848;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0345369;ClusterMaxSizeDiff=0.0345369;ClusterMaxEditDist=0.166667;PBcalls=9;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=11319;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=330;REFWIDENED=8:70357299-70357941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3975.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:30:0:3:29:./.:0:0:0:0:0/1:27:33:0/1:27:8:.:.:.
chr8	70538354	HG3_Ill_GATKHCSBGrefine_6377	CACAATCCCTGAGCTAGACATAAAGGTTCTCCAAGGCCCCACCAGAGCAGCTAGATACAGTGTCGATTGGTGCAGTCACAAACCTTGAACTAAACACAGGGTGCTGATTGGTGTGTTT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12948:HG4_PB_SVrefine2Falcon1Dovetail_5820:HG4_PB_assemblyticsfalcon_26034:HG3_PB_assemblyticsfalcon_26502:HG3_PB_SVrefine2Falcon1Dovetail_5787:HG4_PB_HySA_13808:HG4_PB_pbsv_9535:HG2_PB_pbsv_9520:HG3_PB_pbsv_9274:HG3_PB_HySA_14241:HG2_PB_HySA_17110:HG4_Ill_svaba_12031:HG4_Ill_scalpel_8849:HG4_Ill_GATKHC_15414:HG4_Ill_GATKHCSBGrefine_6589:HG4_Ill_250bpfermikitraw_12783:HG4_Ill_150bpfermikitraw_12249:HG3_Ill_svaba_12054:HG3_Ill_manta_2215:HG3_Ill_GATKHC_15321:HG3_Ill_GATKHCSBGrefine_6377:HG3_10X_allpass_1893:HG2_Ill_svaba_11935:HG2_Ill_SpiralSDKrefine_17000:HG2_Ill_GATKHC_15358:HG2_Ill_GATKHCSBGrefine_6472:HG4_PB_SVrefine2PBcRDovetail_4736:HG4_Ill_SVrefine2DISCOVARDovetail_6815:HG3_PB_SVrefine2PBcRDovetail_4314:HG3_Ill_SVrefine2DISCOVARDovetail_7031:HG2_PB_SVrefine2PBcRplusDovetail_11059:HG2_PB_SVrefine2PB10Xhap12_6936:HG2_PB_SVrefine2Falcon1plusDovetail_11854;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6472:HG2_Ill_GATKHC_15358:HG2_Ill_SpiralSDKrefine_17000:HG2_Ill_svaba_11935:HG3_10X_allpass_1893:HG3_Ill_GATKHCSBGrefine_6377:HG3_Ill_GATKHC_15321:HG3_Ill_manta_2215:HG3_Ill_svaba_12054:HG4_Ill_150bpfermikitraw_12249:HG4_Ill_250bpfermikitraw_12783:HG4_Ill_GATKHCSBGrefine_6589:HG4_Ill_GATKHC_15414:HG4_Ill_scalpel_8849:HG4_Ill_svaba_12031;NumExactMatchSVs=15;ClusterMaxShiftDist=0.034188;ClusterMaxSizeDiff=0.0255319;ClusterMaxEditDist=0.205128;PBcalls=15;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-117;DistBack=2348;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=201;REFWIDENED=8:70538316-70538633;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3976.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:32:0|1:24:3:2:29:./.:0:0:0:0:0/1:23:18:./.:.:.:.:.:.
chr8	71583555	HG2_PB_SVrefine2PBcRplusDovetail_11061	CATGATCTCATTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTTCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAATCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAAT	C	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_6474:HG2_10X_allpass_1587:HG2_PB_assemblyticsPBcR_25805:HG2_PB_assemblyticsfalcon_26598:HG2_PB_SVrefine2Falcon1plusDovetail_11856:HG4_PB_assemblyticsfalcon_26037:HG4_Ill_Krunchall_13425:HG2_PB_pbsv_9522:HG4_PB_pbsv_9538:HG4_Ill_MetaSV_5334:HG2_Ill_tnscope_1081:HG4_PB_SVrefine2PBcRDovetail_4737:HG4_PB_SVrefine2Falcon1Dovetail_5822:HG4_Ill_SVrefine2DISCOVARDovetail_6821:HG4_Ill_GATKHCSBGrefine_6591:HG4_10X_allpass_1841:HG3_PB_SVrefine2Falcon1Dovetail_5789:HG2_PB_SVrefine2PBcRplusDovetail_11061:HG2_PB_SVrefine2PB10Xhap12_6938:HG2_Ill_breakscan11_1375:HG2_Ill_MetaSV_5102;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6474:HG4_PB_SVrefine2PBcRDovetail_4737:HG4_PB_SVrefine2Falcon1Dovetail_5822:HG4_Ill_SVrefine2DISCOVARDovetail_6821:HG4_Ill_GATKHCSBGrefine_6591:HG4_10X_allpass_1841:HG3_PB_SVrefine2Falcon1Dovetail_5789:HG2_PB_SVrefine2PBcRplusDovetail_11061:HG2_PB_SVrefine2PB10Xhap12_6938:HG2_Ill_breakscan11_1375:HG2_Ill_MetaSV_5102;NumExactMatchSVs=11;ClusterMaxShiftDist=0.162861;ClusterMaxSizeDiff=0.162861;ClusterMaxEditDist=0.162861;PBcalls=11;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1088;DistBack=20584;DistForward=-1075;DistMin=-1075;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=8:71583556-71584659;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3977.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:39:0|1:31:0:1:37:./.:0:0:0:0:0/1:61:17:0/1:82:52:1065:.:.
chr8	71623820	HG4_Ill_150bpfermikitraw_12254	TAAACACAAAGAGGGGAACAATAGACATCAGGGCTTACTTGAGGATGCAGGGTGGGAAGAGGGTGAGGATCAAAAAACTATGTATTGGGTACTAGGCTCACTACCTGGGTGAGGAAATTATTTGTATACCTAACCCCAGTGATACACAATTTACCCATGTAAAAAACCTGCACACGTACCCCTTGAAACTTAAAAGTTGGAAGAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5103:HG4_Ill_Krunchall_13426:HG2_Ill_Krunchall_13165:HG2_PB_pbsv_9523:HG2_PB_HySA_17114:HG4_PB_pbsv_9539:HG4_PB_SVrefine2PBcRDovetail_4738:HG4_Ill_SVrefine2DISCOVARDovetail_6822:HG4_Ill_250bpfermikitraw_12788:HG4_Ill_150bpfermikitraw_12254:HG4_10X_allpass_1842:HG3_PB_SVrefine2Falcon1Dovetail_5790:HG2_PB_SVrefine2Falcon1plusDovetail_11857:HG2_Ill_SVrefine2DISCOVARplusDovetail_12954:HG2_10X_allpass_1588:HG2_10X_SVrefine210Xhap12_6768;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6768:HG2_10X_allpass_1588:HG2_Ill_SVrefine2DISCOVARplusDovetail_12954:HG2_PB_SVrefine2Falcon1plusDovetail_11857:HG3_PB_SVrefine2Falcon1Dovetail_5790:HG4_10X_allpass_1842:HG4_Ill_150bpfermikitraw_12254:HG4_Ill_250bpfermikitraw_12788:HG4_Ill_SVrefine2DISCOVARDovetail_6822:HG4_PB_SVrefine2PBcRDovetail_4738;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0497512;ClusterMaxSizeDiff=0.0497512;ClusterMaxEditDist=0.0603015;PBcalls=6;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-204;DistBack=1;DistForward=-205;DistMin=-205;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=207;REFWIDENED=8:71623821-71624231;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3978.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:24:0|1:50:2:1:22:./.:0:0:0:0:0/1:13:4:./.:.:.:.:.:.
chr8	72214745	HG2_Ill_breakscan11_1376	CAGGCTGAGATTCCATTCCATTTAGTATGCCGAAACAGGAGTTTAATGGCACCCCAGTGGCTTTGGAGACTTAATGCAACTTCCAAAAGGATCTTACTTTAGGGAGAGGTGTACATACTAGAGAATCAGGCTCAGGCAATATTAATTTTTCACCACCAGAATCAAGTTCGCAGGGCCACTCCACCTGCCTTCACATAGGACTTAGGCAAACAGAGCTGCTAAACTCGGACCAGGCCACAGCAGGGGACTTCTGCAGCAGCCTCCTCTACTGGTTTCTTTACCCATCTTTGGGTACTGTCCAGCCCATTCTCTGCAAAGTCAGTAGACTCTCTAATGTGCATGACTGATCTTGTCACTCCCCTGCTAAAAAAAGTAACTTTTAATGGCTCCCTGTTGCCCTCAGGATAATATTCAAACTGCTTACTAGGGTTTATGTATTAGGCCTTAGCTGGTCTAAACCCAGTTTATCTTTTGAACTTCTTTGGTCTTTTCCCAGCAACTGTGACTCCAATGCACCCGGGCATACATTCCAGCCTAACCCTAGTAAACCAACATGCAGCAGGCTTTCTAATGTTACTCCTTACAGCTCCTACTTCCTCCTGTCAAATCCAGGTTAACTTTGATTGCACTTCACAATTCAGCAGAATTTGAAATCCGCTTTCTCAGAAAAGCCTCCCTGAATCCCCATTCTCTCCTCTTTCCCTCTAAACCTGGGTTGCTGAATCAATCCACCTATCATCTGTCCATCTATCTCCATGATATATGTGTGTGTTTATCAATCTCTGTGATGTACGTACATTTGATATACACACACACACACACACACACATCCATGACTTACTAATCAGTATTTTAAGCCAAGTACTAATTGACCTGTAAACTAACAAATACTAATTATATGTAAACTAGTCCTTCCCCTACAAAACAACTAAAAAAACTTCGACATTCCTATAAAAAATTGGATATTTACACCTAACCCATACAAATATCCCCAGAGTGCAAAATATAATAACAATACTAGAGGTGTACATACTAGAGAAGCAGGCTCAAGCAATATTAATTTTTCACGACCAGAATCAAGTTCGCAGGGCCGCTCCACCTGCCTTCACATAGGACTTAGGGTCTGACCAAGTAAATCACAATTCAGTACTCCAAATGGCACCCAAGTGACTTTCCAGACTAAATGCTACTTCCAAGACTGGAACATACAAATATCCCCAGAGTGCAAAATATAATAACAATAAAACAAAATACCCATTGAGTACTCTCTCTATGTTAGGAAGTAGGCTCGCCCGTACATGCTTCACCTATACTCCACAACAACTTGATACTACAGGGTGTATGATCATTCCCATTTTGCAGATAAGGAAACGGAGGGTCAGGTTACAGTAACACAGCTCCAAGGAATGAAGGTGAAACACAAACACAGATCTGTCTGGTTTTAAGGTCTATACAATGCTGTCTTGCCTCCTCTTGCTCGATTCTATATTGTATAATGGGAAGTTCTGATATACACTAAAGTTTTCCCAGGCATTATTTTATAAAACAATTATATTAAAATAATTTATATTTATATCTTGTAAATAATCTCAGGGATTATTTTATAATTATATTAAAAAGTGTTAGAAGCAAAATAGAAGTGACAAGAACAAATAATAATACTTAAACATTTTTGAGTGCTTACATTGAGCCAGCCCAAATAAAGCATTTTGCCTATTAGAACTCACCGATTCCTCACAACCACCCCAGGAGGTGGATGCTGTTACATCCCGTTTATAGACGAAGAAACTGCCAGAGGTAATAAGCAACTGTGGCAGAGCTGGGATTCAGTCCCAGGCACCTGGCTCCAGAACTGACGCTCTTAATCTCTATAGTAAATTGCATCTCAGAATGGCAAGGTTTTTGTCTGTGAGTTATTTCCCTTTTTTATGACCATTTCCAAAATATGCCTGACAAACTGCCTCAGAGTCATTAGGAAGTGCTTATTCTTCCTAGGCAAATACCTGGGCTTCCCTTTCAGACACAGAAATCAGTCTCACTGAGGCAGAAGGACTAGGGTGTGATCTGAAAATCCACATGTTTACCAAATACCTATAAGTGTCTGATTTTTAGTACCAATTCAGGAGGTGTTATAGCAATTGCTTCAAAAATATGTAACTAGTATAACCTTTCTTCTTATACACTAAGAAAGTAATCATTCTCTTCAAGCATTCAGAGCTGAAGCTTCTCAGAGCCTATCTGTGTGGGGTATTTCTGGTTCTTGAGCTGAGCTAAAGATCATCTGGAGTAAGGGGCTCCACTTTGATAGCTAATTCAATGGAGACTTCAGTGCCAACACTACCAGATGGATTTCACCGAAGTTTAGAACGCCACAAAGCAAAGGCAAAACAACAATGCTCATGCTCCCCAGAAAGCTTCAGTGTATGGGCTGCTAGACTCACTTGCAGGCTTAGCAAGAGAGGCACATTTGTGTAGAAGGCTGTCACACACCAGGCTTGAACCTGGATGCTAGAGAGAGACAGGATAAGACATGACCAGGATAAAACAGACCTCCTTCCCTTAACATCAATCCACTGAGAGTTTCTGTTGGATTTGCAAGGGTCTTCACTTACAACTTTTGGTCACAGAATTATTTGTAATGTTTGGAATTCTTTAATCAAAATAATATAGAAGTATTTTCTTTTCTAGAAACAAATGACTTTACATCAAAAGACACCTCCAGATAAATAAAATAGAGCCGCTACATCCTATAATGCAAGGTTTTACATCACATTATATCATGAAAATTCCTCAAAGTAGAAAGAATTCCCATTATAACCCATTATTTCTCAATCAATAAGTTTGGCAGAGATTGCTTCATGTGAAACTTCAATAATTCTCAATAGAGTTTGGGGTGGGAGTGGGGATACCTTCTTACTCATTGGTTAAAAGGAAAAGCTTACCTAGTTATATAACTATTGGCCAATATGGTGAAACTCTGTCTCTACTAAAAATACAAAAATTAGCCGGATGTGTAATCTCAGCTACTTGGGTGGCTGAGGCAGGAGAATCACTTGAACTTGGG	C	20	PASS	ClusterIDs=HG2_PB_pbsv_9526:HG4_10X_allpass_1843:HG2_10X_allpass_1589:HG4_Ill_Krunchall_13429:HG2_Ill_Krunchall_13168:HG2_Ill_tnscope_1082:HG4_Ill_SVrefine2DISCOVARDovetail_6826:HG4_Ill_MetaSV_5337:HG2_PB_SVrefine2PB10Xhap12_6942:HG2_Ill_breakscan11_1376:HG2_Ill_SpiralSDKrefine_17006:HG2_Ill_SVrefine2DISCOVARplusDovetail_12958:HG2_Ill_MetaSV_5106:HG2_10X_SVrefine210Xhap12_6771:HG4_PB_pbsv_9542;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6771:HG2_Ill_MetaSV_5106:HG2_Ill_SVrefine2DISCOVARplusDovetail_12958:HG2_Ill_SpiralSDKrefine_17006:HG2_Ill_breakscan11_1376:HG2_PB_SVrefine2PB10Xhap12_6942:HG4_Ill_MetaSV_5337:HG4_Ill_SVrefine2DISCOVARDovetail_6826;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00457816;ClusterMaxSizeDiff=0.00457816;ClusterMaxEditDist=0.00457816;PBcalls=3;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-3063;DistBack=8332;DistForward=-3057;DistMin=-3057;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=8:72214746-72217815;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3979.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:35:./.:13:16:31:0:./.:0:0:0:0:0/1:58:24:0/1:261:103:3050:.:.
chr8	72551405	HG2_10X_allpass_1590	AGTTTCACTATATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6773:HG3_PB_pbsv_9278:HG4_PB_assemblyticsfalcon_26043:HG3_PB_assemblyticsfalcon_26512:HG2_PB_assemblyticsfalcon_26605:HG4_Ill_Krunchall_13430:HG3_Ill_Krunchall_12840:HG2_Ill_Krunchall_13169:HG2_PB_pbsv_9528:HG4_PB_pbsv_9544:HG4_Ill_MetaSV_5338:HG3_Ill_MetaSV_5283:HG2_Ill_tnscope_1083:HG4_Ill_GATKHCSBGrefine_6593:HG4_10X_allpass_1844:HG3_Ill_scalpel_9206:HG3_Ill_GATKHCSBGrefine_6379:HG3_10X_allpass_1894:HG2_Ill_manta_2717:HG2_Ill_breakscan11_1377:HG2_Ill_MetaSV_5107:HG2_Ill_GATKHCSBGrefine_6476:HG2_10X_allpass_1590:HG4_PB_SVrefine2Falcon1Dovetail_5825:HG4_Ill_SVrefine2DISCOVARDovetail_6829:HG3_PB_SVrefine2PBcRDovetail_4317:HG3_PB_SVrefine2Falcon1Dovetail_5793:HG2_PB_SVrefine2Falcon1plusDovetail_11861;NumClusterSVs=28;ExactMatchIDs=HG2_10X_allpass_1590:HG2_Ill_GATKHCSBGrefine_6476:HG2_Ill_MetaSV_5107:HG2_Ill_breakscan11_1377:HG2_Ill_manta_2717:HG3_10X_allpass_1894:HG3_Ill_GATKHCSBGrefine_6379:HG3_Ill_scalpel_9206:HG4_10X_allpass_1844:HG4_Ill_GATKHCSBGrefine_6593;NumExactMatchSVs=10;ClusterMaxShiftDist=0.100917;ClusterMaxSizeDiff=0.100917;ClusterMaxEditDist=0.100917;PBcalls=10;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-334;DistBack=3144;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=8:72551402-72551752;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3980.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:0|1:22:1:0:26:./.:0:0:0:0:0/1:24:15:0/1:25:4:.:.:.
chr8	73787765	HG4_Ill_GATKHCSBGrefine_6599	TTGCAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATGTCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTACGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAAGGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCACTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCAAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGACCGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1084:HG4_10X_allpass_1845:HG3_10X_allpass_1895:HG2_10X_allpass_1591:HG4_Ill_Krunchall_13441:HG3_PB_pbsv_9283:HG2_Ill_Krunchall_13184:HG4_PB_assemblyticsfalcon_26048:HG3_PB_assemblyticsfalcon_26516:HG2_PB_pbsv_9532:HG2_Ill_breakscan11_1378:HG4_PB_pbsv_9551:HG4_PB_SVrefine2Falcon1Dovetail_5828:HG4_Ill_MetaSV_5340:HG4_Ill_GATKHCSBGrefine_6599:HG3_PB_SVrefine2PBcRDovetail_4319:HG3_PB_SVrefine2Falcon1Dovetail_5796:HG3_Ill_SVrefine2DISCOVARDovetail_7042:HG3_Ill_MetaSV_5284:HG3_Ill_GATKHCSBGrefine_6382:HG2_PB_SVrefine2PBcRplusDovetail_11068:HG2_PB_SVrefine2PB10Xhap12_6945:HG2_Ill_SpiralSDKrefine_17012:HG2_Ill_MetaSV_5110:HG2_Ill_GATKHCSBGrefine_6481:HG2_10X_SVrefine210Xhap12_6778:HG3_PB_HySA_14252;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6778:HG2_Ill_GATKHCSBGrefine_6481:HG2_Ill_MetaSV_5110:HG2_Ill_SpiralSDKrefine_17012:HG2_PB_SVrefine2PB10Xhap12_6945:HG2_PB_SVrefine2PBcRplusDovetail_11068:HG3_Ill_GATKHCSBGrefine_6382:HG3_Ill_MetaSV_5284:HG3_Ill_SVrefine2DISCOVARDovetail_7042:HG3_PB_SVrefine2Falcon1Dovetail_5796:HG3_PB_SVrefine2PBcRDovetail_4319:HG4_Ill_GATKHCSBGrefine_6599:HG4_Ill_MetaSV_5340:HG4_PB_SVrefine2Falcon1Dovetail_5828:HG4_PB_pbsv_9551;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00330306;ClusterMaxSizeDiff=0.00330306;ClusterMaxEditDist=0.00330306;PBcalls=11;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-6058;DistBack=15582;DistForward=-6054;DistMin=-6054;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=8:73787766-73793833;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3981.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:41:0|1:33:2:0:27:./.:0:0:0:0:0/1:33:18:0/1:403:214:6083:.:.
chr8	74061311	HG2_PB_SVrefine2PBcRplusDovetail_11071	TGTAACAAACCTACACATGTACCCCCTAAATCTACAATCAAATGTAATGGTAACAAACCTACTCATGTACCCCCTAAATCTGCAATCAAATATAATGGTAACAAACCTACTCATGTACCCCCTAAATCTACAATCAAATATAATGGTAACAAACCTACTCATGTACCCCCTAAATCTACAATCAAATATAATGGTAACAAACCTACACATGTACCCCCTAAATCTACAATCATATATAATGATAACAAACCTACACATGTACCCCCTAAATCTACAATCAAATATAATGGTAACAAACCTACACATGTACCCCCTAAATCTACAATCAAATATAATGATAACAAACCTACACATGTACCCCCTAAATCTACAATCAAATATGATGGTAACAAACCTACACATGTACCCCCTAAATCTACAATCAAATATGATGGTAACAAACCTACACATGTACCCCCTAAATCTACAATCAAATATAATGGTAACAAACCTACTCGTGTACCCCCTAAATCTACAATCAAATATAATGGTAACAAACCTACACATGTACCCCCTAAATCTACAATCAAATATAATG	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4322:HG4_PB_SVrefine2PBcRDovetail_4742:HG3_PB_assemblyticsfalcon_26521:HG3_PB_SVrefine2Falcon1Dovetail_5800:HG2_Ill_MetaSV_5113:HG2_PB_pbsv_9535:HG4_PB_pbsv_9556:HG3_PB_pbsv_9286:HG2_10X_SVrefine210Xhap12_6781:HG4_Ill_SVrefine2DISCOVARDovetail_6840:HG3_Ill_SVrefine2DISCOVARDovetail_7046:HG2_PB_SVrefine2PBcRplusDovetail_11071:HG2_PB_SVrefine2PB10Xhap12_6948:HG2_PB_SVrefine2Falcon1plusDovetail_11867:HG2_Ill_SVrefine2DISCOVARplusDovetail_12969;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12969:HG2_PB_SVrefine2Falcon1plusDovetail_11867:HG2_PB_SVrefine2PB10Xhap12_6948:HG2_PB_SVrefine2PBcRplusDovetail_11071:HG3_Ill_SVrefine2DISCOVARDovetail_7046:HG4_Ill_SVrefine2DISCOVARDovetail_6840;NumExactMatchSVs=6;ClusterMaxShiftDist=0.326299;ClusterMaxSizeDiff=0.326299;ClusterMaxEditDist=0.332792;PBcalls=10;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-576;DistBack=17163;DistForward=-555;DistMin=-555;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=488;REFWIDENED=8:74061312-74062375;PctSeqSimilarity=0.9786;PctSizeSimilarity=0.9983;PctRecOverlap=0.636;SizeDiff=1;StartDistance=-210;EndDistance=-209;GTMatch=0;TruScore=87;MatchId=3982.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:4:19:0:12:./.:0:0:0:0:0/1:3:15:0/1:6:11:.:.:.
chr8	74607596	HG2_Ill_GATKHC_15389	GCCAGAAAGGAACCCACTGCCTTGAAGGTAAGGACTCAATCCTGGCAGGATTCATTACCTGCTGACCAAAGAACCAATGGGTCCTGAA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_9289:HG3_PB_HySA_14258:HG4_PB_assemblyticsfalcon_26057:HG4_PB_SVrefine2Falcon1Dovetail_5833:HG4_Ill_svaba_12055:HG4_Ill_scalpel_8864:HG4_Ill_manta_2335:HG4_Ill_Krunchall_13450:HG4_Ill_GATKHC_15448:HG4_Ill_GATKHCSBGrefine_6605:HG4_Ill_250bpfermikitraw_12808:HG4_CG_vcfBeta_6132:HG4_10X_allpass_1847:HG3_PB_assemblyticsfalcon_26526:HG3_PB_SVrefine2Falcon1Dovetail_5802:HG3_Ill_svaba_12072:HG3_Ill_scalpel_9221:HG3_Ill_manta_2220:HG3_Ill_Krunchall_12860:HG3_Ill_GATKHC_15351:HG3_Ill_GATKHCSBGrefine_6387:HG3_Ill_250bpfermikitraw_12506:HG3_Ill_150bpfermikitraw_12137:HG3_CG_vcfBeta_5189:HG3_10X_allpass_1897:HG2_Ill_svaba_11957:HG2_Ill_scalpel_9100:HG2_Ill_breakscan11_1379:HG2_Ill_SpiralSDKrefine_17019:HG2_Ill_Krunchall_13194:HG2_Ill_GATKHC_15389:HG2_Ill_GATKHCSBGrefine_6486:HG2_Ill_250bpfermikitraw_12877:HG2_CG_vcfBeta_5447:HG2_10X_allpass_1593:HG2_10X_SVrefine210Xhap12_6784:HG4_Ill_Spiral_778:HG3_Ill_Spiral_10040:HG2_Ill_Spiral_670:HG2_PB_pbsv_9539:HG4_PB_pbsv_9561;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6784:HG2_10X_allpass_1593:HG2_CG_vcfBeta_5447:HG2_Ill_250bpfermikitraw_12877:HG2_Ill_GATKHCSBGrefine_6486:HG2_Ill_GATKHC_15389:HG2_Ill_Krunchall_13194:HG2_Ill_SpiralSDKrefine_17019:HG2_Ill_breakscan11_1379:HG2_Ill_scalpel_9100:HG2_Ill_svaba_11957:HG3_10X_allpass_1897:HG3_CG_vcfBeta_5189:HG3_Ill_150bpfermikitraw_12137:HG3_Ill_250bpfermikitraw_12506:HG3_Ill_GATKHCSBGrefine_6387:HG3_Ill_GATKHC_15351:HG3_Ill_Krunchall_12860:HG3_Ill_manta_2220:HG3_Ill_scalpel_9221:HG3_Ill_svaba_12072:HG3_PB_SVrefine2Falcon1Dovetail_5802:HG3_PB_assemblyticsfalcon_26526:HG4_10X_allpass_1847:HG4_CG_vcfBeta_6132:HG4_Ill_250bpfermikitraw_12808:HG4_Ill_GATKHCSBGrefine_6605:HG4_Ill_GATKHC_15448:HG4_Ill_Krunchall_13450:HG4_Ill_manta_2335:HG4_Ill_scalpel_8864:HG4_Ill_svaba_12055:HG4_PB_SVrefine2Falcon1Dovetail_5833:HG4_PB_assemblyticsfalcon_26057;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0342857;ClusterMaxSizeDiff=0.0342857;ClusterMaxEditDist=0.114286;PBcalls=8;Illcalls=26;TenXcalls=4;CGcalls=3;PBexactcalls=4;Illexactcalls=23;TenXexactcalls=4;CGexactcalls=3;HG2count=13;HG3count=15;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-87;DistBack=-20;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:74607597-74607683;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3983.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:28:0|1:45:1:1:23:./.:0:0:0:0:0/1:32:14:./.:.:.:.:.:.
chr8	74632717	HG4_Ill_SVrefine2DISCOVARDovetail_6845	TTAGTTTAAAATACTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCTTGTTAACCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_PB_HySA_14260:HG2_PB_HySA_17141:HG4_Ill_Krunchall_13451:HG2_PB_SVrefine2PB10Xhap12_6953:HG2_PB_assemblyticsPBcR_25834:HG4_PB_assemblyticsfalcon_26058:HG2_PB_assemblyticsfalcon_26624:HG2_PB_pbsv_9540:HG3_PB_pbsv_9290:HG4_PB_pbsv_9562:HG4_PB_SVrefine2PBcRDovetail_4745:HG4_PB_SVrefine2Falcon1Dovetail_5834:HG4_Ill_scalpel_8865:HG4_Ill_manta_2336:HG4_Ill_SVrefine2DISCOVARDovetail_6845:HG4_Ill_MetaSV_5343:HG4_Ill_GATKHCSBGrefine_6606:HG4_10X_allpass_1848:HG3_PB_assemblyticsfalcon_26527:HG3_PB_SVrefine2PBcRDovetail_4323:HG3_Ill_scalpel_9222:HG3_Ill_MetaSV_5287:HG3_Ill_GATKHCSBGrefine_6388:HG3_10X_allpass_1898:HG2_PB_SVrefine2PBcRplusDovetail_11074:HG2_PB_SVrefine2PB10Xhap12_6952:HG2_PB_SVrefine2Falcon1plusDovetail_11869:HG2_Ill_scalpel_9101:HG2_Ill_manta_2722:HG2_Ill_breakscan11_1380:HG2_Ill_GATKHCSBGrefine_6487:HG2_10X_SVrefine210Xhap12_6785:HG4_Ill_Spiral_779:HG3_Ill_Spiral_10041;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6785:HG2_Ill_GATKHCSBGrefine_6487:HG2_Ill_breakscan11_1380:HG2_Ill_manta_2722:HG2_Ill_scalpel_9101:HG2_PB_SVrefine2Falcon1plusDovetail_11869:HG2_PB_SVrefine2PB10Xhap12_6952:HG2_PB_SVrefine2PBcRplusDovetail_11074:HG3_10X_allpass_1898:HG3_Ill_GATKHCSBGrefine_6388:HG3_Ill_MetaSV_5287:HG3_Ill_scalpel_9222:HG3_PB_SVrefine2PBcRDovetail_4323:HG3_PB_assemblyticsfalcon_26527:HG4_10X_allpass_1848:HG4_Ill_GATKHCSBGrefine_6606:HG4_Ill_MetaSV_5343:HG4_Ill_SVrefine2DISCOVARDovetail_6845:HG4_Ill_manta_2336:HG4_Ill_scalpel_8865:HG4_PB_SVrefine2Falcon1Dovetail_5834:HG4_PB_SVrefine2PBcRDovetail_4745;NumExactMatchSVs=22;ClusterMaxShiftDist=0.143511;ClusterMaxSizeDiff=0.143511;ClusterMaxEditDist=0.143511;PBcalls=16;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=202;DistForward=-330;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=8:74632718-74633064;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3984.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:0|1:20:0:0:27:./.:0:0:0:0:0/1:29:9:0/1:15:5:.:.:.
chr8	74787761	HG3_Ill_manta_2221	TGTATAATATGGCATTTTAAAAAAAATACAGTTCCTCTTAGAGCTTAAGTAACTTCAGCAGCAGCAGCAACATCCTGGTGTGGGTTAGATAAATCTAC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_9563:HG2_PB_SVrefine2PBcRplusDovetail_11075:HG2_PB_assemblyticsPBcR_25836:HG4_PB_SVrefine2PBcRDovetail_4746:HG4_Ill_svaba_12059:HG4_Ill_manta_2337:HG4_Ill_Krunchall_13455:HG4_Ill_GATKHC_15452:HG4_Ill_GATKHCSBGrefine_6607:HG4_Ill_250bpfermikitraw_12811:HG4_Ill_150bpfermikitraw_12276:HG4_CG_vcfBeta_6135:HG4_10X_allpass_1849:HG3_PB_assemblyticsfalcon_26530:HG3_PB_SVrefine2Falcon1Dovetail_5803:HG3_PB_HySA_14264:HG3_Ill_svaba_12077:HG3_Ill_manta_2221:HG3_Ill_Krunchall_12864:HG3_Ill_GATKHC_15356:HG3_Ill_GATKHCSBGrefine_6389:HG3_Ill_250bpfermikitraw_12510:HG3_Ill_150bpfermikitraw_12141:HG3_CG_vcfBeta_5191:HG3_10X_allpass_1899:HG2_PB_pbsv_9541:HG2_PB_assemblyticsfalcon_26626:HG2_PB_SVrefine2Falcon1plusDovetail_11870:HG2_Ill_svaba_11961:HG2_Ill_manta_2723:HG2_Ill_SpiralSDKrefine_17022:HG2_Ill_SVrefine2DISCOVARplusDovetail_12972:HG2_Ill_Krunchall_13198:HG2_Ill_GATKHC_15393:HG2_Ill_GATKHCSBGrefine_6488:HG2_Ill_250bpfermikitraw_12881:HG2_Ill_150bpfermikitraw_12103:HG2_CG_vcfBeta_5449:HG2_10X_SVrefine210Xhap12_6786:HG3_PB_pbsv_9291;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6786:HG2_CG_vcfBeta_5449:HG2_Ill_150bpfermikitraw_12103:HG2_Ill_250bpfermikitraw_12881:HG2_Ill_GATKHCSBGrefine_6488:HG2_Ill_GATKHC_15393:HG2_Ill_Krunchall_13198:HG2_Ill_SVrefine2DISCOVARplusDovetail_12972:HG2_Ill_SpiralSDKrefine_17022:HG2_Ill_manta_2723:HG2_Ill_svaba_11961:HG2_PB_SVrefine2Falcon1plusDovetail_11870:HG2_PB_assemblyticsfalcon_26626:HG2_PB_pbsv_9541:HG3_10X_allpass_1899:HG3_CG_vcfBeta_5191:HG3_Ill_150bpfermikitraw_12141:HG3_Ill_250bpfermikitraw_12510:HG3_Ill_GATKHCSBGrefine_6389:HG3_Ill_GATKHC_15356:HG3_Ill_Krunchall_12864:HG3_Ill_manta_2221:HG3_Ill_svaba_12077:HG3_PB_HySA_14264:HG3_PB_SVrefine2Falcon1Dovetail_5803:HG3_PB_assemblyticsfalcon_26530:HG4_10X_allpass_1849:HG4_CG_vcfBeta_6135:HG4_Ill_150bpfermikitraw_12276:HG4_Ill_250bpfermikitraw_12811:HG4_Ill_GATKHCSBGrefine_6607:HG4_Ill_GATKHC_15452:HG4_Ill_Krunchall_13455:HG4_Ill_manta_2337:HG4_Ill_svaba_12059:HG4_PB_SVrefine2PBcRDovetail_4746;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0736842;ClusterMaxSizeDiff=0.0736842;ClusterMaxEditDist=0.125;PBcalls=11;Illcalls=23;TenXcalls=3;CGcalls=3;PBexactcalls=7;Illexactcalls=23;TenXexactcalls=3;CGexactcalls=3;HG2count=16;HG3count=13;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-97;DistBack=10345;DistForward=5860;DistMin=5860;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:74787762-74787858;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3985.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:21:0|1:36:0:1:24:./.:0:0:0:0:0/1:36:39:./.:.:.:.:.:.
chr8	74811928	HG2_PB_SVrefine2PBcRplusDovetail_11076	TAACACAAGGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGTGGGCACCAGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6787:HG4_Ill_GATKHC_15453:HG4_Ill_GATKHCSBGrefine_6608:HG3_Ill_GATKHCSBGrefine_6390:HG2_Ill_GATKHC_15394:HG2_Ill_GATKHCSBGrefine_6489:HG4_Ill_Krunchall_13456:HG4_PB_SVrefine2Falcon1Dovetail_5835:HG3_PB_SVrefine2Falcon1Dovetail_5804:HG3_Ill_manta_2222:HG2_PB_assemblyticsfalcon_26627:HG2_PB_SVrefine2Falcon1plusDovetail_11871:HG2_Ill_manta_2724:HG4_PB_pbsv_9564:HG3_PB_pbsv_9292:HG2_PB_pbsv_9542:HG4_PB_HySA_13839:HG2_PB_HySA_17142:HG4_PB_assemblyticsfalcon_26062:HG3_PB_assemblyticsfalcon_26531:HG4_PB_SVrefine2PBcRDovetail_4747:HG4_Ill_SVrefine2DISCOVARDovetail_6852:HG3_PB_SVrefine2PBcRDovetail_4324:HG3_Ill_SVrefine2DISCOVARDovetail_7051:HG2_PB_SVrefine2PBcRplusDovetail_11076:HG2_PB_SVrefine2PB10Xhap12_6954;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6787:HG4_PB_SVrefine2PBcRDovetail_4747:HG4_Ill_SVrefine2DISCOVARDovetail_6852:HG3_PB_SVrefine2PBcRDovetail_4324:HG3_Ill_SVrefine2DISCOVARDovetail_7051:HG2_PB_SVrefine2PBcRplusDovetail_11076:HG2_PB_SVrefine2PB10Xhap12_6954;NumExactMatchSVs=7;ClusterMaxShiftDist=0.146341;ClusterMaxSizeDiff=0.146341;ClusterMaxEditDist=0.158416;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-108;DistBack=18141;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=116;REFWIDENED=8:74811929-74812152;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0.9358;SizeDiff=0;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=97;MatchId=3986.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:2:26:0:23:./.:0:0:0:0:0/1:6:32:./.:.:.:.:.:.
chr8	75503543	HG3_Ill_SVrefine2DISCOVARDovetail_7054	AATATTTATATATTATATATATAAATATTACATATATTATATATTATATATATAAATATTACATATATTATATATTATATATATAAATATTACATATATTATATATTATATATATAAATATTAC	A	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_7054:HG3_PB_SVrefine2PBcRDovetail_4327:HG4_PB_assemblyticsfalcon_26070:HG4_PB_SVrefine2Falcon1Dovetail_5839:HG3_PB_pbsv_9295:HG2_PB_pbsv_9545:HG3_PB_SVrefine2Falcon1Dovetail_5808;NumClusterSVs=7;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_7054:HG3_PB_SVrefine2Falcon1Dovetail_5808;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0239044;ClusterMaxSizeDiff=0.0239044;ClusterMaxEditDist=0.0239044;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-123;DistBack=-93;DistForward=-120;DistMin=-120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=323;REFWIDENED=8:75503544-75503989;PctSeqSimilarity=0.986;PctSizeSimilarity=0.9762;PctRecOverlap=0.1496;SizeDiff=-3;StartDistance=-105;EndDistance=-108;GTMatch=0;TruScore=70;MatchId=3987.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:28:0|1:39:3:4:26:./.:0:0:0:0:0/0:25:0:./.:.:.:.:.:.
chr8	75871117	HG2_Ill_250bpfermikitraw_12888	CATATATATATATACACGTTAATGGCAAATGTTAATATATGGTGCTGCAATAAT	C	20	PASS	ClusterIDs=HG2_PB_HySA_17150:HG3_PB_HySA_14273:HG2_PB_pbsv_9546:HG3_PB_pbsv_9298:HG3_PB_SVrefine2Falcon1Dovetail_5810:HG3_Ill_svaba_12085:HG3_Ill_manta_2223:HG3_Ill_Krunchall_12876:HG3_Ill_GATKHCSBGrefine_6401:HG3_Ill_250bpfermikitraw_12521:HG3_Ill_150bpfermikitraw_12149:HG3_10X_allpass_1901:HG2_Ill_svaba_11965:HG2_Ill_manta_2725:HG2_Ill_SpiralSDKrefine_17028:HG2_Ill_Krunchall_13208:HG2_Ill_GATKHC_15402:HG2_Ill_GATKHCSBGrefine_6499:HG2_Ill_250bpfermikitraw_12888:HG2_Ill_150bpfermikitraw_12109:HG2_Ill_Spiral_671;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12109:HG2_Ill_250bpfermikitraw_12888:HG2_Ill_GATKHCSBGrefine_6499:HG2_Ill_GATKHC_15402:HG2_Ill_Krunchall_13208:HG2_Ill_SpiralSDKrefine_17028:HG2_Ill_manta_2725:HG2_Ill_svaba_11965:HG3_10X_allpass_1901:HG3_Ill_150bpfermikitraw_12149:HG3_Ill_250bpfermikitraw_12521:HG3_Ill_GATKHCSBGrefine_6401:HG3_Ill_Krunchall_12876:HG3_Ill_manta_2223:HG3_Ill_svaba_12085:HG3_PB_SVrefine2Falcon1Dovetail_5810;NumExactMatchSVs=16;ClusterMaxShiftDist=0.107143;ClusterMaxSizeDiff=0.107143;ClusterMaxEditDist=0.107143;PBcalls=5;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-53;DistBack=17005;DistForward=5767;DistMin=5767;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=51;REFWIDENED=8:75871118-75871221;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3988.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:24:0|1:34:3:6:19:./.:0:0:0:0:0/1:37:13:./.:.:.:.:.:.
chr8	75876938	HG2_10X_SVrefine210Xhap12_6793	TTCTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1086:HG4_PB_assemblyticsfalcon_26073:HG2_PB_assemblyticsfalcon_26632:HG2_PB_assemblyticsPBcR_25845:HG4_Ill_Krunchall_13468:HG3_Ill_Krunchall_12877:HG2_Ill_Krunchall_13209:HG4_Ill_Spiral_780:HG3_PB_pbsv_9299:HG4_PB_pbsv_9570:HG4_PB_SVrefine2PBcRDovetail_4751:HG4_PB_SVrefine2Falcon1Dovetail_5840:HG4_Ill_scalpel_8873:HG4_Ill_manta_2338:HG4_Ill_SVrefine2DISCOVARDovetail_6856:HG4_Ill_GATKHCSBGrefine_6621:HG4_10X_allpass_1852:HG3_PB_SVrefine2PBcRDovetail_4328:HG3_PB_SVrefine2Falcon1Dovetail_5811:HG3_Ill_scalpel_9228:HG3_Ill_manta_2224:HG3_Ill_GATKHCSBGrefine_6402:HG3_10X_allpass_1902:HG2_PB_pbsv_9547:HG2_PB_SVrefine2PBcRplusDovetail_11079:HG2_PB_SVrefine2PB10Xhap12_6957:HG2_PB_SVrefine2Falcon1plusDovetail_11874:HG2_Ill_scalpel_9106:HG2_Ill_manta_2726:HG2_Ill_SVrefine2DISCOVARplusDovetail_12977:HG2_Ill_MetaSV_5118:HG2_Ill_GATKHCSBGrefine_6500:HG2_10X_allpass_1595:HG2_10X_SVrefine210Xhap12_6793:HG4_Ill_MetaSV_5345:HG3_Ill_MetaSV_5290;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6793:HG2_10X_allpass_1595:HG2_Ill_GATKHCSBGrefine_6500:HG2_Ill_MetaSV_5118:HG2_Ill_SVrefine2DISCOVARplusDovetail_12977:HG2_Ill_manta_2726:HG2_Ill_scalpel_9106:HG2_PB_SVrefine2Falcon1plusDovetail_11874:HG2_PB_SVrefine2PB10Xhap12_6957:HG2_PB_SVrefine2PBcRplusDovetail_11079:HG2_PB_pbsv_9547:HG3_10X_allpass_1902:HG3_Ill_GATKHCSBGrefine_6402:HG3_Ill_manta_2224:HG3_Ill_scalpel_9228:HG3_PB_SVrefine2Falcon1Dovetail_5811:HG3_PB_SVrefine2PBcRDovetail_4328:HG4_10X_allpass_1852:HG4_Ill_GATKHCSBGrefine_6621:HG4_Ill_SVrefine2DISCOVARDovetail_6856:HG4_Ill_manta_2338:HG4_Ill_scalpel_8873:HG4_PB_SVrefine2Falcon1Dovetail_5840:HG4_PB_SVrefine2PBcRDovetail_4751:HG4_PB_pbsv_9570;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0590062;ClusterMaxSizeDiff=0.0590062;ClusterMaxEditDist=0.0590062;PBcalls=13;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=5767;DistForward=10409;DistMin=5767;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=8:75876939-75877274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3989.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:1/1:4:32:0:18:./.:0:0:0:0:1/1:0:44:0/1:1:8:.:.:.
chr8	75942965	HG2_Ill_svaba_11968	GTATATATGTATGAGTGTGTGTATATATGTGTGTATATGTATATGTGTGTGACTGTA	G	20	PASS	ClusterIDs=HG2_Ill_scalpel_9108:HG3_Ill_svaba_12087:HG3_Ill_scalpel_9229:HG3_Ill_manta_2225:HG3_Ill_Krunchall_12879:HG3_Ill_GATKHC_15370:HG3_Ill_GATKHCSBGrefine_6403:HG3_Ill_250bpfermikitraw_12523:HG3_Ill_150bpfermikitraw_12151:HG2_Ill_svaba_11968:HG2_Ill_scalpel_9109:HG2_Ill_manta_2727:HG2_Ill_SpiralSDKrefine_17031:HG2_Ill_Krunchall_13212:HG2_Ill_GATKHC_15405:HG2_Ill_GATKHCSBGrefine_6501:HG2_Ill_250bpfermikitraw_12891:HG2_Ill_150bpfermikitraw_12112:HG2_PB_pbsv_9548:HG3_PB_pbsv_9300;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12112:HG2_Ill_250bpfermikitraw_12891:HG2_Ill_GATKHCSBGrefine_6501:HG2_Ill_GATKHC_15405:HG2_Ill_Krunchall_13212:HG2_Ill_SpiralSDKrefine_17031:HG2_Ill_manta_2727:HG2_Ill_scalpel_9109:HG2_Ill_svaba_11968:HG3_Ill_150bpfermikitraw_12151:HG3_Ill_250bpfermikitraw_12523:HG3_Ill_GATKHCSBGrefine_6403:HG3_Ill_GATKHC_15370:HG3_Ill_Krunchall_12879:HG3_Ill_manta_2225:HG3_Ill_scalpel_9229:HG3_Ill_svaba_12087;NumExactMatchSVs=17;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.169811;PBcalls=2;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-56;DistBack=3;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=118;REFWIDENED=8:75942911-75943084;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3990.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:38:./.:26:29:6:5:./.:0:0:0:0:0/1:27:20:./.:.:.:.:.:.
chr8	76017320	HG2_PB_assemblyticsfalcon_26636	TCTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_4329:HG3_PB_pbsv_9301:HG2_PB_assemblyticsfalcon_26636:HG2_PB_pbsv_9549:HG2_Ill_SVrefine2DISCOVARplusDovetail_12978;NumClusterSVs=5;ExactMatchIDs=HG2_PB_assemblyticsfalcon_26636;NumExactMatchSVs=1;ClusterMaxShiftDist=0.210526;ClusterMaxSizeDiff=0.210526;ClusterMaxEditDist=0.210526;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=4847;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=172;REFWIDENED=8:76017307-76017540;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.9677;PctRecOverlap=0.9524;SizeDiff=2;StartDistance=-3;EndDistance=-1;GTMatch=0;TruScore=96;MatchId=3991.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:24:1|0:6:23:30:1:./.:0:0:0:0:0/1:20:4:./.:.:.:.:.:.
chr8	76126888	HG4_Ill_GATKHCSBGrefine_6622	TTCAAACTATATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_25847:HG4_PB_assemblyticsfalcon_26076:HG2_PB_assemblyticsfalcon_26637:HG2_PB_SVrefine2Falcon1plusDovetail_11875:HG3_PB_HySA_14275:HG4_PB_pbsv_9571:HG2_Ill_Krunchall_13213:HG4_PB_HySA_13850:HG3_PB_pbsv_9302:HG2_PB_HySA_17151:HG4_PB_SVrefine2PBcRDovetail_4752:HG4_PB_SVrefine2Falcon1Dovetail_5841:HG4_Ill_scalpel_8875:HG4_Ill_manta_2339:HG4_Ill_SVrefine2DISCOVARDovetail_6857:HG4_Ill_GATKHCSBGrefine_6622:HG4_10X_allpass_1853:HG3_PB_SVrefine2PBcRDovetail_4330:HG3_Ill_manta_2226:HG3_Ill_GATKHCSBGrefine_6404:HG3_10X_allpass_1903:HG2_PB_pbsv_9550:HG2_PB_SVrefine2PB10Xhap12_6959:HG2_Ill_manta_2728:HG2_Ill_GATKHCSBGrefine_6502:HG2_10X_allpass_1596:HG2_10X_SVrefine210Xhap12_6794:HG4_Ill_MetaSV_5346:HG3_Ill_MetaSV_5291:HG2_Ill_tnscope_1087:HG2_Ill_breakscan11_1381:HG2_Ill_MetaSV_5119:HG2_PB_SVrefine2PB10Xhap12_6958:HG2_PB_SVrefine2PBcRplusDovetail_11080;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6794:HG2_10X_allpass_1596:HG2_Ill_GATKHCSBGrefine_6502:HG2_Ill_manta_2728:HG2_PB_SVrefine2PB10Xhap12_6959:HG2_PB_pbsv_9550:HG3_10X_allpass_1903:HG3_Ill_GATKHCSBGrefine_6404:HG3_Ill_manta_2226:HG3_PB_SVrefine2PBcRDovetail_4330:HG4_10X_allpass_1853:HG4_Ill_GATKHCSBGrefine_6622:HG4_Ill_SVrefine2DISCOVARDovetail_6857:HG4_Ill_manta_2339:HG4_Ill_scalpel_8875:HG4_PB_SVrefine2Falcon1Dovetail_5841:HG4_PB_SVrefine2PBcRDovetail_4752;NumExactMatchSVs=17;ClusterMaxShiftDist=0.17704;ClusterMaxSizeDiff=0.17704;ClusterMaxEditDist=0.26556;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=109322;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:76126889-76127226;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3992.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:36:0|1:28:4:0:31:./.:0:0:0:0:0/1:26:26:0/1:26:6:.:.:.
chr8	76138134	HG3_Ill_250bpfermikitraw_12525	ATTCCCGTTGTTACATCATTTTGCAAGTTCCTCAACAATAACTGAGATACACTTTTCT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_9551:HG4_PB_pbsv_9572:HG2_PB_HySA_17152:HG4_Ill_svaba_12072:HG4_Ill_scalpel_8876:HG4_Ill_manta_2340:HG4_Ill_Krunchall_13470:HG4_Ill_GATKHC_15466:HG4_Ill_GATKHCSBGrefine_6623:HG4_Ill_Cortex_3673:HG4_Ill_250bpfermikitraw_12823:HG4_Ill_150bpfermikitraw_12287:HG4_CG_vcfBeta_6145:HG3_PB_assemblyticsfalcon_26541:HG3_Ill_svaba_12091:HG3_Ill_scalpel_9231:HG3_Ill_manta_2227:HG3_Ill_Krunchall_12881:HG3_Ill_GATKHC_15372:HG3_Ill_GATKHCSBGrefine_6405:HG3_Ill_Cortex_3699:HG3_Ill_250bpfermikitraw_12525:HG3_Ill_150bpfermikitraw_12153:HG3_CG_vcfBeta_5196:HG2_PB_assemblyticsfalcon_26638:HG2_Ill_svaba_11970:HG2_Ill_manta_2729:HG2_Ill_breakscan11_1382:HG2_Ill_SpiralSDKrefine_17032:HG2_Ill_Krunchall_13214:HG2_Ill_GATKHC_15407:HG2_Ill_GATKHCSBGrefine_6503:HG2_Ill_Cortex_8924:HG2_Ill_250bpfermikitraw_12892:HG2_Ill_150bpfermikitraw_12113:HG2_CG_vcfBeta_5455:HG4_PB_assemblyticsfalcon_26077:HG2_PB_assemblyticsPBcR_25848;NumClusterSVs=38;ExactMatchIDs=HG2_CG_vcfBeta_5455:HG2_Ill_150bpfermikitraw_12113:HG2_Ill_250bpfermikitraw_12892:HG2_Ill_Cortex_8924:HG2_Ill_GATKHCSBGrefine_6503:HG2_Ill_GATKHC_15407:HG2_Ill_Krunchall_13214:HG2_Ill_SpiralSDKrefine_17032:HG2_Ill_breakscan11_1382:HG2_Ill_manta_2729:HG2_Ill_svaba_11970:HG2_PB_assemblyticsfalcon_26638:HG3_CG_vcfBeta_5196:HG3_Ill_150bpfermikitraw_12153:HG3_Ill_250bpfermikitraw_12525:HG3_Ill_Cortex_3699:HG3_Ill_GATKHCSBGrefine_6405:HG3_Ill_GATKHC_15372:HG3_Ill_Krunchall_12881:HG3_Ill_manta_2227:HG3_Ill_scalpel_9231:HG3_Ill_svaba_12091:HG3_PB_assemblyticsfalcon_26541:HG4_CG_vcfBeta_6145:HG4_Ill_150bpfermikitraw_12287:HG4_Ill_250bpfermikitraw_12823:HG4_Ill_Cortex_3673:HG4_Ill_GATKHCSBGrefine_6623:HG4_Ill_GATKHC_15466:HG4_Ill_Krunchall_13470:HG4_Ill_manta_2340:HG4_Ill_scalpel_8876:HG4_Ill_svaba_12072;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0521739;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.0526316;PBcalls=7;Illcalls=28;TenXcalls=0;CGcalls=3;PBexactcalls=2;Illexactcalls=28;TenXexactcalls=0;CGexactcalls=3;HG2count=15;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=6999;DistForward=-46;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:76138133-76138192;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3993.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:0|1:24:0:3:28:./.:0:0:0:0:0/1:35:26:./.:.:.:.:.:.
chr8	76414046	HG3_10X_allpass_1904	TATCTCACATAATTATCTTTTTTTCATGATGAGAATACCTAAAGTATTTTTTTTTTTTTTGAGATGGAGTCTCTCTTTGTTGCCCAGGCTGGAGTGCAGTGGCGCA	T	20	PASS	ClusterIDs=HG3_PB_HySA_14278:HG2_PB_SVrefine2PB10Xhap12_6961:HG3_PB_assemblyticsfalcon_26545:HG2_PB_assemblyticsfalcon_26641:HG3_Ill_Krunchall_12883:HG2_PB_HySA_17156:HG3_PB_pbsv_9304:HG3_PB_SVrefine2PBcRDovetail_4331:HG3_PB_SVrefine2Falcon1Dovetail_5812:HG3_Ill_svaba_12092:HG3_Ill_SVrefine2DISCOVARDovetail_7056:HG3_Ill_MetaSV_5292:HG3_Ill_GATKHC_15374:HG3_Ill_GATKHCSBGrefine_6406:HG3_CG_vcfBeta_5197:HG3_10X_allpass_1904:HG2_PB_SVrefine2PB10Xhap12_6960:HG2_PB_SVrefine2Falcon1plusDovetail_11876:HG2_Ill_svaba_11972:HG2_Ill_scalpel_9113:HG2_Ill_SpiralSDKrefine_17035:HG2_Ill_SVrefine2DISCOVARplusDovetail_12979:HG2_Ill_MetaSV_5120:HG2_Ill_GATKHC_15413:HG2_Ill_GATKHCSBGrefine_6505:HG2_CG_vcfBeta_5457:HG2_10X_allpass_1597:HG2_10X_SVrefine210Xhap12_6795:HG2_PB_pbsv_9552:HG3_Ill_Spiral_10057:HG2_Ill_Spiral_672;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6795:HG2_10X_allpass_1597:HG2_CG_vcfBeta_5457:HG2_Ill_GATKHCSBGrefine_6505:HG2_Ill_GATKHC_15413:HG2_Ill_MetaSV_5120:HG2_Ill_SVrefine2DISCOVARplusDovetail_12979:HG2_Ill_SpiralSDKrefine_17035:HG2_Ill_scalpel_9113:HG2_Ill_svaba_11972:HG2_PB_SVrefine2Falcon1plusDovetail_11876:HG2_PB_SVrefine2PB10Xhap12_6960:HG3_10X_allpass_1904:HG3_CG_vcfBeta_5197:HG3_Ill_GATKHCSBGrefine_6406:HG3_Ill_GATKHC_15374:HG3_Ill_MetaSV_5292:HG3_Ill_SVrefine2DISCOVARDovetail_7056:HG3_Ill_svaba_12092:HG3_PB_SVrefine2Falcon1Dovetail_5812:HG3_PB_SVrefine2PBcRDovetail_4331:HG3_PB_pbsv_9304;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0865385;ClusterMaxSizeDiff=0.0865385;ClusterMaxEditDist=0.0886699;PBcalls=11;Illcalls=15;TenXcalls=3;CGcalls=2;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=2;HG2count=17;HG3count=14;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-105;DistBack=4737;DistForward=-90;DistMin=-90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=8:76414047-76414156;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3994.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:0|1:28:2:3:32:./.:0:0:0:0:0/1:36:23:./.:.:.:.:.:.
chr8	76615062	HG3_Ill_SVrefine2DISCOVARDovetail_7058	TGTTCATCATACATTAAGCCTGACTCATTTACAATAATATGCAATACTTTGGGAAGTTATCTATAGTTGCAGTA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6796:HG2_PB_pbsv_9553:HG3_PB_pbsv_9305:HG3_PB_SVrefine2PBcRDovetail_4332:HG3_Ill_svaba_12093:HG3_Ill_SVrefine2DISCOVARDovetail_7058:HG3_Ill_Krunchall_12885:HG3_Ill_GATKHCSBGrefine_6407:HG3_Ill_250bpfermikitraw_12526:HG2_PB_SVrefine2PB10Xhap12_6962:HG2_Ill_svaba_11973:HG2_Ill_manta_2730:HG2_Ill_SpiralSDKrefine_17036:HG2_Ill_GATKHCSBGrefine_6506:HG2_Ill_250bpfermikitraw_12896;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6796:HG3_PB_SVrefine2PBcRDovetail_4332:HG3_Ill_svaba_12093:HG3_Ill_SVrefine2DISCOVARDovetail_7058:HG3_Ill_Krunchall_12885:HG3_Ill_GATKHCSBGrefine_6407:HG3_Ill_250bpfermikitraw_12526:HG2_PB_SVrefine2PB10Xhap12_6962:HG2_Ill_svaba_11973:HG2_Ill_manta_2730:HG2_Ill_SpiralSDKrefine_17036:HG2_Ill_GATKHCSBGrefine_6506:HG2_Ill_250bpfermikitraw_12896;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0136986;ClusterMaxSizeDiff=0.0136054;ClusterMaxEditDist=0.0273973;PBcalls=4;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-73;DistBack=47723;DistForward=28465;DistMin=28465;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=8:76615063-76615210;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3995.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:35:0|1:50:3:2:30:./.:0:0:0:0:0/1:24:13:./.:.:.:.:.:.
chr8	77337381	HG2_PB_pbsv_9556	GTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTTCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAAATGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCT	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1383:HG4_PB_assemblyticsfalcon_26087:HG2_10X_allpass_1598:HG3_PB_assemblyticsfalcon_26553:HG2_PB_assemblyticsfalcon_26649:HG2_Ill_tnscope_1088:HG4_PB_SVrefine2Falcon1Dovetail_5844:HG4_Ill_MetaSV_5348:HG4_Ill_GATKHCSBGrefine_6626:HG3_PB_SVrefine2PBcRDovetail_4338:HG3_PB_SVrefine2Falcon1Dovetail_5816:HG3_Ill_SVrefine2DISCOVARDovetail_7068:HG3_Ill_MetaSV_5294:HG3_Ill_GATKHCSBGrefine_6410:HG2_PB_pbsv_9556:HG2_PB_SVrefine2PB10Xhap12_6967:HG2_PB_SVrefine2Falcon1plusDovetail_11879:HG2_Ill_MetaSV_5123:HG2_Ill_GATKHCSBGrefine_6509:HG2_10X_SVrefine210Xhap12_6801:HG4_PB_pbsv_9576:HG4_Ill_Krunchall_13478:HG3_PB_pbsv_9308:HG3_Ill_Krunchall_12895:HG2_Ill_Krunchall_13224:HG3_10X_allpass_1906;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6801:HG2_Ill_GATKHCSBGrefine_6509:HG2_Ill_MetaSV_5123:HG2_PB_SVrefine2Falcon1plusDovetail_11879:HG2_PB_SVrefine2PB10Xhap12_6967:HG2_PB_pbsv_9556:HG3_Ill_GATKHCSBGrefine_6410:HG3_Ill_MetaSV_5294:HG3_Ill_SVrefine2DISCOVARDovetail_7068:HG3_PB_SVrefine2Falcon1Dovetail_5816:HG3_PB_SVrefine2PBcRDovetail_4338:HG4_Ill_GATKHCSBGrefine_6626:HG4_Ill_MetaSV_5348:HG4_PB_SVrefine2Falcon1Dovetail_5844;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00863309;ClusterMaxSizeDiff=0.00863309;ClusterMaxEditDist=0.00863309;PBcalls=11;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1045;DistBack=53409;DistForward=-1044;DistMin=-1044;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=8:77337382-77338430;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3996.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:0|1:27:1:0:27:./.:0:0:0:0:0/1:38:25:0/1:91:39:1056:.:.
chr8	79079337	HG2_PB_pbsv_9562	GTCAAAATGCAAAATTAGTTGCATTTGTATACACTAATGATGAACAATTTGACAAAGAAGTAAAGAAAGCAAT	G	20	PASS	ClusterIDs=HG3_PB_pbsv_9314:HG2_PB_HySA_17169:HG4_PB_pbsv_9585:HG4_Ill_svaba_12089:HG4_Ill_manta_2345:HG4_Ill_Krunchall_13491:HG4_Ill_GATKHC_15484:HG4_Ill_GATKHCSBGrefine_6632:HG4_Ill_250bpfermikitraw_12844:HG4_Ill_150bpfermikitraw_12303:HG4_10X_allpass_1855:HG3_Ill_svaba_12108:HG3_Ill_scalpel_9243:HG3_Ill_manta_2230:HG3_Ill_Krunchall_12903:HG3_Ill_GATKHC_15398:HG3_Ill_GATKHCSBGrefine_6415:HG3_Ill_250bpfermikitraw_12547:HG3_Ill_150bpfermikitraw_12173:HG3_10X_allpass_1907:HG2_PB_pbsv_9562:HG2_Ill_svaba_11982:HG2_Ill_scalpel_9120:HG2_Ill_manta_2734:HG2_Ill_SpiralSDKrefine_17047:HG2_Ill_Krunchall_13230:HG2_Ill_GATKHC_15430:HG2_Ill_GATKHCSBGrefine_6516:HG2_Ill_250bpfermikitraw_12913:HG2_Ill_150bpfermikitraw_12132:HG2_CG_vcfBeta_5463:HG2_10X_allpass_1599;NumClusterSVs=32;ExactMatchIDs=HG2_10X_allpass_1599:HG2_CG_vcfBeta_5463:HG2_Ill_150bpfermikitraw_12132:HG2_Ill_250bpfermikitraw_12913:HG2_Ill_GATKHCSBGrefine_6516:HG2_Ill_GATKHC_15430:HG2_Ill_Krunchall_13230:HG2_Ill_SpiralSDKrefine_17047:HG2_Ill_manta_2734:HG2_Ill_scalpel_9120:HG2_Ill_svaba_11982:HG2_PB_pbsv_9562:HG3_10X_allpass_1907:HG3_Ill_150bpfermikitraw_12173:HG3_Ill_250bpfermikitraw_12547:HG3_Ill_GATKHCSBGrefine_6415:HG3_Ill_GATKHC_15398:HG3_Ill_Krunchall_12903:HG3_Ill_manta_2230:HG3_Ill_scalpel_9243:HG3_Ill_svaba_12108:HG4_10X_allpass_1855:HG4_Ill_150bpfermikitraw_12303:HG4_Ill_250bpfermikitraw_12844:HG4_Ill_GATKHCSBGrefine_6632:HG4_Ill_GATKHC_15484:HG4_Ill_Krunchall_13491:HG4_Ill_manta_2345:HG4_Ill_svaba_12089:HG4_PB_pbsv_9585;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0273973;PBcalls=4;Illcalls=24;TenXcalls=3;CGcalls=1;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=1;HG2count=13;HG3count=10;HG4count=9;NumTechs=4;NumTechsExact=4;SVLEN=-72;DistBack=184;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=8:79079338-79079411;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3997.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:1/1:0:15:3:29:./.:0:0:0:0:1/1:1:24:./.:.:.:.:.:.
chr8	79683398	HG2_PB_assemblyticsPBcR_25871	AACCTCCCAACGCAATAGACATTGTGGTTTTCATTGCATATCATTCCTATTTCTCTCTCTCCATTATTTAGCAGTAATTTTTTTAATGAA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_9564:HG3_Ill_GATKHC_15403:HG3_Ill_GATKHCSBGrefine_6417:HG2_Ill_GATKHC_15434:HG2_Ill_GATKHCSBGrefine_6518:HG2_Ill_SpiralSDKrefine_17052:HG3_Ill_manta_2231:HG3_Ill_Cortex_3702:HG3_CG_vcfBeta_5205:HG2_PB_assemblyticsfalcon_26662:HG2_PB_assemblyticsPBcR_25871:HG2_PB_SVrefine2PBcRplusDovetail_11086:HG2_PB_SVrefine2PB10Xhap12_6972:HG2_PB_SVrefine2Falcon1plusDovetail_11885:HG2_Ill_manta_2735:HG2_Ill_Cortex_8934:HG2_CG_vcfBeta_5466:HG2_10X_SVrefine210Xhap12_6807:HG2_PB_PB10Xdip_30572:HG3_Ill_Spiral_10075:HG2_Ill_Spiral_673:HG3_Ill_svaba_12112:HG3_Ill_scalpel_9245:HG3_Ill_Krunchall_12907:HG3_Ill_250bpfermikitraw_12551:HG3_Ill_150bpfermikitraw_12176:HG3_10X_allpass_1908:HG2_PB_HySA_17171:HG2_Ill_svaba_11986:HG2_Ill_breakscan11_1384:HG2_Ill_Krunchall_13233:HG2_Ill_250bpfermikitraw_12917:HG2_Ill_150bpfermikitraw_12135:HG2_10X_allpass_1600:HG3_PB_pbsv_9316;NumClusterSVs=35;ExactMatchIDs=HG2_PB_PB10Xdip_30572:HG2_10X_SVrefine210Xhap12_6807:HG2_CG_vcfBeta_5466:HG2_Ill_Cortex_8934:HG2_Ill_manta_2735:HG2_PB_SVrefine2Falcon1plusDovetail_11885:HG2_PB_SVrefine2PB10Xhap12_6972:HG2_PB_SVrefine2PBcRplusDovetail_11086:HG2_PB_assemblyticsPBcR_25871:HG2_PB_assemblyticsfalcon_26662:HG3_CG_vcfBeta_5205:HG3_Ill_Cortex_3702:HG3_Ill_manta_2231;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0335196;ClusterMaxSizeDiff=0.0335196;ClusterMaxEditDist=0.0337079;PBcalls=9;Illcalls=21;TenXcalls=3;CGcalls=2;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=2;HG2count=22;HG3count=13;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-89;DistBack=784;DistForward=52735;DistMin=784;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:79683398-79683487;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9889;PctRecOverlap=0.967;SizeDiff=-1;StartDistance=3;EndDistance=2;GTMatch=0;TruScore=98;MatchId=3998.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:23:1:2:26:./.:0:0:0:0:0/1:27:26:./.:.:.:.:.:.
chr8	79798455	HG3_Ill_GATKHC_15406	TTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTGCCTTCCTTCCTTCCCTCCCTCCCTCCTCCCTCCCACCCTCCCTTTCTTCCTTCTTCCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6808:HG2_PB_HySA_17173:HG4_Ill_GATKHC_15489:HG4_Ill_GATKHCSBGrefine_6634:HG3_PB_pbsv_9317:HG3_Ill_Krunchall_12909:HG3_Ill_GATKHC_15406:HG3_Ill_GATKHCSBGrefine_6418:HG3_Ill_250bpfermikitraw_12553:HG2_Ill_GATKHC_15437:HG2_Ill_250bpfermikitraw_12920:HG4_PB_pbsv_9588:HG2_PB_pbsv_9565:HG4_Ill_SVrefine2DISCOVARDovetail_6870:HG3_Ill_SVrefine2DISCOVARDovetail_7080:HG2_PB_SVrefine2PBcRplusDovetail_11087:HG2_PB_SVrefine2Falcon1plusDovetail_11886:HG2_Ill_SVrefine2DISCOVARplusDovetail_12997;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12920:HG2_Ill_GATKHC_15437:HG3_Ill_250bpfermikitraw_12553:HG3_Ill_GATKHCSBGrefine_6418:HG3_Ill_GATKHC_15406:HG3_Ill_Krunchall_12909:HG3_PB_pbsv_9317:HG4_Ill_GATKHCSBGrefine_6634:HG4_Ill_GATKHC_15489;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0546448;ClusterMaxSizeDiff=0.0546448;ClusterMaxEditDist=0.0874317;PBcalls=6;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-92;DistBack=-24;DistForward=17009;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=113;REFWIDENED=8:79798391-79798595;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=3999.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:45:0|1:24:1:4:44:./.:0:0:0:0:0/1:8:8:./.:.:.:.:.:.
chr8	82046204	HG4_PB_SVrefine2Falcon1Dovetail_5853	TGTACCTGTGTGGTCCAGGATTCTCCCTCCTAGTTCTCGTGTGGTACCTGTGTGGTCCAGGATTCTCCCTCCTAGTTCTCGTGTGGTACCTGTGTGGTCCAGGATTCTCCCTCCTAGTTCTCGTGTGGTACCTGTGTGGTCCAGGATTCTCCCTCCTAGTTCTCGTGTGGTACCTGTGTGGTCCAGGATTCTCCCTCCTAGTTCTCGTGTGGTACCTGTGTGGTCCAGGATTCTCCCTCCTAGTTCTCGTGTGGTACCTGTGTGGTCCAGGATTCTCCCTCCTAGTTCTCGTGTG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13005:HG4_Ill_GATKHCSBGrefine_6636:HG2_Ill_GATKHCSBGrefine_6520:HG4_PB_pbsv_9590:HG2_PB_pbsv_9568:HG2_Ill_SpiralSDKrefine_17058:HG2_10X_SVrefine210Xhap12_6814:HG3_Ill_MetaSV_5299:HG2_Ill_MetaSV_5127:HG4_PB_HySA_13873:HG4_PB_SVrefine2PBcRDovetail_4761:HG4_PB_SVrefine2Falcon1Dovetail_5853:HG4_Ill_SVrefine2DISCOVARDovetail_6877:HG2_PB_SVrefine2Falcon1plusDovetail_11889;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13005:HG4_PB_SVrefine2PBcRDovetail_4761:HG4_PB_SVrefine2Falcon1Dovetail_5853:HG4_Ill_SVrefine2DISCOVARDovetail_6877:HG2_PB_SVrefine2Falcon1plusDovetail_11889;NumExactMatchSVs=5;ClusterMaxShiftDist=0.358543;ClusterMaxSizeDiff=0.358543;ClusterMaxEditDist=0.358543;PBcalls=6;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-294;DistBack=-85;DistForward=-253;DistMin=-253;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=168;REFWIDENED=8:82046205-82046666;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4000.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:0|1:30:2:1:19:./.:0:0:0:0:./.:1:13:./.:.:.:.:.:.
chr8	83003426	HG2_PB_SVrefine2PB10Xhap12_6976	CACAGAGTGCTGATTGGTGCATTTACAATCCTTTAGCTAGACACAGAGCGCTGATTGGTGCGTTTTT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6976:HG3_PB_pbsv_9321:HG2_PB_pbsv_9571:HG3_Ill_SVrefine2DISCOVARDovetail_7091;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6976:HG3_Ill_SVrefine2DISCOVARDovetail_7091;NumExactMatchSVs=2;ClusterMaxShiftDist=0.030303;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.0606061;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=-1814;DistForward=1739;DistMin=-1814;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=372;REFWIDENED=8:83003427-83003864;PctSeqSimilarity=0.9857;PctSizeSimilarity=1;PctRecOverlap=0.7164;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=90;MatchId=4001.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:32:./.:14:10:3:4:./.:0:0:0:0:./.:31:2:./.:.:.:.:.:.
chr8	83196531	HG4_PB_SVrefine2Falcon1Dovetail_5856	TTATTTTAGGATATTGATCTTGTTATCAGTCTTCCTGAACTCATTTCTAATAATTGTCTATACATTATTTCATGTTTGTTATATAGATGATCATATGATCTAAACATAATACCCTTGTTTACATTTCTTTCCAACCTTTATGTCTCTTATTATTGTTTAATTTTTCTTATGTAACTGTATTGGATAAGACCTCAGTACAATTTGAAAACAGGTGGTCATAATCAACATTCTTGCTTTCTTTTTAAATTTAACAGAAATGCCCCTAACAAATCACTGCAAAGTATTAGGTTCTTGAGGGTGTTTGGCAAATCTTAGGTTTTCTATTATATCATACTGCTTTAAAAATTCACGCATTTATATTTATTTTAAAGAAAACAGGCAAACATTTTTGAGAGTGAGGTCATGGTGCCCTTTGGAAATCTGATGAAATACAGATTTCGTACATCAACACAAACATTTTGTGTATGATATAGGGACTCATAGATCTATTAAGTGTCCTCTATTGACTCAATGTTAAGACATCTTGATTTTAAAAAATTGTTAAAACATCCAAGAAACACTTATTAAACACCCATTACATGGGGATAACTGTAAAATTCATGATCTGTATA	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6977:HG3_PB_pbsv_9322:HG2_PB_pbsv_9572:HG4_PB_SVrefine2Falcon1Dovetail_5856:HG3_PB_SVrefine2PBcRDovetail_4344;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6977:HG4_PB_SVrefine2Falcon1Dovetail_5856:HG3_PB_SVrefine2PBcRDovetail_4344;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00492207;ClusterMaxSizeDiff=0.00492207;ClusterMaxEditDist=0.00821693;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-610;DistBack=51264;DistForward=-611;DistMin=-611;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=610;REFWIDENED=8:83196532-83197751;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4002.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:30:0|1:32:1:2:27:./.:0:0:0:0:0/0:24:0:0/1:12:8:.:.:.
chr8	85199545	HG4_Ill_Krunchall_13524	CTGGGCTAGGTTATTAGGAAGATCATTGAAATCGTCAAAATCACAAAAAGTTACAGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6822:HG3_PB_assemblyticsfalcon_26591:HG4_PB_assemblyticsfalcon_26128:HG4_Ill_Spiral_783:HG3_PB_HySA_14328:HG3_Ill_Spiral_10097:HG2_Ill_Spiral_674:HG3_PB_pbsv_9328:HG4_PB_pbsv_9598:HG2_PB_pbsv_9575:HG2_PB_HySA_17197:HG4_PB_SVrefine2PBcRDovetail_4765:HG4_Ill_svaba_12114:HG4_Ill_manta_2350:HG4_Ill_Krunchall_13524:HG4_Ill_GATKHCSBGrefine_6645:HG4_Ill_250bpfermikitraw_12873:HG4_Ill_150bpfermikitraw_12331:HG3_PB_SVrefine2PBcRDovetail_4346:HG3_Ill_svaba_12142:HG3_Ill_scalpel_9266:HG3_Ill_manta_2233:HG3_Ill_SVrefine2DISCOVARDovetail_7101:HG3_Ill_Krunchall_12946:HG3_Ill_GATKHCSBGrefine_6429:HG3_Ill_250bpfermikitraw_12584:HG3_Ill_150bpfermikitraw_12215:HG3_10X_allpass_1912:HG2_PB_assemblyticsfalcon_26683:HG2_PB_SVrefine2PBcRplusDovetail_11092:HG2_PB_SVrefine2PB10Xhap12_6978:HG2_Ill_svaba_12002:HG2_Ill_scalpel_9135:HG2_Ill_manta_2737:HG2_Ill_SpiralSDKrefine_17070:HG2_Ill_SVrefine2DISCOVARplusDovetail_13015:HG2_Ill_GATKHCSBGrefine_6525:HG2_Ill_250bpfermikitraw_12947:HG2_Ill_150bpfermikitraw_12160;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6822:HG4_PB_SVrefine2PBcRDovetail_4765:HG4_Ill_svaba_12114:HG4_Ill_manta_2350:HG4_Ill_Krunchall_13524:HG4_Ill_GATKHCSBGrefine_6645:HG4_Ill_250bpfermikitraw_12873:HG4_Ill_150bpfermikitraw_12331:HG3_PB_SVrefine2PBcRDovetail_4346:HG3_Ill_svaba_12142:HG3_Ill_scalpel_9266:HG3_Ill_manta_2233:HG3_Ill_SVrefine2DISCOVARDovetail_7101:HG3_Ill_Krunchall_12946:HG3_Ill_GATKHCSBGrefine_6429:HG3_Ill_250bpfermikitraw_12584:HG3_Ill_150bpfermikitraw_12215:HG3_10X_allpass_1912:HG2_PB_assemblyticsfalcon_26683:HG2_PB_SVrefine2PBcRplusDovetail_11092:HG2_PB_SVrefine2PB10Xhap12_6978:HG2_Ill_svaba_12002:HG2_Ill_scalpel_9135:HG2_Ill_manta_2737:HG2_Ill_SpiralSDKrefine_17070:HG2_Ill_SVrefine2DISCOVARplusDovetail_13015:HG2_Ill_GATKHCSBGrefine_6525:HG2_Ill_250bpfermikitraw_12947:HG2_Ill_150bpfermikitraw_12160;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0530973;ClusterMaxSizeDiff=0.0530973;ClusterMaxEditDist=0.0540541;PBcalls=12;Illcalls=25;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=22;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=14;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=34133;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=57;REFWIDENED=8:85199546-85199658;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4003.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:1/1:2:31:0:12:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr8	85955655	HG3_Ill_manta_2234	TCTCAATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11093:HG2_10X_allpass_1602:HG3_PB_HySA_14333:HG4_PB_assemblyticsfalcon_26132:HG3_PB_assemblyticsfalcon_26595:HG3_Ill_Krunchall_12950:HG2_Ill_Krunchall_13263:HG4_Ill_Spiral_784:HG3_Ill_Spiral_10101:HG3_PB_pbsv_9332:HG4_PB_pbsv_9601:HG4_Ill_MetaSV_5357:HG3_Ill_MetaSV_5304:HG2_Ill_tnscope_1089:HG2_Ill_MetaSV_5129:HG4_PB_SVrefine2PBcRDovetail_4766:HG4_PB_SVrefine2Falcon1Dovetail_5860:HG4_Ill_scalpel_8909:HG4_Ill_manta_2351:HG4_Ill_GATKHCSBGrefine_6646:HG4_10X_allpass_1858:HG3_PB_SVrefine2PBcRDovetail_4348:HG3_PB_SVrefine2Falcon1Dovetail_5826:HG3_Ill_scalpel_9268:HG3_Ill_manta_2234:HG3_Ill_SVrefine2DISCOVARDovetail_7105:HG3_Ill_GATKHCSBGrefine_6431:HG3_10X_allpass_1913:HG2_PB_pbsv_9579:HG2_PB_SVrefine2PB10Xhap12_6980:HG2_PB_SVrefine2Falcon1plusDovetail_11893:HG2_Ill_scalpel_9137:HG2_Ill_manta_2738:HG2_Ill_GATKHCSBGrefine_6526:HG2_10X_SVrefine210Xhap12_6823:HG2_Ill_breakscan11_1385:HG2_PB_assemblyticsPBcR_25898;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6823:HG2_Ill_GATKHCSBGrefine_6526:HG2_Ill_manta_2738:HG2_Ill_scalpel_9137:HG2_PB_SVrefine2Falcon1plusDovetail_11893:HG2_PB_SVrefine2PB10Xhap12_6980:HG2_PB_pbsv_9579:HG3_10X_allpass_1913:HG3_Ill_GATKHCSBGrefine_6431:HG3_Ill_SVrefine2DISCOVARDovetail_7105:HG3_Ill_manta_2234:HG3_Ill_scalpel_9268:HG3_PB_SVrefine2Falcon1Dovetail_5826:HG3_PB_SVrefine2PBcRDovetail_4348:HG4_10X_allpass_1858:HG4_Ill_GATKHCSBGrefine_6646:HG4_Ill_manta_2351:HG4_Ill_scalpel_8909:HG4_PB_SVrefine2Falcon1Dovetail_5860:HG4_PB_SVrefine2PBcRDovetail_4766;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0759878;ClusterMaxSizeDiff=0.0759878;ClusterMaxEditDist=0.0759878;PBcalls=14;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-334;DistBack=3225;DistForward=7507;DistMin=3225;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=8:85955656-85956002;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4005.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:30:0|1:32:0:0:38:./.:0:0:0:0:0/1:25:26:0/1:25:4:.:.:.
chr8	87188248	HG3_PB_SVrefine2Falcon1Dovetail_5830	GTTGCCAAACTGCATTACAGAACCAAGCCTTAAATTCCTTCTGATTATTAAGTATTCCACTGAGTGTGTGTGTGATAACAAAACAGTAGAGGATATTTTCTTCCCAGTGTTCTGCCAAATCTCAGCTTGAATTTAACACTTTGGCTGAGCACATTTCCCCTTTCTGTTTCATCTGGATAAATTTTGCTTTTTTGGCTTCCTGTCATAGAAGGTTATATTTACACAAAGGCCATATCTTATAACATCTCATCTTTGGATCGAAGGAATTTCACAGTGTACCGTCAAGCTAATTAGGAAGTAAAGCTGCTTAGTGTTAGCTGCTATGGAAACATCAGATACACATACATCAGACTATGTCATTTTAATTGGCATTGAGGAGAAGTGGACCTAACATCTAGGAACAATTGAAGCCAAAATTCTATGCTAACTTAACATGGCATTTTAAATTTGAAGTGAAAAGACTGTTTCTAGAAGGTGAAACATGTTCTTTTATGAAAAAACATGAAAAAAGGACACCTGAAATGAAAACAATATTTAAATTGAGTTCATGTGGTTTTATGGAAAAGTACCATGAATTTGCCTACCTTTGTTTCTGCTAAATCTAACCTCTTAGAAAGCTATAAAATCTGTATGCTCAAAGAGCTTCGCTGTGTGCATTTATGAGAACCTAGTCATTAACCCGCAGAATAGTGAATCAGCCAATAGTGTTTGCAGTCCTTCAGTATTTTTATAATTGGTGTTTTGGTTAAGATTCTTTCATTTATAAGAAAAGAAACTGACTTTAGCTCATCTCAGTGAAATAAGGGAGTGTGTGAAAAGGGCTGCTCACAAAATCAAAGGAAGAGCAGTGTACATAGTCTTTGGAGAGGACAGAAATGGGAGCAGATCCAGGGAAATCATCAGGGCTGGCTGCTCACAAATCCTCTCTGTAAGACACTCACATTGGATGACTCAGCTCTCAGAAACTTGCATTTCTGACAAACCTCAAGTCATTTTCAAATGCCTGTGGGGGGAATATCCTGTTGGCCCAGGTGGACTTAGAATTTCTGCTTTTGGATTAATAGCCAATGCAAAGGATACGGGGGAAGCATAAAAGGAAGAGTGATACTGACAGGGCCACTCAGAGAATCATGTACTGAGTAGCAGCCTGATTTGGGAATGCTATTTTTGATGAGCTCATAATCAGTTTCAAGATGAATTTAGTAATAAACAGAACTTTAGTTTTTCCCATATTTTTATCTTTATAAATTAATAATTTTAACACTTTATTAAATACCTACAGTGTACCAGGAAGAAGACGACACTCCAGATATAAAAAAATAAGCTCTAGCTCAAGTCAAAAATGCAGATGTGTAACTAAAGTGATTCGCAACGTAGCAGATGTAATGCAGGCTTGCACCTATTTAGGTAGTTATTAGAAGCATTGAAGAAAAGCATCAATCTACATAGACCTGATGATATCAGGGAAAACTTTATAGAGGAAAGAATCTTTGGGTTGAGTTTCAAAGGATAAGTGGGAATTTGCTATGAAACGAGAGGAGAGAAAAACTGTAGAAAAACTGTATTTCAAAGCATCCCGCATCTACAAAGAGCATGGCTCAGGTGGGAGCTGCAAATGGTTCAGTGTTTTTGGAAGTTTGGAATCTGAAGACGTTACTGAAAATGAGTCTGGAGAGAGAAGCAGTACCTGAAATTTCTGTTATGCACATTAAGACATTGGACAATGGAGAGTCATTAAAAGATTTTTTATTTGGAAAAGTATCATGATTGGAGTTGGTTTTAGGAAGGCAACTTTGGCCAGGCATAGTGGTTCATGTCTATAATCCAGCACTTTAGGAGGCTGAAGCATGTGGATCTCTTGAGCCTAGGAGTTTGAGACCAGCCTGGGCAAGGTGGCAAAATCTTGTCTACAAAGCATAAAAATTATCCATGCATTGTGGTGCATGCCTGTAATCCCAGCTACTCTGGCAGCTGAAGTGGGAAGATCACCTGAACCCAGGGGATTGAATCTGAAGTGAGCCATGATCTCACTATTGCACTCCAGTCTGGGCAACAGAATGAGACCCTGACAAAAGAAAAAAAAATATAGACAACTTTGGCAGCAATGTGGAAAAGAATTTAAATAAGAGAAGACCAGTATAAGACTGCTGCAATAGACCATTTAGGGAGGTCGAGAGAAATTCAGTCTTCTTTCTCAGGCAGCAGTTAAGATAGGGGGGTCACTAACTGATGTAAGCAACTTAAGGAATGTTAAAAAGTTAAAATCATTCAGAGGCTAAGGCATACTTGGGTCTGCAGTCGGAAGAGGAGGGAAAGACTAGAAACTTGTATTTCTGAGTCAACAACATAATATAGCAATTTTAAGTGTGAGTATTGATGAGGTTTCACATATAAAATATTAGAATATTCAGAGATCACCAGACAGAACCCTGGAGACAAGGGATGGATCAAGGAAAATAAGTCTGAGTTAGAAAATCTAAAATAGTAGGAAGAAGGCCAGTAGGGAGCAGAGTTACAGAGAGTAAACAGAGGAAAGGGAAGGGAGTTTCAAGAAAAAAGTATGTATCTGTTAGGATTATACTTAGTTGCAGGTTACAGTCCTTTCTCACATAGACTAGATGTATAGTTAGGCAGCCTACACTAGTGTGGGGCCTCTATTATCATCCAGTTCTTTCTACATTCTACTCTGCATCTTAATCGTCCAAGATGGTTGCTCAAGATTCATCCCAGAAGGAAAAAGGACAGGCCGAAGAAGAGTGCATCACTACCTTGAAAGACACTTACTCTACATTTTATACAACATTTCTAATTCCAATCCATTGGCAGAATTTAGCCACATGGCCATATCTGACTTCAAAGGAGGCTGGGAAAAATAAATCTTATTCTAGACAGCCATAATTCCAGGTGAGCAATGGGTTCCATTTAATAAGAAAAAAGGGGAAAAAGGATCCTGGGAAGCAATTGGAAGCCTTTGTCACATAGGAGTTAGTGAACAATGACATAAATTGAAGAGAGTTGTTGTAAGAAAAAGACTGAAGAGTGTTTATTGCACTAACTAGTGACAATCTTGGCAAAAGTAGTTTCTTGGAGTAGTGAGAATGTAGGTCAAACTGCAGTAGATGAAGAATTGACTTTAAGATAAAGAAAATGAATATGAGTTGAAAATAAGCTGGGCTGCGAAAAGGAAGGTGAGAAGGAAGACTGTAGTTAGCTCAGCACCTTCATGAGAATAGAGCTCATGGATAAGACTTTGATGGGCCATGTGCAAACTGAAGCAGAGGAAACCAGTCATCATGAAGTTGAGAATGGAGCAACCTGCTTCTCCTGGAAACTTCTTCCAATGTCCTCCCAAAGCAGTTCCACCAACATGGGATAGAAGAATGAGAGATATCATATTTCTTGTTTTTGTTTTTGTTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGCTGAAGTGAAGTGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTATCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCCATCACGCTGGGATAATGTTTGTATTTTTTAGTAGAGAGAGACGGGGTTTTACCATGTTGGCCAGGCTGGTCTCGAGCTCCTGATCTCAAGTGATCCACCTGCCTCACCCTCCCAAAGGGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGTCAAGATATATCATGTTTCTTATATGATCCATTTCCTTGTCAGAATTAATTGGTAGTTAATCTAATCCAAATTGGTCTAAAGAATCCATACCAGTGAACCACCTGAATGAATGAGGAGTGGCTAATGTACTCAAATGAGCCAGTTTCCCCACCATGGGATTTTTAGATTTTATACTGGAGAAATACCAAATCAATTTCATTTCAGTGATTGAAACTATAAACTGTAAAATTCGTTGGCAATCATGTTTTCCATCATGTTTTGAAAAGCAACCTGCAATGAGGAAGACAAATAAAAATATAGAGAAATGCGAAGATGAAAGACTAACAGAAAGAAAAATGAGTGCTAGCACCATTTCGATCCTTACTTACTTCCGATTGTTCCTGAGACCCAGAAACATTATTTCTCTCAAGATCTGAGATAATCAGTATTTCTATAAGAAAATTTCTCTTTCTGCTTAAATAAATTGTAGCTGAGTTTCTGTCATTTACCATTAAAAATGTCTGATTAAAACTGAGAGGAACATGTTTATATGTTTAGAAAAAAGTCAGAAGAAAGGTTGAAGATACAAAAAGACTGAGAATTTGAGAGTATGTATATCCAAGATAGCAATCTTGTTTCTGCTTCCCTCTGAGGTAACAGTCCCTGCCCCAAATCACTATTCTCTTTATGACCTCAATCCCTAGACATAGCTGTTTGAATCATGAGAGGGCACCTGCCTTCCTTCTACATCCTAGATGAACTGGTCTGAGCACGTTCTTCTGTGAGGTTTATAATTGAGATGTGTGGACACTAAGCTCATAAAGAATCAGGGCTAAGACTATGATGGGTCATATGCAAGCTGATGCTGAGGAAGCCCACCATAAGAACGGAGAATGGAGCATTCTGCAGAGAGCAGAGGTGACTGGGCCTCTAAAGGGGTGGGGGTGATCGAGGGAGTAGACACTTTTTGTTTTTTTAATAGAGACAGGGTCTCACTCTGTCACCTAGGCTGGAGTACAGTGGTATGGTATCATAGCTCACTGCAGCCTTGAGCTCCTAGGATCAAGTGATCCTCCCATCTGAGCCTCCTAAGTAGCTAGGACCACAGGCATGTACCATCATGCCCAGATAACTTATTTTATTTTATTTTTGTTTTAGAGACACGGTTTTGCTATGTTGCCCAGGCTAGTCTTGAACTCCTGGCCTTAAATGATCCTCCTGCCTTGGCCTCCCAAAACACTAGGATTACAGGTGTGAGGCCATCATGCCTGGCTCCTGGGAATAGATGCCTTGATTCATGCCAATCTGTACATTGTTCAAGGGTAGGAGCTTTGGAATCACTTAAATCTATCTCTGAGCCCTGGCTCCCCTATCAACTTGTGTGACCTTGAACAAGTTACTTAACCTCTTTAAAACTCATTTTTCTCATCTGTAAAATGAAGCTAATAGTAGTATCGTTCTCACAGGATTGTTAGAATCAAAAGAAAGATGCATGTGAAGTGCAGAGCAGTGTCTCACAGTAAACTCACAGTTAATGCTAATAACATAGCATAATCATATCCAATGCTACATGTAATAATTATAATCAAATACAATGACATAAAAGGTAAGCTCTTTCCAGTTCCAATTCTCATTAATCTCAGATACTGTCTTCATTTCTCAATGAAATCTGCGTATCCTTGAAATATCTTTTCTTTCTATTTGCTCTGGTTAGACTAAGAATTTGTTCTTGACAAACGCAGTGAGAATGTTTGCATCCCAATCCCCAGGGTGAGCTTGGACAAGTTACTTCCTTACCCGACATTCAGCAACA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1386:HG2_PB_HySA_17212:HG4_10X_allpass_1859:HG3_10X_allpass_1914:HG4_Ill_Krunchall_13538:HG3_Ill_Krunchall_12960:HG2_Ill_Krunchall_13277:HG2_PB_assemblyticsfalcon_26694:HG2_PB_assemblyticsPBcR_25909:HG3_PB_assemblyticsfalcon_26603:HG2_10X_allpass_1603:HG4_PB_SVrefine2Falcon1Dovetail_5865:HG4_PB_assemblyticsfalcon_26143:HG2_Ill_tnscope_1090:HG4_PB_pbsv_9608:HG4_PB_SVrefine2PBcRDovetail_4775:HG4_Ill_MetaSV_5359:HG3_PB_pbsv_9337:HG3_PB_SVrefine2PBcRDovetail_4357:HG3_PB_SVrefine2Falcon1Dovetail_5830:HG3_Ill_SVrefine2DISCOVARDovetail_7110:HG3_Ill_MetaSV_5306:HG3_Ill_GATKHCSBGrefine_6435:HG2_PB_pbsv_9583:HG2_PB_SVrefine2PBcRplusDovetail_11102:HG2_PB_SVrefine2PB10Xhap12_6984:HG2_PB_SVrefine2Falcon1plusDovetail_11897:HG2_Ill_SpiralSDKrefine_17080:HG2_Ill_SVrefine2DISCOVARplusDovetail_13023:HG2_Ill_MetaSV_5131:HG2_Ill_GATKHCSBGrefine_6530:HG2_10X_SVrefine210Xhap12_6825;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6825:HG2_Ill_GATKHCSBGrefine_6530:HG2_Ill_MetaSV_5131:HG2_Ill_SVrefine2DISCOVARplusDovetail_13023:HG2_Ill_SpiralSDKrefine_17080:HG2_PB_SVrefine2Falcon1plusDovetail_11897:HG2_PB_SVrefine2PB10Xhap12_6984:HG2_PB_SVrefine2PBcRplusDovetail_11102:HG2_PB_pbsv_9583:HG3_Ill_GATKHCSBGrefine_6435:HG3_Ill_MetaSV_5306:HG3_Ill_SVrefine2DISCOVARDovetail_7110:HG3_PB_SVrefine2Falcon1Dovetail_5830:HG3_PB_SVrefine2PBcRDovetail_4357:HG3_PB_pbsv_9337:HG4_Ill_MetaSV_5359:HG4_PB_SVrefine2PBcRDovetail_4775:HG4_PB_pbsv_9608;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0020031;ClusterMaxSizeDiff=0.0020031;ClusterMaxEditDist=0.0020031;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-5495;DistBack=13704;DistForward=-5491;DistMin=-5491;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=8:87188249-87193748;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4006.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:97:./.:0:10:0:3:./.:0:0:0:0:1/1:0:30:1/1:0:434:4488:.:.
chr8	87706277	HG2_Ill_250bpfermikitraw_12968	GGACGGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCACCTCCCTCCCA	G	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_12968:HG4_Ill_svaba_12127:HG3_Ill_svaba_12157:HG3_Ill_250bpfermikitraw_12606:HG2_Ill_svaba_12016;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12968:HG4_Ill_svaba_12127:HG3_Ill_svaba_12157:HG3_Ill_250bpfermikitraw_12606:HG2_Ill_svaba_12016;NumExactMatchSVs=5;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-50;DistBack=-144;DistForward=-20;DistMin=-144;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=180;REFWIDENED=8:87706266-87706495;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4007.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:30:./.:13:12:8:11:./.:0:0:0:0:0/1:11:17:./.:.:.:.:.:.
chr8	87814933	HG3_Ill_250bpfermikitraw_12607	ATATATTGAAAATTTCCATAATATAATAATATATATTTTATATTATAATCCATTAAAAGTCAGAAAGTATTCT	A	20	PASS	ClusterIDs=HG3_PB_HySA_14345:HG2_Ill_Krunchall_13284:HG4_PB_pbsv_9611:HG2_PB_pbsv_9585:HG3_PB_pbsv_9340:HG2_PB_HySA_17218:HG4_PB_assemblyticsfalcon_26149:HG4_Ill_Krunchall_13545:HG4_Ill_GATKHCSBGrefine_6652:HG4_Ill_250bpfermikitraw_12893:HG3_PB_assemblyticsfalcon_26609:HG3_Ill_scalpel_9277:HG3_Ill_manta_2237:HG3_Ill_Krunchall_12967:HG3_Ill_GATKHCSBGrefine_6438:HG3_Ill_250bpfermikitraw_12607:HG2_PB_assemblyticsfalcon_26699:HG2_PB_assemblyticsPBcR_25914:HG2_Ill_manta_2740:HG2_Ill_SpiralSDKrefine_17085:HG2_Ill_Krunchall_13283:HG2_Ill_GATKHCSBGrefine_6534:HG2_Ill_250bpfermikitraw_12969;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12969:HG2_Ill_GATKHCSBGrefine_6534:HG2_Ill_Krunchall_13283:HG2_Ill_SpiralSDKrefine_17085:HG2_Ill_manta_2740:HG2_PB_assemblyticsPBcR_25914:HG2_PB_assemblyticsfalcon_26699:HG3_Ill_250bpfermikitraw_12607:HG3_Ill_GATKHCSBGrefine_6438:HG3_Ill_Krunchall_12967:HG3_Ill_manta_2237:HG3_Ill_scalpel_9277:HG3_PB_assemblyticsfalcon_26609:HG4_Ill_250bpfermikitraw_12893:HG4_Ill_GATKHCSBGrefine_6652:HG4_Ill_Krunchall_13545:HG4_PB_assemblyticsfalcon_26149;NumExactMatchSVs=17;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.08;PBcalls=9;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-72;DistBack=33387;DistForward=4814;DistMin=4814;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=8:87814934-87815080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4008.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:1/1:3:30:2:20:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr8	89026790	HG2_Ill_manta_2745	GGGTGATCCAGTTCCACTTAATGTTATTTTCTTAACACCATTTTCTTTTCTTTCCTTTTCTTTTTTTTTTTTTTTTTTT	G	20	PASS	ClusterIDs=HG2_PB_HySA_17229:HG3_PB_HySA_14352:HG3_PB_pbsv_9345:HG2_PB_pbsv_9594:HG3_Ill_svaba_12161:HG3_Ill_scalpel_9283:HG3_Ill_Krunchall_12974:HG3_Ill_GATKHC_15473:HG3_Ill_GATKHCSBGrefine_6444:HG3_Ill_250bpfermikitraw_12613:HG3_Ill_150bpfermikitraw_12236:HG3_CG_vcfBeta_5223:HG3_10X_allpass_1915:HG2_Ill_svaba_12022:HG2_Ill_scalpel_9153:HG2_Ill_manta_2745:HG2_Ill_SpiralSDKrefine_17093:HG2_Ill_Krunchall_13292:HG2_Ill_GATKHC_15504:HG2_Ill_GATKHCSBGrefine_6542:HG2_Ill_250bpfermikitraw_12977:HG2_Ill_150bpfermikitraw_12182:HG2_CG_vcfBeta_5488:HG2_10X_allpass_1605:HG3_PB_assemblyticsfalcon_26619:HG2_Ill_breakscan11_1387;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_1605:HG2_CG_vcfBeta_5488:HG2_Ill_150bpfermikitraw_12182:HG2_Ill_250bpfermikitraw_12977:HG2_Ill_GATKHCSBGrefine_6542:HG2_Ill_GATKHC_15504:HG2_Ill_Krunchall_13292:HG2_Ill_SpiralSDKrefine_17093:HG2_Ill_manta_2745:HG2_Ill_scalpel_9153:HG2_Ill_svaba_12022:HG3_10X_allpass_1915:HG3_CG_vcfBeta_5223:HG3_Ill_150bpfermikitraw_12236:HG3_Ill_250bpfermikitraw_12613:HG3_Ill_GATKHCSBGrefine_6444:HG3_Ill_GATKHC_15473:HG3_Ill_Krunchall_12974:HG3_Ill_scalpel_9283:HG3_Ill_svaba_12161;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.0382166;PBcalls=5;Illcalls=17;TenXcalls=2;CGcalls=2;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=2;HG2count=14;HG3count=12;HG4count=0;NumTechs=4;NumTechsExact=3;SVLEN=-78;DistBack=269777;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:89026789-89026870;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4009.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:14:./.:9:4:8:3:./.:0:0:0:0:0/1:19:27:./.:.:.:.:.:.
chr8	89351927	HG2_PB_pbsv_9596	TTAAGGGTTGCCAGATTTTGCAAATGAAAATACAGGATTCACAGTTAAATTTGAGTTTCAGATAAACAACAAATAATTTGTAGTATATCTTTTGCAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_17232:HG3_PB_HySA_14357:HG4_PB_pbsv_9621:HG4_Ill_Krunchall_13560:HG3_PB_pbsv_9347:HG4_PB_assemblyticsfalcon_26159:HG4_PB_SVrefine2PBcRDovetail_4782:HG4_PB_SVrefine2Falcon1Dovetail_5872:HG4_Ill_svaba_12137:HG4_Ill_scalpel_8926:HG4_Ill_manta_2357:HG4_Ill_SVrefine2DISCOVARDovetail_6907:HG4_Ill_Krunchall_13559:HG4_Ill_GATKHC_15550:HG4_Ill_GATKHCSBGrefine_6659:HG4_Ill_250bpfermikitraw_12905:HG4_Ill_150bpfermikitraw_12362:HG4_CG_vcfBeta_6191:HG4_10X_allpass_1861:HG3_PB_SVrefine2PBcRDovetail_4363:HG3_Ill_svaba_12165:HG3_Ill_manta_2241:HG3_Ill_SVrefine2DISCOVARDovetail_7119:HG3_Ill_Krunchall_12978:HG3_Ill_GATKHC_15477:HG3_Ill_GATKHCSBGrefine_6447:HG3_Ill_250bpfermikitraw_12617:HG3_Ill_150bpfermikitraw_12240:HG3_CG_vcfBeta_5224:HG3_10X_allpass_1916:HG2_PB_pbsv_9596:HG2_PB_assemblyticsPBcR_25926:HG2_PB_SVrefine2PBcRplusDovetail_11107:HG2_PB_SVrefine2PB10Xhap12_6988:HG2_Ill_svaba_12025:HG2_Ill_manta_2747:HG2_Ill_breakscan11_1388:HG2_Ill_SpiralSDKrefine_17096:HG2_Ill_SVrefine2DISCOVARplusDovetail_13030:HG2_Ill_Krunchall_13295:HG2_Ill_GATKHC_15508:HG2_Ill_GATKHCSBGrefine_6544:HG2_Ill_250bpfermikitraw_12980:HG2_Ill_150bpfermikitraw_12185:HG2_CG_vcfBeta_5489:HG2_10X_SVrefine210Xhap12_6834;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6834:HG2_CG_vcfBeta_5489:HG2_Ill_150bpfermikitraw_12185:HG2_Ill_250bpfermikitraw_12980:HG2_Ill_GATKHCSBGrefine_6544:HG2_Ill_GATKHC_15508:HG2_Ill_Krunchall_13295:HG2_Ill_SVrefine2DISCOVARplusDovetail_13030:HG2_Ill_SpiralSDKrefine_17096:HG2_Ill_breakscan11_1388:HG2_Ill_manta_2747:HG2_Ill_svaba_12025:HG2_PB_SVrefine2PB10Xhap12_6988:HG2_PB_SVrefine2PBcRplusDovetail_11107:HG2_PB_assemblyticsPBcR_25926:HG2_PB_pbsv_9596:HG3_10X_allpass_1916:HG3_CG_vcfBeta_5224:HG3_Ill_150bpfermikitraw_12240:HG3_Ill_250bpfermikitraw_12617:HG3_Ill_GATKHCSBGrefine_6447:HG3_Ill_GATKHC_15477:HG3_Ill_Krunchall_12978:HG3_Ill_SVrefine2DISCOVARDovetail_7119:HG3_Ill_manta_2241:HG3_Ill_svaba_12165:HG3_PB_SVrefine2PBcRDovetail_4363:HG4_10X_allpass_1861:HG4_CG_vcfBeta_6191:HG4_Ill_150bpfermikitraw_12362:HG4_Ill_250bpfermikitraw_12905:HG4_Ill_GATKHCSBGrefine_6659:HG4_Ill_GATKHC_15550:HG4_Ill_Krunchall_13559:HG4_Ill_SVrefine2DISCOVARDovetail_6907:HG4_Ill_manta_2357:HG4_Ill_scalpel_8926:HG4_Ill_svaba_12137:HG4_PB_SVrefine2Falcon1Dovetail_5872:HG4_PB_SVrefine2PBcRDovetail_4782:HG4_PB_assemblyticsfalcon_26159;NumExactMatchSVs=41;ClusterMaxShiftDist=0.0310881;ClusterMaxSizeDiff=0.0310881;ClusterMaxEditDist=0.0310881;PBcalls=12;Illcalls=28;TenXcalls=3;CGcalls=3;PBexactcalls=8;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=3;HG2count=17;HG3count=13;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-96;DistBack=68777;DistForward=6355;DistMin=6355;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=8:89351928-89352025;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4010.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:31:./.:10:4:10:35:./.:0:0:0:0:0/1:31:32:./.:.:.:.:.:.
chr8	89392207	HG3_Ill_MetaSV_5310	TCAATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1389:HG4_PB_assemblyticsfalcon_26160:HG2_PB_assemblyticsfalcon_26714:HG2_PB_assemblyticsPBcR_25927:HG3_PB_assemblyticsfalcon_26622:HG4_Ill_Krunchall_13561:HG3_Ill_Krunchall_12980:HG2_Ill_Krunchall_13296:HG2_PB_HySA_17233:HG4_PB_pbsv_9622:HG4_Ill_MetaSV_5363:HG2_Ill_tnscope_1091:HG4_PB_SVrefine2PBcRDovetail_4783:HG4_PB_SVrefine2Falcon1Dovetail_5873:HG4_Ill_scalpel_8927:HG4_Ill_manta_2358:HG4_Ill_SVrefine2DISCOVARDovetail_6908:HG4_Ill_GATKHCSBGrefine_6660:HG4_10X_allpass_1862:HG3_PB_SVrefine2PBcRDovetail_4364:HG3_PB_SVrefine2Falcon1Dovetail_5838:HG3_Ill_scalpel_9286:HG3_Ill_manta_2242:HG3_Ill_SVrefine2DISCOVARDovetail_7120:HG3_Ill_MetaSV_5310:HG3_Ill_GATKHCSBGrefine_6448:HG3_10X_allpass_1917:HG2_PB_pbsv_9597:HG2_PB_SVrefine2PBcRplusDovetail_11108:HG2_PB_SVrefine2PB10Xhap12_6989:HG2_PB_SVrefine2Falcon1plusDovetail_11904:HG2_Ill_scalpel_9156:HG2_Ill_manta_2748:HG2_Ill_SVrefine2DISCOVARplusDovetail_13031:HG2_Ill_GATKHCSBGrefine_6545:HG2_10X_SVrefine210Xhap12_6835:HG3_PB_pbsv_9348;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6835:HG2_Ill_GATKHCSBGrefine_6545:HG2_Ill_SVrefine2DISCOVARplusDovetail_13031:HG2_Ill_manta_2748:HG2_Ill_scalpel_9156:HG2_PB_SVrefine2Falcon1plusDovetail_11904:HG2_PB_SVrefine2PB10Xhap12_6989:HG2_PB_SVrefine2PBcRplusDovetail_11108:HG2_PB_pbsv_9597:HG3_10X_allpass_1917:HG3_Ill_GATKHCSBGrefine_6448:HG3_Ill_MetaSV_5310:HG3_Ill_SVrefine2DISCOVARDovetail_7120:HG3_Ill_manta_2242:HG3_Ill_scalpel_9286:HG3_PB_SVrefine2Falcon1Dovetail_5838:HG3_PB_SVrefine2PBcRDovetail_4364:HG4_10X_allpass_1862:HG4_Ill_GATKHCSBGrefine_6660:HG4_Ill_SVrefine2DISCOVARDovetail_6908:HG4_Ill_manta_2358:HG4_Ill_scalpel_8927:HG4_PB_SVrefine2Falcon1Dovetail_5873:HG4_PB_SVrefine2PBcRDovetail_4783;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0693069;ClusterMaxSizeDiff=0.0693069;ClusterMaxEditDist=0.0693069;PBcalls=15;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=-308;DistForward=-297;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=8:89392208-89392525;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4011.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:0:29:1:18:./.:0:0:0:0:1/1:0:43:./.:1:13:.:.:.
chr8	89550832	HG2_Ill_SVrefine2DISCOVARplusDovetail_13033	CCCTTTGGGTATGTTTATCTATATCCATGATATCATCTATATTCATATGCTGATGATTCTCAATTTTTTTCTGAGAGAGAAATTCATCTATCTAACCTA	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_677:HG2_PB_assemblyticsPBcR_25929:HG2_PB_SVrefine2PBcRplusDovetail_11109:HG2_PB_assemblyticsfalcon_26716:HG3_PB_pbsv_9349:HG3_PB_SVrefine2PBcRDovetail_4365:HG2_PB_pbsv_9598:HG3_Ill_svaba_12166:HG3_Ill_scalpel_9287:HG3_Ill_manta_2243:HG3_Ill_Krunchall_12982:HG3_Ill_GATKHC_15479:HG3_Ill_GATKHCSBGrefine_6449:HG3_Ill_250bpfermikitraw_12619:HG3_Ill_150bpfermikitraw_12241:HG3_10X_allpass_1918:HG2_PB_SVrefine2Falcon1plusDovetail_11905:HG2_Ill_svaba_12026:HG2_Ill_scalpel_9157:HG2_Ill_manta_2749:HG2_Ill_breakscan11_1390:HG2_Ill_SpiralSDKrefine_17097:HG2_Ill_SVrefine2DISCOVARplusDovetail_13033:HG2_Ill_Krunchall_13298:HG2_Ill_GATKHC_15510:HG2_Ill_GATKHCSBGrefine_6546:HG2_Ill_250bpfermikitraw_12982:HG2_Ill_150bpfermikitraw_12187:HG2_10X_SVrefine210Xhap12_6836:HG3_Ill_Spiral_10119;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6836:HG2_Ill_150bpfermikitraw_12187:HG2_Ill_250bpfermikitraw_12982:HG2_Ill_GATKHCSBGrefine_6546:HG2_Ill_GATKHC_15510:HG2_Ill_Krunchall_13298:HG2_Ill_SVrefine2DISCOVARplusDovetail_13033:HG2_Ill_SpiralSDKrefine_17097:HG2_Ill_breakscan11_1390:HG2_Ill_manta_2749:HG2_Ill_scalpel_9157:HG2_Ill_svaba_12026:HG2_PB_SVrefine2Falcon1plusDovetail_11905:HG3_10X_allpass_1918:HG3_Ill_150bpfermikitraw_12241:HG3_Ill_250bpfermikitraw_12619:HG3_Ill_GATKHCSBGrefine_6449:HG3_Ill_GATKHC_15479:HG3_Ill_Krunchall_12982:HG3_Ill_manta_2243:HG3_Ill_scalpel_9287:HG3_Ill_svaba_12166;NumExactMatchSVs=22;ClusterMaxShiftDist=0.134715;ClusterMaxSizeDiff=0.134715;ClusterMaxEditDist=0.134715;PBcalls=7;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-98;DistBack=31978;DistForward=-97;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:89550833-89550931;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4012.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:40:0|1:41:2:2:38:./.:0:0:0:0:0/1:29:13:./.:.:.:.:.:.
chr8	90468260	HG3_Ill_scalpel_9294	AAATATATATTATATATGAAATACATAATATATATTAAATATATAATATTTAAATATAAATATATTAAATATTTATATTTAATTTAATATTGTTTAATTTAATATTAATGTAATTTATAATACATTTATAATATAAACATATTATAAATATATTTAAATATAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6839:HG4_PB_SVrefine2PBcRDovetail_4784:HG2_Ill_Krunchall_13307:HG2_Ill_Krunchall_13306:HG4_PB_assemblyticsfalcon_26167:HG2_PB_assemblyticsfalcon_26720:HG2_PB_assemblyticsPBcR_25934:HG3_PB_assemblyticsfalcon_26626:HG2_PB_HySA_17239:HG4_PB_pbsv_9625:HG4_Ill_svaba_12142:HG4_Ill_GATKHCSBGrefine_6663:HG4_10X_allpass_1863:HG3_Ill_svaba_12170:HG3_Ill_scalpel_9294:HG3_Ill_manta_2244:HG3_Ill_GATKHCSBGrefine_6451:HG3_Ill_250bpfermikitraw_12626:HG3_Ill_150bpfermikitraw_12244:HG3_10X_allpass_1919:HG2_Ill_svaba_12031:HG2_Ill_scalpel_9164:HG2_Ill_manta_2750:HG2_Ill_SpiralSDKrefine_17103:HG2_Ill_SVrefine2DISCOVARplusDovetail_13039:HG2_Ill_GATKHCSBGrefine_6548:HG2_Ill_250bpfermikitraw_12991:HG2_Ill_150bpfermikitraw_12191:HG2_10X_allpass_1606:HG3_PB_HySA_14360:HG2_Ill_MetaSV_5134:HG3_PB_pbsv_9351:HG2_PB_pbsv_9600:HG4_PB_SVrefine2Falcon1Dovetail_5874:HG4_Ill_SVrefine2DISCOVARDovetail_6914:HG3_PB_SVrefine2PBcRDovetail_4366:HG3_PB_SVrefine2Falcon1Dovetail_5839:HG3_Ill_SVrefine2DISCOVARDovetail_7124:HG2_PB_SVrefine2PBcRplusDovetail_11110:HG2_PB_SVrefine2PB10Xhap12_6990:HG2_PB_SVrefine2Falcon1plusDovetail_11906:HG2_Ill_SVrefine2DISCOVARplusDovetail_13038;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_1606:HG2_Ill_150bpfermikitraw_12191:HG2_Ill_250bpfermikitraw_12991:HG2_Ill_GATKHCSBGrefine_6548:HG2_Ill_SVrefine2DISCOVARplusDovetail_13039:HG2_Ill_SpiralSDKrefine_17103:HG2_Ill_manta_2750:HG2_Ill_scalpel_9164:HG2_Ill_svaba_12031:HG3_10X_allpass_1919:HG3_Ill_150bpfermikitraw_12244:HG3_Ill_250bpfermikitraw_12626:HG3_Ill_GATKHCSBGrefine_6451:HG3_Ill_manta_2244:HG3_Ill_scalpel_9294:HG3_Ill_svaba_12170:HG4_10X_allpass_1863:HG4_Ill_GATKHCSBGrefine_6663:HG4_Ill_svaba_12142;NumExactMatchSVs=19;ClusterMaxShiftDist=0.204473;ClusterMaxSizeDiff=0.204473;ClusterMaxEditDist=0.204473;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-162;DistBack=12490;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=8:90468253-90468431;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4013.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:66:1/1:2:18:0:11:./.:0:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr8	92152856	HG3_PB_SVrefine2Falcon1Dovetail_5845	TTCAATATGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_10X_allpass_1920:HG4_PB_HySA_13930:HG4_PB_assemblyticsfalcon_26179:HG2_PB_assemblyticsfalcon_26729:HG2_PB_assemblyticsPBcR_25945:HG2_10X_allpass_1607:HG3_PB_assemblyticsfalcon_26639:HG3_Ill_Krunchall_12996:HG2_Ill_Krunchall_13312:HG4_Ill_Spiral_786:HG3_Ill_Spiral_10131:HG2_Ill_Spiral_678:HG4_PB_pbsv_9632:HG2_PB_HySA_17250:HG4_PB_SVrefine2PBcRDovetail_4790:HG4_PB_SVrefine2Falcon1Dovetail_5879:HG4_Ill_manta_2359:HG4_Ill_SVrefine2DISCOVARDovetail_6920:HG4_Ill_GATKHCSBGrefine_6665:HG4_10X_allpass_1864:HG3_PB_SVrefine2Falcon1Dovetail_5845:HG3_Ill_scalpel_9301:HG3_Ill_manta_2245:HG3_Ill_SVrefine2DISCOVARDovetail_7131:HG3_Ill_GATKHCSBGrefine_6453:HG2_PB_pbsv_9607:HG2_PB_SVrefine2PBcRplusDovetail_11115:HG2_PB_SVrefine2PB10Xhap12_6995:HG2_PB_SVrefine2Falcon1plusDovetail_11911:HG2_Ill_scalpel_9167:HG2_Ill_manta_2751:HG2_Ill_breakscan11_1391:HG2_Ill_SVrefine2DISCOVARplusDovetail_13045:HG2_Ill_GATKHCSBGrefine_6551:HG2_10X_SVrefine210Xhap12_6845:HG4_Ill_MetaSV_5364:HG3_Ill_MetaSV_5312:HG2_Ill_tnscope_1092:HG2_Ill_MetaSV_5135;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6845:HG2_Ill_GATKHCSBGrefine_6551:HG2_Ill_SVrefine2DISCOVARplusDovetail_13045:HG2_Ill_breakscan11_1391:HG2_Ill_manta_2751:HG2_Ill_scalpel_9167:HG2_PB_SVrefine2Falcon1plusDovetail_11911:HG2_PB_SVrefine2PB10Xhap12_6995:HG2_PB_SVrefine2PBcRplusDovetail_11115:HG2_PB_pbsv_9607:HG3_Ill_GATKHCSBGrefine_6453:HG3_Ill_SVrefine2DISCOVARDovetail_7131:HG3_Ill_manta_2245:HG3_Ill_scalpel_9301:HG3_PB_SVrefine2Falcon1Dovetail_5845:HG4_10X_allpass_1864:HG4_Ill_GATKHCSBGrefine_6665:HG4_Ill_SVrefine2DISCOVARDovetail_6920:HG4_Ill_manta_2359:HG4_PB_SVrefine2Falcon1Dovetail_5879:HG4_PB_SVrefine2PBcRDovetail_4790;NumExactMatchSVs=21;ClusterMaxShiftDist=0.194611;ClusterMaxSizeDiff=0.194611;ClusterMaxEditDist=0.194611;PBcalls=14;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=22016;DistForward=30347;DistMin=22016;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=8:92152857-92153196;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4014.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:45:1/1:2:16:0:18:./.:0:0:0:0:1/1:0:52:1/1:1:12:.:.:.
chr8	92840214	HG4_Ill_Krunchall_13582	AATCTGTGATGTTTATTATGTGAATGTATTCTCTTATATGTGTACCCTTGTGCAGTATACAACTGCACATCTGT	A	20	PASS	ClusterIDs=HG2_PB_HySA_17254:HG3_PB_pbsv_9359:HG4_PB_pbsv_9635:HG2_PB_HySA_17255:HG2_PB_pbsv_9610:HG4_PB_HySA_13935:HG3_PB_HySA_14371:HG4_PB_SVrefine2PBcRDovetail_4793:HG4_PB_SVrefine2Falcon1Dovetail_5882:HG4_Ill_svaba_12158:HG4_Ill_scalpel_8941:HG4_Ill_manta_2361:HG4_Ill_SVrefine2DISCOVARDovetail_6923:HG4_Ill_Krunchall_13582:HG4_Ill_GATKHC_15581:HG4_Ill_GATKHCSBGrefine_6668:HG4_Ill_250bpfermikitraw_12931:HG4_Ill_150bpfermikitraw_12382:HG3_PB_SVrefine2Falcon1Dovetail_5848:HG3_Ill_svaba_12181:HG3_Ill_scalpel_9302:HG3_Ill_manta_2247:HG3_Ill_SVrefine2DISCOVARDovetail_7135:HG3_Ill_Krunchall_12998:HG3_Ill_GATKHC_15498:HG3_Ill_GATKHCSBGrefine_6455:HG3_Ill_250bpfermikitraw_12635:HG3_Ill_150bpfermikitraw_12256:HG2_PB_SVrefine2PBcRplusDovetail_11118:HG2_PB_SVrefine2PB10Xhap12_6997:HG2_PB_SVrefine2Falcon1plusDovetail_11914:HG2_Ill_svaba_12043:HG2_Ill_manta_2753:HG2_Ill_SpiralSDKrefine_17109:HG2_Ill_SVrefine2DISCOVARplusDovetail_13047:HG2_Ill_Krunchall_13314:HG2_Ill_GATKHC_15530:HG2_Ill_250bpfermikitraw_12999:HG2_Ill_150bpfermikitraw_12199:HG2_10X_SVrefine210Xhap12_6847:HG4_Ill_Spiral_787;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6847:HG2_Ill_150bpfermikitraw_12199:HG2_Ill_250bpfermikitraw_12999:HG2_Ill_GATKHC_15530:HG2_Ill_Krunchall_13314:HG2_Ill_SVrefine2DISCOVARplusDovetail_13047:HG2_Ill_SpiralSDKrefine_17109:HG2_Ill_manta_2753:HG2_Ill_svaba_12043:HG2_PB_SVrefine2Falcon1plusDovetail_11914:HG2_PB_SVrefine2PB10Xhap12_6997:HG2_PB_SVrefine2PBcRplusDovetail_11118:HG3_Ill_150bpfermikitraw_12256:HG3_Ill_250bpfermikitraw_12635:HG3_Ill_GATKHCSBGrefine_6455:HG3_Ill_GATKHC_15498:HG3_Ill_Krunchall_12998:HG3_Ill_SVrefine2DISCOVARDovetail_7135:HG3_Ill_manta_2247:HG3_Ill_scalpel_9302:HG3_Ill_svaba_12181:HG3_PB_SVrefine2Falcon1Dovetail_5848:HG4_Ill_150bpfermikitraw_12382:HG4_Ill_250bpfermikitraw_12931:HG4_Ill_GATKHCSBGrefine_6668:HG4_Ill_GATKHC_15581:HG4_Ill_Krunchall_13582:HG4_Ill_SVrefine2DISCOVARDovetail_6923:HG4_Ill_manta_2361:HG4_Ill_scalpel_8941:HG4_Ill_svaba_12158:HG4_PB_SVrefine2Falcon1Dovetail_5882:HG4_PB_SVrefine2PBcRDovetail_4793;NumExactMatchSVs=33;ClusterMaxShiftDist=0.103896;ClusterMaxSizeDiff=0.103896;ClusterMaxEditDist=0.116883;PBcalls=13;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-73;DistBack=3289;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=78;REFWIDENED=8:92840215-92840365;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4015.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:51:1/1:3:30:2:19:./.:0:0:0:0:1/1:0:41:./.:.:.:.:.:.
chr8	93352155	HG3_PB_SVrefine2Falcon1Dovetail_5850	CATCCCCTAATAATATCATATGGCTGTCTATTTCTTCCTTCAGATCTGCCAATAGTTACTTCATTTAGAATCATGGCCTCCAGCTCCATCCAAGTTGCTGCAAGAGACATAATTTATTCCTTTTTATGGCTGGGTAGTGTTTCATGGTGTAGATACAGGTATTGAC	A	20	PASS	ClusterIDs=HG2_10X_allpass_1608:HG3_Ill_Krunchall_13002:HG2_Ill_Krunchall_13319:HG3_PB_HySA_14374:HG3_PB_pbsv_9362:HG3_Ill_GATKHC_15504:HG3_Ill_GATKHCSBGrefine_6456:HG2_Ill_GATKHC_15536:HG2_Ill_GATKHCSBGrefine_6553:HG2_PB_PB10Xdip_30664:HG2_Ill_SpiralSDKrefine_17112:HG3_PB_SVrefine2PBcRDovetail_4376:HG3_PB_SVrefine2Falcon1Dovetail_5850:HG3_Ill_manta_2250:HG3_Ill_SVrefine2DISCOVARDovetail_7137:HG2_PB_SVrefine2PB10Xhap12_7000:HG2_Ill_manta_2754:HG2_10X_SVrefine210Xhap12_6849:HG3_Ill_Spiral_10139:HG2_Ill_Spiral_679:HG3_Ill_MetaSV_5313:HG2_Ill_MetaSV_5137:HG3_PB_assemblyticsfalcon_26647:HG2_PB_pbsv_9613:HG3_Ill_scalpel_9304:HG3_Ill_250bpfermikitraw_12641:HG3_Ill_150bpfermikitraw_12263:HG3_10X_allpass_1922;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6849:HG2_Ill_manta_2754:HG2_PB_PB10Xdip_30664:HG3_PB_SVrefine2PBcRDovetail_4376:HG3_PB_SVrefine2Falcon1Dovetail_5850:HG3_Ill_manta_2250:HG3_Ill_SVrefine2DISCOVARDovetail_7137:HG2_PB_SVrefine2PB10Xhap12_7000;NumExactMatchSVs=8;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.03003;PBcalls=8;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=16;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-165;DistBack=23316;DistForward=132000;DistMin=23316;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=75;REFWIDENED=8:93352141-93352380;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9939;PctRecOverlap=0.988;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=4016.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:18:0|1:34:1:3:20:./.:0:0:0:0:0/1:32:24:./.:.:.:.:.:.
chr8	95006233	HG2_PB_SVrefine2PBcRplusDovetail_11124	TAAATATGTTTCTTAAATTTTATGCATACTTAGCTGCTTGTGAGTTTTGACATAAACATGATCTAGAAAGTAAAACTGCCTTAAAGATGAATTTAGCCTTGACTGACTTGATTGTTTGATTGATTTATCAACAGGGTAATTGGCAAAGCTAAGATATAATCACATATTTTATTGATTGATTCCTA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13053:HG2_PB_assemblyticsPBcR_25969:HG2_PB_pbsv_9617:HG4_PB_pbsv_9641:HG2_PB_HySA_17275:HG4_PB_HySA_13953:HG4_10X_allpass_1866:HG2_PB_SVrefine2PBcRplusDovetail_11124:HG2_PB_SVrefine2PB10Xhap12_7003:HG2_10X_allpass_1609:HG2_PB_SVrefine2Falcon1plusDovetail_11921;NumClusterSVs=11;ExactMatchIDs=HG2_10X_allpass_1609:HG2_PB_SVrefine2PB10Xhap12_7003:HG2_PB_SVrefine2PBcRplusDovetail_11124:HG4_10X_allpass_1866;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0216216;ClusterMaxSizeDiff=0.0216216;ClusterMaxEditDist=0.0217984;PBcalls=8;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-184;DistBack=23235;DistForward=-15;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=182;REFWIDENED=8:95006222-95006587;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4017.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:./.:16:2:2:6:./.:0:0:0:0:0/1:26:20:./.:.:.:.:.:.
chr8	96345260	HG2_Ill_GATKHC_15573	ATATATATATATATATATATATATATATATATATATTTATATATATATATATATATATATATTTATATATATATATATATATATATATATTTATATATATATATATATATATATATT	A	20	PASS	ClusterIDs=HG3_PB_HySA_14401:HG2_PB_pbsv_9621:HG2_PB_SVrefine2PB10Xhap12_7006:HG4_PB_HySA_13964:HG4_Ill_GATKHC_15623:HG4_Ill_GATKHCSBGrefine_6681:HG3_PB_SVrefine2Falcon1Dovetail_5859:HG4_PB_assemblyticsfalcon_26212:HG4_PB_SVrefine2PBcRDovetail_4798:HG4_PB_SVrefine2Falcon1Dovetail_5893:HG3_PB_SVrefine2PBcRDovetail_4384:HG3_Ill_SVrefine2DISCOVARDovetail_7151:HG3_Ill_GATKHC_15540:HG3_Ill_GATKHCSBGrefine_6468:HG3_Ill_250bpfermikitraw_12668:HG3_Ill_150bpfermikitraw_12291:HG3_10X_allpass_1926:HG2_Ill_SVrefine2DISCOVARplusDovetail_13060:HG2_Ill_GATKHC_15573:HG2_Ill_GATKHCSBGrefine_6564:HG4_Ill_svaba_12188:HG2_Ill_SpiralSDKrefine_17133:HG3_Ill_svaba_12209:HG2_Ill_svaba_12068:HG4_PB_pbsv_9646:HG2_PB_assemblyticsPBcR_25979:HG4_Ill_SVrefine2DISCOVARDovetail_6929:HG4_CG_vcfBeta_6213:HG2_PB_SVrefine2Falcon1plusDovetail_11924:HG2_Ill_manta_2756:HG2_10X_SVrefine210Xhap12_6860:HG2_PB_SVrefine2PBcRplusDovetail_11127:HG3_Ill_manta_2254:HG2_Ill_Spiral_681:HG4_Ill_MetaSV_5369:HG2_Ill_MetaSV_5140:HG4_Ill_svaba_12187:HG2_Ill_svaba_12067:HG2_PB_assemblyticsfalcon_26765:HG3_PB_pbsv_9374:HG4_Ill_GATKHC_15622:HG4_Ill_GATKHCSBGrefine_6680:HG4_10X_allpass_1867:HG2_Ill_GATKHC_15572:HG2_Ill_GATKHCSBGrefine_6563:HG2_PB_HySA_17291:HG2_Ill_Krunchall_13347:HG3_PB_assemblyticsfalcon_26682:HG4_Ill_Krunchall_13613;NumClusterSVs=49;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6564:HG2_Ill_GATKHC_15573:HG2_Ill_SVrefine2DISCOVARplusDovetail_13060:HG3_10X_allpass_1926:HG3_Ill_150bpfermikitraw_12291:HG3_Ill_250bpfermikitraw_12668:HG3_Ill_GATKHCSBGrefine_6468:HG3_Ill_GATKHC_15540:HG3_Ill_SVrefine2DISCOVARDovetail_7151:HG3_PB_SVrefine2PBcRDovetail_4384:HG4_PB_SVrefine2Falcon1Dovetail_5893:HG4_PB_SVrefine2PBcRDovetail_4798:HG4_PB_assemblyticsfalcon_26212;NumExactMatchSVs=13;ClusterMaxShiftDist=0.248062;ClusterMaxSizeDiff=0.248062;ClusterMaxEditDist=0.248062;PBcalls=17;Illcalls=28;TenXcalls=3;CGcalls=1;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=16;NumTechs=4;NumTechsExact=3;SVLEN=-116;DistBack=13954;DistForward=60534;DistMin=13954;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=38;REFWIDENED=8:96345250-96345403;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4018.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:1/1:1:8:0:44:./.:0:0:0:0:./.:2:28:./.:.:.:.:.:.
chr8	96836335	HG4_Ill_SVrefine2DISCOVARDovetail_6930	GTCTGGTGGAGAAGTGGAGAACCTTTATGTCTAGCTCAGGGATTGTAAATACACCAATCAGCACCCTATGTCTAGCTCAGGGTCTGTGAATGCACCAATCGACACTCTGTATCTAGCTAC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13063:HG3_PB_assemblyticsfalcon_26688:HG3_PB_SVrefine2Falcon1Dovetail_5863:HG4_PB_pbsv_9652:HG2_PB_pbsv_9627:HG3_PB_pbsv_9379:HG4_Ill_GATKHCSBGrefine_6683:HG4_Ill_250bpfermikitraw_12964:HG3_Ill_GATKHCSBGrefine_6471:HG2_Ill_GATKHCSBGrefine_6565:HG4_PB_assemblyticsfalcon_26218:HG4_PB_SVrefine2Falcon1Dovetail_5898:HG2_PB_SVrefine2Falcon1plusDovetail_11929:HG2_PB_assemblyticsfalcon_26771:HG4_PB_SVrefine2PBcRDovetail_4802:HG4_Ill_SVrefine2DISCOVARDovetail_6930:HG3_PB_SVrefine2PBcRDovetail_4389:HG3_Ill_SVrefine2DISCOVARDovetail_7154:HG2_PB_SVrefine2PBcRplusDovetail_11131;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13063:HG4_PB_SVrefine2PBcRDovetail_4802:HG4_Ill_SVrefine2DISCOVARDovetail_6930:HG3_PB_SVrefine2PBcRDovetail_4389:HG3_Ill_SVrefine2DISCOVARDovetail_7154:HG2_PB_SVrefine2PBcRplusDovetail_11131;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0251046;ClusterMaxSizeDiff=0.0251046;ClusterMaxEditDist=0.0336134;PBcalls=12;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-119;DistBack=10433;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=236;REFWIDENED=8:96836336-96836690;PctSeqSimilarity=0.9919;PctSizeSimilarity=1;PctRecOverlap=0.9;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=96;MatchId=4019.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:32:0|1:41:1:3:34:./.:0:0:0:0:0/1:32:18:./.:.:.:.:.:.
chr8	97098073	HG3_Ill_svaba_12214	TGAAAGAGAGGTATTAGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCTTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAATCCGGCCTGGGCTAAACAGCGGGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6862:HG4_PB_assemblyticsfalcon_26219:HG2_PB_assemblyticsPBcR_25984:HG3_PB_assemblyticsfalcon_26689:HG2_PB_assemblyticsfalcon_26772:HG4_Ill_Krunchall_13616:HG3_Ill_Krunchall_13031:HG2_Ill_Krunchall_13351:HG2_PB_pbsv_9628:HG3_PB_HySA_14408:HG2_PB_HySA_17303:HG4_Ill_MetaSV_5371:HG3_Ill_MetaSV_5318:HG2_Ill_tnscope_1093:HG2_Ill_MetaSV_5143:HG4_PB_pbsv_9653:HG4_PB_SVrefine2PBcRDovetail_4804:HG4_PB_SVrefine2Falcon1Dovetail_5899:HG4_PB_HySA_13973:HG4_Ill_svaba_12191:HG4_Ill_SVrefine2DISCOVARDovetail_6931:HG4_Ill_GATKHCSBGrefine_6684:HG4_10X_allpass_1868:HG3_PB_pbsv_9380:HG3_PB_SVrefine2PBcRDovetail_4390:HG3_PB_SVrefine2Falcon1Dovetail_5864:HG3_Ill_svaba_12214:HG3_Ill_SVrefine2DISCOVARDovetail_7155:HG3_Ill_GATKHCSBGrefine_6472:HG3_10X_allpass_1927:HG2_PB_SVrefine2PBcRplusDovetail_11132:HG2_PB_SVrefine2PB10Xhap12_7010:HG2_PB_SVrefine2Falcon1plusDovetail_11930:HG2_Ill_svaba_12072:HG2_Ill_manta_2758:HG2_Ill_breakscan11_1392:HG2_Ill_SVrefine2DISCOVARplusDovetail_13065:HG2_Ill_GATKHCSBGrefine_6566;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6862:HG4_PB_pbsv_9653:HG4_PB_SVrefine2PBcRDovetail_4804:HG4_PB_SVrefine2Falcon1Dovetail_5899:HG4_PB_HySA_13973:HG4_Ill_svaba_12191:HG4_Ill_SVrefine2DISCOVARDovetail_6931:HG4_Ill_GATKHCSBGrefine_6684:HG4_10X_allpass_1868:HG3_PB_pbsv_9380:HG3_PB_SVrefine2PBcRDovetail_4390:HG3_PB_SVrefine2Falcon1Dovetail_5864:HG3_Ill_svaba_12214:HG3_Ill_SVrefine2DISCOVARDovetail_7155:HG3_Ill_GATKHCSBGrefine_6472:HG3_10X_allpass_1927:HG2_PB_SVrefine2PBcRplusDovetail_11132:HG2_PB_SVrefine2PB10Xhap12_7010:HG2_PB_SVrefine2Falcon1plusDovetail_11930:HG2_Ill_svaba_12072:HG2_Ill_manta_2758:HG2_Ill_breakscan11_1392:HG2_Ill_SVrefine2DISCOVARplusDovetail_13065:HG2_Ill_GATKHCSBGrefine_6566;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0865801;ClusterMaxSizeDiff=0.0865801;ClusterMaxEditDist=0.0865801;PBcalls=17;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-352;DistBack=32117;DistForward=-338;DistMin=-338;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:97098074-97098440;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4020.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:0:36:2:29:./.:0:0:0:0:1/1:0:57:0/1:3:12:.:.:.
chr8	98200142	HG4_10X_allpass_1871	TAAAAGGAGGACTCACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCACAGTCCGGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_30671:HG2_10X_allpass_1611:HG2_Ill_Krunchall_13361:HG3_PB_assemblyticsfalcon_26698:HG4_PB_assemblyticsfalcon_26229:HG2_PB_assemblyticsPBcR_25995:HG4_PB_HySA_13984:HG4_Ill_MetaSV_5376:HG2_Ill_tnscope_1094:HG2_Ill_MetaSV_5145:HG4_PB_SVrefine2Falcon1Dovetail_5904:HG4_Ill_manta_2366:HG4_Ill_GATKHCSBGrefine_6688:HG4_10X_allpass_1871:HG3_PB_SVrefine2Falcon1Dovetail_5867:HG2_PB_pbsv_9632:HG2_PB_SVrefine2PBcRplusDovetail_11134:HG2_Ill_GATKHCSBGrefine_6569:HG2_10X_SVrefine210Xhap12_6866:HG4_PB_pbsv_9660:HG2_Ill_breakscan11_1393:HG4_Ill_Spiral_793:HG2_PB_SVrefine2PB10Xhap12_7011;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6866:HG2_Ill_GATKHCSBGrefine_6569:HG2_PB_SVrefine2PBcRplusDovetail_11134:HG2_PB_pbsv_9632:HG3_PB_SVrefine2Falcon1Dovetail_5867:HG4_10X_allpass_1871:HG4_Ill_GATKHCSBGrefine_6688:HG4_Ill_manta_2366:HG4_PB_SVrefine2Falcon1Dovetail_5904;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0917722;ClusterMaxSizeDiff=0.0917722;ClusterMaxEditDist=0.0917722;PBcalls=11;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=19786;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:98200143-98200479;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4021.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:35:0:1:23:./.:0:0:0:0:0/1:15:16:0/1:22:5:.:.:.
chr8	98595392	HG4_Ill_GATKHCSBGrefine_6689	AAAAAATAATAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5146:HG2_10X_allpass_1612:HG4_Ill_Krunchall_13633:HG3_Ill_Krunchall_13045:HG2_Ill_Krunchall_13365:HG2_PB_HySA_17317:HG2_PB_pbsv_9633:HG4_PB_pbsv_9661:HG4_PB_SVrefine2PBcRDovetail_4809:HG4_PB_SVrefine2Falcon1Dovetail_5905:HG4_Ill_svaba_12209:HG4_Ill_scalpel_8968:HG4_Ill_SVrefine2DISCOVARDovetail_6936:HG4_Ill_GATKHCSBGrefine_6689:HG4_10X_allpass_1872:HG3_PB_pbsv_9386:HG3_PB_SVrefine2PBcRDovetail_4395:HG3_PB_SVrefine2Falcon1Dovetail_5868:HG3_PB_HySA_14419:HG3_Ill_svaba_12227:HG3_Ill_scalpel_9330:HG3_Ill_SVrefine2DISCOVARDovetail_7164:HG3_Ill_MetaSV_5322:HG3_Ill_GATKHCSBGrefine_6478:HG3_10X_allpass_1931:HG2_PB_SVrefine2PBcRplusDovetail_11135:HG2_PB_SVrefine2PB10Xhap12_7012:HG2_PB_SVrefine2Falcon1plusDovetail_11932:HG2_Ill_svaba_12085:HG2_Ill_scalpel_9200:HG2_Ill_manta_2761:HG2_Ill_breakscan11_1394:HG2_Ill_SpiralSDKrefine_17147:HG2_Ill_SVrefine2DISCOVARplusDovetail_13069:HG2_Ill_GATKHCSBGrefine_6570:HG2_10X_SVrefine210Xhap12_6867:HG4_Ill_Spiral_794:HG4_Ill_MetaSV_5377:HG3_Ill_Spiral_10181:HG2_Ill_tnscope_1095:HG2_Ill_Spiral_683;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6867:HG2_Ill_GATKHCSBGrefine_6570:HG2_Ill_SVrefine2DISCOVARplusDovetail_13069:HG2_Ill_SpiralSDKrefine_17147:HG2_Ill_breakscan11_1394:HG2_Ill_manta_2761:HG2_Ill_scalpel_9200:HG2_Ill_svaba_12085:HG2_PB_SVrefine2Falcon1plusDovetail_11932:HG2_PB_SVrefine2PB10Xhap12_7012:HG2_PB_SVrefine2PBcRplusDovetail_11135:HG3_10X_allpass_1931:HG3_Ill_GATKHCSBGrefine_6478:HG3_Ill_MetaSV_5322:HG3_Ill_SVrefine2DISCOVARDovetail_7164:HG3_Ill_scalpel_9330:HG3_Ill_svaba_12227:HG3_PB_HySA_14419:HG3_PB_SVrefine2Falcon1Dovetail_5868:HG3_PB_SVrefine2PBcRDovetail_4395:HG3_PB_pbsv_9386:HG4_10X_allpass_1872:HG4_Ill_GATKHCSBGrefine_6689:HG4_Ill_SVrefine2DISCOVARDovetail_6936:HG4_Ill_scalpel_8968:HG4_Ill_svaba_12209:HG4_PB_SVrefine2Falcon1Dovetail_5905:HG4_PB_SVrefine2PBcRDovetail_4809;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0573152;ClusterMaxSizeDiff=0.0573152;ClusterMaxEditDist=0.0573152;PBcalls=12;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=89724;DistForward=-323;DistMin=-323;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=8:98595393-98595748;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4022.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:1:26:2:28:./.:0:0:0:0:1/1:0:60:0/1:3:9:.:.:.
chr8	98783448	HG4_PB_SVrefine2Falcon1Dovetail_5907	TAATTTCCTTAGTCGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6871:HG2_PB_pbsv_9635:HG3_PB_pbsv_9388:HG3_PB_assemblyticsfalcon_26703:HG2_PB_assemblyticsfalcon_26786:HG4_PB_assemblyticsfalcon_26232:HG2_PB_assemblyticsPBcR_25999:HG4_PB_pbsv_9665:HG4_Ill_MetaSV_5378:HG3_PB_HySA_14423:HG2_PB_HySA_17319:HG2_Ill_tnscope_1096:HG2_Ill_MetaSV_5147:HG4_PB_SVrefine2PBcRDovetail_4811:HG4_PB_SVrefine2Falcon1Dovetail_5907:HG4_Ill_scalpel_8969:HG4_Ill_SVrefine2DISCOVARDovetail_6940:HG4_Ill_Krunchall_13636:HG4_Ill_GATKHCSBGrefine_6690:HG4_10X_allpass_1873:HG3_PB_SVrefine2PBcRDovetail_4397:HG3_PB_SVrefine2Falcon1Dovetail_5870:HG3_Ill_MetaSV_5323:HG3_Ill_GATKHCSBGrefine_6480:HG3_10X_allpass_1932:HG2_PB_SVrefine2PBcRplusDovetail_11137:HG2_PB_SVrefine2PB10Xhap12_7014:HG2_PB_SVrefine2Falcon1plusDovetail_11934:HG2_Ill_scalpel_9203:HG2_Ill_manta_2762:HG2_Ill_breakscan11_1395:HG2_Ill_Krunchall_13367:HG2_Ill_GATKHCSBGrefine_6572:HG2_10X_allpass_1613;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6871:HG4_PB_SVrefine2PBcRDovetail_4811:HG4_PB_SVrefine2Falcon1Dovetail_5907:HG4_Ill_scalpel_8969:HG4_Ill_SVrefine2DISCOVARDovetail_6940:HG4_Ill_Krunchall_13636:HG4_Ill_GATKHCSBGrefine_6690:HG4_10X_allpass_1873:HG3_PB_SVrefine2PBcRDovetail_4397:HG3_PB_SVrefine2Falcon1Dovetail_5870:HG3_Ill_MetaSV_5323:HG3_Ill_GATKHCSBGrefine_6480:HG3_10X_allpass_1932:HG2_PB_SVrefine2PBcRplusDovetail_11137:HG2_PB_SVrefine2PB10Xhap12_7014:HG2_PB_SVrefine2Falcon1plusDovetail_11934:HG2_Ill_scalpel_9203:HG2_Ill_manta_2762:HG2_Ill_breakscan11_1395:HG2_Ill_Krunchall_13367:HG2_Ill_GATKHCSBGrefine_6572:HG2_10X_allpass_1613;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0764526;ClusterMaxSizeDiff=0.0764526;ClusterMaxEditDist=0.0764526;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=17933;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=8:98783449-98783793;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4023.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:20:0:12:./.:0:0:0:0:1/1:0:45:0/1:4:13:.:.:.
chr8	99085688	HG4_Ill_150bpfermikitraw_12436	GTATATATATATATATATATATATATGTATATATATATATATATATATATATATATGTATATATATA	G	20	PASS	ClusterIDs=HG4_Ill_GATKHCSBGrefine_6691:HG4_Ill_GATKHC_15655:HG2_Ill_GATKHCSBGrefine_6573:HG4_PB_pbsv_9666:HG4_Ill_svaba_12214:HG4_Ill_scalpel_8976:HG4_Ill_150bpfermikitraw_12436:HG2_Ill_150bpfermikitraw_12250:HG4_PB_HySA_13992:HG4_Ill_scalpel_8975:HG2_PB_assemblyticsfalcon_26793:HG4_Ill_GATKHC_15654;NumClusterSVs=12;ExactMatchIDs=HG4_Ill_150bpfermikitraw_12436:HG4_Ill_scalpel_8976:HG4_Ill_svaba_12214;NumExactMatchSVs=3;ClusterMaxShiftDist=0.393443;ClusterMaxSizeDiff=0.393443;ClusterMaxEditDist=0.393443;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=-19;DistForward=5680;DistMin=-19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=48;REFWIDENED=8:99085659-99085774;PctSeqSimilarity=0.9286;PctSizeSimilarity=0.8182;PctRecOverlap=0.403;SizeDiff=12;StartDistance=28;EndDistance=40;GTMatch=0;TruScore=71;MatchId=4024.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:24:3:3:21:./.:0:0:0:0:0/1:17:5:./.:.:.:.:.:.
chr8	99465140	HG2_PB_SVrefine2Falcon1plusDovetail_11936	TACCACGATCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCTTGACCTCAAGTGATCTGCTGGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCAAGCCTGGCCTAGACTTGATTTCTTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTCGAGACAGAGTCTCGCTCTGTCACCCAGGCTGGAGCGCAGTGGTGTGATCTTGGCCCACTGCAACCTTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACGGGCATGTGCC	T	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_6945:HG2_PB_pbsv_9637:HG4_PB_pbsv_9667:HG2_PB_HySA_17332:HG4_PB_HySA_13998:HG4_Ill_MetaSV_5379:HG4_Ill_GATKHCSBGrefine_6693:HG4_10X_allpass_1874:HG2_PB_assemblyticsfalcon_26798:HG2_PB_SVrefine2Falcon1plusDovetail_11936:HG2_Ill_scalpel_9211:HG2_Ill_GATKHCSBGrefine_6575:HG2_10X_allpass_1614:HG2_PB_SVrefine2Falcon1plusDovetail_11935;NumClusterSVs=14;ExactMatchIDs=HG2_10X_allpass_1614:HG2_Ill_GATKHCSBGrefine_6575:HG2_Ill_scalpel_9211:HG2_PB_SVrefine2Falcon1plusDovetail_11936:HG2_PB_assemblyticsfalcon_26798:HG4_10X_allpass_1874:HG4_Ill_GATKHCSBGrefine_6693:HG4_Ill_MetaSV_5379;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00913242;ClusterMaxSizeDiff=0.00913242;ClusterMaxEditDist=0.131498;PBcalls=7;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-329;DistForward=-255;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=290;REFWIDENED=8:99464986-99465603;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4025.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:18:0|1:40:2:3:16:./.:0:0:0:0:0/1:30:22:0/1:30:7:.:.:.
chr8	99838045	HG3_Ill_GATKHC_15575	CGCCCCGCCCCGCCCCCGGCCGCCCCGCCCCGCCCCCGGCCGCCCCGCCCCGCCCCCGGCCGCGCCGGCCGCCAGCCT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_9638:HG4_PB_HySA_14000:HG3_PB_assemblyticsfalcon_26712:HG3_Ill_manta_2257:HG3_Ill_Krunchall_13054:HG3_Ill_GATKHC_15575:HG3_Ill_GATKHCSBGrefine_6483:HG3_Ill_250bpfermikitraw_12689:HG3_Ill_150bpfermikitraw_12311:HG2_PB_assemblyticsfalcon_26799:HG2_Ill_GATKHC_15614:HG2_Ill_250bpfermikitraw_13059:HG3_PB_SVrefine2PBcRDovetail_4399:HG3_Ill_SVrefine2DISCOVARDovetail_7177:HG3_PB_pbsv_9391:HG4_PB_pbsv_9668:HG4_PB_SVrefine2PBcRDovetail_4812:HG4_Ill_SVrefine2DISCOVARDovetail_6950:HG4_Ill_150bpfermikitraw_12442;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13059:HG2_Ill_GATKHC_15614:HG2_PB_assemblyticsfalcon_26799:HG3_Ill_150bpfermikitraw_12311:HG3_Ill_250bpfermikitraw_12689:HG3_Ill_GATKHCSBGrefine_6483:HG3_Ill_GATKHC_15575:HG3_Ill_Krunchall_13054:HG3_Ill_manta_2257;NumExactMatchSVs=9;ClusterMaxShiftDist=0.297872;ClusterMaxSizeDiff=0.297872;ClusterMaxEditDist=0.312925;PBcalls=8;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=10;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-77;DistBack=17;DistForward=-57;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=104;REFWIDENED=8:99837944-99838124;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4026.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:38:./.:16:7:6:16:./.:0:0:0:0:0/1:21:17:./.:.:.:.:.:.
chr8	101890451	HG3_Ill_scalpel_9341	CAGCAGGGACATTCATTGAATCAAGAGCTATAGAAATGTAACTACACATGAACTTCTCAGTTTGTATAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6877:HG2_PB_HySA_17352:HG2_PB_pbsv_9641:HG4_PB_pbsv_9672:HG3_PB_pbsv_9396:HG3_PB_HySA_14444:HG4_PB_SVrefine2PBcRDovetail_4816:HG4_PB_SVrefine2Falcon1Dovetail_5910:HG4_PB_HySA_14011:HG4_Ill_svaba_12233:HG4_Ill_scalpel_8988:HG4_Ill_manta_2368:HG4_Ill_SVrefine2DISCOVARDovetail_6962:HG4_Ill_Krunchall_13658:HG4_Ill_GATKHCSBGrefine_6698:HG4_Ill_250bpfermikitraw_13001:HG3_PB_SVrefine2PBcRDovetail_4401:HG3_PB_SVrefine2Falcon1Dovetail_5873:HG3_Ill_svaba_12251:HG3_Ill_scalpel_9341:HG3_Ill_manta_2260:HG3_Ill_SVrefine2DISCOVARDovetail_7187:HG3_Ill_Krunchall_13065:HG3_Ill_GATKHCSBGrefine_6486:HG3_Ill_250bpfermikitraw_12701:HG3_Ill_150bpfermikitraw_12320:HG2_PB_SVrefine2Falcon1plusDovetail_11939:HG2_Ill_svaba_12117:HG2_Ill_manta_2766:HG2_Ill_SpiralSDKrefine_17168:HG2_Ill_SVrefine2DISCOVARplusDovetail_13084:HG2_Ill_GATKHCSBGrefine_6582:HG2_Ill_250bpfermikitraw_13072;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6877:HG4_PB_SVrefine2PBcRDovetail_4816:HG4_PB_SVrefine2Falcon1Dovetail_5910:HG4_PB_HySA_14011:HG4_Ill_svaba_12233:HG4_Ill_scalpel_8988:HG4_Ill_manta_2368:HG4_Ill_SVrefine2DISCOVARDovetail_6962:HG4_Ill_Krunchall_13658:HG4_Ill_GATKHCSBGrefine_6698:HG4_Ill_250bpfermikitraw_13001:HG3_PB_SVrefine2PBcRDovetail_4401:HG3_PB_SVrefine2Falcon1Dovetail_5873:HG3_Ill_svaba_12251:HG3_Ill_scalpel_9341:HG3_Ill_manta_2260:HG3_Ill_SVrefine2DISCOVARDovetail_7187:HG3_Ill_Krunchall_13065:HG3_Ill_GATKHCSBGrefine_6486:HG3_Ill_250bpfermikitraw_12701:HG3_Ill_150bpfermikitraw_12320:HG2_PB_SVrefine2Falcon1plusDovetail_11939:HG2_Ill_svaba_12117:HG2_Ill_manta_2766:HG2_Ill_SpiralSDKrefine_17168:HG2_Ill_SVrefine2DISCOVARplusDovetail_13084:HG2_Ill_GATKHCSBGrefine_6582:HG2_Ill_250bpfermikitraw_13072;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0437956;ClusterMaxSizeDiff=0.0437956;ClusterMaxEditDist=0.0444444;PBcalls=11;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-68;DistBack=11583;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=69;REFWIDENED=8:101890452-101890588;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4027.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:21:0|1:28:5:0:18:./.:0:0:0:0:0/1:25:29:./.:.:.:.:.:.
chr8	103130925	HG4_10X_allpass_1875	ATCTAAATAATTAAAATAACTTCTCTGCTGCTTTCCTCTTCTCCCCACCCCCTC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_9676:HG4_Ill_svaba_12242:HG4_Ill_manta_2370:HG4_Ill_SVrefine2DISCOVARDovetail_6969:HG4_Ill_Krunchall_13666:HG4_Ill_GATKHC_15695:HG4_Ill_GATKHCSBGrefine_6699:HG4_Ill_Cortex_3696:HG4_Ill_250bpfermikitraw_13008:HG4_Ill_150bpfermikitraw_12460:HG4_CG_vcfBeta_6246:HG4_10X_allpass_1875:HG2_Ill_svaba_12125:HG2_Ill_scalpel_9220:HG2_Ill_manta_2769:HG2_Ill_breakscan11_1397:HG2_Ill_SpiralSDKrefine_17170:HG2_Ill_Krunchall_13394:HG2_Ill_GATKHC_15644:HG2_Ill_GATKHCSBGrefine_6584:HG2_Ill_Cortex_8996:HG2_Ill_250bpfermikitraw_13077:HG2_Ill_150bpfermikitraw_12275:HG2_CG_vcfBeta_5539:HG2_10X_SVrefine210Xhap12_6880:HG2_PB_pbsv_9645:HG2_PB_HySA_17360;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6880:HG2_CG_vcfBeta_5539:HG2_Ill_150bpfermikitraw_12275:HG2_Ill_250bpfermikitraw_13077:HG2_Ill_Cortex_8996:HG2_Ill_GATKHCSBGrefine_6584:HG2_Ill_GATKHC_15644:HG2_Ill_Krunchall_13394:HG2_Ill_SpiralSDKrefine_17170:HG2_Ill_breakscan11_1397:HG2_Ill_manta_2769:HG2_Ill_scalpel_9220:HG2_Ill_svaba_12125:HG4_10X_allpass_1875:HG4_CG_vcfBeta_6246:HG4_Ill_150bpfermikitraw_12460:HG4_Ill_250bpfermikitraw_13008:HG4_Ill_Cortex_3696:HG4_Ill_GATKHCSBGrefine_6699:HG4_Ill_GATKHC_15695:HG4_Ill_Krunchall_13666:HG4_Ill_SVrefine2DISCOVARDovetail_6969:HG4_Ill_manta_2370:HG4_Ill_svaba_12242;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0185185;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.0555556;PBcalls=3;Illcalls=20;TenXcalls=2;CGcalls=2;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=2;CGexactcalls=2;HG2count=15;HG3count=0;HG4count=12;NumTechs=4;NumTechsExact=3;SVLEN=-53;DistBack=37151;DistForward=30;DistMin=30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=8:103130926-103130983;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4028.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:30:./.:10:21:30:4:./.:0:0:0:0:0/1:28:27:./.:.:.:.:.:.
chr8	105653750	HG4_Ill_Krunchall_13684	TTGGTTACATGTGTGAAATAAGTTAACAGTATTTTTTTTATCCAGTCAACCTCTAGATAGTCTTGCA	T	20	PASS	ClusterIDs=HG4_PB_HySA_14031:HG4_PB_assemblyticsfalcon_26270:HG3_PB_assemblyticsfalcon_26745:HG3_PB_pbsv_9408:HG4_PB_pbsv_9684:HG2_PB_pbsv_9655:HG2_PB_HySA_17380:HG4_Ill_svaba_12262:HG4_Ill_manta_2372:HG4_Ill_Krunchall_13684:HG4_Ill_GATKHCSBGrefine_6706:HG4_Ill_250bpfermikitraw_13023:HG3_Ill_svaba_12282:HG3_Ill_SVrefine2DISCOVARDovetail_7203:HG3_Ill_Krunchall_13094:HG3_Ill_GATKHCSBGrefine_6490:HG3_Ill_250bpfermikitraw_12734:HG3_Ill_150bpfermikitraw_12349:HG2_PB_assemblyticsPBcR_26078:HG2_Ill_svaba_12147:HG2_Ill_manta_2771:HG2_Ill_SpiralSDKrefine_17182:HG2_Ill_GATKHCSBGrefine_6589:HG2_Ill_250bpfermikitraw_13102;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13102:HG2_Ill_GATKHCSBGrefine_6589:HG2_Ill_SpiralSDKrefine_17182:HG2_Ill_manta_2771:HG2_Ill_svaba_12147:HG2_PB_assemblyticsPBcR_26078:HG3_Ill_150bpfermikitraw_12349:HG3_Ill_250bpfermikitraw_12734:HG3_Ill_GATKHCSBGrefine_6490:HG3_Ill_Krunchall_13094:HG3_Ill_SVrefine2DISCOVARDovetail_7203:HG3_Ill_svaba_12282:HG4_Ill_250bpfermikitraw_13023:HG4_Ill_GATKHCSBGrefine_6706:HG4_Ill_Krunchall_13684:HG4_Ill_manta_2372:HG4_Ill_svaba_12262;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.0615385;PBcalls=8;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=25816;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=66;REFWIDENED=8:105653751-105653882;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4029.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:28:0|1:34:0:0:30:./.:0:0:0:0:0/1:24:26:./.:.:.:.:.:.
chr8	106181395	HG4_Ill_manta_2373	GAAAGAATATGATACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGTGGAGCTTGCAAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6892:HG2_10X_allpass_1616:HG4_Ill_Spiral_797:HG4_Ill_Krunchall_13688:HG2_PB_HySA_17385:HG3_PB_assemblyticsfalcon_26749:HG2_Ill_Krunchall_13420:HG2_PB_assemblyticsfalcon_26837:HG2_PB_assemblyticsPBcR_26088:HG4_PB_pbsv_9685:HG2_PB_pbsv_9657:HG3_PB_pbsv_9410:HG2_Ill_breakscan11_1398:HG4_Ill_MetaSV_5385:HG2_Ill_tnscope_1100:HG2_Ill_MetaSV_5154:HG4_PB_assemblyticsfalcon_26273:HG4_PB_SVrefine2PBcRDovetail_4824:HG4_PB_SVrefine2Falcon1Dovetail_5917:HG4_PB_HySA_14036:HG4_Ill_scalpel_9010:HG4_Ill_manta_2373:HG4_Ill_SVrefine2DISCOVARDovetail_6987:HG4_Ill_GATKHCSBGrefine_6707:HG4_10X_allpass_1878:HG3_PB_SVrefine2Falcon1Dovetail_5880:HG3_Ill_scalpel_9365:HG3_Ill_manta_2264:HG3_Ill_SVrefine2DISCOVARDovetail_7205:HG3_Ill_MetaSV_5328:HG3_Ill_GATKHCSBGrefine_6492:HG3_10X_allpass_1937:HG2_PB_SVrefine2PBcRplusDovetail_11158:HG2_PB_SVrefine2PB10Xhap12_7021:HG2_PB_SVrefine2Falcon1plusDovetail_11947:HG2_Ill_scalpel_9241:HG2_Ill_manta_2772:HG2_Ill_SVrefine2DISCOVARplusDovetail_13107:HG2_Ill_GATKHCSBGrefine_6591;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6892:HG4_PB_assemblyticsfalcon_26273:HG4_PB_SVrefine2PBcRDovetail_4824:HG4_PB_SVrefine2Falcon1Dovetail_5917:HG4_PB_HySA_14036:HG4_Ill_scalpel_9010:HG4_Ill_manta_2373:HG4_Ill_SVrefine2DISCOVARDovetail_6987:HG4_Ill_GATKHCSBGrefine_6707:HG4_10X_allpass_1878:HG3_PB_SVrefine2Falcon1Dovetail_5880:HG3_Ill_scalpel_9365:HG3_Ill_manta_2264:HG3_Ill_SVrefine2DISCOVARDovetail_7205:HG3_Ill_MetaSV_5328:HG3_Ill_GATKHCSBGrefine_6492:HG3_10X_allpass_1937:HG2_PB_SVrefine2PBcRplusDovetail_11158:HG2_PB_SVrefine2PB10Xhap12_7021:HG2_PB_SVrefine2Falcon1plusDovetail_11947:HG2_Ill_scalpel_9241:HG2_Ill_manta_2772:HG2_Ill_SVrefine2DISCOVARplusDovetail_13107:HG2_Ill_GATKHCSBGrefine_6591;NumExactMatchSVs=24;ClusterMaxShiftDist=0.257426;ClusterMaxSizeDiff=0.257426;ClusterMaxEditDist=0.257426;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-329;DistForward=68;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:106181396-106181738;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4030.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:0:15:0:23:./.:0:0:0:0:1/1:0:30:./.:2:12:.:.:.
chr8	106670518	HG4_Ill_GATKHCSBGrefine_6711	TAGAAATCAAAGCAGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_684:HG4_Ill_Krunchall_13697:HG2_Ill_Krunchall_13425:HG2_10X_allpass_1617:HG2_PB_pbsv_9660:HG4_PB_pbsv_9687:HG4_PB_HySA_14043:HG4_Ill_MetaSV_5386:HG2_Ill_tnscope_1101:HG4_PB_SVrefine2PBcRDovetail_4826:HG4_PB_SVrefine2Falcon1Dovetail_5919:HG4_Ill_scalpel_9017:HG4_Ill_manta_2374:HG4_Ill_SVrefine2DISCOVARDovetail_6989:HG4_Ill_GATKHCSBGrefine_6711:HG4_10X_allpass_1879:HG2_PB_SVrefine2Falcon2Bionano_4511:HG2_Ill_manta_2773:HG2_Ill_SVrefine2DISCOVARplusDovetail_13108:HG2_Ill_MetaSV_5155:HG2_Ill_GATKHCSBGrefine_6593:HG2_10X_SVrefine210Xhap12_6893:HG2_Ill_breakscan11_1399;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6893:HG2_Ill_GATKHCSBGrefine_6593:HG2_Ill_MetaSV_5155:HG2_Ill_SVrefine2DISCOVARplusDovetail_13108:HG2_Ill_manta_2773:HG2_PB_SVrefine2Falcon2Bionano_4511:HG4_10X_allpass_1879:HG4_Ill_GATKHCSBGrefine_6711:HG4_Ill_SVrefine2DISCOVARDovetail_6989:HG4_Ill_manta_2374:HG4_Ill_scalpel_9017:HG4_PB_SVrefine2Falcon1Dovetail_5919:HG4_PB_SVrefine2PBcRDovetail_4826;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0608;ClusterMaxSizeDiff=0.0608;ClusterMaxEditDist=0.0608;PBcalls=6;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=4072;DistForward=-304;DistMin=-304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=8:106670519-106670854;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4031.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:0|1:27:1:8:27:./.:0:0:0:0:0/1:23:31:0/1:18:5:.:.:.
chr8	106703448	HG2_Ill_SVrefine2DISCOVARplusDovetail_13109	TCCCAAAGAGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACTACGGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGC	T	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_29295:HG2_PB_assemblyticsPBcR_26095:HG3_Ill_Krunchall_13102:HG2_Ill_Krunchall_13426:HG2_PB_pbsv_9661:HG2_PB_HySA_17393:HG3_Ill_MetaSV_5330:HG2_Ill_tnscope_1102:HG2_Ill_breakscan11_1400:HG4_PB_SVrefine2Falcon1Dovetail_5920:HG3_PB_pbsv_9412:HG3_Ill_scalpel_9370:HG3_Ill_manta_2265:HG3_Ill_SVrefine2DISCOVARDovetail_7206:HG3_Ill_GATKHCSBGrefine_6494:HG3_10X_allpass_1939:HG2_PB_SVrefine2PBcRplusDovetail_11159:HG2_PB_SVrefine2Falcon1plusDovetail_11948:HG2_Ill_scalpel_9247:HG2_Ill_SpiralSDKrefine_17187:HG2_Ill_SVrefine2DISCOVARplusDovetail_13109:HG2_Ill_MetaSV_5156:HG2_Ill_GATKHCSBGrefine_6594:HG2_10X_allpass_1618:HG2_10X_SVrefine210Xhap12_6894:HG3_Ill_Spiral_10223:HG2_Ill_Spiral_685:HG3_PB_SVrefine2PBcRDovetail_4408:HG2_PB_SVrefine2PB10Xhap12_7025;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6894:HG2_10X_allpass_1618:HG2_Ill_GATKHCSBGrefine_6594:HG2_Ill_MetaSV_5156:HG2_Ill_SVrefine2DISCOVARplusDovetail_13109:HG2_Ill_SpiralSDKrefine_17187:HG2_Ill_scalpel_9247:HG2_PB_SVrefine2Falcon1plusDovetail_11948:HG2_PB_SVrefine2PBcRplusDovetail_11159:HG3_10X_allpass_1939:HG3_Ill_GATKHCSBGrefine_6494:HG3_Ill_SVrefine2DISCOVARDovetail_7206:HG3_Ill_manta_2265:HG3_Ill_scalpel_9370:HG3_PB_pbsv_9412:HG4_PB_SVrefine2Falcon1Dovetail_5920;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0970266;ClusterMaxSizeDiff=0.0970266;ClusterMaxEditDist=0.0970266;PBcalls=10;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-316;DistForward=2407;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=8:106703449-106703790;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4032.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:0|1:25:2:1:32:./.:0:0:0:0:0/1:23:19:0/1:16:6:.:.:.
chr8	107511093	HG2_Ill_GATKHCSBGrefine_6598	TAAAGAATTAGGAGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCGGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_17402:HG4_PB_assemblyticsfalcon_26289:HG2_PB_assemblyticsfalcon_26847:HG2_PB_assemblyticsPBcR_26101:HG4_Ill_Krunchall_13706:HG3_Ill_Krunchall_13115:HG3_PB_assemblyticsfalcon_26766:HG2_PB_pbsv_9667:HG2_PB_HySA_17403:HG4_Ill_MetaSV_5388:HG2_Ill_tnscope_1103:HG2_Ill_MetaSV_5158:HG4_PB_pbsv_9692:HG4_PB_SVrefine2PBcRDovetail_4830:HG4_PB_SVrefine2Falcon1Dovetail_5925:HG4_Ill_scalpel_9024:HG4_Ill_manta_2375:HG4_Ill_SVrefine2DISCOVARDovetail_6993:HG4_Ill_GATKHCSBGrefine_6714:HG4_10X_allpass_1880:HG3_PB_SVrefine2Falcon1Dovetail_5887:HG3_Ill_manta_2267:HG3_Ill_SVrefine2DISCOVARDovetail_7209:HG3_Ill_GATKHCSBGrefine_6496:HG3_10X_allpass_1941:HG2_PB_SVrefine2PBcRplusDovetail_11161:HG2_PB_SVrefine2PB10Xhap12_7029:HG2_PB_SVrefine2Falcon2Bionano_4514:HG2_PB_SVrefine2Falcon1plusDovetail_11951:HG2_Ill_scalpel_9251:HG2_Ill_manta_2774:HG2_Ill_SVrefine2DISCOVARplusDovetail_13111:HG2_Ill_GATKHCSBGrefine_6598:HG2_10X_allpass_1619:HG2_10X_SVrefine210Xhap12_6896:HG2_Ill_breakscan11_1401:HG3_PB_pbsv_9415;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6896:HG2_10X_allpass_1619:HG2_Ill_GATKHCSBGrefine_6598:HG2_Ill_SVrefine2DISCOVARplusDovetail_13111:HG2_Ill_manta_2774:HG2_Ill_scalpel_9251:HG2_PB_SVrefine2Falcon1plusDovetail_11951:HG2_PB_SVrefine2Falcon2Bionano_4514:HG2_PB_SVrefine2PB10Xhap12_7029:HG2_PB_SVrefine2PBcRplusDovetail_11161:HG3_10X_allpass_1941:HG3_Ill_GATKHCSBGrefine_6496:HG3_Ill_SVrefine2DISCOVARDovetail_7209:HG3_Ill_manta_2267:HG3_PB_SVrefine2Falcon1Dovetail_5887:HG4_10X_allpass_1880:HG4_Ill_GATKHCSBGrefine_6714:HG4_Ill_SVrefine2DISCOVARDovetail_6993:HG4_Ill_manta_2375:HG4_Ill_scalpel_9024:HG4_PB_SVrefine2Falcon1Dovetail_5925:HG4_PB_SVrefine2PBcRDovetail_4830:HG4_PB_pbsv_9692;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0973312;ClusterMaxSizeDiff=0.0973312;ClusterMaxEditDist=0.0973312;PBcalls=16;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-327;DistForward=-310;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=8:107511094-107511434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4033.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:4:23:1:7:./.:0:0:0:0:1/1:0:25:./.:2:20:.:.:.
chr8	107532424	HG4_PB_SVrefine2PBcRDovetail_4831	GATTGAAATCTTTTTCTTTGATTTTTTAGTAGCCATTCCTAGAAATGATCATCAGGAGACCAGATTTCTAGTTCT	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_13119:HG3_PB_pbsv_9416:HG2_PB_pbsv_9668:HG4_PB_pbsv_9693:HG2_PB_HySA_17404:HG4_PB_HySA_14054:HG4_PB_SVrefine2PBcRDovetail_4831:HG4_Ill_svaba_12280:HG4_Ill_manta_2376:HG4_Ill_GATKHCSBGrefine_6715:HG4_Ill_250bpfermikitraw_13042:HG3_PB_SVrefine2Falcon1Dovetail_5888:HG3_Ill_svaba_12300:HG3_Ill_manta_2268:HG3_Ill_SVrefine2DISCOVARDovetail_7210:HG3_Ill_GATKHCSBGrefine_6497:HG3_Ill_250bpfermikitraw_12752:HG2_PB_SVrefine2PBcRplusDovetail_11162:HG2_PB_SVrefine2PB10Xhap12_7030:HG2_Ill_svaba_12162:HG2_Ill_scalpel_9252:HG2_Ill_manta_2775:HG2_Ill_SpiralSDKrefine_17194:HG2_Ill_GATKHCSBGrefine_6599;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13119:HG4_PB_SVrefine2PBcRDovetail_4831:HG4_Ill_svaba_12280:HG4_Ill_manta_2376:HG4_Ill_GATKHCSBGrefine_6715:HG4_Ill_250bpfermikitraw_13042:HG3_PB_SVrefine2Falcon1Dovetail_5888:HG3_Ill_svaba_12300:HG3_Ill_manta_2268:HG3_Ill_SVrefine2DISCOVARDovetail_7210:HG3_Ill_GATKHCSBGrefine_6497:HG3_Ill_250bpfermikitraw_12752:HG2_PB_SVrefine2PBcRplusDovetail_11162:HG2_PB_SVrefine2PB10Xhap12_7030:HG2_Ill_svaba_12162:HG2_Ill_scalpel_9252:HG2_Ill_manta_2775:HG2_Ill_SpiralSDKrefine_17194:HG2_Ill_GATKHCSBGrefine_6599;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0402685;ClusterMaxSizeDiff=0.0402685;ClusterMaxEditDist=0.0408163;PBcalls=9;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-74;DistBack=11710;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=8:107532425-107532573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4034.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:./.:18:7:10:21:./.:0:0:0:0:0/1:27:19:./.:.:.:.:.:.
chr8	107728555	HG4_Ill_GATKHCSBGrefine_6717	TAAAATACACACTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGTGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_14482:HG4_10X_allpass_1881:HG4_PB_pbsv_9695:HG4_PB_assemblyticsfalcon_26292:HG2_PB_assemblyticsfalcon_26853:HG2_PB_assemblyticsPBcR_26106:HG3_PB_assemblyticsfalcon_26770:HG4_Ill_Krunchall_13709:HG2_Ill_Krunchall_13437:HG3_PB_pbsv_9417:HG2_PB_pbsv_9670:HG4_Ill_MetaSV_5389:HG3_Ill_MetaSV_5332:HG2_Ill_tnscope_1104:HG2_Ill_MetaSV_5159:HG4_PB_SVrefine2Falcon1Dovetail_5926:HG4_Ill_SVrefine2DISCOVARDovetail_6995:HG4_Ill_GATKHCSBGrefine_6717:HG3_PB_SVrefine2PBcRDovetail_4411:HG3_PB_SVrefine2Falcon1Dovetail_5889:HG3_Ill_scalpel_9380:HG3_Ill_manta_2269:HG3_Ill_SVrefine2DISCOVARDovetail_7211:HG3_Ill_GATKHCSBGrefine_6498:HG3_10X_allpass_1942:HG2_PB_SVrefine2PBcRplusDovetail_11163:HG2_PB_SVrefine2PB10Xhap12_7031:HG2_PB_SVrefine2Falcon2Bionano_4515:HG2_PB_SVrefine2Falcon1plusDovetail_11952:HG2_PB_HySA_17407:HG2_Ill_scalpel_9255:HG2_Ill_manta_2776:HG2_Ill_SVrefine2DISCOVARplusDovetail_13114:HG2_Ill_GATKHCSBGrefine_6601:HG2_10X_allpass_1620:HG2_10X_SVrefine210Xhap12_6897:HG2_Ill_breakscan11_1402;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6897:HG2_10X_allpass_1620:HG2_Ill_GATKHCSBGrefine_6601:HG2_Ill_SVrefine2DISCOVARplusDovetail_13114:HG2_Ill_manta_2776:HG2_Ill_scalpel_9255:HG2_PB_HySA_17407:HG2_PB_SVrefine2Falcon1plusDovetail_11952:HG2_PB_SVrefine2Falcon2Bionano_4515:HG2_PB_SVrefine2PB10Xhap12_7031:HG2_PB_SVrefine2PBcRplusDovetail_11163:HG3_10X_allpass_1942:HG3_Ill_GATKHCSBGrefine_6498:HG3_Ill_SVrefine2DISCOVARDovetail_7211:HG3_Ill_manta_2269:HG3_Ill_scalpel_9380:HG3_PB_SVrefine2Falcon1Dovetail_5889:HG3_PB_SVrefine2PBcRDovetail_4411:HG4_Ill_GATKHCSBGrefine_6717:HG4_Ill_SVrefine2DISCOVARDovetail_6995:HG4_PB_SVrefine2Falcon1Dovetail_5926;NumExactMatchSVs=21;ClusterMaxShiftDist=0.10687;ClusterMaxSizeDiff=0.10687;ClusterMaxEditDist=0.10687;PBcalls=16;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=11968;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:107728556-107728900;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4035.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:0:30:1:20:./.:0:0:0:0:1/1:0:46:./.:1:19:.:.:.
chr8	108111791	HG4_PB_SVrefine2PBcRDovetail_4833	AAGGGCAAACTAGACTGAAGTAATTCAACCCAGACCTGCTTGATCCCAAAAGACTGGCAC	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_13129:HG2_PB_HySA_17412:HG4_PB_pbsv_9696:HG2_PB_assemblyticsfalcon_26857:HG2_PB_pbsv_9671:HG4_PB_SVrefine2PBcRDovetail_4833:HG4_PB_SVrefine2Falcon1Dovetail_5928:HG4_PB_HySA_14060:HG4_Ill_SVrefine2DISCOVARDovetail_7000:HG4_Ill_250bpfermikitraw_13050:HG3_PB_SVrefine2Falcon1Dovetail_5891:HG2_Ill_SpiralSDKrefine_17203;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13129:HG4_PB_SVrefine2PBcRDovetail_4833:HG4_PB_SVrefine2Falcon1Dovetail_5928:HG4_PB_HySA_14060:HG4_Ill_SVrefine2DISCOVARDovetail_7000:HG4_Ill_250bpfermikitraw_13050:HG3_PB_SVrefine2Falcon1Dovetail_5891:HG2_Ill_SpiralSDKrefine_17203;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.0512821;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=1;DistForward=884;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=119;REFWIDENED=8:108111792-108111969;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4036.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:34:./.:33:9:7:20:./.:0:0:0:0:0/1:11:15:./.:.:.:.:.:.
chr8	108120215	HG2_PB_assemblyticsfalcon_26859	TAAGAATGCATGAACATTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6899:HG4_10X_allpass_1882:HG3_10X_allpass_1943:HG3_Ill_manta_2270:HG2_Ill_manta_2777:HG2_Ill_MetaSV_5161:HG4_Ill_Spiral_798:HG3_Ill_Spiral_10237:HG2_Ill_Spiral_687:HG4_Ill_MetaSV_5390:HG3_Ill_MetaSV_5333:HG3_PB_assemblyticsfalcon_26773:HG2_PB_assemblyticsPBcR_26111:HG2_PB_pbsv_9672:HG4_PB_pbsv_9697:HG3_PB_pbsv_9418:HG2_PB_HySA_17413:HG2_Ill_tnscope_1105:HG2_Ill_MetaSV_5160:HG4_PB_assemblyticsfalcon_26298:HG4_PB_SVrefine2PBcRDovetail_4834:HG4_PB_SVrefine2Falcon1Dovetail_5929:HG4_Ill_GATKHCSBGrefine_6718:HG3_PB_SVrefine2Falcon1Dovetail_5892:HG3_Ill_GATKHCSBGrefine_6499:HG2_PB_assemblyticsfalcon_26859:HG2_PB_SVrefine2PBcRplusDovetail_11165:HG2_PB_SVrefine2PB10Xhap12_7033:HG2_PB_SVrefine2Falcon2Bionano_4516:HG2_PB_SVrefine2Falcon1plusDovetail_11953:HG2_Ill_Krunchall_13441:HG2_Ill_GATKHCSBGrefine_6602:HG2_10X_allpass_1621;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6899:HG4_PB_assemblyticsfalcon_26298:HG4_PB_SVrefine2PBcRDovetail_4834:HG4_PB_SVrefine2Falcon1Dovetail_5929:HG4_Ill_GATKHCSBGrefine_6718:HG3_PB_SVrefine2Falcon1Dovetail_5892:HG3_Ill_GATKHCSBGrefine_6499:HG2_PB_assemblyticsfalcon_26859:HG2_PB_SVrefine2PBcRplusDovetail_11165:HG2_PB_SVrefine2PB10Xhap12_7033:HG2_PB_SVrefine2Falcon2Bionano_4516:HG2_PB_SVrefine2Falcon1plusDovetail_11953:HG2_Ill_Krunchall_13441:HG2_Ill_GATKHCSBGrefine_6602:HG2_10X_allpass_1621;NumExactMatchSVs=15;ClusterMaxShiftDist=0.138365;ClusterMaxSizeDiff=0.138365;ClusterMaxEditDist=0.138365;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=7479;DistForward=-304;DistMin=-304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=8:108120216-108120556;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4037.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:41:0|1:30:0:0:32:./.:0:0:0:0:0/1:37:18:0/1:26:7:.:.:.
chr8	108373738	HG3_Ill_250bpfermikitraw_12763	CTATAGAATATATGTATATATTATATATCAATATAGAATATATGTATATATTATATATCAATATAGAATATATGTATATATTATATATCAA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_9419:HG3_PB_HySA_14486:HG2_PB_pbsv_9673:HG4_PB_pbsv_9700:HG2_PB_HySA_17415:HG4_Ill_svaba_12291:HG4_Ill_Krunchall_13716:HG4_Ill_GATKHC_15751:HG4_Ill_GATKHCSBGrefine_6719:HG4_Ill_250bpfermikitraw_13053:HG4_Ill_150bpfermikitraw_12507:HG3_Ill_svaba_12311:HG3_Ill_Krunchall_13125:HG3_Ill_GATKHC_15663:HG3_Ill_GATKHCSBGrefine_6500:HG3_Ill_250bpfermikitraw_12763:HG3_Ill_150bpfermikitraw_12381:HG3_10X_allpass_1944:HG2_Ill_svaba_12174:HG2_Ill_Krunchall_13445:HG2_Ill_GATKHC_15698:HG2_Ill_GATKHCSBGrefine_6603:HG2_Ill_150bpfermikitraw_12324:HG4_PB_SVrefine2PBcRDovetail_4836:HG4_PB_SVrefine2Falcon1Dovetail_5931:HG4_Ill_manta_2377:HG4_Ill_SVrefine2DISCOVARDovetail_7002:HG3_PB_SVrefine2PBcRDovetail_4412:HG3_PB_SVrefine2Falcon1Dovetail_5893:HG3_Ill_manta_2271:HG3_Ill_SVrefine2DISCOVARDovetail_7220:HG2_PB_SVrefine2PBcRplusDovetail_11166:HG2_PB_SVrefine2PB10Xhap12_7035:HG2_PB_SVrefine2Falcon2Bionano_4518:HG2_PB_SVrefine2Falcon1plusDovetail_11954:HG2_Ill_manta_2778:HG2_Ill_SVrefine2DISCOVARplusDovetail_13118:HG2_10X_SVrefine210Xhap12_6901;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12324:HG2_Ill_GATKHCSBGrefine_6603:HG2_Ill_GATKHC_15698:HG2_Ill_Krunchall_13445:HG2_Ill_svaba_12174:HG3_10X_allpass_1944:HG3_Ill_150bpfermikitraw_12381:HG3_Ill_250bpfermikitraw_12763:HG3_Ill_GATKHCSBGrefine_6500:HG3_Ill_GATKHC_15663:HG3_Ill_Krunchall_13125:HG3_Ill_svaba_12311:HG4_Ill_150bpfermikitraw_12507:HG4_Ill_250bpfermikitraw_13053:HG4_Ill_GATKHCSBGrefine_6719:HG4_Ill_GATKHC_15751:HG4_Ill_Krunchall_13716:HG4_Ill_svaba_12291;NumExactMatchSVs=18;ClusterMaxShiftDist=0.021978;ClusterMaxSizeDiff=0.021978;ClusterMaxEditDist=0.0444444;PBcalls=13;Illcalls=23;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-90;DistBack=-7341;DistForward=6711;DistMin=-7341;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=94;REFWIDENED=8:108373721-108373904;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4038.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:50:1/1:3:29:3:20:./.:0:0:0:0:1/1:0:42:./.:.:.:.:.:.
chr8	108380678	HG4_Ill_MetaSV_5391	GTATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTATATTCCTTATACTTATTTATAAGTA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_9701:HG4_Ill_Krunchall_13717:HG3_Ill_Krunchall_13126:HG2_Ill_Krunchall_13446:HG4_Ill_Spiral_799:HG2_Ill_Spiral_688:HG2_PB_HySA_17416:HG3_PB_pbsv_9420:HG2_PB_pbsv_9674:HG2_Ill_tnscope_1106:HG2_Ill_MetaSV_5162:HG4_Ill_manta_2378:HG4_Ill_MetaSV_5391:HG4_Ill_GATKHCSBGrefine_6720:HG4_10X_allpass_1883:HG3_PB_SVrefine2Falcon1Dovetail_5894:HG3_Ill_manta_2272:HG3_Ill_GATKHCSBGrefine_6501:HG3_10X_allpass_1945:HG2_PB_SVrefine2PBcRplusDovetail_11167:HG2_PB_SVrefine2PB10Xhap12_7036:HG2_PB_SVrefine2Falcon2Bionano_4519:HG2_PB_SVrefine2Falcon1plusDovetail_11955:HG2_Ill_manta_2779:HG2_Ill_breakscan11_1403:HG2_Ill_SpiralSDKrefine_17207:HG2_Ill_SVrefine2DISCOVARplusDovetail_13119:HG2_Ill_GATKHCSBGrefine_6604:HG2_10X_allpass_1622:HG2_10X_SVrefine210Xhap12_6902;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6902:HG2_10X_allpass_1622:HG2_Ill_GATKHCSBGrefine_6604:HG2_Ill_SVrefine2DISCOVARplusDovetail_13119:HG2_Ill_SpiralSDKrefine_17207:HG2_Ill_breakscan11_1403:HG2_Ill_manta_2779:HG2_PB_SVrefine2Falcon1plusDovetail_11955:HG2_PB_SVrefine2Falcon2Bionano_4519:HG2_PB_SVrefine2PB10Xhap12_7036:HG2_PB_SVrefine2PBcRplusDovetail_11167:HG3_10X_allpass_1945:HG3_Ill_GATKHCSBGrefine_6501:HG3_Ill_manta_2272:HG3_PB_SVrefine2Falcon1Dovetail_5894:HG4_10X_allpass_1883:HG4_Ill_GATKHCSBGrefine_6720:HG4_Ill_MetaSV_5391:HG4_Ill_manta_2378;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00749064;ClusterMaxSizeDiff=0.00749064;ClusterMaxEditDist=0.00750939;PBcalls=9;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-400;DistBack=-151;DistForward=-372;DistMin=-372;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=43;REFWIDENED=8:108380679-108381121;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4039.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:32:1/1:3:19:3:14:./.:0:0:0:0:1/1:0:33:0/1:2:10:.:.:.
chr8	108563580	HG4_Ill_250bpfermikitraw_13056	ACACATATGTATATATACGTATATACGCACATATGTATATATACGTATATACGCACATATGTATATATACGTATATACG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_9422:HG4_Ill_GATKHC_15754:HG3_PB_assemblyticsfalcon_26780:HG2_PB_assemblyticsPBcR_26116:HG4_Ill_GATKHCSBGrefine_6721:HG2_PB_HySA_17419:HG3_Ill_GATKHC_15667:HG3_Ill_GATKHCSBGrefine_6502:HG2_Ill_GATKHC_15701:HG2_Ill_GATKHCSBGrefine_6605:HG2_Ill_SpiralSDKrefine_17209:HG4_PB_pbsv_9704:HG4_Ill_svaba_12293:HG4_Ill_MetaSV_5392:HG4_Ill_Krunchall_13719:HG4_Ill_250bpfermikitraw_13056:HG4_Ill_150bpfermikitraw_12510:HG3_Ill_svaba_12314:HG3_Ill_Krunchall_13130:HG3_Ill_250bpfermikitraw_12767:HG3_Ill_150bpfermikitraw_12385:HG2_Ill_svaba_12176:HG2_Ill_Krunchall_13448:HG2_Ill_250bpfermikitraw_13135:HG2_Ill_150bpfermikitraw_12326:HG2_PB_pbsv_9676;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12326:HG2_Ill_250bpfermikitraw_13135:HG2_Ill_Krunchall_13448:HG2_Ill_svaba_12176:HG3_Ill_150bpfermikitraw_12385:HG3_Ill_250bpfermikitraw_12767:HG3_Ill_Krunchall_13130:HG3_Ill_svaba_12314:HG4_Ill_150bpfermikitraw_12510:HG4_Ill_250bpfermikitraw_13056:HG4_Ill_Krunchall_13719:HG4_Ill_MetaSV_5392:HG4_Ill_svaba_12293;NumExactMatchSVs=13;ClusterMaxShiftDist=0.201342;ClusterMaxSizeDiff=0.174497;ClusterMaxEditDist=0.322148;PBcalls=6;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=8235;DistForward=51;DistMin=51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=167;REFWIDENED=8:108563547-108563791;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4040.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:36:0|1:14:1:4:32:./.:0:0:0:0:0/1:22:25:./.:.:.:.:.:.
chr8	109730161	HG4_10X_allpass_1884	TCTGACTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1404:HG4_PB_assemblyticsfalcon_26310:HG2_PB_assemblyticsfalcon_26872:HG2_PB_assemblyticsPBcR_26123:HG4_Ill_Krunchall_13730:HG2_Ill_Krunchall_13460:HG4_Ill_Spiral_801:HG4_Ill_MetaSV_5393:HG2_Ill_tnscope_1107:HG2_Ill_MetaSV_5163:HG4_PB_pbsv_9706:HG4_PB_SVrefine2PBcRDovetail_4839:HG4_PB_SVrefine2Falcon1Dovetail_5934:HG4_Ill_scalpel_9035:HG4_Ill_manta_2379:HG4_Ill_SVrefine2DISCOVARDovetail_7007:HG4_Ill_GATKHCSBGrefine_6722:HG4_10X_allpass_1884:HG3_PB_pbsv_9425:HG3_PB_SVrefine2Falcon1Dovetail_5897:HG3_Ill_scalpel_9394:HG3_Ill_manta_2273:HG3_Ill_MetaSV_5335:HG3_Ill_GATKHCSBGrefine_6505:HG3_10X_allpass_1946:HG2_PB_pbsv_9678:HG2_PB_SVrefine2PBcRplusDovetail_11170:HG2_PB_SVrefine2Falcon2Bionano_4521:HG2_PB_SVrefine2Falcon1plusDovetail_11959:HG2_Ill_scalpel_9268:HG2_Ill_manta_2780:HG2_Ill_SpiralSDKrefine_17216:HG2_Ill_GATKHCSBGrefine_6607:HG2_10X_allpass_1623:HG2_10X_SVrefine210Xhap12_6905;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6905:HG2_10X_allpass_1623:HG2_Ill_GATKHCSBGrefine_6607:HG2_Ill_SpiralSDKrefine_17216:HG2_Ill_manta_2780:HG2_Ill_scalpel_9268:HG2_PB_SVrefine2Falcon1plusDovetail_11959:HG2_PB_SVrefine2Falcon2Bionano_4521:HG2_PB_SVrefine2PBcRplusDovetail_11170:HG2_PB_pbsv_9678:HG3_10X_allpass_1946:HG3_Ill_GATKHCSBGrefine_6505:HG3_Ill_MetaSV_5335:HG3_Ill_manta_2273:HG3_Ill_scalpel_9394:HG3_PB_SVrefine2Falcon1Dovetail_5897:HG3_PB_pbsv_9425:HG4_10X_allpass_1884:HG4_Ill_GATKHCSBGrefine_6722:HG4_Ill_SVrefine2DISCOVARDovetail_7007:HG4_Ill_manta_2379:HG4_Ill_scalpel_9035:HG4_PB_SVrefine2Falcon1Dovetail_5934:HG4_PB_SVrefine2PBcRDovetail_4839:HG4_PB_pbsv_9706;NumExactMatchSVs=25;ClusterMaxShiftDist=0.084507;ClusterMaxSizeDiff=0.084507;ClusterMaxEditDist=0.084507;PBcalls=12;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-323;DistForward=-303;DistMin=-323;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:109730162-109730500;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4041.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:28:0|1:16:3:2:15:./.:0:0:0:0:0/1:26:19:0/1:32:15:.:.:.
chr8	110234719	HG3_Ill_GATKHCSBGrefine_6507	CGAGTGTGGCTGATTCTTGCAGATTAAGCCAACCCTAAGCTTCCTGTTTCATGGATAAAGGCCATGTTAATATCCATAGCATAAATGAAGTCTAGGGAACTCCAAGGCTACTGACAGAAGCAGGGAGGCACAGGGGTCATCTGTAGGCATAGGTGAGAATGATAATGCCTATTCTCTAGGCCCTCACTACTTCAGGGGTGCAAGCCGCTTTGGCACTCATGGCAGGACCTGCCAAGGTCACCAGGACTTGGGGATGCAAGGATGGAAAAAGAAAACAGGATGCTCTTCCCTTTCTCCCTAACATACCCTGAGTATCTGCTAGGAAGAGAAGGGA	C	20	PASS	ClusterIDs=HG3_Ill_Krunchall_13145:HG3_10X_allpass_1947:HG3_PB_HySA_14506:HG3_Ill_MetaSV_5336:HG2_Ill_tnscope_1108:HG2_Ill_MetaSV_5165:HG3_PB_pbsv_9430:HG3_PB_assemblyticsfalcon_26791:HG3_PB_SVrefine2PBcRDovetail_4417:HG3_PB_SVrefine2Falcon1Dovetail_5902:HG3_Ill_manta_2275:HG3_Ill_SVrefine2DISCOVARDovetail_7228:HG3_Ill_GATKHCSBGrefine_6507:HG2_PB_pbsv_9682:HG2_PB_assemblyticsfalcon_26879:HG2_PB_assemblyticsPBcR_26128:HG2_PB_SVrefine2PBcRplusDovetail_11173:HG2_PB_SVrefine2PB10Xhap12_7042:HG2_PB_SVrefine2Falcon2Bionano_4524:HG2_PB_SVrefine2Falcon1plusDovetail_11963:HG2_Ill_scalpel_9273:HG2_Ill_manta_2781:HG2_Ill_breakscan11_1405:HG2_Ill_SpiralSDKrefine_17220:HG2_Ill_SVrefine2DISCOVARplusDovetail_13126:HG2_Ill_GATKHCSBGrefine_6610:HG2_10X_allpass_1624:HG2_10X_SVrefine210Xhap12_6907;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6907:HG2_10X_allpass_1624:HG2_Ill_GATKHCSBGrefine_6610:HG2_Ill_SVrefine2DISCOVARplusDovetail_13126:HG2_Ill_SpiralSDKrefine_17220:HG2_Ill_breakscan11_1405:HG2_Ill_manta_2781:HG2_Ill_scalpel_9273:HG2_PB_SVrefine2Falcon1plusDovetail_11963:HG2_PB_SVrefine2Falcon2Bionano_4524:HG2_PB_SVrefine2PB10Xhap12_7042:HG2_PB_SVrefine2PBcRplusDovetail_11173:HG2_PB_assemblyticsPBcR_26128:HG2_PB_assemblyticsfalcon_26879:HG2_PB_pbsv_9682:HG3_Ill_GATKHCSBGrefine_6507:HG3_Ill_SVrefine2DISCOVARDovetail_7228:HG3_Ill_manta_2275:HG3_PB_SVrefine2Falcon1Dovetail_5902:HG3_PB_SVrefine2PBcRDovetail_4417:HG3_PB_assemblyticsfalcon_26791:HG3_PB_pbsv_9430;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0266667;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.0266667;PBcalls=12;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=-483;DistForward=2486;DistMin=-483;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:110234720-110235052;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4042.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:18:0|1:27:0:2:19:./.:0:0:0:0:0/1:47:26:0/1:25:10:.:.:.
chr8	110510307	HG3_Ill_scalpel_9399	TCATGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1406:HG2_10X_allpass_1625:HG3_Ill_Krunchall_13149:HG2_Ill_Krunchall_13466:HG2_PB_pbsv_9686:HG2_PB_HySA_17440:HG2_Ill_MetaSV_5167:HG3_PB_pbsv_9434:HG3_PB_assemblyticsfalcon_26795:HG3_PB_SVrefine2Falcon1Dovetail_5906:HG3_Ill_svaba_12329:HG3_Ill_scalpel_9399:HG3_Ill_manta_2276:HG3_Ill_MetaSV_5339:HG3_Ill_GATKHCSBGrefine_6509:HG3_10X_allpass_1948:HG2_PB_SVrefine2PB10Xhap12_7044:HG2_PB_SVrefine2Falcon2Bionano_4527:HG2_Ill_svaba_12197:HG2_Ill_scalpel_9276:HG2_Ill_SpiralSDKrefine_17222:HG2_Ill_GATKHCSBGrefine_6613:HG2_10X_SVrefine210Xhap12_6908;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6908:HG2_Ill_GATKHCSBGrefine_6613:HG2_Ill_SpiralSDKrefine_17222:HG2_Ill_scalpel_9276:HG2_Ill_svaba_12197:HG2_PB_SVrefine2Falcon2Bionano_4527:HG2_PB_SVrefine2PB10Xhap12_7044:HG3_10X_allpass_1948:HG3_Ill_GATKHCSBGrefine_6509:HG3_Ill_MetaSV_5339:HG3_Ill_manta_2276:HG3_Ill_scalpel_9399:HG3_Ill_svaba_12329:HG3_PB_SVrefine2Falcon1Dovetail_5906:HG3_PB_assemblyticsfalcon_26795:HG3_PB_pbsv_9434;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0604134;ClusterMaxSizeDiff=0.0604134;ClusterMaxEditDist=0.0604134;PBcalls=7;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=10187;DistForward=4867;DistMin=4867;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=8:110510308-110510642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4043.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:19:0|1:29:0:1:20:./.:0:0:0:0:0/1:27:22:0/1:27:9:.:.:.
chr8	112168225	HG3_PB_SVrefine2PBcRDovetail_4420	TGGAATCTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGCGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6912:HG2_PB_HySA_17445:HG2_10X_allpass_1626:HG4_PB_assemblyticsfalcon_26323:HG3_PB_assemblyticsfalcon_26799:HG2_PB_assemblyticsfalcon_26890:HG2_PB_assemblyticsPBcR_26139:HG3_10X_allpass_1950:HG3_Ill_Krunchall_13154:HG2_Ill_breakscan11_1407:HG2_PB_pbsv_9687:HG4_PB_pbsv_9709:HG4_Ill_MetaSV_5395:HG3_Ill_MetaSV_5340:HG2_Ill_tnscope_1109:HG4_PB_SVrefine2PBcRDovetail_4841:HG4_PB_SVrefine2Falcon1Dovetail_5938:HG4_Ill_scalpel_9044:HG4_Ill_SVrefine2DISCOVARDovetail_7013:HG4_Ill_GATKHCSBGrefine_6727:HG4_10X_allpass_1885:HG3_PB_pbsv_9435:HG3_PB_SVrefine2PBcRDovetail_4420:HG3_PB_SVrefine2Falcon1Dovetail_5907:HG3_PB_HySA_14516:HG3_Ill_scalpel_9403:HG3_Ill_GATKHCSBGrefine_6510:HG2_PB_SVrefine2PBcRplusDovetail_11175:HG2_PB_SVrefine2Falcon1plusDovetail_11967:HG2_Ill_SpiralSDKrefine_17225:HG2_Ill_MetaSV_5168:HG2_Ill_GATKHCSBGrefine_6614;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6912:HG4_PB_SVrefine2PBcRDovetail_4841:HG4_PB_SVrefine2Falcon1Dovetail_5938:HG4_Ill_scalpel_9044:HG4_Ill_SVrefine2DISCOVARDovetail_7013:HG4_Ill_GATKHCSBGrefine_6727:HG4_10X_allpass_1885:HG3_PB_pbsv_9435:HG3_PB_SVrefine2PBcRDovetail_4420:HG3_PB_SVrefine2Falcon1Dovetail_5907:HG3_PB_HySA_14516:HG3_Ill_scalpel_9403:HG3_Ill_GATKHCSBGrefine_6510:HG2_PB_SVrefine2PBcRplusDovetail_11175:HG2_PB_SVrefine2Falcon1plusDovetail_11967:HG2_Ill_SpiralSDKrefine_17225:HG2_Ill_MetaSV_5168:HG2_Ill_GATKHCSBGrefine_6614;NumExactMatchSVs=18;ClusterMaxShiftDist=0.141274;ClusterMaxSizeDiff=0.141274;ClusterMaxEditDist=0.141274;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-353;DistBack=30518;DistForward=-345;DistMin=-345;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=8:112168226-112168591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4044.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:55:0|1:26:3:0:49:./.:0:0:0:0:0/1:30:20:0/1:32:8:.:.:.
chr8	112294051	HG2_Ill_MetaSV_5169	TGAGAAAAATAAATTATTTTGTGGGGAAAAATAATACAACTTGTACTGAGAAAGCTTGGTTTTGATATACAGCTACATTCCTAACTAGTGTTAAGTTAGTTGCTTAAACTCAACTAAATCTAAATCATTTTAAGTTAAGACATTTATAAAGGCTAACTTTCATGAGTTTTATAAGGATAATTGTGTAAATATGAGTGAATGAACATGCAAATATTTGGAACTAAATAAATTCTTTGCAGGCAGAAAAGTGATTTTTAAATTATTTTTATTAGAATGATAATATAATAAAATAAATTTCTAAATTATGTCAAATTTTTTAGGAGAAAAAGCATTGAAGGTTTTATGTAACACATTAATAAAAACTACCTAATAAATACCACTAATAAAATACAACTAATAAAAACTTTGAAAAGAAGCAAATAGACTTGCTAATTTATAACATTAAAAGTGTCCCTTTAGTTATTATAAGATAATGAGTAACAAATAAATGCAAGCAATTTATTAATTTGAATACTGATAACACATGTAATACTCTGATAGCTTTTAACTGTAGAAGAGAAAATACTGGCAATGCATGTCCAAAACTGAGCTCTATTACCATGGTATTCCCAGTGATATTCTCAGTGGTATTACCATCCCTTTTGTAAGATGAAATTGCATACATTAAATTTATAGCAGAGATATATACTTAAATATAAACTACTAGATAATCTAAAATAATAGCAATTACAGATGGAATGTTCAGTATATTGTCTACCCTTTTGTTCATAAACTTTTAATGAGATTTCCTCGGGGGTATGATAGACACATTTTCTAAATTTGTAAAGAATGTCTGAATAGGTGAATATGCACTTACCATAATTGTGGAAGAAAATAAGATTATAGCCATTTATATCTTCTGGAATTAAGAAAAACCATATTGAGATCCAGAAACAACCTTAATCTAGGTAGGATCGTTGTACTCTAACATAATATCCAGGCCTCAGTTTATTTCTTTATAAATTAGATTAATGTTATTTGCCTCAGAACTGCAAAGGTTCAGAACCTTAGCAAGAACAGAGTAGAATTACCAGAATAATTTACGTTTCATTAAATATTAGTCTTGCATTTATTTTGTTGTTGTTGTTTCTATTTATTTTTGTCTTTCTCACCTTCAGTGGCATAATAAGGAATCACTACATTTTCTGATAATGAGGATTGCCGTACTCATTCTCCGTAAGTACATGCCTGGCTTCATGTTACTATTTTCTCCCTCTGCCCATAATATAGAGCATCTTGAAAGGTCTAGGTCAGTAATTCCCATAATTAGTGCTCATAGGAATCACATAAGGAACTTGCTAAATATTCAGATATTTAGGGCTTACCTTCAAGTATTCTGATTGTGTGAAGATGGCACAAAGAACTTGTGTTTTAATAAGTACCCTAGACAGCATTAAAGCAAAACACACTGCTGTTCATCTTTAGAAATAAGTATTGGAACTATGATTCAGGCCACAATTTGTTGGGATAGGAAAAAATATAAGGAACATAACTTACTAATATTAAGAAAGTCGGGCCGGGCACGGTGGCTCATGTCTGAAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGAAGATGGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAACACAAAAAAATTAGCCGGGCGTGACGGCGAGCGCCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAACCGAGATCACGCCACTGCACTCCAGCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAGAAAGTCAGTATGTGTCTTCTTGTATGCAGGTTTTGAGGAAAATCATCCAATAGCTGACATACTAGGTCAAAACAGAAAATTATGAAAATCTTAGACTAAAGGGTTCTGTGTTTTGCAGGGAAGTTCTGCCACCACTTAGTTTGGTTTCCTGTACCTCTAATTCTTCCATCCTGTGTACTAGTGTTACTATTCGATAAACATAAGTATCCTAGGCTTCAGTCATATTTATGGCACATCATTTACATTTACTTTTTACATTCCCATGCTTTTTAGGACTCTATCCCTTCTTCCATGAATGACGGTTCCTTCTTACGTCTTCTATTCACTCTTCAATATCCAGGTAAAACATCTTCCATGAGTCTTTCAAAAATTTTTCCATGCAGATTTAGTTGCTCCTACCTTTGTATTTCTCTAACATCCCCATAAGTCCTACAAGGTTTTACTGCATTTTTTTATATTATATACTTCTGTTATATATAAGCACATGTAATACAAAATATATGTAGTATAAGTATTATACATACTATATATAAATATATATACTGTGCACCATGCACCTGGAAAAGATGCAGACTCTATCTATCTATCTATCTATCTTAATATATACAGATACATACAGAAATACATAGTATATATAATAATATAGTATGTATAAAATATATATAAGTATTATATACTTCTAGTCTATAAATATTCAACATAATACTTATACTACATATTCTATATAAATATGCACACATATGTGTATTAGTCCTTTCTCACACTGCTAATAAAGACATACCCAAGACTAGGTAATTTATAAAGGAAAGAGGTTTAATTGACCCACAGCTCAACATGGCTTGGGAGGCATCAGGAAACTTACAATCGTGGCAGAAGGAGAGGCGACCATGTCCTTCTTCACATGGCAGCAGAAGAGAAAATAATGAATGCCCAGCTAAGGGGGAGGCCCTTTTTAAAACCATCAGATCTCATGAAAACTAACTCACTATCACAAGAACAGAATGGGGGTAATCACCCTTATGATTCAATTATCTCCTGCTGGTCCCCCGCACAACACATGGATATTATGAAAACTACAATTCAAAATGACATTTGGGTGGGGACACAGCCAAACCATATCATTTCACCCATGGCCTTTCCCAAATCTCATGTCCTCACAATCATGCTCTTCCAACAGTCTCCCAAAGTCTTAACTCGTTCCAGAATTAACCCAAAAGTCCAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_9688:HG3_PB_pbsv_9436:HG3_10X_allpass_1951:HG2_10X_allpass_1627:HG2_Ill_tnscope_1110:HG4_PB_assemblyticsfalcon_26325:HG4_PB_SVrefine2Falcon1Dovetail_5939:HG3_PB_assemblyticsfalcon_26800:HG3_PB_SVrefine2PBcRDovetail_4421:HG3_PB_SVrefine2Falcon1Dovetail_5908:HG3_Ill_SVrefine2DISCOVARDovetail_7236:HG3_Ill_GATKHCSBGrefine_6511:HG2_PB_assemblyticsfalcon_26891:HG2_PB_assemblyticsPBcR_26140:HG2_PB_SVrefine2PBcRplusDovetail_11176:HG2_PB_SVrefine2Falcon2Bionano_4529:HG2_PB_SVrefine2Falcon1plusDovetail_11968:HG2_Ill_SpiralSDKrefine_17226:HG2_Ill_MetaSV_5169:HG2_10X_SVrefine210Xhap12_6913:HG3_Ill_Krunchall_13155:HG2_Ill_Krunchall_13470:HG3_Ill_MetaSV_5341;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6913:HG2_Ill_MetaSV_5169:HG2_Ill_SpiralSDKrefine_17226:HG2_PB_SVrefine2Falcon1plusDovetail_11968:HG2_PB_SVrefine2Falcon2Bionano_4529:HG2_PB_SVrefine2PBcRplusDovetail_11176:HG2_PB_assemblyticsPBcR_26140:HG2_PB_assemblyticsfalcon_26891:HG3_Ill_GATKHCSBGrefine_6511:HG3_Ill_SVrefine2DISCOVARDovetail_7236:HG3_PB_SVrefine2Falcon1Dovetail_5908:HG3_PB_SVrefine2PBcRDovetail_4421:HG3_PB_assemblyticsfalcon_26800:HG4_PB_SVrefine2Falcon1Dovetail_5939:HG4_PB_assemblyticsfalcon_26325;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00129534;ClusterMaxSizeDiff=0.00129534;ClusterMaxEditDist=0.00388601;PBcalls=12;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-3088;DistBack=17285;DistForward=60403;DistMin=17285;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:112294052-112297140;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4045.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:86:0|1:36:0:1:43:./.:0:0:0:0:0/1:57:17:0/1:241:103:3233:.:.
chr8	113085423	HG4_Ill_GATKHCSBGrefine_6728	TAAAAATAACTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAAACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1408:HG4_PB_pbsv_9710:HG4_Ill_Krunchall_13744:HG3_PB_pbsv_9439:HG3_Ill_Krunchall_13161:HG2_Ill_Krunchall_13476:HG4_PB_assemblyticsfalcon_26329:HG3_PB_assemblyticsfalcon_26804:HG2_PB_assemblyticsfalcon_26893:HG2_PB_assemblyticsPBcR_26144:HG4_PB_HySA_14088:HG3_PB_HySA_14525:HG3_Ill_MetaSV_5344:HG2_PB_HySA_17449:HG2_Ill_tnscope_1111:HG2_Ill_MetaSV_5170:HG4_PB_SVrefine2PBcRDovetail_4842:HG4_PB_SVrefine2Falcon1Dovetail_5940:HG4_Ill_svaba_12318:HG4_Ill_scalpel_9048:HG4_Ill_manta_2380:HG4_Ill_SVrefine2DISCOVARDovetail_7015:HG4_Ill_MetaSV_5396:HG4_Ill_GATKHCSBGrefine_6728:HG4_10X_allpass_1886:HG3_PB_SVrefine2PBcRDovetail_4423:HG3_PB_SVrefine2Falcon1Dovetail_5910:HG3_Ill_svaba_12340:HG3_Ill_scalpel_9409:HG3_Ill_SVrefine2DISCOVARDovetail_7241:HG3_Ill_GATKHCSBGrefine_6512:HG3_10X_allpass_1952:HG2_PB_SVrefine2PBcRplusDovetail_11177:HG2_PB_SVrefine2Falcon2Bionano_4530:HG2_PB_SVrefine2Falcon1plusDovetail_11969:HG2_Ill_svaba_12207:HG2_Ill_scalpel_9287:HG2_Ill_manta_2782:HG2_Ill_SVrefine2DISCOVARplusDovetail_13135:HG2_Ill_GATKHCSBGrefine_6615:HG2_10X_allpass_1628:HG2_10X_SVrefine210Xhap12_6914:HG2_PB_pbsv_9689;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6914:HG2_10X_allpass_1628:HG2_Ill_GATKHCSBGrefine_6615:HG2_Ill_SVrefine2DISCOVARplusDovetail_13135:HG2_Ill_manta_2782:HG2_Ill_scalpel_9287:HG2_Ill_svaba_12207:HG2_PB_SVrefine2Falcon1plusDovetail_11969:HG2_PB_SVrefine2Falcon2Bionano_4530:HG2_PB_SVrefine2PBcRplusDovetail_11177:HG3_10X_allpass_1952:HG3_Ill_GATKHCSBGrefine_6512:HG3_Ill_SVrefine2DISCOVARDovetail_7241:HG3_Ill_scalpel_9409:HG3_Ill_svaba_12340:HG3_PB_SVrefine2Falcon1Dovetail_5910:HG3_PB_SVrefine2PBcRDovetail_4423:HG4_10X_allpass_1886:HG4_Ill_GATKHCSBGrefine_6728:HG4_Ill_MetaSV_5396:HG4_Ill_SVrefine2DISCOVARDovetail_7015:HG4_Ill_manta_2380:HG4_Ill_scalpel_9048:HG4_Ill_svaba_12318:HG4_PB_SVrefine2Falcon1Dovetail_5940:HG4_PB_SVrefine2PBcRDovetail_4842;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0798771;ClusterMaxSizeDiff=0.0798771;ClusterMaxEditDist=0.0798771;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=-402;DistForward=41158;DistMin=-402;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=8:113085424-113085766;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4046.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:1/1:0:17:2:33:./.:0:0:0:0:1/1:0:41:./.:2:7:.:.:0.949799
chr8	113225848	HG3_10X_allpass_1954	TACACTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_10268:HG4_PB_assemblyticsfalcon_26331:HG3_PB_assemblyticsfalcon_26807:HG2_PB_assemblyticsfalcon_26895:HG2_PB_assemblyticsPBcR_26148:HG4_Ill_Krunchall_13745:HG3_Ill_Krunchall_13166:HG2_Ill_Krunchall_13477:HG3_PB_pbsv_9441:HG4_PB_pbsv_9711:HG2_PB_pbsv_9690:HG2_PB_HySA_17453:HG4_Ill_MetaSV_5397:HG3_Ill_MetaSV_5345:HG2_Ill_tnscope_1112:HG4_PB_SVrefine2PBcRDovetail_4843:HG4_PB_SVrefine2Falcon1Dovetail_5941:HG4_Ill_scalpel_9051:HG4_Ill_SVrefine2DISCOVARDovetail_7017:HG4_Ill_GATKHCSBGrefine_6729:HG4_10X_allpass_1887:HG3_PB_SVrefine2Falcon1Dovetail_5911:HG3_Ill_GATKHCSBGrefine_6514:HG3_10X_allpass_1954:HG2_PB_SVrefine2PBcRplusDovetail_11178:HG2_PB_SVrefine2Falcon2Bionano_4531:HG2_PB_SVrefine2Falcon1plusDovetail_11970:HG2_Ill_scalpel_9290:HG2_Ill_SpiralSDKrefine_17233:HG2_Ill_SVrefine2DISCOVARplusDovetail_13136:HG2_Ill_GATKHCSBGrefine_6616:HG2_10X_allpass_1629:HG2_10X_SVrefine210Xhap12_6916;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6916:HG2_10X_allpass_1629:HG2_Ill_GATKHCSBGrefine_6616:HG2_Ill_SVrefine2DISCOVARplusDovetail_13136:HG2_Ill_SpiralSDKrefine_17233:HG2_Ill_scalpel_9290:HG2_PB_SVrefine2Falcon1plusDovetail_11970:HG2_PB_SVrefine2Falcon2Bionano_4531:HG2_PB_SVrefine2PBcRplusDovetail_11178:HG3_10X_allpass_1954:HG3_Ill_GATKHCSBGrefine_6514:HG3_PB_SVrefine2Falcon1Dovetail_5911:HG4_10X_allpass_1887:HG4_Ill_GATKHCSBGrefine_6729:HG4_Ill_SVrefine2DISCOVARDovetail_7017:HG4_Ill_scalpel_9051:HG4_PB_SVrefine2Falcon1Dovetail_5941:HG4_PB_SVrefine2PBcRDovetail_4843;NumExactMatchSVs=18;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.08;PBcalls=14;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-343;DistBack=-479;DistForward=-289;DistMin=-479;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:113225849-113226205;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4047.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:79:1/1:1:29:1:46:./.:0:0:0:0:1/1:0:46:./.:2:12:.:.:.
chr8	114056492	HG3_Ill_SVrefine2DISCOVARDovetail_7243	TATGAAATAGCAAATTTTGTTTTCCTTCACTTTTTCAATTTCAATTTTTAATAGGAATTTACTTCCTCTAAAGGAATGTTACTGTCTTCAGTGTCTAGAACAGTCCATAATAGGTAGTAGTCATTCAATAAATTCTGTTGAATGAATAGATAAAGATTGTTAAACATTTTTTTCTGATTTTGACCCTAACACTATGCCCAGCCTAGACTGATTCACAGCCCAACTCTTGAGAGACACAGAGCAGATATAATCATACAATATTCTATAAAGTATCTTTTCACTACAAATAAGTAAAATGCCAAAAATTTAGTCATTTCCTTAAAATTTAGTGGATTCTTATATGCCTTATTGAATAACAAAGAAAATGCTGTAATTAGTACTAGTTTTTTGGAACTGGAATATAACTGTGAATATATCAACATAAATGTGGCCCACATGTTACCAAAGTTTAAAAACCACTAATTTACACCATCTCATCCTTTTTTAACCTATTTCATTTTCTCCAGTTTCTCCCCAAATATCCTTTGCATTTTATTGTTCTGTAATTTTGTTTATGCTGTTATTTCTTTTGTCTGAAAAGATAAAGTATAGAAAATCTTGTCTGGAGAGTGTGAAACTAGTTAGGATGCTGTTGTAATAATTTTGATTATATATTTTGAGGACTTGCCCAACTGACTTGACAAACTACTACTTATCCTTAAATATTCAGCTCAAATGTCACTTTTTCACTTTTCTGTGAAATGTGTGTTTCATCTTGATCCCACAACACTTTATATTGCCTCTATTTTATGTGCAACGATCTAAAAATCCCATAAATATTTGTCTACATGTATTACTATTATTCCTTAAGGGTAGAGAAAAAAAGTCCAGTATCCATACACTCTTTAAATCTTGGTTAAATGAAGGGGCTAAACAAAACAAAACAAACAACAACAAAAAAACTGCTTATGATACCAAGAACAATCGCCTTGCAATGCTTTTTTGAATGCCCTACTAGTTTTCTAAAGGCATACCTGCATATATTGGTTACTCAATCATTCCTGACACCACCCTTTCCATAATTGTACCATTTTAAAGAATTTTATTCGTTTCAACCAAAACGTCTCACGTTATTGTCTTTTTGTCCTAACACAAACTTTGGGGTTATTTGGAATACATCTAACTCTTCTTCTAAATATATGCCTTTAAATATGTAAAAGCAGCTGGTCTATATGCCACTAAATTCTAATTTTACTCTAGTCTATGGTTTCTAAATTAAAATCATTGATCCCGTTCCTCTAATTCAAACAAAAAAAATAAAGCCAAAGCAAGTAATAAACAAAGCAATTATAAATCTACCAATCTTAAAAATTCATATGCTATACCATGAAGACTTCTTCTAGCACCTGAACTGAACACTGGGAACTGGAGTGTGGTTCAGACAGCACACACCTCTGCTAATATGAAAAATTGTAACTATTTCCATGTTTCTTCTCAGGCTAAAATTCAACTTACACTTGTGCCTCACCAGCACGAAACTCGGCACATCATTTTACTTTCAGTTGTTGTTGTTGTTTTTAATATTAGACGGAAGAGTACAAATTCTAAATACTAAGTTTTTTTCCTGTAAGCCCTAGCAATAATTCTTTTCATAAGACAAGTTGTATATATTTTTTTCACAGAATTTTCTTTTAGACCAAAATATCTGGGAAATTTGTAAACGACCCTTTTTACTTTTGCCTGCCTTTAAATGACTGAATCGATTTACTTTTAAATGTTTTACAAACAAACAAACCTTTTATTGAAGTAATTCCAGAAAAAGAAACTCTGGATCCTCAGCTCATGTGGTCTATCGGGAAGTACCCTCAGCCTGGCAAGCGCTTCCACTATTCTCATTGCCCAGTCAGCGGCCTCCTTCAGACCTCTGCTGGGATACGACTGTCTCAGTCAGGCTGACGCCAACCACACGAGGTGCGACCCCAGGTGTGTGAGGGAAAGGCCCCTACCCCACAGGGAACAACAGCCACGGGGAAAGGAAAAGCCCTAAAACCCTCTTGCGGAGTTTTAAAAAAGAAAGAAACAAACAACAACAACAAAACAAAACAAAAAAAGCCTTATTTGAACAAACAACAATAACAAAACAAAATAAAAAAACGCCTTATTTGTGCCCTGAGTCTTTCTCCACAAGAGCAGCCACCCAGGTGTCTCCCTCTGAGAGTTCTGAAGTCCGCGGGCCTGAGAGGAACGCAAAACTCCCTCATTCCGAGTCAGTCACAAGAGGCCCCGCCCCCAGCGCTGCTGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6918:HG2_10X_allpass_1630:HG3_PB_pbsv_9442:HG2_PB_pbsv_9691:HG3_PB_assemblyticsfalcon_26808:HG2_PB_assemblyticsfalcon_26898:HG3_10X_allpass_1955:HG3_Ill_Krunchall_13170:HG2_Ill_Krunchall_13481:HG2_Ill_tnscope_1113:HG3_PB_SVrefine2PBcRDovetail_4425:HG3_PB_SVrefine2Falcon1Dovetail_5912:HG3_Ill_SVrefine2DISCOVARDovetail_7243:HG3_Ill_MetaSV_5346:HG3_Ill_GATKHCSBGrefine_6515:HG2_PB_SVrefine2PBcRplusDovetail_11180:HG2_PB_SVrefine2Falcon2Bionano_4532:HG2_PB_SVrefine2Falcon1plusDovetail_11971:HG2_Ill_breakscan11_1409:HG2_Ill_SpiralSDKrefine_17238:HG2_Ill_MetaSV_5173;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6918:HG3_PB_SVrefine2PBcRDovetail_4425:HG3_PB_SVrefine2Falcon1Dovetail_5912:HG3_Ill_SVrefine2DISCOVARDovetail_7243:HG3_Ill_MetaSV_5346:HG3_Ill_GATKHCSBGrefine_6515:HG2_PB_SVrefine2PBcRplusDovetail_11180:HG2_PB_SVrefine2Falcon2Bionano_4532:HG2_PB_SVrefine2Falcon1plusDovetail_11971:HG2_Ill_breakscan11_1409:HG2_Ill_SpiralSDKrefine_17238:HG2_Ill_MetaSV_5173;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0039517;ClusterMaxSizeDiff=0.0039517;ClusterMaxEditDist=0.0039517;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-2280;DistBack=-2281;DistForward=17493;DistMin=-2281;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=8:114056493-114058775;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4048.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:54:1|0:0:35:26:0:./.:0:0:0:0:0/1:62:10:0/1:171:79:1783:.:.
chr8	114934392	HG3_10X_allpass_1957	TTTAAGTTTTACACTTGACTTGAATTTCCACCCAGGACCTTTTTTCTGGACCGTGGTACAGGAAGGTCGAGCTAAGACAGAGTACAGAACACTTTTTTGAGATGGGTCTGGGGGAGATCAGAATTTGAAGATAACAAAACACCTGGAATGTGAAGGATTGGTATAGGGTAGAAAGAAGTTGTACAGAGTAGTTAGTGGGTTAGCTGTTGATCCTTGACTGCATGTAAAGGGTGATATTCCACATCTCCTAAAAAGTCCTGCGATCCTTAGAACTGATCAGACATAGCTGAC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_9717:HG4_Ill_Krunchall_13756:HG3_Ill_Krunchall_13171:HG2_Ill_Krunchall_13487:HG4_PB_assemblyticsfalcon_26337:HG3_PB_assemblyticsfalcon_26811:HG3_PB_pbsv_9444:HG2_PB_pbsv_9694:HG4_PB_SVrefine2Falcon1Dovetail_5943:HG4_Ill_manta_2383:HG4_Ill_SVrefine2DISCOVARDovetail_7024:HG4_Ill_GATKHCSBGrefine_6733:HG4_Ill_Cortex_3712:HG4_10X_allpass_1889:HG3_PB_SVrefine2PBcRDovetail_4427:HG3_PB_SVrefine2Falcon1Dovetail_5915:HG3_Ill_scalpel_9413:HG3_Ill_manta_2278:HG3_Ill_SVrefine2DISCOVARDovetail_7246:HG3_Ill_MetaSV_5349:HG3_Ill_GATKHCSBGrefine_6517:HG3_Ill_Cortex_3742:HG3_10X_allpass_1957:HG2_PB_SVrefine2Falcon2Bionano_4533:HG2_Ill_manta_2784:HG2_Ill_SpiralSDKrefine_17243:HG2_Ill_SVrefine2DISCOVARplusDovetail_13138:HG2_Ill_GATKHCSBGrefine_6619:HG2_Ill_Cortex_9037:HG2_10X_SVrefine210Xhap12_6920:HG4_Ill_Spiral_803:HG4_Ill_MetaSV_5400:HG2_PB_HySA_17461:HG2_Ill_tnscope_1114:HG2_Ill_Spiral_690:HG2_Ill_MetaSV_5175;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6920:HG2_Ill_Cortex_9037:HG2_Ill_GATKHCSBGrefine_6619:HG2_Ill_SVrefine2DISCOVARplusDovetail_13138:HG2_Ill_SpiralSDKrefine_17243:HG2_Ill_manta_2784:HG2_PB_SVrefine2Falcon2Bionano_4533:HG3_10X_allpass_1957:HG3_Ill_Cortex_3742:HG3_Ill_GATKHCSBGrefine_6517:HG3_Ill_MetaSV_5349:HG3_Ill_SVrefine2DISCOVARDovetail_7246:HG3_Ill_manta_2278:HG3_Ill_scalpel_9413:HG3_PB_SVrefine2Falcon1Dovetail_5915:HG3_PB_SVrefine2PBcRDovetail_4427:HG4_10X_allpass_1889:HG4_Ill_Cortex_3712:HG4_Ill_GATKHCSBGrefine_6733:HG4_Ill_SVrefine2DISCOVARDovetail_7024:HG4_Ill_manta_2383:HG4_PB_SVrefine2Falcon1Dovetail_5943;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00687285;ClusterMaxSizeDiff=0.00687285;ClusterMaxEditDist=0.0103448;PBcalls=10;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-290;DistBack=17050;DistForward=-289;DistMin=-289;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:114934393-114934683;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4050.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:40:0|1:23:1:2:41:./.:0:0:0:0:0/1:52:17:./.:.:.:.:.:.
chr8	115997806	HG3_PB_SVrefine2Falcon1Dovetail_5917	TGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGTCTACGTCCTGAAAGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAATGAGGCATCATGCTACCTGACTTCAAACTATACTACAAGCCTACAGTAACCAAAACAGCATGGTACTAGTACCGAAACAGAGATATAGACCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGTCACAAACAAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACTTCATACAAAAATTAATTCAAGATGGATTAGAGACATAAAGTATTTAATGTTTGTTTTTTGTTAGTTCTTTCCTAGAAATAGAAGACTGGCTATGTCGTCTATGATGTTACCTGGCTTATAAGTATGTTAACCTAAACATATTATTTTTAGATTATAAGATAGCTTCTGGACATTA	AATT	20	PASS	ClusterIDs=HG2_PB_pbsv_9698:HG3_Ill_GATKHCSBGrefine_6519:HG2_Ill_GATKHCSBGrefine_6624:HG2_Ill_tnscope_1115:HG3_10X_allpass_1958:HG3_PB_assemblyticsfalcon_26815:HG3_PB_SVrefine2PBcRDovetail_4429:HG3_PB_SVrefine2Falcon1Dovetail_5917:HG3_Ill_SVrefine2DISCOVARDovetail_7248:HG2_PB_assemblyticsfalcon_26910:HG2_PB_SVrefine2PBcRplusDovetail_11186:HG2_PB_SVrefine2Falcon1plusDovetail_11976:HG2_Ill_SVrefine2DISCOVARplusDovetail_13141:HG2_10X_SVrefine210Xhap12_6922:HG3_PB_pbsv_9446:HG3_Ill_Spiral_10277:HG2_Ill_Spiral_691:HG3_PB_HySA_14538:HG3_Ill_Krunchall_13176:HG2_Ill_Krunchall_13495:HG2_10X_allpass_1632:HG2_PB_assemblyticsPBcR_26163:HG3_Ill_MetaSV_5352:HG2_Ill_MetaSV_5178;NumClusterSVs=24;ExactMatchIDs=HG2_PB_assemblyticsPBcR_26163:HG2_10X_SVrefine210Xhap12_6922:HG2_Ill_SVrefine2DISCOVARplusDovetail_13141:HG2_PB_SVrefine2Falcon1plusDovetail_11976:HG2_PB_SVrefine2PBcRplusDovetail_11186:HG2_PB_assemblyticsfalcon_26910:HG3_Ill_SVrefine2DISCOVARDovetail_7248:HG3_PB_SVrefine2Falcon1Dovetail_5917:HG3_PB_SVrefine2PBcRDovetail_4429:HG3_PB_assemblyticsfalcon_26815;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0161146;ClusterMaxSizeDiff=0.0161146;ClusterMaxEditDist=0.0161146;PBcalls=10;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-557;DistBack=0;DistForward=3762;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:115997806-115998366;PctSeqSimilarity=0.9818;PctSizeSimilarity=0.9964;PctRecOverlap=0.9893;SizeDiff=2;StartDistance=1;EndDistance=6;GTMatch=0;TruScore=98;MatchId=4051.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:38:0|1:33:0:0:48:./.:0:0:0:0:0/1:53:15:0/1:39:13:.:.:.
chr8	116009247	HG2_Ill_svaba_12222	CCTTATCAGTAGTTCTGCTTTTGCCCTTTGCCTTGTGATCTTTGTTGGACT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6923:HG3_PB_assemblyticsfalcon_26817:HG3_PB_HySA_14539:HG2_PB_HySA_17471:HG3_PB_pbsv_9447:HG3_Ill_svaba_12348:HG3_Ill_scalpel_9417:HG3_Ill_Krunchall_13177:HG3_Ill_GATKHC_15709:HG3_Ill_GATKHCSBGrefine_6520:HG3_Ill_FB_8500:HG3_Ill_250bpfermikitraw_12806:HG3_Ill_150bpfermikitraw_12421:HG2_Ill_svaba_12222:HG2_Ill_SpiralSDKrefine_17251:HG2_Ill_Krunchall_13496:HG2_Ill_GATKHC_15755:HG2_Ill_GATKHCSBGrefine_6625:HG2_Ill_250bpfermikitraw_13184:HG2_Ill_150bpfermikitraw_12374:HG3_Ill_Spiral_10278:HG2_PB_HySA_17470:HG4_PB_SVrefine2Falcon1Dovetail_5945:HG3_PB_SVrefine2PBcRDovetail_4430:HG3_Ill_SVrefine2DISCOVARDovetail_7249:HG2_PB_SVrefine2PBcRplusDovetail_11187:HG2_PB_SVrefine2PB10Xhap12_7051:HG2_PB_SVrefine2Falcon1plusDovetail_11977:HG2_Ill_SVrefine2DISCOVARplusDovetail_13142;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12374:HG2_Ill_250bpfermikitraw_13184:HG2_Ill_GATKHCSBGrefine_6625:HG2_Ill_GATKHC_15755:HG2_Ill_Krunchall_13496:HG2_Ill_SpiralSDKrefine_17251:HG2_Ill_svaba_12222:HG3_Ill_150bpfermikitraw_12421:HG3_Ill_250bpfermikitraw_12806:HG3_Ill_FB_8500:HG3_Ill_GATKHCSBGrefine_6520:HG3_Ill_GATKHC_15709:HG3_Ill_Krunchall_13177:HG3_Ill_scalpel_9417:HG3_Ill_svaba_12348:HG3_PB_pbsv_9447;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0392157;PBcalls=10;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=14;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=7097;DistForward=-40;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=39;REFWIDENED=8:116009244-116009332;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4052.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:33:0|1:18:3:3:38:./.:0:0:0:0:0/1:20:15:./.:.:.:.:.:.
chr8	116104452	HG2_Ill_250bpfermikitraw_13186	GTATTTTATAGAGAGTTTTTAAACTCTATATTTTATAGAGAGTTTTTAAACTCTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6924:HG2_PB_pbsv_9699:HG3_PB_pbsv_9448:HG4_PB_HySA_14108:HG3_PB_HySA_14542:HG2_PB_HySA_17473:HG4_Ill_svaba_12332:HG4_Ill_Krunchall_13763:HG4_Ill_GATKHC_15799:HG4_Ill_GATKHCSBGrefine_6742:HG4_Ill_250bpfermikitraw_13101:HG4_Ill_150bpfermikitraw_12552:HG3_Ill_svaba_12349:HG3_Ill_manta_2280:HG3_Ill_Krunchall_13179:HG3_Ill_GATKHC_15712:HG3_Ill_GATKHCSBGrefine_6521:HG3_Ill_250bpfermikitraw_12808:HG3_Ill_150bpfermikitraw_12423:HG2_Ill_svaba_12224:HG2_Ill_manta_2787:HG2_Ill_SpiralSDKrefine_17252:HG2_Ill_GATKHC_15757:HG2_Ill_GATKHCSBGrefine_6626:HG2_Ill_250bpfermikitraw_13186:HG2_Ill_150bpfermikitraw_12376:HG4_PB_pbsv_9720:HG4_PB_SVrefine2PBcRDovetail_4848:HG4_PB_SVrefine2Falcon1Dovetail_5946:HG4_Ill_SVrefine2DISCOVARDovetail_7029:HG3_PB_SVrefine2PBcRDovetail_4431:HG3_PB_SVrefine2Falcon1Dovetail_5918:HG3_Ill_SVrefine2DISCOVARDovetail_7250:HG2_PB_SVrefine2PBcRplusDovetail_11188:HG2_PB_SVrefine2PB10Xhap12_7052:HG2_PB_SVrefine2Falcon2Bionano_4534:HG2_PB_SVrefine2Falcon1plusDovetail_11978:HG2_Ill_SVrefine2DISCOVARplusDovetail_13145;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12376:HG2_Ill_250bpfermikitraw_13186:HG2_Ill_GATKHCSBGrefine_6626:HG2_Ill_GATKHC_15757:HG2_Ill_SpiralSDKrefine_17252:HG2_Ill_manta_2787:HG2_Ill_svaba_12224:HG3_Ill_150bpfermikitraw_12423:HG3_Ill_250bpfermikitraw_12808:HG3_Ill_GATKHCSBGrefine_6521:HG3_Ill_GATKHC_15712:HG3_Ill_Krunchall_13179:HG3_Ill_manta_2280:HG3_Ill_svaba_12349:HG4_Ill_150bpfermikitraw_12552:HG4_Ill_250bpfermikitraw_13101:HG4_Ill_GATKHCSBGrefine_6742:HG4_Ill_GATKHC_15799:HG4_Ill_Krunchall_13763:HG4_Ill_svaba_12332;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0555556;PBcalls=14;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-54;DistBack=16124;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=97;REFWIDENED=8:116104441-116104591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4053.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:1:14:1:7:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr8	116488216	HG2_Ill_scalpel_9301	TCAGAAAATATACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1410:HG4_PB_HySA_14111:HG4_PB_assemblyticsfalcon_26349:HG3_PB_assemblyticsfalcon_26822:HG2_PB_assemblyticsfalcon_26917:HG4_Ill_Krunchall_13766:HG3_Ill_Krunchall_13183:HG2_Ill_Krunchall_13500:HG2_PB_pbsv_9702:HG4_PB_pbsv_9724:HG4_Ill_MetaSV_5405:HG2_Ill_tnscope_1116:HG4_PB_SVrefine2PBcRDovetail_4850:HG4_PB_SVrefine2Falcon1Dovetail_5948:HG4_Ill_svaba_12335:HG4_Ill_scalpel_9064:HG4_Ill_manta_2387:HG4_Ill_SVrefine2DISCOVARDovetail_7030:HG4_Ill_GATKHCSBGrefine_6745:HG4_10X_allpass_1891:HG3_PB_pbsv_9451:HG3_PB_SVrefine2PBcRDovetail_4433:HG3_PB_SVrefine2Falcon1Dovetail_5920:HG3_Ill_svaba_12351:HG3_Ill_scalpel_9420:HG3_Ill_MetaSV_5354:HG3_Ill_GATKHCSBGrefine_6523:HG3_10X_allpass_1959:HG2_PB_SVrefine2PB10Xhap12_7055:HG2_PB_SVrefine2Falcon1plusDovetail_11980:HG2_Ill_svaba_12225:HG2_Ill_scalpel_9301:HG2_Ill_manta_2790:HG2_Ill_MetaSV_5180:HG2_Ill_GATKHCSBGrefine_6629:HG2_10X_allpass_1633:HG2_10X_SVrefine210Xhap12_6925:HG3_Ill_Spiral_10279;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6925:HG2_10X_allpass_1633:HG2_Ill_GATKHCSBGrefine_6629:HG2_Ill_MetaSV_5180:HG2_Ill_manta_2790:HG2_Ill_scalpel_9301:HG2_Ill_svaba_12225:HG2_PB_SVrefine2Falcon1plusDovetail_11980:HG2_PB_SVrefine2PB10Xhap12_7055:HG3_10X_allpass_1959:HG3_Ill_GATKHCSBGrefine_6523:HG3_Ill_MetaSV_5354:HG3_Ill_scalpel_9420:HG3_Ill_svaba_12351:HG3_PB_SVrefine2Falcon1Dovetail_5920:HG3_PB_SVrefine2PBcRDovetail_4433:HG3_PB_pbsv_9451:HG4_10X_allpass_1891:HG4_Ill_GATKHCSBGrefine_6745:HG4_Ill_SVrefine2DISCOVARDovetail_7030:HG4_Ill_manta_2387:HG4_Ill_scalpel_9064:HG4_Ill_svaba_12335:HG4_PB_SVrefine2Falcon1Dovetail_5948:HG4_PB_SVrefine2PBcRDovetail_4850;NumExactMatchSVs=25;ClusterMaxShiftDist=0.156986;ClusterMaxSizeDiff=0.156986;ClusterMaxEditDist=0.156986;PBcalls=13;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-359;DistForward=-317;DistMin=-359;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=25;REFWIDENED=8:116488217-116488570;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4054.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:18:./.:11:16:17:3:./.:0:0:0:0:0/1:28:18:0/1:24:5:.:.:.
chr8	117399811	HG2_PB_SVrefine2Falcon2Bionano_4536	TTTTTTAAAGAATGTTGAATATTGGCCCCTACTCTCTTCTGTCTTGTAGAGTTTCTGCTGAGAGATCTGCTGTTAGTCTGATGGGCTTCCCTTTGTGGGTAACCCGACATTTCTCTCTGGCTACCGTTAACATTTTTTCCTTCATTTCAACTTTGGTCAATCTGACTATTACGTGTCTTGGGGTTG	AGCACTT	20	PASS	ClusterIDs=HG4_PB_pbsv_9728:HG2_PB_PB10Xdip_29319:HG2_PB_SVrefine2PB10Xhap12_7056:HG2_PB_HySA_17480:HG4_Ill_svaba_12342:HG2_Ill_svaba_12233:HG4_Ill_manta_2388:HG4_Ill_SVrefine2DISCOVARDovetail_7031:HG2_PB_assemblyticsPBcR_26174:HG2_PB_SVrefine2PBcRplusDovetail_11191:HG2_PB_SVrefine2Falcon2Bionano_4536:HG2_Ill_SVrefine2DISCOVARplusDovetail_13148:HG2_10X_SVrefine210Xhap12_6928:HG2_PB_pbsv_9706:HG4_Ill_MetaSV_5407:HG4_Ill_Krunchall_13771:HG2_Ill_Krunchall_13503;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6928:HG2_Ill_SVrefine2DISCOVARplusDovetail_13148:HG2_PB_SVrefine2Falcon2Bionano_4536:HG2_PB_SVrefine2PBcRplusDovetail_11191:HG2_PB_assemblyticsPBcR_26174:HG4_Ill_SVrefine2DISCOVARDovetail_7031:HG4_Ill_manta_2388;NumExactMatchSVs=7;ClusterMaxShiftDist=0.272464;ClusterMaxSizeDiff=0.272464;ClusterMaxEditDist=0.272464;PBcalls=8;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-179;DistBack=21425;DistForward=-177;DistMin=-177;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:117399811-117399996;PctSeqSimilarity=0.9973;PctSizeSimilarity=0.9728;PctRecOverlap=0.9946;SizeDiff=-5;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=4055.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:33:0|1:21:4:7:23:./.:0:0:0:0:0/1:47:21:./.:.:.:.:.:.
chr8	117448719	HG3_Ill_svaba_12358	AGAACTATACAACATGAAACATAAGGAGAAAAGATACTGGAGGTGGAAAGACATAAACAGAGATTAAGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6929:HG2_Ill_Spiral_692:HG3_PB_pbsv_9454:HG2_PB_pbsv_9707:HG3_PB_HySA_14549:HG2_PB_HySA_17481:HG3_Ill_svaba_12358:HG3_Ill_manta_2282:HG3_Ill_SVrefine2DISCOVARDovetail_7256:HG3_Ill_Krunchall_13188:HG3_Ill_GATKHCSBGrefine_6526:HG3_Ill_250bpfermikitraw_12817:HG2_PB_SVrefine2Falcon1plusDovetail_11983:HG2_Ill_svaba_12234:HG2_Ill_manta_2791:HG2_Ill_SpiralSDKrefine_17258:HG2_Ill_GATKHCSBGrefine_6634:HG2_Ill_250bpfermikitraw_13194;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6929:HG3_Ill_svaba_12358:HG3_Ill_manta_2282:HG3_Ill_SVrefine2DISCOVARDovetail_7256:HG3_Ill_Krunchall_13188:HG3_Ill_GATKHCSBGrefine_6526:HG3_Ill_250bpfermikitraw_12817:HG2_PB_SVrefine2Falcon1plusDovetail_11983:HG2_Ill_svaba_12234:HG2_Ill_manta_2791:HG2_Ill_SpiralSDKrefine_17258:HG2_Ill_GATKHCSBGrefine_6634:HG2_Ill_250bpfermikitraw_13194;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0979021;ClusterMaxSizeDiff=0.0979021;ClusterMaxEditDist=0.0979021;PBcalls=5;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-68;DistBack=38559;DistForward=15831;DistMin=15831;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=81;REFWIDENED=8:117448720-117448868;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4056.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:13:0|1:37:1:4:13:./.:0:0:0:0:0/1:15:21:./.:.:.:.:.:.
chr8	117690957	HG2_PB_SVrefine2Falcon1plusDovetail_11984	GGCCGCCCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGACCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGTCCCTCTGCCCGGCCAGCCTCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGTGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGAAGGTGGGGGGGTCAGCCCCCCGCCCGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11984:HG4_PB_SVrefine2Falcon1Dovetail_5950:HG3_PB_SVrefine2Falcon1Dovetail_5922:HG2_PB_assemblyticsfalcon_26928:HG2_PB_SVrefine2Falcon1plusDovetail_11985:HG2_PB_pbsv_9708:HG3_PB_pbsv_9457:HG2_PB_SVrefine2PBcRplusDovetail_11193:HG2_PB_SVrefine2PB10Xhap12_7058;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11984:HG2_PB_SVrefine2PBcRplusDovetail_11193:HG2_PB_SVrefine2PB10Xhap12_7058;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0358374;ClusterMaxSizeDiff=0.0234321;ClusterMaxEditDist=0.195727;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-716;DistBack=46033;DistForward=-568;DistMin=-568;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=473;REFWIDENED=8:117690958-117692146;PctSeqSimilarity=0.8721;PctSizeSimilarity=0.9931;PctRecOverlap=0.7922;SizeDiff=-5;StartDistance=-145;EndDistance=-150;GTMatch=0;TruScore=88;MatchId=4057.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:28:./.:16:24:18:4:./.:0:0:0:0:0/0:22:0:0/1:45:7:.:.:.
chr8	118223529	HG3_10X_allpass_1961	CCCAAAAGCTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAA	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_1117:HG4_Ill_Krunchall_13776:HG3_Ill_Krunchall_13193:HG2_Ill_Krunchall_13507:HG4_PB_assemblyticsfalcon_26359:HG3_PB_assemblyticsfalcon_26833:HG2_PB_assemblyticsfalcon_26931:HG2_PB_assemblyticsPBcR_26180:HG4_PB_HySA_14122:HG2_PB_HySA_17486:HG3_PB_pbsv_9460:HG2_PB_SVrefine2PB10Xhap12_7063:HG2_PB_PB10Xdip_29328:HG4_PB_pbsv_9731:HG4_PB_SVrefine2Falcon1Dovetail_5953:HG4_Ill_scalpel_9071:HG4_Ill_SVrefine2DISCOVARDovetail_7034:HG4_Ill_MetaSV_5409:HG4_Ill_GATKHCSBGrefine_6752:HG4_10X_allpass_1892:HG3_PB_SVrefine2PBcRDovetail_4437:HG3_PB_SVrefine2Falcon1Dovetail_5925:HG3_Ill_SVrefine2DISCOVARDovetail_7257:HG3_Ill_GATKHCSBGrefine_6528:HG3_10X_allpass_1961:HG2_PB_pbsv_9711:HG2_PB_SVrefine2PBcRplusDovetail_11196:HG2_PB_SVrefine2PB10Xhap12_7062:HG2_PB_SVrefine2Falcon1plusDovetail_11988:HG2_Ill_scalpel_9308:HG2_Ill_SpiralSDKrefine_17261:HG2_Ill_SVrefine2DISCOVARplusDovetail_13152:HG2_Ill_MetaSV_5183:HG2_Ill_GATKHCSBGrefine_6637:HG2_10X_allpass_1634:HG2_10X_SVrefine210Xhap12_6932:HG3_Ill_MetaSV_5356;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6932:HG2_10X_allpass_1634:HG2_Ill_GATKHCSBGrefine_6637:HG2_Ill_MetaSV_5183:HG2_Ill_SVrefine2DISCOVARplusDovetail_13152:HG2_Ill_SpiralSDKrefine_17261:HG2_Ill_scalpel_9308:HG2_PB_SVrefine2Falcon1plusDovetail_11988:HG2_PB_SVrefine2PB10Xhap12_7062:HG2_PB_SVrefine2PBcRplusDovetail_11196:HG2_PB_pbsv_9711:HG3_10X_allpass_1961:HG3_Ill_GATKHCSBGrefine_6528:HG3_Ill_SVrefine2DISCOVARDovetail_7257:HG3_PB_SVrefine2Falcon1Dovetail_5925:HG3_PB_SVrefine2PBcRDovetail_4437:HG4_10X_allpass_1892:HG4_Ill_GATKHCSBGrefine_6752:HG4_Ill_MetaSV_5409:HG4_Ill_SVrefine2DISCOVARDovetail_7034:HG4_Ill_scalpel_9071:HG4_PB_SVrefine2Falcon1Dovetail_5953:HG4_PB_pbsv_9731;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0907441;ClusterMaxSizeDiff=0.0907441;ClusterMaxEditDist=0.0907441;PBcalls=17;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-280;DistBack=113496;DistForward=47293;DistMin=47293;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=8:118223530-118223822;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4058.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:0|1:32:0:0:33:./.:0:0:0:0:0/1:31:21:./.:.:.:.:.:.
chr8	118679600	HG3_Ill_GATKHCSBGrefine_6529	ATATTTTATTTTATTTTATTTTATTTTATTTTATTTTTTTTATTTATTTTATTTTATTTTATTTTATTTTATTTTATTT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_693:HG2_PB_HySA_17492:HG4_Ill_Krunchall_13781:HG4_PB_pbsv_9737:HG3_PB_assemblyticsfalcon_26839:HG2_PB_pbsv_9714:HG4_PB_assemblyticsfalcon_26364:HG4_PB_HySA_14133:HG4_Ill_GATKHC_15818:HG4_Ill_GATKHCSBGrefine_6756:HG4_Ill_250bpfermikitraw_13116:HG4_10X_allpass_1893:HG4_Ill_manta_2389:HG4_Ill_Krunchall_13780:HG4_Ill_150bpfermikitraw_12568:HG3_PB_pbsv_9462:HG3_Ill_manta_2283:HG3_Ill_Krunchall_13196:HG3_Ill_GATKHC_15730:HG3_Ill_GATKHCSBGrefine_6529:HG3_Ill_250bpfermikitraw_12825:HG3_Ill_150bpfermikitraw_12436:HG3_10X_allpass_1962:HG2_PB_assemblyticsfalcon_26936:HG2_PB_assemblyticsPBcR_26185:HG2_Ill_manta_2792:HG2_Ill_SpiralSDKrefine_17264:HG2_Ill_Krunchall_13511:HG2_Ill_GATKHC_15775:HG2_Ill_GATKHCSBGrefine_6638:HG2_Ill_250bpfermikitraw_13201:HG2_Ill_150bpfermikitraw_12392:HG2_10X_allpass_1635:HG4_Ill_Spiral_804:HG3_Ill_Spiral_10289;NumClusterSVs=35;ExactMatchIDs=HG2_10X_allpass_1635:HG2_Ill_150bpfermikitraw_12392:HG2_Ill_250bpfermikitraw_13201:HG2_Ill_GATKHCSBGrefine_6638:HG2_Ill_GATKHC_15775:HG2_Ill_Krunchall_13511:HG2_Ill_SpiralSDKrefine_17264:HG2_Ill_manta_2792:HG2_PB_assemblyticsPBcR_26185:HG2_PB_assemblyticsfalcon_26936:HG3_10X_allpass_1962:HG3_Ill_150bpfermikitraw_12436:HG3_Ill_250bpfermikitraw_12825:HG3_Ill_GATKHCSBGrefine_6529:HG3_Ill_GATKHC_15730:HG3_Ill_Krunchall_13196:HG3_Ill_manta_2283:HG3_PB_pbsv_9462:HG4_Ill_150bpfermikitraw_12568:HG4_Ill_Krunchall_13780:HG4_Ill_manta_2389;NumExactMatchSVs=21;ClusterMaxShiftDist=0.281879;ClusterMaxSizeDiff=0.281879;ClusterMaxEditDist=0.281879;PBcalls=9;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-78;DistBack=49773;DistForward=20758;DistMin=20758;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=44;REFWIDENED=8:118679601-118679722;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4059.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:62:./.:6:8:0:10:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr8	118712788	HG4_PB_SVrefine2Falcon1Dovetail_5958	TCTATGGAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6935:HG2_Ill_Krunchall_13512:HG4_PB_assemblyticsfalcon_26365:HG3_PB_assemblyticsfalcon_26840:HG2_PB_assemblyticsfalcon_26937:HG2_PB_assemblyticsPBcR_26186:HG4_Ill_Krunchall_13782:HG3_Ill_Krunchall_13197:HG2_PB_pbsv_9715:HG3_PB_pbsv_9463:HG4_PB_HySA_14134:HG2_PB_HySA_17494:HG3_PB_HySA_14556:HG4_Ill_MetaSV_5412:HG2_Ill_tnscope_1118:HG4_PB_pbsv_9738:HG4_PB_SVrefine2PBcRDovetail_4858:HG4_PB_SVrefine2Falcon1Dovetail_5958:HG4_Ill_scalpel_9073:HG4_Ill_manta_2390:HG4_Ill_SVrefine2DISCOVARDovetail_7036:HG4_Ill_GATKHCSBGrefine_6757:HG4_10X_allpass_1894:HG3_PB_SVrefine2Falcon1Dovetail_5928:HG3_Ill_scalpel_9427:HG3_Ill_manta_2284:HG3_Ill_MetaSV_5357:HG3_Ill_GATKHCSBGrefine_6530:HG3_10X_allpass_1963:HG2_PB_SVrefine2PBcRplusDovetail_11200:HG2_PB_SVrefine2PB10Xhap12_7066:HG2_PB_SVrefine2Falcon2Bionano_4541:HG2_PB_SVrefine2Falcon1plusDovetail_11991:HG2_Ill_scalpel_9311:HG2_Ill_manta_2793:HG2_Ill_breakscan11_1411:HG2_Ill_SVrefine2DISCOVARplusDovetail_13157:HG2_Ill_MetaSV_5185:HG2_Ill_GATKHCSBGrefine_6639:HG2_10X_allpass_1636;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6935:HG4_PB_pbsv_9738:HG4_PB_SVrefine2PBcRDovetail_4858:HG4_PB_SVrefine2Falcon1Dovetail_5958:HG4_Ill_scalpel_9073:HG4_Ill_manta_2390:HG4_Ill_SVrefine2DISCOVARDovetail_7036:HG4_Ill_GATKHCSBGrefine_6757:HG4_10X_allpass_1894:HG3_PB_SVrefine2Falcon1Dovetail_5928:HG3_Ill_scalpel_9427:HG3_Ill_manta_2284:HG3_Ill_MetaSV_5357:HG3_Ill_GATKHCSBGrefine_6530:HG3_10X_allpass_1963:HG2_PB_SVrefine2PBcRplusDovetail_11200:HG2_PB_SVrefine2PB10Xhap12_7066:HG2_PB_SVrefine2Falcon2Bionano_4541:HG2_PB_SVrefine2Falcon1plusDovetail_11991:HG2_Ill_scalpel_9311:HG2_Ill_manta_2793:HG2_Ill_breakscan11_1411:HG2_Ill_SVrefine2DISCOVARplusDovetail_13157:HG2_Ill_MetaSV_5185:HG2_Ill_GATKHCSBGrefine_6639:HG2_10X_allpass_1636;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0892308;ClusterMaxSizeDiff=0.0892308;ClusterMaxEditDist=0.0892308;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-668;DistForward=-317;DistMin=-668;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:118712789-118713134;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4060.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:1/1:4:14:0:25:./.:0:0:0:0:1/1:0:40:1/1:2:26:.:.:.
chr8	119447044	HG3_10X_allpass_1965	TAAAGTGTGCTTCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1413:HG4_Ill_Krunchall_13795:HG3_PB_pbsv_9464:HG3_Ill_Krunchall_13206:HG2_Ill_Krunchall_13526:HG2_PB_pbsv_9718:HG3_PB_HySA_14563:HG3_Ill_MetaSV_5359:HG2_Ill_tnscope_1120:HG4_PB_pbsv_9742:HG4_PB_SVrefine2PBcRDovetail_4861:HG4_Ill_MetaSV_5414:HG4_Ill_GATKHCSBGrefine_6762:HG4_10X_allpass_1896:HG3_PB_assemblyticsfalcon_26848:HG3_PB_SVrefine2PBcRDovetail_4439:HG3_PB_SVrefine2Falcon1Dovetail_5931:HG3_Ill_scalpel_9433:HG3_Ill_manta_2285:HG3_Ill_SVrefine2DISCOVARDovetail_7263:HG3_Ill_GATKHCSBGrefine_6532:HG3_10X_allpass_1965:HG2_PB_assemblyticsfalcon_26945:HG2_PB_SVrefine2Falcon2Bionano_4543:HG2_PB_SVrefine2Falcon1plusDovetail_11993:HG2_Ill_MetaSV_5187:HG2_10X_SVrefine210Xhap12_6938;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6938:HG2_Ill_MetaSV_5187:HG2_PB_SVrefine2Falcon1plusDovetail_11993:HG2_PB_SVrefine2Falcon2Bionano_4543:HG2_PB_assemblyticsfalcon_26945:HG3_10X_allpass_1965:HG3_Ill_GATKHCSBGrefine_6532:HG3_Ill_SVrefine2DISCOVARDovetail_7263:HG3_Ill_manta_2285:HG3_Ill_scalpel_9433:HG3_PB_SVrefine2Falcon1Dovetail_5931:HG3_PB_SVrefine2PBcRDovetail_4439:HG3_PB_assemblyticsfalcon_26848:HG4_10X_allpass_1896:HG4_Ill_GATKHCSBGrefine_6762:HG4_Ill_MetaSV_5414:HG4_PB_SVrefine2PBcRDovetail_4861:HG4_PB_pbsv_9742;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0096;ClusterMaxSizeDiff=0.0096;ClusterMaxEditDist=0.0096;PBcalls=11;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=9;HG3count=12;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=-436;DistForward=-305;DistMin=-436;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:119447045-119447369;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4061.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:29:0|1:37:0:1:37:./.:0:0:0:0:0/1:26:13:0/1:28:8:.:.:.
chr8	120154542	HG2_Ill_breakscan11_1414	AATAATGCTGCACACCTACAATCATCTTATCTTCGACAAAGTTGACAAAAACAAGTAATGAGGAAAGAATTCCCTATCCAATAAATGGTGCTGGAATAACCGGGTAGCCACATGCAAAAGGCTGAAACTGGACCCCTTCTTTACACCACATATAAAAATCAATTCAACACGGATTAAAGATTTAAATTCAAACCCTAAAACTAAAAGAACCCTGAAGATAGCCTAGGGAATAGCATTCTGGACTTAGGACCAAGGAAAGGTTTCTTGACAAAGGCACCAAAAACAATTGCAACAGAAAGAAAAATTGACAAATGGGACCTAATTAAATTAAACAGCTTCTGCCAGCAAAAGAAACTATCAACACAGTAAACAGACAACCTACAGAATGGGAGAAAATATTTGCAAACTATGCATCTAACAAAGGCCTAATATCCAGAATCTGTAAGGAACTCAAACAAATTCAGAAGCAAAAAACAACCCTATTAAAAATTGGGCCAAGGACATGAACAGGCACTTTTCAAAAGAAGACATATACACAGCCAACAAAGATATGAGAAAATGCTCAACATCACTAATCATTAGAGAAATGCAAATAAAAACCACAATGAAATATGATCTCACACCAGTCAGTATGGCTATTATTAAAAAATAAAAAAACAGATGCTGGTGAGGTTTTGGAGAAAAGGGAATGCTTATACACTGCAAATAGGAACATAAATTAGTTGAGCAACTGTGGAAAGCAGTTTGGATATTTCTGAAATAACTTAAAATAGAATTTCCATTCAACCCAGCAATCCCATTTTTGGGTATACATCCAAAGAAATATAAAACATTCTACCATAAAGACACATGCACGTGTATGTTCATTGTAGCACTATTCACAATATCAAAGACATGAAATTCCATCAACGGTAGCCTGGACAAAGAAAATGTGATACATATACAACATGAAATACTATGCAGCCACAAAAAAAGAATGAGATCATGTCTTTTGCAGCAATATGGATAGAGCTGGAGACCATTGTCCTAAACGAACTAACACAGGAACACAAAACCAAATACTGCACGTTCTCACTTATAAGTGAGAGCTAAACATCGAGTACACATGGATATAAAGAAAGGGACAATTGATACCATGGCCTACTTGAGGGTGGAGGGTGGGAAGAGGGTGAGGATTGAAAAATAACCTATCCAGTACTATGCTGATTACCTAGCTGACAAAATAACCTGTACACCAAACACCTGCAAGATGCAATTTATCTATTTAACAAAGCTGCACATCTACCCCTGAACCTAAAATAAAAGTTAAAAATAATAATAAAATACATTTTAAAAGGGGGAGTAAAAAGGATGTATACTTGCATGTGTGTCAGGAGGTAGGCATGAACAATTACTAGCAAATATACATTTGTTTTAAAATGAGCACCTACAATTGGTACAAGTATTTCCAATAATCTGAGGATATCAGCTAATATTAAACTTGTTCAATTTTTTTTAAACTTAGAATGTAATTGATATGGTGAGAAAGTTGCCTTGTTGGTCCAACCACTGTTAGACAAGGCTAAGCAGAACCAAAAGCTTTCCTTTCTACCTGCATGCAACACCATGTGCCTCTTCCCTCAGTTTTCTGCATTTAATTCTTTTTTACATCTACTTTAATCTATTCTAACTCTTAAATGATGTAAAGGTTGACCCACTAACATTTCTGCATTGCTCCTCTTTCCAATGTACACTAAATACCTGTGTTCATAGATGTTACTAGCATCTGCTTCACTGAATCAACTGCATGGCTGAAAAAGAATTTGTAGGATGAGAGAGGGAGTTTTCTAATCTTTGGTCTCAAATGATAACACACACAGTAAAGTACATGGCTTTGATCCAACCCTCTTTATATATACATTATGTATTTTTACTTCCTTGTGTCAAGAAACAAGTAATGCTTTACCAAGAATGTAGACTAACTGGTTTGATTAGTTTTATTTCATTTTAAAAATATTAATGAAAAGGAACAGAAAGCAAATGTTTAATTTTAGTTTCACAAAAACCTACATGTGTAATGTTAACATCTGTTGAACACTGAAAAATACATTAATGAACAGCTATTTCATTAAAGATAAAAAAGGGAAACAATAGCTTAAAATAAGCCTGTGTTATATCAATACACACTCTGATTAAGAAAATATTTTTATTACTAACCTATTGCATTTGGCTTATGTGATTTTCTGCATCAGTTAGTTTTGTGACTAAATATTTCTCATGTATTTTTCTCACCAAAATACTTTTATAAAGCATATATTTTAGGAATTTTTATTTTCCTGTAAATTTAAGAATTAAAGTCCCAAAAAGAAGGAAAGAAAGCCCTTATATTGTGAGTATTGCTCTTCTTCTGTATTTTCTTGACAAATCACCATCCTGTTAATATGTGTAAAGTACCTATTATGTGTGTGGTTTTTCTAGTTAATATGCACATTATTCTGAGATACCAAGCATATAAAAATGATAAGACACAGTCCAGCTTGGAACATACTTTTAAAAGGAAAAAAAAATCTATTAGCTATTTTTAAATATTTATTTTTTATCTGAAAATCAACAGATTCACTTATTATATGGTGTTCAGTGAAACTTAAAAATTTAAATAATACACATATGTCAAGGCAACACTTTCCCCTACTCAAGGACCATAATTAAACTGAACTTATTTATAGGATGAACAGCTCATTCAGGTTTGCCCAAGAATGTACCAGTTTTAAAGGTGAGGTCTTATATCCTGAAAACTCCCTCAATCCTGCACAAGTTGGAACAGGTGGTCACCCGACTTACACATGACCAGATCCAGGAAAGTTCAATTTAAAAAATACAAAGGGAGTTTCTCATATATGCTTAGCACTCTGCTAGGAATAGCAGGGAATAGTATGTGAACTAACCCATATCTCAAACTAAAAGCTTGATCTTACAAGGTAACACATATAGTTAAATACTATGTTTTAGTTTTATTTATCTCTTTATTTGAAAAAGCAATAAGAAATTTCAATGCCTTATACCACTGAAACAACAAAAAAATGCAAACCTTCAAATCATCCAGTTCTCAGGGGCAATCCCTACAGTAGTCATTTCAGTCTTGTAGTACCACATTCTAGGCTAGTCATGCTAGAAATGTCAGTTGAACACAAGCACTTTATAATTACTGAGGGAACAATAACTTTGAATTAGTTCACCTTGGGGTTTTGTACCTATATTTTTAAGCCACAGTGTGAATTAATATCTGTTTTCATACTAATTTACAGTAAATGTTTCAGGACATGAAGGAAAGTTATTCTATCTTTTGCTTCTTCAAAAATGTTGCCACTAAAGTAATTTGGAACCTAAAGCAAACACTTTAACTCAATCCAAGTGTGTTATATTTCCCTTTTATGTAACTAAGATAAAAACTGGTGAGCTTTGGCTTACCATTGGCTTTTGAAATTGCACTGTCTTCTTTCTTTTTTTGAGACAGGGTCACACTCTGTTGTCCAGCCTGGAGTGCAGTGGCATGATCTTAGCTCACTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCATGTCTCAGCCTCCTGAGTAGCTGGAATTACAGGAGTGAGCCACCACACCCCACTAATTTTTGTATTTTTAGTAGAGATGGAGTTTTGCCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGTGATCCTCCCAGCTTGGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCACCGTGCCTAGCCCAAATTTGCACTAGTTTATTGACTGAAGGAAGTGAGCTCTTCATTTCAATTGGGCCACTCAGAGCTTCATATTCATATTTTTCTGTTTTTGTGGTTTTTCTAGACAATAGATTTTGATATTATTTAATACTGAATTTGTGATAAAATACCTAGCCAAAATAGAAGCAGCAAATCTTTGAATAGTCACTGATAATTATCTTAGGTCTTCAATGAAGAGTTGCTAAGGAAATACTCCAAGCAAAATAATTTTATTTACTAAGGTTATTAAGATTCTTATAAATAATAAATAACATTTATTCATTCTCACTCTGGGATAGCGTATCTACACTTGATTATCTCATAGACATCTCAGATTTAACATGTCCAAAAATAATAGCTCATTTTCTTTTTTCTCAAACCAGTCCTCCTTTCTCCTCCTGTCCTCTCCTCTTCTCTGTAAATGGCATGGTCATCCCATCTGCCTAAGCCAAAAGCCTAGGATTCTGTCATGAGTCCCACTTTCTCCTCTCCATTCCCTTGTGCTAATTGCCATCAAGACCTCTTTATCTTACCTTGAATATCTGGAATCTATGTCCTTCTCTCCATCGCCACTCATACCACCTTAGACCAAACTACCAGTGTTCCTTTTCTGAATCAATAGCCTCCTAACCATGTACCCTCCACTCTTGCCCATTTTAAATCCACACAGTGTTAAAAGTACAAATGTTCCTCAACTGACGATGGGGTTATGTTCTGATAAACCCATCATAAGTTGAAAATATAAGTTAAAAGTGAATTTAACACACCTAACCCACCAAACATTATAGTTTAGCCTAGTGTACCTTAAACATGCTCCAAACACTTACATTAGCCTACAGCTGGGCAAAATCATCTAACACAAAGCCCATTATGCAATAAAGTGTTAAATATCTCATGTTATTTATTGAATATGCTACTGAAAGTGAAAAAAGAATGATTGTACTCAATGTACAGTTTCTTTGGGATGTTTATTTCTTTTGCACAACTGTAAACTTGAAAATCCTAAGTTGAACCATTGTAAGTTGAACCATCATAAGTTAAGGACTGTCTGTATACTTAAAATATACATTGGGGTCACTTACCTGTTTCAAAGCCTGGCAATGATTTTCTACTGCACTTGGAAGAGAATTCAAATTTCCAAACTGGGCCTGTAATATCCTTCATGACCTTTCTTTGCCTGTCATTTCAGGTTTATTTTCTGCCTCTCTGTTGATATGCTGCTGGCTTTATTCACATGGATTCTGTGAACAAGACAAGGCCCTTCCCAGGGCTCCACAGAAACACCCTCTCTCTCCCACCAAATTTTCTCCCTGTTACTGCATCATTTACATGTCACCTTCTCAGAGATGCCTTTCCTGATCACTCTACTGAGAATGGGATGCACTACCCTGATCACTCTGTCATTTTTACAACTTATAACCATTTGCTTATTTGCCTCTGTACTATTTTTGGTATGTTCCATAAGATTATAAGGTCCATGAAGCAGAGGCTAGGTGCCCTGCACACATGTCTGTTTGTAGTACCTAGAGCCATGACTAAAACAAAATAAGTGTTAAATTAGTACCTGCTACAGAGCCCAAGTTCTTACTGGTCCTAAGATTCTGCAAGAACCAAAGGCTCAGGGGAACTGGCAAAAATCAAACATGAGCCTTAAAGGCCTCTCTTCTACCTGATGAGAAATTATAAAATTCTGATTTCTCTAATTTTACCATTCTTTCTACATTTCTTAGCTGTAATTCTTCCATTGCAAAGGAGACTTATGCTGCATATGTTTCATATACTTCATAATGTGGGTACTTGAAATTACTAAATAACATGAATTATGAAACTCAGACAGGAACTTTGAATAGACTTAACAAAAAAAATTCTGAGAGTAAGAGAGGAAAAATATTGGCTATTTTTCCTGCCATTCTTGGTCAAGACTCTTCCTCTTATCTAGGCAATAGAGTAACTATTACCTTCTTATGGGATCAGTAATGAGAAATTGTGCATTTTCTATTAGAATAAATTATACTTATTAGAACAGTAGGTAAGCCTCCCTACATAGAAATTACATTGAAATATCATGATTTTCTTGTTTAAGTCTTGAGAGTAATAGTTTCAAGGCTTTCTTGTTTAAGTCATGAGTTTAGTATTATTGGTAGAATCACCATGAGCTAAAATTTCTTCAAACACCAAAAGTGATTCACTTACTCATTTACCCATGAAACTTTCCCCTCTCTATATTCTCTTTATAGATAATCTAAAAAGAGAGACTTGAGGACATCATTTTAGAGGGAGAAAAAGGGAAGTGGTTTCTTTCTCACCTAAATTCTACTATTTTACCCATAAATGAACCAGTAAAATGAACTGAGCAACAGCTCTAAACACAAGTATAGCACCACCACAGATCTGGATGAATCAATCAGCCTCAAGCCATAAATCAGCAAGAGCCTGTGCAAACCAGAGCTCACTCAAGATAAAGAACACTAGTTGTGATAACAGAAAAAAGCTCAAGTTTTAGGAAAAAAGTATATAATAATGGTTTCCACCATCACATTTGCTTGGGATTGGTGTCAGCTTCTGGGGGACTGTTTAGATTTGCTTGGGAAAAGCTGGCCATATGAAGGAAGTGCTGATTCTCCTGATTGGTGGGTACACAGGAAGTTGTATGTAGGAAATCTAGATTTTCCTTACAGAATTTTTATCATAAAGACCAATGCATCCATAGGTCTACAGTATAGGAATTCATCTGCATATGAAACAACCTTCTAGGAAACAAATTACCTTAAGAAAGAAGTTAATATTGAGCCACACAAGAAGCTCAAGGCTAAATGAAGAAAGAACAAGAAAAGATTTAAAGGTACAGTCCCTCTTCTCTTTCCAAAGTCCACTGCTGGAGCCTATGCT	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5188:HG3_10X_allpass_1966:HG2_10X_allpass_1638:HG3_PB_pbsv_9466:HG3_Ill_Krunchall_13213:HG3_PB_SVrefine2PBcRDovetail_4443:HG3_Ill_MetaSV_5361:HG2_PB_pbsv_9721:HG2_PB_SVrefine2PBcRplusDovetail_11206:HG2_Ill_breakscan11_1414:HG2_Ill_SpiralSDKrefine_17272:HG2_10X_SVrefine210Xhap12_6943:HG2_Ill_tnscope_1121;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6943:HG2_Ill_SpiralSDKrefine_17272:HG2_Ill_breakscan11_1414:HG2_PB_SVrefine2PBcRplusDovetail_11206:HG2_PB_pbsv_9721:HG3_Ill_MetaSV_5361:HG3_PB_SVrefine2PBcRDovetail_4443;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00657993;ClusterMaxSizeDiff=0.00657993;ClusterMaxEditDist=0.00657993;PBcalls=4;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-6673;DistBack=18846;DistForward=17089;DistMin=17089;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=8:120154543-120161217;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4062.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:72:55:0|1:63:1:1:22:./.:0:0:0:0:0/1:52:17:0/1:422:210:6595:.:.
chr8	120488898	HG4_Ill_GATKHCSBGrefine_6763	GAGGTGTTTGTAGTATTCTCTGATGGTAGTTCGTATTTCTGTGGGATTGGTGGTGATATCCCCTTTATCATTTTTCATTGCGTCTATTTGATTCTTCTCTCTTTTTTTCTTTGTTAGTCTTGCTAGCAGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTAATTTTTTGAAGGGTTTTTTTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTCATTGTGATGTTAGGGTGTCAATTTTAGATCTTTCCTGCCTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTTGTGTCTTTGTTCTCATTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTCATGTACCCAGTAGTCATTC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_9745:HG4_Ill_Krunchall_13803:HG2_Ill_Krunchall_13533:HG4_Ill_MetaSV_5415:HG2_Ill_MetaSV_5189:HG4_PB_SVrefine2Falcon1Dovetail_5964:HG4_Ill_GATKHCSBGrefine_6763:HG4_10X_allpass_1897:HG2_PB_pbsv_9722:HG2_PB_SVrefine2PB10Xhap12_7074:HG2_PB_SVrefine2Falcon2Bionano_4546:HG2_Ill_GATKHCSBGrefine_6646:HG2_10X_allpass_1639;NumClusterSVs=13;ExactMatchIDs=HG2_10X_allpass_1639:HG2_Ill_GATKHCSBGrefine_6646:HG2_PB_SVrefine2Falcon2Bionano_4546:HG2_PB_SVrefine2PB10Xhap12_7074:HG2_PB_pbsv_9722:HG4_10X_allpass_1897:HG4_Ill_GATKHCSBGrefine_6763:HG4_PB_SVrefine2Falcon1Dovetail_5964;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0145682;ClusterMaxSizeDiff=0.0145682;ClusterMaxEditDist=0.0229406;PBcalls=5;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-482;DistBack=6615;DistForward=-478;DistMin=-478;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=8:120488899-120489383;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4063.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:0|1:30:0:0:24:./.:0:0:0:0:0/1:45:16:0/1:40:13:.:.:.
chr8	121681672	HG4_PB_SVrefine2PBcRDovetail_4868	TGAAAATGCTTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6951:HG4_PB_assemblyticsfalcon_26385:HG3_PB_assemblyticsfalcon_26864:HG3_Ill_Krunchall_13222:HG2_Ill_Krunchall_13545:HG2_PB_assemblyticsPBcR_26211:HG4_Ill_Spiral_806:HG4_PB_pbsv_9752:HG3_PB_pbsv_9473:HG2_PB_pbsv_9728:HG2_Ill_breakscan11_1415:HG3_Ill_MetaSV_5363:HG2_Ill_tnscope_1122:HG4_PB_SVrefine2PBcRDovetail_4868:HG4_PB_SVrefine2Falcon1Dovetail_5970:HG4_PB_HySA_14151:HG4_Ill_SVrefine2DISCOVARDovetail_7049:HG4_Ill_MetaSV_5417:HG4_Ill_GATKHCSBGrefine_6768:HG4_10X_allpass_1898:HG3_PB_SVrefine2PBcRDovetail_4448:HG3_PB_SVrefine2Falcon1Dovetail_5940:HG3_Ill_GATKHCSBGrefine_6539:HG3_10X_allpass_1968:HG2_PB_SVrefine2PBcRplusDovetail_11210:HG2_PB_SVrefine2PB10Xhap12_7077:HG2_PB_SVrefine2Falcon2Bionano_4551:HG2_PB_SVrefine2Falcon1plusDovetail_12002:HG2_Ill_manta_2798:HG2_Ill_MetaSV_5191:HG2_Ill_GATKHCSBGrefine_6648:HG2_10X_allpass_1640;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6951:HG4_PB_SVrefine2PBcRDovetail_4868:HG4_PB_SVrefine2Falcon1Dovetail_5970:HG4_PB_HySA_14151:HG4_Ill_SVrefine2DISCOVARDovetail_7049:HG4_Ill_MetaSV_5417:HG4_Ill_GATKHCSBGrefine_6768:HG4_10X_allpass_1898:HG3_PB_SVrefine2PBcRDovetail_4448:HG3_PB_SVrefine2Falcon1Dovetail_5940:HG3_Ill_GATKHCSBGrefine_6539:HG3_10X_allpass_1968:HG2_PB_SVrefine2PBcRplusDovetail_11210:HG2_PB_SVrefine2PB10Xhap12_7077:HG2_PB_SVrefine2Falcon2Bionano_4551:HG2_PB_SVrefine2Falcon1plusDovetail_12002:HG2_Ill_manta_2798:HG2_Ill_MetaSV_5191:HG2_Ill_GATKHCSBGrefine_6648:HG2_10X_allpass_1640;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0796178;ClusterMaxSizeDiff=0.0796178;ClusterMaxEditDist=0.0796178;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=2253;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=8:121681673-121682004;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4064.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:32:./.:16:16:6:16:./.:0:0:0:0:0/1:22:24:0/1:22:7:.:.:.
chr8	121854743	HG3_Ill_svaba_12381	TGGAAAACATATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1416:HG4_PB_HySA_14152:HG4_PB_assemblyticsfalcon_26386:HG3_PB_assemblyticsfalcon_26865:HG2_PB_assemblyticsfalcon_26963:HG2_PB_assemblyticsPBcR_26212:HG4_Ill_Krunchall_13816:HG3_Ill_Krunchall_13223:HG2_Ill_Krunchall_13546:HG4_Ill_Spiral_807:HG2_PB_pbsv_9729:HG3_PB_HySA_14579:HG3_PB_pbsv_9474:HG3_Ill_MetaSV_5364:HG2_PB_HySA_17527:HG2_Ill_tnscope_1123:HG2_Ill_MetaSV_5192:HG4_PB_pbsv_9753:HG4_PB_SVrefine2PBcRDovetail_4869:HG4_PB_SVrefine2Falcon1Dovetail_5971:HG4_Ill_svaba_12372:HG4_Ill_scalpel_9095:HG4_Ill_manta_2393:HG4_Ill_SVrefine2DISCOVARDovetail_7050:HG4_Ill_MetaSV_5419:HG4_Ill_GATKHCSBGrefine_6769:HG4_10X_allpass_1899:HG3_PB_SVrefine2PBcRDovetail_4449:HG3_PB_SVrefine2Falcon1Dovetail_5941:HG3_Ill_svaba_12381:HG3_Ill_scalpel_9442:HG3_Ill_manta_2286:HG3_Ill_SVrefine2DISCOVARDovetail_7274:HG3_Ill_GATKHCSBGrefine_6540:HG3_10X_allpass_1969:HG2_PB_SVrefine2PBcRplusDovetail_11211:HG2_PB_SVrefine2PB10Xhap12_7078:HG2_PB_SVrefine2Falcon2Bionano_4552:HG2_PB_SVrefine2Falcon1plusDovetail_12003:HG2_Ill_svaba_12262:HG2_Ill_scalpel_9331:HG2_Ill_manta_2799:HG2_Ill_SVrefine2DISCOVARplusDovetail_13169:HG2_Ill_GATKHCSBGrefine_6649:HG2_10X_allpass_1641:HG2_10X_SVrefine210Xhap12_6952;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6952:HG2_10X_allpass_1641:HG2_Ill_GATKHCSBGrefine_6649:HG2_Ill_SVrefine2DISCOVARplusDovetail_13169:HG2_Ill_manta_2799:HG2_Ill_scalpel_9331:HG2_Ill_svaba_12262:HG2_PB_SVrefine2Falcon1plusDovetail_12003:HG2_PB_SVrefine2Falcon2Bionano_4552:HG2_PB_SVrefine2PB10Xhap12_7078:HG2_PB_SVrefine2PBcRplusDovetail_11211:HG3_10X_allpass_1969:HG3_Ill_GATKHCSBGrefine_6540:HG3_Ill_SVrefine2DISCOVARDovetail_7274:HG3_Ill_manta_2286:HG3_Ill_scalpel_9442:HG3_Ill_svaba_12381:HG3_PB_SVrefine2Falcon1Dovetail_5941:HG3_PB_SVrefine2PBcRDovetail_4449:HG4_10X_allpass_1899:HG4_Ill_GATKHCSBGrefine_6769:HG4_Ill_MetaSV_5419:HG4_Ill_SVrefine2DISCOVARDovetail_7050:HG4_Ill_manta_2393:HG4_Ill_scalpel_9095:HG4_Ill_svaba_12372:HG4_PB_SVrefine2Falcon1Dovetail_5971:HG4_PB_SVrefine2PBcRDovetail_4869:HG4_PB_pbsv_9753;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0995185;ClusterMaxSizeDiff=0.0995185;ClusterMaxEditDist=0.0995185;PBcalls=18;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-874;DistForward=15587;DistMin=-874;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=8:121854744-121855077;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4065.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:./.:1:1:0:1:./.:0:0:0:0:1/1:0:48:0/1:2:10:.:.:.
chr8	123048334	HG4_PB_SVrefine2Falcon1Dovetail_5977	TCTCCACATATGCCAGCTGTGGTGGCTCATGCCTGAAATCCCAGCATTTTGGGAGGCCGAGGTGGATGGATAACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACGTGGTGAAACCCTGTCTCTACTAAAAAAATAAAATAAAAAATTAGTCGGGCATGGTGGTGAACACCTGTAATTCCAGCTACTGAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCAAGATTGGATTGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAGAAAAAAAGCAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6956:HG2_Ill_breakscan11_1417:HG4_PB_pbsv_9763:HG4_PB_HySA_14163:HG2_PB_pbsv_9739:HG4_Ill_MetaSV_5421:HG4_Ill_GATKHCSBGrefine_6773:HG4_10X_allpass_1900:HG2_Ill_SpiralSDKrefine_17287:HG2_Ill_GATKHCSBGrefine_6653:HG2_10X_allpass_1642:HG2_Ill_Krunchall_13555:HG4_PB_SVrefine2Falcon1Dovetail_5977:HG3_PB_SVrefine2Falcon1Dovetail_5947:HG2_PB_SVrefine2PBcRplusDovetail_11215:HG2_PB_SVrefine2Falcon1plusDovetail_12009:HG2_Ill_SVrefine2DISCOVARplusDovetail_13177;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6956:HG4_PB_SVrefine2Falcon1Dovetail_5977:HG3_PB_SVrefine2Falcon1Dovetail_5947:HG2_PB_SVrefine2PBcRplusDovetail_11215:HG2_PB_SVrefine2Falcon1plusDovetail_12009:HG2_Ill_SVrefine2DISCOVARplusDovetail_13177;NumExactMatchSVs=6;ClusterMaxShiftDist=0.038633;ClusterMaxSizeDiff=0.038633;ClusterMaxEditDist=0.0652819;PBcalls=7;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=63879;DistForward=-259;DistMin=-259;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=315;REFWIDENED=8:123048335-123048979;PctSeqSimilarity=0.9247;PctSizeSimilarity=1;PctRecOverlap=0.7825;SizeDiff=0;StartDistance=-72;EndDistance=-72;GTMatch=0;TruScore=90;MatchId=4066.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:44:36:0|1:42:11:2:19:./.:0:0:0:0:0/1:45:18:./.:31:3:.:.:.
chr8	124654291	HG2_PB_assemblyticsPBcR_26242	GGTGTAAGTCGAAATTATGTAGGGTGAAGAGGTAAGAGAGGTGTGTATCAGGTAGT	G	20	PASS	ClusterIDs=HG3_PB_pbsv_9486:HG4_Ill_Cortex_3715:HG4_PB_pbsv_9768:HG3_Ill_manta_2289:HG3_Ill_Cortex_3746:HG2_PB_PB10Xdip_29352:HG2_Ill_manta_2803:HG2_Ill_Cortex_9071:HG3_Ill_Spiral_10334:HG4_Ill_250bpfermikitraw_13159:HG4_Ill_150bpfermikitraw_12617:HG3_Ill_250bpfermikitraw_12866:HG3_Ill_150bpfermikitraw_12483:HG2_Ill_250bpfermikitraw_13251:HG2_Ill_150bpfermikitraw_12439:HG2_PB_HySA_17558:HG4_Ill_svaba_12391:HG3_Ill_svaba_12406:HG2_Ill_svaba_12288:HG2_PB_pbsv_9744:HG3_PB_HySA_14618:HG4_PB_assemblyticsfalcon_26408:HG4_Ill_scalpel_9105:HG4_Ill_Krunchall_13835:HG4_Ill_GATKHC_15867:HG4_Ill_GATKHCSBGrefine_6783:HG3_PB_assemblyticsfalcon_26895:HG3_Ill_scalpel_9459:HG3_Ill_Krunchall_13244:HG3_Ill_GATKHC_15786:HG3_Ill_GATKHCSBGrefine_6549:HG2_PB_assemblyticsPBcR_26242:HG2_Ill_scalpel_9347:HG2_Ill_Krunchall_13568:HG2_Ill_GATKHC_15837:HG2_Ill_GATKHCSBGrefine_6659:HG4_10X_allpass_1902:HG3_10X_allpass_1972:HG2_10X_allpass_1643;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6659:HG2_Ill_GATKHC_15837:HG2_Ill_Krunchall_13568:HG2_Ill_scalpel_9347:HG2_PB_assemblyticsPBcR_26242:HG3_Ill_GATKHCSBGrefine_6549:HG3_Ill_GATKHC_15786:HG3_Ill_Krunchall_13244:HG3_Ill_scalpel_9459:HG3_PB_assemblyticsfalcon_26895:HG4_Ill_GATKHCSBGrefine_6783:HG4_Ill_GATKHC_15867:HG4_Ill_Krunchall_13835:HG4_Ill_scalpel_9105:HG4_PB_assemblyticsfalcon_26408;NumExactMatchSVs=15;ClusterMaxShiftDist=0.193548;ClusterMaxSizeDiff=0.193548;ClusterMaxEditDist=0.208696;PBcalls=9;Illcalls=27;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=14;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-55;DistBack=595;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:124654290-124654348;PctSeqSimilarity=0.9455;PctSizeSimilarity=0.9016;PctRecOverlap=0.8871;SizeDiff=-6;StartDistance=-1;EndDistance=-7;GTMatch=0;TruScore=91;MatchId=4067.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:69:1/1:1:18:1:16:./.:0:0:0:0:1/1:0:23:./.:.:.:.:.:.
chr8	125813443	HG4_Ill_GATKHC_15878	CTGGGTACTCTACTTCATAACTGGCCATATGAACTTAGGCAAGTCAATTTAACTTCTCTGGGCCT	C	20	PASS	ClusterIDs=HG3_Ill_Spiral_10340:HG2_PB_HySA_17579:HG4_PB_pbsv_9780:HG3_PB_pbsv_9496:HG2_PB_pbsv_9756:HG4_PB_assemblyticsfalcon_26419:HG2_PB_assemblyticsPBcR_26258:HG4_Ill_Spiral_809:HG2_Ill_Spiral_697:HG4_PB_HySA_14185:HG3_PB_HySA_14628:HG3_PB_assemblyticsfalcon_26905:HG4_PB_SVrefine2PBcRDovetail_4879:HG4_PB_SVrefine2Falcon1Dovetail_5985:HG4_Ill_svaba_12401:HG4_Ill_scalpel_9112:HG4_Ill_manta_2399:HG4_Ill_SVrefine2DISCOVARDovetail_7064:HG4_Ill_Krunchall_13847:HG4_Ill_GATKHC_15878:HG4_Ill_GATKHCSBGrefine_6791:HG4_Ill_Cortex_3718:HG4_Ill_250bpfermikitraw_13170:HG4_Ill_150bpfermikitraw_12627:HG4_CG_vcfBeta_6315:HG3_PB_SVrefine2PBcRDovetail_4460:HG3_Ill_svaba_12416:HG3_Ill_scalpel_9464:HG3_Ill_manta_2291:HG3_Ill_SVrefine2DISCOVARDovetail_7293:HG3_Ill_Krunchall_13254:HG3_Ill_GATKHC_15797:HG3_Ill_GATKHCSBGrefine_6554:HG3_Ill_Cortex_3748:HG3_Ill_250bpfermikitraw_12875:HG3_Ill_150bpfermikitraw_12488:HG3_10X_allpass_1973:HG2_PB_SVrefine2PBcRplusDovetail_11223:HG2_PB_SVrefine2PB10Xhap12_7088:HG2_Ill_svaba_12300:HG2_Ill_scalpel_9355:HG2_Ill_manta_2805:HG2_Ill_breakscan11_1419:HG2_Ill_SpiralSDKrefine_17307:HG2_Ill_SVrefine2DISCOVARplusDovetail_13186:HG2_Ill_Krunchall_13577:HG2_Ill_GATKHC_15849:HG2_Ill_GATKHCSBGrefine_6668:HG2_Ill_Cortex_9076:HG2_Ill_250bpfermikitraw_13262:HG2_Ill_150bpfermikitraw_12449:HG2_10X_allpass_1644:HG2_10X_SVrefine210Xhap12_6965;NumClusterSVs=53;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6965:HG2_10X_allpass_1644:HG2_Ill_150bpfermikitraw_12449:HG2_Ill_250bpfermikitraw_13262:HG2_Ill_Cortex_9076:HG2_Ill_GATKHCSBGrefine_6668:HG2_Ill_GATKHC_15849:HG2_Ill_Krunchall_13577:HG2_Ill_SVrefine2DISCOVARplusDovetail_13186:HG2_Ill_SpiralSDKrefine_17307:HG2_Ill_breakscan11_1419:HG2_Ill_manta_2805:HG2_Ill_scalpel_9355:HG2_Ill_svaba_12300:HG2_PB_SVrefine2PB10Xhap12_7088:HG2_PB_SVrefine2PBcRplusDovetail_11223:HG3_10X_allpass_1973:HG3_Ill_150bpfermikitraw_12488:HG3_Ill_250bpfermikitraw_12875:HG3_Ill_Cortex_3748:HG3_Ill_GATKHCSBGrefine_6554:HG3_Ill_GATKHC_15797:HG3_Ill_Krunchall_13254:HG3_Ill_SVrefine2DISCOVARDovetail_7293:HG3_Ill_manta_2291:HG3_Ill_scalpel_9464:HG3_Ill_svaba_12416:HG3_PB_SVrefine2PBcRDovetail_4460:HG4_CG_vcfBeta_6315:HG4_Ill_150bpfermikitraw_12627:HG4_Ill_250bpfermikitraw_13170:HG4_Ill_Cortex_3718:HG4_Ill_GATKHCSBGrefine_6791:HG4_Ill_GATKHC_15878:HG4_Ill_Krunchall_13847:HG4_Ill_SVrefine2DISCOVARDovetail_7064:HG4_Ill_manta_2399:HG4_Ill_scalpel_9112:HG4_Ill_svaba_12401:HG4_PB_SVrefine2Falcon1Dovetail_5985:HG4_PB_SVrefine2PBcRDovetail_4879;NumExactMatchSVs=41;ClusterMaxShiftDist=0.0775194;ClusterMaxSizeDiff=0.0775194;ClusterMaxEditDist=0.0775194;PBcalls=14;Illcalls=35;TenXcalls=3;CGcalls=1;PBexactcalls=5;Illexactcalls=32;TenXexactcalls=3;CGexactcalls=1;HG2count=20;HG3count=16;HG4count=17;NumTechs=4;NumTechsExact=4;SVLEN=-64;DistBack=3325;DistForward=36535;DistMin=3325;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=8:125813444-125813510;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4068.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:./.:16:4:8:21:./.:0:0:0:0:0/1:28:21:./.:.:.:.:.:.
chr8	126336797	HG4_PB_SVrefine2Falcon1Dovetail_5987	TCCATTTTGATAAAATTCTTTTTTTTTTTTTTTTTTTTTGAGACGAGTCTGGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGACAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_PB_HySA_17582:HG4_PB_assemblyticsfalcon_26421:HG2_PB_assemblyticsPBcR_26262:HG3_PB_assemblyticsfalcon_26910:HG2_PB_assemblyticsfalcon_27009:HG3_PB_pbsv_9498:HG2_PB_SVrefine2PB10Xhap12_7091:HG3_Ill_Spiral_10345:HG2_Ill_Spiral_698:HG3_PB_HySA_14632:HG2_PB_PB10Xdip_29367:HG2_PB_pbsv_9758:HG3_Ill_MetaSV_5369:HG2_Ill_tnscope_1124:HG4_PB_pbsv_9782:HG4_PB_SVrefine2PBcRDovetail_4881:HG4_PB_SVrefine2Falcon1Dovetail_5987:HG4_Ill_scalpel_9113:HG4_Ill_manta_2400:HG4_Ill_GATKHCSBGrefine_6793:HG3_PB_SVrefine2PBcRDovetail_4462:HG3_PB_SVrefine2Falcon1Dovetail_5959:HG3_Ill_SVrefine2DISCOVARDovetail_7298:HG3_Ill_GATKHCSBGrefine_6555:HG2_PB_SVrefine2PBcRplusDovetail_11225:HG2_PB_SVrefine2PB10Xhap12_7090:HG2_PB_SVrefine2Falcon2Bionano_4568:HG2_PB_SVrefine2Falcon1plusDovetail_12020:HG2_Ill_scalpel_9359:HG2_Ill_manta_2806:HG2_Ill_GATKHCSBGrefine_6670:HG2_10X_SVrefine210Xhap12_6967:HG2_Ill_breakscan11_1420:HG4_Ill_Spiral_810;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6967:HG2_Ill_GATKHCSBGrefine_6670:HG2_Ill_manta_2806:HG2_Ill_scalpel_9359:HG2_PB_SVrefine2Falcon1plusDovetail_12020:HG2_PB_SVrefine2Falcon2Bionano_4568:HG2_PB_SVrefine2PB10Xhap12_7090:HG2_PB_SVrefine2PBcRplusDovetail_11225:HG3_Ill_GATKHCSBGrefine_6555:HG3_Ill_SVrefine2DISCOVARDovetail_7298:HG3_PB_SVrefine2Falcon1Dovetail_5959:HG3_PB_SVrefine2PBcRDovetail_4462:HG4_Ill_GATKHCSBGrefine_6793:HG4_Ill_manta_2400:HG4_Ill_scalpel_9113:HG4_PB_SVrefine2Falcon1Dovetail_5987:HG4_PB_SVrefine2PBcRDovetail_4881:HG4_PB_pbsv_9782;NumExactMatchSVs=18;ClusterMaxShiftDist=0.170886;ClusterMaxSizeDiff=0.170886;ClusterMaxEditDist=0.170886;PBcalls=19;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-318;DistForward=-298;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=8:126336798-126337134;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4069.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:37:0|1:22:0:0:40:./.:0:0:0:0:0/1:19:12:0/1:24:8:.:.:.
chr8	126595121	HG2_PB_SVrefine2Falcon1plusDovetail_12022	ACACTCACAGAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCAAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCAAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGATGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCACATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAACCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTTTAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_9760:HG4_10X_allpass_1904:HG2_10X_allpass_1645:HG3_10X_allpass_1975:HG4_Ill_Krunchall_13853:HG3_Ill_Krunchall_13262:HG2_Ill_Krunchall_13583:HG2_PB_assemblyticsfalcon_27012:HG4_PB_assemblyticsfalcon_26427:HG2_PB_assemblyticsPBcR_26266:HG4_Ill_MetaSV_5427:HG2_Ill_tnscope_1125:HG4_PB_SVrefine2PBcRDovetail_4882:HG4_PB_SVrefine2Falcon1Dovetail_5989:HG4_Ill_GATKHCSBGrefine_6795:HG3_PB_SVrefine2PBcRDovetail_4464:HG3_Ill_SVrefine2DISCOVARDovetail_7301:HG3_Ill_MetaSV_5371:HG3_Ill_GATKHCSBGrefine_6557:HG2_PB_SVrefine2PBcRplusDovetail_11227:HG2_PB_SVrefine2PB10Xhap12_7094:HG2_PB_SVrefine2Falcon2Bionano_4570:HG2_PB_SVrefine2Falcon1plusDovetail_12022:HG2_Ill_breakscan11_1421:HG2_Ill_SVrefine2DISCOVARplusDovetail_13191:HG2_Ill_MetaSV_5203:HG2_Ill_GATKHCSBGrefine_6672:HG2_10X_SVrefine210Xhap12_6974:HG4_PB_pbsv_9785:HG3_PB_pbsv_9501;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6974:HG2_Ill_GATKHCSBGrefine_6672:HG2_Ill_MetaSV_5203:HG2_Ill_SVrefine2DISCOVARplusDovetail_13191:HG2_Ill_breakscan11_1421:HG2_PB_SVrefine2Falcon1plusDovetail_12022:HG2_PB_SVrefine2Falcon2Bionano_4570:HG2_PB_SVrefine2PB10Xhap12_7094:HG2_PB_SVrefine2PBcRplusDovetail_11227:HG3_Ill_GATKHCSBGrefine_6557:HG3_Ill_MetaSV_5371:HG3_Ill_SVrefine2DISCOVARDovetail_7301:HG3_PB_SVrefine2PBcRDovetail_4464:HG4_Ill_GATKHCSBGrefine_6795:HG4_PB_SVrefine2Falcon1Dovetail_5989:HG4_PB_SVrefine2PBcRDovetail_4882;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0401764;ClusterMaxSizeDiff=0.0401764;ClusterMaxEditDist=0.0401764;PBcalls=13;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6013;DistBack=32968;DistForward=-6006;DistMin=-6006;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=8:126595122-126601142;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4070.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:101:1/1:0:27:0:21:./.:0:0:0:0:1/1:0:41:1/1:0:366:5967:.:.
chr8	127192207	HG2_Ill_GATKHCSBGrefine_6676	TAAATATGGGCCACAACTCCATTTCTGTCATTTTATAACTGTGGTATATTGGGCAATTTTCTTAAATTGTTGGCTCCAATTTCCACAACTGTAAGGTGAAGATAATATTGCTTTCTTCTTAAGGTCTTTGAAAAAATTAGGAAGTTTTTTTAACAACCTGGTTTGTAGAAAACTTTCAAAGAGTATTACGTTCTTTCCATTTTTCTTTTATGTCAGTGCATCCTTATTACTATAATAATTCCTGGAATTTATAACCCAGTAAGTATAAAATTCAATGTTGAACATAACTGGCAAATATTTTAACAAAGTTAAAAGTGGTTTTTAAAAATCCCTCAAAATAATAGCATAAGTAAAATAATGTTGGTCTTAAAAGAGATTAAGGAACCCAACCTAAAGATTATAGCCATCTAAAATTCCACTCCCTAAAATAGCTTTTTGATTTTTCACATCAGAGAATTCTGGACAATTGTTTAAAACTGTTGTAAAAGTTATCATCCCAGAGGTGATATGATGTGATTCTAATCTCTCCCTATCCCACTTTTATCCTGCAAAGTTACTTGTTCAAACACAGAATTGTTTATATCACTTTCTTCTCTTAAACCTGTCTCCCACATGCCTATAACAAAAAGTTTAAACCCCTTAGCAAGACAATCTAAGATTTTCCCAATTTCCAAAGTATACATCTAATTCAATCTAGCACTCTGAGTACTACAGATCAGCTTCACTGAACTATTTATGCTTTGCAATATATTTGTATACCCCTGTTCATTATATTGTTCTCTCTGCTCACATCTCTCTTCTTGGCTGGGTGAAACCTTATCCATCTTTCAAATCTTGGCCCCAATGTTGTGTTGTGTGTTCCATGGAAAGTAAGTCACTCCTTCTCTGTTCCTATAATGCTTCGTTATAATTCCTACTTCTGCCTTATGTTATAGCTAGTCATATGCCTAGAATCCTAGTTGTATTATGAGCTCAATTCAATCTATATTCAAAGTATAGAGCCTATATTTACCAGATACAGTGAATACCTTATGATTGCACAAATATGTTGAAAATAAGGAAGATTAATTATTGTGAGCTTCTAAAGGAAGATAAATGTAAAGTGAATGTTAAACTTGTAAGGTGGAAAATATATGTGCTTTAATAAAAGATAATGAAAAAGTTGTGTTAGTTGGTGTGAATGCCAAGGCCAGTGCTTTGAGGGCTTGAAAAAGCAAAAGTATCAGCAAACCAGAACAAATGGGTAGAGACAATCTAGGGAGAGGCAGTGGAAGCTAAAGAAAGCAGGAACAACTGATCCTTAATCTCCTATTTTTCCCACATGGTCTTTCCCAGCAAATTCAGTCCCCAGGAAACAGCTCCTAATTTGATTCAGTTCTGTAGCACACACAGTCTTTAGCATTTTGGGGATGCCTAACTAAAGTTCTTAAGGTTGCCTTTCCTTCCCACTAAACTATAAGCTTCCTGAAACCTGAAATTACATCATTGCCCTCAATCCATGTATATACATCAGAAAGTTTTTGTTGAATTAAATGACCTAAAAAAGTCCTTAAATCCCTAACCCTGAGTTTGACTTTGTTGGAACAGACCATAAAATGGTACTACAAAGGTGAGGGTCTTTATTATTCATCTGGTCCTCCCTTTTATCTATCTCTCCCTCCAGAAATACTTCTTTATTCATTTATCTTATTTTCATTGAGCCTGCTAAATGGTGGTCCTGTCAAGGTGCTTGGATATAACAGAGAACAAGACTAAGTCCTTAACTTAATAGAGCTTACTTCTTGCTGAAGGAGACAGATAAACAATGAATAAACAAATACAAAATAACATATCTTAAGGAGTGATAACTGCTGGGAAGAAAATGAAAGCTCAGTATGGGTCACAGAGTGATGGAGTAGCAACAGGAAATGATTTTCCCTAGAATTGTCAGGAAAGGCATCACTGAGCAGGTGCTCAATGATCTGAGGCACACGTATTGTGAGGAATAAAGCCACGTGGTGATGCTGCAGTTAGAATATTCCGAGACTTTCTCAACTAATATTGATGCTGTTCTTAAGCTCATTTGCCACATTACTTGCAGTGAAATCTGATTCATAGAGCATAATTTTTTCTTCGTAGTTCTTCAGCATCCATTACGAATTACTTTGTTAGTCTCTGAACATTTTCTTTTAATAGTTATTCAATTACTCACTAATATCTGAAATGAGATATGGTCCCTGTTAATTTTCGGGTTATTTTTTCCATAGACACATTGAAAATTAGAATCCCCTTTGCTTAATTTTCTCTGTTCTTTCTCCCTCTATAAAGTCTCATTAAGTTTATTGCCCATCCACAGGTTTGATGGCTGGCATTGACAGCCAGCAGC	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_13860:HG3_10X_allpass_1978:HG3_PB_assemblyticsfalcon_26919:HG2_PB_assemblyticsPBcR_26272:HG2_PB_assemblyticsfalcon_27021:HG3_PB_pbsv_9505:HG3_PB_SVrefine2Falcon1Dovetail_5963:HG2_PB_SVrefine2PBcRplusDovetail_11230:HG2_PB_SVrefine2PB10Xhap12_7098:HG2_PB_SVrefine2Falcon2Bionano_4573:HG2_PB_SVrefine2Falcon1plusDovetail_12025:HG2_Ill_SVrefine2DISCOVARplusDovetail_13194:HG2_Ill_GATKHCSBGrefine_6676:HG2_10X_SVrefine210Xhap12_6979:HG2_Ill_tnscope_1127:HG4_Ill_Cortex_3721:HG3_Ill_Cortex_3753:HG2_PB_PB10Xdip_29372:HG2_Ill_Cortex_9081:HG2_Ill_SpiralSDKrefine_17322:HG2_Ill_breakscan11_1422:HG2_10X_allpass_1647:HG4_PB_pbsv_9788:HG2_PB_pbsv_9763:HG4_Ill_MetaSV_5430:HG4_10X_allpass_1906:HG3_Ill_MetaSV_5375:HG2_Ill_MetaSV_5206;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6979:HG2_Ill_GATKHCSBGrefine_6676:HG2_Ill_SVrefine2DISCOVARplusDovetail_13194:HG2_PB_SVrefine2Falcon1plusDovetail_12025:HG2_PB_SVrefine2Falcon2Bionano_4573:HG2_PB_SVrefine2PB10Xhap12_7098:HG2_PB_SVrefine2PBcRplusDovetail_11230:HG3_PB_SVrefine2Falcon1Dovetail_5963:HG3_PB_pbsv_9505;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00380952;ClusterMaxSizeDiff=0.00380952;ClusterMaxEditDist=0.00380952;PBcalls=12;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-2364;DistBack=36630;DistForward=5699;DistMin=5699;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=8:127192208-127194574;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4071.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:114:1/1:4:26:0:27:./.:0:0:0:0:1/1:0:18:1/1:4:155:2327:.:0.998088
chr8	127248961	HG3_Ill_manta_2295	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTAGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGC	ATT	20	PASS	ClusterIDs=HG4_PB_pbsv_9789:HG3_PB_HySA_14638:HG4_PB_HySA_14190:HG2_PB_HySA_17592:HG4_Ill_scalpel_9121:HG3_Ill_scalpel_9473:HG2_Ill_scalpel_9366:HG4_PB_SVrefine2PBcRDovetail_4885:HG4_Ill_manta_2404:HG3_PB_assemblyticsfalcon_26921:HG3_PB_SVrefine2PBcRDovetail_4467:HG3_PB_SVrefine2Falcon1Dovetail_5964:HG3_Ill_manta_2295:HG2_PB_assemblyticsPBcR_26275:HG2_PB_SVrefine2PBcRplusDovetail_11231:HG2_PB_SVrefine2PB10Xhap12_7099:HG2_PB_SVrefine2Falcon2Bionano_4574:HG2_PB_SVrefine2Falcon1plusDovetail_12026:HG2_PB_PB10Xdip_29373:HG2_Ill_manta_2809:HG2_Ill_SVrefine2DISCOVARplusDovetail_13195:HG2_10X_SVrefine210Xhap12_6980:HG2_PB_assemblyticsfalcon_27023:HG4_Ill_MetaSV_5431:HG2_Ill_MetaSV_5207:HG3_Ill_MetaSV_5376:HG3_PB_pbsv_9506:HG3_Ill_Krunchall_13271:HG2_PB_pbsv_9764:HG2_Ill_Krunchall_13595:HG4_10X_allpass_1907:HG3_10X_allpass_1979:HG2_10X_allpass_1648:HG2_Ill_tnscope_1128:HG4_PB_SVrefine2Falcon1Dovetail_5991:HG2_Ill_SpiralSDKrefine_17325:HG4_PB_assemblyticsfalcon_26431;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6980:HG2_Ill_SVrefine2DISCOVARplusDovetail_13195:HG2_Ill_manta_2809:HG2_PB_PB10Xdip_29373:HG2_PB_SVrefine2Falcon1plusDovetail_12026:HG2_PB_SVrefine2Falcon2Bionano_4574:HG2_PB_SVrefine2PB10Xhap12_7099:HG2_PB_SVrefine2PBcRplusDovetail_11231:HG2_PB_assemblyticsPBcR_26275:HG3_Ill_manta_2295:HG3_PB_SVrefine2Falcon1Dovetail_5964:HG3_PB_SVrefine2PBcRDovetail_4467:HG3_PB_assemblyticsfalcon_26921:HG4_Ill_manta_2404:HG4_PB_SVrefine2PBcRDovetail_4885;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0155521;ClusterMaxSizeDiff=0.0155521;ClusterMaxEditDist=0.025;PBcalls=19;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=-132;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=8:127248961-127249282;PctSeqSimilarity=0.9969;PctSizeSimilarity=1;PctRecOverlap=0.9938;SizeDiff=0;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4072.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:2:19:0:29:./.:0:0:0:0:1/1:0:44:0/1:2:18:.:.:.
chr8	129465153	HG3_PB_SVrefine2Falcon1Dovetail_5976	TCCAGCTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTCAGTCTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTGACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTGGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATCTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTCTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCAGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCCTCCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCATGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6992:HG3_PB_assemblyticsfalcon_26940:HG2_PB_assemblyticsPBcR_26294:HG4_PB_assemblyticsfalcon_26449:HG2_PB_assemblyticsfalcon_27043:HG4_Ill_Krunchall_13879:HG3_Ill_Krunchall_13291:HG2_Ill_Krunchall_13620:HG2_Ill_tnscope_1129:HG4_PB_pbsv_9804:HG4_PB_SVrefine2PBcRDovetail_4895:HG4_PB_SVrefine2Falcon1Dovetail_6001:HG4_Ill_SVrefine2DISCOVARDovetail_7079:HG4_Ill_MetaSV_5434:HG4_Ill_GATKHCSBGrefine_6815:HG3_PB_pbsv_9525:HG3_PB_SVrefine2PBcRDovetail_4470:HG3_PB_SVrefine2Falcon1Dovetail_5976:HG3_Ill_SVrefine2DISCOVARDovetail_7321:HG3_Ill_MetaSV_5378:HG3_Ill_GATKHCSBGrefine_6576:HG2_PB_pbsv_9781:HG2_PB_SVrefine2PBcRplusDovetail_11238:HG2_PB_SVrefine2PB10Xhap12_7111:HG2_PB_SVrefine2Falcon1plusDovetail_12033:HG2_PB_HySA_17618:HG2_Ill_SpiralSDKrefine_17335:HG2_Ill_SVrefine2DISCOVARplusDovetail_13211:HG2_Ill_MetaSV_5209:HG2_Ill_GATKHCSBGrefine_6689;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6992:HG4_PB_pbsv_9804:HG4_PB_SVrefine2PBcRDovetail_4895:HG4_PB_SVrefine2Falcon1Dovetail_6001:HG4_Ill_SVrefine2DISCOVARDovetail_7079:HG4_Ill_MetaSV_5434:HG4_Ill_GATKHCSBGrefine_6815:HG3_PB_pbsv_9525:HG3_PB_SVrefine2PBcRDovetail_4470:HG3_PB_SVrefine2Falcon1Dovetail_5976:HG3_Ill_SVrefine2DISCOVARDovetail_7321:HG3_Ill_MetaSV_5378:HG3_Ill_GATKHCSBGrefine_6576:HG2_PB_pbsv_9781:HG2_PB_SVrefine2PBcRplusDovetail_11238:HG2_PB_SVrefine2PB10Xhap12_7111:HG2_PB_SVrefine2Falcon1plusDovetail_12033:HG2_PB_HySA_17618:HG2_Ill_SpiralSDKrefine_17335:HG2_Ill_SVrefine2DISCOVARplusDovetail_13211:HG2_Ill_MetaSV_5209:HG2_Ill_GATKHCSBGrefine_6689;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00474865;ClusterMaxSizeDiff=0.00474865;ClusterMaxEditDist=0.00474865;PBcalls=15;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=11;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6113;DistBack=24597;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:129465154-129471281;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4073.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:121:1/1:1:35:0:27:./.:0:0:0:0:1/1:0:42:1/1:1:406:6060:.:.
chr8	129762519	HG2_PB_SVrefine2PBcRplusDovetail_11241	CATGGAATACTATGCAGCCATAAAAAATGATGAGTTCACGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGAAGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACGTATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAATAAAAAAAATTAAAAAAAACAAAACAAAACAAAAAACAATTAGATAGTATCCAAAATGAAGCATAGAGAAAAAAAATAGTTTAAAAAAACAACTTCAGGAATCTGTAACACAATATTATGCTGTCTAACATACATGTAATTGGAGTATCAAAGAGAAAAAGAAGAGAAGTTGCAGGAAGAGTGTTTAAAAATATACTGGCCCAAACTTAAAAAAAAACAATGAAGCGTATAAACACATAGATCAAAGAAACTCTGCATTCACCAAGAAGGATAATTGAAAGAAAACAAAACCAAAGTCTCTCATTATCAAATTGCTAAAGACAGAAATCATGAAAATCTTAAAGTAGCCAGAGTAAAAACCATACATTGTATATGAGATAAAGTCAAGACTAATCGCTGAATTCTCATCAGAATAAATCCAAGCCAGAAGACAACAGAATCACATTAATGTTTGAAAAAACAATAAAATATCATCAAGATACTATTTCATTTTATGTGAAAATATTCTTCATAAGTAAAAATTAAAACATGACATTTTTCAGGCAAACAAAAAACAGAAAATTTATCATCAGTAAAACTGCACTACCAAAAAATATTAAAGAAATTATTCAAGTTGAAGGGATATAATACCACATGTAAGTCTGGATCTACTCAAAGAAATGAAGGATACTAGAAATAGCAAACATGAGGATAAAGATTTTTTGAAATGGTTTTTTATAATGTTTTATATTATAGTTGTAAAAATGTATAACAATAGCACAAACTGTATGATGGAGAAATGGAAATGTATTGTGTAACATTCTTGTATTTCTTGAAATGGCAAATAGACTTTGAAGATAGTAAAGATTGATTATAACAAGTTAGAGATACATATTGTAAAGCCCAGAGCAGCCACTAAAACTTAAAGAGAGATATAGCTAGTAAATCAATAGAGGACACGGAATGAAATATTAAATATTAGTCAACACAAATAAGGCAGCAAAAGAGAAAAACGAGAAAAACTACAGATAAAACAAATATAAAGTAAACACTAATATAATAGCTTTAGATCCAACCATATTGATAAATATATTATATGCCAATGATCTAAAGAAAGACTCCAACTAAATGCAAAGGCACAACCCAATCATATTCTGTCAACAAGAAACACTCTTGAAATACAAAAACATAGATAAGTTAAAAATGATGAAAAACATATTCAATGCAAGCACTAGTCATAAGGAATACTAAATGGCTGTATTATTATCTTATAAATTAGACTTTAGATCAAATAATATTGCTTGTAATTCATTTAGATAATGGCATTTTATAACGATAAAATAGTTTATCAAGGCACATTCTTAAGTATGTGTGCACTTAGAACAATGGTTCAACATTTTTAAAGCAAAAACTGACCAAACTGAAAAAAGACACATCCAAAATGGTGGTTACACACCTGAACTCTTTTCTTGATAGGGATAAAAAAGTAGAAAGAAAATAAGGACAGATGTAGAACATGTGGGCAATGTTATTAACCAACCTGACATAACTGATATTTTTAGAGCTCTTCAAGTGTCCACTAACATTCACCAACATTCACCAAGATAAGTCATGTGCTGGGTCATAAAACTGGAATGAATTAATTTAAAGAGGTCAAAAATATACAGAGTATTACTTCTAGCCACAACAGTATAAAATTAGAAATATGAGAAAAATACATAAACATTTTTAGAAGACCCCAAATATTTGGAAATTCTAAAAAAATCTAAATAATTCTAAATTAGTTCATAACACTAAATGTTTTTGGTAGAAAACAAAGACAGATTTAAAGTCAATAATCTAAGCTTTCACATTAAGAAGCTATAAAAAAGGAAATTCAACCCCAAATAAGTAGAAGGTAAATAATAATTACAAAAATCAATGAAATACAAAATGTTAAACAATAGAGAATAGAAATAAAACAAAAATCTGTCTTTTTAAAAAGATTGGCAGTTGATATTTTTCTTAGGAAACTAAAAAGAGAGAGAGGGAGAGGACAAATAGCAATATTCAGAGTGAAATGCAGATGTAACTACAGATACTATGAATATTAAATTGTACCTGATGAATATTATGAACAATTCTATGTCAATAAATCTAACAATACAGATAAAATGCACATATTCCCTAAATGATATAAGTTATCAAAATGGATATAGGAAGAATAGAAAATATTAATATATCTATTTTTAAAATACAATTTGTGAACATGAGCCTTTCCACAAAGAAAATTTCAGTCCTGAGTATTTTCATTTGTCAATTTTATTAAACACTTTAAAAAGAAATTATATCCATCTTACACAATCTCAGATAACAGGGAAGGAGGAGACATATTTTAGTGGAATTTTTAGGCCAACATTACCCTAACACTTAAACTGAAAATAAATATTATATAAGAAAAGATAACTATAAACTAATACTTTTCATGAAGATAAAAAAGAAAATCCTTCACAAGGTATTAACAAATTAAATCTAACAAAATATAATACATCATGACCAACTGGGTTTTATTTTAGAAATACCAAGTTAATACGACATTTAAAAGTCAAGCAGTGTAATTCACCATACTAACAGAATAAAAGATAAAAATCATATGATTATTTCAAGAAATGAAAAAAAAACTATGAAAAAATTCCCAGCAAAATGCATCTAAAAAACCCTACAGCTATCATTATATATTACGGTTTGTGATTTAATGTTTTCTCTAGAAGAAGAGAAATAAGAAAATGTCCACTATCACTACTTCTATTCAACAACAAATTAGAGGTCCTGGCCATTGTAGTAGTGCGTGTAAGACGAAATAAAAGTTATATAGATTGGAAATAAATAAATAAAATTATCCTTCTTATGGACAACATCACATACATAAAAAGTTTTGTGAATTAAGTAAGGTTATACAACACAATGTCATTATACAAACATCATTTGCCTATTTACATACTAGTAACAAATTTTAGAAAAATGAAATTTAAAATTAAATTTTATAAAAGTTTAATAAAACATAAAATACTTAGGGACAAGTTTGACAAAATATAAATAATACCTGCACACTGAAAGCTATAAAACAGTATTGGGAGAACAAAAAGGAAGATATAAATAAATGAAGAAATATATCTTGCTCATGAATTGGAATACTTT	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6003:HG2_10X_allpass_1650:HG4_PB_HySA_14207:HG2_PB_HySA_17621:HG4_Ill_Krunchall_13882:HG2_Ill_Krunchall_13624:HG4_10X_allpass_1908:HG2_PB_assemblyticsPBcR_26297:HG2_Ill_tnscope_1130:HG4_PB_pbsv_9807:HG4_PB_SVrefine2PBcRDovetail_4897:HG4_Ill_MetaSV_5435:HG2_PB_pbsv_9785:HG2_PB_SVrefine2PBcRplusDovetail_11241:HG2_PB_SVrefine2PB10Xhap12_7114:HG2_Ill_MetaSV_5210:HG2_10X_SVrefine210Xhap12_6995;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6995:HG2_Ill_MetaSV_5210:HG2_PB_SVrefine2PB10Xhap12_7114:HG2_PB_SVrefine2PBcRplusDovetail_11241:HG2_PB_pbsv_9785:HG4_Ill_MetaSV_5435:HG4_PB_SVrefine2PBcRDovetail_4897:HG4_PB_pbsv_9807;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00399772;ClusterMaxSizeDiff=0.00399772;ClusterMaxEditDist=0.00399772;PBcalls=9;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3507;DistBack=23446;DistForward=-3507;DistMin=-3507;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4887;REFWIDENED=8:129757635-129772999;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4074.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:43:1|0:3:26:32:0:./.:0:0:0:0:0/1:50:12:0/1:245:145:.:.:.
chr8	130659482	HG3_Ill_150bpfermikitraw_12527	ACAAAGGGCAAAAGCAGAACCACTGATAAGGGTCCAACAAAGATCACAGGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6998:HG4_PB_HySA_14209:HG2_PB_HySA_17626:HG4_Ill_svaba_12422:HG4_Ill_Krunchall_13887:HG4_Ill_GATKHC_15922:HG4_Ill_GATKHCSBGrefine_6817:HG4_Ill_250bpfermikitraw_13206:HG4_Ill_150bpfermikitraw_12655:HG3_PB_HySA_14665:HG3_Ill_svaba_12443:HG3_Ill_Krunchall_13302:HG3_Ill_GATKHC_15846:HG3_Ill_GATKHCSBGrefine_6580:HG3_Ill_250bpfermikitraw_12913:HG3_Ill_150bpfermikitraw_12527:HG2_Ill_svaba_12329:HG2_Ill_Krunchall_13633:HG2_Ill_GATKHC_15904:HG2_Ill_GATKHCSBGrefine_6694:HG2_Ill_250bpfermikitraw_13310:HG2_Ill_150bpfermikitraw_12490:HG4_Ill_SVrefine2DISCOVARDovetail_7080:HG2_Ill_SVrefine2DISCOVARplusDovetail_13216;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12490:HG2_Ill_250bpfermikitraw_13310:HG2_Ill_GATKHCSBGrefine_6694:HG2_Ill_GATKHC_15904:HG2_Ill_Krunchall_13633:HG2_Ill_svaba_12329:HG3_Ill_150bpfermikitraw_12527:HG3_Ill_250bpfermikitraw_12913:HG3_Ill_GATKHCSBGrefine_6580:HG3_Ill_GATKHC_15846:HG3_Ill_Krunchall_13302:HG3_Ill_svaba_12443:HG3_PB_HySA_14665:HG4_Ill_150bpfermikitraw_12655:HG4_Ill_250bpfermikitraw_13206:HG4_Ill_GATKHCSBGrefine_6817:HG4_Ill_GATKHC_15922:HG4_Ill_Krunchall_13887:HG4_Ill_svaba_12422;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.038835;PBcalls=3;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=71394;DistForward=16479;DistMin=16479;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=39;REFWIDENED=8:130659477-130659565;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4075.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:33:./.:11:28:25:3:./.:0:0:0:0:0/1:31:26:./.:.:.:.:.:.
chr8	131791954	HG2_Ill_svaba_12340	TTTATCCCAAGTGGCCAACTTAATTTTCTTTGTTGCCTCTACCTCTATCTGAAAGCAGATTA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7003:HG2_PB_HySA_17645:HG4_PB_HySA_14220:HG4_PB_pbsv_9815:HG2_PB_pbsv_9794:HG4_Ill_svaba_12432:HG4_Ill_manta_2408:HG4_Ill_SVrefine2DISCOVARDovetail_7088:HG4_Ill_Krunchall_13895:HG4_Ill_GATKHCSBGrefine_6823:HG4_Ill_250bpfermikitraw_13215:HG2_PB_SVrefine2PBcRplusDovetail_11247:HG2_PB_SVrefine2PB10Xhap12_7121:HG2_PB_SVrefine2Falcon1plusDovetail_12042:HG2_Ill_svaba_12340:HG2_Ill_manta_2814:HG2_Ill_SpiralSDKrefine_17343:HG2_Ill_SVrefine2DISCOVARplusDovetail_13223:HG2_Ill_Krunchall_13644:HG2_Ill_GATKHCSBGrefine_6698:HG2_Ill_250bpfermikitraw_13320;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7003:HG4_Ill_svaba_12432:HG4_Ill_manta_2408:HG4_Ill_SVrefine2DISCOVARDovetail_7088:HG4_Ill_Krunchall_13895:HG4_Ill_GATKHCSBGrefine_6823:HG4_Ill_250bpfermikitraw_13215:HG2_PB_SVrefine2PBcRplusDovetail_11247:HG2_PB_SVrefine2PB10Xhap12_7121:HG2_PB_SVrefine2Falcon1plusDovetail_12042:HG2_Ill_svaba_12340:HG2_Ill_manta_2814:HG2_Ill_SpiralSDKrefine_17343:HG2_Ill_SVrefine2DISCOVARplusDovetail_13223:HG2_Ill_Krunchall_13644:HG2_Ill_GATKHCSBGrefine_6698:HG2_Ill_250bpfermikitraw_13320;NumExactMatchSVs=17;ClusterMaxShiftDist=0.048;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.048;PBcalls=7;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-61;DistBack=7134;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=63;REFWIDENED=8:131791955-131792078;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4076.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:26:0|1:26:1:2:25:./.:0:0:0:0:0/1:24:15:./.:.:.:.:.:.
chr8	132168283	HG2_Ill_GATKHCSBGrefine_6700	TCTTCCCTTCTTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGCGCAGTGGCATGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACGACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_700:HG2_PB_HySA_17648:HG3_PB_assemblyticsfalcon_26964:HG4_PB_assemblyticsfalcon_26467:HG4_Ill_Krunchall_13897:HG3_Ill_Krunchall_13315:HG2_Ill_Krunchall_13647:HG3_PB_HySA_14676:HG2_PB_PB10Xdip_29396:HG4_PB_pbsv_9817:HG3_Ill_MetaSV_5385:HG2_Ill_tnscope_1131:HG4_PB_SVrefine2Falcon1Dovetail_6010:HG4_Ill_MetaSV_5441:HG4_Ill_GATKHCSBGrefine_6825:HG4_10X_allpass_1909:HG3_PB_pbsv_9538:HG3_PB_SVrefine2PBcRDovetail_4478:HG3_PB_SVrefine2Falcon1Dovetail_5986:HG3_Ill_scalpel_9500:HG3_Ill_manta_2298:HG3_Ill_SVrefine2DISCOVARDovetail_7334:HG3_Ill_GATKHCSBGrefine_6587:HG3_10X_allpass_1983:HG2_PB_pbsv_9797:HG2_PB_SVrefine2PB10Xhap12_7123:HG2_PB_SVrefine2Falcon2Bionano_4586:HG2_Ill_manta_2815:HG2_Ill_breakscan11_1423:HG2_Ill_MetaSV_5215:HG2_Ill_GATKHCSBGrefine_6700:HG2_10X_allpass_1651:HG2_10X_SVrefine210Xhap12_7004:HG4_Ill_Spiral_813:HG3_Ill_Spiral_10387;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7004:HG2_10X_allpass_1651:HG2_Ill_GATKHCSBGrefine_6700:HG2_Ill_MetaSV_5215:HG2_Ill_breakscan11_1423:HG2_Ill_manta_2815:HG2_PB_PB10Xdip_29396:HG4_PB_SVrefine2Falcon1Dovetail_6010:HG4_Ill_MetaSV_5441:HG4_Ill_GATKHCSBGrefine_6825:HG4_10X_allpass_1909:HG3_PB_pbsv_9538:HG3_PB_SVrefine2PBcRDovetail_4478:HG3_PB_SVrefine2Falcon1Dovetail_5986:HG3_Ill_scalpel_9500:HG3_Ill_manta_2298:HG3_Ill_SVrefine2DISCOVARDovetail_7334:HG3_Ill_GATKHCSBGrefine_6587:HG3_10X_allpass_1983:HG2_PB_pbsv_9797:HG2_PB_SVrefine2PB10Xhap12_7123:HG2_PB_SVrefine2Falcon2Bionano_4586;NumExactMatchSVs=22;ClusterMaxShiftDist=0.12987;ClusterMaxSizeDiff=0.12987;ClusterMaxEditDist=0.12987;PBcalls=13;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=21158;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=8:132168284-132168614;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4077.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:0|1:20:1:1:25:./.:0:0:0:0:0/1:27:20:0/1:20:6:.:.:.
chr8	132277622	HG4_PB_SVrefine2Falcon1Dovetail_6012	TCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAATCAATGGCAACAAAAGCCAAAATTGGCAAATAGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCTCAATCTGCTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAGCCCATGAAAAAGGGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGAAGCCAAAAGACACATGAAAAAATGATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATCCCATCTCACACCAGTTAGAATGGTGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTGTTATACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGGTTTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGATATATATCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACATGTATGTTTATTGCAGCACTATTCACAATAACAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATAGGAAATCATCATTCTCAGTAAACAATCGCAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAAGAATGAGAAAACATGGACACAGGAAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGTGGGGGGAGGGATAGCATTAGGAGATATACCTAATGCTAAATGAGGAGTTAATGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGTACATTGTGCACACATACCCTAAAACCTAAAGTATAATAATAATAAAAAAAAGACAGAAGAATCAAATAGATGCAATAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACAAAAATAAAATAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATACAACCTCCCAAGACTAAACCAGGAAGAATTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGAGGCAATAATCAATAGCTTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAGAAGAAGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACGAAAGCCTGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTCATGAACGTTGATGCAAAAATCCTCAATAAAATACTGGCAAACCAAATCCAGCAGTACATCAAAAAGCTTGTCCACCATGATCAAGTGGTCTTCCTCCCTGGGATGCAAGGCTGGTTCAAGATACACAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTATGTATTGATGGGACATATCACAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAAACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGCCCAGGGCAATTAGGCAGGAGCAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATACCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCACTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCATGCTACCTGTCTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACCATCTGATCTTTGACAAACCTGAGAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGACCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGACTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7006:HG2_Ill_SpiralSDKrefine_17347:HG2_10X_allpass_1652:HG3_10X_allpass_1984:HG4_10X_allpass_1910:HG2_PB_pbsv_9800:HG3_PB_pbsv_9541:HG4_Ill_MetaSV_5443:HG3_Ill_MetaSV_5386:HG3_Ill_GATKHCSBGrefine_6591:HG2_PB_HySA_17655:HG2_Ill_MetaSV_5217:HG3_PB_HySA_14682:HG4_PB_pbsv_9820:HG4_PB_SVrefine2Falcon1Dovetail_6012:HG3_PB_SVrefine2PBcRDovetail_4480:HG3_PB_SVrefine2Falcon1Dovetail_5987:HG2_PB_SVrefine2PB10Xhap12_7125:HG2_PB_SVrefine2Falcon2Bionano_4588:HG2_PB_SVrefine2Falcon1plusDovetail_12044;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7006:HG4_PB_SVrefine2Falcon1Dovetail_6012:HG3_PB_SVrefine2PBcRDovetail_4480:HG3_PB_SVrefine2Falcon1Dovetail_5987:HG2_PB_SVrefine2PB10Xhap12_7125:HG2_PB_SVrefine2Falcon2Bionano_4588:HG2_PB_SVrefine2Falcon1plusDovetail_12044;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0543613;ClusterMaxSizeDiff=0.0543613;ClusterMaxEditDist=0.0611121;PBcalls=11;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-2881;DistBack=34370;DistForward=-2834;DistMin=-2834;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1103;REFWIDENED=8:132277623-132281606;PctSeqSimilarity=0.9878;PctSizeSimilarity=1;PctRecOverlap=0.9892;SizeDiff=0;StartDistance=-31;EndDistance=-31;GTMatch=0;TruScore=99;MatchId=4078.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:0|1:25:1:1:20:./.:0:0:0:0:0/1:64:20:0/1:213:97:2904:.:.
chr8	135082913	HG3_PB_SVrefine2PBcRDovetail_4488	ACATTCTTCAACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCAGCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCAAGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAAATGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGTGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATGCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATACTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCGATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCAGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTTGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCTGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATGGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7018:HG2_10X_allpass_1654:HG3_10X_allpass_1987:HG4_PB_assemblyticsfalcon_26504:HG4_10X_allpass_1912:HG3_PB_assemblyticsfalcon_26996:HG2_PB_assemblyticsfalcon_27103:HG4_Ill_Krunchall_13927:HG3_Ill_Krunchall_13351:HG2_Ill_Krunchall_13683:HG3_Ill_MetaSV_5392:HG2_Ill_tnscope_1132:HG4_PB_pbsv_9834:HG4_PB_SVrefine2PBcRDovetail_4912:HG4_PB_SVrefine2Falcon1Dovetail_6023:HG4_Ill_SVrefine2DISCOVARDovetail_7106:HG4_Ill_MetaSV_5450:HG3_PB_pbsv_9555:HG3_PB_SVrefine2PBcRDovetail_4488:HG3_PB_SVrefine2Falcon1Dovetail_6000:HG2_PB_pbsv_9812:HG2_PB_SVrefine2PBcRplusDovetail_11262:HG2_PB_SVrefine2PB10Xhap12_7137:HG2_PB_SVrefine2Falcon2Bionano_4598:HG2_PB_SVrefine2Falcon1plusDovetail_12052:HG2_Ill_SVrefine2DISCOVARplusDovetail_13240:HG2_Ill_MetaSV_5221;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7018:HG4_PB_pbsv_9834:HG4_PB_SVrefine2PBcRDovetail_4912:HG4_PB_SVrefine2Falcon1Dovetail_6023:HG4_Ill_SVrefine2DISCOVARDovetail_7106:HG4_Ill_MetaSV_5450:HG3_PB_pbsv_9555:HG3_PB_SVrefine2PBcRDovetail_4488:HG3_PB_SVrefine2Falcon1Dovetail_6000:HG2_PB_pbsv_9812:HG2_PB_SVrefine2PBcRplusDovetail_11262:HG2_PB_SVrefine2PB10Xhap12_7137:HG2_PB_SVrefine2Falcon2Bionano_4598:HG2_PB_SVrefine2Falcon1plusDovetail_12052:HG2_Ill_SVrefine2DISCOVARplusDovetail_13240:HG2_Ill_MetaSV_5221;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00508572;ClusterMaxSizeDiff=0.00508572;ClusterMaxEditDist=0.00508572;PBcalls=14;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6102;DistBack=-6103;DistForward=-6084;DistMin=-6103;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=8:135082914-135089031;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4079.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:98:./.:7:8:0:30:./.:0:0:0:0:1/1:0:32:1/1:1:469:6149:.:.
chr8	135231730	HG2_Ill_SpiralSDKrefine_17375	GAAATGGAAACCTAGATGAAATGGACAAACTCCTGGAAACATACAATCCTCCTAGCTTGAATC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7019:HG3_PB_HySA_14709:HG2_PB_pbsv_9813:HG3_PB_pbsv_9556:HG2_PB_HySA_17693:HG3_PB_SVrefine2PBcRDovetail_4489:HG3_PB_SVrefine2Falcon1Dovetail_6001:HG3_Ill_svaba_12493:HG3_Ill_scalpel_9533:HG3_Ill_manta_2302:HG3_Ill_SVrefine2DISCOVARDovetail_7349:HG3_Ill_Krunchall_13353:HG3_Ill_GATKHCSBGrefine_6609:HG3_Ill_250bpfermikitraw_12969:HG3_Ill_150bpfermikitraw_12575:HG2_PB_SVrefine2Falcon1plusDovetail_12053:HG2_Ill_svaba_12372:HG2_Ill_manta_2819:HG2_Ill_SpiralSDKrefine_17375:HG2_Ill_GATKHCSBGrefine_6712:HG2_Ill_250bpfermikitraw_13358:HG2_Ill_150bpfermikitraw_12536;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7019:HG3_PB_SVrefine2PBcRDovetail_4489:HG3_PB_SVrefine2Falcon1Dovetail_6001:HG3_Ill_svaba_12493:HG3_Ill_scalpel_9533:HG3_Ill_manta_2302:HG3_Ill_SVrefine2DISCOVARDovetail_7349:HG3_Ill_Krunchall_13353:HG3_Ill_GATKHCSBGrefine_6609:HG3_Ill_250bpfermikitraw_12969:HG3_Ill_150bpfermikitraw_12575:HG2_PB_SVrefine2Falcon1plusDovetail_12053:HG2_Ill_svaba_12372:HG2_Ill_manta_2819:HG2_Ill_SpiralSDKrefine_17375:HG2_Ill_GATKHCSBGrefine_6712:HG2_Ill_250bpfermikitraw_13358:HG2_Ill_150bpfermikitraw_12536;NumExactMatchSVs=18;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.0322581;PBcalls=7;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=70529;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=63;REFWIDENED=8:135231731-135231855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4080.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:1|0:3:27:26:4:./.:0:0:0:0:0/1:29:23:./.:.:.:.:.:.
chr8	137716813	HG4_Ill_GATKHCSBGrefine_6845	TAGAAATGAATAATTCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1426:HG3_PB_HySA_14736:HG4_Ill_Krunchall_13948:HG3_Ill_Krunchall_13380:HG2_Ill_Krunchall_13710:HG2_PB_assemblyticsfalcon_27132:HG2_PB_assemblyticsPBcR_26382:HG4_PB_assemblyticsfalcon_26538:HG3_PB_assemblyticsfalcon_27031:HG4_Ill_Spiral_816:HG3_Ill_Spiral_10441:HG2_PB_HySA_17729:HG2_Ill_Spiral_703:HG4_PB_pbsv_9849:HG4_PB_HySA_14292:HG4_Ill_MetaSV_5453:HG2_Ill_tnscope_1133:HG2_Ill_MetaSV_5223:HG4_PB_SVrefine2PBcRDovetail_4924:HG4_PB_SVrefine2Falcon1Dovetail_6035:HG4_Ill_scalpel_9188:HG4_Ill_manta_2413:HG4_Ill_SVrefine2DISCOVARDovetail_7113:HG4_Ill_GATKHCSBGrefine_6845:HG4_10X_allpass_1914:HG3_PB_pbsv_9569:HG3_PB_SVrefine2PBcRDovetail_4498:HG3_PB_SVrefine2Falcon1Dovetail_6009:HG3_Ill_GATKHCSBGrefine_6617:HG3_10X_allpass_1988:HG2_PB_pbsv_9828:HG2_PB_SVrefine2PBcRplusDovetail_11271:HG2_PB_SVrefine2PB10Xhap12_7147:HG2_PB_SVrefine2Falcon2Bionano_4609:HG2_PB_SVrefine2Falcon1plusDovetail_12063:HG2_Ill_scalpel_9445:HG2_Ill_manta_2822:HG2_Ill_SVrefine2DISCOVARplusDovetail_13247:HG2_Ill_GATKHCSBGrefine_6722:HG2_10X_allpass_1656:HG2_10X_SVrefine210Xhap12_7030;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7030:HG2_10X_allpass_1656:HG2_Ill_GATKHCSBGrefine_6722:HG2_Ill_SVrefine2DISCOVARplusDovetail_13247:HG2_Ill_manta_2822:HG2_Ill_scalpel_9445:HG2_PB_SVrefine2Falcon1plusDovetail_12063:HG2_PB_SVrefine2Falcon2Bionano_4609:HG2_PB_SVrefine2PB10Xhap12_7147:HG2_PB_SVrefine2PBcRplusDovetail_11271:HG2_PB_pbsv_9828:HG3_10X_allpass_1988:HG3_Ill_GATKHCSBGrefine_6617:HG3_PB_SVrefine2Falcon1Dovetail_6009:HG3_PB_SVrefine2PBcRDovetail_4498:HG3_PB_pbsv_9569:HG4_10X_allpass_1914:HG4_Ill_GATKHCSBGrefine_6845:HG4_Ill_SVrefine2DISCOVARDovetail_7113:HG4_Ill_manta_2413:HG4_Ill_scalpel_9188:HG4_PB_SVrefine2Falcon1Dovetail_6035:HG4_PB_SVrefine2PBcRDovetail_4924;NumExactMatchSVs=23;ClusterMaxShiftDist=0.096875;ClusterMaxSizeDiff=0.096875;ClusterMaxEditDist=0.0970266;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=10433;DistForward=-327;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=8:137716814-137717155;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4081.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:5:39:0:25:./.:0:0:0:0:1/1:0:55:./.:1:12:.:.:.
chr8	138074855	HG2_Ill_svaba_12389	ATACATATATACAGTGTATGTGTATATACATATATACAGTGTATGTGTATATACATATATACAGTGTATGTGTATATACATATATACAGTGTATGTGTATATACATATATACAGTGTATGTGTATATACATATATACAGTGTATGTGTATATACATATATACAGTGTATGTGTATATACATATATACAGTGTATGTGTATT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_9830:HG4_Ill_svaba_12481:HG2_10X_SVrefine210Xhap12_7033:HG4_Ill_250bpfermikitraw_13279:HG4_Ill_150bpfermikitraw_12724:HG2_Ill_svaba_12389:HG2_10X_SVrefine210Xhap12_7032:HG4_PB_SVrefine2PBcRDovetail_4925:HG4_PB_SVrefine2Falcon1Dovetail_6037:HG4_Ill_SVrefine2DISCOVARDovetail_7115:HG2_PB_SVrefine2Falcon2Bionano_4611:HG4_PB_pbsv_9851;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_svaba_12389:HG4_Ill_150bpfermikitraw_12724:HG4_Ill_250bpfermikitraw_13279:HG4_Ill_svaba_12481;NumExactMatchSVs=4;ClusterMaxShiftDist=0.178313;ClusterMaxSizeDiff=0.178313;ClusterMaxEditDist=0.222222;PBcalls=5;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-200;DistBack=-99;DistForward=-48;DistMin=-99;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=283;REFWIDENED=8:138074747-138075229;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4082.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:38:0|1:37:7:5:28:./.:0:0:0:0:0/1:15:11:./.:.:.:.:.:.
chr8	138200162	HG3_PB_pbsv_9577	TGGAAAGGAGGTTATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATC	T	20	PASS	ClusterIDs=HG4_PB_HySA_14302:HG3_Ill_GATKHCSBGrefine_6623:HG3_Ill_manta_2307:HG2_PB_assemblyticsPBcR_26387:HG4_PB_assemblyticsfalcon_26548:HG3_Ill_MetaSV_5399:HG3_Ill_Spiral_10445:HG4_Ill_Krunchall_13953:HG2_Ill_Krunchall_13718:HG2_PB_pbsv_9832:HG2_Ill_breakscan11_1427:HG4_PB_pbsv_9853:HG4_Ill_MetaSV_5454:HG4_PB_SVrefine2Falcon1Dovetail_6039:HG4_Ill_scalpel_9193:HG4_Ill_manta_2414:HG4_Ill_SVrefine2DISCOVARDovetail_7116:HG4_Ill_GATKHCSBGrefine_6849:HG4_10X_allpass_1916:HG3_PB_pbsv_9577:HG3_PB_SVrefine2PBcRDovetail_4502:HG3_Ill_scalpel_9562:HG3_Ill_SVrefine2DISCOVARDovetail_7361:HG3_Ill_MetaSV_5398:HG3_10X_allpass_1991:HG2_PB_SVrefine2PBcRplusDovetail_11273:HG2_PB_SVrefine2PB10Xhap12_7150:HG2_PB_SVrefine2Falcon2Bionano_4612:HG2_Ill_manta_2823:HG2_Ill_SpiralSDKrefine_17396:HG2_Ill_MetaSV_5224:HG2_Ill_GATKHCSBGrefine_6725:HG2_10X_allpass_1657:HG2_10X_SVrefine210Xhap12_7034;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7034:HG2_10X_allpass_1657:HG2_Ill_GATKHCSBGrefine_6725:HG2_Ill_MetaSV_5224:HG2_Ill_SpiralSDKrefine_17396:HG2_Ill_manta_2823:HG2_PB_SVrefine2Falcon2Bionano_4612:HG2_PB_SVrefine2PB10Xhap12_7150:HG2_PB_SVrefine2PBcRplusDovetail_11273:HG3_10X_allpass_1991:HG3_Ill_MetaSV_5398:HG3_Ill_SVrefine2DISCOVARDovetail_7361:HG3_Ill_scalpel_9562:HG3_PB_SVrefine2PBcRDovetail_4502:HG3_PB_pbsv_9577:HG4_10X_allpass_1916:HG4_Ill_GATKHCSBGrefine_6849:HG4_Ill_SVrefine2DISCOVARDovetail_7116:HG4_Ill_manta_2414:HG4_Ill_scalpel_9193:HG4_PB_SVrefine2Falcon1Dovetail_6039;NumExactMatchSVs=21;ClusterMaxShiftDist=0.128755;ClusterMaxSizeDiff=0.128755;ClusterMaxEditDist=0.128755;PBcalls=11;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-245;DistBack=49870;DistForward=-237;DistMin=-237;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=8:138200163-138200422;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4083.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:30:0|1:41:1:1:31:./.:0:0:0:0:0/1:35:13:./.:.:.:.:.:.
chr8	138742965	HG4_Ill_manta_2416	GAAACATGATTCCCAGTGTTGGAGGTGGGGCCTGGTGGGTGGTGATTAGACCATGTGGACAAATTCTTCATGAATGATTTAGCACCCTTGGTGTTAAGGGCATTCTCACTGGCTTAGTTCCCATGAGCTCTGGTTGTTGAAAGAGTCTGGGACCTCCTCCTTCTCCCTCTCTTGTTCCTGCTCTAGCCATTTGGTGCTCCTGCTCCCCCTTCACCTTCTGCCATGAGTGAAAGCTTCCTGAGGCTTCACCAGAAGCAGACATGGGTACCAAGCTTCCTATACAACCTGCAGAACTGTGAGCTGAAAAACCTCTTTTTAAAGTAAACTACCCGGCCTCAGGTATTTCTTTATATAAATGCAAGAACAGACTAATACTCTAGGTATAAGAAGATTTATTTCTTTCTAGCTGTGAAATTTAAATGCTAGGAGTTGGAGGTGGCCAAATCCCCACCAAGTGAAGGAAACAGAAGTTAAAGCCAGTGAATGGTATGATGCAAAGATGAAAGATGGCGAAATTATTACGGTAATAGGGAGTCACTTAATAAAATTGTTTGTATCTATATTATTTCCCCTTCACATTTCCATGAGCTAATACATTTTTATTGTACCTAAGAAATTTTGAGATGTGTTTTTTAATCAACCTTAGACAATGTGTCCTGTTAAATATTTTTGCTAAACAAATAACTTCCATGGCTACAACATTAAGAATACATGGATAGTGCTAAAATTTTCTATACTATTTACCTAATAATTATACCATAATCAGTTGCTATTCATTCAGCGCCTCTATCATTCAAGTTATTTTCTGTTATCCACTTTATTTCTCACAAAAACATCTTCAAATGGGGCATAATTTTCTTTAGTATTTAGATTATGGAACTAAAGATTACAGAAAAC	G	20	PASS	ClusterIDs=HG3_PB_pbsv_9584:HG3_PB_SVrefine2Falcon1Dovetail_6018:HG3_PB_assemblyticsfalcon_27053:HG2_PB_assemblyticsfalcon_27148:HG2_PB_assemblyticsPBcR_26401:HG4_PB_assemblyticsfalcon_26562:HG4_Ill_Krunchall_13962:HG2_Ill_Krunchall_13728:HG4_Ill_Spiral_817:HG2_Ill_tnscope_1134:HG4_PB_SVrefine2PBcRDovetail_4930:HG4_PB_SVrefine2Falcon1Dovetail_6045:HG4_Ill_manta_2416:HG4_Ill_SVrefine2DISCOVARDovetail_7121:HG4_Ill_GATKHCSBGrefine_6861:HG3_Ill_manta_2310:HG3_Ill_MetaSV_5402:HG3_Ill_GATKHCSBGrefine_6634:HG3_10X_allpass_1992:HG2_PB_pbsv_9840:HG2_PB_SVrefine2PBcRplusDovetail_11278:HG2_PB_SVrefine2PB10Xhap12_7157:HG2_PB_SVrefine2Falcon2Bionano_4617:HG2_PB_SVrefine2Falcon1plusDovetail_12069:HG2_Ill_manta_2827:HG2_Ill_SpiralSDKrefine_17404:HG2_Ill_SVrefine2DISCOVARplusDovetail_13252:HG2_Ill_MetaSV_5227:HG2_Ill_GATKHCSBGrefine_6735:HG2_10X_allpass_1658:HG2_10X_SVrefine210Xhap12_7040:HG2_Ill_breakscan11_1428:HG4_10X_allpass_1917:HG4_Ill_MetaSV_5458:HG4_PB_pbsv_9860;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7040:HG2_10X_allpass_1658:HG2_Ill_GATKHCSBGrefine_6735:HG2_Ill_MetaSV_5227:HG2_Ill_SVrefine2DISCOVARplusDovetail_13252:HG2_Ill_SpiralSDKrefine_17404:HG2_Ill_manta_2827:HG2_PB_SVrefine2Falcon1plusDovetail_12069:HG2_PB_SVrefine2Falcon2Bionano_4617:HG2_PB_SVrefine2PB10Xhap12_7157:HG2_PB_SVrefine2PBcRplusDovetail_11278:HG2_PB_pbsv_9840:HG3_10X_allpass_1992:HG3_Ill_GATKHCSBGrefine_6634:HG3_Ill_MetaSV_5402:HG3_Ill_manta_2310:HG4_Ill_GATKHCSBGrefine_6861:HG4_Ill_SVrefine2DISCOVARDovetail_7121:HG4_Ill_manta_2416:HG4_PB_SVrefine2Falcon1Dovetail_6045:HG4_PB_SVrefine2PBcRDovetail_4930;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00558347;ClusterMaxSizeDiff=0.00558347;ClusterMaxEditDist=0.0133705;PBcalls=14;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-896;DistBack=6576;DistForward=-895;DistMin=-895;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=8:138742966-138743863;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4084.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:67:1/1:6:19:0:15:./.:0:0:0:0:1/1:0:28:1/1:2:49:.:.:.
chr8	138860548	HG3_PB_SVrefine2Falcon1Dovetail_6019	TAAAGAGAAGGATAGGCCGGGCGCGATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCAGGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1135:HG4_PB_HySA_14318:HG3_PB_HySA_14759:HG3_Ill_MetaSV_5403:HG2_PB_HySA_17753:HG4_PB_pbsv_9861:HG4_PB_SVrefine2PBcRDovetail_4931:HG4_PB_SVrefine2Falcon1Dovetail_6046:HG4_Ill_scalpel_9199:HG4_Ill_manta_2417:HG4_Ill_SVrefine2DISCOVARDovetail_7122:HG4_Ill_GATKHCSBGrefine_6862:HG4_10X_allpass_1918:HG3_PB_SVrefine2Falcon1Dovetail_6019:HG3_Ill_manta_2311:HG3_Ill_GATKHCSBGrefine_6635:HG3_10X_allpass_1993:HG2_PB_pbsv_9841:HG2_PB_SVrefine2PBcRplusDovetail_11280:HG2_PB_SVrefine2PB10Xhap12_7158:HG2_PB_SVrefine2Falcon2Bionano_4618:HG2_PB_SVrefine2Falcon1plusDovetail_12070:HG2_Ill_scalpel_9457:HG2_Ill_manta_2828:HG2_Ill_SVrefine2DISCOVARplusDovetail_13253:HG2_Ill_GATKHCSBGrefine_6736:HG2_10X_SVrefine210Xhap12_7041:HG3_PB_pbsv_9585:HG2_Ill_breakscan11_1429;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7041:HG2_Ill_GATKHCSBGrefine_6736:HG2_Ill_SVrefine2DISCOVARplusDovetail_13253:HG2_Ill_manta_2828:HG2_Ill_scalpel_9457:HG2_PB_SVrefine2Falcon1plusDovetail_12070:HG2_PB_SVrefine2Falcon2Bionano_4618:HG2_PB_SVrefine2PB10Xhap12_7158:HG2_PB_SVrefine2PBcRplusDovetail_11280:HG2_PB_pbsv_9841:HG3_10X_allpass_1993:HG3_Ill_GATKHCSBGrefine_6635:HG3_Ill_manta_2311:HG3_PB_SVrefine2Falcon1Dovetail_6019:HG4_10X_allpass_1918:HG4_Ill_GATKHCSBGrefine_6862:HG4_Ill_SVrefine2DISCOVARDovetail_7122:HG4_Ill_manta_2417:HG4_Ill_scalpel_9199:HG4_PB_SVrefine2Falcon1Dovetail_6046:HG4_PB_SVrefine2PBcRDovetail_4931:HG4_PB_pbsv_9861;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.021309;PBcalls=13;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=-325;DistForward=-22;DistMin=-325;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=314;REFWIDENED=8:138860549-138861186;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4085.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:./.:12:26:1:30:./.:0:0:0:0:1/1:0:38:0/1:1:8:.:.:.
chr8	140014070	HG2_PB_assemblyticsfalcon_27169	CCAGGCTGGGCTGCATCCTGCCCTGTGCTTTCACCTGTCACAGGCTGTGCTGCATCCTGCCCTGTGCATTCATCTGTCACAGGCTAGGCTGTGCCCTACCCTGTGCATTCATTTGTCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7046:HG4_PB_HySA_14337:HG2_PB_pbsv_9851:HG4_Ill_svaba_12502:HG4_Ill_scalpel_9205:HG4_Ill_MetaSV_5463:HG4_Ill_GATKHC_16042:HG4_Ill_GATKHCSBGrefine_6866:HG4_Ill_250bpfermikitraw_13305:HG4_Ill_150bpfermikitraw_12752:HG4_10X_allpass_1920:HG2_PB_assemblyticsfalcon_27169:HG2_PB_SVrefine2Falcon1plusDovetail_12079:HG2_Ill_svaba_12414:HG2_Ill_SpiralSDKrefine_17417:HG2_Ill_MetaSV_5233:HG2_Ill_GATKHC_16027:HG2_Ill_GATKHCSBGrefine_6741:HG4_PB_pbsv_9871:HG4_PB_SVrefine2PBcRDovetail_4938:HG4_PB_SVrefine2Falcon1Dovetail_6055:HG4_Ill_SVrefine2DISCOVARDovetail_7131:HG2_PB_SVrefine2PBcRplusDovetail_11288:HG2_PB_SVrefine2PB10Xhap12_7166;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6741:HG2_Ill_GATKHC_16027:HG2_Ill_MetaSV_5233:HG2_Ill_SpiralSDKrefine_17417:HG2_Ill_svaba_12414:HG2_PB_SVrefine2Falcon1plusDovetail_12079:HG2_PB_assemblyticsfalcon_27169:HG4_10X_allpass_1920:HG4_Ill_150bpfermikitraw_12752:HG4_Ill_250bpfermikitraw_13305:HG4_Ill_GATKHCSBGrefine_6866:HG4_Ill_GATKHC_16042:HG4_Ill_MetaSV_5463:HG4_Ill_scalpel_9205:HG4_Ill_svaba_12502;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0169492;ClusterMaxSizeDiff=0.0169492;ClusterMaxEditDist=0.025641;PBcalls=9;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-117;DistBack=28535;DistForward=-76;DistMin=-76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=51;REFWIDENED=8:140014066-140014233;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4087.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:53:./.:12:35:20:6:./.:0:0:0:0:0/1:32:19:./.:.:.:.:.:.
chr8	140422194	HG2_PB_SVrefine2PB10Xhap12_7172	GTTTATTGATCTTTTCCTTCATAATCTGTATTTGTTTATTGTCTTGTTTAAGACTTTTTTCTTATCTATAGAGTTACAAATATATTTTCCTAAATGTTATTCTAGAAGTTTTTTTGACTTTTTATTTGGGTCTTTCACATACTTGTAATTAATTTC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7172:HG3_PB_pbsv_9599:HG2_PB_pbsv_9858:HG3_Ill_MetaSV_5409:HG2_PB_SVrefine2PBcRplusDovetail_11293;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7172:HG2_PB_SVrefine2PBcRplusDovetail_11293;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0192926;ClusterMaxSizeDiff=0.0192926;ClusterMaxEditDist=0.038835;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-155;DistBack=64573;DistForward=-156;DistMin=-156;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=313;REFWIDENED=8:140422195-140422662;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4088.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:33:6:3:24:./.:0:0:0:0:0/1:38:8:./.:.:.:.:.:.
chr8	140475258	HG2_PB_SVrefine2Falcon2Bionano_4632	CAAGAAAACCATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTAAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7051:HG4_10X_allpass_1921:HG4_Ill_Krunchall_13974:HG3_Ill_Krunchall_13422:HG2_Ill_Krunchall_13749:HG4_PB_assemblyticsfalcon_26590:HG3_PB_assemblyticsfalcon_27083:HG2_PB_assemblyticsfalcon_27178:HG2_PB_assemblyticsPBcR_26435:HG2_PB_HySA_17784:HG3_PB_HySA_14784:HG4_PB_HySA_14343:HG4_Ill_MetaSV_5465:HG3_Ill_MetaSV_5410:HG2_Ill_tnscope_1136:HG4_PB_pbsv_9875:HG4_PB_SVrefine2PBcRDovetail_4942:HG4_PB_SVrefine2Falcon1Dovetail_6059:HG4_Ill_scalpel_9206:HG4_Ill_GATKHCSBGrefine_6868:HG3_PB_pbsv_9600:HG3_PB_SVrefine2PBcRDovetail_4516:HG3_PB_SVrefine2Falcon1Dovetail_6032:HG3_Ill_scalpel_9585:HG3_Ill_GATKHCSBGrefine_6643:HG3_10X_allpass_1995:HG2_PB_pbsv_9859:HG2_PB_SVrefine2PBcRplusDovetail_11294:HG2_PB_SVrefine2PB10Xhap12_7173:HG2_PB_SVrefine2Falcon2Bionano_4632:HG2_PB_SVrefine2Falcon1plusDovetail_12084:HG2_Ill_scalpel_9466:HG2_Ill_manta_2831:HG2_Ill_GATKHCSBGrefine_6743:HG2_10X_allpass_1659;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7051:HG4_PB_pbsv_9875:HG4_PB_SVrefine2PBcRDovetail_4942:HG4_PB_SVrefine2Falcon1Dovetail_6059:HG4_Ill_scalpel_9206:HG4_Ill_GATKHCSBGrefine_6868:HG3_PB_pbsv_9600:HG3_PB_SVrefine2PBcRDovetail_4516:HG3_PB_SVrefine2Falcon1Dovetail_6032:HG3_Ill_scalpel_9585:HG3_Ill_GATKHCSBGrefine_6643:HG3_10X_allpass_1995:HG2_PB_pbsv_9859:HG2_PB_SVrefine2PBcRplusDovetail_11294:HG2_PB_SVrefine2PB10Xhap12_7173:HG2_PB_SVrefine2Falcon2Bionano_4632:HG2_PB_SVrefine2Falcon1plusDovetail_12084:HG2_Ill_scalpel_9466:HG2_Ill_manta_2831:HG2_Ill_GATKHCSBGrefine_6743:HG2_10X_allpass_1659;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0640244;ClusterMaxSizeDiff=0.0640244;ClusterMaxEditDist=0.0640244;PBcalls=18;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=-333;DistForward=29871;DistMin=-333;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=8:140475259-140475601;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4089.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:0:29:2:25:./.:0:0:0:0:1/1:0:40:./.:2:13:.:.:.
chr8	140975832	HG2_Ill_SpiralSDKrefine_17432	AGTGCAAGGGGAAATACAAACAATGCAATTACTTTTAAAAAGCAGAGACGCATCACACGGGGGAGAGAAGGCTCCATGTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7056:HG3_PB_pbsv_9604:HG4_PB_pbsv_9885:HG2_PB_pbsv_9866:HG4_PB_SVrefine2PBcRDovetail_4946:HG4_PB_SVrefine2Falcon1Dovetail_6065:HG4_Ill_svaba_12513:HG4_Ill_scalpel_9213:HG4_Ill_SVrefine2DISCOVARDovetail_7139:HG4_Ill_GATKHCSBGrefine_6873:HG4_Ill_250bpfermikitraw_13316:HG4_Ill_150bpfermikitraw_12764:HG3_PB_SVrefine2PBcRDovetail_4521:HG3_PB_SVrefine2Falcon1Dovetail_6039:HG3_Ill_svaba_12557:HG3_Ill_scalpel_9593:HG3_Ill_SVrefine2DISCOVARDovetail_7376:HG3_Ill_GATKHCSBGrefine_6646:HG3_Ill_250bpfermikitraw_13040:HG3_Ill_150bpfermikitraw_12642:HG3_10X_allpass_1996:HG2_PB_SVrefine2PBcRplusDovetail_11299:HG2_PB_SVrefine2PB10Xhap12_7180:HG2_PB_SVrefine2Falcon1plusDovetail_12089:HG2_Ill_svaba_12431:HG2_Ill_scalpel_9474:HG2_Ill_manta_2835:HG2_Ill_SpiralSDKrefine_17432:HG2_Ill_SVrefine2DISCOVARplusDovetail_13265:HG2_Ill_GATKHCSBGrefine_6745:HG2_Ill_250bpfermikitraw_13436:HG2_Ill_150bpfermikitraw_12612;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7056:HG4_PB_SVrefine2PBcRDovetail_4946:HG4_PB_SVrefine2Falcon1Dovetail_6065:HG4_Ill_svaba_12513:HG4_Ill_scalpel_9213:HG4_Ill_SVrefine2DISCOVARDovetail_7139:HG4_Ill_GATKHCSBGrefine_6873:HG4_Ill_250bpfermikitraw_13316:HG4_Ill_150bpfermikitraw_12764:HG3_PB_SVrefine2PBcRDovetail_4521:HG3_PB_SVrefine2Falcon1Dovetail_6039:HG3_Ill_svaba_12557:HG3_Ill_scalpel_9593:HG3_Ill_SVrefine2DISCOVARDovetail_7376:HG3_Ill_GATKHCSBGrefine_6646:HG3_Ill_250bpfermikitraw_13040:HG3_Ill_150bpfermikitraw_12642:HG3_10X_allpass_1996:HG2_PB_SVrefine2PBcRplusDovetail_11299:HG2_PB_SVrefine2PB10Xhap12_7180:HG2_PB_SVrefine2Falcon1plusDovetail_12089:HG2_Ill_svaba_12431:HG2_Ill_scalpel_9474:HG2_Ill_manta_2835:HG2_Ill_SpiralSDKrefine_17432:HG2_Ill_SVrefine2DISCOVARplusDovetail_13265:HG2_Ill_GATKHCSBGrefine_6745:HG2_Ill_250bpfermikitraw_13436:HG2_Ill_150bpfermikitraw_12612;NumExactMatchSVs=29;ClusterMaxShiftDist=0.025641;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.0512821;PBcalls=10;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=20;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-79;DistBack=2789;DistForward=6040;DistMin=2789;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=84;REFWIDENED=8:140975833-140975995;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4092.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:1:11:0:33:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr8	141120359	HG2_PB_SVrefine2PB10Xhap12_7182	ACCCCCTGCAGCAGCTCCCCACATGCTCCCCCTGCAGCAGCTCCCCCTACAGCAGCTCCCTCCTGCAGCAGCTCCCTCCTGCAGCAGCTCCCTCCTGCAGCAGCTCCCTGCTGCACCCCCTGCATCCCCCGTGGTACCTCCCCCTACAGCAGCTCCCCCCATGCTCCCCCTACAGCAGCTCCCTCCTGCAGCAGCTCCCTCCTGCAGCAGCTCCCTCCTGCAGCAGCTCCCTGCTGCACCCCCTGCATCCCCCGTGGTACCT	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7182:HG4_PB_pbsv_9887:HG2_PB_pbsv_9868:HG2_PB_SVrefine2Falcon2Bionano_4635:HG2_PB_SVrefine2PBcRplusDovetail_11301;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7182:HG2_PB_SVrefine2PBcRplusDovetail_11301;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00763359;ClusterMaxSizeDiff=0.00763359;ClusterMaxEditDist=0.0267176;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-261;DistBack=-805;DistForward=-118;DistMin=-805;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=195;REFWIDENED=8:141120360-141120815;PctSeqSimilarity=0.9797;PctSizeSimilarity=0.9962;PctRecOverlap=0.8137;SizeDiff=-1;StartDistance=-48;EndDistance=-49;GTMatch=0;TruScore=92;MatchId=4093.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:23:0|1:23:2:4:21:./.:0:0:0:0:./.:7:1:./.:.:.:.:.:.
chr8	142447089	HG2_PB_SVrefine2Falcon1plusDovetail_12103	AGAGCTGTGGGTCCCGGCCTGGCCCTTCCCGCCATGGGGAGCTGTGGGTCCCGGCCTGGCCCTGCCCGCCGTGGGGAGCTGTGGGTCCCGGCCTGGCCCTGCCCGCCATGGGGAGCTGTGGGTCCCGGCCTGGCCCTGCCCGCCGTGGGGAGCTGTGGGTCCCGGCCTGGCCCTGCCCGCCGTGGGGAGCTGTGGGTCCCGGCCTGGCCCTGCCCGCCGTGGGGAGCTGTGGGTCCCGGCCTGGCCCTGCCCGCCGTGGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7066:HG2_Ill_breakscan11_1432:HG2_PB_pbsv_9886:HG4_Ill_MetaSV_5470:HG2_Ill_MetaSV_5241:HG4_Ill_manta_2423:HG4_Ill_GATKHCSBGrefine_6882:HG3_Ill_GATKHCSBGrefine_6654:HG2_Ill_manta_2839:HG2_Ill_SpiralSDKrefine_17450:HG2_Ill_GATKHCSBGrefine_6754:HG2_10X_allpass_1660:HG3_Ill_Spiral_10503:HG2_Ill_Spiral_705:HG4_PB_pbsv_9904:HG3_PB_pbsv_9618:HG4_PB_SVrefine2PBcRDovetail_4959:HG4_PB_SVrefine2Falcon1Dovetail_6077:HG4_Ill_SVrefine2DISCOVARDovetail_7155:HG3_PB_SVrefine2PBcRDovetail_4530:HG3_PB_SVrefine2Falcon1Dovetail_6052:HG3_Ill_SVrefine2DISCOVARDovetail_7386:HG2_PB_SVrefine2Falcon1plusDovetail_12103:HG2_Ill_SVrefine2DISCOVARplusDovetail_13274;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13274:HG2_PB_SVrefine2Falcon1plusDovetail_12103:HG3_Ill_SVrefine2DISCOVARDovetail_7386:HG3_PB_SVrefine2Falcon1Dovetail_6052:HG3_PB_SVrefine2PBcRDovetail_4530:HG4_Ill_SVrefine2DISCOVARDovetail_7155:HG4_PB_SVrefine2Falcon1Dovetail_6077:HG4_PB_SVrefine2PBcRDovetail_4959;NumExactMatchSVs=8;ClusterMaxShiftDist=0.330357;ClusterMaxSizeDiff=0.330357;ClusterMaxEditDist=0.330357;PBcalls=8;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-259;DistBack=-360;DistForward=-212;DistMin=-360;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=82;REFWIDENED=8:142447090-142447430;PctSeqSimilarity=0.9712;PctSizeSimilarity=1;PctRecOverlap=0.8038;SizeDiff=0;StartDistance=-51;EndDistance=-51;GTMatch=0;TruScore=92;MatchId=4095.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:15:0|1:24:2:2:16:./.:0:0:0:0:0/1:23:13:./.:.:.:.:.:.
chr8	143142365	HG2_Ill_manta_2842	CGTGGCTGTGCTCTATGCTGAGGCCTCAACCTCAGGACATCAGAACGTGGCTGTGCTCTATGCTGAGGCCTCAACCTCAGGACATCAGAAC	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6101:HG2_PB_HySA_17875:HG3_Ill_GATKHC_16033:HG3_Ill_GATKHCSBGrefine_6661:HG2_Ill_GATKHC_16093:HG2_Ill_GATKHCSBGrefine_6760:HG3_PB_SVrefine2PBcRDovetail_4543:HG3_PB_SVrefine2Falcon1Dovetail_6070:HG3_Ill_manta_2319:HG3_Ill_SVrefine2DISCOVARDovetail_7391:HG2_PB_assemblyticsfalcon_27242:HG2_PB_assemblyticsPBcR_26501:HG2_PB_SVrefine2PBcRplusDovetail_11327:HG2_PB_SVrefine2PB10Xhap12_7216:HG2_PB_SVrefine2Falcon1plusDovetail_12123:HG2_Ill_manta_2842:HG2_10X_SVrefine210Xhap12_7081:HG2_Ill_SpiralSDKrefine_17462:HG3_Ill_Spiral_10516:HG2_Ill_Spiral_707:HG3_PB_assemblyticsfalcon_27148:HG3_Ill_svaba_12602:HG3_Ill_Krunchall_13459:HG3_Ill_250bpfermikitraw_13071:HG3_Ill_150bpfermikitraw_12670:HG2_Ill_svaba_12476:HG2_Ill_Krunchall_13781:HG2_Ill_250bpfermikitraw_13466:HG3_PB_HySA_14858:HG2_PB_pbsv_9917:HG3_PB_pbsv_9646;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7081:HG2_Ill_manta_2842:HG2_PB_SVrefine2Falcon1plusDovetail_12123:HG2_PB_SVrefine2PB10Xhap12_7216:HG2_PB_SVrefine2PBcRplusDovetail_11327:HG2_PB_assemblyticsPBcR_26501:HG2_PB_assemblyticsfalcon_27242:HG3_Ill_SVrefine2DISCOVARDovetail_7391:HG3_Ill_manta_2319:HG3_PB_SVrefine2Falcon1Dovetail_6070:HG3_PB_SVrefine2PBcRDovetail_4543;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0331492;ClusterMaxSizeDiff=0.0331492;ClusterMaxEditDist=0.0446927;PBcalls=13;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-90;DistBack=10792;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=95;REFWIDENED=8:143142329-143142513;PctSeqSimilarity=0.9917;PctSizeSimilarity=1;PctRecOverlap=0.9011;SizeDiff=0;StartDistance=9;EndDistance=9;GTMatch=0;TruScore=96;MatchId=4097.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:30:0|1:19:6:3:32:./.:0:0:0:0:0/1:35:13:./.:.:.:.:.:.
chr8	143334826	HG4_Ill_manta_2428	GGTAGGGCGGTCACCCCCCAGTCACCAGCTCCAGTGGCCATTCTGGGCATAGACCCACTGCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7086:HG4_PB_assemblyticsfalcon_26669:HG3_PB_assemblyticsfalcon_27157:HG3_PB_HySA_14863:HG2_Ill_breakscan11_1438:HG4_PB_pbsv_9937:HG2_PB_pbsv_9923:HG3_PB_pbsv_9651:HG4_PB_HySA_14426:HG4_Ill_svaba_12561:HG4_Ill_manta_2428:HG4_Ill_Krunchall_14020:HG4_Ill_GATKHCSBGrefine_6892:HG4_Ill_250bpfermikitraw_13354:HG3_Ill_svaba_12613:HG3_Ill_Krunchall_13468:HG3_Ill_250bpfermikitraw_13081:HG2_Ill_svaba_12485:HG2_Ill_Krunchall_13788:HG2_Ill_GATKHCSBGrefine_6762:HG2_Ill_250bpfermikitraw_13478:HG2_PB_HySA_17891:HG4_Ill_SVrefine2DISCOVARDovetail_7165:HG3_Ill_SVrefine2DISCOVARDovetail_7395:HG2_PB_SVrefine2PBcRplusDovetail_11331:HG2_PB_SVrefine2PB10Xhap12_7222:HG2_PB_SVrefine2Falcon2Bionano_4664:HG2_PB_SVrefine2Falcon1plusDovetail_12127:HG2_Ill_SVrefine2DISCOVARplusDovetail_13284;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13478:HG2_Ill_GATKHCSBGrefine_6762:HG2_Ill_Krunchall_13788:HG2_Ill_svaba_12485:HG3_Ill_250bpfermikitraw_13081:HG3_Ill_Krunchall_13468:HG3_Ill_svaba_12613:HG4_Ill_250bpfermikitraw_13354:HG4_Ill_GATKHCSBGrefine_6892:HG4_Ill_Krunchall_14020:HG4_Ill_manta_2428:HG4_Ill_svaba_12561:HG4_PB_HySA_14426;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.146341;PBcalls=12;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-61;DistBack=1420;DistForward=28;DistMin=28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=144;REFWIDENED=8:143334773-143334977;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4098.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:33:1/1:2:24:2:9:./.:0:0:0:0:1/1:0:28:./.:.:.:.:1203:.
chr8	143365235	HG2_PB_pbsv_9927	AGGGACAGTGTCAATGAACAGAGGCGGGGCCAGTGTCTGTCAGTGAGGGGAGCAGGGACCAGGTTCTGTCAATGAGCAGGGTGGGGGCCAGTGTCTGTCAAAGAGCAGAGTATGGAGCCAGTGTCTGTCGATGAGCAGGGTGAAGGCTAGTGTCTATCAATGAGCGGGTACCAGTGTCTGCCAATGAGCAGAGTGGGGGCTAGTGTCTGCCAATGAGCAGAGGCGGGGCCAGTGTCTGTCAATGAGGAGAGGCAGGGCCAGTGTCTGTCAATGAGCAGAGTG	A	20	PASS	ClusterIDs=HG2_10X_allpass_1661:HG2_PB_pbsv_9927:HG4_PB_pbsv_9945;NumClusterSVs=3;ExactMatchIDs=HG2_PB_pbsv_9927;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0881356;ClusterMaxSizeDiff=0.0881356;ClusterMaxEditDist=0.111864;PBcalls=2;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-281;DistBack=-224;DistForward=-58;DistMin=-224;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1585;REFWIDENED=8:143363710-143365575;PctSeqSimilarity=0.9551;PctSizeSimilarity=1;PctRecOverlap=0.9007;SizeDiff=0;StartDistance=28;EndDistance=28;GTMatch=0;TruScore=95;MatchId=4099.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:0|1:23:4:2:23:./.:0:0:0:0:./.:18:2:./.:.:.:.:.:.
chr8	143494778	HG3_Ill_SVrefine2DISCOVARDovetail_7398	ACACACGCAGACCCACACACACTCACACGCACACACACCACACATTCACACACACTCCTGCAATGCACACACGCAGACCCACACACACTCACACGCACACACACCACACATTCACACACTCCCGCAATGCACACATGCAGACCCACACACACACGTGCACACACCACACATTCACACACATTCCTGCAATGCACACACACAGACCCACACACACACTCTCACACACGCACACACACCACACAGTCACACACCCCTGCAATGCACACACGCACACACACATCTCACACAGCACACACACCACACAGTCACACACTCCTGAAATACACACAAGCAGACACACACGCACACACACCACACATTCACACACTCCTGAAATACACACACATGCACAGACACCCACATACGCACACGCACACACCACTCATTCACATTCTCTCACACACACATATGCACAGACATGCAGCATATGCACATACGTTCTCACACATACATGCACAGACATGTACACAGCACATGCAACACAGACACACACATTCTCATACACATGCACATGCTCCCTGAATAACACGTGCAGACACACAGTGCATGCACACACATATTTCTCACAGCCATGCACACACTCCCTTACACACATGCACAAATATCCCACACACAGCTCATGCACACATGCATGTTTTCACACAATGCACACACTCCCTCACATGCACATTCACACAGACACACGTTCCCACATGCATGTACACACTCCCCACACACATGAACACACCTCACAGAGTGCATGCACATGCACTCCCTTACATGCACAGACACGTGTGTTCACACATGCACACACTCCCTCACACAAGACATGCATGTTCTCACATACATGCACACACTCCCTCATATGCACAGAGATTCATGTT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_9657:HG2_PB_pbsv_9932:HG2_PB_assemblyticsPBcR_26517:HG2_PB_assemblyticsfalcon_27253:HG4_PB_assemblyticsfalcon_26674:HG3_10X_allpass_1999:HG2_10X_SVrefine210Xhap12_7096:HG4_10X_allpass_1927:HG2_10X_allpass_1663:HG3_PB_assemblyticsfalcon_27161:HG3_Ill_MetaSV_5423:HG2_Ill_tnscope_1137:HG2_Ill_MetaSV_5248:HG4_PB_SVrefine2PBcRDovetail_4972:HG4_PB_SVrefine2Falcon1Dovetail_6109:HG4_Ill_manta_2429:HG4_Ill_SVrefine2DISCOVARDovetail_7168:HG4_Ill_MetaSV_5474:HG4_Ill_GATKHCSBGrefine_6894:HG3_PB_SVrefine2PBcRDovetail_4547:HG3_Ill_SVrefine2DISCOVARDovetail_7398:HG3_Ill_GATKHCSBGrefine_6667:HG2_PB_SVrefine2PBcRplusDovetail_11337:HG2_PB_SVrefine2PB10Xhap12_7231:HG2_PB_SVrefine2Falcon2Bionano_4669:HG2_PB_SVrefine2Falcon1plusDovetail_12132:HG2_Ill_manta_2846:HG2_Ill_SpiralSDKrefine_17469:HG2_Ill_SVrefine2DISCOVARplusDovetail_13287:HG2_Ill_GATKHCSBGrefine_6765:HG3_PB_SVrefine2Falcon1Dovetail_6077:HG4_PB_pbsv_9950;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6765:HG2_Ill_SVrefine2DISCOVARplusDovetail_13287:HG2_Ill_SpiralSDKrefine_17469:HG2_Ill_manta_2846:HG2_PB_SVrefine2Falcon1plusDovetail_12132:HG2_PB_SVrefine2Falcon2Bionano_4669:HG2_PB_SVrefine2PB10Xhap12_7231:HG2_PB_SVrefine2PBcRplusDovetail_11337:HG3_Ill_GATKHCSBGrefine_6667:HG3_Ill_SVrefine2DISCOVARDovetail_7398:HG3_PB_SVrefine2PBcRDovetail_4547:HG4_Ill_GATKHCSBGrefine_6894:HG4_Ill_MetaSV_5474:HG4_Ill_SVrefine2DISCOVARDovetail_7168:HG4_Ill_manta_2429:HG4_PB_SVrefine2Falcon1Dovetail_6109:HG4_PB_SVrefine2PBcRDovetail_4972;NumExactMatchSVs=17;ClusterMaxShiftDist=0.119931;ClusterMaxSizeDiff=0.119931;ClusterMaxEditDist=0.124783;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-901;DistBack=5663;DistForward=15214;DistMin=5663;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=51;REFWIDENED=8:143494779-143495730;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:76:1/1:3:27:1:48:./.:0:0:0:0:1/1:0:27:0/1:5:32:.:1831:.
chr8	144056425	HG4_PB_SVrefine2Falcon1Dovetail_6116	CGCAGGCCGGGAGAGCGCAGGCTGGGAGAGCGCAAGGGAGGGAGAGCGCAGGCTGGGAGAGCGCAGGCCGGGAGAGCGCAGGCCGGGAGAGTGCAGGGGAGAGAGAGTGCAGGCTGGGAGAGCGCAGGGGAGAGAGAGTGCAGGCTGGGAGAGCGCAGGCGGGGAGAGAGAGCGCAGGCCGGGAGAGCGCAGGCCGGGAGAGCGCAGGCCGGGAGAGTGCAGGGGAGAGAGAGTGCAGGCTGGGAGAGCGCAGGGGAGAGAGAGTGCAGGCTGGGAGAGCGCAGGGGAGAGAGAGTGCAGGCTGGGAGAGCGCAGGCGGGGAGAGAGAGCGCAGGCTGGGAGAGCGCAGGGAAGAGAGAGCACAGGCTGGGAGGGCGCAGGCTGAGAGAGAGTGCAGGCTGGAAGAGCGCAGGCTGGGAGAGAGAGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7111:HG2_Ill_manta_2849:HG4_Ill_MetaSV_5476:HG4_PB_SVrefine2Falcon1Dovetail_6116:HG4_PB_pbsv_9968:HG2_PB_pbsv_9945:HG2_PB_SVrefine2PBcRplusDovetail_11345:HG2_PB_SVrefine2PB10Xhap12_7240:HG2_PB_SVrefine2Falcon2Bionano_4677:HG2_PB_SVrefine2Falcon1plusDovetail_12140:HG2_Ill_SVrefine2DISCOVARplusDovetail_13295;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7111:HG4_PB_SVrefine2Falcon1Dovetail_6116:HG2_PB_SVrefine2PBcRplusDovetail_11345:HG2_PB_SVrefine2PB10Xhap12_7240:HG2_PB_SVrefine2Falcon2Bionano_4677:HG2_PB_SVrefine2Falcon1plusDovetail_12140:HG2_Ill_SVrefine2DISCOVARplusDovetail_13295;NumExactMatchSVs=7;ClusterMaxShiftDist=0.370546;ClusterMaxSizeDiff=0.370546;ClusterMaxEditDist=0.370546;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-426;DistBack=4113;DistForward=-372;DistMin=-372;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=333;REFWIDENED=8:144056426-144057184;PctSeqSimilarity=0.89;PctSizeSimilarity=0.9765;PctRecOverlap=0.2881;SizeDiff=10;StartDistance=-304;EndDistance=-294;GTMatch=0;TruScore=71;MatchId=4105.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:27:0|1:26:5:0:20:./.:0:0:0:0:./.:15:2:0/0:46:2:.:.:.
chr8	144058297	HG3_Ill_Krunchall_13476	AATCCACTGGCACCTCGATGAAGCAGAAAGCAGGACTTAGCCAGACACTGG	A	20	PASS	ClusterIDs=HG2_PB_HySA_17914:HG4_PB_HySA_14446:HG2_PB_PB10Xdip_29654:HG3_PB_pbsv_9670:HG3_PB_HySA_14885:HG2_PB_assemblyticsfalcon_27270:HG4_PB_assemblyticsfalcon_26691:HG4_Ill_Krunchall_14031:HG4_Ill_250bpfermikitraw_13369:HG4_Ill_150bpfermikitraw_12818:HG3_PB_assemblyticsfalcon_27179:HG3_Ill_svaba_12627:HG3_Ill_Krunchall_13476:HG3_Ill_GATKHC_16059:HG3_Ill_GATKHCSBGrefine_6674:HG3_Ill_250bpfermikitraw_13095:HG3_Ill_150bpfermikitraw_12692:HG3_10X_allpass_2000:HG2_PB_pbsv_9946:HG2_Ill_Krunchall_13795:HG2_Ill_250bpfermikitraw_13488:HG2_Ill_150bpfermikitraw_12662:HG4_Ill_svaba_12578:HG4_Ill_GATKHC_16128:HG4_Ill_GATKHCSBGrefine_6904:HG4_Ill_250bpfermikitraw_13368:HG4_Ill_150bpfermikitraw_12817:HG2_Ill_Krunchall_13794:HG2_Ill_GATKHC_16118:HG2_Ill_GATKHCSBGrefine_6774:HG2_Ill_250bpfermikitraw_13487:HG2_Ill_150bpfermikitraw_12661;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12662:HG2_Ill_250bpfermikitraw_13488:HG2_Ill_Krunchall_13795:HG2_PB_pbsv_9946:HG3_10X_allpass_2000:HG3_Ill_150bpfermikitraw_12692:HG3_Ill_250bpfermikitraw_13095:HG3_Ill_GATKHCSBGrefine_6674:HG3_Ill_GATKHC_16059:HG3_Ill_Krunchall_13476:HG3_Ill_svaba_12627:HG3_PB_assemblyticsfalcon_27179:HG4_Ill_150bpfermikitraw_12818:HG4_Ill_250bpfermikitraw_13369:HG4_Ill_Krunchall_14031:HG4_PB_assemblyticsfalcon_26691;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.117647;PBcalls=9;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=1249;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=8:144058296-144058354;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4106.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:32:1/1:1:22:3:14:./.:0:0:0:0:1/1:1:21:./.:.:.:.:.:.
chr8	144513578	HG2_10X_SVrefine210Xhap12_7124	CGGCTTGTGGGGGGCCGCGGAGAGCGCAGGACTGTGGGGGTCGCGGGACAACGCGGGTGGGTGCGAGCGGCGGGGGCGGGGCCCACGGGCTGGCAGCCCCTCAG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_9997:HG2_Ill_breakscan11_1446:HG4_PB_assemblyticsfalcon_26733:HG4_PB_HySA_14475:HG4_PB_SVrefine2PBcRDovetail_4990:HG4_PB_SVrefine2Falcon1Dovetail_6137:HG4_Ill_svaba_12612:HG4_Ill_SVrefine2DISCOVARDovetail_7186:HG4_Ill_MetaSV_5478:HG4_Ill_GATKHC_16157:HG4_Ill_GATKHCSBGrefine_6917:HG2_PB_pbsv_9973:HG2_Ill_svaba_12528:HG2_Ill_scalpel_9535:HG2_Ill_SpiralSDKrefine_17487:HG2_Ill_MetaSV_5252:HG2_Ill_GATKHC_16149:HG2_Ill_GATKHCSBGrefine_6786:HG2_10X_allpass_1665:HG2_10X_SVrefine210Xhap12_7124;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7124:HG2_10X_allpass_1665:HG2_Ill_GATKHCSBGrefine_6786:HG2_Ill_GATKHC_16149:HG2_Ill_MetaSV_5252:HG2_Ill_SpiralSDKrefine_17487:HG2_Ill_scalpel_9535:HG2_Ill_svaba_12528:HG2_PB_pbsv_9973:HG4_Ill_GATKHCSBGrefine_6917:HG4_Ill_GATKHC_16157:HG4_Ill_MetaSV_5478:HG4_Ill_SVrefine2DISCOVARDovetail_7186:HG4_Ill_svaba_12612:HG4_PB_SVrefine2Falcon1Dovetail_6137:HG4_PB_SVrefine2PBcRDovetail_4990;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0485437;ClusterMaxSizeDiff=0.0485437;ClusterMaxEditDist=0.0776699;PBcalls=6;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-103;DistBack=903;DistForward=8325;DistMin=903;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=8:144513579-144513684;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4107.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:28:0|1:29:4:0:23:./.:0:0:0:0:0/1:27:16:./.:.:.:.:.:.
chr8	144700484	HG3_PB_SVrefine2Falcon1Dovetail_6104	TAAAAGCAGTCACGGCCATGCGCGGTGGCTCAGGCCTGTGATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATTTGAGGTCAGGAGTTCGAGACCAGCCTGGCAAAACATGGTGAAATCCGGTATCTAATAAAAATGAAAAATTAGTCGGGGGTAGTTGCGCGCGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGACCCCAGGAGGCAGAGGTTGCAGTGAGCCCAGGTGGCGCCACCGCACCCCAGCCTGGACGACAGAGCGAGACTCCATCTCAAATAAATAAAATAAAAACAGTCACTCAGGCTGACAAGGGTAAGGGAAATGTGGTCCGCCCCCACCACCTTAACATCTTGCTATGAAAGGACGTTTCATGATGATAACGTTTAAAGACATCCGTAAGGCGATGGCTTTTATCTGACTGGAAGTTAGCAAAACATTAGAGATGACTGAAGTGAGTCGCTGCTGGGTATGTCCACCTGCTCTGGTGATGGGCAGGCAGCGTTGCTTAATAAAGATTTCACAATTTTAGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAAAAAACAAAAAAATTAGCCCGGCATGGTGGGGGGCGCCCGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCCTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAGACTTCACAGTTTCTAAATTGTTATATATTTCTTCCATAAAAATTTAGTTTTCTTCATTTCAGCAGTTACTAATTATGATATTAAAGTCACATAATTTGTATTCTGTTGACCATAGTGTCGAACTACACAATCTTTCTTAAGTCATTGTACTTCTTTTTTGTTTTCAGAGATGGAGTCTTGCTGTGTTGCCCAGGCTGGTCTCAAATTCCTGTCCTGATCACTCAAATTCAAGCATTCCTCCTGCCTTGGCCTCCCAAACCTCTGAGATTACAGGCATGAGCCATTGCACTCGGCTTGTACTCTTCTTTTTAAAAATTGGTTCGGCTGGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGGTCGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAATTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACTAGGGAGGCAGAGGTGACTGCGCTGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAGATTCAATTTGGAGACTTTTTTCTGTTGAGGCAGTAGAAACTGAAATTATCAAAGAAATCCAAAATTTCTTTTTTTGTTTTTTTTGAGATGGAGTCTCGCTCTCTCGCCCAGGCTGGAGTACAGTGGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCAATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCGTGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCCTCTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGCCTGGCCTCCATTTCTTAGATTCAGAAATTAGTCGTGGATTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGCTGCAGTGCAGTGGCGTGATCTTGGCTCACTGTAACCTCCGCCTCCCAGGTTCAAGCGATTCTCGTGCCTCAGCTTCCCTGAGTAGATGGGATTACAGGCGCCCGCCACTACACTTGGCTAATTTTTGTATTTTTATTAGAGACAGGGTTTCGCCATGTTGGCCAGGCTGGTTTTGAACTCCTGATCTCGGGTGATCCGCTTGCTTCAGCCTCCGAAAGTGTTGGGATTACAGGTGTGAACCACTGCACCCAGCCAGTCATGGATTTTTATATATAATGTTTAATTTCACTTTATAATCACCACCTTTATAGAGCGCTGCTCACCATCTGTCTTAGTCTGTTCAGGTCTCTGAAGCACAGAGTGGATGGCTGTAAACAACAGAAATTTATTTCTCACAGATCTGGAGGTTGGGAAGTGCAGGAACCAGGTGCTGGCAGATTCCGTGTCTGGTGTGGCCACTTCCTGGTTCAAGATGGCATCTGTGTCCTCGCCTGCTGGAAAGGGCCAGGAGCCTTTCTCTAGCCTCCTTTATGAGAGCAGTCATCCCATCCCAAAGTCCTCACCTCCTCATACCATCACCTTCGGGGTTAGGATTTCAACAGATAACAAATATTCAGGCCATAGATAGCGCCGTGTCTTACAGCAACAGTCTTTCTCATGCTCCTTCAGGCTTCCCAGTGCTGGAGTATTGTAAACAAAAAGAAAAAGAGCAGGAAGATAGTCTGTCTGTTCACATCTCTCTTTGATTGGCCCTATACCTTAATCTCTAACAGTCAGAAAATCCTTTATGCTAAAATTACCTTAGGATTATTTATGTGAGAATTTTCTCCTTCATAGTCATACAAACATTTTTGTGCCAATTTCCCCTATTTTATTGGTATGCCACTCTTGTGTATTTCATGTGCAGCTTTTTCAATTTAGAAAAATATTTTCTCTAAAATTAAAGAAATGTGTTTTAAAATCCTTTCGAAAGTGAATTTGTCAGTCTTTCTGCTTGGGTTTTGGTGAGCTTTCTCTAACATTATTAATGACCTACAGTTCATATCAAATAGCTGTGGCAGTGAACATTCAAAATTAATTTTGTTTCCCATGAAAGACAATTAGGTATTCATCTGGGTATCCTACACCATTTCCCTTCTCTCTCAGAGCTTCTCAAATCCTGTCTACATCGTATCTGATGCTTTTGACATGTCACTATTCCTATTCTGTGTCCAAGCAGGGAAGGGTTCAAGGTCAAAACGGATCCAGATTTCTTCAAGATGTTCCATCTTTGGGCGAACTTAAGAAATATTGGGCCGGGCGCGGTGGCTCATGCCTACAATCCCAGCATCTTTGGGAGGCTAAAGCAGGAGGATCCCTTGAGCCCAGGAGTTTGAAGCTGTAGTGAGCTGTGATTGTGCCACGGCACTCTAGCCTGGGGACGGAGTGAGAACTTTTCTCTTAAGAAAAAGAAGAGATAATAATAGCATTTGTAATTTTGAATTGTTTTAAGGCAGCGGTCCACAGCCTTTTTGGCACCGGGGATTGGTTTTGTGGAAGACAATTTTTCCATGGACCAGGGCGGGGGTGGTTTCAGGACGAAACTGTTCCACCTCAGATCCTCAGGCATTGGATTCTCATAAGGAGCGCACAACCTAGATCCCTTGTCTGCACAGTTCACAATAGGGTTGGTGCTCCGATGAGAATCTGATGCCACACTGATACCAGAGGAGGGAGAGTTCAAGCTGAAATGCTCACTCGCCTGGCCTCACCTCCTGCTATGTGGCCCAGTTCCTAACAGGCCACAGACCGGAACTGGTCCATAGCCTGGGGGTTGGGGATCCCTCTTATAAGGAATATCACTGGTCTCAGATGTGCAGTTGAATCCACATCTCTTAGTAACAAATTAAAACAATGTACCAGGCCAGTAATTCACGCCTGTAATCACAGTGCTTTGCGAGGTGGAGGTATCACCCTTGAGGCCAGAAGTTTGAGACAAGCCTGGCCAACATAGTGAGACCCCGTCTCTACAAAAAATAAAAAATTAGCCAGAGGCCAGGCACGGTGGCTAACCCTTGTAATCCCAGCATTTTGGGAGGCTGAGGTGGGCAGATCACCTGAGGTCAGGGGTTCGAGACCATCCTGGCCAACATGGTAAAACCCTGTCTCTACTAAAAATACAAAAAAAAAATTAGCCAGGCATGGTGAGGGGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCATGAGAATTGCTTGAACCCGGGAGGTAGAGGTTGCAGTGAGCTGAGGTTGTGCCACTGCACTCCAGCAGGGGCAACAGAGTGGGACTCCGTTTCAAAAAAAAAAATTAGCTGGATATGGTGCTGCATGCCTGTGGGTCCAGCTACCTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGGTCGAGGCTGCAGTGAGCTATGATTACACCACTGCACTCCAGCCTGGGCGACAGAGTGAGGCCCTGTCTCAAATCAAACAAAAAAACCCAATCGGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAATATGGTGAAGGAAGTTAATTAATTAACTCTCAAAGTGCTGGGATGACAGGTGTGAACCACTATGTCCGGCGGAAATACAAATTAAAACCACAAAGAGAGGGAGAGGGGAGTAAAAAAACCCTAAAACCACAAAAAGAGCATTTTATATCCATCAGATTGGCCCATTTAACCATCAGATGGTGCCTAGGGTTGGTGAGGACGCAGAGCTACAGGTGGCACAGACACTACGAGACAGGAGGTCCCCCTCGCAGAGTCGCAGGCCGATCCCTGTCTGCACAGCAGCGACGCTCCCAGAGTCTACCAGAGAGGGTGTCCTGTGTGTGCACTGGGAGACGGCGCAGGAATTCCACAGCAGCCCTGCAGTAAAGCAAAAAGATGCAGACAGCACTGACGGCCTGGACAGGAGAATGGATGGATAAGTGATGTTGATACCAGAAACTATTTTTCTGTGAAAATGGATATGTCAGCCTGAAGTAATCAAAAGGTTAGAATCAGTTTTTTTGTGTCGTTTTGTTTTGAGATGGAGTTTCGCTCTTGCTGCCCAGGCTGGAGTTCAATGGCGTGCTCTCGGCTCACCGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACAGACATGCACCAACATGGCTAATTTTTTTTTTTTTTTTTTTTTTTGTAGAGATGGGTTTCTCCATGTTGGTCAGGTTGGTCTCAAACTCCTGACCTCAGGTGGTCTGCCTGCCTCGGCCTCCCAAAGCGCTGGGATTATAGGCGTGAGCCACTGCGCCTGGCCCAGAATCAGTTTTGTATTATTTTGTTTTGAGGCAGGGTCTTGCTCTATTGCTAGACCCTGTCCCAGAACAAAACAAAACAAAACAAAAATTCAACTGCCCACTGGAGTGCAGTGGCCAATCATGGCTCACTGAATCTTTGGCCTCCTGGGTCCAAGCAATCCTTCTACCTTGGCCTCCTGAGTAGCTGGAACTAGGGGTGTGCACCACCACACCCAGCTAATTCTTGCATTTTTTTGTAAAGATGAGGTCTCCCTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTAGCGCCCAGGCTGGAGTGCAGTGGCACTATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCGCACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGATGCCCGCCACCGTGTCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCGAGTTCTCCCTATTTTGCCTAGGCTGGCCTCAAACTCCTGGACTCAAGCAGTCTTCCTGCCTTGGCCTTCCAAAGTGCTGGAATTACAGGACTGACCCACCATGCCCAACCCAGAATTAGTTTTAAAGAGTTTATTCAGGCAAAAAGCTGGGAATAGCTACCTAGGAGACACTGACTGCAGAGAAATGGGTTCAATGTTCCTGTATTAGTCTGCTTTCACACTGCTGATAAAGACATACCCAAGACTGGGCAATTTACAAAAGAAAGAGGTTTATTGGACTTAGAGTTCCATGTGGCTGGGGAGGCCTCACAATCATGATGGAAGGTGAAAGGCATGTCTCATATGGTGGCAGGCAAGAGAGCTTGTGCAGGGAAACTCCCCTTTATATAACCATCAGATCCTGTGAGCCATACTCACTATCACGAGAACAGCACAGGAAAGACCTGCCCCTGAGATTCAATTACCTTCCTACCAGGTTCCTCCTACAACACGTGGGAATTCCAGATGAGATTTGGGTGGGGACACAGCCAAACCATATCAGTTCCAAAGTTAAAAGTTAAGTTCTTGCTTATTAGAGACAGAAAACAAAGACGTTTACCTGGATTACAAAATTTTCTATACAAGGCTGGTTTAAGAGGTACGACAAATTAATTAGTTGGTTTCAGTGTGTTTTCTTTTCCCTACAGCATGTTTTCATTTCCTTTCTAACTTAAAAGAGTATATTTAACATTCCATCTTAATACAACTTGAGAGCCATAAAGCCTTTGTGTGAGGCAGCTGAGAAGGAGGTTAATCTACAGTGAAAGTCAACATTGGAGAGGCAAGGGCTCTTCCCTGGTACCCTTCAGCCATTTACAGCCTTTTACGAAACAATGCATGCAAGGAAGAAGGCTTAATCTAAAATCAGAGAAAAAAAAGGTTCTAGTTGCCTAGGTTACATACAACTGTCTGTCACATGACTCAGGTCTATAAGCATTCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCACTGCAACCTCTGCCCCCCAGGTTCAAACAATTCTCCTGCCTCACCCTCCCAAGTAGCTGGGACTAGAGGCACACACCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCACGTTGGCCAGCCTGGTCTTGAACCCCTAACCTCAAGTGATCCACCCCCATCAGCCTCTCAAAGTGCTGGGATTACAGGCATGAGCCACCGGGCCTTGTCTCATAATCATTCTTTTAAGGCTTAAAATAATTTAGAGTTTCAACAGCTTAGATTTTGAATTATTTATTTTCACTGATAATTTATAGCTTCATATATTGGCAAATCTCAAAAATCTCAAAAAACATAACATGGAATGAAAAAGGCAGTGCTGTGGGTTGAATTACATCAACCAAAAAGCTATATTCAACTCCTAACCCCCAACTTACTGGTGAAGGTGACCTTTTTGGGAATGGGGTCTTTGCAGATGTCATCAAGTTAACATGAGGTCATATGGAGGTAGGGTGGGCCCAAATCCAGTGACTGATTTTTTTTTTTTTTTTCTGAGACAGAGTCTACCTCTGTCGCCCAGGCTGGAGTGCACTGGTGCCATCTTGGCTCACTGCAACCTCCACCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGACTATAGGTGCCTGCCACCACGCCCGGCTAATTTTTTGTAGTTCTAGTAGAAACGGGGTTTCACTGTAGCCAGGATGGTCTTGATCTCCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAAGCATGAGCCACCACGCCTGGCCTTTTTTTTTTTTGTTTTTGAGACAGAGTCTCTCTGTCGCCCTGACTGGAATGCAATGACGCGATCTTGGCTCAGTGCAACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCAGTGTAGCTGGGATTACAGGAGCATGCTGCCACGCCCGGCTAACTTTTTGTATTTTAGTAGAGATGGAGTTTCACCGTGTTGCCCAGGCTGGTCTCAAACTCCTGAGCTCAGGCAATCCTCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGCGCCGCCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATATTGGTCAGGCTGGTCTTGAACTCCCGATCTCAGGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCACTGTGCCCGGCCCGATATTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCTAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAGGCTCCGCCCCCCGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACCTGCCATCTCGCCCGGCTAATTTTTTTTGTATTTTTACTAGAGACAGGGTTTCACCGTTTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCACTGCGCCCGGTCCGATATTCTTATAAAGAGAGGAAATCTGGACACAGGGAGAAGACGGCTCCGTGATGATAGAGGCAGCTGTTGGAGAGATGCCGCTACAGCCAGAGAGTGCCAAGGATTGCCGGCCATCACCAGAATCGGGAAGAGGCTGCAAAGATTCCTCTCTAGATCCTTTGGAGGGAGCACAGTGCTACAGACACCCTGATTTTGAACGTCTAGCTTCTAGAACCACAGGACAATAACCTTGCGTTGTTTTGTGGCAATTAGCTGGGGCAGCCCCACGAGGTGTCTGCAGGCCTGCGTACACATCCTGCCTGTGCAGATGAGTGCCCTGACGGGGACGGAGAACTTCCCCTCCACCCTCTGAGCATTTGATACCTGAGCCTGTGGATCAATTGACCACAGGCAGATGAACAGGAGAAAAGGTGGACAAATATCTTCCATGCACAGGGCCATCCCAGGAAAGAAAAGTAAATATCTACACTAAACCCAGGGAGATCTAGAAGCTCTGACACTCTCAGCACAGGGGAGATGCAGGGGGATGTAGGCAACTTCAGGAGAGTCGATGTATTACATGGCATTTTTTGTATTTTTAAATTTTAATTTAATTAATTAACTTTTTTGTTTTTGAGATGGAGTCTCTCTCTGTGGCCGAGGCTGGAGTGCAGTGGCACCATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCTTCCCAAGTAGCTGGGATTGCAGGCCCTGGCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGCTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCTGCCTGCCTTGGCCTCCCAAGGTGCTGGGATTACAGGCGTGAGCCTCTGTGCCCAGTCCCTCTGTTTTTTTACTCCAAAGGTAAACCATTTTAAATGATTTCTTATTAATACCTCCAATAATCTTTCTCTAAAGAGAAAACCAATTTTTATCTTTGCATCAGTATACTACTAATACTAAAGTTAATTTTTTTTTTTTTTGAGACAGAGTCTTACTCTGTCACTCAAGCTGGAGTGCAGTGGCATGATCGCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACATGTGCCTGCCTTAATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCTATCGTGCCCGGCCCCTAAAGTTAATTTTAATATAACTTTATAAACATATCTATCCGATTTCAGTTTTTATCACAGAAGATAAGATTTCCAAAAACATTTTATAACCTTTTACAACTTTCTATTAAAGAGCGGATCAATGCTCCAGGAAAACTCTGTTATTCCAACACAGGGCCCAGACTCTGGCTCTGCATCTGTGTGCTTTGTATATTAATGCTCAATTTTTAGTAAAACTAAATGATCCCCTTCTAATTTTAGCCATCTTGATCACACACACTTTTTTCTTTTCTTTTCTTTTCTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGTAATCTCCGCCTCTCAGGTTCAAGCGATTCTCTTGTCTCAGCCTCCCGAGTAGCTGGGATTACAGGGTGCACCATCATGCCCGGCTAATTTTTGTATTTTTAGTAGATAAGGGGTTTCACCCATGTTGGCGTCTTATTTTTTTTGGGACAAGGTCTCACTCTGTGGCCCAGGCTGGAGTACAGTGGCGTGAACGTGGCTCACTGTGTCGCCCAGGCTGGAGTACAGTGGCGTGAACGTGGCTCACTGTGTCGCCCAGGCTGGAGTACAGTGGCGTGAACGTGGCTCACTGTGTCGCCCAGGCTGGAGTACAGTGGCGTGAACGTGGCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCGTGAACGTGGCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCGTGAAGGTGGCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCGTGAACGTGGCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGTGTGAACGTGGCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCGTGAACGTGGCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCGTGAACGTGGCTCACTGCAGCCTTGTACTCCTAGGTTCAAGCAATCCTCCCGCCGCAGCCTTTTGAGTAGCTAGGACTACAGGTATGTGCCACCACACCTGGCTAATTCTTTGGATTTTTAGTAGAGATGAGGTCTTGCTATGTTGCCCAGGCTTATCTTGAAGTCCTGAGCTCAAGCAGTCCTCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGAGCCCAGCCAGAAAATTCTTTCCACAAGATTCATCTTCCACAAACCTTGCACAACTCACTACCCCTCCAGTTTTAGCCTATACTTCCTTTTTATATTGGCATTCTGTACTAGGACCAAAATTGTTTTCCTTCCCCCATTATTTTGACCACACAAAATTCTCCTATGTAAAAGAAAAAAAATTGGCCAGGTGTGGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCTGAGGTGGGTGGTTCACAAGGTCAGGAGTTCGAGACCACCCTGGGCAACATGGTGAAACCCAGCCTCTACCAAAAATATAACAAAATTAGCCGGGTATGGTGGAAGGCGCCTGTAATCCTAGCTTCTCCGGAGACTGAGGTAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCACACTACTGCACTCCAGCCTGGGCAACGGAACGAGACGCCAGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACTGGTAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAATATGGTGAAACCCCGTCTCTAATAAAAATACAAAAATTAGCTGGCGTGGTGGTGGGTGCCTGTAGTCCCAGTTACTCGGGAGGCTGAGACAGGAGAATTGCTTGAACCTGAGGCAGAGGTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCGACACAGCGAGACTCCGTCTCAAACAAAACAAAACAACACACACACACACACACACACACACACACACACACTCACTGTGAACCACTGCTGTTGGCCACCTCCAAAACTGCACAGCCCCCTGTGTAATTAACACTCACTGCAGACCACTGCTGTCAGCCACCTCCAAAACTGCAGCTCTCACCTATGACTAACTAGCCATCACACACGCAAAAGCACATAGTGTCTCACAGTACAAAGTAATCTCTGGTGGCCAGGTGCAGTGGTTCACAGCTGTAATCCTAGCACTTTGGGAGGTCGAGGCTGGTGGATCAACTGAGGTCAGGAGTTCAAGACCAGCCTGGCTAACATGGTGAAACCCCGTCTCTACAAAAATACAAAAAGTAGCCTGGCGTGGTCGTGGTTGCCTGTAATCCCAGCTACTCAGGAGACTGAGGTGGGAGAATCGCTTGAACCCGGGAGGTGGAGGGTGCAGTGAGCTGAGACCGTGCCATTGCACTCTAGCCTGGGCAACAGAGCCAGACTCCATCTCAAAAAATAAAAAATAAAAAAAATAAATAAATAAAAAAAACAAAAAACAAAAAACAAAGTAATCTCTGGTGCCCCCCAAAGCCAAAGAGATCAGGTGATACAATACAAAGAGAGCAGAGTTTTAGACCTGAGAGGACCCTGTCCATGACTCTTCAGCCTCCACAGGACGACCCAAAAGGGTGTGAGTGCCACCTTTTTCTGTGTTCCTTAAGGGGTCTGAGACACTGGACATCTTGTGATACCAAGACAGCAGAGGAGGGAGGAGCTTGAACCTCAGCTTTCAGTTAAGCTGACTTTTAACCATAGAGTTTTTTTTTTTTTTTTTTTTTTGGATATGGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAATGGTGTGATCTTGTCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCCCAGCCTCCCAAGTAGCTGGGATTATAGGCGCGCGCCACCACACCCAGCTAATTTTGTATTTTTAGAAGAGATGGGGTTTCACCATGTTAGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACCGCACCCGGCCAGAGATCTTTTAAAAAAATATTTTTGATGAAGGGCAGGCGAGCCCCAAAATTGTGGCTTAGCCCACGAGGGTTCTTGGCTTTGCCCAGGAAAGAATTCAAGAGCGAGCCTATGGTGTTCAAAGCACCTTTGATTGAAGTGGCGTGTACAGCAGCAGCAGAGGGACTGCTCCTTGCAGACAGGGCTACCCCATAGGCAGTGAGCCCAGGGAAGCAGCTCAGAGGCACTTCTGCAGTCACATGTATATCCACTTTTAATCATATGCAAATTAAGGGGTAGCTTATGCAGAAATTTCTAGAATTAGGCCAGGTGAGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACCTGAGGTCAGGGGTTCGAGACCAGCCTGACCAACATGGTGAAACCCATCTCTACTAAAAATACAAATATTAACCAGGTGTGGTAGCGCACGCCTGTGGTCCCACTACTTAGGAAGCTGAGGCAGGAGAATCACTTGAACCCTGGGGGCAGAGGCTGCAGTGAGCCGAGATCACGCCATTGCACTCCAGCCTGGGCAACAGAGTGAGAACCTGTCTCAAAAAAAAAAAAAAAAAAAAAGAAATTTCTAGAATTAGCTTGGTAAGTTCTGCATTGTCTGTTTGTTGCCATGGAAAGAGGCGGTAGCTTCCGGTGTTGCCATGGCAATGGTAAACTGATATGGCACACTGGTGGGTGTGCCTTACAGGAGGCTCTTCTGCCCTGGACCTGTTTTAGCTAGTCCTCAGTTTGGTCCCATGTCCAAGCCCTGCCTCCGGAGTTGAGCTCCACCTCCTACCTCATTTTCTTTTTTTCTTTTTTAGAGACAGAGTTCCACTCTTGTTGCCCAGGCTGTAGTGCAATGGCATGATCTTGGCTCACTGCAACCTCCACCTTCCAGGTTCAAGCAATTATCCTACCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCGTGCCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGACGAGGTTTCATCATGTTGGTCCAGCTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGAGAGCCACCACACCCGGCATCATTTACTTTTGGATGTGCTTTGTGATACTCAGAAGAGACCTGCCTCCAGGCCACCCCTACCTTCTCTCTCCACCTGCAGGCACCTGAGGCCGCCTCTGTCTCATCCATCTTGAGTCTTGTGTGGGCTCAGCGATGCCCCTCCTTGCACGCATCACTCGTTTTCTCCCGGTGTCTGTCCCTCAAGATGGCCACTACTGCCACAACTCCCATCTGCACGTCTCGGGTCCTTCTCCAGCTACCAGCAGATTTTAAAAATCTTTTAATTTTTTGGCCTCACTTAGCAGCAAGGTCTC	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_5435:HG2_10X_allpass_1666:HG4_PB_SVrefine2Falcon1Dovetail_6139:HG2_Ill_Krunchall_13819:HG2_Ill_tnscope_1140:HG3_PB_pbsv_9706:HG3_PB_SVrefine2PBcRDovetail_4566:HG3_PB_SVrefine2Falcon1Dovetail_6104:HG2_PB_pbsv_9976:HG2_PB_SVrefine2PBcRplusDovetail_11364:HG2_PB_SVrefine2PB10Xhap12_7262:HG2_PB_SVrefine2Falcon2Bionano_4695:HG2_PB_SVrefine2Falcon1plusDovetail_12157:HG2_Ill_MetaSV_5253;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_MetaSV_5253:HG2_PB_SVrefine2Falcon1plusDovetail_12157:HG2_PB_SVrefine2Falcon2Bionano_4695:HG2_PB_SVrefine2PB10Xhap12_7262:HG2_PB_SVrefine2PBcRplusDovetail_11364:HG2_PB_pbsv_9976:HG3_PB_SVrefine2Falcon1Dovetail_6104:HG3_PB_SVrefine2PBcRDovetail_4566:HG3_PB_pbsv_9706;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00505653;ClusterMaxSizeDiff=0.00505653;ClusterMaxEditDist=0.00505653;PBcalls=9;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-14208;DistBack=59322;DistForward=-14208;DistMin=-14208;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=8:144700485-144714695;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:65:./.:30:16:11:14:./.:0:0:0:0:0/1:63:24:0/1:365:178:13408:.:.
chr8	144723602	HG2_Ill_manta_2853	AGTGAGTAGTGTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_9707:HG2_10X_allpass_1667:HG4_PB_assemblyticsfalcon_26737:HG3_PB_assemblyticsfalcon_27222:HG4_Ill_Krunchall_14052:HG3_Ill_Krunchall_13500:HG2_Ill_Krunchall_13820:HG4_PB_pbsv_10003:HG4_Ill_MetaSV_5480:HG3_Ill_MetaSV_5436:HG2_Ill_tnscope_1141:HG2_Ill_MetaSV_5255:HG4_PB_SVrefine2PBcRDovetail_4993:HG4_PB_SVrefine2Falcon1Dovetail_6140:HG4_Ill_svaba_12619:HG4_Ill_manta_2434:HG4_Ill_SVrefine2DISCOVARDovetail_7190:HG4_Ill_GATKHCSBGrefine_6920:HG4_10X_allpass_1931:HG3_PB_SVrefine2PBcRDovetail_4567:HG3_PB_SVrefine2Falcon1Dovetail_6105:HG3_Ill_svaba_12669:HG3_Ill_scalpel_9660:HG3_Ill_SVrefine2DISCOVARDovetail_7421:HG3_Ill_GATKHCSBGrefine_6687:HG3_10X_allpass_2003:HG2_PB_pbsv_9977:HG2_PB_SVrefine2PBcRplusDovetail_11365:HG2_PB_SVrefine2PB10Xhap12_7263:HG2_PB_SVrefine2Falcon2Bionano_4696:HG2_PB_SVrefine2Falcon1plusDovetail_12158:HG2_Ill_svaba_12534:HG2_Ill_scalpel_9537:HG2_Ill_manta_2853:HG2_Ill_breakscan11_1447:HG2_Ill_SVrefine2DISCOVARplusDovetail_13306:HG2_Ill_GATKHCSBGrefine_6787:HG2_10X_SVrefine210Xhap12_7128;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7128:HG2_Ill_GATKHCSBGrefine_6787:HG2_Ill_SVrefine2DISCOVARplusDovetail_13306:HG2_Ill_breakscan11_1447:HG2_Ill_manta_2853:HG2_Ill_scalpel_9537:HG2_Ill_svaba_12534:HG2_PB_SVrefine2Falcon1plusDovetail_12158:HG2_PB_SVrefine2Falcon2Bionano_4696:HG2_PB_SVrefine2PB10Xhap12_7263:HG2_PB_SVrefine2PBcRplusDovetail_11365:HG2_PB_pbsv_9977:HG3_10X_allpass_2003:HG3_Ill_GATKHCSBGrefine_6687:HG3_Ill_SVrefine2DISCOVARDovetail_7421:HG3_Ill_scalpel_9660:HG3_Ill_svaba_12669:HG3_PB_SVrefine2Falcon1Dovetail_6105:HG3_PB_SVrefine2PBcRDovetail_4567:HG4_10X_allpass_1931:HG4_Ill_GATKHCSBGrefine_6920:HG4_Ill_SVrefine2DISCOVARDovetail_7190:HG4_Ill_manta_2434:HG4_Ill_svaba_12619:HG4_PB_SVrefine2Falcon1Dovetail_6140:HG4_PB_SVrefine2PBcRDovetail_4993;NumExactMatchSVs=26;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.1;PBcalls=13;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=-943;DistForward=19645;DistMin=-943;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=8:144723603-144723948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:57:1/1:2:13:3:17:./.:0:0:0:0:1/1:0:31:0/1:3:12:13408:.:0.904019
chr8	145503113	HG3_Ill_scalpel_9669	TGACCACCAAGGGCCATGACCGTCACGGGCCACGACCGCCATGGGCCATGACCCCCATGGGCCTCAAGACCACCACAGGCCAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7143:HG4_PB_HySA_14491:HG2_PB_HySA_17988:HG2_PB_pbsv_9992:HG4_PB_pbsv_10015:HG4_Ill_svaba_12633:HG4_Ill_scalpel_9290:HG4_Ill_Krunchall_14061:HG4_Ill_GATKHC_16176:HG4_Ill_GATKHCSBGrefine_6924:HG4_Ill_Cortex_3765:HG4_Ill_250bpfermikitraw_13406:HG4_Ill_150bpfermikitraw_12850:HG4_10X_allpass_1934:HG3_PB_pbsv_9721:HG3_Ill_svaba_12685:HG3_Ill_scalpel_9669:HG3_Ill_Krunchall_13512:HG3_Ill_GATKHC_16107:HG3_Ill_Cortex_3806:HG3_Ill_250bpfermikitraw_13129:HG3_Ill_150bpfermikitraw_12726:HG3_10X_allpass_2006:HG2_Ill_svaba_12546:HG2_Ill_scalpel_9545:HG2_Ill_SpiralSDKrefine_17501:HG2_Ill_Krunchall_13826:HG2_Ill_GATKHC_16164:HG2_Ill_GATKHCSBGrefine_6791:HG2_Ill_Cortex_9180:HG2_Ill_250bpfermikitraw_13522:HG2_Ill_150bpfermikitraw_12690:HG2_10X_allpass_1669:HG2_Ill_breakscan11_1450:HG4_PB_SVrefine2PBcRDovetail_4999:HG4_PB_SVrefine2Falcon1Dovetail_6151:HG4_Ill_SVrefine2DISCOVARDovetail_7197:HG3_PB_SVrefine2PBcRDovetail_4578:HG3_PB_SVrefine2Falcon1Dovetail_6118:HG3_Ill_SVrefine2DISCOVARDovetail_7430:HG2_PB_SVrefine2PBcRplusDovetail_11377:HG2_PB_SVrefine2PB10Xhap12_7276:HG2_PB_SVrefine2Falcon2Bionano_4707:HG2_PB_SVrefine2Falcon1plusDovetail_12171:HG2_Ill_SVrefine2DISCOVARplusDovetail_13314;NumClusterSVs=45;ExactMatchIDs=HG2_10X_allpass_1669:HG2_Ill_150bpfermikitraw_12690:HG2_Ill_250bpfermikitraw_13522:HG2_Ill_Cortex_9180:HG2_Ill_GATKHCSBGrefine_6791:HG2_Ill_GATKHC_16164:HG2_Ill_Krunchall_13826:HG2_Ill_SpiralSDKrefine_17501:HG2_Ill_scalpel_9545:HG2_Ill_svaba_12546:HG3_10X_allpass_2006:HG3_Ill_150bpfermikitraw_12726:HG3_Ill_250bpfermikitraw_13129:HG3_Ill_Cortex_3806:HG3_Ill_GATKHC_16107:HG3_Ill_Krunchall_13512:HG3_Ill_scalpel_9669:HG3_Ill_svaba_12685:HG3_PB_pbsv_9721:HG4_10X_allpass_1934:HG4_Ill_150bpfermikitraw_12850:HG4_Ill_250bpfermikitraw_13406:HG4_Ill_Cortex_3765:HG4_Ill_GATKHCSBGrefine_6924:HG4_Ill_GATKHC_16176:HG4_Ill_Krunchall_14061:HG4_Ill_scalpel_9290:HG4_Ill_svaba_12633:HG4_PB_pbsv_10015;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.0484848;PBcalls=13;Illcalls=28;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-82;DistBack=809;DistForward=1712;DistMin=809;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=8:145503090-145503207;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:5:23:1:11:./.:0:0:0:0:1/1:0:29:./.:.:.:.:.:.
chr8	145603812	HG3_PB_SVrefine2Falcon1Dovetail_6123	CGGCTGGGTGCAGAAACAGATGTGCACTCAGACACCTGCTGCACTCAGGATTATGGGCCGGGTGTAGAAACAGATGTGTGCTCAGGCACCTGCTGCACTAAGGATTATGGGCCGGGTGTAGAAACAGATGTGTGCTCAGGCACCTCCCGCAGTCAGAATTATGGGCCGGGTGTAGAAACAGATGTGTGCTCAGGCACCTCCCGCAGTCAGAATTATGGGCCAGGTGTAGAAACAGATGTGTGCTCAGGCACCTGCCGCAGTCAGGATTATGGGCCGGGTGTAGAAACAGATGTGTGCTCAGGCACCTGCTGCACTCAGGATTATGGGCTGGGTGTAGAAACAGATGTGTGCTCAGGCACCTGCTGCACTCAGGATTATGGGCTGGGTGTAGAAACAGATGTGTGCTCAGGCGCCTGCTGCACTCAGGATTATGGGCTGGGTGTAGAAACAGATGTGTGCTCAGGCGCCTGCTGCACTCAGGATTATGGGCTGGGTGTAGAAACAGATGTGTGCTCAGGCGCCTGCTGCACTCAGGATTATGGGCTGGGTGTAGAAACAGATGTGTGCTCAGGCGCCTGCTGCACTCAGGATTATG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12175:HG2_PB_pbsv_9999:HG3_PB_pbsv_9727:HG4_PB_pbsv_10021:HG4_PB_SVrefine2Falcon1Dovetail_6154:HG3_PB_SVrefine2Falcon1Dovetail_6123:HG2_PB_SVrefine2PBcRplusDovetail_11381:HG2_PB_SVrefine2PB10Xhap12_7282:HG2_PB_SVrefine2Falcon2Bionano_4711;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12175:HG4_PB_SVrefine2Falcon1Dovetail_6154:HG3_PB_SVrefine2Falcon1Dovetail_6123:HG2_PB_SVrefine2PBcRplusDovetail_11381:HG2_PB_SVrefine2PB10Xhap12_7282:HG2_PB_SVrefine2Falcon2Bionano_4711;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00336984;ClusterMaxSizeDiff=0.003367;ClusterMaxEditDist=0.020202;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-594;DistBack=7234;DistForward=-595;DistMin=-595;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=3008;REFWIDENED=8:145603813-145607414;PctSeqSimilarity=0.9752;PctSizeSimilarity=1;PctRecOverlap=0.6622;SizeDiff=0;StartDistance=-201;EndDistance=-201;GTMatch=1;TruScore=87;MatchId=4112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:12:26:./.:4:18:1:1:./.:0:0:0:0:0/0:55:1:0/1:19:4:.:.:.
chr8	145669839	HG4_Ill_svaba_12638	CGGCCCCGCCCCTCGCCGCCGACACGCAGGCCCCGCCCCTCGCCGCCGACACGCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7151:HG3_PB_HySA_14954:HG2_PB_HySA_17995:HG4_PB_HySA_14501:HG4_PB_pbsv_10022:HG3_PB_assemblyticsfalcon_27242:HG2_PB_pbsv_10000:HG4_PB_assemblyticsfalcon_26756:HG4_PB_SVrefine2PBcRDovetail_5002:HG4_Ill_svaba_12638:HG4_Ill_SVrefine2DISCOVARDovetail_7201:HG4_Ill_Krunchall_14064:HG4_Ill_GATKHCSBGrefine_6928:HG4_Ill_250bpfermikitraw_13409:HG4_Ill_150bpfermikitraw_12853:HG3_PB_pbsv_9728:HG3_PB_SVrefine2PBcRDovetail_4582:HG3_Ill_svaba_12688:HG3_Ill_SVrefine2DISCOVARDovetail_7433:HG3_Ill_Krunchall_13516:HG3_Ill_GATKHCSBGrefine_6698:HG3_Ill_250bpfermikitraw_13132:HG3_Ill_150bpfermikitraw_12728:HG2_PB_SVrefine2PBcRplusDovetail_11382:HG2_PB_SVrefine2PB10Xhap12_7283:HG2_PB_SVrefine2Falcon2Bionano_4712:HG2_PB_SVrefine2Falcon1plusDovetail_12176:HG2_Ill_svaba_12551:HG2_Ill_manta_2856:HG2_Ill_SpiralSDKrefine_17503:HG2_Ill_SVrefine2DISCOVARplusDovetail_13318:HG2_Ill_GATKHCSBGrefine_6795:HG2_Ill_250bpfermikitraw_13525:HG2_Ill_150bpfermikitraw_12693;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7151:HG4_PB_assemblyticsfalcon_26756:HG4_PB_SVrefine2PBcRDovetail_5002:HG4_Ill_svaba_12638:HG4_Ill_SVrefine2DISCOVARDovetail_7201:HG4_Ill_Krunchall_14064:HG4_Ill_GATKHCSBGrefine_6928:HG4_Ill_250bpfermikitraw_13409:HG4_Ill_150bpfermikitraw_12853:HG3_PB_pbsv_9728:HG3_PB_SVrefine2PBcRDovetail_4582:HG3_Ill_svaba_12688:HG3_Ill_SVrefine2DISCOVARDovetail_7433:HG3_Ill_Krunchall_13516:HG3_Ill_GATKHCSBGrefine_6698:HG3_Ill_250bpfermikitraw_13132:HG3_Ill_150bpfermikitraw_12728:HG2_PB_SVrefine2PBcRplusDovetail_11382:HG2_PB_SVrefine2PB10Xhap12_7283:HG2_PB_SVrefine2Falcon2Bionano_4712:HG2_PB_SVrefine2Falcon1plusDovetail_12176:HG2_Ill_svaba_12551:HG2_Ill_manta_2856:HG2_Ill_SpiralSDKrefine_17503:HG2_Ill_SVrefine2DISCOVARplusDovetail_13318:HG2_Ill_GATKHCSBGrefine_6795:HG2_Ill_250bpfermikitraw_13525:HG2_Ill_150bpfermikitraw_12693;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0917431;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.0917431;PBcalls=14;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=68;REFWIDENED=8:145669840-145669961;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:2:40:2:20:./.:0:0:0:0:1/1:0:55:./.:.:.:.:.:.
chr8	145849928	HG3_PB_SVrefine2PBcRDovetail_4589	AGCATCCCCCGTCCCGGCGGCCCGGTTCACGGAGCACTCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACTCACTGCACACTGCGGCATCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACTCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACTCACTGCACACTGCGGCAGCCCCTGTCCCCGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCATCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCATCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACTCACTGCACACTGCGGCATCCCCTGTCCCCGCGGCCCCGTTCACGGAGCACTCACTGCACACTGCG	A	10	PASS	ClusterIDs=HG4_PB_pbsv_10028:HG2_PB_pbsv_10007:HG3_PB_pbsv_9735:HG4_PB_SVrefine2PBcRDovetail_5005:HG3_PB_SVrefine2PBcRDovetail_4589:HG2_PB_SVrefine2Falcon2Bionano_4716:HG2_PB_SVrefine2Falcon1plusDovetail_12181:HG4_PB_SVrefine2Falcon1Dovetail_6160:HG3_PB_SVrefine2Falcon1Dovetail_6130:HG2_PB_SVrefine2PBcRplusDovetail_11387:HG2_PB_SVrefine2PB10Xhap12_7286;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12181:HG2_PB_SVrefine2Falcon2Bionano_4716:HG3_PB_SVrefine2PBcRDovetail_4589:HG4_PB_SVrefine2PBcRDovetail_5005;NumExactMatchSVs=4;ClusterMaxShiftDist=0.172452;ClusterMaxSizeDiff=0.172452;ClusterMaxEditDist=0.172452;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-969;DistBack=150;DistForward=-960;DistMin=-960;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=889;REFWIDENED=8:145849929-145851786;PctSeqSimilarity=0.9826;PctSizeSimilarity=0.999;PctRecOverlap=0.4093;SizeDiff=1;StartDistance=-573;EndDistance=-572;GTMatch=1;TruScore=79;MatchId=4114.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:13:50:1/1:3:15:4:21:./.:0:0:0:0:0/0:19:0:0/1:9:23:.:.:.
chr8	146042931	HG3_Ill_svaba_12698	GGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACTTGAGGTCAGGAGATAGAGACCATCCTGGCCAACATAGTAAAACCCCATCTCTACTAAAAAGACAAAAATTA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_9745:HG2_Ill_Krunchall_13832:HG2_PB_PB10Xdip_29743:HG3_PB_HySA_14977:HG2_PB_HySA_18018:HG4_PB_pbsv_10036:HG4_PB_SVrefine2Falcon1Dovetail_6168:HG4_Ill_svaba_12647:HG4_Ill_SVrefine2DISCOVARDovetail_7209:HG4_Ill_MetaSV_5484:HG4_10X_allpass_1937:HG3_PB_SVrefine2PBcRDovetail_4596:HG3_PB_SVrefine2Falcon1Dovetail_6137:HG3_Ill_svaba_12698:HG3_Ill_manta_2332:HG3_Ill_SVrefine2DISCOVARDovetail_7441:HG3_Ill_MetaSV_5442:HG3_CG_vcfBeta_5447:HG3_10X_allpass_2009:HG2_PB_pbsv_10014:HG2_PB_SVrefine2PBcRplusDovetail_11394:HG2_PB_SVrefine2PB10Xhap12_7294:HG2_PB_SVrefine2Falcon1plusDovetail_12188:HG2_Ill_svaba_12558:HG2_Ill_scalpel_9550:HG2_Ill_manta_2857:HG2_Ill_breakscan11_1453:HG2_Ill_SpiralSDKrefine_17505:HG2_Ill_MetaSV_5262:HG2_Ill_GATKHCSBGrefine_6797:HG2_10X_SVrefine210Xhap12_7163;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7163:HG2_Ill_GATKHCSBGrefine_6797:HG2_Ill_MetaSV_5262:HG2_Ill_SpiralSDKrefine_17505:HG2_Ill_breakscan11_1453:HG2_Ill_manta_2857:HG2_Ill_scalpel_9550:HG2_Ill_svaba_12558:HG2_PB_PB10Xdip_29743:HG4_PB_pbsv_10036:HG4_PB_SVrefine2Falcon1Dovetail_6168:HG4_Ill_svaba_12647:HG4_Ill_SVrefine2DISCOVARDovetail_7209:HG4_Ill_MetaSV_5484:HG4_10X_allpass_1937:HG3_PB_SVrefine2PBcRDovetail_4596:HG3_PB_SVrefine2Falcon1Dovetail_6137:HG3_Ill_svaba_12698:HG3_Ill_manta_2332:HG3_Ill_SVrefine2DISCOVARDovetail_7441:HG3_Ill_MetaSV_5442:HG3_CG_vcfBeta_5447:HG3_10X_allpass_2009:HG2_PB_pbsv_10014:HG2_PB_SVrefine2PBcRplusDovetail_11394:HG2_PB_SVrefine2PB10Xhap12_7294:HG2_PB_SVrefine2Falcon1plusDovetail_12188;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0147059;ClusterMaxSizeDiff=0.0147059;ClusterMaxEditDist=0.0296296;PBcalls=12;Illcalls=15;TenXcalls=3;CGcalls=1;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=1;HG2count=15;HG3count=10;HG4count=6;NumTechs=4;NumTechsExact=4;SVLEN=-135;DistBack=1999;DistForward=-132;DistMin=-132;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=66;REFWIDENED=8:146042932-146043132;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:28:1|0:1:29:16:3:./.:0:0:0:0:0/1:36:13:./.:.:.:.:.:.
chr8	146057021	HG4_10X_allpass_1939	AGCTGGGTGTGGTGGCGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCACGAGAATCGCTTGAACCCTGGAGGCGGAGCTTGCAGCGAGCTGAGATCGCACCACTGCAATCCGGCCTGGGCAACAGAGCGAGACTCCATCTAAAAAAAAAAAAAAAAAAGACTATCTTAGAATTTATAAAATATGGTAAGTACCAGGTTAGTTTTGTTTATTATAAATCACTTTTTCAGCCGGACATGGTGTTGCATGCCTGTAGTCCCAGCTACTGGGGAGAGCGAGGAGGGAGGATTGCCTGAGCCTGGAAGGTCAAGGTTGGAGTCAGCTATGATTGTGCCACTGCAGTCCAGCCTAGGCAACAGAGTGAGACCCTGTCTAAAAAAAAAATCTTCTCTGCTTCTTTTGTGTTTGTTAACTTTGTTAGGTCAGATTTTAATGTAATTACTGTGTTTTTGCCTTATGGATTGTCTCTTTGAAGTTTTATTTAAAAGTTCTGTCCGGGCACAGTGGCTCACACCTGTAATCCCAGCGCTTTGGGAGGCCAAGGCGGGCGGATTGCCTCAAATCAGGAGTTCAAGACCAGCCTGGGCAACACAGTGAAACCCTGTCTTTATTAAAATGCAAAAAAAAAAAAAAATTAGCTGGGCATGGCAGTGTACACCTGTAGTCCCAGCTAATTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCGGGATTGTGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCTATCTCCAAAAAAAAAAAAAGTTCTTCCCTG	A	20	PASS	ClusterIDs=HG3_PB_HySA_14978:HG4_PB_assemblyticsfalcon_26771:HG3_PB_assemblyticsfalcon_27263:HG4_Ill_Krunchall_14065:HG2_PB_HySA_18020:HG4_PB_pbsv_10038:HG4_PB_SVrefine2Falcon1Dovetail_6170:HG3_PB_SVrefine2Falcon1Dovetail_6139:HG2_Ill_tnscope_1143:HG4_Ill_SVrefine2DISCOVARDovetail_7210:HG4_Ill_MetaSV_5485:HG4_10X_allpass_1939:HG3_PB_pbsv_9747:HG3_PB_SVrefine2PBcRDovetail_4597:HG3_Ill_manta_2333:HG3_Ill_SVrefine2DISCOVARDovetail_7442:HG3_Ill_MetaSV_5443:HG3_Ill_GATKHCSBGrefine_6701:HG3_10X_allpass_2010:HG2_PB_pbsv_10016:HG2_PB_SVrefine2PBcRplusDovetail_11396:HG2_PB_SVrefine2PB10Xhap12_7296:HG2_PB_SVrefine2Falcon1plusDovetail_12190:HG2_Ill_SVrefine2DISCOVARplusDovetail_13331:HG2_Ill_MetaSV_5263:HG2_10X_allpass_1672:HG2_10X_SVrefine210Xhap12_7164;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7164:HG2_10X_allpass_1672:HG2_Ill_MetaSV_5263:HG2_Ill_SVrefine2DISCOVARplusDovetail_13331:HG2_PB_SVrefine2Falcon1plusDovetail_12190:HG2_PB_SVrefine2PB10Xhap12_7296:HG2_PB_SVrefine2PBcRplusDovetail_11396:HG2_PB_pbsv_10016:HG3_10X_allpass_2010:HG3_Ill_GATKHCSBGrefine_6701:HG3_Ill_MetaSV_5443:HG3_Ill_SVrefine2DISCOVARDovetail_7442:HG3_Ill_manta_2333:HG3_PB_SVrefine2PBcRDovetail_4597:HG3_PB_pbsv_9747:HG4_10X_allpass_1939:HG4_Ill_MetaSV_5485:HG4_Ill_SVrefine2DISCOVARDovetail_7210;NumExactMatchSVs=18;ClusterMaxShiftDist=0.121596;ClusterMaxSizeDiff=0.121596;ClusterMaxEditDist=0.121596;PBcalls=13;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-811;DistBack=6071;DistForward=-800;DistMin=-800;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=8:146057022-146057884;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4117.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:18:1|0:2:28:24:0:./.:0:0:0:0:0/1:41:20:0/1:55:15:.:.:.
chr8	146192868	HG2_PB_pbsv_10019	AACCTCCCAATGGAATAGGGTTTTAAAAAATTTCTGGCATATAAATTTTTTAAAATTCTTATGTACATTATATTTCTACTACATATCTCTCATTGTTATACTTGTTCTGAGAAAACTAATTCCGTGGTACTCCAAAGGCTAGAGATGATTCCACAAGTAATAACAGCTACAAATCAATGTCTTTGACAGGACTATTGGAAATGAACATTCCCAGTGACAAGGGACACCTTGACACTCATATTTTGATCATCAAAGCTTTCTAGAAGAAAGACTTTTTATCAAGAGGGGGAGATGAGAGAAAGCTTTT	A	20	PASS	ClusterIDs=HG2_PB_HySA_18029:HG4_Ill_Krunchall_14067:HG3_Ill_Krunchall_13521:HG2_Ill_Krunchall_13834:HG3_PB_HySA_14985:HG4_PB_pbsv_10040:HG4_PB_assemblyticsfalcon_26775:HG4_PB_SVrefine2Falcon1Dovetail_6172:HG4_Ill_scalpel_9295:HG4_Ill_manta_2436:HG4_Ill_SVrefine2DISCOVARDovetail_7211:HG4_Ill_GATKHCSBGrefine_6930:HG4_10X_allpass_1940:HG3_PB_assemblyticsfalcon_27270:HG3_PB_SVrefine2PBcRDovetail_4599:HG3_PB_SVrefine2Falcon1Dovetail_6143:HG3_Ill_manta_2334:HG3_Ill_GATKHCSBGrefine_6703:HG3_10X_allpass_2011:HG2_PB_pbsv_10019:HG2_PB_assemblyticsfalcon_27342:HG2_PB_assemblyticsPBcR_26608:HG2_PB_SVrefine2PBcRplusDovetail_11399:HG2_PB_SVrefine2PB10Xhap12_7300:HG2_PB_SVrefine2Falcon2Bionano_4723:HG2_PB_SVrefine2Falcon1plusDovetail_12193:HG2_Ill_scalpel_9552:HG2_Ill_manta_2858:HG2_Ill_SpiralSDKrefine_17507:HG2_Ill_SVrefine2DISCOVARplusDovetail_13332:HG2_Ill_GATKHCSBGrefine_6799:HG2_10X_allpass_1673:HG2_10X_SVrefine210Xhap12_7166:HG4_Ill_MetaSV_5487:HG2_Ill_tnscope_1144:HG2_Ill_Spiral_711:HG2_Ill_MetaSV_5264:HG3_PB_pbsv_9751;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7166:HG2_10X_allpass_1673:HG2_Ill_GATKHCSBGrefine_6799:HG2_Ill_SVrefine2DISCOVARplusDovetail_13332:HG2_Ill_SpiralSDKrefine_17507:HG2_Ill_manta_2858:HG2_Ill_scalpel_9552:HG2_PB_SVrefine2Falcon1plusDovetail_12193:HG2_PB_SVrefine2Falcon2Bionano_4723:HG2_PB_SVrefine2PB10Xhap12_7300:HG2_PB_SVrefine2PBcRplusDovetail_11399:HG2_PB_assemblyticsPBcR_26608:HG2_PB_assemblyticsfalcon_27342:HG2_PB_pbsv_10019:HG3_10X_allpass_2011:HG3_Ill_GATKHCSBGrefine_6703:HG3_Ill_manta_2334:HG3_PB_SVrefine2Falcon1Dovetail_6143:HG3_PB_SVrefine2PBcRDovetail_4599:HG3_PB_assemblyticsfalcon_27270:HG4_10X_allpass_1940:HG4_Ill_GATKHCSBGrefine_6930:HG4_Ill_SVrefine2DISCOVARDovetail_7211:HG4_Ill_manta_2436:HG4_Ill_scalpel_9295:HG4_PB_SVrefine2Falcon1Dovetail_6172:HG4_PB_assemblyticsfalcon_26775:HG4_PB_pbsv_10040;NumExactMatchSVs=28;ClusterMaxShiftDist=0.00972447;ClusterMaxSizeDiff=0.00972447;ClusterMaxEditDist=0.0259319;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=13;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=-762;DistForward=-307;DistMin=-762;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=8:146192869-146193175;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:6:23:2:32:./.:0:0:0:0:1/1:0:53:./.:2:15:.:.:.
chr9	469390	HG4_Ill_manta_2437	CCGGGTAGAAGAAAGAAAGGGTATCAGTGGAACTGAGAGTGTATACAGTGGCGCCTGAAAGCGGGTAGAAGAAAGAAAGGGTATCAGTGGAACTGAGAGTGTATACAGTGGCGCCTGAAAGCGGGTAGAAGAAAGAAAGGGTATCAGTGGAACTGAGAGTGTATACAGTGGCGCCTGAAAG	C	20	PASS	ClusterIDs=HG4_Ill_MetaSV_5490:HG2_Ill_Krunchall_13838:HG2_Ill_Spiral_712:HG4_PB_pbsv_10047:HG2_PB_pbsv_10024:HG3_PB_pbsv_9757:HG4_PB_HySA_14539:HG2_PB_HySA_18043:HG4_PB_SVrefine2PBcRDovetail_5013:HG4_Ill_manta_2437:HG4_Ill_SVrefine2DISCOVARDovetail_7213:HG4_Ill_GATKHCSBGrefine_6933:HG4_Ill_250bpfermikitraw_13421:HG4_Ill_150bpfermikitraw_12862:HG4_10X_allpass_1942:HG3_Ill_manta_2336:HG3_Ill_GATKHCSBGrefine_6707:HG2_PB_assemblyticsfalcon_27350:HG2_PB_SVrefine2PB10Xhap12_7310:HG2_PB_SVrefine2Falcon2Bionano_4727:HG2_PB_SVrefine2Falcon1plusDovetail_12199:HG2_Ill_manta_2860:HG2_Ill_SpiralSDKrefine_17514:HG2_Ill_SVrefine2DISCOVARplusDovetail_13337:HG2_Ill_MetaSV_5266:HG2_Ill_GATKHCSBGrefine_6804:HG2_10X_allpass_1675:HG2_10X_SVrefine210Xhap12_7169;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7169:HG2_10X_allpass_1675:HG2_Ill_GATKHCSBGrefine_6804:HG2_Ill_MetaSV_5266:HG2_Ill_SVrefine2DISCOVARplusDovetail_13337:HG2_Ill_SpiralSDKrefine_17514:HG2_Ill_manta_2860:HG2_PB_SVrefine2Falcon1plusDovetail_12199:HG2_PB_SVrefine2Falcon2Bionano_4727:HG2_PB_SVrefine2PB10Xhap12_7310:HG2_PB_assemblyticsfalcon_27350:HG3_Ill_GATKHCSBGrefine_6707:HG3_Ill_manta_2336:HG4_10X_allpass_1942:HG4_Ill_150bpfermikitraw_12862:HG4_Ill_250bpfermikitraw_13421:HG4_Ill_GATKHCSBGrefine_6933:HG4_Ill_SVrefine2DISCOVARDovetail_7213:HG4_Ill_manta_2437:HG4_PB_SVrefine2PBcRDovetail_5013;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0110497;ClusterMaxSizeDiff=0.0110497;ClusterMaxEditDist=0.0111111;PBcalls=10;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=3;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-180;DistBack=53697;DistForward=-123;DistMin=-123;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=59;REFWIDENED=9:469391-469629;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:1/1:5:25:1:19:./.:0:0:0:0:1/1:0:44:./.:.:.:.:.:.
chr9	3780616	HG4_Ill_SVrefine2DISCOVARDovetail_7227	TAAAGATATAAAAAATGATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1454:HG4_PB_pbsv_10071:HG4_Ill_Krunchall_14094:HG3_Ill_Krunchall_13546:HG2_Ill_Krunchall_13860:HG3_PB_assemblyticsfalcon_27317:HG2_PB_assemblyticsfalcon_27383:HG4_PB_assemblyticsfalcon_26825:HG2_PB_assemblyticsPBcR_26647:HG2_PB_pbsv_10048:HG2_PB_HySA_18089:HG4_Ill_MetaSV_5500:HG3_Ill_MetaSV_5456:HG2_Ill_tnscope_1146:HG2_Ill_MetaSV_5272:HG4_PB_SVrefine2PBcRDovetail_5028:HG4_Ill_scalpel_9317:HG4_Ill_manta_2443:HG4_Ill_SVrefine2DISCOVARDovetail_7227:HG4_Ill_GATKHCSBGrefine_6947:HG4_10X_allpass_1944:HG3_PB_pbsv_9780:HG3_PB_SVrefine2PBcRDovetail_4617:HG3_Ill_scalpel_9693:HG3_Ill_manta_2342:HG3_Ill_SVrefine2DISCOVARDovetail_7459:HG3_Ill_GATKHCSBGrefine_6720:HG3_10X_allpass_2016:HG2_PB_SVrefine2PBcRplusDovetail_11420:HG2_PB_SVrefine2PB10Xhap12_7329:HG2_PB_SVrefine2Falcon2Bionano_4743:HG2_PB_SVrefine2Falcon1plusDovetail_12217:HG2_Ill_scalpel_9578:HG2_Ill_manta_2868:HG2_Ill_SVrefine2DISCOVARplusDovetail_13354:HG2_Ill_GATKHCSBGrefine_6820:HG2_10X_allpass_1677:HG2_10X_SVrefine210Xhap12_7183;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7183:HG2_10X_allpass_1677:HG2_Ill_GATKHCSBGrefine_6820:HG2_Ill_SVrefine2DISCOVARplusDovetail_13354:HG2_Ill_manta_2868:HG2_Ill_scalpel_9578:HG2_PB_SVrefine2Falcon1plusDovetail_12217:HG2_PB_SVrefine2Falcon2Bionano_4743:HG2_PB_SVrefine2PB10Xhap12_7329:HG2_PB_SVrefine2PBcRplusDovetail_11420:HG3_10X_allpass_2016:HG3_Ill_GATKHCSBGrefine_6720:HG3_Ill_SVrefine2DISCOVARDovetail_7459:HG3_Ill_manta_2342:HG3_Ill_scalpel_9693:HG3_PB_SVrefine2PBcRDovetail_4617:HG3_PB_pbsv_9780:HG4_10X_allpass_1944:HG4_Ill_GATKHCSBGrefine_6947:HG4_Ill_SVrefine2DISCOVARDovetail_7227:HG4_Ill_manta_2443:HG4_Ill_scalpel_9317:HG4_PB_SVrefine2PBcRDovetail_5028;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0970266;ClusterMaxSizeDiff=0.0970266;ClusterMaxEditDist=0.0970266;PBcalls=14;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=90101;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=9:3780617-3780958;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:1/1:0:10:0:19:./.:0:0:0:0:1/1:0:36:./.:1:9:.:.:.
chr9	4376417	HG3_10X_allpass_2018	ATATGCTCTCTTTCTAAACACAAGAGCAACAGAAGAAACCACAAAGGAAAGACTGACATATTTCTATTTATGTTTAAACTTTATAAGCCAAGTGTCCAAACACAAAGCTAAAAGACAAGCAAACCTGACTTTTGTAAGTCATTAGCAAGTCACGAAAATAGAAGTCATGTAGGTAGTTGGTTCCGTCCTAATATGCCAGTGGGTACTAATGTAAATATACATCTTATAAAAGAAGAAATATAACTTTTTCACCCTGACAAAAAAGAAAGCTCAACCTATTGTAATCAAATAAATATAACAAAAACTATTAGATACTATTTTTAACCTATCAAATATGAGAAAAAAGTTTTAATGAGAATACTCAATGCTGAAAAGGCTACACTGAGATACTCCTGTGTTCTGGTGGGAGAGTATACAGGCACAGTCTTTGCAGAAGGTGACTTTGCAATATGCATCAGGATGCTTGCAAATGCGCGTGTTCTTTGAGCCACTGATTCCACTGCTGGAGGCTGATTAGTGCAATGGCAAAGGATGCAGGCTCTGAGCCAGACCACCTGAGATTGCCTCCCAGCCCCACCACTTACTAGCCCAATAACTTGGCAGAAAATTCCCTGACCCCTTTGTGCCTCAAAGTCCTGATCTGTAACACAGGGTTTGTGACGGTTAATATTAGGTGTCAAATTGATTGAAGGATGCCTAGATAGCTGGTAAAGCATTGTTTCTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGACTGACATTTGAGTCAGAGGACTGGTAGAGGAAGACCCATCCTCGATGTGGGTGGCCACCATCCAACTGGCTGCCAGCGCATCTGGAACAAAGCAGGAGGAAGAAGGTGGGATAAGCTGGCTTGCTGAGTCTCCTGGCTTTCATCTTTCTCCCATGCTGGATGCTTCCTTCCATTCCTCCCACCCTAGGACATCAGACTCCAGGTTCTTTGGCTTTTGGAATCTTGGAGTTACACCAGTTGTTTGCTGGGGGCTCTCAGGCCTTTGGCCACAGCCTTCCCTGCTTTGGACTGAGCCACTACTGGCTTCTTTCTTCCTCAGCTTACAGACGGCCTATCGTGGGATTTCACCTTGTGATCCTGTGAGCCAGTTCCCTTTCATATATACATATATCCTGCTAGTTCTGTCCCTCCGGAGAACCCTAATACAGGGTAATAATGCTATCTTATTTCGCAAAGTAGTGTGAAGATTCTAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_10054:HG2_10X_allpass_1679:HG4_10X_allpass_1946:HG3_PB_pbsv_9785:HG4_PB_assemblyticsfalcon_26838:HG2_PB_assemblyticsPBcR_26657:HG3_PB_assemblyticsfalcon_27329:HG2_PB_assemblyticsfalcon_27395:HG4_Ill_Krunchall_14109:HG3_Ill_Krunchall_13558:HG2_Ill_Krunchall_13871:HG2_Ill_tnscope_1148:HG4_Ill_MetaSV_5503:HG4_Ill_GATKHCSBGrefine_6950:HG3_Ill_MetaSV_5458:HG3_Ill_GATKHCSBGrefine_6723:HG3_10X_allpass_2018:HG2_Ill_breakscan11_1456:HG2_Ill_SpiralSDKrefine_17539:HG2_Ill_MetaSV_5275:HG2_Ill_GATKHCSBGrefine_6823:HG4_PB_pbsv_10076:HG4_PB_SVrefine2PBcRDovetail_5033:HG3_PB_SVrefine2PBcRDovetail_4622:HG3_Ill_SVrefine2DISCOVARDovetail_7461:HG2_PB_SVrefine2PBcRplusDovetail_11425:HG2_PB_SVrefine2PB10Xhap12_7334:HG2_PB_SVrefine2Falcon2Bionano_4748:HG2_PB_SVrefine2Falcon1plusDovetail_12222:HG2_Ill_SVrefine2DISCOVARplusDovetail_13359:HG2_10X_SVrefine210Xhap12_7187;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6823:HG2_Ill_MetaSV_5275:HG2_Ill_SpiralSDKrefine_17539:HG2_Ill_breakscan11_1456:HG3_10X_allpass_2018:HG3_Ill_GATKHCSBGrefine_6723:HG3_Ill_MetaSV_5458:HG4_Ill_GATKHCSBGrefine_6950:HG4_Ill_MetaSV_5503;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0196399;ClusterMaxSizeDiff=0.0196399;ClusterMaxEditDist=0.0196399;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-1227;DistBack=29745;DistForward=-1226;DistMin=-1226;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=9:4376410-4377648;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:41:1|0:3:43:23:1:./.:0:0:0:0:0/1:56:19:0/1:93:53:1312:.:.
chr9	4537262	HG2_PB_SVrefine2Falcon1plusDovetail_12223	TAAAAAAATCACATGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCACAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAATAAAATAAAATAAAATAAAATAAAATAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7189:HG3_Ill_Krunchall_13560:HG2_PB_pbsv_10055:HG3_PB_SVrefine2Falcon1Dovetail_6155:HG3_PB_pbsv_9786:HG3_Ill_MetaSV_5459:HG2_Ill_tnscope_1149:HG2_Ill_MetaSV_5276:HG3_Ill_manta_2344:HG3_Ill_GATKHCSBGrefine_6724:HG3_10X_allpass_2019:HG2_PB_SVrefine2PB10Xhap12_7336:HG2_PB_SVrefine2Falcon2Bionano_4749:HG2_PB_SVrefine2Falcon1plusDovetail_12223:HG2_Ill_manta_2871:HG2_Ill_breakscan11_1457:HG2_Ill_GATKHCSBGrefine_6824:HG2_10X_allpass_1680;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7189:HG3_Ill_manta_2344:HG3_Ill_GATKHCSBGrefine_6724:HG3_10X_allpass_2019:HG2_PB_SVrefine2PB10Xhap12_7336:HG2_PB_SVrefine2Falcon2Bionano_4749:HG2_PB_SVrefine2Falcon1plusDovetail_12223:HG2_Ill_manta_2871:HG2_Ill_breakscan11_1457:HG2_Ill_GATKHCSBGrefine_6824:HG2_10X_allpass_1680;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00581395;ClusterMaxSizeDiff=0.00581395;ClusterMaxEditDist=0.00582242;PBcalls=6;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-343;DistBack=75862;DistForward=-328;DistMin=-328;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=9:4537263-4537620;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4123.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:15:0|1:31:1:0:21:./.:0:0:0:0:0/1:48:17:0/1:51:10:.:.:.
chr9	5441973	HG2_Ill_svaba_12611	CGTGTGTATATACACACGTATATACATGTGTGTATATACATGTGTGTATATACACACGTATAT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_9791:HG4_Ill_manta_2446:HG4_PB_HySA_14596:HG3_Ill_manta_2345:HG4_Ill_GATKHC_16243:HG4_Ill_GATKHCSBGrefine_6951:HG3_Ill_GATKHC_16174:HG3_Ill_GATKHCSBGrefine_6725:HG2_Ill_GATKHC_16225:HG2_Ill_GATKHCSBGrefine_6825:HG2_Ill_SpiralSDKrefine_17543:HG2_PB_HySA_18112:HG4_PB_pbsv_10081:HG4_Ill_svaba_12697:HG4_Ill_Krunchall_14117:HG3_Ill_svaba_12743:HG3_Ill_Krunchall_13565:HG2_Ill_svaba_12611:HG2_Ill_Krunchall_13876:HG2_Ill_250bpfermikitraw_13573:HG2_Ill_150bpfermikitraw_12744:HG2_PB_assemblyticsPBcR_26662:HG3_PB_assemblyticsfalcon_27336:HG2_PB_assemblyticsfalcon_27400:HG2_PB_pbsv_10059;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12744:HG2_Ill_250bpfermikitraw_13573:HG2_Ill_Krunchall_13876:HG2_Ill_svaba_12611:HG3_Ill_Krunchall_13565:HG3_Ill_svaba_12743:HG4_Ill_Krunchall_14117:HG4_Ill_svaba_12697:HG4_PB_pbsv_10081;NumExactMatchSVs=9;ClusterMaxShiftDist=0.272727;ClusterMaxSizeDiff=0.272727;ClusterMaxEditDist=0.297521;PBcalls=8;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=18103;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=9:5441940-5442076;PctSeqSimilarity=0.9808;PctSizeSimilarity=1;PctRecOverlap=0.9683;SizeDiff=0;StartDistance=-2;EndDistance=-2;GTMatch=0;TruScore=98;MatchId=4124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:45:1/1:1:17:0:11:./.:0:0:0:0:1/1:0:51:./.:.:.:.:.:.
chr9	6888773	HG2_Ill_scalpel_9589	TCTTCTGTGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCCGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7351:HG4_PB_HySA_14611:HG2_PB_assemblyticsfalcon_27410:HG2_PB_assemblyticsPBcR_26675:HG4_Ill_Krunchall_14123:HG3_Ill_Krunchall_13573:HG3_PB_assemblyticsfalcon_27349:HG4_PB_assemblyticsfalcon_26861:HG4_PB_SVrefine2Falcon1Dovetail_6190:HG4_PB_pbsv_10092:HG2_PB_PB10Xdip_31431:HG4_Ill_MetaSV_5506:HG2_Ill_tnscope_1151:HG4_PB_SVrefine2PBcRDovetail_5044:HG4_Ill_scalpel_9331:HG4_Ill_manta_2448:HG4_Ill_SVrefine2DISCOVARDovetail_7248:HG4_Ill_GATKHCSBGrefine_6960:HG4_10X_allpass_1948:HG3_PB_pbsv_9805:HG3_PB_SVrefine2Falcon1Dovetail_6158:HG3_Ill_SVrefine2DISCOVARDovetail_7471:HG3_Ill_GATKHCSBGrefine_6731:HG2_PB_pbsv_10072:HG2_PB_SVrefine2PBcRplusDovetail_11438:HG2_PB_SVrefine2PB10Xhap12_7352:HG2_PB_SVrefine2Falcon1plusDovetail_12234:HG2_Ill_scalpel_9589:HG2_Ill_manta_2875:HG2_Ill_SVrefine2DISCOVARplusDovetail_13370:HG2_Ill_GATKHCSBGrefine_6828:HG2_10X_allpass_1682:HG2_10X_SVrefine210Xhap12_7198:HG4_Ill_Spiral_827:HG3_Ill_Spiral_10600:HG2_Ill_breakscan11_1459;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7198:HG2_10X_allpass_1682:HG2_Ill_GATKHCSBGrefine_6828:HG2_Ill_SVrefine2DISCOVARplusDovetail_13370:HG2_Ill_manta_2875:HG2_Ill_scalpel_9589:HG2_PB_SVrefine2Falcon1plusDovetail_12234:HG2_PB_SVrefine2PB10Xhap12_7352:HG2_PB_SVrefine2PBcRplusDovetail_11438:HG2_PB_pbsv_10072:HG3_Ill_GATKHCSBGrefine_6731:HG3_Ill_SVrefine2DISCOVARDovetail_7471:HG3_PB_SVrefine2Falcon1Dovetail_6158:HG3_PB_pbsv_9805:HG4_10X_allpass_1948:HG4_Ill_GATKHCSBGrefine_6960:HG4_Ill_SVrefine2DISCOVARDovetail_7248:HG4_Ill_manta_2448:HG4_Ill_scalpel_9331:HG4_PB_SVrefine2PBcRDovetail_5044;NumExactMatchSVs=20;ClusterMaxShiftDist=0.114192;ClusterMaxSizeDiff=0.114192;ClusterMaxEditDist=0.135385;PBcalls=16;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=80686;DistForward=-315;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=9:6888774-6889105;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4125.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:35:0|1:31:0:2:32:./.:0:0:0:0:0/1:23:11:0/1:25:8:.:.:.
chr9	6999377	HG2_PB_SVrefine2PBcRplusDovetail_11439	TAAAAACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTGGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_14125:HG3_PB_HySA_15045:HG3_Ill_Krunchall_13574:HG2_Ill_Krunchall_13884:HG2_PB_assemblyticsPBcR_26676:HG4_PB_assemblyticsfalcon_26862:HG3_PB_assemblyticsfalcon_27350:HG2_PB_assemblyticsfalcon_27411:HG4_Ill_MetaSV_5507:HG3_Ill_MetaSV_5467:HG2_PB_HySA_18131:HG2_Ill_tnscope_1152:HG2_Ill_MetaSV_5280:HG4_PB_SVrefine2PBcRDovetail_5045:HG4_PB_SVrefine2Falcon1Dovetail_6191:HG4_Ill_scalpel_9333:HG4_Ill_manta_2449:HG4_Ill_SVrefine2DISCOVARDovetail_7249:HG4_Ill_GATKHCSBGrefine_6961:HG4_10X_allpass_1949:HG3_PB_pbsv_9806:HG3_PB_SVrefine2PBcRDovetail_4630:HG3_Ill_scalpel_9707:HG3_Ill_manta_2347:HG3_Ill_SVrefine2DISCOVARDovetail_7472:HG3_Ill_GATKHCSBGrefine_6732:HG3_10X_allpass_2023:HG2_PB_SVrefine2PBcRplusDovetail_11439:HG2_PB_SVrefine2PB10Xhap12_7353:HG2_PB_SVrefine2Falcon2Bionano_4761:HG2_PB_SVrefine2Falcon1plusDovetail_12235:HG2_Ill_scalpel_9590:HG2_Ill_manta_2876:HG2_Ill_SpiralSDKrefine_17550:HG2_Ill_SVrefine2DISCOVARplusDovetail_13371:HG2_Ill_GATKHCSBGrefine_6829:HG2_10X_allpass_1683:HG2_10X_SVrefine210Xhap12_7199:HG4_PB_pbsv_10093:HG3_Ill_Spiral_10601:HG2_Ill_Spiral_714:HG2_PB_pbsv_10073;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7199:HG2_10X_allpass_1683:HG2_Ill_GATKHCSBGrefine_6829:HG2_Ill_SVrefine2DISCOVARplusDovetail_13371:HG2_Ill_SpiralSDKrefine_17550:HG2_Ill_manta_2876:HG2_Ill_scalpel_9590:HG2_PB_SVrefine2Falcon1plusDovetail_12235:HG2_PB_SVrefine2Falcon2Bionano_4761:HG2_PB_SVrefine2PB10Xhap12_7353:HG2_PB_SVrefine2PBcRplusDovetail_11439:HG3_10X_allpass_2023:HG3_Ill_GATKHCSBGrefine_6732:HG3_Ill_SVrefine2DISCOVARDovetail_7472:HG3_Ill_manta_2347:HG3_Ill_scalpel_9707:HG3_PB_SVrefine2PBcRDovetail_4630:HG3_PB_pbsv_9806:HG4_10X_allpass_1949:HG4_Ill_GATKHCSBGrefine_6961:HG4_Ill_SVrefine2DISCOVARDovetail_7249:HG4_Ill_manta_2449:HG4_Ill_scalpel_9333:HG4_PB_SVrefine2Falcon1Dovetail_6191:HG4_PB_SVrefine2PBcRDovetail_5045;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0425532;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.0853859;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=80129;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=9:6999378-6999691;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:1:37:0:36:./.:0:0:0:0:1/1:0:50:0/1:3:10:.:.:.
chr9	7367099	HG2_PB_SVrefine2PBcRplusDovetail_11440	TGGGAGGCTGAGTCGGGTGGATCACTGAGGTCAGGAGTTTGAGACCAGCCTGACCAACATAGTGAGACCCTGTCTCTACTAAAAATACAAAAATTTAGCCAGGTGTGGTGGTGCGTGCCTGCGGTCCCAGCTGCTC	T	20	PASS	ClusterIDs=HG2_10X_allpass_1684:HG2_Ill_Krunchall_13890:HG4_PB_HySA_14618:HG2_PB_HySA_18139:HG4_PB_pbsv_10095:HG2_PB_pbsv_10075:HG4_Ill_GATKHC_16258:HG2_PB_SVrefine2PB10Xhap12_7356:HG2_PB_PB10Xdip_31433:HG4_Ill_GATKHCSBGrefine_6962:HG2_Ill_GATKHC_16238:HG2_Ill_GATKHCSBGrefine_6830:HG2_Ill_SpiralSDKrefine_17554:HG2_10X_SVrefine210Xhap12_7200:HG2_PB_SVrefine2PBcRplusDovetail_11440:HG2_PB_SVrefine2PB10Xhap12_7355:HG2_PB_SVrefine2Falcon1plusDovetail_12237;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_1684:HG2_PB_SVrefine2PBcRplusDovetail_11440:HG2_PB_SVrefine2PB10Xhap12_7355:HG2_PB_SVrefine2Falcon1plusDovetail_12237;NumExactMatchSVs=4;ClusterMaxShiftDist=0.238095;ClusterMaxSizeDiff=0.238095;ClusterMaxEditDist=0.256;PBcalls=9;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-135;DistBack=34190;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=146;REFWIDENED=9:7367100-7367380;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4127.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:21:0|1:35:4:3:16:./.:0:0:0:0:0/1:29:22:./.:.:.:.:.:.
chr9	8848769	HG2_PB_SVrefine2Falcon1plusDovetail_12238	TTGACCCTATGTTCCATCTTTATTACTTTTATCTATGCAACCTTGGGCAAATTACTTAATCTCTCCATGGATCAACCCTCTTCTGTGAAATGATGATAATAAAACCATCTGACTTACACAGAATGTTATTTTAGACATTAAACATAATACTAAAGGTGAGGTACTGAGCAGAATGCCTGGCATATAATAAATGCTCAGTAAGTTTTAGAAATAATCACTATTACAACTATTACA	T	20	PASS	ClusterIDs=HG2_PB_HySA_18151:HG2_PB_pbsv_10080:HG4_PB_pbsv_10101:HG4_PB_SVrefine2PBcRDovetail_5049:HG4_Ill_manta_2454:HG4_Ill_GATKHCSBGrefine_6967:HG4_10X_allpass_1951:HG3_PB_assemblyticsfalcon_27367:HG3_PB_SVrefine2Falcon1Dovetail_6160:HG2_PB_assemblyticsfalcon_27424:HG2_PB_assemblyticsPBcR_26689:HG2_PB_SVrefine2PBcRplusDovetail_11442:HG2_PB_SVrefine2PB10Xhap12_7359:HG2_PB_SVrefine2Falcon1plusDovetail_12238:HG2_Ill_breakscan11_1460:HG2_Ill_SpiralSDKrefine_17567:HG2_Ill_SVrefine2DISCOVARplusDovetail_13379:HG2_Ill_MetaSV_5283:HG2_Ill_GATKHCSBGrefine_6834:HG2_10X_allpass_1685:HG2_10X_SVrefine210Xhap12_7203:HG2_Ill_Krunchall_13904:HG4_PB_HySA_14624:HG4_Ill_MetaSV_5510;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7203:HG2_10X_allpass_1685:HG2_Ill_GATKHCSBGrefine_6834:HG2_Ill_MetaSV_5283:HG2_Ill_SVrefine2DISCOVARplusDovetail_13379:HG2_Ill_SpiralSDKrefine_17567:HG2_Ill_breakscan11_1460:HG2_PB_SVrefine2Falcon1plusDovetail_12238:HG2_PB_SVrefine2PB10Xhap12_7359:HG2_PB_SVrefine2PBcRplusDovetail_11442:HG2_PB_assemblyticsPBcR_26689:HG2_PB_assemblyticsfalcon_27424:HG3_PB_SVrefine2Falcon1Dovetail_6160:HG3_PB_assemblyticsfalcon_27367:HG4_10X_allpass_1951:HG4_Ill_GATKHCSBGrefine_6967:HG4_Ill_manta_2454:HG4_PB_SVrefine2PBcRDovetail_5049:HG4_PB_pbsv_10101;NumExactMatchSVs=19;ClusterMaxShiftDist=0.012848;ClusterMaxSizeDiff=0.012848;ClusterMaxEditDist=0.012848;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-233;DistBack=16338;DistForward=45338;DistMin=16338;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:8848770-8849003;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:36:1|0:4:34:38:1:./.:0:0:0:0:0/1:41:11:./.:.:.:.:.:.
chr9	9833575	HG4_Ill_svaba_12713	TTATTAGGCGGGAATTTCCTCTTCCTAATAAGCGTGGGAGTGCTATGGGAGACTGGAGTTTATTTCACCTCTGCAGTCTCAACCA	T	20	PASS	ClusterIDs=HG2_CG_vcfBeta_5751:HG2_PB_PB10Xdip_31786:HG4_PB_HySA_14629:HG4_PB_pbsv_10105:HG4_PB_assemblyticsfalcon_26883:HG4_Ill_svaba_12713:HG4_Ill_scalpel_9344:HG4_Ill_Krunchall_14141:HG4_Ill_GATKHC_16273:HG4_Ill_GATKHCSBGrefine_6969:HG4_Ill_250bpfermikitraw_13490:HG4_Ill_150bpfermikitraw_12922:HG4_CG_vcfBeta_6459:HG4_10X_allpass_1952:HG2_PB_pbsv_10083:HG2_PB_HySA_18160:HG2_Ill_svaba_12636:HG2_Ill_scalpel_9605:HG2_Ill_Krunchall_13911:HG2_Ill_GATKHC_16261:HG2_Ill_GATKHCSBGrefine_6836:HG2_Ill_250bpfermikitraw_13602;NumClusterSVs=22;ExactMatchIDs=HG2_CG_vcfBeta_5751:HG4_PB_pbsv_10105:HG4_PB_assemblyticsfalcon_26883:HG4_Ill_svaba_12713:HG4_Ill_scalpel_9344:HG4_Ill_Krunchall_14141:HG4_Ill_GATKHC_16273:HG4_Ill_GATKHCSBGrefine_6969:HG4_Ill_250bpfermikitraw_13490:HG4_Ill_150bpfermikitraw_12922:HG4_CG_vcfBeta_6459:HG4_10X_allpass_1952:HG2_PB_pbsv_10083:HG2_PB_HySA_18160:HG2_Ill_svaba_12636:HG2_Ill_scalpel_9605:HG2_Ill_Krunchall_13911:HG2_Ill_GATKHC_16261:HG2_Ill_GATKHCSBGrefine_6836:HG2_Ill_250bpfermikitraw_13602;NumExactMatchSVs=20;ClusterMaxShiftDist=0.2;ClusterMaxSizeDiff=0.2;ClusterMaxEditDist=0.2;PBcalls=6;Illcalls=13;TenXcalls=1;CGcalls=2;PBexactcalls=4;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=2;HG2count=10;HG3count=0;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-84;DistBack=39061;DistForward=11358;DistMin=11358;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=9:9833576-9833661;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4129.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:23:7:7:22:./.:0:0:0:0:0/1:25:19:./.:.:.:.:.:.
chr9	9950428	HG3_Ill_manta_2350	TAAGAAGAAAGTGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGTGGACGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_715:HG2_10X_allpass_1686:HG4_PB_HySA_14632:HG4_PB_assemblyticsfalcon_26886:HG3_PB_assemblyticsfalcon_27373:HG2_PB_assemblyticsfalcon_27430:HG4_Ill_Krunchall_14145:HG2_Ill_Krunchall_13915:HG4_Ill_MetaSV_5512:HG3_Ill_MetaSV_5470:HG2_Ill_MetaSV_5285:HG4_PB_pbsv_10107:HG4_PB_SVrefine2PBcRDovetail_5053:HG4_PB_SVrefine2Falcon1Dovetail_6196:HG4_Ill_scalpel_9348:HG4_Ill_SVrefine2DISCOVARDovetail_7264:HG4_Ill_GATKHCSBGrefine_6970:HG4_10X_allpass_1953:HG3_PB_SVrefine2PBcRDovetail_4634:HG3_Ill_scalpel_9725:HG3_Ill_manta_2350:HG3_Ill_SVrefine2DISCOVARDovetail_7483:HG3_Ill_GATKHCSBGrefine_6735:HG3_10X_allpass_2024:HG2_PB_pbsv_10085:HG2_PB_SVrefine2PB10Xhap12_7363:HG2_PB_SVrefine2Falcon2Bionano_4766:HG2_PB_SVrefine2Falcon1plusDovetail_12241:HG2_Ill_scalpel_9609:HG2_Ill_manta_2880:HG2_Ill_breakscan11_1461:HG2_Ill_SVrefine2DISCOVARplusDovetail_13384:HG2_Ill_GATKHCSBGrefine_6837:HG2_10X_SVrefine210Xhap12_7205:HG3_PB_pbsv_9814:HG4_Ill_Spiral_828:HG3_Ill_Spiral_10623;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7205:HG2_Ill_GATKHCSBGrefine_6837:HG2_Ill_SVrefine2DISCOVARplusDovetail_13384:HG2_Ill_breakscan11_1461:HG2_Ill_manta_2880:HG2_Ill_scalpel_9609:HG2_PB_SVrefine2Falcon1plusDovetail_12241:HG2_PB_SVrefine2Falcon2Bionano_4766:HG2_PB_SVrefine2PB10Xhap12_7363:HG2_PB_pbsv_10085:HG3_10X_allpass_2024:HG3_Ill_GATKHCSBGrefine_6735:HG3_Ill_SVrefine2DISCOVARDovetail_7483:HG3_Ill_manta_2350:HG3_Ill_scalpel_9725:HG3_PB_SVrefine2PBcRDovetail_4634:HG4_10X_allpass_1953:HG4_Ill_GATKHCSBGrefine_6970:HG4_Ill_SVrefine2DISCOVARDovetail_7264:HG4_Ill_scalpel_9348:HG4_PB_SVrefine2Falcon1Dovetail_6196:HG4_PB_SVrefine2PBcRDovetail_5053:HG4_PB_pbsv_10107;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0830769;ClusterMaxSizeDiff=0.0830769;ClusterMaxEditDist=0.0830769;PBcalls=13;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=-882;DistForward=-326;DistMin=-882;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=9:9950429-9950772;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:23:0|1:32:1:1:24:./.:0:0:0:0:0/1:26:24:0/1:15:8:.:.:.
chr9	10020266	HG3_Ill_SVrefine2DISCOVARDovetail_7485	CTAGCTTAGGTGTATATCAATACAATATTAGTTTCTTTTTCTTTTTCTTTTTTCTTTGACGGAGTCTTGCTCTGTCACCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCGACCTCCACTTCTCGGGTTCAAGCGATTCTCTTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGTGCCGCCATCACACCCAGCTAATTTTTGTTTTTTTAGTAGAGACGGGGTTTCACCACGTTGCCCAGGATGGTCTAGATGGCTTGACTTCATGATCCTTTTTCACATTTATTATGCCACTAGAATATTCTTAGAAATACATGCTAGCCACTTAATATCAATGTGACTGGAAAATCCTATAATTCTCATCATCCCTGCCCACTTATGAATCCCTTGCTTCATCTGAAAACTCTTACTCATCCTCTGTACGGCAAACATTACCTTCTCTGTGAAGATTTGCTAGACTTATACACACCAGTATGGTTGTTCTAAACTCTGTAAAAACACAATTGTGTAGATCACTTACGTTAAACATTTCTGGTTGCTCATCAACAGCCAACCGACTCCCACATACATACACTTGCATTCCCTTCTAATAGATCTGCCTTCCATCATAGAATATGAAAATGTGAGATGCTTGATCTTGTAATGCTGCTTTCAAATGTGGTCAGTGGCACTTAAGAGAGCCTGCCTGTACATTTCTGTAGAAGGTGTTCAGGCATGAGAAAATCAAAGCCTTTGAAGCAGTCATCTTGCAGTCACCTTGTGACCGTGGGTAAATAAACCCAAGAACGGAAATCCGAGGAAAGCAGAGTTACATACAATTAGGACTTTTCCTGAATCCTCCATGACATGTGTGTCACAGGAATAACCAAACCTGGAAATTTGAACTTTCTTCCTTGTTATGTTCGATGATAAACCCCTCTAACATAAGGCAGTTTGGGTCTCATATCTGTTACTTATTTCTGATACACTGCTCTCATACATACCTTTCTAATTTATTGGCACACACAGTGAGCAATGAATAAATGTTTGTTGAATGAAAGCAACAGAGAATCACTTTCCCTTTCATATTCAGGTGCTACCCCACAAGATTATTAGTATTAGGTTGATGCAAAAGTAATCACGGTG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7206:HG4_PB_pbsv_10109:HG2_PB_pbsv_10086:HG3_PB_pbsv_9815:HG4_Ill_MetaSV_5513:HG3_Ill_MetaSV_5471:HG2_Ill_MetaSV_5286:HG4_PB_SVrefine2PBcRDovetail_5054:HG4_PB_SVrefine2Falcon1Dovetail_6197:HG4_Ill_SVrefine2DISCOVARDovetail_7265:HG3_PB_SVrefine2PBcRDovetail_4635:HG3_Ill_SVrefine2DISCOVARDovetail_7485:HG2_PB_SVrefine2PBcRplusDovetail_11446:HG2_PB_SVrefine2PB10Xhap12_7364:HG2_PB_SVrefine2Falcon2Bionano_4767:HG2_PB_SVrefine2Falcon1plusDovetail_12242:HG2_Ill_SVrefine2DISCOVARplusDovetail_13386;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7206:HG4_PB_SVrefine2PBcRDovetail_5054:HG4_PB_SVrefine2Falcon1Dovetail_6197:HG4_Ill_SVrefine2DISCOVARDovetail_7265:HG3_PB_SVrefine2PBcRDovetail_4635:HG3_Ill_SVrefine2DISCOVARDovetail_7485:HG2_PB_SVrefine2PBcRplusDovetail_11446:HG2_PB_SVrefine2PB10Xhap12_7364:HG2_PB_SVrefine2Falcon2Bionano_4767:HG2_PB_SVrefine2Falcon1plusDovetail_12242:HG2_Ill_SVrefine2DISCOVARplusDovetail_13386;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00888099;ClusterMaxSizeDiff=0.00888099;ClusterMaxEditDist=0.00888099;PBcalls=10;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1130;DistBack=6680;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1123;REFWIDENED=9:10020267-10022519;PctSeqSimilarity=0.9831;PctSizeSimilarity=0.9938;PctRecOverlap=0.8143;SizeDiff=7;StartDistance=-210;EndDistance=-203;GTMatch=0;TruScore=93;MatchId=4131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:42:1/1:0:7:0:10:./.:0:0:0:0:0/0:56:0:0/1:16:45:1699:.:.
chr9	10404561	HG3_Ill_svaba_12774	GCCATGTTGGTGACACGTCCAAAATCAACCAGTGACCATTAAATAATGACAAGTAGCAATTATTGAGTATGAACTTCTAGAAATTATCATTTCATGTTCTGGCATCTTATTTGGAATATCAAACTGTATTAATAAAATCACTATTAAATATTAAATCTTAATAACAGGACATTTTTATACCTGCAAGTAGAGAAAGCTCTATAGTTCCCAAGCCAATTTCAGATCCTCAGCACTGACAAACATGTATCAGCCAAAATTTGTGTCTACAGAAACAGGTCTAACTTGATCTTTGTTGTAGTGAGCTAGGATATGACTTTCTTCCCTAGCCTTCTAAACTACTGAGGAGAGTTGGCTAGTAAAAATGAGAGAATAGCAATGATGAGATAACACTTCAATCTCATCCTCCACAGCCATGTGTGAACGCCACTAAATACTGTGGCAATGGAAAGGGCCAGCTTCAGACTGATGTAATTTCATCCCTTCTTGCTTGTGAACAATCAGAAGAGCAATCTCATCACATGCTTGGATTAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7207:HG3_PB_pbsv_9817:HG4_10X_allpass_1954:HG4_Ill_Krunchall_14152:HG3_Ill_Krunchall_13608:HG2_Ill_Krunchall_13921:HG4_PB_assemblyticsfalcon_26891:HG3_PB_assemblyticsfalcon_27377:HG2_PB_assemblyticsfalcon_27437:HG2_PB_HySA_18167:HG2_PB_assemblyticsPBcR_26704:HG4_Ill_Krunchall_14151:HG3_PB_HySA_15064:HG2_Ill_tnscope_1153:HG4_Ill_svaba_12720:HG4_Ill_manta_2456:HG4_Ill_MetaSV_5515:HG4_Ill_GATKHCSBGrefine_6972:HG4_Ill_Cortex_3774:HG3_Ill_svaba_12774:HG3_Ill_manta_2351:HG3_Ill_MetaSV_5473:HG3_Ill_GATKHCSBGrefine_6737:HG3_Ill_Cortex_3819:HG3_10X_allpass_2026:HG2_PB_pbsv_10088:HG2_Ill_svaba_12644:HG2_Ill_manta_2881:HG2_Ill_SpiralSDKrefine_17578:HG2_Ill_SVrefine2DISCOVARplusDovetail_13392:HG2_Ill_MetaSV_5288:HG2_Ill_GATKHCSBGrefine_6839:HG2_Ill_Cortex_9216:HG2_10X_allpass_1687:HG2_Ill_breakscan11_1462:HG4_PB_pbsv_10111:HG4_PB_SVrefine2PBcRDovetail_5055:HG4_PB_SVrefine2Falcon1Dovetail_6198:HG4_Ill_SVrefine2DISCOVARDovetail_7269:HG3_PB_SVrefine2PBcRDovetail_4636:HG3_Ill_SVrefine2DISCOVARDovetail_7488:HG2_PB_SVrefine2PBcRplusDovetail_11447:HG2_PB_SVrefine2PB10Xhap12_7366:HG2_PB_SVrefine2Falcon2Bionano_4768:HG2_PB_SVrefine2Falcon1plusDovetail_12244:HG2_Ill_SVrefine2DISCOVARplusDovetail_13391;NumClusterSVs=46;ExactMatchIDs=HG2_10X_allpass_1687:HG2_Ill_Cortex_9216:HG2_Ill_GATKHCSBGrefine_6839:HG2_Ill_MetaSV_5288:HG2_Ill_SVrefine2DISCOVARplusDovetail_13392:HG2_Ill_SpiralSDKrefine_17578:HG2_Ill_manta_2881:HG2_Ill_svaba_12644:HG2_PB_pbsv_10088:HG3_10X_allpass_2026:HG3_Ill_Cortex_3819:HG3_Ill_GATKHCSBGrefine_6737:HG3_Ill_MetaSV_5473:HG3_Ill_manta_2351:HG3_Ill_svaba_12774:HG4_Ill_Cortex_3774:HG4_Ill_GATKHCSBGrefine_6972:HG4_Ill_MetaSV_5515:HG4_Ill_manta_2456:HG4_Ill_svaba_12720;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0265152;ClusterMaxSizeDiff=0.0265152;ClusterMaxEditDist=0.0265152;PBcalls=16;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=21;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-530;DistBack=1333;DistForward=58658;DistMin=1333;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=9:10404557-10405094;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:52:1/1:2:23:0:13:./.:0:0:0:0:1/1:0:38:./.:2:22:.:.:.
chr9	10498740	HG4_10X_allpass_1955	TAAAACCTTCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1154:HG3_Ill_Krunchall_13610:HG2_Ill_Krunchall_13922:HG2_PB_assemblyticsPBcR_26705:HG4_PB_assemblyticsfalcon_26892:HG3_PB_assemblyticsfalcon_27378:HG2_PB_assemblyticsfalcon_27438:HG2_PB_HySA_18168:HG4_Ill_Krunchall_14154:HG3_Ill_Krunchall_13609:HG3_PB_HySA_15065:HG4_Ill_MetaSV_5516:HG3_Ill_MetaSV_5474:HG2_Ill_MetaSV_5289:HG4_PB_pbsv_10112:HG4_PB_SVrefine2PBcRDovetail_5056:HG4_PB_SVrefine2Falcon1Dovetail_6199:HG4_Ill_scalpel_9354:HG4_Ill_manta_2457:HG4_Ill_SVrefine2DISCOVARDovetail_7270:HG4_Ill_GATKHCSBGrefine_6973:HG4_10X_allpass_1955:HG3_PB_pbsv_9818:HG3_PB_SVrefine2PBcRDovetail_4637:HG3_Ill_scalpel_9730:HG3_Ill_manta_2352:HG3_Ill_SVrefine2DISCOVARDovetail_7489:HG3_Ill_GATKHCSBGrefine_6738:HG3_10X_allpass_2027:HG2_PB_pbsv_10089:HG2_PB_SVrefine2PBcRplusDovetail_11448:HG2_PB_SVrefine2PB10Xhap12_7367:HG2_PB_SVrefine2Falcon2Bionano_4769:HG2_PB_SVrefine2Falcon1plusDovetail_12245:HG2_Ill_scalpel_9616:HG2_Ill_manta_2882:HG2_Ill_SVrefine2DISCOVARplusDovetail_13394:HG2_Ill_GATKHCSBGrefine_6840:HG2_10X_SVrefine210Xhap12_7208:HG2_Ill_breakscan11_1463:HG4_Ill_Spiral_830:HG2_Ill_Spiral_716;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7208:HG2_Ill_GATKHCSBGrefine_6840:HG2_Ill_SVrefine2DISCOVARplusDovetail_13394:HG2_Ill_manta_2882:HG2_Ill_scalpel_9616:HG2_PB_SVrefine2Falcon1plusDovetail_12245:HG2_PB_SVrefine2Falcon2Bionano_4769:HG2_PB_SVrefine2PB10Xhap12_7367:HG2_PB_SVrefine2PBcRplusDovetail_11448:HG2_PB_pbsv_10089:HG3_10X_allpass_2027:HG3_Ill_GATKHCSBGrefine_6738:HG3_Ill_SVrefine2DISCOVARDovetail_7489:HG3_Ill_manta_2352:HG3_Ill_scalpel_9730:HG3_PB_SVrefine2PBcRDovetail_4637:HG3_PB_pbsv_9818:HG4_10X_allpass_1955:HG4_Ill_GATKHCSBGrefine_6973:HG4_Ill_SVrefine2DISCOVARDovetail_7270:HG4_Ill_manta_2457:HG4_Ill_scalpel_9354:HG4_PB_SVrefine2Falcon1Dovetail_6199:HG4_PB_SVrefine2PBcRDovetail_5056:HG4_PB_pbsv_10112;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.0909091;PBcalls=16;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=19081;DistForward=-299;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=9:10498741-10499062;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:1:28:0:39:./.:0:0:0:0:1/1:0:39:./.:2:11:.:.:.
chr9	10828091	HG4_Ill_manta_2458	TTTGAGTGACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGGGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1464:HG2_PB_PB10Xdip_30701:HG2_PB_SVrefine2PB10Xhap12_7370:HG4_Ill_Krunchall_14157:HG2_Ill_Krunchall_13925:HG2_PB_pbsv_10090:HG4_PB_pbsv_10114:HG4_Ill_manta_2458:HG4_Ill_SVrefine2DISCOVARDovetail_7272:HG4_Ill_GATKHCSBGrefine_6974:HG4_10X_allpass_1956:HG2_PB_assemblyticsfalcon_27442:HG2_PB_SVrefine2PB10Xhap12_7369:HG2_PB_SVrefine2Falcon2Bionano_4771:HG2_PB_SVrefine2Falcon1plusDovetail_12247:HG2_Ill_manta_2883:HG2_Ill_SVrefine2DISCOVARplusDovetail_13396:HG2_Ill_GATKHCSBGrefine_6841:HG2_10X_allpass_1688:HG2_10X_SVrefine210Xhap12_7210:HG2_PB_HySA_18172:HG2_Ill_tnscope_1155;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7210:HG2_10X_allpass_1688:HG2_Ill_GATKHCSBGrefine_6841:HG2_Ill_SVrefine2DISCOVARplusDovetail_13396:HG2_Ill_manta_2883:HG2_PB_SVrefine2Falcon1plusDovetail_12247:HG2_PB_SVrefine2Falcon2Bionano_4771:HG2_PB_SVrefine2PB10Xhap12_7369:HG2_PB_assemblyticsfalcon_27442:HG4_10X_allpass_1956:HG4_Ill_GATKHCSBGrefine_6974:HG4_Ill_SVrefine2DISCOVARDovetail_7272:HG4_Ill_manta_2458:HG4_PB_pbsv_10114;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0269461;ClusterMaxSizeDiff=0.0269461;ClusterMaxEditDist=0.0269461;PBcalls=9;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=-356;DistForward=-322;DistMin=-356;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=9:10828092-10828441;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4134.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:26:0|1:19:0:0:23:./.:0:0:0:0:0/1:18:20:0/1:32:9:.:.:.
chr9	12556833	HG3_PB_pbsv_9825	ACAATACAATACTTTTCTTTTTTTTTTTTTTTTTTTTTTTTATTCTTCTTTGTTTTATTTATAATTTTTTTTTTTACAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGACTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCGTTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATACTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1466:HG4_Ill_Krunchall_14167:HG2_10X_allpass_1690:HG4_10X_allpass_1957:HG3_10X_allpass_2028:HG4_PB_assemblyticsfalcon_26905:HG3_PB_assemblyticsfalcon_27395:HG4_Ill_Krunchall_14166:HG2_Ill_tnscope_1156:HG4_PB_pbsv_10117:HG4_PB_SVrefine2PBcRDovetail_5060:HG4_PB_SVrefine2Falcon1Dovetail_6202:HG4_Ill_MetaSV_5518:HG4_Ill_GATKHCSBGrefine_6978:HG3_PB_pbsv_9825:HG3_PB_SVrefine2PBcRDovetail_4642:HG3_Ill_GATKHCSBGrefine_6743:HG2_PB_pbsv_10096:HG2_PB_SVrefine2PBcRplusDovetail_11452:HG2_PB_SVrefine2PB10Xhap12_7373:HG2_PB_SVrefine2Falcon1plusDovetail_12249:HG2_Ill_MetaSV_5293:HG2_Ill_GATKHCSBGrefine_6846:HG2_10X_SVrefine210Xhap12_7215:HG3_Ill_MetaSV_5476;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7215:HG2_Ill_GATKHCSBGrefine_6846:HG2_Ill_MetaSV_5293:HG2_PB_SVrefine2Falcon1plusDovetail_12249:HG2_PB_SVrefine2PB10Xhap12_7373:HG2_PB_SVrefine2PBcRplusDovetail_11452:HG2_PB_pbsv_10096:HG3_Ill_GATKHCSBGrefine_6743:HG3_PB_SVrefine2PBcRDovetail_4642:HG3_PB_pbsv_9825:HG4_Ill_GATKHCSBGrefine_6978:HG4_Ill_MetaSV_5518:HG4_PB_SVrefine2Falcon1Dovetail_6202:HG4_PB_SVrefine2PBcRDovetail_5060:HG4_PB_pbsv_10117;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0258179;ClusterMaxSizeDiff=0.0258179;ClusterMaxEditDist=0.0258179;PBcalls=11;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2813;DistBack=23410;DistForward=-2774;DistMin=-2774;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=9:12556834-12559662;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:60:70:0|1:40:4:1:31:./.:0:0:0:0:0/1:36:14:0/1:188:96:3014:.:.
chr9	15394880	HG2_Ill_SpiralSDKrefine_17597	CAAAAAAATACATATATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7223:HG4_PB_HySA_14684:HG2_PB_HySA_18220:HG4_PB_pbsv_10127:HG4_Ill_MetaSV_5520:HG3_PB_HySA_15114:HG3_Ill_MetaSV_5479:HG2_Ill_tnscope_1157:HG2_Ill_MetaSV_5296:HG4_Ill_scalpel_9376:HG4_Ill_manta_2459:HG4_Ill_GATKHCSBGrefine_6984:HG3_PB_pbsv_9837:HG3_Ill_scalpel_9759:HG3_Ill_manta_2357:HG3_Ill_GATKHCSBGrefine_6749:HG3_10X_allpass_2031:HG2_PB_pbsv_10106:HG2_Ill_scalpel_9641:HG2_Ill_manta_2887:HG2_Ill_SpiralSDKrefine_17597:HG2_Ill_GATKHCSBGrefine_6852:HG2_10X_allpass_1691:HG3_Ill_Krunchall_13655:HG2_Ill_Krunchall_13963:HG4_Ill_Krunchall_14191:HG3_Ill_Krunchall_13654:HG2_Ill_Krunchall_13962:HG4_PB_SVrefine2PBcRDovetail_5065:HG4_PB_SVrefine2Falcon1Dovetail_6208:HG3_PB_SVrefine2PBcRDovetail_4648:HG3_Ill_SVrefine2DISCOVARDovetail_7519:HG2_PB_SVrefine2PBcRplusDovetail_11461:HG2_PB_SVrefine2PB10Xhap12_7384:HG2_PB_SVrefine2Falcon2Bionano_4780:HG2_PB_SVrefine2Falcon1plusDovetail_12256:HG2_Ill_SVrefine2DISCOVARplusDovetail_13416;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_1691:HG2_Ill_GATKHCSBGrefine_6852:HG2_Ill_SpiralSDKrefine_17597:HG2_Ill_manta_2887:HG2_Ill_scalpel_9641:HG2_PB_pbsv_10106:HG3_10X_allpass_2031:HG3_Ill_GATKHCSBGrefine_6749:HG3_Ill_manta_2357:HG3_Ill_scalpel_9759:HG3_PB_pbsv_9837:HG4_Ill_GATKHCSBGrefine_6984:HG4_Ill_manta_2459:HG4_Ill_scalpel_9376;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0700637;ClusterMaxSizeDiff=0.0413355;ClusterMaxEditDist=0.190476;PBcalls=13;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=-576;DistForward=-305;DistMin=-576;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=312;REFWIDENED=9:15394585-15395212;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4136.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:1:25:1:25:./.:0:0:0:0:1/1:0:24:./.:2:17:.:.:.
chr9	15602580	HG3_PB_pbsv_9840	ATTGGTGTTACCCAAAAAGTTACCTCATTTTAAGATAGTGTTTCTCATTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG2_10X_allpass_1692:HG2_Ill_breakscan11_1467:HG3_PB_HySA_15115:HG4_PB_assemblyticsfalcon_26925:HG3_PB_pbsv_9840:HG3_PB_assemblyticsfalcon_27415:HG3_Ill_svaba_12808:HG3_Ill_scalpel_9761:HG3_Ill_manta_2358:HG3_Ill_Krunchall_13657:HG3_Ill_GATKHC_16271:HG3_Ill_GATKHCSBGrefine_6750:HG3_Ill_250bpfermikitraw_13262:HG3_Ill_150bpfermikitraw_12848:HG3_CG_vcfBeta_5494:HG3_10X_allpass_2032:HG2_PB_pbsv_10109:HG2_PB_assemblyticsfalcon_27482:HG2_PB_HySA_18222:HG2_Ill_svaba_12671:HG2_Ill_manta_2888:HG2_Ill_Krunchall_13964:HG2_Ill_GATKHC_16318:HG2_Ill_GATKHCSBGrefine_6853:HG2_Ill_250bpfermikitraw_13651:HG2_Ill_150bpfermikitraw_12811;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_1692:HG4_PB_assemblyticsfalcon_26925:HG3_PB_pbsv_9840:HG3_PB_assemblyticsfalcon_27415:HG3_Ill_svaba_12808:HG3_Ill_scalpel_9761:HG3_Ill_manta_2358:HG3_Ill_Krunchall_13657:HG3_Ill_GATKHC_16271:HG3_Ill_GATKHCSBGrefine_6750:HG3_Ill_250bpfermikitraw_13262:HG3_Ill_150bpfermikitraw_12848:HG3_CG_vcfBeta_5494:HG3_10X_allpass_2032:HG2_PB_pbsv_10109:HG2_PB_assemblyticsfalcon_27482:HG2_PB_HySA_18222:HG2_Ill_svaba_12671:HG2_Ill_manta_2888:HG2_Ill_Krunchall_13964:HG2_Ill_GATKHC_16318:HG2_Ill_GATKHCSBGrefine_6853:HG2_Ill_250bpfermikitraw_13651:HG2_Ill_150bpfermikitraw_12811;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0114286;ClusterMaxSizeDiff=0.0114286;ClusterMaxEditDist=0.0114943;PBcalls=7;Illcalls=16;TenXcalls=2;CGcalls=1;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=1;HG2count=12;HG3count=13;HG4count=1;NumTechs=4;NumTechsExact=4;SVLEN=-86;DistBack=81297;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=9:15602581-15602668;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:19:0|1:24:1:0:24:./.:0:0:0:0:0/1:9:23:./.:.:.:.:.:.
chr9	15815306	HG2_PB_pbsv_10111	TGCTTTATTGTTCTCCATTCTCAAAAGTTAATTACATTTAGACCATGCATGGGGAAGAAGAATTACTTCTTTTTGCAAAGAATATGTTTTCACTTATTTTTACTTCTTTTACTTTTTTTTTTTTTTTTTACAAAGAATATGTGTTTAAAAATTTCAAATGGAGTAATCATTATACTAATTCTGGCAGAGGGTAACATTTTGTGATTATTTACCTCCTTCTTATTTTAAATGTGTCCCAACGTTTATATTATTAATAAAATTGTTTGCCCTACTCTGAGGGTACAGAATGAAAATGTTGCATAAAGTAATATAATCACTTAATTTTGAATAAATAATCATATTTTCTCTGGTAAACCTTTAAACAAAAGAACTCCAACACTCATTTTCTTTAAAAAATGTAAAGATCTCTTAGTTGCCAAACCTTGGTTATAATAATAATTAACATCTATGATATAACCCATTTTCATAAAGTAGGATTATTAGCATCATTACTTAATTTAAAAGTCTTATCACTTTTTACTTTAATCCCATATATTTTTATCTTCCTACTGACTTATACCATTGAGACCTATAAGACAGTTAATTATATTTCAAGGTCAGAGAAAAAGAATTAAGAAAACAATAGCTCTCAGACCACTTTTTAAAAATAATAATTTTAGCAGAGAAGATTCAAGATAGAAGGTAGAAGATTCATAAAAAGTTGTCATTTTCATTTTTGTTAGCCTGAACAACAGAAAATATGTAATAATGTAAAACATTCACGTTTTGTGTTTATTATGATGTCCTATTATGATATGATAATTTCCTTTTTTCAAAGTGTATGTTCTCATACATAATTTTAAAAACGTTTTTTCATGTTCAAATTTGTCCTCAATGAGTCATAATTTGAAATTAGAGTTTTTTTGAGTACTAACCTTTGATTAGATCATATTTTAAAATTAAAATATTTGAATCATACAGTTCAATTTGTATAAACTTTTTTACAAACATTATATTAGTTTTTTAAATTAAACCTGCTTAAGTAAGAAAAAAATTAAAAACATGGACTAAACAAAATAACTTGTATATAATCTCATTATCACTCACATATAAACATTATTAATATTTTGGCAAATAAAACTGGAAATATGCTATGCATAGTTTCATATCTTGTTTTTGAGGCATGCAGTGACATTATTTTTACTTATATTTTCGAAGAATAATTCTAGCATCTATTGAAGTATAGACTATACGTATGCAAAACTGGAAACAGAGGCAAGTTAGGAGGCTAACAGTATAATCCAGTTCAGTTCTAAGACGAGTGGCTTAGGACAGGGTGGTAGGAGTAAAGAGAGGTTAGATTCTGCATGTACTTGCATTTTGAATGTTAACGCTTATGTAATTTTCTAATGGATCAGATGTGAATGTCAGAGAGATGAAACAAGGACAATCCTGAGCCACTGGGTGAATGGAATTGCTATTAAGCAGTTATTAAGATAATTTAATAACCTTTTTTAATGAACCATATAATATTCTGTTTCATGAATGTGCTAAAATGTATTTAACTATTTTCTTGTTGGATATTCAGATTGTATTCCTTTTTCACTATTAAAAGTTAAGATGAACATCTTGTAATTAGATCTTTGACTACATAGCTGATTATATTCTCAGGATAGAGCTCAAGAAGCAGACTGAGTCAAAAGATAAAAGAAGTTTTATAGTTATGTGTGTGTGTGTATTTCCTTAAGGCTGTGGATGTTTTTCTCAGTTCTGGTGTTTTTCTGAGAGGATGTGTAAGCGCACTTGTCTAATTCCATTCTGATTGGCATTGGCTGTCATTAGGTGTTACCATTAAAACACCAATAACAACAAATCAAAACCAAGAACCTTTGCCAGTGTGACAGATAAGAAAAGGTGTACAGTGGGGTGGAGCCAAGATGGCCAAATAGGAACAGCTCCAGTCTACAGCTCCCAGTGTGAGCGACGCAGAAGATGGGTGATTTCTGCATTTCCAACTGAGGTAACGGGTTCATCTCACTGGGGAGTGCCGAACAGTGGGTGCAGGACAGTGGGTGCAGTGCAGCAAGCATGAGCCGAAGCAGGGCGAGGCATTGCGTCACCCGGGAAGCACAAGGGGTCAGGGAATTCCCTTTCCTAGTCAAAGAAAGGAGTGACAGAGGGCACCTGGAAAATTGGGTCACTCCCACCCTAATACTGCACTTTTCCAAAGGGCTTAACAAACAGCACACCAGGAGATTATATCCAGCACCTGGCTTGGAGGGTCCTACGCCCACGGAGCCTCGCTCATTGCTAGCACAGCAGTCTGAGATCAAACTGCGAGGTGGCAGGGAGGCTGGGGGAGGGGCGCCTGCCATTGCTGAGGCTTGAGTAGGTAAGCAAAGCAACCAGGAAGCTCAAACTGGGTGGAGCCCACCACAGCTCAAGGAGGACTGCCTGCCTCTGTAGGCTCTACCTCTGGGGGCAGGGCACAGACAAACAAAAGGCAGCAATAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCACACAGCTTGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGAGTAACCTAGCTGGGAGGCATCCCCCGGTAGGGGCAGACTGACACCTCACACGGCCGGGTACTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGGCAGCAGCATTTGCGGTTCACTAACATCTGCTGTTCTGCAGCCACCACTGCTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGTAAACCCCAACAGACCTGCAGCTGAGGATCCTGACTGTTAGAAGGAAAACTAACAAACAGAAGGGGACATGCACACCAAAACCCCATCTGTACGTCACCATCATCAAAGACCAAAGGTAGCTAAAACCACAAAGATAGGGAAAAAACAGAGCAGAAATACTGGAAACTGTAAAAAACAGAGTGCCTCTCCTCCTCCAAAGGAATGCAGCTCCTCACCAGCAACGGACCAAAGCTGGACAGAGAATGACTTTGATGAGTTGAGAGAAGAAGGCTTCAGAAGATAAAACTACTCCGAGCTAAAGGAGGAAGTTCGAACGAATGGCAAAGAAGTTAAAAACCTTTAAAAAAAAATTAGACGAATGGCTAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGGACCTGATGAAGCTGAAAACCACGGCACGAGAACTACGTGATAAATGCACAAGCCTCAGTAGCTGATTCGATCAACTAGAAGAAAGTATCAGCGATGGAAGATGAAATGAATGAAATGAAGCAAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAGAAACGAACAAAGCCTCCAAGAAATATGGGACTATGTGGAAAGACCACATCTACGTCTGATTGGTGTACCTGAAAGTGACAGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCTAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAAATTCAGGAAATACAGAGAACGCCACAAAAATACTCCTCGAGAAGAGCAACTCTGAGACACATAATTGTCAGATTCCCCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTTGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCATCACCAGGCCTGCCCTGCAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACTGGTACTAGCCACTGCCAAAACATGCCAAATTGTAAAGACCATCGAGGCTAGGAAGAAACTGCATCAACTAACGAGCAAAATAACCAGCTAACATCATAATGACAGGATCAGATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACCCATAGACTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAATAGGCAGGGGTTGCCATCCTAATCTCGGATAAAACACACTTTAAACCAACAAAGATGAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATAAATTCAACAAGAAGAACTAACTGTCCTAAATATATATGCACCCAATACAGGAACACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAAAACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAGTTAACAAGGATATCCAGGAATTGAACTCAGCTCTGCACGAAGAGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAATAGAATACACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTGTCTCAGACCACAGTGCAATCAAACTAGAACACAGGATTAAGAAACTCACTCAAAACTGCTCAACTACAGGGAAACTGAACAGCCTGCTCCTGAATGACTACTGGGTACATAACAAAATGAAGGCAGAAATAAAGGTGTTCTTTGAGACCAATGAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTTTAGCACTAAATGCCCACAAGAGAAAGCAGAAAAGATCTAAAATCGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGGCACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACAAAATTGATAGACCACTAGCAAGACTAATGAAGAAAAGAGAGAAGAATCAAATAGATGCAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGACTGCTATAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATACACCCTCCTAAGACTAAACCAGGAAGAATTTGAATCTCTGAATAGACAATAACAGGCTCTGAAATTGAGGCAATAATTAATAGCTTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTACAATTAATGGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCGTGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAATGTCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTACCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATATGAAAATCAATAAACATAATCCAGCATATAAACAGACCCAAAGACAAAAATCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACGCTTCATGGTAAAAACTCCCAATAAATTAGGTATTGATGGGATGTATCTCAAAATAATAAGAGCTATCTATGACAGACCCACACCCAGTATCATACTGAATGGACAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGCATTCAGTTAGGAAAACAGGACGTCAAATTGTCCCTGTTTGCAGATCACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTGAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAGTCACAAGCATTCTTATACACCAATAACAGACAAACAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGACGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATTCAAACAAATGGAAGAACATTCCATGCTCCTGGGTGGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATACATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACAACAAG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5297:HG2_10X_allpass_1693:HG4_PB_pbsv_10130:HG4_10X_allpass_1958:HG4_Ill_Krunchall_14192:HG2_Ill_Krunchall_13967:HG2_PB_assemblyticsPBcR_26751:HG2_PB_HySA_18226:HG2_Ill_tnscope_1158:HG4_PB_SVrefine2PBcRDovetail_5068:HG4_Ill_MetaSV_5521:HG3_PB_SVrefine2Falcon1Dovetail_6165:HG2_PB_pbsv_10111:HG2_PB_SVrefine2PBcRplusDovetail_11464:HG2_PB_SVrefine2PB10Xhap12_7388;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_MetaSV_5297:HG4_PB_SVrefine2PBcRDovetail_5068:HG4_Ill_MetaSV_5521:HG3_PB_SVrefine2Falcon1Dovetail_6165:HG2_PB_pbsv_10111:HG2_PB_SVrefine2PBcRplusDovetail_11464:HG2_PB_SVrefine2PB10Xhap12_7388;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00150807;ClusterMaxSizeDiff=0.00150807;ClusterMaxEditDist=0.00150807;PBcalls=8;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-6634;DistBack=6697;DistForward=-6631;DistMin=-6631;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=9:15815307-15821943;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:67:0|1:45:0:1:37:./.:0:0:0:0:0/1:46:17:0/1:447:210:6626:.:.
chr9	16847393	HG2_Ill_svaba_12679	TCGGGGCGGGGGGGGGGGGGCGGCGGGCAACAACCCTGAAGCTTTCACTGAGCCTACATTACAAATTAAGGAAGTTGACTTTATAAAATTCATTTGGTTAAAAAGGAAAAAAGAATTGACCAAACA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_10134:HG4_Ill_Krunchall_14202:HG2_Ill_Krunchall_13974:HG4_PB_assemblyticsfalcon_26933:HG2_PB_assemblyticsPBcR_26759:HG4_PB_SVrefine2Falcon1Dovetail_6212:HG4_Ill_svaba_12755:HG4_Ill_scalpel_9384:HG4_Ill_manta_2460:HG4_Ill_SVrefine2DISCOVARDovetail_7300:HG4_Ill_MetaSV_5525:HG4_Ill_GATKHC_16343:HG4_Ill_GATKHCSBGrefine_6990:HG4_10X_allpass_1960:HG2_PB_pbsv_10114:HG2_PB_SVrefine2PBcRplusDovetail_11465:HG2_PB_SVrefine2PB10Xhap12_7390:HG2_Ill_svaba_12679:HG2_Ill_scalpel_9652:HG2_Ill_manta_2891:HG2_Ill_breakscan11_1468:HG2_Ill_SpiralSDKrefine_17608:HG2_Ill_MetaSV_5299:HG2_Ill_GATKHC_16330:HG2_Ill_GATKHCSBGrefine_6856:HG2_10X_SVrefine210Xhap12_7227:HG4_PB_SVrefine2PBcRDovetail_5071;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7227:HG2_Ill_GATKHCSBGrefine_6856:HG2_Ill_GATKHC_16330:HG2_Ill_MetaSV_5299:HG2_Ill_SpiralSDKrefine_17608:HG2_Ill_breakscan11_1468:HG2_Ill_manta_2891:HG2_Ill_scalpel_9652:HG2_Ill_svaba_12679:HG2_PB_SVrefine2PB10Xhap12_7390:HG2_PB_SVrefine2PBcRplusDovetail_11465:HG2_PB_pbsv_10114:HG4_10X_allpass_1960:HG4_Ill_GATKHCSBGrefine_6990:HG4_Ill_GATKHC_16343:HG4_Ill_MetaSV_5525:HG4_Ill_SVrefine2DISCOVARDovetail_7300:HG4_Ill_manta_2460:HG4_Ill_scalpel_9384:HG4_Ill_svaba_12755:HG4_PB_SVrefine2Falcon1Dovetail_6212;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0393701;ClusterMaxSizeDiff=0.0393701;ClusterMaxEditDist=0.0395257;PBcalls=8;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-125;DistBack=34119;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=9:16847394-16847520;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:33:0|1:33:2:4:29:./.:0:0:0:0:0/1:23:25:./.:.:.:.:.:.
chr9	18286561	HG2_10X_SVrefine210Xhap12_7233	CAGTTTATGGTTTTCAGATATAATCATTTTAATGCAGCAGTCCAGAAATATTGGAAAGTAATAGGGTCTTTCTGAATCTGTGCTCATACTTCATGTTAAATTCCCTAGAGTTATCAAAATAACTTCTAGGATTATGCATTATCAGGCCCATTCCTATAAGAGAATTTTCCATAGAAGAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_10121:HG4_Ill_GATKHCSBGrefine_6998:HG2_Ill_GATKHCSBGrefine_6859:HG2_Ill_SpiralSDKrefine_17618:HG4_PB_SVrefine2PBcRDovetail_5078:HG4_Ill_manta_2465:HG4_Ill_SVrefine2DISCOVARDovetail_7310:HG4_Ill_Cortex_3779:HG2_PB_SVrefine2PBcRplusDovetail_11472:HG2_PB_SVrefine2PB10Xhap12_7398:HG2_PB_SVrefine2Falcon2Bionano_4790:HG2_PB_PB10Xdip_31146:HG2_PB_PB10Xdip_31145:HG2_Ill_manta_2894:HG2_Ill_Cortex_9249:HG2_10X_SVrefine210Xhap12_7233:HG4_PB_HySA_14715:HG4_Ill_Spiral_835:HG2_Ill_Spiral_718:HG4_Ill_svaba_12776:HG4_10X_allpass_1964:HG2_Ill_svaba_12693:HG2_Ill_scalpel_9660:HG2_PB_assemblyticsPBcR_26772:HG4_Ill_MetaSV_5532:HG2_PB_HySA_18253:HG2_Ill_MetaSV_5303:HG4_PB_pbsv_10147:HG4_Ill_Krunchall_14221:HG2_Ill_Krunchall_13987;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7233:HG2_Ill_Cortex_9249:HG2_Ill_manta_2894:HG2_PB_PB10Xdip_31145:HG2_PB_PB10Xdip_31146:HG2_PB_SVrefine2Falcon2Bionano_4790:HG2_PB_SVrefine2PB10Xhap12_7398:HG2_PB_SVrefine2PBcRplusDovetail_11472:HG4_Ill_Cortex_3779:HG4_Ill_SVrefine2DISCOVARDovetail_7310:HG4_Ill_manta_2465:HG4_PB_SVrefine2PBcRDovetail_5078;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0495868;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.0716253;PBcalls=11;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-178;DistBack=0;DistForward=864;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=9:18286561-18286739;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9944;PctRecOverlap=0.9777;SizeDiff=1;StartDistance=3;EndDistance=4;GTMatch=0;TruScore=98;MatchId=4141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:40:./.:24:28:13:6:./.:0:0:0:0:0/1:43:27:./.:.:.:.:.:.
chr9	18751826	HG2_10X_allpass_1695	TAGAAATACAACTTGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCGGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_719:HG4_Ill_Krunchall_14226:HG2_Ill_Krunchall_13993:HG2_Ill_Krunchall_13992:HG4_PB_assemblyticsfalcon_26948:HG3_PB_assemblyticsfalcon_27437:HG2_PB_assemblyticsPBcR_26775:HG4_Ill_MetaSV_5533:HG3_Ill_MetaSV_5484:HG2_Ill_tnscope_1159:HG4_PB_pbsv_10149:HG4_PB_SVrefine2PBcRDovetail_5079:HG4_PB_SVrefine2Falcon1Dovetail_6219:HG4_Ill_scalpel_9400:HG4_Ill_manta_2466:HG4_Ill_SVrefine2DISCOVARDovetail_7313:HG4_Ill_GATKHCSBGrefine_7000:HG4_10X_allpass_1965:HG3_PB_SVrefine2PBcRDovetail_4660:HG3_Ill_scalpel_9781:HG3_Ill_manta_2361:HG3_Ill_SVrefine2DISCOVARDovetail_7532:HG3_Ill_GATKHCSBGrefine_6757:HG2_PB_pbsv_10123:HG2_PB_SVrefine2PBcRplusDovetail_11473:HG2_PB_SVrefine2PB10Xhap12_7399:HG2_PB_SVrefine2Falcon2Bionano_4791:HG2_PB_SVrefine2Falcon1plusDovetail_12267:HG2_Ill_scalpel_9663:HG2_Ill_manta_2895:HG2_Ill_SpiralSDKrefine_17620:HG2_Ill_SVrefine2DISCOVARplusDovetail_13428:HG2_Ill_MetaSV_5304:HG2_Ill_GATKHCSBGrefine_6861:HG2_10X_allpass_1695:HG2_10X_SVrefine210Xhap12_7235:HG2_PB_assemblyticsfalcon_27506:HG3_PB_pbsv_9855:HG2_Ill_breakscan11_1469;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7235:HG2_10X_allpass_1695:HG2_Ill_GATKHCSBGrefine_6861:HG2_Ill_MetaSV_5304:HG2_Ill_SVrefine2DISCOVARplusDovetail_13428:HG2_Ill_SpiralSDKrefine_17620:HG2_Ill_manta_2895:HG2_Ill_scalpel_9663:HG2_PB_SVrefine2Falcon1plusDovetail_12267:HG2_PB_SVrefine2Falcon2Bionano_4791:HG2_PB_SVrefine2PB10Xhap12_7399:HG2_PB_SVrefine2PBcRplusDovetail_11473:HG2_PB_pbsv_10123:HG3_Ill_GATKHCSBGrefine_6757:HG3_Ill_SVrefine2DISCOVARDovetail_7532:HG3_Ill_manta_2361:HG3_Ill_scalpel_9781:HG3_PB_SVrefine2PBcRDovetail_4660:HG4_10X_allpass_1965:HG4_Ill_GATKHCSBGrefine_7000:HG4_Ill_SVrefine2DISCOVARDovetail_7313:HG4_Ill_manta_2466:HG4_Ill_scalpel_9400:HG4_PB_SVrefine2Falcon1Dovetail_6219:HG4_PB_SVrefine2PBcRDovetail_5079:HG4_PB_pbsv_10149;NumExactMatchSVs=26;ClusterMaxShiftDist=0.109155;ClusterMaxSizeDiff=0.109155;ClusterMaxEditDist=0.109155;PBcalls=14;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-290;DistBack=48126;DistForward=-279;DistMin=-279;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=9:18751827-18752132;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:28:./.:23:4:10:25:./.:0:0:0:0:0/1:14:26:./.:.:.:.:.:.
chr9	19122484	HG3_Ill_GATKHCSBGrefine_6758	TACCATATAGCCTAGGTATATAGCAGGCTATACACCATATAGCCTAGGTATATAGCAGGCTATACACCATATAGCCTAGGTATATAGCAGGCTATAC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12268:HG2_PB_pbsv_10124:HG3_PB_pbsv_9856:HG4_PB_assemblyticsfalcon_26950:HG4_PB_SVrefine2Falcon1Dovetail_6220:HG3_Ill_svaba_12836:HG3_Ill_Krunchall_13685:HG3_Ill_GATKHCSBGrefine_6758:HG3_Ill_250bpfermikitraw_13286:HG3_Ill_150bpfermikitraw_12876:HG2_Ill_svaba_12701:HG2_Ill_manta_2896:HG2_Ill_SpiralSDKrefine_17623:HG2_Ill_GATKHCSBGrefine_6862:HG2_Ill_250bpfermikitraw_13680:HG3_PB_SVrefine2PBcRDovetail_4661:HG3_Ill_SVrefine2DISCOVARDovetail_7534:HG2_PB_SVrefine2PBcRplusDovetail_11474:HG2_PB_SVrefine2PB10Xhap12_7401:HG2_PB_SVrefine2Falcon2Bionano_4792;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13680:HG2_Ill_GATKHCSBGrefine_6862:HG2_Ill_SpiralSDKrefine_17623:HG2_Ill_manta_2896:HG2_Ill_svaba_12701:HG3_Ill_150bpfermikitraw_12876:HG3_Ill_250bpfermikitraw_13286:HG3_Ill_GATKHCSBGrefine_6758:HG3_Ill_Krunchall_13685:HG3_Ill_svaba_12836:HG4_PB_SVrefine2Falcon1Dovetail_6220:HG4_PB_assemblyticsfalcon_26950;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0104167;ClusterMaxSizeDiff=0.0103627;ClusterMaxEditDist=0.0208333;PBcalls=9;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-96;DistBack=-87;DistForward=-71;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=71;REFWIDENED=9:19122475-19122641;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:36:0|1:20:1:0:33:./.:0:0:0:0:0/1:17:20:./.:.:.:.:.:.
chr9	19427982	HG2_Ill_manta_2897	TTTTCCTTTCCTTTCCTTTTTCCTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	T	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_12842:HG3_Ill_scalpel_9785:HG3_Ill_manta_2362:HG3_Ill_Krunchall_13688:HG3_Ill_GATKHC_16300:HG3_Ill_GATKHCSBGrefine_6759:HG3_Ill_250bpfermikitraw_13290:HG3_Ill_150bpfermikitraw_12880:HG2_Ill_scalpel_9667:HG2_Ill_manta_2897:HG2_Ill_Krunchall_13998:HG2_Ill_GATKHC_16350:HG2_Ill_GATKHCSBGrefine_6863:HG2_Ill_250bpfermikitraw_13684;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12842:HG3_Ill_scalpel_9785:HG3_Ill_manta_2362:HG3_Ill_Krunchall_13688:HG3_Ill_GATKHC_16300:HG3_Ill_GATKHCSBGrefine_6759:HG3_Ill_250bpfermikitraw_13290:HG3_Ill_150bpfermikitraw_12880:HG2_Ill_scalpel_9667:HG2_Ill_manta_2897:HG2_Ill_Krunchall_13998:HG2_Ill_GATKHC_16350:HG2_Ill_GATKHCSBGrefine_6863:HG2_Ill_250bpfermikitraw_13684;NumExactMatchSVs=14;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-54;DistBack=1661;DistForward=6;DistMin=6;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=108;REFWIDENED=9:19427960-19428121;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:19:0|1:18:2:1:18:./.:0:0:0:0:0/1:23:18:./.:.:.:.:.:.
chr9	20135336	HG2_Ill_svaba_12710	AATTTTTAATTACAATTTAAAATTTTAATTTTTAATTACAATTTAAAATTTTC	A	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6221:HG3_PB_HySA_15155:HG3_PB_assemblyticsfalcon_27444:HG3_Ill_svaba_12845:HG3_Ill_manta_2363:HG3_Ill_Krunchall_13699:HG3_Ill_GATKHC_16311:HG3_Ill_GATKHCSBGrefine_6760:HG3_Ill_250bpfermikitraw_13300:HG3_Ill_150bpfermikitraw_12890:HG2_PB_assemblyticsPBcR_26785:HG2_Ill_svaba_12710:HG2_Ill_manta_2898:HG2_Ill_Krunchall_14007:HG2_Ill_GATKHC_16361:HG2_Ill_GATKHCSBGrefine_6865:HG2_Ill_250bpfermikitraw_13693:HG2_Ill_150bpfermikitraw_12851:HG2_Ill_SpiralSDKrefine_17633:HG2_PB_assemblyticsfalcon_27514:HG3_PB_pbsv_9857:HG2_PB_pbsv_10125;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12851:HG2_Ill_250bpfermikitraw_13693:HG2_Ill_GATKHCSBGrefine_6865:HG2_Ill_GATKHC_16361:HG2_Ill_Krunchall_14007:HG2_Ill_manta_2898:HG2_Ill_svaba_12710:HG2_PB_assemblyticsPBcR_26785:HG3_Ill_150bpfermikitraw_12890:HG3_Ill_250bpfermikitraw_13300:HG3_Ill_GATKHCSBGrefine_6760:HG3_Ill_GATKHC_16311:HG3_Ill_Krunchall_13699:HG3_Ill_manta_2363:HG3_Ill_svaba_12845:HG3_PB_assemblyticsfalcon_27444;NumExactMatchSVs=16;ClusterMaxShiftDist=0.204082;ClusterMaxSizeDiff=0.204082;ClusterMaxEditDist=0.229167;PBcalls=7;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=16281;DistForward=75246;DistMin=16281;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=9:20135335-20135401;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4145.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:34:0|1:29:3:1:33:./.:0:0:0:0:0/1:35:18:./.:.:.:.:.:.
chr9	22057960	HG2_PB_SVrefine2Falcon2Bionano_4796	TAAAAAATTAGCCAGGTGTGGTGGTGGGCACCTGTAATCCCAGCTACTGGGGAGGCTGAGGCAGGAGATTTGCTTGAA	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_26962:HG4_PB_pbsv_10155:HG2_PB_pbsv_10132:HG3_PB_pbsv_9864:HG2_PB_HySA_18282:HG4_PB_HySA_14737:HG2_PB_SVrefine2Falcon1plusDovetail_12274:HG4_PB_SVrefine2PBcRDovetail_5084:HG4_Ill_scalpel_9411:HG4_Ill_manta_2467:HG4_Ill_SVrefine2DISCOVARDovetail_7324:HG4_Ill_GATKHCSBGrefine_7005:HG4_Ill_250bpfermikitraw_13596:HG4_Ill_150bpfermikitraw_13024:HG3_PB_SVrefine2PBcRDovetail_4665:HG3_PB_HySA_15165:HG3_Ill_scalpel_9799:HG3_Ill_manta_2366:HG3_Ill_SVrefine2DISCOVARDovetail_7547:HG3_Ill_GATKHCSBGrefine_6766:HG3_Ill_250bpfermikitraw_13314:HG2_PB_SVrefine2PBcRplusDovetail_11478:HG2_PB_SVrefine2PB10Xhap12_7406:HG2_PB_SVrefine2Falcon2Bionano_4796:HG2_Ill_scalpel_9677:HG2_Ill_manta_2899:HG2_Ill_SpiralSDKrefine_17640:HG2_Ill_GATKHCSBGrefine_6870:HG2_Ill_250bpfermikitraw_13703:HG2_10X_SVrefine210Xhap12_7243;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7243:HG2_Ill_250bpfermikitraw_13703:HG2_Ill_GATKHCSBGrefine_6870:HG2_Ill_SpiralSDKrefine_17640:HG2_Ill_manta_2899:HG2_Ill_scalpel_9677:HG2_PB_SVrefine2Falcon2Bionano_4796:HG2_PB_SVrefine2PB10Xhap12_7406:HG2_PB_SVrefine2PBcRplusDovetail_11478:HG3_Ill_250bpfermikitraw_13314:HG3_Ill_GATKHCSBGrefine_6766:HG3_Ill_SVrefine2DISCOVARDovetail_7547:HG3_Ill_manta_2366:HG3_Ill_scalpel_9799:HG3_PB_HySA_15165:HG3_PB_SVrefine2PBcRDovetail_4665:HG4_Ill_150bpfermikitraw_13024:HG4_Ill_250bpfermikitraw_13596:HG4_Ill_GATKHCSBGrefine_7005:HG4_Ill_SVrefine2DISCOVARDovetail_7324:HG4_Ill_manta_2467:HG4_Ill_scalpel_9411:HG4_PB_SVrefine2PBcRDovetail_5084;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0789474;ClusterMaxSizeDiff=0.0789474;ClusterMaxEditDist=0.108108;PBcalls=13;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-77;DistBack=67310;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=77;REFWIDENED=9:22057961-22058114;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:./.:19:22:14:12:./.:0:0:0:0:0/1:34:22:./.:.:.:.:.:.
chr9	22496528	HG2_PB_SVrefine2PBcRplusDovetail_11480	ACCCAAATGGCCACCTGGTTTTGTGCTTCAAATCCAGGGCCCTGGTGGCCTAGGGGGCTGGCACTTTTAATAATGGTTTTACGTTCCATTCTACCCTTTTCTTTTCATAAGTAAATAAAGGAACAGTTTTTGATGAAGAGAATGAGAGAAAAGAATGCACGAGTTTGGCAGTATGGCCATATTTTCACTGATTGCTGTTTCAGTGTATTGCTCCAACCTGTTCCAATAATAAAATTATTAATAATTCATTGGAACCTTTCTTTTCATGAGTAATTAGTCGAGCAGCACTGAAGAAGATTCTAAAGGAAAGATGTTCATAGACCAAGAAAAGAAGTGTGTAAATATGATTATGATTATCTTATTTTGGAAAGTGACAATACATACTACTACTTTCCACCAATCAGAGGCCAACAATAGCAACACTGATGATTTGTCTAGGCTGTGGTCATCTATTTACGCTTTCGCATTCAATAAAATTGTGCAGTTACTATGGCAACTGGAAGTCTATAGGGTTTGTTTCAGAACCTGTTCTTGGCAGTTTATGTGTGTAAATCTTCTACATACTGATATGAGGTTCTAGTGCTGTGTTTTATTAATTTGTATTTTTCTTGCATCTCAGATGTTGTGCTATTTTATAAACCATGAAGTAAAAAAGAAATTGGCTGAAGAAACAATTTCTCTTGAGAGGCTGACCTAGGCGCTTTAGAAACGTTTGGCTTACTATTGTGTAAACAAAGCACAAAACTTCTTATTTCAGAAATCTTACGTAAACATTAATACTAATTTGCAAAACAGGGCGCAAGCATTGGATCTTTTGCAATTCACGTTCCTAAGCAGCTTAATAATTATTTCTTTCACATGGAAGTTAGAAAAACAAATCCTAGCTTCCAAAGAAGAATATGTAGCCATGAAACGTGTTTTTCTTCTTAACATTTACACAAAAAGCATTACACTGATAGTTCTGTGAAATGATAAACTCTTCTGGTAAAAGTAAACTGCGTCATTGTCGCCCTAGAATAAAAAGACGGTGGAGAAACAGCTTTACTAACACTTAGGATCAATACAGCATTGACGAATTAAACTTTCTTAATAGACTGCTGTATATTTTACAATCTCTTATAATAATATTCAATATTTTATCAAACAAATACTTGAACCATGTTGAGGAAGTATGTGGTTGGTGTGGGTCAGTGTGGTCTCTTTATAAATACAAGTCTTTAGCATGAGACAGACCTGGGTTTGAAAACTGGTTCTGCTTCTTGCTAAGTATATCAACTTGGCCTTTCAGAGCATCTATTACCTTATCTGAAAAATGCAAATAGGAATATATATATATTTATTGGGTAGATTTTCTGCATAGACAAATTGTTTAAGTTGTAAAATATACGTAACATAAAATTTTTTGAGGAACCCCACACTGTTTTTCATAGCGATTGTATCATTTTACATTCCTCTCAGTCATACTTGAGAGTTCCAATTTGTCCGTATGTTTACCAGTAACACTTGTTATTGTTTCTTAAAAAAATATATACTAGCCATTGTAAAGGATGTGAAGTGATGTCTTGTAGGTTTGACTTGCATTCCTGATGATTAGTGATACTGAGCATCTTTTCACATGCTATTGGCCATTTGTACATCTTCTTTGGAGAATGCCTATTCATGTCTGTCATGGGATAAATTGCGTCCCCTCAAAAATCACATATTAAAGCCCCAATAGCTCAAAATGTAACCGTATCTGGAGATAATGTCTTGAAAGATGTAATTCCATTAAAATGAGATCATTAGGGTGGCCCCTGATCCAATATGACTGCTGTCTTATAAGAAGAGGGAATTTGAACCCAGGTGTGCACACACAGTAAAGACGATGTGAAGACAGAGGGAGAATATGGCCATCTATAAGCCAAGGAGAGTGGCCTCGGAAGAAATCTACCTTGCCAATACTTTGCTGTCAGACTTGTAGCCTCCAGAACAGTGAGAAATATTTGTTGCTTAAGCCACCCAGTCTGTGGTACTTTGTTAATGGCATCTCTATCAAATTAATACAATGTCTTCATTTATTTTTAAGTGAAGTTTTCATTGTTGTTGTTGAGTTGTAGAAGATCTTTATATATTCTATATATTAAGCCCTTTATCAGTATATGATTTGCAAATATTTTCTCTCATTTCATGTGTATACATCAAATTTTTGCAAAATATATAAAATATCTGGCTTATAGATAATACACAAGAAATGATAGCTGTTGTCAATGAGTGCACATTTATTACATTTTTAAAGTCTTCCTTATTTTTCTTTATGTGTTTGACTTTTTATTGTAAAAATGATACTTCAAAGAAAAAAGGAACATTTTAGTATAATGGAGTCTGTTGATATCAATAGAAAACGTGTAATTGTCTACTTGCAGATGACTTAGTATAAATGAAATTGGTCAAACACAGTATCTGCAAACGTTAGTTTCAAAGAAAATGCCAAGCCAAAAAGAAGAAACATTTTAGATATCAGACCAGATATATAGACAAAGCTGACTGAGTAGCATACAGCCTATGTGAGTCAATATAGTGCAGAAAAAGTTTTAATATGGCTCAAATCCTCTGAATTGATGATGTAAACATTTCAATAGATAAAGTCTAAAGTAGACAACATTAATATGTTGATTAGAGGGGGAAAATGCCAAATTATATATATAGCACCGAAAAATATACCATTATTTCCTACAGATAATTGCAAATACAAAAACTTGTAAATTAGATTAAAATTTAGTAGTTTGTATGAGCATTTTTTTGGCAAGTGGATGTGATTAACTGGTCAAAGAAATTGAAGGTAAATGCTGTTTTGCAAACAAAACCAAAATTAGGGCAAAACAGAAAAGCTCAAAGAAGACAAGTAAGCAAAAAACTTCCATGTTCATATTTTAAACTGCAAGTTTTACCCTAGGTGAGTAAAGTGGGCATATTTATTTGGGATTAGGTAGTAAGATTTCATTTTAAAAAGTGTTTTCTTATATGCATTTACTTGTAAATAGCAGCAATTATTTAAATTTTTTTCTTGTCATATAATAAGTGGATCTGTTTTAGTTTTGTCATTTGAAATTAGAAATTTAATACAAAATTTTTGAGGAAAAATAAGATAGATAAAAGAGTAAAATAAAATCCCAGAATTTTCACTTGGCAACAATTCACCTATGATTTACCAAAAATCTGTATGAGTAACCGATTTATTTGAAACAAATCATCCTAAACCTAGTATCTTGAAACAATAGCAATCAGGTGTTTTCCCAGAAATCTCCAACTGAGTAACTCTTTGTGAAGAAGATGGCTTGTGCTGTAAGAAGCATCAGCTGAAATTGCTTGATTGGAAAGCTAAAGGGTTTTCTTTCAAAATGGCTCACTCACATGGCTTGGAAGTTGGTGCAGACTGCTGGTTGCTAACTCAGTCAAGGTTGGGGACTAGGAACCCTGTGTCTTCTCTATGTGTGCCTCTCTGCAGACTCATGAGTTCCCTTAACACATAGTAGTTAGATTTTAAGAGTTAGCATGGCATTTTTTAGCCTTTACTAATCAAAAATCATACAGCTTCATTTCCACCATATGATGTTGACTGAGATAATCACAAAAGACTACCTGGGTTGAAAGAGAGGATTATAAACTCTTCCATGTAAAGGAGTTTATAATCCTCCTTTTCATACTCTTCATACCTCAAGAAGAGTATGTGGAACAGGTGATGTTGTAACCATCTTCAGAAAATACAATTTGCTGTGCTCCACACAATTTAGATTCCTTCCATATGCCAAATGCATTCATCGATTCCCCAAGAACTCTAAATTTCTTATCCCATTGTGGCGTGAACTTCAGTCTCAGAGTCCAAGATCTTGATATTTAAACCAGAGATAGCACAATTCGTTGGGAATTGATATGGTTTGGATTTGTGTTCCTGCCCAAATCTCCTGTTGAATTGTAATCCCCGTTGTTAGAGGAGAGGCCTGACAGGCGGTGGTTGGATCATGGGGCAGATTTCCCCCTTGCTATTCTCATGGTAGTGAGTTCTCACGAGGTCTGATTATTTAAAGCTGTGTAGCACCTCCCCCTTCACTCTCTTCCTCTTGCTCCAGTCATGTAAGATATGCTTGCTTCCCCTTCTGCCATGATTGAAAGTTTCCTGAAGCCTCCCCAGCCATGCTTCCTGTACATCCTATGGAACTGTGAGCCAACTAAACCCCTTCTCCTTATAAATTACCCAGTTTCGGGTATTTCTTTGTAGCAGTGTGAGAATGGAGTAATACAGGAACATTCTCTTGAGTATATTTCTTCTTGATCTGAAGATCTTTGAACTAAACATACAGTATATTCTCTCTTTTAATACATATGATAACTGCTATAGACACTCTTCTTCAAAAGCAGGAAAACGGAAGGCTCACAACAGGTCCATAGCAGCTCTGTTTAAGCTGGATCCGTATTACCAGAATCTCTGTGTATTAGTTTGTTCTCATGCTGCTATAAGGACATACCCAAGACTGGTTAATTTATAAAGAAGGAGGTTTAATTAACTCATAGTTCTGCAGGGCTGTGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAAGCAAACACGTCTTCCCTCACAAGGTGGCAGGAGAGAGAAGAATGAGAGCCAAGCAAAGGGGGAAGTCCCTTATAAAACTATCAGATTTCGTGAGACTTATTTCCTACCATGAGAACAATGTGGGGAAACCTCCCCAATGATTCATTTACCTCCCGCGGGGTCCCTCCCTCCGCATGTGGGGATTATGGGAACTACAATTTAAGGTAAGATATGAGTGGGGACACAGCCAAACCATATCACTCTAATTAGGGCTAACTCATTCTTTGGTGGTTGTTCTCTGTGACTCTTTGTTCTGCCCTCTAGGTACTTTGTTCCACCATTTGTATTATCCTTTTTTTTTTCTTTTAGAAAAATGAGTTTCAACTTAATTGTCTTCTAAGCCTGCTTCCTGCCTATAATGTTTGACATCCAAAAACCGATTTTCATTTTGAACTTTCTCTGTATCATGTTGCCCAAATTGGTGGTGCTTCTGCCAGATCAATTCTTTTAAAAAACGTTGTGGGTTTTCTATAACTCTTTCTAAGGTTCACTCTGTTAGACAAAAACTACTCCCACCCATCTTTTTGAGATAAGCCTTTCTCTCCCTTGGGCTTTCTGTGAGGGGGCTGTGGGATAATGCTGTGAAGATTCTTAGAATACCTATTATTTAATGAATATGAGCCAGTAACCATGTCCTTAAGATGCATAAAGGGGCTTTTGTTTATCTGAATGCTGCTATGTGACAGTATCTTAAAGTATATTACAGTCCCTCCTGATATTCAATCTTTGGTTTGAGGCCCTTTCCTAATTTGAGAATAATTCACTGTTGGGAGAAATTGTGGATGAGAAACAGTTTCATTTTCTAATCCAGCATGTCCTGACTCCTTTATATTTTCATATTTAACAGTTTATTCTTTAATTCATCTCCTTCCTCTGGAATTTTATCATAGGCAGCAGAAAGAATCCAGGTAGTACTTTCAATATTCTGCAATAGCTAGATTATTCAGTTCAATAGATGTTGTATATTTCCTATTTTCCACATTACTGTGGACATTGTGAAGTTTTCTATAAAGGGTTCATTTCCTCTTACTTCCCTTGATATTTTTTCCACTTCCCTTTAGGCCCTTAAAAATAACATCCCTGAAGTTGAGGCCTTTCAAGCTTTCACTAGCAGTCTTCTTAAGGCCCCTCCAGCTTCTGCTCACTAACTGGTTCCAAAACCATTGGCACATATTTGAACTTTTATTATGGCAGCATCTCATCTCTGGTATCAAAATATTAATACTTCTGTTTTGCTAAGTAGCAAACCAGCATAAAACTTGGTGGCTTTAAAATATTACAGTAATTAATTTTGTTCATTAATTTAAACATTGGGCAAGTCTCTGTATAGAAAGATCTTTTCTGTTACACATAGTATCAGCTGGGATCACTCATTTGGGGTTGGAGAGTTCACGGTGGCTCATTAATAAAGCTGGCAAGTTGATGCTGGCTTAATTCAACAAGTAACATCACAATAGCCCAATAATTTTTTCATATACATATGTCATAATACTGGTAATAATAGAAAACAGTGATAGAGAGCTTACCTTTTGATAGAGGCCACACACAACTGATCTCATTGAATCTTTTTTTTTAAATATTAAAAAATGTTTATTGAGTGCATCCATCAGCCATTCTTTTATGGCTTGTAGTTTTCCTGTCTTGACAATCTCCTTCACTGAAGATCAAACTAACCTTTTAATATTTTCATTTATTTTACTTTTTTAAAAAAATTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACAACGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCAACCATTAACTCATCATTTAACATTAGGTATATCTCCTAATGCTATCACTCCCCCCTTCCCCCACCCCACAACAGGCCCCAGAGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTTGGTTTTTTGTCCTTGCCATAGTTTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCTACAAAGGACATGAACTCATCCTTTTTTATGGCTGCATAGTATTCCATGGTATATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGCTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGTAATAAACATACATGTGCATGTGTCTTTATAGCAGCATGATTTGTAATCCTTTGGGTATATGCCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACATTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAGAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGTCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCACGTGTCTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTCTTTCTTGTAAATTTGTTTGAGTTCATTATAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGATTGCAAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGTTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGTTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGATCTAACATTTAAATCTTTAATCCATTTTGAATTAATTTTAGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGTTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATGCTTTCCCCATTTCTTGTTTTTGTCAGGTTTGTCAAAGATCTGATAGTTGTATATACGCAGCATTATTTCTGAGGGCTGTGTTCTGTTCCATTGGTCTATATCTCTGCTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTGGAGTTTGAAGTCAGGTAGCGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGG	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_5535:HG4_10X_allpass_1966:HG2_10X_allpass_1696:HG3_PB_pbsv_9867:HG2_Ill_tnscope_1160:HG4_PB_SVrefine2PBcRDovetail_5086:HG4_Ill_SVrefine2DISCOVARDovetail_7326:HG3_PB_assemblyticsfalcon_27457:HG3_PB_SVrefine2PBcRDovetail_4668:HG3_Ill_SVrefine2DISCOVARDovetail_7551:HG2_PB_SVrefine2PBcRplusDovetail_11480:HG2_PB_SVrefine2PB10Xhap12_7408:HG2_PB_SVrefine2Falcon2Bionano_4799:HG2_PB_SVrefine2Falcon1plusDovetail_12277:HG2_PB_PB10Xdip_31160:HG2_PB_PB10Xdip_31159:HG2_Ill_SVrefine2DISCOVARplusDovetail_13443:HG2_10X_SVrefine210Xhap12_7248:HG4_PB_pbsv_10158:HG2_PB_pbsv_10135:HG2_Ill_breakscan11_1471:HG4_PB_HySA_14744:HG3_10X_allpass_2038:HG2_Ill_MetaSV_5309:HG3_Ill_MetaSV_5490:HG2_PB_assemblyticsfalcon_27535:HG2_PB_assemblyticsPBcR_26802:HG4_Ill_Krunchall_14259:HG3_Ill_Krunchall_13717:HG2_Ill_Krunchall_14020;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7248:HG2_Ill_SVrefine2DISCOVARplusDovetail_13443:HG2_PB_PB10Xdip_31159:HG2_PB_PB10Xdip_31160:HG2_PB_SVrefine2Falcon1plusDovetail_12277:HG2_PB_SVrefine2Falcon2Bionano_4799:HG2_PB_SVrefine2PB10Xhap12_7408:HG2_PB_SVrefine2PBcRplusDovetail_11480:HG3_Ill_SVrefine2DISCOVARDovetail_7551:HG3_PB_SVrefine2PBcRDovetail_4668:HG3_PB_assemblyticsfalcon_27457:HG4_Ill_SVrefine2DISCOVARDovetail_7326:HG4_PB_SVrefine2PBcRDovetail_5086;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0251501;ClusterMaxSizeDiff=0.0251501;ClusterMaxEditDist=0.0251501;PBcalls=15;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-7816;DistBack=27761;DistForward=23744;DistMin=23744;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=9:22496528-22504344;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9999;PctRecOverlap=0.9999;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:79:./.:1:3:1:8:./.:0:0:0:0:1/1:0:42:1/1:0:443:7796:.:.
chr9	22999487	HG2_PB_SVrefine2Falcon2Bionano_4801	TAAAAAATTTGAATGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1472:HG4_Ill_Krunchall_14264:HG3_Ill_Krunchall_13721:HG2_PB_pbsv_10137:HG2_Ill_Krunchall_14027:HG4_PB_assemblyticsfalcon_26971:HG2_PB_assemblyticsfalcon_27540:HG3_PB_assemblyticsfalcon_27463:HG3_PB_HySA_15174:HG2_PB_HySA_18292:HG2_Ill_Spiral_720:HG4_PB_pbsv_10161:HG3_PB_pbsv_9870:HG4_Ill_MetaSV_5537:HG3_Ill_MetaSV_5492:HG2_Ill_tnscope_1161:HG2_Ill_MetaSV_5311:HG4_PB_SVrefine2PBcRDovetail_5088:HG4_PB_SVrefine2Falcon1Dovetail_6229:HG4_PB_HySA_14749:HG4_Ill_svaba_12809:HG4_Ill_scalpel_9418:HG4_Ill_SVrefine2DISCOVARDovetail_7328:HG4_Ill_GATKHCSBGrefine_7010:HG4_10X_allpass_1968:HG3_PB_SVrefine2PBcRDovetail_4670:HG3_Ill_svaba_12868:HG3_Ill_scalpel_9806:HG3_Ill_SVrefine2DISCOVARDovetail_7554:HG3_Ill_GATKHCSBGrefine_6769:HG3_10X_allpass_2039:HG2_PB_assemblyticsPBcR_26807:HG2_PB_SVrefine2PBcRplusDovetail_11482:HG2_PB_SVrefine2PB10Xhap12_7410:HG2_PB_SVrefine2Falcon2Bionano_4801:HG2_PB_SVrefine2Falcon1plusDovetail_12279:HG2_Ill_svaba_12729:HG2_Ill_scalpel_9683:HG2_Ill_manta_2900:HG2_Ill_SVrefine2DISCOVARplusDovetail_13447:HG2_Ill_GATKHCSBGrefine_6873:HG2_10X_allpass_1698:HG2_10X_SVrefine210Xhap12_7250;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7250:HG2_10X_allpass_1698:HG2_Ill_GATKHCSBGrefine_6873:HG2_Ill_SVrefine2DISCOVARplusDovetail_13447:HG2_Ill_manta_2900:HG2_Ill_scalpel_9683:HG2_Ill_svaba_12729:HG2_PB_SVrefine2Falcon1plusDovetail_12279:HG2_PB_SVrefine2Falcon2Bionano_4801:HG2_PB_SVrefine2PB10Xhap12_7410:HG2_PB_SVrefine2PBcRplusDovetail_11482:HG2_PB_assemblyticsPBcR_26807:HG3_10X_allpass_2039:HG3_Ill_GATKHCSBGrefine_6769:HG3_Ill_SVrefine2DISCOVARDovetail_7554:HG3_Ill_scalpel_9806:HG3_Ill_svaba_12868:HG3_PB_SVrefine2PBcRDovetail_4670:HG4_10X_allpass_1968:HG4_Ill_GATKHCSBGrefine_7010:HG4_Ill_SVrefine2DISCOVARDovetail_7328:HG4_Ill_scalpel_9418:HG4_Ill_svaba_12809:HG4_PB_HySA_14749:HG4_PB_SVrefine2Falcon1Dovetail_6229:HG4_PB_SVrefine2PBcRDovetail_5088;NumExactMatchSVs=26;ClusterMaxShiftDist=0.095092;ClusterMaxSizeDiff=0.095092;ClusterMaxEditDist=0.095092;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=41254;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=9:22999488-22999835;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4148.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:68:1/1:0:45:0:27:./.:0:0:0:0:1/1:0:50:0/1:2:12:.:.:.
chr9	23075112	HG3_10X_allpass_2040	TAAAATTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_10162:HG2_PB_HySA_18293:HG2_PB_PB10Xdip_31163:HG2_PB_PB10Xdip_31162:HG2_Ill_manta_2901:HG2_Ill_SVrefine2DISCOVARplusDovetail_13449:HG2_10X_allpass_1699:HG2_PB_pbsv_10138:HG4_Ill_Krunchall_14265:HG3_Ill_Krunchall_13722:HG2_Ill_Krunchall_14028:HG4_PB_assemblyticsfalcon_26972:HG2_PB_assemblyticsfalcon_27541:HG2_PB_assemblyticsPBcR_26808:HG3_PB_assemblyticsfalcon_27464:HG4_Ill_MetaSV_5538:HG3_Ill_MetaSV_5493:HG2_Ill_MetaSV_5312:HG3_PB_pbsv_9871:HG2_Ill_tnscope_1162:HG4_PB_SVrefine2PBcRDovetail_5089:HG4_PB_SVrefine2Falcon1Dovetail_6230:HG4_Ill_SVrefine2DISCOVARDovetail_7329:HG4_10X_allpass_1969:HG3_PB_SVrefine2PBcRDovetail_4671:HG3_Ill_SVrefine2DISCOVARDovetail_7555:HG3_10X_allpass_2040:HG2_PB_SVrefine2PBcRplusDovetail_11483:HG2_PB_SVrefine2PB10Xhap12_7411:HG2_PB_SVrefine2Falcon2Bionano_4802:HG2_PB_SVrefine2Falcon1plusDovetail_12280:HG2_Ill_SVrefine2DISCOVARplusDovetail_13448:HG2_10X_SVrefine210Xhap12_7251;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7251:HG2_Ill_SVrefine2DISCOVARplusDovetail_13448:HG2_PB_SVrefine2Falcon1plusDovetail_12280:HG2_PB_SVrefine2Falcon2Bionano_4802:HG2_PB_SVrefine2PB10Xhap12_7411:HG2_PB_SVrefine2PBcRplusDovetail_11483:HG3_10X_allpass_2040:HG3_Ill_SVrefine2DISCOVARDovetail_7555:HG3_PB_SVrefine2PBcRDovetail_4671:HG4_10X_allpass_1969:HG4_Ill_SVrefine2DISCOVARDovetail_7329:HG4_PB_SVrefine2Falcon1Dovetail_6230:HG4_PB_SVrefine2PBcRDovetail_5089;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0540541;PBcalls=17;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=67106;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=9:23075113-23075436;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4149.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:1:25:0:16:./.:0:0:0:0:1/1:0:33:./.:2:13:.:.:.
chr9	25776879	HG4_Ill_GATKHC_16431	GGCAAGAGGTAATGTAACCGAACGGTACAGACAGTAGAAAAGATGGTTAGAAAACTGATAATATTGGAAT	G	20	PASS	ClusterIDs=HG3_PB_HySA_15212:HG4_PB_HySA_14776:HG2_PB_HySA_18323:HG3_PB_pbsv_9886:HG2_PB_pbsv_10147:HG4_PB_pbsv_10171:HG4_PB_SVrefine2Falcon1Dovetail_6236:HG4_Ill_svaba_12833:HG4_Ill_SVrefine2DISCOVARDovetail_7339:HG4_Ill_Krunchall_14286:HG4_Ill_GATKHC_16431:HG4_Ill_GATKHCSBGrefine_7020:HG4_Ill_250bpfermikitraw_13626:HG3_PB_SVrefine2PBcRDovetail_4678:HG3_Ill_svaba_12895:HG3_Ill_scalpel_9825:HG3_Ill_manta_2372:HG3_Ill_SVrefine2DISCOVARDovetail_7567:HG3_Ill_Krunchall_13747:HG3_Ill_GATKHCSBGrefine_6785:HG3_Ill_250bpfermikitraw_13346:HG2_PB_SVrefine2PBcRplusDovetail_11487:HG2_PB_SVrefine2PB10Xhap12_7415:HG2_PB_SVrefine2Falcon2Bionano_4806:HG2_PB_SVrefine2Falcon1plusDovetail_12284:HG2_Ill_svaba_12749:HG2_Ill_scalpel_9701:HG2_Ill_manta_2904:HG2_Ill_SVrefine2DISCOVARplusDovetail_13460:HG2_Ill_Krunchall_14051:HG2_Ill_GATKHCSBGrefine_6885:HG2_Ill_250bpfermikitraw_13731:HG2_10X_SVrefine210Xhap12_7258;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7258:HG2_Ill_250bpfermikitraw_13731:HG2_Ill_GATKHCSBGrefine_6885:HG2_Ill_Krunchall_14051:HG2_Ill_SVrefine2DISCOVARplusDovetail_13460:HG2_Ill_manta_2904:HG2_Ill_scalpel_9701:HG2_Ill_svaba_12749:HG2_PB_SVrefine2Falcon1plusDovetail_12284:HG2_PB_SVrefine2Falcon2Bionano_4806:HG2_PB_SVrefine2PB10Xhap12_7415:HG2_PB_SVrefine2PBcRplusDovetail_11487:HG3_Ill_250bpfermikitraw_13346:HG3_Ill_GATKHCSBGrefine_6785:HG3_Ill_Krunchall_13747:HG3_Ill_SVrefine2DISCOVARDovetail_7567:HG3_Ill_manta_2372:HG3_Ill_scalpel_9825:HG3_Ill_svaba_12895:HG3_PB_SVrefine2PBcRDovetail_4678:HG4_Ill_250bpfermikitraw_13626:HG4_Ill_GATKHCSBGrefine_7020:HG4_Ill_GATKHC_16431:HG4_Ill_Krunchall_14286:HG4_Ill_SVrefine2DISCOVARDovetail_7339:HG4_Ill_svaba_12833:HG4_PB_SVrefine2Falcon1Dovetail_6236;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0285714;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.0719424;PBcalls=12;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-69;DistBack=83375;DistForward=-18;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=76;REFWIDENED=9:25776880-25777024;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:2:32:1:30:./.:0:0:0:0:1/1:0:40:./.:.:.:.:.:.
chr9	26512927	HG2_10X_SVrefine210Xhap12_7260	TTCAAGCATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5315:HG4_10X_allpass_1972:HG2_10X_allpass_1700:HG3_10X_allpass_2043:HG4_PB_assemblyticsfalcon_26999:HG3_PB_assemblyticsfalcon_27493:HG4_Ill_MetaSV_5543:HG2_Ill_MetaSV_5316:HG3_Ill_Spiral_10745:HG2_Ill_Spiral_721:HG4_PB_HySA_14783:HG4_PB_pbsv_10174:HG4_PB_SVrefine2Falcon1Dovetail_6240:HG4_Ill_scalpel_9440:HG4_Ill_manta_2472:HG4_Ill_GATKHCSBGrefine_7023:HG3_PB_pbsv_9889:HG3_PB_SVrefine2PBcRDovetail_4681:HG3_PB_HySA_15221:HG3_Ill_scalpel_9828:HG3_Ill_manta_2374:HG3_Ill_SVrefine2DISCOVARDovetail_7569:HG3_Ill_GATKHCSBGrefine_6790:HG2_PB_pbsv_10150:HG2_PB_SVrefine2Falcon2Bionano_4809:HG2_Ill_scalpel_9704:HG2_Ill_manta_2906:HG2_Ill_GATKHCSBGrefine_6888:HG2_10X_SVrefine210Xhap12_7260:HG4_Ill_MetaSV_5542:HG3_Ill_MetaSV_5497:HG2_Ill_tnscope_1163:HG2_Ill_breakscan11_1473;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7260:HG2_Ill_GATKHCSBGrefine_6888:HG2_Ill_manta_2906:HG2_Ill_scalpel_9704:HG2_PB_SVrefine2Falcon2Bionano_4809:HG2_PB_pbsv_10150:HG3_Ill_GATKHCSBGrefine_6790:HG3_Ill_SVrefine2DISCOVARDovetail_7569:HG3_Ill_manta_2374:HG3_Ill_scalpel_9828:HG3_PB_HySA_15221:HG3_PB_SVrefine2PBcRDovetail_4681:HG3_PB_pbsv_9889:HG4_Ill_GATKHCSBGrefine_7023:HG4_Ill_manta_2472:HG4_Ill_scalpel_9440:HG4_PB_SVrefine2Falcon1Dovetail_6240:HG4_PB_pbsv_10174;NumExactMatchSVs=18;ClusterMaxShiftDist=0.181543;ClusterMaxSizeDiff=0.181543;ClusterMaxEditDist=0.181543;PBcalls=10;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=2439;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=9:26512928-26513253;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:28:0|1:41:1:0:27:./.:0:0:0:0:0/1:19:13:0/1:20:9:.:.:.
chr9	27420861	HG4_Ill_scalpel_9442	GTGCAGCAAAATCTCACAAATCACCACTAAAGAACTTACTCATGTAACCAAATACCACCTA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_27574:HG2_PB_HySA_18337:HG3_PB_pbsv_9892:HG3_PB_HySA_15225:HG4_Ill_svaba_12841:HG4_Ill_scalpel_9442:HG4_Ill_Krunchall_14295:HG4_Ill_GATKHC_16445:HG4_Ill_GATKHCSBGrefine_7025:HG4_Ill_250bpfermikitraw_13636:HG4_Ill_150bpfermikitraw_13063:HG4_CG_vcfBeta_6532:HG3_Ill_svaba_12915:HG3_Ill_manta_2376:HG3_Ill_Krunchall_13757:HG3_Ill_GATKHC_16385:HG3_Ill_GATKHCSBGrefine_6794:HG3_Ill_250bpfermikitraw_13361:HG3_Ill_150bpfermikitraw_12954:HG3_CG_vcfBeta_5533:HG3_10X_allpass_2045:HG2_PB_pbsv_10152:HG2_Ill_svaba_12763:HG2_Ill_scalpel_9707:HG2_Ill_manta_2908:HG2_Ill_breakscan11_1474:HG2_Ill_SpiralSDKrefine_17661:HG2_Ill_Krunchall_14060:HG2_Ill_GATKHC_16428:HG2_Ill_GATKHCSBGrefine_6891:HG2_Ill_250bpfermikitraw_13744:HG2_Ill_150bpfermikitraw_12911:HG2_CG_vcfBeta_5801:HG2_10X_allpass_1701:HG4_Ill_Spiral_836;NumClusterSVs=35;ExactMatchIDs=HG2_10X_allpass_1701:HG2_CG_vcfBeta_5801:HG2_Ill_150bpfermikitraw_12911:HG2_Ill_250bpfermikitraw_13744:HG2_Ill_GATKHCSBGrefine_6891:HG2_Ill_GATKHC_16428:HG2_Ill_Krunchall_14060:HG2_Ill_SpiralSDKrefine_17661:HG2_Ill_breakscan11_1474:HG2_Ill_manta_2908:HG2_Ill_scalpel_9707:HG2_Ill_svaba_12763:HG2_PB_pbsv_10152:HG3_10X_allpass_2045:HG3_CG_vcfBeta_5533:HG3_Ill_150bpfermikitraw_12954:HG3_Ill_250bpfermikitraw_13361:HG3_Ill_GATKHCSBGrefine_6794:HG3_Ill_GATKHC_16385:HG3_Ill_Krunchall_13757:HG3_Ill_manta_2376:HG3_Ill_svaba_12915:HG4_CG_vcfBeta_6532:HG4_Ill_150bpfermikitraw_13063:HG4_Ill_250bpfermikitraw_13636:HG4_Ill_GATKHCSBGrefine_7025:HG4_Ill_GATKHC_16445:HG4_Ill_Krunchall_14295:HG4_Ill_scalpel_9442:HG4_Ill_svaba_12841;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0330578;PBcalls=5;Illcalls=25;TenXcalls=2;CGcalls=3;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=3;HG2count=15;HG3count=11;HG4count=9;NumTechs=4;NumTechsExact=4;SVLEN=-60;DistBack=15769;DistForward=66208;DistMin=15769;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:27420860-27420923;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:46:./.:4:21:13:12:./.:0:0:0:0:0/1:26:14:./.:.:.:.:.:.
chr9	27670560	HG3_Ill_250bpfermikitraw_13362	GATTGCATTAAGTCGGGGTAGTAATTTTTTAGGTTTCGTGTGGCAGGGTTTATTTCTGAATATAGA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_10153:HG3_PB_HySA_15227:HG3_Ill_svaba_12916:HG3_Ill_scalpel_9833:HG3_Ill_manta_2377:HG3_Ill_Krunchall_13759:HG3_Ill_GATKHC_16386:HG3_Ill_GATKHCSBGrefine_6795:HG3_Ill_Cortex_3837:HG3_Ill_250bpfermikitraw_13362:HG3_Ill_150bpfermikitraw_12955:HG3_CG_vcfBeta_5534:HG3_10X_allpass_2046:HG2_Ill_svaba_12764:HG2_Ill_manta_2909:HG2_Ill_breakscan11_1475:HG2_Ill_Krunchall_14062:HG2_Ill_GATKHC_16429:HG2_Ill_GATKHCSBGrefine_6892:HG2_Ill_Cortex_9268:HG2_Ill_250bpfermikitraw_13745:HG2_Ill_150bpfermikitraw_12912:HG2_10X_allpass_1702:HG3_PB_pbsv_9893;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_1702:HG2_Ill_150bpfermikitraw_12912:HG2_Ill_250bpfermikitraw_13745:HG2_Ill_Cortex_9268:HG2_Ill_GATKHCSBGrefine_6892:HG2_Ill_GATKHC_16429:HG2_Ill_Krunchall_14062:HG2_Ill_breakscan11_1475:HG2_Ill_manta_2909:HG2_Ill_svaba_12764:HG3_10X_allpass_2046:HG3_CG_vcfBeta_5534:HG3_Ill_150bpfermikitraw_12955:HG3_Ill_250bpfermikitraw_13362:HG3_Ill_Cortex_3837:HG3_Ill_GATKHCSBGrefine_6795:HG3_Ill_GATKHC_16386:HG3_Ill_Krunchall_13759:HG3_Ill_manta_2377:HG3_Ill_scalpel_9833:HG3_Ill_svaba_12916;NumExactMatchSVs=21;ClusterMaxShiftDist=0.030303;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.151515;PBcalls=3;Illcalls=18;TenXcalls=2;CGcalls=1;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=1;HG2count=11;HG3count=13;HG4count=0;NumTechs=4;NumTechsExact=3;SVLEN=-65;DistBack=11209;DistForward=32272;DistMin=11209;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:27670559-27670627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:28:0|1:45:3:3:37:./.:0:0:0:0:0/1:39:25:./.:.:.:.:.:.
chr9	28584919	HG4_Ill_scalpel_9448	TGACTGCAAGAGATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCAC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1476:HG3_PB_HySA_15236:HG2_PB_pbsv_10156:HG3_PB_pbsv_9898:HG2_PB_HySA_18348:HG4_PB_pbsv_10183:HG4_PB_assemblyticsfalcon_27008:HG4_PB_SVrefine2Falcon1Dovetail_6245:HG4_PB_HySA_14799:HG4_Ill_svaba_12845:HG4_Ill_scalpel_9448:HG4_Ill_manta_2473:HG4_Ill_SVrefine2DISCOVARDovetail_7352:HG4_Ill_Krunchall_14303:HG4_Ill_GATKHC_16452:HG4_Ill_GATKHCSBGrefine_7028:HG4_Ill_250bpfermikitraw_13644:HG4_Ill_150bpfermikitraw_13071:HG4_CG_vcfBeta_6538:HG4_10X_allpass_1974:HG3_PB_SVrefine2PBcRDovetail_4683:HG3_Ill_svaba_12923:HG3_Ill_scalpel_9838:HG3_Ill_manta_2378:HG3_Ill_SVrefine2DISCOVARDovetail_7583:HG3_Ill_Krunchall_13768:HG3_Ill_GATKHC_16396:HG3_Ill_GATKHCSBGrefine_6802:HG3_Ill_250bpfermikitraw_13372:HG3_Ill_150bpfermikitraw_12964:HG3_CG_vcfBeta_5537:HG3_10X_allpass_2047:HG2_PB_SVrefine2PBcRplusDovetail_11492:HG2_PB_SVrefine2PB10Xhap12_7420:HG2_PB_SVrefine2Falcon2Bionano_4813:HG2_PB_SVrefine2Falcon1plusDovetail_12288:HG2_Ill_svaba_12769:HG2_Ill_scalpel_9713:HG2_Ill_manta_2910:HG2_Ill_SpiralSDKrefine_17670:HG2_Ill_SVrefine2DISCOVARplusDovetail_13470:HG2_Ill_Krunchall_14070:HG2_Ill_GATKHC_16443:HG2_Ill_GATKHCSBGrefine_6894:HG2_Ill_250bpfermikitraw_13755:HG2_Ill_150bpfermikitraw_12922:HG2_CG_vcfBeta_5806:HG2_10X_SVrefine210Xhap12_7261;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7261:HG2_CG_vcfBeta_5806:HG2_Ill_150bpfermikitraw_12922:HG2_Ill_250bpfermikitraw_13755:HG2_Ill_GATKHCSBGrefine_6894:HG2_Ill_GATKHC_16443:HG2_Ill_Krunchall_14070:HG2_Ill_SVrefine2DISCOVARplusDovetail_13470:HG2_Ill_SpiralSDKrefine_17670:HG2_Ill_manta_2910:HG2_Ill_scalpel_9713:HG2_Ill_svaba_12769:HG2_PB_SVrefine2Falcon1plusDovetail_12288:HG2_PB_SVrefine2Falcon2Bionano_4813:HG2_PB_SVrefine2PB10Xhap12_7420:HG2_PB_SVrefine2PBcRplusDovetail_11492:HG3_10X_allpass_2047:HG3_CG_vcfBeta_5537:HG3_Ill_150bpfermikitraw_12964:HG3_Ill_250bpfermikitraw_13372:HG3_Ill_GATKHCSBGrefine_6802:HG3_Ill_GATKHC_16396:HG3_Ill_Krunchall_13768:HG3_Ill_SVrefine2DISCOVARDovetail_7583:HG3_Ill_manta_2378:HG3_Ill_scalpel_9838:HG3_Ill_svaba_12923:HG3_PB_SVrefine2PBcRDovetail_4683:HG4_10X_allpass_1974:HG4_CG_vcfBeta_6538:HG4_Ill_150bpfermikitraw_13071:HG4_Ill_250bpfermikitraw_13644:HG4_Ill_GATKHCSBGrefine_7028:HG4_Ill_GATKHC_16452:HG4_Ill_Krunchall_14303:HG4_Ill_SVrefine2DISCOVARDovetail_7352:HG4_Ill_manta_2473:HG4_Ill_scalpel_9448:HG4_Ill_svaba_12845:HG4_PB_HySA_14799:HG4_PB_SVrefine2Falcon1Dovetail_6245:HG4_PB_assemblyticsfalcon_27008:HG4_PB_pbsv_10183;NumExactMatchSVs=43;ClusterMaxShiftDist=0.0215054;ClusterMaxSizeDiff=0.0215054;ClusterMaxEditDist=0.0217391;PBcalls=13;Illcalls=29;TenXcalls=3;CGcalls=3;PBexactcalls=9;Illexactcalls=28;TenXexactcalls=3;CGexactcalls=3;HG2count=19;HG3count=14;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-92;DistBack=23292;DistForward=-77;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=9:28584920-28585027;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:./.:0:0:0:0:./.:0:0:0:0:1/1:0:36:./.:.:.:.:.:.
chr9	29451726	HG2_Ill_GATKHCSBGrefine_6899	GAAGAATGCAGAAGACTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTAAAAAGACCAAATCTACGTCTGATTGGTGTACCTGA	G	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_6899:HG2_PB_pbsv_10160:HG3_PB_pbsv_9904:HG3_10X_allpass_2049:HG2_PB_SVrefine2PBcRplusDovetail_11494:HG2_PB_SVrefine2PB10Xhap12_7422;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_6899:HG3_10X_allpass_2049:HG2_PB_SVrefine2PBcRplusDovetail_11494:HG2_PB_SVrefine2PB10Xhap12_7422;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0106101;ClusterMaxSizeDiff=0.010582;ClusterMaxEditDist=0.0159151;PBcalls=4;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-189;DistBack=23034;DistForward=-189;DistMin=-189;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=193;REFWIDENED=9:29451727-29452108;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:27:0|1:35:2:2:27:./.:0:0:0:0:0/1:30:14:./.:.:.:.:.:.
chr9	29624691	HG2_PB_SVrefine2Falcon1plusDovetail_12290	TAAGCCTGGGTAGATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1477:HG4_10X_allpass_1975:HG2_PB_assemblyticsPBcR_26853:HG4_PB_assemblyticsfalcon_27013:HG3_PB_assemblyticsfalcon_27515:HG2_PB_assemblyticsfalcon_27588:HG4_Ill_Krunchall_14316:HG3_Ill_Krunchall_13777:HG2_Ill_Krunchall_14079:HG4_Ill_Krunchall_14315:HG2_Ill_Krunchall_14078:HG4_Ill_Spiral_837:HG3_Ill_Spiral_10769:HG2_Ill_Spiral_722:HG2_PB_pbsv_10162:HG4_PB_pbsv_10189:HG4_Ill_MetaSV_5547:HG3_PB_HySA_15247:HG3_Ill_MetaSV_5501:HG2_PB_HySA_18365:HG2_Ill_tnscope_1164:HG2_Ill_MetaSV_5319:HG4_PB_SVrefine2Falcon1Dovetail_6247:HG4_PB_HySA_14813:HG4_Ill_scalpel_9456:HG4_Ill_manta_2475:HG4_Ill_SVrefine2DISCOVARDovetail_7356:HG4_Ill_GATKHCSBGrefine_7033:HG3_PB_pbsv_9905:HG3_PB_SVrefine2PBcRDovetail_4684:HG3_Ill_scalpel_9848:HG3_Ill_manta_2380:HG3_Ill_SVrefine2DISCOVARDovetail_7587:HG3_Ill_GATKHCSBGrefine_6808:HG3_10X_allpass_2050:HG2_PB_SVrefine2PBcRplusDovetail_11495:HG2_PB_SVrefine2PB10Xhap12_7423:HG2_PB_SVrefine2Falcon2Bionano_4815:HG2_PB_SVrefine2Falcon1plusDovetail_12290:HG2_Ill_scalpel_9721:HG2_Ill_manta_2912:HG2_Ill_SVrefine2DISCOVARplusDovetail_13472:HG2_Ill_GATKHCSBGrefine_6900:HG2_10X_SVrefine210Xhap12_7263;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7263:HG2_Ill_GATKHCSBGrefine_6900:HG2_Ill_SVrefine2DISCOVARplusDovetail_13472:HG2_Ill_manta_2912:HG2_Ill_scalpel_9721:HG2_PB_SVrefine2Falcon1plusDovetail_12290:HG2_PB_SVrefine2Falcon2Bionano_4815:HG2_PB_SVrefine2PB10Xhap12_7423:HG2_PB_SVrefine2PBcRplusDovetail_11495:HG3_10X_allpass_2050:HG3_Ill_GATKHCSBGrefine_6808:HG3_Ill_SVrefine2DISCOVARDovetail_7587:HG3_Ill_manta_2380:HG3_Ill_scalpel_9848:HG3_PB_SVrefine2PBcRDovetail_4684:HG3_PB_pbsv_9905:HG4_Ill_GATKHCSBGrefine_7033:HG4_Ill_SVrefine2DISCOVARDovetail_7356:HG4_Ill_manta_2475:HG4_Ill_scalpel_9456:HG4_PB_HySA_14813:HG4_PB_SVrefine2Falcon1Dovetail_6247;NumExactMatchSVs=22;ClusterMaxShiftDist=0.111643;ClusterMaxSizeDiff=0.111643;ClusterMaxEditDist=0.111643;PBcalls=16;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-652;DistForward=1995;DistMin=-652;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=9:29624692-29625030;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:73:1/1:1:42:0:18:./.:0:0:0:0:1/1:0:44:./.:2:12:.:.:.
chr9	30345776	HG2_Ill_manta_2914	TAAAAAGTAATGTTGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7267:HG2_PB_assemblyticsfalcon_27601:HG3_Ill_Krunchall_13788:HG2_Ill_Krunchall_14088:HG2_PB_assemblyticsPBcR_26863:HG3_Ill_Spiral_10777:HG2_Ill_Spiral_723:HG2_PB_pbsv_10167:HG3_PB_assemblyticsfalcon_27526:HG3_PB_SVrefine2Falcon1Dovetail_6173:HG2_Ill_tnscope_1165:HG2_Ill_MetaSV_5320:HG4_PB_SVrefine2Falcon1Dovetail_6253:HG3_PB_pbsv_9911:HG3_Ill_manta_2384:HG3_Ill_SVrefine2DISCOVARDovetail_7590:HG3_Ill_MetaSV_5502:HG3_Ill_GATKHCSBGrefine_6814:HG3_10X_allpass_2053:HG2_PB_SVrefine2PBcRplusDovetail_11499:HG2_PB_SVrefine2PB10Xhap12_7427:HG2_PB_SVrefine2Falcon1plusDovetail_12294:HG2_Ill_manta_2914:HG2_Ill_breakscan11_1478:HG2_Ill_SVrefine2DISCOVARplusDovetail_13475:HG2_Ill_GATKHCSBGrefine_6905:HG2_10X_allpass_1703;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7267:HG4_PB_SVrefine2Falcon1Dovetail_6253:HG3_PB_pbsv_9911:HG3_Ill_manta_2384:HG3_Ill_SVrefine2DISCOVARDovetail_7590:HG3_Ill_MetaSV_5502:HG3_Ill_GATKHCSBGrefine_6814:HG3_10X_allpass_2053:HG2_PB_SVrefine2PBcRplusDovetail_11499:HG2_PB_SVrefine2PB10Xhap12_7427:HG2_PB_SVrefine2Falcon1plusDovetail_12294:HG2_Ill_manta_2914:HG2_Ill_breakscan11_1478:HG2_Ill_SVrefine2DISCOVARplusDovetail_13475:HG2_Ill_GATKHCSBGrefine_6905:HG2_10X_allpass_1703;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0829346;ClusterMaxSizeDiff=0.0829346;ClusterMaxEditDist=0.0829346;PBcalls=10;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=45952;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=9:30345777-30346107;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:37:0|1:37:0:1:41:./.:0:0:0:0:0/1:21:17:0/1:16:6:.:.:.
chr9	30491283	HG3_Ill_GATKHCSBGrefine_6815	ACAAAAATAATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCCGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_10194:HG2_PB_assemblyticsfalcon_27602:HG2_PB_assemblyticsPBcR_26864:HG3_PB_assemblyticsfalcon_27527:HG4_Ill_Krunchall_14327:HG3_PB_pbsv_9912:HG3_Ill_Krunchall_13789:HG2_PB_pbsv_10168:HG2_Ill_Krunchall_14089:HG3_Ill_Spiral_10778:HG2_PB_HySA_18376:HG4_Ill_MetaSV_5548:HG3_Ill_MetaSV_5503:HG2_Ill_tnscope_1166:HG2_Ill_MetaSV_5321:HG4_PB_assemblyticsfalcon_27024:HG4_PB_SVrefine2Falcon1Dovetail_6254:HG4_Ill_svaba_12867:HG4_Ill_SVrefine2DISCOVARDovetail_7360:HG4_Ill_GATKHCSBGrefine_7038:HG4_10X_allpass_1976:HG3_PB_SVrefine2PBcRDovetail_4685:HG3_Ill_svaba_12944:HG3_Ill_scalpel_9855:HG3_Ill_manta_2385:HG3_Ill_SVrefine2DISCOVARDovetail_7592:HG3_Ill_GATKHCSBGrefine_6815:HG3_10X_allpass_2054:HG2_PB_SVrefine2PBcRplusDovetail_11500:HG2_PB_SVrefine2PB10Xhap12_7429:HG2_PB_SVrefine2Falcon2Bionano_4817:HG2_PB_SVrefine2Falcon1plusDovetail_12295:HG2_Ill_svaba_12786:HG2_Ill_scalpel_9730:HG2_Ill_manta_2915:HG2_Ill_SVrefine2DISCOVARplusDovetail_13477:HG2_Ill_GATKHCSBGrefine_6906:HG2_10X_allpass_1704:HG2_10X_SVrefine210Xhap12_7268:HG2_Ill_breakscan11_1479;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7268:HG2_10X_allpass_1704:HG2_Ill_GATKHCSBGrefine_6906:HG2_Ill_SVrefine2DISCOVARplusDovetail_13477:HG2_Ill_manta_2915:HG2_Ill_scalpel_9730:HG2_Ill_svaba_12786:HG2_PB_SVrefine2Falcon1plusDovetail_12295:HG2_PB_SVrefine2Falcon2Bionano_4817:HG2_PB_SVrefine2PB10Xhap12_7429:HG2_PB_SVrefine2PBcRplusDovetail_11500:HG3_10X_allpass_2054:HG3_Ill_GATKHCSBGrefine_6815:HG3_Ill_SVrefine2DISCOVARDovetail_7592:HG3_Ill_manta_2385:HG3_Ill_scalpel_9855:HG3_Ill_svaba_12944:HG3_PB_SVrefine2PBcRDovetail_4685:HG4_10X_allpass_1976:HG4_Ill_GATKHCSBGrefine_7038:HG4_Ill_SVrefine2DISCOVARDovetail_7360:HG4_Ill_svaba_12867:HG4_PB_SVrefine2Falcon1Dovetail_6254:HG4_PB_assemblyticsfalcon_27024;NumExactMatchSVs=24;ClusterMaxShiftDist=0.095082;ClusterMaxSizeDiff=0.095082;ClusterMaxEditDist=0.095082;PBcalls=14;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=126;DistForward=2246;DistMin=126;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=9:30491299-30501035;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4159.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:1:40:3:23:./.:0:0:0:0:1/1:0:40:./.:1:15:.:.:.
chr9	31291355	HG4_10X_allpass_1977	TCTAAGGCACCACCTAACAGTTTATCTCCTGGCTCTCAGTCCAAATTATAACACAAAAGTATTTTGCCAATATACATCACCTGTGAAACCCACGACAAGAATGTAGCCACCACAAAGATCCTGTACAAAGTCATGACCCTCTCAAAACACCCAGAAATAAAAGCCAATTGACTGTACTCAATTTACACCCCAGTTAAAGGAACACTAAACCTCTCATATCAGAAAATCAGCACAAGAAATCTAGAAATTCAGAAAGTCAGACTGTTCCCTTACCTTCAAACAAGCACACTAGCTCCCCAACAATGGTTTCAAACCAGATTGAAATGGTTAAAATTACAGACAGAGAATTTAGAATCTGAATGGCAAGGAAGCTCATTGAGATTCAGAATGTTGAAACCCAATACAAGGAATCCAGTAAAATAATTCAAGATCTGAAAGATAAAATAGCCATTTTAAGAAAGAACAGAATAATTTCTGGCATGGAAAAATTCACTATAAGAATTTTATTTTACTGAAATTGGATGTATTAATAGCAGAATAGACCATCCTGAGGAAAGAATATCCAAGCTCAAAGACCAGTTTTTTGGGTCAATTTAGTGAGACAAAAATTTTAAGAAGAATTTTAAAAAATAAACAAAACATCCAAAAATATGGGATTATGTAAAGAGAATAAACCTATGACTCATTGGCATTCTTGAGAAAGACAGAGAATAAGCAACTAAGAAAATATATTTGAGGATACAGTCCATGAAGATTTTCCCAATATCACTAGAGGTTGACATGCAAATTCAACAAATACAGAAAACCACTGTGAGATGATACCATAGCAGGTGACCATCTGTAAGGCACATAGTCATCAGCTACACATAGGTCAATGCAAAGAAAAAAAATCTAAAGGCAGCTAGAGTGAAAGGGTAGGTCACTTACAAAGGGAACCCTATCAGGCTAACAGTGGACCTCCCAGCAGAAACTATACAAGCCAGAAAACATTGAAGGCCCATTTTCAGCAACCTTAAAGAAAATATATTCCAACCAAGAATTTTGTATCCCACCAAACTAAGCTTCATAAGTGAAGGAGAGATCAAATTATTTTCAAACAAACAAATGCTAATGGAATTCCTTACCACTAGACCAGCCTTAAACATGGACATAAAACAACAATAACTTCTACCACAAAAGCACACATAAACACATAGTCCACAGACACTATGAAGCAACTACACAATCAAGTCTGCAAAACAACCAGCTAACAAGATGATGACACGTTCAAAATGTCACATATCAATACTAACTGTGAATGTAAACAGTATAAAAGCCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_9915:HG2_10X_allpass_1705:HG2_Ill_tnscope_1167:HG4_PB_assemblyticsfalcon_27036:HG4_PB_SVrefine2Falcon1Dovetail_6258:HG4_Ill_SVrefine2DISCOVARDovetail_7361:HG4_Ill_MetaSV_5551:HG4_Ill_GATKHCSBGrefine_7042:HG4_10X_allpass_1977:HG3_PB_assemblyticsfalcon_27537:HG3_PB_SVrefine2PBcRDovetail_4687:HG3_Ill_MetaSV_5505:HG3_10X_allpass_2056:HG2_PB_pbsv_10171:HG2_PB_assemblyticsfalcon_27611:HG2_PB_assemblyticsPBcR_26871:HG2_PB_SVrefine2PBcRplusDovetail_11501:HG2_PB_SVrefine2PB10Xhap12_7430:HG2_PB_SVrefine2Falcon2Bionano_4818:HG2_PB_SVrefine2Falcon1plusDovetail_12297:HG2_Ill_SpiralSDKrefine_17690:HG2_Ill_SVrefine2DISCOVARplusDovetail_13479:HG2_Ill_MetaSV_5323:HG2_Ill_GATKHCSBGrefine_6909:HG2_10X_SVrefine210Xhap12_7269:HG4_PB_pbsv_10200:HG3_Ill_Krunchall_13801:HG2_Ill_breakscan11_1480;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7269:HG2_Ill_GATKHCSBGrefine_6909:HG2_Ill_MetaSV_5323:HG2_Ill_SVrefine2DISCOVARplusDovetail_13479:HG2_Ill_SpiralSDKrefine_17690:HG2_PB_SVrefine2Falcon1plusDovetail_12297:HG2_PB_SVrefine2Falcon2Bionano_4818:HG2_PB_SVrefine2PB10Xhap12_7430:HG2_PB_SVrefine2PBcRplusDovetail_11501:HG2_PB_assemblyticsPBcR_26871:HG2_PB_assemblyticsfalcon_27611:HG2_PB_pbsv_10171:HG3_10X_allpass_2056:HG3_Ill_MetaSV_5505:HG3_PB_SVrefine2PBcRDovetail_4687:HG3_PB_assemblyticsfalcon_27537:HG4_10X_allpass_1977:HG4_Ill_GATKHCSBGrefine_7042:HG4_Ill_MetaSV_5551:HG4_Ill_SVrefine2DISCOVARDovetail_7361:HG4_PB_SVrefine2Falcon1Dovetail_6258:HG4_PB_assemblyticsfalcon_27036;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00455927;ClusterMaxSizeDiff=0.00455927;ClusterMaxEditDist=0.00455927;PBcalls=13;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1317;DistBack=7912;DistForward=7612;DistMin=7612;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:31291356-31292673;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4160.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:44:1/1:2:19:0:17:./.:0:0:0:0:1/1:0:34:1/1:3:77:1414:.:.
chr9	33212923	HG3_PB_SVrefine2Falcon1Dovetail_6176	CACTTTGGGAGGCTGAGGCGGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGTCTGGCCAACATAGTGAAACCCCACCTCTACTAAAAATGCAAAAATTAGCCGGATGTGGTGGCGGGTGCCTGTAAGCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATAGCGCCACTGCACTCTAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAAATAAAAAAGAATGTTCACTTCTAACAAGTTCCCATGTATTGTTGATCCTGCTGGTCCAAGGATCACACTTTGAGAACCACTGATTTACCACAAGAAATTCTCAACCCTCAGTATGGTCAGTGCTTACTTATTAATTTATTCAGTGAATGTCTACTGAGGGCCTGCTATGTGCCAGACATGGACCAGGTGTTGAGTGTTCAATGGTAAGCAAAGCCCACATTGAACTTGCCCACATAGGACTTGCCTCTATGGAGCTTCCAGTCAACTATGGAAGACATATTAAGCAAATAAAAATACCATTAAGTATATAATAACAGGCCAGGAGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGTAGAGACAGAGGCTTGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAATATAGTGACACCTCGTCTCTACAAAAAATTTAAAAATTAGCCAAGCATGGTAGCACACACTTGGAGTCCTTGCTACTTAGGAGGCTGAGGTGGGAGGATAGCTTGAGCTCAGGAGGCAGAGGTGTACTGAGACAGCACTTACACTCCAGCCTGGGTGACAGAGTAAGACTCTATCTCAAAAAAGAAGTACATAAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7279:HG4_PB_SVrefine2PBcRDovetail_5100:HG2_10X_allpass_1706:HG3_10X_allpass_2059:HG2_PB_HySA_18416:HG2_PB_pbsv_10187:HG3_PB_pbsv_9932:HG2_Ill_MetaSV_5329:HG4_Ill_MetaSV_5560:HG4_Ill_GATKHCSBGrefine_7054:HG4_10X_allpass_1978:HG3_Ill_MetaSV_5512:HG3_Ill_GATKHCSBGrefine_6828:HG2_Ill_SpiralSDKrefine_17711:HG4_PB_pbsv_10218:HG2_Ill_tnscope_1168:HG4_PB_SVrefine2Falcon1Dovetail_6269:HG3_PB_SVrefine2Falcon1Dovetail_6176:HG3_Ill_SVrefine2DISCOVARDovetail_7607:HG2_PB_SVrefine2PB10Xhap12_7438:HG2_PB_SVrefine2Falcon2Bionano_4827:HG2_PB_SVrefine2Falcon1plusDovetail_12307;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7279:HG4_PB_SVrefine2Falcon1Dovetail_6269:HG3_PB_SVrefine2Falcon1Dovetail_6176:HG3_Ill_SVrefine2DISCOVARDovetail_7607:HG2_PB_SVrefine2PB10Xhap12_7438:HG2_PB_SVrefine2Falcon2Bionano_4827:HG2_PB_SVrefine2Falcon1plusDovetail_12307;NumExactMatchSVs=7;ClusterMaxShiftDist=0.27618;ClusterMaxSizeDiff=0.27618;ClusterMaxEditDist=0.27618;PBcalls=10;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-859;DistBack=37904;DistForward=-711;DistMin=-711;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=260;REFWIDENED=9:33212924-33214042;PctSeqSimilarity=0.9189;PctSizeSimilarity=1;PctRecOverlap=0.8291;SizeDiff=0;StartDistance=-147;EndDistance=-147;GTMatch=0;TruScore=91;MatchId=4161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:41:27:0|1:41:1:1:32:./.:0:0:0:0:0/0:68:2:0/1:77:20:792:.:.
chr9	33251884	HG2_PB_SVrefine2PB10Xhap12_7439	GAGAAGGGGTGCTCTCTCCCCTTCTCACGGGAGAAGAAGGGGTGCTCTCTCCCCTTCTCACGGGAGA	G	10	PASS	ClusterIDs=HG4_PB_pbsv_10219:HG2_PB_pbsv_10188:HG3_PB_pbsv_9933:HG2_PB_SVrefine2PBcRplusDovetail_11509:HG2_PB_SVrefine2PB10Xhap12_7439;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7439:HG2_PB_SVrefine2PBcRplusDovetail_11509;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.030303;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-66;DistBack=-1;DistForward=-67;DistMin=-67;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=300;REFWIDENED=9:33251885-33252250;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:3:40:1:18:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr9	33423361	HG2_PB_SVrefine2Falcon1plusDovetail_12308	TAAGAATCTAGTTTTTCGGCCGCCCCTACTGGGAGGTGAGGAGCCCCTCTGCCCAGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGCGGCGGGGGGGGTCGGCCAGCCGCCCCGTCCGGGAGGGGGGTGGAGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGTGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCCGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTGAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTGAACAGATGCTTGAAGGCAGCATGCTCGTTGAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACACTGCGGAAGGCAGCGGGGTCCTCTGCCTAGGAGAACCAGAGACCTTTGTTCGCTTGTTTGTCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCTTCTGCGAGAAACACCCAAGAATGATCAATTAAAAAAAAAAAAACAAAAAAACAAATATTTACGTATGATAATGAGAAGAACACTGTCCTAGATGGCTGAAATGCTAATAGTCTTTAATTCACTATTTTCTTATTCTGACTGTTGCAAAGATTTGTAGTTTTATTGATGATTCTCACTCATGTTCTAAAATAGGAGTTGGCAAACTATTGGCTGCCTGTGTTTATGAATAAAGTTTTCCTAGAACACAACAACAAAAAAAAAACAAACAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_14864:HG2_10X_allpass_1707:HG4_10X_allpass_1980:HG3_10X_allpass_2060:HG2_PB_assemblyticsPBcR_26891:HG4_PB_assemblyticsfalcon_27059:HG2_PB_pbsv_10189:HG3_PB_HySA_15290:HG4_PB_pbsv_10220:HG2_PB_HySA_18417:HG2_Ill_tnscope_1169:HG4_PB_SVrefine2Falcon1Dovetail_6270:HG4_Ill_SVrefine2DISCOVARDovetail_7375:HG4_Ill_MetaSV_5561:HG4_Ill_GATKHCSBGrefine_7055:HG3_PB_pbsv_9934:HG3_PB_assemblyticsfalcon_27559:HG3_Ill_MetaSV_5513:HG2_PB_assemblyticsfalcon_27634:HG2_PB_SVrefine2PBcRplusDovetail_11510:HG2_PB_SVrefine2PB10Xhap12_7440:HG2_PB_SVrefine2Falcon2Bionano_4828:HG2_PB_SVrefine2Falcon1plusDovetail_12308:HG2_Ill_SVrefine2DISCOVARplusDovetail_13492:HG2_Ill_GATKHCSBGrefine_6921:HG2_10X_SVrefine210Xhap12_7281:HG2_Ill_breakscan11_1481:HG2_Ill_MetaSV_5330;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7281:HG2_Ill_GATKHCSBGrefine_6921:HG2_Ill_SVrefine2DISCOVARplusDovetail_13492:HG2_PB_SVrefine2Falcon1plusDovetail_12308:HG2_PB_SVrefine2Falcon2Bionano_4828:HG2_PB_SVrefine2PB10Xhap12_7440:HG2_PB_SVrefine2PBcRplusDovetail_11510:HG2_PB_assemblyticsfalcon_27634:HG3_Ill_MetaSV_5513:HG3_PB_assemblyticsfalcon_27559:HG3_PB_pbsv_9934:HG4_Ill_GATKHCSBGrefine_7055:HG4_Ill_MetaSV_5561:HG4_Ill_SVrefine2DISCOVARDovetail_7375:HG4_PB_SVrefine2Falcon1Dovetail_6270;NumExactMatchSVs=15;ClusterMaxShiftDist=0.180193;ClusterMaxSizeDiff=0.180193;ClusterMaxEditDist=0.180193;PBcalls=15;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1293;DistBack=17893;DistForward=29886;DistMin=17893;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=9:33423362-33424669;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:41:1/1:1:10:0:13:./.:0:0:0:0:1/1:0:19:1/1:3:77:1228:.:.
chr9	34274428	HG2_10X_SVrefine210Xhap12_7284	AATGGATAGGCCAGGTGCAGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGCATCACCTGAGGTCAAGAGTTTGAGACCAGCCTGACCAATATGATGAAACCCCGTCTGTACTAAAAATAGAACAATTAGCCAGGCGTGGTGGCACATGCCTGTAATCCCAGCTACATGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCAACATTGCACGCCAGCTTGAACAACAAGAGCAAAATCTGTCTCCAAAGAAAAAAAAAAAGAGTAAAGTGAAAGAACTTAAACAAGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7284:HG2_PB_SVrefine2PB10Xhap12_7444:HG4_Ill_GATKHCSBGrefine_7061:HG3_Ill_GATKHCSBGrefine_6831:HG2_Ill_GATKHCSBGrefine_6925:HG2_PB_PB10Xdip_31289:HG2_Ill_SpiralSDKrefine_17715:HG4_PB_SVrefine2Falcon1Dovetail_6272:HG3_PB_assemblyticsfalcon_27567:HG2_PB_SVrefine2PB10Xhap12_7443:HG2_Ill_manta_2921:HG4_Ill_scalpel_9500:HG3_PB_pbsv_9940:HG3_Ill_scalpel_9894:HG2_PB_pbsv_10195:HG2_Ill_scalpel_9761:HG4_PB_pbsv_10225:HG2_PB_assemblyticsfalcon_27645:HG4_Ill_MetaSV_5563:HG2_PB_assemblyticsPBcR_26902:HG2_PB_HySA_18433:HG3_PB_HySA_15306:HG2_PB_SVrefine2PBcRplusDovetail_11513:HG2_PB_SVrefine2Falcon2Bionano_4830:HG2_PB_SVrefine2Falcon1plusDovetail_12312;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7284:HG3_PB_HySA_15306:HG2_PB_SVrefine2PBcRplusDovetail_11513:HG2_PB_SVrefine2Falcon2Bionano_4830:HG2_PB_SVrefine2Falcon1plusDovetail_12312;NumExactMatchSVs=5;ClusterMaxShiftDist=0.254181;ClusterMaxSizeDiff=0.254181;ClusterMaxEditDist=0.254181;PBcalls=15;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-332;DistBack=11754;DistForward=-326;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=9:34274429-34274766;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.997;PctRecOverlap=0.982;SizeDiff=-1;StartDistance=-5;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=4164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:35:0|1:24:2:1:30:./.:0:0:0:0:0/1:17:7:0/1:31:5:.:.:.
chr9	36008969	HG2_Ill_manta_2922	GCACATTTCTGCCTTTTGCCGCTAGAGGATGCACTCCCAGAGGGCATGGACCCTGGGTTACTCTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7292:HG2_PB_HySA_18458:HG2_PB_pbsv_10207:HG3_PB_pbsv_9949:HG3_PB_HySA_15336:HG3_Ill_svaba_12999:HG3_Ill_scalpel_9908:HG3_Ill_manta_2390:HG3_Ill_Krunchall_13852:HG3_Ill_GATKHC_16490:HG3_Ill_GATKHCSBGrefine_6835:HG3_Ill_Cortex_3852:HG3_Ill_250bpfermikitraw_13450:HG3_Ill_150bpfermikitraw_13043:HG2_Ill_svaba_12840:HG2_Ill_manta_2922:HG2_Ill_breakscan11_1483:HG2_Ill_SpiralSDKrefine_17726:HG2_Ill_Krunchall_14143:HG2_Ill_GATKHC_16532:HG2_Ill_GATKHCSBGrefine_6931:HG2_Ill_Cortex_9293:HG2_Ill_250bpfermikitraw_13821:HG2_Ill_150bpfermikitraw_12988:HG3_Ill_SVrefine2DISCOVARDovetail_7618:HG2_PB_SVrefine2Falcon2Bionano_4836:HG2_PB_SVrefine2Falcon1plusDovetail_12320:HG2_Ill_SVrefine2DISCOVARplusDovetail_13504;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12988:HG2_Ill_250bpfermikitraw_13821:HG2_Ill_Cortex_9293:HG2_Ill_GATKHCSBGrefine_6931:HG2_Ill_GATKHC_16532:HG2_Ill_Krunchall_14143:HG2_Ill_SpiralSDKrefine_17726:HG2_Ill_breakscan11_1483:HG2_Ill_manta_2922:HG2_Ill_svaba_12840:HG3_Ill_150bpfermikitraw_13043:HG3_Ill_250bpfermikitraw_13450:HG3_Ill_Cortex_3852:HG3_Ill_GATKHCSBGrefine_6835:HG3_Ill_GATKHC_16490:HG3_Ill_Krunchall_13852:HG3_Ill_manta_2390:HG3_Ill_scalpel_9908:HG3_Ill_svaba_12999;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.0930233;PBcalls=6;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-64;DistBack=-17;DistForward=19136;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=64;REFWIDENED=9:36008922-36009049;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:28:./.:23:12:11:17:./.:0:0:0:0:0/1:24:39:./.:.:.:.:.:.
chr9	36309279	HG2_Ill_breakscan11_1484	TGTCAAGCATCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7293:HG2_PB_SVrefine2PB10Xhap12_7453:HG4_PB_SVrefine2PBcRDovetail_5108:HG4_Ill_MetaSV_5568:HG3_Ill_MetaSV_5519:HG2_Ill_MetaSV_5337:HG4_Ill_Krunchall_14384:HG4_PB_assemblyticsfalcon_27086:HG2_PB_PB10Xdip_31318:HG3_PB_assemblyticsfalcon_27591:HG4_PB_pbsv_10237:HG2_PB_HySA_18460:HG3_PB_pbsv_9950:HG2_Ill_tnscope_1170:HG2_Ill_MetaSV_5336:HG4_Ill_manta_2485:HG4_Ill_GATKHCSBGrefine_7070:HG4_10X_allpass_1982:HG3_Ill_SVrefine2DISCOVARDovetail_7621:HG3_Ill_GATKHCSBGrefine_6836:HG3_10X_allpass_2061:HG2_PB_pbsv_10208:HG2_Ill_breakscan11_1484:HG2_Ill_SpiralSDKrefine_17727:HG2_Ill_SVrefine2DISCOVARplusDovetail_13507:HG2_Ill_GATKHCSBGrefine_6932:HG2_10X_allpass_1708;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7293:HG4_Ill_manta_2485:HG4_Ill_GATKHCSBGrefine_7070:HG4_10X_allpass_1982:HG3_Ill_SVrefine2DISCOVARDovetail_7621:HG3_Ill_GATKHCSBGrefine_6836:HG3_10X_allpass_2061:HG2_PB_pbsv_10208:HG2_Ill_breakscan11_1484:HG2_Ill_SpiralSDKrefine_17727:HG2_Ill_SVrefine2DISCOVARplusDovetail_13507:HG2_Ill_GATKHCSBGrefine_6932:HG2_10X_allpass_1708;NumExactMatchSVs=13;ClusterMaxShiftDist=0.336667;ClusterMaxSizeDiff=0.336667;ClusterMaxEditDist=0.336667;PBcalls=9;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=20809;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=9:36309280-36309615;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:18:0|1:30:1:1:22:./.:0:0:0:0:0/1:20:25:0/1:35:10:.:.:.
chr9	36341804	HG2_Ill_GATKHCSBGrefine_6933	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_27665:HG3_PB_HySA_15338:HG4_Ill_svaba_12926:HG4_Ill_scalpel_9511:HG4_Ill_manta_2486:HG4_Ill_Krunchall_14386:HG4_Ill_GATKHC_16550:HG4_Ill_GATKHCSBGrefine_7072:HG4_Ill_250bpfermikitraw_13720:HG4_Ill_150bpfermikitraw_13143:HG3_Ill_svaba_13002:HG3_Ill_scalpel_9913:HG3_Ill_Krunchall_13856:HG3_Ill_GATKHC_16497:HG3_Ill_GATKHCSBGrefine_6838:HG3_Ill_250bpfermikitraw_13455:HG3_Ill_150bpfermikitraw_13047:HG2_PB_assemblyticsPBcR_26921:HG2_Ill_svaba_12842:HG2_Ill_scalpel_9776:HG2_Ill_Krunchall_14147:HG2_Ill_GATKHC_16536:HG2_Ill_GATKHCSBGrefine_6934:HG2_Ill_250bpfermikitraw_13825:HG2_Ill_150bpfermikitraw_12993:HG4_PB_assemblyticsfalcon_27088:HG4_Ill_svaba_12925:HG4_Ill_scalpel_9510:HG4_Ill_Krunchall_14385:HG4_Ill_GATKHC_16549:HG4_Ill_GATKHCSBGrefine_7071:HG4_Ill_250bpfermikitraw_13719:HG4_Ill_150bpfermikitraw_13142:HG3_PB_assemblyticsfalcon_27593:HG3_Ill_svaba_13001:HG3_Ill_scalpel_9912:HG3_Ill_manta_2391:HG3_Ill_GATKHC_16496:HG3_Ill_GATKHCSBGrefine_6837:HG3_Ill_250bpfermikitraw_13454:HG3_Ill_150bpfermikitraw_13046:HG2_Ill_svaba_12841:HG2_Ill_scalpel_9775:HG2_Ill_manta_2923:HG2_Ill_Krunchall_14146:HG2_Ill_GATKHC_16535:HG2_Ill_GATKHCSBGrefine_6933:HG2_Ill_250bpfermikitraw_13824:HG2_Ill_150bpfermikitraw_12992:HG3_Ill_Krunchall_13855:HG2_Ill_breakscan11_1485:HG4_PB_pbsv_10238:HG2_PB_pbsv_10209:HG3_PB_pbsv_9951;NumClusterSVs=54;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12992:HG2_Ill_250bpfermikitraw_13824:HG2_Ill_GATKHCSBGrefine_6933:HG2_Ill_GATKHC_16535:HG2_Ill_Krunchall_14146:HG2_Ill_manta_2923:HG2_Ill_scalpel_9775:HG2_Ill_svaba_12841:HG3_Ill_150bpfermikitraw_13046:HG3_Ill_250bpfermikitraw_13454:HG3_Ill_GATKHCSBGrefine_6837:HG3_Ill_GATKHC_16496:HG3_Ill_manta_2391:HG3_Ill_scalpel_9912:HG3_Ill_svaba_13001:HG3_PB_assemblyticsfalcon_27593:HG4_Ill_150bpfermikitraw_13142:HG4_Ill_250bpfermikitraw_13719:HG4_Ill_GATKHCSBGrefine_7071:HG4_Ill_GATKHC_16549:HG4_Ill_Krunchall_14385:HG4_Ill_scalpel_9510:HG4_Ill_svaba_12925:HG4_PB_assemblyticsfalcon_27088;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0854701;ClusterMaxSizeDiff=0.0854701;ClusterMaxEditDist=0.0854701;PBcalls=8;Illcalls=46;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=18;HG4count=17;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=18714;DistForward=407;DistMin=407;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:36341803-36341866;PctSeqSimilarity=0.9833;PctSizeSimilarity=0.9667;PctRecOverlap=0.9672;SizeDiff=2;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=97;MatchId=4167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:0:47:3:28:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr9	36362691	HG2_PB_SVrefine2PB10Xhap12_7454	GGCAATCTTGGCTCACTGCAACCTCCACATCCTGGGTTCAAGCCATTCTCCGGCCTCAGCCTTCCGAGTAGCTGGGACTATAGGCGTGCATCACCACACCCAGCTAATTTTTGTATTTTTAGTACAGATGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGTCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGGCACCACACCCGGCCCTAATCTGTTTTTCTTTATGGTTGAACCACTGAAGCTTGAACCCCAACCTAGTCTTTTGTTGGTTAAATACCTTTTCGCTGTCTTCACGGTGATTAATTGTTTCAGTCTATGAGACAGGGGTCTTGCTCTATCATCCATCCATCCATCCATCCATCCTTATCTACCTATGTATCTATCTATGAGATGGGGGTCTCACTCTGTCACCCAGGCTGAAGTACAATGGCACAATCACTTGGGCTCGAGGGATCCTCCAGCCTCCGCCTCCTAAGTAGATGGGACTACAGTGGAGCACCACAGTGAGAACTTTTGATGAATACAAACATTTCCAAAAAACAGACATAGAAAGCCACTATAAACAATCCTGTAGAAATTTTTTTGTGTGGACATATGCACTCAATTCTCTTGATTACACTAAGAATGGAATTGCTGGATTACTGGGTAGGTGTATGTTTGACATGATTAGAAACTGACCAACAGGTTTCCAAAAGATCATGCTACTTTTTACTTCCACTAGCAATAGAATTGTCAGTCTTTTTAATTTTGGCCCTCAAAATGTCATGTTTTCATTTGGTCACCCAACTGTCCCAGAACCACTTATTAGCAATTCTGTCTTGTTCCAACTCACCTACATTCATCAAGTCATATGCCATGTATATATACTCATGCGTGGCTTAACGATGGAGATACATTCTGAGAAATGTGTCATTAGGTGATTTCATTGTTGTACTAACATCATAGAGTGTACTTATACAAACCAAGATGGCAGAGAGCCTACTACACACCTAGGCTTATATGTTATAGCCTATTGCCCCTAGGCTACAAACCTGTATAGCATGTTGCTGTTGCTATACGAAACCCTGTAGGTAATTATAACACAAGGGAAGTACAGTTAGCCCTTGAACAACATGAGTTTGAACTGCATGGGTCTACTTATATGCAGATTTTTTTTTTTTTTTTTTTGGAGGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7294:HG2_PB_pbsv_10210:HG2_10X_allpass_1709:HG4_Ill_Krunchall_14387:HG3_Ill_Krunchall_13857:HG4_10X_allpass_1983:HG3_10X_allpass_2062:HG3_PB_pbsv_9952:HG2_PB_PB10Xdip_31322:HG3_PB_HySA_15339:HG4_PB_pbsv_10239:HG4_Ill_MetaSV_5569:HG4_Ill_GATKHCSBGrefine_7073:HG3_Ill_MetaSV_5520:HG2_Ill_GATKHCSBGrefine_6935:HG2_Ill_MetaSV_5338:HG4_PB_SVrefine2Falcon1Dovetail_6274:HG4_Ill_SVrefine2DISCOVARDovetail_7393:HG3_Ill_SVrefine2DISCOVARDovetail_7622:HG2_PB_SVrefine2PBcRplusDovetail_11521:HG2_PB_SVrefine2PB10Xhap12_7454:HG2_PB_SVrefine2Falcon1plusDovetail_12321:HG2_Ill_SVrefine2DISCOVARplusDovetail_13508;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7294:HG4_PB_SVrefine2Falcon1Dovetail_6274:HG4_Ill_SVrefine2DISCOVARDovetail_7393:HG3_Ill_SVrefine2DISCOVARDovetail_7622:HG2_PB_SVrefine2PBcRplusDovetail_11521:HG2_PB_SVrefine2PB10Xhap12_7454:HG2_PB_SVrefine2Falcon1plusDovetail_12321:HG2_Ill_SVrefine2DISCOVARplusDovetail_13508;NumExactMatchSVs=8;ClusterMaxShiftDist=0.122137;ClusterMaxSizeDiff=0.122137;ClusterMaxEditDist=0.122137;PBcalls=9;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1204;DistBack=4997;DistForward=-997;DistMin=-997;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=221;REFWIDENED=9:36362692-36364116;PctSeqSimilarity=0.8936;PctSizeSimilarity=0.995;PctRecOverlap=0.8423;SizeDiff=6;StartDistance=-190;EndDistance=-184;GTMatch=0;TruScore=91;MatchId=4168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:18:./.:7:9:19:6:./.:0:0:0:0:0/0:62:0:0/1:126:38:1270:.:.
chr9	36423654	HG2_PB_SVrefine2PB10Xhap12_7455	TGAAAAGCCCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAAATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGACGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_9953:HG2_10X_allpass_1710:HG4_PB_SVrefine2PBcRDovetail_5110:HG2_PB_assemblyticsPBcR_26924:HG2_PB_assemblyticsfalcon_27668:HG4_Ill_Krunchall_14388:HG3_Ill_Krunchall_13858:HG2_Ill_Krunchall_14148:HG4_Ill_Spiral_839:HG2_Ill_Spiral_724:HG4_Ill_MetaSV_5570:HG3_Ill_MetaSV_5521:HG4_PB_pbsv_10240:HG4_Ill_manta_2487:HG4_Ill_GATKHCSBGrefine_7074:HG3_Ill_manta_2392:HG3_Ill_SVrefine2DISCOVARDovetail_7623:HG3_Ill_GATKHCSBGrefine_6839:HG2_PB_pbsv_10211:HG2_PB_SVrefine2PBcRplusDovetail_11522:HG2_PB_SVrefine2PB10Xhap12_7455:HG2_PB_SVrefine2Falcon1plusDovetail_12322:HG2_Ill_breakscan11_1486:HG2_Ill_SVrefine2DISCOVARplusDovetail_13509:HG2_Ill_GATKHCSBGrefine_6936:HG2_10X_SVrefine210Xhap12_7295:HG3_Ill_Spiral_10831;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7295:HG2_Ill_GATKHCSBGrefine_6936:HG2_Ill_SVrefine2DISCOVARplusDovetail_13509:HG2_Ill_breakscan11_1486:HG2_PB_SVrefine2Falcon1plusDovetail_12322:HG2_PB_SVrefine2PB10Xhap12_7455:HG2_PB_SVrefine2PBcRplusDovetail_11522:HG2_PB_pbsv_10211:HG3_Ill_GATKHCSBGrefine_6839:HG3_Ill_SVrefine2DISCOVARDovetail_7623:HG3_Ill_manta_2392:HG4_Ill_GATKHCSBGrefine_7074:HG4_Ill_manta_2487:HG4_PB_pbsv_10240;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0816944;ClusterMaxSizeDiff=0.0816944;ClusterMaxEditDist=0.116743;PBcalls=9;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=-212;DistForward=-255;DistMin=-255;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=9:36423655-36423980;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:38:0|1:25:2:0:32:./.:0:0:0:0:0/1:25:29:0/1:24:12:.:.:.
chr9	36973082	HG4_Ill_GATKHCSBGrefine_7077	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_27674:HG2_PB_HySA_18472:HG4_PB_assemblyticsfalcon_27095:HG2_PB_pbsv_10215:HG3_PB_pbsv_9958:HG3_PB_HySA_15346:HG3_PB_assemblyticsfalcon_27603:HG3_Ill_svaba_13005:HG3_Ill_Krunchall_13861:HG3_Ill_GATKHC_16501:HG3_Ill_GATKHCSBGrefine_6842:HG3_Ill_250bpfermikitraw_13458:HG4_Ill_manta_2488:HG3_Ill_manta_2394:HG4_Ill_svaba_12928:HG4_Ill_Krunchall_14393:HG4_Ill_GATKHC_16557:HG4_Ill_GATKHCSBGrefine_7077:HG4_Ill_250bpfermikitraw_13726:HG4_Ill_150bpfermikitraw_13148:HG3_Ill_svaba_13004:HG3_Ill_Krunchall_13860:HG3_Ill_GATKHC_16500:HG3_Ill_GATKHCSBGrefine_6841:HG3_Ill_250bpfermikitraw_13457:HG3_10X_allpass_2063:HG2_PB_assemblyticsPBcR_26930:HG2_Ill_svaba_12843:HG2_Ill_Krunchall_14151:HG2_Ill_GATKHC_16541:HG2_Ill_GATKHCSBGrefine_6938:HG2_Ill_250bpfermikitraw_13829:HG2_Ill_150bpfermikitraw_12997;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_12997:HG2_Ill_250bpfermikitraw_13829:HG2_Ill_GATKHCSBGrefine_6938:HG2_Ill_GATKHC_16541:HG2_Ill_Krunchall_14151:HG2_Ill_svaba_12843:HG2_PB_assemblyticsPBcR_26930:HG3_10X_allpass_2063:HG3_Ill_250bpfermikitraw_13457:HG3_Ill_GATKHCSBGrefine_6841:HG3_Ill_GATKHC_16500:HG3_Ill_Krunchall_13860:HG3_Ill_svaba_13004:HG4_Ill_150bpfermikitraw_13148:HG4_Ill_250bpfermikitraw_13726:HG4_Ill_GATKHCSBGrefine_7077:HG4_Ill_GATKHC_16557:HG4_Ill_Krunchall_14393:HG4_Ill_svaba_12928;NumExactMatchSVs=19;ClusterMaxShiftDist=0.178218;ClusterMaxSizeDiff=0.178218;ClusterMaxEditDist=0.178218;PBcalls=8;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=15;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=25;DistForward=79544;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=98;REFWIDENED=9:36973039-36973186;PctSeqSimilarity=0.9903;PctSizeSimilarity=0.9804;PctRecOverlap=0.9808;SizeDiff=-1;StartDistance=0;EndDistance=-1;GTMatch=0;TruScore=98;MatchId=4170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:49:1/1:1:15:1:16:./.:0:0:0:0:1/1:1:32:./.:.:.:.:.:.
chr9	37918371	HG4_Ill_GATKHCSBGrefine_7081	CGTGTGTAGGTGTTCTTGTGTGTGGAAGCAGTGTGGACCACTGAGGGCTGTGTGTGTGTGT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13520:HG4_Ill_scalpel_9520:HG2_PB_HySA_18479:HG3_PB_pbsv_9963:HG3_PB_assemblyticsfalcon_27611:HG2_PB_pbsv_10219:HG3_PB_HySA_15354:HG4_Ill_Krunchall_14401:HG4_Ill_GATKHCSBGrefine_7081:HG4_Ill_250bpfermikitraw_13732:HG3_Ill_scalpel_9918:HG3_Ill_Krunchall_13865:HG3_Ill_GATKHC_16508:HG2_Ill_scalpel_9782:HG2_Ill_manta_2925:HG2_Ill_GATKHC_16549:HG2_Ill_250bpfermikitraw_13838:HG4_PB_pbsv_10248:HG2_PB_SVrefine2Falcon1plusDovetail_12328:HG4_Ill_SVrefine2DISCOVARDovetail_7403:HG2_PB_SVrefine2PBcRplusDovetail_11528:HG2_PB_SVrefine2PB10Xhap12_7462:HG2_PB_SVrefine2Falcon2Bionano_4843;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13838:HG2_Ill_GATKHC_16549:HG2_Ill_manta_2925:HG2_Ill_scalpel_9782:HG3_Ill_GATKHC_16508:HG3_Ill_Krunchall_13865:HG3_Ill_scalpel_9918:HG4_Ill_250bpfermikitraw_13732:HG4_Ill_GATKHCSBGrefine_7081:HG4_Ill_Krunchall_14401;NumExactMatchSVs=10;ClusterMaxShiftDist=0.190476;ClusterMaxSizeDiff=0.190476;ClusterMaxEditDist=0.350877;PBcalls=10;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-60;DistBack=18385;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=134;REFWIDENED=9:37918360-37918553;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:0|1:24:5:3:24:./.:0:0:0:0:0/1:26:17:./.:.:.:.:.:.
chr9	38325046	HG2_PB_SVrefine2PB10Xhap12_7464	CAGCCCCCCGCCCGGCCAGCCGCCCTTCCAGGAGGGTGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7464:HG2_PB_pbsv_10222:HG3_PB_pbsv_9968:HG2_Ill_GATKHCSBGrefine_6946;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7464;NumExactMatchSVs=1;ClusterMaxShiftDist=0.015873;ClusterMaxSizeDiff=0.00790514;ClusterMaxEditDist=0.0714286;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-125;DistBack=39;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=289;REFWIDENED=9:38325047-38325460;PctSeqSimilarity=0.9316;PctSizeSimilarity=0.9921;PctRecOverlap=0.5433;SizeDiff=-1;StartDistance=-57;EndDistance=-58;GTMatch=0;TruScore=82;MatchId=4172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:./.:23:4:1:0:./.:0:0:0:0:0/0:36:0:./.:.:.:.:.:.
chr9	38764819	HG4_Ill_scalpel_9526	ACCCGTCTTTCCACCTCGCTGCTCTTGCCCCTAGCTTCTGCAGCCTCGATTGTACATTGTGTGAATCT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7306:HG3_PB_HySA_15364:HG2_PB_HySA_18485:HG4_Ill_svaba_12938:HG3_Ill_svaba_13015:HG3_Ill_scalpel_9924:HG3_Ill_manta_2396:HG3_Ill_Krunchall_13874:HG3_Ill_GATKHC_16518:HG3_Ill_GATKHCSBGrefine_6850:HG3_Ill_250bpfermikitraw_13470:HG3_Ill_150bpfermikitraw_13062:HG2_Ill_svaba_12854:HG2_Ill_scalpel_9787:HG2_Ill_Krunchall_14166:HG2_Ill_GATKHC_16558:HG2_Ill_GATKHCSBGrefine_6950:HG2_Ill_250bpfermikitraw_13848:HG2_Ill_150bpfermikitraw_13008:HG3_PB_pbsv_9973:HG4_PB_HySA_14921:HG4_PB_assemblyticsfalcon_27113:HG2_PB_pbsv_10226:HG4_PB_pbsv_10255:HG4_Ill_svaba_12937:HG4_Ill_scalpel_9526:HG4_Ill_manta_2491:HG4_Ill_Krunchall_14407:HG4_Ill_GATKHC_16574:HG4_Ill_GATKHCSBGrefine_7086:HG4_Ill_250bpfermikitraw_13738:HG4_Ill_150bpfermikitraw_13158:HG3_Ill_svaba_13014:HG2_Ill_svaba_12853:HG2_Ill_scalpel_9786:HG2_Ill_manta_2928:HG2_Ill_Krunchall_14165:HG2_Ill_GATKHC_16557:HG2_Ill_GATKHCSBGrefine_6949:HG2_Ill_250bpfermikitraw_13847:HG2_Ill_150bpfermikitraw_13007:HG4_Ill_Spiral_841:HG2_Ill_Spiral_726:HG3_Ill_SVrefine2DISCOVARDovetail_7640:HG2_PB_SVrefine2PBcRplusDovetail_11533:HG2_PB_SVrefine2PB10Xhap12_7468:HG2_Ill_SVrefine2DISCOVARplusDovetail_13527;NumClusterSVs=47;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13007:HG2_Ill_250bpfermikitraw_13847:HG2_Ill_GATKHCSBGrefine_6949:HG2_Ill_GATKHC_16557:HG2_Ill_Krunchall_14165:HG2_Ill_manta_2928:HG2_Ill_scalpel_9786:HG2_Ill_svaba_12853:HG3_Ill_svaba_13014:HG4_Ill_150bpfermikitraw_13158:HG4_Ill_250bpfermikitraw_13738:HG4_Ill_GATKHCSBGrefine_7086:HG4_Ill_GATKHC_16574:HG4_Ill_Krunchall_14407:HG4_Ill_manta_2491:HG4_Ill_scalpel_9526:HG4_Ill_svaba_12937;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0437956;ClusterMaxSizeDiff=0.0437956;ClusterMaxEditDist=0.0869565;PBcalls=9;Illcalls=37;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=22;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=1;SVLEN=-67;DistBack=14080;DistForward=2846;DistMin=2846;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=68;REFWIDENED=9:38764811-38764945;PctSeqSimilarity=0.9926;PctSizeSimilarity=1;PctRecOverlap=0.75;SizeDiff=0;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=91;MatchId=4173.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:49:1/1:5:16:3:17:./.:0:0:0:0:1/1:0:44:./.:.:.:.:.:.
chr9	71665323	HG2_PB_SVrefine2Falcon1plusDovetail_12357	TAAGAGTGGAGCTGATGATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_727:HG4_PB_pbsv_10287:HG3_Ill_Krunchall_13915:HG3_PB_assemblyticsfalcon_27627:HG2_PB_assemblyticsfalcon_27695:HG2_PB_assemblyticsPBcR_26956:HG3_PB_HySA_15551:HG2_PB_HySA_18628:HG3_PB_pbsv_10005:HG2_Ill_Krunchall_14200:HG4_PB_assemblyticsfalcon_27124:HG2_PB_pbsv_10252:HG4_Ill_MetaSV_5584:HG3_Ill_MetaSV_5535:HG2_Ill_MetaSV_5355:HG4_PB_SVrefine2Falcon1Dovetail_6294:HG4_PB_HySA_15071:HG4_Ill_scalpel_9556:HG4_Ill_manta_2495:HG4_Ill_SVrefine2DISCOVARDovetail_7416:HG4_Ill_GATKHCSBGrefine_7122:HG4_10X_allpass_1993:HG3_PB_SVrefine2PBcRDovetail_4737:HG3_PB_SVrefine2Falcon1Dovetail_6198:HG3_Ill_scalpel_9956:HG3_Ill_manta_2400:HG3_Ill_SVrefine2DISCOVARDovetail_7647:HG3_Ill_GATKHCSBGrefine_6891:HG3_10X_allpass_2077:HG2_PB_SVrefine2PBcRplusDovetail_11560:HG2_PB_SVrefine2PB10Xhap12_7502:HG2_PB_SVrefine2Falcon2Bionano_4845:HG2_PB_SVrefine2Falcon1plusDovetail_12357:HG2_Ill_scalpel_9825:HG2_Ill_manta_2934:HG2_Ill_SVrefine2DISCOVARplusDovetail_13542:HG2_Ill_GATKHCSBGrefine_6990:HG2_10X_allpass_1717:HG2_10X_SVrefine210Xhap12_7314:HG2_Ill_breakscan11_1491:HG4_Ill_Spiral_847;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7314:HG2_10X_allpass_1717:HG2_Ill_GATKHCSBGrefine_6990:HG2_Ill_SVrefine2DISCOVARplusDovetail_13542:HG2_Ill_manta_2934:HG2_Ill_scalpel_9825:HG2_PB_SVrefine2Falcon1plusDovetail_12357:HG2_PB_SVrefine2Falcon2Bionano_4845:HG2_PB_SVrefine2PB10Xhap12_7502:HG2_PB_SVrefine2PBcRplusDovetail_11560:HG3_10X_allpass_2077:HG3_Ill_GATKHCSBGrefine_6891:HG3_Ill_SVrefine2DISCOVARDovetail_7647:HG3_Ill_manta_2400:HG3_Ill_scalpel_9956:HG3_PB_SVrefine2Falcon1Dovetail_6198:HG3_PB_SVrefine2PBcRDovetail_4737:HG4_10X_allpass_1993:HG4_Ill_GATKHCSBGrefine_7122:HG4_Ill_SVrefine2DISCOVARDovetail_7416:HG4_Ill_manta_2495:HG4_Ill_scalpel_9556:HG4_PB_HySA_15071:HG4_PB_SVrefine2Falcon1Dovetail_6294;NumExactMatchSVs=24;ClusterMaxShiftDist=0.136264;ClusterMaxSizeDiff=0.136264;ClusterMaxEditDist=0.136264;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-234;DistBack=13095;DistForward=-220;DistMin=-220;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9740;REFWIDENED=9:71655595-71675297;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:36:1/1:0:16:2:11:./.:0:0:0:0:1/1:0:33:./.:.:.:.:.:.
chr9	71738120	HG4_Ill_SVrefine2DISCOVARDovetail_7418	GACACTCTACAGCCGCATGGGTTAGAGCACCTGCACCCCAGGGTGACAGGATATGTGATTAACATACTGGCCGGTGATGTTTTTGATTCTGTGGTAAAATATACATAAAGTAAAATGTAGTATTTTAGCCGTTTAAAAATGGACCCTTAATTCAATATTGTGCCACCATCACCACTACCCATTTCCAGAACTTTTTCATCATCCCAAACAGAAAGCCATTAGAATACCTTATTTTCTCCTTTCCCCAGCCTCTGGGCTTCTGGATACTTTTAATTATTATTATATTTTTTGGAGGGAACAGAAGATGTTGACTAAGAATGTACAGTAAATGTCTCAAAAAATAAGAGAATGTATAGTAAATGTGTAGTAGAATCACGCTGGCAGAATATGAACAAACATTTGGGAATTCCTGGGTAGACAAAAGCACTATAGCTCAAGGTTCTTAGAGTGCACGTACTTTCTTTAATAGAGACAACTATAAACCTTCAAGCGTTTCCTATTTTGACTGAAATGGAATGGAGTTACCCAGTGCTCAACCTGCTCTAATTAACTAGGCATAGATGCTTGATGATCTGTAACTCTGTGATTCTTTTAACTGGCCTCATTTTAGGTGTCCTGTTGATACTGGGTTTAGTTTGTTTTTGTTTTTTAATTATTTTATTTTATTTTATTTATTTATTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCCATCTCGGCTCACTGCAAGCTCCACCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTATAGGCACCCGCCACCACGCCCGGCTAATTTTTTTGAATTTTTTTTCTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCGCCCACCTCGGCCTTCCAAAGTGCTGGGATTACAGGCCTGAGCCACGGCGCCCAGCCTTATTTTATTTTTTGAGACAGAGTCTTGCTGTGTTTCCAGGCTGGAGTGCAGTGGTGTAATCTTGGTTCACTGCAGCTTCAACCTCTCAGGCTCAAGTGATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCAAACTACCATGCCTGGCTAATTTTGTTTATTTTTGTAGAGGCTAGTTTAAATTATTATTATTATTTTTTTCTGTAGATTGGGTTCTTGCTTTGCTGCCCAGGCTAGTCTTGAACTCCTGGCTTTAAGCCATCCTCCCGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGTGTGAGCCCCCGCTATTTTTTCTTGACCCTTGCCTCTTCTTGTGTTACGACTTTCATCACAATGAGGTTATCAACTTGTAGTAAGAATTTACAGCTTCCTTTGATTGAAAAGTCCCTTTGAAATGGTGAATGAAGATAATTCAAACGGCAAGATTTGGCAGAACATTCTCTCTTAAGAAGACTCCTGCATTCACAGACTTTCAGAATGTTATTACTTCCTTTTAATTCTAGTAAGGCAAGAGAGAAAAGGTTTACCCTCCTATAGTATGTTCTCTTCTGAACAATATAGTTCAGAGTTTTATTTGGTAAATGGATGCATTTTGCAATCTACATGAGAAAACATTTCTTAGAAAATGTCCAGTGAATGGTTTTATCAGTGATTTCAGTGATGTTTGGGGAATCACCTGGTAGCTTAATAAAAATGGAAACTCTCCAAATATTCCAGATTTATTAAGTCAAACTCTTTTTTTGTTGTTGTTGAGATGGAGTTTCGCTCTTGTCACCCAGGCTGGAGTGCAACGGCGCGATCTTGGCTTACTGCAACCTCTGCTTCCCAGGTTCAAGCGATTTTCGTGCCTCAGCCTCCCAAGTAGCTGGGTTTACAGGCATGTGCCACCACGCTTAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCACCTCGACCTCCAAAAGTGCTAGGATTACAGGTGTGAGCCACTGCGCCCGGCCAAGTCAAAGTCTTTATACTACAATCTGTGCGTTTAATAGCACCCTGAGTGATTTTTTTTTTTTTTTTTTTTTGAGATAGAGTCTAACTCTGTTATCCGGGTTGGAGTGCACTGGTGCCATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCGTGCCTGAGCCTCCCAAGCAGCTGGGACTACAGGCATGCACCACAATGCCCAGCTAATTTTTAGTAGAGACGGGATTTGTCCATGTTGGCCAGGCTGGTCTTGAACTCCTGGCCTCAAGTGATCTGCCCACCTCGGCTTCCACCTTCCAAAGTGCTGAGATTACGGGCATGAGCCATTGCACCTGGCTCACCTTGATTCTGATATGTAATTAGGTTTGGGGGTCACTAGAATAAACACATGCACACACACACACTCGAATGTGAGTGCAAACCAAGATATAAAATTAATCTGAAGTTACAAGATAACACAATTTTATATACAACATGAAATAAAATTAACAATAGTTTCTTCCTTATAATTAGGTAGACAGTTCAAGTTTGGCAAATCTAATTGGCACCTTTTGATATTGATCATCACTGAACTTTAGAATCCCCAGTGTCCAGAACTACTGGTCTCCATAGGAGATATCAAGGTACTGGACTAGTATTTGATTTAGCATTAATGAACACTAGTTGTGTACCCATTGTGAAACAGGGATTTTCAGATATACTGTCGTTAAATCTTTACAACAACCTTGAGCATGGTATTTCTTTTTTTCTCATTTTACGGAAGAGAAAATTGAGGCCACTTTGGGTCTTCTTGCTTGAAACCATGGTTCTTTTCCTGGTCCTCCCATTGTAGAATAAGAAATTCCTACCTACTCACTCCCCTTCACCTCCAGCAGTTATATTGAGATGTAATTCATGACAAGCTATGTACAGTATTCATAAATTCTTCATGCAAATCTTTTGGAACATCAGGTACTGTGCTAGGCCCTGAGGCAAATAAAAAGATGAGCCAAAATGGAAATAAATTTCAAAAGAGCAAAGGACTCAAGAGCCAAGGGTTCTTTTCATGGTACCCTGAGACCTCTGATGAGTTAGATTATACTTGAATGGGGTCTTAGGTTGGCTGGGCCAGCTCCCCAGAAAATCAAGTCGTGGGCATTTGCTTATTGAGATGGGTCAGAAGTACTCTGCATGACAGTACCTACCTGGCACCCTGAAATGCCACACAGTGTAAAAGAAAGGACCCAGGCTTTAGGTGTGGAAGAACTGACCTCTGCTACAACCAGCTGAATGAACCACAGTAAATCTCATAAGCTCGAAGCTGCCACATGCTGGTATATAAAATAAAGGAAATAATTATCTTGCTCCTGAATTATAGTGAAGACTCAAAAAGACCTTATTTGTACAAGGGCTTGTAAAATGTAAAATGATAACAAAGGCTACGCACCTCCATTTGGGAGAAATTTATAATGCAAAGGAAACAGAAAAAGCCATAAATTTACCTAGCACTTTTCAGTGTACTTTTTAGTTAACTGAGGCTGTTGATAATTCTCTTTTAGCTTTGGCCATTTTTGTTTTAAACAGTTACATTGAGATATAATTCACATACTATACAATTCACTTATTTAGTCTACAATTCAATGTCTTTTAGGATATTTGTGGAGTTGTTAACCATCACCACTGTCAATATTAAGATATTTTCAAGGCTAGATGTGGTAGCTCATGCCTGTAATCCCAGCAGTTTGGAAGGCTGAGGTGGAAGGATTGCTTGAGCCTGGGAGTTCAAGTCCAGCCTGGGCAACATAGGGAGACCCCTGTCTCTCTCTCTCTTTTTTTTTTTTTGAGGCAAAGTCTCACTCTATCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAAACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCAGCCTCCCAAAGTGTTGGAATTACAGGCGTCAGCCACCGCGCCCGGCCGCAAGGGAGACCCCTGTCTCTACAAAAACTTTAAAAATTAGCTGGGCATGGTAGTTTATGCCTATAGTCCCAGCTACTCAGGAGGCTGAGTTGGGGGATCACTTGAGCCCAAGAGATCGGGGCTTCGCCAAGCTATGATCATGCCACTGGGCTCTAGCCTGTGCGACACAGTAAGATCTTGTCTCAAAAAAAAAAAAAAGATGTTTTTAATGCCCCCTCAGAGAACATTTTCCCCAGTAAACCCCCTCTACCCCTTAGCTGGCTCCTGTCAATATTCCCCCTCTACCCCTGACCAGGGTACCAGGAATCTACTTTCTGTCCCTATAGATTAGCCTATTCTGAACATTTTATATAAATGGAATCATAGACTATGTGGCCCTTCATTGTCTGGCTTCTTTGACTTAGCATGTTTGCAAGGTTTATCTATGGGAGCCGTGGTTTACTCCAGTAATCCCACTCCTTTGGGGGACCGAGGTGGGAGGATCACCTGAGTCCTGGGCAACATGGTGACTAAAGGCTTATGTACATTGTAGTATGTATCTGTTCCTTTTTTTTTTTTGAGTCAGGATCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCACAATCATGGTTCACTGCTGCAGCCTTGAACTTCTGGTCTCAAGCAGTCCTCCTGTCTCGGCCTCCCAAAGTGCTAAGATTATAGGTGTGAGCCATCATGACAGGCCAGTACTTTATTCTTTCTATTGCTGAATAATCATCCATTGCATGGACATGTCATAGTTTGCTTATCCATTCATCCATTATGGGCATCTGGATTGTTTCTGCTTTCTGGCTATTATGAATAATGTTGTTATGAACACTCATGTACAAGTTTTTATGTGGACATACATTTTCATTTGCTAGAGTACATACCTAGAAGTGGAAAATATATGGTAACTCCATATTTAATATTTTCAGGATTTGCCATACTGTTTTTTAGAGTGGCCATATTCTTCTACAGTCCCATCAGCCAGGTATTTGGAGTTCCAATTTCATGTCTGCATCCACATACATTATTACTGTTGTCTGTCTTTTTAAATTTTAACC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7316:HG4_10X_allpass_1994:HG4_Ill_Krunchall_14442:HG3_PB_assemblyticsfalcon_27630:HG2_Ill_tnscope_1172:HG4_PB_pbsv_10289:HG4_PB_SVrefine2PBcRDovetail_5140:HG4_Ill_SVrefine2DISCOVARDovetail_7418:HG4_Ill_MetaSV_5586:HG4_Ill_GATKHCSBGrefine_7124:HG3_PB_pbsv_10007:HG3_PB_SVrefine2PBcRDovetail_4739:HG3_PB_SVrefine2Falcon1Dovetail_6200:HG3_Ill_SVrefine2DISCOVARDovetail_7649:HG3_Ill_MetaSV_5537:HG2_PB_pbsv_10254:HG2_PB_SVrefine2PB10Xhap12_7504:HG2_PB_SVrefine2Falcon1plusDovetail_12359:HG2_Ill_breakscan11_1492:HG2_Ill_MetaSV_5357;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7316:HG4_PB_pbsv_10289:HG4_PB_SVrefine2PBcRDovetail_5140:HG4_Ill_SVrefine2DISCOVARDovetail_7418:HG4_Ill_MetaSV_5586:HG4_Ill_GATKHCSBGrefine_7124:HG3_PB_pbsv_10007:HG3_PB_SVrefine2PBcRDovetail_4739:HG3_PB_SVrefine2Falcon1Dovetail_6200:HG3_Ill_SVrefine2DISCOVARDovetail_7649:HG3_Ill_MetaSV_5537:HG2_PB_pbsv_10254:HG2_PB_SVrefine2PB10Xhap12_7504:HG2_PB_SVrefine2Falcon1plusDovetail_12359:HG2_Ill_breakscan11_1492:HG2_Ill_MetaSV_5357;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0066654;ClusterMaxSizeDiff=0.0066654;ClusterMaxEditDist=0.0066654;PBcalls=9;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-5234;DistBack=5338;DistForward=-5234;DistMin=-5234;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=9:71738121-71743356;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4175.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:30:0|1:45:1:0:15:./.:0:0:0:0:0/1:47:18:0/1:385:167:5168:.:.
chr9	71777926	HG2_PB_SVrefine2PB10Xhap12_7505	AAGTATCTTTATTTTATTTTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCCTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5358:HG4_PB_pbsv_10290:HG4_Ill_Krunchall_14443:HG3_Ill_Krunchall_13917:HG2_Ill_Krunchall_14203:HG2_PB_HySA_18631:HG2_PB_assemblyticsfalcon_27698:HG3_PB_SVrefine2PBcRDovetail_4740:HG2_PB_assemblyticsPBcR_26959:HG2_PB_pbsv_10255:HG3_PB_pbsv_10008:HG4_PB_assemblyticsfalcon_27127:HG4_PB_SVrefine2PBcRDovetail_5141:HG4_Ill_scalpel_9559:HG4_Ill_manta_2496:HG4_Ill_SVrefine2DISCOVARDovetail_7419:HG4_Ill_GATKHCSBGrefine_7125:HG4_10X_allpass_1995:HG3_Ill_scalpel_9958:HG3_Ill_manta_2402:HG3_Ill_SVrefine2DISCOVARDovetail_7650:HG3_Ill_GATKHCSBGrefine_6893:HG3_10X_allpass_2079:HG2_PB_SVrefine2PBcRplusDovetail_11562:HG2_PB_SVrefine2PB10Xhap12_7505:HG2_PB_SVrefine2Falcon2Bionano_4847:HG2_PB_SVrefine2Falcon1plusDovetail_12360:HG2_Ill_scalpel_9828:HG2_Ill_manta_2935:HG2_Ill_SVrefine2DISCOVARplusDovetail_13544:HG2_Ill_GATKHCSBGrefine_6992:HG2_10X_allpass_1719:HG2_10X_SVrefine210Xhap12_7317:HG4_PB_HySA_15073:HG4_Ill_MetaSV_5587:HG3_Ill_MetaSV_5538:HG2_Ill_tnscope_1173;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7317:HG2_10X_allpass_1719:HG2_Ill_GATKHCSBGrefine_6992:HG2_Ill_SVrefine2DISCOVARplusDovetail_13544:HG2_Ill_manta_2935:HG2_Ill_scalpel_9828:HG2_PB_SVrefine2Falcon1plusDovetail_12360:HG2_PB_SVrefine2Falcon2Bionano_4847:HG2_PB_SVrefine2PB10Xhap12_7505:HG2_PB_SVrefine2PBcRplusDovetail_11562:HG3_10X_allpass_2079:HG3_Ill_GATKHCSBGrefine_6893:HG3_Ill_SVrefine2DISCOVARDovetail_7650:HG3_Ill_manta_2402:HG3_Ill_scalpel_9958:HG4_10X_allpass_1995:HG4_Ill_GATKHCSBGrefine_7125:HG4_Ill_SVrefine2DISCOVARDovetail_7419:HG4_Ill_manta_2496:HG4_Ill_scalpel_9559:HG4_PB_SVrefine2PBcRDovetail_5141:HG4_PB_assemblyticsfalcon_27127;NumExactMatchSVs=22;ClusterMaxShiftDist=0.212072;ClusterMaxSizeDiff=0.212072;ClusterMaxEditDist=0.212072;PBcalls=14;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=25699;DistForward=3083;DistMin=3083;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=9:71777927-71778259;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:36:1/1:1:5:0:14:./.:0:0:0:0:1/1:0:42:0/1:2:12:.:.:.
chr9	74269385	HG2_PB_SVrefine2PBcRplusDovetail_11569	TAAGAGATCATTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCAGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7325:HG2_PB_HySA_18659:HG3_PB_pbsv_10019:HG2_PB_assemblyticsPBcR_26975:HG4_PB_SVrefine2Falcon1Dovetail_6306:HG3_PB_SVrefine2Falcon1Dovetail_6209:HG3_Ill_MetaSV_5543:HG2_Ill_tnscope_1174:HG4_PB_pbsv_10302:HG4_PB_assemblyticsfalcon_27146:HG4_Ill_manta_2501:HG4_Ill_MetaSV_5592:HG4_Ill_GATKHCSBGrefine_7136:HG4_10X_allpass_1997:HG3_PB_assemblyticsfalcon_27647:HG3_PB_SVrefine2PBcRDovetail_4750:HG3_Ill_manta_2408:HG3_Ill_GATKHCSBGrefine_6905:HG3_10X_allpass_2082:HG2_PB_pbsv_10268:HG2_PB_assemblyticsfalcon_27715:HG2_PB_SVrefine2PBcRplusDovetail_11569:HG2_PB_SVrefine2PB10Xhap12_7515:HG2_PB_SVrefine2Falcon2Bionano_4855:HG2_PB_SVrefine2Falcon1plusDovetail_12368:HG2_Ill_manta_2939:HG2_Ill_breakscan11_1493:HG2_Ill_SpiralSDKrefine_17860:HG2_Ill_SVrefine2DISCOVARplusDovetail_13555:HG2_Ill_MetaSV_5362:HG2_Ill_GATKHCSBGrefine_7000;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7325:HG4_PB_pbsv_10302:HG4_PB_assemblyticsfalcon_27146:HG4_Ill_manta_2501:HG4_Ill_MetaSV_5592:HG4_Ill_GATKHCSBGrefine_7136:HG4_10X_allpass_1997:HG3_PB_assemblyticsfalcon_27647:HG3_PB_SVrefine2PBcRDovetail_4750:HG3_Ill_manta_2408:HG3_Ill_GATKHCSBGrefine_6905:HG3_10X_allpass_2082:HG2_PB_pbsv_10268:HG2_PB_assemblyticsfalcon_27715:HG2_PB_SVrefine2PBcRplusDovetail_11569:HG2_PB_SVrefine2PB10Xhap12_7515:HG2_PB_SVrefine2Falcon2Bionano_4855:HG2_PB_SVrefine2Falcon1plusDovetail_12368:HG2_Ill_manta_2939:HG2_Ill_breakscan11_1493:HG2_Ill_SpiralSDKrefine_17860:HG2_Ill_SVrefine2DISCOVARplusDovetail_13555:HG2_Ill_MetaSV_5362:HG2_Ill_GATKHCSBGrefine_7000;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0756757;ClusterMaxSizeDiff=0.0756757;ClusterMaxEditDist=0.0759494;PBcalls=15;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-281;DistBack=-128;DistForward=-270;DistMin=-270;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=9:74269386-74269677;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:21:0|1:24:0:2:28:./.:0:0:0:0:0/1:25:16:./.:.:.:.:.:.
chr9	74354256	HG3_Ill_SVrefine2DISCOVARDovetail_7661	TGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGACTACTTTTTTTTTAGTGGTACTGGA	T	20	PASS	ClusterIDs=HG3_PB_HySA_15575:HG3_PB_pbsv_10020:HG2_PB_pbsv_10269:HG4_PB_assemblyticsfalcon_27147:HG3_PB_assemblyticsfalcon_27648:HG2_PB_HySA_18661:HG2_PB_assemblyticsPBcR_26976:HG2_PB_assemblyticsfalcon_27716:HG3_PB_SVrefine2PBcRDovetail_4751:HG3_Ill_svaba_13055:HG3_Ill_scalpel_9971:HG3_Ill_manta_2409:HG3_Ill_SVrefine2DISCOVARDovetail_7661:HG3_Ill_Krunchall_13943:HG3_Ill_GATKHC_16620:HG3_Ill_GATKHCSBGrefine_6906:HG3_Ill_250bpfermikitraw_13524:HG3_Ill_150bpfermikitraw_13107:HG3_10X_allpass_2083:HG2_PB_SVrefine2PBcRplusDovetail_11570:HG2_PB_SVrefine2PB10Xhap12_7516:HG2_PB_SVrefine2Falcon2Bionano_4856:HG2_PB_SVrefine2Falcon1plusDovetail_12369:HG2_Ill_svaba_12895:HG2_Ill_scalpel_9841:HG2_Ill_SpiralSDKrefine_17861:HG2_Ill_SVrefine2DISCOVARplusDovetail_13556:HG2_Ill_Krunchall_14228:HG2_Ill_GATKHC_16677:HG2_Ill_GATKHCSBGrefine_7001:HG2_Ill_250bpfermikitraw_13911:HG2_Ill_150bpfermikitraw_13066:HG2_10X_allpass_1720:HG2_10X_SVrefine210Xhap12_7326;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7326:HG2_10X_allpass_1720:HG2_Ill_150bpfermikitraw_13066:HG2_Ill_250bpfermikitraw_13911:HG2_Ill_GATKHCSBGrefine_7001:HG2_Ill_GATKHC_16677:HG2_Ill_Krunchall_14228:HG2_Ill_SVrefine2DISCOVARplusDovetail_13556:HG2_Ill_SpiralSDKrefine_17861:HG2_Ill_scalpel_9841:HG2_Ill_svaba_12895:HG2_PB_SVrefine2Falcon1plusDovetail_12369:HG2_PB_SVrefine2Falcon2Bionano_4856:HG2_PB_SVrefine2PB10Xhap12_7516:HG2_PB_SVrefine2PBcRplusDovetail_11570:HG3_10X_allpass_2083:HG3_Ill_150bpfermikitraw_13107:HG3_Ill_250bpfermikitraw_13524:HG3_Ill_GATKHCSBGrefine_6906:HG3_Ill_GATKHC_16620:HG3_Ill_Krunchall_13943:HG3_Ill_SVrefine2DISCOVARDovetail_7661:HG3_Ill_manta_2409:HG3_Ill_scalpel_9971:HG3_Ill_svaba_13055:HG3_PB_SVrefine2PBcRDovetail_4751;NumExactMatchSVs=26;ClusterMaxShiftDist=0.1125;ClusterMaxSizeDiff=0.1125;ClusterMaxEditDist=0.1125;PBcalls=13;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=18;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-81;DistBack=11021;DistForward=13035;DistMin=11021;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=9:74354257-74354342;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:22:1|0:3:21:12:0:./.:0:0:0:0:0/1:17:26:./.:.:.:.:.:.
chr9	75669517	HG4_PB_SVrefine2Falcon1Dovetail_6312	TAAGACTTGATATTGGAGATCGAGACCATGCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_848:HG3_PB_assemblyticsfalcon_27660:HG2_PB_assemblyticsPBcR_26986:HG4_PB_assemblyticsfalcon_27158:HG2_PB_assemblyticsfalcon_27730:HG4_PB_pbsv_10312:HG4_Ill_Krunchall_14482:HG3_Ill_Krunchall_13954:HG2_PB_pbsv_10278:HG3_Ill_Spiral_10896:HG2_PB_HySA_18677:HG2_Ill_Spiral_728:HG3_PB_pbsv_10030:HG4_Ill_MetaSV_5597:HG3_Ill_MetaSV_5548:HG4_PB_SVrefine2PBcRDovetail_5158:HG4_PB_SVrefine2Falcon1Dovetail_6312:HG4_Ill_svaba_12988:HG4_Ill_scalpel_9580:HG4_Ill_manta_2503:HG4_Ill_SVrefine2DISCOVARDovetail_7433:HG4_Ill_GATKHCSBGrefine_7140:HG4_10X_allpass_2000:HG3_PB_SVrefine2PBcRDovetail_4757:HG3_PB_SVrefine2Falcon1Dovetail_6214:HG3_Ill_svaba_13064:HG3_Ill_scalpel_9978:HG3_Ill_manta_2411:HG3_Ill_SVrefine2DISCOVARDovetail_7667:HG3_Ill_GATKHCSBGrefine_6912:HG3_10X_allpass_2084:HG2_PB_SVrefine2PBcRplusDovetail_11576:HG2_PB_SVrefine2PB10Xhap12_7521:HG2_PB_SVrefine2Falcon2Bionano_4861:HG2_PB_SVrefine2Falcon1plusDovetail_12376:HG2_Ill_svaba_12902:HG2_Ill_scalpel_9846:HG2_Ill_manta_2941:HG2_Ill_breakscan11_1494:HG2_Ill_SVrefine2DISCOVARplusDovetail_13563:HG2_Ill_MetaSV_5366:HG2_Ill_GATKHCSBGrefine_7006:HG2_10X_allpass_1721:HG2_10X_SVrefine210Xhap12_7331;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7331:HG2_10X_allpass_1721:HG2_Ill_GATKHCSBGrefine_7006:HG2_Ill_MetaSV_5366:HG2_Ill_SVrefine2DISCOVARplusDovetail_13563:HG2_Ill_breakscan11_1494:HG2_Ill_manta_2941:HG2_Ill_scalpel_9846:HG2_Ill_svaba_12902:HG2_PB_SVrefine2Falcon1plusDovetail_12376:HG2_PB_SVrefine2Falcon2Bionano_4861:HG2_PB_SVrefine2PB10Xhap12_7521:HG2_PB_SVrefine2PBcRplusDovetail_11576:HG3_10X_allpass_2084:HG3_Ill_GATKHCSBGrefine_6912:HG3_Ill_SVrefine2DISCOVARDovetail_7667:HG3_Ill_manta_2411:HG3_Ill_scalpel_9978:HG3_Ill_svaba_13064:HG3_PB_SVrefine2Falcon1Dovetail_6214:HG3_PB_SVrefine2PBcRDovetail_4757:HG4_10X_allpass_2000:HG4_Ill_GATKHCSBGrefine_7140:HG4_Ill_SVrefine2DISCOVARDovetail_7433:HG4_Ill_manta_2503:HG4_Ill_scalpel_9580:HG4_Ill_svaba_12988:HG4_PB_SVrefine2Falcon1Dovetail_6312:HG4_PB_SVrefine2PBcRDovetail_5158;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0912409;ClusterMaxSizeDiff=0.0912409;ClusterMaxEditDist=0.0912409;PBcalls=16;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-279;DistBack=13946;DistForward=60679;DistMin=13946;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=9:75669518-75669809;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4179.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:1/1:1:16:0:12:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr9	75935993	HG2_Ill_Krunchall_14238	TGTTCAACTCCCACCCATGAGTGAGAACATACGGTGTTTGTTTTTCTGTCCTTGCGATAGTTTGCTCCTA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_10315:HG4_Ill_Krunchall_14486:HG4_Ill_svaba_12992:HG4_Ill_GATKHC_16707:HG4_Ill_GATKHCSBGrefine_7144:HG4_CG_vcfBeta_6604:HG2_PB_pbsv_10281:HG2_Ill_svaba_12906:HG2_Ill_SpiralSDKrefine_17864:HG2_Ill_Krunchall_14238:HG2_Ill_GATKHC_16692:HG2_Ill_GATKHCSBGrefine_7010:HG2_CG_vcfBeta_5866:HG2_10X_allpass_1722:HG4_Ill_Spiral_849;NumClusterSVs=15;ExactMatchIDs=HG2_10X_allpass_1722:HG2_CG_vcfBeta_5866:HG2_Ill_GATKHCSBGrefine_7010:HG2_Ill_GATKHC_16692:HG2_Ill_Krunchall_14238:HG2_Ill_SpiralSDKrefine_17864:HG2_Ill_svaba_12906:HG2_PB_pbsv_10281:HG4_CG_vcfBeta_6604:HG4_Ill_GATKHCSBGrefine_7144:HG4_Ill_GATKHC_16707:HG4_Ill_svaba_12992;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0285714;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.057971;PBcalls=2;Illcalls=10;TenXcalls=1;CGcalls=2;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=2;HG2count=8;HG3count=0;HG4count=7;NumTechs=4;NumTechsExact=4;SVLEN=-69;DistBack=58303;DistForward=27020;DistMin=27020;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=9:75935994-75936066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:33:0|1:41:8:2:24:./.:0:0:0:0:0/1:21:7:./.:.:.:.:.:.
chr9	77082581	HG3_Ill_Krunchall_13966	TTATATATACTAGTTATATATATAACTAGTATATATATATATATACTAGTTATATATATAACTAGTATATA	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13082:HG2_PB_PB10Xdip_31650:HG2_Ill_Krunchall_14249:HG2_PB_pbsv_10288:HG3_PB_pbsv_10040:HG3_Ill_manta_2414:HG3_Ill_Krunchall_13966:HG3_Ill_GATKHC_16644:HG3_Ill_GATKHCSBGrefine_6919:HG3_Ill_250bpfermikitraw_13548:HG3_Ill_150bpfermikitraw_13124:HG2_Ill_manta_2943:HG2_Ill_Krunchall_14248:HG2_Ill_GATKHC_16706:HG2_Ill_250bpfermikitraw_13928;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13082:HG3_Ill_manta_2414:HG3_Ill_Krunchall_13966:HG3_Ill_GATKHC_16644:HG3_Ill_GATKHCSBGrefine_6919:HG3_Ill_250bpfermikitraw_13548:HG3_Ill_150bpfermikitraw_13124:HG2_Ill_manta_2943:HG2_Ill_Krunchall_14248:HG2_Ill_GATKHC_16706:HG2_Ill_250bpfermikitraw_13928;NumExactMatchSVs=11;ClusterMaxShiftDist=0.167939;ClusterMaxSizeDiff=0.167939;ClusterMaxEditDist=0.184615;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-70;DistBack=5486;DistForward=65047;DistMin=5486;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=40;REFWIDENED=9:77082582-77082691;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4181.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:35:./.:10:17:8:7:./.:0:0:0:0:0/1:22:22:./.:.:.:.:.:.
chr9	77173554	HG2_Ill_manta_2944	AAATATCACAGCAATGCAATGTAAGAAGAATAAGGACAAAGTGCTGAGAAGAGATAGAGGGAGAAAC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_729:HG3_PB_pbsv_10041:HG2_PB_pbsv_10289:HG4_PB_SVrefine2Falcon1Dovetail_6318:HG3_PB_SVrefine2PBcRDovetail_4763:HG3_PB_SVrefine2Falcon1Dovetail_6220:HG3_Ill_svaba_13078:HG3_Ill_manta_2415:HG3_Ill_SVrefine2DISCOVARDovetail_7676:HG3_Ill_Krunchall_13968:HG3_Ill_GATKHCSBGrefine_6920:HG3_Ill_250bpfermikitraw_13550:HG3_Ill_150bpfermikitraw_13126:HG2_PB_SVrefine2PB10Xhap12_7528:HG2_PB_SVrefine2Falcon1plusDovetail_12382:HG2_Ill_svaba_12918:HG2_Ill_scalpel_9857:HG2_Ill_manta_2944:HG2_Ill_SpiralSDKrefine_17871:HG2_Ill_SVrefine2DISCOVARplusDovetail_13574:HG2_Ill_Krunchall_14252:HG2_Ill_GATKHCSBGrefine_7016:HG2_Ill_250bpfermikitraw_13930:HG2_10X_SVrefine210Xhap12_7340:HG2_PB_HySA_18696;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7340:HG2_Ill_250bpfermikitraw_13930:HG2_Ill_GATKHCSBGrefine_7016:HG2_Ill_Krunchall_14252:HG2_Ill_SVrefine2DISCOVARplusDovetail_13574:HG2_Ill_SpiralSDKrefine_17871:HG2_Ill_manta_2944:HG2_Ill_scalpel_9857:HG2_Ill_svaba_12918:HG2_PB_SVrefine2Falcon1plusDovetail_12382:HG2_PB_SVrefine2PB10Xhap12_7528:HG3_Ill_150bpfermikitraw_13126:HG3_Ill_250bpfermikitraw_13550:HG3_Ill_GATKHCSBGrefine_6920:HG3_Ill_Krunchall_13968:HG3_Ill_SVrefine2DISCOVARDovetail_7676:HG3_Ill_manta_2415:HG3_Ill_svaba_13078:HG3_PB_SVrefine2Falcon1Dovetail_6220:HG3_PB_SVrefine2PBcRDovetail_4763:HG4_PB_SVrefine2Falcon1Dovetail_6318;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0451128;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.0458015;PBcalls=8;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-66;DistBack=2;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=69;REFWIDENED=9:77173555-77173689;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:./.:19:8:6:28:./.:0:0:0:0:0/1:16:21:./.:.:.:.:.:.
chr9	77319255	HG2_PB_SVrefine2PB10Xhap12_7530	TATATATATATATGGCATATATATACACATATATATATATGGCATATATATACACATATATATATATGGCATATATATACACATATATATATATGGCATATATATACACATATATATATATGGCATATATATACACATATATATATATGGCATATATATACACATATATATATATGGCATATATATACACATATATATATATGGCATATATATACACATATATATATATGGCATATATATACACATATATATATGGCATATATATACAC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13576:HG3_Ill_GATKHCSBGrefine_6923:HG2_Ill_GATKHCSBGrefine_7019:HG4_Ill_GATKHCSBGrefine_7151:HG3_Ill_GATKHCSBGrefine_6922:HG2_Ill_GATKHCSBGrefine_7018:HG4_Ill_GATKHCSBGrefine_7150:HG4_Ill_MetaSV_5599:HG3_Ill_MetaSV_5549:HG2_Ill_manta_2945:HG3_PB_HySA_15602:HG4_PB_HySA_15128:HG2_PB_HySA_18699:HG3_PB_pbsv_10043:HG4_Ill_MetaSV_5598:HG4_PB_SVrefine2Falcon1Dovetail_6319:HG4_Ill_SVrefine2DISCOVARDovetail_7446:HG3_PB_SVrefine2PBcRDovetail_4765:HG2_PB_SVrefine2PB10Xhap12_7530:HG2_PB_SVrefine2Falcon1plusDovetail_12383:HG2_10X_SVrefine210Xhap12_7343:HG2_PB_pbsv_10291:HG3_PB_SVrefine2Falcon1Dovetail_6222:HG3_Ill_SVrefine2DISCOVARDovetail_7678:HG2_10X_SVrefine210Xhap12_7342:HG2_Ill_tnscope_1175:HG4_PB_pbsv_10325:HG4_PB_SVrefine2PBcRDovetail_5165:HG2_PB_SVrefine2PBcRplusDovetail_11583:HG2_PB_SVrefine2Falcon2Bionano_4868;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7343:HG2_PB_SVrefine2Falcon1plusDovetail_12383:HG2_PB_SVrefine2PB10Xhap12_7530:HG3_PB_SVrefine2PBcRDovetail_4765:HG4_Ill_SVrefine2DISCOVARDovetail_7446:HG4_PB_SVrefine2Falcon1Dovetail_6319;NumExactMatchSVs=6;ClusterMaxShiftDist=0.134301;ClusterMaxSizeDiff=0.134301;ClusterMaxEditDist=0.134301;PBcalls=14;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-268;DistBack=3957;DistForward=-215;DistMin=-215;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=55;REFWIDENED=9:77319256-77319578;PctSeqSimilarity=0.9764;PctSizeSimilarity=0.9889;PctRecOverlap=0.9449;SizeDiff=-3;StartDistance=-12;EndDistance=-15;GTMatch=0;TruScore=97;MatchId=4183.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:1:24:1:17:./.:0:0:0:0:1/1:0:12:./.:.:.:.:.:.
chr9	77524150	HG3_Ill_scalpel_9987	CAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7344:HG3_PB_pbsv_10044:HG3_PB_HySA_15604:HG2_PB_HySA_18701:HG3_PB_assemblyticsfalcon_27678:HG2_PB_assemblyticsPBcR_27002:HG3_PB_SVrefine2Falcon1Dovetail_6223:HG3_Ill_svaba_13081:HG3_Ill_scalpel_9987:HG3_Ill_MetaSV_5550:HG3_Ill_Krunchall_13971:HG3_Ill_GATKHCSBGrefine_6924:HG3_CG_vcfBeta_5599:HG3_10X_allpass_2085:HG2_PB_SVrefine2PBcRplusDovetail_11584:HG2_PB_SVrefine2PB10Xhap12_7531:HG2_Ill_svaba_12921:HG2_Ill_scalpel_9860:HG2_Ill_manta_2946:HG2_Ill_SpiralSDKrefine_17872:HG2_Ill_MetaSV_5368:HG2_Ill_GATKHCSBGrefine_7020:HG2_10X_allpass_1723:HG2_PB_pbsv_10292:HG3_PB_SVrefine2PBcRDovetail_4766:HG3_Ill_SVrefine2DISCOVARDovetail_7679:HG2_PB_SVrefine2Falcon1plusDovetail_12384;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_1723:HG2_Ill_GATKHCSBGrefine_7020:HG2_Ill_MetaSV_5368:HG2_Ill_SpiralSDKrefine_17872:HG2_Ill_manta_2946:HG2_Ill_scalpel_9860:HG2_Ill_svaba_12921:HG2_PB_SVrefine2PB10Xhap12_7531:HG2_PB_SVrefine2PBcRplusDovetail_11584:HG3_10X_allpass_2085:HG3_CG_vcfBeta_5599:HG3_Ill_GATKHCSBGrefine_6924:HG3_Ill_Krunchall_13971:HG3_Ill_MetaSV_5550:HG3_Ill_scalpel_9987:HG3_Ill_svaba_13081:HG3_PB_SVrefine2Falcon1Dovetail_6223;NumExactMatchSVs=17;ClusterMaxShiftDist=0.016;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.0212766;PBcalls=11;Illcalls=12;TenXcalls=3;CGcalls=1;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=1;HG2count=14;HG3count=13;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-187;DistBack=5448;DistForward=-185;DistMin=-185;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=132;REFWIDENED=9:77524143-77524461;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:31:0|1:22:2:1:31:./.:0:0:0:0:0/1:15:10:./.:.:.:.:.:.
chr9	77661158	HG3_Ill_Krunchall_13972	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_10327:HG4_PB_assemblyticsfalcon_27175:HG4_Ill_svaba_13004:HG4_Ill_scalpel_9591:HG4_Ill_manta_2507:HG4_Ill_Krunchall_14502:HG4_Ill_GATKHC_16727:HG4_Ill_GATKHCSBGrefine_7152:HG4_Ill_250bpfermikitraw_13822:HG4_Ill_150bpfermikitraw_13234:HG4_10X_allpass_2001:HG3_Ill_svaba_13082:HG3_Ill_scalpel_9988:HG3_Ill_Krunchall_13972:HG3_Ill_GATKHC_16648:HG3_Ill_GATKHCSBGrefine_6925:HG3_Ill_250bpfermikitraw_13552:HG3_Ill_150bpfermikitraw_13128:HG3_10X_allpass_2086:HG2_Ill_svaba_12922:HG2_Ill_scalpel_9861:HG2_Ill_manta_2947:HG2_Ill_Krunchall_14256:HG2_Ill_GATKHC_16712:HG2_Ill_GATKHCSBGrefine_7021:HG2_Ill_250bpfermikitraw_13935:HG2_Ill_150bpfermikitraw_13086:HG2_PB_assemblyticsPBcR_27003:HG4_PB_HySA_15130:HG4_Ill_Spiral_854:HG3_Ill_Spiral_10908:HG3_PB_assemblyticsfalcon_27679:HG3_PB_pbsv_10045:HG2_PB_pbsv_10294;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13086:HG2_Ill_250bpfermikitraw_13935:HG2_Ill_GATKHCSBGrefine_7021:HG2_Ill_GATKHC_16712:HG2_Ill_Krunchall_14256:HG2_Ill_manta_2947:HG2_Ill_scalpel_9861:HG2_Ill_svaba_12922:HG3_10X_allpass_2086:HG3_Ill_150bpfermikitraw_13128:HG3_Ill_250bpfermikitraw_13552:HG3_Ill_GATKHCSBGrefine_6925:HG3_Ill_GATKHC_16648:HG3_Ill_Krunchall_13972:HG3_Ill_scalpel_9988:HG3_Ill_svaba_13082:HG4_10X_allpass_2001:HG4_Ill_150bpfermikitraw_13234:HG4_Ill_250bpfermikitraw_13822:HG4_Ill_GATKHCSBGrefine_7152:HG4_Ill_GATKHC_16727:HG4_Ill_Krunchall_14502:HG4_Ill_manta_2507:HG4_Ill_scalpel_9591:HG4_Ill_svaba_13004:HG4_PB_assemblyticsfalcon_27175;NumExactMatchSVs=26;ClusterMaxShiftDist=0.115702;ClusterMaxSizeDiff=0.115702;ClusterMaxEditDist=0.115702;PBcalls=7;Illcalls=25;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=73742;DistForward=-49;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:77661157-77661222;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:0|1:20:6:3:16:./.:0:0:0:0:0/1:8:20:./.:.:.:.:.:.
chr9	77998563	HG2_Ill_GATKHCSBGrefine_7022	CCAGTAATTCCTGCATTACTATGCAGGAATGCAGTAATTCCTGCATTACTATGCAGGAATGCAGTAATTCCTGCATTACTATGCAGGAATG	C	20	PASS	ClusterIDs=HG4_Ill_Spiral_855:HG4_PB_HySA_15134:HG3_PB_pbsv_10048:HG4_PB_pbsv_10331:HG2_PB_pbsv_10297:HG4_PB_SVrefine2PBcRDovetail_5168:HG4_PB_SVrefine2Falcon1Dovetail_6321:HG4_Ill_250bpfermikitraw_13825:HG3_PB_SVrefine2PBcRDovetail_4769:HG3_PB_SVrefine2Falcon1Dovetail_6225:HG3_Ill_SVrefine2DISCOVARDovetail_7684:HG3_Ill_250bpfermikitraw_13555:HG3_Ill_150bpfermikitraw_13133:HG2_PB_SVrefine2PBcRplusDovetail_11587:HG2_PB_SVrefine2PB10Xhap12_7534:HG2_PB_SVrefine2Falcon2Bionano_4870:HG2_PB_SVrefine2Falcon1plusDovetail_12387:HG2_Ill_SpiralSDKrefine_17876:HG2_Ill_SVrefine2DISCOVARplusDovetail_13581:HG2_Ill_GATKHCSBGrefine_7022:HG2_Ill_250bpfermikitraw_13940:HG2_Ill_150bpfermikitraw_13090:HG2_10X_SVrefine210Xhap12_7349;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13090:HG2_Ill_250bpfermikitraw_13940:HG2_Ill_GATKHCSBGrefine_7022:HG2_Ill_SVrefine2DISCOVARplusDovetail_13581:HG2_Ill_SpiralSDKrefine_17876:HG2_PB_SVrefine2Falcon1plusDovetail_12387:HG2_PB_SVrefine2Falcon2Bionano_4870:HG2_PB_SVrefine2PB10Xhap12_7534:HG2_PB_SVrefine2PBcRplusDovetail_11587:HG3_Ill_150bpfermikitraw_13133:HG3_Ill_250bpfermikitraw_13555:HG3_Ill_SVrefine2DISCOVARDovetail_7684:HG3_PB_SVrefine2Falcon1Dovetail_6225:HG3_PB_SVrefine2PBcRDovetail_4769:HG4_Ill_250bpfermikitraw_13825:HG4_PB_SVrefine2Falcon1Dovetail_6321:HG4_PB_SVrefine2PBcRDovetail_5168;NumExactMatchSVs=17;ClusterMaxShiftDist=0.2;ClusterMaxSizeDiff=0.2;ClusterMaxEditDist=0.295238;PBcalls=12;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-90;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=113;REFWIDENED=9:77998594-77998766;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:1:26:3:33:./.:0:0:0:0:1/1:0:39:./.:.:.:.:.:.
chr9	79157922	HG2_PB_SVrefine2PB10Xhap12_7540	AGGAAGCCGAAGCAGGTGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAGCATGGTGAAATCCCGTCTCTACTAAAAATACAAAAAATTTAGCTGGGCATGGTGGTGCGCACCTGTAATCCCAGCTACTTGGGAAGCTGAGGCAGGAGAACTGCTTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7353:HG4_Ill_Krunchall_14513:HG2_Ill_Krunchall_14262:HG4_PB_assemblyticsfalcon_27190:HG4_PB_SVrefine2Falcon1Dovetail_6331:HG3_PB_HySA_15616:HG4_PB_pbsv_10340:HG2_PB_HySA_18720:HG2_PB_pbsv_10303:HG4_PB_SVrefine2PBcRDovetail_5174:HG3_PB_pbsv_10056:HG4_10X_allpass_2005:HG3_10X_allpass_2088:HG2_Ill_SpiralSDKrefine_17880:HG2_Ill_GATKHCSBGrefine_7026:HG2_Ill_250bpfermikitraw_13944:HG2_Ill_150bpfermikitraw_13094:HG4_Ill_SVrefine2DISCOVARDovetail_7456:HG3_PB_SVrefine2PBcRDovetail_4773:HG2_PB_SVrefine2PBcRplusDovetail_11590:HG2_PB_SVrefine2PB10Xhap12_7540:HG2_PB_SVrefine2Falcon2Bionano_4874:HG2_PB_SVrefine2Falcon1plusDovetail_12391:HG2_Ill_SVrefine2DISCOVARplusDovetail_13588;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7353:HG4_Ill_SVrefine2DISCOVARDovetail_7456:HG3_PB_SVrefine2PBcRDovetail_4773:HG2_PB_SVrefine2PBcRplusDovetail_11590:HG2_PB_SVrefine2PB10Xhap12_7540:HG2_PB_SVrefine2Falcon2Bionano_4874:HG2_PB_SVrefine2Falcon1plusDovetail_12391:HG2_Ill_SVrefine2DISCOVARplusDovetail_13588;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0246914;ClusterMaxSizeDiff=0.0246914;ClusterMaxEditDist=0.0619195;PBcalls=13;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-161;DistBack=-162;DistForward=25219;DistMin=-162;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=161;REFWIDENED=9:79157923-79158244;PctSeqSimilarity=0.9659;PctSizeSimilarity=1;PctRecOverlap=0.7654;SizeDiff=0;StartDistance=-38;EndDistance=-38;GTMatch=0;TruScore=91;MatchId=4187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:38:./.:7:17:1:15:./.:0:0:0:0:0/1:9:21:./.:.:.:.:.:.
chr9	79406117	HG4_PB_SVrefine2PBcRDovetail_5175	TGTACCATATACTGCACCAATTATCATTGGTACAATAATACTGCACCAATTATCATTG	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4875:HG3_PB_assemblyticsfalcon_27689:HG2_PB_pbsv_10304:HG4_PB_SVrefine2PBcRDovetail_5175:HG3_PB_pbsv_10058:HG2_PB_SVrefine2PB10Xhap12_7541;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4875:HG4_PB_SVrefine2PBcRDovetail_5175:HG3_PB_pbsv_10058:HG2_PB_SVrefine2PB10Xhap12_7541;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0353982;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0884956;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-57;DistBack=16747;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=398;REFWIDENED=9:79406118-79406572;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9828;PctRecOverlap=0.8644;SizeDiff=-1;StartDistance=-7;EndDistance=-8;GTMatch=0;TruScore=94;MatchId=4188.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:23:0|1:36:2:4:27:./.:0:0:0:0:0/0:27:0:./.:.:.:.:.:.
chr9	79673739	HG2_PB_SVrefine2Falcon2Bionano_4877	GAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAAAGAAAGAAAGAAGGAAAGAAAGAAGGAAAGAAAGAAAAAGAAAGAAAGAAGGAAAGAA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_10308:HG3_Ill_scalpel_9998:HG3_Ill_GATKHC_16665:HG3_Ill_GATKHCSBGrefine_6931:HG2_PB_SVrefine2Falcon2Bionano_4877:HG2_Ill_scalpel_9869:HG2_Ill_manta_2949:HG2_Ill_SpiralSDKrefine_17882:HG2_Ill_SVrefine2DISCOVARplusDovetail_13589:HG2_Ill_GATKHC_16727:HG2_Ill_GATKHCSBGrefine_7028:HG2_PB_SVrefine2Falcon1plusDovetail_12392:HG3_PB_SVrefine2Falcon1Dovetail_6234:HG3_PB_assemblyticsfalcon_27693:HG3_Ill_MetaSV_5553:HG2_PB_assemblyticsfalcon_27764:HG3_PB_pbsv_10063;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7028:HG2_Ill_GATKHC_16727:HG2_Ill_SVrefine2DISCOVARplusDovetail_13589:HG2_Ill_SpiralSDKrefine_17882:HG2_Ill_manta_2949:HG2_Ill_scalpel_9869:HG2_PB_SVrefine2Falcon2Bionano_4877:HG3_Ill_GATKHCSBGrefine_6931:HG3_Ill_GATKHC_16665:HG3_Ill_scalpel_9998;NumExactMatchSVs=10;ClusterMaxShiftDist=0.22449;ClusterMaxSizeDiff=0.22449;ClusterMaxEditDist=0.22449;PBcalls=7;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-102;DistBack=1;DistForward=-85;DistMin=-85;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:79673740-79673842;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:26:./.:20:11:10:13:./.:0:0:0:0:0/1:9:17:./.:.:.:.:.:.
chr9	79702108	HG4_Ill_manta_2510	AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_10309:HG4_PB_pbsv_10342:HG2_PB_assemblyticsPBcR_27020:HG4_Ill_svaba_13016:HG4_Ill_manta_2510:HG4_Ill_Krunchall_14517:HG4_Ill_GATKHC_16743:HG4_Ill_GATKHCSBGrefine_7159:HG4_Ill_250bpfermikitraw_13835:HG4_Ill_150bpfermikitraw_13246:HG4_10X_allpass_2006:HG2_Ill_svaba_12933:HG2_Ill_manta_2950:HG2_Ill_SpiralSDKrefine_17883:HG2_Ill_Krunchall_14265:HG2_Ill_GATKHC_16729:HG2_Ill_GATKHCSBGrefine_7029:HG2_Ill_250bpfermikitraw_13946:HG2_Ill_150bpfermikitraw_13097:HG4_Ill_Spiral_857:HG2_Ill_Spiral_730:HG2_PB_HySA_18725:HG4_Ill_SVrefine2DISCOVARDovetail_7460:HG2_Ill_SVrefine2DISCOVARplusDovetail_13590:HG2_10X_SVrefine210Xhap12_7357:HG4_PB_SVrefine2PBcRDovetail_5176:HG2_PB_SVrefine2Falcon1plusDovetail_12393;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13097:HG2_Ill_250bpfermikitraw_13946:HG2_Ill_GATKHCSBGrefine_7029:HG2_Ill_GATKHC_16729:HG2_Ill_Krunchall_14265:HG2_Ill_SpiralSDKrefine_17883:HG2_Ill_manta_2950:HG2_Ill_svaba_12933:HG4_10X_allpass_2006:HG4_Ill_150bpfermikitraw_13246:HG4_Ill_250bpfermikitraw_13835:HG4_Ill_GATKHCSBGrefine_7159:HG4_Ill_GATKHC_16743:HG4_Ill_Krunchall_14517:HG4_Ill_manta_2510:HG4_Ill_svaba_13016;NumExactMatchSVs=16;ClusterMaxShiftDist=0.138365;ClusterMaxSizeDiff=0.138365;ClusterMaxEditDist=0.138365;PBcalls=6;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-82;DistBack=26328;DistForward=-82;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=35;REFWIDENED=9:79702105-79702221;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:0|1:26:5:2:17:./.:0:0:0:0:0/1:25:17:./.:.:.:.:.:.
chr9	81725761	HG4_10X_allpass_2008	ACTAATGCAGGATTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGTGCGCCACCATGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCATCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7365:HG4_Ill_Krunchall_14532:HG3_Ill_Krunchall_14005:HG2_Ill_Krunchall_14283:HG4_Ill_Krunchall_14531:HG3_Ill_Krunchall_14004:HG2_Ill_Krunchall_14282:HG4_PB_assemblyticsfalcon_27206:HG2_PB_assemblyticsPBcR_27036:HG3_PB_assemblyticsfalcon_27705:HG2_PB_assemblyticsfalcon_27786:HG3_PB_HySA_15636:HG2_PB_pbsv_10319:HG4_PB_pbsv_10353:HG3_PB_pbsv_10072:HG4_Ill_MetaSV_5607:HG3_Ill_MetaSV_5556:HG2_Ill_tnscope_1176:HG2_Ill_MetaSV_5374:HG4_PB_SVrefine2PBcRDovetail_5182:HG4_PB_SVrefine2Falcon1Dovetail_6337:HG4_PB_HySA_15156:HG4_Ill_svaba_13031:HG4_Ill_scalpel_9612:HG4_Ill_manta_2513:HG4_Ill_SVrefine2DISCOVARDovetail_7469:HG4_Ill_GATKHCSBGrefine_7170:HG4_10X_allpass_2008:HG3_PB_SVrefine2PBcRDovetail_4783:HG3_PB_SVrefine2Falcon1Dovetail_6241:HG3_Ill_svaba_13116:HG3_Ill_scalpel_10009:HG3_Ill_manta_2419:HG3_Ill_SVrefine2DISCOVARDovetail_7704:HG3_Ill_GATKHCSBGrefine_6939:HG3_10X_allpass_2090:HG2_PB_SVrefine2PBcRplusDovetail_11600:HG2_PB_SVrefine2PB10Xhap12_7551:HG2_PB_SVrefine2Falcon2Bionano_4886:HG2_PB_SVrefine2Falcon1plusDovetail_12402:HG2_Ill_svaba_12951:HG2_Ill_scalpel_9881:HG2_Ill_manta_2952:HG2_Ill_SVrefine2DISCOVARplusDovetail_13600:HG2_Ill_GATKHCSBGrefine_7036:HG2_10X_allpass_1724;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7365:HG4_PB_SVrefine2PBcRDovetail_5182:HG4_PB_SVrefine2Falcon1Dovetail_6337:HG4_PB_HySA_15156:HG4_Ill_svaba_13031:HG4_Ill_scalpel_9612:HG4_Ill_manta_2513:HG4_Ill_SVrefine2DISCOVARDovetail_7469:HG4_Ill_GATKHCSBGrefine_7170:HG4_10X_allpass_2008:HG3_PB_SVrefine2PBcRDovetail_4783:HG3_PB_SVrefine2Falcon1Dovetail_6241:HG3_Ill_svaba_13116:HG3_Ill_scalpel_10009:HG3_Ill_manta_2419:HG3_Ill_SVrefine2DISCOVARDovetail_7704:HG3_Ill_GATKHCSBGrefine_6939:HG3_10X_allpass_2090:HG2_PB_SVrefine2PBcRplusDovetail_11600:HG2_PB_SVrefine2PB10Xhap12_7551:HG2_PB_SVrefine2Falcon2Bionano_4886:HG2_PB_SVrefine2Falcon1plusDovetail_12402:HG2_Ill_svaba_12951:HG2_Ill_scalpel_9881:HG2_Ill_manta_2952:HG2_Ill_SVrefine2DISCOVARplusDovetail_13600:HG2_Ill_GATKHCSBGrefine_7036:HG2_10X_allpass_1724;NumExactMatchSVs=28;ClusterMaxShiftDist=0.105096;ClusterMaxSizeDiff=0.105096;ClusterMaxEditDist=0.105096;PBcalls=17;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=3575;DistForward=11449;DistMin=3575;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=9:81725762-81726099;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:1:21:1:23:./.:0:0:0:0:1/1:0:53:0/1:2:8:.:.:.
chr9	82845170	HG3_Ill_GATKHCSBGrefine_6943	TTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGTTTTC	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_14292:HG4_PB_assemblyticsfalcon_27215:HG2_PB_PB10Xdip_31693:HG2_PB_SVrefine2PB10Xhap12_7554:HG2_10X_allpass_1725:HG3_PB_HySA_15643:HG4_PB_pbsv_10359:HG3_PB_pbsv_10076:HG2_PB_pbsv_10325:HG4_PB_SVrefine2PBcRDovetail_5183:HG4_PB_SVrefine2Falcon1Dovetail_6339:HG4_PB_HySA_15171:HG4_Ill_manta_2515:HG4_Ill_GATKHCSBGrefine_7175:HG4_10X_allpass_2009:HG3_PB_assemblyticsfalcon_27712:HG3_PB_SVrefine2PBcRDovetail_4785:HG3_PB_SVrefine2Falcon1Dovetail_6243:HG3_Ill_scalpel_10018:HG3_Ill_GATKHCSBGrefine_6943:HG3_10X_allpass_2091:HG2_PB_SVrefine2PB10Xhap12_7553:HG2_PB_SVrefine2Falcon2Bionano_4887:HG2_Ill_GATKHCSBGrefine_7040:HG2_10X_SVrefine210Xhap12_7368:HG4_Ill_Spiral_858:HG4_Ill_MetaSV_5609:HG3_Ill_Spiral_10942:HG3_Ill_MetaSV_5557:HG2_PB_assemblyticsfalcon_27794:HG2_PB_SVrefine2Falcon1plusDovetail_12404:HG2_PB_HySA_18746:HG2_Ill_Spiral_731:HG2_Ill_MetaSV_5376:HG2_10X_SVrefine210Xhap12_7367:HG2_Ill_tnscope_1177:HG2_PB_SVrefine2PBcRplusDovetail_11602:HG2_PB_assemblyticsPBcR_27044:HG4_Ill_Krunchall_14549:HG3_Ill_Krunchall_14018;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7368:HG2_Ill_GATKHCSBGrefine_7040:HG2_PB_SVrefine2Falcon2Bionano_4887:HG2_PB_SVrefine2PB10Xhap12_7553:HG3_10X_allpass_2091:HG3_Ill_GATKHCSBGrefine_6943:HG3_Ill_scalpel_10018:HG3_PB_SVrefine2Falcon1Dovetail_6243:HG3_PB_SVrefine2PBcRDovetail_4785:HG3_PB_assemblyticsfalcon_27712:HG4_10X_allpass_2009:HG4_Ill_GATKHCSBGrefine_7175:HG4_Ill_manta_2515:HG4_PB_HySA_15171:HG4_PB_SVrefine2Falcon1Dovetail_6339:HG4_PB_SVrefine2PBcRDovetail_5183;NumExactMatchSVs=16;ClusterMaxShiftDist=0.188198;ClusterMaxSizeDiff=0.188198;ClusterMaxEditDist=0.317308;PBcalls=20;Illcalls=15;TenXcalls=5;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-426;DistForward=-322;DistMin=-426;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=9:82845165-82845505;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:39:0|1:30:2:2:38:./.:0:0:0:0:0/1:29:22:0/1:36:10:.:.:.
chr9	83269010	HG2_PB_PB10Xdip_31694	ACAGGGACAATTTGACTTCCTCTTTTTTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAGTGCTATCCCTCCCCCCTCCCCCCACCCCACAACAGTCCCCAGAGTGTGATATTCCCCTTCCTCTGTCCGTGTGATCTCATTGTTCAGTTCCTACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGTGATAGTTTACTGAGAATGATGATTTCCAGTTCAATCCATGTCCCTAAAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGATGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAGTGGGATGGCTGGGTCAAACGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATATCATTGTGATTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGCGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTTTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTTAGATGAGTAGGTTGCGAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCCTCTAGGGTTTTTATGGTTTTAGATCTAATGTTTAAGTCTTTAATCCATCTTCAATTGATTTTTGTATAAGGTGTAAGGAAGGCATCCAGTGTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCCTTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGACCAGATAGTTGTAGATCTGCGGCGTTATTTCTGAGGGCTCTGTTCTGTTCCATTGGTCTATATCTCTGTTTTGGTACCAGTACCATGCTTTTTTTGTTACTGTAGCCTTGTAGTATAGTTAGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGACTTAGGATTGCCTTGGCGATGCAAGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCGGTGAAGAAAGGCATTGGTGGCTTGATGAGGATGGCATTGAATCTGTAAATTACCTTGGGCAGAATGGCCATTTTCACTACATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCTTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCCGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGGTATAC	CAGATGCTGACTTTTCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6340:HG2_PB_SVrefine2PB10Xhap12_7555:HG2_PB_PB10Xdip_31694:HG3_PB_pbsv_10078:HG3_Ill_MetaSV_5559:HG2_Ill_MetaSV_5377:HG2_PB_SVrefine2Falcon1plusDovetail_12405;NumClusterSVs=7;ExactMatchIDs=HG2_PB_PB10Xdip_31694:HG2_PB_SVrefine2PB10Xhap12_7555;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0373926;ClusterMaxSizeDiff=0.0373926;ClusterMaxEditDist=0.118242;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-1933;DistBack=-1950;DistForward=-1938;DistMin=-1950;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=9:83269010-83270959;PctSeqSimilarity=0.7463;PctSizeSimilarity=0.9827;PctRecOverlap=0.9909;SizeDiff=-34;StartDistance=8;EndDistance=-10;GTMatch=0;TruScore=90;MatchId=4193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:20:0|1:35:1:1:16:./.:0:0:0:0:0/0:52:0:0/1:151:65:1926:.:.
chr9	83385330	HG4_Ill_250bpfermikitraw_13877	ATAAAATAAATAAAATAAATAAAATAAATAAAATTAAATAAAATTAAATAAAATATAAATAAAATAAAATAAAAAAATAAAATAAAAT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_10362:HG4_Ill_GATKHC_16790:HG4_Ill_GATKHCSBGrefine_7178:HG2_Ill_GATKHC_16770:HG2_Ill_GATKHCSBGrefine_7046:HG4_PB_HySA_15176:HG4_PB_assemblyticsfalcon_27224:HG4_Ill_scalpel_9625:HG4_Ill_Krunchall_14557:HG2_Ill_Krunchall_14303:HG2_Ill_Krunchall_14302:HG4_Ill_manta_2517:HG2_Ill_SpiralSDKrefine_17909:HG4_Ill_svaba_13053:HG4_Ill_250bpfermikitraw_13877:HG4_Ill_150bpfermikitraw_13285:HG2_Ill_250bpfermikitraw_13987:HG2_Ill_150bpfermikitraw_13135:HG2_PB_HySA_18755:HG2_PB_pbsv_10329;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13135:HG2_Ill_250bpfermikitraw_13987:HG4_Ill_150bpfermikitraw_13285:HG4_Ill_250bpfermikitraw_13877:HG4_Ill_svaba_13053;NumExactMatchSVs=5;ClusterMaxShiftDist=0.322581;ClusterMaxSizeDiff=0.322581;ClusterMaxEditDist=0.322581;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=-87;DistBack=23;DistForward=-82;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=9:83385329-83385418;PctSeqSimilarity=0.9708;PctSizeSimilarity=0.9425;PctRecOverlap=0.9432;SizeDiff=5;StartDistance=-5;EndDistance=0;GTMatch=0;TruScore=95;MatchId=4194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:35:0|1:37:3:2:29:./.:0:0:0:0:0/1:28:26:./.:.:.:.:.:.
chr9	83485894	HG2_Ill_scalpel_9896	TATGTTATATAATATACATATGTTATATATGTGTAATATATATAATATGTGTA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_10080:HG4_PB_HySA_15179:HG4_Ill_GATKHC_16792:HG4_Ill_GATKHCSBGrefine_7180:HG3_Ill_GATKHC_16708:HG3_Ill_GATKHCSBGrefine_6949:HG2_Ill_GATKHC_16772:HG2_Ill_GATKHCSBGrefine_7048:HG4_Ill_manta_2519:HG3_Ill_manta_2421:HG2_Ill_manta_2954:HG2_PB_assemblyticsPBcR_27052:HG2_PB_HySA_18758:HG3_PB_assemblyticsfalcon_27720:HG2_PB_pbsv_10331:HG4_PB_assemblyticsfalcon_27227:HG4_Ill_svaba_13055:HG4_Ill_scalpel_9627:HG4_Ill_Krunchall_14559:HG4_Ill_250bpfermikitraw_13879:HG4_Ill_150bpfermikitraw_13287:HG3_Ill_svaba_13135:HG3_Ill_scalpel_10024:HG3_Ill_Krunchall_14027:HG3_Ill_250bpfermikitraw_13606:HG3_Ill_150bpfermikitraw_13181:HG2_PB_assemblyticsfalcon_27801:HG2_Ill_svaba_12973:HG2_Ill_scalpel_9896:HG2_Ill_Krunchall_14305:HG2_Ill_250bpfermikitraw_13989:HG2_Ill_150bpfermikitraw_13137:HG4_PB_pbsv_10364;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13137:HG2_Ill_250bpfermikitraw_13989:HG2_Ill_Krunchall_14305:HG2_Ill_scalpel_9896:HG2_Ill_svaba_12973:HG2_PB_assemblyticsfalcon_27801:HG3_Ill_150bpfermikitraw_13181:HG3_Ill_250bpfermikitraw_13606:HG3_Ill_Krunchall_14027:HG3_Ill_scalpel_10024:HG3_Ill_svaba_13135:HG4_Ill_150bpfermikitraw_13287:HG4_Ill_250bpfermikitraw_13879:HG4_Ill_Krunchall_14559:HG4_Ill_scalpel_9627:HG4_Ill_svaba_13055:HG4_PB_assemblyticsfalcon_27227;NumExactMatchSVs=17;ClusterMaxShiftDist=0.269231;ClusterMaxSizeDiff=0.269231;ClusterMaxEditDist=0.269231;PBcalls=9;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=15400;DistForward=-15;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=9:83485893-83485949;PctSeqSimilarity=0.9541;PctSizeSimilarity=0.9123;PctRecOverlap=0.8793;SizeDiff=-5;StartDistance=-2;EndDistance=-7;GTMatch=0;TruScore=91;MatchId=4195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:45:0|1:44:4:2:48:./.:0:0:0:0:0/1:32:22:./.:.:.:.:.:.
chr9	83630437	HG3_10X_allpass_2093	TAAGAAATTCAATTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7372:HG4_PB_pbsv_10367:HG4_Ill_Krunchall_14562:HG3_PB_pbsv_10084:HG2_Ill_Krunchall_14307:HG3_PB_assemblyticsfalcon_27723:HG2_PB_assemblyticsfalcon_27805:HG2_PB_assemblyticsPBcR_27056:HG2_PB_pbsv_10335:HG2_PB_HySA_18765:HG3_PB_HySA_15652:HG4_Ill_MetaSV_5613:HG3_Ill_MetaSV_5560:HG2_Ill_MetaSV_5379:HG4_Ill_svaba_13057:HG4_Ill_scalpel_9631:HG4_Ill_manta_2522:HG4_Ill_GATKHCSBGrefine_7183:HG4_10X_allpass_2012:HG3_Ill_svaba_13138:HG3_Ill_scalpel_10026:HG3_Ill_manta_2423:HG3_Ill_GATKHCSBGrefine_6954:HG3_10X_allpass_2093:HG2_Ill_svaba_12976:HG2_Ill_manta_2956:HG2_Ill_SVrefine2DISCOVARplusDovetail_13606:HG2_Ill_GATKHCSBGrefine_7052:HG2_10X_allpass_1727:HG2_Ill_breakscan11_1495:HG2_Ill_tnscope_1179:HG4_PB_SVrefine2PBcRDovetail_5188:HG4_Ill_SVrefine2DISCOVARDovetail_7478:HG3_PB_SVrefine2PBcRDovetail_4790:HG3_PB_SVrefine2Falcon1Dovetail_6248:HG2_PB_SVrefine2PBcRplusDovetail_11607:HG2_PB_SVrefine2PB10Xhap12_7561:HG2_PB_SVrefine2Falcon2Bionano_4893:HG2_PB_SVrefine2Falcon1plusDovetail_12407:HG2_Ill_SVrefine2DISCOVARplusDovetail_13605;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_1727:HG2_Ill_GATKHCSBGrefine_7052:HG2_Ill_SVrefine2DISCOVARplusDovetail_13606:HG2_Ill_manta_2956:HG2_Ill_svaba_12976:HG3_10X_allpass_2093:HG3_Ill_GATKHCSBGrefine_6954:HG3_Ill_manta_2423:HG3_Ill_scalpel_10026:HG3_Ill_svaba_13138:HG4_10X_allpass_2012:HG4_Ill_GATKHCSBGrefine_7183:HG4_Ill_manta_2522:HG4_Ill_scalpel_9631:HG4_Ill_svaba_13057;NumExactMatchSVs=15;ClusterMaxShiftDist=0.128079;ClusterMaxSizeDiff=0.128079;ClusterMaxEditDist=0.128079;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-313;DistBack=2717;DistForward=5726;DistMin=2717;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=9:83630433-83630765;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:34:1/1:1:16:1:12:./.:0:0:0:0:1/1:0:54:./.:1:10:.:.:.
chr9	83967917	HG2_10X_SVrefine210Xhap12_7374	ATTTATAGCTGTAAGTGCCTACATCAATAAAGAAAAAACCTTCAACTCCTTGGTTAGGTATATTCCTAAGTTTATGTTTGTTTGATTGATTTTTTTTTTTTTTTTTTTTTGCAGCTATTGTAAAAGGGGCTGAGTTCTTGACTTGATTCTCTGCTTGGTCGTTGTTGGTGTATAGATGAGCTACTGATTTTTGCACATTAATCTTGTATCTGGAAACTTTGCTGAATTCTTTTATCAGTTCTGGGAGCTTTCTGGAGAAGCCCTTAGGGTTTTCAAGGTAAACAATCCTATCGTCAGCATACAGTGACAGTTTGACTTCCTCTTTACTGATTTGGATGCCCTTTATTTCTTTCTCTTGCCTGATTGCTCTGGCTAGGTTTCCAGTACTATGTTGAAGAGGTGTGGTGAGAGTGGACATCCTCGTCTTGTTCTAGTTCTCAGAGGGAATGTTTTCAACTTTTCCCTATTCAGTATTATGTTGGCTGTGGGTTTATCATAGATGGCTTTTATTATATTAAGGTATGTCCCTTGTATGCCAGTTTTGCTGAGAGCTTTAATCATAAAGGGATGCTGGATTTTGTCAAATGCTTTTTCTGCATCTATTGAGATGATCATGTGATTTTTGCTTTTAATTCTGTTTATGTGGTATATCACATTGATTGACTTGCATATGTTCAACCATCCCTGCATCCCTGGTATGAAACCCACTTGATTATGGTGGATTACCTTTTTGATATGTTGTTGGATTTTGTTAGCTAGTATTTCGTTAAGGATTTTATCATCTATGTTCATCAAGGATCTTGGTCTATGGTTTTCTTTGTTATGGCCTTTCCTGGTTTTGGTATTAAGGTGATGCTGTCTTCATAGAATGAATTAGGGAAGGTTCCTTCTTTTTCTATCTCATGGAATCGTGTCAAAAGGATTGGTACCAATTCTTCTTTGAATGTCTGGTGGAATTCTGCTGTAAATCATCTGGTCCCAGAATTTTTTTTTGTTGGTAATTTTTTAATTACCATTTCAATCTTGCTGCTTGTCATTGGTCGGTTCAGGGTATCTAATTCTTCCTGATTTAAGCTAAGAGGGTTGTATTTTTCAGGAATTTATCCATCTCTCCTAGGTTTTCTAGTTTATGTGTGTAAAGGTGTTCATACTAGCCTTGAATAATCTTTTGTATTTCAGTGGTGTCAGTTGTAACATCTCCTGTTTCATTTCTTAGTGAGGTTAGTTGGATTTTCTCTCTTCTTTTCTTGGTTAATCTTGCTAATGGTGTGTCAATTTTACTTATCTTTTCAAATAACCAGATTTTTGCTTCATTTATCAGTTAAATTTTCTTGTTTCAATTTCATTTAGTTCTGCTCTGATCTTGGTTGCTTCCCTTCTTTTGCTGGGTTTGGATTTGGTTTATTCTTGTTTCTCTAGTTCCTTGAGGTGTGACCTTAGAATGCCAGTTTGTGCTTTTTCAGTCTTTTTGATGTAGGCGTTTAGGGATATGAACTTTCCTCTTAGTACCACTTTTGCCGTATTCATGGAAAACTACAAAACACTGCTAGAAGAAATCATAGATGACACAAACAAATGGAAACACATCCCATGCTCATGGATGGGTAGAATCAATATTGTGAAAATGACCATACTGCCAAAAGCAATCTACAACTTCAATGCAATCTCCATCAAAATACCACCATCATTCTTCACAGAATTAGAAAAAACAATTCTAAAATTCATATGGAACCAAAAAAGAGCCCAGATAGCTAAAGCAAGATTAAGCAAAAAGAACAAATCTGGAGGCAACACGCTACCTGATTTCAAACTATGCTATAAGGCCATAGTCAACCAAAACAGCATGGTACTGGTATAAAAATAGGCACGTAGGCCAATGGAACAGAATAGACAATGCAGAAATAAACCCAAATACTTACAGCAAACTGATCATTGACAAAGCAAACAAAAACATAAAGTGGGGAAAGGGCATCCTTCCAACAAATGGTGCTGGGATAACTGGCTAGCCACATGTAGGAGAATGAAACTGCATCCTCGTCTCTCACCTTCTACTAAAATCAACTCAAGATGGATTAAGGACTTAAACCTAAGACCCCAAACTATAAAAAAATTCTAGAAGATAAAATTGGAAAAACCCTTTTAGATATCGGCTTAGGCAAGGATTTCATGACCAAGAATCCAAAAGAAAATGCAATAAAAACAAAGATAAATAGCTGGGACTTAATTAAACTAAAGGGCTTTGCCCGGAAAAGGAACAGTCAACAGAGTAAACAGACAACCCACAAAGCGTGAGAAAATCTTCACAATCTATATGTCTGACAAAGGAATAATATCCAGAATCTATAACAAATTCAAACAAATCAGTAAGAAAAAAAAAGCAGTCTCATCAAAAAGGGGGCTAAGGACATGAATAGACAATTCTCAAAAGAAGATATACAAATGGTCAGCAAACAAGAAAAAATGCTCAACATCACTAGTGATCAGGGAAATGCAAATCAAAATGACAATGCAATAGCACTTATACTCCTGAAGAGTGGCCATAATCAAAAACTCAAAAAATAGTAGATGTTGGCATGGATGCTGTGAACAGGGGAGAATTCTACACTGCTGGTGGGAATGTAAACTAGTACAGCCACTACAGAAAACAGTGTGGAGATTCCATAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCCACCCAGAGGAAAGGGAGTCATTATTTGAAAAAGATACTTGCACACGCATG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7374:HG4_PB_pbsv_10369:HG4_10X_allpass_2013:HG2_10X_allpass_1728:HG4_Ill_Krunchall_14565:HG2_PB_assemblyticsfalcon_27808:HG2_PB_HySA_18770:HG2_Ill_tnscope_1180:HG4_PB_SVrefine2PBcRDovetail_5190:HG4_Ill_SVrefine2DISCOVARDovetail_7480:HG4_Ill_MetaSV_5615:HG4_Ill_GATKHCSBGrefine_7185:HG2_PB_pbsv_10337:HG2_PB_SVrefine2PBcRplusDovetail_11609:HG2_PB_SVrefine2PB10Xhap12_7563:HG2_PB_SVrefine2Falcon1plusDovetail_12409:HG2_Ill_breakscan11_1496:HG2_Ill_SpiralSDKrefine_17913:HG2_Ill_SVrefine2DISCOVARplusDovetail_13608:HG2_Ill_MetaSV_5381;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7374:HG4_PB_SVrefine2PBcRDovetail_5190:HG4_Ill_SVrefine2DISCOVARDovetail_7480:HG4_Ill_MetaSV_5615:HG4_Ill_GATKHCSBGrefine_7185:HG2_PB_pbsv_10337:HG2_PB_SVrefine2PBcRplusDovetail_11609:HG2_PB_SVrefine2PB10Xhap12_7563:HG2_PB_SVrefine2Falcon1plusDovetail_12409:HG2_Ill_breakscan11_1496:HG2_Ill_SpiralSDKrefine_17913:HG2_Ill_SVrefine2DISCOVARplusDovetail_13608:HG2_Ill_MetaSV_5381;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0054338;ClusterMaxSizeDiff=0.0054338;ClusterMaxEditDist=0.0054338;PBcalls=8;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2766;DistBack=56376;DistForward=-2766;DistMin=-2766;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=9:83967918-83970691;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:66:0|1:43:0:0:28:./.:0:0:0:0:0/1:52:12:0/1:208:120:2801:.:.
chr9	84126162	HG4_Ill_GATKHCSBGrefine_7186	TTATATATATATATATATATATATATATATATATATATATATATATATATATATA	T	20	PASS	ClusterIDs=HG3_Ill_GATKHCSBGrefine_6956:HG2_PB_HySA_18771:HG2_PB_PB10Xdip_31704:HG3_Ill_GATKHC_16714:HG3_Ill_GATKHCSBGrefine_6957:HG2_Ill_GATKHC_16779:HG2_Ill_GATKHCSBGrefine_7055:HG2_Ill_manta_2958:HG2_PB_assemblyticsPBcR_27060:HG4_PB_assemblyticsfalcon_27233:HG2_PB_assemblyticsfalcon_27809:HG2_PB_pbsv_10338:HG4_PB_pbsv_10370:HG3_PB_assemblyticsfalcon_27726:HG3_PB_pbsv_10086:HG3_PB_HySA_15654:HG3_Ill_Krunchall_14031:HG3_Ill_150bpfermikitraw_13185:HG2_Ill_Krunchall_14310:HG2_Ill_250bpfermikitraw_13996:HG2_Ill_150bpfermikitraw_13142:HG4_Ill_SVrefine2DISCOVARDovetail_7481:HG4_Ill_Krunchall_14566:HG4_Ill_GATKHC_16796:HG4_Ill_GATKHCSBGrefine_7186:HG4_Ill_250bpfermikitraw_13886:HG2_Ill_GATKHC_16778:HG2_Ill_GATKHCSBGrefine_7054:HG2_10X_SVrefine210Xhap12_7375:HG3_Ill_GATKHC_16713;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7375:HG2_Ill_GATKHCSBGrefine_7054:HG2_Ill_GATKHC_16778:HG4_Ill_250bpfermikitraw_13886:HG4_Ill_GATKHCSBGrefine_7186:HG4_Ill_GATKHC_16796:HG4_Ill_Krunchall_14566:HG4_Ill_SVrefine2DISCOVARDovetail_7481;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.0727273;PBcalls=10;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-54;DistBack=127154;DistForward=28546;DistMin=28546;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=9:84126163-84126247;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:0:30:2:24:./.:0:0:0:0:1/1:1:27:./.:.:.:.:.:.
chr9	84324348	HG4_PB_SVrefine2Falcon1Dovetail_6345	CTAAAATGGCTCTAGCGCCCTCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCTCTCCCTCTCCGTCTCCCTCTCGCTCTCCGTCTCCCTCTCGCTCTCCCTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCATCCTCCCTGCCTGATTCTCCTGCCTCAGTCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACAGGGTTTCGCTGTGTTGGCCGGGCCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAACCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTACACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCTGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCACCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCTGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCCGCCCGGCCAGCTGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCGGCCCCCCGCCCGACCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCACGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGGTCAGCCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCAGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCCTTGTGGAATAGAAAGGCGGGAAAGGCGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGTCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAATAAATAAATAAATAAATAAATAAATAAATAAAATAAAAAAAAAAAAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG4_PB_HySA_15190:HG4_10X_allpass_2014:HG2_10X_allpass_1729:HG3_10X_allpass_2094:HG2_PB_HySA_18774:HG4_Ill_Krunchall_14569:HG4_PB_assemblyticsfalcon_27234:HG3_PB_assemblyticsfalcon_27728:HG2_PB_assemblyticsfalcon_27811:HG2_PB_assemblyticsPBcR_27062:HG3_PB_HySA_15656:HG2_Ill_tnscope_1181:HG4_PB_pbsv_10371:HG4_PB_SVrefine2PBcRDovetail_5191:HG4_PB_SVrefine2Falcon1Dovetail_6345:HG4_Ill_SVrefine2DISCOVARDovetail_7483:HG4_Ill_MetaSV_5616:HG4_Ill_GATKHCSBGrefine_7187:HG3_PB_pbsv_10087:HG3_PB_SVrefine2PBcRDovetail_4792:HG3_PB_SVrefine2Falcon1Dovetail_6250:HG3_Ill_SVrefine2DISCOVARDovetail_7718:HG3_Ill_MetaSV_5562:HG3_Ill_GATKHCSBGrefine_6958:HG2_PB_pbsv_10339:HG2_PB_SVrefine2PBcRplusDovetail_11610:HG2_PB_SVrefine2PB10Xhap12_7564:HG2_PB_SVrefine2Falcon2Bionano_4895:HG2_PB_SVrefine2Falcon1plusDovetail_12410:HG2_Ill_breakscan11_1497:HG2_Ill_SVrefine2DISCOVARplusDovetail_13610:HG2_Ill_MetaSV_5382:HG2_Ill_GATKHCSBGrefine_7056:HG2_10X_SVrefine210Xhap12_7377;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7377:HG2_Ill_GATKHCSBGrefine_7056:HG2_Ill_MetaSV_5382:HG2_Ill_SVrefine2DISCOVARplusDovetail_13610:HG2_Ill_breakscan11_1497:HG2_PB_SVrefine2Falcon1plusDovetail_12410:HG2_PB_SVrefine2Falcon2Bionano_4895:HG2_PB_SVrefine2PB10Xhap12_7564:HG2_PB_SVrefine2PBcRplusDovetail_11610:HG2_PB_pbsv_10339:HG3_Ill_GATKHCSBGrefine_6958:HG3_Ill_MetaSV_5562:HG3_Ill_SVrefine2DISCOVARDovetail_7718:HG3_PB_SVrefine2Falcon1Dovetail_6250:HG3_PB_SVrefine2PBcRDovetail_4792:HG3_PB_pbsv_10087:HG4_Ill_GATKHCSBGrefine_7187:HG4_Ill_MetaSV_5616:HG4_Ill_SVrefine2DISCOVARDovetail_7483:HG4_PB_SVrefine2Falcon1Dovetail_6345:HG4_PB_SVrefine2PBcRDovetail_5191:HG4_PB_pbsv_10371;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0147458;ClusterMaxSizeDiff=0.0147458;ClusterMaxEditDist=0.0147458;PBcalls=18;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-2578;DistBack=12160;DistForward=602;DistMin=602;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=9:84324349-84326941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:83:1/1:0:30:0:16:./.:0:0:0:0:1/1:0:20:1/1:3:134:3406:.:.
chr9	84477072	HG3_Ill_GATKHCSBGrefine_6960	ACTCTTTCTCTTTTTTTTTTTTTTTTATTTTATTTATTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_10089:HG3_Ill_Krunchall_14037:HG4_PB_HySA_15191:HG4_Ill_Spiral_859:HG2_PB_HySA_18776:HG2_Ill_Spiral_732:HG3_PB_HySA_15658:HG3_Ill_MetaSV_5563:HG2_Ill_tnscope_1182:HG2_Ill_MetaSV_5383:HG4_PB_pbsv_10372:HG4_PB_SVrefine2PBcRDovetail_5192:HG4_PB_SVrefine2Falcon1Dovetail_6346:HG4_Ill_MetaSV_5617:HG4_Ill_GATKHCSBGrefine_7188:HG4_10X_allpass_2015:HG3_PB_SVrefine2PBcRDovetail_4793:HG3_Ill_GATKHCSBGrefine_6960:HG3_10X_allpass_2095:HG2_PB_pbsv_10341:HG2_PB_SVrefine2PBcRplusDovetail_11611:HG2_PB_SVrefine2PB10Xhap12_7565:HG2_PB_SVrefine2Falcon2Bionano_4896:HG2_PB_SVrefine2Falcon1plusDovetail_12411:HG2_Ill_scalpel_9905:HG2_Ill_manta_2959:HG2_Ill_SVrefine2DISCOVARplusDovetail_13611:HG2_Ill_GATKHCSBGrefine_7058:HG2_10X_allpass_1730:HG2_10X_SVrefine210Xhap12_7378:HG2_Ill_breakscan11_1498;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7378:HG2_10X_allpass_1730:HG2_Ill_GATKHCSBGrefine_7058:HG2_Ill_SVrefine2DISCOVARplusDovetail_13611:HG2_Ill_manta_2959:HG2_Ill_scalpel_9905:HG2_PB_SVrefine2Falcon1plusDovetail_12411:HG2_PB_SVrefine2Falcon2Bionano_4896:HG2_PB_SVrefine2PB10Xhap12_7565:HG2_PB_SVrefine2PBcRplusDovetail_11611:HG2_PB_pbsv_10341:HG3_10X_allpass_2095:HG3_Ill_GATKHCSBGrefine_6960:HG3_PB_SVrefine2PBcRDovetail_4793:HG4_10X_allpass_2015:HG4_Ill_GATKHCSBGrefine_7188:HG4_Ill_MetaSV_5617:HG4_PB_SVrefine2Falcon1Dovetail_6346:HG4_PB_SVrefine2PBcRDovetail_5192:HG4_PB_pbsv_10372;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0120482;ClusterMaxSizeDiff=0.0120482;ClusterMaxEditDist=0.0151057;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=48485;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=9:84477073-84477422;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:1:21:0:23:./.:0:0:0:0:1/1:0:27:./.:1:12:.:.:.
chr9	84478772	HG2_PB_SVrefine2PBcRplusDovetail_11612	TTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5384:HG4_PB_HySA_15192:HG4_Ill_scalpel_9635:HG4_Ill_SVrefine2DISCOVARDovetail_7484:HG4_Ill_MetaSV_5620:HG3_PB_pbsv_10090:HG3_PB_SVrefine2PBcRDovetail_4794:HG2_PB_pbsv_10342:HG2_PB_SVrefine2Falcon2Bionano_4897:HG2_Ill_scalpel_9906:HG2_Ill_SVrefine2DISCOVARplusDovetail_13612:HG2_Ill_GATKHCSBGrefine_7059:HG4_PB_pbsv_10373:HG4_PB_SVrefine2PBcRDovetail_5193:HG4_PB_SVrefine2Falcon1Dovetail_6347:HG4_Ill_MetaSV_5619:HG3_PB_HySA_15659:HG3_Ill_MetaSV_5564:HG2_PB_SVrefine2PBcRplusDovetail_11612:HG2_PB_SVrefine2PB10Xhap12_7566:HG2_PB_SVrefine2Falcon1plusDovetail_12412:HG2_PB_HySA_18777:HG2_10X_SVrefine210Xhap12_7379:HG2_Ill_tnscope_1183:HG3_PB_SVrefine2Falcon1Dovetail_6251;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7379:HG2_PB_HySA_18777:HG2_PB_SVrefine2Falcon1plusDovetail_12412:HG2_PB_SVrefine2PB10Xhap12_7566:HG2_PB_SVrefine2PBcRplusDovetail_11612:HG3_Ill_MetaSV_5564:HG3_PB_HySA_15659:HG4_Ill_MetaSV_5619:HG4_PB_SVrefine2Falcon1Dovetail_6347:HG4_PB_SVrefine2PBcRDovetail_5193:HG4_PB_pbsv_10373;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0466667;ClusterMaxSizeDiff=0.0466667;ClusterMaxEditDist=0.0466667;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-304;DistBack=-810;DistForward=2410;DistMin=-810;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=303;REFWIDENED=9:84478773-84479379;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=0.9967;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=4201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:47:1/1:1:19:1:24:./.:0:0:0:0:1/1:0:13:./.:1:4:.:.:.
chr9	85125342	HG4_Ill_scalpel_9638	ATATATTATATATATATTATATATATATATTTTATATATATATTATATATATATATTTTATATATATATATTATATATATATATTTTAT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_10375:HG4_Ill_GATKHC_16802:HG4_Ill_GATKHCSBGrefine_7191:HG4_PB_HySA_15194:HG4_Ill_scalpel_9639:HG4_Ill_Krunchall_14574:HG4_Ill_250bpfermikitraw_13892:HG4_Ill_150bpfermikitraw_13294:HG4_10X_allpass_2017:HG4_Ill_GATKHC_16801:HG4_Ill_GATKHCSBGrefine_7190:HG2_Ill_GATKHC_16789:HG2_Ill_GATKHCSBGrefine_7061:HG4_Ill_svaba_13063:HG4_Ill_scalpel_9638:HG4_Ill_250bpfermikitraw_13891:HG2_Ill_svaba_12987:HG2_Ill_manta_2961:HG2_Ill_SpiralSDKrefine_17916:HG2_Ill_250bpfermikitraw_14005:HG2_Ill_150bpfermikitraw_13148:HG2_10X_allpass_1732:HG2_PB_pbsv_10344:HG4_PB_assemblyticsfalcon_27242;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_1732:HG2_Ill_150bpfermikitraw_13148:HG2_Ill_250bpfermikitraw_14005:HG2_Ill_SpiralSDKrefine_17916:HG2_Ill_manta_2961:HG2_Ill_svaba_12987:HG4_Ill_250bpfermikitraw_13891:HG4_Ill_scalpel_9638:HG4_Ill_svaba_13063;NumExactMatchSVs=9;ClusterMaxShiftDist=0.26087;ClusterMaxSizeDiff=0.26087;ClusterMaxEditDist=0.26087;PBcalls=4;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=15;NumTechs=3;NumTechsExact=2;SVLEN=-88;DistBack=22737;DistForward=-85;DistMin=-85;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=72;REFWIDENED=9:85125306-85125465;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4202.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:16:0|1:31:5:3:14:./.:0:0:0:0:0/1:23:13:./.:.:.:.:.:.
chr9	85846104	HG4_Ill_svaba_13065	AGAAGATAGGGCACATGCCTTTCTCTTGTCCTTGGAGCTATTTATGGAGCTCCCCCTGGAG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_734:HG2_PB_HySA_18789:HG2_PB_assemblyticsfalcon_27825:HG3_Ill_Spiral_10961:HG4_PB_HySA_15195:HG4_PB_pbsv_10377:HG3_PB_pbsv_10094:HG2_PB_pbsv_10348:HG4_PB_assemblyticsfalcon_27246:HG4_Ill_svaba_13065:HG4_Ill_scalpel_9641:HG4_Ill_manta_2525:HG4_Ill_Krunchall_14578:HG4_Ill_GATKHCSBGrefine_7193:HG4_Ill_250bpfermikitraw_13896:HG4_Ill_150bpfermikitraw_13298:HG3_PB_assemblyticsfalcon_27741:HG3_Ill_svaba_13150:HG3_Ill_scalpel_10039:HG3_Ill_Krunchall_14047:HG3_Ill_GATKHCSBGrefine_6963:HG3_Ill_250bpfermikitraw_13623:HG3_Ill_150bpfermikitraw_13195:HG2_PB_assemblyticsPBcR_27076:HG2_Ill_svaba_12990:HG2_Ill_scalpel_9913:HG2_Ill_manta_2963:HG2_Ill_SpiralSDKrefine_17919:HG2_Ill_Krunchall_14322:HG2_Ill_GATKHCSBGrefine_7064:HG2_Ill_250bpfermikitraw_14009:HG2_Ill_150bpfermikitraw_13151:HG4_Ill_Spiral_860;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13151:HG2_Ill_250bpfermikitraw_14009:HG2_Ill_GATKHCSBGrefine_7064:HG2_Ill_Krunchall_14322:HG2_Ill_SpiralSDKrefine_17919:HG2_Ill_manta_2963:HG2_Ill_scalpel_9913:HG2_Ill_svaba_12990:HG2_PB_assemblyticsPBcR_27076:HG3_Ill_150bpfermikitraw_13195:HG3_Ill_250bpfermikitraw_13623:HG3_Ill_GATKHCSBGrefine_6963:HG3_Ill_Krunchall_14047:HG3_Ill_scalpel_10039:HG3_Ill_svaba_13150:HG3_PB_assemblyticsfalcon_27741:HG4_Ill_150bpfermikitraw_13298:HG4_Ill_250bpfermikitraw_13896:HG4_Ill_GATKHCSBGrefine_7193:HG4_Ill_Krunchall_14578:HG4_Ill_manta_2525:HG4_Ill_scalpel_9641:HG4_Ill_svaba_13065:HG4_PB_assemblyticsfalcon_27246;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.0655738;PBcalls=9;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=10838;DistForward=16628;DistMin=10838;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=63;REFWIDENED=9:85846105-85846227;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4203.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:1/1:1:24:0:19:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr9	87901405	HG2_Ill_GATKHCSBGrefine_7066	TTACATGTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1500:HG3_Ill_Krunchall_14063:HG3_Ill_Spiral_10970:HG2_Ill_Spiral_735:HG3_PB_pbsv_10099:HG2_PB_pbsv_10353:HG4_PB_SVrefine2Falcon1Dovetail_6352:HG3_PB_assemblyticsfalcon_27751:HG3_PB_SVrefine2Falcon1Dovetail_6259:HG3_Ill_scalpel_10048:HG3_Ill_manta_2426:HG3_Ill_GATKHCSBGrefine_6966:HG3_10X_allpass_2096:HG2_PB_SVrefine2Falcon1plusDovetail_12420:HG2_Ill_scalpel_9921:HG2_Ill_manta_2964:HG2_Ill_GATKHCSBGrefine_7066:HG2_10X_allpass_1734:HG3_Ill_MetaSV_5566;NumClusterSVs=19;ExactMatchIDs=HG2_10X_allpass_1734:HG2_Ill_GATKHCSBGrefine_7066:HG2_Ill_manta_2964:HG2_Ill_scalpel_9921:HG2_PB_SVrefine2Falcon1plusDovetail_12420:HG3_10X_allpass_2096:HG3_Ill_GATKHCSBGrefine_6966:HG3_Ill_manta_2426:HG3_Ill_scalpel_10048:HG3_PB_SVrefine2Falcon1Dovetail_6259:HG3_PB_assemblyticsfalcon_27751:HG4_PB_SVrefine2Falcon1Dovetail_6352;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00649351;ClusterMaxSizeDiff=0.00649351;ClusterMaxEditDist=0.00651466;PBcalls=6;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=114593;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=9:87901406-87901723;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4204.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:23:0|1:41:0:0:22:./.:0:0:0:0:0/1:26:21:0/1:25:9:.:.:.
chr9	89208205	HG4_PB_SVrefine2Falcon1Dovetail_6357	TATACATATATACATATATATACACATATATACACATATATATACATATATATACATATATATACATATATACATATATATATACACATATATATATACACATATATACATATATATACATATATATATACATATATATATATACAC	T	10	PASS	ClusterIDs=HG2_PB_pbsv_10361:HG4_PB_pbsv_10389:HG3_PB_assemblyticsfalcon_27764:HG4_PB_assemblyticsfalcon_27269:HG4_PB_SVrefine2Falcon1Dovetail_6357:HG3_PB_SVrefine2Falcon1Dovetail_6265:HG2_PB_SVrefine2Falcon2Bionano_4906;NumClusterSVs=7;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_6357:HG4_PB_assemblyticsfalcon_27269;NumExactMatchSVs=2;ClusterMaxShiftDist=0.207407;ClusterMaxSizeDiff=0.207407;ClusterMaxEditDist=0.214815;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-146;DistBack=-5;DistForward=-145;DistMin=-145;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=74;REFWIDENED=9:89208150-89208369;PctSeqSimilarity=0.9223;PctSizeSimilarity=0.9041;PctRecOverlap=0.5918;SizeDiff=14;StartDistance=46;EndDistance=60;GTMatch=0;TruScore=80;MatchId=4206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:21:0|1:46:2:3:19:./.:0:0:0:0:0/1:32:5:./.:.:.:.:.:.
chr9	89799093	HG2_Ill_GATKHCSBGrefine_7090	TAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_10981:HG2_PB_HySA_18832:HG4_PB_assemblyticsfalcon_27274:HG3_PB_assemblyticsfalcon_27766:HG2_PB_assemblyticsPBcR_27107:HG2_PB_assemblyticsfalcon_27856:HG4_Ill_Krunchall_14611:HG3_Ill_Krunchall_14086:HG2_Ill_Spiral_736:HG4_Ill_MetaSV_5625:HG3_Ill_MetaSV_5570:HG2_Ill_tnscope_1185:HG2_Ill_MetaSV_5390:HG4_PB_pbsv_10392:HG4_PB_SVrefine2PBcRDovetail_5202:HG4_PB_SVrefine2Falcon1Dovetail_6360:HG4_Ill_manta_2528:HG4_Ill_SVrefine2DISCOVARDovetail_7513:HG4_Ill_GATKHCSBGrefine_7221:HG4_10X_allpass_2020:HG3_PB_pbsv_10108:HG3_PB_SVrefine2PBcRDovetail_4807:HG3_PB_SVrefine2Falcon1Dovetail_6268:HG3_Ill_manta_2428:HG3_Ill_SVrefine2DISCOVARDovetail_7739:HG3_Ill_GATKHCSBGrefine_6991:HG3_10X_allpass_2098:HG2_PB_pbsv_10364:HG2_PB_SVrefine2PBcRplusDovetail_11623:HG2_PB_SVrefine2PB10Xhap12_7584:HG2_PB_SVrefine2Falcon2Bionano_4909:HG2_PB_SVrefine2Falcon1plusDovetail_12425:HG2_Ill_manta_2966:HG2_Ill_SVrefine2DISCOVARplusDovetail_13631:HG2_Ill_GATKHCSBGrefine_7090:HG2_10X_allpass_1736:HG2_10X_SVrefine210Xhap12_7392:HG4_Ill_Spiral_862;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7392:HG2_10X_allpass_1736:HG2_Ill_GATKHCSBGrefine_7090:HG2_Ill_SVrefine2DISCOVARplusDovetail_13631:HG2_Ill_manta_2966:HG2_PB_SVrefine2Falcon1plusDovetail_12425:HG2_PB_SVrefine2Falcon2Bionano_4909:HG2_PB_SVrefine2PB10Xhap12_7584:HG2_PB_SVrefine2PBcRplusDovetail_11623:HG2_PB_pbsv_10364:HG3_10X_allpass_2098:HG3_Ill_GATKHCSBGrefine_6991:HG3_Ill_SVrefine2DISCOVARDovetail_7739:HG3_Ill_manta_2428:HG3_PB_SVrefine2Falcon1Dovetail_6268:HG3_PB_SVrefine2PBcRDovetail_4807:HG3_PB_pbsv_10108:HG4_10X_allpass_2020:HG4_Ill_GATKHCSBGrefine_7221:HG4_Ill_SVrefine2DISCOVARDovetail_7513:HG4_Ill_manta_2528:HG4_PB_SVrefine2Falcon1Dovetail_6360:HG4_PB_SVrefine2PBcRDovetail_5202:HG4_PB_pbsv_10392;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0546624;ClusterMaxSizeDiff=0.0546624;ClusterMaxEditDist=0.0546624;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=2465;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=9:89799094-89799416;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:1:29:1:33:./.:0:0:0:0:1/1:0:57:0/1:2:11:.:.:.
chr9	90858983	HG2_Ill_SVrefine2DISCOVARplusDovetail_13642	TTTATGTACCTTTTTTTTTTTTTTTTTTTTCCATTTTTTTTCTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCACAGGACAATAGTGGAGGGAAGGTCAGCAGATAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCAGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCCGTTTAACAAAGCACATCTTGCACCACCCTTAATCCATTCAACCCTGAGTGGACATAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACCTCTTTCTACACAGACATGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCCCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCGTTCTCAATGAGCTGTTGAGTACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCTCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCTCTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCCCGGGGCTGACCCCCCCCACATACTTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGCAGCTGGCCGGGCAGAGGGATGACCCCCCCACCTCCCTTCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACCTCCCTCCCAGACGGGGTGGCTGCCAGGCGGAGAGGCTCCTCACTTCCCAGACGGAGTGGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGAGGGTGTGGCTGCCGGGCAGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACATCCCAGACGGGGCGGCAGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGTGGCCTGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGAGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGCGGGGCCAAGGCAGGCAGCTGGGAAGTGGAGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGCGACTCCGTCTGCCATCCCGGCACCTTGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAAAAATACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTTGGCTCGGCATCAGGGGGAGACCGTGGAAAGAGAGGGAGAGGGAGACCGTGGGGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGAGGGAGAGGGAGAGGAGG	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5398:HG3_PB_assemblyticsfalcon_27778:HG2_PB_assemblyticsfalcon_27876:HG2_PB_assemblyticsPBcR_27123:HG4_PB_assemblyticsfalcon_27287:HG3_Ill_Krunchall_14098:HG2_Ill_Krunchall_14369:HG4_PB_pbsv_10404:HG4_PB_SVrefine2PBcRDovetail_5212:HG4_PB_SVrefine2Falcon1Dovetail_6368:HG4_Ill_SVrefine2DISCOVARDovetail_7521:HG4_Ill_MetaSV_5631:HG4_Ill_GATKHCSBGrefine_7226:HG4_10X_allpass_2022:HG3_PB_pbsv_10118:HG3_PB_SVrefine2PBcRDovetail_4817:HG3_PB_SVrefine2Falcon1Dovetail_6276:HG3_Ill_SVrefine2DISCOVARDovetail_7746:HG3_Ill_MetaSV_5578:HG3_Ill_GATKHCSBGrefine_6999:HG3_10X_allpass_2100:HG2_PB_pbsv_10379:HG2_PB_SVrefine2PBcRplusDovetail_11635:HG2_PB_SVrefine2PB10Xhap12_7598:HG2_PB_SVrefine2Falcon2Bionano_4917:HG2_PB_SVrefine2Falcon1plusDovetail_12437:HG2_Ill_SVrefine2DISCOVARplusDovetail_13642:HG2_Ill_MetaSV_5399:HG2_Ill_GATKHCSBGrefine_7097:HG2_10X_allpass_1739:HG2_10X_SVrefine210Xhap12_7397:HG2_Ill_breakscan11_1505;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7397:HG2_10X_allpass_1739:HG2_Ill_GATKHCSBGrefine_7097:HG2_Ill_MetaSV_5399:HG2_Ill_SVrefine2DISCOVARplusDovetail_13642:HG2_PB_SVrefine2Falcon1plusDovetail_12437:HG2_PB_SVrefine2Falcon2Bionano_4917:HG2_PB_SVrefine2PB10Xhap12_7598:HG2_PB_SVrefine2PBcRplusDovetail_11635:HG2_PB_pbsv_10379:HG3_10X_allpass_2100:HG3_Ill_GATKHCSBGrefine_6999:HG3_Ill_MetaSV_5578:HG3_Ill_SVrefine2DISCOVARDovetail_7746:HG3_PB_SVrefine2Falcon1Dovetail_6276:HG3_PB_SVrefine2PBcRDovetail_4817:HG3_PB_pbsv_10118:HG4_10X_allpass_2022:HG4_Ill_GATKHCSBGrefine_7226:HG4_Ill_MetaSV_5631:HG4_Ill_SVrefine2DISCOVARDovetail_7521:HG4_PB_SVrefine2Falcon1Dovetail_6368:HG4_PB_SVrefine2PBcRDovetail_5212:HG4_PB_pbsv_10404;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0126646;ClusterMaxSizeDiff=0.0126646;ClusterMaxEditDist=0.0126646;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1980;DistBack=14532;DistForward=11536;DistMin=11536;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=9:90858984-90860976;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4208.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:74:1/1:0:27:1:27:./.:0:0:0:0:1/1:0:31:1/1:4:128:1939:.:.
chr9	91501994	HG3_Ill_250bpfermikitraw_13670	GTGGCTGCTGTGGGGGGTGGGGGTGAGATTCCCAGGTCACTGCAGTTGTGTACCTAGGAGGATTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7400:HG4_PB_pbsv_10411:HG3_PB_assemblyticsfalcon_27786:HG2_PB_assemblyticsfalcon_27882:HG2_PB_assemblyticsPBcR_27129:HG4_PB_assemblyticsfalcon_27294:HG4_PB_SVrefine2PBcRDovetail_5218:HG4_PB_HySA_15245:HG2_PB_HySA_18859:HG2_PB_HySA_18858:HG2_PB_HySA_18857:HG4_PB_SVrefine2Falcon1Dovetail_6374:HG4_Ill_svaba_13112:HG4_Ill_scalpel_9671:HG4_Ill_SVrefine2DISCOVARDovetail_7524:HG4_Ill_Krunchall_14626:HG4_Ill_GATKHC_16860:HG4_Ill_GATKHCSBGrefine_7229:HG4_Ill_250bpfermikitraw_13940:HG4_Ill_150bpfermikitraw_13344:HG4_CG_vcfBeta_6670:HG4_10X_allpass_2023:HG3_PB_pbsv_10124:HG3_PB_SVrefine2Falcon1Dovetail_6282:HG3_Ill_svaba_13196:HG3_Ill_scalpel_10069:HG3_Ill_SVrefine2DISCOVARDovetail_7750:HG3_Ill_Krunchall_14103:HG3_Ill_GATKHC_16777:HG3_Ill_GATKHCSBGrefine_7002:HG3_Ill_250bpfermikitraw_13670:HG3_Ill_150bpfermikitraw_13240:HG3_CG_vcfBeta_5640:HG3_10X_allpass_2101:HG2_PB_pbsv_10385:HG2_PB_SVrefine2PBcRplusDovetail_11638:HG2_PB_SVrefine2PB10Xhap12_7601:HG2_PB_SVrefine2Falcon2Bionano_4920:HG2_PB_SVrefine2Falcon1plusDovetail_12444:HG2_Ill_svaba_13038:HG2_Ill_scalpel_9947:HG2_Ill_manta_2972:HG2_Ill_SpiralSDKrefine_17959:HG2_Ill_SVrefine2DISCOVARplusDovetail_13645:HG2_Ill_Krunchall_14373:HG2_Ill_GATKHC_16844:HG2_Ill_GATKHCSBGrefine_7100:HG2_Ill_250bpfermikitraw_14058:HG2_Ill_150bpfermikitraw_13196:HG2_CG_vcfBeta_5921:HG2_10X_allpass_1740;NumClusterSVs=51;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7400:HG4_PB_SVrefine2PBcRDovetail_5218:HG4_PB_SVrefine2Falcon1Dovetail_6374:HG4_Ill_svaba_13112:HG4_Ill_scalpel_9671:HG4_Ill_SVrefine2DISCOVARDovetail_7524:HG4_Ill_Krunchall_14626:HG4_Ill_GATKHC_16860:HG4_Ill_GATKHCSBGrefine_7229:HG4_Ill_250bpfermikitraw_13940:HG4_Ill_150bpfermikitraw_13344:HG4_CG_vcfBeta_6670:HG4_10X_allpass_2023:HG3_PB_pbsv_10124:HG3_PB_SVrefine2Falcon1Dovetail_6282:HG3_Ill_svaba_13196:HG3_Ill_scalpel_10069:HG3_Ill_SVrefine2DISCOVARDovetail_7750:HG3_Ill_Krunchall_14103:HG3_Ill_GATKHC_16777:HG3_Ill_GATKHCSBGrefine_7002:HG3_Ill_250bpfermikitraw_13670:HG3_Ill_150bpfermikitraw_13240:HG3_CG_vcfBeta_5640:HG3_10X_allpass_2101:HG2_PB_pbsv_10385:HG2_PB_SVrefine2PBcRplusDovetail_11638:HG2_PB_SVrefine2PB10Xhap12_7601:HG2_PB_SVrefine2Falcon2Bionano_4920:HG2_PB_SVrefine2Falcon1plusDovetail_12444:HG2_Ill_svaba_13038:HG2_Ill_scalpel_9947:HG2_Ill_manta_2972:HG2_Ill_SpiralSDKrefine_17959:HG2_Ill_SVrefine2DISCOVARplusDovetail_13645:HG2_Ill_Krunchall_14373:HG2_Ill_GATKHC_16844:HG2_Ill_GATKHCSBGrefine_7100:HG2_Ill_250bpfermikitraw_14058:HG2_Ill_150bpfermikitraw_13196:HG2_CG_vcfBeta_5921:HG2_10X_allpass_1740;NumExactMatchSVs=42;ClusterMaxShiftDist=0.209677;ClusterMaxSizeDiff=0.209677;ClusterMaxEditDist=0.209677;PBcalls=18;Illcalls=26;TenXcalls=4;CGcalls=3;PBexactcalls=9;Illexactcalls=26;TenXexactcalls=4;CGexactcalls=3;HG2count=23;HG3count=13;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-64;DistBack=37015;DistForward=11093;DistMin=11093;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=9:91501995-91502065;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4209.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:74:1/1:2:37:3:30:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr9	91574284	HG3_Ill_GATKHC_16778	CGGGCGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCACCTCCTTCCCGGACGAGGCGGCTGGCT	C	20	PASS	ClusterIDs=HG2_PB_HySA_18860:HG4_PB_assemblyticsfalcon_27295:HG3_PB_assemblyticsfalcon_27787:HG2_PB_assemblyticsfalcon_27883:HG2_PB_assemblyticsPBcR_27130:HG4_PB_pbsv_10412:HG4_PB_SVrefine2PBcRDovetail_5219:HG4_PB_SVrefine2Falcon1Dovetail_6375:HG4_Ill_GATKHCSBGrefine_7230:HG4_Ill_250bpfermikitraw_13941:HG4_Ill_150bpfermikitraw_13345:HG3_PB_pbsv_10125:HG3_PB_SVrefine2PBcRDovetail_4821:HG3_PB_SVrefine2Falcon1Dovetail_6283:HG3_Ill_GATKHC_16778:HG3_Ill_GATKHCSBGrefine_7003:HG3_Ill_250bpfermikitraw_13671:HG2_PB_pbsv_10386:HG2_PB_SVrefine2PBcRplusDovetail_11639:HG2_PB_SVrefine2PB10Xhap12_7602:HG2_PB_SVrefine2Falcon2Bionano_4921:HG2_PB_SVrefine2Falcon1plusDovetail_12445:HG2_Ill_Krunchall_14374:HG2_Ill_GATKHC_16845:HG2_Ill_GATKHCSBGrefine_7101:HG2_Ill_250bpfermikitraw_14059:HG2_Ill_150bpfermikitraw_13197:HG2_10X_SVrefine210Xhap12_7401;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7401:HG2_Ill_150bpfermikitraw_13197:HG2_Ill_250bpfermikitraw_14059:HG2_Ill_GATKHCSBGrefine_7101:HG2_Ill_GATKHC_16845:HG2_Ill_Krunchall_14374:HG2_PB_SVrefine2Falcon1plusDovetail_12445:HG2_PB_SVrefine2Falcon2Bionano_4921:HG2_PB_SVrefine2PB10Xhap12_7602:HG2_PB_SVrefine2PBcRplusDovetail_11639:HG2_PB_pbsv_10386:HG3_Ill_250bpfermikitraw_13671:HG3_Ill_GATKHCSBGrefine_7003:HG3_Ill_GATKHC_16778:HG3_PB_SVrefine2Falcon1Dovetail_6283:HG3_PB_SVrefine2PBcRDovetail_4821:HG3_PB_pbsv_10125:HG4_Ill_150bpfermikitraw_13345:HG4_Ill_250bpfermikitraw_13941:HG4_Ill_GATKHCSBGrefine_7230:HG4_PB_SVrefine2Falcon1Dovetail_6375:HG4_PB_SVrefine2PBcRDovetail_5219:HG4_PB_pbsv_10412;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0196078;ClusterMaxSizeDiff=0.0196078;ClusterMaxEditDist=0.0780488;PBcalls=16;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=11;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-100;DistBack=10930;DistForward=14941;DistMin=10930;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=90;REFWIDENED=9:91574208-91574397;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:72:1/1:4:22:1:32:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr9	92038667	HG2_Ill_svaba_13042	ACCTCAGCACCTCCCCTCCCTCAGCTACTCCCTCAGTGCCTCCCCTCCCTCCACTAATC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_10418:HG2_PB_pbsv_10392:HG2_PB_assemblyticsfalcon_27891:HG2_Ill_breakscan11_1507:HG4_PB_HySA_15251:HG4_Ill_svaba_13115:HG4_Ill_GATKHC_16861:HG4_Ill_GATKHCSBGrefine_7233:HG4_Ill_150bpfermikitraw_13347:HG2_PB_assemblyticsPBcR_27137:HG2_Ill_svaba_13042:HG2_Ill_scalpel_9949:HG2_Ill_GATKHC_16847:HG2_Ill_GATKHCSBGrefine_7103:HG2_Ill_150bpfermikitraw_13199;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13199:HG2_Ill_GATKHCSBGrefine_7103:HG2_Ill_GATKHC_16847:HG2_Ill_scalpel_9949:HG2_Ill_svaba_13042:HG2_PB_assemblyticsPBcR_27137:HG4_Ill_150bpfermikitraw_13347:HG4_Ill_GATKHCSBGrefine_7233:HG4_Ill_GATKHC_16861:HG4_Ill_svaba_13115:HG4_PB_HySA_15251;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.0517241;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=17539;DistForward=-32;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=416;REFWIDENED=9:92038610-92039083;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:39:1|0:10:37:12:0:./.:0:0:0:0:0/1:7:3:./.:.:.:.:.:.
chr9	92701143	HG3_Ill_scalpel_10072	GCTCGAGGAAACTTCTTGTTTTCAGTTTGTGTTTTTTTTCATTCCTTTCTTTTTTTCACCCTGCAGTTCAGAACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7405:HG2_PB_HySA_18869:HG3_PB_pbsv_10132:HG3_Ill_svaba_13201:HG3_Ill_scalpel_10072:HG3_Ill_manta_2433:HG3_Ill_Krunchall_14107:HG3_Ill_GATKHC_16782:HG3_Ill_GATKHCSBGrefine_7006:HG3_Ill_Cortex_3873:HG3_Ill_250bpfermikitraw_13677:HG3_Ill_150bpfermikitraw_13246:HG2_Ill_svaba_13045:HG2_Ill_manta_2974:HG2_Ill_SpiralSDKrefine_17964:HG2_Ill_Krunchall_14380:HG2_Ill_GATKHC_16850:HG2_Ill_GATKHCSBGrefine_7104:HG2_Ill_Cortex_9357:HG2_Ill_250bpfermikitraw_14064:HG2_Ill_150bpfermikitraw_13202:HG2_PB_pbsv_10395:HG3_Ill_SVrefine2DISCOVARDovetail_7755:HG2_PB_SVrefine2Falcon1plusDovetail_12454;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13202:HG2_Ill_250bpfermikitraw_14064:HG2_Ill_Cortex_9357:HG2_Ill_GATKHCSBGrefine_7104:HG2_Ill_GATKHC_16850:HG2_Ill_Krunchall_14380:HG2_Ill_SpiralSDKrefine_17964:HG2_Ill_manta_2974:HG2_Ill_svaba_13045:HG3_Ill_150bpfermikitraw_13246:HG3_Ill_250bpfermikitraw_13677:HG3_Ill_Cortex_3873:HG3_Ill_GATKHCSBGrefine_7006:HG3_Ill_GATKHC_16782:HG3_Ill_Krunchall_14107:HG3_Ill_manta_2433:HG3_Ill_scalpel_10072:HG3_Ill_svaba_13201;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0402685;ClusterMaxSizeDiff=0.0402685;ClusterMaxEditDist=0.0805369;PBcalls=4;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-74;DistBack=236676;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=73;REFWIDENED=9:92701107-92701253;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:34:0|1:34:6:0:28:./.:0:0:0:0:0/1:27:19:./.:.:.:.:.:.
chr9	93665477	HG2_Ill_250bpfermikitraw_14076	GAGCCCGGTAATGAGGCTCTCAATTCTGTCCCTGTTCAGCCCTGCTGTAGGGCCCTCAAACTTCCACCTGTTC	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_737:HG4_PB_HySA_15263:HG2_Ill_breakscan11_1508:HG4_PB_pbsv_10427:HG4_Ill_Spiral_865:HG2_PB_pbsv_10400:HG4_Ill_svaba_13127:HG4_Ill_manta_2530:HG4_Ill_Krunchall_14639:HG4_Ill_GATKHC_16876:HG4_Ill_GATKHCSBGrefine_7247:HG4_Ill_250bpfermikitraw_13959:HG4_Ill_150bpfermikitraw_13363:HG2_PB_assemblyticsPBcR_27150:HG2_Ill_svaba_13053:HG2_Ill_manta_2976:HG2_Ill_SpiralSDKrefine_17970:HG2_Ill_Krunchall_14388:HG2_Ill_GATKHC_16858:HG2_Ill_GATKHCSBGrefine_7111:HG2_Ill_250bpfermikitraw_14076:HG2_PB_HySA_18885;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14076:HG2_Ill_GATKHCSBGrefine_7111:HG2_Ill_GATKHC_16858:HG2_Ill_Krunchall_14388:HG2_Ill_SpiralSDKrefine_17970:HG2_Ill_manta_2976:HG2_Ill_svaba_13053:HG2_PB_assemblyticsPBcR_27150:HG4_Ill_150bpfermikitraw_13363:HG4_Ill_250bpfermikitraw_13959:HG4_Ill_GATKHCSBGrefine_7247:HG4_Ill_GATKHC_16876:HG4_Ill_Krunchall_14639:HG4_Ill_manta_2530:HG4_Ill_svaba_13127;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0277778;PBcalls=5;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-72;DistBack=18276;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=112;REFWIDENED=9:93665478-93665661;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4213.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:38:./.:30:8:11:24:./.:0:0:0:0:0/1:32:32:./.:.:.:.:.:.
chr9	93883362	HG2_PB_SVrefine2PB10Xhap12_7612	GGGAATATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTGTCGCCCAGGCTGGACTGCAGTGGCGCAATCTCGGCTCACTGCAGTCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5405:HG2_10X_allpass_1741:HG3_Ill_Krunchall_14120:HG2_Ill_Krunchall_14391:HG2_PB_assemblyticsPBcR_27152:HG4_PB_assemblyticsfalcon_27314:HG4_PB_SVrefine2Falcon1Dovetail_6386:HG2_Ill_breakscan11_1509:HG3_PB_pbsv_10141:HG3_PB_SVrefine2PBcRDovetail_4830:HG3_PB_SVrefine2Falcon1Dovetail_6293:HG3_Ill_scalpel_10076:HG3_Ill_manta_2436:HG3_Ill_SVrefine2DISCOVARDovetail_7760:HG3_Ill_GATKHCSBGrefine_7017:HG3_10X_allpass_2102:HG2_PB_pbsv_10401:HG2_PB_SVrefine2PBcRplusDovetail_11650:HG2_PB_SVrefine2PB10Xhap12_7612:HG2_Ill_scalpel_9955:HG2_Ill_manta_2977:HG2_Ill_SVrefine2DISCOVARplusDovetail_13656:HG2_Ill_GATKHCSBGrefine_7112:HG2_10X_SVrefine210Xhap12_7411:HG3_Ill_MetaSV_5585:HG2_Ill_tnscope_1187;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7411:HG2_Ill_GATKHCSBGrefine_7112:HG2_Ill_SVrefine2DISCOVARplusDovetail_13656:HG2_Ill_manta_2977:HG2_Ill_scalpel_9955:HG2_PB_SVrefine2PB10Xhap12_7612:HG2_PB_SVrefine2PBcRplusDovetail_11650:HG2_PB_pbsv_10401:HG3_10X_allpass_2102:HG3_Ill_GATKHCSBGrefine_7017:HG3_Ill_SVrefine2DISCOVARDovetail_7760:HG3_Ill_manta_2436:HG3_Ill_scalpel_10076:HG3_PB_SVrefine2Falcon1Dovetail_6293:HG3_PB_SVrefine2PBcRDovetail_4830:HG3_PB_pbsv_10141;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0736;ClusterMaxSizeDiff=0.0736;ClusterMaxEditDist=0.0736;PBcalls=9;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=81570;DistForward=11210;DistMin=11210;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=9:93883363-93883696;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:31:1:2:34:./.:0:0:0:0:0/1:25:29:0/1:27:4:.:.:.
chr9	96470354	HG2_Ill_GATKHCSBGrefine_7120	GCAAACCATGACTGCAGGGGGAAGAAGGAGATGGAACTTATTAAGCACCTACTGTGTGCCAAACACCTATATCCAGCTCTGGTTACAGGTGTTGGGTGTTCCGCATACAGTAGGTGCTGAAGAGGGTGGCCAGCTGGGTAATGGGAACAGAACAGAGCCTGGGATATAGGGTACAGGGCTTATTATTGGTGTTATCACTTCATGTCTCCCAGAGAGGCCTCTGTGGGTCACTGCCCCCCTCAATGAGTTCTGAAGAGAGAAAACAGAGGCCGTGGTCCAGTCAGTATGGGGAGCACTGTGTTCCCGACACCCCACTGCGTGTTAAGGTCAGGCGCCACATCTTGTAGTCAGTTGCTTTGCCGAGTGGCTCCAGCTTTCTCTAGCTCCTCTCTGGGCCTCAGTTTCCCTGCCTGCTGGCCAACAGAGGGCCCTGCCAACTCTGGCTGCCTATGACCAGGGTGGCTCCAGAGGGTGCTGCTGGGAGGGGTGCCAACCCTACCTCTCTGCAAGTGAAACTGGGCATGCCACTCACCTCTCTGGGCCTCAGTTTCCTCTTCTGAGCATTGAGGAAATTTGGGGGTTTCCATGTTCCTTCCAGTCAGAAACCAGATGCTGCCATGTCCCCCAACCCAAGGCCTCAGGAACAGTGCTGGATGGTCATTTTTGAGGTTTTCTGTCTCTGTCTCTCCGAGTGAGGTTTGCTGGGAAAGCTAAGAATAGAATCCAGCCAGGCTGTAGTGGCGGCCAGCTGGAACCTGATATAGTCACATATGAGAACTGGTAGGCCTGCATGCCGACCCTCTATGGACCAGAATGGGACAGAGGCCAGAATATGGCCATGCTCTTCATCCTCACTCCTGCCCCACTGCCCTCAGCCCAGTCCTCCTGCTCCATCTGATTGAAAATCAGGGCATGTAGGGTGATGGTTTGGGCTGCAGCCAGGTCTGTGCCTGCTGTGGCCTCTGAGCTCTGGAGTCAAATGGGGATTGTGGAAGAGGCTGCCTAGAGTGGCAGAAACCCTACCCTGGAATGGGGAGCTGGCTCAGCTGCGGGCTCACTGTGTGAGCCTCAGCAACTTGCCATCCCTCTCTGGTTTCAGTTAGTGGCATCA	G	20	PASS	ClusterIDs=HG2_10X_allpass_1742:HG2_Ill_Krunchall_14409:HG2_Ill_tnscope_1188:HG2_Ill_MetaSV_5408:HG4_PB_pbsv_10442:HG4_PB_assemblyticsfalcon_27337:HG4_PB_SVrefine2PBcRDovetail_5237:HG4_PB_SVrefine2Falcon1Dovetail_6396:HG4_Ill_SVrefine2DISCOVARDovetail_7549:HG4_Ill_MetaSV_5642:HG4_Ill_GATKHCSBGrefine_7257:HG4_10X_allpass_2025:HG3_PB_assemblyticsfalcon_27826:HG3_PB_SVrefine2Falcon1Dovetail_6303:HG2_PB_pbsv_10415:HG2_PB_assemblyticsfalcon_27928:HG2_PB_assemblyticsPBcR_27171:HG2_PB_SVrefine2PBcRplusDovetail_11659:HG2_PB_SVrefine2PB10Xhap12_7623:HG2_PB_SVrefine2Falcon1plusDovetail_12465:HG2_Ill_GATKHCSBGrefine_7120:HG2_10X_SVrefine210Xhap12_7418:HG2_Ill_Krunchall_14408:HG4_Ill_Krunchall_14662;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7418:HG2_Ill_GATKHCSBGrefine_7120:HG2_PB_SVrefine2Falcon1plusDovetail_12465:HG2_PB_SVrefine2PB10Xhap12_7623:HG2_PB_SVrefine2PBcRplusDovetail_11659:HG2_PB_assemblyticsPBcR_27171:HG2_PB_assemblyticsfalcon_27928:HG2_PB_pbsv_10415:HG3_PB_SVrefine2Falcon1Dovetail_6303:HG3_PB_assemblyticsfalcon_27826:HG4_10X_allpass_2025:HG4_Ill_GATKHCSBGrefine_7257:HG4_Ill_MetaSV_5642:HG4_Ill_SVrefine2DISCOVARDovetail_7549:HG4_PB_SVrefine2Falcon1Dovetail_6396:HG4_PB_SVrefine2PBcRDovetail_5237:HG4_PB_assemblyticsfalcon_27337:HG4_PB_pbsv_10442;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00903342;ClusterMaxSizeDiff=0.00903342;ClusterMaxEditDist=0.00903342;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=12;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1110;DistBack=35658;DistForward=-1110;DistMin=-1110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:96470355-96471465;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4215.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:36:0|1:27:5:0:22:./.:0:0:0:0:0/1:53:9:0/1:89:37:.:.:.
chr9	96730345	HG2_10X_SVrefine210Xhap12_7419	TCCAGATCACTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7629:HG2_PB_assemblyticsPBcR_27174:HG2_PB_SVrefine2PBcRplusDovetail_11661:HG3_PB_HySA_15766:HG3_Ill_Krunchall_14141:HG2_Ill_Krunchall_14414:HG3_PB_pbsv_10162:HG2_Ill_tnscope_1189:HG2_Ill_MetaSV_5409:HG3_PB_SVrefine2PBcRDovetail_4839:HG3_Ill_scalpel_10098:HG3_Ill_manta_2441:HG3_Ill_GATKHCSBGrefine_7030:HG3_10X_allpass_2103:HG2_PB_pbsv_10419:HG2_PB_assemblyticsfalcon_27933:HG2_PB_SVrefine2PB10Xhap12_7630:HG2_PB_SVrefine2Falcon2Bionano_4940:HG2_PB_SVrefine2Falcon1plusDovetail_12469:HG2_Ill_scalpel_9972:HG2_Ill_GATKHCSBGrefine_7125:HG2_10X_allpass_1743:HG2_10X_SVrefine210Xhap12_7419:HG2_Ill_breakscan11_1512;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7419:HG2_10X_allpass_1743:HG2_Ill_GATKHCSBGrefine_7125:HG2_Ill_scalpel_9972:HG2_PB_SVrefine2Falcon1plusDovetail_12469:HG2_PB_SVrefine2Falcon2Bionano_4940:HG2_PB_SVrefine2PB10Xhap12_7630:HG2_PB_assemblyticsfalcon_27933:HG2_PB_pbsv_10419:HG3_10X_allpass_2103:HG3_Ill_GATKHCSBGrefine_7030:HG3_Ill_manta_2441:HG3_Ill_scalpel_10098:HG3_PB_SVrefine2PBcRDovetail_4839;NumExactMatchSVs=14;ClusterMaxShiftDist=0.05;ClusterMaxSizeDiff=0.05;ClusterMaxEditDist=0.0767754;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-252;DistBack=28281;DistForward=37980;DistMin=28281;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=9:96730346-96730610;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:0|1:21:2:1:26:./.:0:0:0:0:0/1:35:20:./.:.:.:.:.:.
chr9	97292906	HG2_PB_SVrefine2PB10Xhap12_7633	ACCAAACACCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11664:HG4_Ill_GATKHCSBGrefine_7264:HG2_10X_allpass_1744:HG4_Ill_manta_2534:HG4_Ill_MetaSV_5645:HG4_10X_allpass_2028:HG4_Ill_scalpel_9698:HG3_Ill_Krunchall_14146:HG2_Ill_Krunchall_14421:HG2_PB_pbsv_10424:HG3_PB_pbsv_10166:HG4_PB_pbsv_10448:HG2_Ill_tnscope_1190:HG3_Ill_scalpel_10107:HG3_Ill_manta_2443:HG3_Ill_GATKHCSBGrefine_7037:HG3_10X_allpass_2105:HG2_PB_SVrefine2PB10Xhap12_7633:HG2_Ill_scalpel_9979:HG2_Ill_GATKHCSBGrefine_7131:HG2_10X_SVrefine210Xhap12_7423:HG2_Ill_MetaSV_5411:HG3_Ill_MetaSV_5592:HG2_PB_assemblyticsPBcR_27181;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7423:HG2_Ill_GATKHCSBGrefine_7131:HG2_Ill_scalpel_9979:HG2_PB_SVrefine2PB10Xhap12_7633:HG3_10X_allpass_2105:HG3_Ill_GATKHCSBGrefine_7037:HG3_Ill_manta_2443:HG3_Ill_scalpel_10107;NumExactMatchSVs=8;ClusterMaxShiftDist=0.176471;ClusterMaxSizeDiff=0.176471;ClusterMaxEditDist=0.176471;PBcalls=6;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=33708;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=9:97292907-97293248;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4217.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:20:0|1:24:0:1:19:./.:0:0:0:0:0/1:31:24:0/1:26:4:.:.:.
chr9	100173227	HG2_PB_SVrefine2PBcRplusDovetail_11670	CTTATCAAACTGTACATTTTAAACATTCAGTTTATTGTATGTCTTATACATGGCAGTCAAGCTGTAATAAAATACCGGTTGAATAAGCAGCAGGTTCTCAGTAAATGCATAAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7428:HG2_PB_pbsv_10434:HG4_PB_pbsv_10460:HG3_PB_pbsv_10176:HG3_Ill_250bpfermikitraw_13731:HG3_Ill_150bpfermikitraw_13294:HG2_Ill_250bpfermikitraw_14114:HG2_Ill_150bpfermikitraw_13254:HG4_PB_SVrefine2Falcon1Dovetail_6402:HG3_PB_SVrefine2PBcRDovetail_4848:HG3_PB_SVrefine2Falcon1Dovetail_6309:HG3_Ill_SVrefine2DISCOVARDovetail_7776:HG2_PB_SVrefine2PBcRplusDovetail_11670:HG2_PB_SVrefine2PB10Xhap12_7640:HG2_PB_SVrefine2Falcon2Bionano_4943:HG2_PB_SVrefine2Falcon1plusDovetail_12473:HG2_Ill_SVrefine2DISCOVARplusDovetail_13672;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7428:HG4_PB_SVrefine2Falcon1Dovetail_6402:HG3_PB_SVrefine2PBcRDovetail_4848:HG3_PB_SVrefine2Falcon1Dovetail_6309:HG3_Ill_SVrefine2DISCOVARDovetail_7776:HG2_PB_SVrefine2PBcRplusDovetail_11670:HG2_PB_SVrefine2PB10Xhap12_7640:HG2_PB_SVrefine2Falcon2Bionano_4943:HG2_PB_SVrefine2Falcon1plusDovetail_12473:HG2_Ill_SVrefine2DISCOVARplusDovetail_13672;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0272727;ClusterMaxSizeDiff=0.0269058;ClusterMaxEditDist=0.0545455;PBcalls=10;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-112;DistBack=2;DistForward=-112;DistMin=-112;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=222;REFWIDENED=9:100173228-100173561;PctSeqSimilarity=0.9865;PctSizeSimilarity=1;PctRecOverlap=0.7876;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=92;MatchId=4218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:0:20:1:15:./.:0:0:0:0:0/1:16:3:./.:.:.:.:.:.
chr9	100761058	HG4_Ill_SVrefine2DISCOVARDovetail_7565	AGAAAGTGGTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7431:HG4_PB_HySA_15313:HG4_PB_assemblyticsfalcon_27359:HG2_PB_assemblyticsfalcon_27956:HG3_PB_assemblyticsfalcon_27857:HG4_10X_allpass_2030:HG3_Ill_Krunchall_14160:HG2_Ill_Krunchall_14441:HG3_Ill_Spiral_11036:HG2_PB_HySA_18965:HG2_Ill_Spiral_739:HG3_PB_pbsv_10178:HG4_PB_pbsv_10462:HG4_Ill_MetaSV_5647:HG3_Ill_MetaSV_5594:HG2_Ill_tnscope_1191:HG4_PB_SVrefine2PBcRDovetail_5244:HG4_PB_SVrefine2Falcon1Dovetail_6403:HG4_Ill_scalpel_9708:HG4_Ill_manta_2537:HG4_Ill_SVrefine2DISCOVARDovetail_7565:HG4_Ill_GATKHCSBGrefine_7266:HG3_PB_SVrefine2PBcRDovetail_4849:HG3_PB_SVrefine2Falcon1Dovetail_6311:HG3_Ill_scalpel_10121:HG3_Ill_manta_2446:HG3_Ill_SVrefine2DISCOVARDovetail_7778:HG3_Ill_GATKHCSBGrefine_7042:HG3_10X_allpass_2108:HG2_PB_pbsv_10436:HG2_PB_SVrefine2PBcRplusDovetail_11671:HG2_PB_SVrefine2PB10Xhap12_7641:HG2_PB_SVrefine2Falcon2Bionano_4945:HG2_PB_SVrefine2Falcon1plusDovetail_12474:HG2_Ill_scalpel_9992:HG2_Ill_manta_2985:HG2_Ill_breakscan11_1513:HG2_Ill_SVrefine2DISCOVARplusDovetail_13676:HG2_Ill_MetaSV_5412:HG2_Ill_GATKHCSBGrefine_7135:HG2_10X_allpass_1745;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7431:HG4_PB_SVrefine2PBcRDovetail_5244:HG4_PB_SVrefine2Falcon1Dovetail_6403:HG4_Ill_scalpel_9708:HG4_Ill_manta_2537:HG4_Ill_SVrefine2DISCOVARDovetail_7565:HG4_Ill_GATKHCSBGrefine_7266:HG3_PB_SVrefine2PBcRDovetail_4849:HG3_PB_SVrefine2Falcon1Dovetail_6311:HG3_Ill_scalpel_10121:HG3_Ill_manta_2446:HG3_Ill_SVrefine2DISCOVARDovetail_7778:HG3_Ill_GATKHCSBGrefine_7042:HG3_10X_allpass_2108:HG2_PB_pbsv_10436:HG2_PB_SVrefine2PBcRplusDovetail_11671:HG2_PB_SVrefine2PB10Xhap12_7641:HG2_PB_SVrefine2Falcon2Bionano_4945:HG2_PB_SVrefine2Falcon1plusDovetail_12474:HG2_Ill_scalpel_9992:HG2_Ill_manta_2985:HG2_Ill_breakscan11_1513:HG2_Ill_SVrefine2DISCOVARplusDovetail_13676:HG2_Ill_MetaSV_5412:HG2_Ill_GATKHCSBGrefine_7135:HG2_10X_allpass_1745;NumExactMatchSVs=26;ClusterMaxShiftDist=0.147105;ClusterMaxSizeDiff=0.147105;ClusterMaxEditDist=0.147105;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=64314;DistForward=25167;DistMin=25167;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=24;REFWIDENED=9:100761059-100761412;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:20:0:20:./.:0:0:0:0:1/1:0:52:./.:1:15:.:.:.
chr9	101276313	HG3_Ill_manta_2448	TAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCTATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTTGTGGGGTAGGGGGAGGGGAGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCACACCAGCACGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAATAATAATAATAATAATAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7436:HG2_PB_pbsv_10438:HG4_PB_pbsv_10466:HG3_PB_pbsv_10184:HG4_PB_HySA_15316:HG2_PB_HySA_18967:HG3_PB_HySA_15804:HG3_Ill_MetaSV_5596:HG2_Ill_tnscope_1192:HG4_PB_SVrefine2PBcRDovetail_5249:HG4_PB_SVrefine2Falcon1Dovetail_6405:HG4_Ill_GATKHCSBGrefine_7267:HG4_10X_allpass_2032:HG3_PB_SVrefine2PBcRDovetail_4854:HG3_PB_SVrefine2Falcon1Dovetail_6313:HG3_Ill_manta_2448:HG2_PB_SVrefine2PBcRplusDovetail_11673:HG2_PB_SVrefine2PB10Xhap12_7643:HG2_PB_SVrefine2Falcon2Bionano_4947:HG2_PB_SVrefine2Falcon1plusDovetail_12476:HG2_Ill_SVrefine2DISCOVARplusDovetail_13679:HG2_Ill_MetaSV_5414:HG2_Ill_GATKHCSBGrefine_7136:HG2_10X_allpass_1746;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7436:HG4_PB_SVrefine2PBcRDovetail_5249:HG4_PB_SVrefine2Falcon1Dovetail_6405:HG4_Ill_GATKHCSBGrefine_7267:HG4_10X_allpass_2032:HG3_PB_SVrefine2PBcRDovetail_4854:HG3_PB_SVrefine2Falcon1Dovetail_6313:HG3_Ill_manta_2448:HG2_PB_SVrefine2PBcRplusDovetail_11673:HG2_PB_SVrefine2PB10Xhap12_7643:HG2_PB_SVrefine2Falcon2Bionano_4947:HG2_PB_SVrefine2Falcon1plusDovetail_12476:HG2_Ill_SVrefine2DISCOVARplusDovetail_13679:HG2_Ill_MetaSV_5414:HG2_Ill_GATKHCSBGrefine_7136:HG2_10X_allpass_1746;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0075662;ClusterMaxSizeDiff=0.0075662;ClusterMaxEditDist=0.0100883;PBcalls=14;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-395;DistBack=-394;DistForward=-327;DistMin=-394;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=382;REFWIDENED=9:101276314-101277090;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4220.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:./.:2:26:0:2:./.:0:0:0:0:1/1:0:32:./.:1:10:.:.:.
chr9	101309043	HG2_Ill_GATKHCSBGrefine_7137	ATCTCATTGGCCATCTCTTCTTTTTTAATGCTTCCCTTTTTTTGTTTCCTTTTGTTCCCGCTGGTTTTCAACTTTGTATCTATTCTTCTCTATTCTGGCTATGTGAATTAATCTTGCCTCAGGTCTCAGCCCGCTGGAGTACTTTTTAATAGGTACCTTGAGAAGGATAAAGGGTTGACAACTTACTGAGGATGGCCCTGTGTTGCACTGACACACGGCAGAATTTGGCTGGGCATGAAATTCTTGGGCTACCATTTCTCCCCTTTGAAACTACAAAGTGATGCAGAGGAGAAATTTGGGGCTGGCTTGATTGTCACTGATTGTCGTTCATTTGTAGGTACCCAGTTTCCTCTACCTGGAAGCCTGAAAGATTTTTTTTCCCCTTATTCCTGGAATTCAAAAAAATCGCACTCTTGATTTTATTTGGGATAAAGAGAGCCCTATACACGACCTGTATACAATCCATACACTCAAGTATTTCCAACTCAGTAAAAAAAAACCTAATATATATATATAAAATGACTATGCTATATTTATATTGTGTATATTGTTTTATATTTATATTTTTATAATATATTTAACATATTTATTACATATACATTTATAATATTGTATATATTATACATAATAAATATAGCATATGTAGTATGTTTATCATATATATATTTATATTATATTCCTATATATTCTTGTCTCTCCTCTGGGCCACAGGATTATCTGTATGTTGTCTCCTCATTCTCTAAATCCATATCTGTCCTATTTTCTTTTCATAATTGCATCTCTTAGTCCTTGTCCTCCTCAATCTAGAAGAGCATCTTATTTTACTGTATTTTATTACAAGGTATGTGCATATTAGCTTTCACTATTTTCTGGTAAAATGGCTGTACCCACAGCCCTAGCTGTAGGACATAAGTATTCTCATTTCTTCACATCCTGGCCAGTATTTGATATTATCTGACTTCCTAATTTTTGTTAGTCTTTCAGAGATAAAGTGGTACTTCATTATTGTTTGATTTTGCAGTGCTTTGCCTGGAATGTGGCTGAGTGGTGATACATAGACATGTTAGCTATTCGGGTTCTTTGTTCTGTGAGTTGCCTGACTTGCTTTTCAACAGCCTCAGTTTTAAGCCTTATTGACTTTAACATATTTGTATTGTGTTATTGACATTTTTAGTTTCCTATGAATTTTTCATGATCATCTCCCTTTTCGCCCCATCCTCCAATTGCAGGCTATTTCATGGAGCCTGCTTTGCTGCATATGATTGGGGAGGCTACACATCTTTCTAAAGTTTTCTTCTTTATCCTACAATAGATCATTTTCAGAGATGGACTCTTCCTCCACTTCTTCTGAGTACTCTGCTTTTTTTCATTATTTTTGAAGTACTTTTTCAAAGGTGTTTTAAATTTATTAATCCTCAAAAGCAAAGCAAGTGTTTTCAGGCTGGGCTTATCAAGAGACACATGTGGACGGCACTTGGCCCTGTTTTCTATTTACGTTTTAATTGCATATACTTCTCAGAAGGCCGGAGAATAAGTATTTAAGCACAGTTTTTGGTGTCTAGTAGGCTTTCACCTTAGGCTGGTCTACATTAAATAAGTGACATCATCTTTTACCCTCAGTGCCCAATTTTCTAATACTCTAGATCAACACAGTACATTAAATTCCCTTCCTGCACTGCTGCTAGGGTTTTTCTTTCCTGCCTAAAAAATTTCATGTGGGAAGTCTCTGCTTCCCAGAATGCAATTCACATCTAGTGTGCTCCCCTCCTCTTCTCATCCAGGTTTTTTTTCCCCCTAGGAATGTATAGCTCTGTCTGAGTTTAGTGAAAGAGAGATGAGAATAAAGAGAAAAAAGCAATTTGGTTGTCTCAGAGATCAGCAACTGTTAGGTAGAGGCAATAGCTATCCAATTTTCTAGTTGATATGAGTCCTGAGTCTAACTCAGATTGTAGGGGAGAAAGGAAAAGGTCTACCTGTTAATTTTCAACACAATTGTTATTTTATGAGGCAAGGTTTGGAATGCTAGGAAGCAAAGCTTAGGATTTTCTCAATCTAGAGCCATCTACTTTGTAATTAATGAAGCTTCTAAACATCTAGAATATCAATGAGTATTGGGGTCTCTTGGTTCCTTGAGAGTGTATGTATGTGTATGTTTTTTTGTTTGTTTATTTGTTTGGTTGGTTGGTTTTCTTTGAGATGGAGTCCTGCTCTATCGCCCAGGCTGGAGTGCAGTGGTGCAATCTCAGGTCACTGCAACCTCCGCCTCCCGATTGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGCAGTGATTACAGGCACCCACCACCATGCCCAGCTAATTTCTTTTTGTTTTGGGATTTTTAGTAAAGATGGGGGTTTCACCATGTTGGACAGGCTGGTCTTGCGCTCCTGACCTCAGGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGCTTCTTTTCCATGTTTTGATAGTTTCAAAGGAAAGCTAAAAAAATGTTTTATTGGGTACCAAATGTTTTATTGAGTAGCCAAATACCCTTTTTTTTCATTTTTGGTTTATGCCATTTATTTATTTAGTAAACCATATGT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_10467:HG4_10X_allpass_2033:HG2_10X_allpass_1747:HG4_Ill_Krunchall_14687:HG3_Ill_Krunchall_14167:HG4_PB_assemblyticsfalcon_27365:HG2_PB_assemblyticsfalcon_27960:HG3_PB_assemblyticsfalcon_27861:HG2_PB_assemblyticsPBcR_27207:HG3_10X_allpass_2110:HG2_Ill_tnscope_1193:HG4_PB_SVrefine2PBcRDovetail_5250:HG4_PB_SVrefine2Falcon1Dovetail_6406:HG4_Ill_SVrefine2DISCOVARDovetail_7570:HG4_Ill_MetaSV_5651:HG3_PB_pbsv_10185:HG3_PB_SVrefine2PBcRDovetail_4855:HG3_PB_SVrefine2Falcon1Dovetail_6314:HG3_Ill_SVrefine2DISCOVARDovetail_7783:HG3_Ill_MetaSV_5597:HG2_PB_pbsv_10439:HG2_PB_SVrefine2PBcRplusDovetail_11674:HG2_PB_SVrefine2PB10Xhap12_7644:HG2_PB_SVrefine2Falcon2Bionano_4948:HG2_PB_SVrefine2Falcon1plusDovetail_12477:HG2_Ill_SpiralSDKrefine_18004:HG2_Ill_SVrefine2DISCOVARplusDovetail_13680:HG2_Ill_MetaSV_5415:HG2_Ill_GATKHCSBGrefine_7137:HG2_10X_SVrefine210Xhap12_7437:HG2_Ill_breakscan11_1514;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7437:HG2_Ill_GATKHCSBGrefine_7137:HG2_Ill_MetaSV_5415:HG2_Ill_SVrefine2DISCOVARplusDovetail_13680:HG2_Ill_SpiralSDKrefine_18004:HG2_PB_SVrefine2Falcon1plusDovetail_12477:HG2_PB_SVrefine2Falcon2Bionano_4948:HG2_PB_SVrefine2PB10Xhap12_7644:HG2_PB_SVrefine2PBcRplusDovetail_11674:HG2_PB_pbsv_10439:HG3_Ill_MetaSV_5597:HG3_Ill_SVrefine2DISCOVARDovetail_7783:HG3_PB_SVrefine2Falcon1Dovetail_6314:HG3_PB_SVrefine2PBcRDovetail_4855:HG3_PB_pbsv_10185:HG4_Ill_MetaSV_5651:HG4_Ill_SVrefine2DISCOVARDovetail_7570:HG4_PB_SVrefine2Falcon1Dovetail_6406:HG4_PB_SVrefine2PBcRDovetail_5250;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0118888;ClusterMaxSizeDiff=0.0118888;ClusterMaxEditDist=0.0118888;PBcalls=15;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2621;DistBack=28839;DistForward=27521;DistMin=27521;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=9:101309044-101311669;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:119:./.:0:0:0:0:./.:0:0:0:0:1/1:0:41:1/1:1:181:2843:.:.
chr9	101347985	HG4_Ill_GATKHCSBGrefine_7268	ATCTTATTCATGCCTCTCAATATTATTAAAAGGTATAGGCTGAGTATCCCTAATTCAAAAATCTGAAATCCAAAATGCTCCAAAATCCAAAACTTTTTGAGCACAAATATGACACTCAATAAAAATGTTCACTGGAGCATTTTGGATTTTGAATATTTGGATTTGGGATGTTCAGTCTTTAAATATAATGCAGCTATTTCAAAATCTGAAAAACCCCAAAATCTGAAACATTTCTAGACCCAAGTATTTTGGATAAGGGGTACTCAACCTGTACTGTTATTTCCCTTTTACAGATAAGGAATTTGAGGCTCAGAAATAATAACTTGCCCAAT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1515:HG4_PB_HySA_15319:HG4_Ill_MetaSV_5653:HG3_PB_HySA_15806:HG3_Ill_MetaSV_5598:HG2_PB_HySA_18970:HG2_Ill_tnscope_1194:HG2_Ill_MetaSV_5416:HG4_PB_assemblyticsfalcon_27368:HG4_PB_SVrefine2PBcRDovetail_5252:HG4_PB_SVrefine2Falcon1Dovetail_6408:HG4_Ill_manta_2538:HG4_Ill_GATKHCSBGrefine_7268:HG4_10X_allpass_2034:HG3_PB_pbsv_10187:HG3_PB_assemblyticsfalcon_27864:HG3_PB_SVrefine2PBcRDovetail_4856:HG3_PB_SVrefine2Falcon1Dovetail_6315:HG3_Ill_scalpel_10125:HG3_Ill_manta_2449:HG3_Ill_SVrefine2DISCOVARDovetail_7784:HG3_Ill_GATKHCSBGrefine_7046:HG3_10X_allpass_2111:HG2_PB_pbsv_10441:HG2_PB_assemblyticsfalcon_27963:HG2_PB_assemblyticsPBcR_27210:HG2_PB_SVrefine2PBcRplusDovetail_11675:HG2_PB_SVrefine2PB10Xhap12_7645:HG2_PB_SVrefine2Falcon2Bionano_4949:HG2_PB_SVrefine2Falcon1plusDovetail_12478:HG2_Ill_scalpel_9994:HG2_Ill_manta_2986:HG2_Ill_SpiralSDKrefine_18006:HG2_Ill_GATKHCSBGrefine_7138:HG2_10X_SVrefine210Xhap12_7438:HG4_PB_pbsv_10469:HG4_Ill_Krunchall_14690:HG3_Ill_Krunchall_14169;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7438:HG2_Ill_GATKHCSBGrefine_7138:HG2_Ill_SpiralSDKrefine_18006:HG2_Ill_manta_2986:HG2_Ill_scalpel_9994:HG2_PB_SVrefine2Falcon1plusDovetail_12478:HG2_PB_SVrefine2Falcon2Bionano_4949:HG2_PB_SVrefine2PB10Xhap12_7645:HG2_PB_SVrefine2PBcRplusDovetail_11675:HG2_PB_assemblyticsPBcR_27210:HG2_PB_assemblyticsfalcon_27963:HG2_PB_pbsv_10441:HG3_10X_allpass_2111:HG3_Ill_GATKHCSBGrefine_7046:HG3_Ill_SVrefine2DISCOVARDovetail_7784:HG3_Ill_manta_2449:HG3_Ill_scalpel_10125:HG3_PB_SVrefine2Falcon1Dovetail_6315:HG3_PB_SVrefine2PBcRDovetail_4856:HG3_PB_assemblyticsfalcon_27864:HG3_PB_pbsv_10187:HG4_10X_allpass_2034:HG4_Ill_GATKHCSBGrefine_7268:HG4_Ill_manta_2538:HG4_PB_SVrefine2Falcon1Dovetail_6408:HG4_PB_SVrefine2PBcRDovetail_5252:HG4_PB_assemblyticsfalcon_27368;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0060241;ClusterMaxSizeDiff=0.0060241;ClusterMaxEditDist=0.0060241;PBcalls=18;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=14;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-332;DistForward=9515;DistMin=-332;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:101347986-101348317;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:./.:0:11:0:0:./.:0:0:0:0:1/1:0:25:1/1:1:21:.:.:.
chr9	104219695	HG2_PB_pbsv_10445	CTGTTTCCTGGACTTGCCTTTCATATCTTTTTTCTTTCTTTCTTTCTTGCATCCTCTCTCATTTTTCTTAATTTAGGTGAGGAGAAAATGTTGTAATAACATGTAAATCAGATTAGATAAATAATGATGCTGTAACAAGCCTGGTGGCATAATAGTATATACGAAGGTGTTTACTGAAGTAGTGATTTTAACAGAAAATTTATCTATCAATCTATCTATCTATCTGAAGGAGATTTTAAGTGATTGTATTACCTTTATACCGTGAAATACTACAAAGCCATTAAAATGTATATATGAATACACACTACAGACATACAGACATACACACACATACAGGTGAGGAAAAGGGTGCAGGTAAAGAAACTAAGTTACAAAACAACTTGCATGTTATCCCTTTTTTGTAACACTGGATGTATGCTTCAATGTAAAGAGAAGATAAATTCACCAAAATATTAACTATGGTGATCATCTCAGAGTGGTGGAATTACAGAATTTTTTTTGAGACTGAGTCTTGCTCTATCGCCCAGGCTGGAATGCAGTGGCATGATCTCGGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCGCACTACCACGCCCGGCTAATTTTTGTATGTTTTAGTAGAGACAGGGTTTCACGA	C	20	PASS	ClusterIDs=HG4_Ill_MetaSV_5656:HG4_Ill_Krunchall_14706:HG3_Ill_Krunchall_14193:HG2_Ill_Krunchall_14465:HG3_PB_assemblyticsfalcon_27882:HG2_PB_assemblyticsPBcR_27229:HG4_PB_assemblyticsfalcon_27383:HG2_PB_assemblyticsfalcon_27979:HG3_Ill_Spiral_11057:HG2_Ill_tnscope_1195:HG4_PB_pbsv_10474:HG4_PB_SVrefine2PBcRDovetail_5257:HG4_PB_SVrefine2Falcon1Dovetail_6413:HG4_Ill_svaba_13186:HG4_Ill_manta_2539:HG4_Ill_SVrefine2DISCOVARDovetail_7578:HG4_Ill_GATKHCSBGrefine_7274:HG4_10X_allpass_2035:HG3_PB_pbsv_10190:HG3_PB_SVrefine2PBcRDovetail_4861:HG3_PB_SVrefine2Falcon1Dovetail_6322:HG3_Ill_svaba_13274:HG3_Ill_manta_2450:HG3_Ill_SVrefine2DISCOVARDovetail_7797:HG3_Ill_MetaSV_5599:HG3_Ill_GATKHCSBGrefine_7051:HG3_10X_allpass_2112:HG2_PB_pbsv_10445:HG2_PB_SVrefine2PBcRplusDovetail_11680:HG2_PB_SVrefine2PB10Xhap12_7650:HG2_PB_SVrefine2Falcon2Bionano_4954:HG2_PB_SVrefine2Falcon1plusDovetail_12483:HG2_Ill_svaba_13115:HG2_Ill_manta_2989:HG2_Ill_SpiralSDKrefine_18019:HG2_Ill_SVrefine2DISCOVARplusDovetail_13691:HG2_Ill_MetaSV_5417:HG2_Ill_GATKHCSBGrefine_7143:HG2_10X_allpass_1749:HG2_10X_SVrefine210Xhap12_7448:HG2_Ill_breakscan11_1517;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7448:HG2_10X_allpass_1749:HG2_Ill_GATKHCSBGrefine_7143:HG2_Ill_MetaSV_5417:HG2_Ill_SVrefine2DISCOVARplusDovetail_13691:HG2_Ill_SpiralSDKrefine_18019:HG2_Ill_manta_2989:HG2_Ill_svaba_13115:HG2_PB_SVrefine2Falcon1plusDovetail_12483:HG2_PB_SVrefine2Falcon2Bionano_4954:HG2_PB_SVrefine2PB10Xhap12_7650:HG2_PB_SVrefine2PBcRplusDovetail_11680:HG2_PB_pbsv_10445:HG3_10X_allpass_2112:HG3_Ill_GATKHCSBGrefine_7051:HG3_Ill_MetaSV_5599:HG3_Ill_SVrefine2DISCOVARDovetail_7797:HG3_Ill_manta_2450:HG3_Ill_svaba_13274:HG3_PB_SVrefine2Falcon1Dovetail_6322:HG3_PB_SVrefine2PBcRDovetail_4861:HG3_PB_pbsv_10190:HG4_10X_allpass_2035:HG4_Ill_GATKHCSBGrefine_7274:HG4_Ill_SVrefine2DISCOVARDovetail_7578:HG4_Ill_manta_2539:HG4_Ill_svaba_13186:HG4_PB_SVrefine2Falcon1Dovetail_6413:HG4_PB_SVrefine2PBcRDovetail_5257:HG4_PB_pbsv_10474;NumExactMatchSVs=30;ClusterMaxShiftDist=0.196417;ClusterMaxSizeDiff=0.196417;ClusterMaxEditDist=0.196417;PBcalls=15;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-683;DistBack=15291;DistForward=8144;DistMin=8144;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=9:104219696-104220382;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:1/1:0:16:0:15:./.:0:0:0:0:1/1:0:34:./.:3:27:.:.:.
chr9	104443961	HG2_10X_allpass_1750	TGAATATATCCCTATTCTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTGCAATTCCCACCTATGAGTGAGAATATGCAGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAGTGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATAGTGGTTTTGATTTGCATTTCTCTG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1518:HG3_PB_assemblyticsfalcon_27884:HG2_PB_assemblyticsPBcR_27231:HG4_PB_assemblyticsfalcon_27388:HG2_PB_assemblyticsfalcon_27982:HG4_Ill_Krunchall_14708:HG3_Ill_Krunchall_14196:HG2_Ill_Krunchall_14466:HG4_PB_pbsv_10476:HG3_PB_pbsv_10194:HG2_PB_pbsv_10447:HG2_Ill_tnscope_1196:HG4_PB_SVrefine2PBcRDovetail_5258:HG4_PB_SVrefine2Falcon1Dovetail_6415:HG4_Ill_manta_2540:HG4_Ill_SVrefine2DISCOVARDovetail_7580:HG4_Ill_MetaSV_5657:HG4_Ill_GATKHCSBGrefine_7276:HG4_10X_allpass_2036:HG3_PB_SVrefine2PBcRDovetail_4862:HG3_PB_SVrefine2Falcon1Dovetail_6324:HG3_Ill_manta_2452:HG3_Ill_SVrefine2DISCOVARDovetail_7800:HG3_Ill_MetaSV_5600:HG3_Ill_GATKHCSBGrefine_7053:HG3_10X_allpass_2113:HG2_PB_SVrefine2PBcRplusDovetail_11682:HG2_PB_SVrefine2PB10Xhap12_7652:HG2_PB_SVrefine2Falcon2Bionano_4956:HG2_PB_SVrefine2Falcon1plusDovetail_12485:HG2_Ill_manta_2990:HG2_Ill_SVrefine2DISCOVARplusDovetail_13695:HG2_Ill_MetaSV_5418:HG2_Ill_GATKHCSBGrefine_7145:HG2_10X_allpass_1750:HG2_10X_SVrefine210Xhap12_7450;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7450:HG2_10X_allpass_1750:HG2_Ill_GATKHCSBGrefine_7145:HG2_Ill_MetaSV_5418:HG2_Ill_SVrefine2DISCOVARplusDovetail_13695:HG2_Ill_manta_2990:HG2_PB_SVrefine2Falcon1plusDovetail_12485:HG2_PB_SVrefine2Falcon2Bionano_4956:HG2_PB_SVrefine2PB10Xhap12_7652:HG2_PB_SVrefine2PBcRplusDovetail_11682:HG3_10X_allpass_2113:HG3_Ill_GATKHCSBGrefine_7053:HG3_Ill_MetaSV_5600:HG3_Ill_SVrefine2DISCOVARDovetail_7800:HG3_Ill_manta_2452:HG3_PB_SVrefine2Falcon1Dovetail_6324:HG3_PB_SVrefine2PBcRDovetail_4862:HG4_10X_allpass_2036:HG4_Ill_GATKHCSBGrefine_7276:HG4_Ill_MetaSV_5657:HG4_Ill_SVrefine2DISCOVARDovetail_7580:HG4_Ill_manta_2540:HG4_PB_SVrefine2Falcon1Dovetail_6415:HG4_PB_SVrefine2PBcRDovetail_5258;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0461437;ClusterMaxSizeDiff=0.0461437;ClusterMaxEditDist=0.0461437;PBcalls=15;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-766;DistBack=22075;DistForward=124830;DistMin=22075;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=9:104443962-104444745;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4224.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:1/1:0:31:0:15:./.:0:0:0:0:1/1:0:42:1/1:1:22:.:.:.
chr9	104569694	HG2_10X_SVrefine210Xhap12_7451	TGCAGTAGAAAAGAAAAACCCATTTTCTGGGGAGAAATTCAAGCCAGCTGCAGAAATTTGCATAAGTAGCAAGGAGCCTAATGTTTAATCCCCAAGACCATGGGGAAAATGTCTCCAGGCCATGTCAGAGACCTTCATGGCAGCCCCTCCCATCACAGGCCTGCAGGCCCAGGCAGAAAAAGTGGTTTCATGGGCCGAGCCCAGGGTTCCCATGCTGTGTGGAGCCTAGGAACTCGGTGCCCTGTGCTCCAGCAGCTCCAGCAGTGATTGAAAGGGGCCAACATACAGCCGGGACTGTGGCTTCACAGGGTGTAAGCCCCAATCCTTGACAGCTTCCATGTGGTGTTGAGCCTGCAGGTGCACAGAAGTCAAGAATTGGGGTTTGGGAACCTCCGCCTAGATTTCAGAAGATGTATGGAAATGCCTGGATGCCCAGGCAAAAGTTTGTGGCAGGAGAGGGGCCCTCATGGAGAACTTCTGCTAGGGCAGTGGGGAAGGGAAATGTGGGGTTAGAGCCCCCACACAGAGTCCCTACTGGGGCATTGCCTAGTGGAGCTGTGAGGAGAGAGACACCATCCTCCAGACCCCAGAGTGATAGATCCTCCTACAGACTTGCACTGTGTGCCTGGAAAAGCTGTGGACACTCAACGCCAGGCTGTGAAAGCAGCTAGGAGGGAGACTGTACCCTGCAAAGCCACAGGGGTGGAGCTGCCCAAGGCCATGGGAACCCACCGCTTGCATCAGCGTGACCTGGATGTGAGATCTGGAGTCAAAGGAGATCATTTTGGA	T	20	PASS	ClusterIDs=HG2_10X_allpass_1751:HG2_Ill_Krunchall_14468:HG2_PB_HySA_18990:HG4_Ill_Krunchall_14709:HG2_Ill_Krunchall_14467:HG4_PB_assemblyticsfalcon_27389:HG2_Ill_tnscope_1197:HG4_PB_SVrefine2PBcRDovetail_5259:HG4_PB_SVrefine2Falcon1Dovetail_6416:HG4_Ill_MetaSV_5658:HG4_Ill_GATKHCSBGrefine_7277:HG4_10X_allpass_2037:HG2_PB_pbsv_10448:HG2_PB_SVrefine2Falcon1plusDovetail_12486:HG2_Ill_SpiralSDKrefine_18021:HG2_Ill_MetaSV_5419:HG2_10X_SVrefine210Xhap12_7451:HG4_PB_pbsv_10477;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7451:HG2_Ill_MetaSV_5419:HG2_Ill_SpiralSDKrefine_18021:HG2_PB_SVrefine2Falcon1plusDovetail_12486:HG2_PB_pbsv_10448:HG4_10X_allpass_2037:HG4_Ill_GATKHCSBGrefine_7277:HG4_Ill_MetaSV_5658:HG4_PB_SVrefine2Falcon1Dovetail_6416:HG4_PB_SVrefine2PBcRDovetail_5259;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0275517;ClusterMaxSizeDiff=0.0275517;ClusterMaxEditDist=0.0275517;PBcalls=7;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-788;DistBack=-278;DistForward=-787;DistMin=-787;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=9:104569695-104570484;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:56:22:./.:31:12:15:7:./.:0:0:0:0:0/1:55:10:0/1:83:17:.:.:.
chr9	105162485	HG2_PB_SVrefine2PBcRplusDovetail_11686	TTCTTGTTTTTTTTTTTTTGTTTGTTTGTTTTTTTTATTCTTTTTTCTTTTTTTTTTTTTTTATTATTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1519:HG4_PB_HySA_15344:HG2_PB_HySA_19001:HG2_PB_HySA_19000:HG3_PB_assemblyticsfalcon_27891:HG2_PB_assemblyticsfalcon_27990:HG4_PB_assemblyticsfalcon_27397:HG2_PB_assemblyticsPBcR_27239:HG4_Ill_Spiral_867:HG3_Ill_Spiral_11069:HG4_PB_pbsv_10481:HG4_PB_SVrefine2PBcRDovetail_5262:HG4_PB_SVrefine2Falcon1Dovetail_6419:HG4_Ill_svaba_13198:HG4_Ill_SVrefine2DISCOVARDovetail_7585:HG4_Ill_MetaSV_5659:HG4_Ill_GATKHCSBGrefine_7282:HG4_10X_allpass_2038:HG3_PB_pbsv_10200:HG3_PB_SVrefine2PBcRDovetail_4866:HG3_PB_SVrefine2Falcon1Dovetail_6327:HG3_Ill_svaba_13286:HG3_Ill_scalpel_10148:HG3_Ill_manta_2455:HG3_Ill_SVrefine2DISCOVARDovetail_7806:HG3_Ill_MetaSV_5601:HG3_Ill_GATKHCSBGrefine_7058:HG3_10X_allpass_2114:HG2_PB_pbsv_10452:HG2_PB_SVrefine2PBcRplusDovetail_11686:HG2_PB_SVrefine2PB10Xhap12_7657:HG2_PB_SVrefine2Falcon2Bionano_4961:HG2_PB_SVrefine2Falcon1plusDovetail_12489:HG2_Ill_svaba_13125:HG2_Ill_scalpel_10012:HG2_Ill_manta_2992:HG2_Ill_SVrefine2DISCOVARplusDovetail_13698:HG2_Ill_MetaSV_5420:HG2_Ill_GATKHCSBGrefine_7151:HG2_10X_SVrefine210Xhap12_7455:HG3_PB_HySA_15823;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7455:HG2_Ill_GATKHCSBGrefine_7151:HG2_Ill_MetaSV_5420:HG2_Ill_SVrefine2DISCOVARplusDovetail_13698:HG2_Ill_manta_2992:HG2_Ill_scalpel_10012:HG2_Ill_svaba_13125:HG2_PB_SVrefine2Falcon1plusDovetail_12489:HG2_PB_SVrefine2Falcon2Bionano_4961:HG2_PB_SVrefine2PB10Xhap12_7657:HG2_PB_SVrefine2PBcRplusDovetail_11686:HG2_PB_pbsv_10452:HG3_10X_allpass_2114:HG3_Ill_GATKHCSBGrefine_7058:HG3_Ill_MetaSV_5601:HG3_Ill_SVrefine2DISCOVARDovetail_7806:HG3_Ill_manta_2455:HG3_Ill_scalpel_10148:HG3_Ill_svaba_13286:HG3_PB_SVrefine2Falcon1Dovetail_6327:HG3_PB_SVrefine2PBcRDovetail_4866:HG3_PB_pbsv_10200:HG4_10X_allpass_2038:HG4_Ill_GATKHCSBGrefine_7282:HG4_Ill_MetaSV_5659:HG4_Ill_SVrefine2DISCOVARDovetail_7585:HG4_Ill_svaba_13198:HG4_PB_SVrefine2Falcon1Dovetail_6419:HG4_PB_SVrefine2PBcRDovetail_5262;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0720222;ClusterMaxSizeDiff=0.0720222;ClusterMaxEditDist=0.0720222;PBcalls=19;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-183;DistBack=-74;DistForward=-177;DistMin=-177;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=9:105162486-105162675;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4226.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:30:0|1:16:1:1:31:./.:0:0:0:0:0/1:23:23:./.:.:.:.:.:.
chr9	105522528	HG2_PB_SVrefine2Falcon2Bionano_4963	CTGTCTAGCTAAAGGATTGTAAACACACCAATCAGCACTCTGTAAAAACGCACCAATCAGCACTCTG	C	20	PASS	ClusterIDs=HG4_PB_HySA_15349:HG4_PB_pbsv_10483:HG2_PB_pbsv_10454:HG2_PB_HySA_19004:HG4_Ill_svaba_13201:HG4_Ill_scalpel_9733:HG4_Ill_SVrefine2DISCOVARDovetail_7586:HG4_Ill_Krunchall_14725:HG4_Ill_GATKHC_16974:HG4_Ill_GATKHCSBGrefine_7283:HG4_Ill_250bpfermikitraw_14035:HG4_Ill_150bpfermikitraw_13440:HG2_PB_SVrefine2PBcRplusDovetail_11688:HG2_PB_SVrefine2PB10Xhap12_7659:HG2_PB_SVrefine2Falcon2Bionano_4963:HG2_Ill_svaba_13126:HG2_Ill_scalpel_10014:HG2_Ill_SpiralSDKrefine_18028:HG2_Ill_SVrefine2DISCOVARplusDovetail_13699:HG2_Ill_Krunchall_14478:HG2_Ill_GATKHC_16956:HG2_Ill_GATKHCSBGrefine_7152:HG2_Ill_250bpfermikitraw_14155:HG2_Ill_150bpfermikitraw_13295:HG2_10X_SVrefine210Xhap12_7456;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7456:HG2_Ill_150bpfermikitraw_13295:HG2_Ill_250bpfermikitraw_14155:HG2_Ill_GATKHCSBGrefine_7152:HG2_Ill_GATKHC_16956:HG2_Ill_Krunchall_14478:HG2_Ill_SVrefine2DISCOVARplusDovetail_13699:HG2_Ill_SpiralSDKrefine_18028:HG2_Ill_scalpel_10014:HG2_Ill_svaba_13126:HG2_PB_SVrefine2Falcon2Bionano_4963:HG2_PB_SVrefine2PB10Xhap12_7659:HG2_PB_SVrefine2PBcRplusDovetail_11688:HG4_Ill_150bpfermikitraw_13440:HG4_Ill_250bpfermikitraw_14035:HG4_Ill_GATKHCSBGrefine_7283:HG4_Ill_GATKHC_16974:HG4_Ill_Krunchall_14725:HG4_Ill_SVrefine2DISCOVARDovetail_7586:HG4_Ill_scalpel_9733:HG4_Ill_svaba_13201;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.030303;PBcalls=7;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-66;DistBack=8820;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=108;REFWIDENED=9:105522529-105522702;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:36:./.:24:18:6:17:./.:0:0:0:0:0/1:24:25:./.:.:.:.:.:.
chr9	106782694	HG3_Ill_Krunchall_14222	ATATTGTAGGTGTACTCTGTATTGTAAGTGTACTCTGTATTGTGTAGTGTACTCTG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13309:HG3_PB_HySA_15841:HG2_PB_pbsv_10461:HG3_PB_pbsv_10210:HG3_PB_assemblyticsfalcon_27908:HG3_Ill_svaba_13303:HG3_Ill_scalpel_10158:HG3_Ill_Krunchall_14222:HG3_Ill_GATKHCSBGrefine_7066:HG3_Ill_250bpfermikitraw_13790:HG3_Ill_150bpfermikitraw_13354:HG2_PB_assemblyticsPBcR_27251:HG2_Ill_svaba_13140:HG2_Ill_manta_2997:HG2_Ill_GATKHCSBGrefine_7155:HG2_Ill_250bpfermikitraw_14170;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13309:HG3_PB_assemblyticsfalcon_27908:HG3_Ill_svaba_13303:HG3_Ill_scalpel_10158:HG3_Ill_Krunchall_14222:HG3_Ill_GATKHCSBGrefine_7066:HG3_Ill_250bpfermikitraw_13790:HG3_Ill_150bpfermikitraw_13354:HG2_PB_assemblyticsPBcR_27251:HG2_Ill_svaba_13140:HG2_Ill_manta_2997:HG2_Ill_GATKHCSBGrefine_7155:HG2_Ill_250bpfermikitraw_14170;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.0363636;PBcalls=5;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=-12;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=61;REFWIDENED=9:106782693-106782811;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:30:./.:4:14:11:8:./.:0:0:0:0:0/1:16:14:./.:.:.:.:.:.
chr9	107400973	HG4_10X_allpass_2044	GAAAAAAATCCTCCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11693:HG2_PB_SVrefine2PB10Xhap12_7667:HG2_Ill_Krunchall_14497:HG3_PB_assemblyticsfalcon_27914:HG2_PB_assemblyticsfalcon_28003:HG2_PB_assemblyticsPBcR_27257:HG2_Ill_Spiral_740:HG2_PB_pbsv_10466:HG4_Ill_MetaSV_5663:HG2_Ill_tnscope_1198:HG2_Ill_MetaSV_5424:HG4_PB_HySA_15370:HG4_Ill_scalpel_9744:HG4_Ill_manta_2546:HG4_Ill_GATKHCSBGrefine_7295:HG4_10X_allpass_2044:HG2_Ill_GATKHCSBGrefine_7157:HG4_PB_pbsv_10494:HG2_Ill_breakscan11_1520:HG2_PB_HySA_19026:HG4_PB_SVrefine2PBcRDovetail_5268:HG4_Ill_SVrefine2DISCOVARDovetail_7596:HG3_PB_SVrefine2Falcon1Dovetail_6334:HG2_PB_SVrefine2PB10Xhap12_7666:HG2_PB_SVrefine2Falcon1plusDovetail_12496:HG2_10X_SVrefine210Xhap12_7465;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7157:HG4_10X_allpass_2044:HG4_Ill_GATKHCSBGrefine_7295:HG4_Ill_manta_2546:HG4_Ill_scalpel_9744:HG4_PB_HySA_15370;NumExactMatchSVs=6;ClusterMaxShiftDist=0.172166;ClusterMaxSizeDiff=0.172166;ClusterMaxEditDist=0.217586;PBcalls=13;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=178;DistForward=85;DistMin=85;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=25;REFWIDENED=9:107400964-107401302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:29:0|1:23:0:1:26:./.:0:0:0:0:0/1:24:7:0/1:21:8:.:.:.
chr9	107596187	HG2_10X_SVrefine210Xhap12_7466	CTGCACAGATGTGCTGCCGGAAAAACAGCAGCTGCAAACTCAGCAAAAAGGAGAGGCATTTGCAACTCCTGTCACAGCTTCGACAGAGAAGATGAAGCTCTGGTTCTACCGAATTGGAGTCTCCAAGGGTCTGAAAACTGCTGCTTTATAAAAAAATCAGTCTTAGTTTCACTAACATTATAAGCTTTTCCCCCCTTGCGCCTTTGTATTTATTATTTCAATGGCAGCATAATGATTGTATAGAGTATATGTAATTTCATTAATTATTCCTATAGTGCTGAACATTTAGTCTATTTCCAATTTCTCACAATAACAATATAGCAATAACATTTTCTCTCATATGGTGACTTCTTTAAAATTATTTCAGTAGGCTACATCCCTGGGGGTGGGTGGAATGGAGGTACGCAGGATAGCATATTTTAAAATGGTTCTTTAAATTTTCATTCCAAATTGCTTTCCAATAGAGAATAGCAATTTATACCATCACCAGGAAGGTATGTATGTATTTTTGTTAACATAACAGACACAAAATTGTACCTCACAAGTTCACAGAGGCTAGGGTTAGCAATTCTGAAGCCACTTTATTTGGAACAAACAAAAGCAGAGTGAAGAGACGCAGCCTTTAGGGTGAAGTCGGCCCTGCCCAGTATGGTTTCTGAACAACATGGCCAAAAAGAATAGCAAGACTAGAAAGATGCGCCCACTGAGATCACTGAGCACGTGGCCTCTCTGGGGTGCTCGTGAGGGGCAGGAGACCTAAGACTGCCCGCAGGGGTGGAGGCAGAGAGAAAACAGGTCCCGAGGATGGGTGGCTAAAAGCAGCTCAGAAAAGAGAGCAAATCAGTGTCAGAGGGTTCCAAGACTTGCCCGAGAGAGGTGCCCTGGGACCTGTGGGGTGAGGCAACATGGGTAGACAG	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_741:HG4_Ill_Krunchall_14750:HG2_Ill_Krunchall_14498:HG2_Ill_tnscope_1199:HG4_PB_pbsv_10495:HG4_PB_SVrefine2PBcRDovetail_5269:HG4_PB_SVrefine2Falcon1Dovetail_6426:HG4_Ill_manta_2547:HG4_Ill_SVrefine2DISCOVARDovetail_7598:HG4_Ill_MetaSV_5664:HG4_Ill_GATKHCSBGrefine_7296:HG4_10X_allpass_2045:HG2_PB_pbsv_10467:HG2_PB_SVrefine2PBcRplusDovetail_11694:HG2_PB_SVrefine2PB10Xhap12_7669:HG2_PB_SVrefine2Falcon2Bionano_4970:HG2_PB_SVrefine2Falcon1plusDovetail_12497:HG2_Ill_manta_2998:HG2_Ill_breakscan11_1521:HG2_Ill_SVrefine2DISCOVARplusDovetail_13709:HG2_Ill_MetaSV_5425:HG2_Ill_GATKHCSBGrefine_7158:HG2_10X_allpass_1754:HG2_10X_SVrefine210Xhap12_7466;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7466:HG2_10X_allpass_1754:HG2_Ill_GATKHCSBGrefine_7158:HG2_Ill_MetaSV_5425:HG2_Ill_SVrefine2DISCOVARplusDovetail_13709:HG2_Ill_breakscan11_1521:HG2_Ill_manta_2998:HG2_PB_SVrefine2Falcon1plusDovetail_12497:HG2_PB_SVrefine2Falcon2Bionano_4970:HG2_PB_SVrefine2PB10Xhap12_7669:HG2_PB_SVrefine2PBcRplusDovetail_11694:HG2_PB_pbsv_10467:HG4_10X_allpass_2045:HG4_Ill_GATKHCSBGrefine_7296:HG4_Ill_MetaSV_5664:HG4_Ill_SVrefine2DISCOVARDovetail_7598:HG4_Ill_manta_2547:HG4_PB_SVrefine2Falcon1Dovetail_6426:HG4_PB_SVrefine2PBcRDovetail_5269:HG4_PB_pbsv_10495;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00218102;ClusterMaxSizeDiff=0.00218102;ClusterMaxEditDist=0.00218102;PBcalls=8;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-916;DistBack=-264;DistForward=-910;DistMin=-910;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=9:107596188-107597110;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:36:./.:20:9:11:16:./.:0:0:0:0:0/1:59:14:0/1:75:32:.:2524:.
chr9	107784990	HG4_Ill_GATKHCSBGrefine_7299	CTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTAATTTTATTTTATTTT	C	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_27422:HG4_Ill_Krunchall_14758:HG4_PB_pbsv_10500:HG4_Ill_Krunchall_14757:HG4_Ill_GATKHC_17016:HG4_Ill_GATKHCSBGrefine_7299:HG2_PB_assemblyticsPBcR_27260:HG2_Ill_scalpel_10032:HG2_Ill_manta_3000:HG2_Ill_SpiralSDKrefine_18045:HG2_Ill_Krunchall_14505:HG2_Ill_GATKHC_16983:HG2_Ill_GATKHCSBGrefine_7160:HG2_PB_pbsv_10472:HG2_PB_HySA_19034:HG4_Ill_scalpel_9750:HG3_PB_pbsv_10216:HG3_Ill_Krunchall_14229:HG3_Ill_GATKHC_16928:HG3_Ill_GATKHCSBGrefine_7070:HG3_Ill_250bpfermikitraw_13799:HG3_Ill_150bpfermikitraw_13364:HG2_PB_assemblyticsfalcon_28007;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7160:HG2_Ill_GATKHC_16983:HG2_Ill_Krunchall_14505:HG2_Ill_SpiralSDKrefine_18045:HG2_Ill_manta_3000:HG2_Ill_scalpel_10032:HG2_PB_assemblyticsPBcR_27260:HG4_Ill_GATKHCSBGrefine_7299:HG4_Ill_GATKHC_17016:HG4_Ill_Krunchall_14757:HG4_PB_pbsv_10500;NumExactMatchSVs=11;ClusterMaxShiftDist=0.196078;ClusterMaxSizeDiff=0.196078;ClusterMaxEditDist=0.196078;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=25071;DistForward=6709;DistMin=6709;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=25;REFWIDENED=9:107784990-107785070;PctSeqSimilarity=0.9533;PctSizeSimilarity=0.9091;PctRecOverlap=0.9107;SizeDiff=5;StartDistance=0;EndDistance=5;GTMatch=0;TruScore=92;MatchId=4231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:61:1/1:4:29:6:27:./.:0:0:0:0:1/1:1:53:./.:.:.:.:.:.
chr9	107803944	HG3_PB_SVrefine2Falcon1Dovetail_6336	TATATATATATACATATATATATATACACATATATATATACATATATATATACATATATATATACATATATATACACATATATATACGTATATATATACATATATATATAC	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_14760:HG4_PB_SVrefine2PBcRDovetail_5271:HG3_Ill_SVrefine2DISCOVARDovetail_7814:HG2_PB_SVrefine2PB10Xhap12_7673:HG4_Ill_SVrefine2DISCOVARDovetail_7600:HG2_Ill_SVrefine2DISCOVARplusDovetail_13714:HG4_Ill_Spiral_868:HG2_PB_assemblyticsfalcon_28008:HG3_Ill_Spiral_11091:HG3_PB_SVrefine2PBcRDovetail_4873:HG2_PB_SVrefine2Falcon2Bionano_4973:HG2_10X_SVrefine210Xhap12_7467:HG4_PB_assemblyticsfalcon_27424:HG2_PB_SVrefine2Falcon1plusDovetail_12500:HG2_PB_assemblyticsPBcR_27262:HG3_PB_assemblyticsfalcon_27920:HG2_Ill_manta_3001:HG3_PB_HySA_15856:HG2_PB_HySA_19036:HG4_PB_HySA_15376:HG2_Ill_Spiral_743:HG4_Ill_GATKHC_17019:HG4_Ill_GATKHCSBGrefine_7301:HG2_Ill_GATKHC_16986:HG2_Ill_GATKHCSBGrefine_7161:HG3_Ill_GATKHC_16931:HG3_Ill_GATKHCSBGrefine_7072:HG4_PB_pbsv_10501:HG4_Ill_GATKHC_17018:HG4_Ill_GATKHCSBGrefine_7300:HG3_PB_SVrefine2Falcon1Dovetail_6336:HG3_Ill_GATKHC_16930:HG3_Ill_GATKHCSBGrefine_7071:HG2_Ill_GATKHC_16985:HG4_PB_SVrefine2Falcon1Dovetail_6429:HG2_PB_SVrefine2PBcRplusDovetail_11697:HG3_PB_pbsv_10217:HG2_PB_pbsv_10473;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_GATKHC_16985:HG3_Ill_GATKHCSBGrefine_7071:HG3_Ill_GATKHC_16930:HG3_PB_SVrefine2Falcon1Dovetail_6336:HG4_Ill_GATKHCSBGrefine_7300:HG4_Ill_GATKHC_17018;NumExactMatchSVs=6;ClusterMaxShiftDist=0.214286;ClusterMaxSizeDiff=0.214286;ClusterMaxEditDist=0.223214;PBcalls=18;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-110;DistBack=5287;DistForward=12583;DistMin=5287;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=45;REFWIDENED=9:107803939-107804093;PctSeqSimilarity=0.9722;PctSizeSimilarity=0.9455;PctRecOverlap=0.9459;SizeDiff=6;StartDistance=-6;EndDistance=0;GTMatch=1;TruScore=95;MatchId=4232.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:40:1/1:1:23:2:21:./.:0:0:0:0:1/1:0:17:./.:.:.:.:.:.
chr9	109101755	HG2_10X_SVrefine210Xhap12_7473	GTTTTAAAGCTGTGTTATTCCTAATATTGCAGGAAGATTTGAATACCATGTCTATCTTACTCCAAAAAGGGTAACCTGGCATCTCTCACACGTAGGTCCATACCATACTTGAAAAACATCAAAATACCTGCTAATTCCTTTCTTT	TG	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7472:HG3_PB_pbsv_10222:HG4_Ill_GATKHC_17029:HG4_Ill_GATKHCSBGrefine_7308:HG3_Ill_GATKHC_16938:HG3_Ill_GATKHCSBGrefine_7078:HG2_Ill_GATKHC_16992:HG2_Ill_GATKHCSBGrefine_7165:HG4_PB_SVrefine2PBcRDovetail_5274:HG4_PB_SVrefine2Falcon1Dovetail_6434:HG4_Ill_SVrefine2DISCOVARDovetail_7607:HG3_PB_assemblyticsfalcon_27928:HG3_PB_SVrefine2PBcRDovetail_4876:HG3_PB_SVrefine2Falcon1Dovetail_6342:HG3_Ill_SVrefine2DISCOVARDovetail_7824:HG2_PB_assemblyticsfalcon_28013:HG2_PB_SVrefine2PBcRplusDovetail_11698:HG2_PB_SVrefine2PB10Xhap12_7675:HG2_PB_SVrefine2Falcon2Bionano_4975:HG2_PB_SVrefine2Falcon1plusDovetail_12503:HG2_PB_PB10Xdip_30717:HG2_10X_SVrefine210Xhap12_7473:HG4_Ill_Spiral_870:HG3_Ill_Spiral_11096:HG4_PB_assemblyticsfalcon_27434:HG2_PB_assemblyticsPBcR_27266:HG4_Ill_Krunchall_14770:HG3_Ill_Krunchall_14235:HG4_PB_pbsv_10508:HG2_PB_pbsv_10478:HG4_Ill_250bpfermikitraw_14077:HG4_Ill_150bpfermikitraw_13483:HG4_10X_allpass_2047:HG3_10X_allpass_2119:HG2_10X_allpass_1757:HG2_PB_HySA_19046;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7473:HG2_PB_PB10Xdip_30717:HG2_PB_SVrefine2Falcon1plusDovetail_12503:HG2_PB_SVrefine2Falcon2Bionano_4975:HG2_PB_SVrefine2PB10Xhap12_7675:HG2_PB_SVrefine2PBcRplusDovetail_11698:HG2_PB_assemblyticsfalcon_28013:HG3_Ill_SVrefine2DISCOVARDovetail_7824:HG3_PB_SVrefine2Falcon1Dovetail_6342:HG3_PB_SVrefine2PBcRDovetail_4876:HG3_PB_assemblyticsfalcon_27928:HG4_Ill_SVrefine2DISCOVARDovetail_7607:HG4_PB_SVrefine2Falcon1Dovetail_6434:HG4_PB_SVrefine2PBcRDovetail_5274;NumExactMatchSVs=14;ClusterMaxShiftDist=0.078853;ClusterMaxSizeDiff=0.078853;ClusterMaxEditDist=0.0869565;PBcalls=17;Illcalls=14;TenXcalls=5;CGcalls=0;PBexactcalls=11;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-143;DistBack=-175;DistForward=23740;DistMin=-175;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=148;REFWIDENED=9:109101644-109101934;PctSeqSimilarity=0.9936;PctSizeSimilarity=1;PctRecOverlap=0.469;SizeDiff=0;StartDistance=76;EndDistance=77;GTMatch=0;TruScore=82;MatchId=4233.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:35:1|0:3:41:32:0:./.:0:0:0:0:0/1:40:15:./.:.:.:.:.:.
chr9	110018277	HG3_PB_SVrefine2Falcon1Dovetail_6346	TATAAATCTTTTTTTTTTTTTTTTTTTTTAGCTTTTTTTTTTTTTTTTTTTTTTTTATTTATTTTTAATTTTTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGACAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCGCCTTTCCCGCCTTTCTATTCCACAAGGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCTGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGGCTGACCCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCCACTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGAGGCGGCTGGCCGGGCGTGGGGCTGACACCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGTCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCGGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGATGGGGTGGCTGCTGGGCGGAGATGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGTGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCAGCTGGGAGGTGTAGGTTGTAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGTTGGCGGATCACTCGCGGTTAGGGGCTGGAGACCGGCCCGGCCAACACAGCGAAACCCTGTCTCCACCAAAACCAGTCAGGCGTGGCGGCGCGTGCCTGCAATCGCAGGCACTCGGCAGACTGAGGCAGGAGAATCAGGCAGGGAGGATGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGCTCCGCATGAGAGGGAGACCGTGGGGAGAGGGAGAGCGAGAGGGAGACGGAGAGTGAGAGGGAGACGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGG	T	20	PASS	ClusterIDs=HG3_10X_allpass_2120:HG2_PB_assemblyticsfalcon_28019:HG3_PB_assemblyticsfalcon_27939:HG4_PB_assemblyticsfalcon_27441:HG2_PB_assemblyticsPBcR_27273:HG4_Ill_Krunchall_14776:HG3_Ill_Krunchall_14242:HG2_Ill_Krunchall_14514:HG2_PB_HySA_19058:HG2_10X_allpass_1758:HG4_PB_pbsv_10515:HG2_Ill_tnscope_1202:HG4_PB_SVrefine2PBcRDovetail_5278:HG4_PB_SVrefine2Falcon1Dovetail_6438:HG4_Ill_MetaSV_5669:HG4_Ill_GATKHCSBGrefine_7312:HG3_PB_pbsv_10227:HG3_PB_SVrefine2PBcRDovetail_4880:HG3_PB_SVrefine2Falcon1Dovetail_6346:HG3_Ill_SVrefine2DISCOVARDovetail_7828:HG3_Ill_MetaSV_5609:HG3_Ill_GATKHCSBGrefine_7079:HG2_PB_pbsv_10483:HG2_PB_SVrefine2PBcRplusDovetail_11701:HG2_PB_SVrefine2PB10Xhap12_7679:HG2_PB_SVrefine2Falcon2Bionano_4980:HG2_PB_SVrefine2Falcon1plusDovetail_12508:HG2_Ill_SVrefine2DISCOVARplusDovetail_13723:HG2_Ill_MetaSV_5429:HG2_Ill_GATKHCSBGrefine_7167:HG2_10X_SVrefine210Xhap12_7475;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7475:HG2_Ill_GATKHCSBGrefine_7167:HG2_Ill_MetaSV_5429:HG2_Ill_SVrefine2DISCOVARplusDovetail_13723:HG2_PB_SVrefine2Falcon1plusDovetail_12508:HG2_PB_SVrefine2Falcon2Bionano_4980:HG2_PB_SVrefine2PB10Xhap12_7679:HG2_PB_SVrefine2PBcRplusDovetail_11701:HG2_PB_pbsv_10483:HG3_Ill_GATKHCSBGrefine_7079:HG3_Ill_MetaSV_5609:HG3_Ill_SVrefine2DISCOVARDovetail_7828:HG3_PB_SVrefine2Falcon1Dovetail_6346:HG3_PB_SVrefine2PBcRDovetail_4880:HG3_PB_pbsv_10227:HG4_Ill_GATKHCSBGrefine_7312:HG4_Ill_MetaSV_5669:HG4_PB_SVrefine2Falcon1Dovetail_6438:HG4_PB_SVrefine2PBcRDovetail_5278;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0489297;ClusterMaxSizeDiff=0.0489297;ClusterMaxEditDist=0.0489297;PBcalls=16;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2571;DistBack=13648;DistForward=-2543;DistMin=-2543;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=9:110018278-110020861;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:125:./.:1:5:0:4:./.:0:0:0:0:1/1:0:45:1/1:5:148:4594:.:.
chr9	110033441	HG3_PB_SVrefine2Falcon1Dovetail_6347	TAATTATTATTATTGGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCAGGATGGCAGACGGAGTCGCGTTCACTCAGTGTTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTCCACCTCCCAGCTGCCTGCCTTGGCCCCCGAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGTAGCCTCTCTGTCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCTGCCGCCCCGTCTGGGATGTGAGGAGCGTCTCTGCCCGGCCACCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCGCCCCGTTTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCACACCGTCTGAGAAGTGAGGAGCCCCTCCGCCCAGCAGCCACCCCGTCTGGGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCCTCCGGAAGGGAGGTGGGGGGGTTAGCCCCGCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTAGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAAGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGAGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTATCAGCCCCCCGCCCAGCCAGCCACCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCACGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCAGCCAGCCGCCACGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGTGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTACTCAACAGCTCATTGAGAACGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAGGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTGAATGGATTAAGGGTGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCACTCCCTAATCTCAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTTTACCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTGTGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAATAAATAAATAAATAAATAAATAAAATAAAATAAAATAGCACAATTATAACAATATAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_5610:HG2_PB_pbsv_10484:HG2_10X_allpass_1759:HG4_10X_allpass_2048:HG2_PB_assemblyticsfalcon_28020:HG2_PB_assemblyticsPBcR_27274:HG4_PB_assemblyticsfalcon_27442:HG4_Ill_Krunchall_14777:HG3_Ill_Krunchall_14243:HG2_Ill_Krunchall_14515:HG3_10X_allpass_2121:HG3_PB_pbsv_10228:HG3_PB_assemblyticsfalcon_27942:HG3_Ill_GATKHCSBGrefine_7080:HG2_Ill_GATKHCSBGrefine_7169:HG4_PB_pbsv_10516:HG2_Ill_tnscope_1203:HG3_PB_assemblyticsfalcon_27941:HG3_PB_SVrefine2Falcon1Dovetail_6348:HG4_PB_SVrefine2PBcRDovetail_5279:HG4_PB_SVrefine2Falcon1Dovetail_6439:HG4_Ill_SVrefine2DISCOVARDovetail_7611:HG2_Ill_MetaSV_5430:HG4_Ill_MetaSV_5670:HG4_Ill_GATKHCSBGrefine_7313:HG3_PB_SVrefine2PBcRDovetail_4881:HG3_PB_SVrefine2Falcon1Dovetail_6347:HG3_Ill_SVrefine2DISCOVARDovetail_7829:HG2_PB_SVrefine2PBcRplusDovetail_11702:HG2_PB_SVrefine2PB10Xhap12_7680:HG2_PB_SVrefine2Falcon2Bionano_4981:HG2_PB_SVrefine2Falcon1plusDovetail_12509:HG2_Ill_SVrefine2DISCOVARplusDovetail_13724:HG2_Ill_GATKHCSBGrefine_7168:HG2_10X_SVrefine210Xhap12_7476;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7476:HG2_Ill_GATKHCSBGrefine_7168:HG2_Ill_SVrefine2DISCOVARplusDovetail_13724:HG2_PB_SVrefine2Falcon1plusDovetail_12509:HG2_PB_SVrefine2Falcon2Bionano_4981:HG2_PB_SVrefine2PB10Xhap12_7680:HG2_PB_SVrefine2PBcRplusDovetail_11702:HG3_Ill_SVrefine2DISCOVARDovetail_7829:HG3_PB_SVrefine2Falcon1Dovetail_6347:HG3_PB_SVrefine2PBcRDovetail_4881:HG4_Ill_GATKHCSBGrefine_7313:HG4_Ill_MetaSV_5670;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0140035;ClusterMaxSizeDiff=0.0140035;ClusterMaxEditDist=0.0140035;PBcalls=17;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2003;DistBack=15112;DistForward=-828;DistMin=-828;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=9:110033442-110035457;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9995;PctRecOverlap=0.9975;SizeDiff=1;StartDistance=-5;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=4235.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:1:10:0:31:./.:0:0:0:0:1/1:0:30:1/1:3:131:4594:.:.
chr9	110537520	HG3_PB_SVrefine2Falcon1Dovetail_6349	TTAAAAATATTTTGTAGAGACAAGAGACACAGTAATTGAAAAGAAAGAGGCGGCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCCCTCCCCCTCCCCCTCCCCCTCCGTCTCCGTCTCCGTCTCCGTCTCCCTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAACCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCAGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCCGGCCGCCCAGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCACCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCATCTGAGAAGTGAGGAGCCTCTCTGCCCAGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGAGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGCGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCTGCCCCGTCCGCGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCTGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGCGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGAGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGACCGGCCGGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTGCTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGACCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGCCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGACGGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACGGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAATAAATAAATAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1204:HG4_Ill_GATKHCSBGrefine_7315:HG3_Ill_GATKHCSBGrefine_7082:HG2_Ill_GATKHCSBGrefine_7170:HG2_PB_PB10Xdip_30727:HG2_Ill_SVrefine2DISCOVARplusDovetail_13727:HG4_Ill_Krunchall_14783:HG2_PB_pbsv_10486:HG2_Ill_breakscan11_1522:HG2_10X_allpass_1760:HG4_10X_allpass_2049:HG4_Ill_Krunchall_14782:HG3_Ill_Krunchall_14247:HG2_Ill_Krunchall_14520:HG3_PB_assemblyticsfalcon_27946:HG2_PB_assemblyticsfalcon_28026:HG4_Ill_MetaSV_5672:HG4_PB_assemblyticsfalcon_27445:HG2_PB_assemblyticsPBcR_27278:HG3_10X_allpass_2122:HG4_PB_pbsv_10518:HG4_PB_SVrefine2PBcRDovetail_5281:HG4_PB_SVrefine2Falcon1Dovetail_6440:HG4_Ill_SVrefine2DISCOVARDovetail_7614:HG3_PB_pbsv_10229:HG3_PB_SVrefine2PBcRDovetail_4882:HG3_PB_SVrefine2Falcon1Dovetail_6349:HG3_Ill_SVrefine2DISCOVARDovetail_7830:HG3_Ill_MetaSV_5611:HG3_Ill_GATKHCSBGrefine_7081:HG2_PB_SVrefine2PBcRplusDovetail_11703:HG2_PB_SVrefine2PB10Xhap12_7681:HG2_PB_SVrefine2Falcon2Bionano_4982:HG2_PB_SVrefine2Falcon1plusDovetail_12510:HG2_Ill_SVrefine2DISCOVARplusDovetail_13726:HG2_Ill_MetaSV_5431:HG2_10X_SVrefine210Xhap12_7478;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7478:HG2_Ill_MetaSV_5431:HG2_Ill_SVrefine2DISCOVARplusDovetail_13726:HG2_PB_SVrefine2Falcon1plusDovetail_12510:HG2_PB_SVrefine2Falcon2Bionano_4982:HG2_PB_SVrefine2PB10Xhap12_7681:HG2_PB_SVrefine2PBcRplusDovetail_11703:HG3_Ill_GATKHCSBGrefine_7081:HG3_Ill_MetaSV_5611:HG3_Ill_SVrefine2DISCOVARDovetail_7830:HG3_PB_SVrefine2Falcon1Dovetail_6349:HG3_PB_SVrefine2PBcRDovetail_4882:HG3_PB_pbsv_10229:HG4_Ill_SVrefine2DISCOVARDovetail_7614:HG4_PB_SVrefine2Falcon1Dovetail_6440:HG4_PB_SVrefine2PBcRDovetail_5281:HG4_PB_pbsv_10518;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00944933;ClusterMaxSizeDiff=0.00944933;ClusterMaxEditDist=0.00944933;PBcalls=16;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-3075;DistBack=21460;DistForward=-3061;DistMin=-3061;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=9:110537521-110540610;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4236.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:89:./.:0:0:0:0:./.:0:0:0:0:1/1:0:24:1/1:3:210:3082:.:.
chr9	112430200	HG2_10X_allpass_1761	TGGCTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGATTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1523:HG4_PB_SVrefine2PBcRDovetail_5286:HG2_PB_HySA_19075:HG3_PB_assemblyticsfalcon_27961:HG2_PB_assemblyticsfalcon_28043:HG2_PB_assemblyticsPBcR_27291:HG4_PB_assemblyticsfalcon_27455:HG2_Ill_Krunchall_14538:HG4_Ill_MetaSV_5675:HG3_Ill_MetaSV_5613:HG2_Ill_tnscope_1206:HG2_Ill_MetaSV_5433:HG4_PB_pbsv_10526:HG4_PB_SVrefine2Falcon1Dovetail_6445:HG4_Ill_scalpel_9772:HG4_Ill_manta_2559:HG4_Ill_GATKHCSBGrefine_7320:HG4_10X_allpass_2050:HG3_PB_pbsv_10235:HG3_PB_SVrefine2PBcRDovetail_4886:HG3_PB_SVrefine2Falcon1Dovetail_6353:HG3_Ill_scalpel_10193:HG3_Ill_manta_2464:HG3_Ill_SVrefine2DISCOVARDovetail_7840:HG3_Ill_GATKHCSBGrefine_7085:HG3_10X_allpass_2125:HG2_PB_pbsv_10492:HG2_PB_SVrefine2PBcRplusDovetail_11707:HG2_PB_SVrefine2PB10Xhap12_7685:HG2_PB_SVrefine2Falcon2Bionano_4987:HG2_PB_SVrefine2Falcon1plusDovetail_12516:HG2_Ill_scalpel_10056:HG2_Ill_manta_3006:HG2_Ill_SVrefine2DISCOVARplusDovetail_13737:HG2_Ill_GATKHCSBGrefine_7173:HG2_10X_allpass_1761:HG2_10X_SVrefine210Xhap12_7484;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7484:HG2_10X_allpass_1761:HG2_Ill_GATKHCSBGrefine_7173:HG2_Ill_SVrefine2DISCOVARplusDovetail_13737:HG2_Ill_manta_3006:HG2_Ill_scalpel_10056:HG2_PB_SVrefine2Falcon1plusDovetail_12516:HG2_PB_SVrefine2Falcon2Bionano_4987:HG2_PB_SVrefine2PB10Xhap12_7685:HG2_PB_SVrefine2PBcRplusDovetail_11707:HG2_PB_pbsv_10492:HG3_10X_allpass_2125:HG3_Ill_GATKHCSBGrefine_7085:HG3_Ill_SVrefine2DISCOVARDovetail_7840:HG3_Ill_manta_2464:HG3_Ill_scalpel_10193:HG3_PB_SVrefine2Falcon1Dovetail_6353:HG3_PB_SVrefine2PBcRDovetail_4886:HG3_PB_pbsv_10235:HG4_10X_allpass_2050:HG4_Ill_GATKHCSBGrefine_7320:HG4_Ill_manta_2559:HG4_Ill_scalpel_9772:HG4_PB_SVrefine2Falcon1Dovetail_6445:HG4_PB_pbsv_10526;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0741935;ClusterMaxSizeDiff=0.0741935;ClusterMaxEditDist=0.0962733;PBcalls=16;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=67298;DistForward=23641;DistMin=23641;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=9:112430201-112430527;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:0:23:0:19:./.:0:0:0:0:1/1:0:52:./.:2:24:.:.:.
chr9	112750842	HG4_Ill_150bpfermikitraw_13509	AGGAAGGAGGAAGGAAGGAAAAAAGGAAGAAAGGAAGGAAGGAAGGAACGAAGGAAGGATCGAAGGGAGGGAG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_10527:HG3_PB_HySA_15889:HG3_PB_pbsv_10236:HG2_PB_assemblyticsfalcon_28047:HG2_PB_pbsv_10493:HG4_PB_assemblyticsfalcon_27458:HG4_Ill_svaba_13268:HG4_Ill_scalpel_9776:HG4_Ill_Krunchall_14802:HG4_Ill_GATKHC_17060:HG4_Ill_GATKHCSBGrefine_7322:HG4_Ill_250bpfermikitraw_14104:HG4_Ill_150bpfermikitraw_13509:HG4_10X_allpass_2051:HG3_PB_assemblyticsfalcon_27965:HG3_Ill_svaba_13342:HG3_Ill_scalpel_10198:HG3_Ill_Krunchall_14265:HG3_Ill_GATKHC_16978:HG3_Ill_GATKHCSBGrefine_7086:HG3_Ill_250bpfermikitraw_13835:HG3_Ill_150bpfermikitraw_13401:HG3_10X_allpass_2126:HG2_Ill_svaba_13179:HG2_Ill_scalpel_10061:HG2_Ill_SpiralSDKrefine_18072:HG2_Ill_Krunchall_14543:HG2_Ill_GATKHC_17025:HG2_Ill_GATKHCSBGrefine_7174:HG2_Ill_250bpfermikitraw_14213:HG2_Ill_150bpfermikitraw_13357:HG2_10X_allpass_1762;NumClusterSVs=32;ExactMatchIDs=HG2_10X_allpass_1762:HG2_Ill_150bpfermikitraw_13357:HG2_Ill_250bpfermikitraw_14213:HG2_Ill_GATKHCSBGrefine_7174:HG2_Ill_GATKHC_17025:HG2_Ill_Krunchall_14543:HG2_Ill_SpiralSDKrefine_18072:HG2_Ill_scalpel_10061:HG2_Ill_svaba_13179:HG3_10X_allpass_2126:HG3_Ill_150bpfermikitraw_13401:HG3_Ill_250bpfermikitraw_13835:HG3_Ill_GATKHCSBGrefine_7086:HG3_Ill_GATKHC_16978:HG3_Ill_Krunchall_14265:HG3_Ill_scalpel_10198:HG3_Ill_svaba_13342:HG3_PB_assemblyticsfalcon_27965:HG4_10X_allpass_2051:HG4_Ill_150bpfermikitraw_13509:HG4_Ill_250bpfermikitraw_14104:HG4_Ill_GATKHCSBGrefine_7322:HG4_Ill_GATKHC_17060:HG4_Ill_Krunchall_14802:HG4_Ill_scalpel_9776:HG4_Ill_svaba_13268;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0680272;ClusterMaxSizeDiff=0.0680272;ClusterMaxEditDist=0.0680272;PBcalls=7;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-72;DistBack=66140;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=158;REFWIDENED=9:112750782-112751011;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:17:0|1:18:2:0:17:./.:0:0:0:0:0/1:26:21:./.:.:.:.:.:.
chr9	114554032	HG4_Ill_250bpfermikitraw_14125	GTAACCATATTTCTCAAGTGGTCTTGAGAATAACCATATTTCTCAAGTGGTCTTGAGAA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_14235:HG2_PB_pbsv_10506:HG3_PB_pbsv_10247:HG4_PB_pbsv_10544:HG4_Ill_250bpfermikitraw_14125:HG3_Ill_SVrefine2DISCOVARDovetail_7858:HG3_Ill_250bpfermikitraw_13856:HG2_PB_SVrefine2PBcRplusDovetail_11717:HG2_PB_SVrefine2PB10Xhap12_7694:HG2_PB_SVrefine2Falcon2Bionano_4996:HG2_Ill_SVrefine2DISCOVARplusDovetail_13755;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14235:HG4_Ill_250bpfermikitraw_14125:HG3_Ill_SVrefine2DISCOVARDovetail_7858:HG3_Ill_250bpfermikitraw_13856:HG2_PB_SVrefine2PBcRplusDovetail_11717:HG2_PB_SVrefine2PB10Xhap12_7694:HG2_PB_SVrefine2Falcon2Bionano_4996:HG2_Ill_SVrefine2DISCOVARplusDovetail_13755;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0172414;ClusterMaxSizeDiff=0.017094;ClusterMaxEditDist=0.0344828;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=-30;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=142;REFWIDENED=9:114554033-114554232;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=4239.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:49:1/1:6:17:1:29:./.:0:0:0:0:0/1:10:20:./.:.:.:.:.:.
chr9	114674185	HG3_Ill_GATKHCSBGrefine_7095	GATATATATATATATATATATATATATATATATATATATATATATATATATATTCAAC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1524:HG3_PB_pbsv_10248:HG3_Ill_svaba_13368:HG3_Ill_Krunchall_14284:HG3_Ill_GATKHCSBGrefine_7095:HG3_CG_vcfBeta_5714:HG3_10X_allpass_2127:HG2_PB_pbsv_10507:HG2_Ill_svaba_13203:HG2_Ill_SpiralSDKrefine_18087:HG2_Ill_Krunchall_14564:HG2_Ill_GATKHCSBGrefine_7182:HG2_CG_vcfBeta_6019;NumClusterSVs=13;ExactMatchIDs=HG2_CG_vcfBeta_6019:HG2_Ill_GATKHCSBGrefine_7182:HG2_Ill_Krunchall_14564:HG2_Ill_SpiralSDKrefine_18087:HG2_Ill_svaba_13203:HG2_PB_pbsv_10507:HG3_10X_allpass_2127:HG3_CG_vcfBeta_5714:HG3_Ill_GATKHCSBGrefine_7095:HG3_Ill_Krunchall_14284:HG3_Ill_svaba_13368:HG3_PB_pbsv_10248;NumExactMatchSVs=12;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0172414;PBcalls=2;Illcalls=8;TenXcalls=1;CGcalls=2;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=2;HG2count=7;HG3count=6;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-57;DistBack=24491;DistForward=4;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:114674184-114674244;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:22:0|1:19:4:1:17:./.:0:0:0:0:0/1:29:19:./.:.:.:.:.:.
chr9	115937084	HG4_Ill_manta_2567	TAAGAGCTAGGGAAATTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCATCCTGGGCGACAGAGCGAGACTCCGCCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7503:HG4_Ill_Krunchall_14838:HG3_Ill_Krunchall_14294:HG2_Ill_Krunchall_14574:HG4_PB_assemblyticsfalcon_27504:HG3_PB_assemblyticsfalcon_28002:HG2_PB_assemblyticsfalcon_28075:HG2_PB_assemblyticsPBcR_27322:HG4_PB_HySA_15431:HG4_Ill_Spiral_873:HG3_Ill_Spiral_11152:HG2_PB_HySA_19121:HG2_Ill_Spiral_746:HG2_Ill_tnscope_1207:HG2_Ill_MetaSV_5436:HG4_PB_pbsv_10556:HG4_Ill_manta_2567:HG4_Ill_SVrefine2DISCOVARDovetail_7637:HG4_Ill_MetaSV_5680:HG4_Ill_GATKHCSBGrefine_7340:HG4_10X_allpass_2054:HG3_PB_pbsv_10260:HG3_PB_SVrefine2PBcRDovetail_4899:HG3_PB_SVrefine2Falcon1Dovetail_6371:HG3_Ill_manta_2469:HG3_Ill_SVrefine2DISCOVARDovetail_7864:HG3_Ill_MetaSV_5617:HG3_Ill_GATKHCSBGrefine_7101:HG3_10X_allpass_2129:HG2_PB_pbsv_10517:HG2_PB_SVrefine2PBcRplusDovetail_11722:HG2_PB_SVrefine2PB10Xhap12_7701:HG2_PB_SVrefine2Falcon2Bionano_5003:HG2_PB_SVrefine2Falcon1plusDovetail_12528:HG2_Ill_scalpel_10077:HG2_Ill_manta_3016:HG2_Ill_breakscan11_1525:HG2_Ill_SpiralSDKrefine_18093:HG2_Ill_SVrefine2DISCOVARplusDovetail_13763:HG2_Ill_GATKHCSBGrefine_7191:HG2_10X_allpass_1764;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7503:HG4_PB_pbsv_10556:HG4_Ill_manta_2567:HG4_Ill_SVrefine2DISCOVARDovetail_7637:HG4_Ill_MetaSV_5680:HG4_Ill_GATKHCSBGrefine_7340:HG4_10X_allpass_2054:HG3_PB_pbsv_10260:HG3_PB_SVrefine2PBcRDovetail_4899:HG3_PB_SVrefine2Falcon1Dovetail_6371:HG3_Ill_manta_2469:HG3_Ill_SVrefine2DISCOVARDovetail_7864:HG3_Ill_MetaSV_5617:HG3_Ill_GATKHCSBGrefine_7101:HG3_10X_allpass_2129:HG2_PB_pbsv_10517:HG2_PB_SVrefine2PBcRplusDovetail_11722:HG2_PB_SVrefine2PB10Xhap12_7701:HG2_PB_SVrefine2Falcon2Bionano_5003:HG2_PB_SVrefine2Falcon1plusDovetail_12528:HG2_Ill_scalpel_10077:HG2_Ill_manta_3016:HG2_Ill_breakscan11_1525:HG2_Ill_SpiralSDKrefine_18093:HG2_Ill_SVrefine2DISCOVARplusDovetail_13763:HG2_Ill_GATKHCSBGrefine_7191:HG2_10X_allpass_1764;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0862069;ClusterMaxSizeDiff=0.0862069;ClusterMaxEditDist=0.0862069;PBcalls=15;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-295;DistBack=5778;DistForward=31552;DistMin=5778;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=9:115937085-115937392;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:80:1/1:4:35:0:32:./.:0:0:0:0:1/1:0:45:./.:.:.:.:.:.
chr9	118109642	HG4_Ill_svaba_13312	GGGCAATCAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTGGCCCAGGTGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5441:HG3_PB_assemblyticsfalcon_28019:HG4_Ill_Krunchall_14863:HG3_Ill_Krunchall_14313:HG2_Ill_Krunchall_14595:HG2_PB_assemblyticsfalcon_28097:HG2_PB_assemblyticsPBcR_27341:HG4_PB_assemblyticsfalcon_27521:HG3_PB_pbsv_10272:HG3_PB_HySA_15939:HG2_PB_pbsv_10528:HG4_PB_HySA_15454:HG2_PB_HySA_19147:HG4_PB_pbsv_10571:HG4_PB_SVrefine2PBcRDovetail_5306:HG4_Ill_svaba_13312:HG4_Ill_scalpel_9811:HG4_Ill_SVrefine2DISCOVARDovetail_7644:HG4_Ill_GATKHCSBGrefine_7347:HG3_PB_SVrefine2PBcRDovetail_4906:HG3_PB_SVrefine2Falcon1Dovetail_6379:HG3_Ill_svaba_13387:HG3_Ill_scalpel_10229:HG3_Ill_manta_2473:HG3_Ill_SVrefine2DISCOVARDovetail_7874:HG3_Ill_GATKHCSBGrefine_7108:HG3_10X_allpass_2131:HG2_PB_SVrefine2PBcRplusDovetail_11728:HG2_PB_SVrefine2PB10Xhap12_7708:HG2_PB_SVrefine2Falcon2Bionano_5011:HG2_PB_SVrefine2Falcon1plusDovetail_12537:HG2_Ill_svaba_13224:HG2_Ill_scalpel_10090:HG2_Ill_manta_3018:HG2_Ill_breakscan11_1527:HG2_Ill_SVrefine2DISCOVARplusDovetail_13772:HG2_Ill_GATKHCSBGrefine_7198:HG2_10X_allpass_1766:HG2_10X_SVrefine210Xhap12_7516:HG4_PB_SVrefine2Falcon1Dovetail_6473:HG4_Ill_MetaSV_5685:HG3_Ill_MetaSV_5620:HG2_PB_HySA_19146:HG2_Ill_tnscope_1208;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7516:HG2_10X_allpass_1766:HG2_Ill_GATKHCSBGrefine_7198:HG2_Ill_SVrefine2DISCOVARplusDovetail_13772:HG2_Ill_breakscan11_1527:HG2_Ill_manta_3018:HG2_Ill_scalpel_10090:HG2_Ill_svaba_13224:HG2_PB_SVrefine2Falcon1plusDovetail_12537:HG2_PB_SVrefine2Falcon2Bionano_5011:HG2_PB_SVrefine2PB10Xhap12_7708:HG2_PB_SVrefine2PBcRplusDovetail_11728:HG3_10X_allpass_2131:HG3_Ill_GATKHCSBGrefine_7108:HG3_Ill_SVrefine2DISCOVARDovetail_7874:HG3_Ill_manta_2473:HG3_Ill_scalpel_10229:HG3_Ill_svaba_13387:HG3_PB_SVrefine2Falcon1Dovetail_6379:HG3_PB_SVrefine2PBcRDovetail_4906:HG4_Ill_GATKHCSBGrefine_7347:HG4_Ill_SVrefine2DISCOVARDovetail_7644:HG4_Ill_scalpel_9811:HG4_Ill_svaba_13312:HG4_PB_SVrefine2PBcRDovetail_5306:HG4_PB_pbsv_10571;NumExactMatchSVs=26;ClusterMaxShiftDist=0.079646;ClusterMaxSizeDiff=0.079646;ClusterMaxEditDist=0.079646;PBcalls=19;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-345;DistBack=4063;DistForward=12441;DistMin=4063;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=9:118109643-118110001;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4243.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:./.:0:8:0:4:./.:0:0:0:0:1/1:0:49:0/1:2:12:.:.:.
chr9	119051410	HG2_Ill_SpiralSDKrefine_18110	TATATATATATATATATATATATATATATAGCATATATATATAGCATATATGTAGCATATATATAGCATATATATATAGCATATATGTAGC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_10273:HG2_PB_HySA_19152:HG4_Ill_svaba_13317:HG4_Ill_Krunchall_14870:HG4_Ill_GATKHC_17128:HG3_Ill_svaba_13392:HG3_Ill_GATKHC_17039:HG3_Ill_250bpfermikitraw_13888:HG3_Ill_150bpfermikitraw_13452:HG4_Ill_svaba_13316:HG4_Ill_GATKHC_17127:HG4_Ill_GATKHCSBGrefine_7348:HG4_Ill_250bpfermikitraw_14163:HG3_Ill_svaba_13391:HG3_Ill_manta_2474:HG3_Ill_GATKHC_17038:HG3_Ill_250bpfermikitraw_13887:HG2_Ill_svaba_13229:HG2_Ill_scalpel_10095:HG2_Ill_manta_3019:HG2_Ill_SpiralSDKrefine_18110:HG2_Ill_Krunchall_14602:HG2_Ill_GATKHC_17090:HG2_Ill_250bpfermikitraw_14269:HG2_Ill_150bpfermikitraw_13411:HG2_PB_pbsv_10529:HG4_PB_pbsv_10573:HG4_Ill_SVrefine2DISCOVARDovetail_7649:HG2_PB_SVrefine2PBcRplusDovetail_11730:HG2_PB_SVrefine2PB10Xhap12_7711:HG2_PB_SVrefine2Falcon2Bionano_5012:HG2_PB_SVrefine2Falcon1plusDovetail_12539:HG2_Ill_SVrefine2DISCOVARplusDovetail_13775:HG2_10X_SVrefine210Xhap12_7521;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13411:HG2_Ill_250bpfermikitraw_14269:HG2_Ill_GATKHC_17090:HG2_Ill_Krunchall_14602:HG2_Ill_SpiralSDKrefine_18110:HG2_Ill_manta_3019:HG2_Ill_scalpel_10095:HG2_Ill_svaba_13229:HG3_Ill_250bpfermikitraw_13887:HG3_Ill_GATKHC_17038:HG3_Ill_manta_2474:HG3_Ill_svaba_13391:HG4_Ill_250bpfermikitraw_14163:HG4_Ill_GATKHCSBGrefine_7348:HG4_Ill_GATKHC_17127:HG4_Ill_svaba_13316;NumExactMatchSVs=16;ClusterMaxShiftDist=0.127168;ClusterMaxSizeDiff=0.127168;ClusterMaxEditDist=0.153846;PBcalls=8;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-90;DistBack=4011;DistForward=-79;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=9:119051409-119051512;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:60:1/1:1:8:2:17:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr9	121371514	HG3_Ill_150bpfermikitraw_13475	TTTATGTTTCACTTCCAAAAGATAGATTAACTGGACTGGAAATTCTGAGTTGAATA	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13429:HG3_PB_HySA_15967:HG2_PB_HySA_19178:HG4_PB_pbsv_10581:HG3_PB_pbsv_10281:HG2_PB_pbsv_10536:HG4_Ill_GATKHC_17155:HG4_Ill_GATKHCSBGrefine_7354:HG3_Ill_GATKHC_17063:HG3_Ill_GATKHCSBGrefine_7116:HG2_Ill_GATKHC_17111:HG2_Ill_GATKHCSBGrefine_7206:HG4_Ill_manta_2570:HG3_Ill_manta_2476:HG2_PB_PB10Xdip_30768:HG2_Ill_manta_3021:HG2_Ill_SpiralSDKrefine_18126:HG4_Ill_Spiral_874:HG3_Ill_Spiral_11187:HG2_Ill_Spiral_748:HG3_PB_assemblyticsfalcon_28045:HG4_PB_assemblyticsfalcon_27546:HG4_PB_HySA_15478:HG4_Ill_svaba_13341:HG4_Ill_Krunchall_14898:HG4_Ill_250bpfermikitraw_14184:HG4_Ill_150bpfermikitraw_13587:HG3_Ill_svaba_13416:HG3_Ill_Krunchall_14348:HG3_Ill_250bpfermikitraw_13917:HG3_Ill_150bpfermikitraw_13475:HG2_Ill_svaba_13252:HG2_Ill_Krunchall_14622:HG2_Ill_250bpfermikitraw_14293;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13429:HG4_PB_assemblyticsfalcon_27546:HG4_PB_HySA_15478:HG4_Ill_svaba_13341:HG4_Ill_Krunchall_14898:HG4_Ill_250bpfermikitraw_14184:HG4_Ill_150bpfermikitraw_13587:HG3_Ill_svaba_13416:HG3_Ill_Krunchall_14348:HG3_Ill_250bpfermikitraw_13917:HG3_Ill_150bpfermikitraw_13475:HG2_Ill_svaba_13252:HG2_Ill_Krunchall_14622:HG2_Ill_250bpfermikitraw_14293;NumExactMatchSVs=14;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.113208;PBcalls=9;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=15474;DistForward=24649;DistMin=15474;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=60;REFWIDENED=9:121371515-121371629;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:32:0|1:28:0:0:31:./.:0:0:0:0:0/1:22:17:./.:.:.:.:.:.
chr9	122531834	HG3_Ill_SVrefine2DISCOVARDovetail_7891	TAAGAAAATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_15978:HG4_Ill_Krunchall_14903:HG3_Ill_Krunchall_14353:HG2_Ill_Krunchall_14628:HG3_PB_assemblyticsfalcon_28049:HG4_PB_assemblyticsfalcon_27555:HG2_PB_assemblyticsfalcon_28128:HG2_PB_assemblyticsPBcR_27374:HG4_PB_HySA_15488:HG4_Ill_MetaSV_5691:HG3_Ill_MetaSV_5624:HG2_PB_HySA_19191:HG2_Ill_tnscope_1209:HG4_PB_pbsv_10588:HG4_PB_SVrefine2Falcon1Dovetail_6482:HG4_Ill_svaba_13347:HG4_Ill_scalpel_9842:HG4_Ill_manta_2572:HG4_Ill_SVrefine2DISCOVARDovetail_7663:HG4_Ill_GATKHCSBGrefine_7362:HG4_10X_allpass_2057:HG3_PB_SVrefine2PBcRDovetail_4916:HG3_PB_SVrefine2Falcon1Dovetail_6388:HG3_Ill_svaba_13423:HG3_Ill_scalpel_10251:HG3_Ill_manta_2477:HG3_Ill_SVrefine2DISCOVARDovetail_7891:HG3_Ill_GATKHCSBGrefine_7124:HG3_10X_allpass_2133:HG2_PB_pbsv_10545:HG2_PB_SVrefine2PBcRplusDovetail_11738:HG2_PB_SVrefine2PB10Xhap12_7720:HG2_PB_SVrefine2Falcon2Bionano_5021:HG2_PB_SVrefine2Falcon1plusDovetail_12547:HG2_Ill_svaba_13260:HG2_Ill_scalpel_10118:HG2_Ill_manta_3023:HG2_Ill_SVrefine2DISCOVARplusDovetail_13787:HG2_Ill_MetaSV_5445:HG2_Ill_GATKHCSBGrefine_7215:HG2_10X_allpass_1767:HG2_10X_SVrefine210Xhap12_7533:HG2_Ill_breakscan11_1528:HG3_PB_pbsv_10287;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7533:HG2_10X_allpass_1767:HG2_Ill_GATKHCSBGrefine_7215:HG2_Ill_MetaSV_5445:HG2_Ill_SVrefine2DISCOVARplusDovetail_13787:HG2_Ill_manta_3023:HG2_Ill_scalpel_10118:HG2_Ill_svaba_13260:HG2_PB_SVrefine2Falcon1plusDovetail_12547:HG2_PB_SVrefine2Falcon2Bionano_5021:HG2_PB_SVrefine2PB10Xhap12_7720:HG2_PB_SVrefine2PBcRplusDovetail_11738:HG2_PB_pbsv_10545:HG3_10X_allpass_2133:HG3_Ill_GATKHCSBGrefine_7124:HG3_Ill_SVrefine2DISCOVARDovetail_7891:HG3_Ill_manta_2477:HG3_Ill_scalpel_10251:HG3_Ill_svaba_13423:HG3_PB_SVrefine2Falcon1Dovetail_6388:HG3_PB_SVrefine2PBcRDovetail_4916:HG4_10X_allpass_2057:HG4_Ill_GATKHCSBGrefine_7362:HG4_Ill_SVrefine2DISCOVARDovetail_7663:HG4_Ill_manta_2572:HG4_Ill_scalpel_9842:HG4_Ill_svaba_13347:HG4_PB_SVrefine2Falcon1Dovetail_6482:HG4_PB_pbsv_10588;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0698413;ClusterMaxSizeDiff=0.0698413;ClusterMaxEditDist=0.0698413;PBcalls=17;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-784;DistForward=-306;DistMin=-784;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=9:122531835-122532163;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4246.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:0:23:1:22:./.:0:0:0:0:1/1:0:44:./.:1:16:.:.:.
chr9	124553210	HG2_Ill_svaba_13270	CCCCAATCCCTTTTCTCCGCGCCCCAACCTCTTATCTCTGTGCCCTAATCCCTTATTTCCACGCCCCAACCTCTTATCTCTGCGA	C	20	PASS	ClusterIDs=HG2_10X_allpass_1769:HG2_PB_HySA_19207:HG4_PB_HySA_15502:HG4_PB_pbsv_10597:HG4_Ill_svaba_13358:HG4_Ill_scalpel_9851:HG4_Ill_manta_2575:HG4_Ill_Krunchall_14919:HG4_Ill_GATKHC_17181:HG4_Ill_GATKHCSBGrefine_7368:HG4_10X_allpass_2060:HG2_PB_pbsv_10555:HG2_Ill_svaba_13270:HG2_Ill_scalpel_10126:HG2_Ill_Krunchall_14641:HG2_Ill_GATKHC_17136:HG2_Ill_GATKHCSBGrefine_7222:HG2_Ill_250bpfermikitraw_14311;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_1769:HG4_PB_pbsv_10597:HG4_Ill_svaba_13358:HG4_Ill_scalpel_9851:HG4_Ill_manta_2575:HG4_Ill_Krunchall_14919:HG4_Ill_GATKHC_17181:HG4_Ill_GATKHCSBGrefine_7368:HG4_10X_allpass_2060:HG2_PB_pbsv_10555:HG2_Ill_svaba_13270:HG2_Ill_scalpel_10126:HG2_Ill_Krunchall_14641:HG2_Ill_GATKHC_17136:HG2_Ill_GATKHCSBGrefine_7222:HG2_Ill_250bpfermikitraw_14311;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0232558;ClusterMaxSizeDiff=0.0232558;ClusterMaxEditDist=0.0346821;PBcalls=4;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-84;DistBack=1837;DistForward=15653;DistMin=1837;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=112;REFWIDENED=9:124553211-124553406;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:18:0|1:33:1:0:15:./.:0:0:0:0:0/1:22:11:./.:.:.:.:.:.
chr9	124642001	HG3_Ill_MetaSV_5627	TTTGGGAGGCTGAGGTGGGAGAACTGCTTGAAGCCCTGAATCTAGACCAGGCTGGGCAACATAGCGAGACCCCACTTCTACAAAAAATTAAAAATTAGTCAGCTCTGGTGGTACGCACCTGCGGTCCTAACTAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7542:HG3_PB_HySA_15995:HG2_Ill_SpiralSDKrefine_18135:HG3_Ill_Krunchall_14366:HG2_Ill_Krunchall_14644:HG2_PB_pbsv_10556:HG3_PB_pbsv_10295:HG4_PB_SVrefine2Falcon1Dovetail_6487:HG4_Ill_svaba_13359:HG4_Ill_scalpel_9854:HG4_Ill_manta_2576:HG4_Ill_MetaSV_5695:HG4_Ill_GATKHCSBGrefine_7370:HG4_10X_allpass_2061:HG3_PB_assemblyticsfalcon_28058:HG3_PB_SVrefine2PBcRDovetail_4921:HG3_PB_SVrefine2Falcon1Dovetail_6392:HG3_Ill_svaba_13432:HG3_Ill_manta_2480:HG3_Ill_SVrefine2DISCOVARDovetail_7898:HG3_Ill_MetaSV_5627:HG3_Ill_GATKHCSBGrefine_7130:HG3_Ill_250bpfermikitraw_13936:HG3_Ill_150bpfermikitraw_13494:HG3_10X_allpass_2134:HG2_PB_SVrefine2Falcon1plusDovetail_12552:HG2_Ill_svaba_13272:HG2_Ill_scalpel_10129:HG2_Ill_SVrefine2DISCOVARplusDovetail_13794:HG2_Ill_MetaSV_5448:HG2_Ill_GATKHCSBGrefine_7223:HG2_10X_allpass_1770;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7542:HG4_PB_SVrefine2Falcon1Dovetail_6487:HG4_Ill_svaba_13359:HG4_Ill_scalpel_9854:HG4_Ill_manta_2576:HG4_Ill_MetaSV_5695:HG4_Ill_GATKHCSBGrefine_7370:HG4_10X_allpass_2061:HG3_PB_assemblyticsfalcon_28058:HG3_PB_SVrefine2PBcRDovetail_4921:HG3_PB_SVrefine2Falcon1Dovetail_6392:HG3_Ill_svaba_13432:HG3_Ill_manta_2480:HG3_Ill_SVrefine2DISCOVARDovetail_7898:HG3_Ill_MetaSV_5627:HG3_Ill_GATKHCSBGrefine_7130:HG3_Ill_250bpfermikitraw_13936:HG3_Ill_150bpfermikitraw_13494:HG3_10X_allpass_2134:HG2_PB_SVrefine2Falcon1plusDovetail_12552:HG2_Ill_svaba_13272:HG2_Ill_scalpel_10129:HG2_Ill_SVrefine2DISCOVARplusDovetail_13794:HG2_Ill_MetaSV_5448:HG2_Ill_GATKHCSBGrefine_7223:HG2_10X_allpass_1770;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0075188;ClusterMaxSizeDiff=0.00749064;ClusterMaxEditDist=0.0449438;PBcalls=8;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=11;HG3count=14;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-133;DistBack=34849;DistForward=-104;DistMin=-104;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=9:124642002-124642165;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:19:0|1:24:2:1:24:./.:0:0:0:0:0/1:34:17:./.:.:.:.:.:.
chr9	125294351	HG2_Ill_GATKHCSBGrefine_7225	TGGGAGCAAATCCCTGAGCTTGATGTGTAGGGAAGGCAGGGGGCCTGAATAATCCCTGGGAAGTAGTAGAATAGCAAATTTGCCAGTCCTGGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7543:HG4_PB_assemblyticsfalcon_27570:HG3_PB_assemblyticsfalcon_28062:HG2_PB_assemblyticsfalcon_28150:HG4_PB_SVrefine2Falcon1Dovetail_6490:HG3_PB_SVrefine2Falcon1Dovetail_6395:HG2_PB_SVrefine2Falcon1plusDovetail_12555:HG4_Ill_svaba_13364:HG3_Ill_Krunchall_14367:HG3_Ill_GATKHC_17088:HG3_Ill_GATKHCSBGrefine_7134:HG3_Ill_250bpfermikitraw_13938:HG3_Ill_150bpfermikitraw_13495:HG2_Ill_GATKHC_17141:HG2_Ill_GATKHCSBGrefine_7225:HG2_Ill_250bpfermikitraw_14317:HG3_PB_pbsv_10299:HG4_PB_pbsv_10600:HG2_PB_pbsv_10560:HG4_Ill_GATKHC_17185:HG4_Ill_GATKHCSBGrefine_7372:HG3_Ill_GATKHC_17087:HG3_Ill_GATKHCSBGrefine_7133:HG2_Ill_GATKHC_17140:HG2_Ill_GATKHCSBGrefine_7224:HG4_PB_SVrefine2PBcRDovetail_5319:HG3_Ill_SVrefine2DISCOVARDovetail_7900:HG2_PB_SVrefine2Falcon2Bionano_5029:HG2_10X_SVrefine210Xhap12_7544:HG2_PB_assemblyticsPBcR_27394:HG2_PB_SVrefine2PBcRplusDovetail_11748:HG2_PB_SVrefine2PB10Xhap12_7729:HG4_Ill_GATKHCSBGrefine_7371:HG4_Ill_250bpfermikitraw_14207:HG3_Ill_250bpfermikitraw_13937:HG2_Ill_250bpfermikitraw_14316:HG4_Ill_SVrefine2DISCOVARDovetail_7671:HG3_PB_SVrefine2PBcRDovetail_4924:HG2_Ill_SVrefine2DISCOVARplusDovetail_13797;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14317:HG2_Ill_GATKHCSBGrefine_7225:HG2_Ill_GATKHC_17141:HG3_Ill_150bpfermikitraw_13495:HG3_Ill_250bpfermikitraw_13938:HG3_Ill_GATKHCSBGrefine_7134:HG3_Ill_GATKHC_17088:HG3_Ill_Krunchall_14367:HG4_Ill_svaba_13364;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0322581;ClusterMaxSizeDiff=0.0320856;ClusterMaxEditDist=0.0957447;PBcalls=15;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-93;DistBack=2299;DistForward=19832;DistMin=2299;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=190;REFWIDENED=9:125294237-125294519;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4249.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:0:21:1:21:./.:0:0:0:0:1/1:1:30:./.:.:.:.:.:.
chr9	128977408	HG4_Ill_GATKHC_17214	CTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_10622:HG2_PB_pbsv_10581:HG4_Ill_scalpel_9873:HG4_Ill_Krunchall_14946:HG4_Ill_GATKHC_17214:HG4_Ill_GATKHCSBGrefine_7383:HG4_Ill_250bpfermikitraw_14230:HG4_Ill_150bpfermikitraw_13632:HG2_Ill_scalpel_10145:HG2_Ill_Krunchall_14675:HG2_Ill_GATKHC_17172:HG2_Ill_GATKHCSBGrefine_7235:HG2_Ill_250bpfermikitraw_14345;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14345:HG2_Ill_GATKHCSBGrefine_7235:HG2_Ill_GATKHC_17172:HG2_Ill_Krunchall_14675:HG2_Ill_scalpel_10145:HG4_Ill_150bpfermikitraw_13632:HG4_Ill_250bpfermikitraw_14230:HG4_Ill_GATKHCSBGrefine_7383:HG4_Ill_GATKHC_17214:HG4_Ill_Krunchall_14946:HG4_Ill_scalpel_9873;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0176991;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.0530973;PBcalls=2;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-56;DistBack=10078;DistForward=-29;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=63;REFWIDENED=9:128977409-128977527;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:22:0|1:43:0:1:20:./.:0:0:0:0:0/1:22:12:./.:.:.:.:.:.
chr9	131118979	HG4_Ill_MetaSV_5706	AGGAGGCCAAGGTGGGCGGATCATTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAATGCCATCTCCACTAAAAATACAAACATAAAAATAAAAAAATTAGGCTGAGCATGGTGGCTCACACCTGTAATCTCAGCACTTTG	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7243:HG2_PB_HySA_19263:HG4_PB_pbsv_10641:HG4_PB_HySA_15549:HG4_Ill_svaba_13412:HG4_Ill_scalpel_9883:HG4_Ill_manta_2581:HG4_Ill_MetaSV_5706:HG4_Ill_GATKHC_17235:HG4_Ill_GATKHCSBGrefine_7390:HG4_10X_allpass_2064:HG2_PB_pbsv_10596:HG2_Ill_svaba_13323:HG2_Ill_scalpel_10157:HG2_Ill_SpiralSDKrefine_18170:HG2_Ill_MetaSV_5461:HG2_Ill_GATKHC_17197;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7243:HG4_PB_HySA_15549:HG4_Ill_svaba_13412:HG4_Ill_scalpel_9883:HG4_Ill_manta_2581:HG4_Ill_MetaSV_5706:HG4_Ill_GATKHC_17235:HG4_Ill_GATKHCSBGrefine_7390:HG4_10X_allpass_2064:HG2_PB_pbsv_10596:HG2_Ill_svaba_13323:HG2_Ill_scalpel_10157:HG2_Ill_SpiralSDKrefine_18170:HG2_Ill_MetaSV_5461:HG2_Ill_GATKHC_17197;NumExactMatchSVs=15;ClusterMaxShiftDist=0.013245;ClusterMaxSizeDiff=0.013245;ClusterMaxEditDist=0.013245;PBcalls=4;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-150;DistBack=39;DistForward=64946;DistMin=39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=273;REFWIDENED=9:131118797-131119219;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:21:0|1:24:1:2:16:./.:0:0:0:0:0/1:34:11:./.:.:.:.:.:.
chr9	131411992	HG3_PB_SVrefine2PBcRDovetail_4948	GGCCAGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCATGAGGTCAGGAGTTCAAGACCAGCCTAACCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGTGCGTGCCTGTAGTCTCAGCTACTAAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGACAGAGGTTGCAGTGAGCTGAGATCGCGCCATTGCACTCCAGCCTGGGTGGCAGAGCGAGACTCTAAAATATAAATAAATAAATGAAAAATTTTTTAAAAAACTACTGGAAAGCAGCTGGATTAAACTAGTGGTTCTAGTGGTTCTCAAACTTTGCTAAGCATTAGAATCATTTAGGGAGATATTATGAAACCAGATCCCCAGGTCATACCACATCCAAAGTAAGCCACAGTAACTGCAAGTAGAACCCAGGAGTCCACATTTTTCAACACTTTCCAGGGCATTCCAGTGTTGACTACCTTTGAGAAGAGGAATGAGGAGGCCCCCCTCAGCTGAGACAGCAGGGCCAGTCACTGACACTCAGAAACTCCACGTGAACAGCACTGGCTTTCACTTGGCTTTCTGGTCAACAGTCCCATTCAACCCCATAAGAAGTATCCTAACAATCGCACTTCACAGAAGAGAGACTGCGTTACTAGTCCAGGGCCAAGCCACTGATAAAAAGGATCTGCACCCTCAAACTCAGATCGAAAATTAAGGTCCAGGACACTGTCCCTCTAAACAGATAGGGACGTGGCAAGAAAAGTCAAGTCAGGCCAAAGACCATATATATATATATATATATATGCCACCACGCCCGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCTCCATGTCGGTCAGGCTGGTCTTCAACTCCCAGTCGACCTCAGTTGATCTGCAAGGCTCAGCCTCCCAAAGTGCTGGAATTACAGGCATGAACCACCACACCCAGCCCCATTTTTGTATTTTTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGAATTACAGGCGTGAGCCACCACGCCGGCCCATAGATTACTTGTATAAAGAACAAAAAGTTAACTCAAAAAGCACCAGGCAGCAGTGGCGCAGTAGTCACCATGACGGCTAAGGGGCTGGGTGCGGTTCTGCCAGGCTAGGAGCACAACCGGCACCCAGAATCTGTCGCCGCTGCTTGAACACAGCCTGCACCATGGCCACCTCTGCCCCCTCCTCGGAGCATGTCGGGAAGCGGCATGAGATCTTTCACTGTCTCTATGAAGGCCTACAAGGAGTGCCCAAGCACCTGCTGGGTGCAGTGGGGACCAAAGAGAAGTTGATCAGAGATTTTGATGAAAAGCAACAGGAAGGAAACAAAAAGCTGGCAGAGATGGAGGAGGAACTACATTATGCACCTCTATCTTTCCGTAACCCCATGATGTCTAAGCTTCAAAACTACCAGAAGGGCCGGGGGTAGTAGCTCATACCTGTAATCCTAGCACTTTAGGAGGTCGAGGTGGGCAGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGGTGAAACCCCATCTCTACTAATAATACAAACATTAACCGGCCGTGGTGGCGCACGGCTGTAATCCCAGCTTCTCGGGAGGCTGACGCAGGAGAATCGCTTAAACCCGGGAGGCAGAGGTCGCAGTGAGCCAAGATCGTACCACTGCACTCAAGCCTCAGCAACAGATCGAGACTGTCTCAAAAAACACTACTGGAAGGACCTTGCCAAACTATCAGGAGATGAGAAGCACACCTTGGAGAGCCACAACTGGAGGCCGAGGAGACATGAAATATGGCACACA	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_5464:HG3_10X_allpass_2139:HG4_10X_allpass_2066:HG4_PB_HySA_15553:HG2_PB_HySA_19273:HG3_PB_HySA_16042:HG4_PB_pbsv_10644:HG3_PB_pbsv_10339:HG3_Ill_MetaSV_5645:HG3_Ill_GATKHCSBGrefine_7163:HG2_Ill_SpiralSDKrefine_18172:HG2_Ill_tnscope_1214:HG2_PB_pbsv_10600:HG4_PB_SVrefine2PBcRDovetail_5346:HG4_PB_SVrefine2Falcon1Dovetail_6509:HG3_PB_SVrefine2PBcRDovetail_4948:HG3_PB_SVrefine2Falcon1Dovetail_6419:HG3_Ill_SVrefine2DISCOVARDovetail_7932:HG2_PB_SVrefine2PBcRplusDovetail_11772:HG2_PB_SVrefine2Falcon1plusDovetail_12579:HG2_Ill_SVrefine2DISCOVARplusDovetail_13830;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13830:HG2_PB_SVrefine2Falcon1plusDovetail_12579:HG2_PB_SVrefine2PBcRplusDovetail_11772:HG3_Ill_SVrefine2DISCOVARDovetail_7932:HG3_PB_SVrefine2Falcon1Dovetail_6419:HG3_PB_SVrefine2PBcRDovetail_4948:HG4_PB_SVrefine2Falcon1Dovetail_6509:HG4_PB_SVrefine2PBcRDovetail_5346;NumExactMatchSVs=8;ClusterMaxShiftDist=0.158229;ClusterMaxSizeDiff=0.158229;ClusterMaxEditDist=0.158229;PBcalls=12;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-1918;DistBack=86717;DistForward=-1661;DistMin=-1661;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=263;REFWIDENED=9:131411993-131414173;PctSeqSimilarity=0.9167;PctSizeSimilarity=0.999;PctRecOverlap=0.9656;SizeDiff=-2;StartDistance=-64;EndDistance=-66;GTMatch=0;TruScore=96;MatchId=4253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:19:./.:21:15:4:5:./.:0:0:0:0:./.:42:3:0/1:173:65:1877:.:.
chr9	132026685	HG2_PB_SVrefine2PB10Xhap12_7754	TGCTGGGATTACAGGTATGAGCCACCGTGCCCGTCCAATATACCCACTTTTAATTATTTCCAAATCAAGGGGCAGATTTTGCAGCGATTTTGAGAAAAAGAGTGGTAACTTCCCAATGATTGGGTTGTTGCCATGGAAAGGGGCAGTAACTGCCAGGTGTTGCCATGGCAATGGTAAACTGACATGGCACACCAGTGGGCGTGTCTTACAGAGAAGTGCTTTTGTCCCTTCCCTGTTTTAGCTAGTTCTCCATTTGATCAGGTGTTTGAGCCCCACCTCAGAGTCCAGTCCTGCCTCCTACCTCACGAAATGGCTGAGATTGAGAGACACATGTGGGCTGGGATTGAGGAAGGCCCAGAATTAGGGAGTAATGGGGTTTGGGGAGGACAGTTTACTGCCCAGGCTTGGTGGGGGTGGTGGGGAGTTGGTGTTCAGTCTAGCAGGTGAGAAGCAGCCACAGTGGGCCAGGGATAGGGGAGCATCGGAAATCACAGGGATGAGAAACAGTACTGAACAGACTTCTCCAGCCCTGACCAGACCTCAGTTCAGCAGGCGCTCAAATGACCATAGGTCCTATGAGGGAAGCTCTAAATCAACTTTCAAGCAAGAAAGGGAGCCCCCTGCTCCTCCATCTCATCCAGCCTCCTTCTATTTATTTATTTATTTATTTGAGACAGAGTCTCTCTCTGTCGCACAGACTGGAGCGCAGTGGTGAGATCTCGGCTCACTACAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGACTCAGCTTCCCGAGTAGCTGGGACTACAGGCATGGGCCACCACTCCCGGGTAATTTTTGTATTTTTAGTAGAGATGGGATTTTACCATCTTGGCCAGGTTGGTCTTGAACTCCTGACCTCAGGTGATCCACCTGCCTCTGCCTTCCAAAGTGCTAGGATGACAGTCACGAGCCACTGCGCCTGGTCCACCAGCCTCCTTCTAGAGCTGAAACTGACTGTGAGAAAATGTGGGCCTTCATCAGAAAATCCATTCATTCATATGCTCATTAATTCACTATCTACTAAGCAGCACTCTGTGCCAGGCACTGTTCTCGCCCAGAAACACAGCAGGAAAAAGAGACAAAACTTTCTGCCATCATGGCCTCTACGTTCTAGTGGAGGGAGATGGACAGTAAGTGAAAAACTGCGTACGTTATATACTTTATTAGAGGTGACAGATACTATACAATGGAGAAAAATAAAGGTGGGGAGGGCAGAGAGAGTCCCAGGAAAGGTGGTTTGTGATGTAAAATAAGGGGGATGGGCATGGTGGCTCACAAATGGGGCGTGGGCAAGATGAGCCTGGAGTTGACAAGGAAGGGTGGGCTTAAGCGATTCTTGTGCCTCAGCCTCCCGAGCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7580:HG2_PB_assemblyticsfalcon_28213:HG4_PB_assemblyticsfalcon_27635:HG3_PB_assemblyticsfalcon_28138:HG2_PB_assemblyticsPBcR_27460:HG3_10X_allpass_2140:HG2_10X_allpass_1773:HG3_PB_pbsv_10342:HG4_PB_pbsv_10649:HG2_Ill_tnscope_1215:HG4_PB_SVrefine2PBcRDovetail_5349:HG4_PB_SVrefine2Falcon1Dovetail_6512:HG4_Ill_MetaSV_5712:HG4_10X_allpass_2069:HG3_PB_SVrefine2Falcon1Dovetail_6421:HG3_Ill_SVrefine2DISCOVARDovetail_7935:HG3_Ill_MetaSV_5646:HG2_PB_pbsv_10605:HG2_PB_SVrefine2PBcRplusDovetail_11775:HG2_PB_SVrefine2PB10Xhap12_7754:HG2_PB_SVrefine2Falcon2Bionano_5055:HG2_PB_SVrefine2Falcon1plusDovetail_12582:HG2_Ill_SVrefine2DISCOVARplusDovetail_13836:HG2_Ill_MetaSV_5467:HG2_Ill_GATKHCSBGrefine_7250;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7580:HG4_PB_SVrefine2PBcRDovetail_5349:HG4_PB_SVrefine2Falcon1Dovetail_6512:HG4_Ill_MetaSV_5712:HG4_10X_allpass_2069:HG3_PB_SVrefine2Falcon1Dovetail_6421:HG3_Ill_SVrefine2DISCOVARDovetail_7935:HG3_Ill_MetaSV_5646:HG2_PB_pbsv_10605:HG2_PB_SVrefine2PBcRplusDovetail_11775:HG2_PB_SVrefine2PB10Xhap12_7754:HG2_PB_SVrefine2Falcon2Bionano_5055:HG2_PB_SVrefine2Falcon1plusDovetail_12582:HG2_Ill_SVrefine2DISCOVARplusDovetail_13836:HG2_Ill_MetaSV_5467:HG2_Ill_GATKHCSBGrefine_7250;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0430343;ClusterMaxSizeDiff=0.0430343;ClusterMaxEditDist=0.0430343;PBcalls=14;Illcalls=7;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1384;DistBack=24366;DistForward=-1355;DistMin=-1355;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=9:132026686-132028099;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4254.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:1:14:0:5:./.:0:0:0:0:1/1:0:40:1/1:3:74:1395:.:.
chr9	133039959	HG3_PB_SVrefine2PBcRDovetail_4953	TACCACCATCATCATCACCACCACCACCATCATCATCACCACCACCACCACCATCATCATCACCACCACCACCATCATCATCATCACCACCACCATCATCATCACC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13841:HG2_PB_assemblyticsPBcR_27475:HG4_PB_assemblyticsfalcon_27645:HG3_PB_assemblyticsfalcon_28153:HG4_PB_SVrefine2PBcRDovetail_5353:HG4_PB_SVrefine2Falcon1Dovetail_6517:HG3_PB_SVrefine2Falcon1Dovetail_6426:HG2_10X_SVrefine210Xhap12_7585:HG2_PB_SVrefine2PBcRplusDovetail_11781:HG2_PB_SVrefine2PB10Xhap12_7760:HG4_Ill_MetaSV_5715:HG3_PB_pbsv_10352:HG2_PB_pbsv_10613:HG4_PB_pbsv_10659:HG3_PB_SVrefine2PBcRDovetail_4953:HG2_PB_SVrefine2Falcon2Bionano_5061:HG2_PB_SVrefine2Falcon1plusDovetail_12589;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13841:HG3_PB_SVrefine2PBcRDovetail_4953:HG2_PB_SVrefine2Falcon2Bionano_5061:HG2_PB_SVrefine2Falcon1plusDovetail_12589;NumExactMatchSVs=4;ClusterMaxShiftDist=0.165939;ClusterMaxSizeDiff=0.165939;ClusterMaxEditDist=0.262009;PBcalls=14;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-105;DistBack=11869;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=316;REFWIDENED=9:133039960-133040380;PctSeqSimilarity=0.9593;PctSizeSimilarity=0.9722;PctRecOverlap=0.4312;SizeDiff=-3;StartDistance=-59;EndDistance=-62;GTMatch=1;TruScore=78;MatchId=4256.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:39:1/1:2:22:2:17:./.:0:0:0:0:0/0:18:1:./.:.:.:.:.:.
chr9	134461656	HG3_PB_SVrefine2Falcon1Dovetail_6432	CACACACACACACACACCTGCAGAGCCAGACTCCGTCTCAAACACACACACACACACACACCTGCAGAGCAAGACTCCGTCTCAAACACACACACACACACACACCCACCTGCAGAGCGAGACTCCGTCTCAAACACACACACACACACACCTGCAGAGCGAGACTCCGTCTCAAACACACACACACACACACACCTGCAGAGCGAGACTCCGTCTCAAACACACACACACACACCTGCAGAGCGAGACTCCGTCAAACACACACACACACACACACCTGCAGAGCGAGACTCCGTCTCAAACACACACACACACACCTGCAGAGCGAGACTCCGTCTCAAACACACACACACACACACACCTGCAGAGACTCCGTCTCAAACACACACACACACACACACCCCTGCAGAGTGAGACTCCGTCTCAAACACACACACACACCTGCAGAGCGAGACTCCGTCTCACACACACACCTGCAGAGCGAGACTCCGTCTCACACACACACCTGCAGAGCGAGACTCCGTCAAACACACACACACACACACACACCTGCAGAGCGAGACTCCGTCTCAAACACACACACACACACACACACACCTGCAGAGCGAGACTCCGTCTCAAACACACACACACACCTGCAGAGCGAGACTCCGTCTCAA	C	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6432:HG4_PB_SVrefine2Falcon1Dovetail_6523:HG4_PB_assemblyticsfalcon_27662:HG2_PB_pbsv_10621;NumClusterSVs=4;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_6432;NumExactMatchSVs=1;ClusterMaxShiftDist=0.072327;ClusterMaxSizeDiff=0.072327;ClusterMaxEditDist=0.132075;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-658;DistBack=-927;DistForward=-554;DistMin=-927;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=448;REFWIDENED=9:134461607-134462712;PctSeqSimilarity=0.95;PctSizeSimilarity=0.997;PctRecOverlap=0.7269;SizeDiff=2;StartDistance=-180;EndDistance=-178;GTMatch=0;TruScore=89;MatchId=4257.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:13:0|1:28:1:1:12:./.:0:0:0:0:./.:1:0:./.:48:3:.:.:.
chr9	134673906	HG2_10X_SVrefine210Xhap12_7593	TGCCCAGACCCAGTGGCCTGGAAGCCGTGGGAAGTAGCACATTCCTGGCAAGGGAAGAGATGCTCTCAGTGGAGAAAATACTAGGTGGAG	T	20	PASS	ClusterIDs=HG3_PB_pbsv_10365:HG3_PB_SVrefine2PBcRDovetail_4959:HG3_Ill_svaba_13525:HG3_Ill_scalpel_10333:HG3_Ill_Krunchall_14448:HG3_Ill_GATKHC_17189:HG3_Ill_GATKHCSBGrefine_7173:HG3_Ill_Cortex_3922:HG3_Ill_250bpfermikitraw_14012:HG3_Ill_150bpfermikitraw_13572:HG3_10X_allpass_2141:HG2_PB_pbsv_10623:HG2_Ill_svaba_13366:HG2_Ill_scalpel_10192:HG2_Ill_manta_3044:HG2_Ill_breakscan11_1533:HG2_Ill_SpiralSDKrefine_18194:HG2_Ill_Krunchall_14725:HG2_Ill_GATKHC_17241:HG2_Ill_GATKHCSBGrefine_7255:HG2_Ill_Cortex_9484:HG2_Ill_250bpfermikitraw_14395:HG2_Ill_150bpfermikitraw_13538:HG2_10X_allpass_1774:HG2_10X_SVrefine210Xhap12_7593:HG3_PB_HySA_16095;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7593:HG2_10X_allpass_1774:HG2_Ill_150bpfermikitraw_13538:HG2_Ill_250bpfermikitraw_14395:HG2_Ill_Cortex_9484:HG2_Ill_GATKHCSBGrefine_7255:HG2_Ill_GATKHC_17241:HG2_Ill_Krunchall_14725:HG2_Ill_SpiralSDKrefine_18194:HG2_Ill_breakscan11_1533:HG2_Ill_manta_3044:HG2_Ill_scalpel_10192:HG2_Ill_svaba_13366:HG2_PB_pbsv_10623:HG3_10X_allpass_2141:HG3_Ill_150bpfermikitraw_13572:HG3_Ill_250bpfermikitraw_14012:HG3_Ill_Cortex_3922:HG3_Ill_GATKHCSBGrefine_7173:HG3_Ill_GATKHC_17189:HG3_Ill_Krunchall_14448:HG3_Ill_scalpel_10333:HG3_Ill_svaba_13525:HG3_PB_SVrefine2PBcRDovetail_4959;NumExactMatchSVs=24;ClusterMaxShiftDist=0.021978;ClusterMaxSizeDiff=0.021978;ClusterMaxEditDist=0.0549451;PBcalls=4;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-89;DistBack=-90;DistForward=33979;DistMin=-90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=9:134673907-134673997;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:24:./.:12:8:6:8:./.:0:0:0:0:0/1:36:25:./.:.:.:.:.:.
chr9	135296997	HG3_Ill_150bpfermikitraw_13576	TGAGAATCCTGGGTTCTCATGCTCTGGTTTCTCTTCAAATCGTATAAATCTTTCGCCTTTTACTAAAGATTTCTGTG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1534:HG4_PB_HySA_15604:HG3_PB_HySA_16103:HG2_PB_HySA_19334:HG4_PB_pbsv_10676:HG3_PB_pbsv_10370:HG2_PB_pbsv_10627:HG3_PB_assemblyticsfalcon_28175:HG4_PB_SVrefine2Falcon1Dovetail_6527:HG4_Ill_svaba_13460:HG4_Ill_manta_2589:HG4_Ill_Krunchall_15004:HG4_Ill_GATKHC_17286:HG4_Ill_GATKHCSBGrefine_7412:HG4_Ill_250bpfermikitraw_14286:HG4_Ill_150bpfermikitraw_13694:HG4_10X_allpass_2070:HG3_Ill_svaba_13529:HG3_Ill_Krunchall_14453:HG3_Ill_GATKHC_17194:HG3_Ill_GATKHCSBGrefine_7175:HG3_Ill_250bpfermikitraw_14018:HG3_Ill_150bpfermikitraw_13576:HG3_10X_allpass_2142:HG2_Ill_svaba_13370:HG2_Ill_scalpel_10196:HG2_Ill_manta_3045:HG2_Ill_SpiralSDKrefine_18198:HG2_Ill_Krunchall_14730:HG2_Ill_GATKHC_17245:HG2_Ill_GATKHCSBGrefine_7256:HG2_Ill_250bpfermikitraw_14400:HG2_Ill_150bpfermikitraw_13542:HG2_10X_allpass_1775:HG2_PB_assemblyticsfalcon_28250:HG2_PB_assemblyticsPBcR_27499:HG3_Ill_Spiral_11267;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_1775:HG2_Ill_150bpfermikitraw_13542:HG2_Ill_250bpfermikitraw_14400:HG2_Ill_GATKHCSBGrefine_7256:HG2_Ill_GATKHC_17245:HG2_Ill_Krunchall_14730:HG2_Ill_SpiralSDKrefine_18198:HG2_Ill_manta_3045:HG2_Ill_scalpel_10196:HG2_Ill_svaba_13370:HG3_10X_allpass_2142:HG3_Ill_150bpfermikitraw_13576:HG3_Ill_250bpfermikitraw_14018:HG3_Ill_GATKHCSBGrefine_7175:HG3_Ill_GATKHC_17194:HG3_Ill_Krunchall_14453:HG3_Ill_svaba_13529:HG4_10X_allpass_2070:HG4_Ill_150bpfermikitraw_13694:HG4_Ill_250bpfermikitraw_14286:HG4_Ill_GATKHCSBGrefine_7412:HG4_Ill_GATKHC_17286:HG4_Ill_Krunchall_15004:HG4_Ill_manta_2589:HG4_Ill_svaba_13460:HG4_PB_SVrefine2Falcon1Dovetail_6527;NumExactMatchSVs=26;ClusterMaxShiftDist=0.025974;ClusterMaxSizeDiff=0.025974;ClusterMaxEditDist=0.0263158;PBcalls=10;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-76;DistBack=43005;DistForward=-60;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=9:135296998-135297089;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4259.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:30:1/1:0:14:1:12:./.:0:0:0:0:1/1:0:47:./.:.:.:.:.:.
chr9	135956620	HG3_Ill_250bpfermikitraw_14025	AGTGAATATCCTGGAGCACAAAGGGCATGTCTCCCAGTTCAGAATTACCTCCTTTATTTAGGGCAGGTTCTCAGAACTAGAGTAGCCGG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_10635:HG3_Ill_GATKHCSBGrefine_7178:HG3_Ill_250bpfermikitraw_14025:HG2_Ill_SpiralSDKrefine_18204:HG2_Ill_GATKHCSBGrefine_7258:HG2_Ill_250bpfermikitraw_14410;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14410:HG2_Ill_GATKHCSBGrefine_7258:HG2_Ill_SpiralSDKrefine_18204:HG3_Ill_250bpfermikitraw_14025:HG3_Ill_GATKHCSBGrefine_7178;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0112994;ClusterMaxSizeDiff=0.0112994;ClusterMaxEditDist=0.0112994;PBcalls=1;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-88;DistBack=9665;DistForward=-87;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=9:135956621-135956709;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:58:20:./.:42:19:16:1:./.:0:0:0:0:0/1:60:11:./.:.:.:.:.:.
chr9	136060715	HG3_10X_allpass_2143	TCCGTGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1535:HG2_Ill_Krunchall_14744:HG4_Ill_Spiral_880:HG3_Ill_Spiral_11277:HG2_PB_HySA_19348:HG2_Ill_Spiral_750:HG4_PB_HySA_15613:HG3_PB_pbsv_10376:HG3_Ill_MetaSV_5651:HG2_Ill_tnscope_1216:HG2_Ill_MetaSV_5474:HG4_PB_pbsv_10681:HG4_PB_SVrefine2PBcRDovetail_5366:HG4_PB_SVrefine2Falcon1Dovetail_6532:HG4_Ill_scalpel_9922:HG4_Ill_manta_2590:HG4_Ill_SVrefine2DISCOVARDovetail_7738:HG4_10X_allpass_2071:HG3_PB_SVrefine2PBcRDovetail_4967:HG3_PB_SVrefine2Falcon1Dovetail_6440:HG3_Ill_scalpel_10343:HG3_Ill_manta_2494:HG3_Ill_SVrefine2DISCOVARDovetail_7949:HG3_Ill_GATKHCSBGrefine_7179:HG3_10X_allpass_2143:HG2_PB_pbsv_10636:HG2_PB_SVrefine2PBcRplusDovetail_11796:HG2_PB_SVrefine2PB10Xhap12_7773:HG2_PB_SVrefine2Falcon2Bionano_5074:HG2_PB_SVrefine2Falcon1plusDovetail_12604:HG2_Ill_scalpel_10206:HG2_Ill_manta_3046:HG2_Ill_SVrefine2DISCOVARplusDovetail_13857:HG2_10X_allpass_1776:HG2_10X_SVrefine210Xhap12_7600;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7600:HG2_10X_allpass_1776:HG2_Ill_SVrefine2DISCOVARplusDovetail_13857:HG2_Ill_manta_3046:HG2_Ill_scalpel_10206:HG2_PB_SVrefine2Falcon1plusDovetail_12604:HG2_PB_SVrefine2Falcon2Bionano_5074:HG2_PB_SVrefine2PB10Xhap12_7773:HG2_PB_SVrefine2PBcRplusDovetail_11796:HG2_PB_pbsv_10636:HG3_10X_allpass_2143:HG3_Ill_GATKHCSBGrefine_7179:HG3_Ill_SVrefine2DISCOVARDovetail_7949:HG3_Ill_manta_2494:HG3_Ill_scalpel_10343:HG3_PB_SVrefine2Falcon1Dovetail_6440:HG3_PB_SVrefine2PBcRDovetail_4967:HG4_10X_allpass_2071:HG4_Ill_SVrefine2DISCOVARDovetail_7738:HG4_Ill_manta_2590:HG4_Ill_scalpel_9922:HG4_PB_SVrefine2Falcon1Dovetail_6532:HG4_PB_SVrefine2PBcRDovetail_5366:HG4_PB_pbsv_10681;NumExactMatchSVs=24;ClusterMaxShiftDist=0.00628931;ClusterMaxSizeDiff=0.00628931;ClusterMaxEditDist=0.00630915;PBcalls=13;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-318;DistForward=-305;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=9:136060716-136061045;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:39:1/1:2:15:1:18:./.:0:0:0:0:1/1:0:22:0/1:2:8:.:.:.
chr9	136377221	HG3_Ill_Krunchall_14471	CATGTATGTGTGGTGTATGGAGTGTGTATATGTGTGCACGTGCATGTGTGT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13555:HG4_Ill_svaba_13476:HG3_Ill_svaba_13547:HG2_Ill_svaba_13389:HG4_PB_assemblyticsfalcon_27687:HG4_Ill_GATKHC_17303:HG4_Ill_GATKHCSBGrefine_7413:HG3_Ill_GATKHC_17210:HG3_Ill_GATKHCSBGrefine_7183:HG2_PB_assemblyticsfalcon_28269:HG2_PB_assemblyticsPBcR_27526:HG2_Ill_GATKHC_17262:HG2_Ill_GATKHCSBGrefine_7260:HG3_PB_assemblyticsfalcon_28196:HG3_PB_HySA_16117:HG2_PB_HySA_19358:HG4_Ill_scalpel_9924:HG4_Ill_Krunchall_15020:HG4_Ill_250bpfermikitraw_14301:HG4_Ill_150bpfermikitraw_13709:HG3_Ill_scalpel_10347:HG3_Ill_Krunchall_14471:HG3_Ill_250bpfermikitraw_14036:HG3_Ill_150bpfermikitraw_13590:HG2_PB_pbsv_10643:HG2_Ill_scalpel_10209:HG2_Ill_SpiralSDKrefine_18212:HG2_Ill_Krunchall_14754:HG2_Ill_250bpfermikitraw_14422;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13555:HG4_Ill_scalpel_9924:HG4_Ill_Krunchall_15020:HG4_Ill_250bpfermikitraw_14301:HG4_Ill_150bpfermikitraw_13709:HG3_Ill_scalpel_10347:HG3_Ill_Krunchall_14471:HG3_Ill_250bpfermikitraw_14036:HG3_Ill_150bpfermikitraw_13590:HG2_PB_pbsv_10643:HG2_Ill_scalpel_10209:HG2_Ill_SpiralSDKrefine_18212:HG2_Ill_Krunchall_14754:HG2_Ill_250bpfermikitraw_14422;NumExactMatchSVs=14;ClusterMaxShiftDist=0.10101;ClusterMaxSizeDiff=0.10101;ClusterMaxEditDist=0.141414;PBcalls=7;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=31849;DistForward=1938;DistMin=1938;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=9:136377220-136377276;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:31:1/1:3:12:0:11:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr9	136379210	HG3_Ill_manta_2497	TAAGCAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_allpass_1777:HG4_PB_assemblyticsfalcon_27688:HG2_PB_assemblyticsfalcon_28270:HG3_PB_assemblyticsfalcon_28197:HG2_PB_assemblyticsPBcR_27527:HG4_Ill_Krunchall_15021:HG3_Ill_Krunchall_14472:HG2_Ill_Krunchall_14755:HG4_Ill_Spiral_881:HG2_Ill_Spiral_751:HG3_PB_pbsv_10385:HG3_PB_HySA_16118:HG4_PB_HySA_15618:HG4_Ill_MetaSV_5720:HG3_Ill_MetaSV_5653:HG2_PB_HySA_19359:HG2_Ill_tnscope_1218:HG2_Ill_MetaSV_5476:HG4_PB_pbsv_10690:HG4_PB_SVrefine2PBcRDovetail_5373:HG4_PB_SVrefine2Falcon1Dovetail_6538:HG4_Ill_svaba_13477:HG4_Ill_scalpel_9925:HG4_Ill_SVrefine2DISCOVARDovetail_7740:HG4_Ill_GATKHCSBGrefine_7414:HG4_10X_allpass_2072:HG3_PB_SVrefine2PBcRDovetail_4972:HG3_PB_SVrefine2Falcon1Dovetail_6446:HG3_Ill_svaba_13548:HG3_Ill_scalpel_10348:HG3_Ill_manta_2497:HG3_Ill_SVrefine2DISCOVARDovetail_7951:HG3_Ill_GATKHCSBGrefine_7184:HG3_Ill_150bpfermikitraw_13591:HG3_10X_allpass_2144:HG2_PB_pbsv_10644:HG2_PB_SVrefine2PBcRplusDovetail_11801:HG2_PB_SVrefine2PB10Xhap12_7779:HG2_PB_SVrefine2Falcon2Bionano_5080:HG2_PB_SVrefine2Falcon1plusDovetail_12610:HG2_Ill_svaba_13390:HG2_Ill_scalpel_10210:HG2_Ill_manta_3048:HG2_Ill_breakscan11_1537:HG2_Ill_SVrefine2DISCOVARplusDovetail_13860:HG2_Ill_GATKHCSBGrefine_7261;NumClusterSVs=46;ExactMatchIDs=HG2_10X_allpass_1777:HG4_PB_pbsv_10690:HG4_PB_SVrefine2PBcRDovetail_5373:HG4_PB_SVrefine2Falcon1Dovetail_6538:HG4_Ill_svaba_13477:HG4_Ill_scalpel_9925:HG4_Ill_SVrefine2DISCOVARDovetail_7740:HG4_Ill_GATKHCSBGrefine_7414:HG4_10X_allpass_2072:HG3_PB_SVrefine2PBcRDovetail_4972:HG3_PB_SVrefine2Falcon1Dovetail_6446:HG3_Ill_svaba_13548:HG3_Ill_scalpel_10348:HG3_Ill_manta_2497:HG3_Ill_SVrefine2DISCOVARDovetail_7951:HG3_Ill_GATKHCSBGrefine_7184:HG3_Ill_150bpfermikitraw_13591:HG3_10X_allpass_2144:HG2_PB_pbsv_10644:HG2_PB_SVrefine2PBcRplusDovetail_11801:HG2_PB_SVrefine2PB10Xhap12_7779:HG2_PB_SVrefine2Falcon2Bionano_5080:HG2_PB_SVrefine2Falcon1plusDovetail_12610:HG2_Ill_svaba_13390:HG2_Ill_scalpel_10210:HG2_Ill_manta_3048:HG2_Ill_breakscan11_1537:HG2_Ill_SVrefine2DISCOVARplusDovetail_13860:HG2_Ill_GATKHCSBGrefine_7261;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0681482;ClusterMaxSizeDiff=0.0681482;ClusterMaxEditDist=0.0681482;PBcalls=18;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-342;DistBack=1938;DistForward=25222;DistMin=1938;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=9:136379211-136379564;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:38:1/1:0:18:0:12:./.:0:0:0:0:1/1:0:29:./.:2:12:.:.:.
chr9	136414101	HG2_10X_allpass_1778	TCACAGTTTCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1538:HG4_PB_HySA_15620:HG3_PB_SVrefine2Falcon1Dovetail_6447:HG4_PB_pbsv_10692:HG3_PB_HySA_16120:HG2_PB_HySA_19362:HG4_Ill_MetaSV_5721:HG3_Ill_MetaSV_5654:HG2_Ill_tnscope_1219:HG2_Ill_MetaSV_5477:HG4_PB_SVrefine2PBcRDovetail_5374:HG4_PB_SVrefine2Falcon1Dovetail_6539:HG4_Ill_svaba_13479:HG4_Ill_scalpel_9927:HG4_Ill_manta_2592:HG4_Ill_SVrefine2DISCOVARDovetail_7741:HG4_Ill_GATKHCSBGrefine_7416:HG3_PB_pbsv_10386:HG3_PB_SVrefine2PBcRDovetail_4973:HG3_Ill_svaba_13550:HG3_Ill_scalpel_10350:HG3_Ill_manta_2498:HG3_Ill_SVrefine2DISCOVARDovetail_7952:HG3_Ill_GATKHCSBGrefine_7186:HG3_10X_allpass_2145:HG2_PB_pbsv_10646:HG2_PB_SVrefine2PBcRplusDovetail_11802:HG2_PB_SVrefine2PB10Xhap12_7780:HG2_PB_SVrefine2Falcon2Bionano_5081:HG2_PB_SVrefine2Falcon1plusDovetail_12611:HG2_Ill_svaba_13392:HG2_Ill_scalpel_10212:HG2_Ill_manta_3049:HG2_Ill_SVrefine2DISCOVARplusDovetail_13861:HG2_Ill_GATKHCSBGrefine_7263:HG2_10X_allpass_1778;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_1778:HG2_Ill_GATKHCSBGrefine_7263:HG2_Ill_SVrefine2DISCOVARplusDovetail_13861:HG2_Ill_manta_3049:HG2_Ill_scalpel_10212:HG2_Ill_svaba_13392:HG2_PB_SVrefine2Falcon1plusDovetail_12611:HG2_PB_SVrefine2Falcon2Bionano_5081:HG2_PB_SVrefine2PB10Xhap12_7780:HG2_PB_SVrefine2PBcRplusDovetail_11802:HG2_PB_pbsv_10646:HG3_10X_allpass_2145:HG3_Ill_GATKHCSBGrefine_7186:HG3_Ill_SVrefine2DISCOVARDovetail_7952:HG3_Ill_manta_2498:HG3_Ill_scalpel_10350:HG3_Ill_svaba_13550:HG3_PB_SVrefine2PBcRDovetail_4973:HG3_PB_pbsv_10386:HG4_Ill_GATKHCSBGrefine_7416:HG4_Ill_SVrefine2DISCOVARDovetail_7741:HG4_Ill_manta_2592:HG4_Ill_scalpel_9927:HG4_Ill_svaba_13479:HG4_PB_SVrefine2Falcon1Dovetail_6539:HG4_PB_SVrefine2PBcRDovetail_5374;NumExactMatchSVs=26;ClusterMaxShiftDist=0.015361;ClusterMaxSizeDiff=0.015361;ClusterMaxEditDist=0.0215054;PBcalls=14;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=-123;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=9:136414102-136414440;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:0:28:0:21:./.:0:0:0:0:1/1:0:23:./.:3:5:.:.:.
chr9	136843047	HG2_Ill_GATKHCSBGrefine_7267	GGGGCACGCAGCTCCCACGCCCCCTGCCTCTGGAGATGTCCTACGTGTATGCGTCCACCTGCCCTA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13865:HG2_PB_HySA_19374:HG2_PB_pbsv_10656:HG4_Ill_svaba_13494:HG4_Ill_Krunchall_15029:HG4_Ill_GATKHC_17316:HG4_Ill_GATKHCSBGrefine_7425:HG4_Ill_250bpfermikitraw_14310:HG4_Ill_150bpfermikitraw_13718:HG4_10X_allpass_2076:HG2_Ill_svaba_13406:HG2_Ill_scalpel_10217:HG2_Ill_manta_3050:HG2_Ill_SpiralSDKrefine_18219:HG2_Ill_Krunchall_14765:HG2_Ill_GATKHC_17273:HG2_Ill_GATKHCSBGrefine_7267:HG2_Ill_250bpfermikitraw_14432:HG4_PB_pbsv_10701:HG4_Ill_SVrefine2DISCOVARDovetail_7746:HG2_PB_SVrefine2PBcRplusDovetail_11809:HG2_PB_SVrefine2PB10Xhap12_7788:HG2_PB_SVrefine2Falcon2Bionano_5088;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14432:HG2_Ill_GATKHCSBGrefine_7267:HG2_Ill_GATKHC_17273:HG2_Ill_Krunchall_14765:HG2_Ill_SpiralSDKrefine_18219:HG2_Ill_manta_3050:HG2_Ill_scalpel_10217:HG2_Ill_svaba_13406:HG4_10X_allpass_2076:HG4_Ill_150bpfermikitraw_13718:HG4_Ill_250bpfermikitraw_14310:HG4_Ill_GATKHCSBGrefine_7425:HG4_Ill_GATKHC_17316:HG4_Ill_Krunchall_15029:HG4_Ill_svaba_13494;NumExactMatchSVs=15;ClusterMaxShiftDist=0.030303;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.0461538;PBcalls=6;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-65;DistBack=13876;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=66;REFWIDENED=9:136843032-136843162;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:36:0|1:24:1:1:32:./.:0:0:0:0:0/1:23:23:./.:.:.:.:.:.
chr9	137187576	HG2_Ill_SpiralSDKrefine_18222	GTCCCCTCTATCTCCACCGGCCTCCAGCTCTCCTCTATCTCCGCCGGCCTCCAGCTCCCCTCTATCTCCACCGGCCTCCAGC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5097:HG2_PB_HySA_19396:HG3_PB_pbsv_10409:HG2_PB_pbsv_10667:HG2_PB_PB10Xdip_30899:HG2_PB_PB10Xdip_30898:HG3_Ill_svaba_13565:HG3_Ill_Krunchall_14483:HG3_Ill_GATKHC_17226:HG3_Ill_GATKHCSBGrefine_7194:HG3_Ill_250bpfermikitraw_14050:HG2_Ill_svaba_13414:HG2_Ill_SpiralSDKrefine_18222:HG2_Ill_Krunchall_14771:HG2_Ill_GATKHC_17282:HG2_Ill_GATKHCSBGrefine_7268:HG2_Ill_250bpfermikitraw_14438:HG2_PB_HySA_19395:HG3_Ill_SVrefine2DISCOVARDovetail_7957:HG2_PB_SVrefine2PBcRplusDovetail_11818:HG2_PB_SVrefine2PB10Xhap12_7799;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14438:HG2_Ill_GATKHCSBGrefine_7268:HG2_Ill_GATKHC_17282:HG2_Ill_Krunchall_14771:HG2_Ill_SpiralSDKrefine_18222:HG2_Ill_svaba_13414:HG3_Ill_250bpfermikitraw_14050:HG3_Ill_GATKHCSBGrefine_7194:HG3_Ill_GATKHC_17226:HG3_Ill_Krunchall_14483:HG3_Ill_svaba_13565;NumExactMatchSVs=11;ClusterMaxShiftDist=0.106509;ClusterMaxSizeDiff=0.106509;ClusterMaxEditDist=0.152047;PBcalls=9;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-81;DistBack=-55;DistForward=-67;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=124;REFWIDENED=9:137187506-137187710;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:0|1:23:2:1:25:./.:0:0:0:0:0/1:16:14:./.:.:.:.:.:.
chr9	137684686	HG4_Ill_scalpel_9940	TGTGTGTGTGCGCACACGTGTGTGTGCGCGCGTTTGTGCACACGTGTGTGTGCGCGCGTGTGTGCACGCGC	T	20	PASS	ClusterIDs=HG2_10X_allpass_1780:HG4_Ill_GATKHC_17335:HG4_Ill_GATKHCSBGrefine_7436:HG3_Ill_GATKHC_17235:HG3_Ill_GATKHCSBGrefine_7202:HG2_Ill_GATKHC_17293:HG2_Ill_GATKHCSBGrefine_7274:HG4_Ill_manta_2594:HG2_Ill_manta_3053:HG2_PB_pbsv_10688:HG2_PB_PB10Xdip_30939:HG3_PB_pbsv_10432:HG4_PB_pbsv_10732:HG2_Ill_SpiralSDKrefine_18225:HG4_Ill_svaba_13510:HG4_Ill_scalpel_9940:HG4_Ill_Krunchall_15037:HG4_Ill_250bpfermikitraw_14323:HG4_Ill_150bpfermikitraw_13728:HG4_10X_allpass_2077:HG3_Ill_svaba_13573:HG3_Ill_scalpel_10362:HG3_Ill_Krunchall_14489:HG3_Ill_250bpfermikitraw_14059:HG3_Ill_150bpfermikitraw_13610:HG3_10X_allpass_2150:HG2_Ill_svaba_13422:HG2_Ill_Krunchall_14776:HG2_Ill_250bpfermikitraw_14444:HG2_Ill_150bpfermikitraw_13572;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_1780:HG4_Ill_svaba_13510:HG4_Ill_scalpel_9940:HG4_Ill_Krunchall_15037:HG4_Ill_250bpfermikitraw_14323:HG4_Ill_150bpfermikitraw_13728:HG4_10X_allpass_2077:HG3_Ill_svaba_13573:HG3_Ill_scalpel_10362:HG3_Ill_Krunchall_14489:HG3_Ill_250bpfermikitraw_14059:HG3_Ill_150bpfermikitraw_13610:HG3_10X_allpass_2150:HG2_Ill_svaba_13422:HG2_Ill_Krunchall_14776:HG2_Ill_250bpfermikitraw_14444:HG2_Ill_150bpfermikitraw_13572;NumExactMatchSVs=17;ClusterMaxShiftDist=0.20155;ClusterMaxSizeDiff=0.20155;ClusterMaxEditDist=0.246377;PBcalls=4;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-70;DistBack=2346;DistForward=4023;DistMin=2346;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=9:137684687-137684769;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:22:0|1:21:2:0:16:./.:0:0:0:0:0/1:31:18:./.:.:.:.:.:.
chr9	137690415	HG4_Ill_Krunchall_15039	AGAGACAGGTTGGCCTCAGAAAGGCTCCCAAGGGCCGGGCCGGCTTCCGCTGACTCAGAGCCAGGCTGTGAGGCAGGGCCAGGGC	A	20	PASS	ClusterIDs=HG2_CG_vcfBeta_6132:HG3_PB_HySA_16192:HG4_PB_pbsv_10733:HG4_PB_assemblyticsfalcon_27742:HG4_Ill_svaba_13512:HG4_Ill_manta_2595:HG4_Ill_Krunchall_15039:HG4_Ill_GATKHC_17337:HG4_Ill_GATKHCSBGrefine_7437:HG4_Ill_Cortex_3892:HG4_Ill_250bpfermikitraw_14325:HG4_Ill_150bpfermikitraw_13730:HG4_CG_vcfBeta_6894:HG4_10X_allpass_2078:HG3_PB_pbsv_10433:HG3_PB_assemblyticsfalcon_28249:HG3_Ill_svaba_13575:HG3_Ill_scalpel_10363:HG3_Ill_Krunchall_14491:HG3_Ill_GATKHC_17237:HG3_Ill_GATKHCSBGrefine_7203:HG3_Ill_Cortex_3932:HG3_Ill_250bpfermikitraw_14061:HG3_Ill_150bpfermikitraw_13612:HG3_CG_vcfBeta_5819:HG2_PB_pbsv_10689:HG2_PB_assemblyticsfalcon_28317:HG2_PB_assemblyticsPBcR_27572:HG2_Ill_svaba_13424:HG2_Ill_breakscan11_1546:HG2_Ill_SpiralSDKrefine_18227:HG2_Ill_Krunchall_14778:HG2_Ill_GATKHC_17295:HG2_Ill_GATKHCSBGrefine_7275:HG2_Ill_Cortex_9505:HG2_Ill_250bpfermikitraw_14446:HG2_Ill_150bpfermikitraw_13574;NumClusterSVs=37;ExactMatchIDs=HG2_CG_vcfBeta_6132:HG4_PB_pbsv_10733:HG4_PB_assemblyticsfalcon_27742:HG4_Ill_svaba_13512:HG4_Ill_manta_2595:HG4_Ill_Krunchall_15039:HG4_Ill_GATKHC_17337:HG4_Ill_GATKHCSBGrefine_7437:HG4_Ill_Cortex_3892:HG4_Ill_250bpfermikitraw_14325:HG4_Ill_150bpfermikitraw_13730:HG4_CG_vcfBeta_6894:HG4_10X_allpass_2078:HG3_PB_pbsv_10433:HG3_PB_assemblyticsfalcon_28249:HG3_Ill_svaba_13575:HG3_Ill_scalpel_10363:HG3_Ill_Krunchall_14491:HG3_Ill_GATKHC_17237:HG3_Ill_GATKHCSBGrefine_7203:HG3_Ill_Cortex_3932:HG3_Ill_250bpfermikitraw_14061:HG3_Ill_150bpfermikitraw_13612:HG3_CG_vcfBeta_5819:HG2_PB_pbsv_10689:HG2_PB_assemblyticsfalcon_28317:HG2_PB_assemblyticsPBcR_27572:HG2_Ill_svaba_13424:HG2_Ill_breakscan11_1546:HG2_Ill_SpiralSDKrefine_18227:HG2_Ill_Krunchall_14778:HG2_Ill_GATKHC_17295:HG2_Ill_GATKHCSBGrefine_7275:HG2_Ill_Cortex_9505:HG2_Ill_250bpfermikitraw_14446:HG2_Ill_150bpfermikitraw_13574;NumExactMatchSVs=36;ClusterMaxShiftDist=0.152174;ClusterMaxSizeDiff=0.152174;ClusterMaxEditDist=0.152174;PBcalls=8;Illcalls=25;TenXcalls=1;CGcalls=3;PBexactcalls=7;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=3;HG2count=13;HG3count=12;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-84;DistBack=1614;DistForward=-81;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=9:137690414-137690500;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4270.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:30:./.:26:9:6:19:./.:0:0:0:0:0/1:35:25:./.:.:.:.:.:.
chr9	138092684	HG4_Ill_GATKHCSBGrefine_7444	ACTCTGGTTCACAAGCGGGCAACCCACTCTTGGAGAACCCAGATCCGCAGGTAGCCCCCAC	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_14458:HG2_PB_assemblyticsPBcR_27581:HG4_PB_pbsv_10747:HG2_PB_pbsv_10701:HG3_PB_pbsv_10443:HG4_PB_assemblyticsfalcon_27758:HG4_Ill_GATKHCSBGrefine_7444:HG3_PB_HySA_16201:HG3_Ill_GATKHCSBGrefine_7206:HG3_Ill_250bpfermikitraw_14071:HG3_Ill_150bpfermikitraw_13623:HG2_Ill_GATKHCSBGrefine_7287;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14458:HG4_PB_assemblyticsfalcon_27758:HG4_Ill_GATKHCSBGrefine_7444:HG3_PB_HySA_16201:HG3_Ill_GATKHCSBGrefine_7206:HG3_Ill_250bpfermikitraw_14071:HG3_Ill_150bpfermikitraw_13623:HG2_Ill_GATKHCSBGrefine_7287;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0672269;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=-55;DistForward=1292;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=235;REFWIDENED=9:138092642-138092936;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4272.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:12:0|1:20:4:2:8:./.:0:0:0:0:0/1:13:5:./.:.:.:.:.:.
chr9	138156673	HG2_PB_SVrefine2PB10Xhap12_7821	CCTGACCCCTCGCTGTGGACAGGCGTGGGTGCCATGAACGCCGCAGCTGATCCCTCGCTGTGGACAGGCGTGGGTGCCATGAACGCCGCAG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13879:HG4_PB_SVrefine2Falcon1Dovetail_6577:HG4_PB_assemblyticsfalcon_27762:HG2_PB_HySA_19453:HG4_PB_pbsv_10751:HG3_PB_pbsv_10446:HG2_PB_pbsv_10705:HG4_PB_SVrefine2PBcRDovetail_5399:HG4_PB_HySA_15692:HG4_Ill_SVrefine2DISCOVARDovetail_7761:HG4_Ill_250bpfermikitraw_14345:HG2_PB_SVrefine2PBcRplusDovetail_11838:HG2_PB_SVrefine2PB10Xhap12_7821:HG2_PB_SVrefine2Falcon1plusDovetail_12646;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13879:HG4_PB_SVrefine2PBcRDovetail_5399:HG4_PB_HySA_15692:HG4_Ill_SVrefine2DISCOVARDovetail_7761:HG4_Ill_250bpfermikitraw_14345:HG2_PB_SVrefine2PBcRplusDovetail_11838:HG2_PB_SVrefine2PB10Xhap12_7821:HG2_PB_SVrefine2Falcon1plusDovetail_12646;NumExactMatchSVs=8;ClusterMaxShiftDist=0.021978;ClusterMaxSizeDiff=0.021978;ClusterMaxEditDist=0.0879121;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-90;DistBack=2702;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=301;REFWIDENED=9:138156674-138157064;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4273.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:10:45:1/1:5:16:4:20:./.:0:0:0:0:./.:0:7:./.:.:.:.:.:.
chr9	138172255	HG2_PB_assemblyticsPBcR_27589	GGGAGGCTCTGTACCATGTGGCTGGCCATACCCTGGGCTCTGTTGGCGAGGTCTGACCAC	G	20	PASS	ClusterIDs=HG4_PB_HySA_15693:HG3_PB_pbsv_10447:HG4_PB_assemblyticsfalcon_27763:HG3_PB_HySA_16206:HG2_PB_HySA_19454:HG4_Ill_Spiral_883:HG2_PB_pbsv_10706:HG4_PB_pbsv_10752:HG4_Ill_svaba_13531:HG4_Ill_scalpel_9952:HG4_Ill_manta_2600:HG4_Ill_Krunchall_15056:HG4_Ill_GATKHC_17357:HG4_Ill_GATKHCSBGrefine_7449:HG4_Ill_250bpfermikitraw_14348:HG4_Ill_150bpfermikitraw_13746:HG3_PB_assemblyticsfalcon_28269:HG3_Ill_svaba_13592:HG3_Ill_scalpel_10375:HG3_Ill_Krunchall_14502:HG3_Ill_GATKHC_17256:HG3_Ill_GATKHCSBGrefine_7208:HG3_Ill_250bpfermikitraw_14075:HG2_PB_assemblyticsfalcon_28333:HG2_PB_assemblyticsPBcR_27589:HG2_Ill_svaba_13444:HG2_Ill_scalpel_10235:HG2_Ill_manta_3057:HG2_Ill_Krunchall_14795:HG2_Ill_GATKHC_17319:HG2_Ill_GATKHCSBGrefine_7289:HG2_Ill_250bpfermikitraw_14466:HG2_Ill_150bpfermikitraw_13590;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13590:HG2_Ill_250bpfermikitraw_14466:HG2_Ill_GATKHCSBGrefine_7289:HG2_Ill_GATKHC_17319:HG2_Ill_Krunchall_14795:HG2_Ill_manta_3057:HG2_Ill_scalpel_10235:HG2_Ill_svaba_13444:HG2_PB_assemblyticsPBcR_27589:HG2_PB_assemblyticsfalcon_28333:HG3_Ill_250bpfermikitraw_14075:HG3_Ill_GATKHCSBGrefine_7208:HG3_Ill_GATKHC_17256:HG3_Ill_Krunchall_14502:HG3_Ill_scalpel_10375:HG3_Ill_svaba_13592:HG3_PB_assemblyticsfalcon_28269:HG4_Ill_150bpfermikitraw_13746:HG4_Ill_250bpfermikitraw_14348:HG4_Ill_GATKHCSBGrefine_7449:HG4_Ill_GATKHC_17357:HG4_Ill_Krunchall_15056:HG4_Ill_manta_2600:HG4_Ill_scalpel_9952:HG4_Ill_svaba_13531;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.0683761;PBcalls=10;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=3698;DistForward=5746;DistMin=3698;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=59;REFWIDENED=9:138172256-138172373;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4274.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:50:1/1:1:20:0:26:./.:0:0:0:0:1/1:0:34:./.:.:.:.:.:.
chr9	138289773	HG3_PB_SVrefine2Falcon1Dovetail_6489	GTCCGTGGAATGCTGCAGGCCAGGCGCTGGGTCACACTCTTCACACGGATTATCTCGTGTGACACCTGGCCCACACCCGTCCGTGGAATGCTGCAGGCCAGGCGCTGGGTTACACTCTTCACGCGGATTATCTCGTGTGACACCTGGCCCACACCCA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7826:HG3_PB_HySA_16212:HG4_PB_SVrefine2Falcon1Dovetail_6582:HG4_PB_assemblyticsfalcon_27769:HG3_PB_assemblyticsfalcon_28277:HG3_PB_SVrefine2PBcRDovetail_5007:HG3_PB_SVrefine2Falcon1Dovetail_6489:HG2_PB_SVrefine2Falcon2Bionano_5119:HG2_PB_SVrefine2Falcon1plusDovetail_12651:HG3_PB_HySA_16213:HG3_PB_pbsv_10454:HG2_PB_pbsv_10712;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12651:HG2_PB_SVrefine2Falcon2Bionano_5119:HG3_PB_SVrefine2Falcon1Dovetail_6489:HG3_PB_SVrefine2PBcRDovetail_5007;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0191693;ClusterMaxSizeDiff=0.0191693;ClusterMaxEditDist=0.254777;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-156;DistBack=9;DistForward=-156;DistMin=-156;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=391;REFWIDENED=9:138289444-138289990;PctSeqSimilarity=0.9726;PctSizeSimilarity=1;PctRecOverlap=0.5414;SizeDiff=0;StartDistance=72;EndDistance=72;GTMatch=0;TruScore=83;MatchId=4275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:21:0|1:36:1:1:21:./.:0:0:0:0:0/1:33:9:./.:.:.:.:.:.
chr9	138562333	HG3_Ill_150bpfermikitraw_13635	ACGGGGGAGGAGAGAGTTCTGGCCCCCCCATCAGCCTCTCTCGCTTCTGCAGCTCTC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7606:HG4_PB_HySA_15706:HG4_PB_pbsv_10765:HG4_PB_SVrefine2PBcRDovetail_5408:HG4_PB_SVrefine2Falcon1Dovetail_6587:HG4_Ill_svaba_13547:HG4_Ill_scalpel_9963:HG4_Ill_manta_2604:HG4_Ill_SVrefine2DISCOVARDovetail_7769:HG4_Ill_Krunchall_15071:HG4_Ill_GATKHC_17369:HG4_Ill_GATKHCSBGrefine_7459:HG4_Ill_Cortex_3900:HG4_Ill_250bpfermikitraw_14360:HG4_Ill_150bpfermikitraw_13754:HG3_PB_pbsv_10463:HG3_PB_SVrefine2Falcon1Dovetail_6500:HG3_PB_HySA_16220:HG3_Ill_svaba_13605:HG3_Ill_scalpel_10382:HG3_Ill_SVrefine2DISCOVARDovetail_7974:HG3_Ill_Krunchall_14516:HG3_Ill_GATKHC_17270:HG3_Ill_GATKHCSBGrefine_7214:HG3_Ill_Cortex_3939:HG3_Ill_250bpfermikitraw_14087:HG3_Ill_150bpfermikitraw_13635:HG2_PB_pbsv_10720:HG2_PB_SVrefine2Falcon2Bionano_5125:HG2_PB_HySA_19470:HG2_Ill_svaba_13456:HG2_Ill_scalpel_10242:HG2_Ill_manta_3059:HG2_Ill_breakscan11_1551:HG2_Ill_SpiralSDKrefine_18241:HG2_Ill_SVrefine2DISCOVARplusDovetail_13887:HG2_Ill_Krunchall_14804:HG2_Ill_GATKHC_17329:HG2_Ill_GATKHCSBGrefine_7296:HG2_Ill_Cortex_9517:HG2_Ill_250bpfermikitraw_14474:HG2_Ill_150bpfermikitraw_13597;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7606:HG4_PB_pbsv_10765:HG4_PB_SVrefine2PBcRDovetail_5408:HG4_PB_SVrefine2Falcon1Dovetail_6587:HG4_Ill_svaba_13547:HG4_Ill_scalpel_9963:HG4_Ill_manta_2604:HG4_Ill_SVrefine2DISCOVARDovetail_7769:HG4_Ill_Krunchall_15071:HG4_Ill_GATKHC_17369:HG4_Ill_GATKHCSBGrefine_7459:HG4_Ill_Cortex_3900:HG4_Ill_250bpfermikitraw_14360:HG4_Ill_150bpfermikitraw_13754:HG3_PB_pbsv_10463:HG3_PB_SVrefine2Falcon1Dovetail_6500:HG3_PB_HySA_16220:HG3_Ill_svaba_13605:HG3_Ill_scalpel_10382:HG3_Ill_SVrefine2DISCOVARDovetail_7974:HG3_Ill_Krunchall_14516:HG3_Ill_GATKHC_17270:HG3_Ill_GATKHCSBGrefine_7214:HG3_Ill_Cortex_3939:HG3_Ill_250bpfermikitraw_14087:HG3_Ill_150bpfermikitraw_13635:HG2_PB_pbsv_10720:HG2_PB_SVrefine2Falcon2Bionano_5125:HG2_PB_HySA_19470:HG2_Ill_svaba_13456:HG2_Ill_scalpel_10242:HG2_Ill_manta_3059:HG2_Ill_breakscan11_1551:HG2_Ill_SpiralSDKrefine_18241:HG2_Ill_SVrefine2DISCOVARplusDovetail_13887:HG2_Ill_Krunchall_14804:HG2_Ill_GATKHC_17329:HG2_Ill_GATKHCSBGrefine_7296:HG2_Ill_Cortex_9517:HG2_Ill_250bpfermikitraw_14474:HG2_Ill_150bpfermikitraw_13597;NumExactMatchSVs=41;ClusterMaxShiftDist=0.0173913;ClusterMaxSizeDiff=0.0173913;ClusterMaxEditDist=0.0173913;PBcalls=10;Illcalls=31;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=31;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=6635;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=59;REFWIDENED=9:138562334-138562448;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4276.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:21:0|1:23:4:0:16:./.:0:0:0:0:0/1:23:27:./.:.:.:.:.:.
chr9	139427525	HG2_PB_SVrefine2Falcon1plusDovetail_12672	CCGCCACCATGTGGACCCTGGACACTCAGCCCCGCCCGGCCTCCCCACCTGGCTCTCCGTCAGACAGGAATGAGGCCAGCCTCCTTCTGACCACTGAAGGGGAAGTAGGAGGGGCCACCCAGGGGCTGCACCCCGGGAGCTGGGACCAACCCAGGTCCCTCTATAAGGATGGAGAGTGGAGGCCCAAGGGGGGGACTCTGGCCCAGCCCCCTCCGCGCACCAGCCAGTGCCCAGCCTGAGCTCAAGCATCTCTTACTGAAAAGCCGTCAGG	GTGAACAT	20	PASS	ClusterIDs=HG3_PB_pbsv_10489:HG2_PB_HySA_19522:HG2_Ill_tnscope_1223:HG4_PB_assemblyticsfalcon_27813:HG4_PB_SVrefine2PBcRDovetail_5420:HG4_PB_SVrefine2Falcon1Dovetail_6603:HG4_Ill_manta_2607:HG4_Ill_SVrefine2DISCOVARDovetail_7775:HG4_Ill_Cortex_3905:HG3_PB_assemblyticsfalcon_28318:HG3_PB_SVrefine2PBcRDovetail_5026:HG3_PB_SVrefine2Falcon1Dovetail_6517:HG3_Ill_manta_2505:HG3_Ill_Cortex_3943:HG2_PB_assemblyticsfalcon_28382:HG2_PB_assemblyticsPBcR_27639:HG2_PB_SVrefine2PBcRplusDovetail_11867:HG2_PB_SVrefine2PB10Xhap12_7857:HG2_PB_SVrefine2Falcon2Bionano_5143:HG2_PB_SVrefine2Falcon1plusDovetail_12672:HG2_PB_PB10Xdip_31001:HG2_Ill_manta_3061:HG2_Ill_SVrefine2DISCOVARplusDovetail_13891:HG2_Ill_Cortex_9527:HG2_10X_SVrefine210Xhap12_7610:HG2_Ill_SpiralSDKrefine_18254:HG4_Ill_MetaSV_5740:HG3_Ill_MetaSV_5667:HG2_Ill_MetaSV_5490:HG4_Ill_Spiral_884:HG3_Ill_Spiral_11329:HG2_Ill_Spiral_754:HG3_10X_allpass_2157:HG2_10X_allpass_1785:HG3_Ill_scalpel_10391:HG2_Ill_scalpel_10253:HG4_PB_assemblyticsfalcon_27812:HG4_Ill_Krunchall_15084:HG3_Ill_Krunchall_14527:HG4_PB_pbsv_10792:HG2_PB_pbsv_10748;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7610:HG2_Ill_Cortex_9527:HG2_Ill_SVrefine2DISCOVARplusDovetail_13891:HG2_Ill_manta_3061:HG2_PB_PB10Xdip_31001:HG2_PB_SVrefine2Falcon1plusDovetail_12672:HG2_PB_SVrefine2Falcon2Bionano_5143:HG2_PB_SVrefine2PB10Xhap12_7857:HG2_PB_SVrefine2PBcRplusDovetail_11867:HG2_PB_assemblyticsPBcR_27639:HG2_PB_assemblyticsfalcon_28382:HG3_Ill_Cortex_3943:HG3_Ill_manta_2505:HG3_PB_SVrefine2Falcon1Dovetail_6517:HG3_PB_SVrefine2PBcRDovetail_5026:HG3_PB_assemblyticsfalcon_28318:HG4_Ill_Cortex_3905:HG4_Ill_SVrefine2DISCOVARDovetail_7775:HG4_Ill_manta_2607:HG4_PB_SVrefine2Falcon1Dovetail_6603:HG4_PB_SVrefine2PBcRDovetail_5420:HG4_PB_assemblyticsfalcon_27813;NumExactMatchSVs=22;ClusterMaxShiftDist=0.184;ClusterMaxSizeDiff=0.184;ClusterMaxEditDist=0.184;PBcalls=18;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=13;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-263;DistBack=3059;DistForward=-259;DistMin=-259;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=9:139427525-139427795;PctSeqSimilarity=0.959;PctSizeSimilarity=0.9925;PctRecOverlap=0.9631;SizeDiff=-2;StartDistance=5;EndDistance=10;GTMatch=0;TruScore=97;MatchId=4278.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:26:1/1:0:6:1:10:./.:0:0:0:0:1/1:0:52:./.:.:.:.:3210:.
chr9	140182769	HG2_PB_SVrefine2Falcon1plusDovetail_12689	AGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12689:HG2_PB_SVrefine2Falcon2Bionano_5158:HG4_Ill_GATKHCSBGrefine_7479:HG3_Ill_GATKHC_17325:HG2_Ill_GATKHCSBGrefine_7313:HG2_PB_pbsv_10777:HG4_PB_pbsv_10821:HG3_PB_pbsv_10516:HG3_PB_SVrefine2PBcRDovetail_5040:HG2_PB_SVrefine2PB10Xhap12_7872;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12689:HG3_PB_SVrefine2PBcRDovetail_5040:HG2_PB_SVrefine2PB10Xhap12_7872;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0313726;ClusterMaxSizeDiff=0.0235294;ClusterMaxEditDist=0.0470588;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-127;DistBack=-3528;DistForward=-128;DistMin=-3528;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=200;REFWIDENED=9:140182770-140183096;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9921;PctRecOverlap=0.3906;SizeDiff=1;StartDistance=-78;EndDistance=-77;GTMatch=0;TruScore=79;MatchId=4279.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:8:23:./.:5:11:1:6:./.:0:0:0:0:./.:2:23:./.:.:.:.:.:.
chr9	140253510	HG2_PB_SVrefine2PBcRplusDovetail_11888	TGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGGTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACTGTGTTAGCCAGGATGGTTTCACTGTGTTAGCCAGGTTAGTCTCGATCTCCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCAAGGCCTACTTTTTAAGATAAACTATTTACTGAGGTATAAGTGACACACGGTAAGGTATGCCAATCATGGGTGCAAATGCACCGGTAAACCCACTGCCCAAATCTCAACATAGAACGTTCCAGGCCAGGTGCGGTGGCTCACGCCTGTAATCCCATCACCTTGGGAGGCTGAGGCAGGAGGATCGCTCGAGCCGAGGAGGTTGAGTCTGCAGTGAGCTGTGGTTGTGTCACTGCACTCCAGCCTGGGTAACAGAGTGAGACCCTGTCTCTAAAGTAAAATGTAAATAAAGGACATTCCAGCACCCCAAAGTTTCTCCCGTGTCCATCTCTGTGTATCCCCATCCCACACTTCTCTGACTTCTATGGCCAGAGATTATTTGCCCGATTTTGAACTTGATGCAAATGGAATGATAGAATAGGGACACTTTGCCACTTTTGGATCTGGCTTCTTCCATGCAGTCTCTGTCCACGCTGCTGAGTGTGACGAGGTTCAGTCTCTCACAGCTGAGTTTGTGAACCGTGATCACTGCATCCACTGCTGCTCTGGGGACTAGGGCTGCTCCCGTGTTTCACAGATGATGATTAAGCTGCCATGACTGCGATCTTTTGTGGATAATGAGCTCATTTCTCTCGGGCATATGCTAAGTGGACTCGGACAACATATGTCATAGGGTTGGCATACTTTTTTTGCTTTAGTAGAAACTGCTAAATAATTTTCTGAAGTGTCTGCACCAGTGCACATCCCACCAGCAGTGCGTGAGGGTTCTGGTTGCTCCATGTCCTTGTCACCACTTGGTATGTTCGACTTTTAAATTTTAGCCTTCCTGATGGGAGGTGGTGGTATTTCTTTGTGGCTTAATTTGCATTTCCCTGATATTAATGGTGCTTAGCAACTTTTCCTACATTGGCTATCTGGATATCCTCTTTTGTGATGTGCTTATTCAAGGCTTTTGCTCATTTAAAAACTTGGTTTGTTTTGTCTTTTATTGTTTATTTGCTTTGTAGGTTTTTTGCTTAAAAATACTCTGGATACAGTCTTTTGTAAAATATGTACTGTAAATAATCTTCTCTTGGTCTGGAAGTTGCCTTTTCACTCTCTCAATGATTTCCTTTGACGTCCAGAAGGTATTAAGTCAAATTTGTCAATCTTCTTCTGTTATTCTCTTTCTTTCATCCTTCCTTCCTTTTCTTCTTCTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTGTGTCACCCAGGCTGGTGTGCAATGGCACGATATCGGTTTACTGCAATCTCTGCCTCCCAGATTCAAGTGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGAACTACAGGCATCTGCTACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGAGATTTCACCATGTTTGCTAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCCGCCTGCCTCAACCTCCCAAAGTGCTGGGAATACAGGTGTGAGCCACCGCACCCAGCCTTTATTCTTAGTGATTTTATATCCTATTTGAGAAAGCTTTATTGCAAGTATAAAGAAATACAATTGGCTTTTATAAACTTACCTTGTAACCAGTGATCTTGCTAAATTTACTTATTAATTCTAATAATTTATCTGTAGATTTTTTGGTTTTCCTTCCCTACATATAAAAACATATCTTCTGAGAAAATGACAGTTGTTTCTTTGTACCCGGTCTTTGCACTTATTTTCCTGCCTTCCCGCCTGGCATGGGTCCTTGGTACAGTATTGAATAAAAACAGCAGTTCTCAGACATTAGGCAACAGGTGGCTCAGGGCAGTGATGCCCGAGTGATGGGAAGCGAGGCTGCCAATCGCTCCATCTTCCCTCCTGGAGAAACTTCCAGCAACATGCGAGGGAAGGGGAACCCAGGAGACACTGGGTGCTTCCCTGAGTTCGCAGAGAAGAGATGCCCAGAAAAAGAGCTGTGGAGCTCTGCAGGGAGCGCCCTTGAGAATTCGCCCAAGTAAAGAGCACCCTGCGTGTGAGGAACTCACACAAAGCAGAGGAAGGGCCACCTGAACACATTACAGGGAAAAGTTTTCAAGCCTTACAAAGAGCTGGGAACAGGATCTGCTCCCAAGACCCAGAGTTTTAAAAGCTTCCTAATTGGCGGGGCATTGACTATAGTTCTAAGAAGGCTCTTGCCTCAGAAATAGGGGAAAGTTAGGCCGGGCACTGTGGCTCATGCCTGTAATCCCAGCACTTTGGG	A	20	PASS	ClusterIDs=HG4_Ill_MetaSV_5743:HG4_PB_pbsv_10826:HG2_Ill_tnscope_1224:HG2_PB_PB10Xdip_31044:HG2_PB_assemblyticsfalcon_28427:HG2_PB_SVrefine2Falcon1plusDovetail_12698:HG2_PB_pbsv_10783:HG4_PB_SVrefine2PBcRDovetail_5434:HG4_PB_SVrefine2Falcon1Dovetail_6627:HG4_Ill_SVrefine2DISCOVARDovetail_7783:HG3_PB_SVrefine2PBcRDovetail_5043:HG2_PB_SVrefine2PBcRplusDovetail_11888:HG2_PB_SVrefine2PB10Xhap12_7875:HG2_PB_SVrefine2Falcon2Bionano_5164:HG2_Ill_SVrefine2DISCOVARplusDovetail_13898:HG2_10X_SVrefine210Xhap12_7623:HG4_10X_allpass_2085:HG3_10X_allpass_2159:HG2_10X_allpass_1787:HG3_Ill_MetaSV_5671:HG4_PB_assemblyticsfalcon_27851:HG2_PB_assemblyticsPBcR_27681:HG3_PB_pbsv_10523:HG2_PB_HySA_19580:HG2_Ill_MetaSV_5493;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7623:HG2_Ill_SVrefine2DISCOVARplusDovetail_13898:HG2_PB_SVrefine2Falcon2Bionano_5164:HG2_PB_SVrefine2PB10Xhap12_7875:HG2_PB_SVrefine2PBcRplusDovetail_11888:HG3_PB_SVrefine2PBcRDovetail_5043:HG4_Ill_SVrefine2DISCOVARDovetail_7783:HG4_PB_SVrefine2Falcon1Dovetail_6627:HG4_PB_SVrefine2PBcRDovetail_5434;NumExactMatchSVs=9;ClusterMaxShiftDist=0.178097;ClusterMaxSizeDiff=0.178097;ClusterMaxEditDist=0.178097;PBcalls=15;Illcalls=6;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2450;DistBack=3326;DistForward=7488;DistMin=3326;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=9:140253510-140255960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=4280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:95:1/1:0:17:0:26:./.:0:0:0:0:1/1:0:11:0/1:17:95:.:12107:.
chr9	140761162	HG2_Ill_GATKHC_17404	CCCCTCAACTCTCCCACCCTCAGCACAGGCTGCAGACGGGGAACCCCTCGACTCTCCCACCCTCAGCACAGGCTGCAGAG	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_14523:HG4_Ill_GATKHC_17442:HG2_Ill_GATKHC_17404:HG2_PB_assemblyticsPBcR_27695:HG2_PB_pbsv_10803:HG4_PB_pbsv_10840;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHC_17404:HG4_Ill_GATKHC_17442;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0838323;ClusterMaxSizeDiff=0.0838323;ClusterMaxEditDist=0.0963855;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-79;DistBack=-62;DistForward=7546;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=213;REFWIDENED=9:140761085-140761376;PctSeqSimilarity=0.9641;PctSizeSimilarity=0.9186;PctRecOverlap=0.4253;SizeDiff=-7;StartDistance=50;EndDistance=43;GTMatch=0;TruScore=76;MatchId=4281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:17:1|0:2:12:18:2:./.:0:0:0:0:0/0:44:0:./.:.:.:.:.:.
chr10	413833	HG4_PB_SVrefine2Falcon1Dovetail_6654	CCACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCCGCACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTGCACAGCCCCAGGTGCCTCCGACGGGGGCCCGGGAAGCCCGCGGTTGCTCTCACTGCTG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1122:HG4_Ill_Krunchall_15131:HG3_Ill_Krunchall_14559:HG2_Ill_SVrefine2DISCOVARplusDovetail_1123:HG3_PB_HySA_16352:HG3_Ill_GATKHCSBGrefine_7240:HG2_Ill_GATKHCSBGrefine_7317:HG2_PB_PB10Xdip_3484:HG2_PB_PB10Xdip_3483:HG2_PB_HySA_19632:HG2_PB_pbsv_10823:HG3_PB_pbsv_10570:HG4_PB_pbsv_10856:HG4_PB_SVrefine2Falcon1Dovetail_6654:HG4_Ill_SVrefine2DISCOVARDovetail_7796:HG3_PB_SVrefine2PBcRDovetail_5063:HG3_PB_SVrefine2Falcon1Dovetail_6572:HG3_Ill_SVrefine2DISCOVARDovetail_7995:HG3_Ill_250bpfermikitraw_14137:HG3_Ill_150bpfermikitraw_13689:HG2_PB_SVrefine2PBcRplusDovetail_960:HG2_PB_SVrefine2PB10Xhap12_7907:HG2_PB_SVrefine2Falcon2Bionano_5180:HG2_PB_SVrefine2Falcon1plusDovetail_994:HG2_10X_SVrefine210Xhap12_7649;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1122:HG4_PB_SVrefine2Falcon1Dovetail_6654:HG4_Ill_SVrefine2DISCOVARDovetail_7796:HG3_PB_SVrefine2PBcRDovetail_5063:HG3_PB_SVrefine2Falcon1Dovetail_6572:HG3_Ill_SVrefine2DISCOVARDovetail_7995:HG3_Ill_250bpfermikitraw_14137:HG3_Ill_150bpfermikitraw_13689:HG2_PB_SVrefine2PBcRplusDovetail_960:HG2_PB_SVrefine2PB10Xhap12_7907:HG2_PB_SVrefine2Falcon2Bionano_5180:HG2_PB_SVrefine2Falcon1plusDovetail_994;NumExactMatchSVs=12;ClusterMaxShiftDist=0.225621;ClusterMaxSizeDiff=0.225621;ClusterMaxEditDist=0.23327;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-232;DistBack=-175;DistForward=-137;DistMin=-175;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=169;REFWIDENED=10:413834-414234;PctSeqSimilarity=0.9947;PctSizeSimilarity=0.9957;PctRecOverlap=0.8112;SizeDiff=1;StartDistance=-44;EndDistance=-43;GTMatch=0;TruScore=93;MatchId=322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:30:./.:13:4:4:23:./.:0:2:0:9:0/1:11:19:./.:.:.:.:.:.
chr10	774939	HG4_PB_HySA_15875	TTCCCCCACCCTCTCTGTGCTGCCATGCCCTTCCTGTGCCACCATGCCCTCCCCAATCCTCCCCCTGCACCATGCGC	T	20	PASS	ClusterIDs=HG2_PB_HySA_19663:HG2_PB_PB10Xdip_4583:HG2_PB_pbsv_10853:HG2_PB_assemblyticsPBcR_2181:HG3_PB_HySA_16371:HG4_PB_HySA_15875:HG4_PB_assemblyticsfalcon_2129:HG4_Ill_scalpel_10020:HG4_Ill_GATKHC_17475:HG4_Ill_GATKHCSBGrefine_7494:HG4_Ill_150bpfermikitraw_13822:HG4_10X_allpass_2091:HG3_Ill_scalpel_10426:HG3_Ill_GATKHC_17367:HG3_Ill_250bpfermikitraw_14143:HG2_Ill_scalpel_10283:HG2_Ill_GATKHCSBGrefine_7322:HG4_Ill_svaba_13643:HG3_PB_pbsv_10591:HG3_Ill_svaba_13690:HG2_Ill_svaba_13548:HG4_PB_pbsv_10883;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7322:HG2_Ill_scalpel_10283:HG2_PB_assemblyticsPBcR_2181:HG4_PB_HySA_15875:HG4_Ill_scalpel_10020:HG4_Ill_GATKHC_17475:HG4_Ill_GATKHCSBGrefine_7494:HG4_Ill_150bpfermikitraw_13822:HG4_10X_allpass_2091:HG3_Ill_scalpel_10426:HG3_Ill_GATKHC_17367:HG3_Ill_250bpfermikitraw_14143;NumExactMatchSVs=12;ClusterMaxShiftDist=0.225352;ClusterMaxSizeDiff=0.225352;ClusterMaxEditDist=0.225352;PBcalls=9;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-76;DistBack=2197;DistForward=-47;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=198;REFWIDENED=10:774853-775126;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:14:./.:8:14:11:0:./.:0:0:5:0:./.:0:3:./.:.:.:.:3109:.
chr10	1163785	HG3_Ill_SVrefine2DISCOVARDovetail_8006	GCATCTGCGCTGCGTGCACTCAGCCACCCTCAGCCAGCTCTGTTTGAAGTCCCTGCACGCATCTGAGCCGCGTGCACTCAGCCACCCTCAACCAGCTCTGTTTGAAGTCCCTGCACACATCTGAGCCGCGTGCACTCAGCCACCCTCAGCCAGCCCTACTTGAAGTCCCTGCACA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1023:HG4_PB_HySA_15889:HG4_PB_pbsv_10902:HG2_PB_pbsv_10880:HG3_PB_pbsv_10609:HG4_PB_SVrefine2PBcRDovetail_5471:HG4_PB_SVrefine2Falcon1Dovetail_6677:HG3_PB_SVrefine2PBcRDovetail_5080:HG3_PB_SVrefine2Falcon1Dovetail_6596:HG3_Ill_SVrefine2DISCOVARDovetail_8006:HG2_PB_SVrefine2PBcRplusDovetail_987:HG2_PB_SVrefine2PB10Xhap12_7946:HG2_PB_SVrefine2Falcon2Bionano_5203;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1023:HG4_PB_SVrefine2PBcRDovetail_5471:HG4_PB_SVrefine2Falcon1Dovetail_6677:HG3_PB_SVrefine2PBcRDovetail_5080:HG3_PB_SVrefine2Falcon1Dovetail_6596:HG3_Ill_SVrefine2DISCOVARDovetail_8006:HG2_PB_SVrefine2PBcRplusDovetail_987:HG2_PB_SVrefine2PB10Xhap12_7946:HG2_PB_SVrefine2Falcon2Bionano_5203;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0231214;ClusterMaxSizeDiff=0.0231214;ClusterMaxEditDist=0.0635838;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-174;DistBack=15536;DistForward=-117;DistMin=-117;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=588;REFWIDENED=10:1163786-1164547;PctSeqSimilarity=0.9591;PctSizeSimilarity=0.9885;PctRecOverlap=0.3714;SizeDiff=2;StartDistance=-110;EndDistance=-108;GTMatch=0;TruScore=77;MatchId=326.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:41:1/1:1:28:0:14:0/0:8:0:10:0:0/0:40:0:./.:.:.:.:.:.
chr10	1602667	HG2_PB_SVrefine2Falcon2Bionano_5220	CACCCTGGGTCGTCACACACGCGTGAACACACGGGGGGCACCCTGGGTCGTCACACACGCGTGAACACACGGGGGGCACCCTGGGTCGTCACACACGCGTGAACACACGGGGGGT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_10635:HG4_Ill_MetaSV_454:HG3_Ill_MetaSV_418:HG2_Ill_MetaSV_436:HG4_PB_HySA_15914:HG2_PB_HySA_19727:HG4_PB_SVrefine2PBcRDovetail_5482:HG4_PB_SVrefine2Falcon1Dovetail_6691:HG4_Ill_svaba_13671:HG4_Ill_manta_2617:HG4_Ill_SVrefine2DISCOVARDovetail_7811:HG4_Ill_GATKHC_17513:HG4_Ill_GATKHCSBGrefine_7519:HG4_10X_allpass_2094:HG3_Ill_svaba_13724:HG3_Ill_manta_2514:HG3_Ill_SVrefine2DISCOVARDovetail_8012:HG3_Ill_GATKHC_17411:HG3_Ill_GATKHCSBGrefine_7252:HG3_Ill_250bpfermikitraw_14170:HG3_Ill_150bpfermikitraw_13716:HG3_10X_allpass_2165:HG2_PB_SVrefine2PBcRplusDovetail_1004:HG2_PB_SVrefine2PB10Xhap12_7965:HG2_PB_SVrefine2Falcon2Bionano_5220:HG2_PB_SVrefine2Falcon1plusDovetail_1043:HG2_Ill_svaba_13584:HG2_Ill_manta_3073:HG2_Ill_SpiralSDKrefine_1421:HG2_Ill_SVrefine2DISCOVARplusDovetail_1147:HG2_Ill_GATKHC_17470:HG2_Ill_GATKHCSBGrefine_7338:HG2_Ill_250bpfermikitraw_14563:HG2_Ill_150bpfermikitraw_13676:HG2_10X_SVrefine210Xhap12_7691:HG4_Ill_Krunchall_15154:HG4_PB_assemblyticsfalcon_2180:HG4_PB_SVrefine2Falcon1Dovetail_6690:HG3_PB_SVrefine2PBcRDovetail_5090:HG3_PB_SVrefine2Falcon1Dovetail_6608:HG4_Ill_Krunchall_15153:HG3_PB_HySA_16429:HG3_Ill_Krunchall_14587:HG2_Ill_Krunchall_14880:HG2_PB_pbsv_10905:HG4_PB_pbsv_10930;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7691:HG2_Ill_150bpfermikitraw_13676:HG2_Ill_250bpfermikitraw_14563:HG2_Ill_GATKHCSBGrefine_7338:HG2_Ill_GATKHC_17470:HG2_Ill_SVrefine2DISCOVARplusDovetail_1147:HG2_Ill_SpiralSDKrefine_1421:HG2_Ill_manta_3073:HG2_Ill_svaba_13584:HG2_PB_SVrefine2Falcon1plusDovetail_1043:HG2_PB_SVrefine2Falcon2Bionano_5220:HG2_PB_SVrefine2PB10Xhap12_7965:HG2_PB_SVrefine2PBcRplusDovetail_1004:HG3_10X_allpass_2165:HG3_Ill_150bpfermikitraw_13716:HG3_Ill_250bpfermikitraw_14170:HG3_Ill_GATKHCSBGrefine_7252:HG3_Ill_GATKHC_17411:HG3_Ill_SVrefine2DISCOVARDovetail_8012:HG3_Ill_manta_2514:HG3_Ill_svaba_13724:HG4_10X_allpass_2094:HG4_Ill_GATKHCSBGrefine_7519:HG4_Ill_GATKHC_17513:HG4_Ill_SVrefine2DISCOVARDovetail_7811:HG4_Ill_manta_2617:HG4_Ill_svaba_13671:HG4_PB_SVrefine2Falcon1Dovetail_6691:HG4_PB_SVrefine2PBcRDovetail_5482;NumExactMatchSVs=29;ClusterMaxShiftDist=0.180328;ClusterMaxSizeDiff=0.180328;ClusterMaxEditDist=0.188525;PBcalls=16;Illcalls=27;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=14;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-114;DistBack=-115;DistForward=11215;DistMin=-115;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=48;REFWIDENED=10:1602620-1602781;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:31:./.:0:0:0:0:./.:0:0:0:0:1/1:1:41:./.:.:.:.:.:.
chr10	2013661	HG2_PB_SVrefine2Falcon2Bionano_5228	ACTGCATGGTCCATTGTGATGTGCACATTACTCCGACAATCAGCAGAGGCAGGTATAGGAGTCTGCATGGTCCATTGTGATGTGCACATTACTCCGACAATCAGCAGAGGCAGGTATAGGCGT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_10944:HG2_PB_SVrefine2Falcon1plusDovetail_1049:HG2_PB_assemblyticsfalcon_2271:HG3_PB_SVrefine2PBcRDovetail_5097:HG4_Ill_250bpfermikitraw_14469:HG2_PB_SVrefine2PB10Xhap12_7975:HG2_PB_PB10Xdip_3382:HG4_Ill_150bpfermikitraw_13859:HG2_10X_SVrefine210Xhap12_7699:HG2_PB_pbsv_10919:HG3_PB_pbsv_10650:HG4_PB_SVrefine2PBcRDovetail_5487:HG4_PB_SVrefine2Falcon1Dovetail_6700:HG4_PB_HySA_15941:HG4_Ill_SVrefine2DISCOVARDovetail_7814:HG3_PB_SVrefine2Falcon1Dovetail_6617:HG3_Ill_SVrefine2DISCOVARDovetail_8021:HG2_PB_SVrefine2PBcRplusDovetail_1011:HG2_PB_SVrefine2PB10Xhap12_7974:HG2_PB_SVrefine2Falcon2Bionano_5228:HG2_Ill_SVrefine2DISCOVARplusDovetail_1154;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1154:HG2_PB_SVrefine2Falcon2Bionano_5228:HG2_PB_SVrefine2PB10Xhap12_7974:HG2_PB_SVrefine2PBcRplusDovetail_1011:HG3_Ill_SVrefine2DISCOVARDovetail_8021:HG3_PB_SVrefine2Falcon1Dovetail_6617:HG4_Ill_SVrefine2DISCOVARDovetail_7814:HG4_PB_HySA_15941:HG4_PB_SVrefine2Falcon1Dovetail_6700:HG4_PB_SVrefine2PBcRDovetail_5487;NumExactMatchSVs=10;ClusterMaxShiftDist=0.210526;ClusterMaxSizeDiff=0.210526;ClusterMaxEditDist=0.252252;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-122;DistBack=5474;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=191;REFWIDENED=10:2013662-2013974;PctSeqSimilarity=0.9917;PctSizeSimilarity=1;PctRecOverlap=0.5203;SizeDiff=0;StartDistance=-59;EndDistance=-59;GTMatch=0;TruScore=83;MatchId=328.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:41:0|1:25:0:1:42:./.:2:1:5:1:0/1:6:6:./.:.:.:.:.:.
chr10	2379470	HG2_Ill_SVrefine2DISCOVARplusDovetail_1162	TCAAAAAGCCGTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1231:HG2_10X_allpass_1797:HG2_Ill_Krunchall_14894:HG3_PB_assemblyticsfalcon_2267:HG3_PB_SVrefine2Falcon1Dovetail_6624:HG3_PB_pbsv_10660:HG2_PB_pbsv_10926:HG2_Ill_breakscan11_1583:HG3_PB_HySA_16462:HG3_Ill_MetaSV_423:HG2_Ill_MetaSV_440:HG4_PB_assemblyticsfalcon_2215:HG4_PB_SVrefine2Falcon1Dovetail_6707:HG3_PB_SVrefine2PBcRDovetail_5103:HG3_Ill_scalpel_10450:HG3_Ill_SVrefine2DISCOVARDovetail_8027:HG3_Ill_GATKHCSBGrefine_7268:HG3_10X_allpass_2166:HG2_PB_SVrefine2PB10Xhap12_7980:HG2_Ill_manta_3078:HG2_Ill_SpiralSDKrefine_1434:HG2_Ill_SVrefine2DISCOVARplusDovetail_1162:HG2_Ill_GATKHCSBGrefine_7359:HG2_10X_SVrefine210Xhap12_7703;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7703:HG2_Ill_GATKHCSBGrefine_7359:HG2_Ill_SVrefine2DISCOVARplusDovetail_1162:HG2_Ill_SpiralSDKrefine_1434:HG2_Ill_manta_3078:HG2_PB_SVrefine2PB10Xhap12_7980:HG3_10X_allpass_2166:HG3_Ill_GATKHCSBGrefine_7268:HG3_Ill_SVrefine2DISCOVARDovetail_8027:HG3_Ill_scalpel_10450:HG3_PB_SVrefine2PBcRDovetail_5103:HG4_PB_SVrefine2Falcon1Dovetail_6707:HG4_PB_assemblyticsfalcon_2215;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0987261;ClusterMaxSizeDiff=0.0955414;ClusterMaxEditDist=0.231405;PBcalls=9;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=19693;DistForward=-327;DistMin=-327;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=10:2379471-2379813;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:25:./.:9:11:16:15:1|0:0:27:42:0:0/1:27:19:0/1:22:8:.:.:.
chr10	2519717	HG4_PB_SVrefine2PBcRDovetail_5493	GCTCACATCACATTGCACATGGGCGTTTGCTGTGATGAGAAGTCATTGCATGTTTCCAAGCAGCCATT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7704:HG2_PB_HySA_19763:HG2_PB_assemblyticsfalcon_2283:HG3_PB_pbsv_10663:HG2_PB_pbsv_10929:HG4_PB_pbsv_10956:HG4_PB_HySA_15963:HG3_PB_HySA_16464:HG4_PB_SVrefine2PBcRDovetail_5493:HG4_PB_SVrefine2Falcon1Dovetail_6709:HG4_Ill_svaba_13693:HG4_Ill_scalpel_10044:HG4_Ill_manta_2622:HG4_Ill_Krunchall_15173:HG4_Ill_GATKHCSBGrefine_7538:HG4_Ill_250bpfermikitraw_14480:HG4_Ill_150bpfermikitraw_13864:HG3_PB_SVrefine2Falcon1Dovetail_6626:HG3_Ill_svaba_13742:HG3_Ill_scalpel_10452:HG3_Ill_SVrefine2DISCOVARDovetail_8028:HG3_Ill_Krunchall_14602:HG3_Ill_GATKHCSBGrefine_7269:HG3_Ill_250bpfermikitraw_14187:HG3_Ill_150bpfermikitraw_13732:HG2_PB_SVrefine2PBcRplusDovetail_1018:HG2_PB_SVrefine2PB10Xhap12_7983:HG2_PB_SVrefine2Falcon2Bionano_5234:HG2_Ill_svaba_13601:HG2_Ill_scalpel_10311:HG2_Ill_manta_3080:HG2_Ill_SpiralSDKrefine_1435:HG2_Ill_SVrefine2DISCOVARplusDovetail_1165:HG2_Ill_GATKHCSBGrefine_7360:HG2_Ill_250bpfermikitraw_14584:HG2_Ill_150bpfermikitraw_13694;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7704:HG4_PB_SVrefine2PBcRDovetail_5493:HG4_PB_SVrefine2Falcon1Dovetail_6709:HG4_Ill_svaba_13693:HG4_Ill_scalpel_10044:HG4_Ill_manta_2622:HG4_Ill_Krunchall_15173:HG4_Ill_GATKHCSBGrefine_7538:HG4_Ill_250bpfermikitraw_14480:HG4_Ill_150bpfermikitraw_13864:HG3_PB_SVrefine2Falcon1Dovetail_6626:HG3_Ill_svaba_13742:HG3_Ill_scalpel_10452:HG3_Ill_SVrefine2DISCOVARDovetail_8028:HG3_Ill_Krunchall_14602:HG3_Ill_GATKHCSBGrefine_7269:HG3_Ill_250bpfermikitraw_14187:HG3_Ill_150bpfermikitraw_13732:HG2_PB_SVrefine2PBcRplusDovetail_1018:HG2_PB_SVrefine2PB10Xhap12_7983:HG2_PB_SVrefine2Falcon2Bionano_5234:HG2_Ill_svaba_13601:HG2_Ill_scalpel_10311:HG2_Ill_manta_3080:HG2_Ill_SpiralSDKrefine_1435:HG2_Ill_SVrefine2DISCOVARplusDovetail_1165:HG2_Ill_GATKHCSBGrefine_7360:HG2_Ill_250bpfermikitraw_14584:HG2_Ill_150bpfermikitraw_13694;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0444444;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.0606061;PBcalls=13;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-67;DistBack=1;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=10:2519718-2519855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=330.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:1/1:2:21:2:33:./.:0:4:0:8:1/1:0:48:./.:.:.:.:.:.
chr10	2698820	HG2_Ill_SpiralSDKrefine_1440	CCTGATTAAATTTGTATGTATGCATTGTTTCATACTTCATATTTATGTGATTAAATTTGTATGCATGTATCGTTTCATACTTACCTCATATTTAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7710:HG4_PB_pbsv_10962:HG3_PB_pbsv_10670:HG2_PB_pbsv_10936:HG4_Ill_GATKHC_17555:HG4_Ill_GATKHCSBGrefine_7542:HG4_Ill_250bpfermikitraw_14487:HG3_Ill_svaba_13750:HG3_Ill_GATKHC_17441:HG3_Ill_GATKHCSBGrefine_7273:HG3_Ill_250bpfermikitraw_14194:HG3_Ill_150bpfermikitraw_13737:HG2_Ill_SpiralSDKrefine_1440:HG2_Ill_GATKHC_17497:HG2_Ill_GATKHCSBGrefine_7365:HG2_Ill_250bpfermikitraw_14590:HG3_PB_HySA_16472:HG3_PB_SVrefine2PBcRDovetail_5106:HG3_PB_SVrefine2Falcon1Dovetail_6630:HG3_Ill_SVrefine2DISCOVARDovetail_8031:HG2_PB_SVrefine2PBcRplusDovetail_1020:HG2_PB_SVrefine2PB10Xhap12_7986:HG2_PB_SVrefine2Falcon1plusDovetail_1059:HG2_Ill_SVrefine2DISCOVARplusDovetail_1169;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14590:HG2_Ill_GATKHCSBGrefine_7365:HG2_Ill_GATKHC_17497:HG2_Ill_SpiralSDKrefine_1440:HG3_Ill_150bpfermikitraw_13737:HG3_Ill_250bpfermikitraw_14194:HG3_Ill_GATKHCSBGrefine_7273:HG3_Ill_GATKHC_17441:HG3_Ill_svaba_13750:HG4_Ill_250bpfermikitraw_14487:HG4_Ill_GATKHCSBGrefine_7542:HG4_Ill_GATKHC_17555;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0518135;ClusterMaxSizeDiff=0.0518135;ClusterMaxEditDist=0.15544;PBcalls=9;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=-94;DistBack=-55;DistForward=818;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=295;REFWIDENED=10:2698586-2698974;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:35:./.:9:19:2:8:1|0:0:15:31:1:0/1:22:21:./.:.:.:.:.:.
chr10	3090736	HG2_Ill_GATKHC_17504	TCAGTCAGCAGTGGAGAGAAAACCCCCGAACCCAGAACCAGTCAGCAGTGGAGAGAAAACCCCCGAACCCAGAAC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1172:HG4_Ill_Spiral_889:HG3_Ill_Spiral_11411:HG2_Ill_Spiral_759:HG4_PB_assemblyticsfalcon_2236:HG2_PB_HySA_19787:HG3_PB_pbsv_10674:HG4_Ill_svaba_13706:HG4_Ill_Krunchall_15188:HG4_Ill_GATKHC_17563:HG4_Ill_GATKHCSBGrefine_7545:HG4_Ill_250bpfermikitraw_14494:HG4_Ill_150bpfermikitraw_13880:HG3_PB_assemblyticsfalcon_2290:HG3_Ill_svaba_13756:HG3_Ill_Krunchall_14615:HG3_Ill_GATKHC_17449:HG3_Ill_GATKHCSBGrefine_7275:HG3_Ill_250bpfermikitraw_14202:HG2_Ill_svaba_13612:HG2_Ill_manta_3085:HG2_Ill_SpiralSDKrefine_1446:HG2_Ill_Krunchall_14904:HG2_Ill_GATKHC_17504:HG2_Ill_GATKHCSBGrefine_7368:HG2_Ill_250bpfermikitraw_14596:HG2_PB_assemblyticsfalcon_2300:HG2_PB_assemblyticsPBcR_2268:HG2_PB_pbsv_10941:HG4_PB_pbsv_10966:HG4_PB_HySA_15981:HG2_PB_SVrefine2PB10Xhap12_7991;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14596:HG2_Ill_GATKHCSBGrefine_7368:HG2_Ill_GATKHC_17504:HG2_Ill_Krunchall_14904:HG2_Ill_SpiralSDKrefine_1446:HG2_Ill_manta_3085:HG2_Ill_svaba_13612:HG3_Ill_250bpfermikitraw_14202:HG3_Ill_GATKHCSBGrefine_7275:HG3_Ill_GATKHC_17449:HG3_Ill_Krunchall_14615:HG3_Ill_svaba_13756:HG3_PB_assemblyticsfalcon_2290:HG4_Ill_150bpfermikitraw_13880:HG4_Ill_250bpfermikitraw_14494:HG4_Ill_GATKHCSBGrefine_7545:HG4_Ill_GATKHC_17563:HG4_Ill_Krunchall_15188:HG4_Ill_svaba_13706;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0397351;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.0921053;PBcalls=10;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-74;DistBack=1876;DistForward=4865;DistMin=1876;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=112;REFWIDENED=10:3090684-3090869;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=332.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:26:2:1:28:0|1:20:0:0:7:0/1:17:14:./.:.:.:.:.:.
chr10	3095676	HG3_PB_SVrefine2PBcRDovetail_5109	TTTCCCCTCCAGCCCACCCTTCCCCTCCAGCCCACCCTTCCCCTCCAGTCCACCTTTTCCCTCCAGCCCACCCTTCCCCTCCAGCCCACCCTTCCCCTCCAGCCCACCCTTCCCCTCCAGCCCACCCTTCCCCTCCAGCCCACCCTTCCCCTCCAGTCCACCTTTTCCCTCCAGCCCACCCTTCCCCTCCAGCCCACCCTTCCCCTCCAGCCCACCCTTCCCCTCCAGCCCACCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_10942:HG4_Ill_Krunchall_15189:HG2_PB_HySA_19789:HG4_PB_HySA_15982:HG3_PB_HySA_16482:HG4_PB_pbsv_10967:HG4_10X_allpass_2096:HG3_10X_allpass_2168:HG4_Ill_MetaSV_460:HG2_Ill_MetaSV_445:HG3_PB_pbsv_10675:HG2_PB_HySA_19788:HG4_Ill_GATKHCSBGrefine_7546:HG4_PB_SVrefine2Falcon1Dovetail_6716:HG4_Ill_SVrefine2DISCOVARDovetail_7827:HG3_PB_SVrefine2PBcRDovetail_5109:HG3_PB_SVrefine2Falcon1Dovetail_6634:HG3_Ill_SVrefine2DISCOVARDovetail_8034:HG2_PB_SVrefine2PBcRplusDovetail_1024:HG2_PB_SVrefine2PB10Xhap12_7992:HG2_PB_SVrefine2Falcon2Bionano_5239:HG2_PB_SVrefine2Falcon1plusDovetail_1063:HG2_Ill_SVrefine2DISCOVARplusDovetail_1173:HG2_10X_SVrefine210Xhap12_7712:HG4_PB_SVrefine2PBcRDovetail_5498:HG4_PB_SVrefine2Falcon1Dovetail_6715;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7712:HG2_Ill_SVrefine2DISCOVARplusDovetail_1173:HG2_PB_SVrefine2Falcon1plusDovetail_1063:HG2_PB_SVrefine2Falcon2Bionano_5239:HG2_PB_SVrefine2PB10Xhap12_7992:HG2_PB_SVrefine2PBcRplusDovetail_1024:HG3_Ill_SVrefine2DISCOVARDovetail_8034:HG3_PB_SVrefine2Falcon1Dovetail_6634:HG3_PB_SVrefine2PBcRDovetail_5109:HG4_Ill_SVrefine2DISCOVARDovetail_7827:HG4_PB_SVrefine2Falcon1Dovetail_6716;NumExactMatchSVs=11;ClusterMaxShiftDist=0.267943;ClusterMaxSizeDiff=0.267943;ClusterMaxEditDist=0.267943;PBcalls=16;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-234;DistBack=4865;DistForward=-139;DistMin=-139;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=97;REFWIDENED=10:3095677-3096007;PctSeqSimilarity=0.9792;PctSizeSimilarity=1;PctRecOverlap=0.9106;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=96;MatchId=333.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:73:1/1:2:37:0:38:./.:4:5:9:7:0/1:3:12:./.:.:.:.:.:.
chr10	3258113	HG3_Ill_SVrefine2DISCOVARDovetail_8038	CGTTCTTTTAGCTGGGGAGAAATAATGACAACTAATGCATACAATGACAACTAATGCATAATGACAACTAATGCAT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_10684:HG4_PB_HySA_15993:HG2_PB_pbsv_10949:HG4_Ill_GATKHC_17575:HG4_Ill_GATKHCSBGrefine_7553:HG2_Ill_GATKHC_17518:HG2_Ill_GATKHCSBGrefine_7373:HG4_Ill_GATKHC_17574:HG4_Ill_GATKHCSBGrefine_7552:HG2_PB_PB10Xdip_3628:HG2_PB_PB10Xdip_3627:HG2_PB_assemblyticsPBcR_2279:HG4_PB_assemblyticsfalcon_2248:HG3_PB_assemblyticsfalcon_2304:HG2_PB_assemblyticsfalcon_2308:HG4_PB_pbsv_10975:HG3_PB_HySA_16506:HG2_PB_HySA_19805:HG4_Ill_Krunchall_15195:HG4_Ill_250bpfermikitraw_14503:HG3_PB_SVrefine2PBcRDovetail_5114:HG3_Ill_SVrefine2DISCOVARDovetail_8038:HG3_Ill_GATKHCSBGrefine_7285:HG3_Ill_250bpfermikitraw_14216:HG3_Ill_150bpfermikitraw_13758:HG2_Ill_SpiralSDKrefine_1452:HG2_Ill_SVrefine2DISCOVARplusDovetail_1177:HG2_Ill_Krunchall_14911:HG2_Ill_GATKHC_17517:HG2_Ill_GATKHCSBGrefine_7372:HG2_Ill_250bpfermikitraw_14607:HG2_10X_SVrefine210Xhap12_7717;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7717:HG2_Ill_250bpfermikitraw_14607:HG2_Ill_GATKHCSBGrefine_7372:HG2_Ill_GATKHC_17517:HG2_Ill_Krunchall_14911:HG2_Ill_SVrefine2DISCOVARplusDovetail_1177:HG2_Ill_SpiralSDKrefine_1452:HG3_Ill_150bpfermikitraw_13758:HG3_Ill_250bpfermikitraw_14216:HG3_Ill_GATKHCSBGrefine_7285:HG3_Ill_SVrefine2DISCOVARDovetail_8038:HG3_PB_SVrefine2PBcRDovetail_5114:HG4_Ill_250bpfermikitraw_14503:HG4_Ill_Krunchall_15195;NumExactMatchSVs=14;ClusterMaxShiftDist=0.138889;ClusterMaxSizeDiff=0.138889;ClusterMaxEditDist=0.15493;PBcalls=13;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-75;DistBack=3867;DistForward=6969;DistMin=3867;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=117;REFWIDENED=10:3258114-3258305;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=334.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:1:21:2:19:./.:0:3:0:2:1/1:0:34:./.:.:.:.:.:.
chr10	3415453	HG3_PB_SVrefine2PBcRDovetail_5117	GGGGTTTAGCTCCTGAGCCTTGCGTTAGAAGCTCAACTCTGAAATTCACATGGCCTATGACCTTGGGAAGTTCCGTGTGTCCT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1179:HG2_PB_assemblyticsfalcon_2314:HG2_PB_pbsv_10953:HG3_Ill_250bpfermikitraw_14221:HG2_Ill_GATKHC_17522:HG3_PB_pbsv_10692:HG4_PB_SVrefine2Falcon1Dovetail_6724:HG3_PB_SVrefine2PBcRDovetail_5117:HG3_PB_SVrefine2Falcon1Dovetail_6643;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1179:HG4_PB_SVrefine2Falcon1Dovetail_6724:HG3_PB_SVrefine2PBcRDovetail_5117:HG3_PB_SVrefine2Falcon1Dovetail_6643;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0246914;ClusterMaxSizeDiff=0.0243902;ClusterMaxEditDist=0.0740741;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-82;DistBack=54574;DistForward=-83;DistMin=-83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=492;REFWIDENED=10:3415454-3416027;PctSeqSimilarity=0.9929;PctSizeSimilarity=1;PctRecOverlap=0.1687;SizeDiff=0;StartDistance=-69;EndDistance=-69;GTMatch=0;TruScore=72;MatchId=335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:1|0:1:20:24:3:./.:2:1:1:0:./.:3:1:./.:.:.:.:.:.
chr10	3449200	HG2_Ill_SVrefine2DISCOVARplusDovetail_1180	TCCTGGCACCCAAGGATGGAGTCGGTTCACTGCAGTCAGCAGAAGTAGTTTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7720:HG2_PB_assemblyticsfalcon_2315:HG4_Ill_Spiral_890:HG2_PB_HySA_19821:HG2_Ill_Spiral_761:HG4_PB_pbsv_10980:HG2_PB_pbsv_10954:HG3_PB_pbsv_10693:HG4_PB_HySA_16005:HG3_PB_HySA_16517:HG4_PB_SVrefine2PBcRDovetail_5506:HG4_PB_SVrefine2Falcon1Dovetail_6725:HG4_Ill_svaba_13720:HG4_Ill_scalpel_10064:HG4_Ill_manta_2630:HG4_Ill_SVrefine2DISCOVARDovetail_7832:HG4_Ill_Krunchall_15201:HG4_Ill_GATKHCSBGrefine_7555:HG4_Ill_250bpfermikitraw_14510:HG4_Ill_150bpfermikitraw_13888:HG3_PB_SVrefine2PBcRDovetail_5118:HG3_PB_SVrefine2Falcon1Dovetail_6644:HG3_Ill_svaba_13777:HG3_Ill_scalpel_10469:HG3_Ill_SVrefine2DISCOVARDovetail_8040:HG3_Ill_Krunchall_14627:HG3_Ill_GATKHCSBGrefine_7286:HG3_Ill_250bpfermikitraw_14224:HG3_Ill_150bpfermikitraw_13764:HG2_PB_SVrefine2PBcRplusDovetail_1031:HG2_PB_SVrefine2PB10Xhap12_8001:HG2_PB_SVrefine2Falcon2Bionano_5247:HG2_Ill_svaba_13627:HG2_Ill_scalpel_10326:HG2_Ill_manta_3086:HG2_Ill_SpiralSDKrefine_1458:HG2_Ill_SVrefine2DISCOVARplusDovetail_1180:HG2_Ill_250bpfermikitraw_14612:HG2_Ill_150bpfermikitraw_13717;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7720:HG4_PB_SVrefine2PBcRDovetail_5506:HG4_PB_SVrefine2Falcon1Dovetail_6725:HG4_Ill_svaba_13720:HG4_Ill_scalpel_10064:HG4_Ill_manta_2630:HG4_Ill_SVrefine2DISCOVARDovetail_7832:HG4_Ill_Krunchall_15201:HG4_Ill_GATKHCSBGrefine_7555:HG4_Ill_250bpfermikitraw_14510:HG4_Ill_150bpfermikitraw_13888:HG3_PB_SVrefine2PBcRDovetail_5118:HG3_PB_SVrefine2Falcon1Dovetail_6644:HG3_Ill_svaba_13777:HG3_Ill_scalpel_10469:HG3_Ill_SVrefine2DISCOVARDovetail_8040:HG3_Ill_Krunchall_14627:HG3_Ill_GATKHCSBGrefine_7286:HG3_Ill_250bpfermikitraw_14224:HG3_Ill_150bpfermikitraw_13764:HG2_PB_SVrefine2PBcRplusDovetail_1031:HG2_PB_SVrefine2PB10Xhap12_8001:HG2_PB_SVrefine2Falcon2Bionano_5247:HG2_Ill_svaba_13627:HG2_Ill_scalpel_10326:HG2_Ill_manta_3086:HG2_Ill_SpiralSDKrefine_1458:HG2_Ill_SVrefine2DISCOVARplusDovetail_1180:HG2_Ill_250bpfermikitraw_14612:HG2_Ill_150bpfermikitraw_13717;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0392157;PBcalls=14;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=8038;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=61;REFWIDENED=10:3449201-3449312;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=336.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:35:1/1:1:16:2:10:1/1:0:10:0:8:1/1:0:44:./.:.:.:.:1329:.
chr10	3721546	HG3_PB_assemblyticsfalcon_2322	ACACCTTACACCCCAATGTGCACCGTTACACACCTTACACCCCAAATGTGCACCATTATC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_10961:HG2_PB_assemblyticsPBcR_2293:HG3_PB_HySA_16525:HG3_PB_pbsv_10700:HG4_PB_pbsv_10988:HG4_PB_HySA_16018:HG2_PB_HySA_19829:HG2_PB_assemblyticsfalcon_2324:HG4_PB_assemblyticsfalcon_2267:HG4_Ill_svaba_13729:HG4_Ill_scalpel_10068:HG4_Ill_manta_2631:HG4_Ill_Krunchall_15210:HG4_Ill_GATKHC_17587:HG4_Ill_GATKHCSBGrefine_7559:HG4_Ill_250bpfermikitraw_14519:HG4_Ill_150bpfermikitraw_13895:HG3_PB_assemblyticsfalcon_2322:HG3_Ill_svaba_13785:HG3_Ill_scalpel_10472:HG3_Ill_Krunchall_14634:HG3_Ill_GATKHC_17472:HG3_Ill_GATKHCSBGrefine_7290:HG3_Ill_250bpfermikitraw_14233:HG3_Ill_150bpfermikitraw_13770:HG2_Ill_svaba_13633:HG2_Ill_scalpel_10331:HG2_Ill_manta_3089:HG2_Ill_SpiralSDKrefine_1460:HG2_Ill_Krunchall_14925:HG2_Ill_GATKHC_17532:HG2_Ill_GATKHCSBGrefine_7378:HG2_Ill_250bpfermikitraw_14621:HG2_Ill_150bpfermikitraw_13726:HG2_Ill_breakscan11_1587;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13726:HG2_Ill_250bpfermikitraw_14621:HG2_Ill_GATKHCSBGrefine_7378:HG2_Ill_GATKHC_17532:HG2_Ill_Krunchall_14925:HG2_Ill_SpiralSDKrefine_1460:HG2_Ill_manta_3089:HG2_Ill_scalpel_10331:HG2_Ill_svaba_13633:HG3_Ill_150bpfermikitraw_13770:HG3_Ill_250bpfermikitraw_14233:HG3_Ill_GATKHCSBGrefine_7290:HG3_Ill_GATKHC_17472:HG3_Ill_Krunchall_14634:HG3_Ill_scalpel_10472:HG3_Ill_svaba_13785:HG3_PB_assemblyticsfalcon_2322:HG4_Ill_150bpfermikitraw_13895:HG4_Ill_250bpfermikitraw_14519:HG4_Ill_GATKHCSBGrefine_7559:HG4_Ill_GATKHC_17587:HG4_Ill_Krunchall_15210:HG4_Ill_manta_2631:HG4_Ill_scalpel_10068:HG4_Ill_svaba_13729:HG4_PB_assemblyticsfalcon_2267;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0338983;PBcalls=10;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=4028;DistForward=-49;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=10:3721545-3721621;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=338.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:79:1/1:4:47:4:22:1/1:0:28:1:35:1/1:0:12:./.:.:.:.:.:.
chr10	4018518	HG4_10X_allpass_2099	TAGATGGATGGATGGCTGCAGGGATGGATGCATGGGTGGATGGATAGATGGATGAATGGAC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_2329:HG4_Ill_GATKHC_17593:HG4_Ill_GATKHCSBGrefine_7562:HG3_Ill_GATKHC_17476:HG3_Ill_GATKHCSBGrefine_7292:HG2_Ill_GATKHC_17539:HG2_Ill_GATKHCSBGrefine_7380:HG2_PB_pbsv_10964:HG4_Ill_Krunchall_15213:HG3_PB_pbsv_10701:HG4_Ill_manta_2632:HG3_Ill_manta_2523:HG3_PB_HySA_16529:HG4_PB_pbsv_10991:HG4_Ill_svaba_13731:HG4_Ill_scalpel_10072:HG4_Ill_Krunchall_15212:HG4_Ill_250bpfermikitraw_14523:HG4_Ill_150bpfermikitraw_13898:HG4_10X_allpass_2099:HG3_Ill_svaba_13789:HG3_Ill_scalpel_10476:HG3_Ill_Krunchall_14637:HG3_Ill_250bpfermikitraw_14236:HG3_Ill_150bpfermikitraw_13773:HG2_Ill_svaba_13637:HG2_Ill_scalpel_10335:HG2_Ill_SpiralSDKrefine_1463:HG2_Ill_Krunchall_14931:HG2_Ill_250bpfermikitraw_14625:HG2_Ill_150bpfermikitraw_13729;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13729:HG2_Ill_250bpfermikitraw_14625:HG2_Ill_Krunchall_14931:HG2_Ill_SpiralSDKrefine_1463:HG2_Ill_scalpel_10335:HG2_Ill_svaba_13637:HG3_Ill_150bpfermikitraw_13773:HG3_Ill_250bpfermikitraw_14236:HG3_Ill_Krunchall_14637:HG3_Ill_scalpel_10476:HG3_Ill_svaba_13789:HG4_10X_allpass_2099:HG4_Ill_150bpfermikitraw_13898:HG4_Ill_250bpfermikitraw_14523:HG4_Ill_Krunchall_15212:HG4_Ill_scalpel_10072:HG4_Ill_svaba_13731:HG4_PB_pbsv_10991;NumExactMatchSVs=18;ClusterMaxShiftDist=0.254545;ClusterMaxSizeDiff=0.254545;ClusterMaxEditDist=0.254545;PBcalls=5;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-60;DistBack=5;DistForward=41616;DistMin=5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=10:4018517-4018591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:13:0|1:27:1:3:20:1|0:0:22:55:1:0/1:25:22:./.:.:.:.:.:.
chr10	4290062	HG3_PB_pbsv_10705	GCCCACATCTTCCCCATTTAGTGAGGCTCCCAAATTCTGCACATCAAGTTCAAAGAGCACATCACATACAAAGAACAGAAGCTTATTTATTAATTTAAAGCTGATTCAAACTTCCCCTTAATACCCAATCCAGAAAGTTAAGACTGATTCTAAATGTTAAAGTGTGTTCAGGAAACATGGTCTTGTTCATCAACTCAGATTTCCTCCAGGTTCCTGAGCAAGGGGGAATTGCCTGGGCCCCGTGCATAACTCCTTCTCCTGGTTCACGCTTCTTGTGTGTCCCTGAAGATGTTCCTTGTCATTCTGGTTGCTAGACGCCCTAGTGACACTTGATTCCAGTTCTCTGAGTGGTGAGTTCAGTGTATTCTCATGACTTGGTGATTTAGCTGGACTCTATCTATCTAATATCAGGCCTTGAGGTCAGTACGTACACCCTGGCATCTGGATCTGACCCCATTCAGTCCTCAGCCAGTGCAGCTCTCCCTGCAGACTTCGGCTGGTTTGTTGAAGCACCTCCAGAAAAGCTCCTTGGCTCTGTACTCAGAACCCTCCTAATCCTTTGGGCAAAGGAAAACAACTGCATTGCTATCATATTGCAGACACCCTAAGGATGCCTCAGGAAAGATCACCCCAGGCTCTCCCCGCCTCACCAAGCTGCATGCTCACAGATACTGCATTATAGGTAATGACAGCAGCATCATAAGTGGGTAAGTGGGCACCCTGTTCATCAGTCTTCTCTCTCATCCCAGAGAGACAGCCTTTCCTCCTAGCTGCTGCTCAAAATCCTTCCCCTTCTGAAAGAGGGTCGGAGAATGTGTGCCCCAACATTGCCCCCTTCTGTCTCCATCTCTCGTGCTTCCACCTTTCTGTCCAGGTGTTACCCTATTTCTTATCTCCTCCCGTCCTCTGTTGGCTTCTGCTCTCCCTCTTTCCTAGAGCTGTGGTGATTGAACAGCGCCAGAGAACATGTTTCATTGAGAATATATAGGAAAATATATTAGTTTAATATTTTTAAAACCTATCTCTATTAGGTCATTTGAAAAAACAACAGGCAAACAAAATCCCTCCCTACTTATAGACCCATCTTTCCCCTGTCCCAGGGAAGTGTCTCAAGAATATAGACTATATTTTGCCGCTGTCTTCTCACCAACTTTTCACGTCTTAATCCCTCAGCCTGACCGCCACCCCCTTAACTCCACTGATATATTCCTGACCACCAATGATTCCCAGGCCAGCAAATCTAATGACAACTTCCATGCATCTTCCTTAACTATGAAAGAGCATTTGTACTACTGATCTCTCCTTTGTGAAACACTTATGTTTTCGGTTTCAAGTAGACGACCTGCACTGATTTTTGTCTGACATCAGTGACTTAGCCTTCTCAGTCTTTTTTATTTTTATTTTTTTTCAGTGTCACCTCTAAACATAGAACAATCTGTGTTGGAGTTACTTAAGTGCAGGTCATCTTCATATTCACTCTAGACTCTTCCTATTCACTCCCACAATTCCCATTGTCAGCTCAACATCAATGAAACACTAAAATAACAAAGGAGCGCTACAGCTCTTCTGAAATTGGAAAACCCATATCCTACTGCACACCTACAATCTCCCCGTGATGCCA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_2302:HG2_10X_allpass_1798:HG4_Ill_Krunchall_15217:HG3_Ill_Krunchall_14640:HG3_Ill_MetaSV_430:HG2_Ill_tnscope_1232:HG4_PB_pbsv_10995:HG4_PB_SVrefine2PBcRDovetail_5515:HG4_PB_SVrefine2Falcon1Dovetail_6737:HG4_Ill_SVrefine2DISCOVARDovetail_7844:HG4_Ill_MetaSV_469:HG4_Ill_Cortex_327:HG4_10X_allpass_2100:HG3_PB_pbsv_10705:HG3_PB_assemblyticsfalcon_2334:HG3_PB_SVrefine2PBcRDovetail_5126:HG3_Ill_SVrefine2DISCOVARDovetail_8052:HG3_Ill_GATKHCSBGrefine_7293:HG3_Ill_Cortex_342:HG3_10X_allpass_2171:HG2_PB_pbsv_10969:HG2_PB_SVrefine2PBcRplusDovetail_1041:HG2_PB_SVrefine2PB10Xhap12_8013:HG2_PB_SVrefine2Falcon2Bionano_5255:HG2_PB_SVrefine2Falcon1plusDovetail_1080:HG2_Ill_breakscan11_1588:HG2_Ill_SpiralSDKrefine_1468:HG2_Ill_MetaSV_449:HG2_Ill_Cortex_702:HG4_PB_assemblyticsfalcon_2276:HG2_PB_assemblyticsfalcon_2336;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_Cortex_702:HG2_Ill_MetaSV_449:HG2_Ill_SpiralSDKrefine_1468:HG2_Ill_breakscan11_1588:HG2_PB_SVrefine2Falcon1plusDovetail_1080:HG2_PB_SVrefine2Falcon2Bionano_5255:HG2_PB_SVrefine2PB10Xhap12_8013:HG2_PB_SVrefine2PBcRplusDovetail_1041:HG2_PB_pbsv_10969:HG3_10X_allpass_2171:HG3_Ill_Cortex_342:HG3_Ill_GATKHCSBGrefine_7293:HG3_Ill_SVrefine2DISCOVARDovetail_8052:HG3_PB_SVrefine2PBcRDovetail_5126:HG3_PB_assemblyticsfalcon_2334:HG3_PB_pbsv_10705:HG4_10X_allpass_2100:HG4_Ill_Cortex_327:HG4_Ill_MetaSV_469:HG4_Ill_SVrefine2DISCOVARDovetail_7844:HG4_PB_SVrefine2Falcon1Dovetail_6737:HG4_PB_SVrefine2PBcRDovetail_5515:HG4_PB_pbsv_10995;NumExactMatchSVs=23;ClusterMaxShiftDist=0.135104;ClusterMaxSizeDiff=0.135104;ClusterMaxEditDist=0.135104;PBcalls=14;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1620;DistBack=41965;DistForward=-1618;DistMin=-1618;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=10:4290063-4291683;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=340.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:34:0|1:37:0:0:39:1|0:0:30:58:0:0/1:57:17:0/1:147:47:1598:.:.
chr10	4483950	HG4_Ill_GATKHCSBGrefine_7564	TATGGTCCAGCATCACTTATTAAATATTTTATCATTTTGTTTTTTATCTAAGAAAAGTCAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7733:HG4_PB_pbsv_10996:HG4_PB_HySA_16028:HG2_PB_HySA_19844:HG2_PB_pbsv_10970:HG4_Ill_svaba_13739:HG4_Ill_manta_2633:HG4_Ill_Krunchall_15221:HG4_Ill_GATKHC_17602:HG4_Ill_GATKHCSBGrefine_7564:HG4_Ill_Cortex_330:HG4_Ill_250bpfermikitraw_14529:HG4_Ill_150bpfermikitraw_13905:HG2_Ill_svaba_13645:HG2_Ill_manta_3091:HG2_Ill_breakscan11_1589:HG2_Ill_SpiralSDKrefine_1472:HG2_Ill_Krunchall_14939:HG2_Ill_GATKHC_17548:HG2_Ill_GATKHCSBGrefine_7381:HG2_Ill_Cortex_705:HG2_Ill_250bpfermikitraw_14632:HG2_Ill_150bpfermikitraw_13737:HG4_PB_assemblyticsfalcon_2280:HG4_PB_SVrefine2PBcRDovetail_5517:HG4_Ill_SVrefine2DISCOVARDovetail_7848:HG2_PB_SVrefine2PBcRplusDovetail_1043:HG2_Ill_SVrefine2DISCOVARplusDovetail_1191;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13737:HG2_Ill_250bpfermikitraw_14632:HG2_Ill_Cortex_705:HG2_Ill_GATKHCSBGrefine_7381:HG2_Ill_GATKHC_17548:HG2_Ill_Krunchall_14939:HG2_Ill_SpiralSDKrefine_1472:HG2_Ill_breakscan11_1589:HG2_Ill_manta_3091:HG2_Ill_svaba_13645:HG4_Ill_150bpfermikitraw_13905:HG4_Ill_250bpfermikitraw_14529:HG4_Ill_Cortex_330:HG4_Ill_GATKHCSBGrefine_7564:HG4_Ill_GATKHC_17602:HG4_Ill_Krunchall_15221:HG4_Ill_manta_2633:HG4_Ill_svaba_13739;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0833333;PBcalls=7;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=1;SVLEN=-60;DistBack=9386;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=10:4483928-4484033;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:31:0|1:42:2:0:29:0|1:31:0:0:20:0/1:26:27:./.:.:.:.:.:.
chr10	4649567	HG4_Ill_Krunchall_15224	TTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTCTCTTTCCATCCTTC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13740:HG3_PB_HySA_16547:HG2_PB_assemblyticsPBcR_2309:HG3_Ill_svaba_13799:HG3_Ill_Krunchall_14647:HG3_Ill_250bpfermikitraw_14244:HG2_Ill_svaba_13648:HG2_Ill_Krunchall_14945:HG2_Ill_250bpfermikitraw_14636:HG2_Ill_150bpfermikitraw_13741:HG3_Ill_GATKHC_17483:HG4_PB_HySA_16032:HG3_Ill_GATKHCSBGrefine_7296:HG2_Ill_GATKHC_17552:HG2_Ill_GATKHCSBGrefine_7385:HG4_PB_assemblyticsfalcon_2284:HG4_Ill_svaba_13742:HG4_Ill_scalpel_10078:HG4_Ill_Krunchall_15224:HG4_Ill_GATKHC_17604:HG4_Ill_GATKHCSBGrefine_7567:HG4_Ill_250bpfermikitraw_14533:HG4_Ill_150bpfermikitraw_13908:HG3_PB_assemblyticsfalcon_2338:HG3_Ill_svaba_13798:HG3_Ill_scalpel_10481:HG3_Ill_Krunchall_14646:HG3_Ill_GATKHC_17482:HG3_Ill_GATKHCSBGrefine_7295:HG3_Ill_250bpfermikitraw_14243:HG2_Ill_svaba_13647:HG2_Ill_scalpel_10343:HG2_Ill_Krunchall_14944:HG2_Ill_GATKHC_17551:HG2_Ill_GATKHCSBGrefine_7384:HG2_Ill_250bpfermikitraw_14635;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13740:HG4_PB_assemblyticsfalcon_2284:HG4_Ill_svaba_13742:HG4_Ill_scalpel_10078:HG4_Ill_Krunchall_15224:HG4_Ill_GATKHC_17604:HG4_Ill_GATKHCSBGrefine_7567:HG4_Ill_250bpfermikitraw_14533:HG4_Ill_150bpfermikitraw_13908:HG3_PB_assemblyticsfalcon_2338:HG3_Ill_svaba_13798:HG3_Ill_scalpel_10481:HG3_Ill_Krunchall_14646:HG3_Ill_GATKHC_17482:HG3_Ill_GATKHCSBGrefine_7295:HG3_Ill_250bpfermikitraw_14243:HG2_Ill_svaba_13647:HG2_Ill_scalpel_10343:HG2_Ill_Krunchall_14944:HG2_Ill_GATKHC_17551:HG2_Ill_GATKHCSBGrefine_7384:HG2_Ill_250bpfermikitraw_14635;NumExactMatchSVs=22;ClusterMaxShiftDist=0.255319;ClusterMaxSizeDiff=0.255319;ClusterMaxEditDist=0.255319;PBcalls=5;Illcalls=31;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=13;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=11390;DistForward=4542;DistMin=4542;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=10:4649566-4649631;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=342.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:66:1/1:2:37:7:32:./.:5:9:0:22:1/1:1:50:./.:.:.:.:.:.
chr10	4708519	HG3_Ill_SVrefine2DISCOVARDovetail_8057	TTGTTCTTTTCAAGATTGTTTTGACTGTTGTAGATCCCTTGTATTTCCATATAAATTTAGGATCAGCTTTTTAATTTCTGCAATAAAAGCCTGCTAAGATACTGACAGAGATTATATTAAATATGTTCAAAAATTTGGGTAGCAAAGCATCTTGTCAATATTTTCCTCCAACACATGAACACAAGTTATCTTTATATACTGTTTAGCAGTATATTCTTTGTTTCAAAGATAAAACATAATTTTTTCAATGATGTTTTATTGTTTTGGTGAGTAAGTTTTATATTTCTTTTGTTAAGTGTATTTCTAAGTATTTATCATTTTTGATGGAATTAAAAATTGAATTGTTTCCTTAATTTCATTTTAAAATTGTTCTTCGCTTCTGTATATATTCAGCTGATTTGTATATATTAATCTTACATTATGCAACCTTGCTAAACTCATCTATTTGCTGTAGTATTATTTTTATGCATACTCTGAGATTTCCTTAAGTTTTAAAATACAAAATATTATGTCATGTGCAATAGAGACTGTTGTCTGGATGTGGTCCATATACTTTCCTTGATGAATTGCCCTGGCCAGAACCTCCAGTACAATGTTAAATAGATGTATTGTCAGGGAGCATCATGGTCCTTTTCCTTGATCCTAGAGGGGAAGCTTTCAATCATTTATTATTAACTGTGATGCTAATTGAATGTTTCTTTAGAAATACTCTTTATCAGGTTGAAGAAGTTTCTTTACAGCCTTAGTTTGTTGAGTGTTTAGTTATGAAAATTTTATTTTTTCTGTGTCTACTGAGGTGATAAATGTATTTTGTTGCTTGTTATGTTAACATGATGTATTACACTGATTGATACTCATGTGGTACACCAACCTTGCATTCCTGGATTAAATCTTACTTAATCATGGTCTATACATCTATTTGATGTGTTGCTAGATTCAGTTTGCTGGTGTTTTATTGAGGATTTTTATCAATATTCATAAGGAATATTTATCTATAGATCTTTTCTTATAATATTTTTTCTAGTTTTGGTATCAGGGAAATATTTGTCTCATAGAATGAGCTGGGAAGTGCTTTGTTTTCTTCCACTTTTTTGGAAGAGTTTGTGAGTATGTACTGTTAGTTCTTCACTAAATGTCTGGTATAATTCACCAGTAAAGCCACAGAGGTATGGCATATTTTGGGGAAAGGTTTAAAATAATAAGTTCAATCTCTTTTCTTGTGACAATTCTATTCTGAGGATTTTTTGTGTAAGTTTTGATGTTGTATATCTTTCAAATAATTTGTCTATTTTTTCTAGATTATTCATTTTTTCTTGGCATACACTTGTTAGTAGACGTTTCTTATCATTCTTTTTATATTGACAAGTTCTATAGTAATGTCTTCTATCTCACCCTGTATAATATTAATTCAAGTATTTTCTCTTTTTTCTTAGTTAATTTCTTAGTCATTGTGGGCGGCTCATAAATAGCAAAGATTTATCTCTCACAGTTTTAGAGGCTGGAAGTTAAAGACTAGGATGTCAGCTGGGTTGGGTTCTGGTGAGGGCCCTCTTCTGGGTTGCAGATTGCTGTCTTCTCATTGTTTCTTCACATAGTGGAAAAAGGACAAGATTTTTTAAGATTCCTTTTTTATAAGGGCTCTAATGCCATTCATGAAGGCTCCACCCTCATGACATAATTACCTTTCAAATACTTCATCTCCTCATACTACCACTTTGAGGGGTAGAATTCTAGCATATGATTTTGGGAGTGTGGGGCACAACTATTCATTCCAATGCAGTCAATCTAGCTATAGGTTGTCAATTTTATTGATCTTATCACAAAGAAATAACTTTCAGTTTTGTTGATTTTCTCTTTTGATTTTATAGTCTTTATTTCATTTAGTTCTACTATAATTTTAATATTTTCTTTCCTAGCTTTTGTTTAGCTTAATATTTTTTCTAGTTTCTTAAGGTAGAAGGTTAGGTTATTGATATTTTTAATCTTATTTTTTAATATAGGCAT	ATAG	20	PASS	ClusterIDs=HG4_PB_pbsv_10999:HG2_Ill_tnscope_1234:HG3_PB_assemblyticsfalcon_2339:HG3_PB_SVrefine2PBcRDovetail_5130:HG3_PB_SVrefine2Falcon1Dovetail_6649:HG3_Ill_SVrefine2DISCOVARDovetail_8057:HG2_PB_SVrefine2PBcRplusDovetail_1047:HG2_PB_SVrefine2PB10Xhap12_8018:HG2_PB_SVrefine2Falcon1plusDovetail_1084:HG2_PB_PB10Xdip_4378:HG2_10X_SVrefine210Xhap12_7736:HG4_10X_allpass_2103:HG2_Ill_SpiralSDKrefine_1473:HG2_10X_allpass_1800:HG4_Ill_MetaSV_471:HG3_Ill_MetaSV_432:HG3_10X_allpass_2174:HG2_Ill_MetaSV_451:HG2_PB_assemblyticsfalcon_2342:HG2_PB_assemblyticsPBcR_2311:HG4_Ill_Krunchall_15225:HG2_Ill_Krunchall_14946:HG3_PB_pbsv_10708:HG2_PB_pbsv_10973;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7736:HG2_PB_PB10Xdip_4378:HG2_PB_SVrefine2Falcon1plusDovetail_1084:HG2_PB_SVrefine2PB10Xhap12_8018:HG2_PB_SVrefine2PBcRplusDovetail_1047:HG3_Ill_SVrefine2DISCOVARDovetail_8057:HG3_PB_SVrefine2Falcon1Dovetail_6649:HG3_PB_SVrefine2PBcRDovetail_5130:HG3_PB_assemblyticsfalcon_2339;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00449663;ClusterMaxSizeDiff=0.00449663;ClusterMaxEditDist=0.0059955;PBcalls=12;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-2000;DistBack=-520;DistForward=-2004;DistMin=-2004;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:4708519-4710522;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.999;PctRecOverlap=0.999;SizeDiff=-2;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=343.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:43:./.:28:21:16:10:0|1:55:0:0:41:0/1:63:26:0/1:129:89:2307:.:.
chr10	5522916	HG4_Ill_250bpfermikitraw_14549	GGGGCTCCGTCCTCACGGCTGGAGGGGCTCTCAGAACATCTGGTGGGCTCCGTCCTCACGGCTGGAGGGGCTCTCAGAACATCTGGT	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13755:HG3_PB_HySA_16558:HG2_PB_HySA_19865:HG4_PB_pbsv_11009:HG4_Ill_GATKHC_17623:HG4_Ill_GATKHCSBGrefine_7573:HG3_Ill_GATKHC_17498:HG3_Ill_GATKHCSBGrefine_7301:HG2_Ill_GATKHC_17568:HG2_Ill_GATKHCSBGrefine_7392:HG3_Ill_manta_2526:HG2_Ill_manta_3096:HG4_Ill_Spiral_892:HG3_Ill_Spiral_11441:HG2_Ill_Spiral_763:HG3_PB_pbsv_10714:HG2_PB_assemblyticsfalcon_2356:HG3_PB_assemblyticsfalcon_2351:HG2_PB_assemblyticsPBcR_2323:HG2_PB_pbsv_10982:HG4_PB_assemblyticsfalcon_2297:HG4_Ill_svaba_13761:HG4_Ill_Krunchall_15240:HG4_Ill_250bpfermikitraw_14549:HG3_Ill_svaba_13813:HG3_Ill_Krunchall_14660:HG3_Ill_250bpfermikitraw_14257:HG3_Ill_150bpfermikitraw_13789:HG3_10X_allpass_2176:HG2_Ill_svaba_13663:HG2_Ill_Krunchall_14960:HG2_Ill_250bpfermikitraw_14651;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13755:HG4_PB_assemblyticsfalcon_2297:HG4_Ill_svaba_13761:HG4_Ill_Krunchall_15240:HG4_Ill_250bpfermikitraw_14549:HG3_Ill_svaba_13813:HG3_Ill_Krunchall_14660:HG3_Ill_250bpfermikitraw_14257:HG3_Ill_150bpfermikitraw_13789:HG3_10X_allpass_2176:HG2_Ill_svaba_13663:HG2_Ill_Krunchall_14960:HG2_Ill_250bpfermikitraw_14651;NumExactMatchSVs=13;ClusterMaxShiftDist=0.240964;ClusterMaxSizeDiff=0.240964;ClusterMaxEditDist=0.240964;PBcalls=9;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-86;DistBack=45418;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=91;REFWIDENED=10:5522913-5523089;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=344.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:11:0:24:1/1:0:7:0:6:1/1:0:40:./.:.:.:.:.:.
chr10	5644119	HG2_Ill_SpiralSDKrefine_1482	CGAGGGGCCCACAGGAAGTCCGTCACCCTCCCAGGCCCGTCTGACGAGGGGCCCACAGGAAGTCTGTCACCCTCCCAGGCCCACCTGAT	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_14655:HG3_PB_SVrefine2Falcon1Dovetail_6650:HG4_PB_SVrefine2PBcRDovetail_5525:HG4_Ill_SVrefine2DISCOVARDovetail_7856:HG2_PB_SVrefine2Falcon2Bionano_5262:HG2_Ill_SVrefine2DISCOVARplusDovetail_1197:HG2_10X_SVrefine210Xhap12_7741:HG2_PB_HySA_19868:HG4_PB_pbsv_11013:HG2_PB_pbsv_10983:HG4_Ill_svaba_13767:HG4_Ill_Krunchall_15242:HG4_Ill_GATKHC_17627:HG4_Ill_GATKHCSBGrefine_7576:HG4_Ill_250bpfermikitraw_14554:HG2_Ill_svaba_13668:HG2_Ill_SpiralSDKrefine_1482:HG2_Ill_Krunchall_14963:HG2_Ill_GATKHC_17572:HG2_Ill_GATKHCSBGrefine_7394;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14655:HG4_Ill_svaba_13767:HG4_Ill_Krunchall_15242:HG4_Ill_GATKHC_17627:HG4_Ill_GATKHCSBGrefine_7576:HG4_Ill_250bpfermikitraw_14554:HG2_Ill_svaba_13668:HG2_Ill_SpiralSDKrefine_1482:HG2_Ill_Krunchall_14963:HG2_Ill_GATKHC_17572:HG2_Ill_GATKHCSBGrefine_7394;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0224719;ClusterMaxSizeDiff=0.0224719;ClusterMaxEditDist=0.158192;PBcalls=6;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=-88;DistBack=10621;DistForward=120;DistMin=120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=215;REFWIDENED=10:5644115-5644417;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=345.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:29:./.:27:13:7:11:0|1:28:1:1:15:0/1:23:14:./.:.:.:.:.:.
chr10	6097370	HG3_PB_SVrefine2PBcRDovetail_5136	CTTGGCCATCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACCGCCCTTAATCCATTTAATCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACCTCTCTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCCATTCCACAAAGCCGCCATTGTCATCCTGGCCCGCTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCCCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCCGACTCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7746:HG2_PB_assemblyticsfalcon_2366:HG2_PB_assemblyticsPBcR_2333:HG4_PB_assemblyticsfalcon_2308:HG3_PB_assemblyticsfalcon_2360:HG4_Ill_Krunchall_15246:HG3_Ill_Krunchall_14671:HG2_Ill_Krunchall_14970:HG4_Ill_Spiral_893:HG2_Ill_Spiral_764:HG3_PB_pbsv_10721:HG4_Ill_MetaSV_477:HG3_Ill_MetaSV_436:HG2_Ill_tnscope_1235:HG2_Ill_MetaSV_454:HG4_PB_pbsv_11018:HG4_PB_SVrefine2PBcRDovetail_5531:HG4_PB_SVrefine2Falcon1Dovetail_6746:HG4_Ill_manta_2639:HG4_Ill_SVrefine2DISCOVARDovetail_7860:HG4_Ill_GATKHCSBGrefine_7578:HG4_10X_allpass_2105:HG3_PB_SVrefine2PBcRDovetail_5136:HG3_PB_SVrefine2Falcon1Dovetail_6652:HG3_Ill_manta_2529:HG3_Ill_SVrefine2DISCOVARDovetail_8065:HG3_Ill_GATKHCSBGrefine_7306:HG3_10X_allpass_2178:HG2_PB_pbsv_10988:HG2_PB_SVrefine2PBcRplusDovetail_1053:HG2_PB_SVrefine2PB10Xhap12_8027:HG2_PB_SVrefine2Falcon2Bionano_5266:HG2_PB_SVrefine2Falcon1plusDovetail_1090:HG2_Ill_manta_3098:HG2_Ill_breakscan11_1591:HG2_Ill_SpiralSDKrefine_1486:HG2_Ill_SVrefine2DISCOVARplusDovetail_1201:HG2_Ill_GATKHCSBGrefine_7396:HG2_10X_allpass_1802;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7746:HG4_PB_pbsv_11018:HG4_PB_SVrefine2PBcRDovetail_5531:HG4_PB_SVrefine2Falcon1Dovetail_6746:HG4_Ill_manta_2639:HG4_Ill_SVrefine2DISCOVARDovetail_7860:HG4_Ill_GATKHCSBGrefine_7578:HG4_10X_allpass_2105:HG3_PB_SVrefine2PBcRDovetail_5136:HG3_PB_SVrefine2Falcon1Dovetail_6652:HG3_Ill_manta_2529:HG3_Ill_SVrefine2DISCOVARDovetail_8065:HG3_Ill_GATKHCSBGrefine_7306:HG3_10X_allpass_2178:HG2_PB_pbsv_10988:HG2_PB_SVrefine2PBcRplusDovetail_1053:HG2_PB_SVrefine2PB10Xhap12_8027:HG2_PB_SVrefine2Falcon2Bionano_5266:HG2_PB_SVrefine2Falcon1plusDovetail_1090:HG2_Ill_manta_3098:HG2_Ill_breakscan11_1591:HG2_Ill_SpiralSDKrefine_1486:HG2_Ill_SVrefine2DISCOVARplusDovetail_1201:HG2_Ill_GATKHCSBGrefine_7396:HG2_10X_allpass_1802;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0630722;ClusterMaxSizeDiff=0.0630722;ClusterMaxEditDist=0.0630722;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-498;DistBack=-499;DistForward=29837;DistMin=-499;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=10:6097371-6097884;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:0:10:0:12:1/1:0:22:0:16:1/1:0:49:0/1:2:12:.:.:.
chr10	6411563	HG4_PB_SVrefine2PBcRDovetail_5537	TCAGCAAATCATTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAGTGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTCTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCATGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGTATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCAGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCCTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCCTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCGTTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCAGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTTGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTTGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCACTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGGATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTGGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGATGCAGTCTGCCCGTTCTCAGATCTCCAGCTGAGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGCCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAACCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCATAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCC	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_438:HG2_PB_assemblyticsfalcon_2374:HG2_PB_assemblyticsPBcR_2338:HG4_10X_allpass_2107:HG3_10X_allpass_2179:HG2_10X_allpass_1804:HG4_PB_assemblyticsfalcon_2315:HG3_PB_assemblyticsfalcon_2365:HG3_PB_HySA_16576:HG2_Ill_tnscope_1236:HG4_PB_pbsv_11025:HG4_PB_SVrefine2PBcRDovetail_5537:HG4_PB_SVrefine2Falcon1Dovetail_6750:HG4_Ill_SVrefine2DISCOVARDovetail_7864:HG4_Ill_MetaSV_479:HG4_Ill_Krunchall_15253:HG4_Ill_GATKHCSBGrefine_7582:HG3_PB_pbsv_10726:HG3_PB_SVrefine2PBcRDovetail_5140:HG3_PB_SVrefine2Falcon1Dovetail_6657:HG3_Ill_SVrefine2DISCOVARDovetail_8068:HG3_Ill_Krunchall_14681:HG3_Ill_GATKHCSBGrefine_7309:HG2_PB_pbsv_10994:HG2_PB_SVrefine2PBcRplusDovetail_1057:HG2_PB_SVrefine2PB10Xhap12_8031:HG2_PB_SVrefine2Falcon2Bionano_5269:HG2_PB_SVrefine2Falcon1plusDovetail_1094:HG2_Ill_breakscan11_1592:HG2_Ill_SVrefine2DISCOVARplusDovetail_1205:HG2_Ill_MetaSV_456:HG2_Ill_Krunchall_14977:HG2_Ill_GATKHCSBGrefine_7399:HG2_10X_SVrefine210Xhap12_7751;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7751:HG2_Ill_GATKHCSBGrefine_7399:HG2_Ill_Krunchall_14977:HG2_Ill_MetaSV_456:HG2_Ill_SVrefine2DISCOVARplusDovetail_1205:HG2_Ill_breakscan11_1592:HG2_PB_SVrefine2Falcon1plusDovetail_1094:HG2_PB_SVrefine2Falcon2Bionano_5269:HG2_PB_SVrefine2PB10Xhap12_8031:HG2_PB_SVrefine2PBcRplusDovetail_1057:HG2_PB_pbsv_10994:HG3_Ill_GATKHCSBGrefine_7309:HG3_Ill_Krunchall_14681:HG3_Ill_SVrefine2DISCOVARDovetail_8068:HG3_PB_SVrefine2Falcon1Dovetail_6657:HG3_PB_SVrefine2PBcRDovetail_5140:HG3_PB_pbsv_10726:HG4_Ill_GATKHCSBGrefine_7582:HG4_Ill_Krunchall_15253:HG4_Ill_MetaSV_479:HG4_Ill_SVrefine2DISCOVARDovetail_7864:HG4_PB_SVrefine2Falcon1Dovetail_6750:HG4_PB_SVrefine2PBcRDovetail_5537:HG4_PB_pbsv_11025;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0553589;ClusterMaxSizeDiff=0.0553589;ClusterMaxEditDist=0.0553589;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-6066;DistBack=10109;DistForward=37806;DistMin=10109;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=10:6411564-6417646;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=347.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:113:1/1:0:28:0:25:1/1:0:25:0:15:1/1:0:33:1/1:0:448:6023:.:.
chr10	6837146	HG2_PB_SVrefine2PB10Xhap12_8032	CGCAGAAGGGTGGGAGGAGGGGGAGGCGCAGAAGGGTGGGAGGAGGGGGAGGCGCAGAAGGGTGGGAGGAGGGGGAGGCGCAGAAGGGTGGGAGGAGGGGGAGGCGCAGAAGGGTGGGAGGAGGGGGAGGC	A	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6751:HG2_PB_HySA_19896:HG4_PB_HySA_16069:HG3_PB_assemblyticsfalcon_2369:HG3_PB_SVrefine2Falcon1Dovetail_6658:HG2_PB_SVrefine2PBcRplusDovetail_1058:HG2_PB_SVrefine2PB10Xhap12_8032:HG2_PB_SVrefine2Falcon2Bionano_5270:HG2_PB_PB10Xdip_4506:HG2_PB_PB10Xdip_4505:HG2_PB_assemblyticsPBcR_2343:HG2_PB_assemblyticsfalcon_2378:HG2_PB_SVrefine2Falcon1plusDovetail_1095:HG4_Ill_GATKHC_17646:HG2_Ill_GATKHC_17592:HG3_PB_HySA_16580:HG3_PB_SVrefine2PBcRDovetail_5141:HG2_10X_SVrefine210Xhap12_7755:HG3_PB_pbsv_10728:HG4_PB_pbsv_11028:HG2_PB_pbsv_10997:HG3_Ill_SVrefine2DISCOVARDovetail_8069:HG2_10X_SVrefine210Xhap12_7754:HG4_PB_SVrefine2PBcRDovetail_5538;NumClusterSVs=24;ExactMatchIDs=HG2_PB_PB10Xdip_4505:HG2_PB_PB10Xdip_4506:HG2_PB_SVrefine2Falcon2Bionano_5270:HG2_PB_SVrefine2PB10Xhap12_8032:HG2_PB_SVrefine2PBcRplusDovetail_1058;NumExactMatchSVs=5;ClusterMaxShiftDist=0.275362;ClusterMaxSizeDiff=0.275362;ClusterMaxEditDist=0.275362;PBcalls=19;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-130;DistBack=6;DistForward=-74;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:6837172-6837276;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=0.4427;SizeDiff=0;StartDistance=73;EndDistance=73;GTMatch=0;TruScore=81;MatchId=348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:1:24:1:23:./.:0:3:0:6:./.:0:4:./.:.:.:.:.:.
chr10	6843859	HG4_Ill_GATKHC_17647	TTGCCCTGTCCCCAGAAAAGCAGAGAAGGGGTAGAGACAAGGAGAGAAGGGGTTGGGGTACG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13776:HG2_PB_pbsv_10998:HG4_PB_pbsv_11029:HG4_Ill_Krunchall_15256:HG4_Ill_GATKHC_17647:HG4_Ill_GATKHCSBGrefine_7585:HG4_Ill_250bpfermikitraw_14571:HG2_Ill_svaba_13685:HG2_Ill_Krunchall_14982:HG2_Ill_GATKHC_17593:HG2_Ill_GATKHCSBGrefine_7401:HG2_Ill_250bpfermikitraw_14674;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13776:HG4_Ill_Krunchall_15256:HG4_Ill_GATKHC_17647:HG4_Ill_GATKHCSBGrefine_7585:HG4_Ill_250bpfermikitraw_14571:HG2_Ill_svaba_13685:HG2_Ill_Krunchall_14982:HG2_Ill_GATKHC_17593:HG2_Ill_GATKHCSBGrefine_7401:HG2_Ill_250bpfermikitraw_14674;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0162602;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.0163934;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-61;DistBack=6655;DistForward=41;DistMin=41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=163;REFWIDENED=10:6843778-6844001;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=349.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:16:./.:21:4:8:10:./.:0:4:11:2:0/1:14:13:./.:.:.:.:.:.
chr10	7077041	HG2_PB_SVrefine2Falcon1plusDovetail_1099	TGTGTGTGTAGGAAGGATGTATTACTTTGTTCTCACATTTCTAATAAAGACATACCTGAGACTACATAATTTATAAAGGGAAGAGGTTTAACTGACTCACAGTTCCACCGTGCTGGGGCGGCCTCAGGAAACTTACAATCATGATGGAAGGCACCTCTTTAGAAGGCAGCAGGAGAGAGAATGAGTGCCTAGCTAAGGGGAAACCCCTTATAAAACCATCAGATCTCATGAGAACTCATTATCATGAGAACAGGATGGGGGAAACCACACCCATGATTCAATTATCTCCACCTAGTCCCTCCTGCGGCGCGTGGGGATTATGGGAACTACAATTCAAGATGAGATTTAGGTGTGAAAACAGCCAATTCTTTCTCCCCACAGATGTGGTGGGGACAAACCGTATCAGATGTATCCAGAAAGAAGAGGAAATTAGACTGCACAAAGAGGAAAGAGAATGAAAGACACAGCTAACAAGGCTCAGACAAACTGAATGCCAACCAGAGTCAGCTCTGGCTGCTTGAGATGGCGAAACGGTCCCTCAACCACACTGTGGCTCTCTCTTGGGTCAGTCTGTGCACAGAGACCTGGGTGTGCAGGTTGGTAGACAGGGGTTCACACAAGCAGACATCGAGGCAGAAGAGGCCACTTTCTCACCCTCGTCCCATACCCCTCCTTCCCTACTCCAAGTTTGAACTGTTTTCAAACTATTTGCCTTCTAGGCAACCTTGATGTCCATTTTAATTTCTTTGCACCTTGCAAAACGTTAATGGTTTTCAAAAAGGCACAGGCCCCATTTGATTTCTCTCTGGAGCTGCTTTCCTCGGATCTGTGCTGTTGCAGCCTTCATTGCAGCCAAGTGATGCTCATTTTCATTTCCACCTCGTGGCATCTGCTTGGCCATATACTTACCCCTCATCTCGGTAAAAACTGGTTACACATGTAATCAAGATTTTGGAGCAAGACCTTTCCCATGTGTCCACAATAGTGGATTGGAGGGGCAATAATGAGAAGGAGATTAGTTGTTCTTTATTATAGCACTGAAGATAAATCAAAGATGGATACATCCGACTGCATCGGAACTATGAAAGTCTGTAAATGAAAAGTCATTAAGACTGTTACAATGAAAGCCACAAAGTGGGGAAAGATAGTTGCAATGTATGCATCTGACTAAAGGCTTGTCTCCAGAATATATGAAGTCAATCCTACAAATAAATCCATGAGAAAGCCATCCCAATCTTTAAAAGTGGGCAAAAGGCTCAAG	A	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6755:HG3_Ill_GATKHCSBGrefine_7315:HG2_Ill_GATKHCSBGrefine_7405:HG2_PB_pbsv_11006:HG2_Ill_tnscope_1237:HG2_Ill_breakscan11_1593:HG2_Ill_SpiralSDKrefine_1499:HG3_PB_SVrefine2PBcRDovetail_5145:HG3_Ill_SVrefine2DISCOVARDovetail_8074:HG2_PB_SVrefine2PBcRplusDovetail_1063:HG2_PB_SVrefine2PB10Xhap12_8038:HG2_PB_SVrefine2Falcon2Bionano_5273:HG2_PB_SVrefine2Falcon1plusDovetail_1099:HG2_10X_SVrefine210Xhap12_7758:HG3_Ill_MetaSV_440:HG2_Ill_MetaSV_459:HG2_PB_assemblyticsfalcon_2386:HG2_PB_assemblyticsPBcR_2352:HG3_10X_allpass_2181:HG2_10X_allpass_1806:HG3_PB_assemblyticsfalcon_2377:HG3_PB_SVrefine2Falcon1Dovetail_6662:HG3_PB_pbsv_10733:HG3_Ill_Krunchall_14698:HG2_Ill_Krunchall_14990:HG4_PB_assemblyticsfalcon_2327;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7758:HG2_PB_SVrefine2Falcon1plusDovetail_1099:HG2_PB_SVrefine2Falcon2Bionano_5273:HG2_PB_SVrefine2PB10Xhap12_8038:HG2_PB_SVrefine2PBcRplusDovetail_1063:HG3_Ill_SVrefine2DISCOVARDovetail_8074:HG3_PB_SVrefine2PBcRDovetail_5145;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00874404;ClusterMaxSizeDiff=0.00874404;ClusterMaxEditDist=0.00874404;PBcalls=13;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1260;DistBack=-1080;DistForward=-180;DistMin=-1080;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:7077041-7078301;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9992;PctRecOverlap=0.9984;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:24:./.:13:6:2:16:0|1:69:0:0:31:0/1:63:16:0/1:110:44:1193:.:.
chr10	7639490	HG4_Ill_150bpfermikitraw_13952	ATACACAGCATGGTCCCAAGTCACCTTGGAGTCACCCCCTCTGTACCCCAGAGACACCCG	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_2354:HG4_PB_HySA_16077:HG3_PB_assemblyticsfalcon_2385:HG4_PB_pbsv_11041:HG3_PB_pbsv_10738:HG2_PB_assemblyticsfalcon_2391:HG4_PB_assemblyticsfalcon_2332:HG4_Ill_Krunchall_15266:HG4_Ill_GATKHCSBGrefine_7593:HG4_Ill_250bpfermikitraw_14582:HG4_Ill_150bpfermikitraw_13952:HG3_PB_HySA_16593:HG3_Ill_Krunchall_14705:HG3_Ill_GATKHCSBGrefine_7320:HG3_Ill_250bpfermikitraw_14292:HG3_Ill_150bpfermikitraw_13826:HG2_Ill_SpiralSDKrefine_1502:HG2_Ill_GATKHC_17612:HG2_Ill_GATKHCSBGrefine_7411:HG2_Ill_250bpfermikitraw_14689:HG2_PB_pbsv_11010;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14689:HG2_Ill_GATKHCSBGrefine_7411:HG2_Ill_GATKHC_17612:HG2_Ill_SpiralSDKrefine_1502:HG3_Ill_150bpfermikitraw_13826:HG3_Ill_250bpfermikitraw_14292:HG3_Ill_GATKHCSBGrefine_7320:HG3_Ill_Krunchall_14705:HG3_PB_HySA_16593:HG4_Ill_150bpfermikitraw_13952:HG4_Ill_250bpfermikitraw_14582:HG4_Ill_GATKHCSBGrefine_7593:HG4_Ill_Krunchall_15266:HG4_PB_assemblyticsfalcon_2332;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.0689655;PBcalls=9;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=482;DistForward=27207;DistMin=482;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=118;REFWIDENED=10:7639466-7639642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=351.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:3:22:1:27:./.:0:7:0:3:1/1:0:29:./.:.:.:.:.:.
chr10	7671248	HG2_PB_pbsv_11012	CCCTGTTGTAGCGTGTGTCCATGTTGTAGCGTGTGCCCATGTTGTAGCGTGTG	C	20	PASS	ClusterIDs=HG2_PB_pbsv_11012:HG2_Ill_GATKHC_17615;NumClusterSVs=2;ExactMatchIDs=HG2_PB_pbsv_11012;NumExactMatchSVs=1;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0740741;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-52;DistBack=8;DistForward=31;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=410;REFWIDENED=10:7671153-7671614;PctSeqSimilarity=0.977;PctSizeSimilarity=0.963;PctRecOverlap=0.3273;SizeDiff=-2;StartDistance=-35;EndDistance=-37;GTMatch=0;TruScore=75;MatchId=352.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:34:0|1:30:4:8:30:0/0:58:1:22:1:0/1:16:3:./.:.:.:.:.:.
chr10	7709103	HG2_Ill_GATKHC_17619	GGTCCCCTCCTGGACTCCGCCCACCCCACGGACCCAGCCCGGACCCCGCCCACCCCACGGACCCAGCCCGGACCCCGCCCACCCCGCGTCCCAGCCCGGACCCCGCCCACCCCACGGACCCAGCCCGGACCCCGCCCACCCTGC	G	20	PASS	ClusterIDs=HG2_PB_pbsv_11013:HG2_PB_assemblyticsPBcR_2356:HG2_PB_assemblyticsfalcon_2393:HG4_Ill_GATKHC_17662:HG4_Ill_GATKHCSBGrefine_7594:HG4_Ill_150bpfermikitraw_13956:HG3_Ill_GATKHC_17547:HG3_Ill_GATKHCSBGrefine_7322:HG2_Ill_GATKHC_17619:HG2_Ill_GATKHCSBGrefine_7414:HG2_PB_HySA_19911:HG3_PB_SVrefine2PBcRDovetail_5149:HG3_Ill_SVrefine2DISCOVARDovetail_8079:HG2_PB_SVrefine2PBcRplusDovetail_1066:HG2_PB_SVrefine2PB10Xhap12_8043:HG2_PB_SVrefine2Falcon1plusDovetail_1104:HG2_Ill_SVrefine2DISCOVARplusDovetail_1220:HG2_10X_SVrefine210Xhap12_7759:HG4_PB_pbsv_11043:HG3_PB_pbsv_10740;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7414:HG2_Ill_GATKHC_17619:HG3_Ill_GATKHCSBGrefine_7322:HG3_Ill_GATKHC_17547:HG4_Ill_150bpfermikitraw_13956:HG4_Ill_GATKHCSBGrefine_7594:HG4_Ill_GATKHC_17662;NumExactMatchSVs=7;ClusterMaxShiftDist=0.188679;ClusterMaxSizeDiff=0.188679;ClusterMaxEditDist=0.213836;PBcalls=10;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=-143;DistBack=55;DistForward=332;DistMin=55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=220;REFWIDENED=10:7708945-7709307;PctSeqSimilarity=0.7945;PctSizeSimilarity=0.8266;PctRecOverlap=0.5;SizeDiff=-30;StartDistance=87;EndDistance=57;GTMatch=0;TruScore=70;MatchId=353.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:3:27:1/1:0:10:1:16:./.:0:2:0:8:./.:1:3:./.:.:.:.:.:.
chr10	7793817	HG2_PB_SVrefine2PB10Xhap12_8045	TAAAAGTAACGATGTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_15001:HG3_PB_assemblyticsfalcon_2393:HG2_PB_assemblyticsPBcR_2361:HG4_PB_assemblyticsfalcon_2339:HG2_PB_assemblyticsfalcon_2402:HG4_PB_HySA_16087:HG4_PB_pbsv_11047:HG3_PB_pbsv_10744:HG2_PB_pbsv_11016:HG3_PB_SVrefine2Falcon1Dovetail_6670:HG4_Ill_MetaSV_483:HG3_Ill_MetaSV_444:HG2_PB_HySA_19916:HG2_Ill_tnscope_1238:HG2_Ill_MetaSV_462:HG4_PB_SVrefine2PBcRDovetail_5547:HG4_Ill_scalpel_10105:HG4_Ill_SVrefine2DISCOVARDovetail_7876:HG4_Ill_GATKHCSBGrefine_7599:HG4_10X_allpass_2109:HG3_PB_SVrefine2PBcRDovetail_5151:HG3_Ill_scalpel_10525:HG3_Ill_manta_2531:HG3_Ill_SVrefine2DISCOVARDovetail_8081:HG3_Ill_GATKHCSBGrefine_7328:HG3_10X_allpass_2182:HG2_PB_SVrefine2PBcRplusDovetail_1067:HG2_PB_SVrefine2PB10Xhap12_8045:HG2_PB_SVrefine2Falcon2Bionano_5280:HG2_PB_SVrefine2Falcon1plusDovetail_1106:HG2_Ill_scalpel_10381:HG2_Ill_manta_3102:HG2_Ill_SVrefine2DISCOVARplusDovetail_1223:HG2_Ill_GATKHCSBGrefine_7419:HG2_10X_SVrefine210Xhap12_7761:HG4_Ill_Spiral_895:HG3_Ill_Spiral_11473:HG2_Ill_Spiral_767:HG3_Ill_MetaSV_443:HG2_Ill_MetaSV_461:HG4_Ill_Krunchall_15275:HG3_Ill_Krunchall_14713:HG2_Ill_Krunchall_15002:HG4_Ill_Krunchall_15274:HG3_Ill_Krunchall_14712;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7761:HG2_Ill_GATKHCSBGrefine_7419:HG2_Ill_SVrefine2DISCOVARplusDovetail_1223:HG2_Ill_manta_3102:HG2_Ill_scalpel_10381:HG2_PB_SVrefine2Falcon1plusDovetail_1106:HG2_PB_SVrefine2Falcon2Bionano_5280:HG2_PB_SVrefine2PB10Xhap12_8045:HG2_PB_SVrefine2PBcRplusDovetail_1067:HG3_10X_allpass_2182:HG3_Ill_GATKHCSBGrefine_7328:HG3_Ill_SVrefine2DISCOVARDovetail_8081:HG3_Ill_manta_2531:HG3_Ill_scalpel_10525:HG3_PB_SVrefine2PBcRDovetail_5151:HG4_10X_allpass_2109:HG4_Ill_GATKHCSBGrefine_7599:HG4_Ill_SVrefine2DISCOVARDovetail_7876:HG4_Ill_scalpel_10105:HG4_PB_SVrefine2PBcRDovetail_5547;NumExactMatchSVs=20;ClusterMaxShiftDist=0.230435;ClusterMaxSizeDiff=0.230435;ClusterMaxEditDist=0.230435;PBcalls=16;Illcalls=26;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-221;DistBack=3332;DistForward=14960;DistMin=3332;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=10:7793818-7794051;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=354.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:0:20:1:22:1/1:0:35:0:38:1/1:0:42:./.:.:.:.:.:.
chr10	9436189	HG2_CG_vcfBeta_6241	GGGTGACTTACTAAACAACATGAATTTATCTCTCACTCTTCTGGATGCTGGAAGTCCCAAGAT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_11031:HG4_PB_HySA_16111:HG2_PB_HySA_19945:HG4_Ill_svaba_13810:HG4_Ill_scalpel_10121:HG4_Ill_Krunchall_15298:HG4_Ill_GATKHC_17696:HG4_Ill_GATKHCSBGrefine_7607:HG4_Ill_Cortex_343:HG4_Ill_250bpfermikitraw_14610:HG4_Ill_150bpfermikitraw_13983:HG4_CG_vcfBeta_7015:HG4_10X_allpass_2112:HG3_PB_assemblyticsfalcon_2416:HG2_PB_assemblyticsfalcon_2430:HG2_PB_assemblyticsPBcR_2389:HG2_Ill_svaba_13723:HG2_Ill_scalpel_10397:HG2_Ill_manta_3107:HG2_Ill_breakscan11_1595:HG2_Ill_SpiralSDKrefine_1519:HG2_Ill_Krunchall_15027:HG2_Ill_GATKHC_17651:HG2_Ill_GATKHCSBGrefine_7431:HG2_Ill_Cortex_734:HG2_Ill_250bpfermikitraw_14724:HG2_Ill_150bpfermikitraw_13825:HG2_CG_vcfBeta_6241:HG2_10X_allpass_1809:HG4_PB_pbsv_11062;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_1809:HG2_CG_vcfBeta_6241:HG2_Ill_150bpfermikitraw_13825:HG2_Ill_250bpfermikitraw_14724:HG2_Ill_Cortex_734:HG2_Ill_GATKHCSBGrefine_7431:HG2_Ill_GATKHC_17651:HG2_Ill_Krunchall_15027:HG2_Ill_SpiralSDKrefine_1519:HG2_Ill_breakscan11_1595:HG2_Ill_manta_3107:HG2_Ill_scalpel_10397:HG2_Ill_svaba_13723:HG2_PB_assemblyticsPBcR_2389:HG2_PB_assemblyticsfalcon_2430:HG3_PB_assemblyticsfalcon_2416:HG4_10X_allpass_2112:HG4_CG_vcfBeta_7015:HG4_Ill_150bpfermikitraw_13983:HG4_Ill_250bpfermikitraw_14610:HG4_Ill_Cortex_343:HG4_Ill_GATKHCSBGrefine_7607:HG4_Ill_GATKHC_17696:HG4_Ill_Krunchall_15298:HG4_Ill_scalpel_10121:HG4_Ill_svaba_13810;NumExactMatchSVs=26;ClusterMaxShiftDist=0.048;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.144;PBcalls=7;Illcalls=19;TenXcalls=2;CGcalls=2;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=2;HG2count=17;HG3count=1;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-62;DistBack=29455;DistForward=1956;DistMin=1956;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=10:9436188-9436252;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:34:0|1:25:3:1:22:1|0:0:15:15:1:0/1:24:24:./.:.:.:.:.:.
chr10	9449743	HG2_Ill_250bpfermikitraw_14725	TGGTCCTACACACAGAGCGCCTCAGCGGGATCCTGGTTGGAGAGCGCCTCAGCGG	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_14725:HG2_PB_assemblyticsPBcR_2391:HG2_PB_pbsv_11033:HG3_PB_pbsv_10762:HG2_PB_HySA_19947:HG3_Ill_250bpfermikitraw_14321;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_14725:HG3_Ill_250bpfermikitraw_14321;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.037037;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=108;DistForward=33;DistMin=33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=135;REFWIDENED=10:9449742-9449933;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=356.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:51:1/1:3:32:1:12:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr10	9519815	HG3_Ill_scalpel_10539	TGACTGCATTTCTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1119:HG4_Ill_Krunchall_15302:HG3_Ill_Krunchall_14740:HG2_Ill_Krunchall_15031:HG4_Ill_Spiral_897:HG2_PB_pbsv_11037:HG4_PB_pbsv_11068:HG2_PB_HySA_19952:HG3_PB_pbsv_10765:HG4_PB_HySA_16119:HG4_Ill_MetaSV_492:HG3_Ill_MetaSV_449:HG2_Ill_tnscope_1239:HG2_Ill_MetaSV_469:HG4_PB_SVrefine2PBcRDovetail_5561:HG4_Ill_scalpel_10122:HG4_Ill_manta_2645:HG4_Ill_SVrefine2DISCOVARDovetail_7885:HG4_10X_allpass_2114:HG3_PB_SVrefine2PBcRDovetail_5162:HG3_PB_HySA_16625:HG3_Ill_scalpel_10539:HG3_Ill_manta_2535:HG3_Ill_SVrefine2DISCOVARDovetail_8089:HG3_10X_allpass_2185:HG2_PB_assemblyticsPBcR_2394:HG2_PB_SVrefine2PBcRplusDovetail_1080:HG2_PB_SVrefine2PB10Xhap12_8060:HG2_PB_SVrefine2Falcon2Bionano_5292:HG2_Ill_scalpel_10398:HG2_Ill_manta_3109:HG2_Ill_SpiralSDKrefine_1522:HG2_Ill_SVrefine2DISCOVARplusDovetail_1231:HG2_10X_SVrefine210Xhap12_7771:HG2_Ill_breakscan11_1598:HG3_Ill_Spiral_11495:HG2_Ill_Spiral_768:HG3_PB_SVrefine2Falcon1Dovetail_6683;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7771:HG2_Ill_SVrefine2DISCOVARplusDovetail_1231:HG2_Ill_SpiralSDKrefine_1522:HG2_Ill_manta_3109:HG2_Ill_scalpel_10398:HG2_PB_SVrefine2Falcon2Bionano_5292:HG2_PB_SVrefine2PB10Xhap12_8060:HG2_PB_SVrefine2PBcRplusDovetail_1080:HG2_PB_assemblyticsPBcR_2394:HG3_10X_allpass_2185:HG3_Ill_SVrefine2DISCOVARDovetail_8089:HG3_Ill_manta_2535:HG3_Ill_scalpel_10539:HG3_PB_HySA_16625:HG3_PB_SVrefine2PBcRDovetail_5162:HG4_10X_allpass_2114:HG4_Ill_SVrefine2DISCOVARDovetail_7885:HG4_Ill_manta_2645:HG4_Ill_scalpel_10122:HG4_PB_SVrefine2PBcRDovetail_5561;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00651466;ClusterMaxSizeDiff=0.00651466;ClusterMaxEditDist=0.00653595;PBcalls=14;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=-307;DistForward=-294;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=10:9519812-9520134;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=357.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:2:20:1:25:1/1:0:26:0:29:1/1:0:22:./.:1:14:.:.:.
chr10	10150346	HG3_Ill_Krunchall_14747	TCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACAC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_10772:HG4_PB_HySA_16125:HG3_PB_HySA_16637:HG2_PB_HySA_19962:HG2_PB_PB10Xdip_2897:HG4_PB_assemblyticsfalcon_2380:HG4_Ill_svaba_13817:HG4_Ill_Krunchall_15308:HG4_Ill_GATKHC_17712:HG4_Ill_GATKHCSBGrefine_7614:HG4_Ill_250bpfermikitraw_14619:HG4_Ill_150bpfermikitraw_13990:HG4_CG_vcfBeta_7018:HG4_10X_allpass_2115:HG3_PB_assemblyticsfalcon_2431:HG3_Ill_svaba_13879:HG3_Ill_Krunchall_14747:HG3_Ill_GATKHC_17590:HG3_Ill_GATKHCSBGrefine_7339:HG3_Ill_250bpfermikitraw_14329:HG3_Ill_150bpfermikitraw_13865:HG3_CG_vcfBeta_5944:HG3_10X_allpass_2186:HG2_PB_assemblyticsfalcon_2441:HG2_Ill_svaba_13731:HG2_Ill_scalpel_10403:HG2_Ill_Krunchall_15036:HG2_Ill_GATKHC_17663:HG2_Ill_GATKHCSBGrefine_7435:HG2_Ill_250bpfermikitraw_14735:HG2_Ill_150bpfermikitraw_13834:HG2_CG_vcfBeta_6243:HG2_PB_pbsv_11043:HG4_PB_pbsv_11073;NumClusterSVs=34;ExactMatchIDs=HG2_CG_vcfBeta_6243:HG2_Ill_150bpfermikitraw_13834:HG2_Ill_250bpfermikitraw_14735:HG2_Ill_GATKHCSBGrefine_7435:HG2_Ill_GATKHC_17663:HG2_Ill_Krunchall_15036:HG2_Ill_scalpel_10403:HG2_Ill_svaba_13731:HG2_PB_assemblyticsfalcon_2441:HG3_10X_allpass_2186:HG3_CG_vcfBeta_5944:HG3_Ill_150bpfermikitraw_13865:HG3_Ill_250bpfermikitraw_14329:HG3_Ill_GATKHCSBGrefine_7339:HG3_Ill_GATKHC_17590:HG3_Ill_Krunchall_14747:HG3_Ill_svaba_13879:HG3_PB_assemblyticsfalcon_2431:HG4_10X_allpass_2115:HG4_CG_vcfBeta_7018:HG4_Ill_150bpfermikitraw_13990:HG4_Ill_250bpfermikitraw_14619:HG4_Ill_GATKHCSBGrefine_7614:HG4_Ill_GATKHC_17712:HG4_Ill_Krunchall_15308:HG4_Ill_svaba_13817:HG4_PB_assemblyticsfalcon_2380;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0759494;ClusterMaxSizeDiff=0.0759494;ClusterMaxEditDist=0.101911;PBcalls=10;Illcalls=19;TenXcalls=2;CGcalls=3;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=3;HG2count=12;HG3count=11;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-78;DistBack=14987;DistForward=23390;DistMin=14987;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=10:10150347-10150426;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:28:0|1:28:0:1:32:0|1:28:0:0:16:0/1:28:25:./.:.:.:.:.:.
chr10	10493409	HG2_Ill_breakscan11_1600	TGTTCTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCGGGGCCACAGGCACCGACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7441:HG2_10X_allpass_1812:HG4_PB_assemblyticsfalcon_2384:HG2_PB_assemblyticsfalcon_2445:HG2_PB_assemblyticsPBcR_2405:HG2_PB_SVrefine2PB10Xhap12_8066:HG2_PB_PB10Xdip_2899:HG2_PB_PB10Xdip_2898:HG4_Ill_Krunchall_15312:HG2_Ill_tnscope_1240:HG4_PB_pbsv_11077:HG4_PB_SVrefine2PBcRDovetail_5564:HG4_Ill_manta_2649:HG4_Ill_SVrefine2DISCOVARDovetail_7889:HG4_Ill_MetaSV_495:HG4_Ill_GATKHCSBGrefine_7623:HG4_10X_allpass_2118:HG3_PB_assemblyticsfalcon_2434:HG3_PB_SVrefine2Falcon1Dovetail_6688:HG2_PB_pbsv_11047:HG2_PB_SVrefine2PBcRplusDovetail_1083:HG2_PB_SVrefine2PB10Xhap12_8065:HG2_PB_SVrefine2Falcon2Bionano_5296:HG2_PB_SVrefine2Falcon1plusDovetail_1124:HG2_Ill_breakscan11_1600:HG2_Ill_SVrefine2DISCOVARplusDovetail_1237:HG2_Ill_MetaSV_475;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7441:HG2_PB_PB10Xdip_2898:HG4_PB_pbsv_11077:HG4_PB_SVrefine2PBcRDovetail_5564:HG4_Ill_manta_2649:HG4_Ill_SVrefine2DISCOVARDovetail_7889:HG4_Ill_MetaSV_495:HG4_Ill_GATKHCSBGrefine_7623:HG4_10X_allpass_2118:HG3_PB_assemblyticsfalcon_2434:HG3_PB_SVrefine2Falcon1Dovetail_6688:HG2_PB_pbsv_11047:HG2_PB_SVrefine2PBcRplusDovetail_1083:HG2_PB_SVrefine2PB10Xhap12_8065:HG2_PB_SVrefine2Falcon2Bionano_5296:HG2_PB_SVrefine2Falcon1plusDovetail_1124:HG2_Ill_breakscan11_1600:HG2_Ill_SVrefine2DISCOVARplusDovetail_1237:HG2_Ill_MetaSV_475;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0594679;ClusterMaxSizeDiff=0.0594679;ClusterMaxEditDist=0.0594679;PBcalls=15;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=4526;DistForward=-322;DistMin=-322;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=10:10493410-10493742;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:34:0|1:34:0:0:30:1|0:0:32:73:0:0/1:40:21:0/1:34:9:.:.:.
chr10	10708535	HG3_Ill_scalpel_10548	TAAGAAAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7776:HG4_Ill_GATKHCSBGrefine_7625:HG3_Ill_GATKHCSBGrefine_7347:HG2_Ill_GATKHCSBGrefine_7443:HG3_Ill_Krunchall_14750:HG4_Ill_manta_2650:HG3_Ill_manta_2537:HG2_Ill_manta_3111:HG2_PB_pbsv_11048:HG2_PB_assemblyticsfalcon_2446:HG2_PB_assemblyticsPBcR_2406:HG4_PB_assemblyticsfalcon_2385:HG3_PB_assemblyticsfalcon_2435:HG4_Ill_MetaSV_496:HG3_Ill_MetaSV_454:HG2_PB_HySA_19968:HG2_Ill_tnscope_1241:HG2_Ill_MetaSV_476:HG4_PB_pbsv_11078:HG4_PB_SVrefine2PBcRDovetail_5565:HG4_Ill_SVrefine2DISCOVARDovetail_7891:HG4_10X_allpass_2119:HG3_PB_pbsv_10775:HG3_PB_SVrefine2PBcRDovetail_5168:HG3_PB_SVrefine2Falcon1Dovetail_6689:HG3_PB_HySA_16641:HG3_Ill_scalpel_10548:HG3_Ill_SVrefine2DISCOVARDovetail_8098:HG3_10X_allpass_2188:HG2_PB_SVrefine2PBcRplusDovetail_1084:HG2_PB_SVrefine2PB10Xhap12_8067:HG2_PB_SVrefine2Falcon2Bionano_5297:HG2_PB_SVrefine2Falcon1plusDovetail_1125:HG2_Ill_scalpel_10408:HG2_Ill_SVrefine2DISCOVARplusDovetail_1238:HG2_10X_allpass_1813;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7776:HG4_PB_pbsv_11078:HG4_PB_SVrefine2PBcRDovetail_5565:HG4_Ill_SVrefine2DISCOVARDovetail_7891:HG4_10X_allpass_2119:HG3_PB_pbsv_10775:HG3_PB_SVrefine2PBcRDovetail_5168:HG3_PB_SVrefine2Falcon1Dovetail_6689:HG3_PB_HySA_16641:HG3_Ill_scalpel_10548:HG3_Ill_SVrefine2DISCOVARDovetail_8098:HG3_10X_allpass_2188:HG2_PB_SVrefine2PBcRplusDovetail_1084:HG2_PB_SVrefine2PB10Xhap12_8067:HG2_PB_SVrefine2Falcon2Bionano_5297:HG2_PB_SVrefine2Falcon1plusDovetail_1125:HG2_Ill_scalpel_10408:HG2_Ill_SVrefine2DISCOVARplusDovetail_1238:HG2_10X_allpass_1813;NumExactMatchSVs=19;ClusterMaxShiftDist=0.109091;ClusterMaxSizeDiff=0.109091;ClusterMaxEditDist=0.109091;PBcalls=16;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=5;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=17212;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=10:10708536-10708860;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:1:24:0:32:1/1:0:35:0:35:1/1:0:45:0/1:4:11:.:.:.
chr10	11484966	HG3_PB_SVrefine2Falcon1Dovetail_6696	ATGTTACCACCGGAGCACTCTTCACCCAAGAAGATCATGGAAACACAGGTCAAATAAGGTGTGGAAAACACCACGTATAGTTTTGGACGTGCACAGCGAGGCAGCATATTGAAGGTGCTGAGAAGTCCTGTTTACAACAAAAACAGAAATCTGCTCACCTTTGCTCAGTTTCCAAATTTGAC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_11057:HG2_PB_HySA_19981:HG3_Ill_Krunchall_14755:HG2_Ill_Krunchall_15043:HG4_PB_assemblyticsfalcon_2393:HG3_PB_assemblyticsfalcon_2445:HG3_PB_HySA_16657:HG2_Ill_MetaSV_477:HG3_PB_pbsv_10783:HG3_PB_SVrefine2PBcRDovetail_5175:HG3_PB_SVrefine2Falcon1Dovetail_6696:HG3_Ill_svaba_13886:HG3_Ill_scalpel_10553:HG3_Ill_manta_2538:HG3_Ill_SVrefine2DISCOVARDovetail_8101:HG3_Ill_MetaSV_456:HG3_Ill_GATKHCSBGrefine_7349:HG3_Ill_Cortex_357:HG3_Ill_250bpfermikitraw_14338:HG3_CG_vcfBeta_5947:HG3_10X_allpass_2190:HG2_PB_assemblyticsfalcon_2454:HG2_PB_SVrefine2Falcon2Bionano_5304:HG2_PB_SVrefine2Falcon1plusDovetail_1133:HG2_Ill_svaba_13741:HG2_Ill_manta_3112:HG2_Ill_SpiralSDKrefine_1535:HG2_Ill_SVrefine2DISCOVARplusDovetail_1242:HG2_Ill_GATKHCSBGrefine_7444:HG2_Ill_Cortex_744:HG2_10X_SVrefine210Xhap12_7778;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7778:HG2_Ill_Cortex_744:HG2_Ill_GATKHCSBGrefine_7444:HG2_Ill_SVrefine2DISCOVARplusDovetail_1242:HG2_Ill_SpiralSDKrefine_1535:HG2_Ill_manta_3112:HG2_Ill_svaba_13741:HG2_PB_SVrefine2Falcon1plusDovetail_1133:HG2_PB_SVrefine2Falcon2Bionano_5304:HG2_PB_assemblyticsfalcon_2454:HG3_10X_allpass_2190:HG3_CG_vcfBeta_5947:HG3_Ill_250bpfermikitraw_14338:HG3_Ill_Cortex_357:HG3_Ill_GATKHCSBGrefine_7349:HG3_Ill_MetaSV_456:HG3_Ill_SVrefine2DISCOVARDovetail_8101:HG3_Ill_manta_2538:HG3_Ill_scalpel_10553:HG3_Ill_svaba_13886:HG3_PB_SVrefine2Falcon1Dovetail_6696:HG3_PB_SVrefine2PBcRDovetail_5175:HG3_PB_pbsv_10783;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0275482;ClusterMaxSizeDiff=0.0275482;ClusterMaxEditDist=0.0277008;PBcalls=11;Illcalls=17;TenXcalls=2;CGcalls=1;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=1;HG2count=14;HG3count=16;HG4count=1;NumTechs=4;NumTechsExact=4;SVLEN=-181;DistBack=73256;DistForward=40399;DistMin=40399;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=10:11484967-11485150;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:23:0|1:28:2:0:20:0|1:30:0:0:8:0/1:41:19:./.:.:.:.:.:.
chr10	11556162	HG2_Ill_Krunchall_15044	AGGGCGCATATCATGTTCCTTAACAACTCTACCCAATGGTCTCATCATCCGTTGATGATTCCTACCTGAATCAATTATG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7779:HG2_PB_assemblyticsfalcon_2455:HG4_PB_HySA_16133:HG4_Ill_Spiral_899:HG2_PB_pbsv_11058:HG4_PB_pbsv_11086:HG4_Ill_svaba_13828:HG4_Ill_scalpel_10135:HG4_Ill_manta_2651:HG4_Ill_SVrefine2DISCOVARDovetail_7898:HG4_Ill_Krunchall_15316:HG4_Ill_GATKHCSBGrefine_7626:HG4_Ill_250bpfermikitraw_14626:HG4_Ill_150bpfermikitraw_14001:HG2_Ill_svaba_13742:HG2_Ill_scalpel_10412:HG2_Ill_manta_3113:HG2_Ill_SpiralSDKrefine_1536:HG2_Ill_Krunchall_15044:HG2_Ill_GATKHCSBGrefine_7445:HG2_Ill_250bpfermikitraw_14743;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7779:HG4_Ill_svaba_13828:HG4_Ill_scalpel_10135:HG4_Ill_manta_2651:HG4_Ill_SVrefine2DISCOVARDovetail_7898:HG4_Ill_Krunchall_15316:HG4_Ill_GATKHCSBGrefine_7626:HG4_Ill_250bpfermikitraw_14626:HG4_Ill_150bpfermikitraw_14001:HG2_Ill_svaba_13742:HG2_Ill_scalpel_10412:HG2_Ill_manta_3113:HG2_Ill_SpiralSDKrefine_1536:HG2_Ill_Krunchall_15044:HG2_Ill_GATKHCSBGrefine_7445:HG2_Ill_250bpfermikitraw_14743;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0382166;ClusterMaxSizeDiff=0.0382166;ClusterMaxEditDist=0.0769231;PBcalls=4;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-78;DistBack=30498;DistForward=40724;DistMin=30498;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=78;REFWIDENED=10:11556163-11556318;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:28:./.:10:26:26:1:1|0:0:14:30:0:0/1:30:23:./.:.:.:.:.:.
chr10	12288834	HG3_Ill_SVrefine2DISCOVARDovetail_8106	CCCCCCTCCATACACTTGTGTCCCCCTCTGTCATCTCCCCACTCTGGACACTGTGTCCTCCTCTGTCACCTCCCCCCTCAGTACACTGTGTCTTCCTCTCTCACCTCCCCCTCAGGACACTGTGTCCTCCTCTCTCTCACCTCCCCCTCAGGACACTGTCCTCCTCTCTCACCTCCCACTCTGGACACTGTGTCCTCCTCTCTCACCGCCCACTCCGGACACTGTGTCCTCCTCTCTCTCACCTCCCCCTCAGGACACTGTCCTCCTCTCTCACCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7783:HG4_Ill_GATKHCSBGrefine_7627:HG3_PB_pbsv_10787:HG3_Ill_GATKHCSBGrefine_7350:HG2_Ill_GATKHCSBGrefine_7446:HG4_PB_pbsv_11089:HG2_PB_pbsv_11061:HG3_PB_SVrefine2Falcon1Dovetail_6698:HG4_PB_SVrefine2PBcRDovetail_5573:HG3_Ill_SVrefine2DISCOVARDovetail_8106:HG2_PB_SVrefine2PB10Xhap12_8077:HG2_PB_SVrefine2Falcon1plusDovetail_1136:HG2_Ill_SVrefine2DISCOVARplusDovetail_1246;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7783:HG4_PB_SVrefine2PBcRDovetail_5573:HG3_Ill_SVrefine2DISCOVARDovetail_8106:HG2_PB_SVrefine2PB10Xhap12_8077:HG2_PB_SVrefine2Falcon1plusDovetail_1136:HG2_Ill_SVrefine2DISCOVARplusDovetail_1246;NumExactMatchSVs=6;ClusterMaxShiftDist=0.137457;ClusterMaxSizeDiff=0.137457;ClusterMaxEditDist=0.164948;PBcalls=7;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-275;DistBack=-208;DistForward=-78;DistMin=-208;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=432;REFWIDENED=10:12288835-12289541;PctSeqSimilarity=0.8986;PctSizeSimilarity=0.9076;PctRecOverlap=0.0329;SizeDiff=-28;StartDistance=-266;EndDistance=-294;GTMatch=0;TruScore=61;MatchId=364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:26:0|1:26:4:2:20:0/0:51:0:32:1:0/0:19:0:./.:.:.:.:.:.
chr10	12560459	HG3_Ill_GATKHCSBGrefine_7352	TCTTTATTCATTCTTTTTTTATTTTTTATTTTTTATTTTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCACAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGTTAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATATCTACTTCTTTCTACACAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAAGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCACCCTCCCGGACAGGGCGGCTGGCCAGACAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGACTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGACCCCCCCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCTCCCCACCTCCCTCCCGGATGGGGTGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGCGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGATCCCCCCACCTCCCTTCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCTCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGATCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCAACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGACGGAGGGGCTCCCCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGGTGGCCGGGCAGAGACGCTCCTCACCTCCCAGACAGGGTTGCGGCCCAGCAGAGGCGCTCCTCACATCCTAGACAGGGCGGCGGGGCAGAGGCGCTCCCCACTCAGACGATGGGCGGGTCAGGCAGAGATGCTCCTCACTTCCTAGTTGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTCTTAGATGGGATGGCGGCTGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACCTCCCAGACGATGGGCGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTAGGTTGTAGTGAGCTGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCAAAACCCAGTCTCCACCAAAAAAAAACGAAAACCAGTCAGGCGTGGCAGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATCAGAGGGAGACCGTGGAAGGAGACCGTGGGGAGAGGGAGAGGGAGGGGGAGGGGGAGGGGGAGGGGGAGAG	T	20	PASS	ClusterIDs=HG2_PB_HySA_19995:HG2_10X_allpass_1814:HG3_10X_allpass_2192:HG3_Ill_Krunchall_14763:HG2_Ill_Krunchall_15054:HG2_Ill_tnscope_1242:HG4_PB_assemblyticsfalcon_2403:HG4_PB_SVrefine2Falcon1Dovetail_6763:HG3_PB_pbsv_10792:HG3_PB_assemblyticsfalcon_2458:HG3_PB_SVrefine2PBcRDovetail_5180:HG3_PB_SVrefine2Falcon1Dovetail_6703:HG3_Ill_MetaSV_461:HG3_Ill_GATKHCSBGrefine_7352:HG2_PB_pbsv_11067:HG2_PB_assemblyticsfalcon_2472:HG2_PB_SVrefine2PBcRplusDovetail_1093:HG2_PB_SVrefine2PB10Xhap12_8081:HG2_PB_SVrefine2Falcon2Bionano_5309:HG2_PB_SVrefine2Falcon1plusDovetail_1141:HG2_Ill_SpiralSDKrefine_1544:HG2_Ill_MetaSV_480:HG2_Ill_GATKHCSBGrefine_7449:HG2_Ill_breakscan11_1603;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7449:HG2_Ill_MetaSV_480:HG2_Ill_SpiralSDKrefine_1544:HG2_PB_SVrefine2Falcon1plusDovetail_1141:HG2_PB_SVrefine2Falcon2Bionano_5309:HG2_PB_SVrefine2PB10Xhap12_8081:HG2_PB_SVrefine2PBcRplusDovetail_1093:HG2_PB_assemblyticsfalcon_2472:HG2_PB_pbsv_11067:HG3_Ill_GATKHCSBGrefine_7352:HG3_Ill_MetaSV_461:HG3_PB_SVrefine2Falcon1Dovetail_6703:HG3_PB_SVrefine2PBcRDovetail_5180:HG3_PB_assemblyticsfalcon_2458:HG3_PB_pbsv_10792:HG4_PB_SVrefine2Falcon1Dovetail_6763:HG4_PB_assemblyticsfalcon_2403;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00917614;ClusterMaxSizeDiff=0.00917614;ClusterMaxEditDist=0.00917614;PBcalls=13;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=12;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-2514;DistBack=96948;DistForward=-2502;DistMin=-2502;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=10:12560460-12562987;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:53:0|1:20:0:1:30:0|1:40:0:0:33:0/1:39:22:0/1:168:75:2562:.:.
chr10	12564847	HG2_PB_SVrefine2PBcRplusDovetail_1094	CAGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCTGACCCCCCACCTGCCTCCCAGACGGGGCGGCTGGCCTGGTGGGGGCTGATCCCCATCTCCCTCCCAGAT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_10793:HG4_PB_assemblyticsfalcon_2404:HG3_PB_assemblyticsfalcon_2459:HG4_PB_SVrefine2Falcon1Dovetail_6764:HG3_PB_SVrefine2PBcRDovetail_5181:HG2_PB_SVrefine2PBcRplusDovetail_1094:HG2_PB_SVrefine2PB10Xhap12_8082:HG2_PB_SVrefine2Falcon2Bionano_5310:HG3_PB_SVrefine2Falcon1Dovetail_6704:HG3_Ill_MetaSV_462:HG3_Ill_manta_2539:HG3_10X_allpass_2193:HG2_PB_pbsv_11068;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5310:HG2_PB_SVrefine2PB10Xhap12_8082:HG2_PB_SVrefine2PBcRplusDovetail_1094:HG3_PB_SVrefine2PBcRDovetail_5181:HG4_PB_SVrefine2Falcon1Dovetail_6764;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0353357;ClusterMaxSizeDiff=0.0353357;ClusterMaxEditDist=0.09319;PBcalls=10;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=-140;DistBack=-2;DistForward=-114;DistMin=-114;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=62;REFWIDENED=10:12564786-12564987;PctSeqSimilarity=0.9554;PctSizeSimilarity=0.9929;PctRecOverlap=0.7943;SizeDiff=1;StartDistance=28;EndDistance=29;GTMatch=0;TruScore=91;MatchId=366.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:29:0|1:18:1:0:24:./.:22:1:1:2:0/1:30:6:./.:.:.:.:.:.
chr10	12596202	HG2_Ill_SpiralSDKrefine_1546	GCTGGAGTACAATGGCGCAATCTCAGCTCACTGCAACTTCCACCTCCTGGCTTCAAGCGATTCTCCCGCCTCAGCCTCCCGAAGCTGGGATTACAGGCATCTGCCATCATGCCCAGCTAATTTTTGTATTTTTGTAGAGATGAGGTTTCTCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGAGTTTACAGGCATGAGCCACTGCGCCTGGCCAAGATTTTCATTTATTTCTATTACACATGGGGAGCAAAAATATAAGAAAGTCCTCTCTTGTATAATGGCACACATAGAACCATTCATTTTTTCTTTTTTTCTCCAGGCAGGATCTTGCTCTGTTGCCCAGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7786:HG4_PB_assemblyticsfalcon_2406:HG2_10X_allpass_1815:HG3_PB_assemblyticsfalcon_2461:HG3_10X_allpass_2194:HG2_PB_HySA_19997:HG2_PB_pbsv_11070:HG3_Ill_MetaSV_463:HG2_Ill_MetaSV_481:HG4_PB_SVrefine2Falcon1Dovetail_6765:HG3_Ill_manta_2540:HG3_Ill_GATKHCSBGrefine_7354:HG2_Ill_manta_3114:HG2_Ill_SpiralSDKrefine_1546:HG2_Ill_GATKHCSBGrefine_7451:HG3_PB_pbsv_10795:HG2_Ill_tnscope_1243:HG3_PB_SVrefine2Falcon1Dovetail_6705:HG2_PB_SVrefine2PB10Xhap12_8083:HG2_PB_SVrefine2Falcon2Bionano_5312:HG2_PB_SVrefine2Falcon1plusDovetail_1143;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7451:HG2_Ill_SpiralSDKrefine_1546:HG2_Ill_manta_3114:HG3_Ill_GATKHCSBGrefine_7354:HG3_Ill_manta_2540:HG4_PB_SVrefine2Falcon1Dovetail_6765;NumExactMatchSVs=6;ClusterMaxShiftDist=0.211829;ClusterMaxSizeDiff=0.211829;ClusterMaxEditDist=0.211829;PBcalls=10;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-382;DistBack=-331;DistForward=-377;DistMin=-377;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=39;REFWIDENED=10:12596179-12596599;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:23:0|1:24:5:1:21:0|1:61:0:0:16:0/1:61:19:0/1:25:6:.:.:.
chr10	14750858	HG2_PB_SVrefine2Falcon2Bionano_5320	GATGGAAAATTAGCATATGAAAAGATGCTCAATATAGATGTCATTAGGGAATTGCAGATTAAAACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7797:HG2_PB_HySA_20031:HG4_Ill_GATKHC_17782:HG4_Ill_GATKHCSBGrefine_7641:HG2_Ill_GATKHC_17742:HG2_Ill_GATKHCSBGrefine_7463:HG4_Ill_manta_2655:HG2_PB_assemblyticsPBcR_2451:HG4_PB_pbsv_11112:HG2_PB_assemblyticsfalcon_2498:HG3_PB_pbsv_10815:HG2_PB_pbsv_11091:HG4_PB_HySA_16179:HG4_PB_SVrefine2PBcRDovetail_5585:HG4_Ill_svaba_13872:HG4_Ill_scalpel_10163:HG4_Ill_SVrefine2DISCOVARDovetail_7920:HG4_Ill_Krunchall_15357:HG4_Ill_GATKHC_17781:HG4_Ill_GATKHCSBGrefine_7640:HG4_Ill_250bpfermikitraw_14663:HG4_Ill_150bpfermikitraw_14046:HG3_PB_SVrefine2PBcRDovetail_5192:HG3_PB_SVrefine2Falcon1Dovetail_6716:HG3_PB_HySA_16705:HG3_Ill_svaba_13928:HG3_Ill_scalpel_10583:HG3_Ill_manta_2544:HG3_Ill_SVrefine2DISCOVARDovetail_8120:HG3_Ill_Krunchall_14791:HG3_Ill_GATKHCSBGrefine_7367:HG3_Ill_250bpfermikitraw_14370:HG3_Ill_150bpfermikitraw_13906:HG2_PB_SVrefine2Falcon2Bionano_5320:HG2_Ill_svaba_13781:HG2_Ill_scalpel_10441:HG2_Ill_manta_3120:HG2_Ill_Krunchall_15081:HG2_Ill_GATKHC_17741:HG2_Ill_GATKHCSBGrefine_7462:HG2_Ill_250bpfermikitraw_14776:HG2_Ill_150bpfermikitraw_13878;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7797:HG4_PB_SVrefine2PBcRDovetail_5585:HG4_Ill_svaba_13872:HG4_Ill_scalpel_10163:HG4_Ill_SVrefine2DISCOVARDovetail_7920:HG4_Ill_Krunchall_15357:HG4_Ill_GATKHC_17781:HG4_Ill_GATKHCSBGrefine_7640:HG4_Ill_250bpfermikitraw_14663:HG4_Ill_150bpfermikitraw_14046:HG3_PB_SVrefine2PBcRDovetail_5192:HG3_PB_SVrefine2Falcon1Dovetail_6716:HG3_PB_HySA_16705:HG3_Ill_svaba_13928:HG3_Ill_scalpel_10583:HG3_Ill_manta_2544:HG3_Ill_SVrefine2DISCOVARDovetail_8120:HG3_Ill_Krunchall_14791:HG3_Ill_GATKHCSBGrefine_7367:HG3_Ill_250bpfermikitraw_14370:HG3_Ill_150bpfermikitraw_13906:HG2_PB_SVrefine2Falcon2Bionano_5320:HG2_Ill_svaba_13781:HG2_Ill_scalpel_10441:HG2_Ill_manta_3120:HG2_Ill_Krunchall_15081:HG2_Ill_GATKHC_17741:HG2_Ill_GATKHCSBGrefine_7462:HG2_Ill_250bpfermikitraw_14776:HG2_Ill_150bpfermikitraw_13878;NumExactMatchSVs=30;ClusterMaxShiftDist=0.126984;ClusterMaxSizeDiff=0.126984;ClusterMaxEditDist=0.146341;PBcalls=12;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-65;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=68;REFWIDENED=10:14750859-14750991;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=368.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:1:27:1:22:1/1:0:20:0:14:1/1:0:44:./.:.:.:.:.:.
chr10	14936348	HG2_Ill_scalpel_10442	AGCAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_770:HG2_10X_allpass_1817:HG2_PB_assemblyticsfalcon_2499:HG2_PB_assemblyticsPBcR_2452:HG4_Ill_Krunchall_15358:HG4_Ill_Spiral_904:HG2_Ill_breakscan11_1605:HG4_Ill_MetaSV_509:HG2_Ill_tnscope_1248:HG4_Ill_scalpel_10164:HG4_Ill_manta_2656:HG4_Ill_GATKHCSBGrefine_7642:HG4_10X_allpass_2122:HG2_PB_pbsv_11092:HG2_PB_SVrefine2PBcRplusDovetail_1105:HG2_PB_SVrefine2PB10Xhap12_8093:HG2_PB_SVrefine2Falcon1plusDovetail_1153:HG2_PB_HySA_20032:HG2_Ill_scalpel_10442:HG2_Ill_manta_3121:HG2_Ill_SVrefine2DISCOVARplusDovetail_1263:HG2_Ill_MetaSV_493:HG2_Ill_GATKHCSBGrefine_7464:HG2_10X_SVrefine210Xhap12_7798:HG4_PB_pbsv_11113;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7798:HG2_Ill_GATKHCSBGrefine_7464:HG2_Ill_MetaSV_493:HG2_Ill_SVrefine2DISCOVARplusDovetail_1263:HG2_Ill_manta_3121:HG2_Ill_scalpel_10442:HG2_PB_HySA_20032:HG2_PB_SVrefine2Falcon1plusDovetail_1153:HG2_PB_SVrefine2PB10Xhap12_8093:HG2_PB_SVrefine2PBcRplusDovetail_1105:HG2_PB_pbsv_11092:HG4_10X_allpass_2122:HG4_Ill_GATKHCSBGrefine_7642:HG4_Ill_manta_2656:HG4_Ill_scalpel_10164;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0670926;ClusterMaxSizeDiff=0.0670926;ClusterMaxEditDist=0.0670926;PBcalls=8;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=68253;DistForward=13180;DistMin=13180;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=10:14936349-14936676;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:50:0|1:26:3:3:42:1|0:0:23:41:0:0/1:24:24:0/1:24:12:.:.:0.913126
chr10	14954806	HG3_PB_SVrefine2PBcRDovetail_5193	TAATAGCTGGGACTACAGGTGCCCGCCACCACACCTGGCTAATTTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCTCTGACCACATGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7799:HG3_PB_pbsv_10816:HG2_PB_pbsv_11093:HG2_PB_HySA_20033:HG3_PB_HySA_16706:HG3_PB_SVrefine2PBcRDovetail_5193:HG3_Ill_GATKHCSBGrefine_7368:HG2_PB_SVrefine2PBcRplusDovetail_1106:HG2_PB_SVrefine2PB10Xhap12_8094:HG2_PB_SVrefine2Falcon2Bionano_5321:HG2_PB_SVrefine2Falcon1plusDovetail_1154:HG2_Ill_SVrefine2DISCOVARplusDovetail_1265:HG2_Ill_GATKHCSBGrefine_7465:HG2_10X_allpass_1818;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7799:HG3_PB_SVrefine2PBcRDovetail_5193:HG3_Ill_GATKHCSBGrefine_7368:HG2_PB_SVrefine2PBcRplusDovetail_1106:HG2_PB_SVrefine2PB10Xhap12_8094:HG2_PB_SVrefine2Falcon2Bionano_5321:HG2_PB_SVrefine2Falcon1plusDovetail_1154:HG2_Ill_SVrefine2DISCOVARplusDovetail_1265:HG2_Ill_GATKHCSBGrefine_7465:HG2_10X_allpass_1818;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0229885;ClusterMaxSizeDiff=0.0229885;ClusterMaxEditDist=0.0289017;PBcalls=9;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-174;DistBack=4641;DistForward=-113;DistMin=-113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=175;REFWIDENED=10:14954807-14955155;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=370.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:32:1|0:6:23:14:3:0|1:25:0:1:16:0/1:24:20:./.:.:.:.:.:.
chr10	15532464	HG3_Ill_MetaSV_472	TCTACATGAGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTTTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCC	T	20	PASS	ClusterIDs=HG3_Ill_Krunchall_14796:HG2_Ill_Krunchall_15092:HG2_PB_assemblyticsfalcon_2511:HG2_PB_assemblyticsPBcR_2462:HG2_PB_pbsv_11100:HG2_Ill_tnscope_1249:HG2_Ill_MetaSV_497:HG4_PB_SVrefine2Falcon1Dovetail_6776:HG3_PB_pbsv_10821:HG3_PB_SVrefine2PBcRDovetail_5198:HG3_Ill_scalpel_10588:HG3_Ill_manta_2545:HG3_Ill_SVrefine2DISCOVARDovetail_8126:HG3_Ill_MetaSV_472:HG3_Ill_GATKHCSBGrefine_7371:HG3_10X_allpass_2197:HG2_PB_SVrefine2PBcRplusDovetail_1111:HG2_PB_SVrefine2PB10Xhap12_8102:HG2_PB_SVrefine2Falcon1plusDovetail_1160:HG2_Ill_scalpel_10449:HG2_Ill_breakscan11_1607:HG2_Ill_SpiralSDKrefine_1568:HG2_Ill_SVrefine2DISCOVARplusDovetail_1271:HG2_Ill_GATKHCSBGrefine_7468:HG2_10X_SVrefine210Xhap12_7802:HG4_PB_assemblyticsfalcon_2443:HG3_PB_HySA_16713;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7802:HG2_Ill_GATKHCSBGrefine_7468:HG2_Ill_SVrefine2DISCOVARplusDovetail_1271:HG2_Ill_SpiralSDKrefine_1568:HG2_Ill_breakscan11_1607:HG2_Ill_scalpel_10449:HG2_PB_SVrefine2Falcon1plusDovetail_1160:HG2_PB_SVrefine2PB10Xhap12_8102:HG2_PB_SVrefine2PBcRplusDovetail_1111:HG3_10X_allpass_2197:HG3_Ill_GATKHCSBGrefine_7371:HG3_Ill_MetaSV_472:HG3_Ill_SVrefine2DISCOVARDovetail_8126:HG3_Ill_manta_2545:HG3_Ill_scalpel_10588:HG3_PB_SVrefine2PBcRDovetail_5198:HG3_PB_pbsv_10821:HG4_PB_SVrefine2Falcon1Dovetail_6776;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0823723;ClusterMaxSizeDiff=0.0819672;ClusterMaxEditDist=0.270181;PBcalls=11;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-311;DistForward=-1;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=334;REFWIDENED=10:15532144-15532787;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=371.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:25:0|1:33:0:1:24:0|1:40:0:0:21:0/1:29:13:0/1:17:4:.:.:.
chr10	18330520	HG2_Ill_150bpfermikitraw_13906	ATATATATGTGTATATATATGTATATACATATGTATATATGTGTATATATATGTATATACATATG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_11127:HG2_PB_HySA_20068:HG2_PB_assemblyticsPBcR_2473:HG2_PB_pbsv_11108:HG3_PB_pbsv_10832:HG4_PB_assemblyticsfalcon_2459:HG4_Ill_svaba_13893:HG4_Ill_250bpfermikitraw_14685:HG3_PB_assemblyticsfalcon_2511:HG3_Ill_svaba_13948:HG3_Ill_GATKHCSBGrefine_7380:HG3_Ill_250bpfermikitraw_14394:HG2_Ill_svaba_13806:HG2_Ill_GATKHCSBGrefine_7474:HG2_Ill_250bpfermikitraw_14801:HG2_Ill_150bpfermikitraw_13906;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13906:HG2_Ill_250bpfermikitraw_14801:HG2_Ill_GATKHCSBGrefine_7474:HG2_Ill_svaba_13806:HG3_Ill_250bpfermikitraw_14394:HG3_Ill_GATKHCSBGrefine_7380:HG3_Ill_svaba_13948:HG3_PB_assemblyticsfalcon_2511:HG4_Ill_250bpfermikitraw_14685:HG4_Ill_svaba_13893:HG4_PB_assemblyticsfalcon_2459;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0472441;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.111111;PBcalls=7;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-64;DistBack=-1;DistForward=-64;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=272;REFWIDENED=10:18330521-18330856;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=372.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:53:1/1:1:22:2:21:1/1:0:6:0:7:1/1:0:27:./.:.:.:.:.:.
chr10	18731841	HG2_Ill_250bpfermikitraw_14805	ATATATATATATATGTATATATATATATATGTGTATATATATATATGTATATATATATGTGTATATATATATATG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_13908:HG3_Ill_manta_2547:HG2_Ill_manta_3123:HG3_Ill_GATKHC_17684:HG3_Ill_GATKHCSBGrefine_7382:HG2_Ill_GATKHC_17776:HG2_Ill_GATKHCSBGrefine_7477:HG4_Ill_GATKHC_17813:HG4_Ill_GATKHCSBGrefine_7654:HG2_Ill_GATKHC_17775:HG2_Ill_GATKHCSBGrefine_7476:HG2_PB_HySA_20072:HG2_PB_pbsv_11109:HG2_PB_assemblyticsfalcon_2525:HG3_PB_assemblyticsfalcon_2514:HG2_Ill_SpiralSDKrefine_1582:HG2_PB_assemblyticsPBcR_2475:HG4_Ill_svaba_13896:HG4_Ill_scalpel_10183:HG4_Ill_Krunchall_15383:HG4_Ill_250bpfermikitraw_14689:HG4_Ill_150bpfermikitraw_14071:HG2_Ill_svaba_13808:HG2_Ill_250bpfermikitraw_14805:HG2_Ill_150bpfermikitraw_13909:HG3_PB_pbsv_10834:HG4_PB_assemblyticsfalcon_2463:HG3_Ill_Krunchall_14817:HG3_Ill_250bpfermikitraw_14397:HG3_Ill_150bpfermikitraw_13928:HG2_Ill_250bpfermikitraw_14804;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_13909:HG2_Ill_250bpfermikitraw_14805:HG2_Ill_svaba_13808:HG4_Ill_150bpfermikitraw_14071:HG4_Ill_250bpfermikitraw_14689:HG4_Ill_Krunchall_15383:HG4_Ill_scalpel_10183:HG4_Ill_svaba_13896;NumExactMatchSVs=8;ClusterMaxShiftDist=0.2;ClusterMaxSizeDiff=0.2;ClusterMaxEditDist=0.2;PBcalls=7;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-74;DistBack=35802;DistForward=-57;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=54;REFWIDENED=10:18731842-18731969;PctSeqSimilarity=0.9621;PctSizeSimilarity=0.9459;PctRecOverlap=0.76;SizeDiff=4;StartDistance=-18;EndDistance=-14;GTMatch=0;TruScore=88;MatchId=373.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:78:1/1:3:26:1:18:./.:3:14:0:9:1/1:0:20:./.:.:.:.:.:.
chr10	19397308	HG2_10X_SVrefine210Xhap12_7811	TGTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_11135:HG4_Ill_GATKHCSBGrefine_7661:HG3_Ill_GATKHCSBGrefine_7389:HG2_Ill_GATKHCSBGrefine_7481:HG2_PB_SVrefine2PB10Xhap12_8113:HG2_Ill_manta_3125:HG2_PB_PB10Xdip_3438:HG3_Ill_MetaSV_478:HG2_Ill_breakscan11_1608:HG4_Ill_Spiral_907:HG3_Ill_Spiral_11561:HG2_Ill_Spiral_771:HG4_PB_assemblyticsfalcon_2470:HG4_Ill_Krunchall_15389:HG3_PB_assemblyticsfalcon_2524:HG2_PB_assemblyticsfalcon_2531:HG2_PB_assemblyticsPBcR_2482:HG4_PB_HySA_16206:HG3_PB_HySA_16739:HG2_PB_pbsv_11116:HG2_Ill_tnscope_1250:HG4_PB_SVrefine2PBcRDovetail_5595:HG4_PB_SVrefine2Falcon1Dovetail_6784:HG4_Ill_scalpel_10190:HG4_10X_allpass_2126:HG3_PB_pbsv_10841:HG3_PB_SVrefine2PBcRDovetail_5204:HG3_PB_SVrefine2Falcon1Dovetail_6730:HG3_Ill_scalpel_10610:HG3_10X_allpass_2201:HG2_PB_SVrefine2PBcRplusDovetail_1118:HG2_PB_SVrefine2PB10Xhap12_8112:HG2_PB_SVrefine2Falcon1plusDovetail_1166:HG2_PB_HySA_20077:HG2_Ill_scalpel_10465:HG2_Ill_MetaSV_503:HG2_10X_allpass_1822:HG2_10X_SVrefine210Xhap12_7811;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7811:HG2_10X_allpass_1822:HG2_Ill_MetaSV_503:HG2_Ill_scalpel_10465:HG2_PB_HySA_20077:HG2_PB_SVrefine2Falcon1plusDovetail_1166:HG2_PB_SVrefine2PB10Xhap12_8112:HG2_PB_SVrefine2PBcRplusDovetail_1118:HG3_10X_allpass_2201:HG3_Ill_scalpel_10610:HG3_PB_SVrefine2Falcon1Dovetail_6730:HG3_PB_SVrefine2PBcRDovetail_5204:HG3_PB_pbsv_10841:HG4_10X_allpass_2126:HG4_Ill_scalpel_10190:HG4_PB_SVrefine2Falcon1Dovetail_6784:HG4_PB_SVrefine2PBcRDovetail_5595;NumExactMatchSVs=17;ClusterMaxShiftDist=0.128326;ClusterMaxSizeDiff=0.128326;ClusterMaxEditDist=0.135008;PBcalls=19;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=-337;DistForward=-329;DistMin=-337;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=10:19397309-19397654;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=374.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:35:0|1:21:1:0:31:1|0:0:29:39:0:0/1:16:21:0/1:23:7:.:.:.
chr10	19504645	HG4_Ill_svaba_13905	AATAAATTAGTATAAATAATTTAGTATAAATAATAATTAGTATAAACAAATAATTTAGTATAATTAGTATAAATAAATAGTATATTTATTTATATAAATAATTAGTATAAATACATAATTTAGTATAAATAATAAAACTC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_11118:HG2_PB_PB10Xdip_3439:HG2_PB_SVrefine2PB10Xhap12_8114:HG4_Ill_manta_2661:HG2_Ill_manta_3126:HG4_Ill_Spiral_908:HG2_Ill_Spiral_772:HG4_PB_assemblyticsfalcon_2476:HG4_Ill_Krunchall_15391:HG2_Ill_Krunchall_15116:HG4_PB_pbsv_11137:HG4_PB_SVrefine2PBcRDovetail_5596:HG4_PB_SVrefine2Falcon1Dovetail_6785:HG4_Ill_svaba_13905:HG4_Ill_scalpel_10194:HG4_Ill_SVrefine2DISCOVARDovetail_7941:HG4_Ill_MetaSV_515:HG4_Ill_GATKHCSBGrefine_7663:HG4_10X_allpass_2127:HG2_Ill_svaba_13814:HG2_Ill_SVrefine2DISCOVARplusDovetail_1279:HG2_Ill_MetaSV_504:HG2_Ill_GATKHCSBGrefine_7483:HG2_10X_SVrefine210Xhap12_7813;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7813:HG2_Ill_GATKHCSBGrefine_7483:HG2_Ill_MetaSV_504:HG2_Ill_SVrefine2DISCOVARplusDovetail_1279:HG2_Ill_svaba_13814:HG4_10X_allpass_2127:HG4_Ill_GATKHCSBGrefine_7663:HG4_Ill_MetaSV_515:HG4_Ill_SVrefine2DISCOVARDovetail_7941:HG4_Ill_scalpel_10194:HG4_Ill_svaba_13905:HG4_PB_SVrefine2Falcon1Dovetail_6785:HG4_PB_SVrefine2PBcRDovetail_5596;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0501792;ClusterMaxSizeDiff=0.0496454;ClusterMaxEditDist=0.0860215;PBcalls=7;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-139;DistBack=21635;DistForward=-134;DistMin=-134;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=10:19504646-19504796;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:17:0|1:30:5:3:11:1|0:0:25:53:0:0/1:40:22:./.:.:.:.:.:.
chr10	20058500	HG2_PB_SVrefine2PB10Xhap12_8118	TCTTGCTTGCTTGCTTTTTCTTTTCTTTCTTTTCTTTCTCTTTCTTGCTTGCTTGCTTGCTTTCTTGCTTGCTTGCTTTCTTGCTTTCTTT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1170:HG4_Ill_Krunchall_15398:HG3_PB_SVrefine2PBcRDovetail_5208:HG3_PB_pbsv_10848:HG3_Ill_manta_2549:HG3_Ill_SVrefine2DISCOVARDovetail_8153:HG2_PB_assemblyticsPBcR_2490:HG2_PB_SVrefine2PBcRplusDovetail_1122:HG2_PB_SVrefine2PB10Xhap12_8118:HG2_PB_SVrefine2Falcon2Bionano_5333:HG2_Ill_SVrefine2DISCOVARplusDovetail_1284:HG2_10X_SVrefine210Xhap12_7816:HG4_PB_pbsv_11143:HG2_PB_pbsv_11123:HG4_Ill_GATKHC_17827:HG3_Ill_GATKHC_17706:HG3_Ill_GATKHCSBGrefine_7393:HG2_Ill_GATKHC_17791:HG4_Ill_svaba_13911:HG4_Ill_250bpfermikitraw_14702:HG4_Ill_150bpfermikitraw_14080:HG3_Ill_svaba_13974:HG3_Ill_250bpfermikitraw_14418:HG3_Ill_150bpfermikitraw_13946:HG2_Ill_svaba_13821:HG2_Ill_250bpfermikitraw_14815:HG2_Ill_150bpfermikitraw_13918:HG3_Ill_Krunchall_14837;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7816:HG2_Ill_SVrefine2DISCOVARplusDovetail_1284:HG2_PB_SVrefine2Falcon2Bionano_5333:HG2_PB_SVrefine2PB10Xhap12_8118:HG2_PB_SVrefine2PBcRplusDovetail_1122:HG2_PB_assemblyticsPBcR_2490:HG3_Ill_SVrefine2DISCOVARDovetail_8153:HG3_Ill_manta_2549:HG3_PB_SVrefine2PBcRDovetail_5208;NumExactMatchSVs=9;ClusterMaxShiftDist=0.2;ClusterMaxSizeDiff=0.192771;ClusterMaxEditDist=0.3375;PBcalls=9;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-90;DistBack=-39;DistForward=7;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=10:20058499-20058591;PctSeqSimilarity=0.9935;PctSizeSimilarity=1;PctRecOverlap=0.1648;SizeDiff=0;StartDistance=76;EndDistance=76;GTMatch=0;TruScore=71;MatchId=376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:54:1/1:1:16:4:18:1/1:0:6:0:9:1/1:0:30:./.:.:.:.:.:.
chr10	20477956	HG4_Ill_GATKHCSBGrefine_7670	AATGAAGAATCTTCGCTTTTCTATTAAGCTGCTTGTCCTGAAATATAGCATAAACAAGATTGTCTTTTAAGAATGCAAAGTAAAAGTTTATTTTTACCTCCTTTTAAGCCTTCCAAACCTGAGTTTAACAAAAGTGTACTAATTATTTTTGTGTGGATTAAATATAAT	A	20	PASS	ClusterIDs=HG4_Ill_Krunchall_15405:HG4_Ill_svaba_13915:HG4_Ill_GATKHCSBGrefine_7670:HG4_10X_allpass_2128:HG2_PB_SVrefine2PB10Xhap12_8122:HG2_Ill_svaba_13823:HG2_Ill_manta_3129:HG2_Ill_SVrefine2DISCOVARplusDovetail_1288:HG2_Ill_GATKHCSBGrefine_7489:HG2_10X_allpass_1823:HG2_10X_SVrefine210Xhap12_7818:HG4_Ill_Spiral_909:HG2_Ill_SpiralSDKrefine_1593:HG2_Ill_Spiral_773:HG4_PB_pbsv_11147:HG2_PB_pbsv_11129;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7818:HG2_10X_allpass_1823:HG2_Ill_GATKHCSBGrefine_7489:HG2_Ill_SVrefine2DISCOVARplusDovetail_1288:HG2_Ill_manta_3129:HG2_Ill_svaba_13823:HG2_PB_SVrefine2PB10Xhap12_8122:HG4_10X_allpass_2128:HG4_Ill_GATKHCSBGrefine_7670:HG4_Ill_svaba_13915;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0179104;ClusterMaxSizeDiff=0.0179104;ClusterMaxEditDist=0.0239521;PBcalls=3;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-167;DistBack=-163;DistForward=-167;DistMin=-167;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=10:20477957-20478124;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=377.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:1|0:7:23:16:4:1|0:0:28:30:0:0/1:39:24:./.:.:.:.:.:.
chr10	20667245	HG2_10X_allpass_1824	TAAAAGATTAGTAAGGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_774:HG4_PB_assemblyticsfalcon_2492:HG3_PB_assemblyticsfalcon_2540:HG2_PB_assemblyticsfalcon_2544:HG2_PB_assemblyticsPBcR_2495:HG3_Ill_Krunchall_14843:HG2_PB_pbsv_11130:HG2_Ill_Krunchall_15130:HG4_PB_pbsv_11148:HG4_Ill_MetaSV_517:HG3_PB_HySA_16753:HG3_Ill_MetaSV_479:HG2_PB_HySA_20096:HG2_Ill_tnscope_1251:HG2_Ill_MetaSV_505:HG4_PB_SVrefine2PBcRDovetail_5603:HG4_PB_SVrefine2Falcon1Dovetail_6794:HG4_Ill_scalpel_10205:HG4_Ill_GATKHCSBGrefine_7671:HG4_10X_allpass_2129:HG3_PB_pbsv_10854:HG3_PB_SVrefine2PBcRDovetail_5211:HG3_PB_SVrefine2Falcon1Dovetail_6737:HG3_Ill_scalpel_10624:HG3_Ill_manta_2550:HG3_Ill_SVrefine2DISCOVARDovetail_8160:HG3_Ill_GATKHCSBGrefine_7397:HG3_10X_allpass_2203:HG2_PB_SVrefine2PBcRplusDovetail_1124:HG2_PB_SVrefine2PB10Xhap12_8123:HG2_PB_SVrefine2Falcon2Bionano_5336:HG2_PB_SVrefine2Falcon1plusDovetail_1175:HG2_Ill_scalpel_10475:HG2_Ill_manta_3130:HG2_Ill_SVrefine2DISCOVARplusDovetail_1290:HG2_Ill_GATKHCSBGrefine_7490:HG2_10X_allpass_1824:HG2_10X_SVrefine210Xhap12_7820:HG2_Ill_breakscan11_1610:HG3_Ill_Spiral_11572;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7820:HG2_10X_allpass_1824:HG2_Ill_GATKHCSBGrefine_7490:HG2_Ill_SVrefine2DISCOVARplusDovetail_1290:HG2_Ill_manta_3130:HG2_Ill_scalpel_10475:HG2_PB_SVrefine2Falcon1plusDovetail_1175:HG2_PB_SVrefine2Falcon2Bionano_5336:HG2_PB_SVrefine2PB10Xhap12_8123:HG2_PB_SVrefine2PBcRplusDovetail_1124:HG3_10X_allpass_2203:HG3_Ill_GATKHCSBGrefine_7397:HG3_Ill_SVrefine2DISCOVARDovetail_8160:HG3_Ill_manta_2550:HG3_Ill_scalpel_10624:HG3_PB_SVrefine2Falcon1Dovetail_6737:HG3_PB_SVrefine2PBcRDovetail_5211:HG3_PB_pbsv_10854:HG4_10X_allpass_2129:HG4_Ill_GATKHCSBGrefine_7671:HG4_Ill_scalpel_10205:HG4_PB_SVrefine2Falcon1Dovetail_6794:HG4_PB_SVrefine2PBcRDovetail_5603;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0859873;ClusterMaxSizeDiff=0.0859873;ClusterMaxEditDist=0.0859873;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=104766;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=10:20667246-20667579;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=378.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:0:25:1:41:1/1:0:17:0:16:1/1:0:50:0/1:4:14:.:.:.
chr10	22952971	HG2_Ill_scalpel_10486	TATATACATATGTATATATACATATATATATATACGTATATATATATACATATATATATATACATATATATATACATATATATATATACATATATATATACATATATATACACATATATATATATACATATATATATATAC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_11139:HG3_Ill_GATKHC_17734:HG3_Ill_GATKHCSBGrefine_7406:HG2_Ill_GATKHCSBGrefine_7500:HG3_Ill_SVrefine2DISCOVARDovetail_8172:HG2_PB_SVrefine2Falcon2Bionano_5340:HG2_Ill_SVrefine2DISCOVARplusDovetail_1298:HG3_PB_assemblyticsfalcon_2548:HG3_PB_SVrefine2Falcon1Dovetail_6742:HG3_PB_SVrefine2PBcRDovetail_5214:HG3_PB_HySA_16766:HG3_PB_pbsv_10863:HG3_Ill_svaba_13994:HG3_Ill_scalpel_10638:HG2_Ill_svaba_13835:HG2_Ill_scalpel_10486;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_scalpel_10486:HG2_Ill_svaba_13835:HG3_Ill_scalpel_10638:HG3_Ill_svaba_13994;NumExactMatchSVs=4;ClusterMaxShiftDist=0.341772;ClusterMaxSizeDiff=0.341772;ClusterMaxEditDist=0.341772;PBcalls=7;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-140;DistBack=17100;DistForward=-135;DistMin=-135;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=67;REFWIDENED=10:22952952-22953158;PctSeqSimilarity=0.8772;PctSizeSimilarity=0.9091;PctRecOverlap=0.9097;SizeDiff=-14;StartDistance=4;EndDistance=-10;GTMatch=0;TruScore=89;MatchId=379.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:20:0|1:38:2:4:19:./.:18:0:4:5:0/1:42:8:./.:.:.:.:.:.
chr10	23400714	HG2_PB_SVrefine2PB10Xhap12_8127	CAATTTAATTTTAATTAATTTAAACTTAAATTTAATTTTAATTAATTTAAACTTA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7826:HG3_PB_HySA_16767:HG4_PB_HySA_16232:HG4_PB_pbsv_11155:HG2_PB_pbsv_11140:HG3_PB_pbsv_10864:HG2_PB_HySA_20117:HG4_PB_SVrefine2PBcRDovetail_5605:HG4_PB_SVrefine2Falcon1Dovetail_6798:HG4_Ill_svaba_13935:HG4_Ill_SVrefine2DISCOVARDovetail_7960:HG4_Ill_GATKHCSBGrefine_7679:HG4_Ill_250bpfermikitraw_14725:HG4_Ill_150bpfermikitraw_14102:HG3_PB_SVrefine2PBcRDovetail_5215:HG3_PB_SVrefine2Falcon1Dovetail_6743:HG3_Ill_svaba_13999:HG3_Ill_SVrefine2DISCOVARDovetail_8173:HG3_Ill_GATKHCSBGrefine_7407:HG3_Ill_250bpfermikitraw_14442:HG3_Ill_150bpfermikitraw_13968:HG2_PB_assemblyticsfalcon_2560:HG2_PB_SVrefine2PBcRplusDovetail_1127:HG2_PB_SVrefine2PB10Xhap12_8127:HG2_PB_SVrefine2Falcon2Bionano_5341:HG2_Ill_svaba_13839:HG2_Ill_manta_3135:HG2_Ill_SpiralSDKrefine_1603:HG2_Ill_SVrefine2DISCOVARplusDovetail_1299:HG2_Ill_GATKHCSBGrefine_7501:HG2_Ill_250bpfermikitraw_14837:HG2_Ill_150bpfermikitraw_13936;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7826:HG4_PB_SVrefine2PBcRDovetail_5605:HG4_PB_SVrefine2Falcon1Dovetail_6798:HG4_Ill_svaba_13935:HG4_Ill_SVrefine2DISCOVARDovetail_7960:HG4_Ill_GATKHCSBGrefine_7679:HG4_Ill_250bpfermikitraw_14725:HG4_Ill_150bpfermikitraw_14102:HG3_PB_SVrefine2PBcRDovetail_5215:HG3_PB_SVrefine2Falcon1Dovetail_6743:HG3_Ill_svaba_13999:HG3_Ill_SVrefine2DISCOVARDovetail_8173:HG3_Ill_GATKHCSBGrefine_7407:HG3_Ill_250bpfermikitraw_14442:HG3_Ill_150bpfermikitraw_13968:HG2_PB_assemblyticsfalcon_2560:HG2_PB_SVrefine2PBcRplusDovetail_1127:HG2_PB_SVrefine2PB10Xhap12_8127:HG2_PB_SVrefine2Falcon2Bionano_5341:HG2_Ill_svaba_13839:HG2_Ill_manta_3135:HG2_Ill_SpiralSDKrefine_1603:HG2_Ill_SVrefine2DISCOVARplusDovetail_1299:HG2_Ill_GATKHCSBGrefine_7501:HG2_Ill_250bpfermikitraw_14837:HG2_Ill_150bpfermikitraw_13936;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.037037;PBcalls=14;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=15432;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=132;REFWIDENED=10:23400714-23400900;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=380.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:2:32:0:10:./.:0:3:0:8:1/1:0:38:./.:.:.:.:.:.
chr10	23635492	HG4_Ill_SVrefine2DISCOVARDovetail_7962	AGAAAAACACGCAGCACATGCATGAGGCAACTGCAAGAGAAATACCAACTAGGCCTTTGAAGGACTCTATTCCTTCTTCCTAAACCACTACTAGGGAAAACATTGTTTAAAGATGTCAGTGTTTTGGCTG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_15149:HG4_PB_HySA_16238:HG3_PB_HySA_16777:HG2_PB_HySA_20126:HG2_PB_HySA_20125:HG2_PB_assemblyticsPBcR_2509:HG3_Ill_MetaSV_482:HG4_PB_assemblyticsfalcon_2512:HG4_PB_SVrefine2PBcRDovetail_5607:HG4_PB_SVrefine2Falcon1Dovetail_6800:HG4_Ill_svaba_13940:HG4_Ill_scalpel_10221:HG4_Ill_manta_2665:HG4_Ill_SVrefine2DISCOVARDovetail_7962:HG4_Ill_MetaSV_519:HG4_Ill_GATKHC_17862:HG4_Ill_GATKHCSBGrefine_7682:HG4_Ill_250bpfermikitraw_14731:HG4_Ill_150bpfermikitraw_14107:HG4_CG_vcfBeta_7081:HG4_10X_allpass_2132:HG3_PB_assemblyticsfalcon_2555:HG3_PB_SVrefine2PBcRDovetail_5217:HG3_PB_SVrefine2Falcon1Dovetail_6745:HG3_Ill_svaba_14002:HG3_Ill_scalpel_10645:HG3_Ill_manta_2555:HG3_Ill_SVrefine2DISCOVARDovetail_8175:HG3_Ill_GATKHCSBGrefine_7409:HG3_Ill_250bpfermikitraw_14447:HG3_Ill_150bpfermikitraw_13973:HG3_CG_vcfBeta_5989:HG2_PB_pbsv_11142:HG2_PB_assemblyticsfalcon_2565:HG2_PB_SVrefine2PBcRplusDovetail_1129:HG2_PB_SVrefine2PB10Xhap12_8129:HG2_PB_SVrefine2Falcon2Bionano_5343:HG2_PB_SVrefine2Falcon1plusDovetail_1181:HG2_Ill_svaba_13842:HG2_Ill_scalpel_10491:HG2_Ill_manta_3136:HG2_Ill_SpiralSDKrefine_1607:HG2_Ill_SVrefine2DISCOVARplusDovetail_1300:HG2_Ill_MetaSV_508:HG2_Ill_GATKHCSBGrefine_7504:HG2_Ill_250bpfermikitraw_14842:HG2_Ill_150bpfermikitraw_13941:HG2_CG_vcfBeta_6297:HG2_10X_allpass_1825:HG2_10X_SVrefine210Xhap12_7828:HG4_PB_pbsv_11158:HG3_PB_pbsv_10868:HG2_Ill_breakscan11_1614;NumClusterSVs=53;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7828:HG2_10X_allpass_1825:HG2_CG_vcfBeta_6297:HG2_Ill_150bpfermikitraw_13941:HG2_Ill_250bpfermikitraw_14842:HG2_Ill_GATKHCSBGrefine_7504:HG2_Ill_MetaSV_508:HG2_Ill_SVrefine2DISCOVARplusDovetail_1300:HG2_Ill_SpiralSDKrefine_1607:HG2_Ill_manta_3136:HG2_Ill_scalpel_10491:HG2_Ill_svaba_13842:HG2_PB_SVrefine2Falcon1plusDovetail_1181:HG2_PB_SVrefine2Falcon2Bionano_5343:HG2_PB_SVrefine2PB10Xhap12_8129:HG2_PB_SVrefine2PBcRplusDovetail_1129:HG2_PB_assemblyticsfalcon_2565:HG2_PB_pbsv_11142:HG3_CG_vcfBeta_5989:HG3_Ill_150bpfermikitraw_13973:HG3_Ill_250bpfermikitraw_14447:HG3_Ill_GATKHCSBGrefine_7409:HG3_Ill_SVrefine2DISCOVARDovetail_8175:HG3_Ill_manta_2555:HG3_Ill_scalpel_10645:HG3_Ill_svaba_14002:HG3_PB_SVrefine2Falcon1Dovetail_6745:HG3_PB_SVrefine2PBcRDovetail_5217:HG3_PB_assemblyticsfalcon_2555:HG4_10X_allpass_2132:HG4_CG_vcfBeta_7081:HG4_Ill_150bpfermikitraw_14107:HG4_Ill_250bpfermikitraw_14731:HG4_Ill_GATKHCSBGrefine_7682:HG4_Ill_GATKHC_17862:HG4_Ill_MetaSV_519:HG4_Ill_SVrefine2DISCOVARDovetail_7962:HG4_Ill_manta_2665:HG4_Ill_scalpel_10221:HG4_Ill_svaba_13940:HG4_PB_SVrefine2Falcon1Dovetail_6800:HG4_PB_SVrefine2PBcRDovetail_5607:HG4_PB_assemblyticsfalcon_2512;NumExactMatchSVs=43;ClusterMaxShiftDist=0.0153846;ClusterMaxSizeDiff=0.0153846;ClusterMaxEditDist=0.015444;PBcalls=19;Illcalls=28;TenXcalls=3;CGcalls=3;PBexactcalls=12;Illexactcalls=25;TenXexactcalls=3;CGexactcalls=3;HG2count=23;HG3count=14;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-129;DistBack=14856;DistForward=11682;DistMin=11682;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:23625731-23637578;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:55:1/1:0:14:1:31:1/1:0:12:0:23:1/1:0:47:./.:.:.:.:.:.
chr10	24078820	HG2_PB_SVrefine2Falcon1plusDovetail_1184	TATATGATATATACATATACATATGCATATACATGTATATATACACATATACATATACATGTATATATACACATATACATATACATATATACACATATACATATACACATATGCACATACACATATACACATATGCATATACACATATACATATGCATATACACATATACACATATGCATATACACATATACACATATGCATATACACATATACACATATGCATATACACATATACACATATGCATATACACATATACACATATGCATATACACATATACACATATGCATATACACATATACACATATGCATATACACATATACACATATGCATATGCACATATGCATATGCAC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1184:HG2_PB_pbsv_11146:HG4_PB_pbsv_11162:HG4_Ill_Krunchall_15428:HG3_PB_SVrefine2Falcon1Dovetail_6749:HG4_PB_SVrefine2PBcRDovetail_5611:HG4_Ill_SVrefine2DISCOVARDovetail_7965:HG2_PB_SVrefine2Falcon2Bionano_5346;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1184:HG4_PB_SVrefine2PBcRDovetail_5611:HG4_Ill_SVrefine2DISCOVARDovetail_7965:HG2_PB_SVrefine2Falcon2Bionano_5346;NumExactMatchSVs=4;ClusterMaxShiftDist=0.124098;ClusterMaxSizeDiff=0.124098;ClusterMaxEditDist=0.124098;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-353;DistBack=24734;DistForward=-325;DistMin=-325;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=10:24078821-24079204;PctSeqSimilarity=0.9418;PctSizeSimilarity=0.9972;PctRecOverlap=0.8729;SizeDiff=1;StartDistance=-45;EndDistance=-44;GTMatch=0;TruScore=93;MatchId=382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:43:0|1:47:1:0:28:./.:2:5:77:0:0/1:49:8:0/1:70:10:.:.:.
chr10	24376838	HG2_Ill_SVrefine2DISCOVARplusDovetail_1304	TGTGGTGGCCTCCCAAGCCTTCCCATGATGAAAAGTAAATAGAGCAGGGCATCTACCAGATTCCCAAACCAAGTTAGTGGACCATCCATTGCAGATGGTAGCCCAAATGAAGTAGTCCTTTCTCTGGGCTTACTGGGCCATTCCCATTCCACATCTCACAGTGGTCCTACAACTATATTGCATACAGTAAACTCTAAGGGTTATGTAGATAATGAGTTCTTTTTTCATGCAGAAGAAGCTAATGACTTTGAGAAGTCAGAGATGCCTGGAGGCACATGGATCTCCTCTGCCCAGGCTCAAGGAACATCCCAAACTTGTGTCCTCCCAGGCTCTGTTTTTTTAATATACATATATATATATATATATACACACATATATGTGTATATATATATATATATTTATTATACTTTAAGTTCTAGGGTACATGTGCACAACGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTACATTAGGTATATCTCCTAATGCTATCCCTCCCCCCTCCCCCTACTCAACAACAGGCCCCAGTGTGTGATGTTCCCCTTCCTGTGTCCAAGTGTTCTCATTGTTCAATTCCCACCTATGACTGAGAACATGCGGTGTTTGGTTTTTTGTCCTTGCGATAGTTTGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCCTACAAAGGACATGAACTTATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTCCGCATTAAACATACGTATGCATGTGTCTTTATAGCAGCATGATTTATAAGCCTTTGGGTATATATCCAGTAATGGGATGGCTGGGTGAAATGGTATTTCCAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCTAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCTGTTCTAACTAGTGTGAGATGATATCTCACTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGGTGATGAGCATTTTTTCATGTGTCTGTTGCCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTCGCCCAGTTGCTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGTGTTCTTTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGACTGCAAAAATTTTCTCCCATTCTGTAAGTTGCCTATTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGTCATGAAGTCTTTGCCCATGCCTATGTCCCGAATGGTATTTCCTAGGTTTTCTTCTAAGGTTTTTATGGTTTTAGGTCTAACATTTAAGTCTTTAATCCATCTTGAATTAATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_11163:HG3_Ill_GATKHCSBGrefine_7411:HG2_Ill_GATKHCSBGrefine_7509:HG2_Ill_tnscope_1252:HG4_PB_SVrefine2PBcRDovetail_5612:HG4_Ill_SVrefine2DISCOVARDovetail_7967:HG3_PB_SVrefine2PBcRDovetail_5219:HG2_PB_SVrefine2PBcRplusDovetail_1133:HG2_PB_SVrefine2PB10Xhap12_8133:HG2_PB_SVrefine2Falcon2Bionano_5347:HG2_PB_SVrefine2Falcon1plusDovetail_1185:HG2_PB_PB10Xdip_3559:HG2_PB_PB10Xdip_3558:HG2_Ill_SVrefine2DISCOVARplusDovetail_1304:HG2_10X_SVrefine210Xhap12_7832:HG4_Ill_MetaSV_520:HG2_PB_HySA_20130:HG3_PB_pbsv_10872:HG3_10X_allpass_2205:HG2_PB_pbsv_11147:HG2_10X_allpass_1826:HG4_10X_allpass_2133:HG2_PB_assemblyticsfalcon_2572:HG2_PB_assemblyticsPBcR_2519:HG3_Ill_Krunchall_14865:HG3_Ill_MetaSV_483:HG2_Ill_MetaSV_509;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7832:HG2_Ill_SVrefine2DISCOVARplusDovetail_1304:HG2_PB_PB10Xdip_3558:HG2_PB_PB10Xdip_3559:HG2_PB_SVrefine2Falcon1plusDovetail_1185:HG2_PB_SVrefine2Falcon2Bionano_5347:HG2_PB_SVrefine2PB10Xhap12_8133:HG2_PB_SVrefine2PBcRplusDovetail_1133:HG3_PB_SVrefine2PBcRDovetail_5219:HG4_Ill_SVrefine2DISCOVARDovetail_7967:HG4_PB_SVrefine2PBcRDovetail_5612;NumExactMatchSVs=11;ClusterMaxShiftDist=0.113475;ClusterMaxSizeDiff=0.113475;ClusterMaxEditDist=0.113475;PBcalls=14;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1603;DistBack=88925;DistForward=-1257;DistMin=-1257;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:24376838-24378441;PctSeqSimilarity=0.9997;PctSizeSimilarity=0.9994;PctRecOverlap=0.9994;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:./.:2:5:1:15:1/1:0:23:0:23:1/1:0:25:1/1:4:92:1595:.:.
chr10	24945816	HG2_PB_assemblyticsPBcR_2525	GGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8136:HG2_PB_assemblyticsfalcon_2576:HG2_PB_assemblyticsPBcR_2525:HG2_PB_SVrefine2Falcon2Bionano_5349:HG2_PB_SVrefine2PBcRplusDovetail_1135:HG2_PB_SVrefine2Falcon1plusDovetail_1187:HG3_PB_pbsv_10875:HG2_PB_pbsv_11149:HG4_PB_pbsv_11165;NumClusterSVs=9;ExactMatchIDs=HG2_PB_assemblyticsPBcR_2525:HG2_PB_assemblyticsfalcon_2576;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0492611;ClusterMaxSizeDiff=0.0492611;ClusterMaxEditDist=0.0882353;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-103;DistBack=301;DistForward=-102;DistMin=-102;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=233;REFWIDENED=10:24945583-24945918;PctSeqSimilarity=0.949;PctSizeSimilarity=0.9223;PctRecOverlap=0.5;SizeDiff=8;StartDistance=44;EndDistance=52;GTMatch=1;TruScore=79;MatchId=384.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:43:1/1:2:13:3:21:./.:2:0:0:0:0/0:48:0:./.:.:.:.:.:.
chr10	25035186	HG2_Ill_GATKHCSBGrefine_7510	TAAAAAAGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5614:HG3_PB_assemblyticsfalcon_2572:HG2_Ill_Spiral_776:HG4_PB_pbsv_11166:HG4_PB_HySA_16254:HG4_Ill_svaba_13953:HG4_Ill_scalpel_10229:HG4_Ill_manta_2669:HG4_Ill_SVrefine2DISCOVARDovetail_7970:HG4_Ill_GATKHC_17875:HG4_Ill_GATKHCSBGrefine_7690:HG4_10X_allpass_2134:HG3_PB_pbsv_10877:HG3_PB_SVrefine2Falcon1Dovetail_6752:HG3_Ill_svaba_14014:HG3_Ill_scalpel_10654:HG3_Ill_manta_2557:HG3_Ill_SVrefine2DISCOVARDovetail_8180:HG3_Ill_GATKHC_17756:HG3_Ill_GATKHCSBGrefine_7412:HG3_Ill_150bpfermikitraw_13987:HG3_10X_allpass_2206:HG2_PB_pbsv_11150:HG2_PB_SVrefine2PB10Xhap12_8137:HG2_PB_SVrefine2Falcon2Bionano_5350:HG2_Ill_svaba_13860:HG2_Ill_scalpel_10500:HG2_Ill_manta_3138:HG2_Ill_SpiralSDKrefine_1620:HG2_Ill_SVrefine2DISCOVARplusDovetail_1308:HG2_Ill_GATKHC_17831:HG2_Ill_GATKHCSBGrefine_7510:HG2_Ill_250bpfermikitraw_14858:HG2_Ill_150bpfermikitraw_13957:HG2_10X_allpass_1827:HG2_10X_SVrefine210Xhap12_7835;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7835:HG2_10X_allpass_1827:HG2_Ill_150bpfermikitraw_13957:HG2_Ill_250bpfermikitraw_14858:HG2_Ill_GATKHCSBGrefine_7510:HG2_Ill_GATKHC_17831:HG2_Ill_SVrefine2DISCOVARplusDovetail_1308:HG2_Ill_SpiralSDKrefine_1620:HG2_Ill_manta_3138:HG2_Ill_scalpel_10500:HG2_Ill_svaba_13860:HG2_PB_SVrefine2Falcon2Bionano_5350:HG2_PB_SVrefine2PB10Xhap12_8137:HG2_PB_pbsv_11150:HG3_10X_allpass_2206:HG3_Ill_150bpfermikitraw_13987:HG3_Ill_GATKHCSBGrefine_7412:HG3_Ill_GATKHC_17756:HG3_Ill_SVrefine2DISCOVARDovetail_8180:HG3_Ill_manta_2557:HG3_Ill_scalpel_10654:HG3_Ill_svaba_14014:HG3_PB_SVrefine2Falcon1Dovetail_6752:HG3_PB_pbsv_10877:HG4_10X_allpass_2134:HG4_Ill_GATKHCSBGrefine_7690:HG4_Ill_GATKHC_17875:HG4_Ill_SVrefine2DISCOVARDovetail_7970:HG4_Ill_manta_2669:HG4_Ill_scalpel_10229:HG4_Ill_svaba_13953:HG4_PB_HySA_16254:HG4_PB_pbsv_11166;NumExactMatchSVs=33;ClusterMaxShiftDist=0.118919;ClusterMaxSizeDiff=0.118919;ClusterMaxEditDist=0.118919;PBcalls=9;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=22;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-96;DistBack=1529;DistForward=21321;DistMin=1529;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=10:25035187-25035288;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:0|1:31:1:0:22:0|1:29:0:0:16:0/1:12:13:./.:.:.:.:.:.
chr10	25098081	HG3_Ill_GATKHCSBGrefine_7413	TAGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_11609:HG2_Ill_Krunchall_15165:HG4_PB_assemblyticsfalcon_2525:HG3_PB_assemblyticsfalcon_2573:HG2_PB_assemblyticsfalcon_2580:HG2_PB_assemblyticsPBcR_2528:HG2_PB_HySA_20145:HG4_PB_pbsv_11167:HG4_PB_HySA_16255:HG4_Ill_MetaSV_521:HG3_Ill_MetaSV_484:HG2_Ill_tnscope_1253:HG2_Ill_MetaSV_510:HG4_PB_SVrefine2PBcRDovetail_5615:HG4_Ill_svaba_13954:HG4_Ill_manta_2670:HG4_Ill_SVrefine2DISCOVARDovetail_7972:HG4_Ill_GATKHCSBGrefine_7691:HG4_10X_allpass_2135:HG3_PB_pbsv_10878:HG3_PB_SVrefine2PBcRDovetail_5222:HG3_PB_SVrefine2Falcon1Dovetail_6753:HG3_Ill_svaba_14015:HG3_Ill_manta_2558:HG3_Ill_SVrefine2DISCOVARDovetail_8182:HG3_Ill_GATKHCSBGrefine_7413:HG3_10X_allpass_2207:HG2_PB_pbsv_11151:HG2_PB_SVrefine2PBcRplusDovetail_1136:HG2_PB_SVrefine2PB10Xhap12_8138:HG2_PB_SVrefine2Falcon2Bionano_5351:HG2_PB_SVrefine2Falcon1plusDovetail_1188:HG2_Ill_svaba_13861:HG2_Ill_scalpel_10501:HG2_Ill_manta_3139:HG2_Ill_breakscan11_1615:HG2_Ill_SVrefine2DISCOVARplusDovetail_1310:HG2_Ill_GATKHCSBGrefine_7511:HG2_10X_allpass_1828:HG2_10X_SVrefine210Xhap12_7836:HG4_Ill_Spiral_910;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7836:HG2_10X_allpass_1828:HG2_Ill_GATKHCSBGrefine_7511:HG2_Ill_SVrefine2DISCOVARplusDovetail_1310:HG2_Ill_breakscan11_1615:HG2_Ill_manta_3139:HG2_Ill_scalpel_10501:HG2_Ill_svaba_13861:HG2_PB_SVrefine2Falcon1plusDovetail_1188:HG2_PB_SVrefine2Falcon2Bionano_5351:HG2_PB_SVrefine2PB10Xhap12_8138:HG2_PB_SVrefine2PBcRplusDovetail_1136:HG2_PB_pbsv_11151:HG3_10X_allpass_2207:HG3_Ill_GATKHCSBGrefine_7413:HG3_Ill_SVrefine2DISCOVARDovetail_8182:HG3_Ill_manta_2558:HG3_Ill_svaba_14015:HG3_PB_SVrefine2Falcon1Dovetail_6753:HG3_PB_SVrefine2PBcRDovetail_5222:HG3_PB_pbsv_10878:HG4_10X_allpass_2135:HG4_Ill_GATKHCSBGrefine_7691:HG4_Ill_SVrefine2DISCOVARDovetail_7972:HG4_Ill_manta_2670:HG4_Ill_svaba_13954:HG4_PB_SVrefine2PBcRDovetail_5615;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0447094;ClusterMaxSizeDiff=0.0447094;ClusterMaxEditDist=0.0447094;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-338;DistBack=35614;DistForward=10693;DistMin=10693;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=10:25098082-25098427;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=386.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:23:1:25:1/1:0:12:0:18:1/1:0:40:./.:1:12:.:.:.
chr10	25404032	HG4_Ill_SVrefine2DISCOVARDovetail_7974	ATCCTTCCCTCCCTCCCTTCCTTCCTCCCTTCCTCCCTCCCTCCCTCTCTCCCTCCATCCCTCCCTCCCTTCTCTACCTCCC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8140:HG2_PB_HySA_20147:HG2_PB_pbsv_11152:HG4_PB_pbsv_11168:HG4_Ill_SVrefine2DISCOVARDovetail_7974:HG2_PB_SVrefine2PBcRplusDovetail_1137;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8140:HG4_Ill_SVrefine2DISCOVARDovetail_7974:HG2_PB_SVrefine2PBcRplusDovetail_1137;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.0963855;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-81;DistBack=65267;DistForward=-82;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=284;REFWIDENED=10:25404033-25404397;PctSeqSimilarity=0.9625;PctSizeSimilarity=1;PctRecOverlap=0.6341;SizeDiff=0;StartDistance=-30;EndDistance=-30;GTMatch=0;TruScore=86;MatchId=387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:15:./.:19:2:4:11:0/0:13:1:16:1:0/0:19:1:./.:.:.:.:.:.
chr10	26181030	HG2_10X_SVrefine210Xhap12_7845	ACTCCTCTATAACCATCCTCAGCTGAACTCCTCTCAATGTTCAGATGCTCCTTATCTTCTCTCCTCTACAACCATCCTCAGCTGAACTCCTCTCAATGTTCAGATGCTCCTTATCTTCT	A	20	PASS	ClusterIDs=HG2_Ill_manta_3142:HG3_Ill_Krunchall_14886:HG2_Ill_Krunchall_15176:HG2_PB_pbsv_11157:HG3_PB_pbsv_10885:HG3_PB_SVrefine2PBcRDovetail_5229:HG3_Ill_MetaSV_486:HG3_Ill_GATKHCSBGrefine_7419:HG2_PB_SVrefine2Falcon2Bionano_5356:HG2_Ill_MetaSV_512:HG2_Ill_GATKHCSBGrefine_7515:HG2_10X_SVrefine210Xhap12_7845:HG2_Ill_SpiralSDKrefine_1627:HG3_Ill_Spiral_11620:HG2_Ill_Spiral_777;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7845:HG2_Ill_GATKHCSBGrefine_7515:HG2_Ill_MetaSV_512:HG2_PB_SVrefine2Falcon2Bionano_5356:HG3_Ill_GATKHCSBGrefine_7419:HG3_Ill_MetaSV_486:HG3_PB_SVrefine2PBcRDovetail_5229;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0168067;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.0502092;PBcalls=4;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-118;DistBack=15036;DistForward=3941;DistMin=3941;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=64;REFWIDENED=10:26181031-26181212;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:22:0|1:37:2:4:22:0|1:25:1:0:9:0/1:26:16:./.:.:.:.:.:.
chr10	26354751	HG2_Ill_MetaSV_513	CAAAAAGAGCAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTATAGTCCCAGCTACACGGGAGGCTGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_513:HG2_10X_allpass_1830:HG3_Ill_Krunchall_14893:HG2_Ill_Krunchall_15182:HG2_PB_assemblyticsfalcon_2588:HG2_PB_assemblyticsPBcR_2541:HG3_PB_HySA_16810:HG2_PB_HySA_20170:HG4_Ill_GATKHCSBGrefine_7698:HG3_PB_pbsv_10887:HG3_Ill_GATKHCSBGrefine_7422:HG2_PB_pbsv_11159:HG2_Ill_GATKHCSBGrefine_7518:HG4_Ill_manta_2671:HG3_PB_SVrefine2PBcRDovetail_5230:HG3_Ill_manta_2561:HG3_Ill_SVrefine2DISCOVARDovetail_8188:HG2_PB_SVrefine2PBcRplusDovetail_1142:HG2_PB_SVrefine2PB10Xhap12_8147:HG2_PB_SVrefine2Falcon1plusDovetail_1192:HG2_Ill_manta_3143:HG2_Ill_SVrefine2DISCOVARplusDovetail_1317:HG4_Ill_MetaSV_524:HG3_Ill_MetaSV_487:HG4_PB_pbsv_11174:HG4_PB_assemblyticsfalcon_2532:HG4_PB_SVrefine2PBcRDovetail_5621:HG4_Ill_SVrefine2DISCOVARDovetail_7978:HG4_Ill_MetaSV_523:HG4_10X_allpass_2136:HG3_PB_assemblyticsfalcon_2584:HG3_Ill_scalpel_10665:HG3_10X_allpass_2209;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_MetaSV_513:HG4_PB_pbsv_11174:HG4_PB_assemblyticsfalcon_2532:HG4_PB_SVrefine2PBcRDovetail_5621:HG4_Ill_SVrefine2DISCOVARDovetail_7978:HG4_Ill_MetaSV_523:HG4_10X_allpass_2136:HG3_PB_assemblyticsfalcon_2584:HG3_Ill_scalpel_10665:HG3_10X_allpass_2209;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0218409;ClusterMaxSizeDiff=0.0218409;ClusterMaxEditDist=0.0279938;PBcalls=14;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=3291;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=10:26354752-26355084;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9968;PctRecOverlap=0.9811;SizeDiff=1;StartDistance=-6;EndDistance=-5;GTMatch=0;TruScore=98;MatchId=389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:25:0|1:22:0:1:30:0|1:55:1:0:20:0/1:18:10:0/1:24:7:.:.:.
chr10	26608219	HG2_Ill_svaba_13877	CATGGACGTGCCACGGGTCCAGTGTTCTAGGAGTCTTTGCTCTCCAGAGAATGACCTTGCCGCCTCCATTCCATCATGCACTCCTCCCCTTATTCCTCAGCCTATGGGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7848:HG3_Ill_Krunchall_14896:HG2_Ill_Krunchall_15184:HG3_PB_pbsv_10889:HG3_Ill_svaba_14033:HG3_Ill_scalpel_10666:HG3_Ill_manta_2562:HG3_Ill_MetaSV_488:HG3_Ill_GATKHC_17778:HG3_Ill_GATKHCSBGrefine_7423:HG3_Ill_Cortex_375:HG3_CG_vcfBeta_6009:HG3_10X_allpass_2210:HG2_PB_pbsv_11161:HG2_Ill_svaba_13877:HG2_Ill_scalpel_10508:HG2_Ill_breakscan11_1617:HG2_Ill_SpiralSDKrefine_1631:HG2_Ill_SVrefine2DISCOVARplusDovetail_1318:HG2_Ill_MetaSV_514:HG2_Ill_GATKHC_17849:HG2_Ill_GATKHCSBGrefine_7519:HG2_Ill_Cortex_794:HG2_CG_vcfBeta_6311:HG2_10X_allpass_1831;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7848:HG3_PB_pbsv_10889:HG3_Ill_svaba_14033:HG3_Ill_scalpel_10666:HG3_Ill_manta_2562:HG3_Ill_MetaSV_488:HG3_Ill_GATKHC_17778:HG3_Ill_GATKHCSBGrefine_7423:HG3_Ill_Cortex_375:HG3_CG_vcfBeta_6009:HG3_10X_allpass_2210:HG2_PB_pbsv_11161:HG2_Ill_svaba_13877:HG2_Ill_scalpel_10508:HG2_Ill_breakscan11_1617:HG2_Ill_SpiralSDKrefine_1631:HG2_Ill_SVrefine2DISCOVARplusDovetail_1318:HG2_Ill_MetaSV_514:HG2_Ill_GATKHC_17849:HG2_Ill_GATKHCSBGrefine_7519:HG2_Ill_Cortex_794:HG2_CG_vcfBeta_6311:HG2_10X_allpass_1831;NumExactMatchSVs=23;ClusterMaxShiftDist=0.00921659;ClusterMaxSizeDiff=0.00921659;ClusterMaxEditDist=0.00921659;PBcalls=2;Illcalls=18;TenXcalls=3;CGcalls=2;PBexactcalls=2;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=2;HG2count=14;HG3count=11;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-108;DistBack=15809;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=10:26608220-26608330;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=390.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:27:0|1:36:1:0:25:0|1:27:0:0:29:0/1:37:23:./.:.:.:.:.:.
chr10	26767941	HG2_Ill_GATKHCSBGrefine_7520	TAAAAATTGACATATATTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_779:HG2_PB_HySA_20173:HG2_PB_assemblyticsfalcon_2591:HG2_PB_assemblyticsPBcR_2543:HG3_PB_assemblyticsfalcon_2586:HG4_PB_assemblyticsfalcon_2534:HG3_PB_pbsv_10890:HG4_Ill_MetaSV_525:HG3_Ill_MetaSV_489:HG2_Ill_tnscope_1254:HG2_Ill_MetaSV_515:HG4_PB_SVrefine2PBcRDovetail_5622:HG4_Ill_svaba_13966:HG4_Ill_scalpel_10238:HG4_Ill_manta_2672:HG4_Ill_SVrefine2DISCOVARDovetail_7981:HG4_Ill_GATKHCSBGrefine_7699:HG4_10X_allpass_2137:HG3_PB_SVrefine2PBcRDovetail_5232:HG3_PB_HySA_16813:HG3_Ill_svaba_14034:HG3_Ill_scalpel_10667:HG3_Ill_manta_2563:HG3_Ill_SVrefine2DISCOVARDovetail_8190:HG3_Ill_GATKHCSBGrefine_7424:HG3_10X_allpass_2211:HG2_PB_SVrefine2PBcRplusDovetail_1143:HG2_PB_SVrefine2PB10Xhap12_8150:HG2_PB_SVrefine2Falcon2Bionano_5357:HG2_PB_SVrefine2Falcon1plusDovetail_1193:HG2_Ill_svaba_13878:HG2_Ill_scalpel_10509:HG2_Ill_manta_3144:HG2_Ill_SVrefine2DISCOVARplusDovetail_1319:HG2_Ill_GATKHCSBGrefine_7520:HG2_10X_SVrefine210Xhap12_7849:HG4_PB_pbsv_11175:HG2_PB_pbsv_11162:HG2_Ill_breakscan11_1618:HG4_Ill_Spiral_911:HG3_Ill_Spiral_11625;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7849:HG2_Ill_GATKHCSBGrefine_7520:HG2_Ill_SVrefine2DISCOVARplusDovetail_1319:HG2_Ill_manta_3144:HG2_Ill_scalpel_10509:HG2_Ill_svaba_13878:HG2_PB_SVrefine2Falcon1plusDovetail_1193:HG2_PB_SVrefine2Falcon2Bionano_5357:HG2_PB_SVrefine2PB10Xhap12_8150:HG2_PB_SVrefine2PBcRplusDovetail_1143:HG3_10X_allpass_2211:HG3_Ill_GATKHCSBGrefine_7424:HG3_Ill_SVrefine2DISCOVARDovetail_8190:HG3_Ill_manta_2563:HG3_Ill_scalpel_10667:HG3_Ill_svaba_14034:HG3_PB_HySA_16813:HG3_PB_SVrefine2PBcRDovetail_5232:HG4_10X_allpass_2137:HG4_Ill_GATKHCSBGrefine_7699:HG4_Ill_SVrefine2DISCOVARDovetail_7981:HG4_Ill_manta_2672:HG4_Ill_scalpel_10238:HG4_Ill_svaba_13966:HG4_PB_SVrefine2PBcRDovetail_5622;NumExactMatchSVs=25;ClusterMaxShiftDist=0.103506;ClusterMaxSizeDiff=0.103506;ClusterMaxEditDist=0.103506;PBcalls=15;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=33863;DistForward=-291;DistMin=-291;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=10:26767942-26768263;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=391.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:81:1/1:2:38:0:13:1/1:0:26:0:25:1/1:0:43:./.:2:15:.:.:.
chr10	26998800	HG2_PB_SVrefine2Falcon2Bionano_5359	GGCTGGGCATGGTGGCTCATGCCTATAATCCCAGCATTCTGGGAGCCTGAGGCGGGTGGATCGTGAGATCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAGACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTGAATCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATCACGCCATTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTTGTCTTAAAAAAAAAAAAGTAGCATGTACCTAAAAATTCACTTTGTGATGTTTAGATTCTGACTTTAAGTCACTAAAGTCACTCAGGAATCTAGTCTGGCATCTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCACTGGAAGCTCTGCCTCCTGGGTTCACACCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCTGCCACTGTGCCCCGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGTGGTCTCAAGGTATGAGCCACCATGCCCGGCTAATTTTTTTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGAACTCATGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCAGCCCATAAAGCTCTTTTTTGATCTGGGTTCTTTAATAAAATGAGCTTGGGTTTTGCTGAGCTCTGTTGCAAGTTAGGTTCTCCAGGAGGCAGACTCTGAGATGAAGTTTAAAGGACAGGATGTTTATTCGGGATTATCCCCTGGGATTACTGACACCTGAGGGAGGGGGAGAGGATACAGGACTGGGTAGCAGGAGAAGCTGAGCTGGAATCAACAGCCTGAAACACCCTCTAGGGTGTGCAGGTAGAATGGCCCTTCATCTATCAGTCCCTGGATGTGGGCTGCCTCCCGAAGGGGCACAGCCTAAGGTGAGAGGACTCTTTGTAGCCAAGGCAATCCTTGAAGAGGCTAAGAAATGAAGGCCAACAGGTACCAACCATACCTGATACAGCAGCTGGGGCAGAGTCATGCACTGACGGGGGATCTGGGGGCATGTCTCAGAATCCACCACAACTCTGTTTTCTGGACGTGTCAAGTCTGAGTTATCTGTTGCATGGACTCAGTCTCAAAAAAAAAAAGTTTTTAAAATAAATTAATGAAATGTCTTCACAATTACATCATATAATCTATTGATGGAAATTCCAGTAGACCATGATGTACTAATACATCTCCCTAGTGTTGAACATTTGTATTATATTTCCCCTTCTCAGTAGATATTTAAGGAATGCCTAAGATTTGTCAGCACTGAATTTAATGACGCTGTAAGAATGAGTGTCAGATATTGCTTCTTAGTGGCTCCTCTCCTCTGCCCACAGCTTTCTCTGCCCTGCTGCTGGCCCTGCCTTGTCCAGTACATATTGCCATGCCCAGGTCTGGCTGCCACTTTAGCTGGGCTTTTCAAAGAGCTCTCAGTATATTTGTAGCAAGCAGTGAAATCTCTGGCATTGACCTTTAACCATTGTCAGGACCACTTTCACTTTACCGGAAGGCAGAGCAGCAAAAACGCTCCCTCTGAGCCAAACTTGAAATAACATCTCCTGCAGTCCAGAGCAGAGTTCCGCAGCCTCGGGACTGTTGAAATTTTGGGCCACATTGTTCTTTGTTGGGGGTCACTGGGGGCTGCCATGTGCATTACAGGATGTTTAGCAGCATCGCTGACTCTACCTACTAGATGCCCCCGAGTTGGTAACAATCAAAAATGCCTCCAGATACTGCCAAGTGTCCCATGGTCCCACGCAGCGCAGATTCGCCCCTGGTTGAGAATCACTGGTCTAGAGAATGTGTTTATATTTTTAATTTCTCTCTTAATATGTAATACAGTTCATTGCTCTCAGAAATAAACATGGGAAGGAAATTTTTTTTTTTACTGCTTTAAGTACTATCACCCACTGTCCCCATAATTGGAAGTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAATGGCACAATCCCAGCTCACTGCAACTTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGATGCACGCTACCACGCCCAGCCAATTTTGTGTTTTTAGTAGAGATAGGATTTCGCCATGTTGGCCAGGCTGGTCTCGAACACCTGGCCTCAGGTGATTCACCGGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCAGCCAATTTGAAGTTTTTTCAGCCTGCCTTATGGAAACTGTATAAATTGTTAGTTGCAGAAAACATAGGAGAATATAACAAAAGCCATTGCTAGTTTAAATAGTAAGTTCACTACTGCCCTCTCCAGGGAATGTCAGAGCTGCAGCCTTATTCTCCCTATAAGTGATTGGAGCAGGGCTTAGGAAAGTCACAGTGCAGAGACAGCGTCCGGCATGGGGACAAGTCACGGTTGTGGCGTGGGTTTGGGTGGTACAGTACCCTAGCAATTCTGCTCTCCAAGCCCCAACTTCCTGACAATACTTGCTTTCTGTGGACTCTTCTGGATCGGGCACTTAAAGGACTAAATATGTAGGTATTATTTCCATGCCACTTAAGAAGAAGGGATGAGGCTTCTGGAGAGCTGGGCCATTTGTGATTTTGCTTTTGCTGAGAAAGGCTTAGGACAGTAGGGGGAAATGGCAGCTAAAGATTCAGGAGCAGCACCATCCATGTTCAGTGCCAAGAGAGCCCCTCCAGCCTCAGTGGCCCCAGATCAGTGAACCTGACATTGAACCTGACAGGCTTGCTTGTTGGTGATGTCATAATGGAGGGATACTGTTTTAAACCTTTGACAATCAAAGTTTAATGGCTCTTAGGAGGCTTATCAGATGCTGTGTTTTTTTGTTTTTTTGTTTTTTTTTTTGCTTCTGAGGTATGTATTAAATTGGGGATTTTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7851:HG4_PB_assemblyticsfalcon_2538:HG2_PB_assemblyticsfalcon_2595:HG2_PB_assemblyticsPBcR_2549:HG4_10X_allpass_2138:HG4_PB_pbsv_11178:HG3_10X_allpass_2212:HG2_10X_allpass_1832:HG4_Ill_Krunchall_15454:HG3_PB_pbsv_10893:HG4_Ill_MetaSV_527:HG4_Ill_GATKHCSBGrefine_7703:HG3_Ill_MetaSV_492:HG2_PB_pbsv_11165:HG2_Ill_MetaSV_518:HG2_Ill_tnscope_1255:HG4_PB_SVrefine2PBcRDovetail_5623:HG4_Ill_SVrefine2DISCOVARDovetail_7985:HG3_Ill_SVrefine2DISCOVARDovetail_8191:HG2_PB_SVrefine2PBcRplusDovetail_1144:HG2_PB_SVrefine2PB10Xhap12_8152:HG2_PB_SVrefine2Falcon2Bionano_5359:HG2_PB_SVrefine2Falcon1plusDovetail_1195;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7851:HG4_PB_SVrefine2PBcRDovetail_5623:HG4_Ill_SVrefine2DISCOVARDovetail_7985:HG3_Ill_SVrefine2DISCOVARDovetail_8191:HG2_PB_SVrefine2PBcRplusDovetail_1144:HG2_PB_SVrefine2PB10Xhap12_8152:HG2_PB_SVrefine2Falcon2Bionano_5359:HG2_PB_SVrefine2Falcon1plusDovetail_1195;NumExactMatchSVs=8;ClusterMaxShiftDist=0.192224;ClusterMaxSizeDiff=0.192224;ClusterMaxEditDist=0.192224;PBcalls=11;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-3140;DistBack=5787;DistForward=-2912;DistMin=-2912;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=286;REFWIDENED=10:26998801-27002226;PctSeqSimilarity=0.9093;PctSizeSimilarity=0.9994;PctRecOverlap=0.9316;SizeDiff=2;StartDistance=-215;EndDistance=-213;GTMatch=0;TruScore=94;MatchId=392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:81:0|1:34:2:1:37:./.:18:2:66:0:0/0:70:0:0/1:222:95:3037:.:.
chr10	29883209	HG2_Ill_GATKHCSBGrefine_7537	GATCTGAAACACTCCTAGGTCCCAACCATTTCGGATGAGAGATACTCAACCTGTAT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_11202:HG2_PB_pbsv_11190:HG4_PB_HySA_16295:HG4_Ill_svaba_13996:HG4_Ill_scalpel_10257:HG4_Ill_manta_2676:HG4_Ill_GATKHC_17936:HG4_Ill_GATKHCSBGrefine_7722:HG4_Ill_250bpfermikitraw_14785:HG4_Ill_150bpfermikitraw_14163:HG4_CG_vcfBeta_7117:HG2_PB_assemblyticsfalcon_2632:HG2_Ill_svaba_13914:HG2_Ill_manta_3151:HG2_Ill_SpiralSDKrefine_1654:HG2_Ill_Krunchall_15223:HG2_Ill_GATKHC_17899:HG2_Ill_GATKHCSBGrefine_7537:HG2_Ill_250bpfermikitraw_14910:HG2_Ill_150bpfermikitraw_14010:HG2_CG_vcfBeta_6329:HG2_10X_allpass_1833:HG4_Ill_Krunchall_15482;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_1833:HG2_CG_vcfBeta_6329:HG2_Ill_150bpfermikitraw_14010:HG2_Ill_250bpfermikitraw_14910:HG2_Ill_GATKHCSBGrefine_7537:HG2_Ill_GATKHC_17899:HG2_Ill_Krunchall_15223:HG2_Ill_SpiralSDKrefine_1654:HG2_Ill_manta_3151:HG2_Ill_svaba_13914:HG2_PB_assemblyticsfalcon_2632:HG4_CG_vcfBeta_7117:HG4_Ill_150bpfermikitraw_14163:HG4_Ill_250bpfermikitraw_14785:HG4_Ill_GATKHCSBGrefine_7722:HG4_Ill_GATKHC_17936:HG4_Ill_manta_2676:HG4_Ill_scalpel_10257:HG4_Ill_svaba_13996;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.0535714;PBcalls=4;Illcalls=16;TenXcalls=1;CGcalls=2;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=2;HG2count=12;HG3count=0;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-55;DistBack=15191;DistForward=10027;DistMin=10027;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=10:29883208-29883266;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=393.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:21:0|1:39:0:0:20:0|1:28:0:0:18:0/1:21:29:./.:.:.:.:.:.
chr10	29918521	HG2_Ill_manta_3152	GTATGTGCCCAAGCTTGGGCAAGCATTTCTAACCCTCAGTTTTTTCCTCAGTAGAATGAAGACAATTGCACTAATATTTCTTGGGGGCTACTGTAAAAATTAGAGTCCGGGCGTGGTGGCTCACACCTGTAATCCCAGTGCCTTGAGAGGCCTTAATGGGAGGATAGCTTGAGGCCAGGAGCTCAAGACCAGCCTGAGCAACATAGTGAGACCCCTGCCTCTAGAATTTTTTTTTTTAATTAGCTGGGCATAGTAGTGATTGCCTATAGTCCCAGCTACTCGGGAGGCTGAGGAAGGAGGAATGCTTGAGCCCAGGAGTTCGAGGCTGCAGTGAACCATGGTCATGCCATTGCATTCCAACCTGGGTGACCAGGCAAGACTGTCTCAAAAAATAAAAATAATTAAGTGATATATTGTAGAGGTAAAGAGTGTGGCATTAAGTCTGGCACACAGTAATAATGGATGGCATGT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1208:HG2_10X_allpass_1834:HG3_PB_pbsv_10916:HG2_PB_SVrefine2PB10Xhap12_8167:HG3_PB_assemblyticsfalcon_2632:HG2_PB_assemblyticsfalcon_2634:HG2_PB_assemblyticsPBcR_2586:HG2_PB_HySA_20212:HG2_PB_PB10Xdip_3671:HG2_PB_PB10Xdip_3670:HG2_Ill_Krunchall_15224:HG3_Ill_MetaSV_499:HG4_PB_assemblyticsfalcon_2567:HG4_PB_SVrefine2Falcon1Dovetail_6805:HG3_Ill_manta_2566:HG3_Ill_GATKHCSBGrefine_7442:HG3_10X_allpass_2216:HG2_PB_pbsv_11191:HG2_PB_assemblyticsfalcon_2633:HG2_PB_SVrefine2PB10Xhap12_8166:HG2_PB_SVrefine2Falcon1plusDovetail_1209:HG2_Ill_manta_3152:HG2_Ill_breakscan11_1620:HG2_Ill_MetaSV_527:HG2_Ill_GATKHCSBGrefine_7538:HG2_Ill_tnscope_1257:HG3_PB_SVrefine2PBcRDovetail_5245:HG3_Ill_SVrefine2DISCOVARDovetail_8211:HG2_PB_SVrefine2PBcRplusDovetail_1155:HG2_PB_SVrefine2Falcon2Bionano_5369;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7538:HG2_Ill_MetaSV_527:HG2_Ill_breakscan11_1620:HG2_Ill_manta_3152:HG2_PB_PB10Xdip_3670:HG4_PB_assemblyticsfalcon_2567:HG4_PB_SVrefine2Falcon1Dovetail_6805:HG3_Ill_manta_2566:HG3_Ill_GATKHCSBGrefine_7442:HG3_10X_allpass_2216:HG2_PB_pbsv_11191:HG2_PB_assemblyticsfalcon_2633:HG2_PB_SVrefine2PB10Xhap12_8166:HG2_PB_SVrefine2Falcon1plusDovetail_1209;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0552017;ClusterMaxSizeDiff=0.0552017;ClusterMaxEditDist=0.0552017;PBcalls=18;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-470;DistBack=-471;DistForward=65719;DistMin=-471;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=10:29918517-29918994;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=394.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:19:35:0|1:18:3:1:23:1|0:0:33:49:0:0/1:54:21:0/1:61:8:.:.:.
chr10	31443332	HG2_PB_SVrefine2Falcon2Bionano_5371	TACCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCAGAGCTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAACCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAATAAAAAAGACAGGAAGAGAGGGGGGGAGGAGATGCCAGGCTCTTTTAAACAACCACTTCTCATAGGAACTAAGAATAAGAATTCACTCACTCCTGCAAGAATGGCACCAAGCCATTCATGAGGGATCTACCCCCATGGCCCAAATGCCCCGCACCAGGCCCCACCCCCAACAGTGGGGATAAAATTTCAACATGAGACTTGGTGAAGACAAACAAACCATACCTAAACCACCACAGTCTCCATTCAAGGAGAACTGATATTGAAGCACAGTCTTCTCTTGACCCAACCACCCTTTCCATCAGATCCTCCAAAGGCCAAAAAAACATTTAGCTAGTTAGACAGTCCAGAAAGAGGAATTTCTTATCAGAAAGGGCTCTGCAAGAAGACCAACCTGACTTTCCCCCTCCTTCTCTTCTTTACTACGTTCTTTGCCTGACTTAGCCAGGCAAGCTCTTACCGCAGTCTACTCTTCTTGATGGCACTGATGGGAAGGAAGTAGAAGAGACCCACATCTAAGTTTTCTTATAAAAACTTCTTGATCATTTTGGTCAAAAGTACAGTGAGCACATGGTGTGTATATAAATGTACCTAAACCATTGAAATAGCTGGGGATGTGCAGTCATAAGTCACTTAATGTGCTGTTAGGTGATTTCATCATTGTGCAAACATACCGGAGTGCACTTACACAAACCTACATGGTTGAACTTCCTACACGCCTAGGCTACATGGTATAGCCTATTGTTCTCAGGCTGCAAACTTAACCCAGGGTCCCTAGGTTTTTGGGTATGGACTGTGAAAAAGTACCCACTAGTACCTGTTGTACCTTAAGTTCTTCTTGTTTCCAAAAATTCCAGGAAGAAGCTCAGCCCTGGAAAAGCAAAAACCCATTGGATCCAGAGGTGCCTGAGTTGGAGATGAACTTTGGAACTTCCCTCATAACCGTACTAAAATCCCTGACCAGAGAGTAACTTATTTGCCATTTTCTATACATGTGACATATGTAGAAGCATGATCAATGACAGCACATGTGCTATTAATATCTTGCTCCATCTCGACATACAGTGACTCAGCTCACCAGGCCAACAAAAGGCCTGTTTTCACCTTTGATTGGAGGAGGCACTCCTTTGAGAACTATCCCCCATGTCCTCCTCATTTGTTGCCACTAATAAAATCCCTTTAAGTCCCCATTGCTTAAGTCCCCATTGGTTGTGGTCACTGGACTGCCACCTGCCATGTGATGGCACTGACCCGTTGTATGGGTAACAAAACTTATACAGTGTATCACTGTCCTGGATACTGCAGGCAATTGGAATGCAATGCTAAGCATTTGCATAACTAAACATAGAAAAGGTACAGTAGGACTAGGTGTGATGGCTCAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7867:HG2_10X_allpass_1835:HG2_PB_assemblyticsPBcR_2600:HG4_Ill_Krunchall_15501:HG4_PB_assemblyticsfalcon_2585:HG3_PB_assemblyticsfalcon_2651:HG2_PB_assemblyticsfalcon_2649:HG3_PB_pbsv_10923:HG4_Ill_MetaSV_534:HG2_PB_HySA_20235:HG2_Ill_tnscope_1258:HG4_PB_pbsv_11207:HG3_Ill_MetaSV_501:HG3_Ill_GATKHCSBGrefine_7448:HG3_10X_allpass_2217:HG2_PB_pbsv_11197:HG2_Ill_MetaSV_530:HG2_Ill_GATKHCSBGrefine_7542:HG4_PB_SVrefine2PBcRDovetail_5635:HG3_Ill_SVrefine2DISCOVARDovetail_8218:HG2_PB_SVrefine2PBcRplusDovetail_1157:HG2_PB_SVrefine2PB10Xhap12_8169:HG2_PB_SVrefine2Falcon2Bionano_5371:HG2_PB_SVrefine2Falcon1plusDovetail_1211:HG2_Ill_SVrefine2DISCOVARplusDovetail_1344;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7867:HG4_PB_SVrefine2PBcRDovetail_5635:HG3_Ill_SVrefine2DISCOVARDovetail_8218:HG2_PB_SVrefine2PBcRplusDovetail_1157:HG2_PB_SVrefine2PB10Xhap12_8169:HG2_PB_SVrefine2Falcon2Bionano_5371:HG2_PB_SVrefine2Falcon1plusDovetail_1211:HG2_Ill_SVrefine2DISCOVARplusDovetail_1344;NumExactMatchSVs=8;ClusterMaxShiftDist=0.138765;ClusterMaxSizeDiff=0.138765;ClusterMaxEditDist=0.138765;PBcalls=13;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1514;DistBack=96780;DistForward=7211;DistMin=7211;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=10:31443333-31444882;PctSeqSimilarity=0.9779;PctSizeSimilarity=1;PctRecOverlap=0.9881;SizeDiff=0;StartDistance=-18;EndDistance=-18;GTMatch=0;TruScore=98;MatchId=395.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:0:22:0:7:1/1:1:22:0:17:./.:3:27:./.:5:95:.:.:.
chr10	32257880	HG2_Ill_MetaSV_531	GAAAAGATATTAGTTGCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCATGCCGAGCCAAAGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTTTTTTTTTGGTGGAGATGGGGTTTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCGCGAGTGATCCGCCAGCCTCGGCCTCCCGAGGTGCCGGGATTGCAGATGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATATGAGGAGCCCCTCTGCCTGGCTGCCCAGTGTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGAAGCGCCTCTTCCCCGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCACCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAACCCTGTCTGGGAGGTGAGGAGTGTCTCTGCCCGGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCTGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCGGCCAGCCGCCCCGGCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAACCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGAACAGCCCCCCGCCCGGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGCGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCTGGGAGGTGAGGGGCACTTCTGCCGGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCTGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAGACATGTGCTGTGTCCACTCAGGGTTAGATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTGAACAGATGCTTGAGGGCAGCATGCTCGTTGAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACGCTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAATAAAAAATAAAAAAAAAAAAGAAAAAAATAAATAAATAAATAAATAAATAAATACTCAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7870:HG4_PB_pbsv_11210:HG2_PB_assemblyticsPBcR_2604:HG4_10X_allpass_2139:HG2_10X_allpass_1837:HG3_10X_allpass_2218:HG4_PB_assemblyticsfalcon_2593:HG3_PB_assemblyticsfalcon_2657:HG3_Ill_Krunchall_14950:HG2_Ill_Krunchall_15246:HG2_Ill_tnscope_1259:HG4_Ill_SVrefine2DISCOVARDovetail_8004:HG4_Ill_MetaSV_535:HG4_Ill_GATKHCSBGrefine_7724:HG3_PB_pbsv_10926:HG3_Ill_SVrefine2DISCOVARDovetail_8221:HG3_Ill_MetaSV_502:HG3_Ill_GATKHCSBGrefine_7449:HG2_PB_pbsv_11199:HG2_PB_SVrefine2PBcRplusDovetail_1160:HG2_PB_SVrefine2PB10Xhap12_8172:HG2_PB_SVrefine2Falcon2Bionano_5374:HG2_PB_SVrefine2Falcon1plusDovetail_1214:HG2_Ill_breakscan11_1621:HG2_Ill_SpiralSDKrefine_1670:HG2_Ill_SVrefine2DISCOVARplusDovetail_1349:HG2_Ill_MetaSV_531:HG2_Ill_GATKHCSBGrefine_7544;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7870:HG4_Ill_SVrefine2DISCOVARDovetail_8004:HG4_Ill_MetaSV_535:HG4_Ill_GATKHCSBGrefine_7724:HG3_PB_pbsv_10926:HG3_Ill_SVrefine2DISCOVARDovetail_8221:HG3_Ill_MetaSV_502:HG3_Ill_GATKHCSBGrefine_7449:HG2_PB_pbsv_11199:HG2_PB_SVrefine2PBcRplusDovetail_1160:HG2_PB_SVrefine2PB10Xhap12_8172:HG2_PB_SVrefine2Falcon2Bionano_5374:HG2_PB_SVrefine2Falcon1plusDovetail_1214:HG2_Ill_breakscan11_1621:HG2_Ill_SpiralSDKrefine_1670:HG2_Ill_SVrefine2DISCOVARplusDovetail_1349:HG2_Ill_MetaSV_531:HG2_Ill_GATKHCSBGrefine_7544;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0106383;ClusterMaxSizeDiff=0.0106383;ClusterMaxEditDist=0.0106383;PBcalls=10;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2732;DistBack=609;DistForward=-2732;DistMin=-2732;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=10:32257881-32260627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=396.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:46:0|1:24:1:7:25:0|1:56:0:0:48:0/1:19:21:0/1:170:88:2728:.:.
chr10	32705726	HG4_Ill_manta_2678	AATATTCTATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATAT	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_533:HG2_10X_allpass_1838:HG4_PB_pbsv_11213:HG4_Ill_Krunchall_15514:HG2_PB_assemblyticsPBcR_2613:HG4_PB_assemblyticsfalcon_2601:HG3_PB_assemblyticsfalcon_2665:HG2_PB_assemblyticsfalcon_2664:HG3_PB_pbsv_10929:HG3_Ill_Krunchall_14956:HG2_Ill_Krunchall_15252:HG4_PB_SVrefine2PBcRDovetail_5638:HG4_Ill_scalpel_10276:HG4_Ill_manta_2678:HG4_Ill_SVrefine2DISCOVARDovetail_8009:HG4_Ill_GATKHCSBGrefine_7728:HG4_10X_allpass_2140:HG3_PB_HySA_16892:HG3_Ill_scalpel_10718:HG3_Ill_manta_2568:HG3_Ill_SVrefine2DISCOVARDovetail_8224:HG3_Ill_GATKHCSBGrefine_7453:HG3_10X_allpass_2219:HG2_PB_pbsv_11204:HG2_PB_SVrefine2PBcRplusDovetail_1164:HG2_PB_SVrefine2PB10Xhap12_8176:HG2_PB_SVrefine2Falcon2Bionano_5377:HG2_PB_SVrefine2Falcon1plusDovetail_1217:HG2_Ill_scalpel_10560:HG2_Ill_manta_3155:HG2_Ill_SVrefine2DISCOVARplusDovetail_1353:HG2_Ill_GATKHCSBGrefine_7549:HG2_10X_SVrefine210Xhap12_7873:HG4_Ill_Spiral_915:HG4_Ill_MetaSV_536:HG3_Ill_MetaSV_504:HG2_Ill_tnscope_1260:HG2_Ill_Spiral_783;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7873:HG2_Ill_GATKHCSBGrefine_7549:HG2_Ill_SVrefine2DISCOVARplusDovetail_1353:HG2_Ill_manta_3155:HG2_Ill_scalpel_10560:HG2_PB_SVrefine2Falcon1plusDovetail_1217:HG2_PB_SVrefine2Falcon2Bionano_5377:HG2_PB_SVrefine2PB10Xhap12_8176:HG2_PB_SVrefine2PBcRplusDovetail_1164:HG2_PB_pbsv_11204:HG3_10X_allpass_2219:HG3_Ill_GATKHCSBGrefine_7453:HG3_Ill_SVrefine2DISCOVARDovetail_8224:HG3_Ill_manta_2568:HG3_Ill_scalpel_10718:HG3_PB_HySA_16892:HG4_10X_allpass_2140:HG4_Ill_GATKHCSBGrefine_7728:HG4_Ill_SVrefine2DISCOVARDovetail_8009:HG4_Ill_manta_2678:HG4_Ill_scalpel_10276:HG4_PB_SVrefine2PBcRDovetail_5638;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0628743;ClusterMaxSizeDiff=0.0628743;ClusterMaxEditDist=0.0628743;PBcalls=13;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-338;DistBack=15716;DistForward=-328;DistMin=-328;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=10:32705727-32706075;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=397.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:68:1/1:1:38:0:27:1/1:0:26:0:25:1/1:0:50:./.:2:19:.:.:.
chr10	33097530	HG3_Ill_GATKHCSBGrefine_7455	AGGCCCAAGGATTAGCCTGCCTGGACTCACTAATCCTGATGCTCACATATATCACCTAGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7875:HG3_PB_HySA_16895:HG2_PB_pbsv_11207:HG3_PB_pbsv_10931:HG3_Ill_svaba_14100:HG3_Ill_scalpel_10719:HG3_Ill_manta_2570:HG3_Ill_Krunchall_14959:HG3_Ill_GATKHC_17855:HG3_Ill_GATKHCSBGrefine_7455:HG3_Ill_Cortex_384:HG3_Ill_250bpfermikitraw_14538:HG3_Ill_150bpfermikitraw_14070:HG3_10X_allpass_2220:HG2_PB_HySA_20261:HG2_Ill_svaba_13943:HG2_Ill_scalpel_10565:HG2_Ill_breakscan11_1622:HG2_Ill_SpiralSDKrefine_1680:HG2_Ill_Krunchall_15261:HG2_Ill_GATKHC_17943:HG2_Ill_GATKHCSBGrefine_7551:HG2_Ill_Cortex_819:HG2_Ill_250bpfermikitraw_14942:HG2_Ill_150bpfermikitraw_14045:HG3_Ill_SVrefine2DISCOVARDovetail_8227:HG2_PB_SVrefine2Falcon2Bionano_5379;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14045:HG2_Ill_250bpfermikitraw_14942:HG2_Ill_Cortex_819:HG2_Ill_GATKHCSBGrefine_7551:HG2_Ill_GATKHC_17943:HG2_Ill_Krunchall_15261:HG2_Ill_SpiralSDKrefine_1680:HG2_Ill_breakscan11_1622:HG2_Ill_scalpel_10565:HG2_Ill_svaba_13943:HG2_PB_HySA_20261:HG3_10X_allpass_2220:HG3_Ill_150bpfermikitraw_14070:HG3_Ill_250bpfermikitraw_14538:HG3_Ill_Cortex_384:HG3_Ill_GATKHCSBGrefine_7455:HG3_Ill_GATKHC_17855:HG3_Ill_Krunchall_14959:HG3_Ill_manta_2570:HG3_Ill_scalpel_10719:HG3_Ill_svaba_14100:HG3_PB_pbsv_10931;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0336134;PBcalls=5;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-59;DistBack=-21;DistForward=19777;DistMin=-21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=10:33097523-33097600;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=398.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:16:0|1:25:4:1:13:0|1:32:1:0:21:0/1:32:26:./.:.:.:.:.:.
chr10	33492640	HG3_Ill_manta_2571	TCAAAGACTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1623:HG2_PB_SVrefine2PB10Xhap12_8181:HG3_PB_assemblyticsfalcon_2673:HG2_PB_assemblyticsfalcon_2674:HG2_PB_assemblyticsPBcR_2622:HG3_Ill_Krunchall_14963:HG2_PB_PB10Xdip_3702:HG2_PB_PB10Xdip_3703:HG2_PB_pbsv_11210:HG2_PB_HySA_20269:HG3_PB_HySA_16898:HG3_Ill_MetaSV_505:HG2_Ill_tnscope_1261:HG4_PB_assemblyticsfalcon_2606:HG3_PB_pbsv_10933:HG3_Ill_scalpel_10722:HG3_Ill_manta_2571:HG3_Ill_SVrefine2DISCOVARDovetail_8231:HG3_Ill_GATKHCSBGrefine_7456:HG3_10X_allpass_2222:HG2_PB_SVrefine2PBcRplusDovetail_1169:HG2_PB_SVrefine2PB10Xhap12_8180:HG2_PB_SVrefine2Falcon1plusDovetail_1220:HG2_Ill_scalpel_10568:HG2_Ill_manta_3157:HG2_Ill_SVrefine2DISCOVARplusDovetail_1358:HG2_Ill_MetaSV_534:HG2_Ill_GATKHCSBGrefine_7554:HG2_10X_SVrefine210Xhap12_7877;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7877:HG2_Ill_GATKHCSBGrefine_7554:HG2_Ill_MetaSV_534:HG2_Ill_SVrefine2DISCOVARplusDovetail_1358:HG2_Ill_manta_3157:HG2_Ill_scalpel_10568:HG2_PB_SVrefine2Falcon1plusDovetail_1220:HG2_PB_SVrefine2PB10Xhap12_8180:HG2_PB_SVrefine2PBcRplusDovetail_1169:HG3_10X_allpass_2222:HG3_Ill_GATKHCSBGrefine_7456:HG3_Ill_SVrefine2DISCOVARDovetail_8231:HG3_Ill_manta_2571:HG3_Ill_scalpel_10722:HG3_PB_pbsv_10933:HG4_PB_assemblyticsfalcon_2606;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.0952381;PBcalls=14;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-289;DistBack=-76;DistForward=39629;DistMin=-76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=10:33492641-33492943;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=399.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:32:0|1:22:0:1:47:0|1:40:0:0:18:0/1:16:22:./.:.:.:.:.:.
chr10	34017766	HG4_Ill_150bpfermikitraw_14197	TCTTATGTCGAGAACCCAGGCAGGAAATTCTAACAGCCAGATCAAGGCCACATATTTAAGGCTTGGCCTTCAGGTACAGGGAGCGGGAAGGTA	T	20	PASS	ClusterIDs=HG2_PB_HySA_20272:HG4_PB_pbsv_11219:HG4_PB_HySA_16326:HG4_PB_SVrefine2PBcRDovetail_5641:HG4_Ill_svaba_14027:HG4_Ill_Krunchall_15529:HG4_Ill_GATKHC_17977:HG4_Ill_GATKHCSBGrefine_7732:HG4_Ill_Cortex_372:HG4_Ill_250bpfermikitraw_14824:HG4_Ill_150bpfermikitraw_14197:HG4_CG_vcfBeta_7129:HG2_PB_pbsv_11211:HG2_PB_SVrefine2Falcon2Bionano_5380:HG2_Ill_svaba_13950:HG2_Ill_scalpel_10571:HG2_Ill_breakscan11_1624:HG2_Ill_SpiralSDKrefine_1687:HG2_Ill_SVrefine2DISCOVARplusDovetail_1360:HG2_Ill_Krunchall_15268:HG2_Ill_GATKHC_17949:HG2_Ill_GATKHCSBGrefine_7555:HG2_Ill_Cortex_825:HG2_Ill_250bpfermikitraw_14949:HG2_Ill_150bpfermikitraw_14050:HG2_CG_vcfBeta_6349:HG2_10X_SVrefine210Xhap12_7879:HG2_PB_HySA_20273;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7879:HG2_CG_vcfBeta_6349:HG2_Ill_150bpfermikitraw_14050:HG2_Ill_250bpfermikitraw_14949:HG2_Ill_Cortex_825:HG2_Ill_GATKHCSBGrefine_7555:HG2_Ill_GATKHC_17949:HG2_Ill_Krunchall_15268:HG2_Ill_SVrefine2DISCOVARplusDovetail_1360:HG2_Ill_SpiralSDKrefine_1687:HG2_Ill_breakscan11_1624:HG2_Ill_scalpel_10571:HG2_Ill_svaba_13950:HG2_PB_SVrefine2Falcon2Bionano_5380:HG2_PB_pbsv_11211:HG4_CG_vcfBeta_7129:HG4_Ill_150bpfermikitraw_14197:HG4_Ill_250bpfermikitraw_14824:HG4_Ill_Cortex_372:HG4_Ill_GATKHCSBGrefine_7732:HG4_Ill_GATKHC_17977:HG4_Ill_Krunchall_15529:HG4_Ill_svaba_14027:HG4_PB_SVrefine2PBcRDovetail_5641;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0932643;ClusterMaxSizeDiff=0.0932643;ClusterMaxEditDist=0.0932643;PBcalls=7;Illcalls=18;TenXcalls=1;CGcalls=2;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=2;HG2count=17;HG3count=0;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-92;DistBack=107003;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=10:34017767-34017859;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=400.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:27:0|1:45:3:1:23:1|0:0:17:26:0:0/1:29:28:./.:.:.:.:.:.
chr10	34684468	HG2_PB_SVrefine2Falcon2Bionano_5382	CAAGAAAAACATCATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1625:HG2_PB_assemblyticsPBcR_2633:HG3_PB_assemblyticsfalcon_2677:HG2_PB_assemblyticsfalcon_2683:HG2_PB_pbsv_11215:HG3_PB_pbsv_10939:HG2_PB_HySA_20283:HG3_Ill_MetaSV_506:HG2_Ill_tnscope_1262:HG2_Ill_MetaSV_535:HG4_PB_assemblyticsfalcon_2611:HG4_PB_SVrefine2Falcon1Dovetail_6810:HG4_Ill_manta_2680:HG4_Ill_GATKHCSBGrefine_7733:HG4_10X_allpass_2141:HG3_Ill_manta_2572:HG3_Ill_GATKHCSBGrefine_7457:HG3_10X_allpass_2223:HG2_PB_SVrefine2PBcRplusDovetail_1171:HG2_PB_SVrefine2PB10Xhap12_8183:HG2_PB_SVrefine2Falcon2Bionano_5382:HG2_PB_SVrefine2Falcon1plusDovetail_1223:HG2_Ill_scalpel_10581:HG2_Ill_manta_3158:HG2_Ill_SVrefine2DISCOVARplusDovetail_1363:HG2_Ill_GATKHCSBGrefine_7556:HG2_10X_allpass_1840:HG2_10X_SVrefine210Xhap12_7882:HG4_PB_pbsv_11221;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7882:HG2_10X_allpass_1840:HG2_Ill_GATKHCSBGrefine_7556:HG2_Ill_SVrefine2DISCOVARplusDovetail_1363:HG2_Ill_manta_3158:HG2_Ill_scalpel_10581:HG2_PB_SVrefine2Falcon1plusDovetail_1223:HG2_PB_SVrefine2Falcon2Bionano_5382:HG2_PB_SVrefine2PB10Xhap12_8183:HG2_PB_SVrefine2PBcRplusDovetail_1171:HG3_10X_allpass_2223:HG3_Ill_GATKHCSBGrefine_7457:HG3_Ill_manta_2572:HG4_10X_allpass_2141:HG4_Ill_GATKHCSBGrefine_7733:HG4_Ill_manta_2680:HG4_PB_SVrefine2Falcon1Dovetail_6810:HG4_PB_assemblyticsfalcon_2611;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.0909091;PBcalls=13;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-326;DistForward=36175;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=10:34684469-34684808;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:31:0:23:1/1:0:15:0:14:1/1:0:40:0/1:3:8:.:.:.
chr10	36031819	HG2_Ill_GATKHC_17971	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_11221:HG4_Ill_GATKHC_17995:HG4_Ill_GATKHCSBGrefine_7737:HG3_Ill_GATKHC_17887:HG3_Ill_GATKHCSBGrefine_7461:HG2_Ill_GATKHC_17971:HG2_Ill_GATKHCSBGrefine_7558:HG4_PB_HySA_16343:HG3_Ill_manta_2575:HG2_PB_PB10Xdip_3717:HG2_PB_PB10Xdip_3716:HG4_Ill_GATKHC_17994:HG4_Ill_GATKHCSBGrefine_7736:HG2_Ill_GATKHC_17970:HG2_Ill_GATKHCSBGrefine_7557:HG2_PB_assemblyticsPBcR_2642:HG2_Ill_manta_3159:HG2_PB_assemblyticsfalcon_2697:HG4_PB_assemblyticsfalcon_2625:HG3_PB_assemblyticsfalcon_2689:HG4_Ill_Krunchall_15548:HG4_Ill_150bpfermikitraw_14214:HG4_10X_allpass_2143:HG2_Ill_150bpfermikitraw_14070:HG2_10X_allpass_1841:HG3_Ill_Krunchall_14991:HG4_PB_pbsv_11231:HG2_PB_HySA_20294:HG3_PB_pbsv_10946;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7558:HG2_Ill_GATKHC_17971:HG3_Ill_GATKHCSBGrefine_7461:HG3_Ill_GATKHC_17887:HG4_Ill_GATKHCSBGrefine_7737:HG4_Ill_GATKHC_17995;NumExactMatchSVs=6;ClusterMaxShiftDist=0.165605;ClusterMaxSizeDiff=0.165605;ClusterMaxEditDist=0.178344;PBcalls=11;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-75;DistBack=13518;DistForward=-44;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=10:36031818-36031897;PctSeqSimilarity=0.931;PctSizeSimilarity=0.9036;PctRecOverlap=0.8571;SizeDiff=-8;StartDistance=12;EndDistance=4;GTMatch=0;TruScore=89;MatchId=403.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:53:1/1:3:21:0:28:./.:4:8:1:11:0/1:4:15:./.:.:.:.:.:.
chr10	36411867	HG2_Ill_breakscan11_1626	ACCCAATGTGTAGTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_10947:HG2_PB_assemblyticsPBcR_2644:HG2_Ill_Krunchall_15287:HG3_Ill_Spiral_11698:HG2_PB_pbsv_11222:HG4_PB_SVrefine2Falcon1Dovetail_6811:HG2_PB_HySA_20298:HG2_Ill_MetaSV_536:HG4_PB_assemblyticsfalcon_2628:HG3_PB_assemblyticsfalcon_2692:HG3_Ill_manta_2576:HG3_Ill_GATKHCSBGrefine_7463:HG2_PB_assemblyticsfalcon_2699:HG2_PB_SVrefine2PBcRplusDovetail_1176:HG2_PB_SVrefine2PB10Xhap12_8190:HG2_PB_SVrefine2Falcon2Bionano_5388:HG2_PB_SVrefine2Falcon1plusDovetail_1231:HG2_Ill_scalpel_10590:HG2_Ill_manta_3160:HG2_Ill_breakscan11_1626:HG2_Ill_SpiralSDKrefine_1699:HG2_Ill_GATKHCSBGrefine_7559:HG2_10X_allpass_1842:HG2_10X_SVrefine210Xhap12_7891;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7891:HG2_10X_allpass_1842:HG2_Ill_GATKHCSBGrefine_7559:HG2_Ill_SpiralSDKrefine_1699:HG2_Ill_breakscan11_1626:HG2_Ill_manta_3160:HG2_Ill_scalpel_10590:HG2_PB_SVrefine2Falcon1plusDovetail_1231:HG2_PB_SVrefine2Falcon2Bionano_5388:HG2_PB_SVrefine2PB10Xhap12_8190:HG2_PB_SVrefine2PBcRplusDovetail_1176:HG2_PB_assemblyticsfalcon_2699:HG3_Ill_GATKHCSBGrefine_7463:HG3_Ill_manta_2576:HG3_PB_assemblyticsfalcon_2692:HG4_PB_assemblyticsfalcon_2628;NumExactMatchSVs=16;ClusterMaxShiftDist=0.11236;ClusterMaxSizeDiff=0.11236;ClusterMaxEditDist=0.11236;PBcalls=12;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=-169;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=10:36411868-36412204;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:23:0|1:30:1:1:29:0|1:35:0:0:28:0/1:28:15:0/1:30:12:.:.:.
chr10	38271985	HG4_Ill_scalpel_10306	TAAGACAGACACTCCCCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7900:HG4_PB_HySA_16361:HG4_PB_SVrefine2Falcon1Dovetail_6813:HG2_PB_assemblyticsPBcR_2660:HG3_PB_assemblyticsfalcon_2712:HG4_PB_assemblyticsfalcon_2642:HG4_Ill_Krunchall_15562:HG2_Ill_Krunchall_15298:HG3_PB_pbsv_10957:HG4_PB_pbsv_11240:HG2_PB_pbsv_11231:HG3_PB_HySA_16939:HG2_PB_HySA_20317:HG2_Ill_MetaSV_538:HG4_PB_SVrefine2PBcRDovetail_5654:HG4_Ill_svaba_14046:HG4_Ill_scalpel_10306:HG4_Ill_manta_2686:HG4_Ill_SVrefine2DISCOVARDovetail_8031:HG4_Ill_MetaSV_543:HG4_Ill_GATKHCSBGrefine_7747:HG4_CG_vcfBeta_7149:HG4_10X_allpass_2144:HG3_PB_SVrefine2Falcon1Dovetail_6767:HG3_Ill_svaba_14134:HG3_Ill_scalpel_10763:HG3_Ill_manta_2579:HG3_Ill_SVrefine2DISCOVARDovetail_8252:HG3_Ill_MetaSV_513:HG3_Ill_GATKHCSBGrefine_7472:HG3_10X_allpass_2225:HG2_PB_assemblyticsfalcon_2714:HG2_PB_SVrefine2PBcRplusDovetail_1181:HG2_PB_SVrefine2PB10Xhap12_8197:HG2_PB_SVrefine2Falcon2Bionano_5393:HG2_PB_SVrefine2Falcon1plusDovetail_1237:HG2_Ill_svaba_13976:HG2_Ill_scalpel_10603:HG2_Ill_manta_3166:HG2_Ill_SVrefine2DISCOVARplusDovetail_1380:HG2_Ill_GATKHCSBGrefine_7568:HG2_Ill_250bpfermikitraw_14980:HG2_Ill_150bpfermikitraw_14083:HG2_10X_allpass_1843;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7900:HG4_PB_SVrefine2PBcRDovetail_5654:HG4_Ill_svaba_14046:HG4_Ill_scalpel_10306:HG4_Ill_manta_2686:HG4_Ill_SVrefine2DISCOVARDovetail_8031:HG4_Ill_MetaSV_543:HG4_Ill_GATKHCSBGrefine_7747:HG4_CG_vcfBeta_7149:HG4_10X_allpass_2144:HG3_PB_SVrefine2Falcon1Dovetail_6767:HG3_Ill_svaba_14134:HG3_Ill_scalpel_10763:HG3_Ill_manta_2579:HG3_Ill_SVrefine2DISCOVARDovetail_8252:HG3_Ill_MetaSV_513:HG3_Ill_GATKHCSBGrefine_7472:HG3_10X_allpass_2225:HG2_PB_assemblyticsfalcon_2714:HG2_PB_SVrefine2PBcRplusDovetail_1181:HG2_PB_SVrefine2PB10Xhap12_8197:HG2_PB_SVrefine2Falcon2Bionano_5393:HG2_PB_SVrefine2Falcon1plusDovetail_1237:HG2_Ill_svaba_13976:HG2_Ill_scalpel_10603:HG2_Ill_manta_3166:HG2_Ill_SVrefine2DISCOVARplusDovetail_1380:HG2_Ill_GATKHCSBGrefine_7568:HG2_Ill_250bpfermikitraw_14980:HG2_Ill_150bpfermikitraw_14083:HG2_10X_allpass_1843;NumExactMatchSVs=31;ClusterMaxShiftDist=0.191419;ClusterMaxSizeDiff=0.191419;ClusterMaxEditDist=0.191419;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=1;PBexactcalls=7;Illexactcalls=19;TenXexactcalls=4;CGexactcalls=1;HG2count=19;HG3count=11;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-157;DistBack=75746;DistForward=38208;DistMin=38208;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=10:38271986-38272157;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=405.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:1/1:1:16:1:17:1/1:0:12:0:15:1/1:0:48:./.:.:.:.:.:.
chr10	44675233	HG2_Ill_scalpel_10649	TGGTTAGGGTGGGCCTCAATCTAATATGACTGGTGTCCTTATAAGAAGAAGAGATTAGGATACAAAGGGAAGACAATGTAAAGATATAGGGAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_11282:HG2_Ill_Krunchall_15379:HG2_Ill_Krunchall_15378:HG4_Ill_svaba_14122:HG4_Ill_scalpel_10363:HG4_Ill_manta_2692:HG4_Ill_SVrefine2DISCOVARDovetail_8052:HG4_Ill_Krunchall_15666:HG4_Ill_GATKHC_18115:HG4_Ill_GATKHCSBGrefine_7774:HG4_Ill_250bpfermikitraw_14940:HG4_Ill_150bpfermikitraw_14320:HG4_10X_allpass_2150:HG2_PB_pbsv_11263:HG2_PB_SVrefine2Falcon2Bionano_5398:HG2_Ill_svaba_14035:HG2_Ill_scalpel_10649:HG2_Ill_manta_3175:HG2_Ill_breakscan11_1630:HG2_Ill_SpiralSDKrefine_1751:HG2_Ill_SVrefine2DISCOVARplusDovetail_1400:HG2_Ill_Krunchall_15377:HG2_Ill_GATKHC_18074:HG2_Ill_GATKHCSBGrefine_7592:HG2_Ill_250bpfermikitraw_15054:HG2_Ill_150bpfermikitraw_14156:HG2_10X_allpass_1845:HG2_10X_SVrefine210Xhap12_7914;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7914:HG2_10X_allpass_1845:HG2_Ill_150bpfermikitraw_14156:HG2_Ill_250bpfermikitraw_15054:HG2_Ill_GATKHCSBGrefine_7592:HG2_Ill_GATKHC_18074:HG2_Ill_Krunchall_15377:HG2_Ill_SVrefine2DISCOVARplusDovetail_1400:HG2_Ill_SpiralSDKrefine_1751:HG2_Ill_breakscan11_1630:HG2_Ill_manta_3175:HG2_Ill_scalpel_10649:HG2_Ill_svaba_14035:HG2_PB_SVrefine2Falcon2Bionano_5398:HG2_PB_pbsv_11263:HG4_10X_allpass_2150:HG4_Ill_150bpfermikitraw_14320:HG4_Ill_250bpfermikitraw_14940:HG4_Ill_GATKHCSBGrefine_7774:HG4_Ill_GATKHC_18115:HG4_Ill_Krunchall_15666:HG4_Ill_SVrefine2DISCOVARDovetail_8052:HG4_Ill_manta_2692:HG4_Ill_scalpel_10363:HG4_Ill_svaba_14122;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0108696;ClusterMaxSizeDiff=0.0108108;ClusterMaxEditDist=0.0217391;PBcalls=3;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-92;DistBack=3517;DistForward=22431;DistMin=3517;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=10:44675234-44675334;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=406.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:28:0|1:40:1:1:25:0|1:37:1:0:27:0/1:33:19:./.:.:.:.:.:.
chr10	44901298	HG2_PB_pbsv_11264	TAAACATACATGGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7915:HG4_Ill_GATKHCSBGrefine_7775:HG3_Ill_GATKHCSBGrefine_7497:HG2_Ill_GATKHCSBGrefine_7593:HG4_Ill_Krunchall_15670:HG2_PB_SVrefine2PB10Xhap12_8211:HG2_PB_PB10Xdip_3824:HG2_PB_PB10Xdip_3823:HG2_Ill_manta_3176:HG4_Ill_MetaSV_557:HG3_Ill_MetaSV_520:HG3_PB_HySA_16979:HG3_Ill_Krunchall_15081:HG4_PB_assemblyticsfalcon_2669:HG3_PB_assemblyticsfalcon_2762:HG2_PB_assemblyticsfalcon_2771:HG2_PB_assemblyticsPBcR_2692:HG2_PB_HySA_20375:HG4_PB_pbsv_11283:HG4_PB_HySA_16405:HG2_Ill_tnscope_1265:HG4_PB_SVrefine2PBcRDovetail_5667:HG4_PB_SVrefine2Falcon1Dovetail_6829:HG4_Ill_SVrefine2DISCOVARDovetail_8055:HG4_Ill_MetaSV_556:HG3_PB_pbsv_10989:HG3_PB_SVrefine2PBcRDovetail_5256:HG3_PB_SVrefine2Falcon1Dovetail_6788:HG3_Ill_scalpel_10793:HG3_Ill_SVrefine2DISCOVARDovetail_8270:HG3_Ill_MetaSV_519:HG2_PB_pbsv_11264:HG2_PB_SVrefine2PBcRplusDovetail_1194:HG2_PB_SVrefine2PB10Xhap12_8210:HG2_PB_SVrefine2Falcon2Bionano_5399:HG2_PB_SVrefine2Falcon1plusDovetail_1255:HG2_Ill_SVrefine2DISCOVARplusDovetail_1402:HG2_Ill_MetaSV_547;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7915:HG4_PB_SVrefine2PBcRDovetail_5667:HG4_PB_SVrefine2Falcon1Dovetail_6829:HG4_Ill_SVrefine2DISCOVARDovetail_8055:HG4_Ill_MetaSV_556:HG3_PB_pbsv_10989:HG3_PB_SVrefine2PBcRDovetail_5256:HG3_PB_SVrefine2Falcon1Dovetail_6788:HG3_Ill_scalpel_10793:HG3_Ill_SVrefine2DISCOVARDovetail_8270:HG3_Ill_MetaSV_519:HG2_PB_pbsv_11264:HG2_PB_SVrefine2PBcRplusDovetail_1194:HG2_PB_SVrefine2PB10Xhap12_8210:HG2_PB_SVrefine2Falcon2Bionano_5399:HG2_PB_SVrefine2Falcon1plusDovetail_1255:HG2_Ill_SVrefine2DISCOVARplusDovetail_1402:HG2_Ill_MetaSV_547;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0754098;ClusterMaxSizeDiff=0.0754098;ClusterMaxEditDist=0.0754098;PBcalls=21;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-308;DistBack=1364;DistForward=-295;DistMin=-295;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=10:44901299-44901617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=407.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:26:1:27:./.:0:4:0:11:1/1:0:48:1/1:2:23:.:.:0.931065
chr10	44909978	HG2_Ill_250bpfermikitraw_15058	CATGCTGAGCAGTTTCTTTTTCAGAGACATAGATACCATCCAAAAATTTCCTGAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7916:HG4_PB_assemblyticsfalcon_2670:HG2_PB_pbsv_11265:HG3_PB_pbsv_10990:HG4_PB_pbsv_11284:HG4_PB_HySA_16406:HG4_PB_SVrefine2PBcRDovetail_5668:HG4_Ill_svaba_14123:HG4_Ill_manta_2693:HG4_Ill_SVrefine2DISCOVARDovetail_8056:HG4_Ill_Krunchall_15671:HG4_Ill_GATKHCSBGrefine_7776:HG4_Ill_250bpfermikitraw_14941:HG4_Ill_150bpfermikitraw_14321:HG3_PB_assemblyticsfalcon_2763:HG3_PB_SVrefine2PBcRDovetail_5257:HG3_Ill_svaba_14192:HG3_Ill_manta_2582:HG3_Ill_SVrefine2DISCOVARDovetail_8271:HG3_Ill_Krunchall_15082:HG3_Ill_GATKHCSBGrefine_7498:HG3_Ill_250bpfermikitraw_14644:HG3_Ill_150bpfermikitraw_14181:HG2_Ill_svaba_14036:HG2_Ill_SpiralSDKrefine_1753:HG2_Ill_GATKHCSBGrefine_7594:HG2_Ill_250bpfermikitraw_15058:HG2_Ill_150bpfermikitraw_14158;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7916:HG4_PB_SVrefine2PBcRDovetail_5668:HG4_Ill_svaba_14123:HG4_Ill_manta_2693:HG4_Ill_SVrefine2DISCOVARDovetail_8056:HG4_Ill_Krunchall_15671:HG4_Ill_GATKHCSBGrefine_7776:HG4_Ill_250bpfermikitraw_14941:HG4_Ill_150bpfermikitraw_14321:HG3_PB_assemblyticsfalcon_2763:HG3_PB_SVrefine2PBcRDovetail_5257:HG3_Ill_svaba_14192:HG3_Ill_manta_2582:HG3_Ill_SVrefine2DISCOVARDovetail_8271:HG3_Ill_Krunchall_15082:HG3_Ill_GATKHCSBGrefine_7498:HG3_Ill_250bpfermikitraw_14644:HG3_Ill_150bpfermikitraw_14181:HG2_Ill_svaba_14036:HG2_Ill_SpiralSDKrefine_1753:HG2_Ill_GATKHCSBGrefine_7594:HG2_Ill_250bpfermikitraw_15058:HG2_Ill_150bpfermikitraw_14158;NumExactMatchSVs=23;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.178218;PBcalls=8;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=1080;DistForward=31735;DistMin=1080;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=59;REFWIDENED=10:44909979-44910091;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=408.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:39:0|1:29:0:3:39:1|0:0:18:24:1:0/1:41:16:./.:.:.:.:.:.
chr10	45098163	HG2_Ill_250bpfermikitraw_15060	TATATATATCCACATATATATCCACATATATATGTGAATATATATATCCAC	T	10	PASS	ClusterIDs=HG2_Ill_manta_3177:HG4_Ill_svaba_14125:HG4_Ill_scalpel_10366:HG4_Ill_Krunchall_15673:HG4_Ill_250bpfermikitraw_14943:HG4_Ill_150bpfermikitraw_14323:HG2_Ill_svaba_14038:HG2_Ill_scalpel_10654:HG2_Ill_Krunchall_15384:HG2_Ill_250bpfermikitraw_15060:HG2_Ill_150bpfermikitraw_14160:HG4_Ill_manta_2694;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14160:HG2_Ill_250bpfermikitraw_15060:HG2_Ill_Krunchall_15384:HG2_Ill_scalpel_10654:HG2_Ill_svaba_14038:HG4_Ill_150bpfermikitraw_14323:HG4_Ill_250bpfermikitraw_14943:HG4_Ill_Krunchall_15673:HG4_Ill_scalpel_10366:HG4_Ill_svaba_14125;NumExactMatchSVs=10;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0192308;PBcalls=0;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=1;NumTechsExact=1;SVLEN=-50;DistBack=1;DistForward=59887;DistMin=1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=10:45098162-45098260;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:17:0|1:34:1:1:16:./.:14:3:1:18:0/1:19:27:./.:.:.:.:.:.
chr10	47083158	HG4_Ill_Krunchall_15679	GAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_11292:HG4_Ill_manta_2698:HG2_Ill_manta_3181:HG4_Ill_GATKHC_18129:HG4_Ill_GATKHCSBGrefine_7782:HG4_10X_allpass_2152:HG3_Ill_GATKHC_17996:HG3_Ill_GATKHCSBGrefine_7502:HG3_10X_allpass_2229:HG2_Ill_GATKHC_18090:HG2_Ill_GATKHCSBGrefine_7598:HG4_PB_assemblyticsfalcon_2676:HG3_PB_assemblyticsfalcon_2769:HG2_PB_assemblyticsfalcon_2779:HG4_Ill_svaba_14129:HG4_Ill_Krunchall_15679:HG4_Ill_250bpfermikitraw_14947:HG4_Ill_150bpfermikitraw_14326:HG3_Ill_svaba_14198:HG3_Ill_Krunchall_15091:HG3_Ill_250bpfermikitraw_14653:HG3_Ill_150bpfermikitraw_14190:HG2_Ill_svaba_14043:HG2_Ill_SpiralSDKrefine_1760:HG2_Ill_Krunchall_15389;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_Krunchall_15389:HG2_Ill_SpiralSDKrefine_1760:HG2_Ill_svaba_14043:HG3_Ill_150bpfermikitraw_14190:HG3_Ill_250bpfermikitraw_14653:HG3_Ill_Krunchall_15091:HG3_Ill_svaba_14198:HG4_Ill_150bpfermikitraw_14326:HG4_Ill_250bpfermikitraw_14947:HG4_Ill_Krunchall_15679:HG4_Ill_svaba_14129;NumExactMatchSVs=11;ClusterMaxShiftDist=0.259259;ClusterMaxSizeDiff=0.259259;ClusterMaxEditDist=0.259259;PBcalls=4;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-60;DistBack=-6;DistForward=9;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=10:47083151-47083241;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=410.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:64:65:1|0:3:52:58:5:./.:40:4:0:27:0/1:60:32:./.:.:.:.:.:.
chr10	47088375	HG2_PB_SVrefine2PBcRplusDovetail_1202	TAAAGAATTCTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_549:HG4_10X_allpass_2153:HG2_10X_allpass_1846:HG3_Ill_Krunchall_15092:HG2_PB_pbsv_11273:HG2_Ill_Krunchall_15390:HG3_PB_assemblyticsfalcon_2770:HG2_PB_assemblyticsPBcR_2702:HG2_PB_PB10Xdip_4370:HG2_Ill_tnscope_1266:HG4_PB_pbsv_11293:HG4_PB_SVrefine2Falcon1Dovetail_6836:HG4_Ill_manta_2699:HG4_Ill_MetaSV_561:HG4_Ill_GATKHCSBGrefine_7783:HG3_PB_pbsv_10995:HG3_PB_SVrefine2Falcon1Dovetail_6794:HG3_Ill_manta_2585:HG3_Ill_MetaSV_521:HG3_Ill_GATKHCSBGrefine_7503:HG3_10X_allpass_2230:HG2_PB_SVrefine2PBcRplusDovetail_1202:HG2_PB_SVrefine2PB10Xhap12_8218:HG2_PB_SVrefine2Falcon1plusDovetail_1262:HG2_Ill_manta_3182:HG2_Ill_breakscan11_1631:HG2_Ill_GATKHCSBGrefine_7600:HG2_10X_SVrefine210Xhap12_7919;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7919:HG2_Ill_GATKHCSBGrefine_7600:HG2_Ill_breakscan11_1631:HG2_Ill_manta_3182:HG2_PB_SVrefine2Falcon1plusDovetail_1262:HG2_PB_SVrefine2PB10Xhap12_8218:HG2_PB_SVrefine2PBcRplusDovetail_1202:HG3_10X_allpass_2230:HG3_Ill_GATKHCSBGrefine_7503:HG3_Ill_MetaSV_521:HG3_Ill_manta_2585:HG3_PB_SVrefine2Falcon1Dovetail_6794:HG3_PB_pbsv_10995:HG4_Ill_GATKHCSBGrefine_7783:HG4_Ill_MetaSV_561:HG4_Ill_manta_2699:HG4_PB_SVrefine2Falcon1Dovetail_6836:HG4_PB_pbsv_11293;NumExactMatchSVs=18;ClusterMaxShiftDist=0.124814;ClusterMaxSizeDiff=0.124814;ClusterMaxEditDist=0.124814;PBcalls=11;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=5146;DistForward=-319;DistMin=-319;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=10:47088376-47088713;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=411.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:62:82:0|1:56:0:2:90:1|0:0:42:47:0:0/1:41:67:0/1:44:18:.:.:.
chr10	49917156	HG2_PB_SVrefine2PB10Xhap12_8227	TAAGAGCACACATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_15695:HG4_Ill_Krunchall_15696:HG3_PB_pbsv_11009:HG3_Ill_Krunchall_15107:HG2_Ill_Krunchall_15404:HG4_PB_assemblyticsfalcon_2691:HG3_PB_assemblyticsfalcon_2787:HG2_PB_assemblyticsfalcon_2793:HG2_PB_assemblyticsPBcR_2715:HG2_PB_HySA_20410:HG4_PB_pbsv_11305:HG2_PB_pbsv_11284:HG4_Ill_MetaSV_563:HG3_Ill_MetaSV_522:HG2_Ill_tnscope_1268:HG2_Ill_MetaSV_552:HG4_PB_SVrefine2PBcRDovetail_5678:HG4_PB_SVrefine2Falcon1Dovetail_6842:HG4_Ill_scalpel_10375:HG4_Ill_manta_2700:HG4_Ill_SVrefine2DISCOVARDovetail_8068:HG4_Ill_GATKHCSBGrefine_7789:HG4_10X_allpass_2156:HG3_PB_SVrefine2PBcRDovetail_5266:HG3_PB_SVrefine2Falcon1Dovetail_6800:HG3_Ill_scalpel_10807:HG3_Ill_manta_2587:HG3_Ill_SVrefine2DISCOVARDovetail_8273:HG3_Ill_GATKHCSBGrefine_7512:HG3_10X_allpass_2233:HG2_PB_SVrefine2PBcRplusDovetail_1208:HG2_PB_SVrefine2PB10Xhap12_8227:HG2_PB_SVrefine2Falcon2Bionano_5406:HG2_PB_SVrefine2Falcon1plusDovetail_1269:HG2_Ill_scalpel_10666:HG2_Ill_manta_3184:HG2_Ill_SVrefine2DISCOVARplusDovetail_1421:HG2_Ill_GATKHCSBGrefine_7607:HG2_10X_allpass_1847:HG2_10X_SVrefine210Xhap12_7922:HG2_Ill_breakscan11_1634;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7922:HG2_10X_allpass_1847:HG2_Ill_GATKHCSBGrefine_7607:HG2_Ill_SVrefine2DISCOVARplusDovetail_1421:HG2_Ill_manta_3184:HG2_Ill_scalpel_10666:HG2_PB_SVrefine2Falcon1plusDovetail_1269:HG2_PB_SVrefine2Falcon2Bionano_5406:HG2_PB_SVrefine2PB10Xhap12_8227:HG2_PB_SVrefine2PBcRplusDovetail_1208:HG3_10X_allpass_2233:HG3_Ill_GATKHCSBGrefine_7512:HG3_Ill_SVrefine2DISCOVARDovetail_8273:HG3_Ill_manta_2587:HG3_Ill_scalpel_10807:HG3_PB_SVrefine2Falcon1Dovetail_6800:HG3_PB_SVrefine2PBcRDovetail_5266:HG4_10X_allpass_2156:HG4_Ill_GATKHCSBGrefine_7789:HG4_Ill_SVrefine2DISCOVARDovetail_8068:HG4_Ill_manta_2700:HG4_Ill_scalpel_10375:HG4_PB_SVrefine2Falcon1Dovetail_6842:HG4_PB_SVrefine2PBcRDovetail_5678;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0914826;ClusterMaxSizeDiff=0.0914826;ClusterMaxEditDist=0.205371;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-829;DistForward=75095;DistMin=-829;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=10:49917157-49917494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:1:23:1:30:1/1:0:29:0:29:1/1:0:43:./.:1:12:.:.:.
chr10	50335218	HG2_Ill_Krunchall_15406	TGCGTATATTGAACCAGCCTAGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_11286:HG4_PB_pbsv_11308:HG2_PB_HySA_20413:HG4_Ill_svaba_14142:HG4_Ill_manta_2701:HG4_Ill_Krunchall_15699:HG4_Ill_GATKHC_18149:HG4_Ill_GATKHCSBGrefine_7792:HG4_Ill_250bpfermikitraw_14965:HG4_Ill_150bpfermikitraw_14341:HG4_10X_allpass_2158:HG2_Ill_svaba_14055:HG2_Ill_manta_3185:HG2_Ill_Krunchall_15406:HG2_Ill_GATKHC_18110:HG2_Ill_GATKHCSBGrefine_7608:HG2_Ill_250bpfermikitraw_15079:HG2_10X_SVrefine210Xhap12_7924;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7924:HG2_Ill_250bpfermikitraw_15079:HG2_Ill_GATKHCSBGrefine_7608:HG2_Ill_GATKHC_18110:HG2_Ill_Krunchall_15406:HG2_Ill_manta_3185:HG2_Ill_svaba_14055:HG4_10X_allpass_2158:HG4_Ill_150bpfermikitraw_14341:HG4_Ill_250bpfermikitraw_14965:HG4_Ill_GATKHCSBGrefine_7792:HG4_Ill_GATKHC_18149:HG4_Ill_Krunchall_15699:HG4_Ill_manta_2701:HG4_Ill_svaba_14142;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0677966;PBcalls=3;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-59;DistBack=48597;DistForward=32470;DistMin=32470;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=10:50335219-50335279;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=413.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:17:./.:0:0:0:0:0|1:11:0:0:5:0/1:41:23:./.:.:.:.:.:.
chr10	50543427	HG2_PB_SVrefine2PB10Xhap12_8228	CAGCCTTCTCTTGTCCACTCCCTGTGGGTCCTGACCTACAGCCTTCTCTTGACTACTTCCTGTGGGTCCTGACCTACAGCCTTCTCTTGTCTGCTTCCGGTGGGTCCTGACCTGCAGCCTCCTCTTGTCTACTTCCTGTGGGTCCTGACCTACAACCTTCTCTTGACTACTTCCTGTGGGTCCTGACCTACAACATTCTCTTGACTACTTCCTGTGGGTCCTGACCTGCATAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7925:HG4_Ill_Krunchall_15705:HG4_PB_pbsv_11309:HG2_PB_pbsv_11287:HG4_Ill_GATKHCSBGrefine_7793:HG4_10X_allpass_2159:HG2_Ill_manta_3186:HG2_Ill_SpiralSDKrefine_1782:HG2_Ill_GATKHCSBGrefine_7609:HG2_10X_allpass_1848:HG4_PB_SVrefine2PBcRDovetail_5680:HG4_Ill_SVrefine2DISCOVARDovetail_8070:HG3_PB_SVrefine2Falcon1Dovetail_6802:HG2_PB_SVrefine2PBcRplusDovetail_1209:HG2_PB_SVrefine2PB10Xhap12_8228:HG2_PB_SVrefine2Falcon2Bionano_5407;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7925:HG4_PB_SVrefine2PBcRDovetail_5680:HG4_Ill_SVrefine2DISCOVARDovetail_8070:HG3_PB_SVrefine2Falcon1Dovetail_6802:HG2_PB_SVrefine2PBcRplusDovetail_1209:HG2_PB_SVrefine2PB10Xhap12_8228:HG2_PB_SVrefine2Falcon2Bionano_5407;NumExactMatchSVs=7;ClusterMaxShiftDist=0.017094;ClusterMaxSizeDiff=0.0170213;ClusterMaxEditDist=0.0597015;PBcalls=7;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-232;DistBack=15659;DistForward=-151;DistMin=-151;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=240;REFWIDENED=10:50543428-50543899;PctSeqSimilarity=0.9432;PctSizeSimilarity=0.9831;PctRecOverlap=0.8354;SizeDiff=-4;StartDistance=-35;EndDistance=-39;GTMatch=0;TruScore=92;MatchId=414.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:./.:14:6:11:12:./.:35:1:3:7:./.:33:2:./.:.:.:.:.:.
chr10	52716800	HG2_Ill_GATKHC_18131	CACACACACATACATGTGTGTGTATATATATACACACACACATACATGTGTGTATATATAT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_11016:HG2_Ill_SpiralSDKrefine_1799:HG4_PB_assemblyticsfalcon_2709:HG3_PB_assemblyticsfalcon_2804:HG2_PB_HySA_20432:HG2_PB_assemblyticsfalcon_2810:HG4_Ill_svaba_14152:HG4_Ill_GATKHC_18171:HG4_Ill_GATKHCSBGrefine_7798:HG4_Ill_250bpfermikitraw_14986:HG4_Ill_150bpfermikitraw_14359:HG3_Ill_svaba_14225:HG3_Ill_Krunchall_15130:HG3_Ill_GATKHC_18041:HG3_Ill_GATKHCSBGrefine_7517:HG3_Ill_250bpfermikitraw_14688:HG3_Ill_150bpfermikitraw_14226:HG2_PB_pbsv_11294:HG2_PB_assemblyticsPBcR_2737:HG2_Ill_svaba_14065:HG2_Ill_Krunchall_15425:HG2_Ill_GATKHC_18131:HG2_Ill_GATKHCSBGrefine_7613:HG2_Ill_250bpfermikitraw_15097:HG2_Ill_150bpfermikitraw_14196:HG4_PB_pbsv_11317;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14196:HG2_Ill_250bpfermikitraw_15097:HG2_Ill_GATKHCSBGrefine_7613:HG2_Ill_GATKHC_18131:HG2_Ill_Krunchall_15425:HG2_Ill_svaba_14065:HG2_PB_assemblyticsPBcR_2737:HG2_PB_pbsv_11294:HG3_Ill_150bpfermikitraw_14226:HG3_Ill_250bpfermikitraw_14688:HG3_Ill_GATKHCSBGrefine_7517:HG3_Ill_GATKHC_18041:HG3_Ill_Krunchall_15130:HG3_Ill_svaba_14225:HG4_Ill_150bpfermikitraw_14359:HG4_Ill_250bpfermikitraw_14986:HG4_Ill_GATKHCSBGrefine_7798:HG4_Ill_GATKHC_18171:HG4_Ill_svaba_14152;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0806452;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.251969;PBcalls=8;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=-12;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=10:52716799-52716881;PctSeqSimilarity=0.9634;PctSizeSimilarity=0.9375;PctRecOverlap=0.4769;SizeDiff=-4;StartDistance=-30;EndDistance=-34;GTMatch=0;TruScore=79;MatchId=415.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:65:1/1:2:19:1:20:./.:2:14:4:5:1/1:0:42:./.:.:.:.:.:.
chr10	54015613	HG4_Ill_SVrefine2DISCOVARDovetail_8085	TAAATATTATTTCTTTAATAAAATAACCTTTCATTTGAACCCTACTTTATAATCTTCAAATTACTTTCATGTTCATTGTATAATTTTGCCCTTATAGCTACTCTGTGAGGAGAACATGAGACATGATCCACATTTTACAGGAAAGAAGACAAGAATAATGTATTTATGTGGTTTAAGGCCACTTAGTCATTGAAAGAGCTGTTGTTATTGCCCAGAATTACTGATTTTTTAACTAGAAGCTTTTTCTGCCATTCTGGGTTTTAAAAATATTTGGATTCTTACCACCACCATCAACAACCACCCCCAAATCAAACAAGTGTTACTTCATTGTTATATGTACACCTTTGCTTTAAAAAAATTCTTCTGGAATTCAAGAACCTGAATTAGAACTAAATCTAGAATAGATGTAGTAATTGTCTGCTGTGTGCCTCTCTTTTTGTTATATCCTCAGAGGCTCCCCTTTCTCTAAATCCTTTTCTGCTCCTAGTTTAATGGCAAAATACCTGCAGAGAAAAAAAATCCGACAGTGTAACATGGTAGCTAGAAGCTAGAGCTCTAGAATTAGGCTTTCTGGATTCAGATATTACCCATTGTGTATGCTTAGTCATTTACTTAAAACTTTCTGAGCCTTGCTTTTCTTGTCTCTGAAATGATGATAATAATAGGATATGTACCTCACAAGGTTGTGAAGATTAAACGAGTTAAAGCCCTCAAAATAGTGTCTCACACATCATAGGTCAGTAAATGGTGTTAATGTTGTTATTGTTGCTATTATTATTAAAGCATGCTAATGATAGTTCTTTTTATTTATCACTTCCAGCTATAAGCATAGAAAAGGAAGGGAATGAAAGTATTTTACTCTTTTCTTTTCCATTGCTAGGCCAAGGCCTGAGAGTGCAACCATTATTCCAATATAAGTAAGAGCCAGAGGTCTTCAAATGACCTTCAGTGATAACCTCTATTAAATTTCTCCAGACCACTAAGCTCTTAACTTTCTGATCTGTCATGAGAGGAGATGGGAAACAATTTTCAATATCCCTTATGCTGAACCTGTGTGCCCCTGAAGTAGCCTGCTTTTATTCATCCATTTCACTTCTAAATTGTGAAGCCCCACCTCTTAACCTCTCAATGGGAAATCATTTTCAGTGCAAACTGCTGAATCATACCTAGTTCCTCTCCAGCCTTCTTAACCCATGGCACCTCAGTTGGGCATAATAAAGACCTGGCTCTTGGCAAGTTGAATACAAAAGTTACCTCTCATTCCTTCTCTGCTGCAGTTCAGTTTCTAAACCACATAACTGGATTGCCCAGGAAAAGAAAATGTGGTAGTCGCGAGAACCAATTTATGCTAAGACAAGGAGGTGTATTTCACAGGGTGTGTCTGTTCATGACATCCATACCACTCTCACAGCATTTTTGCCAGCTGCCTTGGCACTATAAAAACAAGCAAGCAGGCTTGGAGTGCTATGTAAACCAATTGAAAAAAAAATAGAAACTAAGAGGTGATTAAGCAAGAAGTTAGGTGATAAACCCATTGCTCAGTCAGCAGGGTCTTATTGCGAAAGGTGAGCAACTTAACTCCAAAGGGAAACCCCATGTAAGATGAAAACATTTCAAGAGCTTCCTACTGCCAAGCCGCACAGCAATGAAACAGAATAGCTATGGAGATCTTTGGGCAGTATTGCCATGTGTACCCACGGTGATTTATGCTACATCGGACACCTGGGGAAACCCTGCTGCCCTAAGGCCTTGCATCCTCTGTGACTAAAGTGAGTAAGGACTCAATACTGGTTGAAACTGAAAGTTTGCTTCATTTTAACACAGCCTCTTCTTTAGTAGTACTCTGTGGTTTATTATTAAATATGTAATTCTCATGTTATGTTTATTCTTCAAAAGAATAAAAACGGACAAAAATTATTAACTCTAATAAATAGCACTCATTTCTCAGAAAATAAGTTCTTCAGAGAACTAATGAAAATCCCATCTAATAAACACTAATTGAGCATCAGTAGGTGTAGTAACAATATACTGCAACTGCTAAAATAACCACATGACAGTTTCAATGCAGAAATTACAAGTAGTAAAGCTTATCTCTACTTTGGTATATGCAAATAAAGTAAGATAAGCATTACTTCATCTCATTATTGTAGAATAAATTTCTTTTGTACATTGATAATTATAATAAAATTTAGATTACATGAATGAAAACAAATATGTTACTTTCTAACCCATCTTGTGAAATTACAGAAATTTTATATATTAGCAATCAATTGAAATGCCTATTTTTTCTTACAAGTAGTTGAAGTTAGTATCCTACCACAAGATAAAATGTTAATAGTTTCTCCTCTAAACCTGCATATGATTTTAGAATAATCACTATAAATCTAGAATGCACTGGGCATGTCTTTCCAAAGCTTAAAATAATTGGTGATAAAACAGCTCTTACAAAAGTTGACATTTAGGTCATACTTGCCTTTTTTGTTTTCTATGACATAAATATTATTTCTTTAATCCAAG	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_567:HG4_PB_pbsv_11321:HG2_PB_assemblyticsfalcon_2819:HG3_PB_assemblyticsfalcon_2811:HG4_PB_assemblyticsfalcon_2718:HG2_PB_pbsv_11300:HG4_10X_allpass_2160:HG2_Ill_MetaSV_556:HG4_PB_SVrefine2PBcRDovetail_5689:HG4_PB_SVrefine2Falcon1Dovetail_6851:HG4_Ill_SVrefine2DISCOVARDovetail_8085:HG3_PB_SVrefine2Falcon1Dovetail_6807:HG2_PB_SVrefine2PBcRplusDovetail_1217:HG2_PB_SVrefine2Falcon1plusDovetail_1274;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1274:HG2_PB_SVrefine2PBcRplusDovetail_1217:HG3_PB_SVrefine2Falcon1Dovetail_6807:HG4_Ill_SVrefine2DISCOVARDovetail_8085:HG4_PB_SVrefine2Falcon1Dovetail_6851:HG4_PB_SVrefine2PBcRDovetail_5689;NumExactMatchSVs=6;ClusterMaxShiftDist=0.230927;ClusterMaxSizeDiff=0.230927;ClusterMaxEditDist=0.230927;PBcalls=10;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-2516;DistBack=11069;DistForward=43910;DistMin=11069;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=241;REFWIDENED=10:54015614-54018370;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:62:./.:26:10:10:10:0|1:44:0:0:8:0/1:37:10:0/1:173:84:2547:.:.
chr10	54363890	HG2_PB_SVrefine2PBcRplusDovetail_1218	TCTCTGCATTTAGCTGAAAGCATGGTTGTCCAGAATTAAGGCTATTTCTCAGTCTCTCTTAACAGCTGGCAATGGTCATGTAC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_784:HG3_PB_assemblyticsfalcon_2813:HG3_PB_pbsv_11024:HG4_PB_HySA_16464:HG2_PB_pbsv_11302:HG4_PB_pbsv_11322:HG4_PB_SVrefine2Falcon1Dovetail_6852:HG4_Ill_SVrefine2DISCOVARDovetail_8086:HG4_Ill_GATKHCSBGrefine_7804:HG4_Ill_250bpfermikitraw_15003:HG3_PB_HySA_17054:HG3_Ill_manta_2592:HG3_Ill_GATKHCSBGrefine_7525:HG3_Ill_250bpfermikitraw_14705:HG2_PB_SVrefine2PBcRplusDovetail_1218:HG2_Ill_manta_3189:HG2_Ill_SpiralSDKrefine_1810:HG2_Ill_GATKHCSBGrefine_7620:HG2_Ill_250bpfermikitraw_15113:HG2_10X_SVrefine210Xhap12_7935:HG4_Ill_Spiral_919;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7935:HG2_Ill_250bpfermikitraw_15113:HG2_Ill_GATKHCSBGrefine_7620:HG2_Ill_SpiralSDKrefine_1810:HG2_Ill_manta_3189:HG2_PB_SVrefine2PBcRplusDovetail_1218:HG3_Ill_250bpfermikitraw_14705:HG3_Ill_GATKHCSBGrefine_7525:HG3_Ill_manta_2592:HG3_PB_HySA_17054:HG4_Ill_250bpfermikitraw_15003:HG4_Ill_GATKHCSBGrefine_7804:HG4_Ill_SVrefine2DISCOVARDovetail_8086:HG4_PB_SVrefine2Falcon1Dovetail_6852;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0493827;PBcalls=8;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-82;DistBack=3002;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=81;REFWIDENED=10:54363891-54364053;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=417.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:32:0|1:41:5:3:30:./.:13:0:0:5:0/1:20:19:./.:.:.:.:.:.
chr10	54441196	HG3_10X_allpass_2236	ACTCAACTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1636:HG4_PB_assemblyticsfalcon_2724:HG2_PB_assemblyticsfalcon_2821:HG2_PB_assemblyticsPBcR_2750:HG4_Ill_Krunchall_15735:HG3_Ill_Krunchall_15145:HG3_PB_HySA_17056:HG3_Ill_Spiral_11800:HG4_PB_pbsv_11323:HG4_PB_HySA_16465:HG4_Ill_MetaSV_568:HG3_Ill_MetaSV_529:HG2_Ill_tnscope_1269:HG2_Ill_MetaSV_557:HG4_PB_SVrefine2Falcon1Dovetail_6854:HG4_Ill_svaba_14169:HG4_Ill_manta_2705:HG4_Ill_SVrefine2DISCOVARDovetail_8087:HG4_Ill_GATKHCSBGrefine_7805:HG4_10X_allpass_2161:HG3_PB_pbsv_11026:HG3_PB_assemblyticsfalcon_2815:HG3_PB_SVrefine2PBcRDovetail_5277:HG3_PB_SVrefine2Falcon1Dovetail_6809:HG3_Ill_svaba_14243:HG3_Ill_scalpel_10838:HG3_Ill_manta_2593:HG3_Ill_SVrefine2DISCOVARDovetail_8297:HG3_Ill_GATKHCSBGrefine_7527:HG3_10X_allpass_2236:HG2_PB_pbsv_11303:HG2_PB_SVrefine2PBcRplusDovetail_1219:HG2_PB_SVrefine2PB10Xhap12_8237:HG2_PB_SVrefine2Falcon2Bionano_5418:HG2_PB_SVrefine2Falcon1plusDovetail_1275:HG2_Ill_svaba_14079:HG2_Ill_manta_3190:HG2_Ill_SVrefine2DISCOVARplusDovetail_1444:HG2_Ill_GATKHCSBGrefine_7621:HG2_10X_allpass_1850:HG2_10X_SVrefine210Xhap12_7936;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7936:HG2_10X_allpass_1850:HG2_Ill_GATKHCSBGrefine_7621:HG2_Ill_SVrefine2DISCOVARplusDovetail_1444:HG2_Ill_manta_3190:HG2_Ill_svaba_14079:HG2_PB_SVrefine2Falcon1plusDovetail_1275:HG2_PB_SVrefine2Falcon2Bionano_5418:HG2_PB_SVrefine2PB10Xhap12_8237:HG2_PB_SVrefine2PBcRplusDovetail_1219:HG2_PB_pbsv_11303:HG3_10X_allpass_2236:HG3_Ill_GATKHCSBGrefine_7527:HG3_Ill_SVrefine2DISCOVARDovetail_8297:HG3_Ill_manta_2593:HG3_Ill_scalpel_10838:HG3_Ill_svaba_14243:HG3_PB_SVrefine2Falcon1Dovetail_6809:HG3_PB_SVrefine2PBcRDovetail_5277:HG3_PB_assemblyticsfalcon_2815:HG3_PB_pbsv_11026:HG4_10X_allpass_2161:HG4_Ill_GATKHCSBGrefine_7805:HG4_Ill_SVrefine2DISCOVARDovetail_8087:HG4_Ill_manta_2705:HG4_Ill_svaba_14169:HG4_PB_SVrefine2Falcon1Dovetail_6854;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0801282;ClusterMaxSizeDiff=0.0801282;ClusterMaxEditDist=0.0801282;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=11983;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=10:54441197-54441526;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=418.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:1/1:0:17:0:17:1/1:0:12:0:20:1/1:1:40:0/1:3:14:.:.:.
chr10	54860810	HG4_Ill_GATKHCSBGrefine_7809	ACCCGATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1637:HG4_Ill_Krunchall_15736:HG3_Ill_Krunchall_15149:HG2_Ill_Krunchall_15442:HG4_PB_assemblyticsfalcon_2729:HG2_PB_assemblyticsfalcon_2826:HG2_PB_HySA_20447:HG2_PB_assemblyticsPBcR_2755:HG3_PB_SVrefine2PBcRDovetail_5282:HG3_Ill_Krunchall_15148:HG2_Ill_Krunchall_15441:HG3_PB_pbsv_11031:HG4_Ill_MetaSV_571:HG2_Ill_tnscope_1270:HG2_Ill_MetaSV_561:HG4_PB_pbsv_11325:HG4_PB_SVrefine2Falcon1Dovetail_6859:HG4_PB_HySA_16467:HG4_Ill_scalpel_10394:HG4_Ill_manta_2706:HG4_Ill_SVrefine2DISCOVARDovetail_8089:HG4_Ill_GATKHCSBGrefine_7809:HG4_10X_allpass_2162:HG3_PB_assemblyticsfalcon_2821:HG3_PB_SVrefine2Falcon1Dovetail_6814:HG3_Ill_scalpel_10839:HG3_Ill_manta_2595:HG3_Ill_SVrefine2DISCOVARDovetail_8301:HG3_Ill_MetaSV_534:HG3_Ill_GATKHCSBGrefine_7533:HG3_10X_allpass_2237:HG2_PB_pbsv_11308:HG2_PB_SVrefine2PBcRplusDovetail_1224:HG2_PB_SVrefine2PB10Xhap12_8242:HG2_PB_SVrefine2Falcon2Bionano_5422:HG2_PB_SVrefine2Falcon1plusDovetail_1280:HG2_Ill_scalpel_10686:HG2_Ill_manta_3191:HG2_Ill_SVrefine2DISCOVARplusDovetail_1446:HG2_Ill_GATKHCSBGrefine_7623:HG2_10X_allpass_1851:HG2_10X_SVrefine210Xhap12_7939;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7939:HG2_10X_allpass_1851:HG2_Ill_GATKHCSBGrefine_7623:HG2_Ill_SVrefine2DISCOVARplusDovetail_1446:HG2_Ill_manta_3191:HG2_Ill_scalpel_10686:HG2_PB_SVrefine2Falcon1plusDovetail_1280:HG2_PB_SVrefine2Falcon2Bionano_5422:HG2_PB_SVrefine2PB10Xhap12_8242:HG2_PB_SVrefine2PBcRplusDovetail_1224:HG2_PB_pbsv_11308:HG3_10X_allpass_2237:HG3_Ill_GATKHCSBGrefine_7533:HG3_Ill_MetaSV_534:HG3_Ill_SVrefine2DISCOVARDovetail_8301:HG3_Ill_manta_2595:HG3_Ill_scalpel_10839:HG3_PB_SVrefine2Falcon1Dovetail_6814:HG3_PB_assemblyticsfalcon_2821:HG4_10X_allpass_2162:HG4_Ill_GATKHCSBGrefine_7809:HG4_Ill_SVrefine2DISCOVARDovetail_8089:HG4_Ill_manta_2706:HG4_Ill_scalpel_10394:HG4_PB_HySA_16467:HG4_PB_SVrefine2Falcon1Dovetail_6859:HG4_PB_pbsv_11325;NumExactMatchSVs=27;ClusterMaxShiftDist=0.107765;ClusterMaxSizeDiff=0.107765;ClusterMaxEditDist=0.107765;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=23962;DistForward=17201;DistMin=17201;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=10:54860811-54861139;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=419.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:1:27:0:15:1/1:0:26:0:22:1/1:0:45:0/1:2:13:.:.:.
chr10	55086500	HG3_10X_allpass_2238	GAAAGATGGAGAAATAAGAATATATGGGCAATTAAGTCTAATCTGATCACAACTGCTCATGTGTACAGTGATGCTAACTCCTGATTATTTTTTTCTATTTTACTCAGCAAGGAAGTAGAAAATGAAACTCGAATTGAGACCAACCTCTTACTCGGTTGAATGCTAGGAAAGAAAACTACCAAATCATTAAATAGTGTGGTATGAGCACAGTATTTGGGTAAATTGGGT	G	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_2732:HG2_PB_pbsv_11309:HG3_PB_pbsv_11032:HG3_PB_SVrefine2PBcRDovetail_5283:HG3_PB_SVrefine2Falcon1Dovetail_6815:HG3_10X_allpass_2238:HG2_PB_SVrefine2PB10Xhap12_8243:HG2_PB_SVrefine2Falcon2Bionano_5423:HG2_10X_allpass_1852;NumClusterSVs=9;ExactMatchIDs=HG2_10X_allpass_1852:HG2_PB_SVrefine2Falcon2Bionano_5423:HG2_PB_SVrefine2PB10Xhap12_8243:HG3_10X_allpass_2238:HG3_PB_SVrefine2Falcon1Dovetail_6815:HG3_PB_SVrefine2PBcRDovetail_5283;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00884956;ClusterMaxSizeDiff=0.00881057;ClusterMaxEditDist=0.0176991;PBcalls=7;Illcalls=0;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=2;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-227;DistBack=4693;DistForward=-225;DistMin=-225;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=224;REFWIDENED=10:55086501-55086951;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=420.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:17:0|1:36:1:0:18:./.:0:2:19:0:0/1:15:4:./.:.:.:.:.:.
chr10	55725740	HG4_Ill_manta_2707	CATCTTAGAACTTCCTGGATGATTTTTACAGATAAGATTGTATGTATATAAATATGAACATATGACTAAAATAGTTTGCTATCCAGAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7943:HG2_PB_pbsv_11312:HG4_PB_pbsv_11328:HG4_PB_HySA_16476:HG2_PB_HySA_20456:HG4_Ill_svaba_14178:HG4_Ill_scalpel_10401:HG4_Ill_manta_2707:HG4_Ill_Krunchall_15748:HG4_Ill_GATKHC_18203:HG4_Ill_GATKHCSBGrefine_7810:HG4_Ill_250bpfermikitraw_15017:HG4_Ill_150bpfermikitraw_14385:HG3_Ill_svaba_14254:HG3_Ill_manta_2596:HG3_Ill_Krunchall_15159:HG3_Ill_GATKHC_18074:HG3_Ill_GATKHCSBGrefine_7534:HG3_Ill_250bpfermikitraw_14719:HG2_Ill_svaba_14090:HG2_Ill_scalpel_10695:HG2_Ill_manta_3192:HG2_Ill_SpiralSDKrefine_1821:HG2_Ill_Krunchall_15456:HG2_Ill_GATKHC_18164:HG2_Ill_GATKHCSBGrefine_7624:HG2_Ill_250bpfermikitraw_15126:HG2_Ill_150bpfermikitraw_14220:HG3_PB_pbsv_11035:HG4_Ill_SVrefine2DISCOVARDovetail_8094:HG2_PB_SVrefine2PBcRplusDovetail_1226:HG2_PB_SVrefine2PB10Xhap12_8245:HG2_PB_SVrefine2Falcon2Bionano_5425:HG2_PB_SVrefine2Falcon1plusDovetail_1282:HG2_Ill_SVrefine2DISCOVARplusDovetail_1450;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14220:HG2_Ill_250bpfermikitraw_15126:HG2_Ill_GATKHCSBGrefine_7624:HG2_Ill_GATKHC_18164:HG2_Ill_Krunchall_15456:HG2_Ill_SpiralSDKrefine_1821:HG2_Ill_manta_3192:HG2_Ill_scalpel_10695:HG2_Ill_svaba_14090:HG3_Ill_250bpfermikitraw_14719:HG3_Ill_GATKHCSBGrefine_7534:HG3_Ill_GATKHC_18074:HG3_Ill_Krunchall_15159:HG3_Ill_manta_2596:HG3_Ill_svaba_14254:HG4_Ill_150bpfermikitraw_14385:HG4_Ill_250bpfermikitraw_15017:HG4_Ill_GATKHCSBGrefine_7810:HG4_Ill_GATKHC_18203:HG4_Ill_Krunchall_15748:HG4_Ill_manta_2707:HG4_Ill_scalpel_10401:HG4_Ill_svaba_14178;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0224719;ClusterMaxSizeDiff=0.0224719;ClusterMaxEditDist=0.0340909;PBcalls=9;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-88;DistBack=1537;DistForward=-29;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=89;REFWIDENED=10:55725713-55725889;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:5:20:0:19:1/1:0:13:0:17:1/1:0:34:./.:.:.:.:.:.
chr10	55893666	HG2_Ill_manta_3193	CACACACACATACATATAACATTTTGTACAAACATACCACCACTGCCTAAGATGTATGCTTTGAATTTAACAAAGTCATGATTTAGTTCAAAACACATTTGTTATAATTTCTATTTGGGGATGAGAATCTTTATTTATTTATTTATTTATTTATTTGAGACGGAGAGTTGCTCTCCAGCCCAGGCTGGAGTGCAGTGGCATGATCTTTGCTCATTGCAACCCCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCCTGTGTCAAAATATCTGGCTAATTTTTGTATTTTCAGTGGAGATGGGTTGTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCTCCTCAACCTCCCAAAGTGCTGGGATAACAGGTATGAGCACCACACCTGGCCTAGAATCTCCTTAAAGTAGTCCCAAACTCTT	TATATATAA	20	PASS	ClusterIDs=HG3_Ill_Krunchall_15162:HG3_PB_HySA_17075:HG2_PB_PB10Xdip_4436:HG3_PB_SVrefine2PBcRDovetail_5285:HG2_PB_SVrefine2PB10Xhap12_8246:HG2_PB_pbsv_11313:HG3_PB_pbsv_11036:HG3_10X_allpass_2239:HG2_10X_allpass_1853:HG2_Ill_tnscope_1271:HG4_PB_assemblyticsfalcon_2739:HG2_PB_assemblyticsfalcon_2838:HG3_Ill_manta_2597:HG3_Ill_SVrefine2DISCOVARDovetail_8303:HG2_PB_SVrefine2Falcon1plusDovetail_1283:HG2_Ill_manta_3193:HG2_10X_SVrefine210Xhap12_7944:HG3_Ill_MetaSV_535:HG2_Ill_MetaSV_562;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7944:HG2_Ill_manta_3193:HG2_PB_SVrefine2Falcon1plusDovetail_1283:HG3_Ill_SVrefine2DISCOVARDovetail_8303:HG3_Ill_manta_2597;NumExactMatchSVs=5;ClusterMaxShiftDist=0.128755;ClusterMaxSizeDiff=0.128755;ClusterMaxEditDist=0.128755;PBcalls=9;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-458;DistBack=20266;DistForward=2104;DistMin=2104;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:55893666-55894132;PctSeqSimilarity=0.9803;PctSizeSimilarity=0.9782;PctRecOverlap=0.9615;SizeDiff=10;StartDistance=-18;EndDistance=0;GTMatch=0;TruScore=97;MatchId=422.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:29:0|1:36:3:2:23:1|0:0:34:63:1:0/1:60:15:0/1:51:13:.:.:.
chr10	56066779	HG2_PB_assemblyticsPBcR_2768	TATATATATATGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATAC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_11039:HG2_PB_pbsv_11317:HG3_Ill_GATKHC_18080:HG3_Ill_GATKHCSBGrefine_7538:HG2_Ill_GATKHC_18172:HG2_Ill_GATKHCSBGrefine_7628:HG4_Ill_GATKHC_18211:HG4_Ill_GATKHCSBGrefine_7815:HG3_Ill_scalpel_10847:HG3_Ill_GATKHC_18079:HG3_Ill_GATKHCSBGrefine_7537:HG3_Ill_150bpfermikitraw_14257:HG3_PB_assemblyticsfalcon_2831:HG4_Ill_scalpel_10404:HG2_Ill_SpiralSDKrefine_1825:HG4_Ill_250bpfermikitraw_15022:HG4_Ill_150bpfermikitraw_14388:HG2_Ill_scalpel_10697:HG2_Ill_manta_3194:HG2_Ill_150bpfermikitraw_14225:HG3_PB_HySA_17079:HG4_Ill_manta_2709:HG2_PB_assemblyticsfalcon_2842:HG4_PB_pbsv_11332:HG4_PB_assemblyticsfalcon_2743:HG4_Ill_GATKHC_18210:HG4_Ill_GATKHCSBGrefine_7814:HG3_Ill_scalpel_10846:HG3_Ill_150bpfermikitraw_14256:HG2_PB_assemblyticsPBcR_2768:HG2_Ill_GATKHC_18171:HG2_Ill_150bpfermikitraw_14224:HG4_PB_HySA_16480;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14224:HG2_Ill_GATKHC_18171:HG2_PB_assemblyticsPBcR_2768:HG3_Ill_150bpfermikitraw_14256:HG3_Ill_scalpel_10846:HG4_Ill_GATKHCSBGrefine_7814:HG4_Ill_GATKHC_18210:HG4_PB_assemblyticsfalcon_2743;NumExactMatchSVs=8;ClusterMaxShiftDist=0.366667;ClusterMaxSizeDiff=0.366667;ClusterMaxEditDist=0.366667;PBcalls=9;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=11742;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=89;REFWIDENED=10:56066760-56066910;PctSeqSimilarity=0.9844;PctSizeSimilarity=0.9688;PctRecOverlap=0.9692;SizeDiff=-2;StartDistance=2;EndDistance=0;GTMatch=0;TruScore=97;MatchId=423.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:36:1/1:2:20:1:14:./.:4:5:12:2:0/1:12:15:./.:.:.:.:.:.
chr10	57302324	HG2_PB_SVrefine2Falcon1plusDovetail_1289	CACATATATACATATGTATGTGTCTATATAGGTACATACAGACATATGTATGTGTCTATATAGGTACATACAGACATATGTATGTGTCTATATAGGTACATACAGACATATGTATGTGTCTATATAGGTACATACAGACATATGTTTGTGTCTATATAGGT	C	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_6871:HG4_PB_pbsv_11345:HG2_PB_SVrefine2Falcon2Bionano_5431:HG3_PB_pbsv_11053:HG2_PB_pbsv_11329:HG2_PB_SVrefine2PBcRplusDovetail_1231:HG2_PB_SVrefine2Falcon1plusDovetail_1289;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1289:HG2_PB_SVrefine2PBcRplusDovetail_1231;NumExactMatchSVs=2;ClusterMaxShiftDist=0.236934;ClusterMaxSizeDiff=0.236111;ClusterMaxEditDist=0.25784;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-160;DistBack=-495;DistForward=-69;DistMin=-495;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=469;REFWIDENED=10:57302309-57302937;PctSeqSimilarity=0.9867;PctSizeSimilarity=0.9938;PctRecOverlap=0.3043;SizeDiff=1;StartDistance=-112;EndDistance=-111;GTMatch=0;TruScore=76;MatchId=424.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:25:./.:21:7:10:12:./.:12:0:3:0:0/1:11:2:./.:.:.:.:.:.
chr10	57702025	HG2_Ill_scalpel_10712	TGACTTATTCTAATTTCATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_785:HG4_PB_HySA_16500:HG2_10X_allpass_1855:HG4_Ill_Krunchall_15772:HG3_Ill_Krunchall_15179:HG4_PB_assemblyticsfalcon_2769:HG3_PB_assemblyticsfalcon_2848:HG2_PB_assemblyticsfalcon_2865:HG4_Ill_Krunchall_15771:HG3_Ill_Krunchall_15178:HG2_Ill_Krunchall_15476:HG4_Ill_Spiral_920:HG3_Ill_Spiral_11825:HG2_PB_HySA_20487:HG2_PB_pbsv_11330:HG4_PB_pbsv_11346:HG3_PB_pbsv_11054:HG4_Ill_MetaSV_575:HG2_Ill_tnscope_1272:HG4_PB_SVrefine2Falcon1Dovetail_6872:HG4_Ill_scalpel_10419:HG4_Ill_manta_2715:HG4_Ill_SVrefine2DISCOVARDovetail_8107:HG4_Ill_GATKHCSBGrefine_7824:HG4_10X_allpass_2164:HG3_PB_SVrefine2PBcRDovetail_5291:HG3_PB_SVrefine2Falcon1Dovetail_6823:HG3_Ill_scalpel_10859:HG3_Ill_manta_2599:HG3_Ill_SVrefine2DISCOVARDovetail_8308:HG3_Ill_GATKHCSBGrefine_7545:HG3_10X_allpass_2242:HG2_PB_SVrefine2PBcRplusDovetail_1232:HG2_PB_SVrefine2PB10Xhap12_8250:HG2_PB_SVrefine2Falcon2Bionano_5432:HG2_PB_SVrefine2Falcon1plusDovetail_1290:HG2_Ill_scalpel_10712:HG2_Ill_manta_3199:HG2_Ill_SVrefine2DISCOVARplusDovetail_1456:HG2_Ill_MetaSV_565:HG2_Ill_GATKHCSBGrefine_7636:HG2_10X_SVrefine210Xhap12_7949:HG2_Ill_breakscan11_1638;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7949:HG2_Ill_GATKHCSBGrefine_7636:HG2_Ill_MetaSV_565:HG2_Ill_SVrefine2DISCOVARplusDovetail_1456:HG2_Ill_manta_3199:HG2_Ill_scalpel_10712:HG2_PB_SVrefine2Falcon1plusDovetail_1290:HG2_PB_SVrefine2Falcon2Bionano_5432:HG2_PB_SVrefine2PB10Xhap12_8250:HG2_PB_SVrefine2PBcRplusDovetail_1232:HG3_10X_allpass_2242:HG3_Ill_GATKHCSBGrefine_7545:HG3_Ill_SVrefine2DISCOVARDovetail_8308:HG3_Ill_manta_2599:HG3_Ill_scalpel_10859:HG3_PB_SVrefine2Falcon1Dovetail_6823:HG3_PB_SVrefine2PBcRDovetail_5291:HG4_10X_allpass_2164:HG4_Ill_GATKHCSBGrefine_7824:HG4_Ill_SVrefine2DISCOVARDovetail_8107:HG4_Ill_manta_2715:HG4_Ill_scalpel_10419:HG4_PB_SVrefine2Falcon1Dovetail_6872;NumExactMatchSVs=23;ClusterMaxShiftDist=0.133132;ClusterMaxSizeDiff=0.133132;ClusterMaxEditDist=0.133132;PBcalls=15;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-340;DistBack=1572;DistForward=-341;DistMin=-341;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=22;REFWIDENED=10:57702026-57702387;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=425.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:0|1:26:0:1:28:1|0:0:25:33:0:0/1:12:26:0/1:25:5:.:.:.
chr10	61202685	HG2_PB_SVrefine2Falcon1plusDovetail_1297	TAAGTTTAAACAAGCAGGTAAAAATCTATACATTGAAAACTACAAAACGTTGATGAAAGAAATTGAAGAAGACAAATGAACGGAAAGATATCCCATGTTCATGGATTGAAAGAATTAATAGTATTAAAATGGCCATACTTTCCTAAGCTATCTACAGATTCAATGCAATACCTATCAAAATTCCAATGTCATTTTATATAAAACAGAAAACATGATCCTAGTATTCACATGGAACCATGAAAAAGAGCCAACAAATAGCCAGAGCAATCATGAGCAAAAAGCGAGAGGTATTACACTGTTTACAAATTATACTACAAAACTTTGGTAATTAAAACAGCATGGTTTGGGGGAAAAAAGAAAATAGACACATCAAAAAAAAAATAGAGCAGAATAAAGAACCCAAAAATGAACTCACTCATGTATGGTCAATTGATTTTCAACAAAGGGGCCAAGAATACAAAATGGGAAAAACATACTCCTTATAATCAACATTTTAAGGAAAACTGGATATATGCATGCAGGAGAATGAAACTGGATCCTCCTTATCTCACACCATATTAAAACTAACTCAAAATGAATTAAAGACTTACAGGTAAGGCCAAAACCTATAAAAAGTACTAGGATAAAATGGGGGGAAAACTGCACAACATTGATCTGGGCAATAACTTTTTGGATTTGAACTAAAAAGTATGTGCATCAAAAGCAAAAATAGACAAACGAAATTACATGAAACCAAAAACTTTCTTCACAACAAAGGAAGCAGTTAACTGTGTGCAGAGATTGGGAGAAAGTATTTTCAAGCTATATATTGATAAAGTGTTAATATCCAAACTATGTAAAGAG	T	20	PASS	ClusterIDs=HG2_PB_pbsv_11344:HG2_Ill_tnscope_1275:HG4_PB_pbsv_11359:HG4_Ill_manta_2719:HG4_Ill_MetaSV_584:HG4_Ill_GATKHCSBGrefine_7847:HG4_10X_allpass_2168:HG3_PB_assemblyticsfalcon_2885:HG3_PB_SVrefine2Falcon1Dovetail_6834:HG2_PB_assemblyticsfalcon_2898:HG2_PB_SVrefine2PB10Xhap12_8254:HG2_PB_SVrefine2Falcon1plusDovetail_1297:HG2_Ill_manta_3204:HG2_Ill_breakscan11_1639:HG2_Ill_SpiralSDKrefine_1859:HG2_Ill_SVrefine2DISCOVARplusDovetail_1469:HG2_Ill_MetaSV_569:HG2_Ill_GATKHCSBGrefine_7658:HG2_10X_allpass_1856:HG2_10X_SVrefine210Xhap12_7960:HG4_Ill_Krunchall_15804;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7960:HG2_10X_allpass_1856:HG2_Ill_GATKHCSBGrefine_7658:HG2_Ill_MetaSV_569:HG2_Ill_SVrefine2DISCOVARplusDovetail_1469:HG2_Ill_SpiralSDKrefine_1859:HG2_Ill_breakscan11_1639:HG2_Ill_manta_3204:HG2_PB_SVrefine2Falcon1plusDovetail_1297:HG2_PB_SVrefine2PB10Xhap12_8254:HG2_PB_assemblyticsfalcon_2898:HG3_PB_SVrefine2Falcon1Dovetail_6834:HG3_PB_assemblyticsfalcon_2885:HG4_10X_allpass_2168:HG4_Ill_GATKHCSBGrefine_7847:HG4_Ill_MetaSV_584:HG4_Ill_manta_2719:HG4_PB_pbsv_11359;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00237248;ClusterMaxSizeDiff=0.00237248;ClusterMaxEditDist=0.00355661;PBcalls=7;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-842;DistBack=-836;DistForward=35946;DistMin=-836;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=10:61202686-61203528;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=426.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:33:1|0:2:30:45:1:0|1:61:0:0:23:0/1:54:20:0/1:85:24:.:.:.
chr10	61365481	HG2_PB_pbsv_11345	GTCATCCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1640:HG4_PB_assemblyticsfalcon_2800:HG2_PB_assemblyticsPBcR_2816:HG3_PB_assemblyticsfalcon_2886:HG2_PB_assemblyticsfalcon_2899:HG3_Ill_Krunchall_15209:HG2_Ill_Krunchall_15507:HG4_PB_HySA_16527:HG2_PB_HySA_20515:HG3_PB_HySA_17126:HG4_Ill_MetaSV_585:HG3_Ill_MetaSV_548:HG2_Ill_tnscope_1276:HG2_Ill_MetaSV_570:HG4_PB_pbsv_11360:HG4_PB_SVrefine2Falcon1Dovetail_6882:HG4_PB_HySA_16526:HG4_Ill_scalpel_10444:HG4_Ill_manta_2720:HG4_Ill_SVrefine2DISCOVARDovetail_8124:HG4_Ill_GATKHCSBGrefine_7849:HG4_10X_allpass_2169:HG3_PB_pbsv_11069:HG3_PB_SVrefine2PBcRDovetail_5300:HG3_PB_SVrefine2Falcon1Dovetail_6835:HG3_Ill_scalpel_10883:HG3_Ill_manta_2604:HG3_Ill_SVrefine2DISCOVARDovetail_8322:HG3_Ill_GATKHCSBGrefine_7568:HG3_10X_allpass_2246:HG2_PB_pbsv_11345:HG2_PB_SVrefine2PBcRplusDovetail_1240:HG2_PB_SVrefine2PB10Xhap12_8255:HG2_PB_SVrefine2Falcon2Bionano_5437:HG2_PB_SVrefine2Falcon1plusDovetail_1298:HG2_Ill_scalpel_10729:HG2_Ill_SVrefine2DISCOVARplusDovetail_1470:HG2_Ill_GATKHCSBGrefine_7660:HG2_10X_allpass_1857:HG2_10X_SVrefine210Xhap12_7961;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7961:HG2_10X_allpass_1857:HG2_Ill_GATKHCSBGrefine_7660:HG2_Ill_SVrefine2DISCOVARplusDovetail_1470:HG2_Ill_scalpel_10729:HG2_PB_SVrefine2Falcon1plusDovetail_1298:HG2_PB_SVrefine2Falcon2Bionano_5437:HG2_PB_SVrefine2PB10Xhap12_8255:HG2_PB_SVrefine2PBcRplusDovetail_1240:HG2_PB_pbsv_11345:HG3_10X_allpass_2246:HG3_Ill_GATKHCSBGrefine_7568:HG3_Ill_SVrefine2DISCOVARDovetail_8322:HG3_Ill_manta_2604:HG3_Ill_scalpel_10883:HG3_PB_SVrefine2Falcon1Dovetail_6835:HG3_PB_SVrefine2PBcRDovetail_5300:HG3_PB_pbsv_11069:HG4_10X_allpass_2169:HG4_Ill_GATKHCSBGrefine_7849:HG4_Ill_SVrefine2DISCOVARDovetail_8124:HG4_Ill_manta_2720:HG4_Ill_scalpel_10444:HG4_PB_HySA_16526:HG4_PB_SVrefine2Falcon1Dovetail_6882:HG4_PB_pbsv_11360;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0796178;ClusterMaxSizeDiff=0.0796178;ClusterMaxEditDist=0.0796178;PBcalls=18;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=9168;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=10:61365482-61365813;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=427.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:25:0:33:1/1:0:16:0:25:1/1:0:30:./.:1:11:.:.:.
chr10	61441156	HG2_Ill_SVrefine2DISCOVARplusDovetail_1472	AGTATATATATATGTATATGTATATGTATATGTATATGATGTATATGTATATGTGTATGTGTATGTGTATGTATATGTATATGTATATGTATATGTATATGTATATGTATATGATGTATATGTATATGTGTATGTGTATGTGTATGTATATGTATATGTATATGATGTATATGTATATGTGTATGTGTATGTATATGTATATGTATATGTATATGTATATGTATATGATGTATATGTATATGTGTATGTGTATGTATATGTATATGA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8256:HG3_Ill_manta_2606:HG2_PB_pbsv_11346:HG4_PB_SVrefine2Falcon1Dovetail_6883:HG3_PB_SVrefine2Falcon1Dovetail_6836:HG3_Ill_SVrefine2DISCOVARDovetail_8324:HG2_Ill_SVrefine2DISCOVARplusDovetail_1472:HG3_PB_pbsv_11070;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1472:HG3_Ill_SVrefine2DISCOVARDovetail_8324:HG3_PB_SVrefine2Falcon1Dovetail_6836;NumExactMatchSVs=3;ClusterMaxShiftDist=0.316703;ClusterMaxSizeDiff=0.316703;ClusterMaxEditDist=0.316703;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-266;DistBack=2851;DistForward=-265;DistMin=-265;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=222;REFWIDENED=10:61441168-61441644;PctSeqSimilarity=0.8791;PctSizeSimilarity=0.9173;PctRecOverlap=0.8052;SizeDiff=22;StartDistance=-52;EndDistance=-30;GTMatch=0;TruScore=86;MatchId=428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:34:./.:21:15:6:8:./.:12:10:50:4:0/1:28:24:./.:.:.:.:.:.
chr10	63743614	HG3_Ill_manta_2610	CCCCCTTTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCG	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_572:HG3_PB_assemblyticsfalcon_2899:HG3_Ill_Spiral_11862:HG2_Ill_Spiral_787:HG4_PB_pbsv_11371:HG3_PB_pbsv_11076:HG2_Ill_breakscan11_1641:HG4_Ill_svaba_14234:HG4_Ill_scalpel_10459:HG4_Ill_manta_2723:HG4_Ill_SVrefine2DISCOVARDovetail_8133:HG4_Ill_MetaSV_588:HG4_Ill_GATKHCSBGrefine_7858:HG3_PB_SVrefine2Falcon1Dovetail_6841:HG3_PB_HySA_17138:HG3_Ill_svaba_14312:HG3_Ill_scalpel_10892:HG3_Ill_manta_2610:HG3_Ill_SVrefine2DISCOVARDovetail_8337:HG3_Ill_MetaSV_551:HG3_Ill_GATKHCSBGrefine_7577:HG2_PB_SVrefine2Falcon2Bionano_5443:HG2_Ill_svaba_14152:HG2_Ill_scalpel_10740:HG2_Ill_manta_3210:HG2_Ill_SVrefine2DISCOVARplusDovetail_1480:HG2_Ill_GATKHCSBGrefine_7669:HG2_10X_SVrefine210Xhap12_7968:HG2_PB_pbsv_11352:HG2_PB_HySA_20535;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7968:HG2_Ill_GATKHCSBGrefine_7669:HG2_Ill_SVrefine2DISCOVARplusDovetail_1480:HG2_Ill_manta_3210:HG2_Ill_scalpel_10740:HG2_Ill_svaba_14152:HG2_PB_SVrefine2Falcon2Bionano_5443:HG3_Ill_GATKHCSBGrefine_7577:HG3_Ill_MetaSV_551:HG3_Ill_SVrefine2DISCOVARDovetail_8337:HG3_Ill_manta_2610:HG3_Ill_scalpel_10892:HG3_Ill_svaba_14312:HG3_PB_HySA_17138:HG3_PB_SVrefine2Falcon1Dovetail_6841:HG4_Ill_GATKHCSBGrefine_7858:HG4_Ill_MetaSV_588:HG4_Ill_SVrefine2DISCOVARDovetail_8133:HG4_Ill_manta_2723:HG4_Ill_scalpel_10459:HG4_Ill_svaba_14234;NumExactMatchSVs=21;ClusterMaxShiftDist=0.156977;ClusterMaxSizeDiff=0.156977;ClusterMaxEditDist=0.156977;PBcalls=8;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-178;DistBack=42889;DistForward=-170;DistMin=-170;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=10:63743615-63743806;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=429.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:21:./.:8:13:16:3:0|1:24:0:0:11:0/1:22:11:./.:.:.:.:.:.
chr10	64040763	HG2_Ill_150bpfermikitraw_14295	CTTGTAAATACACCAGTGGACACTCTGTATCTAGCTGCTCTGGTGAGGACGTGGAGAACCTTTATGTCTAGCTCAGGGA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5444:HG2_PB_HySA_20537:HG3_PB_pbsv_11077:HG2_PB_pbsv_11353:HG3_Ill_Krunchall_15225:HG3_Ill_GATKHCSBGrefine_7578:HG2_Ill_scalpel_10741:HG2_Ill_GATKHC_18248:HG2_Ill_GATKHCSBGrefine_7670:HG2_Ill_250bpfermikitraw_15202:HG2_Ill_150bpfermikitraw_14295:HG2_PB_SVrefine2PBcRplusDovetail_1247:HG2_PB_SVrefine2PB10Xhap12_8263;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14295:HG2_Ill_250bpfermikitraw_15202:HG2_Ill_GATKHCSBGrefine_7670:HG2_Ill_GATKHC_18248:HG2_Ill_scalpel_10741:HG3_Ill_GATKHCSBGrefine_7578:HG3_Ill_Krunchall_15225;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.127389;PBcalls=6;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=-34;DistForward=11248;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=128;REFWIDENED=10:64040671-64040876;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=430.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:30:./.:19:26:4:8:0|1:21:0:0:7:0/1:27:20:./.:.:.:.:.:.
chr10	66841805	HG2_PB_SVrefine2PBcRplusDovetail_1253	GTTTTTGTGTGCATGTCTACTTTGCTGTTAAACTAATCCAATGAGTTATAACTATAATCAATTTTATAAATCTCAAATATTTGTTAAAATTCTTTTCCTCTGTCCTCTTTAACATATTGATGACAGCTATTTTAATGGTCATATTTTTTTCTTATTTAAATGCCTACCAATAATTTTTAATTGGTGTCACACTTTGTATATAAGAAAACTATAAGGACCCTGGACAATTTTATCTTCTAGTAGATAGGGCCTCTTTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7973:HG2_Ill_Krunchall_15549:HG4_PB_assemblyticsfalcon_2835:HG3_PB_HySA_17160:HG3_Ill_Spiral_11882:HG3_Ill_MetaSV_557:HG2_Ill_MetaSV_576:HG3_PB_pbsv_11091:HG3_PB_SVrefine2Falcon1Dovetail_6850:HG3_Ill_manta_2614:HG3_Ill_GATKHCSBGrefine_7586:HG3_Ill_Cortex_412:HG3_10X_allpass_2251:HG2_PB_pbsv_11366:HG2_PB_SVrefine2PBcRplusDovetail_1253:HG2_PB_SVrefine2Falcon1plusDovetail_1310:HG2_Ill_manta_3213:HG2_Ill_breakscan11_1642:HG2_Ill_SpiralSDKrefine_1887:HG2_Ill_SVrefine2DISCOVARplusDovetail_1486:HG2_Ill_GATKHCSBGrefine_7675:HG2_Ill_Cortex_936;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7973:HG3_PB_pbsv_11091:HG3_PB_SVrefine2Falcon1Dovetail_6850:HG3_Ill_manta_2614:HG3_Ill_GATKHCSBGrefine_7586:HG3_Ill_Cortex_412:HG3_10X_allpass_2251:HG2_PB_pbsv_11366:HG2_PB_SVrefine2PBcRplusDovetail_1253:HG2_PB_SVrefine2Falcon1plusDovetail_1310:HG2_Ill_manta_3213:HG2_Ill_breakscan11_1642:HG2_Ill_SpiralSDKrefine_1887:HG2_Ill_SVrefine2DISCOVARplusDovetail_1486:HG2_Ill_GATKHCSBGrefine_7675:HG2_Ill_Cortex_936;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0077821;ClusterMaxSizeDiff=0.0077821;ClusterMaxEditDist=0.0116732;PBcalls=7;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-256;DistBack=-257;DistForward=-252;DistMin=-257;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=10:66841806-66842068;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:1|0:2:29:30:1:0|1:45:0:0:31:0/1:57:20:./.:.:.:.:1558:.
chr10	67602986	HG2_Ill_Cortex_941	ATAAGTATCCATGAATCTACAGTGGTAGAAATAAATGGTTGCAAAATAAATAAATATTACAGACGATAAAAATATCCTGTGCAGAAGACATGCTAATAATTTATGTGGCTAC	GTATCAT	20	PASS	ClusterIDs=HG3_PB_pbsv_11100:HG3_Ill_GATKHC_18178:HG3_Ill_GATKHCSBGrefine_7591:HG3_CG_vcfBeta_6141:HG2_Ill_GATKHC_18282:HG2_Ill_GATKHCSBGrefine_7683:HG3_Ill_svaba_14342:HG3_Ill_scalpel_10918:HG3_Ill_250bpfermikitraw_14801:HG3_Ill_150bpfermikitraw_14342:HG3_10X_allpass_2253:HG2_Ill_svaba_14185:HG2_10X_allpass_1858:HG3_PB_HySA_17163:HG2_Ill_SpiralSDKrefine_1892:HG3_Ill_Krunchall_15253:HG2_Ill_Krunchall_15557:HG4_PB_SVrefine2Falcon1Dovetail_6900:HG3_PB_assemblyticsfalcon_2929:HG3_PB_SVrefine2PBcRDovetail_5316:HG3_PB_SVrefine2Falcon1Dovetail_6857:HG3_Ill_manta_2616:HG3_Ill_SVrefine2DISCOVARDovetail_8353:HG3_Ill_Cortex_416:HG2_PB_assemblyticsfalcon_2941:HG2_PB_SVrefine2Falcon2Bionano_5454:HG2_PB_SVrefine2Falcon1plusDovetail_1316:HG2_Ill_Cortex_941:HG2_10X_SVrefine210Xhap12_7977:HG2_PB_pbsv_11373:HG3_Ill_MetaSV_561:HG3_Ill_Spiral_11888:HG2_Ill_Spiral_789:HG4_PB_assemblyticsfalcon_2841;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7977:HG2_Ill_Cortex_941:HG2_PB_SVrefine2Falcon1plusDovetail_1316:HG2_PB_SVrefine2Falcon2Bionano_5454:HG2_PB_assemblyticsfalcon_2941:HG3_Ill_Cortex_416:HG3_Ill_SVrefine2DISCOVARDovetail_8353:HG3_Ill_manta_2616:HG3_PB_SVrefine2Falcon1Dovetail_6857:HG3_PB_SVrefine2PBcRDovetail_5316:HG3_PB_assemblyticsfalcon_2929:HG4_PB_SVrefine2Falcon1Dovetail_6900;NumExactMatchSVs=12;ClusterMaxShiftDist=0.12093;ClusterMaxSizeDiff=0.12093;ClusterMaxEditDist=0.12093;PBcalls=11;Illcalls=19;TenXcalls=3;CGcalls=1;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=19;HG4count=2;NumTechs=4;NumTechsExact=3;SVLEN=-105;DistBack=14027;DistForward=-74;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:67602986-67603097;PctSeqSimilarity=0.9484;PctSizeSimilarity=0.9524;PctRecOverlap=0.9018;SizeDiff=5;StartDistance=-11;EndDistance=0;GTMatch=0;TruScore=93;MatchId=432.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:16:0|1:28:0:1:16:0|1:42:2:0:26:0/1:43:17:./.:.:.:.:.:.
chr10	70587384	HG2_10X_SVrefine210Xhap12_7987	GCCCGGCCCGTGCAGCTGGCGCCGGGCTCGCTGGCGCTAGTGCTGTGCCGGCTGGAGGCGCAGAAGGCGGCGGGGGCCGCGGAGGAGCCTGGTGGGCGCGCGGTGTTCCGCGCTTTCCGTCGCGCCAACGCGCGCTGCTTCTGGAACGCGCGGCTGGCGCGCGCCGCCTCGCGGCTGGCCTTCCAGGGCTGGCTGCGGCGGGGGGTGCTGCTGGTGCGCGCGCCCCCCGCCTGCCTGCAGGTGCTGCGCGATGCCTGGCGGCGCCGGGCCCTGCGGCCGCCGCGCGGCTTCCGCATCAGGGCGGTGGGTGAGTGCGGGACCCGGAGGGGAGGGGCGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7987:HG4_PB_HySA_16612:HG4_PB_pbsv_11398:HG3_PB_HySA_17191:HG4_Ill_MetaSV_596:HG3_PB_pbsv_11109:HG2_PB_pbsv_11385:HG2_PB_HySA_20612:HG4_PB_SVrefine2Falcon1Dovetail_6906:HG4_Ill_SVrefine2DISCOVARDovetail_8155:HG3_PB_SVrefine2PBcRDovetail_5321:HG3_PB_SVrefine2Falcon1Dovetail_6861:HG3_Ill_SVrefine2DISCOVARDovetail_8365:HG2_PB_SVrefine2PBcRplusDovetail_1260:HG2_PB_SVrefine2PB10Xhap12_8277:HG2_PB_SVrefine2Falcon2Bionano_5460:HG2_PB_SVrefine2Falcon1plusDovetail_1320:HG2_Ill_SVrefine2DISCOVARplusDovetail_1503;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7987:HG4_PB_SVrefine2Falcon1Dovetail_6906:HG4_Ill_SVrefine2DISCOVARDovetail_8155:HG3_PB_SVrefine2PBcRDovetail_5321:HG3_PB_SVrefine2Falcon1Dovetail_6861:HG3_Ill_SVrefine2DISCOVARDovetail_8365:HG2_PB_SVrefine2PBcRplusDovetail_1260:HG2_PB_SVrefine2PB10Xhap12_8277:HG2_PB_SVrefine2Falcon2Bionano_5460:HG2_PB_SVrefine2Falcon1plusDovetail_1320:HG2_Ill_SVrefine2DISCOVARplusDovetail_1503;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0178571;ClusterMaxSizeDiff=0.0178571;ClusterMaxEditDist=0.0179641;PBcalls=13;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=30114;DistForward=-224;DistMin=-224;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=340;REFWIDENED=10:70587385-70588060;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=433.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:0:17:1:25:./.:0:0:0:0:1/1:0:10:./.:2:4:.:.:.
chr10	70634324	HG3_10X_allpass_2256	TAAAAACCCTTGCTTCCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_11915:HG3_Ill_Krunchall_15286:HG2_Ill_Krunchall_15592:HG2_Ill_Spiral_791:HG3_PB_pbsv_11110:HG3_Ill_svaba_14374:HG3_Ill_scalpel_10944:HG3_Ill_manta_2619:HG3_Ill_SVrefine2DISCOVARDovetail_8366:HG3_Ill_MetaSV_562:HG3_Ill_GATKHC_18218:HG3_Ill_GATKHCSBGrefine_7596:HG3_10X_allpass_2256:HG2_PB_pbsv_11386:HG2_PB_SVrefine2PB10Xhap12_8278:HG2_Ill_svaba_14218:HG2_Ill_scalpel_10789:HG2_Ill_manta_3218:HG2_Ill_SpiralSDKrefine_1914:HG2_Ill_MetaSV_579:HG2_Ill_GATKHC_18322:HG2_Ill_GATKHCSBGrefine_7689:HG2_10X_allpass_1859:HG2_PB_SVrefine2PBcRplusDovetail_1261:HG2_PB_SVrefine2Falcon2Bionano_5461:HG2_Ill_breakscan11_1643;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_1859:HG2_Ill_GATKHCSBGrefine_7689:HG2_Ill_GATKHC_18322:HG2_Ill_MetaSV_579:HG2_Ill_SpiralSDKrefine_1914:HG2_Ill_manta_3218:HG2_Ill_scalpel_10789:HG2_Ill_svaba_14218:HG2_PB_SVrefine2PB10Xhap12_8278:HG2_PB_pbsv_11386:HG3_10X_allpass_2256:HG3_Ill_GATKHCSBGrefine_7596:HG3_Ill_GATKHC_18218:HG3_Ill_MetaSV_562:HG3_Ill_SVrefine2DISCOVARDovetail_8366:HG3_Ill_manta_2619:HG3_Ill_scalpel_10944:HG3_Ill_svaba_14374;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0176991;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.0178571;PBcalls=5;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-112;DistBack=46600;DistForward=-99;DistMin=-99;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=10:70634325-70634450;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=434.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:1|0:6:25:16:4:0|1:31:0:0:17:0/1:24:24:./.:.:.:.:.:.
chr10	70786302	HG2_PB_SVrefine2PBcRplusDovetail_1263	AAACTCCTGGGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAAATGCTGGGATTACAGGCCTGAGCCTGTAACTAAACTTGAGGCATGAGTCTGTTTCTAAGCTTGCCATAGACACCTTCAGTGCATGTCTGCTTTTTGATTACCACAGTTGCTAATCGTGGGTTATAAAAATATAGAATTCAAATATGTTAGGGCAATAATAAATTATATATAGATGCATTGATGTTGCAGTACATAAATGAGCCTTTCAGTCATTTTGCATTCTAGATAGATGTAATCTTTTTTAAAAAAATTAATTGCTTTCATCTTGAGCCTGGGATGTCAAGGCTGCAGTGAGCCATGATTGCATTACTGCACTGCAGCCTGGGTGACAGAGAGAGACCCTGTGTCATAAACATAAATAAATATTTTTAAAAAGATTCTAAGGCTGAGCATGGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCTGAGGCAGGAGGATTGCTTGAGACTAGGAGTTCGAGACCAACCTGGGCAACATAGGGAGACTCCTGTCTCTACAAATAAAAATTAAGAAAAATTTATTAGAGGCTGCAATGTCTATTACTATTTTTAAGTTATTTATTATTATTAGGGTTTGAAAAAAATCTAGGATGGGAAAACAAAATTCAAGAATGCAACCAGGAACTATGTGTCAAGGAGAAATCCCAGAGAAAGTATAGCTTTCGTTAAGCCTCGCCCATATAACTCATAATGCAACCAGAGTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGGGGCATGATCTCGGCTCACTGCAACCTCTGCCTCCCACGTTCAAACGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCCCGTGACCATACCTGGCTAATTTTTGTATTTTTGGTACAGACGGGAATTTCACTGCGTTGGCCAGGCTAGTTGAG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_581:HG4_PB_pbsv_11400:HG4_PB_assemblyticsfalcon_2871:HG3_PB_assemblyticsfalcon_2955:HG2_PB_assemblyticsfalcon_2970:HG2_PB_assemblyticsPBcR_2889:HG2_10X_allpass_1860:HG4_Ill_Krunchall_15871:HG2_PB_HySA_20618:HG2_PB_pbsv_11389:HG2_Ill_tnscope_1278:HG4_Ill_manta_2728:HG4_Ill_MetaSV_598:HG4_Ill_GATKHCSBGrefine_7876:HG4_10X_allpass_2171:HG2_Ill_GATKHCSBGrefine_7691:HG4_PB_SVrefine2PBcRDovetail_5696:HG4_PB_SVrefine2Falcon1Dovetail_6909:HG4_Ill_SVrefine2DISCOVARDovetail_8158:HG3_PB_SVrefine2Falcon1Dovetail_6864:HG2_PB_SVrefine2PBcRplusDovetail_1263:HG2_PB_SVrefine2Falcon1plusDovetail_1323:HG2_Ill_SVrefine2DISCOVARplusDovetail_1506:HG2_10X_SVrefine210Xhap12_7989;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7989:HG2_Ill_SVrefine2DISCOVARplusDovetail_1506:HG2_PB_SVrefine2Falcon1plusDovetail_1323:HG2_PB_SVrefine2PBcRplusDovetail_1263:HG3_PB_SVrefine2Falcon1Dovetail_6864:HG4_Ill_SVrefine2DISCOVARDovetail_8158:HG4_PB_SVrefine2Falcon1Dovetail_6909:HG4_PB_SVrefine2PBcRDovetail_5696;NumExactMatchSVs=8;ClusterMaxShiftDist=0.324197;ClusterMaxSizeDiff=0.324197;ClusterMaxEditDist=0.324197;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-983;DistBack=11843;DistForward=-942;DistMin=-942;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=66;REFWIDENED=10:70786303-70787351;PctSeqSimilarity=0.9551;PctSizeSimilarity=1;PctRecOverlap=0.9726;SizeDiff=0;StartDistance=-27;EndDistance=-27;GTMatch=0;TruScore=97;MatchId=435.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:0|1:35:1:1:24:./.:3:25:59:1:0/1:52:19:0/1:74:39:.:.:.
chr10	70998111	HG3_Ill_SVrefine2DISCOVARDovetail_8371	CACCAGGTATTTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTAC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_583:HG2_10X_allpass_1861:HG4_Ill_Krunchall_15872:HG3_Ill_Krunchall_15288:HG2_PB_pbsv_11390:HG2_Ill_Krunchall_15593:HG4_PB_assemblyticsfalcon_2873:HG3_PB_assemblyticsfalcon_2957:HG2_PB_assemblyticsfalcon_2971:HG2_PB_assemblyticsPBcR_2890:HG3_PB_HySA_17194:HG4_Ill_GATKHCSBGrefine_7877:HG3_Ill_GATKHCSBGrefine_7598:HG2_Ill_GATKHCSBGrefine_7692:HG4_Ill_Spiral_924:HG2_Ill_Spiral_792:HG4_PB_HySA_16615:HG2_PB_HySA_20620:HG4_PB_SVrefine2PBcRDovetail_5697:HG4_PB_SVrefine2Falcon1Dovetail_6910:HG4_Ill_manta_2729:HG4_Ill_SVrefine2DISCOVARDovetail_8160:HG3_PB_SVrefine2PBcRDovetail_5323:HG3_PB_SVrefine2Falcon1Dovetail_6865:HG3_Ill_manta_2620:HG3_Ill_SVrefine2DISCOVARDovetail_8371:HG2_PB_SVrefine2PBcRplusDovetail_1264:HG2_PB_SVrefine2PB10Xhap12_8281:HG2_PB_SVrefine2Falcon2Bionano_5464:HG2_PB_SVrefine2Falcon1plusDovetail_1324:HG2_Ill_manta_3219:HG2_Ill_SVrefine2DISCOVARplusDovetail_1508:HG2_10X_SVrefine210Xhap12_7993:HG2_Ill_breakscan11_1644:HG3_Ill_Spiral_11916:HG4_Ill_MetaSV_602:HG4_PB_pbsv_11401:HG4_Ill_MetaSV_601:HG4_10X_allpass_2172:HG3_PB_pbsv_11113:HG3_Ill_scalpel_10945:HG3_10X_allpass_2257:HG2_Ill_scalpel_10790:HG3_Ill_MetaSV_565;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7993:HG2_Ill_SVrefine2DISCOVARplusDovetail_1508:HG2_Ill_manta_3219:HG2_PB_SVrefine2Falcon1plusDovetail_1324:HG2_PB_SVrefine2Falcon2Bionano_5464:HG2_PB_SVrefine2PB10Xhap12_8281:HG2_PB_SVrefine2PBcRplusDovetail_1264:HG3_Ill_SVrefine2DISCOVARDovetail_8371:HG3_Ill_manta_2620:HG3_PB_SVrefine2Falcon1Dovetail_6865:HG3_PB_SVrefine2PBcRDovetail_5323:HG4_Ill_SVrefine2DISCOVARDovetail_8160:HG4_Ill_manta_2729:HG4_PB_SVrefine2Falcon1Dovetail_6910:HG4_PB_SVrefine2PBcRDovetail_5697;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0876369;ClusterMaxSizeDiff=0.0876369;ClusterMaxEditDist=0.0876369;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-899;DistForward=-308;DistMin=-899;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:70998111-70998434;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9907;SizeDiff=0;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=99;MatchId=436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:42:1/1:3:29:0:14:1/1:0:30:0:20:1/1:0:35:0/1:2:18:.:.:.
chr10	71314957	HG3_Ill_GATKHCSBGrefine_7602	ATATATATACATATATGTGTATATATATATATATGTATATATGTATATATATATGTATATATGTATATATATATATGTATATATGTATATATATATATGTGTATATATG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_11394:HG4_Ill_Krunchall_15875:HG2_Ill_Krunchall_15600:HG4_PB_assemblyticsfalcon_2876:HG3_PB_assemblyticsfalcon_2962:HG2_PB_assemblyticsPBcR_2894:HG2_PB_assemblyticsfalcon_2979:HG3_Ill_Krunchall_15295:HG2_PB_HySA_20625:HG4_PB_HySA_16616:HG4_PB_pbsv_11404:HG4_PB_SVrefine2PBcRDovetail_5698:HG4_Ill_svaba_14284:HG4_Ill_GATKHC_18346:HG4_Ill_GATKHCSBGrefine_7880:HG4_Ill_svaba_14283:HG4_Ill_scalpel_10497:HG4_Ill_manta_2731:HG4_Ill_SVrefine2DISCOVARDovetail_8162:HG4_Ill_MetaSV_604:HG4_Ill_GATKHC_18345:HG4_Ill_GATKHCSBGrefine_7879:HG4_Ill_150bpfermikitraw_14508:HG4_10X_allpass_2174:HG3_PB_SVrefine2Falcon1Dovetail_6868:HG3_Ill_svaba_14382:HG3_Ill_manta_2621:HG3_Ill_SVrefine2DISCOVARDovetail_8372:HG3_Ill_GATKHC_18227:HG3_Ill_GATKHCSBGrefine_7602:HG2_PB_SVrefine2Falcon2Bionano_5465:HG2_PB_SVrefine2Falcon1plusDovetail_1327:HG2_Ill_svaba_14226:HG2_Ill_SVrefine2DISCOVARplusDovetail_1509:HG2_Ill_GATKHC_18329:HG2_Ill_GATKHCSBGrefine_7696:HG2_10X_SVrefine210Xhap12_7995:HG4_PB_SVrefine2Falcon1Dovetail_6912:HG2_PB_SVrefine2PBcRplusDovetail_1265:HG2_PB_SVrefine2PB10Xhap12_8283:HG3_Ill_svaba_14381:HG3_Ill_GATKHC_18226:HG3_Ill_GATKHCSBGrefine_7601:HG3_CG_vcfBeta_6165:HG3_10X_allpass_2259:HG2_PB_assemblyticsfalcon_2978:HG2_PB_SVrefine2Falcon1plusDovetail_1326:HG2_Ill_svaba_14225:HG2_Ill_scalpel_10794:HG2_Ill_manta_3221:HG2_Ill_GATKHC_18328:HG2_Ill_GATKHCSBGrefine_7695:HG2_10X_SVrefine210Xhap12_7994:HG3_PB_HySA_17200:HG3_PB_SVrefine2PBcRDovetail_5325:HG3_PB_pbsv_11116;NumClusterSVs=56;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7995:HG2_Ill_GATKHCSBGrefine_7696:HG2_Ill_GATKHC_18329:HG2_Ill_SVrefine2DISCOVARplusDovetail_1509:HG2_Ill_svaba_14226:HG2_PB_SVrefine2Falcon1plusDovetail_1327:HG2_PB_SVrefine2Falcon2Bionano_5465:HG3_Ill_GATKHCSBGrefine_7602:HG3_Ill_GATKHC_18227:HG3_Ill_SVrefine2DISCOVARDovetail_8372:HG3_Ill_manta_2621:HG3_Ill_svaba_14382:HG3_PB_SVrefine2Falcon1Dovetail_6868:HG4_10X_allpass_2174:HG4_Ill_150bpfermikitraw_14508:HG4_Ill_GATKHCSBGrefine_7879:HG4_Ill_GATKHC_18345:HG4_Ill_MetaSV_604:HG4_Ill_SVrefine2DISCOVARDovetail_8162:HG4_Ill_manta_2731:HG4_Ill_scalpel_10497:HG4_Ill_svaba_14283;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0720721;ClusterMaxSizeDiff=0.0720721;ClusterMaxEditDist=0.0825688;PBcalls=20;Illcalls=31;TenXcalls=4;CGcalls=1;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=22;HG3count=16;HG4count=18;NumTechs=4;NumTechsExact=3;SVLEN=-108;DistBack=-212;DistForward=39817;DistMin=-212;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=10:71314958-71315080;PctSeqSimilarity=0.9434;PctSizeSimilarity=0.9474;PctRecOverlap=0.9478;SizeDiff=-6;StartDistance=3;EndDistance=-3;GTMatch=0;TruScore=94;MatchId=437.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:5:29:0:26:./.:1:13:4:14:1/1:0:29:./.:.:.:.:.:.
chr10	72391031	HG2_PB_assemblyticsPBcR_2910	GCCCAGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCGCCCCATCTGAGAAGTGAGGAGCCCCTCTGCCCGGCAGCCA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_11402:HG3_Ill_GATKHCSBGrefine_7606:HG2_PB_assemblyticsPBcR_2910:HG2_Ill_GATKHCSBGrefine_7701:HG2_Ill_150bpfermikitraw_14366:HG3_PB_pbsv_11125;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14366:HG2_Ill_GATKHCSBGrefine_7701:HG2_PB_assemblyticsPBcR_2910:HG3_Ill_GATKHCSBGrefine_7606;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0125;ClusterMaxSizeDiff=0.0124224;ClusterMaxEditDist=0.025;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-80;DistBack=-77;DistForward=-80;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=10:72391030-72391115;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:24:0|1:27:3:2:23:0|1:10:1:0:7:0/1:14:14:./.:.:.:.:.:.
chr10	73056726	HG3_Ill_GATKHCSBGrefine_7610	GGCTGCACACCACTCTGGTGGAGGTGAGGGAAGGGCGGCCAGATATTCCGGCTGCACAGCACTGTGGCATAGGTGAGGGAAGGGCCGCCAGATATTCCA	G	10	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_1925:HG3_Ill_manta_2623:HG3_Ill_GATKHC_18250:HG3_Ill_GATKHCSBGrefine_7610;NumClusterSVs=4;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_7610:HG3_Ill_GATKHC_18250:HG3_Ill_manta_2623;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0100503;ClusterMaxSizeDiff=0.0100503;ClusterMaxEditDist=0.110553;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-98;DistBack=-19;DistForward=106258;DistMin=-19;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=302;REFWIDENED=10:73056454-73056853;PctSeqSimilarity=0.77;PctSizeSimilarity=0.5;PctRecOverlap=0.1919;SizeDiff=49;StartDistance=31;EndDistance=80;GTMatch=1;TruScore=48;MatchId=440.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:./.:16:29:6:0:0/0:10:1:14:0:./.:32:4:./.:.:.:.:.:.
chr10	73256581	HG2_PB_SVrefine2PBcRplusDovetail_1277	GGTGTACAGATGGACAGTTGGGATGTCAAAAGGGCTACAGGTGATTCTAAGCTGCAGCCAGGGCTGAAATGACCCTTTGTTGCACTGGGACAGAGGCCCAAGACGGAAGGGATGCCCCGGA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_11134:HG2_PB_SVrefine2PB10Xhap12_8296:HG2_PB_PB10Xdip_4714:HG4_Ill_svaba_14304:HG4_Ill_manta_2734:HG4_Ill_SVrefine2DISCOVARDovetail_8168:HG4_Ill_MetaSV_608:HG4_Ill_GATKHCSBGrefine_7908:HG4_Ill_Cortex_413:HG4_CG_vcfBeta_7270:HG4_10X_allpass_2176:HG3_Ill_svaba_14406:HG3_Ill_manta_2625:HG3_Ill_SVrefine2DISCOVARDovetail_8379:HG3_Ill_MetaSV_571:HG3_Ill_GATKHC_18253:HG3_Ill_GATKHCSBGrefine_7612:HG3_Ill_Cortex_428:HG3_CG_vcfBeta_6177:HG3_10X_allpass_2260:HG2_PB_assemblyticsfalcon_3004:HG2_PB_assemblyticsPBcR_2919:HG2_PB_SVrefine2PBcRplusDovetail_1277:HG2_PB_SVrefine2Falcon1plusDovetail_1338:HG2_Ill_svaba_14244:HG2_Ill_manta_3223:HG2_Ill_breakscan11_1647:HG2_Ill_SpiralSDKrefine_1926:HG2_Ill_MetaSV_589:HG2_Ill_GATKHC_18356:HG2_Ill_GATKHCSBGrefine_7706:HG2_Ill_Cortex_964:HG2_CG_vcfBeta_6491:HG2_10X_allpass_1863:HG2_10X_SVrefine210Xhap12_8005:HG3_Ill_Spiral_11930:HG2_PB_pbsv_11414:HG4_PB_pbsv_11419;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8005:HG2_10X_allpass_1863:HG2_CG_vcfBeta_6491:HG2_Ill_Cortex_964:HG2_Ill_GATKHCSBGrefine_7706:HG2_Ill_GATKHC_18356:HG2_Ill_MetaSV_589:HG2_Ill_SpiralSDKrefine_1926:HG2_Ill_breakscan11_1647:HG2_Ill_manta_3223:HG2_Ill_svaba_14244:HG2_PB_SVrefine2Falcon1plusDovetail_1338:HG2_PB_SVrefine2PBcRplusDovetail_1277:HG2_PB_assemblyticsPBcR_2919:HG2_PB_assemblyticsfalcon_3004:HG3_10X_allpass_2260:HG3_CG_vcfBeta_6177:HG3_Ill_Cortex_428:HG3_Ill_GATKHCSBGrefine_7612:HG3_Ill_GATKHC_18253:HG3_Ill_MetaSV_571:HG3_Ill_SVrefine2DISCOVARDovetail_8379:HG3_Ill_manta_2625:HG3_Ill_svaba_14406:HG4_10X_allpass_2176:HG4_CG_vcfBeta_7270:HG4_Ill_Cortex_413:HG4_Ill_GATKHCSBGrefine_7908:HG4_Ill_MetaSV_608:HG4_Ill_SVrefine2DISCOVARDovetail_8168:HG4_Ill_manta_2734:HG4_Ill_svaba_14304;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0995851;ClusterMaxSizeDiff=0.0995851;ClusterMaxEditDist=0.108787;PBcalls=9;Illcalls=22;TenXcalls=4;CGcalls=3;PBexactcalls=4;Illexactcalls=21;TenXexactcalls=4;CGexactcalls=3;HG2count=18;HG3count=11;HG4count=9;NumTechs=4;NumTechsExact=4;SVLEN=-120;DistBack=12971;DistForward=89650;DistMin=12971;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=10:73256582-73256702;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:32:0|1:22:1:1:27:1|0:0:18:26:0:0/1:32:16:./.:.:.:.:.:.
chr10	73511075	HG4_Ill_SVrefine2DISCOVARDovetail_8169	CGGGGCCCCTCTGCCCCTCACCCTCAACCCCACCCCGTGAGGCCGTGGAACTCTTCAGGGAGGTGAATG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1515:HG3_PB_pbsv_11136:HG4_PB_pbsv_11421:HG2_PB_pbsv_11416:HG4_PB_SVrefine2Falcon1Dovetail_6924:HG4_Ill_SVrefine2DISCOVARDovetail_8169:HG2_PB_SVrefine2PBcRplusDovetail_1279:HG2_PB_SVrefine2Falcon2Bionano_5477;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1515:HG4_PB_SVrefine2Falcon1Dovetail_6924:HG4_Ill_SVrefine2DISCOVARDovetail_8169:HG2_PB_SVrefine2PBcRplusDovetail_1279:HG2_PB_SVrefine2Falcon2Bionano_5477;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0597015;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-68;DistBack=0;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=198;REFWIDENED=10:73511076-73511341;PctSeqSimilarity=0.9922;PctSizeSimilarity=1;PctRecOverlap=0.8116;SizeDiff=0;StartDistance=-13;EndDistance=-13;GTMatch=0;TruScore=93;MatchId=442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:23:./.:14:5:7:11:./.:5:1:4:0:0/1:14:4:./.:.:.:.:.:.
chr10	73824517	HG4_Ill_SVrefine2DISCOVARDovetail_8172	CTTGCTCTGTCACCCAGGCTGGAGTGCATTGGCGCGATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCCTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCATAATCTGCCCGCCTCAGCCCCGCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCAGCCTTATTTTATTTTTTGAGATAAATAAAATAAATTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8011:HG3_PB_HySA_17228:HG2_PB_HySA_20658:HG4_PB_HySA_16643:HG4_PB_pbsv_11424:HG2_PB_pbsv_11419:HG3_PB_pbsv_11139:HG4_Ill_scalpel_10515:HG4_Ill_GATKHCSBGrefine_7911:HG4_10X_allpass_2177:HG3_Ill_scalpel_10967:HG3_Ill_GATKHCSBGrefine_7615:HG3_10X_allpass_2261:HG2_Ill_scalpel_10810:HG2_Ill_GATKHCSBGrefine_7708:HG3_Ill_MetaSV_572:HG4_PB_SVrefine2PBcRDovetail_5712:HG4_PB_SVrefine2Falcon1Dovetail_6927:HG4_Ill_SVrefine2DISCOVARDovetail_8172:HG3_PB_SVrefine2PBcRDovetail_5339:HG3_PB_SVrefine2Falcon1Dovetail_6881:HG3_Ill_SVrefine2DISCOVARDovetail_8382:HG2_PB_SVrefine2PBcRplusDovetail_1282:HG2_PB_SVrefine2Falcon2Bionano_5479:HG2_PB_SVrefine2Falcon1plusDovetail_1342:HG2_Ill_SVrefine2DISCOVARplusDovetail_1517;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8011:HG4_PB_SVrefine2PBcRDovetail_5712:HG4_PB_SVrefine2Falcon1Dovetail_6927:HG4_Ill_SVrefine2DISCOVARDovetail_8172:HG3_PB_SVrefine2PBcRDovetail_5339:HG3_PB_SVrefine2Falcon1Dovetail_6881:HG3_Ill_SVrefine2DISCOVARDovetail_8382:HG2_PB_SVrefine2PBcRplusDovetail_1282:HG2_PB_SVrefine2Falcon2Bionano_5479:HG2_PB_SVrefine2Falcon1plusDovetail_1342:HG2_Ill_SVrefine2DISCOVARplusDovetail_1517;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00655738;ClusterMaxSizeDiff=0.00655738;ClusterMaxEditDist=0.0623974;PBcalls=13;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-304;DistBack=26713;DistForward=-166;DistMin=-166;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=268;REFWIDENED=10:73824518-73825089;PctSeqSimilarity=0.9357;PctSizeSimilarity=1;PctRecOverlap=0.5443;SizeDiff=0;StartDistance=-139;EndDistance=-139;GTMatch=0;TruScore=82;MatchId=443.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:3:42:./.:0:7:0:3:./.:6:1:4:0:0/1:29:14:./.:17:2:.:.:.
chr10	74798371	HG3_Ill_scalpel_10970	TTTTATTTGCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGAGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_793:HG2_PB_assemblyticsfalcon_3016:HG2_PB_assemblyticsPBcR_2933:HG4_PB_assemblyticsfalcon_2911:HG3_PB_assemblyticsfalcon_2998:HG4_Ill_Krunchall_15911:HG3_Ill_Krunchall_15325:HG2_Ill_Krunchall_15632:HG3_PB_HySA_17233:HG2_PB_HySA_20663:HG4_PB_pbsv_11427:HG4_PB_SVrefine2PBcRDovetail_5715:HG4_PB_SVrefine2Falcon1Dovetail_6930:HG4_PB_HySA_16651:HG4_Ill_manta_2736:HG4_Ill_SVrefine2DISCOVARDovetail_8176:HG4_Ill_MetaSV_611:HG4_Ill_GATKHCSBGrefine_7914:HG4_10X_allpass_2178:HG3_PB_pbsv_11141:HG3_PB_SVrefine2PBcRDovetail_5342:HG3_PB_SVrefine2Falcon1Dovetail_6884:HG3_Ill_scalpel_10970:HG3_Ill_manta_2627:HG3_Ill_SVrefine2DISCOVARDovetail_8386:HG3_Ill_GATKHCSBGrefine_7616:HG3_10X_allpass_2262:HG2_PB_pbsv_11421:HG2_PB_SVrefine2PBcRplusDovetail_1284:HG2_PB_SVrefine2Falcon2Bionano_5481:HG2_PB_SVrefine2Falcon1plusDovetail_1344:HG2_Ill_scalpel_10812:HG2_Ill_manta_3225:HG2_Ill_SVrefine2DISCOVARplusDovetail_1520:HG2_Ill_GATKHCSBGrefine_7709:HG2_10X_SVrefine210Xhap12_8016:HG2_Ill_breakscan11_1648:HG4_Ill_Spiral_926:HG3_Ill_Spiral_11940:HG2_Ill_tnscope_1279;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8016:HG2_Ill_GATKHCSBGrefine_7709:HG2_Ill_SVrefine2DISCOVARplusDovetail_1520:HG2_Ill_manta_3225:HG2_Ill_scalpel_10812:HG2_PB_SVrefine2Falcon1plusDovetail_1344:HG2_PB_SVrefine2Falcon2Bionano_5481:HG2_PB_SVrefine2PBcRplusDovetail_1284:HG2_PB_pbsv_11421:HG3_10X_allpass_2262:HG3_Ill_GATKHCSBGrefine_7616:HG3_Ill_SVrefine2DISCOVARDovetail_8386:HG3_Ill_manta_2627:HG3_Ill_scalpel_10970:HG3_PB_SVrefine2Falcon1Dovetail_6884:HG3_PB_SVrefine2PBcRDovetail_5342:HG3_PB_pbsv_11141:HG4_10X_allpass_2178:HG4_Ill_GATKHCSBGrefine_7914:HG4_Ill_MetaSV_611:HG4_Ill_SVrefine2DISCOVARDovetail_8176:HG4_Ill_manta_2736:HG4_PB_HySA_16651:HG4_PB_SVrefine2Falcon1Dovetail_6930:HG4_PB_SVrefine2PBcRDovetail_5715;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0885246;ClusterMaxSizeDiff=0.0885246;ClusterMaxEditDist=0.0885246;PBcalls=17;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=-406;DistForward=-299;DistMin=-406;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=10:74798372-74798697;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=444.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:16:0:12:./.:0:0:0:0:1/1:0:62:0/1:2:14:.:.:.
chr10	74842608	HG2_PB_SVrefine2PBcRplusDovetail_1285	TTATGGTGTCTCACTTCTATTTATTCTACCTTCATTCAGAAAGCAGCTTGCAAAGAGAATCATTATAGAACATTTAAGAGTCAAGTATCCCAAAAGACATTATGACTTTATCAAAAATTATAAAATATAAATGCCTCCTGTTCTAAATATTCAAACAAGCTTGAAAAAGAAATTAATGGGTCAAAATGGATGCAATCTCCTTTAAAAGAAAGACTAATCTCAGAT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_11428:HG4_Ill_GATKHCSBGrefine_7915:HG3_Ill_GATKHCSBGrefine_7617:HG2_Ill_GATKHCSBGrefine_7710:HG2_PB_assemblyticsfalcon_3017:HG2_PB_assemblyticsPBcR_2934:HG3_PB_assemblyticsfalcon_2999:HG2_Ill_SpiralSDKrefine_1934:HG4_PB_SVrefine2Falcon1Dovetail_6931:HG4_Ill_manta_2737:HG3_Ill_manta_2628:HG2_Ill_manta_3226:HG2_Ill_SVrefine2DISCOVARplusDovetail_1522:HG2_Ill_breakscan11_1649:HG4_Ill_Spiral_927:HG4_Ill_SVrefine2DISCOVARDovetail_8179:HG3_PB_SVrefine2PBcRDovetail_5343:HG3_PB_SVrefine2Falcon1Dovetail_6885:HG3_Ill_Spiral_11941:HG3_Ill_SVrefine2DISCOVARDovetail_8387:HG2_PB_SVrefine2PBcRplusDovetail_1285:HG2_PB_SVrefine2Falcon2Bionano_5482:HG2_PB_SVrefine2Falcon1plusDovetail_1345:HG2_Ill_Spiral_794:HG2_Ill_SVrefine2DISCOVARplusDovetail_1521:HG2_10X_SVrefine210Xhap12_8017:HG4_Ill_svaba_14317:HG4_Ill_scalpel_10520:HG4_10X_allpass_2179:HG3_Ill_svaba_14418:HG3_Ill_scalpel_10971:HG3_10X_allpass_2263:HG2_Ill_svaba_14256:HG2_Ill_scalpel_10813:HG4_PB_assemblyticsfalcon_2912:HG2_Ill_MetaSV_593:HG4_Ill_MetaSV_612:HG3_PB_HySA_17234:HG3_Ill_MetaSV_576:HG4_Ill_Krunchall_15912:HG2_PB_pbsv_11422:HG3_PB_pbsv_11142;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8017:HG2_Ill_SVrefine2DISCOVARplusDovetail_1521:HG2_Ill_Spiral_794:HG2_PB_SVrefine2Falcon1plusDovetail_1345:HG2_PB_SVrefine2Falcon2Bionano_5482:HG2_PB_SVrefine2PBcRplusDovetail_1285:HG3_Ill_SVrefine2DISCOVARDovetail_8387:HG3_Ill_Spiral_11941:HG3_PB_SVrefine2Falcon1Dovetail_6885:HG3_PB_SVrefine2PBcRDovetail_5343:HG4_Ill_SVrefine2DISCOVARDovetail_8179:HG4_Ill_Spiral_927;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0452489;ClusterMaxSizeDiff=0.0452489;ClusterMaxEditDist=0.0456621;PBcalls=14;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-224;DistBack=-226;DistForward=19167;DistMin=-226;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=10:74842609-74842836;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=0.9956;SizeDiff=0;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=445.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:33:./.:0:5:0:2:./.:0:0:0:1:1/1:0:42:./.:.:.:.:.:.
chr10	78255572	HG2_Ill_GATKHCSBGrefine_7714	TTTCAGTATATAGAAAATGCAATTGATTTGTTTGTATTAATCTTGTGTCCTGACACCTTATTGAACTTGCTTATTAATTTCAGGAGTTCTTTTATAGACTCCTTGAAGTGTTTTATATAGACAATTATGCTGTCTTGTAACAGAGACTTTTTTTTTCTTTTCCAGTTTACCTGCCTTTTATTTTACTTATTTACTTTTTAACATATTGCCTTTCAAGACTTGTTAGTTGGGATAAAAACAGCCTTAATCTACAGCTAATTTTGCCCCCACTATATAGAGCCAATGCCTTTCTGGGTCTTGTACCCAGTGCACCATGGTTTACTAGATTTTCCACTCTAGTTGGTGGGAACATGAACTATCCCAGCTCTGTGTAATGTCTGAAGATTGTTTCCTCTGGTCCTTTCAGGTAGTTTTCTTCTAGCTCTTTTCTAAAAACTCATGTAGTTGCCTCCCACATATCCCCTGACTAGTATTCAGCTGAAGACTTGCAGGTAACTCTCTGCAACTTTCCAGAGCTTTTTTGATACAGCTCTATCTGCTGCAGTAATCTGCCTATTGAGATCTAGTCATCTTACCCTCCCAGCTCCATCTCAGCAAACTGAAGCAATGCTTGAAAATACCTCATTTGTTTTCCCTCTATTAGGACACACTGTCCTACGTTGCTCTATATCCAATGTCTTTCGTATATTTTGTTCAGTATTTTAGTTGCTTCAGGTGGGTGGAGGGTGGGTATGAAAGTGATTCCTGTTAGTTTATCTGGTTGGAATTGAAAGTATCATAAAACTCTATGTTGACTCAGTGTGTTTTTGAAGCTTATTGGGTCTTGATTATTACATTTCAAACTCTACTATCTGTAAGCAAAAGAGACATAGGCCAAGTTATCCTTGTAAAGAACTCATAAGAATTTCCTGACTTACCTGGCTGATGCTTCCTTTGGGGACATTGCCTTCATGATCATATGGGTGTTGGAGTGTTTGTCATGCCAAAGAGAATCTGCATGTGTGACTAATAAGTCAGCATTTCAAGAGGCCTGGCTATACTCTGCTTAAAAGTGAAAAAGCACTGGATTGGCAGGCATAACAAGGAGAAAGTGGCATTGATATGGTAATAGTGACTTTTTAATGGTCTAAGGAAAGATTCCCTCTATTCTTTAACTGTGCATTGGTGGTAGGGTGTTGTGTAGGTTTCTTGTCTGCCAAGGCAATGAACAGATACATTATGGTCACTTTTGTGGATTATAATAGGGAAAATGATGATTCGAAGGAAAGTTAAAAGGTATTTAATAATGAGAATTGTATTAGCTTTCAAATATCTGTTTTCCCTTCACTTACTTCCTTGTTATCTCTTCACTGGGAGATGTGCTTCCATGGCTTTCATCTTTTTTTTCCCCTCTTTTAAAAGATATTTCAAACTTTCTTTTCATACATTTCTCTTATATATTTTAGGCAAGTAGAAGAAACCCAATGTTGTCTGCATTTGTGTAGTTTATGTGTGCCCAGGCCTATATGACTAGTGTTTTGATAACACAGAATCATGATCTGCTTTGACATTCCAAAATTATGGAGGAGAGAAAGTACCACTCTTTGCACCCTTGTTTTCTTGTAGGACCCTTAAAGACTAATATTAAAACATTTGCCCTTCTCAAGACAATTCAACACCCCCTCTTCTTCAGGTAATGTCTGCCACCATGCCCACCACTTCAACTCAAGTATACCCCACTGACTCTATTCAGTAGAGAGATGGCAAAAGTGTGAAATTGTATTCTCTTCCCCCTATTTCAGTTCTCTTTTTGAAGAGGAAACCAACCAACCAAGTTTATATCTTGAAATTACTATCTGTGGGATATTTGCAGCTGAGACTAAGTCCTAGTGCTTTCTTAATAAAAGCTATGCATGTAAATAGGGTCAGCTTTTGGGCTGACATTGCATTTGAATTAAAATCTGGCATCTCCACACCATTGACAAATCTGACAGCTGGAGCAGCAGTCACCTCATCATATCTCTCAGTTGTGTCTTTCCTGGTTTTTGGCATCCTTCCTGTCTAAATTTTTATCAGATGAGCACTTTTCCTTGGCAAGTACTTTAAATACCTTCAACTTGTTTTATCTCTGAACTGTAACCCTTTGCCCTCAGATGTCATATCTCACATGTATGACTGGAGGATATTCAGAACAAATTAGTTAAGAATGCAACACCAGAGTGCAATTTCATTTGGTCTTCTCCCTGCCCCATCCTCTTCCCAAATATTGGAGCTTCCTGTTGAAGAGACCTTTATGGACATTGATTAATTTCATGGAAGCTACTTAATGGTCTTGCAAATTGGAACAGTTGTAAGTTTTGATTGTGACACTGCAGGGCTAACTCCACCTGTGCTAAGCATTCAGCATTGTTTTCTTTGGCTTTGCTTCATTCACGATAATCAAGGACTTGGGTTCATTACCAGCATTAGCAAGCCTCAAAGGCCTCTCATAAATCCAAGCCAAACACTGTGTTAGGAGGTTCCTTAGATTAATGGCAGCCCTGGTTCTCTGAGGCTGTGTTGAGATCTGAGAGAAGGTAATGTTCACTCGGCTTCAGCATTTCTACTTGTAGTTCAAAGCCAAACCTGGAGGTACAGGATGATCTGCAGGCAACAAGAGATAGAATGTGGGCCTGCAAAAGGTACCACCTGTATACATGATGAGCTCTTCCTGCCTGGCACGCAAAGAACTTTAGAGTTTTCCTCAAGCCTTTTCCTATGAAAACTCTCAGGTTTTGTCAGCTGGGTCAATCCATTGCCTTTCCAATACACCTGGAGCATTTCTTCCTTGATGAATTAAGGGCTGAACAAGGATGCATGTCAGGGGTGAAACCCTTTGAAGAGTGCAAAAATAAAAATTGGTTGTTTAGTAAGTAGAAAGATAAATCAAAACCAATCTATAAAAGTTAGATTCATATCTCTTTTCAGGGTCACAATTTGCCTTTGTTTTCTAGCATCTTCATCGGTGCTTGCAACTGAAATGGGTCTTCTTTTGACTCTTGGTCTTTCCTTAGTTAAGGGTGAGGGAGACTCTTTGGTTCTCCAGCGGACAAAAGAAGACAGCTAACAAATAAGTCACTCTTTCTTCCATAGTCTATTTATAAGCCTTACAAGTTAATGCTGGAAAGGCCAATGAGAAGAAAAATAAAACAACAGTAGTAGTAGTAGTAATAAGCATGATCATCATCATCATCATTGGCCGCATTTTTAGAGAATTTGCTATGTACCAGGCACTGTTGAAAAGAAAAATAACTTTACTGAGATATAATACACATTCAATAAAATTCATTCACTTGAAGTATAACAGTTCAGAAGTTTTTAATATATTTACAGAGTTGTGCAACTGTCACCACTATCTAATCTTAGAACATTTTTGTCACCCCCATAAGCTGCCCTATATCATGAGCTGTCACTCTCCATTCCTCTTGAGCCCCCAACCCCTGTCAAGTACTAATCTACTTTCTCTATATATGTATTTGCGCATTCTGGACATTTCACATAAATGCAATCATATAGTGTGATCTTTTGTGCCTGGTGTCTTTCACGTAGCATGTTTTCAAGGTTCATCATATTATAGCCCATGTCAGTACTTCAGTTCTTTTTAGAGATGAATAATATTCTATTGTCTAGGTACAGACATGCCACATTTTGTTAATTACCATCAGCTGATGAATATTTTGACTAGAATTCAGGCATTATACTTTTATTTTTAACCTTTCATTTTGAATTAATTTCACACTGTTGAAAAATTAGTAAAATTATTTCTTATACACCCTTCTCCCAGATTTCCCAGTTATTAACAGCTTATATAATCACAGTACAATGATCAAACATCGATACAATACTATTATCTCATCTAAAGACCTTATTCAAATTTCTCCCTCTGTTGTACTAACATTCTTTTTCTAGCACAGGATCCAACCCAGGATCACATATTGCATTTAATTATCATGTCTCCTTAGTCTTTTTAAATCTGGAACATTTCATCATTTTTTAACTTTGAGACTTTACATTTTTAACTTTAAATATATATTATTTTTATGTTATATATTTTTTAGAAATAGGGTCTCACTCTGTAACCTAGACTGAGGGCACTGGCATGATTGTAGCTTACTACAGCCCCAAACTCCTTGGTTCAAGTGATCCTCCTGCCTCAGCCTTCTGAGTAGCTAGGACTACAGGCATGTGATACTGTACCTGGCTAATATTTAAGATTTTTTTGTTTAGAGACAGGATTTTGTTTTGTTGCCAAGGCTGATATCAAACTCCTGGCTTTAAGCAATCCTTCTGTCCCAGCCTCCCAAAATGCTGGAATTACAAGTATCAGCCACTGGGCCTGGCCTTAGTTTTATATTTTAAAAGCTAAGCACGCTTACTGCAGAAGAATATATAAAACATGTAAGACAGAATGAATAGAAATCACCCTTATTTCATTACCATTAGATGGTCACTATTGACAATTTGATCTATTTCTGTCCTTCTATTCATATTATTGAAAATATAATTTATATTCTCTTTTAAACCAGCATTATATCATGACCATTTTCCATGCATTAAGAACTCTTAAAAAACATAATAGTTTCATAATGGTCCATCTTGTGGTTAATACATACTGCCCTCCAGCATATCTGTGATATTAAACATTTAGGTTTTCTCTGGTGAAACAAAATGAAATTAGTCAATGTGTATGAACTGTTTTAAGGTTACTAATTTGTATTGCTAAAATGACTTCCAAAATGATGATATCAATATAAATTCCCTTAGGACTCTGTGAAAGCCTGTTTCACCACACCATCCTCAGCACTGGGGAAATTCATCTTTTTCCAATGTTTGAAAAATTAAATTCCACTGTGCCTTTAGTTTGCATTTCCTTATTAGTGATATTAACTTTTAAAAACAGTTATCAATTTGTGTATTTTCTTTGGTGAATTGTCTCTTTGTATGCAAAATATAATTTTTTAATTATAAAAGAAATCAAGGAAAAGGTATGCTTTACACACTATGCTTATTTTCTGCCTTTTTTTAAAAAAAAAATAAAAGTAACTTCAACATTTATTTTAGATTCAGAGGGGTACATGTGCAGGCTTGTTACATGGGTCTATTGCGTGATGCTGAGGTTTGGGATATGGATGATCCCATCATGTAGGTAGTGAGCATAGTACCTAAGAGGTAGTTTTTCAGCCCACACTCCCTTTCTCCTTCTCCTCTCTAGTAGTCTCCAGTGTTGATCGTTGTTTCCATTTGTATGTCTATGTGTACTCAGTTCTTAGCTCCCACTTATAAGTGAAAGCATGTGGTATTTGGTTTTCTGGTCCTGCATTATTTTGTTTAGGATTAGCCTGCCGCTGTATCCATGTTGCTGCAAATGACATTTCATTATTTGTATAGCTGTGCAGCATTCTAAGGTGAACATATACCACAGTTTCCTTA	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_578:HG4_Ill_Krunchall_15933:HG3_Ill_Krunchall_15343:HG2_Ill_Krunchall_15654:HG4_10X_allpass_2180:HG4_PB_assemblyticsfalcon_2933:HG2_PB_assemblyticsPBcR_2957:HG2_PB_assemblyticsfalcon_3042:HG3_10X_allpass_2264:HG2_10X_allpass_1864:HG4_PB_pbsv_11433:HG4_PB_SVrefine2PBcRDovetail_5723:HG4_PB_SVrefine2Falcon1Dovetail_6934:HG4_Ill_SVrefine2DISCOVARDovetail_8193:HG4_Ill_MetaSV_616:HG4_Ill_GATKHCSBGrefine_7922:HG3_PB_pbsv_11147:HG3_PB_assemblyticsfalcon_3015:HG3_PB_SVrefine2PBcRDovetail_5348:HG3_PB_SVrefine2Falcon1Dovetail_6889:HG3_Ill_SVrefine2DISCOVARDovetail_8400:HG3_Ill_GATKHCSBGrefine_7620:HG2_PB_SVrefine2PBcRplusDovetail_1289:HG2_PB_SVrefine2PB10Xhap12_8298:HG2_PB_SVrefine2Falcon2Bionano_5485:HG2_PB_SVrefine2Falcon1plusDovetail_1349:HG2_Ill_SpiralSDKrefine_1951:HG2_Ill_SVrefine2DISCOVARplusDovetail_1538:HG2_Ill_MetaSV_595:HG2_Ill_GATKHCSBGrefine_7714:HG2_10X_SVrefine210Xhap12_8025:HG2_Ill_tnscope_1282:HG2_Ill_breakscan11_1650:HG2_PB_pbsv_11428;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8025:HG2_Ill_GATKHCSBGrefine_7714:HG2_Ill_MetaSV_595:HG2_Ill_SVrefine2DISCOVARplusDovetail_1538:HG2_Ill_SpiralSDKrefine_1951:HG2_PB_SVrefine2Falcon1plusDovetail_1349:HG2_PB_SVrefine2Falcon2Bionano_5485:HG2_PB_SVrefine2PB10Xhap12_8298:HG2_PB_SVrefine2PBcRplusDovetail_1289:HG3_Ill_GATKHCSBGrefine_7620:HG3_Ill_SVrefine2DISCOVARDovetail_8400:HG3_PB_SVrefine2Falcon1Dovetail_6889:HG3_PB_SVrefine2PBcRDovetail_5348:HG3_PB_assemblyticsfalcon_3015:HG3_PB_pbsv_11147:HG4_Ill_GATKHCSBGrefine_7922:HG4_Ill_MetaSV_616:HG4_Ill_SVrefine2DISCOVARDovetail_8193:HG4_PB_SVrefine2Falcon1Dovetail_6934:HG4_PB_SVrefine2PBcRDovetail_5723;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0173215;ClusterMaxSizeDiff=0.0173215;ClusterMaxEditDist=0.0173215;PBcalls=15;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-5447;DistBack=6857;DistForward=-5439;DistMin=-5439;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=10:78255573-78261025;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=446.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:78:./.:1:16:0:3:1/1:0:16:0:37:1/1:0:37:1/1:0:423:5644:.:.
chr10	78346589	HG2_PB_SVrefine2Falcon2Bionano_5486	TAAAAATACTTAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTTATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGTGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGGAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGCAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCGATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGAAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGGAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTGCATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAGACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAGTAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAAACAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACTGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGAAGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATTGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCACCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGCTTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCACGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTCAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGACCAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGCTATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGACATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATAAATAAAATAAAAAATAATGCTGTAAAGAGAGAGGAACAGAGACAGGGAGAGTAAATTTAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1651:HG2_PB_assemblyticsfalcon_3043:HG4_10X_allpass_2181:HG4_PB_assemblyticsfalcon_2934:HG2_PB_assemblyticsPBcR_2959:HG2_Ill_Krunchall_15656:HG2_10X_allpass_1865:HG2_PB_HySA_20691:HG2_Ill_tnscope_1283:HG4_PB_pbsv_11434:HG4_PB_SVrefine2Falcon1Dovetail_6935:HG4_Ill_SVrefine2DISCOVARDovetail_8194:HG4_Ill_MetaSV_617:HG4_Ill_GATKHCSBGrefine_7923:HG2_PB_pbsv_11429:HG2_PB_SVrefine2PBcRplusDovetail_1290:HG2_PB_SVrefine2PB10Xhap12_8299:HG2_PB_SVrefine2Falcon2Bionano_5486:HG2_PB_SVrefine2Falcon1plusDovetail_1350:HG2_Ill_SVrefine2DISCOVARplusDovetail_1539:HG2_Ill_MetaSV_596:HG2_Ill_GATKHCSBGrefine_7715:HG2_10X_SVrefine210Xhap12_8026:HG4_PB_SVrefine2PBcRDovetail_5724;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8026:HG2_Ill_GATKHCSBGrefine_7715:HG2_Ill_MetaSV_596:HG2_Ill_SVrefine2DISCOVARplusDovetail_1539:HG2_PB_SVrefine2Falcon1plusDovetail_1350:HG2_PB_SVrefine2Falcon2Bionano_5486:HG2_PB_SVrefine2PB10Xhap12_8299:HG2_PB_SVrefine2PBcRplusDovetail_1290:HG2_PB_pbsv_11429:HG4_Ill_GATKHCSBGrefine_7923:HG4_Ill_MetaSV_617:HG4_Ill_SVrefine2DISCOVARDovetail_8194:HG4_PB_SVrefine2Falcon1Dovetail_6935:HG4_PB_pbsv_11434;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00582096;ClusterMaxSizeDiff=0.00582096;ClusterMaxEditDist=0.00582096;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-4988;DistBack=770;DistForward=-4973;DistMin=-4973;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=10:78346590-78351592;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:54:0|1:41:0:0:29:0|1:58:0:0:24:0/1:59:25:0/1:347:167:5025:.:.
chr10	78578903	HG4_PB_SVrefine2Falcon1Dovetail_6938	GTCCTTCGCCCTTAGCGGCAAGTCCCGCTTTCCTGGGGCCGGGGCAAGTACCCCTCAACCCCTTCTCCTTCACCCTCAGCGGCAAGTCCCGCTTTCCTGGGGCCGGGGCAAGTACCCCTCAACCCCTTC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1543:HG3_PB_assemblyticsfalcon_3018:HG3_PB_SVrefine2Falcon1Dovetail_6891:HG2_PB_SVrefine2PBcRplusDovetail_1292:HG2_PB_assemblyticsPBcR_2963:HG4_PB_SVrefine2PBcRDovetail_5726:HG2_PB_pbsv_11432:HG4_PB_pbsv_11436:HG4_PB_SVrefine2Falcon1Dovetail_6938:HG2_PB_SVrefine2PB10Xhap12_8300;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1543:HG4_PB_SVrefine2Falcon1Dovetail_6938:HG2_PB_SVrefine2PB10Xhap12_8300;NumExactMatchSVs=3;ClusterMaxShiftDist=0.145749;ClusterMaxSizeDiff=0.145749;ClusterMaxEditDist=0.17004;PBcalls=9;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-128;DistBack=41952;DistForward=-129;DistMin=-129;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=358;REFWIDENED=10:78578904-78579389;PctSeqSimilarity=0.9831;PctSizeSimilarity=0.9922;PctRecOverlap=0.7054;SizeDiff=1;StartDistance=-38;EndDistance=-37;GTMatch=0;TruScore=89;MatchId=448.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:23:0|1:13:0:1:22:0/0:10:0:9:0:0/0:15:0:./.:.:.:.:.:.
chr10	81188158	HG2_Ill_150bpfermikitraw_14430	TGCAAGATAAATTTCAGTTTTGCAAGATAAATTTCAGTTTTGCAAGATAAATTTCAGTTTTGCAAGATAAATTTCAG	T	20	PASS	ClusterIDs=HG2_Ill_svaba_14286:HG4_Ill_svaba_14350:HG4_Ill_scalpel_10556:HG4_Ill_manta_2742:HG4_Ill_Krunchall_15955:HG4_Ill_GATKHC_18440:HG4_Ill_GATKHCSBGrefine_7930:HG4_Ill_250bpfermikitraw_15212:HG4_Ill_150bpfermikitraw_14595:HG2_Ill_svaba_14287:HG2_Ill_scalpel_10849:HG2_Ill_manta_3232:HG2_Ill_SpiralSDKrefine_1967:HG2_Ill_Krunchall_15685:HG2_Ill_GATKHC_18419:HG2_Ill_GATKHCSBGrefine_7725:HG2_Ill_250bpfermikitraw_15333:HG2_Ill_150bpfermikitraw_14430:HG2_PB_pbsv_11439:HG4_CG_vcfBeta_7304:HG4_PB_HySA_16691:HG4_Ill_svaba_14349:HG4_Ill_Krunchall_15954:HG4_Ill_GATKHC_18439:HG4_Ill_GATKHCSBGrefine_7929:HG4_Ill_250bpfermikitraw_15211:HG4_Ill_150bpfermikitraw_14594:HG4_10X_allpass_2183;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14430:HG2_Ill_250bpfermikitraw_15333:HG2_Ill_GATKHCSBGrefine_7725:HG2_Ill_GATKHC_18419:HG2_Ill_Krunchall_15685:HG2_Ill_SpiralSDKrefine_1967:HG2_Ill_manta_3232:HG2_Ill_scalpel_10849:HG2_Ill_svaba_14287:HG4_Ill_150bpfermikitraw_14595:HG4_Ill_250bpfermikitraw_15212:HG4_Ill_GATKHCSBGrefine_7930:HG4_Ill_GATKHC_18440:HG4_Ill_Krunchall_15955:HG4_Ill_manta_2742:HG4_Ill_scalpel_10556:HG4_Ill_svaba_14350;NumExactMatchSVs=17;ClusterMaxShiftDist=0.123457;ClusterMaxSizeDiff=0.123457;ClusterMaxEditDist=0.123457;PBcalls=2;Illcalls=24;TenXcalls=1;CGcalls=1;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=17;NumTechs=4;NumTechsExact=1;SVLEN=-76;DistBack=10;DistForward=65007;DistMin=10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=10:81188157-81188235;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:26:./.:17:17:28:7:0|1:32:0:0:29:0/1:36:31:./.:.:.:.:.:.
chr10	81695836	HG4_10X_allpass_2184	TCCTGACAGCATGATCCGCCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGTCCACCACCGCGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTTCACCTGACAGGGGTTTCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8034:HG4_PB_HySA_16699:HG2_PB_HySA_20721:HG2_PB_pbsv_11443:HG4_PB_pbsv_11444:HG4_Ill_GATKHCSBGrefine_7935:HG4_10X_allpass_2184:HG2_Ill_scalpel_10856:HG2_Ill_GATKHCSBGrefine_7730:HG2_10X_allpass_1868:HG4_PB_SVrefine2PBcRDovetail_5731:HG2_PB_SVrefine2PB10Xhap12_8303:HG2_PB_SVrefine2Falcon2Bionano_5493;NumClusterSVs=13;ExactMatchIDs=HG2_10X_allpass_1868:HG2_Ill_GATKHCSBGrefine_7730:HG2_Ill_scalpel_10856:HG4_10X_allpass_2184:HG4_Ill_GATKHCSBGrefine_7935;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0192308;ClusterMaxSizeDiff=0.0128205;ClusterMaxEditDist=0.0961538;PBcalls=7;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-155;DistBack=7765;DistForward=42415;DistMin=7765;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=162;REFWIDENED=10:81695694-81696010;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=450.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:38:0|1:46:2:1:31:0|1:21:1:0:13:0/1:20:19:./.:.:.:.:.:.
chr10	82737737	HG2_Ill_scalpel_10863	TGGTGCTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_11161:HG4_10X_allpass_2185:HG2_10X_allpass_1869:HG3_PB_assemblyticsfalcon_3046:HG4_PB_assemblyticsfalcon_2967:HG4_Ill_Krunchall_15968:HG3_Ill_Krunchall_15378:HG2_Ill_Krunchall_15697:HG4_Ill_Spiral_931:HG2_Ill_Spiral_797:HG2_PB_pbsv_11449:HG4_PB_pbsv_11448:HG3_Ill_MetaSV_584:HG2_Ill_tnscope_1286:HG2_Ill_MetaSV_602:HG4_PB_SVrefine2PBcRDovetail_5733:HG4_PB_SVrefine2Falcon1Dovetail_6945:HG4_Ill_scalpel_10570:HG4_Ill_SVrefine2DISCOVARDovetail_8212:HG4_Ill_GATKHCSBGrefine_7938:HG3_PB_SVrefine2Falcon1Dovetail_6897:HG3_Ill_scalpel_11020:HG3_Ill_manta_2634:HG3_Ill_SVrefine2DISCOVARDovetail_8418:HG3_Ill_GATKHCSBGrefine_7633:HG3_10X_allpass_2268:HG2_PB_assemblyticsPBcR_2983:HG2_PB_SVrefine2PBcRplusDovetail_1297:HG2_PB_HySA_20734:HG2_Ill_scalpel_10863:HG2_Ill_manta_3235:HG2_Ill_breakscan11_1653:HG2_Ill_SVrefine2DISCOVARplusDovetail_1556:HG2_Ill_GATKHCSBGrefine_7734:HG2_10X_SVrefine210Xhap12_8035;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8035:HG2_Ill_GATKHCSBGrefine_7734:HG2_Ill_SVrefine2DISCOVARplusDovetail_1556:HG2_Ill_breakscan11_1653:HG2_Ill_manta_3235:HG2_Ill_scalpel_10863:HG2_PB_HySA_20734:HG2_PB_SVrefine2PBcRplusDovetail_1297:HG2_PB_assemblyticsPBcR_2983:HG3_10X_allpass_2268:HG3_Ill_GATKHCSBGrefine_7633:HG3_Ill_SVrefine2DISCOVARDovetail_8418:HG3_Ill_manta_2634:HG3_Ill_scalpel_11020:HG3_PB_SVrefine2Falcon1Dovetail_6897:HG4_Ill_GATKHCSBGrefine_7938:HG4_Ill_SVrefine2DISCOVARDovetail_8212:HG4_Ill_scalpel_10570:HG4_PB_SVrefine2Falcon1Dovetail_6945:HG4_PB_SVrefine2PBcRDovetail_5733;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0861244;ClusterMaxSizeDiff=0.0861244;ClusterMaxEditDist=0.0861244;PBcalls=11;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=67297;DistForward=1539;DistMin=1539;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=10:82737738-82738070;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:40:0|1:27:1:2:41:1|0:0:28:35:0:0/1:37:27:0/1:22:7:.:.:.
chr10	82904657	HG2_Ill_SVrefine2DISCOVARplusDovetail_1557	GAGAAACTGAATTCTCTGTGGACTTTCAGGTTTATGGGGGAGTTTTGGTTGTGTTTCTTGGTTTTATTTCAGACAAATGTGTCTGCCTTTGATTTTTAAATAAAAGCATAAGTGGTCTATATATATGTTCACCTTTTAAATGTAAATGTTTAAAAAGTAAGCATTTATGTGTTTCCATAACTGATATCTGATGCAGACCTCATTCTCTCCCCCTCTTCTACCCTCCTATTTTCCCTCTTTTCATACTCTTGTAT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_11449:HG3_PB_HySA_17297:HG3_Ill_MetaSV_586:HG2_PB_HySA_20735:HG2_Ill_MetaSV_603:HG4_PB_SVrefine2PBcRDovetail_5734:HG4_PB_SVrefine2Falcon1Dovetail_6946:HG4_Ill_scalpel_10572:HG4_Ill_manta_2743:HG4_Ill_SVrefine2DISCOVARDovetail_8213:HG4_Ill_MetaSV_621:HG4_Ill_GATKHCSBGrefine_7939:HG4_10X_allpass_2186:HG3_PB_pbsv_11163:HG3_PB_SVrefine2Falcon1Dovetail_6898:HG3_Ill_scalpel_11024:HG3_Ill_manta_2635:HG3_Ill_SVrefine2DISCOVARDovetail_8420:HG3_Ill_GATKHCSBGrefine_7634:HG3_10X_allpass_2270:HG2_PB_pbsv_11450:HG2_PB_assemblyticsPBcR_2984:HG2_PB_SVrefine2PBcRplusDovetail_1298:HG2_PB_SVrefine2Falcon2Bionano_5494:HG2_PB_SVrefine2Falcon1plusDovetail_1356:HG2_Ill_scalpel_10865:HG2_Ill_manta_3236:HG2_Ill_SpiralSDKrefine_1975:HG2_Ill_SVrefine2DISCOVARplusDovetail_1557:HG2_Ill_GATKHCSBGrefine_7736:HG2_10X_allpass_1870:HG2_10X_SVrefine210Xhap12_8036:HG4_PB_assemblyticsfalcon_2968:HG3_PB_assemblyticsfalcon_3047:HG2_PB_assemblyticsfalcon_3069:HG3_Ill_Krunchall_15381:HG2_Ill_Krunchall_15699;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8036:HG2_10X_allpass_1870:HG2_Ill_GATKHCSBGrefine_7736:HG2_Ill_SVrefine2DISCOVARplusDovetail_1557:HG2_Ill_SpiralSDKrefine_1975:HG2_Ill_manta_3236:HG2_Ill_scalpel_10865:HG2_PB_SVrefine2Falcon1plusDovetail_1356:HG2_PB_SVrefine2Falcon2Bionano_5494:HG2_PB_SVrefine2PBcRplusDovetail_1298:HG2_PB_assemblyticsPBcR_2984:HG2_PB_pbsv_11450:HG3_10X_allpass_2270:HG3_Ill_GATKHCSBGrefine_7634:HG3_Ill_SVrefine2DISCOVARDovetail_8420:HG3_Ill_manta_2635:HG3_Ill_scalpel_11024:HG3_PB_SVrefine2Falcon1Dovetail_6898:HG3_PB_pbsv_11163:HG4_10X_allpass_2186:HG4_Ill_GATKHCSBGrefine_7939:HG4_Ill_MetaSV_621:HG4_Ill_SVrefine2DISCOVARDovetail_8213:HG4_Ill_manta_2743:HG4_Ill_scalpel_10572:HG4_PB_SVrefine2Falcon1Dovetail_6946:HG4_PB_SVrefine2PBcRDovetail_5734;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0118577;ClusterMaxSizeDiff=0.0118343;ClusterMaxEditDist=0.0392927;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-253;DistBack=153902;DistForward=21111;DistMin=21111;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=10:82904658-82904910;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=452.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:62:./.:0:8:0:3:1/1:0:28:0:21:1/1:0:42:./.:.:.:.:.:.
chr10	84237972	HG2_10X_allpass_1871	TTGGCTTGTGTCACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCGGAAAGGTGGGGAAAAGATTGAGAAATCCGA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_605:HG2_PB_assemblyticsPBcR_2994:HG4_Ill_Krunchall_15979:HG3_Ill_Krunchall_15393:HG2_Ill_Krunchall_15710:HG4_PB_assemblyticsfalcon_2974:HG3_PB_assemblyticsfalcon_3055:HG2_PB_assemblyticsfalcon_3076:HG3_PB_pbsv_11171:HG2_PB_HySA_20745:HG4_PB_pbsv_11456:HG4_PB_SVrefine2PBcRDovetail_5738:HG4_PB_SVrefine2Falcon1Dovetail_6949:HG4_Ill_svaba_14377:HG4_Ill_manta_2745:HG4_Ill_SVrefine2DISCOVARDovetail_8223:HG4_Ill_GATKHCSBGrefine_7948:HG4_10X_allpass_2187:HG3_PB_SVrefine2Falcon1Dovetail_6903:HG3_Ill_svaba_14471:HG3_Ill_manta_2640:HG3_Ill_SVrefine2DISCOVARDovetail_8426:HG3_Ill_GATKHCSBGrefine_7639:HG3_10X_allpass_2272:HG2_PB_pbsv_11455:HG2_PB_SVrefine2PBcRplusDovetail_1302:HG2_PB_SVrefine2PB10Xhap12_8305:HG2_PB_SVrefine2Falcon2Bionano_5498:HG2_PB_SVrefine2Falcon1plusDovetail_1360:HG2_Ill_svaba_14315:HG2_Ill_manta_3238:HG2_Ill_SpiralSDKrefine_1984:HG2_Ill_SVrefine2DISCOVARplusDovetail_1564:HG2_Ill_GATKHCSBGrefine_7745:HG2_10X_allpass_1871:HG2_10X_SVrefine210Xhap12_8039:HG2_Ill_breakscan11_1654:HG4_Ill_MetaSV_622:HG3_Ill_MetaSV_591:HG2_Ill_tnscope_1288;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8039:HG2_10X_allpass_1871:HG2_Ill_GATKHCSBGrefine_7745:HG2_Ill_SVrefine2DISCOVARplusDovetail_1564:HG2_Ill_SpiralSDKrefine_1984:HG2_Ill_manta_3238:HG2_Ill_svaba_14315:HG2_PB_SVrefine2Falcon1plusDovetail_1360:HG2_PB_SVrefine2Falcon2Bionano_5498:HG2_PB_SVrefine2PB10Xhap12_8305:HG2_PB_SVrefine2PBcRplusDovetail_1302:HG2_PB_pbsv_11455:HG3_10X_allpass_2272:HG3_Ill_GATKHCSBGrefine_7639:HG3_Ill_SVrefine2DISCOVARDovetail_8426:HG3_Ill_manta_2640:HG3_Ill_svaba_14471:HG3_PB_SVrefine2Falcon1Dovetail_6903:HG4_10X_allpass_2187:HG4_Ill_GATKHCSBGrefine_7948:HG4_Ill_SVrefine2DISCOVARDovetail_8223:HG4_Ill_manta_2745:HG4_Ill_svaba_14377:HG4_PB_SVrefine2Falcon1Dovetail_6949:HG4_PB_SVrefine2PBcRDovetail_5738;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0679712;ClusterMaxSizeDiff=0.0679712;ClusterMaxEditDist=0.0679712;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-493;DistBack=-493;DistForward=12578;DistMin=-493;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=10:84237973-84238482;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:./.:0:1:0:0:1/1:0:15:0:16:1/1:0:37:./.:2:19:.:.:.
chr10	84400756	HG3_PB_SVrefine2Falcon1Dovetail_6905	TCAGTCTGTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_798:HG4_Ill_Krunchall_15982:HG2_Ill_Krunchall_15712:HG3_PB_pbsv_11173:HG2_PB_pbsv_11457:HG4_PB_pbsv_11458:HG4_PB_assemblyticsfalcon_2976:HG3_PB_assemblyticsfalcon_3057:HG3_Ill_MetaSV_592:HG4_PB_SVrefine2Falcon1Dovetail_6951:HG4_Ill_svaba_14379:HG4_Ill_scalpel_10582:HG4_Ill_manta_2746:HG4_Ill_GATKHCSBGrefine_7949:HG4_10X_allpass_2188:HG3_PB_SVrefine2Falcon1Dovetail_6905:HG3_Ill_svaba_14472:HG3_Ill_scalpel_11033:HG3_Ill_manta_2641:HG3_Ill_SVrefine2DISCOVARDovetail_8428:HG3_Ill_GATKHCSBGrefine_7640:HG3_10X_allpass_2273:HG2_PB_SVrefine2Falcon2Bionano_5500:HG2_Ill_svaba_14317:HG2_Ill_scalpel_10875:HG2_Ill_manta_3239:HG2_Ill_SVrefine2DISCOVARplusDovetail_1566:HG2_Ill_GATKHCSBGrefine_7746:HG2_10X_allpass_1872:HG2_10X_SVrefine210Xhap12_8042:HG4_Ill_Spiral_932:HG3_Ill_Spiral_12000:HG2_Ill_breakscan11_1655;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8042:HG2_10X_allpass_1872:HG2_Ill_GATKHCSBGrefine_7746:HG2_Ill_SVrefine2DISCOVARplusDovetail_1566:HG2_Ill_manta_3239:HG2_Ill_scalpel_10875:HG2_Ill_svaba_14317:HG2_PB_SVrefine2Falcon2Bionano_5500:HG3_10X_allpass_2273:HG3_Ill_GATKHCSBGrefine_7640:HG3_Ill_SVrefine2DISCOVARDovetail_8428:HG3_Ill_manta_2641:HG3_Ill_scalpel_11033:HG3_Ill_svaba_14472:HG3_PB_SVrefine2Falcon1Dovetail_6905:HG4_10X_allpass_2188:HG4_Ill_GATKHCSBGrefine_7949:HG4_Ill_manta_2746:HG4_Ill_scalpel_10582:HG4_Ill_svaba_14379:HG4_PB_SVrefine2Falcon1Dovetail_6951;NumExactMatchSVs=21;ClusterMaxShiftDist=0.217544;ClusterMaxSizeDiff=0.217544;ClusterMaxEditDist=0.217544;PBcalls=8;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-149;DistBack=23780;DistForward=66696;DistMin=23780;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=10:84400757-84400921;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=454.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:21:0|1:32:0:1:23:0|1:23:0:0:28:0/1:16:24:./.:.:.:.:.:.
chr10	85375925	HG2_10X_SVrefine210Xhap12_8044	CCCAGAAAACAAGATGGCTTCTGAGAGTAAAGCTAGGATGTAAAACACCAAAGGTGAATTTAATAATCAACATTTTTTTTCAGGGATCGGTCACCTCTATGGTCAAAGTGATAAAGAAGATTTGGGATCCAACCAAGGAAATATAGCAAAGTCCTGCATCATTAACAAAATTAATATATATAAGGGAAGAATAAAACTAGAAGTCCAGATAAAGGGATGT	C	20	PASS	ClusterIDs=HG3_PB_HySA_17309:HG4_Ill_Krunchall_15987:HG2_Ill_Krunchall_15716:HG2_PB_assemblyticsfalcon_3080:HG4_PB_HySA_16715:HG2_PB_assemblyticsPBcR_2996:HG3_PB_pbsv_11174:HG2_PB_HySA_20750:HG4_PB_pbsv_11459:HG4_PB_SVrefine2Falcon1Dovetail_6952:HG4_Ill_svaba_14382:HG4_Ill_manta_2747:HG4_Ill_GATKHCSBGrefine_7950:HG3_Ill_svaba_14476:HG3_Ill_scalpel_11038:HG3_Ill_manta_2642:HG3_Ill_GATKHCSBGrefine_7641:HG3_10X_allpass_2274:HG2_PB_pbsv_11458:HG2_PB_SVrefine2PBcRplusDovetail_1304:HG2_PB_SVrefine2PB10Xhap12_8307:HG2_PB_SVrefine2Falcon1plusDovetail_1362:HG2_Ill_svaba_14321:HG2_Ill_scalpel_10879:HG2_Ill_manta_3240:HG2_Ill_SpiralSDKrefine_1986:HG2_Ill_GATKHCSBGrefine_7747:HG2_10X_allpass_1873:HG2_10X_SVrefine210Xhap12_8044:HG2_Ill_breakscan11_1656:HG3_Ill_MetaSV_593;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8044:HG2_10X_allpass_1873:HG2_Ill_GATKHCSBGrefine_7747:HG2_Ill_SpiralSDKrefine_1986:HG2_Ill_manta_3240:HG2_Ill_scalpel_10879:HG2_Ill_svaba_14321:HG2_PB_SVrefine2Falcon1plusDovetail_1362:HG2_PB_SVrefine2PB10Xhap12_8307:HG2_PB_SVrefine2PBcRplusDovetail_1304:HG2_PB_pbsv_11458:HG3_10X_allpass_2274:HG3_Ill_GATKHCSBGrefine_7641:HG3_Ill_manta_2642:HG3_Ill_scalpel_11038:HG3_Ill_svaba_14476:HG4_Ill_GATKHCSBGrefine_7950:HG4_Ill_manta_2747:HG4_Ill_svaba_14382:HG4_PB_SVrefine2Falcon1Dovetail_6952:HG4_PB_pbsv_11459;NumExactMatchSVs=21;ClusterMaxShiftDist=0.237975;ClusterMaxSizeDiff=0.237975;ClusterMaxEditDist=0.237975;PBcalls=12;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-219;DistBack=-246;DistForward=111695;DistMin=-246;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=10:85375926-85376155;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:35:0|1:27:0:0:33:1|0:1:17:47:1:0/1:50:19:./.:.:.:.:.:.
chr10	85522715	HG3_Ill_SVrefine2DISCOVARDovetail_8432	CAAATTAAAATACAAGCATACTACAATTTCTACCGAAATATCAAGAAAATTAGTTAGAAATACAAACCAGGTAATTTTGAAATTTATATAAAAGGCCAGATGACCCAGCATAGCCAAAACAGATTATTTCAATAAACAAAACTGATCACCAAACAAAATTAATCACTGAAGAATTTGAACTAAGGAGATACTAATTTCTACAGGCAGAATAAAGCCTGAAAATGAAAAATTCATTCAATGGGCCATAGCATTACCCTAATAGCCAATCCAAATAAGGACATTACAAGAAAAGAAATCTATAGACCAGTATCTCTTATGAACATGAACAAAAAAATCCTCAGCAAAATATTAGCAAATTCAATACAACAATGTATAGATCTGAACAGATATATCACCAAAGAAGATTTACAGATGAAAAATAAGCATATGAAAAAATTCTTAGCACCATTTGTCATTAGGTAATTGCAAATTGAAAAATAATGATGAGATACCACTATACACCAGTTAGAATGGCTAAAATAAAAAAAAATAATAATAACTGAAAATACCAAATACTGGCAAGGATGTGGAGCAACAGAAACTTTTGTTTATTGCTGGTGGGAATGCAAAATGCTACAGCCATTTTGAAAGAAATGTTGGCAGTTTCTTATAAAGCTAACATAGTCTTATCATATGATCCAGCAATCATAGTCCTAGATATTTGTCCAATTAATTTGAAAAAATATGTCCCAGAAGAGGGAAAAAAATGACATGCAACCACTTTTCATGGCAAGGTGAAACAACATTAAGCACTCAGTATATTTCAATATCAGAGAAATTTGTTTAAATTTTTGGCACAGTTTTAAAAAATGTATCCCCAACTAAACTGGAGAAATTAGGTAGAACATAGTCTGCTAAATATTTCTAGAATTCAAGGTACCTTTGAAAAGAATTATACATAGAAGAAATCTTTTAAAACAGAAGTGTTAAAATCTTGTATATTTAAAAAGAGAAACAAAAACTTCCTAGAAGGATGTACTAAATAGTTGATTTCTCACATTATGAAGGAACTGTCCTGCCCTCAAAACTTCTCCATGTCCATATAACTCACAAGCACACAAAATTTTCAGGATAAAAAAATAAGCATCTCTGGTTACCCAACCATATGTCTTATAGAACAAACAGGAAAAATGGAGAAAGAAGACAGATATT	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_594:HG2_Ill_tnscope_1289:HG3_PB_pbsv_11175:HG3_Ill_SVrefine2DISCOVARDovetail_8432:HG3_Ill_GATKHCSBGrefine_7642:HG2_PB_pbsv_11459:HG2_PB_assemblyticsPBcR_2997:HG2_PB_SVrefine2PBcRplusDovetail_1305:HG2_PB_SVrefine2PB10Xhap12_8308:HG2_PB_SVrefine2Falcon2Bionano_5501:HG2_PB_SVrefine2Falcon1plusDovetail_1363:HG2_Ill_breakscan11_1657:HG2_Ill_SpiralSDKrefine_1987:HG2_Ill_SVrefine2DISCOVARplusDovetail_1567:HG2_Ill_MetaSV_606:HG2_10X_SVrefine210Xhap12_8045:HG3_10X_allpass_2275:HG2_10X_allpass_1874:HG2_PB_assemblyticsfalcon_3081:HG2_Ill_Krunchall_15717;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8045:HG2_Ill_MetaSV_606:HG2_Ill_SVrefine2DISCOVARplusDovetail_1567:HG2_Ill_SpiralSDKrefine_1987:HG2_Ill_breakscan11_1657:HG2_PB_SVrefine2Falcon1plusDovetail_1363:HG2_PB_SVrefine2Falcon2Bionano_5501:HG2_PB_SVrefine2PB10Xhap12_8308:HG2_PB_SVrefine2PBcRplusDovetail_1305:HG2_PB_assemblyticsPBcR_2997:HG2_PB_pbsv_11459:HG3_Ill_GATKHCSBGrefine_7642:HG3_Ill_SVrefine2DISCOVARDovetail_8432:HG3_PB_pbsv_11175;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00504626;ClusterMaxSizeDiff=0.00504626;ClusterMaxEditDist=0.00504626;PBcalls=8;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1190;DistBack=34874;DistForward=39133;DistMin=34874;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=10:85522716-85523905;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:36:0|1:42:0:0:35:1|0:0:33:48:0:0/1:45:18:0/1:87:51:.:.:.
chr10	85626217	HG3_Ill_MetaSV_595	TAAAAGAGACCTTGGGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8046:HG3_PB_HySA_17310:HG4_Ill_Krunchall_15989:HG3_Ill_Krunchall_15397:HG2_Ill_Krunchall_15718:HG2_PB_pbsv_11460:HG4_Ill_GATKHCSBGrefine_7951:HG3_Ill_GATKHCSBGrefine_7643:HG2_Ill_GATKHCSBGrefine_7748:HG2_Ill_manta_3241:HG2_Ill_SpiralSDKrefine_1988:HG4_Ill_Spiral_933:HG3_Ill_Spiral_12004:HG4_PB_pbsv_11460:HG3_PB_pbsv_11176:HG4_PB_HySA_16716:HG4_PB_SVrefine2PBcRDovetail_5741:HG4_Ill_svaba_14384:HG4_Ill_scalpel_10586:HG4_10X_allpass_2189:HG3_Ill_svaba_14479:HG3_Ill_scalpel_11040:HG3_Ill_SVrefine2DISCOVARDovetail_8434:HG3_Ill_MetaSV_595:HG3_10X_allpass_2276:HG2_PB_SVrefine2PB10Xhap12_8309:HG2_PB_SVrefine2Falcon2Bionano_5502:HG2_PB_HySA_20751:HG2_Ill_svaba_14323:HG2_Ill_scalpel_10880:HG2_10X_allpass_1875;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8046:HG4_PB_SVrefine2PBcRDovetail_5741:HG4_Ill_svaba_14384:HG4_Ill_scalpel_10586:HG4_10X_allpass_2189:HG3_Ill_svaba_14479:HG3_Ill_scalpel_11040:HG3_Ill_SVrefine2DISCOVARDovetail_8434:HG3_Ill_MetaSV_595:HG3_10X_allpass_2276:HG2_PB_SVrefine2PB10Xhap12_8309:HG2_PB_SVrefine2Falcon2Bionano_5502:HG2_PB_HySA_20751:HG2_Ill_svaba_14323:HG2_Ill_scalpel_10880:HG2_10X_allpass_1875;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0332542;ClusterMaxSizeDiff=0.0332542;ClusterMaxEditDist=0.0332542;PBcalls=9;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-207;DistBack=2129;DistForward=-200;DistMin=-200;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=10:85626218-85626439;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9952;PctRecOverlap=0.976;SizeDiff=1;StartDistance=-5;EndDistance=-4;GTMatch=0;TruScore=98;MatchId=457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:28:0:0:27:0|1:37:0:0:21:0/1:15:19:./.:.:.:.:.:.
chr10	88666175	HG4_Ill_GATKHCSBGrefine_7961	TTAAAACACTTTGTCCTTTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGCCAGGAGATCGAGACCATACTGGCTAACATGGTGAAACTCCGTCTCTACCAAAAATACAAAAAAAGAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGGATGGCGTGAATCCGGGAGGCGGAGCTTGCAGTGAGCCGACATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_16009:HG4_PB_pbsv_11479:HG4_10X_allpass_2192:HG2_10X_allpass_1876:HG2_PB_assemblyticsfalcon_3100:HG2_PB_assemblyticsPBcR_3017:HG2_PB_pbsv_11473:HG4_PB_SVrefine2Falcon1Dovetail_6962:HG4_PB_assemblyticsfalcon_2999:HG2_PB_SVrefine2PB10Xhap12_8317:HG2_PB_PB10Xdip_4768:HG2_Ill_tnscope_1290:HG2_PB_SVrefine2PBcRplusDovetail_1314:HG2_PB_SVrefine2PB10Xhap12_8316:HG2_PB_SVrefine2Falcon1plusDovetail_1374:HG2_10X_SVrefine210Xhap12_8057:HG4_Ill_MetaSV_627:HG2_PB_HySA_20770:HG2_Ill_MetaSV_612:HG4_Ill_manta_2751:HG4_Ill_GATKHCSBGrefine_7961:HG2_Ill_manta_3246:HG2_Ill_breakscan11_1658:HG2_Ill_SpiralSDKrefine_2005:HG2_Ill_GATKHCSBGrefine_7753:HG2_Ill_Spiral_799;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7753:HG2_Ill_SpiralSDKrefine_2005:HG2_Ill_breakscan11_1658:HG2_Ill_manta_3246:HG4_Ill_GATKHCSBGrefine_7961:HG4_Ill_manta_2751;NumExactMatchSVs=6;ClusterMaxShiftDist=0.108434;ClusterMaxSizeDiff=0.108434;ClusterMaxEditDist=0.248485;PBcalls=12;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=-340;DistBack=22002;DistForward=33056;DistMin=22002;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=10:88666177-88666533;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:41:0|1:29:1:3:37:0|1:58:0:0:29:0/1:25:22:0/1:29:5:.:.:.
chr10	89275798	HG3_PB_assemblyticsfalcon_3080	CTGGTCTCGAACTCCTGAACTCAAGTGATCCGCCCGCCTCACCCTCCCAAAGTGCTGGGTTTACAGGTGTGAGCCACCGCACCTGGCCAAGAATGTTTTTTACAATTAAAAATTAATAGACATTTATGAAATTCTGAGATAATTAGATATCCTGGACTTTGTGTACCTTCAGCAAGCATTTTTTGAGTTTCCGTTCTGTGACAAGCACTTGCTTGGAACTAAAGACACTAACATAAGATAGATATTGTCCTCAAAGAATGCCACAAGGAATGAAAGACATGTAACTAAACCATTGCAAGACAATAGGATGTCTATACAGTGATAGAAGTATACTCAGATGCTCCTTAAGTTATGGTGGGGTTGCATCCAGATAAACCCATGGTAGATTGAATATCTTAAGTTGGAAGTACATTTACGACTTACAATGGATTTATCCAGACATAGCCTCGTTGTAAGTCAAGGAGCGCACTGAAAGTGTATTGCTTTTGAACCATTGTAAAGTTGAAAAATTTTAAGTCAAACCATCATAAGTTGCAGACTGCCCATGAAAGGTGTAGTGGGGCACAAAGGAGAAAGTTAATTTGTAGGATAGCTTTTTTGCAATTTGTGTCTGCTTTAATAAGTATATCTAGATTTTCTCTCTCCTGGGATTAGTTTTGGTATTTAATATACCTATAAAAGTCATTTATGTTATCCATTATTTGCTGAATTAAGCAAATATATCTTTTGATTTTAAAAAGTGTTTTCCTTCTCTGAAATTATTTCTCCGTA	TGAAAATACATGT	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_3021:HG4_PB_pbsv_11480:HG2_PB_PB10Xdip_4773:HG2_PB_PB10Xdip_4772:HG2_Ill_tnscope_1291:HG4_PB_assemblyticsfalcon_3002:HG4_PB_SVrefine2Falcon1Dovetail_6963:HG3_PB_assemblyticsfalcon_3080:HG3_PB_SVrefine2PBcRDovetail_5357:HG3_PB_SVrefine2Falcon1Dovetail_6915:HG3_Ill_manta_2645:HG3_Ill_SVrefine2DISCOVARDovetail_8453:HG2_PB_assemblyticsfalcon_3103:HG2_PB_SVrefine2PBcRplusDovetail_1316:HG2_PB_SVrefine2PB10Xhap12_8318:HG2_PB_SVrefine2Falcon2Bionano_5511:HG2_PB_SVrefine2Falcon1plusDovetail_1375:HG2_Ill_SVrefine2DISCOVARplusDovetail_1582:HG2_10X_SVrefine210Xhap12_8059:HG3_PB_HySA_17326:HG2_PB_HySA_20787:HG3_Ill_MetaSV_601:HG3_10X_allpass_2277:HG4_Ill_Krunchall_16011:HG3_Ill_Krunchall_15413:HG3_PB_pbsv_11186:HG2_PB_pbsv_11474:HG4_Ill_MetaSV_628:HG2_Ill_MetaSV_613;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8059:HG2_Ill_SVrefine2DISCOVARplusDovetail_1582:HG2_PB_PB10Xdip_4773:HG4_PB_assemblyticsfalcon_3002:HG4_PB_SVrefine2Falcon1Dovetail_6963:HG3_PB_assemblyticsfalcon_3080:HG3_PB_SVrefine2PBcRDovetail_5357:HG3_PB_SVrefine2Falcon1Dovetail_6915:HG3_Ill_manta_2645:HG3_Ill_SVrefine2DISCOVARDovetail_8453:HG2_PB_assemblyticsfalcon_3103:HG2_PB_SVrefine2PBcRplusDovetail_1316:HG2_PB_SVrefine2PB10Xhap12_8318:HG2_PB_SVrefine2Falcon2Bionano_5511:HG2_PB_SVrefine2Falcon1plusDovetail_1375;NumExactMatchSVs=15;ClusterMaxShiftDist=0.070558;ClusterMaxSizeDiff=0.070558;ClusterMaxEditDist=0.070558;PBcalls=18;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=11;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-758;DistBack=8107;DistForward=-753;DistMin=-753;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:89275798-89276568;PctSeqSimilarity=0.9398;PctSizeSimilarity=0.9934;PctRecOverlap=0.9767;SizeDiff=5;StartDistance=1;EndDistance=18;GTMatch=0;TruScore=96;MatchId=459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:34:0|1:21:0:0:35:0|1:52:0:0:29:0/1:54:9:0/1:63:17:.:.:0.783699
chr10	90116515	HG2_10X_SVrefine210Xhap12_8064	ATGGCTATTGGCCATCACATCTCTAGAATTCAGATAGATTGTCTTAATCTCCTCAGATTGCTGACTAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8064:HG2_PB_HySA_20799:HG2_PB_pbsv_11482:HG3_PB_pbsv_11193:HG3_PB_SVrefine2PBcRDovetail_5362:HG3_Ill_svaba_14502:HG3_Ill_manta_2646:HG3_Ill_SVrefine2DISCOVARDovetail_8460:HG3_Ill_Krunchall_15425:HG3_Ill_GATKHCSBGrefine_7656:HG3_Ill_250bpfermikitraw_14965:HG2_PB_SVrefine2PBcRplusDovetail_1320:HG2_PB_SVrefine2PB10Xhap12_8322:HG2_PB_SVrefine2Falcon2Bionano_5516:HG2_PB_SVrefine2Falcon1plusDovetail_1379:HG2_Ill_svaba_14344:HG2_Ill_manta_3247:HG2_Ill_SpiralSDKrefine_2012:HG2_Ill_GATKHCSBGrefine_7759:HG2_Ill_250bpfermikitraw_15393:HG2_Ill_150bpfermikitraw_14490;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8064:HG3_PB_SVrefine2PBcRDovetail_5362:HG3_Ill_svaba_14502:HG3_Ill_manta_2646:HG3_Ill_SVrefine2DISCOVARDovetail_8460:HG3_Ill_Krunchall_15425:HG3_Ill_GATKHCSBGrefine_7656:HG3_Ill_250bpfermikitraw_14965:HG2_PB_SVrefine2PBcRplusDovetail_1320:HG2_PB_SVrefine2PB10Xhap12_8322:HG2_PB_SVrefine2Falcon2Bionano_5516:HG2_PB_SVrefine2Falcon1plusDovetail_1379:HG2_Ill_svaba_14344:HG2_Ill_manta_3247:HG2_Ill_SpiralSDKrefine_2012:HG2_Ill_GATKHCSBGrefine_7759:HG2_Ill_250bpfermikitraw_15393:HG2_Ill_150bpfermikitraw_14490;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0149254;ClusterMaxSizeDiff=0.0148148;ClusterMaxEditDist=0.0447761;PBcalls=8;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-67;DistBack=15679;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=10:90116516-90116657;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:./.:25:13:5:21:1|0:0:17:24:2:0/1:31:20:./.:.:.:.:.:.
chr10	90454978	HG2_Ill_GATKHC_18489	CATATATACATAAATATATATATAAAATATTATATATATTTTATATATATTATATATTGTATATATATATGTAATATATATATACATATATATTTATTACATATACATATATATTTATGTATATAT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_11489:HG4_Ill_Krunchall_16022:HG3_Ill_Krunchall_15428:HG2_Ill_Krunchall_15745:HG2_PB_pbsv_11483:HG3_PB_pbsv_11194:HG4_PB_assemblyticsfalcon_3012:HG4_PB_SVrefine2PBcRDovetail_5760:HG4_PB_SVrefine2Falcon1Dovetail_6969:HG4_Ill_svaba_14410:HG4_Ill_SVrefine2DISCOVARDovetail_8254:HG4_Ill_MetaSV_630:HG4_Ill_GATKHC_18514:HG4_Ill_GATKHCSBGrefine_7968:HG4_10X_allpass_2193:HG3_PB_SVrefine2PBcRDovetail_5364:HG3_Ill_svaba_14504:HG3_Ill_manta_2647:HG3_Ill_MetaSV_603:HG3_Ill_GATKHC_18386:HG3_Ill_GATKHCSBGrefine_7657:HG2_PB_SVrefine2Falcon2Bionano_5517:HG2_Ill_svaba_14346:HG2_Ill_manta_3248:HG2_Ill_SpiralSDKrefine_2015:HG2_Ill_MetaSV_615:HG2_Ill_GATKHC_18489:HG2_Ill_GATKHCSBGrefine_7760:HG2_10X_SVrefine210Xhap12_8066;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8066:HG2_Ill_GATKHCSBGrefine_7760:HG2_Ill_GATKHC_18489:HG2_Ill_MetaSV_615:HG2_Ill_SpiralSDKrefine_2015:HG2_Ill_manta_3248:HG2_Ill_svaba_14346:HG2_PB_SVrefine2Falcon2Bionano_5517:HG3_Ill_GATKHCSBGrefine_7657:HG3_Ill_GATKHC_18386:HG3_Ill_MetaSV_603:HG3_Ill_manta_2647:HG3_Ill_svaba_14504:HG3_PB_SVrefine2PBcRDovetail_5364:HG4_10X_allpass_2193:HG4_Ill_GATKHCSBGrefine_7968:HG4_Ill_GATKHC_18514:HG4_Ill_MetaSV_630:HG4_Ill_SVrefine2DISCOVARDovetail_8254:HG4_Ill_svaba_14410:HG4_PB_SVrefine2Falcon1Dovetail_6969:HG4_PB_SVrefine2PBcRDovetail_5760:HG4_PB_assemblyticsfalcon_3012;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.0728745;PBcalls=8;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-125;DistBack=15939;DistForward=-64;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=10:90454979-90455129;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=461.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:28:0|1:26:4:1:28:0|1:25:0:0:13:0/1:28:11:./.:.:.:.:.:.
chr10	92969202	HG2_PB_SVrefine2PBcRplusDovetail_1324	CAAAAAAAATTAGATTAAAAAGAAAAAGGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCAACAGAGCGAGACTCCGTCTCGAAGAAAAAAAAAGAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8070:HG4_10X_allpass_2199:HG3_10X_allpass_2281:HG3_PB_pbsv_11201:HG2_PB_pbsv_11491:HG2_10X_allpass_1879:HG2_PB_assemblyticsPBcR_3046:HG4_PB_assemblyticsfalcon_3030:HG3_PB_assemblyticsfalcon_3100:HG2_PB_assemblyticsfalcon_3132:HG3_Ill_Krunchall_15450:HG2_Ill_Krunchall_15767:HG2_PB_HySA_20825:HG4_PB_pbsv_11500:HG4_Ill_scalpel_10617:HG4_Ill_manta_2757:HG4_Ill_MetaSV_640:HG4_Ill_GATKHCSBGrefine_7980:HG3_PB_HySA_17361:HG3_Ill_GATKHCSBGrefine_7664:HG2_Ill_manta_3254:HG2_Ill_GATKHCSBGrefine_7767:HG3_Ill_MetaSV_605:HG2_Ill_tnscope_1293:HG2_Ill_MetaSV_618:HG2_Ill_breakscan11_1660:HG4_PB_SVrefine2Falcon1Dovetail_6975:HG3_PB_SVrefine2PBcRDovetail_5366:HG3_PB_SVrefine2Falcon1Dovetail_6926:HG3_Ill_SVrefine2DISCOVARDovetail_8468:HG2_PB_SVrefine2PBcRplusDovetail_1324:HG2_PB_SVrefine2PB10Xhap12_8328:HG2_PB_SVrefine2Falcon2Bionano_5522:HG2_PB_SVrefine2Falcon1plusDovetail_1384:HG2_Ill_SVrefine2DISCOVARplusDovetail_1595;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8070:HG4_PB_SVrefine2Falcon1Dovetail_6975:HG3_PB_SVrefine2PBcRDovetail_5366:HG3_PB_SVrefine2Falcon1Dovetail_6926:HG3_Ill_SVrefine2DISCOVARDovetail_8468:HG2_PB_SVrefine2PBcRplusDovetail_1324:HG2_PB_SVrefine2PB10Xhap12_8328:HG2_PB_SVrefine2Falcon2Bionano_5522:HG2_PB_SVrefine2Falcon1plusDovetail_1384:HG2_Ill_SVrefine2DISCOVARplusDovetail_1595;NumExactMatchSVs=10;ClusterMaxShiftDist=0.191199;ClusterMaxSizeDiff=0.191199;ClusterMaxEditDist=0.191199;PBcalls=16;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=106395;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=28;REFWIDENED=10:92969203-92969569;PctSeqSimilarity=0.9586;PctSizeSimilarity=0.9971;PctRecOverlap=0.9324;SizeDiff=1;StartDistance=-23;EndDistance=-22;GTMatch=0;TruScore=96;MatchId=462.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:1/1:1:18:1:28:./.:2:12:2:17:0/1:6:34:0/1:4:10:.:.:.
chr10	93633335	HG3_PB_pbsv_11205	TCACTTTTTAAAATTACACTTTGGTTTCCCCCTTCATTCCCTTTGACCAGCAATTTCACTTCTGGGAATTGATCCTACATATTTGCTCACACAGAAATATTACATGATCATATAGTTGTTCGCTGAAACATTTTTTAATTTTTCTTTCTTTTTTTTTTTTTTGGTAATGTTTGAAACATTGTCAATGTTAATCAATAGGATACTGGTAAAATAGAAGGTGACACATTCACAAGATGGAATTCCTTGCATTTGTAAAGTTGTAAAGAAGGCTGAGGATGTGTTCTATGTACTAGTGTGAAAAGATCCGCAAGATACATTGAGTGAAAGGGAGATGGCCCAGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAATGTGGGAGGATTGTTTGAAGTCAGGAGTCAAGACCAGCCTAGCCAACATAGGGAGACCCTGTCTCAAAAAAAAAAATTGTTTTAATTAGCTGGATATGGTGGCAGGCACCTATAGTCCCATCTGCTCAGGAGGCTGAGGTGGGAGGATCACTTGTACTCAGGAGTTTGAGGCTGCAGCAAGCTATGATCACACCACTGCACTTTAGCCTGGGCAAGAGAGTGAGACTCTGTCTCAAAAAAAAAAGAAAGAAAAGAAAATAGAAGATGCAGATGGTGGATATAATATGAATTTTAAAGGTGAGGTTAAAATATATACATATAATTATATGTGCTCATATATGTATTAAAATTTCTGGCAGGATATACTAGAAACAAACGACAGTATTTATTAAATGTTGGAAAATTGGGTGTAAATGGGGAATAGGGATAGAAGAGAGACTTTACTGAATACCTGTTTATACTTTAATATTTTTGAACTATGAAAGCAATACGTATTCAAAAATTAAATAATTTATATTTTAAAACCAACAAATACATTAAAATTACACTTTGGCTTCCCCTCCCACCAAGCACTGCCATTAGGATTTTGCTTCAGGACCAGAAAAACAAAACAAAACAAACACTCTTCTAAAGAAACCAGCCCTTGGGCCTCCCTTTGTCCTTTCAAATAGTGACTTGCAGAAATTCCAATTCAGCAACATTTCTCCCCTCTGGCTTCAGAACTGTTGCATGCTAACTTTTTATTCCCCTCTCCCCTACCTACTCCTTTTTCCCAGTTCTCGTTAATCTTCCCTGGGCCTCCTCTTTAAACACTACCGTAGCCACCAGAACTCTCTGATTTATAG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1661:HG4_10X_allpass_2201:HG3_10X_allpass_2283:HG2_10X_allpass_1881:HG4_PB_assemblyticsfalcon_3035:HG2_PB_assemblyticsPBcR_3052:HG3_PB_assemblyticsfalcon_3105:HG2_PB_assemblyticsfalcon_3137:HG3_Ill_Krunchall_15458:HG2_PB_pbsv_11494:HG2_Ill_Krunchall_15773:HG2_PB_HySA_20830:HG2_Ill_tnscope_1294:HG4_PB_pbsv_11504:HG4_PB_SVrefine2Falcon1Dovetail_6977:HG4_Ill_MetaSV_642:HG4_Ill_GATKHCSBGrefine_7985:HG3_PB_pbsv_11205:HG3_PB_SVrefine2PBcRDovetail_5367:HG3_PB_SVrefine2Falcon1Dovetail_6928:HG3_Ill_SVrefine2DISCOVARDovetail_8474:HG3_Ill_MetaSV_607:HG3_Ill_GATKHCSBGrefine_7669:HG2_PB_SVrefine2PBcRplusDovetail_1327:HG2_PB_SVrefine2PB10Xhap12_8330:HG2_PB_SVrefine2Falcon2Bionano_5524:HG2_PB_SVrefine2Falcon1plusDovetail_1386:HG2_Ill_SpiralSDKrefine_2029:HG2_Ill_SVrefine2DISCOVARplusDovetail_1600:HG2_Ill_MetaSV_620:HG2_Ill_GATKHCSBGrefine_7771:HG2_10X_SVrefine210Xhap12_8073;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8073:HG2_Ill_GATKHCSBGrefine_7771:HG2_Ill_MetaSV_620:HG2_Ill_SVrefine2DISCOVARplusDovetail_1600:HG2_Ill_SpiralSDKrefine_2029:HG2_PB_SVrefine2Falcon1plusDovetail_1386:HG2_PB_SVrefine2Falcon2Bionano_5524:HG2_PB_SVrefine2PB10Xhap12_8330:HG2_PB_SVrefine2PBcRplusDovetail_1327:HG3_Ill_GATKHCSBGrefine_7669:HG3_Ill_MetaSV_607:HG3_Ill_SVrefine2DISCOVARDovetail_8474:HG3_PB_SVrefine2Falcon1Dovetail_6928:HG3_PB_SVrefine2PBcRDovetail_5367:HG3_PB_pbsv_11205:HG4_Ill_GATKHCSBGrefine_7985:HG4_Ill_MetaSV_642:HG4_PB_SVrefine2Falcon1Dovetail_6977:HG4_PB_pbsv_11504;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00653061;ClusterMaxSizeDiff=0.00653061;ClusterMaxEditDist=0.00653061;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1227;DistBack=80245;DistForward=43056;DistMin=43056;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=10:93633336-93634565;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:43:1/1:0:17:0:27:./.:2:28:0:28:1/1:0:16:1/1:3:77:1250:.:.
chr10	94134600	HG3_PB_SVrefine2Falcon1Dovetail_6930	CCTAACCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCTGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCTATCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGAGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTTGAGGGGGGGGTCAGCCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCACCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGAGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTTGGGGGGGGGTCAGCCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCCGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCGCCCCGTCCGGGAGGGAGGTTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAAAAAAAGAATGGACTTTCCCAGGCCAGCTGTGGTGGCTCACGACTGTAATCCCAGCACTGTGGCAGGCCAAGGCGGGCAGATCACCTGAGATCAGGAGTTCAAGACCAGCCTGACCAACACGGAGAAACCCCGTCTCTACTAAAAATAAAAAAAATTAGCTGGGCGTGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGTTGTGAGCTGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAGAGGGAAACTCCATCAAAAAAAAAAAAAAAAAAAAAGGACTTTCTCAAAGAAAATGTATTTAAATGTCTGCACCAATAATTCCAGCATGTGTATGAATAAATATGATATGTCCTTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	GTTGACTTATCTTTT	20	PASS	ClusterIDs=HG2_Ill_Krunchall_15778:HG4_PB_pbsv_11506:HG3_PB_pbsv_11208:HG3_PB_HySA_17366:HG4_PB_HySA_16760:HG2_Ill_tnscope_1295:HG4_PB_SVrefine2PBcRDovetail_5775:HG4_PB_SVrefine2Falcon1Dovetail_6979:HG4_Ill_SVrefine2DISCOVARDovetail_8275:HG3_PB_assemblyticsfalcon_3107:HG3_PB_SVrefine2PBcRDovetail_5369:HG3_PB_SVrefine2Falcon1Dovetail_6930:HG3_Ill_SVrefine2DISCOVARDovetail_8480:HG2_PB_SVrefine2PBcRplusDovetail_1329:HG2_PB_SVrefine2PB10Xhap12_8332:HG2_PB_SVrefine2Falcon2Bionano_5526:HG2_PB_SVrefine2Falcon1plusDovetail_1388:HG2_PB_PB10Xdip_4839:HG2_Ill_SVrefine2DISCOVARplusDovetail_1603:HG2_10X_SVrefine210Xhap12_8076:HG4_PB_assemblyticsfalcon_3038:HG2_PB_assemblyticsfalcon_3141:HG2_PB_assemblyticsPBcR_3055:HG4_Ill_MetaSV_643:HG3_Ill_MetaSV_608:HG2_Ill_MetaSV_621:HG2_10X_allpass_1882:HG4_10X_allpass_2202:HG3_10X_allpass_2284:HG2_PB_pbsv_11496:HG4_Ill_Krunchall_16046:HG3_Ill_Krunchall_15464;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8076:HG2_Ill_SVrefine2DISCOVARplusDovetail_1603:HG2_PB_PB10Xdip_4839:HG2_PB_SVrefine2Falcon1plusDovetail_1388:HG2_PB_SVrefine2Falcon2Bionano_5526:HG2_PB_SVrefine2PB10Xhap12_8332:HG2_PB_SVrefine2PBcRplusDovetail_1329:HG3_Ill_SVrefine2DISCOVARDovetail_8480:HG3_PB_SVrefine2Falcon1Dovetail_6930:HG3_PB_SVrefine2PBcRDovetail_5369:HG3_PB_assemblyticsfalcon_3107:HG4_Ill_SVrefine2DISCOVARDovetail_8275:HG4_PB_SVrefine2Falcon1Dovetail_6979:HG4_PB_SVrefine2PBcRDovetail_5775;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00590745;ClusterMaxSizeDiff=0.00590745;ClusterMaxEditDist=0.00590745;PBcalls=18;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3039;DistBack=-1165;DistForward=-1885;DistMin=-1885;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:94134600-94137653;PctSeqSimilarity=0.998;PctSizeSimilarity=0.9993;PctRecOverlap=0.9961;SizeDiff=-2;StartDistance=-12;EndDistance=0;GTMatch=0;TruScore=99;MatchId=464.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:87:1/1:0:36:0:14:1/1:0:29:0:20:1/1:0:37:1/1:3:184:2962:.:.
chr10	96251541	HG2_Ill_scalpel_10928	TTCAAAGAACCCTTATTTTATTAGTAATGCCCCCAAAGCTTAAGAGTAGTGGTGCTGACAATTCAGATATGCCAAAGAGAAGCTGTAAAGTTCCTCCTTTAAGCAAAAAGGTGAAAGTTCTCAAATTAATAAGAAAAAAAAATCATATGCTGAAGTTGCTAAGATCTGTGGTAAGAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_11517:HG4_Ill_Krunchall_16066:HG3_Ill_Krunchall_15483:HG2_Ill_Krunchall_15794:HG4_PB_assemblyticsfalcon_3054:HG2_PB_assemblyticsfalcon_3158:HG2_PB_assemblyticsPBcR_3078:HG3_PB_assemblyticsfalcon_3124:HG4_PB_SVrefine2PBcRDovetail_5780:HG4_PB_SVrefine2Falcon1Dovetail_6985:HG4_Ill_svaba_14443:HG4_Ill_manta_2760:HG4_Ill_SVrefine2DISCOVARDovetail_8289:HG4_Ill_MetaSV_646:HG4_Ill_GATKHCSBGrefine_8004:HG4_10X_allpass_2204:HG3_PB_pbsv_11218:HG3_PB_SVrefine2PBcRDovetail_5376:HG3_PB_SVrefine2Falcon1Dovetail_6937:HG3_Ill_svaba_14545:HG3_Ill_scalpel_11098:HG3_Ill_manta_2655:HG3_Ill_SVrefine2DISCOVARDovetail_8493:HG3_Ill_MetaSV_612:HG3_Ill_GATKHCSBGrefine_7682:HG3_10X_allpass_2286:HG2_PB_pbsv_11504:HG2_PB_SVrefine2PBcRplusDovetail_1333:HG2_PB_SVrefine2PB10Xhap12_8336:HG2_PB_SVrefine2Falcon2Bionano_5534:HG2_PB_SVrefine2Falcon1plusDovetail_1395:HG2_Ill_svaba_14379:HG2_Ill_scalpel_10928:HG2_Ill_manta_3256:HG2_Ill_breakscan11_1662:HG2_Ill_SpiralSDKrefine_2048:HG2_Ill_SVrefine2DISCOVARplusDovetail_1615:HG2_Ill_MetaSV_624:HG2_Ill_GATKHCSBGrefine_7787:HG2_Ill_250bpfermikitraw_15433:HG2_Ill_150bpfermikitraw_14525:HG2_CG_vcfBeta_6580:HG2_10X_SVrefine210Xhap12_8082:HG2_PB_HySA_20851;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8082:HG2_CG_vcfBeta_6580:HG2_Ill_150bpfermikitraw_14525:HG2_Ill_250bpfermikitraw_15433:HG2_Ill_GATKHCSBGrefine_7787:HG2_Ill_MetaSV_624:HG2_Ill_SVrefine2DISCOVARplusDovetail_1615:HG2_Ill_SpiralSDKrefine_2048:HG2_Ill_breakscan11_1662:HG2_Ill_manta_3256:HG2_Ill_scalpel_10928:HG2_Ill_svaba_14379:HG2_PB_SVrefine2Falcon1plusDovetail_1395:HG2_PB_SVrefine2Falcon2Bionano_5534:HG2_PB_SVrefine2PB10Xhap12_8336:HG2_PB_SVrefine2PBcRplusDovetail_1333:HG2_PB_pbsv_11504:HG3_10X_allpass_2286:HG3_Ill_GATKHCSBGrefine_7682:HG3_Ill_MetaSV_612:HG3_Ill_SVrefine2DISCOVARDovetail_8493:HG3_Ill_manta_2655:HG3_Ill_scalpel_11098:HG3_Ill_svaba_14545:HG3_PB_SVrefine2Falcon1Dovetail_6937:HG3_PB_SVrefine2PBcRDovetail_5376:HG3_PB_pbsv_11218:HG4_10X_allpass_2204:HG4_Ill_GATKHCSBGrefine_8004:HG4_Ill_MetaSV_646:HG4_Ill_SVrefine2DISCOVARDovetail_8289:HG4_Ill_manta_2760:HG4_Ill_svaba_14443:HG4_PB_SVrefine2Falcon1Dovetail_6985:HG4_PB_SVrefine2PBcRDovetail_5780;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0284091;ClusterMaxSizeDiff=0.0284091;ClusterMaxEditDist=0.0571429;PBcalls=16;Illcalls=24;TenXcalls=3;CGcalls=1;PBexactcalls=10;Illexactcalls=21;TenXexactcalls=3;CGexactcalls=1;HG2count=21;HG3count=12;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-176;DistBack=-117;DistForward=-97;DistMin=-117;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=10:96251542-96251720;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:./.:0:0:0:0:./.:0:0:0:0:1/1:0:38:./.:.:.:.:.:.
chr10	96809615	HG3_PB_SVrefine2Falcon1Dovetail_6938	TTGAGGAGTGGGGGGCTTGAATAGCTAGCAGCAATACCCAGGTACTATGTTGAGGGCTTTGGGTAAGTCTCTGAGGCTTACCGGCTTCAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_11505:HG4_Ill_GATKHC_18567:HG4_Ill_GATKHCSBGrefine_8005:HG2_Ill_GATKHC_18539:HG2_Ill_GATKHCSBGrefine_7788:HG2_Ill_SpiralSDKrefine_2049:HG2_PB_HySA_20854:HG4_PB_SVrefine2PBcRDovetail_5781:HG4_PB_SVrefine2Falcon1Dovetail_6987:HG4_Ill_manta_2761:HG4_Ill_SVrefine2DISCOVARDovetail_8292:HG4_CG_vcfBeta_7368:HG3_PB_assemblyticsfalcon_3127:HG3_PB_SVrefine2Falcon1Dovetail_6938:HG2_PB_SVrefine2PBcRplusDovetail_1334:HG2_PB_SVrefine2PB10Xhap12_8337:HG2_PB_SVrefine2Falcon2Bionano_5535:HG2_PB_SVrefine2Falcon1plusDovetail_1396:HG2_PB_PB10Xdip_4845:HG2_Ill_manta_3257:HG2_Ill_SVrefine2DISCOVARplusDovetail_1617:HG2_10X_SVrefine210Xhap12_8084:HG4_Ill_Spiral_937:HG2_Ill_Spiral_801:HG4_Ill_svaba_14446:HG4_Ill_scalpel_10640:HG4_Ill_Krunchall_16071:HG4_Ill_250bpfermikitraw_15321:HG4_Ill_150bpfermikitraw_14702:HG4_10X_allpass_2205:HG2_Ill_svaba_14380:HG2_Ill_scalpel_10929:HG2_Ill_Krunchall_15796:HG2_Ill_250bpfermikitraw_15435:HG2_Ill_150bpfermikitraw_14528:HG4_PB_pbsv_11518:HG4_PB_assemblyticsfalcon_3062:HG2_PB_assemblyticsfalcon_3160:HG2_PB_assemblyticsPBcR_3080;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8084:HG2_Ill_SVrefine2DISCOVARplusDovetail_1617:HG2_Ill_manta_3257:HG2_PB_PB10Xdip_4845:HG2_PB_SVrefine2Falcon1plusDovetail_1396:HG2_PB_SVrefine2Falcon2Bionano_5535:HG2_PB_SVrefine2PB10Xhap12_8337:HG2_PB_SVrefine2PBcRplusDovetail_1334:HG3_PB_SVrefine2Falcon1Dovetail_6938:HG3_PB_assemblyticsfalcon_3127:HG4_CG_vcfBeta_7368:HG4_Ill_SVrefine2DISCOVARDovetail_8292:HG4_Ill_manta_2761:HG4_PB_SVrefine2Falcon1Dovetail_6987:HG4_PB_SVrefine2PBcRDovetail_5781;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0449438;ClusterMaxSizeDiff=0.0449438;ClusterMaxEditDist=0.0662983;PBcalls=15;Illcalls=21;TenXcalls=2;CGcalls=1;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=1;HG2count=21;HG3count=2;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-89;DistBack=42144;DistForward=10771;DistMin=10771;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:96809615-96809704;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9888;PctRecOverlap=0.9667;SizeDiff=1;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=98;MatchId=466.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:44:0|1:33:2:3:38:1|0:0:19:19:0:0/1:34:23:./.:.:.:.:.:.
chr10	99034863	HG3_PB_SVrefine2Falcon1Dovetail_6945	TTAAAGCACTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCACCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCCGCCCAGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCGCCCGGCCAGCTGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGACCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCACGACCGGCCAGCCGCCTCGTCCGGGAGGGAGGTGGGGGCGTCAGCCCCCCGCCCGGCCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCCGGCCAGTGGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGAGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGGTCAGCCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCAGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCCTTGTGGAATAGAAAGGCGGGAAAGGCGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGTCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAATAAATAAATAAATAAAAAAAATAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1299:HG3_PB_assemblyticsfalcon_3142:HG3_10X_allpass_2287:HG2_10X_allpass_1884:HG4_10X_allpass_2207:HG4_Ill_Krunchall_16083:HG3_Ill_Krunchall_15494:HG4_PB_assemblyticsfalcon_3080:HG2_PB_assemblyticsfalcon_3178:HG2_PB_assemblyticsPBcR_3097:HG4_PB_SVrefine2Falcon1Dovetail_6994:HG4_PB_pbsv_11527:HG4_PB_SVrefine2PBcRDovetail_5788:HG4_Ill_SVrefine2DISCOVARDovetail_8304:HG4_Ill_MetaSV_651:HG4_Ill_GATKHCSBGrefine_8011:HG3_PB_pbsv_11227:HG3_PB_SVrefine2PBcRDovetail_5384:HG3_PB_SVrefine2Falcon1Dovetail_6945:HG3_Ill_SVrefine2DISCOVARDovetail_8504:HG3_Ill_MetaSV_614:HG3_Ill_GATKHCSBGrefine_7689:HG2_PB_pbsv_11514:HG2_PB_SVrefine2PBcRplusDovetail_1341:HG2_PB_SVrefine2Falcon2Bionano_5543:HG2_PB_SVrefine2Falcon1plusDovetail_1404:HG2_Ill_SVrefine2DISCOVARplusDovetail_1631:HG2_Ill_MetaSV_629:HG2_Ill_GATKHCSBGrefine_7794:HG2_10X_SVrefine210Xhap12_8091:HG2_Ill_breakscan11_1664;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8091:HG2_Ill_GATKHCSBGrefine_7794:HG2_Ill_MetaSV_629:HG2_Ill_SVrefine2DISCOVARplusDovetail_1631:HG2_PB_SVrefine2Falcon1plusDovetail_1404:HG2_PB_SVrefine2Falcon2Bionano_5543:HG2_PB_SVrefine2PBcRplusDovetail_1341:HG2_PB_pbsv_11514:HG3_Ill_GATKHCSBGrefine_7689:HG3_Ill_MetaSV_614:HG3_Ill_SVrefine2DISCOVARDovetail_8504:HG3_PB_SVrefine2Falcon1Dovetail_6945:HG3_PB_SVrefine2PBcRDovetail_5384:HG3_PB_pbsv_11227:HG4_Ill_GATKHCSBGrefine_8011:HG4_Ill_MetaSV_651:HG4_Ill_SVrefine2DISCOVARDovetail_8304:HG4_PB_SVrefine2PBcRDovetail_5788:HG4_PB_pbsv_11527;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0075084;ClusterMaxSizeDiff=0.0075084;ClusterMaxEditDist=0.0075084;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2534;DistBack=23316;DistForward=-2525;DistMin=-2525;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=10:99034864-99037407;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=467.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:111:1/1:0:6:0:23:./.:0:2:0:21:1/1:0:36:1/1:2:185:640:.:.
chr10	99108282	HG3_PB_SVrefine2PBcRDovetail_5385	GCACTATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAA	G	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5789:HG2_10X_allpass_1885:HG2_PB_assemblyticsfalcon_3179:HG2_PB_assemblyticsPBcR_3098:HG4_PB_pbsv_11528:HG2_PB_HySA_20875:HG4_Ill_MetaSV_652:HG2_Ill_tnscope_1300:HG2_Ill_MetaSV_630:HG4_Ill_manta_2763:HG4_10X_allpass_2208:HG3_PB_pbsv_11228:HG3_PB_assemblyticsfalcon_3143:HG3_PB_SVrefine2PBcRDovetail_5385:HG3_PB_SVrefine2Falcon1Dovetail_6946:HG3_Ill_scalpel_11107:HG3_Ill_manta_2657:HG3_Ill_GATKHCSBGrefine_7690:HG2_PB_pbsv_11515:HG2_PB_SVrefine2PBcRplusDovetail_1342:HG2_PB_SVrefine2PB10Xhap12_8344:HG2_PB_SVrefine2Falcon2Bionano_5544:HG2_PB_SVrefine2Falcon1plusDovetail_1405:HG2_Ill_scalpel_10937:HG2_Ill_manta_3261:HG2_Ill_breakscan11_1665:HG2_Ill_SVrefine2DISCOVARplusDovetail_1632:HG2_Ill_GATKHCSBGrefine_7795:HG2_10X_SVrefine210Xhap12_8092;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8092:HG2_Ill_GATKHCSBGrefine_7795:HG2_Ill_SVrefine2DISCOVARplusDovetail_1632:HG2_Ill_breakscan11_1665:HG2_Ill_manta_3261:HG2_Ill_scalpel_10937:HG2_PB_SVrefine2Falcon1plusDovetail_1405:HG2_PB_SVrefine2Falcon2Bionano_5544:HG2_PB_SVrefine2PB10Xhap12_8344:HG2_PB_SVrefine2PBcRplusDovetail_1342:HG2_PB_pbsv_11515:HG3_Ill_GATKHCSBGrefine_7690:HG3_Ill_manta_2657:HG3_Ill_scalpel_11107:HG3_PB_SVrefine2Falcon1Dovetail_6946:HG3_PB_SVrefine2PBcRDovetail_5385:HG3_PB_assemblyticsfalcon_3143:HG3_PB_pbsv_11228:HG4_10X_allpass_2208:HG4_Ill_manta_2763;NumExactMatchSVs=20;ClusterMaxShiftDist=0.104956;ClusterMaxSizeDiff=0.104956;ClusterMaxEditDist=0.104956;PBcalls=14;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-391;DistForward=-319;DistMin=-391;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=10:99108283-99108617;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=468.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:./.:3:5:1:19:./.:0:0:0:18:1/1:0:31:0/1:3:11:.:.:.
chr10	99157804	HG2_PB_SVrefine2Falcon2Bionano_5545	TTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1301:HG4_PB_assemblyticsfalcon_3085:HG4_PB_SVrefine2Falcon1Dovetail_6995:HG2_PB_assemblyticsfalcon_3182:HG2_PB_SVrefine2Falcon1plusDovetail_1406:HG2_Ill_SVrefine2DISCOVARplusDovetail_1634:HG2_PB_HySA_20876:HG4_PB_HySA_16807:HG4_PB_pbsv_11529:HG3_PB_pbsv_11229:HG2_PB_pbsv_11516:HG4_PB_SVrefine2PBcRDovetail_5790:HG3_PB_SVrefine2PBcRDovetail_5386:HG3_PB_SVrefine2Falcon1Dovetail_6947:HG2_PB_SVrefine2PBcRplusDovetail_1343:HG2_PB_SVrefine2PB10Xhap12_8345:HG2_PB_SVrefine2Falcon2Bionano_5545:HG2_Ill_SVrefine2DISCOVARplusDovetail_1633:HG2_Ill_MetaSV_631:HG2_10X_SVrefine210Xhap12_8094;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8094:HG2_Ill_MetaSV_631:HG2_Ill_SVrefine2DISCOVARplusDovetail_1633:HG2_PB_SVrefine2Falcon2Bionano_5545:HG2_PB_SVrefine2PB10Xhap12_8345:HG2_PB_SVrefine2PBcRplusDovetail_1343:HG3_PB_SVrefine2Falcon1Dovetail_6947:HG3_PB_SVrefine2PBcRDovetail_5386:HG4_PB_SVrefine2PBcRDovetail_5790;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0531561;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.214765;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=12935;DistForward=-289;DistMin=-289;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=282;REFWIDENED=10:99157805-99158392;PctSeqSimilarity=0.9984;PctSizeSimilarity=0.9967;PctRecOverlap=0.9967;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:./.:1:1:1:40:./.:0:0:0:3:./.:0:6:./.:2:7:.:.:.
chr10	99417568	HG2_Ill_250bpfermikitraw_15450	ACTGTCACCACCATCCATCTCCAGAGCTCTTTTTGTTGTTGTTGAGACCGAGTCTTGCT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_11517:HG4_PB_HySA_16808:HG4_PB_assemblyticsfalcon_3088:HG4_PB_pbsv_11530:HG3_PB_HySA_17415:HG3_Ill_Spiral_12086:HG2_PB_HySA_20877:HG2_Ill_Spiral_802:HG4_Ill_svaba_14461:HG4_Ill_scalpel_10651:HG4_Ill_manta_2764:HG4_Ill_Krunchall_16088:HG4_Ill_GATKHC_18591:HG4_Ill_GATKHCSBGrefine_8013:HG4_Ill_250bpfermikitraw_15340:HG4_Ill_150bpfermikitraw_14721:HG4_CG_vcfBeta_7376:HG4_10X_allpass_2209:HG3_PB_pbsv_11230:HG3_PB_SVrefine2PBcRDovetail_5387:HG3_Ill_svaba_14562:HG3_Ill_scalpel_11111:HG3_Ill_manta_2658:HG3_Ill_SVrefine2DISCOVARDovetail_8505:HG3_Ill_Krunchall_15499:HG3_Ill_GATKHC_18464:HG3_Ill_GATKHCSBGrefine_7696:HG3_Ill_250bpfermikitraw_15029:HG3_Ill_150bpfermikitraw_14574:HG3_CG_vcfBeta_6252:HG3_10X_allpass_2288:HG2_PB_SVrefine2PBcRplusDovetail_1344:HG2_PB_SVrefine2PB10Xhap12_8346:HG2_PB_SVrefine2Falcon2Bionano_5546:HG2_PB_SVrefine2Falcon1plusDovetail_1407:HG2_Ill_svaba_14391:HG2_Ill_scalpel_10939:HG2_Ill_manta_3262:HG2_Ill_SpiralSDKrefine_2058:HG2_Ill_SVrefine2DISCOVARplusDovetail_1635:HG2_Ill_Krunchall_15810:HG2_Ill_GATKHC_18559:HG2_Ill_GATKHCSBGrefine_7797:HG2_Ill_250bpfermikitraw_15450:HG2_Ill_150bpfermikitraw_14543:HG2_CG_vcfBeta_6587:HG2_10X_SVrefine210Xhap12_8095:HG4_Ill_Spiral_938;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8095:HG2_CG_vcfBeta_6587:HG2_Ill_150bpfermikitraw_14543:HG2_Ill_250bpfermikitraw_15450:HG2_Ill_GATKHCSBGrefine_7797:HG2_Ill_GATKHC_18559:HG2_Ill_Krunchall_15810:HG2_Ill_SVrefine2DISCOVARplusDovetail_1635:HG2_Ill_SpiralSDKrefine_2058:HG2_Ill_manta_3262:HG2_Ill_scalpel_10939:HG2_Ill_svaba_14391:HG2_PB_SVrefine2Falcon1plusDovetail_1407:HG2_PB_SVrefine2Falcon2Bionano_5546:HG2_PB_SVrefine2PB10Xhap12_8346:HG2_PB_SVrefine2PBcRplusDovetail_1344:HG3_10X_allpass_2288:HG3_CG_vcfBeta_6252:HG3_Ill_150bpfermikitraw_14574:HG3_Ill_250bpfermikitraw_15029:HG3_Ill_GATKHCSBGrefine_7696:HG3_Ill_GATKHC_18464:HG3_Ill_Krunchall_15499:HG3_Ill_SVrefine2DISCOVARDovetail_8505:HG3_Ill_manta_2658:HG3_Ill_scalpel_11111:HG3_Ill_svaba_14562:HG3_PB_SVrefine2PBcRDovetail_5387:HG3_PB_pbsv_11230:HG4_10X_allpass_2209:HG4_CG_vcfBeta_7376:HG4_Ill_150bpfermikitraw_14721:HG4_Ill_250bpfermikitraw_15340:HG4_Ill_GATKHCSBGrefine_8013:HG4_Ill_GATKHC_18591:HG4_Ill_Krunchall_16088:HG4_Ill_manta_2764:HG4_Ill_scalpel_10651:HG4_Ill_svaba_14461;NumExactMatchSVs=39;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.0854701;PBcalls=12;Illcalls=30;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=3;HG2count=19;HG3count=15;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-58;DistBack=14875;DistForward=-52;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=10:99417569-99417634;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:41:1/1:0:18:0:16:./.:0:0:0:15:1/1:0:41:./.:.:.:.:.:.
chr10	99438637	HG3_Ill_GATKHCSBGrefine_7697	GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	G	20	PASS	ClusterIDs=HG3_PB_HySA_17416:HG2_PB_HySA_20878:HG4_PB_HySA_16809:HG3_PB_assemblyticsfalcon_3151:HG4_Ill_SVrefine2DISCOVARDovetail_8305:HG2_PB_SVrefine2Falcon1plusDovetail_1408:HG2_Ill_SVrefine2DISCOVARplusDovetail_1636:HG2_10X_SVrefine210Xhap12_8097:HG4_PB_assemblyticsfalcon_3089:HG4_PB_SVrefine2PBcRDovetail_5791:HG3_Ill_SVrefine2DISCOVARDovetail_8506:HG3_Ill_GATKHCSBGrefine_7697:HG2_PB_SVrefine2PBcRplusDovetail_1345:HG2_PB_SVrefine2PB10Xhap12_8347:HG2_PB_SVrefine2Falcon2Bionano_5547:HG3_PB_SVrefine2PBcRDovetail_5388:HG3_Ill_GATKHC_18465;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5547:HG2_PB_SVrefine2PB10Xhap12_8347:HG2_PB_SVrefine2PBcRplusDovetail_1345:HG3_Ill_GATKHCSBGrefine_7697:HG3_Ill_SVrefine2DISCOVARDovetail_8506:HG4_PB_SVrefine2PBcRDovetail_5791:HG4_PB_assemblyticsfalcon_3089;NumExactMatchSVs=7;ClusterMaxShiftDist=0.138614;ClusterMaxSizeDiff=0.138614;ClusterMaxEditDist=0.138614;PBcalls=11;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=70;REFWIDENED=10:99438640-99438757;PctSeqSimilarity=0.9808;PctSizeSimilarity=0.9615;PctRecOverlap=0.9623;SizeDiff=-2;StartDistance=0;EndDistance=-2;GTMatch=0;TruScore=96;MatchId=471.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:38:1/1:1:8:1:27:./.:0:0:1:4:./.:2:3:./.:.:.:.:.:.
chr10	99912112	HG2_PB_SVrefine2PB10Xhap12_8350	AGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCTCGGCTGCCCAATCTGGGAAGTGAGGAGCGCCTCTTCCCGGCCGCCATCCCGTCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCAGTCTGGGAAGTGAGGAGCGCCTCTTCCCGGCCGCCATCCCGTCTAGGAAGTGAGGAGCGTCTCTGCCCAGCCGCCCATAGTCTGAGATGCGGGGAGC	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1640:HG2_Ill_SVrefine2DISCOVARplusDovetail_1641:HG2_Ill_MetaSV_633:HG2_PB_HySA_20882:HG4_Ill_GATKHCSBGrefine_8015:HG4_10X_allpass_2210:HG3_Ill_GATKHCSBGrefine_7698:HG2_Ill_GATKHCSBGrefine_7798:HG2_10X_allpass_1886:HG2_PB_pbsv_11521:HG3_PB_pbsv_11233:HG4_PB_pbsv_11534:HG2_Ill_tnscope_1302:HG3_PB_SVrefine2PBcRDovetail_5391:HG3_PB_SVrefine2Falcon1Dovetail_6950:HG2_PB_SVrefine2PBcRplusDovetail_1348:HG2_PB_SVrefine2PB10Xhap12_8350:HG2_PB_SVrefine2Falcon2Bionano_5550:HG2_PB_SVrefine2Falcon1plusDovetail_1411;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1640:HG3_PB_SVrefine2PBcRDovetail_5391:HG3_PB_SVrefine2Falcon1Dovetail_6950:HG2_PB_SVrefine2PBcRplusDovetail_1348:HG2_PB_SVrefine2PB10Xhap12_8350:HG2_PB_SVrefine2Falcon2Bionano_5550:HG2_PB_SVrefine2Falcon1plusDovetail_1411;NumExactMatchSVs=7;ClusterMaxShiftDist=0.14433;ClusterMaxSizeDiff=0.14433;ClusterMaxEditDist=0.188034;PBcalls=10;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-272;DistBack=98240;DistForward=-24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=119;REFWIDENED=10:99912113-99912503;PctSeqSimilarity=0.9188;PctSizeSimilarity=0.9926;PctRecOverlap=0.5714;SizeDiff=2;StartDistance=-117;EndDistance=-115;GTMatch=0;TruScore=82;MatchId=472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:3:75:./.:4:0:2:66:./.:2:0:7:2:0/1:21:5:./.:.:.:.:.:.
chr10	102074722	HG2_Ill_GATKHC_18583	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_11537:HG2_PB_HySA_20920:HG4_Ill_svaba_14478:HG4_Ill_GATKHC_18613:HG4_Ill_250bpfermikitraw_15362:HG2_Ill_manta_3264:HG2_Ill_GATKHC_18583:HG2_Ill_GATKHCSBGrefine_7811:HG4_PB_pbsv_11550:HG2_PB_assemblyticsPBcR_3137:HG4_Ill_Krunchall_16110;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7811:HG2_Ill_GATKHC_18583:HG2_Ill_manta_3264:HG4_Ill_250bpfermikitraw_15362:HG4_Ill_GATKHC_18613:HG4_Ill_svaba_14478;NumExactMatchSVs=6;ClusterMaxShiftDist=0.206897;ClusterMaxSizeDiff=0.206897;ClusterMaxEditDist=0.206897;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-79;DistBack=2;DistForward=-75;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=79;REFWIDENED=10:102074723-102074880;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:19:./.:6:14:12:6:./.:6:4:1:12:./.:1:5:./.:.:.:.:.:.
chr10	103394012	HG3_Ill_SVrefine2DISCOVARDovetail_8527	ATATAAAAATATAAAACTTTACTAAAGAAAATAGAATTGTTGAATAAGTTTGGAAACATCATATTCCCAGATGTGAAATCCTGATTATAAAACTGTCAGTTCTCCCCCAATTAATCTATAAATTCAATACAGTCCCATCTACACAAGATTTTTACTTAATCAATTGATTCTAAAATTCATCTAGAAGAGGAAAACCACAAGAATAACCCAGAAATATCTGAAAAAGAACAATAAGAAAGAAGTTGTTCTACCGGATCAAAACATACTTTGTATGATATTCATGCTGAAATAGGTGAATAGATCAGTGGATCAGAATAACGAATCCAAAGCCACACCTATCTACTTGTAGAAAATCAATAGATCCTAAGTGTGGTCTTTAAGAGAGTAAAGAATGAACTAATCAATAAATGGTATAGGGTCCACTGAATACACATTTGAAAAAAAAAATTAGAAGCCTACCTCCCAGCAGATATCAATCTCAGATGGATTAAGGAGATAAACATTTTTAAACTGTATGAAAACCCATAAAGGTCTAAGAAAAAAATATAGGAAAATAGTTTTATAATCTTGGAAAGACATTCTTAAGATAAACACAAAATTCTGAAGCCATGAAGGTAGTGATCAGACAGACCTAACCTACAAATAACAAAAACTTCTACACAACAGAAGACATCAAAAACAACAAGCTGAAAGGAATTACCATATACAGCAGGGGTCTCCAACCCCCAGGCCACAGACCTGTACCAGTCCATGGCCTGTTAGCAACCAGGACGCACAGTAGGAGGTAAGTGGTGGGCAAGCAAACTTCAACTGAATTTACAGCCACTTCCCATCACTGGCATTACCACCTTGAGTTCCACCTCCTGTTAGATCAGGGGTAGCATTAGATTCTCATAGGAGCACAAACCCTATTGTGAACTGCACATGCAAGGGATCTAGATTGTGGCTCCTTTTGAAAATCTAATGCCTGAGGATCTGTCACTGTCTCTCATCACCCCCAGATAGGACCATTTAGTTGCATGAAAACAAGCTCAAGGCTCCCACTGATTCTACATTATGGTGAGTTGTATAATTATTTCAT	A	20	PASS	ClusterIDs=HG3_Ill_Krunchall_15527:HG2_PB_pbsv_11543:HG2_10X_allpass_1887:HG3_PB_assemblyticsfalcon_3188:HG3_PB_pbsv_11259:HG2_Ill_tnscope_1303:HG4_PB_SVrefine2Falcon1Dovetail_7013:HG3_PB_SVrefine2PBcRDovetail_5404:HG3_PB_SVrefine2Falcon1Dovetail_6966:HG3_Ill_SVrefine2DISCOVARDovetail_8527:HG3_Ill_GATKHCSBGrefine_7712:HG3_10X_allpass_2293:HG2_PB_SVrefine2Falcon1plusDovetail_1424:HG2_Ill_GATKHCSBGrefine_7816:HG2_10X_SVrefine210Xhap12_8108:HG4_PB_assemblyticsfalcon_3121:HG2_Ill_SpiralSDKrefine_2075:HG3_Ill_MetaSV_627:HG2_Ill_MetaSV_642;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8108:HG2_Ill_GATKHCSBGrefine_7816:HG2_PB_SVrefine2Falcon1plusDovetail_1424:HG3_10X_allpass_2293:HG3_Ill_GATKHCSBGrefine_7712:HG3_Ill_SVrefine2DISCOVARDovetail_8527:HG3_PB_SVrefine2Falcon1Dovetail_6966:HG3_PB_SVrefine2PBcRDovetail_5404:HG4_PB_SVrefine2Falcon1Dovetail_7013;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0239411;ClusterMaxSizeDiff=0.0239411;ClusterMaxEditDist=0.0239411;PBcalls=8;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1080;DistBack=40075;DistForward=62410;DistMin=40075;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=10:103394013-103395096;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=474.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:23:0|1:21:6:2:15:1|0:0:26:77:0:0/1:49:22:0/1:102:52:1084:.:.
chr10	103846859	HG2_Ill_MetaSV_644	CAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCGGCCTTTCTTTTTTTTTTTTTGAGACAAGTATCATTCTGTTGCCCAAGCTGGAGTGCAGGGTGTGATCAAGGCTCACTGCAGCCTTGACCTCCTGGGCTCAAGCGATCCTCCCACTTCAGCCTCTAGAGTAGCTGGGACTACAGGCATGCACCACTGTGCTCTGCTTATTTATTTATTTATTTATTTATTTATTTATTGAGACGGAGTCTTGCTCTGTCTCGCAGGCTGGAGTGCAGTGGCACGATTTCGGCTCACTGCAGCCTCCGCGTCCCGGGTTCCAGCAATTCTCCTGCCTCAGCCTCCTGGGTAGCTGGGATTACAGGCGCATGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCTGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCATCCCTTGCCCTGCTTATTAAAACAATGTATTTATTTATTTATTTTTTGTAGAGATGAGGTCTCACTATGTTGCCCAGGCTGTCTTGAATTCCTGGGCTCAAGAGATCCTCCTGCCTCACCTTTCAAAATGCTGGAATTATAGACGTGAGGTACTGCGGCCGGCCTTTGCTCTGCTGCTCTTCCTGTCCAGCCTCAGCTGTCTGGCTGCTACCTGTGCAGGTTCTGCAGGGGCTGTGTGTTCCCTCAGCCCATTTCCCAGCACCACCTGCCTGCTTGCTTCCTGCTGGTCATGACTGGGCTCCTGCTATACATTAGCCTTCCCCTACCCAGAGCCCACCCCTCCTCTCTAAAAACTGATCCCTCAGGCCAAGAGCCACCTCTGGTCTCCTCAGGAAGATCCTAACCTGTAACCCCTCCATACCTTGTGAGTCTTGTTCCCCGCCTGGGCTATCCTTGCCCCATTCCTCTGAGAACCATTCCCTTTCATTACCCAGTACTCCCCAAATCCAATCCTGCCCATACTCTGCCTCCTCTCTCATCTGCCCCGATCCCTCTTCCATTTTCCTCTCTCCCATCCTTGACTCCTTCACCTCCATCATCCTCTCCTAACTTCCCGCCCTCCACTTGTCCCTTACCCCATTTTCCTCTCCTGACTCTACTCTTCTCCCCATTCTGACCCAGCCTTGAGTTCCCTAAGCCCCTCCCTCCTGCCTTATTTCCCCATAGACTGGAACATCTGCTGCTTCATAAGCAATGGGGAGCTGTATGAGGCCATTTTCTACAGCGGCCTTTTCCTCAGGAACAACACATATGACCTTCACTCCTTCCTTAAGTTCATCCTCTAGGTGTAGAGGGGGACTTGACTCTTCCTCCACCCCTGGGAATTTCCCTCTTTTCCCCCAGCTCAGCTCTACTCATACCCCTATTCCAGAATCCCGGTCTCCCAGAGCGCCTGGGTTCACACCCACAGGAGTGTCAGATTCTAGGCTTCACAGTCCCAGGAACCAGACCCCAGCCCACCCAATCTCATTTCTCTATCCCTTCTCCCTAGGGGATTATTTCTGGGCATTTCTATCTTTGGATGGAAGCCCATCAGAAAAATCCAATCCAACCTGCTGGGTGAGGTGGAACTAGTCTTCAGTGGGACCAGAAAGGGTGGTGCTCTCTGATGGTTCATCTTTATCCTGTCTCCCCCAGACTTTAGCCCTCACCGAGGATCAACAGATGGGATTGTCCTCCATGGGCCTCAAAAGTTCATGCTAGGCCGGGCACGGTGGCTCATGCCTGTAATCCCGGCACTTCGAGAGGCCAAGGCGGGCAGATCACTTGAGATCAGGAGTTCCAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAAATTAGCCGGGTGTGGTGACAGGTGCCTGTAGTCCCAGCTACTAGGGAGGCTGAGGCAGGAGAATAGCTTGAACCTGGGAAGTGGAGGTTGCAGTGAGCCTAGATTGCACCATTGCACTCCAGCCTGGGCGACAGAGTGAGACTCTGTCACAAAAAAAAAAAAAAGTTCACGCTGGGATGCTTGTTCAAGCTGAGTTGGAGTAAGCAGTCAAGAAGAGCCTCAACAAGACTGGCTCCATGAGGATGGTTTGAGGGAGTGGATAGGGGTAGGGGTCATGGGGAGCAACCCAAAGCAGGCTCAGTAAAGAGCAGTTTGAAGCTCACACTGACATATTCAGGACCCTCTAGCTAGAAAAATAAATGCTTGGGAGGGAGGCACAGCTTTTAGGTTTAAATCTCACTTTAACCACAATGGAGTCACATCACTGGCACATTTAACTCAGGGCCAGGATAGCTATGTGCATTCAGTAAAGGGCAATTTCGTTGTAAACAGCTGGCAGGGTAAGAAGGGAGACAGCATCTCAGAGACACTAAGTGTGAGTTTAGTGATTCGAGCATTTTTTACATAACAGGGACCCTTAATGCAAGCCAACTTCAAATCTGGTGCTCAACCACTGAAACGAGCAATTTGTTCCAATGATGGACAAAAACCAGACTGAGTTGGATTTATTGAGAGGCCAGCTCTACTTATTTTATGGATGATTTAAGAAATTGCCATGGTTTGTTTTGAAAATATTCCATTTTTGACCTATGTATTGACATTAGAACCTAATCTCTTTGTACATTATAATTCTGCTTTATTTTGTGACCTTTTCTCAGTCGTTTAACCTCTGAGCCTCCATTTCCTCCTGTGTAAAATAGAGTTAGAAAAACCGGCCTTCAAGTAGCCTTGTCCTCTGCCTTTGTCTTCTGTGTTGATGCCACCTCAAGCTGGCCAGTCTCCTTGGGACCAAACAGCGTGCCTTCAATTAAGGTGCAGAGTTCTGATGGAGAGATATTTGAAGTTGAGGTGGAAATTGCCAAACAATCCGTGACTATCAAAACCATGTTGGAAGATTTGGGAATGAATGATAGAAGAGATGATGACCTAGTCATTTATCACATTTATTATTATTATTAATTTTTTTAAGTGGAGATGAGGCCTCGCCATATTGCCTAGCCTGGTCTCAAACTCCTGGGCTCAAGTGATCCTCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCAGTCCTCTCCTTGTGGTTTATTCTCTCAGTAAGTCTAGGTCCAGGTGGAGGAGGAGGAAGAATGTACCCAATTAGCCAGCACCTATTAGGCAAAGGACAGCCCCTCCTGCACCCCATCTTCATGCCAGGTTGTATCTTGATATACTGACATGGAATAGGAGGGCTTCAATGGGGTGCTTCAGGGCATCTCTGCTTTACTGCTAGCCTGGCCTACCTAACTTGCAATTTCCTAAATCATAACTCCATCCCATTCCTGATTCTTCCTGCCTCCAGTCCTCCCACCTGTCCCACTTCAGGCTTCCAACTATTCTCACTCCTGTGGGTTTTAGAGCATCCCCTGGGGCCACCTCCTGGCAGTGAACTGGCTGACCCAGGAAAGGTAGAGGAACTATTTTTTGTCTGATAGGTGGCTGGGGACAGAGAAGTCCTAGCCCCAGATCTCCCAGGGCTGCTGGGCGTATCACAATACCTAATTTTTATCGAAAGTTTATTCTGTGCCAGACACTTTCTAAATTCTCTATATCAGTTCATCCTCCTAACAACCCTCTAAAACAAATGCTATTATTATCTCCACTTTAGACAGAAGGAAGTAAGGTCAAAGAGGTTAAATAACTTGCTCAGGGTTAGCCGTCTATAATCCCGGTTGGGCAAGGATTCAAAATAGGGGTGTCTATTGCAGGAGCCTGTCCTCTGAACCACAGTGCTGTGATTCCTCTGGGGATCCCCATTTGAGTTCATGGCACTGGCATCCTTCCAGTTCCTTCAAACATCAGCATTGCCATCCATCCTTCCCACCACTCACCACCTATGACTCAGTAAGGAATAGAATTGTATCCATTCCTCTCTTTTCTTCCCCAGGCCCAACACAAATGCCCTAATTCAGGTCTTTTTTTACTTCCTATCAGGATTCTTTTTTTTTTGAGATGGAGTTGGAGTCTTGCTCTGTCGCCAGGCAGGAGTGCAGTGGCCCTATCTCGGCTCACTGCAACCTCTGCCTCCTAGGTTCAAGTGATTCTCCTACCTCAGCCTTCTGAGTAGCTGGGATTACAGGTTCATGCCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGGCGAGGTTTCACCTTGTTGGCCAGGCTGTTCTCGAACTCCTGACCTCAAGTGATCCACGCACCTCAGCCTCTTAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCCGATCAGGATTCTTGGTCTTTTATGGTTATTATTTGTTACTATAAAGATGGCCTGGGCCAGGAGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGAGGATCGCTTCAGCCCAGGAGTTCAAGGCCAGCTTGGGCAACATAATGAGATCCCATCTCTATTTTACATATATTAGCCAAGTGTGGTGGCTTACACCTGTAGTTCCAGCTGCTAGGGAGGCCGAGGCTGGAGGACTGATTGAGCCTGGGAGGTCAAGGCTGCAGTGAACTGTGATCGTGCCACTACACTCCAGCCTGGGTGACAGAAAAAGACCCTGACGAAGAAAAAAAAAAGTAAAAGGAAAAATGATATTTATTGTATTTATTTATTTATTGAGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTACAATCTCAGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCCATTCTCTTGCCTCAGCCTCCTGAATAGCTGGGATTACAGGTGCGTGCCACCACACCAGGCTAATTTAATTTTTTTTTTAGTAGGGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCCAACTCCCAGCCTCAAGTGATCTGCCCACCTCCACCTTCCAAATTCTGGGATTACAGGCGTGAGCCACCTCACCCAGACAAATATGATATTTAAAAAGGTAGCATGAGTGCATTAAAGGAAGCTTGACAAATAGGCAAAAATCCAACTAGAGCCCAATCCTCTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCAGGCTGGAGTACAGTGGCGCCATCTCAGTTCACTGCAACCTCCGCCTCCCGGGTTCAAGCGATTCCCCTGCCTCAGCCTCCGGAGTAGCTGGGACTATAGGCAGGCACCACCACGTCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCGCCCACCTTGGCCTCCG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_5566:HG2_Ill_Krunchall_15840:HG4_10X_allpass_2212:HG2_10X_allpass_1888:HG2_PB_HySA_20934:HG4_Ill_MetaSV_664:HG2_Ill_MetaSV_644:HG2_Ill_tnscope_1304:HG2_PB_pbsv_11548:HG2_Ill_SVrefine2DISCOVARplusDovetail_1657;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_MetaSV_644:HG4_Ill_MetaSV_664;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0226116;ClusterMaxSizeDiff=0.0226116;ClusterMaxEditDist=0.025815;PBcalls=3;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=-5358;DistBack=50803;DistForward=693;DistMin=693;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=296;REFWIDENED=10:103846605-103852258;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:43:34:./.:34:5:5:8:0|1:49:0:0:20:0/1:44:9:0/1:370:201:5392:.:.
chr10	105053143	HG2_PB_SVrefine2Falcon2Bionano_5572	ATTTGGCCAGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTAGGCAGATCACGAGGTCAAGAGATAGAGACCATCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGTATGGTGGCGCACGCCTGCAGTCACAGCTACTTGTGAGGCTGAGACAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCGGGCCACTGCACTCCAGCCTGGTGACAGAGCAAGACTCCATCTCAAAAAAACGAAACAAAAAACAAACCCACTGGTAGGAAATTTATGGAACTATCAGAAAAATATAATCATGAACGTCTCATACACTTTCTGCTCCAGCTGAGACCACTGTGTATAGCCACCCTGGGTCAATCCCCGTTAGAAGGAATCCCATTAGGAAAACATAAACCAGATCTAATAAGAGTATTGATTTCAGCTAGGCGTGGTGGCTTATGCCTGTAATCCCAGCGCTTTCGGAGGCCAAAGCGGGTGGATCACCTGAGGTCAGGGGTTCAAGATCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAGAAATATAAAAATATTAGCCAGGCATGGTGGGGGACACCTGTAATCCCACCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGCGGAAGTTGCAGTGAGCCAAGATCATGCCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCCGTCTCAAAAAAAAAAAAAAAAAACGAAAAAAAAGAGTATTGATTTCAAAACAGAGCCCAAAGAAAAAGCCAGAAATCTCTCTGGATGTAAATGGGTTTAAACACACACACACACACACACACACACACACACACACACACACGCACGCAGAGCTGGAAATGTTGCTTACTTATAAGTACCATCACTAAATTTCAACTAATATTATTTTTATTATTATATCATCAGATGTCTCTAAGTTCCTGAAAAACACCTAAATTGTAGGAATACTTTTATTTT	A	20	PASS	ClusterIDs=HG3_Ill_MetaSV_630:HG3_10X_allpass_2295:HG3_Ill_Krunchall_15535:HG2_PB_pbsv_11557:HG3_PB_HySA_17462:HG3_PB_pbsv_11267:HG2_Ill_SpiralSDKrefine_2083:HG2_10X_allpass_1891:HG2_Ill_MetaSV_646:HG2_Ill_tnscope_1306:HG4_PB_SVrefine2Falcon1Dovetail_7025:HG3_PB_SVrefine2PBcRDovetail_5410:HG2_PB_SVrefine2PBcRplusDovetail_1372:HG2_PB_SVrefine2Falcon2Bionano_5572:HG2_Ill_SVrefine2DISCOVARplusDovetail_1664:HG2_10X_SVrefine210Xhap12_8117:HG2_PB_HySA_20949;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8117:HG2_Ill_SVrefine2DISCOVARplusDovetail_1664:HG2_PB_SVrefine2Falcon2Bionano_5572:HG2_PB_SVrefine2PBcRplusDovetail_1372:HG3_PB_SVrefine2PBcRDovetail_5410:HG4_PB_SVrefine2Falcon1Dovetail_7025;NumExactMatchSVs=6;ClusterMaxShiftDist=0.180027;ClusterMaxSizeDiff=0.180027;ClusterMaxEditDist=0.180027;PBcalls=8;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-1028;DistBack=14482;DistForward=-741;DistMin=-741;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=291;REFWIDENED=10:105053144-105054462;PctSeqSimilarity=0.9861;PctSizeSimilarity=1;PctRecOverlap=0.9796;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=98;MatchId=476.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:25:0|1:19:1:0:24:./.:3:22:28:0:0/1:48:14:0/1:101:37:.:.:.
chr10	105460776	HG3_Ill_manta_2663	CACCATCCATCCATCCATCCATCCACCATCCATCCATCCATCCATCATCCATCCATCCATCCATCATCCATTTACCATCTATCCATCT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_14586:HG2_PB_HySA_20953:HG4_PB_pbsv_11570:HG2_PB_pbsv_11559:HG3_PB_pbsv_11270:HG3_Ill_manta_2663:HG2_Ill_SpiralSDKrefine_2087:HG2_Ill_250bpfermikitraw_15490;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14586:HG3_Ill_manta_2663:HG2_Ill_SpiralSDKrefine_2087:HG2_Ill_250bpfermikitraw_15490;NumExactMatchSVs=4;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.133333;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-87;DistBack=61384;DistForward=-34;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=466;REFWIDENED=10:105460698-105461250;PctSeqSimilarity=0.9015;PctSizeSimilarity=0.8621;PctRecOverlap=0.7614;SizeDiff=12;StartDistance=-21;EndDistance=-9;GTMatch=0;TruScore=84;MatchId=477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:8:35:1/1:2:7:0:5:./.:115:114:162:158:1/1:0:15:./.:.:.:.:.:.
chr10	107252998	HG4_PB_pbsv_11579	GAGGGAGCAGAGATCCAAAGATTAAGGAATTTGTCTAAGAACAGTGGATTTGTGGCAGAGTTGGGACTTAACCTCAGATTAGCATAACACAAAGCCCATCTCACTATACCAACTTCTTTCAGTGTTTGGCTGGCAGAAGGAGCAATGTTGCATGGGAGTGAAGACACTCTCTGTGTCTGTATGAAGATATAATTGGAGGATCATTTAAAGTCAGAGAAGGCCTCATCTGGGTGTTTTGAGAACTCTTTATGGAAAAAAAAAGTTAAACCAAAGGTAGAAAATCCTCTGCTAACTCACTGAGAGTTTATAGGAAGAAGTGAAAAGTGCCTAGATGTGCCGCTACAACCATGAGTC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8124:HG2_PB_assemblyticsfalcon_3267:HG4_PB_assemblyticsfalcon_3161:HG2_PB_assemblyticsPBcR_3185:HG4_Ill_Krunchall_16144:HG2_PB_SVrefine2PBcRplusDovetail_1379:HG2_Ill_Krunchall_15864:HG4_PB_HySA_16868:HG4_Ill_Spiral_946:HG2_PB_HySA_20980:HG2_Ill_Spiral_805:HG4_PB_HySA_16867:HG4_Ill_MetaSV_671:HG2_Ill_tnscope_1308:HG4_PB_pbsv_11579:HG4_PB_SVrefine2PBcRDovetail_5822:HG4_Ill_svaba_14507:HG4_Ill_scalpel_10690:HG4_Ill_manta_2774:HG4_Ill_SVrefine2DISCOVARDovetail_8335:HG4_Ill_GATKHCSBGrefine_8047:HG4_Ill_Cortex_441:HG4_10X_allpass_2217:HG3_PB_assemblyticsfalcon_3223:HG3_PB_SVrefine2Falcon1Dovetail_6987:HG3_Ill_Cortex_455:HG2_PB_pbsv_11567:HG2_PB_SVrefine2Falcon1plusDovetail_1441:HG2_Ill_svaba_14437:HG2_Ill_breakscan11_1666:HG2_Ill_SpiralSDKrefine_2101:HG2_Ill_SVrefine2DISCOVARplusDovetail_1671:HG2_Ill_MetaSV_651:HG2_Ill_GATKHCSBGrefine_7829:HG2_Ill_Cortex_1037:HG2_10X_allpass_1893;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8124:HG4_PB_pbsv_11579:HG4_PB_SVrefine2PBcRDovetail_5822:HG4_Ill_svaba_14507:HG4_Ill_scalpel_10690:HG4_Ill_manta_2774:HG4_Ill_SVrefine2DISCOVARDovetail_8335:HG4_Ill_GATKHCSBGrefine_8047:HG4_Ill_Cortex_441:HG4_10X_allpass_2217:HG3_PB_assemblyticsfalcon_3223:HG3_PB_SVrefine2Falcon1Dovetail_6987:HG3_Ill_Cortex_455:HG2_PB_pbsv_11567:HG2_PB_SVrefine2Falcon1plusDovetail_1441:HG2_Ill_svaba_14437:HG2_Ill_breakscan11_1666:HG2_Ill_SpiralSDKrefine_2101:HG2_Ill_SVrefine2DISCOVARplusDovetail_1671:HG2_Ill_MetaSV_651:HG2_Ill_GATKHCSBGrefine_7829:HG2_Ill_Cortex_1037:HG2_10X_allpass_1893;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0198582;ClusterMaxSizeDiff=0.0198582;ClusterMaxEditDist=0.0198864;PBcalls=13;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=3;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-353;DistBack=120837;DistForward=5486;DistMin=5486;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=10:107252999-107253355;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:27:0|1:18:1:1:22:0|1:59:0:0:13:0/1:35:30:0/1:33:7:.:.:0.958573
chr10	107887953	HG3_Ill_SVrefine2DISCOVARDovetail_8544	CCTCCTGGGCCCAAGTGATCCTCCTGCCTCAGCTTCCAGAATAGCTTGAACTACAGGCACACATCACCCAGCTAATTTTCATATATATATTTTTTTTTTGTAGAGATAGATAGGGTCTTGTTATGTTGTCCAGGCTGATCTCAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8126:HG2_PB_pbsv_11569:HG3_10X_allpass_2297:HG3_PB_pbsv_11280:HG4_PB_pbsv_11580:HG4_PB_SVrefine2PBcRDovetail_5823:HG4_PB_SVrefine2Falcon1Dovetail_7035:HG3_PB_SVrefine2Falcon1Dovetail_6988:HG3_Ill_SVrefine2DISCOVARDovetail_8544:HG2_PB_SVrefine2Falcon1plusDovetail_1442:HG2_Ill_SVrefine2DISCOVARplusDovetail_1674;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8126:HG4_PB_SVrefine2PBcRDovetail_5823:HG4_PB_SVrefine2Falcon1Dovetail_7035:HG3_PB_SVrefine2Falcon1Dovetail_6988:HG3_Ill_SVrefine2DISCOVARDovetail_8544:HG2_PB_SVrefine2Falcon1plusDovetail_1442:HG2_Ill_SVrefine2DISCOVARplusDovetail_1674;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0209059;ClusterMaxSizeDiff=0.0209059;ClusterMaxEditDist=0.0350877;PBcalls=7;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-144;DistBack=15926;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=179;REFWIDENED=10:107887954-107888276;PctSeqSimilarity=0.9774;PctSizeSimilarity=0.9931;PctRecOverlap=0.3931;SizeDiff=1;StartDistance=-88;EndDistance=-87;GTMatch=0;TruScore=78;MatchId=479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:21:0|1:11:0:2:12:./.:0:0:0:0:0/1:40:6:./.:.:.:.:.:.
chr10	107950682	HG4_PB_SVrefine2Falcon1Dovetail_7037	TTGTTGTTCAAAGTCAGTACCTCAAATTGGAAGCATCAGTATCATCTGAGAGTTTATTAGCAATTCAGAATCTCAAGCCCCTCTCCAGACTTACTGAATCAGAATACGCATTTTAACAGGATTTCCAGGCCATCTGTAGGCACATTTAAAAGATACAGATGCTTGGGTTCCATCCTCAGAGATTCCCATTTAATTATTCTGAGATGAGGCCTAGGCAGTGGTTAATCATCATCATTACCTGGGCAGGTGTTAAATGTAAATCTTATGTGAAGGAATGCACATGTTAATTACTCAGTTTAGCTATTTTATAATGTATACATGTTTCAAAATGTCATGTTGCATACAATAAACATATGCAATAAAAGAAAAATATATAAATCATTGGATCTCACACCAGCTGAATCAGAAACTCTGGATGTGGGGCCCAGGAATCTGTGTTTTAACAAGCAATACAGGTGATTCTTAGGATGCCAGAGTTTGAAAACTCTTGCTCAGGGGAATACGCCAAATTTATCAATATATTCACAATCTATTTCTGACAGTTTTGGGTCAGGGATGGGCTTATAACGCAGACCTCCGCCATTGTAACTATCAGGGATAGATATGAAACTGAATGTGGTAAATTTATTGAAACAAACATTTCTTTTGTCTAAATATGAACTAAGATGCATGTAACTCAAGAGCAATGCCAACCTGCAGTCAACATGAGGAAAGCCAGCCTGAGAAATGAAACTATACCTCTGGTGTCAAGGATAGATAACCCTCTGGGTCTTAACTATTCCTGAAGCTTGCCCTATCTCCTGACTTCCATTTACATAAGCTAATGAATTCCCTTGTAAATTAAGCTGGTTTGAGTAGGCTTGGAACACAGAAAATACTGGTGTTAAAGAATTTCACATATCCAATGGAAAAAC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1309:HG3_PB_assemblyticsfalcon_3227:HG2_PB_assemblyticsfalcon_3270:HG4_Ill_Krunchall_16148:HG3_Ill_Krunchall_15553:HG2_Ill_Krunchall_15870:HG4_PB_assemblyticsfalcon_3163:HG2_PB_assemblyticsPBcR_3190:HG4_10X_allpass_2218:HG4_PB_pbsv_11582:HG4_PB_SVrefine2PBcRDovetail_5825:HG4_PB_SVrefine2Falcon1Dovetail_7037:HG4_Ill_manta_2776:HG4_Ill_SVrefine2DISCOVARDovetail_8338:HG4_Ill_MetaSV_673:HG4_Ill_GATKHCSBGrefine_8049:HG3_PB_pbsv_11282:HG3_PB_SVrefine2PBcRDovetail_5419:HG3_PB_SVrefine2Falcon1Dovetail_6990:HG3_Ill_manta_2665:HG3_Ill_SVrefine2DISCOVARDovetail_8546:HG3_Ill_MetaSV_637:HG3_Ill_GATKHCSBGrefine_7734:HG3_10X_allpass_2298:HG2_PB_pbsv_11571:HG2_PB_SVrefine2PBcRplusDovetail_1381:HG2_PB_SVrefine2PB10Xhap12_8366:HG2_PB_SVrefine2Falcon2Bionano_5579:HG2_PB_SVrefine2Falcon1plusDovetail_1444:HG2_Ill_manta_3271:HG2_Ill_SpiralSDKrefine_2105:HG2_Ill_SVrefine2DISCOVARplusDovetail_1676:HG2_Ill_MetaSV_653:HG2_Ill_GATKHCSBGrefine_7833:HG2_10X_allpass_1894:HG2_10X_SVrefine210Xhap12_8128:HG2_Ill_breakscan11_1667:HG2_PB_HySA_20990;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8128:HG2_10X_allpass_1894:HG2_Ill_GATKHCSBGrefine_7833:HG2_Ill_MetaSV_653:HG2_Ill_SVrefine2DISCOVARplusDovetail_1676:HG2_Ill_SpiralSDKrefine_2105:HG2_Ill_manta_3271:HG2_PB_SVrefine2Falcon1plusDovetail_1444:HG2_PB_SVrefine2Falcon2Bionano_5579:HG2_PB_SVrefine2PB10Xhap12_8366:HG2_PB_SVrefine2PBcRplusDovetail_1381:HG2_PB_pbsv_11571:HG3_10X_allpass_2298:HG3_Ill_GATKHCSBGrefine_7734:HG3_Ill_MetaSV_637:HG3_Ill_SVrefine2DISCOVARDovetail_8546:HG3_Ill_manta_2665:HG3_PB_SVrefine2Falcon1Dovetail_6990:HG3_PB_SVrefine2PBcRDovetail_5419:HG3_PB_pbsv_11282:HG4_Ill_GATKHCSBGrefine_8049:HG4_Ill_MetaSV_673:HG4_Ill_SVrefine2DISCOVARDovetail_8338:HG4_Ill_manta_2776:HG4_PB_SVrefine2Falcon1Dovetail_7037:HG4_PB_SVrefine2PBcRDovetail_5825:HG4_PB_pbsv_11582;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0163132;ClusterMaxSizeDiff=0.0163132;ClusterMaxEditDist=0.0163132;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-913;DistBack=17530;DistForward=7267;DistMin=7267;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=10:107950683-107951597;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=480.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:96:1/1:0:27:0:9:1/1:0:16:0:20:1/1:0:45:1/1:3:59:.:.:.
chr10	107997186	HG4_Ill_GATKHCSBGrefine_8050	CATATATATATATATATATATATATATATACGTATATATATATATACATATACATATATATATATACGTATATATATATATACACATATATATATATATATACAT	C	20	PASS	ClusterIDs=HG2_PB_HySA_20992:HG4_Ill_Krunchall_16150:HG3_Ill_Krunchall_15555:HG4_PB_HySA_16876:HG4_PB_pbsv_11583:HG4_Ill_scalpel_10691:HG4_Ill_GATKHC_18663:HG4_Ill_GATKHCSBGrefine_8051:HG4_Ill_150bpfermikitraw_14777:HG2_PB_pbsv_11572:HG2_PB_assemblyticsfalcon_3272:HG2_Ill_scalpel_10991:HG2_Ill_GATKHC_18635:HG2_Ill_GATKHCSBGrefine_7835:HG2_Ill_250bpfermikitraw_15510:HG2_Ill_150bpfermikitraw_14608:HG3_Ill_scalpel_11162:HG3_Ill_GATKHC_18542:HG3_Ill_GATKHCSBGrefine_7736:HG3_Ill_250bpfermikitraw_15085:HG3_Ill_150bpfermikitraw_14630:HG3_PB_HySA_17488:HG3_PB_pbsv_11283:HG4_Ill_manta_2777:HG4_Ill_SVrefine2DISCOVARDovetail_8339:HG4_Ill_MetaSV_674:HG4_Ill_GATKHC_18662:HG4_Ill_GATKHCSBGrefine_8050:HG3_Ill_manta_2666:HG3_Ill_SVrefine2DISCOVARDovetail_8547:HG3_Ill_MetaSV_638:HG3_Ill_GATKHC_18541:HG3_Ill_GATKHCSBGrefine_7735:HG2_PB_SVrefine2Falcon2Bionano_5580:HG2_Ill_scalpel_10990:HG2_Ill_manta_3272:HG2_Ill_SpiralSDKrefine_2107:HG2_Ill_SVrefine2DISCOVARplusDovetail_1677:HG2_Ill_MetaSV_654:HG2_Ill_GATKHC_18634:HG2_Ill_GATKHCSBGrefine_7834:HG2_10X_SVrefine210Xhap12_8129:HG2_Ill_breakscan11_1668:HG2_PB_SVrefine2PBcRplusDovetail_1382:HG3_PB_SVrefine2Falcon1Dovetail_6991:HG3_PB_SVrefine2PBcRDovetail_5420;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8129:HG2_Ill_GATKHCSBGrefine_7834:HG2_Ill_GATKHC_18634:HG2_Ill_MetaSV_654:HG2_Ill_SVrefine2DISCOVARplusDovetail_1677:HG2_Ill_SpiralSDKrefine_2107:HG2_Ill_manta_3272:HG2_Ill_scalpel_10990:HG2_PB_SVrefine2Falcon2Bionano_5580:HG3_Ill_GATKHCSBGrefine_7735:HG3_Ill_GATKHC_18541:HG3_Ill_MetaSV_638:HG3_Ill_SVrefine2DISCOVARDovetail_8547:HG3_Ill_manta_2666:HG4_Ill_GATKHCSBGrefine_8050:HG4_Ill_GATKHC_18662:HG4_Ill_MetaSV_674:HG4_Ill_SVrefine2DISCOVARDovetail_8339:HG4_Ill_manta_2777;NumExactMatchSVs=19;ClusterMaxShiftDist=0.333333;ClusterMaxSizeDiff=0.333333;ClusterMaxEditDist=0.333333;PBcalls=11;Illcalls=34;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=15;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-104;DistBack=-45;DistForward=-77;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=10:107997185-107997308;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:57:1/1:1:29:2:26:0|1:21:1:0:8:0/1:17:22:./.:.:.:.:.:.
chr10	108030317	HG2_PB_SVrefine2PBcRplusDovetail_1383	ACTCCAAACTATCTATGATAGACCAGGAATTTGATGGGAATCCCACTGCCTTCCTGGAAAAGCTAAGGGGGGCCTTGGTAAAACACATGTCTCTATCTCCTGATTCAGTCAAGGGACAATTAATTTATTACTCAGGGAGGCCCTGATATCAGGAGAAAGCTGCAGAAACAGGTCATGGGACAAGACAGTGCTTTACAGAACCTCCTGAAAGTGGCCATCTAGGACTTTTACAATAGAGATAGAGAGGAGGCCCAGGAGAGAGAGGAGACACAAGAAAAAGGCAGAGGCTTTAATGGCCTCGTTTCAGGCCCACAAGCTCCAGAATCCCTGGAATGCACCTACCAACTGCTACAAATGTGGCAAGCCATGGCATTTTAGTAAAGACTGTCCTGACAGCATGAGGGAGCCACCTCGACCCTGTCCAATCTGTAATGGGGACCACTGAAGGGCGGACTGTCCCTGGAGATGCAGGTCACCAAGTCCAGAGCCAGTCTCACAAATGGTCCAGCAAGACCAACAGGTTCCAGGGCTCCTCTCCCTGGCTCCAATGGTCCAGATGACCATTACCATACAGGAGCCTCCAGGTGATTCTGGTAATTGAAGGGAGGAAGGTGGACCTCCTCCTGGACACCAGAGTGGACCTTTCGGTTCTCTCCAACCAGGGTCCCCCATCCTCTCTTAGCACAACCATGAGGCACGTCTCAGGGAAGTTGTTAACCTGATATTTTTCCTAACCCCTTAGTTGTAGATGAGGAAACCTCTTTTTCACCCATGCCTTTCTAATGATGCCTGAAAGCCCAACTCCTTTGTTGACCAGGGATATTCTGGCCCGTATGGGGACCACATCCTGATGGCCCCAGGACAAACTATTTGTCTCCCCCTAGTGGAGACCAATATTAACACAGAAGTTTGGGCAATTCAAGGTAAAATTGGCCAAGCTATAACCCCCATACTGGTCCAGATCCCCCTTAAGGGTCCCAACCTCCTTTCCACCAGAGACAACATCCCCTGAAACCAGAAGTTGGGAAAGGACTAGAAGCCATCATTGATAACTTGAAGATGCAACGCCTGCTCAAACCCTACAATAGTCCTTGTAATACCCCGATATTGAGGGTACAAAAACCCAACAGGGAATGGAGACCAGTCCAGAACTTCTGCCTCGTTAATGAGGCTGTGGACCCAATTCACCCAGTGGTTCCCAATCTGTATACCCTGATAACTCAAATACCTGAGGGAACTAAATGGTTCACAGTCCTGGACATAAAGAATGCCTTTTTCTGCATACAATTACACACTGACTCCCGGTATTTGCATTTGAGGATCCCTCCAACCAGACCACCCAGCTAACCTGGACAGTGTTACCTCAGGGATTCTGCAACAGCCCCCACCTATTTGGGCAGGCATTGTCCAAAGACCTCTCTGAGTTCCTTTATCCTCAGGTTAAAGTTTCACAATTAGTAGATGACATTCTCCTCTGTGCCTCAACTGAGGAACTCTCTCAGGAGGTCAGTAAGGCTCTTCTTAATTTTCTAGCTAACAGAGAACACAAGGTTTCAAAATCTAAAGCTCAGCTCTGTCAGACTTCAGTGAAGTACCTAGGGCTGGTCTTGTCAGAGGAGACCAGGGCATTGGGTGAAGAAAGGATTAAGCCCATCTCTTCTTTCCCCTCCCCCAAACCCTTAAGCAACTGAGGGGATTCTTGGGCATTACAGGATTCTGCAGACTATGCATACCTGGGTACAGTGATATGGCTCATCCCTTATATCACCTAATAAAGGAGACTCAGGCATCTAAAACTCATTCCCTAACTTGGGAACCAGAGGCTAAAAAGGACTTTGACCAATTAATACAAGCCTTGCTCGAGGCACCAGCCCTTAGTCTTTCCATAGGGAAGACATTTAATCTTTATGTGTCAGAAAGAAAGGGAATGACCCTGGGAGTTCTAATCCAGGCCTGAGATCCAGCCCAGCAGCCTGTAGGCTAAGTAAGGAGCTTGATTTAGTAGCTAAAGGATGGCTGGCCTGCCTCCGGGCAATTGCAGTGGTAGTCTTGCTGGTACTAGAGGCTATTAAGTTAATCATGGAGAATAACTTAAGTGTTTATACCCCACATAATGTGGCAGGACTGCTGTCTTCTAAGGGGAGTCTCTGGCTAATGGATAACTGCTTCCACAGATATCAAGCTCTGCTATTACAGAGATCTGCAGGCCAATTAAGAACGTGTCC	A	20	PASS	ClusterIDs=HG3_Ill_MetaSV_639:HG4_PB_pbsv_11584:HG2_Ill_GATKHCSBGrefine_7837:HG3_10X_allpass_2299:HG2_Ill_Krunchall_15874:HG4_PB_assemblyticsfalcon_3170:HG2_PB_assemblyticsPBcR_3194:HG3_PB_assemblyticsfalcon_3231:HG2_Ill_tnscope_1310:HG4_PB_SVrefine2PBcRDovetail_5826:HG4_Ill_SVrefine2DISCOVARDovetail_8340:HG2_10X_SVrefine210Xhap12_8131:HG2_10X_allpass_1895:HG4_Ill_MetaSV_675:HG2_Ill_MetaSV_655:HG4_PB_SVrefine2Falcon1Dovetail_7038:HG3_PB_pbsv_11284:HG3_PB_SVrefine2PBcRDovetail_5421:HG3_PB_SVrefine2Falcon1Dovetail_6992:HG3_Ill_SVrefine2DISCOVARDovetail_8548:HG3_Ill_GATKHCSBGrefine_7737:HG2_PB_pbsv_11573:HG2_PB_SVrefine2PBcRplusDovetail_1383:HG2_PB_SVrefine2PB10Xhap12_8367:HG2_PB_SVrefine2Falcon2Bionano_5581:HG2_PB_SVrefine2Falcon1plusDovetail_1445:HG2_Ill_SpiralSDKrefine_2108:HG2_Ill_SVrefine2DISCOVARplusDovetail_1678:HG2_10X_SVrefine210Xhap12_8130:HG4_Ill_Krunchall_16153:HG2_Ill_Krunchall_15873:HG4_10X_allpass_2219;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8130:HG2_Ill_SVrefine2DISCOVARplusDovetail_1678:HG2_Ill_SpiralSDKrefine_2108:HG2_PB_SVrefine2Falcon1plusDovetail_1445:HG2_PB_SVrefine2Falcon2Bionano_5581:HG2_PB_SVrefine2PB10Xhap12_8367:HG2_PB_SVrefine2PBcRplusDovetail_1383:HG2_PB_pbsv_11573:HG3_Ill_GATKHCSBGrefine_7737:HG3_Ill_SVrefine2DISCOVARDovetail_8548:HG3_PB_SVrefine2Falcon1Dovetail_6992:HG3_PB_SVrefine2PBcRDovetail_5421:HG3_PB_pbsv_11284:HG4_PB_SVrefine2Falcon1Dovetail_7038;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0729483;ClusterMaxSizeDiff=0.0729483;ClusterMaxEditDist=0.0729483;PBcalls=14;Illcalls=13;TenXcalls=5;CGcalls=0;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2224;DistBack=10224;DistForward=-2225;DistMin=-2225;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=10:108030318-108032545;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=482.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:108:1/1:0:22:0:41:1/1:0:38:0:20:1/1:0:29:1/1:2:112:2158:.:.
chr10	109243705	HG2_PB_SVrefine2Falcon1plusDovetail_1450	TTCGGCTTTCGATTGGAGAAGCGTAAAGTCAATTCGTGGACATGTTTTAAAAACATTATCCCACCCCAAAAATCTTCCGTGCTTTCAAGATTCTTGCATTGATAGAGATAGATACCATTTCCTAGGGCTAACCTATTTCTCCACTCATCTAAGTAC	ATTT	20	PASS	ClusterIDs=HG2_10X_allpass_1896:HG3_PB_HySA_17494:HG3_PB_SVrefine2PBcRDovetail_5424:HG3_Ill_manta_2668:HG2_PB_assemblyticsfalcon_3286:HG2_PB_SVrefine2Falcon1plusDovetail_1450:HG2_Ill_manta_3275:HG2_10X_SVrefine210Xhap12_8135:HG2_Ill_SpiralSDKrefine_2112:HG2_Ill_MetaSV_657:HG3_Ill_Spiral_12142:HG2_Ill_Spiral_806:HG2_Ill_scalpel_11003:HG3_PB_pbsv_11290:HG2_PB_pbsv_11578:HG3_10X_allpass_2301:HG3_Ill_GATKHCSBGrefine_7741:HG2_Ill_GATKHCSBGrefine_7841;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8135:HG2_Ill_manta_3275:HG2_PB_SVrefine2Falcon1plusDovetail_1450:HG2_PB_assemblyticsfalcon_3286:HG3_Ill_manta_2668;NumExactMatchSVs=5;ClusterMaxShiftDist=0.310469;ClusterMaxSizeDiff=0.310469;ClusterMaxEditDist=0.310469;PBcalls=6;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-152;DistBack=0;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=10:109243705-109243860;PctSeqSimilarity=0.9968;PctSizeSimilarity=0.987;PctRecOverlap=0.9936;SizeDiff=-2;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:29:./.:36:24:3:2:0|1:37:2:1:20:0/1:34:20:./.:.:.:.:.:.
chr10	111036377	HG3_Ill_manta_2671	TAAAATTTACCTACATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGGGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_807:HG3_PB_assemblyticsfalcon_3253:HG3_PB_pbsv_11297:HG3_Ill_Krunchall_15581:HG2_PB_pbsv_11583:HG3_Ill_Krunchall_15580:HG2_Ill_Krunchall_15901:HG2_Ill_tnscope_1311:HG2_Ill_MetaSV_658:HG3_PB_SVrefine2PBcRDovetail_5428:HG3_PB_SVrefine2Falcon1Dovetail_7002:HG3_Ill_scalpel_11182:HG3_Ill_manta_2671:HG3_Ill_SVrefine2DISCOVARDovetail_8559:HG3_Ill_MetaSV_641:HG3_Ill_GATKHCSBGrefine_7745:HG3_10X_allpass_2303:HG2_PB_assemblyticsfalcon_3304:HG2_PB_SVrefine2PB10Xhap12_8371:HG2_PB_SVrefine2Falcon1plusDovetail_1453:HG2_Ill_manta_3278:HG2_Ill_GATKHCSBGrefine_7846:HG2_10X_SVrefine210Xhap12_8138:HG2_Ill_breakscan11_1669:HG3_Ill_Spiral_12156;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8138:HG2_Ill_GATKHCSBGrefine_7846:HG2_Ill_manta_3278:HG2_PB_SVrefine2Falcon1plusDovetail_1453:HG2_PB_SVrefine2PB10Xhap12_8371:HG2_PB_assemblyticsfalcon_3304:HG3_10X_allpass_2303:HG3_Ill_GATKHCSBGrefine_7745:HG3_Ill_MetaSV_641:HG3_Ill_SVrefine2DISCOVARDovetail_8559:HG3_Ill_manta_2671:HG3_Ill_scalpel_11182:HG3_PB_SVrefine2Falcon1Dovetail_7002:HG3_PB_SVrefine2PBcRDovetail_5428;NumExactMatchSVs=14;ClusterMaxShiftDist=0.1056;ClusterMaxSizeDiff=0.1056;ClusterMaxEditDist=0.1056;PBcalls=8;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=25953;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=10:111036378-111036714;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:21:0|1:25:0:0:24:0|1:59:0:0:31:0/1:33:25:0/1:24:5:.:.:.
chr10	111572110	HG2_Ill_MetaSV_659	ATAAAGCCATGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTCCTTTCTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGATTATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGTGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGCTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGTGGCTTTGAGTGAGATTCTTAATCCTGATTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTGTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGTTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCACTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGATTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGACGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGAACCCTCAGCTGCAGGTCTGCTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGGTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCAGTTCTCAGATCTCCAGCTGTGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCACTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTTGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCTCCT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1670:HG4_PB_assemblyticsfalcon_3197:HG3_PB_assemblyticsfalcon_3255:HG2_PB_assemblyticsfalcon_3305:HG2_Ill_tnscope_1312:HG4_PB_pbsv_11592:HG4_PB_SVrefine2PBcRDovetail_5830:HG4_PB_SVrefine2Falcon1Dovetail_7046:HG4_Ill_SVrefine2DISCOVARDovetail_8351:HG4_Ill_MetaSV_678:HG4_Ill_GATKHCSBGrefine_8061:HG3_PB_pbsv_11300:HG3_PB_SVrefine2PBcRDovetail_5429:HG3_PB_SVrefine2Falcon1Dovetail_7003:HG3_Ill_SVrefine2DISCOVARDovetail_8561:HG3_Ill_MetaSV_642:HG3_Ill_GATKHCSBGrefine_7748:HG2_PB_pbsv_11584:HG2_PB_SVrefine2PBcRplusDovetail_1389:HG2_PB_SVrefine2PB10Xhap12_8372:HG2_PB_SVrefine2Falcon2Bionano_5588:HG2_PB_SVrefine2Falcon1plusDovetail_1454:HG2_Ill_SVrefine2DISCOVARplusDovetail_1687:HG2_Ill_MetaSV_659:HG2_Ill_GATKHCSBGrefine_7847:HG2_10X_SVrefine210Xhap12_8139;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8139:HG2_Ill_GATKHCSBGrefine_7847:HG2_Ill_MetaSV_659:HG2_Ill_SVrefine2DISCOVARplusDovetail_1687:HG2_PB_SVrefine2Falcon1plusDovetail_1454:HG2_PB_SVrefine2Falcon2Bionano_5588:HG2_PB_SVrefine2PB10Xhap12_8372:HG2_PB_SVrefine2PBcRplusDovetail_1389:HG2_PB_pbsv_11584:HG3_Ill_GATKHCSBGrefine_7748:HG3_Ill_MetaSV_642:HG3_Ill_SVrefine2DISCOVARDovetail_8561:HG3_PB_SVrefine2Falcon1Dovetail_7003:HG3_PB_SVrefine2PBcRDovetail_5429:HG3_PB_pbsv_11300:HG4_Ill_GATKHCSBGrefine_8061:HG4_Ill_MetaSV_678:HG4_Ill_SVrefine2DISCOVARDovetail_8351:HG4_PB_SVrefine2Falcon1Dovetail_7046:HG4_PB_SVrefine2PBcRDovetail_5830:HG4_PB_pbsv_11592;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00442623;ClusterMaxSizeDiff=0.00442623;ClusterMaxEditDist=0.00442623;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-6106;DistBack=20630;DistForward=-6094;DistMin=-6094;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=10:111572111-111578230;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=485.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:106:1/1:0:26:0:27:1/1:0:26:0:31:1/1:1:35:1/1:0:458:6539:.:.
chr10	113593368	HG2_Ill_SVrefine2DISCOVARplusDovetail_1695	AGTTTCCTGCCTGGAACCCCACTCCCCACACACATTACAGACCCGGTTACG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1695:HG4_Ill_250bpfermikitraw_15449:HG3_Ill_150bpfermikitraw_14686:HG2_PB_assemblyticsfalcon_3323:HG4_PB_SVrefine2PBcRDovetail_5835:HG2_PB_SVrefine2Falcon2Bionano_5593;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1695:HG4_PB_SVrefine2PBcRDovetail_5835:HG2_PB_SVrefine2Falcon2Bionano_5593;NumExactMatchSVs=3;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0196078;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=10748;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=195;REFWIDENED=10:113593369-113593613;PctSeqSimilarity=0.994;PctSizeSimilarity=1;PctRecOverlap=0.3529;SizeDiff=0;StartDistance=-33;EndDistance=-33;GTMatch=0;TruScore=78;MatchId=486.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:./.:9:19:27:5:./.:5:1:4:0:0/1:10:2:./.:.:.:.:.:.
chr10	114157784	HG3_Ill_SVrefine2DISCOVARDovetail_8567	TACAGATCCACTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8150:HG3_10X_allpass_2306:HG2_10X_allpass_1897:HG3_PB_HySA_17533:HG2_PB_HySA_21041:HG4_PB_pbsv_11602:HG4_PB_HySA_16920:HG4_Ill_MetaSV_680:HG3_Ill_MetaSV_644:HG2_Ill_tnscope_1313:HG2_Ill_MetaSV_661:HG4_PB_SVrefine2PBcRDovetail_5836:HG4_PB_SVrefine2Falcon1Dovetail_7052:HG4_Ill_scalpel_10727:HG4_Ill_manta_2780:HG4_Ill_SVrefine2DISCOVARDovetail_8357:HG4_Ill_GATKHCSBGrefine_8078:HG4_10X_allpass_2223:HG3_PB_pbsv_11307:HG3_PB_SVrefine2PBcRDovetail_5431:HG3_PB_SVrefine2Falcon1Dovetail_7005:HG3_Ill_scalpel_11204:HG3_Ill_manta_2677:HG3_Ill_SVrefine2DISCOVARDovetail_8567:HG3_Ill_GATKHCSBGrefine_7755:HG2_PB_pbsv_11593:HG2_PB_SVrefine2PBcRplusDovetail_1395:HG2_PB_SVrefine2PB10Xhap12_8378:HG2_PB_SVrefine2Falcon2Bionano_5594:HG2_PB_SVrefine2Falcon1plusDovetail_1458:HG2_Ill_manta_3281:HG2_Ill_breakscan11_1672:HG2_Ill_SVrefine2DISCOVARplusDovetail_1696:HG2_Ill_GATKHCSBGrefine_7855;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8150:HG4_PB_SVrefine2PBcRDovetail_5836:HG4_PB_SVrefine2Falcon1Dovetail_7052:HG4_Ill_scalpel_10727:HG4_Ill_manta_2780:HG4_Ill_SVrefine2DISCOVARDovetail_8357:HG4_Ill_GATKHCSBGrefine_8078:HG4_10X_allpass_2223:HG3_PB_pbsv_11307:HG3_PB_SVrefine2PBcRDovetail_5431:HG3_PB_SVrefine2Falcon1Dovetail_7005:HG3_Ill_scalpel_11204:HG3_Ill_manta_2677:HG3_Ill_SVrefine2DISCOVARDovetail_8567:HG3_Ill_GATKHCSBGrefine_7755:HG2_PB_pbsv_11593:HG2_PB_SVrefine2PBcRplusDovetail_1395:HG2_PB_SVrefine2PB10Xhap12_8378:HG2_PB_SVrefine2Falcon2Bionano_5594:HG2_PB_SVrefine2Falcon1plusDovetail_1458:HG2_Ill_manta_3281:HG2_Ill_breakscan11_1672:HG2_Ill_SVrefine2DISCOVARplusDovetail_1696:HG2_Ill_GATKHCSBGrefine_7855;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0574887;ClusterMaxSizeDiff=0.0574887;ClusterMaxEditDist=0.0574887;PBcalls=14;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-338;DistBack=19109;DistForward=-322;DistMin=-322;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=342;REFWIDENED=10:114157785-114158464;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=487.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:47:1/1:2:25:1:19:1/1:0:21:0:17:1/1:0:44:0/1:3:18:.:.:.
chr10	116758387	HG2_PB_SVrefine2Falcon1plusDovetail_1466	GACATAAATATGTATATATGTGTATATAGACATAAATATGTATATATGTGTATATAGACATAAATATGTATATATGTGTATATAGACAT	G	10	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_5841:HG2_PB_assemblyticsfalcon_3346:HG2_PB_SVrefine2Falcon1plusDovetail_1466:HG4_PB_pbsv_11610:HG2_PB_assemblyticsPBcR_3253:HG2_PB_pbsv_11602;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1466:HG2_PB_assemblyticsfalcon_3346;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0578035;ClusterMaxSizeDiff=0.0578035;ClusterMaxEditDist=0.0578035;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-88;DistBack=-29;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=421;REFWIDENED=10:116758018-116758526;PctSeqSimilarity=0.9552;PctSizeSimilarity=0.9318;PctRecOverlap=0.7865;SizeDiff=6;StartDistance=-19;EndDistance=-13;GTMatch=0;TruScore=89;MatchId=488.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:19:0|1:22:5:2:15:0/0:16:0:7:0:0/0:21:0:./.:.:.:.:.:.
chr10	118265309	HG2_10X_SVrefine210Xhap12_8162	TTCTCATGACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_685:HG3_Ill_MetaSV_649:HG4_10X_allpass_2226:HG2_Ill_SVrefine2DISCOVARplusDovetail_1711:HG2_PB_assemblyticsfalcon_3355:HG2_PB_assemblyticsPBcR_3268:HG2_Ill_MetaSV_668:HG4_PB_assemblyticsfalcon_3246:HG3_PB_assemblyticsfalcon_3303:HG2_Ill_Krunchall_15954:HG3_Ill_Krunchall_15635:HG4_PB_HySA_16952:HG4_Ill_Spiral_947:HG2_Ill_Spiral_809:HG4_PB_pbsv_11617:HG3_PB_pbsv_11320:HG2_PB_pbsv_11607:HG4_PB_SVrefine2PBcRDovetail_5847:HG4_PB_SVrefine2Falcon1Dovetail_7064:HG4_Ill_manta_2783:HG4_Ill_SVrefine2DISCOVARDovetail_8375:HG4_Ill_GATKHCSBGrefine_8084:HG3_PB_SVrefine2PBcRDovetail_5441:HG3_PB_SVrefine2Falcon1Dovetail_7017:HG3_Ill_manta_2679:HG3_Ill_SVrefine2DISCOVARDovetail_8580:HG3_Ill_GATKHCSBGrefine_7761:HG3_10X_allpass_2309:HG2_PB_SVrefine2PBcRplusDovetail_1407:HG2_PB_SVrefine2PB10Xhap12_8393:HG2_PB_SVrefine2Falcon2Bionano_5602:HG2_PB_SVrefine2Falcon1plusDovetail_1471:HG2_Ill_manta_3285:HG2_Ill_SpiralSDKrefine_2156:HG2_Ill_SVrefine2DISCOVARplusDovetail_1710:HG2_Ill_GATKHCSBGrefine_7861:HG2_10X_SVrefine210Xhap12_8162:HG4_Ill_MetaSV_686:HG3_Ill_MetaSV_648:HG2_PB_HySA_21088:HG2_Ill_tnscope_1315:HG2_Ill_MetaSV_667;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8162:HG2_Ill_GATKHCSBGrefine_7861:HG2_Ill_SVrefine2DISCOVARplusDovetail_1710:HG2_Ill_SpiralSDKrefine_2156:HG2_Ill_manta_3285:HG2_PB_SVrefine2Falcon1plusDovetail_1471:HG2_PB_SVrefine2Falcon2Bionano_5602:HG2_PB_SVrefine2PB10Xhap12_8393:HG2_PB_SVrefine2PBcRplusDovetail_1407:HG3_10X_allpass_2309:HG3_Ill_GATKHCSBGrefine_7761:HG3_Ill_SVrefine2DISCOVARDovetail_8580:HG3_Ill_manta_2679:HG3_PB_SVrefine2Falcon1Dovetail_7017:HG3_PB_SVrefine2PBcRDovetail_5441:HG4_Ill_GATKHCSBGrefine_8084:HG4_Ill_SVrefine2DISCOVARDovetail_8375:HG4_Ill_manta_2783:HG4_PB_SVrefine2Falcon1Dovetail_7064:HG4_PB_SVrefine2PBcRDovetail_5847;NumExactMatchSVs=20;ClusterMaxShiftDist=0.293785;ClusterMaxSizeDiff=0.293785;ClusterMaxEditDist=0.293785;PBcalls=17;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=61979;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=10:118265310-118265647;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:./.:0:0:0:0:./.:0:0:0:0:1/1:0:25:1/1:2:26:.:.:.
chr10	119634274	HG3_Ill_GATKHCSBGrefine_7765	TGAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8170:HG2_PB_assemblyticsfalcon_3371:HG2_PB_assemblyticsPBcR_3281:HG4_PB_assemblyticsfalcon_3260:HG3_PB_assemblyticsfalcon_3316:HG4_Ill_Krunchall_16246:HG3_Ill_Krunchall_15650:HG2_PB_HySA_21107:HG2_Ill_Spiral_811:HG3_PB_HySA_17581:HG4_Ill_MetaSV_689:HG3_Ill_MetaSV_651:HG2_Ill_tnscope_1316:HG2_Ill_MetaSV_670:HG4_PB_pbsv_11622:HG4_PB_SVrefine2PBcRDovetail_5850:HG4_PB_SVrefine2Falcon1Dovetail_7068:HG4_PB_HySA_16961:HG4_Ill_svaba_14583:HG4_Ill_scalpel_10752:HG4_Ill_manta_2786:HG4_Ill_SVrefine2DISCOVARDovetail_8381:HG4_Ill_GATKHCSBGrefine_8089:HG4_10X_allpass_2228:HG3_PB_pbsv_11325:HG3_PB_SVrefine2PBcRDovetail_5445:HG3_PB_SVrefine2Falcon1Dovetail_7021:HG3_Ill_svaba_14689:HG3_Ill_scalpel_11235:HG3_Ill_manta_2682:HG3_Ill_SVrefine2DISCOVARDovetail_8587:HG3_Ill_GATKHCSBGrefine_7765:HG3_10X_allpass_2311:HG2_PB_pbsv_11612:HG2_PB_SVrefine2PBcRplusDovetail_1410:HG2_PB_SVrefine2PB10Xhap12_8398:HG2_PB_SVrefine2Falcon2Bionano_5605:HG2_PB_SVrefine2Falcon1plusDovetail_1474:HG2_Ill_svaba_14519:HG2_Ill_scalpel_11054:HG2_Ill_manta_3287:HG2_Ill_breakscan11_1674:HG2_Ill_SpiralSDKrefine_2162:HG2_Ill_SVrefine2DISCOVARplusDovetail_1713:HG2_Ill_GATKHCSBGrefine_7865:HG2_10X_allpass_1900;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8170:HG4_PB_pbsv_11622:HG4_PB_SVrefine2PBcRDovetail_5850:HG4_PB_SVrefine2Falcon1Dovetail_7068:HG4_PB_HySA_16961:HG4_Ill_svaba_14583:HG4_Ill_scalpel_10752:HG4_Ill_manta_2786:HG4_Ill_SVrefine2DISCOVARDovetail_8381:HG4_Ill_GATKHCSBGrefine_8089:HG4_10X_allpass_2228:HG3_PB_pbsv_11325:HG3_PB_SVrefine2PBcRDovetail_5445:HG3_PB_SVrefine2Falcon1Dovetail_7021:HG3_Ill_svaba_14689:HG3_Ill_scalpel_11235:HG3_Ill_manta_2682:HG3_Ill_SVrefine2DISCOVARDovetail_8587:HG3_Ill_GATKHCSBGrefine_7765:HG3_10X_allpass_2311:HG2_PB_pbsv_11612:HG2_PB_SVrefine2PBcRplusDovetail_1410:HG2_PB_SVrefine2PB10Xhap12_8398:HG2_PB_SVrefine2Falcon2Bionano_5605:HG2_PB_SVrefine2Falcon1plusDovetail_1474:HG2_Ill_svaba_14519:HG2_Ill_scalpel_11054:HG2_Ill_manta_3287:HG2_Ill_breakscan11_1674:HG2_Ill_SpiralSDKrefine_2162:HG2_Ill_SVrefine2DISCOVARplusDovetail_1713:HG2_Ill_GATKHCSBGrefine_7865:HG2_10X_allpass_1900;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0518293;ClusterMaxSizeDiff=0.0518293;ClusterMaxEditDist=0.0518293;PBcalls=18;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=26587;DistForward=5498;DistMin=5498;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=10:119634275-119634614;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=490.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:1/1:0:11:0:15:1/1:0:15:0:20:1/1:0:69:./.:2:18:.:.:.
chr10	120941480	HG2_Ill_150bpfermikitraw_14709	GCTGGCCGGGCGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACTGGGCGA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_11628:HG4_Ill_svaba_14594:HG4_Ill_scalpel_10759:HG4_Ill_Krunchall_16262:HG4_Ill_GATKHC_18781:HG4_Ill_GATKHCSBGrefine_8095:HG4_Ill_150bpfermikitraw_14883:HG2_PB_pbsv_11619:HG2_Ill_svaba_14529:HG2_Ill_Krunchall_15984:HG2_Ill_GATKHC_18761:HG2_Ill_GATKHCSBGrefine_7878:HG2_Ill_150bpfermikitraw_14709:HG2_PB_assemblyticsfalcon_3383;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14709:HG2_Ill_GATKHCSBGrefine_7878:HG2_Ill_GATKHC_18761:HG2_Ill_Krunchall_15984:HG2_Ill_svaba_14529:HG2_PB_pbsv_11619:HG4_Ill_150bpfermikitraw_14883:HG4_Ill_GATKHCSBGrefine_8095:HG4_Ill_GATKHC_18781:HG4_Ill_Krunchall_16262:HG4_Ill_scalpel_10759:HG4_Ill_svaba_14594;NumExactMatchSVs=12;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.208333;PBcalls=3;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=34276;DistForward=1153;DistMin=1153;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=95;REFWIDENED=10:120941409-120941554;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=492.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:1|0:2:24:27:2:./.:5:0:2:6:0/1:21:15:./.:.:.:.:.:.
chr10	121046814	HG2_Ill_svaba_14532	AAGGAAGGGAGGGAGAGAGGGAGGGAGGAAGGGAGAGAGGAGGAAGGGAAGG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_11334:HG2_PB_HySA_21121:HG4_Ill_GATKHC_18784:HG4_Ill_GATKHCSBGrefine_8097:HG3_Ill_GATKHC_18672:HG3_Ill_GATKHCSBGrefine_7776:HG2_Ill_GATKHC_18764:HG2_Ill_GATKHCSBGrefine_7879:HG4_PB_HySA_16983:HG4_Ill_manta_2788:HG2_Ill_manta_3289:HG2_PB_assemblyticsPBcR_3296:HG2_PB_assemblyticsfalcon_3386:HG4_PB_assemblyticsfalcon_3270:HG2_PB_pbsv_11621:HG4_PB_pbsv_11630:HG4_Ill_svaba_14597:HG4_Ill_scalpel_10761:HG4_Ill_Krunchall_16265:HG4_Ill_GATKHC_18783:HG4_Ill_GATKHCSBGrefine_8096:HG4_Ill_250bpfermikitraw_15503:HG3_Ill_svaba_14705:HG3_Ill_scalpel_11245:HG3_Ill_Krunchall_15666:HG3_Ill_250bpfermikitraw_15194:HG3_Ill_150bpfermikitraw_14744:HG2_Ill_svaba_14532:HG2_Ill_scalpel_11063:HG2_Ill_Krunchall_15987:HG2_Ill_GATKHC_18763:HG3_PB_HySA_17597;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_GATKHC_18763:HG2_Ill_Krunchall_15987:HG2_Ill_scalpel_11063:HG2_Ill_svaba_14532:HG3_Ill_150bpfermikitraw_14744:HG3_Ill_250bpfermikitraw_15194:HG3_Ill_Krunchall_15666:HG3_Ill_scalpel_11245:HG3_Ill_svaba_14705:HG4_Ill_250bpfermikitraw_15503:HG4_Ill_GATKHCSBGrefine_8096:HG4_Ill_GATKHC_18783:HG4_Ill_Krunchall_16265:HG4_Ill_scalpel_10761:HG4_Ill_svaba_14597:HG4_PB_pbsv_11630;NumExactMatchSVs=16;ClusterMaxShiftDist=0.156863;ClusterMaxSizeDiff=0.156863;ClusterMaxEditDist=0.161616;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=7621;DistForward=-43;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=10:121046813-121046897;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=493.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:41:1/1:1:20:4:20:1/1:1:11:1:7:1/1:0:16:./.:.:.:.:.:.
chr10	121227484	HG2_Ill_GATKHC_18768	GTGAAACTTCCCTAGGCGGCCCAGAAACCGACTAGCAGCGGGGCCTTTGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8176:HG4_PB_pbsv_11636:HG2_PB_HySA_21130:HG4_Ill_svaba_14602:HG4_Ill_scalpel_10766:HG4_Ill_Krunchall_16267:HG4_Ill_GATKHC_18789:HG4_Ill_GATKHCSBGrefine_8101:HG4_Ill_250bpfermikitraw_15506:HG4_Ill_150bpfermikitraw_14889:HG3_PB_assemblyticsfalcon_3331:HG2_PB_pbsv_11629:HG2_PB_assemblyticsfalcon_3390:HG2_Ill_svaba_14538:HG2_Ill_scalpel_11066:HG2_Ill_SpiralSDKrefine_2171:HG2_Ill_Krunchall_15990:HG2_Ill_GATKHC_18768:HG2_Ill_GATKHCSBGrefine_7883:HG2_Ill_250bpfermikitraw_15622:HG2_Ill_Spiral_812:HG4_PB_SVrefine2PBcRDovetail_5856:HG4_Ill_SVrefine2DISCOVARDovetail_8389:HG2_PB_SVrefine2PBcRplusDovetail_1419:HG2_PB_SVrefine2PB10Xhap12_8408:HG2_PB_SVrefine2Falcon2Bionano_5613:HG2_Ill_SVrefine2DISCOVARplusDovetail_1719;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15622:HG2_Ill_GATKHCSBGrefine_7883:HG2_Ill_GATKHC_18768:HG2_Ill_Krunchall_15990:HG2_Ill_SpiralSDKrefine_2171:HG2_Ill_scalpel_11066:HG2_Ill_svaba_14538:HG2_PB_assemblyticsfalcon_3390:HG2_PB_pbsv_11629:HG3_PB_assemblyticsfalcon_3331:HG4_Ill_150bpfermikitraw_14889:HG4_Ill_250bpfermikitraw_15506:HG4_Ill_GATKHCSBGrefine_8101:HG4_Ill_GATKHC_18789:HG4_Ill_Krunchall_16267:HG4_Ill_scalpel_10766:HG4_Ill_svaba_14602:HG4_PB_pbsv_11636;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.213592;PBcalls=9;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=-10;DistForward=908;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=105;REFWIDENED=10:121227392-121227546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=494.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:0|1:31:10:5:16:0|1:11:0:0:13:0/1:18:29:./.:.:.:.:.:.
chr10	121481833	HG4_Ill_150bpfermikitraw_14893	CGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCGGGGAGGGAGGTGGGGGGATCAGGCCCCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8179:HG3_PB_assemblyticsfalcon_3336:HG3_PB_SVrefine2Falcon1Dovetail_7031:HG2_PB_pbsv_11631:HG4_PB_pbsv_11638:HG4_Ill_GATKHC_18797:HG4_Ill_GATKHCSBGrefine_8102:HG4_Ill_250bpfermikitraw_15509:HG4_Ill_150bpfermikitraw_14893:HG2_Ill_GATKHC_18776:HG2_Ill_GATKHCSBGrefine_7887:HG4_PB_SVrefine2PBcRDovetail_5858:HG4_PB_SVrefine2Falcon1Dovetail_7076:HG2_PB_SVrefine2PB10Xhap12_8410;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7887:HG2_Ill_GATKHC_18776:HG4_Ill_150bpfermikitraw_14893:HG4_Ill_250bpfermikitraw_15509:HG4_Ill_GATKHCSBGrefine_8102:HG4_Ill_GATKHC_18797;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0304569;ClusterMaxSizeDiff=0.0304569;ClusterMaxEditDist=0.111111;PBcalls=7;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-98;DistBack=-79;DistForward=10061;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=48;REFWIDENED=10:121481832-121481980;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=495.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:17:./.:6:12:13:0:./.:5:0:0:4:0/1:25:17:./.:.:.:.:.:.
chr10	122605344	HG3_Ill_Krunchall_15680	GTCCTTCACCCTTAGCGGCAAGTCCCGCTTTCCTGGGGCAGGGGCAAGTACCCCTCAACCCCTTC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_14726:HG4_PB_HySA_17004:HG3_PB_assemblyticsfalcon_3350:HG4_PB_assemblyticsfalcon_3295:HG2_PB_assemblyticsfalcon_3407:HG3_PB_pbsv_11346:HG2_PB_pbsv_11638:HG4_PB_pbsv_11647:HG2_PB_HySA_21143:HG4_Ill_svaba_14617:HG4_Ill_manta_2790:HG4_Ill_Krunchall_16280:HG4_Ill_GATKHC_18805:HG4_Ill_GATKHCSBGrefine_8105:HG4_Ill_250bpfermikitraw_15517:HG4_Ill_150bpfermikitraw_14899:HG3_Ill_svaba_14725:HG3_Ill_scalpel_11262:HG3_Ill_Krunchall_15680:HG3_Ill_GATKHC_18688:HG3_Ill_GATKHCSBGrefine_7781:HG3_Ill_250bpfermikitraw_15208:HG3_Ill_150bpfermikitraw_14760:HG2_PB_assemblyticsPBcR_3321:HG2_Ill_svaba_14548:HG2_Ill_Krunchall_16002:HG2_Ill_GATKHCSBGrefine_7889:HG2_Ill_250bpfermikitraw_15634;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14726:HG4_Ill_svaba_14617:HG4_Ill_manta_2790:HG4_Ill_Krunchall_16280:HG4_Ill_GATKHC_18805:HG4_Ill_GATKHCSBGrefine_8105:HG4_Ill_250bpfermikitraw_15517:HG4_Ill_150bpfermikitraw_14899:HG3_Ill_svaba_14725:HG3_Ill_scalpel_11262:HG3_Ill_Krunchall_15680:HG3_Ill_GATKHC_18688:HG3_Ill_GATKHCSBGrefine_7781:HG3_Ill_250bpfermikitraw_15208:HG3_Ill_150bpfermikitraw_14760:HG2_PB_assemblyticsPBcR_3321:HG2_Ill_svaba_14548:HG2_Ill_Krunchall_16002:HG2_Ill_GATKHCSBGrefine_7889:HG2_Ill_250bpfermikitraw_15634;NumExactMatchSVs=20;ClusterMaxShiftDist=0.110236;ClusterMaxSizeDiff=0.110236;ClusterMaxEditDist=0.141732;PBcalls=9;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-64;DistBack=47082;DistForward=-33;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=38;REFWIDENED=10:122605345-122605446;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=496.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:0|1:20:0:3:29:1|0:0:7:20:0:0/1:28:22:./.:.:.:.:.:.
chr10	123489180	HG2_10X_SVrefine210Xhap12_8183	TGAAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGCGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8416:HG2_PB_assemblyticsPBcR_3330:HG4_PB_assemblyticsfalcon_3303:HG4_PB_HySA_17011:HG2_Ill_Krunchall_16011:HG4_Ill_Spiral_948:HG4_PB_pbsv_11650:HG4_Ill_MetaSV_695:HG2_PB_HySA_21151:HG4_PB_SVrefine2PBcRDovetail_5866:HG4_PB_SVrefine2Falcon1Dovetail_7085:HG4_Ill_manta_2792:HG4_Ill_SVrefine2DISCOVARDovetail_8397:HG4_Ill_GATKHCSBGrefine_8107:HG4_10X_allpass_2232:HG2_PB_pbsv_11640:HG2_PB_SVrefine2PBcRplusDovetail_1427:HG2_PB_SVrefine2PB10Xhap12_8417:HG2_PB_SVrefine2Falcon2Bionano_5620:HG2_Ill_manta_3291:HG2_Ill_SVrefine2DISCOVARplusDovetail_1726:HG2_Ill_GATKHCSBGrefine_7891:HG2_10X_allpass_1902:HG2_10X_SVrefine210Xhap12_8183;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8183:HG2_10X_allpass_1902:HG2_Ill_GATKHCSBGrefine_7891:HG2_Ill_SVrefine2DISCOVARplusDovetail_1726:HG2_Ill_manta_3291:HG2_PB_SVrefine2Falcon2Bionano_5620:HG2_PB_SVrefine2PB10Xhap12_8417:HG2_PB_SVrefine2PBcRplusDovetail_1427:HG2_PB_pbsv_11640:HG4_10X_allpass_2232:HG4_Ill_GATKHCSBGrefine_8107:HG4_Ill_SVrefine2DISCOVARDovetail_8397:HG4_Ill_manta_2792:HG4_PB_SVrefine2Falcon1Dovetail_7085:HG4_PB_SVrefine2PBcRDovetail_5866;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0861373;ClusterMaxSizeDiff=0.0861373;ClusterMaxEditDist=0.125341;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=-314;DistForward=3704;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=10:123489181-123489502;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=497.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:0|1:31:4:2:23:0|1:41:0:0:17:0/1:12:8:0/1:14:5:.:.:.
chr10	125442629	HG3_Ill_GATKHC_18723	ATAAAGGGTGCTAATTTGTCACTTTAAACTCAGGATTTGAAAGTACAGGTGCTTGATCACAC	A	20	PASS	ClusterIDs=HG4_PB_HySA_17032:HG2_PB_HySA_21190:HG2_PB_assemblyticsPBcR_3351:HG3_PB_HySA_17628:HG4_PB_pbsv_11660:HG3_PB_assemblyticsfalcon_3389:HG4_PB_assemblyticsfalcon_3324:HG4_Ill_svaba_14649:HG4_Ill_scalpel_10795:HG4_Ill_manta_2796:HG4_Ill_Krunchall_16305:HG4_Ill_GATKHC_18836:HG4_Ill_GATKHCSBGrefine_8115:HG4_Ill_Cortex_470:HG4_Ill_250bpfermikitraw_15540:HG4_Ill_150bpfermikitraw_14920:HG4_10X_allpass_2235:HG3_Ill_svaba_14761:HG3_Ill_scalpel_11283:HG3_Ill_manta_2690:HG3_Ill_Krunchall_15709:HG3_Ill_GATKHC_18723:HG3_Ill_GATKHCSBGrefine_7789:HG3_Ill_Cortex_487:HG3_Ill_250bpfermikitraw_15237:HG3_Ill_150bpfermikitraw_14790:HG3_CG_vcfBeta_6351:HG3_10X_allpass_2316:HG2_PB_pbsv_11648:HG2_PB_assemblyticsfalcon_3442:HG2_Ill_svaba_14579:HG2_Ill_scalpel_11100:HG2_Ill_manta_3292:HG2_Ill_breakscan11_1677:HG2_Ill_Krunchall_16029:HG2_Ill_GATKHC_18818:HG2_Ill_GATKHCSBGrefine_7893:HG2_Ill_Cortex_1111:HG2_Ill_250bpfermikitraw_15660:HG2_Ill_150bpfermikitraw_14754:HG3_PB_pbsv_11356;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14754:HG2_Ill_250bpfermikitraw_15660:HG2_Ill_Cortex_1111:HG2_Ill_GATKHCSBGrefine_7893:HG2_Ill_GATKHC_18818:HG2_Ill_Krunchall_16029:HG2_Ill_breakscan11_1677:HG2_Ill_manta_3292:HG2_Ill_scalpel_11100:HG2_Ill_svaba_14579:HG2_PB_assemblyticsfalcon_3442:HG2_PB_pbsv_11648:HG3_10X_allpass_2316:HG3_CG_vcfBeta_6351:HG3_Ill_150bpfermikitraw_14790:HG3_Ill_250bpfermikitraw_15237:HG3_Ill_Cortex_487:HG3_Ill_GATKHCSBGrefine_7789:HG3_Ill_GATKHC_18723:HG3_Ill_Krunchall_15709:HG3_Ill_manta_2690:HG3_Ill_scalpel_11283:HG3_Ill_svaba_14761:HG4_10X_allpass_2235:HG4_Ill_150bpfermikitraw_14920:HG4_Ill_250bpfermikitraw_15540:HG4_Ill_Cortex_470:HG4_Ill_GATKHCSBGrefine_8115:HG4_Ill_GATKHC_18836:HG4_Ill_Krunchall_16305:HG4_Ill_manta_2796:HG4_Ill_scalpel_10795:HG4_Ill_svaba_14649;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0983607;ClusterMaxEditDist=0.147541;PBcalls=10;Illcalls=28;TenXcalls=2;CGcalls=1;PBexactcalls=2;Illexactcalls=28;TenXexactcalls=2;CGexactcalls=1;HG2count=14;HG3count=14;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-61;DistBack=7279;DistForward=13618;DistMin=7279;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=10:125442628-125442692;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=499.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:45:./.:25:11:14:33:1|0:0:10:33:0:0/1:31:21:./.:.:.:.:.:.
chr10	128106472	HG3_Ill_SVrefine2DISCOVARDovetail_8620	TAAAAATGATTACTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_17065:HG2_PB_HySA_21237:HG3_Ill_Krunchall_15743:HG2_Ill_Krunchall_16061:HG2_PB_assemblyticsfalcon_3472:HG4_PB_assemblyticsfalcon_3354:HG3_PB_assemblyticsfalcon_3418:HG2_PB_assemblyticsPBcR_3380:HG2_PB_pbsv_11662:HG4_Ill_MetaSV_701:HG3_PB_HySA_17657:HG3_Ill_MetaSV_663:HG2_Ill_tnscope_1320:HG2_Ill_MetaSV_681:HG4_PB_SVrefine2PBcRDovetail_5881:HG4_PB_SVrefine2Falcon1Dovetail_7090:HG4_Ill_svaba_14676:HG4_Ill_scalpel_10811:HG4_Ill_manta_2799:HG4_Ill_SVrefine2DISCOVARDovetail_8416:HG4_Ill_GATKHCSBGrefine_8122:HG4_10X_allpass_2236:HG3_PB_pbsv_11372:HG3_PB_SVrefine2PBcRDovetail_5468:HG3_PB_SVrefine2Falcon1Dovetail_7055:HG3_Ill_svaba_14786:HG3_Ill_scalpel_11304:HG3_Ill_manta_2694:HG3_Ill_SVrefine2DISCOVARDovetail_8620:HG3_Ill_GATKHCSBGrefine_7798:HG3_10X_allpass_2318:HG2_PB_SVrefine2PBcRplusDovetail_1442:HG2_PB_SVrefine2PB10Xhap12_8434:HG2_PB_SVrefine2Falcon2Bionano_5636:HG2_PB_SVrefine2Falcon1plusDovetail_1503:HG2_Ill_svaba_14607:HG2_Ill_scalpel_11125:HG2_Ill_manta_3295:HG2_Ill_SVrefine2DISCOVARplusDovetail_1745:HG2_Ill_GATKHCSBGrefine_7900:HG2_10X_SVrefine210Xhap12_8201:HG4_PB_pbsv_11675:HG2_Ill_breakscan11_1682:HG3_Ill_Spiral_12281:HG2_Ill_Spiral_813;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8201:HG2_Ill_GATKHCSBGrefine_7900:HG2_Ill_SVrefine2DISCOVARplusDovetail_1745:HG2_Ill_manta_3295:HG2_Ill_scalpel_11125:HG2_Ill_svaba_14607:HG2_PB_SVrefine2Falcon1plusDovetail_1503:HG2_PB_SVrefine2Falcon2Bionano_5636:HG2_PB_SVrefine2PB10Xhap12_8434:HG2_PB_SVrefine2PBcRplusDovetail_1442:HG3_10X_allpass_2318:HG3_Ill_GATKHCSBGrefine_7798:HG3_Ill_SVrefine2DISCOVARDovetail_8620:HG3_Ill_manta_2694:HG3_Ill_scalpel_11304:HG3_Ill_svaba_14786:HG3_PB_SVrefine2Falcon1Dovetail_7055:HG3_PB_SVrefine2PBcRDovetail_5468:HG3_PB_pbsv_11372:HG4_10X_allpass_2236:HG4_Ill_GATKHCSBGrefine_8122:HG4_Ill_SVrefine2DISCOVARDovetail_8416:HG4_Ill_manta_2799:HG4_Ill_scalpel_10811:HG4_Ill_svaba_14676:HG4_PB_SVrefine2Falcon1Dovetail_7090:HG4_PB_SVrefine2PBcRDovetail_5881;NumExactMatchSVs=27;ClusterMaxShiftDist=0.114286;ClusterMaxSizeDiff=0.114286;ClusterMaxEditDist=0.114286;PBcalls=18;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=35722;DistForward=1048;DistMin=1048;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=10:128106473-128106799;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=500.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:2:25:0:28:1/1:0:25:0:18:1/1:0:44:0/1:2:18:.:.:.
chr10	129021039	HG2_Ill_GATKHC_18861	CTCACTTTAGCCTCCCAAGTAGCTGGGACTACAAGCACTTGCCACTACGCCTGGCTAATTTTTTTCTTTCTTAAAAATTTT	C	20	PASS	ClusterIDs=HG2_10X_allpass_1906:HG3_PB_HySA_17671:HG3_PB_pbsv_11380:HG3_Ill_svaba_14796:HG3_Ill_scalpel_11311:HG3_Ill_manta_2697:HG3_Ill_Krunchall_15755:HG3_Ill_GATKHC_18773:HG3_Ill_GATKHCSBGrefine_7800:HG3_Ill_250bpfermikitraw_15276:HG3_Ill_150bpfermikitraw_14827:HG3_10X_allpass_2319:HG2_PB_pbsv_11670:HG2_Ill_svaba_14615:HG2_Ill_scalpel_11130:HG2_Ill_manta_3296:HG2_Ill_breakscan11_1683:HG2_Ill_SpiralSDKrefine_2231:HG2_Ill_Krunchall_16067:HG2_Ill_GATKHC_18861:HG2_Ill_GATKHCSBGrefine_7909:HG2_Ill_250bpfermikitraw_15700:HG2_Ill_150bpfermikitraw_14793:HG2_CG_vcfBeta_6710;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_1906:HG3_PB_pbsv_11380:HG3_Ill_svaba_14796:HG3_Ill_scalpel_11311:HG3_Ill_manta_2697:HG3_Ill_Krunchall_15755:HG3_Ill_GATKHC_18773:HG3_Ill_GATKHCSBGrefine_7800:HG3_Ill_250bpfermikitraw_15276:HG3_Ill_150bpfermikitraw_14827:HG3_10X_allpass_2319:HG2_PB_pbsv_11670:HG2_Ill_svaba_14615:HG2_Ill_scalpel_11130:HG2_Ill_manta_3296:HG2_Ill_breakscan11_1683:HG2_Ill_SpiralSDKrefine_2231:HG2_Ill_Krunchall_16067:HG2_Ill_GATKHC_18861:HG2_Ill_GATKHCSBGrefine_7909:HG2_Ill_250bpfermikitraw_15700:HG2_Ill_150bpfermikitraw_14793:HG2_CG_vcfBeta_6710;NumExactMatchSVs=23;ClusterMaxShiftDist=0.131579;ClusterMaxSizeDiff=0.131579;ClusterMaxEditDist=0.131579;PBcalls=3;Illcalls=18;TenXcalls=2;CGcalls=1;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=1;HG2count=13;HG3count=11;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-80;DistBack=16638;DistForward=-56;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=10:129021038-129021121;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=501.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:27:0|1:36:8:3:16:1|0:0:19:38:0:0/1:24:22:./.:.:.:.:.:.
chr10	129565302	HG4_Ill_MetaSV_707	TTAGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1321:HG2_PB_assemblyticsPBcR_3400:HG2_PB_PB10Xdip_3081:HG2_PB_SVrefine2PB10Xhap12_8445:HG2_PB_PB10Xdip_3082:HG4_PB_assemblyticsfalcon_3371:HG3_PB_assemblyticsfalcon_3438:HG2_PB_SVrefine2PBcRplusDovetail_1449:HG4_Ill_Krunchall_16348:HG3_Ill_Krunchall_15764:HG2_PB_SVrefine2PB10Xhap12_8444:HG2_Ill_Krunchall_16081:HG4_PB_SVrefine2Falcon1Dovetail_7100:HG3_PB_SVrefine2Falcon1Dovetail_7066:HG3_Ill_Spiral_12302:HG2_PB_HySA_21263:HG2_Ill_Spiral_815:HG4_PB_pbsv_11689:HG4_PB_SVrefine2PBcRDovetail_5888:HG4_Ill_scalpel_10823:HG4_Ill_manta_2802:HG4_Ill_MetaSV_707:HG4_Ill_GATKHCSBGrefine_8127:HG3_PB_pbsv_11390:HG3_PB_SVrefine2PBcRDovetail_5478:HG3_Ill_scalpel_11319:HG3_Ill_manta_2699:HG3_Ill_SVrefine2DISCOVARDovetail_8631:HG3_Ill_GATKHCSBGrefine_7804:HG3_10X_allpass_2320:HG2_PB_pbsv_11681:HG2_PB_SVrefine2Falcon1plusDovetail_1511:HG2_Ill_scalpel_11140:HG2_Ill_manta_3298:HG2_Ill_breakscan11_1685:HG2_Ill_SVrefine2DISCOVARplusDovetail_1756:HG2_Ill_MetaSV_684:HG2_Ill_GATKHCSBGrefine_7913:HG2_10X_allpass_1907:HG2_10X_SVrefine210Xhap12_8210:HG4_PB_HySA_17085:HG3_Ill_MetaSV_671;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8210:HG2_10X_allpass_1907:HG2_Ill_GATKHCSBGrefine_7913:HG2_Ill_MetaSV_684:HG2_Ill_SVrefine2DISCOVARplusDovetail_1756:HG2_Ill_breakscan11_1685:HG2_Ill_manta_3298:HG2_Ill_scalpel_11140:HG2_PB_SVrefine2Falcon1plusDovetail_1511:HG2_PB_pbsv_11681:HG3_10X_allpass_2320:HG3_Ill_GATKHCSBGrefine_7804:HG3_Ill_SVrefine2DISCOVARDovetail_8631:HG3_Ill_manta_2699:HG3_Ill_scalpel_11319:HG3_PB_SVrefine2PBcRDovetail_5478:HG3_PB_pbsv_11390:HG4_Ill_GATKHCSBGrefine_8127:HG4_Ill_MetaSV_707:HG4_Ill_manta_2802:HG4_Ill_scalpel_10823:HG4_PB_SVrefine2PBcRDovetail_5888:HG4_PB_pbsv_11689;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0636516;ClusterMaxSizeDiff=0.0636516;ClusterMaxEditDist=0.0636516;PBcalls=18;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=14353;DistForward=29985;DistMin=14353;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=10:129565303-129565619;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=503.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:26:0|1:15:4:2:21:1|0:0:21:18:0:0/1:29:25:0/1:25:6:.:.:.
chr10	130774798	HG2_Ill_SVrefine2DISCOVARplusDovetail_1761	GAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAGA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_11692:HG4_PB_pbsv_11694:HG4_PB_HySA_17093:HG4_10X_allpass_2237:HG4_Ill_SVrefine2DISCOVARDovetail_8425:HG4_Ill_GATKHCSBGrefine_8138:HG2_Ill_manta_3299:HG2_Ill_SVrefine2DISCOVARplusDovetail_1761:HG2_PB_SVrefine2Falcon1plusDovetail_1518:HG2_PB_HySA_21284;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1761:HG2_Ill_manta_3299:HG4_Ill_GATKHCSBGrefine_8138:HG4_Ill_SVrefine2DISCOVARDovetail_8425:HG4_PB_HySA_17093;NumExactMatchSVs=5;ClusterMaxShiftDist=0.228571;ClusterMaxSizeDiff=0.228571;ClusterMaxEditDist=0.228571;PBcalls=5;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-127;DistBack=-80;DistForward=-58;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=99;REFWIDENED=10:130774783-130775008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=504.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:31:0|1:38:1:1:27:./.:17:1:0:3:0/1:25:15:./.:.:.:.:.:.
chr10	130836870	HG2_PB_assemblyticsPBcR_3414	ATAAAATCTCTGAGTCTGAGAAAAAGTCAGGAAAGGTCAGATGTCAACCAGGTTAACATTAAAATTGTTAGAAAACAGGAACCGTAATTTGGGGATTGAAAAAGAGGCAGAATTCATGTTGTAAGTGCAAGTGATCTGGAAATAGATGTTTATCTTGGCCATTTTCAGGGAAGTGACATCATATCGTGTGTCTACTGGGATATTACTCCTGCATTTTTCAATCCAGATTTTGGCACTAAAGTTGGCAAAATTAGACCATTTTGTTAAACTGATCTTGGAGGCGTCCACCTCCCGAGCACATTACAACACACCTATGACATGACTCTAGAACAATGGGTGAAAAATGGGCCATAAAACAGGAATGGCCTGCTTCATGTAAAGTGGATTTTATAGTGCAGGTGTACC	at	20	PASS	ClusterIDs=HG4_PB_pbsv_11695:HG4_PB_assemblyticsfalcon_3384:HG4_PB_SVrefine2Falcon1Dovetail_7107:HG4_Ill_manta_2805:HG4_Ill_SVrefine2DISCOVARDovetail_8426:HG4_Ill_GATKHCSBGrefine_8139:HG4_Ill_Cortex_480:HG4_10X_allpass_2238:HG3_PB_pbsv_11398:HG3_PB_assemblyticsfalcon_3451:HG3_PB_SVrefine2PBcRDovetail_5483:HG3_PB_SVrefine2Falcon1Dovetail_7071:HG3_Ill_manta_2700:HG3_Ill_SVrefine2DISCOVARDovetail_8637:HG3_Ill_GATKHCSBGrefine_7808:HG3_Ill_Cortex_497:HG3_10X_allpass_2321:HG2_PB_pbsv_11693:HG2_PB_assemblyticsfalcon_3511:HG2_PB_SVrefine2PBcRplusDovetail_1454:HG2_PB_SVrefine2Falcon2Bionano_5649:HG2_PB_SVrefine2Falcon1plusDovetail_1519:HG2_Ill_manta_3300:HG2_Ill_breakscan11_1686:HG2_Ill_SpiralSDKrefine_2243:HG2_Ill_SVrefine2DISCOVARplusDovetail_1762:HG2_Ill_GATKHCSBGrefine_7920:HG2_Ill_Cortex_1137:HG2_10X_allpass_1908:HG2_PB_assemblyticsPBcR_3414:HG4_Ill_MetaSV_708:HG3_Ill_MetaSV_672:HG2_PB_HySA_21285:HG2_Ill_tnscope_1322:HG2_Ill_MetaSV_685:HG4_Ill_Krunchall_16357:HG3_Ill_Krunchall_15783:HG2_Ill_Krunchall_16098;NumClusterSVs=38;ExactMatchIDs=HG2_PB_assemblyticsPBcR_3414:HG2_10X_allpass_1908:HG2_Ill_Cortex_1137:HG2_Ill_GATKHCSBGrefine_7920:HG2_Ill_SVrefine2DISCOVARplusDovetail_1762:HG2_Ill_SpiralSDKrefine_2243:HG2_Ill_breakscan11_1686:HG2_Ill_manta_3300:HG2_PB_SVrefine2Falcon1plusDovetail_1519:HG2_PB_SVrefine2Falcon2Bionano_5649:HG2_PB_SVrefine2PBcRplusDovetail_1454:HG2_PB_assemblyticsfalcon_3511:HG2_PB_pbsv_11693:HG3_10X_allpass_2321:HG3_Ill_Cortex_497:HG3_Ill_GATKHCSBGrefine_7808:HG3_Ill_SVrefine2DISCOVARDovetail_8637:HG3_Ill_manta_2700:HG3_PB_SVrefine2Falcon1Dovetail_7071:HG3_PB_SVrefine2PBcRDovetail_5483:HG3_PB_assemblyticsfalcon_3451:HG3_PB_pbsv_11398:HG4_10X_allpass_2238:HG4_Ill_Cortex_480:HG4_Ill_GATKHCSBGrefine_8139:HG4_Ill_SVrefine2DISCOVARDovetail_8426:HG4_Ill_manta_2805:HG4_PB_SVrefine2Falcon1Dovetail_7107:HG4_PB_assemblyticsfalcon_3384;NumExactMatchSVs=29;ClusterMaxShiftDist=0.00495049;ClusterMaxSizeDiff=0.00495049;ClusterMaxEditDist=0.00495663;PBcalls=14;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=12;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-403;DistBack=-209;DistForward=-404;DistMin=-404;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=10:130836872-130837274;PctSeqSimilarity=0.9988;PctSizeSimilarity=1;PctRecOverlap=0.9975;SizeDiff=0;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=505.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:32:0|1:21:0:1:36:1|0:0:32:62:0:0/1:57:22:0/1:31:8:.:.:.
chr10	131595177	HG2_10X_allpass_1909	TGCATTCGACAGCCTGAGCTTTGAAAGCCCGCAGGGTGGGATGTCGGAAGGGCAGGCACATCTGGCCCAGAAGATAGTGGTGATCCCTCGGGCCGTCTTCAGCTCGCCAGGGTCCTTAGTTGGTTCAACTGTCCGTCACGGTGTCCTGCTGCTCCTGCTCACCTCTCCCATGCAGCTGGCTGCATTGTACCTCACCTCCAGCACCACTCTGCCTCCACACCTGCCCTCCCAGTCCTGCCAGGGCAGGGCCTCCTCCCTTTTGTCTTCCTGCTGGGCTCCAGGCTCCTGAGAAGCAAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_11702:HG2_PB_PB10Xdip_3104:HG2_PB_SVrefine2PB10Xhap12_8456:HG2_PB_HySA_21296:HG4_PB_assemblyticsfalcon_3390:HG3_Ill_Krunchall_15790:HG2_PB_assemblyticsPBcR_3423:HG2_PB_SVrefine2PBcRplusDovetail_1458:HG2_Ill_Krunchall_16104:HG2_PB_assemblyticsfalcon_3523:HG4_Ill_MetaSV_709:HG3_Ill_MetaSV_674:HG2_Ill_tnscope_1323:HG2_Ill_MetaSV_686:HG4_PB_SVrefine2Falcon1Dovetail_7110:HG4_Ill_scalpel_10840:HG4_Ill_manta_2807:HG4_Ill_GATKHCSBGrefine_8141:HG4_10X_allpass_2239:HG3_PB_pbsv_11407:HG3_PB_assemblyticsfalcon_3462:HG3_PB_SVrefine2Falcon1Dovetail_7077:HG3_Ill_scalpel_11336:HG3_Ill_manta_2701:HG3_Ill_GATKHCSBGrefine_7811:HG3_10X_allpass_2322:HG2_PB_SVrefine2PB10Xhap12_8455:HG2_PB_SVrefine2Falcon2Bionano_5654:HG2_PB_SVrefine2Falcon1plusDovetail_1524:HG2_Ill_scalpel_11154:HG2_Ill_manta_3302:HG2_Ill_breakscan11_1687:HG2_Ill_SpiralSDKrefine_2247:HG2_Ill_SVrefine2DISCOVARplusDovetail_1767:HG2_Ill_GATKHCSBGrefine_7923:HG2_10X_allpass_1909:HG2_10X_SVrefine210Xhap12_8224:HG2_PB_pbsv_11702;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8224:HG2_10X_allpass_1909:HG2_Ill_GATKHCSBGrefine_7923:HG2_Ill_SVrefine2DISCOVARplusDovetail_1767:HG2_Ill_SpiralSDKrefine_2247:HG2_Ill_breakscan11_1687:HG2_Ill_manta_3302:HG2_Ill_scalpel_11154:HG2_PB_SVrefine2Falcon1plusDovetail_1524:HG2_PB_SVrefine2Falcon2Bionano_5654:HG2_PB_SVrefine2PB10Xhap12_8455:HG3_10X_allpass_2322:HG3_Ill_GATKHCSBGrefine_7811:HG3_Ill_manta_2701:HG3_Ill_scalpel_11336:HG3_PB_SVrefine2Falcon1Dovetail_7077:HG3_PB_assemblyticsfalcon_3462:HG3_PB_pbsv_11407:HG4_10X_allpass_2239:HG4_Ill_GATKHCSBGrefine_8141:HG4_Ill_manta_2807:HG4_Ill_scalpel_10840:HG4_PB_SVrefine2Falcon1Dovetail_7110;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0439932;ClusterMaxSizeDiff=0.0439932;ClusterMaxEditDist=0.0439932;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-296;DistBack=16724;DistForward=34068;DistMin=16724;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=10:131595178-131595476;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=506.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:35:0|1:30:9:6:23:1|0:0:12:55:0:0/1:33:17:./.:.:.:.:.:.
chr10	132317178	HG2_PB_SVrefine2PB10Xhap12_8464	CAGTAAGGAGCAGGCAAGATGGCGCTGGTCAAAGTAAGGAGCAGGCAAGATGGCGCTGGTCAAAGTAAGGAGCAGGCAAGATGGCGCTGGTCAA	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1531:HG4_PB_HySA_17117:HG3_PB_pbsv_11420:HG4_PB_pbsv_11713:HG2_PB_pbsv_11712:HG4_PB_SVrefine2Falcon1Dovetail_7118:HG2_PB_SVrefine2PBcRplusDovetail_1465:HG2_PB_SVrefine2PB10Xhap12_8464:HG2_PB_SVrefine2Falcon2Bionano_5661;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1531:HG4_PB_SVrefine2Falcon1Dovetail_7118:HG2_PB_SVrefine2PBcRplusDovetail_1465:HG2_PB_SVrefine2PB10Xhap12_8464:HG2_PB_SVrefine2Falcon2Bionano_5661;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0212766;ClusterMaxSizeDiff=0.0212766;ClusterMaxEditDist=0.0215054;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-93;DistBack=-63;DistForward=-94;DistMin=-94;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=341;REFWIDENED=10:132317179-132317612;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=507.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:63:1/1:0:11:1:10:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr10	132557258	HG3_PB_SVrefine2Falcon1Dovetail_7095	TTTCAGGATGCACAGAGGTTAGGGGTTGGGGATTCAGGATGCACAGTTGTTAGGGATTTAGGATTCAGGATGCAGAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTCGGGATGCACAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTCGGGATGCACAGTTGATAGGGGATGGGAACTCGGGATGCACAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTTGGGATGCACAGTTGATAGGGGATGGGAATTTGGGATGCACAGTTGATAGGGATTGGGGATTTCAGATGCACAGTTGTTAGGGATTGGGGATTTGGGATGCACAGATGTTAGGGGTTTGGGATTCAGGATGCACAGTTGATAGGGGATGGGAATTTGGGATACACAGTTGATAGGGGATGGGATTTCAGGATGCACAGATGTTAGGGGTTCAGGATTCAGGATGCACAGTTGTTAGGGATTTAGGATTCAGGATGCAGAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTCGGGATGCACAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTCGGGATGCACAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTCGGGATGCACAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTCGGGATGCACAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTTGGGATGCACAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTCGGGATGCACAGTTGATAGGGGATGGGAACTCGGGATGCACAGTTGATAGGGGATGAGAATTCGGGATGCACAGTTGATAGGGGATGGGAACTTGGGATGCACAGTTGATAGGGGATGGGAATTTGGGATGCACAGTTGATAGGGATTGGGGATTTCAGATGCACAGTTGTTAGGGATTGGGGATTTGGGATGCACAGATGTTAGGGGTTTGGGATTCAGGATGCACAGTTGATAGGGGATGGGAATTTGGGATACACAGTTGATAGGGGATGGGATTTCAGGATGCACAGATGTTAGGGGTTCAGGATTCAGGATGCACAGTTGTTAGGGATTTAGGA	T	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_8653:HG3_PB_pbsv_11425:HG3_PB_HySA_17734:HG2_PB_pbsv_11716:HG3_PB_SVrefine2PBcRDovetail_5492:HG3_PB_SVrefine2Falcon1Dovetail_7095:HG2_PB_SVrefine2PB10Xhap12_8472:HG2_PB_SVrefine2Falcon1plusDovetail_1535:HG2_PB_SVrefine2PBcRplusDovetail_1469:HG2_PB_SVrefine2PB10Xhap12_8471:HG3_PB_SVrefine2Falcon1Dovetail_7094:HG4_PB_SVrefine2PBcRDovetail_5904:HG3_PB_SVrefine2Falcon1Dovetail_7093:HG2_PB_SVrefine2Falcon2Bionano_5663:HG2_PB_SVrefine2Falcon1plusDovetail_1534:HG4_PB_SVrefine2Falcon1Dovetail_7122:HG4_Ill_SVrefine2DISCOVARDovetail_8433;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1535:HG2_PB_SVrefine2PB10Xhap12_8472:HG3_PB_SVrefine2Falcon1Dovetail_7095:HG3_PB_SVrefine2PBcRDovetail_5492;NumExactMatchSVs=4;ClusterMaxShiftDist=0.356479;ClusterMaxSizeDiff=0.356479;ClusterMaxEditDist=0.356479;PBcalls=15;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-1240;DistBack=5751;DistForward=-1160;DistMin=-1160;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=729;REFWIDENED=10:132557195-132559163;PctSeqSimilarity=0.8867;PctSizeSimilarity=1;PctRecOverlap=0.9404;SizeDiff=0;StartDistance=-74;EndDistance=-74;GTMatch=0;TruScore=94;MatchId=508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:60:./.:4:30:15:20:./.:14:1:14:0:0/0:32:0:0/1:18:41:1026:.:.
chr10	132728749	HG2_PB_SVrefine2Falcon2Bionano_5667	ACCTGCTCCTCCTGTGGCTCCATCATGAGCACCTTCTTCTCCTCCTGTGGCTCCGTCATGAGCACCTCCTCCTCCTTCTCCTGTGGCTCCATCATGAGCACCTCCT	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1778:HG4_PB_assemblyticsfalcon_3424:HG4_PB_SVrefine2Falcon1Dovetail_7128:HG2_PB_HySA_21335:HG4_PB_pbsv_11727:HG2_PB_pbsv_11731:HG3_PB_pbsv_11436:HG4_PB_HySA_17128:HG4_PB_SVrefine2PBcRDovetail_5906:HG3_PB_SVrefine2PBcRDovetail_5494:HG3_PB_SVrefine2Falcon1Dovetail_7100:HG2_PB_SVrefine2PBcRplusDovetail_1474:HG2_PB_SVrefine2PB10Xhap12_8478:HG2_PB_SVrefine2Falcon2Bionano_5667:HG2_PB_SVrefine2Falcon1plusDovetail_1542;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1778:HG4_PB_SVrefine2PBcRDovetail_5906:HG3_PB_SVrefine2PBcRDovetail_5494:HG3_PB_SVrefine2Falcon1Dovetail_7100:HG2_PB_SVrefine2PBcRplusDovetail_1474:HG2_PB_SVrefine2PB10Xhap12_8478:HG2_PB_SVrefine2Falcon2Bionano_5667:HG2_PB_SVrefine2Falcon1plusDovetail_1542;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.190045;PBcalls=14;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-105;DistBack=11168;DistForward=-69;DistMin=-69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=375;REFWIDENED=10:132728750-132729229;PctSeqSimilarity=0.9773;PctSizeSimilarity=1;PctRecOverlap=0.6509;SizeDiff=0;StartDistance=-37;EndDistance=-37;GTMatch=0;TruScore=87;MatchId=509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:58:1/1:4:17:3:27:./.:1:3:2:5:1/1:1:11:./.:.:.:.:.:.
chr10	132757356	HG2_Ill_svaba_14681	CCATCTGAATTCTGTCCATGGGAGCCAACAGGTGGATGTGCGTTCAGTGTGGTCACCAGCAGGGGAGGTGCCCATGAGCCCGGCTG	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_15764:HG2_PB_pbsv_11732:HG4_PB_pbsv_11728:HG4_Ill_svaba_14740:HG4_Ill_scalpel_10856:HG4_Ill_Krunchall_16378:HG4_Ill_GATKHC_18940:HG4_Ill_GATKHCSBGrefine_8154:HG4_Ill_250bpfermikitraw_15618:HG4_10X_allpass_2241:HG2_Ill_svaba_14681:HG2_Ill_manta_3305:HG2_Ill_SpiralSDKrefine_2266:HG2_Ill_Krunchall_16123:HG2_Ill_GATKHC_18928:HG2_Ill_GATKHCSBGrefine_7938;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15764:HG4_Ill_svaba_14740:HG4_Ill_scalpel_10856:HG4_Ill_Krunchall_16378:HG4_Ill_GATKHC_18940:HG4_Ill_GATKHCSBGrefine_8154:HG4_Ill_250bpfermikitraw_15618:HG4_10X_allpass_2241:HG2_Ill_svaba_14681:HG2_Ill_manta_3305:HG2_Ill_SpiralSDKrefine_2266:HG2_Ill_Krunchall_16123:HG2_Ill_GATKHC_18928:HG2_Ill_GATKHCSBGrefine_7938;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0117647;ClusterMaxSizeDiff=0.0116959;ClusterMaxEditDist=0.0235294;PBcalls=2;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-85;DistBack=28264;DistForward=10390;DistMin=10390;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=84;REFWIDENED=10:132757314-132757482;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=510.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:19:0|1:37:0:2:16:./.:18:1:0:14:0/1:29:14:./.:.:.:.:.:.
chr10	132858471	HG2_Ill_SVrefine2DISCOVARplusDovetail_1781	TCCTCACGCGCATTTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTTTTTTTCTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1691:HG3_PB_assemblyticsfalcon_3500:HG2_PB_assemblyticsfalcon_3563:HG4_Ill_Krunchall_16380:HG2_PB_assemblyticsPBcR_3456:HG4_PB_assemblyticsfalcon_3429:HG4_Ill_Spiral_952:HG3_Ill_Spiral_12335:HG2_Ill_Spiral_817:HG2_PB_SVrefine2PB10Xhap12_8481:HG4_PB_pbsv_11731:HG3_PB_pbsv_11440:HG4_Ill_MetaSV_717:HG2_Ill_tnscope_1325:HG2_Ill_MetaSV_692:HG4_PB_SVrefine2PBcRDovetail_5907:HG4_PB_SVrefine2Falcon1Dovetail_7131:HG4_Ill_SVrefine2DISCOVARDovetail_8437:HG4_Ill_GATKHCSBGrefine_8161:HG3_PB_SVrefine2Falcon1Dovetail_7102:HG3_Ill_SVrefine2DISCOVARDovetail_8656:HG3_Ill_GATKHCSBGrefine_7831:HG3_10X_allpass_2325:HG2_PB_SVrefine2PBcRplusDovetail_1476:HG2_PB_SVrefine2PB10Xhap12_8480:HG2_PB_SVrefine2Falcon2Bionano_5669:HG2_PB_SVrefine2Falcon1plusDovetail_1544:HG2_Ill_manta_3307:HG2_Ill_SVrefine2DISCOVARplusDovetail_1781:HG2_Ill_GATKHCSBGrefine_7947:HG2_10X_SVrefine210Xhap12_8245:HG2_PB_pbsv_11737;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8245:HG2_Ill_GATKHCSBGrefine_7947:HG2_Ill_SVrefine2DISCOVARplusDovetail_1781:HG2_Ill_manta_3307:HG2_PB_SVrefine2Falcon1plusDovetail_1544:HG2_PB_SVrefine2Falcon2Bionano_5669:HG2_PB_SVrefine2PB10Xhap12_8480:HG2_PB_SVrefine2PBcRplusDovetail_1476:HG3_10X_allpass_2325:HG3_Ill_GATKHCSBGrefine_7831:HG3_Ill_SVrefine2DISCOVARDovetail_8656:HG3_PB_SVrefine2Falcon1Dovetail_7102:HG4_Ill_GATKHCSBGrefine_8161:HG4_Ill_SVrefine2DISCOVARDovetail_8437:HG4_PB_SVrefine2Falcon1Dovetail_7131:HG4_PB_SVrefine2PBcRDovetail_5907;NumExactMatchSVs=16;ClusterMaxShiftDist=0.102489;ClusterMaxSizeDiff=0.102489;ClusterMaxEditDist=0.102489;PBcalls=15;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-349;DistBack=-524;DistForward=14837;DistMin=-524;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=10:132858472-132858838;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=511.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:21:./.:22:9:2:16:./.:0:0:0:0:0/1:25:19:0/1:14:4:.:.:.
chr10	133528791	HG3_Ill_SVrefine2DISCOVARDovetail_8667	AAGTGGGTTTATTACCTGGATTGTAGGGATGGGGACGGCTTCACAGGTGAGTGCGTTTATTACCTGATTGTAGGGAGGGGTACGGCTTCACAGGTGAGTGTGTTTACTACCTGGATTGTGGGGAATGGGTACGGCTTCACAGGTGAGTGCGTTTATTACCTGGATTGTAGGGAGGGGGACGGCTTCACAGGTGAGTGCATTTATTACCTGGATTGTAGGGGTGGGGGACGGCTTCACAGGTGAGTGCGTTTATTACCTGGATTGTAGGGGTGGGGGACGGCTTCACAGGTGAGTGCGTTTATTACCTGGATTGTAGGGGTGGAGGACGGCTTCACAGGTGAGTGCGTTTATTACCTGGATTGTAGGGGTGGGGGACGGCTTCACAGGTGAGTGCGTTTATTACCTGGATTGTAGGGAGGGGGACGGCTTCACAGGTGAGTGCATTTATTACCTGGATTGTAGGGGTGGGGGACGGCTTCACAGGTGAGTGCGTTTATTACCTGGATTGTAGGGGTGGGGGATGGCTTCACAGGTG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1556:HG3_PB_pbsv_11462:HG2_10X_allpass_1913:HG2_Ill_MetaSV_698:HG3_Ill_MetaSV_686:HG3_PB_pbsv_11461:HG4_PB_SVrefine2Falcon1Dovetail_7142:HG3_PB_SVrefine2PBcRDovetail_5503:HG3_PB_SVrefine2Falcon1Dovetail_7115:HG3_Ill_SVrefine2DISCOVARDovetail_8667:HG2_PB_SVrefine2PB10Xhap12_8492:HG2_PB_SVrefine2Falcon2Bionano_5683;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1556:HG4_PB_SVrefine2Falcon1Dovetail_7142:HG3_PB_SVrefine2PBcRDovetail_5503:HG3_PB_SVrefine2Falcon1Dovetail_7115:HG3_Ill_SVrefine2DISCOVARDovetail_8667:HG2_PB_SVrefine2PB10Xhap12_8492:HG2_PB_SVrefine2Falcon2Bionano_5683;NumExactMatchSVs=7;ClusterMaxShiftDist=0.377559;ClusterMaxSizeDiff=0.377559;ClusterMaxEditDist=0.377559;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-534;DistBack=-340;DistForward=-314;DistMin=-340;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=440;REFWIDENED=10:133528792-133529765;PctSeqSimilarity=0.9589;PctSizeSimilarity=0.9926;PctRecOverlap=0.5696;SizeDiff=-4;StartDistance=-228;EndDistance=-232;GTMatch=0;TruScore=84;MatchId=512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:28:0|1:45:0:1:33:./.:10:1:21:0:0/0:30:0:./.:36:3:.:.:.
chr10	133572775	HG3_Ill_manta_2710	GGGATCTTCATACATGCTCTCTATCATGCATCTCTACCCTTGAGTATGACACATGCTGCA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_11463:HG4_PB_HySA_17155:HG4_PB_HySA_17154:HG2_PB_pbsv_11760:HG4_PB_pbsv_11750:HG4_Ill_svaba_14761:HG4_Ill_scalpel_10865:HG4_Ill_manta_2813:HG4_Ill_Krunchall_16399:HG4_Ill_GATKHC_18966:HG4_Ill_GATKHCSBGrefine_8174:HG4_Ill_250bpfermikitraw_15643:HG4_Ill_150bpfermikitraw_15022:HG3_Ill_svaba_14882:HG3_Ill_manta_2710:HG3_Ill_Krunchall_15830:HG3_Ill_GATKHC_18867:HG3_Ill_GATKHCSBGrefine_7853:HG3_Ill_250bpfermikitraw_15350:HG3_Ill_150bpfermikitraw_14895:HG2_PB_assemblyticsPBcR_3485:HG2_Ill_svaba_14705:HG2_Ill_scalpel_11181:HG2_Ill_manta_3314:HG2_Ill_SpiralSDKrefine_2282:HG2_Ill_Krunchall_16144:HG2_Ill_GATKHC_18963:HG2_Ill_GATKHCSBGrefine_7959:HG2_Ill_250bpfermikitraw_15790:HG2_Ill_150bpfermikitraw_14873:HG2_Ill_breakscan11_1694:HG2_PB_HySA_21371;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14873:HG2_Ill_250bpfermikitraw_15790:HG2_Ill_GATKHCSBGrefine_7959:HG2_Ill_GATKHC_18963:HG2_Ill_Krunchall_16144:HG2_Ill_SpiralSDKrefine_2282:HG2_Ill_manta_3314:HG2_Ill_scalpel_11181:HG2_Ill_svaba_14705:HG2_PB_assemblyticsPBcR_3485:HG3_Ill_150bpfermikitraw_14895:HG3_Ill_250bpfermikitraw_15350:HG3_Ill_GATKHCSBGrefine_7853:HG3_Ill_GATKHC_18867:HG3_Ill_Krunchall_15830:HG3_Ill_manta_2710:HG3_Ill_svaba_14882:HG4_Ill_150bpfermikitraw_15022:HG4_Ill_250bpfermikitraw_15643:HG4_Ill_GATKHCSBGrefine_8174:HG4_Ill_GATKHC_18966:HG4_Ill_Krunchall_16399:HG4_Ill_manta_2813:HG4_Ill_scalpel_10865:HG4_Ill_svaba_14761;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.10084;PBcalls=7;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=1383;DistForward=37;DistMin=37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=10:133572774-133572854;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=513.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:35:1/1:2:18:4:15:1/1:1:19:0:14:1/1:0:47:./.:.:.:.:.:.
chr10	133861150	HG4_Ill_150bpfermikitraw_15030	TTGGCGGTGTACGGAGCTGTGTGTCCCCACCCTCCCGTCCCGCCCCCCGCAGGC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_14881:HG4_PB_pbsv_11767:HG4_Ill_svaba_14773:HG4_Ill_manta_2816:HG4_Ill_Krunchall_16406:HG4_Ill_GATKHC_18979:HG4_Ill_GATKHCSBGrefine_8181:HG4_Ill_250bpfermikitraw_15651:HG4_Ill_150bpfermikitraw_15030:HG2_PB_pbsv_11770:HG2_Ill_svaba_14716:HG2_Ill_SpiralSDKrefine_2286:HG2_Ill_Krunchall_16148:HG2_Ill_GATKHC_18977:HG2_Ill_GATKHCSBGrefine_7963:HG2_Ill_250bpfermikitraw_15797;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14881:HG4_Ill_svaba_14773:HG4_Ill_manta_2816:HG4_Ill_Krunchall_16406:HG4_Ill_GATKHC_18979:HG4_Ill_GATKHCSBGrefine_8181:HG4_Ill_250bpfermikitraw_15651:HG4_Ill_150bpfermikitraw_15030:HG2_PB_pbsv_11770:HG2_Ill_svaba_14716:HG2_Ill_SpiralSDKrefine_2286:HG2_Ill_Krunchall_16148:HG2_Ill_GATKHC_18977:HG2_Ill_GATKHCSBGrefine_7963:HG2_Ill_250bpfermikitraw_15797;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0186916;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0186916;PBcalls=2;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-53;DistBack=5461;DistForward=69;DistMin=69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=10:133861151-133861233;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=514.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:17:0|1:26:0:2:15:0|1:9:0:0:12:0/1:17:9:./.:.:.:.:.:.
chr10	134097778	HG2_PB_pbsv_11786	AGGGGCAGGTGAGGTTGGGGGGGGCAGGTGAGGTTGGGGGGGCAGGTGAGGTTGGGGGGGCAGGTGAGGTTGGG	A	10	PASS	ClusterIDs=HG2_PB_pbsv_11786:HG2_PB_assemblyticsfalcon_3613:HG3_PB_SVrefine2PBcRDovetail_5511:HG2_PB_assemblyticsPBcR_3505:HG3_PB_SVrefine2Falcon1Dovetail_7128:HG3_PB_pbsv_11484;NumClusterSVs=6;ExactMatchIDs=HG2_PB_pbsv_11786:HG3_PB_pbsv_11484;NumExactMatchSVs=2;ClusterMaxShiftDist=0.202899;ClusterMaxSizeDiff=0.202899;ClusterMaxEditDist=0.217391;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-73;DistBack=3399;DistForward=17;DistMin=17;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=126;REFWIDENED=10:134097779-134097977;PctSeqSimilarity=0.9817;PctSizeSimilarity=0.9865;PctRecOverlap=0.9333;SizeDiff=-1;StartDistance=-4;EndDistance=-5;GTMatch=0;TruScore=96;MatchId=516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:27:1|0:4:19:23:3:./.:10:3:66:2:0/0:11:0:./.:.:.:.:.:.
chr10	134169855	HG2_PB_SVrefine2PB10Xhap12_8509	GCCAAGATTGCCAGCTCTTAAGCTATGGGACATGGGATATCCTGAGTACCATCCC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1799:HG2_PB_pbsv_11790:HG3_PB_pbsv_11488:HG2_PB_SVrefine2PBcRplusDovetail_1492:HG2_PB_SVrefine2PB10Xhap12_8509:HG2_PB_SVrefine2Falcon2Bionano_5696:HG2_PB_SVrefine2Falcon1plusDovetail_1572;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1799:HG2_PB_SVrefine2PBcRplusDovetail_1492:HG2_PB_SVrefine2PB10Xhap12_8509:HG2_PB_SVrefine2Falcon2Bionano_5696:HG2_PB_SVrefine2Falcon1plusDovetail_1572;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0754717;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=3687;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=269;REFWIDENED=10:134169856-134170178;PctSeqSimilarity=0.9902;PctSizeSimilarity=1;PctRecOverlap=0.0909;SizeDiff=0;StartDistance=-50;EndDistance=-50;GTMatch=0;TruScore=69;MatchId=517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:30:0|1:16:2:6:28:./.:2:0:2:0:0/0:8:1:./.:.:.:.:5424:.
chr10	134555227	HG3_Ill_150bpfermikitraw_14916	TGTCCGCTTGCTTTACTCAATAGCCGACGTAAACTGAGGTGGACGTCAGTGTCCGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8292:HG4_PB_pbsv_11807:HG2_PB_pbsv_11816:HG3_PB_pbsv_11514:HG4_Ill_svaba_14807:HG4_Ill_manta_2818:HG4_Ill_Krunchall_16426:HG4_Ill_GATKHC_19010:HG4_Ill_GATKHCSBGrefine_8188:HG4_Ill_250bpfermikitraw_15675:HG4_Ill_150bpfermikitraw_15054:HG4_10X_allpass_2245:HG3_PB_assemblyticsfalcon_3588:HG3_Ill_svaba_14920:HG3_Ill_scalpel_11387:HG3_Ill_Krunchall_15851:HG3_Ill_GATKHCSBGrefine_7865:HG3_Ill_250bpfermikitraw_15379:HG3_Ill_150bpfermikitraw_14916:HG2_Ill_svaba_14748:HG2_Ill_SpiralSDKrefine_2306:HG2_Ill_Krunchall_16165:HG2_Ill_GATKHC_19009:HG2_Ill_GATKHCSBGrefine_7978:HG2_Ill_250bpfermikitraw_15819:HG2_Ill_150bpfermikitraw_14904:HG3_Ill_SVrefine2DISCOVARDovetail_8686:HG2_PB_SVrefine2PBcRplusDovetail_1506:HG2_PB_SVrefine2PB10Xhap12_8530:HG2_PB_SVrefine2Falcon1plusDovetail_1587:HG2_Ill_SVrefine2DISCOVARplusDovetail_1809;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14904:HG2_Ill_250bpfermikitraw_15819:HG2_Ill_GATKHCSBGrefine_7978:HG2_Ill_GATKHC_19009:HG2_Ill_Krunchall_16165:HG2_Ill_SpiralSDKrefine_2306:HG2_Ill_svaba_14748:HG3_Ill_150bpfermikitraw_14916:HG3_Ill_250bpfermikitraw_15379:HG3_Ill_GATKHCSBGrefine_7865:HG3_Ill_Krunchall_15851:HG3_Ill_scalpel_11387:HG3_Ill_svaba_14920:HG3_PB_assemblyticsfalcon_3588:HG4_10X_allpass_2245:HG4_Ill_150bpfermikitraw_15054:HG4_Ill_250bpfermikitraw_15675:HG4_Ill_GATKHCSBGrefine_8188:HG4_Ill_GATKHC_19010:HG4_Ill_Krunchall_16426:HG4_Ill_manta_2818:HG4_Ill_svaba_14807;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0181818;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.198198;PBcalls=7;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-55;DistBack=-90;DistForward=1361;DistMin=-90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=165;REFWIDENED=10:134555153-134555372;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=520.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:28:1|0:4:26:23:0:1|0:0:9:14:0:0/1:21:23:./.:.:.:.:.:.
chr10	134606067	HG3_Ill_GATKHC_18905	ACAGCATCTACACTGGGTCCGGGAACCGTGTGGGGGTGCAGCGTCTACACTGGGTCCGGGAACCGTGTGGGTGCAGCGTCTACACTGGGTCCGGGAACCGTGTGCGTG	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_7986:HG4_PB_assemblyticsfalcon_3529:HG3_PB_assemblyticsfalcon_3596:HG2_PB_pbsv_11824:HG3_PB_pbsv_11523:HG4_PB_pbsv_11815:HG3_PB_SVrefine2PBcRDovetail_5526:HG3_PB_SVrefine2Falcon1Dovetail_7150:HG2_PB_SVrefine2PB10Xhap12_8535:HG4_PB_SVrefine2Falcon1Dovetail_7182:HG2_PB_HySA_21452:HG4_Ill_GATKHC_19018:HG3_Ill_GATKHC_18905:HG2_Ill_GATKHC_19016;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_7986:HG4_Ill_GATKHC_19018:HG3_Ill_GATKHC_18905:HG2_Ill_GATKHC_19016;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0187793;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0560748;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-107;DistBack=7;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=786;REFWIDENED=10:134605405-134606297;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=521.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:25:0|1:22:6:2:18:./.:0:1:1:0:0/1:4:5:./.:.:.:.:.:.
chr10	134809985	HG4_Ill_Krunchall_16437	GCCCACGAAGACCCACCCACGGAGACCCACCCTGACCCCACGGAGACCCACCCTGAC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8309:HG3_PB_HySA_17853:HG2_PB_HySA_21489:HG2_PB_pbsv_11846:HG3_PB_pbsv_11542:HG4_PB_pbsv_11832:HG4_PB_HySA_17237:HG4_PB_assemblyticsfalcon_3549:HG4_PB_SVrefine2PBcRDovetail_5948:HG4_Ill_svaba_14825:HG4_Ill_scalpel_10900:HG4_Ill_Krunchall_16437:HG4_Ill_GATKHCSBGrefine_8195:HG4_Ill_250bpfermikitraw_15689:HG4_Ill_150bpfermikitraw_15068:HG3_PB_assemblyticsfalcon_3616:HG3_PB_SVrefine2PBcRDovetail_5535:HG3_PB_SVrefine2Falcon1Dovetail_7160:HG3_PB_HySA_17852:HG3_Ill_svaba_14934:HG3_Ill_scalpel_11398:HG3_Ill_SVrefine2DISCOVARDovetail_8692:HG3_Ill_Krunchall_15859:HG3_Ill_GATKHCSBGrefine_7872:HG3_Ill_250bpfermikitraw_15392:HG3_Ill_150bpfermikitraw_14927:HG2_PB_SVrefine2PBcRplusDovetail_1516:HG2_PB_SVrefine2PB10Xhap12_8547:HG2_PB_SVrefine2Falcon2Bionano_5723:HG2_PB_SVrefine2Falcon1plusDovetail_1603:HG2_Ill_svaba_14769:HG2_Ill_scalpel_11216:HG2_Ill_SpiralSDKrefine_2316:HG2_Ill_SVrefine2DISCOVARplusDovetail_1814:HG2_Ill_Krunchall_16176:HG2_Ill_GATKHCSBGrefine_7991:HG2_Ill_250bpfermikitraw_15835:HG2_Ill_150bpfermikitraw_14923;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8309:HG4_PB_assemblyticsfalcon_3549:HG4_PB_SVrefine2PBcRDovetail_5948:HG4_Ill_svaba_14825:HG4_Ill_scalpel_10900:HG4_Ill_Krunchall_16437:HG4_Ill_GATKHCSBGrefine_8195:HG4_Ill_250bpfermikitraw_15689:HG4_Ill_150bpfermikitraw_15068:HG3_PB_assemblyticsfalcon_3616:HG3_PB_SVrefine2PBcRDovetail_5535:HG3_PB_SVrefine2Falcon1Dovetail_7160:HG3_PB_HySA_17852:HG3_Ill_svaba_14934:HG3_Ill_scalpel_11398:HG3_Ill_SVrefine2DISCOVARDovetail_8692:HG3_Ill_Krunchall_15859:HG3_Ill_GATKHCSBGrefine_7872:HG3_Ill_250bpfermikitraw_15392:HG3_Ill_150bpfermikitraw_14927:HG2_PB_SVrefine2PBcRplusDovetail_1516:HG2_PB_SVrefine2PB10Xhap12_8547:HG2_PB_SVrefine2Falcon2Bionano_5723:HG2_PB_SVrefine2Falcon1plusDovetail_1603:HG2_Ill_svaba_14769:HG2_Ill_scalpel_11216:HG2_Ill_SpiralSDKrefine_2316:HG2_Ill_SVrefine2DISCOVARplusDovetail_1814:HG2_Ill_Krunchall_16176:HG2_Ill_GATKHCSBGrefine_7991:HG2_Ill_250bpfermikitraw_15835:HG2_Ill_150bpfermikitraw_14923;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0357143;PBcalls=16;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=5780;DistForward=1211;DistMin=1211;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=73;REFWIDENED=10:134809986-134810114;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:58:1/1:2:22:5:25:./.:0:9:0:4:1/1:0:34:./.:.:.:.:.:.
chr10	134828582	HG3_Ill_svaba_14938	AAGGCCTCTCCTGTGCACCTGCCCTCACTGCGGCTGGCAGGGACGGACGTGTCCGG	A	20	PASS	ClusterIDs=HG2_PB_HySA_21502:HG3_PB_pbsv_11546:HG2_PB_pbsv_11850:HG3_PB_HySA_17863:HG3_PB_SVrefine2PBcRDovetail_5536:HG3_Ill_svaba_14938:HG3_Ill_manta_2711:HG3_Ill_SVrefine2DISCOVARDovetail_8693:HG3_Ill_Krunchall_15863:HG3_Ill_GATKHC_18923:HG3_Ill_GATKHCSBGrefine_7874:HG3_Ill_250bpfermikitraw_15396:HG3_Ill_150bpfermikitraw_14932:HG2_Ill_svaba_14773:HG2_Ill_manta_3319:HG2_Ill_SpiralSDKrefine_2320:HG2_Ill_SVrefine2DISCOVARplusDovetail_1815:HG2_Ill_Krunchall_16180:HG2_Ill_GATKHCSBGrefine_7993:HG2_Ill_250bpfermikitraw_15840:HG2_Ill_150bpfermikitraw_14927;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14927:HG2_Ill_250bpfermikitraw_15840:HG2_Ill_GATKHCSBGrefine_7993:HG2_Ill_Krunchall_16180:HG2_Ill_SVrefine2DISCOVARplusDovetail_1815:HG2_Ill_SpiralSDKrefine_2320:HG2_Ill_manta_3319:HG2_Ill_svaba_14773:HG3_Ill_150bpfermikitraw_14932:HG3_Ill_250bpfermikitraw_15396:HG3_Ill_GATKHCSBGrefine_7874:HG3_Ill_GATKHC_18923:HG3_Ill_Krunchall_15863:HG3_Ill_SVrefine2DISCOVARDovetail_8693:HG3_Ill_manta_2711:HG3_Ill_svaba_14938:HG3_PB_SVrefine2PBcRDovetail_5536;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.0363636;PBcalls=5;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=1516;DistForward=1969;DistMin=1516;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=55;REFWIDENED=10:134828583-134828692;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:25:./.:24:9:5:6:1|0:0:7:14:1:0/1:20:20:./.:.:.:.:.:.
chr10	134894396	HG2_10X_SVrefine210Xhap12_8315	ATCCCACGTTGAGATCAGGGTAGACCTGGGAGACAGCTGTGCAGGCAGCAGCACTCTGATACAGGGAAGCCGGAGCCGCGGACCTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8315:HG2_PB_SVrefine2PBcRplusDovetail_1525:HG2_PB_assemblyticsPBcR_3558:HG2_PB_pbsv_11861:HG3_PB_pbsv_11560:HG3_Ill_250bpfermikitraw_15403:HG2_Ill_250bpfermikitraw_15844:HG2_PB_SVrefine2PB10Xhap12_8555;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8315:HG2_PB_SVrefine2PB10Xhap12_8555;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0693642;ClusterMaxSizeDiff=0.0578035;ClusterMaxEditDist=0.300578;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-85;DistBack=1038;DistForward=37;DistMin=37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=257;REFWIDENED=10:134894397-134894738;PctSeqSimilarity=0.9939;PctSizeSimilarity=1;PctRecOverlap=0.6279;SizeDiff=0;StartDistance=-32;EndDistance=-32;GTMatch=0;TruScore=87;MatchId=526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:20:./.:13:0:6:17:./.:1:0:5:1:0/1:28:20:./.:.:.:.:.:.
chr10	135131715	HG2_PB_assemblyticsfalcon_3687	ACACCCCCCCCAGACACAGAGATGGAAAGACCACACACCCCCAGACACAGAGATGGAAAGACCACACCCCCCCCCCAGACACAGAGATGGAAAGACCACACCTCCCCCCCAGACACAGAGATGGAAAGACCACACCCCCCCCCCCAGACACAGAGATGGAAAGACCACACCC	G	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_3580:HG4_PB_SVrefine2Falcon1Dovetail_7214:HG4_PB_assemblyticsfalcon_3599:HG2_PB_SVrefine2PBcRplusDovetail_1535:HG2_PB_assemblyticsfalcon_3687:HG2_PB_SVrefine2Falcon1plusDovetail_1619;NumClusterSVs=6;ExactMatchIDs=HG2_PB_assemblyticsfalcon_3687;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0410557;ClusterMaxSizeDiff=0.0410557;ClusterMaxEditDist=0.103448;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-171;DistBack=128;DistForward=-136;DistMin=-136;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1606;REFWIDENED=10:135130217-135131993;PctSeqSimilarity=0.9293;PctSizeSimilarity=0.9649;PctRecOverlap=0.4128;SizeDiff=6;StartDistance=95;EndDistance=101;GTMatch=0;TruScore=76;MatchId=527.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:12:21:./.:3:12:8:7:0/0:6:0:6:0:./.:0:0:./.:.:.:.:.:.
chr10	135380339	HG4_Ill_manta_2826	GGGTTAGGCTTAGTGTTGTTAGGGTTAGGGTTAGGGTTAGCATTAGGAGTTACAGTTGGGTTAAGGGTTGCA	G	20	PASS	ClusterIDs=HG2_Ill_svaba_14825:HG2_PB_pbsv_11902:HG4_PB_pbsv_11880:HG2_PB_assemblyticsfalcon_3704:HG4_Ill_svaba_14876:HG4_Ill_scalpel_10918:HG4_Ill_manta_2826:HG4_Ill_Krunchall_16459:HG4_Ill_GATKHC_19073:HG4_Ill_GATKHCSBGrefine_8214:HG4_Ill_250bpfermikitraw_15722:HG3_Ill_svaba_14994:HG3_Ill_scalpel_11431:HG3_Ill_Krunchall_15894:HG3_Ill_GATKHC_18969:HG3_Ill_GATKHCSBGrefine_7894:HG3_Ill_250bpfermikitraw_15430:HG3_Ill_150bpfermikitraw_14965:HG2_Ill_svaba_14826:HG2_Ill_SpiralSDKrefine_2338:HG2_Ill_Krunchall_16203:HG2_Ill_GATKHC_19080:HG2_Ill_GATKHCSBGrefine_8015:HG2_Ill_250bpfermikitraw_15869:HG2_Ill_150bpfermikitraw_14952:HG4_PB_HySA_17291:HG3_Ill_GATKHC_18968:HG3_Ill_GATKHCSBGrefine_7893:HG3_Ill_manta_2716:HG3_PB_pbsv_11593:HG4_Ill_svaba_14875:HG3_Ill_svaba_14993:HG3_Ill_Krunchall_15893:HG3_Ill_250bpfermikitraw_15429;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14952:HG2_Ill_250bpfermikitraw_15869:HG2_Ill_GATKHCSBGrefine_8015:HG2_Ill_GATKHC_19080:HG2_Ill_Krunchall_16203:HG2_Ill_SpiralSDKrefine_2338:HG2_Ill_svaba_14826:HG3_Ill_150bpfermikitraw_14965:HG3_Ill_250bpfermikitraw_15430:HG3_Ill_GATKHCSBGrefine_7894:HG3_Ill_GATKHC_18969:HG3_Ill_Krunchall_15894:HG3_Ill_scalpel_11431:HG3_Ill_svaba_14994:HG4_Ill_250bpfermikitraw_15722:HG4_Ill_GATKHCSBGrefine_8214:HG4_Ill_GATKHC_19073:HG4_Ill_Krunchall_16459:HG4_Ill_manta_2826:HG4_Ill_scalpel_10918:HG4_Ill_svaba_14876;NumExactMatchSVs=21;ClusterMaxShiftDist=0.102941;ClusterMaxSizeDiff=0.10219;ClusterMaxEditDist=0.132353;PBcalls=5;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=14;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=-71;DistBack=253;DistForward=31;DistMin=31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=132;REFWIDENED=10:135380245-135380447;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:26:0|1:24:3:3:27:0|1:87:3:0:30:0/1:19:15:./.:.:.:.:.:.
chr11	442403	HG2_Ill_150bpfermikitraw_14966	CCTCCCCCACCCCGGGCCACGGCCTCCCCCACCCCGGGCCACGGCCCCCCACCCCGGGCCACGG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_11914:HG2_PB_assemblyticsfalcon_3724:HG2_Ill_SpiralSDKrefine_2352:HG4_Ill_svaba_14902:HG4_Ill_scalpel_10933:HG4_Ill_Krunchall_16479:HG4_Ill_GATKHC_19102:HG4_Ill_GATKHCSBGrefine_8227:HG4_Ill_250bpfermikitraw_15742:HG3_Ill_svaba_15022:HG2_PB_HySA_21667:HG2_Ill_svaba_14850:HG2_Ill_scalpel_11254:HG2_Ill_manta_3333:HG2_Ill_GATKHC_19107:HG2_Ill_GATKHCSBGrefine_8025:HG2_Ill_250bpfermikitraw_15887:HG2_Ill_150bpfermikitraw_14966:HG2_PB_pbsv_11936:HG4_PB_HySA_17330;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14966:HG2_Ill_250bpfermikitraw_15887:HG2_Ill_GATKHCSBGrefine_8025:HG2_Ill_GATKHC_19107:HG2_Ill_manta_3333:HG2_Ill_scalpel_11254:HG2_Ill_svaba_14850:HG2_PB_HySA_21667:HG3_Ill_svaba_15022:HG4_Ill_250bpfermikitraw_15742:HG4_Ill_GATKHCSBGrefine_8227:HG4_Ill_GATKHC_19102:HG4_Ill_Krunchall_16479:HG4_Ill_scalpel_10933:HG4_Ill_svaba_14902;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0461538;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.121212;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-63;DistBack=-28;DistForward=16545;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:442402-442468;PctSeqSimilarity=0.9945;PctSizeSimilarity=0.9844;PctRecOverlap=0.3846;SizeDiff=-1;StartDistance=40;EndDistance=39;GTMatch=0;TruScore=78;MatchId=530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:36:./.:6:20:15:11:1|0:0:11:9:1:0/1:13:12:./.:.:.:.:.:.
chr11	469295	HG2_Ill_GATKHC_19109	AGGGGAGTCTCTGGGTAATCGGAGGGAGGAGGAGGGCAGTCTCTGGGTAATCGGAGGGAGGAGGAGGGGAGTCTCTGGGTAATCGGAGGGAGGAGGAGGGGAGTCTCCG	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_3612:HG2_PB_pbsv_11937:HG4_PB_pbsv_11916:HG4_PB_HySA_17331:HG2_PB_SVrefine2Falcon1plusDovetail_1649:HG3_PB_assemblyticsfalcon_3701:HG4_Ill_svaba_14904:HG4_Ill_GATKHC_19104:HG4_Ill_GATKHCSBGrefine_8228:HG2_Ill_svaba_14852:HG2_Ill_GATKHC_19109:HG2_Ill_GATKHCSBGrefine_8026;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8026:HG2_Ill_GATKHC_19109:HG2_Ill_svaba_14852:HG4_Ill_GATKHCSBGrefine_8228:HG4_Ill_GATKHC_19104:HG4_Ill_svaba_14904;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0657277;ClusterMaxSizeDiff=0.0657277;ClusterMaxEditDist=0.0758294;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-108;DistBack=-109;DistForward=2167;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=11:469294-469420;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=531.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:26:0|1:26:4:5:21:1|0:0:17:21:0:./.:5:1:./.:.:.:.:.:.
chr11	483144	HG2_PB_SVrefine2Falcon1plusDovetail_1652	GGTTCTGTGAGTTTTTCGTAGATCTCCCTACCGAGTGGAGAAGGTTCTGTGAGTTTTTCGTAGATCTCCCTACCGAGTGGAGAAGGTTCTGTGAGTTTTTCGTAGATCTCCCTACCGAGTGGAGAAGGTTCTGTGAGTTTTTCGTAGATCTCCCTACCGAGTGGAGAAG	A	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_7217:HG4_PB_SVrefine2PBcRDovetail_5980:HG4_PB_SVrefine2Falcon1Dovetail_7253:HG2_PB_SVrefine2PBcRplusDovetail_1569:HG2_PB_SVrefine2PB10Xhap12_8605:HG2_PB_SVrefine2Falcon2Bionano_5770:HG2_PB_SVrefine2Falcon1plusDovetail_1652:HG2_PB_pbsv_11940:HG4_PB_pbsv_11919;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1652:HG2_PB_SVrefine2Falcon2Bionano_5770:HG2_PB_SVrefine2PB10Xhap12_8605:HG2_PB_SVrefine2PBcRplusDovetail_1569:HG4_PB_SVrefine2Falcon1Dovetail_7253:HG4_PB_SVrefine2PBcRDovetail_5980;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00595238;ClusterMaxSizeDiff=0.00593472;ClusterMaxEditDist=0.0830861;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-168;DistBack=-8697;DistForward=-127;DistMin=-8697;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=633;REFWIDENED=11:482686-483486;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.994;PctRecOverlap=0.9822;SizeDiff=1;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=98;MatchId=532.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:34:0|1:19:4:3:24:./.:0:4:1:0:0/1:4:4:./.:.:.:.:.:.
chr11	487980	HG4_Ill_manta_2828	GGGGTGGGGGCTGCACGCACCCGTGGGCAGGGCCGGGCGTGGCCTGCGTCCCATACTCTGGCTGCCAGCC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1838:HG4_PB_pbsv_11920:HG2_PB_pbsv_11941:HG4_Ill_svaba_14909:HG4_Ill_scalpel_10937:HG4_Ill_manta_2828:HG4_Ill_Krunchall_16483:HG4_Ill_GATKHCSBGrefine_8229:HG4_Ill_250bpfermikitraw_15748:HG4_Ill_150bpfermikitraw_15118:HG2_Ill_svaba_14858:HG2_Ill_GATKHCSBGrefine_8027:HG2_Ill_250bpfermikitraw_15891:HG2_Ill_150bpfermikitraw_14971:HG4_PB_SVrefine2PBcRDovetail_5981:HG4_PB_SVrefine2Falcon1Dovetail_7254:HG4_Ill_SVrefine2DISCOVARDovetail_8478:HG2_PB_SVrefine2PBcRplusDovetail_1570:HG2_PB_SVrefine2PB10Xhap12_8607:HG2_PB_SVrefine2Falcon2Bionano_5771:HG2_PB_SVrefine2Falcon1plusDovetail_1653;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14971:HG2_Ill_250bpfermikitraw_15891:HG2_Ill_GATKHCSBGrefine_8027:HG2_Ill_svaba_14858:HG4_Ill_150bpfermikitraw_15118:HG4_Ill_250bpfermikitraw_15748:HG4_Ill_GATKHCSBGrefine_8229:HG4_Ill_Krunchall_16483:HG4_Ill_manta_2828:HG4_Ill_scalpel_10937:HG4_Ill_svaba_14909;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0431655;ClusterMaxSizeDiff=0.0431655;ClusterMaxEditDist=0.0431655;PBcalls=8;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=-69;DistBack=2249;DistForward=3538;DistMin=2249;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=144;REFWIDENED=11:487970-488182;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=533.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:21:0|1:20:3:4:16:1|0:0:10:13:1:0/1:32:10:./.:.:.:.:.:.
chr11	677316	HG2_Ill_manta_3334	CGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGAAGTCTACACTCCAGCCTGGGCAACAGATCAAGACTCCATCTCAAAAAAAAAACAAAAAAAGGATGAGCCACCACGCCCAGCCCTGAGGTAAGCTTTAAAGATGGAAAGAGTTTAGATAGGCAAAAGAGAGAATAATGAAACAAGCAAATGAAAATGAAAAGGTAAGTTTTTCATGAACAAGTTTCTTGCGCTGTCTGTGACAGTGAAAAATGGAAAACATGCATTTGCCACCAGCAGGGGAGGGTTCAATCAATCATGTATTGATCATATGCACCCTTTAAAAAAGTATAATGATGGCTGGGCACGATGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCATGAGGTCAGGAGTTTGAGACCAGCCTGACCAGCAT	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_712:HG2_Ill_MetaSV_724:HG2_PB_pbsv_11951:HG3_PB_pbsv_11635:HG2_Ill_tnscope_1326:HG3_Ill_manta_2719:HG3_Ill_GATKHCSBGrefine_7910:HG3_10X_allpass_2339:HG2_Ill_manta_3334:HG2_Ill_SpiralSDKrefine_2359:HG2_Ill_GATKHCSBGrefine_8030:HG2_10X_allpass_1926:HG3_PB_SVrefine2PBcRDovetail_5578:HG3_PB_SVrefine2Falcon1Dovetail_7227:HG3_Ill_SVrefine2DISCOVARDovetail_8716:HG2_PB_SVrefine2Falcon1plusDovetail_1663;NumClusterSVs=16;ExactMatchIDs=HG2_10X_allpass_1926:HG2_Ill_GATKHCSBGrefine_8030:HG2_Ill_SpiralSDKrefine_2359:HG2_Ill_manta_3334:HG3_10X_allpass_2339:HG3_Ill_GATKHCSBGrefine_7910:HG3_Ill_manta_2719;NumExactMatchSVs=7;ClusterMaxShiftDist=0.245411;ClusterMaxSizeDiff=0.245411;ClusterMaxEditDist=0.245411;PBcalls=5;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-454;DistBack=1032;DistForward=-454;DistMin=-454;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8512;REFWIDENED=11:668835-687498;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=534.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:16:0|1:22:1:1:15:0|1:54:0:0:11:0/1:52:16:0/1:27:6:.:.:.
chr11	772175	HG2_Ill_250bpfermikitraw_15897	TCGGGAGCCTCCGACCTCACCTCTGGCTGTGATGGGGGAGGACAGAGCAGGGAGCACAGCCTGCCTCGGCCTCCAGGCACTCACC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_3630:HG2_PB_pbsv_11957:HG4_PB_assemblyticsfalcon_3660:HG3_PB_pbsv_11641:HG3_Ill_GATKHC_19002:HG3_Ill_150bpfermikitraw_14990:HG2_Ill_GATKHC_19125:HG2_Ill_250bpfermikitraw_15897:HG2_PB_assemblyticsfalcon_3747:HG3_PB_assemblyticsfalcon_3723;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15897:HG2_Ill_GATKHC_19125:HG3_Ill_150bpfermikitraw_14990:HG3_Ill_GATKHC_19002;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0235294;ClusterMaxSizeDiff=0.0235294;ClusterMaxEditDist=0.035503;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-84;DistBack=-168;DistForward=60810;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=169;REFWIDENED=11:772176-772428;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:29:0|1:21:1:2:31:./.:6:0:0:5:0/1:22:15:./.:.:.:.:.:.
chr11	1142251	HG2_PB_pbsv_11974	CATGGTGTGTGTGTGCTTGTGTGTGTGTGTTTGCATGGTGTGTGTGCTTGTGTGTGTGTGT	C	20	PASS	ClusterIDs=HG2_Ill_scalpel_11268:HG3_PB_pbsv_11659:HG3_Ill_GATKHC_19012:HG3_Ill_GATKHCSBGrefine_7919:HG2_PB_pbsv_11974:HG2_Ill_GATKHC_19140:HG2_Ill_GATKHCSBGrefine_8039:HG3_Ill_svaba_15037:HG3_Ill_scalpel_11451:HG3_Ill_150bpfermikitraw_14999;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8039:HG2_Ill_GATKHC_19140:HG2_PB_pbsv_11974:HG3_Ill_GATKHCSBGrefine_7919:HG3_Ill_GATKHC_19012;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0650406;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.113821;PBcalls=2;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=12152;DistForward=71;DistMin=71;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=11:1142250-1142312;PctSeqSimilarity=0.9632;PctSizeSimilarity=0.9375;PctRecOverlap=0.7077;SizeDiff=-4;StartDistance=-15;EndDistance=-19;GTMatch=0;TruScore=86;MatchId=536.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:./.:15:6:7:23:./.:194:13:97:27:./.:4:0:./.:.:.:.:.:.
chr11	1387284	HG2_Ill_250bpfermikitraw_15907	TGGTTTGGGAAGCTGAAGAAGTTCTGGAGATGATGATGGTGGTGACAGGTGCACACCAACGTGAATGTATCAGGGACAGCTTC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_11961:HG4_PB_assemblyticsfalcon_3687:HG4_Ill_GATKHC_19129:HG2_Ill_GATKHC_19148:HG2_PB_PB10Xdip_5011:HG2_PB_pbsv_11986:HG4_Ill_250bpfermikitraw_15761:HG4_Ill_150bpfermikitraw_15131:HG2_Ill_250bpfermikitraw_15907;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15907:HG4_Ill_150bpfermikitraw_15131:HG4_Ill_250bpfermikitraw_15761;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0245399;ClusterMaxSizeDiff=0.0243902;ClusterMaxEditDist=0.0609756;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-82;DistBack=-60;DistForward=-57;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=493;REFWIDENED=11:1386862-1387436;PctSeqSimilarity=0.9935;PctSizeSimilarity=0.9878;PctRecOverlap=0.6747;SizeDiff=1;StartDistance=-27;EndDistance=-26;GTMatch=0;TruScore=88;MatchId=537.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:30:0|1:40:3:2:21:./.:0:4:14:0:0/1:25:10:./.:.:.:.:.:.
chr11	1825355	HG3_Ill_GATKHCSBGrefine_7928	AGGTGTGGAGGGCGGCGGGTGTGGAGGGCGGCGGGTGTGGACGGGCGGCGGGTGTGGACGGGCGGCGGGTGTGGAGGGCGGCGGGTGTGGAGGGCGGCGGGTGTGGACGGGCGGCGGGTGTGGACGGGCGGCG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1865:HG2_PB_assemblyticsfalcon_3791:HG2_PB_HySA_21732:HG2_PB_pbsv_12009:HG2_PB_HySA_21731:HG3_Ill_GATKHC_19037:HG3_Ill_GATKHCSBGrefine_7928:HG2_Ill_GATKHC_19163:HG2_Ill_GATKHCSBGrefine_8048:HG3_PB_pbsv_11684:HG3_PB_SVrefine2PBcRDovetail_5608:HG3_Ill_SVrefine2DISCOVARDovetail_8729;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8048:HG2_Ill_GATKHC_19163:HG3_Ill_GATKHCSBGrefine_7928:HG3_Ill_GATKHC_19037;NumExactMatchSVs=4;ClusterMaxShiftDist=0.140845;ClusterMaxSizeDiff=0.140845;ClusterMaxEditDist=0.147368;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-132;DistBack=-83;DistForward=-9;DistMin=-83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=100;REFWIDENED=11:1825338-1825569;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=539.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:23:0|1:29:2:1:29:./.:17:1:0:5:0/1:3:17:./.:.:.:.:.:.
chr11	1915275	HG2_PB_PB10Xdip_5064	CTGGAGTGTGGGAGTGTGTGTGTGTGTGTGTGTGATAGGGCCTCACTCTGTTTCCCGGGCTGGGAGTGTGTGTGTGTTTGTGTGTATGTGTGTGTGTGACAAGTTCTCTGTTTCCCAGGCTGGAATGTGTGTGTGTGTGTGTCAGAGCCTCACTCTGTTTCCCAGGCTGGGAGTGTGGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAGAGCCTCACTCTGTTTCCCAGGCTGGGAGTGCAGTGGCACAATGAGAGCTCCTTGCAGCCTCAACCTCCTGGGCTCAACGGATCCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACCGCAGGTGCCCACCACCACACCTGGCTAAGTTTTTGATTTTTTTTGTAGAGACGAGGTCTTGCTATGTTGCCCAGGCTGGCTTCAAACTCTTGGGCTCAAGCGACCCCCCCTGCCTCCACCTCCCAGAGTGCTGGGATTACAGGCATGAGCCCTGCACCCAAGGGTTTGTGCTTTTTTACAGTGTTACATAAATGGCATCCTGCAGCACGCACGCACTCCTTGTCTGACTTCTGTCACGTAGCATAACTATTCTGAGATCCATGCTTGCTGCTGTGTCTGTTGTAAACACTCATTTTTATTGCCACAGCATGGGTACACCCCAACCCGCTCATCTGTTCGTCTCTTGGTGGACATCAGGGTGGTTTCCAGTTTTGAATGATGGAAAGTAATGTGGCCATTTACATTCACACACAGGTTTTCAGAAGGACATACATTTCCTTTACTCTTGGGGAGAGGCCTAGAAATAAAACGACTAGATGCCGTGGGAGGTGTGTGTGAAACTTGTTCAGAAACGGCCTAGCTCTCATTTCTTGTTGCAGTTGGAATGGTTCATCTCGCTGACTTTGGCCCTTCCTAGACGTGGAGGGTGCGGTCTGTGATTTTGGCTTGCGTGTCTCCCGGCACCAGGGGTGCCGTGCAGCTTTGCACGTGCTACTTCACCACTGATACATCTTGCTGGGGGAAGCATCTGTTCAGATCTTTTGCCCGTTGCTGTAAAATTGGGTTATTTGTTTTCCTATTGTTGAGTTTGAGAGTTCTTTCTTTCTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGCGCCATCTTGGCCCACTGCAACCTCCGTCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAGGTAGCTGGAACTACAGGCATTTGCCACCACGCCGGGCTAATTTTTGTATTTTTAGTAGAGGTGGGGTTTCACCATGTTGTTCAGGCTGGTCTCGAATTCCTGACCTCAAGTGATCCGCCTGCCTTAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGAGAGTTCTTTGTATATATTCTGAATCAATCCTTGATGAAATAGATTTGCAAAGATTTTTCTCCTGGTTGGTGGCCTTGTCCTCTCACCGTTAACCATCTGAAGAGCAAATTTTAAACATTTTTGATGAATTTCAGTTTGTCAATTTGTTCTTTTAGGAATTGTGCTTTTGGTATCATGTCTGAGAAATCTTTGCCTTATCCAGAGCCATAAAGATTTTCTCCTGTGTTTTTATGGCTCCAGCTTTACATTTAGACCCACGATCCTTTTTGAGTTAATGTTTGTGTATAGTGTGAGGTACGAATGCAAATTATTCTTCTTTTTCTTTTTGCATATGGAGATCCAGTTGTTCCAGAATATGAAATTGCTGCAGCATGGTTTCTTGAAGAAGCTACAGTTGTGCACCGAGTCGCCTTTGCACCTTTGTCAAAAGTCTGAACTGTGCATGGTGGTGGGTGCCTGCGGTCCCAGCTACTTGGGCGGCTGAGGTGGGAGGATCCCTAGAGCCTGGGAATTTGAGGCTGCAGCGAGCAGAGATTGCACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACCCTGCCTGAAAAAAAGTCATCAGTCTGTGTGTGTAAGCTGATTTCTGGACCGTTTTCTTTTGGATCTACTTGAATATTTTTACACCAGTATCACTCAAGTTTTGCTTACACTGGTCTTATATGAATTCTTAGAATGTTAGCTCTTCAATTGTGTTCTTTTTCCGGATTGTTTTAGCTCTTCTCCTCCTCTGCTTTTCCATATGTGTTTTAGAATGGACCTGTGAATTTCTATAAATGCAGGGAGAGTTGACATCTTAACAGTATTGAACTTACTAATCCACGAACCTTGGATGTCCCTATTTATTCAGGTCTTCTTCCACTTCTTCCAAGGATTTTTTACTCTTTCAATTTGGAGGTCTTTCACATCTTTTGTCAGATTGACCTCTAAGTATTGTCTATTTTTATACAGTTAGGAAGTGGTATTTTTAATGTCAATATCTGATAGTTGATTACCATTTTATAGAAACACAATGGACTTTGTATATCAGTCTTGTTATTCCACAACCTTGTTAATCTCACTGAGTAGTTCTTGCAGGTTTTTCTTTTGTTGTTGATTCCATCGGGTTAGATGGTCACGTTATCTGTAGATAAGATTGTTTTCTTTTTCCTTTCTCGTCTGTATGGCTTTTATTTCTTTTGGGGGCCTAATTGCACGAGCAGGAACCTCCAGGTCAATGTTGGACGGAGGTGATGAGGGCGGACATCCCAGCCTCCTTTCTGTTCTTAGTGAGAAACTGTTCAGTCTTCCGCCATCGGTTGTGGGGTTTTCATAGATATCCTGTATTAGGTTAGGGAAGTTCCCTCTATTCCTAATTTACTGAGTGATGTTTTTTAAACAAATCAGGAACCGACGTTGGATTTTTCAAATGCTTTTTCTGTACTGTTAAAAGAAAAACCTTAGACAAATTAAATTTAACAGAGTTTAATTAAGCAAAGAACCACTCGCTAATGGGGCAGCCCCCAAACCAAAATAGGTTCAGAGAGGCTCTGGTGCTGCCGTGTGGCTGAAGATTGGTGGACAGAAAAGGGAAAGGAGGCACAGAAAACGGAAGCAAAGCACAGAAACCGCCAGAGGGGCTGCAGCTCCATGCTTGCCTTATCTGAACACGGTTGGAATGGCCGGCACCCTTGATGAGCGGAAACCTGGTGAGTGGCACAAGGGAAGGCTTCAGTCTGTTTACGTCTCCAGTGAGGTTTCAGTTCACAGTGGATGGAGAAGGCGGAACATAAACTATGTCAGGAGGCAGCTTTACGCCAAGCTTAATTTAACGATTTCCCCCTTTAGACATTGGTGTCCCTGTCGCCATTGTAAATGTACTTGTTTGGTCCCAAGCCCCACTGGGAAATAGCAGAACAATGGGTTTCGTAAGTGGGAACGAGGACCTCGGGTTATATATTTTTGTAAGGGATAGAGAGGAACCTCCTTGTGCTGGAATTTCATGTGCTCAGAAAAACAAACCCTGGTCTGCCTTAGGACCTATCTGCTTCCGTAAAGCTTCGGTTTGATGGTGTTGCGTTTAGCTTGCGTGACTCCATCTGGGTTTGGTCTGGTCCGTTGGGGCCTCTTGCGGGAGCTCAGTCCAAAACAATGGCCTCTTATAATTTTGTTTAAAAATTCCCTGCCTTTGGTCAGGTTCTCATTTAGTGGAAAGTGTAGCCAAGCCTTAGGGCCTTGGCACCACCCTCAGTCACCGCCACTTCCAGCTTCCGGTCACAGAATGTCATTCGTACCTAGGTTACGACATCCTCATGGCCTTGTGTTTCTTTGAGTTCTTGTTGCTCCAGTCAAAGAGACACCATTTAGCATCCTACAGATGGCTGCATGCAAACATTTAAAACTCCGGAGAGAATGCAGAGCGCCAGGGAGACGAGTATTATGACCATCAGGAAGATCATATTTAATACCAAGAATGTGAAGCATGCTCCTTAGGTGGGGTCCCATGAAGCAAACCAACGAAAATCAAATAGATCAGAGAGTTAGCTGGATAAAGAGTCTACTCATTTCAAACAAGCAGCCTGTTTGTTAATCCCCTACAACCGAACCTTTCTAATACCTGATACATTCCTCCATGTGCCACAAGAAGCATCGGCAACGGCACAGACGCTCCTCTGTTTAGCTAGTAAGGGATCCAGAGCAAGTCTATCATCCCACACACCTTTAGCAAGAGAATTTAAAGACTGTTGTGTAACCATAGCCTTTGGAGTAGAATCTGTTCCAGAGCCAATTACGAGGGATACTTTTTTTTTTTTTTTGAGACCGAGTCTCGCTCCGTCGGCTGGAGTGCAGCGGCGCCAGCCATGTCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCACGATTAGTTGAGATTACAGGCGCCCGCCATCATACCCAGCTTATTTTTAATATTTTTAGTAGAGATAGGGTTTTGCCGTGTTGGCCAGGATGGTCTTGATCTCTTGACGTTGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCAGCAGAGGGATACATTTTAAATCTTTGCCTCATTTACTCCAAACCATGGAAAAAGAGGCCTCACAAACAGTGCCCATCTAGAAGAGTGAAGCTCCTGCCAGAGTTCTCTTTAAGCTGTGATGTAGAGGAGTGGAGCGATGTTGTTTGTGATTGATTGGGAAGCAACAAAGGCACCCTCAACATTTTTCACCCAGACCGGGCACAGGGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCCGAGGTGGGCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGTCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCTTGGTGGTAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAAAGGTTGCTGTGAGCTGAGATCACACCACTGCATTCCAGCTTGGGCAACAGAGTGAGACTTGGAGTGAGCTAATTTTTTTTTTCACCTACATTGGCCCTTCGTCTTCCAACTGTCAAGGCAAAAGGTTGTCCACATATAGGATTGGCTGCAAAATCCTCCACAAATAAAAGTATACCCCATGAGTGCACATAAGAGATCCCTTTTTAGTTCTATTATTCAGAGGCATGACAGTCTCAAGTTCTTGGGAAAAAGCTGTCCATATCTGGGATGCCAGCTGCTTCTGGGGAGAAACTTCCCTGATTAGCTTTACCTTAAAATCTCCAATGGGGCTGCAGTTGCTGGAGTCTGGCGATGCCCTCTTGAGCGGTGAGATAACGAACCCAGGGTTCAAAGTCCTAGAATTTCACTGCAGTGTGGGTGGCAAGGGCAGTCTTTCTGTGATACTCTCAGAAAACCAAATGTCTGGGTTCTAGATTGTGAAGCGTTTGATAGGGTCCTCAGTGGACCATGAAAAGCTTTCTGTACCTGGTGAAAATATACTTAGGCATAATGCATTAAGGCCTAGGAGCCTTTAGCCATATCGGAGTTGAGGAGTGGAAGATACATGAGGTTCTATATAGGACTTCCAGGGACTATTTCATAAGGCACCAACTTATGTTTTCCACTGGAAATGGACCCGACGGCCATCCACCTGCAACACCCTTGACCAAGGCAGCCCAGTTCATTCATTTCCCTTGCTTAATATTATTGTATCTGTAACAAGTTATTAACAGTTTTACCACTTGAGCAGTGAAACAAGTACATCTATCATGGGAGATTTCTCAAGGGACGTCCCATGAGAAAAACAATTTTCTAATAATCTTTTAGCTACTGCTATAACATCAGTGCTCTTGCCTGGGAAAGCTTCTATATAACCAGAAAACACGCATTGAAAATGACAATTGAAGGAAATCCCTCCAGCAATGTTTCAATGGCCCATCAAGTAGCAGAAGTGTAATGGAAGTTTCGATTGTCCTCCCAGGATTATGGGTTTGGCAGACCAAACATTGGTCGTAAACCATTTTAACAACTTACAACGGTCACCATGTCAAATATATATATGTATATTATATATACATATATATATAAAATTTGGATTAATTTGTCTCTTCCATGATGAATCATGGAGTGCAGAGCATTTAATAGTGGAAGCTTCAAGGACACAGGAAGGACCAGGTGGCCATCTTGGCTGTCCATGTGTCCATGCTTGATGCTGGACTTATATCTTCTTAAATACCAATTTTGTTTCTCCAGTTCAGGTGCATAGCACTGTTTATTAGAAGGGTTATCATAGGTAATTTGACTTGGACGATGGATTTAATTCAAATTGGGTATCTAAACAATATCAGTACTGGCTGATTTAGCATGAAAAGCTGGCAAAGTGTTTTCTTGGTATTCAATTAATTTTTGTCCTGCCCAGGTTAGCAATTTTATAAACCAGTCAATCTTTCCATTAGAGTTCCGGGAATTTTTACCCAGTCCAAATGACATTACACTAAAGTTATCAGAAGCCTATTCAAGAGGGCTTATCAGGGTCCTTTCTCTCCTTTCACGAACCTCCTGGAGGACTCAATATTGTAGGACTGTGTGTGTTTGTGAGTTTTCAGAAACGTCAGAAAAAAGCAATTAACTCTGGAAATGACGTAAAATGGTCATGGTTAAAGAAGAACTGACAAGGAATTTTGATTACTTCTGTGGCCTACAATAACTTAACTGTAATTAAGAGTGACAGCATATACCCGGATGTATCAGAATTTTAGGAACCCCATACAATTTTGGAGCATATATTAATGACGTATTCACAAACAATATCTCAAATAAGGTTAAACATCATTTCTTATTTGGCAGTGCTTCCCATGTAATTTAATTTATCAAATACTTCTGTCTCTCTCTTTTTTGGATACTATAGGGGCCCTTAGTAGCTCTCTCCACTGGGAAAGGCTGTTATCGTCTTTGTTTTAAACTATAAACTAAGTTTCTCCCAAAGTTAGTTCAGCCTACTCCCAGGAATAAGCAAGGACAGGAATAAGCAAGGAGGTTAGAAGCAAGATGGAAGGGCCAGGCACGGTGGCTTACGCCTGTAACCCCATCACTTTGGGAGGCCGAGGTGAGCAGATCACAAGGTCAGGAGTTCCAGACCAGCCTGGCCAATATGGTGAAACCTCATCTCTACTAAAAAAAATACAAAATTAGTCGGGCGTTGTGGCAGATGCCTGTAATCCCAGTTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGTGGTGAGCCAAGTTTACGCCATTGCACTCCAGCCTGGGCGACAAGAGCAAAACACCACCTCTAAAAAAAAAAAAAGGCAAGATGGAGTCAATTAAGTTAGATGTCTCTCACCGTCTCAGTCAAAGAGACAATGCAAAGGTGGTTTCAGCTTTTTCCTAAATATTATCAGATACATGTCATACAGAGAGACATATAGTCATAACAGACACAGATAGAAACAGATCTTACAGATTTCAGAAAGAATTTTCATTTGCCAGCTTTCAAATAGTTTTCTTTTCCCCCTTTAGACTATCAATCTTCTAATTACTTGTTTTATCATCCTAAGCAATCGTTAGCTAGGGAACAATTTGCCTTCAAAAAAGATAACTCTTAGGTGAAACAAGGCAGAAAATGTATATATGAAAAGCTATTTAAGCTGAGACTTTCAGCTTAAATACTGTACCATCATCATTTGCTCAACCAAGAAAAAAGCAAGGCCCAGTGAAGACAACATGGCCAGGAAAAACACGTTAAACAAAGGTAAGACTTGTTACGTAAATTTAAAACAAAGGGATGTCCCTCCCAGACGTTGCAAATGGAAATGTCTTGTGGAGATGTAAATTTCTTTCACAAAATGGTTTCAAGGTAGCCGTTGAATGTCAGAAAGGTGCATTTTAGTTATTAGGCTGGTTGAAAAGTAATTGCAAAAACCACAATTATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAGATCCCGTCTCTACTAAAAATACAAAAAGTTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTCTGAACCCGGGAGGCGGAGCTTGCAGTGAGCAGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCTATCTCAAAAAAAAAAAAAAAACACACAATTACTTTCACACCAACCTGTGGATAGGTGGTCCTTCTAATGTGGCTACTGCTTCTTAGCTGAAATTACTGAGTACAGGGTGGGACCCATTAAGGAATAAGGCAAAGAAAGGCTTCCCTCGGCCTGGGCTCAGCGTGGGTGGATCTGAAGTAAAGCCTGCTGGATCTGAGAGACCTTTTAGACACACTTCATCTAGGATAGCTTTCTGTATGGGATAGTAACCAGGCCAAAAGCTCAGCAGATTCATTTTTTCTTATCAATTGGTCACTTAAGCTTTTTCTTTGTCTTAATTAATTTATATTTATGATCTTATTTTGTCTTTATCTTATTTGACAGGGTGTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCCATCATAGCTCACTGCAATTGTTACAGGAGAGGGGTCCTGATCCAGACCCCAAGAGAGGGTTCTTGGATTTGGATCCTGTGCAAGAAAGAATTCAGGGTGAGTCCACGGCGCAAAGCAAAAACAAGTTTACTAAGAAAGTAAAGGAATAAAGAATGGCTACTCCATAGACCGAGCAGCCCCGAGAGCTGCTGGTTGCCCATTTTTTGGTTATTTCTTGATGAGATGCTAAACCAGGGGTGGATTACTCATGCCCCCCACCCCTGCTTTTTAGGCCATACAGGGTAACTTCCTGACGTTGCCACGGCATCTGTAAACTGTCATGGTGCTGGTGGGAGTGTAGCAGTGAGGACGACCAGAGGTCACTCTCGTCACCATCTTGGTTTTGGTGCATTTTAGCCGGCTTCTTTACTGCAACCTGTTTTATCAGCAAGGTTTTTATGACCTGTATCTTGTGCCGACCTCCTGTCTCATCCAGTGACTTAGAATGCCTGACCATGTGGGAATGCAGCCCAGTAGGACTCAGTCTCATTTTACCCAGCCCCTGTTCAAGATGGAGTCGCTCTGGTTCACACGCCTCAGACACAGCCTCTGCCTCCCGCCTCAGCCTCCTAAGCAGCTGGGACTACAGGTGAGTGCTACCGTGCCTGGCTAATTTTTTTTTTTCCGTAGAGATAGTGGGGAGCTGTGGAGCGGGGGGTGGGGGGCGGGTGTCTCACTGTATCGCCCAGGCTGGTCTCAAACTCCAGGGCTTAAGCAATCTTCCCACCTTGGCCTCTCAAAGTGCTGGAATTACAGGCATGGGCCACCTTGCCAGGCCTCATTTGCCTTTTGTGCAGACACTTTTAAAAGAGGGAGTAAAAATACTGAAATCATTTTAGAAGCTTCTTCACATCAATTGGCATCCCTGATGAGGCTAATTAGGAGCCCTTGTTTTTAGGTGCACTTCTTAAAGTGCAGTGGTGTTCACTTGGAACATCCCACCGTAATTTTCATTCACCTTTAGTAAGATGCCACCATTTCTGTAAACATCTGCCGCGTCCGGGACCTAACACGTACGGACATACGAGCCAGAAGGTGCTCGGTTTTTCAGAGATGAAGGATCCCATTTTACATTAAATCTTGGCTTTGGCTCTTAGATCCTCGTGATCAACTGAGCAATGATTTTTCCCTGCCTTAGTGTGCAAGAAAAAGAAACCAAGAGAGTAGAACACGAACATCCTTGTGAATGTCCAAAAGCTGGAGTGTGCACCTCCTGCAGCCCTGCCATTTACAGCCAGTTTCCGCCTGACCCAGTCAAGACACACAAGGCCTCTAACTGCATCCAAGCCAGTGAATGATCAAATCAGATTCCATCCTGGACCCAGTCCAGTTTCTGTCACGACTTCTGAACCCAGCTTAGATAAAAAAATTTGCTCAAGCAAACTCAGATGGCTCAAAACACACATCCATGGAGCTTTGGAATCCAAGAGAGAACTTCCCACGATCCCCAGCTGCTCTGAGAGAGCAGAGGGCACAGTGGGCCCTGTGGGTCCTCCATTGGTCAGTCAGAGCTCCTGGGGGCCGCTGGAAGCTCTACGCCAGATCCACTTCTGATGCCATCCGTTTAAAGAGAAAACTTGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATTGCCTGAGCTCAGGAGTTCAAAACCAGCCTGGGCAACACGGTGAAACCCCGTCTCTACTAAAATACAAAAAATTAGCCAGGCATGGTGGTGCATGCCTGTAATCCCAGCTACTCCAGAGACTGAAGCAGGAGAATTGCTTGAACCTGGTAGGCGGAGGTTGCAGTGAGCAGAGGTGGCACCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTATCTCAAAAAAGAAAAAAAAAAGAAGAAATTTAAGGCCAGGTGCAATGGCTTACATCTGTACACCTGTAATTTCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACTTGAGGCCAGGAATTCGAGACCAGCGTGCCACCACACCCAGCTAATTTTTGCATTTTTAGTACAGATGGGGGTCTCACTATGTTGGGCAGGCTAGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGAGAGCCACTGCGCCCAGCCTCTTTATTCTTTTAATCTCTGCAGAACCTGTACTCCCGCTGCCTCTCTTGTTCCTGATATCGGTAATTTCTATCCTTCTCCTCCTTTCCCCGGGCCCTTCCCCATCAAGTTGGCTAAAGGTTTATCAGGATTACTGATATTCTTAAAGAACCAAGTTTTGGTTTTCTCAATTTTGTTCTATTATTTATTGTTTTCTGTTTTATCAGCTTCTACTTGATGTTTACTATTTCCTTTCTTCTGCCCACTTTGGGTTTAATTTGCTTTTCTTTTTCTATTTTCCTTAAGCTGAGAGCAAGGTCATTGCTTGAGAATTCTTTTTTTTTTTTTTTTTTTTTGGAGACCGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACGTCTGTCTCCCAGGTTCAAGTAATTCTCCCTGACTCAGCCTCCCGAGTAGCTGGGATTACAGGCACACGCCACCACACCTAGCTAATTTTTAAATTTTAATAGAAACAGGTTTTCGCCATGTTGGCCAGGCTACTCTCGAACTCCTGACCTCAGGTGATCCGTCTGCCTCAGGCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTTCTCTCTTTTTTTTTTTTTTTTTTTTTCTGAGACAGAGTGTCGCTCTGTCGCCCAGGCTGGAGTACAGTGGCGTGATCTCAGCTCACTGCAACCTCCGCCTTCTGGGTTCAAACGATCCTCGTGCCTCAGCCTCTCTAGTAGCTGGGATTATAGGCGTGTGCCACCACGCCTGGCTAATTTTTGTATTTTTGGTAGAGACGGGGTTTCTACCAAACCCTGGTAGAAATGTTGCCCAGGGTGTTCTTGACCTCGTGGGCTCAAGCAATCCTACCACCTTGGGCTCCCAAGGTGCTGGGATTACAGGTGTGAGCCACCACACCTGGCCAGTTAAACCATATTTCTTACAGGCAGCACAGAGTTGGGCTTTGCTTTTTTATCAATCAGACAACCTCTGCTTTCTTTTTGTGGGGGGGACAGGGTCTCACTGGCATCCAGGCTCGAGTGTATTGGTGCAATCACAGCTCATGGCAGCCTTGACCTCCAGGGCTCAAGGGATCCACCTGCCTCAGCCTCCCGAGTAGCTGTGACTACTGGCACATGCCACCACGCCCAGCTAAAGTATTTTTTTTTTTTTTTTTGGAGAGATGAGTTCTCCCTCTGTTGCCCAGGCTGGTCTTGAACTCCTGGACTCAAGGGATCCTCCTCTACCAGCCTCTAAAAGTGCTGGGATTACAGGAGTGAGCCACCATGCATGGCCCCTCTGCTTCTTAATAGGGGAGTTTAGCCCATTGATATTTAATGTGCTTACTGGTATGGTTAGGTTAGAGTCTGTCACCTTGTTATTTGCTTTCTATTTGTCACATCTGTTCTTTTCTCCCCTTTACTCTTTTTCTGCCTCCTTTTGCGTTCATGAGAAGTTTTATTCGTTACATCATCTTGTTTGCTGGCTTTTTCGCTGTAACTCTTTGTTTTGTTATTTTAGGGGTTGACTTGGGTTTTTAGTTGTTAGCTTTAACGTCCCACAGTTGGCTCTGAGTGACTGATATTTCCTCTTTTTTATGGGTCACCCTTTCCTGCTTCTTTGTCTTTTTGATAATTTTTTATTGGAATGCAGACATTGTAAACTTTAACTCGGGTGGGAGCTAGATACTTTTATATTTCCACAAATATTCCTGAGCTTTGTTCTGGAATGTAGCTGTTTATCTGCAAGCAGTTTGATCCTTTCAAGTATTACTTTTACCGTTTGTAAGGGAGGTCTGGAATAGTGTGGGCTAACTATTCCCCACTATGGAGGCAAGCTGTTTCTGAGCCCCCCACCGCTGTGCGTGATAGGGTTTTCTGCTGAGGCTGGTGGGAGCAGACACAATTCCTAGGTCCATGTGAGCTCCCGGCACTGGTCTCTCTAGTCCTTTCGGATTGTGCTTTCCCGCCTTGGGACGTTTTCCCTGGGATGTGCTGATGGCTCAGTCCCTAATACTCCAGGGGGACTCTCGGGTCTCAGCTTCTCTCTCTGGGCAGCTCTCTGAGCTTCACGAACTTCAGCTGCCTGGAGACCCCCAGCTCTGTCTCATCAGCTCAGGGACTCTGTGGGCTCCACCTCAACTCCCGCTTCCCGCACTGAGGCCTGGAAACCCACCAGAAAGTGCATGGGCAGCGAGAGGCCCCTGAGGCCAATTCCCAGCCCGGGAAGCACTGTTGTGCACGGCCCACGTGTGGGATCTTGAGAGCCATTGTGTTGTGTATTTTGTCTGTTCTGTGTTGCTGTTTGGTTGTTTCATTGTCCTGTGTATTTTGTCTGTTCTGTGTTGCTGTTTGGTTGTTTCAGGCAGGAAGATAAATCCAGTCCCTGCTACCCCATCTCAGCCAGGAGTGGAAATCTGCCTTTTAATTTTGGTGGACATGTTTGGATAGACAGAAACTTGAAATGGTGAAGTGGTGAAATGGGCTGAGCTGCCCTTTTCTTCCATCATGTTTCCACTGTTCTAAAGCTGGAAACATTGTTCCCCAGCATGAAAGCAGATAAGTGTGCAGCACACATCTCTCTAGCTTATTTATCTATTCGAGATGGAGTCTCGCTCTGTTGTCCAGGCTGGAGTGCAGTGGCGCAATCTTGGCTCACTGCAACCTCGGCCTCCAGGGTTCAAGTGATTCTCCTGCCTAAGCCTCCCCAGTAGTTGGGATTACAGACTCCCGCCACCATGCCCGGCTTATTTTTTTATATTTTTAGTAGAGACAGGGTTTTGCCATGTTGGCCAGGCACGTCTCGAACTCCTAACCTCAGGTGATCCAACCGCCCCGGCCTCCCAAAGTGCTGGGATAACAAGCGTGAGCCACCGCGCCCGGCCTCTAGCTTTATTTTTAACCATTTTTTTTTTCACATGTCGTAGCCTCTGTAATTCACCTGGAATGTATTTTGGCATTTGATGTGGAGAGCAAATCTCACTGCCTTTTTTTCCTCCCCAGTGCATACCTGATTTTCTCGACCTCTTTTATGAAATATCCCCGCCAGACTCCCTCGACCGTGCCACCCCCAGGTTCCCGTGCATACACAACATTGCGGGATAGGTATTGTGGAATGAGGATCCGTGTTACGACCTACAGAAGATGTGGCTGTGAAGTCAGGAGTCACGGTCTCAGAGTTGACTGCACTGCCTCGTAGCTGTGTGACCTTCAGGATTTTGTTCAACCCCCTCTGAGCTTCAGTTTGCTCTCTGGGAAGACTCCAAGGATAAGAGCATCTACCTCCTCAGCCTGCTGTGAGAGTTAACAGGGCCAGGGCCAAAGACGCTTTGTCTGACTGCTGGTCTGCGGGGAGCTCTAAATATGAATCTGCTACATCACCTTCACTTTTGAATTCGGCTCTGATGTTCCAAATGTTCTTGGCCGTTCCTTCGTGTTTCTCCTGTACGAATTTCAGCTTCTTTTTGCCAAGTATCTCCCCACCCCCGCCCACCCCCACCCCCAAATAAACTCACTAGAATGTTGGCTGAAAATCTGATAAGGCTACACATTGATTTGGAAAGAAATGATTTTTTGTGAGAGTCAAACTCCCTACCCATTTTTTTTCTTTTGTTTTTTCAAAAGTTTTTTTCTTACATTTGTCATTCAAGTTTGTCATTTTCTTGCTACAGATTCCAAACACTTTTCAAGAGGACCGTCGCTAAGTACTTTATACTCTTGTTTGGGTTTTTTTAGAGTAAAAAATGTTCAAATTCTACTTTATCTTCTAGCTGGTGGTTGTTGGAAGATAATTTTAAAAACTGATTTAAAATATGTATTTTGCATCTGGCCGCGTTCCTGAATTCTCTCATTCTTTCTGAAAACTCTTCCGCCGACTCTCTGGGGGCTCCTAGGAATGTGCTGTTTTGGCTCCTCCTTTCCAGAACTTATACGTCTCATTTCCGCCTCACATCATTGGCATTGTCCTTCATTTCCAGACCAGGGTCGAACAGTAATGGTAAAAGCAGGCATCCTTCTTTGGTTCCTGTCTTGGGCTGGAACGCCTTAGTGTTCCCCCAGCAAGGGGAGATAAAGGAAGTGCTTATTTATAGTTTTCTATAGTTTCTTGAGCCTTCGTGTTGTTTTGCTTTCAGAAACAAGAATTGACTTTTAGCAAATGCCCTTCCCCCTATAGTTAACAATTAGGAACTATTCAAACTATGCCAGTAGGCATAAATAAAGTTAGGAAGAGCCCCCATCTACCCAGCCCCCACTTAGCTTAAGAAAGACAACATGGCTGGGCATGGTAGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTCGAGTCCAGGAGTTTGAGACTAGCCTGGGCAACACAGTGAGTCTCTACAAAAAATACAAAAGTTGGGCCTGGGTACGGCGGCTCACACCTGTAATCCCAGCACTTTGCGAGGCTCGAGTCCAGGAGTTTGAGACTAGCCTGGGCAACACAGTGAGTCTCTACAAAAAATACAGAAGTTGGGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTAGCCAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCACGCGCCTGTAATCCCAGCTACTCGGGAGACTGAGGCAGGAGAATTGCTTGAACCCAGGAGTCGGAGGTTGCAGTGAGCCAAGATCATCACTGCACTCCAGCTCGGCGACAGAACAAGACTCCGTCTCAAAAACAAAAACAAAAACAAAAGTTAGCCAGGCATGGCAGTGGGCACCTGTAGTTCCAGCTACTCAGGAGGCTGAGATGGGAGGATCACCTGAGCCTGGGAGGTTGAGGCTGCAGTCAGCCGTGGTGGTGTCATTGCACTCCAGCCTGGGCAACACAGTGAGACCCTATCTGAGAAAAAAAGAAGAAGAAGAAGAAGAAGAAATACAACGTGATGGCTTCATCTGAGTTGAGGGCTCTGTGCAGCTCCTTTGTGGTGGAATCCTCTGCTCTGCTGGCAGGGACGTTTCATCATAAGTGTGTGTTCTGTATATCCAGGTGCAAGTGATATTTTAAAATATAAAACTATTGTTTAAATTTCATGTAAGTAGCATGATTTTTCCTTTTGCAACTCTTTCACCCCCACCCCAATGTGGTTGCTGTGTCCGGGACTTCGCCATTGGTGGCTCACAGCCGCAGGTCAGCTGTAATCGTGCAGAACCCATCTATGAATACACGACGGTGTACCTGTCCATTCTCCTCTTGGTGAATGTGTGGAGGTTTTCTGATTCTTTGCAGTGACCAACAGCAATCTGTGCCCAGCAATGCAAATGCCGGACTGAGGGATGCACCCTGCACGCTGGCCAAGATGTCACTGGGCGCCATTGTGGTGTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGACTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAAGTTCTGCCTCCCGGGTTCAAGGGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGTCCAGCTAAGTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCAAGTGATCCAGCCACCTCGGCCTTCCAAAGTGTTGGGATTACAGGCGTGAGCCACCGTGCCTGGCTGGGGTTCTCTATTTTCAAGACACCCTTTTAACTTTATAAGTAATCAATCAGGTGGTTCTTCGAAACTGAACATTCTGACCCCCGTTAACTTTCACCTGCGACTTGGGCGTCCAGTGACAATCCTTGTCTCAATCAACGATCCCATCAATGGTTGCAAAATGGTGCATTCTTAACGCTATCATTTCACCTCCGCTGAGCTGGTGTTCTGCAGAAATGAACTTTTCCTTCTCCAGACTGATGTTTATATTTTGTTCATCCACTTTGCAGTTTTAATTTGGTTTCCCCTTTCATGGGTGTGCTGACCATTCAGGTTCTCTTCTCTGCCAGCTGCCTGTCACCTCCTCTCGCCCATTTTTCTATTCAGTTGCTTGCCTTTTTTCTAATGGTGTCCTACCTTCTTTTTAGATAGTGAAAACTAATTCTTGATCAGTGATATGTGTTACAAACATCTCCTCCCAAAAGATGGCTTGTTTTTTTTGGCTTGGTTTATGGTGTCTTTTGATGAAGAGAAGTTCACTTATTAAAAACTGTAGTTATTTCTTGTTGAATTTACCAATCTCTTTATTCTCTGGTTTGTGGTTTTTACATCTTGTTGAACAAATGTTCCTTGCTACTAGCCGGGCGCAGTGGCTCACGTCTGTAATCCCAGCACTTTGTGGGGCTGAGGAGGGTGGATCACCTGAGGTCAGTTCAAGACCAACCTGGCTAATGTGGTGAAACCCTGTCTCTACCAAAAATACACAGATTAGCTGGGTGTGGTGGTGGGCGCCTGTAATCCCAGCTACTAGGGAGGCCAAGGCAGGAGAATTGCTTGAACCTGGGGGACAGAGGTTGCAGTGAGCCGAGATTGTGCCACTGCACCCCAGCCTGGGTGACAGAGTGAGACTCTGTATCAAATTAAAATAAAATAAAATATAAATTAATAAGTGGCACGATCTCAGCTCACTGTAGCCTCTGCCTCCCGGGTTCAATCGATTCTCCTACTTCAGCTTCCTGAGTAGCTGGGATCACAGGCACCCACCACCACGCCTGGCTAATTTTTTTTGTATTTTTGGTAGAGATGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATTCGCCTGCCTCGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGTCACTGCGCCCGGACCTCCCTTCTGTTCTTAGTTGACCAGAATGTCTATCTATGAGTGGTGTTATATTTTATCCAAAATTTTTTGTAGTCTTTACATGCTTTATGTGTTGTGAATCACTACATCATTCAGTTTTCTGATGTACAACTATTATTACATTAAAAAGAACCCCCGAGGCCGGGAATGGTGGGTCTCACCTGTAATCCCAGCACTTTGGGAGGCCGAGCTGGGAGGATCACTTGAGGCCTGGAGTTTGAGACCAGCCTGAGCAAGATAGTGAGTGAGACCCCATCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAGCCAAGTGTGGTGGTACATAGCTGTGGTCCCAGCTATGTGAGAGGGTGAGGTGGGGGAGATCGCTTGAGCCCAGGAGTTTGAGGCTGCAGTGAGCCAGGATCTCACCATTGCACTCTGGCCTGGGTGACAGAGCAAGACCTCATCTCTTTAAAAAGGTAAAATTAAAAAAATAATAATAAAGGACCCCCTTGGTCATAATGTAATTGAAAAAAATTCTTGCTGTTTTTTGCTTGGTAGGAGGTTTAACTACTGGTTCCTTGTCTTTTTTTTTGTCTTTGCACCCCTGATTCGGAATGCAAGGTTCAATGTCTTTAAAATGAATTAGTCTATGCAAGGTTTGAACTTCACTTTGAGTCAATTCCATGTTCTATTTCTCCTGGGAATGGGCTGTTTTGCTCAGTTTTTAAATTGTCATAAAGTTGTTTATGGGATTCTTTCACCACAATGTCATCTCTGCAGCCTTCGTCATTACGTTCCTCTTTTCGTCGACATTGCTTATTTGTGTCTCTTCCTCTTTCTACTAATTTTTTTGCCAGATGTTAGACTATTTATTAGTTTTTTCACATAAACCATTTCTAAATTATTTATTTATTTTTAAGCCAGAGTCTCACTCTGTCGCCCAGGCTGGAGCGCAGTGGCGAGATCACGGCTCACCGCAACCTCCGCTTCCTGGGCTCAAGTGATGCTGTCACCTCAGCTTCCCAAGGAGCTGGGATTACAGGCACCTGCCACCACGCCTGGCTAATTTATTTTCATTTTTTGTAGAGATAGGTTTTTGCCATGTTGCCCAGACTGATCTGGAACTCCTAGGCTCAAGTGATCTGCCCTCCTCGGCCTTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCCCGGCCAACACAGCAGCAATATTTAATTTTGTTGATCTTCATTAATTTTTATTTTTCATTCTATTAACCTCCTATGTTTCTTATTATTTCCATTGCTTTCTTTCCCTTGGTTTTAGTGTTTTGTTCATTTCCTAATTTCATAAACTAGATGCATACTTATTAATACTTTCCCCTCTCTATTTTTTTGTTCTGGGGTAATCCATACTTTGTTTTCTTTGTTTTTTGGTTTTCCTCCTTTCTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATTTCGGCTCACAAACCTGCCTCCCAGCTTCGCGCCATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGACTACAGGCACCCACCACCACGCCCAGCTAACTTTTTTGTTTTTTTTTTTTTGTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTGTTAGCCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTCCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCCCGCTTTCTGATATAAGCATCCAGGCCTCGCATTTCCCTCTGTCTTGTTTTAGCTGCACCCAGGGCTTTGCTCTGGGGTCTCCCATTCTCCTTCAGTTCCAGCCTCACCCACTCTCCCTGACCACGTCCCCTCTGATCCCTGAGCTATTCAGGTGTGTTTTTACTTTCTAACCCTTGCTGAAAGGGCCGCCTTCTAGTTAGTTGGGTTCTGACTTGGCCGCAGAGGGCAGACAGTTGGCTGGGGCATTCTCGTGTCCATGGCCAGCTTTGGTCACTGTCTCTCACGTGTCCTCTGGTTTGGAGGCTCTGCTTCAGTCCCTGTCTGTTCCACTAAGCCAAGTCGTTTCGTTCCAGTCCTAGACGCCTCACCCCGCGCTCTGCGGTGAGCACGAGCTGTGCACTGGGATCGCGGACTCCTTTTCCCTCGTCATGCTGCCACGGGCTCCCACTGCACTCCCAGTCCCAATTGCAGGATGCGTGGGGGACGGAGCCCCTGTCCATGGGTGGTGACCACCTCTGTGCCCAGCATAGCTGCTTGCCTCCTGTCCATTTGGTGCTCCTGGGGGGCCTTTCAGAACCAGGCAGCACAGCAAGATTGGTGACATCCAACCAACAGATTTCACCCGGGCGTACCCCGGTTCCCACCTGTGCATTACCCAATGAACACGCCTGGTTGGGCGCAGCGTAGCTGAGACTCCCATGTGCAGGCCTGCTGTGGGGGTGCAGGCCCACGGTGCACATTGGTGTGTGTTGTGGGGTCACACACCTGGGATGATGTTTCTGTGTGTGTGTGTGTGTTGTAGGGTCACACATCTGGGATGATGTTCTGTATGTGTGTGTGTGTTGTGTGTGGGGTCATGCACCTGGGATGTCTCTCTGTGTGTCTGTATGTGTTGTAGGGTCACGCATCTGGGATGATGTTGCTCCTTATGTGTGTGTGTGTTGTGTGTGGGGTCACACACCTGGGATGATGTTTCTCTGTGTGTGTGTCTGTGTGTGTGTTGTTGGGTCACACACCTAAGATGTTTTTCTTTGTGTGTGTGTGTGTGTGTTGTGTAGTCACACACCAGGGATGATGTTGCTCTGTGTATGTGCCTATGTGTGTTGTAGGGTATATACACCTGGGGATGTTGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGGGGTCACACACCTGGGGATGATGCTCTGTGTGTGTTGTGGGGTGTACAAACCTGGGGAGGATGTTGCTCTGTGTGTGTTCTGGGGTCACACACCTGGGGATGATGTTGCTCTGTGTGTGTGTTGTGGGGTCACACACCTGGGATGTTTCTGTGTCTTTGTGTGTGTGGGTTGTGGGGTGTACACACCTGGGGAGATGTTGCTCTGTGTGTGTTGTGGGTGTACAAACCTGGAGATGTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGAGGTCACACACCTGGGATGATGTTGCTCTGTGTGTGTCTGTGTGTGTGTTGTGAGGTCACACACCTGGGGATGATGTTTGTGTATGTGTGTGTTGGGTGTACAAACCTGGGGATGATATTTCTCTGTGTGTGTGTTGTGGGGACACACGGATGATGTTTGTGAGTGTGTGTGTGTATGTGTTATGGGGTCACACACCTGGGATGTTTCTCTGTGTCTGTGTGTTTTGTGGGGTCACACACCTGGGATGATGTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGGGGCCACACAACTGGGATGATGTTTCTCTGTGTGTGTGTGTGTCTTGTGGGGTGTACACACTTAGGGATGATATTGCTATGTGTGTGTGTTCTGGGATCACATCCCTGGGGATGATGTTATTCTCTGTGTGTGTGTTGTGGGATAGGACATCTGAGATGATGTTTCTGTATGTGTGTGTCTGTGTGTTGTGGGGTCACACACGTGGGATGATGTTTCTGTGTGTGTGTGTCTGTGTGTGTATGTTGTGCGGTCACGCACCTGGGATGATGTTTCTGCGTGTGTGTGTATGTGTTGTGGGGTCACACACCTCAGATGATGTTTCTTTGTGTGTGTTGTGGGGTCACACACCTGGGATGTTTCTGTGTGTGTGTGTGTTGTGGGGGGTGATGTTTCTGTGTGTGCATGTGTTGGGGGGGATATTATTTGTATGTGTGTGTGTGCGGGGTGATGTTTCTGTGTGTGTGTGTTGTGGGGGGTGATGTTATGTGTGTGTGTTTTGGGGGGGTGATGTTTCTGTGTGTGTGTGTGTTGTGGGGAGGTGTGTGTGTTGGGGT	ATG	20	PASS	ClusterIDs=HG3_Ill_MetaSV_718:HG4_PB_pbsv_11986:HG2_PB_pbsv_12014:HG3_PB_pbsv_11688:HG2_Ill_MetaSV_731:HG2_PB_PB10Xdip_5065:HG2_PB_PB10Xdip_5064:HG2_Ill_tnscope_1328:HG4_Ill_MetaSV_758;NumClusterSVs=9;ExactMatchIDs=HG2_PB_PB10Xdip_5064:HG2_PB_PB10Xdip_5065;NumExactMatchSVs=2;ClusterMaxShiftDist=0.000369004;ClusterMaxSizeDiff=0.000369004;ClusterMaxEditDist=0.000415148;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-21678;DistBack=-45784;DistForward=23900;DistMin=-45784;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=11:1915278-1936957;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=0.9999;SizeDiff=0;StartDistance=-2;EndDistance=0;GTMatch=1;TruScore=99;MatchId=540.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:55:67:./.:23:16:21:19:./.:157:210:180:147:1/1:0:18:1/1:17:328:.:2311:1
chr11	1971844	HG2_Ill_Krunchall_16255	TGTTTCCCGCCCACCCCTGTTGTGAGTGGACACGCGGGGGTCTGCAGGGTTAGCTACCCTGTTTCCCGCCCACCACTGTTGGGAGTGGACACGCGGGGGTCTGCAGGGTTAGCTACCCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8389:HG4_PB_assemblyticsfalcon_3713:HG3_PB_assemblyticsfalcon_3783:HG2_PB_assemblyticsfalcon_3794:HG3_PB_SVrefine2Falcon1Dovetail_7271:HG2_PB_SVrefine2Falcon1plusDovetail_1700:HG3_Ill_MetaSV_719:HG4_PB_SVrefine2Falcon1Dovetail_7303:HG4_Ill_svaba_14942:HG4_Ill_MetaSV_760:HG4_Ill_Krunchall_16512:HG4_Ill_GATKHC_19146:HG4_Ill_250bpfermikitraw_15778:HG3_Ill_svaba_15057:HG3_Ill_Krunchall_15939:HG3_Ill_GATKHC_19039:HG3_Ill_GATKHCSBGrefine_7929:HG3_Ill_250bpfermikitraw_15485:HG3_Ill_150bpfermikitraw_15015:HG2_Ill_svaba_14896:HG2_Ill_manta_3341:HG2_Ill_Krunchall_16255:HG2_Ill_GATKHC_19164:HG2_Ill_GATKHCSBGrefine_8049:HG2_Ill_250bpfermikitraw_15920:HG2_Ill_150bpfermikitraw_14999:HG4_Ill_svaba_14941:HG4_Ill_GATKHC_19145:HG4_Ill_GATKHCSBGrefine_8252:HG3_Ill_svaba_15056:HG2_Ill_svaba_14895:HG4_PB_pbsv_11989:HG3_PB_pbsv_11690:HG2_PB_pbsv_12016:HG4_PB_SVrefine2PBcRDovetail_6019:HG4_Ill_SVrefine2DISCOVARDovetail_8508:HG3_PB_SVrefine2PBcRDovetail_5610:HG3_Ill_SVrefine2DISCOVARDovetail_8730:HG2_PB_SVrefine2PBcRplusDovetail_1611:HG2_PB_SVrefine2PB10Xhap12_8665:HG2_PB_SVrefine2Falcon2Bionano_5817:HG2_Ill_SVrefine2DISCOVARplusDovetail_1867;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_14999:HG2_Ill_250bpfermikitraw_15920:HG2_Ill_GATKHCSBGrefine_8049:HG2_Ill_GATKHC_19164:HG2_Ill_Krunchall_16255:HG2_Ill_manta_3341:HG2_Ill_svaba_14896:HG3_Ill_150bpfermikitraw_15015:HG3_Ill_250bpfermikitraw_15485:HG3_Ill_GATKHCSBGrefine_7929:HG3_Ill_GATKHC_19039:HG3_Ill_Krunchall_15939:HG3_Ill_svaba_15057:HG4_Ill_250bpfermikitraw_15778:HG4_Ill_GATKHC_19146:HG4_Ill_Krunchall_16512:HG4_Ill_MetaSV_760:HG4_Ill_svaba_14942:HG4_PB_SVrefine2Falcon1Dovetail_7303;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0168067;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.169492;PBcalls=14;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-118;DistBack=7058;DistForward=-60;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=177;REFWIDENED=11:1971776-1972070;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:1/1:0:14:0:7:./.:0:3:0:4:1/1:0:42:./.:.:.:.:.:.
chr11	2877730	HG2_Ill_Krunchall_16274	GTATTGTGTGTTCCCAAATGTCCCACAGCCGTAGGCTGGACAAAGCAGGGCCATTCACCTCCACAAAACCTTCC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_15016:HG3_Ill_GATKHC_19059:HG3_Ill_GATKHCSBGrefine_7938:HG2_Ill_GATKHC_19184:HG2_Ill_GATKHCSBGrefine_8059:HG2_Ill_SpiralSDKrefine_2406:HG3_Ill_manta_2726:HG3_Ill_Spiral_12456:HG2_PB_assemblyticsPBcR_3695:HG3_PB_pbsv_11701:HG2_PB_pbsv_12028:HG2_PB_HySA_21763:HG3_PB_HySA_18034:HG3_Ill_svaba_15077:HG3_Ill_scalpel_11474:HG3_Ill_Krunchall_15957:HG3_Ill_250bpfermikitraw_15500:HG3_Ill_150bpfermikitraw_15032:HG2_Ill_svaba_14918:HG2_Ill_Krunchall_16274:HG2_Ill_250bpfermikitraw_15938;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15016:HG3_PB_HySA_18034:HG3_Ill_svaba_15077:HG3_Ill_scalpel_11474:HG3_Ill_Krunchall_15957:HG3_Ill_250bpfermikitraw_15500:HG3_Ill_150bpfermikitraw_15032:HG2_Ill_svaba_14918:HG2_Ill_Krunchall_16274:HG2_Ill_250bpfermikitraw_15938;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.0699301;PBcalls=5;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-73;DistBack=2244;DistForward=7388;DistMin=2244;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=71;REFWIDENED=11:2877718-2877861;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:27:0:0:27:./.:0:3:13:0:0/1:24:16:./.:.:.:.:.:.
chr11	2944491	HG2_Ill_SVrefine2DISCOVARplusDovetail_1879	AGCAGCAGATCCAGAAAGCTCAGGGCACACATCTGACACTCCATCCACCTGCCTGTCTGGGAG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1879:HG3_PB_assemblyticsfalcon_3803:HG4_PB_pbsv_12002:HG3_PB_pbsv_11703:HG4_Ill_250bpfermikitraw_15799:HG3_Ill_250bpfermikitraw_15505:HG2_Ill_250bpfermikitraw_15941:HG2_PB_pbsv_12029:HG4_PB_SVrefine2PBcRDovetail_6028:HG4_Ill_SVrefine2DISCOVARDovetail_8521:HG3_Ill_SVrefine2DISCOVARDovetail_8738:HG2_PB_SVrefine2PBcRplusDovetail_1617:HG2_PB_SVrefine2PB10Xhap12_8677:HG2_PB_SVrefine2Falcon1plusDovetail_1709;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1879:HG4_PB_SVrefine2PBcRDovetail_6028:HG4_Ill_SVrefine2DISCOVARDovetail_8521:HG3_Ill_SVrefine2DISCOVARDovetail_8738:HG2_PB_SVrefine2PBcRplusDovetail_1617:HG2_PB_SVrefine2PB10Xhap12_8677:HG2_PB_SVrefine2Falcon1plusDovetail_1709;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.0833333;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=0;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=191;REFWIDENED=11:2944492-2944744;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.9839;PctRecOverlap=0.7302;SizeDiff=1;StartDistance=-17;EndDistance=-16;GTMatch=0;TruScore=90;MatchId=543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:40:1/1:1:18:0:16:0/0:8:0:5:1:0/1:20:3:./.:.:.:.:.:.
chr11	5829515	HG2_PB_SVrefine2PB10Xhap12_8687	GCATGAGACTTAGGGGACTATCAGGTGGTATATCTTTGTTACTATTCATATCCTTTTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8430:HG2_PB_HySA_21815:HG2_PB_pbsv_12052:HG3_PB_pbsv_11732:HG3_PB_HySA_18077:HG3_PB_SVrefine2PBcRDovetail_5632:HG3_PB_HySA_18076:HG3_Ill_svaba_15116:HG3_Ill_scalpel_11504:HG3_Ill_manta_2731:HG3_Ill_SVrefine2DISCOVARDovetail_8754:HG3_Ill_Krunchall_15996:HG3_Ill_GATKHC_19095:HG3_Ill_GATKHCSBGrefine_7954:HG3_Ill_250bpfermikitraw_15535:HG3_Ill_150bpfermikitraw_15059:HG2_PB_SVrefine2PBcRplusDovetail_1630:HG2_PB_SVrefine2PB10Xhap12_8687:HG2_PB_SVrefine2Falcon2Bionano_5834:HG2_PB_SVrefine2Falcon1plusDovetail_1722:HG2_Ill_svaba_14952:HG2_Ill_manta_3348:HG2_Ill_SpiralSDKrefine_2423:HG2_Ill_Krunchall_16305:HG2_Ill_GATKHC_19213:HG2_Ill_GATKHCSBGrefine_8070:HG2_Ill_250bpfermikitraw_15971:HG2_Ill_150bpfermikitraw_15042;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8430:HG3_PB_SVrefine2PBcRDovetail_5632:HG3_PB_HySA_18076:HG3_Ill_svaba_15116:HG3_Ill_scalpel_11504:HG3_Ill_manta_2731:HG3_Ill_SVrefine2DISCOVARDovetail_8754:HG3_Ill_Krunchall_15996:HG3_Ill_GATKHC_19095:HG3_Ill_GATKHCSBGrefine_7954:HG3_Ill_250bpfermikitraw_15535:HG3_Ill_150bpfermikitraw_15059:HG2_PB_SVrefine2PBcRplusDovetail_1630:HG2_PB_SVrefine2PB10Xhap12_8687:HG2_PB_SVrefine2Falcon2Bionano_5834:HG2_PB_SVrefine2Falcon1plusDovetail_1722:HG2_Ill_svaba_14952:HG2_Ill_manta_3348:HG2_Ill_SpiralSDKrefine_2423:HG2_Ill_Krunchall_16305:HG2_Ill_GATKHC_19213:HG2_Ill_GATKHCSBGrefine_8070:HG2_Ill_250bpfermikitraw_15971:HG2_Ill_150bpfermikitraw_15042;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0521739;PBcalls=10;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=13820;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=59;REFWIDENED=11:5829516-5829631;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:35:0|1:25:0:5:41:0|1:17:0:0:13:0/1:32:26:./.:.:.:.:.:.
chr11	6573044	HG2_PB_SVrefine2Falcon2Bionano_5837	ACCTGTAATCACAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCAGGGAGGTGGAAGTTGCGGTGAGCTGAGATTTGCACCACTGCACTCCAGCCTGGTGACAGAGCGAGACTCCGTCTCCAAAAAAAAAAAGGGGAGCCAGGCATGGTGGCATGCACCTGTAATCCCAGCTACTAGGGAGGGAGGCTTAGGCAGGAGGATTTCTTAAGGCCAGGAGTTCAAGACCAGCCTGGGCAGCATAGTGGGACCCTCATTTAAAAAAAAAAGTTTTAAAAAATGGATAATAAGGGAAAATTATGAAAAACTTTATGCTAATAAATTTAGCAACTTAGGTGAAATGGATACATGCTGTATTAGTCTGTTTTCACACTGCAATAAAGAACTACTTGAGACTGGGTAATTCATAAAGAAAAGAGGGTTAGGCCAGGCATGGTGGCTCACG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8433:HG4_Ill_Krunchall_16560:HG2_PB_pbsv_12056:HG2_PB_assemblyticsfalcon_3854:HG4_PB_HySA_17428:HG4_PB_pbsv_12026:HG4_Ill_MetaSV_773:HG2_Ill_tnscope_1332:HG2_Ill_MetaSV_740:HG4_Ill_GATKHCSBGrefine_8275:HG4_10X_allpass_2268:HG2_Ill_breakscan11_1740:HG2_Ill_GATKHCSBGrefine_8073:HG2_10X_allpass_1932:HG4_PB_SVrefine2PBcRDovetail_6038:HG4_PB_SVrefine2Falcon1Dovetail_7325:HG3_PB_SVrefine2Falcon1Dovetail_7296:HG2_PB_SVrefine2PB10Xhap12_8690:HG2_PB_SVrefine2Falcon2Bionano_5837:HG2_PB_SVrefine2Falcon1plusDovetail_1725:HG2_Ill_SVrefine2DISCOVARplusDovetail_1896;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8433:HG4_PB_SVrefine2PBcRDovetail_6038:HG4_PB_SVrefine2Falcon1Dovetail_7325:HG3_PB_SVrefine2Falcon1Dovetail_7296:HG2_PB_SVrefine2PB10Xhap12_8690:HG2_PB_SVrefine2Falcon2Bionano_5837:HG2_PB_SVrefine2Falcon1plusDovetail_1725:HG2_Ill_SVrefine2DISCOVARplusDovetail_1896;NumExactMatchSVs=8;ClusterMaxShiftDist=0.159722;ClusterMaxSizeDiff=0.159722;ClusterMaxEditDist=0.159722;PBcalls=10;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-448;DistBack=81966;DistForward=27313;DistMin=27313;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=35;REFWIDENED=11:6573045-6573527;PctSeqSimilarity=0.9714;PctSizeSimilarity=1;PctRecOverlap=0.9577;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=97;MatchId=545.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:27:0|1:28:1:1:21:./.:3:22:43:0:0/1:72:12:0/1:38:9:.:.:.
chr11	7134664	HG2_10X_SVrefine210Xhap12_8436	TATATGAAATAATACGAAAAGAACAAAAGGAAAGCTCATTCTACCAGACTTTAAGACCGATTACATAGCCAAGTAAGGTGAGAATGACAAAAGTACAATGGAACAGAGTACAAAGCCCAGAAATAGATTATAGATTTGTGTGTATTTAACTTCTTATATAATACAAGTAGCAGTGAGGGAAATAATTGTTCAATAGATTTTGTTGGGGAAACTGGCTTGTTCTATTGTGAAAAACAGAATTAGATCACTATCTTATATCATAAGCAAAGGTAAATTTAAGACCATGTAAGTTGAAGACCAATAGGTAAATAGTTAAATTATGAAATTAGTTGACAAGGGATTAATATCTGTAATATATGTACAATTCTATATAAATCAAAGTAAATAGAAAGAAATGGGCAAAGGAGAGCTATTTACAGAAAGGAAACACTGAATGGATAACAAGTATATGACGAGATGCTTAGTTTCACTTGTAAATAGAGAAATACAAATGAAAACCATGAAATACCAACTCGTACTAACAAAAATTAGAAGGTTAAATGTGGTAAACAAGAACCTTCATGCTCTGCTGGTGGGAATATAAACTAGTACGGTTATTCTGGAGAGAAATCTGGCAGCATATGGGGAAATTAAAAGGGTGTATAGGCTGGGCGTGGTGGCTCATGCCTGAAATCTCAACACTTCCAGAGGCTGAGACAGGCGGATCGCCTGAGCCCAGGAGTTTGAGTCCAGCCTGGGTAACATGGCGAAACCCTGTCTCTACTAAAAAGAAAAGGAATAGCCAGGTGTAGTGTTGTGCACCTGTAGGCTCAGCTACCAGGGAGGCTGAAGTGGGAGAATTGCTTGAGCCTCAGAGGTTGAGGCTGCAGTGAGCTGTGATCACACCACTGCACTCCACCCTGAGTGCGAGAGTAAGACCCCCCTCTCTCTAAAAAAAAGGTGTATATTCTATAATCCAGCAACCCTGATCTTGGAACTTAACTGAAGAGACTCTCCCATGGGTTTAATGAAGAGAAATGTAAAAGAATACATGTCACTGCATTTTGGGTGGGGGACATTAAATTGTAAGCCCATTGTCATACCTTAAAACTAGTCATTGCATTTTAATGCAATCCCTCCATTACCTCTACTCCTACTTTTTGCTCTCAAACAAGAAGCTACCACCTTATGCTTCATCTTTTAGGCACCATCTTTATTGCAACCAGGAATCCATTTAAACCTACCATTTTTCATAAAACCTTCCTTTCTTCATGTCTTCACTTCTTTCCTACCCAGGTTACATTTTATGGTTCAACTTAATCACTTCATTAACTCCTTTGTCTCTCTCTTGCTCTGATATTTTCACCTGGCAAAACCCCAACCCTGTTAGATCTAACTCTCCACACTTCACAACTATACCAAGGGAGATAAATATGGTTAGGGAAATTTTCAAAACACTGCTGTCTGGTATCACTTTAAATTTATGGTCATATATATCAAGTAGATTCTTAGTGCTGCCAGCAAACAATGTGTTGCCAAATCTGTTCATCCTCCTACTTTTCAGAATCAATGAATGTGTTATACACAGAGCAATATGGGAAGATAATTAAAACAATGTTGATTGAAAAATAAGAGAGTGAAATCTACAATAAAATATCCTTTAGGTAAATTTAAAATGCATATTGCAAAACAACACTAAAGTATATATAAAATGTTCCCATTTTTCATGAATACATACATGTTTAAGACCTTATGGAATGCATTTAACTGGGTGCCCATGAAGGGAAATGGAATACAAACC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8436:HG2_10X_allpass_1935:HG4_Ill_Krunchall_16566:HG3_Ill_Krunchall_16005:HG2_Ill_Krunchall_16312:HG2_PB_assemblyticsfalcon_3861:HG2_PB_assemblyticsPBcR_3738:HG3_PB_assemblyticsfalcon_3851:HG4_PB_pbsv_12029:HG3_PB_pbsv_11738:HG2_PB_pbsv_12059:HG3_Ill_MetaSV_737:HG4_Ill_MetaSV_774:HG4_10X_allpass_2270:HG3_Ill_GATKHCSBGrefine_7959:HG3_10X_allpass_2353:HG2_Ill_SpiralSDKrefine_2429:HG2_Ill_MetaSV_741:HG2_Ill_GATKHCSBGrefine_8074:HG3_PB_SVrefine2PBcRDovetail_5636:HG3_PB_SVrefine2Falcon1Dovetail_7299:HG2_PB_SVrefine2PBcRplusDovetail_1637:HG2_PB_SVrefine2PB10Xhap12_8693:HG2_PB_SVrefine2Falcon2Bionano_5839:HG2_PB_SVrefine2Falcon1plusDovetail_1728:HG2_Ill_SVrefine2DISCOVARplusDovetail_1897;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8436:HG3_PB_SVrefine2PBcRDovetail_5636:HG3_PB_SVrefine2Falcon1Dovetail_7299:HG2_PB_SVrefine2PBcRplusDovetail_1637:HG2_PB_SVrefine2PB10Xhap12_8693:HG2_PB_SVrefine2Falcon2Bionano_5839:HG2_PB_SVrefine2Falcon1plusDovetail_1728:HG2_Ill_SVrefine2DISCOVARplusDovetail_1897;NumExactMatchSVs=8;ClusterMaxShiftDist=0.198546;ClusterMaxSizeDiff=0.198546;ClusterMaxEditDist=0.198546;PBcalls=12;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-1779;DistBack=41864;DistForward=3247;DistMin=3247;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=114;REFWIDENED=11:7134665-7136557;PctSeqSimilarity=0.9837;PctSizeSimilarity=1;PctRecOverlap=0.9764;SizeDiff=0;StartDistance=-42;EndDistance=-42;GTMatch=0;TruScore=98;MatchId=546.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:./.:0:0:0:0:./.:2:0:0:5:0/1:13:35:./.:8:108:1950:.:.
chr11	7209295	HG2_Ill_SVrefine2DISCOVARplusDovetail_1898	TGTTAATTTAATTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8437:HG2_PB_assemblyticsfalcon_3862:HG2_PB_assemblyticsPBcR_3739:HG4_PB_assemblyticsfalcon_3771:HG4_Ill_Krunchall_16568:HG3_Ill_Krunchall_16006:HG2_Ill_Krunchall_16313:HG2_PB_HySA_21825:HG4_Ill_MetaSV_775:HG3_Ill_MetaSV_738:HG2_Ill_tnscope_1333:HG2_Ill_MetaSV_742:HG4_PB_pbsv_12031:HG4_PB_SVrefine2PBcRDovetail_6040:HG4_PB_SVrefine2Falcon1Dovetail_7327:HG4_Ill_scalpel_10997:HG4_Ill_GATKHCSBGrefine_8278:HG3_PB_pbsv_11739:HG3_PB_SVrefine2PBcRDovetail_5637:HG3_PB_SVrefine2Falcon1Dovetail_7300:HG3_Ill_scalpel_11511:HG3_Ill_manta_2732:HG3_Ill_GATKHCSBGrefine_7960:HG3_10X_allpass_2354:HG2_PB_pbsv_12060:HG2_PB_SVrefine2PBcRplusDovetail_1638:HG2_PB_SVrefine2PB10Xhap12_8694:HG2_PB_SVrefine2Falcon2Bionano_5840:HG2_PB_SVrefine2Falcon1plusDovetail_1729:HG2_Ill_scalpel_11318:HG2_Ill_manta_3349:HG2_Ill_SVrefine2DISCOVARplusDovetail_1898:HG2_Ill_GATKHCSBGrefine_8075;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8437:HG4_PB_pbsv_12031:HG4_PB_SVrefine2PBcRDovetail_6040:HG4_PB_SVrefine2Falcon1Dovetail_7327:HG4_Ill_scalpel_10997:HG4_Ill_GATKHCSBGrefine_8278:HG3_PB_pbsv_11739:HG3_PB_SVrefine2PBcRDovetail_5637:HG3_PB_SVrefine2Falcon1Dovetail_7300:HG3_Ill_scalpel_11511:HG3_Ill_manta_2732:HG3_Ill_GATKHCSBGrefine_7960:HG3_10X_allpass_2354:HG2_PB_pbsv_12060:HG2_PB_SVrefine2PBcRplusDovetail_1638:HG2_PB_SVrefine2PB10Xhap12_8694:HG2_PB_SVrefine2Falcon2Bionano_5840:HG2_PB_SVrefine2Falcon1plusDovetail_1729:HG2_Ill_scalpel_11318:HG2_Ill_manta_3349:HG2_Ill_SVrefine2DISCOVARplusDovetail_1898:HG2_Ill_GATKHCSBGrefine_8075;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0932476;ClusterMaxSizeDiff=0.0932476;ClusterMaxEditDist=0.0932476;PBcalls=15;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=52696;DistForward=2170;DistMin=2170;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=11:7209296-7209627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=547.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:./.:0:0:1:2:./.:0:0:0:0:1/1:0:51:0/1:2:13:.:.:.
chr11	7453790	HG4_Ill_GATKHCSBGrefine_8280	AAAAAAAAAAAAAAAAAAAAAAAAATATATATACATATATATATATATATATATATATATATATATATATATATAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_12061:HG4_Ill_manta_2844:HG2_PB_HySA_21828:HG3_Ill_manta_2733:HG2_Ill_manta_3350:HG2_CG_vcfBeta_6845:HG2_Ill_SpiralSDKrefine_2431:HG3_CG_vcfBeta_6507:HG4_PB_assemblyticsfalcon_3774:HG3_PB_assemblyticsfalcon_3855:HG4_Ill_svaba_14996:HG4_Ill_Krunchall_16570:HG4_Ill_GATKHC_19208:HG4_Ill_GATKHCSBGrefine_8280:HG4_Ill_250bpfermikitraw_15833:HG4_Ill_150bpfermikitraw_15197:HG4_10X_allpass_2272:HG3_Ill_svaba_15124:HG3_Ill_scalpel_11514:HG3_Ill_Krunchall_16009:HG3_Ill_GATKHC_19106:HG3_Ill_GATKHCSBGrefine_7961:HG3_Ill_250bpfermikitraw_15544:HG3_Ill_150bpfermikitraw_15068:HG3_10X_allpass_2355:HG2_Ill_svaba_14958:HG2_Ill_Krunchall_16315:HG2_Ill_GATKHC_19221:HG2_Ill_GATKHCSBGrefine_8076:HG2_Ill_250bpfermikitraw_15979:HG2_Ill_150bpfermikitraw_15050:HG4_PB_HySA_17438:HG4_PB_pbsv_12033:HG3_PB_pbsv_11741;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15050:HG2_Ill_250bpfermikitraw_15979:HG2_Ill_GATKHCSBGrefine_8076:HG2_Ill_GATKHC_19221:HG2_Ill_Krunchall_16315:HG2_Ill_svaba_14958:HG3_10X_allpass_2355:HG3_Ill_150bpfermikitraw_15068:HG3_Ill_250bpfermikitraw_15544:HG3_Ill_GATKHCSBGrefine_7961:HG3_Ill_GATKHC_19106:HG3_Ill_Krunchall_16009:HG3_Ill_scalpel_11514:HG3_Ill_svaba_15124:HG4_10X_allpass_2272:HG4_Ill_150bpfermikitraw_15197:HG4_Ill_250bpfermikitraw_15833:HG4_Ill_GATKHCSBGrefine_8280:HG4_Ill_GATKHC_19208:HG4_Ill_Krunchall_16570:HG4_Ill_svaba_14996;NumExactMatchSVs=21;ClusterMaxShiftDist=0.169014;ClusterMaxSizeDiff=0.169014;ClusterMaxEditDist=0.255319;PBcalls=7;Illcalls=23;TenXcalls=2;CGcalls=2;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=12;HG4count=11;NumTechs=4;NumTechsExact=2;SVLEN=-75;DistBack=24879;DistForward=54974;DistMin=24879;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:7453789-7453867;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=548.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:29:0|1:36:2:5:26:1|0:1:22:9:0:0/1:10:10:./.:.:.:.:.:.
chr11	7716903	HG3_PB_SVrefine2PBcRDovetail_5639	TAAGAATGGATGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1741:HG3_Ill_GATKHCSBGrefine_7965:HG3_Ill_MetaSV_741:HG4_Ill_Krunchall_16572:HG3_PB_pbsv_11743:HG3_Ill_Krunchall_16011:HG2_PB_pbsv_12062:HG2_Ill_Krunchall_16317:HG4_PB_assemblyticsfalcon_3775:HG3_PB_assemblyticsfalcon_3856:HG2_PB_assemblyticsPBcR_3740:HG2_PB_assemblyticsfalcon_3864:HG4_PB_pbsv_12034:HG4_Ill_MetaSV_777:HG3_Ill_MetaSV_740:HG2_Ill_tnscope_1334:HG2_Ill_MetaSV_743:HG4_PB_SVrefine2PBcRDovetail_6042:HG4_PB_SVrefine2Falcon1Dovetail_7329:HG4_Ill_manta_2845:HG4_Ill_SVrefine2DISCOVARDovetail_8541:HG4_Ill_GATKHCSBGrefine_8281:HG4_10X_allpass_2273:HG3_PB_SVrefine2PBcRDovetail_5639:HG3_PB_SVrefine2Falcon1Dovetail_7303:HG3_Ill_scalpel_11515:HG3_Ill_manta_2734:HG3_Ill_SVrefine2DISCOVARDovetail_8762:HG3_Ill_GATKHCSBGrefine_7963:HG3_10X_allpass_2356:HG2_PB_SVrefine2PBcRplusDovetail_1639:HG2_PB_SVrefine2PB10Xhap12_8695:HG2_PB_SVrefine2Falcon2Bionano_5841:HG2_PB_SVrefine2Falcon1plusDovetail_1730:HG2_Ill_manta_3351:HG2_Ill_SVrefine2DISCOVARplusDovetail_1901:HG2_Ill_GATKHCSBGrefine_8077:HG2_10X_allpass_1937:HG2_10X_SVrefine210Xhap12_8438;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8438:HG2_10X_allpass_1937:HG2_Ill_GATKHCSBGrefine_8077:HG2_Ill_SVrefine2DISCOVARplusDovetail_1901:HG2_Ill_manta_3351:HG2_PB_SVrefine2Falcon1plusDovetail_1730:HG2_PB_SVrefine2Falcon2Bionano_5841:HG2_PB_SVrefine2PB10Xhap12_8695:HG2_PB_SVrefine2PBcRplusDovetail_1639:HG3_10X_allpass_2356:HG3_Ill_GATKHCSBGrefine_7963:HG3_Ill_SVrefine2DISCOVARDovetail_8762:HG3_Ill_manta_2734:HG3_Ill_scalpel_11515:HG3_PB_SVrefine2Falcon1Dovetail_7303:HG3_PB_SVrefine2PBcRDovetail_5639:HG4_10X_allpass_2273:HG4_Ill_GATKHCSBGrefine_8281:HG4_Ill_SVrefine2DISCOVARDovetail_8541:HG4_Ill_manta_2845:HG4_PB_SVrefine2Falcon1Dovetail_7329:HG4_PB_SVrefine2PBcRDovetail_6042;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0949263;ClusterMaxSizeDiff=0.0949263;ClusterMaxEditDist=0.0949263;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=10022;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=11:7716904-7717231;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=549.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:0:22:2:24:1/1:0:19:0:16:1/1:0:47:./.:2:9:.:.:.
chr11	7790210	HG2_PB_SVrefine2PBcRplusDovetail_1640	CAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCCAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCAAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGTTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCTCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGAGGAAAATCACACTCTGGGGACTGTGGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCATACCAGCATGGCACATGTATACGTATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAATAAATAAATAAATAAATAAATAAATAAATAAATAATTAAAAAACATTCCATGCTCACGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAAACTACTTTAAACTTCATATGGAATCAAAAAAGAGCCCACATTGCCAAGACAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACACACAGTACAGTTACCAAAACAGAGATATAGACGAATGGAACAGAACAGAGGCCTCAGAAATAATACCACACACCTACAACCATCTGATCTTTGACAAACCTGATAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCTTATTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTCATATGTTAGACCTAAAACCATAAAAAGTCTAGAAAAGAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAATACCAAAAGCAATGGCAACAAAAGCCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8439:HG2_10X_allpass_1938:HG3_10X_allpass_2357:HG3_PB_HySA_18086:HG4_10X_allpass_2274:HG4_PB_HySA_17439:HG2_PB_pbsv_12063:HG4_Ill_MetaSV_778:HG4_Ill_GATKHCSBGrefine_8282:HG3_Ill_MetaSV_742:HG3_Ill_GATKHCSBGrefine_7967:HG2_Ill_MetaSV_744:HG2_Ill_GATKHCSBGrefine_8078:HG4_PB_pbsv_12035:HG4_PB_SVrefine2PBcRDovetail_6043:HG4_PB_SVrefine2Falcon1Dovetail_7330:HG3_PB_pbsv_11744:HG3_PB_SVrefine2Falcon1Dovetail_7304:HG2_PB_SVrefine2PBcRplusDovetail_1640:HG2_PB_SVrefine2PB10Xhap12_8696:HG2_PB_SVrefine2Falcon2Bionano_5842:HG2_PB_SVrefine2Falcon1plusDovetail_1731:HG2_Ill_SVrefine2DISCOVARplusDovetail_1902;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8439:HG4_PB_SVrefine2PBcRDovetail_6043:HG4_PB_SVrefine2Falcon1Dovetail_7330:HG3_PB_pbsv_11744:HG3_PB_SVrefine2Falcon1Dovetail_7304:HG2_PB_SVrefine2PBcRplusDovetail_1640:HG2_PB_SVrefine2PB10Xhap12_8696:HG2_PB_SVrefine2Falcon2Bionano_5842:HG2_PB_SVrefine2Falcon1plusDovetail_1731:HG2_Ill_SVrefine2DISCOVARplusDovetail_1902;NumExactMatchSVs=10;ClusterMaxShiftDist=0.075495;ClusterMaxSizeDiff=0.075495;ClusterMaxEditDist=0.075495;PBcalls=12;Illcalls=7;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1676;DistBack=6898;DistForward=-657;DistMin=-657;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1023;REFWIDENED=11:7790211-7792909;PctSeqSimilarity=0.9679;PctSizeSimilarity=0.9994;PctRecOverlap=0.9261;SizeDiff=1;StartDistance=-124;EndDistance=-123;GTMatch=0;TruScore=96;MatchId=550.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:7:62:1/1:2:8:2:8:./.:10:7:14:7:0/1:22:31:0/1:16:95:1759:.:.
chr11	8326057	HG4_Ill_scalpel_11007	TAAGAATTGGTCGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8443:HG4_PB_assemblyticsfalcon_3785:HG2_PB_assemblyticsPBcR_3748:HG4_PB_pbsv_12038:HG4_PB_SVrefine2PBcRDovetail_6045:HG4_PB_SVrefine2Falcon1Dovetail_7332:HG4_Ill_svaba_15002:HG4_Ill_scalpel_11007:HG4_Ill_manta_2846:HG4_Ill_SVrefine2DISCOVARDovetail_8543:HG4_Ill_GATKHCSBGrefine_8284:HG4_10X_allpass_2275:HG2_PB_pbsv_12066:HG2_PB_SVrefine2PBcRplusDovetail_1643:HG2_PB_SVrefine2PB10Xhap12_8699:HG2_PB_SVrefine2Falcon2Bionano_5845:HG2_PB_HySA_21833:HG2_Ill_svaba_14965:HG2_Ill_manta_3352:HG2_Ill_SpiralSDKrefine_2438:HG2_Ill_SVrefine2DISCOVARplusDovetail_1904:HG2_Ill_GATKHCSBGrefine_8080:HG2_10X_allpass_1939;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8443:HG4_PB_SVrefine2PBcRDovetail_6045:HG4_PB_SVrefine2Falcon1Dovetail_7332:HG4_Ill_svaba_15002:HG4_Ill_scalpel_11007:HG4_Ill_manta_2846:HG4_Ill_SVrefine2DISCOVARDovetail_8543:HG4_Ill_GATKHCSBGrefine_8284:HG4_10X_allpass_2275:HG2_PB_pbsv_12066:HG2_PB_SVrefine2PBcRplusDovetail_1643:HG2_PB_SVrefine2PB10Xhap12_8699:HG2_PB_SVrefine2Falcon2Bionano_5845:HG2_PB_HySA_21833:HG2_Ill_svaba_14965:HG2_Ill_manta_3352:HG2_Ill_SpiralSDKrefine_2438:HG2_Ill_SVrefine2DISCOVARplusDovetail_1904:HG2_Ill_GATKHCSBGrefine_8080:HG2_10X_allpass_1939;NumExactMatchSVs=20;ClusterMaxShiftDist=0.149254;ClusterMaxSizeDiff=0.149254;ClusterMaxEditDist=0.149254;PBcalls=10;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-138;DistBack=-34;DistForward=-128;DistMin=-128;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=11:8326058-8326206;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=551.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:35:0|1:32:4:6:29:0|1:28:1:0:29:0/1:14:13:./.:.:.:.:.:.
chr11	8932107	HG2_PB_SVrefine2Falcon1plusDovetail_1737	CTGTGTGTGTGTGTGGACACGGGTTGTCGCTATGTTGCCTACCTAGCTGGTACCCCATAACCACTCCTGGCTAGTGTG	C	20	PASS	ClusterIDs=HG2_PB_pbsv_12073:HG2_Ill_SpiralSDKrefine_2444:HG4_PB_assemblyticsfalcon_3791:HG2_PB_assemblyticsfalcon_3882:HG3_PB_pbsv_11752:HG4_PB_pbsv_12043:HG4_PB_HySA_17453:HG4_PB_SVrefine2PBcRDovetail_6050:HG4_Ill_SVrefine2DISCOVARDovetail_8546:HG4_Ill_GATKHCSBGrefine_8287:HG4_Ill_250bpfermikitraw_15849:HG4_Ill_150bpfermikitraw_15214:HG3_PB_SVrefine2Falcon1Dovetail_7311:HG3_Ill_250bpfermikitraw_15562:HG2_PB_SVrefine2PBcRplusDovetail_1647:HG2_PB_SVrefine2Falcon2Bionano_5849:HG2_PB_SVrefine2Falcon1plusDovetail_1737:HG2_Ill_SVrefine2DISCOVARplusDovetail_1906:HG2_Ill_250bpfermikitraw_15997;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15997:HG2_Ill_SVrefine2DISCOVARplusDovetail_1906:HG2_PB_SVrefine2Falcon1plusDovetail_1737:HG2_PB_SVrefine2Falcon2Bionano_5849:HG2_PB_SVrefine2PBcRplusDovetail_1647:HG3_Ill_250bpfermikitraw_15562:HG3_PB_SVrefine2Falcon1Dovetail_7311:HG4_Ill_150bpfermikitraw_15214:HG4_Ill_250bpfermikitraw_15849:HG4_Ill_GATKHCSBGrefine_8287:HG4_Ill_SVrefine2DISCOVARDovetail_8546:HG4_PB_SVrefine2PBcRDovetail_6050;NumExactMatchSVs=12;ClusterMaxShiftDist=0.227848;ClusterMaxSizeDiff=0.227848;ClusterMaxEditDist=0.240506;PBcalls=11;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-77;DistBack=6670;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=146;REFWIDENED=11:8932108-8932330;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:./.:14:16:13:9:0|1:12:1:0:6:0/1:3:13:./.:.:.:.:.:.
chr11	9062053	HG3_Ill_GATKHCSBGrefine_7971	CAGGAGAAAGGGAGGATTCATATCCCAGGCAGGATGGGGAGGGTACACAGCATGGGTACGT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8702:HG3_PB_assemblyticsfalcon_3875:HG3_PB_pbsv_11755:HG4_PB_pbsv_12045:HG4_PB_assemblyticsfalcon_3794:HG4_Ill_250bpfermikitraw_15850:HG3_Ill_GATKHCSBGrefine_7971:HG2_Ill_SpiralSDKrefine_2445:HG2_Ill_GATKHCSBGrefine_8082:HG2_Ill_250bpfermikitraw_15998:HG2_PB_pbsv_12075:HG4_Ill_SVrefine2DISCOVARDovetail_8547:HG2_PB_SVrefine2PBcRplusDovetail_1648;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15998:HG2_Ill_GATKHCSBGrefine_8082:HG2_Ill_SpiralSDKrefine_2445:HG3_Ill_GATKHCSBGrefine_7971:HG4_Ill_250bpfermikitraw_15850:HG4_PB_assemblyticsfalcon_3794;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0495868;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.116667;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=-216;DistForward=53750;DistMin=-216;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=302;REFWIDENED=11:9061968-9062329;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=554.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:27:1:1:27:./.:0:2:13:1:0/1:10:14:./.:.:.:.:.:.
chr11	9323570	HG2_10X_SVrefine210Xhap12_8446	TTGAGACGGAGTCCTGCTCAGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTAGAACTACAGACACCTGCCACGATGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGGGATGGGGTTTCACCATGTTAGCCAGGATGGTCTTATCTCCTGATCTTGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATAGCGCCCGGCATTATTTTTCTCTTGTTTTAACAATCTTCCTTTTTTCCTAGTTTAAACTGATGTCTATTCCTTTCAACCAAAAAGTCTTGACTAAATAAAAGATGAGCTTCATTTTTATCCCTTGTCTCACTACAACAATTGGCATTAGTAAGATTTTGCTGATTTTTTTACCCCCGCAAGAGACAGGGTCTCCCTATGTTGCCGAGGCTGGACTTGAACTCCTGGGCTCCAGCAATCCTCCTACTTCAGCCCCTCAAGTAGCTGGCACTACAGGCATGTAACACTGAGCCCTGACTAGATATTACTAAATTCTATGTTGAACACATAGAGAAATAGAAACCAACTAGCTCCTTGCTATTCAAAGAATGTTTGGTAGACTATATGAATCAGCATTATCAGGAAGCTTGCTGGAAATTCAGATTCCCACTGAAGCAAAAATCTGCATTTTAATGATACTCGTGATCTTCATGCACATTAAAGTTTGAAAAGCTAAAATCTGGCCCACTTTTACAAGTAAGAGGCCCAAAGAAGAAGGGTATACTATTTTTTAAAAAAAAATCCTGAGCCAGAGTGGTGGTGGTGTACACCTATAGTCCCAACTACTCAAGAAACTCAGTCAGGAGGATCACTTAAGCACAGAACTTTGATTCCGGCCTGGGCAACACAGTGAGACCCTATCTCTAAAAGGAACCAAATAATGTGAAGTGTATTTCCAAAGCATTTTGTTGTTGTTGTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8446:HG4_10X_allpass_2276:HG2_10X_allpass_1940:HG4_PB_HySA_17455:HG4_PB_pbsv_12046:HG4_Ill_GATKHCSBGrefine_8291:HG3_Ill_MetaSV_746:HG2_Ill_MetaSV_746:HG2_Ill_GATKHCSBGrefine_8083:HG2_PB_pbsv_12076:HG2_PB_HySA_21840:HG3_10X_allpass_2360:HG4_Ill_MetaSV_781:HG2_Ill_tnscope_1335:HG3_PB_pbsv_11756:HG4_PB_SVrefine2PBcRDovetail_6052:HG4_Ill_SVrefine2DISCOVARDovetail_8548:HG3_PB_SVrefine2Falcon1Dovetail_7313:HG3_Ill_SVrefine2DISCOVARDovetail_8765:HG2_PB_SVrefine2PBcRplusDovetail_1649:HG2_PB_SVrefine2PB10Xhap12_8703:HG2_PB_SVrefine2Falcon2Bionano_5851:HG2_PB_SVrefine2Falcon1plusDovetail_1738:HG2_Ill_SVrefine2DISCOVARplusDovetail_1907;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8446:HG4_PB_SVrefine2PBcRDovetail_6052:HG4_Ill_SVrefine2DISCOVARDovetail_8548:HG3_PB_SVrefine2Falcon1Dovetail_7313:HG3_Ill_SVrefine2DISCOVARDovetail_8765:HG2_PB_SVrefine2PBcRplusDovetail_1649:HG2_PB_SVrefine2PB10Xhap12_8703:HG2_PB_SVrefine2Falcon2Bionano_5851:HG2_PB_SVrefine2Falcon1plusDovetail_1738:HG2_Ill_SVrefine2DISCOVARplusDovetail_1907;NumExactMatchSVs=10;ClusterMaxShiftDist=0.160396;ClusterMaxSizeDiff=0.160396;ClusterMaxEditDist=0.160396;PBcalls=11;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1010;DistBack=102963;DistForward=-807;DistMin=-807;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=203;REFWIDENED=11:9323571-9324783;PctSeqSimilarity=0.9366;PctSizeSimilarity=1;PctRecOverlap=0.9308;SizeDiff=0;StartDistance=-70;EndDistance=-70;GTMatch=0;TruScore=95;MatchId=555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:37:./.:3:6:0:14:./.:7:9:12:8:0/1:3:11:0/1:9:46:.:.:.
chr11	9525786	HG2_Ill_MetaSV_747	TTGAGCCACCACACCTGGCCAAAGCATCTTTTTATGTATTTATTAGCCATGTGTATATCTTCTTTGGAGAAATGTCTATTCAAATCCTTTGCCCGTTTTTAAAATTGGGTTGTGTCTTTATTACTGAGTTGTATAACTTTAATTCGAGAGACTTGAATCCAAGTCTCTTATTAGATATATTAGTTACAGATATTTTCTTCCATTCTGTGGCTGGTTTTTTAATTCTCTTAATGATATTTGCAGTATAGAAGCTTTTAATTTTAATGCTCCATTTTGTGGATGTATTTTTGGTGGGTGAGAATGGAAAGGCAAATGTGAGCGTAAGGCAGGATATGCATTAGTTTTATAAGAAAAATTTTAATATATTGTTTTATTACTGGTATTAAGAGTAAACTTGTGTTAATTCAAAATTAAAAGACATTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTGAGACAGCGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACCTGCCACCACGCCCAGCTAATTTTTATACTTTTAATAGAGACGGGATTTCACCATGTTGGCCATGACAGTCTCAATCTCTTGACCTTGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCCAGCCTCTTTTTTTTTTTTTTTTTAAGATGGAGTCACGCCCTGTCACCCAGGCTGGAGTGCAATGGCACGATCTAGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCATACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCCATCTCCTGACGTTGTGATCCACCCACCTTGGCCTCCCAAAGTGCTAGGATTACAGGCG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_1740:HG2_PB_pbsv_12079:HG4_10X_allpass_2278:HG2_PB_HySA_21845:HG3_10X_allpass_2363:HG2_10X_allpass_1942:HG4_PB_HySA_17459:HG4_PB_pbsv_12049:HG3_PB_pbsv_11759:HG3_Ill_Krunchall_16034:HG3_PB_HySA_18099:HG4_Ill_MetaSV_783:HG4_Ill_GATKHCSBGrefine_8295:HG3_Ill_GATKHCSBGrefine_7974:HG2_Ill_breakscan11_1742:HG2_Ill_SpiralSDKrefine_2448:HG2_Ill_MetaSV_747:HG2_Ill_GATKHCSBGrefine_8086:HG3_Ill_MetaSV_747:HG3_PB_SVrefine2Falcon1Dovetail_7315:HG4_PB_SVrefine2Falcon1Dovetail_7337:HG3_PB_SVrefine2PBcRDovetail_5646:HG4_PB_SVrefine2PBcRDovetail_6054:HG4_Ill_SVrefine2DISCOVARDovetail_8551:HG3_Ill_SVrefine2DISCOVARDovetail_8767:HG2_PB_SVrefine2PBcRplusDovetail_1651:HG2_PB_SVrefine2PB10Xhap12_8706:HG2_PB_SVrefine2Falcon2Bionano_5852;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8086:HG2_Ill_MetaSV_747:HG2_Ill_SpiralSDKrefine_2448:HG2_Ill_breakscan11_1742:HG3_Ill_GATKHCSBGrefine_7974:HG4_Ill_GATKHCSBGrefine_8295:HG4_Ill_MetaSV_783;NumExactMatchSVs=7;ClusterMaxShiftDist=0.228319;ClusterMaxSizeDiff=0.228319;ClusterMaxEditDist=0.228319;PBcalls=14;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=-1013;DistBack=17784;DistForward=-1010;DistMin=-1010;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=267;REFWIDENED=11:9525542-9526821;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=556.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:25:./.:14:5:1:26:1|0:0:30:56:0:0/1:39:18:0/1:73:38:1100:.:.
chr11	9794573	HG2_Ill_GATKHCSBGrefine_8088	TAAAGAAATACCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_748:HG4_PB_SVrefine2PBcRDovetail_6055:HG2_PB_HySA_21851:HG4_Ill_Krunchall_16600:HG2_PB_pbsv_12083:HG3_PB_pbsv_11761:HG4_Ill_MetaSV_784:HG2_Ill_tnscope_1336:HG2_Ill_MetaSV_748:HG4_PB_SVrefine2Falcon1Dovetail_7338:HG4_Ill_SVrefine2DISCOVARDovetail_8553:HG4_Ill_GATKHCSBGrefine_8298:HG4_10X_allpass_2279:HG3_PB_SVrefine2PBcRDovetail_5647:HG3_Ill_SVrefine2DISCOVARDovetail_8770:HG3_Ill_GATKHCSBGrefine_7976:HG2_PB_SVrefine2PBcRplusDovetail_1653:HG2_PB_SVrefine2Falcon2Bionano_5853:HG2_PB_SVrefine2Falcon1plusDovetail_1742:HG2_Ill_SVrefine2DISCOVARplusDovetail_1909:HG2_Ill_GATKHCSBGrefine_8088:HG2_10X_allpass_1944:HG2_10X_SVrefine210Xhap12_8450:HG4_PB_pbsv_12053:HG2_Ill_breakscan11_1743;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8450:HG2_10X_allpass_1944:HG2_Ill_GATKHCSBGrefine_8088:HG2_Ill_SVrefine2DISCOVARplusDovetail_1909:HG2_PB_SVrefine2Falcon1plusDovetail_1742:HG2_PB_SVrefine2Falcon2Bionano_5853:HG2_PB_SVrefine2PBcRplusDovetail_1653:HG3_Ill_GATKHCSBGrefine_7976:HG3_Ill_SVrefine2DISCOVARDovetail_8770:HG3_PB_SVrefine2PBcRDovetail_5647:HG4_10X_allpass_2279:HG4_Ill_GATKHCSBGrefine_8298:HG4_Ill_SVrefine2DISCOVARDovetail_8553:HG4_PB_SVrefine2Falcon1Dovetail_7338;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0935673;ClusterMaxSizeDiff=0.0935673;ClusterMaxEditDist=0.125;PBcalls=10;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=21305;DistForward=-254;DistMin=-254;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=75;REFWIDENED=11:9794574-9794974;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=557.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:27:0|1:32:1:0:26:0|1:27:0:0:18:0/1:24:18:0/1:31:7:.:.:.
chr11	10260047	HG3_Ill_SVrefine2DISCOVARDovetail_8772	ACTTCATATTGAAAAAAGCTTGAATTCCACAAGAAGATTAACATTTTCTTATGTACCTAATGGTATAACCTTGAAAGATATGAAGCAAAATTGAGAGACACAAAGAGAAAAAGACAAATCCAAAATAACATGGCTGGGCGCAGTGGTTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTAGCCAACATGGTGAAACTCTGTCTCTACAAAAAATACAAAAATTAGCCAGGTGTGCTGGCACACACCTGTAATCACAGCTACACAGGAGGCTGAGGCAAAAGAATCACTTGAACCTGGGAGGCAGAGGTTGCGGTGAGCCGAGATTGCCCCACTGCACTCTAGCTTGGGCAAAAGAGTGTGACTTCATCTCAAAAAACAAACAAAAAATAAATAAGTAAAATAATAGTGGACGATGTTAACGTAACTCTTGCAGCAACTGATGAGAACATGTGAACAAACAAAACAGGAATACAGAAGTAACAAAACTGACCTGAATTATACATATATACACACATATATGTTTATGTGTATATACATGTATAATATATGTATATTAACATAAACGTGTGTATATGTGTGTATATGTATATCTGCATGTATGTGAATATATATAAACCACTGCACAAACTACAGAATAAAATCCTTTTCAAGCTCATACAAAATTTTTACCAAAATTCAATTTGTTTGCAACATAAAGCAAGTTTCAGCAGATTTAAAAGGACTGAAATCATACACAGCTTCTTCCCTAACCAACTGCAATTAACCTAAAACCAATAAGACTAAGATAAATAGAAAATTGCCATATACTTGGAAATTTTAAAATATGCTCCTAAATAATCCATGGGTTAAAAACTAAATTTCAATAAAAACTGGAAAATATGTTAAACAAAATGATTAAAAATACAATATCAAAACTTGTGAGATGCTTCCTTAGCATTCATATTTTGGTGCCTAATACTCTACTAGTAAGTGAACCACAATATAATGGAGTAGGAGAAAAAATTGGATGTGTCTGTAACATCCTGCTGTAAATTTTACTTTCAAGATCATAGACATCACTAAAAAAGGAGGAAAAGGTAAATAGGGGAATTATACTAATTACATTTTGAAAAACTGCACATAAAATAAAAATACCAACTAATGATCATTAATGTTTTTTATTTTACAAAAGACCGTGACGTCACAACAATGGTCAAGAGAAAACGCAAAATGCACTATATAAAC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_11764:HG2_10X_allpass_1945:HG3_PB_assemblyticsfalcon_3887:HG2_PB_assemblyticsPBcR_3768:HG2_Ill_tnscope_1337:HG3_PB_SVrefine2Falcon1Dovetail_7317:HG3_Ill_SVrefine2DISCOVARDovetail_8772:HG3_Ill_MetaSV_749:HG3_Ill_GATKHCSBGrefine_7977:HG3_10X_allpass_2365:HG2_PB_pbsv_12085:HG2_PB_SVrefine2PBcRplusDovetail_1654:HG2_PB_SVrefine2PB10Xhap12_8709:HG2_PB_SVrefine2Falcon1plusDovetail_1743:HG2_Ill_breakscan11_1744:HG2_Ill_SpiralSDKrefine_2454:HG2_Ill_SVrefine2DISCOVARplusDovetail_1911:HG2_Ill_MetaSV_749:HG2_Ill_GATKHCSBGrefine_8089:HG2_10X_SVrefine210Xhap12_8452:HG3_Ill_Krunchall_16038:HG2_Ill_Krunchall_16345:HG2_PB_assemblyticsfalcon_3900;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8452:HG2_Ill_GATKHCSBGrefine_8089:HG2_Ill_MetaSV_749:HG2_Ill_SVrefine2DISCOVARplusDovetail_1911:HG2_Ill_SpiralSDKrefine_2454:HG2_Ill_breakscan11_1744:HG2_PB_SVrefine2Falcon1plusDovetail_1743:HG2_PB_SVrefine2PB10Xhap12_8709:HG2_PB_SVrefine2PBcRplusDovetail_1654:HG2_PB_pbsv_12085:HG3_10X_allpass_2365:HG3_Ill_GATKHCSBGrefine_7977:HG3_Ill_MetaSV_749:HG3_Ill_SVrefine2DISCOVARDovetail_8772:HG3_PB_SVrefine2Falcon1Dovetail_7317;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00712307;ClusterMaxSizeDiff=0.00712307;ClusterMaxEditDist=0.00712307;PBcalls=9;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1266;DistBack=-73;DistForward=-1266;DistMin=-1266;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=11:10260048-10261315;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:44:0|1:37:1:0:39:1|0:0:28:83:0:0/1:63:23:0/1:133:47:1087:.:.
chr11	10292728	HG3_Ill_GATKHCSBGrefine_7978	ACAGCAATCTTGATTCTTTTTTTTTTTTTTTTTTGAAGTTAAGAATTCTTTTAGGTTGTAATATTTTCATGTTAGTTTTTAATCATTTACAATGTTCTGTGGGTCACATTTTAAACATTTTTAAATATATGAAATTCTGTATTTCTTTAAGTACAGCCACAACTACAAAGCAGAGAAACGTAAGAATACAAAAATCAAATCTGCTTCATTTATATACACGATGGGGCAGCCTAATGCACATCATAACATTAACTTTTCCAAAGAAGTTTGCTAAGAATCTGCTCCCATAATTAGTGTTAAAAATAAAGCAATCTTCCCATTTAGAAAAATCAAGACATCAGTTGATTAATAAAGCCTATTCTTCCTCCCAGCAATTTGTACTTTCTGGTCTTCATTTAGGAATTATAAATTCATGAGAAAAGAACAAATTTTTTATGGAATAAATAACTTCCAGGAACAACAGTTTATAAGTATTCAGTTGTTTAAATAAACAAAACTATTTTCCTTCCTAAAATGTAAACATCCAGTAAATGAAACATACATGATATTCCAGGTATAGAAATCTTAGTAACTCACTTATGAAAGAGGTGCATTTTGGTATGTTTGGTGGTAAGGTTTTTGTTTATCTTATGTATAAAAGTACTTGCACAAAAAAACAAGCAGTTATTACTATTTAAAATTCTATTCCTTCACCCAGTTTTCTCACTCAAGTAGAAACTCATGAATATCTGTGATTTTGGCTATAGGACCAGGCCACAGGAAAGGGCTGAAATATCTCTAAAAGTTAGGTAAAAGTGTTTTCTTGAGACTTGAAGGCAGTCATTCATCACTTTGTGCTTGAAGGCATTCCTCAGCAAACTTCTCTCGAGTCTTCAGAGTAAAGCACAGGATCTAGGCTCCCGGAAGGGGTTACTTCCAGCTGGAACACCCACCAGCAGGGCATCCTTGCAGGCATTCTGCATACAGTACTGTTGAAGCTCTGCAGCTGCCTGAGAGACCTTGATCCTCTCCACGCCAGCCTCCAACTTGAGCTGCTCTACCAAGAGCTGCAGGGCGCTCGCGCTAGCCCCGGAGGACATGGCGGCGGCGCTGGGCTCCTAGGGGCTG	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_5649:HG2_10X_allpass_1946:HG3_Ill_Krunchall_16040:HG2_Ill_Krunchall_16346:HG2_Ill_breakscan11_1745:HG4_PB_pbsv_12055:HG2_Ill_tnscope_1338:HG4_PB_SVrefine2PBcRDovetail_6057:HG4_Ill_MetaSV_785:HG4_Ill_GATKHCSBGrefine_8299:HG4_10X_allpass_2280:HG3_PB_pbsv_11766:HG3_Ill_SVrefine2DISCOVARDovetail_8774:HG3_Ill_MetaSV_750:HG3_Ill_GATKHCSBGrefine_7978:HG2_PB_pbsv_12087:HG2_PB_SVrefine2PB10Xhap12_8712:HG2_Ill_SpiralSDKrefine_2455:HG2_Ill_MetaSV_750:HG2_Ill_GATKHCSBGrefine_8090:HG2_10X_SVrefine210Xhap12_8455;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8455:HG2_Ill_GATKHCSBGrefine_8090:HG2_Ill_MetaSV_750:HG2_Ill_SpiralSDKrefine_2455:HG2_PB_SVrefine2PB10Xhap12_8712:HG2_PB_pbsv_12087:HG3_Ill_GATKHCSBGrefine_7978:HG3_Ill_MetaSV_750:HG3_Ill_SVrefine2DISCOVARDovetail_8774:HG3_PB_pbsv_11766:HG4_10X_allpass_2280:HG4_Ill_GATKHCSBGrefine_8299:HG4_Ill_MetaSV_785:HG4_PB_SVrefine2PBcRDovetail_6057;NumExactMatchSVs=14;ClusterMaxShiftDist=0.110665;ClusterMaxSizeDiff=0.110665;ClusterMaxEditDist=0.130299;PBcalls=6;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1106;DistBack=5615;DistForward=-1093;DistMin=-1093;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=11:10292729-10293852;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=559.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:25:0|1:47:0:1:28:1|0:0:44:58:0:0/1:25:9:0/1:78:43:1019:.:.
chr11	11379618	HG3_Ill_MetaSV_752	TGCCTCCATCTCCTATGCCCATGTCCAATTTTAAAATCTCTTCTGTTTTCAGAAATGGTCACATAGAGGGCACCTGATCCCATTGTCTTACCTCAAAGTTTTTTCTTTCTTTTTACCTTAGTTTTATAGTTTTGGCTTTCTGTTGAATCCAGGTATTATATTTCTCTCTATCTTAACACCAACTACATGTTACAAGGAATATAATACATCTTCACTGTATGAATGAATAGACAGATGAATAATGCAAGCTTTTTGGTTATTTCCACTGTTATTTCTAATGCCAAACTTGCCACATTTTCCCCCTCAAACTATCTCAAATTCTTCTCTAGCCAATGGCACCCTGAAACCTTCCATCATCTGAGTTTGAAATATCAATGCCATCTTTGTTGGACATTTAATAACTCATTTATAAGAACTAGGAAAGACTAAGTCTTGACTTCTAATAATCATTGAAATTATTAAAATCCAAAACAATTCTAAGGGAACAGATGGACAATGACTCAGCTAAGGCTTTGGGTCATTGGGAAAATTCCCTTTGGAAGCACAAAGGCCTGCAAGCTTGAAATCTGTTTGGTGTCTTTTGAAATTCTTGGTCTCAGAAGACCACATAGAAAAACACTTACACCACCATACAACTGTCAGCCTTCTCTAGGTGTTACCCCACCACAGCAGCTGAAGGATAATGCTAAAGGGATTCCAATTCATGACACAATGATACAAAACAGTGGCAAAGCTAACAGCCCCAATCCACACAAAACACACACACACACACACACACACACACACACACACGCACAGACATGTTATCCCAAGCTCTCGGGTTATTCTGAACTCCAGCTGGCTTGAGCCAACCATAACATTTAGAAGCAACTAGAAACTACAATCCAATTTAAGGTGTTTAATTTTCTCTGTGTCCAGGGATGGGAAATAAAAGAATCTGCTTGCAGCTTTTCTGTGAGATGTTGCATCTGGTGGTTTTCTGAGACCTTTTCAGCAGAGGAAAAATGCTGGTCCCCAGACCCCCTTCTCCTCACATCTCTCTAACTGTGTGGGCAAAGACGAGGTTGCTTTACCCAAAACTGTGGTGTCCAATGTTTTTAATTAATTTCCTTATGGCTAGCTGAGAACGGCCATGATACTAACAGTGAGCTGAGATTACTCAGACCTCTAGGTCCAAGGCCTTTGGGGAGAACCACATACCCAGTCTATCATGTGCTTCAATAACACACATTAACCTGTACACATTAACCTGCCTGGACTGCCTTCACTGGTAATTTTAGCAAAGTTTCCAGCCCTTTAACCGTGGATACATATTTTTTAAAGTCTCAAATAGCAGTGATGCCTGTTCTAGGCAATTGCTAGGGACCCTTCCTTGCTTTCTCTTCCTCCTCTTTGTCTCTGCTCCCCTGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8459:HG3_PB_pbsv_11771:HG2_PB_assemblyticsfalcon_3913:HG3_PB_assemblyticsfalcon_3900:HG2_PB_assemblyticsPBcR_3780:HG2_Ill_tnscope_1339:HG4_PB_SVrefine2Falcon1Dovetail_7342:HG3_PB_SVrefine2PBcRDovetail_5651:HG3_Ill_SVrefine2DISCOVARDovetail_8778:HG3_Ill_MetaSV_752:HG3_Ill_GATKHCSBGrefine_7982:HG3_10X_allpass_2366:HG2_PB_pbsv_12093:HG2_PB_SVrefine2PBcRplusDovetail_1661:HG2_PB_SVrefine2PB10Xhap12_8720:HG2_PB_SVrefine2Falcon1plusDovetail_1748:HG2_Ill_breakscan11_1746:HG2_Ill_SpiralSDKrefine_2465:HG2_Ill_SVrefine2DISCOVARplusDovetail_1914:HG2_Ill_MetaSV_752:HG2_Ill_GATKHCSBGrefine_8094;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8459:HG4_PB_SVrefine2Falcon1Dovetail_7342:HG3_PB_SVrefine2PBcRDovetail_5651:HG3_Ill_SVrefine2DISCOVARDovetail_8778:HG3_Ill_MetaSV_752:HG3_Ill_GATKHCSBGrefine_7982:HG3_10X_allpass_2366:HG2_PB_pbsv_12093:HG2_PB_SVrefine2PBcRplusDovetail_1661:HG2_PB_SVrefine2PB10Xhap12_8720:HG2_PB_SVrefine2Falcon1plusDovetail_1748:HG2_Ill_breakscan11_1746:HG2_Ill_SpiralSDKrefine_2465:HG2_Ill_SVrefine2DISCOVARplusDovetail_1914:HG2_Ill_MetaSV_752:HG2_Ill_GATKHCSBGrefine_8094;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00354736;ClusterMaxSizeDiff=0.00354736;ClusterMaxEditDist=0.00425985;PBcalls=10;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-1409;DistBack=-142;DistForward=-1407;DistMin=-1407;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=11:11379619-11381030;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=560.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:0|1:23:2:0:35:1|0:0:23:70:0:0/1:53:22:0/1:139:58:1630:.:.
chr11	11822987	HG3_PB_SVrefine2Falcon1Dovetail_7322	TAATCGCAGTGGCACAGTGTGTGTAATCTACACTTCTTCTAGCAGCAGGAGCAGCAGCCCAGAAGTAGGAGCTGAGAAGACAGAGGTCTCATACATCCAGAGTTAGTTTTCTGATGGATGAGTCCAGCCAAATGAGAGAAAGTGAGGGAACCCAGAGTTCTGACAAGGAAGTGGCTCAGATAATTAACCATGTGAGTTCACAAAGAAAAATGTGCAGGGCAGTACTTGTGGGATGGGACAAAAACAGGAGCCAAGGACTTGAGGACTCTTTGTGGAAGAAGAACAGGCAGGGGAGGAATGAGTACTAACAGAGCTGAATAAGAAGCTGGTCGGAAGGAGAGATTAAGGTAACAAGACCATGAGAAGGTCCTTAGCTAACTGGGAAATCAGTCCTGGAGTCACACTGGCAGCGGCTCCATCTTCGCGAAGAACAGGTTGGTACCAAGACTTGTCCCCAGAGCAGTCCTATTCCATTCATTGCATTTCCAGAGATTGACAATGCCAGGTGAGCTAACCATGCCTTTCACAACAGGTGGGTCCTGGGTTGGCTCTGCAGCAGTGTGCGTGCTCATTATAGGTAAGACCTGCCTGCAGGGCTGGAGGGGATTTGCTCCTGGCCTTCAGAACATCACGTTGTACATTCTTCCAAAGCAATGTCCCCTTGTGTTTTTGATGTTCCTAGAGACGCAAGCTTGGGTCCATGAACAATCTAAGAAAATCCTGGACTCAGAAATGCTTCTTCTTTTACACAGATGAGGTAGTGTTTTTGACCCAAATTATCTCCATTATGATAAACACCTTCCCTCAGACCTTAGCGCAAATAGATAAGCCCACTCCTCCACACATGCCCTGGCATACTTGGCCCGTAAATGGAAGATAGCTTTATTTCAAGGCAAAACCCTACTACACTGATATTTTTTTCTACTGTGTTGTGAGATATTGGGGAGAAATTGGGGATAAGAACAGTGCACCACTTCCACAGCACATAATAAGCACTCAGTAAATATTTTGTATTGGAATGAATGAATGGACACAATTTAGAAAACAGGGAAACAAAAGAGAAGAGAAAAGAAAGAGGTACCAAAACTTTTAGAAAAAAATTAAAACATCGTCTTTTTTTTTTTGAGACAGAGTCTCATTCTTGCCAGGCTGGAGTGCGGTGATGCGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTCCCAATTAGTTGGGACTACAGGTGCATGCCACCATACCCAGCTATTTTTTTTTTTTTTTTTGGATTTTTAGCAGAGACAGGGTTTCACCATATTGGCCAGGATGGTCTCGATCTCCTGACCTCATGAACCGCCTGCCTCAGGCTCCCAAAGTGCTGGGATAACAGGTGTGGGCCACCATGCCCGGCCAAAACATAGTCATTTTTACATTTGCCAAAAATCCCTCTTTGTAAACTATCAAGGAACAATTTTTTTACTATTCACTCAACTATTTCCTATAAATAAACACAGCCACACTGAGGATTATTACTTTTTTAAAAAACTTTTTTTTTTTTTTCTGAGACAGAGTCTTGCTCTGTTGCCCAGGCTAGAGTGCACTGGTACAATCTCAGCTCACTGCAACCACCGCCTCCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_3783:HG3_PB_pbsv_11774:HG2_10X_allpass_1947:HG2_Ill_tnscope_1340:HG4_PB_SVrefine2Falcon1Dovetail_7344:HG3_PB_SVrefine2PBcRDovetail_5653:HG3_PB_SVrefine2Falcon1Dovetail_7322:HG3_Ill_SVrefine2DISCOVARDovetail_8780:HG3_Ill_MetaSV_754:HG3_Ill_GATKHCSBGrefine_7984:HG3_10X_allpass_2367:HG2_PB_pbsv_12096:HG2_PB_assemblyticsfalcon_3917:HG2_PB_SVrefine2PBcRplusDovetail_1663:HG2_PB_SVrefine2PB10Xhap12_8723:HG2_PB_SVrefine2Falcon1plusDovetail_1750:HG2_Ill_breakscan11_1747:HG2_Ill_SpiralSDKrefine_2469:HG2_Ill_MetaSV_754:HG2_10X_SVrefine210Xhap12_8460:HG3_Ill_Krunchall_16054:HG2_Ill_Krunchall_16365:HG4_PB_assemblyticsfalcon_3814:HG3_PB_assemblyticsfalcon_3902;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8460:HG2_Ill_MetaSV_754:HG2_Ill_SpiralSDKrefine_2469:HG2_Ill_breakscan11_1747:HG2_PB_SVrefine2Falcon1plusDovetail_1750:HG2_PB_SVrefine2PB10Xhap12_8723:HG2_PB_SVrefine2PBcRplusDovetail_1663:HG2_PB_assemblyticsfalcon_3917:HG2_PB_pbsv_12096:HG3_10X_allpass_2367:HG3_Ill_GATKHCSBGrefine_7984:HG3_Ill_MetaSV_754:HG3_Ill_SVrefine2DISCOVARDovetail_8780:HG3_PB_SVrefine2Falcon1Dovetail_7322:HG3_PB_SVrefine2PBcRDovetail_5653:HG4_PB_SVrefine2Falcon1Dovetail_7344;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00305717;ClusterMaxSizeDiff=0.00305717;ClusterMaxEditDist=0.00305717;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1636;DistBack=15125;DistForward=-1636;DistMin=-1636;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:11822988-11824624;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:33:0|1:24:1:3:28:1|0:0:20:53:0:0/1:51:24:0/1:122:59:1618:.:.
chr11	11875598	HG4_Ill_GATKHCSBGrefine_8305	CGTGAACCCAGAAGGTGGAGCTTGCAGTGAACCGAGATCGCACCACTGCACTCCAGCTAGGGGGACAGGGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAATCCTATCCAACCAGCAAAGTCCAGCCTGAAAATTCTCCTCTTTCAACCTGATTGCATATTCTTAATCCTAAAATCCTACAGCACCTTTGGCATTTGAAAAATTCTGCTTCTTTATTATAAGTTATTTGTTATTTCAGTTAATACCTTCTATTAGATGGGAGGTTCCTCAGAGTCAGGACACTACAGCTGGAGTCCCTAGGTTCAAATACCAGCTGTCTGACATTGGACAAATTCCTTAACCTGTCAGTACCTTAGTTAATTAAGGATAATTCTAAGTACCTCCTAGCATTGGTGGGAAGATTAAATGAGTTAATACATGTAATGTGTCATGCACACAATAAGCTATCAATAGATATTAGCTATTACCACCTTCTGTTACTACCATCATTTCTATCATTACCTTCATTTCTATATCCTCCCCCAGGGGCCATCACAATGTGCTGTACATTGTTGTTATTCAACAAATATTTGTGGATTAAATGAAAATGAAATTATATTTTAGTTATGCAAGTCATTTGAAGTTGACAGCTGATTACAGCCTGTCAGCTACTTATCTTAATGTCTACAGCACTAATCCTAAATTATTGTTAGATTTGACAGGTTCTCTTATATGATCAAGTAAGACCTATTGTTACAGCTTTGAAAATTGGAACACATAGGCCGGGTGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACCAAAAATACAAAAAAAATTAGCCGGGTGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8461:HG2_10X_allpass_1948:HG2_Ill_MetaSV_755:HG4_PB_pbsv_12065:HG4_PB_SVrefine2Falcon1Dovetail_7345:HG4_Ill_manta_2851:HG4_Ill_MetaSV_789:HG4_Ill_GATKHCSBGrefine_8305:HG4_10X_allpass_2281:HG2_Ill_manta_3355:HG2_Ill_GATKHCSBGrefine_8097:HG4_PB_assemblyticsfalcon_3816:HG2_PB_pbsv_12097:HG2_PB_HySA_21865:HG2_Ill_tnscope_1341:HG3_PB_SVrefine2Falcon1Dovetail_7323:HG4_PB_SVrefine2PBcRDovetail_6063:HG4_Ill_SVrefine2DISCOVARDovetail_8565:HG3_PB_assemblyticsfalcon_3904:HG2_PB_SVrefine2Falcon2Bionano_5859:HG2_PB_SVrefine2Falcon1plusDovetail_1751;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8097:HG2_Ill_manta_3355:HG4_10X_allpass_2281:HG4_Ill_GATKHCSBGrefine_8305:HG4_Ill_MetaSV_789:HG4_Ill_manta_2851:HG4_PB_SVrefine2Falcon1Dovetail_7345:HG4_PB_pbsv_12065;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0963725;ClusterMaxSizeDiff=0.0963725;ClusterMaxEditDist=0.106118;PBcalls=10;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-960;DistBack=22471;DistForward=-860;DistMin=-860;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=302;REFWIDENED=11:11875401-11876662;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=562.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:38:0|1:38:0:1:29:0|1:48:0:1:21:0/1:36:27:0/1:91:42:1010:.:.
chr11	12152544	HG2_10X_allpass_1949	GAAAGATCCCAGTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATTCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCACAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1748:HG4_Ill_Krunchall_16616:HG3_Ill_Krunchall_16056:HG2_Ill_Krunchall_16369:HG3_PB_pbsv_11775:HG4_PB_assemblyticsfalcon_3817:HG3_PB_assemblyticsfalcon_3905:HG2_PB_assemblyticsPBcR_3785:HG2_PB_assemblyticsfalcon_3922:HG4_PB_pbsv_12066:HG2_PB_pbsv_12098:HG2_PB_HySA_21866:HG4_PB_HySA_17486:HG3_Ill_MetaSV_755:HG2_Ill_tnscope_1342:HG2_Ill_MetaSV_756:HG4_PB_SVrefine2PBcRDovetail_6064:HG4_PB_SVrefine2Falcon1Dovetail_7346:HG4_Ill_scalpel_11035:HG4_Ill_manta_2852:HG4_Ill_SVrefine2DISCOVARDovetail_8566:HG4_Ill_MetaSV_790:HG4_Ill_GATKHCSBGrefine_8306:HG4_10X_allpass_2282:HG3_PB_SVrefine2Falcon1Dovetail_7324:HG3_Ill_manta_2738:HG3_Ill_SVrefine2DISCOVARDovetail_8781:HG3_Ill_GATKHCSBGrefine_7985:HG3_10X_allpass_2368:HG2_PB_SVrefine2PBcRplusDovetail_1664:HG2_PB_SVrefine2PB10Xhap12_8724:HG2_PB_SVrefine2Falcon2Bionano_5860:HG2_PB_SVrefine2Falcon1plusDovetail_1752:HG2_Ill_scalpel_11352:HG2_Ill_manta_3356:HG2_Ill_SVrefine2DISCOVARplusDovetail_1917:HG2_Ill_GATKHCSBGrefine_8098:HG2_10X_allpass_1949:HG2_10X_SVrefine210Xhap12_8462;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8462:HG2_10X_allpass_1949:HG2_Ill_GATKHCSBGrefine_8098:HG2_Ill_SVrefine2DISCOVARplusDovetail_1917:HG2_Ill_manta_3356:HG2_Ill_scalpel_11352:HG2_PB_SVrefine2Falcon1plusDovetail_1752:HG2_PB_SVrefine2Falcon2Bionano_5860:HG2_PB_SVrefine2PB10Xhap12_8724:HG2_PB_SVrefine2PBcRplusDovetail_1664:HG3_10X_allpass_2368:HG3_Ill_GATKHCSBGrefine_7985:HG3_Ill_SVrefine2DISCOVARDovetail_8781:HG3_Ill_manta_2738:HG3_PB_SVrefine2Falcon1Dovetail_7324:HG4_10X_allpass_2282:HG4_Ill_GATKHCSBGrefine_8306:HG4_Ill_MetaSV_790:HG4_Ill_SVrefine2DISCOVARDovetail_8566:HG4_Ill_manta_2852:HG4_Ill_scalpel_11035:HG4_PB_SVrefine2Falcon1Dovetail_7346:HG4_PB_SVrefine2PBcRDovetail_6064;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0877743;ClusterMaxSizeDiff=0.0877743;ClusterMaxEditDist=0.0877743;PBcalls=16;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=18387;DistForward=-311;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=11:12152545-12152882;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=563.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:67:1/1:0:24:1:34:1/1:0:22:0:20:1/1:0:47:0/1:3:14:.:.:.
chr11	12943732	HG2_Ill_scalpel_11356	TGGTTCTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8464:HG2_PB_assemblyticsfalcon_3930:HG2_PB_assemblyticsPBcR_3793:HG3_Ill_Krunchall_16063:HG2_Ill_Krunchall_16374:HG2_PB_HySA_21876:HG3_Ill_Spiral_12519:HG2_Ill_Spiral_825:HG2_PB_HySA_21875:HG2_Ill_breakscan11_1749:HG3_PB_pbsv_11778:HG3_Ill_scalpel_11554:HG3_Ill_manta_2739:HG3_Ill_SVrefine2DISCOVARDovetail_8789:HG3_Ill_GATKHCSBGrefine_7986:HG3_10X_allpass_2369:HG2_PB_pbsv_12102:HG2_PB_SVrefine2PBcRplusDovetail_1666:HG2_PB_SVrefine2PB10Xhap12_8726:HG2_PB_SVrefine2Falcon2Bionano_5862:HG2_PB_SVrefine2Falcon1plusDovetail_1754:HG2_Ill_scalpel_11356:HG2_Ill_MetaSV_757:HG2_Ill_GATKHCSBGrefine_8099:HG2_10X_allpass_1950;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8464:HG3_PB_pbsv_11778:HG3_Ill_scalpel_11554:HG3_Ill_manta_2739:HG3_Ill_SVrefine2DISCOVARDovetail_8789:HG3_Ill_GATKHCSBGrefine_7986:HG3_10X_allpass_2369:HG2_PB_pbsv_12102:HG2_PB_SVrefine2PBcRplusDovetail_1666:HG2_PB_SVrefine2PB10Xhap12_8726:HG2_PB_SVrefine2Falcon2Bionano_5862:HG2_PB_SVrefine2Falcon1plusDovetail_1754:HG2_Ill_scalpel_11356:HG2_Ill_MetaSV_757:HG2_Ill_GATKHCSBGrefine_8099:HG2_10X_allpass_1950;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0994475;ClusterMaxSizeDiff=0.0994475;ClusterMaxEditDist=0.0994475;PBcalls=10;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-277;DistBack=-429;DistForward=47143;DistMin=-429;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=11:12943733-12944023;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=564.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:50:0|1:23:3:5:45:1|0:0:16:28:0:0/1:21:24:./.:.:.:.:.:.
chr11	13565923	HG4_Ill_manta_2854	AAATTATGGAAGCTACAATTAAAGATGAGTTTTGGGCAGGGACACAGCCAAAACATATCATATGGGATTAAGTAAAATGGCCAAACCCAGAAAGAATTGGTGTTCCTGAGGGAGAAAAGAAGTCTAAACGTTTGGAAAATTTATTTGAGGTAATAATTGAGGAAAACTTCCCTGGCCTTGCTAGAGATCTAGACATTCAAAGACAAACAGTTCAAAGAACTCCCGGGAAATTCATCACACAAAAGATCATCACCAAAGCCCACAGTCATCAGGCTATCTAAAATCAAGATGAAGGAAAAAAAATGAGCTGTGAGGCAAAAGCATCAGGTAACCTATAAAGGAAAACCCATCAGATTAACAGCAAATTA	GATTACAGGTGCCT	20	PASS	ClusterIDs=HG3_PB_pbsv_11781:HG2_PB_PB10Xdip_5211:HG4_Ill_GATKHCSBGrefine_8310:HG3_Ill_GATKHCSBGrefine_7990:HG2_Ill_GATKHCSBGrefine_8103:HG2_PB_PB10Xdip_5210:HG4_Ill_scalpel_11042:HG3_Ill_scalpel_11560:HG2_Ill_scalpel_11362:HG3_PB_HySA_18134:HG2_PB_HySA_21888:HG4_PB_HySA_17495:HG2_Ill_tnscope_1343:HG4_PB_SVrefine2PBcRDovetail_6068:HG4_PB_SVrefine2Falcon1Dovetail_7350:HG4_Ill_manta_2854:HG4_Ill_SVrefine2DISCOVARDovetail_8574:HG3_Ill_manta_2740:HG2_PB_assemblyticsfalcon_3939:HG2_PB_SVrefine2PBcRplusDovetail_1669:HG2_PB_SVrefine2PB10Xhap12_8729:HG2_PB_SVrefine2Falcon2Bionano_5865:HG2_PB_SVrefine2Falcon1plusDovetail_1757:HG2_Ill_manta_3358:HG2_Ill_SVrefine2DISCOVARplusDovetail_1921:HG2_10X_SVrefine210Xhap12_8466:HG4_PB_assemblyticsfalcon_3831:HG2_PB_assemblyticsPBcR_3800:HG4_10X_allpass_2283:HG2_10X_allpass_1951:HG4_PB_pbsv_12071:HG2_PB_pbsv_12106:HG4_Ill_MetaSV_792:HG3_Ill_MetaSV_758:HG2_Ill_MetaSV_760:HG4_Ill_Krunchall_16625:HG3_Ill_Krunchall_16069;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8466:HG2_Ill_SVrefine2DISCOVARplusDovetail_1921:HG2_Ill_manta_3358:HG2_PB_SVrefine2Falcon1plusDovetail_1757:HG2_PB_SVrefine2Falcon2Bionano_5865:HG2_PB_SVrefine2PB10Xhap12_8729:HG2_PB_SVrefine2PBcRplusDovetail_1669:HG2_PB_assemblyticsfalcon_3939:HG3_Ill_manta_2740:HG4_Ill_SVrefine2DISCOVARDovetail_8574:HG4_Ill_manta_2854:HG4_PB_SVrefine2Falcon1Dovetail_7350:HG4_PB_SVrefine2PBcRDovetail_6068;NumExactMatchSVs=13;ClusterMaxShiftDist=0.368;ClusterMaxSizeDiff=0.368;ClusterMaxEditDist=0.368;PBcalls=17;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=7;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-354;DistBack=-361;DistForward=-35;DistMin=-361;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:13565923-13566290;PctSeqSimilarity=0.982;PctSizeSimilarity=1;PctRecOverlap=0.9647;SizeDiff=0;StartDistance=-13;EndDistance=0;GTMatch=0;TruScore=98;MatchId=565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:7:26:2:29:./.:0:5:0:12:1/1:0:53:./.:2:21:.:.:.
chr11	14348310	HG3_PB_SVrefine2Falcon1Dovetail_7331	TAAGAATATGATTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_826:HG3_PB_pbsv_11786:HG2_PB_pbsv_12110:HG3_PB_HySA_18141:HG2_PB_HySA_21895:HG4_PB_assemblyticsfalcon_3836:HG3_PB_assemblyticsfalcon_3924:HG2_PB_assemblyticsPBcR_3803:HG4_Ill_Krunchall_16629:HG3_Ill_Krunchall_16074:HG2_Ill_Krunchall_16381:HG4_PB_HySA_17498:HG4_PB_pbsv_12074:HG3_Ill_MetaSV_760:HG2_Ill_tnscope_1344:HG2_Ill_MetaSV_761:HG4_PB_SVrefine2PBcRDovetail_6069:HG4_PB_SVrefine2Falcon1Dovetail_7353:HG4_Ill_svaba_15049:HG4_Ill_manta_2855:HG4_Ill_SVrefine2DISCOVARDovetail_8577:HG4_Ill_MetaSV_793:HG4_Ill_GATKHCSBGrefine_8313:HG4_10X_allpass_2284:HG3_PB_SVrefine2PBcRDovetail_5659:HG3_PB_SVrefine2Falcon1Dovetail_7331:HG3_Ill_svaba_15173:HG3_Ill_manta_2742:HG3_Ill_SVrefine2DISCOVARDovetail_8793:HG3_Ill_GATKHCSBGrefine_7992:HG3_10X_allpass_2371:HG2_PB_SVrefine2PBcRplusDovetail_1671:HG2_PB_SVrefine2PB10Xhap12_8731:HG2_PB_SVrefine2Falcon2Bionano_5867:HG2_PB_SVrefine2Falcon1plusDovetail_1759:HG2_Ill_svaba_15013:HG2_Ill_manta_3360:HG2_Ill_SVrefine2DISCOVARplusDovetail_1925:HG2_Ill_GATKHCSBGrefine_8105:HG2_10X_allpass_1952:HG2_10X_SVrefine210Xhap12_8469:HG2_Ill_breakscan11_1750:HG3_Ill_Spiral_12532;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8469:HG2_10X_allpass_1952:HG2_Ill_GATKHCSBGrefine_8105:HG2_Ill_SVrefine2DISCOVARplusDovetail_1925:HG2_Ill_manta_3360:HG2_Ill_svaba_15013:HG2_PB_SVrefine2Falcon1plusDovetail_1759:HG2_PB_SVrefine2Falcon2Bionano_5867:HG2_PB_SVrefine2PB10Xhap12_8731:HG2_PB_SVrefine2PBcRplusDovetail_1671:HG3_10X_allpass_2371:HG3_Ill_GATKHCSBGrefine_7992:HG3_Ill_SVrefine2DISCOVARDovetail_8793:HG3_Ill_manta_2742:HG3_Ill_svaba_15173:HG3_PB_SVrefine2Falcon1Dovetail_7331:HG3_PB_SVrefine2PBcRDovetail_5659:HG4_10X_allpass_2284:HG4_Ill_GATKHCSBGrefine_8313:HG4_Ill_MetaSV_793:HG4_Ill_SVrefine2DISCOVARDovetail_8577:HG4_Ill_manta_2855:HG4_Ill_svaba_15049:HG4_PB_SVrefine2Falcon1Dovetail_7353:HG4_PB_SVrefine2PBcRDovetail_6069;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0933977;ClusterMaxSizeDiff=0.0933977;ClusterMaxEditDist=0.0933977;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=1628;DistForward=4581;DistMin=1628;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=11:14348311-14348641;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:1/1:1:25:0:18:1/1:0:33:0:14:1/1:0:52:./.:1:10:.:.:.
chr11	16587163	HG2_PB_SVrefine2Falcon1plusDovetail_1763	CATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAATAAAAAAATAAAAAAATAAATAAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_11792:HG4_Ill_GATKHC_19293:HG4_Ill_GATKHCSBGrefine_8319:HG3_Ill_GATKHC_19191:HG3_Ill_GATKHCSBGrefine_7996:HG2_Ill_GATKHC_19314:HG2_Ill_GATKHCSBGrefine_8110:HG2_PB_HySA_21908:HG4_PB_SVrefine2PBcRDovetail_6073:HG4_PB_SVrefine2Falcon1Dovetail_7358:HG4_Ill_SVrefine2DISCOVARDovetail_8582:HG4_CG_vcfBeta_7692:HG3_PB_SVrefine2PBcRDovetail_5663:HG3_PB_SVrefine2Falcon1Dovetail_7335:HG3_Ill_SVrefine2DISCOVARDovetail_8797:HG3_CG_vcfBeta_6545:HG2_PB_assemblyticsfalcon_3959:HG2_PB_SVrefine2PBcRplusDovetail_1676:HG2_PB_SVrefine2PB10Xhap12_8736:HG2_PB_SVrefine2Falcon2Bionano_5871:HG2_PB_SVrefine2Falcon1plusDovetail_1763:HG2_Ill_SVrefine2DISCOVARplusDovetail_1932:HG2_CG_vcfBeta_6873:HG2_10X_SVrefine210Xhap12_8478:HG2_Ill_breakscan11_1752:HG4_Ill_MetaSV_796:HG2_Ill_MetaSV_764:HG4_Ill_Spiral_959:HG3_Ill_Spiral_12546:HG2_Ill_Spiral_827:HG4_Ill_scalpel_11060:HG4_Ill_250bpfermikitraw_15913:HG4_Ill_150bpfermikitraw_15286:HG4_10X_allpass_2286:HG3_PB_HySA_18153:HG3_Ill_scalpel_11573:HG3_10X_allpass_2373:HG2_Ill_scalpel_11378:HG2_10X_allpass_1953:HG4_PB_pbsv_12081:HG2_PB_pbsv_12117:HG4_PB_assemblyticsfalcon_3854:HG3_PB_assemblyticsfalcon_3943:HG2_PB_assemblyticsPBcR_3818:HG3_Ill_MetaSV_763:HG2_Ill_MetaSV_763;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8478:HG2_CG_vcfBeta_6873:HG2_Ill_SVrefine2DISCOVARplusDovetail_1932:HG2_PB_SVrefine2Falcon1plusDovetail_1763:HG2_PB_SVrefine2Falcon2Bionano_5871:HG2_PB_SVrefine2PB10Xhap12_8736:HG2_PB_SVrefine2PBcRplusDovetail_1676:HG2_PB_assemblyticsfalcon_3959:HG3_CG_vcfBeta_6545:HG3_Ill_SVrefine2DISCOVARDovetail_8797:HG3_PB_SVrefine2Falcon1Dovetail_7335:HG3_PB_SVrefine2PBcRDovetail_5663:HG4_CG_vcfBeta_7692:HG4_Ill_SVrefine2DISCOVARDovetail_8582:HG4_PB_SVrefine2Falcon1Dovetail_7358:HG4_PB_SVrefine2PBcRDovetail_6073;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0291971;ClusterMaxSizeDiff=0.0291971;ClusterMaxEditDist=0.029304;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=3;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=3;HG2count=19;HG3count=13;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-136;DistBack=5014;DistForward=10263;DistMin=5014;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:16587163-16587299;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=567.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:69:1/1:2:32:2:32:1/1:0:20:0:32:1/1:0:25:./.:.:.:.:.:.
chr11	16597563	HG2_PB_SVrefine2PBcRplusDovetail_1677	TGAAAACCACAACTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_828:HG3_Ill_Krunchall_16090:HG2_Ill_Krunchall_16405:HG4_PB_assemblyticsfalcon_3855:HG3_PB_assemblyticsfalcon_3944:HG2_PB_assemblyticsPBcR_3819:HG2_PB_assemblyticsfalcon_3960:HG4_PB_pbsv_12082:HG2_PB_pbsv_12118:HG2_PB_HySA_21909:HG4_Ill_MetaSV_797:HG3_Ill_MetaSV_764:HG2_Ill_tnscope_1345:HG2_Ill_MetaSV_765:HG4_PB_SVrefine2PBcRDovetail_6074:HG4_PB_SVrefine2Falcon1Dovetail_7359:HG4_Ill_scalpel_11061:HG4_Ill_manta_2856:HG4_Ill_SVrefine2DISCOVARDovetail_8583:HG4_Ill_GATKHCSBGrefine_8320:HG4_10X_allpass_2287:HG3_PB_SVrefine2PBcRDovetail_5664:HG3_PB_SVrefine2Falcon1Dovetail_7336:HG3_Ill_scalpel_11574:HG3_Ill_manta_2743:HG3_Ill_SVrefine2DISCOVARDovetail_8798:HG3_Ill_GATKHCSBGrefine_7997:HG3_10X_allpass_2374:HG2_PB_SVrefine2PBcRplusDovetail_1677:HG2_PB_SVrefine2PB10Xhap12_8737:HG2_PB_SVrefine2Falcon2Bionano_5872:HG2_PB_SVrefine2Falcon1plusDovetail_1764:HG2_Ill_scalpel_11379:HG2_Ill_manta_3361:HG2_Ill_SVrefine2DISCOVARplusDovetail_1933:HG2_Ill_GATKHCSBGrefine_8111:HG2_10X_allpass_1954:HG2_10X_SVrefine210Xhap12_8479:HG3_PB_pbsv_11793:HG2_Ill_breakscan11_1753:HG4_Ill_Spiral_960:HG3_Ill_Spiral_12547;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8479:HG2_10X_allpass_1954:HG2_Ill_GATKHCSBGrefine_8111:HG2_Ill_SVrefine2DISCOVARplusDovetail_1933:HG2_Ill_manta_3361:HG2_Ill_scalpel_11379:HG2_PB_SVrefine2Falcon1plusDovetail_1764:HG2_PB_SVrefine2Falcon2Bionano_5872:HG2_PB_SVrefine2PB10Xhap12_8737:HG2_PB_SVrefine2PBcRplusDovetail_1677:HG3_10X_allpass_2374:HG3_Ill_GATKHCSBGrefine_7997:HG3_Ill_SVrefine2DISCOVARDovetail_8798:HG3_Ill_manta_2743:HG3_Ill_scalpel_11574:HG3_PB_SVrefine2Falcon1Dovetail_7336:HG3_PB_SVrefine2PBcRDovetail_5664:HG4_10X_allpass_2287:HG4_Ill_GATKHCSBGrefine_8320:HG4_Ill_SVrefine2DISCOVARDovetail_8583:HG4_Ill_manta_2856:HG4_Ill_scalpel_11061:HG4_PB_SVrefine2Falcon1Dovetail_7359:HG4_PB_SVrefine2PBcRDovetail_6074;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0914826;ClusterMaxSizeDiff=0.0914826;ClusterMaxEditDist=0.0914826;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=10263;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=11:16597564-16597901;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:0:23:0:23:1/1:0:29:0:44:1/1:0:50:./.:2:23:.:.:.
chr11	16905547	HG4_Ill_150bpfermikitraw_15288	TCTTTTTAGAAAAAAATTCACAAATAGAATAAAATTGTACATATCATTCTATAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8480:HG2_PB_PB10Xdip_5263:HG4_PB_HySA_17515:HG4_PB_pbsv_12084:HG4_Ill_svaba_15069:HG4_Ill_scalpel_11064:HG4_Ill_manta_2858:HG4_Ill_Krunchall_16651:HG4_Ill_GATKHC_19296:HG4_Ill_GATKHCSBGrefine_8321:HG4_Ill_Cortex_539:HG4_Ill_250bpfermikitraw_15914:HG4_Ill_150bpfermikitraw_15288:HG4_CG_vcfBeta_7694:HG4_10X_allpass_2288:HG2_PB_pbsv_12120:HG2_PB_assemblyticsfalcon_3961:HG2_Ill_svaba_15031:HG2_Ill_scalpel_11382:HG2_Ill_manta_3362:HG2_Ill_SpiralSDKrefine_2487:HG2_Ill_Krunchall_16407:HG2_Ill_GATKHC_19317:HG2_Ill_GATKHCSBGrefine_8113:HG2_Ill_Cortex_1268:HG2_Ill_250bpfermikitraw_16068:HG2_CG_vcfBeta_6875:HG2_10X_allpass_1955:HG2_PB_HySA_21914:HG2_PB_assemblyticsPBcR_3821:HG4_PB_SVrefine2Falcon1Dovetail_7360:HG4_Ill_SVrefine2DISCOVARDovetail_8585:HG2_PB_SVrefine2PB10Xhap12_8738;NumClusterSVs=33;ExactMatchIDs=HG2_10X_allpass_1955:HG2_CG_vcfBeta_6875:HG2_Ill_250bpfermikitraw_16068:HG2_Ill_Cortex_1268:HG2_Ill_GATKHCSBGrefine_8113:HG2_Ill_GATKHC_19317:HG2_Ill_Krunchall_16407:HG2_Ill_SpiralSDKrefine_2487:HG2_Ill_manta_3362:HG2_Ill_scalpel_11382:HG2_Ill_svaba_15031:HG2_PB_PB10Xdip_5263:HG4_PB_pbsv_12084:HG4_Ill_svaba_15069:HG4_Ill_scalpel_11064:HG4_Ill_manta_2858:HG4_Ill_Krunchall_16651:HG4_Ill_GATKHC_19296:HG4_Ill_GATKHCSBGrefine_8321:HG4_Ill_Cortex_539:HG4_Ill_250bpfermikitraw_15914:HG4_Ill_150bpfermikitraw_15288:HG4_CG_vcfBeta_7694:HG4_10X_allpass_2288:HG2_PB_pbsv_12120:HG2_PB_assemblyticsfalcon_3961;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.0952381;PBcalls=9;Illcalls=19;TenXcalls=3;CGcalls=2;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=2;HG2count=18;HG3count=0;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-53;DistBack=58234;DistForward=-53;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=11:16905543-16905603;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:32:0|1:22:3:3:27:0|1:28:0:0:21:0/1:32:22:./.:.:.:.:.:.
chr11	16996169	HG3_PB_SVrefine2PBcRDovetail_5665	ACAGGTTTTTTTTTTTTTTTTTTTTGAACATAAACTCAAGATTTTATTGTCTTCATAATAAAAGATGACACTTAGAACTGGATCACTTGGCCCTTTCTCTTCTTATCTCCTCCCAGTTCAAAATGCTTGCATCTTTTAATAGCCAGCATTCTCTTAGATCTGCAGTTGGGCTCAACGCACTCAAGCCTTAGCACAATCTTCTTTGTAGTTTTAGCCTTTTTCCGGAAAATCGGCTTAGTTTGCCCACCATAGCCACTCTGCTTCCTGTCATAACGCCGCTTTCCCTGGGCGTACAGAGAATCCTTGCCCTTCTTGTACTGTGTCACTTTATGGGGTTGGTGCTTGCCACACTTCTTACAGAAAGTCCGGCGGGTTTTAGGGACGTTAACCATGCTTGCGTGAGCGCTATCGGCGCGGAAAGAAGC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1754:HG4_PB_assemblyticsfalcon_3860:HG3_PB_assemblyticsfalcon_3945:HG2_PB_assemblyticsPBcR_3822:HG2_PB_assemblyticsfalcon_3963:HG4_Ill_Krunchall_16654:HG3_Ill_Krunchall_16092:HG2_Ill_Krunchall_16411:HG4_Ill_MetaSV_798:HG3_Ill_MetaSV_766:HG2_Ill_tnscope_1346:HG2_Ill_MetaSV_766:HG4_PB_pbsv_12085:HG4_PB_SVrefine2PBcRDovetail_6075:HG4_PB_SVrefine2Falcon1Dovetail_7361:HG4_Ill_manta_2859:HG4_Ill_SVrefine2DISCOVARDovetail_8586:HG4_Ill_GATKHCSBGrefine_8322:HG4_10X_allpass_2289:HG3_PB_pbsv_11795:HG3_PB_SVrefine2PBcRDovetail_5665:HG3_PB_SVrefine2Falcon1Dovetail_7337:HG3_Ill_manta_2744:HG3_Ill_SVrefine2DISCOVARDovetail_8800:HG3_Ill_GATKHCSBGrefine_7999:HG3_10X_allpass_2375:HG2_PB_pbsv_12121:HG2_PB_SVrefine2PBcRplusDovetail_1678:HG2_PB_SVrefine2PB10Xhap12_8739:HG2_PB_SVrefine2Falcon2Bionano_5873:HG2_PB_SVrefine2Falcon1plusDovetail_1765:HG2_PB_HySA_21915:HG2_Ill_manta_3363:HG2_Ill_SpiralSDKrefine_2491:HG2_Ill_SVrefine2DISCOVARplusDovetail_1935:HG2_Ill_GATKHCSBGrefine_8114:HG2_10X_allpass_1956:HG2_10X_SVrefine210Xhap12_8481;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8481:HG2_10X_allpass_1956:HG2_Ill_GATKHCSBGrefine_8114:HG2_Ill_SVrefine2DISCOVARplusDovetail_1935:HG2_Ill_SpiralSDKrefine_2491:HG2_Ill_manta_3363:HG2_PB_HySA_21915:HG2_PB_SVrefine2Falcon1plusDovetail_1765:HG2_PB_SVrefine2Falcon2Bionano_5873:HG2_PB_SVrefine2PB10Xhap12_8739:HG2_PB_SVrefine2PBcRplusDovetail_1678:HG2_PB_pbsv_12121:HG3_10X_allpass_2375:HG3_Ill_GATKHCSBGrefine_7999:HG3_Ill_SVrefine2DISCOVARDovetail_8800:HG3_Ill_manta_2744:HG3_PB_SVrefine2Falcon1Dovetail_7337:HG3_PB_SVrefine2PBcRDovetail_5665:HG3_PB_pbsv_11795:HG4_10X_allpass_2289:HG4_Ill_GATKHCSBGrefine_8322:HG4_Ill_SVrefine2DISCOVARDovetail_8586:HG4_Ill_manta_2859:HG4_PB_SVrefine2Falcon1Dovetail_7361:HG4_PB_SVrefine2PBcRDovetail_6075:HG4_PB_pbsv_12085;NumExactMatchSVs=26;ClusterMaxShiftDist=0.04038;ClusterMaxSizeDiff=0.04038;ClusterMaxEditDist=0.04038;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-424;DistBack=-425;DistForward=5886;DistMin=-425;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=11:16996170-16996602;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=570.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:37:1/1:0:14:3:17:1/1:0:15:0:14:1/1:0:40:./.:2:18:.:.:.
chr11	17195839	HG4_Ill_manta_2860	TAAAACAAAACAGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1755:HG3_Ill_Krunchall_16095:HG4_PB_HySA_17519:HG3_PB_pbsv_11798:HG4_PB_pbsv_12088:HG2_PB_pbsv_12124:HG4_Ill_MetaSV_799:HG3_PB_HySA_18155:HG3_Ill_MetaSV_767:HG2_PB_HySA_21919:HG2_Ill_tnscope_1347:HG2_Ill_MetaSV_767:HG4_PB_SVrefine2PBcRDovetail_6077:HG4_PB_SVrefine2Falcon1Dovetail_7363:HG4_Ill_scalpel_11068:HG4_Ill_manta_2860:HG4_Ill_SVrefine2DISCOVARDovetail_8587:HG4_Ill_GATKHCSBGrefine_8323:HG4_10X_allpass_2290:HG3_PB_SVrefine2PBcRDovetail_5667:HG3_PB_SVrefine2Falcon1Dovetail_7339:HG3_Ill_scalpel_11578:HG3_Ill_manta_2745:HG3_Ill_SVrefine2DISCOVARDovetail_8802:HG3_Ill_GATKHCSBGrefine_8000:HG3_10X_allpass_2376:HG2_PB_SVrefine2PBcRplusDovetail_1680:HG2_PB_SVrefine2PB10Xhap12_8741:HG2_PB_SVrefine2Falcon2Bionano_5875:HG2_PB_SVrefine2Falcon1plusDovetail_1767:HG2_Ill_scalpel_11388:HG2_Ill_manta_3364:HG2_Ill_SVrefine2DISCOVARplusDovetail_1936:HG2_Ill_GATKHCSBGrefine_8115:HG2_10X_allpass_1957:HG2_10X_SVrefine210Xhap12_8484;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8484:HG2_10X_allpass_1957:HG2_Ill_GATKHCSBGrefine_8115:HG2_Ill_SVrefine2DISCOVARplusDovetail_1936:HG2_Ill_manta_3364:HG2_Ill_scalpel_11388:HG2_PB_SVrefine2Falcon1plusDovetail_1767:HG2_PB_SVrefine2Falcon2Bionano_5875:HG2_PB_SVrefine2PB10Xhap12_8741:HG2_PB_SVrefine2PBcRplusDovetail_1680:HG3_10X_allpass_2376:HG3_Ill_GATKHCSBGrefine_8000:HG3_Ill_SVrefine2DISCOVARDovetail_8802:HG3_Ill_manta_2745:HG3_Ill_scalpel_11578:HG3_PB_SVrefine2Falcon1Dovetail_7339:HG3_PB_SVrefine2PBcRDovetail_5667:HG4_10X_allpass_2290:HG4_Ill_GATKHCSBGrefine_8323:HG4_Ill_SVrefine2DISCOVARDovetail_8587:HG4_Ill_manta_2860:HG4_Ill_scalpel_11068:HG4_PB_SVrefine2Falcon1Dovetail_7363:HG4_PB_SVrefine2PBcRDovetail_6077;NumExactMatchSVs=24;ClusterMaxShiftDist=0.00636943;ClusterMaxSizeDiff=0.00636943;ClusterMaxEditDist=0.00958466;PBcalls=14;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=113933;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=309;REFWIDENED=11:17195840-17196461;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:0:12:1:20:1/1:0:40:0:31:1/1:0:26:./.:1:12:1820:.:.
chr11	17209752	HG3_PB_SVrefine2Falcon1Dovetail_7340	GTGCATGCCTGTAATCTGCAGCTACTCAGGAGTCTGAGGCAGGAGAATCACTTGAGCCCAGGAGGTGGAGATTGCAGTGAGCTGAGATCATGCACCACTACACTCCAACCTGGGTGACAGAGTGAGACCCTGTCTCAAAAAAAAAGAAAAAGAAATGTCACAGAACAGAGAACACACAAACACCTAATGAATTAAATTTCAGAAAGTGATAGCCCTTTAATAGAGAGAGAGGCCCAACACTACTCTCTTCCCTGGTGCAGCAGCATCAGGAGAAAACGTACTGTAGATGGGGATAAGAAGAAACAAACCAGACTTTTAAGAAATTTTTAATGCCAAATGTAGGCTAGCATGACAGATTAAAATTCTAAGGCGTGGTGGAGGTAAAGCTGAGTAGTCTAATGTGCTGGAAAAAGAATTACAAGGAGCCCCAGACATGGAACCCATCTGTACCCATCTACCAACTCTCCTACAGGTCTTCACTAAATACACAGGTAGCACACTGAAAGCTGAAGACAGATCAGAAGAACTGAAAGAGATCCCATCTGAAGTATGTAGGCCTCCCTGAAGTACAAGGCAGTTATCTTCCAAAGGAGGATTGGCAAGTGGCAGACAGAAATCCATCTGAGGTAATCCAAGCTTTTGGCTACCAAAGGCTGTGGAGGCAAGAGCTGAGAAAAAGCTCTCCACGGCATTCCAGGCCTTCACAGAATGTAAAACAGCTGCCCTCCTGAGGCAAGGGTAAGAGCAGCAAGGCAGAGATCTCCTTTGCTGCAGAGATCTCCTGAGACACAGAAAGGCAAGAAGCACAATTAAAGAACAAAGAGAACCTCCCAGCGACCTAAAAAGCTGGCAGCTCAGCTGGCAAAACAGATCTCTGAAATCATGTCAGTGCTTAGATCCCAAATCCTGCTGAGGAGAAAGTCATAATTCTGCCCCAAAGTATTTGGACCCAGTGGTAAACTGAATCAAACTACAGCTGCAACAAAGCACAGACTCATCTTACTTATAAATTAGACTTACTCAATTTAGTGGCCAGACAGAATAAATGGAATTTTGGAGGTAAATATTAAGTAAAAAATAAGTAAACTTCAGGTTCTCCTTTGTTTTATAGAAGCTGTCTGGTATACATGCCAGGTACGGCAGCTCACGCCTGTAATCCCAGCACTATGGCAGGCCGAGGCGGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCGTGGCCAAGATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTAGCACAGGCCTGTAATCCCAGATACTCAGGAGACTGAGGCTGGAGAATTGCTTGAACTTGGGAGGCAGAGATTGTGGTTGTTTTTAGTATATTCAGTTGTTTTTAGTATATTTTTAGTATATTCACAGGCGTGTGACCATCACTACTACCAAGTTTCAGAATACTTTCATCGCCCCATAAAGAAACCC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8485:HG2_PB_pbsv_12125:HG3_10X_allpass_2377:HG3_PB_assemblyticsfalcon_3949:HG2_10X_allpass_1958:HG3_PB_pbsv_11799:HG2_Ill_MetaSV_768:HG2_PB_HySA_21921:HG2_Ill_tnscope_1348:HG3_PB_SVrefine2PBcRDovetail_5668:HG3_PB_SVrefine2Falcon1Dovetail_7340:HG3_Ill_MetaSV_768:HG3_Ill_GATKHCSBGrefine_8001:HG2_PB_SVrefine2PB10Xhap12_8742:HG2_PB_SVrefine2Falcon1plusDovetail_1768:HG2_Ill_SVrefine2DISCOVARplusDovetail_1937;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8485:HG3_PB_SVrefine2PBcRDovetail_5668:HG3_PB_SVrefine2Falcon1Dovetail_7340:HG3_Ill_MetaSV_768:HG3_Ill_GATKHCSBGrefine_8001:HG2_PB_SVrefine2PB10Xhap12_8742:HG2_PB_SVrefine2Falcon1plusDovetail_1768:HG2_Ill_SVrefine2DISCOVARplusDovetail_1937;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0899836;ClusterMaxSizeDiff=0.0899836;ClusterMaxEditDist=0.0899836;PBcalls=8;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1463;DistBack=6559;DistForward=-1460;DistMin=-1460;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=11:17209753-17211219;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=572.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:21:1|0:3:16:19:1:1|0:1:43:75:1:0/1:43:15:0/1:105:61:1820:.:.
chr11	17946735	HG2_10X_SVrefine210Xhap12_8486	TGGGCACCACGAAAGAGATACAGTAACCCACCAAGTCTCTAAGGTCCCAGAAGTCCATCTGTCTGTCACACACATCACAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8486:HG3_Ill_GATKHC_19208:HG3_Ill_GATKHCSBGrefine_8003:HG2_Ill_GATKHC_19337:HG2_Ill_GATKHCSBGrefine_8117:HG2_PB_PB10Xdip_5274:HG2_PB_PB10Xdip_5273:HG2_PB_HySA_21933:HG4_PB_pbsv_12093:HG2_PB_pbsv_12130:HG3_PB_pbsv_11804:HG4_PB_HySA_17530:HG3_PB_HySA_18166:HG4_PB_SVrefine2PBcRDovetail_6079:HG4_PB_SVrefine2Falcon1Dovetail_7366:HG4_Ill_svaba_15083:HG4_Ill_scalpel_11078:HG4_Ill_SVrefine2DISCOVARDovetail_8591:HG4_Ill_GATKHCSBGrefine_8326:HG4_Ill_250bpfermikitraw_15928:HG4_Ill_150bpfermikitraw_15305:HG3_PB_SVrefine2Falcon1Dovetail_7342:HG3_Ill_svaba_15198:HG3_Ill_Krunchall_16104:HG3_Ill_GATKHCSBGrefine_8002:HG3_Ill_250bpfermikitraw_15634:HG2_PB_assemblyticsfalcon_3978:HG2_PB_assemblyticsPBcR_3835:HG2_Ill_svaba_15043:HG2_Ill_manta_3366:HG2_Ill_SpiralSDKrefine_2498:HG2_Ill_Krunchall_16422:HG2_Ill_GATKHCSBGrefine_8116:HG2_Ill_250bpfermikitraw_16083;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8486:HG4_PB_SVrefine2PBcRDovetail_6079:HG4_PB_SVrefine2Falcon1Dovetail_7366:HG4_Ill_svaba_15083:HG4_Ill_scalpel_11078:HG4_Ill_SVrefine2DISCOVARDovetail_8591:HG4_Ill_GATKHCSBGrefine_8326:HG4_Ill_250bpfermikitraw_15928:HG4_Ill_150bpfermikitraw_15305:HG3_PB_SVrefine2Falcon1Dovetail_7342:HG3_Ill_svaba_15198:HG3_Ill_Krunchall_16104:HG3_Ill_GATKHCSBGrefine_8002:HG3_Ill_250bpfermikitraw_15634:HG2_PB_assemblyticsfalcon_3978:HG2_PB_assemblyticsPBcR_3835:HG2_Ill_svaba_15043:HG2_Ill_manta_3366:HG2_Ill_SpiralSDKrefine_2498:HG2_Ill_Krunchall_16422:HG2_Ill_GATKHCSBGrefine_8116:HG2_Ill_250bpfermikitraw_16083;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0636943;ClusterMaxSizeDiff=0.0636943;ClusterMaxEditDist=0.0774194;PBcalls=13;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-79;DistBack=28315;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=88;REFWIDENED=11:17946736-17946902;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=573.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:1:27:0:32:1/1:0:6:0:12:1/1:0:43:./.:.:.:.:.:.
chr11	20844554	HG2_PB_SVrefine2Falcon1plusDovetail_1781	ACAAGGGTCATAAATGAACCATGAAGGAAAACAGTACAGTAAACAGCAGAAAATACAAGGTCTGTATATTAGTCTGTTTTCCAGCTGCTGATAAAGGCATACCTGAGACTGGGCAATTTACAAAAGAAAGAAGTTTAATTGGACTTACAGTTCCACATGGCTGGGGAAGCCTCTCATTATGGTGGAAGGCAAGGAGGATCGAGCTGCATCTTACATGAATGGTAGCAGGCAGAGAGAATGAGGAAGATGCAAAAGCAGAAACTCCTGATAAAACCATCAGATCTCGTGAGACTTATATCTACCACCACTAGAACAGTATGGGCGAAACTGTCGCCATGATTCAATGATCTCCCACTGGGTCTCTCCCACAACATGTGGGAAATATGGGAGTACAATTCAAGGTGAGATTTGGGTGGGGACACAGGGTCAAACCATATCAGTCTGGAAGGGGCAGCAGCAGTAGGACTGCAGGGAGGGTCACATGGAAACATTGAGTCTTTTTCCACACATGCAGCCAAATCCCCTTGGACTTCAGAAGGCACAGAAGACATGGCTGAATATTTTAATTGCTTGGAGAGCTTTTAAATATAAAATTCGGAAATTGTTATAAAATCTCCTGAATCTGAGTGCTTGGGAATTTGGTCTGGGAATGTCAGTTTTAAATAAGTTTCCAGGTGATTCTAATGCAAATACTCTGCCAAGTATGTGGGAATCACAGGAGGGTAGCTATACTGTATGCCCTCTCTCAAAAAGGCCATAGAGAGGAAACAGCCACCCAACCAGTGGTGGAAGGCGAGCCAAGGCTCATGGAAATCCTTCAGAAATGCCCCTGCACCTGCCCCGAAGAAAGCCTCACACAATCTAAATTGGTTAGGATACAGGAGTGACTACTGAAGCAAATACTCAAACAACAATGATTTAAACAAGATGGAAGGGTAATACTCTTTCATGCAGCAGTTTGAATGTGGGTAGTTAATATGGTCTGGCTGTGCATCCTCACCCAAATCTCATCTTGAGCTGTAATCCAAATTGTAATCCCATGTGTTGGGAGAGGGACCTGGTGGGAGGTGATTAGATCATGGAGGTGATTCCCCCCATGCTGTTCTCATGATAGTGAATGTGTTCTATGAGATCTGCTGGCTTTATAAGGGGCTTTCCCCCACTTCGCTCTGTGCTTCTTATTCCTGCTGCCATGTGAAGAAGGACGTATTTGCTTCTCCTTCTGCCATGAATGCAAGTTTCCTGGGGACTTCCCAGCCAAGCTGAACTGTGAATTAATTAAACCTCTTCCCTTTATAAATTACACAGTCTCAAGTATGTCTTCATTAGCAGTGTGAGAACAGACTACTACAGTAAATTGGTGCCAGGAGTGGGTTGCTGCCATAAGGATACCTGAAAATGTGGAAGCAACTTTGAAACTGAGTAACAGGCAGGGGTTGGAACAGTTTGGAGGGCTCAGAAGAAGATAGGAAAATGTGGTAAAGTTTGGAACTTCCTAGACACTTGGAGGGCCCAGAAGACAGGAAGATGTGGGAAAGTTTAGAACTTCCTAGAGAATTGTTGAATGGCTTTGCCCAAAATGCTGATAGTAATATGGACAATGAAGTCGAGGCTGGGATGGTCTCAAACAGAGATGAGGAACTTGTTGGGAAATGGAGCAAATATGACTCTTGTTATGCTTTAGCAAATAGACTGTTGGTATTTTGCCTCTGCCCTAGAGATCTGTGAAACTTTGAATTTGAAAGAGATAATTTAGGATATCTGGCAGAAGAAATTTCTAAGCAGCAAAGAATTCAAGAGGAAGCAGAACATAAAAGTTTGGAAAGTTTGTAGACTGACAATGCGATAGAAAAAATCCATTTTGGGGAGAAATTCAAACCAGCTGCAGACATTTGCATAAGTAACAAGCAGCCGAATGTTAATCACTAAGACAATATGGAAAATGTCTCCAGGGCATGTCAGAGACCTTAGCAGCAGCCACTCCCATCACAGGTCCAGAGGCCTAGGAAAGAAAAATGGTTCCCTGAGCCAGGCCATTGCTTCAGAGGGTGCAAGCCCCAAGTCTTGGCAGACTTTATGTGGTGTTGGGCCTGTAGGTCCACAGAGGTCAAAAATTGATGTTTGGGAACCTCTGCCTAGATTTCAGAGGCTGTATGGCAATGCCTGCTTATCCAAGCACAGTTTGCTGTACGGACAAAACTCTCATAGAGAACCTCTGCTAGGGCAGTACAGAAAGGAAATGTAGAGTCAGAGCCTCCACACACAATCCCCACTGGGTCACTGCCTAGTAGAGATGTGAGAAGAGGGCAACTGTCCTCCAGACCCCAGAATGGTAGATCTACCGACATCTTGTGCCATGAACCTGGAAAAGTTGCAGATACTCAATGCCTGCCCATTAAAGCAGCTGGGAAGGGAACTGTACCCTGAAAAGCCACAGGGGCAGAGTTGCCCAAGGCCATGGGAGTCCACCTCTTGCATCTGTGTGACCTGGATGTGAGACATGGAGTCAAAGGAGATTATTTTGGAGCTTTAAGATTTGATTATTGCCTCATTGGATTTCGAACTTGCATGGGCCTGCAGCCTCTTTGTTTTTGCTAATTTCTCCCTTTGGAATGGGTGTATTAAGCCAATACCTGTACCTCCATTGTATCTAGGAAGTAACTAACTTGCTTTTCATTGTACAGGCTCATAGGTGGAAGGAACTTACATTATCTCAGATAAGAATATGGACTTGGACTTTTGGGCAAATGCTGAAATAAGTTAAGACTTTGGGGAACTGTTGGGAAGGCATATTTGTGTTTTGAAATGTGAGAAACACATTTCAAACCTGGGAGGGGCCAGGGGTGGAATGATATGGTCCGGCTCTATGTCCCCACCCAAATCTCATCTTGAATTGTAATTCCCATGTGTTTGGAGAGGGACCTTGTGGGAGGTGATTAGATAATGGAGGTGGTCCCCCATGCTGTTCTTGTGATAGTGAGTGAGTTCTCACAAGATCTGATAGTTTTATAAGGGGCTTTCCCCACTTTGCTCTGCACTTCTTCTTCCTACCACCATGTGAAGAAGGATGTGTTTGCTGCTTTTTCCATCATGATCATAAGTTTCCTGAGGCCTCCCCAGCCATGCTGAACTGTGTTTCAAACCTCTTTCTTTTATAAATTACCCAGTCTCGGGTACGTCTTTATTAGCAGCATGAGAATGGACTAATATAGTAGTCCAGAGTTTATGTGACAACTTTACAGGACCGAGAAACTAGGTTCTTCTATATTATGGCCCTCTGCCTGTAGTCCTTGATGATTCAGTCCCATTACCTCACTATGCCAGCATGAAGGAGAACAAGAAGAAGTCAAGAGCATTCTCCTTACATGCATTACTTTCACTCATGTCCCACTGGTGAGAGCTTAATCTCATGACCACGCCTAGCTGTAAGGAAGATGGTGAATGTGACCTTTATTCTAGATGGCCGTGTGCTTCACTAAGATTCAATTACTAAAGGAAAGGGGAGAGTGCACACCAGGGGACAGCTGGCATTCTCTGCCTCCAACATTCTTCAGATTTTCACTCACAGGGTCCTGAACTCCTCTCTGGACACTCCTCTCTGGTTAATTATTTTTTATTGCACAATTCTGGATTAGGAACCGGCTGGGGGATTGACACCCCTTCAGGAAAATCACCCAAAGGCTGACCTATAGAAGCTGGCCTTCCCTGAAGTTATTGCCATAAAAACCCCTCCAAGCAAGAATCAGCCTTAGTGGAACTAATCTCGGTATTTGCCTGATACATCTTAAATTTGCTTGTTCAGGTGAACAAGACCTTTGCATGGAGGAGTGAGACAGACTGGACGTCAGTAGAGAGATTATATTTAGCTGAGTTGAAGGGAAGGGAACTAACATTTGCTGAAGGTATACTTTTGTGTGTTAATTGTTTTCGATATGCGATAACACATTCACCCAGAAGACCTGAGTGTCAGATCTGGCTCTATTGCTCACTGGCAGTTAGTTTAACTATAATACCTTTGAGAGGTTTATGCTGGAATTGCCAAGACACAGCCCTGGTTTTGCAATAGGAGTGCGGAAAGAACCATGGCTTGGTTTATCTGAGTCGAAATATTTTCATGTGTTAAGATGGGGATTCTAATAGTGCCTGCCAAGACACGAACATTAATGTCTAATTTCCAATTCCATGGACCCCCTTATACTATGATTGGAAGAGCCTGAGTGACCAGTGTCAAAGTAAACTTATGTTTTTATTCTTGTGCCAAAGCTCTGTAGATACTGTCAGTGCTCATTATTGTGTTATCAAATGAAGCAGGAGAAAGTAAGTCTTTCTTTCTGTATGGCTTGGAGGGATTTTCAAGGCTTATAATTAGGAACTATTTCTCATTGACGGTTTTAGCTAGGGATGTACCATATTTATATGTTGCTCACATAAAAGACCAATTCAGGTGTTTCTGGCTAGGTATCTGTCCTGGGAAGCTCTTCTTCTAGTGGAAAGTTAGAGGCCTAGACTCTGTCCACTTCGTCATTCTTCCATCTTCAACATGTGGTATTCCAGGTGTTTCTGAGGGTTGTCTTTATTCCAGCAACCAGAAAGAGGATTGCATGTAGGAGGTTTAGGGTCAGCCTTGGAAGCAGTACACATGTATCAATTACTTCTGCTGACATTTCATTGTCCGGAACTCAAGCATATGGCCACACCTAGTATTATTAGCAAGAAAGGCTGGGAAATGAGTCCTAGCTCTGTGCCAAGAAGAAAAGTAAATTGGTTATGATTTTCTTCCACCCTAAGTTAATGTGTACTATCTTATTTTTAAAAACACAATATTCTCTGTGGGGGAGTGATGAGGTTGTGCAAAACTGTTTAAGTGACTTCCTTCTGTTGTGATGGGCACCATAGATTAAAAATATCTTAGTCCCAAAGGGAGACTGCTAACCGCTGTTGACTCTATGCTACCTACTCCCAACAGCCTCAGCATCTCTTTATTGGTGCTAGAAACTTCATTTCCTTTACAACATCCTAGACATAGTGTCATGGAGCAGAAAGGGCATCTTTAGTATTATATAAACTTGGGTTTCTATCTTGGATCTACCACTTACTGGTTGTATTTTCTTGGATGACTTTATATCTTTGAACTTCAGCTTCTTCATCTGTAAACTAGGTATAATCATATCTGCCCAATGGGCATACTTTAAGGATTTAAGACAATGTCTGGCACATAGGCACTCAATAATTGTCAAATGTTATTATTATTTAGATCCCACGCTTTCTGTCCTAAGTTTAAAGGGCATGATTTAAATGAGATATTCTGAATATCTTGTTAATCTTGCATGTTCTACTCTTGGAATATCTATTAAAATTAGCCATATTTGAAATGTAGTCTCCACATATAACTTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8499:HG3_10X_allpass_2382:HG2_PB_assemblyticsPBcR_3866:HG2_10X_allpass_1960:HG3_Ill_Krunchall_16131:HG2_Ill_Krunchall_16451:HG3_PB_pbsv_11812:HG2_Ill_tnscope_1350:HG3_PB_SVrefine2Falcon1Dovetail_7352:HG3_Ill_MetaSV_775:HG2_PB_pbsv_12140:HG2_PB_SVrefine2PBcRplusDovetail_1690:HG2_PB_SVrefine2PB10Xhap12_8757:HG2_PB_SVrefine2Falcon1plusDovetail_1781:HG2_Ill_breakscan11_1756:HG2_Ill_SpiralSDKrefine_2516:HG2_Ill_SVrefine2DISCOVARplusDovetail_1950:HG2_Ill_MetaSV_772;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8499:HG3_PB_SVrefine2Falcon1Dovetail_7352:HG3_Ill_MetaSV_775:HG2_PB_pbsv_12140:HG2_PB_SVrefine2PBcRplusDovetail_1690:HG2_PB_SVrefine2PB10Xhap12_8757:HG2_PB_SVrefine2Falcon1plusDovetail_1781:HG2_Ill_breakscan11_1756:HG2_Ill_SpiralSDKrefine_2516:HG2_Ill_SVrefine2DISCOVARplusDovetail_1950:HG2_Ill_MetaSV_772;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00185529;ClusterMaxSizeDiff=0.00185529;ClusterMaxEditDist=0.00185529;PBcalls=7;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-5393;DistBack=23946;DistForward=-5392;DistMin=-5392;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=11:20844555-20849950;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=574.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:66:./.:13:11:13:13:0|1:66:0:0:17:0/1:43:20:0/1:362:178:5509:.:.
chr11	21789070	HG4_Ill_scalpel_11100	CAAGAATGCCTGTCATTCCAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_12107:HG2_PB_HySA_21975:HG2_PB_PB10Xdip_5351:HG4_Ill_manta_2864:HG3_Ill_manta_2747:HG2_Ill_manta_3369:HG2_Ill_SpiralSDKrefine_2525:HG4_Ill_Spiral_962:HG3_Ill_Spiral_12580:HG2_Ill_Spiral_830:HG4_Ill_svaba_15119:HG4_Ill_scalpel_11100:HG4_Ill_Krunchall_16699:HG4_Ill_250bpfermikitraw_15958:HG4_Ill_150bpfermikitraw_15340:HG4_10X_allpass_2294:HG3_PB_pbsv_11814:HG3_Ill_svaba_15231:HG3_Ill_Krunchall_16139:HG3_Ill_250bpfermikitraw_15667:HG3_Ill_150bpfermikitraw_15194:HG3_10X_allpass_2383:HG2_PB_pbsv_12142:HG2_Ill_svaba_15077:HG2_Ill_scalpel_11420:HG2_Ill_Krunchall_16458:HG2_Ill_250bpfermikitraw_16119:HG2_Ill_150bpfermikitraw_15190:HG2_10X_allpass_1961;NumClusterSVs=29;ExactMatchIDs=HG2_10X_allpass_1961:HG2_Ill_150bpfermikitraw_15190:HG2_Ill_250bpfermikitraw_16119:HG2_Ill_Krunchall_16458:HG2_Ill_scalpel_11420:HG2_Ill_svaba_15077:HG2_PB_pbsv_12142:HG3_10X_allpass_2383:HG3_Ill_150bpfermikitraw_15194:HG3_Ill_250bpfermikitraw_15667:HG3_Ill_Krunchall_16139:HG3_Ill_svaba_15231:HG3_PB_pbsv_11814:HG4_10X_allpass_2294:HG4_Ill_150bpfermikitraw_15340:HG4_Ill_250bpfermikitraw_15958:HG4_Ill_Krunchall_16699:HG4_Ill_scalpel_11100:HG4_Ill_svaba_15119;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0322581;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.0645161;PBcalls=5;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-61;DistBack=139;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=11:21789071-21789148;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=575.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:1:30:1:22:1/1:0:20:0:13:1/1:0:46:./.:.:.:.:.:.
chr11	23210173	HG4_Ill_250bpfermikitraw_15987	CTCCTGCCCCAGAAAAGCAGAGAAGGGGTAGAGACAAGGGGAGAAGGGGTTGAGGGGTACTTG	C	20	PASS	ClusterIDs=HG2_PB_HySA_21996:HG4_PB_pbsv_12120:HG4_Ill_250bpfermikitraw_15987:HG3_PB_pbsv_11828:HG2_PB_pbsv_12154;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_250bpfermikitraw_15987;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.0634921;ClusterMaxEditDist=0.0645161;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=14997;DistForward=77;DistMin=77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=165;REFWIDENED=11:23210149-23210375;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:20:0|1:28:2:1:25:./.:19:1:0:0:0/0:16:0:./.:.:.:.:.:.
chr11	25068857	HG2_10X_allpass_1964	TTAAGAATAGTATTGTTTTTATTTTTTTTATTTTTTTTTTTTTTACTTTTTAATTTTCTTTTTTTTATTTTTTTTAATTTTTTTTAATTTTTTTTTTATTATACTC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1758:HG2_Ill_Krunchall_16505:HG4_Ill_Krunchall_16746:HG2_PB_pbsv_12170:HG4_PB_pbsv_12138:HG4_Ill_svaba_15166:HG4_Ill_manta_2875:HG4_Ill_GATKHC_19407:HG4_10X_allpass_2300:HG2_PB_SVrefine2PBcRplusDovetail_1710:HG2_PB_SVrefine2Falcon2Bionano_5899:HG2_Ill_svaba_15124:HG2_Ill_SpiralSDKrefine_2556:HG2_Ill_GATKHC_19439:HG2_Ill_GATKHCSBGrefine_8151:HG2_10X_allpass_1964:HG2_10X_SVrefine210Xhap12_8514;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8514:HG2_10X_allpass_1964:HG2_Ill_GATKHCSBGrefine_8151:HG2_Ill_GATKHC_19439:HG2_Ill_SpiralSDKrefine_2556:HG2_Ill_svaba_15124:HG2_PB_SVrefine2Falcon2Bionano_5899:HG2_PB_SVrefine2PBcRplusDovetail_1710:HG4_10X_allpass_2300:HG4_Ill_GATKHC_19407:HG4_Ill_manta_2875:HG4_Ill_svaba_15166:HG4_PB_pbsv_12138;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0682927;ClusterMaxSizeDiff=0.0682927;ClusterMaxEditDist=0.0882353;PBcalls=4;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-105;DistBack=3039;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=11:25068858-25068982;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=577.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:37:0|1:30:3:3:32:1|0:0:30:34:1:0/1:36:14:./.:.:.:.:.:.
chr11	25432504	HG3_Ill_manta_2757	ATTATTTAACTACTGATTCATGTAATTGTTTAAAGTGAATTTATAATTATTAGACCAATTTTTGTTATTATTCTTATGGGGGTTTTGACCAATTTTCTATTTTTTAGGAAGGACACTTTTGAAAAAATATATATATATTTAAAATTCATTTTTGCACTTGATATAATTTTTTTCAATGAACTTTTTTGATCCAATAGCACAAGCAATGAGTTATAAAAAAAAA	TT	20	PASS	ClusterIDs=HG2_PB_HySA_22028:HG4_PB_HySA_17619:HG4_PB_pbsv_12141:HG4_Ill_GATKHCSBGrefine_8367:HG3_Ill_GATKHCSBGrefine_8043:HG2_Ill_GATKHCSBGrefine_8153:HG3_PB_HySA_18247:HG4_Ill_svaba_15171:HG4_Ill_scalpel_11142:HG4_10X_allpass_2301:HG3_Ill_svaba_15281:HG3_Ill_scalpel_11651:HG3_10X_allpass_2389:HG2_Ill_svaba_15129:HG2_Ill_scalpel_11459:HG2_10X_allpass_1965:HG2_Ill_tnscope_1352:HG4_PB_assemblyticsfalcon_3972:HG4_PB_SVrefine2PBcRDovetail_6109:HG4_PB_SVrefine2Falcon1Dovetail_7398:HG4_Ill_manta_2877:HG4_Ill_SVrefine2DISCOVARDovetail_8625:HG3_PB_assemblyticsfalcon_4066:HG3_PB_SVrefine2Falcon1Dovetail_7372:HG3_Ill_manta_2757:HG3_Ill_SVrefine2DISCOVARDovetail_8846:HG2_PB_assemblyticsfalcon_4078:HG2_PB_assemblyticsPBcR_3924:HG2_PB_SVrefine2PBcRplusDovetail_1713:HG2_PB_SVrefine2PB10Xhap12_8780:HG2_PB_SVrefine2Falcon2Bionano_5901:HG2_PB_SVrefine2Falcon1plusDovetail_1802:HG2_PB_PB10Xdip_5391:HG2_PB_PB10Xdip_5390:HG2_Ill_manta_3381:HG2_Ill_SVrefine2DISCOVARplusDovetail_1984:HG2_10X_SVrefine210Xhap12_8516:HG4_Ill_Spiral_967:HG3_Ill_Spiral_12627:HG2_Ill_Spiral_832:HG3_Ill_MetaSV_788:HG2_Ill_SpiralSDKrefine_2561:HG4_Ill_Krunchall_16754:HG3_PB_pbsv_11846:HG3_Ill_Krunchall_16192:HG2_PB_pbsv_12172:HG2_Ill_Krunchall_16511;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8516:HG2_Ill_SVrefine2DISCOVARplusDovetail_1984:HG2_Ill_manta_3381:HG2_PB_PB10Xdip_5390:HG2_PB_PB10Xdip_5391:HG2_PB_SVrefine2Falcon1plusDovetail_1802:HG2_PB_SVrefine2Falcon2Bionano_5901:HG2_PB_SVrefine2PB10Xhap12_8780:HG2_PB_SVrefine2PBcRplusDovetail_1713:HG2_PB_assemblyticsPBcR_3924:HG2_PB_assemblyticsfalcon_4078:HG3_Ill_SVrefine2DISCOVARDovetail_8846:HG3_Ill_manta_2757:HG3_PB_SVrefine2Falcon1Dovetail_7372:HG3_PB_assemblyticsfalcon_4066:HG4_Ill_SVrefine2DISCOVARDovetail_8625:HG4_Ill_manta_2877:HG4_PB_SVrefine2Falcon1Dovetail_7398:HG4_PB_SVrefine2PBcRDovetail_6109:HG4_PB_assemblyticsfalcon_3972;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0614035;ClusterMaxSizeDiff=0.0614035;ClusterMaxEditDist=0.0614035;PBcalls=19;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=13;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-221;DistBack=22038;DistForward=2492;DistMin=2492;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:25432504-25432726;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.9955;PctRecOverlap=0.991;SizeDiff=1;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=578.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:1:21:1:33:1/1:0:22:0:18:1/1:0:32:./.:.:.:.:.:.
chr11	25435219	HG3_Ill_GATKHCSBGrefine_8044	CATATATATATATATATATACACACATACACATATATATATATATACACACACATATATATATATATACACACACAT	C	20	PASS	ClusterIDs=HG2_10X_allpass_1966:HG3_PB_HySA_18248:HG2_PB_HySA_22029:HG3_PB_pbsv_11847:HG4_Ill_manta_2878:HG3_Ill_manta_2758:HG2_Ill_manta_3382:HG2_Ill_SpiralSDKrefine_2562:HG4_Ill_Spiral_968:HG3_Ill_Spiral_12628:HG2_Ill_Spiral_833:HG2_PB_pbsv_12173:HG4_PB_pbsv_12142:HG4_PB_assemblyticsfalcon_3973:HG4_Ill_svaba_15172:HG4_Ill_scalpel_11143:HG4_Ill_Krunchall_16755:HG4_Ill_GATKHC_19412:HG4_Ill_GATKHCSBGrefine_8368:HG4_Ill_250bpfermikitraw_16023:HG4_Ill_150bpfermikitraw_15399:HG4_10X_allpass_2302:HG3_PB_assemblyticsfalcon_4067:HG3_Ill_svaba_15282:HG3_Ill_scalpel_11652:HG3_Ill_Krunchall_16193:HG3_Ill_GATKHC_19313:HG3_Ill_GATKHCSBGrefine_8044:HG3_Ill_250bpfermikitraw_15731:HG3_Ill_150bpfermikitraw_15252:HG3_10X_allpass_2390:HG2_PB_assemblyticsfalcon_4079:HG2_PB_assemblyticsPBcR_3925:HG2_Ill_svaba_15130:HG2_Ill_scalpel_11460:HG2_Ill_Krunchall_16512:HG2_Ill_GATKHC_19449:HG2_Ill_GATKHCSBGrefine_8154:HG2_Ill_250bpfermikitraw_16181:HG2_Ill_150bpfermikitraw_15248;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_1966:HG4_PB_assemblyticsfalcon_3973:HG4_Ill_svaba_15172:HG4_Ill_scalpel_11143:HG4_Ill_Krunchall_16755:HG4_Ill_GATKHC_19412:HG4_Ill_GATKHCSBGrefine_8368:HG4_Ill_250bpfermikitraw_16023:HG4_Ill_150bpfermikitraw_15399:HG4_10X_allpass_2302:HG3_PB_assemblyticsfalcon_4067:HG3_Ill_svaba_15282:HG3_Ill_scalpel_11652:HG3_Ill_Krunchall_16193:HG3_Ill_GATKHC_19313:HG3_Ill_GATKHCSBGrefine_8044:HG3_Ill_250bpfermikitraw_15731:HG3_Ill_150bpfermikitraw_15252:HG3_10X_allpass_2390:HG2_PB_assemblyticsfalcon_4079:HG2_PB_assemblyticsPBcR_3925:HG2_Ill_svaba_15130:HG2_Ill_scalpel_11460:HG2_Ill_Krunchall_16512:HG2_Ill_GATKHC_19449:HG2_Ill_GATKHCSBGrefine_8154:HG2_Ill_250bpfermikitraw_16181:HG2_Ill_150bpfermikitraw_15248;NumExactMatchSVs=28;ClusterMaxShiftDist=0.025974;ClusterMaxSizeDiff=0.025974;ClusterMaxEditDist=0.0519481;PBcalls=9;Illcalls=28;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=21;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-76;DistBack=2492;DistForward=5325;DistMin=2492;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=11:25435220-25435310;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=579.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:1:16:3:37:1/1:1:16:0:20:1/1:0:48:./.:.:.:.:.:.
chr11	25680026	HG4_Ill_GATKHCSBGrefine_8374	ATTGATATGATTTAGATTATGACTTTGCATTTCATGAATTTGTCATTCCTTCCAG	A	20	PASS	ClusterIDs=HG4_Ill_Spiral_969:HG3_Ill_Spiral_12635:HG2_Ill_Spiral_834:HG4_PB_pbsv_12147:HG2_PB_pbsv_12178:HG3_PB_pbsv_11853:HG3_PB_HySA_18262:HG2_PB_HySA_22048:HG4_PB_assemblyticsfalcon_3983:HG4_PB_HySA_17631:HG4_Ill_svaba_15182:HG4_Ill_scalpel_11149:HG4_Ill_manta_2879:HG4_Ill_Krunchall_16764:HG4_Ill_GATKHC_19422:HG4_Ill_GATKHCSBGrefine_8374:HG4_Ill_250bpfermikitraw_16034:HG4_Ill_150bpfermikitraw_15408:HG3_PB_assemblyticsfalcon_4075:HG3_Ill_svaba_15289:HG3_Ill_scalpel_11656:HG3_Ill_manta_2760:HG3_Ill_Krunchall_16200:HG3_Ill_GATKHC_19321:HG3_Ill_GATKHCSBGrefine_8051:HG3_Ill_250bpfermikitraw_15740:HG3_Ill_150bpfermikitraw_15260:HG2_PB_assemblyticsfalcon_4087:HG2_PB_assemblyticsPBcR_3934:HG2_Ill_svaba_15138:HG2_Ill_scalpel_11466:HG2_Ill_manta_3384:HG2_Ill_SpiralSDKrefine_2566:HG2_Ill_Krunchall_16520:HG2_Ill_GATKHC_19457:HG2_Ill_GATKHCSBGrefine_8160:HG2_Ill_250bpfermikitraw_16192:HG2_Ill_150bpfermikitraw_15256;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15256:HG2_Ill_250bpfermikitraw_16192:HG2_Ill_GATKHCSBGrefine_8160:HG2_Ill_GATKHC_19457:HG2_Ill_Krunchall_16520:HG2_Ill_SpiralSDKrefine_2566:HG2_Ill_manta_3384:HG2_Ill_scalpel_11466:HG2_Ill_svaba_15138:HG2_PB_assemblyticsPBcR_3934:HG2_PB_assemblyticsfalcon_4087:HG3_Ill_150bpfermikitraw_15260:HG3_Ill_250bpfermikitraw_15740:HG3_Ill_GATKHCSBGrefine_8051:HG3_Ill_GATKHC_19321:HG3_Ill_Krunchall_16200:HG3_Ill_manta_2760:HG3_Ill_scalpel_11656:HG3_Ill_svaba_15289:HG3_PB_assemblyticsfalcon_4075:HG4_Ill_150bpfermikitraw_15408:HG4_Ill_250bpfermikitraw_16034:HG4_Ill_GATKHCSBGrefine_8374:HG4_Ill_GATKHC_19422:HG4_Ill_Krunchall_16764:HG4_Ill_manta_2879:HG4_Ill_scalpel_11149:HG4_Ill_svaba_15182:HG4_PB_HySA_17631:HG4_PB_assemblyticsfalcon_3983;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.037037;PBcalls=10;Illcalls=28;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=7037;DistForward=12165;DistMin=7037;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=61;REFWIDENED=11:25680022-25680136;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=580.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:66:1/1:1:28:1:13:1/1:0:17:0:13:1/1:0:49:./.:.:.:.:.:.
chr11	25772979	HG2_PB_SVrefine2Falcon2Bionano_5903	CTGTGTTCCTGGATTTTGAAGTGTTGCCTTCACATGTGCTTCTATTCCTCCTATATATGTAGCATGGATCTAATAAGTATTTCTGTCTCTCTCTCTCTTGGGATAGTAATGTCCTTTTCCCCCTCCCCGAGCTGCAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8517:HG4_PB_assemblyticsfalcon_3984:HG2_PB_assemblyticsfalcon_4088:HG2_PB_assemblyticsPBcR_3936:HG4_PB_SVrefine2Falcon1Dovetail_7402:HG3_PB_pbsv_11855:HG3_Ill_Krunchall_16203:HG4_Ill_Krunchall_16767:HG2_Ill_Krunchall_16522:HG2_PB_HySA_22051:HG4_PB_pbsv_12148:HG4_PB_HySA_17634:HG2_PB_pbsv_12179:HG4_PB_SVrefine2PBcRDovetail_6111:HG4_Ill_svaba_15183:HG4_Ill_SVrefine2DISCOVARDovetail_8626:HG3_Ill_svaba_15290:HG3_Ill_SVrefine2DISCOVARDovetail_8849:HG2_PB_SVrefine2PBcRplusDovetail_1716:HG2_PB_SVrefine2PB10Xhap12_8783:HG2_PB_SVrefine2Falcon2Bionano_5903:HG2_PB_SVrefine2Falcon1plusDovetail_1806:HG2_Ill_svaba_15139:HG2_Ill_SpiralSDKrefine_2568:HG2_Ill_SVrefine2DISCOVARplusDovetail_1985;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8517:HG4_PB_SVrefine2PBcRDovetail_6111:HG4_Ill_svaba_15183:HG4_Ill_SVrefine2DISCOVARDovetail_8626:HG3_Ill_svaba_15290:HG3_Ill_SVrefine2DISCOVARDovetail_8849:HG2_PB_SVrefine2PBcRplusDovetail_1716:HG2_PB_SVrefine2PB10Xhap12_8783:HG2_PB_SVrefine2Falcon2Bionano_5903:HG2_PB_SVrefine2Falcon1plusDovetail_1806:HG2_Ill_svaba_15139:HG2_Ill_SpiralSDKrefine_2568:HG2_Ill_SVrefine2DISCOVARplusDovetail_1985;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0294118;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0442804;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-136;DistBack=45014;DistForward=347;DistMin=347;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=140;REFWIDENED=11:25772980-25773255;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=581.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:54:1/1:4:25:3:25:1/1:0:10:0:12:1/1:0:22:./.:.:.:.:.:.
chr11	26149287	HG2_PB_assemblyticsfalcon_4091	GCTCTTGCTGTCTCTCTCAATCTCTCTCCGTCCCTCCCTCCCTCTTTCATTCTTTTATTTTTATTTATTTATTTATTTATTTTTATTTTTCAGGGTCTTGTCATTGCTCTGTTGCCCAGCCTGGAGAACAGTGGCATGATTATAGT	CTCA	20	PASS	ClusterIDs=HG3_PB_pbsv_11858:HG3_Ill_svaba_15299:HG3_Ill_scalpel_11664:HG3_Ill_GATKHCSBGrefine_8054:HG2_Ill_svaba_15149:HG2_Ill_scalpel_11475:HG2_Ill_GATKHCSBGrefine_8162:HG2_Ill_SpiralSDKrefine_2574:HG3_PB_assemblyticsfalcon_4082:HG3_PB_SVrefine2Falcon1Dovetail_7376:HG3_Ill_manta_2762:HG3_Ill_SVrefine2DISCOVARDovetail_8850:HG2_PB_assemblyticsfalcon_4091:HG2_PB_assemblyticsPBcR_3943:HG2_PB_SVrefine2PBcRplusDovetail_1717:HG2_PB_SVrefine2PB10Xhap12_8784:HG2_PB_SVrefine2Falcon2Bionano_5905:HG2_PB_SVrefine2Falcon1plusDovetail_1807:HG2_PB_PB10Xdip_5398:HG2_PB_PB10Xdip_5397:HG2_Ill_manta_3386:HG2_10X_SVrefine210Xhap12_8518:HG3_Ill_Spiral_12641:HG2_Ill_Spiral_835:HG2_PB_HySA_22061:HG3_PB_HySA_18269:HG3_10X_allpass_2393:HG3_Ill_Krunchall_16211:HG2_PB_pbsv_12182;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8518:HG2_Ill_manta_3386:HG2_PB_PB10Xdip_5397:HG2_PB_PB10Xdip_5398:HG2_PB_SVrefine2Falcon1plusDovetail_1807:HG2_PB_SVrefine2Falcon2Bionano_5905:HG2_PB_SVrefine2PB10Xhap12_8784:HG2_PB_SVrefine2PBcRplusDovetail_1717:HG2_PB_assemblyticsPBcR_3943:HG2_PB_assemblyticsfalcon_4091:HG3_Ill_SVrefine2DISCOVARDovetail_8850:HG3_Ill_manta_2762:HG3_PB_SVrefine2Falcon1Dovetail_7376:HG3_PB_assemblyticsfalcon_4082;NumExactMatchSVs=14;ClusterMaxShiftDist=0.151625;ClusterMaxSizeDiff=0.151625;ClusterMaxEditDist=0.151625;PBcalls=14;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-142;DistBack=-1;DistForward=24422;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:26149287-26149432;PctSeqSimilarity=0.9861;PctSizeSimilarity=0.993;PctRecOverlap=0.9726;SizeDiff=1;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=98;MatchId=582.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:31:0|1:21:2:0:18:0|1:38:0:0:18:0/1:31:11:./.:.:.:.:.:.
chr11	26311127	HG2_Ill_GATKHC_19473	CCTATATGTGTGTATATGTACATATACACACATATATTCTATATGTGTGTATATGTACATATACACACATATATTCTATATGTGTGTATATGTACATATACACACATATATTCTATATGTGTAT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_12184:HG4_Ill_svaba_15194:HG2_Ill_svaba_15151:HG3_PB_HySA_18273:HG3_Ill_GATKHCSBGrefine_8055:HG2_Ill_GATKHC_19473:HG2_Ill_GATKHCSBGrefine_8163:HG4_Ill_svaba_15193:HG2_10X_SVrefine210Xhap12_8519:HG3_Ill_Krunchall_16218:HG3_Ill_manta_2763:HG2_Ill_manta_3387:HG3_Ill_SVrefine2DISCOVARDovetail_8851:HG3_Ill_Krunchall_16217:HG4_Ill_GATKHC_19433:HG3_PB_pbsv_11860;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8163:HG2_Ill_GATKHC_19473:HG3_Ill_GATKHCSBGrefine_8055;NumExactMatchSVs=3;ClusterMaxShiftDist=0.183333;ClusterMaxSizeDiff=0.183333;ClusterMaxEditDist=0.183333;PBcalls=3;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=-123;DistBack=-75;DistForward=-76;DistMin=-76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=42;REFWIDENED=11:26311086-26311231;PctSeqSimilarity=0.9541;PctSizeSimilarity=0.9609;PctRecOverlap=0.9457;SizeDiff=-5;StartDistance=7;EndDistance=2;GTMatch=0;TruScore=95;MatchId=583.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:17:0|1:19:4:0:21:./.:27:2:6:14:0/1:39:30:./.:.:.:.:.:.
chr11	26405044	HG2_PB_assemblyticsfalcon_4094	TAGATTGACTGTCCTAGGAGATGACAGCAATATATATAATGGCTTACCCTATCCTAAATGACTTTA	T	20	PASS	ClusterIDs=HG2_Ill_Cortex_1325:HG3_PB_HySA_18275:HG2_PB_HySA_22064:HG4_PB_assemblyticsfalcon_3992:HG3_PB_pbsv_11861:HG3_PB_assemblyticsfalcon_4085:HG3_Ill_svaba_15304:HG3_Ill_manta_2764:HG3_Ill_Krunchall_16221:HG3_Ill_GATKHC_19338:HG3_Ill_GATKHCSBGrefine_8056:HG3_Ill_250bpfermikitraw_15753:HG3_Ill_150bpfermikitraw_15276:HG3_10X_allpass_2394:HG2_PB_assemblyticsfalcon_4094:HG2_PB_assemblyticsPBcR_3947:HG2_Ill_svaba_15153:HG2_Ill_SpiralSDKrefine_2577:HG2_Ill_Krunchall_16535:HG2_Ill_GATKHC_19474:HG2_Ill_GATKHCSBGrefine_8164:HG2_Ill_250bpfermikitraw_16205:HG2_Ill_150bpfermikitraw_15270:HG2_10X_allpass_1968:HG2_PB_pbsv_12185:HG3_Ill_Cortex_592;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_1968:HG2_Ill_150bpfermikitraw_15270:HG2_Ill_250bpfermikitraw_16205:HG2_Ill_GATKHCSBGrefine_8164:HG2_Ill_GATKHC_19474:HG2_Ill_Krunchall_16535:HG2_Ill_SpiralSDKrefine_2577:HG2_Ill_svaba_15153:HG2_PB_assemblyticsPBcR_3947:HG2_PB_assemblyticsfalcon_4094:HG3_10X_allpass_2394:HG3_Ill_150bpfermikitraw_15276:HG3_Ill_250bpfermikitraw_15753:HG3_Ill_GATKHCSBGrefine_8056:HG3_Ill_GATKHC_19338:HG3_Ill_Krunchall_16221:HG3_Ill_manta_2764:HG3_Ill_svaba_15304:HG3_PB_assemblyticsfalcon_4085:HG3_PB_pbsv_11861:HG4_PB_assemblyticsfalcon_3992;NumExactMatchSVs=21;ClusterMaxShiftDist=0.09375;ClusterMaxSizeDiff=0.09375;ClusterMaxEditDist=0.109375;PBcalls=8;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-65;DistBack=17520;DistForward=13389;DistMin=13389;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=11:26405043-26405110;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=584.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:36:./.:17:26:12:13:0|1:53:1:0:33:0/1:30:9:./.:.:.:.:.:.
chr11	26679948	HG3_PB_assemblyticsfalcon_4092	GTCAGGAGTTCAAGAGCAAAGAGCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAATAGCCGGGTGCAGTGGCGCATGCCTGTAATCCCAGCTAC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_12155:HG3_Ill_Krunchall_16228:HG3_Ill_Krunchall_16227:HG4_PB_HySA_17642:HG2_PB_HySA_22073:HG4_PB_assemblyticsfalcon_3999:HG4_PB_SVrefine2PBcRDovetail_6113:HG4_PB_SVrefine2Falcon1Dovetail_7407:HG4_Ill_svaba_15199:HG4_Ill_scalpel_11162:HG4_Ill_manta_2884:HG4_Ill_SVrefine2DISCOVARDovetail_8630:HG4_Ill_Krunchall_16779:HG4_Ill_GATKHC_19442:HG4_Ill_GATKHCSBGrefine_8380:HG4_Ill_250bpfermikitraw_16049:HG4_Ill_150bpfermikitraw_15422:HG4_CG_vcfBeta_7741:HG3_PB_pbsv_11865:HG3_PB_assemblyticsfalcon_4092:HG3_PB_SVrefine2Falcon1Dovetail_7380:HG3_Ill_svaba_15309:HG3_Ill_scalpel_11668:HG3_Ill_SVrefine2DISCOVARDovetail_8853:HG3_Ill_Krunchall_16226:HG3_Ill_GATKHC_19344:HG3_Ill_GATKHCSBGrefine_8057:HG3_Ill_250bpfermikitraw_15757:HG3_Ill_150bpfermikitraw_15281:HG3_10X_allpass_2395:HG2_PB_pbsv_12189:HG2_PB_assemblyticsfalcon_4101:HG2_PB_assemblyticsPBcR_3952:HG2_PB_SVrefine2PBcRplusDovetail_1720:HG2_PB_SVrefine2PB10Xhap12_8788:HG2_PB_SVrefine2Falcon2Bionano_5907:HG2_PB_SVrefine2Falcon1plusDovetail_1811:HG2_Ill_svaba_15158:HG2_Ill_scalpel_11480:HG2_Ill_manta_3390:HG2_Ill_SpiralSDKrefine_2579:HG2_Ill_SVrefine2DISCOVARplusDovetail_1989:HG2_Ill_Krunchall_16539:HG2_Ill_GATKHC_19479:HG2_Ill_GATKHCSBGrefine_8172:HG2_Ill_250bpfermikitraw_16211:HG2_Ill_150bpfermikitraw_15275:HG2_10X_SVrefine210Xhap12_8521:HG4_Ill_Spiral_970;NumClusterSVs=49;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8521:HG2_Ill_150bpfermikitraw_15275:HG2_Ill_250bpfermikitraw_16211:HG2_Ill_GATKHCSBGrefine_8172:HG2_Ill_GATKHC_19479:HG2_Ill_Krunchall_16539:HG2_Ill_SVrefine2DISCOVARplusDovetail_1989:HG2_Ill_SpiralSDKrefine_2579:HG2_Ill_manta_3390:HG2_Ill_scalpel_11480:HG2_Ill_svaba_15158:HG2_PB_SVrefine2Falcon1plusDovetail_1811:HG2_PB_SVrefine2Falcon2Bionano_5907:HG2_PB_SVrefine2PB10Xhap12_8788:HG2_PB_SVrefine2PBcRplusDovetail_1720:HG2_PB_assemblyticsPBcR_3952:HG2_PB_assemblyticsfalcon_4101:HG2_PB_pbsv_12189:HG3_10X_allpass_2395:HG3_Ill_150bpfermikitraw_15281:HG3_Ill_250bpfermikitraw_15757:HG3_Ill_GATKHCSBGrefine_8057:HG3_Ill_GATKHC_19344:HG3_Ill_Krunchall_16226:HG3_Ill_SVrefine2DISCOVARDovetail_8853:HG3_Ill_scalpel_11668:HG3_Ill_svaba_15309:HG3_PB_SVrefine2Falcon1Dovetail_7380:HG3_PB_assemblyticsfalcon_4092:HG3_PB_pbsv_11865:HG4_CG_vcfBeta_7741:HG4_Ill_150bpfermikitraw_15422:HG4_Ill_250bpfermikitraw_16049:HG4_Ill_GATKHCSBGrefine_8380:HG4_Ill_GATKHC_19442:HG4_Ill_Krunchall_16779:HG4_Ill_SVrefine2DISCOVARDovetail_8630:HG4_Ill_manta_2884:HG4_Ill_scalpel_11162:HG4_Ill_svaba_15199:HG4_PB_SVrefine2Falcon1Dovetail_7407:HG4_PB_SVrefine2PBcRDovetail_6113:HG4_PB_assemblyticsfalcon_3999;NumExactMatchSVs=43;ClusterMaxShiftDist=0.02;ClusterMaxSizeDiff=0.02;ClusterMaxEditDist=0.0502513;PBcalls=16;Illcalls=30;TenXcalls=2;CGcalls=1;PBexactcalls=13;Illexactcalls=27;TenXexactcalls=2;CGexactcalls=1;HG2count=19;HG3count=14;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-99;DistBack=276;DistForward=10686;DistMin=276;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=11:26679949-26680054;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=585.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:./.:6:14:1:11:1/1:0:19:0:16:1/1:0:51:./.:.:.:.:.:.
chr11	27307869	HG4_Ill_GATKHCSBGrefine_8382	TATTGTGTTCTGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_12653:HG2_PB_assemblyticsfalcon_4105:HG2_PB_assemblyticsPBcR_3958:HG4_Ill_Krunchall_16793:HG3_Ill_Krunchall_16238:HG2_Ill_Krunchall_16547:HG4_PB_assemblyticsfalcon_4005:HG3_PB_assemblyticsfalcon_4098:HG3_PB_HySA_18286:HG2_PB_HySA_22080:HG2_PB_pbsv_12192:HG4_PB_pbsv_12158:HG3_Ill_MetaSV_792:HG2_Ill_tnscope_1353:HG4_PB_SVrefine2PBcRDovetail_6115:HG4_PB_SVrefine2Falcon1Dovetail_7409:HG4_PB_HySA_17651:HG4_Ill_scalpel_11171:HG4_Ill_manta_2885:HG4_Ill_SVrefine2DISCOVARDovetail_8633:HG4_Ill_Krunchall_16792:HG4_Ill_GATKHCSBGrefine_8382:HG4_10X_allpass_2303:HG3_PB_pbsv_11867:HG3_PB_SVrefine2Falcon1Dovetail_7383:HG3_Ill_scalpel_11677:HG3_Ill_manta_2765:HG3_Ill_SVrefine2DISCOVARDovetail_8856:HG3_Ill_Krunchall_16237:HG3_Ill_GATKHCSBGrefine_8058:HG3_10X_allpass_2396:HG2_PB_SVrefine2PBcRplusDovetail_1722:HG2_PB_SVrefine2PB10Xhap12_8790:HG2_PB_SVrefine2Falcon2Bionano_5911:HG2_PB_SVrefine2Falcon1plusDovetail_1814:HG2_Ill_scalpel_11486:HG2_Ill_manta_3391:HG2_Ill_breakscan11_1759:HG2_Ill_SVrefine2DISCOVARplusDovetail_1991:HG2_Ill_Krunchall_16546:HG2_Ill_GATKHCSBGrefine_8174:HG2_10X_allpass_1969:HG2_10X_SVrefine210Xhap12_8524;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8524:HG2_10X_allpass_1969:HG2_Ill_GATKHCSBGrefine_8174:HG2_Ill_Krunchall_16546:HG2_Ill_SVrefine2DISCOVARplusDovetail_1991:HG2_Ill_breakscan11_1759:HG2_Ill_manta_3391:HG2_Ill_scalpel_11486:HG2_PB_SVrefine2Falcon1plusDovetail_1814:HG2_PB_SVrefine2Falcon2Bionano_5911:HG2_PB_SVrefine2PB10Xhap12_8790:HG2_PB_SVrefine2PBcRplusDovetail_1722:HG3_10X_allpass_2396:HG3_Ill_GATKHCSBGrefine_8058:HG3_Ill_Krunchall_16237:HG3_Ill_SVrefine2DISCOVARDovetail_8856:HG3_Ill_manta_2765:HG3_Ill_scalpel_11677:HG3_PB_SVrefine2Falcon1Dovetail_7383:HG3_PB_pbsv_11867:HG4_10X_allpass_2303:HG4_Ill_GATKHCSBGrefine_8382:HG4_Ill_Krunchall_16792:HG4_Ill_SVrefine2DISCOVARDovetail_8633:HG4_Ill_manta_2885:HG4_Ill_scalpel_11171:HG4_PB_HySA_17651:HG4_PB_SVrefine2Falcon1Dovetail_7409:HG4_PB_SVrefine2PBcRDovetail_6115;NumExactMatchSVs=29;ClusterMaxShiftDist=0.101227;ClusterMaxSizeDiff=0.101227;ClusterMaxEditDist=0.101227;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=50347;DistForward=22120;DistMin=22120;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=11:27307870-27308219;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=586.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:1/1:1:27:0:25:1/1:0:17:0:21:1/1:0:30:./.:2:16:.:.:.
chr11	27657263	HG4_Ill_GATKHCSBGrefine_8386	GAGGATTGCTGTTTTTCACAGTTGAATGCAAAGGCTTTTATAGGAAACTGATGAGGGCTGGGCATTTTGTTTGCATAAGGCATGTTTTTCTGGTAGCTCCACCCCATCCTCCTAAGGTGCATGTGGGCCCTTAGCTTGAGTTACCCATATTGCTTTGTTGCCCTTATTATGCATGTGTCAGGGGATGAAATTTTCCACTGCTGGCATGTCTGGGCAAGTCACCTGTGTAGCCTTTCTTATCTGTGCAGCTGTGGGCATGTCTTAGGCAAGTCCCCCAGTGTAAGTTCCCTTATCTGTGCCTGCAGGCTGTTCTTTTGTTTCTAAAAATTCAAT	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_16551:HG4_PB_SVrefine2PBcRDovetail_6117:HG3_Ill_MetaSV_793:HG2_PB_HySA_22088:HG2_Ill_tnscope_1354:HG4_PB_pbsv_12161:HG4_PB_assemblyticsfalcon_4012:HG4_PB_SVrefine2Falcon1Dovetail_7411:HG4_Ill_scalpel_11174:HG4_Ill_manta_2886:HG4_Ill_SVrefine2DISCOVARDovetail_8635:HG4_Ill_GATKHCSBGrefine_8386:HG4_10X_allpass_2304:HG3_PB_pbsv_11869:HG3_PB_assemblyticsfalcon_4104:HG3_PB_SVrefine2Falcon1Dovetail_7384:HG3_Ill_manta_2766:HG3_Ill_GATKHCSBGrefine_8064:HG3_10X_allpass_2397:HG2_PB_pbsv_12194:HG2_PB_SVrefine2PBcRplusDovetail_1724:HG2_PB_SVrefine2PB10Xhap12_8793:HG2_PB_SVrefine2Falcon2Bionano_5913:HG2_PB_SVrefine2Falcon1plusDovetail_1816:HG2_Ill_scalpel_11489:HG2_Ill_manta_3392:HG2_Ill_SpiralSDKrefine_2586:HG2_Ill_SVrefine2DISCOVARplusDovetail_1993:HG2_Ill_GATKHCSBGrefine_8176:HG2_10X_allpass_1970:HG2_10X_SVrefine210Xhap12_8525:HG2_Ill_breakscan11_1760:HG2_PB_assemblyticsfalcon_4111:HG2_PB_assemblyticsPBcR_3964:HG4_Ill_Krunchall_16799:HG3_Ill_Krunchall_16241;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8525:HG2_10X_allpass_1970:HG2_Ill_GATKHCSBGrefine_8176:HG2_Ill_SVrefine2DISCOVARplusDovetail_1993:HG2_Ill_SpiralSDKrefine_2586:HG2_Ill_manta_3392:HG2_Ill_scalpel_11489:HG2_PB_SVrefine2Falcon1plusDovetail_1816:HG2_PB_SVrefine2Falcon2Bionano_5913:HG2_PB_SVrefine2PB10Xhap12_8793:HG2_PB_SVrefine2PBcRplusDovetail_1724:HG2_PB_pbsv_12194:HG3_10X_allpass_2397:HG3_Ill_GATKHCSBGrefine_8064:HG3_Ill_manta_2766:HG3_PB_SVrefine2Falcon1Dovetail_7384:HG3_PB_assemblyticsfalcon_4104:HG3_PB_pbsv_11869:HG4_10X_allpass_2304:HG4_Ill_GATKHCSBGrefine_8386:HG4_Ill_SVrefine2DISCOVARDovetail_8635:HG4_Ill_manta_2886:HG4_Ill_scalpel_11174:HG4_PB_SVrefine2Falcon1Dovetail_7411:HG4_PB_assemblyticsfalcon_4012:HG4_PB_pbsv_12161;NumExactMatchSVs=26;ClusterMaxShiftDist=0.00600601;ClusterMaxSizeDiff=0.00600601;ClusterMaxEditDist=0.00900901;PBcalls=15;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=67433;DistForward=4414;DistMin=4414;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=11:27657264-27657595;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:./.:0:12:0:4:1/1:0:9:0:14:1/1:0:29:./.:2:4:.:.:.
chr11	29967578	HG3_Ill_SVrefine2DISCOVARDovetail_8865	GTGACTCTACAATCACCGGCTTCTCTTTTAGGCTCCTCTGCACCATCCCTGACCAAGGAGCATGAAATTTCACAATATGATAGTCTCTCCATAGCTTAAAACCTGGAGAAAAAATTTGCAAATTATAGTTCAGTAGCCGTATTAATCACAGTTAACCTTAATTAAGCATTTAGTATATGTCAATGTGCTAAGTGTTTGACATCATTACCTAGCTTATCCTTACTACAACCTTGTGGGTAAAAACTATCATTACACTCACTTTACAGATGAAATTAAGTTCAGAGAGTCTAAGTAATTTATTCAGATTCAAGAATTAGGACTTGAGCCCAGGACTGCCCTGCTGAATTATTGATAGTTTTCTGACTTTGATACTTGTTTTTACCCATCTACTTGGCCACTGAGCACTTTTCTCTGGAGATGCCAATAAAGCACATAATGACTCAAATGTCTATTCTTTTTTAAAATATAGCTTTGCACATAATTTAAAAAATTTGTAACAGTAATTTAACAGTGTAACAAATGTCTTATTTGTAACAGCAAGCAAAAATATAAAGTGGCTCAATGTAAACTACTTTTAACATATGCAGTAACTATAAAAAAGCCATAAAATGTTCCATAAAGTTTGGGATCATAAAGGAATACAGAAAAAGAGAGGCAATCTTCCTAGATAAGAATGACTCAATTTTGAAAAGATGAGGCTTTTTCCAAATTAAGGAAGTATTTAACTCAATTCTCAACAAAAGGTCAATAAGATTAGCCAGAAAGAAACTAAAAGGAAGATCTAAAAGTTCACTTGCTAGAAATAAACTAATTAAAATGAATTCAAAACATTTTTCCAAGAAAATTGAGCAGGTAAATATGCAAAACATACTACAAAGCTACAACATTC	G	20	PASS	ClusterIDs=HG2_PB_pbsv_12200:HG3_PB_pbsv_11876:HG2_10X_allpass_1972:HG3_10X_allpass_2399:HG2_Ill_tnscope_1355:HG4_PB_assemblyticsfalcon_4033:HG4_PB_SVrefine2Falcon1Dovetail_7415:HG3_Ill_manta_2770:HG3_Ill_SVrefine2DISCOVARDovetail_8865:HG3_Ill_GATKHCSBGrefine_8069:HG2_PB_SVrefine2PB10Xhap12_8798:HG2_PB_SVrefine2Falcon1plusDovetail_1818:HG2_Ill_manta_3395:HG2_Ill_breakscan11_1761:HG2_Ill_SpiralSDKrefine_2596:HG2_Ill_SVrefine2DISCOVARplusDovetail_2001:HG2_Ill_GATKHCSBGrefine_8179:HG2_PB_assemblyticsfalcon_4130:HG3_Ill_MetaSV_795;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8179:HG2_Ill_SVrefine2DISCOVARplusDovetail_2001:HG2_Ill_SpiralSDKrefine_2596:HG2_Ill_breakscan11_1761:HG2_Ill_manta_3395:HG2_PB_SVrefine2Falcon1plusDovetail_1818:HG2_PB_SVrefine2PB10Xhap12_8798:HG3_Ill_GATKHCSBGrefine_8069:HG3_Ill_SVrefine2DISCOVARDovetail_8865:HG3_Ill_manta_2770:HG4_PB_SVrefine2Falcon1Dovetail_7415:HG4_PB_assemblyticsfalcon_4033;NumExactMatchSVs=12;ClusterMaxShiftDist=0.010118;ClusterMaxSizeDiff=0.010118;ClusterMaxEditDist=0.010118;PBcalls=7;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-888;DistBack=6986;DistForward=-888;DistMin=-888;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:29967579-29968467;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=588.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:22:./.:9:12:9:4:1|0:0:24:74:0:0/1:41:15:0/1:52:28:.:.:.
chr11	31152431	HG3_PB_pbsv_11881	TAAAGAAAACAAAATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_18320:HG3_Ill_Krunchall_16270:HG2_Ill_Krunchall_16583:HG2_PB_pbsv_12205:HG3_Ill_MetaSV_797:HG2_Ill_tnscope_1356:HG4_PB_assemblyticsfalcon_4039:HG4_Ill_scalpel_11194:HG4_Ill_manta_2888:HG4_Ill_SVrefine2DISCOVARDovetail_8646:HG4_Ill_GATKHCSBGrefine_8411:HG4_10X_allpass_2306:HG3_PB_pbsv_11881:HG3_PB_assemblyticsfalcon_4133:HG3_Ill_GATKHCSBGrefine_8073:HG3_10X_allpass_2400:HG2_PB_assemblyticsfalcon_4139:HG2_Ill_scalpel_11516:HG2_Ill_manta_3397:HG2_Ill_SVrefine2DISCOVARplusDovetail_2006:HG2_Ill_GATKHCSBGrefine_8183:HG2_10X_SVrefine210Xhap12_8530:HG4_PB_pbsv_12172;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8530:HG2_Ill_GATKHCSBGrefine_8183:HG2_Ill_SVrefine2DISCOVARplusDovetail_2006:HG2_Ill_manta_3397:HG2_Ill_scalpel_11516:HG2_PB_assemblyticsfalcon_4139:HG3_10X_allpass_2400:HG3_Ill_GATKHCSBGrefine_8073:HG3_PB_assemblyticsfalcon_4133:HG3_PB_pbsv_11881:HG4_10X_allpass_2306:HG4_Ill_GATKHCSBGrefine_8411:HG4_Ill_SVrefine2DISCOVARDovetail_8646:HG4_Ill_manta_2888:HG4_Ill_scalpel_11194:HG4_PB_assemblyticsfalcon_4039;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0287081;ClusterMaxSizeDiff=0.0287081;ClusterMaxEditDist=0.0288;PBcalls=7;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=-183;DistForward=-301;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=11:31152432-31152763;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:17:0|1:23:0:0:23:1|0:0:19:50:1:0/1:33:29:0/1:24:8:.:.:.
chr11	31393773	HG3_PB_SVrefine2Falcon1Dovetail_7391	GTAATTCTATACCGACGTCCGGTTAACTCAGTTTATAAAGAGTAAAGAACCATTATTTATATAGAATTTGTTGTCTCTTTAGTTTATACCAGTTACATCAGTGTTGTTTTGCCAAAACTATTAATGTTCATTGTGAGAGACTAACTGTTTCATCATCAGGATTGTACTAATATTCTTACTTTAGGTAGTATGTTGGACTAAATGACCTTAAGGTACCTTTTGCCCCAGAAGTTTTAAAGTTTCTGTCAGCAGAATCAAGTAGACTTTATTGAAAAATATCCTAATATTAAACCATCCTTGTACCTCACTCAGTTAATTGGGAAATGAACCTGGAAAAGTAGACTGGATCATTCTGGTTCTTGTAGGCCATGCTGGCCTTTAATTGGCCACTGAGAAGCAGTCTGCACATAATATGTAGTATCTGTCAAACAGCAAAGTAGGTAAATCATTTCACATATGCGCTAACAATGTATCAGAGAATTCTGGTTGCTCTACAGCTTTGCCAATATTTGATGTTATTGGTCTCTTTCATTTTGGCTATTGGAGTTTTTGCAATTTTGCCACCATTGACATTTTGGGCAGGATAATTCTTTGTTATTTCGGCTGTCCTGTGCTTTGTAAGATGTGTGGCAGGATCCTAGATGCCAGTAACAACCAAAAATGCCGCCTGCATGTCAAAATTGCCACATCCCATGAGAATCACTGGACTACTCTACAGTGTCTGGTCATACCCCATTGTGGGGTTGTTGCTTTTTTAAAATTTATCTGATGACTAATGATGTTGAGCCCTTTTTAATGTGATAATTGGCCATTTGTATAATTTTCTTTTATGAAGTGTTTTTTTTTAAATTAAATATATTCTTGATTCTGTATATATGTTGTATATATTTTCTCCTAGTCTGTGATTTACCAGGTCATTTTCTTAATGGTGTCTTTTGATGCAGAGTTTTTTGTTTTGACAAAATATAATTTATCAAATGTGTGTTTTTATAGTTAATACTTTCCATCTTCTCTAAGGTTATGAGAATATTCTTCGATGTTTTCTTCTAGAAGTGGTCATTTGCTTTTACCTTTAGACTTATGATTTCTGTGTATAGCATGAGATGTGAGGTCATGTTTTTATTTTTCCTCAGTATATTCAGTTGTGCCAGCATCATTTGTTGAAAATTTTTTTCTCCATTGGACTGTCTTGGCAATATGAGTCTATTACTGGACTCTATTCTGTTTTATATGTTGTTTATCCTTTTACTAATACCTCCATCTTGATTACTGTAGATTTATAATCAGTCTCAAAGTCATTGTAAAGTTAGTTCTCTAATATTATCCTTCTTTTCCAGTTTATTTCGGTTATTCTAGTTTGCTTATATTTCCACAGAAATTTTAGAATCAGCTTGTAAATGTCTACCAAAAAAATCTTGCTTGAGTTTTCAACTGGGATTGCAATAATAGGTATCCACTTTGGTAGAATGGCATCTTAATAATATTGAGTCTTTGAATCTATGAACATGTATCCTTCTCCTTACTTAAGCCATCTTTCATTTCTCTCGTCAGTGTTTTATAATTTTCAGTGTAGAGGTCTCACATATCTTTTCTTGAATTTATTTCTAGGTATTTGGTTTTTGGTTCCATTATAAATGGTATTTTAAAAAATAATTCATTTTTCACTTGTTGATTGATAGTATATAAAATTATAGCTTATTTTTATATACTGGTCTCTTATCCTACAATCTAGGTAAATTTGCTTTTTAATTTTCATAGCTATTTTTGTCAATTTCTTAGAATTTTCTGCCAACACAATTATGTCATTTGCAGATAACGAGAGTTTTAATTCTGTCTTACCAATCTGTATGTCTTGTATTTCCTTTTCTTACGTTAAGGCACTAGCTGGTTGCTTCTATTAAAATGTTCAGTTGAAGTGTTAAGAGCAGGTATCCTTGCCTTGTTCCTGATTTTAAGAGGAAAACCTTCAATGTTTTACCAGTAAGTATGCTGTTAGGTGTATGTTTTTAAAGATGCCCTTTATCAGCTTGGGGAAATTCTTCCAATTAATACTTTGCTAAGAGTTTTTATGGTAAGTAGGTATTTAAATTTGTTAGATCCTTTTTTTTTTTGCATTTATTGAATTTTTGCATTTATTGATTTTTCTCATTTAATTTGTTAATGTGGTGAATCACGTAGATTTTTCTTAAGTTAAACCCACTTCTCATCCCTAGGATAAACAAACCACTTATCATGAAGCATTATTATATTTATACATTGAGGGATTCTAGTTGCTATTATTTTGTCATGGATTTTTATGTTTAATTTCATGCTGTATATTTGTCTGTAATTTTCTTTTCTCGTAATGTTTATGTCTAAATTTAGTATCATAGTTATGCTAGCCCCATAAAATGAATTGTGATTTCTGGCTTTATAGTGAGGAAGAGAGGTGGAGGGCTAACCATTTTTTTAGTCTTAACCAGTCTTTCTCTTGTTTAGTTTTGCCCCTCAACTCCACTCTCAAAGGTACTTAATGCCTTCCGTTCCTCAATTTCTCCTGCCTCTGTGTGAATGAACTCACTTCTTTGTCTCTTTCACTTTAGACTTAGGTTTCAGTTTTTGCAGGTACACTGAATTTGTTATCATTTATTGATGAATTTTCCATCTCTTCAAATTTTGGTGTCTTTTGCCTGTCTTTTCTCTCCTGTTCTTTTGCCTGTTTTTTTCTCTTCTCTCCTGTTTGTTCTTACACATTTATGCCTTTTTTTAAAAAATTATTATTCCTTTTCTGTTACTATCAAGGAATTTTCAGAGGGATGAAAGTGTGAGCCAGTTGCTGTGGTTCACACTTGTAATCTTAGCTACTTGTGAGGCTGAAGCAGGAGGATTGCTTGAGCCCAGGAGTTCAAGGCTACAGTGAGATATGATTGTGTCACTGCACGCCAGCCTGGGCGACAGAGCAAGACCCTCTCTCTAATTAATTTGCCATTTAGTGGAAGCCCTGAACTATTTTCTTTTCCCTTTAGAGGCCAGATACCCTTCTGTGGCCATATGCCTTTGCACTTGCACTCTGCCCATCCACTACCTCACCTGATTCTCACTCACTGTTTCAAAATGATCTTAGTTGTAATCGTGCCTCCCCAGCTCCCTGCCATGTCTTTAGTACATTTCATGATATTTCTCTAAGACAGGGGAGGTATAGCTGTTAGATAAGGAGAATGAGGGTAGGTGGACTGTAATAAAAGGTTGAAATTTTTTCTTCTGCTTTTCTTTTAGAAGATGAGAGAGACTTGAACATGTTTACACTGTATGGGAAGTGGCCACGGAAAAGCTTGAGATTGAAGTTATAGGAGAGTTTGAATAATTAACAAAAGCAGAGAGGAATAGGATCTGAATCATAGGTAGAAGGATTAGCTTTAGGTAAGAGATAGGAGGGACCTGTCTTCATTGTTACAGGAAGGAAGGAAGGAAGAAAAGATAGTTGCAATAGCCGGTTTATTTGTAGGTTTGGTAGCGGAAAGTTGATGAGCTCTCATTTGGTACCTTCTTTTTATTCTCTGTGAAGTAGAAGACAAAGTTATCTGTTGAGAAGGGTGAGAGATGAAGTGAAGCAGCAAATTACAGGAGAGAGAATTTCAACTAGCATTATTCTGGGAAGGCTCCTTGTAGATAGCTATGTATACTATGGGAGCAAGAAGTCTCAGCTAACAACCTGGCAGCAGGCAACAAGAGACAATACATCTGATATAATTTGGCTGTGTCCCCACCTAAATCTCATCTTGAATTGTAGCTCTCATAGTTCCCATGTGTTGTGGGAGGGACCCAGTGGGAGATAATTGAATCATGGGGTGGCGAGGAGGGGGTTCCCCCATATTGTTCTCCTCATGGTAGTGAA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2008:HG3_Ill_Krunchall_16271:HG2_Ill_Krunchall_16584:HG2_PB_assemblyticsfalcon_4141:HG4_PB_assemblyticsfalcon_4040:HG2_PB_assemblyticsPBcR_3989:HG4_10X_allpass_2307:HG3_PB_assemblyticsfalcon_4134:HG3_10X_allpass_2401:HG2_10X_allpass_1973:HG2_Ill_tnscope_1357:HG4_PB_pbsv_12173:HG4_PB_SVrefine2PBcRDovetail_6125:HG4_PB_SVrefine2Falcon1Dovetail_7418:HG3_PB_pbsv_11882:HG3_PB_SVrefine2Falcon1Dovetail_7391:HG3_Ill_MetaSV_798:HG2_PB_pbsv_12207:HG2_PB_SVrefine2PBcRplusDovetail_1731:HG2_PB_SVrefine2PB10Xhap12_8801:HG2_PB_SVrefine2Falcon2Bionano_5917:HG2_PB_SVrefine2Falcon1plusDovetail_1822:HG2_Ill_SpiralSDKrefine_2609;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2008:HG4_PB_pbsv_12173:HG4_PB_SVrefine2PBcRDovetail_6125:HG4_PB_SVrefine2Falcon1Dovetail_7418:HG3_PB_pbsv_11882:HG3_PB_SVrefine2Falcon1Dovetail_7391:HG3_Ill_MetaSV_798:HG2_PB_pbsv_12207:HG2_PB_SVrefine2PBcRplusDovetail_1731:HG2_PB_SVrefine2PB10Xhap12_8801:HG2_PB_SVrefine2Falcon2Bionano_5917:HG2_PB_SVrefine2Falcon1plusDovetail_1822:HG2_Ill_SpiralSDKrefine_2609;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00335787;ClusterMaxSizeDiff=0.00335787;ClusterMaxEditDist=0.00335787;PBcalls=14;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-3873;DistBack=411;DistForward=-3873;DistMin=-3873;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=11:31393774-31397653;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=590.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:58:0|1:44:1:0:33:0|1:71:0:0:25:0/1:39:15:0/1:289:139:3922:.:.
chr11	32286640	HG2_Ill_manta_3399	TAAGAAAAGGTCTTCGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_22116:HG3_PB_assemblyticsfalcon_4140:HG4_Ill_Krunchall_16833:HG3_Ill_Krunchall_16280:HG3_Ill_Spiral_12687:HG2_Ill_Spiral_837:HG2_PB_pbsv_12209:HG3_Ill_MetaSV_800:HG2_Ill_tnscope_1358:HG4_PB_assemblyticsfalcon_4046:HG4_PB_SVrefine2PBcRDovetail_6127:HG4_PB_SVrefine2Falcon1Dovetail_7420:HG4_Ill_GATKHCSBGrefine_8415:HG4_10X_allpass_2308:HG3_PB_pbsv_11884:HG3_PB_SVrefine2PBcRDovetail_5675:HG3_PB_SVrefine2Falcon1Dovetail_7392:HG3_Ill_scalpel_11707:HG3_Ill_SVrefine2DISCOVARDovetail_8872:HG3_Ill_GATKHCSBGrefine_8077:HG3_10X_allpass_2404:HG2_PB_SVrefine2PB10Xhap12_8802:HG2_PB_SVrefine2Falcon1plusDovetail_1823:HG2_Ill_manta_3399:HG2_Ill_breakscan11_1762:HG2_Ill_GATKHCSBGrefine_8187:HG2_10X_allpass_1974:HG2_10X_SVrefine210Xhap12_8533:HG4_PB_pbsv_12175:HG4_Ill_Spiral_971;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8533:HG2_10X_allpass_1974:HG2_Ill_GATKHCSBGrefine_8187:HG2_Ill_breakscan11_1762:HG2_Ill_manta_3399:HG2_PB_SVrefine2Falcon1plusDovetail_1823:HG2_PB_SVrefine2PB10Xhap12_8802:HG3_10X_allpass_2404:HG3_Ill_GATKHCSBGrefine_8077:HG3_Ill_SVrefine2DISCOVARDovetail_8872:HG3_Ill_scalpel_11707:HG3_PB_SVrefine2Falcon1Dovetail_7392:HG3_PB_SVrefine2PBcRDovetail_5675:HG3_PB_pbsv_11884:HG4_10X_allpass_2308:HG4_Ill_GATKHCSBGrefine_8415:HG4_PB_SVrefine2Falcon1Dovetail_7420:HG4_PB_SVrefine2PBcRDovetail_6127:HG4_PB_assemblyticsfalcon_4046;NumExactMatchSVs=19;ClusterMaxShiftDist=0.124814;ClusterMaxSizeDiff=0.124814;ClusterMaxEditDist=0.124814;PBcalls=12;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=-314;DistForward=-333;DistMin=-333;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=11:32286641-32286986;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:15:0|1:19:2:0:13:1|0:0:24:49:0:0/1:16:22:0/1:26:7:.:.:.
chr11	33384443	HG4_Ill_Krunchall_16848	CCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8537:HG3_PB_HySA_18341:HG4_Ill_svaba_15247:HG4_Ill_Krunchall_16849:HG4_Ill_GATKHC_19505:HG4_Ill_GATKHCSBGrefine_8427:HG4_Ill_150bpfermikitraw_15480:HG4_Ill_svaba_15246:HG4_Ill_Krunchall_16848:HG4_Ill_GATKHC_19504:HG4_Ill_GATKHCSBGrefine_8426:HG4_Ill_250bpfermikitraw_16108:HG4_Ill_150bpfermikitraw_15479:HG2_Ill_manta_3401:HG2_Ill_Krunchall_16602:HG2_Ill_GATKHC_19548:HG2_Ill_GATKHCSBGrefine_8194:HG2_Ill_250bpfermikitraw_16270:HG2_Ill_150bpfermikitraw_15331:HG4_PB_assemblyticsfalcon_4062:HG3_PB_assemblyticsfalcon_4155:HG3_Ill_Krunchall_16287:HG3_Ill_GATKHC_19403:HG3_Ill_GATKHCSBGrefine_8082:HG3_Ill_250bpfermikitraw_15819:HG3_Ill_150bpfermikitraw_15338:HG3_PB_pbsv_11888:HG4_Ill_SVrefine2DISCOVARDovetail_8654:HG2_Ill_SVrefine2DISCOVARplusDovetail_2016;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15331:HG2_Ill_250bpfermikitraw_16270:HG2_Ill_GATKHCSBGrefine_8194:HG2_Ill_GATKHC_19548:HG2_Ill_Krunchall_16602:HG2_Ill_manta_3401:HG4_Ill_150bpfermikitraw_15479:HG4_Ill_250bpfermikitraw_16108:HG4_Ill_GATKHCSBGrefine_8426:HG4_Ill_GATKHC_19504:HG4_Ill_Krunchall_16848:HG4_Ill_svaba_15246;NumExactMatchSVs=12;ClusterMaxShiftDist=0.209524;ClusterMaxSizeDiff=0.209524;ClusterMaxEditDist=0.209524;PBcalls=4;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=13;NumTechs=3;NumTechsExact=1;SVLEN=-54;DistBack=44685;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=151;REFWIDENED=11:33384391-33384595;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:16:./.:31:8:5:10:./.:16:1:1:14:0/1:22:18:./.:.:.:.:.:.
chr11	33537672	HG4_10X_allpass_2310	GCTGGAGGTGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCTCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1763:HG3_PB_HySA_18345:HG4_Ill_Krunchall_16851:HG3_Ill_Krunchall_16290:HG2_Ill_Krunchall_16603:HG4_PB_assemblyticsfalcon_4064:HG3_PB_assemblyticsfalcon_4157:HG2_PB_assemblyticsfalcon_4161:HG2_PB_assemblyticsPBcR_4006:HG4_Ill_Spiral_972:HG2_PB_HySA_22136:HG3_Ill_MetaSV_803:HG2_Ill_tnscope_1359:HG4_PB_pbsv_12187:HG4_PB_SVrefine2PBcRDovetail_6134:HG4_PB_SVrefine2Falcon1Dovetail_7429:HG4_Ill_scalpel_11210:HG4_Ill_manta_2892:HG4_Ill_SVrefine2DISCOVARDovetail_8656:HG4_Ill_GATKHCSBGrefine_8429:HG4_10X_allpass_2310:HG3_PB_pbsv_11890:HG3_PB_SVrefine2PBcRDovetail_5680:HG3_PB_SVrefine2Falcon1Dovetail_7401:HG3_Ill_scalpel_11715:HG3_Ill_manta_2775:HG3_Ill_SVrefine2DISCOVARDovetail_8879:HG3_Ill_GATKHCSBGrefine_8084:HG3_10X_allpass_2405:HG2_PB_pbsv_12219:HG2_PB_SVrefine2PBcRplusDovetail_1739:HG2_PB_SVrefine2PB10Xhap12_8809:HG2_PB_SVrefine2Falcon2Bionano_5925:HG2_PB_SVrefine2Falcon1plusDovetail_1830:HG2_Ill_scalpel_11532:HG2_Ill_manta_3403:HG2_Ill_SVrefine2DISCOVARplusDovetail_2018:HG2_Ill_GATKHCSBGrefine_8196:HG2_10X_allpass_1976:HG2_10X_SVrefine210Xhap12_8538;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8538:HG2_10X_allpass_1976:HG2_Ill_GATKHCSBGrefine_8196:HG2_Ill_SVrefine2DISCOVARplusDovetail_2018:HG2_Ill_manta_3403:HG2_Ill_scalpel_11532:HG2_PB_SVrefine2Falcon1plusDovetail_1830:HG2_PB_SVrefine2Falcon2Bionano_5925:HG2_PB_SVrefine2PB10Xhap12_8809:HG2_PB_SVrefine2PBcRplusDovetail_1739:HG2_PB_pbsv_12219:HG3_10X_allpass_2405:HG3_Ill_GATKHCSBGrefine_8084:HG3_Ill_SVrefine2DISCOVARDovetail_8879:HG3_Ill_manta_2775:HG3_Ill_scalpel_11715:HG3_PB_SVrefine2Falcon1Dovetail_7401:HG3_PB_SVrefine2PBcRDovetail_5680:HG3_PB_pbsv_11890:HG4_10X_allpass_2310:HG4_Ill_GATKHCSBGrefine_8429:HG4_Ill_SVrefine2DISCOVARDovetail_8656:HG4_Ill_manta_2892:HG4_Ill_scalpel_11210:HG4_PB_SVrefine2Falcon1Dovetail_7429:HG4_PB_SVrefine2PBcRDovetail_6134:HG4_PB_pbsv_12187;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0913386;ClusterMaxSizeDiff=0.0913386;ClusterMaxEditDist=0.0913386;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=80307;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=11:33537673-33538010;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=593.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:0:13:1:14:1/1:0:24:0:12:1/1:0:44:0/1:3:15:.:.:.
chr11	33659950	HG4_Ill_GATKHC_19512	TTTATTCTCTAAAATAAATAAAAAAAAAAAAAATAAATAAATAAATAAATAAATAAAATAC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_12188:HG2_PB_pbsv_12220:HG3_PB_pbsv_11891:HG4_Ill_manta_2893:HG3_Ill_manta_2776:HG2_Ill_manta_3404:HG2_Ill_SpiralSDKrefine_2625:HG4_CG_vcfBeta_7770:HG4_Ill_Spiral_973:HG3_Ill_Spiral_12701:HG2_Ill_Spiral_838:HG4_PB_assemblyticsfalcon_4068:HG4_Ill_svaba_15253:HG4_Ill_scalpel_11214:HG4_Ill_Krunchall_16856:HG4_Ill_GATKHC_19512:HG4_Ill_GATKHCSBGrefine_8430:HG4_Ill_250bpfermikitraw_16113:HG4_Ill_150bpfermikitraw_15487:HG4_10X_allpass_2311:HG3_PB_assemblyticsfalcon_4161:HG3_Ill_svaba_15363:HG3_Ill_scalpel_11719:HG3_Ill_Krunchall_16295:HG3_Ill_GATKHC_19410:HG3_Ill_GATKHCSBGrefine_8085:HG3_Ill_250bpfermikitraw_15825:HG3_Ill_150bpfermikitraw_15346:HG3_10X_allpass_2406:HG2_PB_assemblyticsfalcon_4165:HG2_Ill_svaba_15210:HG2_Ill_scalpel_11536:HG2_Ill_Krunchall_16608:HG2_Ill_GATKHC_19554:HG2_Ill_GATKHCSBGrefine_8197:HG2_Ill_250bpfermikitraw_16275:HG2_Ill_150bpfermikitraw_15337:HG2_10X_allpass_1977;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_1977:HG2_Ill_150bpfermikitraw_15337:HG2_Ill_250bpfermikitraw_16275:HG2_Ill_GATKHCSBGrefine_8197:HG2_Ill_GATKHC_19554:HG2_Ill_Krunchall_16608:HG2_Ill_scalpel_11536:HG2_Ill_svaba_15210:HG2_PB_assemblyticsfalcon_4165:HG3_10X_allpass_2406:HG3_Ill_150bpfermikitraw_15346:HG3_Ill_250bpfermikitraw_15825:HG3_Ill_GATKHCSBGrefine_8085:HG3_Ill_GATKHC_19410:HG3_Ill_Krunchall_16295:HG3_Ill_scalpel_11719:HG3_Ill_svaba_15363:HG3_PB_assemblyticsfalcon_4161:HG4_10X_allpass_2311:HG4_Ill_150bpfermikitraw_15487:HG4_Ill_250bpfermikitraw_16113:HG4_Ill_GATKHCSBGrefine_8430:HG4_Ill_GATKHC_19512:HG4_Ill_Krunchall_16856:HG4_Ill_scalpel_11214:HG4_Ill_svaba_15253:HG4_PB_assemblyticsfalcon_4068;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.101695;PBcalls=6;Illcalls=28;TenXcalls=3;CGcalls=1;PBexactcalls=3;Illexactcalls=21;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=13;NumTechs=4;NumTechsExact=3;SVLEN=-60;DistBack=2704;DistForward=3107;DistMin=2704;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:33659949-33660012;PctSeqSimilarity=0.9919;PctSizeSimilarity=0.9836;PctRecOverlap=0.9839;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:36:0|1:40:4:0:40:0|1:28:0:0:11:0/1:34:20:./.:.:.:.:.:.
chr11	34249340	HG2_PB_SVrefine2PBcRplusDovetail_1743	GGCATGATCTTGGCTCACTGCAACCTCTGCATCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCACCTGAGTATCTGGGATTACAGGCACGTGCCACCACACCTGGCTAATTTTTGTATTTTAAGTAGGGACAGGGTTTCGCAATGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAGGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACTTGGCCTACTTTTTTGTTTGTTTTCTTTTTGAGATAAGGTCTCACTTTGTTGCCCAGGCTGGAGTGCAGTGGTGTAATCTTGGCTCAGTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8542:HG2_PB_pbsv_12224:HG4_PB_pbsv_12192:HG3_PB_pbsv_11897:HG3_PB_HySA_18361:HG3_Ill_MetaSV_805:HG4_PB_SVrefine2PBcRDovetail_6137:HG4_PB_SVrefine2Falcon1Dovetail_7432:HG4_Ill_SVrefine2DISCOVARDovetail_8662:HG3_PB_SVrefine2PBcRDovetail_5683:HG3_PB_SVrefine2Falcon1Dovetail_7403:HG3_Ill_SVrefine2DISCOVARDovetail_8886:HG2_PB_SVrefine2PBcRplusDovetail_1743:HG2_PB_SVrefine2PB10Xhap12_8812:HG2_PB_SVrefine2Falcon2Bionano_5929:HG2_PB_SVrefine2Falcon1plusDovetail_1834:HG2_Ill_SVrefine2DISCOVARplusDovetail_2025;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8542:HG4_PB_SVrefine2PBcRDovetail_6137:HG4_PB_SVrefine2Falcon1Dovetail_7432:HG4_Ill_SVrefine2DISCOVARDovetail_8662:HG3_PB_SVrefine2PBcRDovetail_5683:HG3_PB_SVrefine2Falcon1Dovetail_7403:HG3_Ill_SVrefine2DISCOVARDovetail_8886:HG2_PB_SVrefine2PBcRplusDovetail_1743:HG2_PB_SVrefine2PB10Xhap12_8812:HG2_PB_SVrefine2Falcon2Bionano_5929:HG2_PB_SVrefine2Falcon1plusDovetail_1834:HG2_Ill_SVrefine2DISCOVARplusDovetail_2025;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00617284;ClusterMaxSizeDiff=0.00615385;ClusterMaxEditDist=0.0123457;PBcalls=12;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=63383;DistForward=-230;DistMin=-230;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=552;REFWIDENED=11:34249341-34250217;PctSeqSimilarity=0.9942;PctSizeSimilarity=1;PctRecOverlap=0.8926;SizeDiff=0;StartDistance=-35;EndDistance=-35;GTMatch=0;TruScore=96;MatchId=596.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:51:1/1:1:26:4:19:./.:5:1:2:1:0/0:15:1:./.:4:3:.:.:.
chr11	34728112	HG3_Ill_SVrefine2DISCOVARDovetail_8888	GAAGAGTTAAGCATTCATTGTAGTCTTTACAGTCTGGGCTTATTTGTGCCCATCTTTCTTGGGAAGGCTTTCCAGCTATTCAGAGAGACTTGGTCCCCAAGCCCCAAATTGCTGTGGTTCTTGTAGACTTGTACAGGTACCGCCTTGGTGGTTTTGGATAAGAGCTGGAAGAATTCTCTGGATTATCAGGCAGAGACTCTTGTTCTCTTCCCTTACTTTCCCTCAAAGAAATGGAGTCTCTCTCTCTCTGTGCTAAGCCAACTGGGGCTGGGGTGAACCTTTGTGACCTTTGTGACCACCACCACTGGGGCTGTGCTGAGTCAGACCTAAAGCCAGCATAGCACTGAGTCGTGCCCAATGCCTGCTGTAATCACTACCTGGCTATGGCCTATGTTCACTGAAGGCCTTCTTTGGGCCCTACAGTCAGCAAGTGAGGAAGCCAGCCAGGCTTATGTCCTTCCCTTCTGGCCCAGAGCAGGTCCAGAAATTCTGTCT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8543:HG2_10X_allpass_1978:HG2_PB_PB10Xdip_5447:HG4_PB_assemblyticsfalcon_4077:HG3_PB_assemblyticsfalcon_4171:HG2_PB_assemblyticsfalcon_4174:HG2_PB_assemblyticsPBcR_4022:HG4_PB_HySA_17717:HG2_Ill_tnscope_1360:HG4_Ill_GATKHCSBGrefine_8434:HG4_10X_allpass_2313:HG3_Ill_manta_2778:HG3_Ill_GATKHCSBGrefine_8090:HG3_10X_allpass_2409:HG2_PB_pbsv_12227:HG2_Ill_manta_3406:HG2_Ill_breakscan11_1764:HG2_Ill_SpiralSDKrefine_2630:HG2_Ill_GATKHCSBGrefine_8201:HG4_PB_pbsv_12195:HG4_Ill_Spiral_974:HG2_Ill_Spiral_839:HG2_Ill_Krunchall_16620:HG4_PB_SVrefine2PBcRDovetail_6139:HG4_PB_SVrefine2Falcon1Dovetail_7435:HG4_Ill_SVrefine2DISCOVARDovetail_8663:HG3_PB_pbsv_11901:HG3_PB_SVrefine2PBcRDovetail_5685:HG3_PB_SVrefine2Falcon1Dovetail_7406:HG3_Ill_SVrefine2DISCOVARDovetail_8888:HG2_PB_SVrefine2PBcRplusDovetail_1745:HG2_PB_SVrefine2PB10Xhap12_8814:HG2_PB_SVrefine2Falcon1plusDovetail_1837:HG2_Ill_SVrefine2DISCOVARplusDovetail_2026:HG2_PB_SVrefine2PB10Xhap12_8815;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8543:HG4_PB_SVrefine2PBcRDovetail_6139:HG4_PB_SVrefine2Falcon1Dovetail_7435:HG4_Ill_SVrefine2DISCOVARDovetail_8663:HG3_PB_pbsv_11901:HG3_PB_SVrefine2PBcRDovetail_5685:HG3_PB_SVrefine2Falcon1Dovetail_7406:HG3_Ill_SVrefine2DISCOVARDovetail_8888:HG2_PB_SVrefine2PBcRplusDovetail_1745:HG2_PB_SVrefine2PB10Xhap12_8814:HG2_PB_SVrefine2Falcon1plusDovetail_1837:HG2_Ill_SVrefine2DISCOVARplusDovetail_2026;NumExactMatchSVs=12;ClusterMaxShiftDist=0.236311;ClusterMaxSizeDiff=0.236311;ClusterMaxEditDist=0.236311;PBcalls=17;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-494;DistBack=10358;DistForward=-486;DistMin=-486;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=11:34728113-34728612;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.998;PctRecOverlap=0.9798;SizeDiff=-1;StartDistance=-9;EndDistance=-10;GTMatch=0;TruScore=98;MatchId=597.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:39:0|1:27:5:3:34:0|1:43:0:0:40:0/1:58:24:0/1:48:11:.:.:.
chr11	34865833	HG4_Ill_GATKHC_19531	ATATCTATATCTATATCTATATCTATATCTATATCTATCTATCTATCTATCTATC	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_4172:HG3_PB_HySA_18362:HG4_Ill_svaba_15272:HG3_Ill_svaba_15381:HG3_Ill_GATKHC_19424:HG3_Ill_GATKHCSBGrefine_8093:HG2_Ill_svaba_15225:HG4_Ill_svaba_15271:HG4_Ill_Krunchall_16875:HG4_Ill_GATKHC_19532:HG4_Ill_GATKHCSBGrefine_8436:HG4_Ill_250bpfermikitraw_16131:HG4_Ill_150bpfermikitraw_15502:HG2_PB_assemblyticsfalcon_4176:HG4_PB_HySA_17719:HG3_Ill_svaba_15380:HG3_Ill_Krunchall_16308:HG3_Ill_GATKHC_19423:HG3_Ill_GATKHCSBGrefine_8092:HG3_Ill_250bpfermikitraw_15837:HG3_Ill_150bpfermikitraw_15359:HG2_Ill_svaba_15224:HG2_Ill_GATKHC_19568:HG2_Ill_GATKHCSBGrefine_8203:HG2_Ill_250bpfermikitraw_16288:HG2_Ill_150bpfermikitraw_15350:HG2_PB_HySA_22152:HG2_PB_assemblyticsPBcR_4023:HG4_Ill_svaba_15270:HG4_Ill_manta_2895:HG4_Ill_Krunchall_16874:HG4_Ill_GATKHC_19531:HG4_Ill_GATKHCSBGrefine_8435:HG4_Ill_250bpfermikitraw_16130:HG4_Ill_150bpfermikitraw_15501:HG3_Ill_svaba_15379:HG3_Ill_manta_2779:HG3_Ill_Krunchall_16307:HG3_Ill_GATKHC_19422:HG3_Ill_GATKHCSBGrefine_8091:HG3_Ill_250bpfermikitraw_15836:HG3_Ill_150bpfermikitraw_15358:HG2_Ill_svaba_15223:HG2_Ill_GATKHC_19567:HG2_Ill_GATKHCSBGrefine_8202:HG2_Ill_250bpfermikitraw_16287:HG2_Ill_150bpfermikitraw_15349:HG4_PB_assemblyticsfalcon_4079;NumClusterSVs=48;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15349:HG2_Ill_250bpfermikitraw_16287:HG2_Ill_GATKHCSBGrefine_8202:HG2_Ill_GATKHC_19567:HG2_Ill_svaba_15223:HG3_Ill_150bpfermikitraw_15358:HG3_Ill_250bpfermikitraw_15836:HG3_Ill_GATKHCSBGrefine_8091:HG3_Ill_GATKHC_19422:HG3_Ill_Krunchall_16307:HG3_Ill_manta_2779:HG3_Ill_svaba_15379:HG4_Ill_150bpfermikitraw_15501:HG4_Ill_250bpfermikitraw_16130:HG4_Ill_GATKHCSBGrefine_8435:HG4_Ill_GATKHC_19531:HG4_Ill_Krunchall_16874:HG4_Ill_manta_2895:HG4_Ill_svaba_15270;NumExactMatchSVs=19;ClusterMaxShiftDist=0.244898;ClusterMaxSizeDiff=0.244898;ClusterMaxEditDist=0.244898;PBcalls=7;Illcalls=41;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=18;HG4count=16;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=63850;DistForward=-23;DistMin=-23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=11:34865832-34865895;PctSeqSimilarity=0.9423;PctSizeSimilarity=0.8889;PctRecOverlap=0.8909;SizeDiff=6;StartDistance=-6;EndDistance=0;GTMatch=0;TruScore=90;MatchId=598.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:78:1/1:3:30:1:26:./.:2:7:0:8:1/1:1:64:./.:.:.:.:.:.
chr11	36777801	HG2_PB_SVrefine2PB10Xhap12_8823	GAGACTAAGAGGGAAGGGACTGTTTTGAGAGCACAATAATATTTGACATTATAATTTGTGCTTTTCCCTGTATTTTCTTCTTTCATTTCCTCATTGAAGCAAGAGTCCAGGCACTAAGTTTCCTTCCCTCAGGAGAGTTTGCATCAAGGTGCAAGGTGGAAGCAGAGGTTGCCTACAAAACACTTTTCTTCCTGGCTTAGGGAAGTGTCATCTAATCAGAGCTCAATGGTAGGAAGTAGAGGGAAGGAAGTAGGGGATGAAAGACTGAAGTTGTTATAACAGCAAGAGCCTAAAGAGATGGCAGGACCTCAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8547:HG2_PB_PB10Xdip_5469:HG2_PB_PB10Xdip_5468:HG2_Ill_SVrefine2DISCOVARplusDovetail_2032:HG4_PB_HySA_17739:HG3_Ill_MetaSV_809:HG2_PB_HySA_22177:HG2_PB_pbsv_12238:HG4_PB_pbsv_12208:HG3_PB_pbsv_11915:HG4_PB_SVrefine2PBcRDovetail_6145:HG4_PB_SVrefine2Falcon1Dovetail_7445:HG4_Ill_SVrefine2DISCOVARDovetail_8668:HG3_PB_SVrefine2PBcRDovetail_5693:HG3_PB_SVrefine2Falcon1Dovetail_7416:HG3_PB_HySA_18384:HG3_Ill_SVrefine2DISCOVARDovetail_8891:HG2_PB_SVrefine2PBcRplusDovetail_1752:HG2_PB_SVrefine2PB10Xhap12_8823:HG2_PB_SVrefine2Falcon2Bionano_5937:HG2_PB_SVrefine2Falcon1plusDovetail_1846:HG2_Ill_SVrefine2DISCOVARplusDovetail_2031;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8547:HG4_PB_SVrefine2PBcRDovetail_6145:HG4_PB_SVrefine2Falcon1Dovetail_7445:HG4_Ill_SVrefine2DISCOVARDovetail_8668:HG3_PB_SVrefine2PBcRDovetail_5693:HG3_PB_SVrefine2Falcon1Dovetail_7416:HG3_PB_HySA_18384:HG3_Ill_SVrefine2DISCOVARDovetail_8891:HG2_PB_SVrefine2PBcRplusDovetail_1752:HG2_PB_SVrefine2PB10Xhap12_8823:HG2_PB_SVrefine2Falcon2Bionano_5937:HG2_PB_SVrefine2Falcon1plusDovetail_1846:HG2_Ill_SVrefine2DISCOVARplusDovetail_2031;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0547504;ClusterMaxSizeDiff=0.0547504;ClusterMaxEditDist=0.0646204;PBcalls=16;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=334;DistForward=-67;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=309;REFWIDENED=11:36777802-36778422;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=599.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:1:30:0:21:1/1:0:5:1:6:1/1:0:30:./.:2:3:.:.:.
chr11	37448804	HG4_CG_vcfBeta_7785	TTAAAAATAACTAACCTGCACAATGTGCACATGTACCCTAAAACTGAGAGTATAATAAAAAAAAAAAAAAGAAAAAAAAAAAATAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_17755:HG4_PB_pbsv_12212:HG3_PB_pbsv_11918:HG3_PB_SVrefine2PBcRDovetail_5694:HG2_PB_pbsv_12242:HG3_PB_HySA_18390:HG2_PB_HySA_22187:HG4_PB_SVrefine2PBcRDovetail_6146:HG4_PB_SVrefine2Falcon1Dovetail_7446:HG4_Ill_svaba_15288:HG4_Ill_scalpel_11235:HG4_Ill_SVrefine2DISCOVARDovetail_8669:HG4_Ill_Krunchall_16893:HG4_Ill_GATKHC_19556:HG4_Ill_GATKHCSBGrefine_8442:HG4_Ill_250bpfermikitraw_16148:HG4_Ill_150bpfermikitraw_15520:HG4_CG_vcfBeta_7785:HG4_10X_allpass_2314:HG3_PB_SVrefine2Falcon1Dovetail_7417:HG3_Ill_svaba_15400:HG3_Ill_manta_2781:HG3_Ill_SVrefine2DISCOVARDovetail_8893:HG3_Ill_Krunchall_16328:HG3_Ill_GATKHC_19447:HG3_Ill_GATKHCSBGrefine_8100:HG3_Ill_250bpfermikitraw_15857:HG3_Ill_150bpfermikitraw_15380:HG3_10X_allpass_2411:HG2_PB_SVrefine2Falcon2Bionano_5938:HG2_Ill_svaba_15242:HG2_Ill_SpiralSDKrefine_2646:HG2_Ill_Krunchall_16636:HG2_Ill_GATKHC_19591:HG2_Ill_GATKHCSBGrefine_8212:HG2_Ill_250bpfermikitraw_16314:HG2_Ill_150bpfermikitraw_15377:HG2_10X_SVrefine210Xhap12_8549:HG2_Ill_breakscan11_1765;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8549:HG2_Ill_150bpfermikitraw_15377:HG2_Ill_250bpfermikitraw_16314:HG2_Ill_GATKHCSBGrefine_8212:HG2_Ill_GATKHC_19591:HG2_Ill_Krunchall_16636:HG2_Ill_SpiralSDKrefine_2646:HG2_Ill_svaba_15242:HG2_PB_SVrefine2Falcon2Bionano_5938:HG3_10X_allpass_2411:HG3_Ill_150bpfermikitraw_15380:HG3_Ill_250bpfermikitraw_15857:HG3_Ill_GATKHCSBGrefine_8100:HG3_Ill_GATKHC_19447:HG3_Ill_Krunchall_16328:HG3_Ill_SVrefine2DISCOVARDovetail_8893:HG3_Ill_manta_2781:HG3_Ill_svaba_15400:HG3_PB_SVrefine2Falcon1Dovetail_7417:HG4_10X_allpass_2314:HG4_CG_vcfBeta_7785:HG4_Ill_150bpfermikitraw_15520:HG4_Ill_250bpfermikitraw_16148:HG4_Ill_GATKHCSBGrefine_8442:HG4_Ill_GATKHC_19556:HG4_Ill_Krunchall_16893:HG4_Ill_SVrefine2DISCOVARDovetail_8669:HG4_Ill_scalpel_11235:HG4_Ill_svaba_15288:HG4_PB_SVrefine2Falcon1Dovetail_7446:HG4_PB_SVrefine2PBcRDovetail_6146;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0215054;ClusterMaxSizeDiff=0.0215054;ClusterMaxEditDist=0.0217391;PBcalls=11;Illcalls=24;TenXcalls=3;CGcalls=1;PBexactcalls=4;Illexactcalls=23;TenXexactcalls=3;CGexactcalls=1;HG2count=12;HG3count=13;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-92;DistBack=14156;DistForward=-81;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=11:37448805-37448909;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=600.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:20:./.:20:0:6:16:0|1:15:0:0:10:0/1:23:21:./.:.:.:.:.:.
chr11	38099576	HG4_Ill_GATKHCSBGrefine_8444	TAGAAAAATTGATCTTGAATTTTTTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAACTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCCTCCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_840:HG2_PB_assemblyticsPBcR_4045:HG4_Ill_Krunchall_16898:HG2_PB_pbsv_12247:HG4_PB_pbsv_12217:HG2_PB_PB10Xdip_5489:HG2_PB_SVrefine2PB10Xhap12_8828:HG2_Ill_tnscope_1361:HG4_PB_SVrefine2PBcRDovetail_6150:HG4_PB_SVrefine2Falcon1Dovetail_7449:HG4_Ill_manta_2898:HG4_Ill_GATKHCSBGrefine_8444:HG4_10X_allpass_2315:HG3_PB_SVrefine2Falcon1Dovetail_7422:HG2_PB_SVrefine2PBcRplusDovetail_1755:HG2_PB_SVrefine2PB10Xhap12_8827:HG2_PB_HySA_22196:HG2_Ill_manta_3413:HG2_Ill_SVrefine2DISCOVARplusDovetail_2037:HG2_Ill_GATKHCSBGrefine_8214:HG2_10X_allpass_1979:HG2_10X_SVrefine210Xhap12_8551:HG2_Ill_breakscan11_1766:HG4_Ill_Spiral_976;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8551:HG2_10X_allpass_1979:HG2_Ill_GATKHCSBGrefine_8214:HG2_Ill_SVrefine2DISCOVARplusDovetail_2037:HG2_Ill_manta_3413:HG2_PB_HySA_22196:HG2_PB_SVrefine2PB10Xhap12_8827:HG2_PB_SVrefine2PBcRplusDovetail_1755:HG3_PB_SVrefine2Falcon1Dovetail_7422:HG4_10X_allpass_2315:HG4_Ill_GATKHCSBGrefine_8444:HG4_Ill_manta_2898:HG4_PB_SVrefine2Falcon1Dovetail_7449:HG4_PB_SVrefine2PBcRDovetail_6150;NumExactMatchSVs=14;ClusterMaxShiftDist=0.159624;ClusterMaxSizeDiff=0.159624;ClusterMaxEditDist=0.159624;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-163;DistForward=569;DistMin=-163;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=11:38099577-38099933;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:32:0|1:38:1:1:30:0|1:33:0:0:21:0/1:25:21:0/1:21:6:.:.:.
chr11	39010739	HG2_Ill_Krunchall_16648	CTTTCTTTCTTTTTCGTTTCCTTCCTTCCTTCCATGCTTCCTTCCTTCCTGCCTGCCTTTTTTTTTT	C	20	PASS	ClusterIDs=HG3_PB_HySA_18405:HG4_PB_assemblyticsfalcon_4110:HG2_Ill_Krunchall_16649:HG3_Ill_Spiral_12728:HG2_PB_HySA_22210:HG2_Ill_Spiral_842:HG4_Ill_scalpel_11245:HG4_Ill_manta_2902:HG4_Ill_Krunchall_16909:HG4_Ill_GATKHC_19572:HG4_Ill_GATKHCSBGrefine_8452:HG4_Ill_250bpfermikitraw_16162:HG4_Ill_150bpfermikitraw_15532:HG4_10X_allpass_2317:HG3_Ill_scalpel_11749:HG3_Ill_manta_2785:HG3_Ill_GATKHC_19462:HG3_Ill_GATKHCSBGrefine_8109:HG3_Ill_250bpfermikitraw_15867:HG3_Ill_150bpfermikitraw_15392:HG3_CG_vcfBeta_6613:HG3_10X_allpass_2414:HG2_Ill_scalpel_11566:HG2_Ill_manta_3416:HG2_Ill_SpiralSDKrefine_2661:HG2_Ill_Krunchall_16648:HG2_Ill_GATKHC_19607:HG2_Ill_GATKHCSBGrefine_8221:HG2_Ill_250bpfermikitraw_16327:HG2_Ill_150bpfermikitraw_15390:HG2_10X_allpass_1980:HG4_PB_HySA_17777:HG2_Ill_breakscan11_1767:HG2_PB_SVrefine2Falcon1plusDovetail_1853:HG4_PB_SVrefine2PBcRDovetail_6155:HG4_Ill_SVrefine2DISCOVARDovetail_8675:HG3_PB_SVrefine2Falcon1Dovetail_7426:HG2_PB_pbsv_12253:HG2_PB_SVrefine2PBcRplusDovetail_1759:HG2_PB_SVrefine2PB10Xhap12_8832:HG2_PB_SVrefine2Falcon2Bionano_5946:HG2_Ill_SVrefine2DISCOVARplusDovetail_2043:HG2_10X_SVrefine210Xhap12_8557:HG4_PB_pbsv_12223:HG3_PB_pbsv_11926;NumClusterSVs=45;ExactMatchIDs=HG2_10X_allpass_1980:HG2_Ill_150bpfermikitraw_15390:HG2_Ill_250bpfermikitraw_16327:HG2_Ill_GATKHCSBGrefine_8221:HG2_Ill_GATKHC_19607:HG2_Ill_Krunchall_16648:HG2_Ill_SpiralSDKrefine_2661:HG2_Ill_manta_3416:HG2_Ill_scalpel_11566:HG3_10X_allpass_2414:HG3_CG_vcfBeta_6613:HG3_Ill_150bpfermikitraw_15392:HG3_Ill_250bpfermikitraw_15867:HG3_Ill_GATKHCSBGrefine_8109:HG3_Ill_GATKHC_19462:HG3_Ill_manta_2785:HG3_Ill_scalpel_11749:HG4_10X_allpass_2317:HG4_Ill_150bpfermikitraw_15532:HG4_Ill_250bpfermikitraw_16162:HG4_Ill_GATKHCSBGrefine_8452:HG4_Ill_GATKHC_19572:HG4_Ill_Krunchall_16909:HG4_Ill_manta_2902:HG4_Ill_scalpel_11245;NumExactMatchSVs=25;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.153846;PBcalls=13;Illcalls=27;TenXcalls=4;CGcalls=1;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=3;CGexactcalls=1;HG2count=20;HG3count=12;HG4count=13;NumTechs=4;NumTechsExact=3;SVLEN=-66;DistBack=5346;DistForward=35249;DistMin=5346;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=11:39010735-39010818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=602.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:./.:2:3:0:11:./.:0:0:0:3:1/1:0:28:./.:.:.:.:.:.
chr11	39785905	HG4_Ill_manta_2905	AAAGATGAGTCTAAACCTAGTTAAAAAGAAAAAGAAAATGTTTACACAAGGTATAAAAAGGGACTACACC	A	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_2667:HG4_Ill_Cortex_573:HG3_Ill_Cortex_610:HG2_Ill_Cortex_1373:HG4_PB_HySA_17785:HG2_PB_HySA_22222:HG3_PB_assemblyticsfalcon_4222:HG4_PB_pbsv_12226:HG4_PB_assemblyticsfalcon_4118:HG4_Ill_svaba_15310:HG4_Ill_scalpel_11257:HG4_Ill_manta_2905:HG4_Ill_Krunchall_16919:HG4_Ill_GATKHC_19586:HG4_Ill_GATKHCSBGrefine_8455:HG4_Ill_250bpfermikitraw_16175:HG4_Ill_150bpfermikitraw_15545:HG4_CG_vcfBeta_7797:HG3_PB_pbsv_11928:HG3_PB_HySA_18412:HG3_Ill_svaba_15418:HG3_Ill_scalpel_11756:HG3_Ill_manta_2787:HG3_Ill_Krunchall_16349:HG3_Ill_GATKHC_19472:HG3_Ill_GATKHCSBGrefine_8112:HG3_Ill_250bpfermikitraw_15877:HG3_Ill_150bpfermikitraw_15401:HG3_CG_vcfBeta_6618:HG3_10X_allpass_2415:HG2_PB_pbsv_12256:HG2_PB_assemblyticsfalcon_4216:HG2_PB_assemblyticsPBcR_4065:HG2_Ill_svaba_15264:HG2_Ill_scalpel_11576:HG2_Ill_manta_3418:HG2_Ill_Krunchall_16660:HG2_Ill_GATKHC_19620:HG2_Ill_GATKHCSBGrefine_8225:HG2_Ill_250bpfermikitraw_16341:HG2_Ill_150bpfermikitraw_15405:HG2_CG_vcfBeta_6950:HG2_10X_allpass_1981:HG4_Ill_Spiral_978:HG3_Ill_Spiral_12734;NumClusterSVs=45;ExactMatchIDs=HG2_10X_allpass_1981:HG2_CG_vcfBeta_6950:HG2_Ill_150bpfermikitraw_15405:HG2_Ill_250bpfermikitraw_16341:HG2_Ill_GATKHCSBGrefine_8225:HG2_Ill_GATKHC_19620:HG2_Ill_Krunchall_16660:HG2_Ill_manta_3418:HG2_Ill_scalpel_11576:HG2_Ill_svaba_15264:HG2_PB_assemblyticsPBcR_4065:HG2_PB_assemblyticsfalcon_4216:HG2_PB_pbsv_12256:HG3_10X_allpass_2415:HG3_CG_vcfBeta_6618:HG3_Ill_150bpfermikitraw_15401:HG3_Ill_250bpfermikitraw_15877:HG3_Ill_GATKHCSBGrefine_8112:HG3_Ill_GATKHC_19472:HG3_Ill_Krunchall_16349:HG3_Ill_manta_2787:HG3_Ill_scalpel_11756:HG3_Ill_svaba_15418:HG3_PB_HySA_18412:HG3_PB_pbsv_11928:HG4_CG_vcfBeta_7797:HG4_Ill_150bpfermikitraw_15545:HG4_Ill_250bpfermikitraw_16175:HG4_Ill_GATKHCSBGrefine_8455:HG4_Ill_GATKHC_19586:HG4_Ill_Krunchall_16919:HG4_Ill_manta_2905:HG4_Ill_scalpel_11257:HG4_Ill_svaba_15310:HG4_PB_assemblyticsfalcon_4118:HG4_PB_pbsv_12226;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0142857;ClusterMaxSizeDiff=0.0141844;ClusterMaxEditDist=0.0425532;PBcalls=10;Illcalls=30;TenXcalls=2;CGcalls=3;PBexactcalls=7;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=3;HG2count=16;HG3count=15;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-69;DistBack=-70;DistForward=733;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=11:39785906-39785977;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:./.:0:0:0:1:1/1:0:14:0:10:1/1:0:35:./.:.:.:.:.:.
chr11	39805114	HG2_Ill_SVrefine2DISCOVARplusDovetail_2048	ACAATTTGTAATATATTTTTTTTTTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1768:HG3_PB_assemblyticsfalcon_4223:HG2_PB_assemblyticsfalcon_4217:HG2_10X_allpass_1982:HG4_PB_assemblyticsfalcon_4119:HG2_PB_assemblyticsPBcR_4066:HG4_Ill_Krunchall_16920:HG3_PB_pbsv_11929:HG2_PB_pbsv_12257:HG2_PB_HySA_22223:HG4_PB_pbsv_12227:HG3_PB_HySA_18413:HG3_Ill_MetaSV_815:HG2_Ill_tnscope_1362:HG4_PB_SVrefine2PBcRDovetail_6157:HG4_PB_SVrefine2Falcon1Dovetail_7454:HG4_Ill_svaba_15311:HG4_Ill_scalpel_11258:HG4_Ill_manta_2906:HG4_Ill_SVrefine2DISCOVARDovetail_8679:HG4_Ill_GATKHCSBGrefine_8456:HG4_10X_allpass_2319:HG3_PB_SVrefine2PBcRDovetail_5702:HG3_PB_SVrefine2Falcon1Dovetail_7428:HG3_Ill_svaba_15419:HG3_Ill_scalpel_11757:HG3_Ill_manta_2788:HG3_Ill_SVrefine2DISCOVARDovetail_8906:HG3_Ill_GATKHCSBGrefine_8113:HG3_10X_allpass_2416:HG2_PB_SVrefine2PBcRplusDovetail_1761:HG2_PB_SVrefine2PB10Xhap12_8834:HG2_PB_SVrefine2Falcon2Bionano_5948:HG2_PB_SVrefine2Falcon1plusDovetail_1855:HG2_Ill_svaba_15265:HG2_Ill_scalpel_11577:HG2_Ill_manta_3419:HG2_Ill_SpiralSDKrefine_2668:HG2_Ill_SVrefine2DISCOVARplusDovetail_2048:HG2_Ill_GATKHCSBGrefine_8226:HG2_10X_SVrefine210Xhap12_8561;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8561:HG2_Ill_GATKHCSBGrefine_8226:HG2_Ill_SVrefine2DISCOVARplusDovetail_2048:HG2_Ill_SpiralSDKrefine_2668:HG2_Ill_manta_3419:HG2_Ill_scalpel_11577:HG2_Ill_svaba_15265:HG2_PB_SVrefine2Falcon1plusDovetail_1855:HG2_PB_SVrefine2Falcon2Bionano_5948:HG2_PB_SVrefine2PB10Xhap12_8834:HG2_PB_SVrefine2PBcRplusDovetail_1761:HG3_10X_allpass_2416:HG3_Ill_GATKHCSBGrefine_8113:HG3_Ill_SVrefine2DISCOVARDovetail_8906:HG3_Ill_manta_2788:HG3_Ill_scalpel_11757:HG3_Ill_svaba_15419:HG3_PB_SVrefine2Falcon1Dovetail_7428:HG3_PB_SVrefine2PBcRDovetail_5702:HG4_10X_allpass_2319:HG4_Ill_GATKHCSBGrefine_8456:HG4_Ill_SVrefine2DISCOVARDovetail_8679:HG4_Ill_manta_2906:HG4_Ill_scalpel_11258:HG4_Ill_svaba_15311:HG4_PB_SVrefine2Falcon1Dovetail_7454:HG4_PB_SVrefine2PBcRDovetail_6157;NumExactMatchSVs=27;ClusterMaxShiftDist=0.103817;ClusterMaxSizeDiff=0.103817;ClusterMaxEditDist=0.103817;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=18363;DistForward=1802;DistMin=1802;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=11:39805115-39805466;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=604.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:70:1/1:0:36:0:33:1/1:0:13:0:12:1/1:0:49:0/1:2:9:.:.:.
chr11	41007018	HG3_PB_pbsv_11933	ATAAAGAACATTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_16667:HG4_PB_HySA_17790:HG3_10X_allpass_2417:HG3_PB_assemblyticsfalcon_4231:HG2_PB_assemblyticsfalcon_4222:HG2_PB_assemblyticsPBcR_4071:HG3_Ill_Krunchall_16359:HG2_Ill_Krunchall_16668:HG2_PB_HySA_22232:HG4_PB_pbsv_12229:HG3_PB_HySA_18422:HG2_PB_HySA_22231:HG3_Ill_MetaSV_818:HG2_Ill_tnscope_1363:HG4_PB_assemblyticsfalcon_4125:HG4_PB_SVrefine2PBcRDovetail_6158:HG4_PB_SVrefine2Falcon1Dovetail_7456:HG4_Ill_manta_2907:HG4_Ill_SVrefine2DISCOVARDovetail_8681:HG4_Ill_GATKHCSBGrefine_8458:HG4_10X_allpass_2321:HG3_PB_pbsv_11933:HG3_PB_SVrefine2PBcRDovetail_5704:HG3_PB_SVrefine2Falcon1Dovetail_7431:HG3_PB_HySA_18421:HG3_Ill_scalpel_11763:HG3_Ill_manta_2790:HG3_Ill_SVrefine2DISCOVARDovetail_8910:HG3_Ill_GATKHCSBGrefine_8116:HG2_PB_pbsv_12260:HG2_PB_SVrefine2PBcRplusDovetail_1763:HG2_PB_SVrefine2PB10Xhap12_8837:HG2_PB_SVrefine2Falcon2Bionano_5951:HG2_PB_SVrefine2Falcon1plusDovetail_1858:HG2_Ill_scalpel_11581:HG2_Ill_SVrefine2DISCOVARplusDovetail_2051:HG2_Ill_GATKHCSBGrefine_8227:HG2_10X_allpass_1983:HG2_10X_SVrefine210Xhap12_8563:HG2_Ill_breakscan11_1769:HG4_Ill_Spiral_979:HG4_Ill_Krunchall_16925;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8563:HG2_10X_allpass_1983:HG2_Ill_GATKHCSBGrefine_8227:HG2_Ill_SVrefine2DISCOVARplusDovetail_2051:HG2_Ill_scalpel_11581:HG2_PB_SVrefine2Falcon1plusDovetail_1858:HG2_PB_SVrefine2Falcon2Bionano_5951:HG2_PB_SVrefine2PB10Xhap12_8837:HG2_PB_SVrefine2PBcRplusDovetail_1763:HG2_PB_pbsv_12260:HG3_Ill_GATKHCSBGrefine_8116:HG3_Ill_SVrefine2DISCOVARDovetail_8910:HG3_Ill_manta_2790:HG3_Ill_scalpel_11763:HG3_PB_HySA_18421:HG3_PB_SVrefine2Falcon1Dovetail_7431:HG3_PB_SVrefine2PBcRDovetail_5704:HG3_PB_pbsv_11933:HG4_10X_allpass_2321:HG4_Ill_GATKHCSBGrefine_8458:HG4_Ill_SVrefine2DISCOVARDovetail_8681:HG4_Ill_manta_2907:HG4_PB_SVrefine2Falcon1Dovetail_7456:HG4_PB_SVrefine2PBcRDovetail_6158:HG4_PB_assemblyticsfalcon_4125;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0853081;ClusterMaxSizeDiff=0.0853081;ClusterMaxEditDist=0.243671;PBcalls=20;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=574;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=11:41007019-41007354;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=605.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:55:1/1:1:40:0:24:1/1:0:35:0:36:1/1:0:43:./.:1:7:.:.:.
chr11	41308137	HG2_Ill_SpiralSDKrefine_2674	AAGATCCTTAGTCACAGCTTGGGCCTGTCAGGTAATGTTACTTTGCTTTTAGAATTGACATTTACTCTTTCCTACTATT	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_4235:HG4_PB_pbsv_12231:HG2_PB_pbsv_12262:HG3_PB_pbsv_11935:HG4_PB_SVrefine2Falcon1Dovetail_7458:HG4_PB_HySA_17793:HG4_Ill_svaba_15318:HG4_Ill_scalpel_11265:HG4_Ill_GATKHCSBGrefine_8460:HG4_Ill_250bpfermikitraw_16186:HG4_10X_allpass_2322:HG3_PB_HySA_18423:HG3_Ill_svaba_15426:HG3_Ill_scalpel_11764:HG3_Ill_manta_2792:HG3_Ill_GATKHCSBGrefine_8118:HG3_Ill_250bpfermikitraw_15889:HG2_PB_SVrefine2PBcRplusDovetail_1765:HG2_PB_SVrefine2PB10Xhap12_8839:HG2_PB_HySA_22234:HG2_Ill_svaba_15270:HG2_Ill_scalpel_11582:HG2_Ill_manta_3421:HG2_Ill_SpiralSDKrefine_2674:HG2_Ill_SVrefine2DISCOVARplusDovetail_2053:HG2_Ill_GATKHCSBGrefine_8229:HG2_Ill_250bpfermikitraw_16351:HG2_10X_SVrefine210Xhap12_8565;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8565:HG2_Ill_250bpfermikitraw_16351:HG2_Ill_GATKHCSBGrefine_8229:HG2_Ill_SVrefine2DISCOVARplusDovetail_2053:HG2_Ill_SpiralSDKrefine_2674:HG2_Ill_manta_3421:HG2_Ill_scalpel_11582:HG2_Ill_svaba_15270:HG2_PB_HySA_22234:HG2_PB_SVrefine2PB10Xhap12_8839:HG2_PB_SVrefine2PBcRplusDovetail_1765:HG3_Ill_250bpfermikitraw_15889:HG3_Ill_GATKHCSBGrefine_8118:HG3_Ill_manta_2792:HG3_Ill_scalpel_11764:HG3_Ill_svaba_15426:HG3_PB_HySA_18423:HG4_10X_allpass_2322:HG4_Ill_250bpfermikitraw_16186:HG4_Ill_GATKHCSBGrefine_8460:HG4_Ill_scalpel_11265:HG4_Ill_svaba_15318:HG4_PB_HySA_17793:HG4_PB_SVrefine2Falcon1Dovetail_7458;NumExactMatchSVs=24;ClusterMaxShiftDist=0.025641;ClusterMaxSizeDiff=0.025641;ClusterMaxEditDist=0.0387097;PBcalls=10;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-78;DistBack=42415;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=79;REFWIDENED=11:41308138-41308294;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=606.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:38:./.:9:27:12:7:./.:0:9:9:1:0/1:17:24:./.:.:.:.:.:.
chr11	41363517	HG2_PB_pbsv_12264	TCTATAATATCTGGGACATAGAGAGTCATCTTGACCTAACTTTTCATGAACCTCACCCCTGGTTTCTCAAAGTCACATTCCAAAAACATTTTTGAATAGGTGAGGCATTGAAGCCTTGTATCTTCTTAAAACAACACAGTTACTATTAATATTAACACAGTTACCTCCACTATTACTGACCATTGGCTCCATGAGTGACAACACTGCCTAAAATATTAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_12232:HG2_PB_HySA_22235:HG4_Ill_svaba_15319:HG4_Ill_scalpel_11266:HG4_Ill_manta_2908:HG4_Ill_GATKHCSBGrefine_8461:HG4_Ill_Cortex_575:HG2_PB_pbsv_12264:HG2_Ill_svaba_15271:HG2_Ill_scalpel_11583:HG2_Ill_breakscan11_1770:HG2_Ill_SpiralSDKrefine_2675:HG2_Ill_GATKHCSBGrefine_8230:HG2_Ill_Cortex_1378:HG2_10X_allpass_1984:HG4_Ill_Krunchall_16930:HG2_Ill_Krunchall_16671:HG2_PB_assemblyticsPBcR_4076:HG4_PB_SVrefine2PBcRDovetail_6161:HG4_Ill_SVrefine2DISCOVARDovetail_8683:HG2_PB_SVrefine2PBcRplusDovetail_1767:HG2_PB_SVrefine2PB10Xhap12_8841:HG2_Ill_SVrefine2DISCOVARplusDovetail_2054:HG2_10X_SVrefine210Xhap12_8566;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_1984:HG2_Ill_Cortex_1378:HG2_Ill_GATKHCSBGrefine_8230:HG2_Ill_SpiralSDKrefine_2675:HG2_Ill_breakscan11_1770:HG2_Ill_scalpel_11583:HG2_Ill_svaba_15271:HG2_PB_pbsv_12264:HG4_Ill_Cortex_575:HG4_Ill_GATKHCSBGrefine_8461:HG4_Ill_manta_2908:HG4_Ill_scalpel_11266:HG4_Ill_svaba_15319;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0413793;ClusterMaxSizeDiff=0.0413793;ClusterMaxEditDist=0.0413793;PBcalls=7;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-218;DistBack=37030;DistForward=-213;DistMin=-213;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:41363518-41363736;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:44:1|0:6:36:30:3:1|0:0:19:49:0:0/1:43:23:./.:.:.:.:.:.
chr11	41780068	HG4_PB_SVrefine2Falcon1Dovetail_7461	AAGTCAAATATATTGAGAAGTGTTCTACTTTATAATACTCCCTGTGCCTTATCCAACTTACATTCTATCCCTGGGAGGATCACAAGGCACATTAGTATATTACAAATTCTC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8568:HG3_PB_assemblyticsfalcon_4243:HG3_PB_SVrefine2Falcon1Dovetail_7433:HG4_PB_pbsv_12235:HG3_PB_pbsv_11939:HG2_PB_pbsv_12267:HG4_PB_SVrefine2Falcon1Dovetail_7461:HG3_PB_SVrefine2PBcRDovetail_5707:HG3_Ill_SVrefine2DISCOVARDovetail_8918:HG2_PB_SVrefine2PBcRplusDovetail_1768:HG2_PB_SVrefine2PB10Xhap12_8842:HG2_PB_SVrefine2Falcon2Bionano_5955:HG2_PB_SVrefine2Falcon1plusDovetail_1860:HG2_Ill_SVrefine2DISCOVARplusDovetail_2057;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8568:HG4_PB_SVrefine2Falcon1Dovetail_7461:HG3_PB_SVrefine2PBcRDovetail_5707:HG3_Ill_SVrefine2DISCOVARDovetail_8918:HG2_PB_SVrefine2PBcRplusDovetail_1768:HG2_PB_SVrefine2PB10Xhap12_8842:HG2_PB_SVrefine2Falcon2Bionano_5955:HG2_PB_SVrefine2Falcon1plusDovetail_1860:HG2_Ill_SVrefine2DISCOVARplusDovetail_2057;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0181818;ClusterMaxEditDist=0.0458716;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-110;DistBack=0;DistForward=-110;DistMin=-110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=222;REFWIDENED=11:41780069-41780400;PctSeqSimilarity=0.9942;PctSizeSimilarity=1;PctRecOverlap=0.6757;SizeDiff=0;StartDistance=-36;EndDistance=-36;GTMatch=0;TruScore=88;MatchId=608.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:61:1/1:5:34:1:23:./.:5:1:6:0:0/1:9:8:./.:.:.:.:.:.
chr11	41818196	HG4_PB_SVrefine2Falcon1Dovetail_7462	GATCTGACAAGCTGGCAGAGAAATTTTTATTATACCCTCTGAACTTACTGTTGCTGCTAGCCCATCCAGGATATTAAAATAATAATGTCACAATGTTTAGACATGGTTAATTAAATACATGCTTCTCCTGGTGTATAGTTTATCATCATAGAATACTACAGGCCTCCTACTTAGAGTGGCTCCCTTGTCATTCATGTTTGGCCAATCTCTGAAGTCTTGGAAGTACGTTAACTTCCAACAGTCTCTCTCATGGGGCACAACACTAGCATTTCAAAGGGCAATCAATTACAAATCTGTGCCAATCAAATGATAATTGATTAGTGATACTTCCTCATGTCAGACCTTGATCAAAAGGGAAATGTGGAATGTGATATACAACATGGTTTCACTCTGGTTCAGAGCTCTAAAGTGGAGTCAGGAAGCCATTCTAAGGAGGACTACCTGGCCATCCTGCAATAATGCAAAAACCCTATAGACTGTTTTAAACTTTTGAACTGGACCAAACTGCTCCAACCACAACATCCCAGGAAGCAGCTGAGCTTCACCAGCTCTGCAACTCTTGAACAGCAGCAACCAATGAACTATGGATTCGTGTACTAAGCCAGGCACCTAAAACAATGGTAATTCCTTCAAAATAACTTCTGTTATCACCCTCATCTTTTTAAAAAAACTGGCCAATTTTTTAAAAAACAATTTTTTTGTAGAGAGCAAGTCTTGGCTCTCACTTTGTGGCCCAGGCTGTTCTTGAATTCCTGGTTTCCAGTGATTCTCCTACCTCGGTATCCCAAAGTGCTGAGATTACATGTGTAAGCCACATCCAGCCTCAA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_11940:HG2_10X_allpass_1985:HG3_PB_HySA_18429:HG2_PB_HySA_22243:HG4_10X_allpass_2323:HG2_Ill_tnscope_1364:HG4_PB_SVrefine2PBcRDovetail_6162:HG4_PB_SVrefine2Falcon1Dovetail_7462:HG3_PB_SVrefine2PBcRDovetail_5708:HG3_PB_SVrefine2Falcon1Dovetail_7434:HG3_Ill_manta_2793:HG3_Ill_SVrefine2DISCOVARDovetail_8919:HG3_Ill_MetaSV_819:HG3_Ill_Krunchall_16367:HG3_Ill_GATKHCSBGrefine_8122:HG3_10X_allpass_2419:HG2_PB_pbsv_12268:HG2_PB_SVrefine2PBcRplusDovetail_1769:HG2_PB_SVrefine2PB10Xhap12_8843:HG2_PB_SVrefine2Falcon2Bionano_5956:HG2_PB_SVrefine2Falcon1plusDovetail_1861:HG2_Ill_manta_3422:HG2_Ill_SpiralSDKrefine_2679:HG2_Ill_SVrefine2DISCOVARplusDovetail_2058:HG2_Ill_Krunchall_16675:HG2_10X_SVrefine210Xhap12_8569:HG4_Ill_Spiral_980:HG3_Ill_Spiral_12749:HG2_Ill_Spiral_844:HG4_PB_pbsv_12236;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8569:HG2_Ill_Krunchall_16675:HG2_Ill_SVrefine2DISCOVARplusDovetail_2058:HG2_Ill_SpiralSDKrefine_2679:HG2_Ill_manta_3422:HG2_PB_SVrefine2Falcon1plusDovetail_1861:HG2_PB_SVrefine2Falcon2Bionano_5956:HG2_PB_SVrefine2PB10Xhap12_8843:HG2_PB_SVrefine2PBcRplusDovetail_1769:HG2_PB_pbsv_12268:HG3_10X_allpass_2419:HG3_Ill_GATKHCSBGrefine_8122:HG3_Ill_Krunchall_16367:HG3_Ill_MetaSV_819:HG3_Ill_SVrefine2DISCOVARDovetail_8919:HG3_Ill_manta_2793:HG3_PB_SVrefine2Falcon1Dovetail_7434:HG3_PB_SVrefine2PBcRDovetail_5708:HG4_PB_SVrefine2Falcon1Dovetail_7462:HG4_PB_SVrefine2PBcRDovetail_6162;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0977045;ClusterMaxSizeDiff=0.0977045;ClusterMaxEditDist=0.0977045;PBcalls=13;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-826;DistBack=24919;DistForward=-826;DistMin=-826;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=11:41818197-41819024;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=609.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:1:20:1:20:1/1:0:20:0:21:1/1:0:21:0/1:4:29:.:.:.
chr11	41822280	HG2_PB_pbsv_12269	TAAAAAAGACCCTGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGGAGAATGGTGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_16676:HG4_10X_allpass_2324:HG3_PB_HySA_18430:HG3_Ill_MetaSV_820:HG2_PB_HySA_22244:HG2_Ill_tnscope_1365:HG4_PB_pbsv_12237:HG4_PB_SVrefine2PBcRDovetail_6163:HG4_PB_SVrefine2Falcon1Dovetail_7463:HG4_Ill_svaba_15324:HG4_Ill_manta_2909:HG4_Ill_GATKHCSBGrefine_8463:HG3_PB_pbsv_11941:HG3_PB_SVrefine2PBcRDovetail_5709:HG3_PB_SVrefine2Falcon1Dovetail_7435:HG3_Ill_svaba_15429:HG3_Ill_scalpel_11769:HG3_Ill_manta_2794:HG3_Ill_SVrefine2DISCOVARDovetail_8920:HG3_Ill_GATKHCSBGrefine_8123:HG3_10X_allpass_2420:HG2_PB_pbsv_12269:HG2_PB_SVrefine2PBcRplusDovetail_1770:HG2_PB_SVrefine2PB10Xhap12_8844:HG2_PB_SVrefine2Falcon2Bionano_5957:HG2_PB_SVrefine2Falcon1plusDovetail_1862:HG2_Ill_svaba_15274:HG2_Ill_scalpel_11586:HG2_Ill_manta_3423:HG2_Ill_breakscan11_1771:HG2_Ill_SVrefine2DISCOVARplusDovetail_2059:HG2_Ill_GATKHCSBGrefine_8233:HG2_10X_allpass_1986:HG2_10X_SVrefine210Xhap12_8570:HG3_Ill_Krunchall_16368:HG2_Ill_Krunchall_16677:HG4_Ill_Krunchall_16935;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8570:HG2_10X_allpass_1986:HG2_Ill_GATKHCSBGrefine_8233:HG2_Ill_SVrefine2DISCOVARplusDovetail_2059:HG2_Ill_breakscan11_1771:HG2_Ill_manta_3423:HG2_Ill_scalpel_11586:HG2_Ill_svaba_15274:HG2_PB_SVrefine2Falcon1plusDovetail_1862:HG2_PB_SVrefine2Falcon2Bionano_5957:HG2_PB_SVrefine2PB10Xhap12_8844:HG2_PB_SVrefine2PBcRplusDovetail_1770:HG2_PB_pbsv_12269:HG3_10X_allpass_2420:HG3_Ill_GATKHCSBGrefine_8123:HG3_Ill_SVrefine2DISCOVARDovetail_8920:HG3_Ill_manta_2794:HG3_Ill_scalpel_11769:HG3_Ill_svaba_15429:HG3_PB_SVrefine2Falcon1Dovetail_7435:HG3_PB_SVrefine2PBcRDovetail_5709:HG3_PB_pbsv_11941:HG4_Ill_GATKHCSBGrefine_8463:HG4_Ill_manta_2909:HG4_Ill_svaba_15324:HG4_PB_SVrefine2Falcon1Dovetail_7463:HG4_PB_SVrefine2PBcRDovetail_6163:HG4_PB_pbsv_12237;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0152207;ClusterMaxEditDist=0.173516;PBcalls=13;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-15;DistForward=2590;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=11:41822281-41822622;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=610.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:1:15:0:11:1/1:0:20:0:13:1/1:0:33:./.:1:17:.:.:.
chr11	42156149	HG2_Ill_SVrefine2DISCOVARplusDovetail_2062	TAAAACCTACTATTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCCGGGCGTAGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_22250:HG4_10X_allpass_2325:HG4_Ill_Krunchall_16939:HG2_PB_pbsv_12272:HG2_Ill_Krunchall_16681:HG2_Ill_tnscope_1366:HG4_PB_pbsv_12240:HG4_Ill_manta_2911:HG4_Ill_GATKHCSBGrefine_8466:HG2_PB_assemblyticsfalcon_4238:HG2_PB_SVrefine2PB10Xhap12_8847:HG2_PB_SVrefine2Falcon1plusDovetail_1865:HG2_Ill_SVrefine2DISCOVARplusDovetail_2062:HG2_Ill_GATKHCSBGrefine_8236:HG2_10X_allpass_1987:HG2_10X_SVrefine210Xhap12_8573:HG2_Ill_breakscan11_1772;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8573:HG2_10X_allpass_1987:HG2_Ill_GATKHCSBGrefine_8236:HG2_Ill_SVrefine2DISCOVARplusDovetail_2062:HG2_PB_SVrefine2Falcon1plusDovetail_1865:HG2_PB_SVrefine2PB10Xhap12_8847:HG2_PB_assemblyticsfalcon_4238:HG4_Ill_GATKHCSBGrefine_8466:HG4_Ill_manta_2911:HG4_PB_pbsv_12240;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0559006;ClusterMaxSizeDiff=0.0559006;ClusterMaxEditDist=0.0559006;PBcalls=6;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=27070;DistForward=-325;DistMin=-325;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=11:42156150-42156493;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=611.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:39:0|1:44:0:3:37:1|0:0:21:27:1:0/1:24:16:0/1:30:10:.:.:.
chr11	42464098	HG3_Ill_SVrefine2DISCOVARDovetail_8922	TGGTTTCTCTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGAACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_PB_HySA_18437:HG2_PB_assemblyticsPBcR_4090:HG4_PB_assemblyticsfalcon_4141:HG3_PB_assemblyticsfalcon_4248:HG2_PB_assemblyticsfalcon_4243:HG4_Ill_Krunchall_16946:HG3_PB_pbsv_11945:HG3_Ill_Krunchall_16375:HG2_Ill_Krunchall_16688:HG2_PB_HySA_22255:HG3_Ill_MetaSV_821:HG2_Ill_tnscope_1367:HG4_PB_pbsv_12241:HG4_PB_SVrefine2PBcRDovetail_6166:HG4_PB_SVrefine2Falcon1Dovetail_7466:HG4_Ill_scalpel_11275:HG4_Ill_manta_2912:HG4_Ill_SVrefine2DISCOVARDovetail_8686:HG4_Ill_GATKHCSBGrefine_8467:HG4_10X_allpass_2326:HG3_PB_SVrefine2PBcRDovetail_5712:HG3_PB_SVrefine2Falcon1Dovetail_7438:HG3_Ill_scalpel_11774:HG3_Ill_manta_2795:HG3_Ill_SVrefine2DISCOVARDovetail_8922:HG3_Ill_GATKHCSBGrefine_8125:HG3_10X_allpass_2421:HG2_PB_pbsv_12273:HG2_PB_SVrefine2PBcRplusDovetail_1774:HG2_PB_SVrefine2PB10Xhap12_8848:HG2_PB_SVrefine2Falcon2Bionano_5960:HG2_PB_SVrefine2Falcon1plusDovetail_1866:HG2_Ill_scalpel_11593:HG2_Ill_manta_3425:HG2_Ill_breakscan11_1773:HG2_Ill_SpiralSDKrefine_2687:HG2_Ill_SVrefine2DISCOVARplusDovetail_2063:HG2_Ill_GATKHCSBGrefine_8237:HG2_10X_allpass_1988:HG2_10X_SVrefine210Xhap12_8574;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8574:HG2_10X_allpass_1988:HG2_Ill_GATKHCSBGrefine_8237:HG2_Ill_SVrefine2DISCOVARplusDovetail_2063:HG2_Ill_SpiralSDKrefine_2687:HG2_Ill_breakscan11_1773:HG2_Ill_manta_3425:HG2_Ill_scalpel_11593:HG2_PB_SVrefine2Falcon1plusDovetail_1866:HG2_PB_SVrefine2Falcon2Bionano_5960:HG2_PB_SVrefine2PB10Xhap12_8848:HG2_PB_SVrefine2PBcRplusDovetail_1774:HG2_PB_pbsv_12273:HG3_10X_allpass_2421:HG3_Ill_GATKHCSBGrefine_8125:HG3_Ill_SVrefine2DISCOVARDovetail_8922:HG3_Ill_manta_2795:HG3_Ill_scalpel_11774:HG3_PB_SVrefine2Falcon1Dovetail_7438:HG3_PB_SVrefine2PBcRDovetail_5712:HG4_10X_allpass_2326:HG4_Ill_GATKHCSBGrefine_8467:HG4_Ill_SVrefine2DISCOVARDovetail_8686:HG4_Ill_manta_2912:HG4_Ill_scalpel_11275:HG4_PB_SVrefine2Falcon1Dovetail_7466:HG4_PB_SVrefine2PBcRDovetail_6166:HG4_PB_pbsv_12241;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0644122;ClusterMaxSizeDiff=0.0644122;ClusterMaxEditDist=0.0644122;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=13284;DistForward=25107;DistMin=13284;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=11:42464099-42464417;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=612.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:2:15:0:13:1/1:0:27:0:23:1/1:0:33:./.:2:10:.:.:.
chr11	42838553	HG3_Ill_250bpfermikitraw_15906	TTATATATCACATTATATATTCAATCCTGTAATATCCTCAACCAGAGGCTGGCAA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_4250:HG2_PB_pbsv_12278:HG3_PB_pbsv_11951:HG4_PB_assemblyticsfalcon_4145:HG4_Ill_svaba_15337:HG3_Ill_svaba_15441:HG3_Ill_manta_2797:HG3_Ill_Krunchall_16381:HG3_Ill_GATKHC_19508:HG3_Ill_GATKHCSBGrefine_8134:HG3_Ill_250bpfermikitraw_15906:HG3_Ill_150bpfermikitraw_15430:HG3_10X_allpass_2422:HG2_Ill_svaba_15288:HG2_Ill_manta_3426:HG2_Ill_SpiralSDKrefine_2694:HG2_Ill_Krunchall_16693:HG2_Ill_GATKHC_19661:HG2_Ill_GATKHCSBGrefine_8243:HG2_Ill_250bpfermikitraw_16370:HG2_Ill_150bpfermikitraw_15431:HG3_PB_assemblyticsfalcon_4257;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15431:HG2_Ill_250bpfermikitraw_16370:HG2_Ill_GATKHCSBGrefine_8243:HG2_Ill_GATKHC_19661:HG2_Ill_Krunchall_16693:HG2_Ill_SpiralSDKrefine_2694:HG2_Ill_manta_3426:HG2_Ill_svaba_15288:HG3_10X_allpass_2422:HG3_Ill_150bpfermikitraw_15430:HG3_Ill_250bpfermikitraw_15906:HG3_Ill_GATKHCSBGrefine_8134:HG3_Ill_GATKHC_19508:HG3_Ill_Krunchall_16381:HG3_Ill_manta_2797:HG3_Ill_svaba_15441:HG4_Ill_svaba_15337:HG4_PB_assemblyticsfalcon_4145;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0185185;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.037037;PBcalls=5;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=1219;DistForward=4758;DistMin=1219;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=54;REFWIDENED=11:42838554-42838661;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=613.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:34:./.:23:24:24:10:0|1:19:0:0:20:0/1:37:23:./.:.:.:.:.:.
chr11	43891829	HG3_Ill_scalpel_11784	TAAAATTAGATCAGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGAGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_845:HG4_Ill_Krunchall_16961:HG3_Ill_Krunchall_16397:HG3_PB_assemblyticsfalcon_4268:HG2_PB_assemblyticsPBcR_4105:HG2_PB_assemblyticsfalcon_4260:HG2_PB_pbsv_12284:HG4_PB_pbsv_12249:HG3_Ill_MetaSV_827:HG2_PB_HySA_22276:HG2_Ill_tnscope_1369:HG4_PB_assemblyticsfalcon_4157:HG4_PB_SVrefine2PBcRDovetail_6170:HG4_PB_SVrefine2Falcon1Dovetail_7472:HG4_Ill_scalpel_11284:HG4_Ill_SVrefine2DISCOVARDovetail_8692:HG4_Ill_GATKHCSBGrefine_8481:HG4_10X_allpass_2327:HG3_PB_pbsv_11958:HG3_PB_SVrefine2PBcRDovetail_5719:HG3_PB_SVrefine2Falcon1Dovetail_7446:HG3_Ill_scalpel_11784:HG3_Ill_manta_2799:HG3_Ill_SVrefine2DISCOVARDovetail_8927:HG3_Ill_GATKHCSBGrefine_8139:HG3_10X_allpass_2425:HG2_PB_SVrefine2PBcRplusDovetail_1779:HG2_PB_SVrefine2PB10Xhap12_8853:HG2_PB_SVrefine2Falcon2Bionano_5964:HG2_PB_SVrefine2Falcon1plusDovetail_1872:HG2_Ill_scalpel_11601:HG2_Ill_manta_3429:HG2_Ill_breakscan11_1774:HG2_Ill_SVrefine2DISCOVARplusDovetail_2070:HG2_Ill_GATKHCSBGrefine_8249:HG2_10X_allpass_1990:HG2_10X_SVrefine210Xhap12_8580:HG4_Ill_Spiral_981:HG3_Ill_Spiral_12768;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8580:HG2_10X_allpass_1990:HG2_Ill_GATKHCSBGrefine_8249:HG2_Ill_SVrefine2DISCOVARplusDovetail_2070:HG2_Ill_breakscan11_1774:HG2_Ill_manta_3429:HG2_Ill_scalpel_11601:HG2_PB_SVrefine2Falcon1plusDovetail_1872:HG2_PB_SVrefine2Falcon2Bionano_5964:HG2_PB_SVrefine2PB10Xhap12_8853:HG2_PB_SVrefine2PBcRplusDovetail_1779:HG3_10X_allpass_2425:HG3_Ill_GATKHCSBGrefine_8139:HG3_Ill_SVrefine2DISCOVARDovetail_8927:HG3_Ill_manta_2799:HG3_Ill_scalpel_11784:HG3_PB_SVrefine2Falcon1Dovetail_7446:HG3_PB_SVrefine2PBcRDovetail_5719:HG3_PB_pbsv_11958:HG4_10X_allpass_2327:HG4_Ill_GATKHCSBGrefine_8481:HG4_Ill_SVrefine2DISCOVARDovetail_8692:HG4_Ill_scalpel_11284:HG4_PB_SVrefine2Falcon1Dovetail_7472:HG4_PB_SVrefine2PBcRDovetail_6170:HG4_PB_assemblyticsfalcon_4157;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0878788;ClusterMaxSizeDiff=0.0878788;ClusterMaxEditDist=0.0878788;PBcalls=16;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=4430;DistForward=17427;DistMin=4430;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=11:43891830-43892180;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=614.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:1/1:0:25:1:23:1/1:0:30:0:21:1/1:0:50:0/1:2:16:.:.:.
chr11	43909593	HG3_Ill_GATKHCSBGrefine_8140	TGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCGCCTGGCAGTCTTTCTGTTTTTGAGACAGGGTCTGGCTCTGTCACCTAGGCTGGGGTGCAGTGGCACGATCTCAGCTCATTGCAACTTCTGCCTCCTGGGCTCAAGCCACCCTCCCACTTCAGCCTCCGAGTAGCTGGGATTACAGGTGTGCGCCACCACACCTGGCTAATTTTGTATTTTTGTTTGTTTGTTTGTTAGTGATGGGGTTTCGCCATGTTGCCCAGGCTGGCCTTGAACTCCTGGGCTCAAGTGATCTGCCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8854:HG4_PB_SVrefine2PBcRDovetail_6171:HG2_PB_HySA_22277:HG4_PB_pbsv_12250:HG3_PB_pbsv_11959:HG2_PB_pbsv_12285:HG3_PB_HySA_18454:HG4_PB_HySA_17815:HG2_Ill_tnscope_1370:HG4_Ill_scalpel_11285:HG4_Ill_manta_2913:HG4_Ill_GATKHCSBGrefine_8482:HG4_10X_allpass_2328:HG3_Ill_MetaSV_828:HG3_Ill_GATKHCSBGrefine_8140:HG3_10X_allpass_2426:HG2_Ill_manta_3430:HG2_Ill_GATKHCSBGrefine_8250:HG2_10X_allpass_1991:HG4_PB_SVrefine2Falcon1Dovetail_7473:HG4_Ill_SVrefine2DISCOVARDovetail_8693:HG3_PB_SVrefine2PBcRDovetail_5720:HG3_PB_SVrefine2Falcon1Dovetail_7447:HG3_Ill_SVrefine2DISCOVARDovetail_8928:HG2_PB_SVrefine2Falcon1plusDovetail_1873:HG2_10X_SVrefine210Xhap12_8581:HG2_PB_SVrefine2PBcRplusDovetail_1780;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_1991:HG2_Ill_GATKHCSBGrefine_8250:HG2_Ill_manta_3430:HG3_10X_allpass_2426:HG3_Ill_GATKHCSBGrefine_8140:HG3_Ill_MetaSV_828:HG4_10X_allpass_2328:HG4_Ill_GATKHCSBGrefine_8482:HG4_Ill_manta_2913:HG4_Ill_scalpel_11285;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00978793;ClusterMaxSizeDiff=0.00978793;ClusterMaxEditDist=0.206219;PBcalls=13;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-306;DistBack=17427;DistForward=-266;DistMin=-266;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=53;REFWIDENED=11:43909583-43909941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:29:1|0:2:35:39:0:1|0:0:25:44:0:0/1:34:16:0/1:22:9:.:.:.
chr11	44400534	HG4_Ill_SVrefine2DISCOVARDovetail_8696	ACAGACACACACAGGCACGGGTGGGTGTTCCTCACACCCAGACACACACAGGCAGTGAGATGTCCCTGTGTACC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8583:HG3_PB_HySA_18458:HG4_PB_HySA_17819:HG3_PB_pbsv_11961:HG2_PB_pbsv_12287:HG4_PB_pbsv_12252:HG2_PB_HySA_22284:HG4_Ill_svaba_15348:HG4_Ill_GATKHCSBGrefine_8484:HG4_Ill_250bpfermikitraw_16222:HG4_Ill_150bpfermikitraw_15588:HG3_Ill_svaba_15455:HG3_Ill_GATKHCSBGrefine_8142:HG3_Ill_250bpfermikitraw_15921:HG3_Ill_150bpfermikitraw_15449:HG2_Ill_svaba_15300:HG2_Ill_SpiralSDKrefine_2702:HG2_Ill_250bpfermikitraw_16388:HG2_Ill_150bpfermikitraw_15448:HG4_PB_SVrefine2PBcRDovetail_6172:HG4_PB_SVrefine2Falcon1Dovetail_7474:HG4_Ill_SVrefine2DISCOVARDovetail_8696:HG3_PB_SVrefine2PBcRDovetail_5721:HG3_PB_SVrefine2Falcon1Dovetail_7448:HG3_Ill_SVrefine2DISCOVARDovetail_8929:HG2_PB_SVrefine2PBcRplusDovetail_1781:HG2_PB_SVrefine2PB10Xhap12_8855:HG2_PB_SVrefine2Falcon2Bionano_5965:HG2_PB_SVrefine2Falcon1plusDovetail_1874:HG2_Ill_SVrefine2DISCOVARplusDovetail_2072;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8583:HG4_PB_SVrefine2PBcRDovetail_6172:HG4_PB_SVrefine2Falcon1Dovetail_7474:HG4_Ill_SVrefine2DISCOVARDovetail_8696:HG3_PB_SVrefine2PBcRDovetail_5721:HG3_PB_SVrefine2Falcon1Dovetail_7448:HG3_Ill_SVrefine2DISCOVARDovetail_8929:HG2_PB_SVrefine2PBcRplusDovetail_1781:HG2_PB_SVrefine2PB10Xhap12_8855:HG2_PB_SVrefine2Falcon2Bionano_5965:HG2_PB_SVrefine2Falcon1plusDovetail_1874:HG2_Ill_SVrefine2DISCOVARplusDovetail_2072;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0266667;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.162162;PBcalls=14;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-73;DistBack=44548;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=307;REFWIDENED=11:44400535-44400914;PctSeqSimilarity=0.922;PctSizeSimilarity=0.9865;PctRecOverlap=0.0667;SizeDiff=-1;StartDistance=-69;EndDistance=-70;GTMatch=0;TruScore=65;MatchId=616.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:47:1/1:1:21:5:24:0/0:34:1:25:0:0/0:35:1:./.:.:.:.:.:.
chr11	44523393	HG3_Ill_GATKHCSBGrefine_8143	TGGGCGACAGAGTGAGACACTTGAGCCAATACGGTGCCACTGCGCTCCAGCC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_15449:HG3_PB_HySA_18461:HG2_PB_HySA_22288:HG3_PB_pbsv_11963:HG4_Ill_GATKHC_19638:HG4_Ill_GATKHCSBGrefine_8486:HG3_Ill_GATKHC_19528:HG3_Ill_GATKHCSBGrefine_8143:HG2_PB_pbsv_12289:HG2_Ill_GATKHC_19684:HG2_Ill_GATKHCSBGrefine_8252:HG4_Ill_manta_2914:HG2_Ill_manta_3431:HG3_Ill_Spiral_12770:HG2_Ill_Spiral_846:HG4_PB_HySA_17823:HG4_PB_pbsv_12254:HG4_Ill_svaba_15349:HG3_Ill_svaba_15456:HG2_Ill_svaba_15301:HG2_Ill_breakscan11_1775;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8252:HG2_Ill_GATKHC_19684:HG2_PB_pbsv_12289:HG3_Ill_GATKHCSBGrefine_8143:HG3_Ill_GATKHC_19528:HG4_Ill_GATKHCSBGrefine_8486:HG4_Ill_GATKHC_19638;NumExactMatchSVs=7;ClusterMaxShiftDist=0.148936;ClusterMaxSizeDiff=0.138614;ClusterMaxEditDist=0.319149;PBcalls=6;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=33476;DistForward=-6;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=53;REFWIDENED=11:44523362-44523465;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=617.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:52:./.:5:14:0:23:./.:3:6:1:10:./.:1:10:./.:.:.:.:.:.
chr11	44743189	HG2_Ill_GATKHC_19686	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCGGGGTGTATATAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8585:HG4_Ill_svaba_15351:HG4_Ill_SVrefine2DISCOVARDovetail_8698:HG4_Ill_Krunchall_16969:HG4_Ill_GATKHC_19640:HG4_Ill_GATKHCSBGrefine_8491:HG4_Ill_250bpfermikitraw_16225:HG4_Ill_150bpfermikitraw_15590:HG4_10X_allpass_2329:HG2_Ill_svaba_15302:HG2_Ill_scalpel_11605:HG2_Ill_SVrefine2DISCOVARplusDovetail_2074:HG2_Ill_Krunchall_16708:HG2_Ill_GATKHC_19686:HG2_Ill_250bpfermikitraw_16391;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8585:HG4_Ill_svaba_15351:HG4_Ill_SVrefine2DISCOVARDovetail_8698:HG4_Ill_Krunchall_16969:HG4_Ill_GATKHC_19640:HG4_Ill_GATKHCSBGrefine_8491:HG4_Ill_250bpfermikitraw_16225:HG4_Ill_150bpfermikitraw_15590:HG4_10X_allpass_2329:HG2_Ill_svaba_15302:HG2_Ill_scalpel_11605:HG2_Ill_SVrefine2DISCOVARplusDovetail_2074:HG2_Ill_Krunchall_16708:HG2_Ill_GATKHC_19686:HG2_Ill_250bpfermikitraw_16391;NumExactMatchSVs=15;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=20931;DistForward=-13;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=11:44743190-44743266;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:19:0|1:30:4:4:13:./.:0:21:19:6:0/1:13:28:./.:.:.:.:.:.
chr11	45132763	HG2_Ill_SVrefine2DISCOVARplusDovetail_2075	TCCATCCCACCCTGTCCCTCCACCACTTCCCCTCCCATCTCTCTCCCAGCATGTCTCCCTATTTTTGGTTCTTGATATTTACTCGTCTTCTTTGCCATCTCTGGACTTACGGGGTGCCCTCTATGCCAAACGGCATTCCACCCAACATTGCTTCGGACCAACGAACCCATTTCACAGCGACAGGACAACAGGGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8586:HG4_Ill_Krunchall_16974:HG2_Ill_Krunchall_16715:HG2_PB_HySA_22301:HG4_PB_pbsv_12264:HG4_PB_SVrefine2PBcRDovetail_6178:HG4_PB_SVrefine2Falcon1Dovetail_7480:HG4_Ill_svaba_15355:HG4_Ill_scalpel_11292:HG4_Ill_manta_2916:HG4_Ill_SVrefine2DISCOVARDovetail_8699:HG4_Ill_GATKHCSBGrefine_8493:HG4_Ill_Cortex_583:HG4_Ill_250bpfermikitraw_16229:HG4_Ill_150bpfermikitraw_15593:HG4_10X_allpass_2330:HG2_PB_pbsv_12297:HG2_PB_SVrefine2PBcRplusDovetail_1786:HG2_PB_SVrefine2PB10Xhap12_8860:HG2_PB_SVrefine2Falcon2Bionano_5970:HG2_Ill_svaba_15309:HG2_Ill_scalpel_11613:HG2_Ill_manta_3433:HG2_Ill_breakscan11_1777:HG2_Ill_SpiralSDKrefine_2705:HG2_Ill_SVrefine2DISCOVARplusDovetail_2075:HG2_Ill_GATKHCSBGrefine_8254:HG2_Ill_Cortex_1395;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8586:HG4_PB_pbsv_12264:HG4_PB_SVrefine2PBcRDovetail_6178:HG4_PB_SVrefine2Falcon1Dovetail_7480:HG4_Ill_svaba_15355:HG4_Ill_scalpel_11292:HG4_Ill_manta_2916:HG4_Ill_SVrefine2DISCOVARDovetail_8699:HG4_Ill_GATKHCSBGrefine_8493:HG4_Ill_Cortex_583:HG4_Ill_250bpfermikitraw_16229:HG4_Ill_150bpfermikitraw_15593:HG4_10X_allpass_2330:HG2_PB_pbsv_12297:HG2_PB_SVrefine2PBcRplusDovetail_1786:HG2_PB_SVrefine2PB10Xhap12_8860:HG2_PB_SVrefine2Falcon2Bionano_5970:HG2_Ill_svaba_15309:HG2_Ill_scalpel_11613:HG2_Ill_manta_3433:HG2_Ill_breakscan11_1777:HG2_Ill_SpiralSDKrefine_2705:HG2_Ill_SVrefine2DISCOVARplusDovetail_2075:HG2_Ill_GATKHCSBGrefine_8254:HG2_Ill_Cortex_1395;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0103093;ClusterMaxSizeDiff=0.0103093;ClusterMaxEditDist=0.0103093;PBcalls=8;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-193;DistBack=-194;DistForward=118093;DistMin=-194;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=11:45132764-45132958;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:32:0|1:27:1:1:28:1|0:0:27:74:0:0/1:26:22:./.:.:.:.:.:.
chr11	45429846	HG2_PB_SVrefine2PBcRplusDovetail_1787	AGCCAGAATGTGGGGTCACACGTGGTCTTTTGTCTTCTCCCTGAACATTGGGTGTCTTAAGGAAAGGGATTAAATTTTAGTTCCCTCTTCATATCTCAAACAGGGCCTGTCTCATTACAGGTGCCCTGGAACAGTCATTGAACAAGAACTGGAGAAGGAGATGCAACCTGTGAAAGGCAAAGTCTCCACCTTCTTCCACACAGCCCAGCTCTGGTTCCCACAGTCACCACTGTGGAGGGTCAGCCTGGCTCCCCAGCCCCAGAGTGGCCTGGCCTGACTCACTGATCATGCAGACAGGATGTCAGGATTCCCTGGAAGCTCAGGGGCAGGCCATAGGGACTCCACTTGCCACCCTGACTGACTCAATGTGTCCAGTCTGAGTGTCCCCTGAAGAAATACATCATCTGCCATCTGAGGGCAGGCAGCCAGGCACTGACCTAGGATCAGGCCTTCTCACTTGTAGCTGGCTGCCTCCATCCTTTTGAGCTGGGAAGTTGTGAAGAATTTGTTAAGAACCAGAAAGAACTTGTTTTGGGGACCACAGGCACGTGTCAGACCCAGGTCCCAAAGCCCTGGGCTTGCAGAGCCAGGTGGGCTGTGGGAATGAGACATGGCAGGGGCAGGGTTCCTGCTGAATTGGGAGAGCCCTGTCCAGCACCAGCCAGTGAAGCCCGGTGAGTTAGCACCCAGGAAAGCCAGACCTTCTGATTTGTATGTCAATCTCCTGATATTGAAAAATCGGCTCAAGACATTTTTTGACCCTGAAAGGTAAAGAAAACCAGGCAGCTGGTCCAACCTGTCCTGTGGCTGTCGGCTTGACCTTTGTGTTAGGTTAGCATCATACCAAGCCAAGTGCACAGGTCAAGGTGTTGTGTGAGATGCAGCTCATCTGGCACATGGGGGTGGGCATTTCAAAGTCACGGTTGAGTGGATGAGTATGTGAAAGCTGCGTATCCGTCATGGATTAAGTAAACAGTGTCGAATGTCAGGAGCCATATCCGAGTTTCATTTTTACAATCATGTCAGCATCGGGTGCAGGTTGCTCATGTCGGAGGCAGGCACGAGGTACGCACATCAGCCATATGGTAGGTGCTGCTGTGTGTTACATGTGTATGTCGGTATCAGGTGTGGGGCCTCGGTTCACATGCTCATGTAAAGCGTGCCTGGCAACCTGTCTGGTACCCAGCCCCTCCTCCCAGCACCCCACTCCCCTCTCACAGGAATGGCTGCCTCTCCTGCTCAGGGCCTGTCCAGGTGACATAGCGGAAGCCCCTGCCTTTCATCTCCAGCCCCATAAGGTTGGGAGCCCCAAGCACATCCCAGCTCAGGGAATAAAGAGGCCCCTTTGTCGGACGCTACAGCAGACTCCCTGGTCCCCTCCTCCAGCCCTACCTCACCTATCCGTGTGCCCCACTGACCACAATCGCACTCGACCTGAGTCATGCTCCCTGGAGAAGGGGCCTGATGTCATCGAGAGCTGGCAGAGGAGAGGCATAGACAGGCTGCTGCTGTTAAAAATGACACCTCTGCAGGCTGCTGTGATACTGTGTGTGGGCCAGCTCTGTCCTCTATCTTCTCCTCTCCCTGTGGCACTGCCCTAGCAGGGCCTGCCTGCATTGCTCATTGCTCCAGGCTTTATGTTTGGAGAAGAGAGAGAGAGAGATGAACTGGGGCCCAGGAAAATATGCAAGTGGGGGCTGTGCATGAGGACCATGGCTCTGCTGCTTACCAGCTCTGGGAGCTTGAGCAAATTGCTTAAGCTCTTCTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8588:HG3_PB_pbsv_11970:HG2_Ill_Krunchall_16717:HG2_PB_assemblyticsfalcon_4280:HG3_PB_assemblyticsfalcon_4282:HG2_Ill_tnscope_1371:HG3_PB_SVrefine2PBcRDovetail_5727:HG3_PB_SVrefine2Falcon1Dovetail_7454:HG3_Ill_SVrefine2DISCOVARDovetail_8934:HG3_Ill_MetaSV_830:HG3_10X_allpass_2427:HG2_PB_pbsv_12298:HG2_PB_SVrefine2PBcRplusDovetail_1787:HG2_PB_SVrefine2Falcon2Bionano_5971:HG2_PB_SVrefine2Falcon1plusDovetail_1879:HG2_Ill_breakscan11_1778:HG2_Ill_SpiralSDKrefine_2707:HG2_Ill_SVrefine2DISCOVARplusDovetail_2077:HG2_10X_allpass_1992;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8588:HG3_PB_SVrefine2PBcRDovetail_5727:HG3_PB_SVrefine2Falcon1Dovetail_7454:HG3_Ill_SVrefine2DISCOVARDovetail_8934:HG3_Ill_MetaSV_830:HG3_10X_allpass_2427:HG2_PB_pbsv_12298:HG2_PB_SVrefine2PBcRplusDovetail_1787:HG2_PB_SVrefine2Falcon2Bionano_5971:HG2_PB_SVrefine2Falcon1plusDovetail_1879:HG2_Ill_breakscan11_1778:HG2_Ill_SpiralSDKrefine_2707:HG2_Ill_SVrefine2DISCOVARplusDovetail_2077:HG2_10X_allpass_1992;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00282885;ClusterMaxSizeDiff=0.00282885;ClusterMaxEditDist=0.00282885;PBcalls=9;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1767;DistBack=4826;DistForward=-1765;DistMin=-1765;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=11:45429847-45431616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=620.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:35:0|1:34:1:1:31:0|1:53:0:0:17:0/1:53:13:0/1:145:46:1692:.:.
chr11	47057589	HG2_PB_SVrefine2PBcRplusDovetail_1790	TATATATATATATATATATTATATATATATAATATATAAATTATATATATTATATTATATATTATATATTATATATAATGTATATTATAATATACAATATAATATATAATATATTATATATAATGCATATTATAATATATAAATATATATTTATATTATATATTATATATTATATTAATATATAATATATATAATATATTATATTTATATATTATATATTATATAATATATATATTATATATTATATTTATATATTCAACAAGATTGGGGGAGACTCTAAAATTGAAAACAAACAAGTGAAGCAAATTGTATTTCAAATGAATAATATACCGTACTGCAGGGGGTTGGAGAAACTAATCTAAGGAACATAATATTTGGACTATATACCCTCAGGCTAAAACAACTCTAAACAAGTATTAAACTCTAATTAGTAGGCTTCTTTTTCACAGAGGAATGGGTTAGCTAGCTCAGTACATTTTAGGATTAAGCAAATAAGTAAATATGTTATAGATAATAGGAGCCTTTTTCTCACTTTAGAAAAAGGACATTTCAGATATGGAAAGGGAAGATGATAGAATGTAACCTGTAGTGTTGAACTGGAATTGAATCAGTGTGAGCTCATAGATTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGAGACGCAGTCTCTTCTCTGTCACCCAGGCTGGAGTGCAGTGGCACAACCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAATCAATTCTCCTCCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGAGTGCCACCACGCCCAGCTAATTTTTTTTATTTTTCTTAGAGGGGTGGAGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCTGGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCACGCCCAGCCTATTCTTTACTAAAAACAACTGGGCTTCTTGGATAAATGGCTGGCTCCAGGGTGAAGTAGGGAAAGAACAAGATGATCCTGGAACATCTTATTCTATCAAAAAAGGAAGGAAGTGATCAGAGAATTATGTAGATGTGTCAAAAGGACATAGAAGTCAGCTTGAAGGGCTTCCATGGCAAAATATGGGATCATTTGAACATAAAAATATATAATGATAGTAAAGGATTATAACCTATTGAATAAAGAATCCATGAGTCCACAATGATATAAATAAATAAGAAGGGAAAGCTCTTCCTTATTGTAGAAGGTCGACTTAAAAACGTAGATGAAACGACGTAGTTGGAAAAAGATCACCATTTGGCAAAACCTTCATATTCATTGTTGGTTCTGGCAACAATTATTATTATTATTATTTTTTTTTTTTAATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCACAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCTGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTCAACCCTGAGTGGATACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCACGTCTACCTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCCTTCCCCCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCCTTCTCAATGAGCTGTTGGGTACACCTCCCAGATGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGGCTGACCCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCCGGGCGGGGGGCGGACCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCAGAGGGACTCCTCACTTCCCAGTAGGGGCGGCCGGCCAGAGGCGCCCCTCACTTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCTGGACGGAGTGGCTGGCCGGACAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCCGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACTGGGAGGCTGGCCGGGCGGGGGTCTGACCCCCCCACCTCTCTCCCGGACGGGGTGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTGCCGGACGAGGTGGCTCCCGGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCTGCTGGGCGGAGGGGCTCCTCACTTCTCAGATGGGGCGGTTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCTGGGCAGAGACGCTCCTCACATCCCGGACGGGGCGGCAGGGCAGAGGTGCTCCCCACATCTCAGAGGATGGGCCGCCGGGCAGAGACGCTCCTCACTTCCCAGATGGGATGGCGGCCGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCTGCTGGGAGGTGAAGGTTGTAGCGAGCCGAGGTCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACGGAGTGAATGAGACTCCGTCTGCAATCCCGGCACCTCAGGATGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCAGCCAACACAGCGAAACCCCGTCTCCACCAAAAAAATACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCCAGGCAGTTGGCAGGCTGAGGCAGGAGAATCAGGCAGCAGTACCGTCCAGCTTCAGCTCCGCATCAGAGGGAGACCGTGGAGAGAGGGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGAGGGAGCTCTGGTACTTTCTTATAGCCACACGAACAGATAAAGACTGTACCTATCTGTTGGCTGGGCGCAGTGGCTCACGTCTGTAATCCCAGCACTTCGGGAGGCTTAGACAAGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGATGAAACCCCGTCTCTACTAAAAATACAAAAAATTTAGCTGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCACGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCAGTCCGTCCTGGGCGAAAGAGCGAGACTCCGTCTCAAAAAAACAAACAAACAAGAGGTCCAGAGTGTGACAACATGGCCTTGCAACCTTGTGCTCAGGGACCCTGGAGGCAGTCCTTCATAGGTCTGCTGGAACTCGCCAACAATTATTAATAGATACTAAAATTTGTGAATGAAAGTTTGAAGAGTAACTATATATTTCCACAGACTCAAAATGTCTTCCCACAGGATACTTATCCATTACAAAGGCTAACTTTATAGTGGCAAAACCTGGCAGATGCTGCTCTAACTAAAGAATCAAAGTTAACATCCCCAGTAATTAGACTAATCAGCAAGTGCCCCCAGATGTGATGCACTGAGAGGAACTCAGCATCACCTTTGTGATAATCCTGCCAAAGGGGCATAACCTGAATTGAATTATGAGGGGGCATCAGACACACCCAAATTCAAGAACATTCTACAAAGTAACCTGTACAACAGGTTTTCAAATAACTTTGTTTCATTTAACATCATTTTCATTGTAACTATTTTGTGGTTTAAGATCATTTTATGAAGAGCAAGAGGCAGGGAGAGATGGCAGGGAGGACAACTAGAGCACTTCTACACCCACCAGGAGAATAGACTCCCTCCCTGCTTCCTGTTGTGCTGGACCCCTATTGACTTCAGTAGGGATGGCACCATGTTTGCGAGGCTGAAAAAGAGACATGGAGCCAGCAAATGAAACATAAGGTTTTTTGAGGGGATTTACATACAGGGCAGTCCAGGGGCAGCATGCTGAACAGGAGAACTGCTACCACTTATAAAAAAGCATGCAGTTTATACAGCATTTTCACTTAGCCCCTCGACCCCGGCAATCTCCACCTGGCAACCTTCATCCAACCCAAAACAAAGGGCCTCGAACCCCTGTATGGCCTGTGATCCATGGGATGGATCAGATGGTTCAGATGTTCCTCATAGATAAAGAATGAATCTCTGGGTTGGCCATTCCCAAATTCCTTCACTCAGAACTCTGAACACACATTCATCTTAGACCACAGGGTCATTCTCAGGGTATGCTTCAATTATTTATGACAGGTGCATCTACCATACACCTGCTCCCCAAGTGGCTCCCTTGTACTATGGCAGCGGTGGTGGGGAGGGATTTGTGTAAACTCTGCCCTGGAGGGTGGGGAAGGTGAAGGTTGGATGTAAAATGGCAGCAGCTGGGGCTGGCAGTGGTGCTGCTGGGTGCTACAGGGCTTGTAGGGTTCCATAAAGAGGGCTGAGAAGGTGTTGACTTTGTCTGCCCCCTGCACCTCATGGGGAAACAGTGGCAGTTTCACAGTGCAAAAGTCTTTATAAGTGTTCTCCGTCTGGTTCAGATACTTGGCCTGGATCTTGTGTCAGGCCTCACATATCTTTCAGGATTTTCAGGGTTGGGGAAGAGAAGCTGGGTGATGATGATGTTGTATGTGTCAATCTTGTACTTGGCCAGCTCCTGGATCAGTCACTCTGTCTCATACAGGGATAGAACTCAGGGATATATTCGCAGATGATACAGGTAATCTACTCAGGGCCCTTGAACTGTTTGCTGACAAAGTAGATGATGGACAGTGTCTACTTCAGCATGGAGGACAGCACGTCTGTGTTCATGTCCCCAAGACCTAGAACGTTGCATGTCTGTAAGATAAAGGGGCTGATCTGGTTCTTGATCTGCTGAGTGTCATGTCAACCACCACCACTGAGAAGTTCATGCCCTTCACCAGCCTCATGACCTCAGCATAGCTCATGGCCTCATTGATGCCGGGAAAGGCGCTCATGGCTTCCTGCATCAACTTCTTGCTCATGCTCAGCATGTTTTCCTTCTCAAAGAACTCACTGGGCAGCTATGCTGCACCCTGGCTGGGGTCAATTTCCACAGTGAAGAGGTTGTCAGAGCCTTTGACCTTGGTAGGCACCTTTGAGAACTTCTGGTCAAAACCATCTGAGATGTTGTGGGCTAGGTCTGTGGAGATGATCAGAATACTTTCATGCCCTTTTGATAGCTGGATGGCCAGGCTGCAACTGCAAGTGGTCTTTCCCATGCCACCTTTGCGCCAGCAAGGATCCACTTAACTTAAGGCTGCATTTCTCAATGATGTTGCTAAACCTAGGCTCCAGTGGCTCTTGGAGGCTGACTTTGGGAGACTGAGGTGGAAGGATCACTTGAAGCCAGGAGTTTGAGATCGGCCTGGAAGTGAGACCCCATCTCTACAAAAAAAAATTTTTTTAAATAGACAAGCATGATTGTGTGTGCTTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCTCAGGAGTTCAAGGCTACAGTGAGCTATGAT	AAAGTGGGATAGTGGAA	20	PASS	ClusterIDs=HG2_Ill_Krunchall_16725:HG3_PB_pbsv_11976:HG4_PB_pbsv_12268:HG2_PB_pbsv_12302:HG3_10X_allpass_2430:HG4_10X_allpass_2331:HG2_Ill_tnscope_1372:HG4_PB_SVrefine2PBcRDovetail_6181:HG4_PB_SVrefine2Falcon1Dovetail_7483:HG3_PB_SVrefine2PBcRDovetail_5732:HG3_PB_SVrefine2Falcon1Dovetail_7457:HG2_PB_assemblyticsPBcR_4130:HG2_PB_SVrefine2PBcRplusDovetail_1790:HG2_PB_SVrefine2PB10Xhap12_8864:HG2_PB_SVrefine2Falcon2Bionano_5975:HG2_PB_SVrefine2Falcon1plusDovetail_1883:HG2_Ill_SVrefine2DISCOVARplusDovetail_2085:HG2_10X_SVrefine210Xhap12_8592:HG2_PB_PB10Xdip_5792:HG2_10X_allpass_1993:HG3_Ill_MetaSV_833:HG4_PB_assemblyticsfalcon_4180:HG3_PB_assemblyticsfalcon_4292:HG2_PB_assemblyticsfalcon_4287:HG4_Ill_Krunchall_16986;NumClusterSVs=25;ExactMatchIDs=HG2_PB_PB10Xdip_5792:HG2_10X_SVrefine210Xhap12_8592:HG2_Ill_SVrefine2DISCOVARplusDovetail_2085:HG2_PB_SVrefine2Falcon1plusDovetail_1883:HG2_PB_SVrefine2Falcon2Bionano_5975:HG2_PB_SVrefine2PB10Xhap12_8864:HG2_PB_SVrefine2PBcRplusDovetail_1790:HG2_PB_assemblyticsPBcR_4130:HG3_PB_SVrefine2Falcon1Dovetail_7457:HG3_PB_SVrefine2PBcRDovetail_5732:HG4_PB_SVrefine2Falcon1Dovetail_7483:HG4_PB_SVrefine2PBcRDovetail_6181;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0037634;ClusterMaxSizeDiff=0.0037634;ClusterMaxEditDist=0.0037637;PBcalls=16;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-6101;DistBack=-538;DistForward=-5576;DistMin=-5576;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:47057589-47063706;PctSeqSimilarity=0.9538;PctSizeSimilarity=0.9997;PctRecOverlap=0.9977;SizeDiff=-2;StartDistance=-1;EndDistance=13;GTMatch=0;TruScore=98;MatchId=621.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:104:./.:8:22:0:20:1/1:0:29:0:11:1/1:0:13:1/1:0:421:6291:.:.
chr11	47887668	HG2_PB_assemblyticsPBcR_4143	AGGATTACAGGCATGCACCACCACCCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCTCCATGTTTGTCAGACTGCTCTCGAACTCCTGACCTCAGGTGATCCACCTGTCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGACACCGTGCCTGGCCGGAATTTTCTTTTTCCTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGGGATTTCCCTGCCTCAGCCTCTCGAGTAGCTGGGACTATAGGCGTGTGCCACCAGGCTTGGCTAATTTTTTGTATTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAGGATGGTCTTGATCTCCTGACCTCGTGATCAACCCACCTCGGCCTCCCAAAGTGCTTGGATTACAGGCGTGAGCCACTGCGCTCAGCCCAGAATTTTCTTAAAAGCTAAAAGCACGCAGGGGTAGGTTGGAGAGAGAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_11986:HG3_Ill_GATKHCSBGrefine_8153:HG2_Ill_GATKHCSBGrefine_8265:HG4_PB_SVrefine2Falcon1Dovetail_7490:HG3_PB_SVrefine2Falcon1Dovetail_7465:HG3_PB_SVrefine2PBcRDovetail_5740:HG3_Ill_manta_2801:HG3_Ill_SVrefine2DISCOVARDovetail_8950:HG2_PB_assemblyticsPBcR_4143:HG2_PB_SVrefine2PBcRplusDovetail_1798:HG2_PB_SVrefine2Falcon1plusDovetail_1890:HG2_Ill_manta_3434:HG2_10X_SVrefine210Xhap12_8602:HG3_Ill_Spiral_12788:HG2_Ill_tnscope_1373:HG2_Ill_Spiral_848:HG2_PB_pbsv_12310:HG3_10X_allpass_2431:HG2_10X_allpass_1994:HG3_Ill_MetaSV_835:HG4_PB_assemblyticsfalcon_4195:HG3_PB_assemblyticsfalcon_4304:HG2_PB_assemblyticsfalcon_4302;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8602:HG2_Ill_manta_3434:HG2_PB_SVrefine2Falcon1plusDovetail_1890:HG2_PB_SVrefine2PBcRplusDovetail_1798:HG2_PB_assemblyticsPBcR_4143:HG3_Ill_SVrefine2DISCOVARDovetail_8950:HG3_Ill_manta_2801:HG3_PB_SVrefine2PBcRDovetail_5740;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0114068;ClusterMaxSizeDiff=0.0114068;ClusterMaxEditDist=0.0114068;PBcalls=11;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-526;DistBack=15252;DistForward=-527;DistMin=-527;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:47887668-47888194;PctSeqSimilarity=0.9991;PctSizeSimilarity=0.9981;PctRecOverlap=0.9981;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=622.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:20:0|1:14:2:1:19:0|1:60:0:0:33:0/1:53:14:0/1:50:11:.:.:.
chr11	48120061	HG3_Ill_GATKHCSBGrefine_8154	TTTTATCTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCCCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_11988:HG2_PB_assemblyticsPBcR_4146:HG4_PB_assemblyticsfalcon_4198:HG3_PB_assemblyticsfalcon_4307:HG2_PB_assemblyticsfalcon_4306:HG4_Ill_Krunchall_16997:HG3_Ill_Krunchall_16425:HG2_Ill_Krunchall_16735:HG2_PB_HySA_22328:HG2_Ill_Spiral_849:HG2_PB_pbsv_12312:HG4_PB_HySA_17865:HG4_PB_pbsv_12277:HG4_PB_SVrefine2Falcon1Dovetail_7492:HG4_Ill_scalpel_11313:HG4_Ill_manta_2917:HG4_Ill_GATKHCSBGrefine_8500:HG4_10X_allpass_2332:HG3_PB_SVrefine2PBcRDovetail_5742:HG3_PB_SVrefine2Falcon1Dovetail_7467:HG3_Ill_scalpel_11812:HG3_Ill_manta_2802:HG3_Ill_SVrefine2DISCOVARDovetail_8951:HG3_Ill_GATKHCSBGrefine_8154:HG2_PB_SVrefine2PBcRplusDovetail_1800:HG2_PB_SVrefine2PB10Xhap12_8873:HG2_PB_SVrefine2Falcon2Bionano_5984:HG2_PB_SVrefine2Falcon1plusDovetail_1892:HG2_Ill_scalpel_11623:HG2_Ill_manta_3435:HG2_Ill_SpiralSDKrefine_2719:HG2_Ill_SVrefine2DISCOVARplusDovetail_2100:HG2_Ill_GATKHCSBGrefine_8266:HG2_10X_allpass_1995:HG2_10X_SVrefine210Xhap12_8604:HG2_Ill_breakscan11_1780:HG3_Ill_MetaSV_836:HG2_Ill_tnscope_1374;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8604:HG2_10X_allpass_1995:HG2_Ill_GATKHCSBGrefine_8266:HG2_Ill_SVrefine2DISCOVARplusDovetail_2100:HG2_Ill_SpiralSDKrefine_2719:HG2_Ill_manta_3435:HG2_Ill_scalpel_11623:HG2_PB_SVrefine2Falcon1plusDovetail_1892:HG2_PB_SVrefine2Falcon2Bionano_5984:HG2_PB_SVrefine2PB10Xhap12_8873:HG2_PB_SVrefine2PBcRplusDovetail_1800:HG3_Ill_GATKHCSBGrefine_8154:HG3_Ill_SVrefine2DISCOVARDovetail_8951:HG3_Ill_manta_2802:HG3_Ill_scalpel_11812:HG3_PB_SVrefine2Falcon1Dovetail_7467:HG3_PB_SVrefine2PBcRDovetail_5742:HG4_10X_allpass_2332:HG4_Ill_GATKHCSBGrefine_8500:HG4_Ill_manta_2917:HG4_Ill_scalpel_11313:HG4_PB_SVrefine2Falcon1Dovetail_7492;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0625;ClusterMaxSizeDiff=0.0625;ClusterMaxEditDist=0.0625;PBcalls=16;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=49712;DistForward=-280;DistMin=-280;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=11:48120062-48120380;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=623.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:50:./.:0:0:0:0:./.:0:2:0:2:1/1:0:45:./.:2:19:.:.:.
chr11	58166981	HG2_Ill_SpiralSDKrefine_2774	TAGGTACTAAAGATTTTATTTTATTTTATTTTTTATTTATTTATTTTTTTTTTTAATTGAAATTGAATTTATTGGAAGCAGATACAGTTCTCTGGGGAGAAAAATAATCTTAAAAATGACAAATATTTGAACTAGCAAAATGCATCTTATAGCAATACCTTAAAAACTATAATATTAAAAACTGTTTGGCAGAGAACTAATTATTTTTCAGTCATACATGTAAATTAAAGTCCCACTTGGTTTTGCCTAAGGTAAGTCACGCTTAACTGAGTACTGGCTGTTTGGCTTTGTGCTCATGTGGCCCCAGGCCCTGAAGGGCTTTGCATATTATTGGGGCTCTGTAGGTGAATCAGTTATGGCCTTTGTCTCAAGTCCAAGTGGGAATCACCAGAATGTCTTAACTTTTGGCACAAAAGAGGCTTCAGTTTATACAGACTATCAGTTTGTACCCCGACTATTCACAGGATCCAGCAAGAATAGGATAGAGAAAGGTGCCTTATATGTGGCTGAAGACTTATTTTTCTGTATTCCTTGACCTTCCTTTTTCCCCCTTTCTGTAAGCAGGGGAAAAACATTTGCTGTAGCACCAGACATACAACTCAGTCCCCTTTCATCCTGCTATGTAGGTATAGGTACATCTTTCTCATTAACTCTCCTACTTCCCTTGTCATACAAAGAGATGTTTTTCTTCCTGGGAAGTAGCAGGGTAGTTTTTTGGGATATTTTAGCTCTGAGATGAACAGCTTCTTTCTGAGATCTTGTCAAAGATAATCTCCAGGGAAGCACGCAGTTTTGTACACCACTATTGTTATTTCTCTTCTCCCAGGGTTTTGTTTACAAAGGAATTTTGTGTAATTATGATTTCCCATAGACTTTTCTGATAGTTTATGATACATGGAGACATAAGCAATTGAATGGGGGTGGGGAGGGATTCAATTAAAAACTAAAAGGACAGTCCAAGAATAATGCTGAGGGCCATGGGCAAAAAAGATTTGGCTCTAGAATTCACTAAGTTTCAAAGGTAAAAGAAGCATGAGAACGTGCCACTATTCATCACCTTCACTTTAACCCAGCATCTCTTATTAAACCATAACATAGCCTCAAGATTTCTTGAAAGCTCACTTCTTTTTCTGATACAATGCACTGTCAGCGACCATAAACTATCAGAA	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_17069:HG2_10X_allpass_2007:HG2_Ill_Krunchall_16789:HG4_PB_pbsv_12343:HG3_PB_pbsv_12040:HG2_Ill_tnscope_1386:HG4_PB_SVrefine2PBcRDovetail_6210:HG4_PB_SVrefine2Falcon1Dovetail_7530:HG4_Ill_SVrefine2DISCOVARDovetail_8746:HG4_Ill_GATKHCSBGrefine_8536:HG4_10X_allpass_2348:HG3_PB_SVrefine2PBcRDovetail_5773:HG3_PB_SVrefine2Falcon1Dovetail_7499:HG3_Ill_MetaSV_876:HG3_Ill_GATKHCSBGrefine_8190:HG3_10X_allpass_2441:HG2_PB_pbsv_12362:HG2_PB_SVrefine2Falcon1plusDovetail_1926:HG2_Ill_SpiralSDKrefine_2774:HG2_10X_SVrefine210Xhap12_8629;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8629:HG2_Ill_SpiralSDKrefine_2774:HG2_PB_SVrefine2Falcon1plusDovetail_1926:HG2_PB_pbsv_12362:HG3_10X_allpass_2441:HG3_Ill_GATKHCSBGrefine_8190:HG3_Ill_MetaSV_876:HG3_PB_SVrefine2Falcon1Dovetail_7499:HG3_PB_SVrefine2PBcRDovetail_5773:HG4_10X_allpass_2348:HG4_Ill_GATKHCSBGrefine_8536:HG4_Ill_SVrefine2DISCOVARDovetail_8746:HG4_PB_SVrefine2Falcon1Dovetail_7530:HG4_PB_SVrefine2PBcRDovetail_6210;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0215424;ClusterMaxSizeDiff=0.0215424;ClusterMaxEditDist=0.0663507;PBcalls=8;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1168;DistBack=-4857;DistForward=-1150;DistMin=-4857;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=11:58166982-58168167;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=624.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:43:11:0|1:38:0:0:11:0|1:65:0:0:28:0/1:53:17:0/1:78:33:.:.:.
chr11	60390024	HG3_PB_SVrefine2PBcRDovetail_5783	CAGCCCCCCGCCCGGCCAGTCGCCCCGTCCGGGAGGTGAGGGGCACCTCTGCCTGGCTGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGTGGGGGGCACCTCTGCCCGGCCACCCCTACTGGGAAGTGAGG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8902:HG2_PB_HySA_22432:HG3_PB_SVrefine2PBcRDovetail_5783:HG2_PB_SVrefine2PBcRplusDovetail_1841;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_8902:HG3_PB_SVrefine2PBcRDovetail_5783:HG2_PB_SVrefine2PBcRplusDovetail_1841;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00970874;ClusterMaxSizeDiff=0.00970874;ClusterMaxEditDist=0.0242718;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-204;DistBack=-78;DistForward=-50;DistMin=-78;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=11:60390025-60390254;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9951;PctRecOverlap=0.9563;SizeDiff=-1;StartDistance=-8;EndDistance=-9;GTMatch=0;TruScore=97;MatchId=625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:37:0|1:41:3:4:37:./.:0:0:8:0:./.:30:3:./.:.:.:.:.:.
chr11	60591408	HG2_PB_SVrefine2PB10Xhap12_8904	GCCCTTAAGAAGGTACTTTGTAATATTCAAAGTACCACTTTGTAATATTCAAAGTA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2147:HG2_PB_HySA_22434:HG3_PB_pbsv_12054:HG2_PB_pbsv_12375:HG4_PB_pbsv_12355:HG4_Ill_250bpfermikitraw_16321:HG3_Ill_250bpfermikitraw_16018:HG2_Ill_SpiralSDKrefine_2784:HG2_Ill_250bpfermikitraw_16485:HG2_Ill_150bpfermikitraw_15540:HG4_Ill_SVrefine2DISCOVARDovetail_8752:HG3_PB_SVrefine2PBcRDovetail_5785:HG2_PB_SVrefine2PBcRplusDovetail_1843:HG2_PB_SVrefine2PB10Xhap12_8904:HG2_PB_SVrefine2Falcon2Bionano_6018:HG2_PB_SVrefine2Falcon1plusDovetail_1934;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2147:HG4_Ill_SVrefine2DISCOVARDovetail_8752:HG3_PB_SVrefine2PBcRDovetail_5785:HG2_PB_SVrefine2PBcRplusDovetail_1843:HG2_PB_SVrefine2PB10Xhap12_8904:HG2_PB_SVrefine2Falcon2Bionano_6018:HG2_PB_SVrefine2Falcon1plusDovetail_1934;NumExactMatchSVs=7;ClusterMaxShiftDist=0.193548;ClusterMaxSizeDiff=0.193548;ClusterMaxEditDist=0.196721;PBcalls=9;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=8235;DistForward=-21;DistMin=-21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=35;REFWIDENED=11:60591407-60591499;PctSeqSimilarity=0.9399;PctSizeSimilarity=0.8333;PctRecOverlap=0.3134;SizeDiff=-11;StartDistance=-35;EndDistance=-46;GTMatch=0;TruScore=69;MatchId=626.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:51:1/1:4:29:2:20:0/0:16:1:14:1:0/1:24:13:./.:.:.:.:.:.
chr11	61107785	HG2_10X_allpass_2009	TCCCTGCCTTCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8639:HG3_PB_HySA_18603:HG3_PB_pbsv_12059:HG2_PB_HySA_22450:HG4_PB_pbsv_12359:HG4_PB_assemblyticsfalcon_4290:HG4_PB_SVrefine2Falcon1Dovetail_7541:HG4_Ill_manta_2931:HG4_Ill_GATKHCSBGrefine_8547:HG3_Ill_scalpel_11867:HG3_Ill_manta_2819:HG3_Ill_GATKHCSBGrefine_8203:HG3_10X_allpass_2446:HG2_PB_pbsv_12379:HG2_PB_assemblyticsfalcon_4386:HG2_PB_SVrefine2Falcon1plusDovetail_1938:HG2_Ill_manta_3452:HG2_Ill_SVrefine2DISCOVARplusDovetail_2151:HG2_Ill_GATKHCSBGrefine_8309:HG2_10X_allpass_2009:HG2_Ill_tnscope_1387:HG4_PB_SVrefine2PBcRDovetail_6222:HG4_Ill_SVrefine2DISCOVARDovetail_8755:HG3_PB_SVrefine2PBcRDovetail_5789:HG3_PB_SVrefine2Falcon1Dovetail_7510:HG3_Ill_SVrefine2DISCOVARDovetail_8988:HG2_PB_SVrefine2PBcRplusDovetail_1846:HG2_PB_SVrefine2PB10Xhap12_8906:HG2_PB_SVrefine2Falcon2Bionano_6021:HG2_PB_SVrefine2Falcon1plusDovetail_1937:HG2_Ill_SVrefine2DISCOVARplusDovetail_2150;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_2009:HG2_Ill_GATKHCSBGrefine_8309:HG2_Ill_SVrefine2DISCOVARplusDovetail_2151:HG2_Ill_manta_3452:HG2_PB_SVrefine2Falcon1plusDovetail_1938:HG2_PB_assemblyticsfalcon_4386:HG2_PB_pbsv_12379:HG3_10X_allpass_2446:HG3_Ill_GATKHCSBGrefine_8203:HG3_Ill_manta_2819:HG3_Ill_scalpel_11867:HG4_Ill_GATKHCSBGrefine_8547:HG4_Ill_manta_2931:HG4_PB_SVrefine2Falcon1Dovetail_7541:HG4_PB_assemblyticsfalcon_4290:HG4_PB_pbsv_12359;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0262391;ClusterMaxSizeDiff=0.0233236;ClusterMaxEditDist=0.163265;PBcalls=16;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=-432;DistForward=37076;DistMin=-432;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=364;REFWIDENED=11:61107437-61108139;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:./.:0:0:1:9:./.:0:4:0:6:1/1:0:53:./.:2:10:.:.:.
chr11	61441343	HG3_Ill_150bpfermikitraw_15563	GAGGTGGGTGGATGGATGGATGGATGGATGGATGGATGGATAGGTGAATGGATGGATGGATGGGTGGATGGATGGATGGATGGATGGATGGAT	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_16494:HG2_PB_SVrefine2PBcRplusDovetail_1848:HG2_PB_SVrefine2PB10Xhap12_8908:HG2_PB_SVrefine2Falcon1plusDovetail_1940:HG2_PB_assemblyticsfalcon_4391:HG2_PB_assemblyticsPBcR_4245:HG2_PB_pbsv_12381:HG2_PB_HySA_22455:HG3_PB_pbsv_12061:HG3_Ill_svaba_15552:HG3_Ill_scalpel_11871:HG3_Ill_GATKHC_19658:HG3_Ill_GATKHCSBGrefine_8206:HG3_Ill_150bpfermikitraw_15563:HG2_Ill_svaba_15392:HG2_Ill_scalpel_11680:HG2_Ill_SpiralSDKrefine_2792:HG2_Ill_Krunchall_16815:HG2_Ill_GATKHC_19807:HG2_Ill_GATKHCSBGrefine_8310;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16494:HG3_PB_pbsv_12061:HG3_Ill_svaba_15552:HG3_Ill_scalpel_11871:HG3_Ill_GATKHC_19658:HG3_Ill_GATKHCSBGrefine_8206:HG3_Ill_150bpfermikitraw_15563:HG2_Ill_svaba_15392:HG2_Ill_scalpel_11680:HG2_Ill_SpiralSDKrefine_2792:HG2_Ill_Krunchall_16815:HG2_Ill_GATKHC_19807:HG2_Ill_GATKHCSBGrefine_8310;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0631579;ClusterMaxSizeDiff=0.0631579;ClusterMaxEditDist=0.145833;PBcalls=8;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-92;DistBack=10957;DistForward=15606;DistMin=10957;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3473;REFWIDENED=11:61431575-61441416;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=628.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:35:0|1:22:3:5:32:./.:36:44:200:4:0/1:16:18:./.:.:.:.:.:.
chr11	61635282	HG2_PB_SVrefine2PBcRplusDovetail_1849	AAGGCCGGGAGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACAAAGTCAAGAGATTGAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8641:HG4_PB_assemblyticsfalcon_4298:HG3_PB_assemblyticsfalcon_4401:HG4_PB_SVrefine2Falcon1Dovetail_7543:HG3_PB_SVrefine2Falcon1Dovetail_7512:HG3_PB_pbsv_12062:HG2_PB_pbsv_12382:HG4_PB_pbsv_12361:HG2_PB_HySA_22458:HG3_Ill_250bpfermikitraw_16030:HG3_10X_allpass_2447:HG4_PB_SVrefine2PBcRDovetail_6224:HG3_PB_SVrefine2PBcRDovetail_5792:HG3_Ill_SVrefine2DISCOVARDovetail_8991:HG2_PB_SVrefine2PBcRplusDovetail_1849:HG2_PB_SVrefine2PB10Xhap12_8909:HG2_PB_SVrefine2Falcon2Bionano_6023:HG2_PB_SVrefine2Falcon1plusDovetail_1941:HG2_Ill_SVrefine2DISCOVARplusDovetail_2152;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8641:HG4_PB_SVrefine2PBcRDovetail_6224:HG3_PB_SVrefine2PBcRDovetail_5792:HG3_Ill_SVrefine2DISCOVARDovetail_8991:HG2_PB_SVrefine2PBcRplusDovetail_1849:HG2_PB_SVrefine2PB10Xhap12_8909:HG2_PB_SVrefine2Falcon2Bionano_6023:HG2_PB_SVrefine2Falcon1plusDovetail_1941:HG2_Ill_SVrefine2DISCOVARplusDovetail_2152;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0597015;ClusterMaxEditDist=0.17037;PBcalls=14;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-134;DistBack=8089;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=322;REFWIDENED=11:61635283-61635738;PctSeqSimilarity=0.95;PctSizeSimilarity=1;PctRecOverlap=0.2667;SizeDiff=0;StartDistance=-99;EndDistance=-99;GTMatch=0;TruScore=73;MatchId=629.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:4:19:1:30:0/0:14:0:18:0:0/0:53:0:./.:.:.:.:.:.
chr11	61890304	HG4_Ill_GATKHCSBGrefine_8550	CCCGGCCAGAGATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCG	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1786:HG3_PB_HySA_18615:HG2_PB_HySA_22465:HG4_Ill_Krunchall_17099:HG4_Ill_Krunchall_17098:HG3_Ill_Krunchall_16506:HG4_Ill_Spiral_988:HG2_Ill_Spiral_852:HG4_PB_pbsv_12363:HG2_PB_pbsv_12384:HG3_PB_pbsv_12066:HG4_PB_assemblyticsfalcon_4301:HG4_Ill_scalpel_11374:HG4_Ill_manta_2932:HG4_Ill_Krunchall_17097:HG4_Ill_GATKHC_19781:HG4_Ill_GATKHCSBGrefine_8550:HG4_Ill_250bpfermikitraw_16334:HG4_10X_allpass_2353:HG3_PB_assemblyticsfalcon_4404:HG3_Ill_scalpel_11875:HG3_Ill_manta_2820:HG3_Ill_Krunchall_16505:HG3_Ill_GATKHC_19662:HG3_Ill_GATKHCSBGrefine_8207:HG3_Ill_250bpfermikitraw_16032:HG3_10X_allpass_2448:HG2_Ill_scalpel_11685:HG2_Ill_manta_3454:HG2_Ill_Krunchall_16820:HG2_Ill_GATKHC_19813:HG2_Ill_GATKHCSBGrefine_8312:HG2_Ill_250bpfermikitraw_16500:HG2_10X_allpass_2010:HG2_10X_SVrefine210Xhap12_8643;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8643:HG2_10X_allpass_2010:HG2_Ill_250bpfermikitraw_16500:HG2_Ill_GATKHCSBGrefine_8312:HG2_Ill_GATKHC_19813:HG2_Ill_Krunchall_16820:HG2_Ill_manta_3454:HG2_Ill_scalpel_11685:HG3_10X_allpass_2448:HG3_Ill_250bpfermikitraw_16032:HG3_Ill_GATKHCSBGrefine_8207:HG3_Ill_GATKHC_19662:HG3_Ill_Krunchall_16505:HG3_Ill_manta_2820:HG3_Ill_scalpel_11875:HG3_PB_assemblyticsfalcon_4404:HG4_10X_allpass_2353:HG4_Ill_250bpfermikitraw_16334:HG4_Ill_GATKHCSBGrefine_8550:HG4_Ill_GATKHC_19781:HG4_Ill_Krunchall_17097:HG4_Ill_manta_2932:HG4_Ill_scalpel_11374:HG4_PB_assemblyticsfalcon_4301;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0327869;PBcalls=7;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-90;DistBack=23065;DistForward=-74;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=11:61890305-61890411;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=630.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:47:1/1:0:30:1:18:1/1:0:19:0:17:1/1:0:49:./.:.:.:.:.:.
chr11	61944787	HG3_PB_HySA_18617	AGTGCCTGGAACCAATCCCCTGAGTATAGAGAAGAATGATTGTATACTCTGTGGTAGGATTGCTGGATCATATGGTTGTTTTATTTTTAATTTTTTGAGGAAACTCCATACTGTTTTTCATGACCGTACTAATTTATATTTCCACCAATAGTGGGTAAAAGGTTTTCTTTTCTCCACATCCTCGATAATACTTGTAATAGCCATTCTAACAGGTATGACCTAATTGTGGTTTTGATTTGCACTTCTCTGATCAGTCTATTAAGGTCTATTAAGTCTTAGGTCTATTAAGGTCTTTTGCC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_8911:HG2_Ill_tnscope_1388:HG4_PB_pbsv_12365:HG4_PB_assemblyticsfalcon_4303:HG4_PB_SVrefine2Falcon1Dovetail_7546:HG4_Ill_manta_2933:HG4_Ill_SVrefine2DISCOVARDovetail_8758:HG4_Ill_GATKHCSBGrefine_8551:HG4_10X_allpass_2354:HG3_PB_pbsv_12068:HG3_PB_assemblyticsfalcon_4406:HG3_PB_SVrefine2Falcon1Dovetail_7515:HG3_PB_HySA_18617:HG3_Ill_manta_2821:HG3_Ill_SVrefine2DISCOVARDovetail_8995:HG3_Ill_MetaSV_887:HG3_Ill_GATKHCSBGrefine_8208:HG2_PB_SVrefine2Falcon1plusDovetail_1943:HG2_Ill_manta_3455:HG2_Ill_breakscan11_1787:HG2_Ill_SpiralSDKrefine_2794:HG2_Ill_SVrefine2DISCOVARplusDovetail_2155:HG2_Ill_GATKHCSBGrefine_8313:HG2_10X_allpass_2011:HG2_10X_SVrefine210Xhap12_8644:HG2_PB_PB10Xdip_6051:HG2_PB_assemblyticsfalcon_4400:HG4_PB_SVrefine2PBcRDovetail_6226:HG4_Ill_Krunchall_17100:HG3_Ill_Krunchall_16507:HG2_Ill_Krunchall_16821:HG2_PB_pbsv_12386:HG2_PB_PB10Xdip_6050;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8644:HG2_10X_allpass_2011:HG2_Ill_GATKHCSBGrefine_8313:HG2_Ill_SVrefine2DISCOVARplusDovetail_2155:HG2_Ill_SpiralSDKrefine_2794:HG2_Ill_breakscan11_1787:HG2_Ill_manta_3455:HG2_PB_SVrefine2Falcon1plusDovetail_1943:HG3_Ill_GATKHCSBGrefine_8208:HG3_Ill_MetaSV_887:HG3_Ill_SVrefine2DISCOVARDovetail_8995:HG3_Ill_manta_2821:HG3_PB_HySA_18617:HG3_PB_SVrefine2Falcon1Dovetail_7515:HG3_PB_assemblyticsfalcon_4406:HG3_PB_pbsv_12068:HG4_10X_allpass_2354:HG4_Ill_GATKHCSBGrefine_8551:HG4_Ill_SVrefine2DISCOVARDovetail_8758:HG4_Ill_manta_2933:HG4_PB_SVrefine2Falcon1Dovetail_7546:HG4_PB_assemblyticsfalcon_4303:HG4_PB_pbsv_12365;NumExactMatchSVs=23;ClusterMaxShiftDist=0.243333;ClusterMaxSizeDiff=0.243333;ClusterMaxEditDist=0.243333;PBcalls=14;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-298;DistBack=-24;DistForward=468;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=11:61944788-61945085;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=631.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:35:0:0:26:0|1:57:0:0:30:0/1:52:15:./.:.:.:.:.:.
chr11	62880505	HG2_Ill_scalpel_11693	AAAATATATATATATATATATACATATATATATATACATATATATACACATATATATACATATATATATACATATATATACACATATATATATACATATATATATACACATATATATATACATATATATATACACATATATATACATATATATATACACATATATATATACATATATATACACATATATAT	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1389:HG4_PB_assemblyticsfalcon_4316:HG3_PB_assemblyticsfalcon_4418:HG4_PB_pbsv_12372:HG2_PB_assemblyticsPBcR_4270:HG2_PB_assemblyticsfalcon_4413:HG2_PB_pbsv_12394:HG4_Ill_GATKHCSBGrefine_8557:HG3_PB_pbsv_12077:HG2_Ill_GATKHCSBGrefine_8319:HG4_Ill_GATKHCSBGrefine_8556:HG3_Ill_GATKHCSBGrefine_8215:HG3_Ill_SVrefine2DISCOVARDovetail_9004:HG4_PB_SVrefine2Falcon1Dovetail_7552:HG3_PB_SVrefine2Falcon1Dovetail_7519:HG4_Ill_SVrefine2DISCOVARDovetail_8766:HG3_PB_HySA_18630:HG2_PB_SVrefine2PBcRplusDovetail_1857:HG2_PB_SVrefine2PB10Xhap12_8917:HG4_PB_SVrefine2PBcRDovetail_6231:HG2_PB_SVrefine2Falcon1plusDovetail_1949:HG4_Ill_scalpel_11382:HG2_Ill_scalpel_11693:HG2_Ill_manta_3458:HG2_10X_SVrefine210Xhap12_8646;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8646:HG2_Ill_manta_3458:HG2_Ill_scalpel_11693:HG4_Ill_scalpel_11382;NumExactMatchSVs=4;ClusterMaxShiftDist=0.263736;ClusterMaxSizeDiff=0.263736;ClusterMaxEditDist=0.263736;PBcalls=14;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-190;DistBack=20502;DistForward=64600;DistMin=20502;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=11:62880508-62880714;PctSeqSimilarity=0.9821;PctSizeSimilarity=1;PctRecOverlap=0.9686;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=98;MatchId=632.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:0:22:1:19:./.:0:7:1:13:./.:0:5:./.:.:.:.:.:.
chr11	63086792	HG3_Ill_250bpfermikitraw_16042	GGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_12374:HG4_Ill_GATKHC_19795:HG4_Ill_GATKHCSBGrefine_8559:HG2_Ill_GATKHC_19831:HG4_Ill_svaba_15462:HG4_Ill_scalpel_11384:HG4_Ill_manta_2938:HG4_Ill_Krunchall_17111:HG4_Ill_250bpfermikitraw_16344:HG4_Ill_150bpfermikitraw_15707:HG3_Ill_svaba_15569:HG3_Ill_scalpel_11884:HG3_Ill_Krunchall_16518:HG3_Ill_250bpfermikitraw_16042:HG3_Ill_150bpfermikitraw_15575:HG2_Ill_svaba_15412:HG2_Ill_scalpel_11695:HG2_Ill_manta_3459:HG2_Ill_250bpfermikitraw_16509:HG2_Ill_150bpfermikitraw_15568;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15568:HG2_Ill_250bpfermikitraw_16509:HG2_Ill_manta_3459:HG2_Ill_scalpel_11695:HG2_Ill_svaba_15412:HG3_Ill_150bpfermikitraw_15575:HG3_Ill_250bpfermikitraw_16042:HG3_Ill_Krunchall_16518:HG3_Ill_scalpel_11884:HG3_Ill_svaba_15569:HG4_Ill_150bpfermikitraw_15707:HG4_Ill_250bpfermikitraw_16344:HG4_Ill_Krunchall_17111:HG4_Ill_manta_2938:HG4_Ill_scalpel_11384:HG4_Ill_svaba_15462;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.150943;PBcalls=1;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=51401;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:63086920-63095746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=633.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:35:./.:18:7:3:24:./.:1:14:0:8:1/1:0:35:./.:.:.:.:.:.
chr11	64268439	HG3_Ill_GATKHC_19692	GCCGGCTGGGCCTGCTTGTGGGTAAGGGAGAGAGGACAGAAGCCTGTGCTGCTCAGGAGCC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_12380:HG4_PB_assemblyticsfalcon_4324:HG2_PB_assemblyticsfalcon_4424:HG2_PB_assemblyticsPBcR_4280:HG3_PB_assemblyticsfalcon_4425:HG4_Ill_Spiral_989:HG3_PB_HySA_18642:HG2_PB_HySA_22503:HG2_Ill_Spiral_853:HG4_PB_SVrefine2Falcon1Dovetail_7556:HG4_Ill_svaba_15473:HG4_Ill_manta_2941:HG4_Ill_SVrefine2DISCOVARDovetail_8776:HG4_Ill_Krunchall_17121:HG4_Ill_GATKHC_19808:HG4_Ill_GATKHCSBGrefine_8563:HG4_Ill_Cortex_599:HG4_Ill_250bpfermikitraw_16356:HG4_Ill_150bpfermikitraw_15718:HG4_CG_vcfBeta_7878:HG4_10X_allpass_2357:HG3_PB_SVrefine2PBcRDovetail_5795:HG3_PB_SVrefine2Falcon1Dovetail_7523:HG3_Ill_svaba_15579:HG3_Ill_scalpel_11890:HG3_Ill_manta_2823:HG3_Ill_SVrefine2DISCOVARDovetail_9016:HG3_Ill_Krunchall_16525:HG3_Ill_GATKHC_19692:HG3_Ill_GATKHCSBGrefine_8220:HG3_Ill_Cortex_637:HG3_Ill_250bpfermikitraw_16052:HG3_Ill_150bpfermikitraw_15583:HG3_CG_vcfBeta_6696:HG3_10X_allpass_2451:HG2_PB_SVrefine2PBcRplusDovetail_1861:HG2_PB_SVrefine2PB10Xhap12_8922:HG2_PB_SVrefine2Falcon1plusDovetail_1952:HG2_Ill_svaba_15423:HG2_Ill_scalpel_11702:HG2_Ill_manta_3461:HG2_Ill_SpiralSDKrefine_2811:HG2_Ill_SVrefine2DISCOVARplusDovetail_2174:HG2_Ill_Krunchall_16840:HG2_Ill_GATKHC_19841:HG2_Ill_GATKHCSBGrefine_8322:HG2_Ill_Cortex_1452:HG2_Ill_250bpfermikitraw_16516:HG2_Ill_150bpfermikitraw_15575:HG2_CG_vcfBeta_7025:HG2_10X_SVrefine210Xhap12_8656:HG2_Ill_breakscan11_1789:HG3_Ill_Spiral_12876:HG3_PB_pbsv_12084:HG2_PB_pbsv_12400;NumClusterSVs=55;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8656:HG2_CG_vcfBeta_7025:HG2_Ill_150bpfermikitraw_15575:HG2_Ill_250bpfermikitraw_16516:HG2_Ill_Cortex_1452:HG2_Ill_GATKHCSBGrefine_8322:HG2_Ill_GATKHC_19841:HG2_Ill_Krunchall_16840:HG2_Ill_SVrefine2DISCOVARplusDovetail_2174:HG2_Ill_SpiralSDKrefine_2811:HG2_Ill_manta_3461:HG2_Ill_scalpel_11702:HG2_Ill_svaba_15423:HG2_PB_SVrefine2Falcon1plusDovetail_1952:HG2_PB_SVrefine2PB10Xhap12_8922:HG2_PB_SVrefine2PBcRplusDovetail_1861:HG3_10X_allpass_2451:HG3_CG_vcfBeta_6696:HG3_Ill_150bpfermikitraw_15583:HG3_Ill_250bpfermikitraw_16052:HG3_Ill_Cortex_637:HG3_Ill_GATKHCSBGrefine_8220:HG3_Ill_GATKHC_19692:HG3_Ill_Krunchall_16525:HG3_Ill_SVrefine2DISCOVARDovetail_9016:HG3_Ill_manta_2823:HG3_Ill_scalpel_11890:HG3_Ill_svaba_15579:HG3_PB_SVrefine2Falcon1Dovetail_7523:HG3_PB_SVrefine2PBcRDovetail_5795:HG4_10X_allpass_2357:HG4_CG_vcfBeta_7878:HG4_Ill_150bpfermikitraw_15718:HG4_Ill_250bpfermikitraw_16356:HG4_Ill_Cortex_599:HG4_Ill_GATKHCSBGrefine_8563:HG4_Ill_GATKHC_19808:HG4_Ill_Krunchall_17121:HG4_Ill_SVrefine2DISCOVARDovetail_8776:HG4_Ill_manta_2941:HG4_Ill_svaba_15473:HG4_PB_SVrefine2Falcon1Dovetail_7556;NumExactMatchSVs=42;ClusterMaxShiftDist=0.0495868;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.115702;PBcalls=15;Illcalls=34;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=30;TenXexactcalls=3;CGexactcalls=3;HG2count=22;HG3count=18;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-60;DistBack=16876;DistForward=13214;DistMin=13214;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=11:64268440-64268501;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:1/1:0:12:1:14:1/1:0:17:0:12:1/1:0:56:./.:.:.:.:.:.
chr11	64623328	HG2_Ill_150bpfermikitraw_15582	TTCAACCCTCACCACGCATCACACACCCTCCGCTCAACCCTCACCACGCATCACACACCCTCCGCTCAACCCTCACCACGCATCACACACCCTCCGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8658:HG2_PB_HySA_22518:HG4_PB_assemblyticsfalcon_4330:HG4_PB_HySA_17997:HG3_PB_HySA_18654:HG2_PB_pbsv_12406:HG3_PB_pbsv_12090:HG4_PB_pbsv_12389:HG4_PB_SVrefine2Falcon1Dovetail_7561:HG4_Ill_svaba_15482:HG4_Ill_GATKHCSBGrefine_8570:HG4_Ill_250bpfermikitraw_16363:HG4_Ill_150bpfermikitraw_15726:HG3_Ill_svaba_15585:HG3_Ill_GATKHCSBGrefine_8224:HG3_Ill_250bpfermikitraw_16056:HG3_Ill_150bpfermikitraw_15591:HG2_Ill_svaba_15430:HG2_Ill_SpiralSDKrefine_2815:HG2_Ill_GATKHCSBGrefine_8326:HG2_Ill_250bpfermikitraw_16520:HG2_Ill_150bpfermikitraw_15582:HG4_PB_SVrefine2PBcRDovetail_6242:HG4_Ill_SVrefine2DISCOVARDovetail_8781:HG3_PB_SVrefine2PBcRDovetail_5799:HG3_PB_SVrefine2Falcon1Dovetail_7529:HG3_Ill_SVrefine2DISCOVARDovetail_9018:HG2_PB_SVrefine2PBcRplusDovetail_1866:HG2_PB_SVrefine2PB10Xhap12_8929:HG2_PB_SVrefine2Falcon2Bionano_6030:HG2_PB_SVrefine2Falcon1plusDovetail_1958:HG2_Ill_SVrefine2DISCOVARplusDovetail_2178;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15582:HG2_Ill_250bpfermikitraw_16520:HG2_Ill_GATKHCSBGrefine_8326:HG2_Ill_SpiralSDKrefine_2815:HG2_Ill_svaba_15430:HG3_Ill_150bpfermikitraw_15591:HG3_Ill_250bpfermikitraw_16056:HG3_Ill_GATKHCSBGrefine_8224:HG3_Ill_svaba_15585:HG4_Ill_150bpfermikitraw_15726:HG4_Ill_250bpfermikitraw_16363:HG4_Ill_GATKHCSBGrefine_8570:HG4_Ill_svaba_15482:HG4_PB_SVrefine2Falcon1Dovetail_7561;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.0408163;PBcalls=15;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-96;DistBack=96840;DistForward=-18;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=120;REFWIDENED=11:64623312-64623527;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:2:20:0:20:1/1:0:6:0:7:1/1:0:28:./.:.:.:.:.:.
chr11	65364269	HG2_Ill_scalpel_11714	AGCCCTAGGGTATGGTGTGGGAGTGCCAGAGCCCCCATGGCAGTGTGAAGAGAATGGACAGAGGCCGAGGGAGGGACCCT	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_16526:HG4_PB_HySA_18003:HG4_PB_pbsv_12396:HG4_Ill_GATKHC_19825:HG4_Ill_GATKHCSBGrefine_8574:HG2_Ill_GATKHC_19862:HG2_Ill_GATKHCSBGrefine_8330:HG2_Ill_manta_3463:HG4_Ill_Spiral_990:HG2_Ill_Spiral_854:HG2_PB_assemblyticsfalcon_4440:HG2_PB_pbsv_12410:HG4_Ill_svaba_15492:HG4_Ill_scalpel_11402:HG4_Ill_Krunchall_17134:HG4_Ill_250bpfermikitraw_16370:HG2_Ill_svaba_15436:HG2_Ill_scalpel_11714:HG2_Ill_SpiralSDKrefine_2818:HG2_Ill_Krunchall_16849;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16526:HG4_Ill_svaba_15492:HG4_Ill_scalpel_11402:HG4_Ill_Krunchall_17134:HG4_Ill_250bpfermikitraw_16370:HG2_Ill_svaba_15436:HG2_Ill_scalpel_11714:HG2_Ill_SpiralSDKrefine_2818:HG2_Ill_Krunchall_16849;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0636943;ClusterMaxSizeDiff=0.0636943;ClusterMaxEditDist=0.0645161;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-79;DistBack=56094;DistForward=79427;DistMin=56094;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=78;REFWIDENED=11:65364245-65364401;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9873;PctRecOverlap=0.55;SizeDiff=1;StartDistance=-36;EndDistance=-35;GTMatch=0;TruScore=84;MatchId=637.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:16:0|1:27:1:2:15:0|1:11:0:0:11:0/1:22:17:./.:.:.:.:.:.
chr11	68182942	HG2_PB_SVrefine2PBcRplusDovetail_1886	GGTGGCTCATGACTGTTATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAATATGGTGAAACTCCATCTCTACTAAAAATACAAAATTAGCCGGGCATGGTGGGGCATGCCTATAATCCCAGCTACTTGGGAGGCTGAGAGAGGAGAATCGCTTGAACTTGGGAGGTGGAAGTTTCAAGTGAGCTCATTTTGTGCCACTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCATCTCGAATGAATGAATGAATGAATGAATGAATGGCAGGGCGTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8673:HG4_PB_SVrefine2PBcRDovetail_6257:HG4_Ill_Krunchall_17150:HG2_Ill_Krunchall_16861:HG4_PB_pbsv_12422:HG3_PB_HySA_18699:HG4_PB_HySA_18041:HG2_PB_HySA_22562:HG4_Ill_MetaSV_847:HG3_Ill_MetaSV_899:HG2_Ill_tnscope_1394:HG2_Ill_MetaSV_815:HG4_Ill_manta_2946:HG4_10X_allpass_2361:HG3_PB_pbsv_12121:HG3_Ill_scalpel_11915:HG3_Ill_GATKHCSBGrefine_8247:HG3_10X_allpass_2458:HG2_PB_pbsv_12434:HG2_Ill_scalpel_11727:HG2_Ill_manta_3465:HG2_Ill_SVrefine2DISCOVARplusDovetail_2195:HG2_Ill_GATKHCSBGrefine_8351:HG4_PB_SVrefine2Falcon1Dovetail_7581:HG4_Ill_SVrefine2DISCOVARDovetail_8796:HG3_PB_SVrefine2PBcRDovetail_5820:HG3_PB_SVrefine2Falcon1Dovetail_7550:HG3_Ill_SVrefine2DISCOVARDovetail_9039:HG2_PB_SVrefine2PBcRplusDovetail_1886:HG2_PB_SVrefine2PB10Xhap12_8949:HG2_PB_SVrefine2Falcon2Bionano_6049:HG2_PB_SVrefine2Falcon1plusDovetail_1979:HG2_Ill_SVrefine2DISCOVARplusDovetail_2194;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8673:HG4_PB_SVrefine2Falcon1Dovetail_7581:HG4_Ill_SVrefine2DISCOVARDovetail_8796:HG3_PB_SVrefine2PBcRDovetail_5820:HG3_PB_SVrefine2Falcon1Dovetail_7550:HG3_Ill_SVrefine2DISCOVARDovetail_9039:HG2_PB_SVrefine2PBcRplusDovetail_1886:HG2_PB_SVrefine2PB10Xhap12_8949:HG2_PB_SVrefine2Falcon2Bionano_6049:HG2_PB_SVrefine2Falcon1plusDovetail_1979:HG2_Ill_SVrefine2DISCOVARplusDovetail_2194;NumExactMatchSVs=11;ClusterMaxShiftDist=0.016129;ClusterMaxSizeDiff=0.016129;ClusterMaxEditDist=0.187097;PBcalls=14;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=6380;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=269;REFWIDENED=11:68182943-68183522;PctSeqSimilarity=0.901;PctSizeSimilarity=0.9968;PctRecOverlap=0.516;SizeDiff=1;StartDistance=-151;EndDistance=-150;GTMatch=0;TruScore=80;MatchId=638.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:./.:0:1:0:0:./.:0:0:0:0:./.:28:3:./.:16:2:.:.:.
chr11	68797622	HG2_Ill_GATKHCSBGrefine_8354	TTCCCCCTTCCCTCCCTTTCTTCCTCCCTCCCTCCTTTCTTTTTTTCTCTCTCTCTTTCTTCCCCTCCCTCCCTCCCTCTCGTCCTTCCTTCCTTCCTTCC	T	20	PASS	ClusterIDs=HG4_PB_HySA_18055:HG2_PB_assemblyticsfalcon_4482:HG4_PB_pbsv_12429:HG2_PB_pbsv_12442:HG4_Ill_svaba_15526:HG4_Ill_scalpel_11422:HG4_Ill_manta_2947:HG4_Ill_Krunchall_17158:HG4_Ill_GATKHC_19858:HG4_Ill_GATKHCSBGrefine_8596:HG4_Ill_250bpfermikitraw_16386:HG4_Ill_150bpfermikitraw_15754:HG4_10X_allpass_2362:HG2_PB_SVrefine2PB10Xhap12_8958:HG2_PB_SVrefine2Falcon1plusDovetail_1986:HG2_Ill_svaba_15469:HG2_Ill_SpiralSDKrefine_2832:HG2_Ill_SVrefine2DISCOVARplusDovetail_2202:HG2_Ill_GATKHC_19890:HG2_Ill_GATKHCSBGrefine_8354:HG2_Ill_150bpfermikitraw_15607:HG2_10X_allpass_2015:HG2_10X_SVrefine210Xhap12_8680;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8680:HG2_10X_allpass_2015:HG2_Ill_150bpfermikitraw_15607:HG2_Ill_GATKHCSBGrefine_8354:HG2_Ill_GATKHC_19890:HG2_Ill_SVrefine2DISCOVARplusDovetail_2202:HG2_Ill_SpiralSDKrefine_2832:HG2_Ill_svaba_15469:HG2_PB_SVrefine2Falcon1plusDovetail_1986:HG2_PB_SVrefine2PB10Xhap12_8958:HG4_10X_allpass_2362:HG4_Ill_150bpfermikitraw_15754:HG4_Ill_250bpfermikitraw_16386:HG4_Ill_GATKHCSBGrefine_8596:HG4_Ill_GATKHC_19858:HG4_Ill_Krunchall_17158:HG4_Ill_manta_2947:HG4_Ill_scalpel_11422:HG4_Ill_svaba_15526;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0682927;ClusterMaxSizeDiff=0.0682927;ClusterMaxEditDist=0.0682927;PBcalls=6;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-100;DistBack=13513;DistForward=25273;DistMin=13513;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:68797623-68797723;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:./.:17:8:3:11:0|1:37:1:0:8:0/1:20:12:./.:.:.:.:.:.
chr11	69400840	HG2_PB_SVrefine2PBcRplusDovetail_1903	GCTCAATGTCGTTAGATGAGAAGTCTGACATGGAAGAGGCTTGGCCACATTCTCTGTTAAGAGAAGCAGGATTCCTGCCCCTAAGCTCCCCAGTAGCCTGCATTTGTTATTGCTGAACATCGGGCCCATGTCGCCGTGTTCAGCCTGCACGTTGACATCCGTTGCAACAACTCTTCCTCCAAGTATCACACACTCAGCACCCACTCCACTGGGATTCGCTGGGATGTGAACCATGACAATGAACCAATGACTGTACTTCGCCTAGGCTTTTCCAAATGGGGCCCAGATGGTGAGTTATGAAGGACATAGTGTGGCCCTCAGTTCTCCCCCCTGGCTGCTGTCACAATGGGCTCTTAAAACCGTGAATCTGGGACAGGAGCGGTGGCTCACGCCTGTAATCACAACACTTTGGGAGGCCAAGGCAGGCGGATCATGAGGTCAAGAGATAGAGATCATCCTGGCCAACATGGTGAAACCCTGTCTCTACTCAAAATACAAAAATTAGCTGGGCGTGGTGGCGTGCGCCTGTAGTCCCAAGCTATGGGGGAGGCTGAGGCACGAGA	G	20	PASS	ClusterIDs=HG3_PB_HySA_18723:HG3_PB_pbsv_12146:HG3_Ill_Krunchall_16564:HG2_Ill_Krunchall_16876:HG4_PB_pbsv_12444:HG2_PB_assemblyticsfalcon_4499:HG4_PB_assemblyticsfalcon_4388:HG3_PB_assemblyticsfalcon_4496:HG2_PB_assemblyticsPBcR_4356:HG2_PB_HySA_22592:HG2_Ill_tnscope_1395:HG4_PB_SVrefine2PBcRDovetail_6272:HG4_PB_SVrefine2Falcon1Dovetail_7600:HG4_Ill_manta_2950:HG4_Ill_SVrefine2DISCOVARDovetail_8808:HG4_Ill_MetaSV_852:HG4_Ill_GATKHCSBGrefine_8605:HG4_10X_allpass_2363:HG3_PB_SVrefine2PBcRDovetail_5838:HG3_PB_SVrefine2Falcon1Dovetail_7568:HG3_Ill_manta_2832:HG3_Ill_SVrefine2DISCOVARDovetail_9047:HG3_Ill_MetaSV_903:HG3_Ill_GATKHCSBGrefine_8257:HG3_10X_allpass_2459:HG2_PB_pbsv_12457:HG2_PB_SVrefine2PBcRplusDovetail_1903:HG2_PB_SVrefine2PB10Xhap12_8969:HG2_PB_SVrefine2Falcon2Bionano_6067:HG2_PB_SVrefine2Falcon1plusDovetail_1996:HG2_Ill_manta_3470:HG2_Ill_SpiralSDKrefine_2836:HG2_Ill_SVrefine2DISCOVARplusDovetail_2210:HG2_Ill_MetaSV_818:HG2_Ill_GATKHCSBGrefine_8362:HG2_10X_allpass_2016:HG2_10X_SVrefine210Xhap12_8691;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8691:HG2_10X_allpass_2016:HG2_Ill_GATKHCSBGrefine_8362:HG2_Ill_MetaSV_818:HG2_Ill_SVrefine2DISCOVARplusDovetail_2210:HG2_Ill_SpiralSDKrefine_2836:HG2_Ill_manta_3470:HG2_PB_SVrefine2Falcon1plusDovetail_1996:HG2_PB_SVrefine2Falcon2Bionano_6067:HG2_PB_SVrefine2PB10Xhap12_8969:HG2_PB_SVrefine2PBcRplusDovetail_1903:HG2_PB_pbsv_12457:HG3_10X_allpass_2459:HG3_Ill_GATKHCSBGrefine_8257:HG3_Ill_MetaSV_903:HG3_Ill_SVrefine2DISCOVARDovetail_9047:HG3_Ill_manta_2832:HG3_PB_SVrefine2Falcon1Dovetail_7568:HG3_PB_SVrefine2PBcRDovetail_5838:HG4_10X_allpass_2363:HG4_Ill_GATKHCSBGrefine_8605:HG4_Ill_MetaSV_852:HG4_Ill_SVrefine2DISCOVARDovetail_8808:HG4_Ill_manta_2950:HG4_PB_SVrefine2Falcon1Dovetail_7600:HG4_PB_SVrefine2PBcRDovetail_6272;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0159716;ClusterMaxSizeDiff=0.0159716;ClusterMaxEditDist=0.0159716;PBcalls=17;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-562;DistBack=33074;DistForward=-560;DistMin=-560;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=11:69400841-69401405;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=640.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:3:18:0:16:1/1:0:18:0:29:1/1:0:37:0/1:3:18:.:.:.
chr11	69967935	HG3_Ill_GATKHCSBGrefine_8261	ACCTCTCTGTCTGTCTCTCTATCTCTGTCTCTCCATCTGCCTCTGTCTCTGTCTCTCCATCTCCCCCG	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_4503:HG4_PB_pbsv_12448:HG2_PB_pbsv_12462:HG2_PB_HySA_22602:HG3_PB_pbsv_12152:HG2_PB_assemblyticsPBcR_4363:HG4_Ill_GATKHC_19885:HG3_PB_assemblyticsfalcon_4505:HG3_Ill_GATKHC_19774:HG3_Ill_GATKHCSBGrefine_8261:HG2_Ill_GATKHC_19915;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHC_19915:HG3_Ill_GATKHCSBGrefine_8261:HG3_Ill_GATKHC_19774:HG3_PB_assemblyticsfalcon_4505:HG4_Ill_GATKHC_19885;NumExactMatchSVs=5;ClusterMaxShiftDist=0.139535;ClusterMaxSizeDiff=0.139535;ClusterMaxEditDist=0.174603;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-67;DistBack=9839;DistForward=-53;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1488;REFWIDENED=11:69967334-69968888;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:39:1/1:2:20:0:9:./.:12:8:9:17:./.:0:0:./.:.:.:.:.:.
chr11	71861597	HG2_Ill_SpiralSDKrefine_2856	TTACTGAATTGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCTCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_822:HG4_PB_assemblyticsfalcon_4421:HG3_PB_assemblyticsfalcon_4528:HG2_PB_assemblyticsPBcR_4385:HG4_Ill_Krunchall_17195:HG3_Ill_Krunchall_16588:HG2_Ill_Krunchall_16899:HG2_PB_pbsv_12476:HG3_PB_pbsv_12163:HG2_PB_HySA_22632:HG3_PB_HySA_18770:HG4_PB_pbsv_12461:HG4_PB_SVrefine2PBcRDovetail_6281:HG4_PB_SVrefine2Falcon1Dovetail_7610:HG4_Ill_svaba_15564:HG4_Ill_scalpel_11447:HG4_Ill_manta_2954:HG4_Ill_SVrefine2DISCOVARDovetail_8823:HG4_Ill_GATKHCSBGrefine_8615:HG4_10X_allpass_2365:HG3_PB_SVrefine2PBcRDovetail_5846:HG3_PB_SVrefine2Falcon1Dovetail_7578:HG3_Ill_svaba_15657:HG3_Ill_scalpel_11944:HG3_Ill_manta_2835:HG3_Ill_SVrefine2DISCOVARDovetail_9060:HG3_Ill_GATKHCSBGrefine_8265:HG3_10X_allpass_2461:HG2_PB_assemblyticsfalcon_4525:HG2_PB_SVrefine2PBcRplusDovetail_1913:HG2_PB_SVrefine2PB10Xhap12_8978:HG2_PB_SVrefine2Falcon2Bionano_6078:HG2_PB_SVrefine2Falcon1plusDovetail_2006:HG2_Ill_svaba_15497:HG2_Ill_scalpel_11754:HG2_Ill_manta_3474:HG2_Ill_SpiralSDKrefine_2856:HG2_Ill_SVrefine2DISCOVARplusDovetail_2223:HG2_Ill_GATKHCSBGrefine_8369:HG2_10X_SVrefine210Xhap12_8709:HG2_Ill_breakscan11_1794:HG3_Ill_MetaSV_906:HG2_Ill_tnscope_1396;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8709:HG2_Ill_GATKHCSBGrefine_8369:HG2_Ill_SVrefine2DISCOVARplusDovetail_2223:HG2_Ill_SpiralSDKrefine_2856:HG2_Ill_manta_3474:HG2_Ill_scalpel_11754:HG2_Ill_svaba_15497:HG2_PB_SVrefine2Falcon1plusDovetail_2006:HG2_PB_SVrefine2Falcon2Bionano_6078:HG2_PB_SVrefine2PB10Xhap12_8978:HG2_PB_SVrefine2PBcRplusDovetail_1913:HG2_PB_assemblyticsfalcon_4525:HG3_10X_allpass_2461:HG3_Ill_GATKHCSBGrefine_8265:HG3_Ill_SVrefine2DISCOVARDovetail_9060:HG3_Ill_manta_2835:HG3_Ill_scalpel_11944:HG3_Ill_svaba_15657:HG3_PB_SVrefine2Falcon1Dovetail_7578:HG3_PB_SVrefine2PBcRDovetail_5846:HG4_10X_allpass_2365:HG4_Ill_GATKHCSBGrefine_8615:HG4_Ill_SVrefine2DISCOVARDovetail_8823:HG4_Ill_manta_2954:HG4_Ill_scalpel_11447:HG4_Ill_svaba_15564:HG4_PB_SVrefine2Falcon1Dovetail_7610:HG4_PB_SVrefine2PBcRDovetail_6281;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0741935;ClusterMaxSizeDiff=0.0741935;ClusterMaxEditDist=0.0741935;PBcalls=17;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=-458;DistForward=50289;DistMin=-458;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=11:71861598-71861924;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=643.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:./.:0:5:0:2:./.:0:0:0:0:1/1:0:56:./.:2:13:.:.:.
chr11	72273985	HG4_Ill_Krunchall_17198	TTTGTTCCCCAGGCCTCAGGTGCAGAGGGCTGAGCTAATCCTACTCCTGAGTTCACAGCGTG	T	20	PASS	ClusterIDs=HG2_PB_pbsv_12479:HG4_PB_assemblyticsfalcon_4425:HG4_Ill_svaba_15568:HG4_Ill_scalpel_11451:HG4_Ill_Krunchall_17198:HG4_Ill_GATKHC_19920:HG4_Ill_GATKHCSBGrefine_8619:HG4_Ill_Cortex_613:HG4_Ill_250bpfermikitraw_16434:HG4_Ill_150bpfermikitraw_15801:HG4_10X_allpass_2366:HG2_Ill_svaba_15501:HG2_Ill_breakscan11_1795:HG2_Ill_SpiralSDKrefine_2859:HG2_Ill_Krunchall_16903:HG2_Ill_GATKHC_19938:HG2_Ill_GATKHCSBGrefine_8371:HG2_Ill_Cortex_1468:HG2_Ill_250bpfermikitraw_16578:HG2_Ill_150bpfermikitraw_15635:HG2_10X_allpass_2017:HG4_PB_HySA_18110:HG2_PB_HySA_22638:HG4_PB_pbsv_12463;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_2017:HG2_Ill_150bpfermikitraw_15635:HG2_Ill_250bpfermikitraw_16578:HG2_Ill_Cortex_1468:HG2_Ill_GATKHCSBGrefine_8371:HG2_Ill_GATKHC_19938:HG2_Ill_Krunchall_16903:HG2_Ill_SpiralSDKrefine_2859:HG2_Ill_breakscan11_1795:HG2_Ill_svaba_15501:HG4_10X_allpass_2366:HG4_Ill_150bpfermikitraw_15801:HG4_Ill_250bpfermikitraw_16434:HG4_Ill_Cortex_613:HG4_Ill_GATKHCSBGrefine_8619:HG4_Ill_GATKHC_19920:HG4_Ill_Krunchall_17198:HG4_Ill_scalpel_11451:HG4_Ill_svaba_15568:HG4_PB_assemblyticsfalcon_4425;NumExactMatchSVs=20;ClusterMaxShiftDist=0.214286;ClusterMaxSizeDiff=0.214286;ClusterMaxEditDist=0.214286;PBcalls=5;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-61;DistBack=-37;DistForward=-24;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=11:72273984-72274047;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=644.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:26:0|1:33:3:1:21:1|0:0:21:37:1:0/1:30:27:./.:.:.:.:.:.
chr11	74532404	HG2_PB_SVrefine2Falcon2Bionano_6088	TAAAAGAATACAAGTGCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_1924:HG4_PB_assemblyticsfalcon_4438:HG2_PB_SVrefine2PB10Xhap12_8992:HG3_PB_assemblyticsfalcon_4547:HG3_Ill_Krunchall_16611:HG2_PB_pbsv_12487:HG2_Ill_Krunchall_16922:HG2_PB_assemblyticsPBcR_4404:HG3_PB_HySA_18792:HG3_Ill_Spiral_12954:HG3_PB_pbsv_12179:HG3_Ill_MetaSV_909:HG2_Ill_tnscope_1398:HG2_Ill_MetaSV_824:HG4_PB_SVrefine2Falcon1Dovetail_7620:HG3_PB_SVrefine2PBcRDovetail_5856:HG3_PB_SVrefine2Falcon1Dovetail_7589:HG3_Ill_scalpel_11956:HG3_Ill_SVrefine2DISCOVARDovetail_9076:HG3_Ill_GATKHCSBGrefine_8275:HG3_10X_allpass_2463:HG2_PB_SVrefine2PB10Xhap12_8991:HG2_PB_SVrefine2Falcon2Bionano_6088:HG2_Ill_manta_3478:HG2_Ill_GATKHCSBGrefine_8380:HG2_10X_allpass_2019:HG2_10X_SVrefine210Xhap12_8721:HG2_Ill_breakscan11_1797:HG2_PB_HySA_22655;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8721:HG2_10X_allpass_2019:HG2_Ill_GATKHCSBGrefine_8380:HG2_Ill_manta_3478:HG2_PB_SVrefine2Falcon2Bionano_6088:HG2_PB_SVrefine2PB10Xhap12_8991:HG3_10X_allpass_2463:HG3_Ill_GATKHCSBGrefine_8275:HG3_Ill_SVrefine2DISCOVARDovetail_9076:HG3_Ill_scalpel_11956:HG3_PB_SVrefine2Falcon1Dovetail_7589:HG3_PB_SVrefine2PBcRDovetail_5856:HG4_PB_SVrefine2Falcon1Dovetail_7620;NumExactMatchSVs=13;ClusterMaxShiftDist=0.313514;ClusterMaxSizeDiff=0.313514;ClusterMaxEditDist=0.313514;PBcalls=14;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=15838;DistForward=-303;DistMin=-303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=11:74532405-74532742;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=645.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:42:0|1:48:0:0:44:0|1:57:0:0:37:0/1:25:17:0/1:34:13:.:.:.
chr11	80242902	HG3_Ill_250bpfermikitraw_16180	TCTGGTGGGTTCATGGTCTCGCTGGCTTCAGGAGTGAAGCTGCAGACCTTCACGGTGAGTGTTACAGCTCTTAAAGGCGGTGCAACTGGAGTTGTTCTTTCCTCTCGTCAGGAGTTGTTCGTCCCTC	T	20	PASS	ClusterIDs=HG3_PB_HySA_18833:HG3_Ill_Krunchall_16643:HG2_Ill_Krunchall_16962:HG2_PB_assemblyticsPBcR_4451:HG2_PB_HySA_22704:HG3_PB_pbsv_12203:HG2_PB_pbsv_12513:HG4_PB_SVrefine2Falcon1Dovetail_7638:HG3_PB_SVrefine2PBcRDovetail_5870:HG3_Ill_scalpel_11977:HG3_Ill_manta_2842:HG3_Ill_SVrefine2DISCOVARDovetail_9102:HG3_Ill_GATKHC_19855:HG3_Ill_GATKHCSBGrefine_8291:HG3_Ill_250bpfermikitraw_16180:HG3_Ill_150bpfermikitraw_15712:HG3_10X_allpass_2466:HG2_PB_SVrefine2PBcRplusDovetail_1937:HG2_PB_SVrefine2PB10Xhap12_9011:HG2_Ill_manta_3484:HG2_Ill_SVrefine2DISCOVARplusDovetail_2240:HG2_Ill_MetaSV_828:HG2_Ill_GATKHC_20002:HG2_Ill_GATKHCSBGrefine_8389:HG2_10X_allpass_2020:HG2_10X_SVrefine210Xhap12_8744:HG3_Ill_Spiral_12980;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8744:HG2_10X_allpass_2020:HG2_Ill_GATKHCSBGrefine_8389:HG2_Ill_GATKHC_20002:HG2_Ill_MetaSV_828:HG2_Ill_SVrefine2DISCOVARplusDovetail_2240:HG2_Ill_manta_3484:HG2_PB_SVrefine2PB10Xhap12_9011:HG2_PB_SVrefine2PBcRplusDovetail_1937:HG3_10X_allpass_2466:HG3_Ill_150bpfermikitraw_15712:HG3_Ill_250bpfermikitraw_16180:HG3_Ill_GATKHCSBGrefine_8291:HG3_Ill_GATKHC_19855:HG3_Ill_SVrefine2DISCOVARDovetail_9102:HG3_Ill_manta_2842:HG3_Ill_scalpel_11977:HG3_PB_SVrefine2PBcRDovetail_5870:HG4_PB_SVrefine2Falcon1Dovetail_7638;NumExactMatchSVs=19;ClusterMaxShiftDist=0.015748;ClusterMaxSizeDiff=0.015748;ClusterMaxEditDist=0.031746;PBcalls=9;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=13;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-126;DistBack=47;DistForward=-56;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=69;REFWIDENED=11:80242903-80243097;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=646.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:33:0|1:18:0:3:36:0|1:33:0:0:19:0/1:32:18:./.:.:.:.:.:.
chr11	81148130	HG3_Ill_SVrefine2DISCOVARDovetail_9107	AGTTTTACTTTCTCGGGTAATAAATCCCTTTTCTTGGGGAAAATACCCAAAATATATGTTACTAATGGAAAGCTAATAATATCTAATTCCAAGATGATACTACTCTTATTCTTAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8747:HG3_PB_HySA_18841:HG3_PB_pbsv_12204:HG2_PB_pbsv_12514:HG4_PB_pbsv_12497:HG4_PB_SVrefine2Falcon1Dovetail_7639:HG4_Ill_SVrefine2DISCOVARDovetail_8873:HG4_10X_allpass_2368:HG3_PB_SVrefine2PBcRDovetail_5872:HG3_PB_SVrefine2Falcon1Dovetail_7607:HG3_Ill_SVrefine2DISCOVARDovetail_9107:HG3_Ill_250bpfermikitraw_16185:HG3_Ill_150bpfermikitraw_15720:HG3_10X_allpass_2467:HG2_PB_SVrefine2PBcRplusDovetail_1938:HG2_PB_SVrefine2PB10Xhap12_9012:HG2_PB_SVrefine2Falcon1plusDovetail_2033:HG2_PB_HySA_22708:HG2_Ill_SVrefine2DISCOVARplusDovetail_2243:HG2_10X_allpass_2021;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8747:HG4_PB_SVrefine2Falcon1Dovetail_7639:HG4_Ill_SVrefine2DISCOVARDovetail_8873:HG4_10X_allpass_2368:HG3_PB_SVrefine2PBcRDovetail_5872:HG3_PB_SVrefine2Falcon1Dovetail_7607:HG3_Ill_SVrefine2DISCOVARDovetail_9107:HG3_Ill_250bpfermikitraw_16185:HG3_Ill_150bpfermikitraw_15720:HG3_10X_allpass_2467:HG2_PB_SVrefine2PBcRplusDovetail_1938:HG2_PB_SVrefine2PB10Xhap12_9012:HG2_PB_SVrefine2Falcon1plusDovetail_2033:HG2_PB_HySA_22708:HG2_Ill_SVrefine2DISCOVARplusDovetail_2243:HG2_10X_allpass_2021;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0262009;ClusterMaxSizeDiff=0.0262009;ClusterMaxEditDist=0.0264317;PBcalls=11;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=4;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-114;DistBack=0;DistForward=-114;DistMin=-114;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=116;REFWIDENED=11:81148131-81148360;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:52:0|1:25:1:2:55:./.:26:1:0:2:0/1:33:19:./.:.:.:.:.:.
chr11	81556171	HG3_Ill_manta_2843	TAGGTTCATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_12989:HG2_10X_allpass_2022:HG2_PB_assemblyticsfalcon_4591:HG2_PB_assemblyticsPBcR_4463:HG2_PB_HySA_22714:HG4_Ill_Krunchall_17260:HG3_Ill_Krunchall_16649:HG2_Ill_Krunchall_16972:HG4_PB_assemblyticsfalcon_4487:HG3_PB_assemblyticsfalcon_4596:HG2_PB_pbsv_12518:HG3_PB_pbsv_12208:HG3_PB_HySA_18845:HG4_Ill_MetaSV_864:HG2_Ill_tnscope_1399:HG4_PB_pbsv_12500:HG4_PB_SVrefine2PBcRDovetail_6308:HG4_PB_SVrefine2Falcon1Dovetail_7642:HG4_Ill_manta_2958:HG4_Ill_GATKHCSBGrefine_8638:HG4_10X_allpass_2369:HG3_PB_SVrefine2PBcRDovetail_5873:HG3_PB_SVrefine2Falcon1Dovetail_7608:HG3_Ill_manta_2843:HG3_Ill_SVrefine2DISCOVARDovetail_9110:HG3_Ill_MetaSV_915:HG3_Ill_GATKHCSBGrefine_8294:HG3_10X_allpass_2468:HG2_PB_SVrefine2PBcRplusDovetail_1941:HG2_PB_SVrefine2PB10Xhap12_9016:HG2_PB_SVrefine2Falcon2Bionano_6103:HG2_PB_SVrefine2Falcon1plusDovetail_2036:HG2_Ill_manta_3486:HG2_Ill_breakscan11_1800:HG2_Ill_SVrefine2DISCOVARplusDovetail_2244:HG2_Ill_MetaSV_830:HG2_Ill_GATKHCSBGrefine_8391:HG2_10X_SVrefine210Xhap12_8749;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8749:HG2_Ill_GATKHCSBGrefine_8391:HG2_Ill_MetaSV_830:HG2_Ill_SVrefine2DISCOVARplusDovetail_2244:HG2_Ill_breakscan11_1800:HG2_Ill_manta_3486:HG2_PB_SVrefine2Falcon1plusDovetail_2036:HG2_PB_SVrefine2Falcon2Bionano_6103:HG2_PB_SVrefine2PB10Xhap12_9016:HG2_PB_SVrefine2PBcRplusDovetail_1941:HG3_10X_allpass_2468:HG3_Ill_GATKHCSBGrefine_8294:HG3_Ill_MetaSV_915:HG3_Ill_SVrefine2DISCOVARDovetail_9110:HG3_Ill_manta_2843:HG3_PB_SVrefine2Falcon1Dovetail_7608:HG3_PB_SVrefine2PBcRDovetail_5873:HG4_10X_allpass_2369:HG4_Ill_GATKHCSBGrefine_8638:HG4_Ill_manta_2958:HG4_PB_SVrefine2Falcon1Dovetail_7642:HG4_PB_SVrefine2PBcRDovetail_6308:HG4_PB_pbsv_12500;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0662983;ClusterMaxSizeDiff=0.0662983;ClusterMaxEditDist=0.0662983;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-367;DistBack=41153;DistForward=-362;DistMin=-362;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=11:81556172-81556550;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:0:9:0:11:1/1:0:24:0:19:1/1:0:55:1/1:2:21:.:.:0.587196
chr11	84723183	HG2_10X_allpass_2023	TAATCTATGTGAAATGACCTAGATAAAAGAGAAAAGTATGATATACATTAATATCTTTTCTGTGTGTGACTTGATCAAAAGTTTTATGGATCAGAGTAAGAGATATGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAAGCTAAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9023:HG2_PB_SVrefine2Falcon1plusDovetail_2043:HG2_Ill_manta_3489:HG2_PB_PB10Xdip_6272:HG4_Ill_Spiral_993:HG2_Ill_Spiral_856:HG4_PB_HySA_18205:HG2_PB_HySA_22744:HG4_Ill_svaba_15659:HG2_PB_pbsv_12525:HG2_Ill_svaba_15587:HG2_Ill_scalpel_11810:HG2_10X_allpass_2023:HG4_Ill_Krunchall_17295:HG2_Ill_Krunchall_17000:HG4_PB_assemblyticsfalcon_4509:HG2_PB_assemblyticsfalcon_4614:HG4_Ill_MetaSV_868:HG4_PB_pbsv_12509:HG4_PB_SVrefine2PBcRDovetail_6316:HG4_PB_SVrefine2Falcon1Dovetail_7649:HG4_Ill_SVrefine2DISCOVARDovetail_8885:HG2_PB_SVrefine2PBcRplusDovetail_1948;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_2023:HG2_Ill_scalpel_11810:HG2_Ill_svaba_15587:HG2_PB_pbsv_12525:HG4_Ill_svaba_15659;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0480769;ClusterMaxSizeDiff=0.0480769;ClusterMaxEditDist=0.119332;PBcalls=12;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-203;DistBack=-106;DistForward=-115;DistMin=-115;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=100;REFWIDENED=11:84723084-84723386;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:0|1:33:0:0:27:1|0:0:10:42:0:0/1:45:26:./.:.:.:.:.:.
chr11	85617810	HG2_10X_SVrefine210Xhap12_8761	CCCAGCTACTTATGAGGCCGAGATAGGAGCATCACTTGAGCCTGGAAGGTTGAGGCTGTAGTAAGCCATGTTCAGGCCGTTATACTCCAGCCTGGGTGACAGAATGAGATCCTGTCTCAAAAAATTAAATTAAATTAAATTAAATTAAATTAAATAAATAACAAATCATTTTATGGAAATGTAATAGATTTAATTTCTCTTTGTTTTAATAAATATTCATTTTTAACATTATTAAG	GCCTTTTTACT	20	PASS	ClusterIDs=HG3_PB_pbsv_12216:HG3_Ill_Krunchall_16684:HG2_Ill_Krunchall_17002:HG3_PB_SVrefine2PBcRDovetail_5879:HG3_Ill_manta_2844:HG3_Ill_SVrefine2DISCOVARDovetail_9124:HG2_PB_SVrefine2Falcon2Bionano_6110:HG2_Ill_manta_3490:HG2_Ill_SVrefine2DISCOVARplusDovetail_2264:HG2_10X_SVrefine210Xhap12_8761:HG2_PB_SVrefine2Falcon1plusDovetail_2044:HG2_Ill_SpiralSDKrefine_2920:HG3_10X_allpass_2469:HG3_Ill_Spiral_13019:HG2_Ill_Spiral_857:HG2_PB_PB10Xdip_6275:HG2_PB_SVrefine2PB10Xhap12_9024:HG2_PB_assemblyticsfalcon_4616:HG3_PB_assemblyticsfalcon_4622:HG2_Ill_MetaSV_831:HG2_PB_pbsv_12526;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8761:HG2_Ill_SVrefine2DISCOVARplusDovetail_2264:HG2_Ill_manta_3490:HG2_PB_SVrefine2Falcon2Bionano_6110:HG3_Ill_SVrefine2DISCOVARDovetail_9124:HG3_Ill_manta_2844;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.0694143;PBcalls=9;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-225;DistBack=-39;DistForward=-200;DistMin=-200;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:85617810-85618045;PctSeqSimilarity=0.9667;PctSizeSimilarity=1;PctRecOverlap=0.9576;SizeDiff=0;StartDistance=-2;EndDistance=8;GTMatch=0;TruScore=97;MatchId=651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:0|1:34:0:0:31:0|1:58:1:0:24:0/1:50:29:./.:.:.:.:.:.
chr11	86964674	HG4_Ill_250bpfermikitraw_16537	CATATATATATATATATATATATATATATATATATATATATATATATATATAT	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_858:HG4_PB_assemblyticsfalcon_4529:HG4_PB_HySA_18222:HG4_PB_pbsv_12516:HG2_PB_pbsv_12534:HG4_Ill_svaba_15673:HG4_Ill_scalpel_11522:HG4_Ill_manta_2961:HG4_Ill_Krunchall_17310:HG4_Ill_GATKHC_20048:HG4_Ill_GATKHCSBGrefine_8654:HG4_Ill_250bpfermikitraw_16537:HG4_Ill_150bpfermikitraw_15904:HG4_CG_vcfBeta_7978:HG3_Ill_svaba_15759:HG3_Ill_manta_2848:HG3_Ill_Krunchall_16695:HG3_Ill_GATKHCSBGrefine_8319:HG3_Ill_250bpfermikitraw_16237:HG3_CG_vcfBeta_6784:HG2_Ill_svaba_15601:HG2_Ill_scalpel_11819:HG2_Ill_manta_3491:HG2_Ill_breakscan11_1801:HG2_Ill_SpiralSDKrefine_2926:HG2_Ill_Krunchall_17011:HG2_Ill_GATKHC_20056:HG2_Ill_GATKHCSBGrefine_8408:HG2_Ill_250bpfermikitraw_16687:HG2_Ill_150bpfermikitraw_15737:HG2_CG_vcfBeta_7128:HG2_PB_assemblyticsPBcR_4506:HG4_Ill_Spiral_994:HG3_Ill_Spiral_13030;NumClusterSVs=34;ExactMatchIDs=HG2_CG_vcfBeta_7128:HG2_Ill_150bpfermikitraw_15737:HG2_Ill_250bpfermikitraw_16687:HG2_Ill_GATKHCSBGrefine_8408:HG2_Ill_GATKHC_20056:HG2_Ill_Krunchall_17011:HG2_Ill_SpiralSDKrefine_2926:HG2_Ill_breakscan11_1801:HG2_Ill_manta_3491:HG2_Ill_scalpel_11819:HG2_Ill_svaba_15601:HG3_CG_vcfBeta_6784:HG3_Ill_250bpfermikitraw_16237:HG3_Ill_GATKHCSBGrefine_8319:HG3_Ill_Krunchall_16695:HG3_Ill_manta_2848:HG3_Ill_svaba_15759:HG4_CG_vcfBeta_7978:HG4_Ill_150bpfermikitraw_15904:HG4_Ill_250bpfermikitraw_16537:HG4_Ill_GATKHCSBGrefine_8654:HG4_Ill_GATKHC_20048:HG4_Ill_Krunchall_17310:HG4_Ill_manta_2961:HG4_Ill_scalpel_11522:HG4_Ill_svaba_15673;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0380952;PBcalls=5;Illcalls=26;TenXcalls=0;CGcalls=3;PBexactcalls=0;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=3;HG2count=14;HG3count=7;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-52;DistBack=-34;DistForward=-13;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=11:86964675-86964740;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=652.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:51:1/1:7:27:0:21:1/1:0:29:0:24:1/1:0:60:./.:.:.:.:.:.
chr11	89932513	HG2_Ill_SpiralSDKrefine_2947	GAGTTTACTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAAGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAATAAATAAAAAAAATAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1803:HG4_10X_allpass_2374:HG2_10X_allpass_2025:HG3_PB_SVrefine2PBcRDovetail_5892:HG4_Ill_MetaSV_878:HG2_Ill_MetaSV_839:HG4_PB_pbsv_12538:HG4_Ill_Spiral_996:HG3_PB_pbsv_12242:HG3_PB_HySA_18945:HG2_Ill_tnscope_1400:HG4_PB_assemblyticsfalcon_4552:HG4_PB_SVrefine2PBcRDovetail_6331:HG4_PB_SVrefine2Falcon1Dovetail_7665:HG4_Ill_SVrefine2DISCOVARDovetail_8911:HG4_Ill_GATKHCSBGrefine_8662:HG3_PB_assemblyticsfalcon_4660:HG3_PB_SVrefine2Falcon1Dovetail_7626:HG3_Ill_manta_2851:HG3_Ill_SVrefine2DISCOVARDovetail_9144:HG3_Ill_GATKHCSBGrefine_8329:HG3_10X_allpass_2473:HG2_PB_pbsv_12552:HG2_PB_assemblyticsfalcon_4655:HG2_PB_SVrefine2Falcon2Bionano_6123:HG2_PB_SVrefine2Falcon1plusDovetail_2057:HG2_Ill_manta_3494:HG2_Ill_SpiralSDKrefine_2947:HG2_Ill_SVrefine2DISCOVARplusDovetail_2282:HG2_Ill_GATKHCSBGrefine_8416:HG2_10X_SVrefine210Xhap12_8774;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8774:HG2_Ill_GATKHCSBGrefine_8416:HG2_Ill_SVrefine2DISCOVARplusDovetail_2282:HG2_Ill_SpiralSDKrefine_2947:HG2_Ill_manta_3494:HG2_PB_SVrefine2Falcon1plusDovetail_2057:HG2_PB_SVrefine2Falcon2Bionano_6123:HG2_PB_assemblyticsfalcon_4655:HG2_PB_pbsv_12552:HG3_10X_allpass_2473:HG3_Ill_GATKHCSBGrefine_8329:HG3_Ill_SVrefine2DISCOVARDovetail_9144:HG3_Ill_manta_2851:HG3_PB_SVrefine2Falcon1Dovetail_7626:HG3_PB_assemblyticsfalcon_4660:HG4_Ill_GATKHCSBGrefine_8662:HG4_Ill_SVrefine2DISCOVARDovetail_8911:HG4_PB_SVrefine2Falcon1Dovetail_7665:HG4_PB_SVrefine2PBcRDovetail_6331:HG4_PB_assemblyticsfalcon_4552;NumExactMatchSVs=20;ClusterMaxShiftDist=0.18637;ClusterMaxSizeDiff=0.18637;ClusterMaxEditDist=0.18637;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=1135;DistForward=-331;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=11:89932514-89932861;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=654.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:10:0|1:26:0:0:12:1|0:0:22:42:0:0/1:26:20:0/1:24:10:.:.:.
chr11	90568073	HG4_PB_SVrefine2Falcon1Dovetail_7669	GTCTGTGCTCTCAGGGCACAGTAGAGTTAGATCACTTGACGAAGGTGCACAAAGTGACCATGCATTCAGAACTATCCTTTACTAGCTTTGCTTTGTTGTAATTTCCGAGTCATAAAGTCAGGTCATCTAAGCAGTAGTCCGTAGAAAAATGGGCTTGGTACAACTGTGAAAGAGCCCAAGAAGGACCAGTGCATACAACTAAGTTCTGTTAACGGACAGCTTAGACATCCTAGTTGAGCAACTATCTGATTCAATGCTGCAGTTGCTGATTTTACATGCATGATATACATGCTAATGTCGTTGTAAACTCAAACTATTGATAACATAGTGCACTTTAATAGTTTTCATAAATCAGCATTTCTAAAGCATTGCCTTTAATTAAATATGTGTCCTTTCTTCCTTTTGATCATTTTCAGGACTGCATCTATTTGCACTCCCATTCCCTTACATAAAAATTATGAATGAGATAATAAAATATATATAGTAATGAATATAAATTCCCATTGAATTCTGGTAAAATCATTATGGATACTTTTATAAAATTAAGATCAGTTTTAAAACCAAGTTTTTAAGAGGTCAGATAATGTTATGTATATATAGAGAAAGGAAAATAATGATAGAAATAGGTGAATAATATATAATAATTTTATGTAATTGAATTAATAACCAGAGAAAAATTCAAAAACCACAAAGCAGTTATAAATCAAATTTAAATTTATTTAGTTTTCAAAGGTATACATGAATAGGAGATTGACTTGGCTAAGTCCTTATGTCTGGGTTAAATCACTGGACTGTTAGGCTTCTTACACAATATCACTAATGTGACTCAATGAATTAATATAATTTAGAAGCACAGAGAGCAGGACAATGTGTGCCACATGGATGGAAAACACATGAAGACAAAAGCATGTTCTGAGTTTTACCAATTCCATACCTCTCATTCCTCAAGCTCCGAATTTTGTATTTGCTAATAAAAGTAAATATCTGAAGATATAAAGCTGGCTTTCAATTGTGGACTTTTATAACAACTTCTATAAGCCATTATGAACTACCTCAGATTTAAGAGCCTATTTCTTCTAGTCCAGACACTAAATAGTTTTACTTGCTATATTGTTGGGTTTATGTAGACAATGCTGAAAGGAGACATTTCACAGCTCTGCATTAACAAAATGCTTATGCAAATAAAGATTATGACTTAGCAAAAGAGCCAAAGGGAACATAAAAAGGCTCATTGTGAGAATGCAGTCTGCTCCTACAGAGGCTAATTAGCAGAAGACCTCCAGACCTTTTGTGTCTTGGACACCAGAATGAGTATAATTTTTCTGGTGCACATTCATTGGATGAGTTAGGTGCACTTACTAGTTCAATACTACAACAAGTTGTTGCCATCCTGGATTATGTTATTAGTACCCAGCCTGGCCTCATGTTTCTGTCAACAATTGAAGAAAACTGAAATGACTGGGAGAAAAATACGTTGCAGTATCAAAATGACACTGTGTTTTTCATTGGCAGTGTAGTCCTCTATTGTCATGTGGATAATCAATTCACATTCAAAGTTGGTCACTCTCTGCTAACACTCATGGCCACAGATGTTGTCGATGATCATAAATGAAGTCAATGCCTCTTAAAAATCTTGCCACACTCTATTTCTCAGTTACCTAATGTATCAGACCATTTGGACTGCCTTTTTAGTCATTAAGAATTTATAGTTTCCTGGGGTTCCCTGGGTAACCTTTCATTTTAAGAAAACAGAATTGGGAATTACAGTGTCTCAGAAATAGCTACCATTTCAAAAGCTAAAAGCTCATTTAAATTATGGAATGTGAAAATGTGAGTCCTAAAAATACCAACAATTTATATTTATGTGTAGAGTTTTAGTTAACTATAAAAAGATGCAGATTCTTTTTCAGAAGTGTAGGTGCAATTGATCATTGGCCCTTAACTCTGTTTCTTGACACTATAAGTGTAAAACTAATGTCATGATTTTTTTTTAAATAGAAGTCTCAGTGGATTATATCGTTTTACATTAATTCCTGCCTATATGTAAACGTTAAATGGACTTTGCTTAACTTCATATAATATCTTCTATGTTTACACTTTATAATTTCATGGGAAACTTGTTTCTTAGGTTCTGAAAACATAGCTTAACTTATCAAAAATTATTATGAAAGTGAAGACAATGAATTTTGTAAAAATCTTTGTTATATTCGAGGGTGGGAGGAATAATGTCTATAAGAAAACAAAAAAAATTGATGGTTAAAAACTCCAATTAACATACTAATAATTTTATAAATCAATACTTAGCAAACTAACTGACTTTATTGGATTAACTGAATTGTTTAAACACATTGCCTTGTACCTGCATGCTTGATAGAGCCATACATCCCGTTCCTAGAGTGGTTAAAGTCATATTTCAGAAAATAATAAAGCAATGAATATGAATATGGGGGTGAGATTTATCATAAAAAGAGTAGAAGTGATTGTATTTTAAAGGGATGTCCAAAGTCCTTTCACCTTTTTTTTTAATTCTCATAACAGTCCAAGATAAACAAGGCAAGTATTTATAATATTTTCATAACAATTCACATATGCTGTAGATTAACACAGTAACTTAACACTTAGAAGATACAGATTCTTCTACCGACTGTGCCACAAATTAGATGTTTGACACACATAAACAGTTTCCCCTTCTTTGAAACTTTGCTTTACTCCTTTCATCTATAGCAGGGGTCCCCAGACTCCCGGCCCACAGACTGGTACCAGTCCATGCAGCAGGGGGTAAGCAGGGGCTAGGGAGCATCACTGCCTGAGCTCCACCTCCTGTCAGATCAGGGGTTTCCAACAACGTATCTGAGCCACCAGCTAAACTTCATGAGAGAAAGCTTTTACACATACTCTTACTTACCACTCTTTTTTTCAGTTTCTTGGCATGTAATAGACACTAAATTTGTTTAGAAACTTGTTCAATAGTGACTGGCTTGGTGATAGAGACACAATTATA	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_17034:HG4_10X_allpass_2375:HG3_PB_assemblyticsfalcon_4670:HG3_PB_SVrefine2Falcon1Dovetail_7630:HG2_10X_allpass_2027:HG4_Ill_Krunchall_17336:HG2_Ill_Krunchall_17036:HG2_PB_assemblyticsPBcR_4538:HG2_Ill_tnscope_1401:HG4_PB_pbsv_12542:HG4_PB_SVrefine2PBcRDovetail_6336:HG4_PB_SVrefine2Falcon1Dovetail_7669:HG4_Ill_SVrefine2DISCOVARDovetail_8916:HG4_Ill_MetaSV_880:HG2_PB_pbsv_12556:HG2_PB_SVrefine2PBcRplusDovetail_1965:HG2_PB_SVrefine2PB10Xhap12_9040:HG2_Ill_breakscan11_1804:HG2_Ill_SpiralSDKrefine_2954:HG2_Ill_SVrefine2DISCOVARplusDovetail_2287:HG2_Ill_MetaSV_841:HG2_10X_SVrefine210Xhap12_8779:HG2_Ill_Krunchall_17035:HG4_Ill_Krunchall_17335;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8779:HG2_Ill_MetaSV_841:HG2_Ill_SVrefine2DISCOVARplusDovetail_2287:HG2_Ill_SpiralSDKrefine_2954:HG2_Ill_breakscan11_1804:HG2_PB_SVrefine2PB10Xhap12_9040:HG2_PB_SVrefine2PBcRplusDovetail_1965:HG2_PB_pbsv_12556:HG4_Ill_MetaSV_880:HG4_Ill_SVrefine2DISCOVARDovetail_8916:HG4_PB_SVrefine2Falcon1Dovetail_7669:HG4_PB_SVrefine2PBcRDovetail_6336:HG4_PB_pbsv_12542;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00333667;ClusterMaxSizeDiff=0.00333667;ClusterMaxEditDist=0.0253714;PBcalls=9;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-3000;DistBack=38277;DistForward=-2999;DistMin=-2999;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=11:90568074-90571076;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=655.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:53:0|1:35:0:0:25:1|0:0:30:36:0:0/1:60:24:0/1:212:111:3146:.:.
chr11	92245997	HG4_Ill_GATKHCSBGrefine_8677	TAAGATTATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCTAGACTCCGTCTCAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_860:HG4_PB_HySA_18300:HG3_PB_pbsv_12257:HG2_PB_assemblyticsPBcR_4558:HG4_Ill_Krunchall_17366:HG3_Ill_Krunchall_16742:HG2_Ill_Krunchall_17061:HG2_PB_assemblyticsfalcon_4687:HG2_PB_HySA_22846:HG2_Ill_tnscope_1402:HG4_PB_pbsv_12554:HG4_PB_SVrefine2PBcRDovetail_6344:HG4_Ill_manta_2968:HG4_Ill_SVrefine2DISCOVARDovetail_8926:HG4_Ill_MetaSV_885:HG4_Ill_GATKHCSBGrefine_8677:HG4_10X_allpass_2376:HG3_PB_SVrefine2PBcRDovetail_5904:HG3_Ill_manta_2856:HG3_Ill_SVrefine2DISCOVARDovetail_9162:HG3_Ill_MetaSV_933:HG3_Ill_GATKHCSBGrefine_8340:HG3_10X_allpass_2475:HG2_PB_pbsv_12569:HG2_PB_SVrefine2PBcRplusDovetail_1973:HG2_PB_SVrefine2PB10Xhap12_9049:HG2_PB_SVrefine2Falcon2Bionano_6133:HG2_PB_SVrefine2Falcon1plusDovetail_2068:HG2_Ill_scalpel_11856:HG2_Ill_manta_3500:HG2_Ill_SVrefine2DISCOVARplusDovetail_2303:HG2_Ill_MetaSV_846:HG2_Ill_GATKHCSBGrefine_8428:HG2_10X_allpass_2028:HG2_10X_SVrefine210Xhap12_8788:HG2_Ill_breakscan11_1805:HG3_Ill_Spiral_13072;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8788:HG2_10X_allpass_2028:HG2_Ill_GATKHCSBGrefine_8428:HG2_Ill_MetaSV_846:HG2_Ill_SVrefine2DISCOVARplusDovetail_2303:HG2_Ill_manta_3500:HG2_Ill_scalpel_11856:HG2_PB_SVrefine2Falcon1plusDovetail_2068:HG2_PB_SVrefine2Falcon2Bionano_6133:HG2_PB_SVrefine2PB10Xhap12_9049:HG2_PB_SVrefine2PBcRplusDovetail_1973:HG2_PB_pbsv_12569:HG3_10X_allpass_2475:HG3_Ill_GATKHCSBGrefine_8340:HG3_Ill_MetaSV_933:HG3_Ill_SVrefine2DISCOVARDovetail_9162:HG3_Ill_manta_2856:HG3_PB_SVrefine2PBcRDovetail_5904:HG4_10X_allpass_2376:HG4_Ill_GATKHCSBGrefine_8677:HG4_Ill_MetaSV_885:HG4_Ill_SVrefine2DISCOVARDovetail_8926:HG4_Ill_manta_2968:HG4_PB_SVrefine2PBcRDovetail_6344:HG4_PB_pbsv_12554;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0629139;ClusterMaxSizeDiff=0.0629139;ClusterMaxEditDist=0.0662252;PBcalls=13;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-304;DistBack=24380;DistForward=-257;DistMin=-257;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=11:92245998-92246310;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=656.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:89:1/1:7:23:1:16:1/1:0:21:0:24:1/1:0:40:0/1:2:9:.:.:.
chr11	93021140	HG3_Ill_Cortex_678	TCGTTGTTTAAGGAAACAGTGGGTCTAGGGAACAGCTGGCACTTAGCAGGAGACAGTGAGGGGGTCACACCCGGATGGCAGTGAGTAGTCAGCTTCCAGGTCTAGTGAGGCCATGAAGTGGACAATTTCTTATAAATTTTCTCTTGAGTAAACACATTTATGTGGTGAAACTACCCCGGACATAGATTGCCAGGTGTGCGGTGTGAGCACTCTGTCAGACACTGCAGGCTGGTTGCCTTGATTCCGTGCCAACTCCTTGCATGGCTGTGCATGCTGCATACCTGAGAATAGAAAGGCAAGACTACATCCTCAATCTCCCTTCAGCTCTGGTTCTGCACCTGATCTCAATTCTGTCAGGCAGATAGCCCCATGCCAGATTTGGGAGGAAGTGAACATCATGCATAAGAGGTCACACTGCTGCTGCTCCTGCTGCTGCTGCTGCTTTGTGCAAGCACAGTAGTCAGGACACTTGTTTTTCTGAGCATCTGTAGCAGAGGTCTCAGGGTCTAGTCATTAGTTCCCTGGTTATTGACAGACATGGTGCAAAGTATCCCTTTTTCTTACGCAGATCATGGCCAAGGTAAAGTGGCTCCAGGATGAAAAATCCCAGATCGTTCATGATTTTAGGTCTCTTGTAACTAATAAAAAAGTTTAAAAGTCACTTTAGGATGTAAACACAGCGTCAATTCAATCATTTAAATCTTTGGTCCCAGATAATAATTACAATTCTAAACTTGATTAAATTTAAAATCTTCTCCCCTCCCACAACTAAATTAGAGCCTGCTATAGGCTGGCCACTTGCAGAGATTAAAGAAGCTGGTTCTTCTTCTCTTCTCTGTTCTTCTTTCTCTAGCTTGCGTTCCAGCTATTGACCCCTCTGGGACTGGTGATCAAGGAGCTTAGAAAGGAAAGAGGATAGGAGAGTCCTCATTTGACTGGTAATATTGTAAGATGGCTTCACACTTGCTGGGTCTGGCAGATGTTTAAAGTTGACTCACTTTGGGGTTTCTTTAGAGAACTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8793:HG2_PB_PB10Xdip_6370:HG4_Ill_GATKHCSBGrefine_8681:HG3_Ill_GATKHCSBGrefine_8344:HG2_10X_allpass_2030:HG2_Ill_breakscan11_1807:HG4_PB_SVrefine2PBcRDovetail_6348:HG4_Ill_Cortex_639:HG3_PB_assemblyticsfalcon_4700:HG3_PB_SVrefine2Falcon1Dovetail_7641:HG3_Ill_Cortex_678:HG2_PB_SVrefine2PB10Xhap12_9053:HG2_PB_SVrefine2Falcon1plusDovetail_2071:HG2_Ill_Cortex_1533:HG3_Ill_MetaSV_936:HG2_Ill_tnscope_1403:HG2_Ill_MetaSV_849:HG4_Ill_Krunchall_17373:HG2_Ill_Krunchall_17065:HG2_PB_assemblyticsfalcon_4693:HG4_Ill_MetaSV_888:HG4_Ill_Krunchall_17372:HG2_PB_assemblyticsPBcR_4564:HG4_PB_pbsv_12559:HG4_10X_allpass_2377:HG3_PB_pbsv_12260:HG3_10X_allpass_2477:HG2_PB_pbsv_12572:HG4_PB_SVrefine2PBcRDovetail_6347:HG3_PB_SVrefine2PBcRDovetail_5909:HG3_Ill_SVrefine2DISCOVARDovetail_9165:HG2_PB_SVrefine2PBcRplusDovetail_1976:HG2_PB_SVrefine2Falcon2Bionano_6136;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_Cortex_1533:HG2_PB_SVrefine2Falcon1plusDovetail_2071:HG2_PB_SVrefine2PB10Xhap12_9053:HG3_Ill_Cortex_678:HG3_PB_SVrefine2Falcon1Dovetail_7641:HG3_PB_assemblyticsfalcon_4700:HG4_Ill_Cortex_639:HG4_PB_SVrefine2PBcRDovetail_6348;NumExactMatchSVs=8;ClusterMaxShiftDist=0.102775;ClusterMaxSizeDiff=0.102775;ClusterMaxEditDist=0.102775;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-1020;DistBack=0;DistForward=-923;DistMin=-923;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:93021140-93022160;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9971;SizeDiff=0;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=99;MatchId=657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:45:33:./.:39:8:9:25:0|1:41:0:0:29:0/1:60:12:0/1:87:41:1071:.:.
chr11	93102800	HG2_Ill_scalpel_11860	TAAAGAATGGATTTACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTTCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACGGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8794:HG3_PB_HySA_18979:HG2_PB_pbsv_12573:HG4_PB_assemblyticsfalcon_4592:HG3_Ill_Krunchall_16748:HG3_PB_assemblyticsfalcon_4701:HG2_PB_assemblyticsPBcR_4565:HG2_Ill_breakscan11_1808:HG4_PB_pbsv_12560:HG2_PB_HySA_22856:HG4_Ill_MetaSV_889:HG3_Ill_MetaSV_937:HG2_Ill_tnscope_1404:HG2_Ill_MetaSV_850:HG4_PB_SVrefine2PBcRDovetail_6349:HG4_PB_SVrefine2Falcon1Dovetail_7681:HG4_PB_HySA_18307:HG4_Ill_scalpel_11564:HG4_Ill_manta_2969:HG4_Ill_SVrefine2DISCOVARDovetail_8929:HG4_Ill_GATKHCSBGrefine_8682:HG4_10X_allpass_2378:HG3_PB_pbsv_12261:HG3_PB_SVrefine2PBcRDovetail_5910:HG3_PB_SVrefine2Falcon1Dovetail_7642:HG3_Ill_scalpel_12060:HG3_Ill_manta_2857:HG3_Ill_SVrefine2DISCOVARDovetail_9166:HG3_Ill_GATKHCSBGrefine_8345:HG3_10X_allpass_2478:HG2_PB_assemblyticsfalcon_4694:HG2_PB_SVrefine2PBcRplusDovetail_1977:HG2_PB_SVrefine2PB10Xhap12_9054:HG2_PB_SVrefine2Falcon2Bionano_6137:HG2_PB_SVrefine2Falcon1plusDovetail_2072:HG2_Ill_scalpel_11860:HG2_Ill_manta_3501:HG2_Ill_SVrefine2DISCOVARplusDovetail_2305:HG2_Ill_GATKHCSBGrefine_8432:HG2_10X_allpass_2031;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8794:HG4_PB_SVrefine2PBcRDovetail_6349:HG4_PB_SVrefine2Falcon1Dovetail_7681:HG4_PB_HySA_18307:HG4_Ill_scalpel_11564:HG4_Ill_manta_2969:HG4_Ill_SVrefine2DISCOVARDovetail_8929:HG4_Ill_GATKHCSBGrefine_8682:HG4_10X_allpass_2378:HG3_PB_pbsv_12261:HG3_PB_SVrefine2PBcRDovetail_5910:HG3_PB_SVrefine2Falcon1Dovetail_7642:HG3_Ill_scalpel_12060:HG3_Ill_manta_2857:HG3_Ill_SVrefine2DISCOVARDovetail_9166:HG3_Ill_GATKHCSBGrefine_8345:HG3_10X_allpass_2478:HG2_PB_assemblyticsfalcon_4694:HG2_PB_SVrefine2PBcRplusDovetail_1977:HG2_PB_SVrefine2PB10Xhap12_9054:HG2_PB_SVrefine2Falcon2Bionano_6137:HG2_PB_SVrefine2Falcon1plusDovetail_2072:HG2_Ill_scalpel_11860:HG2_Ill_manta_3501:HG2_Ill_SVrefine2DISCOVARplusDovetail_2305:HG2_Ill_GATKHCSBGrefine_8432:HG2_10X_allpass_2031;NumExactMatchSVs=27;ClusterMaxShiftDist=0.096;ClusterMaxSizeDiff=0.096;ClusterMaxEditDist=0.096;PBcalls=18;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=80639;DistForward=-304;DistMin=-304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=11:93102801-93103133;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=658.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:73:1/1:0:43:0:30:./.:0:25:1:18:1/1:0:30:0/1:2:10:.:.:.
chr11	93154136	HG4_Ill_MetaSV_890	TGAAAATGGCCATACCGGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGTCGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGAAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAAACAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGACTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACCTTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTACAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAATAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACGCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_851:HG4_PB_assemblyticsfalcon_4593:HG2_PB_assemblyticsfalcon_4695:HG3_PB_assemblyticsfalcon_4702:HG2_PB_assemblyticsPBcR_4566:HG3_10X_allpass_2479:HG4_PB_pbsv_12561:HG4_PB_SVrefine2PBcRDovetail_6350:HG4_PB_SVrefine2Falcon1Dovetail_7682:HG4_Ill_SVrefine2DISCOVARDovetail_8930:HG4_Ill_MetaSV_890:HG3_PB_SVrefine2PBcRDovetail_5911:HG3_PB_SVrefine2Falcon1Dovetail_7643:HG3_Ill_SVrefine2DISCOVARDovetail_9167:HG3_Ill_MetaSV_938:HG2_PB_pbsv_12574:HG2_PB_SVrefine2PBcRplusDovetail_1978:HG2_PB_SVrefine2PB10Xhap12_9055:HG2_PB_SVrefine2Falcon2Bionano_6138:HG2_PB_SVrefine2Falcon1plusDovetail_2073:HG2_Ill_SVrefine2DISCOVARplusDovetail_2306:HG3_PB_pbsv_12262:HG2_10X_allpass_2032;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2306:HG2_PB_SVrefine2Falcon1plusDovetail_2073:HG2_PB_SVrefine2Falcon2Bionano_6138:HG2_PB_SVrefine2PB10Xhap12_9055:HG2_PB_SVrefine2PBcRplusDovetail_1978:HG2_PB_pbsv_12574:HG3_Ill_MetaSV_938:HG3_Ill_SVrefine2DISCOVARDovetail_9167:HG3_PB_SVrefine2Falcon1Dovetail_7643:HG3_PB_SVrefine2PBcRDovetail_5911:HG4_Ill_MetaSV_890:HG4_Ill_SVrefine2DISCOVARDovetail_8930:HG4_PB_SVrefine2Falcon1Dovetail_7682:HG4_PB_SVrefine2PBcRDovetail_6350;NumExactMatchSVs=14;ClusterMaxShiftDist=0.166743;ClusterMaxSizeDiff=0.166743;ClusterMaxEditDist=0.166743;PBcalls=15;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-6061;DistBack=28027;DistForward=-3642;DistMin=-3642;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=11:93154137-93160211;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:0:21:0:14:1/1:0:9:0:8:1/1:0:14:0/1:63:336:6154:.:.
chr11	93578005	HG3_PB_SVrefine2Falcon1Dovetail_7644	CTGCTACCCCAGCTCTTGGCAAGCTGTTCCAGGCACAGTGCGTGCTCAGGAACCATTTATTGAGCCAAACCAGACTTCCCAGCAAAGCAGCCTTGTCTTCTGCCCTCAGCCTTGTGGGAAAGTATTTTCAGGCTTGTCAGGATAAAACCACAAAGACACAGGTGAGACTCTAAGACACAACGTTGGGTGTTCTGAGAACAGCAGGAGGG	TTC	20	PASS	ClusterIDs=HG2_Ill_scalpel_11870:HG4_Ill_GATKHCSBGrefine_8685:HG3_Ill_GATKHCSBGrefine_8348:HG2_Ill_GATKHCSBGrefine_8435:HG4_PB_HySA_18312:HG3_PB_HySA_18985:HG2_PB_HySA_22862:HG4_PB_SVrefine2PBcRDovetail_6352:HG4_PB_SVrefine2Falcon1Dovetail_7683:HG4_Ill_manta_2971:HG4_Ill_SVrefine2DISCOVARDovetail_8933:HG3_PB_assemblyticsfalcon_4708:HG3_PB_SVrefine2PBcRDovetail_5912:HG3_PB_SVrefine2Falcon1Dovetail_7644:HG3_Ill_manta_2858:HG3_Ill_SVrefine2DISCOVARDovetail_9168:HG2_PB_assemblyticsPBcR_4574:HG2_PB_SVrefine2PBcRplusDovetail_1979:HG2_PB_SVrefine2PB10Xhap12_9056:HG2_PB_SVrefine2Falcon2Bionano_6140:HG2_PB_SVrefine2Falcon1plusDovetail_2074:HG2_PB_PB10Xdip_6374:HG2_PB_PB10Xdip_6373:HG2_Ill_manta_3503:HG2_Ill_SVrefine2DISCOVARplusDovetail_2309:HG2_10X_SVrefine210Xhap12_8796:HG2_Ill_SpiralSDKrefine_2976:HG2_Ill_MetaSV_853:HG4_Ill_Spiral_998:HG3_Ill_Spiral_13087:HG2_Ill_Spiral_861:HG4_PB_assemblyticsfalcon_4600:HG2_PB_assemblyticsfalcon_4702:HG3_PB_pbsv_12265:HG2_PB_pbsv_12576:HG4_10X_allpass_2380:HG3_10X_allpass_2480:HG2_10X_allpass_2033:HG4_Ill_MetaSV_892:HG3_Ill_MetaSV_940:HG4_PB_pbsv_12563:HG4_Ill_Krunchall_17379:HG2_Ill_Krunchall_17077:HG4_Ill_svaba_15727:HG3_Ill_svaba_15820:HG3_Ill_scalpel_12067:HG2_Ill_svaba_15652;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8796:HG2_Ill_SVrefine2DISCOVARplusDovetail_2309:HG2_Ill_manta_3503:HG2_PB_PB10Xdip_6373:HG2_PB_PB10Xdip_6374:HG2_PB_SVrefine2Falcon1plusDovetail_2074:HG2_PB_SVrefine2Falcon2Bionano_6140:HG2_PB_SVrefine2PB10Xhap12_9056:HG2_PB_SVrefine2PBcRplusDovetail_1979:HG2_PB_assemblyticsPBcR_4574:HG3_Ill_SVrefine2DISCOVARDovetail_9168:HG3_Ill_manta_2858:HG3_PB_SVrefine2Falcon1Dovetail_7644:HG3_PB_SVrefine2PBcRDovetail_5912:HG3_PB_assemblyticsfalcon_4708:HG4_Ill_SVrefine2DISCOVARDovetail_8933:HG4_Ill_manta_2971:HG4_PB_SVrefine2Falcon1Dovetail_7683:HG4_PB_SVrefine2PBcRDovetail_6352;NumExactMatchSVs=19;ClusterMaxShiftDist=0.153061;ClusterMaxSizeDiff=0.153061;ClusterMaxEditDist=0.153061;PBcalls=20;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-206;DistBack=-25;DistForward=67080;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:93578005-93578213;PctSeqSimilarity=0.9928;PctSizeSimilarity=0.9951;PctRecOverlap=0.9856;SizeDiff=1;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=99;MatchId=660.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:3:25:0:19:1/1:0:20:0:14:1/1:0:40:./.:.:.:.:.:.
chr11	93679229	HG3_Ill_MetaSV_941	AGGCTGTTGGATTCTTTTTTTTTTTTTTTTTTTTTAATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAACAGTGGAGGGAAGGTCAGCAGATAAACAAGTCAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTCTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATGTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCCACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCGGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCTGGGCGGGGGGCTGACCCCCCAACCTCCCTCCCGGACCGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCAGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGCACGGCTGGCCGGGCGGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGATTGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGTGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGCAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACCCTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGTAGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAACACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCAAGGCTGGCAGATCACTCGCGGTTAGGGGCTGGAGACCGGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAGACCAGTCAGGCGTGGCGGCGCGTGCCTGCAATTGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGCTCCGCATGAGAGGGAGACCGTGGGGAGAGTGAGAGGGAGAGGGAGAGGGAGAGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8797:HG4_10X_allpass_2381:HG3_10X_allpass_2481:HG2_10X_allpass_2034:HG2_Ill_Krunchall_17081:HG4_PB_assemblyticsfalcon_4601:HG2_PB_assemblyticsfalcon_4703:HG3_PB_assemblyticsfalcon_4709:HG2_PB_assemblyticsPBcR_4575:HG4_Ill_Krunchall_17382:HG3_Ill_Krunchall_16762:HG2_Ill_Krunchall_17080:HG3_PB_pbsv_12267:HG2_Ill_tnscope_1405:HG4_PB_pbsv_12564:HG4_PB_SVrefine2PBcRDovetail_6353:HG4_PB_SVrefine2Falcon1Dovetail_7684:HG4_Ill_SVrefine2DISCOVARDovetail_8934:HG4_Ill_MetaSV_893:HG4_Ill_GATKHCSBGrefine_8686:HG3_PB_SVrefine2PBcRDovetail_5913:HG3_PB_SVrefine2Falcon1Dovetail_7645:HG3_Ill_MetaSV_941:HG3_Ill_GATKHCSBGrefine_8349:HG2_PB_pbsv_12577:HG2_PB_SVrefine2PBcRplusDovetail_1980:HG2_PB_SVrefine2PB10Xhap12_9057:HG2_PB_SVrefine2Falcon2Bionano_6141:HG2_PB_SVrefine2Falcon1plusDovetail_2075:HG2_Ill_MetaSV_854:HG2_Ill_GATKHCSBGrefine_8436;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8797:HG4_PB_pbsv_12564:HG4_PB_SVrefine2PBcRDovetail_6353:HG4_PB_SVrefine2Falcon1Dovetail_7684:HG4_Ill_SVrefine2DISCOVARDovetail_8934:HG4_Ill_MetaSV_893:HG4_Ill_GATKHCSBGrefine_8686:HG3_PB_SVrefine2PBcRDovetail_5913:HG3_PB_SVrefine2Falcon1Dovetail_7645:HG3_Ill_MetaSV_941:HG3_Ill_GATKHCSBGrefine_8349:HG2_PB_pbsv_12577:HG2_PB_SVrefine2PBcRplusDovetail_1980:HG2_PB_SVrefine2PB10Xhap12_9057:HG2_PB_SVrefine2Falcon2Bionano_6141:HG2_PB_SVrefine2Falcon1plusDovetail_2075:HG2_Ill_MetaSV_854:HG2_Ill_GATKHCSBGrefine_8436;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0132541;ClusterMaxSizeDiff=0.0132541;ClusterMaxEditDist=0.0132541;PBcalls=15;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2194;DistBack=33801;DistForward=3264;DistMin=3264;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:93679230-93681424;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=661.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:94:1/1:0:18:0:11:1/1:0:26:0:23:1/1:0:33:1/1:2:146:2150:.:.
chr11	94091791	HG2_Ill_GATKHC_20135	AAGCTGAAGCAGGTAGTGAGTCACTTGAGGCCAGGAGTTAGAGACCAGCCT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_12580:HG4_PB_assemblyticsfalcon_4609:HG2_PB_assemblyticsfalcon_4712:HG3_PB_assemblyticsfalcon_4717:HG3_Ill_svaba_15827:HG3_Ill_scalpel_12073:HG3_Ill_Krunchall_16768:HG3_Ill_GATKHC_20010:HG3_Ill_GATKHCSBGrefine_8351:HG3_Ill_FB_10849:HG3_Ill_250bpfermikitraw_16307:HG3_Ill_150bpfermikitraw_15844:HG3_CG_vcfBeta_6807:HG3_10X_allpass_2482:HG2_Ill_svaba_15659:HG2_Ill_scalpel_11874:HG2_Ill_SpiralSDKrefine_2983:HG2_Ill_Krunchall_17088:HG2_Ill_GATKHC_20135:HG2_Ill_GATKHCSBGrefine_8438:HG2_Ill_FB_10840:HG2_Ill_250bpfermikitraw_16752:HG2_Ill_150bpfermikitraw_15804:HG2_CG_vcfBeta_7150:HG3_PB_pbsv_12270;NumClusterSVs=25;ExactMatchIDs=HG2_CG_vcfBeta_7150:HG2_Ill_150bpfermikitraw_15804:HG2_Ill_250bpfermikitraw_16752:HG2_Ill_FB_10840:HG2_Ill_GATKHCSBGrefine_8438:HG2_Ill_GATKHC_20135:HG2_Ill_Krunchall_17088:HG2_Ill_SpiralSDKrefine_2983:HG2_Ill_scalpel_11874:HG2_Ill_svaba_15659:HG3_10X_allpass_2482:HG3_CG_vcfBeta_6807:HG3_Ill_150bpfermikitraw_15844:HG3_Ill_250bpfermikitraw_16307:HG3_Ill_FB_10849:HG3_Ill_GATKHCSBGrefine_8351:HG3_Ill_GATKHC_20010:HG3_Ill_Krunchall_16768:HG3_Ill_scalpel_12073:HG3_Ill_svaba_15827:HG3_PB_assemblyticsfalcon_4717;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0196078;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=2;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=2;HG2count=12;HG3count=12;HG4count=1;NumTechs=4;NumTechsExact=4;SVLEN=-50;DistBack=19390;DistForward=67634;DistMin=19390;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=11:94091790-94091842;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=662.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:35:1|0:2:28:35:4:0|1:26:0:0:19:0/1:23:23:./.:.:.:.:.:.
chr11	95169369	HG2_PB_pbsv_12586	TAAAGAATTGTAGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGAAAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAATGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACACAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCACTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGCACCATTCCTTCAGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCGGGCAGACACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_17094:HG2_10X_allpass_2035:HG4_10X_allpass_2382:HG2_PB_assemblyticsPBcR_4588:HG4_PB_assemblyticsfalcon_4614:HG2_PB_assemblyticsfalcon_4719:HG4_Ill_GATKHCSBGrefine_8689:HG2_Ill_MetaSV_856:HG2_Ill_GATKHCSBGrefine_8442:HG4_Ill_MetaSV_895:HG2_Ill_tnscope_1406:HG4_PB_pbsv_12574:HG4_PB_SVrefine2PBcRDovetail_6357:HG4_PB_SVrefine2Falcon1Dovetail_7689:HG4_Ill_SVrefine2DISCOVARDovetail_8940:HG2_PB_pbsv_12586:HG2_PB_SVrefine2PBcRplusDovetail_1984:HG2_PB_SVrefine2PB10Xhap12_9063:HG2_PB_SVrefine2Falcon2Bionano_6146:HG2_PB_SVrefine2Falcon1plusDovetail_2079:HG2_10X_SVrefine210Xhap12_8799:HG4_Ill_Krunchall_17399:HG4_Ill_Krunchall_17398;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8799:HG2_PB_SVrefine2Falcon1plusDovetail_2079:HG2_PB_SVrefine2Falcon2Bionano_6146:HG2_PB_SVrefine2PB10Xhap12_9063:HG2_PB_SVrefine2PBcRplusDovetail_1984:HG2_PB_pbsv_12586:HG4_Ill_SVrefine2DISCOVARDovetail_8940:HG4_PB_SVrefine2Falcon1Dovetail_7689:HG4_PB_SVrefine2PBcRDovetail_6357:HG4_PB_pbsv_12574;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00363817;ClusterMaxSizeDiff=0.00363817;ClusterMaxEditDist=0.0180284;PBcalls=11;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-6051;DistBack=41567;DistForward=-6042;DistMin=-6042;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=11:95169370-95175431;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9998;PctRecOverlap=0.9982;SizeDiff=-1;StartDistance=-10;EndDistance=-11;GTMatch=0;TruScore=99;MatchId=663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:69:./.:19:5:11:17:1|0:0:24:21:0:0/1:25:14:0/1:440:224:6023:.:.
chr11	96614759	HG4_10X_allpass_2385	AGAATTATTCACTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCATGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTTTTTTTTTTTTTTTAATAGAGATAAGTTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9067:HG4_PB_assemblyticsfalcon_4620:HG2_PB_assemblyticsfalcon_4724:HG3_PB_assemblyticsfalcon_4733:HG2_PB_assemblyticsPBcR_4592:HG3_Ill_Krunchall_16782:HG2_Ill_Krunchall_17104:HG3_PB_pbsv_12280:HG2_PB_pbsv_12590:HG4_PB_pbsv_12580:HG3_PB_HySA_19002:HG2_PB_PB10Xdip_6394:HG2_PB_PB10Xdip_6393:HG4_Ill_MetaSV_899:HG3_Ill_MetaSV_947:HG2_Ill_tnscope_1407:HG4_PB_SVrefine2PBcRDovetail_6363:HG4_PB_SVrefine2Falcon1Dovetail_7694:HG4_Ill_scalpel_11587:HG4_Ill_manta_2977:HG4_Ill_SVrefine2DISCOVARDovetail_8948:HG4_Ill_GATKHCSBGrefine_8697:HG4_10X_allpass_2385:HG3_PB_SVrefine2PBcRDovetail_5921:HG3_PB_SVrefine2Falcon1Dovetail_7653:HG3_Ill_scalpel_12084:HG3_Ill_manta_2861:HG3_Ill_SVrefine2DISCOVARDovetail_9178:HG3_Ill_GATKHCSBGrefine_8359:HG3_10X_allpass_2486:HG2_PB_SVrefine2PBcRplusDovetail_1987:HG2_PB_SVrefine2PB10Xhap12_9068:HG2_PB_SVrefine2Falcon2Bionano_6149:HG2_PB_SVrefine2Falcon1plusDovetail_2084:HG2_PB_HySA_22891:HG2_Ill_scalpel_11883:HG2_Ill_manta_3507:HG2_Ill_breakscan11_1809:HG2_Ill_SpiralSDKrefine_2992:HG2_Ill_SVrefine2DISCOVARplusDovetail_2316:HG2_Ill_MetaSV_858:HG2_Ill_GATKHCSBGrefine_8448:HG2_10X_allpass_2036:HG2_10X_SVrefine210Xhap12_8802;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8802:HG2_10X_allpass_2036:HG2_Ill_GATKHCSBGrefine_8448:HG2_Ill_MetaSV_858:HG2_Ill_SVrefine2DISCOVARplusDovetail_2316:HG2_Ill_SpiralSDKrefine_2992:HG2_Ill_breakscan11_1809:HG2_Ill_manta_3507:HG2_Ill_scalpel_11883:HG2_PB_HySA_22891:HG2_PB_PB10Xdip_6393:HG4_PB_SVrefine2PBcRDovetail_6363:HG4_PB_SVrefine2Falcon1Dovetail_7694:HG4_Ill_scalpel_11587:HG4_Ill_manta_2977:HG4_Ill_SVrefine2DISCOVARDovetail_8948:HG4_Ill_GATKHCSBGrefine_8697:HG4_10X_allpass_2385:HG3_PB_SVrefine2PBcRDovetail_5921:HG3_PB_SVrefine2Falcon1Dovetail_7653:HG3_Ill_scalpel_12084:HG3_Ill_manta_2861:HG3_Ill_SVrefine2DISCOVARDovetail_9178:HG3_Ill_GATKHCSBGrefine_8359:HG3_10X_allpass_2486:HG2_PB_SVrefine2PBcRplusDovetail_1987:HG2_PB_SVrefine2PB10Xhap12_9068:HG2_PB_SVrefine2Falcon2Bionano_6149:HG2_PB_SVrefine2Falcon1plusDovetail_2084;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0839813;ClusterMaxSizeDiff=0.0839813;ClusterMaxEditDist=0.0839813;PBcalls=20;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=22;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=12471;DistForward=-233;DistMin=-233;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=11:96614760-96615100;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=664.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:39:0|1:19:1:2:47:1|0:0:28:28:0:0/1:18:23:0/1:28:5:.:.:.
chr11	97131929	HG2_Ill_GATKHCSBGrefine_8450	GTATATGTGTCTATATACATACATGTATATATGTCTACATACATGTATGTGTGTCTATATACATACATGTATATATGTCTACATACATACAGGTATA	G	20	PASS	ClusterIDs=HG4_Ill_Krunchall_17414:HG2_Ill_Krunchall_17108:HG4_Ill_svaba_15748:HG4_Ill_manta_2978:HG4_Ill_Krunchall_17415:HG4_Ill_GATKHC_20153:HG4_Ill_GATKHCSBGrefine_8699:HG4_Ill_250bpfermikitraw_16621:HG4_Ill_150bpfermikitraw_15984:HG2_Ill_svaba_15678:HG2_Ill_SpiralSDKrefine_2996:HG2_Ill_Krunchall_17107:HG2_Ill_GATKHC_20151:HG2_Ill_GATKHCSBGrefine_8450:HG2_Ill_250bpfermikitraw_16765:HG2_Ill_150bpfermikitraw_15818:HG2_PB_pbsv_12592:HG4_PB_pbsv_12582;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15818:HG2_Ill_250bpfermikitraw_16765:HG2_Ill_GATKHCSBGrefine_8450:HG2_Ill_GATKHC_20151:HG2_Ill_Krunchall_17107:HG2_Ill_SpiralSDKrefine_2996:HG2_Ill_svaba_15678:HG4_Ill_150bpfermikitraw_15984:HG4_Ill_250bpfermikitraw_16621:HG4_Ill_GATKHCSBGrefine_8699:HG4_Ill_GATKHC_20153:HG4_Ill_Krunchall_17415:HG4_Ill_manta_2978:HG4_Ill_svaba_15748;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0752688;ClusterMaxSizeDiff=0.0748663;ClusterMaxEditDist=0.166667;PBcalls=2;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-96;DistBack=122700;DistForward=-21;DistMin=-21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=365;REFWIDENED=11:97131885-97132345;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=665.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:0|1:33:4:1:21:0|1:46:0:0:31:0/1:34:26:./.:.:.:.:.:.
chr11	97785663	HG2_Ill_SVrefine2DISCOVARplusDovetail_2325	CATATATGTATAAGTATATATGCATATATAGTATATATAAGTATATATGTAGTATATATGTATATATAGTATATATACGTATATATGTAGTATATATGTATATATAGTATATATACT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2325:HG2_PB_HySA_22900:HG4_PB_pbsv_12588:HG2_PB_pbsv_12596:HG4_PB_SVrefine2PBcRDovetail_6367:HG4_Ill_SVrefine2DISCOVARDovetail_8954:HG3_PB_SVrefine2Falcon1Dovetail_7657;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2325:HG4_PB_SVrefine2PBcRDovetail_6367:HG4_Ill_SVrefine2DISCOVARDovetail_8954:HG3_PB_SVrefine2Falcon1Dovetail_7657;NumExactMatchSVs=4;ClusterMaxShiftDist=0.127273;ClusterMaxSizeDiff=0.127273;ClusterMaxEditDist=0.127273;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-116;DistBack=13268;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=243;REFWIDENED=11:97785664-97786022;PctSeqSimilarity=0.9748;PctSizeSimilarity=0.9741;PctRecOverlap=0.906;SizeDiff=3;StartDistance=-11;EndDistance=-8;GTMatch=0;TruScore=95;MatchId=666.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:29:1|0:7:22:40:7:0/0:24:1:34:1:./.:64:6:./.:.:.:.:.:.
chr11	98112017	HG3_Ill_Cortex_686	TCACAAAAAAGAGTAATTTGTCTTTACTACAGTCATCCTTTATTAAGTTTTTGATGTCTACCCTTTCCACAAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8813:HG2_PB_pbsv_12597:HG2_PB_assemblyticsfalcon_4736:HG2_PB_assemblyticsPBcR_4603:HG3_PB_HySA_19014:HG2_PB_HySA_22903:HG3_PB_pbsv_12285:HG3_PB_SVrefine2PBcRDovetail_5925:HG3_Ill_svaba_15845:HG3_Ill_manta_2864:HG3_Ill_Krunchall_16790:HG3_Ill_GATKHC_20040:HG3_Ill_GATKHCSBGrefine_8364:HG3_Ill_Cortex_686:HG3_Ill_250bpfermikitraw_16327:HG3_Ill_150bpfermikitraw_15864:HG3_10X_allpass_2487:HG2_PB_SVrefine2PBcRplusDovetail_1991:HG2_PB_SVrefine2PB10Xhap12_9072:HG2_PB_SVrefine2Falcon2Bionano_6153:HG2_PB_SVrefine2Falcon1plusDovetail_2089:HG2_Ill_svaba_15688:HG2_Ill_manta_3510:HG2_Ill_breakscan11_1810:HG2_Ill_SpiralSDKrefine_3007:HG2_Ill_SVrefine2DISCOVARplusDovetail_2326:HG2_Ill_Krunchall_17124:HG2_Ill_GATKHC_20168:HG2_Ill_GATKHCSBGrefine_8455:HG2_Ill_Cortex_1555:HG2_Ill_250bpfermikitraw_16779:HG2_Ill_150bpfermikitraw_15831:HG2_10X_allpass_2037;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8813:HG3_PB_pbsv_12285:HG3_PB_SVrefine2PBcRDovetail_5925:HG3_Ill_svaba_15845:HG3_Ill_manta_2864:HG3_Ill_Krunchall_16790:HG3_Ill_GATKHC_20040:HG3_Ill_GATKHCSBGrefine_8364:HG3_Ill_Cortex_686:HG3_Ill_250bpfermikitraw_16327:HG3_Ill_150bpfermikitraw_15864:HG3_10X_allpass_2487:HG2_PB_SVrefine2PBcRplusDovetail_1991:HG2_PB_SVrefine2PB10Xhap12_9072:HG2_PB_SVrefine2Falcon2Bionano_6153:HG2_PB_SVrefine2Falcon1plusDovetail_2089:HG2_Ill_svaba_15688:HG2_Ill_manta_3510:HG2_Ill_breakscan11_1810:HG2_Ill_SpiralSDKrefine_3007:HG2_Ill_SVrefine2DISCOVARplusDovetail_2326:HG2_Ill_Krunchall_17124:HG2_Ill_GATKHC_20168:HG2_Ill_GATKHCSBGrefine_8455:HG2_Ill_Cortex_1555:HG2_Ill_250bpfermikitraw_16779:HG2_Ill_150bpfermikitraw_15831:HG2_10X_allpass_2037;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0694444;ClusterMaxSizeDiff=0.0694444;ClusterMaxEditDist=0.0694444;PBcalls=11;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-72;DistBack=26404;DistForward=38345;DistMin=26404;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=11:98112018-98112092;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=667.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:32:./.:19:15:6:15:1|0:0:11:35:0:0/1:33:31:./.:.:.:.:.:.
chr11	99056555	HG4_Ill_150bpfermikitraw_16003	AACGGAGAGGAAATAAAATAAAGAGAAATGTTATCACAATTTAAAAATAACCCATCAAAATT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_12605:HG2_PB_assemblyticsPBcR_4611:HG4_Ill_Krunchall_17434:HG2_PB_HySA_22911:HG4_PB_pbsv_12596:HG3_PB_pbsv_12292:HG4_Ill_GATKHC_20178:HG4_Ill_GATKHCSBGrefine_8712:HG4_Ill_250bpfermikitraw_16640:HG4_Ill_150bpfermikitraw_16003:HG3_Ill_Krunchall_16796:HG3_Ill_GATKHC_20048:HG3_Ill_GATKHCSBGrefine_8371:HG3_Ill_250bpfermikitraw_16333:HG3_Ill_150bpfermikitraw_15872:HG2_Ill_Krunchall_17133:HG2_Ill_GATKHC_20176:HG2_Ill_250bpfermikitraw_16786:HG4_Ill_Krunchall_17433:HG4_Ill_250bpfermikitraw_16639:HG2_PB_assemblyticsfalcon_4744:HG2_Ill_Krunchall_17132:HG2_Ill_250bpfermikitraw_16785:HG4_PB_HySA_18341:HG2_10X_SVrefine210Xhap12_8817:HG4_PB_SVrefine2PBcRDovetail_6372:HG4_PB_SVrefine2Falcon1Dovetail_7701:HG4_Ill_SVrefine2DISCOVARDovetail_8962:HG3_PB_SVrefine2PBcRDovetail_5930:HG3_PB_SVrefine2Falcon1Dovetail_7661:HG3_Ill_SVrefine2DISCOVARDovetail_9196:HG2_Ill_SVrefine2DISCOVARplusDovetail_2335;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_250bpfermikitraw_16786:HG2_Ill_GATKHC_20176:HG2_Ill_Krunchall_17133:HG3_Ill_150bpfermikitraw_15872:HG3_Ill_250bpfermikitraw_16333:HG3_Ill_GATKHCSBGrefine_8371:HG3_Ill_GATKHC_20048:HG3_Ill_Krunchall_16796:HG4_Ill_150bpfermikitraw_16003:HG4_Ill_250bpfermikitraw_16640:HG4_Ill_GATKHCSBGrefine_8712:HG4_Ill_GATKHC_20178:HG4_Ill_Krunchall_17434;NumExactMatchSVs=13;ClusterMaxShiftDist=0.205882;ClusterMaxSizeDiff=0.205882;ClusterMaxEditDist=0.268657;PBcalls=11;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=-61;DistBack=18970;DistForward=-60;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=198;REFWIDENED=11:99056484-99056742;PctSeqSimilarity=0.885;PctSizeSimilarity=0.8243;PctRecOverlap=0.8267;SizeDiff=-13;StartDistance=11;EndDistance=-2;GTMatch=0;TruScore=84;MatchId=668.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:67:1/1:3:33:1:28:./.:0:6:5:3:0/1:9:22:./.:.:.:.:.:.
chr11	99276322	HG2_Ill_SVrefine2DISCOVARplusDovetail_2337	TAGAATTCTGAATTCCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8819:HG4_Ill_Krunchall_17439:HG3_Ill_Krunchall_16798:HG2_PB_pbsv_12607:HG2_Ill_Krunchall_17136:HG4_PB_assemblyticsfalcon_4639:HG3_PB_assemblyticsfalcon_4755:HG2_PB_assemblyticsPBcR_4613:HG4_Ill_Krunchall_17438:HG2_Ill_Krunchall_17135:HG3_PB_pbsv_12293:HG2_PB_HySA_22913:HG4_Ill_MetaSV_913:HG3_Ill_MetaSV_954:HG2_Ill_tnscope_1412:HG4_PB_pbsv_12599:HG4_PB_SVrefine2PBcRDovetail_6374:HG4_PB_SVrefine2Falcon1Dovetail_7703:HG4_Ill_scalpel_11599:HG4_Ill_SVrefine2DISCOVARDovetail_8965:HG4_Ill_GATKHCSBGrefine_8725:HG4_10X_allpass_2388:HG3_PB_SVrefine2PBcRDovetail_5931:HG3_PB_SVrefine2Falcon1Dovetail_7662:HG3_Ill_scalpel_12097:HG3_Ill_SVrefine2DISCOVARDovetail_9199:HG3_Ill_GATKHCSBGrefine_8372:HG3_10X_allpass_2488:HG2_PB_assemblyticsfalcon_4746:HG2_PB_SVrefine2PBcRplusDovetail_1997:HG2_PB_SVrefine2PB10Xhap12_9078:HG2_PB_SVrefine2Falcon2Bionano_6157:HG2_PB_SVrefine2Falcon1plusDovetail_2094:HG2_Ill_scalpel_11899:HG2_Ill_manta_3511:HG2_Ill_SVrefine2DISCOVARplusDovetail_2337:HG2_Ill_MetaSV_869:HG2_Ill_GATKHCSBGrefine_8473:HG2_10X_allpass_2040;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8819:HG4_PB_pbsv_12599:HG4_PB_SVrefine2PBcRDovetail_6374:HG4_PB_SVrefine2Falcon1Dovetail_7703:HG4_Ill_scalpel_11599:HG4_Ill_SVrefine2DISCOVARDovetail_8965:HG4_Ill_GATKHCSBGrefine_8725:HG4_10X_allpass_2388:HG3_PB_SVrefine2PBcRDovetail_5931:HG3_PB_SVrefine2Falcon1Dovetail_7662:HG3_Ill_scalpel_12097:HG3_Ill_SVrefine2DISCOVARDovetail_9199:HG3_Ill_GATKHCSBGrefine_8372:HG3_10X_allpass_2488:HG2_PB_assemblyticsfalcon_4746:HG2_PB_SVrefine2PBcRplusDovetail_1997:HG2_PB_SVrefine2PB10Xhap12_9078:HG2_PB_SVrefine2Falcon2Bionano_6157:HG2_PB_SVrefine2Falcon1plusDovetail_2094:HG2_Ill_scalpel_11899:HG2_Ill_manta_3511:HG2_Ill_SVrefine2DISCOVARplusDovetail_2337:HG2_Ill_MetaSV_869:HG2_Ill_GATKHCSBGrefine_8473:HG2_10X_allpass_2040;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0928144;ClusterMaxSizeDiff=0.0928144;ClusterMaxEditDist=0.0928144;PBcalls=16;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-340;DistBack=16608;DistForward=2516;DistMin=2516;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=11:99276323-99276678;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:1:18:1:16:1/1:0:25:0:24:1/1:0:33:./.:2:9:.:.:.
chr11	102471846	HG3_10X_allpass_2489	GTCGGCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8833:HG2_PB_SVrefine2PB10Xhap12_9087:HG2_10X_allpass_2041:HG2_PB_assemblyticsPBcR_4638:HG3_Ill_Krunchall_16822:HG2_Ill_Krunchall_17165:HG2_PB_pbsv_12625:HG3_PB_HySA_19038:HG3_Ill_MetaSV_957:HG2_Ill_breakscan11_1811:HG2_Ill_MetaSV_872:HG3_PB_pbsv_12307:HG3_PB_SVrefine2PBcRDovetail_5938:HG3_Ill_scalpel_12111:HG3_Ill_manta_2868:HG3_Ill_GATKHCSBGrefine_8378:HG3_10X_allpass_2489:HG2_PB_SVrefine2PBcRplusDovetail_2004:HG2_PB_SVrefine2PB10Xhap12_9086:HG2_Ill_scalpel_11919:HG2_Ill_manta_3517:HG2_Ill_SVrefine2DISCOVARplusDovetail_2354:HG2_Ill_GATKHCSBGrefine_8481;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8833:HG3_PB_pbsv_12307:HG3_PB_SVrefine2PBcRDovetail_5938:HG3_Ill_scalpel_12111:HG3_Ill_manta_2868:HG3_Ill_GATKHCSBGrefine_8378:HG3_10X_allpass_2489:HG2_PB_SVrefine2PBcRplusDovetail_2004:HG2_PB_SVrefine2PB10Xhap12_9086:HG2_Ill_scalpel_11919:HG2_Ill_manta_3517:HG2_Ill_SVrefine2DISCOVARplusDovetail_2354:HG2_Ill_GATKHCSBGrefine_8481;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0852941;ClusterMaxSizeDiff=0.0852941;ClusterMaxEditDist=0.113943;PBcalls=8;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=68511;DistForward=-291;DistMin=-291;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=11:102471847-102472174;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=670.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:0|1:27:0:0:33:1|0:0:21:32:0:0/1:24:23:0/1:30:12:.:.:.
chr11	102751090	HG3_PB_SVrefine2PBcRDovetail_5941	GGTGGCTAATGCCTATAATCCCAGCACTTTGGGAGGCCAAGGAGGGAGGATTGCTTGAGCCCAGGGGTTTGACACCAGCCTGAGCAACATAATGAGACTTTGTCTCTATTTAAAAGTGTAGATATCAGCCAGACATGGTGGCATGAAGCCCAGCCGCGGCAGCACCTCTGCTCTGCGGGATCCGCTATGTCCATAGGATATTTGCCTCCCAGAATGAAAGGGAGCTCAAAGTGACCCAAATTCTCAAAGAAAAGTTTCCTTGAGCTACAGTGATCAAAGTCACTGACATTTCAGGAGGTTGAAATTAAATAGAAATTTAATTGAATTAATTAATTTAAATTGAATTTAAAATGAAATTAAAATTGAATCAGAAGAATTTAAGCAGAAGAGAACTGTTCAGCAGTACCACATGGTTAATCAGGCACTAAAAGAAGAAATCAAAGGGATGCATGGATTACAGATATTTACCTCTGTCCCCAAACGCTGACCATGCCCTTGCTGCATGGATGCTGCTGCTTTAAACCTTGGATGAACTTCACTGACACCATTCTTCCCTAGACATTCACCAAAAAATGTGTATATTTTGTTCATATACATTTCCATGTTATAATTATGGAAGATGTGTAATCCACTTGCATGTTAATTAAAGGAAACAAACAACTGAAGTTTTGAAGGGTCAAAAAAATAAAAAAATAAAAAAATGTAAAAAAAATGAAAATAAAACTATAAAAAAATAATGTTAGGGAAGAAAATGCAATATATTTGGCACAGCTGGACTGAGATTCACACATACTACATACACAGGAGAGATACTTAACATGGTACTTTCTACATAGTAGGTGTGCTGTATTATCATTAATATTAGTCTTACTATTGTTACTATTAGTATATTTTAAGCATAGTATGTTTTGCCTCATTTTTCAAGAAAGTATATAAACTTCATGGATTGTAGACCCTTTTTTAGCCTTCAAAGACCACAAAAAAAAATTGTACCACTAGACAGTTAATATAGAGCAATAGACTTTAAATAAACTGAAACAAAAGCCTGGAGATGTTATCACTGGCTAGTACAGGCAACCTGCTCACTTTTCTCCAGCAGGTAGTCCACTTTCCAAATAAATCAGGGTTCTCAGAAGCCTCTTTTGCTCTCAGCTGACTTTTTTTTTTTTTTTTTTGAAACAGAGTCTTGCTCTGTTGCCCAGGCTGGAATGCAGTGGTGCGATCTCGGCTCACTGCAACTTCCACCTCTGGGATTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTACCTGGGACTACAGGCACCCGCAGCTGCCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGATTTCACCATGTTGGCCAAGGTGGTCTTGAACTCCTAACCTCAAGTAATCCGCCTGCCTTGGCCTCCCAAAGTGGTGGGATTATAGGCGGGAGCCACCATGCCCTGTCTCAGGTACCTTTCAGTCAATCCTTACACAAGGTATTGTTCGATGGCTCCTTAAAGAGCTACCCATATTGTGGGCATCTTCATTGTCATAGACAACTCTGAAAGGCATAACTTCAAAATATTGAAGTAAGACCCTCTACTGGAAAAATGTGGAGAGCCATGCATGGACTCTCTGCTGGAGGTCTTGGGGGCATCATGGCTAGTTTGCAAGGGAGATAGTTCTTGAGGCCAGGCGCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8835:HG3_PB_pbsv_12314:HG2_Ill_Krunchall_17173:HG2_10X_allpass_2042:HG2_PB_pbsv_12629:HG3_10X_allpass_2490:HG2_PB_HySA_22950:HG2_Ill_tnscope_1413:HG3_Ill_MetaSV_958:HG2_Ill_SpiralSDKrefine_3036:HG2_Ill_MetaSV_873:HG3_PB_SVrefine2PBcRDovetail_5941:HG2_PB_SVrefine2PBcRplusDovetail_2006:HG2_PB_SVrefine2PB10Xhap12_9090:HG2_PB_SVrefine2Falcon2Bionano_6170;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8835:HG3_PB_SVrefine2PBcRDovetail_5941:HG2_PB_SVrefine2PBcRplusDovetail_2006:HG2_PB_SVrefine2PB10Xhap12_9090:HG2_PB_SVrefine2Falcon2Bionano_6170;NumExactMatchSVs=5;ClusterMaxShiftDist=0.024412;ClusterMaxSizeDiff=0.024412;ClusterMaxEditDist=0.024412;PBcalls=7;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-1698;DistBack=27904;DistForward=-1679;DistMin=-1679;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=89;REFWIDENED=11:102751091-102752877;PctSeqSimilarity=0.9688;PctSizeSimilarity=1;PctRecOverlap=0.9918;SizeDiff=0;StartDistance=-14;EndDistance=-14;GTMatch=0;TruScore=98;MatchId=671.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:33:0|1:36:4:0:28:./.:2:18:65:0:0/1:42:14:0/1:135:56:1684:.:.
chr11	103087928	HG4_Ill_svaba_15791	ATGGGAGTTAGGATTTCTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGAC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1812:HG4_Ill_Krunchall_17480:HG3_Ill_Krunchall_16832:HG2_Ill_Krunchall_17175:HG3_PB_pbsv_12315:HG2_PB_assemblyticsfalcon_4778:HG4_PB_pbsv_12619:HG2_PB_HySA_22956:HG3_Ill_MetaSV_959:HG4_PB_SVrefine2PBcRDovetail_6382:HG4_PB_SVrefine2Falcon1Dovetail_7714:HG4_Ill_svaba_15791:HG4_Ill_scalpel_11627:HG4_Ill_manta_2987:HG4_Ill_SVrefine2DISCOVARDovetail_8980:HG4_Ill_MetaSV_919:HG4_Ill_GATKHCSBGrefine_8738:HG4_Ill_250bpfermikitraw_16687:HG4_Ill_150bpfermikitraw_16042:HG4_10X_allpass_2389:HG3_PB_SVrefine2PBcRDovetail_5942:HG3_PB_SVrefine2Falcon1Dovetail_7673:HG3_Ill_svaba_15871:HG3_Ill_scalpel_12116:HG3_Ill_manta_2869:HG3_Ill_SVrefine2DISCOVARDovetail_9213:HG3_Ill_GATKHCSBGrefine_8383:HG3_10X_allpass_2491:HG2_PB_pbsv_12630:HG2_PB_SVrefine2PBcRplusDovetail_2007:HG2_PB_SVrefine2PB10Xhap12_9091:HG2_PB_SVrefine2Falcon2Bionano_6171:HG2_PB_SVrefine2Falcon1plusDovetail_2105:HG2_Ill_svaba_15716:HG2_Ill_scalpel_11925:HG2_Ill_manta_3519:HG2_Ill_SVrefine2DISCOVARplusDovetail_2357:HG2_Ill_MetaSV_874:HG2_Ill_GATKHCSBGrefine_8485:HG2_Ill_250bpfermikitraw_16825:HG2_Ill_150bpfermikitraw_15871:HG2_10X_allpass_2043:HG2_10X_SVrefine210Xhap12_8836:HG4_PB_assemblyticsfalcon_4669:HG3_PB_assemblyticsfalcon_4791:HG2_PB_assemblyticsPBcR_4647;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8836:HG2_10X_allpass_2043:HG2_Ill_150bpfermikitraw_15871:HG2_Ill_250bpfermikitraw_16825:HG2_Ill_GATKHCSBGrefine_8485:HG2_Ill_MetaSV_874:HG2_Ill_SVrefine2DISCOVARplusDovetail_2357:HG2_Ill_manta_3519:HG2_Ill_scalpel_11925:HG2_Ill_svaba_15716:HG2_PB_SVrefine2Falcon1plusDovetail_2105:HG2_PB_SVrefine2Falcon2Bionano_6171:HG2_PB_SVrefine2PB10Xhap12_9091:HG2_PB_SVrefine2PBcRplusDovetail_2007:HG2_PB_pbsv_12630:HG3_10X_allpass_2491:HG3_Ill_GATKHCSBGrefine_8383:HG3_Ill_SVrefine2DISCOVARDovetail_9213:HG3_Ill_manta_2869:HG3_Ill_scalpel_12116:HG3_Ill_svaba_15871:HG3_PB_SVrefine2Falcon1Dovetail_7673:HG3_PB_SVrefine2PBcRDovetail_5942:HG4_10X_allpass_2389:HG4_Ill_150bpfermikitraw_16042:HG4_Ill_250bpfermikitraw_16687:HG4_Ill_GATKHCSBGrefine_8738:HG4_Ill_MetaSV_919:HG4_Ill_SVrefine2DISCOVARDovetail_8980:HG4_Ill_manta_2987:HG4_Ill_scalpel_11627:HG4_Ill_svaba_15791:HG4_PB_SVrefine2Falcon1Dovetail_7714:HG4_PB_SVrefine2PBcRDovetail_6382;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0127389;ClusterMaxSizeDiff=0.0127389;ClusterMaxEditDist=0.0192308;PBcalls=16;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=21;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-156;DistBack=50208;DistForward=15914;DistMin=15914;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=11:103087929-103088100;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=672.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:1/1:1:16:0:21:1/1:0:28:0:14:1/1:0:37:./.:.:.:.:.:.
chr11	103410821	HG3_PB_pbsv_12317	TTGTAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGAGTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCGCCCGCCACTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_876:HG4_PB_assemblyticsfalcon_4672:HG3_PB_assemblyticsfalcon_4794:HG2_PB_assemblyticsfalcon_4782:HG2_PB_assemblyticsPBcR_4652:HG4_Ill_Krunchall_17482:HG3_Ill_Krunchall_16834:HG2_Ill_Krunchall_17177:HG2_PB_HySA_22959:HG4_PB_pbsv_12621:HG3_PB_HySA_19054:HG4_PB_SVrefine2PBcRDovetail_6384:HG4_PB_SVrefine2Falcon1Dovetail_7716:HG4_Ill_scalpel_11629:HG4_Ill_SVrefine2DISCOVARDovetail_8984:HG4_Ill_GATKHCSBGrefine_8740:HG4_10X_allpass_2390:HG3_PB_pbsv_12317:HG3_PB_SVrefine2PBcRDovetail_5944:HG3_PB_SVrefine2Falcon1Dovetail_7675:HG3_Ill_scalpel_12118:HG3_Ill_manta_2870:HG3_Ill_SVrefine2DISCOVARDovetail_9216:HG3_Ill_GATKHCSBGrefine_8385:HG3_10X_allpass_2492:HG2_PB_pbsv_12632:HG2_PB_SVrefine2PBcRplusDovetail_2009:HG2_PB_SVrefine2PB10Xhap12_9093:HG2_PB_SVrefine2Falcon2Bionano_6172:HG2_PB_SVrefine2Falcon1plusDovetail_2107:HG2_Ill_scalpel_11928:HG2_Ill_manta_3521:HG2_Ill_breakscan11_1813:HG2_Ill_SpiralSDKrefine_3039:HG2_Ill_SVrefine2DISCOVARplusDovetail_2359:HG2_Ill_GATKHCSBGrefine_8487:HG2_10X_allpass_2044:HG2_10X_SVrefine210Xhap12_8837:HG4_Ill_Spiral_1003:HG4_Ill_MetaSV_922:HG3_Ill_Spiral_13138:HG3_Ill_MetaSV_961:HG2_Ill_tnscope_1414:HG2_Ill_Spiral_863;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8837:HG2_10X_allpass_2044:HG2_Ill_GATKHCSBGrefine_8487:HG2_Ill_SVrefine2DISCOVARplusDovetail_2359:HG2_Ill_SpiralSDKrefine_3039:HG2_Ill_breakscan11_1813:HG2_Ill_manta_3521:HG2_Ill_scalpel_11928:HG2_PB_SVrefine2Falcon1plusDovetail_2107:HG2_PB_SVrefine2Falcon2Bionano_6172:HG2_PB_SVrefine2PB10Xhap12_9093:HG2_PB_SVrefine2PBcRplusDovetail_2009:HG2_PB_pbsv_12632:HG3_10X_allpass_2492:HG3_Ill_GATKHCSBGrefine_8385:HG3_Ill_SVrefine2DISCOVARDovetail_9216:HG3_Ill_manta_2870:HG3_Ill_scalpel_12118:HG3_PB_SVrefine2Falcon1Dovetail_7675:HG3_PB_SVrefine2PBcRDovetail_5944:HG3_PB_pbsv_12317:HG4_10X_allpass_2390:HG4_Ill_GATKHCSBGrefine_8740:HG4_Ill_SVrefine2DISCOVARDovetail_8984:HG4_Ill_scalpel_11629:HG4_PB_SVrefine2Falcon1Dovetail_7716:HG4_PB_SVrefine2PBcRDovetail_6384;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0646204;ClusterMaxSizeDiff=0.0646204;ClusterMaxEditDist=0.0646204;PBcalls=17;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=13579;DistForward=-304;DistMin=-304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=11:103410822-103411144;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:75:1/1:0:39:1:33:1/1:1:22:0:30:1/1:0:32:0/1:3:10:.:.:.
chr11	104010473	HG2_PB_SVrefine2Falcon1plusDovetail_2110	TAATAAATAACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAATAAATA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_4655:HG4_PB_assemblyticsfalcon_4677:HG3_Ill_GATKHCSBGrefine_8387:HG2_Ill_GATKHCSBGrefine_8489:HG3_Ill_manta_2871:HG2_PB_SVrefine2Falcon2Bionano_6175:HG2_Ill_manta_3522:HG2_Ill_MetaSV_880:HG3_Ill_Spiral_13146:HG2_Ill_Spiral_864:HG2_PB_pbsv_12636:HG3_PB_assemblyticsfalcon_4798:HG2_PB_assemblyticsfalcon_4787:HG3_Ill_Krunchall_16843:HG2_Ill_Krunchall_17186:HG4_Ill_MetaSV_924:HG2_Ill_tnscope_1415:HG4_PB_pbsv_12625:HG4_PB_SVrefine2PBcRDovetail_6385:HG4_PB_SVrefine2Falcon1Dovetail_7719:HG4_Ill_manta_2989:HG4_Ill_SVrefine2DISCOVARDovetail_8988:HG4_Ill_GATKHCSBGrefine_8743:HG4_10X_allpass_2392:HG3_PB_pbsv_12321:HG3_PB_SVrefine2PBcRDovetail_5947:HG3_PB_SVrefine2Falcon1Dovetail_7678:HG3_Ill_SVrefine2DISCOVARDovetail_9217:HG3_10X_allpass_2493:HG2_PB_SVrefine2Falcon1plusDovetail_2110:HG2_Ill_SVrefine2DISCOVARplusDovetail_2360:HG2_Ill_MetaSV_879:HG2_10X_allpass_2045:HG2_10X_SVrefine210Xhap12_8838:HG2_PB_SVrefine2PBcRplusDovetail_2011;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8838:HG2_10X_allpass_2045:HG2_Ill_MetaSV_879:HG2_Ill_SVrefine2DISCOVARplusDovetail_2360:HG2_PB_SVrefine2Falcon1plusDovetail_2110:HG3_10X_allpass_2493:HG3_Ill_SVrefine2DISCOVARDovetail_9217:HG3_PB_SVrefine2Falcon1Dovetail_7678:HG3_PB_SVrefine2PBcRDovetail_5947:HG3_PB_pbsv_12321:HG4_10X_allpass_2392:HG4_Ill_GATKHCSBGrefine_8743:HG4_Ill_SVrefine2DISCOVARDovetail_8988:HG4_Ill_manta_2989:HG4_PB_SVrefine2Falcon1Dovetail_7719:HG4_PB_SVrefine2PBcRDovetail_6385:HG4_PB_pbsv_12625;NumExactMatchSVs=17;ClusterMaxShiftDist=0.179837;ClusterMaxSizeDiff=0.179837;ClusterMaxEditDist=0.228731;PBcalls=14;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-344;DistBack=5563;DistForward=-345;DistMin=-345;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=11:104010474-104010827;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=674.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:33:0|1:21:1:0:37:1|0:0:29:26:0:0/1:37:22:0/1:21:6:.:.:.
chr11	104180380	HG2_Ill_scalpel_11937	AAAATAAAAAAACACGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCGGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAATTAAAAAAAAAAAATAAAATAAAAAAAATAAAT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1814:HG2_10X_allpass_2046:HG4_Ill_Krunchall_17495:HG3_Ill_Krunchall_16849:HG2_Ill_Krunchall_17190:HG4_PB_assemblyticsfalcon_4680:HG3_PB_assemblyticsfalcon_4802:HG2_PB_assemblyticsfalcon_4790:HG2_PB_assemblyticsPBcR_4658:HG4_PB_pbsv_12626:HG3_PB_pbsv_12322:HG4_PB_SVrefine2PBcRDovetail_6386:HG4_PB_SVrefine2Falcon1Dovetail_7720:HG4_Ill_svaba_15801:HG4_Ill_scalpel_11639:HG4_Ill_SVrefine2DISCOVARDovetail_8989:HG4_Ill_GATKHCSBGrefine_8744:HG4_10X_allpass_2393:HG3_PB_SVrefine2PBcRDovetail_5948:HG3_PB_SVrefine2Falcon1Dovetail_7679:HG3_PB_HySA_19065:HG3_Ill_svaba_15879:HG3_Ill_scalpel_12129:HG3_Ill_manta_2872:HG3_Ill_SVrefine2DISCOVARDovetail_9219:HG3_Ill_GATKHCSBGrefine_8388:HG3_10X_allpass_2494:HG2_PB_SVrefine2PBcRplusDovetail_2012:HG2_PB_SVrefine2PB10Xhap12_9097:HG2_PB_SVrefine2Falcon2Bionano_6176:HG2_PB_SVrefine2Falcon1plusDovetail_2111:HG2_Ill_svaba_15724:HG2_Ill_scalpel_11937:HG2_Ill_manta_3523:HG2_Ill_SVrefine2DISCOVARplusDovetail_2361:HG2_Ill_MetaSV_881:HG2_Ill_GATKHCSBGrefine_8490:HG2_10X_SVrefine210Xhap12_8839:HG4_Ill_MetaSV_925:HG3_Ill_MetaSV_965:HG2_PB_HySA_22969:HG2_Ill_tnscope_1416:HG2_PB_pbsv_12637;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8839:HG2_Ill_GATKHCSBGrefine_8490:HG2_Ill_MetaSV_881:HG2_Ill_SVrefine2DISCOVARplusDovetail_2361:HG2_Ill_manta_3523:HG2_Ill_scalpel_11937:HG2_Ill_svaba_15724:HG2_PB_SVrefine2Falcon1plusDovetail_2111:HG2_PB_SVrefine2Falcon2Bionano_6176:HG2_PB_SVrefine2PB10Xhap12_9097:HG2_PB_SVrefine2PBcRplusDovetail_2012:HG3_10X_allpass_2494:HG3_Ill_GATKHCSBGrefine_8388:HG3_Ill_SVrefine2DISCOVARDovetail_9219:HG3_Ill_manta_2872:HG3_Ill_scalpel_12129:HG3_Ill_svaba_15879:HG3_PB_HySA_19065:HG3_PB_SVrefine2Falcon1Dovetail_7679:HG3_PB_SVrefine2PBcRDovetail_5948:HG4_10X_allpass_2393:HG4_Ill_GATKHCSBGrefine_8744:HG4_Ill_SVrefine2DISCOVARDovetail_8989:HG4_Ill_scalpel_11639:HG4_Ill_svaba_15801:HG4_PB_SVrefine2Falcon1Dovetail_7720:HG4_PB_SVrefine2PBcRDovetail_6386;NumExactMatchSVs=27;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.08;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-343;DistBack=13685;DistForward=60386;DistMin=13685;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=11:104180381-104180737;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=675.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:2:30:0:26:1/1:0:30:0:24:1/1:0:48:./.:1:18:.:.:.
chr11	106595869	HG3_Ill_manta_2876	ACATAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGGAGGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCGA	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_886:HG4_Ill_GATKHCSBGrefine_8751:HG3_Ill_GATKHCSBGrefine_8395:HG2_Ill_GATKHCSBGrefine_8498:HG3_PB_HySA_19100:HG4_PB_HySA_18404:HG4_PB_assemblyticsfalcon_4708:HG3_PB_assemblyticsfalcon_4828:HG2_PB_assemblyticsfalcon_4812:HG2_PB_assemblyticsPBcR_4681:HG4_Ill_Krunchall_17516:HG3_Ill_Krunchall_16871:HG2_Ill_Krunchall_17213:HG4_PB_pbsv_12644:HG2_Ill_tnscope_1417:HG4_PB_SVrefine2PBcRDovetail_6396:HG4_PB_SVrefine2Falcon1Dovetail_7730:HG4_Ill_manta_2992:HG4_Ill_SVrefine2DISCOVARDovetail_9003:HG3_PB_SVrefine2PBcRDovetail_5955:HG3_PB_SVrefine2Falcon1Dovetail_7688:HG3_Ill_manta_2876:HG3_Ill_SVrefine2DISCOVARDovetail_9231:HG2_PB_SVrefine2PBcRplusDovetail_2022:HG2_PB_SVrefine2PB10Xhap12_9107:HG2_PB_SVrefine2Falcon1plusDovetail_2120:HG2_Ill_manta_3525:HG2_Ill_SVrefine2DISCOVARplusDovetail_2373:HG2_10X_SVrefine210Xhap12_8847:HG2_Ill_SpiralSDKrefine_3061:HG3_Ill_MetaSV_972:HG4_Ill_Spiral_1006:HG3_Ill_Spiral_13170:HG2_Ill_breakscan11_1815:HG2_Ill_Spiral_866:HG3_PB_pbsv_12337:HG2_PB_pbsv_12652:HG4_Ill_MetaSV_931:HG4_10X_allpass_2395:HG3_Ill_scalpel_12146:HG3_Ill_MetaSV_971:HG3_10X_allpass_2496:HG2_Ill_scalpel_11953;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8847:HG2_Ill_SVrefine2DISCOVARplusDovetail_2373:HG2_Ill_manta_3525:HG2_PB_SVrefine2Falcon1plusDovetail_2120:HG2_PB_SVrefine2PB10Xhap12_9107:HG2_PB_SVrefine2PBcRplusDovetail_2022:HG3_Ill_SVrefine2DISCOVARDovetail_9231:HG3_Ill_manta_2876:HG3_PB_SVrefine2Falcon1Dovetail_7688:HG3_PB_SVrefine2PBcRDovetail_5955:HG4_Ill_SVrefine2DISCOVARDovetail_9003:HG4_Ill_manta_2992:HG4_PB_SVrefine2Falcon1Dovetail_7730:HG4_PB_SVrefine2PBcRDovetail_6396;NumExactMatchSVs=14;ClusterMaxShiftDist=0.194946;ClusterMaxSizeDiff=0.194946;ClusterMaxEditDist=0.194946;PBcalls=16;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=14;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-297;DistBack=-48;DistForward=62146;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:106595869-106596166;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9966;PctRecOverlap=0.9933;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=676.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:47:0|1:36:2:0:44:1|0:0:38:36:0:0/1:26:30:./.:.:.:.:.:.
chr11	106786239	HG2_PB_SVrefine2PBcRplusDovetail_2024	CTATCAGCAGGAGATAAAAAAACATTTTGTAAAATGTGGCTAGAACATTGCCTAATTTTAATCCTGGGCAAGGTAAAAAGTTTATTCAAGAACATGAAGGAAACATGGTGATTATCTCGCTGTAAATTCAGTAGTCACTGAAGCATTTCTAAGTTACTTACAGAGATCATAGAAAAAGGGTGCTTCTTCGTTCAACCCAATTTTAATATAAATGAGCCACGTAAACCAAGTGAAAAAGAACTATGTCTGATTTTAAGATTTCACACTATTTGTGCATTTTAAATCTCATAACTGCTTGTTGGAAAGGCATTTGAGCATTACAAGCTGAAACCCCTTAAGCCACTTTGGATTTAAGAACAACTGAAAAACAGCCTTCTGGGACCTAACCTGAAATAGAGGAGCTTCTATATACACAACATTTTTATCTGTCATGGTTACTGCCACTCTCACTGTAAAGAAAAGAAAAAAAAAATCCATGAAGGGGAACAAGGGAAAGTAAGGGGATAAGATACATAAAGGACATGATCAAAATGCACTAACATCAGCACACTAATTTGTGACTCTGATTATAAAGACAGCTTTCTAAACACTAGTCCTACAAAGTATTCCTTTGATTAAACATAAAAAGACAAAAGATTTAGTTGACAATTTAGTCATAAGCATAAAGTACTTTTTGGTTAAATAGTAAGACTACTTTGAGAATCATAAATGACAACAGCTGTTATATCAATCCTGTCTATTAGTTGTTCAGGGAAAAATCAAAGATTTATTTAGCAAAAATCCAAAATTTTCATGGGTTGCAGATTATCAGTCTATCAGTCTATATATGTAAAACAAATGTTATAAATTACTGACTCTCTCTAATCCACATTGATAAAATCATACCTATCTCATTTGGTTGTTGAGAGTATTAAATATAAGTAAGAAATCAAAGCAGGTAGCCCTGGGCCTGGATCGTAGTACAGACTCTCAAATATCAGCAGTTATAAATATGGAAGAGATTTCAAGATATCCTTCATGTTCCTGCTTAAAGATTGTGCTTAAACCAGGTGAGCCATATTTTAACTAGAGTGAAATGCAGTTTTGAAGTACACATGAACATAGATATATATGTATTTTTTTAGATAAAGGTAGTATACCAAAATTTACATCAAAGAAGAATAAGTAGCCAATTAGCGTAGCAGGGTTCTGTCATGTTTTTATCTACTGCTAAGTAAACTGACTCGTTGGTTCAGTCCAGATATATCTTGATTACTGACATCATCACAGGAAAACCTGGGCTGAGTCTGCTCTTTCATATGAAAGACAACTTACATAAAATTTATAAACACTTGCAGAAATAAAACATTATCATGATATAAAAAATTAGAATGTACAAACTAGAAATTGCAGAATTGAATACCAATCATTCCTAAATTAATTTTTAAAACATTTAATGAGAATCTATTATGTAATTAAAATGTTGTTCTAGGAGCTAACTGGGAATACAAGATGAAAAACAAAATAAGCAATTAGGCCCATGCCTTCATGTCACTAACATCTTAGTGAGGACACAAGACAATAAAGAAACAAATCATTACAGATAGTAGTGTTATAAAGAAAATAAACAGAGCACTGAGACTGGGCTACTTCTATTTCACATAGAGCAAGAGAAATGCCCCTCTGAGGAGTTGATATTTAAGCTAAAATCTGAGCACTATGAAGCCATTTAAAAAGTTAGGGAAAGAGCATTTCAGACGAAACAAGCAGCATATTCAAAGGCCCTGTGGCAACCAGAAGGAGCTTAGCATATTAGGAAAAGATGCAAGATTGGGGCAGCTGGATGAGACTGCTTATGGTACAGAGTGACAAGACAAGGGGTTGGAGGTAAACAGCAGCCAGATAGATCAGGCAATGCTCTTAGAAATTAGCAAAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACATATGCACATGTATGTTTATTGTGACACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGTAGGGACGTGGATGAAGCTGGAAACCATCATTCTCAGTAAACTATCACAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAGCATCACACACCGGGGCCTGTTGTGGGGTGGGGGGAGGGGGGAGGGATGGCACTGGGAGATATACCTAATGTTAAATGATGAGTTAATGGGTGTAGCGCACCAACAAGGCACATGTATACATATGTAACTAACCTACACGTTGTGCACAGGTACCCTAAAACTTAAAGTATAAAAAAAAAAAAAAGAAATTAGCAAAGCCCAACAAGGAGAAGTGGGTACCATGGGCAGACAATAATGTGATTCCTCTTCAAATTTAAATTCTCATAAAATAATTTAAACATTCTTTAAGCATTTAGTAGGAACTACTGCTCTGGGTAGAACAGAGAAGGAGAACGAAGGGTATAACGCCCCTGTTTGCATGCCCAGCTCTGCAAAACATGCCTGCAGTTCACTAGTTCTCCTTGGGGGGCACTGTAAGGACTATCTGTTATGATGGAGCACACCACAGATTTACTTGCAACCACCTGTGTTCTCTCCTTGAAAAAAAATTGTGGTAAATGCAATTTTCTCTATTTATTACATTTGCAGTGACACTGCAGAGCCCCACATTGAATGCAGCACTTGGCAACTGTCCAATTTGCCTTCCCTTTAATTCTGCTCTTTGAAAGCAAATATTTTACCCAACACACCATTTTTTAAAAAATCCTACTCTTAAACAATGCATAATTCTACATATTTACTTGTAAGGAGACAACAGAACTCAAATTTGTTTGCATATTCTTCCTCGCCATGGACATCAGACATACATAAACACACACAAATTCTCTCTTCCACACGTGCACACACATCACACATAGACATTACACACACAGAGACATTACACATGTCACATTAATTTCAAATTCACAAAAAAAGAAAGGAAATTTTCAAAATTTATTGGTGACAAGACCTGTGAATCTATTAGATCACTTACCCAGGCAAACAACTAAAGACAGAAAAGATTTATTGTGCACACTTCATCTCATGACAAGTAAAAAAGGTTAACAGCTTTTTATCTTTCTTTCCAGTCAATGAATTACAAGGTAGTTACCCACTCAAGTGTACAATGTACCTAGCATTTCAAATAATCAATATTA	TT	20	PASS	ClusterIDs=HG2_10X_allpass_2048:HG2_Ill_tnscope_1418:HG4_PB_SVrefine2PBcRDovetail_6398:HG4_PB_SVrefine2Falcon1Dovetail_7732:HG3_PB_SVrefine2PBcRDovetail_5957:HG3_PB_SVrefine2Falcon1Dovetail_7690:HG3_Ill_SVrefine2DISCOVARDovetail_9233:HG2_PB_SVrefine2PBcRplusDovetail_2024:HG2_PB_SVrefine2Falcon2Bionano_6189:HG2_PB_SVrefine2Falcon1plusDovetail_2122:HG2_10X_SVrefine210Xhap12_8849:HG4_PB_pbsv_12646:HG2_PB_pbsv_12654:HG4_10X_allpass_2396:HG2_Ill_MetaSV_887:HG3_PB_pbsv_12339:HG4_Ill_MetaSV_933:HG3_Ill_MetaSV_973:HG4_PB_assemblyticsfalcon_4710:HG3_PB_assemblyticsfalcon_4830:HG2_PB_assemblyticsfalcon_4814:HG2_PB_assemblyticsPBcR_4683:HG3_10X_allpass_2497:HG4_Ill_Krunchall_17517:HG3_Ill_Krunchall_16872:HG2_Ill_Krunchall_17214;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8849:HG2_PB_SVrefine2Falcon1plusDovetail_2122:HG2_PB_SVrefine2Falcon2Bionano_6189:HG2_PB_SVrefine2PBcRplusDovetail_2024:HG3_Ill_SVrefine2DISCOVARDovetail_9233:HG3_PB_SVrefine2Falcon1Dovetail_7690:HG3_PB_SVrefine2PBcRDovetail_5957:HG4_PB_SVrefine2Falcon1Dovetail_7732:HG4_PB_SVrefine2PBcRDovetail_6398;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00210053;ClusterMaxSizeDiff=0.00210053;ClusterMaxEditDist=0.00210053;PBcalls=14;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3332;DistBack=-24;DistForward=1315;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:106786239-106789572;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9997;PctRecOverlap=0.9991;SizeDiff=1;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=99;MatchId=677.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:73:./.:31:11:2:23:0|1:61:0:0:35:0/1:66:31:0/1:276:110:3380:.:.
chr11	108835056	HG4_Ill_SVrefine2DISCOVARDovetail_9012	TTATATTTATATTTTATATAAATATAAAAATATATATTTATATTTTATATAAATATAAAAATATATATTTATATTTTATATAAATATAAAAATATATATTTATATTTTATATAAATATAAAAATA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8861:HG4_PB_HySA_18417:HG3_PB_HySA_19111:HG2_PB_HySA_23015:HG4_Ill_Krunchall_17530:HG3_Ill_Krunchall_16883:HG2_Ill_Krunchall_17226:HG2_PB_pbsv_12660:HG4_PB_SVrefine2Falcon1Dovetail_7735:HG3_Ill_manta_2879:HG3_Ill_SVrefine2DISCOVARDovetail_9241:HG2_PB_SVrefine2PBcRplusDovetail_2027:HG2_PB_SVrefine2PB10Xhap12_9111:HG2_PB_SVrefine2Falcon2Bionano_6192:HG2_Ill_manta_3528:HG2_Ill_SVrefine2DISCOVARplusDovetail_2380:HG2_10X_SVrefine210Xhap12_8862:HG2_PB_SVrefine2Falcon1plusDovetail_2125:HG4_PB_pbsv_12652:HG3_PB_pbsv_12345:HG4_PB_assemblyticsfalcon_4725:HG4_PB_SVrefine2PBcRDovetail_6401:HG4_Ill_svaba_15826:HG4_Ill_manta_2994:HG4_Ill_SVrefine2DISCOVARDovetail_9012:HG4_Ill_MetaSV_936:HG4_Ill_GATKHC_20281:HG4_Ill_GATKHCSBGrefine_8754:HG4_10X_allpass_2397:HG3_PB_assemblyticsfalcon_4845:HG3_PB_SVrefine2PBcRDovetail_5962:HG3_PB_SVrefine2Falcon1Dovetail_7694:HG3_Ill_svaba_15903:HG3_Ill_MetaSV_975:HG3_Ill_GATKHC_20138:HG3_Ill_GATKHCSBGrefine_8398:HG3_10X_allpass_2498:HG2_PB_assemblyticsfalcon_4829:HG2_PB_assemblyticsPBcR_4698:HG2_Ill_svaba_15749:HG2_Ill_SpiralSDKrefine_3070:HG2_Ill_MetaSV_890:HG2_Ill_GATKHC_20274:HG2_Ill_GATKHCSBGrefine_8501;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8861:HG4_PB_assemblyticsfalcon_4725:HG4_PB_SVrefine2PBcRDovetail_6401:HG4_Ill_svaba_15826:HG4_Ill_manta_2994:HG4_Ill_SVrefine2DISCOVARDovetail_9012:HG4_Ill_MetaSV_936:HG4_Ill_GATKHC_20281:HG4_Ill_GATKHCSBGrefine_8754:HG4_10X_allpass_2397:HG3_PB_assemblyticsfalcon_4845:HG3_PB_SVrefine2PBcRDovetail_5962:HG3_PB_SVrefine2Falcon1Dovetail_7694:HG3_Ill_svaba_15903:HG3_Ill_MetaSV_975:HG3_Ill_GATKHC_20138:HG3_Ill_GATKHCSBGrefine_8398:HG3_10X_allpass_2498:HG2_PB_assemblyticsfalcon_4829:HG2_PB_assemblyticsPBcR_4698:HG2_Ill_svaba_15749:HG2_Ill_SpiralSDKrefine_3070:HG2_Ill_MetaSV_890:HG2_Ill_GATKHC_20274:HG2_Ill_GATKHCSBGrefine_8501;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0401606;ClusterMaxSizeDiff=0.0401606;ClusterMaxEditDist=0.0401606;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-124;DistBack=-32;DistForward=43998;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=47;REFWIDENED=11:108835057-108835227;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=678.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:55:1/1:1:26:0:27:1/1:0:13:0:15:1/1:0:47:./.:.:.:.:.:.
chr11	109930919	HG4_Ill_GATKHCSBGrefine_8757	TGAACAGTTTCTCTTAGTTTTCAGTTTCTATCATGATTCATCCAACAAGTCATTATTGAAAAATTATTGTGAGCCA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_12665:HG2_PB_assemblyticsfalcon_4839:HG4_PB_assemblyticsfalcon_4736:HG3_PB_assemblyticsfalcon_4856:HG2_PB_assemblyticsPBcR_4709:HG4_PB_HySA_18426:HG3_PB_HySA_19121:HG2_PB_HySA_23029:HG4_PB_pbsv_12657:HG4_PB_SVrefine2PBcRDovetail_6405:HG4_PB_SVrefine2Falcon1Dovetail_7738:HG4_Ill_svaba_15833:HG4_Ill_scalpel_11669:HG4_Ill_manta_2996:HG4_Ill_SVrefine2DISCOVARDovetail_9018:HG4_Ill_Krunchall_17540:HG4_Ill_GATKHC_20296:HG4_Ill_GATKHCSBGrefine_8757:HG4_Ill_Cortex_666:HG4_Ill_250bpfermikitraw_16750:HG4_Ill_150bpfermikitraw_16100:HG4_CG_vcfBeta_8058:HG4_10X_allpass_2398:HG3_PB_pbsv_12350:HG3_PB_SVrefine2PBcRDovetail_5965:HG3_PB_SVrefine2Falcon1Dovetail_7697:HG3_Ill_svaba_15911:HG3_Ill_scalpel_12161:HG3_Ill_manta_2880:HG3_Ill_SVrefine2DISCOVARDovetail_9249:HG3_Ill_Krunchall_16895:HG3_Ill_GATKHC_20151:HG3_Ill_GATKHCSBGrefine_8401:HG3_Ill_Cortex_701:HG3_Ill_250bpfermikitraw_16425:HG3_Ill_150bpfermikitraw_15966:HG3_CG_vcfBeta_6852:HG3_10X_allpass_2499:HG2_PB_SVrefine2PBcRplusDovetail_2031:HG2_PB_SVrefine2PB10Xhap12_9116:HG2_PB_SVrefine2Falcon2Bionano_6195:HG2_PB_SVrefine2Falcon1plusDovetail_2129:HG2_Ill_svaba_15757:HG2_Ill_scalpel_11965:HG2_Ill_manta_3529:HG2_Ill_SpiralSDKrefine_3075:HG2_Ill_SVrefine2DISCOVARplusDovetail_2386:HG2_Ill_Krunchall_17235:HG2_Ill_GATKHC_20290:HG2_Ill_GATKHCSBGrefine_8504:HG2_Ill_Cortex_1598:HG2_Ill_250bpfermikitraw_16884:HG2_Ill_150bpfermikitraw_15921:HG2_CG_vcfBeta_7199:HG2_10X_allpass_2050:HG2_10X_SVrefine210Xhap12_8863:HG2_Ill_breakscan11_1816;NumClusterSVs=57;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8863:HG2_10X_allpass_2050:HG2_CG_vcfBeta_7199:HG2_Ill_150bpfermikitraw_15921:HG2_Ill_250bpfermikitraw_16884:HG2_Ill_Cortex_1598:HG2_Ill_GATKHCSBGrefine_8504:HG2_Ill_GATKHC_20290:HG2_Ill_Krunchall_17235:HG2_Ill_SVrefine2DISCOVARplusDovetail_2386:HG2_Ill_SpiralSDKrefine_3075:HG2_Ill_manta_3529:HG2_Ill_scalpel_11965:HG2_Ill_svaba_15757:HG2_PB_SVrefine2Falcon1plusDovetail_2129:HG2_PB_SVrefine2Falcon2Bionano_6195:HG2_PB_SVrefine2PB10Xhap12_9116:HG2_PB_SVrefine2PBcRplusDovetail_2031:HG3_10X_allpass_2499:HG3_CG_vcfBeta_6852:HG3_Ill_150bpfermikitraw_15966:HG3_Ill_250bpfermikitraw_16425:HG3_Ill_Cortex_701:HG3_Ill_GATKHCSBGrefine_8401:HG3_Ill_GATKHC_20151:HG3_Ill_Krunchall_16895:HG3_Ill_SVrefine2DISCOVARDovetail_9249:HG3_Ill_manta_2880:HG3_Ill_scalpel_12161:HG3_Ill_svaba_15911:HG3_PB_SVrefine2Falcon1Dovetail_7697:HG3_PB_SVrefine2PBcRDovetail_5965:HG3_PB_pbsv_12350:HG4_10X_allpass_2398:HG4_CG_vcfBeta_8058:HG4_Ill_150bpfermikitraw_16100:HG4_Ill_250bpfermikitraw_16750:HG4_Ill_Cortex_666:HG4_Ill_GATKHCSBGrefine_8757:HG4_Ill_GATKHC_20296:HG4_Ill_Krunchall_17540:HG4_Ill_SVrefine2DISCOVARDovetail_9018:HG4_Ill_manta_2996:HG4_Ill_scalpel_11669:HG4_Ill_svaba_15833:HG4_PB_SVrefine2Falcon1Dovetail_7738:HG4_PB_SVrefine2PBcRDovetail_6405:HG4_PB_pbsv_12657;NumExactMatchSVs=48;ClusterMaxShiftDist=0.163265;ClusterMaxSizeDiff=0.163265;ClusterMaxEditDist=0.163265;PBcalls=18;Illcalls=32;TenXcalls=4;CGcalls=3;PBexactcalls=10;Illexactcalls=31;TenXexactcalls=4;CGexactcalls=3;HG2count=23;HG3count=17;HG4count=17;NumTechs=4;NumTechsExact=4;SVLEN=-75;DistBack=16014;DistForward=19261;DistMin=16014;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=11:109930920-109931000;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:60:1/1:2:28:0:27:1/1:0:34:0:18:1/1:0:47:./.:.:.:.:.:.
chr11	109976699	HG2_PB_SVrefine2Falcon2Bionano_6196	GAAAAGTTATACCAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGACTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCAGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAATAAATAAATAAATAAATAAATAAAT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_12666:HG2_PB_HySA_23030:HG4_PB_assemblyticsfalcon_4737:HG3_PB_assemblyticsfalcon_4857:HG2_PB_assemblyticsfalcon_4840:HG2_PB_assemblyticsPBcR_4710:HG4_Ill_Krunchall_17541:HG2_Ill_Krunchall_17236:HG4_PB_HySA_18427:HG4_Ill_MetaSV_937:HG3_Ill_MetaSV_976:HG2_Ill_tnscope_1419:HG2_Ill_MetaSV_891:HG4_PB_pbsv_12658:HG4_PB_SVrefine2PBcRDovetail_6406:HG4_PB_SVrefine2Falcon1Dovetail_7739:HG4_Ill_svaba_15834:HG4_Ill_scalpel_11670:HG4_Ill_manta_2997:HG4_Ill_SVrefine2DISCOVARDovetail_9019:HG4_Ill_GATKHCSBGrefine_8758:HG4_10X_allpass_2399:HG3_PB_pbsv_12351:HG3_PB_SVrefine2PBcRDovetail_5966:HG3_PB_SVrefine2Falcon1Dovetail_7698:HG3_Ill_svaba_15912:HG3_Ill_manta_2881:HG3_Ill_GATKHCSBGrefine_8402:HG3_10X_allpass_2500:HG2_PB_SVrefine2PBcRplusDovetail_2032:HG2_PB_SVrefine2PB10Xhap12_9117:HG2_PB_SVrefine2Falcon2Bionano_6196:HG2_PB_SVrefine2Falcon1plusDovetail_2130:HG2_Ill_svaba_15758:HG2_Ill_manta_3530:HG2_Ill_SVrefine2DISCOVARplusDovetail_2387:HG2_Ill_GATKHCSBGrefine_8505:HG2_10X_allpass_2051:HG2_10X_SVrefine210Xhap12_8864:HG2_Ill_breakscan11_1817;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8864:HG2_10X_allpass_2051:HG2_Ill_GATKHCSBGrefine_8505:HG2_Ill_SVrefine2DISCOVARplusDovetail_2387:HG2_Ill_manta_3530:HG2_Ill_svaba_15758:HG2_PB_SVrefine2Falcon1plusDovetail_2130:HG2_PB_SVrefine2Falcon2Bionano_6196:HG2_PB_SVrefine2PB10Xhap12_9117:HG2_PB_SVrefine2PBcRplusDovetail_2032:HG3_10X_allpass_2500:HG3_Ill_GATKHCSBGrefine_8402:HG3_Ill_manta_2881:HG3_Ill_svaba_15912:HG3_PB_SVrefine2Falcon1Dovetail_7698:HG3_PB_SVrefine2PBcRDovetail_5966:HG3_PB_pbsv_12351:HG4_10X_allpass_2399:HG4_Ill_GATKHCSBGrefine_8758:HG4_Ill_SVrefine2DISCOVARDovetail_9019:HG4_Ill_manta_2997:HG4_Ill_scalpel_11670:HG4_Ill_svaba_15834:HG4_PB_SVrefine2Falcon1Dovetail_7739:HG4_PB_SVrefine2PBcRDovetail_6406:HG4_PB_pbsv_12658;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0778816;ClusterMaxSizeDiff=0.0778816;ClusterMaxEditDist=0.0778816;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=26442;DistForward=-314;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=11:109976700-109977038;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=680.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:62:./.:8:24:0:28:1/1:0:30:0:26:1/1:0:32:./.:1:18:.:.:.
chr11	110026838	HG4_Ill_150bpfermikitraw_16103	CATTATATTTTTATATATTTTATATATATAAATATATATTTATATTTTTAGGTA	C	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_4860:HG4_Ill_GATKHC_20299:HG4_Ill_GATKHCSBGrefine_8759:HG4_CG_vcfBeta_8060:HG3_Ill_GATKHC_20155:HG3_Ill_GATKHCSBGrefine_8404:HG3_CG_vcfBeta_6854:HG2_Ill_GATKHC_20294:HG2_Ill_GATKHCSBGrefine_8507:HG2_CG_vcfBeta_7202:HG2_PB_HySA_23032:HG2_Ill_SpiralSDKrefine_3078:HG4_Ill_manta_2998:HG3_Ill_manta_2882:HG2_Ill_manta_3531:HG4_Ill_Spiral_1007:HG3_Ill_Spiral_13190:HG2_Ill_Spiral_867:HG4_PB_HySA_18430:HG3_PB_HySA_19123:HG4_PB_pbsv_12659:HG4_Ill_svaba_15836:HG4_Ill_scalpel_11672:HG4_Ill_Krunchall_17544:HG4_Ill_250bpfermikitraw_16753:HG4_Ill_150bpfermikitraw_16103:HG3_PB_pbsv_12352:HG3_Ill_svaba_15914:HG3_Ill_scalpel_12163:HG3_Ill_Krunchall_16898:HG3_Ill_250bpfermikitraw_16428:HG3_Ill_150bpfermikitraw_15969:HG2_PB_pbsv_12667:HG2_Ill_svaba_15760:HG2_Ill_scalpel_11967:HG2_Ill_Krunchall_17239:HG2_Ill_250bpfermikitraw_16887:HG2_Ill_150bpfermikitraw_15924:HG2_PB_assemblyticsPBcR_4713:HG2_PB_assemblyticsfalcon_4843:HG4_PB_assemblyticsfalcon_4740;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15924:HG2_Ill_250bpfermikitraw_16887:HG2_Ill_Krunchall_17239:HG2_Ill_scalpel_11967:HG2_Ill_svaba_15760:HG2_PB_pbsv_12667:HG3_Ill_150bpfermikitraw_15969:HG3_Ill_250bpfermikitraw_16428:HG3_Ill_Krunchall_16898:HG3_Ill_scalpel_12163:HG3_Ill_svaba_15914:HG3_PB_pbsv_12352:HG4_Ill_150bpfermikitraw_16103:HG4_Ill_250bpfermikitraw_16753:HG4_Ill_Krunchall_17544:HG4_Ill_scalpel_11672:HG4_Ill_svaba_15836:HG4_PB_pbsv_12659;NumExactMatchSVs=18;ClusterMaxShiftDist=0.178218;ClusterMaxSizeDiff=0.178218;ClusterMaxEditDist=0.19802;PBcalls=10;Illcalls=28;TenXcalls=0;CGcalls=3;PBexactcalls=3;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-53;DistBack=4186;DistForward=45736;DistMin=4186;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=11:110026837-110026892;PctSeqSimilarity=0.9815;PctSizeSimilarity=1;PctRecOverlap=0.9444;SizeDiff=0;StartDistance=-3;EndDistance=-3;GTMatch=0;TruScore=97;MatchId=681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:69:1/1:3:13:1:30:1/1:0:13:0:16:1/1:0:70:./.:.:.:.:.:.
chr11	112617744	HG2_PB_SVrefine2PBcRplusDovetail_2039	GGAGAGAGGATGGCTGATGTAGAAATCTTGTTCAGAGAAGAGTTGGGGACAGCAAGTGCCATGTCCCTTCCCCATGGGGGATCTGAACCAGAGACTGTGGCTTAAGCTCCTCAGGGAGCGACTTAGAAAGAAAACAAAGAAAAATACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCACGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCATGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCCAGATGGCGCCACTGGACTCCAGCCTGGGCGACAGAGC	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6411:HG4_Ill_GATKHCSBGrefine_8762:HG3_Ill_GATKHCSBGrefine_8410:HG2_Ill_GATKHCSBGrefine_8511:HG4_PB_assemblyticsfalcon_4758:HG2_PB_assemblyticsfalcon_4859:HG2_PB_assemblyticsPBcR_4731:HG2_PB_HySA_23054:HG2_10X_allpass_2053:HG2_Ill_tnscope_1420:HG4_PB_SVrefine2Falcon1Dovetail_7744:HG4_Ill_manta_2999:HG4_Ill_SVrefine2DISCOVARDovetail_9030:HG3_PB_SVrefine2PBcRDovetail_5971:HG3_PB_SVrefine2Falcon1Dovetail_7703:HG3_Ill_manta_2885:HG3_Ill_SVrefine2DISCOVARDovetail_9258:HG2_PB_SVrefine2PBcRplusDovetail_2039:HG2_PB_SVrefine2PB10Xhap12_9122:HG2_PB_SVrefine2Falcon2Bionano_6200:HG2_PB_SVrefine2Falcon1plusDovetail_2134:HG2_PB_PB10Xdip_4935:HG2_Ill_manta_3532:HG2_Ill_SVrefine2DISCOVARplusDovetail_2393:HG2_10X_SVrefine210Xhap12_8872:HG3_PB_assemblyticsfalcon_4877:HG4_Ill_MetaSV_940:HG4_Ill_Spiral_1008:HG3_Ill_Spiral_13211:HG2_Ill_Spiral_868:HG2_Ill_MetaSV_894:HG4_PB_pbsv_12664:HG4_10X_allpass_2400:HG3_PB_HySA_19142:HG3_Ill_scalpel_12183:HG3_10X_allpass_2501:HG2_PB_pbsv_12673:HG3_PB_pbsv_12359;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8872:HG2_Ill_SVrefine2DISCOVARplusDovetail_2393:HG2_Ill_manta_3532:HG2_PB_PB10Xdip_4935:HG2_PB_SVrefine2Falcon1plusDovetail_2134:HG2_PB_SVrefine2Falcon2Bionano_6200:HG2_PB_SVrefine2PB10Xhap12_9122:HG2_PB_SVrefine2PBcRplusDovetail_2039:HG3_Ill_SVrefine2DISCOVARDovetail_9258:HG3_Ill_manta_2885:HG3_PB_SVrefine2Falcon1Dovetail_7703:HG3_PB_SVrefine2PBcRDovetail_5971:HG4_Ill_SVrefine2DISCOVARDovetail_9030:HG4_Ill_manta_2999:HG4_PB_SVrefine2Falcon1Dovetail_7744;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0668258;ClusterMaxSizeDiff=0.0668258;ClusterMaxEditDist=0.0823245;PBcalls=18;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-404;DistBack=-573;DistForward=-402;DistMin=-573;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:112617744-112618148;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9975;PctRecOverlap=0.9975;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=682.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:32:1|0:0:35:23:1:1|0:0:15:46:0:0/1:63:28:0/1:34:9:.:.:.
chr11	114397160	HG4_Ill_GATKHCSBGrefine_8764	TTAAATTGCCTTTCTGCAGATCATGCTTTTGTTAAATTGTGAATTTGCATTTTAAACCACAAAGTGGATCA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_12665:HG2_PB_HySA_23062:HG2_PB_pbsv_12674:HG4_PB_assemblyticsfalcon_4765:HG4_PB_SVrefine2PBcRDovetail_6412:HG4_PB_HySA_18451:HG4_Ill_svaba_15865:HG4_Ill_scalpel_11697:HG4_Ill_manta_3000:HG4_Ill_SVrefine2DISCOVARDovetail_9033:HG4_Ill_Krunchall_17583:HG4_Ill_GATKHC_20337:HG4_Ill_GATKHCSBGrefine_8764:HG4_Ill_Cortex_676:HG4_Ill_250bpfermikitraw_16789:HG4_Ill_150bpfermikitraw_16141:HG4_CG_vcfBeta_8087:HG4_10X_allpass_2401:HG2_Ill_svaba_15790:HG2_Ill_manta_3533:HG2_Ill_breakscan11_1818:HG2_Ill_SpiralSDKrefine_3102:HG2_Ill_Krunchall_17277:HG2_Ill_GATKHC_20336:HG2_Ill_GATKHCSBGrefine_8513:HG2_Ill_Cortex_1621:HG2_Ill_250bpfermikitraw_16926:HG2_Ill_150bpfermikitraw_15958:HG2_CG_vcfBeta_7230:HG2_10X_allpass_2054:HG2_10X_SVrefine210Xhap12_8874;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8874:HG2_10X_allpass_2054:HG2_CG_vcfBeta_7230:HG2_Ill_150bpfermikitraw_15958:HG2_Ill_250bpfermikitraw_16926:HG2_Ill_Cortex_1621:HG2_Ill_GATKHCSBGrefine_8513:HG2_Ill_GATKHC_20336:HG2_Ill_Krunchall_17277:HG2_Ill_SpiralSDKrefine_3102:HG2_Ill_breakscan11_1818:HG2_Ill_manta_3533:HG2_Ill_svaba_15790:HG4_10X_allpass_2401:HG4_CG_vcfBeta_8087:HG4_Ill_150bpfermikitraw_16141:HG4_Ill_250bpfermikitraw_16789:HG4_Ill_Cortex_676:HG4_Ill_GATKHCSBGrefine_8764:HG4_Ill_GATKHC_20337:HG4_Ill_Krunchall_17583:HG4_Ill_SVrefine2DISCOVARDovetail_9033:HG4_Ill_manta_3000:HG4_Ill_scalpel_11697:HG4_Ill_svaba_15865:HG4_PB_HySA_18451:HG4_PB_SVrefine2PBcRDovetail_6412;NumExactMatchSVs=27;ClusterMaxShiftDist=0.151515;ClusterMaxSizeDiff=0.151515;ClusterMaxEditDist=0.183206;PBcalls=6;Illcalls=20;TenXcalls=3;CGcalls=2;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=2;HG2count=15;HG3count=0;HG4count=16;NumTechs=4;NumTechsExact=4;SVLEN=-70;DistBack=-71;DistForward=-60;DistMin=-71;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=11:114397161-114397232;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=683.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:0|1:27:2:0:20:0|1:48:0:0:11:0/1:32:14:./.:.:.:.:.:.
chr11	115665944	HG3_Ill_150bpfermikitraw_16016	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_12369:HG4_Ill_manta_3002:HG3_Ill_manta_2887:HG2_Ill_manta_3535:HG4_PB_pbsv_12672:HG4_Ill_svaba_15874:HG4_Ill_scalpel_11706:HG4_Ill_Krunchall_17593:HG4_Ill_GATKHC_20349:HG4_Ill_GATKHCSBGrefine_8769:HG4_Ill_250bpfermikitraw_16798:HG4_Ill_150bpfermikitraw_16150:HG4_10X_allpass_2402:HG3_PB_assemblyticsfalcon_4899:HG3_Ill_svaba_15959:HG3_Ill_scalpel_12206:HG3_Ill_Krunchall_16946:HG3_Ill_GATKHC_20217:HG3_Ill_GATKHCSBGrefine_8419:HG3_Ill_250bpfermikitraw_16476:HG3_Ill_150bpfermikitraw_16016:HG2_PB_pbsv_12681:HG2_PB_assemblyticsfalcon_4884:HG2_PB_assemblyticsPBcR_4754:HG2_Ill_svaba_15802:HG2_Ill_scalpel_12006:HG2_Ill_breakscan11_1820:HG2_Ill_SpiralSDKrefine_3112:HG2_Ill_Krunchall_17289:HG2_Ill_GATKHC_20352:HG2_Ill_GATKHCSBGrefine_8516:HG2_Ill_250bpfermikitraw_16936:HG2_Ill_150bpfermikitraw_15969:HG2_PB_HySA_23071;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_15969:HG2_Ill_250bpfermikitraw_16936:HG2_Ill_GATKHCSBGrefine_8516:HG2_Ill_GATKHC_20352:HG2_Ill_Krunchall_17289:HG2_Ill_SpiralSDKrefine_3112:HG2_Ill_breakscan11_1820:HG2_Ill_scalpel_12006:HG2_Ill_svaba_15802:HG2_PB_assemblyticsPBcR_4754:HG2_PB_assemblyticsfalcon_4884:HG2_PB_pbsv_12681:HG3_Ill_150bpfermikitraw_16016:HG3_Ill_250bpfermikitraw_16476:HG3_Ill_GATKHCSBGrefine_8419:HG3_Ill_GATKHC_20217:HG3_Ill_Krunchall_16946:HG3_Ill_scalpel_12206:HG3_Ill_svaba_15959:HG3_PB_assemblyticsfalcon_4899:HG4_10X_allpass_2402:HG4_Ill_150bpfermikitraw_16150:HG4_Ill_250bpfermikitraw_16798:HG4_Ill_GATKHCSBGrefine_8769:HG4_Ill_GATKHC_20349:HG4_Ill_Krunchall_17593:HG4_Ill_scalpel_11706:HG4_Ill_svaba_15874;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.153846;PBcalls=7;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=9;DistForward=31118;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=103;REFWIDENED=11:115665844-115665997;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9808;PctRecOverlap=0.8113;SizeDiff=-1;StartDistance=10;EndDistance=9;GTMatch=0;TruScore=92;MatchId=684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:54:1/1:3:24:3:22:./.:1:16:0:11:1/1:0:38:./.:.:.:.:.:.
chr11	117191092	HG2_PB_SVrefine2PBcRplusDovetail_2053	AGCAATTCTCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACCATGTCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGCCTGGCTAATTTTTGTGTTTTTAGTAGAGATGGGGTTTCACCACGTTGG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2413:HG2_PB_pbsv_12690:HG3_PB_pbsv_12380:HG4_PB_pbsv_12682:HG3_Ill_MetaSV_980:HG4_PB_SVrefine2PBcRDovetail_6423:HG4_PB_SVrefine2Falcon1Dovetail_7757:HG4_PB_HySA_18477:HG4_Ill_SVrefine2DISCOVARDovetail_9047:HG4_Ill_150bpfermikitraw_16168:HG4_10X_allpass_2403:HG3_PB_SVrefine2Falcon1Dovetail_7717:HG3_Ill_SVrefine2DISCOVARDovetail_9276:HG3_10X_allpass_2502:HG2_PB_SVrefine2PBcRplusDovetail_2053:HG2_PB_SVrefine2PB10Xhap12_9138:HG2_PB_SVrefine2Falcon2Bionano_6214:HG2_PB_SVrefine2Falcon1plusDovetail_2146;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2413:HG4_PB_SVrefine2PBcRDovetail_6423:HG4_PB_SVrefine2Falcon1Dovetail_7757:HG4_PB_HySA_18477:HG4_Ill_SVrefine2DISCOVARDovetail_9047:HG4_Ill_150bpfermikitraw_16168:HG4_10X_allpass_2403:HG3_PB_SVrefine2Falcon1Dovetail_7717:HG3_Ill_SVrefine2DISCOVARDovetail_9276:HG3_10X_allpass_2502:HG2_PB_SVrefine2PBcRplusDovetail_2053:HG2_PB_SVrefine2PB10Xhap12_9138:HG2_PB_SVrefine2Falcon2Bionano_6214:HG2_PB_SVrefine2Falcon1plusDovetail_2146;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0189274;ClusterMaxSizeDiff=0.0189274;ClusterMaxEditDist=0.0254777;PBcalls=11;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-158;DistBack=59423;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=158;REFWIDENED=11:117191093-117191408;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=685.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:1:27:1:19:./.:0:1:0:3:1/1:0:14:./.:.:.:.:.:.
chr11	117967665	HG2_Ill_SVrefine2DISCOVARplusDovetail_2417	GGAAGGAAAGAAAGAAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_12692:HG2_Ill_scalpel_12025:HG3_PB_SVrefine2Falcon1Dovetail_7719:HG3_PB_assemblyticsfalcon_4924:HG2_PB_assemblyticsfalcon_4902:HG2_PB_SVrefine2Falcon2Bionano_6217:HG2_PB_SVrefine2PB10Xhap12_9140:HG4_PB_SVrefine2PBcRDovetail_6425:HG4_Ill_SVrefine2DISCOVARDovetail_9050:HG2_Ill_SVrefine2DISCOVARplusDovetail_2417:HG2_10X_SVrefine210Xhap12_8885:HG2_PB_SVrefine2Falcon1plusDovetail_2148:HG2_Ill_scalpel_12024:HG2_Ill_SpiralSDKrefine_3124:HG4_PB_pbsv_12684;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8885:HG2_Ill_SVrefine2DISCOVARplusDovetail_2417:HG4_Ill_SVrefine2DISCOVARDovetail_9050;NumExactMatchSVs=3;ClusterMaxShiftDist=0.35122;ClusterMaxSizeDiff=0.35122;ClusterMaxEditDist=0.370732;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-91;DistBack=13;DistForward=-70;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=193;REFWIDENED=11:117967498-117967781;PctSeqSimilarity=0.9375;PctSizeSimilarity=0.901;PctRecOverlap=0.1765;SizeDiff=-10;StartDistance=84;EndDistance=74;GTMatch=0;TruScore=67;MatchId=686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:25:0|1:28:2:5:23:./.:18:9:13:2:0/1:41:11:./.:.:.:.:.:.
chr11	119719513	HG2_Ill_GATKHCSBGrefine_8527	GAGAAAGGATCTCAGCTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8891:HG4_PB_pbsv_12697:HG2_PB_pbsv_12705:HG2_PB_HySA_23124:HG2_Ill_breakscan11_1821:HG4_Ill_Krunchall_17633:HG4_PB_assemblyticsfalcon_4815:HG4_PB_HySA_18500:HG4_Ill_scalpel_11734:HG4_Ill_GATKHCSBGrefine_8777:HG4_10X_allpass_2404:HG3_PB_assemblyticsfalcon_4944:HG2_Ill_scalpel_12033:HG2_Ill_manta_3541:HG2_Ill_GATKHCSBGrefine_8527:HG4_PB_SVrefine2PBcRDovetail_6432:HG4_Ill_SVrefine2DISCOVARDovetail_9056:HG2_PB_SVrefine2PBcRplusDovetail_2062:HG2_PB_SVrefine2PB10Xhap12_9152:HG2_PB_SVrefine2Falcon1plusDovetail_2158;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8527:HG2_Ill_manta_3541:HG2_Ill_scalpel_12033:HG3_PB_assemblyticsfalcon_4944:HG4_10X_allpass_2404:HG4_Ill_GATKHCSBGrefine_8777:HG4_Ill_scalpel_11734:HG4_PB_HySA_18500:HG4_PB_assemblyticsfalcon_4815;NumExactMatchSVs=9;ClusterMaxShiftDist=0.175943;ClusterMaxSizeDiff=0.175943;ClusterMaxEditDist=0.287253;PBcalls=10;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-288;DistBack=25597;DistForward=-289;DistMin=-289;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=302;REFWIDENED=11:119719227-119719816;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=687.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:23:0|1:26:4:2:18:1|0:0:13:20:0:0/1:10:14:./.:.:.:.:.:.
chr11	121636424	HG3_Ill_GATKHC_20279	CCTCTCTCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_12716:HG4_CG_vcfBeta_8114:HG2_PB_PB10Xdip_5089:HG4_Ill_scalpel_11742:HG4_Ill_Krunchall_17645:HG4_Ill_GATKHC_20410:HG4_Ill_GATKHCSBGrefine_8779:HG4_Ill_250bpfermikitraw_16846:HG3_Ill_scalpel_12243:HG3_Ill_Krunchall_16991:HG3_Ill_GATKHC_20279:HG3_Ill_GATKHCSBGrefine_8430:HG3_Ill_250bpfermikitraw_16518:HG2_Ill_scalpel_12043:HG2_Ill_Krunchall_17331:HG2_Ill_GATKHC_20407:HG2_Ill_GATKHCSBGrefine_8530:HG2_Ill_250bpfermikitraw_16981:HG2_Ill_150bpfermikitraw_16006:HG4_PB_HySA_18521:HG2_PB_HySA_23149:HG3_Ill_manta_2892:HG2_Ill_manta_3544;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16006:HG2_Ill_250bpfermikitraw_16981:HG2_Ill_GATKHCSBGrefine_8530:HG2_Ill_GATKHC_20407:HG2_Ill_Krunchall_17331:HG2_Ill_scalpel_12043:HG3_Ill_250bpfermikitraw_16518:HG3_Ill_GATKHCSBGrefine_8430:HG3_Ill_GATKHC_20279:HG3_Ill_Krunchall_16991:HG3_Ill_scalpel_12243:HG4_Ill_250bpfermikitraw_16846:HG4_Ill_GATKHCSBGrefine_8779:HG4_Ill_GATKHC_20410:HG4_Ill_Krunchall_17645:HG4_Ill_scalpel_11742;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0380952;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0571429;PBcalls=4;Illcalls=18;TenXcalls=0;CGcalls=1;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-52;DistBack=23;DistForward=-40;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:121636423-121636478;PctSeqSimilarity=0.9907;PctSizeSimilarity=0.9811;PctRecOverlap=0.9815;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=688.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:./.:6:53:0:0:1/1:0:9:0:17:1/1:0:29:./.:.:.:.:.:.
chr11	122347576	HG2_Ill_MetaSV_902	GAAAGAAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATAATCTCACTCATAGGTGGGAATTGAACGATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAGAAAGGAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG4_Ill_MetaSV_947:HG2_PB_assemblyticsPBcR_4816:HG4_PB_assemblyticsfalcon_4844:HG3_PB_assemblyticsfalcon_4972:HG4_Ill_Krunchall_17660:HG4_Ill_Krunchall_17659:HG2_Ill_Krunchall_17340:HG2_10X_allpass_2056:HG4_PB_pbsv_12716:HG3_PB_SVrefine2Falcon1Dovetail_7743:HG2_PB_pbsv_12720:HG4_Ill_Krunchall_17658:HG2_Ill_tnscope_1421:HG4_PB_SVrefine2PBcRDovetail_6441:HG4_PB_SVrefine2Falcon1Dovetail_7781:HG4_Ill_SVrefine2DISCOVARDovetail_9067:HG4_Ill_GATKHCSBGrefine_8783:HG4_10X_allpass_2405:HG2_PB_SVrefine2PBcRplusDovetail_2074:HG2_PB_SVrefine2PB10Xhap12_9167:HG2_PB_SVrefine2Falcon1plusDovetail_2173:HG2_Ill_breakscan11_1824:HG2_Ill_MetaSV_902:HG2_Ill_GATKHCSBGrefine_8533:HG2_10X_SVrefine210Xhap12_8899;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8899:HG2_Ill_GATKHCSBGrefine_8533:HG2_Ill_MetaSV_902:HG2_Ill_breakscan11_1824:HG2_PB_SVrefine2Falcon1plusDovetail_2173:HG2_PB_SVrefine2PB10Xhap12_9167:HG2_PB_SVrefine2PBcRplusDovetail_2074:HG4_10X_allpass_2405:HG4_Ill_GATKHCSBGrefine_8783:HG4_Ill_SVrefine2DISCOVARDovetail_9067:HG4_PB_SVrefine2Falcon1Dovetail_7781:HG4_PB_SVrefine2PBcRDovetail_6441;NumExactMatchSVs=12;ClusterMaxShiftDist=0.163332;ClusterMaxSizeDiff=0.163332;ClusterMaxEditDist=0.163332;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-1704;DistBack=19540;DistForward=-1691;DistMin=-1691;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=11:122347577-122349300;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=689.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:27:0|1:31:4:0:21:1|0:0:35:68:0:0/1:46:19:0/1:135:58:.:.:.
chr11	122595306	HG2_Ill_GATKHC_20418	CTGGGCCAGGCCTGAACTGGCTTCTTAGAGGAGGTAGTAGCATTTGATCTTAAAA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_12717:HG4_Ill_Krunchall_17663:HG2_Ill_Krunchall_17342:HG2_PB_HySA_23160:HG4_Ill_svaba_15921:HG4_Ill_manta_3006:HG4_Ill_Krunchall_17662:HG4_Ill_GATKHC_20426:HG4_Ill_GATKHCSBGrefine_8784:HG4_Ill_Cortex_683:HG4_Ill_250bpfermikitraw_16864:HG4_Ill_150bpfermikitraw_16220:HG4_CG_vcfBeta_8119:HG2_PB_pbsv_12721:HG2_Ill_svaba_15858:HG2_Ill_scalpel_12049:HG2_Ill_breakscan11_1825:HG2_Ill_SpiralSDKrefine_3150:HG2_Ill_Krunchall_17341:HG2_Ill_GATKHC_20418:HG2_Ill_GATKHCSBGrefine_8534:HG2_Ill_Cortex_1653:HG2_Ill_250bpfermikitraw_16995:HG2_Ill_150bpfermikitraw_16020:HG2_CG_vcfBeta_7255;NumClusterSVs=25;ExactMatchIDs=HG2_CG_vcfBeta_7255:HG2_Ill_150bpfermikitraw_16020:HG2_Ill_250bpfermikitraw_16995:HG2_Ill_Cortex_1653:HG2_Ill_GATKHCSBGrefine_8534:HG2_Ill_GATKHC_20418:HG2_Ill_Krunchall_17341:HG2_Ill_SpiralSDKrefine_3150:HG2_Ill_breakscan11_1825:HG2_Ill_scalpel_12049:HG2_Ill_svaba_15858:HG2_PB_pbsv_12721:HG4_CG_vcfBeta_8119:HG4_Ill_150bpfermikitraw_16220:HG4_Ill_250bpfermikitraw_16864:HG4_Ill_Cortex_683:HG4_Ill_GATKHCSBGrefine_8784:HG4_Ill_GATKHC_20426:HG4_Ill_Krunchall_17662:HG4_Ill_manta_3006:HG4_Ill_svaba_15921;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0366972;PBcalls=3;Illcalls=20;TenXcalls=0;CGcalls=2;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=2;HG2count=14;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=29687;DistForward=5144;DistMin=5144;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=11:122595307-122595362;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=690.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:16:./.:12:7:12:6:1|0:0:20:31:0:0/1:27:18:./.:.:.:.:.:.
chr11	125053085	HG3_PB_SVrefine2Falcon1Dovetail_7752	CGATGAATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGTGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8910:HG3_PB_assemblyticsfalcon_4994:HG2_PB_assemblyticsPBcR_4836:HG4_PB_assemblyticsfalcon_4865:HG3_Ill_Krunchall_17031:HG2_Ill_Krunchall_17371:HG3_Ill_Spiral_13288:HG2_PB_HySA_23186:HG2_Ill_Spiral_873:HG3_PB_pbsv_12420:HG2_PB_pbsv_12736:HG4_PB_pbsv_12731:HG4_Ill_MetaSV_952:HG2_PB_assemblyticsfalcon_4963:HG4_PB_SVrefine2Falcon1Dovetail_7789:HG4_Ill_scalpel_11765:HG4_Ill_manta_3009:HG4_Ill_GATKHCSBGrefine_8795:HG4_10X_allpass_2409:HG3_PB_SVrefine2PBcRDovetail_6002:HG3_PB_SVrefine2Falcon1Dovetail_7752:HG3_Ill_MetaSV_990:HG3_Ill_GATKHCSBGrefine_8443:HG3_10X_allpass_2505:HG2_PB_SVrefine2PBcRplusDovetail_2084:HG2_PB_SVrefine2PB10Xhap12_9179:HG2_PB_SVrefine2Falcon2Bionano_6246:HG2_PB_SVrefine2Falcon1plusDovetail_2184:HG2_Ill_breakscan11_1827:HG2_Ill_SpiralSDKrefine_3164:HG2_Ill_GATKHCSBGrefine_8545:HG2_10X_allpass_2058;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8910:HG4_PB_SVrefine2Falcon1Dovetail_7789:HG4_Ill_scalpel_11765:HG4_Ill_manta_3009:HG4_Ill_GATKHCSBGrefine_8795:HG4_10X_allpass_2409:HG3_PB_SVrefine2PBcRDovetail_6002:HG3_PB_SVrefine2Falcon1Dovetail_7752:HG3_Ill_MetaSV_990:HG3_Ill_GATKHCSBGrefine_8443:HG3_10X_allpass_2505:HG2_PB_SVrefine2PBcRplusDovetail_2084:HG2_PB_SVrefine2PB10Xhap12_9179:HG2_PB_SVrefine2Falcon2Bionano_6246:HG2_PB_SVrefine2Falcon1plusDovetail_2184:HG2_Ill_breakscan11_1827:HG2_Ill_SpiralSDKrefine_3164:HG2_Ill_GATKHCSBGrefine_8545:HG2_10X_allpass_2058;NumExactMatchSVs=19;ClusterMaxShiftDist=0.101933;ClusterMaxSizeDiff=0.101933;ClusterMaxEditDist=0.101933;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-290;DistBack=-291;DistForward=-290;DistMin=-291;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=11:125053086-125053389;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=691.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:29:0|1:24:1:3:32:1|0:0:23:31:0:0/1:38:17:./.:.:.:.:.:.
chr11	125296385	HG4_Ill_SVrefine2DISCOVARDovetail_9082	CCAGCACGGCCACTAGCTCTGCTCAAGAAACAAGTCTGCGTCTCCTTATTGTGCTAGTTCATTCCTCAGTTCACTACACAATCCTTCAACGTTGGCCTCTTTGCCTGTCTGCACACTGTGCCTGGT	C	20	PASS	ClusterIDs=HG4_Ill_150bpfermikitraw_16247:HG2_PB_pbsv_12737:HG4_PB_pbsv_12732:HG4_PB_SVrefine2PBcRDovetail_6450:HG4_PB_HySA_18553:HG4_Ill_SVrefine2DISCOVARDovetail_9082:HG4_Ill_250bpfermikitraw_16894;NumClusterSVs=7;ExactMatchIDs=HG4_Ill_150bpfermikitraw_16247:HG4_PB_SVrefine2PBcRDovetail_6450:HG4_PB_HySA_18553:HG4_Ill_SVrefine2DISCOVARDovetail_9082:HG4_Ill_250bpfermikitraw_16894;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0323887;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.0404858;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-125;DistBack=14979;DistForward=-125;DistMin=-125;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=131;REFWIDENED=11:125296386-125296641;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=692.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:19:./.:13:6:5:5:./.:1:7:17:2:0/1:29:24:./.:.:.:.:.:.
chr11	127456298	HG2_Ill_manta_3548	ATGATTTAGGATATTACTGCAAAGTAGTTTGTTTAAAAAGAGGGCAGCCTGGTTGGAAATCTTCCCAGGAGAGCCATAGAAAATATGTTAGGGTAAGAAATAAGACTGACCTTGATTTCAATTAATGAAACCACT	A	20	PASS	ClusterIDs=HG3_Ill_Spiral_13305:HG3_PB_assemblyticsfalcon_5021:HG2_PB_assemblyticsPBcR_4862:HG4_PB_assemblyticsfalcon_4892:HG4_PB_SVrefine2Falcon1Dovetail_7801:HG3_Ill_Krunchall_17052:HG2_PB_SVrefine2PB10Xhap12_9195:HG2_PB_PB10Xdip_5148:HG2_PB_PB10Xdip_5147:HG2_PB_pbsv_12755:HG3_PB_pbsv_12436:HG3_PB_HySA_19275:HG3_Ill_MetaSV_993:HG2_PB_assemblyticsfalcon_4993:HG3_PB_SVrefine2PBcRDovetail_6011:HG3_PB_SVrefine2Falcon1Dovetail_7765:HG3_Ill_svaba_16063:HG3_Ill_scalpel_12280:HG3_Ill_manta_2898:HG3_Ill_SVrefine2DISCOVARDovetail_9323:HG3_Ill_GATKHCSBGrefine_8446:HG3_Ill_Cortex_722:HG3_Ill_250bpfermikitraw_16576:HG3_Ill_150bpfermikitraw_16106:HG3_10X_allpass_2507:HG2_PB_SVrefine2PBcRplusDovetail_2095:HG2_PB_SVrefine2PB10Xhap12_9194:HG2_PB_SVrefine2Falcon1plusDovetail_2199:HG2_Ill_svaba_15902:HG2_Ill_manta_3548:HG2_Ill_breakscan11_1828:HG2_Ill_SpiralSDKrefine_3182:HG2_Ill_MetaSV_908:HG2_Ill_GATKHCSBGrefine_8549:HG2_Ill_Cortex_1672:HG2_CG_vcfBeta_7278:HG2_10X_SVrefine210Xhap12_8923;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8923:HG2_CG_vcfBeta_7278:HG2_Ill_Cortex_1672:HG2_Ill_GATKHCSBGrefine_8549:HG2_Ill_MetaSV_908:HG2_Ill_SpiralSDKrefine_3182:HG2_Ill_breakscan11_1828:HG2_Ill_manta_3548:HG2_Ill_svaba_15902:HG2_PB_PB10Xdip_5147:HG3_PB_SVrefine2PBcRDovetail_6011:HG3_PB_SVrefine2Falcon1Dovetail_7765:HG3_Ill_svaba_16063:HG3_Ill_scalpel_12280:HG3_Ill_manta_2898:HG3_Ill_SVrefine2DISCOVARDovetail_9323:HG3_Ill_GATKHCSBGrefine_8446:HG3_Ill_Cortex_722:HG3_Ill_250bpfermikitraw_16576:HG3_Ill_150bpfermikitraw_16106:HG3_10X_allpass_2507:HG2_PB_SVrefine2PBcRplusDovetail_2095:HG2_PB_SVrefine2PB10Xhap12_9194:HG2_PB_SVrefine2Falcon1plusDovetail_2199;NumExactMatchSVs=24;ClusterMaxShiftDist=0.118519;ClusterMaxSizeDiff=0.118519;ClusterMaxEditDist=0.118959;PBcalls=16;Illcalls=18;TenXcalls=2;CGcalls=1;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=1;HG2count=18;HG3count=17;HG4count=2;NumTechs=4;NumTechsExact=4;SVLEN=-134;DistBack=56801;DistForward=-92;DistMin=-92;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=11:127456299-127456438;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=693.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:0|1:30:2:1:35:1|0:0:21:35:0:0/1:41:27:./.:.:.:.:.:.
chr11	127749541	HG2_PB_SVrefine2Falcon1plusDovetail_2200	TATGGAGACCACAGAAAGGAACCTGTATTTTGTTTCTTTCGTGAGTTTGACCAGGATGGTGGCATGATGTGATTCACTTTTTTTTTATTTTTATTTTTTGAGATGGAGTCTTGCTTTGTCACCCAGGCTGTAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGGACAACAGCTGCGTGCCACCACGCCAGGTTAATTTTTTTTTTTTTTTTTTTTTTTTGTACTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGTCTCAATCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAATGCTGGAATTACAGGTGTGATGCACCGCGCATGGCCGTGATTCACATTTTAAAAGATACCAGTGCTATTGTTGAACTATAGAGTGAGAATGAGTAACAAAAGAAACACCCATTGCCACAGAGCAGGGAAGAGAAGACAGTGGCTTGGACTAAGATGGCAACAGTTGAAGTGATGGGCAATGGTAGATTCTGGAGATATATGGATAGATACAGATATAGAAATATAGATTTTTTGAGACAGGCTGGAGTGTAGTGGAATTATCATTACTCACTGTAACCTTAGACTTCTGGTCTTAAGCAATCCTAGTGTCTCAGCTTCCCAAGTAGCTAGGAATACAGGCACAGACCATCATGCCCAGCTAATTTTAAAAAATATTTTATAGAAATGGGCTCTCACTACTTTGTCCAGGTTGGTGTTAGACTACCAACCTCAAGCAATCCTCCCACCTTGGCCTCTTGAAGTGCTGGGATTACAGGCATGAGCCAGTGCACCTGGCCATAAGATTTATATTTTGAGCTAACATCAAAATGACTTGCTGGTGGCAGAGATAAGAGAGAAAGAGAGAGAGAGATGAATTATGAATGCAAACTAAAGTTGGAGCCAGGGAAATTGGGTGGAGAGTGAGATTGGTTACAGAGGTAAGGAAACAAAGAGGAGCAAATTTTGTTGGGCGTAAAAGTGGGGAACCAAAAGCTTGTTAGGCTAAGTTAAGTTTGGAAGGTCCCTTGGATATCCAGATGGAGATGTGGAGTAGATGTATGTACATATCAGCCTACCTCTCAGGGGAGAGAGAGTGCACATATTGGCGCTGCTTAAAGTTAGAGGTCTTGATGAGATCAACCAGGAGACAAATTATCTGATCAAATCCTCTAGACTCATTTCCTCTACCTCCTCATCTATCATTTATTAAAAAAAATAAGAATGAAGAAATATTCTAAACATATAAAACTGCAAAAAATAATATAATAGTCAAGCAACCCCTACCAAGATTGAAAGAAAGATATTAACATTTTTCTGTATTTTCTCAGATGTCTCCCTTTTAGTTTTAAGAATTAAAGTATTACAGAAATAACTAAAGGTCTGTTCTATTATCTTTTCCCTCCCCAATCTAGAGGTAACCATTTTCCTGAAGTTGATGTATATCCTTCCCATGAACATTTAAAAATTTCATGTTTCTATATACATATACACTCACAATTTTTAAACACAATGCCATGTCTTTAAATTTTTGTAAATGATATTTATGCAATTATTAGTAATAATTATTAATTACCAATGTTATTACTATTATGCAATTATTGACGATGCTCTTTAACTCAACATTTTGTTTTGAAATGTATTCATACTGATGTAGATTAATTTCTTACATTTTACTTGCTATCTATATTATATCATTGTTTGAATAAGATGATTTTAGCCATTCCATGTGGATGGACAGTCAGACCATCTCCGTTGAATCTTTATTATCACAGGGCTTCAGTGATCAGCCTTGCATATGTCACTTGTGCATGTGGGCAAGTTTCTCCGGGGTACATAGTAAGAAGTAAAGAGCCAAGTCATATTGATAGGTATACTCCACTTCCCTGACTCCTGTATTGCCAAGTTGCCTTCCAAAACAGGTTTTCCTAATTTACAAAGCCTCCTGAAGTGTATGTGTGAGAATTCCTGTTTCCTCACATGCTCAACAGC	T	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_5150:HG3_Ill_Krunchall_17058:HG2_10X_allpass_2059:HG4_10X_allpass_2411:HG2_Ill_tnscope_1422:HG4_PB_pbsv_12744:HG4_PB_assemblyticsfalcon_4897:HG4_PB_SVrefine2PBcRDovetail_6457:HG4_PB_SVrefine2Falcon1Dovetail_7802:HG4_Ill_SVrefine2DISCOVARDovetail_9098:HG4_Ill_GATKHCSBGrefine_8798:HG3_PB_pbsv_12439:HG3_PB_assemblyticsfalcon_5025:HG3_PB_SVrefine2PBcRDovetail_6013:HG3_PB_SVrefine2Falcon1Dovetail_7766:HG3_Ill_SVrefine2DISCOVARDovetail_9327:HG3_Ill_MetaSV_994:HG3_Ill_GATKHCSBGrefine_8448:HG3_10X_allpass_2508:HG2_PB_pbsv_12756:HG2_PB_assemblyticsfalcon_4995:HG2_PB_SVrefine2PBcRplusDovetail_2096:HG2_PB_SVrefine2PB10Xhap12_9196:HG2_PB_SVrefine2Falcon2Bionano_6259:HG2_PB_SVrefine2Falcon1plusDovetail_2200:HG2_Ill_breakscan11_1829:HG2_Ill_SpiralSDKrefine_3186:HG2_Ill_SVrefine2DISCOVARplusDovetail_2456:HG2_Ill_MetaSV_909:HG2_Ill_GATKHCSBGrefine_8551:HG2_10X_SVrefine210Xhap12_8925:HG4_Ill_Krunchall_17709:HG2_Ill_Krunchall_17393:HG4_Ill_MetaSV_956;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8925:HG2_Ill_GATKHCSBGrefine_8551:HG2_Ill_MetaSV_909:HG2_Ill_SVrefine2DISCOVARplusDovetail_2456:HG2_Ill_SpiralSDKrefine_3186:HG2_Ill_breakscan11_1829:HG2_PB_SVrefine2Falcon1plusDovetail_2200:HG2_PB_SVrefine2Falcon2Bionano_6259:HG2_PB_SVrefine2PB10Xhap12_9196:HG2_PB_SVrefine2PBcRplusDovetail_2096:HG2_PB_assemblyticsfalcon_4995:HG2_PB_pbsv_12756:HG3_10X_allpass_2508:HG3_Ill_GATKHCSBGrefine_8448:HG3_Ill_MetaSV_994:HG3_Ill_SVrefine2DISCOVARDovetail_9327:HG3_PB_SVrefine2Falcon1Dovetail_7766:HG3_PB_SVrefine2PBcRDovetail_6013:HG3_PB_assemblyticsfalcon_5025:HG3_PB_pbsv_12439:HG4_Ill_GATKHCSBGrefine_8798:HG4_Ill_SVrefine2DISCOVARDovetail_9098:HG4_PB_SVrefine2Falcon1Dovetail_7802:HG4_PB_SVrefine2PBcRDovetail_6457:HG4_PB_assemblyticsfalcon_4897:HG4_PB_pbsv_12744;NumExactMatchSVs=26;ClusterMaxShiftDist=0.265398;ClusterMaxSizeDiff=0.265398;ClusterMaxEditDist=0.265398;PBcalls=15;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=14;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2043;DistBack=-1724;DistForward=-312;DistMin=-1724;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=11:127749542-127751585;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=694.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:63:0|1:37:0:0:37:0|1:60:0:1:39:0/1:55:16:0/1:138:75:2140:.:.
chr11	128042965	HG2_Ill_MetaSV_911	CCCATTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAGAAAAGCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8927:HG4_Ill_Krunchall_17713:HG2_Ill_Krunchall_17399:HG4_PB_pbsv_12746:HG4_Ill_manta_3010:HG4_Ill_MetaSV_957:HG4_Ill_GATKHCSBGrefine_8799:HG2_PB_pbsv_12759:HG2_Ill_manta_3549:HG2_Ill_breakscan11_1830:HG2_Ill_MetaSV_911:HG2_Ill_GATKHCSBGrefine_8552:HG2_10X_allpass_2060:HG4_Ill_Spiral_1010:HG2_Ill_Spiral_874:HG2_Ill_tnscope_1423:HG3_PB_SVrefine2Falcon1Dovetail_7769:HG2_PB_SVrefine2PB10Xhap12_9199:HG2_PB_SVrefine2Falcon2Bionano_6261:HG2_PB_SVrefine2Falcon1plusDovetail_2202:HG2_Ill_SVrefine2DISCOVARplusDovetail_2458;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_2060:HG2_Ill_GATKHCSBGrefine_8552:HG2_Ill_MetaSV_911:HG2_Ill_breakscan11_1830:HG2_Ill_manta_3549:HG2_PB_pbsv_12759:HG4_Ill_GATKHCSBGrefine_8799:HG4_Ill_MetaSV_957:HG4_Ill_manta_3010;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00609756;ClusterMaxSizeDiff=0.00609756;ClusterMaxEditDist=0.00914634;PBcalls=6;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=1595;DistForward=-326;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=11:128042957-128043300;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:23:0|1:27:2:0:19:0|1:31:0:0:35:0/1:31:31:0/1:32:15:.:.:.
chr11	128682717	HG2_PB_SVrefine2Falcon2Bionano_6262	GGACTTTATGGCTCATGCAGATTTTTAAGGTCATTTTTCTTCCCAAGGAAGAAACTTGCCTCCAGTTCCTTCACTGTTAGGTAGCTTATTTTCATTTTCTCTATTTTACAATGAAAAGAGTGAGACCTGGGAAGTCCTTGATTTGCAAGGAATTAGACTCACAGCATTGGTAACCCTAGAACCTTCTTAGGGTAACACTAAGTACCTTCTAGACAACATGTCTACCTAAATGAAATGGGATGTGTTTCGGAACATTTGTCTCCAGTTTTTTTTTAATCTTGCACCCTGCCATTTAAAAAGATGTGTAAAGCACATATTCTCAACATATGCACATTGATTTATAAATCATATATACAAACTGTTACATTATTCTTCATATTAGAAAACAAATACAAAATAGAACATTTTAAATGGTGATATAAAAATAAATTGAAACTGAAATTCTACTCTTTTCCTCCTATTTTCTCTATATTGAATATCCTCTGCTATTAACTCTCAAAACAAAGATGTTGGTCTTTAGTGAAAAAAGTGTATGCATGTACTGGATTTCTAGTGACTTCCAAGAAAGGAGAAAATTAAAACTTGGTATTAGTGGCCCAAGCATAGAAAGAGGAATGATGAAGGCCAGGTATGTTTAAGAACAAACTAGCTGAATTCTTTGGCAGATCTCCATCTTAGCCACGCAATTTCCCCA	C	20	PASS	ClusterIDs=HG4_Ill_Krunchall_17723:HG4_Ill_GATKHCSBGrefine_8803:HG2_Ill_GATKHCSBGrefine_8554:HG2_Ill_tnscope_1424:HG2_Ill_breakscan11_1831:HG2_Ill_SpiralSDKrefine_3193:HG4_PB_SVrefine2PBcRDovetail_6460:HG4_Ill_manta_3013:HG4_Ill_SVrefine2DISCOVARDovetail_9102:HG4_Ill_Cortex_692:HG3_PB_assemblyticsfalcon_5032:HG3_PB_SVrefine2Falcon1Dovetail_7770:HG3_Ill_Cortex_727:HG2_PB_assemblyticsfalcon_5003:HG2_PB_SVrefine2PB10Xhap12_9200:HG2_PB_SVrefine2Falcon2Bionano_6262:HG2_PB_SVrefine2Falcon1plusDovetail_2203:HG2_Ill_manta_3550:HG2_Ill_SVrefine2DISCOVARplusDovetail_2460:HG2_Ill_Cortex_1682:HG2_10X_SVrefine210Xhap12_8931:HG2_10X_allpass_2061:HG4_Ill_Spiral_1011:HG2_Ill_Spiral_875:HG4_PB_pbsv_12749:HG4_10X_allpass_2412:HG4_Ill_Krunchall_17724:HG2_PB_pbsv_12761:HG2_Ill_Krunchall_17404:HG4_Ill_MetaSV_958:HG2_Ill_MetaSV_912;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8931:HG2_Ill_Cortex_1682:HG2_Ill_SVrefine2DISCOVARplusDovetail_2460:HG2_Ill_manta_3550:HG2_PB_SVrefine2Falcon1plusDovetail_2203:HG2_PB_SVrefine2Falcon2Bionano_6262:HG2_PB_SVrefine2PB10Xhap12_9200:HG2_PB_assemblyticsfalcon_5003:HG3_Ill_Cortex_727:HG3_PB_SVrefine2Falcon1Dovetail_7770:HG3_PB_assemblyticsfalcon_5032:HG4_Ill_Cortex_692:HG4_Ill_SVrefine2DISCOVARDovetail_9102:HG4_Ill_manta_3013:HG4_PB_SVrefine2PBcRDovetail_6460;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00865801;ClusterMaxSizeDiff=0.00865801;ClusterMaxEditDist=0.00865801;PBcalls=9;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=3;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-693;DistBack=0;DistForward=-694;DistMin=-694;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=11:128682717-128683410;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9986;PctRecOverlap=0.9971;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:34:0|1:49:0:0:28:0|1:61:0:1:28:0/1:69:21:0/1:69:16:.:.:.
chr11	130496397	HG2_10X_SVrefine210Xhap12_8938	TTCTTGATGCTTGAAATTAGTTCACAGAGGAGTAAAATGTTGCAGTTGAACAATAAGAAATAAGACTTAAAAAGGTATCCATGCTAAAAAGAAAAAAGTAAAACTAAATCTACTTGCAGATGACATGATCTAGTATACAGATAATCATAAGGTATCTACCCAAACCATTAAAACTCATAATTGAGTTCAGCAAGGTTGCCAGATGCAAGATCAAAATATAAAAATCCATTATATTTTTATACACTA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_12763:HG4_Ill_MetaSV_960:HG2_PB_HySA_23266:HG2_Ill_MetaSV_914:HG4_Ill_svaba_15991:HG4_Ill_scalpel_11798:HG4_Ill_SVrefine2DISCOVARDovetail_9111:HG4_Ill_GATKHCSBGrefine_8811:HG4_Ill_Cortex_696:HG4_10X_allpass_2414:HG2_PB_assemblyticsfalcon_5022:HG2_PB_SVrefine2PBcRplusDovetail_2108:HG2_PB_SVrefine2PB10Xhap12_9212:HG2_PB_SVrefine2Falcon1plusDovetail_2212:HG2_Ill_svaba_15926:HG2_Ill_manta_3554:HG2_Ill_breakscan11_1833:HG2_Ill_SpiralSDKrefine_3205:HG2_Ill_GATKHCSBGrefine_8559:HG2_Ill_Cortex_1688:HG2_10X_SVrefine210Xhap12_8938:HG2_PB_assemblyticsPBcR_4888:HG2_PB_SVrefine2PB10Xhap12_9211:HG2_PB_PB10Xdip_5166:HG2_PB_PB10Xdip_5167:HG4_Ill_Krunchall_17739:HG2_PB_pbsv_12774:HG2_Ill_Krunchall_17424;NumClusterSVs=28;ExactMatchIDs=HG2_PB_PB10Xdip_5167:HG2_10X_SVrefine210Xhap12_8938:HG2_Ill_Cortex_1688:HG2_Ill_GATKHCSBGrefine_8559:HG2_Ill_SpiralSDKrefine_3205:HG2_Ill_breakscan11_1833:HG2_Ill_manta_3554:HG2_Ill_svaba_15926:HG2_PB_SVrefine2Falcon1plusDovetail_2212:HG2_PB_SVrefine2PB10Xhap12_9212:HG2_PB_SVrefine2PBcRplusDovetail_2108:HG2_PB_assemblyticsfalcon_5022:HG4_10X_allpass_2414:HG4_Ill_Cortex_696:HG4_Ill_GATKHCSBGrefine_8811:HG4_Ill_SVrefine2DISCOVARDovetail_9111:HG4_Ill_scalpel_11798:HG4_Ill_svaba_15991;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0242915;ClusterMaxSizeDiff=0.0242915;ClusterMaxEditDist=0.0284553;PBcalls=11;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-245;DistBack=5438;DistForward=31675;DistMin=5438;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=11:130496398-130496642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=697.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:34:0|1:25:0:1:33:0|1:55:0:0:27:0/1:50:21:./.:.:.:.:.:.
chr11	132083612	HG2_Ill_manta_3558	TGGGCCACCATTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG3_PB_HySA_19321:HG2_PB_assemblyticsfalcon_5047:HG2_PB_HySA_23295:HG3_Ill_Krunchall_17096:HG2_Ill_Krunchall_17440:HG2_PB_assemblyticsPBcR_4906:HG4_Ill_Spiral_1013:HG3_Ill_Spiral_13340:HG2_Ill_Spiral_876:HG4_PB_HySA_18609:HG4_PB_pbsv_12777:HG4_Ill_MetaSV_964:HG3_Ill_MetaSV_1002:HG2_Ill_tnscope_1425:HG2_Ill_MetaSV_916:HG4_PB_SVrefine2Falcon1Dovetail_7822:HG4_Ill_scalpel_11812:HG4_Ill_manta_3018:HG4_Ill_SVrefine2DISCOVARDovetail_9121:HG4_Ill_GATKHCSBGrefine_8820:HG4_10X_allpass_2416:HG3_PB_pbsv_12466:HG3_PB_SVrefine2PBcRDovetail_6028:HG3_PB_SVrefine2Falcon1Dovetail_7786:HG3_Ill_scalpel_12309:HG3_Ill_manta_2904:HG3_Ill_SVrefine2DISCOVARDovetail_9346:HG3_Ill_GATKHCSBGrefine_8462:HG3_10X_allpass_2510:HG2_PB_pbsv_12787:HG2_PB_SVrefine2PBcRplusDovetail_2117:HG2_PB_SVrefine2PB10Xhap12_9221:HG2_PB_SVrefine2Falcon2Bionano_6280:HG2_PB_SVrefine2Falcon1plusDovetail_2220:HG2_Ill_scalpel_12106:HG2_Ill_manta_3558:HG2_Ill_SVrefine2DISCOVARplusDovetail_2474:HG2_Ill_GATKHCSBGrefine_8567:HG2_10X_allpass_2064:HG2_10X_SVrefine210Xhap12_8946:HG2_Ill_breakscan11_1835;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8946:HG2_10X_allpass_2064:HG2_Ill_GATKHCSBGrefine_8567:HG2_Ill_SVrefine2DISCOVARplusDovetail_2474:HG2_Ill_manta_3558:HG2_Ill_scalpel_12106:HG2_PB_SVrefine2Falcon1plusDovetail_2220:HG2_PB_SVrefine2Falcon2Bionano_6280:HG2_PB_SVrefine2PB10Xhap12_9221:HG2_PB_SVrefine2PBcRplusDovetail_2117:HG2_PB_pbsv_12787:HG3_10X_allpass_2510:HG3_Ill_GATKHCSBGrefine_8462:HG3_Ill_SVrefine2DISCOVARDovetail_9346:HG3_Ill_manta_2904:HG3_Ill_scalpel_12309:HG3_PB_SVrefine2Falcon1Dovetail_7786:HG3_PB_SVrefine2PBcRDovetail_6028:HG3_PB_pbsv_12466:HG4_10X_allpass_2416:HG4_Ill_GATKHCSBGrefine_8820:HG4_Ill_SVrefine2DISCOVARDovetail_9121:HG4_Ill_manta_3018:HG4_Ill_scalpel_11812:HG4_PB_SVrefine2Falcon1Dovetail_7822;NumExactMatchSVs=25;ClusterMaxShiftDist=0.118022;ClusterMaxSizeDiff=0.118022;ClusterMaxEditDist=0.118022;PBcalls=15;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=19590;DistForward=61671;DistMin=19590;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=11:132083613-132083940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=698.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:./.:1:3:0:3:1/1:0:23:0:11:1/1:0:34:0/1:3:7:.:.:.
chr11	133314843	HG2_PB_SVrefine2PBcRplusDovetail_2124	TACCCCATCTACACAATTTCAGGTATGAAAAGTCACCAAGAGACCACAGACCATATCCATGGTGATCCTGGATGGTGGATGGAGACCACCAC	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_7829:HG3_PB_assemblyticsfalcon_5081:HG3_PB_HySA_19329:HG3_PB_SVrefine2PBcRDovetail_6034:HG3_PB_SVrefine2Falcon1Dovetail_7791:HG3_Ill_SVrefine2DISCOVARDovetail_9353:HG2_PB_assemblyticsfalcon_5056:HG2_PB_assemblyticsPBcR_4916:HG2_PB_SVrefine2PBcRplusDovetail_2124:HG2_PB_SVrefine2PB10Xhap12_9229:HG2_PB_SVrefine2Falcon2Bionano_6287:HG2_PB_SVrefine2Falcon1plusDovetail_2227:HG2_PB_assemblyticsPBcR_4917:HG2_PB_pbsv_12797:HG3_Ill_GATKHC_20401:HG2_Ill_GATKHC_20532:HG3_PB_pbsv_12475;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2227:HG2_PB_SVrefine2Falcon2Bionano_6287:HG2_PB_SVrefine2PB10Xhap12_9229:HG2_PB_SVrefine2PBcRplusDovetail_2124:HG2_PB_assemblyticsPBcR_4916:HG2_PB_assemblyticsfalcon_5056:HG3_Ill_SVrefine2DISCOVARDovetail_9353:HG3_PB_SVrefine2Falcon1Dovetail_7791:HG3_PB_SVrefine2PBcRDovetail_6034;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.10989;PBcalls=14;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-91;DistBack=-144;DistForward=-59;DistMin=-144;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=364;REFWIDENED=11:133314714-133315168;PctSeqSimilarity=0.9839;PctSizeSimilarity=1;PctRecOverlap=0.337;SizeDiff=0;StartDistance=61;EndDistance=61;GTMatch=0;TruScore=77;MatchId=699.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:26:0|1:25:0:1:29:./.:0:2:15:1:0/1:16:9:./.:.:.:.:.:.
chr11	133869979	HG3_PB_SVrefine2PBcRDovetail_6037	TCCATCCTGGCATCCTGGGACAGAAGAGTTCCCAGGGTGTGGGACTTCCAGCACTAAAACCAAGACAGTCCTCGGCACACCAGGATGAGTTGGACTTTGGAGTCCTGCAAGCAGGCGCTCAGCACCAGCACGGGTGA	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2231:HG3_PB_HySA_19336:HG2_PB_pbsv_12804:HG3_PB_pbsv_12484:HG2_PB_PB10Xdip_5199:HG3_PB_SVrefine2Falcon1Dovetail_7795:HG3_PB_assemblyticsfalcon_5088:HG4_PB_SVrefine2Falcon1Dovetail_7832:HG3_PB_SVrefine2PBcRDovetail_6037:HG2_PB_SVrefine2PBcRplusDovetail_2128:HG2_PB_SVrefine2PB10Xhap12_9233;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2231:HG4_PB_SVrefine2Falcon1Dovetail_7832:HG3_PB_SVrefine2PBcRDovetail_6037:HG2_PB_SVrefine2PBcRplusDovetail_2128:HG2_PB_SVrefine2PB10Xhap12_9233;NumExactMatchSVs=5;ClusterMaxShiftDist=0.156716;ClusterMaxSizeDiff=0.156716;ClusterMaxEditDist=0.18251;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-136;DistBack=59322;DistForward=-137;DistMin=-137;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=681;REFWIDENED=11:133869980-133870796;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=700.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:22:1:3:23:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr11	134245634	HG4_PB_SVrefine2Falcon1Dovetail_7836	GACATGTGAGTCCTGGCAGAAGCCATGGCCCATGTCTGCACATCCAGGGAGGAGGACAGAAGGCCCAGCTCACATGTGAGTCCTGGCAGAAGCCATGGCCCATGTCTGCACATCCAGGGAGGAGGACAGAAGGCCCAGCTCACATGTGAGTCCTGGCAGAAGCCATGGCCCATGTCTGCACATCCAGGGAGGAGGACAGAAGGCCCAGCTC	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6294:HG2_PB_assemblyticsfalcon_5070:HG2_PB_SVrefine2Falcon1plusDovetail_2236:HG4_PB_pbsv_12795:HG2_PB_pbsv_12810:HG4_PB_SVrefine2PBcRDovetail_6479:HG4_PB_SVrefine2Falcon1Dovetail_7836:HG2_PB_SVrefine2PBcRplusDovetail_2133:HG2_PB_SVrefine2PB10Xhap12_9239;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6294:HG4_PB_SVrefine2PBcRDovetail_6479:HG4_PB_SVrefine2Falcon1Dovetail_7836:HG2_PB_SVrefine2PBcRplusDovetail_2133:HG2_PB_SVrefine2PB10Xhap12_9239;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0386473;ClusterMaxEditDist=0.135593;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-210;DistBack=-71;DistForward=-211;DistMin=-211;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=211;REFWIDENED=11:134245635-134246055;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=701.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:0|1:36:0:1:28:./.:0:0:0:3:./.:4:5:./.:.:.:.:.:.
chr11	134665643	HG4_Ill_svaba_16038	GGAGGGGGAGTATTATCTTCTGGAGGGGGAGTATTATCTTCTGGAGGAGGA	G	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_8580:HG4_PB_pbsv_12815:HG3_PB_pbsv_12512:HG2_PB_pbsv_12831:HG4_Ill_svaba_16038:HG4_Ill_scalpel_11830:HG4_Ill_GATKHC_20561:HG4_Ill_GATKHCSBGrefine_8836:HG4_Ill_250bpfermikitraw_16979:HG4_Ill_150bpfermikitraw_16327:HG3_Ill_svaba_16131:HG3_Ill_scalpel_12327:HG3_Ill_GATKHC_20429:HG2_Ill_svaba_15979:HG2_Ill_scalpel_12123:HG2_Ill_GATKHC_20564;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8580:HG4_Ill_svaba_16038:HG4_Ill_scalpel_11830:HG4_Ill_GATKHC_20561:HG4_Ill_GATKHCSBGrefine_8836:HG4_Ill_250bpfermikitraw_16979:HG4_Ill_150bpfermikitraw_16327:HG3_Ill_svaba_16131:HG3_Ill_scalpel_12327:HG3_Ill_GATKHC_20429:HG2_Ill_svaba_15979:HG2_Ill_scalpel_12123:HG2_Ill_GATKHC_20564;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0384615;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=21;DistForward=54;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=10132;REFWIDENED=11:134665319-134675500;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:36:1/1:2:20:3:20:./.:0:7:0:3:./.:0:6:./.:.:.:.:.:.
chr11	134803558	HG3_PB_SVrefine2Falcon1Dovetail_7816	AAGACCTCACAGGGGTGTCTAAGGGAAAGAATATAGTCATGAGGCTCACAGAGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACATGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACACGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGCGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACACGGGTGTCCAAGGGACAGAATACAGTCATGAAAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGAGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACACGGGTGTCCAAGGGACAGAATATAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGGCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGGCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGGCATGAGAGCTCACACGGGTGTCCAAGAGACAGAATACAGTCATGAGAGCTCACAGCGGTGTCCAAGGGACAGAATACAGTCATGAGAACTCACACGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGGCATGAGAGCTCACAGGGGTGTCCAAGGGAAAGAATACAGTCATGAGGCTCACAGAGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGAGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATAGAGTCATGAGAGCTCACAGGGGGTCCAAGGGACAGAATACAGTCATGAGAGCTCACACGGGTGTCCAAGGGCCAGAATACAGGCATGAGAGCTCACAGTGGTGTCCAAGGGACAGAATACAGTCATGAGAGCTCACAGGGGTGTCCAAGGGACAGAATACAGTCATG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2256:HG4_10X_allpass_2421:HG2_10X_allpass_2066:HG3_10X_allpass_2513:HG4_PB_pbsv_12820:HG3_PB_pbsv_12519:HG3_PB_SVrefine2Falcon1Dovetail_7816:HG2_PB_SVrefine2PBcRplusDovetail_2147:HG2_PB_SVrefine2PB10Xhap12_9256:HG2_PB_SVrefine2Falcon2Bionano_6308;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2256:HG3_PB_SVrefine2Falcon1Dovetail_7816:HG2_PB_SVrefine2PBcRplusDovetail_2147:HG2_PB_SVrefine2PB10Xhap12_9256:HG2_PB_SVrefine2Falcon2Bionano_6308;NumExactMatchSVs=5;ClusterMaxShiftDist=0.19117;ClusterMaxSizeDiff=0.19117;ClusterMaxEditDist=0.226318;PBcalls=7;Illcalls=0;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-1277;DistBack=1501;DistForward=-1278;DistMin=-1278;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1278;REFWIDENED=11:134803559-134806113;PctSeqSimilarity=0.9682;PctSizeSimilarity=1;PctRecOverlap=0.115;SizeDiff=0;StartDistance=-1131;EndDistance=-1131;GTMatch=0;TruScore=69;MatchId=704.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:41:0|1:15:3:2:24:./.:17:1:82:0:0/0:43:0:0/1:50:16:2585:.:.
chr12	240152	HG4_Ill_manta_3026	ATCCTCAGCACTGTGCCCCCCAGCTAGCGGCTCTTCCTCCCCACACCTGGCCCCCGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8978:HG3_PB_assemblyticsfalcon_5128:HG4_PB_assemblyticsfalcon_5010:HG2_PB_pbsv_12848:HG4_PB_pbsv_12833:HG2_PB_assemblyticsfalcon_5113:HG3_PB_pbsv_12537:HG4_Ill_svaba_16044:HG4_Ill_scalpel_11834:HG4_Ill_manta_3026:HG4_Ill_Krunchall_17795:HG4_Ill_GATKHC_20575:HG4_Ill_GATKHCSBGrefine_8842:HG4_Ill_250bpfermikitraw_16985:HG4_Ill_150bpfermikitraw_16333:HG3_Ill_svaba_16136:HG3_Ill_scalpel_12331:HG3_Ill_Krunchall_17129:HG3_Ill_GATKHC_20442:HG3_Ill_GATKHCSBGrefine_8487:HG3_Ill_250bpfermikitraw_16647:HG3_Ill_150bpfermikitraw_16169:HG2_PB_assemblyticsPBcR_4971:HG2_Ill_svaba_15985:HG2_Ill_scalpel_12127:HG2_Ill_manta_3562:HG2_Ill_SpiralSDKrefine_3240:HG2_Ill_Krunchall_17474:HG2_Ill_GATKHC_20575:HG2_Ill_GATKHCSBGrefine_8584:HG2_Ill_250bpfermikitraw_17125:HG2_Ill_150bpfermikitraw_16132:HG4_PB_SVrefine2PBcRDovetail_6495:HG4_Ill_SVrefine2DISCOVARDovetail_9148:HG3_Ill_SVrefine2DISCOVARDovetail_9371:HG2_PB_SVrefine2PB10Xhap12_9268:HG2_Ill_SVrefine2DISCOVARplusDovetail_2501;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16132:HG2_Ill_250bpfermikitraw_17125:HG2_Ill_GATKHCSBGrefine_8584:HG2_Ill_GATKHC_20575:HG2_Ill_Krunchall_17474:HG2_Ill_SpiralSDKrefine_3240:HG2_Ill_manta_3562:HG2_Ill_scalpel_12127:HG2_Ill_svaba_15985:HG2_PB_assemblyticsPBcR_4971:HG3_Ill_150bpfermikitraw_16169:HG3_Ill_250bpfermikitraw_16647:HG3_Ill_GATKHCSBGrefine_8487:HG3_Ill_GATKHC_20442:HG3_Ill_Krunchall_17129:HG3_Ill_scalpel_12331:HG3_Ill_svaba_16136:HG4_Ill_150bpfermikitraw_16333:HG4_Ill_250bpfermikitraw_16985:HG4_Ill_GATKHCSBGrefine_8842:HG4_Ill_GATKHC_20575:HG4_Ill_Krunchall_17795:HG4_Ill_manta_3026:HG4_Ill_scalpel_11834:HG4_Ill_svaba_16044;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.105263;PBcalls=9;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-56;DistBack=27064;DistForward=2534;DistMin=2534;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=69;REFWIDENED=12:240135-240259;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=705.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:53:1/1:5:22:2:16:1/1:0:7:0:6:1/1:0:34:./.:.:.:.:.:.
chr12	292228	HG4_PB_SVrefine2PBcRDovetail_6497	ACAAATGAATAACCTGAGGACCAACAGGGAGAACGTAACTATGAATGCTGCAGAGATTTTCAAAATAAAATACTTCAAATAAACTATAAACCTATGGCAATAATTTTGAAACCCTCCACAAAATGAACACTGTGCTAGAAAAATATCTTACCAAATCTTGCTCAAGAACAAACAGAAAATTTGGGATGTATAACCATTAAATTAAAGTGGAATAGGTAATTACAAGTCTTAGGGCCAGGAATCCCAGCACTTCGGGAGACCAAGGCAGGAGGATCACTTGAAGCCAGGAGTTCAAGACCAGCCTGGGCAACATAGTGAGACCCCCATCTATACACAGATCTTAAAAATAAGCTAGGCATGGTGGTATGCAACTGTAATCCCAGCTATTCGAAGGCTGAGGTAGGCAGATCACTTGGGCCCAGGAGGTTGAGGCTGCAGTGAACCGTGACTGCACCACTGAACTCCAACCTGGGCAACAGAGGGAGACCCTATTTCAAAAGAAAAAAAAAAGAAAGAAAAAGAGGGCCAGGTATGGTGGCTGACGCCTGTAATCCCAGCACTTTGGGAGCCCAAGGTGGGCAGATCACTTGAGTTCAGGGGTTCGAGACCAGCCTGAGCAACGTCGTGAAATCTCGTCTCTACCAAAAATACAAAAAATTAATGTCACTCCAGCCTGGGTGACAGAGTGAGACTCTGTCTCAAAAAAAATAAAAAAGAAGGAAAGTCTATTCACCATCGCCCAGCCCCCACCCCCAAGAAAAATCACACACACAACACCCGGCCAGATGATTTTACAAAATTCTACTACACTTCAAGGAACAGATAATTCCAATATCATATTAACTCTTTCAGAAAAGAGAAACAGAACATCTCCAAACTCCTTTTCATGAGCCTGGTGTAATCTCAAAAACAAAAACTAAAGCAGACAAGCACGGTATGAGAAAAAGAAGACTACCAACCAATCTTGTTTATGGGCATAAATTCAGAAATTCTAAACACAATATTAGCAAACTGAACCTAGTACTGAATAACAAAAAAAAATATGCCATAACCAAGTAGGGTTTGCCCCAAGAATGAACAGATGATTGAATATTAGAAAAATATAATAATTTGTTACATTAACAAATTAAAGGAGAAAAACAATATAATTATCTCAATAGATGCAGAAAAAGCAATCCATAAAATTCAACCCTTACTGTTGATTTGAAAAAAACCTATAGAACTTGGAATGGAAGAAAACTTCATAGCCCAGTAAATGATATCTATCAAAAATCATCAGCTGGCCAGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACTTGAGATCAGGAGTTCGAGACCAGTCTGGCCAACATGGCAAAACCTCATCTCTACTAAAAACACAAAAATTCGGTGGTTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAATGAGCTGAGATGGCGCCACTGCACTCTAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAATAAATAAATAAAAAAATAAAAATACAAAAATTAGCCAAGCATGGTGGCTTATGCCTGTAATCCAGCTACTGGGGAGGATGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGTAGTGAGCTGAGATCAAGCCACTGCGCTCCAGCCTGGGGGACAGAATGAAACTGTCTCAAAAAAAAAAAAAAATCATCAGCCGTCATACTTCCTAATGAAATGTTAGGGTTCCTGTCAAAACCAGGAAGGAAGCAAGGATGCCAGCTGCCACCACTTCTAGTTACCAAGTGAAGGAAGATAAGAGAAAGAATCATGATCGGAGACATAAAACTGTCATTATTTCCAGACAGTCTGAGTGTCTATGTAAAACACCCTAAAGAACCAAGAGGAAAACAACAACTTTAATTAACCCAGAGGAAAAGGCTGAGGCTGGACAGTGAGCCCAGGTCTCCGGACAGCTGGCCGGGTAAGGCCGCTCCCCCGGCCCCACCCGCTGTCATGGCTACCCTCTGTCCTGCTCCCCGGAACCTCCTCTCCATGACAAACCCAAATTCCAAATGCACTTGTTCAGGACCCACTCTGGCTACCTTTGCTTGCTCCCTGTGCCCGTGTCTTAGTGAGATGGGGACTGAGTCCTGCTTGGGGAAGGGACTTGCCCACTTCGAGTCCCTCATGCTGGGGTGCAGTGTCAGAGTTCTGGCCTCGGGGCCAGGGCCTTTTGGATGTGACAGCCACCCTCTGTGTGTTAGTGAGATGTGCTTGGGCAGAAAAAGCCTCAGAATGTGACTGCACCAGAAGTTCCGGCTAGACTCTTGTTATAGCCACAGGTTATGCACTGACCCTGTGGATGGACACGAGCCTGCAAGGACTCAGCCTTGGCAGGGAGCAAGCTCCCCTCTCTGTCTGTGGCATCATCTGGCAACTTGCACTCGCCTCCCGTTACTTCCCAGTCACGTGCCAGCAGGTTCCTCAGACCTGACAGGCCATCTGCCCCTGCTGTGGCCAGACTGGAAGCAGAGAGCGCTGGAGTGCGGGTCGCCAGGGCCCAGGGCACTGACCCACCTCAACCCTGTGCCACCTGCCAGGCTTGGCTCTCATCTCACCCCATCCTGTCTGGCAAACACATCCTCCCATGGCCGCTGCATCAATGGGTGGTTAACAAGCTTCTCATCCCTGTTAGATCCAATCAGCCCTTGTTACTTCACTGAGCAGCAGAACCTGCAAGGAAGCTGGGCATGCGAGCACGGAGGTGGCAGGGACAGACACAGCCAGTCTTCACCTCCTCACAGCAAGGACAGGGTGAGCCCAGGGTCAGGGGAGGGCTCTGGAGGGGTCAGAGGAGGTGAGGCTGTGGCAGAGAGGCAGGAGGCTCAGGCAGAAGGGCACGAGGGGGCTGAGGGACGCCTCTGAAGAGGGGCCACGCCTGACTCTCAAAGAGGGTGACTCTCGCGCTCTGGGAAGTGGCCACGACAGCACCCACAGGCCACAGTGCACGCTAAAGCTCAGCTGTCCAGGAGCACACTTGACCCAACAGAGAGCCCACATGAGAGGAGCCGAGGCCTTCCACCGGCAGCCACAGCAGCTGTCAGCCAGGTGAAGGAACTGCAAGCAATTGGATCCAAGGATAGGTATTATCTACTGCTGTGTAAAAAATCACCCCAAAGCTTACGGCTTAAAACAACCATATGCATTTCTCACCTCTCACTGGGGTCAGGCATTTGGGGCCCACTTGGCTGGGCATTTCTGGCTCAGTGCCTCTGTAAGGCTGTAGTCCCTGTGTCAGCCAGGGCTGCTGCCACTAGAAGCCTTGGCCAGCTGGGAGGATACATTTCCACGCAGTGTATTCACCTTGCAGCAAGCTGCTGCTGTTGACCATTAGTGGGAGGCCTGGATTCCACGTGGGCCTCTCTATTGGGCCAACTGTCCCCCCAGACAATTAAGCTTTGGTGTACTCTGCCACGTGGGCGCTGCTGATGTTAACACATCTATTGAGATGTAGCTCTGAAATTAGAGGTATCCACTACCCTTCTTCGGGAGAATGTCCAGGTGGGAGAGAGACTTGACCCAGGATTCATGGATGAATAGCATCATAGGGTGTGAGGTCCACACCGGAGCAGGCTGGAGCCTGTGGTAACCCTGCTACCACCACCCCTTCTGAGGCACCAGGACCCCCAACCACTGCCCTCTGCTGTCCCTTGCGTCGCACCCAAGGGCTCCTGTTCCCTCCCCTGCCCAAAGTTCTCACTTTCTCCGCTAGGGCACAGATTATGAATTCAAACGCAAAAGCGAATATGTGAGAAAACCAGGTGTGACAGAAGTGGGAAGACTGTGGCAAACTCCAGCATGCCTCAGGGCTTCTGCTGCAAAAATCAATTTTTTCATGCCACACTGGCCAAATTGTAGCTGCCAGATTTGGCCTCTGTTCACCAGTCTGCAACTCAAACACCAAAGGAAACGAGATGAAAGTGTGCCCAGAGTAAGTGGGTTCTTGGTCTCACTGACTTCAAGCATGAAGCCGCAGACCCTCACAGTGAGGGTTACAGTTCTTAAAGGCGGCGTGTCCGGAGTTTGTTCCTTCTAACGTTCAGATGTGTTCGGAGTTTTTTCCTTCTGGTAGGTTCGTGGTCTCACCAGCTCCGGAGTGAAACTGCGGACCTTCGCGATGAGTGCTACAACTCTGAAGGCGGCGCGTCTGGAGTTTTTTTTTCCTCCCGATGGTTCAGTGGTCTCGCTGGTTTCAGAAGTAAACCTGCAGATTTTCCCAATGAGTGTTACACCTCATAAAGGCAGAGTAGACCCAAACAGTGAGCAGCAGCAAGATTTACTGCAAAAGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAACCACACACACAGCACCCACTGCACACAACGCGACCCCAGCGGGTTACCACTAGGGCCTCCGGCAGCCTGCTTTTATTCTCTTACCTGGCCCCACCCACATCCTGCTGATTGGTCCATTTTACAGAGAGCCGATTGGTCCATTTTACAGAGCGCTGATTGGTCCGTTTTGACAGGGTTTTGATTGGTGTGTTTACAACGCCTGAGCTAGACACAAAGGTTCTCCAAGTCCCCACCAGAGAAGCTAGATACAGAGTGTGGATTGGTGCATTCACAAACCCTGAGCTAGACACAGGGTGCTGATTGGTGTGTTTACAAACCTTGAGCTAGATACAGAGTGCCGATTGGTGTATTTACAATCCCTGAGCTAGACATAAAGGTTCTCCTAGTCCCCACCAGACTCAGGAGCCCAGCTGGCTTCACCCAGTGGATCCCTCACTGGGGCCACAGGTGGAGCTGCCTCCCAGTCCGGTTCCGTGCGCCCGCACTTCTCAGCCCTTGGGTGGTCGATGGGACTGGGTGCCCTGGAGCAGGGGGCGGCGCTGGTCGGGGAGGCTCGGGCCGCACAGGAGCCCATGGAGGGGGAGGGAGGCTCAGGCATGGCGAGCTGCAGGTTCCGAGCCCTGCCCCACGGGAAGGCAGCTAAGGCCCAGCGAGAAATTGAGCACAGCAGCTGCTGGCCCAGGTGCTAAGCCCCTCACTGCCCCGGGCCGGCGGGGCCGGCAGGCCGCTCCGATTGTGGGGCCCGCCGAGCCCACGCCCACCCGGAACTCGCGCTGGCCCGCAAGCGCCGCGCGCAGCCCCGCTTCCCGCCAGCGCCTCTCCCTCCACACCTCTCTGCAAGCTGAGGGAGCCGGCTCCGGCCTTGGCCAGCCCAGAAAGGGGCTCCCACAGTGCAGCGGGGGGCTGAAGGGCTCCTCAAGCGCAGCCAGAGTGGGCGCCGAGAGCGAGCGAGGGCTGTGAGGGCTGGGGGCACGCTGTCACCTCTCAAAAGCAAACCCAAATCACGACCCCACAGCTGCTCCTTACGCACGCACGTCGTATGCACACCCACACACACACAGGCGCGTGAACTCATGTGCACACACAGGCACACACACACACCTGTACTGGTGCTCTGGGCAGGCTGGAGAGTGAAACAGTTGCTCCTTGCCCAGGTTGTGGAGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8982:HG2_10X_allpass_2068:HG4_PB_assemblyticsfalcon_5015:HG2_PB_assemblyticsfalcon_5116:HG4_10X_allpass_2422:HG2_PB_HySA_23360:HG2_Ill_tnscope_1426:HG4_PB_pbsv_12836:HG4_PB_SVrefine2PBcRDovetail_6497:HG4_PB_SVrefine2Falcon1Dovetail_7869:HG4_Ill_MetaSV_977:HG2_PB_pbsv_12852:HG2_PB_SVrefine2PBcRplusDovetail_2156:HG2_PB_SVrefine2PB10Xhap12_9271:HG2_PB_SVrefine2Falcon1plusDovetail_2264:HG2_Ill_breakscan11_1844:HG2_Ill_SVrefine2DISCOVARplusDovetail_2502:HG2_Ill_MetaSV_926;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8982:HG4_PB_pbsv_12836:HG4_PB_SVrefine2PBcRDovetail_6497:HG4_PB_SVrefine2Falcon1Dovetail_7869:HG4_Ill_MetaSV_977:HG2_PB_pbsv_12852:HG2_PB_SVrefine2PBcRplusDovetail_2156:HG2_PB_SVrefine2PB10Xhap12_9271:HG2_PB_SVrefine2Falcon1plusDovetail_2264:HG2_Ill_breakscan11_1844:HG2_Ill_SVrefine2DISCOVARplusDovetail_2502:HG2_Ill_MetaSV_926;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00122047;ClusterMaxSizeDiff=0.00122047;ClusterMaxEditDist=0.00122047;PBcalls=10;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-5737;DistBack=5885;DistForward=-5737;DistMin=-5737;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:292229-297967;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:49:0|1:31:1:1:14:1|0:0:13:17:0:0/1:53:17:0/1:366:181:2951:.:.
chr12	301966	HG3_Ill_250bpfermikitraw_16650	GGCATCATTCACATCACAGACGGAGACAGGAGGCGATACAAAGGAAGGGAGGGGCTCGGAAGA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_12539:HG2_PB_assemblyticsfalcon_5117:HG2_PB_pbsv_12853:HG4_PB_assemblyticsfalcon_5017:HG2_PB_HySA_23361:HG4_PB_pbsv_12837:HG4_Ill_Krunchall_17797:HG4_Ill_GATKHCSBGrefine_8845:HG4_Ill_250bpfermikitraw_16988:HG4_Ill_150bpfermikitraw_16336:HG3_Ill_Krunchall_17132:HG3_Ill_250bpfermikitraw_16650:HG2_Ill_250bpfermikitraw_17126;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17126:HG3_Ill_250bpfermikitraw_16650:HG3_Ill_Krunchall_17132:HG4_Ill_150bpfermikitraw_16336:HG4_Ill_250bpfermikitraw_16988:HG4_Ill_GATKHCSBGrefine_8845:HG4_Ill_Krunchall_17797;NumExactMatchSVs=7;ClusterMaxShiftDist=0.048;ClusterMaxSizeDiff=0.048;ClusterMaxEditDist=0.114754;PBcalls=6;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=3998;DistForward=29;DistMin=29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=125;REFWIDENED=12:301967-302153;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=708.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:23:0|1:26:1:0:17:./.:0:3:14:0:0/1:22:12:./.:.:.:2951:.:.
chr12	1028630	HG3_Ill_SVrefine2DISCOVARDovetail_9380	GGCCAGGCTCAGTGGCTCACACCTGTAATCCCAGAACTTTGGGAGGCCAAGGCAGGTGGATTGATCACTTGAGCCCAGGAGTTTGAGACCAGCCTGGCCAACACAGCAAAACCCCGCTCTACTAAAAAATACGAAACATTAGTTGGGTGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCACGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATAGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTAAAAAAAAAAAAAAAAATCTGGGCTCAGCGTGGTGGCTCACGCCTGTAATCCCAACACCTTGGGAGGCCGAGGTGGGCGGATCATCTGAGGTTAAGAGTCCAAGATCAGCCTGACCAACATGGTGAAACCCCCTCTCTACAAAATACAAAAAATTAGCTGGGTGTGGTGGCACACACCTGTAGTCCTAGCTAGTTGGGAGGCTGAGGTAGAAGAATTGCCTGAACCTGGGAGGCAGAGATGGCAGTGAGCCGAGATCACACAATTGCACCCCAGCCTGGGCAACAAGAGCAAAAACTCTGTCTCAAAAAAAAAAAAAATTAGCCGGGCATGGTAGCACGCACCTGTAGTTCCAGCTACTCAGGAGGCTGAGGCAGGAGAACTGCTTGAACCCAGGAGGCAAAGGATGCAGTGAGCCAAGATCGCACCACTGCACTCTAGCCTGGGCGGCAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAATTGTTATAGGAGACGAGAGTATTATATAATGATAAGAATGTCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8996:HG3_10X_allpass_2515:HG4_10X_allpass_2423:HG4_PB_HySA_18682:HG2_10X_allpass_2069:HG4_PB_pbsv_12854:HG3_PB_pbsv_12554:HG2_PB_pbsv_12868:HG3_PB_HySA_19392:HG4_Ill_MetaSV_980:HG4_Ill_GATKHCSBGrefine_8855:HG3_Ill_MetaSV_1019:HG3_Ill_GATKHCSBGrefine_8495:HG2_Ill_MetaSV_928:HG2_Ill_tnscope_1427:HG4_PB_SVrefine2PBcRDovetail_6506:HG3_PB_SVrefine2PBcRDovetail_6070:HG3_Ill_SVrefine2DISCOVARDovetail_9380:HG2_PB_SVrefine2PB10Xhap12_9281:HG2_PB_SVrefine2Falcon2Bionano_6327:HG2_PB_SVrefine2Falcon1plusDovetail_2272:HG2_Ill_SVrefine2DISCOVARplusDovetail_2512;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8996:HG4_PB_SVrefine2PBcRDovetail_6506:HG3_PB_SVrefine2PBcRDovetail_6070:HG3_Ill_SVrefine2DISCOVARDovetail_9380:HG2_PB_SVrefine2PB10Xhap12_9281:HG2_PB_SVrefine2Falcon2Bionano_6327:HG2_PB_SVrefine2Falcon1plusDovetail_2272:HG2_Ill_SVrefine2DISCOVARplusDovetail_2512;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0753994;ClusterMaxSizeDiff=0.0753994;ClusterMaxEditDist=0.103514;PBcalls=10;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-811;DistBack=22551;DistForward=-653;DistMin=-653;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=298;REFWIDENED=12:1028631-1029739;PctSeqSimilarity=0.8893;PctSizeSimilarity=0.9938;PctRecOverlap=0.8091;SizeDiff=5;StartDistance=-155;EndDistance=-150;GTMatch=0;TruScore=89;MatchId=710.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:17:./.:19:16:17:7:./.:57:0:19:7:0/0:63:1:0/1:94:16:.:.:.
chr12	1480620	HG2_10X_SVrefine210Xhap12_9006	GTCTTGGTTTTATTACCCTCAAAATGGGGGTACTGATAATAGTAACTTCAAAGAATTGTTGGAAGGGGTGAATGATGCTGTTGGCGTTTGCTTTCTTGGTTTTATTACCCTCAAAATGGCGGTACTGATAATAGTAACTTCAAAGAATTGTTGGAAGGGGTGAATGATGCTGTTGGCGTTTGCTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9006:HG3_PB_SVrefine2PBcRDovetail_6076:HG3_Ill_GATKHCSBGrefine_8499:HG3_10X_allpass_2517:HG3_PB_pbsv_12564:HG2_PB_pbsv_12884:HG3_Ill_SVrefine2DISCOVARDovetail_9388:HG2_PB_SVrefine2PB10Xhap12_9291:HG2_PB_SVrefine2Falcon2Bionano_6331:HG2_Ill_SVrefine2DISCOVARplusDovetail_2519;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9006:HG3_Ill_SVrefine2DISCOVARDovetail_9388:HG2_PB_SVrefine2PB10Xhap12_9291:HG2_PB_SVrefine2Falcon2Bionano_6331:HG2_Ill_SVrefine2DISCOVARplusDovetail_2519;NumExactMatchSVs=5;ClusterMaxShiftDist=0.00543478;ClusterMaxSizeDiff=0.00542005;ClusterMaxEditDist=0.0217391;PBcalls=5;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-184;DistBack=-93;DistForward=-151;DistMin=-151;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=188;REFWIDENED=12:1480621-1480992;PctSeqSimilarity=0.9868;PctSizeSimilarity=1;PctRecOverlap=0.5946;SizeDiff=0;StartDistance=-75;EndDistance=-75;GTMatch=0;TruScore=86;MatchId=711.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:20:0|1:27:0:0:19:./.:2:5:19:0:0/1:37:8:./.:.:.:.:.:.
chr12	1884112	HG2_10X_SVrefine210Xhap12_9014	GCCCGCCTCGGCCTCCCATAGTGCTGGGATTACAGGCATGTGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCTG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9013:HG4_PB_assemblyticsfalcon_5064:HG4_Ill_Krunchall_17828:HG2_PB_pbsv_12893:HG4_Ill_GATKHCSBGrefine_8862:HG3_Ill_GATKHCSBGrefine_8504:HG2_Ill_GATKHCSBGrefine_8599:HG4_PB_SVrefine2PBcRDovetail_6516:HG4_PB_SVrefine2Falcon1Dovetail_7898:HG4_Ill_SVrefine2DISCOVARDovetail_9166:HG2_Ill_SVrefine2DISCOVARplusDovetail_2520:HG2_10X_SVrefine210Xhap12_9014:HG3_PB_pbsv_12575:HG4_PB_pbsv_12875:HG2_PB_HySA_23420:HG3_PB_SVrefine2PBcRDovetail_6083:HG3_Ill_SVrefine2DISCOVARDovetail_9391:HG2_PB_SVrefine2Falcon1plusDovetail_2287;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9014:HG2_Ill_SVrefine2DISCOVARplusDovetail_2520:HG4_Ill_SVrefine2DISCOVARDovetail_9166:HG4_PB_SVrefine2Falcon1Dovetail_7898:HG4_PB_SVrefine2PBcRDovetail_6516;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0536398;ClusterMaxEditDist=0.0996169;PBcalls=9;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-133;DistBack=-43;DistForward=10530;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=186;REFWIDENED=12:1883972-1884290;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9925;PctRecOverlap=0.9851;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=712.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:24:./.:18:11:14:10:1|0:0:12:18:1:0/1:34:24:./.:.:.:.:.:.
chr12	2995032	HG2_Ill_Krunchall_17519	CGCCCGGCCTACTTTGACTTTTACTCTGTTAGGTTTTCCAGAATGCTGACTCTTCT	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_17172:HG2_PB_HySA_23439:HG2_Ill_Krunchall_17520:HG3_PB_HySA_19439:HG3_PB_pbsv_12590:HG2_PB_pbsv_12906:HG4_PB_assemblyticsfalcon_5078:HG3_PB_assemblyticsfalcon_5191:HG3_Ill_svaba_16180:HG3_Ill_scalpel_12358:HG3_Ill_manta_2917:HG3_Ill_Krunchall_17179:HG3_Ill_GATKHCSBGrefine_8510:HG3_Ill_250bpfermikitraw_16693:HG3_Ill_150bpfermikitraw_16209:HG2_PB_assemblyticsPBcR_5023:HG2_Ill_svaba_16032:HG2_Ill_Krunchall_17519:HG2_Ill_GATKHCSBGrefine_8605;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17172:HG4_PB_assemblyticsfalcon_5078:HG3_PB_assemblyticsfalcon_5191:HG3_Ill_svaba_16180:HG3_Ill_scalpel_12358:HG3_Ill_manta_2917:HG3_Ill_Krunchall_17179:HG3_Ill_GATKHCSBGrefine_8510:HG3_Ill_250bpfermikitraw_16693:HG3_Ill_150bpfermikitraw_16209:HG2_PB_assemblyticsPBcR_5023:HG2_Ill_svaba_16032:HG2_Ill_Krunchall_17519:HG2_Ill_GATKHCSBGrefine_8605;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.218182;PBcalls=7;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=55954;DistForward=8893;DistMin=8893;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=59;REFWIDENED=12:2995033-2995146;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=714.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:19:0|1:15:3:0:24:1|0:0:13:10:1:0/1:23:12:./.:.:.:.:.:.
chr12	3860912	HG2_PB_SVrefine2Falcon1plusDovetail_2301	GTATAGAACCGAGAGGTGACAGGACCTCGGAAGCCGTACCTGAAGCCTCTCACT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9026:HG3_PB_HySA_19455:HG3_PB_pbsv_12597:HG2_PB_pbsv_12911:HG3_PB_SVrefine2PBcRDovetail_6097:HG3_Ill_svaba_16190:HG3_Ill_manta_2920:HG3_Ill_Krunchall_17189:HG3_Ill_GATKHC_20503:HG3_Ill_GATKHCSBGrefine_8513:HG3_Ill_250bpfermikitraw_16701:HG3_Ill_150bpfermikitraw_16217:HG2_PB_SVrefine2PBcRplusDovetail_2194:HG2_PB_SVrefine2Falcon1plusDovetail_2301:HG2_Ill_svaba_16042:HG2_Ill_scalpel_12156:HG2_Ill_manta_3570:HG2_Ill_SVrefine2DISCOVARplusDovetail_2534:HG2_Ill_Krunchall_17531:HG2_Ill_GATKHC_20641:HG2_Ill_GATKHCSBGrefine_8607:HG2_Ill_250bpfermikitraw_17182:HG2_Ill_150bpfermikitraw_16182;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9026:HG3_PB_SVrefine2PBcRDovetail_6097:HG3_Ill_svaba_16190:HG3_Ill_manta_2920:HG3_Ill_Krunchall_17189:HG3_Ill_GATKHC_20503:HG3_Ill_GATKHCSBGrefine_8513:HG3_Ill_250bpfermikitraw_16701:HG3_Ill_150bpfermikitraw_16217:HG2_PB_SVrefine2PBcRplusDovetail_2194:HG2_PB_SVrefine2Falcon1plusDovetail_2301:HG2_Ill_svaba_16042:HG2_Ill_scalpel_12156:HG2_Ill_manta_3570:HG2_Ill_SVrefine2DISCOVARplusDovetail_2534:HG2_Ill_Krunchall_17531:HG2_Ill_GATKHC_20641:HG2_Ill_GATKHCSBGrefine_8607:HG2_Ill_250bpfermikitraw_17182:HG2_Ill_150bpfermikitraw_16182;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0961538;PBcalls=6;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-53;DistBack=5918;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=56;REFWIDENED=12:3860913-3861021;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=715.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:26:0|1:38:3:4:23:1|0:0:17:13:0:0/1:32:19:./.:.:.:.:.:.
chr12	5321218	HG2_Ill_svaba_16051	GAGAGAGAGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAAGAAAGAAAGGAAGGAAGAAAGAAAGAAAGAGGAAAGAAAGAGAGAAAGGGAGAAAGGGGGAAGGAAAGAAGGAAGGAAGGAAAGAGAAAGAAAGAA	G	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_9413:HG2_PB_assemblyticsfalcon_5196:HG2_PB_assemblyticsPBcR_5041:HG4_Ill_SVrefine2DISCOVARDovetail_9179:HG2_PB_SVrefine2Falcon1plusDovetail_2308:HG3_Ill_GATKHCSBGrefine_8519:HG2_PB_SVrefine2PBcRplusDovetail_2199:HG2_PB_SVrefine2PB10Xhap12_9319:HG2_PB_SVrefine2Falcon2Bionano_6354:HG2_Ill_GATKHC_20652:HG2_Ill_GATKHCSBGrefine_8612:HG2_10X_SVrefine210Xhap12_9037:HG2_PB_HySA_23473:HG4_PB_pbsv_12902:HG4_Ill_svaba_16101:HG4_Ill_manta_3038:HG4_Ill_GATKHCSBGrefine_8875:HG4_10X_allpass_2427:HG2_Ill_svaba_16051:HG2_Ill_manta_3572:HG2_Ill_GATKHC_20651:HG2_Ill_GATKHCSBGrefine_8611:HG4_PB_HySA_18762:HG3_Ill_MetaSV_1033:HG2_PB_pbsv_12920:HG3_PB_HySA_19467:HG3_PB_pbsv_12606:HG4_Ill_scalpel_11873:HG3_Ill_manta_2922:HG3_Ill_GATKHC_20522:HG3_Ill_GATKHCSBGrefine_8518:HG2_Ill_SVrefine2DISCOVARplusDovetail_2540:HG2_10X_SVrefine210Xhap12_9036:HG4_PB_SVrefine2Falcon1Dovetail_7916;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8611:HG2_Ill_GATKHC_20651:HG2_Ill_manta_3572:HG2_Ill_svaba_16051:HG4_10X_allpass_2427:HG4_Ill_GATKHCSBGrefine_8875:HG4_Ill_manta_3038:HG4_Ill_svaba_16101;NumExactMatchSVs=8;ClusterMaxShiftDist=0.155844;ClusterMaxSizeDiff=0.155844;ClusterMaxEditDist=0.170068;PBcalls=13;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-146;DistBack=68604;DistForward=-143;DistMin=-143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=210;REFWIDENED=12:5321082-5321437;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=716.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:61:1/1:0:31:3:26:./.:17:1:1:20:0/1:11:17:./.:.:.:.:.:.
chr12	6037571	HG2_Ill_manta_3574	CTCACTAGTCTACTTTCCTTCCTCACTAGTCTACTTTCCTTCCTCCGTAGTCTACTTTCCTTCG	C	20	PASS	ClusterIDs=HG2_PB_pbsv_12927:HG4_PB_HySA_18776:HG3_PB_HySA_19472:HG4_PB_pbsv_12910:HG4_Ill_svaba_16108:HG4_Ill_manta_3039:HG4_Ill_Krunchall_17862:HG4_Ill_250bpfermikitraw_17046:HG4_Ill_150bpfermikitraw_16394:HG3_PB_pbsv_12613:HG3_Ill_svaba_16203:HG3_Ill_Krunchall_17209:HG3_Ill_250bpfermikitraw_16721:HG3_Ill_150bpfermikitraw_16237:HG2_Ill_svaba_16055:HG2_Ill_manta_3574:HG2_Ill_Krunchall_17545:HG2_Ill_250bpfermikitraw_17197:HG2_Ill_150bpfermikitraw_16200;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16200:HG2_Ill_250bpfermikitraw_17197:HG2_Ill_Krunchall_17545:HG2_Ill_manta_3574:HG2_Ill_svaba_16055:HG3_Ill_150bpfermikitraw_16237:HG3_Ill_250bpfermikitraw_16721:HG3_Ill_Krunchall_17209:HG3_Ill_svaba_16203:HG3_PB_pbsv_12613:HG4_Ill_150bpfermikitraw_16394:HG4_Ill_250bpfermikitraw_17046:HG4_Ill_Krunchall_17862:HG4_Ill_manta_3039:HG4_Ill_svaba_16108:HG4_PB_pbsv_12910;NumExactMatchSVs=16;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.046875;PBcalls=5;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-63;DistBack=-4351;DistForward=-30;DistMin=-4351;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1725;REFWIDENED=12:6037555-6039342;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=717.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:32:./.:0:0:0:0:./.:0:0:0:0:1/1:0:30:./.:.:.:.:2963:.
chr12	7822614	HG2_PB_SVrefine2PBcRplusDovetail_2223	TTGTTGCCCAGGTTGGAGTACAATGGCCCCATCTTGGCTCACTGCAACCTCCTCCTCCCGGGTTCAGGTGATTCTCTTGTCACAGTCTCCCGAGTAGCTGGGATTACAGGCGTGTGCCACCATGCCTGGCTGATTTTTGCATTTTTAGTAGAGATGGGGTTTCATCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCCCAGCCTCCCAAAGTGCTGGGATTACCAGGTGTGAGCCACCACACCTGGCCTTGTCCATTTTTTAATTGGGTTCTTTGTCTCATTACTGAGTTGTAAGAGTTTTTTACGTATTGTGGATACAAGCTTTGTCATATCTGTATACAAATGCTCCTCAGTTTACAATGAAGTCATGTCTCCATAATCCCATCATAATTGCAAAATATTGTTAAGTTGAAAATTCATTTAATACACCTAACCTGGCCGGGTGCAGTGGCTCATACCTGCAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCGCCTGAGGTCAGGAGTTCGAGACCAGTCTGACCAACATGGAGAAACCCCACCTCTACTAAAAATACAAAATTAGCCGGGTGTGGTGGCACATGCCTGTAATCCCAGCTACTCCAGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGTGGTGAGCCGAGATCGTGCCATTGCACTCCAGCCTGGGCAAGAAGAGCAAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAAATACACCTAACCTACCAAACATCATAGCCTAGCCTACCTTAAACATGCTGAGAACACTTATATTAGCCTACACTTAGGCAAAATCATCCAACACAAGACTATTTTTAAATGAAGTGCTTAACATTTCATTCAATTTATTGAATACTGCACTTAACAGGAAAAATCGAATGGCTGTATGGGTACTTGAAATACAATTTCTACTGAATGCATATCACCTGTACACCATTGTAAAACTGAAAAATTCTAAGTCATGCCATCATTAAACTGGGGACTGTCTGTATATATTTCCCTTAGTCTCTGGTTTGCTTTTTATTTTCCTTAATGGTGTCTTTTGAAGAGCAGAAGTTTAATGAAGTTTTAGTAAAGTTCAGTTTATATCGATTGGATTACTTTTTATGGTTAGTGCTTTTTGTCTATGAAATCATTGTCTACTCAAAAGGCACAAAGCTATTCTCCTATATTTTCTTCTGGTACTTATATATTTTTAGTTTTAGCTTTTACAATAAACCTATGATACATTTCGAGTTATTTTTGTATATGGTGTGATGTCAGGGTCAGGATTCTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTTTCACCCAGGCTGGAGTGCATTGTCGAAATCTCGGCTCACTGCAACCTCTGCCTCTTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGGAGCTGGGAATACAGGTGTGCAGCATCATGCCCAGATAATTTTTTTTTGTACTTTTAGTAGAGATGGGATTTCACCACGTTGGTCAGGGTGGTCTCAAACTCCTGACCTCAAGTGATCCACCCTCCATGGCCTCCAAAAGTGCTGAGATTACAGGCATGAGCCACTGCACCTGGCCAGTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6378:HG2_10X_allpass_2072:HG2_Ill_tnscope_1433:HG4_PB_pbsv_12938:HG2_Ill_MetaSV_949:HG4_Ill_MetaSV_996:HG2_PB_HySA_23527:HG2_PB_pbsv_12954:HG2_PB_SVrefine2Falcon1plusDovetail_2330:HG4_PB_SVrefine2PBcRDovetail_6554:HG4_PB_SVrefine2Falcon1Dovetail_7945:HG4_Ill_SVrefine2DISCOVARDovetail_9198:HG2_PB_SVrefine2PBcRplusDovetail_2223:HG2_PB_SVrefine2PB10Xhap12_9346;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_6378:HG4_PB_SVrefine2PBcRDovetail_6554:HG4_PB_SVrefine2Falcon1Dovetail_7945:HG4_Ill_SVrefine2DISCOVARDovetail_9198:HG2_PB_SVrefine2PBcRplusDovetail_2223:HG2_PB_SVrefine2PB10Xhap12_9346;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0448378;ClusterMaxSizeDiff=0.0448378;ClusterMaxEditDist=0.0448378;PBcalls=9;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-1678;DistBack=9605;DistForward=-1647;DistMin=-1647;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=255;REFWIDENED=12:7822615-7824547;PctSeqSimilarity=0.9625;PctSizeSimilarity=1;PctRecOverlap=0.9827;SizeDiff=0;StartDistance=-29;EndDistance=-29;GTMatch=0;TruScore=98;MatchId=719.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:19:0|1:34:2:5:18:./.:3:14:50:0:0/1:42:11:0/1:148:65:1537:.:.
chr12	7968662	HG3_Ill_manta_2928	AATTTCTTGAATTTTTATTTTTTATTTTTTTTATTTTTTTTATTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCTCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9062:HG3_Ill_Krunchall_17231:HG4_Ill_Krunchall_17886:HG3_Ill_Krunchall_17230:HG4_PB_SVrefine2PBcRDovetail_6556:HG2_PB_HySA_23531:HG4_PB_pbsv_12940:HG4_Ill_manta_3042:HG4_Ill_GATKHCSBGrefine_8896:HG4_10X_allpass_2431:HG3_PB_pbsv_12644:HG3_Ill_manta_2928:HG3_Ill_GATKHCSBGrefine_8535:HG3_10X_allpass_2525:HG2_PB_pbsv_12957:HG2_Ill_manta_3580:HG2_Ill_SpiralSDKrefine_3304:HG2_Ill_GATKHCSBGrefine_8633:HG2_10X_allpass_2074:HG4_Ill_MetaSV_999:HG3_Ill_MetaSV_1046:HG2_Ill_tnscope_1434:HG2_Ill_MetaSV_951:HG4_PB_SVrefine2Falcon1Dovetail_7948:HG2_PB_SVrefine2Falcon1plusDovetail_2332;NumClusterSVs=25;ExactMatchIDs=HG2_10X_allpass_2074:HG2_Ill_GATKHCSBGrefine_8633:HG2_Ill_SpiralSDKrefine_3304:HG2_Ill_manta_3580:HG2_PB_pbsv_12957:HG3_10X_allpass_2525:HG3_Ill_GATKHCSBGrefine_8535:HG3_Ill_manta_2928:HG3_PB_pbsv_12644:HG4_10X_allpass_2431:HG4_Ill_GATKHCSBGrefine_8896:HG4_Ill_manta_3042;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0299401;ClusterMaxSizeDiff=0.0299401;ClusterMaxEditDist=0.0628743;PBcalls=7;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=15228;DistForward=-323;DistMin=-323;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:7968663-7969015;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:./.:17:14:9:10:1|0:0:23:44:0:0/1:46:9:0/1:24:8:.:.:.
chr12	8132195	HG4_Ill_SVrefine2DISCOVARDovetail_9201	TTAGCGGGGCGTTGTGGTGGGCGCCTGTAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGAATGGGGTGAACACGGGAGGTGGAGCTTGCAGTGAGCCGAGATGGCGCCAGTGCATTCCAGCCGGGGCGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAATCAGAAAAGAGCATTTCGGGTGGGCGTGGTGGCTCACGCCTTTAATCCCAGCACTTTGGGATGCCAAGGCAGGCAGATGACCTGAGGTCAGGGGTTCGAGACCAGCATGGCCAACATGGGGAAACATGTCTCTACTAAAAATACAAAAATTAGCCGGACGTGGAGGCACACACCTGTAATCCCAGCAACTGGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATCACGCCATTGCACTCCAGCCTGGACAACAAGAGCTGAAACTCCATCTCAGGGGAAAAAAAAAAAAAAAAGAGCATTTCAGTAAAGTGGAATGGCCTGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9063:HG2_PB_pbsv_12959:HG4_PB_pbsv_12944:HG3_PB_pbsv_12646:HG4_Ill_MetaSV_1000:HG3_Ill_MetaSV_1047:HG4_PB_HySA_18815:HG3_PB_HySA_19514:HG2_PB_HySA_23534:HG4_PB_SVrefine2PBcRDovetail_6557:HG4_PB_SVrefine2Falcon1Dovetail_7949:HG4_Ill_SVrefine2DISCOVARDovetail_9201:HG3_Ill_SVrefine2DISCOVARDovetail_9440:HG2_PB_SVrefine2PBcRplusDovetail_2226:HG2_PB_SVrefine2PB10Xhap12_9349:HG2_PB_SVrefine2Falcon2Bionano_6380:HG2_PB_SVrefine2Falcon1plusDovetail_2333:HG2_Ill_SVrefine2DISCOVARplusDovetail_2566;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9063:HG4_PB_SVrefine2PBcRDovetail_6557:HG4_PB_SVrefine2Falcon1Dovetail_7949:HG4_Ill_SVrefine2DISCOVARDovetail_9201:HG3_Ill_SVrefine2DISCOVARDovetail_9440:HG2_PB_SVrefine2PBcRplusDovetail_2226:HG2_PB_SVrefine2PB10Xhap12_9349:HG2_PB_SVrefine2Falcon2Bionano_6380:HG2_PB_SVrefine2Falcon1plusDovetail_2333:HG2_Ill_SVrefine2DISCOVARplusDovetail_2566;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00970874;ClusterMaxSizeDiff=0.00968054;ClusterMaxEditDist=0.015534;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-518;DistBack=21907;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=519;REFWIDENED=12:8132196-8133232;PctSeqSimilarity=0.99;PctSizeSimilarity=0.9981;PctRecOverlap=0.7129;SizeDiff=1;StartDistance=-149;EndDistance=-148;GTMatch=0;TruScore=90;MatchId=721.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:37:1/1:0:14:0:15:./.:3:0:3:0:0/0:8:0:0/1:6:6:.:.:.
chr12	8625578	HG3_Ill_SVrefine2DISCOVARDovetail_9443	TAGCTCCTACTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1851:HG3_Ill_Krunchall_17243:HG2_Ill_Krunchall_17578:HG3_PB_pbsv_12652:HG3_PB_HySA_19520:HG2_PB_HySA_23538:HG3_Ill_MetaSV_1050:HG2_Ill_tnscope_1436:HG2_Ill_MetaSV_954:HG3_PB_SVrefine2PBcRDovetail_6102:HG3_Ill_scalpel_12410:HG3_Ill_manta_2929:HG3_Ill_SVrefine2DISCOVARDovetail_9443:HG3_Ill_GATKHCSBGrefine_8540:HG3_10X_allpass_2527:HG2_PB_pbsv_12966:HG2_PB_SVrefine2PB10Xhap12_9354:HG2_PB_SVrefine2Falcon2Bionano_6383:HG2_PB_SVrefine2Falcon1plusDovetail_2339:HG2_Ill_scalpel_12186:HG2_Ill_SpiralSDKrefine_3310:HG2_Ill_GATKHCSBGrefine_8640:HG2_10X_SVrefine210Xhap12_9067;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9067:HG2_Ill_GATKHCSBGrefine_8640:HG2_Ill_SpiralSDKrefine_3310:HG2_Ill_scalpel_12186:HG2_PB_SVrefine2Falcon1plusDovetail_2339:HG2_PB_SVrefine2Falcon2Bionano_6383:HG2_PB_SVrefine2PB10Xhap12_9354:HG2_PB_pbsv_12966:HG3_10X_allpass_2527:HG3_Ill_GATKHCSBGrefine_8540:HG3_Ill_SVrefine2DISCOVARDovetail_9443:HG3_Ill_manta_2929:HG3_Ill_scalpel_12410:HG3_PB_SVrefine2PBcRDovetail_6102;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00641026;ClusterMaxSizeDiff=0.00641026;ClusterMaxEditDist=0.00643087;PBcalls=8;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=-308;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=12:8625579-8625903;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=722.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:0|1:28:2:2:34:0|1:68:0:0:37:0/1:23:18:0/1:22:12:.:.:.
chr12	10678740	HG4_Ill_150bpfermikitraw_16455	CACATATATATATATATATATATATATATATATATATATATATATATATATA	C	20	PASS	ClusterIDs=HG4_Ill_svaba_16169:HG4_PB_assemblyticsfalcon_5180:HG4_PB_HySA_18862:HG3_PB_assemblyticsfalcon_5286:HG2_PB_assemblyticsPBcR_5113:HG4_PB_HySA_18861:HG4_Ill_svaba_16170:HG4_Ill_manta_3045:HG4_Ill_Krunchall_17922:HG4_Ill_GATKHC_20732:HG4_Ill_GATKHCSBGrefine_8915:HG4_Ill_FB_11172:HG4_Ill_250bpfermikitraw_17119:HG4_Ill_150bpfermikitraw_16455:HG3_Ill_svaba_16253:HG3_Ill_manta_2931:HG3_Ill_Krunchall_17266:HG3_Ill_GATKHC_20599:HG3_Ill_GATKHCSBGrefine_8553:HG3_Ill_250bpfermikitraw_16781:HG3_Ill_150bpfermikitraw_16288:HG2_Ill_svaba_16110:HG2_Ill_manta_3586:HG2_Ill_Krunchall_17601:HG2_Ill_GATKHC_20729:HG2_Ill_GATKHCSBGrefine_8653:HG2_Ill_250bpfermikitraw_17269:HG2_Ill_150bpfermikitraw_16262;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16262:HG2_Ill_250bpfermikitraw_17269:HG2_Ill_GATKHCSBGrefine_8653:HG2_Ill_GATKHC_20729:HG2_Ill_Krunchall_17601:HG2_Ill_manta_3586:HG2_Ill_svaba_16110:HG3_Ill_150bpfermikitraw_16288:HG3_Ill_250bpfermikitraw_16781:HG3_Ill_GATKHCSBGrefine_8553:HG3_Ill_GATKHC_20599:HG3_Ill_Krunchall_17266:HG3_Ill_manta_2931:HG3_Ill_svaba_16253:HG4_Ill_150bpfermikitraw_16455:HG4_Ill_250bpfermikitraw_17119:HG4_Ill_FB_11172:HG4_Ill_GATKHCSBGrefine_8915:HG4_Ill_GATKHC_20732:HG4_Ill_Krunchall_17922:HG4_Ill_manta_3045:HG4_Ill_svaba_16170;NumExactMatchSVs=22;ClusterMaxShiftDist=0.16;ClusterMaxSizeDiff=0.16;ClusterMaxEditDist=0.16;PBcalls=5;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=-51;DistBack=17632;DistForward=33519;DistMin=17632;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=12:10678739-10678793;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=723.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:48:./.:25:20:7:11:./.:11:0:3:34:0/1:19:20:./.:.:.:.:.:.
chr12	10741654	HG2_PB_pbsv_12987	GGAATGATTTATCCTATTGATAAGAAAAAAGACCCAGGATATAATATCAGAGTTCTCTAACTGGTTGTATAGGTAGTTCTGAGAATTA	G	20	PASS	ClusterIDs=HG3_PB_HySA_19539:HG4_PB_pbsv_12974:HG3_PB_assemblyticsfalcon_5287:HG4_Ill_svaba_16171:HG4_Ill_manta_3046:HG4_Ill_Krunchall_17923:HG4_Ill_GATKHC_20733:HG4_Ill_GATKHCSBGrefine_8916:HG4_Ill_Cortex_713:HG4_Ill_250bpfermikitraw_17120:HG4_Ill_150bpfermikitraw_16456:HG4_CG_vcfBeta_8235:HG4_10X_allpass_2435:HG3_PB_pbsv_12674:HG3_PB_SVrefine2PBcRDovetail_6110:HG3_Ill_svaba_16254:HG3_Ill_manta_2932:HG3_Ill_Krunchall_17267:HG3_Ill_GATKHC_20600:HG3_Ill_GATKHCSBGrefine_8554:HG3_Ill_Cortex_749:HG3_Ill_250bpfermikitraw_16782:HG3_Ill_150bpfermikitraw_16289:HG3_CG_vcfBeta_7003:HG3_10X_allpass_2531:HG2_PB_pbsv_12987:HG2_PB_SVrefine2Falcon2Bionano_6390:HG2_Ill_svaba_16111:HG2_Ill_manta_3587:HG2_Ill_breakscan11_1855:HG2_Ill_SpiralSDKrefine_3330:HG2_Ill_SVrefine2DISCOVARplusDovetail_2580:HG2_Ill_Krunchall_17602:HG2_Ill_GATKHC_20730:HG2_Ill_GATKHCSBGrefine_8654:HG2_Ill_Cortex_1733:HG2_Ill_250bpfermikitraw_17270:HG2_Ill_150bpfermikitraw_16263:HG2_CG_vcfBeta_7358:HG2_10X_SVrefine210Xhap12_9080;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9080:HG2_CG_vcfBeta_7358:HG2_Ill_150bpfermikitraw_16263:HG2_Ill_250bpfermikitraw_17270:HG2_Ill_Cortex_1733:HG2_Ill_GATKHCSBGrefine_8654:HG2_Ill_GATKHC_20730:HG2_Ill_Krunchall_17602:HG2_Ill_SVrefine2DISCOVARplusDovetail_2580:HG2_Ill_SpiralSDKrefine_3330:HG2_Ill_breakscan11_1855:HG2_Ill_manta_3587:HG2_Ill_svaba_16111:HG2_PB_SVrefine2Falcon2Bionano_6390:HG2_PB_pbsv_12987:HG3_10X_allpass_2531:HG3_CG_vcfBeta_7003:HG3_Ill_150bpfermikitraw_16289:HG3_Ill_250bpfermikitraw_16782:HG3_Ill_Cortex_749:HG3_Ill_GATKHCSBGrefine_8554:HG3_Ill_GATKHC_20600:HG3_Ill_Krunchall_17267:HG3_Ill_manta_2932:HG3_Ill_svaba_16254:HG3_PB_SVrefine2PBcRDovetail_6110:HG3_PB_pbsv_12674:HG4_10X_allpass_2435:HG4_CG_vcfBeta_8235:HG4_Ill_150bpfermikitraw_16456:HG4_Ill_250bpfermikitraw_17120:HG4_Ill_Cortex_713:HG4_Ill_GATKHCSBGrefine_8916:HG4_Ill_GATKHC_20733:HG4_Ill_Krunchall_17923:HG4_Ill_manta_3046:HG4_Ill_svaba_16171;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0342857;ClusterMaxSizeDiff=0.0342857;ClusterMaxEditDist=0.0344828;PBcalls=7;Illcalls=27;TenXcalls=3;CGcalls=3;PBexactcalls=4;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=3;HG2count=15;HG3count=14;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-87;DistBack=9360;DistForward=40889;DistMin=9360;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:10741655-10741744;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=724.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:1|0:5:24:20:1:0|1:44:1:0:23:0/1:41:23:./.:.:.:.:.:.
chr12	10813066	HG4_Ill_SVrefine2DISCOVARDovetail_9215	GGGAAATATGTTAGAGGCATTTGAACCAAGGCAGCTCCATCTTGAATAGCAACTGGGTAAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTCTTAGTTACAGAGTGAGATGGGAGGTCAGCCCAAGATACAGGTCACAGTGACATTTCTGATAAAACA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_12675:HG2_PB_HySA_23568:HG3_PB_HySA_19541:HG4_Ill_Krunchall_17925:HG3_Ill_Krunchall_17269:HG2_Ill_Krunchall_17604:HG4_PB_assemblyticsfalcon_5182:HG3_PB_assemblyticsfalcon_5289:HG2_PB_assemblyticsfalcon_5276:HG2_PB_assemblyticsPBcR_5115:HG4_Ill_svaba_16172:HG4_Ill_manta_3047:HG4_Ill_SVrefine2DISCOVARDovetail_9215:HG4_Ill_GATKHCSBGrefine_8917:HG4_10X_allpass_2436:HG3_PB_SVrefine2PBcRDovetail_6111:HG3_Ill_svaba_16255:HG3_Ill_MetaSV_1059:HG3_Ill_GATKHCSBGrefine_8555:HG2_PB_SVrefine2PBcRplusDovetail_2235:HG2_PB_SVrefine2PB10Xhap12_9366:HG2_PB_SVrefine2Falcon2Bionano_6391:HG2_PB_SVrefine2Falcon1plusDovetail_2346:HG2_Ill_svaba_16112:HG2_Ill_GATKHCSBGrefine_8655:HG2_10X_SVrefine210Xhap12_9081:HG2_PB_pbsv_12988:HG4_PB_pbsv_12975;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9081:HG2_Ill_GATKHCSBGrefine_8655:HG2_Ill_svaba_16112:HG2_PB_SVrefine2Falcon1plusDovetail_2346:HG2_PB_SVrefine2Falcon2Bionano_6391:HG2_PB_SVrefine2PB10Xhap12_9366:HG2_PB_SVrefine2PBcRplusDovetail_2235:HG3_Ill_GATKHCSBGrefine_8555:HG3_Ill_MetaSV_1059:HG3_Ill_svaba_16255:HG3_PB_SVrefine2PBcRDovetail_6111:HG4_10X_allpass_2436:HG4_Ill_GATKHCSBGrefine_8917:HG4_Ill_SVrefine2DISCOVARDovetail_9215:HG4_Ill_manta_3047:HG4_Ill_svaba_16172;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0114943;ClusterMaxSizeDiff=0.0114943;ClusterMaxEditDist=0.0229885;PBcalls=14;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-173;DistBack=30385;DistForward=7898;DistMin=7898;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=12:10813067-10813240;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=725.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:49:0|1:21:0:1:50:0|1:54:1:0:33:0/1:34:21:./.:.:.:.:.:.
chr12	11035044	HG3_Ill_GATKHCSBGrefine_8557	CTGTTGGGGTGGTCCTTGTGGCTTTCCCTGAGGAGGTGGTGGACCTTGTTGCTGCTGGCCTCCT	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_17274:HG4_PB_assemblyticsfalcon_5186:HG3_PB_assemblyticsfalcon_5295:HG2_PB_assemblyticsPBcR_5119:HG3_PB_pbsv_12677:HG4_PB_pbsv_12977:HG2_PB_pbsv_12990:HG4_Ill_GATKHCSBGrefine_8919:HG4_Ill_250bpfermikitraw_17125:HG3_Ill_GATKHCSBGrefine_8557:HG3_Ill_250bpfermikitraw_16786:HG3_10X_allpass_2532:HG2_Ill_SpiralSDKrefine_3333:HG2_Ill_GATKHCSBGrefine_8657;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17274:HG4_Ill_GATKHCSBGrefine_8919:HG4_Ill_250bpfermikitraw_17125:HG3_Ill_GATKHCSBGrefine_8557:HG3_Ill_250bpfermikitraw_16786:HG3_10X_allpass_2532:HG2_Ill_SpiralSDKrefine_3333:HG2_Ill_GATKHCSBGrefine_8657;NumExactMatchSVs=8;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.048;PBcalls=6;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-63;DistBack=-77;DistForward=19312;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=190;REFWIDENED=12:11034932-11035184;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=726.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:66:1/1:2:26:3:42:./.:0:3:1:4:1/1:0:16:./.:.:.:.:.:.
chr12	11068047	HG2_Ill_SVrefine2DISCOVARplusDovetail_2584	TGTATGTGAAGCTGACAGGAATTAAGTAGACTAAAAAATTGAGTTTCTTAAAAAATTGTGCTTCTGAAAGAAATGCCAACCCAAACTAGGTCACACGTGTCAAAGTATATTAAAATGGAGGCCAGGTCTGAAGAATCCCTAGGCAGACAAAGCCAGTTAGGTCTCATATGACCTTAAAACTGATTGATTTACAAAAGTAAGCAAAAATTAACTTGAGCTATTTTTTATAAATGCCTATAGTAAAGAAAAACAG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_17608:HG4_Ill_GATKHCSBGrefine_8920:HG3_Ill_GATKHCSBGrefine_8558:HG2_Ill_GATKHCSBGrefine_8658:HG2_Ill_breakscan11_1856:HG2_Ill_SpiralSDKrefine_3334:HG4_Ill_manta_3049:HG4_Ill_Cortex_714:HG3_PB_SVrefine2PBcRDovetail_6112:HG3_Ill_manta_2934:HG3_Ill_Cortex_750:HG2_PB_SVrefine2Falcon2Bionano_6393:HG2_Ill_SVrefine2DISCOVARplusDovetail_2584:HG2_Ill_Cortex_1734:HG3_Ill_MetaSV_1060:HG4_Ill_Spiral_1022:HG3_Ill_Spiral_13474:HG2_Ill_Spiral_883:HG4_Ill_scalpel_11925:HG3_Ill_scalpel_12429:HG3_10X_allpass_2533:HG2_Ill_scalpel_12211:HG4_PB_assemblyticsfalcon_5187:HG3_PB_assemblyticsfalcon_5296:HG2_PB_assemblyticsfalcon_5281:HG4_PB_pbsv_12978:HG3_PB_pbsv_12678:HG3_Ill_Krunchall_17272:HG2_PB_pbsv_12991;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_Cortex_1734:HG2_Ill_SVrefine2DISCOVARplusDovetail_2584:HG2_PB_SVrefine2Falcon2Bionano_6393:HG3_Ill_Cortex_750:HG3_Ill_manta_2934:HG3_PB_SVrefine2PBcRDovetail_6112:HG4_Ill_Cortex_714:HG4_Ill_manta_3049;NumExactMatchSVs=8;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.019802;PBcalls=8;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-252;DistBack=11504;DistForward=55642;DistMin=11504;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=12:11068047-11068299;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.996;PctRecOverlap=0.9921;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=727.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:31:0|1:45:0:0:33:1|0:0:27:73:0:0/1:63:26:./.:.:.:.:.:.
chr12	11341898	HG2_PB_SVrefine2PBcRplusDovetail_2242	CAAACTGGGAATCAAATGAAATACTCTATTTTCTGATGAAAAGTATTAAAAAAAAAACCTAGAGCAAATATTATAGCTATCGATGATGTACTGAAATCCTTCTCCCTGAGTTTAGGACCAAGTCAGTGATAACCATCTTACTAGGTCTATTTTTTTTAAGTTGTCTATTGATCAAAGTAAGGCAAGAAAAATATATTTTAAGAAATTATAGGCTGGACATGATGGCTCACCCGTGTAATCCCAGCACACTGGGAGGCCAAGGCAGGAGGATCACTTGAGCCCAGAAGTTCAAGACTAGCCTGGGCAACATAGTTA	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_17616:HG2_PB_SVrefine2PB10Xhap12_9374:HG2_PB_assemblyticsfalcon_5287:HG2_PB_assemblyticsPBcR_5124:HG2_PB_PB10Xdip_6471:HG4_Ill_Spiral_1024:HG2_Ill_Spiral_885:HG2_Ill_MetaSV_965:HG4_PB_pbsv_12986:HG4_PB_assemblyticsfalcon_5192:HG4_Ill_manta_3052:HG4_Ill_GATKHCSBGrefine_8926:HG4_10X_allpass_2439:HG3_PB_SVrefine2Falcon1Dovetail_7880:HG2_PB_pbsv_12998:HG2_PB_SVrefine2PBcRplusDovetail_2242:HG2_PB_SVrefine2PB10Xhap12_9373:HG2_PB_SVrefine2Falcon1plusDovetail_2352:HG2_Ill_manta_3592:HG2_Ill_SVrefine2DISCOVARplusDovetail_2591:HG2_Ill_GATKHCSBGrefine_8666:HG2_10X_allpass_2083:HG2_10X_SVrefine210Xhap12_9086:HG4_Ill_Krunchall_17935;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9086:HG2_10X_allpass_2083:HG2_Ill_GATKHCSBGrefine_8666:HG2_Ill_SVrefine2DISCOVARplusDovetail_2591:HG2_Ill_manta_3592:HG2_PB_SVrefine2Falcon1plusDovetail_2352:HG2_PB_SVrefine2PB10Xhap12_9373:HG2_PB_SVrefine2PBcRplusDovetail_2242:HG2_PB_pbsv_12998:HG3_PB_SVrefine2Falcon1Dovetail_7880:HG4_10X_allpass_2439:HG4_Ill_GATKHCSBGrefine_8926:HG4_Ill_manta_3052:HG4_PB_assemblyticsfalcon_5192:HG4_PB_pbsv_12986;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0510367;ClusterMaxSizeDiff=0.0510367;ClusterMaxEditDist=0.0510367;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=20894;DistForward=-132;DistMin=-132;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:11341899-11342215;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=728.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:34:./.:15:19:13:11:0|1:57:0:1:26:0/1:50:19:0/1:32:10:.:.:.
chr12	12263338	HG2_Ill_manta_3594	ACATAATTTAAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9090:HG2_PB_assemblyticsfalcon_5295:HG4_Ill_Krunchall_17942:HG2_PB_pbsv_13003:HG4_PB_pbsv_12993:HG4_Ill_MetaSV_1014:HG4_PB_assemblyticsfalcon_5199:HG4_Ill_scalpel_11933:HG4_Ill_manta_3054:HG4_Ill_GATKHCSBGrefine_8933:HG2_PB_SVrefine2Falcon1plusDovetail_2356:HG2_Ill_scalpel_12217:HG2_Ill_manta_3594:HG2_Ill_breakscan11_1858:HG2_Ill_GATKHCSBGrefine_8673:HG2_10X_allpass_2085:HG2_PB_SVrefine2PB10Xhap12_9379;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_2085:HG2_Ill_GATKHCSBGrefine_8673:HG2_Ill_breakscan11_1858:HG2_Ill_manta_3594:HG2_Ill_scalpel_12217:HG2_PB_SVrefine2Falcon1plusDovetail_2356:HG4_Ill_GATKHCSBGrefine_8933:HG4_Ill_manta_3054:HG4_Ill_scalpel_11933:HG4_PB_assemblyticsfalcon_5199;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0326409;ClusterMaxSizeDiff=0.0237389;ClusterMaxEditDist=0.189911;PBcalls=6;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=42016;DistForward=-319;DistMin=-319;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=327;REFWIDENED=12:12263028-12263687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:27:0|1:56:1:0:24:0|1:35:0:0:15:0/1:19:25:0/1:30:7:.:.:.
chr12	13017634	HG2_10X_allpass_2087	TAAGGAATGAGACTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAACTACAAAAAATAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCTAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1859:HG2_PB_assemblyticsPBcR_5136:HG2_PB_HySA_23587:HG2_Ill_Krunchall_17627:HG3_PB_pbsv_12693:HG2_Ill_tnscope_1441:HG3_Ill_GATKHCSBGrefine_8571:HG3_10X_allpass_2538:HG2_PB_pbsv_13007:HG2_PB_SVrefine2PBcRplusDovetail_2249:HG2_Ill_SpiralSDKrefine_3339:HG2_Ill_SVrefine2DISCOVARplusDovetail_2596:HG2_Ill_MetaSV_967:HG2_Ill_GATKHCSBGrefine_8674:HG2_10X_allpass_2087:HG2_10X_SVrefine210Xhap12_9094;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9094:HG2_10X_allpass_2087:HG2_Ill_GATKHCSBGrefine_8674:HG2_Ill_MetaSV_967:HG2_Ill_SVrefine2DISCOVARplusDovetail_2596:HG2_Ill_SpiralSDKrefine_3339:HG2_PB_SVrefine2PBcRplusDovetail_2249:HG2_PB_pbsv_13007:HG3_10X_allpass_2538:HG3_Ill_GATKHCSBGrefine_8571;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0875203;ClusterMaxSizeDiff=0.0875203;ClusterMaxEditDist=0.0875203;PBcalls=5;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=23531;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=871;REFWIDENED=12:13007898-13017948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=730.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:24:./.:16:12:7:15:1|0:1:37:43:0:0/1:28:23:0/1:31:10:.:.:.
chr12	13199068	HG3_PB_SVrefine2PBcRDovetail_6122	AAGAAAATGTTCACTTGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9097:HG3_PB_pbsv_12696:HG2_PB_assemblyticsPBcR_5142:HG2_Ill_Krunchall_17639:HG2_PB_pbsv_13011:HG4_PB_pbsv_13001:HG2_PB_SVrefine2Falcon1plusDovetail_2360:HG4_Ill_svaba_16191:HG4_Ill_SVrefine2DISCOVARDovetail_9233:HG4_Ill_GATKHC_20753:HG4_Ill_GATKHCSBGrefine_8936:HG4_10X_allpass_2442:HG3_PB_SVrefine2PBcRDovetail_6122:HG3_Ill_svaba_16275:HG3_Ill_manta_2942:HG3_Ill_GATKHC_20624:HG3_Ill_GATKHCSBGrefine_8574:HG2_PB_SVrefine2PBcRplusDovetail_2251:HG2_PB_SVrefine2PB10Xhap12_9385:HG2_Ill_svaba_16135:HG2_Ill_manta_3596:HG2_Ill_breakscan11_1860:HG2_Ill_SpiralSDKrefine_3343:HG2_Ill_SVrefine2DISCOVARplusDovetail_2597:HG2_Ill_GATKHC_20758:HG2_Ill_GATKHCSBGrefine_8678:HG2_10X_allpass_2088;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9097:HG4_Ill_svaba_16191:HG4_Ill_SVrefine2DISCOVARDovetail_9233:HG4_Ill_GATKHC_20753:HG4_Ill_GATKHCSBGrefine_8936:HG4_10X_allpass_2442:HG3_PB_SVrefine2PBcRDovetail_6122:HG3_Ill_svaba_16275:HG3_Ill_manta_2942:HG3_Ill_GATKHC_20624:HG3_Ill_GATKHCSBGrefine_8574:HG2_PB_SVrefine2PBcRplusDovetail_2251:HG2_PB_SVrefine2PB10Xhap12_9385:HG2_Ill_svaba_16135:HG2_Ill_manta_3596:HG2_Ill_breakscan11_1860:HG2_Ill_SpiralSDKrefine_3343:HG2_Ill_SVrefine2DISCOVARplusDovetail_2597:HG2_Ill_GATKHC_20758:HG2_Ill_GATKHCSBGrefine_8678:HG2_10X_allpass_2088;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00961538;ClusterMaxSizeDiff=0.00956938;ClusterMaxEditDist=0.0192308;PBcalls=8;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-104;DistBack=7844;DistForward=-104;DistMin=-104;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=12:13199069-13199191;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=732.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:18:0|1:32:1:3:23:1|0:0:16:33:1:0/1:35:27:./.:.:.:.:.:.
chr12	13545544	HG2_PB_SVrefine2PBcRplusDovetail_2252	TAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGTTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGAGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTCTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTAGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGTTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGGTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCCAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCGTTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGTGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCATTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCCGCTTGGTGCAGAACTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCGGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTGAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCTCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGAGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGTTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGTTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTTGGCTCGCGCACGGTGCGCGCACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGACGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCACGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGAGAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATGATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAACGATAGACTGGATTAAGAAAATGTGTCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGAGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9100:HG3_PB_SVrefine2PBcRDovetail_6123:HG2_PB_SVrefine2PBcRplusDovetail_2252:HG2_PB_SVrefine2PB10Xhap12_9386:HG2_PB_SVrefine2Falcon2Bionano_6408:HG2_PB_SVrefine2Falcon1plusDovetail_2361;NumClusterSVs=6;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9100:HG3_PB_SVrefine2PBcRDovetail_6123:HG2_PB_SVrefine2PBcRplusDovetail_2252:HG2_PB_SVrefine2PB10Xhap12_9386:HG2_PB_SVrefine2Falcon2Bionano_6408:HG2_PB_SVrefine2Falcon1plusDovetail_2361;NumExactMatchSVs=6;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=5;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-6074;DistBack=40851;DistForward=-6060;DistMin=-6060;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1727;REFWIDENED=12:13545545-13553345;PctSeqSimilarity=0.979;PctSizeSimilarity=0.9997;PctRecOverlap=0.9295;SizeDiff=2;StartDistance=-428;EndDistance=-426;GTMatch=0;TruScore=96;MatchId=733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:49:1/1:1:9:1:12:./.:5:0:3:0:./.:0:0:./.:38:438:6064:.:.
chr12	15666018	HG2_Ill_150bpfermikitraw_16310	GAAAGAAAGAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAGA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_12706:HG2_PB_assemblyticsfalcon_5337:HG2_PB_assemblyticsPBcR_5163:HG3_Ill_svaba_16295:HG2_PB_pbsv_13021:HG3_PB_assemblyticsfalcon_5346:HG2_PB_PB10Xdip_6926:HG2_PB_HySA_23621:HG3_Ill_manta_2944:HG3_Ill_GATKHCSBGrefine_8583:HG3_Ill_250bpfermikitraw_16831:HG3_Ill_150bpfermikitraw_16339:HG2_Ill_svaba_16155:HG2_Ill_Krunchall_17663:HG2_Ill_GATKHC_20780:HG2_Ill_GATKHCSBGrefine_8687:HG2_Ill_250bpfermikitraw_17322:HG2_Ill_150bpfermikitraw_16310;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16310:HG2_Ill_250bpfermikitraw_17322:HG2_Ill_GATKHCSBGrefine_8687:HG2_Ill_GATKHC_20780:HG2_Ill_Krunchall_17663:HG2_Ill_svaba_16155:HG3_Ill_150bpfermikitraw_16339:HG3_Ill_250bpfermikitraw_16831:HG3_Ill_GATKHCSBGrefine_8583:HG3_Ill_manta_2944:HG3_Ill_svaba_16295;NumExactMatchSVs=11;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.291667;PBcalls=7;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=36394;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=156;REFWIDENED=12:15665938-15666171;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=734.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:37:0|1:20:5:3:31:./.:19:10:4:18:0/1:13:27:./.:.:.:.:.:.
chr12	16420124	HG2_PB_SVrefine2PBcRplusDovetail_2255	AGTGTACCATTTAAATATTCCAGAGAAAGTATTTTATTCGACATTGATCAATGTTCAGATAATTTTCCAGGGGATTTGTGACTCTTCAGTGGGATAAAACTGAACTGTTTAGAGGAGTCAGTGAAATAAAATACTTGGGCACCGATTTCATGGTGGATGGCTGTTGTCAATCATTGCTTCTTTTAGCATAACCATTGGCCACTGAAGTACTTCAAAGAATATTCTGGCAGCCAAATATTTGGAGAAAGAAGGGGAAAATAGAAACTTTAGAGTTCCTTTTTATCTGTAAATACATATTTTTTTTTCCAGCAGAGCTGTTAAAGACAATTTAATAAAATATTGATTTTGGTAACTAGACATTAGGATTGAAGAAGTTAAGTTTTTAATTTAAAAATTTGGGGGACTGCTTTACTCTCTCTCCCAAGCTCTCCCTACCTCTCTTACTCTTTAACCTGTTTCATTCCCTTTCTGTCCTTTCCCATTCCCTCTCCCTCCTTTCCCATTCCCTCATTCTTTTGCCAACAACCCCCGCCCACCCCCCACCTTTTTTTTTTTTTTTTTTTTTTTGAGATAGGGTCTCACTCTGTCACCCAGACTAGACTGGTGCAGGGTGTTCACAGCTCACTGTAATCTCAGCCTCCTGAGCTCAAGCGATTCTTCCGCTTCAGCCTCTCAAGTACATGTGACTACAGGTTCACCCCACCATGCCTGGGTAATTAAAAAAAAATGTTTTTTTGGTAGAGATGGGGTTACTCAGGCTTGTCTCGAACCCCTGGCCTTGAGTGATCCTCCTGCCTAGGCCTCCCAGAGCCCAGGGATTCAGGTGTGAGTCACTGTGCCTGGCCAACACCCAAATTTTAACAGTTGTCCTGACTCATGTACCTTTCAAGCTTAAAAGAGAACATGCGCCCGGCTCTGTGGCTCATGCCTGTAATCCTGGCACTTTGGAGGCCAACGTGGGCAGATTGCCTGAGCTCAGGGATTTGAGACCAGCCTGGGCAACATGGTGAAACCCCATCTCTACTAAAATGCAAAAAAATTAGCTGGCGTGGTGGTATGAACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGACGGAGGTTGCAGTGAGCTCAGATCGCAAAGGTAAAGAAGGAA	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1068:HG3_PB_assemblyticsfalcon_5349:HG3_Ill_Krunchall_17325:HG2_Ill_Krunchall_17669:HG4_PB_assemblyticsfalcon_5237:HG2_PB_assemblyticsPBcR_5167:HG2_Ill_tnscope_1443:HG3_PB_SVrefine2PBcRDovetail_6130:HG2_PB_SVrefine2PBcRplusDovetail_2255:HG2_PB_SVrefine2PB10Xhap12_9393:HG2_PB_SVrefine2Falcon1plusDovetail_2368:HG2_Ill_SVrefine2DISCOVARplusDovetail_2605:HG2_10X_SVrefine210Xhap12_9109:HG2_PB_PB10Xdip_6944:HG2_Ill_MetaSV_971:HG3_PB_pbsv_12708:HG3_10X_allpass_2541:HG2_PB_pbsv_13023:HG2_PB_assemblyticsfalcon_5341:HG2_Ill_SpiralSDKrefine_3361:HG2_10X_allpass_2090;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9109:HG2_Ill_SVrefine2DISCOVARplusDovetail_2605:HG2_PB_SVrefine2Falcon1plusDovetail_2368:HG2_PB_SVrefine2PB10Xhap12_9393:HG2_PB_SVrefine2PBcRplusDovetail_2255:HG3_PB_SVrefine2PBcRDovetail_6130;NumExactMatchSVs=6;ClusterMaxShiftDist=0.140819;ClusterMaxSizeDiff=0.140819;ClusterMaxEditDist=0.140819;PBcalls=11;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-1159;DistBack=-1010;DistForward=-1081;DistMin=-1081;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=12:16420124-16421283;PctSeqSimilarity=0.9996;PctSizeSimilarity=0.9991;PctRecOverlap=0.9991;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=735.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:29:0:0:39:0|1:59:0:0:27:0/1:54:13:0/1:77:44:1176:.:.
chr12	17444825	HG3_Ill_GATKHCSBGrefine_8588	AACTGTAATGAGAACCACCATGTTCTGTTCTCTGTATTACTTTTATTTTTATTTTATAGAGTTGCTATGTTTTTCCATGTCTTTTTTCATTAGACTAAACAGACATAAATCATTTAAACTTTAACCACACCAAGACAATATTTGTAACTTCTCAACATTATTTGGCTGGCATCCTTGAGGCTTCAATAGTATGGTCTCTTCATCAAAAATATAGAATATCAATTTCAATAGATGTAGAAATCTTTATAGATAGCACATTTTTACAAATAAAAGTATGTGGAGAAGGTGATATAAAATTTGCATTGCTGCATCCTACACATTTCTCTGTGTGTGGATTGTTTTCTAAAATAAGACAATTGGAAAGTTTTCCAATGCCTGAGGAAATATAATAGATAGATACGTGTGAGGAGGTGATGATAACATCTTGTCAGCGATTTGTAACTGGCAGCTATATGTTCTTCATACTGCACTAAAAATGCCTAATATGAATGAAGTATTTTGAAGGGAAAAATCCATCATATTATCAATATAATATATTGGCTAAACATATAAGGTGATTGTAGAAATGAGAGTAATTTTTTTTTTTTTTTTTGATACACAGTCTTGCTCTGTCGCCCAGGTTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAAGCTCTTCCTCCCAGGTTCACGCCATTCTCCTGCCTTAGCCTCCCGAGTAGCTGGGAGTACAGGTGCCTGCCACCAAGCCCAGCTAATTTTTTTTTTTTTTTTGTATTTTTTAGTAGAGACGAGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACATGTGTGAGCCACCGCGCCCAGCTGAGAGTAGCTTTTTGAGTTAAAAATGAGGCACATAAATCTACTTCCTGATATTCAGTATTTCAGTTGTCATCTATTTATATTTTTCTCTTCAGACAATTTGGAAAATGCAGGATAAATTACAGGGTGAAAACAAAAGCCACTTAAAAGAAACAATCCTATGTATTGTTTGATGCATTTATATACACATTCACACATATTTTTTTAAATTGAGATTATATTGTTCATAAC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_13025:HG4_Ill_Krunchall_17984:HG3_Ill_Krunchall_17334:HG2_Ill_Krunchall_17674:HG3_PB_assemblyticsfalcon_5353:HG2_PB_assemblyticsfalcon_5345:HG4_PB_assemblyticsfalcon_5244:HG2_PB_assemblyticsPBcR_5172:HG4_PB_pbsv_13016:HG4_Ill_SVrefine2DISCOVARDovetail_9247:HG4_Ill_MetaSV_1020:HG4_Ill_GATKHCSBGrefine_8948:HG4_10X_allpass_2445:HG3_PB_pbsv_12709:HG3_PB_SVrefine2PBcRDovetail_6131:HG3_Ill_MetaSV_1069:HG3_Ill_GATKHCSBGrefine_8588:HG3_10X_allpass_2542:HG2_PB_SVrefine2PBcRplusDovetail_2257:HG2_PB_SVrefine2PB10Xhap12_9396:HG2_PB_SVrefine2Falcon2Bionano_6415:HG2_PB_SVrefine2Falcon1plusDovetail_2370:HG2_Ill_SpiralSDKrefine_3366:HG2_Ill_SVrefine2DISCOVARplusDovetail_2611:HG2_Ill_MetaSV_972:HG2_Ill_GATKHCSBGrefine_8690:HG2_10X_allpass_2091:HG2_10X_SVrefine210Xhap12_9112:HG2_Ill_tnscope_1444;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9112:HG2_10X_allpass_2091:HG2_Ill_GATKHCSBGrefine_8690:HG2_Ill_MetaSV_972:HG2_Ill_SVrefine2DISCOVARplusDovetail_2611:HG2_Ill_SpiralSDKrefine_3366:HG2_PB_SVrefine2Falcon1plusDovetail_2370:HG2_PB_SVrefine2Falcon2Bionano_6415:HG2_PB_SVrefine2PB10Xhap12_9396:HG2_PB_SVrefine2PBcRplusDovetail_2257:HG3_10X_allpass_2542:HG3_Ill_GATKHCSBGrefine_8588:HG3_Ill_MetaSV_1069:HG3_PB_SVrefine2PBcRDovetail_6131:HG3_PB_pbsv_12709:HG4_10X_allpass_2445:HG4_Ill_GATKHCSBGrefine_8948:HG4_Ill_MetaSV_1020:HG4_Ill_SVrefine2DISCOVARDovetail_9247;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00269663;ClusterMaxSizeDiff=0.00269663;ClusterMaxEditDist=0.00269784;PBcalls=12;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1112;DistBack=21996;DistForward=24235;DistMin=21996;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:17444826-17445939;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=736.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:./.:0:6:0:1:1/1:0:24:0:20:1/1:0:28:1/1:3:61:1136:.:.
chr12	17894161	HG4_Ill_scalpel_11959	ATGCTATTTATTTATTTATTTATTTATTTATTTTTTTTTTCTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTG	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1862:HG3_PB_HySA_19588:HG4_PB_assemblyticsfalcon_5248:HG2_PB_assemblyticsfalcon_5349:HG3_PB_assemblyticsfalcon_5356:HG2_PB_assemblyticsPBcR_5176:HG3_Ill_Krunchall_17339:HG2_Ill_Krunchall_17679:HG2_PB_HySA_23635:HG2_PB_pbsv_13027:HG4_PB_HySA_18909:HG3_Ill_MetaSV_1071:HG2_Ill_MetaSV_974:HG4_PB_pbsv_13018:HG4_Ill_scalpel_11959:HG4_Ill_manta_3059:HG4_Ill_MetaSV_1022:HG4_Ill_GATKHCSBGrefine_8950:HG4_10X_allpass_2447:HG3_PB_pbsv_12711:HG3_PB_SVrefine2PBcRDovetail_6132:HG3_Ill_scalpel_12471:HG3_Ill_manta_2946:HG3_Ill_GATKHCSBGrefine_8590:HG3_10X_allpass_2543:HG2_PB_SVrefine2PBcRplusDovetail_2259:HG2_PB_SVrefine2PB10Xhap12_9399:HG2_PB_SVrefine2Falcon2Bionano_6417:HG2_PB_SVrefine2Falcon1plusDovetail_2372:HG2_Ill_scalpel_12245:HG2_Ill_manta_3603:HG2_Ill_SVrefine2DISCOVARplusDovetail_2613:HG2_Ill_GATKHCSBGrefine_8692:HG2_10X_allpass_2092:HG2_10X_SVrefine210Xhap12_9116;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9116:HG2_10X_allpass_2092:HG2_Ill_GATKHCSBGrefine_8692:HG2_Ill_SVrefine2DISCOVARplusDovetail_2613:HG2_Ill_manta_3603:HG2_Ill_scalpel_12245:HG2_PB_SVrefine2Falcon1plusDovetail_2372:HG2_PB_SVrefine2Falcon2Bionano_6417:HG2_PB_SVrefine2PB10Xhap12_9399:HG2_PB_SVrefine2PBcRplusDovetail_2259:HG3_10X_allpass_2543:HG3_Ill_GATKHCSBGrefine_8590:HG3_Ill_manta_2946:HG3_Ill_scalpel_12471:HG3_PB_SVrefine2PBcRDovetail_6132:HG3_PB_pbsv_12711:HG4_10X_allpass_2447:HG4_Ill_GATKHCSBGrefine_8950:HG4_Ill_MetaSV_1022:HG4_Ill_manta_3059:HG4_Ill_scalpel_11959:HG4_PB_pbsv_13018;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0757238;ClusterMaxSizeDiff=0.0757238;ClusterMaxEditDist=0.0757238;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-227;DistBack=11031;DistForward=27552;DistMin=11031;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=12:17894162-17894397;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=737.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:35:1/1:1:11:0:5:1/1:0:23:0:13:1/1:0:50:./.:.:.:.:.:.
chr12	18317392	HG4_PB_HySA_18921	GTGCAGGGAAACTTCTCTTTATAAAGCCATCACATTTTATAGTGAGACTTATTCACTGTCACAAGAACGGTTAATAGTGAATGGTAAGGCTTATTCACTGTCACGAGAACAGCATGGGAAAAGCCCGTGATTCAATTACCTCTCACTGGTCCCTCCCATGACACATGGGAATTATGGGAGCTACAATTCAAGATGAGATTTGGGTGGGGACACAGCCAAACCATATCATTCAGCCACTCAAACCTCCCATAGTTTCAGGTGGGTAGAAGCCATTTTCTGAAAGATATAAAGTAACATATGTGTTCAACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9119:HG2_PB_HySA_23649:HG2_PB_pbsv_13030:HG3_10X_allpass_2544:HG4_PB_pbsv_13022:HG3_PB_pbsv_12713:HG3_PB_HySA_19592:HG4_PB_HySA_18921:HG4_Ill_SVrefine2DISCOVARDovetail_9251:HG4_Ill_MetaSV_1023:HG2_PB_SVrefine2PB10Xhap12_9400:HG2_PB_SVrefine2Falcon2Bionano_6418:HG2_Ill_SVrefine2DISCOVARplusDovetail_2615;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9119:HG4_PB_HySA_18921:HG4_Ill_SVrefine2DISCOVARDovetail_9251:HG4_Ill_MetaSV_1023:HG2_PB_SVrefine2PB10Xhap12_9400:HG2_PB_SVrefine2Falcon2Bionano_6418:HG2_Ill_SVrefine2DISCOVARplusDovetail_2615;NumExactMatchSVs=7;ClusterMaxShiftDist=0.134146;ClusterMaxSizeDiff=0.134146;ClusterMaxEditDist=0.134146;PBcalls=8;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-308;DistBack=15748;DistForward=14221;DistMin=14221;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=308;REFWIDENED=12:18317393-18318008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=738.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:49:1/1:0:31:1:24:./.:0:1:0:1:./.:0:6:./.:1:3:.:.:.
chr12	20862519	HG2_Ill_SpiralSDKrefine_3391	TAAGAATTGAAAACAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_1026:HG2_10X_allpass_2093:HG4_PB_assemblyticsfalcon_5276:HG2_PB_assemblyticsfalcon_5376:HG3_PB_HySA_19621:HG4_PB_pbsv_13036:HG3_Ill_Krunchall_17365:HG2_Ill_Krunchall_17706:HG3_PB_assemblyticsfalcon_5386:HG2_PB_assemblyticsPBcR_5202:HG3_PB_pbsv_12728:HG2_PB_pbsv_13041:HG2_PB_HySA_23672:HG4_Ill_MetaSV_1025:HG3_Ill_MetaSV_1073:HG2_Ill_tnscope_1445:HG2_Ill_MetaSV_975:HG4_Ill_svaba_16247:HG4_Ill_manta_3062:HG4_Ill_SVrefine2DISCOVARDovetail_9266:HG4_Ill_GATKHCSBGrefine_8971:HG4_10X_allpass_2449:HG3_PB_SVrefine2PBcRDovetail_6141:HG3_Ill_svaba_16327:HG3_Ill_manta_2947:HG3_Ill_GATKHCSBGrefine_8599:HG3_10X_allpass_2545:HG2_PB_SVrefine2PBcRplusDovetail_2267:HG2_PB_SVrefine2PB10Xhap12_9405:HG2_PB_SVrefine2Falcon2Bionano_6424:HG2_PB_SVrefine2Falcon1plusDovetail_2381:HG2_Ill_svaba_16188:HG2_Ill_scalpel_12262:HG2_Ill_manta_3605:HG2_Ill_breakscan11_1863:HG2_Ill_SpiralSDKrefine_3391:HG2_Ill_SVrefine2DISCOVARplusDovetail_2624:HG2_Ill_GATKHCSBGrefine_8712:HG2_10X_SVrefine210Xhap12_9128;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9128:HG2_Ill_GATKHCSBGrefine_8712:HG2_Ill_SVrefine2DISCOVARplusDovetail_2624:HG2_Ill_SpiralSDKrefine_3391:HG2_Ill_breakscan11_1863:HG2_Ill_manta_3605:HG2_Ill_scalpel_12262:HG2_Ill_svaba_16188:HG2_PB_SVrefine2Falcon1plusDovetail_2381:HG2_PB_SVrefine2Falcon2Bionano_6424:HG2_PB_SVrefine2PB10Xhap12_9405:HG2_PB_SVrefine2PBcRplusDovetail_2267:HG3_10X_allpass_2545:HG3_Ill_GATKHCSBGrefine_8599:HG3_Ill_manta_2947:HG3_Ill_svaba_16327:HG3_PB_SVrefine2PBcRDovetail_6141:HG4_10X_allpass_2449:HG4_Ill_GATKHCSBGrefine_8971:HG4_Ill_SVrefine2DISCOVARDovetail_9266:HG4_Ill_manta_3062:HG4_Ill_svaba_16247;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0873494;ClusterMaxSizeDiff=0.0873494;ClusterMaxEditDist=0.0873494;PBcalls=14;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-338;DistBack=85770;DistForward=-324;DistMin=-324;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=12:20862520-20862872;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:1:29:1:25:1/1:0:34:0:25:1/1:0:37:1/1:0:9:.:.:.
chr12	21775427	HG2_PB_assemblyticsPBcR_5211	TTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCCCAGCACCATT	C	20	PASS	ClusterIDs=HG3_10X_allpass_2547:HG4_Ill_GATKHCSBGrefine_8975:HG3_Ill_GATKHCSBGrefine_8602:HG2_Ill_GATKHCSBGrefine_8716:HG4_Ill_manta_3063:HG4_Ill_SVrefine2DISCOVARDovetail_9272:HG3_PB_assemblyticsfalcon_5393:HG3_PB_SVrefine2PBcRDovetail_6142:HG3_Ill_manta_2948:HG2_PB_assemblyticsPBcR_5211:HG2_PB_SVrefine2PBcRplusDovetail_2269:HG2_PB_SVrefine2PB10Xhap12_9407:HG2_PB_SVrefine2Falcon2Bionano_6425:HG2_PB_SVrefine2Falcon1plusDovetail_2383:HG2_Ill_manta_3606:HG2_Ill_SVrefine2DISCOVARplusDovetail_2628:HG2_10X_SVrefine210Xhap12_9130:HG2_10X_allpass_2094:HG2_PB_assemblyticsfalcon_5382:HG4_Ill_MetaSV_1027:HG4_Ill_Krunchall_18028:HG2_Ill_Krunchall_17715:HG3_PB_HySA_19627:HG2_PB_HySA_23680:HG2_PB_pbsv_13043:HG4_PB_HySA_18951:HG2_Ill_tnscope_1446:HG4_PB_assemblyticsfalcon_5283:HG4_Ill_svaba_16255:HG3_Ill_svaba_16337:HG3_Ill_MetaSV_1074:HG2_Ill_svaba_16195:HG4_PB_pbsv_13038:HG3_PB_pbsv_12730;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9130:HG2_Ill_SVrefine2DISCOVARplusDovetail_2628:HG2_Ill_manta_3606:HG2_PB_SVrefine2Falcon1plusDovetail_2383:HG2_PB_SVrefine2Falcon2Bionano_6425:HG2_PB_SVrefine2PB10Xhap12_9407:HG2_PB_SVrefine2PBcRplusDovetail_2269:HG2_PB_assemblyticsPBcR_5211:HG3_Ill_manta_2948:HG3_PB_SVrefine2PBcRDovetail_6142:HG3_PB_assemblyticsfalcon_5393:HG4_Ill_SVrefine2DISCOVARDovetail_9272:HG4_Ill_manta_3063;NumExactMatchSVs=13;ClusterMaxShiftDist=0.1563;ClusterMaxSizeDiff=0.1563;ClusterMaxEditDist=0.1563;PBcalls=15;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=-31;DistForward=9356;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=12:21775427-21775746;PctSeqSimilarity=0.9919;PctSizeSimilarity=1;PctRecOverlap=0.9625;SizeDiff=0;StartDistance=12;EndDistance=12;GTMatch=0;TruScore=98;MatchId=740.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:40:1/1:2:18:0:17:./.:0:4:0:8:1/1:0:35:./.:1:13:.:.:.
chr12	22047473	HG2_Ill_GATKHCSBGrefine_8717	TCTGTTGTTTTGGGGTCCTCACTGTGGATCTTTACTAAAACTGTCAGCATTAATATCCAAAGAAGACTTACTTCCATTTTTTTTTTTTTGAGACACGGTATCA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1864:HG2_Ill_Krunchall_17717:HG2_PB_HySA_23682:HG4_Ill_Krunchall_18030:HG2_PB_assemblyticsfalcon_5384:HG4_PB_HySA_18952:HG4_PB_pbsv_13039:HG4_Ill_svaba_16257:HG4_Ill_scalpel_11979:HG4_Ill_manta_3064:HG4_Ill_SVrefine2DISCOVARDovetail_9274:HG4_Ill_GATKHC_20827:HG4_Ill_GATKHCSBGrefine_8976:HG4_Ill_250bpfermikitraw_17213:HG4_Ill_150bpfermikitraw_16545:HG4_CG_vcfBeta_8272:HG4_10X_allpass_2450:HG2_PB_pbsv_13044:HG2_PB_SVrefine2Falcon1plusDovetail_2384:HG2_Ill_svaba_16197:HG2_Ill_scalpel_12272:HG2_Ill_SpiralSDKrefine_3399:HG2_Ill_GATKHC_20839:HG2_Ill_GATKHCSBGrefine_8717:HG2_10X_allpass_2095:HG2_10X_SVrefine210Xhap12_9131;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9131:HG2_10X_allpass_2095:HG2_Ill_GATKHCSBGrefine_8717:HG2_Ill_GATKHC_20839:HG2_Ill_SpiralSDKrefine_3399:HG2_Ill_scalpel_12272:HG2_Ill_svaba_16197:HG2_PB_SVrefine2Falcon1plusDovetail_2384:HG2_PB_pbsv_13044:HG4_10X_allpass_2450:HG4_CG_vcfBeta_8272:HG4_Ill_150bpfermikitraw_16545:HG4_Ill_250bpfermikitraw_17213:HG4_Ill_GATKHCSBGrefine_8976:HG4_Ill_GATKHC_20827:HG4_Ill_SVrefine2DISCOVARDovetail_9274:HG4_Ill_manta_3064:HG4_Ill_scalpel_11979:HG4_Ill_svaba_16257:HG4_PB_pbsv_13039;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0292683;ClusterMaxSizeDiff=0.0292683;ClusterMaxEditDist=0.0295567;PBcalls=6;Illcalls=16;TenXcalls=3;CGcalls=1;PBexactcalls=3;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=1;HG2count=13;HG3count=0;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-102;DistBack=31210;DistForward=-97;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:22047474-22047577;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:22:1|0:0:16:24:3:1|0:0:25:32:0:0/1:47:15:./.:.:.:.:.:.
chr12	22129565	HG2_PB_SVrefine2Falcon2Bionano_6426	CAGGGGCATACTGTGAAGAACTTGACCTCTAATTAATAGCTAAGGCCGATCCTAAGAGAGCCAATTGTGGGAGATTGTCAGCTACTATATTCCTCATAGCTGGGTAGAAAGCCCTCTTGAAGGAAGATCTGAGCAGTACATCTTAGTGTCTGTCACAGACACACAGAGCTTGGATGACTCAAAAAAAGAAAAAGAGAAATAATTCTTCTGATTCTAAATATGTAACCCTCATTCCCTGAGGCGCAGTACTTCAAATTTAAGAACAAAGTTATAAAAACAACTAGTTAAGAAAAAAAGATCTGTAATCCTACTTACTCCTCAAGCAATATAACCCCCAGAAGTTCTTCTCGAGTAAATTTATGAATATCCAGTGGGTGTCTCACAAGAGTTCTAATAACATGCTGTTGACTACCATCGGGGATTCTACCAATTTTCCTATCTCCTAATCTAGATCACTGGATAATGTGTCTAATTGCTCCTAAGTTAAGAGTGGTAGCTATGCCAAACCATTGGCAGTTTCACTTCCCAGACACTACTCCTGAGGATGCTACATAGCCCAAGACTGAGGGTTCTGACTTCTATTCAGGGGTTCTGATGTTTTATATCCAGAGAATACAAGGCACTGAAATCAGCATTTTATCATTTTATCAATAACACAACTCATCAACATTGCTAACATTCTGTCCCTGTGTCATCAATGTCATCACTTCTAAGAGGACTCAATGTCTCATGAAGGTTATAGAACAACAGCTTTTTGAGATTTTACTTACTTTTTTGTTGCAGCTTTCTTGCTCTCAGATTGAGAATGGCTGGTCTAATTGAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9132:HG2_PB_PB10Xdip_7025:HG2_PB_PB10Xdip_7024:HG3_PB_pbsv_12731:HG4_PB_pbsv_13042:HG2_PB_pbsv_13047:HG3_PB_SVrefine2Falcon1Dovetail_7887:HG4_Ill_SVrefine2DISCOVARDovetail_9275:HG3_PB_SVrefine2PBcRDovetail_6143:HG3_PB_HySA_19630:HG2_PB_SVrefine2PBcRplusDovetail_2270:HG2_PB_SVrefine2PB10Xhap12_9410:HG2_PB_SVrefine2Falcon2Bionano_6426:HG2_PB_SVrefine2Falcon1plusDovetail_2387:HG2_Ill_SVrefine2DISCOVARplusDovetail_2630;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9132:HG4_Ill_SVrefine2DISCOVARDovetail_9275:HG3_PB_SVrefine2PBcRDovetail_6143:HG3_PB_HySA_19630:HG2_PB_SVrefine2PBcRplusDovetail_2270:HG2_PB_SVrefine2PB10Xhap12_9410:HG2_PB_SVrefine2Falcon2Bionano_6426:HG2_PB_SVrefine2Falcon1plusDovetail_2387:HG2_Ill_SVrefine2DISCOVARplusDovetail_2630;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00488102;ClusterMaxSizeDiff=0.00487211;ClusterMaxEditDist=0.00854179;PBcalls=12;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-822;DistBack=4675;DistForward=-689;DistMin=-689;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=823;REFWIDENED=12:22129566-22131210;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=742.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:0:16:0:9:./.:0:0:0:0:./.:0:0:./.:1:19:.:.:.
chr12	25603751	HG4_Ill_manta_3066	GTGGGAAAAGGACATAATCAGACACTTTTCAAAAGAAGACATACATGTGGCCAACCAGCATA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_5432:HG3_PB_assemblyticsfalcon_5436:HG4_PB_assemblyticsfalcon_5334:HG3_PB_HySA_19668:HG4_PB_pbsv_13059:HG2_PB_pbsv_13067:HG3_PB_pbsv_12749:HG2_PB_HySA_23735:HG4_Ill_svaba_16286:HG4_Ill_manta_3066:HG4_Ill_SVrefine2DISCOVARDovetail_9300:HG4_Ill_Krunchall_18060:HG4_Ill_GATKHCSBGrefine_8993:HG4_Ill_250bpfermikitraw_17243:HG4_Ill_150bpfermikitraw_16582:HG3_Ill_svaba_16371:HG3_Ill_scalpel_12520:HG3_Ill_Krunchall_17403:HG3_Ill_GATKHCSBGrefine_8618:HG3_Ill_250bpfermikitraw_16912:HG3_Ill_150bpfermikitraw_16426:HG2_PB_assemblyticsPBcR_5255:HG2_Ill_svaba_16232:HG2_Ill_manta_3610:HG2_Ill_SpiralSDKrefine_3414:HG2_Ill_GATKHCSBGrefine_8734:HG2_Ill_250bpfermikitraw_17408;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17408:HG2_Ill_GATKHCSBGrefine_8734:HG2_Ill_SpiralSDKrefine_3414:HG2_Ill_manta_3610:HG2_Ill_svaba_16232:HG2_PB_assemblyticsPBcR_5255:HG3_Ill_150bpfermikitraw_16426:HG3_Ill_250bpfermikitraw_16912:HG3_Ill_GATKHCSBGrefine_8618:HG3_Ill_Krunchall_17403:HG3_Ill_scalpel_12520:HG3_Ill_svaba_16371:HG4_Ill_150bpfermikitraw_16582:HG4_Ill_250bpfermikitraw_17243:HG4_Ill_GATKHCSBGrefine_8993:HG4_Ill_Krunchall_18060:HG4_Ill_SVrefine2DISCOVARDovetail_9300:HG4_Ill_manta_3066:HG4_Ill_svaba_16286;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.0650406;PBcalls=9;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-61;DistBack=39589;DistForward=43883;DistMin=39589;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=70;REFWIDENED=12:25603752-25603882;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=743.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:0|1:24:2:4:38:0|1:24:0:0:14:0/1:30:22:./.:.:.:.:.:.
chr12	25670020	HG2_PB_SVrefine2PBcRplusDovetail_2283	AGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCTCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAATCAACCCAAATGTCCAATAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATCTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACTCTGGGGACTGTTGT	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_8735:HG2_PB_HySA_23736:HG3_10X_allpass_2548:HG2_10X_allpass_2096:HG3_PB_assemblyticsfalcon_5437:HG4_PB_assemblyticsfalcon_5335:HG2_PB_assemblyticsfalcon_5433:HG2_PB_assemblyticsPBcR_5256:HG4_PB_HySA_19003:HG4_Ill_MetaSV_1035:HG3_Ill_MetaSV_1080:HG2_Ill_tnscope_1447:HG2_Ill_MetaSV_984:HG4_PB_pbsv_13060:HG4_Ill_SVrefine2DISCOVARDovetail_9301:HG4_Ill_GATKHCSBGrefine_8994:HG4_10X_allpass_2451:HG3_PB_pbsv_12750:HG3_PB_SVrefine2PBcRDovetail_6154:HG3_Ill_GATKHCSBGrefine_8619:HG2_PB_pbsv_13068:HG2_PB_SVrefine2PBcRplusDovetail_2283:HG2_PB_SVrefine2PB10Xhap12_9426:HG2_PB_SVrefine2Falcon2Bionano_6439:HG2_PB_SVrefine2Falcon1plusDovetail_2404:HG2_Ill_SVrefine2DISCOVARplusDovetail_2653;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8735:HG4_PB_pbsv_13060:HG4_Ill_SVrefine2DISCOVARDovetail_9301:HG4_Ill_GATKHCSBGrefine_8994:HG4_10X_allpass_2451:HG3_PB_pbsv_12750:HG3_PB_SVrefine2PBcRDovetail_6154:HG3_Ill_GATKHCSBGrefine_8619:HG2_PB_pbsv_13068:HG2_PB_SVrefine2PBcRplusDovetail_2283:HG2_PB_SVrefine2PB10Xhap12_9426:HG2_PB_SVrefine2Falcon2Bionano_6439:HG2_PB_SVrefine2Falcon1plusDovetail_2404:HG2_Ill_SVrefine2DISCOVARplusDovetail_2653;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0212766;ClusterMaxSizeDiff=0.0212766;ClusterMaxEditDist=0.0212766;PBcalls=14;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-471;DistBack=-556;DistForward=149;DistMin=-556;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:25670021-25670493;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:0:33:1:27:1/1:0:12:0:17:./.:0:8:./.:2:14:.:.:.
chr12	26511020	HG2_PB_SVrefine2Falcon2Bionano_6440	TAAAGAATAAAGTCGTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGTCCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_19008:HG2_PB_pbsv_13070:HG2_PB_assemblyticsPBcR_5261:HG4_PB_assemblyticsfalcon_5338:HG3_PB_assemblyticsfalcon_5440:HG2_PB_assemblyticsfalcon_5439:HG4_Ill_Krunchall_18066:HG3_PB_pbsv_12752:HG3_Ill_Krunchall_17412:HG2_Ill_Krunchall_17755:HG3_PB_HySA_19675:HG4_Ill_MetaSV_1038:HG3_Ill_MetaSV_1081:HG2_Ill_tnscope_1448:HG2_Ill_MetaSV_985:HG4_PB_pbsv_13061:HG4_Ill_svaba_16293:HG4_Ill_scalpel_12001:HG4_Ill_manta_3067:HG4_Ill_SVrefine2DISCOVARDovetail_9303:HG4_Ill_GATKHCSBGrefine_8995:HG4_10X_allpass_2453:HG3_PB_SVrefine2PBcRDovetail_6155:HG3_Ill_svaba_16379:HG3_Ill_scalpel_12525:HG3_Ill_manta_2954:HG3_Ill_GATKHCSBGrefine_8620:HG3_10X_allpass_2549:HG2_PB_SVrefine2PBcRplusDovetail_2284:HG2_PB_SVrefine2PB10Xhap12_9428:HG2_PB_SVrefine2Falcon2Bionano_6440:HG2_PB_SVrefine2Falcon1plusDovetail_2406:HG2_PB_HySA_23744:HG2_Ill_svaba_16239:HG2_Ill_scalpel_12302:HG2_Ill_manta_3611:HG2_Ill_breakscan11_1865:HG2_Ill_SVrefine2DISCOVARplusDovetail_2654:HG2_Ill_GATKHCSBGrefine_8736:HG2_10X_allpass_2097;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_2097:HG2_Ill_GATKHCSBGrefine_8736:HG2_Ill_SVrefine2DISCOVARplusDovetail_2654:HG2_Ill_breakscan11_1865:HG2_Ill_manta_3611:HG2_Ill_scalpel_12302:HG2_Ill_svaba_16239:HG2_PB_HySA_23744:HG2_PB_SVrefine2Falcon1plusDovetail_2406:HG2_PB_SVrefine2Falcon2Bionano_6440:HG2_PB_SVrefine2PB10Xhap12_9428:HG2_PB_SVrefine2PBcRplusDovetail_2284:HG3_10X_allpass_2549:HG3_Ill_GATKHCSBGrefine_8620:HG3_Ill_manta_2954:HG3_Ill_scalpel_12525:HG3_Ill_svaba_16379:HG3_PB_SVrefine2PBcRDovetail_6155:HG4_10X_allpass_2453:HG4_Ill_GATKHCSBGrefine_8995:HG4_Ill_SVrefine2DISCOVARDovetail_9303:HG4_Ill_manta_3067:HG4_Ill_scalpel_12001:HG4_Ill_svaba_16293:HG4_PB_pbsv_13061;NumExactMatchSVs=25;ClusterMaxShiftDist=0.101538;ClusterMaxSizeDiff=0.101538;ClusterMaxEditDist=0.101538;PBcalls=15;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=-873;DistForward=-316;DistMin=-873;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=12:26511021-26511369;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:0:24:2:37:1/1:0:17:0:22:1/1:0:49:0/1:2:9:.:.:.
chr12	27433987	HG4_10X_allpass_2454	TGGCTTTAGCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCGCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_887:HG2_PB_assemblyticsfalcon_5446:HG4_PB_assemblyticsfalcon_5344:HG3_PB_assemblyticsfalcon_5448:HG4_Ill_Krunchall_18073:HG3_Ill_Krunchall_17422:HG2_PB_PB10Xdip_7067:HG4_PB_pbsv_13065:HG3_PB_pbsv_12759:HG2_PB_SVrefine2PB10Xhap12_9432:HG2_PB_assemblyticsPBcR_5273:HG2_PB_SVrefine2PBcRplusDovetail_2286:HG4_Ill_MetaSV_1040:HG4_Ill_manta_3069:HG4_Ill_SVrefine2DISCOVARDovetail_9307:HG4_Ill_GATKHCSBGrefine_8998:HG4_10X_allpass_2454:HG3_PB_SVrefine2PBcRDovetail_6157:HG3_Ill_GATKHCSBGrefine_8623:HG3_10X_allpass_2550:HG2_PB_pbsv_13075:HG2_PB_SVrefine2PB10Xhap12_9431:HG2_PB_SVrefine2Falcon2Bionano_6442:HG2_PB_SVrefine2Falcon1plusDovetail_2408:HG2_Ill_manta_3614:HG2_Ill_GATKHCSBGrefine_8739:HG2_10X_allpass_2098:HG4_Ill_Spiral_1028:HG3_Ill_Spiral_13584:HG2_Ill_breakscan11_1866;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_2098:HG2_Ill_GATKHCSBGrefine_8739:HG2_Ill_manta_3614:HG2_PB_SVrefine2Falcon1plusDovetail_2408:HG2_PB_SVrefine2Falcon2Bionano_6442:HG2_PB_SVrefine2PB10Xhap12_9431:HG2_PB_pbsv_13075:HG3_10X_allpass_2550:HG3_Ill_GATKHCSBGrefine_8623:HG3_PB_SVrefine2PBcRDovetail_6157:HG4_10X_allpass_2454:HG4_Ill_GATKHCSBGrefine_8998:HG4_Ill_SVrefine2DISCOVARDovetail_9307:HG4_Ill_manta_3069;NumExactMatchSVs=14;ClusterMaxShiftDist=0.11747;ClusterMaxSizeDiff=0.11747;ClusterMaxEditDist=0.11747;PBcalls=14;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-467;DistForward=-128;DistMin=-467;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:27433988-27434334;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=746.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:35:0|1:30:0:0:30:1|0:0:37:35:0:0/1:26:27:0/1:34:13:.:.:.
chr12	28823496	HG4_Ill_GATKHCSBGrefine_9005	CACACATAAGAATATTAACCTTAAATGTAAATGGGCTAAAAGCCCACCAATTAACAGACTGGCAAATTGGATAAAGAGTCAAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9144:HG4_PB_assemblyticsfalcon_5355:HG2_PB_assemblyticsPBcR_5279:HG2_PB_assemblyticsfalcon_5454:HG2_PB_pbsv_13080:HG2_PB_HySA_23782:HG4_PB_pbsv_13071:HG4_Ill_svaba_16310:HG4_Ill_scalpel_12009:HG4_Ill_manta_3070:HG4_Ill_Krunchall_18087:HG4_Ill_GATKHC_20894:HG4_Ill_GATKHCSBGrefine_9005:HG4_Ill_250bpfermikitraw_17269:HG4_Ill_150bpfermikitraw_16608:HG4_10X_allpass_2455:HG2_PB_SVrefine2PBcRplusDovetail_2289:HG2_PB_SVrefine2PB10Xhap12_9436:HG2_Ill_svaba_16256:HG2_Ill_manta_3615:HG2_Ill_SpiralSDKrefine_3429:HG2_Ill_Krunchall_17774:HG2_Ill_GATKHC_20910:HG2_Ill_GATKHCSBGrefine_8745:HG2_Ill_250bpfermikitraw_17438:HG2_Ill_150bpfermikitraw_16418:HG2_10X_allpass_2099;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9144:HG4_PB_pbsv_13071:HG4_Ill_svaba_16310:HG4_Ill_scalpel_12009:HG4_Ill_manta_3070:HG4_Ill_Krunchall_18087:HG4_Ill_GATKHC_20894:HG4_Ill_GATKHCSBGrefine_9005:HG4_Ill_250bpfermikitraw_17269:HG4_Ill_150bpfermikitraw_16608:HG4_10X_allpass_2455:HG2_PB_SVrefine2PBcRplusDovetail_2289:HG2_PB_SVrefine2PB10Xhap12_9436:HG2_Ill_svaba_16256:HG2_Ill_manta_3615:HG2_Ill_SpiralSDKrefine_3429:HG2_Ill_Krunchall_17774:HG2_Ill_GATKHC_20910:HG2_Ill_GATKHCSBGrefine_8745:HG2_Ill_250bpfermikitraw_17438:HG2_Ill_150bpfermikitraw_16418:HG2_10X_allpass_2099;NumExactMatchSVs=22;ClusterMaxShiftDist=0.136646;ClusterMaxSizeDiff=0.136646;ClusterMaxEditDist=0.136646;PBcalls=8;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-82;DistBack=19777;DistForward=21425;DistMin=19777;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=12:28823497-28823584;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=747.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:./.:18:7:8:26:1|0:0:15:20:0:0/1:28:28:./.:.:.:.:.:.
chr12	29573407	HG2_Ill_scalpel_12315	AAAAAGCAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1867:HG2_PB_assemblyticsPBcR_5285:HG2_PB_assemblyticsfalcon_5459:HG4_Ill_Krunchall_18103:HG2_Ill_Krunchall_17788:HG4_Ill_Spiral_1029:HG2_Ill_Spiral_889:HG3_PB_pbsv_12766:HG4_PB_pbsv_13076:HG4_PB_assemblyticsfalcon_5358:HG4_Ill_scalpel_12015:HG4_Ill_manta_3073:HG4_Ill_SVrefine2DISCOVARDovetail_9314:HG4_Ill_GATKHCSBGrefine_9012:HG4_10X_allpass_2459:HG3_PB_assemblyticsfalcon_5461:HG3_PB_SVrefine2Falcon1Dovetail_7894:HG3_Ill_scalpel_12544:HG3_Ill_manta_2959:HG3_Ill_GATKHCSBGrefine_8628:HG3_10X_allpass_2552:HG2_PB_pbsv_13083:HG2_PB_SVrefine2PBcRplusDovetail_2290:HG2_PB_SVrefine2PB10Xhap12_9438:HG2_PB_SVrefine2Falcon2Bionano_6446:HG2_PB_SVrefine2Falcon1plusDovetail_2412:HG2_Ill_scalpel_12315:HG2_Ill_manta_3617:HG2_Ill_SpiralSDKrefine_3434:HG2_Ill_MetaSV_989:HG2_Ill_GATKHCSBGrefine_8749:HG2_10X_allpass_2100:HG2_10X_SVrefine210Xhap12_9147:HG2_PB_HySA_23788:HG4_Ill_MetaSV_1045:HG3_Ill_MetaSV_1088:HG2_Ill_tnscope_1449;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9147:HG2_10X_allpass_2100:HG2_Ill_GATKHCSBGrefine_8749:HG2_Ill_MetaSV_989:HG2_Ill_SpiralSDKrefine_3434:HG2_Ill_manta_3617:HG2_Ill_scalpel_12315:HG2_PB_SVrefine2Falcon1plusDovetail_2412:HG2_PB_SVrefine2Falcon2Bionano_6446:HG2_PB_SVrefine2PB10Xhap12_9438:HG2_PB_SVrefine2PBcRplusDovetail_2290:HG2_PB_pbsv_13083:HG3_10X_allpass_2552:HG3_Ill_GATKHCSBGrefine_8628:HG3_Ill_manta_2959:HG3_Ill_scalpel_12544:HG3_PB_SVrefine2Falcon1Dovetail_7894:HG3_PB_assemblyticsfalcon_5461:HG4_10X_allpass_2459:HG4_Ill_GATKHCSBGrefine_9012:HG4_Ill_SVrefine2DISCOVARDovetail_9314:HG4_Ill_manta_3073:HG4_Ill_scalpel_12015:HG4_PB_assemblyticsfalcon_5358;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0742942;ClusterMaxSizeDiff=0.0742942;ClusterMaxEditDist=0.0742942;PBcalls=13;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-341;DistBack=8655;DistForward=-331;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=12:29573408-29573761;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=748.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:34:38:0|1:31:3:1:35:1|0:0:28:24:0:0/1:22:21:0/1:36:5:.:.:.
chr12	30371317	HG2_PB_SVrefine2PB10Xhap12_9442	AATGGACTGAAAATTAAGTACAGTCATGTACTGTAAACTGCATATACAGGGGTAGATTTGTAAGATTATATTGGAGATGAAAAATTTCTAATGCCTAGTATGTCATAGTTGTTTTAACGTTATCAAGGCGCAATGCATTATGCATGGGTTTGTGGTGATGCTGGTGTAAACAAACCTACTACACTGCCAGTCTTGCAAAATAGAGCACATGTAATAATATATGGTACACGAGACTTGATAATGATAATAAATGACTATGTTAGTGTTTACGTACTTACTATACTTTTTATTGTTATTTTACAGTGTACTCCTTCTAGTTATTAAAAAAAGTAAAGCTAAGTATAAAACAGCTGCAGGTAGGTCTTTCAGGAGATGTTCTAGAAGAAAGCATTGTTACAGGAGGAGACAGCTCCATACATGTTATTG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_12772:HG2_PB_SVrefine2PB10Xhap12_9443:HG2_10X_allpass_2102:HG4_Ill_MetaSV_1048:HG3_PB_HySA_19716:HG3_Ill_MetaSV_1092:HG2_PB_SVrefine2PBcRplusDovetail_2294:HG2_Ill_tnscope_1450:HG4_Ill_manta_3074:HG4_Ill_SVrefine2DISCOVARDovetail_9317:HG4_Ill_GATKHCSBGrefine_9019:HG4_10X_allpass_2463:HG3_Ill_scalpel_12552:HG3_Ill_manta_2962:HG3_Ill_GATKHCSBGrefine_8635:HG3_10X_allpass_2556:HG2_PB_assemblyticsfalcon_5469:HG2_PB_SVrefine2PB10Xhap12_9442:HG2_PB_SVrefine2Falcon2Bionano_6451:HG2_PB_SVrefine2Falcon1plusDovetail_2417:HG2_Ill_SpiralSDKrefine_3442:HG2_Ill_MetaSV_991:HG2_Ill_GATKHCSBGrefine_8757:HG2_10X_SVrefine210Xhap12_9150:HG2_Ill_breakscan11_1868:HG2_PB_assemblyticsPBcR_5293:HG4_PB_assemblyticsfalcon_5367:HG3_PB_assemblyticsfalcon_5470:HG4_PB_pbsv_13083:HG3_Ill_Krunchall_17451:HG2_PB_pbsv_13088:HG2_Ill_Krunchall_17797;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9150:HG2_Ill_GATKHCSBGrefine_8757:HG2_Ill_MetaSV_991:HG2_Ill_SpiralSDKrefine_3442:HG2_PB_SVrefine2Falcon1plusDovetail_2417:HG2_PB_SVrefine2Falcon2Bionano_6451:HG2_PB_SVrefine2PB10Xhap12_9442:HG2_PB_assemblyticsfalcon_5469:HG3_10X_allpass_2556:HG3_Ill_GATKHCSBGrefine_8635:HG3_Ill_manta_2962:HG3_Ill_scalpel_12552:HG4_10X_allpass_2463:HG4_Ill_GATKHCSBGrefine_9019:HG4_Ill_SVrefine2DISCOVARDovetail_9317:HG4_Ill_manta_3074;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00941176;ClusterMaxSizeDiff=0.00941176;ClusterMaxEditDist=0.0232288;PBcalls=13;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-425;DistBack=-1;DistForward=-238;DistMin=-238;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=12:30371318-30371742;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=749.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:37:0|1:25:3:2:37:0|1:66:0:0:25:0/1:67:17:0/1:41:5:.:.:.
chr12	30500336	HG4_Ill_GATKHC_20915	TAATGGCTACTAGCCTTAATACCTGGGTGACAAAATAGTCTATACAACAAACCCACATGGCATAAAACTGCACTTGGACCCCTGAACTTA	T	20	PASS	ClusterIDs=HG2_PB_HySA_23799:HG2_Ill_Krunchall_17799:HG4_PB_HySA_19034:HG4_PB_assemblyticsfalcon_5368:HG4_Ill_svaba_16331:HG4_Ill_Krunchall_18115:HG4_Ill_GATKHC_20915:HG4_Ill_GATKHCSBGrefine_9021:HG4_Ill_Cortex_735:HG4_Ill_250bpfermikitraw_17293:HG4_Ill_150bpfermikitraw_16629:HG4_CG_vcfBeta_8311:HG4_10X_allpass_2465:HG2_PB_assemblyticsfalcon_5471:HG2_PB_SVrefine2Falcon1plusDovetail_2419:HG2_Ill_svaba_16276:HG2_Ill_scalpel_12323:HG2_Ill_breakscan11_1869:HG2_Ill_SpiralSDKrefine_3443:HG2_Ill_SVrefine2DISCOVARplusDovetail_2670:HG2_Ill_Krunchall_17798:HG2_Ill_GATKHC_20927:HG2_Ill_GATKHCSBGrefine_8758:HG2_Ill_Cortex_1802:HG2_Ill_250bpfermikitraw_17461:HG2_Ill_150bpfermikitraw_16435:HG2_CG_vcfBeta_7412:HG2_10X_SVrefine210Xhap12_9151:HG2_PB_pbsv_13090:HG4_PB_pbsv_13085;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9151:HG2_CG_vcfBeta_7412:HG2_Ill_150bpfermikitraw_16435:HG2_Ill_250bpfermikitraw_17461:HG2_Ill_Cortex_1802:HG2_Ill_GATKHCSBGrefine_8758:HG2_Ill_GATKHC_20927:HG2_Ill_Krunchall_17798:HG2_Ill_SVrefine2DISCOVARplusDovetail_2670:HG2_Ill_SpiralSDKrefine_3443:HG2_Ill_breakscan11_1869:HG2_Ill_scalpel_12323:HG2_Ill_svaba_16276:HG2_PB_SVrefine2Falcon1plusDovetail_2419:HG2_PB_assemblyticsfalcon_5471:HG4_10X_allpass_2465:HG4_CG_vcfBeta_8311:HG4_Ill_150bpfermikitraw_16629:HG4_Ill_250bpfermikitraw_17293:HG4_Ill_Cortex_735:HG4_Ill_GATKHCSBGrefine_9021:HG4_Ill_GATKHC_20915:HG4_Ill_Krunchall_18115:HG4_Ill_svaba_16331:HG4_PB_assemblyticsfalcon_5368;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0222222;ClusterMaxSizeDiff=0.0222222;ClusterMaxEditDist=0.0444444;PBcalls=7;Illcalls=19;TenXcalls=2;CGcalls=2;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=2;HG2count=18;HG3count=0;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-89;DistBack=19347;DistForward=-80;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:30500337-30500428;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=750.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:16:0|1:32:1:0:17:1|0:0:12:32:1:0/1:21:26:./.:.:.:.:2757:.
chr12	30508187	HG2_Ill_breakscan11_1870	ATTAGAGGGAATTTACTCACAGGGTCACAGAGACAAAGTCCCACTACAGGCCATCTGCTAGCTGAAGAACCAAAGCAGCTGGTAGCATGGCTCAAGCCAGTAGCATGGTTCAGTCCAGGTTCAGCAGCCTTAGACCCAAGAAAGTCAATGGTACAACCCCCTAGTCAGGCCCAAGAGCCCCCAAGAGGCTGCTGGTGCAAGTCCCACAGTCCAAAAGCCGAAGAACCTGGAATCTGATGTCCAAAGAGAGAAGGAGAAAAAGCGTCTTCCTCCAGAAGGGAGAGACAGAGGAGAGAGAGACAAAGAGAACGCATGTGAATACCACTTTTTCTGTCCATTTGTCCCAGCTGGTCCCCCAGCCCTTTGGAGGTGCCTGCCCACACTGAGGGCAGGTCTTCCTCTCTCAGGTAGACTCACATGCCAATCTCCTTCCTCAAGATACTCCCTC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9153:HG4_PB_pbsv_13087:HG4_Ill_Krunchall_18116:HG2_Ill_Krunchall_17800:HG4_Ill_MetaSV_1051:HG2_Ill_tnscope_1451:HG2_Ill_MetaSV_994:HG4_Ill_manta_3075:HG4_Ill_GATKHCSBGrefine_9022:HG4_10X_allpass_2466:HG2_PB_pbsv_13092:HG2_PB_SVrefine2PB10Xhap12_9445:HG2_Ill_manta_3620:HG2_Ill_breakscan11_1870:HG2_10X_allpass_2103;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9153:HG4_Ill_manta_3075:HG4_Ill_GATKHCSBGrefine_9022:HG4_10X_allpass_2466:HG2_PB_pbsv_13092:HG2_PB_SVrefine2PB10Xhap12_9445:HG2_Ill_manta_3620:HG2_Ill_breakscan11_1870:HG2_10X_allpass_2103;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00446429;ClusterMaxSizeDiff=0.00446429;ClusterMaxEditDist=0.00446927;PBcalls=3;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-447;DistBack=-650;DistForward=-447;DistMin=-650;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=12:30508188-30508634;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=751.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:20:0|1:50:0:1:16:1|0:0:23:42:1:0/1:56:18:0/1:19:4:.:.:.
chr12	32870165	HG2_Ill_SVrefine2DISCOVARplusDovetail_2682	ATATATATTTTATATATAGTATATATAGTATATATATACTATATATTATATATACACTATATATTTTATATATACTATATATTATATATACACTATATATTTTATATATACTATATATTATATATAGTATATATAATATATATACTATATATAATATATAGTATATATAATATATAATATATATTTTAAATATATACTATATATATTTTAAATATATACTATATATATTTTAAATATATAGTATATATATTATATATATATAGTATATATATATATTTTAGACGGAGTCCTGCTCTGCATAGTGTACAATTTTACCTATGGCATTTTTCAGTTACAAATATATATACCTAGGTAGATATATATATAAAAAATACATATACCTAGGTAGATATATATATAAAAAATACATA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2429:HG3_PB_assemblyticsfalcon_5498:HG3_PB_SVrefine2Falcon1Dovetail_7907:HG4_PB_assemblyticsfalcon_5388:HG4_PB_SVrefine2Falcon1Dovetail_7977:HG4_PB_pbsv_13101:HG4_Ill_GATKHCSBGrefine_9033:HG2_Ill_GATKHCSBGrefine_8767:HG2_PB_pbsv_13105:HG4_PB_SVrefine2PBcRDovetail_6570:HG4_Ill_SVrefine2DISCOVARDovetail_9328:HG2_PB_SVrefine2PB10Xhap12_9454:HG2_PB_SVrefine2Falcon2Bionano_6460:HG2_Ill_manta_3625:HG2_Ill_SVrefine2DISCOVARplusDovetail_2682:HG2_Ill_tnscope_1452:HG2_Ill_SpiralSDKrefine_3460:HG2_Ill_MetaSV_1001;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2682:HG2_Ill_manta_3625:HG2_PB_SVrefine2Falcon2Bionano_6460:HG2_PB_SVrefine2PB10Xhap12_9454:HG4_Ill_SVrefine2DISCOVARDovetail_9328:HG4_PB_SVrefine2PBcRDovetail_6570;NumExactMatchSVs=6;ClusterMaxShiftDist=0.297332;ClusterMaxSizeDiff=0.297332;ClusterMaxEditDist=0.3257;PBcalls=10;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-409;DistBack=-263;DistForward=-357;DistMin=-357;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=12:32870165-32870574;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9976;PctRecOverlap=0.9951;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=752.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:33:1:1:19:./.:0:5:10:0:0/1:46:17:0/1:48:7:.:.:.
chr12	32963599	HG3_Ill_manta_2966	TAGAATAAACATTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_5321:HG2_Ill_Krunchall_17824:HG2_PB_assemblyticsfalcon_5501:HG3_Ill_Spiral_13622:HG3_PB_pbsv_12790:HG2_PB_PB10Xdip_7106:HG2_PB_PB10Xdip_7105:HG2_Ill_breakscan11_1872:HG3_Ill_MetaSV_1100:HG2_Ill_tnscope_1453:HG4_PB_assemblyticsfalcon_5391:HG4_PB_SVrefine2Falcon1Dovetail_7978:HG3_PB_SVrefine2Falcon1Dovetail_7908:HG3_Ill_scalpel_12569:HG3_Ill_manta_2966:HG3_Ill_SVrefine2DISCOVARDovetail_9460:HG3_Ill_GATKHCSBGrefine_8651:HG3_10X_allpass_2559:HG2_PB_pbsv_13106:HG2_PB_SVrefine2PB10Xhap12_9457:HG2_PB_SVrefine2Falcon2Bionano_6461:HG2_PB_SVrefine2Falcon1plusDovetail_2430:HG2_Ill_scalpel_12341:HG2_Ill_manta_3626:HG2_Ill_MetaSV_1002:HG2_Ill_GATKHCSBGrefine_8770:HG2_10X_allpass_2105:HG2_10X_SVrefine210Xhap12_9163:HG2_PB_SVrefine2PB10Xhap12_9456:HG2_PB_SVrefine2PBcRplusDovetail_2303;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9163:HG2_10X_allpass_2105:HG2_Ill_GATKHCSBGrefine_8770:HG2_Ill_MetaSV_1002:HG2_Ill_manta_3626:HG2_Ill_scalpel_12341:HG2_PB_PB10Xdip_7106:HG4_PB_assemblyticsfalcon_5391:HG4_PB_SVrefine2Falcon1Dovetail_7978:HG3_PB_SVrefine2Falcon1Dovetail_7908:HG3_Ill_scalpel_12569:HG3_Ill_manta_2966:HG3_Ill_SVrefine2DISCOVARDovetail_9460:HG3_Ill_GATKHCSBGrefine_8651:HG3_10X_allpass_2559:HG2_PB_pbsv_13106:HG2_PB_SVrefine2PB10Xhap12_9457:HG2_PB_SVrefine2Falcon2Bionano_6461:HG2_PB_SVrefine2Falcon1plusDovetail_2430;NumExactMatchSVs=19;ClusterMaxShiftDist=0.206642;ClusterMaxSizeDiff=0.206642;ClusterMaxEditDist=0.256065;PBcalls=14;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=-11;DistForward=-299;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:32963600-32963930;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=753.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:28:0|1:21:0:0:28:0|1:31:0:0:19:0/1:35:11:0/1:28:5:.:.:.
chr12	33383770	HG4_PB_SVrefine2PBcRDovetail_6571	AGACGCAATAAAAATTGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAAGCTAGCATCAGAGAATACTACAAACTCCTCTAGGCAAATAAACTAGAAAACCTAGAAGAAATGGATAAACTCCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGATCTGAAATTGCAGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGAAATTGGTACCATTCCTTCTGAAACTATTCCAATCAACAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGAAGAACAATGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACGTCAAAAAGCTTATCTACGATGATCAAGTGGTCTTCATCCCTGGGATGCAAGGCTGGTTCAATATATGCAAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAGATAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACGGAATGGGCAAAAAGTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGCTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATCATCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTAAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATGCCTAGGAATCCAACTTACAGGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATTGTGAAAATGGCCACACTGCCTGAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTGAGCCAAAAGAGCGAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGCACTGGTACCAAAACAGAGCTATAGATCAATGGAACAGAACAGAGCCCTCAGGAATAATGCCACATATCTACAACTATCTCATCTTTGACAAACCTGAGAAAAATAAGCAATGGGGAAAGGATTCCCTATTTGATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTACATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTGAGGACATAGGCATGGGCAAGGACTTCATGTCTGAAACACCAAAAGCAATGGCAACAAAAGCCAAAAGTGACAAATGGGATCTAATTAAACCAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAGATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTGACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGACACGAGCAGACAGTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATATCATCTCACACCAGTTAGGATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAAGTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCATTATTCACAATTGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATGCACCATGGAATACTATACAGCCATAAAAAATTTTGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGACATCATCATTCTCAGTAAACTATTGCAAGGACAGAAAACCAAACACTGCACGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAATATCACACTCTGGGGCCTGTTGTGGGGTGGGGGGAGCGGGGAGGGATAGCATTAGGAAATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACATTGTGCACATGGACCCTAAAACTTAAAGTATAATAATAATATTAAAAAAATAATGTTTTGGCTCACAAAAGAAACAAAGAAGATGTCCATTTAGTAATATGTGACAAAAAGGAAACATAGTGTCTCTGAGAGGTGACCACTGAAACATTTAGTATGTTTCCTTTCACTGTTTTTCCCCTATATATCTATTTTATATAGTTCAACTCATACTACTTTAATTCTGCTTAGTATTAAGTTGGTAGAGGGCAGGGTATGTGTGGGGTGACAGTCTATGAGAATAGACCATAGGCCACATAGCATGTCTAACAGGACAGATGATTTAGGGTGGGGTCAGACCACAGAGAACTTCAAACACCACACTGTTGGGGAAACATTGTGAGGTATCCTGAGGTATCCCTTAACTTGAGAAGATTGCAACATCTGTTCTGCCCCTGCTTTCTGCCTGCTGACTTGGAGGCAAGGACTCTCTAGGGTCACCTATGCAGCAATTACTTATTAAGCCATAAGCTTGTAATATTATTTGTCTGCAGGGCTTGTTATGAAATAGTTCATTCATTTACCCTGGCACGATGGAACTGAAGATAACTCAAATAATGTTCTAGAGCAGAACTTCTATTTCTTCCAAACTACATAAACTCTGCACTTCCTTTCCTAGGACAAATACAATATGAGAGGGTATAGTGCTGGCGTTGTTGCAGGCCCACTCAGTAGCCCAATAAAACGTGCCCTAATTTTCAGCTAATTTTGTTTCTTTTGCAATGTTCTTCAATGGAGCATTTTAAGGTTTTTCCCTCTTATAATCTGGCATAAAATAATTACCTAATAAATGGTTCTACCAAAAGCAGAGATACGTAAATGATTAATGAAACTAGAATTTTAATGTTTTGATTTTGAAAATAATCAGATTGAAAATTCTAACTGGTTATAATTATAAAGCAATATCATATGCACCATGTTCTTTACAAATGTCAGTTGTTACATTAAAGTTGTATCTAGGAGATATATTTTGAATATAGATGTATGGTTTCATTTAAGGTTGTTATGGCTTGAGCATTTATTTTATTTTATTTTTGTTTGTTTTTAGACAGGGTCTCGCTCTGTCACCCAGGCTACAGTGCAGTGGCAGGATCTTGGCTCACCACAACCTCCACCTCCCAGGCTCAAGTGACTTTCCCACCTCAGCCTCCCAAGTAGCTGGGACCATAGGAAAGTGGCACCATGCCCGGCTAATTTGTTGTATTTTTGGTACAGCCGGAGTTTCACCGTGTTGCCCAGGCTACTTAATCTCCTGAGCTTAAAAAATCCATCTGCTTTGGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACTGTGCTGGGCCAGCTTGAGCATTTCTTACACTTCTAAATATATTTGGGTCAAGAGACAAACCATATTTATTATATTTGTGTAATTACTTTTCAGGAAAAGCCTGCAAGCTCTATCCTGATTACCTTCATCAATATGCAGGAAAAACAGATAGGTGCTCATAGGAGCACTTTTAAGTGAGCAATAGGAGGAAGCTACTTACTGAGATGGAGAGGCTTAAATGAATGTAATGCATGCACAGAAGCTACAGTTACTTAAAGAATAACATTTTTTGATGGTCCGAGGATACATAACATGTAATTTTTACTGACAGTTCAAGTACTTGAGACTTTAAACATCCACCTACTTTGCTGCATAATCAACTCAGTTTCATTCTTAAGCTGCAGCGTAGTTTATTATTAATATATTTCATATATATATATATATCTGCAGCAGAATGGCTTTTAATTTGTTTTTCCTAGTACAGATATATTCCTTCAGTGTTTTTTTGTAATATTCTCAAATTGGCAACCAACCAGTCAATATAAAAAAACCATTACTTGAGCTGTGTTTACTCCAGGGGGTCTGAATTGCTCTAAATCCTTTCTCTAGGGTGTCTTTGAAATCATCTTGCTATAAAATAGCTTTGATTTGATTCAAAAAATAATTCTAGTGCCAGAAACTATTAATTGCCAGGAACCTACCCATGAAAGCTCTAAGACTTTCACAGGTATTAGAACCAACTGCAGGATAAGAGCAAGATCGACATTTAATAGTAAAATTTCACAACTATTAGTTTTACCTAGTAGTCCTTTTAGGGAGCCATTTATCATTTCATTTTTTAATCCTGGTAAATAGAGGCAGGCTACACTCAAGAGACAGATAAAAGTGTCAGGAAGTCCAAATCCAATTGAGAAACTATGTTCAAGTCCACATGTTGCATTAAACTTAATTGCCAATACTTATCAATGAGAAAAATTATGTTGCAAGTTAGTTTTGATCATTGTAGGTTGAATCTGCAAGATCTGAGAAATTATCCTTTTTTATTTTTGTTTGATGCATCACATAATTAGGTTTAATTAAAAGGTCATCATGATTTTAAAGAATTTTGATTACAGGTATTCTACTCTTTGAAAGAACAGACAGTGGATTTAGGAAAAATGAGTGGAAGTTATATAAAGTTGGATTTTTGTCTCAATGTAGAGAAGTATCTTCTAACAATTACAGCTGTTAAAAAAAGGAATAGACTGACTTGTAAGATAGTAAATTTCCTGAGTTTGGAAATGCCAATCAATGGCTGAGAGATGCTGTAGGTGGAACTCCTACTTTGGAAAATCAAGCTAAATGGCTTCATGCACCCAGTGTTCCAGAAAGGCTAAGAAATATGCATAACCTTAAAAAAATTGGTTATGTACTCTGCCTCAAATGCCCTTTTTTCTTGAACTTCTACTCTTCCATTAAGACCCAGTTTAATTGCACCCTTTCTTTTTCAACAGTGTTTTTCCTTTTGTATTTTTACAGAATTTTGATGGATACATATTAAATCGTTATTTTAAGAAATTATATACTTGTTCTGTCTCTCCTGCTAGACTTTGGAGCTCTCGAAAGCAGTGCCGGCATTCTATGCGTGTTTGTATTTCTAACATTTAGCACAATGCTAGACATATCATTTGTACTTAATGGCTACCAACACAAAGCCACTGCAAATATGGTGCTAGGGCTACACATATTCTACAATATTTTATATACATTTTCTTGAGGTAGGTATTATTTGCATTTCATTGAGGACAAAACCGAAGCTCAAATTTTGCCAAAATTACCACTCTAAATAAGTGGCAGGAGCCCTGGAATCTGAATTTAGGCAGAAATAGTAGCTGAATTGCAATACCATTCATTATTTTCACTTCACAGGCTAGTTTCTTTAAGCTACTCTCTGATTTAAGATACTGTGAGTCTCACTTTAGGTTTTGATATAGTTAAGTATTTGTCCCCTCCAAATCTCATGTTGAAATGTGATTCCCAATGTTGGAGATAAGGCTTGGTGTTAGGTGTTTGGGTCATGGTGGTGGATCCCTCATGAATGGCTTGGTGCTCTCCCCGTGATAATGAGTGAATTGTCTCTGTGTGAGTCTACACAAGAGCTAGTTGTTTTAAAGAGTCTGGCACCTCATTCCCTTCTCTCTCTTGTCCCCTCTCACCATGAGATATGCTGGCTTCCTTGTTGCCTTCTGCCATGATTGTAAGCTTCCTGAGGCCTCACCAGAAGCCAAGCAGATGCTGGTGCCATGCCTGTACACCCTGTAGAACTGTGAGCCAAATAAACCTCTTTTATTTGTATATTACCCGGCCTCAGGTATTCCTTTATGGCAATGCAAATGGATTAATATAGATTTCAACTAATAAAAACTTCCAGAAACCTCATAAATCTTCTGGGGAGATCAAGTGAAACTTGTCTGGAACAATTTGACTTTTGTATTTAATAAATGACTTACACACTGAGGACAATAATCTATTCCCTTCGATGAAGAAACTCTAATAATTCCCCTTAAAAAAGTAAACTTACTTTACATAAGAGGTGATTAGAATGCCTTTAAAAACAGTAATGTGCTCTTTTTGTATACAAGTTGAATGTTTCCTTGGAATTAGTAGAGCCTTTTAAACTTCAAATTAAATTAAGTGATTCAGGAAAGAGCTATGGTTTTATTGTAACTTTTGGAGAAGACTTGTGTAAAACTTTATACATTGGCCTAGGGAGGAAAGAAGACATGCAAAGGAGGACCTCATACACCTGTTATTCTCAGAAGATACTGGATGGCATAATGGCTTGAGAGTCAAAATGATTCTATCCTCAGCAATACAAATGTAGATCACTTTAGAAGGCCAGATTGTCCAGTTTTGATATTGCTCTTTTGGGATGGCAGGAGAATTGAAAAGTCTTGAATGTCATACATGGTGTTTTGAAATTTATGGTTTAATATTTACAGGATTCTCATATATCCCTATTTCTTCTTTCTGTTTATCAGCATAAACATGTAATTGCTTCAATCAATATTATTTTGGATAATGTAATTATCTTAATTTTCTCTTTGCACTCAAAGAATGCATATTCTAAACATATTTCTCTCGTGAAGTACTATTTTCATGCACTTACTTAGTAGTTGTATTTAATGAAGTTTCTATTAATTCATTCTTGGCATGGTTTACTTCCTGACTGCCTGGAAATTGCTATTACTAAAGTTTTAGGTAAATGTTCTCTGAATGCATCTAATGTAAATTGAATATTAACAACTGATACTTTTGGCTTATATTAATTCTTTTTAATTGCCATCAGAATTGAACTGGAATGTAGACGTTAGCTCATTCTAAGCCCAGTTTTGGGGGGCTTGGAAGAAAAATTCCATGTATCACATTTTAAATGTTTCTAGTTTTCCATGCAAAACTTTAAAATGCATGTTAAATAACTTTGCTAATTATTGTGAAAAACATGTCAGTTAACCAAACTATTAAATTTCAATTATAAATGAAGTAATCCTATCTCTGCCTCTATCAGTCATCTATCTTTCCACCTATTATCTAGTGCTTTTATAAAATGACTACAAAAATGGTGCTGTATAATGCTGAAGCTAGGTCACACCTGGTGATGCAACTTCCAACAAGTTCACTGAAATAGTTGCATTTAGAGCCTTGGGCTGCCATATAAGAAGTCCAACTCCTCTAAGGTTCTAGGGAAGTCAAGACACGTGGAGTAGCCATGTGGAAATAATCCTGTCCACAGCTCCAGTTGGGCTCCCAACCAATAGCCAAGGTCTGCTTTCAGCCATATGAGTAACCCATCTTGGTCACTGACATCCAGTTGAGCCTTTGGACGATTTCAACCCCAACCAAAACTGGACTGTAATGACACAACAGAACCTGTACAAGAAACTTCCAAATGAGTCATTCTTAAATTTTTGACCCACAGAATCTATGAGCATAATAAAATAGGTATTGATACAAGGCACTGAGTTTGGGGTAGTTTGTTAGCAGTCGTTGTAATCAAACCAGTCTACATTTAACAAAGCAGAAACTAGAGAGGGAAAGCGCCAGATTTAGTACGCAGTGAAAGAAGGAAACTAACTTGATGAATATCAATACAGGCAATGATCAATTAATAAATGTGTATTTCAACATATATTTCTTAGAACATCTTTTTGAGTAGTCCTGTGCTAGACTGCACATGACCTAATGCACCTAATAGTACTGAGTAATTACTAACAAATAATTACATTACAATCTACGATTCATTACTATGGGATTTCAGAGAAAGTTGGCATAAGTTGAGGTTATTGGTGAAGTATCATTTAGGAAACAAAATTGAACAAAATTTTGAAAGATAGAATGTAGATAACTAGACAGGAGAAAGGGAGAACATTCCAGGTGGAAGACATTATGAATAAGCATGTGGAGGGCTTTAAGCATTCCCGGCTTGATAGCAGTAAGGAATTCTCTGGCCGAAGTAGACCGTTAGATTCAGTGGGGAGTGACTGCGGATTATAGAGTAGAAGAGAAGCTTGATGGTGATATTTTAGGGAGTTTTGGCTGTATGCAGAGGAAATTTGAAGTAAGATCCAGTCTTTTGGCACTTGTCTACCAATCTGAAACTTTGTCCTCTTTACACTTTTGCTTTCAACGAGTCCTAATCTGTATCTTCTATAAGCTTGGTTTAGACTTGCCTATTCTTTTTTCTTCAAAAGGTTTTGTTTGAGTTGTACCACCTTCAAACGCCTGAAAAAAAAATGTTCTATTGCTACTGTTGCTAGCTAGCTGATATAGTCAGGGTTGTCCAGAGAAACACAACCAATAAGATGTGTGTGTGTGTGCATATGTTAGAGAGAGATGTATTTTAAGCAATTTGCTGGAAAACACAAAATCTGCAAGATGGACCAGCAGGCTGGAGACTCAGGGAATCGCTGTTGCTGCAGTTCAAGTCCAAAGGCCGTCTGCTGGCAGAATTCCCTCTTGATTGAGTTGACCTTTTCTTCTCCTCTGAAAGGAAATGCTGCCTTTGGAAGAGAAAGTGGCAAAGTCATGTGAATCCAGGTTGCACATATCTTCCTGATCATGCCATGTTTTCATGCTGTCACCAAACACTAAATTTGCAGGCACCTAGATCTTGGACTTCCTAGTCTCCAGAACTGTGATAAATAAATTCCTGTTGTTTAGAAGCACTCTCATCTATGGTATTTTGTTAAGAGCAGCCAGAATGGACTAAGACAGATGATATGTTTGGCTCCGTGTCCCCACCCAAATCTCATGTGGAATTTTAATCCCCTCATGTCAGGGGAGGGACCTGGTGGGAGGTGATTGGATAACGGCGGTGGATTTCTCCCATGCTGATCTTGCGATAGTGAGTGAGTTCTCATGAGATCTCATGGTTTAAAAGTGTGGCACTTCCCCCCTTGTTCTCTCCTGCCACTGTGTCCAGAATTGGTTCCTTCTGGTGGGTTCTTGGTCTTGCTGACTTCAAGAATGAAGCTGCAGACCCTCGCGGTGAGTGTTACAGTTCTTAAAGATAGTGTGTCCAGAGTTTGTTCCTTCTAATGTTCAGATGTGTCTGGAGTTTCTTCCTTCTGGTGGGTTTGCAGTCTCGCTGACTTCAGGAGTGAAGCCGCAGACCTTTTCAGTGAGTGTTACAGCTCTTAAAGGTGGCACGTCCGGAGTTGTTCATTTCTCCCGGTGGGTTCGTGGTCTCGCTGACTTCAGGGGCGAAGCTGCAGACCTTTGCGGTGAGTGTTACAACTCTTAAAGGTGGCATGTCCAGAGTTGTTCATTCTTCCTAGTGGGTTTGCGGTCTTGCTGACTTCAGGGGTGAAGCTGCAGACCTTCGCGGTGAGTGTTATAGCTCTTAAAGGTGGCACGCCTGGAGTTGTTCATTCCTCCCGGTGGGTTTGCAGTCTCACTAGCTTCAGGAGTGAAGCTGCAGACCTTCACGGTGAATGTTACAGCTCATAAAGGCGGCACAGACCCAAAGAATGAGCAGCAGCAAGATTTATTGCAAACAGCAAAAGAACAAAGCTTCCACAGCATGGAAGGGGACCAAGTGGGTTGCTGCTACTAGCTCAGATGGCCTGCTTTTATTCCCTTATTTGGCACTGCCCACATCTTGCTGATTGGTCCATTTTACAGAGAGCAGATTGGTCCATTTTACAGAGTGCTGATTGGTTCATTTTGACAGAGTGCTGATTGGTGCATTTACAAAGCTTTAGCTAGACACAGAGCGCTGATTGGTGCAATTACAATCCTTTAGCTAGACAGAAAAGTTCTCCAAATCCCCACCCAATTATCCAGACACAGAGTGCTGATTGGTGCATTTACAAACCTTTAGCTAGACACAGAGTGCTGATTGGTGCATTTACAATCCCTTAGCTAGACAGAAAAGTTCTCCAAGTCCCCACCTGACCCAGAAGCCCAGCCAGCTTCACCTGTCAACACCATATAAGACATGCTTTGCTTCCCCTTTGCCTTCTGCCATGTTTGTAAGTTTCCTGAATCTTCCCCAGCCTTGTGGAACTGTGAGTCAGTTAAACCTCTTCTTTATAAATTACTCAGTCTTGGGTAGTTCTTTATGGCATTGCGAAAACAGACTAATACAACAGGAAACAAGAGGACCTCTGTTTCAGCCTTATTTGCTGCTCATTCTGTCTATTCATAGGCAATTCTTTACAGTTTTTACTTATTTGTTCTGATATTTATTTTCTTATTTCTAAAATGCTCATGCTACCATTTCTTGACTTTTTAGTTTTAGACATTACTTGTTGACTTTGAAGTAAGAAATGTAAGAATTTAGGCCCTCTTCACCTCTTATCATTGCATAATTGTAAAACATGATTAGATTTTACATTATTAAGACTAAATATTAATCTGAGCTACACCACATAATGAAGTGACATGATATGATTACCTTTCCATTTTTGAACAGTTTATATTGTTATGCCCTGTTTTGGGAATTAATATTGATGATTTTTGGCATTCATTTAATTAACCGTGTACTTGCCACTATCATACATCCTTAATTTCTCTACCAGAAGTGTGTACCTGATGTTAAAACCCTCAGATAATGTTTAATTTAAAATATCCATAATCTGCTAATCTGTGATCAACTCCAATCTGTACTAGTTGTTTTCTAAAACTGCAATTCTCCTGACATCATGGTGCCTTACATCTCTGTCATCCTAGAAGTTCCTCTGCATATTGCATTTTCTCTTTTCTGGTACACTGGAGGTAAAATTTTTGAGATCTTGCATGCTAAAGATGTCTTAATTCTATCCTCAGACATAACTGATAGTTGGGTTAGATTCAGAAGTCTAGTTTGGATATCATTTTACTAAGAATTTTTGAAGGCATTGCTGCATTTTATCCAATATGTATTTTTCTCTTGTGTGGTACCGTATTGATTTTCATTCCATCATGAGTGATTTTTGTTTGTTTGTTTATTTTTTCCTTCTCTGGAAACTTTTAAGATGTTATATTTGTTCCCAGTGTTTCACAAAGTGAAATTTCACATTGAAGTGGCTTTATATTGGAGGAAATAAAAATATTTTACCCCAAAACATATTTCTTTTTTTATTATTATTATACTTTAAGTTTTAGGGTACGTGTGCACAATGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGACATCTAGCATTAGGTATATCTCCCAATGCTATCCCTACCCCCTCCCCCCACCCCACAACAGGCCCGAGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTATATATGTGCCACATTTTCTTAATCCAGTCTATCATTATTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCTGCAATAAACATGCGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCCTTTGGGTATATGCCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATTGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACACTGTAAAAGGGTTCTTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCAATGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGTGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGCCCTTCACCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTCAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTATAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTCAGACATGAAGTCCTTGCCCATGGCTATGTCCTGAATGGTAAAGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGTTGTAAGGAAGGGATCCAGTTTCCGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAACAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGACGTTATTCCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAATACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTATGATGCCTCCAGCTTTGTTCTTTTGACTTAGGATT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2431:HG2_10X_allpass_2106:HG4_10X_allpass_2467:HG2_PB_HySA_23831:HG4_Ill_MetaSV_1056:HG2_Ill_MetaSV_1003:HG2_PB_pbsv_13110:HG4_PB_SVrefine2PBcRDovetail_6571:HG2_PB_pbsv_13109:HG2_PB_SVrefine2PBcRplusDovetail_2304:HG2_PB_SVrefine2PB10Xhap12_9458:HG2_PB_SVrefine2Falcon2Bionano_6463;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2431:HG4_PB_SVrefine2PBcRDovetail_6571:HG2_PB_pbsv_13109:HG2_PB_SVrefine2PBcRplusDovetail_2304:HG2_PB_SVrefine2PB10Xhap12_9458:HG2_PB_SVrefine2Falcon2Bionano_6463;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0102611;ClusterMaxSizeDiff=0.0102611;ClusterMaxEditDist=0.0141375;PBcalls=8;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=1;SVLEN=-13223;DistBack=19420;DistForward=-11829;DistMin=-11829;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1370;REFWIDENED=12:33383771-33398363;PctSeqSimilarity=0.9674;PctSizeSimilarity=0.9979;PctRecOverlap=0.8991;SizeDiff=28;StartDistance=-1334;EndDistance=-1306;GTMatch=0;TruScore=95;MatchId=754.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:47:26:0|1:48:1:5:23:0/0:12:1:87:0:0/0:69:0:0/1:460:286:12990:.:.
chr12	33740850	HG2_Ill_SVrefine2DISCOVARplusDovetail_2683	GCTTTTGTTGCCCAAGGCAATGTCTACATGACATAGCTGAATTCCTATTACCGGCTGCAGGGCCTATGTGACTTAGCTGGACCCCTACCCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9164:HG4_PB_HySA_19064:HG2_PB_pbsv_13111:HG2_PB_HySA_23834:HG4_PB_pbsv_13105:HG4_Ill_GATKHC_20944:HG4_Ill_GATKHCSBGrefine_9037:HG2_Ill_GATKHC_20964:HG2_Ill_GATKHCSBGrefine_8771:HG4_PB_SVrefine2PBcRDovetail_6572:HG2_PB_assemblyticsfalcon_5505:HG2_PB_SVrefine2PBcRplusDovetail_2305:HG2_PB_SVrefine2PB10Xhap12_9459:HG2_PB_SVrefine2Falcon1plusDovetail_2432:HG2_Ill_SVrefine2DISCOVARplusDovetail_2683:HG2_10X_SVrefine210Xhap12_9165:HG2_PB_assemblyticsPBcR_5325:HG4_Ill_Krunchall_18147:HG4_Ill_250bpfermikitraw_17321:HG4_10X_allpass_2470:HG2_Ill_Krunchall_17828:HG2_Ill_250bpfermikitraw_17491;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9165:HG2_Ill_SVrefine2DISCOVARplusDovetail_2683:HG2_PB_SVrefine2Falcon1plusDovetail_2432:HG2_PB_SVrefine2PB10Xhap12_9459:HG2_PB_SVrefine2PBcRplusDovetail_2305:HG2_PB_assemblyticsfalcon_5505:HG4_PB_SVrefine2PBcRDovetail_6572;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0813954;ClusterMaxSizeDiff=0.079096;ClusterMaxEditDist=0.151163;PBcalls=10;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-91;DistBack=25726;DistForward=70617;DistMin=25726;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=182;REFWIDENED=12:33740806-33741078;PctSeqSimilarity=0.9823;PctSizeSimilarity=0.989;PctRecOverlap=0.9239;SizeDiff=1;StartDistance=6;EndDistance=7;GTMatch=0;TruScore=96;MatchId=755.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:40:0|1:25:0:2:34:1|0:0:8:8:0:0/1:16:13:./.:.:.:.:.:.
chr12	34039183	HG4_Ill_150bpfermikitraw_16663	TTATATCTATATATAATATCGATATTATATCTATATATAATATCGATATAATATCTATATATTATCGA	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_16465:HG4_PB_pbsv_13107:HG4_PB_assemblyticsfalcon_5397:HG4_Ill_svaba_16361:HG4_Ill_manta_3081:HG4_Ill_Krunchall_18151:HG4_Ill_GATKHC_20948:HG4_Ill_GATKHCSBGrefine_9039:HG4_Ill_250bpfermikitraw_17324:HG4_Ill_150bpfermikitraw_16663:HG2_PB_pbsv_13112:HG2_PB_assemblyticsfalcon_5506:HG2_Ill_svaba_16306:HG2_Ill_Krunchall_17829:HG2_Ill_GATKHC_20965:HG2_Ill_GATKHCSBGrefine_8772:HG2_Ill_250bpfermikitraw_17492;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16465:HG4_PB_assemblyticsfalcon_5397:HG4_Ill_svaba_16361:HG4_Ill_manta_3081:HG4_Ill_Krunchall_18151:HG4_Ill_GATKHC_20948:HG4_Ill_GATKHCSBGrefine_9039:HG4_Ill_250bpfermikitraw_17324:HG4_Ill_150bpfermikitraw_16663:HG2_PB_pbsv_13112:HG2_PB_assemblyticsfalcon_5506:HG2_Ill_svaba_16306:HG2_Ill_Krunchall_17829:HG2_Ill_GATKHC_20965:HG2_Ill_GATKHCSBGrefine_8772:HG2_Ill_250bpfermikitraw_17492;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0451128;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.0451128;PBcalls=4;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-67;DistBack=-93;DistForward=-43;DistMin=-93;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=42;REFWIDENED=12:34039182-34039293;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=756.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:26:./.:18:18:15:7:./.:0:11:19:2:0/1:30:14:./.:.:.:.:.:.
chr12	34586928	HG3_Ill_GATKHC_20819	TAGAGGAAAATTATAGCACTAAATGCACACAAGAGAAAGCCAGAAAGATCCAAAATTGACATCCTAACATCACAATTAAAAGAACTAGAAA	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_16469:HG3_PB_assemblyticsfalcon_5508:HG2_PB_assemblyticsfalcon_5510:HG3_PB_HySA_19747:HG3_PB_pbsv_12798:HG3_PB_SVrefine2PBcRDovetail_6169:HG3_PB_SVrefine2Falcon1Dovetail_7916:HG3_Ill_svaba_16440:HG3_Ill_scalpel_12573:HG3_Ill_manta_2968:HG3_Ill_SVrefine2DISCOVARDovetail_9465:HG3_Ill_Krunchall_17480:HG3_Ill_GATKHC_20819:HG3_Ill_GATKHCSBGrefine_8654:HG3_Ill_250bpfermikitraw_16980:HG3_Ill_150bpfermikitraw_16498:HG3_10X_allpass_2562:HG2_PB_pbsv_13118:HG2_PB_SVrefine2Falcon1plusDovetail_2434:HG2_Ill_svaba_16312:HG2_Ill_manta_3628:HG2_Ill_Krunchall_17831:HG2_Ill_GATKHC_20966:HG2_Ill_GATKHCSBGrefine_8775:HG2_Ill_250bpfermikitraw_17495;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16469:HG3_PB_pbsv_12798:HG3_PB_SVrefine2PBcRDovetail_6169:HG3_PB_SVrefine2Falcon1Dovetail_7916:HG3_Ill_svaba_16440:HG3_Ill_scalpel_12573:HG3_Ill_manta_2968:HG3_Ill_SVrefine2DISCOVARDovetail_9465:HG3_Ill_Krunchall_17480:HG3_Ill_GATKHC_20819:HG3_Ill_GATKHCSBGrefine_8654:HG3_Ill_250bpfermikitraw_16980:HG3_Ill_150bpfermikitraw_16498:HG3_10X_allpass_2562:HG2_PB_pbsv_13118:HG2_PB_SVrefine2Falcon1plusDovetail_2434:HG2_Ill_svaba_16312:HG2_Ill_manta_3628:HG2_Ill_Krunchall_17831:HG2_Ill_GATKHC_20966:HG2_Ill_GATKHCSBGrefine_8775:HG2_Ill_250bpfermikitraw_17495;NumExactMatchSVs=22;ClusterMaxShiftDist=0.010929;ClusterMaxSizeDiff=0.010929;ClusterMaxEditDist=0.010989;PBcalls=8;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=15;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-90;DistBack=44435;DistForward=23385;DistMin=23385;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:34586929-34587020;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:22:./.:20:6:6:16:0|1:27:0:0:16:0/1:36:16:./.:.:.:.:.:.
chr12	34632672	HG3_Ill_svaba_16441	ATACCAGGAAGAAGTCGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGCTTACCAAGGAAAAGAGTCCAGGACCAGGTGGATTCATAGCCCAATTCTACCAGAGGTACAAGGAGGAACTGG	A	20	PASS	ClusterIDs=HG2_10X_allpass_2109:HG3_Ill_Krunchall_17482:HG2_Ill_Krunchall_17832:HG4_PB_assemblyticsfalcon_5403:HG3_PB_pbsv_12799:HG3_Ill_Krunchall_17481:HG3_PB_assemblyticsfalcon_5509:HG4_PB_SVrefine2Falcon1Dovetail_7984:HG3_PB_SVrefine2PBcRDovetail_6170:HG3_PB_SVrefine2Falcon1Dovetail_7917:HG3_Ill_svaba_16441:HG3_Ill_scalpel_12574:HG3_Ill_SVrefine2DISCOVARDovetail_9466:HG3_Ill_GATKHCSBGrefine_8655:HG3_10X_allpass_2563:HG2_PB_pbsv_13119:HG2_PB_SVrefine2PB10Xhap12_9466:HG2_Ill_svaba_16313:HG2_Ill_scalpel_12347:HG2_Ill_manta_3629:HG2_Ill_SVrefine2DISCOVARplusDovetail_2687:HG2_Ill_MetaSV_1007:HG2_Ill_GATKHCSBGrefine_8776;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_2109:HG4_PB_SVrefine2Falcon1Dovetail_7984:HG3_PB_SVrefine2PBcRDovetail_6170:HG3_PB_SVrefine2Falcon1Dovetail_7917:HG3_Ill_svaba_16441:HG3_Ill_scalpel_12574:HG3_Ill_SVrefine2DISCOVARDovetail_9466:HG3_Ill_GATKHCSBGrefine_8655:HG3_10X_allpass_2563:HG2_PB_pbsv_13119:HG2_PB_SVrefine2PB10Xhap12_9466:HG2_Ill_svaba_16313:HG2_Ill_scalpel_12347:HG2_Ill_manta_3629:HG2_Ill_SVrefine2DISCOVARplusDovetail_2687:HG2_Ill_MetaSV_1007:HG2_Ill_GATKHCSBGrefine_8776;NumExactMatchSVs=17;ClusterMaxShiftDist=0.00706714;ClusterMaxSizeDiff=0.00706714;ClusterMaxEditDist=0.0141343;PBcalls=8;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-141;DistBack=22267;DistForward=-136;DistMin=-136;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=12:34632673-34632818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=758.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:11:./.:17:1:7:13:0|1:33:0:0:19:0/1:25:22:./.:.:.:.:.:.
chr12	39384257	HG2_PB_SVrefine2PBcRplusDovetail_2313	TAACAAACTGTCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAAAACCACTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAATGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGCAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_13131:HG3_PB_SVrefine2PBcRDovetail_6173:HG3_Ill_Krunchall_17492:HG4_Ill_MetaSV_1073:HG3_Ill_MetaSV_1105:HG2_Ill_tnscope_1457:HG4_PB_SVrefine2PBcRDovetail_6577:HG3_PB_pbsv_12803:HG2_PB_pbsv_13130:HG2_PB_SVrefine2PBcRplusDovetail_2313:HG2_PB_SVrefine2PB10Xhap12_9479:HG2_PB_SVrefine2Falcon2Bionano_6477:HG2_PB_SVrefine2Falcon1plusDovetail_2443:HG2_Ill_MetaSV_1012:HG2_Ill_GATKHCSBGrefine_8779:HG2_10X_SVrefine210Xhap12_9170;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9170:HG2_Ill_GATKHCSBGrefine_8779:HG2_Ill_MetaSV_1012:HG2_PB_SVrefine2Falcon1plusDovetail_2443:HG2_PB_SVrefine2Falcon2Bionano_6477:HG2_PB_SVrefine2PB10Xhap12_9479:HG2_PB_SVrefine2PBcRplusDovetail_2313:HG2_PB_pbsv_13130:HG3_PB_pbsv_12803:HG4_PB_SVrefine2PBcRDovetail_6577;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0612245;ClusterMaxSizeDiff=0.0612245;ClusterMaxEditDist=0.0612245;PBcalls=9;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=6001;DistForward=-337;DistMin=-337;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:39384258-39384598;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=759.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:37:0|1:26:1:1:32:./.:12:23:49:0:0/1:67:12:0/1:31:9:.:.:.
chr12	40006889	HG2_PB_SVrefine2Falcon1plusDovetail_2445	TAAAGAATTGAGGTTGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_890:HG2_Ill_Krunchall_17845:HG2_PB_assemblyticsPBcR_5344:HG4_PB_pbsv_13135:HG2_PB_pbsv_13135:HG2_PB_PB10Xdip_7433:HG2_PB_SVrefine2PB10Xhap12_9486:HG4_Ill_MetaSV_1076:HG2_Ill_tnscope_1460:HG2_Ill_MetaSV_1015:HG4_Ill_manta_3085:HG4_Ill_GATKHCSBGrefine_9050:HG4_10X_allpass_2480:HG2_PB_SVrefine2PBcRplusDovetail_2316:HG2_PB_SVrefine2PB10Xhap12_9485:HG2_PB_SVrefine2Falcon1plusDovetail_2445:HG2_Ill_manta_3634:HG2_Ill_GATKHCSBGrefine_8782:HG2_10X_allpass_2112:HG2_10X_SVrefine210Xhap12_9172:HG2_Ill_breakscan11_1876:HG4_Ill_Spiral_1032;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9172:HG2_10X_allpass_2112:HG2_Ill_GATKHCSBGrefine_8782:HG2_Ill_manta_3634:HG2_PB_SVrefine2Falcon1plusDovetail_2445:HG2_PB_SVrefine2PB10Xhap12_9485:HG2_PB_SVrefine2PBcRplusDovetail_2316:HG4_10X_allpass_2480:HG4_Ill_GATKHCSBGrefine_9050:HG4_Ill_manta_3085;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0965732;ClusterMaxSizeDiff=0.0965732;ClusterMaxEditDist=0.0965732;PBcalls=8;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=95580;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:40006890-40007232;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=760.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:52:0|1:26:2:1:45:0|1:33:1:0:35:0/1:21:20:./.:25:3:.:.:.
chr12	40864969	HG2_PB_SVrefine2PB10Xhap12_9490	GAGAAGGAGTGAGATCCTATCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAATCAAATAAAGTAAATTTCTTCTGTAATGTTCCATTTGAGTGAGAAATATATATATAAACTT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_13144:HG4_Ill_MetaSV_1079:HG2_PB_HySA_23876:HG4_PB_SVrefine2PBcRDovetail_6581:HG4_PB_SVrefine2Falcon1Dovetail_7996:HG4_Ill_svaba_16396:HG4_Ill_scalpel_12071:HG4_Ill_manta_3089:HG4_Ill_SVrefine2DISCOVARDovetail_9348:HG4_Ill_GATKHCSBGrefine_9054:HG4_CG_vcfBeta_8335:HG4_10X_allpass_2481:HG3_PB_pbsv_12813:HG3_PB_SVrefine2PBcRDovetail_6176:HG3_PB_SVrefine2Falcon1Dovetail_7928:HG3_Ill_svaba_16466:HG3_Ill_scalpel_12597:HG3_Ill_manta_2971:HG3_Ill_SVrefine2DISCOVARDovetail_9474:HG3_Ill_MetaSV_1109:HG3_Ill_GATKHCSBGrefine_8664:HG3_CG_vcfBeta_7078:HG3_10X_allpass_2565:HG2_PB_pbsv_13142:HG2_PB_assemblyticsfalcon_5541:HG2_PB_SVrefine2PBcRplusDovetail_2320:HG2_PB_SVrefine2PB10Xhap12_9490:HG2_PB_SVrefine2Falcon2Bionano_6482:HG2_PB_SVrefine2Falcon1plusDovetail_2449:HG2_Ill_svaba_16337:HG2_Ill_scalpel_12367:HG2_Ill_manta_3637:HG2_Ill_SpiralSDKrefine_3481:HG2_Ill_SVrefine2DISCOVARplusDovetail_2700:HG2_Ill_MetaSV_1016:HG2_Ill_GATKHCSBGrefine_8786:HG2_Ill_250bpfermikitraw_17523:HG2_Ill_150bpfermikitraw_16496:HG2_CG_vcfBeta_7431:HG2_10X_SVrefine210Xhap12_9176:HG4_PB_assemblyticsfalcon_5441:HG3_PB_assemblyticsfalcon_5542:HG2_PB_assemblyticsPBcR_5359:HG4_Ill_Krunchall_18192:HG3_Ill_Krunchall_17507:HG2_Ill_breakscan11_1877:HG3_PB_HySA_19783;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9176:HG2_CG_vcfBeta_7431:HG2_Ill_150bpfermikitraw_16496:HG2_Ill_250bpfermikitraw_17523:HG2_Ill_GATKHCSBGrefine_8786:HG2_Ill_MetaSV_1016:HG2_Ill_SVrefine2DISCOVARplusDovetail_2700:HG2_Ill_SpiralSDKrefine_3481:HG2_Ill_manta_3637:HG2_Ill_scalpel_12367:HG2_Ill_svaba_16337:HG2_PB_SVrefine2Falcon1plusDovetail_2449:HG2_PB_SVrefine2Falcon2Bionano_6482:HG2_PB_SVrefine2PB10Xhap12_9490:HG2_PB_SVrefine2PBcRplusDovetail_2320:HG2_PB_assemblyticsfalcon_5541:HG2_PB_pbsv_13142:HG3_10X_allpass_2565:HG3_CG_vcfBeta_7078:HG3_Ill_GATKHCSBGrefine_8664:HG3_Ill_MetaSV_1109:HG3_Ill_SVrefine2DISCOVARDovetail_9474:HG3_Ill_manta_2971:HG3_Ill_scalpel_12597:HG3_Ill_svaba_16466:HG3_PB_SVrefine2Falcon1Dovetail_7928:HG3_PB_SVrefine2PBcRDovetail_6176:HG3_PB_pbsv_12813:HG4_10X_allpass_2481:HG4_CG_vcfBeta_8335:HG4_Ill_GATKHCSBGrefine_9054:HG4_Ill_SVrefine2DISCOVARDovetail_9348:HG4_Ill_manta_3089:HG4_Ill_scalpel_12071:HG4_Ill_svaba_16396:HG4_PB_SVrefine2Falcon1Dovetail_7996:HG4_PB_SVrefine2PBcRDovetail_6581;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0242915;ClusterMaxSizeDiff=0.0242915;ClusterMaxEditDist=0.0323887;PBcalls=17;Illcalls=24;TenXcalls=3;CGcalls=3;PBexactcalls=11;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=3;HG2count=20;HG3count=14;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-122;DistBack=22525;DistForward=7078;DistMin=7078;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=12:40864970-40865092;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=761.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:78:1/1:1:16:2:30:1/1:0:15:0:18:1/1:0:20:./.:.:.:.:7918:.
chr12	41167438	HG2_PB_SVrefine2PB10Xhap12_9494	TATATATATATATATATATACACATATATATATATATACACATATATATATATATATACAC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2453:HG4_PB_pbsv_13150:HG4_PB_HySA_19129:HG4_Ill_svaba_16405:HG4_Ill_scalpel_12079:HG4_Ill_Krunchall_18201:HG4_Ill_GATKHC_20994:HG4_Ill_GATKHCSBGrefine_9057:HG4_Ill_250bpfermikitraw_17368:HG4_Ill_150bpfermikitraw_16703:HG2_PB_HySA_23884:HG4_PB_SVrefine2PBcRDovetail_6584:HG3_PB_pbsv_12818:HG2_PB_pbsv_13146:HG3_PB_HySA_19789:HG4_Ill_svaba_16404:HG4_Ill_scalpel_12078:HG4_Ill_SVrefine2DISCOVARDovetail_9351:HG4_Ill_Krunchall_18200:HG4_Ill_GATKHC_20993:HG4_Ill_GATKHCSBGrefine_9056:HG4_Ill_250bpfermikitraw_17367:HG4_Ill_150bpfermikitraw_16702:HG3_PB_SVrefine2PBcRDovetail_6181:HG3_Ill_svaba_16475:HG3_Ill_scalpel_12602:HG3_Ill_manta_2974:HG3_Ill_SVrefine2DISCOVARDovetail_9476:HG3_Ill_Krunchall_17517:HG3_Ill_GATKHC_20861:HG3_Ill_GATKHCSBGrefine_8666:HG3_Ill_250bpfermikitraw_17027:HG3_Ill_150bpfermikitraw_16537:HG2_PB_SVrefine2PBcRplusDovetail_2324:HG2_PB_SVrefine2PB10Xhap12_9494:HG2_PB_SVrefine2Falcon2Bionano_6486:HG2_Ill_svaba_16344:HG2_Ill_scalpel_12372:HG2_Ill_manta_3639:HG2_Ill_SpiralSDKrefine_3485:HG2_Ill_SVrefine2DISCOVARplusDovetail_2703:HG2_Ill_Krunchall_17863:HG2_Ill_GATKHC_21002:HG2_Ill_GATKHCSBGrefine_8793:HG2_Ill_250bpfermikitraw_17528:HG2_Ill_150bpfermikitraw_16502:HG2_10X_SVrefine210Xhap12_9179:HG4_PB_SVrefine2Falcon1Dovetail_8000:HG3_PB_SVrefine2Falcon1Dovetail_7932;NumClusterSVs=49;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9179:HG2_Ill_150bpfermikitraw_16502:HG2_Ill_250bpfermikitraw_17528:HG2_Ill_GATKHCSBGrefine_8793:HG2_Ill_GATKHC_21002:HG2_Ill_Krunchall_17863:HG2_Ill_SVrefine2DISCOVARplusDovetail_2703:HG2_Ill_SpiralSDKrefine_3485:HG2_Ill_manta_3639:HG2_Ill_scalpel_12372:HG2_Ill_svaba_16344:HG2_PB_SVrefine2Falcon2Bionano_6486:HG2_PB_SVrefine2PB10Xhap12_9494:HG2_PB_SVrefine2PBcRplusDovetail_2324:HG3_Ill_150bpfermikitraw_16537:HG3_Ill_250bpfermikitraw_17027:HG3_Ill_GATKHCSBGrefine_8666:HG3_Ill_GATKHC_20861:HG3_Ill_Krunchall_17517:HG3_Ill_SVrefine2DISCOVARDovetail_9476:HG3_Ill_manta_2974:HG3_Ill_scalpel_12602:HG3_Ill_svaba_16475:HG3_PB_SVrefine2PBcRDovetail_6181:HG4_Ill_150bpfermikitraw_16702:HG4_Ill_250bpfermikitraw_17367:HG4_Ill_GATKHCSBGrefine_9056:HG4_Ill_GATKHC_20993:HG4_Ill_Krunchall_18200:HG4_Ill_SVrefine2DISCOVARDovetail_9351:HG4_Ill_scalpel_12078:HG4_Ill_svaba_16404;NumExactMatchSVs=32;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.117647;PBcalls=14;Illcalls=34;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=19;NumTechs=3;NumTechsExact=3;SVLEN=-60;DistBack=5618;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=12:41167439-41167534;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=762.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:81:1/1:1:9:0:9:1/1:0:9:0:11:1/1:0:55:./.:.:.:.:.:.
chr12	41183195	HG3_Ill_SVrefine2DISCOVARDovetail_9477	GAAAACAACCTAAAGAAATTGAAATTTGAATTCTGAATCTCCACTGATACTGACAAGGGAACAGGCAAGTCATTTAGTGATCCTTATTTGGCAAAAAGGGGATGACAATGAAAAGATCATTATAAGGATTACAGAAAATACATGCATGCTGTGCTGTGATAGGAACTCTTTAATTTAAAAAATGCACACACATGTTGAAAAAGTTGGAAAATAAAAGAAATAACTCATAATCTCATATCTCATGGATAAGCTTTTGTTAACATTTTGAGATATTTTGAGTTCATATATACCTAAATTTTAATATCCT	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1879:HG2_PB_HySA_23885:HG4_PB_HySA_19130:HG4_Ill_Krunchall_18203:HG2_Ill_Krunchall_17864:HG4_Ill_MetaSV_1082:HG3_Ill_MetaSV_1111:HG2_Ill_tnscope_1461:HG2_Ill_MetaSV_1017:HG4_PB_pbsv_13151:HG4_PB_SVrefine2PBcRDovetail_6585:HG4_PB_SVrefine2Falcon1Dovetail_8001:HG4_Ill_svaba_16406:HG4_Ill_scalpel_12080:HG4_Ill_manta_3090:HG4_Ill_SVrefine2DISCOVARDovetail_9352:HG4_Ill_GATKHCSBGrefine_9058:HG4_Ill_Cortex_745:HG4_10X_allpass_2484:HG3_PB_SVrefine2PBcRDovetail_6182:HG3_PB_SVrefine2Falcon1Dovetail_7933:HG3_Ill_svaba_16476:HG3_Ill_scalpel_12603:HG3_Ill_manta_2975:HG3_Ill_SVrefine2DISCOVARDovetail_9477:HG3_Ill_GATKHCSBGrefine_8667:HG3_Ill_Cortex_789:HG3_10X_allpass_2567:HG2_PB_pbsv_13147:HG2_PB_assemblyticsfalcon_5552:HG2_PB_SVrefine2PBcRplusDovetail_2325:HG2_PB_SVrefine2PB10Xhap12_9495:HG2_PB_SVrefine2Falcon2Bionano_6487:HG2_PB_SVrefine2Falcon1plusDovetail_2454:HG2_Ill_svaba_16345:HG2_Ill_scalpel_12373:HG2_Ill_manta_3640:HG2_Ill_SpiralSDKrefine_3486:HG2_Ill_SVrefine2DISCOVARplusDovetail_2704:HG2_Ill_GATKHCSBGrefine_8794:HG2_Ill_Cortex_1824:HG2_10X_allpass_2113:HG2_10X_SVrefine210Xhap12_9180:HG4_PB_assemblyticsfalcon_5455:HG3_PB_assemblyticsfalcon_5554:HG2_PB_assemblyticsPBcR_5369:HG4_Ill_Krunchall_18202:HG3_PB_pbsv_12819;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9180:HG2_10X_allpass_2113:HG2_Ill_Cortex_1824:HG2_Ill_GATKHCSBGrefine_8794:HG2_Ill_SVrefine2DISCOVARplusDovetail_2704:HG2_Ill_SpiralSDKrefine_3486:HG2_Ill_manta_3640:HG2_Ill_scalpel_12373:HG2_Ill_svaba_16345:HG2_PB_SVrefine2Falcon1plusDovetail_2454:HG2_PB_SVrefine2Falcon2Bionano_6487:HG2_PB_SVrefine2PB10Xhap12_9495:HG2_PB_SVrefine2PBcRplusDovetail_2325:HG2_PB_assemblyticsfalcon_5552:HG2_PB_pbsv_13147:HG3_10X_allpass_2567:HG3_Ill_Cortex_789:HG3_Ill_GATKHCSBGrefine_8667:HG3_Ill_SVrefine2DISCOVARDovetail_9477:HG3_Ill_manta_2975:HG3_Ill_scalpel_12603:HG3_Ill_svaba_16476:HG3_PB_SVrefine2Falcon1Dovetail_7933:HG3_PB_SVrefine2PBcRDovetail_6182:HG4_10X_allpass_2484:HG4_Ill_Cortex_745:HG4_Ill_GATKHCSBGrefine_9058:HG4_Ill_SVrefine2DISCOVARDovetail_9352:HG4_Ill_manta_3090:HG4_Ill_scalpel_12080:HG4_Ill_svaba_16406:HG4_PB_SVrefine2Falcon1Dovetail_8001:HG4_PB_SVrefine2PBcRDovetail_6585:HG4_PB_pbsv_13151;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0097561;ClusterMaxSizeDiff=0.0097561;ClusterMaxEditDist=0.0097561;PBcalls=17;Illcalls=27;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=19;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=12;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=15696;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=12:41183196-41183502;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=763.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:74:1/1:0:18:0:18:1/1:0:32:0:17:1/1:0:46:./.:1:10:.:.:.
chr12	41659816	HG2_10X_SVrefine210Xhap12_9181	TAAAATGAGATATTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1880:HG3_10X_allpass_2568:HG4_Ill_Krunchall_18207:HG2_PB_pbsv_13149:HG2_Ill_Krunchall_17868:HG2_PB_assemblyticsfalcon_5555:HG2_PB_assemblyticsPBcR_5372:HG4_Ill_Spiral_1033:HG3_Ill_Spiral_13664:HG2_Ill_Spiral_891:HG4_PB_pbsv_13153:HG3_PB_pbsv_12821:HG4_Ill_MetaSV_1083:HG3_Ill_MetaSV_1112:HG2_PB_HySA_23889:HG2_Ill_tnscope_1462:HG2_Ill_MetaSV_1018:HG4_PB_SVrefine2Falcon1Dovetail_8002:HG4_Ill_manta_3091:HG4_Ill_GATKHCSBGrefine_9060:HG3_PB_SVrefine2Falcon1Dovetail_7934:HG3_Ill_manta_2976:HG3_Ill_GATKHCSBGrefine_8669:HG2_PB_SVrefine2PBcRplusDovetail_2326:HG2_PB_SVrefine2PB10Xhap12_9496:HG2_PB_SVrefine2Falcon2Bionano_6488:HG2_PB_SVrefine2Falcon1plusDovetail_2455:HG2_Ill_scalpel_12376:HG2_Ill_manta_3641:HG2_Ill_SVrefine2DISCOVARplusDovetail_2705:HG2_Ill_GATKHCSBGrefine_8796:HG2_10X_allpass_2114:HG2_10X_SVrefine210Xhap12_9181;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9181:HG2_10X_allpass_2114:HG2_Ill_GATKHCSBGrefine_8796:HG2_Ill_SVrefine2DISCOVARplusDovetail_2705:HG2_Ill_manta_3641:HG2_Ill_scalpel_12376:HG2_PB_SVrefine2Falcon1plusDovetail_2455:HG2_PB_SVrefine2Falcon2Bionano_6488:HG2_PB_SVrefine2PB10Xhap12_9496:HG2_PB_SVrefine2PBcRplusDovetail_2326:HG3_Ill_GATKHCSBGrefine_8669:HG3_Ill_manta_2976:HG3_PB_SVrefine2Falcon1Dovetail_7934:HG4_Ill_GATKHCSBGrefine_9060:HG4_Ill_manta_3091:HG4_PB_SVrefine2Falcon1Dovetail_8002;NumExactMatchSVs=16;ClusterMaxShiftDist=0.132283;ClusterMaxSizeDiff=0.132283;ClusterMaxEditDist=0.132283;PBcalls=12;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=10964;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=12:41659817-41660148;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=764.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:76:1/1:5:30:0:40:1/1:0:27:0:24:1/1:0:34:./.:1:12:.:.:.
chr12	42238053	HG4_PB_SVrefine2Falcon1Dovetail_8004	AGATGCTACATATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTATTTTTTTTTTATTTTATTTTATTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATACTATCCCTCCCCCCTCCCCCAACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCAGCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATG	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1882:HG4_Ill_Krunchall_18216:HG3_Ill_Krunchall_17532:HG2_Ill_Krunchall_17878:HG4_PB_assemblyticsfalcon_5467:HG3_PB_assemblyticsfalcon_5568:HG2_PB_assemblyticsfalcon_5567:HG4_PB_pbsv_13157:HG2_PB_pbsv_13153:HG2_Ill_tnscope_1463:HG4_PB_SVrefine2PBcRDovetail_6587:HG4_PB_SVrefine2Falcon1Dovetail_8004:HG4_Ill_manta_3094:HG4_Ill_SVrefine2DISCOVARDovetail_9355:HG4_Ill_MetaSV_1085:HG4_Ill_GATKHCSBGrefine_9066:HG4_10X_allpass_2486:HG3_PB_pbsv_12825:HG3_PB_SVrefine2PBcRDovetail_6186:HG3_PB_SVrefine2Falcon1Dovetail_7937:HG3_Ill_manta_2978:HG3_Ill_SVrefine2DISCOVARDovetail_9484:HG3_Ill_MetaSV_1114:HG3_Ill_GATKHCSBGrefine_8676:HG3_10X_allpass_2570:HG2_PB_SVrefine2PBcRplusDovetail_2329:HG2_PB_SVrefine2PB10Xhap12_9499:HG2_PB_SVrefine2Falcon2Bionano_6491:HG2_PB_SVrefine2Falcon1plusDovetail_2458:HG2_Ill_manta_3648:HG2_Ill_SVrefine2DISCOVARplusDovetail_2708:HG2_Ill_MetaSV_1020:HG2_Ill_GATKHCSBGrefine_8799:HG2_10X_allpass_2116:HG2_10X_SVrefine210Xhap12_9184;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9184:HG2_10X_allpass_2116:HG2_Ill_GATKHCSBGrefine_8799:HG2_Ill_MetaSV_1020:HG2_Ill_SVrefine2DISCOVARplusDovetail_2708:HG2_Ill_manta_3648:HG2_PB_SVrefine2Falcon1plusDovetail_2458:HG2_PB_SVrefine2Falcon2Bionano_6491:HG2_PB_SVrefine2PB10Xhap12_9499:HG2_PB_SVrefine2PBcRplusDovetail_2329:HG3_10X_allpass_2570:HG3_Ill_GATKHCSBGrefine_8676:HG3_Ill_MetaSV_1114:HG3_Ill_SVrefine2DISCOVARDovetail_9484:HG3_Ill_manta_2978:HG3_PB_SVrefine2Falcon1Dovetail_7937:HG3_PB_SVrefine2PBcRDovetail_6186:HG3_PB_pbsv_12825:HG4_10X_allpass_2486:HG4_Ill_GATKHCSBGrefine_9066:HG4_Ill_MetaSV_1085:HG4_Ill_SVrefine2DISCOVARDovetail_9355:HG4_Ill_manta_3094:HG4_PB_SVrefine2Falcon1Dovetail_8004:HG4_PB_SVrefine2PBcRDovetail_6587;NumExactMatchSVs=25;ClusterMaxShiftDist=0.040367;ClusterMaxSizeDiff=0.040367;ClusterMaxEditDist=0.040367;PBcalls=14;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-824;DistBack=38425;DistForward=-805;DistMin=-805;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=12:42238054-42238894;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=765.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:77:./.:0:4:0:1:1/1:0:7:0:10:1/1:0:32:./.:3:32:.:.:.
chr12	43977449	HG4_PB_SVrefine2Falcon1Dovetail_8008	CAAGACATTCCATGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGACAAGCTTTTTGATGTGCTGCTGAATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGCCCAGTAGTCATTCAGGAGCAGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAAATGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGATGCAGCGCACCTGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAGAAATATGATAGAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1883:HG2_10X_allpass_2117:HG2_PB_assemblyticsfalcon_5578:HG2_PB_assemblyticsPBcR_5394:HG3_PB_pbsv_12832:HG4_PB_assemblyticsfalcon_5479:HG3_PB_assemblyticsfalcon_5580:HG3_PB_HySA_19820:HG4_Ill_Krunchall_18224:HG3_Ill_Krunchall_17543:HG2_Ill_Krunchall_17891:HG2_Ill_tnscope_1464:HG4_PB_pbsv_13161:HG4_PB_SVrefine2PBcRDovetail_6590:HG4_PB_SVrefine2Falcon1Dovetail_8008:HG4_Ill_SVrefine2DISCOVARDovetail_9363:HG4_Ill_MetaSV_1088:HG4_Ill_GATKHCSBGrefine_9067:HG4_10X_allpass_2487:HG3_PB_SVrefine2PBcRDovetail_6193:HG3_PB_SVrefine2Falcon1Dovetail_7944:HG3_Ill_SVrefine2DISCOVARDovetail_9490:HG3_Ill_MetaSV_1116:HG3_Ill_GATKHCSBGrefine_8678:HG3_10X_allpass_2572:HG2_PB_pbsv_13156:HG2_PB_SVrefine2PBcRplusDovetail_2332:HG2_PB_SVrefine2PB10Xhap12_9503:HG2_PB_SVrefine2Falcon2Bionano_6494:HG2_PB_SVrefine2Falcon1plusDovetail_2461:HG2_Ill_SVrefine2DISCOVARplusDovetail_2716:HG2_Ill_MetaSV_1022:HG2_Ill_GATKHCSBGrefine_8800:HG2_10X_SVrefine210Xhap12_9187;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9187:HG2_Ill_GATKHCSBGrefine_8800:HG2_Ill_MetaSV_1022:HG2_Ill_SVrefine2DISCOVARplusDovetail_2716:HG2_PB_SVrefine2Falcon1plusDovetail_2461:HG2_PB_SVrefine2Falcon2Bionano_6494:HG2_PB_SVrefine2PB10Xhap12_9503:HG2_PB_SVrefine2PBcRplusDovetail_2332:HG2_PB_pbsv_13156:HG3_10X_allpass_2572:HG3_Ill_GATKHCSBGrefine_8678:HG3_Ill_MetaSV_1116:HG3_Ill_SVrefine2DISCOVARDovetail_9490:HG3_PB_SVrefine2Falcon1Dovetail_7944:HG3_PB_SVrefine2PBcRDovetail_6193:HG4_10X_allpass_2487:HG4_Ill_GATKHCSBGrefine_9067:HG4_Ill_MetaSV_1088:HG4_Ill_SVrefine2DISCOVARDovetail_9363:HG4_PB_SVrefine2Falcon1Dovetail_8008:HG4_PB_SVrefine2PBcRDovetail_6590:HG4_PB_pbsv_13161;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0104962;ClusterMaxSizeDiff=0.0104962;ClusterMaxEditDist=0.0104962;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2100;DistBack=55297;DistForward=32156;DistMin=32156;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=12:43977450-43979560;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=766.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:102:1/1:0:24:0:24:1/1:0:15:0:17:1/1:0:31:1/1:3:130:2415:.:.
chr12	45903153	HG2_10X_SVrefine210Xhap12_9192	ACCCAGCATTGCCCTAGAAGGGGCTTTCTGCAGTGGCTCTAACTCCTGCAATAAGGCTCTGCCTGGGCTACCAGGCTGCTTGCAACATCCTTTGAAATCTAGAAAGAGGAAGTAATGCCCCCACAGCTCTTGCATTCTGCTTTACTTAAATCAGCAGTGTTAGCACCTCATGAGCACCACCAAGGTTTACCACTTGTACCTTTTGGAGTGGCGGGTCAAGCCACACCTGGGCCCACTTGAGCCACAGCGTGGGTAGCTGGAAAGAACAGCTTCAGAATGCAGGGAGCAAAACCTAAGGTGGCCCTGAGCAAGGGCTTGTCCTCCAAAACCATTCTGTTCTCTAGAACCCTGGGCCTGTGTTAGGAGAGACAGCCTTCAAGATCTCTGAAATGCCTTTGGGGTTTTTCTCTTATTGTCCTGATGAACAGTCTCCGGCTTTGTTCTATTCACACTAATTTCTGTATCAATCAGTTGCTTGGTCACACCCTTGGTTTCCTCTGCTAAAAAGCCCTTTCATTGTCTACCATATAGCCAGGCTGCAAAGTTTCCAGATCTTTCCACTCTGCTTCCCTTTTAATTATAAATTATATCTTTAAATCATCTCTTTCCTCTTATTTTACTATAAGCAGTTAAAAGTAGCCATGCAGCAGCCTGAATGCTTTGATGTTTAAATATTTCTTCCAATATTTGTCAAACCTGTGAGCTCTAAAGCATGAAGAATGAAATCCAGGGCAACATAAGAGGATATGGTGGTGTGTGGTTAATTTTGTGTGTCAACTTGGCTAAGCCACTAGATATTCCAGTTCATCACTCTTAAATTCCACTTTCCATAAAGTTTTCAGGCGCAGACACAGTTCAGCCAAGTTCTTTTCCACTTTATAACAAGAATGGCCTTTACTCCAATTTCCAATACCTTATTTCTCAGTCCCATCTGAGACATAAGACCTCATCAGAATGGCCTTAGTGTCCATAGTTCTATCAACATTCTGGTCACAATTACTTAAGTAATCTCTAAGAAGTTCCAGACTATCCTTAGTCTTCTCTTCTTCCAAGCCCACATCAAAATCACTCTTAACATTTCATTCAAGCTAGTACAGACTTTTTCTAGCCTACTTCTCTGTATTAGTCTCTTTTCACACTGCTATAAAGATACTACCTGAGACTGAGTAATTTATGAAGAAAAGAGGTTTAATTGACTCACAGTTCCACATGGCTGGGGAAGCCTCAGGAAACTTAAAGTCATGGCAAAAGGCAAAGGGGAAGCAAGGCATGTGTTCCATGATGGTAGGCAAGAGAGAGGGAGCACAGGAAAAACTGCCACTTTTGAAACCATCAGATCTTGTGAGAAATCCCTCAATATCATGAGAACAGCATGGGGAAAACTGCCCCATGATTCAATCACCTCCCACCAGGTCCCTCCCTGGATACGTGGGGATTACAATTCAGATTACAATTCGAGATGAGATTTGAGTGGGAATACAGCCAAATCATATCATTCTGCCCCAATCCCTCCCAAATCACATGTCCTTTTTACATTTCAAAACCAATCATGCCTTCCCAACAGTCCTCCAAAGACTTAACTCTTTCCAGATTAACTCAAAAGTTCAAGTCCAAAGTCTCATCTGAGACAAGGCAAGTCCCTTCTGCCTATGAGCCTGTAAAAATCAAAAACAAGTTAGTTACTTTCAAGATACAATAGGGGTACAGGCATTGGGTAAATGTTCCCATTCCAAATGGGAAAAACAAAGGGGCTACAAGCCCCATGCAGTCCAAAATCTAGCAGGGCAATCATTAAATCTTAAAGCTCCAAAATAATCCCCTTTGACTCTATGTCTCACATCCAGGGCATGCTGATGCAAGGGGTGGGTTCCCATAGCTTTGGGCAGCTCCACCCCTGTGGCTTTGCAGGGTACAGTTCCTTTAGCTGCTTTTATGAGCTGGCATTGAGTGCCTTCTGGTTTTCCAGGTGCACAATGCAAGCTGTTGATGGACCTACCATTCTGGGGTCTAGAGGATGGTGGCTCCCTTCTCACAGCTCCACTAGGCCATACCCCAGTAAGGACTCTGTGTTGGGGCTCCAACCCCACATTTCCCTTCAGTACTACCCTAGCAGAGGTTCTCAATGTGGGCCCCACCCTTGTAGCTGACTTCTGCCTGGACAGCCAGGCATTTCCATACATCCTCTGAAATCTAGGTGGAGGCTCCCAAAGCTCAACTCTTGTCTTCTGTGCACCCCCAGGCCCAAAACCATGTGGAAGCTGCCAAGGCTTTGGGCTTTCACCCTCTGAAGCAATGGCCCCAGCTGTACCTTGGCCCCTTTTAGCCACGGCTGGAGCTGGAGCAGCTGGGGTGCAGGGCACTTGTTGTCCCAAGACTGCAAAGAGCACTGTGGCCCTGGGCCTGGCCCACAAAACCATTTTTCCCTTTTAGGCCTCTGGGCCTGTGATGGGAGGGTCTGCAGTGAAGGTCTCTGACATGCCTTGAAGACATTTTCCTCATTGTCTTTGGTATTAACAGTCAGCTCCTCCTCGTTACTTATGCAAATTTCGGCAGGAGGCTTGAATTCCTCCCCAAAAAATGGGTTTTTCTTTTCTGCCACATGGTTAGGCTACAAATTTTCCAAACTTTTATGCTTTGCTTCCCATTTAAACATATGTCCCAGTTTCAAACCATTTCTTTGTGAGCACATATAACTACATGCTTTCAGGAAAAACCAGGTCAGCTCTTGAATGCTTTGCTGCTTAGAAATTTCTCCCACCAGATACCCTAAATTATCTCTCTCAAGTTCAAAGTTCCATAGATCTCTAGGGTAGGGGCAAAATGCCACCAGTTTCTTTGTTAAAGCATAGCAAAAGTGACCTTTGCTATTGACTTATTGGGAACTAGTTTCCAATAAGTTCCTCATCTCCATCTGAGACCACCTCTGCCTGGATTTTATTGTCCATATTACTATCAGCATTTTTATCAAAACCATTAAACAAGTCTCTAGGAAGTTCCAAACTTTCCCTCATCTTCCTGTCCCCTTCTGCACCAAACTGTTCTAACCTCTGCCCATTAGCCAGTTCCAAAGTTGCTTCCACATTTTCAGGTTGTCTTTACAGCAATACCCCACTATCCCAATACCAATTCTCTGTATTAGTACATTTTCACACTGCTATAAAGATACTATCCGAGACTGGGTAATTTATGAAGAAAAGAGGTTTAATTGACTCACAGCTCCACATCGCTGACGAGGCCTCAAGAAACTTACAATCATGGTGGAAGGTGAAGGGGAAGCAAGGCACATTTTACATGATGGTAGGCGAGAGAGAGCCAGAGAGCGAGAGAGCACAGGAAAACTAGCAACTTTAAAACCATCAGATCTCATGAGAAGCCCCTCACTATCATGAGAACAGCATGGGGGAAACTGCCCCCATGATCCAATCACCTCCCATCAGGTTCCTCAGTGGACACATAGGGATTACAATTTGGATTAAAATTTGAGATGAGATTTGGGTGGGGACACAGCCAAATCATATCATTCCCCAAATTCTTCTAGCATCTTCCGAGTTCCAAAGTTGCTTCCGCATTTCCGGGTATTGGTTATCGCAACAACTCCCTTCCTGTTACCAATTTTCTTTCTTAGTCCATTATCTGATGCTATATCAGAATACCATAGACTGAGCAAATTATAAAGAAAAAAGGTTTATTTAATTTCATGGTTCTGGAGGCTGAGAAGTCTAAAAGCATGGTGCCAGCATCTGGGGAGGGCCTTTGTGTTACATCATTACATGGTGGAAGGCATTCACATGATGAGAGGACAAGAGCAAGAAAGCCAGAGAGACCTCACTTTTATGACAAAGCCACTCCCATGGTAATGAGCTCACTCCAGTGATAGCAACATTTCTCCATTCATGAGGGAAGAAGCCTTGTTAATCCATAAACCTATTCATAACAGCAGGGGTATTATATTTCCAACACATAAAATTTGGGGAGACACATTCAAACCATAGTAATAGCTTTTAAACAATATAATTTGTCAAACCTATGAGCTCCAAAGTGTGAAAAATGAAAGCCAGGACAACATAAAAGGATCTGGTGATGTGTGGTTAATTTTACATCTTGGCTAAGACACGGTAGCCAGATATTTGGTCAACAATCTGAATGTTGCTGTGAAGGCATTTTTTATGTAAAATTAACATTCTAATCAGTAGACTTTAACTAAAGCAGATTACCCTCCAGAACGTGATGGGGAGACTCATCTAATCAGTGGCCTTAAGAAAAAGACTGACCTCCCCCAAGGAAGAGGGAATTCTGCTAGCAAAATGCTTTCAGACTCAAACTGCAACATCAACTCTTCCCTAGGTCTCCAGCCTACCATGCAGATTTTGGACTTGCCAGCCTCCACAATCACATGAGCCAATTCCCTTCCTTAAAACTAATCTCTTTTTTCTCTCTTGCGATATACATACATATATGGGTATATTTGTTCTGTTTCTATATGTGTTCTATTTGTTCTGTTTCTCTGGAGAGCCCTGGCTGATAGAGGGTATGCTATAGGAAGCAATTAACATGTCTACTTATATTTATTTTTCAATCCGCATTCTAAAAACAAATTCTTCACGAAACCTTTACATGTATATAATCTATTACTATAGTGTATATAATGTAATTTAAAATTAAGTATATGTACATACTTGCTCAATTTTTAAAAACCTAATATGAGCACACAGCCAAAAAAGTTTGAAGATCACTAGTTGAAACAATGACAATGAATAAGTAATATATTCATAAAGTCCATAATGAAAAGTATAATTATAGTATTCCAAAATCAAGGGGATGTCAGACAGAGAAGTAGAGGCCAATGGAAAGGAAGCAACCTAAGGTACCTATCTTATTTTGAGGATAGGCACAGACATCGATAAGCTTAAGACATTGGTGGGGAAAACACATTCTTTATGAAAAATTATGTGCAATTCCTTCTGAAACACATAAAATTAAATATTTCAATTTTTTTATTGATAAAAACTCTTTCAGGTATTGATATAGAAAGATACATGTAGGTGCTCACAAATGAATTCCAATGTTAAACAGCAATCACTGAAGTGGCTGCAAAATAGAGTGCATAAAACATTGGAGTAGGGGAAGAAAATGCATGAACTTCAGTTTATATCTATTTTTATTTCATACATGTTAATTTCTATCTTTGTGTGTGTGTTACAATATAAAATAGAATAAATGCCTAATTTATTAATAAATATGTATATGTTTGAGGTGGGTATTTTTTTTTTTAATGTGGTGAATACTGCCCTGGAGAATAATGCCTAAGCAGATGCTATTCTTATCTGAGTGTCTACTCGTTACACTTTCTTTCCTGTCAAACTCCTATTCATCGTTTATGTCAATGTAGCTCAGGATCCACCCTTTGTAACAGACACTTTCCATGGAGTCTGGCCAACAGGTACTGTCAATCCCCCCCCCACTCACAGGGACAGGTTCCACCACACATTTGTGTTTGCCGAAGATTCTGAGTACCTTAGTTACTGGCGATTAGTCCAGAACCAGAATGAACTTGAACAGAGTTTGATTAACTAGATTCACCCTCTGAGAAATTTGGATTCAGAGATACTAATTAAATTCTGTTCATCAATAGACACAACAAAGACCTGTAAATCTGAAAACTATGAGGTAGGTACCTATCACTGGAACTAAGGAAAAGAATTTCATCTTTGCTTAGCCTTGTTAAGGGAGGCATTGCATTACCAAGATTTATTTAGTCTGCAAAGATCTGTAGTGCTAGTAATTTTTTTCTCCCAACTTTCAATTTTGAAAAATTTTAAACTTACAAAAAGTTGAAAGAATAATACAAAGAATACCTGTATACCCTTCTATGTTTGCCACATTTGCTTGCTTAATCCTACCCCTTCTTTCTCTCTCCCCATAGACATGCACACACACACACAGACATACACACACACACACACACACACACTTACATATCTTGAGCTGAAGTATCTCAAATTAGGTCTCAGACATCATGACACAATGACACATTATCCCTAAATACTTTGGCATGAGTATCCTAAGAATGAGATATTCTCCTTCATAACCCCATAATAACATTATCACAACAAATAAATTTAACAATTCAATATTATCATCTAATATATAGTCCATCTTCAAATTTTCCTATTTGAGGCCACAATGTCTTTTATAACTGCTTTTTTTCCTGATCCAGGATCTAATCAAGTTTTTAGCATTGCATTTTGTTGTTACGTTTCTTTAGTTTGTTTCAACATGTGCTAGACTCCTTGTCTTTTTGTTTTTGTTTTTCATAACACTATCTTTTTTAAAGAGCCTAGCCAGTTGTCATGTAAAATGTCTTTTCTACATCCCAAATATGTCTGGTTGTTCCTCATGGTTAGAGTCAGAATATTACAAGAGTATTACACAGACAATGCTGTATATTCCTTATCGCATCACCTAAGGTAACTTGTGTTATTTATTTATTTATTTATTTTTGAGATGGAGACTCACTCTGTCACCCAGGCTGGAGGGCAATGGCGCAATCTTGGCTCATCACAACCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACACACCACCACGCCTGGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTTGCCACGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCTGCCTTTGCTTCCCAAAGTGCTAGGATTATAGGGGTGAGCCACCGTGCCCGGCCTAGC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1026:HG3_10X_allpass_2573:HG2_Ill_tnscope_1465:HG4_PB_SVrefine2Falcon1Dovetail_8012:HG3_PB_pbsv_12838:HG3_PB_SVrefine2PBcRDovetail_6196:HG3_PB_SVrefine2Falcon1Dovetail_7947:HG2_PB_pbsv_13163:HG2_Ill_breakscan11_1884:HG2_Ill_SVrefine2DISCOVARplusDovetail_2721:HG2_10X_allpass_2118:HG2_10X_SVrefine210Xhap12_9192:HG4_PB_assemblyticsfalcon_5495:HG3_PB_assemblyticsfalcon_5592:HG3_Ill_Krunchall_17553:HG2_Ill_Krunchall_17900:HG3_Ill_MetaSV_1118;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9192:HG2_10X_allpass_2118:HG2_Ill_SVrefine2DISCOVARplusDovetail_2721:HG2_Ill_breakscan11_1884:HG2_PB_pbsv_13163:HG3_PB_SVrefine2Falcon1Dovetail_7947:HG3_PB_SVrefine2PBcRDovetail_6196:HG3_PB_pbsv_12838:HG4_PB_SVrefine2Falcon1Dovetail_8012;NumExactMatchSVs=9;ClusterMaxShiftDist=0.000442054;ClusterMaxSizeDiff=0.000442054;ClusterMaxEditDist=0.000442054;PBcalls=7;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-6786;DistBack=26928;DistForward=-1351;DistMin=-1351;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=12:45903154-45909939;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=767.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:34:./.:11:19:34:1:1|0:0:34:81:0:0/1:50:22:0/1:421:201:6870:.:.
chr12	45948359	HG2_10X_allpass_2119	AGAAACTGGAAACATTGCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTAGTATATGTGCTGCCGAAGCGAGCACAT	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_5400:HG2_PB_HySA_23931:HG3_PB_pbsv_12839:HG2_PB_pbsv_13164:HG3_Ill_GATKHC_20902:HG3_Ill_GATKHCSBGrefine_8680:HG2_Ill_GATKHC_21037:HG2_Ill_GATKHCSBGrefine_8805:HG3_Ill_svaba_16498:HG3_Ill_scalpel_12627:HG3_Ill_Krunchall_17554:HG3_Ill_250bpfermikitraw_17062:HG3_Ill_150bpfermikitraw_16572:HG3_10X_allpass_2574:HG2_Ill_svaba_16364:HG2_Ill_scalpel_12396:HG2_Ill_Krunchall_17901:HG2_Ill_250bpfermikitraw_17564:HG2_Ill_150bpfermikitraw_16536:HG2_10X_allpass_2119:HG3_Ill_Spiral_13688:HG2_Ill_Spiral_892:HG2_Ill_SpiralSDKrefine_3503:HG2_Ill_manta_3649:HG2_PB_assemblyticsfalcon_5592;NumClusterSVs=25;ExactMatchIDs=HG2_10X_allpass_2119:HG2_Ill_150bpfermikitraw_16536:HG2_Ill_250bpfermikitraw_17564:HG2_Ill_Krunchall_17901:HG2_Ill_scalpel_12396:HG2_Ill_svaba_16364:HG3_10X_allpass_2574:HG3_Ill_150bpfermikitraw_16572:HG3_Ill_250bpfermikitraw_17062:HG3_Ill_Krunchall_17554:HG3_Ill_scalpel_12627:HG3_Ill_svaba_16498;NumExactMatchSVs=12;ClusterMaxShiftDist=0.134969;ClusterMaxSizeDiff=0.134969;ClusterMaxEditDist=0.146341;PBcalls=5;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-85;DistBack=39749;DistForward=6928;DistMin=6928;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=12:45948360-45948461;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9884;PctRecOverlap=0.9885;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=768.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:29:0|1:30:6:4:28:1|0:0:20:26:0:0/1:39:14:./.:.:.:.:.:.
chr12	46510662	HG3_Ill_150bpfermikitraw_16576	ATATATATATATACATATATATATATACACATATATATACGTATATATATGTATATATATACGTATATATATATGTG	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6198:HG2_PB_HySA_23937:HG2_PB_pbsv_13167:HG3_PB_pbsv_12842:HG3_Ill_svaba_16504:HG3_Ill_manta_2980:HG3_Ill_Krunchall_17560:HG3_Ill_GATKHC_20906:HG3_Ill_GATKHCSBGrefine_8682:HG3_Ill_250bpfermikitraw_17067:HG3_Ill_150bpfermikitraw_16576:HG2_PB_SVrefine2Falcon2Bionano_6499:HG2_Ill_svaba_16371:HG2_Ill_manta_3651:HG2_Ill_Krunchall_17906:HG2_Ill_GATKHC_21042:HG2_Ill_GATKHCSBGrefine_8807:HG2_Ill_250bpfermikitraw_17569:HG2_Ill_150bpfermikitraw_16540:HG2_10X_SVrefine210Xhap12_9195:HG2_PB_SVrefine2Falcon1plusDovetail_2466:HG3_PB_HySA_19833;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9195:HG2_Ill_150bpfermikitraw_16540:HG2_Ill_250bpfermikitraw_17569:HG2_Ill_GATKHCSBGrefine_8807:HG2_Ill_GATKHC_21042:HG2_Ill_Krunchall_17906:HG2_Ill_manta_3651:HG2_Ill_svaba_16371:HG2_PB_SVrefine2Falcon2Bionano_6499:HG3_Ill_150bpfermikitraw_16576:HG3_Ill_250bpfermikitraw_17067:HG3_Ill_GATKHCSBGrefine_8682:HG3_Ill_GATKHC_20906:HG3_Ill_Krunchall_17560:HG3_Ill_manta_2980:HG3_Ill_svaba_16504;NumExactMatchSVs=16;ClusterMaxShiftDist=0.201342;ClusterMaxSizeDiff=0.201342;ClusterMaxEditDist=0.214765;PBcalls=7;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-76;DistBack=27599;DistForward=-48;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=12:46510663-46510768;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:34:0|1:34:10:3:27:./.:1:19:26:8:0/1:29:23:./.:.:.:.:.:.
chr12	47075350	HG4_PB_SVrefine2Falcon1Dovetail_8015	TAAGAAAGTATCAGTCAGGCCGGGCGCGGTGGCTCACGTCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCATCTCTACTAAAAAAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACGCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1466:HG4_Ill_Krunchall_18242:HG3_PB_pbsv_12845:HG3_Ill_Krunchall_17562:HG2_Ill_Krunchall_17913:HG4_PB_assemblyticsfalcon_5505:HG3_PB_assemblyticsfalcon_5598:HG2_PB_assemblyticsfalcon_5601:HG2_PB_assemblyticsPBcR_5412:HG2_PB_pbsv_13170:HG4_PB_HySA_19179:HG3_PB_HySA_19836:HG2_PB_HySA_23944:HG4_Ill_MetaSV_1093:HG3_Ill_MetaSV_1119:HG4_PB_pbsv_13171:HG4_PB_SVrefine2PBcRDovetail_6596:HG4_PB_SVrefine2Falcon1Dovetail_8015:HG4_Ill_svaba_16435:HG4_Ill_scalpel_12113:HG4_Ill_SVrefine2DISCOVARDovetail_9375:HG4_Ill_GATKHCSBGrefine_9074:HG4_10X_allpass_2488:HG3_PB_SVrefine2PBcRDovetail_6200:HG3_PB_SVrefine2Falcon1Dovetail_7950:HG3_Ill_svaba_16508:HG3_Ill_scalpel_12634:HG3_Ill_SVrefine2DISCOVARDovetail_9501:HG3_Ill_GATKHCSBGrefine_8683:HG3_10X_allpass_2575:HG2_PB_SVrefine2PBcRplusDovetail_2336:HG2_PB_SVrefine2PB10Xhap12_9508:HG2_PB_SVrefine2Falcon2Bionano_6501:HG2_PB_SVrefine2Falcon1plusDovetail_2468:HG2_Ill_svaba_16376:HG2_Ill_scalpel_12403:HG2_Ill_manta_3653:HG2_Ill_breakscan11_1885:HG2_Ill_SVrefine2DISCOVARplusDovetail_2728:HG2_Ill_MetaSV_1027:HG2_Ill_GATKHCSBGrefine_8809:HG2_10X_allpass_2120:HG2_10X_SVrefine210Xhap12_9197;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9197:HG2_10X_allpass_2120:HG2_Ill_GATKHCSBGrefine_8809:HG2_Ill_MetaSV_1027:HG2_Ill_SVrefine2DISCOVARplusDovetail_2728:HG2_Ill_breakscan11_1885:HG2_Ill_manta_3653:HG2_Ill_scalpel_12403:HG2_Ill_svaba_16376:HG2_PB_SVrefine2Falcon1plusDovetail_2468:HG2_PB_SVrefine2Falcon2Bionano_6501:HG2_PB_SVrefine2PB10Xhap12_9508:HG2_PB_SVrefine2PBcRplusDovetail_2336:HG3_10X_allpass_2575:HG3_Ill_GATKHCSBGrefine_8683:HG3_Ill_SVrefine2DISCOVARDovetail_9501:HG3_Ill_scalpel_12634:HG3_Ill_svaba_16508:HG3_PB_SVrefine2Falcon1Dovetail_7950:HG3_PB_SVrefine2PBcRDovetail_6200:HG4_10X_allpass_2488:HG4_Ill_GATKHCSBGrefine_9074:HG4_Ill_SVrefine2DISCOVARDovetail_9375:HG4_Ill_scalpel_12113:HG4_Ill_svaba_16435:HG4_PB_SVrefine2Falcon1Dovetail_8015:HG4_PB_SVrefine2PBcRDovetail_6596:HG4_PB_pbsv_13171;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0906433;ClusterMaxSizeDiff=0.0906433;ClusterMaxEditDist=0.0906433;PBcalls=18;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-348;DistBack=7771;DistForward=69270;DistMin=7771;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:47075351-47075714;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:./.:0:0:0:0:./.:0:2:0:9:1/1:0:56:./.:2:13:.:.:.
chr12	48725466	HG2_PB_SVrefine2PBcRplusDovetail_2340	TGTAATTAAGTTTATTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAACCAGCATGTTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGGCCGACCCCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCAGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCTGGGCGGGGGGGCTGACCCCCTCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCCGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACGCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCCGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCAGGCGGAGAGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACGCTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGATCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCAGCTGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGCTCCTTGCCCTCGGGCCCCGCGGGGCCCGTCCGCTCCTCCAGCCGCTGCCTCCCTGGCGGCGCTCGCCGGCGCGGCGGCAAAGACTGAGACAGCTCCGCTGCCCGCTGAACTCCATCCTCCCGGCGGTCGGGCGGCGGCGGCTGCCAAGTCTTTTTCATTGTTACCAATCTAATAGGTAATATTTCCTCAGAAATTCAGGAGTGGGGCAGAAGATAAACGTGAGCGGGAGAGATGAGGAAATGTTAGAGACTGGAAGGAGCACCTGTGAGCATTATAGCACCAGGTATTGGAGATAAGATAAATCAGAGAGAGGCCCCTGTTCTCAGGAAACAGGGTGGAGAGGTATGGAAGTTGGAGGATGATAGTAATTGAGAAGAGAGGTAAAACCAAAATGCAGTGGCTCACACTTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGAGGATCGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGTAACACAAGAAGACCCCATCTCAACAAAGAAAAAAAAAATAGCTGGGTATGGTGGCGTGTGTGCTTGCAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGCTCACTTGAGCCTGGGAGGTAGAGGCTGCAATGAGCCGTGATCCTGCCACTGCATTCCAGCCTGGGTGACAGGGAGAGATCTTGGCTCAAAAAAATTAAATAAAAAAACCCCAAATGTTTCTAATTGCTAGTAATGTGCTCATTTGGTGCTAGAGCCTGAAGTAGCTAGAACTACATGTCTACTTTACAAGGCAAGGCAGAAAGCAGACATGCAGTGAGTTTTGGCTAAACCGGTTGGGTCAACTATCTTTGCAGCACC	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_18259:HG2_10X_allpass_2123:HG3_10X_allpass_2576:HG2_PB_assemblyticsfalcon_5615:HG4_10X_allpass_2491:HG3_Ill_Krunchall_17575:HG2_Ill_Krunchall_17926:HG2_Ill_tnscope_1467:HG4_PB_pbsv_13179:HG4_PB_SVrefine2PBcRDovetail_6601:HG4_PB_SVrefine2Falcon1Dovetail_8022:HG4_Ill_MetaSV_1095:HG3_PB_SVrefine2PBcRDovetail_6205:HG3_PB_SVrefine2Falcon1Dovetail_7956:HG3_Ill_MetaSV_1123:HG2_PB_pbsv_13179:HG2_PB_SVrefine2PBcRplusDovetail_2340:HG2_PB_SVrefine2PB10Xhap12_9513:HG2_PB_SVrefine2Falcon2Bionano_6506:HG2_PB_SVrefine2Falcon1plusDovetail_2474:HG2_Ill_SVrefine2DISCOVARplusDovetail_2735:HG2_Ill_MetaSV_1028:HG2_Ill_GATKHCSBGrefine_8816:HG2_10X_SVrefine210Xhap12_9207:HG2_Ill_breakscan11_1886:HG3_PB_pbsv_12856;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9207:HG2_Ill_GATKHCSBGrefine_8816:HG2_Ill_MetaSV_1028:HG2_Ill_SVrefine2DISCOVARplusDovetail_2735:HG2_PB_SVrefine2Falcon1plusDovetail_2474:HG2_PB_SVrefine2Falcon2Bionano_6506:HG2_PB_SVrefine2PB10Xhap12_9513:HG2_PB_SVrefine2PBcRplusDovetail_2340:HG2_PB_pbsv_13179:HG3_Ill_MetaSV_1123:HG3_PB_SVrefine2Falcon1Dovetail_7956:HG3_PB_SVrefine2PBcRDovetail_6205:HG4_Ill_MetaSV_1095:HG4_PB_SVrefine2Falcon1Dovetail_8022:HG4_PB_SVrefine2PBcRDovetail_6601:HG4_PB_pbsv_13179;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00997249;ClusterMaxSizeDiff=0.00997249;ClusterMaxEditDist=0.0323413;PBcalls=12;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2914;DistBack=-2915;DistForward=-2098;DistMin=-2915;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=12:48725467-48728395;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=771.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:89:./.:0:0:0:0:1/1:0:5:0:5:1/1:1:13:1/1:1:202:5070:.:.
chr12	49470019	HG2_10X_SVrefine210Xhap12_9209	CCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGATTCGCTTGAACCTAGGAGGCGGAGGTTGCAGTGAGCTGAGATCACGCCATTGGACTCCAGCCTGGGCAACATGAATGAAACTCCATCTCAAAAAAAAAAAAAGAAAAGAAAAGAAAATGAATATTTTCATATCAATATGCAAGTTTGGGGCCAGGAGCAGTGGCTCACACCTATAATCCCAGCACTTTGAGAAGCCAAAGCGAGCAGATCACTTGAGATGAGGAGTTCGAGACCAGCCTAGGCAAAACCCCATCTCTACAGAAAATACAAAAATTAGCCAGGTGCAGTGGGTCACGCCTGTAATTCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGGCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAATCCCATCCCTACTAAAAATACGAAGAAAAAAAAATAGCCGGCGTGGTGGCAGGCAC	G	20	PASS	ClusterIDs=HG3_PB_pbsv_12861:HG3_Ill_SVrefine2DISCOVARDovetail_9509:HG2_PB_SVrefine2PBcRplusDovetail_2344:HG2_PB_SVrefine2PB10Xhap12_9518:HG2_PB_SVrefine2Falcon2Bionano_6508:HG2_PB_SVrefine2Falcon1plusDovetail_2477:HG2_Ill_SVrefine2DISCOVARplusDovetail_2739:HG2_10X_SVrefine210Xhap12_9209:HG2_Ill_tnscope_1468:HG3_Ill_GATKHCSBGrefine_8695:HG3_10X_allpass_2577:HG2_PB_pbsv_13184:HG2_Ill_SpiralSDKrefine_3515:HG2_Ill_GATKHCSBGrefine_8818:HG2_10X_allpass_2124;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9209:HG2_Ill_SVrefine2DISCOVARplusDovetail_2739:HG2_PB_SVrefine2Falcon1plusDovetail_2477:HG2_PB_SVrefine2Falcon2Bionano_6508:HG2_PB_SVrefine2PB10Xhap12_9518:HG2_PB_SVrefine2PBcRplusDovetail_2344:HG3_Ill_SVrefine2DISCOVARDovetail_9509;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0167364;ClusterMaxSizeDiff=0.0167364;ClusterMaxEditDist=0.0167364;PBcalls=6;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-473;DistBack=-474;DistForward=-444;DistMin=-474;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=305;REFWIDENED=12:49469863-49470640;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9854;PctRecOverlap=0.9854;SizeDiff=-7;StartDistance=7;EndDistance=0;GTMatch=0;TruScore=98;MatchId=772.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:0|1:30:1:1:33:0|1:52:0:0:17:0/1:51:31:0/1:42:9:.:.:.
chr12	49709175	HG2_PB_SVrefine2Falcon2Bionano_6509	AGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCTGAGGCAGGCGGATCACCTGAGGTCAGGAGTTCGAGATCAGCCTGGCCAACATGGTGAAACCCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCAGGGGCCTACAATCTCAGCTACTCAAGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGTTTGGGGTGAGCCTAAATCATGCCACTGTACTCCAGCCTGGGCAACAGAGAGAGACTCCCTCTCAATAAATAAATAAATAAATAAATAAAAATAAATGCACACTGAAATATTTGAGGCAATATATTGTCAATTTGCTCTCAAATGGTTGAGAAAAAATGTTATGTATATCCTTGCACATGTTCTGTAAGTTTAAAATTGTTTCACAAAAACAGGGAAAAAAGTTACTCTTTGGAGAAGCTTCAGATGGTTTCCCACAAGTCAAGGTTGCTCCAGCACTGTTGCTGTTAATATAATATTGGAAATTTTCTATGATGGTGTAAGAAAAAGAAATCAACAGAATCAGGGCCGGGCACGGTGACTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTCAGGAGTTAGAGATCAGCCTGACTAACATAGTGAAACCCCATCTCTACTAAAAATACAAAAATAGCCGGGCATAGTAGCACATGCCTGTAATTCCAGCTACTTGGGAGGCTAAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGAGATCATGTCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACACCATCTAAAAAAAAAAAAAATCAGCCGGGTGCGGAGGTTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTTGGCAGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAATGTGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGGTTGCAGTAAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAACAAACAAACAAAACAAGAATAACAAAAAATCTAACGAGGTATAAAGATTGAAGGGGAATATGTAAAACTGTTTTGTTTACAGAGGACATAATTATCTCTGTAGAAAACCTAGAAGAATCAATAGAAAAATAAGAAAAGAGTTCATTGGATAGAAAATCAATTATAAGAAAATATTTGCAATGTTTAAAGTGGATATGGGGAGCCAGATGTG	A	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1126:HG4_PB_SVrefine2Falcon1Dovetail_8026:HG3_PB_SVrefine2Falcon1Dovetail_7960:HG4_PB_assemblyticsfalcon_5527:HG3_PB_assemblyticsfalcon_5618:HG2_10X_allpass_2125:HG3_Ill_Krunchall_17584:HG2_Ill_Krunchall_17932:HG3_PB_HySA_19853:HG2_Ill_tnscope_1469:HG3_PB_pbsv_12862:HG3_10X_allpass_2578:HG2_PB_pbsv_13185:HG2_PB_SVrefine2PBcRplusDovetail_2345:HG2_PB_SVrefine2PB10Xhap12_9520:HG2_PB_SVrefine2Falcon2Bionano_6509:HG2_PB_SVrefine2Falcon1plusDovetail_2478:HG2_Ill_SpiralSDKrefine_3516:HG2_10X_SVrefine210Xhap12_9210:HG2_Ill_MetaSV_1030;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9210:HG2_Ill_SpiralSDKrefine_3516:HG2_PB_SVrefine2Falcon1plusDovetail_2478:HG2_PB_SVrefine2Falcon2Bionano_6509:HG2_PB_SVrefine2PB10Xhap12_9520:HG2_PB_SVrefine2PBcRplusDovetail_2345:HG2_PB_pbsv_13185:HG3_10X_allpass_2578:HG3_PB_pbsv_12862;NumExactMatchSVs=9;ClusterMaxShiftDist=0.103896;ClusterMaxSizeDiff=0.103896;ClusterMaxEditDist=0.103896;PBcalls=11;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1349;DistBack=41106;DistForward=-1341;DistMin=-1341;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=193;REFWIDENED=12:49709176-49710717;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=773.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:25:0|1:20:1:2:25:0|1:37:0:0:31:0/1:54:21:0/1:103:57:1358:.:.
chr12	50973412	HG2_Ill_GATKHC_21082	AAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_12873:HG3_Ill_svaba_16540:HG4_Ill_svaba_16462:HG4_Ill_GATKHC_21079:HG4_Ill_GATKHCSBGrefine_9091:HG3_Ill_GATKHCSBGrefine_8700:HG2_Ill_manta_3657:HG2_Ill_GATKHC_21082:HG2_Ill_GATKHCSBGrefine_8823:HG2_PB_assemblyticsfalcon_5635:HG4_PB_pbsv_13192:HG2_PB_pbsv_13194;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8823:HG2_Ill_GATKHC_21082:HG2_Ill_manta_3657:HG3_Ill_GATKHCSBGrefine_8700:HG3_Ill_svaba_16540;NumExactMatchSVs=5;ClusterMaxShiftDist=0.113821;ClusterMaxSizeDiff=0.113821;ClusterMaxEditDist=0.211382;PBcalls=4;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-59;DistBack=39575;DistForward=-49;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=12:50973411-50973473;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:0|1:23:3:2:26:./.:1:8:10:0:0/1:12:11:./.:.:.:.:.:.
chr12	51796889	HG2_Ill_Krunchall_17957	ATTAGGTAATAGGTATAAACTGCTCAGAACAGTGCTCAGAACATAATAAATGC	A	20	PASS	ClusterIDs=HG2_10X_allpass_2126:HG3_PB_pbsv_12882:HG2_PB_assemblyticsfalcon_5651:HG3_Ill_scalpel_12675:HG3_Ill_Krunchall_17606:HG3_Ill_GATKHC_20968:HG3_Ill_GATKHCSBGrefine_8706:HG3_Ill_250bpfermikitraw_17121:HG3_Ill_150bpfermikitraw_16628:HG2_PB_pbsv_13201:HG2_Ill_scalpel_12443:HG2_Ill_manta_3658:HG2_Ill_breakscan11_1887:HG2_Ill_SpiralSDKrefine_3533:HG2_Ill_Krunchall_17957:HG2_Ill_GATKHC_21097:HG2_Ill_GATKHCSBGrefine_8826:HG2_Ill_250bpfermikitraw_17615:HG2_Ill_150bpfermikitraw_16586;NumClusterSVs=19;ExactMatchIDs=HG2_10X_allpass_2126:HG3_Ill_scalpel_12675:HG3_Ill_Krunchall_17606:HG3_Ill_GATKHC_20968:HG3_Ill_GATKHCSBGrefine_8706:HG3_Ill_250bpfermikitraw_17121:HG3_Ill_150bpfermikitraw_16628:HG2_PB_pbsv_13201:HG2_Ill_scalpel_12443:HG2_Ill_manta_3658:HG2_Ill_breakscan11_1887:HG2_Ill_SpiralSDKrefine_3533:HG2_Ill_Krunchall_17957:HG2_Ill_GATKHC_21097:HG2_Ill_GATKHCSBGrefine_8826:HG2_Ill_250bpfermikitraw_17615:HG2_Ill_150bpfermikitraw_16586;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0380952;PBcalls=3;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=2317;DistForward=20898;DistMin=2317;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=12:51796888-51796943;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=775.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:39:0|1:26:6:4:23:1|0:0:26:28:0:0/1:37:31:./.:.:.:.:.:.
chr12	53086336	HG2_PB_SVrefine2PBcRplusDovetail_2358	CTCCAGGTCCTGCAGCTTCTGCCACGCATCCTGGAGGGCCTGCTCGCCTCTCTCCTCAGCATCCGAAATGAGTGACTGCATCTGTTCAATCTGCTCCAGAGACAGTTGGAGACCATTTAATGGTTAAGTTTCCAGAGCTCGATCTGGCAGGGCATTGTAGGAGGTGCAGGGCTTGGTCAGCCCTCCCTAAGCACCCGTCCCACCTGCTTCTTCACGTTGCTGATCTCTGCCTGCAGCCTCTGGACGGTGCGGTTGAGCTCTGCAATCTCCATCTTGCTGTTCTTCAGGTCGTCTCCATGTCTCCCTGCCGTGATCTGGAGCTCCTGGTACTGGGGCCAAAGGCAGCATCATAGTCAGCATGTGCTGCCCACCACAAGCCCCTCCAGGAGGGAGTAGGTCTGGGCTGCTCTCCCCTGGGAGATTCCCACCCACCTTGCACTGTGGTCACCCCTACATGCATACTCACAGCTATACCAAACCTCCCTCACCCAGGCTGCAAACACATGTATACATGCACACACTCACACTATCCCAAGCCTCCCGCATTCCCACCAGTCTCTGGGCAGACTCTCATCCCAGCCAGACAAACCTGCTTTGTGATGCCCTTTCTACCACCTTTTCACACATCTAAGCCTTCACGTTGGTCCTTACCCACACTGAGACCCCCTCACTCTTTCCACCCACCATATAGCTTCCCACCCTTTTCCAGGATGATCTCCCTAGCAGTCAAGCAGGACCTCATGTCCTCAGAGGCCCTCCATTGGCTCCACGTTCAGTCTCATTTCCCCTCCATCTCTGTTTCTGTCTCTGTATTGCCCCATTAGTCAGAACTCCACCCCCAGGACAGGGCTCTGAAGTGGGTAGGAGAAGCATCGACTCAAGGGAATCTGCACTCTGCTATTTTTCACTGTTGGCCATCTGCTTCCTAGTCTAATGTCGAAATCCATTCCACCCCAGAACACTGTGCAGGACCGTGGGACAGAGGTCAGCCAGGATTGGAGTTGGCCACAGATCATCCTCAAAGCCAGTCATCAATGCTAGTTGTTCAGAATTTAGTGACTGGACTGTCAGCCACGCCCTTTCAACCAGAGGCTTCACCATCCAAAAAGATCCAGGTCAGTTTATGGAAAAGAAGTAACCAAAGATGTGCCCAACAACTTAGCCACAAAGGAGTTGATCTAATAAGGGAGGGTGTAGTCTAACAATATAATACCAGGCTGTTAAAAATGCGGCAGGTTATTTAGTGTCACAGAAAAGTATCCATATGTGTTAAGTAAAAGAGAAAGTATAGCCTGGCCAACATGGCAAAACCCTGCCACTACTAAAAATACAAAAATTAGCTTGGTGTAGTGGCGCGTGCCTGTAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9227:HG2_10X_allpass_2127:HG3_PB_pbsv_12890:HG2_PB_assemblyticsPBcR_5462:HG3_Ill_Krunchall_17614:HG2_Ill_tnscope_1471:HG3_Ill_MetaSV_1134:HG3_10X_allpass_2579:HG2_PB_pbsv_13207:HG2_PB_SVrefine2PBcRplusDovetail_2358:HG2_PB_SVrefine2PB10Xhap12_9537:HG2_PB_SVrefine2Falcon2Bionano_6522:HG2_Ill_SpiralSDKrefine_3538:HG2_Ill_SVrefine2DISCOVARplusDovetail_2756:HG2_Ill_MetaSV_1034;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9227:HG3_Ill_MetaSV_1134:HG3_10X_allpass_2579:HG2_PB_pbsv_13207:HG2_PB_SVrefine2PBcRplusDovetail_2358:HG2_PB_SVrefine2PB10Xhap12_9537:HG2_PB_SVrefine2Falcon2Bionano_6522:HG2_Ill_SpiralSDKrefine_3538:HG2_Ill_SVrefine2DISCOVARplusDovetail_2756:HG2_Ill_MetaSV_1034;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00734214;ClusterMaxSizeDiff=0.00734214;ClusterMaxEditDist=0.00734214;PBcalls=6;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1365;DistBack=17092;DistForward=50235;DistMin=17092;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:53086337-53087704;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:./.:14:8:10:20:1|0:0:35:64:0:0/1:54:15:0/1:132:55:1270:.:.
chr12	53423815	HG2_10X_SVrefine210Xhap12_9230	TGGCAACATAGTGAGACCCCATCTCTGCAAAAAATACAAAAGTTAGCTGAGCGTGGTAGCATGTGCCTGTAGTCCCCGTGTCTTAGGAGACTGAGGTAGGAGGGTCGCTTGAGCCTGGGAGGTCAAGGCTGCAGTTAGCCAAGGTCTCATTTCAGCTTG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9230:HG3_PB_SVrefine2PBcRDovetail_6224:HG4_Ill_SVrefine2DISCOVARDovetail_9403:HG3_Ill_SVrefine2DISCOVARDovetail_9532:HG2_Ill_SVrefine2DISCOVARplusDovetail_2757:HG4_PB_SVrefine2PBcRDovetail_6617:HG3_PB_pbsv_12892:HG4_Ill_GATKHCSBGrefine_9101:HG3_Ill_GATKHCSBGrefine_8715:HG2_Ill_GATKHCSBGrefine_8832:HG2_PB_PB10Xdip_7519:HG4_10X_allpass_2495:HG3_10X_allpass_2580:HG2_10X_allpass_2128:HG2_PB_pbsv_13209:HG4_PB_pbsv_13207:HG4_PB_SVrefine2Falcon1Dovetail_8040:HG3_PB_SVrefine2Falcon1Dovetail_7974:HG2_PB_SVrefine2PBcRplusDovetail_2359:HG2_PB_SVrefine2PB10Xhap12_9539:HG2_PB_SVrefine2Falcon2Bionano_6524:HG2_PB_SVrefine2Falcon1plusDovetail_2490;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9230:HG4_PB_SVrefine2PBcRDovetail_6617:HG4_PB_SVrefine2Falcon1Dovetail_8040:HG3_PB_SVrefine2Falcon1Dovetail_7974:HG2_PB_SVrefine2PBcRplusDovetail_2359:HG2_PB_SVrefine2PB10Xhap12_9539:HG2_PB_SVrefine2Falcon2Bionano_6524:HG2_PB_SVrefine2Falcon1plusDovetail_2490;NumExactMatchSVs=8;ClusterMaxShiftDist=0.303483;ClusterMaxSizeDiff=0.303483;ClusterMaxEditDist=0.303483;PBcalls=12;Illcalls=6;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-158;DistBack=2893;DistForward=-121;DistMin=-121;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=181;REFWIDENED=12:53423816-53424154;PctSeqSimilarity=0.988;PctSizeSimilarity=0.9875;PctRecOverlap=0.7888;SizeDiff=-2;StartDistance=-32;EndDistance=-34;GTMatch=0;TruScore=92;MatchId=777.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:1:23:1:14:1/1:0:5:1:5:1/1:0:24:./.:.:.:.:.:.
chr12	54245407	HG4_Ill_manta_3101	TAAAAAGTTAGCTTCAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGACTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_13739:HG4_Ill_Krunchall_18299:HG3_PB_pbsv_12899:HG3_Ill_Krunchall_17627:HG2_PB_pbsv_13217:HG2_Ill_Krunchall_17973:HG4_PB_assemblyticsfalcon_5582:HG3_PB_assemblyticsfalcon_5675:HG2_PB_assemblyticsfalcon_5675:HG2_PB_assemblyticsPBcR_5479:HG4_Ill_MetaSV_1107:HG3_Ill_MetaSV_1139:HG2_Ill_tnscope_1472:HG2_Ill_MetaSV_1038:HG4_PB_SVrefine2PBcRDovetail_6621:HG4_PB_SVrefine2Falcon1Dovetail_8047:HG4_PB_HySA_19253:HG4_Ill_scalpel_12148:HG4_Ill_manta_3101:HG4_Ill_SVrefine2DISCOVARDovetail_9410:HG4_Ill_GATKHCSBGrefine_9108:HG4_10X_allpass_2496:HG3_PB_SVrefine2PBcRDovetail_6230:HG3_PB_SVrefine2Falcon1Dovetail_7981:HG3_PB_HySA_19909:HG3_Ill_scalpel_12685:HG3_Ill_manta_2987:HG3_Ill_SVrefine2DISCOVARDovetail_9538:HG3_Ill_GATKHCSBGrefine_8723:HG2_PB_SVrefine2PBcRplusDovetail_2363:HG2_PB_SVrefine2PB10Xhap12_9541:HG2_PB_SVrefine2Falcon2Bionano_6528:HG2_PB_SVrefine2Falcon1plusDovetail_2495:HG2_Ill_scalpel_12450:HG2_Ill_manta_3660:HG2_Ill_SVrefine2DISCOVARplusDovetail_2763:HG2_Ill_GATKHCSBGrefine_8839:HG2_10X_allpass_2129:HG2_10X_SVrefine210Xhap12_9238:HG4_PB_pbsv_13216;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9238:HG2_10X_allpass_2129:HG2_Ill_GATKHCSBGrefine_8839:HG2_Ill_SVrefine2DISCOVARplusDovetail_2763:HG2_Ill_manta_3660:HG2_Ill_scalpel_12450:HG2_PB_SVrefine2Falcon1plusDovetail_2495:HG2_PB_SVrefine2Falcon2Bionano_6528:HG2_PB_SVrefine2PB10Xhap12_9541:HG2_PB_SVrefine2PBcRplusDovetail_2363:HG3_Ill_GATKHCSBGrefine_8723:HG3_Ill_SVrefine2DISCOVARDovetail_9538:HG3_Ill_manta_2987:HG3_Ill_scalpel_12685:HG3_PB_HySA_19909:HG3_PB_SVrefine2Falcon1Dovetail_7981:HG3_PB_SVrefine2PBcRDovetail_6230:HG4_10X_allpass_2496:HG4_Ill_GATKHCSBGrefine_9108:HG4_Ill_SVrefine2DISCOVARDovetail_9410:HG4_Ill_manta_3101:HG4_Ill_scalpel_12148:HG4_PB_HySA_19253:HG4_PB_SVrefine2Falcon1Dovetail_8047:HG4_PB_SVrefine2PBcRDovetail_6621;NumExactMatchSVs=25;ClusterMaxShiftDist=0.102293;ClusterMaxSizeDiff=0.102293;ClusterMaxEditDist=0.102293;PBcalls=17;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-289;DistBack=-289;DistForward=-275;DistMin=-289;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=12:54245408-54245711;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=779.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:1:18:0:23:1/1:0:16:0:14:1/1:0:45:./.:.:.:.:.:.
chr12	57111880	HG2_Ill_scalpel_12462	GGGGGTGGGGTAGCTAGACCTCCTTTTGGGGAGGGAGGAGTTGCAGCTGGGGTTGTGGGTGCCCCTTTGT	G	20	PASS	ClusterIDs=HG2_Ill_GATKHC_21135:HG2_PB_pbsv_13227:HG4_PB_assemblyticsfalcon_5606:HG4_Ill_GATKHC_21133:HG4_Ill_GATKHCSBGrefine_9115:HG3_PB_assemblyticsfalcon_5690:HG3_Ill_GATKHC_21024:HG2_Ill_scalpel_12462:HG3_PB_HySA_19929:HG4_PB_pbsv_13227:HG2_PB_pbsv_13226:HG2_PB_HySA_24048:HG2_Ill_breakscan11_1889:HG2_PB_assemblyticsPBcR_5500:HG3_PB_pbsv_12910:HG2_PB_assemblyticsfalcon_5694:HG3_Ill_GATKHC_21023;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_scalpel_12462:HG3_Ill_GATKHC_21024:HG3_PB_assemblyticsfalcon_5690:HG4_Ill_GATKHCSBGrefine_9115:HG4_Ill_GATKHC_21133:HG4_PB_assemblyticsfalcon_5606;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0289855;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.202899;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-69;DistBack=386;DistForward=34;DistMin=34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1189;REFWIDENED=12:57111280-57112537;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=780.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:38:1/1:2:19:4:19:./.:7:1:1:6:./.:6:1:./.:.:.:.:.:.
chr12	58721236	HG2_10X_SVrefine210Xhap12_9256	TACCAATGTAGGGGTGGGTTGCCCCTACACACCTGTGGGTGTTTCTCGTAAGGTGGGACGAGAGATTTGGAAAAGAAAAAGACACAGAGACAAAGTATAGAGAAAGAAATAAGGGGACCCGGGGAACCAGCGTTCAGCATATGGAGGATCCCGCCAGCCTCTGAGTTCCCTTAGTATTTATTGATCATCTGTGGGTGTTTCTCGAAGAGGGGGATGTGTCAGGGTCACAAGACAATTGTGGGGAGAGGGTCAGCAGACAAACATGTGAACAAAGGTCTTTGCATCATAGACAATGTAAAGGATTAAGTGCTGTGCTTTTAGATATGCATACACATAAACATCTCAATGCTTTACAAAGCAGTATTGCTGCCCGCAGGTCCCACCTCCAGCCCTAAGGCGGTTTTTCCCTATCTCAGTAGATGGAGCATACAATCGGGTTTTATACCGAGACATTCCATTGCCCAGGGACAGGCAGGAGACAGATGCCTTCCTCTTGTCTCAACTGCAAGAGGCATTCCTTCCTCTTTTACTAATCCTCCTCAGCACAGACCCTTTACGGGTGTCGGGCTGGGGGACGGTCAGGTCTTTCCCTTCCCACGAGGCCATATTTCAGACTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCGGCCTTCCGCAGTTTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACTCTGAGTTGACACAGCACATGTTTCAGAGAGCACGGGGTTGGGGGTAAGGTTATAGATTAACAGAATCTCAAGGCAGAAGAATTTTTCTTAGTACATAACAAAATGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTGCTTTTCCCCACATTTCCCCCTTTTCTTTTCGACAAAACCACCATCGTCATCATGGCCCGTTCTCGATGGTCGCTGTCTCTTCGGAGCTGTTGGGTACACCTGCAGACTAACAACAGACAAAACAGGCACACAAGGATTAATATGAGATTTATAATCGTAGTACTTCCAATGGTCTTAACCCAAGTGACAGGGTTAAGATTTGCGAGGCCATCAGCAACTCCTGCAATTGCCTCAGTTCCTGGCACCAAATTTAAATGGGCTTTTGATGCTTCGAAAATTTGTTCTTTTAATTTGGAAATGTCTAAAGTGAGATTATCTTCTCTTCCCTGTAGATGGCGTCTAACCATGTCCCAGTGATGCTCAGACTCATTATAAATTTGGGGTGTAATACAAAAATCTGACGTATTCCAGTCACACTGTAACTGGAAACGATGTTCTAAGCTCATGAGCCTGTCTCCCATCCAAATGACAGTTTGTCTAAGATCATTAATTTGATTTGCCAATTTTTGATCAATACTAGATTGTGAATTCCACAATCTTGTAGAATTTTTTTGCCAATCATTAACAAAGTTTACTGACTGAACAAAAGAGTGCAATGCAACTCCTGCTACAGCAGCCATAGCTGTGACTGCAATTAATCCCATAATCACTGCAATTAAAGTAAAAATGAATCTTTTGGATCTATTTAAAACACCTTTTAATACTTCAGTCAAAATATGGATGGATGGCGAGGCCTCCCACGGTCGGTCCATGGACACAGGGATCCACACGCCCTCTCTTGCTCTCACCAGCAGAATACGGTGTTGCCAATTAAAAGTTGAATCAATGCAAGTAAGCAATCTACAATTTTCACAGGTTATAGTTTGAGAGTCTGGTTTAATAACTATATTTCCTACAACTAGCATATAAGGGGGCTTTACGCAACTTTGTAAAGGAACTGTTAGACTGGAATTTAGGTCAACAGTATAAAATGGCTTACGATCTCTTGTTTCTAAAGTTTGATTTCCAGACCAAATTCTAATGTGGTGTGAGGCCACAGTAAGCCTCCATAATTCTGGATGTTCAGGACCAGAAACAGGACTTATTATTTTTGGTCTTGGGGTAGAGATTCCTTTTTCTCCCCATTCCCAAGGGTAGAAAGACTGCAATTTTTTATGCTTATGTTTGTCTAAACTTTCTGTTAAGTCACTATCAACAGCTGGACTCACTTGTGCACTTGGACACGACTGAGTTTGTCCTGAGCAATTGTGGTAGAATTGACCTCGAGGTGCCCAATCTATAATAGTTCCAAATTCATTGTTTTGTAATATCACCACACTATTGGCCACACATTCTTCCCAAACTAAAACTTCTGTATTTTTTGATTCTTTGGGAATTTCCTTGGGGCAAGGTTTCCCTTTAGGTCTAAATTTTAATGATCTTTGATAAGAAAAGTCTTGTAAATAATTTACCCGTGGCCTGAGTGACATCCCGCTTACCATGTTATAAGTGAATCTACTGATGGGACTGACAGTAGGTACTTCTACCAACCAATTTTGGACTGCAGGCATTAAACATCCTGGTGCTCTCCCTAGGCAAATAGGAGGATAATGATACCCAATGGAGATATTTATCATCATCCCTTCTTCCTCAGGTTTGGCAGGGCAGCGATCATCTATGGGGCCATGTACCCATACACTATCATTAACATATACTTCTATAGGATTATCCATCCATGTGACTGCCCGAATTAAGGGCGGGAAAGGCACATAGGCCCAGTTGGTATAGTTAGCTGCAGCTGCTCCTGCAGGCATAGGGAGACTTACCACCATTGATACAATCATCAAGGCTGCAAGCAGCATACTCTCTGGGGTTTGTGTCACCTTTGTGTTCTCTAGATATTTTGTAGCTAACTGCGTCAGCTTCTTTAGTTGTGCCCAAGTCGGCGGCTCTGCCTTCTTGGTGGATGGCAACTTCATCTGTTCTGATGTCACCATTTTGTTCATCTTGTGAGTCAACGGTGCTCGATTGCGGTGTCTCCGTCTCCGCGGAGGTGCTTTTCTTTGCATCTCCGATGGGTGCATTGTAGAACTTCAAATGTCTAGTGGGTATCCAAACAGGAAGCTGATTTTCTCCTGGTGAAACACAAGCAAAACCTCTCCCCCACGTTATCACCTTCCCTATTTCCCATGTCTTATTTTTATTATCTTTCCACCAAATTAGTTTTCCTTCATGTGGGCTGTTCTTTTTACCAGTAAGATGTTGTTCTGCAGAAGTAGTAGTCTGATTTCCATAAATGTTTAAAAAATTTAAAGTATAGAGTGCTAGATTAAGTTGCATCTGAGGAGTGGTACACTCCTTACTGTCTCCCCCTTCTTTTTGTTTAACTAATTGGGTTTTGAGTGTTCTATTAGTTCTTTCAACTATGGCCTGTCCTTGGGAATTATAAGGAATTCCTGTTGTATGTGAAATTTTCCACTGACTTAAGAATTTTTGGAAAGCTTTACTACAATATCCTGGTCCATTGTCAGTTTTGATTTTTTCTGGAACTCCCATTACAGCAAAACAAGACAATAAATGTTTTTTAACATGGGAAGTACTTTCTCCTGTTTGGCAAGTTGCCCATATGAAATGTAAATAAGTATCAACTGTTACGTGAACATATGATAATCTTCCAAATGAAGGTACATGCGTGACATCCATTTGCCATAACGCATTAGGACACAGACCTCTGGGATTAACTCCTGCCTCTTGAGTGGGCAGGTGTAAGACTTGACACTGGGTGCAATGTTGTACAATATCTTTTGCCTGTTTCCATGTGACATCAAATTTGTTTTTTAATCCTGCTGCATTTACATGAGTCAAAGCATGAAGTTCTTGTGCTTTTATGAGTGCAGATGATGCCAGTAAGTCAACTTGTTCATTTGCTTTAGTCAAAGGCCCTGGTAAATTAGTGTGTGCTCGAATATGAGTAATATAAAATGGGAAATTTCTTTTTCTTACAGTTTGTTGTAATAAATTGAATAGCTGGTTTAACTGATCATCCATGCTATATTTAATTAGAGCTGTCTCAACATCCCTTGTAGCTTGTACTACATATGCAGAATCTGATATAATACTGATAGGTTGGTCAAAATCTTGTAACACTGTAATGACTGCAACCAACTCTGCTCTTTGAGCCGATTGATATGGAGTTTTGATTACTCGTTCTTTCGGCCCTGTGTAAGCTGCTTTTCCATTGCTGGAACCATCAGTAAATACTGTTAGAGCATTTTCTAAAGGTTCACGTCTGGTAATTTTAGGTAGAATCCAAGTAGTCAATTTTAAGAACTGGAAGATCTTTGTTTTTGGGTAATGATTATCAATAATTCCCACAAAATTAGCAAGACCAATCTGCCATGCACCAGAATTGATAAAGGCTTGTCTAACTTGTTCCTTGGTTAAAGGGACAACTATTTTGTCTGGGTCATTTCCACATAATTTTATTATTCGTAATCTTGTCTGACCAATTAATGTAGCTATTTGATCCAAGTACAATGTAAAAGTCTTAACTGTACTGTGAGGAAGGAATGACCACTCCACAAGATCAGTATTTTGAATAATGATGCCTGTTGGAGAATGTGCAGTGGCAAAAATCAAAAGTTGGATGGGGCTAAGGGATCTATTCTATTTATTTGCGCTGACTGAATTTTTTCTTCCACTAATTTAATTTCTTTTGTTGCCTCTGGGGTTAACTATTTAAGTCTGAGTCTCCTCTTAAGATAGAGAACAAATTTGACATGGCATAAGTAGGAATGCCTAGAGTTGGCCGAATCCAATTAATATCTCCTAGTAATTTTTGAAAATCATTTAGTGTTTTTAATGTGTCTTTTCTTATTTCTATTTTTTGTGGCTAATTTTTCTATTTTCTATCTGTATCCCTAAATAATGAAAAGGAGTAGAGGTTTGGATCTTATCAGATGCTATTGCCAGTCCTGCATTGGCAACCTCTGCTTGCAGAAATGTATAACAGTCAATTAATTTATCTTTCGTTTCTGCAGCACATAAAATATCATCAATATAATGAATAATATAACAGTCTGAAAACTTTTCTCTAACTGGTTGAAGAGCTCGACCTACAAAAGTCTGACAAATAGTTGGACTATTAAGCATTCCCTGAGGTAACACTTTCCACTGAAACCTGGTGGCTGGTTCTTTATTATTTATGGCTGGTATAGTAAAGGCAAATTTTTCACAATCCTGCTCTGCCAGAGGGATGGTAAAAAAGCAATCCTTTAGATCAATTATAATTAAAGGCCAATCTTTTGGGATCATGGCCGGAGAGGGCAACCCAGGTTGGAGAGGCCCCATGGGTTGAATTATGGCGTTTACAGCCCTTAAGTCAGTTAACATACGCCATTTGCCTGATTTCTTCTGAATTACAAACACAGGAAAATTCCAAGGTGAGAACGAAGGCTCAATATGACCCTTTTCTAACTGTTCATTTGCTAATAAATGTAAAGCCTCCAGTTTTTGTTTTGGTAGCGGCCACTGATTTACCCACACCAGTTTTTCTGTTTTCCAAGTTAATGGTATGGGTTTAGGAGGCTCTAGAGTGGCCGCCCCTAAAAAGGATACCCTATTCCTTCTCTTTTTTGATTTATTTTAGCCTCAACTGGAACTTTAATGCCATCTTCATTTTTCCCTAGTCCCTTTCCTGGTATATATCCCATCTTGGTCATGATTTTTTGACTCGTGGGGCTATATAATGGAGTGGGCATGGTGATTTCCGCACCCCATTGTTGTAATAAATCTCGACCCCACAGATTAAGAGGAATTGAAGTAATCATTGGCTGAACAGTACTTTCTTGATTATCTGGCCCTAAGCAATGTAAAATCTCAGTACTTTGATACACTTCTGAGGCTGTGCCTATGCCGACAAGTCCTGTAACAGCCTTTTGTTTAGGCCAATTTTTTGGCCACTGATTTAAAGCAATGATAGAGACATCTGCTCCAGTGTCTACCAACCCTTCAAACTGTTTTCCTTGAATAATGGCCTTACACACAGGTCTGTTCTCTGAGACCTGACTTGCCCAATATGCAGCCTTTCCTGTTGGATCAGTGCTTCCAAGCCCTCCTATTATTTTTATTTCACTATTTCCACCCTTAATATATGGCAGGAGTAATAATTGAGCAATCCTGTCTCCTGGACTGGCACTCCAAGGAATTGAAGAGCTAATAACCAATTGAATTTCGCCTTTATAGTCTGAATCAACCACACTAGTATGAATTTGAACTCCTTTTAGATTTAGACTTGATCTTCCCAAGATTAGTCCTACAGTCCCCTCAGGCAGGGGGCCATATACCCCTGTGGGGATTTTTTGTGGGGGCTCCCCTGGAAGCAGAGAGACTGCTTGTATAGTACATAAATCTACTGCTGCACTGCCGCTTGTGGTGGGGGACAATTGTTGTATTGTGGTAACTGGCTTATTCCCTGAAACACTTGGGACAGTGGGGGTTGTTGTCCCTGAAAACCCTGAGGAACAAATGGCTGAATTGGGAATGCCCCAGTTTGTTGTGGGGCCTGAGGCTGGCCCCTTTGCTCGTTTCCCGACAATGGTTGCCCATTTTTATCAAATTTAGAACGACATTGACTAGCCCAATGTTTTCCTTTTTTACATCTTGGACATAAGTCAGGTGGCTCTCTACCTGTTGTAGTTGCTTGAATAGTTATATTCTGTTTGTTTAAGACTGGGCAATTCTTTTTTAAGTGACCAATTTGACCACAATTGTAACATTTTCCTCCAAATGTTCTAACTTGTCCTCCTAAAACAACTCCTGTTATTGCTTGAGCCATAAGCATAGCTTTATGCATAGCTCCTCCGATTCCATCACAGGCTTTTACATATTCTGAGATTACATCTGATCCTGCAGGAACCTTTCCTTTTAATGGCTTAATGGCTGATTGACACTCAGGATTGGCGTTTTCATATGCCATCAACTCCACTATGACCTTACGGGCTTTTTCATCGGCAATTGACTTTTGAGCAACATCTTGGAGCCTTGCCACAAAATCAGGATAGGGCTCTTTTGAACTTTGTCTTACTGTATTAAATGAGGGGCAGGTACTTCCTGGGTCTTGGATTTTTTCCCAGGCTCTAAGGCAGATAGCTCTAACTTGCTCAATGGCCTCATTTTGCATTAATGCTTGTTGACTAATAGTACTCCAATTTTGACCTATTCCTAATAGTTGATCTGCATCTATGTTAACTGGAGGATTGGCAGCCCTATTTCTTTGGACCTGTTCTTGTACCCCATCAATCCACCAAGTCTTAAATTGTAAAAATTGAGAGGGTAAGAGAGACGATTTTGCCAGAATCTCCCAATCATAAGGAATGAGTCTATGTCCATGAGCAATGGAATCTAATAATGTCCTCATATAAGGGGAGTTGGGTCCATACTGTTTTACTCCTTCTTTCATATCTTTTAGCATTTTTATTGAAAAAGACTTGTATCTGGCCTCAACTGTGGGAGGCTCTCCCTCTTGGGCTCCTTCTCCAGGTGGCATCGGTTCTAACATTACTGGGAATTGCCATGCCTCAGTATCTCCTTCCTTTCTTGATTTATCAATAATTTCATGTAATTCACTACCCTGTCTACTAGGTGGTGCCGTAGGATTAAGTCTCCTAGTGGGCGGCTGAGGGTATGGCGCCCTGCCCTGTGGTGCTGGGGGCATTCCTGGATATCCATACTGACTTTCTGGGGGTGGCCGATACTGAAGTTCAGCCGGCGGCCAGTATTGATAAGCTACTGGTGGTTGGGTCTTATTTTCTTTAACCTGCGTTTGAGGTTGTAATGTTACGGGCACCTGACCTGCTGGAAGAGGACTTGTGCCTCGTGGTTTAGACTCTGATGGCCCCACTAATTCTGGACCTTTTCCTTCTAATTTTAACGTTTCAGGATATATCACCTCCTGTAATTGATTATAGTCAACATTTTGCGTTGACTGAGCCATTACCGGCTCTGCTGCATATTCGCAATGTAAACCTTCCGTTTCTTTCTGGGATTTTTTCCTTGTGTTTTCATTACAATCTATTATACAGCTTCCAGGGGCATCAGAAACTGAAATGCTATCTTCTTCTGTTTGAAATGGTTCTAAAGCTGCTTTAATAATGGCCCAATCATTCCATACTGTAAGTGGAATGATATTACCCTTCCTACCTGCTTGTTTTAGTTCCTTACCAATTCTTTTCCAATCTTTTAGATCTAAAGTTCCTTGTTCTGGAAACCATGGGCAAAATTGTTCTATTATTTGAAATAGCTTGATTAGATTTTTTGTAGATACTTTAACTCCCCCTCTTTTTAAAAGAATTTTAATAAAGCTGAGATAAGAGGCATATTTACTTTTAATTTTACTTTTAGTTTGCCCCATTATCACCCTAGCTTCTTCCGAGAGCACAAGCTTACCGTAAGGCTGACTGTAGACGTCCTCGGGATCTCTCGTCGACTTGTCCTCAATGACCACGCTCGAGCGTACCTTCACCCTAGAGAAAAGCCTCCACGTTGGGC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_12917:HG2_PB_pbsv_13234:HG3_PB_pbsv_12918:HG3_Ill_MetaSV_1148:HG2_Ill_MetaSV_1043:HG2_PB_pbsv_13233:HG3_PB_SVrefine2PBcRDovetail_6240:HG2_PB_SVrefine2PBcRplusDovetail_2374:HG2_PB_SVrefine2PB10Xhap12_9553:HG2_PB_SVrefine2Falcon2Bionano_6540:HG2_10X_SVrefine210Xhap12_9256;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9256:HG2_PB_SVrefine2Falcon2Bionano_6540:HG2_PB_SVrefine2PB10Xhap12_9553:HG2_PB_SVrefine2PBcRplusDovetail_2374:HG3_PB_SVrefine2PBcRDovetail_6240;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0001178;ClusterMaxSizeDiff=0.000117793;ClusterMaxEditDist=0.000824548;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-8488;DistBack=75656;DistForward=-7521;DistMin=-7521;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=975;REFWIDENED=12:58721237-58730699;PctSeqSimilarity=0.9963;PctSizeSimilarity=0.9999;PctRecOverlap=0.9208;SizeDiff=-1;StartDistance=-671;EndDistance=-672;GTMatch=0;TruScore=97;MatchId=781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:37:77:0|1:29:1:1:40:0/0:29:0:32:0:0/0:57:0:0/1:460:182:8464:.:.
chr12	59834242	HG2_Ill_scalpel_12476	AGACCCTTATCAGTAGTTCTGCTTTTGCCCTTTGCCTTGTGATCTTTGTTG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_16630:HG2_PB_assemblyticsPBcR_5518:HG4_PB_assemblyticsfalcon_5626:HG2_PB_pbsv_13238:HG4_PB_HySA_19287:HG2_PB_HySA_24063:HG4_PB_pbsv_13236:HG4_Ill_svaba_16513:HG4_Ill_scalpel_12172:HG4_Ill_Krunchall_18326:HG4_Ill_GATKHC_21150:HG4_Ill_GATKHCSBGrefine_9125:HG4_Ill_250bpfermikitraw_17491:HG4_Ill_150bpfermikitraw_16825:HG2_PB_assemblyticsfalcon_5717:HG2_Ill_svaba_16456:HG2_Ill_scalpel_12476:HG2_Ill_SpiralSDKrefine_3564:HG2_Ill_Krunchall_18006:HG2_Ill_GATKHC_21154:HG2_Ill_GATKHCSBGrefine_8851:HG2_Ill_250bpfermikitraw_17664;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16630:HG4_PB_pbsv_13236:HG4_Ill_svaba_16513:HG4_Ill_scalpel_12172:HG4_Ill_Krunchall_18326:HG4_Ill_GATKHC_21150:HG4_Ill_GATKHCSBGrefine_9125:HG4_Ill_250bpfermikitraw_17491:HG4_Ill_150bpfermikitraw_16825:HG2_PB_assemblyticsfalcon_5717:HG2_Ill_svaba_16456:HG2_Ill_scalpel_12476:HG2_Ill_SpiralSDKrefine_3564:HG2_Ill_Krunchall_18006:HG2_Ill_GATKHC_21154:HG2_Ill_GATKHCSBGrefine_8851:HG2_Ill_250bpfermikitraw_17664;NumExactMatchSVs=17;ClusterMaxShiftDist=0.122449;ClusterMaxSizeDiff=0.122449;ClusterMaxEditDist=0.145833;PBcalls=7;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=3518;DistForward=30499;DistMin=3518;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=12:59834241-59834308;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:34:1|0:7:32:24:1:0|1:34:1:0:18:0/1:27:19:./.:.:.:.:.:.
chr12	59927471	HG2_Ill_svaba_16457	AGTAGGATATTATGAATATTATCAATGGTTGTACCCTCATTGTGACATTAGGTGTAACATCTCC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_13237:HG3_PB_assemblyticsfalcon_5707:HG2_PB_pbsv_13239:HG4_PB_assemblyticsfalcon_5627:HG4_PB_HySA_19288:HG4_Ill_svaba_16514:HG4_Ill_scalpel_12173:HG4_Ill_manta_3109:HG4_Ill_Krunchall_18327:HG4_Ill_GATKHC_21151:HG4_Ill_GATKHCSBGrefine_9126:HG4_Ill_250bpfermikitraw_17492:HG4_Ill_150bpfermikitraw_16826:HG2_PB_assemblyticsPBcR_5519:HG2_PB_HySA_24064:HG2_Ill_svaba_16457:HG2_Ill_manta_3667:HG2_Ill_breakscan11_1892:HG2_Ill_Krunchall_18007:HG2_Ill_GATKHC_21155:HG2_Ill_GATKHCSBGrefine_8852:HG2_Ill_250bpfermikitraw_17665:HG2_Ill_150bpfermikitraw_16631;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16631:HG2_Ill_250bpfermikitraw_17665:HG2_Ill_GATKHCSBGrefine_8852:HG2_Ill_GATKHC_21155:HG2_Ill_Krunchall_18007:HG2_Ill_breakscan11_1892:HG2_Ill_manta_3667:HG2_Ill_svaba_16457:HG2_PB_HySA_24064:HG2_PB_assemblyticsPBcR_5519:HG4_Ill_150bpfermikitraw_16826:HG4_Ill_250bpfermikitraw_17492:HG4_Ill_GATKHCSBGrefine_9126:HG4_Ill_GATKHC_21151:HG4_Ill_Krunchall_18327:HG4_Ill_manta_3109:HG4_Ill_scalpel_12173:HG4_Ill_svaba_16514:HG4_PB_HySA_19288:HG4_PB_assemblyticsfalcon_5627;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0967742;ClusterMaxSizeDiff=0.0967742;ClusterMaxEditDist=0.0967742;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-63;DistBack=58185;DistForward=-50;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=12:59927470-59927546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:20:./.:15:10:10:7:0|1:44:2:0:19:0/1:42:26:./.:.:.:10807:.:.
chr12	60521839	HG2_PB_SVrefine2Falcon2Bionano_6543	TTGTCTACAGGGTTTCTACATATGTGCTTCATATACAGCCAAAACCTACTCAAAGAAGGTAGGGGTAGATTTCTTTTCAAATCCCATTGATCTTAATGAGATGTTTTCCTTGCCTTACATCTTTGGTTCCACATAGTGGACTGTCCCTTCATTGAAAGAGCTATAAATTACCATGTGTCTAGTGCTCTAATCAGAGAGACATACTGTACAATTTTTGCATTCTTCCTATTGTTTAAAGGGTCATGTGTCTTTTTATTCACCCCACAACCCATGCTTCAGCTTTCCTTGCTTTAGATTCCTAACTCACTGTTCACTAAATTAGCTGTGGGCCTTGTCCTTAATCTGAGGCTAGGAGAGCATATGCATCCAGACACTTCTAAAACTGCTCTTGTGGTAAACATTAATGCTGTTTGGTCAAGAACAGTGTGTGGAAATTAGTTCTCCCAGAAATGGAAATCATAAGCACCTCTTGATGGTTTCAGCCCACGTAGGTAAAGTAAATAACACCTGTGGCATTCATCCTTTTTCCTAGTATCATTGTTTTAAGGCCCAGAAACACAATACACGTTTACAAAAGTAATGGTATATGTTGAGAGATAGAATTATTTTAACATTGAATGGTTTTCATCCTATTTGGGGTGACTTTGATAAGATGCTATCAATCTCGCATATGTATATGAGATTTCTTAAAAATTGAATTAGAAACATATAATTGTGGTGTGTTGATTTGGGAAGGTGAAAACACATAGAAATTTAGTATGTTTCAGAAATGAGGTAACAAGTGGGTGGAGACAATAAGGTGGGAGCCAAGGGAACAGAAACAAAGGGAGTTCTGGATTAAGGTGAAGATAAAGGCAGGAGAGAGAACAGCAGGGGATAAGCAAATATATTATTGGATATATCAATCCTAAAACAAATTAATAGATAGAGTGAAATGGACAGGCTGAGTAGAAGCAGGTAGATGTATCCTAAGTAGAGGCTAACTATTCTTTGTGGATATAAAGAAAGGTAAGCAGTGTGGCAACATCAGAGAGAGTTTCTAGCAGGAGCTGGTATGGTTCTCATGTTGATCATTTGCCTTTAGTCTGGTGGTAATAATCATAAATGGCTTTGCACTTCCTCCCTTCCTTCTGGATTGGAAATTTGACCTGGTAATTTTAGGTAAACCTCATTCATCCAAATAGTTAAAGCTTTTTGCAAAGTATATTCTTTGGAGCATTGGTCTTGCAACCCTCCTTTAAAATACATGTTCCTGAAATTCTGCATATTGTACCCTTCACTTTGAAATCTTCAAAGCATACTGGTAATTCAAAAGCATTATAAGGTCTTGCTCTGCTATAGACTGAAAGTTTTAGTTCCTTAAAACTTCATATATTGAAATCCTGTCCACCATTATGAGAGTATTAGGAGGTGAGTCCTTTGGTAGGTGATTAGGTCCATCCTCGTGAACAGGTGAACGGGATTAGTGTCTTTATAAAAAAAGACTTCAGAAAGCTCACTTCTTCTGCCATATTAGGATACAAGGAGAAAATGCACATCTATGAAACCAGAAGGAGTCCCTCATCAGGCACCAATCTACCAGCACCTTGATCTTGGACTTTCCAGCTGCCAGACCTGTCAGAAGGAAATTTCTGTTGTTTACAAGCAATCTATTCTGTTATAGCAGCCTAAACTTAAGGCATGCTTAAAAGAAATGTGATTATCCTGTGTAACTCAAACTTCCCCAGATTCTTTAACCAGGTGTTCATTTATTAATTTTTACTTGTACTAGTATACCATTTGACATTGTATACAATAGACTAAAAAATGTGATATTAGTCAATCTGTTTAACTTAGAATAGCCTTTAGACGTCTGCAAGGAGTTTTATTATTGTTATGAAATCTTTTACTTTATAGGTCTCAAGTTCCCATTTTCTTGTATAAAAAGATTTCTAAATACAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTTCTAAATATTTTATTATTATAGTGAAACAATCATTTTAAATTTAAATTTGTGGAATTAATATAAAGAAACCAGAAATTGGAGGGTCATACAAATGTGAGTTCACGTTTTGCTCTACTACTCATTAGTTACGTCAACAGTGATCATTATTTAAAATCACTGTGTTGTACTGTCTTCTAGAAGAGAAAAAAAGATTGTAATGTGTCTTTTATGTGGTGATTGTGAGGATTAAATGAAATAGGACAATATATACAAAAGCAATTATTTTTGTTCCGATCTCACATAAGTCATTCAATCAATGTTATTTTCATTGTTATTTTCCCCTTTAATGAAATGTATCTTTTTCATAGTTTCCTACTTGTGAGAATAATGTGTCTAATAATAGTTTTTAAAACTATATTCTCAAATATGTATATAAAACATTTTTCTTCCAGACAAATTATGGGAAAAATTTTAGCAAATACTTTTATTAATTTTTAAAAACAGTTTTAGTTTTTTATGACAAATATTTTGGAACTGAAAAATTCACATTAATTATTTTTAACAAGTGCTAATTTGCATCAAACTCTTACAATATGTTTTCCCTCTGATCCCAAGTTTTCTATTTTATGAATCTATCCTTAGATAATAATCACACAGTAGACAAATATGTATGTGTAGAAAGTTAATTGAAAGACTGTTTATAGTAATAAACCATAAATGAGAACAACTTATAGCCAATAAAACACTATGTTTAATATTTGCATAATATATTTTTAGAAAATTCTACTTGGATATACATCAGATTTTAACAACATCTCTTAGATATGAGAAATAAGCACACTTTTTTCCCTTCTTTTGTTATCCTGGATTTGCTATATTTTTCTACAATGAGTATTACTTGTATAAATTTCAAAATGGCAAAAATCAGTTGAAAAGAAGAATTACATTTTTCCTTTGAATTTTGAAGAACATTTTGAATATTTGTTAATTACCCTAAAAAAAGTCAAACTTGATTTAAATGAAATGCTTCAAACTTGGCTTAGTCATAGAAATTGCATGTTTTTCTGTATTCGCCCTAAATCTA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1476:HG3_10X_allpass_2590:HG2_10X_allpass_2133:HG4_10X_allpass_2500:HG4_Ill_Krunchall_18338:HG3_Ill_Krunchall_17674:HG2_Ill_Krunchall_18014:HG4_PB_pbsv_13245:HG4_PB_SVrefine2PBcRDovetail_6639:HG4_PB_SVrefine2Falcon1Dovetail_8069:HG4_Ill_SVrefine2DISCOVARDovetail_9430:HG4_Ill_MetaSV_1118:HG3_PB_pbsv_12927:HG3_PB_SVrefine2PBcRDovetail_6246:HG3_Ill_SVrefine2DISCOVARDovetail_9560:HG3_Ill_MetaSV_1151:HG3_Ill_GATKHCSBGrefine_8740:HG2_PB_pbsv_13246:HG2_PB_SVrefine2PBcRplusDovetail_2379:HG2_PB_SVrefine2PB10Xhap12_9559:HG2_PB_SVrefine2Falcon2Bionano_6543:HG2_Ill_breakscan11_1893:HG2_Ill_SpiralSDKrefine_3571:HG2_Ill_SVrefine2DISCOVARplusDovetail_2785:HG2_Ill_MetaSV_1047:HG2_10X_SVrefine210Xhap12_9265;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9265:HG2_Ill_MetaSV_1047:HG2_Ill_SVrefine2DISCOVARplusDovetail_2785:HG2_Ill_SpiralSDKrefine_3571:HG2_Ill_breakscan11_1893:HG2_PB_SVrefine2Falcon2Bionano_6543:HG2_PB_SVrefine2PB10Xhap12_9559:HG2_PB_SVrefine2PBcRplusDovetail_2379:HG2_PB_pbsv_13246:HG3_Ill_GATKHCSBGrefine_8740:HG3_Ill_MetaSV_1151:HG3_Ill_SVrefine2DISCOVARDovetail_9560:HG3_PB_SVrefine2PBcRDovetail_6246:HG3_PB_pbsv_12927:HG4_Ill_MetaSV_1118:HG4_Ill_SVrefine2DISCOVARDovetail_9430:HG4_PB_SVrefine2Falcon1Dovetail_8069:HG4_PB_SVrefine2PBcRDovetail_6639:HG4_PB_pbsv_13245;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00407332;ClusterMaxSizeDiff=0.00407332;ClusterMaxEditDist=0.00407332;PBcalls=9;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3196;DistBack=37960;DistForward=-3193;DistMin=-3193;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=12:60521840-60525041;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:36:1|0:7:22:35:3:1|0:0:27:49:0:0/1:52:21:0/1:246:109:3170:.:.
chr12	61302242	HG2_Ill_SVrefine2DISCOVARplusDovetail_2790	AAATATATATATATATATATACACATATATATATGTATATATATATATATATACATATATATATGTGTATATATATATATACATATATATATGTGTATATATATATATACATATATATGTGTATATATATATATACATATATATATGTGTATATATATATACACATATATATATATGTG	A	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_9564:HG3_PB_HySA_19950:HG3_Ill_scalpel_12720:HG3_10X_allpass_2592:HG2_PB_HySA_24077:HG4_PB_assemblyticsfalcon_5635:HG4_Ill_scalpel_12179:HG4_Ill_150bpfermikitraw_16836:HG4_10X_allpass_2501:HG3_PB_assemblyticsfalcon_5722:HG2_Ill_150bpfermikitraw_16637:HG3_Ill_scalpel_12719:HG2_Ill_scalpel_12480:HG2_Ill_manta_3670:HG2_Ill_MetaSV_1049:HG2_PB_assemblyticsfalcon_5728:HG4_PB_HySA_19295:HG3_PB_pbsv_12929:HG3_Ill_GATKHCSBGrefine_8742:HG2_PB_pbsv_13249:HG4_PB_pbsv_13248:HG4_Ill_GATKHCSBGrefine_9134:HG2_Ill_GATKHCSBGrefine_8863:HG3_PB_SVrefine2PBcRDovetail_6248:HG2_PB_SVrefine2PB10Xhap12_9561:HG2_PB_SVrefine2Falcon2Bionano_6545:HG2_PB_SVrefine2Falcon1plusDovetail_2511:HG2_Ill_SVrefine2DISCOVARplusDovetail_2790:HG2_10X_SVrefine210Xhap12_9269:HG4_PB_SVrefine2PBcRDovetail_6641:HG4_PB_SVrefine2Falcon1Dovetail_8070:HG4_Ill_SVrefine2DISCOVARDovetail_9433:HG3_PB_SVrefine2Falcon1Dovetail_7999:HG2_10X_SVrefine210Xhap12_9268;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9269:HG2_Ill_SVrefine2DISCOVARplusDovetail_2790:HG2_PB_SVrefine2Falcon1plusDovetail_2511:HG2_PB_SVrefine2Falcon2Bionano_6545:HG2_PB_SVrefine2PB10Xhap12_9561;NumExactMatchSVs=5;ClusterMaxShiftDist=0.208092;ClusterMaxSizeDiff=0.208092;ClusterMaxEditDist=0.228916;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-178;DistBack=-35;DistForward=-162;DistMin=-162;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=12:61302245-61302433;PctSeqSimilarity=0.9627;PctSizeSimilarity=0.9889;PctRecOverlap=0.9006;SizeDiff=-2;StartDistance=-16;EndDistance=-18;GTMatch=0;TruScore=95;MatchId=785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:76:1/1:0:7:2:40:./.:1:12:1:11:1/1:0:13:./.:.:.:.:.:.
chr12	61607113	HG2_10X_SVrefine210Xhap12_9270	CAAAGGTCAAATTTGTAAAAGATGGGCTGAGAGGAGTGATGAAGCTGTAATAATCCTATCATCCTCCCTCGACTTTAGTTTTATTTTATTGAGCTTAACAATATGAGGTGAAAGGGT	C	20	PASS	ClusterIDs=HG4_PB_HySA_19298:HG4_Ill_Krunchall_18343:HG2_Ill_Krunchall_18017:HG4_Ill_Spiral_1038:HG2_Ill_Spiral_893:HG4_PB_SVrefine2PBcRDovetail_6642:HG4_Ill_svaba_16521:HG4_Ill_manta_3111:HG4_Ill_GATKHC_21165:HG4_Ill_GATKHCSBGrefine_9136:HG4_10X_allpass_2502:HG2_PB_pbsv_13250:HG2_PB_SVrefine2PBcRplusDovetail_2381:HG2_PB_SVrefine2PB10Xhap12_9562:HG2_PB_SVrefine2Falcon1plusDovetail_2512:HG2_Ill_svaba_16463:HG2_Ill_breakscan11_1894:HG2_Ill_SpiralSDKrefine_3574:HG2_Ill_GATKHCSBGrefine_8865:HG2_10X_allpass_2134:HG2_10X_SVrefine210Xhap12_9270:HG4_PB_pbsv_13250:HG2_PB_assemblyticsfalcon_5731:HG2_PB_assemblyticsPBcR_5530;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9270:HG2_10X_allpass_2134:HG2_Ill_GATKHCSBGrefine_8865:HG2_Ill_SpiralSDKrefine_3574:HG2_Ill_breakscan11_1894:HG2_Ill_svaba_16463:HG2_PB_SVrefine2Falcon1plusDovetail_2512:HG2_PB_SVrefine2PB10Xhap12_9562:HG2_PB_SVrefine2PBcRplusDovetail_2381:HG2_PB_pbsv_13250:HG4_10X_allpass_2502:HG4_Ill_GATKHCSBGrefine_9136:HG4_Ill_GATKHC_21165:HG4_Ill_manta_3111:HG4_Ill_svaba_16521:HG4_PB_SVrefine2PBcRDovetail_6642;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0792952;ClusterMaxSizeDiff=0.0792952;ClusterMaxEditDist=0.0969163;PBcalls=9;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-116;DistBack=10676;DistForward=31151;DistMin=10676;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9466;REFWIDENED=12:61597650-61614653;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=786.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:35:0|1:34:2:2:22:0|1:28:0:0:30:0/1:36:13:./.:.:.:.:.:.
chr12	62295031	HG2_PB_pbsv_13254	TCAATTTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCATATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGAC	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_13778:HG4_PB_assemblyticsfalcon_5643:HG3_PB_assemblyticsfalcon_5727:HG2_PB_assemblyticsfalcon_5738:HG2_PB_assemblyticsPBcR_5538:HG4_Ill_Krunchall_18352:HG3_Ill_Krunchall_17681:HG4_Ill_Spiral_1039:HG2_Ill_Spiral_894:HG4_PB_HySA_19305:HG2_PB_HySA_24086:HG4_Ill_MetaSV_1120:HG3_Ill_MetaSV_1154:HG2_Ill_MetaSV_1051:HG4_PB_pbsv_13252:HG4_PB_SVrefine2PBcRDovetail_6643:HG4_PB_SVrefine2Falcon1Dovetail_8073:HG4_Ill_svaba_16528:HG4_Ill_manta_3113:HG4_Ill_SVrefine2DISCOVARDovetail_9437:HG4_Ill_GATKHCSBGrefine_9138:HG4_10X_allpass_2503:HG3_PB_pbsv_12933:HG3_PB_SVrefine2PBcRDovetail_6250:HG3_PB_SVrefine2Falcon1Dovetail_8002:HG3_Ill_svaba_16615:HG3_Ill_scalpel_12726:HG3_Ill_manta_2999:HG3_Ill_SVrefine2DISCOVARDovetail_9567:HG3_Ill_GATKHCSBGrefine_8747:HG3_10X_allpass_2593:HG2_PB_pbsv_13254:HG2_PB_SVrefine2PBcRplusDovetail_2383:HG2_PB_SVrefine2PB10Xhap12_9565:HG2_PB_SVrefine2Falcon2Bionano_6548:HG2_PB_SVrefine2Falcon1plusDovetail_2515:HG2_Ill_svaba_16470:HG2_Ill_scalpel_12485:HG2_Ill_manta_3672:HG2_Ill_SpiralSDKrefine_3581:HG2_Ill_SVrefine2DISCOVARplusDovetail_2792:HG2_Ill_GATKHCSBGrefine_8868:HG2_Ill_250bpfermikitraw_17679:HG2_Ill_150bpfermikitraw_16646:HG2_10X_allpass_2135:HG2_10X_SVrefine210Xhap12_9271;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9271:HG2_10X_allpass_2135:HG2_Ill_150bpfermikitraw_16646:HG2_Ill_250bpfermikitraw_17679:HG2_Ill_GATKHCSBGrefine_8868:HG2_Ill_SVrefine2DISCOVARplusDovetail_2792:HG2_Ill_SpiralSDKrefine_3581:HG2_Ill_manta_3672:HG2_Ill_scalpel_12485:HG2_Ill_svaba_16470:HG2_PB_SVrefine2Falcon1plusDovetail_2515:HG2_PB_SVrefine2Falcon2Bionano_6548:HG2_PB_SVrefine2PB10Xhap12_9565:HG2_PB_SVrefine2PBcRplusDovetail_2383:HG2_PB_pbsv_13254:HG3_10X_allpass_2593:HG3_Ill_GATKHCSBGrefine_8747:HG3_Ill_SVrefine2DISCOVARDovetail_9567:HG3_Ill_manta_2999:HG3_Ill_scalpel_12726:HG3_Ill_svaba_16615:HG3_PB_SVrefine2Falcon1Dovetail_8002:HG3_PB_SVrefine2PBcRDovetail_6250:HG3_PB_pbsv_12933:HG4_10X_allpass_2503:HG4_Ill_GATKHCSBGrefine_9138:HG4_Ill_SVrefine2DISCOVARDovetail_9437:HG4_Ill_manta_3113:HG4_Ill_svaba_16528:HG4_PB_SVrefine2Falcon1Dovetail_8073:HG4_PB_SVrefine2PBcRDovetail_6643:HG4_PB_pbsv_13252;NumExactMatchSVs=32;ClusterMaxShiftDist=0.149584;ClusterMaxSizeDiff=0.149584;ClusterMaxEditDist=0.149584;PBcalls=17;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-186;DistBack=49447;DistForward=54186;DistMin=49447;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=12:62295032-62295231;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:1:33:0:20:1/1:0:23:0:17:1/1:0:45:./.:.:.:.:.:.
chr12	62404616	HG2_Ill_150bpfermikitraw_16647	AGCCCTTCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCCGCCCTTCGTCTGGGAGGTGGGGAGCGCCTCTGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_16647:HG2_Ill_SpiralSDKrefine_3582:HG4_PB_pbsv_13253:HG2_PB_pbsv_13255:HG3_PB_pbsv_12935:HG3_Ill_GATKHC_21047:HG3_Ill_GATKHCSBGrefine_8749:HG2_Ill_GATKHCSBGrefine_8869:HG2_Ill_250bpfermikitraw_17680;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16647:HG3_Ill_GATKHC_21047:HG3_Ill_GATKHCSBGrefine_8749:HG2_Ill_GATKHCSBGrefine_8869:HG2_Ill_250bpfermikitraw_17680;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0128205;ClusterMaxSizeDiff=0.0127389;ClusterMaxEditDist=0.0503145;PBcalls=3;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=-40;DistForward=-19;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=61;REFWIDENED=12:62404615-62404756;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=788.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:1:9:0:8:./.:0:2:0:2:./.:0:6:./.:.:.:.:.:.
chr12	65060926	HG2_PB_SVrefine2PBcRplusDovetail_2391	ATTGGGAATTTCTAAGGTGTGTTTTTGTTTTTAAAACAATATCTGTACTTTCAAAAATATGGTTTCTTTGCTGCAAGGGGAACACATTTATTTTGTGAAAGTAAGTGTACCTAGTTAACAGTTTCCATTTATTAATTTCTGGAATAGTGTTTTGGTTACTTGGAATGTGTGTGTGTATTTTCTTTCTTTCTTTCTTTTTGAGACAGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCCATCTCGGCTTACTGTAGCCTCTGCCTCCCAGGTTCAAGCGATTCTCCCGCCTCAGCCTCCCAAAGTACTGGGATTACAGGTGTGAGCCACTGCGCCCGGCCTATTTTCTTTCTATTACAAGTCCCTTGCGGGAAAGATGGTCGTAGCTCCTATTCTAAATGAACAGAAGTTCTGTCTTAGAAATTTTCCCATTTTACAAGTGTTCAAAGAGGACCAAATTTCATCCTCTTTCCCTGCCTGTGTCCTGGAATCAGCTGAGAAGAAAGACAGGAGTAAGGTGGTCTTCAATTCAGCCAGTCTTCAATTGTTGGAGACCAAAATTTACCTTTATGCTGATCAGGGTTAGAGCTGCTATGCAGAACATGGCTTATCTCTGCGGGCAAGTGGCCTTCCTGAGGCTCATCTCCAGAGCTGTGCAGCAGAATGTTGCCCTCAAAAGAGGACAGAGGGCAGGACTGGCTATGCATGCATGCTCACTCCCTTCTTCCAGATTCACTGAGCCTGTTTTCCTTCTGAATTAAGAGGTAAGAAAGTAACACCTGGAAAGATGTACTTTCCCAAGGTCACGCAGATAGCTGGCAACAGGTTTTTCTCCTGGGCTCTAGAGGCCTTTGGTCTGAGTAGAAAGGGCATGGTTATGGGGTTGGCCAGGCCTTGTGTTCACCACATTCTGCTTCTGTGCTCTTAGCTTTCATTTCTGCATCTATACCATGGGGTTAAAATTTCTACCCTCGGGATTCCTGGGAGGGTTACCTAAGGTGTAACTGTTGAATGACCTGAACCAGTGCTTTGCACTCAGAATCAGCAATGTAAATATCACTCAGCCAGCCTGGGGCACTTTCCTCTATCAAACCTTACCAATCCTTTTCTTCTTCTTCTTCTTTTTTTTTTTTTCTCTTCAATTGAAACAGGGTCTCACTGTCTTGCCCAGGCTGAGGTGGAATGTGGCACAATCTCCGTTCACTGTAGCTTCCACTTCACAGGCTCAATCAATTCTCCAGCCTTAGCCTCCAAGTAGCTATAGGCACGTGCCATCACACCTGGCTAGTTTTTGTATTTTTTGTAGAGATGGGTTTTCACCATGTTGCCTAGGCTGGTCTCAAACTCCTGAGCTCAAAGCGATCTGCCTGACTTAGGCTTCGAAAATGCTGGGATTACAGGTGTGAGCCACCATGTCCAGCCTCGTTGTTCTTTCTTTTAATCACCCTGGCTTGGCACCTCAGAAAACATGGTGATTGGAGTTTAGCTTTCAGCAGGGTGGGACTTGGATGTTGACTGTTTTAATTTTGATTTTTTTTTTTTTTTTTTTGAAACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCGTTGTGAGTAGCTGGGACTACAGGCGCCTGCCACCGCACCCAGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCTACCGCACCCAGCCCAATTTTGATTTTTTAGGAGGAAAAAAAATTGTTCCTAAGGAAGTCAAGTCCTAAATTGAAAGACTTTCATATATTACACAAACCCTAGAAAAACTTGGGTTACACCTGGGATTGATTTTGAAGTAGGGCGTTGAACTATGTGTCCTGTTTAACCTCGAGGAGCAAATGGCTTTCCATTCTAAACATTCTCATTTCTTCTCTGGGACATTCTTTAGGTGCTTGTTTGAGTTTCTGTTTTGTTAGGCACATTAGAGGACTCTATATGAACAAGTTCCTAGGGGAGGAAATTGGTGACTTAGATGAAAGGGTGAAAAAGGTGAAACCTTCACATTATTGTGTAAGGGATTGTCCCAGAATGTGTGAAATTTGATGTAGTCCTTCTTGGCTTCGTTTTTTCCTCAGATGTTCTGGATGAAACAGTTCCCCCTGTCACACGTGGAGATAAGGATGTGGCTCTAGGCAGGGCATATCCTGTGTTTAAGACTGTGTTGACTCTTCTTTTACAGTGTCTGCCAC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9279:HG4_PB_pbsv_13268:HG4_10X_allpass_2506:HG2_10X_allpass_2137:HG2_PB_assemblyticsPBcR_5555:HG2_PB_pbsv_13267:HG2_Ill_Krunchall_18048:HG2_Ill_tnscope_1477:HG4_Ill_MetaSV_1124:HG2_PB_SVrefine2PBcRplusDovetail_2391:HG2_PB_SVrefine2PB10Xhap12_9573:HG2_PB_SVrefine2Falcon2Bionano_6552:HG2_Ill_breakscan11_1896:HG2_Ill_SpiralSDKrefine_3605:HG2_Ill_MetaSV_1055;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9279:HG4_Ill_MetaSV_1124:HG2_PB_SVrefine2PBcRplusDovetail_2391:HG2_PB_SVrefine2PB10Xhap12_9573:HG2_PB_SVrefine2Falcon2Bionano_6552:HG2_Ill_breakscan11_1896:HG2_Ill_SpiralSDKrefine_3605:HG2_Ill_MetaSV_1055;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0207759;ClusterMaxSizeDiff=0.0207759;ClusterMaxEditDist=0.0207759;PBcalls=6;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-2339;DistBack=12272;DistForward=-2339;DistMin=-2339;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:65060927-65063268;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:75:0|1:32:2:6:37:0|1:46:0:0:19:0/1:58:18:0/1:181:69:2333:.:.
chr12	65134827	HG4_Ill_svaba_16553	TAGAAAATGGGCAAATAGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9280:HG4_PB_pbsv_13272:HG2_PB_pbsv_13270:HG4_Ill_Krunchall_18378:HG2_Ill_Krunchall_18050:HG4_Ill_svaba_16553:HG4_Ill_scalpel_12203:HG4_Ill_manta_3118:HG4_Ill_SVrefine2DISCOVARDovetail_9448:HG4_Ill_MetaSV_1125:HG4_Ill_GATKHCSBGrefine_9152:HG4_Ill_250bpfermikitraw_17533:HG4_Ill_150bpfermikitraw_16871:HG4_10X_allpass_2507:HG2_PB_SVrefine2PB10Xhap12_9574:HG2_PB_SVrefine2Falcon2Bionano_6555:HG2_PB_HySA_24120:HG2_Ill_svaba_16494:HG2_Ill_scalpel_12507:HG2_Ill_manta_3677:HG2_Ill_breakscan11_1898:HG2_Ill_SpiralSDKrefine_3607:HG2_Ill_SVrefine2DISCOVARplusDovetail_2798:HG2_Ill_MetaSV_1056:HG2_Ill_GATKHCSBGrefine_8877:HG2_10X_allpass_2138;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9280:HG4_Ill_svaba_16553:HG4_Ill_scalpel_12203:HG4_Ill_manta_3118:HG4_Ill_SVrefine2DISCOVARDovetail_9448:HG4_Ill_MetaSV_1125:HG4_Ill_GATKHCSBGrefine_9152:HG4_Ill_250bpfermikitraw_17533:HG4_Ill_150bpfermikitraw_16871:HG4_10X_allpass_2507:HG2_PB_SVrefine2PB10Xhap12_9574:HG2_PB_SVrefine2Falcon2Bionano_6555:HG2_PB_HySA_24120:HG2_Ill_svaba_16494:HG2_Ill_scalpel_12507:HG2_Ill_manta_3677:HG2_Ill_breakscan11_1898:HG2_Ill_SpiralSDKrefine_3607:HG2_Ill_SVrefine2DISCOVARplusDovetail_2798:HG2_Ill_MetaSV_1056:HG2_Ill_GATKHCSBGrefine_8877:HG2_10X_allpass_2138;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00566572;ClusterMaxSizeDiff=0.00566572;ClusterMaxEditDist=0.00568182;PBcalls=5;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-176;DistBack=22727;DistForward=-172;DistMin=-172;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:65134828-65135019;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:0|1:32:0:1:23:0|1:41:0:0:21:0/1:14:25:./.:.:.:.:.:.
chr12	66451372	HG4_Ill_GATKHCSBGrefine_9156	ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_5763:HG4_PB_HySA_19335:HG4_Ill_svaba_16557:HG3_Ill_svaba_16645:HG2_Ill_svaba_16498:HG2_PB_HySA_24128:HG2_PB_assemblyticsPBcR_5567:HG4_PB_assemblyticsfalcon_5679:HG3_PB_HySA_19994:HG4_Ill_GATKHC_21212:HG4_Ill_GATKHCSBGrefine_9156:HG4_Ill_150bpfermikitraw_16875:HG3_PB_assemblyticsfalcon_5750:HG3_Ill_GATKHC_21086:HG3_Ill_GATKHCSBGrefine_8762:HG3_Ill_150bpfermikitraw_16719:HG2_Ill_Krunchall_18054:HG2_Ill_GATKHC_21208:HG2_Ill_GATKHCSBGrefine_8881:HG2_Ill_150bpfermikitraw_16673:HG4_PB_pbsv_13279:HG3_PB_pbsv_12954:HG2_PB_pbsv_13275;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16673:HG2_Ill_GATKHCSBGrefine_8881:HG2_Ill_GATKHC_21208:HG2_Ill_Krunchall_18054:HG3_Ill_150bpfermikitraw_16719:HG3_Ill_GATKHCSBGrefine_8762:HG3_Ill_GATKHC_21086:HG3_PB_assemblyticsfalcon_5750:HG4_Ill_150bpfermikitraw_16875:HG4_Ill_GATKHCSBGrefine_9156:HG4_Ill_GATKHC_21212;NumExactMatchSVs=11;ClusterMaxShiftDist=0.028169;ClusterMaxSizeDiff=0.028169;ClusterMaxEditDist=0.0425532;PBcalls=10;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=23175;DistForward=10434;DistMin=10434;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=12:66451374-66451462;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=791.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:54:1/1:0:25:3:21:./.:0:11:1:10:1/1:0:17:./.:.:.:.:.:.
chr12	66527635	HG3_PB_SVrefine2Falcon1Dovetail_8011	TGAAAATGGTATTAATAGCGTGCAAAAATGTAAGGGGGCCTCTCCCTCTCCCTCTCCCTCTCCGTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCACTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACACCTGACTGGTCTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCCGGTCTCCAGCCCCTGACCGCGAGTGATCCGCCAGCCTTGGCCTCCCGAGGTGCCAGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGACTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACGGCCTACACCTCCCAGCCGCCTGCCTTGGCCTCCCACGGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCTGCCCATCGTCTGGGATGTGAGGAGCCTCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTGCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGTGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTGTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCTGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTCGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCAGCCTGGCCAGCTGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCAGCCAGCCGCCCTGTCCAGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCTGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTTTGCCCGGCCAGCCGCCCAGTCTGGGAGGGAGGTGGGGGGGTCAGCCCCCTGCCCGGCCAGCTGCCCCGTCCGGGAGGTGAGGGGCACCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCTGCCCCGTCTGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCCGCCCGGCCAGCTGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCAGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAAGGGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCTGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCTGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACAACCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1899:HG2_PB_PB10Xdip_7620:HG4_Ill_Krunchall_18383:HG2_Ill_Krunchall_18056:HG4_PB_assemblyticsfalcon_5682:HG4_10X_allpass_2509:HG2_10X_allpass_2139:HG2_PB_pbsv_13277:HG2_Ill_tnscope_1478:HG4_PB_pbsv_13281:HG4_Ill_SVrefine2DISCOVARDovetail_9455:HG4_Ill_MetaSV_1129:HG4_Ill_GATKHCSBGrefine_9159:HG3_PB_SVrefine2Falcon1Dovetail_8011:HG2_PB_SVrefine2PBcRplusDovetail_2395:HG2_PB_SVrefine2PB10Xhap12_9578:HG2_PB_SVrefine2Falcon2Bionano_6559:HG2_Ill_MetaSV_1059:HG2_Ill_GATKHCSBGrefine_8883:HG2_10X_SVrefine210Xhap12_9284;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9284:HG2_Ill_GATKHCSBGrefine_8883:HG2_Ill_MetaSV_1059:HG2_PB_PB10Xdip_7620:HG4_PB_pbsv_13281:HG4_Ill_SVrefine2DISCOVARDovetail_9455:HG4_Ill_MetaSV_1129:HG4_Ill_GATKHCSBGrefine_9159:HG3_PB_SVrefine2Falcon1Dovetail_8011:HG2_PB_SVrefine2PBcRplusDovetail_2395:HG2_PB_SVrefine2PB10Xhap12_9578:HG2_PB_SVrefine2Falcon2Bionano_6559;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0120751;ClusterMaxSizeDiff=0.0120751;ClusterMaxEditDist=0.0120751;PBcalls=8;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2241;DistBack=13396;DistForward=-2225;DistMin=-2225;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:66527636-66529892;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=792.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:33:0|1:34:0:0:14:0|1:64:0:0:26:0/1:25:13:0/1:171:68:2221:.:.
chr12	66678525	HG2_Ill_Cortex_1868	TCAGCCTTAGCAAAGTAAAGAAAATCATATTTTTGCACACTGAGTGTGTACAAGCCTATAAAATATTACCTTTACAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_1042:HG2_PB_PB10Xdip_7621:HG2_PB_assemblyticsPBcR_5570:HG2_PB_assemblyticsfalcon_5766:HG2_PB_HySA_24132:HG4_PB_pbsv_13282:HG4_Ill_svaba_16562:HG4_Ill_scalpel_12208:HG4_Ill_manta_3120:HG4_Ill_Krunchall_18387:HG4_Ill_GATKHC_21220:HG4_Ill_GATKHCSBGrefine_9160:HG4_Ill_Cortex_764:HG4_Ill_250bpfermikitraw_17545:HG4_Ill_150bpfermikitraw_16882:HG4_CG_vcfBeta_8423:HG4_10X_allpass_2510:HG2_PB_pbsv_13278:HG2_PB_SVrefine2PBcRplusDovetail_2396:HG2_PB_SVrefine2PB10Xhap12_9579:HG2_PB_SVrefine2Falcon2Bionano_6560:HG2_PB_SVrefine2Falcon1plusDovetail_2525:HG2_Ill_svaba_16503:HG2_Ill_manta_3679:HG2_Ill_breakscan11_1900:HG2_Ill_SpiralSDKrefine_3613:HG2_Ill_Krunchall_18059:HG2_Ill_GATKHC_21219:HG2_Ill_GATKHCSBGrefine_8884:HG2_Ill_Cortex_1868:HG2_Ill_250bpfermikitraw_17718:HG2_Ill_150bpfermikitraw_16678:HG2_CG_vcfBeta_7510:HG2_10X_allpass_2140:HG2_10X_SVrefine210Xhap12_9285;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9285:HG2_10X_allpass_2140:HG2_CG_vcfBeta_7510:HG2_Ill_150bpfermikitraw_16678:HG2_Ill_250bpfermikitraw_17718:HG2_Ill_Cortex_1868:HG2_Ill_GATKHCSBGrefine_8884:HG2_Ill_GATKHC_21219:HG2_Ill_Krunchall_18059:HG2_Ill_SpiralSDKrefine_3613:HG2_Ill_breakscan11_1900:HG2_Ill_manta_3679:HG2_Ill_svaba_16503:HG2_PB_SVrefine2Falcon1plusDovetail_2525:HG2_PB_SVrefine2Falcon2Bionano_6560:HG2_PB_SVrefine2PB10Xhap12_9579:HG2_PB_SVrefine2PBcRplusDovetail_2396:HG2_PB_pbsv_13278:HG4_10X_allpass_2510:HG4_CG_vcfBeta_8423:HG4_Ill_150bpfermikitraw_16882:HG4_Ill_250bpfermikitraw_17545:HG4_Ill_Cortex_764:HG4_Ill_GATKHCSBGrefine_9160:HG4_Ill_GATKHC_21220:HG4_Ill_Krunchall_18387:HG4_Ill_manta_3120:HG4_Ill_scalpel_12208:HG4_Ill_svaba_16562:HG4_PB_pbsv_13282;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0657895;ClusterMaxSizeDiff=0.0657895;ClusterMaxEditDist=0.0657895;PBcalls=10;Illcalls=20;TenXcalls=3;CGcalls=2;PBexactcalls=6;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=2;HG2count=22;HG3count=0;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-76;DistBack=68956;DistForward=9322;DistMin=9322;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:66678526-66678604;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=793.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:22:1|0:4:20:13:0:0|1:32:0:0:13:0/1:42:15:./.:.:.:.:.:.
chr12	67117005	HG4_Ill_GATKHC_21223	TCTCTCTCTCTCTCTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_13283:HG2_PB_assemblyticsPBcR_5573:HG4_PB_assemblyticsfalcon_5687:HG3_PB_pbsv_12958:HG4_Ill_svaba_16565:HG4_Ill_GATKHC_21223:HG4_Ill_GATKHCSBGrefine_9161:HG3_PB_assemblyticsfalcon_5756:HG2_PB_assemblyticsfalcon_5770:HG2_PB_HySA_24137:HG4_Ill_svaba_16564:HG2_Ill_svaba_16505:HG2_Ill_GATKHCSBGrefine_8885:HG2_PB_pbsv_13280;NumClusterSVs=14;ExactMatchIDs=HG2_PB_assemblyticsfalcon_5770:HG3_PB_assemblyticsfalcon_5756:HG4_Ill_GATKHCSBGrefine_9161:HG4_Ill_GATKHC_21223:HG4_Ill_svaba_16565;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.211382;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=105416;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=49;REFWIDENED=12:67116978-67117084;PctSeqSimilarity=0.9672;PctSizeSimilarity=0.9355;PctRecOverlap=0.9365;SizeDiff=-4;StartDistance=4;EndDistance=0;GTMatch=0;TruScore=94;MatchId=794.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:51:1/1:4:19:4:13:./.:0:13:1:12:1/1:0:9:./.:.:.:.:.:.
chr12	71602357	HG4_Ill_MetaSV_1135	TTACTGTAAATTGAACATCAAAATAAAAGCACAAGAGAGTTTTCTTAAAGCACTAATCTGCTCTTTAACAAAAATTTATAAAGGGTTATAAAAGGTTTATAAAAATCTTGCCATATGATCAAACTGATTAAGATTGGGTAGACTTGTCTATGAGGTTTTATTAAAAATTGGGATTGACATTAATAGTCTGCTAATGCAAGGGTGAAATTTGGCTTTCTTTCTTAAACAAGATTTTCAAGTAATATTAAAAGATAAGATAATGAAAGAGTTTTGTTTGCCTTTTAAATATACTATGAAAGAGAAAAGAAAAAGAAGGGAAAGACAAAAGACAGATTGTGTGGAAAGCTAAGTCTTCCTTCTATCAATGAGTAAAGGTTTTTGCCTTTTTAAACATTTCTGAGTCATCATTTTGATTAAATGAATGACTTATGGTGACCTGGAATTCTATTTCATAATATCAAGTGTTTTAAATCTTTAACATATTTAATAGGTTTCCCAAAATCAAATTTCAGCTTCAAAATGGTCTTTTCTGACCCCTTAACTTTGTAATGCTACAGACGGCATCCAAAAGAGAGGTAAACAGAATTATTTAACATGTTAAGTTACATGGGAAGCATTGTCAAAATAAAAATAATGTTTAATCTTCAAGTTATATTTTAGTGAATGATATTAATATGTGTTCCAAAATTGTATGGGATTTCTAAAATCCTAATATGCCTGAGTATATGCTATCAGTCATAATCATGGTTATTATGTTAAGTTATTGTGCACCACAGAAATAACCAAATTTCCTTGTATAAAACTGCTAACCCAAGTAGAACAAAAAAATTAACTAAATGTCAAGAAAACACTTTGCCAGATTTTCACGTTAAACCAGGCAATACTGAAATTGTTTACATATACAATTTGAACTCCATGTTCTAAGTCAACTTACCTATAATGACCCACTAGTTATCAATGCTATGCACCTAAATTGGAGAAACAACAAGTATTCAAGAGGACATAAGTCCAGTGTTAAGTATGGACTCATGGAGAACCAGGGCACCCTCCTTGTCCTTCCTGAGTCCTTAAAACTTGTGTTATTAAAGGTTCTGCATTCCACAATTCATCATGGAGAAAAATAAAATGATTTAAATTGAATATATTGATATGGTGACTTACAAATTGTGAAAGTAGTTTAAAACCAATGTTTGGTTCTATATTCCTGGGAAGACAATCAAACCTTCAGGTATATTTGGCTGCCTGATGGGTCATTTAAACATTTATAAAGATATTTTGTTCAATTGTCATTTTCAATCATGTTTTTTGTTATAAAAGTTAATTATTATGTCACAGTATATTTTCACCAGGTAAATAAAGCTTTTTATGGTTCACTGAGGACAATCAATTCCTTCACAATCTAGAACCTGAAGATTGAATATTCTGTGACCATCAGAGAAAGACTCTCCTTGCCATCCACACTGCAACAAAACTTTGGAACCTTGTACGTTGGATTCATAACCAAACAACTGAGAAGGGTCCCTCCATACTCTTGGAATTGTACACCCATTGGAACCCTTAAGGTAAAATGAACCAAGAAAGTTTCTCCCCAGAGGAAGATGGAATACTTGATGTGAACAGCTTTTCCCAAGATCACGAATCAAGACTTCTACTATCATGAGACTCTTATCTTTGAATATTTTTTACTTGTTTATGCTTCTATGAATAATAGAAATGGAAAGGAGGTCTATTATGTGCACTTAGAGGGTATATTTTTATTTGTGAAGGATTTTGCACCCAGCCTTATACATGAATAACCTTATACTTTGATAGATAAAAGATGAAGGCCCCATGTAGGTGAGAAACTTTAGTGGTACATACATTGCCTCATAATCAGTCAAAACTCCTCTTAACCCACATCATGGGTTAAAGAGAACATTGCAAGAAGCCCTTTATTCTTCTAGAAGGACACCATTTATTAGGTCCTTTTTCCATGGTTTAAAATAAAAGAGGCAATAATTAGAAATGCATCCCTCATAAGAGGCTCTATAGCAGATTCTACTATAAAGGCTATCATTACACAACAGACTTTATCTTGTGAAAGTTATGCTAATAATAGAGTTGGCTAAAAAGAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1482:HG4_PB_pbsv_13301:HG4_10X_allpass_2513:HG2_10X_allpass_2143:HG3_Ill_Krunchall_17750:HG2_Ill_Krunchall_18095:HG4_PB_assemblyticsfalcon_5715:HG3_PB_assemblyticsfalcon_5790:HG2_PB_assemblyticsfalcon_5797:HG2_PB_assemblyticsPBcR_5602:HG4_PB_SVrefine2Falcon1Dovetail_8100:HG4_Ill_SVrefine2DISCOVARDovetail_9477:HG4_Ill_MetaSV_1135:HG4_Ill_GATKHCSBGrefine_9174:HG3_PB_pbsv_12980:HG3_PB_SVrefine2PBcRDovetail_6273:HG3_PB_SVrefine2Falcon1Dovetail_8026:HG3_Ill_SVrefine2DISCOVARDovetail_9604:HG3_Ill_MetaSV_1165:HG2_PB_pbsv_13296:HG2_PB_SVrefine2PBcRplusDovetail_2409:HG2_PB_SVrefine2PB10Xhap12_9596:HG2_PB_SVrefine2Falcon2Bionano_6571:HG2_PB_SVrefine2Falcon1plusDovetail_2540:HG2_Ill_SpiralSDKrefine_3638:HG2_Ill_SVrefine2DISCOVARplusDovetail_2822:HG2_Ill_MetaSV_1063:HG2_Ill_GATKHCSBGrefine_8899:HG2_10X_SVrefine210Xhap12_9297:HG2_Ill_breakscan11_1902;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9297:HG2_Ill_GATKHCSBGrefine_8899:HG2_Ill_MetaSV_1063:HG2_Ill_SVrefine2DISCOVARplusDovetail_2822:HG2_Ill_SpiralSDKrefine_3638:HG2_PB_SVrefine2Falcon1plusDovetail_2540:HG2_PB_SVrefine2Falcon2Bionano_6571:HG2_PB_SVrefine2PB10Xhap12_9596:HG2_PB_SVrefine2PBcRplusDovetail_2409:HG2_PB_pbsv_13296:HG3_Ill_MetaSV_1165:HG3_Ill_SVrefine2DISCOVARDovetail_9604:HG3_PB_SVrefine2Falcon1Dovetail_8026:HG3_PB_SVrefine2PBcRDovetail_6273:HG3_PB_pbsv_12980:HG4_Ill_GATKHCSBGrefine_9174:HG4_Ill_MetaSV_1135:HG4_Ill_SVrefine2DISCOVARDovetail_9477:HG4_PB_SVrefine2Falcon1Dovetail_8100;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00425834;ClusterMaxSizeDiff=0.00425834;ClusterMaxEditDist=0.00426036;PBcalls=14;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2116;DistBack=6216;DistForward=10265;DistMin=6216;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=12:71602358-71604477;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:96:1/1:0:11:0:19:1/1:0:15:0:11:1/1:0:47:1/1:4:136:2119:.:.
chr12	72189158	HG2_Ill_SpiralSDKrefine_3643	GGAGAAATTTGGGAATGTCCCTAGCGTAATAATGCCTTCTACTGACATTTAAAGTCAGCTTAAACATCATTAGGGAAGACTATGACTGTTTCTATGACCTCTAGTCACAAATTTAACTAATTTAAGGTTAACTAATACCTCTTTCAGAGTTGGGCAAAAGAAGAAAAAAAAAGCCTTTATTTGTGATCAGTAAATTATAAATTACACAGAAGCTTCCAGCTACCTGGTATTTGCATGAAGAATTCTAAATTTTTTATATGCCATAATTTTTAGTAATGCTGTCCTTGAATTCACTTACATCTCTGCTCTGGTTTTTTGAAGCTCATTAGGATGATACCTGTCATCTCTTGGAAACACTGGAACTAGAGAACTGGAGGTGTTCACCCCCATTTTTTGCTACATTGTTGAAAACTGAGTAGAATTTTGTGTCCAAAAATCCTTAGTCTGTGATGGAATTTTTTAAAGTATATGTGAAGTTTTTTACTTCTTCAGTTTTTCAAGATAATTTTGCTGTTTTTGCTTTTTATTTATTTGCAACTAGAAATTGCATGTGCCAGTTACTTAATTTAATACATCTAATGGGAGATTCAAAGCAAACCATTAAAACTACCATATAAACTCAAATGAAATTTTATGACATTCTAATGTACATACTCGCCAAGAAATGCTACAAGGAGCCTCTCTGCAAATGCCTGATGGGGCACTCTGAGAATTAAACAGGAAATGGACAGGAAAAGAGGCAAAGCATAGAATAGCCTCTGTGGTATACACACAGACAATGTAAAATCCAAGAAATATAAGGTCCAAGGAGGAATTGGTTATTGAAGTAGAGAACCTCATCATGAGATTTGAGAATAGCTTTAGAGTTACTCTTGGGATAGTGTCTCATGGCCCTGTGAGGGAACTCTACAAATTTTATCCATTTTGCTGGGCAGTTTTAAGAGCTACTTTTTGTCTGTACTTTCCTTAATTTTCATATTATTTCTAGCTTTTACTTCATCTTATGAAAGATTAACTTAGAGGTTAGAATGCTTACATTTGCAAATAGCCTGAGGAATAAATATGTGCTTTATCAAAGTGGAACTTCTGATTTTCTGTAATATTAGGATGGACATGTGTCTGGCTTATCCTTCCTATCTAGGAAACTGGTGTCATTAGGAAATACGTTAACATAAGATCCCTGACTATAAAGTAAGACTTATTATCTTGTATAGTTTGTAGCATTTAATCTTCTATTTCAGTGATTGGTTTGGATCTACTTAATTTTAAGCTTTACTGGTCATTTGTCCCCCTCATGTTGTACCTAATAAGTGTGTAGTTTTTAAGTGAAATCATACATAATTTCAAGGAAACTGCTAGAGACAATGTTGAGTATCATCAAGAACATTTAATCAAACCTGTTGACTAAGAGCTTTA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_5611:HG4_PB_pbsv_13305:HG4_10X_allpass_2516:HG2_10X_allpass_2146:HG4_PB_SVrefine2Falcon1Dovetail_8103:HG4_Ill_SVrefine2DISCOVARDovetail_9480:HG4_Ill_MetaSV_1136:HG4_Ill_Cortex_771:HG3_PB_SVrefine2Falcon1Dovetail_8029:HG3_Ill_Cortex_813:HG2_PB_pbsv_13299:HG2_PB_SVrefine2PBcRplusDovetail_2412:HG2_PB_SVrefine2PB10Xhap12_9600:HG2_Ill_SpiralSDKrefine_3643:HG2_Ill_MetaSV_1064:HG2_Ill_GATKHCSBGrefine_8903:HG2_Ill_Cortex_1877:HG4_Ill_Krunchall_18427:HG2_Ill_Krunchall_18105:HG2_PB_HySA_24180:HG2_Ill_tnscope_1483:HG4_PB_assemblyticsfalcon_5725:HG3_PB_assemblyticsfalcon_5802;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_Cortex_1877:HG2_Ill_GATKHCSBGrefine_8903:HG2_Ill_MetaSV_1064:HG2_Ill_SpiralSDKrefine_3643:HG2_PB_SVrefine2PB10Xhap12_9600:HG2_PB_SVrefine2PBcRplusDovetail_2412:HG2_PB_pbsv_13299:HG3_Ill_Cortex_813:HG3_PB_SVrefine2Falcon1Dovetail_8029:HG4_Ill_Cortex_771:HG4_Ill_MetaSV_1136:HG4_Ill_SVrefine2DISCOVARDovetail_9480:HG4_PB_SVrefine2Falcon1Dovetail_8103;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00566171;ClusterMaxSizeDiff=0.00566171;ClusterMaxEditDist=0.00566572;PBcalls=10;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-1415;DistBack=-166;DistForward=-1415;DistMin=-1415;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=12:72189159-72190574;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=796.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:39:0|1:17:0:0:36:1|0:0:33:64:0:0/1:55:17:0/1:97:66:1420:.:.
chr12	72356508	HG3_PB_SVrefine2PBcRDovetail_6275	TTTGTTTTGTTTTGAGATAGAGTATCTGTCATCCAAGCTGAGGTGCAGTGGCACGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCTATTAGCTGGAATTACAGGCACACGCCACCATGCCTGGTTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGACCCCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAGAGTGCCGGGATTACAGATGTGAGCCACCGTGCCTGGCCTGAACACCTCTGCATTCCAGGCTCCACCCTGGGTAGCAGGGATACAAAAATGAACACAGCAACAAAAATCTCTGCCTTCAAAAACTGTATATCCTAATAGGGAGACACATTTAGCAGAGTAATATTTTGAATATTTTACTTTTTGCTTTTTTGCCCCGGGCATTACTGATAATATTTTATCATAAATTTATTGAGTGTCCTTTATGGTCTGAATCCTGAAGTCTAATTTTATCAAACGCAGGACTCCCAGACTTTTCTTATGAATTCTTGGAAGTCAGTAAATAAAAATTACATTTGCTTTACGGTTAAACCTTAATTAGAATTCATCATCAACTCCATTTACTGTGTGTATATATATAATATATATATAGCTATATATATTATATATGTACTAATACTATGTATTAGTGTGTGTATATACATACATATATATATATATGTATGTATATACACACATATATGTACTGCCCAAGAGGCCACATGTTTTCGTTTTTAAAAAATCTGCTTAGTGGCTGGATACTTTGGCTCACACCTGTAATCCCAGCTCTTTGGGAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCAATATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCACGCGCCTATAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATTGCTTGAACCTGGGAGGCAGAAGTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGTGACAGAGTCAGATTCTGTCTCAAAAAAAAAAAAAAAAAAAATCTGCTTAGCAACTTCCATTTGACATAGGTGGTATGACACACAGGTTGAAAACAAGACCAATCGAATTAAGTGACTTGGGTTTTTAAAAAATTATTCTTCTCTTTACAGAAGTCTCAGCATATTTGAAATGCTGAGACTTCTTGTTGAAACCCAGCAAGCCTGAAAAGCAAAAAGGAGAAACCATTTCAGAGAAATTAAAGCATCAACAACTGGTGTTTATGCAGGAGTCACAAAGTACCCAAACAGCCACATATATCTCAGTTTCATTCAAAACCTGAGAAAGCAAATCAATGGAAGATAATGGAATGGGATTTAAAAAAATGTATATATATATGCACATACATACTGATAATATTCTGGGCATATATATACACTTATATATATTAGTATATATATGCTTATTATATATTATATATTAGTATATATAGCATTCTGGCAATATTCAGAAAAAATATATATATAG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9300:HG4_Ill_Krunchall_18429:HG3_10X_allpass_2602:HG4_PB_assemblyticsfalcon_5728:HG3_PB_assemblyticsfalcon_5805:HG2_PB_assemblyticsfalcon_5810:HG2_PB_assemblyticsPBcR_5615:HG2_10X_allpass_2147:HG3_PB_pbsv_12983:HG2_PB_pbsv_13300:HG4_Ill_MetaSV_1137:HG4_Ill_GATKHCSBGrefine_9179:HG4_10X_allpass_2517:HG3_Ill_MetaSV_1167:HG3_Ill_GATKHCSBGrefine_8779:HG2_Ill_MetaSV_1065:HG2_Ill_GATKHCSBGrefine_8904:HG4_PB_pbsv_13306:HG4_PB_SVrefine2Falcon1Dovetail_8104:HG4_Ill_SVrefine2DISCOVARDovetail_9481:HG3_PB_SVrefine2PBcRDovetail_6275:HG3_PB_SVrefine2Falcon1Dovetail_8030:HG3_Ill_SVrefine2DISCOVARDovetail_9606:HG2_PB_SVrefine2PBcRplusDovetail_2413:HG2_PB_SVrefine2PB10Xhap12_9602:HG2_PB_SVrefine2Falcon2Bionano_6574:HG2_PB_SVrefine2Falcon1plusDovetail_2543:HG2_Ill_SVrefine2DISCOVARplusDovetail_2826;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9300:HG4_PB_SVrefine2Falcon1Dovetail_8104:HG4_Ill_SVrefine2DISCOVARDovetail_9481:HG3_PB_SVrefine2PBcRDovetail_6275:HG3_PB_SVrefine2Falcon1Dovetail_8030:HG3_Ill_SVrefine2DISCOVARDovetail_9606:HG2_PB_SVrefine2PBcRplusDovetail_2413:HG2_PB_SVrefine2PB10Xhap12_9602:HG2_PB_SVrefine2Falcon2Bionano_6574:HG2_PB_SVrefine2Falcon1plusDovetail_2543:HG2_Ill_SVrefine2DISCOVARplusDovetail_2826;NumExactMatchSVs=11;ClusterMaxShiftDist=0.234021;ClusterMaxSizeDiff=0.234021;ClusterMaxEditDist=0.234021;PBcalls=14;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1564;DistBack=6222;DistForward=17722;DistMin=6222;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=174;REFWIDENED=12:72356509-72358246;PctSeqSimilarity=0.9493;PctSizeSimilarity=1;PctRecOverlap=0.9565;SizeDiff=0;StartDistance=-68;EndDistance=-68;GTMatch=0;TruScore=96;MatchId=797.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:1:48:1/1:1:31:0:11:./.:6:12:12:11:0/1:13:24:0/1:10:85:1581:.:.
chr12	72977690	HG4_Ill_svaba_16605	AAAGGATGACAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTAC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1066:HG4_Ill_Krunchall_18432:HG3_Ill_Krunchall_17769:HG2_Ill_Krunchall_18110:HG4_PB_HySA_19369:HG2_PB_HySA_24184:HG4_Ill_SVrefine2DISCOVARDovetail_9482:HG3_Ill_SVrefine2DISCOVARDovetail_9608:HG2_PB_SVrefine2PBcRplusDovetail_2414:HG2_PB_SVrefine2PB10Xhap12_9604:HG2_PB_SVrefine2Falcon2Bionano_6575:HG2_PB_SVrefine2Falcon1plusDovetail_2544:HG2_Ill_manta_3686:HG2_Ill_SVrefine2DISCOVARplusDovetail_2827:HG2_10X_SVrefine210Xhap12_9301:HG2_PB_assemblyticsfalcon_5813:HG2_PB_assemblyticsPBcR_5618:HG2_Ill_SpiralSDKrefine_3648:HG4_Ill_Spiral_1047:HG3_Ill_Spiral_13847:HG2_Ill_Spiral_896:HG4_PB_pbsv_13307:HG2_PB_pbsv_13301:HG3_PB_pbsv_12986:HG4_Ill_svaba_16605:HG4_Ill_scalpel_12236:HG4_Ill_MetaSV_1138:HG4_10X_allpass_2518:HG3_Ill_svaba_16702:HG3_Ill_scalpel_12784:HG3_Ill_MetaSV_1168:HG3_10X_allpass_2604:HG2_Ill_svaba_16557:HG2_Ill_scalpel_12545;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_MetaSV_1066:HG4_Ill_svaba_16605:HG4_Ill_scalpel_12236:HG4_Ill_MetaSV_1138:HG4_10X_allpass_2518:HG3_Ill_svaba_16702:HG3_Ill_scalpel_12784:HG3_Ill_MetaSV_1168:HG3_10X_allpass_2604:HG2_Ill_svaba_16557:HG2_Ill_scalpel_12545;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0122699;ClusterMaxSizeDiff=0.0122699;ClusterMaxEditDist=0.0123457;PBcalls=11;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-162;DistBack=-163;DistForward=-156;DistMin=-163;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:72977691-72977868;PctSeqSimilarity=0.9912;PctSizeSimilarity=0.9938;PctRecOverlap=0.9571;SizeDiff=1;StartDistance=-7;EndDistance=-6;GTMatch=0;TruScore=98;MatchId=798.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:0|1:31:0:2:34:0|1:42:0:0:24:0/1:21:24:./.:.:.:.:.:.
chr12	74571808	HG2_Ill_SpiralSDKrefine_3664	TAGAGGAGTTGTGGAAGACTGTATTAGGCAAAATGGGGTGGCAAAATTGAGTGGAGGAGATCAAGTTTGAGATGTCTGTTAACTATCCAAATGGATTTGGTAGGTAGGTGTATTAGTCCATTCTCATGCTGCTATAGGACATACCCAAGACTGGGTATTTATAAAGGAAAGAGGATTAACTGATAACACAGTTCTGCAGGGCTGGGAAGGCCTC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_13311:HG3_PB_assemblyticsfalcon_5825:HG2_PB_SVrefine2PB10Xhap12_9610:HG3_PB_SVrefine2Falcon1Dovetail_8035:HG2_PB_HySA_24204:HG2_PB_PB10Xdip_7668:HG4_PB_assemblyticsfalcon_5745:HG2_PB_PB10Xdip_7667:HG2_PB_SVrefine2PB10Xhap12_9609:HG2_Ill_Krunchall_18130:HG4_PB_SVrefine2Falcon1Dovetail_8109:HG4_Ill_svaba_16622:HG4_Ill_scalpel_12247:HG4_Ill_manta_3128:HG4_Ill_MetaSV_1142:HG4_Ill_GATKHCSBGrefine_9187:HG4_10X_allpass_2519:HG2_PB_pbsv_13305:HG2_PB_SVrefine2Falcon2Bionano_6580:HG2_Ill_svaba_16573:HG2_Ill_breakscan11_1903:HG2_Ill_SpiralSDKrefine_3664:HG2_Ill_SVrefine2DISCOVARplusDovetail_2836:HG2_Ill_MetaSV_1068:HG2_Ill_GATKHCSBGrefine_8909:HG2_10X_allpass_2148:HG2_10X_SVrefine210Xhap12_9307;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9307:HG2_10X_allpass_2148:HG2_Ill_GATKHCSBGrefine_8909:HG2_Ill_MetaSV_1068:HG2_Ill_SVrefine2DISCOVARplusDovetail_2836:HG2_Ill_SpiralSDKrefine_3664:HG2_Ill_breakscan11_1903:HG2_Ill_svaba_16573:HG2_PB_SVrefine2Falcon2Bionano_6580:HG2_PB_pbsv_13305:HG4_10X_allpass_2519:HG4_Ill_GATKHCSBGrefine_9187:HG4_Ill_MetaSV_1142:HG4_Ill_manta_3128:HG4_Ill_scalpel_12247:HG4_Ill_svaba_16622:HG4_PB_SVrefine2Falcon1Dovetail_8109;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0140187;ClusterMaxSizeDiff=0.0140187;ClusterMaxEditDist=0.02331;PBcalls=12;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-213;DistBack=-54;DistForward=-208;DistMin=-208;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:74571809-74572023;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=799.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:21:0|1:35:1:1:18:1|0:0:38:52:1:0/1:33:23:./.:.:.:.:.:.
chr12	77287410	HG2_Ill_150bpfermikitraw_16772	GGTCTCAAACTCCTGACCTCATGTGATCTGCCCACCTCGGCCTCCCAAAGTACTGGGATTACAGGCTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9320:HG4_PB_pbsv_13323:HG2_PB_HySA_24226:HG2_PB_pbsv_13316:HG4_Ill_svaba_16641:HG4_Ill_scalpel_12264:HG4_Ill_manta_3131:HG4_Ill_Krunchall_18470:HG4_Ill_GATKHC_21316:HG4_Ill_GATKHCSBGrefine_9195:HG4_Ill_250bpfermikitraw_17619:HG4_Ill_150bpfermikitraw_16961:HG2_Ill_svaba_16592:HG2_Ill_GATKHC_21329:HG2_Ill_GATKHCSBGrefine_8917:HG2_Ill_250bpfermikitraw_17814:HG2_Ill_150bpfermikitraw_16772:HG2_PB_SVrefine2PBcRplusDovetail_2425:HG2_PB_SVrefine2PB10Xhap12_9615:HG2_PB_SVrefine2Falcon1plusDovetail_2556;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16772:HG2_Ill_250bpfermikitraw_17814:HG2_Ill_GATKHCSBGrefine_8917:HG2_Ill_GATKHC_21329:HG2_Ill_svaba_16592:HG4_Ill_150bpfermikitraw_16961:HG4_Ill_250bpfermikitraw_17619:HG4_Ill_GATKHCSBGrefine_9195:HG4_Ill_GATKHC_21316:HG4_Ill_Krunchall_18470:HG4_Ill_manta_3131:HG4_Ill_scalpel_12264:HG4_Ill_svaba_16641;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0149254;ClusterMaxSizeDiff=0.0148148;ClusterMaxEditDist=0.0298507;PBcalls=6;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-67;DistBack=119334;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=12:77287404-77287545;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=800.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:./.:14:25:12:2:1|0:0:17:38:0:0/1:27:19:./.:.:.:.:.:.
chr12	78536457	HG4_Ill_GATKHC_21330	ATATGTGTATATATATACATATGTATGTGTATATATATACATATATATGTGTGTGTGTGTG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_13321:HG4_PB_pbsv_13330:HG2_PB_HySA_24239:HG4_Ill_GATKHC_21331:HG4_Ill_GATKHCSBGrefine_9203:HG2_Ill_GATKHC_21339:HG2_Ill_GATKHCSBGrefine_8924:HG4_PB_HySA_19428:HG4_Ill_svaba_16653:HG4_Ill_scalpel_12271:HG4_Ill_GATKHC_21330:HG4_Ill_GATKHCSBGrefine_9202:HG4_Ill_250bpfermikitraw_17631:HG4_Ill_150bpfermikitraw_16970:HG3_Ill_GATKHC_21212:HG3_Ill_GATKHCSBGrefine_8808:HG2_Ill_svaba_16604:HG2_Ill_scalpel_12576:HG2_Ill_manta_3693:HG2_Ill_Krunchall_18162:HG2_Ill_GATKHC_21338:HG2_Ill_GATKHCSBGrefine_8923:HG2_Ill_250bpfermikitraw_17823:HG2_Ill_150bpfermikitraw_16781:HG4_Ill_svaba_16652:HG4_Ill_scalpel_12270:HG4_Ill_Krunchall_18481:HG4_Ill_250bpfermikitraw_17630:HG4_Ill_150bpfermikitraw_16969:HG4_10X_allpass_2523:HG3_Ill_svaba_16747:HG3_Ill_Krunchall_17813:HG3_Ill_250bpfermikitraw_17322:HG3_Ill_150bpfermikitraw_16828:HG2_Ill_svaba_16603:HG2_Ill_Krunchall_18161:HG2_Ill_250bpfermikitraw_17822:HG2_Ill_150bpfermikitraw_16780:HG4_Ill_manta_3134:HG4_Ill_Spiral_1053:HG3_Ill_Spiral_13885:HG3_PB_pbsv_13010;NumClusterSVs=42;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16781:HG2_Ill_250bpfermikitraw_17823:HG2_Ill_GATKHCSBGrefine_8923:HG2_Ill_GATKHC_21338:HG2_Ill_Krunchall_18162:HG2_Ill_manta_3693:HG2_Ill_scalpel_12576:HG2_Ill_svaba_16604:HG3_Ill_GATKHCSBGrefine_8808:HG3_Ill_GATKHC_21212:HG4_Ill_150bpfermikitraw_16970:HG4_Ill_250bpfermikitraw_17631:HG4_Ill_GATKHCSBGrefine_9202:HG4_Ill_GATKHC_21330:HG4_Ill_scalpel_12271:HG4_Ill_svaba_16653;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0806452;ClusterMaxSizeDiff=0.0793651;ClusterMaxEditDist=0.283333;PBcalls=5;Illcalls=36;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=18;NumTechs=3;NumTechsExact=1;SVLEN=-60;DistBack=-29;DistForward=-48;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:78536458-78536533;PctSeqSimilarity=0.9839;PctSizeSimilarity=0.9677;PctRecOverlap=0.9683;SizeDiff=-2;StartDistance=2;EndDistance=0;GTMatch=0;TruScore=97;MatchId=801.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:0:16:1:20:1/1:0:12:0:20:1/1:0:40:./.:.:.:.:.:.
chr12	80614359	HG2_Ill_SpiralSDKrefine_3697	AAAATAGTACTGAGACTTCTTCGAGGGCAAGGGCTTTTTTTTTTTTTTTTAAATCTTTTATCCACAGTGTCTAAGATAGGATTCTATGTCAATAATAATCAATAAATATTCATTTGTTTAATCGATGTTTACTGGCATCTAGATCCCAGGCTAGGCATTGGGGATGCAACGGTGAAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_13331:HG3_PB_pbsv_13024:HG3_Ill_Krunchall_17837:HG2_Ill_Krunchall_18180:HG3_Ill_svaba_16767:HG3_Ill_GATKHCSBGrefine_8819:HG3_10X_allpass_2614:HG2_Ill_svaba_16624:HG2_Ill_manta_3700:HG2_Ill_SpiralSDKrefine_3697:HG2_Ill_MetaSV_1074:HG2_Ill_GATKHCSBGrefine_8932:HG2_10X_allpass_2152:HG2_10X_SVrefine210Xhap12_9329:HG3_Ill_Spiral_13904:HG3_Ill_MetaSV_1183:HG2_Ill_Spiral_900;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9329:HG2_10X_allpass_2152:HG2_Ill_GATKHCSBGrefine_8932:HG2_Ill_MetaSV_1074:HG2_Ill_SpiralSDKrefine_3697:HG2_Ill_manta_3700:HG2_Ill_svaba_16624:HG3_10X_allpass_2614:HG3_Ill_GATKHCSBGrefine_8819:HG3_Ill_svaba_16767;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0112994;ClusterMaxSizeDiff=0.0112994;ClusterMaxEditDist=0.0170455;PBcalls=2;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-176;DistBack=1807;DistForward=-175;DistMin=-175;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:80614360-80614537;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:20:./.:17:19:24:3:0|1:38:0:1:33:0/1:29:17:./.:.:.:.:.:.
chr12	82759483	HG4_PB_pbsv_13355	AGCTAAAATATTTTATGAAACAGAAATAGATCAAAACAACAGAAGCAACTTAAGCAGCTTACTTAGCTTGCTGAAAATTTTAAGAATATCTGGCCTCGGCCGGGCGCGGTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9332:HG2_Ill_Krunchall_18197:HG2_PB_HySA_24291:HG2_Ill_MetaSV_1075:HG4_PB_pbsv_13355:HG4_Ill_svaba_16694:HG4_Ill_scalpel_12299:HG4_Ill_manta_3140:HG4_Ill_GATKHC_21372:HG4_Ill_GATKHCSBGrefine_9217:HG4_CG_vcfBeta_8481:HG4_10X_allpass_2527:HG2_PB_pbsv_13336:HG2_PB_SVrefine2PB10Xhap12_9630:HG2_PB_SVrefine2Falcon2Bionano_6603:HG2_Ill_svaba_16644:HG2_Ill_scalpel_12597:HG2_Ill_manta_3703:HG2_Ill_SpiralSDKrefine_3707:HG2_Ill_GATKHC_21377:HG2_Ill_GATKHCSBGrefine_8934:HG2_CG_vcfBeta_7559:HG2_10X_allpass_2153;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9332:HG4_PB_pbsv_13355:HG4_Ill_svaba_16694:HG4_Ill_scalpel_12299:HG4_Ill_manta_3140:HG4_Ill_GATKHC_21372:HG4_Ill_GATKHCSBGrefine_9217:HG4_CG_vcfBeta_8481:HG4_10X_allpass_2527:HG2_PB_pbsv_13336:HG2_PB_SVrefine2PB10Xhap12_9630:HG2_PB_SVrefine2Falcon2Bionano_6603:HG2_Ill_svaba_16644:HG2_Ill_scalpel_12597:HG2_Ill_manta_3703:HG2_Ill_SpiralSDKrefine_3707:HG2_Ill_GATKHC_21377:HG2_Ill_GATKHCSBGrefine_8934:HG2_CG_vcfBeta_7559:HG2_10X_allpass_2153;NumExactMatchSVs=20;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.018018;PBcalls=5;Illcalls=13;TenXcalls=3;CGcalls=2;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=2;HG2count=15;HG3count=0;HG4count=8;NumTechs=4;NumTechsExact=4;SVLEN=-110;DistBack=1439;DistForward=-110;DistMin=-110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:82759484-82759596;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=803.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:1|0:3:24:30:0:1|0:0:26:43:0:0/1:32:14:./.:.:.:.:.:.
chr12	84042269	HG3_Ill_scalpel_12850	TAAAAAAAACAAATTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_13929:HG3_PB_assemblyticsfalcon_5910:HG3_PB_SVrefine2Falcon1Dovetail_8064:HG2_PB_assemblyticsfalcon_5903:HG2_PB_assemblyticsPBcR_5720:HG4_PB_assemblyticsfalcon_5827:HG4_Ill_Krunchall_18525:HG3_Ill_Krunchall_17862:HG2_PB_pbsv_13339:HG2_Ill_Krunchall_18202:HG4_Ill_Spiral_1055:HG2_Ill_Spiral_901:HG4_PB_pbsv_13361:HG4_Ill_MetaSV_1155:HG3_Ill_MetaSV_1185:HG2_Ill_tnscope_1484:HG2_Ill_MetaSV_1076:HG4_PB_SVrefine2PBcRDovetail_6667:HG4_PB_SVrefine2Falcon1Dovetail_8142:HG4_PB_HySA_19476:HG4_Ill_manta_3142:HG4_Ill_SVrefine2DISCOVARDovetail_9529:HG4_Ill_GATKHCSBGrefine_9223:HG3_PB_pbsv_13036:HG3_PB_SVrefine2PBcRDovetail_6304:HG3_Ill_scalpel_12850:HG3_Ill_manta_3028:HG3_Ill_SVrefine2DISCOVARDovetail_9657:HG3_Ill_GATKHCSBGrefine_8825:HG3_10X_allpass_2616:HG2_PB_SVrefine2PBcRplusDovetail_2438:HG2_PB_SVrefine2PB10Xhap12_9634:HG2_PB_SVrefine2Falcon2Bionano_6605:HG2_PB_SVrefine2Falcon1plusDovetail_2570:HG2_PB_HySA_24300:HG2_Ill_scalpel_12601:HG2_Ill_manta_3704:HG2_Ill_SVrefine2DISCOVARplusDovetail_2872:HG2_Ill_GATKHCSBGrefine_8936:HG2_10X_SVrefine210Xhap12_9336:HG2_Ill_breakscan11_1905;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9336:HG2_Ill_GATKHCSBGrefine_8936:HG2_Ill_SVrefine2DISCOVARplusDovetail_2872:HG2_Ill_manta_3704:HG2_Ill_scalpel_12601:HG2_PB_HySA_24300:HG2_PB_SVrefine2Falcon1plusDovetail_2570:HG2_PB_SVrefine2Falcon2Bionano_6605:HG2_PB_SVrefine2PB10Xhap12_9634:HG2_PB_SVrefine2PBcRplusDovetail_2438:HG3_10X_allpass_2616:HG3_Ill_GATKHCSBGrefine_8825:HG3_Ill_SVrefine2DISCOVARDovetail_9657:HG3_Ill_manta_3028:HG3_Ill_scalpel_12850:HG3_PB_SVrefine2PBcRDovetail_6304:HG3_PB_pbsv_13036:HG4_Ill_GATKHCSBGrefine_9223:HG4_Ill_SVrefine2DISCOVARDovetail_9529:HG4_Ill_manta_3142:HG4_PB_HySA_19476:HG4_PB_SVrefine2Falcon1Dovetail_8142:HG4_PB_SVrefine2PBcRDovetail_6667;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0944625;ClusterMaxSizeDiff=0.0944625;ClusterMaxEditDist=0.176759;PBcalls=17;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=14963;DistForward=-299;DistMin=-299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=12:84042270-84042597;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=804.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:42:./.:0:1:0:3:1/1:0:28:0:17:1/1:0:55:./.:2:12:.:.:.
chr12	84484484	HG3_Ill_GATKHCSBGrefine_8827	TAACTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_HySA_24305:HG4_10X_allpass_2531:HG4_PB_assemblyticsfalcon_5834:HG3_PB_assemblyticsfalcon_5915:HG2_PB_assemblyticsfalcon_5909:HG2_PB_assemblyticsPBcR_5728:HG4_Ill_Krunchall_18531:HG3_Ill_Krunchall_17865:HG2_Ill_Krunchall_18208:HG4_Ill_MetaSV_1156:HG3_Ill_MetaSV_1187:HG2_Ill_tnscope_1485:HG2_Ill_MetaSV_1077:HG4_PB_pbsv_13364:HG4_PB_SVrefine2PBcRDovetail_6669:HG4_PB_SVrefine2Falcon1Dovetail_8145:HG4_Ill_manta_3143:HG4_Ill_SVrefine2DISCOVARDovetail_9533:HG4_Ill_GATKHCSBGrefine_9225:HG3_PB_pbsv_13039:HG3_PB_SVrefine2PBcRDovetail_6306:HG3_PB_SVrefine2Falcon1Dovetail_8067:HG3_PB_HySA_20148:HG3_Ill_scalpel_12854:HG3_Ill_manta_3029:HG3_Ill_SVrefine2DISCOVARDovetail_9660:HG3_Ill_GATKHCSBGrefine_8827:HG3_10X_allpass_2617:HG2_PB_pbsv_13341:HG2_PB_SVrefine2PBcRplusDovetail_2440:HG2_PB_SVrefine2PB10Xhap12_9636:HG2_PB_SVrefine2Falcon2Bionano_6607:HG2_PB_SVrefine2Falcon1plusDovetail_2572:HG2_Ill_manta_3705:HG2_Ill_SVrefine2DISCOVARplusDovetail_2874:HG2_Ill_GATKHCSBGrefine_8937:HG2_10X_allpass_2154:HG2_10X_SVrefine210Xhap12_9339;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9339:HG2_10X_allpass_2154:HG2_Ill_GATKHCSBGrefine_8937:HG2_Ill_SVrefine2DISCOVARplusDovetail_2874:HG2_Ill_manta_3705:HG2_PB_SVrefine2Falcon1plusDovetail_2572:HG2_PB_SVrefine2Falcon2Bionano_6607:HG2_PB_SVrefine2PB10Xhap12_9636:HG2_PB_SVrefine2PBcRplusDovetail_2440:HG2_PB_pbsv_13341:HG3_10X_allpass_2617:HG3_Ill_GATKHCSBGrefine_8827:HG3_Ill_SVrefine2DISCOVARDovetail_9660:HG3_Ill_manta_3029:HG3_Ill_scalpel_12854:HG3_PB_HySA_20148:HG3_PB_SVrefine2Falcon1Dovetail_8067:HG3_PB_SVrefine2PBcRDovetail_6306:HG3_PB_pbsv_13039:HG4_Ill_GATKHCSBGrefine_9225:HG4_Ill_SVrefine2DISCOVARDovetail_9533:HG4_Ill_manta_3143:HG4_PB_SVrefine2Falcon1Dovetail_8145:HG4_PB_SVrefine2PBcRDovetail_6669:HG4_PB_pbsv_13364;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0758294;ClusterMaxSizeDiff=0.0758294;ClusterMaxEditDist=0.0758294;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=23966;DistForward=25167;DistMin=23966;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=12:84484485-84484809;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=805.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:55:1/1:4:26:1:22:1/1:0:30:0:27:1/1:0:46:./.:1:16:.:.:.
chr12	84593108	HG2_PB_SVrefine2Falcon1plusDovetail_2574	AGCCTCAGATTCTTCTGTAAAAACTGATAATTCTCTTCCATAATGTGTAATAAAACATTTATATGTCCTTCAGTTTGTCATTTATCAAGCAACTTTGAAACAAATAAGAAGATAGAGGAACAGGTTGTTGAAAAATTAAACATTTAACTAGTCTTTAGATTTATTTAGATAAAACTAAAAAATTGTAATTATTTACACACCAATTACTATAAAATTAAAAATTAACACGTGATTACTTTGTATCTACCTTAACAGATTTATTTCTATTTACAACACTTTTATGAAAACGATTTTAAAAAATTGATATTGGTAGGTTGGTTTTTATAGCCTCAAGGGCTGTTAATTTGACTTAAAATTTTGACATTTTTAATCTTTATTAAGGAAGATTAAATGTATTAATATCTCATTATAGAGAACTTCCAGTTGTAAATGCACCTGAAAAATTAAACTGTATTTGTTACAGGAGGTTGACTATGCCCACTAAAATTATAATTAGCTCACTATACTTGATTTTAGCTTATTTTGTAAATTATAAGTTAATTATTTCTATTTCACTTGTTGCTTTGAATGCATGAAGATTCTTTAAATCTGTATATTTCTCTCTGTAGCCTTATTTTGTTTATTTTTTGAAAAAATCAACAGAATACTTATTATATAGACATTCAAAAATTAGTAGCTAGTAGAAAACCTAATAGAAGACCTTCATAAATTTAAAATTCAATTTAAAAACTTGCTTATAATATATGAACTTCTATACTAGACAAAATTAAACAGATATTTGAAATGTGAGCAATTTAAATATCTAGGATATCTTAATAATAAAATAACTTTATTAGTTTCTTATAAAGAATATATATTCAAAATACATGAAAGTCATTTGATATTTTAATGAAGGAAAGCTCAAATACCTTTTGATAATGTATATGACAGTTTTAAAGCTGCATCAATTTGAGAATAACTGTCTCTCATTTAATGCAGCACTGAGACTCCTTTACCCATCTCCAACTTCTCACCATGGCATTCAGCAAAAGTCCATTTCCTCATCTTCTTTATCATGGTACATCAAGCTCCTGATGACTTGTCTTCTTATCTATATGGTATAGGCATGTCATACCACATGTAATTTATGAGCCAGGTGTAATGAATTAGTGTCAGTACTCAGAATATAATGTAGTATTCCATATTTCTGTATATGTGTACATATTGTCAATGCCATCTCATTTTCCTTTCCATCTGCATTTTTTTAAATAAAACTTACCCATTCTTCAACACCTGATTCTCATTAGTAGGTTCTTCCTCCTCTATTCAGCTAGAGATCTCCTCTGACTTACAATGGTTTGATTCGTAATTTTTTGACATAAAGATGGTGCAAATGCAATATGCATTCAGTACACTCCCAGGCTTGGAATGAGGTTATGTCCATATAAACCTTTATTAATTTGAAAATATTATCAGTGGAAATACACTTTCAATTTACAACATTTTCAATTCCCAATGAGTTTATCGGATTGTAACCCCAGTGTAAACCAAGGTGCATCTCTATAGATTATTCTATAATAGTATATTTCAATTATATGTACTTTATTCTGTTAGTATCACGTTTTCTGAGAACACATTTTATTTCAAATGAATTTTAGTTAAAACCTCTTTGAGATCAAATATTTCATTTTTTTATATTTGAAACCCACATTTTAAGAGGTTCAATTATTTAATAATGAATGAAAAGGAAATGACTGGAGGAGGAAAGAAATAAGTAAAATATTTTTTCAATGATGGATTACTCTTGTTTTTCTTAAACTCATTGTGCTGACCCAAAATAATCTATCCATCTCTTAAAGAATACATTTAAAACTCTCACATTCTTTCTATTACCCACTACTTATCTTTTTTAGGAATATATATTCTTTTATAACATCATTTGTAATGTAATTAAAAGTAACTTTTCTGTTACTTAAATTTCACCAAGCATAGTACAGAGTGGACATGATAAATATGGAAATAAAACAACTGATTGGTTTACTGCCTTAATGGCAATTATTTCAATGAAGACAGAGCAAAATTTGAGGCATTTATTCTCAGTAATATAATAAAAAAATTCTCTGGAAAAAGCTACAGAATGAGAGACAATTGCTTAAATAGAAAGAAGGAGGAAAGAATGCCTAAAATTCCTAGTTTCTCAAACAAAATATTCTTAATAAACAATTTGTGTAGAAACTAGGTAAGATGTTTTGTTTGTTTTTTTAAAAGTTTAAACATATCACCAGAGGATAAAATTTGAAATCATTGAGATGTTAAATAAAAACAAAATCGGTTATAATTTTTACAAAATAATTGCTTTCAGAAAAGCAATATAAACTTTTAGTGTTTTCATTTAAATTCAGCCACTACATTCAAGCACTAGCAGTTACATTATAATAGTGAGTGAGCATTCTTTTGCAAACGTCTAGCAGATACCAATATAAAAAATTTTTTTATTGAAATATAGAGCACCTGACACTCATTGAGTACTCACTATGCCCTAGGCACTACCCTGGGTTCTGGAAAAATATAAGGAATGAAATTAACAAATGTTTTCACTCTATAGAATTTTATTCTAATATGGTTGAACATAATAATTATATTATATGGTTATATATATATGTGTATATACACACATACATAGAGAGAGAGGGTTTTTTTTGTTTTTTTTTTTTGTGACAGAATCTCAGTCTGTCCCTCAGGCTGGAGTGCCATGGTGTGATCTTGGCTCACTGCAACTTCTGCCTCCTGGATTTAAGCAATTCTCCAGCCTCAGCCTGCTGAGTAGCTAGGATTACAGTGTGGGCCACCATGCCTGGCTAATTTTGTGTATTTTTATTAGAGATAAGGTTTCACCATGTTAGTCAGGCTGGTTTTGAGTGCCTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9341:HG3_10X_allpass_2618:HG2_10X_allpass_2155:HG4_10X_allpass_2532:HG3_Ill_Krunchall_17868:HG2_Ill_Krunchall_18211:HG4_PB_assemblyticsfalcon_5837:HG2_PB_assemblyticsPBcR_5732:HG2_Ill_tnscope_1486:HG4_PB_pbsv_13365:HG4_PB_SVrefine2PBcRDovetail_6671:HG4_PB_SVrefine2Falcon1Dovetail_8147:HG4_Ill_SVrefine2DISCOVARDovetail_9535:HG4_Ill_MetaSV_1157:HG3_PB_pbsv_13040:HG3_PB_SVrefine2PBcRDovetail_6308:HG3_PB_SVrefine2Falcon1Dovetail_8069:HG3_Ill_MetaSV_1188:HG2_PB_pbsv_13342:HG2_PB_SVrefine2PBcRplusDovetail_2442:HG2_PB_SVrefine2PB10Xhap12_9638:HG2_PB_SVrefine2Falcon2Bionano_6609:HG2_PB_SVrefine2Falcon1plusDovetail_2574:HG2_Ill_breakscan11_1906:HG2_Ill_SpiralSDKrefine_3720:HG2_Ill_SVrefine2DISCOVARplusDovetail_2876:HG2_Ill_MetaSV_1078;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9341:HG4_PB_pbsv_13365:HG4_PB_SVrefine2PBcRDovetail_6671:HG4_PB_SVrefine2Falcon1Dovetail_8147:HG4_Ill_SVrefine2DISCOVARDovetail_9535:HG4_Ill_MetaSV_1157:HG3_PB_pbsv_13040:HG3_PB_SVrefine2PBcRDovetail_6308:HG3_PB_SVrefine2Falcon1Dovetail_8069:HG3_Ill_MetaSV_1188:HG2_PB_pbsv_13342:HG2_PB_SVrefine2PBcRplusDovetail_2442:HG2_PB_SVrefine2PB10Xhap12_9638:HG2_PB_SVrefine2Falcon2Bionano_6609:HG2_PB_SVrefine2Falcon1plusDovetail_2574:HG2_Ill_breakscan11_1906:HG2_Ill_SpiralSDKrefine_3720:HG2_Ill_SVrefine2DISCOVARplusDovetail_2876:HG2_Ill_MetaSV_1078;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00379376;ClusterMaxSizeDiff=0.00379376;ClusterMaxEditDist=0.00379376;PBcalls=13;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2903;DistBack=38974;DistForward=-2902;DistMin=-2902;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=12:84593109-84596017;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=806.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:49:0|1:35:0:0:26:0|1:53:0:0:35:0/1:53:16:0/1:201:99:3304:.:.
chr12	85272559	HG2_Ill_MetaSV_1079	CCCATAAACCAACTGATCACCACACCCAGCTAATTCTACCACAGAAATCTCACATCTGTCCCTTTGCTTCACCTCTCAATAGCACAACACCTTTCAGTATGAAAACAGTTTCCTGCTCATCTTGCCTCCAGATTCTGTTAGCTTTCCTCTGCATCCCAGAAATCCATTTTTCACAGTTGCCAGAGCGATCTTTCTAGAAATCTGGTGCTATCACTGAACTATTAAAAATCCTCAAAGGTTCCACACTGTTTGCTAGCTAACAGCCCATCATTTTACAAGAGTCCACAGAGCCTCCAATATCATCAGTCAACTTGCATATCATCCTTCGTCTTCCACAAGCTGCACAAGTTGTATGCAAAAGTCACACAGAAATACTCAGCAGTCGTTGAGCTTTGTACATGCTGTTGTCTGTGCCTACACACAGTTCTCTGTGAACTTGCTGGTGAACTTCTCTTCAACCATCGAACCCTACTCCAAAATTTACATCCCCCGTGAAGCCTTCTTGCAAATCCAGTTTAATTGCAATTGCTGACTCTACACTATCACACACTTTCTTTTTTTTTGGAGACCGAGTCTCACTCTGTCGCCCAGGGTGGAGTGCCGTGGTGCAATCTCGGCTCACTGCAACCACTGCTTCCCGGGTTCAAGTGATTATTTTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGCCACCATGCCCGGACAATTTTTTGTATTTTAGTAGAGACGGAGTTTCACCGTTTTGCCCAGGCTGGTCTCAAACTTGTGAGCTCAGGCAATCCACCCGCCTCGGCCTCCAAAAGTGCTGGGATTACAGGCGTGAGCCACCGCCTGGCCACTATCACACACTTTGTATGTGCTTCTGTTACTCCACTTAGTATGTTCTAATCATCATTACAATATGTTGCAATATGGTTGTACAATAATATAATACTAAAACATATTGCACATTAAGATAAAACTTATAGGAATTTAAGTTTTTCTTCTTGTACACAATTCATTCATTGAATTGTGGGTTCCATGAGGACAGACTGTGGCCTATTACTCTTTGCATAT	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_1487:HG3_Ill_Krunchall_17879:HG2_PB_assemblyticsfalcon_5918:HG2_PB_assemblyticsPBcR_5744:HG2_10X_allpass_2156:HG3_PB_SVrefine2PBcRDovetail_6311:HG3_Ill_SVrefine2DISCOVARDovetail_9663:HG3_Ill_MetaSV_1190:HG3_Ill_GATKHCSBGrefine_8834:HG3_10X_allpass_2619:HG2_PB_SVrefine2PBcRplusDovetail_2446:HG2_PB_SVrefine2PB10Xhap12_9641:HG2_PB_SVrefine2Falcon2Bionano_6612:HG2_PB_SVrefine2Falcon1plusDovetail_2578:HG2_Ill_breakscan11_1907:HG2_Ill_SpiralSDKrefine_3727:HG2_Ill_MetaSV_1079:HG2_Ill_GATKHCSBGrefine_8943:HG2_10X_SVrefine210Xhap12_9346:HG3_PB_pbsv_13045:HG2_PB_pbsv_13347;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9346:HG2_Ill_GATKHCSBGrefine_8943:HG2_Ill_MetaSV_1079:HG2_Ill_SpiralSDKrefine_3727:HG2_Ill_breakscan11_1907:HG2_PB_SVrefine2Falcon1plusDovetail_2578:HG2_PB_SVrefine2Falcon2Bionano_6612:HG2_PB_SVrefine2PB10Xhap12_9641:HG2_PB_SVrefine2PBcRplusDovetail_2446:HG3_10X_allpass_2619:HG3_Ill_GATKHCSBGrefine_8834:HG3_Ill_MetaSV_1190:HG3_Ill_SVrefine2DISCOVARDovetail_9663:HG3_PB_SVrefine2PBcRDovetail_6311;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00659134;ClusterMaxSizeDiff=0.00659134;ClusterMaxEditDist=0.00659134;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1062;DistBack=41511;DistForward=-1058;DistMin=-1058;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=12:85272560-85273625;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:25:1|0:2:18:18:3:0|1:48:0:0:20:0/1:46:9:0/1:70:34:.:.:.
chr12	86153305	HG3_Ill_svaba_16824	GGAGGGGAGGAGAGGGGAGGGGAGGGGAGGAGAGGGGAGGGGAGGGGAGGA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_13352:HG2_PB_assemblyticsPBcR_5752:HG2_PB_assemblyticsfalcon_5924:HG3_Ill_Krunchall_17889:HG4_PB_assemblyticsfalcon_5850:HG4_Ill_svaba_16728:HG4_Ill_scalpel_12321:HG4_Ill_Krunchall_18552:HG4_Ill_GATKHC_21407:HG4_Ill_GATKHCSBGrefine_9234:HG4_Ill_150bpfermikitraw_17040:HG4_10X_allpass_2533:HG3_Ill_svaba_16824:HG3_Ill_scalpel_12869:HG3_Ill_GATKHC_21301:HG3_Ill_GATKHCSBGrefine_8836:HG3_Ill_250bpfermikitraw_17403:HG3_Ill_150bpfermikitraw_16906:HG2_Ill_svaba_16679:HG2_Ill_scalpel_12618:HG2_Ill_Krunchall_18233:HG2_Ill_GATKHC_21419:HG2_Ill_GATKHCSBGrefine_8947:HG2_Ill_250bpfermikitraw_17897:HG2_Ill_150bpfermikitraw_16851:HG3_PB_pbsv_13048:HG3_PB_assemblyticsfalcon_5928:HG4_PB_pbsv_13372;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16851:HG2_Ill_250bpfermikitraw_17897:HG2_Ill_GATKHCSBGrefine_8947:HG2_Ill_GATKHC_21419:HG2_Ill_Krunchall_18233:HG2_Ill_scalpel_12618:HG2_Ill_svaba_16679:HG3_Ill_150bpfermikitraw_16906:HG3_Ill_250bpfermikitraw_17403:HG3_Ill_GATKHCSBGrefine_8836:HG3_Ill_GATKHC_21301:HG3_Ill_scalpel_12869:HG3_Ill_svaba_16824:HG4_10X_allpass_2533:HG4_Ill_150bpfermikitraw_17040:HG4_Ill_GATKHCSBGrefine_9234:HG4_Ill_GATKHC_21407:HG4_Ill_Krunchall_18552:HG4_Ill_scalpel_12321:HG4_Ill_svaba_16728:HG4_PB_assemblyticsfalcon_5850;NumExactMatchSVs=21;ClusterMaxShiftDist=0.290909;ClusterMaxSizeDiff=0.290909;ClusterMaxEditDist=0.290909;PBcalls=7;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=9864;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=126;REFWIDENED=12:86153285-86153460;PctSeqSimilarity=0.9153;PctSizeSimilarity=0.8333;PctRecOverlap=0.7705;SizeDiff=-10;StartDistance=-4;EndDistance=-14;GTMatch=0;TruScore=83;MatchId=808.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:66:1/1:1:18:1:37:./.:2:3:5:9:0/1:2:10:./.:.:.:.:.:.
chr12	86523315	HG3_10X_allpass_2620	ACACAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACACGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9350:HG3_PB_HySA_20174:HG2_PB_assemblyticsPBcR_5757:HG4_PB_assemblyticsfalcon_5853:HG3_PB_assemblyticsfalcon_5932:HG4_Ill_Krunchall_18556:HG3_Ill_Krunchall_17893:HG2_Ill_Krunchall_18237:HG4_Ill_Spiral_1056:HG3_Ill_Spiral_13958:HG4_PB_pbsv_13376:HG2_PB_HySA_24341:HG4_Ill_MetaSV_1159:HG3_Ill_MetaSV_1192:HG2_Ill_tnscope_1488:HG2_Ill_MetaSV_1080:HG2_PB_assemblyticsfalcon_5929:HG4_PB_SVrefine2Falcon1Dovetail_8154:HG4_Ill_scalpel_12323:HG4_Ill_GATKHCSBGrefine_9236:HG4_10X_allpass_2534:HG3_PB_pbsv_13052:HG3_PB_SVrefine2PBcRDovetail_6313:HG3_PB_SVrefine2Falcon1Dovetail_8077:HG3_Ill_scalpel_12871:HG3_Ill_manta_3034:HG3_Ill_SVrefine2DISCOVARDovetail_9671:HG3_Ill_GATKHCSBGrefine_8838:HG3_10X_allpass_2620:HG2_PB_pbsv_13355:HG2_PB_SVrefine2PBcRplusDovetail_2449:HG2_PB_SVrefine2PB10Xhap12_9647:HG2_PB_SVrefine2Falcon2Bionano_6617:HG2_PB_SVrefine2Falcon1plusDovetail_2581:HG2_Ill_scalpel_12620:HG2_Ill_manta_3710:HG2_Ill_breakscan11_1908:HG2_Ill_SVrefine2DISCOVARplusDovetail_2884:HG2_Ill_GATKHCSBGrefine_8949:HG2_10X_allpass_2157;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9350:HG4_PB_SVrefine2Falcon1Dovetail_8154:HG4_Ill_scalpel_12323:HG4_Ill_GATKHCSBGrefine_9236:HG4_10X_allpass_2534:HG3_PB_pbsv_13052:HG3_PB_SVrefine2PBcRDovetail_6313:HG3_PB_SVrefine2Falcon1Dovetail_8077:HG3_Ill_scalpel_12871:HG3_Ill_manta_3034:HG3_Ill_SVrefine2DISCOVARDovetail_9671:HG3_Ill_GATKHCSBGrefine_8838:HG3_10X_allpass_2620:HG2_PB_pbsv_13355:HG2_PB_SVrefine2PBcRplusDovetail_2449:HG2_PB_SVrefine2PB10Xhap12_9647:HG2_PB_SVrefine2Falcon2Bionano_6617:HG2_PB_SVrefine2Falcon1plusDovetail_2581:HG2_Ill_scalpel_12620:HG2_Ill_manta_3710:HG2_Ill_breakscan11_1908:HG2_Ill_SVrefine2DISCOVARplusDovetail_2884:HG2_Ill_GATKHCSBGrefine_8949:HG2_10X_allpass_2157;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0600316;ClusterMaxSizeDiff=0.0600316;ClusterMaxEditDist=0.0600316;PBcalls=16;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=6748;DistForward=-280;DistMin=-280;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=12:86523316-86523645;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:72:./.:0:3:0:4:1/1:0:16:0:24:1/1:0:46:./.:1:9:.:.:.
chr12	86689789	HG2_PB_SVrefine2Falcon1plusDovetail_2583	CACAGGGTGCTGACTGGTTTGTTTACAATCCCTGAGCTAGACATAAAGACTCTCCAAGGCCCCACCAGAGCAGCTAGATACAGAGTGTCAATTGGTGCACTCACAAACCTTGAGCTAAAT	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1193:HG3_PB_SVrefine2Falcon1Dovetail_8079:HG4_PB_assemblyticsfalcon_5856:HG3_PB_assemblyticsfalcon_5935:HG2_PB_assemblyticsfalcon_5933:HG2_PB_assemblyticsPBcR_5763:HG4_PB_SVrefine2Falcon1Dovetail_8156:HG3_PB_HySA_20177:HG2_PB_HySA_24346:HG3_PB_pbsv_13055:HG2_Ill_MetaSV_1081:HG4_PB_SVrefine2PBcRDovetail_6680:HG4_Ill_SVrefine2DISCOVARDovetail_9543:HG4_Ill_250bpfermikitraw_17708:HG4_10X_allpass_2535:HG3_PB_SVrefine2PBcRDovetail_6316:HG3_Ill_SVrefine2DISCOVARDovetail_9674:HG3_10X_allpass_2621:HG2_PB_SVrefine2PBcRplusDovetail_2454:HG2_PB_SVrefine2PB10Xhap12_9650:HG2_PB_SVrefine2Falcon2Bionano_6620:HG2_PB_SVrefine2Falcon1plusDovetail_2583:HG2_Ill_SVrefine2DISCOVARplusDovetail_2887:HG2_Ill_250bpfermikitraw_17906:HG2_10X_SVrefine210Xhap12_9352:HG4_PB_pbsv_13378:HG2_PB_pbsv_13356;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9352:HG2_Ill_250bpfermikitraw_17906:HG2_Ill_SVrefine2DISCOVARplusDovetail_2887:HG2_PB_SVrefine2Falcon1plusDovetail_2583:HG2_PB_SVrefine2Falcon2Bionano_6620:HG2_PB_SVrefine2PB10Xhap12_9650:HG2_PB_SVrefine2PBcRplusDovetail_2454:HG3_10X_allpass_2621:HG3_Ill_SVrefine2DISCOVARDovetail_9674:HG3_PB_SVrefine2PBcRDovetail_6316:HG4_10X_allpass_2535:HG4_Ill_250bpfermikitraw_17708:HG4_Ill_SVrefine2DISCOVARDovetail_9543:HG4_PB_SVrefine2PBcRDovetail_6680;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0495868;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.147541;PBcalls=17;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-119;DistBack=-249;DistForward=240;DistMin=-249;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=336;REFWIDENED=12:86689641-86690095;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:./.:0:5:0:4:./.:0:1:0:2:1/1:1:9:./.:.:.:.:.:.
chr12	90632269	HG4_Ill_150bpfermikitraw_17076	TATTATTATTAGAATTATTAGAATTATTAGAATTATAGAATTATTAATATTAGAATAA	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_5970:HG4_PB_assemblyticsfalcon_5889:HG4_CG_vcfBeta_8512:HG3_CG_vcfBeta_7223:HG2_CG_vcfBeta_7585:HG4_Ill_GATKHC_21453:HG4_Ill_GATKHCSBGrefine_9251:HG3_Ill_GATKHC_21348:HG3_Ill_GATKHCSBGrefine_8856:HG2_Ill_GATKHC_21458:HG2_Ill_GATKHCSBGrefine_8960:HG4_Ill_manta_3152:HG4_Ill_Cortex_794:HG3_Ill_manta_3044:HG3_Ill_Cortex_843:HG2_Ill_manta_3716:HG2_Ill_Cortex_1920:HG2_Ill_SpiralSDKrefine_3759:HG4_Ill_svaba_16767:HG4_Ill_250bpfermikitraw_17742:HG4_Ill_150bpfermikitraw_17076:HG3_Ill_svaba_16865:HG3_Ill_250bpfermikitraw_17445:HG3_Ill_150bpfermikitraw_16947:HG2_Ill_svaba_16720:HG2_Ill_250bpfermikitraw_17938:HG2_Ill_150bpfermikitraw_16885:HG4_Ill_Krunchall_18596:HG3_PB_pbsv_13075:HG3_Ill_Krunchall_17930:HG3_10X_allpass_2623:HG2_Ill_Krunchall_18269:HG4_PB_pbsv_13396:HG4_Ill_scalpel_12347:HG3_Ill_scalpel_12897:HG2_PB_assemblyticsfalcon_5969;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16885:HG2_Ill_250bpfermikitraw_17938:HG2_Ill_svaba_16720:HG3_Ill_150bpfermikitraw_16947:HG3_Ill_250bpfermikitraw_17445:HG3_Ill_svaba_16865:HG4_Ill_150bpfermikitraw_17076:HG4_Ill_250bpfermikitraw_17742:HG4_Ill_svaba_16767;NumExactMatchSVs=9;ClusterMaxShiftDist=0.32;ClusterMaxSizeDiff=0.32;ClusterMaxEditDist=0.32;PBcalls=5;Illcalls=27;TenXcalls=1;CGcalls=3;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=13;HG4count=12;NumTechs=4;NumTechsExact=1;SVLEN=-57;DistBack=14667;DistForward=72382;DistMin=14667;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=12:90632268-90632327;PctSeqSimilarity=0.9825;PctSizeSimilarity=0.9649;PctRecOverlap=0.9655;SizeDiff=2;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=97;MatchId=813.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:29:0|1:37:0:3:25:0|1:33:0:0:22:0/1:33:27:./.:.:.:.:.:.
chr12	90846372	HG2_10X_allpass_2160	TAATAGTAATAAAAAATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9361:HG4_PB_HySA_19549:HG4_Ill_Krunchall_18597:HG3_Ill_Krunchall_17933:HG2_Ill_Krunchall_18270:HG4_PB_pbsv_13397:HG4_Ill_MetaSV_1163:HG2_PB_HySA_24388:HG2_Ill_tnscope_1490:HG4_Ill_svaba_16768:HG4_Ill_scalpel_12349:HG4_Ill_GATKHCSBGrefine_9252:HG4_10X_allpass_2538:HG3_PB_pbsv_13077:HG3_Ill_svaba_16866:HG3_Ill_scalpel_12899:HG3_Ill_MetaSV_1200:HG3_Ill_GATKHC_21350:HG3_Ill_GATKHCSBGrefine_8858:HG3_10X_allpass_2624:HG2_Ill_svaba_16721:HG2_Ill_scalpel_12639:HG2_Ill_manta_3717:HG2_Ill_MetaSV_1087:HG2_Ill_GATKHC_21459:HG2_Ill_GATKHCSBGrefine_8961:HG2_10X_allpass_2160:HG2_Ill_breakscan11_1909:HG2_PB_pbsv_13374:HG4_PB_SVrefine2PBcRDovetail_6691:HG4_PB_SVrefine2Falcon1Dovetail_8168:HG3_PB_SVrefine2PBcRDovetail_6327:HG3_PB_SVrefine2Falcon1Dovetail_8091:HG3_Ill_SVrefine2DISCOVARDovetail_9694:HG2_PB_SVrefine2PBcRplusDovetail_2464:HG2_PB_SVrefine2PB10Xhap12_9665:HG2_PB_SVrefine2Falcon2Bionano_6633:HG2_PB_SVrefine2Falcon1plusDovetail_2593;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_2160:HG2_Ill_GATKHCSBGrefine_8961:HG2_Ill_GATKHC_21459:HG2_Ill_MetaSV_1087:HG2_Ill_manta_3717:HG2_Ill_scalpel_12639:HG2_Ill_svaba_16721:HG3_10X_allpass_2624:HG3_Ill_GATKHCSBGrefine_8858:HG3_Ill_GATKHC_21350:HG3_Ill_MetaSV_1200:HG3_Ill_scalpel_12899:HG3_Ill_svaba_16866:HG3_PB_pbsv_13077:HG4_10X_allpass_2538:HG4_Ill_GATKHCSBGrefine_9252:HG4_Ill_scalpel_12349:HG4_Ill_svaba_16768;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0097561;ClusterMaxSizeDiff=0.0097561;ClusterMaxEditDist=0.0195122;PBcalls=13;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-204;DistBack=4265;DistForward=-189;DistMin=-189;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=28;REFWIDENED=12:90846362-90846593;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=814.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:2:26:0:16:1/1:0:22:0:28:1/1:0:57:./.:.:.:.:.:.
chr12	94358328	HG3_Ill_scalpel_12912	TAGAATTAGGAGCTGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAGTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_904:HG3_PB_assemblyticsfalcon_5993:HG2_PB_assemblyticsPBcR_5816:HG4_PB_assemblyticsfalcon_5919:HG2_PB_assemblyticsfalcon_5994:HG4_Ill_Krunchall_18625:HG3_PB_SVrefine2Falcon1Dovetail_8100:HG3_Ill_Krunchall_17962:HG2_Ill_Krunchall_18294:HG4_PB_HySA_19574:HG4_PB_pbsv_13411:HG2_PB_pbsv_13388:HG3_PB_pbsv_13090:HG2_PB_HySA_24413:HG4_Ill_MetaSV_1167:HG3_PB_HySA_20235:HG2_Ill_tnscope_1491:HG2_Ill_MetaSV_1088:HG4_PB_SVrefine2PBcRDovetail_6694:HG4_PB_SVrefine2Falcon1Dovetail_8178:HG4_Ill_svaba_16797:HG4_Ill_scalpel_12365:HG4_Ill_manta_3158:HG4_Ill_SVrefine2DISCOVARDovetail_9572:HG4_Ill_GATKHCSBGrefine_9263:HG4_10X_allpass_2540:HG3_PB_SVrefine2PBcRDovetail_6337:HG3_Ill_svaba_16893:HG3_Ill_scalpel_12912:HG3_Ill_manta_3049:HG3_Ill_SVrefine2DISCOVARDovetail_9707:HG3_Ill_MetaSV_1202:HG3_Ill_GATKHCSBGrefine_8870:HG2_PB_SVrefine2PBcRplusDovetail_2472:HG2_PB_SVrefine2PB10Xhap12_9677:HG2_PB_SVrefine2Falcon2Bionano_6641:HG2_PB_SVrefine2Falcon1plusDovetail_2600:HG2_Ill_svaba_16749:HG2_Ill_scalpel_12658:HG2_Ill_manta_3721:HG2_Ill_SVrefine2DISCOVARplusDovetail_2916:HG2_Ill_GATKHCSBGrefine_8972:HG2_10X_SVrefine210Xhap12_9372:HG2_Ill_breakscan11_1910:HG4_Ill_Spiral_1058:HG3_Ill_Spiral_14009;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9372:HG2_Ill_GATKHCSBGrefine_8972:HG2_Ill_SVrefine2DISCOVARplusDovetail_2916:HG2_Ill_manta_3721:HG2_Ill_scalpel_12658:HG2_Ill_svaba_16749:HG2_PB_SVrefine2Falcon1plusDovetail_2600:HG2_PB_SVrefine2Falcon2Bionano_6641:HG2_PB_SVrefine2PB10Xhap12_9677:HG2_PB_SVrefine2PBcRplusDovetail_2472:HG3_Ill_GATKHCSBGrefine_8870:HG3_Ill_MetaSV_1202:HG3_Ill_SVrefine2DISCOVARDovetail_9707:HG3_Ill_manta_3049:HG3_Ill_scalpel_12912:HG3_Ill_svaba_16893:HG3_PB_SVrefine2PBcRDovetail_6337:HG4_10X_allpass_2540:HG4_Ill_GATKHCSBGrefine_9263:HG4_Ill_SVrefine2DISCOVARDovetail_9572:HG4_Ill_manta_3158:HG4_Ill_scalpel_12365:HG4_Ill_svaba_16797:HG4_PB_SVrefine2Falcon1Dovetail_8178:HG4_PB_SVrefine2PBcRDovetail_6694;NumExactMatchSVs=25;ClusterMaxShiftDist=0.101307;ClusterMaxSizeDiff=0.101307;ClusterMaxEditDist=0.101307;PBcalls=18;Illcalls=26;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=64427;DistForward=1918;DistMin=1918;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:94358329-94358656;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=815.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:49:1/1:1:9:0:5:1/1:0:13:0:16:1/1:0:44:0/1:2:16:.:.:.
chr12	94669332	HG3_Ill_SVrefine2DISCOVARDovetail_9708	TAAGAAACTGCTGTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_8090:HG2_10X_allpass_2161:HG2_PB_assemblyticsPBcR_5818:HG2_PB_SVrefine2PBcRplusDovetail_2474:HG2_PB_pbsv_13389:HG2_PB_assemblyticsfalcon_5996:HG3_Ill_Krunchall_17966:HG2_Ill_Krunchall_18297:HG3_PB_pbsv_13091:HG2_PB_HySA_24414:HG2_Ill_tnscope_1492:HG3_PB_assemblyticsfalcon_5995:HG3_PB_SVrefine2Falcon1Dovetail_8101:HG3_Ill_manta_3050:HG3_Ill_SVrefine2DISCOVARDovetail_9708:HG3_Ill_GATKHCSBGrefine_8872:HG3_10X_allpass_2627:HG2_PB_SVrefine2PBcRplusDovetail_2473:HG2_PB_SVrefine2PB10Xhap12_9678:HG2_PB_SVrefine2Falcon2Bionano_6642:HG2_PB_SVrefine2Falcon1plusDovetail_2601:HG2_Ill_SVrefine2DISCOVARplusDovetail_2917:HG2_Ill_GATKHCSBGrefine_8973:HG2_10X_SVrefine210Xhap12_9375:HG2_Ill_breakscan11_1911:HG2_PB_PB10Xdip_8091;NumClusterSVs=26;ExactMatchIDs=HG2_PB_PB10Xdip_8091:HG2_10X_SVrefine210Xhap12_9375:HG2_Ill_GATKHCSBGrefine_8973:HG2_Ill_SVrefine2DISCOVARplusDovetail_2917:HG2_PB_SVrefine2Falcon1plusDovetail_2601:HG2_PB_SVrefine2Falcon2Bionano_6642:HG2_PB_SVrefine2PB10Xhap12_9678:HG2_PB_SVrefine2PBcRplusDovetail_2473:HG3_10X_allpass_2627:HG3_Ill_GATKHCSBGrefine_8872:HG3_Ill_SVrefine2DISCOVARDovetail_9708:HG3_Ill_manta_3050:HG3_PB_SVrefine2Falcon1Dovetail_8101:HG3_PB_assemblyticsfalcon_5995;NumExactMatchSVs=14;ClusterMaxShiftDist=0.115806;ClusterMaxSizeDiff=0.115806;ClusterMaxEditDist=0.115806;PBcalls=14;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-510;DistForward=-307;DistMin=-510;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:94669333-94669671;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=816.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:0|1:27:0:0:35:0|1:33:0:0:21:0/1:33:20:0/1:15:11:.:.:.
chr12	95244024	HG3_Ill_manta_3051	TGATCTTATAACTAGAAAAACCTAAAGACTCCACCAAAAAACTCTTAGATCTGATAAATAAATTCAGTAAAGCTTCAGGTACAAAATCAACACACAAAAATCGGTAGCATTTCTATACACCAATAATGAACTTGCTGAGAAAGAAATCAAGAAGGCAATCCCATTTACAATAGCTATAAAAAATAGAATATCTAACAATAAATTTAACCAAGGAGGTTGTCTTAGTCCATTTGTGTAGCTACATCTGAGGCTGGGTAATCTATAAAGAAAAGAGGTTTATTTGGCTAATGGTTCTACAGGCTGTACAAGAAGCACAGCACCAATATCTGCTACTGGAGAGGGCTTCCCGGCTGCTTCTACTCATGGCAGAAGGAGAACGGGAGCTGTTGTATGCAGAGATCATATGGTGAGAGAGAGGAAGCAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_13413:HG2_PB_pbsv_13391:HG4_Ill_Krunchall_18633:HG4_PB_assemblyticsfalcon_5923:HG3_PB_assemblyticsfalcon_5998:HG2_PB_assemblyticsfalcon_6000:HG2_PB_assemblyticsPBcR_5821:HG3_PB_HySA_20240:HG2_Ill_tnscope_1493:HG2_Ill_MetaSV_1090:HG4_PB_SVrefine2PBcRDovetail_6695:HG4_PB_SVrefine2Falcon1Dovetail_8179:HG4_Ill_manta_3159:HG4_Ill_SVrefine2DISCOVARDovetail_9575:HG4_Ill_MetaSV_1168:HG4_Ill_GATKHCSBGrefine_9265:HG4_10X_allpass_2541:HG3_PB_pbsv_13093:HG3_PB_SVrefine2PBcRDovetail_6339:HG3_PB_SVrefine2Falcon1Dovetail_8102:HG3_Ill_scalpel_12920:HG3_Ill_manta_3051:HG3_Ill_SVrefine2DISCOVARDovetail_9710:HG3_Ill_MetaSV_1204:HG3_Ill_GATKHCSBGrefine_8873:HG3_10X_allpass_2628:HG2_PB_SVrefine2PBcRplusDovetail_2475:HG2_PB_SVrefine2PB10Xhap12_9679:HG2_PB_SVrefine2Falcon2Bionano_6643:HG2_PB_SVrefine2Falcon1plusDovetail_2603:HG2_Ill_scalpel_12662:HG2_Ill_manta_3722:HG2_Ill_SpiralSDKrefine_3781:HG2_Ill_SVrefine2DISCOVARplusDovetail_2918:HG2_Ill_GATKHCSBGrefine_8974:HG2_10X_allpass_2162:HG2_10X_SVrefine210Xhap12_9377:HG2_Ill_breakscan11_1912;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9377:HG2_10X_allpass_2162:HG2_Ill_GATKHCSBGrefine_8974:HG2_Ill_SVrefine2DISCOVARplusDovetail_2918:HG2_Ill_SpiralSDKrefine_3781:HG2_Ill_manta_3722:HG2_Ill_scalpel_12662:HG2_PB_SVrefine2Falcon1plusDovetail_2603:HG2_PB_SVrefine2Falcon2Bionano_6643:HG2_PB_SVrefine2PB10Xhap12_9679:HG2_PB_SVrefine2PBcRplusDovetail_2475:HG3_10X_allpass_2628:HG3_Ill_GATKHCSBGrefine_8873:HG3_Ill_MetaSV_1204:HG3_Ill_SVrefine2DISCOVARDovetail_9710:HG3_Ill_manta_3051:HG3_Ill_scalpel_12920:HG3_PB_SVrefine2Falcon1Dovetail_8102:HG3_PB_SVrefine2PBcRDovetail_6339:HG3_PB_pbsv_13093:HG4_10X_allpass_2541:HG4_Ill_GATKHCSBGrefine_9265:HG4_Ill_MetaSV_1168:HG4_Ill_SVrefine2DISCOVARDovetail_9575:HG4_Ill_manta_3159:HG4_PB_SVrefine2Falcon1Dovetail_8179:HG4_PB_SVrefine2PBcRDovetail_6695;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0141844;ClusterMaxSizeDiff=0.0141844;ClusterMaxEditDist=0.0141844;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-423;DistBack=55206;DistForward=-422;DistMin=-422;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:95244025-95244449;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=817.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:43:1/1:0:22:1:17:1/1:0:30:0:38:1/1:0:37:0/1:3:12:.:.:.
chr12	95344056	HG4_Ill_GATKHCSBGrefine_9267	TGGCAACAATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_905:HG4_PB_assemblyticsfalcon_5924:HG3_PB_assemblyticsfalcon_6000:HG2_PB_assemblyticsfalcon_6003:HG2_PB_assemblyticsPBcR_5823:HG4_Ill_Krunchall_18634:HG3_Ill_Krunchall_17970:HG2_Ill_Krunchall_18302:HG4_Ill_Spiral_1059:HG3_Ill_Spiral_14016:HG2_PB_HySA_24419:HG4_PB_HySA_19584:HG4_Ill_MetaSV_1170:HG3_Ill_MetaSV_1206:HG2_Ill_tnscope_1494:HG2_Ill_MetaSV_1092:HG4_PB_pbsv_13415:HG4_PB_SVrefine2Falcon1Dovetail_8180:HG4_Ill_scalpel_12368:HG4_Ill_manta_3161:HG4_Ill_SVrefine2DISCOVARDovetail_9576:HG4_Ill_GATKHCSBGrefine_9267:HG4_10X_allpass_2542:HG3_PB_pbsv_13095:HG3_PB_SVrefine2PBcRDovetail_6341:HG3_PB_SVrefine2Falcon1Dovetail_8104:HG3_Ill_scalpel_12921:HG3_Ill_manta_3052:HG3_Ill_SVrefine2DISCOVARDovetail_9712:HG3_Ill_GATKHCSBGrefine_8875:HG3_10X_allpass_2629:HG2_PB_pbsv_13393:HG2_PB_SVrefine2PBcRplusDovetail_2477:HG2_PB_SVrefine2PB10Xhap12_9680:HG2_PB_SVrefine2Falcon2Bionano_6645:HG2_PB_SVrefine2Falcon1plusDovetail_2605:HG2_Ill_scalpel_12663:HG2_Ill_manta_3723:HG2_Ill_SVrefine2DISCOVARplusDovetail_2919:HG2_Ill_GATKHCSBGrefine_8976:HG2_10X_allpass_2163:HG2_10X_SVrefine210Xhap12_9379:HG2_Ill_breakscan11_1913;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9379:HG2_10X_allpass_2163:HG2_Ill_GATKHCSBGrefine_8976:HG2_Ill_SVrefine2DISCOVARplusDovetail_2919:HG2_Ill_manta_3723:HG2_Ill_scalpel_12663:HG2_PB_SVrefine2Falcon1plusDovetail_2605:HG2_PB_SVrefine2Falcon2Bionano_6645:HG2_PB_SVrefine2PB10Xhap12_9680:HG2_PB_SVrefine2PBcRplusDovetail_2477:HG2_PB_pbsv_13393:HG3_10X_allpass_2629:HG3_Ill_GATKHCSBGrefine_8875:HG3_Ill_SVrefine2DISCOVARDovetail_9712:HG3_Ill_manta_3052:HG3_Ill_scalpel_12921:HG3_PB_SVrefine2Falcon1Dovetail_8104:HG3_PB_SVrefine2PBcRDovetail_6341:HG3_PB_pbsv_13095:HG4_10X_allpass_2542:HG4_Ill_GATKHCSBGrefine_9267:HG4_Ill_SVrefine2DISCOVARDovetail_9576:HG4_Ill_manta_3161:HG4_Ill_scalpel_12368:HG4_PB_SVrefine2Falcon1Dovetail_8180:HG4_PB_pbsv_13415;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0754098;ClusterMaxSizeDiff=0.0754098;ClusterMaxEditDist=0.0754098;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=23424;DistForward=33306;DistMin=23424;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=12:95344057-95344378;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=818.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:0:18:1:21:1/1:0:22:0:22:1/1:0:73:./.:1:14:.:.:.
chr12	96010453	HG2_PB_SVrefine2PB10Xhap12_9685	TCCCGAGTAGTTGGGTCAACAGGCGTAAGCTACCAACGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGGATCTTGCCATGTTGCCCAGGCTGGTCTGGAACTCCTGAGCTCAAGTGATCCGCCCACGTTGGCCTCTAGAAGTACTGGGATTACAGGCATGAGCCACTGCACCTGGCCAGAATTCAGTTTCTTGATTTCTGGGTTTGTGTTCTGCCTCCACCATGTTAATAACCATCTGGCACTGAAAAAAGACAGCGTGTTCACCTTTTGGAACTCTGTTTCTTTCAAGTCACTAAAACGTCACTTAGAAAATGATCTCTCCCAAAACCTCAGAGGTATGAAAGAACTAGTGTTTTCAAAATGAGAGGACCATTTCTAAAGAAAAACTAAAATGAGGTTTTCTTATATTAGTTGTCCTCAATTTTAAGCTTTATCATTAAACAGAAATGATGGAAAATTACTTCCCATTAACACAACTCAGTTGAAATGTTTATATGTTTAAAATATCTGCAGAATTATACTAATGCTTAAAAGCACTGTGCCACAGAAAACTTTGGACATTAGCATTTATCTACTTGGAGTAACTCTTATCTATAGTGGAAGACAAAGCTAACACGGTATCAGTTATACTGTGTTAGTCACTGTTGTACTATTCTGTTGCTAGTACACCATAATATAGTATACCCTTCCTTTTAAAAAAAAGCCTGGGCCGGCTGTGGTGGTTCACGCCTATAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCATGAGGTCAAGAGATGGAGATCATCCTGGCCAACATGGTGAAACCCCGTCTCTATTAAAAATACAAAAATTAGCTGGAAGTGGTGGCATGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTTCAGTGAGTGGAGATCGCGTCACTACACTCCAGCCTGGCGAAAGGGCAAGACTCATCTCAAAAAAAAAAAAAAGAAAAAAAAAAGCTGGTCCAAAGGTACTGTACTATTTCAACCGATTGTTCACAGTCAGTTACAGATTGTCTTTTCCTCCTTCTCACTACTGCACTTGACTAGTCTTTTTTTGTTTGTTTGTTTTTTTGTTTTTTTGAGATGGAGGCTTGCTCTGTCACACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCCACCTCCCAGATTCAAGTGATTCTCCTGCCTCAGCCTCTCTAGTAGCTGGGATTACAGGTGCCTGCCACCATGTTCAGCTATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATATTGGCCAGGCTGGTCTCGAACTCCTGCCCGCCTTGGCCTTCCAAAGCACTGGGATTACAGGTGTGAGCCACCACATCTGGCCTTGACTAGTCTTAATAATAATAATAATAATAAAATATTTTAGGCATATAGAAAATAATATGACATCCATAGTGTAATGGTTAGCATTCTGGACTCTGGAAATAATATGACAAATAATATATACCCATTACCCAGCTTTAACAAATCTTAGCATCTTGCCATAACATGTTTCTTTCAGATCTGTTTGTTTCCTTTGAAGGAATAGCAGCACCAAAAAGTAAGATAGAGTTGAAATACCTGGTATATCTCTCCTCAGTCCTTCTCCTGTTAACCACTATCCTCAATTTGTTATTTCTCATTCCCATGCCTGGGGTATTTTACTTTGTTTGGGGGTATTTGTATGACTGTTTTATACTCTTTTTGTTGTTTTTGTTTTTGAGACAGGGTCTCACTCTGTTGCCCAGGCTGGAATGCAATGGCATGATCATAGCTCACTGTAGCCTCTACCTCTTGGGCTCAAACAATCCCGTCTCAGCCTCCCAAGTGCTGGGACTACAGGTGCACACCACCACACCCAGCTAATTTTTATATGAAGAGACAGAGTTTCACCATGTTG	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_18313:HG3_Ill_Krunchall_17983:HG2_PB_assemblyticsPBcR_5832:HG2_PB_SVrefine2PBcRplusDovetail_2482:HG4_PB_assemblyticsfalcon_5931:HG2_10X_allpass_2164:HG3_PB_assemblyticsfalcon_6008:HG3_Ill_MetaSV_1209:HG2_Ill_tnscope_1495:HG4_PB_SVrefine2Falcon1Dovetail_8183:HG3_PB_pbsv_13100:HG3_PB_SVrefine2PBcRDovetail_6344:HG3_PB_SVrefine2Falcon1Dovetail_8107:HG3_10X_allpass_2631:HG2_PB_pbsv_13398:HG2_PB_SVrefine2PB10Xhap12_9685:HG2_PB_SVrefine2Falcon2Bionano_6648:HG2_Ill_SpiralSDKrefine_3788:HG2_Ill_SVrefine2DISCOVARplusDovetail_2926:HG2_Ill_MetaSV_1095:HG2_10X_SVrefine210Xhap12_9385:HG3_Ill_Krunchall_17982;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9385:HG2_Ill_MetaSV_1095:HG2_Ill_SVrefine2DISCOVARplusDovetail_2926:HG2_Ill_SpiralSDKrefine_3788:HG2_PB_SVrefine2Falcon2Bionano_6648:HG2_PB_SVrefine2PB10Xhap12_9685:HG2_PB_pbsv_13398:HG3_10X_allpass_2631:HG3_PB_SVrefine2Falcon1Dovetail_8107:HG3_PB_SVrefine2PBcRDovetail_6344:HG3_PB_pbsv_13100:HG4_PB_SVrefine2Falcon1Dovetail_8183;NumExactMatchSVs=12;ClusterMaxShiftDist=0.172736;ClusterMaxSizeDiff=0.172736;ClusterMaxEditDist=0.211606;PBcalls=11;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1961;DistBack=13732;DistForward=-1960;DistMin=-1960;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:96010454-96012417;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=819.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:24:0|1:27:0:1:16:0|1:50:0:0:33:0/1:68:21:0/1:149:58:2006:.:.
chr12	96233581	HG3_PB_SVrefine2Falcon1Dovetail_8108	GTCCACAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTATTTTTTATTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACACAGACCCCGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCCGGCAGAAGTGCCCCTCACCTCCCAGATGGGGCGGCTGGCCGGGAGGGGGGCTGACCCCCCCACCGCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCCGGGCGGGGGGCTGTTCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCCGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCAGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCCCCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCGACCTCCCTCCTGGGCGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGTTGACCCCCCCACCTCCCTCCTGGACGGGGCGACTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGCCGGGGCGGCTGGCCGACCCCCCCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGTTGCCAGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGAGCGGCCGGGCAGAGACACTCCTCACCTCCCAGACAGGGTTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGTGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTTCTCGCTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTTCCACACTGGGCAGCCAGGCAGAGGGGCTCCTCATATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCTCTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGTAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAAACCCCATCTCCACCAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCTTTGGCTCGGCATGAGAGGGAGAGGGAGACGGGAAAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGGGAGAGGGAGACGGGAGAGCTGA	G	20	PASS	ClusterIDs=HG4_Ill_MetaSV_1173:HG2_10X_allpass_2165:HG4_10X_allpass_2543:HG4_PB_assemblyticsfalcon_5934:HG3_PB_assemblyticsfalcon_6011:HG2_PB_assemblyticsfalcon_6017:HG2_PB_assemblyticsPBcR_5836:HG3_10X_allpass_2632:HG3_PB_pbsv_13103:HG4_PB_pbsv_13419:HG4_Ill_Krunchall_18647:HG3_Ill_Krunchall_17986:HG2_Ill_Krunchall_18318:HG2_Ill_tnscope_1496:HG4_PB_SVrefine2PBcRDovetail_6700:HG4_PB_SVrefine2Falcon1Dovetail_8184:HG4_Ill_SVrefine2DISCOVARDovetail_9583:HG4_Ill_GATKHCSBGrefine_9272:HG3_PB_SVrefine2PBcRDovetail_6345:HG3_PB_SVrefine2Falcon1Dovetail_8108:HG3_Ill_SVrefine2DISCOVARDovetail_9723:HG3_Ill_MetaSV_1210:HG3_Ill_GATKHCSBGrefine_8883:HG2_PB_pbsv_13401:HG2_PB_SVrefine2PBcRplusDovetail_2483:HG2_PB_SVrefine2PB10Xhap12_9687:HG2_PB_SVrefine2Falcon2Bionano_6650:HG2_PB_SVrefine2Falcon1plusDovetail_2609:HG2_Ill_SVrefine2DISCOVARplusDovetail_2929:HG2_Ill_MetaSV_1096:HG2_Ill_GATKHCSBGrefine_8980:HG2_10X_SVrefine210Xhap12_9387:HG2_Ill_breakscan11_1914;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9387:HG2_Ill_GATKHCSBGrefine_8980:HG2_Ill_MetaSV_1096:HG2_Ill_SVrefine2DISCOVARplusDovetail_2929:HG2_PB_SVrefine2Falcon1plusDovetail_2609:HG2_PB_SVrefine2Falcon2Bionano_6650:HG2_PB_SVrefine2PB10Xhap12_9687:HG2_PB_SVrefine2PBcRplusDovetail_2483:HG2_PB_pbsv_13401:HG3_Ill_GATKHCSBGrefine_8883:HG3_Ill_MetaSV_1210:HG3_Ill_SVrefine2DISCOVARDovetail_9723:HG3_PB_SVrefine2Falcon1Dovetail_8108:HG3_PB_SVrefine2PBcRDovetail_6345:HG4_Ill_GATKHCSBGrefine_9272:HG4_Ill_SVrefine2DISCOVARDovetail_9583:HG4_PB_SVrefine2Falcon1Dovetail_8184:HG4_PB_SVrefine2PBcRDovetail_6700;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0374235;ClusterMaxSizeDiff=0.0374235;ClusterMaxEditDist=0.0374235;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2746;DistBack=26017;DistForward=29117;DistMin=26017;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=12:96233582-96236338;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=820.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:0:0:1/1:0:14:0:12:1/1:0:24:0:26:1/1:0:30:1/1:3:161:2809:.:.
chr12	97554727	HG4_Ill_GATKHCSBGrefine_9277	GGAGCTTGGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_1498:HG4_10X_allpass_2544:HG3_PB_assemblyticsfalcon_6029:HG4_PB_assemblyticsfalcon_5949:HG2_PB_assemblyticsfalcon_6038:HG2_PB_assemblyticsPBcR_5858:HG3_Ill_Krunchall_18006:HG2_Ill_Krunchall_18338:HG3_PB_HySA_20267:HG2_PB_HySA_24459:HG2_Ill_Spiral_907:HG4_PB_HySA_19613:HG2_PB_pbsv_13412:HG4_PB_pbsv_13423:HG3_PB_pbsv_13113:HG4_PB_SVrefine2PBcRDovetail_6704:HG4_PB_SVrefine2Falcon1Dovetail_8188:HG4_Ill_svaba_16828:HG4_Ill_scalpel_12382:HG4_Ill_SVrefine2DISCOVARDovetail_9587:HG4_Ill_GATKHCSBGrefine_9277:HG3_PB_SVrefine2PBcRDovetail_6350:HG3_PB_SVrefine2Falcon1Dovetail_8111:HG3_Ill_svaba_16928:HG3_Ill_scalpel_12939:HG3_Ill_SVrefine2DISCOVARDovetail_9733:HG3_Ill_GATKHCSBGrefine_8888:HG3_10X_allpass_2634:HG2_PB_SVrefine2PBcRplusDovetail_2490:HG2_PB_SVrefine2PB10Xhap12_9696:HG2_PB_SVrefine2Falcon2Bionano_6655:HG2_PB_SVrefine2Falcon1plusDovetail_2614:HG2_Ill_svaba_16784:HG2_Ill_scalpel_12685:HG2_Ill_manta_3727:HG2_Ill_breakscan11_1916:HG2_Ill_SVrefine2DISCOVARplusDovetail_2936:HG2_Ill_MetaSV_1100:HG2_Ill_GATKHCSBGrefine_8987:HG2_10X_allpass_2167:HG2_10X_SVrefine210Xhap12_9392:HG4_Ill_MetaSV_1174:HG3_Ill_MetaSV_1212;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9392:HG2_10X_allpass_2167:HG2_Ill_GATKHCSBGrefine_8987:HG2_Ill_MetaSV_1100:HG2_Ill_SVrefine2DISCOVARplusDovetail_2936:HG2_Ill_breakscan11_1916:HG2_Ill_manta_3727:HG2_Ill_scalpel_12685:HG2_Ill_svaba_16784:HG2_PB_SVrefine2Falcon1plusDovetail_2614:HG2_PB_SVrefine2Falcon2Bionano_6655:HG2_PB_SVrefine2PB10Xhap12_9696:HG2_PB_SVrefine2PBcRplusDovetail_2490:HG3_10X_allpass_2634:HG3_Ill_GATKHCSBGrefine_8888:HG3_Ill_SVrefine2DISCOVARDovetail_9733:HG3_Ill_scalpel_12939:HG3_Ill_svaba_16928:HG3_PB_SVrefine2Falcon1Dovetail_8111:HG3_PB_SVrefine2PBcRDovetail_6350:HG4_Ill_GATKHCSBGrefine_9277:HG4_Ill_SVrefine2DISCOVARDovetail_9587:HG4_Ill_scalpel_12382:HG4_Ill_svaba_16828:HG4_PB_SVrefine2Falcon1Dovetail_8188:HG4_PB_SVrefine2PBcRDovetail_6704;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0837209;ClusterMaxSizeDiff=0.0837209;ClusterMaxEditDist=0.0837209;PBcalls=18;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-329;DistForward=14885;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=12:97554728-97555069;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=821.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:1/1:0:35:1:15:1/1:0:34:0:29:1/1:0:32:0/1:3:14:.:.:.
chr12	97701799	HG2_Ill_250bpfermikitraw_18001	TTTGTTACCAGCAATTGGTCAAACCAAAGGTGGAGAACCTCAAATACCAGTGTTCTTTTGGTTGTACTA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_18340:HG4_PB_assemblyticsfalcon_5951:HG4_Ill_svaba_16829:HG4_Ill_manta_3164:HG4_Ill_Krunchall_18668:HG4_Ill_GATKHC_21530:HG4_Ill_GATKHCSBGrefine_9278:HG4_Ill_250bpfermikitraw_17811:HG4_Ill_150bpfermikitraw_17148:HG4_10X_allpass_2545:HG3_Ill_svaba_16930:HG3_Ill_scalpel_12941:HG3_Ill_manta_3054:HG3_Ill_Krunchall_18009:HG3_Ill_GATKHC_21432:HG3_Ill_GATKHCSBGrefine_8889:HG3_Ill_250bpfermikitraw_17507:HG3_Ill_150bpfermikitraw_17008:HG3_CG_vcfBeta_7253:HG3_10X_allpass_2635:HG2_Ill_svaba_16785:HG2_Ill_manta_3728:HG2_Ill_Krunchall_18341:HG2_Ill_GATKHC_21532:HG2_Ill_GATKHCSBGrefine_8988:HG2_Ill_250bpfermikitraw_18001:HG2_Ill_150bpfermikitraw_16954:HG2_10X_allpass_2168:HG3_PB_assemblyticsfalcon_6031:HG3_Ill_Spiral_14044:HG4_PB_pbsv_13424:HG2_PB_pbsv_13413:HG3_PB_pbsv_13114;NumClusterSVs=33;ExactMatchIDs=HG2_10X_allpass_2168:HG2_Ill_150bpfermikitraw_16954:HG2_Ill_250bpfermikitraw_18001:HG2_Ill_GATKHCSBGrefine_8988:HG2_Ill_GATKHC_21532:HG2_Ill_Krunchall_18341:HG2_Ill_manta_3728:HG2_Ill_svaba_16785:HG3_10X_allpass_2635:HG3_CG_vcfBeta_7253:HG3_Ill_150bpfermikitraw_17008:HG3_Ill_250bpfermikitraw_17507:HG3_Ill_GATKHCSBGrefine_8889:HG3_Ill_GATKHC_21432:HG3_Ill_Krunchall_18009:HG3_Ill_manta_3054:HG3_Ill_scalpel_12941:HG3_Ill_svaba_16930:HG4_10X_allpass_2545:HG4_Ill_150bpfermikitraw_17148:HG4_Ill_250bpfermikitraw_17811:HG4_Ill_GATKHCSBGrefine_9278:HG4_Ill_GATKHC_21530:HG4_Ill_Krunchall_18668:HG4_Ill_manta_3164:HG4_Ill_svaba_16829:HG4_PB_assemblyticsfalcon_5951;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.145985;PBcalls=5;Illcalls=24;TenXcalls=3;CGcalls=1;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=3;CGexactcalls=1;HG2count=10;HG3count=13;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-68;DistBack=58368;DistForward=48711;DistMin=48711;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=12:97701798-97701869;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=822.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:20:1|0:2:24:25:4:0|1:25:0:0:19:0/1:32:20:./.:.:.:.:.:.
chr12	98015580	HG2_Ill_150bpfermikitraw_16955	GTGTGTGTATGTGTATATATACACATATATATGTGTGTATGTGTATATATACACATATATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9396:HG2_PB_HySA_24466:HG2_PB_assemblyticsfalcon_6041:HG3_PB_HySA_20273:HG2_PB_pbsv_13416:HG4_PB_pbsv_13427:HG3_PB_pbsv_13118:HG4_PB_HySA_19616:HG4_Ill_svaba_16830:HG4_Ill_manta_3165:HG4_Ill_Krunchall_18671:HG4_Ill_GATKHC_21534:HG4_Ill_GATKHCSBGrefine_9282:HG4_Ill_250bpfermikitraw_17815:HG4_Ill_150bpfermikitraw_17151:HG3_Ill_svaba_16931:HG3_Ill_manta_3056:HG3_Ill_Krunchall_18012:HG3_Ill_GATKHC_21437:HG3_Ill_GATKHCSBGrefine_8894:HG3_Ill_250bpfermikitraw_17511:HG3_Ill_150bpfermikitraw_17010:HG2_Ill_svaba_16787:HG2_Ill_manta_3730:HG2_Ill_SpiralSDKrefine_3807:HG2_Ill_GATKHC_21536:HG2_Ill_GATKHCSBGrefine_8991:HG2_Ill_250bpfermikitraw_18005:HG2_Ill_150bpfermikitraw_16955:HG4_PB_SVrefine2PBcRDovetail_6705:HG4_Ill_SVrefine2DISCOVARDovetail_9588:HG3_PB_SVrefine2PBcRDovetail_6351:HG3_PB_SVrefine2Falcon1Dovetail_8112:HG3_Ill_SVrefine2DISCOVARDovetail_9735:HG2_PB_SVrefine2PBcRplusDovetail_2491:HG2_PB_SVrefine2PB10Xhap12_9697:HG2_PB_SVrefine2Falcon2Bionano_6657:HG2_Ill_SVrefine2DISCOVARplusDovetail_2938;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_16955:HG2_Ill_250bpfermikitraw_18005:HG2_Ill_GATKHCSBGrefine_8991:HG2_Ill_GATKHC_21536:HG2_Ill_SpiralSDKrefine_3807:HG2_Ill_manta_3730:HG2_Ill_svaba_16787:HG3_Ill_150bpfermikitraw_17010:HG3_Ill_250bpfermikitraw_17511:HG3_Ill_GATKHCSBGrefine_8894:HG3_Ill_GATKHC_21437:HG3_Ill_Krunchall_18012:HG3_Ill_manta_3056:HG3_Ill_svaba_16931:HG4_Ill_150bpfermikitraw_17151:HG4_Ill_250bpfermikitraw_17815:HG4_Ill_GATKHCSBGrefine_9282:HG4_Ill_GATKHC_21534:HG4_Ill_Krunchall_18671:HG4_Ill_manta_3165:HG4_Ill_svaba_16830;NumExactMatchSVs=21;ClusterMaxShiftDist=0.110236;ClusterMaxSizeDiff=0.110236;ClusterMaxEditDist=0.140625;PBcalls=13;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-60;DistBack=7176;DistForward=-59;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=104;REFWIDENED=12:98015562-98015725;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=823.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:45:1/1:0:8:0:10:./.:0:14:2:10:1/1:0:46:./.:.:.:.:.:.
chr12	98974051	HG3_Ill_GATKHCSBGrefine_8895	GCCAACATGGTGAAACCTCGTCTTTACTAAAATACAAAAATCTAGCCGGGCGTAGTGGCAGGTGCCTGTAATCCTAGCTACTTGGAATGCTGGGGCAAGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATTGTGCCACATTGCACTCCAGCCTGGGCGACAAGAGCAAGACTCCGTCTCAAAAGAAAAAAAAAAAAAAAGAAATTGGCCAGGCATGGTGGCTTACGCCTCTAATCTCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGA	G	20	PASS	ClusterIDs=HG3_Ill_Krunchall_18021:HG2_Ill_MetaSV_1102:HG2_PB_assemblyticsfalcon_6045:HG2_PB_SVrefine2Falcon1plusDovetail_2615:HG3_PB_pbsv_13121:HG2_Ill_MetaSV_1101:HG3_Ill_scalpel_12952:HG3_Ill_manta_3057:HG3_Ill_GATKHCSBGrefine_8895:HG3_10X_allpass_2637:HG2_Ill_scalpel_12695:HG2_Ill_GATKHCSBGrefine_8992:HG2_PB_pbsv_13418:HG2_Ill_tnscope_1499:HG3_PB_SVrefine2Falcon1Dovetail_8116:HG2_PB_SVrefine2Falcon2Bionano_6658;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_8992:HG2_Ill_scalpel_12695:HG3_10X_allpass_2637:HG3_Ill_GATKHCSBGrefine_8895:HG3_Ill_manta_3057:HG3_Ill_scalpel_12952;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0538827;ClusterMaxSizeDiff=0.0538827;ClusterMaxEditDist=0.260317;PBcalls=6;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-311;DistBack=17075;DistForward=63227;DistMin=17075;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=299;REFWIDENED=12:98973964-98974573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=824.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:23:0|1:33:1:1:22:0|1:46:0:0:18:0/1:36:12:0/1:22:5:.:.:.
chr12	103229423	HG4_Ill_SVrefine2DISCOVARDovetail_9607	ATATGCACATACATATATGTGCATACGTACATATGCATATACATATATGTGCATACGTACATATGCATATACATATATGTGCATACGTACATATGCATATACATATATGTGCATACGTACATATGCATATACATATATGTGCATACGTACA	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8124:HG4_Ill_Krunchall_18703:HG2_Ill_Krunchall_18376:HG4_Ill_GATKHC_21568:HG4_Ill_GATKHCSBGrefine_9292:HG2_Ill_GATKHC_21570:HG2_Ill_GATKHCSBGrefine_9004:HG4_PB_SVrefine2PBcRDovetail_6713:HG4_Ill_manta_3169:HG4_Ill_SVrefine2DISCOVARDovetail_9607:HG2_PB_assemblyticsPBcR_5882:HG2_PB_SVrefine2PBcRplusDovetail_2498:HG2_PB_SVrefine2PB10Xhap12_9709:HG2_PB_SVrefine2Falcon2Bionano_6668:HG2_Ill_manta_3735:HG2_10X_SVrefine210Xhap12_9414:HG2_Ill_SpiralSDKrefine_3825:HG2_Ill_MetaSV_1104:HG4_PB_HySA_19638:HG4_Ill_svaba_16859:HG4_Ill_250bpfermikitraw_17842:HG4_Ill_150bpfermikitraw_17179:HG4_10X_allpass_2547:HG2_Ill_svaba_16816:HG2_10X_allpass_2169:HG2_PB_pbsv_13428:HG4_PB_pbsv_13438:HG2_PB_HySA_24493;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9414:HG2_Ill_manta_3735:HG2_PB_SVrefine2Falcon2Bionano_6668:HG2_PB_SVrefine2PB10Xhap12_9709:HG2_PB_SVrefine2PBcRplusDovetail_2498:HG2_PB_assemblyticsPBcR_5882:HG4_Ill_SVrefine2DISCOVARDovetail_9607:HG4_Ill_manta_3169:HG4_PB_SVrefine2PBcRDovetail_6713;NumExactMatchSVs=9;ClusterMaxShiftDist=0.201835;ClusterMaxSizeDiff=0.201835;ClusterMaxEditDist=0.201835;PBcalls=10;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-150;DistBack=19;DistForward=-144;DistMin=-144;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=107;REFWIDENED=12:103229339-103229595;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=0.8477;SizeDiff=0;StartDistance=23;EndDistance=23;GTMatch=0;TruScore=94;MatchId=825.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:52:0|1:39:3:3:45:1|0:2:29:42:2:0/1:40:31:./.:.:.:.:.:.
chr12	103242185	HG3_Ill_GATKHCSBGrefine_8905	GGGACACCAGGAGACTGGAGAGGTTGAGGATAGACAGGACACCAGGAGACTGGAGAGGTGGAGGGTAGACA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_18035:HG3_PB_assemblyticsfalcon_6053:HG2_PB_pbsv_13429:HG2_PB_assemblyticsfalcon_6060:HG3_PB_pbsv_13133:HG3_Ill_GATKHC_21470:HG3_Ill_GATKHCSBGrefine_8905:HG3_Ill_250bpfermikitraw_17532:HG2_PB_assemblyticsPBcR_5883:HG2_Ill_GATKHCSBGrefine_9005;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18035:HG3_Ill_GATKHC_21470:HG3_Ill_GATKHCSBGrefine_8905:HG3_Ill_250bpfermikitraw_17532:HG2_PB_assemblyticsPBcR_5883:HG2_Ill_GATKHCSBGrefine_9005;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0142857;ClusterMaxSizeDiff=0.0141844;ClusterMaxEditDist=0.0285714;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=250;DistForward=9732;DistMin=250;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=92;REFWIDENED=12:103242184-103242348;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=826.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:23:./.:28:4:10:25:./.:16:1:0:3:0/1:8:8:./.:.:.:.:.:.
chr12	104293395	HG2_PB_SVrefine2Falcon1plusDovetail_2627	GCCCCCATTTCTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCTCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1917:HG4_Ill_Krunchall_18719:HG3_PB_assemblyticsfalcon_6064:HG4_Ill_Krunchall_18718:HG3_Ill_Krunchall_18054:HG2_Ill_Krunchall_18392:HG4_PB_assemblyticsfalcon_5987:HG4_Ill_Spiral_1063:HG3_Ill_Spiral_14076:HG3_Ill_Krunchall_18053:HG2_Ill_Spiral_909:HG3_PB_pbsv_13141:HG2_PB_pbsv_13438:HG2_PB_HySA_24507:HG4_Ill_MetaSV_1178:HG3_Ill_MetaSV_1220:HG2_Ill_tnscope_1501:HG2_Ill_MetaSV_1105:HG4_PB_pbsv_13445:HG4_PB_SVrefine2PBcRDovetail_6717:HG4_PB_SVrefine2Falcon1Dovetail_8199:HG4_Ill_SVrefine2DISCOVARDovetail_9612:HG4_Ill_GATKHCSBGrefine_9298:HG4_10X_allpass_2548:HG3_PB_SVrefine2PBcRDovetail_6364:HG3_PB_SVrefine2Falcon1Dovetail_8129:HG3_Ill_scalpel_12973:HG3_Ill_SVrefine2DISCOVARDovetail_9753:HG3_Ill_GATKHCSBGrefine_8909:HG3_10X_allpass_2640:HG2_PB_SVrefine2PBcRplusDovetail_2502:HG2_PB_SVrefine2PB10Xhap12_9713:HG2_PB_SVrefine2Falcon2Bionano_6672:HG2_PB_SVrefine2Falcon1plusDovetail_2627:HG2_Ill_scalpel_12719:HG2_Ill_manta_3740:HG2_Ill_SpiralSDKrefine_3833:HG2_Ill_SVrefine2DISCOVARplusDovetail_2960:HG2_Ill_GATKHCSBGrefine_9013:HG2_10X_allpass_2170:HG2_10X_SVrefine210Xhap12_9418:HG4_Ill_Spiral_1062;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9418:HG2_10X_allpass_2170:HG2_Ill_GATKHCSBGrefine_9013:HG2_Ill_SVrefine2DISCOVARplusDovetail_2960:HG2_Ill_SpiralSDKrefine_3833:HG2_Ill_manta_3740:HG2_Ill_scalpel_12719:HG2_PB_SVrefine2Falcon1plusDovetail_2627:HG2_PB_SVrefine2Falcon2Bionano_6672:HG2_PB_SVrefine2PB10Xhap12_9713:HG2_PB_SVrefine2PBcRplusDovetail_2502:HG3_10X_allpass_2640:HG3_Ill_GATKHCSBGrefine_8909:HG3_Ill_SVrefine2DISCOVARDovetail_9753:HG3_Ill_scalpel_12973:HG3_PB_SVrefine2Falcon1Dovetail_8129:HG3_PB_SVrefine2PBcRDovetail_6364:HG4_10X_allpass_2548:HG4_Ill_GATKHCSBGrefine_9298:HG4_Ill_SVrefine2DISCOVARDovetail_9612:HG4_PB_SVrefine2Falcon1Dovetail_8199:HG4_PB_SVrefine2PBcRDovetail_6717:HG4_PB_pbsv_13445;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.0740741;PBcalls=14;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=14584;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=12:104293396-104293735;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=827.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:1/1:0:22:1:28:1/1:0:26:0:29:1/1:0:45:0/1:3:24:.:.:.
chr12	106618690	HG2_Ill_svaba_16854	CTGAAGGCACTCACAATCAAACACAGGCCCACCTGAAGGCACTCACAATCAAACACAGGCCCACCTGAAGGCACTCACAATCAAACACAGGCCCACT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9428:HG2_PB_HySA_24553:HG4_Ill_svaba_16899:HG4_Ill_Krunchall_18752:HG4_Ill_GATKHC_21620:HG4_Ill_GATKHCSBGrefine_9307:HG4_Ill_250bpfermikitraw_17890:HG4_Ill_150bpfermikitraw_17222:HG3_Ill_svaba_16983:HG3_Ill_Krunchall_18075:HG3_Ill_GATKHC_21505:HG3_Ill_GATKHCSBGrefine_8912:HG3_Ill_250bpfermikitraw_17562:HG3_Ill_150bpfermikitraw_17066:HG2_Ill_svaba_16854:HG2_Ill_Krunchall_18420:HG2_Ill_GATKHC_21620:HG2_Ill_GATKHCSBGrefine_9022:HG2_Ill_250bpfermikitraw_18081:HG2_Ill_150bpfermikitraw_17026:HG3_PB_pbsv_13146:HG2_PB_pbsv_13451:HG4_PB_pbsv_13458:HG4_PB_SVrefine2PBcRDovetail_6723:HG4_PB_SVrefine2Falcon1Dovetail_8207:HG4_Ill_SVrefine2DISCOVARDovetail_9622:HG3_PB_SVrefine2PBcRDovetail_6367:HG3_PB_SVrefine2Falcon1Dovetail_8137:HG3_Ill_SVrefine2DISCOVARDovetail_9763:HG2_PB_SVrefine2PBcRplusDovetail_2508:HG2_PB_SVrefine2PB10Xhap12_9719:HG2_PB_SVrefine2Falcon2Bionano_6678:HG2_PB_SVrefine2Falcon1plusDovetail_2634:HG2_Ill_SVrefine2DISCOVARplusDovetail_2968;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17026:HG2_Ill_250bpfermikitraw_18081:HG2_Ill_GATKHCSBGrefine_9022:HG2_Ill_GATKHC_21620:HG2_Ill_Krunchall_18420:HG2_Ill_svaba_16854:HG3_Ill_150bpfermikitraw_17066:HG3_Ill_250bpfermikitraw_17562:HG3_Ill_GATKHCSBGrefine_8912:HG3_Ill_GATKHC_21505:HG3_Ill_Krunchall_18075:HG3_Ill_svaba_16983:HG4_Ill_150bpfermikitraw_17222:HG4_Ill_250bpfermikitraw_17890:HG4_Ill_GATKHCSBGrefine_9307:HG4_Ill_GATKHC_21620:HG4_Ill_Krunchall_18752:HG4_Ill_svaba_16899;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0206186;ClusterMaxSizeDiff=0.0206186;ClusterMaxEditDist=0.0412371;PBcalls=12;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-96;DistBack=15035;DistForward=-77;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=127;REFWIDENED=12:106618616-106618838;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=828.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:1/1:0:23:2:11:1/1:0:7:0:6:1/1:0:31:./.:.:.:.:.:.
chr12	109632315	HG3_Ill_Krunchall_18094	GCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTACATTGGCCTCCCAAAGTGCTGGGATTACAGTCATGAGCCACCCCCTGGCCTCTGCCTC	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_6116:HG3_PB_pbsv_13159:HG2_PB_pbsv_13465:HG4_PB_pbsv_13470:HG2_PB_SVrefine2PBcRplusDovetail_2516:HG2_PB_SVrefine2PB10Xhap12_9730:HG4_Ill_scalpel_12456:HG4_Ill_SVrefine2DISCOVARDovetail_9641:HG4_Ill_GATKHC_21641:HG4_Ill_250bpfermikitraw_17906:HG3_Ill_scalpel_13000:HG3_Ill_Krunchall_18094:HG3_Ill_GATKHC_21534:HG3_Ill_250bpfermikitraw_17582:HG2_Ill_scalpel_12757:HG2_Ill_GATKHC_21646:HG2_Ill_GATKHCSBGrefine_9029:HG2_Ill_250bpfermikitraw_18098:HG2_Ill_150bpfermikitraw_17044:HG2_10X_SVrefine210Xhap12_9438:HG2_PB_HySA_24576:HG2_PB_assemblyticsPBcR_5937:HG2_PB_SVrefine2Falcon1plusDovetail_2643;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9438:HG2_Ill_150bpfermikitraw_17044:HG2_Ill_250bpfermikitraw_18098:HG2_Ill_GATKHCSBGrefine_9029:HG2_Ill_GATKHC_21646:HG2_Ill_scalpel_12757:HG3_Ill_250bpfermikitraw_17582:HG3_Ill_GATKHC_21534:HG3_Ill_Krunchall_18094:HG3_Ill_scalpel_13000:HG4_Ill_250bpfermikitraw_17906:HG4_Ill_GATKHC_21641:HG4_Ill_SVrefine2DISCOVARDovetail_9641:HG4_Ill_scalpel_12456;NumExactMatchSVs=14;ClusterMaxShiftDist=0.121212;ClusterMaxSizeDiff=0.121212;ClusterMaxEditDist=0.121212;PBcalls=9;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-100;DistBack=26888;DistForward=15268;DistMin=15268;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=110;REFWIDENED=12:109632252-109632461;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=829.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:41:0|1:22:1:3:36:1|0:0:25:28:0:0/1:18:18:./.:.:.:.:.:.
chr12	109795422	HG2_PB_SVrefine2PB10Xhap12_9731	TTTTCTCATGCCATGAAATACTATTCTCTTGATTTTTTTTCTCCCAACCATTTCTCATGCCATGAAATACTATTCTCTTGATTTTTTTTCTCCCAACCA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2983:HG4_PB_assemblyticsfalcon_6034:HG4_PB_SVrefine2Falcon1Dovetail_8218:HG3_PB_assemblyticsfalcon_6112:HG3_PB_SVrefine2Falcon1Dovetail_8150:HG2_PB_SVrefine2Falcon2Bionano_6685:HG3_Ill_250bpfermikitraw_17583:HG2_PB_pbsv_13467:HG4_PB_pbsv_13472:HG3_PB_pbsv_13160:HG3_PB_SVrefine2PBcRDovetail_6374:HG3_Ill_SVrefine2DISCOVARDovetail_9774:HG2_PB_SVrefine2PBcRplusDovetail_2517:HG2_PB_SVrefine2PB10Xhap12_9731:HG2_PB_SVrefine2Falcon1plusDovetail_2644;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2983:HG3_PB_SVrefine2PBcRDovetail_6374:HG3_Ill_SVrefine2DISCOVARDovetail_9774:HG2_PB_SVrefine2PBcRplusDovetail_2517:HG2_PB_SVrefine2PB10Xhap12_9731:HG2_PB_SVrefine2Falcon1plusDovetail_2644;NumExactMatchSVs=6;ClusterMaxShiftDist=0.020202;ClusterMaxSizeDiff=0.020202;ClusterMaxEditDist=0.0408163;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-98;DistBack=-50;DistForward=-98;DistMin=-98;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=198;REFWIDENED=12:109795423-109795718;PctSeqSimilarity=0.9948;PctSizeSimilarity=1;PctRecOverlap=0.5354;SizeDiff=0;StartDistance=-46;EndDistance=-46;GTMatch=0;TruScore=84;MatchId=831.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:53:1/1:1:13:1:35:./.:2:1:4:0:0/1:6:17:./.:.:.:.:.:.
chr12	111304713	HG2_PB_SVrefine2PB10Xhap12_9738	CCCTCACCTCCGGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9738:HG2_PB_assemblyticsPBcR_5949:HG2_PB_assemblyticsfalcon_6133:HG3_PB_pbsv_13167:HG3_Ill_svaba_17016:HG2_Ill_Krunchall_18456:HG3_Ill_svaba_17015:HG3_PB_SVrefine2PBcRDovetail_6377;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9738:HG3_PB_SVrefine2PBcRDovetail_6377;NumExactMatchSVs=2;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.0990099;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=31696;DistForward=13694;DistMin=13694;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=89;REFWIDENED=12:111304714-111304852;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.98;PctRecOverlap=0.7843;SizeDiff=1;StartDistance=-11;EndDistance=-10;GTMatch=0;TruScore=91;MatchId=832.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:21:0|1:16:2:4:18:./.:9:0:3:2:0/0:37:2:./.:.:.:.:.:.
chr12	113071989	HG3_PB_SVrefine2Falcon1Dovetail_8160	AAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAACAAAAAAAAAACAAAACAAAAAAACAAACAAACAAACAAAC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1113:HG4_PB_pbsv_13489:HG3_PB_pbsv_13176:HG2_PB_pbsv_13487:HG4_PB_HySA_19710:HG2_PB_HySA_24601:HG4_PB_SVrefine2PBcRDovetail_6736:HG4_PB_SVrefine2Falcon1Dovetail_8228:HG4_Ill_manta_3178:HG4_Ill_SVrefine2DISCOVARDovetail_9656:HG4_Ill_GATKHC_21659:HG4_Ill_GATKHCSBGrefine_9324:HG4_10X_allpass_2555:HG3_PB_SVrefine2PBcRDovetail_6383:HG3_PB_SVrefine2Falcon1Dovetail_8160:HG3_Ill_manta_3072:HG3_Ill_SVrefine2DISCOVARDovetail_9790:HG3_Ill_GATKHCSBGrefine_8927:HG3_10X_allpass_2644:HG2_PB_SVrefine2PBcRplusDovetail_2525:HG2_PB_SVrefine2PB10Xhap12_9745:HG2_PB_SVrefine2Falcon2Bionano_6695:HG2_PB_SVrefine2Falcon1plusDovetail_2654:HG2_Ill_manta_3748:HG2_Ill_SVrefine2DISCOVARplusDovetail_2996:HG2_Ill_GATKHCSBGrefine_9042:HG2_10X_SVrefine210Xhap12_9451:HG4_Ill_MetaSV_1187:HG3_PB_HySA_20374:HG3_Ill_MetaSV_1230;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9451:HG2_Ill_GATKHCSBGrefine_9042:HG2_Ill_SVrefine2DISCOVARplusDovetail_2996:HG2_Ill_manta_3748:HG2_PB_SVrefine2Falcon1plusDovetail_2654:HG2_PB_SVrefine2Falcon2Bionano_6695:HG2_PB_SVrefine2PB10Xhap12_9745:HG2_PB_SVrefine2PBcRplusDovetail_2525:HG3_10X_allpass_2644:HG3_Ill_GATKHCSBGrefine_8927:HG3_Ill_SVrefine2DISCOVARDovetail_9790:HG3_Ill_manta_3072:HG3_PB_SVrefine2Falcon1Dovetail_8160:HG3_PB_SVrefine2PBcRDovetail_6383:HG4_10X_allpass_2555:HG4_Ill_GATKHCSBGrefine_9324:HG4_Ill_GATKHC_21659:HG4_Ill_SVrefine2DISCOVARDovetail_9656:HG4_Ill_manta_3178:HG4_PB_SVrefine2Falcon1Dovetail_8228:HG4_PB_SVrefine2PBcRDovetail_6736;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00956938;ClusterMaxSizeDiff=0.00956938;ClusterMaxEditDist=0.00956938;PBcalls=14;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-208;DistBack=3305;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=156;REFWIDENED=12:113071990-113072353;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=833.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:69:./.:3:2:1:7:./.:0:19:0:1:1/1:0:37:./.:.:.:.:.:.
chr12	113737874	HG2_Ill_GATKHCSBGrefine_9046	GCAGCCTCAACAACAATGCAGCCTCAGCAACAATGCAGCCTCAGCAACAATGCAGCCTCAACAACAATC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_13494:HG4_Ill_svaba_16932:HG2_PB_HySA_24609:HG2_Ill_breakscan11_1923:HG2_PB_SVrefine2PB10Xhap12_9751:HG4_Ill_manta_3182:HG4_Ill_Krunchall_18791:HG4_Ill_GATKHC_21669:HG4_Ill_GATKHCSBGrefine_9327:HG4_Ill_250bpfermikitraw_17930:HG4_Ill_150bpfermikitraw_17261:HG2_Ill_svaba_16894:HG2_Ill_SpiralSDKrefine_3875:HG2_Ill_Krunchall_18468:HG2_Ill_GATKHC_21681:HG2_Ill_GATKHCSBGrefine_9046:HG2_Ill_250bpfermikitraw_18126:HG2_PB_pbsv_13492:HG4_Ill_SVrefine2DISCOVARDovetail_9663:HG2_PB_SVrefine2PBcRplusDovetail_2529:HG2_PB_SVrefine2Falcon2Bionano_6700:HG2_10X_SVrefine210Xhap12_9458;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18126:HG2_Ill_GATKHCSBGrefine_9046:HG2_Ill_GATKHC_21681:HG2_Ill_Krunchall_18468:HG2_Ill_SpiralSDKrefine_3875:HG2_Ill_svaba_16894:HG4_Ill_150bpfermikitraw_17261:HG4_Ill_250bpfermikitraw_17930:HG4_Ill_GATKHCSBGrefine_9327:HG4_Ill_GATKHC_21669:HG4_Ill_Krunchall_18791:HG4_Ill_manta_3182:HG4_Ill_svaba_16932;NumExactMatchSVs=13;ClusterMaxShiftDist=0.280992;ClusterMaxSizeDiff=0.280992;ClusterMaxEditDist=0.297521;PBcalls=6;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-68;DistBack=-90;DistForward=-26;DistMin=-90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=78;REFWIDENED=12:113737850-113737995;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=834.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:25:0|1:27:1:0:19:1|0:0:19:31:0:0/1:40:17:./.:.:.:.:.:.
chr12	114102974	HG4_Ill_250bpfermikitraw_17941	AAGGGCCTACCTCACCCCTATACACACACAGGGCCTACCTCACCCCCTATACACACAC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_13498:HG2_PB_pbsv_13496:HG4_Ill_svaba_16943:HG4_Ill_GATKHC_21683:HG4_Ill_GATKHCSBGrefine_9331:HG4_Ill_250bpfermikitraw_17941:HG2_Ill_svaba_16904:HG2_Ill_SpiralSDKrefine_3882:HG2_Ill_GATKHC_21692:HG2_Ill_GATKHCSBGrefine_9049:HG2_Ill_250bpfermikitraw_18135:HG2_Ill_150bpfermikitraw_17082;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17082:HG2_Ill_250bpfermikitraw_18135:HG2_Ill_GATKHCSBGrefine_9049:HG2_Ill_GATKHC_21692:HG2_Ill_SpiralSDKrefine_3882:HG2_Ill_svaba_16904:HG4_Ill_250bpfermikitraw_17941:HG4_Ill_GATKHCSBGrefine_9331:HG4_Ill_GATKHC_21683:HG4_Ill_svaba_16943;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0353982;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0707965;PBcalls=2;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-57;DistBack=22429;DistForward=7109;DistMin=7109;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=213;REFWIDENED=12:114102869-114103138;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=835.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:28:0|1:43:8:3:21:1|0:0:12:39:2:0/1:10:5:./.:.:.:.:.:.
chr12	114728332	HG3_Ill_Krunchall_18138	TTGCACCCAGCAGAAAGGTAAATTCTTTCTTGCAGGGAGCTCCAAGTGGTACACTCCCATGGCTGCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_13504:HG3_PB_HySA_20397:HG2_PB_HySA_24633:HG4_PB_assemblyticsfalcon_6068:HG4_Ill_svaba_16952:HG4_Ill_scalpel_12484:HG4_Ill_manta_3185:HG4_Ill_Krunchall_18807:HG4_Ill_GATKHC_21691:HG4_Ill_GATKHCSBGrefine_9338:HG4_Ill_Cortex_826:HG4_Ill_250bpfermikitraw_17947:HG4_Ill_150bpfermikitraw_17278:HG4_10X_allpass_2557:HG3_PB_assemblyticsfalcon_6148:HG3_Ill_svaba_17039:HG3_Ill_scalpel_13027:HG3_Ill_manta_3076:HG3_Ill_Krunchall_18138:HG3_Ill_GATKHC_21583:HG3_Ill_GATKHCSBGrefine_8936:HG3_Ill_Cortex_871:HG3_Ill_250bpfermikitraw_17625:HG3_Ill_150bpfermikitraw_17129:HG3_10X_allpass_2645:HG2_PB_assemblyticsPBcR_5979:HG2_Ill_svaba_16912:HG2_Ill_scalpel_12789:HG2_Ill_manta_3752:HG2_Ill_Krunchall_18486:HG2_Ill_GATKHC_21699:HG2_Ill_GATKHCSBGrefine_9053:HG2_Ill_Cortex_1983:HG2_Ill_250bpfermikitraw_18142:HG2_Ill_150bpfermikitraw_17088:HG2_10X_allpass_2174:HG2_PB_assemblyticsfalcon_6157:HG2_Ill_breakscan11_1925:HG3_PB_pbsv_13185:HG2_PB_pbsv_13502:HG2_Ill_Krunchall_18485:HG4_PB_HySA_19736;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_2174:HG2_Ill_150bpfermikitraw_17088:HG2_Ill_250bpfermikitraw_18142:HG2_Ill_Cortex_1983:HG2_Ill_GATKHCSBGrefine_9053:HG2_Ill_GATKHC_21699:HG2_Ill_Krunchall_18486:HG2_Ill_manta_3752:HG2_Ill_scalpel_12789:HG2_Ill_svaba_16912:HG2_PB_assemblyticsPBcR_5979:HG3_10X_allpass_2645:HG3_Ill_150bpfermikitraw_17129:HG3_Ill_250bpfermikitraw_17625:HG3_Ill_Cortex_871:HG3_Ill_GATKHCSBGrefine_8936:HG3_Ill_GATKHC_21583:HG3_Ill_Krunchall_18138:HG3_Ill_manta_3076:HG3_Ill_scalpel_13027:HG3_Ill_svaba_17039:HG3_PB_assemblyticsfalcon_6148:HG4_10X_allpass_2557:HG4_Ill_150bpfermikitraw_17278:HG4_Ill_250bpfermikitraw_17947:HG4_Ill_Cortex_826:HG4_Ill_GATKHCSBGrefine_9338:HG4_Ill_GATKHC_21691:HG4_Ill_Krunchall_18807:HG4_Ill_manta_3185:HG4_Ill_scalpel_12484:HG4_Ill_svaba_16952:HG4_PB_assemblyticsfalcon_6068;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0601504;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.105263;PBcalls=10;Illcalls=29;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-66;DistBack=1238;DistForward=7349;DistMin=1238;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=12:114728331-114728399;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=836.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:45:1/1:0:20:1:17:1/1:0:23:0:21:1/1:0:54:./.:.:.:.:.:.
chr12	115023765	HG3_Ill_manta_3077	GCTGAGGTGGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACC	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_910:HG4_PB_HySA_19740:HG3_PB_pbsv_13189:HG3_PB_HySA_20402:HG2_PB_HySA_24640:HG4_PB_pbsv_13508:HG4_PB_SVrefine2PBcRDovetail_6744:HG4_PB_SVrefine2Falcon1Dovetail_8235:HG4_Ill_svaba_16957:HG4_Ill_scalpel_12488:HG4_Ill_manta_3186:HG4_Ill_SVrefine2DISCOVARDovetail_9671:HG4_Ill_Krunchall_18812:HG4_Ill_GATKHC_21697:HG4_Ill_GATKHCSBGrefine_9342:HG4_Ill_250bpfermikitraw_17952:HG4_Ill_150bpfermikitraw_17282:HG4_CG_vcfBeta_8607:HG4_10X_allpass_2558:HG3_PB_SVrefine2PBcRDovetail_6391:HG3_PB_SVrefine2Falcon1Dovetail_8168:HG3_Ill_svaba_17043:HG3_Ill_scalpel_13030:HG3_Ill_manta_3077:HG3_Ill_SVrefine2DISCOVARDovetail_9804:HG3_Ill_Krunchall_18141:HG3_Ill_GATKHC_21587:HG3_Ill_GATKHCSBGrefine_8938:HG3_Ill_250bpfermikitraw_17629:HG3_Ill_150bpfermikitraw_17132:HG3_CG_vcfBeta_7315:HG3_10X_allpass_2646:HG2_PB_pbsv_13505:HG2_PB_assemblyticsfalcon_6160:HG2_PB_SVrefine2PBcRplusDovetail_2535:HG2_PB_SVrefine2PB10Xhap12_9758:HG2_PB_SVrefine2Falcon2Bionano_6708:HG2_Ill_svaba_16915:HG2_Ill_scalpel_12792:HG2_Ill_manta_3753:HG2_Ill_SpiralSDKrefine_3891:HG2_Ill_SVrefine2DISCOVARplusDovetail_3005:HG2_Ill_Krunchall_18489:HG2_Ill_GATKHC_21703:HG2_Ill_GATKHCSBGrefine_9055:HG2_Ill_FB_11702:HG2_Ill_250bpfermikitraw_18144:HG2_Ill_150bpfermikitraw_17092:HG2_CG_vcfBeta_7683:HG2_10X_SVrefine210Xhap12_9461:HG2_PB_HySA_24639;NumClusterSVs=51;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9461:HG2_CG_vcfBeta_7683:HG2_Ill_150bpfermikitraw_17092:HG2_Ill_250bpfermikitraw_18144:HG2_Ill_FB_11702:HG2_Ill_GATKHCSBGrefine_9055:HG2_Ill_GATKHC_21703:HG2_Ill_Krunchall_18489:HG2_Ill_SVrefine2DISCOVARplusDovetail_3005:HG2_Ill_SpiralSDKrefine_3891:HG2_Ill_manta_3753:HG2_Ill_scalpel_12792:HG2_Ill_svaba_16915:HG2_PB_SVrefine2Falcon2Bionano_6708:HG2_PB_SVrefine2PB10Xhap12_9758:HG2_PB_SVrefine2PBcRplusDovetail_2535:HG2_PB_assemblyticsfalcon_6160:HG2_PB_pbsv_13505:HG3_10X_allpass_2646:HG3_CG_vcfBeta_7315:HG3_Ill_150bpfermikitraw_17132:HG3_Ill_250bpfermikitraw_17629:HG3_Ill_GATKHCSBGrefine_8938:HG3_Ill_GATKHC_21587:HG3_Ill_Krunchall_18141:HG3_Ill_SVrefine2DISCOVARDovetail_9804:HG3_Ill_manta_3077:HG3_Ill_scalpel_13030:HG3_Ill_svaba_17043:HG3_PB_SVrefine2Falcon1Dovetail_8168:HG3_PB_SVrefine2PBcRDovetail_6391:HG4_10X_allpass_2558:HG4_CG_vcfBeta_8607:HG4_Ill_150bpfermikitraw_17282:HG4_Ill_250bpfermikitraw_17952:HG4_Ill_GATKHCSBGrefine_9342:HG4_Ill_GATKHC_21697:HG4_Ill_Krunchall_18812:HG4_Ill_SVrefine2DISCOVARDovetail_9671:HG4_Ill_manta_3186:HG4_Ill_scalpel_12488:HG4_Ill_svaba_16957:HG4_PB_SVrefine2Falcon1Dovetail_8235:HG4_PB_SVrefine2PBcRDovetail_6744:HG4_PB_pbsv_13508;NumExactMatchSVs=45;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.0465116;PBcalls=15;Illcalls=30;TenXcalls=3;CGcalls=3;PBexactcalls=10;Illexactcalls=29;TenXexactcalls=3;CGexactcalls=3;HG2count=21;HG3count=15;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-63;DistBack=-64;DistForward=6088;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:115023766-115023831;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=837.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:60:1/1:0:24:0:18:1/1:0:19:0:13:1/1:0:43:./.:.:.:.:.:.
chr12	115078203	HG3_Ill_Krunchall_18143	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTCTT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17093:HG3_Ill_GATKHC_21591:HG3_Ill_GATKHCSBGrefine_8941:HG2_Ill_GATKHC_21705:HG2_Ill_GATKHCSBGrefine_9056:HG3_PB_pbsv_13191:HG2_PB_HySA_24641:HG2_PB_pbsv_13507:HG3_Ill_manta_3078:HG3_Ill_Krunchall_18143:HG3_Ill_250bpfermikitraw_17632:HG2_Ill_Krunchall_18490:HG2_Ill_250bpfermikitraw_18145;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17093:HG3_Ill_manta_3078:HG3_Ill_Krunchall_18143:HG3_Ill_250bpfermikitraw_17632:HG2_Ill_Krunchall_18490:HG2_Ill_250bpfermikitraw_18145;NumExactMatchSVs=6;ClusterMaxShiftDist=0.172414;ClusterMaxSizeDiff=0.172414;ClusterMaxEditDist=0.189655;PBcalls=3;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-58;DistBack=-35;DistForward=-3;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=196;REFWIDENED=12:115078130-115078383;PctSeqSimilarity=0.9365;PctSizeSimilarity=0.8788;PctRecOverlap=0.8806;SizeDiff=-8;StartDistance=0;EndDistance=-8;GTMatch=0;TruScore=89;MatchId=838.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:0|1:17:2:1:19:./.:16:1:2:15:0/1:22:16:./.:.:.:.:.:.
chr12	116357932	HG2_PB_pbsv_13518	TGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCAATCTCTACTAAAAATATAAAAAATTAGCTGGGCATGGTGGTGGGCACCTGTAGTCCCAGCTACTC	T	20	PASS	ClusterIDs=HG2_10X_allpass_2175:HG3_PB_HySA_20415:HG3_Ill_Krunchall_18157:HG3_PB_pbsv_13203:HG3_Ill_svaba_17056:HG3_Ill_scalpel_13046:HG3_Ill_manta_3081:HG3_Ill_SVrefine2DISCOVARDovetail_9808:HG3_Ill_MetaSV_1234:HG3_Ill_GATKHCSBGrefine_8945:HG3_10X_allpass_2647:HG2_PB_pbsv_13518:HG2_Ill_svaba_16928:HG2_Ill_scalpel_12802:HG2_Ill_SVrefine2DISCOVARplusDovetail_3011:HG2_Ill_MetaSV_1118:HG2_Ill_GATKHCSBGrefine_9060;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_2175:HG3_PB_pbsv_13203:HG3_Ill_svaba_17056:HG3_Ill_scalpel_13046:HG3_Ill_manta_3081:HG3_Ill_SVrefine2DISCOVARDovetail_9808:HG3_Ill_MetaSV_1234:HG3_Ill_GATKHCSBGrefine_8945:HG3_10X_allpass_2647:HG2_PB_pbsv_13518:HG2_Ill_svaba_16928:HG2_Ill_scalpel_12802:HG2_Ill_SVrefine2DISCOVARplusDovetail_3011:HG2_Ill_MetaSV_1118:HG2_Ill_GATKHCSBGrefine_9060;NumExactMatchSVs=15;ClusterMaxShiftDist=0.057971;ClusterMaxSizeDiff=0.057971;ClusterMaxEditDist=0.0724638;PBcalls=3;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-134;DistBack=10382;DistForward=4136;DistMin=4136;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=12:116357933-116358079;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=839.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:15:./.:21:10:4:6:0|1:50:0:1:21:0/1:29:32:./.:.:.:.:.:.
chr12	118536033	HG2_PB_HySA_24692	TGCCTCTCCCTCTCTCTCCGCCTCTCCCTCTCTCTCCGCCTCTCCCTCTCTCTCCGCCTCTCCCTCTCTCTCC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3022:HG2_PB_pbsv_13529:HG3_PB_HySA_20441:HG2_10X_SVrefine210Xhap12_9477:HG3_PB_assemblyticsfalcon_6184:HG2_PB_HySA_24692:HG2_Ill_250bpfermikitraw_18182:HG3_PB_pbsv_13215:HG2_PB_SVrefine2Falcon2Bionano_6720;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18182:HG2_PB_HySA_24692:HG3_PB_assemblyticsfalcon_6184;NumExactMatchSVs=3;ClusterMaxShiftDist=0.111111;ClusterMaxSizeDiff=0.111111;ClusterMaxEditDist=0.234568;PBcalls=6;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-72;DistBack=63643;DistForward=-29;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=116;REFWIDENED=12:118536026-118536213;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=840.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:9:./.:4:8:23:1:./.:6:1:0:3:0/1:14:8:./.:.:.:.:.:.
chr12	120389628	HG4_PB_assemblyticsfalcon_6118	GGGGAGGGGAGGAGAGAGGAATAGGAAGGGGAAGGAAGAAGGGAGGGAAGGGGAGGGGAGGGAAGA	G	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_6118:HG4_Ill_GATKHC_21750:HG2_PB_pbsv_13536:HG4_PB_pbsv_13534:HG3_PB_pbsv_13224:HG2_PB_assemblyticsPBcR_6029;NumClusterSVs=6;ExactMatchIDs=HG4_PB_assemblyticsfalcon_6118;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.03125;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-65;DistBack=-16;DistForward=12682;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=304;REFWIDENED=12:120389443-120389811;PctSeqSimilarity=0.9924;PctSizeSimilarity=0.9846;PctRecOverlap=0.9848;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=841.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:16:./.:12:4:1:18:./.:4:1:14:1:./.:3:0:./.:.:.:.:.:.
chr12	121401666	HG2_PB_SVrefine2PB10Xhap12_9785	CAGAGTCTCACTCTGTCACCCAGGCTGTAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCAGCCTCAGCCTCGCAAGTAGCTGGGATTACAGGCATGTGCCACCATGCCCAGCTAATTTTTGTATTTTTTAGTAGAGACGGGGTTTCGCCACGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACTATGCCTGGCCAATTTTTTTTG	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_1502:HG3_PB_pbsv_13233:HG2_PB_pbsv_13545:HG2_PB_HySA_24717:HG3_Ill_GATKHCSBGrefine_8968:HG2_Ill_MetaSV_1123:HG2_Ill_GATKHCSBGrefine_9080:HG3_Ill_MetaSV_1239:HG4_PB_SVrefine2Falcon1Dovetail_8254:HG3_Ill_SVrefine2DISCOVARDovetail_9843:HG2_PB_SVrefine2PBcRplusDovetail_2554:HG2_PB_SVrefine2PB10Xhap12_9785:HG2_PB_SVrefine2Falcon2Bionano_6729:HG2_PB_SVrefine2Falcon1plusDovetail_2685:HG2_Ill_SVrefine2DISCOVARplusDovetail_3037:HG2_10X_SVrefine210Xhap12_9500;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9500:HG2_Ill_SVrefine2DISCOVARplusDovetail_3037:HG2_PB_SVrefine2Falcon1plusDovetail_2685:HG2_PB_SVrefine2Falcon2Bionano_6729:HG2_PB_SVrefine2PB10Xhap12_9785:HG2_PB_SVrefine2PBcRplusDovetail_2554:HG3_Ill_SVrefine2DISCOVARDovetail_9843:HG4_PB_SVrefine2Falcon1Dovetail_8254;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0205479;ClusterMaxSizeDiff=0.0205479;ClusterMaxEditDist=0.0440678;PBcalls=8;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-289;DistBack=10032;DistForward=-233;DistMin=-233;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=254;REFWIDENED=12:121401667-121402209;PctSeqSimilarity=0.9779;PctSizeSimilarity=1;PctRecOverlap=0.9379;SizeDiff=0;StartDistance=-18;EndDistance=-18;GTMatch=0;TruScore=97;MatchId=842.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:0|1:28:2:1:23:./.:27:1:2:13:0/1:43:18:./.:.:.:.:.:.
chr12	122289583	HG2_PB_SVrefine2Falcon2Bionano_6733	TTATTCATTTATTTATTTATTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTACTTTTTTGTATTTTTTTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1503:HG4_PB_pbsv_13554:HG2_PB_assemblyticsPBcR_6053:HG4_10X_allpass_2562:HG2_10X_allpass_2176:HG4_PB_assemblyticsfalcon_6142:HG3_PB_assemblyticsfalcon_6223:HG2_PB_pbsv_13551:HG2_Ill_Krunchall_18548:HG3_PB_pbsv_13242:HG4_PB_SVrefine2PBcRDovetail_6765:HG4_PB_SVrefine2Falcon1Dovetail_8261:HG4_Ill_manta_3197:HG4_Ill_GATKHCSBGrefine_9371:HG3_PB_SVrefine2PBcRDovetail_6419:HG3_PB_SVrefine2Falcon1Dovetail_8199:HG3_Ill_SVrefine2DISCOVARDovetail_9847:HG3_Ill_GATKHCSBGrefine_8973:HG3_10X_allpass_2653:HG2_PB_SVrefine2PBcRplusDovetail_2558:HG2_PB_SVrefine2PB10Xhap12_9793:HG2_PB_SVrefine2Falcon2Bionano_6733:HG2_PB_SVrefine2Falcon1plusDovetail_2690:HG2_Ill_SVrefine2DISCOVARplusDovetail_3042:HG2_Ill_MetaSV_1125:HG2_Ill_GATKHCSBGrefine_9083;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9083:HG2_Ill_MetaSV_1125:HG2_Ill_SVrefine2DISCOVARplusDovetail_3042:HG2_PB_SVrefine2Falcon1plusDovetail_2690:HG2_PB_SVrefine2Falcon2Bionano_6733:HG2_PB_SVrefine2PB10Xhap12_9793:HG2_PB_SVrefine2PBcRplusDovetail_2558:HG3_10X_allpass_2653:HG3_Ill_GATKHCSBGrefine_8973:HG3_Ill_SVrefine2DISCOVARDovetail_9847:HG3_PB_SVrefine2Falcon1Dovetail_8199:HG3_PB_SVrefine2PBcRDovetail_6419:HG4_Ill_GATKHCSBGrefine_9371:HG4_Ill_manta_3197:HG4_PB_SVrefine2Falcon1Dovetail_8261:HG4_PB_SVrefine2PBcRDovetail_6765;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0739645;ClusterMaxSizeDiff=0.0739645;ClusterMaxEditDist=0.0739645;PBcalls=14;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-345;DistBack=-60;DistForward=-345;DistMin=-345;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=12:122289584-122289941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=843.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:18:0|1:27:1:1:18:./.:33:0:1:18:0/1:20:19:0/1:21:16:.:.:.
chr12	122431878	HG3_Ill_Krunchall_18204	TGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTG	T	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_9084:HG3_Ill_Krunchall_18204:HG2_PB_pbsv_13552:HG2_Ill_Krunchall_18549;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9084:HG3_Ill_Krunchall_18204:HG2_PB_pbsv_13552:HG2_Ill_Krunchall_18549;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=1;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=41731;DistForward=4409;DistMin=4409;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=47;REFWIDENED=12:122431839-122431934;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=844.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:14:0|1:20:4:2:10:./.:4:0:0:1:0/1:21:12:./.:.:.:.:.:.
chr12	122947416	HG3_Ill_scalpel_13085	GACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAA	G	20	PASS	ClusterIDs=HG2_CG_vcfBeta_7716:HG4_PB_HySA_19802:HG2_PB_HySA_24736:HG2_PB_assemblyticsfalcon_6237:HG4_PB_pbsv_13557:HG4_PB_assemblyticsfalcon_6149:HG4_Ill_svaba_17016:HG4_Ill_scalpel_12541:HG4_Ill_Krunchall_18875:HG4_Ill_GATKHC_21772:HG4_Ill_GATKHCSBGrefine_9373:HG4_Ill_FB_11747:HG4_Ill_250bpfermikitraw_18013:HG4_Ill_150bpfermikitraw_17339:HG4_CG_vcfBeta_8646:HG3_PB_pbsv_13246:HG3_Ill_svaba_17108:HG3_Ill_scalpel_13085:HG3_Ill_Krunchall_18206:HG3_Ill_GATKHC_21670:HG3_Ill_GATKHCSBGrefine_8974:HG3_Ill_FB_11768:HG3_Ill_250bpfermikitraw_17689:HG3_Ill_150bpfermikitraw_17201:HG3_CG_vcfBeta_7353:HG2_PB_pbsv_13555:HG2_PB_assemblyticsPBcR_6059:HG2_Ill_svaba_16973:HG2_Ill_scalpel_12842:HG2_Ill_Krunchall_18551:HG2_Ill_GATKHC_21783:HG2_Ill_GATKHCSBGrefine_9085:HG2_Ill_FB_11752:HG2_Ill_250bpfermikitraw_18206:HG2_Ill_150bpfermikitraw_17152;NumClusterSVs=35;ExactMatchIDs=HG2_CG_vcfBeta_7716:HG4_PB_pbsv_13557:HG4_PB_assemblyticsfalcon_6149:HG4_Ill_svaba_17016:HG4_Ill_scalpel_12541:HG4_Ill_Krunchall_18875:HG4_Ill_GATKHC_21772:HG4_Ill_GATKHCSBGrefine_9373:HG4_Ill_FB_11747:HG4_Ill_250bpfermikitraw_18013:HG4_Ill_150bpfermikitraw_17339:HG4_CG_vcfBeta_8646:HG3_PB_pbsv_13246:HG3_Ill_svaba_17108:HG3_Ill_scalpel_13085:HG3_Ill_Krunchall_18206:HG3_Ill_GATKHC_21670:HG3_Ill_GATKHCSBGrefine_8974:HG3_Ill_FB_11768:HG3_Ill_250bpfermikitraw_17689:HG3_Ill_150bpfermikitraw_17201:HG3_CG_vcfBeta_7353:HG2_PB_pbsv_13555:HG2_PB_assemblyticsPBcR_6059:HG2_Ill_svaba_16973:HG2_Ill_scalpel_12842:HG2_Ill_Krunchall_18551:HG2_Ill_GATKHC_21783:HG2_Ill_GATKHCSBGrefine_9085:HG2_Ill_FB_11752:HG2_Ill_250bpfermikitraw_18206:HG2_Ill_150bpfermikitraw_17152;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.038835;PBcalls=8;Illcalls=24;TenXcalls=0;CGcalls=3;PBexactcalls=5;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=3;HG2count=13;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=75277;DistForward=-33;DistMin=-33;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=12:122947415-122947468;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=845.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:36:./.:0:0:0:0:./.:0:0:0:0:1/1:0:58:./.:.:.:.:.:.
chr12	123010338	HG3_PB_SVrefine2PBcRDovetail_6421	TCAACGAAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGGGATCTCGGTTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1928:HG4_PB_assemblyticsfalcon_6150:HG2_PB_assemblyticsPBcR_6060:HG3_PB_assemblyticsfalcon_6230:HG2_PB_assemblyticsfalcon_6238:HG3_Ill_Krunchall_18207:HG2_Ill_Krunchall_18552:HG4_PB_HySA_19803:HG3_PB_HySA_20468:HG2_PB_HySA_24737:HG3_Ill_MetaSV_1244:HG2_Ill_tnscope_1504:HG2_Ill_MetaSV_1126:HG4_PB_pbsv_13558:HG4_PB_SVrefine2PBcRDovetail_6767:HG4_PB_SVrefine2Falcon1Dovetail_8265:HG4_Ill_scalpel_12542:HG4_Ill_manta_3198:HG4_Ill_SVrefine2DISCOVARDovetail_9719:HG4_Ill_MetaSV_1202:HG4_Ill_GATKHCSBGrefine_9374:HG4_10X_allpass_2563:HG3_PB_pbsv_13247:HG3_PB_SVrefine2PBcRDovetail_6421:HG3_PB_SVrefine2Falcon1Dovetail_8202:HG3_Ill_scalpel_13086:HG3_Ill_manta_3088:HG3_Ill_SVrefine2DISCOVARDovetail_9849:HG3_Ill_GATKHCSBGrefine_8975:HG3_10X_allpass_2654:HG2_PB_pbsv_13556:HG2_PB_SVrefine2PBcRplusDovetail_2560:HG2_PB_SVrefine2PB10Xhap12_9795:HG2_PB_SVrefine2Falcon2Bionano_6734:HG2_PB_SVrefine2Falcon1plusDovetail_2691:HG2_Ill_scalpel_12843:HG2_Ill_manta_3760:HG2_Ill_SVrefine2DISCOVARplusDovetail_3046:HG2_Ill_GATKHCSBGrefine_9086:HG2_10X_allpass_2177:HG2_10X_SVrefine210Xhap12_9510;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9510:HG2_10X_allpass_2177:HG2_Ill_GATKHCSBGrefine_9086:HG2_Ill_SVrefine2DISCOVARplusDovetail_3046:HG2_Ill_manta_3760:HG2_Ill_scalpel_12843:HG2_PB_SVrefine2Falcon1plusDovetail_2691:HG2_PB_SVrefine2Falcon2Bionano_6734:HG2_PB_SVrefine2PB10Xhap12_9795:HG2_PB_SVrefine2PBcRplusDovetail_2560:HG2_PB_pbsv_13556:HG3_10X_allpass_2654:HG3_Ill_GATKHCSBGrefine_8975:HG3_Ill_SVrefine2DISCOVARDovetail_9849:HG3_Ill_manta_3088:HG3_Ill_scalpel_13086:HG3_PB_SVrefine2Falcon1Dovetail_8202:HG3_PB_SVrefine2PBcRDovetail_6421:HG3_PB_pbsv_13247:HG4_10X_allpass_2563:HG4_Ill_GATKHCSBGrefine_9374:HG4_Ill_MetaSV_1202:HG4_Ill_SVrefine2DISCOVARDovetail_9719:HG4_Ill_manta_3198:HG4_Ill_scalpel_12542:HG4_PB_SVrefine2Falcon1Dovetail_8265:HG4_PB_SVrefine2PBcRDovetail_6767:HG4_PB_pbsv_13558;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0771605;ClusterMaxSizeDiff=0.0771605;ClusterMaxEditDist=0.0771605;PBcalls=18;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-330;DistForward=52904;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=12:123010339-123010680;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=846.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:2:16:0:26:1/1:0:16:0:9:1/1:0:49:1/1:1:21:.:.:.
chr12	123147735	HG2_10X_SVrefine210Xhap12_9511	CCCTCCCTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCCCTCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCCTCCTTCCTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9511:HG4_PB_HySA_19805:HG2_PB_HySA_24739:HG2_PB_pbsv_13557:HG4_PB_pbsv_13559:HG4_PB_SVrefine2PBcRDovetail_6769:HG4_PB_SVrefine2Falcon1Dovetail_8266:HG4_Ill_svaba_17017:HG4_Ill_SVrefine2DISCOVARDovetail_9720:HG4_Ill_Krunchall_18876:HG4_Ill_GATKHCSBGrefine_9375:HG4_Ill_250bpfermikitraw_18014:HG3_PB_pbsv_13248:HG3_Ill_svaba_17109:HG2_PB_SVrefine2PBcRplusDovetail_2561:HG2_PB_SVrefine2PB10Xhap12_9796:HG2_PB_SVrefine2Falcon2Bionano_6735:HG2_PB_SVrefine2Falcon1plusDovetail_2692:HG2_Ill_svaba_16974:HG2_Ill_SpiralSDKrefine_3930:HG2_Ill_SVrefine2DISCOVARplusDovetail_3047:HG2_Ill_GATKHCSBGrefine_9087:HG2_Ill_250bpfermikitraw_18207;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9511:HG4_PB_SVrefine2PBcRDovetail_6769:HG4_PB_SVrefine2Falcon1Dovetail_8266:HG4_Ill_svaba_17017:HG4_Ill_SVrefine2DISCOVARDovetail_9720:HG4_Ill_Krunchall_18876:HG4_Ill_GATKHCSBGrefine_9375:HG4_Ill_250bpfermikitraw_18014:HG3_PB_pbsv_13248:HG3_Ill_svaba_17109:HG2_PB_SVrefine2PBcRplusDovetail_2561:HG2_PB_SVrefine2PB10Xhap12_9796:HG2_PB_SVrefine2Falcon2Bionano_6735:HG2_PB_SVrefine2Falcon1plusDovetail_2692:HG2_Ill_svaba_16974:HG2_Ill_SpiralSDKrefine_3930:HG2_Ill_SVrefine2DISCOVARplusDovetail_3047:HG2_Ill_GATKHCSBGrefine_9087:HG2_Ill_250bpfermikitraw_18207;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0224719;ClusterMaxSizeDiff=0.0224719;ClusterMaxEditDist=0.0564972;PBcalls=11;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-88;DistBack=33140;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=116;REFWIDENED=12:123147736-123147939;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=847.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:./.:5:4:1:8:1/1:1:7:0:9:1/1:0:43:./.:.:.:.:.:.
chr12	124795816	HG2_Ill_GATKHC_21801	TCTGCTATTCTGATCAGCTTCCTGTGCCCCTCGACAGGCCTGGCCAGCTCCCACCTGTGTGTTCCTCCCTGGCAGGTGTGCCACAGACACAGGTGTGGTGGGGTCTCTACCCCTCTGGAGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9520:HG4_Ill_Krunchall_18894:HG2_Ill_Krunchall_18570:HG4_PB_pbsv_13576:HG4_PB_assemblyticsfalcon_6174:HG4_PB_SVrefine2Falcon1Dovetail_8276:HG4_Ill_svaba_17034:HG4_Ill_manta_3200:HG4_Ill_MetaSV_1205:HG4_Ill_GATKHC_21788:HG4_Ill_GATKHCSBGrefine_9388:HG4_Ill_Cortex_837:HG4_CG_vcfBeta_8661:HG4_10X_allpass_2564:HG3_PB_assemblyticsfalcon_6254:HG3_PB_SVrefine2Falcon1Dovetail_8213:HG2_PB_pbsv_13572:HG2_PB_assemblyticsfalcon_6265:HG2_PB_SVrefine2PBcRplusDovetail_2568:HG2_PB_SVrefine2PB10Xhap12_9806:HG2_PB_SVrefine2Falcon1plusDovetail_2701:HG2_Ill_svaba_16992:HG2_Ill_scalpel_12857:HG2_Ill_manta_3763:HG2_Ill_breakscan11_1931:HG2_Ill_MetaSV_1128:HG2_Ill_GATKHC_21801:HG2_Ill_GATKHCSBGrefine_9100:HG2_Ill_Cortex_2006:HG2_CG_vcfBeta_7728:HG2_10X_allpass_2179;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9520:HG4_PB_pbsv_13576:HG4_PB_assemblyticsfalcon_6174:HG4_PB_SVrefine2Falcon1Dovetail_8276:HG4_Ill_svaba_17034:HG4_Ill_manta_3200:HG4_Ill_MetaSV_1205:HG4_Ill_GATKHC_21788:HG4_Ill_GATKHCSBGrefine_9388:HG4_Ill_Cortex_837:HG4_CG_vcfBeta_8661:HG4_10X_allpass_2564:HG3_PB_assemblyticsfalcon_6254:HG3_PB_SVrefine2Falcon1Dovetail_8213:HG2_PB_pbsv_13572:HG2_PB_assemblyticsfalcon_6265:HG2_PB_SVrefine2PBcRplusDovetail_2568:HG2_PB_SVrefine2PB10Xhap12_9806:HG2_PB_SVrefine2Falcon1plusDovetail_2701:HG2_Ill_svaba_16992:HG2_Ill_scalpel_12857:HG2_Ill_manta_3763:HG2_Ill_breakscan11_1931:HG2_Ill_MetaSV_1128:HG2_Ill_GATKHC_21801:HG2_Ill_GATKHCSBGrefine_9100:HG2_Ill_Cortex_2006:HG2_CG_vcfBeta_7728:HG2_10X_allpass_2179;NumExactMatchSVs=29;ClusterMaxShiftDist=0.00829876;ClusterMaxSizeDiff=0.00829876;ClusterMaxEditDist=0.00829876;PBcalls=10;Illcalls=16;TenXcalls=3;CGcalls=2;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=2;HG2count=17;HG3count=2;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-120;DistBack=756;DistForward=-117;DistMin=-117;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=12:124795817-124795940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=848.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:31:0|1:25:8:3:18:1|0:0:12:23:0:0/1:38:22:./.:.:.:.:.:.
chr12	125334351	HG2_PB_SVrefine2Falcon1plusDovetail_2710	GTAATCCCAGCACTTTGGAAGACCAAGGTGGGAGGATTGCTTGAGGCCAGGAGTTCAAGACCAGCCTGGGCAACATAGCAAGACCCCTGTCTCTACAAAAAATCTAAAAATTAGCTGGGCATGGTGGTGCACACCTGTAGTCCCAGTTATTCAGGAGGCCAAGGTAGGAGGATCGATTGAGCCTGAGTGGTTGAAGCTGCAGTGAGCCGTAATCATGCCACTGCACTCCAGCTTGGGTGACAGAGTGAGACCCTGTCTCAAAAAATCTAAATAAATAAATAATAAAGGGTGGGCACTGTGGCATATGCTTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9521:HG3_Ill_Krunchall_18233:HG2_PB_pbsv_13584:HG2_PB_HySA_24786:HG3_PB_HySA_20509:HG3_Ill_manta_3092:HG3_Ill_GATKHCSBGrefine_8988:HG3_10X_allpass_2657:HG2_Ill_SpiralSDKrefine_3948:HG2_Ill_GATKHCSBGrefine_9106:HG2_Ill_MetaSV_1131:HG3_PB_pbsv_13272:HG2_Ill_tnscope_1505:HG3_PB_SVrefine2Falcon1Dovetail_8222:HG3_Ill_SVrefine2DISCOVARDovetail_9864:HG2_PB_SVrefine2Falcon2Bionano_6750:HG2_PB_SVrefine2Falcon1plusDovetail_2710:HG2_Ill_SVrefine2DISCOVARplusDovetail_3062;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9521:HG3_PB_SVrefine2Falcon1Dovetail_8222:HG3_Ill_SVrefine2DISCOVARDovetail_9864:HG2_PB_SVrefine2Falcon2Bionano_6750:HG2_PB_SVrefine2Falcon1plusDovetail_2710:HG2_Ill_SVrefine2DISCOVARplusDovetail_3062;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00643087;ClusterMaxSizeDiff=0.00643087;ClusterMaxEditDist=0.0353698;PBcalls=7;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-405;DistForward=-254;DistMin=-405;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=537;REFWIDENED=12:125334352-125335198;PctSeqSimilarity=0.9635;PctSizeSimilarity=1;PctRecOverlap=0.8521;SizeDiff=0;StartDistance=-46;EndDistance=-46;GTMatch=0;TruScore=93;MatchId=849.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:26:0|1:28:0:6:24:./.:47:0:6:10:0/1:49:13:./.:31:3:.:.:.
chr12	125433332	HG2_Ill_150bpfermikitraw_17178	AAAACATAATTCTCTAGACAGGCCTTCTAAAAAATAAATAATAATAATAAAATAAAAGAGAAGGCAAAGGGTCCCCTTCCCCT	A	20	PASS	ClusterIDs=HG2_10X_allpass_2180:HG2_PB_assemblyticsfalcon_6282:HG4_PB_pbsv_13590:HG3_PB_pbsv_13275:HG2_PB_pbsv_13585:HG4_PB_assemblyticsfalcon_6191:HG4_Ill_svaba_17046:HG4_Ill_scalpel_12564:HG4_Ill_manta_3204:HG4_Ill_Krunchall_18904:HG4_Ill_GATKHC_21805:HG4_Ill_GATKHCSBGrefine_9396:HG4_Ill_250bpfermikitraw_18041:HG4_Ill_150bpfermikitraw_17360:HG4_CG_vcfBeta_8670:HG4_10X_allpass_2565:HG3_PB_assemblyticsfalcon_6276:HG3_Ill_svaba_17136:HG3_Ill_scalpel_13102:HG3_Ill_manta_3094:HG3_Ill_Krunchall_18236:HG3_Ill_GATKHC_21699:HG3_Ill_GATKHCSBGrefine_8989:HG3_Ill_250bpfermikitraw_17716:HG3_Ill_150bpfermikitraw_17227:HG3_CG_vcfBeta_7377:HG2_PB_assemblyticsPBcR_6097:HG2_Ill_svaba_17003:HG2_Ill_scalpel_12864:HG2_Ill_manta_3765:HG2_Ill_Krunchall_18582:HG2_Ill_GATKHC_21812:HG2_Ill_GATKHCSBGrefine_9107:HG2_Ill_250bpfermikitraw_18238:HG2_Ill_150bpfermikitraw_17178:HG2_CG_vcfBeta_7733;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_2180:HG4_PB_assemblyticsfalcon_6191:HG4_Ill_svaba_17046:HG4_Ill_scalpel_12564:HG4_Ill_manta_3204:HG4_Ill_Krunchall_18904:HG4_Ill_GATKHC_21805:HG4_Ill_GATKHCSBGrefine_9396:HG4_Ill_250bpfermikitraw_18041:HG4_Ill_150bpfermikitraw_17360:HG4_CG_vcfBeta_8670:HG4_10X_allpass_2565:HG3_PB_assemblyticsfalcon_6276:HG3_Ill_svaba_17136:HG3_Ill_scalpel_13102:HG3_Ill_manta_3094:HG3_Ill_Krunchall_18236:HG3_Ill_GATKHC_21699:HG3_Ill_GATKHCSBGrefine_8989:HG3_Ill_250bpfermikitraw_17716:HG3_Ill_150bpfermikitraw_17227:HG3_CG_vcfBeta_7377:HG2_PB_assemblyticsPBcR_6097:HG2_Ill_svaba_17003:HG2_Ill_scalpel_12864:HG2_Ill_manta_3765:HG2_Ill_Krunchall_18582:HG2_Ill_GATKHC_21812:HG2_Ill_GATKHCSBGrefine_9107:HG2_Ill_250bpfermikitraw_18238:HG2_Ill_150bpfermikitraw_17178:HG2_CG_vcfBeta_7733;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0121212;ClusterMaxSizeDiff=0.0121212;ClusterMaxEditDist=0.0242424;PBcalls=7;Illcalls=24;TenXcalls=2;CGcalls=3;PBexactcalls=3;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=3;HG2count=13;HG3count=11;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-82;DistBack=-85;DistForward=10058;DistMin=-85;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=12:125433333-125433420;PctSeqSimilarity=0.9274;PctSizeSimilarity=0.8632;PctRecOverlap=0.8646;SizeDiff=-13;StartDistance=13;EndDistance=0;GTMatch=0;TruScore=88;MatchId=850.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:1/1:2:29:0:25:1/1:0:11:0:10:1/1:0:37:./.:.:.:.:.:.
chr12	125599208	HG2_PB_assemblyticsPBcR_6103	GCACATGGTAAGGGCTTCCCCAGGTGCTGGCCTGTGCTATACCACAATAGGGGCTTCCCTGGGTGCCAGCCCATGA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_18243:HG2_Ill_breakscan11_1935:HG2_PB_HySA_24793:HG4_PB_pbsv_13594:HG4_Ill_GATKHC_21809:HG4_Ill_GATKHCSBGrefine_9401:HG4_Ill_250bpfermikitraw_18047:HG4_Ill_150bpfermikitraw_17364:HG2_PB_pbsv_13590:HG2_PB_assemblyticsfalcon_6289:HG2_PB_assemblyticsPBcR_6103:HG2_Ill_Krunchall_18585:HG2_Ill_GATKHC_21815:HG2_Ill_GATKHCSBGrefine_9109;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18243:HG4_Ill_GATKHC_21809:HG4_Ill_GATKHCSBGrefine_9401:HG4_Ill_250bpfermikitraw_18047:HG4_Ill_150bpfermikitraw_17364:HG2_PB_pbsv_13590:HG2_PB_assemblyticsfalcon_6289:HG2_PB_assemblyticsPBcR_6103:HG2_Ill_Krunchall_18585:HG2_Ill_GATKHC_21815:HG2_Ill_GATKHCSBGrefine_9109;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.0392157;PBcalls=5;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-75;DistBack=4446;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=301;REFWIDENED=12:125599186-125599561;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=851.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:18:0|1:22:1:0:17:1|0:0:15:23:1:0/1:24:16:./.:.:.:.:.:.
chr12	126019196	HG3_Ill_manta_3095	ATTATTTTTATTATTACTATTACTACCATCACTACTACCATTACAGTTACATCCACT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9526:HG4_PB_HySA_19861:HG3_PB_pbsv_13283:HG4_PB_pbsv_13600:HG2_PB_HySA_24801:HG3_PB_HySA_20515:HG2_PB_pbsv_13596:HG4_PB_SVrefine2PBcRDovetail_6788:HG4_Ill_svaba_17051:HG4_Ill_manta_3206:HG4_Ill_Krunchall_18911:HG4_Ill_GATKHCSBGrefine_9404:HG4_Ill_250bpfermikitraw_18052:HG4_Ill_150bpfermikitraw_17368:HG3_PB_SVrefine2Falcon1Dovetail_8227:HG3_Ill_svaba_17142:HG3_Ill_manta_3095:HG3_Ill_SVrefine2DISCOVARDovetail_9869:HG3_Ill_Krunchall_18241:HG3_Ill_GATKHCSBGrefine_8995:HG3_Ill_250bpfermikitraw_17722:HG3_Ill_150bpfermikitraw_17235:HG2_PB_SVrefine2Falcon2Bionano_6755:HG2_PB_SVrefine2Falcon1plusDovetail_2716:HG2_Ill_svaba_17008:HG2_Ill_manta_3769:HG2_Ill_SpiralSDKrefine_3956:HG2_Ill_Krunchall_18590:HG2_Ill_GATKHCSBGrefine_9113:HG2_Ill_250bpfermikitraw_18249:HG2_Ill_150bpfermikitraw_17188;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9526:HG4_PB_SVrefine2PBcRDovetail_6788:HG4_Ill_svaba_17051:HG4_Ill_manta_3206:HG4_Ill_Krunchall_18911:HG4_Ill_GATKHCSBGrefine_9404:HG4_Ill_250bpfermikitraw_18052:HG4_Ill_150bpfermikitraw_17368:HG3_PB_SVrefine2Falcon1Dovetail_8227:HG3_Ill_svaba_17142:HG3_Ill_manta_3095:HG3_Ill_SVrefine2DISCOVARDovetail_9869:HG3_Ill_Krunchall_18241:HG3_Ill_GATKHCSBGrefine_8995:HG3_Ill_250bpfermikitraw_17722:HG3_Ill_150bpfermikitraw_17235:HG2_PB_SVrefine2Falcon2Bionano_6755:HG2_PB_SVrefine2Falcon1plusDovetail_2716:HG2_Ill_svaba_17008:HG2_Ill_manta_3769:HG2_Ill_SpiralSDKrefine_3956:HG2_Ill_Krunchall_18590:HG2_Ill_GATKHCSBGrefine_9113:HG2_Ill_250bpfermikitraw_18249:HG2_Ill_150bpfermikitraw_17188;NumExactMatchSVs=25;ClusterMaxShiftDist=0.12844;ClusterMaxSizeDiff=0.12844;ClusterMaxEditDist=0.150943;PBcalls=10;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=7177;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=53;REFWIDENED=12:126019197-126019305;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=853.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:23:0|1:34:1:3:21:0|1:21:0:0:10:0/1:31:21:./.:.:.:.:.:.
chr12	126825401	HG2_10X_allpass_2182	AAGGAGCTACCTAAAAAGAAAGATGCAGCAAAGAGTCATAAACAAGTTATTTATTTATTTCTTTTTAGAGACGGAGTCTTGCTTTGTCACCC	A	20	PASS	ClusterIDs=HG3_Ill_Spiral_14219:HG3_PB_assemblyticsfalcon_6297:HG2_Ill_Spiral_913:HG3_PB_pbsv_13289:HG3_PB_SVrefine2PBcRDovetail_6447:HG3_PB_SVrefine2Falcon1Dovetail_8234:HG3_Ill_svaba_17151:HG3_Ill_scalpel_13114:HG3_Ill_SVrefine2DISCOVARDovetail_9876:HG3_Ill_Krunchall_18251:HG3_Ill_GATKHC_21716:HG3_Ill_GATKHCSBGrefine_8997:HG3_Ill_250bpfermikitraw_17731:HG3_Ill_150bpfermikitraw_17245:HG3_CG_vcfBeta_7385:HG3_10X_allpass_2658:HG2_PB_pbsv_13601:HG2_PB_SVrefine2Falcon2Bionano_6758:HG2_Ill_svaba_17018:HG2_Ill_breakscan11_1938:HG2_Ill_SpiralSDKrefine_3961:HG2_Ill_Krunchall_18600:HG2_Ill_GATKHC_21831:HG2_Ill_GATKHCSBGrefine_9116:HG2_Ill_250bpfermikitraw_18261:HG2_Ill_150bpfermikitraw_17197:HG2_CG_vcfBeta_7744:HG2_10X_allpass_2182:HG2_10X_SVrefine210Xhap12_9531;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9531:HG2_10X_allpass_2182:HG2_CG_vcfBeta_7744:HG2_Ill_150bpfermikitraw_17197:HG2_Ill_250bpfermikitraw_18261:HG2_Ill_GATKHCSBGrefine_9116:HG2_Ill_GATKHC_21831:HG2_Ill_Krunchall_18600:HG2_Ill_SpiralSDKrefine_3961:HG2_Ill_breakscan11_1938:HG2_Ill_svaba_17018:HG2_PB_SVrefine2Falcon2Bionano_6758:HG2_PB_pbsv_13601:HG3_10X_allpass_2658:HG3_CG_vcfBeta_7385:HG3_Ill_150bpfermikitraw_17245:HG3_Ill_250bpfermikitraw_17731:HG3_Ill_GATKHCSBGrefine_8997:HG3_Ill_GATKHC_21716:HG3_Ill_Krunchall_18251:HG3_Ill_SVrefine2DISCOVARDovetail_9876:HG3_Ill_scalpel_13114:HG3_Ill_svaba_17151:HG3_PB_SVrefine2Falcon1Dovetail_8234:HG3_PB_SVrefine2PBcRDovetail_6447:HG3_PB_pbsv_13289;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0552486;ClusterMaxSizeDiff=0.0552486;ClusterMaxEditDist=0.0552486;PBcalls=6;Illcalls=18;TenXcalls=3;CGcalls=2;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=2;HG2count=14;HG3count=15;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-91;DistBack=-91;DistForward=8939;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:126825402-126825495;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=854.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:0|1:25:1:1:24:0|1:40:0:0:24:0/1:34:15:./.:.:.:.:.:.
chr12	126905101	HG4_Ill_scalpel_12580	CAAGAAGTATTTTTATGCCGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGGCGGGAGAAGGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_6300:HG4_Ill_Krunchall_18923:HG3_Ill_Krunchall_18254:HG2_Ill_Krunchall_18602:HG4_PB_assemblyticsfalcon_6208:HG2_PB_pbsv_13603:HG4_PB_pbsv_13606:HG4_PB_HySA_19872:HG4_Ill_MetaSV_1208:HG2_Ill_tnscope_1507:HG2_Ill_MetaSV_1136:HG4_PB_SVrefine2PBcRDovetail_6792:HG4_PB_SVrefine2Falcon1Dovetail_8297:HG4_Ill_scalpel_12580:HG4_Ill_manta_3207:HG4_Ill_SVrefine2DISCOVARDovetail_9741:HG4_Ill_GATKHCSBGrefine_9406:HG4_10X_allpass_2566:HG3_Ill_scalpel_13116:HG3_Ill_SVrefine2DISCOVARDovetail_9877:HG3_Ill_MetaSV_1253:HG3_Ill_Krunchall_18253:HG3_Ill_GATKHCSBGrefine_8998:HG3_10X_allpass_2659:HG2_Ill_scalpel_12877:HG2_Ill_SVrefine2DISCOVARplusDovetail_3074:HG2_Ill_GATKHCSBGrefine_9117:HG2_10X_allpass_2183:HG2_10X_SVrefine210Xhap12_9532:HG3_PB_pbsv_13291:HG2_Ill_breakscan11_1939:HG3_PB_SVrefine2Falcon1Dovetail_8236;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9532:HG2_10X_allpass_2183:HG2_Ill_GATKHCSBGrefine_9117:HG2_Ill_SVrefine2DISCOVARplusDovetail_3074:HG2_Ill_scalpel_12877:HG3_10X_allpass_2659:HG3_Ill_GATKHCSBGrefine_8998:HG3_Ill_Krunchall_18253:HG3_Ill_MetaSV_1253:HG3_Ill_SVrefine2DISCOVARDovetail_9877:HG3_Ill_scalpel_13116:HG4_10X_allpass_2566:HG4_Ill_GATKHCSBGrefine_9406:HG4_Ill_SVrefine2DISCOVARDovetail_9741:HG4_Ill_manta_3207:HG4_Ill_scalpel_12580:HG4_PB_SVrefine2Falcon1Dovetail_8297:HG4_PB_SVrefine2PBcRDovetail_6792;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0941558;ClusterMaxSizeDiff=0.0941558;ClusterMaxEditDist=0.168168;PBcalls=9;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=15222;DistForward=-304;DistMin=-304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=12:126905102-126905430;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=855.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:25:0|1:45:1:4:24:1|0:0:20:31:0:0/1:18:12:0/1:17:8:.:.:0.59495
chr12	127199948	HG2_10X_SVrefine210Xhap12_9534	TGGATGTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9534:HG2_PB_assemblyticsPBcR_6123:HG4_Ill_Krunchall_18933:HG2_Ill_Krunchall_18610:HG2_PB_HySA_24822:HG2_PB_pbsv_13607:HG4_PB_pbsv_13612:HG4_Ill_MetaSV_1210:HG2_Ill_tnscope_1508:HG2_Ill_MetaSV_1137:HG4_PB_SVrefine2PBcRDovetail_6795:HG4_Ill_manta_3209:HG4_Ill_SVrefine2DISCOVARDovetail_9744:HG4_Ill_GATKHCSBGrefine_9410:HG4_10X_allpass_2568:HG2_PB_assemblyticsfalcon_6310:HG2_PB_SVrefine2PBcRplusDovetail_2580:HG2_PB_SVrefine2PB10Xhap12_9821:HG2_PB_SVrefine2Falcon2Bionano_6761:HG2_PB_SVrefine2Falcon1plusDovetail_2721:HG2_Ill_SpiralSDKrefine_3964:HG2_Ill_SVrefine2DISCOVARplusDovetail_3075:HG2_Ill_GATKHCSBGrefine_9120:HG2_10X_allpass_2185;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9534:HG4_PB_SVrefine2PBcRDovetail_6795:HG4_Ill_manta_3209:HG4_Ill_SVrefine2DISCOVARDovetail_9744:HG4_Ill_GATKHCSBGrefine_9410:HG4_10X_allpass_2568:HG2_PB_assemblyticsfalcon_6310:HG2_PB_SVrefine2PBcRplusDovetail_2580:HG2_PB_SVrefine2PB10Xhap12_9821:HG2_PB_SVrefine2Falcon2Bionano_6761:HG2_PB_SVrefine2Falcon1plusDovetail_2721:HG2_Ill_SpiralSDKrefine_3964:HG2_Ill_SVrefine2DISCOVARplusDovetail_3075:HG2_Ill_GATKHCSBGrefine_9120:HG2_10X_allpass_2185;NumExactMatchSVs=15;ClusterMaxShiftDist=0.087218;ClusterMaxSizeDiff=0.087218;ClusterMaxEditDist=0.087218;PBcalls=10;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=-170;DistForward=-329;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=12:127199949-127200302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=856.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:28:0|1:35:0:1:29:1|0:0:27:59:1:0/1:43:23:0/1:28:6:.:.:.
chr12	127212965	HG3_10X_allpass_2660	TTGGTGGTGGAGTGGGCAGAGAAGCTTCCCCAAGGAGGTTTACTTGGGAGCTGATACTTGAGTGAAGTGAGGGAAGAGGCCAGAGAATACCTGGGGAGGAGCTGTCCAGGCAAGGGAACAACTAGTGTGCAAAAGCCCGGAGGCTGGAATTAGCTGGGTGCCTGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9535:HG3_PB_HySA_20540:HG4_PB_pbsv_13613:HG2_PB_pbsv_13608:HG3_PB_SVrefine2Falcon1Dovetail_8239:HG3_PB_assemblyticsfalcon_6307:HG3_PB_pbsv_13294:HG4_PB_SVrefine2PBcRDovetail_6796:HG4_PB_SVrefine2Falcon1Dovetail_8299:HG4_Ill_SVrefine2DISCOVARDovetail_9745:HG4_10X_allpass_2569:HG3_PB_SVrefine2PBcRDovetail_6450:HG3_Ill_SVrefine2DISCOVARDovetail_9881:HG3_Ill_250bpfermikitraw_17741:HG3_Ill_150bpfermikitraw_17252:HG3_10X_allpass_2660:HG2_PB_SVrefine2PBcRplusDovetail_2581:HG2_PB_SVrefine2PB10Xhap12_9822:HG2_PB_SVrefine2Falcon2Bionano_6762:HG2_PB_SVrefine2Falcon1plusDovetail_2722:HG2_Ill_SVrefine2DISCOVARplusDovetail_3076:HG2_10X_allpass_2186;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9535:HG4_PB_SVrefine2PBcRDovetail_6796:HG4_PB_SVrefine2Falcon1Dovetail_8299:HG4_Ill_SVrefine2DISCOVARDovetail_9745:HG4_10X_allpass_2569:HG3_PB_SVrefine2PBcRDovetail_6450:HG3_Ill_SVrefine2DISCOVARDovetail_9881:HG3_Ill_250bpfermikitraw_17741:HG3_Ill_150bpfermikitraw_17252:HG3_10X_allpass_2660:HG2_PB_SVrefine2PBcRplusDovetail_2581:HG2_PB_SVrefine2PB10Xhap12_9822:HG2_PB_SVrefine2Falcon2Bionano_6762:HG2_PB_SVrefine2Falcon1plusDovetail_2722:HG2_Ill_SVrefine2DISCOVARplusDovetail_3076:HG2_10X_allpass_2186;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0182371;ClusterMaxSizeDiff=0.0182371;ClusterMaxEditDist=0.0243902;PBcalls=13;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=4;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-164;DistBack=12674;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=164;REFWIDENED=12:127212966-127213293;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=857.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:0:28:1:17:./.:0:2:0:1:1/1:0:20:./.:.:.:.:.:.
chr12	127502624	HG2_Ill_SVrefine2DISCOVARplusDovetail_3079	CAAGAACCCAGCTGCCCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCAGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2583:HG3_Ill_GATKHCSBGrefine_9004:HG2_Ill_GATKHCSBGrefine_9125:HG2_PB_SVrefine2Falcon1plusDovetail_2727:HG2_Ill_SVrefine2DISCOVARplusDovetail_3080:HG3_Ill_Spiral_14227:HG2_Ill_Spiral_914:HG3_Ill_Krunchall_18265:HG2_Ill_Krunchall_18614:HG3_PB_assemblyticsfalcon_6316:HG3_PB_HySA_20549:HG2_PB_SVrefine2PB10Xhap12_9824:HG3_PB_pbsv_13300:HG2_PB_HySA_24828:HG3_PB_SVrefine2PBcRDovetail_6452:HG3_PB_SVrefine2Falcon1Dovetail_8243:HG3_Ill_SVrefine2DISCOVARDovetail_9883:HG3_Ill_MetaSV_1255:HG3_10X_allpass_2661:HG2_PB_pbsv_13613:HG2_Ill_SVrefine2DISCOVARplusDovetail_3079:HG2_Ill_MetaSV_1139:HG2_10X_SVrefine210Xhap12_9537;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9537:HG2_Ill_MetaSV_1139:HG2_Ill_SVrefine2DISCOVARplusDovetail_3079:HG2_PB_pbsv_13613:HG3_10X_allpass_2661:HG3_Ill_MetaSV_1255:HG3_Ill_SVrefine2DISCOVARDovetail_9883:HG3_PB_SVrefine2Falcon1Dovetail_8243:HG3_PB_SVrefine2PBcRDovetail_6452:HG3_PB_pbsv_13300;NumExactMatchSVs=10;ClusterMaxShiftDist=0.200855;ClusterMaxSizeDiff=0.200855;ClusterMaxEditDist=0.200855;PBcalls=10;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-228;DistBack=-246;DistForward=-184;DistMin=-246;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=12:127502625-127502866;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=858.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:33:0|1:31:3:5:35:0|1:27:0:0:23:0/1:13:16:./.:.:.:.:.:.
chr12	127660426	HG3_Ill_scalpel_13126	TAAAAACTCATTGCTTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1940:HG3_PB_HySA_20551:HG3_PB_assemblyticsfalcon_6317:HG2_PB_assemblyticsfalcon_6323:HG2_PB_assemblyticsPBcR_6130:HG4_PB_assemblyticsfalcon_6221:HG2_Ill_Krunchall_18616:HG4_PB_HySA_19888:HG4_Ill_MetaSV_1213:HG2_Ill_tnscope_1509:HG4_PB_SVrefine2Falcon1Dovetail_8303:HG4_Ill_svaba_17068:HG4_Ill_scalpel_12588:HG4_Ill_manta_3210:HG4_Ill_SVrefine2DISCOVARDovetail_9747:HG4_Ill_GATKHCSBGrefine_9413:HG4_10X_allpass_2570:HG3_PB_pbsv_13302:HG3_PB_SVrefine2PBcRDovetail_6455:HG3_PB_SVrefine2Falcon1Dovetail_8245:HG3_Ill_svaba_17164:HG3_Ill_scalpel_13126:HG3_Ill_SVrefine2DISCOVARDovetail_9884:HG3_Ill_GATKHCSBGrefine_9006:HG3_10X_allpass_2662:HG2_PB_pbsv_13615:HG2_PB_SVrefine2PBcRplusDovetail_2584:HG2_PB_SVrefine2PB10Xhap12_9825:HG2_PB_SVrefine2Falcon2Bionano_6765:HG2_PB_SVrefine2Falcon1plusDovetail_2728:HG2_PB_HySA_24830:HG2_Ill_svaba_17030:HG2_Ill_scalpel_12884:HG2_Ill_manta_3771:HG2_Ill_SVrefine2DISCOVARplusDovetail_3081:HG2_Ill_GATKHCSBGrefine_9126:HG2_10X_SVrefine210Xhap12_9538:HG4_PB_pbsv_13617;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9538:HG2_Ill_GATKHCSBGrefine_9126:HG2_Ill_SVrefine2DISCOVARplusDovetail_3081:HG2_Ill_manta_3771:HG2_Ill_scalpel_12884:HG2_Ill_svaba_17030:HG2_PB_HySA_24830:HG2_PB_SVrefine2Falcon1plusDovetail_2728:HG2_PB_SVrefine2Falcon2Bionano_6765:HG2_PB_SVrefine2PB10Xhap12_9825:HG2_PB_SVrefine2PBcRplusDovetail_2584:HG2_PB_pbsv_13615:HG3_10X_allpass_2662:HG3_Ill_GATKHCSBGrefine_9006:HG3_Ill_SVrefine2DISCOVARDovetail_9884:HG3_Ill_scalpel_13126:HG3_Ill_svaba_17164:HG3_PB_SVrefine2Falcon1Dovetail_8245:HG3_PB_SVrefine2PBcRDovetail_6455:HG3_PB_pbsv_13302:HG4_10X_allpass_2570:HG4_Ill_GATKHCSBGrefine_9413:HG4_Ill_SVrefine2DISCOVARDovetail_9747:HG4_Ill_manta_3210:HG4_Ill_scalpel_12588:HG4_Ill_svaba_17068:HG4_PB_SVrefine2Falcon1Dovetail_8303;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0970266;ClusterMaxSizeDiff=0.0970266;ClusterMaxEditDist=0.0970266;PBcalls=17;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-434;DistForward=-311;DistMin=-434;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:127660427-127660768;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=859.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:33:./.:0:0:0:0:./.:0:0:0:0:1/1:0:34:1/1:1:15:.:.:.
chr12	127777009	HG3_Ill_Krunchall_18269	TATTAATGAGTTGTCCAGTGTGGCTGCTCTGATGTGTATGGGGCTGCTCCAATGTGGCTGCTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9540:HG2_PB_assemblyticsPBcR_6132:HG2_PB_pbsv_13617:HG2_PB_HySA_24834:HG2_PB_HySA_24833:HG4_PB_SVrefine2Falcon1Dovetail_8305:HG3_PB_pbsv_13304:HG3_Ill_svaba_17168:HG3_Ill_scalpel_13129:HG3_Ill_SVrefine2DISCOVARDovetail_9886:HG3_Ill_Krunchall_18269:HG3_Ill_GATKHC_21737:HG3_Ill_GATKHCSBGrefine_9009:HG3_Ill_Cortex_891:HG3_Ill_250bpfermikitraw_17752:HG3_Ill_150bpfermikitraw_17261:HG2_PB_SVrefine2Falcon2Bionano_6767:HG2_Ill_svaba_17034:HG2_Ill_scalpel_12886:HG2_Ill_manta_3772:HG2_Ill_SpiralSDKrefine_3970:HG2_Ill_Krunchall_18620:HG2_Ill_GATKHC_21853:HG2_Ill_GATKHCSBGrefine_9129:HG2_Ill_Cortex_2029:HG2_Ill_250bpfermikitraw_18281:HG2_Ill_150bpfermikitraw_17215;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9540:HG4_PB_SVrefine2Falcon1Dovetail_8305:HG3_PB_pbsv_13304:HG3_Ill_svaba_17168:HG3_Ill_scalpel_13129:HG3_Ill_SVrefine2DISCOVARDovetail_9886:HG3_Ill_Krunchall_18269:HG3_Ill_GATKHC_21737:HG3_Ill_GATKHCSBGrefine_9009:HG3_Ill_Cortex_891:HG3_Ill_250bpfermikitraw_17752:HG3_Ill_150bpfermikitraw_17261:HG2_PB_SVrefine2Falcon2Bionano_6767:HG2_Ill_svaba_17034:HG2_Ill_scalpel_12886:HG2_Ill_manta_3772:HG2_Ill_SpiralSDKrefine_3970:HG2_Ill_Krunchall_18620:HG2_Ill_GATKHC_21853:HG2_Ill_GATKHCSBGrefine_9129:HG2_Ill_Cortex_2029:HG2_Ill_250bpfermikitraw_18281:HG2_Ill_150bpfermikitraw_17215;NumExactMatchSVs=23;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.0483871;PBcalls=7;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=672;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=94;REFWIDENED=12:127777010-127777165;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=860.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:34:./.:19:20:3:11:1|0:0:28:36:1:0/1:29:25:./.:.:.:.:.:.
chr12	127947266	HG2_Ill_breakscan11_1941	AGAAAGGTAAATCAATGACTTCAGGATGTCAGGGCAAACAGGATAGTGGATAG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_915:HG3_PB_HySA_20555:HG3_PB_assemblyticsfalcon_6320:HG2_PB_assemblyticsfalcon_6326:HG2_PB_assemblyticsPBcR_6133:HG4_PB_SVrefine2Falcon1Dovetail_8306:HG3_PB_pbsv_13305:HG3_PB_SVrefine2PBcRDovetail_6457:HG3_PB_SVrefine2Falcon1Dovetail_8247:HG3_Ill_svaba_17170:HG3_Ill_scalpel_13131:HG3_Ill_manta_3097:HG3_Ill_SVrefine2DISCOVARDovetail_9888:HG3_Ill_Krunchall_18271:HG3_Ill_GATKHC_21739:HG3_Ill_GATKHCSBGrefine_9010:HG3_Ill_Cortex_892:HG3_Ill_250bpfermikitraw_17754:HG3_Ill_150bpfermikitraw_17263:HG3_CG_vcfBeta_7391:HG3_10X_allpass_2663:HG2_PB_pbsv_13618:HG2_PB_SVrefine2PBcRplusDovetail_2586:HG2_PB_SVrefine2PB10Xhap12_9827:HG2_PB_SVrefine2Falcon2Bionano_6768:HG2_PB_SVrefine2Falcon1plusDovetail_2730:HG2_Ill_svaba_17036:HG2_Ill_scalpel_12888:HG2_Ill_manta_3773:HG2_Ill_breakscan11_1941:HG2_Ill_SpiralSDKrefine_3972:HG2_Ill_SVrefine2DISCOVARplusDovetail_3084:HG2_Ill_Krunchall_18622:HG2_Ill_GATKHC_21855:HG2_Ill_GATKHCSBGrefine_9130:HG2_Ill_Cortex_2030:HG2_Ill_250bpfermikitraw_18283:HG2_Ill_150bpfermikitraw_17217:HG2_CG_vcfBeta_7750:HG2_10X_SVrefine210Xhap12_9541:HG4_PB_assemblyticsfalcon_6224;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9541:HG2_CG_vcfBeta_7750:HG2_Ill_150bpfermikitraw_17217:HG2_Ill_250bpfermikitraw_18283:HG2_Ill_Cortex_2030:HG2_Ill_GATKHCSBGrefine_9130:HG2_Ill_GATKHC_21855:HG2_Ill_Krunchall_18622:HG2_Ill_SVrefine2DISCOVARplusDovetail_3084:HG2_Ill_SpiralSDKrefine_3972:HG2_Ill_breakscan11_1941:HG2_Ill_manta_3773:HG2_Ill_scalpel_12888:HG2_Ill_svaba_17036:HG2_PB_SVrefine2Falcon1plusDovetail_2730:HG2_PB_SVrefine2Falcon2Bionano_6768:HG2_PB_SVrefine2PB10Xhap12_9827:HG2_PB_SVrefine2PBcRplusDovetail_2586:HG2_PB_pbsv_13618:HG3_10X_allpass_2663:HG3_CG_vcfBeta_7391:HG3_Ill_150bpfermikitraw_17263:HG3_Ill_250bpfermikitraw_17754:HG3_Ill_Cortex_892:HG3_Ill_GATKHCSBGrefine_9010:HG3_Ill_GATKHC_21739:HG3_Ill_Krunchall_18271:HG3_Ill_SVrefine2DISCOVARDovetail_9888:HG3_Ill_manta_3097:HG3_Ill_scalpel_13131:HG3_Ill_svaba_17170:HG3_PB_SVrefine2Falcon1Dovetail_8247:HG3_PB_SVrefine2PBcRDovetail_6457:HG3_PB_pbsv_13305:HG4_PB_SVrefine2Falcon1Dovetail_8306;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0571429;PBcalls=14;Illcalls=23;TenXcalls=2;CGcalls=2;PBexactcalls=9;Illexactcalls=22;TenXexactcalls=2;CGexactcalls=2;HG2count=22;HG3count=17;HG4count=2;NumTechs=4;NumTechsExact=4;SVLEN=-52;DistBack=21279;DistForward=5059;DistMin=5059;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=12:127947267-127947320;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=861.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:19:./.:11:4:2:25:1|0:0:23:32:1:0/1:35:29:./.:.:.:.:.:.
chr12	128037977	HG4_10X_allpass_2573	TCTGTTTCTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTTTCGCCCAAGCTGGACTGCAGTGGCGCTATCCCGGCTCACTGCAAGCTCCGCCTCTTGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGC	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_1075:HG4_Ill_Krunchall_18943:HG3_Ill_Krunchall_18276:HG2_Ill_Krunchall_18627:HG3_Ill_Spiral_14232:HG2_Ill_Spiral_916:HG4_PB_pbsv_13625:HG3_PB_pbsv_13308:HG4_Ill_MetaSV_1215:HG3_Ill_MetaSV_1258:HG2_PB_HySA_24843:HG2_Ill_tnscope_1510:HG2_Ill_MetaSV_1143:HG4_Ill_SVrefine2DISCOVARDovetail_9750:HG4_Ill_GATKHCSBGrefine_9416:HG4_10X_allpass_2573:HG3_PB_SVrefine2PBcRDovetail_6460:HG3_PB_SVrefine2Falcon1Dovetail_8252:HG3_Ill_scalpel_13133:HG3_Ill_manta_3098:HG3_Ill_SVrefine2DISCOVARDovetail_9891:HG3_Ill_GATKHCSBGrefine_9012:HG3_10X_allpass_2664:HG2_PB_pbsv_13624:HG2_PB_assemblyticsPBcR_6141:HG2_PB_SVrefine2PBcRplusDovetail_2592:HG2_PB_SVrefine2PB10Xhap12_9830:HG2_PB_SVrefine2Falcon2Bionano_6771:HG2_PB_SVrefine2Falcon1plusDovetail_2734:HG2_Ill_scalpel_12892:HG2_Ill_manta_3774:HG2_Ill_SVrefine2DISCOVARplusDovetail_3087:HG2_Ill_GATKHCSBGrefine_9132:HG2_10X_SVrefine210Xhap12_9544:HG2_Ill_breakscan11_1942;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9544:HG2_Ill_GATKHCSBGrefine_9132:HG2_Ill_SVrefine2DISCOVARplusDovetail_3087:HG2_Ill_manta_3774:HG2_Ill_scalpel_12892:HG2_PB_SVrefine2Falcon1plusDovetail_2734:HG2_PB_SVrefine2Falcon2Bionano_6771:HG2_PB_SVrefine2PB10Xhap12_9830:HG2_PB_SVrefine2PBcRplusDovetail_2592:HG2_PB_assemblyticsPBcR_6141:HG2_PB_pbsv_13624:HG3_10X_allpass_2664:HG3_Ill_GATKHCSBGrefine_9012:HG3_Ill_SVrefine2DISCOVARDovetail_9891:HG3_Ill_manta_3098:HG3_Ill_scalpel_13133:HG3_PB_SVrefine2Falcon1Dovetail_8252:HG3_PB_SVrefine2PBcRDovetail_6460:HG4_10X_allpass_2573:HG4_Ill_GATKHCSBGrefine_9416:HG4_Ill_SVrefine2DISCOVARDovetail_9750;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00628931;ClusterMaxSizeDiff=0.00628931;ClusterMaxEditDist=0.00630915;PBcalls=11;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=7468;DistForward=-301;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=12:128037978-128038311;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=862.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:81:1/1:1:30:0:32:1/1:0:25:0:24:1/1:0:32:./.:2:16:.:1669:.
chr12	128932242	HG4_PB_SVrefine2PBcRDovetail_6805	TTCAAGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_917:HG4_Ill_Krunchall_18956:HG3_Ill_Krunchall_18292:HG2_Ill_Krunchall_18640:HG4_Ill_Spiral_1076:HG3_PB_HySA_20576:HG3_Ill_Spiral_14248:HG2_Ill_breakscan11_1944:HG4_PB_pbsv_13636:HG4_PB_assemblyticsfalcon_6243:HG4_PB_SVrefine2PBcRDovetail_6805:HG4_PB_SVrefine2Falcon1Dovetail_8314:HG4_Ill_scalpel_12605:HG4_Ill_SVrefine2DISCOVARDovetail_9753:HG4_Ill_GATKHCSBGrefine_9427:HG3_PB_pbsv_13321:HG3_PB_SVrefine2PBcRDovetail_6464:HG3_Ill_scalpel_13147:HG3_Ill_manta_3101:HG3_Ill_SVrefine2DISCOVARDovetail_9894:HG3_Ill_GATKHCSBGrefine_9022:HG2_PB_pbsv_13636:HG2_PB_SVrefine2Falcon1plusDovetail_2740:HG2_Ill_scalpel_12902:HG2_Ill_SVrefine2DISCOVARplusDovetail_3091:HG2_Ill_GATKHCSBGrefine_9139:HG2_10X_allpass_2188:HG2_10X_SVrefine210Xhap12_9549:HG4_Ill_MetaSV_1218:HG3_Ill_MetaSV_1261:HG2_Ill_tnscope_1511;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9549:HG2_10X_allpass_2188:HG2_Ill_GATKHCSBGrefine_9139:HG2_Ill_SVrefine2DISCOVARplusDovetail_3091:HG2_Ill_scalpel_12902:HG2_PB_SVrefine2Falcon1plusDovetail_2740:HG2_PB_pbsv_13636:HG3_Ill_GATKHCSBGrefine_9022:HG3_Ill_SVrefine2DISCOVARDovetail_9894:HG3_Ill_manta_3101:HG3_Ill_scalpel_13147:HG3_PB_SVrefine2PBcRDovetail_6464:HG3_PB_pbsv_13321:HG4_Ill_GATKHCSBGrefine_9427:HG4_Ill_SVrefine2DISCOVARDovetail_9753:HG4_Ill_scalpel_12605:HG4_PB_SVrefine2Falcon1Dovetail_8314:HG4_PB_SVrefine2PBcRDovetail_6805:HG4_PB_assemblyticsfalcon_6243;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00666667;ClusterMaxSizeDiff=0.00666667;ClusterMaxEditDist=0.00668896;PBcalls=9;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-299;DistBack=20287;DistForward=-300;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=12:128932243-128932554;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=863.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:36:2:1:24:1|0:0:24:39:0:0/1:24:22:0/1:18:15:.:.:.
chr12	129840688	HG3_PB_pbsv_13339	AGGGATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_918:HG2_PB_HySA_24900:HG4_10X_allpass_2574:HG2_PB_assemblyticsfalcon_6372:HG4_PB_assemblyticsfalcon_6268:HG3_PB_assemblyticsfalcon_6369:HG4_Ill_Krunchall_18972:HG3_Ill_Krunchall_18307:HG3_Ill_Spiral_14265:HG4_Ill_MetaSV_1222:HG3_PB_HySA_20608:HG3_Ill_MetaSV_1263:HG2_PB_pbsv_13656:HG2_Ill_tnscope_1512:HG2_Ill_MetaSV_1148:HG4_PB_pbsv_13655:HG4_PB_SVrefine2Falcon1Dovetail_8326:HG4_Ill_scalpel_12618:HG4_Ill_manta_3216:HG4_Ill_GATKHCSBGrefine_9441:HG3_PB_pbsv_13339:HG3_PB_SVrefine2PBcRDovetail_6471:HG3_PB_SVrefine2Falcon1Dovetail_8270:HG3_Ill_scalpel_13155:HG3_Ill_manta_3103:HG3_Ill_SVrefine2DISCOVARDovetail_9903:HG3_Ill_GATKHCSBGrefine_9029:HG3_10X_allpass_2665:HG2_PB_SVrefine2Falcon2Bionano_6785:HG2_PB_SVrefine2Falcon1plusDovetail_2751:HG2_Ill_scalpel_12921:HG2_Ill_manta_3777:HG2_Ill_GATKHCSBGrefine_9150:HG2_10X_allpass_2190:HG2_10X_SVrefine210Xhap12_9563:HG4_Ill_Spiral_1077:HG2_Ill_breakscan11_1946;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9563:HG2_10X_allpass_2190:HG2_Ill_GATKHCSBGrefine_9150:HG2_Ill_manta_3777:HG2_Ill_scalpel_12921:HG2_PB_SVrefine2Falcon1plusDovetail_2751:HG2_PB_SVrefine2Falcon2Bionano_6785:HG3_10X_allpass_2665:HG3_Ill_GATKHCSBGrefine_9029:HG3_Ill_SVrefine2DISCOVARDovetail_9903:HG3_Ill_manta_3103:HG3_Ill_scalpel_13155:HG3_PB_SVrefine2Falcon1Dovetail_8270:HG3_PB_SVrefine2PBcRDovetail_6471:HG3_PB_pbsv_13339:HG4_Ill_GATKHCSBGrefine_9441:HG4_Ill_manta_3216:HG4_Ill_scalpel_12618:HG4_PB_SVrefine2Falcon1Dovetail_8326:HG4_PB_pbsv_13655;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0981013;ClusterMaxSizeDiff=0.0981013;ClusterMaxEditDist=0.0981013;PBcalls=13;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=16749;DistForward=-282;DistMin=-282;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=12:129840689-129841010;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=865.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:20:./.:19:24:2:6:0|1:48:0:0:19:0/1:17:16:0/1:21:7:.:.:.
chr12	130060287	HG2_PB_SVrefine2PBcRplusDovetail_2609	GCAGATAGATACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG4_PB_HySA_19934:HG2_PB_assemblyticsfalcon_6378:HG4_PB_assemblyticsfalcon_6274:HG3_PB_assemblyticsfalcon_6373:HG2_PB_assemblyticsPBcR_6181:HG4_Ill_Krunchall_18976:HG3_Ill_Krunchall_18313:HG2_Ill_Krunchall_18668:HG3_Ill_Spiral_14271:HG2_Ill_Spiral_919:HG3_PB_pbsv_13345:HG2_PB_pbsv_13660:HG4_PB_pbsv_13657:HG2_PB_HySA_24908:HG3_PB_HySA_20615:HG4_Ill_MetaSV_1223:HG3_Ill_MetaSV_1266:HG2_Ill_tnscope_1513:HG2_Ill_MetaSV_1150:HG4_PB_SVrefine2PBcRDovetail_6816:HG4_PB_SVrefine2Falcon1Dovetail_8329:HG4_Ill_scalpel_12622:HG4_Ill_manta_3217:HG4_Ill_SVrefine2DISCOVARDovetail_9765:HG4_Ill_GATKHCSBGrefine_9442:HG4_10X_allpass_2575:HG3_PB_SVrefine2PBcRDovetail_6474:HG3_PB_SVrefine2Falcon1Dovetail_8272:HG3_Ill_scalpel_13161:HG3_Ill_manta_3104:HG3_Ill_SVrefine2DISCOVARDovetail_9907:HG3_Ill_GATKHCSBGrefine_9033:HG3_10X_allpass_2666:HG2_PB_SVrefine2PBcRplusDovetail_2609:HG2_PB_SVrefine2PB10Xhap12_9853:HG2_PB_SVrefine2Falcon2Bionano_6787:HG2_PB_SVrefine2Falcon1plusDovetail_2754:HG2_Ill_scalpel_12925:HG2_Ill_manta_3778:HG2_Ill_breakscan11_1948:HG2_Ill_SVrefine2DISCOVARplusDovetail_3100:HG2_Ill_GATKHCSBGrefine_9153:HG2_10X_allpass_2191:HG2_10X_SVrefine210Xhap12_9566;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9566:HG2_10X_allpass_2191:HG2_Ill_GATKHCSBGrefine_9153:HG2_Ill_SVrefine2DISCOVARplusDovetail_3100:HG2_Ill_breakscan11_1948:HG2_Ill_manta_3778:HG2_Ill_scalpel_12925:HG2_PB_SVrefine2Falcon1plusDovetail_2754:HG2_PB_SVrefine2Falcon2Bionano_6787:HG2_PB_SVrefine2PB10Xhap12_9853:HG2_PB_SVrefine2PBcRplusDovetail_2609:HG3_10X_allpass_2666:HG3_Ill_GATKHCSBGrefine_9033:HG3_Ill_SVrefine2DISCOVARDovetail_9907:HG3_Ill_manta_3104:HG3_Ill_scalpel_13161:HG3_PB_SVrefine2Falcon1Dovetail_8272:HG3_PB_SVrefine2PBcRDovetail_6474:HG4_10X_allpass_2575:HG4_Ill_GATKHCSBGrefine_9442:HG4_Ill_SVrefine2DISCOVARDovetail_9765:HG4_Ill_manta_3217:HG4_Ill_scalpel_12622:HG4_PB_SVrefine2Falcon1Dovetail_8329:HG4_PB_SVrefine2PBcRDovetail_6816;NumExactMatchSVs=25;ClusterMaxShiftDist=0.130106;ClusterMaxSizeDiff=0.130106;ClusterMaxEditDist=0.130106;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=33825;DistForward=4660;DistMin=4660;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=12:130060288-130060634;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=866.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:1:29:0:29:1/1:0:22:0:15:1/1:0:45:0/1:1:9:.:.:.
chr12	130123026	HG2_Ill_SVrefine2DISCOVARplusDovetail_3102	GTGTGATTTTTTATATATATAAACATATATAAATATATATAAATATATAAACATATATAAATATAAACATATATAAATATATAAACATATATAAATTATATATAAATATATATTTTTATATATATATAAATTCAGCATAT	TATATGCTGC	20	PASS	ClusterIDs=HG2_Ill_scalpel_12926:HG4_Ill_GATKHCSBGrefine_9443:HG3_Ill_GATKHC_21796:HG3_Ill_GATKHCSBGrefine_9034:HG2_Ill_GATKHCSBGrefine_9154:HG2_Ill_SpiralSDKrefine_4000:HG4_PB_SVrefine2PBcRDovetail_6817:HG4_Ill_manta_3218:HG4_Ill_SVrefine2DISCOVARDovetail_9766:HG3_Ill_SVrefine2DISCOVARDovetail_9909:HG2_PB_assemblyticsPBcR_6183:HG2_PB_SVrefine2PBcRplusDovetail_2611:HG2_PB_SVrefine2PB10Xhap12_9855:HG2_PB_SVrefine2Falcon2Bionano_6789:HG2_PB_SVrefine2Falcon1plusDovetail_2756:HG2_Ill_manta_3779:HG2_Ill_SVrefine2DISCOVARplusDovetail_3102:HG2_10X_SVrefine210Xhap12_9567:HG2_PB_pbsv_13662:HG4_Ill_Spiral_1078:HG3_Ill_Spiral_14272:HG2_Ill_Spiral_920:HG4_Ill_MetaSV_1224:HG2_Ill_MetaSV_1151:HG2_PB_assemblyticsfalcon_6381:HG4_Ill_svaba_17117:HG3_Ill_svaba_17219:HG2_Ill_svaba_17084:HG4_Ill_Krunchall_18977:HG3_Ill_Krunchall_18314:HG2_Ill_Krunchall_18669:HG4_PB_pbsv_13659:HG4_PB_assemblyticsfalcon_6275:HG3_PB_pbsv_13347:HG4_CG_vcfBeta_8702:HG3_CG_vcfBeta_7406:HG2_CG_vcfBeta_7763:HG4_PB_SVrefine2Falcon1Dovetail_8330:HG4_Ill_scalpel_12623:HG4_10X_allpass_2576:HG3_10X_allpass_2667:HG2_PB_HySA_24910;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9567:HG2_Ill_SVrefine2DISCOVARplusDovetail_3102:HG2_Ill_manta_3779:HG2_PB_SVrefine2Falcon1plusDovetail_2756:HG2_PB_SVrefine2Falcon2Bionano_6789:HG2_PB_SVrefine2PB10Xhap12_9855:HG2_PB_SVrefine2PBcRplusDovetail_2611:HG2_PB_assemblyticsPBcR_6183:HG3_Ill_SVrefine2DISCOVARDovetail_9909:HG4_Ill_SVrefine2DISCOVARDovetail_9766:HG4_Ill_manta_3218:HG4_PB_SVrefine2PBcRDovetail_6817;NumExactMatchSVs=12;ClusterMaxShiftDist=0.288889;ClusterMaxSizeDiff=0.288889;ClusterMaxEditDist=0.288889;PBcalls=13;Illcalls=23;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=14;NumTechs=4;NumTechsExact=3;SVLEN=-130;DistBack=5831;DistForward=29068;DistMin=5831;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=12:130123026-130123165;PctSeqSimilarity=0.9483;PctSizeSimilarity=0.9701;PctRecOverlap=0.9643;SizeDiff=-4;StartDistance=-1;EndDistance=4;GTMatch=0;TruScore=96;MatchId=867.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:1:17:3:30:1/1:0:32:1:20:1/1:0:23:./.:.:.:.:.:.
chr12	130283241	HG2_Ill_svaba_17086	GAGAGAAGGGGTGGAGGGAGATAAGACTGAGAAGGAAGTCAGGGTTCTGGCTT	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17256:HG2_PB_assemblyticsfalcon_6382:HG4_Ill_Spiral_1079:HG2_PB_HySA_24913:HG2_Ill_Spiral_921:HG3_PB_pbsv_13349:HG2_PB_pbsv_13665:HG4_PB_pbsv_13662:HG4_PB_HySA_19937:HG4_PB_assemblyticsfalcon_6276:HG4_Ill_svaba_17119:HG4_Ill_scalpel_12624:HG4_Ill_Krunchall_18979:HG4_Ill_GATKHC_21887:HG4_Ill_GATKHCSBGrefine_9445:HG4_Ill_250bpfermikitraw_18112:HG4_Ill_150bpfermikitraw_17431:HG3_PB_assemblyticsfalcon_6374:HG3_Ill_svaba_17221:HG3_Ill_scalpel_13163:HG3_Ill_Krunchall_18316:HG3_Ill_GATKHCSBGrefine_9035:HG3_Ill_250bpfermikitraw_17797:HG3_Ill_150bpfermikitraw_17308:HG2_PB_assemblyticsPBcR_6185:HG2_Ill_svaba_17086:HG2_Ill_scalpel_12927:HG2_Ill_manta_3780:HG2_Ill_Krunchall_18670:HG2_Ill_GATKHC_21910:HG2_Ill_GATKHCSBGrefine_9155:HG2_Ill_250bpfermikitraw_18327;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17256:HG4_PB_assemblyticsfalcon_6276:HG4_Ill_svaba_17119:HG4_Ill_scalpel_12624:HG4_Ill_Krunchall_18979:HG4_Ill_GATKHC_21887:HG4_Ill_GATKHCSBGrefine_9445:HG4_Ill_250bpfermikitraw_18112:HG4_Ill_150bpfermikitraw_17431:HG3_PB_assemblyticsfalcon_6374:HG3_Ill_svaba_17221:HG3_Ill_scalpel_13163:HG3_Ill_Krunchall_18316:HG3_Ill_GATKHCSBGrefine_9035:HG3_Ill_250bpfermikitraw_17797:HG3_Ill_150bpfermikitraw_17308:HG2_PB_assemblyticsPBcR_6185:HG2_Ill_svaba_17086:HG2_Ill_scalpel_12927:HG2_Ill_manta_3780:HG2_Ill_Krunchall_18670:HG2_Ill_GATKHC_21910:HG2_Ill_GATKHCSBGrefine_9155:HG2_Ill_250bpfermikitraw_18327;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0384615;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=51483;DistForward=637;DistMin=637;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=12:130283242-130283345;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=868.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:42:1/1:0:6:2:30:1/1:0:8:0:7:1/1:0:51:./.:.:.:.:.:.
chr12	130409171	HG4_Ill_svaba_17122	GGTGAGACTGCCTTTGCCCACGTGAGACCGGGCTCCTGGAAGGCACCTGTGCACGCGTGAGACTGCCTTTGCCCACGTGAGACCGGGCTCCTGGAAGTCACCTGTGCACAC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2759:HG4_Ill_Krunchall_18982:HG4_PB_HySA_19942:HG2_PB_HySA_24926:HG2_PB_pbsv_13668:HG3_PB_pbsv_13353:HG4_PB_pbsv_13666:HG3_PB_HySA_20624:HG4_PB_assemblyticsfalcon_6281:HG4_PB_SVrefine2Falcon1Dovetail_8333:HG4_Ill_svaba_17122:HG4_Ill_GATKHCSBGrefine_9446:HG3_PB_assemblyticsfalcon_6380:HG3_PB_SVrefine2Falcon1Dovetail_8275:HG3_Ill_svaba_17225:HG3_Ill_GATKHCSBGrefine_9036:HG2_Ill_svaba_17090:HG2_Ill_SpiralSDKrefine_4003:HG2_Ill_SVrefine2DISCOVARplusDovetail_3104:HG2_Ill_GATKHCSBGrefine_9156:HG2_10X_SVrefine210Xhap12_9569:HG4_Ill_Spiral_1080:HG3_Ill_Spiral_14274:HG4_PB_SVrefine2PBcRDovetail_6820:HG4_Ill_SVrefine2DISCOVARDovetail_9768:HG3_PB_SVrefine2PBcRDovetail_6475:HG2_PB_SVrefine2PBcRplusDovetail_2614:HG2_PB_SVrefine2PB10Xhap12_9861:HG2_PB_SVrefine2Falcon2Bionano_6792;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9569:HG2_Ill_GATKHCSBGrefine_9156:HG2_Ill_SVrefine2DISCOVARplusDovetail_3104:HG2_Ill_SpiralSDKrefine_4003:HG2_Ill_svaba_17090:HG3_Ill_GATKHCSBGrefine_9036:HG3_Ill_svaba_17225:HG3_PB_SVrefine2Falcon1Dovetail_8275:HG3_PB_assemblyticsfalcon_6380:HG4_Ill_GATKHCSBGrefine_9446:HG4_Ill_svaba_17122:HG4_PB_SVrefine2Falcon1Dovetail_8333:HG4_PB_assemblyticsfalcon_6281;NumExactMatchSVs=13;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.0542986;PBcalls=16;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-110;DistBack=47452;DistForward=-30;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=133;REFWIDENED=12:130409143-130409385;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=869.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:54:1/1:3:23:0:26:1/1:0:10:0:14:1/1:0:29:./.:.:.:.:.:.
chr12	130742772	HG2_Ill_250bpfermikitraw_18339	TGGCACAGTGGTAGTTCACTGAGACAGGGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3107:HG3_Ill_Krunchall_18323:HG3_Ill_GATKHC_21807:HG3_Ill_GATKHCSBGrefine_9041:HG3_Ill_250bpfermikitraw_17808:HG2_Ill_Krunchall_18681:HG2_Ill_GATKHC_21924:HG2_Ill_GATKHCSBGrefine_9161:HG2_Ill_250bpfermikitraw_18339:HG3_PB_pbsv_13360:HG2_PB_pbsv_13672:HG3_Ill_SVrefine2DISCOVARDovetail_9913:HG2_PB_SVrefine2PBcRplusDovetail_2617:HG2_PB_SVrefine2PB10Xhap12_9864;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18339:HG2_Ill_GATKHCSBGrefine_9161:HG2_Ill_GATKHC_21924:HG2_Ill_Krunchall_18681:HG3_Ill_250bpfermikitraw_17808:HG3_Ill_GATKHCSBGrefine_9041:HG3_Ill_GATKHC_21807:HG3_Ill_Krunchall_18323;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.0869565;PBcalls=4;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-59;DistBack=-79;DistForward=16202;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=179;REFWIDENED=12:130742673-130742910;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=870.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:0|1:28:4:2:26:./.:9:1:1:3:0/1:20:10:./.:.:.:.:.:.
chr12	130900153	HG4_Ill_Krunchall_18994	ATCTCTCTTCACTGATGATACGGCATCCATATAGGAAACAAGAAGTCAAATTC	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17272:HG2_PB_assemblyticsPBcR_6203:HG2_PB_pbsv_13675:HG4_PB_pbsv_13674:HG4_PB_assemblyticsfalcon_6297:HG4_Ill_Krunchall_18994:HG4_Ill_GATKHC_21906:HG4_Ill_GATKHCSBGrefine_9449:HG4_Ill_250bpfermikitraw_18125:HG4_Ill_150bpfermikitraw_17447:HG3_PB_assemblyticsfalcon_6399:HG2_PB_assemblyticsfalcon_6404:HG2_Ill_SpiralSDKrefine_4010:HG2_Ill_Krunchall_18684:HG2_Ill_GATKHC_21930:HG2_Ill_GATKHCSBGrefine_9162:HG2_Ill_250bpfermikitraw_18342;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17272:HG4_PB_assemblyticsfalcon_6297:HG4_Ill_Krunchall_18994:HG4_Ill_GATKHC_21906:HG4_Ill_GATKHCSBGrefine_9449:HG4_Ill_250bpfermikitraw_18125:HG4_Ill_150bpfermikitraw_17447:HG3_PB_assemblyticsfalcon_6399:HG2_PB_assemblyticsfalcon_6404:HG2_Ill_SpiralSDKrefine_4010:HG2_Ill_Krunchall_18684:HG2_Ill_GATKHC_21930:HG2_Ill_GATKHCSBGrefine_9162:HG2_Ill_250bpfermikitraw_18342;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0192308;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0384615;PBcalls=6;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=20757;DistForward=23485;DistMin=20757;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=155;REFWIDENED=12:130900122-130900328;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=871.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:./.:12:13:10:10:1|0:0:11:12:1:0/1:33:21:./.:.:.:.:.:.
chr12	131048546	HG4_Ill_GATKHCSBGrefine_9450	CCCTGCTGTTCCTATACAAGTCAGGCAGTCCCAGTCCCAGGGCCCTTGCACCTCTCTCTGTCCCCTCTTCCTCTTCTCCCAGGTGCCCACGTGGCTAACTCCCCCACCCTTCAGG	C	20	PASS	ClusterIDs=HG2_PB_HySA_24948:HG2_Ill_Krunchall_18688:HG4_Ill_Krunchall_18998:HG3_Ill_Krunchall_18329:HG2_Ill_Krunchall_18687:HG4_PB_HySA_19963:HG3_PB_HySA_20650:HG3_PB_pbsv_13372:HG2_PB_pbsv_13681:HG4_PB_pbsv_13680:HG4_PB_SVrefine2PBcRDovetail_6828:HG4_PB_SVrefine2Falcon1Dovetail_8346:HG4_Ill_SVrefine2DISCOVARDovetail_9771:HG4_Ill_GATKHCSBGrefine_9450:HG3_PB_SVrefine2PBcRDovetail_6482:HG3_PB_SVrefine2Falcon1Dovetail_8288:HG3_Ill_SVrefine2DISCOVARDovetail_9916:HG3_Ill_GATKHCSBGrefine_9044:HG3_10X_allpass_2670:HG2_PB_SVrefine2PBcRplusDovetail_2623:HG2_PB_SVrefine2PB10Xhap12_9872:HG2_PB_SVrefine2Falcon2Bionano_6800:HG2_PB_SVrefine2Falcon1plusDovetail_2769:HG2_Ill_SpiralSDKrefine_4014:HG2_Ill_SVrefine2DISCOVARplusDovetail_3109:HG2_Ill_GATKHCSBGrefine_9165:HG2_10X_SVrefine210Xhap12_9577;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9577:HG2_Ill_GATKHCSBGrefine_9165:HG2_Ill_SVrefine2DISCOVARplusDovetail_3109:HG2_Ill_SpiralSDKrefine_4014:HG2_PB_SVrefine2Falcon1plusDovetail_2769:HG2_PB_SVrefine2Falcon2Bionano_6800:HG2_PB_SVrefine2PB10Xhap12_9872:HG2_PB_SVrefine2PBcRplusDovetail_2623:HG3_10X_allpass_2670:HG3_Ill_GATKHCSBGrefine_9044:HG3_Ill_SVrefine2DISCOVARDovetail_9916:HG3_PB_SVrefine2Falcon1Dovetail_8288:HG3_PB_SVrefine2PBcRDovetail_6482:HG4_Ill_GATKHCSBGrefine_9450:HG4_Ill_SVrefine2DISCOVARDovetail_9771:HG4_PB_SVrefine2Falcon1Dovetail_8346:HG4_PB_SVrefine2PBcRDovetail_6828;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0442478;PBcalls=14;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-114;DistBack=23934;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=114;REFWIDENED=12:131048547-131048774;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=872.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:55:1/1:0:44:2:20:./.:0:7:0:5:1/1:0:25:./.:.:.:.:.:.
chr12	131335360	HG3_Ill_SVrefine2DISCOVARDovetail_9922	GTGTGTGTGTGCTTCTATTCAAGGGTGGAAGTGTGCGTGTATTCATGTGCGTGTGTGTGAGCATGTGTGTGCATTTGTGTGTGTGCATATGTGTGTGCACGCATGTG	A	20	PASS	ClusterIDs=HG2_Ill_svaba_17118:HG2_PB_assemblyticsPBcR_6224:HG2_PB_assemblyticsfalcon_6425:HG2_PB_SVrefine2Falcon1plusDovetail_2776:HG3_PB_SVrefine2Falcon1Dovetail_8293:HG3_Ill_SVrefine2DISCOVARDovetail_9922:HG2_PB_SVrefine2Falcon2Bionano_6805:HG2_Ill_SVrefine2DISCOVARplusDovetail_3116:HG2_10X_SVrefine210Xhap12_9581:HG2_PB_SVrefine2PBcRplusDovetail_2627:HG2_PB_SVrefine2PB10Xhap12_9878:HG4_PB_assemblyticsfalcon_6317:HG3_PB_assemblyticsfalcon_6419:HG3_Ill_Krunchall_18341:HG4_PB_SVrefine2Falcon1Dovetail_8352:HG2_PB_HySA_24967:HG2_PB_pbsv_13690:HG3_PB_pbsv_13383:HG3_Ill_GATKHC_21836:HG3_Ill_GATKHCSBGrefine_9055:HG2_Ill_GATKHC_21948:HG2_Ill_GATKHCSBGrefine_9170:HG2_Ill_SpiralSDKrefine_4018:HG3_Ill_manta_3106:HG2_PB_PB10Xdip_6775:HG2_Ill_manta_3784:HG3_Ill_svaba_17258:HG3_Ill_Krunchall_18340:HG3_10X_allpass_2672;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9581:HG2_Ill_SVrefine2DISCOVARplusDovetail_3116:HG2_PB_SVrefine2Falcon2Bionano_6805:HG3_Ill_SVrefine2DISCOVARDovetail_9922:HG3_PB_SVrefine2Falcon1Dovetail_8293;NumExactMatchSVs=5;ClusterMaxShiftDist=0.26455;ClusterMaxSizeDiff=0.26455;ClusterMaxEditDist=0.328042;PBcalls=14;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-106;DistBack=6255;DistForward=31224;DistMin=6255;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=90;REFWIDENED=12:131335270-131335461;PctSeqSimilarity=0.9316;PctSizeSimilarity=0.9434;PctRecOverlap=0.0935;SizeDiff=6;StartDistance=91;EndDistance=97;GTMatch=0;TruScore=65;MatchId=873.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:27:0|1:17:0:2:27:./.:34:1:7:16:0/1:29:16:./.:.:.:.:.:.
chr12	131366691	HG2_10X_SVrefine210Xhap12_9582	TTCTCACCTCTAGGTACTCCCGAGAGCGCCTCCTCTATCACCACAGATCCGCGTAGCCTGCATCACTGATCTCACCTCTAGGTACTCCTGAGAACTCCTCCTCCGTCTGTGGATCTGCGTGGTCTCCATCACTGATCTCACCTCTAGGTACTCCCGAGAGTGCCTCCTCCATCACCACAGATCCGCGTAGCCTGCATCACTGATCTCACCTCTAGGTACTCCTGAGAACTCCTCCTCCGTCTGTGGATCTGCGTGGTCTCCATCACTGATCTCACCTCTAGGTACTCCCGAGAGTGCCTCCTCCATCACCACAGATCCGCGTAGCCTGCATCACTGATCTCACCTCTAGGTACTCCTGAGAACTCCTCCTCCGTCTGTGGATCTGCGTGGTCTCCATCACTGATCTCACCTCTAGGTACTCCCGAGAGTGCCTCCTCCATCACCACAGATCCGCGTAGCCTGCATCACTGATCTCACCTCTAGGTACTCCTGAGAACTCCTCCTCTGTCTGTGGATCTGCGTGGTCTCCATCACTGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9582:HG4_PB_SVrefine2Falcon1Dovetail_8353:HG3_Ill_MetaSV_1274:HG3_Ill_MetaSV_1273:HG3_Ill_GATKHCSBGrefine_9056:HG3_10X_allpass_2673:HG2_PB_pbsv_13691:HG3_PB_pbsv_13385:HG3_PB_SVrefine2PBcRDovetail_6485:HG3_PB_SVrefine2Falcon1Dovetail_8294:HG3_Ill_SVrefine2DISCOVARDovetail_9923:HG2_PB_SVrefine2Falcon2Bionano_6806:HG2_PB_SVrefine2Falcon1plusDovetail_2777:HG2_Ill_SVrefine2DISCOVARplusDovetail_3117;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9582:HG3_PB_SVrefine2PBcRDovetail_6485:HG3_PB_SVrefine2Falcon1Dovetail_8294:HG3_Ill_SVrefine2DISCOVARDovetail_9923:HG2_PB_SVrefine2Falcon2Bionano_6806:HG2_PB_SVrefine2Falcon1plusDovetail_2777:HG2_Ill_SVrefine2DISCOVARplusDovetail_3117;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0916031;ClusterMaxSizeDiff=0.0916031;ClusterMaxEditDist=0.118321;PBcalls=7;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-536;DistBack=31224;DistForward=-510;DistMin=-510;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=278;REFWIDENED=12:131366692-131367505;PctSeqSimilarity=0.8973;PctSizeSimilarity=0.9926;PctRecOverlap=0.8632;SizeDiff=-4;StartDistance=-70;EndDistance=-74;GTMatch=0;TruScore=91;MatchId=874.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:15:0|1:31:0:1:18:./.:20:0:9:3:0/1:35:5:0/1:15:3:.:.:.
chr12	131522186	HG4_Ill_150bpfermikitraw_17466	GGGGCCTCACTCACTGCACCGGGTCTCACTCACTGCACTGGGTCTTACTCATTGCACTGGGTCTCACTCACTACACCAGGTCTCAGTCACTGCACTGGGTCTCACTCACTGCACCAGGATCTTACTGCATGGGGCCGCACTCACTGCACCGGGTCTCACTCACTGCACCAGGATCTTACTCACTGCAT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_13698:HG3_PB_assemblyticsfalcon_6432:HG3_PB_SVrefine2Falcon1Dovetail_8299:HG4_Ill_250bpfermikitraw_18144:HG4_Ill_150bpfermikitraw_17466:HG2_PB_pbsv_13699;NumClusterSVs=6;ExactMatchIDs=HG4_Ill_150bpfermikitraw_17466:HG4_Ill_250bpfermikitraw_18144;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0212202;ClusterMaxSizeDiff=0.0159151;ClusterMaxEditDist=0.096;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-187;DistBack=30;DistForward=-186;DistMin=-186;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1499;REFWIDENED=12:131520774-131522459;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=876.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:39:0|1:29:1:9:33:./.:1:7:23:1:./.:4:0:./.:.:.:.:.:.
chr12	131555557	HG2_Ill_GATKHCSBGrefine_9174	GGCCATGTACAAGGAGGTGGGGCTAAGTGAAAGGAGGTGGAGCCATGTGCAAGGAGGTGGGGCTAAGTGAAAGGAGGTGGA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_9889:HG2_PB_pbsv_13703:HG3_PB_pbsv_13397:HG3_PB_HySA_20676:HG3_Ill_GATKHCSBGrefine_9062:HG3_Ill_150bpfermikitraw_17344:HG2_Ill_GATKHCSBGrefine_9174;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9174:HG3_Ill_150bpfermikitraw_17344:HG3_Ill_GATKHCSBGrefine_9062:HG3_PB_HySA_20676;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0125;ClusterMaxSizeDiff=0.0124224;ClusterMaxEditDist=0.025;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-80;DistBack=3215;DistForward=76;DistMin=76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=317;REFWIDENED=12:131555552-131555948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=877.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:21:./.:7:17:21:4:./.:12:1:2:9:0/1:7:7:./.:.:.:.:.:.
chr12	131580547	HG3_Ill_250bpfermikitraw_17836	AGCCCTGCCCAGAGCAGCGGCTTAGGGTCACGGCCACCATTCCTGCCTCCCG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17290:HG2_PB_HySA_24975:HG3_PB_pbsv_13398:HG3_PB_HySA_20677:HG2_PB_assemblyticsfalcon_6437:HG3_Ill_svaba_17262:HG3_Ill_scalpel_13191:HG3_Ill_manta_3107:HG3_Ill_Krunchall_18345:HG3_Ill_GATKHC_21847:HG3_Ill_GATKHCSBGrefine_9063:HG3_Ill_250bpfermikitraw_17836:HG3_Ill_150bpfermikitraw_17345:HG2_PB_pbsv_13704:HG2_Ill_svaba_17125:HG2_Ill_scalpel_12953:HG2_Ill_manta_3786:HG2_Ill_Krunchall_18703:HG2_Ill_GATKHC_21958:HG2_Ill_GATKHCSBGrefine_9175:HG2_Ill_250bpfermikitraw_18366;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17290:HG3_Ill_svaba_17262:HG3_Ill_scalpel_13191:HG3_Ill_manta_3107:HG3_Ill_Krunchall_18345:HG3_Ill_GATKHC_21847:HG3_Ill_GATKHCSBGrefine_9063:HG3_Ill_250bpfermikitraw_17836:HG3_Ill_150bpfermikitraw_17345:HG2_PB_pbsv_13704:HG2_Ill_svaba_17125:HG2_Ill_scalpel_12953:HG2_Ill_manta_3786:HG2_Ill_Krunchall_18703:HG2_Ill_GATKHC_21958:HG2_Ill_GATKHCSBGrefine_9175:HG2_Ill_250bpfermikitraw_18366;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0582524;ClusterMaxSizeDiff=0.0582524;ClusterMaxEditDist=0.0784314;PBcalls=5;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=24766;DistForward=2062;DistMin=2062;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=51;REFWIDENED=12:131580521-131580622;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=878.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:10:./.:12:10:6:4:0|1:15:0:0:9:0/1:22:22:./.:.:.:.:.:.
chr12	131719788	HG2_Ill_SpiralSDKrefine_4031	GCTGGCCACCTGCCTGACAGCCCCTTTCTCACCCGAGCCAGGGGCTCTCTGCCCTGCTCTGCAGAAACCTCCCTGGC	G	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_9178:HG4_PB_pbsv_13704:HG2_PB_pbsv_13709:HG4_Ill_GATKHCSBGrefine_9469:HG2_Ill_SpiralSDKrefine_4031:HG2_Ill_GATKHC_21968;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9178:HG4_Ill_GATKHCSBGrefine_9469:HG2_Ill_SpiralSDKrefine_4031:HG2_Ill_GATKHC_21968;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0397351;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.0533333;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-76;DistBack=-424808;DistForward=19;DistMin=-424808;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=104;REFWIDENED=12:131719789-131719968;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=880.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:32:./.:22:10:13:14:./.:0:4:2:0:./.:1:4:./.:.:.:.:.:.
chr12	131815903	HG2_Ill_250bpfermikitraw_18375	CTACCCACCATTCATCCCCCCATTCATCTATCCATCCATCCCATCCCCCCAGCCACCCATACTTCCACCCATCCACCCACA	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3121:HG2_PB_pbsv_13716:HG2_PB_HySA_24987:HG3_PB_pbsv_13410:HG3_PB_HySA_20695:HG3_Ill_svaba_17273:HG3_Ill_scalpel_13199:HG3_Ill_manta_3109:HG3_Ill_Krunchall_18355:HG3_Ill_GATKHC_21861:HG3_Ill_GATKHCSBGrefine_9068:HG3_Ill_250bpfermikitraw_17847:HG3_Ill_150bpfermikitraw_17354:HG3_10X_allpass_2674:HG2_Ill_svaba_17139:HG2_Ill_scalpel_12960:HG2_Ill_Krunchall_18714:HG2_Ill_GATKHC_21973:HG2_Ill_250bpfermikitraw_18375:HG3_PB_SVrefine2PBcRDovetail_6496:HG3_Ill_SVrefine2DISCOVARDovetail_9928:HG2_PB_SVrefine2PBcRplusDovetail_2638;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18375:HG2_Ill_GATKHC_21973:HG2_Ill_Krunchall_18714:HG2_Ill_scalpel_12960:HG2_Ill_svaba_17139:HG3_10X_allpass_2674:HG3_Ill_150bpfermikitraw_17354:HG3_Ill_250bpfermikitraw_17847:HG3_Ill_GATKHCSBGrefine_9068:HG3_Ill_GATKHC_21861:HG3_Ill_Krunchall_18355:HG3_Ill_manta_3109:HG3_Ill_scalpel_13199:HG3_Ill_svaba_17273;NumExactMatchSVs=14;ClusterMaxShiftDist=0.116129;ClusterMaxSizeDiff=0.116129;ClusterMaxEditDist=0.116883;PBcalls=6;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-80;DistBack=-64;DistForward=-62;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=98;REFWIDENED=12:131815887-131816064;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=882.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:16:0|1:16:0:2:15:0|1:55:1:1:32:0/1:16:12:./.:.:.:.:.:.
chr12	131913213	HG2_10X_SVrefine210Xhap12_9594	GAGGCTGCTGGCCAGGACAGGGAGGTTTCTGCAGAGCAGGGCAGAGAGCGCCTGGCTCCGGTGAGAAAGGGGCTGTCAGGCCAGGCGCAGTGGCTTACACCTGTAATCCCAGCACTTTGGGAAGCCAAGACAGGTGGATCACCTGAGGTTGGGAGTTCGCGACCAGCCTGACCAACATGGAGAAACCCCCATCTCTACTAAAAATACAAAATTAGCCGGGTGTGGTGGTGTATGCCTATAATCCCAGCTACTCTGGAGGCTGAGGGAGAAGAATCGCTTGAACCTGGGAGGCAAAAGTTGCAGTGAGTCGAGATCACGCCATTGCACCCCAGCCTAGGCAACAAGAGTGAAAGTCCATCTCAAAAAAAAAAAAAAAAAAAAGAAAACACAAAAAGAAAGGGGCTGTCAGGCAGGTGGCCAGGCCAGGGAGGTTTCTGCAGAGCAGGGCAGAGAGCCCCTGGCTCGGGTGAGAAAGGGGCTGTC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9594:HG2_Ill_SpiralSDKrefine_4035:HG4_Ill_manta_3221:HG2_Ill_manta_3788:HG3_PB_HySA_20697:HG2_PB_HySA_24989:HG4_PB_pbsv_13711:HG3_PB_pbsv_13413:HG4_Ill_MetaSV_1233:HG3_Ill_MetaSV_1280:HG4_PB_SVrefine2PBcRDovetail_6839:HG4_Ill_svaba_17163:HG4_10X_allpass_2578:HG3_Ill_svaba_17275:HG3_10X_allpass_2675:HG2_PB_SVrefine2PBcRplusDovetail_2642:HG2_Ill_svaba_17141:HG2_PB_pbsv_13720:HG2_Ill_tnscope_1514:HG4_PB_SVrefine2Falcon1Dovetail_8364:HG3_PB_SVrefine2PBcRDovetail_6498:HG3_PB_SVrefine2Falcon1Dovetail_8307:HG2_PB_SVrefine2PBcRplusDovetail_2641:HG2_PB_SVrefine2PB10Xhap12_9899:HG2_PB_SVrefine2Falcon2Bionano_6815;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9594:HG4_PB_SVrefine2Falcon1Dovetail_8364:HG3_PB_SVrefine2PBcRDovetail_6498:HG3_PB_SVrefine2Falcon1Dovetail_8307:HG2_PB_SVrefine2PBcRplusDovetail_2641:HG2_PB_SVrefine2PB10Xhap12_9899:HG2_PB_SVrefine2Falcon2Bionano_6815;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00414079;ClusterMaxSizeDiff=0.00414079;ClusterMaxEditDist=0.0165289;PBcalls=13;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-482;DistBack=23873;DistForward=-425;DistMin=-425;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=80;REFWIDENED=12:131913214-131913775;PctSeqSimilarity=0.9576;PctSizeSimilarity=1;PctRecOverlap=0.8799;SizeDiff=0;StartDistance=-58;EndDistance=-58;GTMatch=0;TruScore=94;MatchId=883.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:43:1/1:1:25:0:16:./.:3:6:4:7:0/1:7:21:0/1:6:7:1130:1992:.
chr12	131928480	HG2_10X_allpass_2196	CCCAGGCTTGTGCTGAGGTCCCAGTGTCCAGGCCAGCAGGTGGCAGATCCTGGGACCACCCTAAGCCGTGGGAGCCCTCTGGCATCAGCCAATGAGGAAAGGCCCTGA	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1281:HG3_PB_HySA_20705:HG3_PB_pbsv_13416:HG3_PB_SVrefine2PBcRDovetail_6501:HG3_PB_SVrefine2Falcon1Dovetail_8309:HG3_Ill_svaba_17278:HG3_Ill_scalpel_13202:HG3_Ill_GATKHC_21865:HG3_Ill_GATKHCSBGrefine_9071:HG2_PB_pbsv_13723:HG2_Ill_svaba_17144:HG2_Ill_scalpel_12963:HG2_Ill_manta_3789:HG2_Ill_SVrefine2DISCOVARplusDovetail_3125:HG2_Ill_MetaSV_1160:HG2_Ill_GATKHC_21980:HG2_Ill_GATKHCSBGrefine_9182:HG2_10X_allpass_2196;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_2196:HG2_Ill_GATKHCSBGrefine_9182:HG2_Ill_GATKHC_21980:HG2_Ill_MetaSV_1160:HG2_Ill_SVrefine2DISCOVARplusDovetail_3125:HG2_Ill_manta_3789:HG2_Ill_scalpel_12963:HG2_Ill_svaba_17144:HG2_PB_pbsv_13723:HG3_Ill_GATKHCSBGrefine_9071:HG3_Ill_GATKHC_21865:HG3_Ill_scalpel_13202:HG3_Ill_svaba_17278:HG3_PB_SVrefine2Falcon1Dovetail_8309:HG3_PB_SVrefine2PBcRDovetail_6501:HG3_PB_pbsv_13416;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00921659;ClusterMaxSizeDiff=0.00921659;ClusterMaxEditDist=0.0183486;PBcalls=5;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-107;DistBack=7878;DistForward=12883;DistMin=7878;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=12:131928481-131928592;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=884.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:22:1|0:1:15:41:2:0|1:19:0:0:13:0/1:30:22:./.:.:.:.:1992:.
chr12	132078944	HG2_PB_SVrefine2PBcRplusDovetail_2648	AGGGCCGGGCGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGACGTGGGTGGATCACAAGGTCAGGAGTTTGTGACCAGCCTGGCCAACATAGTGAAACCCCATCTCTACTAAAAATACAAAAAAAATTAGCCAGGTGTGGTGGCGCATGCCTATAGTCCCAGCTACTCAGGAGGCCAAGGCAGGAGAACCACTTGAACCTGCGAGGCAGAGGTTTCAGTGAGCCAAGACCACGCAATTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAATTGCGAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9597:HG4_PB_assemblyticsfalcon_6354:HG4_PB_SVrefine2Falcon1Dovetail_8369:HG4_PB_SVrefine2PBcRDovetail_6842:HG4_Ill_GATKHCSBGrefine_9471:HG2_Ill_GATKHCSBGrefine_9186:HG3_PB_pbsv_13423:HG4_PB_pbsv_13719:HG2_PB_pbsv_13732:HG4_Ill_MetaSV_1237:HG3_Ill_MetaSV_1282:HG4_Ill_SVrefine2DISCOVARDovetail_9782:HG3_PB_SVrefine2Falcon1Dovetail_8313:HG3_Ill_SVrefine2DISCOVARDovetail_9932:HG2_PB_SVrefine2PBcRplusDovetail_2648:HG2_PB_SVrefine2PB10Xhap12_9909:HG2_PB_SVrefine2Falcon2Bionano_6822:HG2_Ill_SVrefine2DISCOVARplusDovetail_3128;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9597:HG4_Ill_SVrefine2DISCOVARDovetail_9782:HG3_PB_SVrefine2Falcon1Dovetail_8313:HG3_Ill_SVrefine2DISCOVARDovetail_9932:HG2_PB_SVrefine2PBcRplusDovetail_2648:HG2_PB_SVrefine2PB10Xhap12_9909:HG2_PB_SVrefine2Falcon2Bionano_6822:HG2_Ill_SVrefine2DISCOVARplusDovetail_3128;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0162602;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.185366;PBcalls=10;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-308;DistBack=3915;DistForward=-287;DistMin=-287;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=607;REFWIDENED=12:132078945-132079859;PctSeqSimilarity=0.993;PctSizeSimilarity=0.9968;PctRecOverlap=0.0806;SizeDiff=-1;StartDistance=-284;EndDistance=-285;GTMatch=0;TruScore=69;MatchId=885.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:42:1/1:2:13:0:26:0/0:9:0:10:0:0/0:23:0:0/1:8:2:.:.:.
chr12	132349664	HG3_Ill_manta_3112	GCTTCTAGGTATACACACACATACGTGCTAAGATAGCTTCTAGGTATACACACGCACATATGCACTAAGATCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9600:HG4_PB_HySA_20020:HG2_PB_HySA_25022:HG3_PB_pbsv_13433:HG2_PB_pbsv_13741:HG4_PB_pbsv_13727:HG4_PB_assemblyticsfalcon_6371:HG4_Ill_manta_3223:HG4_Ill_GATKHC_21969:HG4_Ill_GATKHCSBGrefine_9474:HG4_Ill_150bpfermikitraw_17480:HG3_PB_assemblyticsfalcon_6463:HG3_PB_HySA_20728:HG3_Ill_manta_3112:HG2_Ill_manta_3791:HG2_Ill_GATKHC_22000:HG2_Ill_GATKHCSBGrefine_9189:HG2_Ill_250bpfermikitraw_18386:HG2_Ill_150bpfermikitraw_17311:HG4_PB_SVrefine2PBcRDovetail_6846:HG4_Ill_SVrefine2DISCOVARDovetail_9786:HG3_PB_SVrefine2PBcRDovetail_6505:HG3_Ill_SVrefine2DISCOVARDovetail_9936:HG2_PB_SVrefine2PBcRplusDovetail_2652:HG2_PB_SVrefine2PB10Xhap12_9917:HG2_PB_SVrefine2Falcon2Bionano_6828:HG2_PB_SVrefine2Falcon1plusDovetail_2792:HG2_Ill_SVrefine2DISCOVARplusDovetail_3131;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17311:HG2_Ill_250bpfermikitraw_18386:HG2_Ill_GATKHCSBGrefine_9189:HG2_Ill_GATKHC_22000:HG2_Ill_manta_3791:HG3_Ill_manta_3112:HG3_PB_HySA_20728:HG3_PB_assemblyticsfalcon_6463:HG4_Ill_150bpfermikitraw_17480:HG4_Ill_GATKHCSBGrefine_9474:HG4_Ill_GATKHC_21969:HG4_Ill_manta_3223:HG4_PB_assemblyticsfalcon_6371;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0551724;PBcalls=14;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-72;DistBack=7499;DistForward=-5;DistMin=-5;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=113;REFWIDENED=12:132349621-132349805;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=886.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:48:1/1:2:25:1:6:1/1:0:12:0:5:1/1:0:27:./.:.:.:.:.:.
chr12	132548509	HG4_Ill_Krunchall_19031	ACCCCCCCGGCCCACAGCCACACAGGTACCTTGTCACCTGCCCCGGTTCAACCACTGATGACC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_13735:HG2_PB_pbsv_13749:HG4_PB_SVrefine2PBcRDovetail_6850:HG4_PB_HySA_20023:HG4_Ill_svaba_17180:HG4_Ill_SVrefine2DISCOVARDovetail_9790:HG4_Ill_Krunchall_19031:HG4_Ill_GATKHC_21971:HG4_Ill_GATKHCSBGrefine_9478:HG4_Ill_250bpfermikitraw_18160:HG4_Ill_150bpfermikitraw_17483:HG2_Ill_svaba_17163:HG2_Ill_scalpel_12974:HG2_Ill_manta_3792:HG2_Ill_SpiralSDKrefine_4048:HG2_Ill_SVrefine2DISCOVARplusDovetail_3134:HG2_Ill_Krunchall_18726:HG2_Ill_GATKHC_22002:HG2_Ill_GATKHCSBGrefine_9191:HG2_Ill_250bpfermikitraw_18389:HG2_Ill_150bpfermikitraw_17314:HG2_10X_SVrefine210Xhap12_9605:HG2_Ill_breakscan11_1958;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9605:HG2_Ill_150bpfermikitraw_17314:HG2_Ill_250bpfermikitraw_18389:HG2_Ill_GATKHCSBGrefine_9191:HG2_Ill_GATKHC_22002:HG2_Ill_Krunchall_18726:HG2_Ill_SVrefine2DISCOVARplusDovetail_3134:HG2_Ill_SpiralSDKrefine_4048:HG2_Ill_manta_3792:HG2_Ill_scalpel_12974:HG2_Ill_svaba_17163:HG4_Ill_150bpfermikitraw_17483:HG4_Ill_250bpfermikitraw_18160:HG4_Ill_GATKHCSBGrefine_9478:HG4_Ill_GATKHC_21971:HG4_Ill_Krunchall_19031:HG4_Ill_SVrefine2DISCOVARDovetail_9790:HG4_Ill_svaba_17180:HG4_PB_HySA_20023:HG4_PB_SVrefine2PBcRDovetail_6850;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0325203;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.0487805;PBcalls=4;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=8299;DistForward=24477;DistMin=8299;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=116;REFWIDENED=12:132548510-132548687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=887.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:16:./.:6:4:9:4:0|1:6:0:0:8:0/1:7:35:./.:.:.:.:.:.
chr12	133164495	HG2_Ill_Krunchall_18759	CACTCTGTGAGGGAGCACCCTCCTGGGAGCACTCTGTGAGGGAGCACCCTCCTGGGAGCACTCTGTGAGGAGGGGCACCTTCCTGGGAGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9623:HG2_PB_pbsv_13793:HG3_PB_pbsv_13491:HG4_Ill_GATKHC_22033:HG4_Ill_GATKHCSBGrefine_9496:HG3_Ill_Krunchall_18394:HG3_Ill_GATKHC_21933:HG3_Ill_GATKHCSBGrefine_9099:HG3_Ill_250bpfermikitraw_17900:HG2_Ill_SpiralSDKrefine_4072:HG2_Ill_Krunchall_18759:HG2_Ill_GATKHC_22051:HG2_Ill_GATKHCSBGrefine_9212:HG2_Ill_250bpfermikitraw_18425:HG2_PB_SVrefine2Falcon1plusDovetail_2818;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18425:HG2_Ill_GATKHCSBGrefine_9212:HG2_Ill_GATKHC_22051:HG2_Ill_Krunchall_18759:HG2_Ill_SpiralSDKrefine_4072:HG3_Ill_250bpfermikitraw_17900:HG3_Ill_GATKHCSBGrefine_9099:HG3_Ill_GATKHC_21933:HG3_Ill_Krunchall_18394:HG4_Ill_GATKHCSBGrefine_9496:HG4_Ill_GATKHC_22033;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0340909;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.181818;PBcalls=3;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=-89;DistBack=9;DistForward=-86;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=220;REFWIDENED=12:133164374-133164682;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=888.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:17:./.:20:11:4:4:./.:0:5:19:1:0/1:30:20:./.:.:.:.:.:.
chr12	133197449	HG3_Ill_SVrefine2DISCOVARDovetail_9955	AGCCTGGGACTGACCCGGGCTCTCGAGGGGCCTCTCGTGTGCCCTTGTGACCCCCTTCCCTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9624:HG4_PB_HySA_20087:HG3_PB_pbsv_13494:HG2_Ill_breakscan11_1970:HG2_PB_pbsv_13795:HG3_PB_HySA_20793:HG4_PB_pbsv_13782:HG2_PB_HySA_25117:HG4_PB_assemblyticsfalcon_6428:HG4_PB_SVrefine2PBcRDovetail_6873:HG4_Ill_svaba_17240:HG4_Ill_scalpel_12691:HG4_Ill_Krunchall_19062:HG4_Ill_GATKHC_22036:HG4_Ill_GATKHCSBGrefine_9497:HG4_Ill_250bpfermikitraw_18198:HG4_Ill_150bpfermikitraw_17518:HG3_PB_SVrefine2Falcon1Dovetail_8345:HG3_Ill_svaba_17359:HG3_Ill_SVrefine2DISCOVARDovetail_9955:HG3_Ill_Krunchall_18398:HG3_Ill_GATKHCSBGrefine_9100:HG3_Ill_250bpfermikitraw_17904:HG3_Ill_150bpfermikitraw_17402:HG2_PB_SVrefine2PBcRplusDovetail_2674:HG2_PB_SVrefine2PB10Xhap12_9944:HG2_PB_SVrefine2Falcon2Bionano_6855:HG2_Ill_svaba_17218:HG2_Ill_SpiralSDKrefine_4076:HG2_Ill_SVrefine2DISCOVARplusDovetail_3142:HG2_Ill_Krunchall_18763:HG2_Ill_GATKHCSBGrefine_9213:HG2_Ill_250bpfermikitraw_18431:HG2_Ill_150bpfermikitraw_17352;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9624:HG4_PB_assemblyticsfalcon_6428:HG4_PB_SVrefine2PBcRDovetail_6873:HG4_Ill_svaba_17240:HG4_Ill_scalpel_12691:HG4_Ill_Krunchall_19062:HG4_Ill_GATKHC_22036:HG4_Ill_GATKHCSBGrefine_9497:HG4_Ill_250bpfermikitraw_18198:HG4_Ill_150bpfermikitraw_17518:HG3_PB_SVrefine2Falcon1Dovetail_8345:HG3_Ill_svaba_17359:HG3_Ill_SVrefine2DISCOVARDovetail_9955:HG3_Ill_Krunchall_18398:HG3_Ill_GATKHCSBGrefine_9100:HG3_Ill_250bpfermikitraw_17904:HG3_Ill_150bpfermikitraw_17402:HG2_PB_SVrefine2PBcRplusDovetail_2674:HG2_PB_SVrefine2PB10Xhap12_9944:HG2_PB_SVrefine2Falcon2Bionano_6855:HG2_Ill_svaba_17218:HG2_Ill_SpiralSDKrefine_4076:HG2_Ill_SVrefine2DISCOVARplusDovetail_3142:HG2_Ill_Krunchall_18763:HG2_Ill_GATKHCSBGrefine_9213:HG2_Ill_250bpfermikitraw_18431:HG2_Ill_150bpfermikitraw_17352;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0983607;ClusterMaxEditDist=0.131148;PBcalls=12;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-61;DistBack=1710;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=63;REFWIDENED=12:133197450-133197573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=889.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:29:0|1:22:3:0:22:0|1:10:0:0:6:0/1:22:29:./.:.:.:.:.:.
chr12	133264677	HG2_PB_SVrefine2PB10Xhap12_9945	GAAGCCACGGCAAGGGGAGCGGGTCCGCAGGCGCGGGTGAAGACAGGGCGAGGGGAGCGGGTCTGCGGGGCGCGGGTGAAGACAGGGCGAGGGGAGCGGGTCTGCGGGGCGCGGGTGAAGACAGGGCGAGGGGAGCGGGTCTTGGGGGCGCGGGTGAAGACAGGGCGAGGGGAGCGGGTCTGCGGGGCGCGGGTGAAGACAGGGCCAGGGGAGCGGGTCTGCGGGGCACGGGTGAAGACAGGGCCAGGGGAGCGGGTCCTCATGGAGCGTGTGGAGACAGGGCCAAGGGAGCGAGTCTGCGGGGCGCGGGTGAAGACAGCGCCAGGGGAGCGGGTCTTGGGGGCGCGGGTA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2819:HG3_PB_pbsv_13497:HG2_PB_pbsv_13797:HG4_PB_pbsv_13783:HG4_PB_SVrefine2PBcRDovetail_6875:HG4_PB_SVrefine2Falcon1Dovetail_8399:HG3_PB_SVrefine2Falcon1Dovetail_8346:HG2_PB_SVrefine2PBcRplusDovetail_2675:HG2_PB_SVrefine2PB10Xhap12_9945:HG2_PB_SVrefine2Falcon2Bionano_6856;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2819:HG4_PB_SVrefine2PBcRDovetail_6875:HG4_PB_SVrefine2Falcon1Dovetail_8399:HG3_PB_SVrefine2Falcon1Dovetail_8346:HG2_PB_SVrefine2PBcRplusDovetail_2675:HG2_PB_SVrefine2PB10Xhap12_9945:HG2_PB_SVrefine2Falcon2Bionano_6856;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00571429;ClusterMaxSizeDiff=0.00571429;ClusterMaxEditDist=0.06;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-350;DistBack=-4850;DistForward=-340;DistMin=-4850;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=857;REFWIDENED=12:133264678-133265884;PctSeqSimilarity=0.9525;PctSizeSimilarity=0.9972;PctRecOverlap=0.4631;SizeDiff=-1;StartDistance=-188;EndDistance=-189;GTMatch=0;TruScore=80;MatchId=890.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:39:1/1:1:10:0:14:0/0:14:0:11:0:0/0:25:0:./.:19:1:1484:.:.
chr12	133451187	HG2_Ill_GATKHC_22076	AGAACAGGCGGGACTGCCCAGGACCAGCACCCAGCGCGGGGAAGCCAGGCCCCG	A	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_6450:HG2_PB_assemblyticsfalcon_6536:HG2_PB_pbsv_13821:HG4_Ill_scalpel_12698:HG4_Ill_GATKHC_22053:HG2_Ill_scalpel_13014:HG2_Ill_GATKHC_22076:HG4_PB_pbsv_13802:HG3_PB_assemblyticsfalcon_6537;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHC_22076:HG2_Ill_scalpel_13014:HG4_Ill_GATKHC_22053:HG4_Ill_scalpel_12698;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.174757;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-53;DistBack=-31;DistForward=12087;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4197;REFWIDENED=12:133441373-133450906;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=892.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:23:./.:13:8:9:12:./.:4:0:1:3:0/1:7:5:./.:.:.:.:.:.
chr13	19748086	HG4_Ill_manta_3235	CCTCGCGGGCCTCAGAGAACTCCCCCTCCTCCATGCCTTCTCCCACGTACCAGTGCACAAAGGCCCGCTTGGCATACATGAGATCGAACTTATGGTCCAGGCGAGCCCAGGCCTCCGCGATGGCCGTGGTGTTGCTCAGCATGCACACAGCCCGCTGCACCTTGGCCAGGTCTCCCCCAGGGACCACCGTGGGGGGCTGGTAGTTAATGCCCACCTGCCGGAGAAGAGGAAGAAACAGTCCATGAAGCTTATATCAAACCTGGAAATGGTGGCTGCTTTTCCTCAAAAAGAAGACACCCTGTAGGTGAACAGGAGAATTCTCAGTTCACCCCACAAATGTCACTAAGCCCTTCTCTGTGCCAGGCAGGGTGACAGTTCCAGACAACATATGTTGCCCAGGCTGGCCTCAAACTCCTGGGCCCAATCGATCCACCCACCCCAGCCTCCCAAAGTGCTAGGATTACAGTCATGAGGCAGCATGCCCAGCATTTTTTTTTTTTTTTAAGAATAAGGTATTTTCTAAAGGATTTTTGTGCCCCTTTCTTGGGTGGTAGAATTCATGTGGAAAAGGTAGGTTGAACTTAGTAATTTTATGGGCATTTTGGGGAATCTTGTAGGTGGTGTATATATTTTATTTTAACTTGGGCATTACTATAAACTGCTTCACAACATCATTCGTTCCACTGTCTCATGTAGGGTTTGATTTAAAAAAAGAATGAGTTGTTTGTGATGAAAACAGCAACAGGTGCAGTGGCTCACACCCATTATCCCAG	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_1516:HG2_PB_PB10Xdip_8543:HG4_Ill_Krunchall_19080:HG4_PB_assemblyticsfalcon_6459:HG4_Ill_MetaSV_1250:HG2_Ill_MetaSV_1176:HG4_PB_pbsv_13813:HG4_PB_SVrefine2Falcon1Dovetail_8417:HG4_Ill_manta_3235:HG4_Ill_SVrefine2DISCOVARDovetail_9810:HG4_Ill_GATKHCSBGrefine_9510:HG4_10X_allpass_2584:HG2_PB_pbsv_13832:HG2_PB_SVrefine2PB10Xhap12_9970:HG2_PB_SVrefine2Falcon2Bionano_6876:HG2_Ill_manta_3802:HG2_Ill_breakscan11_1975:HG2_Ill_SpiralSDKrefine_4096:HG2_Ill_GATKHCSBGrefine_9227:HG2_10X_SVrefine210Xhap12_9636;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9636:HG2_Ill_GATKHCSBGrefine_9227:HG2_Ill_SpiralSDKrefine_4096:HG2_Ill_breakscan11_1975:HG2_Ill_manta_3802:HG2_PB_SVrefine2Falcon2Bionano_6876:HG2_PB_SVrefine2PB10Xhap12_9970:HG2_PB_pbsv_13832:HG4_10X_allpass_2584:HG4_Ill_GATKHCSBGrefine_9510:HG4_Ill_SVrefine2DISCOVARDovetail_9810:HG4_Ill_manta_3235:HG4_PB_SVrefine2Falcon1Dovetail_8417:HG4_PB_pbsv_13813;NumExactMatchSVs=14;ClusterMaxShiftDist=0.320755;ClusterMaxSizeDiff=0.320755;ClusterMaxEditDist=0.320755;PBcalls=7;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-772;DistBack=33132;DistForward=-770;DistMin=-770;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=13:19748087-19748861;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=893.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:0|1:11:1:2:13:./.:1:11:41:0:0/1:55:14:0/1:53:15:.:.:.
chr13	21730901	HG4_PB_SVrefine2Falcon1Dovetail_8423	TAAGAATTCCACACGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAACAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1976:HG4_PB_assemblyticsfalcon_6490:HG2_PB_assemblyticsPBcR_6360:HG4_PB_HySA_20164:HG2_PB_HySA_25219:HG3_Ill_Krunchall_18435:HG2_Ill_Krunchall_18799:HG3_PB_assemblyticsfalcon_6575:HG2_PB_assemblyticsfalcon_6574:HG2_PB_pbsv_13848:HG3_PB_pbsv_13542:HG4_Ill_MetaSV_1252:HG2_Ill_tnscope_1517:HG2_Ill_MetaSV_1179:HG4_PB_pbsv_13828:HG4_PB_SVrefine2PBcRDovetail_6898:HG4_PB_SVrefine2Falcon1Dovetail_8423:HG4_Ill_svaba_17289:HG4_Ill_scalpel_12723:HG4_Ill_manta_3236:HG4_Ill_SVrefine2DISCOVARDovetail_9820:HG4_Ill_GATKHCSBGrefine_9518:HG4_10X_allpass_2585:HG3_PB_SVrefine2PBcRDovetail_6545:HG3_PB_SVrefine2Falcon1Dovetail_8377:HG3_Ill_svaba_17410:HG3_Ill_scalpel_13284:HG3_Ill_manta_3124:HG3_Ill_SVrefine2DISCOVARDovetail_9981:HG3_Ill_GATKHCSBGrefine_9123:HG3_10X_allpass_2691:HG2_PB_SVrefine2PBcRplusDovetail_2705:HG2_PB_SVrefine2PB10Xhap12_9986:HG2_PB_SVrefine2Falcon2Bionano_6882:HG2_PB_SVrefine2Falcon1plusDovetail_2850:HG2_Ill_svaba_17267:HG2_Ill_scalpel_13036:HG2_Ill_manta_3803:HG2_Ill_SVrefine2DISCOVARplusDovetail_3166:HG2_Ill_GATKHCSBGrefine_9235:HG2_10X_allpass_2201:HG2_10X_SVrefine210Xhap12_9643;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9643:HG2_10X_allpass_2201:HG2_Ill_GATKHCSBGrefine_9235:HG2_Ill_SVrefine2DISCOVARplusDovetail_3166:HG2_Ill_manta_3803:HG2_Ill_scalpel_13036:HG2_Ill_svaba_17267:HG2_PB_SVrefine2Falcon1plusDovetail_2850:HG2_PB_SVrefine2Falcon2Bionano_6882:HG2_PB_SVrefine2PB10Xhap12_9986:HG2_PB_SVrefine2PBcRplusDovetail_2705:HG3_10X_allpass_2691:HG3_Ill_GATKHCSBGrefine_9123:HG3_Ill_SVrefine2DISCOVARDovetail_9981:HG3_Ill_manta_3124:HG3_Ill_scalpel_13284:HG3_Ill_svaba_17410:HG3_PB_SVrefine2Falcon1Dovetail_8377:HG3_PB_SVrefine2PBcRDovetail_6545:HG4_10X_allpass_2585:HG4_Ill_GATKHCSBGrefine_9518:HG4_Ill_SVrefine2DISCOVARDovetail_9820:HG4_Ill_manta_3236:HG4_Ill_scalpel_12723:HG4_Ill_svaba_17289:HG4_PB_SVrefine2Falcon1Dovetail_8423:HG4_PB_SVrefine2PBcRDovetail_6898:HG4_PB_pbsv_13828;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0982567;ClusterMaxSizeDiff=0.0982567;ClusterMaxEditDist=0.0982567;PBcalls=17;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=1610;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=13:21730902-21731239;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=895.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:2:25:0:19:1/1:0:21:0:16:1/1:0:43:0/1:3:14:.:.:.
chr13	23012146	HG2_PB_SVrefine2PB10Xhap12_10000	AAATAATTAACTTCCTCTAAATTTATTTCTGCAATAATATTACTTGCAATAATAATATTTCTGC	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_18486:HG4_PB_assemblyticsfalcon_6512:HG2_PB_pbsv_13866:HG4_PB_pbsv_13845:HG2_PB_assemblyticsfalcon_6592:HG4_PB_SVrefine2PBcRDovetail_6908:HG4_Ill_SVrefine2DISCOVARDovetail_9825:HG4_Ill_250bpfermikitraw_18247:HG3_PB_SVrefine2Falcon1Dovetail_8387:HG2_PB_SVrefine2PBcRplusDovetail_2716:HG2_PB_SVrefine2PB10Xhap12_10000:HG2_PB_SVrefine2Falcon2Bionano_6890;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18486:HG4_PB_SVrefine2PBcRDovetail_6908:HG4_Ill_SVrefine2DISCOVARDovetail_9825:HG4_Ill_250bpfermikitraw_18247:HG3_PB_SVrefine2Falcon1Dovetail_8387:HG2_PB_SVrefine2PBcRplusDovetail_2716:HG2_PB_SVrefine2PB10Xhap12_10000:HG2_PB_SVrefine2Falcon2Bionano_6890;NumExactMatchSVs=8;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.031746;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-63;DistBack=1;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=155;REFWIDENED=13:23012147-23012364;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=896.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:20:0|1:35:1:2:17:./.:4:0:0:1:0/1:15:12:./.:.:.:.:.:.
chr13	23055208	HG2_Ill_manta_3808	TTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGTCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTC	T	20	PASS	ClusterIDs=HG3_PB_HySA_20877:HG2_PB_assemblyticsPBcR_6380:HG4_PB_assemblyticsfalcon_6514:HG3_PB_assemblyticsfalcon_6604:HG2_PB_assemblyticsfalcon_6594:HG2_PB_PB10Xdip_8611:HG3_Ill_Krunchall_18451:HG4_PB_SVrefine2PBcRDovetail_6909:HG4_Ill_scalpel_12735:HG4_Ill_SVrefine2DISCOVARDovetail_9827:HG4_Ill_GATKHCSBGrefine_9539:HG4_10X_allpass_2587:HG3_Ill_scalpel_13296:HG3_Ill_SVrefine2DISCOVARDovetail_9987:HG3_Ill_Krunchall_18450:HG3_Ill_GATKHCSBGrefine_9151:HG2_PB_SVrefine2PB10Xhap12_10002:HG2_PB_HySA_25246:HG2_Ill_scalpel_13049:HG2_Ill_manta_3808:HG2_Ill_SVrefine2DISCOVARplusDovetail_3168:HG2_Ill_GATKHCSBGrefine_9251:HG2_10X_SVrefine210Xhap12_9655:HG4_Ill_Spiral_1086:HG3_PB_pbsv_13561:HG4_PB_pbsv_13847:HG3_Ill_MetaSV_1310:HG4_PB_SVrefine2Falcon1Dovetail_8433:HG4_Ill_Spiral_1085:HG4_Ill_MetaSV_1260:HG4_Ill_GATKHCSBGrefine_9538:HG3_PB_SVrefine2PBcRDovetail_6557:HG3_PB_SVrefine2Falcon1Dovetail_8389:HG3_Ill_manta_3130:HG3_Ill_GATKHCSBGrefine_9150:HG3_10X_allpass_2693:HG2_PB_pbsv_13868:HG2_PB_SVrefine2PBcRplusDovetail_2717:HG2_PB_SVrefine2PB10Xhap12_10001:HG2_PB_SVrefine2Falcon2Bionano_6891:HG2_PB_SVrefine2Falcon1plusDovetail_2860:HG2_Ill_tnscope_1518:HG2_Ill_Spiral_929:HG2_Ill_MetaSV_1184:HG2_Ill_breakscan11_1977:HG3_Ill_Spiral_14393:HG3_Ill_MetaSV_1309;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9655:HG2_Ill_GATKHCSBGrefine_9251:HG2_Ill_SVrefine2DISCOVARplusDovetail_3168:HG2_Ill_manta_3808:HG2_Ill_scalpel_13049:HG2_PB_HySA_25246:HG2_PB_PB10Xdip_8611:HG4_PB_SVrefine2PBcRDovetail_6909:HG4_Ill_scalpel_12735:HG4_Ill_SVrefine2DISCOVARDovetail_9827:HG4_Ill_GATKHCSBGrefine_9539:HG4_10X_allpass_2587:HG3_Ill_scalpel_13296:HG3_Ill_SVrefine2DISCOVARDovetail_9987:HG3_Ill_Krunchall_18450:HG3_Ill_GATKHCSBGrefine_9151:HG2_PB_SVrefine2PB10Xhap12_10002;NumExactMatchSVs=17;ClusterMaxShiftDist=0.116883;ClusterMaxSizeDiff=0.116883;ClusterMaxEditDist=0.116883;PBcalls=19;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=16;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=1764;DistForward=29350;DistMin=1764;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=13:23055209-23055526;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=897.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:1:14:0:10:1/1:0:22:0:32:1/1:0:35:./.:2:18:.:.:.
chr13	23474294	HG4_PB_pbsv_13853	TTAGCTAGATACAGAGTGTGGACACAAAGGTTCTCTAAGTCCCCACCAGAG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17423:HG4_PB_HySA_20193:HG2_PB_HySA_25252:HG2_PB_assemblyticsfalcon_6602:HG4_PB_assemblyticsfalcon_6522:HG4_PB_pbsv_13853:HG4_Ill_svaba_17323:HG4_Ill_scalpel_12740:HG4_Ill_Krunchall_19124:HG4_Ill_GATKHC_22119:HG4_Ill_GATKHCSBGrefine_9542:HG4_Ill_250bpfermikitraw_18258:HG4_Ill_150bpfermikitraw_17585:HG4_CG_vcfBeta_8774:HG2_PB_assemblyticsPBcR_6389:HG2_Ill_svaba_17296:HG2_Ill_Krunchall_18817:HG2_Ill_GATKHC_22140:HG2_Ill_GATKHCSBGrefine_9253:HG2_Ill_250bpfermikitraw_18493;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17423:HG4_PB_pbsv_13853:HG4_Ill_svaba_17323:HG4_Ill_scalpel_12740:HG4_Ill_Krunchall_19124:HG4_Ill_GATKHC_22119:HG4_Ill_GATKHCSBGrefine_9542:HG4_Ill_250bpfermikitraw_18258:HG4_Ill_150bpfermikitraw_17585:HG4_CG_vcfBeta_8774:HG2_PB_assemblyticsPBcR_6389:HG2_Ill_svaba_17296:HG2_Ill_Krunchall_18817:HG2_Ill_GATKHC_22140:HG2_Ill_GATKHCSBGrefine_9253:HG2_Ill_250bpfermikitraw_18493;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.038835;PBcalls=6;Illcalls=13;TenXcalls=0;CGcalls=1;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=1;HG2count=9;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=5110;DistForward=2150;DistMin=2150;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=49;REFWIDENED=13:23474264-23474362;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=898.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:34:1|0:3:25:22:5:./.:25:2:0:3:0/1:27:17:./.:.:.:.:.:.
chr13	24057640	HG4_PB_pbsv_13858	TCAGCTTGCAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9663:HG2_PB_assemblyticsPBcR_6395:HG4_PB_assemblyticsfalcon_6533:HG3_PB_assemblyticsfalcon_6623:HG2_PB_assemblyticsfalcon_6610:HG2_Ill_Krunchall_18824:HG2_PB_HySA_25259:HG3_PB_pbsv_13571:HG4_Ill_MetaSV_1263:HG3_Ill_MetaSV_1312:HG2_Ill_tnscope_1519:HG2_Ill_MetaSV_1187:HG4_PB_pbsv_13858:HG4_PB_SVrefine2PBcRDovetail_6914:HG4_PB_SVrefine2Falcon1Dovetail_8443:HG4_Ill_scalpel_12749:HG4_Ill_manta_3241:HG4_Ill_SVrefine2DISCOVARDovetail_9834:HG4_Ill_GATKHCSBGrefine_9545:HG4_10X_allpass_2589:HG3_PB_SVrefine2PBcRDovetail_6565:HG3_PB_SVrefine2Falcon1Dovetail_8398:HG3_Ill_scalpel_13307:HG3_Ill_manta_3131:HG3_Ill_SVrefine2DISCOVARDovetail_9992:HG3_Ill_GATKHCSBGrefine_9155:HG3_10X_allpass_2694:HG2_PB_pbsv_13875:HG2_PB_SVrefine2PBcRplusDovetail_2725:HG2_PB_SVrefine2PB10Xhap12_10011:HG2_PB_SVrefine2Falcon2Bionano_6897:HG2_PB_SVrefine2Falcon1plusDovetail_2869:HG2_Ill_scalpel_13058:HG2_Ill_manta_3810:HG2_Ill_breakscan11_1978:HG2_Ill_SVrefine2DISCOVARplusDovetail_3175:HG2_Ill_GATKHCSBGrefine_9256:HG2_10X_allpass_2203;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9663:HG4_PB_pbsv_13858:HG4_PB_SVrefine2PBcRDovetail_6914:HG4_PB_SVrefine2Falcon1Dovetail_8443:HG4_Ill_scalpel_12749:HG4_Ill_manta_3241:HG4_Ill_SVrefine2DISCOVARDovetail_9834:HG4_Ill_GATKHCSBGrefine_9545:HG4_10X_allpass_2589:HG3_PB_SVrefine2PBcRDovetail_6565:HG3_PB_SVrefine2Falcon1Dovetail_8398:HG3_Ill_scalpel_13307:HG3_Ill_manta_3131:HG3_Ill_SVrefine2DISCOVARDovetail_9992:HG3_Ill_GATKHCSBGrefine_9155:HG3_10X_allpass_2694:HG2_PB_pbsv_13875:HG2_PB_SVrefine2PBcRplusDovetail_2725:HG2_PB_SVrefine2PB10Xhap12_10011:HG2_PB_SVrefine2Falcon2Bionano_6897:HG2_PB_SVrefine2Falcon1plusDovetail_2869:HG2_Ill_scalpel_13058:HG2_Ill_manta_3810:HG2_Ill_breakscan11_1978:HG2_Ill_SVrefine2DISCOVARplusDovetail_3175:HG2_Ill_GATKHCSBGrefine_9256:HG2_10X_allpass_2203;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.0952381;PBcalls=16;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=88398;DistForward=40927;DistMin=40927;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=13:24057641-24057988;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=899.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:50:1/1:0:23:2:35:1/1:0:24:0:19:1/1:0:39:./.:2:10:.:.:.
chr13	24710954	HG3_Ill_manta_3132	ATGTTCTTTATTTTATTTATTTATTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_6628:HG2_PB_HySA_25269:HG3_Ill_Krunchall_18467:HG2_Ill_Krunchall_18828:HG3_Ill_Spiral_14404:HG3_PB_pbsv_13575:HG2_Ill_breakscan11_1979:HG2_Ill_tnscope_1520:HG2_Ill_MetaSV_1191:HG4_PB_SVrefine2Falcon1Dovetail_8447:HG3_PB_SVrefine2Falcon1Dovetail_8402:HG3_Ill_manta_3132:HG3_Ill_SVrefine2DISCOVARDovetail_9995:HG3_Ill_GATKHCSBGrefine_9158:HG3_10X_allpass_2695:HG2_PB_pbsv_13879:HG2_PB_SVrefine2Falcon2Bionano_6899:HG2_PB_SVrefine2Falcon1plusDovetail_2872:HG2_Ill_GATKHCSBGrefine_9261:HG2_10X_allpass_2204:HG2_10X_SVrefine210Xhap12_9665:HG4_PB_assemblyticsfalcon_6540;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9665:HG2_10X_allpass_2204:HG2_Ill_GATKHCSBGrefine_9261:HG2_PB_SVrefine2Falcon1plusDovetail_2872:HG2_PB_SVrefine2Falcon2Bionano_6899:HG2_PB_pbsv_13879:HG3_10X_allpass_2695:HG3_Ill_GATKHCSBGrefine_9158:HG3_Ill_SVrefine2DISCOVARDovetail_9995:HG3_Ill_manta_3132:HG3_PB_SVrefine2Falcon1Dovetail_8402:HG4_PB_SVrefine2Falcon1Dovetail_8447;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00953895;ClusterMaxSizeDiff=0.00953895;ClusterMaxEditDist=0.00955414;PBcalls=9;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=22456;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=13:24710955-24711281;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=900.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:24:0|1:28:3:1:22:1|0:0:29:40:0:0/1:46:12:0/1:24:5:.:.:0.965863
chr13	25645186	HG3_Ill_GATKHCSBGrefine_9167	CAAAATCTTGGGCGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTACAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1980:HG2_PB_HySA_25294:HG4_Ill_Krunchall_19149:HG2_Ill_Krunchall_18850:HG2_PB_SVrefine2PB10Xhap12_10025:HG2_PB_assemblyticsPBcR_6420:HG2_PB_assemblyticsfalcon_6636:HG3_PB_pbsv_13586:HG2_PB_PB10Xdip_8651:HG4_PB_pbsv_13870:HG2_Ill_tnscope_1521:HG2_Ill_MetaSV_1194:HG4_Ill_SVrefine2DISCOVARDovetail_9845:HG4_Ill_MetaSV_1269:HG4_Ill_GATKHCSBGrefine_9553:HG3_Ill_SVrefine2DISCOVARDovetail_10001:HG3_Ill_MetaSV_1317:HG3_Ill_GATKHCSBGrefine_9167:HG3_10X_allpass_2697:HG2_PB_pbsv_13889:HG2_PB_SVrefine2PBcRplusDovetail_2733:HG2_PB_SVrefine2PB10Xhap12_10024:HG2_PB_SVrefine2Falcon2Bionano_6904:HG2_PB_SVrefine2Falcon1plusDovetail_2877:HG2_Ill_manta_3818:HG2_Ill_SVrefine2DISCOVARplusDovetail_3185:HG2_Ill_GATKHCSBGrefine_9265:HG2_10X_allpass_2205:HG2_10X_SVrefine210Xhap12_9670;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9670:HG2_10X_allpass_2205:HG2_Ill_GATKHCSBGrefine_9265:HG2_Ill_SVrefine2DISCOVARplusDovetail_3185:HG2_Ill_manta_3818:HG2_PB_SVrefine2Falcon1plusDovetail_2877:HG2_PB_SVrefine2Falcon2Bionano_6904:HG2_PB_SVrefine2PB10Xhap12_10024:HG2_PB_SVrefine2PBcRplusDovetail_2733:HG2_PB_pbsv_13889:HG3_10X_allpass_2697:HG3_Ill_GATKHCSBGrefine_9167:HG3_Ill_MetaSV_1317:HG3_Ill_SVrefine2DISCOVARDovetail_10001:HG4_Ill_GATKHCSBGrefine_9553:HG4_Ill_MetaSV_1269:HG4_Ill_SVrefine2DISCOVARDovetail_9845;NumExactMatchSVs=17;ClusterMaxShiftDist=0.092504;ClusterMaxSizeDiff=0.092504;ClusterMaxEditDist=0.092504;PBcalls=12;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=20578;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=13:25645187-25645520;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=901.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:41:1|0:3:36:18:1:1|0:0:32:35:1:0/1:21:17:0/1:21:7:.:.:.
chr13	25689550	HG4_Ill_scalpel_12768	TCCCCCAACACACACACACACACACACACTCACACACACAAACTCAGAGACAC	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_18529:HG2_PB_HySA_25295:HG2_PB_pbsv_13890:HG4_PB_pbsv_13871:HG4_Ill_svaba_17347:HG4_Ill_scalpel_12768:HG4_Ill_GATKHC_22154:HG4_Ill_GATKHCSBGrefine_9554:HG4_Ill_250bpfermikitraw_18284:HG2_Ill_svaba_17322:HG2_Ill_Krunchall_18851:HG2_Ill_GATKHCSBGrefine_9266;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18529:HG4_PB_pbsv_13871:HG4_Ill_svaba_17347:HG4_Ill_scalpel_12768:HG4_Ill_GATKHC_22154:HG4_Ill_GATKHCSBGrefine_9554:HG4_Ill_250bpfermikitraw_18284:HG2_Ill_svaba_17322:HG2_Ill_Krunchall_18851:HG2_Ill_GATKHCSBGrefine_9266;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.0769231;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=17235;DistForward=-18;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=28;REFWIDENED=13:25689549-25689631;PctSeqSimilarity=0.9521;PctSizeSimilarity=0.8814;PctRecOverlap=0.4;SizeDiff=-7;StartDistance=36;EndDistance=29;GTMatch=0;TruScore=74;MatchId=902.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:24:0|1:38:2:0:22:./.:83:3:3:21:./.:2:6:./.:.:.:.:.:.
chr13	25721017	HG2_Ill_SVrefine2DISCOVARplusDovetail_3186	AAAAAATTAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1195:HG4_PB_assemblyticsfalcon_6563:HG3_PB_assemblyticsfalcon_6654:HG2_PB_assemblyticsPBcR_6421:HG2_PB_assemblyticsfalcon_6638:HG4_Ill_Krunchall_19150:HG3_PB_pbsv_13587:HG3_Ill_Krunchall_18493:HG2_Ill_Krunchall_18853:HG4_PB_HySA_20226:HG3_Ill_Spiral_14422:HG2_PB_HySA_25297:HG3_PB_HySA_20924:HG4_PB_pbsv_13872:HG4_PB_SVrefine2PBcRDovetail_6919:HG4_PB_SVrefine2Falcon1Dovetail_8453:HG4_Ill_svaba_17348:HG4_Ill_scalpel_12769:HG4_Ill_manta_3247:HG4_Ill_SVrefine2DISCOVARDovetail_9846:HG4_Ill_GATKHCSBGrefine_9555:HG4_10X_allpass_2590:HG3_PB_SVrefine2Falcon1Dovetail_8409:HG3_Ill_svaba_17474:HG3_Ill_scalpel_13332:HG3_Ill_manta_3135:HG3_Ill_SVrefine2DISCOVARDovetail_10002:HG3_Ill_GATKHCSBGrefine_9168:HG3_10X_allpass_2698:HG2_PB_pbsv_13891:HG2_PB_SVrefine2PBcRplusDovetail_2734:HG2_PB_SVrefine2PB10Xhap12_10026:HG2_PB_SVrefine2Falcon2Bionano_6905:HG2_PB_SVrefine2Falcon1plusDovetail_2878:HG2_Ill_svaba_17323:HG2_Ill_scalpel_13080:HG2_Ill_manta_3819:HG2_Ill_SVrefine2DISCOVARplusDovetail_3186:HG2_Ill_GATKHCSBGrefine_9267:HG2_10X_allpass_2206:HG2_10X_SVrefine210Xhap12_9671:HG4_Ill_MetaSV_1270:HG3_Ill_MetaSV_1318:HG2_Ill_tnscope_1522;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9671:HG2_10X_allpass_2206:HG2_Ill_GATKHCSBGrefine_9267:HG2_Ill_SVrefine2DISCOVARplusDovetail_3186:HG2_Ill_manta_3819:HG2_Ill_scalpel_13080:HG2_Ill_svaba_17323:HG2_PB_SVrefine2Falcon1plusDovetail_2878:HG2_PB_SVrefine2Falcon2Bionano_6905:HG2_PB_SVrefine2PB10Xhap12_10026:HG2_PB_SVrefine2PBcRplusDovetail_2734:HG2_PB_pbsv_13891:HG3_10X_allpass_2698:HG3_Ill_GATKHCSBGrefine_9168:HG3_Ill_SVrefine2DISCOVARDovetail_10002:HG3_Ill_manta_3135:HG3_Ill_scalpel_13332:HG3_Ill_svaba_17474:HG3_PB_SVrefine2Falcon1Dovetail_8409:HG4_10X_allpass_2590:HG4_Ill_GATKHCSBGrefine_9555:HG4_Ill_SVrefine2DISCOVARDovetail_9846:HG4_Ill_manta_3247:HG4_Ill_scalpel_12769:HG4_Ill_svaba_17348:HG4_PB_SVrefine2Falcon1Dovetail_8453:HG4_PB_SVrefine2PBcRDovetail_6919:HG4_PB_pbsv_13872;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0603175;ClusterMaxSizeDiff=0.0603175;ClusterMaxEditDist=0.0603175;PBcalls=17;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=7012;DistForward=-308;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=13:25721018-25721346;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=903.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:7:31:2:25:1/1:0:27:0:25:1/1:0:39:0/1:4:17:.:.:.
chr13	27050041	HG4_PB_SVrefine2PBcRDovetail_6925	GGCAAGGATGGGAACAAGGCTGTGGCCACACCCCAGGGAGGGGGCAGGGCTTGGGTGAGGCTGAGGCTTCGGGGGTGGAAGGAGGTGGTCCCTGCTAGACAGACTGGCAGACAAAGCAACTACGGCTGATTCCTCACGTAAGCACCTGGATGCTGAACTGAATGACAGCAGGCGCTGACTTTAGAGGAAGAGTGGGATAGCACATTTGCTGAAATACTTAGGTATCCAATAGAATTCCAGGGGCGTTTAGACAGTGAAGTAATGCTGAGAGAGACAGAGCTATTCTCCATTGGCTGCTCACCACATTGACCGGTCCTTCTGCCAGGCCTGGTTAGGTCACTGTATTTCCTGTGCAGGAGCACTGGGTCACCGCGTCCCTGCTGACCTCGGCAGGGTCAGAAGCGGGGTCCGCAGGGCGGCGGTCAGGGGCGGGGACTGTCCTCAGGGTAGGTTAGAACCTAGGGAGGGCAGCGGGCAGGCTGGGCTGAGCCCTCTTCCGTCACACAGGAAGCTGCAGGGCTTTCCTGCGGCATTCATGCTTTTTTATTCAAAGTCAGAGCTAGGGAGCTATTTGTCACTCTGCTTCCGGAGGCAACTTTATTCAGAAATCAACCGCTGCCTGGCTCCAGGGCCAGTGTCAGGAGCCAGCGGGGGTTTGTTCTGGCCAACAGCCCTCTCCTCCATCAGAGTCATCCCCACATCCAGGCGGGAGTTGCTAGAATTATCTGTTCCTGTTTCCTTCAGAGTCTGCACAGAATGCTTTGGATTCCCGAGATCTGGCTTCCTCTGTGTGTTGTCACTGACTCCAGCCCAGCTGCTCGCAGCACGGCCTGGGGAGACAATTCCCCTTTGCATTCAAAGACCAGGTAAAACAAGCCATCCATAGAGCTCACCAAGGCATGAAGTTAAACAGAAGTACGGAGTCAAGTAGAAACCACCACTTTCTGAGAATGCAGGTGGTACGGGATGGGGACACTTCACTGGCTGATCTGTTAGTGCCTGTGCCAGAAATCACAGGCTTCAGGGAGGGGCCCCTCAGAGAAGCCCCTTGGGAAGTTATACTCTCATTCCAAAGCTTTTCCCACACTCAGAGCACACTTGGAACTCCCTTCTCTTGGCAAAGGCCTTTAGAGTCCATTTAAGCTACATCGGAAACCCCATGTCATTTTTTAGAAAAAATTTTTTTATGTATAATCTACTAGATTTGACCCTGAATTTTTTTTTCTATTTTCTAAGCCCATTAAAACACACACACACACTCACACACACACTCACCCACACTCTCACACACTCACTCACACACACACACTCACACACTCACACACACACAGACACTCGACCCATGATGGCATGAAAGCAATGACTCCAAGGCCATTCATCCTGAAATGAGGGCATCATTCCCATTGGATATGTAATCTTTTATTGAAAGATTATTCCATACTTATATATAGAAAAGTGCACCAGCCGTAAGTGTACAGGTTGAAGAATATTTAGGAACTGAACACCCTGGTGCACACAGCACCCGGATGGAGACACAGAACAATAGTAATGCCTGGATGCCCTCACGGATTACCCTGGATCACTCACCTTCAAGTATGTGTGAAGTCTTTAGCCCACACCATCCAGAATAATCACCACTCTGACCAAGGTTGGGAAAGGTTGAGGAGCCTGGGGTGCACAGTGTAAGGAGGCCTCCCCTCTCAAGGTCAAGCACGTCTAGCCCCTTACATTTTGTTCTAGGTGCTTCACAGGCCTCACCCATAACTGACTTCTAGCAGCACAAAACAGTTCTGCCTGTTTTTGAGCTCCGTATAAATGGAATCTTCCAACATGCACTTTTTTGGGTCTGACATCTTTTGCTCAACATTATGGCTGAGATTCATGTTTTTGCTTGGAGTTGTAGTTTCTTCAGTCTTGTTGCTGTACAGCAGGTTCTCAAACTTTAGCCCGCATCAAAGTCACCTGCAGGGCTGGCTAAAACACAAGATTGCTGGCCCCACCCCCAGAGTTTCTGACCCAGGAGGTCTGAGATAAAATTCCAGAGTATGCTAACAGATTGTCCTGCGATACTGATGCCGCACTTTATTATTTATTTATTTATTTATTTATTTGAGATAGAGTCTCACTCTGTCGCCCAGGCTGGAGT	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_1523:HG2_10X_allpass_2207:HG3_10X_allpass_2699:HG2_PB_HySA_25332:HG3_PB_pbsv_13601:HG4_10X_allpass_2591:HG2_Ill_Krunchall_18871:HG3_PB_HySA_20941:HG4_PB_pbsv_13884:HG4_PB_SVrefine2PBcRDovetail_6925:HG4_PB_SVrefine2Falcon1Dovetail_8461:HG4_PB_HySA_20250:HG4_Ill_MetaSV_1272:HG3_PB_SVrefine2Falcon1Dovetail_8417:HG3_Ill_SVrefine2DISCOVARDovetail_10009:HG3_Ill_MetaSV_1321:HG3_Ill_GATKHCSBGrefine_9183:HG2_PB_pbsv_13904:HG2_PB_SVrefine2PBcRplusDovetail_2740:HG2_PB_SVrefine2PB10Xhap12_10034:HG2_PB_SVrefine2Falcon2Bionano_6914:HG2_PB_SVrefine2Falcon1plusDovetail_2886:HG2_Ill_MetaSV_1198:HG2_Ill_GATKHCSBGrefine_9276:HG2_10X_SVrefine210Xhap12_9676:HG2_PB_HySA_25331;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9676:HG2_Ill_GATKHCSBGrefine_9276:HG2_Ill_MetaSV_1198:HG2_PB_SVrefine2Falcon1plusDovetail_2886:HG2_PB_SVrefine2Falcon2Bionano_6914:HG2_PB_SVrefine2PB10Xhap12_10034:HG2_PB_SVrefine2PBcRplusDovetail_2740:HG2_PB_pbsv_13904:HG3_Ill_GATKHCSBGrefine_9183:HG3_Ill_MetaSV_1321:HG3_Ill_SVrefine2DISCOVARDovetail_10009:HG3_PB_SVrefine2Falcon1Dovetail_8417:HG4_Ill_MetaSV_1272:HG4_PB_HySA_20250:HG4_PB_SVrefine2Falcon1Dovetail_8461:HG4_PB_SVrefine2PBcRDovetail_6925:HG4_PB_pbsv_13884;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0157699;ClusterMaxSizeDiff=0.0157699;ClusterMaxEditDist=0.0157699;PBcalls=14;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2145;DistBack=507;DistForward=71655;DistMin=507;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=13:27050042-27052189;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=904.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:101:1/1:0:23:0:34:1/1:0:10:0:27:1/1:0:24:./.:5:75:.:.:.
chr13	28839856	HG3_Ill_SVrefine2DISCOVARDovetail_10019	GTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCGGTTTTTTTT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10045:HG2_PB_assemblyticsPBcR_6453:HG2_PB_assemblyticsfalcon_6681:HG3_10X_allpass_2704:HG2_PB_SVrefine2PBcRplusDovetail_2750:HG3_Ill_Spiral_14448:HG3_Ill_MetaSV_1326:HG2_Ill_tnscope_1524:HG2_Ill_Spiral_930:HG3_Ill_scalpel_13356:HG3_Ill_manta_3143:HG3_Ill_SVrefine2DISCOVARDovetail_10019:HG3_Ill_GATKHCSBGrefine_9190:HG2_PB_pbsv_13920:HG2_PB_SVrefine2Falcon1plusDovetail_2896:HG2_Ill_manta_3826:HG2_Ill_SpiralSDKrefine_4162:HG2_Ill_MetaSV_1203:HG2_Ill_GATKHCSBGrefine_9284:HG2_10X_allpass_2208:HG2_10X_SVrefine210Xhap12_9683:HG3_PB_pbsv_13620:HG3_Ill_Krunchall_18535:HG2_PB_SVrefine2PB10Xhap12_10046:HG2_Ill_breakscan11_1981;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9683:HG2_10X_allpass_2208:HG2_Ill_GATKHCSBGrefine_9284:HG2_Ill_MetaSV_1203:HG2_Ill_SpiralSDKrefine_4162:HG2_Ill_manta_3826:HG2_PB_SVrefine2Falcon1plusDovetail_2896:HG2_PB_pbsv_13920:HG3_Ill_GATKHCSBGrefine_9190:HG3_Ill_SVrefine2DISCOVARDovetail_10019:HG3_Ill_manta_3143:HG3_Ill_scalpel_13356;NumExactMatchSVs=12;ClusterMaxShiftDist=0.213068;ClusterMaxSizeDiff=0.213068;ClusterMaxEditDist=0.213068;PBcalls=8;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=8031;DistForward=-298;DistMin=-298;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=13:28839857-28840191;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=905.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:31:./.:3:15:17:7:0|1:40:0:0:30:0/1:22:26:0/1:30:8:.:.:.
chr13	29722594	HG3_PB_pbsv_13625	GCTGTGTTTGGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGGGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10048:HG4_PB_assemblyticsfalcon_6610:HG2_PB_HySA_25369:HG2_PB_PB10Xdip_8714:HG2_PB_PB10Xdip_8715:HG3_PB_assemblyticsfalcon_6706:HG2_PB_pbsv_13925:HG2_Ill_breakscan11_1982:HG4_PB_HySA_20280:HG4_PB_SVrefine2Falcon1Dovetail_8476:HG4_PB_pbsv_13903:HG3_PB_HySA_20965:HG4_Ill_MetaSV_1278:HG2_Ill_tnscope_1525:HG4_Ill_manta_3254:HG4_Ill_GATKHCSBGrefine_9580:HG4_10X_allpass_2594:HG3_PB_pbsv_13625:HG3_Ill_SVrefine2DISCOVARDovetail_10022:HG3_Ill_GATKHCSBGrefine_9194:HG3_10X_allpass_2705:HG2_PB_SVrefine2PB10Xhap12_10049:HG2_Ill_scalpel_13101:HG2_Ill_manta_3827:HG2_Ill_GATKHCSBGrefine_9287:HG2_10X_allpass_2209:HG2_10X_SVrefine210Xhap12_9686:HG4_Ill_MetaSV_1277:HG4_Ill_Krunchall_19195:HG2_Ill_Krunchall_18885:HG2_PB_assemblyticsPBcR_6458:HG2_PB_SVrefine2PBcRplusDovetail_2753;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9686:HG2_10X_allpass_2209:HG2_Ill_GATKHCSBGrefine_9287:HG2_Ill_manta_3827:HG2_Ill_scalpel_13101:HG2_PB_PB10Xdip_8715:HG4_Ill_manta_3254:HG4_Ill_GATKHCSBGrefine_9580:HG4_10X_allpass_2594:HG3_PB_pbsv_13625:HG3_Ill_SVrefine2DISCOVARDovetail_10022:HG3_Ill_GATKHCSBGrefine_9194:HG3_10X_allpass_2705:HG2_PB_SVrefine2PB10Xhap12_10049;NumExactMatchSVs=14;ClusterMaxShiftDist=0.253595;ClusterMaxSizeDiff=0.253595;ClusterMaxEditDist=0.253595;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=21;DistForward=20110;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=13:29722595-29722930;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=906.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:30:0|1:47:2:2:27:0|1:50:0:0:24:0/1:22:24:0/1:29:10:.:.:.
chr13	29891562	HG2_Ill_scalpel_13104	TCTCTCTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2898:HG4_PB_assemblyticsfalcon_6612:HG4_Ill_Krunchall_19197:HG2_Ill_Krunchall_18888:HG2_PB_assemblyticsPBcR_6460:HG3_PB_pbsv_13626:HG2_PB_assemblyticsfalcon_6690:HG3_PB_HySA_20967:HG4_PB_pbsv_13904:HG2_PB_pbsv_13926:HG4_Ill_MetaSV_1280:HG3_Ill_MetaSV_1330:HG2_Ill_tnscope_1526:HG4_PB_SVrefine2PBcRDovetail_6939:HG4_PB_SVrefine2Falcon1Dovetail_8478:HG4_Ill_scalpel_12802:HG4_Ill_manta_3255:HG4_Ill_SVrefine2DISCOVARDovetail_9869:HG4_Ill_GATKHCSBGrefine_9581:HG4_10X_allpass_2595:HG3_PB_assemblyticsfalcon_6708:HG3_PB_SVrefine2Falcon1Dovetail_8432:HG3_Ill_scalpel_13363:HG3_Ill_SVrefine2DISCOVARDovetail_10023:HG3_Ill_GATKHCSBGrefine_9195:HG2_PB_SVrefine2PBcRplusDovetail_2754:HG2_PB_SVrefine2PB10Xhap12_10050:HG2_PB_SVrefine2Falcon2Bionano_6929:HG2_Ill_scalpel_13104:HG2_Ill_manta_3828:HG2_Ill_SVrefine2DISCOVARplusDovetail_3208:HG2_Ill_GATKHCSBGrefine_9288:HG2_10X_allpass_2210:HG2_10X_SVrefine210Xhap12_9688;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9688:HG2_10X_allpass_2210:HG2_Ill_GATKHCSBGrefine_9288:HG2_Ill_SVrefine2DISCOVARplusDovetail_3208:HG2_Ill_manta_3828:HG2_Ill_scalpel_13104:HG2_PB_SVrefine2Falcon2Bionano_6929:HG2_PB_SVrefine2PB10Xhap12_10050:HG2_PB_SVrefine2PBcRplusDovetail_2754:HG3_Ill_GATKHCSBGrefine_9195:HG3_Ill_SVrefine2DISCOVARDovetail_10023:HG3_Ill_scalpel_13363:HG3_PB_SVrefine2Falcon1Dovetail_8432:HG3_PB_assemblyticsfalcon_6708:HG4_10X_allpass_2595:HG4_Ill_GATKHCSBGrefine_9581:HG4_Ill_SVrefine2DISCOVARDovetail_9869:HG4_Ill_manta_3255:HG4_Ill_scalpel_12802:HG4_PB_SVrefine2Falcon1Dovetail_8478:HG4_PB_SVrefine2PBcRDovetail_6939;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0711974;ClusterMaxSizeDiff=0.0711974;ClusterMaxEditDist=0.0711974;PBcalls=15;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=-31088;DistForward=-289;DistMin=-31088;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=13:29891563-29891883;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=907.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:36:1|0:0:11:34:9:1|0:1:26:36:0:0/1:36:21:0/1:19:9:.:.:.
chr13	29954757	HG3_Ill_manta_3145	TAAAAGACATCAGCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1983:HG2_10X_allpass_2212:HG2_PB_HySA_25375:HG4_PB_assemblyticsfalcon_6614:HG4_Ill_Krunchall_19200:HG3_Ill_Krunchall_18545:HG2_Ill_Krunchall_18892:HG2_PB_PB10Xdip_8719:HG4_PB_pbsv_13906:HG2_PB_SVrefine2PB10Xhap12_10053:HG2_PB_pbsv_13929:HG4_PB_HySA_20283:HG3_PB_pbsv_13628:HG4_Ill_MetaSV_1282:HG3_Ill_MetaSV_1332:HG2_Ill_tnscope_1527:HG4_PB_SVrefine2PBcRDovetail_6941:HG4_PB_SVrefine2Falcon1Dovetail_8479:HG4_Ill_manta_3257:HG4_Ill_GATKHCSBGrefine_9585:HG4_10X_allpass_2597:HG3_PB_SVrefine2Falcon1Dovetail_8434:HG3_Ill_scalpel_13364:HG3_Ill_manta_3145:HG3_Ill_SVrefine2DISCOVARDovetail_10025:HG3_Ill_GATKHCSBGrefine_9198:HG3_10X_allpass_2706:HG2_PB_SVrefine2PBcRplusDovetail_2756:HG2_PB_SVrefine2PB10Xhap12_10052:HG2_PB_SVrefine2Falcon2Bionano_6930:HG2_PB_SVrefine2Falcon1plusDovetail_2900:HG2_Ill_manta_3831:HG2_Ill_SpiralSDKrefine_4168:HG2_Ill_SVrefine2DISCOVARplusDovetail_3210:HG2_Ill_MetaSV_1208:HG2_10X_SVrefine210Xhap12_9690;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9690:HG2_Ill_MetaSV_1208:HG2_Ill_SVrefine2DISCOVARplusDovetail_3210:HG2_Ill_SpiralSDKrefine_4168:HG2_Ill_manta_3831:HG2_PB_SVrefine2Falcon1plusDovetail_2900:HG2_PB_SVrefine2Falcon2Bionano_6930:HG2_PB_SVrefine2PB10Xhap12_10052:HG2_PB_SVrefine2PBcRplusDovetail_2756:HG3_10X_allpass_2706:HG3_Ill_GATKHCSBGrefine_9198:HG3_Ill_SVrefine2DISCOVARDovetail_10025:HG3_Ill_manta_3145:HG3_Ill_scalpel_13364:HG3_PB_SVrefine2Falcon1Dovetail_8434:HG4_10X_allpass_2597:HG4_Ill_GATKHCSBGrefine_9585:HG4_Ill_manta_3257:HG4_PB_SVrefine2Falcon1Dovetail_8479:HG4_PB_SVrefine2PBcRDovetail_6941;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0632911;ClusterMaxSizeDiff=0.0632911;ClusterMaxEditDist=0.0632911;PBcalls=15;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=-833;DistForward=-312;DistMin=-833;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=13:29954758-29955095;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=908.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:37:0|1:24:5:1:38:0|1:32:0:0:25:0/1:33:13:0/1:24:5:.:.:.
chr13	30215823	HG2_PB_pbsv_13933	TGAGAACTACTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCACCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGCTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATCTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCGGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTCTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTGTCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAATTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGAGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTCCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1209:HG4_10X_allpass_2598:HG2_PB_assemblyticsPBcR_6464:HG4_PB_assemblyticsfalcon_6620:HG2_PB_assemblyticsfalcon_6695:HG2_10X_allpass_2214:HG2_Ill_Krunchall_18902:HG2_Ill_Krunchall_18901:HG2_Ill_tnscope_1528:HG4_PB_pbsv_13909:HG4_PB_SVrefine2PBcRDovetail_6943:HG4_PB_SVrefine2Falcon1Dovetail_8481:HG4_Ill_SVrefine2DISCOVARDovetail_9871:HG4_Ill_MetaSV_1283:HG4_Ill_GATKHCSBGrefine_9589:HG3_PB_assemblyticsfalcon_6713:HG3_PB_SVrefine2Falcon1Dovetail_8437:HG2_PB_pbsv_13933:HG2_PB_SVrefine2PBcRplusDovetail_2759:HG2_PB_SVrefine2PB10Xhap12_10057:HG2_PB_SVrefine2Falcon2Bionano_6933:HG2_PB_SVrefine2Falcon1plusDovetail_2903:HG2_Ill_breakscan11_1984:HG2_Ill_SpiralSDKrefine_4170;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_MetaSV_1209:HG4_PB_pbsv_13909:HG4_PB_SVrefine2PBcRDovetail_6943:HG4_PB_SVrefine2Falcon1Dovetail_8481:HG4_Ill_SVrefine2DISCOVARDovetail_9871:HG4_Ill_MetaSV_1283:HG4_Ill_GATKHCSBGrefine_9589:HG3_PB_assemblyticsfalcon_6713:HG3_PB_SVrefine2Falcon1Dovetail_8437:HG2_PB_pbsv_13933:HG2_PB_SVrefine2PBcRplusDovetail_2759:HG2_PB_SVrefine2PB10Xhap12_10057:HG2_PB_SVrefine2Falcon2Bionano_6933:HG2_PB_SVrefine2Falcon1plusDovetail_2903:HG2_Ill_breakscan11_1984:HG2_Ill_SpiralSDKrefine_4170;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0044884;ClusterMaxSizeDiff=0.0044884;ClusterMaxEditDist=0.0044884;PBcalls=13;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-6021;DistBack=82172;DistForward=-6009;DistMin=-6009;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=13:30215824-30221858;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=910.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:66:0|1:49:0:2:34:1|0:0:29:43:0:0/1:30:27:0/1:391:187:5862:.:.
chr13	30409220	HG4_Ill_150bpfermikitraw_17663	AATATAAATATATATATATATATAAATATATATATATATATAAATATATATATAT	A	20	PASS	ClusterIDs=HG4_Ill_150bpfermikitraw_17662:HG4_PB_assemblyticsfalcon_6624:HG4_PB_HySA_20293:HG4_PB_pbsv_13912:HG4_Ill_GATKHC_22224:HG4_Ill_GATKHCSBGrefine_9591:HG4_Ill_250bpfermikitraw_18341:HG4_Ill_150bpfermikitraw_17663:HG2_Ill_SpiralSDKrefine_4175:HG4_Ill_Krunchall_19217:HG2_Ill_GATKHC_22245:HG2_Ill_GATKHCSBGrefine_9295:HG2_Ill_150bpfermikitraw_17508;NumClusterSVs=13;ExactMatchIDs=HG4_Ill_150bpfermikitraw_17663:HG4_Ill_250bpfermikitraw_18341:HG4_Ill_GATKHCSBGrefine_9591:HG4_Ill_GATKHC_22224;NumExactMatchSVs=4;ClusterMaxShiftDist=0.244898;ClusterMaxSizeDiff=0.244898;ClusterMaxEditDist=0.244898;PBcalls=3;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=12288;DistForward=-31;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=56;REFWIDENED=13:30409213-30409322;PctSeqSimilarity=0.9216;PctSizeSimilarity=0.8519;PctRecOverlap=0.8545;SizeDiff=8;StartDistance=0;EndDistance=8;GTMatch=0;TruScore=87;MatchId=911.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:0|1:26:3:2:20:./.:3:5:5:0:0/1:24:4:./.:.:.:.:.:.
chr13	30844119	HG2_PB_SVrefine2PB10Xhap12_10059	GAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCTCTCTGCCCAGCCAGCCGCCTCGTCCGGGAAGGAGGTGGGGGGTC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9695:HG3_Ill_MetaSV_1334:HG2_PB_PB10Xdip_8722:HG3_PB_pbsv_13632:HG3_Ill_MetaSV_1333:HG3_Ill_GATKHCSBGrefine_9204:HG2_PB_pbsv_13937:HG2_Ill_GATKHCSBGrefine_9296:HG2_PB_SVrefine2PB10Xhap12_10060:HG2_PB_SVrefine2PBcRplusDovetail_2761:HG2_PB_SVrefine2PB10Xhap12_10059:HG2_PB_SVrefine2Falcon1plusDovetail_2905;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9695:HG2_PB_SVrefine2PBcRplusDovetail_2761:HG2_PB_SVrefine2PB10Xhap12_10059:HG2_PB_SVrefine2Falcon1plusDovetail_2905;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0221729;ClusterMaxSizeDiff=0.0221729;ClusterMaxEditDist=0.0443459;PBcalls=7;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-226;DistBack=173;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=208;REFWIDENED=13:30844120-30844553;PctSeqSimilarity=0.9793;PctSizeSimilarity=0.9956;PctRecOverlap=0.793;SizeDiff=1;StartDistance=-47;EndDistance=-46;GTMatch=0;TruScore=92;MatchId=912.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:33:./.:20:7:0:19:./.:24:0:2:2:0/1:24:10:./.:.:.:.:.:.
chr13	30970141	HG2_Ill_SpiralSDKrefine_4181	CATCCAGTCTCCTTTTCAAATAAAGATTTAGGATTGATGTTAGAGAAAAAAACAGATCCAGTCTCCTTTTCAAATAAAGATTTAGGATTGATGTTAGAGAAAAAAACAG	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8483:HG2_PB_HySA_25395:HG3_PB_HySA_20992:HG4_Ill_svaba_17400:HG4_Ill_GATKHCSBGrefine_9592:HG4_Ill_250bpfermikitraw_18348:HG3_Ill_svaba_17532:HG3_Ill_GATKHCSBGrefine_9206:HG3_Ill_250bpfermikitraw_18072:HG3_Ill_150bpfermikitraw_17559:HG2_Ill_svaba_17371:HG2_Ill_SpiralSDKrefine_4181:HG2_Ill_GATKHCSBGrefine_9297:HG2_Ill_250bpfermikitraw_18594:HG2_Ill_150bpfermikitraw_17517:HG3_PB_SVrefine2Falcon1Dovetail_8439:HG3_PB_assemblyticsfalcon_6722:HG4_PB_pbsv_13913:HG2_PB_pbsv_13938:HG3_PB_pbsv_13634:HG4_PB_SVrefine2PBcRDovetail_6946:HG4_Ill_SVrefine2DISCOVARDovetail_9875:HG3_PB_SVrefine2PBcRDovetail_6575:HG3_Ill_SVrefine2DISCOVARDovetail_10028:HG2_PB_SVrefine2PBcRplusDovetail_2762:HG2_PB_SVrefine2PB10Xhap12_10061:HG2_PB_SVrefine2Falcon2Bionano_6936:HG2_PB_SVrefine2Falcon1plusDovetail_2906:HG2_Ill_SVrefine2DISCOVARplusDovetail_3213:HG2_10X_SVrefine210Xhap12_9696;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17517:HG2_Ill_250bpfermikitraw_18594:HG2_Ill_GATKHCSBGrefine_9297:HG2_Ill_SpiralSDKrefine_4181:HG2_Ill_svaba_17371:HG3_Ill_150bpfermikitraw_17559:HG3_Ill_250bpfermikitraw_18072:HG3_Ill_GATKHCSBGrefine_9206:HG3_Ill_svaba_17532:HG4_Ill_250bpfermikitraw_18348:HG4_Ill_GATKHCSBGrefine_9592:HG4_Ill_svaba_17400;NumExactMatchSVs=12;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0730594;PBcalls=14;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-108;DistBack=7213;DistForward=-69;DistMin=-69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=161;REFWIDENED=13:30970076-30970344;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=913.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:46:1/1:0:25:1:19:./.:0:4:0:7:1/1:0:50:./.:.:.:.:.:.
chr13	31175585	HG2_Ill_breakscan11_1985	TAAAAATGAGGGTTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_931:HG4_10X_allpass_2599:HG2_10X_allpass_2215:HG4_PB_pbsv_13914:HG4_Ill_MetaSV_1284:HG2_Ill_tnscope_1529:HG2_Ill_MetaSV_1210:HG4_Ill_manta_3261:HG4_Ill_SVrefine2DISCOVARDovetail_9876:HG4_Ill_GATKHCSBGrefine_9593:HG2_PB_pbsv_13939:HG2_Ill_manta_3836:HG2_Ill_breakscan11_1985:HG2_Ill_SVrefine2DISCOVARplusDovetail_3214:HG2_Ill_GATKHCSBGrefine_9298:HG2_10X_SVrefine210Xhap12_9697;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9697:HG2_Ill_GATKHCSBGrefine_9298:HG2_Ill_SVrefine2DISCOVARplusDovetail_3214:HG2_Ill_breakscan11_1985:HG2_Ill_manta_3836:HG2_PB_pbsv_13939:HG4_Ill_GATKHCSBGrefine_9593:HG4_Ill_SVrefine2DISCOVARDovetail_9876:HG4_Ill_manta_3261;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0643185;ClusterMaxSizeDiff=0.0643185;ClusterMaxEditDist=0.0643185;PBcalls=2;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=62180;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=13:31175586-31175935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=914.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:21:0|1:29:0:0:19:1|0:0:37:40:0:0/1:25:16:0/1:32:12:.:.:.
chr13	31963615	HG4_CG_vcfBeta_8826	ACCAATTTCATAAAGAAGACTGGAATTCATTAAAGAGGGATTGTAGCCATCCAGGGCTGAAGCCAGCATTTT	A	20	PASS	ClusterIDs=HG2_PB_HySA_25411:HG2_PB_assemblyticsfalcon_6712:HG3_PB_HySA_21007:HG2_PB_HySA_25412:HG4_PB_assemblyticsfalcon_6637:HG3_PB_assemblyticsfalcon_6734:HG4_PB_pbsv_13918:HG4_PB_SVrefine2PBcRDovetail_6948:HG4_Ill_svaba_17404:HG4_Ill_manta_3263:HG4_Ill_GATKHC_22237:HG4_Ill_GATKHCSBGrefine_9595:HG4_Ill_150bpfermikitraw_17677:HG4_CG_vcfBeta_8826:HG4_10X_allpass_2600:HG3_PB_pbsv_13640:HG3_Ill_svaba_17539:HG3_Ill_manta_3147:HG3_Ill_GATKHC_22149:HG3_Ill_GATKHCSBGrefine_9210:HG3_CG_vcfBeta_7508:HG2_PB_pbsv_13943:HG2_PB_assemblyticsPBcR_6490:HG2_Ill_svaba_17377:HG2_Ill_manta_3838:HG2_Ill_GATKHC_22265:HG2_Ill_GATKHCSBGrefine_9302:HG2_Ill_150bpfermikitraw_17528:HG2_CG_vcfBeta_7869:HG2_10X_allpass_2216:HG2_Ill_breakscan11_1986;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_2216:HG2_CG_vcfBeta_7869:HG2_Ill_150bpfermikitraw_17528:HG2_Ill_GATKHCSBGrefine_9302:HG2_Ill_GATKHC_22265:HG2_Ill_manta_3838:HG2_Ill_svaba_17377:HG2_PB_assemblyticsPBcR_6490:HG2_PB_pbsv_13943:HG3_CG_vcfBeta_7508:HG3_Ill_GATKHCSBGrefine_9210:HG3_Ill_GATKHC_22149:HG3_Ill_manta_3147:HG3_Ill_svaba_17539:HG3_PB_pbsv_13640:HG4_10X_allpass_2600:HG4_CG_vcfBeta_8826:HG4_Ill_150bpfermikitraw_17677:HG4_Ill_GATKHCSBGrefine_9595:HG4_Ill_GATKHC_22237:HG4_Ill_manta_3263:HG4_Ill_svaba_17404:HG4_PB_SVrefine2PBcRDovetail_6948:HG4_PB_pbsv_13918;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0413793;ClusterMaxSizeDiff=0.0413793;ClusterMaxEditDist=0.0684932;PBcalls=11;Illcalls=15;TenXcalls=2;CGcalls=3;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=3;HG2count=13;HG3count=8;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-71;DistBack=22;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=13:31963616-31963688;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=915.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:44:./.:3:6:0:4:1/1:0:12:0:10:1/1:0:20:./.:.:.:.:.:.
chr13	32176765	HG2_PB_HySA_25414	ATAGTAATATTTATATTATAACACATAAATATAATATAGTAATATTTATATTATAACACATAAATATAATATAGTAATATTTATATTATAACACATAAATATAACAT	A	10	PASS	ClusterIDs=HG4_PB_HySA_20314:HG4_PB_HySA_20315:HG3_PB_HySA_21010:HG2_PB_HySA_25414;NumClusterSVs=4;ExactMatchIDs=HG2_PB_HySA_25414:HG3_PB_HySA_21010;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00930233;ClusterMaxSizeDiff=0.00930233;ClusterMaxEditDist=0.027907;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-106;DistBack=-105;DistForward=-43;DistMin=-105;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=13:32176764-32176872;PctSeqSimilarity=0.7222;PctSizeSimilarity=0.726;PctRecOverlap=0.7143;SizeDiff=-40;StartDistance=42;EndDistance=2;GTMatch=0;TruScore=72;MatchId=916.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:61:./.:0:0:0:0:./.:0:0:0:0:./.:0:5:./.:.:.:.:.:.
chr13	32532644	HG2_PB_SVrefine2Falcon2Bionano_6939	TGGCTGGGGTAGAAGTGGAGAACGAGACAGGGAGAGAGAGATTGAGGCTTTTAAGAGTTGCTGGCTACTCCTTCTGTTGCACTTCTCCTTGAAAGGCCTCCCTAGGGCAGTCTACCTGTTATTGCTCTAAAATTAAGTTAGGATCTAGCTCTGTTGTAGTTGGGCAGCAGAGGTAGACATTATGCCAATATATGCCATTTTGATGTTCAGATAGAAGTCCAGCATTGTGAGTTACTTTCATTATGTGTGAAAATACGGTGTGTAGAAGTAGGTAAAAATTTGCTCAAAAATTCACTACATTCTTTCAGGAGCTATAGCAAAGCAGCAATTTATGATTTTGTTTCTTTTAAATGTGGAAGTTTGGGATTCACAAATGCTATGAAATAGATAAATACATAAAAGTTGTACACAAAATGCACATTAACCAGCTGACTAGAATTTTGCCCCAACCCCGAACTGGAATGTTTATGAACCCCTAATCTCTTGTACTCTGCAATTCTAACCTCAGTGTGCCACATTGCTGCATGTTACTCATTGCTGAATGGAGTGGCACATAACATCTATTTAAATGCTGCATAATAGAACTATGGTATCGTTTAGGACTTTATATAAAAGTTATAACATTTGAAATGCCATGAATTTCATCCCAGTGGCAACATTTCTGTAGTCAGCTTTTAAGGAATATGATTAGATGAGATGTATACTCCACTTTTAAAATATTTTAATTATCAGAATTATAGAATTACATGTTTTTTTTTTAAGTCACATAGATTCTTCAAGCTTGGATCTTACCAAGCCTGGACATCAATGAGCTATTTCAGTTTGTTGTTGTTGTTGTTTTAATCAATGATAGGGCATCTTGGAAAGCCTATGGCATTTCCTCAAAAGTTTCCTTCTTATTTTCCCTCCTAATTATTAATCTTACATAAGATGTGCCAAGATTGATTCTTGGGGATTTACTATTTTTTGTTTATAGATCAAGCTTCAAAAAGTGCATGGTGGTTATGCTGTTGAAGAACTTAGACAAGAAAATAACTCACTTGGCAGTGAGCACAGTGGAGAATCAAAGAATCAATGAATTGTGGATCTGAAAGAAATAGAGAACATCAAATTCAGTGCACTCATTTTACAGATGAAAAACTGTAGACCTACAAAGACAGTTGACATGGAGGGTCTTCTGATTCCCGTAATGTTCTATAGCATCATCCTTCATGAGATCATCACAGAAACCTAGTTTAAGAACCTCTGGGTCATTTTTGTATGCATGAAAAGTGAGAAGAAAATGATACCCACACCTTCCTGTGGGTCCAGAGGCCAGCAATCCATGCATCAACCTGTGTTTATTAAATACCCACATGCCCTCTGCTGTGCACCAGATATTGGTGGGCAGGGCTGGTGTGTGAATTAAAAAATACACGTCAGTCAGACTTGGTGAGACACTTACTCACAGGTGAGCCTTAGCCTAGTGCACAGCATCAAGACCTCAACTGGTTTTATTTTGCAGTCCATCCTTAAGAGAGAAAAAGTCTTTCTTTGATGAAAATAGCCATTAGGTGCAAAAGAGGAGATTTTAGTTCAAGGTATTATAGCTCTAGCTGAAGGAAACACACAGGAAATGTGATTCTCCTCAGAGATGTGATCCAGGAGAAAACCAGGATCCTAAACATTCCTTTTTGAGGAATATGTCTCAGGAAATATTCCTTTTGAAAGGTAAGGGTCTACCAAATGGTCACCATCCTCACAGACAGATTTGTTACAACTCCCATTTCACAATGAGGAAACTGAGGCGTATGGAAAACAATCTGTTAAAAGTTAAGAGAACAAATTTGAAACTGGGTGAAAAATTGCAACTTCTTAGCTTTAAGTTCTCCTTTACCAAATATTCTCTGAAGTTTATTCCATTCTCATGTTAAAAAAAATTGTAACCAAAAGCAGCATTACTACTATGTATCTTAGTAGTTGAACAATAAAGTGCATCATTTTTCCCACACAGATAATAACCAAATTCTTATTTAAAAATCAATTAAGAAACCTCTAATTAAAGGGGCAGTGAATGGAAACAGTAGACTTGGCCTAAATATGCTTGTGGAGCAGCTGGGGGCCTGCATCTGTCATGGGTAAAATACTTTACTCATTTGTGGGAAGTGGGTCCCCTTTTGTAGGTTGTCAGGGCTCAATTTAGTCCCTGAAAAAGATGTCACCCTATTATTTTATGTGGTCCTCAGCTTAAAAAGGTGTCTAACTGTAAGTACTACACCTCTAAAGAGAGATGTTAGAAATAATCACTGCCTTGGAAAAAAGATTCTAATAAAGCAAATTTTAAAAACAAATACAAAGCCAAATTTCTCCTAAGCACAAGAGTTTGAATATGTAGAAGGTCATTTTATTTGTTTTTTGTTTGTTTTGTTGAGTAGTAGAAGGAAAAGATCATATGACTTCATATAACCCACATGGCATCTGGGAGCACTTTGCTCTTAAAATTTAAGTAGATTGGTCAAGCTTCCATTCCATACATAGTCTCAGGCTCAATCCAAAGATTTTTATAACTTTTCAGGGACATGGGTCCTTGTGCTTAAGTTTCTGCTCCTGTGAATGTTTTGTTTGTTTGTTTTTCCTTTTTTGGTCGTTTATGATTTTTTTTCCCGGATATTGTCTCTATTCTGTACTGTGTGTGGGTTCAGAAATGAAGTTCACCTTCTTGCCTTGATTTCTGCAAATAAAAACTCAACCCAATCATAAAAGCCTCTGTATGTGTAGTGGATTCTACTGGATGTCTGGAGAGACAAAAAGAATTCCAGAAGTAGATATTCATTCAGCACAAACAACTTTGATTTAACAGCAGAGGGCCCTATTCTTGAAAAGCCCTCTCAACCACCCTCCCCTTCAAGATTTCTTAAAGCGTGTTCTACCAGTATTCAACCTCTGGCCATCAAGATGGCTCTTTTTTCCTTCTCTTCCATCTTTCCTTTCAAATTTCTTTTTACCGTAATGTCCCCAGAATTTTATTTTCTTCTTCCTCGATCATATAGAGCATATCTGCTCTTTCCAGCCTTACTCCCAAGCCCTTCTTCAGACCTATCATTGCACATCTGAAACCAATCAAGGTACCCCTCATAAACCAAAGGACCACCTGAGACTGCTCCCTTTCAGCCCATGGTTATCATAAGGGTCCATGAGAACCATCTGCAAATCTTGTTAAAATTTCAGATGCTGGTTTATCAGGTTTGGGGTTGGCTGAGGAATATGTATTTTTAATAGTCATGATTTGATTCTGTTAGAGGGATCTTCAGCTTATTCTTTGAGAAACTCTGTAGTCTAACAAGACTCATCCTCTGCAGAAGGCAGTTGGAGTCCAGAGAGCATTTTTTTTCTCTTTTGCATATACGGTAAACCTTAGTCCAAACAGAGCCCTGGAAAATATGCATGGTGATTGGAGTTAAACATCCCTGCATCATCCTGTTGCTCAGACTATCTTGCTTACCAAAGACCATGCTCTTTTTAGAAGCTCTATCAATTAAAACTTTGGTACACTCATCAGGAAGGGATAAGACTCATATTTCTCCTGTCTTAAGAGGATTTCTCTTGCTATGAAAATGGTTGTATTCACTTGAACAGGCACAGTGACTGGTTTAGTTAAGGGACATAGAAGATAAAACTTGTTTGGGGACAACCCAGGGAACTTAAAGGATCAGTGAGCAAGACTATCTTGTTAGCAGAGTTCCACATTATTTTATATTTTTATTAATTAATAGTTTGTGATAAGTTCATATGTTAATTTGAGTAACAGCATTACTCAATGAGGGTAGCTTTTTTGCAACTCATTTTACATTATAGCTTTGTCCTTTTTGAAAAATAATTTAATTACAAAAAATCAGAAAACTGATTGGAGGGTGATTATCAAGTGTATAAATTATCCATACTATGAATTGATAAATTTCCTTATATAAATGCATTTTAAATTATTCATTTTATAAAAATGAGATGTATGCTTTTCAGGAAGATATCAACTCTTGTGTGAATAAATAAATATCTGTATTATTCCTAAGAAGTTTACTGTCTTTTGGCACGCTTCTGTCATTTTTCTGTCTTAATTATTAGCTCTTTGAATAGAAGAGCTAAGTTTTCTATTTTTTTCCTTTCCTTGACACATGTATCCAGTGATTTCTGCCCACAGTGGGTGCTCAGGAAATGCTGATGCCCTTCATCCCCATAACTATGTTATATTCTCCTCCTTCCATTAATAGTGTGTGAATCTAACTAATAATTTACCCACCTAGTGTGCCCTGGATTCTTCCTTCTAAAGTGGGATAAAAATAATAGCTGATCCCAGGAATGTCTACCATCCTAAAGACTCCTGGAGTCTAGAACTGCATTCCTGAAGTAGTTCTCTCATCCACTGGTAGATTTTCTGTAACAATCTGCCTTTTTTTTTTTTTTTTCTTGATAGTGTCTCTCTCATGTTTAAGCTTTTTTCGGAATCAAGCCCACATTCTTCAGCACGGCATTGAAGACTCAGGAGCCCTCCCAGTCTGGCCCCATGCACAGATGGAAGGCTTTCTTTCCTGGTCCTTATCCTTCTCTGCACAATACTCCAGTCACACCACACCATGGACTGCTCTCTGACCCTCATGGCATTCCAGTGGCGTTATGCTCTCATACAGCCTTCCTCATTTGCCCACCTTGCTTGTCTCTGACTCATATTCTATTCCAAGGCTAAGCTCAAATGTCATCATATCTCTCAAACTGTCCCTCACACTCCCACCCCCACATGATTTAGTTGTATTCTGCCTTTTGTTCCACAGGTCTTTGTACATCATGGTATTATGGTGTTTAAGTCTGTACATATGTATTTGTATTGCCATCCCCAACCCAGGCTCCAAGCCTTCTGAAGGTAGAAAACTGTATCACATAAATGAAGAATGAATGAATGAATGAATGAGTAAATATTTAGCCTATCTGTCTGAACTGCCTGCTCTGTCTTAGCCATTGGAAACATGCTTAGAACTAAATCATTTTCTAAGAAACAATAGTCTTCCTTAGTATTAATTTTATATTATTTTTCTCTCTTCTCTCCAAGCCCTTATCACTTGGATTCTTGCTATTTTACTTTTGCTTTAAGATATCCCTGTTGTCTTATTAACTACTTTGAGTCCTACACAGATTTATGTAAGTGAGAAATATACAATATCCTATGTACCTCACCTGAGCTAAATAAAATCATTTTCCATCAAAGGAAGCATCACTGTTTTCACTTCTCTTTTCCTTACTATATTTTGGATAAAGATGATGTAGGCTTTTCATGCGCCAATCAAGTTGCATAATGTTTTTGAGTCAGTATTATTTACCAATTTATCTTGCTTCTGCATATATTGTTGGCTATGATTATATGACAGTTTCTCTTGTCTAACACACATTTACAAAATCAAAATTTTCTAATTCTCTTTAGTTTTGCTGGTGTCATTATGTATGCCATAGTTGCAAAATTGTGTTTTGTGCAACAATATAGAAGAATAAAATACAAAGGATGAAAAGAGACTCAACAAGGAGAGATAATCTTAAACTTGTCATAAAATAAAAGTGAATTTCCTAAAATTATTAATATGGTGACAAGTATATACAAATTTTGCATTAAATAATTGGGTGTAAATTCTTAACCCTAAGAAAGCTTATTGAACGATGGCTTTTTGATGTATGGAATGGATTGTTTACCAAATGAAGCAACATAACAGATATCTCTGGAATAACCAGCTTTACAGCTGACAGCAAACTCCTTAGGCCAAAGACTTTACATGTTTGGCACATTGTACTTATTGTACATCAGTGCTGTTTAAATATTTAATAGCAGTTGCTCCCATACCTATTCCTGGCTGGTCTAGCCTTCCTGACTTGTCATGTTCGTAATCAAATATGTATTTCTACATTAATCATTTGGGGTGTGGTGCCACTTTTAATCCCAGGTGGGATGATGCCATCTTCTGAAGGCTTGGTTGTGCTCTGGGTGACTAGAATAAAGATAATTAGCTATGAATATCAAACATTACTTTTTCTTTTTCTTATTTAAAAATATGTTCCTTTTTAGAGATAGATTCTTTGCGGAGTGAGTGTATTTTTTTCTAAAGATGAAGTAGTCACTGTTTTTGAAAATACTCTAGGACCTG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9700:HG4_10X_allpass_2602:HG2_10X_allpass_2217:HG2_PB_assemblyticsPBcR_6495:HG2_Ill_tnscope_1530:HG4_PB_pbsv_13922:HG4_PB_SVrefine2PBcRDovetail_6951:HG4_Ill_SVrefine2DISCOVARDovetail_9880:HG4_Ill_MetaSV_1286:HG3_PB_assemblyticsfalcon_6740:HG3_PB_SVrefine2Falcon1Dovetail_8441:HG2_PB_pbsv_13947:HG2_PB_SVrefine2PBcRplusDovetail_2767:HG2_PB_SVrefine2PB10Xhap12_10068:HG2_PB_SVrefine2Falcon2Bionano_6939:HG2_PB_SVrefine2Falcon1plusDovetail_2908:HG2_Ill_breakscan11_1987:HG2_Ill_SpiralSDKrefine_4189:HG2_Ill_MetaSV_1214;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9700:HG4_PB_pbsv_13922:HG4_PB_SVrefine2PBcRDovetail_6951:HG4_Ill_SVrefine2DISCOVARDovetail_9880:HG4_Ill_MetaSV_1286:HG3_PB_assemblyticsfalcon_6740:HG3_PB_SVrefine2Falcon1Dovetail_8441:HG2_PB_pbsv_13947:HG2_PB_SVrefine2PBcRplusDovetail_2767:HG2_PB_SVrefine2PB10Xhap12_10068:HG2_PB_SVrefine2Falcon2Bionano_6939:HG2_PB_SVrefine2Falcon1plusDovetail_2908:HG2_Ill_breakscan11_1987:HG2_Ill_SpiralSDKrefine_4189:HG2_Ill_MetaSV_1214;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00146234;ClusterMaxSizeDiff=0.00146234;ClusterMaxEditDist=0.00146234;PBcalls=10;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-6157;DistBack=32861;DistForward=-6155;DistMin=-6155;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=13:32532645-32538805;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=917.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:70:./.:17:20:17:11:0|1:69:0:0:21:0/1:60:24:0/1:440:222:6134:.:.
chr13	34192591	HG2_PB_assemblyticsPBcR_6510	AAAAGACTTAACAAATTTCTTCTACCCATCCCTTCAGTAATCCAAATGTGCATACATCCATTCATACATGCCCCATATATCTTACATCGATGGCTTGCTTACTATGAGCCAGATATTGAGGATACAAATTAAATAAATTGTGAGACTTCCTCTTCTAGCTATGATACAGTTACTGCTGCCAGATTTGCTCTCTGGCATATCATAAAACTGGAGAGAAAAAAACTGAATCTTTCCATCATTGAACAGCAGGGGAACTGAGGTAAGGAAACGTCAGATGAGCCCCATATTTGTCCTAGCTTCTTGTTGGGGGCATGTTTTGAACTGCAGTGCAGGGAGATAGAGCCCAAGCAGTGCACAGTGCTTTTGCTGAGCTGAGAAGGCTAAGATCAGACTTCAAGATGACAGAAGCATCTGGAACTCTCAGGGCAGGGTACTGAAAAGGAGGGTTCTGAGGAGAGCTGGGACCATAAGAATCTGTGTGTGTGTGTTTTGTGGATTCATGGCCAAGGGATATACCGTGCATTCAGAGGAAAAAATTCCATGAGTCCTAAAAGAAAGTGATTGCTTCAGGGCTGAGAGCAGACCATGAAATATTAGAAGCCATGTAAAGTTAGAAGACAGATTTCTGGAACAGTCAGTTGACAAGCATCTCTGAAAACCGTGGGCATTTCGTTCAGACCCCAAAAGCACCACAACCTATAAGCAAAGACCACACCTCAGATAAGGGACCT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_13927:HG3_PB_assemblyticsfalcon_6753:HG4_Ill_Krunchall_19247:HG2_PB_assemblyticsfalcon_6736:HG4_PB_assemblyticsfalcon_6650:HG4_PB_SVrefine2PBcRDovetail_6954:HG4_PB_SVrefine2Falcon1Dovetail_8490:HG4_Ill_manta_3268:HG4_Ill_MetaSV_1289:HG4_Ill_GATKHCSBGrefine_9602:HG4_Ill_Cortex_892:HG4_10X_allpass_2604:HG3_PB_SVrefine2Falcon1Dovetail_8444:HG3_Ill_Cortex_939:HG2_PB_assemblyticsPBcR_6510:HG2_PB_SVrefine2PBcRplusDovetail_2769:HG2_PB_SVrefine2PB10Xhap12_10071:HG2_PB_SVrefine2Falcon1plusDovetail_2912:HG2_Ill_manta_3840:HG2_Ill_breakscan11_1988:HG2_Ill_SpiralSDKrefine_4198:HG2_Ill_MetaSV_1215:HG2_Ill_GATKHCSBGrefine_9307:HG2_Ill_Cortex_2139:HG2_10X_allpass_2218:HG2_10X_SVrefine210Xhap12_9704:HG2_PB_pbsv_13954:HG2_Ill_tnscope_1531;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9704:HG2_10X_allpass_2218:HG2_Ill_Cortex_2139:HG2_Ill_GATKHCSBGrefine_9307:HG2_Ill_MetaSV_1215:HG2_Ill_SpiralSDKrefine_4198:HG2_Ill_breakscan11_1988:HG2_Ill_manta_3840:HG2_PB_SVrefine2Falcon1plusDovetail_2912:HG2_PB_SVrefine2PB10Xhap12_10071:HG2_PB_SVrefine2PBcRplusDovetail_2769:HG2_PB_assemblyticsPBcR_6510:HG3_Ill_Cortex_939:HG3_PB_SVrefine2Falcon1Dovetail_8444:HG4_10X_allpass_2604:HG4_Ill_Cortex_892:HG4_Ill_GATKHCSBGrefine_9602:HG4_Ill_MetaSV_1289:HG4_Ill_manta_3268:HG4_PB_SVrefine2Falcon1Dovetail_8490:HG4_PB_SVrefine2PBcRDovetail_6954:HG4_PB_assemblyticsfalcon_6650;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00410678;ClusterMaxSizeDiff=0.00410678;ClusterMaxEditDist=0.00410959;PBcalls=12;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=3;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-730;DistBack=4183;DistForward=29579;DistMin=4183;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=13:34192592-34193323;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=918.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:34:./.:4:2:0:6:0|1:50:0:0:36:0/1:48:23:0/1:75:19:1377:.:.
chr13	34390309	HG2_PB_SVrefine2Falcon1plusDovetail_2913	TGAACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCGCATCACTGCACTCCAGCCTGGGAGACAGACTGGGACTCCATCTCAAGAAAAAAAAAAAGAGCTAAGATACCTGAGGGCCAGAGTCATTAAACATTAAAGTGATTGCAGCTGTAGTTTACCAACCCCGAGGACTTTACTTCCTCTGTAGCAATTTCTCATATCCTATATATTCAAGAGTCTGGAGTAAAATTGCTAGATAAATACAGGGCCCTGGTTACATTTGAATTTCAGATAAAGGCTGATTTTTTTTCTCATATAAGTATGTCCCTGGCAATATTTATTACAATTTCAAATATTGCCAGGGACATACTTATAT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_13929:HG4_PB_assemblyticsfalcon_6652:HG4_PB_SVrefine2Falcon1Dovetail_8491:HG2_10X_allpass_2219:HG4_Ill_GATKHCSBGrefine_9605:HG2_Ill_GATKHCSBGrefine_9310:HG2_PB_HySA_25432:HG4_PB_SVrefine2PBcRDovetail_6955:HG4_Ill_manta_3270:HG4_Ill_SVrefine2DISCOVARDovetail_9886:HG2_PB_assemblyticsPBcR_6512:HG2_PB_SVrefine2PBcRplusDovetail_2770:HG2_PB_SVrefine2PB10Xhap12_10072:HG2_PB_SVrefine2Falcon1plusDovetail_2913:HG2_PB_PB10Xdip_8744:HG2_PB_PB10Xdip_8743:HG2_Ill_manta_3841:HG2_10X_SVrefine210Xhap12_9705:HG4_Ill_MetaSV_1291:HG4_Ill_Spiral_1090:HG2_Ill_Spiral_933:HG4_Ill_scalpel_12837:HG4_10X_allpass_2605:HG2_PB_assemblyticsfalcon_6738:HG4_PB_HySA_20330:HG4_Ill_MetaSV_1290:HG2_PB_pbsv_13956:HG2_Ill_tnscope_1532:HG2_Ill_MetaSV_1216:HG4_Ill_Krunchall_19248:HG2_Ill_Krunchall_18942;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9705:HG2_Ill_manta_3841:HG2_PB_PB10Xdip_8743:HG2_PB_PB10Xdip_8744:HG2_PB_SVrefine2Falcon1plusDovetail_2913:HG2_PB_SVrefine2PB10Xhap12_10072:HG2_PB_SVrefine2PBcRplusDovetail_2770:HG2_PB_assemblyticsPBcR_6512:HG4_Ill_SVrefine2DISCOVARDovetail_9886:HG4_Ill_manta_3270:HG4_PB_SVrefine2PBcRDovetail_6955;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0227273;ClusterMaxSizeDiff=0.0227273;ClusterMaxEditDist=0.104372;PBcalls=14;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-353;DistBack=29098;DistForward=-353;DistMin=-353;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=13:34390309-34390662;PctSeqSimilarity=0.9986;PctSizeSimilarity=0.9972;PctRecOverlap=0.9972;SizeDiff=1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=919.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:37:0|1:18:0:1:38:0|1:64:0:0:32:0/1:56:23:0/1:42:13:.:.:.
chr13	34641618	HG2_Ill_SpiralSDKrefine_4201	TAATTCCAGTAATCAGGGGCCTGAAAATTAATGGGCAATAGCAGATTAACAGGGAAAAAGATTATTATGCATCCAGGAGCATTCGGATTAAGAGGCTTCCTGAACATCTAGATATAGGGGTTTATATCTCAACTTAATAAAGAAAAGAGAGGAGGGAGAAAGGGCTTCGATGGGAAAACAAATGGGCTTTAGGAAAAACAAATTGGCTTTTAAGAAGATCGAATGAAACATATGACAGTTTGTGATGATGTTGTTATGCAATCTCTCATCCCAGTGAGTGAGTGGTCTTACCTGGAGTGAAGCACCCCCAGCAAGAGGATTTATGGCAGATTCACTCTTGGAAGTCTCTGCTTTTAGTCAGATATGAGAAACTCCAACAAAGCTCTTTCTGCATCTGAAACTAAAATGTCTTCAGTTTAAAATAATCTTCGTATCAACTCTAGAGTTTGGATGAGTCTCCACACTTTATTTCAACAAAGGCCGATGCAGAAACTCAGCATCTCGTTTGGATCCATATGTATGAAGTCAAGATACCACAAATAAGCAGAGACCTAGGAGCAGAGGAAGCCATAGGAATATGGATCTTCTAGGACTACTTGGAAATCTCAGTGCAATTTATGCTTCCTGAAGGTATGGGATTGAATGCTTTAGCCAATCTTATCTAGATAGTTGCGTAGTCAGAGAGAGTCCTTTCTAACTATGAGCATTAATTCCTTTGCTCCAAACAAATTTAAAAGTGCATCTAGCATAAATACTTAGGTATGACAAGTGCTACAGGGGAGAAAATAAAAGTGTAAGATGTGGACATTTATAAGGTCAGGTCTGGGATGAATGTCCTTTGTCTCATTACCTAACTCTGCCGCTCTTGTGTGATCTTGAACAGATTAATTCACCTCTCTGAGCCTTCATTTCATTATATATGTATATATGCAATACATGTTAAGTATCCCTGAAATGCTTATGACAAGAAGGGTTTCACATTTTGTAATCTGTTTTTATTTTGGAATATTTGCATATACCTAATGAGATATGTTGGGGATGGGACACAAATCTTAATATGGAATTTATTTATGTTTCACGTACACTTTATCCACATAACCTAAAGATAATTTTATACAATATTTTAAATAATTTTGTGTAATGACCAGGTGTGGTGGCTCGTGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTAAATCACTTGAGTTCAGGAGTTAGAGACCAGTCAGGGCAACATAGTAAAACCCCATCACTACAAAAAATAAAAATTAGCCAAGTGTGGTGGCATGTGCCTGTAGTACCAGCTATTCAGGAGGCTGAGATGGAAGGATCTATTAAATCTGGGAAGAGTTGAGGCTGCAGTTAGCTGTGATCATGTCACAGCACTCCAGTCTGGGCAACAGAGCAAGACCCTGTCTCAGAAAAACAAACAAAAATATTGTGCATGAAACAAAGTTTGTGTTCAGTAACTAACATGTGTAATTTTTAACTCATGGCATCATATTGGTGCTCAAAAAGTTTCAGATTTTGGAGCATTTTGGATTTTGGATTTCCAGATTAGTGTTGCTTAACCTATATAATTTTTATTTTTGAGTGTTTATTTAAATGCATTACTTCATTTGTCCTTTTCATAACATGAGATATTGTGATGCCTGTATTAATATTTAACAAACAAAAAGGCTTTAAGACATCAAGCAGCTTCTCCAAGATCACACAGCCAGAAAGTGACAGAGCCAAAATGAGAATCCAGTTCTCTTTGATCCCAAACTTTCTCTCTTAACCACTACATTGTACCACCTTAATATGCTGTAAGGTTGTTATAAGAATTAGGTTAAATTAAATTGATATAAGTGAGAAAGCATAAATAAATTGGTCTGCATAGTTCTGGCACATAGAAGTAACTTTAAAAATGGCAGGTGCTTTATAATTGTTTAATCATGAATAGTAAAATTATCTCTTGCTATGGTTTGCATGTGTCCCTCAAAGTTCATGTGCTGGAAACTGAATTCCCAGTGCAACAGTGTTAAGAGGTGGGACCTTTAAGAGGTTATTGGTGCATGAGGGCTCTGCCCTTGTAAATGGATTAACATTGTTATCACAGGAGTGGTTTGTTTTTAAAAAAAATAAATAAATAAAAGTGAGTCCTGTCTTGCTCTCTCATGTTCTCTTGCCCTCCTGCCTTCTGCCATGGAGTAACACAACACAAAGGCCCTTGCCAGACACTGGCACCTTGATATTGGACTTACCAGCCTCCAGAACCATGAGAAATAATGTCCTTTTGTTTCTAAATTACCCAGCCTGTAGTATTCTGTTATAGCAACACAAAACAGACTAAGAAATCTCTACCTGGCTCTTTTTGTTTGAGTACTCTCTGACATTTTGGAGATTAAATCTCATAACATATTTTATGCACACACACACACACACACACACACACACAAATCTATTGAATAAAGATGCATGTGTTATTTTGTTATGAGAGATCAAATGGGTAGTATTATAATTTTCAAGGGGGAATCTAGGGTGTAAAATATTGAGGCAGGAGCCTTAGAGAAAGTCTTCATGAAGGAGGTAGAACCTAAGCTGGGGAGAATTTACATGGTTCTTAGCTGGTAAACACAATTTCTCTAAGTACTTCATTTACAATAGAAATTAGCTTAGGCCCTGGATGAGTATGACTCATTTAAATGTTCAAAACCATGAATCACTCAATGTAGCACTATGGGC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1533:HG2_10X_allpass_2220:HG4_10X_allpass_2606:HG4_Ill_Krunchall_19250:HG2_Ill_Krunchall_18944:HG4_PB_pbsv_13931:HG4_PB_SVrefine2PBcRDovetail_6956:HG4_Ill_SVrefine2DISCOVARDovetail_9888:HG4_Ill_MetaSV_1292:HG2_PB_pbsv_13957:HG2_PB_SVrefine2PBcRplusDovetail_2771:HG2_PB_SVrefine2PB10Xhap12_10073:HG2_PB_SVrefine2Falcon2Bionano_6941:HG2_PB_SVrefine2Falcon1plusDovetail_2914:HG2_Ill_breakscan11_1989:HG2_Ill_SpiralSDKrefine_4201:HG2_Ill_MetaSV_1217:HG2_10X_SVrefine210Xhap12_9707;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9707:HG2_Ill_MetaSV_1217:HG2_Ill_SpiralSDKrefine_4201:HG2_Ill_breakscan11_1989:HG2_PB_SVrefine2Falcon1plusDovetail_2914:HG2_PB_SVrefine2Falcon2Bionano_6941:HG2_PB_SVrefine2PB10Xhap12_10073:HG2_PB_SVrefine2PBcRplusDovetail_2771:HG2_PB_pbsv_13957:HG4_Ill_MetaSV_1292:HG4_Ill_SVrefine2DISCOVARDovetail_9888:HG4_PB_SVrefine2PBcRDovetail_6956:HG4_PB_pbsv_13931;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0418379;ClusterMaxSizeDiff=0.0418379;ClusterMaxEditDist=0.0418379;PBcalls=7;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2731;DistBack=86271;DistForward=-2731;DistMin=-2731;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=13:34641619-34644353;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=920.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:54:64:./.:14:25:28:1:0|1:74:0:0:28:0/1:63:11:0/1:223:117:2789:.:.
chr13	36438404	HG3_PB_SVrefine2Falcon1Dovetail_8448	TAAAAAGTTGGCTATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10077:HG4_PB_pbsv_13942:HG4_PB_assemblyticsfalcon_6674:HG2_PB_assemblyticsPBcR_6532:HG2_PB_HySA_25451:HG3_PB_pbsv_13661:HG2_PB_PB10Xdip_8757:HG2_PB_SVrefine2Falcon1plusDovetail_2920:HG2_Ill_tnscope_1534:HG4_PB_SVrefine2PBcRDovetail_6961:HG4_PB_SVrefine2Falcon1Dovetail_8496:HG4_Ill_MetaSV_1294:HG4_Ill_GATKHCSBGrefine_9611:HG4_10X_allpass_2607:HG3_PB_SVrefine2Falcon1Dovetail_8448:HG3_Ill_manta_3150:HG3_Ill_SVrefine2DISCOVARDovetail_10043:HG3_Ill_GATKHCSBGrefine_9223:HG3_10X_allpass_2709:HG2_PB_pbsv_13968:HG2_PB_assemblyticsfalcon_6759:HG2_PB_SVrefine2PBcRplusDovetail_2777:HG2_PB_SVrefine2PB10Xhap12_10078:HG2_PB_SVrefine2Falcon2Bionano_6945:HG2_Ill_SVrefine2DISCOVARplusDovetail_3227:HG2_10X_SVrefine210Xhap12_9710:HG4_PB_HySA_20346;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9710:HG2_Ill_SVrefine2DISCOVARplusDovetail_3227:HG2_PB_SVrefine2Falcon2Bionano_6945:HG2_PB_SVrefine2PB10Xhap12_10078:HG2_PB_SVrefine2PBcRplusDovetail_2777:HG2_PB_assemblyticsfalcon_6759:HG2_PB_pbsv_13968:HG3_10X_allpass_2709:HG3_Ill_GATKHCSBGrefine_9223:HG3_Ill_SVrefine2DISCOVARDovetail_10043:HG3_Ill_manta_3150:HG3_PB_SVrefine2Falcon1Dovetail_8448:HG4_10X_allpass_2607:HG4_Ill_GATKHCSBGrefine_9611:HG4_Ill_MetaSV_1294:HG4_PB_SVrefine2Falcon1Dovetail_8496:HG4_PB_SVrefine2PBcRDovetail_6961;NumExactMatchSVs=17;ClusterMaxShiftDist=0.099359;ClusterMaxSizeDiff=0.099359;ClusterMaxEditDist=0.100917;PBcalls=17;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-317;DistForward=-312;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=13:36438405-36438738;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=921.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:27:0|1:21:1:0:26:0|1:57:1:0:20:0/1:24:16:0/1:36:8:.:.:.
chr13	36806770	HG2_Ill_Krunchall_18965	TAAGAATACAAAAAAAGATGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1990:HG4_PB_HySA_20348:HG3_PB_HySA_21054:HG2_PB_HySA_25457:HG3_PB_assemblyticsfalcon_6772:HG3_PB_SVrefine2Falcon1Dovetail_8450:HG4_PB_pbsv_13945:HG2_PB_pbsv_13971:HG3_PB_pbsv_13665:HG4_PB_SVrefine2PBcRDovetail_6963:HG4_PB_SVrefine2Falcon1Dovetail_8499:HG4_Ill_svaba_17441:HG4_Ill_scalpel_12853:HG4_Ill_manta_3274:HG4_Ill_SVrefine2DISCOVARDovetail_9892:HG4_Ill_Krunchall_19271:HG4_Ill_GATKHC_22288:HG4_Ill_GATKHCSBGrefine_9612:HG4_Ill_250bpfermikitraw_18387:HG4_Ill_150bpfermikitraw_17710:HG4_10X_allpass_2608:HG3_PB_SVrefine2PBcRDovetail_6592:HG3_Ill_svaba_17577:HG3_Ill_scalpel_13409:HG3_Ill_SVrefine2DISCOVARDovetail_10046:HG3_Ill_Krunchall_18599:HG3_Ill_GATKHC_22194:HG3_Ill_GATKHCSBGrefine_9226:HG3_Ill_250bpfermikitraw_18112:HG3_Ill_150bpfermikitraw_17604:HG3_10X_allpass_2710:HG2_PB_assemblyticsfalcon_6765:HG2_PB_SVrefine2PBcRplusDovetail_2779:HG2_PB_SVrefine2PB10Xhap12_10081:HG2_PB_SVrefine2Falcon2Bionano_6947:HG2_PB_SVrefine2Falcon1plusDovetail_2922:HG2_Ill_svaba_17414:HG2_Ill_scalpel_13151:HG2_Ill_manta_3849:HG2_Ill_SpiralSDKrefine_4212:HG2_Ill_SVrefine2DISCOVARplusDovetail_3230:HG2_Ill_Krunchall_18965:HG2_Ill_GATKHC_22309:HG2_Ill_GATKHCSBGrefine_9316:HG2_Ill_250bpfermikitraw_18634:HG2_Ill_150bpfermikitraw_17564:HG2_10X_SVrefine210Xhap12_9711;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9711:HG2_Ill_150bpfermikitraw_17564:HG2_Ill_250bpfermikitraw_18634:HG2_Ill_GATKHCSBGrefine_9316:HG2_Ill_GATKHC_22309:HG2_Ill_Krunchall_18965:HG2_Ill_SVrefine2DISCOVARplusDovetail_3230:HG2_Ill_SpiralSDKrefine_4212:HG2_Ill_manta_3849:HG2_Ill_scalpel_13151:HG2_Ill_svaba_17414:HG2_PB_SVrefine2Falcon1plusDovetail_2922:HG2_PB_SVrefine2Falcon2Bionano_6947:HG2_PB_SVrefine2PB10Xhap12_10081:HG2_PB_SVrefine2PBcRplusDovetail_2779:HG2_PB_assemblyticsfalcon_6765:HG3_10X_allpass_2710:HG3_Ill_150bpfermikitraw_17604:HG3_Ill_250bpfermikitraw_18112:HG3_Ill_GATKHCSBGrefine_9226:HG3_Ill_GATKHC_22194:HG3_Ill_Krunchall_18599:HG3_Ill_SVrefine2DISCOVARDovetail_10046:HG3_Ill_scalpel_13409:HG3_Ill_svaba_17577:HG3_PB_SVrefine2PBcRDovetail_6592:HG4_10X_allpass_2608:HG4_Ill_150bpfermikitraw_17710:HG4_Ill_250bpfermikitraw_18387:HG4_Ill_GATKHCSBGrefine_9612:HG4_Ill_GATKHC_22288:HG4_Ill_Krunchall_19271:HG4_Ill_SVrefine2DISCOVARDovetail_9892:HG4_Ill_manta_3274:HG4_Ill_scalpel_12853:HG4_Ill_svaba_17441:HG4_PB_SVrefine2Falcon1Dovetail_8499:HG4_PB_SVrefine2PBcRDovetail_6963;NumExactMatchSVs=38;ClusterMaxShiftDist=0.0430108;ClusterMaxSizeDiff=0.0430108;ClusterMaxEditDist=0.0430108;PBcalls=16;Illcalls=28;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-91;DistBack=13414;DistForward=-76;DistMin=-76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=13:36806771-36806878;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=922.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:./.:0:0:0:0:1/1:0:15:0:12:1/1:0:53:./.:.:.:.:.:.
chr13	37414465	HG4_Ill_GATKHCSBGrefine_9613	CTGTGCCTGCTAAGGTCTCAGGTTTCTAGGGCCATGGGATGGGGGCATGGCAGGCCATAGTGGTCTTGGGAAGTGCAACATTTGGGTGCGAAAACAGGAATCCCTGTTCTCACTTAGGTCTGTGGGCACAGGCCCGAGCGTGGAGCCCTCGCCTGGGGACCCCACCCTTCTCTACCCAGCACTTCCCTGCCTCCCTCTAGTATCAGTAGTAGAGTCTTGTGATAGGCTGGATAATGCCCCCACAAGATATCCATGTACTAATTCCAGGACTTGTTGATGTTGTCTTATGTGGCAAAAGGAACTTTGCAGAGGTGCTTAAGT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_13948:HG2_10X_allpass_2221:HG4_PB_assemblyticsfalcon_6684:HG3_PB_assemblyticsfalcon_6775:HG2_PB_assemblyticsfalcon_6769:HG2_PB_assemblyticsPBcR_6542:HG4_Ill_MetaSV_1296:HG3_Ill_MetaSV_1343:HG2_PB_HySA_25462:HG2_Ill_tnscope_1535:HG4_PB_SVrefine2PBcRDovetail_6965:HG4_PB_SVrefine2Falcon1Dovetail_8501:HG4_Ill_scalpel_12857:HG4_Ill_manta_3276:HG4_Ill_SVrefine2DISCOVARDovetail_9894:HG4_Ill_GATKHCSBGrefine_9613:HG4_10X_allpass_2609:HG3_PB_pbsv_13668:HG3_PB_SVrefine2PBcRDovetail_6594:HG3_PB_SVrefine2Falcon1Dovetail_8452:HG3_Ill_GATKHCSBGrefine_9227:HG3_10X_allpass_2711:HG2_PB_SVrefine2PBcRplusDovetail_2781:HG2_PB_SVrefine2PB10Xhap12_10083:HG2_PB_SVrefine2Falcon2Bionano_6949:HG2_PB_SVrefine2Falcon1plusDovetail_2924:HG2_Ill_manta_3851:HG2_Ill_SpiralSDKrefine_4216:HG2_Ill_MetaSV_1219:HG2_Ill_GATKHCSBGrefine_9317:HG2_10X_SVrefine210Xhap12_9712:HG4_Ill_Krunchall_19278:HG2_Ill_breakscan11_1991:HG2_Ill_Krunchall_18971:HG2_PB_pbsv_13974;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9712:HG2_Ill_GATKHCSBGrefine_9317:HG2_Ill_MetaSV_1219:HG2_Ill_SpiralSDKrefine_4216:HG2_Ill_manta_3851:HG2_PB_SVrefine2Falcon1plusDovetail_2924:HG2_PB_SVrefine2Falcon2Bionano_6949:HG2_PB_SVrefine2PB10Xhap12_10083:HG2_PB_SVrefine2PBcRplusDovetail_2781:HG3_10X_allpass_2711:HG3_Ill_GATKHCSBGrefine_9227:HG3_PB_SVrefine2Falcon1Dovetail_8452:HG3_PB_SVrefine2PBcRDovetail_6594:HG3_PB_pbsv_13668:HG4_10X_allpass_2609:HG4_Ill_GATKHCSBGrefine_9613:HG4_Ill_SVrefine2DISCOVARDovetail_9894:HG4_Ill_manta_3276:HG4_Ill_scalpel_12857:HG4_PB_SVrefine2Falcon1Dovetail_8501:HG4_PB_SVrefine2PBcRDovetail_6965;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0251572;ClusterMaxSizeDiff=0.0251572;ClusterMaxEditDist=0.0283912;PBcalls=16;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=45657;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=13:37414466-37414787;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=923.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:22:1|0:1:24:24:0:0|1:84:0:0:25:0/1:47:15:0/1:41:6:.:.:.
chr13	37880510	HG3_Ill_Krunchall_18606	ATATATACCTATATATATATACCTATATATATACCTATATATATATACCTATATATATACCTATATATATATACC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_13977:HG2_PB_HySA_25469:HG4_Ill_GATKHC_22298:HG4_Ill_GATKHCSBGrefine_9615:HG3_Ill_GATKHC_22202:HG3_Ill_GATKHCSBGrefine_9229:HG2_Ill_GATKHC_22317:HG2_Ill_GATKHCSBGrefine_9319:HG4_PB_SVrefine2Falcon1Dovetail_8504:HG4_PB_assemblyticsfalcon_6691:HG3_PB_HySA_21064:HG3_PB_pbsv_13671:HG4_Ill_svaba_17454:HG4_Ill_Krunchall_19285:HG4_Ill_250bpfermikitraw_18400:HG4_Ill_150bpfermikitraw_17721:HG3_Ill_svaba_17586:HG3_Ill_Krunchall_18606:HG3_Ill_250bpfermikitraw_18119:HG3_Ill_150bpfermikitraw_17610:HG2_Ill_svaba_17422:HG2_Ill_Krunchall_18973:HG2_Ill_250bpfermikitraw_18644:HG2_Ill_150bpfermikitraw_17574:HG4_PB_pbsv_13951;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17574:HG2_Ill_250bpfermikitraw_18644:HG2_Ill_Krunchall_18973:HG2_Ill_svaba_17422:HG3_Ill_150bpfermikitraw_17610:HG3_Ill_250bpfermikitraw_18119:HG3_Ill_Krunchall_18606:HG3_Ill_svaba_17586:HG4_Ill_150bpfermikitraw_17721:HG4_Ill_250bpfermikitraw_18400:HG4_Ill_Krunchall_19285:HG4_Ill_svaba_17454;NumExactMatchSVs=12;ClusterMaxShiftDist=0.377778;ClusterMaxSizeDiff=0.377778;ClusterMaxEditDist=0.377778;PBcalls=7;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-74;DistBack=-50;DistForward=-25;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=106;REFWIDENED=13:37880483-37880646;PctSeqSimilarity=0.8772;PctSizeSimilarity=0.8409;PctRecOverlap=0.8427;SizeDiff=-14;StartDistance=2;EndDistance=-12;GTMatch=0;TruScore=85;MatchId=924.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:0:30:0:21:./.:11:16:8:13:0/1:8:15:./.:.:.:.:.:.
chr13	39057315	HG2_PB_SVrefine2PB10Xhap12_10090	AGGAAAAAGTACATTTTGAATTCTTATACATTTATAATTAATTCAGTCATCTAACAAACACTTGTTTAGTGCTGGTTCTGTAGAAAATTATTAAGTGGGATCTCAGATCCCTTTAATCTCCCTTTGTGATAACTTTATTGTCTTGCAGGAAGCAGATGAAATAGAAACCATGACTTTCTAACTGTTGAATAAAGGACTTTAGGACCCTAATACACCTGCTCAAACTTAAGCTTTCAATTTTTAATGAGGAGAATCATGTGACTAATCATCCCCTGTCAAAAATTGTCATTTTTGATTCTTATGCTTGCTTGGTTATTGACATTTGTATTTCCATAAATATATTTTGTCCATAATGAAATTTGTCTATAAATGTTCCAGACATGTGTAATGGAGGTTGTGCTTGAATATTTTTGTGGGCCCAGGATTCTAGCTTAATCAGGACAAATGTTTGAGGAATTCCCATACTGGGACAGTTATGAATTGGTATTACTAAGGGTTGGCTGTAAATAGAGGACTACTCTATCTTGTTAACACTTTCAATTTAAGAGTGAGGACAATTCTTTCACATTCAAGCACCTAAGGCAATCTGGAAGGCTAGAGACTACCTCCTTATTCAGCATAACTAACATTAGGCCATATACTGACATCAAAGAGGAAGTGAAAGCTCTTTAATTTCTAATCTTTTACTGTCAATTGTGGAGGCAGTGGAATGTAGTGAAAGGTCTGGATTCGGAGTGCCTTAACTAGAACCCTGGCTCTACTGGGTAATAACTATGTGACCCTGTCTGCTTTTCTCAGGTTCTCTGCCTCATCTGCCTCACTTTCTTTTCAAAATATGAAAAATGGCAATATGTTTTCAATTAGAACTACATAAAATAATACACAAAGAATGCTTAGAACCAGAGGAATCCTTGTAAAATGATAACCAGAAAAAAAATTCTCAAAATTATAGAATTTGCCAATTTCTATTGTGCAAATCTTCCCCCTCCCCTGCCCCCAACTCAATTTCAAGCTGCCAATGTGACATCACTGAATTCAGAGGTAGAGATGTGCTAATTGGATCTTTGGAGATGGTATGAGCCAGCTCTAGCACACCGCTGCTTTTAACAGTGCCTTCACATTCAACAAAAAGAAATTATGCCTTCCAAGTTTATCCATGTTGTCACATGTGGCAGGATTTTATTCTTTTTAAGGCTTAGTAATATTTCATCATATATATACACACACACATATATATATGAATATATATGCACACATATATACACATATATATGAAGTATCACATATAAAGTATCTGAAATAGTCAAAGTCAAAGGAACAGAGTATAATATACATGTATATGTATATTATGCCTCATTTTCTTTATGTTTTCTTCTGTCAGTGGACACAGGTTGATTCCATATTTTAGCTATTGTAAACACAGCTGCAACAAACTTGAGAGTGCAGATATCTCTTTGATATACTGATTTCCTTTCCTTTGGGTATATACCAGGAGTGGGATTGGTGGATCATATAGTAGCTCTATTTTTAATTTTTTGAGGACCTGCTGTGCTGTTTTTCATACTGGCTGCACCATTATACATTCCCTCCAAGAGTGTACAAGGGTCCCAATTTCTCCACATCCTCACTAACATTGTTATGTCTTGCTTTGGATAATAGCTGTCCTAACAGGTATGAAGTACTATCTCATTACGGTTTTGATTTGCATATGCCAAGTAAAATAAGCCATCCACAAAAGGGCAAATAGTACATGACTCCATTTATATGAAGTATCTAAAATAGTCAAACTCAAAGGAACAGGGTATAATGGTGGTTGCCGGGGGTTTGGGGTAAGGGGGAAATGGGGCGTTGCTGTTAAATGGGTAGCAAATACAGTTAACACAAGATGAGTAAGTTTCAAAGATCTGTTGTACAATATTTTATGTATAATTAACAATACTGTATTTTTTAGTTAGAAATTTATTAAAAGAATAAATTGAACTGTGTTAAGTGTTTGTATTATAAATAAATAAATATTAGTAGTAGTCCTACTTTCTTGAAAACTTATAAGTAAACGTTGTCTCATCAAAGAGGTCACCATAACAGGCAGATTCTGAAACACTCTTTTAGTCTGCTTTATGCTGCTGTAACAGAATTCCTGAGGCTGAGGAATTTATAATCTACATATATTTATGTGGCTTATGGCTCCGGAGACTGTGAAGTCCAAGATCAAAGGGGTGCATCTGCTGAGGGCCTTCTTGCTGTGTCATCCCATGGCAGAAGGTAGAAGGGCATGCCAGACAGAGAGAAAGTGAGAGAGGAGGAGGTTGAACTCACAACCCCAAGCCCTTTTTTAATCTGCGTTAATCCATTCATGAGGGCAAAGCCCTAATGACCTGAATACCTCTCATTAGGCCCCACCTCCCAACACTGTTTCAGTACGGATTGGTTCCAACACATGAATTTTGAGGGACACATTCAAACGATAGCACTCCTCAAGTTCCTAGCACCTACTTTATGACATCCCCTGGTCAACAAGAGAAAGATGCATCTGTTCTGTAGACCTACTTTTTTCATGCTGTAGTTATTATTTTTCTACTTCGGCTGCTCTTATCAAGATCAGGGCAATTAGCAGCAAAAACTTAACCTGCCATGGTGCTATCCATGGTCGGACAAATCTTCAGCTGTTCTTCTTACATATAAGCAACTACTCAGGGACAGAGAATGTGTTTGTTGGTTCTAAATTACAGCTTGAGACCTAAACATATATCTTAATAGCTACTCTAGTTTTAAAACCAAAAGTGCCATGATTTGTTTGACTAATTTCAGAATTTCTATTGAGTGTTCTCTGGTTCCAGGTAGCTGCATGGGGATGGAGTCTTCATCTTTTTCATAGCAAATGAATTTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9718:HG3_PB_pbsv_13677:HG2_10X_allpass_2222:HG4_Ill_Krunchall_19298:HG3_Ill_Krunchall_18616:HG2_Ill_Krunchall_18985:HG4_10X_allpass_2610:HG3_10X_allpass_2713:HG3_PB_assemblyticsfalcon_6791:HG2_PB_assemblyticsPBcR_6558:HG4_PB_pbsv_13959:HG4_PB_assemblyticsfalcon_6700:HG2_PB_assemblyticsfalcon_6789:HG2_Ill_tnscope_1536:HG4_PB_SVrefine2PBcRDovetail_6969:HG4_PB_SVrefine2Falcon1Dovetail_8510:HG4_Ill_SVrefine2DISCOVARDovetail_9905:HG4_Ill_MetaSV_1298:HG4_Ill_GATKHCSBGrefine_9620:HG3_PB_SVrefine2PBcRDovetail_6601:HG3_PB_SVrefine2Falcon1Dovetail_8458:HG3_Ill_MetaSV_1347:HG2_PB_pbsv_13981:HG2_PB_SVrefine2PBcRplusDovetail_2787:HG2_PB_SVrefine2PB10Xhap12_10090:HG2_PB_SVrefine2Falcon1plusDovetail_2927:HG2_Ill_breakscan11_1992:HG2_Ill_SpiralSDKrefine_4224:HG2_Ill_SVrefine2DISCOVARplusDovetail_3240:HG2_Ill_MetaSV_1221:HG2_Ill_GATKHCSBGrefine_9323;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9718:HG4_PB_SVrefine2PBcRDovetail_6969:HG4_PB_SVrefine2Falcon1Dovetail_8510:HG4_Ill_SVrefine2DISCOVARDovetail_9905:HG4_Ill_MetaSV_1298:HG4_Ill_GATKHCSBGrefine_9620:HG3_PB_SVrefine2PBcRDovetail_6601:HG3_PB_SVrefine2Falcon1Dovetail_8458:HG3_Ill_MetaSV_1347:HG2_PB_pbsv_13981:HG2_PB_SVrefine2PBcRplusDovetail_2787:HG2_PB_SVrefine2PB10Xhap12_10090:HG2_PB_SVrefine2Falcon1plusDovetail_2927:HG2_Ill_breakscan11_1992:HG2_Ill_SpiralSDKrefine_4224:HG2_Ill_SVrefine2DISCOVARplusDovetail_3240:HG2_Ill_MetaSV_1221:HG2_Ill_GATKHCSBGrefine_9323;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00554401;ClusterMaxSizeDiff=0.00554401;ClusterMaxEditDist=0.00554401;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2886;DistBack=99630;DistForward=-2883;DistMin=-2883;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=13:39057316-39060205;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=925.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:68:1|0:3:22:32:7:0|1:52:0:0:33:0/1:55:28:0/1:214:88:2853:.:.
chr13	39934152	HG2_10X_SVrefine210Xhap12_9721	GTTTTGTTTTGTTTTGTTTTGTTTTTGAGACAGTCTCGCTCTGTCGCCCAGGTTGGAGTGCAGTGGCACGATCTCTGCTCACTGCAAGCTCTGCCTCCCAGGTTCATGCCAATCTCCTGCCCCAGCCTCCAGAGTAGCTGGGATTACAGGAGTCCGCCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGAGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCCAGCCAAGACATTTTTTAAAGACTCCCTTCATCTTTTTTGTTTGCCCTACTTTCTCCACAGAGCTAACCAGAAGATAAAATGCAGATGTGTTCATCAGTAAGAACTGACACACTCAAGCTATGGCATTAAGCGCTCTCCATAACCACGCATGTCAAAGGGAGCAGAGATTTATGCTCTAGAAAAGATAAGATGTGTATTGGCAAAGAGCTCATAACAGAACAGTGCTATGTCTAAGGAGATATGTTAGGGGTGAATTTTGATGGGAAAATATATATCAGCCTTGTCAATTTTATCCAGTGTAGGTTAATCCATTCTGTAGCTGGAGTAGGAGGAGTAAGGAAAGAGCTCTACAGAGACATGCATTAGAGGGCAATGACCAGCTGTTCAAACGCTAAGCTCAAATAGGAGCACATGTTAGATGGGCCTCAGATTGTAAGGGGACAAAAAAAAAAAAAAACCTTTCTGAATTACAAATGCATTCTTTTATATTCAATGGTATAAGTTTCCCTTCTGGATTCCCACAAAAATTTTGCTGAAGAGCCATAGTTTTCATTTGCTCTGTTGAATCTCTCTTGCCCGCCCCCTCAAATGTTTTAGCTCCACTTTCAAGGTAAGAGACTGTGGGCAAAAGAAAATAACAGGTTTGTGCCCATTTATTTGTACCAGTTATTGTCCTCCAAAGAAATGGTGCCGGCCATCATCAACACAAGAATTTACCAGAAAATACCTATATGAGATCTCATACTTGCACAGCTGCTCAAATCTGTGAAAGGGCAGGACACACTGACCAGTAGCTGGACTTGACACAAGGGTCAGCAGTGCTGAGCCCAAATTATACAGCAGAGGATGGAAGACATTGCTAGCCATCATTATTATTACTAACGCCGTCACTATTAATACTTTTCTGACATCTTAACAATTTCTAACATCAGAATGAAGTTAGTGAAGAAAGCAACTTTTTTTCTTTCAAATTTTGAGCCTCTGAAGAATTTTTTTTAA	G	20	PASS	ClusterIDs=HG4_Ill_MetaSV_1299:HG2_10X_allpass_2223:HG4_Ill_Krunchall_19309:HG3_Ill_Krunchall_18624:HG2_PB_pbsv_13984:HG2_PB_HySA_25488:HG4_PB_pbsv_13961:HG4_Ill_GATKHCSBGrefine_9621:HG3_Ill_MetaSV_1348:HG3_Ill_GATKHCSBGrefine_9234:HG3_10X_allpass_2715:HG2_Ill_tnscope_1537:HG2_Ill_SpiralSDKrefine_4228:HG2_Ill_MetaSV_1222:HG4_PB_SVrefine2PBcRDovetail_6972:HG4_PB_SVrefine2Falcon1Dovetail_8514:HG4_Ill_SVrefine2DISCOVARDovetail_9909:HG3_PB_pbsv_13680:HG3_PB_SVrefine2PBcRDovetail_6604:HG3_PB_SVrefine2Falcon1Dovetail_8462:HG3_Ill_SVrefine2DISCOVARDovetail_10061:HG2_PB_SVrefine2PBcRplusDovetail_2790:HG2_PB_SVrefine2Falcon1plusDovetail_2931:HG2_10X_SVrefine210Xhap12_9721:HG2_PB_SVrefine2PB10Xhap12_10094;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9721:HG2_PB_SVrefine2Falcon1plusDovetail_2931:HG2_PB_SVrefine2PBcRplusDovetail_2790:HG3_Ill_SVrefine2DISCOVARDovetail_10061:HG3_PB_SVrefine2Falcon1Dovetail_8462:HG3_PB_SVrefine2PBcRDovetail_6604:HG3_PB_pbsv_13680:HG4_Ill_SVrefine2DISCOVARDovetail_9909:HG4_PB_SVrefine2Falcon1Dovetail_8514:HG4_PB_SVrefine2PBcRDovetail_6972;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0993352;ClusterMaxSizeDiff=0.0993352;ClusterMaxEditDist=0.0993352;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1298;DistBack=-1299;DistForward=-1274;DistMin=-1299;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=297;REFWIDENED=13:39934153-39935747;PctSeqSimilarity=0.95;PctSizeSimilarity=1;PctRecOverlap=0.9769;SizeDiff=0;StartDistance=-30;EndDistance=-30;GTMatch=0;TruScore=97;MatchId=926.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:30:38:0|1:25:2:2:33:./.:9:17:39:0:0/1:64:10:0/1:140:40:1270:.:.
chr13	40028469	HG2_PB_SVrefine2Falcon2Bionano_6956	TAAGAGTTGTAATTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTACAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_1993:HG4_10X_allpass_2611:HG4_PB_SVrefine2PBcRDovetail_6973:HG4_PB_pbsv_13962:HG2_PB_assemblyticsPBcR_6569:HG2_PB_SVrefine2PB10Xhap12_10095:HG2_PB_PB10Xdip_8794:HG4_Ill_Krunchall_19311:HG2_Ill_Krunchall_18994:HG4_Ill_MetaSV_1300:HG2_Ill_tnscope_1538:HG2_Ill_MetaSV_1223:HG4_PB_SVrefine2Falcon1Dovetail_8515:HG4_Ill_manta_3278:HG4_Ill_SVrefine2DISCOVARDovetail_9910:HG4_Ill_GATKHCSBGrefine_9623:HG2_PB_pbsv_13985:HG2_PB_SVrefine2PBcRplusDovetail_2791:HG2_PB_SVrefine2Falcon2Bionano_6956:HG2_Ill_manta_3853:HG2_Ill_GATKHCSBGrefine_9325:HG2_10X_allpass_2224:HG2_10X_SVrefine210Xhap12_9722;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9722:HG2_10X_allpass_2224:HG2_Ill_GATKHCSBGrefine_9325:HG2_Ill_manta_3853:HG2_PB_SVrefine2Falcon2Bionano_6956:HG2_PB_SVrefine2PBcRplusDovetail_2791:HG2_PB_pbsv_13985:HG4_Ill_GATKHCSBGrefine_9623:HG4_Ill_SVrefine2DISCOVARDovetail_9910:HG4_Ill_manta_3278:HG4_PB_SVrefine2Falcon1Dovetail_8515;NumExactMatchSVs=11;ClusterMaxShiftDist=0.292763;ClusterMaxSizeDiff=0.292763;ClusterMaxEditDist=0.292763;PBcalls=9;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=84726;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=13:40028470-40028803;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=927.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:40:0|1:55:0:1:38:0|1:45:0:0:24:0/1:44:22:0/1:23:10:.:.:.
chr13	41271111	HG3_PB_HySA_21094	TAATAAGGCACTTATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9725:HG3_PB_assemblyticsfalcon_6819:HG2_PB_assemblyticsPBcR_6577:HG4_PB_pbsv_13969:HG4_Ill_Krunchall_19323:HG3_Ill_Krunchall_18636:HG3_Ill_Spiral_14529:HG2_PB_SVrefine2PB10Xhap12_10099:HG2_PB_PB10Xdip_8815:HG2_PB_pbsv_13989:HG3_PB_SVrefine2Falcon1Dovetail_8467:HG2_Ill_MetaSV_1224:HG4_PB_assemblyticsfalcon_6720:HG4_Ill_scalpel_12884:HG4_Ill_GATKHCSBGrefine_9626:HG4_10X_allpass_2613:HG3_PB_pbsv_13687:HG3_PB_HySA_21094:HG3_Ill_scalpel_13435:HG3_Ill_manta_3152:HG3_Ill_MetaSV_1349:HG3_Ill_GATKHCSBGrefine_9236:HG2_PB_SVrefine2PBcRplusDovetail_2793:HG2_PB_SVrefine2PB10Xhap12_10098:HG2_PB_SVrefine2Falcon2Bionano_6959:HG2_PB_SVrefine2Falcon1plusDovetail_2936:HG2_Ill_scalpel_13178:HG2_Ill_manta_3854:HG2_Ill_breakscan11_1994:HG2_Ill_GATKHCSBGrefine_9327;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9725:HG4_PB_assemblyticsfalcon_6720:HG4_Ill_scalpel_12884:HG4_Ill_GATKHCSBGrefine_9626:HG4_10X_allpass_2613:HG3_PB_pbsv_13687:HG3_PB_HySA_21094:HG3_Ill_scalpel_13435:HG3_Ill_manta_3152:HG3_Ill_MetaSV_1349:HG3_Ill_GATKHCSBGrefine_9236:HG2_PB_SVrefine2PBcRplusDovetail_2793:HG2_PB_SVrefine2PB10Xhap12_10098:HG2_PB_SVrefine2Falcon2Bionano_6959:HG2_PB_SVrefine2Falcon1plusDovetail_2936:HG2_Ill_scalpel_13178:HG2_Ill_manta_3854:HG2_Ill_breakscan11_1994:HG2_Ill_GATKHCSBGrefine_9327;NumExactMatchSVs=19;ClusterMaxShiftDist=0.1376;ClusterMaxSizeDiff=0.1376;ClusterMaxEditDist=0.1376;PBcalls=14;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=-297;DistForward=6650;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=13:41271112-41271438;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=928.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:22:0|1:22:0:1:22:0|1:53:0:1:19:0/1:37:24:0/1:15:6:.:.:.
chr13	41453836	HG4_Ill_scalpel_12885	GGCACTCCTTTCTACCATATGCCCATCCTCGTCTACCCCAGTATATCGCTGCT	G	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_6721:HG4_Ill_GATKHC_22335:HG4_Ill_GATKHCSBGrefine_9627:HG2_Ill_GATKHC_22356:HG2_Ill_GATKHCSBGrefine_9328:HG2_Ill_SpiralSDKrefine_4236:HG4_Ill_manta_3280:HG4_CG_vcfBeta_8872:HG2_Ill_manta_3855:HG2_CG_vcfBeta_7906:HG4_PB_HySA_20385:HG4_Ill_Spiral_1091:HG4_Ill_svaba_17485:HG4_Ill_scalpel_12885:HG4_Ill_Krunchall_19325:HG4_Ill_250bpfermikitraw_18437:HG4_Ill_150bpfermikitraw_17754:HG2_Ill_svaba_17451:HG2_Ill_Krunchall_19009:HG2_Ill_250bpfermikitraw_18678:HG2_Ill_150bpfermikitraw_17609:HG2_10X_allpass_2225:HG3_PB_assemblyticsfalcon_6821:HG4_PB_pbsv_13970:HG2_PB_pbsv_13990;NumClusterSVs=25;ExactMatchIDs=HG2_10X_allpass_2225:HG2_Ill_150bpfermikitraw_17609:HG2_Ill_250bpfermikitraw_18678:HG2_Ill_Krunchall_19009:HG2_Ill_svaba_17451:HG4_Ill_150bpfermikitraw_17754:HG4_Ill_250bpfermikitraw_18437:HG4_Ill_Krunchall_19325:HG4_Ill_scalpel_12885:HG4_Ill_svaba_17485;NumExactMatchSVs=10;ClusterMaxShiftDist=0.204082;ClusterMaxSizeDiff=0.204082;ClusterMaxEditDist=0.206186;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=2;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=13;NumTechs=4;NumTechsExact=2;SVLEN=-52;DistBack=6678;DistForward=23639;DistMin=6678;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=13:41453835-41453889;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=0.9811;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=929.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:30:0|1:35:1:3:27:0|1:24:0:0:12:0/1:25:30:./.:.:.:.:.:.
chr13	41930509	HG3_Ill_GATKHCSBGrefine_9238	TATCTTAGTGTGCATCTCTATTTAAAACACGTAAACAGAAGAAGTCATCGCAGTGCCATGTCACACAAAACCTCATAACATAATATCTGATACCCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9729:HG4_PB_HySA_20392:HG2_PB_HySA_25512:HG3_PB_pbsv_13689:HG4_PB_pbsv_13972:HG2_PB_pbsv_13992:HG3_PB_HySA_21098:HG4_PB_SVrefine2PBcRDovetail_6978:HG4_PB_SVrefine2Falcon1Dovetail_8521:HG4_Ill_SVrefine2DISCOVARDovetail_9913:HG4_Ill_GATKHCSBGrefine_9629:HG4_Ill_250bpfermikitraw_18444:HG4_Ill_150bpfermikitraw_17760:HG3_PB_SVrefine2Falcon1Dovetail_8469:HG3_Ill_SVrefine2DISCOVARDovetail_10070:HG3_Ill_GATKHCSBGrefine_9238:HG3_Ill_250bpfermikitraw_18160:HG3_Ill_150bpfermikitraw_17652:HG2_PB_SVrefine2PBcRplusDovetail_2795:HG2_PB_SVrefine2PB10Xhap12_10101:HG2_PB_SVrefine2Falcon2Bionano_6961:HG2_PB_SVrefine2Falcon1plusDovetail_2938:HG2_Ill_manta_3857:HG2_Ill_SpiralSDKrefine_4240:HG2_Ill_SVrefine2DISCOVARplusDovetail_3246:HG2_Ill_GATKHCSBGrefine_9329:HG2_Ill_250bpfermikitraw_18685:HG2_Ill_150bpfermikitraw_17614;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9729:HG4_PB_SVrefine2PBcRDovetail_6978:HG4_PB_SVrefine2Falcon1Dovetail_8521:HG4_Ill_SVrefine2DISCOVARDovetail_9913:HG4_Ill_GATKHCSBGrefine_9629:HG4_Ill_250bpfermikitraw_18444:HG4_Ill_150bpfermikitraw_17760:HG3_PB_SVrefine2Falcon1Dovetail_8469:HG3_Ill_SVrefine2DISCOVARDovetail_10070:HG3_Ill_GATKHCSBGrefine_9238:HG3_Ill_250bpfermikitraw_18160:HG3_Ill_150bpfermikitraw_17652:HG2_PB_SVrefine2PBcRplusDovetail_2795:HG2_PB_SVrefine2PB10Xhap12_10101:HG2_PB_SVrefine2Falcon2Bionano_6961:HG2_PB_SVrefine2Falcon1plusDovetail_2938:HG2_Ill_manta_3857:HG2_Ill_SpiralSDKrefine_4240:HG2_Ill_SVrefine2DISCOVARplusDovetail_3246:HG2_Ill_GATKHCSBGrefine_9329:HG2_Ill_250bpfermikitraw_18685:HG2_Ill_150bpfermikitraw_17614;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0314136;ClusterMaxSizeDiff=0.0314136;ClusterMaxEditDist=0.031746;PBcalls=13;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-95;DistBack=57980;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=95;REFWIDENED=13:41930510-41930699;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=930.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:0:27:1:27:./.:0:9:0:4:1/1:0:37:./.:.:.:.:.:.
chr13	42155100	HG2_PB_SVrefine2Falcon2Bionano_6964	GGAGAGTGAGTCATCTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTTTTTGAGACGGAGTCTCGCTGTCGTCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGAGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCGTGTTACCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2941:HG3_PB_assemblyticsfalcon_6830:HG3_PB_SVrefine2Falcon1Dovetail_8471:HG3_Ill_Krunchall_18651:HG2_Ill_Krunchall_19020:HG2_PB_pbsv_13998:HG3_PB_pbsv_13697:HG3_Ill_manta_3155:HG3_Ill_GATKHCSBGrefine_9242:HG3_10X_allpass_2717:HG2_PB_SVrefine2PBcRplusDovetail_2799:HG2_PB_SVrefine2PB10Xhap12_10105:HG2_PB_SVrefine2Falcon2Bionano_6964:HG2_PB_PB10Xdip_8826:HG2_Ill_manta_3861:HG2_Ill_breakscan11_1995:HG2_Ill_SpiralSDKrefine_4245:HG2_Ill_SVrefine2DISCOVARplusDovetail_3249:HG2_Ill_GATKHCSBGrefine_9332:HG2_10X_SVrefine210Xhap12_9732:HG3_Ill_Spiral_14541:HG3_Ill_MetaSV_1351:HG2_Ill_tnscope_1539:HG2_Ill_MetaSV_1225:HG2_PB_assemblyticsfalcon_6819;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9732:HG2_Ill_GATKHCSBGrefine_9332:HG2_Ill_SVrefine2DISCOVARplusDovetail_3249:HG2_Ill_SpiralSDKrefine_4245:HG2_Ill_breakscan11_1995:HG2_Ill_manta_3861:HG2_PB_PB10Xdip_8826:HG2_PB_SVrefine2Falcon2Bionano_6964:HG2_PB_SVrefine2PB10Xhap12_10105:HG2_PB_SVrefine2PBcRplusDovetail_2799:HG3_10X_allpass_2717:HG3_Ill_GATKHCSBGrefine_9242:HG3_Ill_manta_3155;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0118519;ClusterMaxSizeDiff=0.00591716;ClusterMaxEditDist=0.115556;PBcalls=10;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=7477;DistForward=-338;DistMin=-338;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=13:42155101-42155453;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=931.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:27:0|1:40:0:1:25:0|1:52:0:1:20:0/1:46:25:0/1:29:7:.:.:.
chr13	42735523	HG4_PB_SVrefine2Falcon1Dovetail_8526	ACCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCATGGGGTCAGGAGATCAAGACCATCCTGGCTAACACAGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGTGGGCG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2946:HG4_PB_pbsv_13982:HG2_PB_pbsv_14005:HG4_PB_SVrefine2PBcRDovetail_6981:HG4_PB_SVrefine2Falcon1Dovetail_8526:HG4_Ill_SVrefine2DISCOVARDovetail_9915:HG3_PB_SVrefine2Falcon1Dovetail_8475:HG2_PB_SVrefine2PBcRplusDovetail_2803:HG2_PB_SVrefine2PB10Xhap12_10110:HG2_PB_SVrefine2Falcon2Bionano_6968:HG2_Ill_SVrefine2DISCOVARplusDovetail_3252:HG2_10X_allpass_2226:HG2_10X_SVrefine210Xhap12_9734;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9734:HG2_10X_allpass_2226:HG2_Ill_SVrefine2DISCOVARplusDovetail_3252:HG2_PB_SVrefine2Falcon2Bionano_6968:HG2_PB_SVrefine2PB10Xhap12_10110:HG2_PB_SVrefine2PBcRplusDovetail_2803:HG3_PB_SVrefine2Falcon1Dovetail_8475:HG4_Ill_SVrefine2DISCOVARDovetail_9915:HG4_PB_SVrefine2Falcon1Dovetail_8526:HG4_PB_SVrefine2PBcRDovetail_6981;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0151515;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.204545;PBcalls=9;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-133;DistBack=2142;DistForward=-86;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=159;REFWIDENED=13:42735524-42735815;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=932.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:./.:24:6:8:24:./.:0:1:13:1:0/1:12:9:./.:.:.:.:.:.
chr13	42755952	HG4_10X_allpass_2615	CTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGGTGCTGGCAGCTGAGCTGCTGG	C	20	PASS	ClusterIDs=HG3_PB_pbsv_13700:HG4_Ill_Krunchall_19339:HG3_PB_HySA_21110:HG4_PB_HySA_20402:HG4_PB_assemblyticsfalcon_6736:HG2_PB_assemblyticsfalcon_6826:HG2_PB_assemblyticsPBcR_6592:HG4_PB_pbsv_13983:HG4_Ill_Krunchall_19338:HG3_Ill_Krunchall_18656:HG2_Ill_Krunchall_19027:HG2_PB_pbsv_14006:HG4_Ill_MetaSV_1303:HG3_Ill_MetaSV_1353:HG2_PB_HySA_25526:HG2_Ill_tnscope_1540:HG2_Ill_MetaSV_1227:HG4_PB_SVrefine2PBcRDovetail_6982:HG4_PB_SVrefine2Falcon1Dovetail_8527:HG4_10X_allpass_2615:HG3_Ill_SVrefine2DISCOVARDovetail_10076:HG3_10X_allpass_2718:HG2_PB_SVrefine2PBcRplusDovetail_2804:HG2_PB_SVrefine2PB10Xhap12_10111:HG2_PB_SVrefine2Falcon2Bionano_6969:HG2_PB_SVrefine2Falcon1plusDovetail_2947:HG2_Ill_manta_3863:HG2_Ill_SVrefine2DISCOVARplusDovetail_3253:HG2_Ill_GATKHCSBGrefine_9334:HG2_10X_allpass_2227:HG2_10X_SVrefine210Xhap12_9735:HG4_Ill_SVrefine2DISCOVARDovetail_9916:HG4_Ill_GATKHCSBGrefine_9634:HG3_PB_SVrefine2Falcon1Dovetail_8476:HG3_Ill_GATKHCSBGrefine_9245;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9735:HG2_10X_allpass_2227:HG2_Ill_GATKHCSBGrefine_9334:HG2_Ill_SVrefine2DISCOVARplusDovetail_3253:HG2_Ill_manta_3863:HG2_PB_SVrefine2Falcon1plusDovetail_2947:HG2_PB_SVrefine2Falcon2Bionano_6969:HG2_PB_SVrefine2PB10Xhap12_10111:HG2_PB_SVrefine2PBcRplusDovetail_2804:HG3_10X_allpass_2718:HG3_Ill_SVrefine2DISCOVARDovetail_10076:HG4_10X_allpass_2615:HG4_PB_SVrefine2Falcon1Dovetail_8527:HG4_PB_SVrefine2PBcRDovetail_6982;NumExactMatchSVs=14;ClusterMaxShiftDist=0.213178;ClusterMaxSizeDiff=0.213178;ClusterMaxEditDist=0.213178;PBcalls=16;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-273;DistBack=5257;DistForward=-226;DistMin=-226;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=28;REFWIDENED=13:42755953-42756253;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=933.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:78:1/1:1:30:2:37:1/1:0:17:0:17:1/1:0:46:./.:.:.:.:.:.
chr13	43053191	HG2_PB_SVrefine2PBcRplusDovetail_2808	CAAGCATTACATTTAAGGCCAATGTGATTGACAGGATTTGGTGATAGAGTGCCATGGGAGCTGAGGAAGGAGAAACTGAGGATGAGTAGTCATGGATTCACAGACATTAAAGTGCAGATAGTTTTATTTAATTGTAGTTAATTTAGGAAATACACGTTAGTATTAAAAAAAAACAAACCCTCCAGAATCTCTCCCCGGAGAAAGAACTGTAACATTTTGATGTGTTTCTTAACACCTAGGTGTGATTCCTTGTTACTCTCTGTGATGTTTAAACTGAGACCTAAAGATTAAGAAGGGAGTGGTAGCAGAGACATGGGAGGTGCCTCCAGGCAGAGATGAGCTTGTGGAAGGCCCCGAGAGGGGAGAGACCGGCCTGTGGAAGGACCTGGAAGAAGATCAGGGGGCTGGAGTCGAGGGTGAGAGCAAGAGCAGTGGGATGAAGTTGCAGGTTGGCAGCCAGATCACATGGGACCTTGTGGGGCATGCCCAGCATTTGGGCAACTGGGAAGTTTGATGAGTTTTGACCAGGAAACTGATATGCCATGGTCTTTCTTTTCCCAAAGACCACTGATTGTGGGAGGCAGGTGTGGAAGCAGGGAGACCAGATACATTCTCGTGAAAGATTATGGTGGCAGTGGAGATAGA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9738:HG2_PB_pbsv_14012:HG4_PB_pbsv_13987:HG4_Ill_MetaSV_1306:HG2_Ill_tnscope_1542:HG2_Ill_MetaSV_1230:HG4_PB_SVrefine2PBcRDovetail_6986:HG4_PB_SVrefine2Falcon1Dovetail_8531:HG4_Ill_SVrefine2DISCOVARDovetail_9918:HG4_10X_allpass_2616:HG3_PB_SVrefine2Falcon1Dovetail_8480:HG2_PB_SVrefine2PBcRplusDovetail_2808:HG2_PB_SVrefine2PB10Xhap12_10115:HG2_PB_SVrefine2Falcon1plusDovetail_2951;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9738:HG4_PB_SVrefine2PBcRDovetail_6986:HG4_PB_SVrefine2Falcon1Dovetail_8531:HG4_Ill_SVrefine2DISCOVARDovetail_9918:HG4_10X_allpass_2616:HG3_PB_SVrefine2Falcon1Dovetail_8480:HG2_PB_SVrefine2PBcRplusDovetail_2808:HG2_PB_SVrefine2PB10Xhap12_10115:HG2_PB_SVrefine2Falcon1plusDovetail_2951;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00465477;ClusterMaxSizeDiff=0.00465477;ClusterMaxEditDist=0.004662;PBcalls=8;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-644;DistBack=2597;DistForward=-644;DistMin=-644;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=127;REFWIDENED=13:43053192-43053962;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=934.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:44:1|0:0:38:41:0:1|0:0:20:37:0:0/1:39:17:0/1:39:8:.:.:.
chr13	43539794	HG2_PB_pbsv_14014	TGAAAATCAGCTGGAGTCCCTGTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCGTCTCCCTCTCCCTCGTCTCCCTCTCCCTCTCCCTCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCGTCTCCCTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGTCTGCCGAATGCCTGCAATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAACCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTACGCCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCATCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATTTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAAATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTAAGGAGCGTCTCCGCCCGGCAGCCACCCCGGCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCCGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGAATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCCCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9741:HG4_Ill_Krunchall_19350:HG3_Ill_Krunchall_18662:HG2_Ill_Krunchall_19040:HG2_10X_allpass_2229:HG3_10X_allpass_2720:HG4_PB_assemblyticsfalcon_6750:HG3_PB_assemblyticsfalcon_6852:HG2_PB_assemblyticsfalcon_6837:HG2_PB_assemblyticsPBcR_6602:HG3_PB_pbsv_13706:HG2_Ill_tnscope_1543:HG4_PB_pbsv_13989:HG4_PB_SVrefine2PBcRDovetail_6988:HG4_PB_SVrefine2Falcon1Dovetail_8533:HG4_Ill_SVrefine2DISCOVARDovetail_9920:HG4_Ill_MetaSV_1308:HG4_Ill_GATKHCSBGrefine_9636:HG4_10X_allpass_2617:HG3_PB_SVrefine2Falcon1Dovetail_8483:HG3_Ill_MetaSV_1356:HG3_Ill_GATKHCSBGrefine_9247:HG2_PB_pbsv_14014:HG2_PB_SVrefine2PBcRplusDovetail_2811:HG2_PB_SVrefine2PB10Xhap12_10119:HG2_PB_SVrefine2Falcon2Bionano_6976:HG2_PB_SVrefine2Falcon1plusDovetail_2954:HG2_Ill_breakscan11_1997:HG2_Ill_SpiralSDKrefine_4254:HG2_Ill_MetaSV_1232:HG2_Ill_GATKHCSBGrefine_9337;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9741:HG4_PB_pbsv_13989:HG4_PB_SVrefine2PBcRDovetail_6988:HG4_PB_SVrefine2Falcon1Dovetail_8533:HG4_Ill_SVrefine2DISCOVARDovetail_9920:HG4_Ill_MetaSV_1308:HG4_Ill_GATKHCSBGrefine_9636:HG4_10X_allpass_2617:HG3_PB_SVrefine2Falcon1Dovetail_8483:HG3_Ill_MetaSV_1356:HG3_Ill_GATKHCSBGrefine_9247:HG2_PB_pbsv_14014:HG2_PB_SVrefine2PBcRplusDovetail_2811:HG2_PB_SVrefine2PB10Xhap12_10119:HG2_PB_SVrefine2Falcon2Bionano_6976:HG2_PB_SVrefine2Falcon1plusDovetail_2954:HG2_Ill_breakscan11_1997:HG2_Ill_SpiralSDKrefine_4254:HG2_Ill_MetaSV_1232:HG2_Ill_GATKHCSBGrefine_9337;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0176078;ClusterMaxSizeDiff=0.0176078;ClusterMaxEditDist=0.0176078;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1653;DistBack=13569;DistForward=-1642;DistMin=-1642;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=13:43539795-43541462;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=935.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:22:0|1:46:0:1:25:1|0:1:25:35:0:0/1:20:22:0/1:140:60:1518:.:.
chr13	45256561	HG2_Ill_GATKHCSBGrefine_9340	CCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGAGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9744:HG4_PB_SVrefine2Falcon1Dovetail_8540:HG4_PB_assemblyticsfalcon_6764:HG2_PB_assemblyticsfalcon_6855:HG3_PB_assemblyticsfalcon_6868:HG2_PB_pbsv_14022:HG3_PB_pbsv_13713:HG3_Ill_svaba_17642:HG3_Ill_Krunchall_18670:HG3_Ill_GATKHCSBGrefine_9250:HG3_Ill_250bpfermikitraw_18185:HG3_Ill_150bpfermikitraw_17678:HG2_Ill_svaba_17481:HG2_Ill_Krunchall_19050:HG2_Ill_GATKHC_22396:HG2_Ill_GATKHCSBGrefine_9340:HG2_Ill_250bpfermikitraw_18713:HG2_Ill_150bpfermikitraw_17643:HG2_10X_allpass_2231;NumClusterSVs=19;ExactMatchIDs=HG2_10X_allpass_2231:HG2_Ill_150bpfermikitraw_17643:HG2_Ill_250bpfermikitraw_18713:HG2_Ill_GATKHCSBGrefine_9340:HG2_Ill_GATKHC_22396:HG2_Ill_Krunchall_19050:HG2_Ill_svaba_17481:HG3_Ill_150bpfermikitraw_17678:HG3_Ill_250bpfermikitraw_18185:HG3_Ill_GATKHCSBGrefine_9250:HG3_Ill_Krunchall_18670:HG3_Ill_svaba_17642;NumExactMatchSVs=12;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.345238;PBcalls=6;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-78;DistBack=-278;DistForward=916;DistMin=-278;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=13:45256558-45256666;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=936.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:23:1|0:1:15:29:1:./.:33:1:1:7:0/1:29:15:./.:.:.:.:.:.
chr13	46005184	HG2_PB_SVrefine2Falcon1plusDovetail_2962	GTTTTTGTTTTTGTTTGAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTTGGCTCACCGCAACCTCTGCCTCCAGGATTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAAGCATGTACCACCACACCCGGCTAATTTTGTATTTTCAGTAGAGACAGGGTTTCACCATGTTGCCTAGGCTGGTCTCGAACTCCTAGCCTCAAGTGATCTGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTGCACTCAAAACAAAACAAAACAAAAACACAAAGAAAAAAAAACAAAGAGTATGGTTTGATTGAAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9748:HG4_Ill_GATKHCSBGrefine_9645:HG3_Ill_GATKHCSBGrefine_9253:HG2_Ill_GATKHCSBGrefine_9343:HG4_PB_HySA_20429:HG2_PB_HySA_25567:HG3_PB_HySA_21136:HG2_Ill_tnscope_1544:HG4_Ill_manta_3285:HG3_Ill_manta_3157:HG2_PB_PB10Xdip_8854:HG2_Ill_manta_3866:HG2_Ill_SVrefine2DISCOVARplusDovetail_3268:HG4_Ill_MetaSV_1313:HG3_Ill_MetaSV_1358:HG2_Ill_MetaSV_1234:HG4_10X_allpass_2621:HG3_10X_allpass_2721:HG2_10X_allpass_2232:HG4_PB_pbsv_14000:HG3_PB_pbsv_13720:HG2_PB_pbsv_14029:HG4_PB_SVrefine2Falcon1Dovetail_8543:HG4_Ill_SVrefine2DISCOVARDovetail_9928:HG3_PB_SVrefine2Falcon1Dovetail_8492:HG3_Ill_SVrefine2DISCOVARDovetail_10093:HG2_PB_SVrefine2PBcRplusDovetail_2819:HG2_PB_SVrefine2PB10Xhap12_10127:HG2_PB_SVrefine2Falcon2Bionano_6982:HG2_PB_SVrefine2Falcon1plusDovetail_2962:HG2_Ill_SVrefine2DISCOVARplusDovetail_3267;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9748:HG4_PB_SVrefine2Falcon1Dovetail_8543:HG4_Ill_SVrefine2DISCOVARDovetail_9928:HG3_PB_SVrefine2Falcon1Dovetail_8492:HG3_Ill_SVrefine2DISCOVARDovetail_10093:HG2_PB_SVrefine2PBcRplusDovetail_2819:HG2_PB_SVrefine2PB10Xhap12_10127:HG2_PB_SVrefine2Falcon2Bionano_6982:HG2_PB_SVrefine2Falcon1plusDovetail_2962:HG2_Ill_SVrefine2DISCOVARplusDovetail_3267;NumExactMatchSVs=10;ClusterMaxShiftDist=0.132921;ClusterMaxSizeDiff=0.132921;ClusterMaxEditDist=0.190923;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=3310;DistForward=-143;DistMin=-143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2827;REFWIDENED=13:46002630-46015241;PctSeqSimilarity=0.933;PctSizeSimilarity=0.997;PctRecOverlap=0.4053;SizeDiff=-1;StartDistance=-200;EndDistance=-201;GTMatch=0;TruScore=77;MatchId=937.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:3:47:1/1:0:22:0:6:./.:9:0:3:0:./.:32:4:0/0:29:1:.:.:.
chr13	47225840	HG2_Ill_SVrefine2DISCOVARplusDovetail_3275	TTTTTTTTTTTTTTGATATGCAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGCCATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCGGCCACCAGGCCTGCTGATGTTTTGTTTTTTTTGTTTTGTTTTG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10135:HG2_PB_pbsv_14043:HG4_10X_allpass_2622:HG4_PB_pbsv_14011:HG4_Ill_SVrefine2DISCOVARDovetail_9934:HG2_PB_SVrefine2Falcon1plusDovetail_2968:HG2_Ill_SVrefine2DISCOVARplusDovetail_3275:HG2_10X_SVrefine210Xhap12_9753;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9753:HG2_Ill_SVrefine2DISCOVARplusDovetail_3275:HG2_PB_SVrefine2Falcon1plusDovetail_2968:HG4_Ill_SVrefine2DISCOVARDovetail_9934;NumExactMatchSVs=4;ClusterMaxShiftDist=0.016;ClusterMaxSizeDiff=0.0159151;ClusterMaxEditDist=0.0954907;PBcalls=4;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-187;DistBack=1134;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=365;REFWIDENED=13:47225841-47226392;PctSeqSimilarity=0.9581;PctSizeSimilarity=0.9894;PctRecOverlap=0.0579;SizeDiff=-2;StartDistance=-177;EndDistance=-179;GTMatch=0;TruScore=66;MatchId=938.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:22:./.:18:14:9:8:0/0:25:0:13:0:0/0:19:0:./.:.:.:.:.:.
chr13	47689476	HG3_10X_allpass_2723	GATCTGCTAGAGTGAGGCCGGGCGCGGTGGCTCGCGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCGGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATAAAAAAAATTAGCCGGGCGAGGGGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2000:HG3_PB_assemblyticsfalcon_6890:HG2_PB_assemblyticsfalcon_6881:HG2_PB_assemblyticsPBcR_6636:HG2_PB_HySA_25589:HG4_Ill_Krunchall_19387:HG3_Ill_Krunchall_18697:HG2_Ill_Krunchall_19078:HG4_PB_assemblyticsfalcon_6783:HG2_PB_pbsv_14045:HG3_PB_pbsv_13733:HG4_PB_pbsv_14014:HG3_PB_HySA_21155:HG3_Ill_MetaSV_1364:HG2_Ill_tnscope_1545:HG2_Ill_MetaSV_1238:HG4_PB_SVrefine2PBcRDovetail_6999:HG4_Ill_manta_3288:HG4_Ill_SVrefine2DISCOVARDovetail_9939:HG4_Ill_MetaSV_1320:HG4_Ill_GATKHCSBGrefine_9653:HG3_PB_SVrefine2PBcRDovetail_6610:HG3_Ill_scalpel_13485:HG3_Ill_manta_3160:HG3_Ill_GATKHCSBGrefine_9261:HG3_10X_allpass_2723:HG2_PB_SVrefine2PB10Xhap12_10137:HG2_PB_SVrefine2Falcon2Bionano_6987:HG2_PB_SVrefine2Falcon1plusDovetail_2970:HG2_Ill_scalpel_13232:HG2_Ill_manta_3867:HG2_Ill_SpiralSDKrefine_4282:HG2_Ill_SVrefine2DISCOVARplusDovetail_3277:HG2_Ill_GATKHCSBGrefine_9350:HG2_10X_allpass_2233:HG2_10X_SVrefine210Xhap12_9756;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9756:HG2_10X_allpass_2233:HG2_Ill_GATKHCSBGrefine_9350:HG2_Ill_SVrefine2DISCOVARplusDovetail_3277:HG2_Ill_SpiralSDKrefine_4282:HG2_Ill_manta_3867:HG2_Ill_scalpel_13232:HG2_PB_SVrefine2Falcon1plusDovetail_2970:HG2_PB_SVrefine2Falcon2Bionano_6987:HG2_PB_SVrefine2PB10Xhap12_10137:HG3_10X_allpass_2723:HG3_Ill_GATKHCSBGrefine_9261:HG3_Ill_manta_3160:HG3_Ill_scalpel_13485:HG3_PB_SVrefine2PBcRDovetail_6610:HG4_Ill_GATKHCSBGrefine_9653:HG4_Ill_MetaSV_1320:HG4_Ill_SVrefine2DISCOVARDovetail_9939:HG4_Ill_manta_3288:HG4_PB_SVrefine2PBcRDovetail_6999;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0876623;ClusterMaxSizeDiff=0.0876623;ClusterMaxEditDist=0.0876623;PBcalls=14;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=50550;DistForward=7497;DistMin=7497;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=13:47689477-47689804;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=939.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:1:19:0:27:1/1:0:16:0:16:1/1:0:40:./.:2:10:.:.:0.62218
chr13	48015694	HG3_Ill_250bpfermikitraw_18213	TATGTACATATATCATATGTACAATTCATGTACATATATCATATGTACAATTCATGTACATATATCATATGTACAATTCATGTACATATATCATATGTACAATTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9757:HG4_PB_HySA_20445:HG3_PB_HySA_21158:HG4_Ill_Krunchall_19389:HG2_PB_assemblyticsfalcon_6882:HG2_PB_SVrefine2Falcon1plusDovetail_2971:HG2_PB_pbsv_14047:HG4_PB_pbsv_14015:HG3_PB_pbsv_13735:HG2_PB_HySA_25591:HG3_Ill_MetaSV_1365:HG4_PB_SVrefine2PBcRDovetail_7000:HG4_Ill_svaba_17539:HG4_Ill_manta_3289:HG4_Ill_SVrefine2DISCOVARDovetail_9940:HG4_Ill_GATKHCSBGrefine_9655:HG4_Ill_250bpfermikitraw_18499:HG4_Ill_150bpfermikitraw_17811:HG4_10X_allpass_2624:HG3_PB_assemblyticsfalcon_6892:HG3_PB_SVrefine2PBcRDovetail_6611:HG3_Ill_svaba_17666:HG3_Ill_manta_3162:HG3_Ill_Krunchall_18701:HG3_Ill_GATKHCSBGrefine_9264:HG3_Ill_250bpfermikitraw_18213:HG3_Ill_150bpfermikitraw_17709:HG3_10X_allpass_2725:HG2_PB_SVrefine2PB10Xhap12_10138:HG2_PB_SVrefine2Falcon2Bionano_6988:HG2_Ill_svaba_17507:HG2_Ill_manta_3869:HG2_Ill_SpiralSDKrefine_4285:HG2_Ill_SVrefine2DISCOVARplusDovetail_3279:HG2_Ill_GATKHCSBGrefine_9353:HG2_Ill_250bpfermikitraw_18744:HG2_Ill_150bpfermikitraw_17675:HG2_10X_allpass_2234;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9757:HG4_PB_SVrefine2PBcRDovetail_7000:HG4_Ill_svaba_17539:HG4_Ill_manta_3289:HG4_Ill_SVrefine2DISCOVARDovetail_9940:HG4_Ill_GATKHCSBGrefine_9655:HG4_Ill_250bpfermikitraw_18499:HG4_Ill_150bpfermikitraw_17811:HG4_10X_allpass_2624:HG3_PB_assemblyticsfalcon_6892:HG3_PB_SVrefine2PBcRDovetail_6611:HG3_Ill_svaba_17666:HG3_Ill_manta_3162:HG3_Ill_Krunchall_18701:HG3_Ill_GATKHCSBGrefine_9264:HG3_Ill_250bpfermikitraw_18213:HG3_Ill_150bpfermikitraw_17709:HG3_10X_allpass_2725:HG2_PB_SVrefine2PB10Xhap12_10138:HG2_PB_SVrefine2Falcon2Bionano_6988:HG2_Ill_svaba_17507:HG2_Ill_manta_3869:HG2_Ill_SpiralSDKrefine_4285:HG2_Ill_SVrefine2DISCOVARplusDovetail_3279:HG2_Ill_GATKHCSBGrefine_9353:HG2_Ill_250bpfermikitraw_18744:HG2_Ill_150bpfermikitraw_17675:HG2_10X_allpass_2234;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0192308;PBcalls=13;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=19;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-104;DistBack=182040;DistForward=-44;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=62;REFWIDENED=13:48015695-48015860;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=940.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:1/1:2:18:0:30:1/1:0:8:0:14:1/1:0:52:./.:.:.:.:.:.
chr13	49305732	HG3_Ill_manta_3164	TCTTTGAGTCCTCAATCATTTTTAAGAGTGCAAAGAGGTCTTAAGACCAAAATGATCGCAATCTG	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_6892:HG4_PB_HySA_20454:HG3_PB_HySA_21167:HG4_PB_pbsv_14018:HG3_PB_pbsv_13739:HG2_PB_pbsv_14052:HG2_PB_HySA_25600:HG4_PB_SVrefine2PBcRDovetail_7003:HG4_Ill_svaba_17547:HG4_Ill_scalpel_12941:HG4_Ill_manta_3292:HG4_Ill_SVrefine2DISCOVARDovetail_9945:HG4_Ill_Krunchall_19398:HG4_Ill_GATKHCSBGrefine_9659:HG4_Ill_250bpfermikitraw_18507:HG4_Ill_150bpfermikitraw_17819:HG3_PB_SVrefine2PBcRDovetail_6613:HG3_Ill_svaba_17674:HG3_Ill_manta_3164:HG3_Ill_Krunchall_18710:HG3_Ill_250bpfermikitraw_18220:HG2_PB_SVrefine2PB10Xhap12_10139:HG2_Ill_svaba_17515:HG2_Ill_manta_3872:HG2_Ill_SpiralSDKrefine_4290:HG2_Ill_Krunchall_19086:HG2_Ill_GATKHCSBGrefine_9357:HG2_Ill_250bpfermikitraw_18750;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18750:HG2_Ill_GATKHCSBGrefine_9357:HG2_Ill_Krunchall_19086:HG2_Ill_SpiralSDKrefine_4290:HG2_Ill_manta_3872:HG2_Ill_svaba_17515:HG2_PB_SVrefine2PB10Xhap12_10139:HG3_Ill_250bpfermikitraw_18220:HG3_Ill_Krunchall_18710:HG3_Ill_manta_3164:HG3_Ill_svaba_17674:HG3_PB_SVrefine2PBcRDovetail_6613:HG4_Ill_150bpfermikitraw_17819:HG4_Ill_250bpfermikitraw_18507:HG4_Ill_GATKHCSBGrefine_9659:HG4_Ill_Krunchall_19398:HG4_Ill_SVrefine2DISCOVARDovetail_9945:HG4_Ill_manta_3292:HG4_Ill_scalpel_12941:HG4_Ill_svaba_17547:HG4_PB_SVrefine2PBcRDovetail_7003;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.0472441;PBcalls=10;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-64;DistBack=25596;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=66;REFWIDENED=13:49305733-49305862;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=942.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:47:0|1:33:2:4:42:1|0:0:7:20:1:0/1:24:26:./.:.:.:.:.:.
chr13	49309951	HG3_10X_allpass_2726	AGAGAACCCACTAGTAAAGCACAGCTCAAGAATTAGTGGCAAACAGATGCACACTCAGAACATTGTTTTAGCTGATGGGAGAGAATGGAAGGAAGAAGGCATCTGTGAAG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_935:HG3_PB_HySA_21168:HG2_PB_assemblyticsfalcon_6893:HG4_Ill_Spiral_1094:HG4_PB_pbsv_14019:HG2_PB_SVrefine2Falcon1plusDovetail_2973:HG2_PB_pbsv_14053:HG3_PB_pbsv_13740:HG4_PB_HySA_20455:HG2_PB_HySA_25601:HG4_Ill_MetaSV_1322:HG4_PB_SVrefine2PBcRDovetail_7004:HG4_Ill_svaba_17548:HG4_Ill_SVrefine2DISCOVARDovetail_9946:HG4_Ill_GATKHCSBGrefine_9660:HG4_Ill_250bpfermikitraw_18508:HG4_Ill_150bpfermikitraw_17820:HG3_PB_SVrefine2PBcRDovetail_6614:HG3_10X_allpass_2726:HG2_PB_SVrefine2PB10Xhap12_10140:HG2_Ill_SVrefine2DISCOVARplusDovetail_3285:HG2_10X_SVrefine210Xhap12_9760;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9760:HG2_Ill_SVrefine2DISCOVARplusDovetail_3285:HG2_PB_SVrefine2PB10Xhap12_10140:HG3_10X_allpass_2726:HG3_PB_SVrefine2PBcRDovetail_6614:HG4_Ill_150bpfermikitraw_17820:HG4_Ill_250bpfermikitraw_18508:HG4_Ill_GATKHCSBGrefine_9660:HG4_Ill_SVrefine2DISCOVARDovetail_9946:HG4_Ill_svaba_17548:HG4_PB_SVrefine2PBcRDovetail_7004;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0276498;PBcalls=11;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-109;DistBack=-110;DistForward=32;DistMin=-110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=113;REFWIDENED=13:49309952-49310173;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=943.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:50:0|1:38:1:0:48:./.:0:4:20:0:0/1:26:24:./.:.:.:.:.:.
chr13	49533514	HG2_PB_SVrefine2PB10Xhap12_10142	GTTTTGTTGGTTATCTTCATCTTGCTCTCTGACTATATTTGCCCCCCCCCCAAGCTAGATTATAAATACTTCGAGGGCTGTATCGCTTACATTTCATTGAATTTTCCCAAAGTGTCTCCCAATCCACTGTTGTTATGTAACTTCAGGGAGTTCCATTTCCCTAAAACCCAAAGAGGTTGCATTGCAGTAGCCCTGCTGATCTTCACAGTGATTACTGTATATTTCAGTACATGTTTTCTTTAGAACTACATTGTCATTGATTCTTTAATCAGTGTCCCTTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTCAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTACAGACGGGGTTTCACTGTTTTATCCAGGATGGTCTCGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGACCACAGGCGTGAGACACTGCGCCCGGCCTGTCCCTTTCTTCTTAAACATATTGATAATATTGTGGCTTTCTGTGTTTAACAGTAGAAAGGTTTAAAAATGGACACTTGTAAAATAGATGGAACAAGAGAGAGAAATTCTGCCAGGGATCCCTCAGTTTCAGACAGGCTCTAGATACCAAACAAGAGAGCTACCCTAAAGCTCCAGCCTTAGAAGAGGGTACCTGGGTAGGTAGAACCACTAAACCAAGACAGGAGAATGATGAGAATTCAAGTCGTTTTACCCTAACAACAATCACTTTATTGTGTATCATGATGTTGTATGTCAGGATTTAGGTGGGTCATTCATCTGTCCCATGTAGAGTTGACAGAGATCATTTGGTGGCAGTCTGCTGGCCAAGAGGCTGGTTTCGAGAGTCCAAGATGGCTTCCATTACTGACCTGTACATCGGTGGGGTGACTGGAAGGCTAGACGCAGGTTTGGTATGCACCTATATGTGGCCTTCACAGCATCATGGTCCAGTAAGACCTTACCATGGCAACTTAGAGCTCCAGGGAGTAGTCCAAGAGCTCAAGTGCTTTCTGATGACTTAAAATCCTGTCCTTTGCTTTATCCTCTCAAATTGTTACTTGATTAAATAAAATTCTTAGGAAAAATGTTTTATGTTTAGTAAGAACATTCTTACTATTACTCTACTTTTAAAAAAAAAAGTACTGTTTTTATTTTTGATATCGTAAAGATCATACATTCACAGTCATTTGGAAATGCAAGCAATATATAAAATTACATGACACATAGTAAAAGTCATCTTAAATCCTACCACAGTTAGTTATTGGAGGCTATAGTAAACATTGTTTAGGCAGCTGTATATGTGTATAAATATATATATATACACATACATACATATATGAATGACTTTTATAAGTGAGACATTAATTTATATGCTATTTTATAACCGTTTTTCACTTAACGATATGTCATGGTGCTCTTTTGGTGCCAATCAAGGTAGACAAACAGCATCCTTTTTAATATTCATATATTACTATGTAATATAAAATAATTTATCTAATCAATCTCCTATTTGCAGATATAAGACGTAATTTCTTTTAATGAAATATTTTTGGGCATCAAGTATTTCAGAGAAAACCCAGTCAAAATACAGCCATTTATTTTATTTTATCAAATAAGTTACATGGCTAAAGTGTGATGAGGTTTTAAGTAAGTTTAGGGATGGAGAAGCCAGATAGAATAGTCTGTTTTAGTCAAATAGGCAACCAAATAATAGGCAGTTCTTTAGTTTGTTTTCTGCTATACTAACGTAGGTTAACTAATACCCTAGACATTGATGAGGCAAAATAACTATCAGTCAACGTTTGCATTATACTGTGAAACCTGACAGAGGGAATGAGAGGGAGAAGAGGAGGAGGATAAAGAGAAGAAGAAGGAGGAAGAGGGGAAAAGGAGAGAAGGAAGGAAAGAAAGGAGGGAAGAAGGAAGAAAGGAAGGGGGGTCTGTCAGAATCTGAGTGCTAAAATTTTTTTTTAATTTAAAAAAAAGAAAGGAAGGAAGGGTAACTTAAATGAATCAGTGTTTCATTTTCATCTAGTTACAAGAAATAGGGAAGTAAAAAGTTCAGGGTTGGTCAGCAGCTCCACAATGGGGTCAGGACTCAGACTCCTTGTATCTTTTCACTCAACCATCCTACGTTGCACATCATCTTGTGGCCCCAGTGTGGCCACTTCACATCCCAACATTGTGTCCATGTTCCAGATAGGAAGGGGAAGGTGAAAGGGAAAAGGACAAAAATGCGCAAACCAGCTAAATCAGTACTCCTTCTAAGAGGTCTTCCTGGAAGGCCTATCCAGTAATTTCTGTTCACAGCTCAGAGCTGGGTGACAAGGTTGCCCTTATTTGCAAGAAGACTGGGAAATATAGGTTTTTGTTTTGCTTTGTTTTGTTTTTATGGCTCGTATGTAAGAAGGGGAAAATGCATATGGGGTGGCAACTATCTCTGCCACATTAATTAACATAGGACATTTCTTATAATATGTAGGTGCATATACATGTTTATATTCCCAAGAAATTTGACCTAAGAGAAGAAAAGGTAAAATGAGTAACACTCTTATTTAACTAAGAAGTCTGAATCTACAAGAGATTCATTTTAAAATAAGTCTGTGAGAATTCTCAATGAAAAGAGAATTTCTTCATTTTCAGTTCAAGTTAACTACCTGAGATGTAGGTGGGAAGAAAACTACAATGAATAGAAATAGCCACCGTCCTTGAGGATTTCAGTGTAGTGATGTCAACATTTGAACAAATAATTATAATTTCATACAAAAAAATCTCTATTGCACTGAGAAATGTATAAAGGACTGTGGAAAGAGTGGGCAGGCTTTGGGAAGGCATAAATGTGGAGGAGTCTACTTGTGCTCTAGGCTTAACAGATAAGAAAAACGTACCAAGGAAATGAAATAAGAGAAGGACTTTTCAGAGCAATGGAGCAGTAAAGTGCAATCACGTGCTGACTAGTGCCTTTAAAACGTTGTAC	AAAAAAAA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1241:HG3_PB_pbsv_13742:HG2_PB_pbsv_14055:HG3_PB_SVrefine2PBcRDovetail_6616:HG2_PB_assemblyticsPBcR_6648:HG2_PB_SVrefine2PB10Xhap12_10142:HG3_PB_assemblyticsfalcon_6901:HG3_Ill_MetaSV_1367:HG3_PB_HySA_21169:HG2_10X_allpass_2235:HG3_10X_allpass_2727;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10142:HG2_PB_assemblyticsPBcR_6648:HG3_PB_SVrefine2PBcRDovetail_6616;NumExactMatchSVs=3;ClusterMaxShiftDist=0.179355;ClusterMaxSizeDiff=0.179355;ClusterMaxEditDist=0.179355;PBcalls=7;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-3100;DistBack=-1260;DistForward=-1838;DistMin=-1838;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=13:49533514-49536621;PctSeqSimilarity=0.9417;PctSizeSimilarity=0.9987;PctRecOverlap=0.9961;SizeDiff=4;StartDistance=1;EndDistance=12;GTMatch=0;TruScore=97;MatchId=944.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:54:./.:14:10:17:18:0|1:70:0:0:5:0/0:54:2:0/1:249:98:3412:.:.
chr13	49951395	HG2_PB_SVrefine2PB10Xhap12_10144	TACAAACAAACAAAAACAGTGAGGGGAATCACCATGTTTGGGTGGACCTAGTTTCTAATGGCTTGCATTTACATATCAAAGGTTGCCAGCCTGGCTCTAAGAGCCGGGGCTATACAAGAAACTTTTTCGGCTCTCCCTCTCCCTCTCCCTCTCCCTCTGTCTCCCTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCCAGTGCCTGCCATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCAGGTCTCCAGCCCCTAACCGCGAGTGATCCCGCCAACCTCAGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTACACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCTTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGTGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCCGACCGGCAGCCACCCCGTCAGGGAGGGAGGTGGGGGGGGGTCAACCCCCCGCCCGGCCAGCCGCCCCATCTGGGAGGGAGGTGGGGGGTCAGCCCCCCCGACCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCACCTGGCCAGCCGTGCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCGGGAGGTGAGGGGTGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCTGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCAGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCCCGCCCGGCCAGCTGCCCCGTCCGAGAGGGAGGTGGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCAGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCGTGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTTAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_19406:HG2_PB_pbsv_14057:HG3_10X_allpass_2728:HG2_10X_allpass_2236:HG4_PB_pbsv_14023:HG3_Ill_Krunchall_18714:HG2_Ill_Krunchall_19089:HG4_10X_allpass_2626:HG4_PB_assemblyticsfalcon_6798:HG2_PB_assemblyticsfalcon_6900:HG3_PB_assemblyticsfalcon_6905:HG2_PB_assemblyticsPBcR_6654:HG3_PB_HySA_21174:HG4_Ill_GATKHCSBGrefine_9664:HG3_Ill_GATKHCSBGrefine_9271:HG2_PB_HySA_25609:HG2_Ill_GATKHCSBGrefine_9361:HG2_Ill_tnscope_1546:HG4_PB_SVrefine2PBcRDovetail_7007:HG4_Ill_SVrefine2DISCOVARDovetail_9949:HG3_PB_pbsv_13745:HG3_PB_SVrefine2PBcRDovetail_6619:HG2_PB_SVrefine2PB10Xhap12_10144:HG2_PB_SVrefine2Falcon2Bionano_6991:HG2_PB_SVrefine2Falcon1plusDovetail_2976:HG2_Ill_SVrefine2DISCOVARplusDovetail_3289:HG2_10X_SVrefine210Xhap12_9763:HG2_Ill_MetaSV_1242:HG3_Ill_MetaSV_1368:HG4_Ill_MetaSV_1325;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9763:HG2_Ill_SVrefine2DISCOVARplusDovetail_3289:HG2_PB_SVrefine2Falcon1plusDovetail_2976:HG2_PB_SVrefine2Falcon2Bionano_6991:HG2_PB_SVrefine2PB10Xhap12_10144:HG3_PB_SVrefine2PBcRDovetail_6619:HG3_PB_pbsv_13745:HG4_Ill_SVrefine2DISCOVARDovetail_9949:HG4_PB_SVrefine2PBcRDovetail_7007;NumExactMatchSVs=9;ClusterMaxShiftDist=0.157397;ClusterMaxSizeDiff=0.157397;ClusterMaxEditDist=0.157397;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2461;DistBack=338;DistForward=25998;DistMin=338;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=13:49951396-49953875;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.9976;SizeDiff=0;StartDistance=-6;EndDistance=-6;GTMatch=0;TruScore=99;MatchId=945.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:131:1/1:0:32:0:31:1/1:2:25:1:25:1/1:0:18:1/1:1:190:2532:.:.
chr13	51551934	HG2_10X_allpass_2239	TCCCAGTTAATGCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_937:HG3_PB_assemblyticsfalcon_6913:HG2_PB_assemblyticsfalcon_6911:HG2_PB_assemblyticsPBcR_6664:HG2_Ill_Krunchall_19097:HG3_PB_pbsv_13753:HG2_PB_pbsv_14064:HG3_PB_HySA_21187:HG2_PB_HySA_25620:HG3_Ill_MetaSV_1370:HG2_Ill_MetaSV_1243:HG3_PB_SVrefine2PBcRDovetail_6626:HG3_PB_SVrefine2Falcon1Dovetail_8499:HG3_Ill_scalpel_13507:HG3_Ill_manta_3168:HG3_Ill_GATKHCSBGrefine_9274:HG3_10X_allpass_2731:HG2_PB_SVrefine2PB10Xhap12_10150:HG2_PB_SVrefine2Falcon1plusDovetail_2982:HG2_Ill_scalpel_13248:HG2_Ill_manta_3875:HG2_Ill_breakscan11_2001:HG2_Ill_SpiralSDKrefine_4300:HG2_Ill_SVrefine2DISCOVARplusDovetail_3301:HG2_Ill_GATKHCSBGrefine_9364:HG2_10X_allpass_2239:HG2_10X_SVrefine210Xhap12_9769:HG3_Ill_Spiral_14605:HG2_Ill_tnscope_1547;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9769:HG2_10X_allpass_2239:HG2_Ill_GATKHCSBGrefine_9364:HG2_Ill_SVrefine2DISCOVARplusDovetail_3301:HG2_Ill_SpiralSDKrefine_4300:HG2_Ill_breakscan11_2001:HG2_Ill_manta_3875:HG2_Ill_scalpel_13248:HG2_PB_SVrefine2Falcon1plusDovetail_2982:HG2_PB_SVrefine2PB10Xhap12_10150:HG3_10X_allpass_2731:HG3_Ill_GATKHCSBGrefine_9274:HG3_Ill_manta_3168:HG3_Ill_scalpel_13507:HG3_PB_SVrefine2Falcon1Dovetail_8499:HG3_PB_SVrefine2PBcRDovetail_6626;NumExactMatchSVs=16;ClusterMaxShiftDist=0.102484;ClusterMaxSizeDiff=0.102484;ClusterMaxEditDist=0.102484;PBcalls=11;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=40591;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=13:51551935-51552280;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=946.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:24:0|1:28:2:0:29:0|1:49:0:0:30:0/1:28:19:0/1:26:7:.:.:.
chr13	51652338	HG4_Ill_GATKHCSBGrefine_9669	CCCCCCGCCTGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCAGCCAGCCGCCCCATCCAGGAGGGAGGTGGGGGGGTCAG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10151:HG4_PB_pbsv_14034:HG2_PB_pbsv_14066:HG4_PB_SVrefine2PBcRDovetail_7012:HG4_Ill_MetaSV_1330:HG4_Ill_GATKHCSBGrefine_9669:HG4_Ill_250bpfermikitraw_18525:HG2_PB_SVrefine2Falcon2Bionano_6996:HG2_Ill_GATKHCSBGrefine_9366:HG2_10X_SVrefine210Xhap12_9771:HG2_PB_PB10Xdip_8913;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9771:HG2_Ill_GATKHCSBGrefine_9366:HG2_PB_SVrefine2Falcon2Bionano_6996:HG4_Ill_250bpfermikitraw_18525:HG4_Ill_GATKHCSBGrefine_9669:HG4_Ill_MetaSV_1330:HG4_PB_SVrefine2PBcRDovetail_7012;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.0515464;PBcalls=6;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-96;DistBack=-94;DistForward=82826;DistMin=-94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=76;REFWIDENED=13:51652300-51652471;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=947.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:27:0|1:37:1:2:24:./.:0:3:23:0:0/1:26:11:./.:.:.:.:.:.
chr13	54524065	HG2_PB_SVrefine2Falcon1plusDovetail_2989	TTATTTTCATATGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1247:HG2_10X_allpass_2240:HG3_PB_assemblyticsfalcon_6926:HG2_PB_assemblyticsfalcon_6924:HG2_PB_assemblyticsPBcR_6680:HG3_Ill_Krunchall_18737:HG2_Ill_Krunchall_19103:HG2_PB_pbsv_14076:HG3_PB_pbsv_13763:HG2_PB_SVrefine2PB10Xhap12_10161:HG2_Ill_breakscan11_2002:HG3_PB_HySA_21206:HG4_PB_SVrefine2Falcon1Dovetail_8553:HG3_PB_SVrefine2PBcRDovetail_6632:HG3_PB_SVrefine2Falcon1Dovetail_8505:HG3_Ill_scalpel_13514:HG3_Ill_manta_3171:HG3_Ill_SVrefine2DISCOVARDovetail_10100:HG3_Ill_GATKHCSBGrefine_9283:HG3_10X_allpass_2732:HG2_PB_SVrefine2PBcRplusDovetail_2825:HG2_PB_SVrefine2PB10Xhap12_10160:HG2_PB_SVrefine2Falcon2Bionano_7002:HG2_PB_SVrefine2Falcon1plusDovetail_2989:HG2_PB_HySA_25645:HG2_Ill_GATKHCSBGrefine_9368:HG2_10X_SVrefine210Xhap12_9782:HG3_Ill_Spiral_14615:HG3_Ill_MetaSV_1374:HG2_Ill_tnscope_1548:HG2_Ill_Spiral_938;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9782:HG2_Ill_GATKHCSBGrefine_9368:HG2_PB_HySA_25645:HG2_PB_SVrefine2Falcon1plusDovetail_2989:HG2_PB_SVrefine2Falcon2Bionano_7002:HG2_PB_SVrefine2PB10Xhap12_10160:HG2_PB_SVrefine2PBcRplusDovetail_2825:HG3_10X_allpass_2732:HG3_Ill_GATKHCSBGrefine_9283:HG3_Ill_SVrefine2DISCOVARDovetail_10100:HG3_Ill_manta_3171:HG3_Ill_scalpel_13514:HG3_PB_SVrefine2Falcon1Dovetail_8505:HG3_PB_SVrefine2PBcRDovetail_6632:HG4_PB_SVrefine2Falcon1Dovetail_8553;NumExactMatchSVs=15;ClusterMaxShiftDist=0.161339;ClusterMaxSizeDiff=0.161339;ClusterMaxEditDist=0.161339;PBcalls=15;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=79810;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=13:54524066-54524408;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=948.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:36:0|1:33:3:1:32:0|1:44:0:0:28:0/1:19:32:0/1:24:7:.:.:.
chr13	55634082	HG2_PB_SVrefine2PBcRplusDovetail_2827	AACATCAGGAAGCCATTAGGAGATTATTATTGGCTGTACAGAAACCTAAAGAGGTGGCAGTCTTACACTGCCGGGGTCATCAGAAAGGAAAGGAAAGGGAAATAGAAGGGAACTGCCAAGCAGATATTGAAGCCAAAAGAGCTGCAAGGAAGCCATTAGGAGATTATTATTGGCTGTACAGAAACCTAAAGAGGTGGCAGTCTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9785:HG3_PB_SVrefine2Falcon1Dovetail_8507:HG2_PB_SVrefine2Falcon1plusDovetail_2991:HG3_PB_pbsv_13766:HG2_PB_pbsv_14079:HG4_PB_pbsv_14050:HG4_Ill_GATKHCSBGrefine_9674:HG3_Ill_GATKHCSBGrefine_9285:HG2_Ill_GATKHCSBGrefine_9370:HG4_Ill_MetaSV_1337:HG3_Ill_MetaSV_1375:HG4_PB_SVrefine2PBcRDovetail_7022:HG4_PB_SVrefine2Falcon1Dovetail_8555:HG4_Ill_SVrefine2DISCOVARDovetail_9967:HG3_PB_assemblyticsfalcon_6932:HG3_PB_SVrefine2PBcRDovetail_6634:HG3_Ill_SVrefine2DISCOVARDovetail_10102:HG3_10X_allpass_2733:HG2_PB_assemblyticsfalcon_6932:HG2_PB_SVrefine2PBcRplusDovetail_2827:HG2_PB_SVrefine2PB10Xhap12_10163:HG2_PB_SVrefine2Falcon2Bionano_7004:HG2_Ill_SVrefine2DISCOVARplusDovetail_3313;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9785:HG4_PB_SVrefine2PBcRDovetail_7022:HG4_PB_SVrefine2Falcon1Dovetail_8555:HG4_Ill_SVrefine2DISCOVARDovetail_9967:HG3_PB_assemblyticsfalcon_6932:HG3_PB_SVrefine2PBcRDovetail_6634:HG3_Ill_SVrefine2DISCOVARDovetail_10102:HG3_10X_allpass_2733:HG2_PB_assemblyticsfalcon_6932:HG2_PB_SVrefine2PBcRplusDovetail_2827:HG2_PB_SVrefine2PB10Xhap12_10163:HG2_PB_SVrefine2Falcon2Bionano_7004:HG2_Ill_SVrefine2DISCOVARplusDovetail_3313;NumExactMatchSVs=13;ClusterMaxShiftDist=0.044665;ClusterMaxSizeDiff=0.044665;ClusterMaxEditDist=0.0451128;PBcalls=13;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-203;DistBack=4326;DistForward=-149;DistMin=-149;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=148;REFWIDENED=13:55634083-55634433;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=949.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:./.:0:0:0:0:./.:0:0:0:0:1/1:0:27:./.:.:.:.:.:.
chr13	55941178	HG3_Ill_GATKHCSBGrefine_9286	TACCACCATTTATTTACTTACTATAGGAAACAGCCTTTAAAAGGATGCAATAATCCTTATTCCTGATATTCGTGCCCTTGCTTAATCTCCTGTCTCCTAAATGTAGGAAGGATGTATTGACTCATATCTAATAAATAGAATATGGTATAAGCAGTAGGATGCACCTTCTGATAGTAGGTTACAAAAATAACGGTGGTTTCCACCTCACAGGCCCTTGCTTTGGGTGAAGCAAGCTGCTATTTGGTGAGTAACTCCGTGGTCAGTCTCACATTGAAATAAATGATGTCTCCA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2828:HG3_Ill_Krunchall_18751:HG2_Ill_Krunchall_19113:HG2_PB_SVrefine2PB10Xhap12_10165:HG4_PB_assemblyticsfalcon_6835:HG2_PB_assemblyticsfalcon_6934:HG2_PB_PB10Xdip_8942:HG3_Ill_MetaSV_1376:HG2_Ill_tnscope_1549:HG4_PB_SVrefine2Falcon1Dovetail_8556:HG4_Ill_Cortex_922:HG3_PB_assemblyticsfalcon_6935:HG3_PB_SVrefine2PBcRDovetail_6635:HG3_PB_SVrefine2Falcon1Dovetail_8508:HG3_Ill_scalpel_13522:HG3_Ill_manta_3173:HG3_Ill_SVrefine2DISCOVARDovetail_10104:HG3_Ill_GATKHCSBGrefine_9286:HG3_Ill_Cortex_972:HG3_10X_allpass_2734:HG2_PB_pbsv_14080:HG2_PB_SVrefine2PB10Xhap12_10164:HG2_PB_SVrefine2Falcon1plusDovetail_2992:HG2_Ill_manta_3879:HG2_Ill_SpiralSDKrefine_4317:HG2_Ill_SVrefine2DISCOVARplusDovetail_3317:HG2_Ill_MetaSV_1248:HG2_Ill_GATKHCSBGrefine_9371:HG2_Ill_Cortex_2200:HG2_10X_SVrefine210Xhap12_9786:HG3_PB_pbsv_13767:HG2_PB_assemblyticsPBcR_6690;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9786:HG2_Ill_Cortex_2200:HG2_Ill_GATKHCSBGrefine_9371:HG2_Ill_MetaSV_1248:HG2_Ill_SVrefine2DISCOVARplusDovetail_3317:HG2_Ill_SpiralSDKrefine_4317:HG2_Ill_manta_3879:HG2_PB_SVrefine2Falcon1plusDovetail_2992:HG2_PB_SVrefine2PB10Xhap12_10164:HG2_PB_pbsv_14080:HG3_10X_allpass_2734:HG3_Ill_Cortex_972:HG3_Ill_GATKHCSBGrefine_9286:HG3_Ill_SVrefine2DISCOVARDovetail_10104:HG3_Ill_manta_3173:HG3_Ill_scalpel_13522:HG3_PB_SVrefine2Falcon1Dovetail_8508:HG3_PB_SVrefine2PBcRDovetail_6635:HG3_PB_assemblyticsfalcon_6935:HG4_Ill_Cortex_922:HG4_PB_SVrefine2Falcon1Dovetail_8556;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0721003;ClusterMaxSizeDiff=0.0721003;ClusterMaxEditDist=0.0974843;PBcalls=14;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-290;DistBack=37895;DistForward=-216;DistMin=-216;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=13:55941179-55941472;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=950.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:38:0|1:40:0:3:47:1|0:0:21:42:0:0/1:65:21:./.:.:.:.:.:.
chr13	55952595	HG3_Ill_GATKHC_22363	GTTATTTAAACTAGGACATTGTTCTACTCCTTAAATAAATATAGAAGTAATCGAGATGTTTATTTATTCTTGGAAAACTGGAATATAATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9787:HG2_PB_HySA_25660:HG2_Ill_Spiral_939:HG2_PB_pbsv_14081:HG3_PB_HySA_21215:HG3_Ill_svaba_17704:HG3_Ill_scalpel_13523:HG3_Ill_manta_3174:HG3_Ill_Krunchall_18752:HG3_Ill_GATKHC_22363:HG3_Ill_GATKHCSBGrefine_9287:HG3_Ill_250bpfermikitraw_18255:HG3_Ill_150bpfermikitraw_17753:HG2_Ill_svaba_17539:HG2_Ill_manta_3880:HG2_Ill_SpiralSDKrefine_4318:HG2_Ill_Krunchall_19114:HG2_Ill_GATKHC_22481:HG2_Ill_GATKHCSBGrefine_9372:HG2_Ill_250bpfermikitraw_18785:HG3_PB_pbsv_13768:HG3_PB_SVrefine2PBcRDovetail_6636:HG3_PB_SVrefine2Falcon1Dovetail_8509:HG3_Ill_SVrefine2DISCOVARDovetail_10105:HG2_PB_SVrefine2Falcon1plusDovetail_2993;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_250bpfermikitraw_18785:HG2_Ill_GATKHCSBGrefine_9372:HG2_Ill_GATKHC_22481:HG2_Ill_Krunchall_19114:HG2_Ill_SpiralSDKrefine_4318:HG2_Ill_manta_3880:HG2_Ill_svaba_17539:HG3_Ill_150bpfermikitraw_17753:HG3_Ill_250bpfermikitraw_18255:HG3_Ill_GATKHCSBGrefine_9287:HG3_Ill_GATKHC_22363:HG3_Ill_Krunchall_18752:HG3_Ill_manta_3174:HG3_Ill_scalpel_13523:HG3_Ill_svaba_17704;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0222222;ClusterMaxSizeDiff=0.0222222;ClusterMaxEditDist=0.0337079;PBcalls=7;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=13;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-89;DistBack=11308;DistForward=-67;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=63;REFWIDENED=13:55952567-55952718;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=951.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:36:0|1:31:4:1:46:1|0:0:10:19:0:0/1:28:12:./.:.:.:.:.:.
chr13	56151096	HG2_PB_pbsv_14082	TGTGCTCTAGCTTATGCACAGAGGTCAAGATCCCTTCCCCAACTCTCCACACTGCTGCAGCCACTGCTGCCTCTGAAAGCCAAAGCAAGCAAACCTTAAATCTGAGAGTCTGGGTATGTAAACA	T	20	PASS	ClusterIDs=HG2_CG_vcfBeta_7958:HG2_PB_HySA_25662:HG2_PB_assemblyticsPBcR_6691:HG3_Ill_Krunchall_18755:HG2_Ill_Krunchall_19116:HG3_PB_pbsv_13769:HG3_PB_SVrefine2PBcRDovetail_6637:HG3_PB_HySA_21218:HG3_Ill_svaba_17705:HG3_Ill_scalpel_13525:HG3_Ill_manta_3175:HG3_Ill_SVrefine2DISCOVARDovetail_10106:HG3_Ill_MetaSV_1377:HG3_Ill_GATKHC_22366:HG3_Ill_GATKHCSBGrefine_9288:HG3_Ill_Cortex_973:HG3_Ill_250bpfermikitraw_18258:HG3_CG_vcfBeta_7588:HG2_PB_pbsv_14082:HG2_PB_SVrefine2PBcRplusDovetail_2829:HG2_PB_SVrefine2PB10Xhap12_10166:HG2_PB_SVrefine2Falcon2Bionano_7005:HG2_Ill_svaba_17540:HG2_Ill_breakscan11_2003:HG2_Ill_MetaSV_1249:HG2_Ill_GATKHCSBGrefine_9373:HG2_Ill_Cortex_2202;NumClusterSVs=27;ExactMatchIDs=HG2_CG_vcfBeta_7958:HG3_PB_pbsv_13769:HG3_PB_SVrefine2PBcRDovetail_6637:HG3_PB_HySA_21218:HG3_Ill_svaba_17705:HG3_Ill_scalpel_13525:HG3_Ill_manta_3175:HG3_Ill_SVrefine2DISCOVARDovetail_10106:HG3_Ill_MetaSV_1377:HG3_Ill_GATKHC_22366:HG3_Ill_GATKHCSBGrefine_9288:HG3_Ill_Cortex_973:HG3_Ill_250bpfermikitraw_18258:HG3_CG_vcfBeta_7588:HG2_PB_pbsv_14082:HG2_PB_SVrefine2PBcRplusDovetail_2829:HG2_PB_SVrefine2PB10Xhap12_10166:HG2_PB_SVrefine2Falcon2Bionano_7005:HG2_Ill_svaba_17540:HG2_Ill_breakscan11_2003:HG2_Ill_MetaSV_1249:HG2_Ill_GATKHCSBGrefine_9373:HG2_Ill_Cortex_2202;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0163265;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.0326531;PBcalls=9;Illcalls=16;TenXcalls=0;CGcalls=2;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=2;HG2count=13;HG3count=14;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-123;DistBack=67832;DistForward=3617;DistMin=3617;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=13:56151097-56151221;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=952.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:24:0|1:13:1:1:28:1|0:0:23:37:1:0/1:34:14:./.:.:.:.:.:.
chr13	56851591	HG2_10X_SVrefine210Xhap12_9791	CAGCCTGGCCAACATGGTGAAACCATGTCTCTACTAAAAACAAAAATTAGCTGGGTGTGGTGGCGAGCACCTGTACCCCAACTACCCGGGAGGCTGAGGCACAACAATCACTTGAACCCAGGAAGCACAGGTTACTGTGAGACATGATTGTGCCCTGCACGCTGGCCTGGGTGACACAGGGAGACTCCGAGAAGAAAAAGAAAGAAAGAAGGAAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAATATGAATCTCAATAGGTGAAACTTATTTTAGTGAAGACAATGAAAGGAAAAAGCACGTTTCTTAAAATGTAGGCATGCAATGGATTGACATAAGGACTTGACAGTATGGAAAGACAATATATGGAGGGTAGGGCAGAAAAAGTACGAAGAGTTGAATTAGAAAAGATTTAATTTAGAAAAGATAAGGACTGTCACAAAGCAAAATGATGTTTGTTCCTTATTTTATACATTATAGTATAATTTAAAGCTTCGTTTAAGTCTGGATAAAAGATCAAGTTTTTAAGAAAATCCTTTACATGTGTTTTTATGAAGTATTATATACACTAATCTCAATAGATTAGTTATGAATAGAAACATTATGTCCTTTTTCTTGCTTACTTTTCTAGCCCAAGGACTCAGAATCACAATGACTCAAAGCTTTATTGTAAAAACCCCATCACCATTTTTTGATGCTTGAGATACCGCATCTTGTATAAAGATTCCATTTTAGGGGTCTGATTTGGAATTCAGATAAATGAGCACAGAGCATTACATCTGCAATTGG	C	20	PASS	ClusterIDs=HG4_Ill_Spiral_1099:HG2_10X_allpass_2242:HG4_PB_pbsv_14057:HG2_PB_HySA_25671:HG4_10X_allpass_2631:HG2_PB_assemblyticsPBcR_6700:HG2_Ill_Krunchall_19125:HG2_Ill_tnscope_1551:HG4_PB_SVrefine2PBcRDovetail_7025:HG4_Ill_manta_3301:HG4_Ill_MetaSV_1340:HG4_Ill_GATKHCSBGrefine_9684:HG2_PB_pbsv_14089:HG2_PB_SVrefine2PBcRplusDovetail_2831:HG2_PB_SVrefine2PB10Xhap12_10171:HG2_PB_SVrefine2Falcon2Bionano_7008:HG2_PB_SVrefine2Falcon1plusDovetail_2998:HG2_Ill_manta_3882:HG2_Ill_SpiralSDKrefine_4325:HG2_Ill_SVrefine2DISCOVARplusDovetail_3322:HG2_Ill_MetaSV_1252:HG2_Ill_GATKHCSBGrefine_9384:HG2_10X_SVrefine210Xhap12_9791;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9791:HG2_Ill_GATKHCSBGrefine_9384:HG2_Ill_MetaSV_1252:HG2_Ill_SVrefine2DISCOVARplusDovetail_3322:HG2_Ill_SpiralSDKrefine_4325:HG2_Ill_manta_3882:HG2_PB_SVrefine2Falcon1plusDovetail_2998:HG2_PB_SVrefine2Falcon2Bionano_7008:HG2_PB_SVrefine2PB10Xhap12_10171:HG2_PB_SVrefine2PBcRplusDovetail_2831:HG2_PB_pbsv_14089:HG4_Ill_GATKHCSBGrefine_9684:HG4_Ill_MetaSV_1340:HG4_Ill_manta_3301:HG4_PB_SVrefine2PBcRDovetail_7025;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0280317;ClusterMaxSizeDiff=0.0280317;ClusterMaxEditDist=0.0280317;PBcalls=9;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-830;DistBack=26421;DistForward=-829;DistMin=-829;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=13:56851592-56852423;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=953.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:38:./.:9:24:24:2:0|1:55:0:0:23:0/1:59:26:0/1:73:21:2185:.:.
chr13	57507922	HG4_Ill_150bpfermikitraw_17870	GTATAGTATAGTATATAGTATAGTATATACTATAGTATATACTATAGTATATAC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17728:HG4_PB_HySA_20511:HG2_PB_assemblyticsfalcon_6954:HG2_PB_assemblyticsPBcR_6702:HG4_PB_assemblyticsfalcon_6852:HG4_Ill_Krunchall_19455:HG4_Ill_GATKHC_22480:HG4_Ill_GATKHCSBGrefine_9688:HG4_Ill_250bpfermikitraw_18563:HG4_Ill_150bpfermikitraw_17870:HG3_Ill_GATKHC_22383:HG3_Ill_GATKHCSBGrefine_9294:HG3_Ill_250bpfermikitraw_18273:HG3_Ill_150bpfermikitraw_17769:HG2_Ill_SpiralSDKrefine_4328:HG2_Ill_Krunchall_19130:HG2_Ill_GATKHC_22498:HG2_Ill_GATKHCSBGrefine_9386:HG2_Ill_250bpfermikitraw_18798;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17728:HG4_PB_assemblyticsfalcon_6852:HG4_Ill_Krunchall_19455:HG4_Ill_GATKHC_22480:HG4_Ill_GATKHCSBGrefine_9688:HG4_Ill_250bpfermikitraw_18563:HG4_Ill_150bpfermikitraw_17870:HG3_Ill_GATKHC_22383:HG3_Ill_GATKHCSBGrefine_9294:HG3_Ill_250bpfermikitraw_18273:HG3_Ill_150bpfermikitraw_17769:HG2_Ill_SpiralSDKrefine_4328:HG2_Ill_Krunchall_19130:HG2_Ill_GATKHC_22498:HG2_Ill_GATKHCSBGrefine_9386:HG2_Ill_250bpfermikitraw_18798;NumExactMatchSVs=16;ClusterMaxShiftDist=0.115385;ClusterMaxSizeDiff=0.115385;ClusterMaxEditDist=0.115385;PBcalls=4;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-53;DistBack=63820;DistForward=40;DistMin=40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=126;REFWIDENED=13:57507898-57508076;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=954.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:39:0|1:29:4:3:37:0|1:23:0:1:21:0/1:23:17:./.:.:.:.:.:.
chr13	57975500	HG4_Ill_scalpel_12982	AGATATACTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9794:HG2_PB_HySA_25682:HG4_PB_assemblyticsfalcon_6862:HG2_PB_assemblyticsfalcon_6963:HG2_PB_assemblyticsPBcR_6711:HG4_Ill_Krunchall_19466:HG3_Ill_Krunchall_18776:HG2_Ill_Krunchall_19138:HG4_PB_pbsv_14062:HG3_PB_pbsv_13777:HG2_PB_pbsv_14093:HG2_PB_HySA_25681:HG4_PB_HySA_20520:HG4_Ill_MetaSV_1342:HG2_Ill_tnscope_1552:HG2_Ill_MetaSV_1254:HG4_PB_SVrefine2PBcRDovetail_7031:HG4_PB_SVrefine2Falcon1Dovetail_8563:HG4_Ill_scalpel_12982:HG4_Ill_manta_3303:HG4_Ill_SVrefine2DISCOVARDovetail_9978:HG4_Ill_GATKHCSBGrefine_9690:HG4_10X_allpass_2632:HG3_PB_assemblyticsfalcon_6956:HG3_PB_SVrefine2Falcon1Dovetail_8514:HG3_Ill_scalpel_13537:HG3_Ill_manta_3177:HG3_Ill_SVrefine2DISCOVARDovetail_10113:HG3_Ill_MetaSV_1380:HG3_Ill_GATKHCSBGrefine_9296:HG3_10X_allpass_2736:HG2_PB_SVrefine2PBcRplusDovetail_2835:HG2_PB_SVrefine2PB10Xhap12_10176:HG2_PB_SVrefine2Falcon2Bionano_7010:HG2_PB_SVrefine2Falcon1plusDovetail_3001:HG2_Ill_scalpel_13274:HG2_Ill_manta_3883:HG2_Ill_breakscan11_2004:HG2_Ill_SVrefine2DISCOVARplusDovetail_3327:HG2_Ill_GATKHCSBGrefine_9388:HG2_10X_allpass_2244;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9794:HG4_PB_SVrefine2PBcRDovetail_7031:HG4_PB_SVrefine2Falcon1Dovetail_8563:HG4_Ill_scalpel_12982:HG4_Ill_manta_3303:HG4_Ill_SVrefine2DISCOVARDovetail_9978:HG4_Ill_GATKHCSBGrefine_9690:HG4_10X_allpass_2632:HG3_PB_assemblyticsfalcon_6956:HG3_PB_SVrefine2Falcon1Dovetail_8514:HG3_Ill_scalpel_13537:HG3_Ill_manta_3177:HG3_Ill_SVrefine2DISCOVARDovetail_10113:HG3_Ill_MetaSV_1380:HG3_Ill_GATKHCSBGrefine_9296:HG3_10X_allpass_2736:HG2_PB_SVrefine2PBcRplusDovetail_2835:HG2_PB_SVrefine2PB10Xhap12_10176:HG2_PB_SVrefine2Falcon2Bionano_7010:HG2_PB_SVrefine2Falcon1plusDovetail_3001:HG2_Ill_scalpel_13274:HG2_Ill_manta_3883:HG2_Ill_breakscan11_2004:HG2_Ill_SVrefine2DISCOVARplusDovetail_3327:HG2_Ill_GATKHCSBGrefine_9388:HG2_10X_allpass_2244;NumExactMatchSVs=26;ClusterMaxShiftDist=0.104046;ClusterMaxSizeDiff=0.104046;ClusterMaxEditDist=0.104046;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-348;DistBack=6208;DistForward=-337;DistMin=-337;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=13:57975501-57975863;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=955.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:1:17:0:13:1/1:0:18:0:17:1/1:0:55:0/1:5:14:.:.:.
chr13	58528926	HG3_PB_SVrefine2Falcon1Dovetail_8516	TAGTTCTAGATCCTTGAGGAATCGCCACATTGTCTTCCACAATGGTTGAACTAGTTTAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9800:HG3_PB_HySA_21242:HG2_PB_HySA_25688:HG4_PB_pbsv_14064:HG2_PB_pbsv_14095:HG3_PB_pbsv_13779:HG4_PB_SVrefine2PBcRDovetail_7033:HG4_PB_SVrefine2Falcon1Dovetail_8565:HG4_Ill_svaba_17609:HG4_Ill_scalpel_12987:HG4_Ill_SVrefine2DISCOVARDovetail_9982:HG4_Ill_Krunchall_19472:HG4_Ill_GATKHCSBGrefine_9692:HG4_Ill_250bpfermikitraw_18578:HG3_PB_SVrefine2PBcRDovetail_6644:HG3_PB_SVrefine2Falcon1Dovetail_8516:HG3_Ill_svaba_17734:HG3_Ill_scalpel_13546:HG3_Ill_manta_3178:HG3_Ill_SVrefine2DISCOVARDovetail_10117:HG3_Ill_Krunchall_18783:HG3_Ill_GATKHCSBGrefine_9298:HG3_Ill_250bpfermikitraw_18289:HG3_Ill_150bpfermikitraw_17784:HG2_PB_SVrefine2PBcRplusDovetail_2837:HG2_PB_SVrefine2PB10Xhap12_10178:HG2_PB_SVrefine2Falcon1plusDovetail_3003:HG2_Ill_svaba_17568:HG2_Ill_scalpel_13282:HG2_Ill_manta_3885:HG2_Ill_SVrefine2DISCOVARplusDovetail_3333:HG2_Ill_GATKHCSBGrefine_9390:HG2_Ill_250bpfermikitraw_18812:HG2_Ill_150bpfermikitraw_17742;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9800:HG4_PB_SVrefine2PBcRDovetail_7033:HG4_PB_SVrefine2Falcon1Dovetail_8565:HG4_Ill_svaba_17609:HG4_Ill_scalpel_12987:HG4_Ill_SVrefine2DISCOVARDovetail_9982:HG4_Ill_Krunchall_19472:HG4_Ill_GATKHCSBGrefine_9692:HG4_Ill_250bpfermikitraw_18578:HG3_PB_SVrefine2PBcRDovetail_6644:HG3_PB_SVrefine2Falcon1Dovetail_8516:HG3_Ill_svaba_17734:HG3_Ill_scalpel_13546:HG3_Ill_manta_3178:HG3_Ill_SVrefine2DISCOVARDovetail_10117:HG3_Ill_Krunchall_18783:HG3_Ill_GATKHCSBGrefine_9298:HG3_Ill_250bpfermikitraw_18289:HG3_Ill_150bpfermikitraw_17784:HG2_PB_SVrefine2PBcRplusDovetail_2837:HG2_PB_SVrefine2PB10Xhap12_10178:HG2_PB_SVrefine2Falcon1plusDovetail_3003:HG2_Ill_svaba_17568:HG2_Ill_scalpel_13282:HG2_Ill_manta_3885:HG2_Ill_SVrefine2DISCOVARplusDovetail_3333:HG2_Ill_GATKHCSBGrefine_9390:HG2_Ill_250bpfermikitraw_18812:HG2_Ill_150bpfermikitraw_17742;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.0521739;PBcalls=12;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-58;DistBack=0;DistForward=28245;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=61;REFWIDENED=13:58528927-58529045;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=956.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:48:1/1:1:17:1:19:1/1:0:6:0:11:1/1:0:35:./.:.:.:.:.:.
chr13	59044763	HG3_10X_allpass_2737	TAAAAAAAAGATGCGGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGTCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Krunchall_18788:HG3_PB_SVrefine2PBcRDovetail_6646:HG3_PB_pbsv_13781:HG3_PB_assemblyticsfalcon_6968:HG3_Ill_Spiral_14654:HG2_Ill_tnscope_1553:HG2_Ill_Spiral_940:HG2_Ill_MetaSV_1256:HG4_PB_SVrefine2Falcon1Dovetail_8568:HG3_PB_SVrefine2Falcon1Dovetail_8519:HG3_Ill_manta_3179:HG3_Ill_MetaSV_1382:HG3_Ill_GATKHCSBGrefine_9300:HG3_10X_allpass_2737:HG2_PB_pbsv_14098:HG2_Ill_manta_3887:HG2_Ill_breakscan11_2005:HG2_Ill_SVrefine2DISCOVARplusDovetail_3335:HG2_Ill_GATKHCSBGrefine_9392:HG2_10X_allpass_2245:HG2_10X_SVrefine210Xhap12_9803;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9803:HG2_10X_allpass_2245:HG2_Ill_GATKHCSBGrefine_9392:HG2_Ill_SVrefine2DISCOVARplusDovetail_3335:HG2_Ill_breakscan11_2005:HG2_Ill_manta_3887:HG2_PB_pbsv_14098:HG3_10X_allpass_2737:HG3_Ill_GATKHCSBGrefine_9300:HG3_Ill_MetaSV_1382:HG3_Ill_manta_3179:HG3_PB_SVrefine2Falcon1Dovetail_8519:HG4_PB_SVrefine2Falcon1Dovetail_8568;NumExactMatchSVs=13;ClusterMaxShiftDist=0.102013;ClusterMaxSizeDiff=0.102013;ClusterMaxEditDist=0.177181;PBcalls=6;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=25488;DistForward=41383;DistMin=25488;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=13:59044764-59045091;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=957.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:18:0|1:49:0:1:23:1|0:0:18:53:0:0/1:28:19:0/1:22:3:.:.:.
chr13	60172490	HG4_Ill_GATKHCSBGrefine_9698	TAAGATCATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAATAAAAAATAAAAAAAACAAAACAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_1100:HG4_Ill_Krunchall_19477:HG3_Ill_Krunchall_18796:HG2_PB_pbsv_14105:HG2_Ill_Krunchall_19156:HG4_PB_assemblyticsfalcon_6882:HG3_PB_assemblyticsfalcon_6979:HG2_PB_assemblyticsfalcon_6984:HG2_PB_assemblyticsPBcR_6736:HG2_PB_HySA_25704:HG4_PB_pbsv_14073:HG4_Ill_MetaSV_1348:HG3_Ill_MetaSV_1385:HG2_Ill_tnscope_1554:HG2_Ill_MetaSV_1259:HG4_PB_SVrefine2PBcRDovetail_7040:HG4_PB_SVrefine2Falcon1Dovetail_8572:HG4_Ill_svaba_17616:HG4_Ill_scalpel_12994:HG4_Ill_manta_3306:HG4_Ill_SVrefine2DISCOVARDovetail_9990:HG4_Ill_Krunchall_19476:HG4_Ill_GATKHCSBGrefine_9698:HG4_10X_allpass_2633:HG3_PB_pbsv_13786:HG3_PB_SVrefine2PBcRDovetail_6648:HG3_PB_SVrefine2Falcon1Dovetail_8523:HG3_Ill_svaba_17747:HG3_Ill_manta_3180:HG3_Ill_SVrefine2DISCOVARDovetail_10123:HG3_Ill_Krunchall_18795:HG3_Ill_GATKHCSBGrefine_9306:HG3_10X_allpass_2738:HG2_PB_SVrefine2PBcRplusDovetail_2842:HG2_PB_SVrefine2PB10Xhap12_10182:HG2_PB_SVrefine2Falcon2Bionano_7017:HG2_PB_SVrefine2Falcon1plusDovetail_3009:HG2_Ill_svaba_17580:HG2_Ill_manta_3888:HG2_Ill_SVrefine2DISCOVARplusDovetail_3339:HG2_Ill_GATKHCSBGrefine_9396:HG2_10X_allpass_2246:HG2_10X_SVrefine210Xhap12_9809:HG2_Ill_breakscan11_2007;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9809:HG2_10X_allpass_2246:HG2_Ill_GATKHCSBGrefine_9396:HG2_Ill_SVrefine2DISCOVARplusDovetail_3339:HG2_Ill_manta_3888:HG2_Ill_svaba_17580:HG2_PB_SVrefine2Falcon1plusDovetail_3009:HG2_PB_SVrefine2Falcon2Bionano_7017:HG2_PB_SVrefine2PB10Xhap12_10182:HG2_PB_SVrefine2PBcRplusDovetail_2842:HG3_10X_allpass_2738:HG3_Ill_GATKHCSBGrefine_9306:HG3_Ill_Krunchall_18795:HG3_Ill_SVrefine2DISCOVARDovetail_10123:HG3_Ill_manta_3180:HG3_Ill_svaba_17747:HG3_PB_SVrefine2Falcon1Dovetail_8523:HG3_PB_SVrefine2PBcRDovetail_6648:HG3_PB_pbsv_13786:HG4_10X_allpass_2633:HG4_Ill_GATKHCSBGrefine_9698:HG4_Ill_Krunchall_19476:HG4_Ill_SVrefine2DISCOVARDovetail_9990:HG4_Ill_manta_3306:HG4_Ill_scalpel_12994:HG4_Ill_svaba_17616:HG4_PB_SVrefine2Falcon1Dovetail_8572:HG4_PB_SVrefine2PBcRDovetail_7040;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0515152;ClusterMaxSizeDiff=0.0515152;ClusterMaxEditDist=0.0515152;PBcalls=16;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=24370;DistForward=6437;DistMin=6437;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=13:60172491-60172832;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=958.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:58:1/1:1:31:0:24:1/1:0:12:0:26:1/1:0:45:0/1:2:9:.:.:.
chr13	60786161	HG2_Ill_manta_3890	GGGAAGCCGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGGCTGGCCAACACGGCGAAACGCCGTCTCTACTAAAAAACACAAAAATTACCTGGATGTAGTGGTGGACGCTTGTAGTCCAGCTACTCGGGAGGCTGAGGCAAGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCCCAAAAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAAGCATGACTATATATACATTTATATATGGTAAAGTACAAAAATCTA	G	20	PASS	ClusterIDs=HG4_Ill_Krunchall_19479:HG2_10X_allpass_2247:HG2_Ill_tnscope_1555:HG4_PB_assemblyticsfalcon_6886:HG4_PB_SVrefine2PBcRDovetail_7043:HG4_PB_SVrefine2Falcon1Dovetail_8574:HG4_Ill_manta_3308:HG4_Ill_SVrefine2DISCOVARDovetail_9995:HG4_Ill_MetaSV_1350:HG4_Ill_GATKHCSBGrefine_9700:HG3_PB_assemblyticsfalcon_6984:HG3_PB_SVrefine2Falcon1Dovetail_8525:HG2_PB_assemblyticsPBcR_6740:HG2_PB_SVrefine2PBcRplusDovetail_2845:HG2_PB_SVrefine2PB10Xhap12_10185:HG2_Ill_manta_3890:HG2_Ill_breakscan11_2008:HG2_Ill_SpiralSDKrefine_4349:HG2_Ill_SVrefine2DISCOVARplusDovetail_3344:HG2_Ill_MetaSV_1261:HG2_Ill_GATKHCSBGrefine_9398:HG2_10X_SVrefine210Xhap12_9812:HG2_PB_assemblyticsfalcon_6988:HG2_PB_SVrefine2Falcon1plusDovetail_3011:HG4_PB_HySA_20542:HG4_PB_pbsv_14076:HG2_PB_pbsv_14108:HG4_10X_allpass_2634:HG2_Ill_Krunchall_19160;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9812:HG2_Ill_GATKHCSBGrefine_9398:HG2_Ill_MetaSV_1261:HG2_Ill_SVrefine2DISCOVARplusDovetail_3344:HG2_Ill_SpiralSDKrefine_4349:HG2_Ill_breakscan11_2008:HG2_Ill_manta_3890:HG2_PB_SVrefine2PB10Xhap12_10185:HG2_PB_SVrefine2PBcRplusDovetail_2845:HG2_PB_assemblyticsPBcR_6740:HG3_PB_SVrefine2Falcon1Dovetail_8525:HG3_PB_assemblyticsfalcon_6984:HG4_Ill_GATKHCSBGrefine_9700:HG4_Ill_MetaSV_1350:HG4_Ill_SVrefine2DISCOVARDovetail_9995:HG4_Ill_manta_3308:HG4_PB_SVrefine2Falcon1Dovetail_8574:HG4_PB_SVrefine2PBcRDovetail_7043:HG4_PB_assemblyticsfalcon_6886;NumExactMatchSVs=19;ClusterMaxShiftDist=0.161054;ClusterMaxSizeDiff=0.161054;ClusterMaxEditDist=0.199377;PBcalls=13;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=55085;DistForward=6712;DistMin=6712;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=13:60786162-60786488;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=959.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:33:1|0:5:25:23:0:./.:45:0:1:17:0/1:50:18:0/1:43:9:.:.:.
chr13	60881444	HG3_Ill_SVrefine2DISCOVARDovetail_10127	ACATTTTCCTGTCTTCTTCTGAGCCCTCCAAACTATCCCAACCTCTGCCTGTTACCCAGTTCCAAAGTTGCTTCCACATTTTCGGGTATCTTTATAGCAGGGCCTCACTCTCTGTGGTACCAATTTACTGTATTAGCCCTGTCACATGCTACTAATAAAGACATAACCAAGACTGGGTAATTTATAAGGAAAAGAGGTTTAATTGACTCACAGTTCCACAGAGTTGGGGAGGCCTCAGAAAACTTATAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9813:HG2_PB_HySA_25711:HG3_Ill_Krunchall_18804:HG2_Ill_Krunchall_19164:HG4_PB_assemblyticsfalcon_6889:HG4_PB_SVrefine2Falcon1Dovetail_8575:HG3_PB_pbsv_13789:HG3_PB_assemblyticsfalcon_6986:HG3_PB_SVrefine2PBcRDovetail_6650:HG3_PB_SVrefine2Falcon1Dovetail_8526:HG3_Ill_scalpel_13567:HG3_Ill_manta_3182:HG3_Ill_SVrefine2DISCOVARDovetail_10127:HG3_Ill_MetaSV_1387:HG3_Ill_GATKHCSBGrefine_9308:HG3_10X_allpass_2740:HG2_PB_pbsv_14110:HG2_Ill_scalpel_13302:HG2_Ill_manta_3891:HG2_Ill_breakscan11_2009:HG2_Ill_SpiralSDKrefine_4353:HG2_Ill_MetaSV_1262:HG2_Ill_GATKHCSBGrefine_9399:HG2_10X_allpass_2248;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9813:HG4_PB_assemblyticsfalcon_6889:HG4_PB_SVrefine2Falcon1Dovetail_8575:HG3_PB_pbsv_13789:HG3_PB_assemblyticsfalcon_6986:HG3_PB_SVrefine2PBcRDovetail_6650:HG3_PB_SVrefine2Falcon1Dovetail_8526:HG3_Ill_scalpel_13567:HG3_Ill_manta_3182:HG3_Ill_SVrefine2DISCOVARDovetail_10127:HG3_Ill_MetaSV_1387:HG3_Ill_GATKHCSBGrefine_9308:HG3_10X_allpass_2740:HG2_PB_pbsv_14110:HG2_Ill_scalpel_13302:HG2_Ill_manta_3891:HG2_Ill_breakscan11_2009:HG2_Ill_SpiralSDKrefine_4353:HG2_Ill_MetaSV_1262:HG2_Ill_GATKHCSBGrefine_9399:HG2_10X_allpass_2248;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0506823;ClusterMaxSizeDiff=0.0506823;ClusterMaxEditDist=0.0506823;PBcalls=8;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-249;DistBack=24225;DistForward=-231;DistMin=-231;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=13:60881445-60881696;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=960.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:13:./.:9:6:10:5:1|0:0:16:84:0:0/1:35:16:./.:.:.:.:.:.
chr13	61286423	HG2_10X_allpass_2249	CCAAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATACTTGGAAGTAAGGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTGGAACTCAGGATTAAGAATCTCACTCAAAACTGCTCAACTCCATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGTTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGTCGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGTCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAACAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCACTAGCAAGACTAATAAAGAAAAAGAGAGAGAAGAATCAAATAGATGCAATAAAAAATGATAAAGGGGATATCACCACTGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAACTCCTCGACACATACACCCTCCCAGGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGGACCACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAGCTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAATTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCTGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_14079:HG2_PB_pbsv_14112:HG4_PB_assemblyticsfalcon_6894:HG3_PB_assemblyticsfalcon_6992:HG2_PB_assemblyticsfalcon_6996:HG2_PB_assemblyticsPBcR_6747:HG4_PB_SVrefine2Falcon1Dovetail_8577:HG3_PB_SVrefine2Falcon1Dovetail_8528:HG2_PB_SVrefine2Falcon1plusDovetail_3013:HG4_PB_SVrefine2PBcRDovetail_7044:HG4_Ill_MetaSV_1352:HG4_Ill_GATKHCSBGrefine_9702:HG4_10X_allpass_2635:HG3_Ill_Krunchall_18811:HG3_Ill_GATKHCSBGrefine_9311:HG3_10X_allpass_2741:HG2_PB_SVrefine2PBcRplusDovetail_2846:HG2_PB_SVrefine2PB10Xhap12_10186:HG2_PB_SVrefine2Falcon2Bionano_7020:HG2_Ill_MetaSV_1265:HG2_Ill_GATKHCSBGrefine_9402:HG2_10X_allpass_2249:HG2_10X_SVrefine210Xhap12_9816:HG2_Ill_tnscope_1556;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9816:HG2_10X_allpass_2249:HG2_Ill_GATKHCSBGrefine_9402:HG2_Ill_MetaSV_1265:HG2_PB_SVrefine2Falcon2Bionano_7020:HG2_PB_SVrefine2PB10Xhap12_10186:HG2_PB_SVrefine2PBcRplusDovetail_2846:HG3_10X_allpass_2741:HG3_Ill_GATKHCSBGrefine_9311:HG3_Ill_Krunchall_18811:HG4_10X_allpass_2635:HG4_Ill_GATKHCSBGrefine_9702:HG4_Ill_MetaSV_1352:HG4_PB_SVrefine2PBcRDovetail_7044;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00939408;ClusterMaxSizeDiff=0.00939408;ClusterMaxEditDist=0.0103335;PBcalls=13;Illcalls=7;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1065;DistBack=30707;DistForward=2048;DistMin=2048;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=13:61286424-61287493;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=961.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:36:1/1:1:6:0:11:1/1:0:13:0:20:1/1:0:34:1/1:2:62:2223:.:.
chr13	61314877	HG4_Ill_SVrefine2DISCOVARDovetail_9998	CTTTTTTTTTTTTCTTTTTTTAATTTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACAATGTGTAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTCCCAGTGCTATCCCTCCCCCCTCCCCCAACCCCACAACAGTCCCCAGAGTGTGATGTGCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGTGATGTTTGGTTTTTAGTCCTTGCGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCATGTCCCTACAAAGTACATGAACTCATCATTTTTTATGGCTACATAGTATTCCACGGTGAATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCACAATAGCATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATAGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATTGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCATGACTTTTTAATGATTGCCATTCTAACTAGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGTGAGCATTTTTTCATGTGTTTTTTGGCTGCATTAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTATTTGATGGGGTTGTTTGTTTTTTTCTCATAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGTGAAAATTTTCTCCCATTTTGTAGGTTGCTTGTTCACTCTGATGGTAG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7021:HG3_PB_pbsv_13792:HG2_PB_pbsv_14113:HG4_PB_pbsv_14080:HG3_PB_HySA_21270:HG2_PB_SVrefine2PB10Xhap12_10187:HG2_PB_SVrefine2Falcon1plusDovetail_3014:HG4_PB_SVrefine2PBcRDovetail_7045:HG4_PB_SVrefine2Falcon1Dovetail_8578:HG4_Ill_SVrefine2DISCOVARDovetail_9998:HG3_PB_SVrefine2PBcRDovetail_6651:HG3_PB_SVrefine2Falcon1Dovetail_8529:HG2_PB_SVrefine2PBcRplusDovetail_2848;NumClusterSVs=13;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_6651:HG4_Ill_SVrefine2DISCOVARDovetail_9998:HG4_PB_SVrefine2Falcon1Dovetail_8578:HG4_PB_SVrefine2PBcRDovetail_7045;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0070529;ClusterMaxSizeDiff=0.0070529;ClusterMaxEditDist=0.0312185;PBcalls=12;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-991;DistBack=-992;DistForward=-627;DistMin=-992;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=998;REFWIDENED=13:61314878-61316866;PctSeqSimilarity=0.9606;PctSizeSimilarity=0.998;PctRecOverlap=0.6421;SizeDiff=2;StartDistance=-355;EndDistance=-353;GTMatch=0;TruScore=86;MatchId=962.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:18:./.:36:6:6:15:./.:41:0:9:1:0/0:77:0:0/1:101:32:2223:.:.
chr13	61553033	HG2_Ill_MetaSV_1266	TTTATGCATTTAAGTCACAATTTATGTATACAAGCGTTAATGGATTCAAAGTTATCAAAGGCAAGAATAGGACTTTATGATGTTACAAATAGTATAACTACATTGATTTAAATTATAAAATAGGCTATTTCTTTAAAACGTGGATTGCATATATATAAGTTTTCTACTGGCTGTTGACCACTCAGGCCATAAAATGAATGTCATTAAACTTAAAAAGATTGAAATAATACAAAATTTGTCCTCTAACTACATTGGAATAAAATAAAAAGTCAATAGCAGAAGCAAATTTGGCAAATTCAGAAATATATGGAAATTAAGCAACATATTCTTACATAACAATTTCTTGTTCAAAGAAGAAATCACCAGGGAAATTAAAAAGCACCTTGAGATAAAAGAAACAAACAAACACAATACACAAAAACTCATGGGATGCACAAAAGCAGTAATCAGAGGGAAATTTATTGCTGTAAACATCTATGTTAAAAAAAAGAATTTCAAATCAATAACCTAACGTTCCACATTAAAAAACAAACAGGAAAGACCAAGCCTAACACAGAAAAATGGAAGGAAAAAATAATAAATATTAGAGGAAAAATAAATCAATAGTGAATAGAAAAATAACAGAGAAAATCAACAAAATCAAAGTTGATTACCTGAAAAGACCAACAGTATTGAAAACTATTATCATTGGTCAATTTAGAGCCACAAAATAAGAGATTCAAATAACTAAAATCAGGAATAAAAGATGATATATCTACTGGCCCATCAAAAAACAAAATGTATTCTAAGGGAAAGTGATGAATAAAAAATTAAAACCCCAGTGAAATACCACC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1557:HG2_PB_assemblyticsfalcon_7000:HG2_10X_allpass_2250:HG4_Ill_Krunchall_19488:HG3_Ill_Krunchall_18814:HG2_Ill_Krunchall_19174:HG4_PB_pbsv_14082:HG4_PB_SVrefine2PBcRDovetail_7046:HG4_Ill_manta_3311:HG4_Ill_MetaSV_1353:HG4_Ill_GATKHCSBGrefine_9707:HG3_PB_pbsv_13796:HG3_PB_SVrefine2Falcon1Dovetail_8530:HG3_Ill_manta_3187:HG3_Ill_MetaSV_1390:HG3_Ill_GATKHCSBGrefine_9314:HG3_10X_allpass_2742:HG2_PB_pbsv_14114:HG2_PB_SVrefine2PB10Xhap12_10189:HG2_PB_SVrefine2Falcon2Bionano_7022:HG2_PB_SVrefine2Falcon1plusDovetail_3015:HG2_Ill_manta_3894:HG2_Ill_breakscan11_2011:HG2_Ill_SpiralSDKrefine_4360:HG2_Ill_MetaSV_1266:HG2_Ill_GATKHCSBGrefine_9407:HG2_PB_HySA_25720;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9407:HG2_Ill_MetaSV_1266:HG2_Ill_SpiralSDKrefine_4360:HG2_Ill_breakscan11_2011:HG2_Ill_manta_3894:HG2_PB_SVrefine2Falcon1plusDovetail_3015:HG2_PB_SVrefine2Falcon2Bionano_7022:HG2_PB_SVrefine2PB10Xhap12_10189:HG2_PB_pbsv_14114:HG3_10X_allpass_2742:HG3_Ill_GATKHCSBGrefine_9314:HG3_Ill_MetaSV_1390:HG3_Ill_manta_3187:HG3_PB_SVrefine2Falcon1Dovetail_8530:HG3_PB_pbsv_13796:HG4_Ill_GATKHCSBGrefine_9707:HG4_Ill_MetaSV_1353:HG4_Ill_manta_3311:HG4_PB_SVrefine2PBcRDovetail_7046:HG4_PB_pbsv_14082;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00963855;ClusterMaxSizeDiff=0.00963855;ClusterMaxEditDist=0.00963855;PBcalls=10;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-832;DistBack=-833;DistForward=-636;DistMin=-833;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=13:61553034-61553868;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=963.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:33:0|1:32:0:2:32:1|0:0:33:75:0:0/1:61:18:0/1:37:14:.:.:.
chr13	61958362	HG4_Ill_SVrefine2DISCOVARDovetail_10004	GGAAACATTGGTAAATGTTAGTTAATAAAGAGTGATCAAGGAGTTAGTAGGAAATCTGAAAATGTGGTGTGATAGAAATCAGGAGTAGAGTTTTTCAAAAAAAAAAGGACATATTTTAAAAGAGTGATGCTAAAATATCAAGTCAGATAAAAAATTAAAAGTGTCCCCTGGAAAATGTTAAGTGAAGAACTGACTTTATTTTATTGGGGCTTTTATTTTTGAAAAAAAAAATTTAGAAAAATGGTTATATGTTGGGTGGGAAGCAGTAGTACTCTGGCCAATTTATTTGATACTGGAAGTGCAGTCATCATTTGGCATAGAGAAATAGCATAGA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3353:HG4_Ill_GATKHCSBGrefine_9708:HG2_Ill_GATKHCSBGrefine_9409:HG4_Ill_manta_3312:HG2_PB_PB10Xdip_8977:HG4_Ill_MetaSV_1355:HG2_Ill_MetaSV_1268:HG4_PB_pbsv_14086:HG4_PB_HySA_20551:HG2_PB_pbsv_14118:HG4_PB_SVrefine2PBcRDovetail_7047:HG4_PB_SVrefine2Falcon1Dovetail_8581:HG4_Ill_SVrefine2DISCOVARDovetail_10004:HG3_PB_SVrefine2Falcon1Dovetail_8534:HG2_PB_SVrefine2PB10Xhap12_10193:HG2_PB_SVrefine2Falcon2Bionano_7026:HG2_PB_SVrefine2Falcon1plusDovetail_3018;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3353:HG4_PB_SVrefine2PBcRDovetail_7047:HG4_PB_SVrefine2Falcon1Dovetail_8581:HG4_Ill_SVrefine2DISCOVARDovetail_10004:HG3_PB_SVrefine2Falcon1Dovetail_8534:HG2_PB_SVrefine2PB10Xhap12_10193:HG2_PB_SVrefine2Falcon2Bionano_7026:HG2_PB_SVrefine2Falcon1plusDovetail_3018;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0522273;ClusterMaxSizeDiff=0.0522273;ClusterMaxEditDist=0.0522273;PBcalls=10;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-333;DistBack=11874;DistForward=-332;DistMin=-332;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=325;REFWIDENED=13:61958363-61959020;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.988;PctRecOverlap=0.018;SizeDiff=4;StartDistance=-328;EndDistance=-324;GTMatch=0;TruScore=66;MatchId=964.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:26:0|1:59:1:3:21:./.:30:0:0:1:0/1:17:5:0/1:8:2:.:.:.
chr13	62015482	HG4_Ill_GATKHCSBGrefine_9709	TCATGTCCTTTGCAGGGACAGAAATGAAGTTGGGAACCATTATCCTCAGCAAACTAGCACAGGAACAGAAAAATATACACTGCATATTCTCAATCATTAGTGAGAGTTGAACAAAGAGAACACATGGACACAGGGAGGGGAACAACACAAATGAGAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9822:HG4_PB_HySA_20552:HG2_PB_HySA_25727:HG3_PB_pbsv_13800:HG4_PB_pbsv_14087:HG2_PB_pbsv_14119:HG3_PB_HySA_21280:HG4_Ill_svaba_17631:HG4_Ill_manta_3313:HG4_Ill_MetaSV_1356:HG4_Ill_GATKHC_22520:HG4_Ill_GATKHCSBGrefine_9709:HG4_10X_allpass_2636:HG3_Ill_svaba_17765:HG3_Ill_manta_3188:HG3_Ill_MetaSV_1392:HG3_Ill_GATKHC_22440:HG3_Ill_GATKHCSBGrefine_9317:HG3_10X_allpass_2743:HG2_Ill_svaba_17601:HG2_Ill_manta_3895:HG2_Ill_MetaSV_1269:HG2_Ill_GATKHCSBGrefine_9410:HG2_10X_allpass_2251:HG3_PB_SVrefine2PBcRDovetail_6653:HG3_PB_SVrefine2Falcon1Dovetail_8535:HG2_PB_SVrefine2Falcon2Bionano_7027;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_2251:HG2_Ill_GATKHCSBGrefine_9410:HG2_Ill_MetaSV_1269:HG2_Ill_manta_3895:HG2_Ill_svaba_17601:HG3_10X_allpass_2743:HG3_Ill_GATKHCSBGrefine_9317:HG3_Ill_GATKHC_22440:HG3_Ill_MetaSV_1392:HG3_Ill_manta_3188:HG3_Ill_svaba_17765:HG4_10X_allpass_2636:HG4_Ill_GATKHCSBGrefine_9709:HG4_Ill_GATKHC_22520:HG4_Ill_MetaSV_1356:HG4_Ill_manta_3313:HG4_Ill_svaba_17631;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0127389;ClusterMaxSizeDiff=0.0127389;ClusterMaxEditDist=0.0128205;PBcalls=9;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=9;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-156;DistBack=56461;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=156;REFWIDENED=13:62015475-62015786;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=965.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:25:0|1:48:4:1:29:0|1:42:1:0:22:0/1:42:26:./.:.:.:.:.:.
chr13	62635443	HG2_PB_assemblyticsPBcR_6760	TTATATATTTATATGATATATAATATATTATATATTTATATGATATATAATATATTA	T	20	PASS	ClusterIDs=HG2_PB_HySA_25738:HG4_PB_pbsv_14089:HG2_PB_pbsv_14124:HG2_PB_HySA_25739:HG4_Ill_svaba_17633:HG4_Ill_scalpel_13006:HG4_Ill_manta_3315:HG4_Ill_GATKHCSBGrefine_9710:HG3_Ill_svaba_17770:HG3_Ill_scalpel_13577:HG3_Ill_manta_3190:HG3_Ill_GATKHCSBGrefine_9322:HG2_PB_assemblyticsfalcon_7007:HG2_PB_assemblyticsPBcR_6760:HG2_Ill_svaba_17606:HG2_Ill_scalpel_13313:HG2_Ill_manta_3897:HG2_Ill_GATKHC_22565:HG2_Ill_GATKHCSBGrefine_9413:HG2_Ill_250bpfermikitraw_18844:HG2_Ill_150bpfermikitraw_17777:HG2_Ill_SpiralSDKrefine_4368;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17777:HG2_Ill_250bpfermikitraw_18844:HG2_Ill_GATKHCSBGrefine_9413:HG2_Ill_GATKHC_22565:HG2_Ill_manta_3897:HG2_Ill_scalpel_13313:HG2_Ill_svaba_17606:HG2_PB_assemblyticsPBcR_6760:HG2_PB_assemblyticsfalcon_7007:HG3_Ill_GATKHCSBGrefine_9322:HG3_Ill_manta_3190:HG3_Ill_scalpel_13577:HG3_Ill_svaba_17770:HG4_Ill_GATKHCSBGrefine_9710:HG4_Ill_manta_3315:HG4_Ill_scalpel_13006:HG4_Ill_svaba_17633;NumExactMatchSVs=17;ClusterMaxShiftDist=0.208;ClusterMaxSizeDiff=0.208;ClusterMaxEditDist=0.224;PBcalls=6;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=41640;DistForward=-23;DistMin=-23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=13:62635442-62635505;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=966.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:68:./.:0:1:0:0:./.:0:3:0:1:1/1:0:11:./.:.:.:.:.:.
chr13	63566298	HG2_Ill_150bpfermikitraw_17781	AAGGGGGAATGCATTCAACTTTTCCTCGTTCAGTATAATGTTGGTTGTGGGTTTGTCATACATAGC	A	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_4370:HG4_Ill_manta_3318:HG4_Ill_250bpfermikitraw_18599:HG4_Ill_150bpfermikitraw_17906:HG3_Ill_scalpel_13582:HG3_Ill_GATKHC_22453:HG3_Ill_GATKHCSBGrefine_9324:HG3_Ill_250bpfermikitraw_18324:HG2_Ill_scalpel_13318:HG2_Ill_Krunchall_19188:HG2_Ill_GATKHC_22569:HG2_Ill_GATKHCSBGrefine_9416:HG2_Ill_250bpfermikitraw_18848:HG2_Ill_150bpfermikitraw_17781:HG3_PB_pbsv_13808:HG2_PB_HySA_25750:HG3_Ill_Krunchall_18825:HG3_PB_HySA_21293:HG3_PB_assemblyticsfalcon_7015:HG2_PB_pbsv_14130:HG4_PB_pbsv_14095:HG3_Ill_manta_3192:HG2_Ill_manta_3899;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17781:HG2_Ill_250bpfermikitraw_18848:HG2_Ill_GATKHCSBGrefine_9416:HG2_Ill_GATKHC_22569:HG2_Ill_Krunchall_19188:HG2_Ill_scalpel_13318:HG3_Ill_250bpfermikitraw_18324:HG3_Ill_GATKHCSBGrefine_9324:HG3_Ill_GATKHC_22453:HG3_Ill_scalpel_13582:HG4_Ill_150bpfermikitraw_17906:HG4_Ill_250bpfermikitraw_18599;NumExactMatchSVs=12;ClusterMaxShiftDist=0.308943;ClusterMaxSizeDiff=0.308943;ClusterMaxEditDist=0.325203;PBcalls=6;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-65;DistBack=-29;DistForward=-31;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=13:63566297-63566364;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=967.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:14:0|1:36:0:0:12:./.:1:19:33:3:0/1:22:26:./.:.:.:.:.:.
chr13	63656183	HG2_10X_SVrefine210Xhap12_9827	CAAGAACTAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG4_10X_allpass_2639:HG4_PB_assemblyticsfalcon_6918:HG2_PB_pbsv_14131:HG2_Ill_Krunchall_19189:HG4_Ill_Spiral_1101:HG2_Ill_Spiral_941:HG4_PB_pbsv_14096:HG2_PB_HySA_25754:HG4_Ill_MetaSV_1358:HG2_Ill_tnscope_1559:HG2_Ill_MetaSV_1272:HG4_PB_SVrefine2Falcon1Dovetail_8585:HG4_Ill_manta_3319:HG4_Ill_GATKHCSBGrefine_9716:HG3_PB_SVrefine2Falcon1Dovetail_8540:HG2_PB_SVrefine2PB10Xhap12_10204:HG2_Ill_manta_3900:HG2_Ill_breakscan11_2012:HG2_Ill_GATKHCSBGrefine_9417:HG2_10X_allpass_2253:HG2_10X_SVrefine210Xhap12_9827;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9827:HG2_10X_allpass_2253:HG2_Ill_GATKHCSBGrefine_9417:HG2_Ill_breakscan11_2012:HG2_Ill_manta_3900:HG2_PB_SVrefine2PB10Xhap12_10204:HG3_PB_SVrefine2Falcon1Dovetail_8540:HG4_Ill_GATKHCSBGrefine_9716:HG4_Ill_manta_3319:HG4_PB_SVrefine2Falcon1Dovetail_8585;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.0588235;PBcalls=7;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-83;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=13:63656184-63656520;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=968.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:0|1:30:1:0:28:0|1:46:0:0:39:0/1:21:24:0/1:20:10:.:.:.
chr13	64903298	HG3_Ill_SVrefine2DISCOVARDovetail_10141	TCTAATTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCAGACTGCAGTGGCGCAGTCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9024:HG3_10X_allpass_2745:HG2_10X_allpass_2254:HG2_PB_assemblyticsfalcon_7024:HG3_Ill_Krunchall_18839:HG2_Ill_Krunchall_19202:HG3_Ill_MetaSV_1398:HG2_Ill_tnscope_1560:HG4_PB_SVrefine2Falcon1Dovetail_8590:HG3_PB_pbsv_13814:HG3_PB_SVrefine2PBcRDovetail_6660:HG3_PB_SVrefine2Falcon1Dovetail_8545:HG3_Ill_scalpel_13595:HG3_Ill_manta_3194:HG3_Ill_SVrefine2DISCOVARDovetail_10141:HG3_Ill_GATKHCSBGrefine_9329:HG2_PB_pbsv_14136:HG2_PB_SVrefine2PB10Xhap12_10207:HG2_PB_SVrefine2Falcon1plusDovetail_3025:HG2_Ill_manta_3902:HG2_Ill_SpiralSDKrefine_4379:HG2_Ill_MetaSV_1274:HG2_Ill_GATKHCSBGrefine_9420:HG2_10X_SVrefine210Xhap12_9832;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9832:HG2_Ill_GATKHCSBGrefine_9420:HG2_Ill_MetaSV_1274:HG2_Ill_SpiralSDKrefine_4379:HG2_Ill_manta_3902:HG2_PB_SVrefine2Falcon1plusDovetail_3025:HG2_PB_SVrefine2PB10Xhap12_10207:HG2_PB_pbsv_14136:HG3_Ill_GATKHCSBGrefine_9329:HG3_Ill_SVrefine2DISCOVARDovetail_10141:HG3_Ill_manta_3194:HG3_Ill_scalpel_13595:HG3_PB_SVrefine2Falcon1Dovetail_8545:HG3_PB_SVrefine2PBcRDovetail_6660:HG3_PB_pbsv_13814:HG4_PB_SVrefine2Falcon1Dovetail_8590;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0546624;ClusterMaxSizeDiff=0.0546624;ClusterMaxEditDist=0.0546624;PBcalls=9;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=-315;DistForward=-286;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=13:64903299-64903621;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=969.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:37:0|1:44:2:2:31:1|0:0:28:52:0:0/1:35:25:0/1:26:9:.:.:.
chr13	65342427	HG2_PB_pbsv_14140	AATTTTTGTATTTTTAGTAGAGATGGGGTTTCATCCACCCAACTTGACCTCCCAAAGTGCTGGGATTGGAGACCTGAATCCCCACGCCAGACCTTTTTTAAACCATTATTCTTACCTCATATGGCAAGATATACAAAATTACTTCACAGAGCCTGAAAGTCCTCTGGGTAGAACCCCATTCTACTTTCAAATGTTTCCTCTCATCCTTATAAACAAGCACTCTACACATCTACATAGATATATTTGCAATGGTTACATGCTCTTATGGCTCATTCTATTTTTAACTCATGTTATTCCCCTCTTTATCTCTTCTTCACCTTTGCCCCCCAAAATGTCTTTTCCATCTACCTGATGAATTACTGCTTATCTTTCAAAATGTATTAGAAATATTTCCTCATCTATGTGTCATCTTCTGATACCCTGAAATCCAATATCGTTATTAATTCTTTGCTGTGTTTCTTATTATCCCAAGTATATTCTTACGAAAGAACTTATCATATCTCTTTCCATGTTTTCATGTCTCTTTCCCATTAGACTAAAATCTTTGAGAACAAGTATTACTGTGTAACACTGAGTGTTGCAATCCCACAGCCTTGCTATACACATATTACCCAAAAGGTTCTCAGTAATAATCCTGTAAAGAAAGTAATTCATTTCTGATATTTAAACACCACACTGAAAAGCCTTGTACTGTGCTTACTCATAAATTAAGAAAAAAGTCTTATTAACAAGTTTTATTTTCTTACTTAAAGTAATAAAATTCTAAGAGAAAATAAAAAGTTTTACATTTTACATTATAAATTTTTAATGTCTTATATGGGATGTTTTCTAAAATATATAACTCTTCTATTCTAAAATTGTAAACTGATATTTAGCATAATATTAATAAATTTTTATATGGACACCTATGATTGTCAAAGCACTTTTAGAAACTTAAATTTAAATGACTATAAAACTTGAAAACTTGTTTTTATGATTTTTTTTAAAAGCTATTTTTCCTGCTGTTGTATTTGCTCCCTGAAAGTCCAGAGTGAACTGTCTCATTATTGTTATATAAATTATTTCATCAGTGAAGTGTTTGCAAATGAAATGCAGAGCTTTAAGTGACACGAAGTGCAGGATTTGTAGAACATAGCTAGTAAAACATAAAACTTGTAAAAAGGTTTTGTAGGGAATATTGAGTTCATATTCCATTTTACCCAAAGCTCTATTTAGCAAGATTTTCTTTTATTACCTTGCAATTCATCAAGCATGAGTAATTTCCCCATCAATTCTTTTATCCAGTGGCAACATAAACACTCACACTTTCTGAAATAAAGGAGTTGGAGTATTATGGTTGCTCTGTTCAAGCAGCTATCTTTAAAGTTGTGTCAGCATTTCCATTACATACCCAGTTTCTTGAAGTTTATAACTCGCAGTAAAAACTAACCCTTGGGTTGAATCTTTACTTACAGAGGTATTTTTCAGTTCAACTTATGGAGATATAGCTGCAAGACACCCCATTTCTGTTAATAGAAGCCAGGTCATGAATCCCTTCCTGACACATGGAACAGATTTATCCTGTCACTTTTCTACTGGGAGAAAATTATTTTCATCAAAATGGGAGAAGTATTTTGGTTTGATTTCAGTGAAGTTATAAAGTGCAATACCTATCTCGTGAAGGTATGAATTTTCAATAGCTTTTCTATACTTACGGCAAACTCACTTATTTTTTCTCCCAAAAGTGACCTTGGTAAAGTATAAGCTAGTTGGTTCTACTCAGGTAAAGCTAAAACTAAGCTCATATTATTTTTTCTTCAAAATATATTTTCTTTCTTGAGCATGCCACTAAAAGATAGAAACAATTTAAAATATGTTTTACAAAAGAAAGTAAAATAATGAATTTGATGATTATTAGTACACTCCAGTTCTACCTGTGGGATATACATGAGTTACATTTGCATCCTATAGTTATTTGTTGGGATGCAGATGGAAGTCATGTGTATGCTGTAGGTAGC	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3367:HG4_PB_assemblyticsfalcon_6929:HG2_PB_assemblyticsfalcon_7030:HG2_PB_assemblyticsPBcR_6776:HG4_10X_allpass_2640:HG2_10X_allpass_2255:HG4_PB_SVrefine2PBcRDovetail_7057:HG4_PB_SVrefine2Falcon1Dovetail_8591:HG2_Ill_Krunchall_19206:HG4_Ill_Krunchall_19514:HG2_PB_pbsv_14140:HG2_PB_SVrefine2PBcRplusDovetail_2862:HG2_PB_SVrefine2Falcon1plusDovetail_3027:HG2_Ill_breakscan11_2014:HG2_10X_SVrefine210Xhap12_9835:HG2_Ill_tnscope_1561:HG4_PB_pbsv_14103:HG2_Ill_MetaSV_1276:HG4_Ill_MetaSV_1361;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9835:HG2_Ill_breakscan11_2014:HG2_PB_SVrefine2Falcon1plusDovetail_3027:HG2_PB_SVrefine2PBcRplusDovetail_2862:HG2_PB_pbsv_14140:HG4_Ill_Krunchall_19514;NumExactMatchSVs=6;ClusterMaxShiftDist=0.140764;ClusterMaxSizeDiff=0.140764;ClusterMaxEditDist=0.140764;PBcalls=9;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1996;DistBack=12511;DistForward=-1992;DistMin=-1992;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=13:65342428-65344436;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=970.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:35:0|1:18:0:1:15:0|1:59:0:0:20:0/1:46:14:0/1:168:69:1549:.:.
chr13	65637808	HG2_PB_assemblyticsfalcon_7032	TAACAAGTATCTAGTATTTTAGAAGGGCTAGTGAATAATAATTATAAGTAATACATAAAAGTACTTATAATTATTAGATAATAAGAATGTTTAGCATAATTTTGTATTAAGTATTGTTGTAGAAATGAACATAGGGCTGTAAAAAAGAATAGGTTTGCCAATTCGAACTTTTCAGATGTGAGATTTAAATTTTTCCACAAGTGTTAGAAGAAGAGCGAGCAGTGGAAACAGCAAATGTAAACACTCTGAGGTTAGTACATACTTGAAACTGTGCCAGTATGATTTCAGCATAATCAGTCAGGCTTAGTGTGACATGAGCTGAGGTTTGAATAAAGTCACTGTAATGCAGAACTTTGAGAGCCAAGGAAAGAAACAGAGATTTAATTCTAAAGGCAATGAAGAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10209:HG3_10X_allpass_2746:HG2_Ill_tnscope_1562:HG2_Ill_MetaSV_1277:HG2_PB_PB10Xdip_9033:HG3_PB_SVrefine2PBcRDovetail_6661:HG3_Ill_manta_3196:HG3_Ill_SVrefine2DISCOVARDovetail_10144:HG3_Ill_GATKHCSBGrefine_9333:HG2_PB_pbsv_14141:HG2_PB_assemblyticsfalcon_7032:HG2_PB_SVrefine2PB10Xhap12_10210:HG2_PB_SVrefine2Falcon1plusDovetail_3028:HG2_PB_PB10Xdip_9032:HG2_Ill_manta_3904:HG2_Ill_breakscan11_2015:HG2_Ill_SpiralSDKrefine_4383:HG2_Ill_SVrefine2DISCOVARplusDovetail_3370:HG2_Ill_GATKHCSBGrefine_9422:HG2_10X_allpass_2256:HG2_10X_SVrefine210Xhap12_9836:HG3_PB_pbsv_13818:HG3_Ill_Spiral_14694:HG2_Ill_Spiral_942:HG3_Ill_Krunchall_18846:HG2_Ill_Krunchall_19208;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9836:HG2_10X_allpass_2256:HG2_Ill_GATKHCSBGrefine_9422:HG2_Ill_SVrefine2DISCOVARplusDovetail_3370:HG2_Ill_SpiralSDKrefine_4383:HG2_Ill_breakscan11_2015:HG2_Ill_manta_3904:HG2_PB_PB10Xdip_9032:HG2_PB_SVrefine2Falcon1plusDovetail_3028:HG2_PB_SVrefine2PB10Xhap12_10210:HG2_PB_assemblyticsfalcon_7032:HG2_PB_pbsv_14141:HG3_Ill_GATKHCSBGrefine_9333:HG3_Ill_SVrefine2DISCOVARDovetail_10144:HG3_Ill_manta_3196:HG3_PB_SVrefine2PBcRDovetail_6661;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0951248;ClusterMaxSizeDiff=0.0951248;ClusterMaxEditDist=0.0951248;PBcalls=9;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-402;DistBack=28305;DistForward=-403;DistMin=-403;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=13:65637809-65638210;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=971.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:32:./.:12:17:17:6:1|0:0:25:54:0:0/1:48:28:0/1:31:7:.:.:.
chr13	67897334	HG4_Ill_GATKHCSBGrefine_9720	TCCATGCATTTTTAAATATTTTAAGAAGTATATATATATCCTTATGAATATTGTTTTGCACACTTAA	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17808:HG2_PB_pbsv_14149:HG4_PB_assemblyticsfalcon_6940:HG3_PB_assemblyticsfalcon_7037:HG4_PB_pbsv_14110:HG3_PB_pbsv_13825:HG4_Ill_Krunchall_19530:HG4_Ill_GATKHCSBGrefine_9720:HG4_Ill_250bpfermikitraw_18628:HG3_Ill_Krunchall_18863:HG3_Ill_GATKHCSBGrefine_9335:HG3_Ill_250bpfermikitraw_18356:HG3_Ill_150bpfermikitraw_17854:HG2_PB_assemblyticsfalcon_7048:HG2_PB_assemblyticsPBcR_6790:HG2_Ill_Krunchall_19219:HG2_Ill_GATKHCSBGrefine_9424:HG2_Ill_250bpfermikitraw_18879;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17808:HG4_Ill_Krunchall_19530:HG4_Ill_GATKHCSBGrefine_9720:HG4_Ill_250bpfermikitraw_18628:HG3_Ill_Krunchall_18863:HG3_Ill_GATKHCSBGrefine_9335:HG3_Ill_250bpfermikitraw_18356:HG3_Ill_150bpfermikitraw_17854:HG2_PB_assemblyticsfalcon_7048:HG2_PB_assemblyticsPBcR_6790:HG2_Ill_Krunchall_19219:HG2_Ill_GATKHCSBGrefine_9424:HG2_Ill_250bpfermikitraw_18879;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.0769231;PBcalls=7;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=24217;DistForward=6003;DistMin=6003;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=132;REFWIDENED=13:67897335-67897532;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=972.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:50:1/1:0:15:3:23:./.:0:3:0:1:1/1:0:36:./.:.:.:.:.:.
chr13	67950542	HG4_Ill_GATKHC_22559	TGCTATCACTGAAATGTACTACTTTGACTTTGTAAAATTAGCCAGTCCTGACA	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_7040:HG4_PB_HySA_20590:HG3_PB_HySA_21316:HG4_PB_pbsv_14112:HG3_PB_pbsv_13826:HG2_PB_pbsv_14151:HG2_PB_HySA_25783:HG4_PB_assemblyticsfalcon_6943:HG4_PB_SVrefine2PBcRDovetail_7065:HG4_Ill_svaba_17661:HG4_Ill_scalpel_13040:HG4_Ill_manta_3323:HG4_Ill_SVrefine2DISCOVARDovetail_10026:HG4_Ill_Krunchall_19531:HG4_Ill_GATKHC_22559:HG4_Ill_GATKHCSBGrefine_9722:HG4_Ill_250bpfermikitraw_18629:HG4_Ill_150bpfermikitraw_17934:HG3_PB_assemblyticsfalcon_7039:HG3_PB_SVrefine2PBcRDovetail_6664:HG3_Ill_svaba_17797:HG3_Ill_scalpel_13607:HG3_Ill_manta_3198:HG3_Ill_SVrefine2DISCOVARDovetail_10153:HG3_Ill_Krunchall_18864:HG3_Ill_GATKHCSBGrefine_9336:HG3_Ill_250bpfermikitraw_18357:HG3_Ill_150bpfermikitraw_17855:HG2_PB_SVrefine2PBcRplusDovetail_2867:HG2_PB_SVrefine2PB10Xhap12_10218:HG2_PB_SVrefine2Falcon2Bionano_7038:HG2_PB_SVrefine2Falcon1plusDovetail_3034:HG2_Ill_svaba_17630:HG2_Ill_scalpel_13343:HG2_Ill_manta_3906:HG2_Ill_SpiralSDKrefine_4396:HG2_Ill_SVrefine2DISCOVARplusDovetail_3376:HG2_Ill_Krunchall_19220:HG2_Ill_GATKHCSBGrefine_9426:HG2_Ill_250bpfermikitraw_18880:HG2_Ill_150bpfermikitraw_17809:HG2_10X_SVrefine210Xhap12_9844:HG4_PB_assemblyticsfalcon_6942;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9844:HG2_Ill_150bpfermikitraw_17809:HG2_Ill_250bpfermikitraw_18880:HG2_Ill_GATKHCSBGrefine_9426:HG2_Ill_Krunchall_19220:HG2_Ill_SVrefine2DISCOVARplusDovetail_3376:HG2_Ill_SpiralSDKrefine_4396:HG2_Ill_manta_3906:HG2_Ill_scalpel_13343:HG2_Ill_svaba_17630:HG2_PB_SVrefine2Falcon1plusDovetail_3034:HG2_PB_SVrefine2Falcon2Bionano_7038:HG2_PB_SVrefine2PB10Xhap12_10218:HG2_PB_SVrefine2PBcRplusDovetail_2867:HG3_Ill_150bpfermikitraw_17855:HG3_Ill_250bpfermikitraw_18357:HG3_Ill_GATKHCSBGrefine_9336:HG3_Ill_Krunchall_18864:HG3_Ill_SVrefine2DISCOVARDovetail_10153:HG3_Ill_manta_3198:HG3_Ill_scalpel_13607:HG3_Ill_svaba_17797:HG3_PB_SVrefine2PBcRDovetail_6664:HG3_PB_assemblyticsfalcon_7039:HG4_Ill_150bpfermikitraw_17934:HG4_Ill_250bpfermikitraw_18629:HG4_Ill_GATKHCSBGrefine_9722:HG4_Ill_GATKHC_22559:HG4_Ill_Krunchall_19531:HG4_Ill_SVrefine2DISCOVARDovetail_10026:HG4_Ill_manta_3323:HG4_Ill_scalpel_13040:HG4_Ill_svaba_17661:HG4_PB_SVrefine2PBcRDovetail_7065:HG4_PB_assemblyticsfalcon_6943;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0380952;PBcalls=16;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=47070;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=13:67950543-67950646;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=973.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:1:32:1:18:1/1:0:13:0:23:1/1:0:49:./.:.:.:.:.:.
chr13	68936889	HG4_Ill_manta_3328	GCCTACATAATAACTTTTTATATGAATATATTATAGTTTAGTTTGTTACTTACGTAAAGTAGGTGATTATATTATCTCTAATATTCAGCAATTATAAATAAATATGTAAAAGATTTTTTTGTTTGTCAATATTTTCCTTTATTTATCTTATGAGAGGGTCCAAAATGTAGAACTGTAATGCACTAAAATATTAACATTGTAAGGTACCTCACAACATATTCCTATGTTGGTTTCTAACATGTTTGCAATAATCAATCTTTTGATTAGCAGTATTTAAGAATGCCCTCATAATCCCAGCAGTTTGGGAGGCTGATGTGGGCAGGTTGCTTGAGCTCACGAGATCTACACCAGCCTGGCAACAGGGCAAAATCTTGTCTC	AA	20	PASS	ClusterIDs=HG2_PB_pbsv_14162:HG4_Ill_GATKHCSBGrefine_9729:HG2_Ill_GATKHCSBGrefine_9435:HG2_Ill_tnscope_1563:HG2_Ill_SpiralSDKrefine_4399:HG4_PB_SVrefine2PBcRDovetail_7067:HG4_Ill_manta_3328:HG2_PB_assemblyticsPBcR_6798:HG2_PB_SVrefine2PBcRplusDovetail_2873:HG2_PB_SVrefine2PB10Xhap12_10226:HG2_PB_SVrefine2Falcon2Bionano_7043:HG2_Ill_manta_3909:HG2_Ill_SVrefine2DISCOVARplusDovetail_3379:HG2_10X_SVrefine210Xhap12_9849:HG4_Ill_MetaSV_1367:HG4_Ill_Spiral_1102:HG2_Ill_Spiral_943:HG4_PB_pbsv_14121:HG4_10X_allpass_2641:HG2_Ill_MetaSV_1283:HG2_10X_allpass_2258:HG2_PB_HySA_25797:HG4_Ill_Krunchall_19535:HG2_Ill_Krunchall_19227:HG2_PB_assemblyticsfalcon_7060:HG2_PB_SVrefine2Falcon1plusDovetail_3044;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9849:HG2_Ill_SVrefine2DISCOVARplusDovetail_3379:HG2_Ill_manta_3909:HG2_PB_SVrefine2Falcon2Bionano_7043:HG2_PB_SVrefine2PB10Xhap12_10226:HG2_PB_SVrefine2PBcRplusDovetail_2873:HG2_PB_assemblyticsPBcR_6798:HG4_Ill_manta_3328:HG4_PB_SVrefine2PBcRDovetail_7067;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0293725;ClusterMaxSizeDiff=0.0293725;ClusterMaxEditDist=0.0293725;PBcalls=10;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-376;DistBack=-113;DistForward=-115;DistMin=-115;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=13:68936889-68937266;PctSeqSimilarity=0.9987;PctSizeSimilarity=0.9947;PctRecOverlap=0.9974;SizeDiff=-2;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=975.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:38:0|1:46:1:1:34:0|1:42:0:0:31:0/1:49:32:0/1:30:8:.:.:.
chr13	69966662	HG4_Ill_GATKHCSBGrefine_9732	AAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1285:HG2_PB_HySA_25808:HG2_PB_assemblyticsfalcon_7075:HG4_Ill_Krunchall_19555:HG3_Ill_Krunchall_18883:HG4_PB_assemblyticsfalcon_6962:HG2_PB_assemblyticsPBcR_6811:HG4_PB_pbsv_14122:HG4_PB_SVrefine2PBcRDovetail_7068:HG4_PB_SVrefine2Falcon1Dovetail_8601:HG4_Ill_manta_3330:HG4_Ill_SVrefine2DISCOVARDovetail_10031:HG4_Ill_GATKHCSBGrefine_9732:HG4_10X_allpass_2643:HG3_PB_pbsv_13839:HG3_PB_assemblyticsfalcon_7062:HG3_PB_SVrefine2PBcRDovetail_6669:HG3_Ill_manta_3201:HG3_Ill_SVrefine2DISCOVARDovetail_10163:HG3_Ill_GATKHCSBGrefine_9345:HG3_10X_allpass_2748:HG2_PB_pbsv_14164:HG2_PB_SVrefine2PBcRplusDovetail_2875:HG2_PB_SVrefine2PB10Xhap12_10228:HG2_PB_SVrefine2Falcon2Bionano_7045:HG2_PB_SVrefine2Falcon1plusDovetail_3046:HG2_Ill_manta_3910:HG2_Ill_breakscan11_2016:HG2_Ill_SVrefine2DISCOVARplusDovetail_3380:HG2_Ill_GATKHCSBGrefine_9437:HG2_10X_SVrefine210Xhap12_9851:HG4_Ill_MetaSV_1369:HG3_Ill_MetaSV_1406:HG2_Ill_tnscope_1564;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9851:HG2_Ill_GATKHCSBGrefine_9437:HG2_Ill_SVrefine2DISCOVARplusDovetail_3380:HG2_Ill_breakscan11_2016:HG2_Ill_manta_3910:HG2_PB_SVrefine2Falcon1plusDovetail_3046:HG2_PB_SVrefine2Falcon2Bionano_7045:HG2_PB_SVrefine2PB10Xhap12_10228:HG2_PB_SVrefine2PBcRplusDovetail_2875:HG2_PB_pbsv_14164:HG3_10X_allpass_2748:HG3_Ill_GATKHCSBGrefine_9345:HG3_Ill_SVrefine2DISCOVARDovetail_10163:HG3_Ill_manta_3201:HG3_PB_SVrefine2PBcRDovetail_6669:HG3_PB_assemblyticsfalcon_7062:HG3_PB_pbsv_13839:HG4_10X_allpass_2643:HG4_Ill_GATKHCSBGrefine_9732:HG4_Ill_SVrefine2DISCOVARDovetail_10031:HG4_Ill_manta_3330:HG4_PB_SVrefine2Falcon1Dovetail_8601:HG4_PB_SVrefine2PBcRDovetail_7068:HG4_PB_pbsv_14122;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0302013;ClusterMaxSizeDiff=0.0302013;ClusterMaxEditDist=0.0302013;PBcalls=15;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-299;DistBack=2186;DistForward=-47;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=13:69966663-69966966;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=976.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:45:1/1:1:14:0:18:1/1:0:28:0:13:1/1:0:34:./.:2:9:.:.:.
chr13	70036391	HG2_PB_SVrefine2PB10Xhap12_10229	TAAGACTATTACAAGGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9852:HG4_PB_HySA_20605:HG4_PB_assemblyticsfalcon_6963:HG4_PB_SVrefine2Falcon1Dovetail_8602:HG2_PB_HySA_25809:HG4_PB_pbsv_14123:HG2_PB_assemblyticsPBcR_6812:HG2_Ill_tnscope_1565:HG4_PB_SVrefine2PBcRDovetail_7069:HG4_Ill_SVrefine2DISCOVARDovetail_10032:HG4_Ill_GATKHCSBGrefine_9733:HG3_PB_assemblyticsfalcon_7063:HG3_PB_SVrefine2Falcon1Dovetail_8556:HG2_PB_pbsv_14165:HG2_PB_assemblyticsfalcon_7076:HG2_PB_SVrefine2PBcRplusDovetail_2876:HG2_PB_SVrefine2PB10Xhap12_10229:HG2_PB_SVrefine2Falcon2Bionano_7046:HG2_PB_SVrefine2Falcon1plusDovetail_3047:HG2_Ill_GATKHCSBGrefine_9438;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9852:HG4_PB_SVrefine2PBcRDovetail_7069:HG4_Ill_SVrefine2DISCOVARDovetail_10032:HG4_Ill_GATKHCSBGrefine_9733:HG3_PB_assemblyticsfalcon_7063:HG3_PB_SVrefine2Falcon1Dovetail_8556:HG2_PB_pbsv_14165:HG2_PB_assemblyticsfalcon_7076:HG2_PB_SVrefine2PBcRplusDovetail_2876:HG2_PB_SVrefine2PB10Xhap12_10229:HG2_PB_SVrefine2Falcon2Bionano_7046:HG2_PB_SVrefine2Falcon1plusDovetail_3047:HG2_Ill_GATKHCSBGrefine_9438;NumExactMatchSVs=13;ClusterMaxShiftDist=0.108696;ClusterMaxSizeDiff=0.108696;ClusterMaxEditDist=0.108696;PBcalls=15;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-326;DistForward=-309;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=13:70036392-70036734;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=977.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:0|1:32:0:0:19:./.:30:0:0:2:0/1:15:18:0/1:24:6:.:.:.
chr13	70079642	HG3_Ill_scalpel_13621	GTGTGTGTATGTATGTGTATATATATATATATATATATATATATATATATATATA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_14125:HG2_PB_HySA_25811:HG2_PB_assemblyticsfalcon_7078:HG4_PB_assemblyticsfalcon_6965:HG4_Ill_scalpel_13059:HG4_Ill_manta_3331:HG4_Ill_Krunchall_19556:HG4_Ill_GATKHC_22580:HG4_Ill_GATKHCSBGrefine_9735:HG4_Ill_FB_12180:HG4_Ill_250bpfermikitraw_18647:HG4_Ill_150bpfermikitraw_17954:HG4_CG_vcfBeta_8992:HG3_PB_assemblyticsfalcon_7065:HG3_Ill_scalpel_13621:HG3_Ill_manta_3202:HG3_Ill_Krunchall_18884:HG3_Ill_GATKHC_22504:HG3_Ill_GATKHCSBGrefine_9346:HG3_Ill_250bpfermikitraw_18370:HG3_Ill_150bpfermikitraw_17871:HG3_10X_allpass_2749:HG2_PB_assemblyticsPBcR_6814:HG2_Ill_scalpel_13357:HG2_Ill_manta_3911:HG2_Ill_SpiralSDKrefine_4411:HG2_Ill_Krunchall_19243:HG2_Ill_GATKHC_22622:HG2_Ill_GATKHCSBGrefine_9440:HG2_Ill_250bpfermikitraw_18899:HG2_Ill_150bpfermikitraw_17828:HG2_CG_vcfBeta_7992:HG3_PB_HySA_21334:HG3_PB_pbsv_13840:HG2_PB_pbsv_14167;NumClusterSVs=35;ExactMatchIDs=HG2_CG_vcfBeta_7992:HG2_Ill_150bpfermikitraw_17828:HG2_Ill_250bpfermikitraw_18899:HG2_Ill_GATKHCSBGrefine_9440:HG2_Ill_GATKHC_22622:HG2_Ill_Krunchall_19243:HG2_Ill_SpiralSDKrefine_4411:HG2_Ill_manta_3911:HG2_Ill_scalpel_13357:HG2_PB_assemblyticsPBcR_6814:HG3_10X_allpass_2749:HG3_Ill_150bpfermikitraw_17871:HG3_Ill_250bpfermikitraw_18370:HG3_Ill_GATKHCSBGrefine_9346:HG3_Ill_GATKHC_22504:HG3_Ill_Krunchall_18884:HG3_Ill_manta_3202:HG3_Ill_scalpel_13621:HG3_PB_assemblyticsfalcon_7065:HG4_CG_vcfBeta_8992:HG4_Ill_150bpfermikitraw_17954:HG4_Ill_250bpfermikitraw_18647:HG4_Ill_FB_12180:HG4_Ill_GATKHCSBGrefine_9735:HG4_Ill_GATKHC_22580:HG4_Ill_Krunchall_19556:HG4_Ill_manta_3331:HG4_Ill_scalpel_13059:HG4_PB_assemblyticsfalcon_6965;NumExactMatchSVs=29;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0740741;PBcalls=9;Illcalls=23;TenXcalls=1;CGcalls=2;PBexactcalls=3;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=2;HG2count=13;HG3count=11;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-54;DistBack=11470;DistForward=11361;DistMin=11361;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=13:70079641-70079698;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=978.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:74:1/1:2:33:0:35:./.:1:16:1:15:1/1:0:49:./.:.:.:.:.:.
chr13	71865440	HG2_Ill_GATKHCSBGrefine_9448	ATTTTGGCTTAGGGGAAGGTCCCCTTTGATTGGTTGAAGTTTCAATCCCTTAGCTTGCAGCTATGACTTAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9858:HG4_PB_pbsv_14134:HG2_PB_HySA_25826:HG4_Ill_svaba_17694:HG4_Ill_manta_3335:HG4_Ill_Krunchall_19573:HG4_Ill_GATKHC_22600:HG4_Ill_GATKHCSBGrefine_9743:HG4_Ill_250bpfermikitraw_18664:HG4_Ill_150bpfermikitraw_17973:HG4_10X_allpass_2645:HG2_Ill_svaba_17662:HG2_Ill_Krunchall_19261:HG2_Ill_GATKHC_22637:HG2_Ill_GATKHCSBGrefine_9448:HG2_Ill_250bpfermikitraw_18915:HG2_Ill_150bpfermikitraw_17844:HG2_PB_pbsv_14177:HG4_PB_SVrefine2PBcRDovetail_7075:HG2_PB_SVrefine2PBcRplusDovetail_2884:HG2_PB_SVrefine2PB10Xhap12_10237:HG2_PB_SVrefine2Falcon2Bionano_7054:HG2_PB_SVrefine2Falcon1plusDovetail_3055:HG2_Ill_SVrefine2DISCOVARplusDovetail_3392;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17844:HG2_Ill_250bpfermikitraw_18915:HG2_Ill_GATKHCSBGrefine_9448:HG2_Ill_GATKHC_22637:HG2_Ill_Krunchall_19261:HG2_Ill_svaba_17662:HG4_10X_allpass_2645:HG4_Ill_150bpfermikitraw_17973:HG4_Ill_250bpfermikitraw_18664:HG4_Ill_GATKHCSBGrefine_9743:HG4_Ill_GATKHC_22600:HG4_Ill_Krunchall_19573:HG4_Ill_manta_3335:HG4_Ill_svaba_17694;NumExactMatchSVs=14;ClusterMaxShiftDist=0.028169;ClusterMaxSizeDiff=0.028169;ClusterMaxEditDist=0.0714286;PBcalls=8;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-70;DistBack=-62;DistForward=-47;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=69;REFWIDENED=13:71865397-71865535;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=979.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:24:./.:19:11:5:11:0|1:33:1:0:14:0/1:29:29:./.:.:.:.:.:.
chr13	72308239	HG2_PB_SVrefine2Falcon1plusDovetail_3056	TATATATGTATATGGGATACATATATACCCCATATATATGTATATCCCATATACGTATACCCCATATATATGTATATCCCATATACGTATACCCATATATATGTATATCCCATATACGTATACCCCATATATATGTATATCCCATATACGTATACCCCATATATATGTATATCCCATATACGTATACCCCATATATATGTATATCCCATATACGTATACCCCATATATATGTATATCCCATATACGTATACCCC	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7076:HG4_PB_assemblyticsfalcon_6981:HG4_PB_SVrefine2Falcon1Dovetail_8610:HG3_PB_assemblyticsfalcon_7082:HG3_PB_SVrefine2Falcon1Dovetail_8564:HG2_PB_SVrefine2Falcon2Bionano_7055:HG4_PB_pbsv_14135:HG2_PB_pbsv_14178:HG3_PB_pbsv_13849:HG3_PB_SVrefine2PBcRDovetail_6675:HG3_Ill_SVrefine2DISCOVARDovetail_10174:HG2_PB_SVrefine2Falcon1plusDovetail_3056:HG2_Ill_SVrefine2DISCOVARplusDovetail_3395:HG4_Ill_SVrefine2DISCOVARDovetail_10046:HG2_PB_SVrefine2PBcRplusDovetail_2885:HG2_PB_SVrefine2PB10Xhap12_10238;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3395:HG2_PB_SVrefine2Falcon1plusDovetail_3056:HG3_Ill_SVrefine2DISCOVARDovetail_10174:HG3_PB_SVrefine2PBcRDovetail_6675;NumExactMatchSVs=4;ClusterMaxShiftDist=0.25;ClusterMaxSizeDiff=0.25;ClusterMaxEditDist=0.25;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-253;DistBack=-382;DistForward=-182;DistMin=-382;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=544;REFWIDENED=13:72308240-72309015;PctSeqSimilarity=0.9359;PctSizeSimilarity=0.9922;PctRecOverlap=0.6953;SizeDiff=-2;StartDistance=-76;EndDistance=-78;GTMatch=0;TruScore=87;MatchId=980.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:48:1/1:6:29:4:16:0/0:24:2:17:0:./.:15:1:./.:.:.:.:.:.
chr13	72386637	HG2_Ill_SpiralSDKrefine_4424	GCATCAAAATGGCACCATCAGAAACACATCAAAATGGCACCATCAGAAACA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17848:HG4_PB_assemblyticsfalcon_6982:HG3_PB_assemblyticsfalcon_7083:HG2_PB_HySA_25832:HG2_PB_assemblyticsfalcon_7098:HG3_PB_pbsv_13850:HG2_PB_pbsv_14179:HG4_PB_HySA_20626:HG4_Ill_svaba_17699:HG4_Ill_Krunchall_19578:HG4_Ill_GATKHC_22607:HG4_Ill_GATKHCSBGrefine_9744:HG4_Ill_250bpfermikitraw_18668:HG4_Ill_150bpfermikitraw_17978:HG3_PB_HySA_21349:HG3_Ill_svaba_17833:HG3_Ill_Krunchall_18904:HG3_Ill_GATKHC_22526:HG3_Ill_GATKHCSBGrefine_9355:HG3_Ill_250bpfermikitraw_18390:HG3_Ill_150bpfermikitraw_17892:HG2_PB_assemblyticsPBcR_6833:HG2_Ill_svaba_17667:HG2_Ill_scalpel_13372:HG2_Ill_SpiralSDKrefine_4424:HG2_Ill_Krunchall_19264:HG2_Ill_GATKHC_22644:HG2_Ill_GATKHCSBGrefine_9449:HG2_Ill_250bpfermikitraw_18920;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17848:HG4_PB_HySA_20626:HG4_Ill_svaba_17699:HG4_Ill_Krunchall_19578:HG4_Ill_GATKHC_22607:HG4_Ill_GATKHCSBGrefine_9744:HG4_Ill_250bpfermikitraw_18668:HG4_Ill_150bpfermikitraw_17978:HG3_PB_HySA_21349:HG3_Ill_svaba_17833:HG3_Ill_Krunchall_18904:HG3_Ill_GATKHC_22526:HG3_Ill_GATKHCSBGrefine_9355:HG3_Ill_250bpfermikitraw_18390:HG3_Ill_150bpfermikitraw_17892:HG2_PB_assemblyticsPBcR_6833:HG2_Ill_svaba_17667:HG2_Ill_scalpel_13372:HG2_Ill_SpiralSDKrefine_4424:HG2_Ill_Krunchall_19264:HG2_Ill_GATKHC_22644:HG2_Ill_GATKHCSBGrefine_9449:HG2_Ill_250bpfermikitraw_18920;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0784314;PBcalls=9;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=33219;DistForward=4025;DistMin=4025;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=45;REFWIDENED=13:72386638-72386732;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=981.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:7:35:2:20:1/1:0:21:0:16:1/1:0:60:./.:.:.:.:.:.
chr13	72477264	HG3_Ill_MetaSV_1408	CCTGATCAATGCCTCTCAAATTTTAGTTTGAAACACCTGAGCAAATTGAGGCCTCATGCTCATTTAAAAAAACTGAAATAGGCGAGGCAGTGACTCATGCCTGGAATCCCAGCAATTTGGGAGGCTGAGGCAGGTGGATTGCTTGAGTCCAGGAGTTTATGACCAGCCTGGGTGACACAGTGAGACCTCATCTCTACCAAAAATAAAAATTTAGCCGGGAGTGATGGCGTACACGTGTAGCCCTAGCTACTTGGGAGGCTGAGGTGGGAGGATCAGGATCTTGAGCCCTGGAAACGAAGTTTGCAGTGAGAGCTGTGATTGCACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACCCTGTCACAAAAGAATAATAATAATAAATAGAATAGAAAATATCAGGGCATGTTAATTTTTTAGTAGACTTCATTTTTGAAAGCAGTTTTAGGTTCACAGCAGAATTGAGCGGTATGTACAGTTACCATTTACCCCTCACCATGACCCCCTCCACGACCTCCCCCACAATCAACATCACCCACCGGAGTGGCACATTTGTTACATTTCATGGGCCTATTGACACAACATTATCACCTAACGTCCATAGTTTACTTCAGAGTTCACTTTTGGTGTTACACATTCTATGGGTTTGGACAAATGTATGCCATGTATTCACCGCACGGAAGACTTTACTGCCCTAAAAATTCTTTGTACTCTGCCTATTCATCCCTCTCTCTACCTTCATATCAACTTTTAAATATCATTTCACAGAGTTTTAATTTCTATTTTTAAACATATATTTAGCTATGGTTATATATTCATTTTATACCTGTTTCTGTGTGCTGAGTGATAAGGTAAAATGCATTTCTTCCTGAGGGTTTTGGTCAAAATATGTGAAAGTCACCGTTCTATGTCATAACCAGATTCCCTATAGGATAAGTTTCTGCATTTAGATTATAGCAAGAAGAGGTCTCCTCTCCCTTCTTTGGAAGAAACCACATGATATAATTCCTCTTGGATTCATCCTGATACGTTCATGAGTATTAAAGGATTCCAAAAATTTGTTTTTTTCTGAACAAAATTTGTCTTTTAAAATTATTGTATTGCTGCAAAATCCTGTTATGAGTGTCAGAAACGGAATAGTAACTCTTTATTTTTGCATTCCTGCTATAACAAATCTAAGCTGGCTCCAATCCCCTCCATTCACACCACCGCTTCCATATGTACATGGATGCTTCTGGGAGGAATGCATGAAGGTCAGTACAAGGAAATGCAAACAGAAAAGCATATCACAGCATTTCAAAACCATAACCACACTATGCACCACTCCACAAACTCTGCAAAACCATCCAATAAAAGGATGAATTCTTTTTTGGTAAGAGTTTTTGTTTTACAAACTGGCATATTAATCCTCTCTGAATTTTCTTCCCACAGAGCAAACTTCACAATGGTCTGGACTAGGTTTTTATTGGTGGTATTGGGCTAAATATTTGAGTTTATGGAAGAGACACTTCAGGGTATGCATTTATGCACATGGAGAATTACTCTTTGTGTGATAATAATTGTTATCAACTATTAGAAAAGGGCAAGAGAAAAAAAGATATCAAATGCTGTAGAAAATCTTTACTGATAATTTTTAAATTTTAATCTTAAAATACATTATATTGAGTAATTATAAAATCTCTGGGAATTTTCAAAAGTAGTCTGAATATAAACATTGCTGAAATTATTAAAATTTGACTTTCAACTATTCTGTGCATGTGAATGTAGTTTGTTTTTTATTTCCTATCTCAATCTAAATATTTCCATTCTCTTCTCTGAAAGACTTTAAGTTTTTAAGTTGTGTAACTCTGGACAAATTTTCAAGCCCTCTAAATCTCTGTTTCCTCAACTACAAAATGCCAATAATAGTAACTGTTTTCAAATCTCCAAATACTGCTGGGCAGACATAAAATGCATGGATGCATATGTGTTTAGCACAGAGCAGGTGTTTAGGAGTTGTAGTGGTTATTCTTTTCTTTCTTCCTTTGGAACTTCTGGGCTCAAGTGATCTTCCTGTCCCAGCCTCCCAAGCAGCTAAGACTACAAGAGTGCACCACCATGCCCAGCTACTTTTCCTTAATTTTTTTTTTCTTTTAGATATGGTGTCTCACTATGTTGCCGATACTTGTCTTGAATTCCTGAGCTCAAGTAAACTTCTTGCCTCTGCCTCTCAAAGCACTGGAATTACAGTTTCTTCCTTTCTTCCTCTCCTCCTAAGGCCTCCTCCACCACCTTGGAATAAACCGCCTAGCTTGGCAATGTAACTTCAAATGATAACACTGCTTGTATGAAAAATTTGGTGTGTTCAGAATTCCTTACAACTGAGTTAAAAATAATCTATGAAACACAATCTATTTTACTAGAAATTGGCTGCACATGAATTTAAGGACATCTAAATTTCCAGAGCATTTATCACTCATAAGGAAGCTGGTAGGAAAAATAACTGGAAATGAGATGAGAGCTGTAGTGAGTATTGGGCATGGGAAGGGAGAAGACTTCTCCCCCATAACTGAGCTTGAAATAACAACTTTTTAGGGTCCATTTTACTTCCCCTGCATGTTAAAAATTAATAGGCATCATTTTCAGAGCAGTTTTAGATATAAAGAAATAATTGATAAGAAAGTACAGAGAGCTCTTATCTATCCACCCTCAGTTTCCCTGTCAGTAATATCTTGAATTACTTTGTTATAATTGGTAAAGGCATACTAACACATTAACTAAAGTACATAATTTACATTAGGGTTCCCTTTTTGTGCTGTACAGCTCTATATATTTTAACAAATGCATAATGTCATGTGTTTACCATTACAGTAGGATAAAGAACAGTCTCATTGCCTTAAAAAGTTCCCTAACATTTTAATTGTTCAGACAGCTACTCAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGATTCTAGATGGGAAATACATGGCAAAGTAAGAGGGAAGAAGGAATTAGGAGCCTATATATTTGTTACTTATTCAGTAAATACTTATTGATCATCTACTATGTTACTGGAATGTTTGCTAAGTGTCATGGATAATACAGTGAATTAAATATACTTGCCTATTGGGTAAGACAAATTAAAAAAAATCACAAATAATTACCCATTGTGGTAAGTACCATGTTGGATGTTGTGAAGAAATATTGCAGGGATTTGTAACATAGATGGACAAGACAGGGAAGAGTCTCTGAAGCAGCGAGAGTGTAGGTGAGCCAGACATTGGCTGGTGCATAGCCAGAAAAGCTCCATGAAGAGTGG	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1289:HG2_Ill_breakscan11_2017:HG3_Ill_Krunchall_18907:HG3_10X_allpass_2751:HG2_Ill_Krunchall_19267:HG2_10X_allpass_2261:HG2_PB_assemblyticsPBcR_6836:HG4_PB_assemblyticsfalcon_6983:HG3_PB_pbsv_13851:HG3_PB_assemblyticsfalcon_7085:HG3_PB_SVrefine2PBcRDovetail_6676:HG3_Ill_SVrefine2DISCOVARDovetail_10176:HG3_Ill_MetaSV_1408:HG3_Ill_GATKHCSBGrefine_9356:HG2_PB_pbsv_14180:HG2_PB_SVrefine2PBcRplusDovetail_2886:HG2_PB_SVrefine2PB10Xhap12_10239:HG2_Ill_SVrefine2DISCOVARplusDovetail_3397:HG2_10X_SVrefine210Xhap12_9862:HG2_Ill_tnscope_1566;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9862:HG2_Ill_SVrefine2DISCOVARplusDovetail_3397:HG2_PB_SVrefine2PB10Xhap12_10239:HG2_PB_SVrefine2PBcRplusDovetail_2886:HG2_PB_pbsv_14180:HG3_Ill_GATKHCSBGrefine_9356:HG3_Ill_MetaSV_1408:HG3_Ill_SVrefine2DISCOVARDovetail_10176:HG3_PB_SVrefine2PBcRDovetail_6676:HG3_PB_assemblyticsfalcon_7085:HG3_PB_pbsv_13851:HG4_PB_assemblyticsfalcon_6983;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00150943;ClusterMaxSizeDiff=0.00150943;ClusterMaxEditDist=0.00150943;PBcalls=8;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-3312;DistBack=81639;DistForward=-3312;DistMin=-3312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=13:72477265-72480577;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=982.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:42:1|0:4:23:29:1:1|0:0:30:46:0:0/1:53:11:0/1:228:137:3403:.:.
chr13	72843038	HG3_Ill_SVrefine2DISCOVARDovetail_10177	TTCAACTATGTGGTCAATTTTGGAATAGGTGCAGTGTGGTGCTGAAAAGAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTACTTGGTGCAGAGCTGAGTTCAATTCCTGGATATCCTTGTTAACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTATTGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTAAGGACTTGCTTTATGAATCTGGGTGCTCCTTTATTGGGTGCATATATATTTAGGATAGTTAGCTCTTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCTGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTTCTTGGTAGATCTTCCTCCATCCCTTTATTTTGAGCCTATATGTGTCTCTGAATATGAGATGGGTTTTCTGAATACAGCACACTGATGGGTCTTGACTCGTTATCCAATTTGCCAGTCTGTGTCTTTTAATTGGAGCATTTAGCCCATTTACATTTAAGGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTATTTTGCTCGTTAGTTGATGCAGTTTCTTCCTAGCCTTGATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTATCGGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTAGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATACGGGCCCCCACTCTCTTCTGGCTTGTAGAGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCCTTTGTGGGTAACTCGACCTTTCTCTCTGGCTGCCCTTAGCATTTTTTCCTTCATTTCATCTTTGGCGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCATTCTCTGTATTTCCTGAATGTGAATGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCCTGTCCCTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGTTCGTTTCTTTTTTCTCTAAACTTCTCTTCTCGTTTCATTTCATTCATTTCATCTTCCATCGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTACTGAGGCTTATGCATTCATCGCGTAGTTCTTGTGCCATGGTTTTCAGCTCCATCAGGTCCTTTAAGGACTTCTCTGCATTGGTTATTCTAGTTAGCCATTCATCTAATTTTTTTTCAAGGTTTTTAACTTCTTTGTCATTGGTTTGAACTTCCTCCTTTAGCTCGGAGTAGTTTGATCTTCTGAAGCCTTCTTCTCTCAACTCGTCAAAGTCACTCTCCAACCAGCGTTGTTTCATTGCTGGTGAAGAGCTGCGTTCCTTTGGAGGAGGAGAGGTGCTCTGATTTTTAGAGTTTCCGGTTTTTCTGCTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACCTTTGGTCTTTGATGATGGTGACGTACAGATGGGTTTTTGGTGTGGATGTCCTTTCTGTTTGTTAGTTTTCCTTCTAACAGTCAGGACCCTCAGCTGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGTATCAGCAGCAGTGGCTGCAGAACAGCAGATATTGGTGAACCACAAATGCTGCTGCCTGATAGTTCCTCTGAAAGTTTTGTCTCAGAGGAGTACCCAGCCGTGTGAGGTGTCAGTCTGCCCCTACTGGGGGGTGCCTCCCAGCTAGGCTACTCGGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCATTCTCAGATCTCAAGCTGCGTGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAGGTTACTGCTGCCTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGCGGTGGGCTCCACCCAGTTCGAGATTCCAGGCCACTTTGTTTACCTACTCAATCCTCTGCAATGGTGGGCGCCCCTCCCCCAGCTTCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATGAGTGAGGCTCTATGGGCGTAGTACCCTCTGAGCCAGGTGTGGGATATAATTTCCTGGTGTGCTGTTTGTTAAGCCCATTGGAAAAGCGCAGTACTAGGGTGGGAGTGACCTGATATTCCAGGTGCCATCTGTCACCCCTGTCTTTGACTAGGAAAGGGAAATCCCTGACCCCTTGCGCTTCCCGGGTAAGGCAATGCCTCGCCCTGCTTCAGCTCACGCACAGTGTGCTGCACCCACTGTCCTGCACCCACTGTCCAGCACTCCCCAGTGGGATGAACCTGGTATCTCTGTTGGAAATGCAGAAATCACCTGTCTTCTGGGTTGCTCACGCTGCGAGCTATAGACTGGAGCTGTTCCTATTCGCCCATCTTGGCTCCACCCCTATATTCTTATAAAATTCTTATCCAGATGATTTATCCTTTGCTGATTAAAATGAAGAAGACCATAAGTTTATTGTTAGATTTATATCTGCAACATGAAAGTGAATAAATCAAATGTAAATTCCATGTTATATGCAAATGTATTTGATTTATATAATCTAGCAAATTTACCAAGGAAATGTAAGGGTTTGCTACACACACGATATAAAATTTATATTATAAACCAGCATACTATCTGAAACACACACACAAAAACATGTTTGCGGTCTCCAAATTGTTTCGTCCTACAAGTATACGTAAATAGCTTTATAGTATGGAGAAAGCATTGAAATTTCTGGAATGGAATTTATTCATTTCAATCCACAAAACCAATCTAAATCTCATCCCCTGTAAAACCTTCAAACCTAGAATCCCGAATGTTCTTCAAGGCTAATATCTTGCTTGAAATTCAAATCCTACCAGGATATATATATCCTCTGGATTTGACAGTGTCCTTGTCTTCCTGGCATGACAGGAAGTCCAATGCTCTCAACATTTTATCTTAATTTTCATACTTTCTCCTCTCTGTGCATTAATTTTGTTCATATTAACTTTAGAAGTAGAGGTGATAATTCATTTATTTTAGATGACTTTTAGTTTATGTGTAGCAAGCAATTTCATATTCTATAAAAATTAAAATATTATGATTATAAGACTTTTAGTCAAGAACAAGATTTATTGTTGGGAGACACTGAAATTATATTACATAACTTTATAGTCATCCAGCCAAAGGGTAGATTAGTTTCATAGATAACTATGTTAATAATACTTTTTAATTTTCATATTATTAGTATAACTTTATATTTAGAAGAATTAGTGAACAAAATATTTATCCGTCTTGAGTACAGAGATTTTCTAACTGTCCTACATGAAATCTTTAGAAAAAAGAATCAAAGCTTTGTAGAACAAATGAATTTATTGAGAAATAAATTGGGCCATGTTTCTACTTTTAAAAATCAAGTTACATTTTAGTAAGTCTATGAAAACTTTTACCAAAAAAATCCATAATTAGGATGAATATACCAGTAAAACTGGCTCGCTATATTTTTTGGAAATATTTTCTGTTCTTATCAAGGATGCTTAACAGATATTATAGAGAAATAACAAGAAAAATTGGTAACAAAA	AAATTGCAG	20	PASS	ClusterIDs=HG2_Ill_Krunchall_19268:HG4_Ill_GATKHCSBGrefine_9747:HG3_Ill_GATKHCSBGrefine_9359:HG2_Ill_GATKHCSBGrefine_9452:HG4_PB_pbsv_14136:HG3_PB_pbsv_13853:HG2_PB_pbsv_14181:HG2_Ill_tnscope_1567:HG2_Ill_SpiralSDKrefine_4426:HG4_PB_assemblyticsfalcon_6984:HG4_PB_SVrefine2PBcRDovetail_7077:HG4_PB_SVrefine2Falcon1Dovetail_8611:HG4_Ill_SVrefine2DISCOVARDovetail_10048:HG3_PB_assemblyticsfalcon_7086:HG3_PB_SVrefine2PBcRDovetail_6677:HG3_PB_SVrefine2Falcon1Dovetail_8565:HG3_Ill_SVrefine2DISCOVARDovetail_10177:HG2_PB_assemblyticsPBcR_6837:HG2_PB_SVrefine2PBcRplusDovetail_2887:HG2_PB_SVrefine2PB10Xhap12_10240:HG2_PB_SVrefine2Falcon2Bionano_7056:HG2_PB_SVrefine2Falcon1plusDovetail_3057:HG2_PB_PB10Xdip_9094:HG2_PB_PB10Xdip_9093:HG2_Ill_SVrefine2DISCOVARplusDovetail_3398:HG2_10X_SVrefine210Xhap12_9863:HG4_PB_HySA_20629:HG3_PB_HySA_21351:HG2_Ill_MetaSV_1290:HG4_10X_allpass_2646:HG3_10X_allpass_2752:HG2_10X_allpass_2262:HG2_PB_assemblyticsfalcon_7102:HG4_Ill_MetaSV_1373:HG3_Ill_MetaSV_1409:HG4_Ill_Krunchall_19581:HG3_Ill_Krunchall_18909;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9863:HG2_Ill_SVrefine2DISCOVARplusDovetail_3398:HG2_PB_PB10Xdip_9093:HG2_PB_PB10Xdip_9094:HG2_PB_SVrefine2Falcon1plusDovetail_3057:HG2_PB_SVrefine2Falcon2Bionano_7056:HG2_PB_SVrefine2PB10Xhap12_10240:HG2_PB_SVrefine2PBcRplusDovetail_2887:HG2_PB_assemblyticsPBcR_6837:HG3_Ill_SVrefine2DISCOVARDovetail_10177:HG3_PB_SVrefine2Falcon1Dovetail_8565:HG3_PB_SVrefine2PBcRDovetail_6677:HG3_PB_assemblyticsfalcon_7086:HG4_Ill_SVrefine2DISCOVARDovetail_10048:HG4_PB_SVrefine2Falcon1Dovetail_8611:HG4_PB_SVrefine2PBcRDovetail_7077:HG4_PB_assemblyticsfalcon_6984;NumExactMatchSVs=17;ClusterMaxShiftDist=0.202464;ClusterMaxSizeDiff=0.202464;ClusterMaxEditDist=0.202464;PBcalls=19;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=13;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-3878;DistBack=-44;DistForward=-3841;DistMin=-3841;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=13:72843038-72846924;PctSeqSimilarity=0.9558;PctSizeSimilarity=0.9987;PctRecOverlap=0.999;SizeDiff=-5;StartDistance=1;EndDistance=4;GTMatch=0;TruScore=98;MatchId=983.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:109:1/1:0:23:0:27:1/1:0:52:0:39:1/1:0:31:1/1:1:288:4052:.:.
chr13	72956710	HG2_PB_SVrefine2Falcon1plusDovetail_3058	TAAAAAAAAGGGTTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_14738:HG3_PB_HySA_21352:HG2_PB_assemblyticsfalcon_7103:HG4_PB_assemblyticsfalcon_6985:HG3_PB_assemblyticsfalcon_7087:HG2_PB_assemblyticsPBcR_6838:HG4_PB_pbsv_14137:HG2_PB_pbsv_14182:HG4_Ill_Spiral_1103:HG2_Ill_Spiral_944:HG4_Ill_MetaSV_1374:HG3_Ill_MetaSV_1411:HG2_PB_HySA_25835:HG2_Ill_tnscope_1568:HG2_Ill_MetaSV_1291:HG4_PB_SVrefine2PBcRDovetail_7078:HG4_PB_SVrefine2Falcon1Dovetail_8612:HG4_PB_HySA_20630:HG4_Ill_scalpel_13075:HG4_Ill_SVrefine2DISCOVARDovetail_10049:HG4_Ill_GATKHCSBGrefine_9748:HG4_10X_allpass_2647:HG3_PB_SVrefine2PBcRDovetail_6678:HG3_PB_SVrefine2Falcon1Dovetail_8566:HG3_Ill_scalpel_13637:HG3_Ill_SVrefine2DISCOVARDovetail_10178:HG3_Ill_GATKHCSBGrefine_9361:HG2_PB_SVrefine2PBcRplusDovetail_2888:HG2_PB_SVrefine2PB10Xhap12_10241:HG2_PB_SVrefine2Falcon2Bionano_7057:HG2_PB_SVrefine2Falcon1plusDovetail_3058:HG2_Ill_scalpel_13375:HG2_Ill_manta_3917:HG2_Ill_SVrefine2DISCOVARplusDovetail_3399:HG2_Ill_GATKHCSBGrefine_9453:HG2_10X_SVrefine210Xhap12_9864:HG3_PB_pbsv_13854:HG3_Ill_Spiral_14739:HG3_Ill_GATKHCSBGrefine_9360:HG3_10X_allpass_2753;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9864:HG2_Ill_GATKHCSBGrefine_9453:HG2_Ill_SVrefine2DISCOVARplusDovetail_3399:HG2_Ill_manta_3917:HG2_Ill_scalpel_13375:HG2_PB_SVrefine2Falcon1plusDovetail_3058:HG2_PB_SVrefine2Falcon2Bionano_7057:HG2_PB_SVrefine2PB10Xhap12_10241:HG2_PB_SVrefine2PBcRplusDovetail_2888:HG3_Ill_GATKHCSBGrefine_9361:HG3_Ill_SVrefine2DISCOVARDovetail_10178:HG3_Ill_scalpel_13637:HG3_PB_SVrefine2Falcon1Dovetail_8566:HG3_PB_SVrefine2PBcRDovetail_6678:HG4_10X_allpass_2647:HG4_Ill_GATKHCSBGrefine_9748:HG4_Ill_SVrefine2DISCOVARDovetail_10049:HG4_Ill_scalpel_13075:HG4_PB_HySA_20630:HG4_PB_SVrefine2Falcon1Dovetail_8612:HG4_PB_SVrefine2PBcRDovetail_7078;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0949263;ClusterMaxSizeDiff=0.0949263;ClusterMaxEditDist=0.0949263;PBcalls=18;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=-411;DistForward=-297;DistMin=-411;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=13:72956711-72957034;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=984.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:1:39:0:16:1/1:0:26:0:26:1/1:0:17:./.:2:12:.:.:.
chr13	74074911	HG3_Ill_GATKHCSBGrefine_9365	TCTATCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGTAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCTATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_1104:HG4_PB_assemblyticsfalcon_6998:HG2_PB_assemblyticsPBcR_6850:HG2_PB_assemblyticsfalcon_7115:HG4_Ill_Krunchall_19596:HG3_Ill_Krunchall_18921:HG2_Ill_Krunchall_19283:HG3_Ill_Spiral_14748:HG2_Ill_Spiral_946:HG3_PB_pbsv_13863:HG2_PB_pbsv_14191:HG2_PB_HySA_25852:HG4_Ill_MetaSV_1376:HG3_Ill_MetaSV_1413:HG2_Ill_tnscope_1569:HG2_Ill_MetaSV_1296:HG4_PB_pbsv_14144:HG4_PB_SVrefine2Falcon1Dovetail_8617:HG4_Ill_svaba_17716:HG4_Ill_scalpel_13085:HG4_Ill_SVrefine2DISCOVARDovetail_10054:HG4_Ill_GATKHCSBGrefine_9757:HG4_10X_allpass_2648:HG3_PB_SVrefine2PBcRDovetail_6681:HG3_PB_SVrefine2Falcon1Dovetail_8573:HG3_Ill_svaba_17848:HG3_Ill_scalpel_13647:HG3_Ill_manta_3209:HG3_Ill_SVrefine2DISCOVARDovetail_10185:HG3_Ill_GATKHCSBGrefine_9365:HG3_10X_allpass_2754:HG2_PB_SVrefine2PBcRplusDovetail_2892:HG2_PB_SVrefine2PB10Xhap12_10249:HG2_PB_SVrefine2Falcon2Bionano_7063:HG2_PB_SVrefine2Falcon1plusDovetail_3063:HG2_Ill_svaba_17686:HG2_Ill_scalpel_13387:HG2_Ill_manta_3919:HG2_Ill_breakscan11_2018:HG2_Ill_SpiralSDKrefine_4437:HG2_Ill_SVrefine2DISCOVARplusDovetail_3405:HG2_Ill_GATKHCSBGrefine_9459:HG2_10X_allpass_2263:HG2_10X_SVrefine210Xhap12_9867;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9867:HG2_10X_allpass_2263:HG2_Ill_GATKHCSBGrefine_9459:HG2_Ill_SVrefine2DISCOVARplusDovetail_3405:HG2_Ill_SpiralSDKrefine_4437:HG2_Ill_breakscan11_2018:HG2_Ill_manta_3919:HG2_Ill_scalpel_13387:HG2_Ill_svaba_17686:HG2_PB_SVrefine2Falcon1plusDovetail_3063:HG2_PB_SVrefine2Falcon2Bionano_7063:HG2_PB_SVrefine2PB10Xhap12_10249:HG2_PB_SVrefine2PBcRplusDovetail_2892:HG3_10X_allpass_2754:HG3_Ill_GATKHCSBGrefine_9365:HG3_Ill_SVrefine2DISCOVARDovetail_10185:HG3_Ill_manta_3209:HG3_Ill_scalpel_13647:HG3_Ill_svaba_17848:HG3_PB_SVrefine2Falcon1Dovetail_8573:HG3_PB_SVrefine2PBcRDovetail_6681:HG4_10X_allpass_2648:HG4_Ill_GATKHCSBGrefine_9757:HG4_Ill_SVrefine2DISCOVARDovetail_10054:HG4_Ill_scalpel_13085:HG4_Ill_svaba_17716:HG4_PB_SVrefine2Falcon1Dovetail_8617:HG4_PB_pbsv_14144;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0585516;ClusterMaxSizeDiff=0.0585516;ClusterMaxEditDist=0.0585516;PBcalls=14;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=32582;DistForward=1340;DistMin=1340;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=13:74074912-74075249;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=985.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:62:1/1:0:31:0:23:1/1:0:15:0:23:1/1:0:33:0/1:2:16:.:.:.
chr13	75625199	HG2_CG_vcfBeta_8018	CATGTACATTAGCACTAGCCATCCATTTCTGGGCCACACAGATGCACACTGCCACTTCAATGTTTCACTGAAAGTAGGG	C	20	PASS	ClusterIDs=HG4_PB_pbsv_14151:HG4_PB_assemblyticsfalcon_7011:HG4_Ill_svaba_17722:HG4_Ill_scalpel_13093:HG4_Ill_manta_3337:HG4_Ill_Krunchall_19607:HG4_Ill_GATKHC_22635:HG4_Ill_GATKHCSBGrefine_9761:HG4_Ill_Cortex_953:HG4_Ill_250bpfermikitraw_18692:HG4_Ill_150bpfermikitraw_18000:HG4_CG_vcfBeta_9021:HG4_10X_allpass_2650:HG2_PB_assemblyticsPBcR_6863:HG2_Ill_svaba_17691:HG2_Ill_scalpel_13394:HG2_Ill_manta_3920:HG2_Ill_breakscan11_2019:HG2_Ill_SpiralSDKrefine_4443:HG2_Ill_Krunchall_19293:HG2_Ill_GATKHC_22673:HG2_Ill_GATKHCSBGrefine_9463:HG2_Ill_Cortex_2278:HG2_Ill_250bpfermikitraw_18945:HG2_Ill_150bpfermikitraw_17868:HG2_CG_vcfBeta_8018:HG2_PB_pbsv_14196;NumClusterSVs=27;ExactMatchIDs=HG2_CG_vcfBeta_8018:HG2_Ill_150bpfermikitraw_17868:HG2_Ill_250bpfermikitraw_18945:HG2_Ill_Cortex_2278:HG2_Ill_GATKHCSBGrefine_9463:HG2_Ill_GATKHC_22673:HG2_Ill_Krunchall_19293:HG2_Ill_SpiralSDKrefine_4443:HG2_Ill_breakscan11_2019:HG2_Ill_manta_3920:HG2_Ill_scalpel_13394:HG2_Ill_svaba_17691:HG2_PB_assemblyticsPBcR_6863:HG4_10X_allpass_2650:HG4_CG_vcfBeta_9021:HG4_Ill_150bpfermikitraw_18000:HG4_Ill_250bpfermikitraw_18692:HG4_Ill_Cortex_953:HG4_Ill_GATKHCSBGrefine_9761:HG4_Ill_GATKHC_22635:HG4_Ill_Krunchall_19607:HG4_Ill_manta_3337:HG4_Ill_scalpel_13093:HG4_Ill_svaba_17722:HG4_PB_assemblyticsfalcon_7011;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0127389;ClusterMaxSizeDiff=0.0127389;ClusterMaxEditDist=0.0254777;PBcalls=4;Illcalls=20;TenXcalls=1;CGcalls=2;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=2;HG2count=14;HG3count=0;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-78;DistBack=36333;DistForward=64526;DistMin=36333;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=13:75625198-75625278;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=986.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:24:./.:14:18:13:4:0|1:42:0:0:36:0/1:45:24:./.:.:.:.:.:.
chr13	76639273	HG3_PB_pbsv_13872	TAGGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAACCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_7026:HG3_PB_assemblyticsfalcon_7119:HG2_PB_assemblyticsPBcR_6872:HG4_Ill_Krunchall_19620:HG3_Ill_Krunchall_18943:HG2_Ill_Krunchall_19303:HG2_PB_PB10Xdip_9114:HG2_PB_PB10Xdip_9113:HG2_PB_assemblyticsfalcon_7138:HG2_PB_SVrefine2PB10Xhap12_10256:HG3_PB_HySA_21388:HG4_PB_HySA_20664:HG2_PB_HySA_25873:HG3_Ill_MetaSV_1415:HG2_Ill_tnscope_1572:HG4_PB_pbsv_14158:HG4_PB_SVrefine2Falcon1Dovetail_8623:HG4_Ill_scalpel_13103:HG4_Ill_manta_3341:HG4_Ill_SVrefine2DISCOVARDovetail_10060:HG4_Ill_GATKHCSBGrefine_9767:HG4_10X_allpass_2651:HG3_PB_pbsv_13872:HG3_PB_SVrefine2PBcRDovetail_6686:HG3_PB_SVrefine2Falcon1Dovetail_8578:HG3_Ill_scalpel_13668:HG3_Ill_manta_3211:HG3_Ill_SVrefine2DISCOVARDovetail_10196:HG3_Ill_GATKHCSBGrefine_9370:HG3_10X_allpass_2755:HG2_PB_pbsv_14199:HG2_PB_SVrefine2PBcRplusDovetail_2897:HG2_PB_SVrefine2PB10Xhap12_10255:HG2_PB_SVrefine2Falcon1plusDovetail_3068:HG2_Ill_manta_3923:HG2_Ill_breakscan11_2020:HG2_Ill_SVrefine2DISCOVARplusDovetail_3412:HG2_Ill_MetaSV_1298:HG2_Ill_GATKHCSBGrefine_9465:HG2_10X_allpass_2264:HG2_10X_SVrefine210Xhap12_9875;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9875:HG2_10X_allpass_2264:HG2_Ill_GATKHCSBGrefine_9465:HG2_Ill_MetaSV_1298:HG2_Ill_SVrefine2DISCOVARplusDovetail_3412:HG2_Ill_breakscan11_2020:HG2_Ill_manta_3923:HG2_PB_SVrefine2Falcon1plusDovetail_3068:HG2_PB_SVrefine2PB10Xhap12_10255:HG2_PB_SVrefine2PBcRplusDovetail_2897:HG2_PB_pbsv_14199:HG3_10X_allpass_2755:HG3_Ill_GATKHCSBGrefine_9370:HG3_Ill_SVrefine2DISCOVARDovetail_10196:HG3_Ill_manta_3211:HG3_Ill_scalpel_13668:HG3_PB_SVrefine2Falcon1Dovetail_8578:HG3_PB_SVrefine2PBcRDovetail_6686:HG3_PB_pbsv_13872:HG4_10X_allpass_2651:HG4_Ill_GATKHCSBGrefine_9767:HG4_Ill_SVrefine2DISCOVARDovetail_10060:HG4_Ill_manta_3341:HG4_Ill_scalpel_13103:HG4_PB_SVrefine2Falcon1Dovetail_8623:HG4_PB_pbsv_14158;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.0555556;PBcalls=19;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-469;DistForward=-294;DistMin=-469;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=13:76639274-76639609;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=987.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:41:0|1:29:0:2:49:1|0:0:37:35:0:0/1:25:16:0/1:27:11:.:.:.
chr13	79661067	HG2_PB_SVrefine2PBcRplusDovetail_2907	TATGACATCACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_7163:HG2_PB_assemblyticsPBcR_6899:HG4_PB_assemblyticsfalcon_7048:HG3_PB_assemblyticsfalcon_7143:HG4_Ill_Krunchall_19643:HG2_Ill_Krunchall_19325:HG2_Ill_breakscan11_2022:HG4_PB_HySA_20696:HG4_Ill_MetaSV_1383:HG2_Ill_tnscope_1573:HG4_PB_pbsv_14175:HG4_PB_SVrefine2PBcRDovetail_7094:HG4_PB_SVrefine2Falcon1Dovetail_8631:HG4_Ill_manta_3342:HG4_Ill_SVrefine2DISCOVARDovetail_10071:HG4_Ill_GATKHCSBGrefine_9777:HG4_10X_allpass_2652:HG3_PB_SVrefine2Falcon1Dovetail_8588:HG2_PB_pbsv_14216:HG2_PB_SVrefine2PBcRplusDovetail_2907:HG2_PB_SVrefine2PB10Xhap12_10268:HG2_PB_SVrefine2Falcon1plusDovetail_3077:HG2_Ill_manta_3925:HG2_Ill_MetaSV_1302:HG2_Ill_GATKHCSBGrefine_9473:HG2_10X_allpass_2265:HG2_10X_SVrefine210Xhap12_9882;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9882:HG2_10X_allpass_2265:HG2_Ill_GATKHCSBGrefine_9473:HG2_Ill_MetaSV_1302:HG2_Ill_manta_3925:HG2_PB_SVrefine2Falcon1plusDovetail_3077:HG2_PB_SVrefine2PB10Xhap12_10268:HG2_PB_SVrefine2PBcRplusDovetail_2907:HG2_PB_pbsv_14216:HG3_PB_SVrefine2Falcon1Dovetail_8588:HG4_10X_allpass_2652:HG4_Ill_GATKHCSBGrefine_9777:HG4_Ill_SVrefine2DISCOVARDovetail_10071:HG4_Ill_manta_3342:HG4_PB_SVrefine2Falcon1Dovetail_8631:HG4_PB_SVrefine2PBcRDovetail_7094:HG4_PB_pbsv_14175;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0819423;ClusterMaxSizeDiff=0.0819423;ClusterMaxEditDist=0.0819423;PBcalls=13;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=-341;DistForward=-322;DistMin=-341;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=13:79661068-79661416;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=988.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:29:0|1:42:0:1:28:0|1:35:0:0:17:0/1:30:27:0/1:32:12:.:.:.
chr13	79966245	HG2_Ill_GATKHC_22713	CATAATTATATAATTATATATTATACAATAATACATAATTATTATATAATTATATATTATACAATAATACATA	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_7173:HG2_PB_pbsv_14222:HG3_PB_pbsv_13888:HG2_PB_HySA_25914:HG4_Ill_svaba_17763:HG4_Ill_Krunchall_19653:HG4_Ill_GATKHC_22689:HG4_Ill_GATKHCSBGrefine_9780:HG4_Ill_250bpfermikitraw_18733:HG4_Ill_150bpfermikitraw_18043:HG3_PB_assemblyticsfalcon_7152:HG3_Ill_svaba_17886:HG3_Ill_manta_3213:HG3_Ill_Krunchall_18962:HG3_Ill_GATKHC_22596:HG3_Ill_GATKHCSBGrefine_9380:HG3_Ill_250bpfermikitraw_18449:HG3_Ill_150bpfermikitraw_17948:HG3_10X_allpass_2757:HG2_PB_assemblyticsPBcR_6907:HG2_Ill_svaba_17724:HG2_Ill_manta_3927:HG2_Ill_Krunchall_19334:HG2_Ill_GATKHC_22713:HG2_Ill_GATKHCSBGrefine_9477:HG2_Ill_250bpfermikitraw_18986:HG2_Ill_150bpfermikitraw_17902:HG4_PB_pbsv_14182:HG4_PB_assemblyticsfalcon_7057;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17902:HG2_Ill_250bpfermikitraw_18986:HG2_Ill_GATKHCSBGrefine_9477:HG2_Ill_GATKHC_22713:HG2_Ill_Krunchall_19334:HG2_Ill_manta_3927:HG2_Ill_svaba_17724:HG2_PB_assemblyticsPBcR_6907:HG3_10X_allpass_2757:HG3_Ill_150bpfermikitraw_17948:HG3_Ill_250bpfermikitraw_18449:HG3_Ill_GATKHCSBGrefine_9380:HG3_Ill_GATKHC_22596:HG3_Ill_Krunchall_18962:HG3_Ill_manta_3213:HG3_Ill_svaba_17886:HG3_PB_assemblyticsfalcon_7152:HG4_Ill_150bpfermikitraw_18043:HG4_Ill_250bpfermikitraw_18733:HG4_Ill_GATKHCSBGrefine_9780:HG4_Ill_GATKHC_22689:HG4_Ill_Krunchall_19653:HG4_Ill_svaba_17763;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0138889;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0413793;PBcalls=8;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-72;DistBack=-92;DistForward=-70;DistMin=-92;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=317;REFWIDENED=13:79966098-79966486;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=989.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:58:1/1:6:25:2:24:1/1:0:12:0:7:1/1:0:52:./.:.:.:.:.:.
chr13	79993226	HG4_PB_SVrefine2PBcRDovetail_7096	CCAGGGTTTTTGTTTGTTTTGCATTTTAAGGAGCTAGAAAGGTAGAGGAGGCTAAACGCCATCTACATCT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_17903:HG3_PB_HySA_21426:HG2_PB_pbsv_14223:HG4_PB_pbsv_14183:HG3_PB_pbsv_13889:HG2_PB_HySA_25915:HG4_PB_SVrefine2PBcRDovetail_7096:HG4_PB_SVrefine2Falcon1Dovetail_8634:HG4_Ill_svaba_17764:HG4_Ill_SVrefine2DISCOVARDovetail_10074:HG4_Ill_250bpfermikitraw_18734:HG4_Ill_150bpfermikitraw_18044:HG3_PB_SVrefine2PBcRDovetail_6696:HG3_PB_SVrefine2Falcon1Dovetail_8591:HG3_Ill_svaba_17887:HG3_Ill_SVrefine2DISCOVARDovetail_10211:HG3_Ill_GATKHCSBGrefine_9381:HG3_Ill_250bpfermikitraw_18450:HG3_Ill_150bpfermikitraw_17949:HG2_PB_SVrefine2PBcRplusDovetail_2909:HG2_PB_SVrefine2PB10Xhap12_10271:HG2_PB_SVrefine2Falcon2Bionano_7075:HG2_PB_SVrefine2Falcon1plusDovetail_3080:HG2_Ill_svaba_17725:HG2_Ill_SpiralSDKrefine_4465:HG2_Ill_SVrefine2DISCOVARplusDovetail_3423:HG2_Ill_250bpfermikitraw_18987;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17903:HG4_PB_SVrefine2PBcRDovetail_7096:HG4_PB_SVrefine2Falcon1Dovetail_8634:HG4_Ill_svaba_17764:HG4_Ill_SVrefine2DISCOVARDovetail_10074:HG4_Ill_250bpfermikitraw_18734:HG4_Ill_150bpfermikitraw_18044:HG3_PB_SVrefine2PBcRDovetail_6696:HG3_PB_SVrefine2Falcon1Dovetail_8591:HG3_Ill_svaba_17887:HG3_Ill_SVrefine2DISCOVARDovetail_10211:HG3_Ill_GATKHCSBGrefine_9381:HG3_Ill_250bpfermikitraw_18450:HG3_Ill_150bpfermikitraw_17949:HG2_PB_SVrefine2PBcRplusDovetail_2909:HG2_PB_SVrefine2PB10Xhap12_10271:HG2_PB_SVrefine2Falcon2Bionano_7075:HG2_PB_SVrefine2Falcon1plusDovetail_3080:HG2_Ill_svaba_17725:HG2_Ill_SpiralSDKrefine_4465:HG2_Ill_SVrefine2DISCOVARplusDovetail_3423:HG2_Ill_250bpfermikitraw_18987;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0431655;ClusterMaxSizeDiff=0.0431655;ClusterMaxEditDist=0.0437956;PBcalls=13;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-69;DistBack=19678;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=132;REFWIDENED=13:79993227-79993427;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=990.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:61:1/1:1:30:1:23:./.:0:2:0:1:1/1:0:24:./.:.:.:.:.:.
chr13	80081392	HG4_Ill_scalpel_13122	TTCTGATTGAGTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_7059:HG2_PB_PB10Xdip_9147:HG2_PB_SVrefine2PB10Xhap12_10273:HG4_PB_HySA_20705:HG2_PB_assemblyticsPBcR_6910:HG2_PB_assemblyticsfalcon_7175:HG2_PB_pbsv_14224:HG4_PB_pbsv_14184:HG4_10X_allpass_2653:HG2_Ill_breakscan11_2023:HG4_PB_SVrefine2PBcRDovetail_7097:HG4_Ill_scalpel_13122:HG4_Ill_manta_3344:HG4_Ill_GATKHCSBGrefine_9781:HG2_PB_SVrefine2PBcRplusDovetail_2910:HG2_PB_SVrefine2PB10Xhap12_10272:HG2_PB_SVrefine2Falcon2Bionano_7076:HG2_PB_SVrefine2Falcon1plusDovetail_3081:HG2_Ill_scalpel_13419:HG2_Ill_manta_3928:HG2_Ill_GATKHCSBGrefine_9478:HG2_10X_SVrefine210Xhap12_9883:HG2_Ill_tnscope_1574:HG2_Ill_MetaSV_1304:HG4_PB_SVrefine2Falcon1Dovetail_8635;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9883:HG2_Ill_GATKHCSBGrefine_9478:HG2_Ill_manta_3928:HG2_Ill_scalpel_13419:HG2_PB_SVrefine2Falcon1plusDovetail_3081:HG2_PB_SVrefine2Falcon2Bionano_7076:HG2_PB_SVrefine2PB10Xhap12_10272:HG2_PB_SVrefine2PBcRplusDovetail_2910:HG4_Ill_GATKHCSBGrefine_9781:HG4_Ill_manta_3344:HG4_Ill_scalpel_13122:HG4_PB_SVrefine2PBcRDovetail_7097;NumExactMatchSVs=12;ClusterMaxShiftDist=0.147783;ClusterMaxSizeDiff=0.147783;ClusterMaxEditDist=0.160393;PBcalls=14;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=-317;DistForward=26776;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=13:80081393-80081723;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=991.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:36:0|1:27:4:0:22:0|1:33:0:0:11:0/1:24:25:0/1:25:6:.:.:.
chr13	80531633	HG4_PB_SVrefine2PBcRDovetail_7098	CTCTGTAGGTGAAGGAGAGTGAGTAGTTCCCAGGAATTTCAGACATCTGAATAAATTAGAATTTTTAAAAATCTATTGACTCAGGGGTGGCTGGCAAGATGACTGAATAGGAACAGCTCCAGTCTGCAGCTCCCAGTGAGATCAATGCAGAAAGTGGGTGATTTCTGCATTTCCAACTGAGGTACCTGGATCATCTCATTGGGACTGGTTAGACAGTGGGTGCAGCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9885:HG3_PB_pbsv_13890:HG2_PB_pbsv_14226:HG4_PB_pbsv_14186:HG4_PB_SVrefine2PBcRDovetail_7098:HG4_PB_SVrefine2Falcon1Dovetail_8636:HG4_PB_HySA_20708:HG4_Ill_SVrefine2DISCOVARDovetail_10076:HG3_PB_SVrefine2PBcRDovetail_6697:HG3_PB_SVrefine2Falcon1Dovetail_8592:HG3_Ill_SVrefine2DISCOVARDovetail_10212:HG2_PB_SVrefine2PBcRplusDovetail_2911:HG2_PB_SVrefine2PB10Xhap12_10274:HG2_PB_SVrefine2Falcon2Bionano_7078:HG2_PB_SVrefine2Falcon1plusDovetail_3083:HG2_Ill_SVrefine2DISCOVARplusDovetail_3426:HG2_10X_allpass_2266;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9885:HG4_PB_SVrefine2PBcRDovetail_7098:HG4_PB_SVrefine2Falcon1Dovetail_8636:HG4_PB_HySA_20708:HG4_Ill_SVrefine2DISCOVARDovetail_10076:HG3_PB_SVrefine2PBcRDovetail_6697:HG3_PB_SVrefine2Falcon1Dovetail_8592:HG3_Ill_SVrefine2DISCOVARDovetail_10212:HG2_PB_SVrefine2PBcRplusDovetail_2911:HG2_PB_SVrefine2PB10Xhap12_10274:HG2_PB_SVrefine2Falcon2Bionano_7078:HG2_PB_SVrefine2Falcon1plusDovetail_3083:HG2_Ill_SVrefine2DISCOVARplusDovetail_3426:HG2_10X_allpass_2266;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0133038;ClusterMaxSizeDiff=0.0133038;ClusterMaxEditDist=0.0222717;PBcalls=12;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-226;DistBack=117330;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=225;REFWIDENED=13:80531634-80532084;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=992.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:2:27:0:7:./.:0:2:0:2:./.:0:4:./.:.:.:.:.:.
chr13	81747236	HG3_Ill_SVrefine2DISCOVARDovetail_10218	TTCAGCTCACCAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2024:HG2_PB_assemblyticsPBcR_6928:HG4_PB_assemblyticsfalcon_7078:HG3_PB_assemblyticsfalcon_7171:HG2_PB_assemblyticsfalcon_7194:HG3_Ill_Krunchall_18974:HG2_Ill_Krunchall_19347:HG3_PB_pbsv_13897:HG2_PB_pbsv_14234:HG4_PB_HySA_20723:HG3_PB_HySA_21442:HG4_PB_pbsv_14196:HG4_PB_SVrefine2PBcRDovetail_7103:HG4_PB_SVrefine2Falcon1Dovetail_8643:HG4_Ill_svaba_17779:HG4_Ill_scalpel_13133:HG4_Ill_manta_3347:HG4_Ill_GATKHCSBGrefine_9787:HG4_10X_allpass_2655:HG3_PB_SVrefine2PBcRDovetail_6702:HG3_PB_SVrefine2Falcon1Dovetail_8599:HG3_Ill_svaba_17900:HG3_Ill_scalpel_13696:HG3_Ill_manta_3214:HG3_Ill_SVrefine2DISCOVARDovetail_10218:HG3_Ill_GATKHCSBGrefine_9384:HG3_10X_allpass_2758:HG2_PB_SVrefine2PBcRplusDovetail_2916:HG2_PB_SVrefine2PB10Xhap12_10283:HG2_PB_SVrefine2Falcon2Bionano_7083:HG2_PB_SVrefine2Falcon1plusDovetail_3090:HG2_Ill_svaba_17738:HG2_Ill_scalpel_13436:HG2_Ill_manta_3932:HG2_Ill_SpiralSDKrefine_4475:HG2_Ill_SVrefine2DISCOVARplusDovetail_3430:HG2_Ill_MetaSV_1306:HG2_Ill_GATKHCSBGrefine_9484:HG2_10X_allpass_2267:HG2_10X_SVrefine210Xhap12_9893:HG3_Ill_MetaSV_1420:HG2_Ill_tnscope_1575;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9893:HG2_10X_allpass_2267:HG2_Ill_GATKHCSBGrefine_9484:HG2_Ill_MetaSV_1306:HG2_Ill_SVrefine2DISCOVARplusDovetail_3430:HG2_Ill_SpiralSDKrefine_4475:HG2_Ill_manta_3932:HG2_Ill_scalpel_13436:HG2_Ill_svaba_17738:HG2_PB_SVrefine2Falcon1plusDovetail_3090:HG2_PB_SVrefine2Falcon2Bionano_7083:HG2_PB_SVrefine2PB10Xhap12_10283:HG2_PB_SVrefine2PBcRplusDovetail_2916:HG3_10X_allpass_2758:HG3_Ill_GATKHCSBGrefine_9384:HG3_Ill_SVrefine2DISCOVARDovetail_10218:HG3_Ill_manta_3214:HG3_Ill_scalpel_13696:HG3_Ill_svaba_17900:HG3_PB_SVrefine2Falcon1Dovetail_8599:HG3_PB_SVrefine2PBcRDovetail_6702:HG4_10X_allpass_2655:HG4_Ill_GATKHCSBGrefine_9787:HG4_Ill_manta_3347:HG4_Ill_scalpel_13133:HG4_Ill_svaba_17779:HG4_PB_SVrefine2Falcon1Dovetail_8643:HG4_PB_SVrefine2PBcRDovetail_7103;NumExactMatchSVs=28;ClusterMaxShiftDist=0.115806;ClusterMaxSizeDiff=0.115806;ClusterMaxEditDist=0.115806;PBcalls=17;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-122;DistForward=-329;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=13:81747237-81747583;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=993.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:28:0|1:28:0:1:30:1|0:0:11:39:0:0/1:23:23:0/1:26:6:.:.:.
chr13	82889194	HG2_Ill_manta_3937	TAAAGATGGTATCATTGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9901:HG2_PB_SVrefine2PB10Xhap12_10287:HG2_PB_PB10Xdip_9181:HG3_PB_pbsv_13902:HG3_Ill_Krunchall_18980:HG2_PB_assemblyticsfalcon_7205:HG3_Ill_Spiral_14802:HG2_Ill_Spiral_947:HG2_PB_pbsv_14241:HG3_Ill_MetaSV_1421:HG2_Ill_tnscope_1576:HG4_PB_assemblyticsfalcon_7088:HG4_PB_SVrefine2Falcon1Dovetail_8648:HG3_Ill_manta_3217:HG3_Ill_GATKHCSBGrefine_9387:HG3_10X_allpass_2759:HG2_PB_SVrefine2Falcon1plusDovetail_3093:HG2_Ill_manta_3937:HG2_Ill_breakscan11_2026:HG2_Ill_MetaSV_1307:HG2_Ill_GATKHCSBGrefine_9489:HG2_10X_allpass_2268;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9901:HG4_PB_assemblyticsfalcon_7088:HG4_PB_SVrefine2Falcon1Dovetail_8648:HG3_Ill_manta_3217:HG3_Ill_GATKHCSBGrefine_9387:HG3_10X_allpass_2759:HG2_PB_SVrefine2Falcon1plusDovetail_3093:HG2_Ill_manta_3937:HG2_Ill_breakscan11_2026:HG2_Ill_MetaSV_1307:HG2_Ill_GATKHCSBGrefine_9489:HG2_10X_allpass_2268;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0980683;ClusterMaxSizeDiff=0.0980683;ClusterMaxEditDist=0.0980683;PBcalls=8;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-343;DistBack=9990;DistForward=-324;DistMin=-324;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=13:82889195-82889555;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=994.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:21:0|1:48:1:1:21:1|0:0:27:39:0:0/1:14:20:0/1:19:7:.:.:.
chr13	83165934	HG2_Ill_SpiralSDKrefine_4485	ATGGTAAGCGAGAGACCCACAACAGTTGACATTTCCACCATGAATTTCTACAATCCTAGACATGGGAGAGCACTTTGACCCTTGCAGGCCCTGAACCTTATATAAGGAGCTGCCAGGAGAATCTGTGATGACGTTGCCCAAGGAAGAAAGCTTGCCCTGGGTTCCATGTATTCCCTGAGACCTAAACAGCTTCAGCAAGGTGCCTTTTTAGAATGTCACATCCAACATGCTGTACACTGTACTGGAGTCCTGTGGTGCTGGGACTGAGGTGCTGAGAAACACAAGCTGCTAGACCTGGGGTTCAGGTGTGAGTGACCATGGCTACTGCATCTGGGTGTGAGAGCCACGAGGACTGAGGTGTGAATGGTGCATGCACTCTGTACTCTTAGCCTAGGCTGCCATCACTGAAGGTGGCATTGCTTGCCCAAGTGGCAGACCCCAGCCATGCTGCTGCCTCTGACCCAAGAACACTTCCAGTGGCCTGAGAATCATCCCACCTCCACCTCTCACAGCCAGCACCCGTACACACCATCAGGGGACCTAAAGACATGTCAGTCTGTCCTGGTTTGACACTCACCCCCAGAGTAAGTTTGACACTTACCCCTGTTGTGGGTAAGTGAGAGACCCACAACAGTTGAGATTTCCACCATGAATTCCTACAATCCTAGACCCTAGTGGGAGCCAGGTGATTGCCCAGCCAAGTCCACCACCACTGATACCTGAACTTTACTCTCAGGAGTCTGAGACTGAGCCTACCAACTCAGCCACTATTACCATAGAAGGCATCTAGCTGCATATACCACCTGCAGGCCTGAAGACTTGCCTGCATAGCCATTCACAGACACTGCCAATACCTGTGTACACGGCTTGGAACCCAAAGGGCCTTTATGCCACAGCCACTGCACGCCATCTGCCCACGGTCCTGAGAAACGTTCCATCTGCCTGGCCCACTGCTGCAATTATCAGCATCGGTGTAAGCCACCTGAAGGTCCAAGGATTGGCCTGCCTGGCCCCACTACTGGTGATGGTGTGTGCCACCCTGGGGCAGAAAGACAGCCATGATCAGCCCACTAGTCCCACCACTGTGGCCTGAAGACTAGCCTACCTGGGTGTCCCACTTCCCAGAAAACCTGCACCACAGCTTCCACTAATAACTGAACTCTAACCATTGAGGAAATCATAGATACCACTAATGCCACTGACAGCCAAAGAAGTTATCCAGAGATTAAACTATTGCATGCATTCAGAATCAAACTCAAAGTACCCTATGGAACCAACACCATAGATTAATAATAAGGAAACATTTTTCACTTAGGAAAGCAAAATTCAGAAAAGGGGAGAAAGCAAGTGTTACACTGGATACACACATATCACCATAAGGACAAAGGAAACATAAAAATCAAAGAATTATGGCAACTCCAAGGAACTCAGTAATTCTCCAGCAACAGATTCTAATCAAAACAAACTCACAAAATGGAGGGAAAATCATTCAAATCATTAATTCTAAAGAAACTCAGTGAAATATAAAAGAATTCTGAAAAAGTATGCAAACAAATTTGAAAAATAATTCAGAATATGAATGAGAAATTTACCAAAGATACAGATACCATAAAAAAGAAGGAAACAAAAATGCTGACTGCGAAAATTCCTTGAGTAAAATATAAAATACATTTGAAAACCTTAACAATAGACTAGGTCAATTACAAGAAATAATCTCAGAACTTGACAGTTGTTTTGAAATAACCCAGTAAGATACAAATTAAACAAAATAATAAAAAGAAAGAGAAATGAAATAAATAATGCCACTGTAGGAGAGCACCAAACCACAATAACAAACAATAAAAGAAAAGAGAAAGAAAAAGAAAGAAAGAATGTGACAAAAAAACCCAGAAAATAATGAACAATATCAAAGGAACAAAAGTTTCTGTGTAAGTAATAACTTTCAACATAAATGGATTAAATTCTCTACTTAAAAGGTATAAATGTTCTGAGTAGATGAGAAACCATAATCCAACCATATGCTCTCTACAAGAAATGAACTTTACTTGTGAAAACACATACAGACCGAAAGTAAAGGAATGAAACAAATATTTTACACAAAAACTAAAAGTGAGTGGGAGTGGCTATATTTACATCAGATAATACAGACTTTAAGCCAAAAACTGTAAAATAAAAAAGACAAAGAACACCATTATATAATTAAAAAGGAATTCAGCAAGATAATATAACAATTCTAAGTATGCATGCATCCAACATGAAGCACCCAGATTCATAAAGCAAATATTACTAGATATAAAGAGAGATAGACTCCAGTACGGTAATAGTGGGGGACTTCAACACCTCACTCTCAGCATTAGACAGATCACGTAGACAGAATATCAATGAAGAAACATTGGATTTAAACTTGACTTTAGACCAATTGATCCAAGAGATATTAACTAAACATTTTATCCAACAACTACAGATACACATTCTTCTCTTCAGTACGTGGAACATTCTCCAGAATAGATTGTATGTTAGGCCAAAAAACAATTTTTGAGCACTTTTTAAACATTGATATTATATTAACCTTCTCAGACCAAAATTGAATAAAACTAAAAATAAACATAAAAACCATTATCAAGAGGAACTTTGGAAACTTTCCAAAACATAGAAATTAAATCAGAAGCTTCTGAATAACCACTAAGTCAATGGAGAAATTAAAATGGAACTCAAAACTTTTCTTGAAACAAATGAAAATGGAAACACAACTTCAAAACCTGTGAGATGCAGCAAAAGCAGTACTAAGAGGGAAATTTGTAGCAATAAATGCTACATGAAAAACACAGAAAGATTTTGAATAAACAATCTAACAATGTACCTCAGTGAACTAGAAAAGCAAAAACAAACCAATCCAAAATTAACAGAAAAAAAGAAATAATAAAGATCACAGCAGAACTAAATGAAATAGAGATCTAAAAAACAGTACAAATAACCAATGAAATTAAAAGTTGCTTCTTTGAAAAGATAAAATTAATAAACTGCTAGCTTGACTAACCAAAAATTCACAACAAAATATTAGCAAACAGAATTCAAGAGCAAATATAAAAGTTAATGGATCATGCATGATCAAATGACATTTCCTCAAGGGATTCAAGGATGTTTTAACATATACAAATCCATACATGTAATATACCACTTTAACAGAATGAAAAATAAAAACCTTACAGTCATCTCAATAGACACAGAAAAGGCATTTGATAAAATTCAAAATCCCTTCATATGAAAACTCTCAACAAACTAGATATAGAAGAAATATATCTCAAAATAATAAACACCATTTATGACAAACCAACAGCTAACATCATACTAAATAGGGAAAAATTACAAGCTTCTTCTCTCAGAACTGGAACAAGACAAGGATACCTACTTTCACCATTCCTAATCAACATACTACTGGAAGTCTTAGCTAGAGCAATTAGGCCAGAAAAGTAACGAAAGAAATTTAAATTAGAAAAGAGGAAGTCAAATTGTTTCTTTTTTTTGGAGGTGATATGATCTTATATTTAGAAAAAACCAAAGACGTCACCTAAAACTGTTAAAGCTGATAAGCAAATTCAGTAAATGTGTAGTGTACAAAATTATCATACAAATAACAGTAGTGTTTTTATGCATCGATATTGAAATAGCAGAAAAATAAGTCAAGAAGAAAATGCTGTTTAAAATAGCTACAAAATAAAACAAAATATTTATGAATAAAGTTAACCAAGTACGTGAAGATCTACAGAAATATGAATACTACAGTGCATTGATGAAGTAAACTGAAGAGAAGAAAAATGGAAAGATGTCTCATGCTCACAAATAGGAAAGATTAATATCAGTAAAATGACTACACTGCCAAAAGCCGTCTACAGATTTGATGCAATCCTGATCAAAACACCAATGTTATTTTTCACAGACACAGAAAAAAAATACTAAAATTCGTATGGAAGCAAAAAAGAGCCATAATAGCCAAAGCAATTCTGAGCAAAAATAAGAAAGCTGGACGCTTCACATTACCCGATGTCAAAATATATTACAAGGCTATAGAAACCAAAACAGAATGGTATTGGTATACAAACAGACACATAGATTAATGGAACAGAATAGAGCACACAGCAATAAATCTACATATTTATCACCAACTGATTTTTGACAAAAGCACCAAGAAAATACACTGGGGGAATCGACACCTTTTTCAGTAACGGTGCCAGGAAAATTGGATATTCACATGCAGAAGAATGAAACTGAATCTCTATTTCTCATCATATACAAAAAGCAACTCAAGATGAATTAAGAGTTAAACAGGAGACCCCAAACTATCAAATTACTAAAAGGAAACATAGGAAAAACACTCCAAGACATTGGTTTAGGTTAAAGGTTTTATGGGAAAGTCCTTAAAAGCAGACACCAAAAATAAAACATATTGGACTATATTAAACTAAAAATTATCTGTACAGCAATAAACAAAATAAAACAAGAAAGAAAAACAGTAAAGAGTCAACCTTTTGATATGAATAGACATTTCTCAAAAGAAGACATACAAATGGCCAACAGGTATGTGAAAATATAATCAACATCACTAAGCAACGAGGGAATGCATCAAAACCAAAATGAAATTTTACCTTACCCCAGTTAGAATGGCTATTAATAAAAGACAAAAAATAACAGATGCTAGTGAGGATATGGAGAAAAGGAAACCCTTATTCACTGTTGGCAGGATTGTATGTAGTATAACCAATATAAAAAATAACATGACATTTTCTTTAAAAAACTAAAAATAGAATTGCCATATGATCCAGCAATCCCACTACTGGGTATCCATGCAAAGGAAAATAAATTAGTATTTCAGATGGATACCTGCACTCACATGTTTGTCACAGCACTATTCATAACAGCAAAAATATAGGAATTAACCTAAGTGACCAACAATGAACAAATGGACAAAGAAAATGTGGTATGTGTACAAAATAAAATATCATTTAGTCATAAAAAGAATAAAATTATGCCACTTGAAGCAACATAGCTGGAACTGGAGATCATTATGTTAAGTGAGATAGCCTATACACAAAAAAACAAATACCACATACCCTTACTCTTATGTGAGAGCTAAAAATCTTTATGACATGAAAATAGAGATAGAATGATAGACACCAGAGTCTGGGAAGGGTGTGAGGGTGAGAGGGGGAAATAAATGAAATTTGGTGAATGGGTACACATTGATAGTTAGATAAAAGAAATAACTTGTAATGTTCTATAGTAGACTAGGGTGACCATAGTTGGTAACACTGTATTTTATATTTCTAAGTAGCTGGAAGAGAGGACTTAAAAATGTTACCAACCCATGGAAGTGATACTTAGAAATGGTAAATATTTAAGGTGATGCATACGCCAAATACCCTAAGTTGATCATTCCACATTCTATGCTCACATGTAACCCCCAAATATATAAAATATTATGCATAAAGGAAAAATAAATACATTAAGAGATAATAAATTCAACTAAAGTGGAGATTTTATAGGTATGAAAATGTAGTTAAACATTTGAAAAATTATCAATCAGTATAATTAATTACATGAGTTGAATTAGAAAAATTTCTTGCTTATCCCAATAACGTGCCAACAAACATTTGATAAAAGGCATAGTAAATAGAAAATGAAATGGAACTCTCTTAATTTGATTCATAAGAGTACTTTTGAATAAATATCATGTGAAAAATTATACATGTCTCTGTAAGACAGTTTTGGAAGTTATGACTTGACAAGAAAGCCAAGAAATTTTTAAAAAGAAAGAATACAGAGAAATTAAATAAATAAAACTGTTTTTCTTAGATATATGATTGCAAATGTAGAAATTTCTCCCCTAACCTTCCCAGATTAACTGCTACAACAAATAAATGGAGTTAGTGAGTTGTCTATATAAAGAATTAATAGAGACATTTTTTAAGAAAACTTTTTTTTTCCTAAATGAACGGTATGTAAGTAGAGTGAGTTAGTGAAAAAGCACCAGAGAAAGAGAAGGTTAAGGAGAACCTGGTTTAATATGAATAGGCCACCTGTGTTTGCTAATTGGTATTTATCATAGTTAGGATCCTACCCTCCCACAGAGAATGAAAATAGGGACTCTATCCTTCATGATAATTACATTTCAAAGAGATGGCTCCTGGGTCTTTGAGAAAGACATTCCTGAGCAAAACTGGCAAGAGGCTGGGGGAAGATTTACATCCCCAAGGGAAAGAGAAAAAATTTACAAT	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_19357:HG4_PB_pbsv_14208:HG4_10X_allpass_2658:HG2_PB_HySA_25966:HG2_10X_allpass_2269:HG3_PB_assemblyticsfalcon_7182:HG2_Ill_MetaSV_1308:HG2_Ill_tnscope_1577:HG2_PB_assemblyticsfalcon_7207:HG4_PB_SVrefine2PBcRDovetail_7108:HG4_Ill_MetaSV_1393:HG3_PB_SVrefine2Falcon1Dovetail_8605:HG2_PB_pbsv_14244:HG2_PB_SVrefine2PBcRplusDovetail_2921:HG2_PB_SVrefine2PB10Xhap12_10290:HG2_PB_SVrefine2Falcon1plusDovetail_3096:HG2_Ill_breakscan11_2028:HG2_Ill_SpiralSDKrefine_4485:HG2_Ill_SVrefine2DISCOVARplusDovetail_3438:HG2_10X_SVrefine210Xhap12_9903;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9903:HG2_Ill_SVrefine2DISCOVARplusDovetail_3438:HG2_Ill_SpiralSDKrefine_4485:HG2_Ill_breakscan11_2028:HG2_PB_SVrefine2Falcon1plusDovetail_3096:HG2_PB_SVrefine2PB10Xhap12_10290:HG2_PB_SVrefine2PBcRplusDovetail_2921:HG2_PB_pbsv_14244:HG3_PB_SVrefine2Falcon1Dovetail_8605:HG4_Ill_MetaSV_1393:HG4_PB_SVrefine2PBcRDovetail_7108;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0352803;ClusterMaxSizeDiff=0.0352803;ClusterMaxEditDist=0.0352803;PBcalls=10;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-6271;DistBack=28870;DistForward=-6270;DistMin=-6270;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=13:83165935-83172207;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=995.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:82:51:0|1:59:1:3:19:0|1:39:0:0:26:0/1:60:13:0/1:411:224:6553:.:.
chr13	83580312	HG2_PB_SVrefine2PB10Xhap12_10295	TGGTAAATGACTATGACCGAAATATGCCAACCAAAATTCCACAAATTTCATGACCCAAGGCAAAGTTTATTTTCTCATATTATCCAAACTGCCAGAGAGTTTACAAAGTCCAGAGCTAAGTGTTATTTTTCTAACTAGTTAATCTTGGATCAAGTGGTCATAGTTTTTTTTTTAAATAATAACCTTTAGGATGGATTTG	T	20	PASS	ClusterIDs=HG4_PB_HySA_20747:HG4_PB_assemblyticsfalcon_7094:HG4_PB_SVrefine2Falcon1Dovetail_8653:HG4_10X_allpass_2660:HG4_PB_pbsv_14213:HG2_PB_pbsv_14250:HG4_PB_SVrefine2PBcRDovetail_7112:HG4_Ill_SVrefine2DISCOVARDovetail_10087:HG2_PB_SVrefine2PB10Xhap12_10295:HG2_PB_SVrefine2Falcon1plusDovetail_3101;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3101:HG2_PB_SVrefine2PB10Xhap12_10295:HG4_Ill_SVrefine2DISCOVARDovetail_10087:HG4_PB_SVrefine2PBcRDovetail_7112;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0352645;ClusterMaxSizeDiff=0.0352645;ClusterMaxEditDist=0.0717949;PBcalls=8;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-198;DistBack=89797;DistForward=-197;DistMin=-197;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=203;REFWIDENED=13:83580313-83580713;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.995;PctRecOverlap=0.185;SizeDiff=-1;StartDistance=-162;EndDistance=-163;GTMatch=0;TruScore=72;MatchId=996.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:32:0|1:38:2:1:29:./.:21:1:0:1:0/1:24:4:./.:.:.:.:.:.
chr13	83949281	HG2_Ill_SVrefine2DISCOVARplusDovetail_3442	TAAGATTATTTTCCGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9906:HG2_PB_HySA_25979:HG4_PB_pbsv_14214:HG2_Ill_Krunchall_19362:HG4_PB_assemblyticsfalcon_7096:HG3_PB_assemblyticsfalcon_7188:HG2_PB_assemblyticsfalcon_7215:HG2_PB_assemblyticsPBcR_6946:HG3_PB_pbsv_13911:HG4_PB_HySA_20749:HG4_Ill_MetaSV_1397:HG3_Ill_MetaSV_1426:HG2_Ill_tnscope_1579:HG2_Ill_MetaSV_1311:HG4_PB_SVrefine2PBcRDovetail_7113:HG4_PB_SVrefine2Falcon1Dovetail_8654:HG4_Ill_scalpel_13149:HG4_Ill_manta_3353:HG4_Ill_SVrefine2DISCOVARDovetail_10088:HG4_Ill_GATKHCSBGrefine_9796:HG3_PB_SVrefine2PBcRDovetail_6708:HG3_PB_SVrefine2Falcon1Dovetail_8608:HG3_PB_HySA_21467:HG3_Ill_scalpel_13706:HG3_Ill_manta_3220:HG3_Ill_SVrefine2DISCOVARDovetail_10223:HG3_Ill_GATKHCSBGrefine_9393:HG3_10X_allpass_2764:HG2_PB_pbsv_14251:HG2_PB_SVrefine2PBcRplusDovetail_2927:HG2_PB_SVrefine2PB10Xhap12_10296:HG2_PB_SVrefine2Falcon2Bionano_7089:HG2_PB_SVrefine2Falcon1plusDovetail_3102:HG2_Ill_scalpel_13451:HG2_Ill_manta_3941:HG2_Ill_SVrefine2DISCOVARplusDovetail_3442:HG2_Ill_GATKHCSBGrefine_9501:HG2_10X_allpass_2271;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9906:HG4_PB_SVrefine2PBcRDovetail_7113:HG4_PB_SVrefine2Falcon1Dovetail_8654:HG4_Ill_scalpel_13149:HG4_Ill_manta_3353:HG4_Ill_SVrefine2DISCOVARDovetail_10088:HG4_Ill_GATKHCSBGrefine_9796:HG3_PB_SVrefine2PBcRDovetail_6708:HG3_PB_SVrefine2Falcon1Dovetail_8608:HG3_PB_HySA_21467:HG3_Ill_scalpel_13706:HG3_Ill_manta_3220:HG3_Ill_SVrefine2DISCOVARDovetail_10223:HG3_Ill_GATKHCSBGrefine_9393:HG3_10X_allpass_2764:HG2_PB_pbsv_14251:HG2_PB_SVrefine2PBcRplusDovetail_2927:HG2_PB_SVrefine2PB10Xhap12_10296:HG2_PB_SVrefine2Falcon2Bionano_7089:HG2_PB_SVrefine2Falcon1plusDovetail_3102:HG2_Ill_scalpel_13451:HG2_Ill_manta_3941:HG2_Ill_SVrefine2DISCOVARplusDovetail_3442:HG2_Ill_GATKHCSBGrefine_9501:HG2_10X_allpass_2271;NumExactMatchSVs=25;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.105263;PBcalls=18;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-223;DistBack=615;DistForward=-210;DistMin=-210;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=13:83949282-83949516;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=997.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:63:1/1:1:26:1:7:1/1:0:14:0:13:1/1:0:31:./.:.:.:.:.:.
chr13	83954717	HG2_Ill_GATKHCSBGrefine_9502	CTTCTGTCCTTCCTTCCTTCTCTTCCCCCTCCCTCCCCCTTCCTTCCTTCT	C	20	PASS	ClusterIDs=HG2_PB_HySA_25980:HG4_Ill_150bpfermikitraw_18072:HG2_PB_HySA_25981:HG4_PB_pbsv_14215:HG4_Ill_svaba_17797:HG4_Ill_scalpel_13150:HG4_Ill_GATKHC_22727:HG4_Ill_GATKHCSBGrefine_9797:HG3_PB_pbsv_13912:HG3_Ill_svaba_17916:HG3_Ill_scalpel_13707:HG3_Ill_GATKHC_22634:HG3_Ill_GATKHCSBGrefine_9394:HG2_PB_pbsv_14252:HG2_PB_assemblyticsfalcon_7216:HG2_PB_assemblyticsPBcR_6947:HG2_Ill_svaba_17756:HG2_Ill_SpiralSDKrefine_4492:HG2_Ill_GATKHC_22753:HG2_Ill_GATKHCSBGrefine_9502:HG2_Ill_150bpfermikitraw_17937:HG3_PB_assemblyticsfalcon_7189:HG4_PB_assemblyticsfalcon_7097:HG4_PB_HySA_20750;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_17937:HG2_Ill_GATKHCSBGrefine_9502:HG2_Ill_GATKHC_22753:HG2_Ill_SpiralSDKrefine_4492:HG2_Ill_svaba_17756:HG2_PB_assemblyticsPBcR_6947:HG2_PB_assemblyticsfalcon_7216:HG2_PB_pbsv_14252:HG3_Ill_GATKHCSBGrefine_9394:HG3_Ill_GATKHC_22634:HG3_Ill_scalpel_13707:HG3_Ill_svaba_17916:HG3_PB_pbsv_13912:HG4_Ill_GATKHCSBGrefine_9797:HG4_Ill_GATKHC_22727:HG4_Ill_scalpel_13150:HG4_Ill_svaba_17797:HG4_PB_pbsv_14215;NumExactMatchSVs=18;ClusterMaxShiftDist=0.210526;ClusterMaxSizeDiff=0.210526;ClusterMaxEditDist=0.22807;PBcalls=10;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=5421;DistForward=96595;DistMin=5421;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=13:83954716-83954771;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=998.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:55:1/1:4:46:1:7:1/1:0:21:0:15:./.:0:7:./.:.:.:.:.:.
chr13	85270032	HG4_Ill_GATKHC_22741	GTATATATATATATATATATATATATATATATATATATATATATATATATATA	G	20	PASS	ClusterIDs=HG3_PB_HySA_21481:HG3_PB_pbsv_13917:HG2_PB_pbsv_14259:HG4_PB_HySA_20758:HG2_PB_HySA_25996:HG4_PB_assemblyticsfalcon_7108:HG3_PB_SVrefine2Falcon1Dovetail_8613:HG4_PB_pbsv_14223:HG4_PB_SVrefine2PBcRDovetail_7118:HG4_Ill_svaba_17808:HG4_Ill_scalpel_13162:HG4_Ill_Krunchall_19696:HG4_Ill_GATKHC_22741:HG4_Ill_GATKHCSBGrefine_9802:HG4_Ill_250bpfermikitraw_18777:HG4_Ill_150bpfermikitraw_18084:HG3_Ill_svaba_17930:HG3_Ill_Krunchall_18996:HG3_Ill_GATKHCSBGrefine_9398:HG3_Ill_250bpfermikitraw_18490:HG3_Ill_150bpfermikitraw_17992:HG3_10X_allpass_2765:HG2_PB_assemblyticsfalcon_7224:HG2_PB_SVrefine2PBcRplusDovetail_2931:HG2_PB_SVrefine2PB10Xhap12_10300:HG2_Ill_svaba_17767:HG2_Ill_scalpel_13460:HG2_Ill_manta_3943:HG2_Ill_breakscan11_2029:HG2_Ill_SpiralSDKrefine_4499:HG2_Ill_Krunchall_19374:HG2_Ill_GATKHC_22768:HG2_Ill_GATKHCSBGrefine_9507:HG2_Ill_FB_12274:HG2_Ill_250bpfermikitraw_19035:HG2_Ill_150bpfermikitraw_17948:HG2_CG_vcfBeta_8048:HG2_10X_SVrefine210Xhap12_9909:HG3_PB_SVrefine2PBcRDovetail_6713;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9909:HG2_CG_vcfBeta_8048:HG2_Ill_150bpfermikitraw_17948:HG2_Ill_250bpfermikitraw_19035:HG2_Ill_FB_12274:HG2_Ill_GATKHCSBGrefine_9507:HG2_Ill_GATKHC_22768:HG2_Ill_Krunchall_19374:HG2_Ill_SpiralSDKrefine_4499:HG2_Ill_breakscan11_2029:HG2_Ill_manta_3943:HG2_Ill_scalpel_13460:HG2_Ill_svaba_17767:HG2_PB_SVrefine2PB10Xhap12_10300:HG2_PB_SVrefine2PBcRplusDovetail_2931:HG2_PB_assemblyticsfalcon_7224:HG3_10X_allpass_2765:HG3_Ill_150bpfermikitraw_17992:HG3_Ill_250bpfermikitraw_18490:HG3_Ill_GATKHCSBGrefine_9398:HG3_Ill_Krunchall_18996:HG3_Ill_svaba_17930:HG4_Ill_150bpfermikitraw_18084:HG4_Ill_250bpfermikitraw_18777:HG4_Ill_GATKHCSBGrefine_9802:HG4_Ill_GATKHC_22741:HG4_Ill_Krunchall_19696:HG4_Ill_scalpel_13162:HG4_Ill_svaba_17808:HG4_PB_SVrefine2PBcRDovetail_7118:HG4_PB_pbsv_14223;NumExactMatchSVs=31;ClusterMaxShiftDist=0.115385;ClusterMaxSizeDiff=0.115385;ClusterMaxEditDist=0.134615;PBcalls=13;Illcalls=23;TenXcalls=2;CGcalls=1;PBexactcalls=5;Illexactcalls=23;TenXexactcalls=2;CGexactcalls=1;HG2count=18;HG3count=10;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-52;DistBack=30397;DistForward=-43;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=13:85270033-85270096;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=999.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:53:1/1:0:14:1:16:1/1:0:17:0:15:1/1:0:29:./.:.:.:.:.:.
chr13	85800412	HG2_PB_PB10Xdip_9204	CCATCCTGGCTAACATGATGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTAGGCGTGGTGGCGTGTACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGACCCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCACACCACTGCACTCCAGCCTGGGGACAGAGCAAGACTCTGCCAAAAAAAAACCATTACAATAATTTTTTCATTATATTTTGAACCATGCCAGACTATATATGAATGATAAAATTTTTATATGATTATTAAGAATTATTTTTACTTACATATTATATAAATTCATTTTCTAAATTCAAATTGCTATATATCCCAATTATTAAATCTTTATAAGATGATGAGCTTAAACAAAGAATATTCCCAAGGAATTCTAAAGAATGTAAATTTGTAATAGATAATATCATAGTGTCACTGCCAAGAAAAATGTTCAAGTCTGAGTGCCTCTGGAAATTCTCCTTTAAGATATTCAAACTAATAATGTTTATTGTTTGATTTTTCATTTGCTTTGTCTACCTTTTTTTTTTTTTGAGACGGAGTCTCCCTCTTGTCACCCAGGCTACAGTGCAATGGTGTGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCATCACGCTTGGCTAATTTTTGTACTTTTACTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTGAACTTAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTATTAGGATTACAGGCGTGAGCCACCATGCCCGACCTGCTTTCTCTTCTAATGCAAAAAAAAAAAAGAAAGCTACTAATACATTTCTACAGTGAGAAAGCATCATTGATCATCTGCGACATTAAAACATAAACCTAAAAACCATTTGGCTTTTCAATATCCTCTATTTTTGCACATTTTGACTTCCAGAAAATTTTCAGAAAACATATTGCAAAACTGAAAACAAAACCAACAAAAACTCCTATGTTCAGATAACTATTATAATTTTAAAATAAGTGTTATTTTTATTAAAATAATAAATGCTATTTGAAAAGTGTGAAGGAAAGATTATAAACAGATAAGTCAGCAACATACTGGAAGATGGAAAGCTTTTGTTAAATTGTAGCTGACGTTGAAGCATAAACATACCTACTTGTTTAATGGTGAACACAAATGAGAATGTGCCCGTTGTAAAGACAAGAATCCAGAAAGGCTCAGCAATTTCGGCACGAGTTACCCAAATCCCAGAGTATACGACACATTGAAAATATGTGCATTTGATGTAGTGTATGTAAGGAGAAATTCTTTCTCTCAGATTTCACAGGCAGCTGCTTACTTTCTTTGCCTAAACAGAATATAGGAAGATCATGTTTGAGACAGAAAACAAAAGAGGCTTTATATCCAATAGCGCCAGGTAGGAATTGGAATGCAGGTGAATGTCATAACAAAAATTGAATAAGTAAAAATCCACATACTGAATTACATTACATAAGCCATATTTTCCTACACGGATCACAGACTACTTGCAATCATTTTTGTGATCCTATTGTAAAAGAGAGAAAATTGCCCTATAAATAAATTATTCAATAAAGAAAAAGACATGGGCTCATGGAAGCAAGTGATATTACATAAGAGTAAAAGCCAAAGCTCTGTTTGCTAGTCCAGGCCAGCTGAAGGATGTCCCACCAGTGCAGTAGCACGGAGCAGAAACCCTGAACTCGGTTTAATGCCTTGCTAACTGCCTTTGAAATTCTTAATAATTCTATATTTGACCTTTTGTAAGTGACACCCTATAGGACAATGAATGTCACATGTACATAAGGAGAAAATATATGTTTGCAATTCTGTAACATTCCATTTGTATATAGCATTCTACATGCCTCAGGAGCACACAATTCTGGAGGTCACAAGATGCCCTGGAGTTTAGCAAGACCCCAAGCTGGTGCAAGGTAATTGTGTTGCATATATGATTAAGTGGGGCACTGACAGCCTGAGAAGCAACACATTCCTTTTGAACCAGAACTTGCTTTGAAAGCACATAAAATGCCACGCATGGTGTCTCACGCCTGTCATCCCAGCACTTTGGGACAAAGAGGCAAGAAGATTCCTTAAGGCCAAGAGTTTGAGACTAGCCTGGGCAATACGGTGGGGACACGCTCTCCATACACACCCCCCACCACCCCGCCAAAAAAAAAAAGCAAAAAAGCTAATCACATTCTAAGAAACAAGAATGACCAAGGAACTCTATCATATTCTTTATTTTTCATGTTACTTCCCCGTATTAGTAAATCACATGCAATTAAAAAAAATGATGACAAAGAAGGAAAGGGAAATGTCAGGTAGTCACAGCTTCTTTTCTTACTCATCAGTAAACCAGTAGTATACAGTGTTGGTAGAATGGGTTTACCAAGTGAAATAAGAATACATTAGGTAGTTTTGTGTAGTGCTTTCACACTTCTAAGAATGAGATTCATGCGAGTTTACAAATGATGCAATAAAATTTAAGTAATTTTGGTGATCCTTCACATGAGTTACAAGCTATTAAGAATGTATTTAAAATAGGCATTGCGTAATATAAAGATGAACAGTAAAAAATTGTGTTAATCTGATTTTTTAAACTTAGAAAAAAACACTTAAAAAGATACCATGACAATGAGAGAGAGAGAGATGAAACTGCAGAAAAAACAATGAAAGTTTTATATTTTAGTCCCATTATTGACAGTTTTTTCTTGCTTTTTGAAAGAGGGTTTTCATGTATTCACTAGGTCCCGCAAGTTCTATGGCTGTGCAGGGTCTGATGCTAGTTGATAGTGACCTAGGACTACAGCTGAGTCTGACGTGAAGCTCAACCTTTCTAAATCAGAATAGAAGAGCCAATGTAAAATTGCAAGGCTCTTTTTCCCAAAGGGAAGGGGGGAA	GGTCAAGAGATCAAG	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1429:HG3_PB_pbsv_13921:HG2_PB_pbsv_14265:HG2_Ill_SpiralSDKrefine_4503:HG2_Ill_tnscope_1581:HG4_PB_SVrefine2Falcon1Dovetail_8663:HG3_PB_SVrefine2PBcRDovetail_6715:HG3_PB_SVrefine2Falcon1Dovetail_8617:HG2_PB_assemblyticsPBcR_6965:HG2_PB_SVrefine2PBcRplusDovetail_2934:HG2_PB_SVrefine2PB10Xhap12_10303:HG2_PB_SVrefine2Falcon2Bionano_7095:HG2_PB_SVrefine2Falcon1plusDovetail_3109:HG2_PB_PB10Xdip_9204:HG2_10X_allpass_2273:HG3_Ill_Krunchall_19004:HG2_Ill_Krunchall_19382:HG4_PB_assemblyticsfalcon_7116:HG3_PB_assemblyticsfalcon_7206:HG2_PB_assemblyticsfalcon_7234;NumClusterSVs=20;ExactMatchIDs=HG2_PB_PB10Xdip_9204:HG2_PB_SVrefine2Falcon1plusDovetail_3109:HG2_PB_SVrefine2Falcon2Bionano_7095:HG2_PB_SVrefine2PB10Xhap12_10303:HG2_PB_SVrefine2PBcRplusDovetail_2934:HG2_PB_assemblyticsPBcR_6965:HG3_PB_SVrefine2Falcon1Dovetail_8617:HG3_PB_SVrefine2PBcRDovetail_6715:HG4_PB_SVrefine2Falcon1Dovetail_8663;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0299103;ClusterMaxSizeDiff=0.0299103;ClusterMaxEditDist=0.0299103;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=-2964;DistBack=-2979;DistForward=17539;DistMin=-2979;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=13:85800412-85803390;PctSeqSimilarity=0.9449;PctSizeSimilarity=0.999;PctRecOverlap=0.996;SizeDiff=-3;StartDistance=1;EndDistance=12;GTMatch=0;TruScore=97;MatchId=1000.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:49:0|1:34:2:0:21:1|0:0:29:66:0:0/1:60:14:0/1:260:117:3107:.:.
chr13	86600635	HG2_Ill_150bpfermikitraw_17966	CCATCATATATATATATATATATATATATATATATGATGGAAATTTTGACTTTTAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2030:HG2_PB_HySA_26025:HG2_PB_pbsv_14274:HG4_PB_HySA_20778:HG4_PB_pbsv_14238:HG4_Ill_svaba_17825:HG4_Ill_SVrefine2DISCOVARDovetail_10104:HG4_Ill_Krunchall_19716:HG4_Ill_GATKHC_22758:HG4_Ill_GATKHCSBGrefine_9816:HG4_Ill_250bpfermikitraw_18795:HG4_Ill_150bpfermikitraw_18100:HG4_10X_allpass_2662:HG2_Ill_svaba_17783:HG2_Ill_scalpel_13476:HG2_Ill_manta_3945:HG2_Ill_SpiralSDKrefine_4509:HG2_Ill_SVrefine2DISCOVARplusDovetail_3453:HG2_Ill_Krunchall_19392:HG2_Ill_GATKHC_22793:HG2_Ill_GATKHCSBGrefine_9518:HG2_Ill_250bpfermikitraw_19055:HG2_Ill_150bpfermikitraw_17966:HG2_10X_SVrefine210Xhap12_9912;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9912:HG2_Ill_150bpfermikitraw_17966:HG2_Ill_250bpfermikitraw_19055:HG2_Ill_GATKHCSBGrefine_9518:HG2_Ill_GATKHC_22793:HG2_Ill_Krunchall_19392:HG2_Ill_SVrefine2DISCOVARplusDovetail_3453:HG2_Ill_SpiralSDKrefine_4509:HG2_Ill_manta_3945:HG2_Ill_scalpel_13476:HG2_Ill_svaba_17783:HG4_10X_allpass_2662:HG4_Ill_150bpfermikitraw_18100:HG4_Ill_250bpfermikitraw_18795:HG4_Ill_GATKHCSBGrefine_9816:HG4_Ill_GATKHC_22758:HG4_Ill_Krunchall_19716:HG4_Ill_SVrefine2DISCOVARDovetail_10104:HG4_Ill_svaba_17825;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0900901;ClusterMaxSizeDiff=0.0900901;ClusterMaxEditDist=0.126126;PBcalls=4;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-57;DistBack=25107;DistForward=14745;DistMin=14745;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=13:86600636-86600710;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1001.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:32:0|1:51:1:1:30:./.:15:1:6:18:0/1:25:28:./.:.:.:.:.:.
chr13	86659202	HG2_PB_SVrefine2PBcRplusDovetail_2940	TTTTTAAATTTTGTGTAGACATGGAGTCTAGCCATCTTGACCTGGCTAGTCTTGAACTCCTGGCCTCAAGCAATTTTCCTGCTGCAGACTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCCGACCACAAATGTGTTTCAATTGACTAAATAGTGCTGGGGTTACAGGTGTGAACCACTGCACCCACTAAGAATTTTTTTGGGAAAAAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9913:HG4_Ill_GATKHCSBGrefine_9818:HG2_Ill_GATKHCSBGrefine_9520:HG2_PB_assemblyticsPBcR_6978:HG2_PB_assemblyticsfalcon_7244:HG4_Ill_manta_3358:HG2_PB_PB10Xdip_9221:HG2_PB_PB10Xdip_9220:HG2_Ill_manta_3946:HG2_Ill_SpiralSDKrefine_4511:HG4_PB_pbsv_14240:HG4_Ill_Spiral_1110:HG2_Ill_Spiral_950:HG4_Ill_Krunchall_19719:HG2_Ill_Krunchall_19395:HG4_Ill_scalpel_13175:HG4_Ill_MetaSV_1401:HG4_10X_allpass_2663:HG2_PB_pbsv_14276:HG2_PB_SVrefine2PBcRplusDovetail_2940:HG2_PB_SVrefine2PB10Xhap12_10310:HG2_PB_SVrefine2Falcon1plusDovetail_3113:HG2_Ill_scalpel_13478:HG2_Ill_MetaSV_1317:HG2_10X_allpass_2274;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9913:HG4_Ill_scalpel_13175:HG4_Ill_MetaSV_1401:HG4_10X_allpass_2663:HG2_PB_pbsv_14276:HG2_PB_SVrefine2PBcRplusDovetail_2940:HG2_PB_SVrefine2PB10Xhap12_10310:HG2_PB_SVrefine2Falcon1plusDovetail_3113:HG2_Ill_scalpel_13478:HG2_Ill_MetaSV_1317:HG2_10X_allpass_2274;NumExactMatchSVs=11;ClusterMaxShiftDist=0.113744;ClusterMaxSizeDiff=0.113744;ClusterMaxEditDist=0.118483;PBcalls=9;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-215;DistBack=-13;DistForward=21911;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=13:86659203-86659430;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1002.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:40:0|1:42:0:1:39:0|1:58:0:0:25:0/1:43:23:./.:.:.:.:.:.
chr13	89003264	HG4_PB_SVrefine2PBcRDovetail_7133	TCTAAATCTAGTATTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9919:HG2_PB_assemblyticsfalcon_7261:HG4_PB_HySA_20806:HG4_Ill_Krunchall_19742:HG2_Ill_Krunchall_19420:HG4_PB_assemblyticsfalcon_7146:HG3_PB_assemblyticsfalcon_7239:HG2_PB_assemblyticsPBcR_7001:HG4_PB_pbsv_14255:HG3_PB_pbsv_13945:HG2_PB_pbsv_14294:HG3_PB_HySA_21532:HG2_PB_HySA_26064:HG4_Ill_MetaSV_1404:HG3_Ill_MetaSV_1432:HG2_Ill_tnscope_1582:HG2_Ill_MetaSV_1319:HG4_PB_SVrefine2PBcRDovetail_7133:HG4_PB_SVrefine2Falcon1Dovetail_8678:HG4_Ill_scalpel_13189:HG4_Ill_manta_3362:HG4_Ill_GATKHCSBGrefine_9827:HG4_10X_allpass_2665:HG3_PB_SVrefine2PBcRDovetail_6725:HG3_PB_SVrefine2Falcon1Dovetail_8632:HG3_Ill_scalpel_13739:HG3_Ill_manta_3226:HG3_Ill_GATKHCSBGrefine_9422:HG3_10X_allpass_2766:HG2_PB_SVrefine2PBcRplusDovetail_2947:HG2_PB_SVrefine2PB10Xhap12_10317:HG2_PB_SVrefine2Falcon2Bionano_7106:HG2_PB_SVrefine2Falcon1plusDovetail_3121:HG2_Ill_breakscan11_2031:HG2_Ill_SVrefine2DISCOVARplusDovetail_3461:HG2_Ill_GATKHCSBGrefine_9532:HG2_10X_allpass_2275;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9919:HG4_PB_SVrefine2PBcRDovetail_7133:HG4_PB_SVrefine2Falcon1Dovetail_8678:HG4_Ill_scalpel_13189:HG4_Ill_manta_3362:HG4_Ill_GATKHCSBGrefine_9827:HG4_10X_allpass_2665:HG3_PB_SVrefine2PBcRDovetail_6725:HG3_PB_SVrefine2Falcon1Dovetail_8632:HG3_Ill_scalpel_13739:HG3_Ill_manta_3226:HG3_Ill_GATKHCSBGrefine_9422:HG3_10X_allpass_2766:HG2_PB_SVrefine2PBcRplusDovetail_2947:HG2_PB_SVrefine2PB10Xhap12_10317:HG2_PB_SVrefine2Falcon2Bionano_7106:HG2_PB_SVrefine2Falcon1plusDovetail_3121:HG2_Ill_breakscan11_2031:HG2_Ill_SVrefine2DISCOVARplusDovetail_3461:HG2_Ill_GATKHCSBGrefine_9532:HG2_10X_allpass_2275;NumExactMatchSVs=21;ClusterMaxShiftDist=0.112805;ClusterMaxSizeDiff=0.112805;ClusterMaxEditDist=0.112805;PBcalls=18;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=3114;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=13:89003265-89003619;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1003.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:46:1/1:0:18:0:18:1/1:0:17:0:23:1/1:0:46:./.:2:7:.:.:.
chr13	89372281	HG4_PB_SVrefine2PBcRDovetail_7136	AGTCCATCCAGTTATGACCCTAAAACAGAAGAGAAATGAGAGAAGAAAACCTGCTTATGGGCAGAAATTTCATTAGTACTGTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9920:HG4_PB_HySA_20811:HG2_PB_HySA_26071:HG4_PB_pbsv_14259:HG3_PB_pbsv_13948:HG2_PB_pbsv_14297:HG3_PB_HySA_21536:HG4_PB_SVrefine2PBcRDovetail_7136:HG4_PB_SVrefine2Falcon1Dovetail_8681:HG4_Ill_SVrefine2DISCOVARDovetail_10119:HG4_Ill_GATKHCSBGrefine_9831:HG4_Ill_250bpfermikitraw_18823:HG4_Ill_150bpfermikitraw_18125:HG3_PB_SVrefine2PBcRDovetail_6728:HG3_PB_SVrefine2Falcon1Dovetail_8635:HG3_Ill_SVrefine2DISCOVARDovetail_10247:HG3_Ill_GATKHCSBGrefine_9425:HG3_Ill_250bpfermikitraw_18528:HG3_Ill_150bpfermikitraw_18031:HG2_PB_assemblyticsPBcR_7006:HG2_PB_SVrefine2PB10Xhap12_10319:HG2_PB_SVrefine2Falcon1plusDovetail_3123:HG2_Ill_manta_3950:HG2_Ill_SpiralSDKrefine_4528:HG2_Ill_SVrefine2DISCOVARplusDovetail_3462:HG2_Ill_GATKHCSBGrefine_9536:HG2_Ill_250bpfermikitraw_19088:HG2_Ill_150bpfermikitraw_17999;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9920:HG4_PB_SVrefine2PBcRDovetail_7136:HG4_PB_SVrefine2Falcon1Dovetail_8681:HG4_Ill_SVrefine2DISCOVARDovetail_10119:HG4_Ill_GATKHCSBGrefine_9831:HG4_Ill_250bpfermikitraw_18823:HG4_Ill_150bpfermikitraw_18125:HG3_PB_SVrefine2PBcRDovetail_6728:HG3_PB_SVrefine2Falcon1Dovetail_8635:HG3_Ill_SVrefine2DISCOVARDovetail_10247:HG3_Ill_GATKHCSBGrefine_9425:HG3_Ill_250bpfermikitraw_18528:HG3_Ill_150bpfermikitraw_18031:HG2_PB_assemblyticsPBcR_7006:HG2_PB_SVrefine2PB10Xhap12_10319:HG2_PB_SVrefine2Falcon1plusDovetail_3123:HG2_Ill_manta_3950:HG2_Ill_SpiralSDKrefine_4528:HG2_Ill_SVrefine2DISCOVARplusDovetail_3462:HG2_Ill_GATKHCSBGrefine_9536:HG2_Ill_250bpfermikitraw_19088:HG2_Ill_150bpfermikitraw_17999;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.0243902;PBcalls=13;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-82;DistBack=1;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=85;REFWIDENED=13:89372282-89372448;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1004.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:71:./.:0:0:0:4:./.:0:4:0:0:1/1:0:35:./.:.:.:.:.:.
chr13	90421367	HG2_Ill_scalpel_13504	TAGAAATGACCCACCTGCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_951:HG3_Ill_Krunchall_19047:HG2_Ill_Krunchall_19436:HG3_Ill_Krunchall_19046:HG2_Ill_Krunchall_19435:HG2_PB_pbsv_14306:HG3_PB_pbsv_13960:HG3_PB_HySA_21544:HG3_Ill_MetaSV_1442:HG4_PB_assemblyticsfalcon_7164:HG4_PB_SVrefine2Falcon1Dovetail_8687:HG3_PB_assemblyticsfalcon_7256:HG3_PB_SVrefine2PBcRDovetail_6733:HG3_PB_SVrefine2Falcon1Dovetail_8642:HG3_Ill_scalpel_13751:HG3_Ill_manta_3233:HG3_Ill_SVrefine2DISCOVARDovetail_10257:HG3_Ill_GATKHCSBGrefine_9435:HG3_10X_allpass_2769:HG2_PB_SVrefine2PB10Xhap12_10323:HG2_PB_SVrefine2Falcon2Bionano_7111:HG2_Ill_scalpel_13504:HG2_Ill_manta_3954:HG2_Ill_SpiralSDKrefine_4536:HG2_Ill_SVrefine2DISCOVARplusDovetail_3470:HG2_Ill_MetaSV_1325:HG2_Ill_GATKHCSBGrefine_9542:HG2_10X_allpass_2276:HG2_10X_SVrefine210Xhap12_9927:HG2_Ill_breakscan11_2032:HG3_Ill_Spiral_14865;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9927:HG2_10X_allpass_2276:HG2_Ill_GATKHCSBGrefine_9542:HG2_Ill_MetaSV_1325:HG2_Ill_SVrefine2DISCOVARplusDovetail_3470:HG2_Ill_SpiralSDKrefine_4536:HG2_Ill_manta_3954:HG2_Ill_scalpel_13504:HG2_PB_SVrefine2Falcon2Bionano_7111:HG2_PB_SVrefine2PB10Xhap12_10323:HG3_10X_allpass_2769:HG3_Ill_GATKHCSBGrefine_9435:HG3_Ill_SVrefine2DISCOVARDovetail_10257:HG3_Ill_manta_3233:HG3_Ill_scalpel_13751:HG3_PB_SVrefine2Falcon1Dovetail_8642:HG3_PB_SVrefine2PBcRDovetail_6733:HG3_PB_assemblyticsfalcon_7256:HG4_PB_SVrefine2Falcon1Dovetail_8687:HG4_PB_assemblyticsfalcon_7164;NumExactMatchSVs=20;ClusterMaxShiftDist=0.012987;ClusterMaxSizeDiff=0.012987;ClusterMaxEditDist=0.0130719;PBcalls=10;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=14;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-153;DistBack=10891;DistForward=-137;DistMin=-137;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=13:90421368-90421536;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1005.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:28:0|1:35:1:3:33:0|1:23:1:0:18:0/1:14:22:./.:.:.:.:.:.
chr13	90674184	HG2_Ill_GATKHCSBGrefine_9543	AAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_14307:HG2_PB_assemblyticsfalcon_7279:HG3_PB_HySA_21548:HG4_PB_HySA_20822:HG2_PB_assemblyticsPBcR_7024:HG4_PB_assemblyticsfalcon_7169:HG3_PB_assemblyticsfalcon_7261:HG2_PB_HySA_26084:HG3_Ill_GATKHC_22729:HG3_Ill_GATKHCSBGrefine_9436:HG2_Ill_svaba_17829:HG2_Ill_GATKHC_22847:HG2_Ill_GATKHCSBGrefine_9543:HG2_Ill_FB_12323:HG4_Ill_FB_12297:HG4_Ill_svaba_17864:HG4_Ill_GATKHC_22809:HG4_Ill_GATKHCSBGrefine_9837:HG4_Ill_150bpfermikitraw_18138:HG4_PB_pbsv_14266:HG3_PB_pbsv_13962;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_FB_12323:HG2_Ill_GATKHCSBGrefine_9543:HG2_Ill_GATKHC_22847:HG2_Ill_svaba_17829:HG3_Ill_GATKHCSBGrefine_9436:HG3_Ill_GATKHC_22729;NumExactMatchSVs=6;ClusterMaxShiftDist=0.204082;ClusterMaxSizeDiff=0.204082;ClusterMaxEditDist=0.387755;PBcalls=10;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-51;DistBack=68071;DistForward=2681;DistMin=2681;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=13:90674183-90674237;PctSeqSimilarity=0.9278;PctSizeSimilarity=0.8627;PctRecOverlap=0.8654;SizeDiff=7;StartDistance=-7;EndDistance=0;GTMatch=0;TruScore=88;MatchId=1006.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:5:28:1:13:./.:3:9:1:7:0/1:4:18:./.:.:.:.:.:.
chr13	91160038	HG2_PB_SVrefine2PBcRplusDovetail_2953	TAAAAGGGTTACTTTAAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2033:HG4_PB_assemblyticsfalcon_7176:HG3_PB_assemblyticsfalcon_7267:HG2_PB_assemblyticsPBcR_7028:HG2_PB_HySA_26088:HG4_PB_pbsv_14272:HG4_Ill_Krunchall_19766:HG2_PB_assemblyticsfalcon_7284:HG4_Ill_Krunchall_19765:HG3_Ill_Krunchall_19056:HG2_PB_pbsv_14310:HG4_PB_HySA_20826:HG3_PB_HySA_21553:HG3_Ill_MetaSV_1446:HG2_Ill_tnscope_1585:HG2_Ill_MetaSV_1327:HG4_PB_SVrefine2PBcRDovetail_7141:HG4_PB_SVrefine2Falcon1Dovetail_8693:HG4_Ill_scalpel_13202:HG4_Ill_manta_3368:HG4_Ill_SVrefine2DISCOVARDovetail_10128:HG4_Ill_MetaSV_1411:HG4_Ill_GATKHCSBGrefine_9842:HG4_10X_allpass_2668:HG3_PB_pbsv_13967:HG3_PB_SVrefine2PBcRDovetail_6735:HG3_PB_SVrefine2Falcon1Dovetail_8646:HG3_Ill_scalpel_13758:HG3_Ill_manta_3236:HG3_Ill_SVrefine2DISCOVARDovetail_10264:HG3_Ill_GATKHCSBGrefine_9440:HG3_10X_allpass_2770:HG2_PB_SVrefine2PBcRplusDovetail_2953:HG2_PB_SVrefine2PB10Xhap12_10325:HG2_PB_SVrefine2Falcon2Bionano_7112:HG2_PB_SVrefine2Falcon1plusDovetail_3128:HG2_Ill_scalpel_13507:HG2_Ill_manta_3956:HG2_Ill_SpiralSDKrefine_4541:HG2_Ill_SVrefine2DISCOVARplusDovetail_3473:HG2_Ill_GATKHCSBGrefine_9546:HG2_10X_allpass_2277:HG2_10X_SVrefine210Xhap12_9929;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9929:HG2_10X_allpass_2277:HG2_Ill_GATKHCSBGrefine_9546:HG2_Ill_SVrefine2DISCOVARplusDovetail_3473:HG2_Ill_SpiralSDKrefine_4541:HG2_Ill_manta_3956:HG2_Ill_scalpel_13507:HG2_PB_SVrefine2Falcon1plusDovetail_3128:HG2_PB_SVrefine2Falcon2Bionano_7112:HG2_PB_SVrefine2PB10Xhap12_10325:HG2_PB_SVrefine2PBcRplusDovetail_2953:HG3_10X_allpass_2770:HG3_Ill_GATKHCSBGrefine_9440:HG3_Ill_SVrefine2DISCOVARDovetail_10264:HG3_Ill_manta_3236:HG3_Ill_scalpel_13758:HG3_PB_SVrefine2Falcon1Dovetail_8646:HG3_PB_SVrefine2PBcRDovetail_6735:HG3_PB_pbsv_13967:HG4_10X_allpass_2668:HG4_Ill_GATKHCSBGrefine_9842:HG4_Ill_MetaSV_1411:HG4_Ill_SVrefine2DISCOVARDovetail_10128:HG4_Ill_manta_3368:HG4_Ill_scalpel_13202:HG4_PB_SVrefine2Falcon1Dovetail_8693:HG4_PB_SVrefine2PBcRDovetail_7141;NumExactMatchSVs=27;ClusterMaxShiftDist=0.119835;ClusterMaxSizeDiff=0.119835;ClusterMaxEditDist=0.119835;PBcalls=18;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-249;DistBack=-312;DistForward=-235;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=13:91160039-91160302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1007.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:./.:0:7:0:3:1/1:0:26:0:27:1/1:0:72:./.:.:.:.:.:.
chr13	92279248	HG3_Ill_SVrefine2DISCOVARDovetail_10270	TGAACTCATCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTGCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9934:HG2_10X_allpass_2278:HG4_PB_assemblyticsfalcon_7186:HG3_PB_assemblyticsfalcon_7278:HG2_PB_assemblyticsPBcR_7038:HG2_PB_assemblyticsfalcon_7293:HG4_Ill_Krunchall_19774:HG3_Ill_Krunchall_19068:HG2_Ill_Krunchall_19451:HG2_PB_HySA_26096:HG4_PB_pbsv_14277:HG3_PB_pbsv_13974:HG4_PB_HySA_20835:HG3_PB_HySA_21568:HG3_Ill_MetaSV_1449:HG2_Ill_tnscope_1586:HG2_Ill_MetaSV_1329:HG4_PB_SVrefine2PBcRDovetail_7145:HG4_PB_SVrefine2Falcon1Dovetail_8699:HG4_Ill_svaba_17873:HG4_Ill_scalpel_13207:HG4_Ill_manta_3370:HG4_Ill_SVrefine2DISCOVARDovetail_10134:HG4_Ill_MetaSV_1414:HG4_Ill_GATKHCSBGrefine_9844:HG4_10X_allpass_2669:HG3_PB_SVrefine2PBcRDovetail_6741:HG3_PB_SVrefine2Falcon1Dovetail_8652:HG3_Ill_svaba_17994:HG3_Ill_scalpel_13765:HG3_Ill_manta_3238:HG3_Ill_SVrefine2DISCOVARDovetail_10270:HG3_Ill_GATKHCSBGrefine_9443:HG3_10X_allpass_2773:HG2_PB_pbsv_14315:HG2_PB_SVrefine2PBcRplusDovetail_2958:HG2_PB_SVrefine2PB10Xhap12_10330:HG2_PB_SVrefine2Falcon2Bionano_7117:HG2_PB_SVrefine2Falcon1plusDovetail_3133:HG2_Ill_svaba_17838:HG2_Ill_scalpel_13514:HG2_Ill_manta_3957:HG2_Ill_SVrefine2DISCOVARplusDovetail_3478:HG2_Ill_GATKHCSBGrefine_9548;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9934:HG4_PB_SVrefine2PBcRDovetail_7145:HG4_PB_SVrefine2Falcon1Dovetail_8699:HG4_Ill_svaba_17873:HG4_Ill_scalpel_13207:HG4_Ill_manta_3370:HG4_Ill_SVrefine2DISCOVARDovetail_10134:HG4_Ill_MetaSV_1414:HG4_Ill_GATKHCSBGrefine_9844:HG4_10X_allpass_2669:HG3_PB_SVrefine2PBcRDovetail_6741:HG3_PB_SVrefine2Falcon1Dovetail_8652:HG3_Ill_svaba_17994:HG3_Ill_scalpel_13765:HG3_Ill_manta_3238:HG3_Ill_SVrefine2DISCOVARDovetail_10270:HG3_Ill_GATKHCSBGrefine_9443:HG3_10X_allpass_2773:HG2_PB_pbsv_14315:HG2_PB_SVrefine2PBcRplusDovetail_2958:HG2_PB_SVrefine2PB10Xhap12_10330:HG2_PB_SVrefine2Falcon2Bionano_7117:HG2_PB_SVrefine2Falcon1plusDovetail_3133:HG2_Ill_svaba_17838:HG2_Ill_scalpel_13514:HG2_Ill_manta_3957:HG2_Ill_SVrefine2DISCOVARplusDovetail_3478:HG2_Ill_GATKHCSBGrefine_9548;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0943683;ClusterMaxSizeDiff=0.0943683;ClusterMaxEditDist=0.0943683;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=17974;DistForward=16620;DistMin=16620;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=13:92279249-92279599;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1008.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:86:1/1:0:60:1:37:1/1:0:14:0:6:1/1:0:52:./.:2:30:.:.:.
chr13	93555561	HG2_Ill_SpiralSDKrefine_4556	ATTATTTAATAACAAGGTAAACATCACAAGAGTTTTATATTTGTTTTTATTTCTTAGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9941:HG2_PB_pbsv_14324:HG4_PB_pbsv_14288:HG2_PB_HySA_26110:HG4_PB_SVrefine2PBcRDovetail_7149:HG4_PB_HySA_20846:HG4_Ill_svaba_17886:HG4_Ill_manta_3373:HG4_Ill_SVrefine2DISCOVARDovetail_10141:HG4_Ill_Krunchall_19786:HG4_Ill_GATKHCSBGrefine_9849:HG4_Ill_250bpfermikitraw_18858:HG4_Ill_150bpfermikitraw_18161:HG2_PB_SVrefine2Falcon1plusDovetail_3139:HG2_Ill_svaba_17847:HG2_Ill_manta_3960:HG2_Ill_SpiralSDKrefine_4556:HG2_Ill_SVrefine2DISCOVARplusDovetail_3489:HG2_Ill_GATKHCSBGrefine_9552:HG2_Ill_250bpfermikitraw_19122:HG2_Ill_150bpfermikitraw_18035;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9941:HG4_PB_SVrefine2PBcRDovetail_7149:HG4_PB_HySA_20846:HG4_Ill_svaba_17886:HG4_Ill_manta_3373:HG4_Ill_SVrefine2DISCOVARDovetail_10141:HG4_Ill_Krunchall_19786:HG4_Ill_GATKHCSBGrefine_9849:HG4_Ill_250bpfermikitraw_18858:HG4_Ill_150bpfermikitraw_18161:HG2_PB_SVrefine2Falcon1plusDovetail_3139:HG2_Ill_svaba_17847:HG2_Ill_manta_3960:HG2_Ill_SpiralSDKrefine_4556:HG2_Ill_SVrefine2DISCOVARplusDovetail_3489:HG2_Ill_GATKHCSBGrefine_9552:HG2_Ill_250bpfermikitraw_19122:HG2_Ill_150bpfermikitraw_18035;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0350877;PBcalls=6;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=63199;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=58;REFWIDENED=13:93555562-93555676;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1009.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:0|1:35:4:1:27:1|0:0:7:25:0:0/1:31:17:./.:.:.:.:.:.
chr13	93650580	HG4_Ill_GATKHCSBGrefine_9851	GCTGGAGTGCAGTGGCGGGATCTCTGCTCACTGCAAGCTCCACCTCCCAGGTTCAAGC	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_7053:HG2_PB_HySA_26112:HG3_PB_assemblyticsfalcon_7292:HG4_Ill_svaba_17888:HG4_Ill_scalpel_13216:HG4_Ill_GATKHC_22836:HG4_Ill_GATKHCSBGrefine_9851:HG4_CG_vcfBeta_9081:HG2_PB_pbsv_14327:HG2_Ill_svaba_17848:HG2_Ill_scalpel_13520:HG2_Ill_GATKHC_22871:HG2_CG_vcfBeta_8068:HG4_PB_pbsv_14291:HG2_PB_PB10Xdip_9285:HG2_PB_PB10Xdip_9286;NumClusterSVs=16;ExactMatchIDs=HG2_PB_PB10Xdip_9285:HG2_CG_vcfBeta_8068:HG2_Ill_GATKHC_22871:HG2_Ill_scalpel_13520:HG2_Ill_svaba_17848:HG2_PB_pbsv_14327:HG4_CG_vcfBeta_9081:HG4_Ill_GATKHCSBGrefine_9851:HG4_Ill_GATKHC_22836:HG4_Ill_scalpel_13216:HG4_Ill_svaba_17888;NumExactMatchSVs=11;ClusterMaxShiftDist=0.165138;ClusterMaxSizeDiff=0.165138;ClusterMaxEditDist=0.165138;PBcalls=7;Illcalls=7;TenXcalls=0;CGcalls=2;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=2;HG2count=9;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=-8;DistForward=6499;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=13:93650579-93650639;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1010.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:38:./.:3:22:19:9:1|0:0:7:15:1:0/1:9:9:./.:.:.:.:.:.
chr13	93883578	HG4_Ill_250bpfermikitraw_18865	ATATACGTATATATATATATACATATATATATATACGTATATATATATATATATACATATATATATATATATGTATATATATATATATATATATATATACG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_14329:HG2_PB_assemblyticsfalcon_7312:HG4_Ill_GATKHC_22841:HG4_Ill_GATKHCSBGrefine_9853:HG2_Ill_GATKHC_22874:HG2_Ill_GATKHCSBGrefine_9555:HG2_PB_assemblyticsPBcR_7056:HG2_PB_SVrefine2PBcRplusDovetail_2962:HG2_PB_SVrefine2PB10Xhap12_10334:HG2_PB_SVrefine2Falcon1plusDovetail_3142:HG3_PB_HySA_21589:HG3_Ill_Krunchall_19079:HG3_PB_SVrefine2PBcRDovetail_6749:HG3_PB_assemblyticsfalcon_7295:HG4_PB_assemblyticsfalcon_7203:HG4_PB_SVrefine2Falcon1Dovetail_8706:HG4_Ill_svaba_17891:HG4_Ill_scalpel_13221:HG4_Ill_SVrefine2DISCOVARDovetail_10142:HG4_Ill_Krunchall_19792:HG4_Ill_GATKHC_22840:HG4_Ill_GATKHCSBGrefine_9852:HG4_Ill_250bpfermikitraw_18865:HG4_Ill_150bpfermikitraw_18167:HG3_PB_SVrefine2Falcon1Dovetail_8659:HG3_Ill_svaba_18005:HG3_Ill_scalpel_13774:HG3_Ill_SVrefine2DISCOVARDovetail_10278:HG3_Ill_GATKHC_22760:HG3_Ill_GATKHCSBGrefine_9447:HG2_Ill_SVrefine2DISCOVARplusDovetail_3491:HG2_Ill_GATKHC_22873:HG2_Ill_GATKHCSBGrefine_9554:HG2_10X_SVrefine210Xhap12_9945:HG4_PB_pbsv_14293:HG3_PB_pbsv_13983:HG2_PB_HySA_26117:HG3_Ill_svaba_18004:HG3_Ill_Krunchall_19078:HG3_Ill_250bpfermikitraw_18571:HG4_PB_HySA_20852:HG4_Ill_scalpel_13220:HG4_Ill_Krunchall_19791:HG4_Ill_250bpfermikitraw_18864:HG2_Ill_scalpel_13521:HG2_Ill_manta_3962:HG2_Ill_250bpfermikitraw_19125:HG2_Ill_150bpfermikitraw_18037;NumClusterSVs=48;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_8659:HG4_Ill_150bpfermikitraw_18167:HG4_Ill_250bpfermikitraw_18865:HG4_Ill_GATKHCSBGrefine_9852:HG4_Ill_GATKHC_22840:HG4_Ill_Krunchall_19792:HG4_Ill_SVrefine2DISCOVARDovetail_10142:HG4_Ill_scalpel_13221:HG4_Ill_svaba_17891:HG4_PB_SVrefine2Falcon1Dovetail_8706:HG4_PB_assemblyticsfalcon_7203;NumExactMatchSVs=11;ClusterMaxShiftDist=0.191489;ClusterMaxSizeDiff=0.191489;ClusterMaxEditDist=0.209424;PBcalls=16;Illcalls=31;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=14;HG4count=17;NumTechs=3;NumTechsExact=2;SVLEN=-100;DistBack=9307;DistForward=-87;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=27;REFWIDENED=13:93883568-93883694;PctSeqSimilarity=0.8986;PctSizeSimilarity=0.86;PctRecOverlap=0.7525;SizeDiff=14;StartDistance=11;EndDistance=25;GTMatch=0;TruScore=83;MatchId=1011.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:0:21:1:31:./.:11:9:1:25:0/1:5:42:./.:.:.:.:.:.
chr13	95082029	HG2_Ill_manta_3965	TATATATATACATATATATATATACATATATATATATGTATATATATATATG	CA	20	PASS	ClusterIDs=HG3_PB_pbsv_13990:HG3_Ill_manta_3240:HG2_Ill_manta_3965:HG2_Ill_SpiralSDKrefine_4564;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_manta_3965:HG3_Ill_manta_3240;NumExactMatchSVs=2;ClusterMaxShiftDist=0.144144;ClusterMaxSizeDiff=0.144144;ClusterMaxEditDist=0.185185;PBcalls=1;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=-64;DistForward=-25;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=13:95082028-95082081;PctSeqSimilarity=0.9478;PctSizeSimilarity=0.8929;PctRecOverlap=0.6667;SizeDiff=-6;StartDistance=19;EndDistance=14;GTMatch=1;TruScore=83;MatchId=1012.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:50:./.:11:19:9:30:./.:4:2:5:8:0/1:10:9:./.:.:.:.:.:.
chr13	95154236	HG2_Ill_SpiralSDKrefine_4565	TACTTCTGAGGCTCTGCTGAGGGTGCCTTCACTGTTCCATAGCCCCAGCCCCCACTTCTGAGGCTCTGCTGAGGGTGCCTTCACTGTTCCATAGCCCCAGCCCCTACTTCTGAGGCTCTGCTGAGGGTGCCTTCACTGTTCCATAGCCCCAGCCCCCACTTCTGAGGCTCTGCTGAGGGTGCCTTCACTGTTCCATAGCCCCAGCCCCTACTTCTGAGGCTCTGCTGAGGGTGCCTTCACTGTTCCATAGCCCCAGCCCCC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_8664:HG4_Ill_Krunchall_19808:HG3_Ill_Krunchall_19093:HG2_Ill_Krunchall_19482:HG4_Ill_Spiral_1112:HG3_Ill_Spiral_14899:HG2_Ill_Spiral_953:HG3_PB_pbsv_13991:HG2_PB_HySA_26131:HG3_PB_HySA_21599:HG4_PB_pbsv_14300:HG3_Ill_MetaSV_1453:HG2_Ill_MetaSV_1335:HG4_Ill_manta_3377:HG4_Ill_MetaSV_1420:HG4_Ill_GATKHCSBGrefine_9857:HG4_10X_allpass_2672:HG3_Ill_GATKHCSBGrefine_9456:HG3_10X_allpass_2775:HG2_Ill_manta_3966:HG2_Ill_SpiralSDKrefine_4565:HG2_Ill_GATKHCSBGrefine_9561:HG2_10X_allpass_2279:HG2_PB_pbsv_14337:HG4_PB_SVrefine2Falcon1Dovetail_8711:HG4_Ill_SVrefine2DISCOVARDovetail_10149:HG3_PB_SVrefine2PBcRDovetail_6754:HG3_Ill_SVrefine2DISCOVARDovetail_10282:HG2_PB_SVrefine2PBcRplusDovetail_2964:HG2_PB_SVrefine2PB10Xhap12_10338:HG2_PB_SVrefine2Falcon2Bionano_7124:HG2_PB_SVrefine2Falcon1plusDovetail_3146:HG2_Ill_SVrefine2DISCOVARplusDovetail_3496:HG2_10X_SVrefine210Xhap12_9952;NumClusterSVs=34;ExactMatchIDs=HG2_10X_allpass_2279:HG2_Ill_GATKHCSBGrefine_9561:HG2_Ill_SpiralSDKrefine_4565:HG2_Ill_manta_3966:HG3_10X_allpass_2775:HG3_Ill_GATKHCSBGrefine_9456:HG4_10X_allpass_2672:HG4_Ill_GATKHCSBGrefine_9857:HG4_Ill_MetaSV_1420:HG4_Ill_manta_3377;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0271318;ClusterMaxSizeDiff=0.023166;ClusterMaxEditDist=0.0620155;PBcalls=12;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-260;DistBack=3230;DistForward=-218;DistMin=-218;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=69;REFWIDENED=13:95154212-95154540;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1013.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:70:1/1:1:40:1:29:./.:1:14:0:13:1/1:0:41:./.:.:.:.:.:.
chr13	95848836	HG4_Ill_GATKHCSBGrefine_9859	GAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	G	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_10288:HG4_Ill_GATKHC_22862:HG4_Ill_GATKHCSBGrefine_9860:HG4_Ill_Krunchall_19816:HG4_Ill_250bpfermikitraw_18886:HG4_PB_assemblyticsfalcon_7224:HG4_PB_SVrefine2Falcon1Dovetail_8716:HG4_Ill_Krunchall_19815:HG4_PB_HySA_20871:HG3_PB_pbsv_14000:HG4_Ill_GATKHC_22861:HG4_Ill_GATKHCSBGrefine_9859:HG2_Ill_manta_3968:HG2_Ill_SpiralSDKrefine_4567:HG2_Ill_MetaSV_1337:HG2_Ill_GATKHC_22892:HG2_Ill_GATKHCSBGrefine_9564:HG3_Ill_MetaSV_1454:HG3_Ill_Krunchall_19101:HG3_Ill_GATKHCSBGrefine_9460:HG3_Ill_250bpfermikitraw_18594:HG4_PB_pbsv_14305:HG2_PB_pbsv_14342:HG4_PB_SVrefine2PBcRDovetail_7158:HG2_PB_SVrefine2Falcon2Bionano_7128:HG2_Ill_SVrefine2DISCOVARplusDovetail_3499:HG2_10X_SVrefine210Xhap12_9956:HG2_PB_SVrefine2Falcon1plusDovetail_3151;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9564:HG2_Ill_GATKHC_22892:HG2_Ill_MetaSV_1337:HG2_Ill_SpiralSDKrefine_4567:HG2_Ill_manta_3968:HG4_Ill_GATKHCSBGrefine_9859:HG4_Ill_GATKHC_22861;NumExactMatchSVs=7;ClusterMaxShiftDist=0.276923;ClusterMaxSizeDiff=0.276923;ClusterMaxEditDist=0.276923;PBcalls=9;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=-104;DistBack=-16;DistForward=-30;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=102;REFWIDENED=13:95848812-95849017;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1014.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:35:11:0|1:35:5:2:12:1|0:0:20:51:2:0/1:16:22:./.:.:.:.:.:.
chr13	96633422	HG2_Ill_SpiralSDKrefine_4571	TAAGACACTTTTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACGCGGTGAAACCCCGCCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTGGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_954:HG4_Ill_Krunchall_19827:HG3_Ill_Krunchall_19107:HG2_Ill_Krunchall_19492:HG4_PB_assemblyticsfalcon_7227:HG3_PB_assemblyticsfalcon_7315:HG2_PB_assemblyticsfalcon_7337:HG3_Ill_Spiral_14907:HG2_PB_pbsv_14343:HG3_PB_pbsv_14001:HG2_Ill_breakscan11_2034:HG3_Ill_MetaSV_1455:HG2_PB_HySA_26150:HG2_Ill_tnscope_1587:HG2_Ill_MetaSV_1338:HG4_PB_pbsv_14306:HG4_PB_SVrefine2PBcRDovetail_7159:HG4_PB_SVrefine2Falcon1Dovetail_8717:HG4_PB_HySA_20874:HG4_Ill_scalpel_13240:HG4_Ill_manta_3378:HG4_Ill_SVrefine2DISCOVARDovetail_10152:HG4_Ill_MetaSV_1421:HG4_Ill_GATKHCSBGrefine_9861:HG4_10X_allpass_2673:HG3_PB_SVrefine2PBcRDovetail_6756:HG3_PB_SVrefine2Falcon1Dovetail_8669:HG3_Ill_scalpel_13793:HG3_Ill_manta_3241:HG3_Ill_SVrefine2DISCOVARDovetail_10290:HG3_Ill_GATKHCSBGrefine_9462:HG3_10X_allpass_2776:HG2_PB_assemblyticsPBcR_7076:HG2_PB_SVrefine2PBcRplusDovetail_2968:HG2_PB_SVrefine2PB10Xhap12_10342:HG2_PB_SVrefine2Falcon2Bionano_7129:HG2_PB_SVrefine2Falcon1plusDovetail_3152:HG2_Ill_scalpel_13539:HG2_Ill_manta_3969:HG2_Ill_SpiralSDKrefine_4571:HG2_Ill_SVrefine2DISCOVARplusDovetail_3501:HG2_Ill_GATKHCSBGrefine_9566:HG2_10X_allpass_2280:HG2_10X_SVrefine210Xhap12_9958:HG4_Ill_Spiral_1113;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9958:HG2_10X_allpass_2280:HG2_Ill_GATKHCSBGrefine_9566:HG2_Ill_SVrefine2DISCOVARplusDovetail_3501:HG2_Ill_SpiralSDKrefine_4571:HG2_Ill_manta_3969:HG2_Ill_scalpel_13539:HG2_PB_SVrefine2Falcon1plusDovetail_3152:HG2_PB_SVrefine2Falcon2Bionano_7129:HG2_PB_SVrefine2PB10Xhap12_10342:HG2_PB_SVrefine2PBcRplusDovetail_2968:HG2_PB_assemblyticsPBcR_7076:HG3_10X_allpass_2776:HG3_Ill_GATKHCSBGrefine_9462:HG3_Ill_SVrefine2DISCOVARDovetail_10290:HG3_Ill_manta_3241:HG3_Ill_scalpel_13793:HG3_PB_SVrefine2Falcon1Dovetail_8669:HG3_PB_SVrefine2PBcRDovetail_6756:HG4_10X_allpass_2673:HG4_Ill_GATKHCSBGrefine_9861:HG4_Ill_MetaSV_1421:HG4_Ill_SVrefine2DISCOVARDovetail_10152:HG4_Ill_manta_3378:HG4_Ill_scalpel_13240:HG4_PB_HySA_20874:HG4_PB_SVrefine2Falcon1Dovetail_8717:HG4_PB_SVrefine2PBcRDovetail_7159:HG4_PB_pbsv_14306;NumExactMatchSVs=29;ClusterMaxShiftDist=0.086262;ClusterMaxSizeDiff=0.086262;ClusterMaxEditDist=0.086262;PBcalls=17;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=15521;DistForward=123513;DistMin=15521;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=13:96633423-96633754;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1015.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:75:1/1:0:35:0:37:1/1:0:18:0:19:1/1:0:44:./.:2:13:.:.:.
chr13	98721236	HG2_Ill_manta_3972	CCCTTCTGCTTGATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_1588:HG4_Ill_Krunchall_19839:HG3_Ill_Krunchall_19123:HG2_Ill_Krunchall_19505:HG3_PB_HySA_21625:HG2_PB_HySA_26164:HG2_PB_pbsv_14349:HG4_PB_pbsv_14313:HG4_PB_SVrefine2Falcon1Dovetail_8722:HG4_Ill_svaba_17924:HG4_Ill_scalpel_13249:HG4_Ill_manta_3379:HG4_Ill_SVrefine2DISCOVARDovetail_10161:HG4_10X_allpass_2674:HG3_PB_pbsv_14008:HG3_PB_SVrefine2PBcRDovetail_6761:HG3_PB_SVrefine2Falcon1Dovetail_8675:HG3_Ill_svaba_18043:HG3_Ill_scalpel_13805:HG3_Ill_manta_3243:HG3_Ill_SVrefine2DISCOVARDovetail_10298:HG3_Ill_GATKHCSBGrefine_9466:HG3_10X_allpass_2777:HG2_PB_SVrefine2PBcRplusDovetail_2973:HG2_PB_SVrefine2PB10Xhap12_10349:HG2_PB_SVrefine2Falcon1plusDovetail_3157:HG2_Ill_svaba_17884:HG2_Ill_scalpel_13546:HG2_Ill_manta_3972:HG2_Ill_SVrefine2DISCOVARplusDovetail_3513:HG2_Ill_GATKHCSBGrefine_9568:HG2_10X_allpass_2281:HG2_10X_SVrefine210Xhap12_9963:HG2_Ill_breakscan11_2035:HG4_PB_HySA_20884:HG4_Ill_MetaSV_1423:HG3_Ill_MetaSV_1458:HG2_PB_SVrefine2Falcon2Bionano_7134;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9963:HG2_10X_allpass_2281:HG2_Ill_GATKHCSBGrefine_9568:HG2_Ill_SVrefine2DISCOVARplusDovetail_3513:HG2_Ill_manta_3972:HG2_Ill_scalpel_13546:HG2_Ill_svaba_17884:HG2_PB_SVrefine2Falcon1plusDovetail_3157:HG2_PB_SVrefine2PB10Xhap12_10349:HG2_PB_SVrefine2PBcRplusDovetail_2973:HG3_10X_allpass_2777:HG3_Ill_GATKHCSBGrefine_9466:HG3_Ill_SVrefine2DISCOVARDovetail_10298:HG3_Ill_manta_3243:HG3_Ill_scalpel_13805:HG3_Ill_svaba_18043:HG3_PB_SVrefine2Falcon1Dovetail_8675:HG3_PB_SVrefine2PBcRDovetail_6761:HG3_PB_pbsv_14008:HG4_10X_allpass_2674:HG4_Ill_SVrefine2DISCOVARDovetail_10161:HG4_Ill_manta_3379:HG4_Ill_scalpel_13249:HG4_Ill_svaba_17924:HG4_PB_SVrefine2Falcon1Dovetail_8722;NumExactMatchSVs=25;ClusterMaxShiftDist=0.00623053;ClusterMaxSizeDiff=0.00623053;ClusterMaxEditDist=0.00625;PBcalls=13;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-321;DistForward=-307;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=13:98721237-98721570;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1016.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:40:1/1:1:20:1:21:1/1:0:16:0:14:1/1:0:36:0/1:3:7:.:.:.
chr13	99623702	HG2_10X_allpass_2282	CTGTAGTCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCACGAAATCAGGACATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAAATACAAAAAACTAGCCGGGTGTTGTGGTGGGTGCT	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_955:HG4_PB_pbsv_14325:HG2_PB_HySA_26181:HG4_Ill_svaba_17936:HG4_Ill_scalpel_13255:HG4_Ill_SVrefine2DISCOVARDovetail_10167:HG4_Ill_MetaSV_1425:HG4_Ill_GATKHCSBGrefine_9875:HG4_10X_allpass_2675:HG2_PB_pbsv_14361:HG2_PB_assemblyticsfalcon_7369:HG2_PB_SVrefine2PBcRplusDovetail_2983:HG2_PB_SVrefine2PB10Xhap12_10360:HG2_PB_SVrefine2Falcon2Bionano_7144:HG2_PB_SVrefine2Falcon1plusDovetail_3167:HG2_Ill_svaba_17898:HG2_Ill_scalpel_13556:HG2_Ill_SpiralSDKrefine_4586:HG2_Ill_SVrefine2DISCOVARplusDovetail_3518:HG2_Ill_MetaSV_1342:HG2_Ill_GATKHCSBGrefine_9574:HG2_10X_allpass_2282:HG2_10X_SVrefine210Xhap12_9966;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9966:HG2_10X_allpass_2282:HG2_Ill_GATKHCSBGrefine_9574:HG2_Ill_MetaSV_1342:HG2_Ill_SVrefine2DISCOVARplusDovetail_3518:HG2_Ill_SpiralSDKrefine_4586:HG2_Ill_scalpel_13556:HG2_Ill_svaba_17898:HG2_PB_SVrefine2Falcon1plusDovetail_3167:HG2_PB_SVrefine2Falcon2Bionano_7144:HG2_PB_SVrefine2PB10Xhap12_10360:HG2_PB_SVrefine2PBcRplusDovetail_2983:HG2_PB_assemblyticsfalcon_7369:HG2_PB_pbsv_14361:HG4_10X_allpass_2675:HG4_Ill_GATKHCSBGrefine_9875:HG4_Ill_MetaSV_1425:HG4_Ill_SVrefine2DISCOVARDovetail_10167:HG4_Ill_scalpel_13255:HG4_Ill_svaba_17936;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0147059;ClusterMaxSizeDiff=0.0147059;ClusterMaxEditDist=0.0147059;PBcalls=8;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-135;DistBack=-108;DistForward=-113;DistMin=-113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=24;REFWIDENED=13:99623703-99623861;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1017.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:39:0|1:43:1:1:36:1|0:0:24:17:0:0/1:38:31:./.:.:.:.:.:.
chr13	99678264	HG2_PB_SVrefine2PB10Xhap12_10362	TAACAGTTCCCTAGGGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_1114:HG2_PB_pbsv_14362:HG2_PB_HySA_26182:HG4_PB_HySA_20902:HG4_Ill_svaba_17937:HG4_Ill_manta_3382:HG4_Ill_SVrefine2DISCOVARDovetail_10168:HG4_Ill_Krunchall_19851:HG4_Ill_GATKHC_22891:HG4_Ill_GATKHCSBGrefine_9876:HG4_Ill_250bpfermikitraw_18914:HG4_Ill_150bpfermikitraw_18212:HG2_PB_SVrefine2PBcRplusDovetail_2984:HG2_PB_SVrefine2PB10Xhap12_10362:HG2_PB_SVrefine2Falcon2Bionano_7145:HG2_PB_SVrefine2Falcon1plusDovetail_3168:HG2_Ill_svaba_17899:HG2_Ill_scalpel_13557:HG2_Ill_breakscan11_2036:HG2_Ill_SpiralSDKrefine_4587:HG2_Ill_SVrefine2DISCOVARplusDovetail_3519:HG2_Ill_Krunchall_19517:HG2_Ill_GATKHC_22929:HG2_Ill_GATKHCSBGrefine_9575:HG2_Ill_250bpfermikitraw_19175:HG2_Ill_150bpfermikitraw_18088:HG2_10X_allpass_2283:HG2_10X_SVrefine210Xhap12_9967:HG4_PB_pbsv_14326;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9967:HG2_10X_allpass_2283:HG2_Ill_150bpfermikitraw_18088:HG2_Ill_250bpfermikitraw_19175:HG2_Ill_GATKHCSBGrefine_9575:HG2_Ill_GATKHC_22929:HG2_Ill_Krunchall_19517:HG2_Ill_SVrefine2DISCOVARplusDovetail_3519:HG2_Ill_SpiralSDKrefine_4587:HG2_Ill_breakscan11_2036:HG2_Ill_scalpel_13557:HG2_Ill_svaba_17899:HG2_PB_SVrefine2Falcon1plusDovetail_3168:HG2_PB_SVrefine2Falcon2Bionano_7145:HG2_PB_SVrefine2PB10Xhap12_10362:HG2_PB_SVrefine2PBcRplusDovetail_2984:HG4_Ill_150bpfermikitraw_18212:HG4_Ill_250bpfermikitraw_18914:HG4_Ill_GATKHCSBGrefine_9876:HG4_Ill_GATKHC_22891:HG4_Ill_Krunchall_19851:HG4_Ill_SVrefine2DISCOVARDovetail_10168:HG4_Ill_manta_3382:HG4_Ill_svaba_17937:HG4_PB_HySA_20902;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0227273;ClusterMaxSizeDiff=0.0227273;ClusterMaxEditDist=0.0229885;PBcalls=8;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-87;DistBack=53587;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=13:99678265-99678367;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1018.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:50:0|1:46:0:1:42:1|0:0:16:27:2:0/1:24:25:./.:.:.:.:.:.
chr13	101625773	HG2_Ill_scalpel_13565	ATATATATTATATATATAATATATAATACATATGTATTATATATACATATGTATATATATAATATATACATATATATAATATATATAATACATATGTAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9974:HG3_Ill_Krunchall_19146:HG2_PB_assemblyticsfalcon_7393:HG2_PB_SVrefine2Falcon1plusDovetail_3178:HG2_PB_pbsv_14372:HG3_PB_pbsv_14026:HG4_PB_SVrefine2Falcon1Dovetail_8739:HG3_PB_SVrefine2Falcon1Dovetail_8691:HG4_PB_pbsv_14336:HG4_Ill_svaba_17946:HG4_Ill_SVrefine2DISCOVARDovetail_10175:HG4_Ill_Krunchall_19865:HG4_Ill_GATKHC_22908:HG4_Ill_GATKHCSBGrefine_9880:HG4_Ill_250bpfermikitraw_18928:HG3_PB_SVrefine2PBcRDovetail_6772:HG3_Ill_svaba_18068:HG3_Ill_scalpel_13821:HG3_Ill_SVrefine2DISCOVARDovetail_10307:HG3_Ill_Krunchall_19145:HG3_Ill_GATKHC_22839:HG3_Ill_GATKHCSBGrefine_9472:HG3_Ill_250bpfermikitraw_18632:HG2_PB_SVrefine2PBcRplusDovetail_2991:HG2_PB_SVrefine2PB10Xhap12_10370:HG2_PB_SVrefine2Falcon2Bionano_7153:HG2_Ill_svaba_17908:HG2_Ill_scalpel_13565:HG2_Ill_manta_3976:HG2_Ill_SpiralSDKrefine_4593:HG2_Ill_SVrefine2DISCOVARplusDovetail_3527:HG2_Ill_Krunchall_19527:HG2_Ill_GATKHC_22943:HG2_Ill_GATKHCSBGrefine_9579:HG2_Ill_250bpfermikitraw_19188:HG2_Ill_150bpfermikitraw_18100:HG2_10X_allpass_2284;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9974:HG4_PB_pbsv_14336:HG4_Ill_svaba_17946:HG4_Ill_SVrefine2DISCOVARDovetail_10175:HG4_Ill_Krunchall_19865:HG4_Ill_GATKHC_22908:HG4_Ill_GATKHCSBGrefine_9880:HG4_Ill_250bpfermikitraw_18928:HG3_PB_SVrefine2PBcRDovetail_6772:HG3_Ill_svaba_18068:HG3_Ill_scalpel_13821:HG3_Ill_SVrefine2DISCOVARDovetail_10307:HG3_Ill_Krunchall_19145:HG3_Ill_GATKHC_22839:HG3_Ill_GATKHCSBGrefine_9472:HG3_Ill_250bpfermikitraw_18632:HG2_PB_SVrefine2PBcRplusDovetail_2991:HG2_PB_SVrefine2PB10Xhap12_10370:HG2_PB_SVrefine2Falcon2Bionano_7153:HG2_Ill_svaba_17908:HG2_Ill_scalpel_13565:HG2_Ill_manta_3976:HG2_Ill_SpiralSDKrefine_4593:HG2_Ill_SVrefine2DISCOVARplusDovetail_3527:HG2_Ill_Krunchall_19527:HG2_Ill_GATKHC_22943:HG2_Ill_GATKHCSBGrefine_9579:HG2_Ill_250bpfermikitraw_19188:HG2_Ill_150bpfermikitraw_18100:HG2_10X_allpass_2284;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.0606061;PBcalls=11;Illcalls=24;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=23;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-98;DistBack=30;DistForward=-74;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=24;REFWIDENED=13:101625774-101625895;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1019.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:62:1/1:4:20:2:23:1/1:2:55:0:33:1/1:0:35:./.:.:.:.:.:.
chr13	101629075	HG2_Ill_250bpfermikitraw_19189	CGCCTTAAGAGCTGTAACACTCACTGTGAAGGTCCGCAGCTTCACTCCTGAAGCCAGCGAGACCATGAGTCCACCGTGAGGAAGAACAACTCCAGACGTGCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9975:HG2_PB_HySA_26202:HG2_Ill_Krunchall_19528:HG4_PB_pbsv_14337:HG2_PB_pbsv_14373:HG3_PB_pbsv_14027:HG3_Ill_MetaSV_1460:HG2_Ill_MetaSV_1346:HG4_Ill_svaba_17947:HG3_Ill_GATKHCSBGrefine_9473:HG2_PB_assemblyticsfalcon_7394:HG2_PB_SVrefine2Falcon1plusDovetail_3179:HG2_Ill_svaba_17909:HG2_Ill_SpiralSDKrefine_4594:HG2_Ill_GATKHCSBGrefine_9580:HG2_Ill_250bpfermikitraw_19189:HG4_PB_SVrefine2Falcon1Dovetail_8740:HG3_PB_SVrefine2Falcon1Dovetail_8692:HG2_PB_SVrefine2PBcRplusDovetail_2992:HG2_PB_SVrefine2PB10Xhap12_10371:HG2_PB_SVrefine2Falcon2Bionano_7154:HG2_Ill_SVrefine2DISCOVARplusDovetail_3528;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19189:HG2_Ill_GATKHCSBGrefine_9580:HG2_Ill_SpiralSDKrefine_4594:HG2_Ill_svaba_17909:HG2_PB_SVrefine2Falcon1plusDovetail_3179:HG2_PB_assemblyticsfalcon_7394:HG3_Ill_GATKHCSBGrefine_9473:HG4_Ill_svaba_17947;NumExactMatchSVs=8;ClusterMaxShiftDist=0.039604;ClusterMaxSizeDiff=0.039604;ClusterMaxEditDist=0.109453;PBcalls=11;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=4;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-101;DistBack=3196;DistForward=9498;DistMin=3196;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=182;REFWIDENED=13:101628978-101629260;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1020.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:65:1/1:6:19:1:21:1/1:0:7:0:6:1/1:0:41:./.:.:.:.:.:.
chr13	101894139	HG2_PB_SVrefine2PBcRplusDovetail_2993	GATCCCATCCTTTCCCTCTGAGGGATGGGATTTTTCCTTCCTGATGTTATGTGGGGCCTCTCTTCTGCCTCTTCACTTTGCACAGGCCTCTAGTCACTTCCATCCTGGACACACTCCTGAAAACTGCAAGTTCTGGTCACAAGGATTTGCAAATGTCCTCAGGGCAGCCACTGCCTTGGGGCCCACCTGGTATTCTGGACTCACGTCACATTTAATTTTTGGCCTCAAGAATTTTCCTTAATTTTTTGCACACTCTGCTGAACATTTAAAACGTCTTAATATTTTAAGTGTTTGGTAGAAATGATTTTTAGTTACCTTGCAGGGCCACTTTGTATGTGCTTCCTATAAGCAGTGTACAATTTTTATTTTGTGTTTAAACATACTCAGATTTTCTAGGGTTTTTGATAAGAAAATTCAACCTGCTCAAACAAAATGTGCCAAAGTTATACTTGGTCTTACGCTTCCTGTGTATTTTATGTCATTGCTGTTTCATTTTTAACCTTATCTTGTCTTTTTTTAACTTGGTCAACTATTTGCTAATTTCTTTCCCTATTCATTAATTTGGACGCTCGACTTGGTTTTTCTAATCTCCTGGCTTAATTCTCAATGGTTAGACATCAAACCAATGCTTTTTTCTTATTGCTTCACAACTAAATTGCTGGCTCACTCATCCCTCCACCCCACACATCTGCAAACTTCATAGTACACTTCTACCATCCCACTCTCCTTTGATATCACACCCTTTCCTAAGTCCTGGTTTTGCTGAAATCATTTACAAATTTATTACTAGTTTCTTTAATGTTATCATTTCTCTTTTTTCAAAGATCCCTATTTGACATATTTATTATTATCTATTGAGATCCAATGCCCATCAATTCTCTCTTCTTTTGTCTAGTCATTGAGATTGCAATTTACTTATCTTGTGATTAGCACACTTTAAAGTAGTTTTCTCAAATAAATACAAAGGGTTTTATGCTCTCTTAGTCCTTTTGTATATAAAATGCATTTTTAACACTGACAGATGAACATGTTGTCTGTGTTCAGATTCTGTAGTTGCAGTTCTATTCTCTCAGTAGTCTATGTATATTGATTCATTACCTTCCACTTTCCAGTATTGTAGATGAGTCATCCATTGCACAATACATTTATTTTACTTTTTCAGGTTTAGGTTCAGCCTGTTTAGGGGCTGAACAAGGTTACTTCTTTATGCTTGCAACCTAGGAAGGTCACCAGGACATGAGTAAGCATCTATTTTCATTTAATCTCACTAAAATTTAGTGAGCTCTTTCAGTTTGCAGATTTATGTTTTTTTTTTTTTTTCATTTATGTAAGCTTTCTTCCGTTGTTTATGACAACTTTTCTTCTATCTGTTCGCTTTTTCCTTCAGGGACTCCTATTATTCATAGCTGTGTGGATAGGCTATTTTACTTTGCCCTTATTATTATATCTCTACCACTTTTTGAGTTATTTTTTCCTGCTTCATCTCCCATATTAAAAACTAGCTCTCAAGGACTATGCCCTTTTTTAACTCATTTTTTGGACATTTTTAGTTGAAGTTACAGAAATTGTATTTTGTGCCCTGCTTACTTTTTCTTGAGACAACAACAACAACAACAACAACGGATTCTCTCGCCCATCAATTCTACTTGCTTGGGAAATCTCTAGACTAGACATTTGTCTTGATTCTCTGAGTTTCATCCTCAGTTTCTGAGTCTCCCTTTGTGTGTGAGTTAACTTTTCTTTCCTTCACCATGGATACATGTTTTTGATGTAATTGTCGTTTGTCTTTTATGCTATCTTAAGCAGTGGCAAATGAGGGGTAGTAGAGGGCACCATAGTTTACGGAGGCGAAAGACCTGAAAAGCCATAGCTCCTTTGCTGAACATCTGAAGAAGGCTTTTTGGTGACAGGATTTCCCAGAAATGAGTGGAGTCATTTATTGACCCCCTTCTCCACCTGGAGTAATTCAGTCTCTAGTGAGCTTCCCTTCCTGGCCCACTGAGACCCACAGGACTCTGTGGACTGCTCCTGGACCACAAGCAGCATACAGGCAGGTCCAGCTCCTCTGCGGGAAATGAAAGGCTCTCTGCCCTGAGCAGTGGCCTCAGGGGACCAGAGGACTCAGACTTTGCTGCAAGTCCTGCGACAGGTACTTCCTCTCTAGCACAGGCTTCTTAGTTCTGGCCTTGCAATGATATGGGGAAGACTTGAACCTGTTTTCTCTCCTATGGATACTAGGGAATCTCAGGAGAAACTGAAATTGATGTGTCATGAAGGTCCC	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6774:HG4_10X_allpass_2676:HG3_Ill_Krunchall_19148:HG4_Ill_Krunchall_19868:HG2_Ill_Krunchall_19531:HG3_10X_allpass_2780:HG2_10X_allpass_2285:HG4_PB_assemblyticsfalcon_7268:HG3_PB_assemblyticsfalcon_7356:HG2_PB_assemblyticsfalcon_7396:HG2_Ill_MetaSV_1347:HG4_PB_pbsv_14339:HG4_PB_SVrefine2PBcRDovetail_7161:HG4_Ill_MetaSV_1429:HG3_PB_pbsv_14030:HG3_Ill_MetaSV_1461:HG2_PB_pbsv_14374:HG2_PB_assemblyticsPBcR_7125:HG2_PB_SVrefine2PBcRplusDovetail_2994:HG2_Ill_tnscope_1589:HG4_PB_SVrefine2Falcon1Dovetail_8741:HG4_Ill_SVrefine2DISCOVARDovetail_10176:HG3_PB_SVrefine2Falcon1Dovetail_8693:HG3_Ill_SVrefine2DISCOVARDovetail_10310:HG2_PB_SVrefine2PBcRplusDovetail_2993:HG2_PB_SVrefine2PB10Xhap12_10372:HG2_PB_SVrefine2Falcon2Bionano_7155:HG2_PB_SVrefine2Falcon1plusDovetail_3180:HG2_10X_SVrefine210Xhap12_9976;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9976:HG2_PB_SVrefine2Falcon1plusDovetail_3180:HG2_PB_SVrefine2Falcon2Bionano_7155:HG2_PB_SVrefine2PB10Xhap12_10372:HG2_PB_SVrefine2PBcRplusDovetail_2993:HG3_Ill_SVrefine2DISCOVARDovetail_10310:HG3_PB_SVrefine2Falcon1Dovetail_8693:HG4_Ill_SVrefine2DISCOVARDovetail_10176:HG4_PB_SVrefine2Falcon1Dovetail_8741;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0737601;ClusterMaxSizeDiff=0.0737601;ClusterMaxEditDist=0.0737601;PBcalls=16;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2280;DistBack=64378;DistForward=-2276;DistMin=-2276;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=13:101894140-101896423;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.9996;PctRecOverlap=0.9978;SizeDiff=-1;StartDistance=-4;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=1021.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:62:./.:20:30:14:7:1|0:0:29:62:0:0/1:62:11:0/1:202:79:2483:.:.
chr13	101906943	HG3_PB_SVrefine2Falcon1Dovetail_8694	TAAGAATGAATGACATGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_14940:HG2_PB_SVrefine2PB10Xhap12_10374:HG2_PB_PB10Xdip_8160:HG4_PB_assemblyticsfalcon_7269:HG4_PB_pbsv_14340:HG3_Ill_Krunchall_19149:HG2_Ill_Krunchall_19532:HG3_PB_assemblyticsfalcon_7357:HG2_PB_assemblyticsfalcon_7397:HG2_PB_pbsv_14375:HG3_Ill_MetaSV_1462:HG2_Ill_tnscope_1590:HG2_Ill_MetaSV_1348:HG4_PB_SVrefine2Falcon1Dovetail_8742:HG4_Ill_GATKHCSBGrefine_9882:HG3_PB_pbsv_14031:HG3_PB_SVrefine2PBcRDovetail_6775:HG3_PB_SVrefine2Falcon1Dovetail_8694:HG3_Ill_scalpel_13823:HG3_Ill_GATKHCSBGrefine_9476:HG3_10X_allpass_2781:HG2_PB_SVrefine2PB10Xhap12_10373:HG2_PB_SVrefine2Falcon2Bionano_7156:HG2_PB_SVrefine2Falcon1plusDovetail_3181:HG2_Ill_manta_3977:HG2_Ill_GATKHCSBGrefine_9581:HG2_10X_allpass_2286:HG2_10X_SVrefine210Xhap12_9977:HG2_Ill_breakscan11_2037;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9977:HG2_10X_allpass_2286:HG2_Ill_GATKHCSBGrefine_9581:HG2_Ill_manta_3977:HG2_PB_SVrefine2Falcon1plusDovetail_3181:HG2_PB_SVrefine2Falcon2Bionano_7156:HG2_PB_SVrefine2PB10Xhap12_10373:HG3_10X_allpass_2781:HG3_Ill_GATKHCSBGrefine_9476:HG3_Ill_scalpel_13823:HG3_PB_SVrefine2Falcon1Dovetail_8694:HG3_PB_SVrefine2PBcRDovetail_6775:HG3_PB_pbsv_14031:HG4_Ill_GATKHCSBGrefine_9882:HG4_PB_SVrefine2Falcon1Dovetail_8742;NumExactMatchSVs=15;ClusterMaxShiftDist=0.272109;ClusterMaxSizeDiff=0.272109;ClusterMaxEditDist=0.272109;PBcalls=14;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=12796;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=13:101906944-101907279;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1022.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:26:./.:15:8:5:14:1|0:0:26:28:0:0/1:23:16:0/1:28:5:.:.:.
chr13	102790452	HG2_10X_SVrefine210Xhap12_9980	ACTCATCCTTTTCATTGATTGGCAATGAGACCATCATTCTTTTCAGACAAAGCCTTACCCACTTGAAGGATGTGATCTAACTTATGGCCCTAAGACAATAACACAATAGTACAATTTCTATGACAGTCCAGAACAAGTTGCCTGGGAAACATGGAAAACAGTGCAGAGCTGGATCCTGCCATCCAAGGCCAGAGTGGCAACACAGGAGTGGCCCACAGGGAGAGGCAGTGTGGTGAGGTGTCAGTCCATCCAATGCCTCAGCCACCGAGGAGGCCCTCAGTGTCCTGAACAGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9980:HG4_PB_HySA_20932:HG3_PB_HySA_21659:HG4_PB_pbsv_14344:HG4_10X_allpass_2677:HG2_PB_pbsv_14378:HG3_PB_pbsv_14032:HG4_Ill_MetaSV_1431:HG2_Ill_MetaSV_1349:HG4_PB_SVrefine2Falcon1Dovetail_8747:HG4_Ill_SVrefine2DISCOVARDovetail_10181:HG3_PB_SVrefine2PBcRDovetail_6777:HG3_PB_SVrefine2Falcon1Dovetail_8699:HG3_Ill_SVrefine2DISCOVARDovetail_10313:HG2_PB_SVrefine2PBcRplusDovetail_2997:HG2_PB_SVrefine2PB10Xhap12_10377:HG2_PB_SVrefine2Falcon2Bionano_7159:HG2_PB_SVrefine2Falcon1plusDovetail_3182:HG2_Ill_SVrefine2DISCOVARplusDovetail_3534;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9980:HG4_PB_SVrefine2Falcon1Dovetail_8747:HG4_Ill_SVrefine2DISCOVARDovetail_10181:HG3_PB_SVrefine2PBcRDovetail_6777:HG3_PB_SVrefine2Falcon1Dovetail_8699:HG3_Ill_SVrefine2DISCOVARDovetail_10313:HG2_PB_SVrefine2PBcRplusDovetail_2997:HG2_PB_SVrefine2PB10Xhap12_10377:HG2_PB_SVrefine2Falcon2Bionano_7159:HG2_PB_SVrefine2Falcon1plusDovetail_3182:HG2_Ill_SVrefine2DISCOVARplusDovetail_3534;NumExactMatchSVs=11;ClusterMaxShiftDist=0.176101;ClusterMaxSizeDiff=0.176101;ClusterMaxEditDist=0.176101;PBcalls=12;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-292;DistBack=9850;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=292;REFWIDENED=13:102790453-102791036;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1023.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:66:1/1:2:27:1:26:./.:0:1:0:1:1/1:0:11:./.:.:.:.:.:.
chr13	104091764	HG2_10X_allpass_2287	TTGCTGTTATATGTGATTATGATTGTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGGTGTGGTGGGTAGTGGCAAAGACATCCTTATACTCTATTTTCAACTACATATTTGTAATTGGAAGATACTCTTTTGCCTTCTCTTTCAACACAAAAAATAACCCCTTTTCTGAGAATATTTTCTTTAGCTATCTTTCCAATCTATCTATTTCTCCTCTGTGCAGTTAGGAGAATGCATTGATCCGAGTATCCCTTCCAGTTCTGAAACTCTGATTCCATTGCTATCTGTTGAACTGCCTCCAAGCTGTCCCTGTGCCTTTGAAGTTTATGGCCACAGTTATGGCATCAAATCACAGAAATGATGAAGGCTGACCCAGCATTCTATGCTATTTTCAAAGAGTGGATCATGGCTGTTTTATAATGAACGTTAAGCCTACCTTCTATTCTGAAGTTAAATGACATTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_14045:HG3_PB_HySA_21673:HG2_PB_HySA_26225:HG4_PB_pbsv_14349:HG4_Ill_Krunchall_19891:HG3_Ill_Krunchall_19174:HG2_Ill_Krunchall_19552:HG4_PB_assemblyticsfalcon_7286:HG4_PB_SVrefine2Falcon1Dovetail_8753:HG4_Ill_manta_3387:HG4_Ill_SVrefine2DISCOVARDovetail_10188:HG4_Ill_GATKHCSBGrefine_9895:HG4_10X_allpass_2679:HG3_PB_SVrefine2PBcRDovetail_6784:HG3_PB_SVrefine2Falcon1Dovetail_8706:HG3_Ill_manta_3252:HG3_Ill_SVrefine2DISCOVARDovetail_10322:HG3_Ill_GATKHCSBGrefine_9486:HG3_10X_allpass_2786:HG2_PB_assemblyticsPBcR_7141:HG2_PB_SVrefine2PBcRplusDovetail_3003:HG2_PB_SVrefine2PB10Xhap12_10383:HG2_PB_SVrefine2Falcon1plusDovetail_3190:HG2_Ill_manta_3981:HG2_Ill_SpiralSDKrefine_4608:HG2_Ill_SVrefine2DISCOVARplusDovetail_3541:HG2_Ill_GATKHCSBGrefine_9589:HG2_10X_allpass_2287:HG2_10X_SVrefine210Xhap12_9990:HG3_PB_assemblyticsfalcon_7374:HG2_PB_assemblyticsfalcon_7412:HG4_Ill_Spiral_1116:HG4_Ill_MetaSV_1433:HG3_Ill_Spiral_14958:HG3_Ill_MetaSV_1465:HG2_Ill_tnscope_1591:HG2_Ill_Spiral_957:HG2_Ill_MetaSV_1352:HG2_Ill_breakscan11_2038:HG2_PB_pbsv_14385;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9990:HG2_10X_allpass_2287:HG2_Ill_GATKHCSBGrefine_9589:HG2_Ill_SVrefine2DISCOVARplusDovetail_3541:HG2_Ill_SpiralSDKrefine_4608:HG2_Ill_manta_3981:HG2_PB_SVrefine2Falcon1plusDovetail_3190:HG2_PB_SVrefine2PB10Xhap12_10383:HG2_PB_SVrefine2PBcRplusDovetail_3003:HG2_PB_assemblyticsPBcR_7141:HG3_10X_allpass_2786:HG3_Ill_GATKHCSBGrefine_9486:HG3_Ill_SVrefine2DISCOVARDovetail_10322:HG3_Ill_manta_3252:HG3_PB_SVrefine2Falcon1Dovetail_8706:HG3_PB_SVrefine2PBcRDovetail_6784:HG4_10X_allpass_2679:HG4_Ill_GATKHCSBGrefine_9895:HG4_Ill_SVrefine2DISCOVARDovetail_10188:HG4_Ill_manta_3387:HG4_PB_SVrefine2Falcon1Dovetail_8753:HG4_PB_assemblyticsfalcon_7286;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0145682;ClusterMaxSizeDiff=0.0145682;ClusterMaxEditDist=0.03125;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-482;DistBack=-483;DistForward=-482;DistMin=-483;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=13:104091765-104092247;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1024.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:1/1:0:23:0:32:1/1:0:26:0:23:1/1:0:32:1/1:1:22:.:.:.
chr13	104144377	HG2_PB_pbsv_14386	TCCATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_14350:HG4_PB_assemblyticsfalcon_7287:HG2_PB_assemblyticsPBcR_7143:HG3_PB_assemblyticsfalcon_7375:HG2_PB_assemblyticsfalcon_7414:HG3_Ill_Krunchall_19176:HG2_Ill_Krunchall_19554:HG4_Ill_Spiral_1117:HG3_PB_HySA_21675:HG3_Ill_Spiral_14959:HG2_PB_HySA_26227:HG2_Ill_Spiral_958:HG4_Ill_MetaSV_1435:HG3_Ill_MetaSV_1466:HG2_Ill_tnscope_1592:HG2_Ill_MetaSV_1353:HG4_PB_SVrefine2Falcon1Dovetail_8754:HG4_Ill_scalpel_13283:HG4_Ill_manta_3388:HG4_Ill_SVrefine2DISCOVARDovetail_10190:HG4_Ill_GATKHCSBGrefine_9896:HG3_PB_pbsv_14046:HG3_PB_SVrefine2PBcRDovetail_6785:HG3_PB_SVrefine2Falcon1Dovetail_8707:HG3_Ill_scalpel_13843:HG3_Ill_manta_3253:HG3_Ill_SVrefine2DISCOVARDovetail_10323:HG3_Ill_GATKHCSBGrefine_9487:HG3_10X_allpass_2787:HG2_PB_pbsv_14386:HG2_PB_SVrefine2PBcRplusDovetail_3004:HG2_PB_SVrefine2PB10Xhap12_10384:HG2_PB_SVrefine2Falcon2Bionano_7164:HG2_PB_SVrefine2Falcon1plusDovetail_3191:HG2_Ill_scalpel_13584:HG2_Ill_manta_3982:HG2_Ill_breakscan11_2040:HG2_Ill_SVrefine2DISCOVARplusDovetail_3543:HG2_Ill_GATKHCSBGrefine_9590:HG2_10X_SVrefine210Xhap12_9991;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9991:HG2_Ill_GATKHCSBGrefine_9590:HG2_Ill_SVrefine2DISCOVARplusDovetail_3543:HG2_Ill_breakscan11_2040:HG2_Ill_manta_3982:HG2_Ill_scalpel_13584:HG2_PB_SVrefine2Falcon1plusDovetail_3191:HG2_PB_SVrefine2Falcon2Bionano_7164:HG2_PB_SVrefine2PB10Xhap12_10384:HG2_PB_SVrefine2PBcRplusDovetail_3004:HG2_PB_pbsv_14386:HG3_10X_allpass_2787:HG3_Ill_GATKHCSBGrefine_9487:HG3_Ill_SVrefine2DISCOVARDovetail_10323:HG3_Ill_manta_3253:HG3_Ill_scalpel_13843:HG3_PB_SVrefine2Falcon1Dovetail_8707:HG3_PB_SVrefine2PBcRDovetail_6785:HG3_PB_pbsv_14046:HG4_Ill_GATKHCSBGrefine_9896:HG4_Ill_SVrefine2DISCOVARDovetail_10190:HG4_Ill_manta_3388:HG4_Ill_scalpel_13283:HG4_PB_SVrefine2Falcon1Dovetail_8754;NumExactMatchSVs=24;ClusterMaxShiftDist=0.127042;ClusterMaxSizeDiff=0.127042;ClusterMaxEditDist=0.130672;PBcalls=16;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-283;DistBack=26018;DistForward=2119;DistMin=2119;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=13:104144378-104144678;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1025.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:78:./.:0:1:0:2:1/1:0:18:0:13:1/1:0:35:./.:.:.:.:.:.
chr13	105161209	HG2_PB_SVrefine2Falcon2Bionano_7169	TAAAAGATCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_1438:HG3_PB_HySA_21688:HG4_Ill_Krunchall_19900:HG3_Ill_Krunchall_19183:HG2_Ill_Krunchall_19558:HG3_PB_assemblyticsfalcon_7382:HG2_PB_assemblyticsfalcon_7422:HG4_PB_assemblyticsfalcon_7293:HG2_PB_assemblyticsPBcR_7149:HG4_Ill_Spiral_1118:HG2_PB_HySA_26233:HG2_Ill_Spiral_959:HG3_Ill_Krunchall_19182:HG4_PB_pbsv_14355:HG2_PB_pbsv_14390:HG2_Ill_tnscope_1593:HG2_Ill_MetaSV_1356:HG4_PB_SVrefine2PBcRDovetail_7164:HG4_PB_SVrefine2Falcon1Dovetail_8758:HG4_Ill_scalpel_13287:HG4_Ill_manta_3390:HG4_Ill_SVrefine2DISCOVARDovetail_10197:HG4_Ill_GATKHCSBGrefine_9897:HG3_PB_pbsv_14051:HG3_PB_SVrefine2PBcRDovetail_6790:HG3_PB_SVrefine2Falcon1Dovetail_8712:HG3_Ill_scalpel_13847:HG3_Ill_manta_3255:HG3_Ill_SVrefine2DISCOVARDovetail_10328:HG3_Ill_MetaSV_1470:HG3_Ill_GATKHCSBGrefine_9488:HG3_10X_allpass_2789:HG2_PB_SVrefine2PBcRplusDovetail_3009:HG2_PB_SVrefine2PB10Xhap12_10389:HG2_PB_SVrefine2Falcon2Bionano_7169:HG2_PB_SVrefine2Falcon1plusDovetail_3195:HG2_Ill_scalpel_13588:HG2_Ill_manta_3984:HG2_Ill_SVrefine2DISCOVARplusDovetail_3548:HG2_Ill_GATKHCSBGrefine_9591:HG2_10X_SVrefine210Xhap12_9997:HG2_Ill_breakscan11_2041:HG3_Ill_Spiral_14965;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_9997:HG2_Ill_GATKHCSBGrefine_9591:HG2_Ill_SVrefine2DISCOVARplusDovetail_3548:HG2_Ill_manta_3984:HG2_Ill_scalpel_13588:HG2_PB_SVrefine2Falcon1plusDovetail_3195:HG2_PB_SVrefine2Falcon2Bionano_7169:HG2_PB_SVrefine2PB10Xhap12_10389:HG2_PB_SVrefine2PBcRplusDovetail_3009:HG3_10X_allpass_2789:HG3_Ill_GATKHCSBGrefine_9488:HG3_Ill_MetaSV_1470:HG3_Ill_SVrefine2DISCOVARDovetail_10328:HG3_Ill_manta_3255:HG3_Ill_scalpel_13847:HG3_PB_SVrefine2Falcon1Dovetail_8712:HG3_PB_SVrefine2PBcRDovetail_6790:HG3_PB_pbsv_14051:HG4_Ill_GATKHCSBGrefine_9897:HG4_Ill_SVrefine2DISCOVARDovetail_10197:HG4_Ill_manta_3390:HG4_Ill_scalpel_13287:HG4_PB_SVrefine2Falcon1Dovetail_8758:HG4_PB_SVrefine2PBcRDovetail_7164;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0987261;ClusterMaxSizeDiff=0.0987261;ClusterMaxEditDist=0.0987261;PBcalls=17;Illcalls=24;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=14;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=-443;DistForward=-302;DistMin=-443;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=13:105161210-105161535;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1026.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:./.:0:2:0:1:1/1:0:11:0:11:1/1:0:48:./.:1:9:.:.:.
chr13	105306332	HG2_PB_SVrefine2Falcon1plusDovetail_3199	GCTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCTTGACTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCTTGACTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCTTGAATCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCTTGAATCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCTTGACTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCCTGACTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCTTGACTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCTTGACTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCTTGACTCACTGGAATGATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCCTGACTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCCTGACTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCTTGACTCACTGGAATCATCGAGATTCTAACTGGAGATCTGGTCTGTGCTTCTTCTCCTGA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7172:HG3_PB_SVrefine2PBcRDovetail_6793:HG3_PB_pbsv_14056:HG2_PB_pbsv_14393:HG4_PB_SVrefine2Falcon1Dovetail_8761:HG4_Ill_SVrefine2DISCOVARDovetail_10199:HG3_PB_SVrefine2Falcon1Dovetail_8716:HG3_Ill_SVrefine2DISCOVARDovetail_10331:HG2_PB_SVrefine2Falcon1plusDovetail_3199;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3199:HG3_Ill_SVrefine2DISCOVARDovetail_10331:HG3_PB_SVrefine2Falcon1Dovetail_8716:HG4_Ill_SVrefine2DISCOVARDovetail_10199:HG4_PB_SVrefine2Falcon1Dovetail_8761;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0727995;ClusterMaxSizeDiff=0.0727995;ClusterMaxEditDist=0.0807947;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-728;DistBack=21404;DistForward=-729;DistMin=-729;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=392;REFWIDENED=13:105306333-105307452;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1027.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:30:./.:8:20:22:6:./.:0:0:0:2:./.:1:4:0/1:7:12:.:.:.
chr13	105420719	HG3_PB_SVrefine2Falcon1Dovetail_8718	TGGAACTCAGTATTCTGTTAACAGTAGCTTCAGGCAATTCTGAAGAATGCTAAAGTTTGAGAAACCATACTCTGTGCCATTAATTCAGTAGTTAGGTAAATCTACATAGCTGGTTTCTAATAGTTCAGTCCTCAATTTA	T	20	PASS	ClusterIDs=HG2_10X_allpass_2289:HG2_PB_pbsv_14396:HG4_PB_pbsv_14361:HG2_PB_PB10Xdip_8174:HG4_PB_SVrefine2PBcRDovetail_7169:HG4_PB_SVrefine2Falcon1Dovetail_8763:HG4_PB_HySA_20959:HG4_Ill_SVrefine2DISCOVARDovetail_10201:HG4_Ill_250bpfermikitraw_18970:HG4_Ill_150bpfermikitraw_18265:HG3_PB_SVrefine2Falcon1Dovetail_8718:HG2_PB_SVrefine2PBcRplusDovetail_3013:HG2_PB_SVrefine2PB10Xhap12_10394:HG2_PB_SVrefine2Falcon2Bionano_7174:HG2_PB_SVrefine2Falcon1plusDovetail_3201;NumClusterSVs=15;ExactMatchIDs=HG2_10X_allpass_2289:HG4_PB_SVrefine2PBcRDovetail_7169:HG4_PB_SVrefine2Falcon1Dovetail_8763:HG4_PB_HySA_20959:HG4_Ill_SVrefine2DISCOVARDovetail_10201:HG4_Ill_250bpfermikitraw_18970:HG4_Ill_150bpfermikitraw_18265:HG3_PB_SVrefine2Falcon1Dovetail_8718:HG2_PB_SVrefine2PBcRplusDovetail_3013:HG2_PB_SVrefine2PB10Xhap12_10394:HG2_PB_SVrefine2Falcon2Bionano_7174:HG2_PB_SVrefine2Falcon1plusDovetail_3201;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0361011;ClusterMaxEditDist=0.0509091;PBcalls=11;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-138;DistBack=6271;DistForward=-138;DistMin=-138;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=138;REFWIDENED=13:105420720-105420995;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1028.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:46:0|1:23:0:1:41:./.:0:2:25:0:0/1:30:13:./.:.:.:.:.:.
chr13	106034706	HG2_PB_SVrefine2PB10Xhap12_10397	TACTGCTGTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGTGTAGCTGGGACTACAGGCACGCGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGTCTCGGCCTCCCAAAGTGCTGGTATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10006:HG4_Ill_MetaSV_1442:HG3_PB_HySA_21700:HG4_PB_assemblyticsfalcon_7308:HG2_PB_assemblyticsPBcR_7163:HG3_PB_assemblyticsfalcon_7399:HG2_PB_assemblyticsfalcon_7435:HG2_PB_HySA_26252:HG2_PB_pbsv_14400:HG4_PB_pbsv_14365:HG4_PB_SVrefine2PBcRDovetail_7174:HG4_PB_SVrefine2Falcon1Dovetail_8766:HG4_Ill_GATKHCSBGrefine_9905:HG3_PB_pbsv_14063:HG3_PB_SVrefine2PBcRDovetail_6796:HG3_PB_SVrefine2Falcon1Dovetail_8721:HG3_Ill_MetaSV_1474:HG3_Ill_GATKHCSBGrefine_9497:HG2_PB_SVrefine2PBcRplusDovetail_3016:HG2_PB_SVrefine2PB10Xhap12_10397:HG2_PB_SVrefine2Falcon2Bionano_7178:HG2_PB_SVrefine2Falcon1plusDovetail_3204:HG2_Ill_SVrefine2DISCOVARplusDovetail_3554:HG2_Ill_GATKHCSBGrefine_9599;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10006:HG4_PB_pbsv_14365:HG4_PB_SVrefine2PBcRDovetail_7174:HG4_PB_SVrefine2Falcon1Dovetail_8766:HG4_Ill_GATKHCSBGrefine_9905:HG3_PB_pbsv_14063:HG3_PB_SVrefine2PBcRDovetail_6796:HG3_PB_SVrefine2Falcon1Dovetail_8721:HG3_Ill_MetaSV_1474:HG3_Ill_GATKHCSBGrefine_9497:HG2_PB_SVrefine2PBcRplusDovetail_3016:HG2_PB_SVrefine2PB10Xhap12_10397:HG2_PB_SVrefine2Falcon2Bionano_7178:HG2_PB_SVrefine2Falcon1plusDovetail_3204:HG2_Ill_SVrefine2DISCOVARplusDovetail_3554:HG2_Ill_GATKHCSBGrefine_9599;NumExactMatchSVs=16;ClusterMaxShiftDist=0.161812;ClusterMaxSizeDiff=0.161812;ClusterMaxEditDist=0.161812;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=39710;DistForward=9860;DistMin=9860;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=13:106034707-106035033;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1030.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:1:27:0:17:./.:0:0:0:0:1/1:0:11:./.:2:12:.:.:.
chr13	106250084	HG4_Ill_SVrefine2DISCOVARDovetail_10204	CCTGAGACTGCCATGCTGGTGAGGTCATGTGTAGCTGTTGCCATATCCACTCTGAGACTGCCATGCCGGTGAGGTCATGTGTAGCTGTTGCCATATCCACTCTGAGACTGCCATGCTGGAGAGGTCGTGTGTAGGTGTTGCCATATCCACT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10007:HG2_PB_SVrefine2PB10Xhap12_10400:HG4_Ill_Spiral_1120:HG2_Ill_Spiral_961:HG2_Ill_GATKHCSBGrefine_9601:HG4_Ill_GATKHCSBGrefine_9908:HG3_Ill_GATKHCSBGrefine_9499:HG2_PB_pbsv_14403:HG4_Ill_GATKHC_22958:HG2_Ill_SpiralSDKrefine_4628:HG4_PB_pbsv_14367:HG4_Ill_SVrefine2DISCOVARDovetail_10204:HG2_PB_SVrefine2PBcRplusDovetail_3018;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10007:HG4_Ill_SVrefine2DISCOVARDovetail_10204:HG2_PB_SVrefine2PBcRplusDovetail_3018;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0130719;ClusterMaxSizeDiff=0.0130719;ClusterMaxEditDist=0.0927152;PBcalls=4;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-150;DistBack=39138;DistForward=-82;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=198;REFWIDENED=13:106250085-106250432;PctSeqSimilarity=0.9556;PctSizeSimilarity=1;PctRecOverlap=0.1126;SizeDiff=0;StartDistance=-134;EndDistance=-134;GTMatch=0;TruScore=68;MatchId=1031.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:30:0|1:28:1:1:25:0/0:40:0:20:1:./.:41:4:./.:.:.:.:.:.
chr13	106449324	HG4_PB_SVrefine2PBcRDovetail_7176	TATTTTTGGCAAAAGTAAAAGCAATAATAAATACAAGGACCAGGATACAGGCAGGCGTATATGGTTAGAAAGAGTTTCACTGAGCCAAAAAGCTCTGGAAAGGAGTAAGGGCACCAACTTGCCTTTAAATAATGCTGATCCAAAATTTCTGCTGTAATTAGTCAGACTTGTGGATGATAGGCTAATACTTTGAAAAACATAGAATTTCTGTCAGGCCAAAGTTGAAGCATGCTATATGGATTTAGAAAAAATGCTGTTTTTATTTTTTTAAACTTTCTGGATAATAGCTTTCTTTAGGGTAACATAGTAATTTCTTTAAGCACAAAGTTGTTTTATGACAATATCTTGTTATTGTTGATGTTGGTTTTATTACCACCACTGCTGCCATTGTTATCATTATGTTTGCCATCCTGTACTATTTATTTCAGTTAGTCTTTTATTGAGTTCACATGGAACTTGTTCAGAGTAATGCATTATGGTTAAGTAACTCTATGTATGTTACAGTTTGGGTTGTTGCAATAATCGTATTTATATTCTCAATGATTATCAGATTTATACAGTACACTACTAGAGAAAATAAGAAAACAAAAGGCTGTTT	ATCA	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1363:HG4_Ill_Spiral_1121:HG2_Ill_Spiral_962:HG2_Ill_SpiralSDKrefine_4629:HG2_Ill_tnscope_1595:HG4_PB_assemblyticsfalcon_7311:HG4_PB_SVrefine2PBcRDovetail_7176:HG4_PB_SVrefine2Falcon1Dovetail_8769:HG4_Ill_manta_3394:HG4_Ill_SVrefine2DISCOVARDovetail_10206:HG3_PB_assemblyticsfalcon_7404:HG3_PB_SVrefine2Falcon1Dovetail_8724:HG2_PB_assemblyticsPBcR_7168:HG2_PB_SVrefine2PBcRplusDovetail_3020:HG2_PB_SVrefine2PB10Xhap12_10403:HG2_PB_SVrefine2Falcon1plusDovetail_3207:HG2_Ill_manta_3989:HG2_10X_SVrefine210Xhap12_10008:HG4_10X_allpass_2681:HG2_10X_allpass_2290:HG4_PB_pbsv_14369:HG2_PB_pbsv_14405:HG4_Ill_Krunchall_19918:HG2_PB_SVrefine2PB10Xhap12_10402:HG2_PB_PB10Xdip_8180:HG2_PB_assemblyticsfalcon_7438:HG4_Ill_Krunchall_19917:HG2_Ill_Krunchall_19579:HG4_Ill_MetaSV_1444;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10008:HG2_Ill_manta_3989:HG2_PB_SVrefine2Falcon1plusDovetail_3207:HG2_PB_SVrefine2PB10Xhap12_10403:HG2_PB_SVrefine2PBcRplusDovetail_3020:HG2_PB_assemblyticsPBcR_7168:HG3_PB_SVrefine2Falcon1Dovetail_8724:HG3_PB_assemblyticsfalcon_7404:HG4_Ill_SVrefine2DISCOVARDovetail_10206:HG4_Ill_manta_3394:HG4_PB_SVrefine2Falcon1Dovetail_8769:HG4_PB_SVrefine2PBcRDovetail_7176:HG4_PB_assemblyticsfalcon_7311;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0912;ClusterMaxSizeDiff=0.0912;ClusterMaxEditDist=0.0912;PBcalls=14;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-594;DistBack=-392;DistForward=-203;DistMin=-392;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=13:106449324-106449921;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9966;PctRecOverlap=0.9983;SizeDiff=-2;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1032.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:48:1|0:2:42:25:1:0|1:63:0:0:21:0/1:58:20:0/1:53:17:.:.:.
chr13	107427685	HG3_Ill_250bpfermikitraw_18690	CGTTCACTCTTAGGACCTCATGTCCAGTTCGACTACTCAGCCACCCACCCATT	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2043:HG4_PB_assemblyticsfalcon_7318:HG2_PB_assemblyticsPBcR_7174:HG2_PB_pbsv_14408:HG3_PB_pbsv_14069:HG3_Ill_svaba_18117:HG3_Ill_manta_3258:HG3_Ill_Krunchall_19210:HG3_Ill_GATKHC_22897:HG3_Ill_GATKHCSBGrefine_9501:HG3_Ill_Cortex_1041:HG3_Ill_250bpfermikitraw_18690:HG3_Ill_150bpfermikitraw_18186:HG2_Ill_svaba_17952:HG2_Ill_scalpel_13610:HG2_Ill_manta_3990:HG2_Ill_SpiralSDKrefine_4636:HG2_Ill_Krunchall_19593:HG2_Ill_GATKHC_23003:HG2_Ill_GATKHCSBGrefine_9606:HG2_Ill_Cortex_2404:HG2_Ill_250bpfermikitraw_19245:HG2_Ill_150bpfermikitraw_18154;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18154:HG2_Ill_250bpfermikitraw_19245:HG2_Ill_Cortex_2404:HG2_Ill_GATKHCSBGrefine_9606:HG2_Ill_GATKHC_23003:HG2_Ill_Krunchall_19593:HG2_Ill_SpiralSDKrefine_4636:HG2_Ill_manta_3990:HG2_Ill_scalpel_13610:HG2_Ill_svaba_17952:HG3_Ill_150bpfermikitraw_18186:HG3_Ill_250bpfermikitraw_18690:HG3_Ill_Cortex_1041:HG3_Ill_GATKHCSBGrefine_9501:HG3_Ill_GATKHC_22897:HG3_Ill_Krunchall_19210:HG3_Ill_manta_3258:HG3_Ill_svaba_18117:HG3_PB_pbsv_14069;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0380952;PBcalls=4;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=18007;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=13:107427661-107427764;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1033.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:36:0|1:31:2:1:31:1|0:0:15:13:1:0/1:32:18:./.:.:.:.:.:.
chr13	107924538	HG2_PB_SVrefine2PB10Xhap12_10406	TTAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1366:HG4_PB_assemblyticsfalcon_7322:HG3_PB_assemblyticsfalcon_7419:HG2_PB_assemblyticsfalcon_7451:HG2_PB_assemblyticsPBcR_7179:HG4_Ill_Krunchall_19936:HG3_Ill_Krunchall_19215:HG2_Ill_Krunchall_19597:HG4_PB_HySA_20988:HG3_PB_HySA_21717:HG3_Ill_Spiral_14990:HG2_PB_HySA_26275:HG4_PB_pbsv_14371:HG4_PB_SVrefine2PBcRDovetail_7178:HG4_PB_SVrefine2Falcon1Dovetail_8770:HG4_Ill_scalpel_13310:HG4_Ill_manta_3395:HG4_Ill_SVrefine2DISCOVARDovetail_10210:HG4_Ill_MetaSV_1447:HG4_Ill_GATKHCSBGrefine_9915:HG4_10X_allpass_2682:HG3_PB_pbsv_14070:HG3_PB_SVrefine2PBcRDovetail_6800:HG3_PB_SVrefine2Falcon1Dovetail_8727:HG3_Ill_scalpel_13871:HG3_Ill_manta_3259:HG3_Ill_SVrefine2DISCOVARDovetail_10341:HG3_Ill_GATKHCSBGrefine_9503:HG3_10X_allpass_2795:HG2_PB_pbsv_14411:HG2_PB_SVrefine2PBcRplusDovetail_3022:HG2_PB_SVrefine2PB10Xhap12_10406:HG2_PB_SVrefine2Falcon2Bionano_7185:HG2_PB_SVrefine2Falcon1plusDovetail_3211:HG2_Ill_scalpel_13612:HG2_Ill_manta_3991:HG2_Ill_SVrefine2DISCOVARplusDovetail_3560:HG2_Ill_MetaSV_1367:HG2_Ill_GATKHCSBGrefine_9608:HG2_10X_SVrefine210Xhap12_10013:HG2_Ill_breakscan11_2044:HG4_Ill_MetaSV_1446:HG3_Ill_MetaSV_1476:HG2_Ill_tnscope_1596;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10013:HG2_Ill_GATKHCSBGrefine_9608:HG2_Ill_MetaSV_1367:HG2_Ill_SVrefine2DISCOVARplusDovetail_3560:HG2_Ill_manta_3991:HG2_Ill_scalpel_13612:HG2_PB_SVrefine2Falcon1plusDovetail_3211:HG2_PB_SVrefine2Falcon2Bionano_7185:HG2_PB_SVrefine2PB10Xhap12_10406:HG2_PB_SVrefine2PBcRplusDovetail_3022:HG2_PB_pbsv_14411:HG3_10X_allpass_2795:HG3_Ill_GATKHCSBGrefine_9503:HG3_Ill_SVrefine2DISCOVARDovetail_10341:HG3_Ill_manta_3259:HG3_Ill_scalpel_13871:HG3_PB_SVrefine2Falcon1Dovetail_8727:HG3_PB_SVrefine2PBcRDovetail_6800:HG3_PB_pbsv_14070:HG4_10X_allpass_2682:HG4_Ill_GATKHCSBGrefine_9915:HG4_Ill_MetaSV_1447:HG4_Ill_SVrefine2DISCOVARDovetail_10210:HG4_Ill_manta_3395:HG4_Ill_scalpel_13310:HG4_PB_SVrefine2Falcon1Dovetail_8770:HG4_PB_SVrefine2PBcRDovetail_7178;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.0689655;PBcalls=18;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-819;DistForward=6174;DistMin=-819;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=13:107924539-107924872;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1035.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:72:1/1:0:8:2:51:./.:0:0:0:0:1/1:0:34:0/1:2:8:.:.:.
chr13	108560452	HG2_PB_SVrefine2PB10Xhap12_10408	GGAGACAGAATCTTGCTCTCGTTGCCCAGCCTGGAGTGCAGTGGTGTGATATCGGCTCACTGCAACTTCCACCTCCTGGGTTCAAGCGATCCTCCTGCCTCAGCCTCCCAAACACCTGGGATTACAGGCACTTGCCACCATGTCTGGCTAATTATTGTATTTTTAGTAGAGATGCGGTTTCGCCATTTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATTTGCCCTCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCTGGCACATCCCAAGATTTAACGTGTGGTGAGAGGCCATTCTTAAATTCAATTATAAAGCATGGTTTAATCTAACACATATTTAGGTATTGCATTTTAGTATGAAAATCCTATGTGAAAAAAACACACAACACTTAAGATTCCCAGCTACTTCAAGATTTGGAAACATTTAGCATTAAGCGCCTCTTCCATAGCTTTGAAAATTAAGCTACCCCCAGAGTTTCTCTGAACCCTTTAATCTTATTTTTGTATGCACTCTGCTTCTATGTGTGTGCCCAGGTTGCATTTCTGCTCTGCCTAAGCAGGTCTCAATCATTGTGCCCTTTCCCCAGCCATACTTTGGATATTGTACATCCCTGAGGAGGTGAAAGCTTGCAGGAAGGTCCAATAGAGCAGTGCACAGCCTTCCAAAATCTCCCTGGCCCTCTCCTGCTGCACCGCCGTCTCCAAAGCCTCCAGCTGCCTTCTTTCTGTGTTCAAAAGCCCGGGAAGGGAGTGTGATCTAATCTCTTGCTTCCCTGCTCCCTTTCGAGTGGCTGCCTCTCCTTGTTGGTCATCCTTCTACAATTTTGTTAAAGAAACTATTGTTCCCTGACAGTTGTTGAGCACCAAATTGTAACAAGTTTTGCATAGTGAGCACTTAGGAATTTTGTTGTTGTAGTTGTTATTTATTTATTTTTTT	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1368:HG4_PB_assemblyticsfalcon_7326:HG4_PB_SVrefine2Falcon1Dovetail_8771:HG3_10X_allpass_2797:HG3_PB_pbsv_14074:HG3_Ill_GATKHCSBGrefine_9507:HG2_PB_pbsv_14414:HG2_Ill_manta_3993:HG2_Ill_GATKHCSBGrefine_9612:HG3_PB_SVrefine2Falcon1Dovetail_8728:HG3_Ill_SVrefine2DISCOVARDovetail_10344:HG2_PB_SVrefine2PBcRplusDovetail_3024:HG2_PB_SVrefine2PB10Xhap12_10408:HG2_PB_SVrefine2Falcon1plusDovetail_3212:HG2_Ill_SVrefine2DISCOVARplusDovetail_3562:HG2_10X_SVrefine210Xhap12_10015:HG3_Ill_MetaSV_1477;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10015:HG2_Ill_SVrefine2DISCOVARplusDovetail_3562:HG2_PB_SVrefine2Falcon1plusDovetail_3212:HG2_PB_SVrefine2PB10Xhap12_10408:HG2_PB_SVrefine2PBcRplusDovetail_3024:HG3_Ill_SVrefine2DISCOVARDovetail_10344:HG3_PB_SVrefine2Falcon1Dovetail_8728;NumExactMatchSVs=7;ClusterMaxShiftDist=0.118006;ClusterMaxSizeDiff=0.118006;ClusterMaxEditDist=0.118006;PBcalls=8;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-958;DistBack=3601;DistForward=-881;DistMin=-881;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=280;REFWIDENED=13:108560453-108561690;PctSeqSimilarity=0.9281;PctSizeSimilarity=0.999;PctRecOverlap=0.9208;SizeDiff=1;StartDistance=-76;EndDistance=-75;GTMatch=0;TruScore=94;MatchId=1036.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:25:./.:28:14:5:13:./.:58:3:6:7:0/1:43:13:0/1:82:31:1001:.:.
chr13	108603779	HG4_Ill_250bpfermikitraw_19001	CTTACAAACCTTTAGCTAGACACAAGCGCTGATTGGTGCATTTTTACAGAGTGCTGATTGGCACAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10017:HG2_PB_pbsv_14415:HG4_PB_pbsv_14375:HG4_Ill_svaba_17995:HG4_Ill_manta_3396:HG4_Ill_Krunchall_19942:HG4_Ill_GATKHC_22981:HG4_Ill_GATKHCSBGrefine_9919:HG4_Ill_250bpfermikitraw_19001:HG4_Ill_150bpfermikitraw_18296:HG2_Ill_svaba_17959:HG2_Ill_manta_3994:HG2_Ill_breakscan11_2046:HG2_Ill_Krunchall_19602:HG2_Ill_GATKHC_23015:HG2_Ill_GATKHCSBGrefine_9613:HG2_Ill_250bpfermikitraw_19254:HG2_PB_HySA_26280:HG4_Ill_SVrefine2DISCOVARDovetail_10215:HG2_PB_SVrefine2PBcRplusDovetail_3025:HG2_PB_SVrefine2PB10Xhap12_10409:HG2_PB_SVrefine2Falcon2Bionano_7187:HG2_PB_SVrefine2Falcon1plusDovetail_3213;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19254:HG2_Ill_GATKHCSBGrefine_9613:HG2_Ill_GATKHC_23015:HG2_Ill_Krunchall_19602:HG2_Ill_breakscan11_2046:HG2_Ill_manta_3994:HG2_Ill_svaba_17959:HG4_Ill_150bpfermikitraw_18296:HG4_Ill_250bpfermikitraw_19001:HG4_Ill_GATKHCSBGrefine_9919:HG4_Ill_GATKHC_22981:HG4_Ill_Krunchall_19942:HG4_Ill_manta_3396:HG4_Ill_svaba_17995;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0305344;ClusterMaxSizeDiff=0.0152672;ClusterMaxEditDist=0.10687;PBcalls=7;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-65;DistBack=5342;DistForward=-40;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=77;REFWIDENED=13:108603741-108603882;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1037.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:21:./.:13:21:11:0:./.:1:19:34:2:0/1:18:23:./.:.:.:.:.:.
chr13	109361745	HG4_Ill_MetaSV_1451	GGCACAATCACTGGAGTCCTGTTGCTACACTTGAGTTCTAGCTCCATCATGTACCTACAGCTTCAGGGAACCACGTAATGTAACAGAGCCTCAGCTTCCTTATTAGTAAAAGAAAGAGTGACGATTATAGTGTCTGTATTATAGAGGTGTGGAGGGAATTAAAGTAATTCTTACACGTAAGGTACTCAGTACAGGGTTATACCAAAGATGTTCAACATGTATTCGTTTCATAATTTTCTTCTCAAAATTATTATAAACTAATTATTACACAAATGATATTTTCTTCATTGTATCTTCACATTTAGGTCTCTTACAATTCCAGTTTTTAACCCTTAGCAGAGCCATAGAATTTAGTTCACACTACTATCTTTATATGCGAAGAATAACCTATTTCTCTATTTGGCCAGTAGTCGACTTTGTCTTATTCTTGAGTCCTTACTCATGGTAATGATGGGCAAGCCAGTTAATATCGAGTCTGTGGTTCTAATATGGTTCCATCTTGATCATGCAAACAGCCCTCTCAAAAAAACTGTCCTATCTAGGACAAACAAAACTCAGATTGCCCTTTTCTCACTAGGATGATGCCGGGCTGGATGGAGGAAGAAGCCTTTCTTCCTAGCCTGTTTCTCTGTGATGAAAAGGACCTTCAAAGAGCTTGAGTGTAGCCCTGCTCTCATTCCTGGGCATTCCTGT	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2047:HG2_10X_allpass_2291:HG4_Ill_Krunchall_19949:HG3_Ill_Krunchall_19223:HG2_Ill_Krunchall_19608:HG4_PB_assemblyticsfalcon_7337:HG3_PB_assemblyticsfalcon_7434:HG2_PB_assemblyticsfalcon_7465:HG2_PB_assemblyticsPBcR_7197:HG2_PB_HySA_26296:HG4_PB_pbsv_14385:HG4_PB_SVrefine2Falcon1Dovetail_8779:HG4_Ill_manta_3399:HG4_Ill_SVrefine2DISCOVARDovetail_10219:HG4_Ill_MetaSV_1451:HG4_10X_allpass_2683:HG3_PB_pbsv_14085:HG3_PB_SVrefine2PBcRDovetail_6808:HG3_PB_SVrefine2Falcon1Dovetail_8735:HG3_Ill_manta_3262:HG3_Ill_SVrefine2DISCOVARDovetail_10347:HG3_Ill_MetaSV_1482:HG3_Ill_GATKHCSBGrefine_9512:HG3_10X_allpass_2799:HG2_PB_pbsv_14426:HG2_PB_SVrefine2PBcRplusDovetail_3033:HG2_PB_SVrefine2PB10Xhap12_10417:HG2_PB_SVrefine2Falcon2Bionano_7195:HG2_PB_SVrefine2Falcon1plusDovetail_3220:HG2_Ill_manta_3996:HG2_Ill_SpiralSDKrefine_4643:HG2_Ill_SVrefine2DISCOVARplusDovetail_3568:HG2_Ill_MetaSV_1372:HG2_Ill_GATKHCSBGrefine_9618:HG2_10X_SVrefine210Xhap12_10024:HG4_Ill_Spiral_1122:HG2_Ill_tnscope_1597:HG2_Ill_Spiral_963;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10024:HG2_Ill_GATKHCSBGrefine_9618:HG2_Ill_MetaSV_1372:HG2_Ill_SVrefine2DISCOVARplusDovetail_3568:HG2_Ill_SpiralSDKrefine_4643:HG2_Ill_manta_3996:HG2_PB_SVrefine2Falcon1plusDovetail_3220:HG2_PB_SVrefine2Falcon2Bionano_7195:HG2_PB_SVrefine2PB10Xhap12_10417:HG2_PB_SVrefine2PBcRplusDovetail_3033:HG2_PB_pbsv_14426:HG3_10X_allpass_2799:HG3_Ill_GATKHCSBGrefine_9512:HG3_Ill_MetaSV_1482:HG3_Ill_SVrefine2DISCOVARDovetail_10347:HG3_Ill_manta_3262:HG3_PB_SVrefine2Falcon1Dovetail_8735:HG3_PB_SVrefine2PBcRDovetail_6808:HG3_PB_pbsv_14085:HG4_10X_allpass_2683:HG4_Ill_MetaSV_1451:HG4_Ill_SVrefine2DISCOVARDovetail_10219:HG4_Ill_manta_3399:HG4_PB_SVrefine2Falcon1Dovetail_8779:HG4_PB_pbsv_14385;NumExactMatchSVs=25;ClusterMaxShiftDist=0.00868307;ClusterMaxSizeDiff=0.00868307;ClusterMaxEditDist=0.00868307;PBcalls=15;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-692;DistBack=32040;DistForward=25373;DistMin=25373;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=13:109361746-109362440;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1038.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:1/1:1:44:0:28:1/1:0:24:0:24:1/1:0:28:./.:3:19:.:.:.
chr13	110213190	HG4_Ill_manta_3402	AGGATACATGTATCTGTACATGTATCTGGGATACATGTATCTGTACATGTATCTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10030:HG2_PB_HySA_26323:HG3_PB_pbsv_14096:HG3_PB_HySA_21756:HG2_PB_pbsv_14435:HG4_PB_pbsv_14399:HG4_PB_HySA_21021:HG4_Ill_svaba_18025:HG4_Ill_manta_3402:HG4_Ill_Krunchall_19968:HG4_Ill_GATKHC_23016:HG4_Ill_GATKHCSBGrefine_9934:HG4_Ill_250bpfermikitraw_19030:HG4_Ill_150bpfermikitraw_18327:HG3_Ill_svaba_18151:HG3_Ill_Krunchall_19237:HG2_Ill_svaba_17986:HG2_Ill_manta_3999:HG2_Ill_Krunchall_19628:HG4_PB_SVrefine2PBcRDovetail_7189:HG4_Ill_SVrefine2DISCOVARDovetail_10223:HG2_PB_SVrefine2Falcon2Bionano_7203:HG2_Ill_SVrefine2DISCOVARplusDovetail_3574;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_Krunchall_19628:HG2_Ill_manta_3999:HG2_Ill_svaba_17986:HG3_Ill_Krunchall_19237:HG3_Ill_svaba_18151:HG4_Ill_150bpfermikitraw_18327:HG4_Ill_250bpfermikitraw_19030:HG4_Ill_GATKHCSBGrefine_9934:HG4_Ill_GATKHC_23016:HG4_Ill_Krunchall_19968:HG4_Ill_manta_3402:HG4_Ill_svaba_18025;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.037037;PBcalls=8;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-54;DistBack=9;DistForward=8257;DistMin=9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=62;REFWIDENED=13:110213167-110213282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1039.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:21:0|1:48:4:3:18:1|0:0:13:26:0:0/1:25:21:./.:.:.:.:.:.
chr13	110743456	HG4_Ill_SVrefine2DISCOVARDovetail_10225	GCGTGGAGGGTTAGAACACAGCTGACCAGGGAGACTCTGGGATCTCCTGTCTTCTTTTAAGTTTTTATTTATTTAGTTTTGAGTGGAGTAATCACACTCAGTGAAAGAGG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3578:HG2_10X_SVrefine210Xhap12_10035:HG2_PB_pbsv_14441:HG4_PB_pbsv_14405:HG4_Ill_GATKHC_23029:HG4_Ill_GATKHCSBGrefine_9938:HG2_Ill_GATKHC_23061:HG2_Ill_GATKHCSBGrefine_9631:HG4_PB_SVrefine2PBcRDovetail_7193:HG4_Ill_SVrefine2DISCOVARDovetail_10225:HG2_PB_assemblyticsPBcR_7221:HG2_PB_SVrefine2PBcRplusDovetail_3041:HG2_PB_SVrefine2PB10Xhap12_10429;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3578:HG4_PB_SVrefine2PBcRDovetail_7193:HG4_Ill_SVrefine2DISCOVARDovetail_10225:HG2_PB_assemblyticsPBcR_7221:HG2_PB_SVrefine2PBcRplusDovetail_3041:HG2_PB_SVrefine2PB10Xhap12_10429;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0913242;ClusterMaxSizeDiff=0.0913242;ClusterMaxEditDist=0.150235;PBcalls=6;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-109;DistBack=2009;DistForward=-109;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=218;REFWIDENED=13:110743322-110743648;PctSeqSimilarity=0.9947;PctSizeSimilarity=1;PctRecOverlap=0.6091;SizeDiff=0;StartDistance=43;EndDistance=43;GTMatch=0;TruScore=86;MatchId=1040.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:34:0|1:22:1:1:31:./.:0:3:7:0:0/1:19:13:./.:.:.:.:.:.
chr13	111559414	HG2_Ill_scalpel_13652	ACAGCAACACTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGAT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2051:HG4_Ill_Krunchall_19993:HG3_Ill_Krunchall_19257:HG2_Ill_Krunchall_19653:HG2_PB_assemblyticsfalcon_7512:HG4_PB_assemblyticsfalcon_7386:HG3_PB_assemblyticsfalcon_7477:HG2_PB_assemblyticsPBcR_7243:HG2_Ill_Spiral_964:HG3_PB_pbsv_14120:HG4_PB_pbsv_14427:HG2_PB_HySA_26377:HG4_Ill_MetaSV_1459:HG2_Ill_tnscope_1598:HG2_Ill_MetaSV_1377:HG4_PB_SVrefine2PBcRDovetail_7200:HG4_PB_SVrefine2Falcon1Dovetail_8800:HG4_PB_HySA_21059:HG4_Ill_svaba_18063:HG4_Ill_scalpel_13347:HG4_Ill_manta_3408:HG4_Ill_SVrefine2DISCOVARDovetail_10233:HG4_Ill_GATKHCSBGrefine_9955:HG4_10X_allpass_2685:HG3_PB_SVrefine2PBcRDovetail_6817:HG3_PB_SVrefine2Falcon1Dovetail_8752:HG3_PB_HySA_21784:HG3_Ill_svaba_18182:HG3_Ill_scalpel_13907:HG3_Ill_manta_3267:HG3_Ill_SVrefine2DISCOVARDovetail_10357:HG3_Ill_MetaSV_1487:HG3_Ill_GATKHCSBGrefine_9537:HG3_10X_allpass_2802:HG2_PB_pbsv_14459:HG2_PB_SVrefine2PBcRplusDovetail_3052:HG2_PB_SVrefine2PB10Xhap12_10444:HG2_PB_SVrefine2Falcon2Bionano_7217:HG2_PB_SVrefine2Falcon1plusDovetail_3241:HG2_Ill_svaba_18025:HG2_Ill_scalpel_13652:HG2_Ill_manta_4006:HG2_Ill_SpiralSDKrefine_4672:HG2_Ill_SVrefine2DISCOVARplusDovetail_3584:HG2_Ill_GATKHCSBGrefine_9645:HG2_10X_allpass_2293:HG2_10X_SVrefine210Xhap12_10043;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10043:HG2_10X_allpass_2293:HG2_Ill_GATKHCSBGrefine_9645:HG2_Ill_SVrefine2DISCOVARplusDovetail_3584:HG2_Ill_SpiralSDKrefine_4672:HG2_Ill_manta_4006:HG2_Ill_scalpel_13652:HG2_Ill_svaba_18025:HG2_PB_SVrefine2Falcon1plusDovetail_3241:HG2_PB_SVrefine2Falcon2Bionano_7217:HG2_PB_SVrefine2PB10Xhap12_10444:HG2_PB_SVrefine2PBcRplusDovetail_3052:HG2_PB_pbsv_14459:HG3_10X_allpass_2802:HG3_Ill_GATKHCSBGrefine_9537:HG3_Ill_MetaSV_1487:HG3_Ill_SVrefine2DISCOVARDovetail_10357:HG3_Ill_manta_3267:HG3_Ill_scalpel_13907:HG3_Ill_svaba_18182:HG3_PB_HySA_21784:HG3_PB_SVrefine2Falcon1Dovetail_8752:HG3_PB_SVrefine2PBcRDovetail_6817:HG4_10X_allpass_2685:HG4_Ill_GATKHCSBGrefine_9955:HG4_Ill_SVrefine2DISCOVARDovetail_10233:HG4_Ill_manta_3408:HG4_Ill_scalpel_13347:HG4_Ill_svaba_18063:HG4_PB_HySA_21059:HG4_PB_SVrefine2Falcon1Dovetail_8800:HG4_PB_SVrefine2PBcRDovetail_7200;NumExactMatchSVs=32;ClusterMaxShiftDist=0.116129;ClusterMaxSizeDiff=0.116129;ClusterMaxEditDist=0.116129;PBcalls=18;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-238;DistBack=12283;DistForward=-225;DistMin=-225;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=13:111559415-111559666;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1042.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:1:33:1:16:1/1:0:26:0:32:1/1:0:36:./.:.:.:.:.:.
chr13	112082256	HG2_PB_HySA_26400	ATGCAAATCTTGGGATAGTCCTTGTGTCTTGTTAGATGCTGGTGAGTGTTACGAG	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_19324:HG3_PB_assemblyticsfalcon_7492:HG2_PB_assemblyticsfalcon_7526:HG2_PB_assemblyticsPBcR_7258:HG4_PB_assemblyticsfalcon_7399:HG2_PB_pbsv_14474:HG4_PB_pbsv_14439:HG2_Ill_GATKHC_23102:HG2_Ill_GATKHCSBGrefine_9659:HG3_PB_pbsv_14135:HG2_PB_HySA_26400:HG2_Ill_Krunchall_19663;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19324:HG2_PB_HySA_26400:HG2_Ill_Krunchall_19663;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.0952381;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=-255;DistForward=101;DistMin=-255;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=272;REFWIDENED=13:112082199-112082524;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1043.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:32:1/1:2:16:1:14:./.:0:1:0:1:./.:0:4:./.:.:.:.:.:.
chr13	112614372	HG2_Ill_Krunchall_19673	ATGGATAGATGAATAGATAAAGAGACGGATGGATGGAGAGATGAATGGATGGG	A	20	PASS	ClusterIDs=HG3_PB_HySA_21816:HG4_PB_HySA_21094:HG2_PB_HySA_26422:HG4_PB_assemblyticsfalcon_7413:HG4_PB_pbsv_14452:HG2_PB_pbsv_14485:HG3_PB_pbsv_14147:HG4_Ill_svaba_18080:HG4_Ill_Krunchall_20007:HG4_Ill_GATKHC_23081:HG4_Ill_GATKHCSBGrefine_9971:HG4_Ill_250bpfermikitraw_19072:HG4_Ill_150bpfermikitraw_18366:HG3_Ill_svaba_18198:HG3_Ill_scalpel_13921:HG3_Ill_Krunchall_19274:HG3_Ill_GATKHC_22989:HG3_Ill_GATKHCSBGrefine_9555:HG3_Ill_250bpfermikitraw_18763:HG2_PB_assemblyticsfalcon_7544:HG2_PB_assemblyticsPBcR_7275:HG2_Ill_svaba_18044:HG2_Ill_manta_4011:HG2_Ill_SpiralSDKrefine_4687:HG2_Ill_Krunchall_19673:HG2_Ill_GATKHC_23116:HG2_Ill_GATKHCSBGrefine_9667:HG2_Ill_250bpfermikitraw_19334:HG2_Ill_150bpfermikitraw_18230;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18230:HG2_Ill_250bpfermikitraw_19334:HG2_Ill_GATKHCSBGrefine_9667:HG2_Ill_GATKHC_23116:HG2_Ill_Krunchall_19673:HG2_Ill_SpiralSDKrefine_4687:HG2_Ill_manta_4011:HG2_Ill_svaba_18044:HG2_PB_assemblyticsPBcR_7275:HG2_PB_assemblyticsfalcon_7544:HG3_Ill_250bpfermikitraw_18763:HG3_Ill_GATKHCSBGrefine_9555:HG3_Ill_GATKHC_22989:HG3_Ill_Krunchall_19274:HG3_Ill_scalpel_13921:HG3_Ill_svaba_18198:HG4_Ill_150bpfermikitraw_18366:HG4_Ill_250bpfermikitraw_19072:HG4_Ill_GATKHCSBGrefine_9971:HG4_Ill_GATKHC_23081:HG4_Ill_Krunchall_20007:HG4_Ill_svaba_18080;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.135922;PBcalls=9;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=5198;DistForward=4509;DistMin=4509;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=57;REFWIDENED=13:112614371-112614482;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1044.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:50:1/1:8:32:2:18:./.:1:32:15:48:1/1:0:33:./.:.:.:.:.:.
chr13	113104121	HG2_PB_SVrefine2Falcon2Bionano_7239	TCACTGTGCACACATCGTCATCGCAACTGCACACACCTCCCAGCTCTCCCAGCGACCGTGCACACTTCATCATCACAACCGCACACACCTCCCAGCTCTCCCAGCCACCGTGCACACTTCATCACAACCGCACACACCTCCCAGCTCTCCCAGC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7239:HG2_PB_assemblyticsfalcon_7574:HG2_PB_SVrefine2Falcon1plusDovetail_3268:HG4_PB_SVrefine2Falcon1Dovetail_8826:HG3_PB_SVrefine2Falcon1Dovetail_8785:HG4_PB_assemblyticsfalcon_7456:HG3_PB_assemblyticsfalcon_7553:HG3_PB_pbsv_14163:HG2_PB_pbsv_14503:HG3_PB_SVrefine2PBcRDovetail_6847:HG2_PB_SVrefine2PBcRplusDovetail_3076;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7239:HG3_PB_SVrefine2PBcRDovetail_6847:HG2_PB_SVrefine2PBcRplusDovetail_3076;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0447284;ClusterMaxSizeDiff=0.0447284;ClusterMaxEditDist=0.0886076;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-153;DistBack=-105;DistForward=-154;DistMin=-154;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=312;REFWIDENED=13:113104122-113104586;PctSeqSimilarity=0.9444;PctSizeSimilarity=1;PctRecOverlap=0.6558;SizeDiff=0;StartDistance=-53;EndDistance=-53;GTMatch=0;TruScore=86;MatchId=1045.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:32:./.:9:25:15:3:0/0:9:1:11:0:./.:26:3:./.:.:.:.:.:.
chr13	113415879	HG2_Ill_250bpfermikitraw_19353	GGAAGCACCCCTGAGGATAAAGGGGACATCGTGCACATAGGTTTGGGTACTATCTCGGATTCAGGAGTCCCCTGGGGTCTTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10078:HG3_PB_HySA_21841:HG2_PB_HySA_26450:HG4_PB_pbsv_14478:HG3_PB_pbsv_14170:HG2_PB_pbsv_14512:HG4_PB_assemblyticsfalcon_7464:HG4_Ill_svaba_18101:HG4_Ill_Krunchall_20021:HG4_Ill_GATKHCSBGrefine_9987:HG4_Ill_250bpfermikitraw_19085:HG3_Ill_svaba_18222:HG3_Ill_Krunchall_19289:HG3_Ill_GATKHCSBGrefine_9569:HG3_Ill_250bpfermikitraw_18783:HG3_Ill_150bpfermikitraw_18256:HG2_Ill_SpiralSDKrefine_4701:HG2_Ill_250bpfermikitraw_19353:HG3_PB_SVrefine2PBcRDovetail_6852:HG3_Ill_SVrefine2DISCOVARDovetail_10378:HG2_PB_SVrefine2PBcRplusDovetail_3082:HG2_PB_SVrefine2PB10Xhap12_10479:HG2_PB_SVrefine2Falcon1plusDovetail_3275:HG2_Ill_SVrefine2DISCOVARplusDovetail_3605;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19353:HG2_Ill_SpiralSDKrefine_4701:HG3_Ill_150bpfermikitraw_18256:HG3_Ill_250bpfermikitraw_18783:HG3_Ill_GATKHCSBGrefine_9569:HG3_Ill_Krunchall_19289:HG3_Ill_svaba_18222:HG4_Ill_250bpfermikitraw_19085:HG4_Ill_GATKHCSBGrefine_9987:HG4_Ill_Krunchall_20021:HG4_Ill_svaba_18101;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0243902;ClusterMaxSizeDiff=0.0243902;ClusterMaxEditDist=0.159509;PBcalls=10;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-81;DistBack=5516;DistForward=-58;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=162;REFWIDENED=13:113415823-113416065;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1046.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:32:0|1:7:1:0:10:./.:10:0:0:3:0/1:31:29:./.:.:.:.:.:.
chr13	113426838	HG4_Ill_svaba_18102	TTCATCACCCTCAAATGAAACCCCATGCCCAGTACCAGGCCCTCCCAAGTGCTTG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_965:HG3_PB_HySA_21842:HG2_PB_HySA_26451:HG4_PB_HySA_21110:HG4_Ill_Spiral_1124:HG2_PB_pbsv_14514:HG4_PB_pbsv_14480:HG3_PB_pbsv_14171:HG4_PB_SVrefine2Falcon1Dovetail_8834:HG4_Ill_svaba_18102:HG4_Ill_manta_3414:HG4_Ill_SVrefine2DISCOVARDovetail_10258:HG4_Ill_Krunchall_20022:HG4_Ill_GATKHC_23114:HG4_Ill_GATKHCSBGrefine_9992:HG4_Ill_Cortex_1006:HG4_Ill_250bpfermikitraw_19086:HG4_Ill_150bpfermikitraw_18380:HG3_PB_SVrefine2PBcRDovetail_6853:HG3_PB_SVrefine2Falcon1Dovetail_8790:HG3_Ill_svaba_18223:HG3_Ill_scalpel_13938:HG3_Ill_manta_3272:HG3_Ill_SVrefine2DISCOVARDovetail_10379:HG3_Ill_Krunchall_19290:HG3_Ill_GATKHC_23013:HG3_Ill_GATKHCSBGrefine_9570:HG3_Ill_Cortex_1058:HG3_Ill_250bpfermikitraw_18784:HG3_Ill_150bpfermikitraw_18257:HG2_PB_SVrefine2PBcRplusDovetail_3084:HG2_PB_SVrefine2PB10Xhap12_10481:HG2_PB_SVrefine2Falcon1plusDovetail_3276:HG2_Ill_svaba_18068:HG2_Ill_manta_4015:HG2_Ill_SpiralSDKrefine_4702:HG2_Ill_SVrefine2DISCOVARplusDovetail_3607:HG2_Ill_Krunchall_19688:HG2_Ill_GATKHC_23143:HG2_Ill_GATKHCSBGrefine_9684:HG2_Ill_Cortex_2436:HG2_Ill_250bpfermikitraw_19354:HG2_Ill_150bpfermikitraw_18245:HG2_10X_SVrefine210Xhap12_10080:HG3_Ill_Spiral_15049;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10080:HG2_Ill_150bpfermikitraw_18245:HG2_Ill_250bpfermikitraw_19354:HG2_Ill_Cortex_2436:HG2_Ill_GATKHCSBGrefine_9684:HG2_Ill_GATKHC_23143:HG2_Ill_Krunchall_19688:HG2_Ill_SVrefine2DISCOVARplusDovetail_3607:HG2_Ill_SpiralSDKrefine_4702:HG2_Ill_manta_4015:HG2_Ill_svaba_18068:HG2_PB_SVrefine2Falcon1plusDovetail_3276:HG2_PB_SVrefine2PB10Xhap12_10481:HG2_PB_SVrefine2PBcRplusDovetail_3084:HG3_Ill_150bpfermikitraw_18257:HG3_Ill_250bpfermikitraw_18784:HG3_Ill_Cortex_1058:HG3_Ill_GATKHCSBGrefine_9570:HG3_Ill_GATKHC_23013:HG3_Ill_Krunchall_19290:HG3_Ill_SVrefine2DISCOVARDovetail_10379:HG3_Ill_manta_3272:HG3_Ill_scalpel_13938:HG3_Ill_svaba_18223:HG3_PB_SVrefine2Falcon1Dovetail_8790:HG3_PB_SVrefine2PBcRDovetail_6853:HG4_Ill_150bpfermikitraw_18380:HG4_Ill_250bpfermikitraw_19086:HG4_Ill_Cortex_1006:HG4_Ill_GATKHCSBGrefine_9992:HG4_Ill_GATKHC_23114:HG4_Ill_Krunchall_20022:HG4_Ill_SVrefine2DISCOVARDovetail_10258:HG4_Ill_manta_3414:HG4_Ill_svaba_18102:HG4_PB_SVrefine2Falcon1Dovetail_8834;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0540541;PBcalls=12;Illcalls=32;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=29;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=15;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=4986;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=48;REFWIDENED=13:113426839-113426940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1047.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:36:0|1:20:1:1:36:0|1:33:0:0:11:0/1:22:27:./.:.:.:.:.:.
chr13	113455326	HG2_Ill_SVrefine2DISCOVARplusDovetail_3608	GAAAAGCCCTACAGCTGACGTCATACTTAATGGTGAAAAACGAGATGGTTTCACCCTAAGATTGGAAAAAAGGCAAGAAATCCCTTATCACTGTTCTTATTCAGCATTGTACTGGAAATCCTAGCTAATACAGTAAGAGTAGAAATGGGAAT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3608:HG2_PB_pbsv_14516:HG4_PB_HySA_21116:HG4_PB_pbsv_14483:HG4_PB_SVrefine2PBcRDovetail_7227:HG4_Ill_SVrefine2DISCOVARDovetail_10259:HG2_PB_SVrefine2PBcRplusDovetail_3085:HG2_PB_SVrefine2PB10Xhap12_10482:HG2_PB_SVrefine2Falcon2Bionano_7245;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3608:HG4_PB_SVrefine2PBcRDovetail_7227:HG4_Ill_SVrefine2DISCOVARDovetail_10259:HG2_PB_SVrefine2PBcRplusDovetail_3085:HG2_PB_SVrefine2PB10Xhap12_10482:HG2_PB_SVrefine2Falcon2Bionano_7245;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0266667;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.0469799;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-151;DistBack=10842;DistForward=-152;DistMin=-152;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=315;REFWIDENED=13:113455327-113455792;PctSeqSimilarity=0.9898;PctSizeSimilarity=1;PctRecOverlap=0.6908;SizeDiff=0;StartDistance=-47;EndDistance=-47;GTMatch=0;TruScore=89;MatchId=1048.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:20:1|0:2:14:21:1:0/0:7:1:9:0:0/0:37:0:./.:.:.:.:.:.
chr13	113616375	HG4_Ill_150bpfermikitraw_18385	ACATGCACACACAAACACGCTCACACCCAGGCATGCACACACACGCACGGACACGCACATG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_18250:HG4_PB_HySA_21124:HG4_PB_assemblyticsfalcon_7480:HG3_PB_assemblyticsfalcon_7576:HG3_PB_pbsv_14182:HG2_PB_pbsv_14521:HG3_PB_HySA_21856:HG4_PB_pbsv_14495:HG4_Ill_svaba_18108:HG4_Ill_scalpel_13373:HG4_Ill_manta_3415:HG4_Ill_Krunchall_20027:HG4_Ill_GATKHCSBGrefine_9997:HG4_Ill_250bpfermikitraw_19092:HG4_Ill_150bpfermikitraw_18385:HG3_Ill_svaba_18229:HG3_Ill_scalpel_13941:HG3_Ill_manta_3273:HG3_Ill_Krunchall_19295:HG3_Ill_GATKHC_23025:HG3_Ill_GATKHCSBGrefine_9574:HG3_Ill_250bpfermikitraw_18790:HG3_Ill_150bpfermikitraw_18265:HG2_PB_assemblyticsPBcR_7310:HG2_Ill_svaba_18072:HG2_Ill_scalpel_13685:HG2_Ill_Krunchall_19693:HG2_Ill_GATKHC_23149:HG2_Ill_GATKHCSBGrefine_9688:HG2_Ill_250bpfermikitraw_19359;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18250:HG4_PB_pbsv_14495:HG4_Ill_svaba_18108:HG4_Ill_scalpel_13373:HG4_Ill_manta_3415:HG4_Ill_Krunchall_20027:HG4_Ill_GATKHCSBGrefine_9997:HG4_Ill_250bpfermikitraw_19092:HG4_Ill_150bpfermikitraw_18385:HG3_Ill_svaba_18229:HG3_Ill_scalpel_13941:HG3_Ill_manta_3273:HG3_Ill_Krunchall_19295:HG3_Ill_GATKHC_23025:HG3_Ill_GATKHCSBGrefine_9574:HG3_Ill_250bpfermikitraw_18790:HG3_Ill_150bpfermikitraw_18265:HG2_PB_assemblyticsPBcR_7310:HG2_Ill_svaba_18072:HG2_Ill_scalpel_13685:HG2_Ill_Krunchall_19693:HG2_Ill_GATKHC_23149:HG2_Ill_GATKHCSBGrefine_9688:HG2_Ill_250bpfermikitraw_19359;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0495868;ClusterMaxSizeDiff=0.0495868;ClusterMaxEditDist=0.117647;PBcalls=8;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=956;DistForward=44;DistMin=44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=55;REFWIDENED=13:113616333-113616447;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1050.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:21:0|1:22:2:4:27:./.:31:2:1:21:0/1:33:9:./.:.:.:.:.:.
chr13	113790936	HG4_Ill_GATKHCSBGrefine_10002	TAATTCTTGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCTGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10090:HG2_10X_allpass_2297:HG4_PB_HySA_21145:HG2_Ill_Krunchall_19702:HG4_PB_pbsv_14514:HG2_PB_pbsv_14538:HG2_PB_assemblyticsPBcR_7319:HG2_PB_SVrefine2PBcRplusDovetail_3099:HG2_PB_PB10Xdip_8378:HG2_PB_PB10Xdip_8377:HG4_Ill_MetaSV_1475:HG2_PB_HySA_26490:HG2_Ill_tnscope_1601:HG2_Ill_MetaSV_1388:HG4_Ill_scalpel_13378:HG4_Ill_manta_3416:HG4_Ill_GATKHCSBGrefine_10002:HG4_10X_allpass_2694:HG3_PB_assemblyticsfalcon_7591:HG3_PB_SVrefine2Falcon1Dovetail_8800:HG2_Ill_scalpel_13691:HG2_Ill_GATKHCSBGrefine_9693:HG2_PB_SVrefine2PB10Xhap12_10498:HG4_PB_SVrefine2PBcRDovetail_7241:HG4_Ill_SVrefine2DISCOVARDovetail_10265:HG2_PB_SVrefine2PB10Xhap12_10497:HG2_PB_SVrefine2Falcon2Bionano_7262:HG2_PB_SVrefine2Falcon1plusDovetail_3290:HG2_Ill_SVrefine2DISCOVARplusDovetail_3616;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9693:HG2_Ill_scalpel_13691:HG3_PB_SVrefine2Falcon1Dovetail_8800:HG3_PB_assemblyticsfalcon_7591:HG4_10X_allpass_2694:HG4_Ill_GATKHCSBGrefine_10002:HG4_Ill_manta_3416:HG4_Ill_scalpel_13378;NumExactMatchSVs=8;ClusterMaxShiftDist=0.127273;ClusterMaxSizeDiff=0.127273;ClusterMaxEditDist=0.14871;PBcalls=15;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=18;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=7735;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=79;REFWIDENED=13:113790873-113791278;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1053.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:29:0|1:28:0:0:25:1|0:0:10:25:0:0/1:11:25:0/1:25:8:.:.:.
chr13	113991046	HG3_Ill_250bpfermikitraw_18800	GGTACCAACCATCCCTCCAGACAGCGGACGCACACAGGCCAAGTGCCCGCCTGGCGCTCAGCCCTAGAACT	G	20	PASS	ClusterIDs=HG4_PB_HySA_21170:HG3_PB_HySA_21895:HG2_Ill_Krunchall_19710:HG3_PB_pbsv_14207:HG3_PB_HySA_21894:HG2_PB_pbsv_14548:HG4_Ill_svaba_18123:HG4_Ill_scalpel_13383:HG4_Ill_manta_3417:HG4_Ill_Krunchall_20037:HG4_Ill_GATKHC_23147:HG4_Ill_GATKHCSBGrefine_10006:HG4_Ill_Cortex_1010:HG4_Ill_250bpfermikitraw_19106:HG4_Ill_150bpfermikitraw_18399:HG3_PB_assemblyticsfalcon_7610:HG3_Ill_svaba_18241:HG3_Ill_scalpel_13950:HG3_Ill_manta_3274:HG3_Ill_Krunchall_19303:HG3_Ill_GATKHC_23040:HG3_Ill_GATKHCSBGrefine_9578:HG3_Ill_Cortex_1062:HG3_Ill_250bpfermikitraw_18800:HG3_Ill_150bpfermikitraw_18281:HG2_PB_assemblyticsfalcon_7613:HG2_PB_assemblyticsPBcR_7336:HG2_Ill_svaba_18087:HG2_Ill_manta_4018:HG2_Ill_Krunchall_19709:HG2_Ill_GATKHC_23167:HG2_Ill_GATKHCSBGrefine_9694:HG2_Ill_Cortex_2442:HG2_Ill_250bpfermikitraw_19374:HG2_Ill_150bpfermikitraw_18261:HG4_PB_pbsv_14521:HG4_PB_assemblyticsfalcon_7515;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18261:HG2_Ill_250bpfermikitraw_19374:HG2_Ill_Cortex_2442:HG2_Ill_GATKHCSBGrefine_9694:HG2_Ill_GATKHC_23167:HG2_Ill_Krunchall_19709:HG2_Ill_manta_4018:HG2_Ill_svaba_18087:HG2_PB_assemblyticsPBcR_7336:HG2_PB_assemblyticsfalcon_7613:HG3_Ill_150bpfermikitraw_18281:HG3_Ill_250bpfermikitraw_18800:HG3_Ill_Cortex_1062:HG3_Ill_GATKHCSBGrefine_9578:HG3_Ill_GATKHC_23040:HG3_Ill_Krunchall_19303:HG3_Ill_manta_3274:HG3_Ill_scalpel_13950:HG3_Ill_svaba_18241:HG3_PB_assemblyticsfalcon_7610:HG4_Ill_150bpfermikitraw_18399:HG4_Ill_250bpfermikitraw_19106:HG4_Ill_Cortex_1010:HG4_Ill_GATKHCSBGrefine_10006:HG4_Ill_GATKHC_23147:HG4_Ill_Krunchall_20037:HG4_Ill_manta_3417:HG4_Ill_scalpel_13383:HG4_Ill_svaba_18123;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0431655;ClusterMaxEditDist=0.0869565;PBcalls=10;Illcalls=27;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=13;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=213;DistForward=5814;DistMin=213;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=35;REFWIDENED=13:113991036-113991140;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1054.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:44:1/1:2:21:1:27:1/1:0:8:0:13:1/1:0:39:./.:.:.:.:.:.
chr13	114168742	HG3_PB_SVrefine2PBcRDovetail_6877	AAGGAAGACATGAGCCTCGCTAGTATTCGGGGTGCAGGCTGATGGGACTGAGATCGACGCCATCCACACAAGCCTGCTGCCAAGCTTTGTTTTAGACCGAGTCTTGCAACAGGAAGACATGAGCCTCGCTAGTATTTGGGGTGCAGGCTGATGGGACTGAGATCGACGCCATCCACACAAGCCTGCTGCCAAGCTTTGTTTTAGACCGAGTCTTGCAAC	A	20	PASS	ClusterIDs=HG2_10X_allpass_2299:HG3_Ill_Krunchall_19312:HG3_PB_pbsv_14229:HG2_PB_pbsv_14572:HG3_PB_HySA_21928:HG4_PB_SVrefine2Falcon1Dovetail_8867:HG3_PB_SVrefine2PBcRDovetail_6877:HG3_Ill_svaba_18253:HG3_Ill_SVrefine2DISCOVARDovetail_10393:HG3_Ill_GATKHCSBGrefine_9592:HG3_Ill_250bpfermikitraw_18811:HG3_Ill_150bpfermikitraw_18289:HG3_10X_allpass_2812:HG2_PB_SVrefine2PB10Xhap12_10519:HG2_PB_SVrefine2Falcon2Bionano_7278:HG2_PB_SVrefine2Falcon1plusDovetail_3313:HG2_Ill_svaba_18100:HG2_Ill_SpiralSDKrefine_4728;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_2299:HG4_PB_SVrefine2Falcon1Dovetail_8867:HG3_PB_SVrefine2PBcRDovetail_6877:HG3_Ill_svaba_18253:HG3_Ill_SVrefine2DISCOVARDovetail_10393:HG3_Ill_GATKHCSBGrefine_9592:HG3_Ill_250bpfermikitraw_18811:HG3_Ill_150bpfermikitraw_18289:HG3_10X_allpass_2812:HG2_PB_SVrefine2PB10Xhap12_10519:HG2_PB_SVrefine2Falcon2Bionano_7278:HG2_PB_SVrefine2Falcon1plusDovetail_3313:HG2_Ill_svaba_18100:HG2_Ill_SpiralSDKrefine_4728;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00913242;ClusterMaxSizeDiff=0.00913242;ClusterMaxEditDist=0.0183486;PBcalls=8;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-218;DistBack=-239;DistForward=-217;DistMin=-239;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=106;REFWIDENED=13:114168743-114169066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1055.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:24:0|1:24:1:1:26:0|1:19:0:0:7:0/1:37:22:./.:.:.:.:.:.
chr13	114173930	HG4_PB_SVrefine2PBcRDovetail_7255	CTTGGTCACACAGTGAAGGCTCATTCCGTGTGGTGGCTTGGGTGCGTCTGCACCATTTGGACACCAAGTCTGTG	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_19386:HG4_PB_HySA_21198:HG2_PB_pbsv_14573:HG4_PB_pbsv_14541:HG2_PB_HySA_26541:HG4_PB_assemblyticsfalcon_7524:HG4_PB_SVrefine2PBcRDovetail_7255:HG4_Ill_250bpfermikitraw_19114:HG2_Ill_SpiralSDKrefine_4729:HG2_Ill_GATKHCSBGrefine_9698;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19386:HG4_PB_SVrefine2PBcRDovetail_7255:HG4_Ill_250bpfermikitraw_19114:HG2_Ill_SpiralSDKrefine_4729:HG2_Ill_GATKHCSBGrefine_9698;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0408163;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.0544218;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-73;DistBack=5081;DistForward=5869;DistMin=5081;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=198;REFWIDENED=13:114173931-114174201;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1056.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:23:1|0:2:18:17:4:1|0:0:11:12:1:0/1:21:14:./.:.:.:.:.:.
chr13	114212121	HG2_PB_SVrefine2PB10Xhap12_10525	TCTCTCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8871:HG4_Ill_svaba_18136:HG3_Ill_svaba_18257:HG3_Ill_GATKHCSBGrefine_9594:HG2_Ill_svaba_18104:HG2_Ill_GATKHCSBGrefine_9700:HG3_PB_pbsv_14235:HG3_PB_HySA_21936:HG4_PB_SVrefine2PBcRDovetail_7258:HG3_PB_SVrefine2PBcRDovetail_6880:HG3_PB_SVrefine2Falcon1Dovetail_8828:HG3_Ill_SVrefine2DISCOVARDovetail_10396:HG2_PB_SVrefine2PBcRplusDovetail_3116:HG2_PB_SVrefine2PB10Xhap12_10525:HG2_PB_SVrefine2Falcon2Bionano_7280:HG2_Ill_SVrefine2DISCOVARplusDovetail_3624:HG4_Ill_svaba_18135:HG4_Ill_SVrefine2DISCOVARDovetail_10277:HG3_Ill_svaba_18256:HG2_Ill_svaba_18103:HG2_10X_SVrefine210Xhap12_10101:HG2_PB_SVrefine2Falcon1plusDovetail_3315:HG4_PB_pbsv_14545:HG2_PB_pbsv_14578;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3624:HG2_PB_SVrefine2Falcon2Bionano_7280:HG2_PB_SVrefine2PB10Xhap12_10525:HG2_PB_SVrefine2PBcRplusDovetail_3116:HG3_Ill_SVrefine2DISCOVARDovetail_10396:HG3_PB_SVrefine2Falcon1Dovetail_8828:HG3_PB_SVrefine2PBcRDovetail_6880:HG4_PB_SVrefine2PBcRDovetail_7258;NumExactMatchSVs=8;ClusterMaxShiftDist=0.176991;ClusterMaxSizeDiff=0.176991;ClusterMaxEditDist=0.176991;PBcalls=12;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-118;DistBack=9;DistForward=-119;DistMin=-119;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=70;REFWIDENED=13:114212076-114212263;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1058.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:65:1/1:2:36:1:17:./.:1:19:0:13:1/1:0:15:./.:.:.:.:.:.
chr13	114214396	HG3_Ill_SVrefine2DISCOVARDovetail_10397	ACGCAGGTCTGGACGGGGTCGCGGGTCTGGACAGGGTCGTGGGTCTGGATGGGGTCGCAGGTCTGGATGGGGTCACGGGTCTGGACGGGGTCGCAGGTCTGGACGGGGTCGCAGGTCTGGACGGGGTCGCACAGCTTTGGACCGGGTCGAGGGTCTGGACGGGGTCGCGGGTCTGGACGGGGTCACGGGTCTGGACGGGGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10102:HG3_Ill_MetaSV_1504:HG4_Ill_GATKHCSBGrefine_10016:HG3_Ill_GATKHC_23060:HG3_Ill_GATKHCSBGrefine_9595:HG2_Ill_GATKHCSBGrefine_9701:HG2_10X_allpass_2300:HG3_PB_HySA_21937:HG2_PB_pbsv_14579:HG4_PB_pbsv_14546:HG3_PB_pbsv_14236:HG4_PB_SVrefine2PBcRDovetail_7259:HG4_PB_SVrefine2Falcon1Dovetail_8872:HG4_Ill_SVrefine2DISCOVARDovetail_10278:HG3_PB_SVrefine2PBcRDovetail_6881:HG3_PB_SVrefine2Falcon1Dovetail_8829:HG3_Ill_SVrefine2DISCOVARDovetail_10397:HG2_PB_SVrefine2PBcRplusDovetail_3117:HG2_PB_SVrefine2PB10Xhap12_10526:HG2_PB_SVrefine2Falcon2Bionano_7281:HG2_PB_SVrefine2Falcon1plusDovetail_3316:HG2_Ill_SVrefine2DISCOVARplusDovetail_3625;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10102:HG4_PB_SVrefine2PBcRDovetail_7259:HG4_PB_SVrefine2Falcon1Dovetail_8872:HG4_Ill_SVrefine2DISCOVARDovetail_10278:HG3_PB_SVrefine2PBcRDovetail_6881:HG3_PB_SVrefine2Falcon1Dovetail_8829:HG3_Ill_SVrefine2DISCOVARDovetail_10397:HG2_PB_SVrefine2PBcRplusDovetail_3117:HG2_PB_SVrefine2PB10Xhap12_10526:HG2_PB_SVrefine2Falcon2Bionano_7281:HG2_PB_SVrefine2Falcon1plusDovetail_3316:HG2_Ill_SVrefine2DISCOVARplusDovetail_3625;NumExactMatchSVs=12;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.074813;PBcalls=12;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-200;DistBack=-5620;DistForward=4335;DistMin=-5620;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=280;REFWIDENED=13:114214397-114214876;PctSeqSimilarity=0.9536;PctSizeSimilarity=0.9901;PctRecOverlap=0.2562;SizeDiff=-2;StartDistance=-149;EndDistance=-151;GTMatch=0;TruScore=73;MatchId=1059.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:59:1/1:3:33:2:15:0/0:13:1:12:1:0/0:15:0:./.:.:.:.:.:.
chr13	114433164	HG2_PB_SVrefine2PB10Xhap12_10534	CACCCAGACCCGTCCCTCCATCCCGACACAGTCCCCCAGTCCCCGTGGCTGAGCCCAGACCCGCCCCTCCATCCCGACACAGTCCCCCAGTCCCTGCGGCTGCA	AG	10	PASS	ClusterIDs=HG4_PB_pbsv_14553:HG2_PB_pbsv_14586:HG2_PB_SVrefine2PBcRplusDovetail_3122:HG2_PB_SVrefine2PB10Xhap12_10534:HG2_PB_SVrefine2Falcon2Bionano_7286:HG2_PB_SVrefine2PB10Xhap12_10533;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7286:HG2_PB_SVrefine2PB10Xhap12_10534:HG2_PB_SVrefine2PBcRplusDovetail_3122;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0292683;ClusterMaxSizeDiff=0.0292683;ClusterMaxEditDist=0.0886699;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-102;DistBack=342;DistForward=235;DistMin=235;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=788;REFWIDENED=13:114432702-114433591;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9903;PctRecOverlap=0.9904;SizeDiff=-1;StartDistance=1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=1061.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:17:./.:19:3:2:4:./.:0:4:12:1:./.:2:1:./.:.:.:.:.:.
chr13	114510224	HG2_PB_SVrefine2PB10Xhap12_10538	AGATGTGGGGGTGGTCCTTCCCGTCACACGCAGGCTTACGGGATGTGGAGGGTGGTCCTCCCTGTCACACGCAGGCTTACGGGATGTGGGGGGCGGTCCTCCCCGTCACACGAGGGCTTACGGGATGTGGGGGTGGTCCTCCCTGTCACACGTGGGCTTACGGGATGTGGGGGGTGGTCCTCCCCGTCACACGCAGGCTTACGGGATGTGGGGGTGGTCCTCCCCGTCACACGCGGGCTTATGG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10538:HG2_PB_assemblyticsPBcR_7362:HG2_PB_SVrefine2Falcon1plusDovetail_3323:HG2_PB_SVrefine2PBcRplusDovetail_3126:HG2_PB_pbsv_14592:HG4_PB_pbsv_14558:HG2_PB_SVrefine2PBcRplusDovetail_3125;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10538:HG2_PB_SVrefine2PBcRplusDovetail_3125;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0456432;ClusterMaxSizeDiff=0.0456432;ClusterMaxEditDist=0.263048;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-243;DistBack=419;DistForward=-102;DistMin=-102;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=379;REFWIDENED=13:114510225-114510846;PctSeqSimilarity=0.9572;PctSizeSimilarity=0.9959;PctRecOverlap=0.4776;SizeDiff=-1;StartDistance=-127;EndDistance=-128;GTMatch=0;TruScore=81;MatchId=1062.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:32:0|1:18:1:2:27:./.:4:0:9:0:0/0:29:0:./.:.:.:.:4244:.
chr13	114529355	HG2_PB_pbsv_14601	CCCGGCCTCGCAGGCACCTTCTCTCCCCGGCCTCCCGGCGCTGGCCTCGCAGGCACCTTCTCTCCCCAGCCTCCCGGCG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10547:HG4_PB_assemblyticsfalcon_7556:HG3_PB_assemblyticsfalcon_7651:HG2_Ill_breakscan11_2087:HG3_PB_pbsv_14257:HG2_PB_pbsv_14601:HG2_PB_SVrefine2PBcRplusDovetail_3133;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10547:HG2_PB_pbsv_14601:HG2_PB_SVrefine2PBcRplusDovetail_3133;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.140127;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=-5605;DistForward=41;DistMin=-5605;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=295;REFWIDENED=13:114529356-114529728;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1063.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:./.:8:25:15:2:./.:2:1:0:3:1/1:1:11:./.:.:.:.:4244:.
chr13	114542303	HG2_Ill_SpiralSDKrefine_4740	GGCCTTTCAATCAGTGGGTGCCACTGACACCACAGGTCTGCACTCAAGGACGGTCAGAGGTGAAATTTCCCCCCC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10552:HG2_PB_assemblyticsPBcR_7369:HG2_PB_pbsv_14606:HG4_PB_pbsv_14567:HG4_Ill_svaba_18151:HG4_Ill_250bpfermikitraw_19121:HG2_Ill_SpiralSDKrefine_4740:HG2_Ill_250bpfermikitraw_19397;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19397:HG2_Ill_SpiralSDKrefine_4740:HG4_Ill_250bpfermikitraw_19121:HG4_Ill_svaba_18151;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0402685;ClusterMaxSizeDiff=0.0402685;ClusterMaxEditDist=0.0927152;PBcalls=4;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-74;DistBack=869;DistForward=2007;DistMin=869;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=149;REFWIDENED=13:114542250-114542472;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1064.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:16:0|1:13:1:2:11:./.:1:2:12:0:0/1:18:16:./.:.:.:.:.:.
chr13	114544603	HG2_PB_pbsv_14607	AGTTTCCTCCATATGCCTCAATTTCCTCCATACGCCCCCCAGTTTCTTCCATACACCCCACAGTTTCCTCCATATGCCC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_14607:HG2_PB_assemblyticsPBcR_7370:HG2_10X_allpass_2302;NumClusterSVs=3;ExactMatchIDs=HG2_PB_pbsv_14607;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0379747;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.139241;PBcalls=2;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=-14;DistForward=30;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=13:114544602-114544682;PctSeqSimilarity=0.9419;PctSizeSimilarity=1;PctRecOverlap=0.5443;SizeDiff=0;StartDistance=-36;EndDistance=-36;GTMatch=0;TruScore=82;MatchId=1065.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:11:./.:17:1:10:9:0/0:11:1:42:0:./.:8:0:./.:.:.:.:.:.
chr13	114561606	HG4_Ill_manta_3422	CTGTGTGTTTGTGACTGTATGTGTACATGTCTGTGTGTGCCTATGTATGCATGTCTG	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_7644:HG4_Ill_svaba_18153:HG4_Ill_scalpel_13395:HG4_Ill_manta_3422:HG4_Ill_Krunchall_20049:HG4_Ill_GATKHC_23178:HG4_Ill_GATKHCSBGrefine_10021:HG4_Ill_250bpfermikitraw_19122:HG4_Ill_150bpfermikitraw_18411:HG3_PB_assemblyticsfalcon_7655:HG2_Ill_svaba_18121:HG2_Ill_manta_4024:HG2_Ill_SpiralSDKrefine_4741:HG2_Ill_Krunchall_19726:HG2_Ill_GATKHC_23209:HG2_Ill_GATKHCSBGrefine_9705:HG2_Ill_250bpfermikitraw_19398:HG2_Ill_150bpfermikitraw_18277:HG2_PB_pbsv_14609:HG4_PB_pbsv_14568;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18277:HG2_Ill_250bpfermikitraw_19398:HG2_Ill_GATKHCSBGrefine_9705:HG2_Ill_GATKHC_23209:HG2_Ill_Krunchall_19726:HG2_Ill_SpiralSDKrefine_4741:HG2_Ill_manta_4024:HG2_Ill_svaba_18121:HG3_PB_assemblyticsfalcon_7655:HG4_Ill_150bpfermikitraw_18411:HG4_Ill_250bpfermikitraw_19122:HG4_Ill_GATKHCSBGrefine_10021:HG4_Ill_GATKHC_23178:HG4_Ill_Krunchall_20049:HG4_Ill_manta_3422:HG4_Ill_scalpel_13395:HG4_Ill_svaba_18153;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0917431;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.0917431;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=16505;DistForward=15841;DistMin=15841;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=13:114561605-114561670;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1066.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:23:0|1:31:4:1:17:./.:2:21:41:4:0/1:31:5:./.:.:.:.:.:.
chr13	114601802	HG3_Ill_SVrefine2DISCOVARDovetail_10403	ACTCCCGACCAGAGCAGCCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCACCGTCCTGGTGTCTGCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCACCGTCCTGGTGTCTGCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCACCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCACCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCACCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAACCGCCGTCCTGGTGTCTCCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCACCGTCCTGGTGTCTGCCATCAGAGGTAAGTGTGGTCTCCCGACCAGAGCAGCCACCGTCCTGGTGTCTGCCATCAGAGGTAAGTGTGGT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_14611:HG4_PB_pbsv_14570:HG3_Ill_MetaSV_1508:HG4_PB_SVrefine2PBcRDovetail_7268:HG3_PB_pbsv_14267:HG2_PB_SVrefine2PBcRplusDovetail_3140:HG4_PB_SVrefine2Falcon1Dovetail_8889:HG3_PB_SVrefine2PBcRDovetail_6890:HG3_Ill_SVrefine2DISCOVARDovetail_10403:HG2_PB_SVrefine2Falcon2Bionano_7291:HG2_PB_SVrefine2PB10Xhap12_10554:HG3_PB_SVrefine2Falcon1Dovetail_8845;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7291:HG3_Ill_SVrefine2DISCOVARDovetail_10403:HG3_PB_SVrefine2PBcRDovetail_6890:HG4_PB_SVrefine2Falcon1Dovetail_8889;NumExactMatchSVs=4;ClusterMaxShiftDist=0.26601;ClusterMaxSizeDiff=0.26601;ClusterMaxEditDist=0.278325;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-918;DistBack=-109;DistForward=-919;DistMin=-919;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=825;REFWIDENED=13:114601803-114603545;PctSeqSimilarity=0.9929;PctSizeSimilarity=1;PctRecOverlap=0.9793;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=99;MatchId=1067.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:38:0|1:39:2:1:28:./.:2:0:1:1:0/1:6:2:0/1:11:21:.:.:.
chr13	114604970	HG2_PB_SVrefine2Falcon2Bionano_7292	GTGTGTTGGGTGCACACAGTAGGTGCCCCATAAGTATCATAAGACCACAATGTGTTGGGTGCACACAGTAGGTGCCCCATAAGTATCATAAGACCACAATGTGTTGGGTGCACACAGTAGGTGCCCCATAAGTATCATAAGACCACAATGTGTTGGGTGCACACAGTAGGTGCCCCATAAGTATCATAAGACCACAA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3636:HG2_PB_pbsv_14612:HG3_PB_pbsv_14268:HG2_10X_SVrefine210Xhap12_10115:HG4_PB_SVrefine2Falcon1Dovetail_8890:HG3_PB_SVrefine2PBcRDovetail_6891:HG3_PB_SVrefine2Falcon1Dovetail_8846:HG3_Ill_SVrefine2DISCOVARDovetail_10404:HG3_Ill_250bpfermikitraw_18828:HG2_PB_SVrefine2PB10Xhap12_10556:HG2_PB_SVrefine2Falcon2Bionano_7292:HG2_PB_SVrefine2Falcon1plusDovetail_3333;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3636:HG4_PB_SVrefine2Falcon1Dovetail_8890:HG3_PB_SVrefine2PBcRDovetail_6891:HG3_PB_SVrefine2Falcon1Dovetail_8846:HG3_Ill_SVrefine2DISCOVARDovetail_10404:HG3_Ill_250bpfermikitraw_18828:HG2_PB_SVrefine2PB10Xhap12_10556:HG2_PB_SVrefine2Falcon2Bionano_7292:HG2_PB_SVrefine2Falcon1plusDovetail_3333;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0510204;ClusterMaxSizeDiff=0.0508906;ClusterMaxEditDist=0.0561224;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-196;DistBack=-148;DistForward=-196;DistMin=-196;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=193;REFWIDENED=13:114604971-114605359;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1068.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:56:31:0|1:43:1:2:24:./.:0:0:0:2:0/1:7:14:./.:.:.:.:.:.
chr13	114745592	HG3_Ill_GATKHCSBGrefine_9603	ACCACACAGATTCAATCACCTCCCACTGGGTCCCGCCCACCACACAGATTCAATCACCTCCCACCGGGTCCCG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_14271:HG2_PB_HySA_26582:HG3_Ill_GATKHC_23082:HG3_Ill_GATKHCSBGrefine_9603:HG2_Ill_GATKHC_23212:HG2_Ill_GATKHCSBGrefine_9711:HG2_PB_assemblyticsPBcR_7377:HG3_PB_assemblyticsfalcon_7663:HG2_PB_assemblyticsfalcon_7649:HG2_PB_pbsv_14616;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9711:HG2_Ill_GATKHC_23212:HG3_Ill_GATKHCSBGrefine_9603:HG3_Ill_GATKHC_23082;NumExactMatchSVs=4;ClusterMaxShiftDist=0.17931;ClusterMaxSizeDiff=0.17931;ClusterMaxEditDist=0.206897;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-72;DistBack=-23;DistForward=124;DistMin=-23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=347;REFWIDENED=13:114745524-114745942;PctSeqSimilarity=0.9778;PctSizeSimilarity=0.9474;PctRecOverlap=0.4545;SizeDiff=-4;StartDistance=42;EndDistance=38;GTMatch=0;TruScore=79;MatchId=1069.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:16:./.:9:19:10:2:./.:21:0:22:2:./.:14:2:./.:.:.:.:.:.
chr13	114848978	HG2_PB_SVrefine2Falcon1plusDovetail_3347	AGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCACGGGGAAGTGGTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCACGGGGAAGTGGTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCACGGGGAAGTGGTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCACGGGGAAGTGGTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCACGGGGAAGTGGTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCACGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCACGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGGTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCACGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCGTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGGGGAAGTGCTGAGTCTGGAGTATCGACTCCCTTCCTCCTCGCGGGGAAATCCCGG	A	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_8901:HG2_PB_pbsv_14640:HG2_PB_SVrefine2PBcRplusDovetail_3147:HG3_PB_pbsv_14294:HG4_PB_pbsv_14582:HG2_PB_pbsv_14639:HG3_PB_SVrefine2Falcon1Dovetail_8867:HG2_PB_SVrefine2Falcon1plusDovetail_3347:HG2_PB_SVrefine2PB10Xhap12_10573:HG2_PB_SVrefine2Falcon2Bionano_7306;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3347:HG3_PB_SVrefine2Falcon1Dovetail_8867;NumExactMatchSVs=2;ClusterMaxShiftDist=0.296967;ClusterMaxSizeDiff=0.296967;ClusterMaxEditDist=0.296967;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-1404;DistBack=2341;DistForward=-1397;DistMin=-1397;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=2193;REFWIDENED=13:114848979-114852575;PctSeqSimilarity=0.9829;PctSizeSimilarity=0.9993;PctRecOverlap=0.6875;SizeDiff=1;StartDistance=-439;EndDistance=-438;GTMatch=0;TruScore=88;MatchId=1071.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:46:./.:6:23:6:16:./.:2:0:4:0:0/0:15:0:0/1:6:28:.:.:.
chr13	114912826	HG2_PB_SVrefine2PB10Xhap12_10579	GCCCCAAGGAGAATCCTGAACCGACCCAGCCCCCAAGGAGAATCCAGAACCGACCCAGCCCCCGAGGAGAACCCAGAACCGACCCAGCCCCCGAGGAGAACCCAGAACCGACCCAGCCCCCGAGGAGATCCCAGAACCGACCCAGC	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10579:HG3_PB_pbsv_14302:HG2_PB_pbsv_14649:HG3_PB_SVrefine2PBcRDovetail_6905:HG3_PB_SVrefine2Falcon1Dovetail_8871:HG2_PB_SVrefine2Falcon1plusDovetail_3354:HG2_PB_SVrefine2PBcRplusDovetail_3151;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10579:HG2_PB_SVrefine2PBcRplusDovetail_3151;NumExactMatchSVs=2;ClusterMaxShiftDist=0.331429;ClusterMaxSizeDiff=0.331429;ClusterMaxEditDist=0.331429;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-145;DistBack=3644;DistForward=-134;DistMin=-134;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=493;REFWIDENED=13:114912827-114913464;PctSeqSimilarity=0.8746;PctSizeSimilarity=0.8333;PctRecOverlap=0.1029;SizeDiff=-29;StartDistance=-128;EndDistance=-157;GTMatch=0;TruScore=60;MatchId=1072.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:20:0|1:15:0:0:19:0/0:11:0:9:0:0/0:22:0:./.:.:.:.:.:.
chr13	114942349	HG3_Ill_250bpfermikitraw_18844	ATGGGTGGACAGCATGGGTGACAGCTGTGGGTGGACAGCTGTGGGTGACAGCCG	A	20	PASS	ClusterIDs=HG3_PB_HySA_22013:HG3_PB_pbsv_14304:HG2_PB_pbsv_14651:HG3_PB_assemblyticsfalcon_7693:HG3_Ill_Krunchall_19337:HG3_Ill_GATKHC_23101:HG3_Ill_GATKHCSBGrefine_9620:HG3_Ill_250bpfermikitraw_18844:HG3_Ill_150bpfermikitraw_18314;NumClusterSVs=9;ExactMatchIDs=HG3_Ill_150bpfermikitraw_18314:HG3_Ill_250bpfermikitraw_18844:HG3_Ill_GATKHCSBGrefine_9620:HG3_Ill_GATKHC_23101:HG3_Ill_Krunchall_19337:HG3_PB_assemblyticsfalcon_7693;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0186916;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0373832;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-53;DistBack=20446;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=63;REFWIDENED=13:114942348-114942466;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1073.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:23:0|1:21:5:1:21:./.:6:1:1:2:./.:0:0:./.:.:.:.:.:.
chr14	20680710	HG3_Ill_SVrefine2DISCOVARDovetail_10418	GCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGACAGCCACCCCGTCCGGGAGGGAGGTGAGGGGGTCAGCCCCCCGCCCAGCCAGCCGCCCCGTCCAGGAGGGAGGTGAGGGGGTCAGTCCCCCCGCCCAGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGTCCCCCGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGGTCAGTCCCCCCGCCCGGCCAGCCACCCCGTCCAGGAGGGAGGTGGGGGGGGTCAGTCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGTCCCCCCGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGTCCCCCCGCCCGGCCAGCAGCCCCGTCCAGGAGGGAGGTGGGGGGGGTCAGTCCCCCCGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGGTCAGTCCCCCCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3647:HG3_PB_SVrefine2Falcon1Dovetail_8887:HG3_PB_assemblyticsfalcon_7705:HG3_Ill_MetaSV_1522:HG2_Ill_MetaSV_1405:HG2_10X_allpass_2306:HG2_PB_pbsv_14674:HG3_PB_pbsv_14326:HG2_10X_SVrefine210Xhap12_10135:HG3_PB_SVrefine2PBcRDovetail_6920:HG3_Ill_SVrefine2DISCOVARDovetail_10418:HG2_PB_SVrefine2PB10Xhap12_10593:HG2_PB_SVrefine2Falcon1plusDovetail_3376;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3647:HG3_PB_SVrefine2PBcRDovetail_6920:HG3_Ill_SVrefine2DISCOVARDovetail_10418:HG2_PB_SVrefine2PB10Xhap12_10593:HG2_PB_SVrefine2Falcon1plusDovetail_3376;NumExactMatchSVs=5;ClusterMaxShiftDist=0.113659;ClusterMaxSizeDiff=0.113659;ClusterMaxEditDist=0.124138;PBcalls=7;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-492;DistBack=24470;DistForward=-461;DistMin=-461;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=114;REFWIDENED=14:20680711-20681316;PctSeqSimilarity=0.8547;PctSizeSimilarity=0.9776;PctRecOverlap=0.8093;SizeDiff=11;StartDistance=-94;EndDistance=-83;GTMatch=0;TruScore=88;MatchId=1074.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:18:0|1:42:1:2:19:./.:18:0:5:0:0/0:37:0:0/1:32:5:.:.:.
chr14	21536131	HG2_Ill_GATKHCSBGrefine_9743	TGGCTCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2100:HG2_10X_allpass_2307:HG4_Ill_MetaSV_1487:HG3_PB_assemblyticsfalcon_7720:HG3_Ill_Krunchall_19364:HG3_Ill_Spiral_15105:HG2_Ill_Spiral_966:HG4_PB_pbsv_14625:HG2_PB_SVrefine2PB10Xhap12_10604:HG2_PB_PB10Xdip_9554:HG4_PB_HySA_21324:HG4_Ill_MetaSV_1486:HG3_PB_HySA_22063:HG3_Ill_MetaSV_1523:HG2_Ill_tnscope_1603:HG4_PB_SVrefine2PBcRDovetail_7287:HG4_Ill_scalpel_13416:HG4_Ill_GATKHCSBGrefine_10044:HG4_10X_allpass_2698:HG3_PB_pbsv_14336:HG3_PB_SVrefine2PBcRDovetail_6926:HG3_PB_SVrefine2Falcon1Dovetail_8893:HG3_Ill_scalpel_13988:HG3_Ill_SVrefine2DISCOVARDovetail_10421:HG3_Ill_Krunchall_19363:HG3_Ill_GATKHCSBGrefine_9628:HG3_10X_allpass_2818:HG2_PB_pbsv_14686:HG2_PB_SVrefine2PBcRplusDovetail_3170:HG2_PB_SVrefine2PB10Xhap12_10603:HG2_PB_SVrefine2Falcon2Bionano_7321:HG2_PB_SVrefine2Falcon1plusDovetail_3382:HG2_Ill_scalpel_13744:HG2_Ill_MetaSV_1408:HG2_Ill_GATKHCSBGrefine_9743:HG2_10X_SVrefine210Xhap12_10139;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10139:HG2_Ill_GATKHCSBGrefine_9743:HG2_Ill_MetaSV_1408:HG2_Ill_scalpel_13744:HG2_PB_SVrefine2Falcon1plusDovetail_3382:HG2_PB_SVrefine2Falcon2Bionano_7321:HG2_PB_SVrefine2PB10Xhap12_10603:HG2_PB_SVrefine2PBcRplusDovetail_3170:HG2_PB_pbsv_14686:HG3_10X_allpass_2818:HG3_Ill_GATKHCSBGrefine_9628:HG3_Ill_Krunchall_19363:HG3_Ill_SVrefine2DISCOVARDovetail_10421:HG3_Ill_scalpel_13988:HG3_PB_SVrefine2Falcon1Dovetail_8893:HG3_PB_SVrefine2PBcRDovetail_6926:HG3_PB_pbsv_14336:HG4_10X_allpass_2698:HG4_Ill_GATKHCSBGrefine_10044:HG4_Ill_scalpel_13416:HG4_PB_SVrefine2PBcRDovetail_7287;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0394537;ClusterMaxSizeDiff=0.0394537;ClusterMaxEditDist=0.0394537;PBcalls=15;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=1645;DistForward=11900;DistMin=1645;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=14:21536132-21536470;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1075.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:./.:20:8:3:36:0|1:25:1:0:16:0/1:34:20:0/1:18:9:.:.:.
chr14	21778186	HG3_Ill_GATKHCSBGrefine_9629	GTGAGCCAAGATTGTGCCGCAGCACTCCAGCCTGGGCAACAGAGTGAGACTGTCTCAAAAACAAAAACGAAAACTTACCTCTCATATTTGCTACAAGGATTAAATGAGATAATATGTGTGAAATGATTATAATGATCATGATGTGGCAGGTAATGAAACACATAGTAACACATAGCAACTACTCAACTAATTATAGCTGTTGTTATGATCATTCTT	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2101:HG3_PB_pbsv_14339:HG3_Ill_Krunchall_19369:HG4_Ill_MetaSV_1488:HG3_PB_HySA_22065:HG2_PB_HySA_26693:HG2_Ill_MetaSV_1409:HG4_PB_pbsv_14627:HG4_PB_SVrefine2Falcon1Dovetail_8925:HG4_Ill_svaba_18189:HG4_Ill_manta_3427:HG4_Ill_GATKHCSBGrefine_10046:HG4_10X_allpass_2699:HG3_PB_SVrefine2PBcRDovetail_6929:HG3_PB_SVrefine2Falcon1Dovetail_8895:HG3_Ill_svaba_18318:HG3_Ill_scalpel_13990:HG3_Ill_manta_3280:HG3_Ill_SVrefine2DISCOVARDovetail_10425:HG3_Ill_GATKHCSBGrefine_9629:HG3_10X_allpass_2819:HG2_PB_assemblyticsfalcon_7701:HG2_PB_SVrefine2PBcRplusDovetail_3173:HG2_PB_SVrefine2PB10Xhap12_10608:HG2_PB_SVrefine2Falcon2Bionano_7324:HG2_PB_SVrefine2Falcon1plusDovetail_3383:HG2_Ill_svaba_18164:HG2_Ill_scalpel_13747:HG2_Ill_manta_4031:HG2_Ill_SVrefine2DISCOVARplusDovetail_3650:HG2_Ill_GATKHCSBGrefine_9745:HG2_10X_allpass_2308:HG2_10X_SVrefine210Xhap12_10144:HG4_PB_assemblyticsfalcon_7618:HG3_PB_assemblyticsfalcon_7724:HG2_PB_assemblyticsPBcR_7419:HG2_PB_pbsv_14688;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10144:HG2_10X_allpass_2308:HG2_Ill_GATKHCSBGrefine_9745:HG2_Ill_SVrefine2DISCOVARplusDovetail_3650:HG2_Ill_manta_4031:HG2_Ill_scalpel_13747:HG2_Ill_svaba_18164:HG2_PB_SVrefine2Falcon1plusDovetail_3383:HG2_PB_SVrefine2Falcon2Bionano_7324:HG2_PB_SVrefine2PB10Xhap12_10608:HG2_PB_SVrefine2PBcRplusDovetail_3173:HG2_PB_assemblyticsfalcon_7701:HG3_10X_allpass_2819:HG3_Ill_GATKHCSBGrefine_9629:HG3_Ill_SVrefine2DISCOVARDovetail_10425:HG3_Ill_manta_3280:HG3_Ill_scalpel_13990:HG3_Ill_svaba_18318:HG3_PB_SVrefine2Falcon1Dovetail_8895:HG3_PB_SVrefine2PBcRDovetail_6929:HG4_10X_allpass_2699:HG4_Ill_GATKHCSBGrefine_10046:HG4_Ill_manta_3427:HG4_Ill_svaba_18189:HG4_PB_SVrefine2Falcon1Dovetail_8925:HG4_PB_pbsv_14627;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0232019;ClusterMaxSizeDiff=0.0232019;ClusterMaxEditDist=0.0232019;PBcalls=16;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-215;DistBack=-125;DistForward=2919;DistMin=-125;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=14:21778187-21778402;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1076.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:40:1/1:1:13:2:19:1/1:0:23:0:15:1/1:0:32:./.:.:.:.:.:.
chr14	22105400	HG3_Ill_150bpfermikitraw_18342	TATATATATATATATATATATATATATATATATATATACACACATATACATATATATATATATATATATACAC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_14341:HG3_Ill_manta_3281:HG3_Ill_Krunchall_19370:HG3_Ill_GATKHC_23132:HG3_Ill_GATKHCSBGrefine_9631:HG3_Ill_250bpfermikitraw_18874:HG3_Ill_150bpfermikitraw_18342:HG2_Ill_Krunchall_19777:HG2_Ill_GATKHC_23271:HG2_Ill_GATKHCSBGrefine_9747:HG2_Ill_250bpfermikitraw_19445:HG2_Ill_150bpfermikitraw_18318:HG2_PB_pbsv_14691;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18318:HG2_Ill_250bpfermikitraw_19445:HG2_Ill_GATKHCSBGrefine_9747:HG2_Ill_GATKHC_23271:HG2_Ill_Krunchall_19777:HG3_Ill_150bpfermikitraw_18342:HG3_Ill_250bpfermikitraw_18874:HG3_Ill_GATKHCSBGrefine_9631:HG3_Ill_GATKHC_23132:HG3_Ill_Krunchall_19370:HG3_Ill_manta_3281;NumExactMatchSVs=11;ClusterMaxShiftDist=0.041958;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.125874;PBcalls=2;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-72;DistBack=-27;DistForward=-19;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5404;REFWIDENED=14:22095651-22110856;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1078.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:36:./.:11:12:6:18:./.:5:1:1:8:0/1:27:18:./.:.:.:.:.:.
chr14	22881666	HG3_Ill_manta_3283	AGAAAGGTGTTTCACCATCAGTTCTAATAATAGCATGTGGCAGCTGCACTTCTGGTCCTTCCTCTGCATTTTAATCCCATTATTTTCTAAGCCTCTCCCAAGGCCTCCTTTACCAGTCAAAATCAGCCAAGGTTTCATATGCCCTTAGAAGAAAAGAGGACTGATAGAACCTAAGTATCAACTAGAGAAAAGCCAAGAGCTTTTCGTGCTGGATGATCCGTCTGAGTCCGGGTTCCTGATTGCCACACAGGGAGGCCCTGACTATAGTGTGGACATTGGTTCCTTTGCATAGCTCCCTCTTGTGTATACACAGAGGCTGCTTTTTCTCATCTTGTTTGCCCTAAAACATTTTTTGACTTAGCCTCCACATACTTGAAACTTAGAGTTTAACCTGTCAAAATCAGAGGGAAATTGACTGAATTGCATCTCTTTCACGAAAACAAACATCTTCCAACTGCCATGGCATTTTAGACTGCCCTTTCTGCTAGTGTTGCTTCCCTATTGCATTTCCCTGGATAAACATCTAGTTTGTGCCATAATATTTATTAACAAGGAGTCCTCTGGGCAGACGGTGGCATTAGGAATTTCTGCTTG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_14345:HG4_PB_pbsv_14632:HG4_PB_SVrefine2PBcRDovetail_7293:HG4_PB_SVrefine2Falcon1Dovetail_8929:HG4_Ill_manta_3428:HG4_Ill_SVrefine2DISCOVARDovetail_10308:HG4_Ill_MetaSV_1490:HG4_10X_allpass_2700:HG3_PB_SVrefine2PBcRDovetail_6932:HG3_PB_SVrefine2Falcon1Dovetail_8899:HG3_Ill_manta_3283:HG3_Ill_SVrefine2DISCOVARDovetail_10429:HG3_10X_allpass_2820:HG2_PB_pbsv_14694:HG2_PB_assemblyticsfalcon_7710:HG2_PB_SVrefine2PBcRplusDovetail_3177:HG2_PB_SVrefine2Falcon2Bionano_7328:HG2_PB_SVrefine2Falcon1plusDovetail_3387:HG2_Ill_SpiralSDKrefine_4788:HG2_Ill_SVrefine2DISCOVARplusDovetail_3655:HG2_10X_allpass_2309:HG2_10X_SVrefine210Xhap12_10148:HG4_Ill_Krunchall_20097:HG2_PB_SVrefine2PB10Xhap12_10612:HG2_Ill_Krunchall_19784:HG4_PB_assemblyticsfalcon_7625:HG3_PB_assemblyticsfalcon_7731:HG2_PB_assemblyticsPBcR_7430:HG3_Ill_MetaSV_1527:HG2_Ill_tnscope_1604:HG4_Ill_Cortex_1025:HG3_Ill_Cortex_1073:HG2_Ill_Cortex_2476;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10148:HG2_10X_allpass_2309:HG2_Ill_SVrefine2DISCOVARplusDovetail_3655:HG2_Ill_SpiralSDKrefine_4788:HG2_PB_SVrefine2Falcon1plusDovetail_3387:HG2_PB_SVrefine2Falcon2Bionano_7328:HG2_PB_SVrefine2PBcRplusDovetail_3177:HG2_PB_assemblyticsfalcon_7710:HG2_PB_pbsv_14694:HG3_10X_allpass_2820:HG3_Ill_SVrefine2DISCOVARDovetail_10429:HG3_Ill_manta_3283:HG3_PB_SVrefine2Falcon1Dovetail_8899:HG3_PB_SVrefine2PBcRDovetail_6932:HG4_10X_allpass_2700:HG4_Ill_MetaSV_1490:HG4_Ill_SVrefine2DISCOVARDovetail_10308:HG4_Ill_manta_3428:HG4_PB_SVrefine2Falcon1Dovetail_8929:HG4_PB_SVrefine2PBcRDovetail_7293:HG4_PB_pbsv_14632;NumExactMatchSVs=21;ClusterMaxShiftDist=0.010101;ClusterMaxSizeDiff=0.010101;ClusterMaxEditDist=0.010101;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-593;DistBack=-1;DistForward=-592;DistMin=-592;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=14:22881667-22882260;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1079.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:29:0|1:45:0:0:38:0|1:75:0:0:22:0/1:69:18:0/1:52:12:.:.:.
chr14	23505496	HG3_Ill_250bpfermikitraw_18885	GTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCCGGCCTCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTGGCCACGCTGGTCTCAAACTCTTGACCTCAGGTGATCCGCT	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1414:HG2_PB_pbsv_14699:HG4_PB_pbsv_14638:HG4_PB_SVrefine2PBcRDovetail_7297:HG4_PB_SVrefine2Falcon1Dovetail_8932:HG4_Ill_SVrefine2DISCOVARDovetail_10315:HG4_10X_allpass_2702:HG3_Ill_SVrefine2DISCOVARDovetail_10431:HG3_Ill_250bpfermikitraw_18885:HG3_10X_allpass_2822:HG2_PB_SVrefine2PBcRplusDovetail_3182:HG2_PB_SVrefine2PB10Xhap12_10617:HG2_PB_SVrefine2Falcon2Bionano_7332:HG2_PB_SVrefine2Falcon1plusDovetail_3392:HG2_Ill_SVrefine2DISCOVARplusDovetail_3660:HG2_10X_allpass_2310:HG2_Ill_SVrefine2DISCOVARplusDovetail_3659:HG4_Ill_MetaSV_1492;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_2310:HG2_Ill_SVrefine2DISCOVARplusDovetail_3660:HG2_PB_SVrefine2Falcon1plusDovetail_3392:HG2_PB_SVrefine2Falcon2Bionano_7332:HG2_PB_SVrefine2PB10Xhap12_10617:HG2_PB_SVrefine2PBcRplusDovetail_3182:HG3_10X_allpass_2822:HG3_Ill_250bpfermikitraw_18885:HG3_Ill_SVrefine2DISCOVARDovetail_10431:HG4_10X_allpass_2702:HG4_Ill_SVrefine2DISCOVARDovetail_10315:HG4_PB_SVrefine2Falcon1Dovetail_8932:HG4_PB_SVrefine2PBcRDovetail_7297;NumExactMatchSVs=13;ClusterMaxShiftDist=0.178313;ClusterMaxSizeDiff=0.178313;ClusterMaxEditDist=0.178313;PBcalls=8;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-190;DistBack=1;DistForward=-46;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=192;REFWIDENED=14:23505497-23505878;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1080.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:0:14:1:20:./.:0:1:0:2:1/1:0:10:./.:.:.:.:.:.
chr14	23702029	HG2_PB_assemblyticsfalcon_7718	GTCTGGGAGGTGGGGGTGCCTCTGCCCAGCTGCCCCGTCTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10618:HG4_Ill_svaba_18204:HG2_Ill_svaba_18176:HG4_PB_pbsv_14639:HG2_PB_pbsv_14700:HG2_PB_HySA_26706:HG4_Ill_svaba_18203:HG4_Ill_GATKHC_23239:HG3_PB_pbsv_14351:HG3_Ill_svaba_18326:HG3_Ill_scalpel_13998:HG3_Ill_GATKHC_23143:HG2_PB_assemblyticsfalcon_7718:HG2_Ill_svaba_18175:HG2_Ill_scalpel_13759:HG2_Ill_GATKHC_23283:HG2_Ill_GATKHCSBGrefine_9753;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9753:HG2_Ill_GATKHC_23283:HG2_Ill_scalpel_13759:HG2_Ill_svaba_18175:HG2_PB_assemblyticsfalcon_7718:HG3_Ill_GATKHC_23143:HG3_Ill_scalpel_13998:HG3_Ill_svaba_18326:HG3_PB_pbsv_14351:HG4_Ill_GATKHC_23239:HG4_Ill_svaba_18203;NumExactMatchSVs=11;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.107383;PBcalls=6;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-76;DistBack=10563;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=33;REFWIDENED=14:23702008-23702116;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1081.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:21:0|1:30:1:1:22:1|0:0:11:20:0:0/1:24:7:./.:.:.:.:.:.
chr14	23922246	HG2_PB_SVrefine2Falcon2Bionano_7333	CATGGTTATAGTGATACCTATATAGAGTCATAATTGGTAATTAAATTGAAATACTTATTATTTTAATTTAATAAATATAACATTTTTATAGTTGAAAAATAAGTATGTACAAAATGTTTTAGTTTAAAACGAAGGCATGTTACTAACATAGAATCTAGTGGGAACACTTCTGATTGTGAACACTCCAACATGTAAAGAGATTATAAGTCGGTCACTCTCATTCTCAAAGCAAGAAGAAAGCTGAACTGAAAACCTACAACTTTTCTTAGTTCTATCAGAGAATTTTGGCTACAGGACAAACTATCACCCTGAAAACTGGAGAGACGGGTGAATACGGAGAATACAAGCCAGCTTACCTGAAGCAGGAGGTGCTGGAACCAGTAACTGACAGGAACACCTAA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_14640:HG2_PB_assemblyticsfalcon_7720:HG4_PB_assemblyticsfalcon_7634:HG3_PB_assemblyticsfalcon_7739:HG2_PB_assemblyticsPBcR_7440:HG4_Ill_Krunchall_20104:HG3_Ill_Krunchall_19379:HG2_Ill_Krunchall_19790:HG2_PB_HySA_26710:HG3_Ill_MetaSV_1529:HG2_Ill_tnscope_1605:HG2_Ill_MetaSV_1415:HG4_PB_SVrefine2PBcRDovetail_7298:HG4_PB_SVrefine2Falcon1Dovetail_8933:HG4_Ill_scalpel_13436:HG4_Ill_manta_3432:HG4_Ill_SVrefine2DISCOVARDovetail_10317:HG4_Ill_GATKHCSBGrefine_10055:HG4_Ill_Cortex_1026:HG4_10X_allpass_2703:HG3_PB_pbsv_14353:HG3_PB_SVrefine2PBcRDovetail_6939:HG3_PB_SVrefine2Falcon1Dovetail_8905:HG3_PB_HySA_22076:HG3_Ill_manta_3286:HG3_Ill_SVrefine2DISCOVARDovetail_10432:HG3_Ill_GATKHCSBGrefine_9640:HG3_Ill_Cortex_1074:HG3_10X_allpass_2823:HG2_PB_pbsv_14702:HG2_PB_SVrefine2PBcRplusDovetail_3184:HG2_PB_SVrefine2PB10Xhap12_10621:HG2_PB_SVrefine2Falcon2Bionano_7333:HG2_PB_SVrefine2Falcon1plusDovetail_3394:HG2_Ill_scalpel_13760:HG2_Ill_manta_4032:HG2_Ill_SpiralSDKrefine_4791:HG2_Ill_SVrefine2DISCOVARplusDovetail_3663:HG2_Ill_GATKHCSBGrefine_9754:HG2_Ill_Cortex_2485:HG2_10X_allpass_2311:HG2_Ill_breakscan11_2102;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_2311:HG2_Ill_Cortex_2485:HG2_Ill_GATKHCSBGrefine_9754:HG2_Ill_SVrefine2DISCOVARplusDovetail_3663:HG2_Ill_SpiralSDKrefine_4791:HG2_Ill_manta_4032:HG2_Ill_scalpel_13760:HG2_PB_SVrefine2Falcon1plusDovetail_3394:HG2_PB_SVrefine2Falcon2Bionano_7333:HG2_PB_SVrefine2PB10Xhap12_10621:HG2_PB_SVrefine2PBcRplusDovetail_3184:HG2_PB_pbsv_14702:HG3_10X_allpass_2823:HG3_Ill_Cortex_1074:HG3_Ill_GATKHCSBGrefine_9640:HG3_Ill_SVrefine2DISCOVARDovetail_10432:HG3_Ill_manta_3286:HG3_PB_HySA_22076:HG3_PB_SVrefine2Falcon1Dovetail_8905:HG3_PB_SVrefine2PBcRDovetail_6939:HG3_PB_pbsv_14353:HG4_10X_allpass_2703:HG4_Ill_Cortex_1026:HG4_Ill_GATKHCSBGrefine_10055:HG4_Ill_SVrefine2DISCOVARDovetail_10317:HG4_Ill_manta_3432:HG4_Ill_scalpel_13436:HG4_PB_SVrefine2Falcon1Dovetail_8933:HG4_PB_SVrefine2PBcRDovetail_7298;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0225564;ClusterMaxSizeDiff=0.0225564;ClusterMaxEditDist=0.0250941;PBcalls=17;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-400;DistBack=-401;DistForward=14005;DistMin=-401;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=14:23922247-23922651;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1082.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:58:1/1:1:7:0:30:1/1:0:23:0:16:1/1:0:44:0/1:2:16:.:.:.
chr14	24394552	HG3_Ill_150bpfermikitraw_18353	CGAAATCTAAAACACAAATTCCATCCCCGCCCCCGCCCCGCTGTCAAGGACCTT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3666:HG4_PB_HySA_21344:HG2_PB_pbsv_14705:HG3_PB_pbsv_14356:HG4_PB_pbsv_14643:HG2_PB_HySA_26715:HG4_PB_assemblyticsfalcon_7639:HG4_Ill_svaba_18211:HG4_Ill_scalpel_13440:HG4_Ill_Krunchall_20111:HG4_Ill_GATKHC_23247:HG4_Ill_GATKHCSBGrefine_10058:HG4_Ill_Cortex_1027:HG4_Ill_250bpfermikitraw_19188:HG4_Ill_150bpfermikitraw_18474:HG3_Ill_svaba_18332:HG3_Ill_scalpel_14002:HG3_Ill_Krunchall_19384:HG3_Ill_GATKHC_23149:HG3_Ill_GATKHCSBGrefine_9643:HG3_Ill_Cortex_1075:HG3_Ill_250bpfermikitraw_18890:HG3_Ill_150bpfermikitraw_18353:HG2_PB_assemblyticsfalcon_7724:HG2_Ill_svaba_18183:HG2_Ill_scalpel_13765:HG2_Ill_manta_4034:HG2_Ill_SpiralSDKrefine_4795:HG2_Ill_Krunchall_19796:HG2_Ill_GATKHC_23290:HG2_Ill_GATKHCSBGrefine_9756:HG2_Ill_Cortex_2487:HG2_Ill_250bpfermikitraw_19460:HG2_Ill_150bpfermikitraw_18335:HG3_PB_assemblyticsfalcon_7745:HG3_PB_HySA_22081:HG4_PB_SVrefine2PBcRDovetail_7300:HG4_Ill_SVrefine2DISCOVARDovetail_10319:HG3_PB_SVrefine2PBcRDovetail_6942:HG3_Ill_SVrefine2DISCOVARDovetail_10437:HG2_PB_SVrefine2PBcRplusDovetail_3186:HG2_PB_SVrefine2PB10Xhap12_10623:HG2_PB_SVrefine2Falcon2Bionano_7335;NumClusterSVs=43;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18335:HG2_Ill_250bpfermikitraw_19460:HG2_Ill_Cortex_2487:HG2_Ill_GATKHCSBGrefine_9756:HG2_Ill_GATKHC_23290:HG2_Ill_Krunchall_19796:HG2_Ill_SpiralSDKrefine_4795:HG2_Ill_manta_4034:HG2_Ill_scalpel_13765:HG2_Ill_svaba_18183:HG2_PB_assemblyticsfalcon_7724:HG3_Ill_150bpfermikitraw_18353:HG3_Ill_250bpfermikitraw_18890:HG3_Ill_Cortex_1075:HG3_Ill_GATKHCSBGrefine_9643:HG3_Ill_GATKHC_23149:HG3_Ill_Krunchall_19384:HG3_Ill_scalpel_14002:HG3_Ill_svaba_18332:HG4_Ill_150bpfermikitraw_18474:HG4_Ill_250bpfermikitraw_19188:HG4_Ill_Cortex_1027:HG4_Ill_GATKHCSBGrefine_10058:HG4_Ill_GATKHC_23247:HG4_Ill_Krunchall_20111:HG4_Ill_scalpel_13440:HG4_Ill_svaba_18211;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0550459;ClusterMaxSizeDiff=0.0550459;ClusterMaxEditDist=0.0733945;PBcalls=14;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=26;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=13;NumTechs=2;NumTechsExact=2;SVLEN=-53;DistBack=25080;DistForward=-31;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=53;REFWIDENED=14:24394523-24394628;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1083.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:73:1/1:1:44:0:33:1/1:0:13:0:13:1/1:0:36:./.:.:.:.:.:.
chr14	24833768	HG3_PB_pbsv_14361	AGTATATATATAGTATATCTGTGTATATGCTATATAGTATAGTGTATAGTATATCTGTGTATATATAGTATATCTGTACATATATACATATAT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10627:HG2_PB_pbsv_14712:HG3_PB_pbsv_14361:HG4_PB_assemblyticsfalcon_7644:HG4_PB_SVrefine2Falcon1Dovetail_8940:HG4_Ill_GATKHCSBGrefine_10062;NumClusterSVs=6;ExactMatchIDs=HG3_PB_pbsv_14361;NumExactMatchSVs=1;ClusterMaxShiftDist=0.120219;ClusterMaxSizeDiff=0.120219;ClusterMaxEditDist=0.120219;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-92;DistBack=-172;DistForward=-60;DistMin=-172;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=267;REFWIDENED=14:24833742-24834100;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9892;PctRecOverlap=0.8936;SizeDiff=-1;StartDistance=10;EndDistance=9;GTMatch=0;TruScore=95;MatchId=1084.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:24:2:4:22:./.:19:1:5:9:0/1:38:17:./.:.:.:.:.:.
chr14	24932619	HG2_Ill_manta_4035	CCTATCAAAAGGTAGAGCGTATGTACTTTCCCTTCAAGTCCAGATGGGTATTTATGACTGCCTCAAGTGATGTAACTTCCAAGACTAGGTTATAAAAATGCCACACACTTCGAACTTGTTTTCTTGAAATGTTCACTTTTAGAACCACCCATCATGCTATGAGAA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10628:HG2_PB_SVrefine2PB10Xhap12_10629:HG2_PB_PB10Xdip_9583:HG2_PB_PB10Xdip_9584:HG4_PB_HySA_21354:HG4_Ill_MetaSV_1496:HG2_PB_HySA_26719:HG4_PB_assemblyticsfalcon_7645:HG3_PB_assemblyticsfalcon_7750:HG4_PB_SVrefine2PBcRDovetail_7304:HG4_PB_SVrefine2Falcon1Dovetail_8941:HG4_Ill_svaba_18214:HG4_Ill_scalpel_13442:HG4_Ill_manta_3434:HG4_Ill_GATKHCSBGrefine_10063:HG4_Ill_150bpfermikitraw_18478:HG4_CG_vcfBeta_9225:HG4_10X_allpass_2704:HG3_PB_SVrefine2Falcon1Dovetail_8909:HG2_PB_assemblyticsfalcon_7729:HG2_PB_SVrefine2Falcon1plusDovetail_3396:HG2_Ill_svaba_18186:HG2_Ill_manta_4035:HG2_Ill_MetaSV_1418:HG2_Ill_GATKHCSBGrefine_9760:HG2_10X_allpass_2312:HG2_Ill_Krunchall_19799:HG4_Ill_Spiral_1128:HG4_PB_pbsv_14652:HG2_PB_pbsv_14713;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_2312:HG2_Ill_GATKHCSBGrefine_9760:HG2_Ill_MetaSV_1418:HG2_Ill_manta_4035:HG2_Ill_svaba_18186:HG2_PB_SVrefine2Falcon1plusDovetail_3396:HG2_PB_assemblyticsfalcon_7729:HG3_PB_SVrefine2Falcon1Dovetail_8909:HG4_10X_allpass_2704:HG4_CG_vcfBeta_9225:HG4_Ill_150bpfermikitraw_18478:HG4_Ill_GATKHCSBGrefine_10063:HG4_Ill_manta_3434:HG4_Ill_scalpel_13442:HG4_Ill_svaba_18214:HG4_PB_SVrefine2Falcon1Dovetail_8941:HG4_PB_SVrefine2PBcRDovetail_7304;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0697674;ClusterMaxSizeDiff=0.0697674;ClusterMaxEditDist=0.0697674;PBcalls=15;Illcalls=12;TenXcalls=2;CGcalls=1;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=1;HG2count=14;HG3count=2;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-164;DistBack=-1;DistForward=-158;DistMin=-158;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=14:24932620-24932783;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1085.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:31:./.:35:19:6:7:1|0:0:23:42:0:0/1:52:18:./.:.:.:.:.:.
chr14	26005796	HG3_PB_SVrefine2Falcon1Dovetail_8913	ACCACAGGGCTTTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCACAAGTAGCTGGGACTACAGACGCCCACCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10153:HG2_Ill_Krunchall_19808:HG4_PB_assemblyticsfalcon_7653:HG3_PB_assemblyticsfalcon_7758:HG2_Ill_Krunchall_19807:HG2_PB_assemblyticsPBcR_7455:HG2_PB_assemblyticsfalcon_7737:HG2_PB_pbsv_14718:HG2_PB_HySA_26729:HG4_PB_pbsv_14658:HG4_PB_SVrefine2PBcRDovetail_7308:HG4_PB_SVrefine2Falcon1Dovetail_8945:HG4_Ill_manta_3436:HG4_Ill_SVrefine2DISCOVARDovetail_10326:HG4_Ill_MetaSV_1499:HG4_Ill_GATKHCSBGrefine_10067:HG3_PB_SVrefine2Falcon1Dovetail_8913:HG2_PB_SVrefine2PBcRplusDovetail_3193:HG2_PB_SVrefine2PB10Xhap12_10633:HG2_PB_SVrefine2Falcon1plusDovetail_3400:HG2_Ill_scalpel_13776:HG2_Ill_breakscan11_2104:HG2_Ill_MetaSV_1419:HG2_Ill_GATKHCSBGrefine_9763;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10153:HG4_PB_pbsv_14658:HG4_PB_SVrefine2PBcRDovetail_7308:HG4_PB_SVrefine2Falcon1Dovetail_8945:HG4_Ill_manta_3436:HG4_Ill_SVrefine2DISCOVARDovetail_10326:HG4_Ill_MetaSV_1499:HG4_Ill_GATKHCSBGrefine_10067:HG3_PB_SVrefine2Falcon1Dovetail_8913:HG2_PB_SVrefine2PBcRplusDovetail_3193:HG2_PB_SVrefine2PB10Xhap12_10633:HG2_PB_SVrefine2Falcon1plusDovetail_3400:HG2_Ill_scalpel_13776:HG2_Ill_breakscan11_2104:HG2_Ill_MetaSV_1419:HG2_Ill_GATKHCSBGrefine_9763;NumExactMatchSVs=16;ClusterMaxShiftDist=0.126789;ClusterMaxSizeDiff=0.126789;ClusterMaxEditDist=0.126789;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-251;DistBack=16553;DistForward=40796;DistMin=16553;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=14:26005797-26006063;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1086.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:45:0|1:23:0:1:43:1|0:0:20:40:0:0/1:33:14:./.:.:.:.:.:.
chr14	26701607	HG2_Ill_manta_4036	TGAAAGAAAGAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10156:HG4_PB_pbsv_14661:HG4_Ill_Krunchall_20130:HG3_Ill_Krunchall_19400:HG2_PB_pbsv_14721:HG2_Ill_Krunchall_19814:HG4_PB_assemblyticsfalcon_7659:HG3_PB_assemblyticsfalcon_7766:HG2_PB_assemblyticsPBcR_7463:HG2_PB_assemblyticsfalcon_7743:HG2_PB_HySA_26741:HG3_PB_pbsv_14367:HG4_Ill_MetaSV_1501:HG3_Ill_MetaSV_1531:HG2_Ill_tnscope_1606:HG2_Ill_MetaSV_1420:HG4_PB_SVrefine2Falcon1Dovetail_8948:HG4_PB_HySA_21368:HG4_Ill_manta_3437:HG4_Ill_SVrefine2DISCOVARDovetail_10331:HG4_Ill_GATKHCSBGrefine_10069:HG4_10X_allpass_2707:HG3_PB_SVrefine2Falcon1Dovetail_8917:HG3_Ill_scalpel_14018:HG3_Ill_manta_3289:HG3_Ill_SVrefine2DISCOVARDovetail_10449:HG3_Ill_GATKHCSBGrefine_9647:HG2_PB_SVrefine2PBcRplusDovetail_3195:HG2_PB_SVrefine2PB10Xhap12_10637:HG2_PB_SVrefine2Falcon2Bionano_7343:HG2_PB_SVrefine2Falcon1plusDovetail_3403:HG2_Ill_scalpel_13783:HG2_Ill_manta_4036:HG2_Ill_SVrefine2DISCOVARplusDovetail_3680:HG2_Ill_GATKHCSBGrefine_9765:HG2_10X_allpass_2313;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10156:HG4_PB_SVrefine2Falcon1Dovetail_8948:HG4_PB_HySA_21368:HG4_Ill_manta_3437:HG4_Ill_SVrefine2DISCOVARDovetail_10331:HG4_Ill_GATKHCSBGrefine_10069:HG4_10X_allpass_2707:HG3_PB_SVrefine2Falcon1Dovetail_8917:HG3_Ill_scalpel_14018:HG3_Ill_manta_3289:HG3_Ill_SVrefine2DISCOVARDovetail_10449:HG3_Ill_GATKHCSBGrefine_9647:HG2_PB_SVrefine2PBcRplusDovetail_3195:HG2_PB_SVrefine2PB10Xhap12_10637:HG2_PB_SVrefine2Falcon2Bionano_7343:HG2_PB_SVrefine2Falcon1plusDovetail_3403:HG2_Ill_scalpel_13783:HG2_Ill_manta_4036:HG2_Ill_SVrefine2DISCOVARplusDovetail_3680:HG2_Ill_GATKHCSBGrefine_9765:HG2_10X_allpass_2313;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0684039;ClusterMaxSizeDiff=0.0684039;ClusterMaxEditDist=0.0684039;PBcalls=15;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=68659;DistForward=-301;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=14:26701608-26701929;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1087.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:82:1/1:8:44:1:36:1/1:0:18:0:15:1/1:0:38:./.:2:13:.:.:.
chr14	28537232	HG3_Ill_GATKHCSBGrefine_9652	TTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_14669:HG2_PB_assemblyticsfalcon_7766:HG2_PB_SVrefine2Falcon1plusDovetail_3406:HG4_Ill_GATKHCSBGrefine_10075:HG2_PB_HySA_26768:HG4_Ill_svaba_18247:HG3_Ill_GATKHCSBGrefine_9652:HG2_Ill_GATKHCSBGrefine_9771:HG4_PB_SVrefine2PBcRDovetail_7310:HG4_PB_assemblyticsfalcon_7678:HG3_PB_assemblyticsfalcon_7780:HG2_PB_assemblyticsPBcR_7485:HG3_PB_pbsv_14374:HG2_PB_pbsv_14729;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9771:HG3_Ill_GATKHCSBGrefine_9652:HG4_Ill_svaba_18247;NumExactMatchSVs=3;ClusterMaxShiftDist=0.229885;ClusterMaxSizeDiff=0.229885;ClusterMaxEditDist=0.229885;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-96;DistBack=13670;DistForward=4918;DistMin=4918;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=39;REFWIDENED=14:28537233-28537367;PctSeqSimilarity=0.957;PctSizeSimilarity=0.9167;PctRecOverlap=0.9175;SizeDiff=8;StartDistance=0;EndDistance=8;GTMatch=0;TruScore=93;MatchId=1088.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:2:28:0:18:1/1:0:8:0:12:1/1:0:14:./.:.:.:.:.:.
chr14	28869843	HG4_PB_SVrefine2Falcon1Dovetail_8950	TTTTTTTTTTTTTTTTTTTTTTTCTGAAAATAAATGTAGAATGGGTTTTGACATTATTTTATTTGGAAATTAAAGCTAAAACAGAACCCAAATCTCCTGACTTCCATTACAGTAGTTTGCCTGAGGTTGCAAAAGGGTCTAATAAGGAAGATCTGTACTACGCTTTTTGACAACACATTGAAGACACAGATCATAGCACTATGGCTCAAGATTATAATACCAAATATACGCAACAGAGACAGGTGCTACTCATCCTTACACTTCTCCTGCTCTTTCTTTTATTTATTTATTTTTTAAATATGAACATGTGTCACAATTTCCTGTCACGAGAGAGGCAGCCCTCTTGACACTTTCCTCTGTGGCTCCATTAGCTGCTTCCATCTCACCACTAAGGATGTGGAAGGAGCCATGGAAACTCTCATCCTGGAGCCCACAGGTCCCTTCCTAGGCCTGGCTCACTGTAAAGTATGGGGGTACCATGATTACAAAAGGGGTGTGCTTCTGAGGCCAGGTAGATTTGGTGCCTTCTAGAACTCTATGTGCTCTCACACAGGTGATGAGATACCTGCTGCTTTTCAGAGAACTTGATTGCAATGGCTGGGTGGGAGAGGTATGAACAGAGATGGGTTCGCCCTGGGGGAGAGAATGGACAGAAGTGGGTTCACCCAAGGACCAAGATGGGCTGGCCCCAGAAGAGTGCAGACAGATAAGAGAAGGGCTCCACATGGGGTTTTAGGCCCACAAGGTCTCATGACCTGCCAGGGCCTGGGGCCAGGGACCACTAGGGCTCATGTCCAACTGTGCAGCTGCTCCTGGGGGCCCTTGGCCATTGGCAACCCCTAAGCCACCTCCCCATGATGTGTGGCCTACCCCCCATCCTTTATTTCTTTCTTTTCTCCCACCACCACAAATTTGCAGTGGAGCTTCCTATATTTGGGAAAATGGCAGGGGTCAGCACAATCAGAGGGCTAATCCTCGTCCTGGGAAAACCATGGTATCTCCCCTGCCAGGCAAATATTGCTCACTCTTAACTGTCATGGTACACGCAGCAGCCAGGCAGCTGACATAAAGCCACTCTGGTGTCTGCGTCCTCTTGGGGTCTTAGGATTCTCACAGGAACTCACTCTAGCCAAAGTTTTAGCACAACATTTCAGAAGCGGCTATTTTCTGGCCTGGCAGATATGATCCGTGCAGTGTTTTTTTCTAACCATTTTAAGCTCATGGAATGTTTCAGGATGGCCCACTGTGATGATGACTGATGGCTAGTCACTTTTGTAATGGAAACTGGGTCCCCTGTGCACTGGCTTAGCCCCATTAACATTTCTCAACCCTCCGTTGGATAGATTACTGACTCTTTTCATAAGCTTTCTGACCTTGTCTTTTTTTTTTTTTTTCTTATATCCCTTTATTAAATACACACACATACTTGCTCAAAATGGTAGCAATTATTTATATCAGTAGTTCTCAGCTGGGCATGATTTTGCCGCCAATGGACATTTGGCAATATTTGAAGGCAGTTTTACTTGTTACAGCTGGGAGGCACTACTGGTATCTAGTAAACTGAGGCTCTGCTACATATCTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGCTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGTGATAGTTTACTGAGAATGATGCTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCGACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTCGTGTGAGATGATAC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1607:HG3_10X_allpass_2825:HG2_PB_assemblyticsfalcon_7767:HG2_PB_assemblyticsPBcR_7486:HG2_10X_allpass_2314:HG4_10X_allpass_2708:HG3_Ill_Krunchall_19415:HG2_Ill_Krunchall_19839:HG4_PB_pbsv_14670:HG4_PB_SVrefine2Falcon1Dovetail_8950:HG4_Ill_SVrefine2DISCOVARDovetail_10338:HG4_Ill_MetaSV_1504:HG4_Ill_GATKHCSBGrefine_10076:HG3_PB_SVrefine2Falcon1Dovetail_8918:HG3_Ill_SVrefine2DISCOVARDovetail_10454:HG3_Ill_MetaSV_1534:HG2_PB_pbsv_14730:HG2_PB_SVrefine2PBcRplusDovetail_3200:HG2_PB_SVrefine2PB10Xhap12_10643:HG2_PB_SVrefine2Falcon2Bionano_7346:HG2_PB_SVrefine2Falcon1plusDovetail_3407:HG2_Ill_SVrefine2DISCOVARplusDovetail_3685:HG2_Ill_GATKHCSBGrefine_9772:HG2_10X_SVrefine210Xhap12_10162:HG2_Ill_breakscan11_2105:HG3_PB_pbsv_14375;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10162:HG2_Ill_GATKHCSBGrefine_9772:HG2_Ill_SVrefine2DISCOVARplusDovetail_3685:HG2_PB_SVrefine2Falcon1plusDovetail_3407:HG2_PB_SVrefine2Falcon2Bionano_7346:HG2_PB_SVrefine2PB10Xhap12_10643:HG2_PB_SVrefine2PBcRplusDovetail_3200:HG2_PB_pbsv_14730:HG3_Ill_MetaSV_1534:HG3_Ill_SVrefine2DISCOVARDovetail_10454:HG3_PB_SVrefine2Falcon1Dovetail_8918:HG4_Ill_GATKHCSBGrefine_10076:HG4_Ill_MetaSV_1504:HG4_Ill_SVrefine2DISCOVARDovetail_10338:HG4_PB_SVrefine2Falcon1Dovetail_8950:HG4_PB_pbsv_14670;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00562162;ClusterMaxSizeDiff=0.00562162;ClusterMaxEditDist=0.00562162;PBcalls=11;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2317;DistBack=4518;DistForward=7270;DistMin=4518;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=14:28869844-28872163;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1089.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:112:1/1:6:25:0:21:1/1:1:23:0:40:1/1:0:43:1/1:2:148:2398:.:.
chr14	29728038	HG2_10X_SVrefine210Xhap12_10165	TGAGAATTCTTTTTTTTTTTTTTTGTTTTGCAACTAATATTGATTTCTTTTTTATTTTTATTTTTATTTTTATTTTTTTTTTAATTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGACATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2106:HG4_10X_allpass_2709:HG4_PB_assemblyticsfalcon_7686:HG3_PB_assemblyticsfalcon_7789:HG2_PB_assemblyticsfalcon_7772:HG2_PB_assemblyticsPBcR_7492:HG4_Ill_Krunchall_20162:HG3_Ill_Krunchall_19425:HG2_Ill_Krunchall_19847:HG3_PB_pbsv_14377:HG2_Ill_tnscope_1608:HG4_PB_pbsv_14672:HG4_PB_SVrefine2PBcRDovetail_7311:HG4_PB_SVrefine2Falcon1Dovetail_8951:HG4_Ill_manta_3440:HG4_Ill_SVrefine2DISCOVARDovetail_10341:HG4_Ill_MetaSV_1505:HG4_Ill_GATKHCSBGrefine_10078:HG3_PB_SVrefine2Falcon1Dovetail_8919:HG3_Ill_manta_3293:HG3_Ill_MetaSV_1535:HG3_Ill_GATKHCSBGrefine_9654:HG3_10X_allpass_2826:HG2_PB_pbsv_14733:HG2_PB_SVrefine2PBcRplusDovetail_3201:HG2_PB_SVrefine2PB10Xhap12_10644:HG2_PB_SVrefine2Falcon2Bionano_7347:HG2_PB_SVrefine2Falcon1plusDovetail_3409:HG2_Ill_manta_4039:HG2_Ill_SVrefine2DISCOVARplusDovetail_3691:HG2_Ill_MetaSV_1422:HG2_Ill_GATKHCSBGrefine_9774:HG2_10X_allpass_2315:HG2_10X_SVrefine210Xhap12_10165;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10165:HG2_10X_allpass_2315:HG2_Ill_GATKHCSBGrefine_9774:HG2_Ill_MetaSV_1422:HG2_Ill_SVrefine2DISCOVARplusDovetail_3691:HG2_Ill_manta_4039:HG2_PB_SVrefine2Falcon1plusDovetail_3409:HG2_PB_SVrefine2Falcon2Bionano_7347:HG2_PB_SVrefine2PB10Xhap12_10644:HG2_PB_SVrefine2PBcRplusDovetail_3201:HG2_PB_pbsv_14733:HG3_10X_allpass_2826:HG3_Ill_GATKHCSBGrefine_9654:HG3_Ill_MetaSV_1535:HG3_Ill_manta_3293:HG3_PB_SVrefine2Falcon1Dovetail_8919:HG4_Ill_GATKHCSBGrefine_10078:HG4_Ill_MetaSV_1505:HG4_Ill_SVrefine2DISCOVARDovetail_10341:HG4_Ill_manta_3440:HG4_PB_SVrefine2Falcon1Dovetail_8951:HG4_PB_SVrefine2PBcRDovetail_7311:HG4_PB_pbsv_14672;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0276316;ClusterMaxSizeDiff=0.0276316;ClusterMaxEditDist=0.0276316;PBcalls=14;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-764;DistBack=4897;DistForward=-754;DistMin=-754;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=14:29728039-29728813;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1090.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:68:1/1:6:19:3:36:1/1:0:30:0:31:1/1:0:41:./.:4:34:.:.:.
chr14	30558604	HG3_PB_SVrefine2Falcon1Dovetail_8922	TCTGTCACAAACAAGTCTTAAAACATTAAAAAAAACTTGAAATAATTTCAAGTATCTTCTCTGACCACAATGGAATAAAACTACAAATCAATAACAAGA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_14381:HG2_PB_HySA_26781:HG4_PB_pbsv_14676:HG2_PB_pbsv_14738:HG4_PB_SVrefine2PBcRDovetail_7313:HG4_PB_SVrefine2Falcon1Dovetail_8955:HG4_PB_HySA_21389:HG4_Ill_svaba_18263:HG4_Ill_SVrefine2DISCOVARDovetail_10347:HG4_Ill_GATKHCSBGrefine_10083:HG4_Ill_250bpfermikitraw_19255:HG4_Ill_150bpfermikitraw_18543:HG3_PB_SVrefine2PBcRDovetail_6954:HG3_PB_SVrefine2Falcon1Dovetail_8922:HG3_Ill_svaba_18369:HG3_Ill_SVrefine2DISCOVARDovetail_10462:HG3_Ill_GATKHCSBGrefine_9657:HG3_Ill_250bpfermikitraw_18935:HG3_Ill_150bpfermikitraw_18399:HG2_PB_SVrefine2PBcRplusDovetail_3204:HG2_PB_SVrefine2PB10Xhap12_10649:HG2_PB_SVrefine2Falcon2Bionano_7350:HG2_PB_SVrefine2Falcon1plusDovetail_3413:HG2_Ill_svaba_18230:HG2_Ill_manta_4040:HG2_Ill_SpiralSDKrefine_4836:HG2_Ill_SVrefine2DISCOVARplusDovetail_3694:HG2_Ill_GATKHCSBGrefine_9779:HG2_Ill_250bpfermikitraw_19519:HG2_Ill_150bpfermikitraw_18393:HG2_10X_SVrefine210Xhap12_10168;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10168:HG2_Ill_150bpfermikitraw_18393:HG2_Ill_250bpfermikitraw_19519:HG2_Ill_GATKHCSBGrefine_9779:HG2_Ill_SVrefine2DISCOVARplusDovetail_3694:HG2_Ill_SpiralSDKrefine_4836:HG2_Ill_manta_4040:HG2_Ill_svaba_18230:HG2_PB_SVrefine2Falcon1plusDovetail_3413:HG2_PB_SVrefine2Falcon2Bionano_7350:HG2_PB_SVrefine2PB10Xhap12_10649:HG2_PB_SVrefine2PBcRplusDovetail_3204:HG3_Ill_150bpfermikitraw_18399:HG3_Ill_250bpfermikitraw_18935:HG3_Ill_GATKHCSBGrefine_9657:HG3_Ill_SVrefine2DISCOVARDovetail_10462:HG3_Ill_svaba_18369:HG3_PB_SVrefine2Falcon1Dovetail_8922:HG3_PB_SVrefine2PBcRDovetail_6954:HG4_Ill_150bpfermikitraw_18543:HG4_Ill_250bpfermikitraw_19255:HG4_Ill_GATKHCSBGrefine_10083:HG4_Ill_SVrefine2DISCOVARDovetail_10347:HG4_Ill_svaba_18263:HG4_PB_HySA_21389:HG4_PB_SVrefine2Falcon1Dovetail_8955:HG4_PB_SVrefine2PBcRDovetail_7313;NumExactMatchSVs=27;ClusterMaxShiftDist=0.020202;ClusterMaxSizeDiff=0.020202;ClusterMaxEditDist=0.0204082;PBcalls=13;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-98;DistBack=75435;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=98;REFWIDENED=14:30558605-30558800;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1091.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:60:1/1:1:29:3:30:1/1:0:6:0:7:1/1:0:49:./.:.:.:.:.:.
chr14	30986508	HG2_PB_PB10Xdip_9608	CCTCTGATTTTGTTGTAGCAGCTAAAACAGACTAAGACATTAGCTGATGACATTAATAATAATAGAGTTTCCTTGAGAATCTAATTTGTCTTGGAGCCCCCAAAACAATAAAAATGCTTCACATAACTGGCATAGAATAGAAAACAGGGGAAATAAAATCCTACCTTTTCTCTATTATTTCAAGAAATTATTGGACACATCAAAGCCCATTATAAACCATGTATGGTCCATTGATGCCACCATTAGAACTTCTG	GTGCCAA	20	PASS	ClusterIDs=HG4_PB_HySA_21392:HG3_PB_HySA_22133:HG2_PB_HySA_26783:HG2_Ill_SpiralSDKrefine_4837:HG4_Ill_Spiral_1131:HG3_Ill_Spiral_15162:HG2_Ill_Spiral_970:HG4_PB_assemblyticsfalcon_7695:HG4_PB_SVrefine2PBcRDovetail_7315:HG4_PB_SVrefine2Falcon1Dovetail_8957:HG4_Ill_manta_3441:HG4_Ill_SVrefine2DISCOVARDovetail_10348:HG3_PB_assemblyticsfalcon_7801:HG3_PB_SVrefine2Falcon1Dovetail_8924:HG3_Ill_SVrefine2DISCOVARDovetail_10464:HG2_PB_assemblyticsfalcon_7779:HG2_PB_assemblyticsPBcR_7502:HG2_PB_SVrefine2PBcRplusDovetail_3205:HG2_PB_SVrefine2PB10Xhap12_10650:HG2_PB_SVrefine2Falcon2Bionano_7351:HG2_PB_SVrefine2Falcon1plusDovetail_3414:HG2_PB_PB10Xdip_9609:HG2_PB_PB10Xdip_9608:HG2_Ill_manta_4041:HG2_Ill_SVrefine2DISCOVARplusDovetail_3696:HG2_10X_SVrefine210Xhap12_10170:HG2_Ill_tnscope_1609:HG4_Ill_MetaSV_1508:HG2_Ill_MetaSV_1423:HG4_PB_pbsv_14678:HG3_PB_pbsv_14382:HG4_10X_allpass_2710:HG3_10X_allpass_2827:HG2_10X_allpass_2316:HG4_Ill_Krunchall_20174:HG3_Ill_Krunchall_19436:HG2_Ill_Krunchall_19860:HG4_Ill_scalpel_13484:HG2_Ill_scalpel_13815:HG2_PB_pbsv_14739;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10170:HG2_Ill_SVrefine2DISCOVARplusDovetail_3696:HG2_Ill_manta_4041:HG2_PB_PB10Xdip_9608:HG2_PB_PB10Xdip_9609:HG2_PB_SVrefine2Falcon1plusDovetail_3414:HG2_PB_SVrefine2Falcon2Bionano_7351:HG2_PB_SVrefine2PB10Xhap12_10650:HG2_PB_SVrefine2PBcRplusDovetail_3205:HG2_PB_assemblyticsPBcR_7502:HG2_PB_assemblyticsfalcon_7779:HG3_Ill_SVrefine2DISCOVARDovetail_10464:HG3_PB_SVrefine2Falcon1Dovetail_8924:HG3_PB_assemblyticsfalcon_7801:HG4_Ill_SVrefine2DISCOVARDovetail_10348:HG4_Ill_manta_3441:HG4_PB_SVrefine2Falcon1Dovetail_8957:HG4_PB_SVrefine2PBcRDovetail_7315:HG4_PB_assemblyticsfalcon_7695;NumExactMatchSVs=19;ClusterMaxShiftDist=0.097561;ClusterMaxSizeDiff=0.097561;ClusterMaxEditDist=0.097561;PBcalls=19;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=13;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=8;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-247;DistBack=-254;DistForward=-243;DistMin=-254;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=14:30986508-30986761;PctSeqSimilarity=0.9541;PctSizeSimilarity=0.9802;PctRecOverlap=0.9921;SizeDiff=-5;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=97;MatchId=1092.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:1/1:2:16:0:31:1/1:0:24:0:40:1/1:0:34:./.:.:.:.:.:.
chr14	31262984	HG2_Ill_SVrefine2DISCOVARplusDovetail_3697	TACAAAATGTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGCGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10171:HG4_PB_assemblyticsfalcon_7697:HG2_PB_assemblyticsPBcR_7503:HG2_PB_assemblyticsfalcon_7780:HG4_Ill_Krunchall_20175:HG3_Ill_Krunchall_19437:HG2_Ill_Krunchall_19861:HG2_PB_pbsv_14740:HG2_PB_HySA_26784:HG4_Ill_MetaSV_1509:HG3_Ill_MetaSV_1537:HG2_Ill_MetaSV_1424:HG4_PB_pbsv_14679:HG4_PB_SVrefine2PBcRDovetail_7317:HG4_PB_SVrefine2Falcon1Dovetail_8959:HG4_Ill_svaba_18265:HG4_Ill_scalpel_13485:HG4_Ill_manta_3442:HG4_Ill_SVrefine2DISCOVARDovetail_10351:HG4_Ill_GATKHCSBGrefine_10086:HG4_10X_allpass_2711:HG3_PB_pbsv_14383:HG3_PB_assemblyticsfalcon_7802:HG3_PB_SVrefine2PBcRDovetail_6956:HG3_PB_SVrefine2Falcon1Dovetail_8925:HG3_Ill_svaba_18371:HG3_Ill_scalpel_14041:HG3_Ill_manta_3294:HG3_Ill_SVrefine2DISCOVARDovetail_10465:HG3_Ill_GATKHCSBGrefine_9660:HG3_10X_allpass_2829:HG2_PB_SVrefine2PBcRplusDovetail_3206:HG2_PB_SVrefine2PB10Xhap12_10652:HG2_PB_SVrefine2Falcon2Bionano_7352:HG2_PB_SVrefine2Falcon1plusDovetail_3415:HG2_Ill_svaba_18231:HG2_Ill_scalpel_13816:HG2_Ill_manta_4042:HG2_Ill_breakscan11_2107:HG2_Ill_SpiralSDKrefine_4838:HG2_Ill_SVrefine2DISCOVARplusDovetail_3697:HG2_Ill_GATKHCSBGrefine_9782:HG2_10X_allpass_2317;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10171:HG4_PB_pbsv_14679:HG4_PB_SVrefine2PBcRDovetail_7317:HG4_PB_SVrefine2Falcon1Dovetail_8959:HG4_Ill_svaba_18265:HG4_Ill_scalpel_13485:HG4_Ill_manta_3442:HG4_Ill_SVrefine2DISCOVARDovetail_10351:HG4_Ill_GATKHCSBGrefine_10086:HG4_10X_allpass_2711:HG3_PB_pbsv_14383:HG3_PB_assemblyticsfalcon_7802:HG3_PB_SVrefine2PBcRDovetail_6956:HG3_PB_SVrefine2Falcon1Dovetail_8925:HG3_Ill_svaba_18371:HG3_Ill_scalpel_14041:HG3_Ill_manta_3294:HG3_Ill_SVrefine2DISCOVARDovetail_10465:HG3_Ill_GATKHCSBGrefine_9660:HG3_10X_allpass_2829:HG2_PB_SVrefine2PBcRplusDovetail_3206:HG2_PB_SVrefine2PB10Xhap12_10652:HG2_PB_SVrefine2Falcon2Bionano_7352:HG2_PB_SVrefine2Falcon1plusDovetail_3415:HG2_Ill_svaba_18231:HG2_Ill_scalpel_13816:HG2_Ill_manta_4042:HG2_Ill_breakscan11_2107:HG2_Ill_SpiralSDKrefine_4838:HG2_Ill_SVrefine2DISCOVARplusDovetail_3697:HG2_Ill_GATKHCSBGrefine_9782:HG2_10X_allpass_2317;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0958269;ClusterMaxSizeDiff=0.0958269;ClusterMaxEditDist=0.0958269;PBcalls=16;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=80421;DistForward=-315;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=14:31262985-31263330;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1093.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:49:1/1:0:22:1:26:1/1:0:18:0:28:1/1:0:31:./.:2:14:.:.:.
chr14	31813876	HG2_Ill_250bpfermikitraw_19525	AATTTTCATAAAAAGTGGAATTAGAAATTGCCAATAAACTTAGCCTCACTTGTATTAGTTAAGAATTACTTTCATGTATTATAATCATGTAATAGTATGCAATTTGAACAGCTCGTAATATTTGAAATTTTGGACTTAGCCATTTATTTCTTAAATAGAGAACACAGCTCTTTGG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_971:HG4_PB_assemblyticsfalcon_7702:HG3_PB_assemblyticsfalcon_7806:HG2_PB_assemblyticsPBcR_7506:HG2_PB_HySA_26790:HG2_PB_assemblyticsfalcon_7786:HG4_PB_pbsv_14681:HG4_PB_SVrefine2PBcRDovetail_7319:HG4_PB_SVrefine2Falcon1Dovetail_8961:HG4_Ill_svaba_18273:HG4_Ill_manta_3445:HG4_Ill_SVrefine2DISCOVARDovetail_10355:HG4_Ill_GATKHCSBGrefine_10088:HG4_Ill_Cortex_1040:HG4_Ill_250bpfermikitraw_19263:HG4_Ill_150bpfermikitraw_18552:HG4_CG_vcfBeta_9253:HG4_10X_allpass_2712:HG3_PB_pbsv_14386:HG3_PB_SVrefine2PBcRDovetail_6958:HG3_PB_SVrefine2Falcon1Dovetail_8928:HG3_PB_HySA_22135:HG3_Ill_svaba_18374:HG3_Ill_scalpel_14043:HG3_Ill_manta_3295:HG3_Ill_GATKHCSBGrefine_9662:HG3_Ill_Cortex_1086:HG3_Ill_250bpfermikitraw_18941:HG3_Ill_150bpfermikitraw_18405:HG3_CG_vcfBeta_7826:HG3_10X_allpass_2830:HG2_PB_pbsv_14742:HG2_PB_SVrefine2PBcRplusDovetail_3208:HG2_PB_SVrefine2PB10Xhap12_10654:HG2_PB_SVrefine2Falcon2Bionano_7354:HG2_PB_SVrefine2Falcon1plusDovetail_3417:HG2_Ill_svaba_18235:HG2_Ill_scalpel_13818:HG2_Ill_manta_4043:HG2_Ill_SpiralSDKrefine_4841:HG2_Ill_SVrefine2DISCOVARplusDovetail_3700:HG2_Ill_MetaSV_1426:HG2_Ill_GATKHCSBGrefine_9784:HG2_Ill_Cortex_2519:HG2_Ill_250bpfermikitraw_19525:HG2_Ill_150bpfermikitraw_18397:HG2_CG_vcfBeta_8225:HG2_10X_allpass_2318:HG2_10X_SVrefine210Xhap12_10175:HG2_Ill_breakscan11_2108:HG4_PB_HySA_21396:HG4_Ill_MetaSV_1511:HG3_Ill_MetaSV_1538;NumClusterSVs=53;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10175:HG2_10X_allpass_2318:HG2_CG_vcfBeta_8225:HG2_Ill_150bpfermikitraw_18397:HG2_Ill_250bpfermikitraw_19525:HG2_Ill_Cortex_2519:HG2_Ill_GATKHCSBGrefine_9784:HG2_Ill_MetaSV_1426:HG2_Ill_SVrefine2DISCOVARplusDovetail_3700:HG2_Ill_SpiralSDKrefine_4841:HG2_Ill_manta_4043:HG2_Ill_scalpel_13818:HG2_Ill_svaba_18235:HG2_PB_SVrefine2Falcon1plusDovetail_3417:HG2_PB_SVrefine2Falcon2Bionano_7354:HG2_PB_SVrefine2PB10Xhap12_10654:HG2_PB_SVrefine2PBcRplusDovetail_3208:HG2_PB_pbsv_14742:HG3_10X_allpass_2830:HG3_CG_vcfBeta_7826:HG3_Ill_150bpfermikitraw_18405:HG3_Ill_250bpfermikitraw_18941:HG3_Ill_Cortex_1086:HG3_Ill_GATKHCSBGrefine_9662:HG3_Ill_manta_3295:HG3_Ill_scalpel_14043:HG3_Ill_svaba_18374:HG3_PB_HySA_22135:HG3_PB_SVrefine2Falcon1Dovetail_8928:HG3_PB_SVrefine2PBcRDovetail_6958:HG3_PB_pbsv_14386:HG4_10X_allpass_2712:HG4_CG_vcfBeta_9253:HG4_Ill_150bpfermikitraw_18552:HG4_Ill_250bpfermikitraw_19263:HG4_Ill_Cortex_1040:HG4_Ill_GATKHCSBGrefine_10088:HG4_Ill_SVrefine2DISCOVARDovetail_10355:HG4_Ill_manta_3445:HG4_Ill_svaba_18273:HG4_PB_SVrefine2Falcon1Dovetail_8961:HG4_PB_SVrefine2PBcRDovetail_7319:HG4_PB_pbsv_14681;NumExactMatchSVs=43;ClusterMaxShiftDist=0.017192;ClusterMaxSizeDiff=0.017192;ClusterMaxEditDist=0.017192;PBcalls=18;Illcalls=28;TenXcalls=4;CGcalls=3;PBexactcalls=12;Illexactcalls=24;TenXexactcalls=4;CGexactcalls=3;HG2count=23;HG3count=15;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-174;DistBack=-16;DistForward=24763;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=14:31813877-31814052;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1094.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:./.:0:6:0:1:1/1:0:12:0:13:1/1:0:28:./.:.:.:.:.:.
chr14	31942995	HG2_Ill_scalpel_13820	AGCAAATCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG4_PB_HySA_21400:HG4_10X_allpass_2713:HG3_PB_HySA_22138:HG2_PB_assemblyticsfalcon_7790:HG4_Ill_Krunchall_20187:HG3_Ill_Krunchall_19446:HG4_PB_assemblyticsfalcon_7705:HG3_PB_assemblyticsfalcon_7809:HG2_PB_assemblyticsPBcR_7509:HG3_Ill_Spiral_15166:HG4_PB_pbsv_14682:HG3_PB_pbsv_14388:HG4_Ill_MetaSV_1512:HG3_Ill_MetaSV_1539:HG2_Ill_tnscope_1610:HG2_Ill_MetaSV_1427:HG4_PB_SVrefine2PBcRDovetail_7321:HG4_PB_SVrefine2Falcon1Dovetail_8963:HG4_Ill_svaba_18275:HG4_Ill_scalpel_13492:HG4_Ill_manta_3446:HG4_Ill_SVrefine2DISCOVARDovetail_10357:HG4_Ill_GATKHCSBGrefine_10089:HG3_PB_SVrefine2PBcRDovetail_6960:HG3_PB_SVrefine2Falcon1Dovetail_8930:HG3_Ill_svaba_18376:HG3_Ill_scalpel_14045:HG3_Ill_manta_3296:HG3_Ill_SVrefine2DISCOVARDovetail_10469:HG3_Ill_GATKHCSBGrefine_9663:HG2_PB_pbsv_14744:HG2_PB_SVrefine2PBcRplusDovetail_3210:HG2_PB_SVrefine2PB10Xhap12_10655:HG2_PB_SVrefine2Falcon2Bionano_7356:HG2_PB_SVrefine2Falcon1plusDovetail_3419:HG2_PB_HySA_26794:HG2_Ill_svaba_18237:HG2_Ill_scalpel_13820:HG2_Ill_manta_4044:HG2_Ill_breakscan11_2110:HG2_Ill_SVrefine2DISCOVARplusDovetail_3702:HG2_Ill_GATKHCSBGrefine_9785:HG2_10X_allpass_2319:HG2_10X_SVrefine210Xhap12_10177;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10177:HG2_10X_allpass_2319:HG2_Ill_GATKHCSBGrefine_9785:HG2_Ill_SVrefine2DISCOVARplusDovetail_3702:HG2_Ill_breakscan11_2110:HG2_Ill_manta_4044:HG2_Ill_scalpel_13820:HG2_Ill_svaba_18237:HG2_PB_HySA_26794:HG2_PB_SVrefine2Falcon1plusDovetail_3419:HG2_PB_SVrefine2Falcon2Bionano_7356:HG2_PB_SVrefine2PB10Xhap12_10655:HG2_PB_SVrefine2PBcRplusDovetail_3210:HG2_PB_pbsv_14744:HG3_Ill_GATKHCSBGrefine_9663:HG3_Ill_SVrefine2DISCOVARDovetail_10469:HG3_Ill_manta_3296:HG3_Ill_scalpel_14045:HG3_Ill_svaba_18376:HG3_PB_SVrefine2Falcon1Dovetail_8930:HG3_PB_SVrefine2PBcRDovetail_6960:HG4_Ill_GATKHCSBGrefine_10089:HG4_Ill_SVrefine2DISCOVARDovetail_10357:HG4_Ill_manta_3446:HG4_Ill_scalpel_13492:HG4_Ill_svaba_18275:HG4_PB_SVrefine2Falcon1Dovetail_8963:HG4_PB_SVrefine2PBcRDovetail_7321;NumExactMatchSVs=28;ClusterMaxShiftDist=0.084507;ClusterMaxSizeDiff=0.084507;ClusterMaxEditDist=0.0846395;PBcalls=18;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=16508;DistForward=37168;DistMin=16508;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=14:31942996-31943334;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1095.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:1:21:0:15:1/1:0:15:0:17:1/1:0:43:./.:2:18:.:.:.
chr14	33391973	HG2_PB_SVrefine2Falcon2Bionano_7359	ATGTAATACTACCAATAATAACTTTTCCATGGAAGTACGTTTGCATGTCAGAGACTGTGCTAAACACTTCATATTGCTTACCTTGTTTCATCTTTATAATAACCCTGTGAGGTATCTTTTCTGACTTTTACACATACTTGTTCATTGGTATCTCCTCTTACCTCTAGTGAAAGCTTTGATGACGAACAGGGGCTTCGTTTTATACCCTACTGTAGCCCTGCTGCTTAAAAGAATACTTGGCGGCCAGGTGCGGTGGCTCAAGCCTGTAATCCCAACACTTTGGGAGGCGGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACGACCATCCTGGC	CGT	20	PASS	ClusterIDs=HG2_PB_pbsv_14749:HG4_Ill_GATKHCSBGrefine_10096:HG3_Ill_GATKHCSBGrefine_9668:HG2_Ill_GATKHCSBGrefine_9790:HG2_Ill_SpiralSDKrefine_4851:HG2_Ill_tnscope_1611:HG4_Ill_Spiral_1132:HG3_Ill_Spiral_15178:HG2_Ill_Spiral_972:HG4_PB_assemblyticsfalcon_7716:HG4_PB_SVrefine2Falcon1Dovetail_8968:HG4_Ill_manta_3447:HG4_Ill_SVrefine2DISCOVARDovetail_10365:HG3_PB_assemblyticsfalcon_7821:HG3_PB_SVrefine2PBcRDovetail_6964:HG3_PB_SVrefine2Falcon1Dovetail_8935:HG3_Ill_manta_3299:HG3_Ill_SVrefine2DISCOVARDovetail_10474:HG2_PB_SVrefine2Falcon2Bionano_7359:HG2_Ill_manta_4046:HG2_10X_SVrefine210Xhap12_10183:HG3_PB_HySA_22149:HG3_PB_pbsv_14393:HG4_10X_allpass_2715:HG3_10X_allpass_2831:HG2_Ill_MetaSV_1430:HG2_10X_allpass_2320:HG4_Ill_MetaSV_1517:HG3_Ill_MetaSV_1542:HG4_PB_pbsv_14688:HG4_PB_SVrefine2PBcRDovetail_7324;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10183:HG2_Ill_manta_4046:HG2_PB_SVrefine2Falcon2Bionano_7359:HG3_Ill_SVrefine2DISCOVARDovetail_10474:HG3_Ill_manta_3299:HG3_PB_SVrefine2Falcon1Dovetail_8935:HG3_PB_SVrefine2PBcRDovetail_6964:HG3_PB_assemblyticsfalcon_7821:HG4_Ill_SVrefine2DISCOVARDovetail_10365:HG4_Ill_manta_3447:HG4_PB_SVrefine2Falcon1Dovetail_8968:HG4_PB_assemblyticsfalcon_7716;NumExactMatchSVs=12;ClusterMaxShiftDist=0.129134;ClusterMaxSizeDiff=0.129134;ClusterMaxEditDist=0.129134;PBcalls=11;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=-195;DistForward=-274;DistMin=-274;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=14:33391973-33392308;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.997;PctRecOverlap=0.9911;SizeDiff=1;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1096.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:22:0|1:24:3:3:23:0|1:86:0:0:22:0/1:38:10:0/1:26:6:.:.:.
chr14	34290035	HG4_PB_SVrefine2Falcon1Dovetail_8969	TGAAAATTACAGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_15187:HG4_Ill_Krunchall_20207:HG3_Ill_Krunchall_19465:HG2_Ill_Krunchall_19892:HG4_PB_assemblyticsfalcon_7723:HG3_PB_assemblyticsfalcon_7825:HG2_PB_pbsv_14751:HG2_PB_assemblyticsfalcon_7806:HG2_PB_assemblyticsPBcR_7527:HG3_PB_HySA_22159:HG2_PB_HySA_26813:HG4_Ill_MetaSV_1518:HG3_Ill_MetaSV_1544:HG2_Ill_tnscope_1612:HG2_Ill_MetaSV_1432:HG4_PB_pbsv_14691:HG4_PB_SVrefine2PBcRDovetail_7325:HG4_PB_SVrefine2Falcon1Dovetail_8969:HG4_Ill_svaba_18291:HG4_Ill_manta_3448:HG4_Ill_SVrefine2DISCOVARDovetail_10367:HG4_Ill_GATKHCSBGrefine_10098:HG4_10X_allpass_2716:HG3_PB_pbsv_14395:HG3_PB_SVrefine2PBcRDovetail_6966:HG3_PB_SVrefine2Falcon1Dovetail_8936:HG3_Ill_svaba_18393:HG3_Ill_manta_3300:HG3_Ill_SVrefine2DISCOVARDovetail_10479:HG3_Ill_GATKHCSBGrefine_9669:HG3_10X_allpass_2832:HG2_PB_SVrefine2PBcRplusDovetail_3214:HG2_PB_SVrefine2PB10Xhap12_10659:HG2_PB_SVrefine2Falcon2Bionano_7362:HG2_PB_SVrefine2Falcon1plusDovetail_3423:HG2_Ill_svaba_18254:HG2_Ill_manta_4047:HG2_Ill_breakscan11_2111:HG2_Ill_SVrefine2DISCOVARplusDovetail_3714:HG2_Ill_GATKHCSBGrefine_9792:HG2_10X_allpass_2321:HG2_10X_SVrefine210Xhap12_10188:HG4_Ill_Spiral_1133;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10188:HG2_10X_allpass_2321:HG2_Ill_GATKHCSBGrefine_9792:HG2_Ill_SVrefine2DISCOVARplusDovetail_3714:HG2_Ill_breakscan11_2111:HG2_Ill_manta_4047:HG2_Ill_svaba_18254:HG2_PB_SVrefine2Falcon1plusDovetail_3423:HG2_PB_SVrefine2Falcon2Bionano_7362:HG2_PB_SVrefine2PB10Xhap12_10659:HG2_PB_SVrefine2PBcRplusDovetail_3214:HG3_10X_allpass_2832:HG3_Ill_GATKHCSBGrefine_9669:HG3_Ill_SVrefine2DISCOVARDovetail_10479:HG3_Ill_manta_3300:HG3_Ill_svaba_18393:HG3_PB_SVrefine2Falcon1Dovetail_8936:HG3_PB_SVrefine2PBcRDovetail_6966:HG3_PB_pbsv_14395:HG4_10X_allpass_2716:HG4_Ill_GATKHCSBGrefine_10098:HG4_Ill_SVrefine2DISCOVARDovetail_10367:HG4_Ill_manta_3448:HG4_Ill_svaba_18291:HG4_PB_SVrefine2Falcon1Dovetail_8969:HG4_PB_SVrefine2PBcRDovetail_7325:HG4_PB_pbsv_14691;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0748503;ClusterMaxSizeDiff=0.0748503;ClusterMaxEditDist=0.0748503;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-339;DistBack=44307;DistForward=11146;DistMin=11146;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=14:34290036-34290387;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1097.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:29:1/1:1:17:0:9:1/1:0:25:0:18:1/1:0:36:0/1:2:14:.:.:.
chr14	34514027	HG2_PB_SVrefine2Falcon1plusDovetail_3425	CCACCGAAATATTGGTTTCATCCACATCATAAAACAGTGCTATAACCATATCTGGAGCAAGGGAGGAAGGGGAGAGTGACAGAAAGGGGGATGCAAACACAAGAAAACTAACTCCTCATCTGCCTCAGCAGAAAGTTAGTGCATAATATCCAAACCTGCAAAATCAAGAAATAGCAGCATAAGCATGTTGTTTAGAAGGTTTTCGGATTTGGAAGCAGTTGCCTCAGGGGTACAGAATCAGGTATGAAGCAGGGTAGCCACGGCAAATGTTTCTTGATGTAACATTTGTAGTGCTGTTTTGACTTTTTCTTTTTCTTTCTTTCAAGAGAACGTTTCTCTCTGTCGCTCAGGCTGGAGTGCAGTAGTGCAATCATGACCCACTTCAGCCTCCGCCTCCCAGGCCTTTAAGTGATTCTCCTGCCTCAGCCTCCCAAGTGGCTGGGACTATGGTGTGTACCACCATACTTAGCTAATATTTTGATTTTTTATAAAGACTGTGTCTCACTACATTGCCTGGGTTGGTTGCAAACTCCTGGGCTCAAGCAATCCTCTTGCCTCAGCCTCCCAAAGTGCTGTGATTGCAGGTGTGAGTTACTGCACTGGACTGTTTTGACTTTTTAAACTATGTACATATATTGTTATAACTGTTAAGGGTATAGTTGAGAAGATAGGTTTTTTTTTTCTCTTTGAACCAATGCAAAAAAAAAAAAAGAAGAAAAGAAAGCATGTTACCAAAATTATAAGTTGTATGAAACCACATTTTTACCTATTACATACATAGAAAAATATCTAAAATAACATATACCAAGG	GA	20	PASS	ClusterIDs=HG3_PB_pbsv_14399:HG3_Ill_GATKHCSBGrefine_9670:HG2_Ill_GATKHCSBGrefine_9794:HG2_PB_pbsv_14756:HG2_10X_allpass_2322:HG3_10X_allpass_2833:HG2_Ill_tnscope_1613:HG2_Ill_SpiralSDKrefine_4861:HG4_PB_assemblyticsfalcon_7728:HG4_PB_SVrefine2Falcon1Dovetail_8972:HG3_PB_assemblyticsfalcon_7826:HG3_PB_SVrefine2Falcon1Dovetail_8937:HG3_Ill_manta_3301:HG3_Ill_SVrefine2DISCOVARDovetail_10483:HG2_PB_SVrefine2PBcRplusDovetail_3218:HG2_PB_SVrefine2PB10Xhap12_10665:HG2_PB_SVrefine2Falcon2Bionano_7365:HG2_PB_SVrefine2Falcon1plusDovetail_3425:HG2_Ill_manta_4049:HG2_Ill_Spiral_973:HG2_PB_assemblyticsfalcon_7809:HG2_PB_assemblyticsPBcR_7531:HG2_Ill_MetaSV_1435:HG3_Ill_MetaSV_1546;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_manta_4049:HG2_PB_SVrefine2Falcon1plusDovetail_3425:HG2_PB_SVrefine2Falcon2Bionano_7365:HG2_PB_SVrefine2PB10Xhap12_10665:HG2_PB_SVrefine2PBcRplusDovetail_3218:HG3_Ill_SVrefine2DISCOVARDovetail_10483:HG3_Ill_manta_3301:HG3_PB_SVrefine2Falcon1Dovetail_8937:HG3_PB_assemblyticsfalcon_7826:HG4_PB_SVrefine2Falcon1Dovetail_8972:HG4_PB_assemblyticsfalcon_7728;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0111317;ClusterMaxSizeDiff=0.0111317;ClusterMaxEditDist=0.0111317;PBcalls=12;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-808;DistBack=-318;DistForward=-491;DistMin=-491;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=14:34514027-34514836;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9963;SizeDiff=0;StartDistance=2;EndDistance=3;GTMatch=0;TruScore=99;MatchId=1098.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:8:18:./.:2:10:5:3:0|1:50:0:0:13:0/1:65:14:0/1:79:15:.:.:.
chr14	35398857	HG3_Ill_Krunchall_19475	ACGCCAGGAGCAGTGGCTTAAGCCTATAATTCTAGCACTTTGGTAGGCAGAGATAGGAGGATTGCTTGAGTCCAGGAGTTTGAGATCAG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_18429:HG3_Ill_GATKHC_23250:HG3_Ill_GATKHCSBGrefine_9672:HG3_PB_HySA_22172:HG3_Ill_manta_3302:HG3_Ill_SVrefine2DISCOVARDovetail_10490:HG2_PB_PB10Xdip_9723:HG2_Ill_SVrefine2DISCOVARplusDovetail_3725:HG3_Ill_Spiral_15196:HG2_Ill_Spiral_975:HG3_PB_assemblyticsfalcon_7837:HG3_PB_pbsv_14405:HG2_PB_pbsv_14763:HG3_Ill_Krunchall_19475:HG3_Ill_250bpfermikitraw_18970:HG3_Ill_150bpfermikitraw_18440:HG2_Ill_Krunchall_19903:HG2_Ill_250bpfermikitraw_19558;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18429:HG3_Ill_Krunchall_19475:HG3_Ill_250bpfermikitraw_18970:HG3_Ill_150bpfermikitraw_18440:HG2_Ill_Krunchall_19903:HG2_Ill_250bpfermikitraw_19558;NumExactMatchSVs=6;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.144578;PBcalls=5;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-88;DistBack=26504;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=89;REFWIDENED=14:35398858-35399034;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1099.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:22:0|1:30:1:1:24:0|1:22:1:0:10:0/1:27:26:./.:.:.:.:.:.
chr14	35401402	HG2_10X_SVrefine210Xhap12_10194	TAAGAAATTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCACCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCCAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2112:HG3_PB_HySA_22173:HG2_10X_allpass_2323:HG3_10X_allpass_2834:HG4_Ill_Krunchall_20222:HG3_Ill_Krunchall_19476:HG2_Ill_Krunchall_19904:HG2_PB_assemblyticsPBcR_7541:HG4_PB_assemblyticsfalcon_7739:HG3_PB_pbsv_14406:HG2_PB_pbsv_14764:HG2_PB_SVrefine2PB10Xhap12_10670:HG3_Ill_MetaSV_1550:HG2_Ill_tnscope_1614:HG2_Ill_MetaSV_1438:HG4_PB_pbsv_14710:HG4_PB_SVrefine2Falcon1Dovetail_8978:HG4_Ill_manta_3452:HG4_Ill_MetaSV_1524:HG4_Ill_GATKHCSBGrefine_10105:HG4_10X_allpass_2718:HG3_PB_assemblyticsfalcon_7838:HG3_PB_SVrefine2Falcon1Dovetail_8942:HG3_Ill_scalpel_14074:HG3_Ill_manta_3303:HG3_Ill_SVrefine2DISCOVARDovetail_10491:HG3_Ill_GATKHCSBGrefine_9673:HG2_PB_SVrefine2Falcon1plusDovetail_3429:HG2_Ill_manta_4051:HG2_Ill_SVrefine2DISCOVARplusDovetail_3726:HG2_Ill_GATKHCSBGrefine_9797:HG2_10X_SVrefine210Xhap12_10194;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10194:HG2_Ill_GATKHCSBGrefine_9797:HG2_Ill_SVrefine2DISCOVARplusDovetail_3726:HG2_Ill_manta_4051:HG2_PB_SVrefine2Falcon1plusDovetail_3429:HG3_Ill_GATKHCSBGrefine_9673:HG3_Ill_SVrefine2DISCOVARDovetail_10491:HG3_Ill_manta_3303:HG3_Ill_scalpel_14074:HG3_PB_SVrefine2Falcon1Dovetail_8942:HG3_PB_assemblyticsfalcon_7838:HG4_10X_allpass_2718:HG4_Ill_GATKHCSBGrefine_10105:HG4_Ill_MetaSV_1524:HG4_Ill_manta_3452:HG4_PB_SVrefine2Falcon1Dovetail_8978:HG4_PB_pbsv_14710;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0722135;ClusterMaxSizeDiff=0.0722135;ClusterMaxEditDist=0.0753532;PBcalls=11;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=2366;DistForward=-317;DistMin=-317;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=14:35401403-35401734;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1100.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:23:0|1:30:0:0:26:0|1:43:0:0:33:0/1:30:27:0/1:24:20:.:.:.
chr14	35507700	HG3_Ill_SVrefine2DISCOVARDovetail_10492	CAAGACTTACGAATAGAGCGCCGCCCGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGCGGGGCCCGAGGGCAAGGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCGGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCACCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGTGCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCTAGCCGCCCCGTCCGGGAGGTGAGGGGCACCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCGGCCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATTAAAAAATAAATTTAAAAAAAAAATACAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10195:HG2_10X_allpass_2324:HG3_Ill_Krunchall_19481:HG2_Ill_Krunchall_19909:HG4_PB_assemblyticsfalcon_7743:HG2_PB_assemblyticsfalcon_7826:HG3_10X_allpass_2835:HG3_PB_assemblyticsfalcon_7843:HG2_PB_assemblyticsPBcR_7543:HG3_Ill_MetaSV_1551:HG2_Ill_tnscope_1615:HG4_PB_SVrefine2Falcon1Dovetail_8979:HG3_PB_pbsv_14408:HG3_PB_SVrefine2PBcRDovetail_6971:HG3_PB_SVrefine2Falcon1Dovetail_8943:HG3_Ill_SVrefine2DISCOVARDovetail_10492:HG3_Ill_GATKHCSBGrefine_9675:HG2_PB_pbsv_14766:HG2_PB_SVrefine2PBcRplusDovetail_3221:HG2_PB_SVrefine2PB10Xhap12_10672:HG2_PB_SVrefine2Falcon1plusDovetail_3430:HG2_Ill_MetaSV_1439:HG2_Ill_GATKHCSBGrefine_9799;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10195:HG4_PB_SVrefine2Falcon1Dovetail_8979:HG3_PB_pbsv_14408:HG3_PB_SVrefine2PBcRDovetail_6971:HG3_PB_SVrefine2Falcon1Dovetail_8943:HG3_Ill_SVrefine2DISCOVARDovetail_10492:HG3_Ill_GATKHCSBGrefine_9675:HG2_PB_pbsv_14766:HG2_PB_SVrefine2PBcRplusDovetail_3221:HG2_PB_SVrefine2PB10Xhap12_10672:HG2_PB_SVrefine2Falcon1plusDovetail_3430:HG2_Ill_MetaSV_1439:HG2_Ill_GATKHCSBGrefine_9799;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0161022;ClusterMaxSizeDiff=0.0161022;ClusterMaxEditDist=0.0161022;PBcalls=12;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-1807;DistBack=12299;DistForward=-1801;DistMin=-1801;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=14:35507701-35509522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1101.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:28:0|1:34:0:0:36:0|1:36:0:0:29:0/1:43:24:0/1:102:52:1604:.:.
chr14	36980762	HG3_Ill_SVrefine2DISCOVARDovetail_10504	AATAGATATATGTGTGTAAGATAGATACATATGTATATATACATGTGTATAAGAGATACATATGT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3437:HG2_Ill_250bpfermikitraw_19574:HG2_PB_pbsv_14773:HG3_PB_pbsv_14416:HG4_PB_pbsv_14721:HG4_PB_SVrefine2Falcon1Dovetail_8986:HG3_PB_SVrefine2Falcon1Dovetail_8950:HG3_Ill_SVrefine2DISCOVARDovetail_10504:HG2_PB_SVrefine2PB10Xhap12_10677;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3437:HG4_PB_SVrefine2Falcon1Dovetail_8986:HG3_PB_SVrefine2Falcon1Dovetail_8950:HG3_Ill_SVrefine2DISCOVARDovetail_10504:HG2_PB_SVrefine2PB10Xhap12_10677;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0458015;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.0909091;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-64;DistBack=13347;DistForward=-15;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=14:36980761-36980830;PctSeqSimilarity=0.9423;PctSizeSimilarity=0.9697;PctRecOverlap=0.2239;SizeDiff=-2;StartDistance=-50;EndDistance=-52;GTMatch=0;TruScore=71;MatchId=1103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:48:./.:4:24:7:15:0/0:23:0:32:1:./.:62:5:./.:.:.:.:.:.
chr14	38133149	HG2_10X_SVrefine210Xhap12_10208	AGGGAAGTGAAGGACCTCTTCAAGGAGAACTATAAACCACTGCTCAAAGAAATCAGAGATGACCCAAACAAATGGAGAAACATTTCTTGCTCATGGATAGGAAGAATCAATATTGTGAAAATGGCCATACTGCCCAAAGTAATTTATAGATTTAATGCTATTCCCATTAAACTACCATTGACATTCTTCACAGAATTAGAAAAAGCTATTTTAAAGCTCATGTGGAACAAAAAAAGAGCCCATGTAGCCAAGGCAATCCTAAGTGAAAAGAATAAGGCTGGAGGCATCACACTGCCCAATTTCAAACTATACTAAAGGCTACAGTAACCACAACAGCATGGTACTGGTACAAGAACAGACACATAGATGAATAGAACAGAATAGAGAGCTCAGAAATGAGACGTCGCACCTACAACCATCAGATCTTTGACAAAGCTGACAACAAGAAGCAATGGAGAAAAGAATCCCTATTTAATAAATGGCACCAGGAGAAGTGGTTATCCATATGTAGAAAATTGAAACTGGACCCTTTCCTCACACCATATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAAACCCCAAACTACAAAGACCCTAGAAGAAAATCTAGGCAGTATCATCAGGATAGAGGTATGGGCAAAGATTTCAAGATGAAAATGCCAAAAGCAATTGCAACAAAAGCAAACATTGACAAATGGGATCTAATTAAACTAAACAGCTATTCCACAGCAAAAGAAACTATAATCAGAGTGAACAGACAACCTACAAAATTGGGGAAAATTTTTGCAATCTATCCATCTGACAAAAGTCCAATATCCAGAGCTTATCAGGAACTTAAATCTACAAGAAAAAAACAAACAACCCCATTAAAAAGTGGGTAAAGGACATGAGCAGACATTTCTCAAAAGAAGACATACTTGTGGCCAGCAAACTTATGGAAAAGAGCTCAACCTTACTGATTATTAGAGAAATGAAAATCAGAACCACAATGAGATATCATCTCATGCCAGTTAGAATGGCTATTATTAAAAAGTCAAAAAACAACAGTTGCTGGAGAGGTTGTGGAGAAAAAGCAATACTTTTACACTGTTGGTGGGAGTATAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCAATTCCTCAAATAGCTTGAGGCAGAAATACCATTTGACCCAGCAATCCCATTACGGGGTATATACCCAAAAGAATATAAATCATTCTACCATAAAGATACATGCATGCAAATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCTAAATGCCCACCAATGATAGAATGAATAAAGGAAATGTGGTATATATATACCATGGAATACTATGCAGCCATAAAAAGAATGAGATCATCTCCTTTGCAGGGACATGGATGGAGTTGAAAGCCTTTATCCTCAGCAAACTAATGCAGGAACAGAAAACCAAACACCACATGTTGTCACTTATAAGTGGGAGCTGAATGATGAGAACACATGGACACATTGAGGGAGAACAACACACACTGGAGCCAGTCAGTGGGTATGGCAGGAGGGAGAGCACCAGGAAGAACAGCTAATGGATGCTGGGCTTAATACCTAGGTGATGAGATGATCTGTGCAACGAACCACCGTGGCACGTTTACCTGTATAACAAACCTGCACGTCCTGCACATGTACCCATGAACTTAAAATAAAAGTTGAAGGAAAAAAATGATGAACTGGCAAAATTAACCTTGAGCATCTTGAAGAAAAAGGGCTATGTGAGAAGAACACAAGCAAGTTAAGCAGGGCCAAGCTGAGCTTGTGATGAACTGTCTGCTTAATATTTAGGGACTGTACCTCTCCTTAAGACCAGAATCACACTCTTTGTGATGAGATACTCAGACTCCAAGGCTGCACCAGGAACTGAGAGTGACCTGAAAGCAGCTAAATCAAGCTTGTCCTCTCATGCACACACCAGAGCCTTGATTTAGCATTACTTCTTTCCCCTCTTCTACCTCCAAAATACAGAGTTTACCCTATGGGAGCTAAATGAATATAGGATCACTAAACAACTTAACACATGAAATGATTCTAAGTGTAAATTTGATTTTAGATCATCCATCTATATTATACTGCAACTTGCAAAAGCAGTGATTTCTAGTGTTTCAGAGAGTCCTTGGGTCCTGTGGAGGGGTGAGGGCAGGAATGAGTGGGTGGGCTGTGGTCCTTCCAGCACCCTCCATTGGCCTTCATGGCTGTGGTCCTTCCAGCACCCTCCATCAGCCTTCACCTGACTGCAACATTCCCCATCGATCTGCTTTATACACTGGGCCTCCAAGTATGAGTTTGTTTGACAGATAGGTCCTACCATTTAAAAAAGTTGAAAGTGGCCAGGCTCAGTGGCTTACACTGTAATCCCGGCACTCTGGGTGGCTGAAGTGCGAGGATCACCTGAGCCCAGAAATTTGAGACCAGCCTGAGCAACATAGTGAGGCCCTGTCTCAAAAAAAAAAAAAAAAGATGAAAGCCATGGATGTAAAGTATAGTTTCAATATTCTTAATTTTCCAGTGTCATAGCAGTTTCCTGGAGCGATGCAGGTAGAGTGCCTGGTTAGGCCACCGAGGAGATTTCTTGCTTCTCTCAGAGGGTGGCTCTTTTGTCAAACTGCCCATTAACTCCCTTAGGAGAGAAAGGGATGGGAAGTAAGGAAAGATACCCTCAAAACTTGTTTGCTCAATCTGTGAAATTTACCCCCTTTTTGTAATTTATTACACATATCCTTTGAGGGGATAGGTGGGGGAAAGACAGTTACCCAACCCCTGTCCTGGTAAGGTCCACAGCAATTCAGGGCTCTCAGGGTTCCAAAGTTACACTGTGGGCTGGGACCAGGGATGCATTTTGACTTTGGTGGGCCTCAAGCACTTTTGCCTTTGGGGGCACTTCTTACCATAAAAATACTGAAAAAAAATTTTATGACTATGGTGGTATAAAAGTAAATATTATCCAGGCTGATTTTATTATTATATGTTCATTATTACTATATCTATTTTTCTTCTGATTTTTTATTTTTATTTCTTTAACTCATTCTCTATTATTGGACATTTATTGTATCTAATTTTTTACTTTTATAAACCATGCTGTTTTCTTTTGATTTTAAAATAATTTAAAAATAAAACATTTTTGTGGGTCCTTAAAATATCACGGGCCCTAGGCACTGTGCCTACCGAGTCTACTGGGTAAGTCAGCCCTGCTTGGGACAGGGAGATTAGATTGGGGGAGAAGGACTCCTCTTCATGTCTTAGTGGGACAGTTTTAAGTTAATCAATTATTTCTTATTTCACTTATACTACCCACGTTCTCATTTTCTGGTTCCCCACCCCCTGCCCAGCACATTAATACTATGAATCGGATGTGAATGTCATTGGGGTGGAAATGGAGACAGATCAGAGAGATGGAATCGCACCCTTTCCCAGAAGACCAAGGTTTTCGTATGGGGCTCTGCTCATCAAGCTTAACTTCTTCATTCATTGGGATGTTTTCCCAAGTAACTCTCCATTACTCATGCAAATGAGATTTTGAAAAGTCTGTCCTGTCAGACATTGTCAGACATGCACCAAACATGTTTGAATCCCATTTAGACTCAAGACAGGGCTCCCTATATTTAAAAAACGTTAGGGTTATTTTTATTAATCTTTTCTTTTGATCTGTAAGAATACCTTAAAAGATGAAGAATGAGAATAAGGGGTGTTTATAAGTAGATATTGTTATTTCCACTGTCTGTGCCTTAAGTTAGGCTCTTACCAGCTTTCACTTGGATCCTTACAGTGTCTTCACGACCAACTTTCAGTTTTTACCTCCACTAAAGTTTATTCACCAGACACTAGTATTAATTTATTTTAAAATTTGGCTGGGGCCGGGCATGGTGGTTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGCGGGTGGATCATGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATAGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGATGGTACACACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAATCTGGGAGGTAGAGGTTGCAGTGAGCTGAGATCATGCCACTGCACACCAGCCTGGGCGACAGTGTGAGACTTCATCTAAAAAAAAAAAAATTTGGCTGGATACCTCCTGACTGCAGGATATAGTCGAATTCCAAACCGTAGATAGCATAGAGGGTTCTTCATAATTTGACCTTACTAGCATTATTTTTTTCTTTTTCCTTCTAATCTATTCACCAGTTGTATCAGTCAGTTAATGCTATGTAACAAACTCTCAAAACTAAGGGCTTAGTACCAAACAATATTACTATAGCTCTCACCTTTGTGGATTGGCTGGAGTCAGCTAATCTAGGCTGGGTTCTATTCTGGCTGGAGACTTTAGCTTGGTCAGCTCTGTTCCATGTGGCACATTTAGACCAGAGACCTCCATGCAATTTTATCCCCCTGGAACTAGTGGATTGACTAGGCATGCACTTCTCATAGTAACAGAAGAAGTTCAAAAGAGCAACCTGCAAGCTCTTGAGTCCTAGGGTAGGAATTGGCGCATCGTTACTTTTGGCCCATTTTACTGGCTAA	T	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_4885:HG4_PB_SVrefine2PBcRDovetail_7343:HG2_Ill_tnscope_1617:HG3_PB_SVrefine2PBcRDovetail_6979:HG3_Ill_SVrefine2DISCOVARDovetail_10509:HG2_PB_assemblyticsPBcR_7562:HG2_PB_SVrefine2PBcRplusDovetail_3227:HG2_PB_SVrefine2PB10Xhap12_10679:HG2_PB_PB10Xdip_9773:HG2_Ill_SVrefine2DISCOVARplusDovetail_3736:HG2_10X_SVrefine210Xhap12_10208:HG3_Ill_Krunchall_19504:HG2_Ill_Krunchall_19928:HG2_10X_allpass_2326:HG4_10X_allpass_2720:HG4_Ill_MetaSV_1528:HG3_Ill_MetaSV_1556:HG2_Ill_MetaSV_1442:HG4_PB_assemblyticsfalcon_7763:HG4_PB_pbsv_14725:HG3_PB_pbsv_14421:HG2_PB_pbsv_14777:HG2_Ill_breakscan11_2115;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10208:HG2_Ill_SVrefine2DISCOVARplusDovetail_3736:HG2_PB_PB10Xdip_9773:HG2_PB_SVrefine2PB10Xhap12_10679:HG2_PB_SVrefine2PBcRplusDovetail_3227:HG2_PB_assemblyticsPBcR_7562:HG3_Ill_SVrefine2DISCOVARDovetail_10509:HG3_PB_SVrefine2PBcRDovetail_6979;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00107216;ClusterMaxSizeDiff=0.00107216;ClusterMaxEditDist=0.00107216;PBcalls=10;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-4664;DistBack=-4665;DistForward=-4664;DistMin=-4665;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=14:38133149-38137813;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9994;SizeDiff=0;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=99;MatchId=1104.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:47:0|1:39:0:0:25:1|0:0:34:63:0:0/1:48:15:0/1:347:177:4647:.:.
chr14	38245235	HG3_10X_allpass_2837	CTGGGTCTTGATTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGATTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTCTTTTTAGTAGAGACGGGGTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10209:HG4_Ill_Krunchall_20247:HG2_Ill_Krunchall_19930:HG3_PB_HySA_22197:HG4_PB_assemblyticsfalcon_7765:HG3_PB_assemblyticsfalcon_7869:HG4_PB_pbsv_14727:HG2_Ill_breakscan11_2116:HG2_PB_HySA_26854:HG4_Ill_MetaSV_1529:HG2_Ill_tnscope_1618:HG4_PB_SVrefine2Falcon1Dovetail_8989:HG4_Ill_svaba_18316:HG4_Ill_scalpel_13524:HG4_Ill_manta_3454:HG4_Ill_GATKHCSBGrefine_10125:HG3_PB_pbsv_14423:HG3_PB_SVrefine2PBcRDovetail_6980:HG3_PB_SVrefine2Falcon1Dovetail_8954:HG3_Ill_svaba_18428:HG3_Ill_scalpel_14091:HG3_Ill_manta_3306:HG3_Ill_MetaSV_1557:HG3_Ill_GATKHCSBGrefine_9684:HG3_10X_allpass_2837:HG2_PB_pbsv_14779:HG2_PB_SVrefine2PBcRplusDovetail_3228:HG2_PB_SVrefine2Falcon2Bionano_7373:HG2_Ill_svaba_18284:HG2_Ill_scalpel_13853:HG2_Ill_SpiralSDKrefine_4887:HG2_Ill_SVrefine2DISCOVARplusDovetail_3738:HG2_Ill_MetaSV_1443:HG2_Ill_GATKHCSBGrefine_9803:HG2_10X_allpass_2327;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10209:HG4_PB_SVrefine2Falcon1Dovetail_8989:HG4_Ill_svaba_18316:HG4_Ill_scalpel_13524:HG4_Ill_manta_3454:HG4_Ill_GATKHCSBGrefine_10125:HG3_PB_pbsv_14423:HG3_PB_SVrefine2PBcRDovetail_6980:HG3_PB_SVrefine2Falcon1Dovetail_8954:HG3_Ill_svaba_18428:HG3_Ill_scalpel_14091:HG3_Ill_manta_3306:HG3_Ill_MetaSV_1557:HG3_Ill_GATKHCSBGrefine_9684:HG3_10X_allpass_2837:HG2_PB_pbsv_14779:HG2_PB_SVrefine2PBcRplusDovetail_3228:HG2_PB_SVrefine2Falcon2Bionano_7373:HG2_Ill_svaba_18284:HG2_Ill_scalpel_13853:HG2_Ill_SpiralSDKrefine_4887:HG2_Ill_SVrefine2DISCOVARplusDovetail_3738:HG2_Ill_MetaSV_1443:HG2_Ill_GATKHCSBGrefine_9803:HG2_10X_allpass_2327;NumExactMatchSVs=25;ClusterMaxShiftDist=0.148325;ClusterMaxSizeDiff=0.148325;ClusterMaxEditDist=0.148325;PBcalls=12;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-216;DistBack=-217;DistForward=-202;DistMin=-217;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=14:38245236-38245467;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1105.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:30:0|1:33:1:2:33:1|0:0:29:53:2:0/1:23:29:./.:.:.:.:.:.
chr14	38247548	HG3_Ill_GATKHC_23282	GGCTGGTGGTCTCTGTGTGTGCATTTGCACTGGCAGCAATGGCAGTGCAAGGCTAGGGGTGGT	G	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_9775:HG3_PB_assemblyticsfalcon_7870:HG2_PB_assemblyticsfalcon_7849:HG4_PB_pbsv_14728:HG3_PB_HySA_22198:HG4_Ill_svaba_18317:HG4_Ill_scalpel_13525:HG4_Ill_SVrefine2DISCOVARDovetail_10387:HG4_Ill_Krunchall_20248:HG4_Ill_GATKHC_23396:HG4_Ill_GATKHCSBGrefine_10126:HG4_Ill_Cortex_1050:HG4_Ill_250bpfermikitraw_19318:HG4_10X_allpass_2721:HG3_Ill_svaba_18429:HG3_Ill_scalpel_14092:HG3_Ill_Krunchall_19507:HG3_Ill_GATKHC_23282:HG3_Ill_GATKHCSBGrefine_9685:HG3_Ill_Cortex_1099:HG3_Ill_250bpfermikitraw_18999:HG3_Ill_150bpfermikitraw_18467:HG3_10X_allpass_2838:HG2_PB_pbsv_14780:HG2_PB_SVrefine2PBcRplusDovetail_3230:HG2_Ill_svaba_18285:HG2_Ill_scalpel_13854:HG2_Ill_SpiralSDKrefine_4888:HG2_Ill_Krunchall_19931:HG2_Ill_GATKHCSBGrefine_9804:HG2_Ill_Cortex_2541:HG2_Ill_250bpfermikitraw_19586:HG2_Ill_150bpfermikitraw_18454:HG2_10X_allpass_2328:HG4_PB_assemblyticsfalcon_7766:HG4_Ill_Spiral_1137:HG3_Ill_Spiral_15224:HG2_PB_HySA_26855:HG2_Ill_breakscan11_2117:HG3_PB_pbsv_14424;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_2328:HG2_Ill_150bpfermikitraw_18454:HG2_Ill_250bpfermikitraw_19586:HG2_Ill_Cortex_2541:HG2_Ill_GATKHCSBGrefine_9804:HG2_Ill_Krunchall_19931:HG2_Ill_SpiralSDKrefine_4888:HG2_Ill_scalpel_13854:HG2_Ill_svaba_18285:HG2_PB_SVrefine2PBcRplusDovetail_3230:HG2_PB_pbsv_14780:HG3_10X_allpass_2838:HG3_Ill_150bpfermikitraw_18467:HG3_Ill_250bpfermikitraw_18999:HG3_Ill_Cortex_1099:HG3_Ill_GATKHCSBGrefine_9685:HG3_Ill_GATKHC_23282:HG3_Ill_Krunchall_19507:HG3_Ill_scalpel_14092:HG3_Ill_svaba_18429:HG4_10X_allpass_2721:HG4_Ill_250bpfermikitraw_19318:HG4_Ill_Cortex_1050:HG4_Ill_GATKHCSBGrefine_10126:HG4_Ill_GATKHC_23396:HG4_Ill_Krunchall_20248:HG4_Ill_SVrefine2DISCOVARDovetail_10387:HG4_Ill_scalpel_13525:HG4_Ill_svaba_18317;NumExactMatchSVs=29;ClusterMaxShiftDist=0.1;ClusterMaxSizeDiff=0.1;ClusterMaxEditDist=0.128571;PBcalls=10;Illcalls=27;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-62;DistBack=-63;DistForward=34181;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7471;REFWIDENED=14:38241260-38255081;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1106.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:30:0|1:31:5:5:25:1|0:0:18:42:0:0/1:30:23:./.:.:.:.:.:.
chr14	39004518	HG2_PB_assemblyticsfalcon_7852	AATGACCCAAAATAAGAATAATAGGGTCAAACAAGCAGAATCTCATCATTCTCACAAGTGACTGTAAAGAAAAAACAATTCATATGAGAGCTCTGGATTCTAAAACCTGATAAATTTTCCCAGATTTAAATAGACTCATTTTCAAGAGGGGTATGTAAAATTATTTAATGATCAGTTGGCTCAACACAAGGAACTATTTGGCAGGAGTACTTTATCAGTTTTAACAAGTATGACTTGCTCTACTAGTGTCTTACAAGATGCATACTTCATTATCTTATGGGTCCTGGCCATTGGCACATAGACTCTAATGAATCATAGTTTAGATTTCAAGGATGCTTTTTCAAGGATGCAACACTGAGGTGGGGCTCCCAACAGGCATTACCCCAGCAAATGAGGCCAAAGACCACAGCTAAAGTGATCTTAACCATGTTGAAGAATTCTGAAGGTAAAATTCTCAAGCTCAATCTAAATGAGCCCCATAGAAGGATGATTTATTACCAAAGGACATAG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1444:HG3_PB_SVrefine2PBcRDovetail_6982:HG2_PB_SVrefine2PB10Xhap12_10682:HG2_PB_pbsv_14783:HG2_Ill_tnscope_1619:HG4_Ill_Cortex_1052:HG3_Ill_manta_3307:HG3_Ill_SVrefine2DISCOVARDovetail_10512:HG3_Ill_GATKHCSBGrefine_9687:HG3_Ill_Cortex_1101:HG3_10X_allpass_2840:HG2_PB_assemblyticsfalcon_7852:HG2_PB_SVrefine2Falcon1plusDovetail_3442:HG2_Ill_manta_4054:HG2_Ill_breakscan11_2118:HG2_Ill_SpiralSDKrefine_4891:HG2_Ill_SVrefine2DISCOVARplusDovetail_3740:HG2_Ill_GATKHCSBGrefine_9805:HG2_Ill_Cortex_2543:HG2_10X_allpass_2329:HG2_10X_SVrefine210Xhap12_10210:HG3_Ill_Spiral_15229:HG2_Ill_Spiral_976:HG3_Ill_Krunchall_19512:HG2_Ill_Krunchall_19936:HG3_PB_pbsv_14427:HG3_Ill_MetaSV_1559;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10210:HG2_10X_allpass_2329:HG2_Ill_Cortex_2543:HG2_Ill_GATKHCSBGrefine_9805:HG2_Ill_SVrefine2DISCOVARplusDovetail_3740:HG2_Ill_SpiralSDKrefine_4891:HG2_Ill_breakscan11_2118:HG2_Ill_manta_4054:HG2_PB_SVrefine2Falcon1plusDovetail_3442:HG2_PB_assemblyticsfalcon_7852:HG3_10X_allpass_2840:HG3_Ill_Cortex_1101:HG3_Ill_GATKHCSBGrefine_9687:HG3_Ill_SVrefine2DISCOVARDovetail_10512:HG3_Ill_manta_3307:HG4_Ill_Cortex_1052;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0117417;ClusterMaxSizeDiff=0.0117417;ClusterMaxEditDist=0.0117417;PBcalls=6;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-509;DistBack=-500;DistForward=16778;DistMin=-500;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=14:39004519-39005027;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1107.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:24:0|1:37:0:1:19:1|0:0:27:81:0:0/1:74:26:0/1:32:14:.:.:0.959248
chr14	39059171	HG2_Ill_SpiralSDKrefine_4894	GGGAAGGGAAGGAAGAAAGGGAAGGAGGAAGGGAAGGAAGAAAGGGAAGGA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_14784:HG4_PB_HySA_21481:HG4_PB_pbsv_14730:HG3_PB_pbsv_14428:HG4_PB_SVrefine2Falcon1Dovetail_8992:HG4_Ill_SVrefine2DISCOVARDovetail_10389:HG4_Ill_250bpfermikitraw_19323:HG3_Ill_250bpfermikitraw_19007:HG2_PB_SVrefine2PBcRplusDovetail_3232:HG2_PB_SVrefine2Falcon2Bionano_7375:HG2_PB_SVrefine2Falcon1plusDovetail_3443:HG2_Ill_SpiralSDKrefine_4894:HG2_Ill_SVrefine2DISCOVARplusDovetail_3741:HG2_Ill_250bpfermikitraw_19592;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19592:HG2_Ill_SVrefine2DISCOVARplusDovetail_3741:HG2_Ill_SpiralSDKrefine_4894:HG2_PB_SVrefine2Falcon1plusDovetail_3443:HG2_PB_SVrefine2Falcon2Bionano_7375:HG2_PB_SVrefine2PBcRplusDovetail_3232:HG3_Ill_250bpfermikitraw_19007:HG4_Ill_250bpfermikitraw_19323:HG4_Ill_SVrefine2DISCOVARDovetail_10389:HG4_PB_SVrefine2Falcon1Dovetail_8992;NumExactMatchSVs=10;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.08;PBcalls=8;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=11979;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=113;REFWIDENED=14:39059172-39059334;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1108.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:24:0|1:27:1:1:25:./.:1:4:9:1:0/1:12:12:./.:.:.:.:.:.
chr14	40098391	HG2_PB_pbsv_14791	CAGAGTCCTGAAATAACTTTTTTTTTTTATTATTATTATTTTTTTATTATACTCTAAGTTTTAGGATACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTTTCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGTATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTTCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTCTAGTTTAATTAGATCCCATTTGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAATTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACAGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCAGATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10215:HG2_10X_allpass_2330:HG4_Ill_Krunchall_20259:HG2_Ill_Krunchall_19946:HG2_Ill_tnscope_1620:HG4_PB_pbsv_14737:HG4_PB_SVrefine2Falcon1Dovetail_8995:HG4_Ill_MetaSV_1531:HG4_10X_allpass_2723:HG3_PB_assemblyticsfalcon_7884:HG3_PB_SVrefine2Falcon1Dovetail_8961:HG2_PB_pbsv_14791:HG2_PB_SVrefine2PBcRplusDovetail_3234:HG2_PB_SVrefine2PB10Xhap12_10684:HG2_PB_SVrefine2Falcon1plusDovetail_3446:HG2_Ill_breakscan11_2119:HG2_Ill_MetaSV_1445:HG2_Ill_GATKHCSBGrefine_9809;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10215:HG4_PB_pbsv_14737:HG4_PB_SVrefine2Falcon1Dovetail_8995:HG4_Ill_MetaSV_1531:HG4_10X_allpass_2723:HG3_PB_assemblyticsfalcon_7884:HG3_PB_SVrefine2Falcon1Dovetail_8961:HG2_PB_pbsv_14791:HG2_PB_SVrefine2PBcRplusDovetail_3234:HG2_PB_SVrefine2PB10Xhap12_10684:HG2_PB_SVrefine2Falcon1plusDovetail_3446:HG2_Ill_breakscan11_2119:HG2_Ill_MetaSV_1445:HG2_Ill_GATKHCSBGrefine_9809;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0121346;ClusterMaxSizeDiff=0.0121346;ClusterMaxEditDist=0.0121346;PBcalls=8;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1822;DistBack=177909;DistForward=-1816;DistMin=-1816;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=14:40098392-40100231;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1109.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:37:0|1:53:0:0:34:0|1:40:0:0:22:0/1:55:16:0/1:145:62:1727:.:.
chr14	41951862	HG3_Ill_svaba_18455	CCTCCCAAAGTTCTGAGATTACAGATGTGAGCCATTGTGGTCAGCCTAGAAAATTGTGTGAAACAAA	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_19620:HG3_PB_HySA_22225:HG2_PB_assemblyticsfalcon_7876:HG2_PB_pbsv_14799:HG4_PB_HySA_21503:HG4_PB_pbsv_14742:HG3_PB_pbsv_14441:HG2_PB_HySA_26897:HG4_PB_assemblyticsfalcon_7790:HG4_Ill_svaba_18337:HG4_Ill_scalpel_13547:HG4_Ill_Krunchall_20277:HG4_Ill_GATKHCSBGrefine_10134:HG4_Ill_250bpfermikitraw_19346:HG3_PB_assemblyticsfalcon_7898:HG3_Ill_svaba_18455:HG3_Ill_manta_3311:HG3_Ill_Krunchall_19542:HG3_Ill_GATKHCSBGrefine_9701:HG3_Ill_250bpfermikitraw_19033:HG3_Ill_150bpfermikitraw_18502:HG3_10X_allpass_2843:HG2_Ill_svaba_18311:HG2_Ill_Krunchall_19965:HG2_Ill_GATKHCSBGrefine_9815;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19620:HG4_PB_assemblyticsfalcon_7790:HG4_Ill_svaba_18337:HG4_Ill_scalpel_13547:HG4_Ill_Krunchall_20277:HG4_Ill_GATKHCSBGrefine_10134:HG4_Ill_250bpfermikitraw_19346:HG3_PB_assemblyticsfalcon_7898:HG3_Ill_svaba_18455:HG3_Ill_manta_3311:HG3_Ill_Krunchall_19542:HG3_Ill_GATKHCSBGrefine_9701:HG3_Ill_250bpfermikitraw_19033:HG3_Ill_150bpfermikitraw_18502:HG3_10X_allpass_2843:HG2_Ill_svaba_18311:HG2_Ill_Krunchall_19965:HG2_Ill_GATKHCSBGrefine_9815;NumExactMatchSVs=18;ClusterMaxShiftDist=0.075188;ClusterMaxSizeDiff=0.075188;ClusterMaxEditDist=0.075188;PBcalls=9;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-66;DistBack=12955;DistForward=56688;DistMin=12955;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=67;REFWIDENED=14:41951863-41951995;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1110.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:26:0:1:30:1|0:0:9:27:2:0/1:20:12:./.:.:.:.:.:.
chr14	42761076	HG3_10X_allpass_2846	CAAAATAAAAAATTTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGCAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCAAGATTGTGCCACTGCAATCCGGCCTGGGCTAAAGAGCGGGACTCCGTCTCAAAAAAAAAAAAAAATAAAAAAAATAAAAAAATAAAAAAAAAATAAAAT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_14749:HG4_10X_allpass_2725:HG4_PB_SVrefine2Falcon1Dovetail_9000:HG4_PB_assemblyticsfalcon_7796:HG3_PB_assemblyticsfalcon_7907:HG2_PB_HySA_26904:HG3_PB_pbsv_14447:HG2_PB_pbsv_14802:HG4_Ill_MetaSV_1537:HG3_Ill_MetaSV_1566:HG2_Ill_tnscope_1623:HG2_Ill_MetaSV_1450:HG4_PB_HySA_21515:HG4_Ill_manta_3460:HG4_Ill_SVrefine2DISCOVARDovetail_10397:HG4_Ill_GATKHCSBGrefine_10141:HG3_PB_SVrefine2PBcRDovetail_6991:HG3_PB_SVrefine2Falcon1Dovetail_8968:HG3_Ill_manta_3314:HG3_Ill_GATKHCSBGrefine_9708:HG3_10X_allpass_2846:HG2_PB_SVrefine2PB10Xhap12_10689:HG2_Ill_manta_4060:HG2_Ill_SVrefine2DISCOVARplusDovetail_3759:HG2_Ill_GATKHCSBGrefine_9816;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9816:HG2_Ill_SVrefine2DISCOVARplusDovetail_3759:HG2_Ill_manta_4060:HG2_PB_SVrefine2PB10Xhap12_10689:HG3_10X_allpass_2846:HG3_Ill_GATKHCSBGrefine_9708:HG3_Ill_manta_3314:HG3_PB_SVrefine2Falcon1Dovetail_8968:HG3_PB_SVrefine2PBcRDovetail_6991:HG4_Ill_GATKHCSBGrefine_10141:HG4_Ill_SVrefine2DISCOVARDovetail_10397:HG4_Ill_manta_3460:HG4_PB_HySA_21515;NumExactMatchSVs=13;ClusterMaxShiftDist=0.085044;ClusterMaxSizeDiff=0.085044;ClusterMaxEditDist=0.085044;PBcalls=11;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-347;DistBack=-359;DistForward=-333;DistMin=-359;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=14:42761077-42761438;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1111.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:29:0|1:35:3:0:27:1|0:0:23:35:0:0/1:28:12:./.:40:4:.:.:.
chr14	43549925	HG2_Ill_150bpfermikitraw_18504	ACACAAATGTATTGATAGCTTTATTTAAAAGGTTAATTCATCATATTTTTGTCTGTGTAGGGTAGGAATGTGAAAT	A	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_10539:HG3_PB_HySA_22249:HG4_PB_pbsv_14755:HG3_PB_pbsv_14452:HG4_PB_assemblyticsfalcon_7805:HG4_PB_HySA_21524:HG2_PB_HySA_26912:HG2_PB_pbsv_14807:HG2_PB_assemblyticsPBcR_7606:HG4_Ill_svaba_18350:HG4_Ill_scalpel_13558:HG4_Ill_manta_3463:HG4_Ill_GATKHCSBGrefine_10146:HG4_Ill_250bpfermikitraw_19362:HG4_Ill_150bpfermikitraw_18645:HG3_Ill_svaba_18473:HG3_Ill_scalpel_14130:HG3_Ill_manta_3316:HG3_Ill_GATKHCSBGrefine_9712:HG3_Ill_250bpfermikitraw_19056:HG3_Ill_150bpfermikitraw_18525:HG2_PB_assemblyticsfalcon_7889:HG2_Ill_svaba_18322:HG2_Ill_scalpel_13889:HG2_Ill_manta_4062:HG2_Ill_SpiralSDKrefine_4920:HG2_Ill_GATKHCSBGrefine_9819:HG2_Ill_250bpfermikitraw_19635:HG2_Ill_150bpfermikitraw_18504:HG4_PB_SVrefine2PBcRDovetail_7354:HG3_PB_SVrefine2PBcRDovetail_6995:HG3_PB_SVrefine2Falcon1Dovetail_8969;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18504:HG2_Ill_250bpfermikitraw_19635:HG2_Ill_GATKHCSBGrefine_9819:HG2_Ill_SpiralSDKrefine_4920:HG2_Ill_manta_4062:HG2_Ill_scalpel_13889:HG2_Ill_svaba_18322:HG2_PB_assemblyticsfalcon_7889:HG3_Ill_150bpfermikitraw_18525:HG3_Ill_250bpfermikitraw_19056:HG3_Ill_GATKHCSBGrefine_9712:HG3_Ill_manta_3316:HG3_Ill_scalpel_14130:HG3_Ill_svaba_18473:HG4_Ill_150bpfermikitraw_18645:HG4_Ill_250bpfermikitraw_19362:HG4_Ill_GATKHCSBGrefine_10146:HG4_Ill_manta_3463:HG4_Ill_scalpel_13558:HG4_Ill_svaba_18350;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0533333;ClusterMaxSizeDiff=0.0533333;ClusterMaxEditDist=0.0671141;PBcalls=12;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-75;DistBack=7;DistForward=6522;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=84;REFWIDENED=14:43549919-43550077;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1112.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:2:16:0:11:1/1:0:10:0:11:1/1:0:24:./.:.:.:.:.:.
chr14	43899449	HG2_Ill_manta_4063	ATTCTCAAATAACAAAATGATATACAATCTATTCATATGCTAGCCCAATTAACTTTGGCTAATGAGAATAAAGAACCAAAAGTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10231:HG2_PB_HySA_26915:HG4_PB_HySA_21525:HG4_Ill_Spiral_1140:HG3_Ill_Spiral_15265:HG2_Ill_Spiral_977:HG4_PB_pbsv_14756:HG3_PB_pbsv_14453:HG3_PB_HySA_22250:HG4_Ill_svaba_18353:HG4_Ill_manta_3464:HG4_Ill_Krunchall_20299:HG4_Ill_GATKHC_23445:HG4_Ill_GATKHCSBGrefine_10147:HG4_Ill_Cortex_1059:HG4_Ill_250bpfermikitraw_19366:HG4_Ill_150bpfermikitraw_18649:HG3_Ill_svaba_18475:HG3_Ill_scalpel_14132:HG3_Ill_manta_3317:HG3_Ill_Krunchall_19564:HG3_Ill_GATKHC_23340:HG3_Ill_GATKHCSBGrefine_9713:HG3_Ill_Cortex_1107:HG3_Ill_250bpfermikitraw_19058:HG3_Ill_150bpfermikitraw_18527:HG2_PB_pbsv_14808:HG2_PB_assemblyticsfalcon_7892:HG2_Ill_svaba_18325:HG2_Ill_scalpel_13893:HG2_Ill_manta_4063:HG2_Ill_SpiralSDKrefine_4921:HG2_Ill_Krunchall_19986:HG2_Ill_GATKHC_23498:HG2_Ill_GATKHCSBGrefine_9820:HG2_Ill_Cortex_2563:HG2_Ill_250bpfermikitraw_19639:HG2_Ill_150bpfermikitraw_18508:HG2_PB_HySA_26914:HG4_PB_SVrefine2PBcRDovetail_7355:HG4_PB_SVrefine2Falcon1Dovetail_9002:HG4_Ill_SVrefine2DISCOVARDovetail_10406:HG3_PB_SVrefine2PBcRDovetail_6996:HG3_PB_SVrefine2Falcon1Dovetail_8970:HG3_Ill_SVrefine2DISCOVARDovetail_10540:HG2_PB_SVrefine2PB10Xhap12_10691:HG2_Ill_SVrefine2DISCOVARplusDovetail_3769;NumClusterSVs=47;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18508:HG2_Ill_250bpfermikitraw_19639:HG2_Ill_Cortex_2563:HG2_Ill_GATKHCSBGrefine_9820:HG2_Ill_GATKHC_23498:HG2_Ill_Krunchall_19986:HG2_Ill_SpiralSDKrefine_4921:HG2_Ill_manta_4063:HG2_Ill_scalpel_13893:HG2_Ill_svaba_18325:HG2_PB_assemblyticsfalcon_7892:HG2_PB_pbsv_14808:HG3_Ill_150bpfermikitraw_18527:HG3_Ill_250bpfermikitraw_19058:HG3_Ill_Cortex_1107:HG3_Ill_GATKHCSBGrefine_9713:HG3_Ill_GATKHC_23340:HG3_Ill_Krunchall_19564:HG3_Ill_manta_3317:HG3_Ill_scalpel_14132:HG3_Ill_svaba_18475:HG4_Ill_150bpfermikitraw_18649:HG4_Ill_250bpfermikitraw_19366:HG4_Ill_Cortex_1059:HG4_Ill_GATKHCSBGrefine_10147:HG4_Ill_GATKHC_23445:HG4_Ill_Krunchall_20299:HG4_Ill_manta_3464:HG4_Ill_svaba_18353;NumExactMatchSVs=29;ClusterMaxShiftDist=0.035503;ClusterMaxSizeDiff=0.035503;ClusterMaxEditDist=0.105882;PBcalls=13;Illcalls=33;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=27;TenXexactcalls=0;CGexactcalls=0;HG2count=18;HG3count=15;HG4count=14;NumTechs=3;NumTechsExact=2;SVLEN=-83;DistBack=78534;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=82;REFWIDENED=14:43899428-43899592;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1113.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:70:1/1:0:17:0:10:1/1:0:23:0:16:1/1:0:38:./.:.:.:.:.:.
chr14	46300323	HG3_Ill_scalpel_14151	TCCATATCGGGAGTAATATTACCCCCCTCTCGCCCCGTGGATATTATGAGCCATATGACAGAGGTGTGTCCACCTCCTG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_18529:HG2_PB_HySA_26937:HG2_PB_pbsv_14816:HG3_PB_pbsv_14466:HG3_Ill_svaba_18494:HG3_Ill_scalpel_14151:HG3_Ill_Krunchall_19589:HG3_Ill_GATKHC_23374:HG3_Ill_GATKHCSBGrefine_9721:HG3_Ill_250bpfermikitraw_19082:HG3_Ill_150bpfermikitraw_18554:HG3_10X_allpass_2849:HG2_Ill_svaba_18338:HG2_Ill_scalpel_13909:HG2_Ill_manta_4065:HG2_Ill_SpiralSDKrefine_4935:HG2_Ill_Krunchall_20003:HG2_Ill_GATKHC_23521:HG2_Ill_GATKHCSBGrefine_9830:HG2_Ill_250bpfermikitraw_19659;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18529:HG3_PB_pbsv_14466:HG3_Ill_svaba_18494:HG3_Ill_scalpel_14151:HG3_Ill_Krunchall_19589:HG3_Ill_GATKHC_23374:HG3_Ill_GATKHCSBGrefine_9721:HG3_Ill_250bpfermikitraw_19082:HG3_Ill_150bpfermikitraw_18554:HG3_10X_allpass_2849:HG2_Ill_svaba_18338:HG2_Ill_scalpel_13909:HG2_Ill_manta_4065:HG2_Ill_SpiralSDKrefine_4935:HG2_Ill_Krunchall_20003:HG2_Ill_GATKHC_23521:HG2_Ill_GATKHCSBGrefine_9830:HG2_Ill_250bpfermikitraw_19659;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.0253165;PBcalls=3;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-78;DistBack=7;DistForward=-61;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=144;REFWIDENED=14:46300238-46300459;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1115.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:23:./.:16:5:5:15:1|0:0:24:34:0:0/1:27:13:./.:.:.:.:.:.
chr14	46577923	HG3_10X_allpass_2850	TAAAAGCCTCCAATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2120:HG2_PB_HySA_26939:HG3_PB_HySA_22278:HG4_PB_assemblyticsfalcon_7827:HG3_PB_assemblyticsfalcon_7944:HG2_PB_assemblyticsfalcon_7917:HG2_PB_assemblyticsPBcR_7641:HG4_Ill_Krunchall_20325:HG3_Ill_Krunchall_19591:HG2_PB_pbsv_14817:HG3_PB_pbsv_14467:HG4_Ill_MetaSV_1539:HG3_Ill_MetaSV_1570:HG2_Ill_tnscope_1624:HG2_Ill_MetaSV_1454:HG4_PB_pbsv_14769:HG4_PB_SVrefine2PBcRDovetail_7360:HG4_PB_SVrefine2Falcon1Dovetail_9007:HG4_Ill_svaba_18370:HG4_Ill_scalpel_13574:HG4_Ill_manta_3467:HG4_Ill_SVrefine2DISCOVARDovetail_10413:HG4_Ill_GATKHCSBGrefine_10155:HG4_10X_allpass_2727:HG3_PB_SVrefine2PBcRDovetail_7001:HG3_PB_SVrefine2Falcon1Dovetail_8977:HG3_Ill_svaba_18497:HG3_Ill_manta_3320:HG3_Ill_SVrefine2DISCOVARDovetail_10546:HG3_Ill_GATKHCSBGrefine_9722:HG3_10X_allpass_2850:HG2_PB_SVrefine2PB10Xhap12_10698:HG2_PB_SVrefine2Falcon1plusDovetail_3450:HG2_Ill_svaba_18341:HG2_Ill_manta_4066:HG2_Ill_SVrefine2DISCOVARplusDovetail_3777:HG2_Ill_GATKHCSBGrefine_9831:HG2_10X_allpass_2332:HG2_10X_SVrefine210Xhap12_10241:HG4_PB_HySA_21547;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10241:HG2_10X_allpass_2332:HG2_Ill_GATKHCSBGrefine_9831:HG2_Ill_SVrefine2DISCOVARplusDovetail_3777:HG2_Ill_manta_4066:HG2_Ill_svaba_18341:HG2_PB_SVrefine2Falcon1plusDovetail_3450:HG2_PB_SVrefine2PB10Xhap12_10698:HG3_10X_allpass_2850:HG3_Ill_GATKHCSBGrefine_9722:HG3_Ill_SVrefine2DISCOVARDovetail_10546:HG3_Ill_manta_3320:HG3_Ill_svaba_18497:HG3_PB_SVrefine2Falcon1Dovetail_8977:HG3_PB_SVrefine2PBcRDovetail_7001:HG4_10X_allpass_2727:HG4_Ill_GATKHCSBGrefine_10155:HG4_Ill_SVrefine2DISCOVARDovetail_10413:HG4_Ill_manta_3467:HG4_Ill_scalpel_13574:HG4_Ill_svaba_18370:HG4_PB_SVrefine2Falcon1Dovetail_9007:HG4_PB_SVrefine2PBcRDovetail_7360:HG4_PB_pbsv_14769;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0953895;ClusterMaxSizeDiff=0.0953895;ClusterMaxEditDist=0.0953895;PBcalls=16;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=26794;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=14:46577924-46578258;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1116.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:64:1/1:0:28:0:27:1/1:0:19:0:10:1/1:0:34:1/1:1:12:.:.:.
chr14	48334241	HG2_10X_SVrefine210Xhap12_10242	TAAAAAACATTTTGGCCGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGAGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_978:HG4_Ill_Krunchall_20342:HG3_Ill_Krunchall_19614:HG2_Ill_Krunchall_20024:HG4_PB_assemblyticsfalcon_7843:HG2_PB_assemblyticsfalcon_7932:HG3_PB_assemblyticsfalcon_7957:HG4_Ill_Spiral_1143:HG3_Ill_Spiral_15308:HG3_PB_pbsv_14472:HG2_PB_pbsv_14820:HG4_Ill_MetaSV_1540:HG3_Ill_MetaSV_1572:HG2_Ill_tnscope_1626:HG4_PB_SVrefine2Falcon1Dovetail_9011:HG4_Ill_manta_3468:HG4_Ill_SVrefine2DISCOVARDovetail_10418:HG4_Ill_GATKHCSBGrefine_10159:HG4_10X_allpass_2729:HG3_Ill_manta_3321:HG3_Ill_SVrefine2DISCOVARDovetail_10553:HG3_Ill_GATKHCSBGrefine_9731:HG3_10X_allpass_2852:HG2_PB_SVrefine2Falcon1plusDovetail_3453:HG2_Ill_manta_4067:HG2_Ill_SVrefine2DISCOVARplusDovetail_3780:HG2_Ill_MetaSV_1457:HG2_Ill_GATKHCSBGrefine_9834:HG2_10X_SVrefine210Xhap12_10242:HG4_PB_pbsv_14771:HG4_PB_SVrefine2PBcRDovetail_7363:HG3_PB_SVrefine2PBcRDovetail_7002:HG3_PB_SVrefine2Falcon1Dovetail_8980:HG2_Ill_breakscan11_2121;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10242:HG2_Ill_GATKHCSBGrefine_9834:HG2_Ill_MetaSV_1457:HG2_Ill_SVrefine2DISCOVARplusDovetail_3780:HG2_Ill_manta_4067:HG2_PB_SVrefine2Falcon1plusDovetail_3453:HG3_10X_allpass_2852:HG3_Ill_GATKHCSBGrefine_9731:HG3_Ill_SVrefine2DISCOVARDovetail_10553:HG3_Ill_manta_3321:HG4_10X_allpass_2729:HG4_Ill_GATKHCSBGrefine_10159:HG4_Ill_SVrefine2DISCOVARDovetail_10418:HG4_Ill_manta_3468:HG4_PB_SVrefine2Falcon1Dovetail_9011;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0936995;ClusterMaxSizeDiff=0.0936995;ClusterMaxEditDist=0.0936995;PBcalls=11;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=3239;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=14:48334242-48334570;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1117.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:68:0|1:41:0:1:67:1|0:0:15:40:0:0/1:24:22:0/1:32:5:.:.:.
chr14	49958443	HG2_Ill_scalpel_13932	AGACTAATTATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTAAG	A	20	PASS	ClusterIDs=HG4_Ill_Spiral_1146:HG2_PB_assemblyticsPBcR_7679:HG2_PB_assemblyticsfalcon_7948:HG4_Ill_Krunchall_20353:HG3_Ill_Krunchall_19629:HG2_Ill_Krunchall_20037:HG3_Ill_Spiral_15319:HG2_Ill_Spiral_980:HG4_PB_pbsv_14777:HG2_PB_pbsv_14826:HG4_PB_HySA_21575:HG2_Ill_MetaSV_1459:HG4_PB_assemblyticsfalcon_7859:HG4_PB_SVrefine2PBcRDovetail_7368:HG4_PB_SVrefine2Falcon1Dovetail_9017:HG4_Ill_scalpel_13594:HG4_Ill_manta_3470:HG4_Ill_GATKHCSBGrefine_10182:HG4_10X_allpass_2730:HG3_PB_pbsv_14479:HG3_PB_SVrefine2PBcRDovetail_7007:HG3_Ill_scalpel_14180:HG3_Ill_manta_3323:HG3_Ill_SVrefine2DISCOVARDovetail_10568:HG3_Ill_GATKHC_23412:HG3_Ill_GATKHCSBGrefine_9736:HG3_10X_allpass_2853:HG2_PB_SVrefine2PB10Xhap12_10707:HG2_PB_SVrefine2Falcon1plusDovetail_3459:HG2_Ill_scalpel_13932:HG2_Ill_manta_4069:HG2_Ill_SVrefine2DISCOVARplusDovetail_3789:HG2_Ill_GATKHCSBGrefine_9840:HG2_10X_allpass_2333:HG2_10X_SVrefine210Xhap12_10247;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10247:HG2_10X_allpass_2333:HG2_Ill_GATKHCSBGrefine_9840:HG2_Ill_SVrefine2DISCOVARplusDovetail_3789:HG2_Ill_manta_4069:HG2_Ill_scalpel_13932:HG2_PB_SVrefine2Falcon1plusDovetail_3459:HG2_PB_SVrefine2PB10Xhap12_10707:HG3_10X_allpass_2853:HG3_Ill_GATKHCSBGrefine_9736:HG3_Ill_GATKHC_23412:HG3_Ill_SVrefine2DISCOVARDovetail_10568:HG3_Ill_manta_3323:HG3_Ill_scalpel_14180:HG3_PB_SVrefine2PBcRDovetail_7007:HG3_PB_pbsv_14479:HG4_10X_allpass_2730:HG4_Ill_GATKHCSBGrefine_10182:HG4_Ill_manta_3470:HG4_Ill_scalpel_13594:HG4_PB_SVrefine2Falcon1Dovetail_9017:HG4_PB_SVrefine2PBcRDovetail_7368:HG4_PB_assemblyticsfalcon_7859;NumExactMatchSVs=23;ClusterMaxShiftDist=0.176678;ClusterMaxSizeDiff=0.176678;ClusterMaxEditDist=0.176678;PBcalls=12;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-146;DistBack=21647;DistForward=-131;DistMin=-131;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=14:49958444-49958602;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1118.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:45:0|1:39:12:4:34:1|0:0:17:27:0:0/1:21:16:./.:.:.:.:.:.
chr14	50000947	HG2_Ill_svaba_18368	CAGGGTGTTTTCTTATAATAGAAAAGCATCCCTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACA	C	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_9841:HG3_PB_HySA_22324:HG2_PB_HySA_26971:HG3_PB_pbsv_14481:HG3_PB_SVrefine2PBcRDovetail_7008:HG3_Ill_svaba_18532:HG3_Ill_MetaSV_1575:HG3_Ill_GATKHCSBGrefine_9737:HG3_10X_allpass_2854:HG2_PB_pbsv_14827:HG2_Ill_svaba_18368:HG2_Ill_scalpel_13934:HG2_Ill_MetaSV_1460;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_9841:HG3_PB_pbsv_14481:HG3_PB_SVrefine2PBcRDovetail_7008:HG3_Ill_svaba_18532:HG3_Ill_MetaSV_1575:HG3_Ill_GATKHCSBGrefine_9737:HG3_10X_allpass_2854:HG2_PB_pbsv_14827:HG2_Ill_svaba_18368:HG2_Ill_scalpel_13934:HG2_Ill_MetaSV_1460;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00766284;ClusterMaxSizeDiff=0.00766284;ClusterMaxEditDist=0.00766284;PBcalls=5;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-129;DistBack=9525;DistForward=-127;DistMin=-127;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=14:50000948-50001080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1119.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:1|0:1:24:25:1:1|0:0:17:32:0:0/1:42:17:./.:.:.:.:.:.
chr14	50003261	HG4_Ill_svaba_18392	CCTAAACCTAAAATAAAAGGTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCTGGGCA	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_18564:HG4_Ill_GATKHC_23501:HG4_Ill_GATKHCSBGrefine_10183:HG4_CG_vcfBeta_9330:HG3_Ill_GATKHC_23414:HG3_CG_vcfBeta_7890:HG2_Ill_GATKHC_23553:HG2_Ill_GATKHCSBGrefine_9842:HG2_CG_vcfBeta_8283:HG2_PB_HySA_26972:HG4_Ill_SVrefine2DISCOVARDovetail_10426:HG3_PB_SVrefine2PBcRDovetail_7009:HG3_Ill_SVrefine2DISCOVARDovetail_10570:HG2_PB_assemblyticsfalcon_7951:HG2_PB_SVrefine2PB10Xhap12_10708:HG2_PB_SVrefine2Falcon1plusDovetail_3460:HG2_PB_PB10Xdip_9827:HG2_PB_PB10Xdip_9826:HG2_Ill_SVrefine2DISCOVARplusDovetail_3790:HG2_10X_SVrefine210Xhap12_10248:HG4_10X_allpass_2731:HG3_10X_allpass_2855:HG2_10X_allpass_2334:HG4_Ill_Spiral_1147:HG3_Ill_Spiral_15322:HG2_Ill_Spiral_981:HG3_PB_pbsv_14482:HG2_PB_pbsv_14828:HG2_Ill_SpiralSDKrefine_4960:HG4_PB_pbsv_14778:HG4_Ill_svaba_18392:HG4_Ill_scalpel_13597:HG4_Ill_Krunchall_20356:HG4_Ill_250bpfermikitraw_19416:HG4_Ill_150bpfermikitraw_18699:HG3_Ill_svaba_18533:HG3_Ill_scalpel_14182:HG3_Ill_Krunchall_19630:HG3_Ill_250bpfermikitraw_19119:HG3_Ill_150bpfermikitraw_18589:HG2_Ill_svaba_18369:HG2_Ill_scalpel_13935:HG2_Ill_Krunchall_20040:HG2_Ill_250bpfermikitraw_19695;NumClusterSVs=44;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18564:HG4_Ill_svaba_18392:HG4_Ill_scalpel_13597:HG4_Ill_Krunchall_20356:HG4_Ill_250bpfermikitraw_19416:HG4_Ill_150bpfermikitraw_18699:HG3_Ill_svaba_18533:HG3_Ill_scalpel_14182:HG3_Ill_Krunchall_19630:HG3_Ill_250bpfermikitraw_19119:HG3_Ill_150bpfermikitraw_18589:HG2_Ill_svaba_18369:HG2_Ill_scalpel_13935:HG2_Ill_Krunchall_20040:HG2_Ill_250bpfermikitraw_19695;NumExactMatchSVs=15;ClusterMaxShiftDist=0.201183;ClusterMaxSizeDiff=0.201183;ClusterMaxEditDist=0.201183;PBcalls=10;Illcalls=27;TenXcalls=4;CGcalls=3;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=12;NumTechs=4;NumTechsExact=1;SVLEN=-78;DistBack=-63;DistForward=-59;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=14:50003260-50003341;PctSeqSimilarity=0.8814;PctSizeSimilarity=0.8478;PctRecOverlap=0.8387;SizeDiff=-14;StartDistance=-1;EndDistance=-15;GTMatch=0;TruScore=85;MatchId=1120.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:41:1/1:2:23:2:14:./.:6:15:9:7:0/1:9:31:./.:.:.:.:.:.
chr14	51601404	HG2_Ill_manta_4071	TTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_14490:HG2_Ill_Krunchall_20048:HG3_PB_SVrefine2PBcRDovetail_7017:HG3_PB_HySA_22335:HG3_Ill_scalpel_14193:HG3_Ill_MetaSV_1581:HG3_Ill_GATKHCSBGrefine_9741:HG2_PB_SVrefine2Falcon1plusDovetail_3468:HG2_Ill_scalpel_13944:HG2_Ill_manta_4071:HG2_Ill_breakscan11_2123:HG2_Ill_GATKHCSBGrefine_9846:HG2_10X_SVrefine210Xhap12_10253:HG2_PB_HySA_26986:HG2_Ill_MetaSV_1466:HG4_PB_assemblyticsfalcon_7875:HG4_PB_SVrefine2Falcon1Dovetail_9025:HG3_PB_assemblyticsfalcon_7988:HG3_PB_SVrefine2Falcon1Dovetail_8992:HG2_PB_pbsv_14835;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10253:HG2_Ill_GATKHCSBGrefine_9846:HG2_Ill_breakscan11_2123:HG2_Ill_manta_4071:HG2_Ill_scalpel_13944:HG2_PB_SVrefine2Falcon1plusDovetail_3468:HG3_Ill_GATKHCSBGrefine_9741:HG3_Ill_MetaSV_1581:HG3_Ill_scalpel_14193:HG3_PB_HySA_22335:HG3_PB_SVrefine2PBcRDovetail_7017;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00985222;ClusterMaxSizeDiff=0.00985222;ClusterMaxEditDist=0.00990099;PBcalls=10;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-303;DistBack=7090;DistForward=-281;DistMin=-281;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=14:51601405-51601716;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1121.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:30:0|1:38:0:0:35:1|0:0:31:32:0:0/1:20:13:0/1:27:10:.:.:.
chr14	51610946	HG3_Ill_150bpfermikitraw_18597	CATATATATATATATATATACGTATATATATATATATATGTATATATATATATATATATGTATGTGTAT	C	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_7876:HG3_PB_assemblyticsfalcon_7989:HG2_PB_assemblyticsfalcon_7967:HG3_Ill_Krunchall_19637:HG3_Ill_GATKHCSBGrefine_9742:HG3_Ill_250bpfermikitraw_19124:HG3_Ill_150bpfermikitraw_18597:HG2_Ill_svaba_18379:HG2_Ill_GATKHCSBGrefine_9847:HG2_Ill_250bpfermikitraw_19701:HG2_Ill_150bpfermikitraw_18573:HG3_PB_pbsv_14491:HG2_PB_pbsv_14836:HG3_Ill_manta_3326:HG2_Ill_manta_4072;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18573:HG2_Ill_250bpfermikitraw_19701:HG2_Ill_GATKHCSBGrefine_9847:HG2_Ill_svaba_18379:HG3_Ill_150bpfermikitraw_18597:HG3_Ill_250bpfermikitraw_19124:HG3_Ill_GATKHCSBGrefine_9742:HG3_Ill_Krunchall_19637;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0857143;ClusterMaxSizeDiff=0.0857143;ClusterMaxEditDist=0.0857143;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-68;DistBack=8909;DistForward=-24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=14:51610947-51611040;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1122.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:24:0|1:26:3:3:22:./.:3:20:36:0:0/1:23:18:./.:.:.:.:.:.
chr14	54564051	HG3_PB_pbsv_14502	CAAAACAACAGTAATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAACAAACAAACAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10259:HG2_PB_HySA_27018:HG4_Ill_Krunchall_20387:HG3_Ill_Krunchall_19660:HG2_Ill_Krunchall_20070:HG2_PB_assemblyticsPBcR_7721:HG3_PB_HySA_22358:HG4_Ill_Krunchall_20386:HG3_Ill_Krunchall_19659:HG2_PB_pbsv_14847:HG3_PB_assemblyticsfalcon_8016:HG2_PB_assemblyticsfalcon_7995:HG4_PB_pbsv_14797:HG4_Ill_MetaSV_1549:HG3_Ill_MetaSV_1584:HG2_Ill_tnscope_1628:HG2_Ill_MetaSV_1470:HG4_PB_assemblyticsfalcon_7903:HG4_PB_SVrefine2PBcRDovetail_7379:HG4_PB_SVrefine2Falcon1Dovetail_9032:HG4_Ill_scalpel_13617:HG4_Ill_manta_3474:HG4_Ill_SVrefine2DISCOVARDovetail_10448:HG4_Ill_GATKHCSBGrefine_10197:HG4_10X_allpass_2734:HG3_PB_pbsv_14502:HG3_PB_SVrefine2PBcRDovetail_7023:HG3_PB_SVrefine2Falcon1Dovetail_9001:HG3_Ill_scalpel_14212:HG3_Ill_manta_3329:HG3_Ill_SVrefine2DISCOVARDovetail_10594:HG3_Ill_GATKHCSBGrefine_9750:HG3_10X_allpass_2858:HG2_PB_SVrefine2PBcRplusDovetail_3241:HG2_PB_SVrefine2PB10Xhap12_10720:HG2_PB_SVrefine2Falcon1plusDovetail_3475:HG2_Ill_scalpel_13962:HG2_Ill_manta_4075:HG2_Ill_breakscan11_2126:HG2_Ill_SVrefine2DISCOVARplusDovetail_3819:HG2_Ill_GATKHCSBGrefine_9857:HG2_10X_allpass_2338;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10259:HG4_PB_assemblyticsfalcon_7903:HG4_PB_SVrefine2PBcRDovetail_7379:HG4_PB_SVrefine2Falcon1Dovetail_9032:HG4_Ill_scalpel_13617:HG4_Ill_manta_3474:HG4_Ill_SVrefine2DISCOVARDovetail_10448:HG4_Ill_GATKHCSBGrefine_10197:HG4_10X_allpass_2734:HG3_PB_pbsv_14502:HG3_PB_SVrefine2PBcRDovetail_7023:HG3_PB_SVrefine2Falcon1Dovetail_9001:HG3_Ill_scalpel_14212:HG3_Ill_manta_3329:HG3_Ill_SVrefine2DISCOVARDovetail_10594:HG3_Ill_GATKHCSBGrefine_9750:HG3_10X_allpass_2858:HG2_PB_SVrefine2PBcRplusDovetail_3241:HG2_PB_SVrefine2PB10Xhap12_10720:HG2_PB_SVrefine2Falcon1plusDovetail_3475:HG2_Ill_scalpel_13962:HG2_Ill_manta_4075:HG2_Ill_breakscan11_2126:HG2_Ill_SVrefine2DISCOVARplusDovetail_3819:HG2_Ill_GATKHCSBGrefine_9857:HG2_10X_allpass_2338;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0884146;ClusterMaxSizeDiff=0.0884146;ClusterMaxEditDist=0.0884146;PBcalls=16;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-334;DistBack=-156;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=14:54564052-54564400;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1123.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:80:1/1:0:29:1:24:1/1:0:16:0:19:1/1:0:38:./.:2:13:.:.:.
chr14	59423295	HG2_Ill_GATKHCSBGrefine_9866	TGTGTGTGTGTGTGTGTGGTGTGGTGTGTGTGGGGTGTGTGTGGTGTGTGGTGTGTGTGTGGTGTCTG	T	20	PASS	ClusterIDs=HG2_PB_pbsv_14860:HG2_PB_assemblyticsfalcon_8025:HG3_Ill_svaba_18590:HG3_Ill_scalpel_14234:HG3_Ill_Krunchall_19688:HG3_Ill_GATKHC_23489:HG3_Ill_GATKHCSBGrefine_9754:HG3_Ill_250bpfermikitraw_19173:HG2_Ill_svaba_18428:HG2_Ill_scalpel_13994:HG2_Ill_SpiralSDKrefine_5002:HG2_Ill_Krunchall_20100:HG2_Ill_GATKHC_23634:HG2_Ill_GATKHCSBGrefine_9866:HG2_Ill_250bpfermikitraw_19752:HG2_Ill_150bpfermikitraw_18626:HG3_PB_pbsv_14516:HG3_Ill_SVrefine2DISCOVARDovetail_10616:HG2_10X_SVrefine210Xhap12_10270;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18626:HG2_Ill_250bpfermikitraw_19752:HG2_Ill_GATKHCSBGrefine_9866:HG2_Ill_GATKHC_23634:HG2_Ill_Krunchall_20100:HG2_Ill_SpiralSDKrefine_5002:HG2_Ill_scalpel_13994:HG2_Ill_svaba_18428:HG3_Ill_250bpfermikitraw_19173:HG3_Ill_GATKHCSBGrefine_9754:HG3_Ill_GATKHC_23489:HG3_Ill_Krunchall_19688:HG3_Ill_scalpel_14234:HG3_Ill_svaba_18590;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.103704;PBcalls=3;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-67;DistBack=68971;DistForward=5292;DistMin=5292;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=14:59423280-59423392;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1124.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:28:./.:27:14:9:14:./.:1:20:45:1:0/1:20:13:./.:.:.:.:.:.
chr14	59524681	HG2_10X_allpass_2340	TTACTATTTACATGAGAACCAAGTGTAATAAGGTGGTAGTAAGCTGACAACCTTATGTCACCCTTGACTTCTTGCATTCCTTCGCAAAAGCCACCCAACCTCTCCAAGTTTTTTACATATATATATTTAATATATATTATATATACATATAAAATTATTTGAGTG	T	20	PASS	ClusterIDs=HG2_10X_allpass_2340:HG4_Ill_GATKHCSBGrefine_10209:HG2_Ill_GATKHCSBGrefine_9868:HG2_PB_pbsv_14862:HG2_PB_SVrefine2Falcon1plusDovetail_3487;NumClusterSVs=5;ExactMatchIDs=HG2_10X_allpass_2340:HG2_PB_SVrefine2Falcon1plusDovetail_3487;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0433437;ClusterMaxSizeDiff=0.0433437;ClusterMaxEditDist=0.0496894;PBcalls=2;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-164;DistBack=3864;DistForward=-30;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=168;REFWIDENED=14:59524682-59525013;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1125.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:27:0|1:39:0:0:26:./.:30:2:0:5:0/1:47:24:./.:.:.:.:.:.
chr14	59545298	HG2_PB_SVrefine2PB10Xhap12_10734	TAAATAATACTTTTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_20103:HG3_10X_allpass_2861:HG3_PB_assemblyticsfalcon_8046:HG2_PB_pbsv_14863:HG3_Ill_MetaSV_1591:HG2_Ill_MetaSV_1475:HG4_PB_pbsv_14809:HG4_PB_assemblyticsfalcon_7928:HG4_PB_SVrefine2PBcRDovetail_7388:HG4_PB_SVrefine2Falcon1Dovetail_9039:HG4_Ill_manta_3481:HG4_Ill_SVrefine2DISCOVARDovetail_10469:HG4_Ill_GATKHCSBGrefine_10210:HG4_10X_allpass_2737:HG3_PB_pbsv_14518:HG3_PB_SVrefine2Falcon1Dovetail_9013:HG3_Ill_manta_3332:HG3_Ill_GATKHCSBGrefine_9756:HG2_PB_assemblyticsfalcon_8028:HG2_PB_SVrefine2PB10Xhap12_10734:HG2_PB_SVrefine2Falcon1plusDovetail_3488:HG2_Ill_manta_4079:HG2_Ill_GATKHCSBGrefine_9869:HG2_10X_allpass_2341:HG2_10X_SVrefine210Xhap12_10272:HG4_Ill_Krunchall_20417:HG3_Ill_Krunchall_19692;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10272:HG2_10X_allpass_2341:HG2_Ill_GATKHCSBGrefine_9869:HG2_Ill_manta_4079:HG2_PB_SVrefine2Falcon1plusDovetail_3488:HG2_PB_SVrefine2PB10Xhap12_10734:HG2_PB_assemblyticsfalcon_8028:HG3_Ill_GATKHCSBGrefine_9756:HG3_Ill_manta_3332:HG3_PB_SVrefine2Falcon1Dovetail_9013:HG3_PB_pbsv_14518:HG4_10X_allpass_2737:HG4_Ill_GATKHCSBGrefine_10210:HG4_Ill_SVrefine2DISCOVARDovetail_10469:HG4_Ill_manta_3481:HG4_PB_SVrefine2Falcon1Dovetail_9039:HG4_PB_SVrefine2PBcRDovetail_7388:HG4_PB_assemblyticsfalcon_7928:HG4_PB_pbsv_14809;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0963455;ClusterMaxSizeDiff=0.0963455;ClusterMaxEditDist=0.153333;PBcalls=11;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=-311;DistForward=-296;DistMin=-311;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=14:59545299-59545620;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1126.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:28:0|1:28:0:1:32:0|1:34:0:0:17:0/1:52:23:0/1:24:8:.:.:.
chr14	60341397	HG2_Ill_breakscan11_2127	TTATATATTATGGTTATTAATCCCTTGTCAGATGGATAATTTGCAATTTTTTTCTCTTATTCTGTGGGTTGTCTCTTCACTTAGTTGTTTCTTTTGCTGTGCAGAAGATTTTTAACTTGATGTGATCCCATTTGTCCATTTTTGCTTTGGTTGCCTGTGCTTATGGGGTATTACTCTAGAAATCTTTGCCCAGACCAATATCCTTGAGACTTTCCCCAATGTTTCAATGTTTTCTTGTTTTTGTTTGTTTGTTTGTTTGAGACTGAGTCTTGGTCTGTCACCCAGGGTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCCACCTCCCAGGCTCAAGCAAATCTCTTACCTCTGCCTCTCGAGTAGCTGGGATTACAGGTGCCTGCCACCATGCCTGGCTAATTTTTGTGTTTTTAGTAGAGACGAGGTTTCACTATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCGCCCATCTCCGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCCACCACATCTATTTGGCCCCCAGTGTTTTCTTTTAATGGTTTCCTAGCTTGAGGTCTTCAGTATAAGTCTTTCATCTATTTTGATTTGATTTTTGTATACAACAAGAGTTAGGGGTCTAGTTTCATTCTTTTGCATATGAATGTAATGTTGTCCCAGAACTATTTTTATTAAAGAGACTGTCCTTTCCCCAGTGTGTGTTCTTGGCACCTTTTTCAAAAATGAATTCACTGCAGATTAATGGATTTGTTTCTGGCTTCTCTACTCTGTTCCATTGGTCTATTTTTTTTTATGCCAGTACCATGCTGGCATGGTTTTGGTTACTATAGCTCTGTAGTACAATTCGAAGTAGGTAATGTGATTCTTCCAGTTTTGTTCTTTTTGCTCAGGGTGGCTTTTGCTATTCTGGGTCTTTTATGGTTCCACATAAATTTTAGGATTATTTTTCCTATTTCTGTGATGAGTATCATTGGTATTTTGATAGATATTTGATTGAATCTATAGATTGCTTTTGGTAGTAGGGATGTTTTAACAATACTGACTCTTTCAATCCATGAACATGGAATATCCTTCCATTTTTGTGTGTCCTCTTCAATTTCTTTCAGCAATGTTTTATAGCTTTTATTGTAGAGATCTTTCACTTCTTTGATTAAGTTTATTCCTAGGTATTTTATTTTATTTGCAGTTATTGTAAATGGGATTACTTTCTTGATTTCTTTTTCAGATTGTTTGCTGTTTGCATATAGAAATGCTACTGATTTTGGGCCGGGTGCCGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAAGCAGATCATGAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCCAGGAAGTGGAGCTTGCAGTGAGCCGAGGTTGCGCCACTGCACTCCAGCCTGGGCAACAGAGAGAGACTCCATCTCAAAAAAAAAAAAAAAGAAACGAAAAGAAAAAAGAAATGCTGCTGATTTTGTATGCTGATATTGTATCCTGCAACGCTGTAACTTTACTGAATTTTTTATCAATTCTAAGAGTTTTCCAGTGGAGAATTTACACTTTTCTAAATATAAAATCATATCATCTGCAAAACAGGGATAATTTGACTTCTTCTGTTCCAATTTGGATGTCCTTTATTTCTTTCTTTTATCTGATTGCTCCAGCAAAGACTTCCAGTACTATGCTGAATAACAGTGGTGAAAG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_14812:HG3_10X_allpass_2862:HG2_PB_SVrefine2Falcon1plusDovetail_3492:HG4_10X_allpass_2738:HG2_10X_allpass_2342:HG2_PB_assemblyticsfalcon_8037:HG4_PB_SVrefine2PBcRDovetail_7390:HG4_PB_SVrefine2Falcon1Dovetail_9042:HG4_Ill_MetaSV_1554:HG3_PB_pbsv_14523:HG3_PB_SVrefine2Falcon1Dovetail_9016:HG3_Ill_SVrefine2DISCOVARDovetail_10622:HG2_PB_pbsv_14867:HG2_PB_SVrefine2PBcRplusDovetail_3252:HG2_PB_SVrefine2PB10Xhap12_10738:HG2_Ill_breakscan11_2127:HG2_Ill_SpiralSDKrefine_5010:HG2_Ill_MetaSV_1477:HG2_10X_SVrefine210Xhap12_10274:HG4_PB_assemblyticsfalcon_7934:HG3_PB_assemblyticsfalcon_8053:HG2_PB_assemblyticsPBcR_7761:HG4_Ill_Krunchall_20423:HG2_Ill_Krunchall_20108:HG3_Ill_MetaSV_1592:HG2_Ill_tnscope_1630;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10274:HG2_Ill_MetaSV_1477:HG2_Ill_SpiralSDKrefine_5010:HG2_Ill_breakscan11_2127:HG2_PB_SVrefine2PB10Xhap12_10738:HG2_PB_SVrefine2PBcRplusDovetail_3252:HG2_PB_pbsv_14867:HG3_Ill_SVrefine2DISCOVARDovetail_10622:HG3_PB_SVrefine2Falcon1Dovetail_9016:HG3_PB_pbsv_14523:HG4_Ill_MetaSV_1554:HG4_PB_SVrefine2Falcon1Dovetail_9042:HG4_PB_SVrefine2PBcRDovetail_7390;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00379713;ClusterMaxSizeDiff=0.00379713;ClusterMaxEditDist=0.00433957;PBcalls=13;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1844;DistBack=19244;DistForward=-1844;DistMin=-1844;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=14:60341398-60343242;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1127.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:34:0|1:27:0:1:29:0|1:61:0:0:23:0/1:66:18:0/1:140:72:2070:.:.
chr14	60441811	HG3_Ill_svaba_18608	ATATATATACATATATATATGTATATATATATATGTATATATATATACATATATATATG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_18640:HG3_Ill_GATKHC_23505:HG3_Ill_GATKHCSBGrefine_9764:HG2_Ill_GATKHC_23652:HG2_Ill_GATKHCSBGrefine_9877:HG4_Ill_GATKHC_23590:HG4_Ill_GATKHCSBGrefine_10216:HG3_Ill_GATKHC_23504:HG3_Ill_GATKHCSBGrefine_9763:HG2_Ill_GATKHC_23651:HG2_Ill_GATKHCSBGrefine_9876:HG2_PB_pbsv_14869:HG3_Ill_svaba_18609:HG3_Ill_scalpel_14246:HG3_Ill_manta_3336:HG3_Ill_250bpfermikitraw_19183:HG3_Ill_150bpfermikitraw_18665:HG2_Ill_svaba_18446:HG2_Ill_scalpel_14005:HG2_Ill_manta_4085:HG2_Ill_250bpfermikitraw_19765:HG2_Ill_150bpfermikitraw_18641:HG3_PB_pbsv_14525:HG2_PB_HySA_27083:HG4_Ill_scalpel_13649:HG4_Ill_manta_3485:HG4_Ill_250bpfermikitraw_19483:HG4_Ill_150bpfermikitraw_18770:HG3_Ill_svaba_18608:HG3_Ill_scalpel_14245:HG3_Ill_150bpfermikitraw_18664:HG2_Ill_svaba_18445:HG2_Ill_scalpel_14004:HG2_Ill_250bpfermikitraw_19764;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18640:HG4_Ill_scalpel_13649:HG4_Ill_manta_3485:HG4_Ill_250bpfermikitraw_19483:HG4_Ill_150bpfermikitraw_18770:HG3_Ill_svaba_18608:HG3_Ill_scalpel_14245:HG3_Ill_150bpfermikitraw_18664:HG2_Ill_svaba_18445:HG2_Ill_scalpel_14004:HG2_Ill_250bpfermikitraw_19764;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.104348;PBcalls=3;Illcalls=31;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-58;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=14:60441808-60441895;PctSeqSimilarity=0.9652;PctSizeSimilarity=0.9508;PctRecOverlap=0.8548;SizeDiff=-3;StartDistance=9;EndDistance=6;GTMatch=0;TruScore=92;MatchId=1128.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:1/1:1:21:1:27:./.:5:13:3:13:1/1:0:25:./.:.:.:.:.:.
chr14	63723521	HG2_PB_SVrefine2PB10Xhap12_10751	GTGGCTCACGCCTGTAGTCCCAAAACTTTGGGAGGTCGAGGCAGGCGGGTCATGAGGTCAGAAGTTTGAGGCCAGCCTGACGAACATGGTGAAACTCTGTCTCTACTAACAATACAAAAATTAGCCAGGCATGGTGGCATGCACCTGTAGTCCCAGCTACTCAGGAGTCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAAGTTGCAGTGAGCCAAGATTGCACCACTGCACTCCAGCCTGGGTGATAGAGCGTGACTCTGTCCCAAAAAAAAAAGAAAAAATTAGCCAGGCATGGTGGCACATGCCTGTAGTCCCAGCTACTAAGGGGGCTGAGGCAGGAGAATTGTTTAAAACCAGGAGCTGGAGGTTGCAGTGAGACGAAATCGCACCACTGTACTCCAGCCTGGGTGACACAGTGAGACTGTCTCCAAAAAAAAAAAAAAAAAAAAAAGAGTCTCTTTACCAGCTCACCCCGACCCAGTCCCCAGCATCCCTGACCCCTATCCACTCAAGAGCCAAGCCCAGCTCAGGCTGAGTTGCCCTTCCAGGCAGAGCCAGCTTAGACAAGAAGTTTAACAATCCTCCAGAATTCATTTGGGTTTTCCCAGATGAAGGGTCATAGGTCAAGACTGATGGAAGCAGAGAGAGGCCACAGGTCAGAAAGTTATCTGAGCAACGAGGTCAGGTTAGGGCAACAATGAAGATACCGTGGAAGCTGTGAGCCAGGCCCGAACAGCCTAGGAAACCAGACTGAACCAGCCCCTTCTTCTCAGGAGGTGCTTTCAAAGATGGATTCAGGTTACAGTAGCCCACGGCTCCCTACATCCTCCTTCCTTCCTCACCATATTCCTTCCCCACCCACCCCATCCTTCTCCCCTGCAAATATGACTTTTTTCCCCTCCTCTGATTTTTTTTTTCACAAGGCTGTCATTTCTCTGCAGTTACTGGCAAAGCCACTGAATATCACCCCTCCCCAGCCTTTCTCCCGTGCCAGGTCCTGAATACCTTGCTCCACGGGGACAGAGGAGGGGAGGTGATTTCACATCCCTCCATCCAGGGGAAGTCTCAACCCCTCATCCACAGGGCTCCCTGGCACAACCTCACTTTGCCTCTAACCCATTAGTGACTGACTCCAAGAGGGCTATCATC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10751:HG3_Ill_GATKHCSBGrefine_9777:HG4_PB_pbsv_14835:HG3_PB_pbsv_14540:HG3_10X_allpass_2865:HG2_Ill_MetaSV_1483:HG2_10X_allpass_2345:HG4_PB_SVrefine2PBcRDovetail_7398:HG3_Ill_MetaSV_1600:HG2_PB_assemblyticsfalcon_8064:HG2_PB_SVrefine2Falcon1plusDovetail_3503:HG2_PB_pbsv_14886:HG2_Ill_tnscope_1633:HG4_PB_SVrefine2Falcon1Dovetail_9060:HG4_Ill_SVrefine2DISCOVARDovetail_10481:HG3_Ill_SVrefine2DISCOVARDovetail_10635;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_10751:HG4_PB_SVrefine2Falcon1Dovetail_9060:HG4_Ill_SVrefine2DISCOVARDovetail_10481:HG3_Ill_SVrefine2DISCOVARDovetail_10635;NumExactMatchSVs=4;ClusterMaxShiftDist=0.174113;ClusterMaxSizeDiff=0.174113;ClusterMaxEditDist=0.181818;PBcalls=8;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-1153;DistBack=52575;DistForward=-934;DistMin=-934;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=289;REFWIDENED=14:63723522-63724963;PctSeqSimilarity=0.9183;PctSizeSimilarity=0.9974;PctRecOverlap=0.7986;SizeDiff=-3;StartDistance=-230;EndDistance=-233;GTMatch=0;TruScore=90;MatchId=1129.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:21:0|1:34:0:0:22:./.:60:0:21:2:0/0:76:0:0/1:108:32:.:.:.
chr14	64794121	HG3_Ill_svaba_18639	ATACAAAATTAGGCCAGGCACAGTGGCTCACGCCTGTCATCCCAGCACTTTGGGAGGCCAAAGTGGGCAGATCACCTGATGTCAGGAGTTCGAGATCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10296:HG4_PB_assemblyticsfalcon_7972:HG3_PB_assemblyticsfalcon_8089:HG4_PB_pbsv_14840:HG3_PB_pbsv_14544:HG3_PB_HySA_22423:HG3_Ill_MetaSV_1601:HG4_PB_SVrefine2PBcRDovetail_7403:HG4_PB_SVrefine2Falcon1Dovetail_9063:HG4_Ill_svaba_18490:HG4_Ill_scalpel_13672:HG4_Ill_manta_3489:HG4_Ill_GATKHC_23624:HG4_Ill_GATKHCSBGrefine_10233:HG4_10X_allpass_2744:HG3_PB_SVrefine2Falcon1Dovetail_9027:HG3_Ill_svaba_18639:HG3_Ill_scalpel_14266:HG3_Ill_manta_3339:HG3_Ill_GATKHC_23539:HG3_Ill_GATKHCSBGrefine_9779:HG3_Ill_250bpfermikitraw_19214:HG3_Ill_150bpfermikitraw_18693:HG3_10X_allpass_2866:HG2_Ill_svaba_18478:HG2_Ill_scalpel_14027:HG2_Ill_GATKHC_23683:HG2_Ill_GATKHCSBGrefine_9889:HG2_10X_allpass_2346:HG4_PB_HySA_21694:HG2_PB_pbsv_14890:HG3_Ill_SVrefine2DISCOVARDovetail_10641:HG2_PB_SVrefine2PBcRplusDovetail_3267:HG2_PB_SVrefine2PB10Xhap12_10755:HG2_PB_SVrefine2Falcon1plusDovetail_3505:HG2_Ill_SVrefine2DISCOVARplusDovetail_3862;NumClusterSVs=36;ExactMatchIDs=HG2_10X_allpass_2346:HG2_Ill_GATKHCSBGrefine_9889:HG2_Ill_GATKHC_23683:HG2_Ill_scalpel_14027:HG2_Ill_svaba_18478:HG3_10X_allpass_2866:HG3_Ill_150bpfermikitraw_18693:HG3_Ill_250bpfermikitraw_19214:HG3_Ill_GATKHCSBGrefine_9779:HG3_Ill_GATKHC_23539:HG3_Ill_manta_3339:HG3_Ill_scalpel_14266:HG3_Ill_svaba_18639:HG3_PB_SVrefine2Falcon1Dovetail_9027:HG4_10X_allpass_2744:HG4_Ill_GATKHCSBGrefine_10233:HG4_Ill_GATKHC_23624:HG4_Ill_manta_3489:HG4_Ill_scalpel_13672:HG4_Ill_svaba_18490:HG4_PB_SVrefine2Falcon1Dovetail_9063:HG4_PB_SVrefine2PBcRDovetail_7403;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0296296;ClusterMaxSizeDiff=0.0296296;ClusterMaxEditDist=0.141264;PBcalls=13;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=14;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-135;DistBack=8865;DistForward=-126;DistMin=-126;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=137;REFWIDENED=14:64793997-64794268;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1130.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:0|1:22:4:1:25:1|0:0:23:44:1:0/1:44:23:./.:.:.:.:.:.
chr14	65527144	HG2_PB_pbsv_14896	TAAAAATACAAAAATAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGAGACTCCGTCTCAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10761:HG2_PB_assemblyticsfalcon_8077:HG2_PB_assemblyticsPBcR_7801:HG4_Ill_Krunchall_20460:HG4_PB_SVrefine2Falcon1Dovetail_9066:HG4_Ill_scalpel_13677:HG4_Ill_GATKHCSBGrefine_10237:HG2_PB_pbsv_14896:HG2_PB_SVrefine2PBcRplusDovetail_3272:HG2_PB_SVrefine2PB10Xhap12_10762:HG2_PB_SVrefine2Falcon2Bionano_7377:HG2_PB_SVrefine2Falcon1plusDovetail_3510:HG2_PB_HySA_27133:HG2_Ill_scalpel_14032:HG2_Ill_GATKHCSBGrefine_9891:HG2_10X_SVrefine210Xhap12_10301;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10301:HG2_Ill_GATKHCSBGrefine_9891:HG2_Ill_scalpel_14032:HG2_PB_HySA_27133:HG2_PB_SVrefine2Falcon1plusDovetail_3510:HG2_PB_SVrefine2Falcon2Bionano_7377:HG2_PB_SVrefine2PB10Xhap12_10762:HG2_PB_SVrefine2PBcRplusDovetail_3272:HG2_PB_pbsv_14896:HG4_Ill_GATKHCSBGrefine_10237:HG4_Ill_scalpel_13677:HG4_PB_SVrefine2Falcon1Dovetail_9066;NumExactMatchSVs=12;ClusterMaxShiftDist=0.149635;ClusterMaxSizeDiff=0.149635;ClusterMaxEditDist=0.149635;PBcalls=10;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-284;DistBack=23022;DistForward=-272;DistMin=-272;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=14:65527145-65527449;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1131.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:26:0|1:28:0:1:25:1|0:0:14:37:0:0/1:33:14:./.:.:.:.:.:.
chr14	65829985	HG2_Ill_150bpfermikitraw_18681	GCCCGCCACCAAGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCA	G	20	PASS	ClusterIDs=HG2_10X_allpass_2348:HG4_Ill_svaba_18496:HG2_PB_HySA_27137:HG4_Ill_250bpfermikitraw_19520:HG4_Ill_150bpfermikitraw_18806:HG3_Ill_svaba_18646:HG3_Ill_250bpfermikitraw_19221:HG3_Ill_150bpfermikitraw_18703:HG2_Ill_svaba_18486:HG2_Ill_250bpfermikitraw_19808:HG2_Ill_150bpfermikitraw_18681:HG4_Ill_manta_3490:HG3_Ill_manta_3340:HG3_Ill_Spiral_15407:HG2_PB_PB10Xdip_9993:HG2_PB_PB10Xdip_9992:HG4_10X_allpass_2746:HG3_10X_allpass_2867;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18681:HG2_Ill_250bpfermikitraw_19808:HG2_Ill_svaba_18486:HG3_Ill_150bpfermikitraw_18703:HG3_Ill_250bpfermikitraw_19221:HG3_Ill_svaba_18646:HG4_Ill_150bpfermikitraw_18806:HG4_Ill_250bpfermikitraw_19520:HG4_Ill_svaba_18496;NumExactMatchSVs=9;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.222222;PBcalls=3;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-52;DistBack=96170;DistForward=20671;DistMin=20671;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=14:65829986-65830040;PctSeqSimilarity=0.9174;PctSizeSimilarity=0.8269;PctRecOverlap=0.8302;SizeDiff=9;StartDistance=-3;EndDistance=6;GTMatch=0;TruScore=85;MatchId=1132.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:29:./.:14:5:3:22:0|1:26:0:0:24:0/1:32:20:./.:.:.:.:.:.
chr14	66159177	HG2_PB_assemblyticsPBcR_7807	ACCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCGGGGGGCTGAC	A	20	PASS	ClusterIDs=HG3_Ill_GATKHC_23553:HG4_PB_assemblyticsfalcon_7984:HG4_PB_pbsv_14846:HG3_PB_assemblyticsfalcon_8099:HG4_Ill_GATKHCSBGrefine_10242:HG2_PB_assemblyticsPBcR_7807:HG2_Ill_GATKHC_23700;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_23700:HG2_PB_assemblyticsPBcR_7807:HG4_Ill_GATKHCSBGrefine_10242;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.115385;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=16;DistForward=56695;DistMin=16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=14:66159176-66159235;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1133.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:33:0|1:35:8:2:28:./.:0:4:6:1:0/1:24:17:./.:.:.:.:.:.
chr14	66810629	HG2_Ill_GATKHCSBGrefine_9895	TTTGGGGACATTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACCCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_7987:HG3_Ill_Krunchall_19743:HG2_PB_assemblyticsPBcR_7811:HG2_PB_SVrefine2PBcRplusDovetail_3275:HG3_PB_assemblyticsfalcon_8102:HG2_Ill_breakscan11_2129:HG3_PB_SVrefine2Falcon1Dovetail_9033:HG3_Ill_scalpel_14278:HG3_Ill_manta_3342:HG3_Ill_SVrefine2DISCOVARDovetail_10647:HG3_Ill_GATKHCSBGrefine_9786:HG3_10X_allpass_2868:HG2_PB_pbsv_14900:HG2_PB_SVrefine2PB10Xhap12_10765:HG2_PB_SVrefine2Falcon2Bionano_7381:HG2_Ill_scalpel_14041:HG2_Ill_manta_4092:HG2_Ill_MetaSV_1488:HG2_Ill_GATKHCSBGrefine_9895:HG2_10X_allpass_2349:HG2_10X_SVrefine210Xhap12_10304:HG3_Ill_MetaSV_1604:HG2_Ill_tnscope_1635:HG3_PB_pbsv_14552:HG4_PB_SVrefine2Falcon1Dovetail_9069;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10304:HG2_10X_allpass_2349:HG2_Ill_GATKHCSBGrefine_9895:HG2_Ill_MetaSV_1488:HG2_Ill_manta_4092:HG2_Ill_scalpel_14041:HG2_PB_SVrefine2Falcon2Bionano_7381:HG2_PB_SVrefine2PB10Xhap12_10765:HG2_PB_pbsv_14900:HG3_10X_allpass_2868:HG3_Ill_GATKHCSBGrefine_9786:HG3_Ill_SVrefine2DISCOVARDovetail_10647:HG3_Ill_manta_3342:HG3_Ill_scalpel_14278:HG3_PB_SVrefine2Falcon1Dovetail_9033;NumExactMatchSVs=15;ClusterMaxShiftDist=0.130782;ClusterMaxSizeDiff=0.130782;ClusterMaxEditDist=0.298555;PBcalls=10;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=-832;DistForward=-312;DistMin=-832;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=14:66810630-66810956;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1134.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:0|1:29:3:1:35:0|1:49:1:0:33:0/1:39:18:0/1:20:5:.:.:.
chr14	67012222	HG2_PB_SVrefine2Falcon1plusDovetail_3514	CGGGGAGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCG	C	10	PASS	ClusterIDs=HG2_PB_pbsv_14902:HG2_PB_assemblyticsfalcon_8087:HG2_PB_SVrefine2Falcon2Bionano_7384:HG2_PB_SVrefine2Falcon1plusDovetail_3514:HG3_PB_pbsv_14554;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3514:HG2_PB_SVrefine2Falcon2Bionano_7384;NumExactMatchSVs=2;ClusterMaxShiftDist=0.020202;ClusterMaxSizeDiff=0.020202;ClusterMaxEditDist=0.0707071;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-99;DistBack=-42;DistForward=170;DistMin=-42;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=330;REFWIDENED=14:67012191-67012619;PctSeqSimilarity=0.9936;PctSizeSimilarity=0.9899;PctRecOverlap=0.72;SizeDiff=1;StartDistance=27;EndDistance=28;GTMatch=0;TruScore=90;MatchId=1135.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:24:0|1:19:1:1:22:./.:7:1:0:1:0/1:16:9:./.:.:.:.:.:.
chr14	68603031	HG2_10X_allpass_2350	ACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGGTGGATCACGAGGTCAAGAGATCGAGACCATCCTGTCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGAGCATGGTGGCACATGCCTGGAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCTGAGATCACACCACTGCACTGTAGTGTGGTGACAAATGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTAGACCAGCCATACTTTTAAAAGCTTATTGTAACAAACACATACTGCTTATTCCATGCTGGTGTGTTTTGTGTTCTTTGCAAATGTTAACTAATTAAATCCTGACAATAAACCTATTAAGATAGATATTATTAACCTCATTTTACAGATGATGAAACTGAGACAGAGGGAGACTAGATAACATGCCCAAGGTCATACAGTTAATAAGTGGCAGAACCAGGGTTCAAAACCAGTCCAGAGGCTATGCTCTTAACCACTATACAATGGTCCCATATTGTAGTTAATCAGGTATTTTTCCATATAACACAATAAAAGCATTGAACTGGGATTTTCCTATATTTGAGAAAACAGTATGGAAATAACAGATGGAGGTATAGAAGTTTTTGATAAGCTAGGCATGTTGGCTCATG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10311:HG4_Ill_Krunchall_20475:HG4_10X_allpass_2748:HG2_PB_pbsv_14909:HG4_PB_pbsv_14851:HG3_PB_pbsv_14561:HG4_Ill_MetaSV_1564:HG4_Ill_manta_3491:HG4_Ill_GATKHCSBGrefine_10246:HG3_Ill_manta_3343:HG3_Ill_MetaSV_1607:HG3_Ill_GATKHCSBGrefine_9791:HG3_10X_allpass_2870:HG2_Ill_manta_4094:HG2_Ill_SpiralSDKrefine_5050:HG2_Ill_MetaSV_1491:HG2_Ill_GATKHCSBGrefine_9901:HG2_10X_allpass_2350:HG2_Ill_tnscope_1638:HG4_PB_SVrefine2Falcon1Dovetail_9073:HG3_PB_SVrefine2Falcon1Dovetail_9037:HG3_Ill_SVrefine2DISCOVARDovetail_10656:HG2_PB_SVrefine2PBcRplusDovetail_3281:HG2_PB_SVrefine2PB10Xhap12_10772:HG2_PB_SVrefine2Falcon2Bionano_7389:HG2_PB_SVrefine2Falcon1plusDovetail_3520:HG2_Ill_SVrefine2DISCOVARplusDovetail_3884;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_2350:HG2_Ill_GATKHCSBGrefine_9901:HG2_Ill_MetaSV_1491:HG2_Ill_SpiralSDKrefine_5050:HG2_Ill_manta_4094:HG3_10X_allpass_2870:HG3_Ill_GATKHCSBGrefine_9791:HG3_Ill_MetaSV_1607:HG3_Ill_manta_3343:HG4_Ill_GATKHCSBGrefine_10246:HG4_Ill_manta_3491;NumExactMatchSVs=11;ClusterMaxShiftDist=0.134266;ClusterMaxSizeDiff=0.134266;ClusterMaxEditDist=0.134266;PBcalls=9;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-700;DistBack=48423;DistForward=-503;DistMin=-503;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=238;REFWIDENED=14:68603023-68603960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1137.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:85:./.:0:11:0:0:1/1:0:18:0:9:1/1:0:50:./.:2:18:.:.:.
chr14	68995379	HG3_PB_SVrefine2Falcon1Dovetail_9039	TAATTATTTACCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2130:HG4_PB_HySA_21718:HG3_PB_HySA_22445:HG2_Ill_Spiral_984:HG4_PB_pbsv_14852:HG2_PB_HySA_27156:HG4_PB_SVrefine2PBcRDovetail_7415:HG4_PB_SVrefine2Falcon1Dovetail_9074:HG4_Ill_svaba_18504:HG4_Ill_scalpel_13688:HG4_Ill_manta_3492:HG4_Ill_SVrefine2DISCOVARDovetail_10508:HG4_Ill_Krunchall_20478:HG4_Ill_GATKHC_23654:HG4_Ill_GATKHCSBGrefine_10247:HG4_Ill_250bpfermikitraw_19534:HG4_Ill_150bpfermikitraw_18818:HG4_CG_vcfBeta_9411:HG4_10X_allpass_2749:HG3_PB_pbsv_14563:HG3_PB_SVrefine2Falcon1Dovetail_9039:HG3_Ill_svaba_18657:HG3_Ill_scalpel_14284:HG3_Ill_manta_3344:HG3_Ill_SVrefine2DISCOVARDovetail_10658:HG3_Ill_Krunchall_19754:HG3_Ill_GATKHC_23571:HG3_Ill_GATKHCSBGrefine_9792:HG3_Ill_250bpfermikitraw_19239:HG3_Ill_150bpfermikitraw_18716:HG3_CG_vcfBeta_7955:HG3_10X_allpass_2871:HG2_PB_pbsv_14911:HG2_PB_SVrefine2PBcRplusDovetail_3282:HG2_PB_SVrefine2PB10Xhap12_10774:HG2_PB_SVrefine2Falcon2Bionano_7390:HG2_PB_SVrefine2Falcon1plusDovetail_3522:HG2_Ill_svaba_18497:HG2_Ill_manta_4095:HG2_Ill_SpiralSDKrefine_5052:HG2_Ill_SVrefine2DISCOVARplusDovetail_3887:HG2_Ill_Krunchall_20171:HG2_Ill_GATKHC_23715:HG2_Ill_GATKHCSBGrefine_9902:HG2_Ill_250bpfermikitraw_19826:HG2_Ill_150bpfermikitraw_18694:HG2_CG_vcfBeta_8360:HG2_10X_SVrefine210Xhap12_10313;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10313:HG2_CG_vcfBeta_8360:HG2_Ill_150bpfermikitraw_18694:HG2_Ill_250bpfermikitraw_19826:HG2_Ill_GATKHCSBGrefine_9902:HG2_Ill_GATKHC_23715:HG2_Ill_Krunchall_20171:HG2_Ill_SVrefine2DISCOVARplusDovetail_3887:HG2_Ill_SpiralSDKrefine_5052:HG2_Ill_manta_4095:HG2_Ill_svaba_18497:HG2_PB_SVrefine2Falcon1plusDovetail_3522:HG2_PB_SVrefine2Falcon2Bionano_7390:HG2_PB_SVrefine2PB10Xhap12_10774:HG2_PB_SVrefine2PBcRplusDovetail_3282:HG2_PB_pbsv_14911:HG3_10X_allpass_2871:HG3_CG_vcfBeta_7955:HG3_Ill_150bpfermikitraw_18716:HG3_Ill_250bpfermikitraw_19239:HG3_Ill_GATKHCSBGrefine_9792:HG3_Ill_GATKHC_23571:HG3_Ill_Krunchall_19754:HG3_Ill_SVrefine2DISCOVARDovetail_10658:HG3_Ill_manta_3344:HG3_Ill_scalpel_14284:HG3_Ill_svaba_18657:HG3_PB_SVrefine2Falcon1Dovetail_9039:HG3_PB_pbsv_14563:HG4_10X_allpass_2749:HG4_CG_vcfBeta_9411:HG4_Ill_150bpfermikitraw_18818:HG4_Ill_250bpfermikitraw_19534:HG4_Ill_GATKHCSBGrefine_10247:HG4_Ill_GATKHC_23654:HG4_Ill_Krunchall_20478:HG4_Ill_SVrefine2DISCOVARDovetail_10508:HG4_Ill_manta_3492:HG4_Ill_scalpel_13688:HG4_Ill_svaba_18504:HG4_PB_SVrefine2Falcon1Dovetail_9074:HG4_PB_SVrefine2PBcRDovetail_7415;NumExactMatchSVs=42;ClusterMaxShiftDist=0.0397351;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.0397351;PBcalls=13;Illcalls=29;TenXcalls=3;CGcalls=3;PBexactcalls=9;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=3;HG2count=19;HG3count=14;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-74;DistBack=71792;DistForward=-60;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=14:68995380-68995468;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1138.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:1:16:0:27:1/1:0:18:0:24:1/1:0:67:./.:.:.:.:.:.
chr14	70690052	HG2_PB_assemblyticsfalcon_8111	TGAAATTCAGGGACCCAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_27168:HG3_Ill_Krunchall_19761:HG4_PB_assemblyticsfalcon_8008:HG3_PB_assemblyticsfalcon_8120:HG2_Ill_Krunchall_20181:HG3_PB_pbsv_14570:HG3_Ill_MetaSV_1608:HG4_PB_SVrefine2Falcon1Dovetail_9079:HG3_PB_SVrefine2Falcon1Dovetail_9044:HG3_Ill_svaba_18660:HG3_Ill_scalpel_14294:HG3_Ill_manta_3347:HG3_Ill_SVrefine2DISCOVARDovetail_10670:HG3_Ill_GATKHCSBGrefine_9795:HG3_Ill_250bpfermikitraw_19244:HG3_Ill_150bpfermikitraw_18723:HG3_10X_allpass_2872:HG2_PB_pbsv_14918:HG2_PB_assemblyticsfalcon_8111:HG2_PB_SVrefine2PB10Xhap12_10779:HG2_PB_SVrefine2Falcon2Bionano_7396:HG2_PB_SVrefine2Falcon1plusDovetail_3526:HG2_Ill_svaba_18505:HG2_Ill_scalpel_14052:HG2_Ill_manta_4097:HG2_Ill_SVrefine2DISCOVARplusDovetail_3893:HG2_Ill_MetaSV_1494:HG2_Ill_GATKHCSBGrefine_9905:HG2_10X_allpass_2351:HG2_10X_SVrefine210Xhap12_10320:HG2_Ill_breakscan11_2131;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10320:HG2_10X_allpass_2351:HG2_Ill_GATKHCSBGrefine_9905:HG2_Ill_MetaSV_1494:HG2_Ill_SVrefine2DISCOVARplusDovetail_3893:HG2_Ill_manta_4097:HG2_Ill_scalpel_14052:HG2_Ill_svaba_18505:HG2_PB_SVrefine2Falcon1plusDovetail_3526:HG2_PB_SVrefine2Falcon2Bionano_7396:HG2_PB_SVrefine2PB10Xhap12_10779:HG2_PB_assemblyticsfalcon_8111:HG2_PB_pbsv_14918:HG3_10X_allpass_2872:HG3_Ill_150bpfermikitraw_18723:HG3_Ill_250bpfermikitraw_19244:HG3_Ill_GATKHCSBGrefine_9795:HG3_Ill_SVrefine2DISCOVARDovetail_10670:HG3_Ill_manta_3347:HG3_Ill_scalpel_14294:HG3_Ill_svaba_18660:HG3_PB_SVrefine2Falcon1Dovetail_9044:HG4_PB_SVrefine2Falcon1Dovetail_9079;NumExactMatchSVs=23;ClusterMaxShiftDist=0.248021;ClusterMaxSizeDiff=0.248021;ClusterMaxEditDist=0.248021;PBcalls=11;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-188;DistBack=31273;DistForward=-173;DistMin=-173;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=14:70690053-70690256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1139.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:30:0|1:28:1:4:30:0|1:15:0:0:17:0/1:13:31:./.:.:.:.:.:.
chr14	71078598	HG2_Ill_manta_4099	ATATATGTGTGTGTGTATATATATATACACATATATATGTATATATGTGTGTGTGTGTATATATATACACATATATATGTATATATGTGTATGTGTATATATACACACATATATATGTATATATATGTATATGTG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_14924:HG2_Ill_SpiralSDKrefine_5062:HG4_Ill_SVrefine2DISCOVARDovetail_10517:HG2_Ill_SVrefine2DISCOVARplusDovetail_3897:HG2_10X_SVrefine210Xhap12_10322:HG2_PB_SVrefine2PB10Xhap12_10783:HG4_Ill_GATKHCSBGrefine_10257:HG2_Ill_GATKHCSBGrefine_9911:HG4_PB_SVrefine2PBcRDovetail_7420:HG2_Ill_Krunchall_20191:HG4_PB_pbsv_14863:HG2_PB_assemblyticsPBcR_7831:HG2_PB_SVrefine2PBcRplusDovetail_3286:HG2_PB_SVrefine2PB10Xhap12_10782:HG2_Ill_manta_4099;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_manta_4099:HG2_PB_SVrefine2PB10Xhap12_10782:HG2_PB_SVrefine2PBcRplusDovetail_3286:HG2_PB_assemblyticsPBcR_7831;NumExactMatchSVs=4;ClusterMaxShiftDist=0.254826;ClusterMaxSizeDiff=0.254826;ClusterMaxEditDist=0.27027;PBcalls=7;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-134;DistBack=4408;DistForward=-113;DistMin=-113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=14:71078595-71078754;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1140.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:31:0|1:42:0:2:29:1|0:0:18:44:1:0/1:36:29:./.:.:.:.:.:.
chr14	71320960	HG4_Ill_manta_3495	TCACCCTGAATTATTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGTTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2132:HG3_PB_assemblyticsfalcon_8131:HG2_PB_assemblyticsPBcR_7836:HG4_Ill_Krunchall_20503:HG3_Ill_Krunchall_19775:HG4_PB_assemblyticsfalcon_8023:HG2_PB_assemblyticsfalcon_8122:HG3_Ill_Spiral_15430:HG2_PB_HySA_27180:HG4_PB_pbsv_14866:HG2_PB_pbsv_14928:HG4_Ill_MetaSV_1565:HG3_Ill_MetaSV_1610:HG2_Ill_tnscope_1639:HG2_Ill_MetaSV_1495:HG4_PB_SVrefine2PBcRDovetail_7422:HG4_PB_SVrefine2Falcon1Dovetail_9084:HG4_Ill_manta_3495:HG4_Ill_SVrefine2DISCOVARDovetail_10521:HG4_Ill_GATKHCSBGrefine_10261:HG4_10X_allpass_2753:HG3_PB_pbsv_14577:HG3_PB_SVrefine2Falcon1Dovetail_9049:HG3_Ill_manta_3350:HG3_Ill_SVrefine2DISCOVARDovetail_10675:HG3_Ill_GATKHCSBGrefine_9800:HG3_10X_allpass_2874:HG2_PB_SVrefine2PBcRplusDovetail_3289:HG2_PB_SVrefine2PB10Xhap12_10787:HG2_PB_SVrefine2Falcon2Bionano_7398:HG2_PB_SVrefine2Falcon1plusDovetail_3532:HG2_Ill_scalpel_14061:HG2_Ill_manta_4100:HG2_Ill_SVrefine2DISCOVARplusDovetail_3900:HG2_Ill_GATKHCSBGrefine_9915:HG2_10X_allpass_2354:HG2_10X_SVrefine210Xhap12_10323;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10323:HG2_10X_allpass_2354:HG2_Ill_GATKHCSBGrefine_9915:HG2_Ill_SVrefine2DISCOVARplusDovetail_3900:HG2_Ill_manta_4100:HG2_Ill_scalpel_14061:HG2_PB_SVrefine2Falcon1plusDovetail_3532:HG2_PB_SVrefine2Falcon2Bionano_7398:HG2_PB_SVrefine2PB10Xhap12_10787:HG2_PB_SVrefine2PBcRplusDovetail_3289:HG3_10X_allpass_2874:HG3_Ill_GATKHCSBGrefine_9800:HG3_Ill_SVrefine2DISCOVARDovetail_10675:HG3_Ill_manta_3350:HG3_PB_SVrefine2Falcon1Dovetail_9049:HG3_PB_pbsv_14577:HG4_10X_allpass_2753:HG4_Ill_GATKHCSBGrefine_10261:HG4_Ill_SVrefine2DISCOVARDovetail_10521:HG4_Ill_manta_3495:HG4_PB_SVrefine2Falcon1Dovetail_9084:HG4_PB_SVrefine2PBcRDovetail_7422;NumExactMatchSVs=22;ClusterMaxShiftDist=0.122592;ClusterMaxSizeDiff=0.122592;ClusterMaxEditDist=0.122592;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-293;DistBack=7036;DistForward=7547;DistMin=7036;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=14:71320961-71321271;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1141.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:34:0:23:1/1:0:30:0:27:1/1:0:57:./.:.:.:.:.:.
chr14	71437827	HG2_Ill_manta_4102	ATATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGACTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10324:HG4_10X_allpass_2754:HG4_PB_assemblyticsfalcon_8024:HG2_PB_assemblyticsfalcon_8124:HG3_PB_assemblyticsfalcon_8133:HG2_PB_assemblyticsPBcR_7837:HG4_Ill_Krunchall_20507:HG3_Ill_Krunchall_19777:HG4_Ill_Spiral_1152:HG3_Ill_Spiral_15432:HG2_PB_HySA_27183:HG2_Ill_Spiral_986:HG4_PB_pbsv_14868:HG3_PB_pbsv_14579:HG2_Ill_breakscan11_2133:HG4_Ill_MetaSV_1566:HG3_Ill_MetaSV_1611:HG2_Ill_tnscope_1640:HG2_Ill_MetaSV_1496:HG4_PB_SVrefine2PBcRDovetail_7423:HG4_PB_SVrefine2Falcon1Dovetail_9085:HG4_Ill_SVrefine2DISCOVARDovetail_10523:HG4_Ill_GATKHCSBGrefine_10263:HG3_PB_SVrefine2Falcon1Dovetail_9050:HG3_PB_HySA_22468:HG3_Ill_scalpel_14302:HG3_Ill_manta_3351:HG3_Ill_SVrefine2DISCOVARDovetail_10677:HG3_Ill_GATKHCSBGrefine_9801:HG3_10X_allpass_2875:HG2_PB_pbsv_14930:HG2_PB_SVrefine2PBcRplusDovetail_3290:HG2_PB_SVrefine2PB10Xhap12_10788:HG2_PB_SVrefine2Falcon2Bionano_7400:HG2_PB_SVrefine2Falcon1plusDovetail_3533:HG2_Ill_manta_4102:HG2_Ill_SVrefine2DISCOVARplusDovetail_3903:HG2_Ill_GATKHCSBGrefine_9917;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10324:HG4_PB_SVrefine2PBcRDovetail_7423:HG4_PB_SVrefine2Falcon1Dovetail_9085:HG4_Ill_SVrefine2DISCOVARDovetail_10523:HG4_Ill_GATKHCSBGrefine_10263:HG3_PB_SVrefine2Falcon1Dovetail_9050:HG3_PB_HySA_22468:HG3_Ill_scalpel_14302:HG3_Ill_manta_3351:HG3_Ill_SVrefine2DISCOVARDovetail_10677:HG3_Ill_GATKHCSBGrefine_9801:HG3_10X_allpass_2875:HG2_PB_pbsv_14930:HG2_PB_SVrefine2PBcRplusDovetail_3290:HG2_PB_SVrefine2PB10Xhap12_10788:HG2_PB_SVrefine2Falcon2Bionano_7400:HG2_PB_SVrefine2Falcon1plusDovetail_3533:HG2_Ill_manta_4102:HG2_Ill_SVrefine2DISCOVARplusDovetail_3903:HG2_Ill_GATKHCSBGrefine_9917;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0515152;ClusterMaxSizeDiff=0.0515152;ClusterMaxEditDist=0.0515152;PBcalls=16;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=17473;DistForward=21778;DistMin=17473;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=14:71437828-71438169;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1142.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:67:1/1:2:32:1:29:1/1:1:23:0:23:1/1:0:37:./.:1:15:.:.:.
chr14	73982373	HG2_Ill_SVrefine2DISCOVARplusDovetail_3916	CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTCCTGTGAGACTCCAGGGCAGTTTAGCAAAGATGCCCATACAATGCATCTCCTCCAAATGGTCCCCACCAGCTTGGACGTGCTGGGGGACTCAGCCACTCTGCTGAGGCCTCCCTCCTTTCTGGGGTAGGGTGTGTGCAACTAGGAGCTGTGGAACCACCTCTGACAGGCCAGCTCACACTTTGCCATGTGACGCTCCCCGACTTCTCTCAGGCGATTTGAAATCCCTCCTGAAGAGATGAGAAGTAGCTGAATTAACCCCATTTCTCCTATATCCCTCTGCTCAAGGAGTTAAAATGGATTTGCGGTGAGCAAGTCTTAGATCTCTGATATTTAACCTCATAGGAATAAAAAATACAACTGCCAACTTTTACTTTGGTTCCAGTCCTTTGGGTTATAGCTGGATAGAAACACATCCACTAGCCATCTTCCACATCAACAGTCA	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3916:HG2_PB_HySA_27205:HG4_PB_pbsv_14878:HG4_PB_pbsv_14877:HG2_PB_pbsv_14943:HG4_PB_SVrefine2PBcRDovetail_7427:HG4_PB_HySA_21757:HG4_PB_SVrefine2Falcon1Dovetail_9091:HG4_Ill_SVrefine2DISCOVARDovetail_10536:HG2_PB_SVrefine2PBcRplusDovetail_3294:HG2_PB_SVrefine2PB10Xhap12_10795:HG2_PB_SVrefine2Falcon2Bionano_7408;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3916:HG4_Ill_SVrefine2DISCOVARDovetail_10536:HG2_PB_SVrefine2PBcRplusDovetail_3294:HG2_PB_SVrefine2PB10Xhap12_10795:HG2_PB_SVrefine2Falcon2Bionano_7408;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0147524;ClusterMaxSizeDiff=0.0147524;ClusterMaxEditDist=0.0169492;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-476;DistBack=-837;DistForward=-1;DistMin=-837;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=481;REFWIDENED=14:73982374-73983330;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1143.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:20:./.:21:7:9:8:./.:0:3:18:1:./.:4:2:0/1:8:5:.:.:.
chr14	74288218	HG2_PB_SVrefine2Falcon1plusDovetail_3542	TTTTAATAGAGATGGGGTCTCACCATGTTGTCCAGGCTGGTCTTGAACTCCGGGGCTTAAACGATCCACCCACCTCAGCTTCCCAAAGTGCCAGGATTATAGGCATGAGCCACCACATCCAGCCTGGGTTCTTTCACTTAGCCACTTAGCATAAAGTTTTCTTTCTTTC	T	10	PASS	ClusterIDs=HG3_PB_pbsv_14590:HG3_PB_HySA_22488:HG2_PB_assemblyticsfalcon_8152:HG2_PB_pbsv_14947:HG2_PB_SVrefine2Falcon2Bionano_7411:HG2_PB_SVrefine2Falcon1plusDovetail_3542;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3542:HG2_PB_SVrefine2Falcon2Bionano_7411;NumExactMatchSVs=2;ClusterMaxShiftDist=0.042042;ClusterMaxSizeDiff=0.042042;ClusterMaxEditDist=0.048048;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-168;DistBack=3773;DistForward=3325;DistMin=3325;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=14:74288219-74288389;PctSeqSimilarity=0.991;PctSizeSimilarity=0.9821;PctRecOverlap=0.9822;SizeDiff=3;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1144.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:28:1|0:1:27:21:1:./.:45:2:1:5:0/0:22:1:./.:.:.:.:.:.
chr14	76813773	HG4_Ill_manta_3499	TGTGTCACACACACACACCGAGAAAACTAAATGAGAATTAAATGGGTAACACTTAGCACAGAATGGGGGGCCCAATACTCTAAGCTACTATTATGGACGCTAAAGCCAGTGCCTGCAACAGTGCATGTCATAGACACTGAAATAGCTCACTTAATCTGCCCAACAACTCTTCCAGGTAGGTATCTCTTCATTTTGCATATAAAGAACCCAAAGCTCAGAGGGGTTAAGTAATTTGTCCAAAGTTGTACAGCTAGTAAGTGATGGAGCCTGGACTCCAATCCAGTTCTGCCTGACCCCAAGGTCCAGAGCATCTCTATTACACTCACCTTGAGGTCAAGGACTCTGAGCAAACAGTTCAGGAGACTCCTCACCCCACTGAGTCACCAACCAGTCAGATCACCAATGGGCAGCAGCCACTTCCTTTCTCCTACCTGAG	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9063:HG2_PB_assemblyticsPBcR_7874:HG3_PB_pbsv_14597:HG4_PB_pbsv_14889:HG2_PB_SVrefine2PBcRplusDovetail_3300:HG2_PB_SVrefine2PB10Xhap12_10805:HG2_PB_pbsv_14956:HG4_Ill_MetaSV_1574:HG2_Ill_tnscope_1641:HG2_Ill_MetaSV_1503:HG4_PB_assemblyticsfalcon_8063:HG4_PB_SVrefine2Falcon1Dovetail_9098:HG4_Ill_manta_3499:HG4_Ill_GATKHCSBGrefine_10275:HG4_10X_allpass_2756:HG3_Ill_manta_3355:HG3_Ill_GATKHCSBGrefine_9816:HG3_10X_allpass_2876:HG2_PB_assemblyticsfalcon_8173:HG2_PB_SVrefine2Falcon1plusDovetail_3550:HG2_Ill_manta_4104:HG2_Ill_GATKHCSBGrefine_9930:HG2_10X_allpass_2355:HG2_10X_SVrefine210Xhap12_10355:HG4_Ill_Krunchall_20546:HG3_Ill_Krunchall_19828:HG3_PB_assemblyticsfalcon_8167;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10355:HG2_10X_allpass_2355:HG2_Ill_GATKHCSBGrefine_9930:HG2_Ill_manta_4104:HG2_PB_SVrefine2Falcon1plusDovetail_3550:HG2_PB_assemblyticsfalcon_8173:HG3_10X_allpass_2876:HG3_Ill_GATKHCSBGrefine_9816:HG3_Ill_manta_3355:HG4_10X_allpass_2756:HG4_Ill_GATKHCSBGrefine_10275:HG4_Ill_manta_3499:HG4_PB_SVrefine2Falcon1Dovetail_9098:HG4_PB_assemblyticsfalcon_8063;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0322953;ClusterMaxSizeDiff=0.0322953;ClusterMaxEditDist=0.0322953;PBcalls=12;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-435;DistBack=-536;DistForward=-433;DistMin=-536;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=14:76813774-76814209;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1145.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:26:0|1:34:0:0:32:0|1:91:0:0:29:0/1:62:22:0/1:41:8:.:.:.
chr14	77193681	HG2_Ill_250bpfermikitraw_19895	TGCCTAGCCTCTGTGCTAGCCTCTAAGTGCTTTTTAATACACTAATTAATAATTATAAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10358:HG4_PB_HySA_21783:HG2_PB_HySA_27230:HG4_PB_pbsv_14891:HG3_PB_pbsv_14599:HG2_PB_pbsv_14958:HG3_PB_HySA_22517:HG4_PB_assemblyticsfalcon_8068:HG4_PB_SVrefine2PBcRDovetail_7433:HG4_Ill_svaba_18576:HG4_Ill_scalpel_13727:HG4_Ill_manta_3500:HG4_Ill_SVrefine2DISCOVARDovetail_10554:HG4_Ill_Krunchall_20552:HG4_Ill_GATKHCSBGrefine_10278:HG4_Ill_250bpfermikitraw_19604:HG4_Ill_150bpfermikitraw_18886:HG3_PB_assemblyticsfalcon_8173:HG3_Ill_svaba_18725:HG3_Ill_scalpel_14341:HG3_Ill_SVrefine2DISCOVARDovetail_10702:HG3_Ill_Krunchall_19833:HG3_Ill_GATKHCSBGrefine_9818:HG3_Ill_250bpfermikitraw_19309:HG3_Ill_150bpfermikitraw_18782:HG2_PB_SVrefine2PBcRplusDovetail_3301:HG2_PB_SVrefine2PB10Xhap12_10806:HG2_PB_SVrefine2Falcon2Bionano_7417:HG2_PB_SVrefine2Falcon1plusDovetail_3551:HG2_Ill_svaba_18573:HG2_Ill_scalpel_14092:HG2_Ill_manta_4105:HG2_Ill_SpiralSDKrefine_5100:HG2_Ill_SVrefine2DISCOVARplusDovetail_3933:HG2_Ill_GATKHCSBGrefine_9933:HG2_Ill_250bpfermikitraw_19895:HG2_Ill_150bpfermikitraw_18760;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10358:HG4_PB_assemblyticsfalcon_8068:HG4_PB_SVrefine2PBcRDovetail_7433:HG4_Ill_svaba_18576:HG4_Ill_scalpel_13727:HG4_Ill_manta_3500:HG4_Ill_SVrefine2DISCOVARDovetail_10554:HG4_Ill_Krunchall_20552:HG4_Ill_GATKHCSBGrefine_10278:HG4_Ill_250bpfermikitraw_19604:HG4_Ill_150bpfermikitraw_18886:HG3_PB_assemblyticsfalcon_8173:HG3_Ill_svaba_18725:HG3_Ill_scalpel_14341:HG3_Ill_SVrefine2DISCOVARDovetail_10702:HG3_Ill_Krunchall_19833:HG3_Ill_GATKHCSBGrefine_9818:HG3_Ill_250bpfermikitraw_19309:HG3_Ill_150bpfermikitraw_18782:HG2_PB_SVrefine2PBcRplusDovetail_3301:HG2_PB_SVrefine2PB10Xhap12_10806:HG2_PB_SVrefine2Falcon2Bionano_7417:HG2_PB_SVrefine2Falcon1plusDovetail_3551:HG2_Ill_svaba_18573:HG2_Ill_scalpel_14092:HG2_Ill_manta_4105:HG2_Ill_SpiralSDKrefine_5100:HG2_Ill_SVrefine2DISCOVARplusDovetail_3933:HG2_Ill_GATKHCSBGrefine_9933:HG2_Ill_250bpfermikitraw_19895:HG2_Ill_150bpfermikitraw_18760;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.0521739;PBcalls=13;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-58;DistBack=18394;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=58;REFWIDENED=14:77193682-77193797;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1146.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:48:1/1:1:27:5:22:1/1:0:18:0:18:1/1:0:54:./.:.:.:.:.:.
chr14	77736011	HG2_Ill_150bpfermikitraw_18768	TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_14964:HG2_PB_HySA_27238:HG4_PB_HySA_21789:HG4_PB_pbsv_14897:HG2_PB_assemblyticsfalcon_8191:HG4_PB_SVrefine2Falcon1Dovetail_9105:HG4_Ill_Krunchall_20557:HG4_Ill_GATKHCSBGrefine_10279:HG4_Ill_250bpfermikitraw_19608:HG4_Ill_150bpfermikitraw_18891:HG3_PB_assemblyticsfalcon_8183:HG3_Ill_250bpfermikitraw_19312:HG2_PB_assemblyticsPBcR_7888:HG2_Ill_GATKHC_23807:HG2_Ill_GATKHCSBGrefine_9935:HG2_Ill_250bpfermikitraw_19902:HG2_Ill_150bpfermikitraw_18768:HG3_PB_pbsv_14606;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18768:HG2_Ill_250bpfermikitraw_19902:HG2_Ill_GATKHCSBGrefine_9935:HG2_Ill_GATKHC_23807:HG2_PB_assemblyticsPBcR_7888:HG3_Ill_250bpfermikitraw_19312:HG3_PB_assemblyticsfalcon_8183:HG4_Ill_150bpfermikitraw_18891:HG4_Ill_250bpfermikitraw_19608:HG4_Ill_GATKHCSBGrefine_10279:HG4_Ill_Krunchall_20557;NumExactMatchSVs=11;ClusterMaxShiftDist=0.237762;ClusterMaxSizeDiff=0.237762;ClusterMaxEditDist=0.237762;PBcalls=9;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-65;DistBack=32687;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=50;REFWIDENED=14:77736010-77736127;PctSeqSimilarity=0.9065;PctSizeSimilarity=0.8784;PctRecOverlap=0.0267;SizeDiff=-9;StartDistance=-64;EndDistance=-73;GTMatch=0;TruScore=60;MatchId=1147.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:./.:0:3:0:4:./.:0:6:0:3:1/1:0:15:./.:.:.:.:.:.
chr14	78249852	HG4_Ill_scalpel_13736	TAAAAATTTAGTGATTATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGGCAACAGGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGGGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_14609:HG4_PB_pbsv_14899:HG3_PB_HySA_22524:HG2_PB_pbsv_14966:HG4_PB_HySA_21797:HG2_Ill_tnscope_1642:HG4_PB_SVrefine2PBcRDovetail_7438:HG4_PB_SVrefine2Falcon1Dovetail_9107:HG4_Ill_scalpel_13736:HG4_Ill_manta_3502:HG4_10X_allpass_2757:HG3_PB_SVrefine2Falcon1Dovetail_9069:HG3_Ill_scalpel_14348:HG3_Ill_SVrefine2DISCOVARDovetail_10707:HG3_Ill_GATKHCSBGrefine_9822:HG3_10X_allpass_2878:HG2_PB_SVrefine2PB10Xhap12_10810:HG2_PB_SVrefine2Falcon1plusDovetail_3555:HG2_Ill_breakscan11_2137:HG2_Ill_GATKHCSBGrefine_9937:HG2_10X_allpass_2356:HG2_10X_SVrefine210Xhap12_10361;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10361:HG2_10X_allpass_2356:HG2_Ill_GATKHCSBGrefine_9937:HG2_Ill_breakscan11_2137:HG2_PB_SVrefine2Falcon1plusDovetail_3555:HG2_PB_SVrefine2PB10Xhap12_10810:HG3_10X_allpass_2878:HG3_Ill_GATKHCSBGrefine_9822:HG3_Ill_SVrefine2DISCOVARDovetail_10707:HG3_Ill_scalpel_14348:HG3_PB_SVrefine2Falcon1Dovetail_9069:HG4_10X_allpass_2757:HG4_Ill_manta_3502:HG4_Ill_scalpel_13736:HG4_PB_SVrefine2Falcon1Dovetail_9107:HG4_PB_SVrefine2PBcRDovetail_7438;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0058997;ClusterMaxSizeDiff=0.0058997;ClusterMaxEditDist=0.00591716;PBcalls=10;Illcalls=8;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=4;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-338;DistBack=-338;DistForward=-327;DistMin=-338;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=315;REFWIDENED=14:78249853-78250505;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1148.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:0|1:21:3:2:28:0|1:27:2:0:15:0/1:12:11:0/1:15:7:.:.:.
chr14	78828233	HG4_10X_allpass_2758	TAAGAAGAAACTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_14610:HG4_PB_assemblyticsfalcon_8088:HG3_PB_assemblyticsfalcon_8194:HG2_PB_assemblyticsfalcon_8203:HG4_Ill_Krunchall_20567:HG3_Ill_Krunchall_19849:HG2_Ill_Krunchall_20262:HG2_PB_assemblyticsPBcR_7898:HG2_PB_pbsv_14968:HG2_PB_HySA_27250:HG4_Ill_MetaSV_1578:HG3_Ill_MetaSV_1626:HG2_Ill_MetaSV_1505:HG4_PB_pbsv_14902:HG4_PB_SVrefine2PBcRDovetail_7439:HG4_PB_SVrefine2Falcon1Dovetail_9108:HG4_Ill_SVrefine2DISCOVARDovetail_10560:HG4_Ill_GATKHCSBGrefine_10283:HG4_10X_allpass_2758:HG3_PB_SVrefine2Falcon1Dovetail_9070:HG3_Ill_SVrefine2DISCOVARDovetail_10710:HG3_Ill_GATKHCSBGrefine_9825:HG3_10X_allpass_2879:HG2_PB_SVrefine2PBcRplusDovetail_3306:HG2_PB_SVrefine2PB10Xhap12_10812:HG2_PB_SVrefine2Falcon2Bionano_7421:HG2_PB_SVrefine2Falcon1plusDovetail_3556:HG2_Ill_manta_4107:HG2_Ill_breakscan11_2138:HG2_Ill_SpiralSDKrefine_5110:HG2_Ill_SVrefine2DISCOVARplusDovetail_3940:HG2_Ill_GATKHCSBGrefine_9940:HG2_10X_allpass_2357:HG2_10X_SVrefine210Xhap12_10363:HG2_Ill_tnscope_1643;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10363:HG2_10X_allpass_2357:HG2_Ill_GATKHCSBGrefine_9940:HG2_Ill_SVrefine2DISCOVARplusDovetail_3940:HG2_Ill_SpiralSDKrefine_5110:HG2_Ill_breakscan11_2138:HG2_Ill_manta_4107:HG2_PB_SVrefine2Falcon1plusDovetail_3556:HG2_PB_SVrefine2Falcon2Bionano_7421:HG2_PB_SVrefine2PB10Xhap12_10812:HG2_PB_SVrefine2PBcRplusDovetail_3306:HG3_10X_allpass_2879:HG3_Ill_GATKHCSBGrefine_9825:HG3_Ill_SVrefine2DISCOVARDovetail_10710:HG3_PB_SVrefine2Falcon1Dovetail_9070:HG4_10X_allpass_2758:HG4_Ill_GATKHCSBGrefine_10283:HG4_Ill_SVrefine2DISCOVARDovetail_10560:HG4_PB_SVrefine2Falcon1Dovetail_9108:HG4_PB_SVrefine2PBcRDovetail_7439:HG4_PB_pbsv_14902;NumExactMatchSVs=21;ClusterMaxShiftDist=0.066474;ClusterMaxSizeDiff=0.066474;ClusterMaxEditDist=0.066474;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-351;DistBack=-350;DistForward=-340;DistMin=-350;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=14:78828234-78828596;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1149.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:63:./.:0:0:0:1:1/1:0:25:0:14:1/1:0:38:0/1:2:6:.:.:.
chr14	79486462	HG2_PB_SVrefine2Falcon2Bionano_7423	TTTCCTTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_14612:HG3_PB_assemblyticsfalcon_8197:HG3_PB_HySA_22533:HG2_PB_assemblyticsfalcon_8206:HG2_PB_HySA_27253:HG2_PB_PB10Xdip_10064:HG2_PB_pbsv_14969:HG4_PB_pbsv_14904:HG2_PB_SVrefine2PB10Xhap12_10815:HG2_Ill_SVrefine2DISCOVARplusDovetail_3947:HG2_PB_SVrefine2PBcRplusDovetail_3308:HG2_PB_SVrefine2PB10Xhap12_10814:HG2_PB_SVrefine2Falcon2Bionano_7423:HG2_10X_SVrefine210Xhap12_10367;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10367:HG2_PB_SVrefine2Falcon2Bionano_7423:HG2_PB_SVrefine2PB10Xhap12_10814:HG2_PB_SVrefine2PBcRplusDovetail_3308;NumExactMatchSVs=4;ClusterMaxShiftDist=0.248366;ClusterMaxSizeDiff=0.248366;ClusterMaxEditDist=0.331034;PBcalls=12;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-70;DistBack=1821;DistForward=-66;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=14:79486461-79486537;PctSeqSimilarity=0.9545;PctSizeSimilarity=1;PctRecOverlap=0.4789;SizeDiff=0;StartDistance=-37;EndDistance=-37;GTMatch=0;TruScore=81;MatchId=1150.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:43:1/1:2:7:2:34:0/0:6:1:8:0:0/1:7:2:./.:.:.:.:.:.
chr14	79653926	HG3_Ill_svaba_18743	TAAAAATGTGTAAGCATGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_15483:HG2_PB_HySA_27256:HG4_PB_pbsv_14905:HG2_PB_pbsv_14970:HG4_PB_assemblyticsfalcon_8093:HG4_PB_SVrefine2PBcRDovetail_7441:HG4_PB_SVrefine2Falcon1Dovetail_9110:HG4_Ill_svaba_18592:HG4_Ill_scalpel_13745:HG4_Ill_manta_3503:HG4_Ill_SVrefine2DISCOVARDovetail_10567:HG4_Ill_Krunchall_20573:HG4_Ill_GATKHC_23760:HG4_Ill_GATKHCSBGrefine_10284:HG4_Ill_250bpfermikitraw_19620:HG4_10X_allpass_2759:HG3_PB_assemblyticsfalcon_8200:HG3_PB_SVrefine2Falcon1Dovetail_9072:HG3_Ill_svaba_18743:HG3_Ill_scalpel_14355:HG3_Ill_manta_3359:HG3_Ill_SVrefine2DISCOVARDovetail_10713:HG3_Ill_Krunchall_19853:HG3_Ill_GATKHC_23675:HG3_Ill_GATKHCSBGrefine_9826:HG3_Ill_250bpfermikitraw_19325:HG3_10X_allpass_2880:HG2_PB_SVrefine2PBcRplusDovetail_3309:HG2_PB_SVrefine2PB10Xhap12_10816:HG2_PB_SVrefine2Falcon2Bionano_7424:HG2_PB_SVrefine2Falcon1plusDovetail_3558:HG2_Ill_svaba_18590:HG2_Ill_scalpel_14109:HG2_Ill_manta_4108:HG2_Ill_SVrefine2DISCOVARplusDovetail_3948:HG2_Ill_Krunchall_20266:HG2_Ill_GATKHC_23822:HG2_Ill_GATKHCSBGrefine_9941:HG2_Ill_250bpfermikitraw_19914:HG2_10X_allpass_2358:HG2_10X_SVrefine210Xhap12_10368:HG3_PB_pbsv_14613:HG2_Ill_breakscan11_2139;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10368:HG2_10X_allpass_2358:HG2_Ill_250bpfermikitraw_19914:HG2_Ill_GATKHCSBGrefine_9941:HG2_Ill_GATKHC_23822:HG2_Ill_Krunchall_20266:HG2_Ill_SVrefine2DISCOVARplusDovetail_3948:HG2_Ill_manta_4108:HG2_Ill_scalpel_14109:HG2_Ill_svaba_18590:HG2_PB_SVrefine2Falcon1plusDovetail_3558:HG2_PB_SVrefine2Falcon2Bionano_7424:HG2_PB_SVrefine2PB10Xhap12_10816:HG2_PB_SVrefine2PBcRplusDovetail_3309:HG3_10X_allpass_2880:HG3_Ill_250bpfermikitraw_19325:HG3_Ill_GATKHCSBGrefine_9826:HG3_Ill_GATKHC_23675:HG3_Ill_Krunchall_19853:HG3_Ill_SVrefine2DISCOVARDovetail_10713:HG3_Ill_manta_3359:HG3_Ill_scalpel_14355:HG3_Ill_svaba_18743:HG3_PB_SVrefine2Falcon1Dovetail_9072:HG3_PB_assemblyticsfalcon_8200:HG4_10X_allpass_2759:HG4_Ill_250bpfermikitraw_19620:HG4_Ill_GATKHCSBGrefine_10284:HG4_Ill_GATKHC_23760:HG4_Ill_Krunchall_20573:HG4_Ill_SVrefine2DISCOVARDovetail_10567:HG4_Ill_manta_3503:HG4_Ill_scalpel_13745:HG4_Ill_svaba_18592:HG4_PB_SVrefine2Falcon1Dovetail_9110:HG4_PB_SVrefine2PBcRDovetail_7441:HG4_PB_assemblyticsfalcon_8093;NumExactMatchSVs=37;ClusterMaxShiftDist=0.02;ClusterMaxSizeDiff=0.02;ClusterMaxEditDist=0.020202;PBcalls=13;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=24;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-99;DistBack=2479;DistForward=-85;DistMin=-85;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=14:79653927-79654041;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1151.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:74:1/1:2:35:0:35:1/1:0:8:0:16:1/1:0:41:./.:.:.:.:.:.
chr14	80106288	HG2_PB_SVrefine2PB10Xhap12_10819	GTGGTTTCAGTATATGCAGCAAGTGGACATTTAGAATGGCACAGTTATCCATATAGGAATATTGTTGAGGCAGTTCATCTTGTTGTCCCTATAGTGTAATTCTTTGGAGTAGAAAGCAAAGAGCAATAATTTGTCCAATAAATGAAATAAGGAAATGAAGAGAAAATTTACATAAGCCAGGGAGGCCAACTTAATTTTCTAAAGTAGTGAATTGACTTTTTTTCCTTGGATTTTGAAATAAATGGCAATAAATCCAGTTGTGGGGTAGAGTTCTTTGCTTTCAGTGATAGCTTAGGAACATTCTGCAGATTGTTAGGATTGCTTGTATGTGGTTTTAAATGAATGAAGCTGTTTCTATACAGCTATTTTCAGAAATTCTATGATCTAAATGTTTTAGATTCAGGCAAATAAATACATATCTATATTGGGAGATAAGGTTTTTGCTCAAACAAGCAATGAGTAGTTTTCCCATTCCTAATGTCCACACTATCTTGACCACTACCAAGAAACACTTTTTGCACCATGATGTGCAAACCATGTATTTCTTATCATCTTGATGCTGTTGCTCATTTTGCTTAAGTTTTAAAGATTTGGCCTTTCTCTTTTTATGTTGATTACCAAGAGTGTCTTTGCAAAGTCCTTTATGCAGTACTCAAAGTATGTCCATGCCATTTAGCTCCTATAAAGAAAACAAGTTTTTAGCCTTCCTAGGAAATTAAGTTTCCTACAAAATATATGCTCTTCAAAAGCTCTCTCGGCTTCATTTCAAGCATGGAAAGCTTGCTGGTGACTTTTGTTCTACTTGATACGGCATATCCATTCTTGAGTGAGGCTGAGTACAAACAGCATTATCCTGATGTAAAGGAAACAAAAATAATTCTAACCACTAATTAACTAACAGCAAAGAGACTGATAGTCTTAAATGGAAAGAATACTTCCATGGTCTAGTTTCTAGAGAACACTACCAGGGGCTTGAAGGTAAGTAGCCTCTACTGGAGGCTAAGGGAAGCTAAACACTTAAGTTTTCTTCTATATTATCAGTTGCTGTTTAGAATAAATTATAATCTCCACGTTTTTTTTTGAGACAGAGTCTCGCTCTGTCTCCCAGGCTGGAGTGCAGTGGTACAATCTCGGCTCACTGTAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAACTGGGATTACAGGCGCACAGCACCTCGCCTGGCTAATTCTTCTGTATTTTTAGTAGAGATTGAGTTTCACCATGTTGGTCAGGCTAATCTGGAAATCCTGACCTCGTGATTTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCTCGGCCTCTTCTTTACTATAGAGTAAAAGTTGCATGGTCGTTTTCTTGCATTTGGGTCACAGCTTCAGAAGGTTATTACCAATCAGAAAAAGGTTTTGAGTCTTTTATTTCCTAAAACTGAGTGTATTCGTTATTGTCTAATGACACAGCATAACAAACCACTGAAATTCAGTGGCTTATCATACCAAATATTTACGCCCATGTTTACAGGCCTGCAGGTTGACTGAAATTTGGCTTGTCTCCGCTGGGCTCAGCATGTTGGCTCTCCTTTGGACTGCAGGTCAGCTAGGATTGGCTCCAGGCTGGGATTAGGTTCAGATATGCTCCATGCATGTTTTTTTCTGGGGCTCAAACTGAAGGGACAGTGTCTATCCAGGGCTTAGTCTTTCATGGTACATTTCTGCAGCACACAAAGGCTCCCTCCAAATGCAGCAATTCCTTCCTCAGCGGTAGTAGTCCAGACAGAAACAGTTTTGGTGGTTGCTTGAGTTCTCCCAGTTGTTCTCCTGTCATTTTGCAGGTCAATCTGCTTCATTATAGGAACATTCTACTGGAGAAAAAAGTCTATCATTATTCAAAATATCCCTCCTTATGCATACTTCCCACTGCTTAGATGTCTATACTCAGAAAAGTTACTATGTGGTTTTTCTTTATGGGACAATACTGCGTGATCGTGGCGTTCACATTTCTCCCTCCAAGTCCTTGCTTTTCTAGTTTCTGTAATCATTCCTCAGGTGACATAAAAGTATTTTCCGAAGTTTTGCCATTTTCATCACACAATATTGTGGACAAATTAAAGCCTATTGATGACTTTATTAAAGCAGGGTATTTACCACAAATTAGGATTCTCTGCATTTTGCCTGACTCCTGCAGAGCACAGAGACCATTCTTGTCTCCAATAGCAACACTCTTCTATTAATCAATCAAGAGCTGACATGAATGTTTTTATAGAGATTCTGTTCCACTTAGCGATCCTATTGAACCCCTGGCCATGTGGTATCCCCACAGCTCTTCTTCTGAAATCCCATTTTGACCAAGCCATCCAAATTATACACTTAGACTGTAATTGTTTCTTTTCCATAAATGAATTTACATTCATCTTAATTCACATTCGTTGAGATTTTTTCTCTGTTTCCAAGTCTCTTCACAGCATTTGTATTCTGTCATTCAATACATTTCCTCCAATACATCATATCACATTCATATGCAATATGAATGAACTTGTAACAATATCTCTCTTTTTTTTTAATTCAAGCCACTGATACAAATATTGACCAGGTAGGTTGTAAAGGACATGGTTCTGTGGCCAGCCCTGCAAGATCTCCTTATCTGTTTGTTTAGTACACCATGTATATAATGTGTAAGCCTGCCTCAGTTTTCTTCATGGTGGCCTCAGAGATATCACTGAAGACCTATCTGATGCTTTGCTGTGATTTTTATTCCCTGTTCACGCCATTCTCCTGATTTCCTGTATAGTAACTATATTCTCAAGAAGATGAGATTAGTTTGATGTGACTATTCTTTGTGAAGCTGTACTAGCTAATTGCATTTCCTCTTAGTTTCTAAAACCCAGAGGTCCCAAAGTCAAATGCTTTGCAGCCAGGCAAGTAACAAATGTCTGGGTCAGAAGCTGGGTATTATTCGTCATTTCATGAACAGAAATATATATCCTCTGAGTAGAAGACTCTGCCAGCAGAACAAAATTCTTCTGTTAGCTAATTTCACTAGCCATCATATGATTTAGCTTCTGAAGCAGCTTGCTGCTCTGTTATTCGTGTGAACTCATATCCTTTCTCATTTGGAAAGTCAAGACCACATGGGTACACCTCTTATCACAAGCTTCGTAGAGACCACAAAGATGCCACTTTAGTCCCAACTCACTAAATCTCCTCTACAATGTCTCTAAAAATTATCCAATAGTGTTTTTTAAAATATATATCAAATTATGCTATCTCACCACATCACAGTATAGCTGCTACTATTCCTCCTGTCTTCCTGTCTCAGAGGAAAAATTTGCTTATCACCTTCCACAGTTGAGTCTACCTAGGTCCTTGGCCTCCTGCCCTTTTATCTTTTCTGAGATCTCATGCCATCTGTTACCTCATCTCTATTTTATCTGTTATAATTCCTCTCCTCTGCTTCTTCCCCAGCTGCTCAGAACATACTGAAATATATGTAAGATTTTGGGTTTTTTTTCTGGTCATTTTGCTCAATGACTTCCTAATACCAACTGAAGAGAGTTTATATTTCTTAATACAACATTGAAAGCCTAACATGATTTGGCCTCAACCTACCTTTTTTTATCCAGTAAAATTCATTTCTCTCTAATGTATACTATATTCCATCCAAACTAACCCACTGATTAGACTTCATTTTTCTTTTAATTACTGCTTTTTGCTGTGCTGGTCCCACTGCTTAGAATGTTATTTCCTCAACCTTATTTCTGTTTCCTACATTTGTTGAAATCCTAGATGTCCTTCAGAACCCAGCCTCTGAGTCACCTCTTGCAGGAAGCCTTCCTTGCTTTCCCTAGCAGAACAACAATTTCTACTGAAACCCTGTTGAATTTTGTCTCCATTATTGCCTTTACCACCTTCTATGTTTTGACAGCTATTTTGACTATGTCTTATCTACCCAATTGTAAACTTAATGAATACCCACACTGTATCCTATTTATCTTTATATCTTTAGATTGCAACACAATTCTTTGCACATAGTGTGTGCCAAAAAATCTCTATTGATTGATGGTGCAATTCTGATATTTATTAATAATGATCAATCTAAGTATTTATCCAAATCAACCCAATGCCCTATATTTTGGGACAATTACCCTTGAGATTTTTATAAACCAAATTCACCCCATGTAAAACAGATGAAATTAACCTTAATTTTTATCTGATGTGTAATGGCTAATTGGCTAAATTTCTTTCATAAATATTACATATGTACTATTTTTTATCTCTATAAGTATTCTAGTTTGTCTAGATGAAGAAACAGAGGCTAAAAATAGTTAAACAAAAAATTACCTGTTTCAGAGCTTGAAAGCCAGATCTGTCCATGGAAATCTCCTGAGAGAAGAAGGTTTGGGGATGCATATAATGAGAGCAGAGAACTGGATAAAGAGATGTCTGGATCTATTTTTGGCTGTTGTTTAGATTTACTTTGTGACTGAAGGAAGTTTATCTGAGGCTTTCCCATTTGTAAAACTGAGATTCATATACAACTGTGCAAAATATGTGTCCCTTTACTTACCTCCCTCTAAGAGATTAATGAGATGATACTCAAGAAGCACTTTGATTTTCTCTGATGAAAGAAATGGATAAGTATGAAATGAAGCATTTACTACTTCTATCGAAGGTTTTTAAGATGGCAGCCTTTAAAAATTATCAAAGTGAAAGCTAAAGGAAGAAACAGCCGTGTACATTTTAAATCAAGTCAATAATTATTGTAGTGCACCTAATGATTCTCTGATATGTGTTTTGTGCATTAAAATTTACCAAGCACTTTTACATATATTATCTCATTTGATCCACAAAACTATCCTGTGAAGTATGTAGGCTAGGTGGTTTCATTACCATTTTTGAAATAAGAAAACTAATACTCAGGCCAAATGACTTGGTCACTGCTGCTCGACTCATGTGAAACAGTCCAGGGTTAAACTCAAGTTTCCTGGATTCCAAATCCCAATTCAGGTATCTTGCATTTCTGTCCACTTGTTAACATCATAGCATGCACATTGGACCATCTCCTCTGTGTTCACTTACATTCTATCCATGTTCAGGATTGAGTTTAAATCCCATTTCTGCTCTTAAGACTTCCCTTATCACTTTAACTGAAAGGCAGACTTTCTTATTCCATATTTTTTTTGTCCTTAAATATATTGTTTCCTGGAGGTCTTTCTAGTGAGTTGGATTTCCTGTATTCCATTCTTCCTTAAAATAAGCCTTTGGAATTCAGCCCAGCTTCCACACTTCTTGATAGCTGCCACCATCCATTTCATTCCTGGGACTGAGCCTCAGCACAAGGATTATTTAAAAGTTAAAAATAGTTGTATTCATAATCCCAGCATTTTGGGAGGCCGAGGTAGGTAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATCAGCCGGGTGTGGTGGCAGACACCTGTAATCCCAGCTACTCGGGAGGCTAAGGCAGGAGAATCACTAGAATTCAGGAGGCAGGGGTTGCAGTGAGTTGAGATGCGCCACTGCACTCCAGCTTGGGTGACAGAATGAGACTCTGTCTCAAAAAAAAAAAAAAAAGTTTTTTTCGTGTCGGTATTAATGCCTGGTATAATACCTCGCACACAGAAGGTGTTCCATATATGCCTGCTAAAGAAGTGGCTAGACTAATCAACAATTATGGATGGGAGGGAAGGTTCAGAAAGTTTGGTGACAATACTGGGAAAAAATGTTGGCACCTGATAATGGTGGACCTGGGATACCAGGCTGAAGAGTTTGAAACTTGCCCTTTTGGCAACAACAGATTTATTGGCACCAAGGAATAGTTTTGCTGGATTCCACTTTTGAACTCATCAAATTCCTTGCTTTTCTTTTCCTTGTCTTTTCAATCCTACTGGGACCTCCTCCCACCAGTGCCACTTTACTGGAGGCTTGTGATATGTATGACAGGCAGTAAAACCCAAGTGAATCAAGGAAGCCTGTTAAGAGCACTGATTTCTATGATGTCTCAGTTTGTTAACTAAATTGCAGGTTGTACTGCTTGGCCAGAGACAGCTGACAGGCAACTCTGCCTGAACAAGTAGCATCTCCAAAATGACATGTGCACTTTAGTTTCATTAGAGGCAGTGGTATCATGATTGCCTGGGCCATTGCAATAAATATGGTGATCATATGTATCCCTTGGGATTTGGGGTTGACAGCATAGTTGGGCTGCACTAAAGAGTCTTACTCTGACATAAATGACGGCAAAGTAGATCTCTGGGCCCCTCAGCAAGGAGGCAGAAGTTCATGTTGCAAAGAAAGTTCCACGGGCCTACTGAAATATTACCAATCAAAATTACAATTTCATTTATTGACAAGTCATATTTAACATTCTTCTAATGTTTTTTCTCACATGCCAATGTCCAAAAAGCTAAACCATCAGCTGCATGATGCTAAGGCTTTCAGCAGTCAGCAGAAGCAGTGGTAGTTGCGAGCTGGTTATTCAGAGGCAGCTACTGTGCTCCACATAACCATAAAGTGAACATTTTGACATTCCCGAAAATGTACCAACCTCCAAGTCACAAATCCTCTGTAGATGCCTGTGGATTGGCTTTTCAGATCCTCTTAAAAGCCAATCTGTGGTGGCAGGATTGTCTGAAGAGGGTAGACTTGGGCTTCTGGTACGTTACAGAAGGCATGGTTTCTCCATCTACACTATGCTATAAGACAACTGCTCTTCTCTGAAAAGAAACTACTGGAATCACACTTCTTGTAACTTCTCTCTATTCCCTTATTTAGTTGGTGGGATTGGATGAAGGATCTTCACATGTCTAGTGAGACTCCTTTCTTCTCTTCTTCCTATCCAAAGGGCTTTTCTTCCTGGGCTGAGTGTATCCAGGCCTATTTCATCTTTGTAGGAGGCAAAGGGAAAGAGAAGAGAACTAGAAATTGGTGTAGGCAGACTGATCTGTGGCCAGGTCTAAGTGTTGCCCCAATCCGTTCTCCCATCCAACTCCACAAGCAGTAAAGTTTGCTGGTCCTTTCATCTATGTCTATTTCTCAATTGGCTTGGATTTCACAATGAAGAGGGCTATGATTTATTGGCCCACTTAAACCTCAACATGGTAGAGTGGCAATTTTGTTTTTCTGGCTCTTATATTGCAATGAATATTTTTTATTTGACAGTCTGTTATAAACGAAAATAATTTTTTTCACTATCAGTTTCTACTCAAAATTAAATGGTAGCTCTAGAATAGTGGCCTGCATTAAATTTTTCTTTATGGTTATAGCCATGCAGATAGATGCATGAACTCAGAGGACTAAAAATGTGTTTCCATGTAATTTAAATGTACCTTTCTATACGGAACGGTCTGCTGTCATGCAACTTTCAAATAATGCATTTTATTATCATTATCTTTTCCGGCATTGATTAATCCTACTGTTTATTGGCTAAGTGTACATTTCCTATTGGTATGTTTCTGAGTCAAGGTGAAAGCAGTTAATACTTAAGAGTTGAGAAGCAAGTTTATTTAAATCTAGTCTTTCTTATGAGTCTGCCTAACAGTGATAGATTTTGTTGTTGAGCCACAGTTTATGAAAAGTGCATTAAAACCTCGAGCCGACCCATCTCTCTGAAGCAGCAGTTGGGCCATTACATTTTGGCAGGCACTTCAGATGTGTGTATGATTTTATGATCAGGTCTGCTTAATTCATCCCAACTCTTCAAAGAGGAAGGGAACTAAAATTCCTTGAGCATCTTCTAGTATGTGCTAGATGCCTGCATATGTTGTTTTATCCTCATGACAATCTCTCATGGTAGATAGTATTTTTTCAGCATTGAAGGTGAGAAAATTGAGGTTCAGAGAGTTTAAATAATATTGTCAAAAACATATAGGAAGTGATGAAGTTAAGCTTTAAGGCCAGGCCTGTCTACTCAAAAGCCTGTGATTGTTATATTAAGGGTTAAAAAAACAAAAAAGTTTGCAAGAGACAGACAAGTTATTTGAACGGAATGAAGTATAAGAAAACCTGTGCTTTCCTTAATTTTTCTTGAATCCTGTGGCCTTCTCAGTCTATCCTTTATTGAGGTTCAGAGAGGTTGCTACTTATATGGTAGCAAAAGTATTTCCCTTCCCTACTTACCCTACTATACAAAACAAACAAACAAACAAACAAACAAAAAACAGAAAACTTGATGATAAATGTCAATCAACACTCAGCCTCTGCATCTGATGAGCAACAGAAATTAGCGGGGACTGTGGTGAATTGGAAAACCTGTGCCTTTCTCTCCCAATCAGCTCTGGCTGATTGTCCTACAGAAAATGTTGGCTCTGTGTTACTAAATCTTACCATTTTTTAAAAGAACAGTCTAGCTGTTCACGAGAGATCTGATCTTAAAATGTTGAAAACTAATTCACATAGAAAAATACTATGTAGTACCCACCCCTCAAAAATAAAACTTATGTGAGCACTCGATCCAGCATAAAGTCTCTGAATTTGTAAGTTCTGTATTACACAAGGCAGCTAATAAGTAACTACTGGGAAAAATAATTAACAAACAAAAATCAAATCAAAATAATTTTCATTACTCTTCCAATAATTGTGCCTTCCAGATTTAGTACTGTTTGTGTATTGTGCCTCTCTGTGGTAGAGGCATGACTTCTGGTCCTCTATC	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_1644:HG2_10X_allpass_2359:HG3_10X_allpass_2881:HG3_Ill_Krunchall_19857:HG2_Ill_Krunchall_20273:HG3_PB_assemblyticsfalcon_8204:HG2_PB_assemblyticsfalcon_8218:HG2_PB_assemblyticsPBcR_7911:HG4_PB_SVrefine2Falcon1Dovetail_9112:HG3_PB_pbsv_14616:HG3_PB_SVrefine2PBcRDovetail_7035:HG3_PB_SVrefine2Falcon1Dovetail_9074:HG3_Ill_SVrefine2DISCOVARDovetail_10715:HG3_Ill_MetaSV_1628:HG2_PB_pbsv_14973:HG2_PB_SVrefine2PBcRplusDovetail_3311:HG2_PB_SVrefine2PB10Xhap12_10819:HG2_PB_SVrefine2Falcon2Bionano_7427:HG2_PB_SVrefine2Falcon1plusDovetail_3560:HG2_Ill_breakscan11_2140:HG2_Ill_MetaSV_1506:HG2_10X_SVrefine210Xhap12_10372;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10372:HG2_Ill_MetaSV_1506:HG2_Ill_breakscan11_2140:HG2_PB_SVrefine2Falcon1plusDovetail_3560:HG2_PB_SVrefine2Falcon2Bionano_7427:HG2_PB_SVrefine2PB10Xhap12_10819:HG2_PB_SVrefine2PBcRplusDovetail_3311:HG2_PB_pbsv_14973:HG3_Ill_MetaSV_1628:HG3_Ill_SVrefine2DISCOVARDovetail_10715:HG3_PB_SVrefine2Falcon1Dovetail_9074:HG3_PB_SVrefine2PBcRDovetail_7035:HG3_PB_pbsv_14616:HG4_PB_SVrefine2Falcon1Dovetail_9112;NumExactMatchSVs=14;ClusterMaxShiftDist=0.000799132;ClusterMaxSizeDiff=0.000799132;ClusterMaxEditDist=0.000799132;PBcalls=12;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-8761;DistBack=8083;DistForward=-8761;DistMin=-8761;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=14:80106289-80115051;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1152.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:72:72:1|0:9:37:56:0:0|1:64:0:0:17:0/1:62:17:0/1:420:198:8758:.:.
chr14	82499111	HG4_Ill_SVrefine2DISCOVARDovetail_10576	TTTACTCAGATCCTAGTTTAAGAACATAAACCTTTTCATGGATAAAAATGTAGTTCAGTTATTTTTAAGTATATATATTTGATAATATTTAAAATTAACGACAGTGTTTTTAATATATTTCACCAACGGAAGGTCGAGGATTGAATAGCTGGGTTGCACAGTGACTGCTTGTGGCGCAGTCGATGTTACATAGTCACCAAACCCAGTAGATGAACTGTATTCCTCAGACTTCCTGCCTGATGGGTGAGATCATGTGACCGAGTTCTAGCCAATAAAACAGCTGTGGGTGTAAAATATACTACTTTCGGGCCTGGACCAAAGAAAATTCTCTATTGCTATGACTTGAATCGTGTAGGGTGTGTTCTTAATCCAGTGTGACTGGTGTCCTTATTGGATTAAGGACACCAGTCACATGTTGCTATGTAACAGAGGAAACAAATACTTGAAGTGCTGCAGCTGCAAGACAATGAATGCCTGGGACTACCAGAAGCTAGAAGAGTCTAGGAGGAATCCTCTCCCAGAGGATTAGGCAAGAGCATGACCCTGACAATACTTTGATTTCAACTCCCCATGCCCAGAACTGTGAGAGAGGACATTTCTATTCTTTTCAGACACTAAAGTTTGTGATACATTTTTACAGGAGCCATAGCAAACTAATACACTACATTCTATGCCCTCTCTCATTTATCTCACCAGTTGGACAAATGCAAATATCCAGTAGAAAATGGAATGGCAGAGCTACTTGTTGGAAGTAGCTTGGATTTCAAGTAACTGCATGAACCAGGGACTATACCATATCTTCCTGTATTTGTCAGTGGTATGAAACACAAACAACCTTTGTTTTGTTAAGTCCTGAATTAGGAACTTGCCTGTAATCTCAAGCCTCTTTGATTGAATATATCATAAAGCCTGGCCTGTAAAAGTTGTGAAATTAGTGGCAATCACAATGCAGATTATTTTGGAGTTTTCACCTCTGGAGATGCTGCGGATGCAATGAATCAAATAATCCAACATATTGCCTGCATGTTAGGAGGCTGTGGATCAATACGGGTTCACCTTTTCATCTCAGGTCTAGTGATCAGGACTGTAGAGGCCACATTGTTCTGCCTCATAAATTTACGACCCATGTGAAATAACATGAGTGACAGTAAGGACAAGGAGATTGGCTGTAACTTGGGAGGGTAAAACTACCCTTTCATCTCCTTTAGTACTATTGTCAAAGTATTCAGTTTTCTTTGATAGTGTTGGTACTTTTTCTGAAATTATAACACAAGGAGAAAGGGGAAATTACTATTTATAGCTGAACAATTAAGTTTCTGTAAATACAACCCATGGATGTATGTAATTGCACAAACCCTCTTCATCTTATGACATCTAGGGAAGATTTTGGAAGTCAAATATTCACTTTAACATCTTTAGCTATTTGTGCTTGGAAAGGCAAAAGAGTAGACTATTAAAGGAAAACACGCCCAATTTAGCGAGATGCAACCAGCAGGGAATATAATCTCACCTGGATTTAGCACTCTGTATTTGAGACCCTCATTGAACACTAACTAGTTAGCTGCATGAATTGCTGGGAATTTGCCCAGACCCTGTGGTCTCCCTTCTGTCATCTGTTGACAGAGAGATTGGAGGGCTTTTTCAAGGTGTTTGGAGAAGCCAAAGCTTTCCAGATGTTTCCTCAGAGCCTAACTCAAGAAGCTTCCACTAGAGTTGTCCTGCCTTTATGTGTTTCACACACCGTTTCAGGAGAAAACAAACAAACAAATAAACCGAATGTAAAATGGTGCAGTTGCTTTGGAAAACAGTTTGGCATTCCAGAAAAAGTTAAACATAGCAATAGAATTTCTTACCATATGACCTATTAATTTTACTTGTAGGTGTATACCCCCCAAAACTGAAAACAGGGACTTAGATACTTGTGTGTTTATTGCTGCATTATTCCCAATTGCCAAAAGGTAGAAACAACTCAAGTGTCCATCAACAGATAAAATAATAAGCAAAACTGAGGTATATACATACAGTGCAATACTACACAGACGTAAGAAAGGATGAAACTGATACATGCTACAGCATGGATAAATCTTGAAAACATTATGATAATTTAAAAAAGATGGATATTGTTATTATTACACTTATATACAGAGACAAAGTAGATTAGAAGTTGTTAGAAGATGGTGGGGAGGATAAATGGTGAGTTATTGCTTAATGTGTACAAAGTATCTAGAATTATAGAAAAGTTTTGGAAATAGTGATAATTGTACAACATCACAAATGTTATTTATATTACTAAATTTTATTAATAATTGTTGAAATGGCAAGCTTTATGTTCTATTTTACCACAATAAAAATAATTAAAAATGAAAAAATATTTTTGGAATTGAAAATCAAACAAGTGGATCTTAAATGTTCTCATCACAAAGAAATGATAAGTATTTGAGGTGATAGATATCTTAATTAGCCAAATTTAATCATTCCACAATACACATGTGTATCAAAGCATCTGATTGTGCCCTATACATAGATAGAATATTTGTCAATTAAAAACAAAATAGAACGTGAAAAAAATAATAAAAAATATCCTTTGACCAAAGTGTTCCATGTCAACAAAAATTTGGGGACTGAATGTATCATGCCCAACAACCAATACAACTTTTTCCTTGAAGATCAGGACAGAATCTTTTTATAGGATTGCCTCACTCTTCCAGAGTTCATATTTCCTTAGACATAGAGATAATTCTGCCAGATGAAGCAACTTGATTTCCATCAGCTCTGGCTCTCAGAAGGAGAGCTGTGTAATGATGACAGTTTGGAGCCAACAATGGTTGCCTGGGCAGCTCTGGCATTGTGCCGTGAGTTGAGTTAGTAACTCCATCAGTAACGGTTTCAAGGCTAAATGCTTTAGAGAGAACACATGGCTCTAGGTTCAAATTAGAGCGTTGTTGTGGTGTCCCTGAATATTGGAGGGTCAGTAGGGGAAGCCAAGAGACACTTTGAGGCTTTCTTTCTTCCTTCCTATTTAAGTAAATAGGGTTCCTGAGGGTTGTCAGGAGGAGGACTTTTGAGTGTTTTATGCAATGGTTGATGCTGCTACATATTTTATTAGAAATTATCCTTACCTACAAAGTGCCTGACAATAGTGATTATTCTATATAATCTTCAAAGAAGTACATGTTCCTTTATCTTTTTCTCAGTGTATGGTCAACATGTGTGATGGTTGACTGAGCCTCTAACTGGGTAATGTGGAATATGTTTTTCCCCTCCACACCCCTTCTTTTTGCCTTATGTTCAGGATCTATCCATTGACATAGGCTGATGAAGAAGGTTTCTTTAATGAGATTAGCCAGAACTGTCGACAGTCAGAAAAACCTTATATTGTTTTTTTTGGGCTTTCCCATATGATGGAGCCCCACCATTAACGAAGTCTCTTTTCATTGTTTTTTTTTTTTTTTGGTCTTAGAGAAGAGAAACGTTTAGGGACATACTTGAAGAATTATCAATATACATTCCTATATTCATTGAGAACAACATTTGCATAGTATTAACATTTTACCATTTGCCAGTTATAAAACAACACATAGCAAGGTGAAATGGCTATTTATCTTTTCTTCTTATATTTTGTGAAGCAATGTGAATATGCAATTATATGAGAATGCATCTTATTTATGTTAAACCATTGGCAATAAAGAAAGTAATTGGCAGCAGAGCTCTCTTTAAGGCAATGTTCAGCCATAAATGCCTGGGAAAGAATTTACAAAATGTTAAAGTAAATTTTTAACATTCCACTTTTATTAAGAGATGCCCCATCAGGGTGAGTGTGCCCTTTTCTTTGCTCTGCTAAATTCAGCATATATCATTAAAGATTATTCTAAATCCCCAAGAAGTACCAGGCCCCATTTATAAAAGACAGGACTTATGTTTCCAAATAGCCATCATCAAAGAATTTTGTAGCAACATCATAGTGAATTTGACTGGCCAATCTTAGATGCATATATATATAGTCTGAATAAAATCAGCCTTTCAATGCTCAAATCCTTTCAACATTGCATCTCTGTCACCCCAGTGACTGAGCCTCAAAACTTGCTGGAGGTAGAGCAGACATCAGAGAAATAAAGTAGGTGGCATATTGAATTACATGTGCATGCCAGCTGGATTATTTTTCCTTAGGAAAGATGAAACCAACAGCAAAGGTGAGGTCATTTTTTATTAGGATGATATTA	AACATAAATC	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1508:HG4_Ill_GATKHCSBGrefine_10290:HG3_PB_pbsv_14627:HG2_PB_pbsv_14983:HG4_PB_pbsv_14913:HG2_Ill_tnscope_1646:HG2_Ill_SpiralSDKrefine_5133:HG4_PB_assemblyticsfalcon_8117:HG4_PB_SVrefine2PBcRDovetail_7449:HG4_PB_SVrefine2Falcon1Dovetail_9122:HG4_Ill_SVrefine2DISCOVARDovetail_10576:HG3_PB_assemblyticsfalcon_8222:HG3_PB_SVrefine2PBcRDovetail_7037:HG3_PB_SVrefine2Falcon1Dovetail_9080:HG2_PB_assemblyticsfalcon_8236:HG2_PB_assemblyticsPBcR_7936:HG2_PB_SVrefine2PBcRplusDovetail_3316:HG2_PB_SVrefine2PB10Xhap12_10827:HG2_PB_SVrefine2Falcon2Bionano_7433:HG2_PB_SVrefine2Falcon1plusDovetail_3566:HG2_Ill_SVrefine2DISCOVARplusDovetail_3960:HG2_10X_SVrefine210Xhap12_10378:HG3_10X_allpass_2884:HG4_Ill_Krunchall_20597:HG3_Ill_Krunchall_19874:HG2_Ill_Krunchall_20288:HG4_Ill_MetaSV_1580:HG4_10X_allpass_2762:HG2_10X_allpass_2361:HG3_Ill_MetaSV_1630;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10378:HG2_Ill_SVrefine2DISCOVARplusDovetail_3960:HG2_PB_SVrefine2Falcon1plusDovetail_3566:HG2_PB_SVrefine2Falcon2Bionano_7433:HG2_PB_SVrefine2PB10Xhap12_10827:HG2_PB_SVrefine2PBcRplusDovetail_3316:HG2_PB_assemblyticsPBcR_7936:HG2_PB_assemblyticsfalcon_8236:HG3_PB_SVrefine2Falcon1Dovetail_9080:HG3_PB_SVrefine2PBcRDovetail_7037:HG3_PB_assemblyticsfalcon_8222:HG4_Ill_SVrefine2DISCOVARDovetail_10576:HG4_PB_SVrefine2Falcon1Dovetail_9122:HG4_PB_SVrefine2PBcRDovetail_7449:HG4_PB_assemblyticsfalcon_8117;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0769849;ClusterMaxSizeDiff=0.0769849;ClusterMaxEditDist=0.0769849;PBcalls=15;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=12;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-4210;DistBack=-22;DistForward=-4188;DistMin=-4188;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=14:82499111-82503330;PctSeqSimilarity=0.9987;PctSizeSimilarity=0.9995;PctRecOverlap=0.9974;SizeDiff=2;StartDistance=-11;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1153.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:59:41:./.:26:9:15:13:1|0:0:20:50:0:0/1:65:15:0/1:332:170:4114:.:.
chr14	83019601	HG3_Ill_GATKHCSBGrefine_9842	AAGTAATCAACTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1509:HG4_Ill_MetaSV_1582:HG3_Ill_MetaSV_1632:HG4_Ill_Krunchall_20602:HG2_Ill_Krunchall_20292:HG2_PB_assemblyticsPBcR_7942:HG4_PB_assemblyticsfalcon_8121:HG3_PB_assemblyticsfalcon_8226:HG2_PB_assemblyticsfalcon_8242:HG4_Ill_Spiral_1158:HG2_Ill_Spiral_992:HG4_PB_pbsv_14915:HG2_PB_pbsv_14985:HG3_PB_pbsv_14629:HG3_PB_HySA_22558:HG2_PB_HySA_27286:HG2_Ill_MetaSV_1510:HG4_PB_SVrefine2PBcRDovetail_7451:HG4_PB_SVrefine2Falcon1Dovetail_9124:HG4_Ill_svaba_18618:HG4_Ill_scalpel_13763:HG4_Ill_manta_3508:HG4_Ill_SVrefine2DISCOVARDovetail_10580:HG4_Ill_GATKHCSBGrefine_10296:HG4_10X_allpass_2764:HG3_PB_SVrefine2Falcon1Dovetail_9082:HG3_Ill_svaba_18768:HG3_Ill_scalpel_14373:HG3_Ill_manta_3363:HG3_Ill_SVrefine2DISCOVARDovetail_10723:HG3_Ill_GATKHCSBGrefine_9842:HG3_10X_allpass_2885:HG2_PB_SVrefine2PBcRplusDovetail_3318:HG2_PB_SVrefine2PB10Xhap12_10829:HG2_PB_SVrefine2Falcon2Bionano_7435:HG2_PB_SVrefine2Falcon1plusDovetail_3568:HG2_Ill_svaba_18618:HG2_Ill_scalpel_14125:HG2_Ill_manta_4113:HG2_Ill_breakscan11_2142:HG2_Ill_SpiralSDKrefine_5137:HG2_Ill_SVrefine2DISCOVARplusDovetail_3962:HG2_Ill_GATKHCSBGrefine_9955:HG2_10X_allpass_2362:HG2_10X_SVrefine210Xhap12_10380:HG4_Ill_MetaSV_1581:HG3_Ill_Spiral_15504:HG3_Ill_MetaSV_1631:HG2_Ill_tnscope_1647;NumClusterSVs=49;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10380:HG2_10X_allpass_2362:HG2_Ill_GATKHCSBGrefine_9955:HG2_Ill_SVrefine2DISCOVARplusDovetail_3962:HG2_Ill_SpiralSDKrefine_5137:HG2_Ill_breakscan11_2142:HG2_Ill_manta_4113:HG2_Ill_scalpel_14125:HG2_Ill_svaba_18618:HG2_PB_SVrefine2Falcon1plusDovetail_3568:HG2_PB_SVrefine2Falcon2Bionano_7435:HG2_PB_SVrefine2PB10Xhap12_10829:HG2_PB_SVrefine2PBcRplusDovetail_3318:HG3_10X_allpass_2885:HG3_Ill_GATKHCSBGrefine_9842:HG3_Ill_SVrefine2DISCOVARDovetail_10723:HG3_Ill_manta_3363:HG3_Ill_scalpel_14373:HG3_Ill_svaba_18768:HG3_PB_SVrefine2Falcon1Dovetail_9082:HG4_10X_allpass_2764:HG4_Ill_GATKHCSBGrefine_10296:HG4_Ill_SVrefine2DISCOVARDovetail_10580:HG4_Ill_manta_3508:HG4_Ill_scalpel_13763:HG4_Ill_svaba_18618:HG4_PB_SVrefine2Falcon1Dovetail_9124:HG4_PB_SVrefine2PBcRDovetail_7451;NumExactMatchSVs=28;ClusterMaxShiftDist=0.269103;ClusterMaxSizeDiff=0.269103;ClusterMaxEditDist=0.269103;PBcalls=16;Illcalls=29;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=0;HG2count=22;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-281;DistBack=39049;DistForward=15260;DistMin=15260;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=14:83019602-83019897;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1154.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:16:0:20:1/1:0:19:0:20:1/1:0:44:./.:.:.:.:.:.
chr14	83635836	HG2_PB_SVrefine2PBcRplusDovetail_3322	CTCCAAAGACCTTTATTTATTTTTTTTTTTTTTAAATTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCGCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGTGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTAGAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAAGAGATTCTGGTATGTGGTGT	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_20297:HG2_PB_assemblyticsPBcR_7948:HG4_PB_assemblyticsfalcon_8126:HG3_PB_assemblyticsfalcon_8236:HG2_PB_assemblyticsfalcon_8248:HG4_Ill_Spiral_1159:HG2_Ill_Spiral_993:HG2_PB_HySA_27297:HG2_Ill_tnscope_1648:HG4_PB_pbsv_14921:HG4_PB_SVrefine2PBcRDovetail_7454:HG4_PB_SVrefine2Falcon1Dovetail_9128:HG4_Ill_SVrefine2DISCOVARDovetail_10584:HG4_Ill_MetaSV_1583:HG4_Ill_GATKHCSBGrefine_10301:HG4_10X_allpass_2766:HG3_PB_pbsv_14633:HG3_PB_SVrefine2Falcon1Dovetail_9087:HG3_Ill_MetaSV_1633:HG3_Ill_GATKHCSBGrefine_9845:HG3_10X_allpass_2886:HG2_PB_pbsv_14989:HG2_PB_SVrefine2PBcRplusDovetail_3322:HG2_PB_SVrefine2PB10Xhap12_10833:HG2_PB_SVrefine2Falcon2Bionano_7438:HG2_PB_SVrefine2Falcon1plusDovetail_3571:HG2_Ill_manta_4116:HG2_Ill_breakscan11_2143:HG2_Ill_SVrefine2DISCOVARplusDovetail_3966:HG2_Ill_MetaSV_1511:HG2_Ill_GATKHCSBGrefine_9959:HG2_10X_allpass_2363:HG2_10X_SVrefine210Xhap12_10383:HG4_Ill_Krunchall_20607:HG3_Ill_Krunchall_19886;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10383:HG2_10X_allpass_2363:HG2_Ill_GATKHCSBGrefine_9959:HG2_Ill_MetaSV_1511:HG2_Ill_SVrefine2DISCOVARplusDovetail_3966:HG2_Ill_breakscan11_2143:HG2_Ill_manta_4116:HG2_PB_SVrefine2Falcon1plusDovetail_3571:HG2_PB_SVrefine2Falcon2Bionano_7438:HG2_PB_SVrefine2PB10Xhap12_10833:HG2_PB_SVrefine2PBcRplusDovetail_3322:HG2_PB_pbsv_14989:HG3_10X_allpass_2886:HG3_Ill_GATKHCSBGrefine_9845:HG3_Ill_MetaSV_1633:HG3_PB_SVrefine2Falcon1Dovetail_9087:HG3_PB_pbsv_14633:HG4_10X_allpass_2766:HG4_Ill_GATKHCSBGrefine_10301:HG4_Ill_MetaSV_1583:HG4_Ill_SVrefine2DISCOVARDovetail_10584:HG4_PB_SVrefine2Falcon1Dovetail_9128:HG4_PB_SVrefine2PBcRDovetail_7454:HG4_PB_pbsv_14921;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0515625;ClusterMaxSizeDiff=0.0515625;ClusterMaxEditDist=0.122161;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-647;DistBack=3706;DistForward=-631;DistMin=-631;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=14:83635837-83636500;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1155.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:./.:0:0:0:0:1/1:0:26:0:25:1/1:0:29:./.:2:18:672:.:.
chr14	83900391	HG4_Ill_SVrefine2DISCOVARDovetail_10585	ATATATATACATATATATATATATGTATATATACATATATATATGTATATATACATATATATATGTATATATACATATATATATATATATG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_14990:HG4_PB_HySA_21841:HG4_PB_pbsv_14922:HG2_PB_HySA_27300:HG3_PB_pbsv_14635:HG4_PB_assemblyticsfalcon_8129:HG4_PB_SVrefine2PBcRDovetail_7455:HG4_PB_SVrefine2Falcon1Dovetail_9129:HG4_Ill_svaba_18628:HG4_Ill_scalpel_13768:HG4_Ill_manta_3510:HG4_Ill_SVrefine2DISCOVARDovetail_10585:HG4_Ill_Krunchall_20612:HG4_Ill_GATKHC_23795:HG4_Ill_GATKHCSBGrefine_10302:HG4_Ill_250bpfermikitraw_19653:HG4_Ill_150bpfermikitraw_18938:HG4_10X_allpass_2767:HG3_PB_assemblyticsfalcon_8241:HG3_PB_SVrefine2PBcRDovetail_7038:HG3_PB_SVrefine2Falcon1Dovetail_9088:HG3_Ill_svaba_18780:HG3_Ill_scalpel_14378:HG3_Ill_SVrefine2DISCOVARDovetail_10729:HG3_Ill_Krunchall_19891:HG3_Ill_GATKHC_23711:HG3_Ill_GATKHCSBGrefine_9847:HG3_Ill_250bpfermikitraw_19363:HG3_Ill_150bpfermikitraw_18836:HG2_PB_SVrefine2PBcRplusDovetail_3323:HG2_PB_SVrefine2PB10Xhap12_10834:HG2_PB_SVrefine2Falcon2Bionano_7439:HG2_PB_SVrefine2Falcon1plusDovetail_3572:HG2_Ill_svaba_18626:HG2_Ill_scalpel_14130:HG2_Ill_manta_4117:HG2_Ill_SpiralSDKrefine_5141:HG2_Ill_SVrefine2DISCOVARplusDovetail_3968:HG2_Ill_Krunchall_20300:HG2_Ill_GATKHC_23862:HG2_Ill_GATKHCSBGrefine_9960:HG2_Ill_250bpfermikitraw_19949:HG2_Ill_150bpfermikitraw_18817:HG2_10X_allpass_2364:HG2_10X_SVrefine210Xhap12_10384;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10384:HG2_10X_allpass_2364:HG2_Ill_150bpfermikitraw_18817:HG2_Ill_250bpfermikitraw_19949:HG2_Ill_GATKHCSBGrefine_9960:HG2_Ill_GATKHC_23862:HG2_Ill_Krunchall_20300:HG2_Ill_SVrefine2DISCOVARplusDovetail_3968:HG2_Ill_SpiralSDKrefine_5141:HG2_Ill_manta_4117:HG2_Ill_scalpel_14130:HG2_Ill_svaba_18626:HG2_PB_SVrefine2Falcon1plusDovetail_3572:HG2_PB_SVrefine2Falcon2Bionano_7439:HG2_PB_SVrefine2PB10Xhap12_10834:HG2_PB_SVrefine2PBcRplusDovetail_3323:HG3_Ill_150bpfermikitraw_18836:HG3_Ill_250bpfermikitraw_19363:HG3_Ill_GATKHCSBGrefine_9847:HG3_Ill_GATKHC_23711:HG3_Ill_Krunchall_19891:HG3_Ill_SVrefine2DISCOVARDovetail_10729:HG3_Ill_scalpel_14378:HG3_Ill_svaba_18780:HG3_PB_SVrefine2Falcon1Dovetail_9088:HG3_PB_SVrefine2PBcRDovetail_7038:HG3_PB_assemblyticsfalcon_8241:HG4_10X_allpass_2767:HG4_Ill_150bpfermikitraw_18938:HG4_Ill_250bpfermikitraw_19653:HG4_Ill_GATKHCSBGrefine_10302:HG4_Ill_GATKHC_23795:HG4_Ill_Krunchall_20612:HG4_Ill_SVrefine2DISCOVARDovetail_10585:HG4_Ill_manta_3510:HG4_Ill_scalpel_13768:HG4_Ill_svaba_18628:HG4_PB_SVrefine2Falcon1Dovetail_9129:HG4_PB_SVrefine2PBcRDovetail_7455:HG4_PB_assemblyticsfalcon_8129;NumExactMatchSVs=40;ClusterMaxShiftDist=0.0564972;ClusterMaxSizeDiff=0.0564972;ClusterMaxEditDist=0.0568182;PBcalls=15;Illcalls=27;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-90;DistBack=48027;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=14:83900392-83900500;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1156.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:40:1/1:2:19:1:20:./.:2:20:0:22:1/1:0:53:./.:.:.:.:.:.
chr14	85153959	HG2_Ill_SVrefine2DISCOVARplusDovetail_3974	TTTCTGCAGTTTCTTTTGACTCTCATTAAGTCTGATTTGGTTTCTTGTTAAGCAAAATGGTTGGAACAATTCTGGAGCTCCATCTCTGCACAAAAGTAACTGGAGGAAAAGAGGTCATCTCATCATGTGGCTTTTTCACATAAAGAAGGAAACAAAATCCCCAGCACACGCTCTTAAATGTCTTTAACTAGGATTAGGTC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3974:HG3_PB_pbsv_14641:HG2_PB_pbsv_14994:HG3_PB_HySA_22582:HG3_Ill_SVrefine2DISCOVARDovetail_10735:HG2_PB_SVrefine2PBcRplusDovetail_3326:HG2_PB_SVrefine2PB10Xhap12_10837:HG2_PB_SVrefine2Falcon1plusDovetail_3576;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3974:HG3_PB_HySA_22582:HG3_Ill_SVrefine2DISCOVARDovetail_10735:HG2_PB_SVrefine2PBcRplusDovetail_3326:HG2_PB_SVrefine2PB10Xhap12_10837:HG2_PB_SVrefine2Falcon1plusDovetail_3576;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.0356234;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-199;DistBack=3919;DistForward=-200;DistMin=-200;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=199;REFWIDENED=14:85153960-85154357;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1157.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:26:0:0:30:./.:15:1:0:4:0/1:19:15:./.:.:.:.:.:.
chr14	85423203	HG4_Ill_250bpfermikitraw_19664	GTATATCCATAGATGGATAGATGGATGAATGGGTAGGTGGATGGATGAATGGATGGATGGATGGATGGATAAATAGATGCATTGATACATCAA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3976:HG3_PB_pbsv_14643:HG2_PB_pbsv_14996:HG4_PB_pbsv_14927:HG4_Ill_GATKHCSBGrefine_10310:HG4_Ill_250bpfermikitraw_19664:HG3_Ill_manta_3368:HG3_Ill_Krunchall_19904:HG3_Ill_GATKHCSBGrefine_9852:HG3_Ill_250bpfermikitraw_19372:HG2_Ill_SpiralSDKrefine_5157:HG2_Ill_GATKHCSBGrefine_9966:HG2_Ill_250bpfermikitraw_19963:HG3_Ill_SVrefine2DISCOVARDovetail_10736:HG2_PB_SVrefine2PB10Xhap12_10839:HG2_PB_SVrefine2Falcon1plusDovetail_3577;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_19963:HG2_Ill_GATKHCSBGrefine_9966:HG2_Ill_SpiralSDKrefine_5157:HG3_Ill_250bpfermikitraw_19372:HG3_Ill_GATKHCSBGrefine_9852:HG3_Ill_Krunchall_19904:HG3_Ill_manta_3368:HG4_Ill_250bpfermikitraw_19664:HG4_Ill_GATKHCSBGrefine_10310;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0218579;ClusterMaxSizeDiff=0.0217391;ClusterMaxEditDist=0.130435;PBcalls=5;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-92;DistBack=44059;DistForward=-86;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=173;REFWIDENED=14:85423119-85423383;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:37:0|1:35:6:2:29:./.:40:3:0:12:0/1:14:22:./.:.:.:.:.:.
chr14	87410306	HG2_Ill_svaba_18671	TTGCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTCCCTTCCCTCCTCCCTTCCTTCCTTCCTTCCTTCCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_15008:HG4_Ill_GATKHC_23841:HG4_PB_pbsv_14940:HG4_Ill_GATKHCSBGrefine_10320:HG3_Ill_GATKHC_23754:HG3_Ill_GATKHCSBGrefine_9866:HG2_Ill_GATKHC_23907:HG4_Ill_svaba_18677:HG4_Ill_scalpel_13802:HG3_Ill_svaba_18828:HG3_Ill_scalpel_14403:HG2_Ill_svaba_18671:HG2_Ill_scalpel_14156:HG4_PB_HySA_21885:HG4_PB_assemblyticsfalcon_8160:HG3_PB_assemblyticsfalcon_8272:HG3_PB_pbsv_14656;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_scalpel_14156:HG2_Ill_svaba_18671:HG3_Ill_scalpel_14403:HG3_Ill_svaba_18828:HG4_Ill_scalpel_13802:HG4_Ill_svaba_18677;NumExactMatchSVs=6;ClusterMaxShiftDist=0.129496;ClusterMaxSizeDiff=0.129496;ClusterMaxEditDist=0.316547;PBcalls=6;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-72;DistBack=-45;DistForward=-44;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=14:87410305-87410380;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1161.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:0:0:0|1:35:4:0:20:./.:35:4:4:33:0/1:7:6:./.:.:.:.:.:.
chr14	87858056	HG2_Ill_SVrefine2DISCOVARplusDovetail_3986	TAAAATCGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGAGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAATAAAAAAATAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_21890:HG2_10X_allpass_2366:HG3_PB_HySA_22614:HG4_Ill_Krunchall_20661:HG4_PB_assemblyticsfalcon_8163:HG2_PB_assemblyticsPBcR_7983:HG3_PB_assemblyticsfalcon_8277:HG2_PB_assemblyticsfalcon_8291:HG4_Ill_MetaSV_1586:HG3_Ill_MetaSV_1641:HG2_Ill_tnscope_1650:HG2_Ill_MetaSV_1516:HG4_PB_SVrefine2PBcRDovetail_7462:HG4_PB_SVrefine2Falcon1Dovetail_9140:HG4_Ill_svaba_18681:HG4_Ill_SVrefine2DISCOVARDovetail_10599:HG4_Ill_GATKHCSBGrefine_10321:HG4_10X_allpass_2769:HG3_PB_pbsv_14657:HG3_PB_SVrefine2Falcon1Dovetail_9102:HG3_Ill_svaba_18832:HG3_Ill_scalpel_14404:HG3_Ill_SVrefine2DISCOVARDovetail_10748:HG3_Ill_GATKHCSBGrefine_9867:HG3_10X_allpass_2893:HG2_PB_pbsv_15009:HG2_PB_SVrefine2PBcRplusDovetail_3334:HG2_PB_SVrefine2PB10Xhap12_10846:HG2_PB_SVrefine2Falcon2Bionano_7448:HG2_PB_SVrefine2Falcon1plusDovetail_3585:HG2_Ill_svaba_18675:HG2_Ill_scalpel_14160:HG2_Ill_manta_4125:HG2_Ill_SVrefine2DISCOVARplusDovetail_3986:HG2_Ill_GATKHCSBGrefine_9978:HG2_10X_SVrefine210Xhap12_10397:HG4_PB_pbsv_14941:HG2_Ill_breakscan11_2145:HG2_PB_HySA_27347;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10397:HG2_Ill_GATKHCSBGrefine_9978:HG2_Ill_SVrefine2DISCOVARplusDovetail_3986:HG2_Ill_manta_4125:HG2_Ill_scalpel_14160:HG2_Ill_svaba_18675:HG2_PB_SVrefine2Falcon1plusDovetail_3585:HG2_PB_SVrefine2Falcon2Bionano_7448:HG2_PB_SVrefine2PB10Xhap12_10846:HG2_PB_SVrefine2PBcRplusDovetail_3334:HG2_PB_pbsv_15009:HG3_10X_allpass_2893:HG3_Ill_GATKHCSBGrefine_9867:HG3_Ill_SVrefine2DISCOVARDovetail_10748:HG3_Ill_scalpel_14404:HG3_Ill_svaba_18832:HG3_PB_SVrefine2Falcon1Dovetail_9102:HG3_PB_pbsv_14657:HG4_10X_allpass_2769:HG4_Ill_GATKHCSBGrefine_10321:HG4_Ill_SVrefine2DISCOVARDovetail_10599:HG4_Ill_svaba_18681:HG4_PB_SVrefine2Falcon1Dovetail_9140:HG4_PB_SVrefine2PBcRDovetail_7462;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0795107;ClusterMaxSizeDiff=0.0795107;ClusterMaxEditDist=0.0795107;PBcalls=17;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-157;DistForward=20142;DistMin=-157;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=14:87858057-87858391;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1162.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:0:0:1/1:1:22:1:43:1/1:0:17:0:21:1/1:0:47:0/1:2:8:.:.:.
chr14	88139121	HG2_PB_assemblyticsfalcon_8292	CCTGTAGTCCCGGCTGCTCGGGAGGCTGAGGCAGAAGAATGGCAAGAACCCAGGAGGCAGAGCTTGCAGTGAGCCAAGATCGTGCCACTGCATTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAATTAATAATTTTTTAAAGTCTACATTAAAAAGAAAACAAGAAAAATATTTGAAGATCATAATCACTGGCAATGGGAAAGAGACTTATGACAAAAAATACCCTAAACTGTAAAAATAAACAAAAGGGATTACTGAGTTTTATTTCTGTGCAATCCTGGGCTTAACTTCCTATTGACTGGGTTATTTTACATCTTTTTAGGGGCAGAGATTAATTTGTAGATTTTTTCAGAAAAAGATGCAAATAATTTCTGGTCAGTGAAACAAAAACTTCAATGGTTCTGTTTATTGCTGTGTGAGATATTAATTAGTTTTCTCTCTAACCCAGTAATCTTATCTTTTTTAAAAAAGATACTTATATATGCCTAGCTTCACAAATGTTACTTGTTTCTCTCATTAACAAAATGAAGAATAAAATTTTTGGCACATGTTCATTTTGTATTTGTATGAGAGACATGCTTTTGTCTTTTTGAAAATTGTATTTCAAACCTAATACATTTAAAAAGTTGAATTTCATTAAATATAAGTCTGTAAACTATAGAAAGAATCTGGGCTATAAATATGAAGACTTAGACTTGAATCCTGGTAATCTGCAGAACTTTTATTTTTTTAATCCTTTTTATTTTAGAAGAGTTTTAGATTTATAGAAAAGTGGCAAAGATAGTCCAGAGATTTCTCATATATTCCACACTCAATTTCCTCCTGTAGTTAGTTCCTTATATAACCACAGAGCATTTGTTACAACTTGAGAACCAACACTGGTACATTACCATAAACAGAACTCCACACTTTATTTAAATGTCACTAGTTTTTTGTTTTTGCTTTTTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGCCTTTTTCTGTACCAGGATCCCATTCAGGACACTATATTCGATTTATTCTTATGTCTCCTTAGGCTCAACTGGTCTATGACACTTTCTCATAATTTCCTTGGTTTTGTTGTTTGTTGGTTGGTTGGTTGGTTGGATTGTTGGCTGGTTTTTTTTTTTTAAGACTTTTTTTAAAAAGCAGTTTTATGTTCACAGCAAAATTCAGAGGAAGATGCAAAGAGTTCCCATGTGCCCCCTGGTCCCACACTCACAACCACCCACTGTGTCAACATCCCCCACAAGAGTCCTACTTTTGTTGTAATTGATGAACCTACACTGACACATCATCATCACCCAAAGCCCGTAGTTTACATCAGGGTCTACTCTTAATGTTGTAACTTCTATGGGTTTAGACAAATGTATAATGACATGTATCCACCATTATCGTATCACAGAGAGTCTTTTCCTACCCTAAAAATCTTTTGTGTATTAATCACTTCCTAACTTTCCTTGTTTTTGACAACTTGAGCAGTTTTGAGGAGTACCAGTGAAGTATTTTGCAGAATGCCTCTTCATTCGAGTTTGTTTGATGTTTTTATCATGGTTATACTAGAGTTATAGGTCTTTAGGTATAAGACCACAGAAGTTAAATTTTATTCATATCATATCATATCAACAGTGCATGCTATCAACGTGACTTATCTTTGGGAGCTAGTCATTAAACACAGTCTGCTTCAGGTGGTAGAGGAAAGATTGAGCTGCACTCCATACAGGGAACAGCAGCTCATAAATTATTTGGAATTCTTTGGTACAGAAGATTTGTTTCCTTTCCCCCATTTATTTACTTATTTGGTCATTTATTTATATCGGCATGGACTCATGGATATTTATTTTGCACTTTGGATTAAATTCAATACTGTATCACGTGTTTTATTACTCAAATCGTCCCAGCTTTGGCCACTGGGAGTTCTTTCAGGTTGGTCCCTGCCTCCCTTTGACATGCTCCCACCTTTTGTTTTG	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1642:HG2_PB_pbsv_15010:HG2_Ill_tnscope_1651:HG3_PB_assemblyticsfalcon_8279:HG2_PB_assemblyticsfalcon_8292:HG2_PB_SVrefine2PBcRplusDovetail_3335:HG2_PB_SVrefine2PB10Xhap12_10847:HG2_PB_SVrefine2Falcon2Bionano_7449:HG2_PB_SVrefine2Falcon1plusDovetail_3586:HG2_PB_PB10Xdip_10104:HG2_Ill_SVrefine2DISCOVARplusDovetail_3987:HG2_10X_SVrefine210Xhap12_10400:HG2_Ill_breakscan11_2146:HG2_PB_assemblyticsPBcR_7986:HG2_Ill_MetaSV_1517:HG3_10X_allpass_2894:HG3_PB_pbsv_14658:HG2_10X_allpass_2367;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10400:HG2_Ill_SVrefine2DISCOVARplusDovetail_3987:HG2_PB_PB10Xdip_10104:HG2_PB_SVrefine2Falcon1plusDovetail_3586:HG2_PB_SVrefine2Falcon2Bionano_7449:HG2_PB_SVrefine2PB10Xhap12_10847:HG2_PB_SVrefine2PBcRplusDovetail_3335:HG2_PB_assemblyticsfalcon_8292:HG3_PB_assemblyticsfalcon_8279;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0245339;ClusterMaxSizeDiff=0.0245339;ClusterMaxEditDist=0.0245339;PBcalls=10;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-2015;DistBack=-2016;DistForward=23570;DistMin=-2016;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=14:88139121-88141136;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9995;PctRecOverlap=0.999;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:0:0:./.:8:22:8:4:1|0:0:26:46:0:0/1:42:17:0/1:150:67:1952:.:.
chr14	88164707	HG4_PB_SVrefine2Falcon1Dovetail_9141	ACATACTCTGGTGGCATAATGTGGTCTTCTGAGATGCTGCAGGTGACGGTTTTACTAAACGTTTTGCCCTGCCATGCCCACCTACCACGTTGTCAACTGTGAGGTAAATATGCTCAATTTTATGTCTTAGTGTGGTAGCACCCCCTGTCTAAATCCCAAATTCTCTATTAGCTGCTCTAGAAAAAGCTAAAATAATAGTGGGTTAAACAAAATCATTAATTCTCTTTCTGGGACGTTCTGGGCTTACGTAGACTAGGGCTGTTATAGCAGCCCTCTGCCAATCAGGCACCCAGGCTCCTTCTGCCCAGCTGCTGCGCCTCCTCAATGAGTCACTCCCACACTGTGGTGTAATGTTCCTGCTTTATTTGCTGATGCATTCTAATCACCAGAAAGGGGGAAGGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10401:HG2_PB_SVrefine2Falcon2Bionano_7450:HG3_PB_HySA_22615:HG2_Ill_Krunchall_20347:HG2_PB_assemblyticsPBcR_7987:HG3_Ill_MetaSV_1643:HG2_Ill_tnscope_1652:HG2_Ill_MetaSV_1518:HG4_PB_SVrefine2Falcon1Dovetail_9141:HG3_PB_pbsv_14659:HG3_PB_SVrefine2Falcon1Dovetail_9103:HG3_Ill_manta_3372:HG3_Ill_GATKHCSBGrefine_9868:HG3_10X_allpass_2895:HG2_PB_pbsv_15011:HG2_PB_SVrefine2PBcRplusDovetail_3336:HG2_PB_SVrefine2PB10Xhap12_10848:HG2_Ill_manta_4126:HG2_Ill_breakscan11_2147:HG2_Ill_SpiralSDKrefine_5178:HG2_Ill_SVrefine2DISCOVARplusDovetail_3988:HG2_Ill_GATKHCSBGrefine_9979:HG2_10X_allpass_2368;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10401:HG4_PB_SVrefine2Falcon1Dovetail_9141:HG3_PB_pbsv_14659:HG3_PB_SVrefine2Falcon1Dovetail_9103:HG3_Ill_manta_3372:HG3_Ill_GATKHCSBGrefine_9868:HG3_10X_allpass_2895:HG2_PB_pbsv_15011:HG2_PB_SVrefine2PBcRplusDovetail_3336:HG2_PB_SVrefine2PB10Xhap12_10848:HG2_Ill_manta_4126:HG2_Ill_breakscan11_2147:HG2_Ill_SpiralSDKrefine_5178:HG2_Ill_SVrefine2DISCOVARplusDovetail_3988:HG2_Ill_GATKHCSBGrefine_9979:HG2_10X_allpass_2368;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0124688;ClusterMaxSizeDiff=0.0124688;ClusterMaxEditDist=0.0124688;PBcalls=9;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-401;DistBack=23570;DistForward=-399;DistMin=-399;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=14:88164708-88165111;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1164.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:0:0:1|0:2:13:12:0:1|0:0:27:40:0:0/1:48:26:0/1:29:10:.:.:.
chr14	89408828	HG2_10X_SVrefine210Xhap12_10408	ACCAAAAGCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTATAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAGCCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCG	A	20	PASS	ClusterIDs=HG3_Ill_Spiral_15545:HG3_PB_HySA_22628:HG4_Ill_Krunchall_20672:HG2_Ill_Krunchall_20356:HG4_PB_HySA_21899:HG3_PB_assemblyticsfalcon_8289:HG4_PB_pbsv_14949:HG2_PB_assemblyticsfalcon_8300:HG4_PB_assemblyticsfalcon_8173:HG2_PB_assemblyticsPBcR_7996:HG3_PB_pbsv_14668:HG2_PB_HySA_27361:HG4_Ill_MetaSV_1588:HG2_Ill_tnscope_1653:HG2_Ill_MetaSV_1521:HG4_PB_SVrefine2PBcRDovetail_7465:HG4_PB_SVrefine2Falcon1Dovetail_9149:HG4_Ill_svaba_18694:HG4_Ill_scalpel_13813:HG4_Ill_manta_3520:HG4_Ill_SVrefine2DISCOVARDovetail_10607:HG4_Ill_GATKHCSBGrefine_10332:HG4_10X_allpass_2772:HG3_PB_SVrefine2Falcon1Dovetail_9111:HG3_Ill_svaba_18843:HG3_Ill_scalpel_14411:HG3_Ill_manta_3375:HG3_Ill_SVrefine2DISCOVARDovetail_10757:HG3_Ill_MetaSV_1645:HG3_Ill_GATKHCSBGrefine_9878:HG3_10X_allpass_2898:HG2_PB_pbsv_15018:HG2_PB_SVrefine2PBcRplusDovetail_3342:HG2_PB_SVrefine2PB10Xhap12_10857:HG2_PB_SVrefine2Falcon2Bionano_7457:HG2_PB_SVrefine2Falcon1plusDovetail_3592:HG2_Ill_svaba_18685:HG2_Ill_scalpel_14165:HG2_Ill_manta_4131:HG2_Ill_breakscan11_2149:HG2_Ill_SVrefine2DISCOVARplusDovetail_3993:HG2_Ill_GATKHCSBGrefine_9987:HG2_10X_SVrefine210Xhap12_10408:HG4_Ill_Spiral_1163;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10408:HG2_Ill_GATKHCSBGrefine_9987:HG2_Ill_SVrefine2DISCOVARplusDovetail_3993:HG2_Ill_breakscan11_2149:HG2_Ill_manta_4131:HG2_Ill_scalpel_14165:HG2_Ill_svaba_18685:HG2_PB_SVrefine2Falcon1plusDovetail_3592:HG2_PB_SVrefine2Falcon2Bionano_7457:HG2_PB_SVrefine2PB10Xhap12_10857:HG2_PB_SVrefine2PBcRplusDovetail_3342:HG2_PB_pbsv_15018:HG3_10X_allpass_2898:HG3_Ill_GATKHCSBGrefine_9878:HG3_Ill_MetaSV_1645:HG3_Ill_SVrefine2DISCOVARDovetail_10757:HG3_Ill_manta_3375:HG3_Ill_scalpel_14411:HG3_Ill_svaba_18843:HG3_PB_SVrefine2Falcon1Dovetail_9111:HG4_10X_allpass_2772:HG4_Ill_GATKHCSBGrefine_10332:HG4_Ill_SVrefine2DISCOVARDovetail_10607:HG4_Ill_manta_3520:HG4_Ill_scalpel_13813:HG4_Ill_svaba_18694:HG4_PB_SVrefine2Falcon1Dovetail_9149:HG4_PB_SVrefine2PBcRDovetail_7465;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0770791;ClusterMaxSizeDiff=0.0770791;ClusterMaxEditDist=0.0770791;PBcalls=17;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-250;DistBack=6540;DistForward=-241;DistMin=-241;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=14:89408829-89409088;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1165.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:0:0:1/1:0:23:0:17:1/1:0:20:0:29:1/1:0:33:./.:.:.:.:.:.
chr14	92954762	HG2_10X_SVrefine210Xhap12_10420	CTCTAATTTAGTATGACCTTACCTTAATTTGAGTACATCCTCAGAGACCCTATTTCCAAATAAAGTCACATTCACAGGTTCCAGATGGACATGAATGGGGGCAGGGTACTCAGCCCAGTACAGTGAGTACAAGGAAAGCTGGTGAGCACCGGG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10420:HG4_PB_assemblyticsfalcon_8199:HG2_PB_pbsv_15037:HG3_PB_pbsv_14690:HG4_PB_pbsv_14970:HG2_PB_SVrefine2PB10Xhap12_10866:HG2_PB_SVrefine2Falcon1plusDovetail_3603:HG2_Ill_SVrefine2DISCOVARplusDovetail_4012:HG2_10X_SVrefine210Xhap12_10421:HG4_PB_SVrefine2PBcRDovetail_7478:HG4_PB_SVrefine2Falcon1Dovetail_9162:HG4_Ill_SVrefine2DISCOVARDovetail_10621:HG4_Ill_250bpfermikitraw_19742:HG4_Ill_150bpfermikitraw_19024:HG4_10X_allpass_2773:HG3_PB_SVrefine2PBcRDovetail_7043:HG3_PB_SVrefine2Falcon1Dovetail_9126:HG3_Ill_SVrefine2DISCOVARDovetail_10776:HG3_10X_allpass_2899:HG2_PB_SVrefine2Falcon2Bionano_7465;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10420:HG4_PB_SVrefine2PBcRDovetail_7478:HG4_PB_SVrefine2Falcon1Dovetail_9162:HG4_Ill_SVrefine2DISCOVARDovetail_10621:HG4_Ill_250bpfermikitraw_19742:HG4_Ill_150bpfermikitraw_19024:HG4_10X_allpass_2773:HG3_PB_SVrefine2PBcRDovetail_7043:HG3_PB_SVrefine2Falcon1Dovetail_9126:HG3_Ill_SVrefine2DISCOVARDovetail_10776:HG3_10X_allpass_2899:HG2_PB_SVrefine2Falcon2Bionano_7465;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0199336;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.0332226;PBcalls=11;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-152;DistBack=13554;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=152;REFWIDENED=14:92954763-92955066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1168.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:65:1/1:0:30:1:33:./.:0:2:0:3:1/1:0:28:./.:.:.:.:.:.
chr14	93824178	HG2_Ill_Krunchall_20405	TATGTATATATATGGATATATGGATATATATATGGATATATGGATATATATATGGATATATGGAGATATATATCTATATATATCCATATATATAG	T	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_10625:HG2_PB_pbsv_15045:HG4_PB_SVrefine2Falcon1Dovetail_9169:HG4_PB_assemblyticsfalcon_8208:HG2_PB_assemblyticsfalcon_8346:HG2_PB_SVrefine2Falcon1plusDovetail_3607:HG4_Ill_GATKHC_23905:HG4_Ill_GATKHCSBGrefine_10344:HG3_Ill_GATKHC_23827:HG3_Ill_GATKHCSBGrefine_9891:HG2_Ill_GATKHC_23979:HG2_Ill_GATKHCSBGrefine_10005:HG4_Ill_svaba_18733:HG3_PB_SVrefine2PBcRDovetail_7046:HG4_Ill_scalpel_13835:HG4_Ill_manta_3522:HG4_Ill_Krunchall_20711:HG4_Ill_250bpfermikitraw_19749:HG4_Ill_150bpfermikitraw_19029:HG4_10X_allpass_2774:HG3_Ill_svaba_18888:HG3_Ill_scalpel_14436:HG3_Ill_manta_3380:HG3_Ill_Krunchall_19985:HG3_Ill_250bpfermikitraw_19461:HG3_Ill_150bpfermikitraw_18926:HG2_Ill_svaba_18729:HG2_Ill_scalpel_14194:HG2_Ill_manta_4139:HG2_Ill_SpiralSDKrefine_5213:HG2_Ill_Krunchall_20405:HG2_Ill_250bpfermikitraw_20053:HG2_Ill_150bpfermikitraw_18907:HG3_PB_pbsv_14697:HG4_PB_SVrefine2PBcRDovetail_7482;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18907:HG2_Ill_250bpfermikitraw_20053:HG2_Ill_Krunchall_20405:HG2_Ill_SpiralSDKrefine_5213:HG2_Ill_manta_4139:HG2_Ill_scalpel_14194:HG2_Ill_svaba_18729:HG3_Ill_150bpfermikitraw_18926:HG3_Ill_250bpfermikitraw_19461:HG3_Ill_Krunchall_19985:HG3_Ill_manta_3380:HG3_Ill_scalpel_14436:HG3_Ill_svaba_18888:HG4_10X_allpass_2774:HG4_Ill_150bpfermikitraw_19029:HG4_Ill_250bpfermikitraw_19749:HG4_Ill_Krunchall_20711:HG4_Ill_manta_3522:HG4_Ill_scalpel_13835:HG4_Ill_svaba_18733;NumExactMatchSVs=20;ClusterMaxShiftDist=0.288557;ClusterMaxSizeDiff=0.288557;ClusterMaxEditDist=0.371134;PBcalls=8;Illcalls=26;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-94;DistBack=-4;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=210;REFWIDENED=14:93824025-93824328;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1169.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:57:./.:4:48:0:1:./.:3:17:0:23:1/1:0:34:./.:.:.:.:.:.
chr14	94235337	HG2_PB_assemblyticsfalcon_8351	GCCAGTGATTACAGGTGTGCACCAACACAACTGGCTAAAGATCACTTTTTTAAAAGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10425:HG4_Ill_svaba_18738:HG4_Ill_manta_3523:HG4_Ill_Krunchall_20716:HG4_Ill_GATKHC_23914:HG4_Ill_GATKHCSBGrefine_10347:HG4_Ill_Cortex_1116:HG4_Ill_250bpfermikitraw_19754:HG4_Ill_150bpfermikitraw_19034:HG3_Ill_svaba_18892:HG3_Ill_scalpel_14437:HG3_Ill_manta_3382:HG3_Ill_Krunchall_19988:HG3_Ill_GATKHC_23832:HG3_Ill_GATKHCSBGrefine_9895:HG3_Ill_Cortex_1162:HG3_Ill_250bpfermikitraw_19464:HG3_Ill_150bpfermikitraw_18928:HG3_10X_allpass_2902:HG2_PB_assemblyticsfalcon_8351:HG2_Ill_svaba_18732:HG2_Ill_scalpel_14196:HG2_Ill_manta_4141:HG2_Ill_SpiralSDKrefine_5217:HG2_Ill_Krunchall_20408:HG2_Ill_GATKHC_23986:HG2_Ill_GATKHCSBGrefine_10008:HG2_Ill_Cortex_2721:HG2_Ill_250bpfermikitraw_20056:HG2_Ill_150bpfermikitraw_18911:HG2_Ill_Spiral_995:HG4_PB_pbsv_14981:HG2_PB_pbsv_15049:HG3_PB_pbsv_14702:HG4_PB_SVrefine2PBcRDovetail_7484:HG4_PB_SVrefine2Falcon1Dovetail_9173:HG3_PB_SVrefine2PBcRDovetail_7049:HG3_PB_SVrefine2Falcon1Dovetail_9129:HG2_PB_SVrefine2PBcRplusDovetail_3360:HG2_PB_SVrefine2PB10Xhap12_10873:HG2_PB_SVrefine2Falcon2Bionano_7470;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18911:HG2_Ill_250bpfermikitraw_20056:HG2_Ill_Cortex_2721:HG2_Ill_GATKHCSBGrefine_10008:HG2_Ill_GATKHC_23986:HG2_Ill_Krunchall_20408:HG2_Ill_SpiralSDKrefine_5217:HG2_Ill_manta_4141:HG2_Ill_scalpel_14196:HG2_Ill_svaba_18732:HG2_PB_assemblyticsfalcon_8351:HG3_10X_allpass_2902:HG3_Ill_150bpfermikitraw_18928:HG3_Ill_250bpfermikitraw_19464:HG3_Ill_Cortex_1162:HG3_Ill_GATKHCSBGrefine_9895:HG3_Ill_GATKHC_23832:HG3_Ill_Krunchall_19988:HG3_Ill_manta_3382:HG3_Ill_scalpel_14437:HG3_Ill_svaba_18892:HG4_Ill_150bpfermikitraw_19034:HG4_Ill_250bpfermikitraw_19754:HG4_Ill_Cortex_1116:HG4_Ill_GATKHCSBGrefine_10347:HG4_Ill_GATKHC_23914:HG4_Ill_Krunchall_20716:HG4_Ill_manta_3523:HG4_Ill_svaba_18738;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0530973;PBcalls=11;Illcalls=28;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=27;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=34304;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=55;REFWIDENED=14:94235287-94235397;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1170.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:79:1/1:3:36:0:33:1/1:0:13:0:9:1/1:0:36:./.:.:.:.:.:.
chr14	94267447	HG2_PB_SVrefine2PB10Xhap12_10874	GTGCTGGCTGAGAGACTGGACTTGGAGTCACATGGTCTAGGTTTGAATGACAGCTTC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10426:HG2_PB_pbsv_15050:HG2_PB_assemblyticsPBcR_8047:HG3_Ill_svaba_18893:HG3_Ill_scalpel_14438:HG3_Ill_manta_3383:HG3_Ill_SVrefine2DISCOVARDovetail_10784:HG3_Ill_Krunchall_19989:HG3_Ill_GATKHC_23833:HG3_Ill_GATKHCSBGrefine_9896:HG3_Ill_Cortex_1163:HG3_Ill_250bpfermikitraw_19465:HG3_Ill_150bpfermikitraw_18929:HG3_10X_allpass_2903:HG2_PB_SVrefine2PBcRplusDovetail_3361:HG2_PB_SVrefine2PB10Xhap12_10874:HG2_PB_SVrefine2Falcon2Bionano_7471:HG2_Ill_svaba_18733:HG2_Ill_manta_4142:HG2_Ill_breakscan11_2153:HG2_Ill_SpiralSDKrefine_5218:HG2_Ill_SVrefine2DISCOVARplusDovetail_4016:HG2_Ill_Krunchall_20409:HG2_Ill_GATKHC_23987:HG2_Ill_GATKHCSBGrefine_10009:HG2_Ill_Cortex_2722:HG2_Ill_250bpfermikitraw_20057:HG2_Ill_150bpfermikitraw_18912:HG2_10X_allpass_2370;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10426:HG3_Ill_svaba_18893:HG3_Ill_scalpel_14438:HG3_Ill_manta_3383:HG3_Ill_SVrefine2DISCOVARDovetail_10784:HG3_Ill_Krunchall_19989:HG3_Ill_GATKHC_23833:HG3_Ill_GATKHCSBGrefine_9896:HG3_Ill_Cortex_1163:HG3_Ill_250bpfermikitraw_19465:HG3_Ill_150bpfermikitraw_18929:HG3_10X_allpass_2903:HG2_PB_SVrefine2PBcRplusDovetail_3361:HG2_PB_SVrefine2PB10Xhap12_10874:HG2_PB_SVrefine2Falcon2Bionano_7471:HG2_Ill_svaba_18733:HG2_Ill_manta_4142:HG2_Ill_breakscan11_2153:HG2_Ill_SpiralSDKrefine_5218:HG2_Ill_SVrefine2DISCOVARplusDovetail_4016:HG2_Ill_Krunchall_20409:HG2_Ill_GATKHC_23987:HG2_Ill_GATKHCSBGrefine_10009:HG2_Ill_Cortex_2722:HG2_Ill_250bpfermikitraw_20057:HG2_Ill_150bpfermikitraw_18912:HG2_10X_allpass_2370;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.036036;PBcalls=5;Illcalls=21;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=21;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=32104;DistForward=10802;DistMin=10802;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=14:94267448-94267505;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1171.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:39:1|0:1:31:21:3:1|0:0:14:40:0:0/1:26:20:./.:.:.:.:.:.
chr14	94638738	HG4_10X_allpass_2775	AAGACCACACTGCACAAGGCTAAAATTTGATGCATTAGGCTAAATGAAAATTAAGGATTTCTCCTCCATTGCAGCATAGCAAAGACCAAGCAAACAGGATGCATGAAAGATTGAGAGAAATATTTGCAGTGTTTTTCTAAAACTGACAAAAGATTAATATTTAGAACATATAAGAAACTCAACTGCTTCAATTCATTCAGAAAAAATAATAAAATCCAGCAGAAAATAGGTAAAGGATGTAAATAGATAATTCACAGAAGGAAAACAATCTCGATGGTTCTTAAGTATATGGAAAAATGGTTAACACCACCAATCAAAAAAATACAAATCGAAATTACAATGTGATACTACTTTACTGATTTCAGATTGACATAAATTAGGACATCGGATAATACCAAATGTTAGCATATAAAATGGGAAACGGGTACCTTCCTACCTTCATGTGCCATTGGTGGGTGTGAATGGCAAAGCCATCTGGAGGCCAACATGACAGAGTGAAACCAAACACTGTGGACTTCATGACCCAGCGACTCAATTTCTTATGTTCTGTAAGGGACACGTCTAACATCCATTCCAGCATGGTCTGTGGTAGTAAGGAACTGCTGGCGACCTAACTAGCCGTTATTTGAGGAATTGATAAGTAGAATATGATAGACACACAAATCAAATATTATTATTAGTCATTATTAATGAACTCTTGTTGTATAGTGTCACATGGATAGATCTCTAAGACACTGAGAGAAAAACAAGGAACAGAATGAGTTCTCATCACAATGCCGTTCATATATGTTAAAAACAGACACAAACCATGTATCTTTTGAGGCTGTATACGGTGCATGAACTGGGACATACCTTAATAGAGGAGAGGGTGCATATGGCGGGTAGAAGAATGGGTGTGGAGAAGGAACGAGTAAAAAATAAAAACAAAAAAGAAAAGGGCCTTGCTGACTGACGAGCTGAACAGTACGAACTTGTCCCCAAGGTCCAAAAAAATCGCCCCAATCCCCCTTCCATCTCGTCCCATTCTTAACAGAACCAAGTGCAAGGGACTCAGCGTGGCTGTCCAGAGCAGGGCTTTTCTTCATCAAGGACCTAGGTCCTCTTCCTTCCACCCACCTCGCCACGCCCTCGGTGCCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10428:HG4_PB_pbsv_14982:HG4_Ill_Krunchall_20720:HG2_10X_allpass_2371:HG2_Ill_MetaSV_1528:HG4_PB_SVrefine2PBcRDovetail_7485:HG4_Ill_MetaSV_1594:HG4_Ill_GATKHCSBGrefine_10348:HG4_10X_allpass_2775:HG2_PB_pbsv_15051:HG2_Ill_SpiralSDKrefine_5223:HG2_Ill_GATKHCSBGrefine_10010:HG2_Ill_tnscope_1654:HG4_Ill_SVrefine2DISCOVARDovetail_10628:HG2_PB_SVrefine2PB10Xhap12_10875:HG2_PB_SVrefine2Falcon2Bionano_7472;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10010:HG2_Ill_SpiralSDKrefine_5223:HG2_PB_pbsv_15051:HG4_10X_allpass_2775:HG4_Ill_GATKHCSBGrefine_10348:HG4_Ill_MetaSV_1594:HG4_PB_SVrefine2PBcRDovetail_7485;NumExactMatchSVs=7;ClusterMaxShiftDist=0.177134;ClusterMaxSizeDiff=0.177134;ClusterMaxEditDist=0.177134;PBcalls=5;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1137;DistBack=14540;DistForward=-1136;DistMin=-1136;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=14:94638735-94639877;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1172.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:47:0|1:37:0:2:28:0|1:70:0:0:24:0/1:75:20:0/1:102:42:1126:.:.
chr14	96394033	HG2_Ill_GATKHCSBGrefine_10015	CCTCTCCCTCTCCCTCCATCCCTCTCCCTCCGTCCCTCTCTCCCTCCCCCTTTCCCTCCGTCCCTCTCTCCCTCTCCCTCTCCCTCCATCCCTCTCTCCCTCTCCCTCCATCCCTCTCTCCCTCTCCCTCTCCCTCCGTCCCTCTCTCCCTCTCCCTCTCCCTCTGTCCCTCTCTCCCTCTCCCTCTCCCTCCGTCCCT	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9135:HG3_PB_pbsv_14713:HG2_Ill_SpiralSDKrefine_5232:HG3_PB_HySA_22679:HG2_PB_pbsv_15066:HG4_Ill_GATKHCSBGrefine_10356:HG3_Ill_GATKHCSBGrefine_9900:HG3_Ill_250bpfermikitraw_19486:HG3_Ill_150bpfermikitraw_18948:HG2_Ill_manta_4145:HG2_Ill_GATKHCSBGrefine_10015:HG2_Ill_150bpfermikitraw_18931:HG2_PB_HySA_27434:HG4_PB_pbsv_15000:HG4_PB_SVrefine2PBcRDovetail_7492:HG4_PB_SVrefine2Falcon1Dovetail_9181:HG3_PB_SVrefine2PBcRDovetail_7057:HG2_PB_SVrefine2PBcRplusDovetail_3368:HG2_PB_SVrefine2PB10Xhap12_10883:HG2_PB_SVrefine2Falcon2Bionano_7481:HG2_PB_SVrefine2Falcon1plusDovetail_3617;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18931:HG2_Ill_GATKHCSBGrefine_10015:HG2_Ill_manta_4145:HG3_Ill_150bpfermikitraw_18948:HG3_Ill_250bpfermikitraw_19486:HG3_Ill_GATKHCSBGrefine_9900:HG4_Ill_GATKHCSBGrefine_10356;NumExactMatchSVs=7;ClusterMaxShiftDist=0.190476;ClusterMaxSizeDiff=0.190476;ClusterMaxEditDist=0.199546;PBcalls=13;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-198;DistBack=-297;DistForward=-169;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=600;REFWIDENED=14:96394011-96394808;PctSeqSimilarity=0.7952;PctSizeSimilarity=0.825;PctRecOverlap=0.6846;SizeDiff=-42;StartDistance=-34;EndDistance=-76;GTMatch=0;TruScore=76;MatchId=1173.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:39:./.:1:3:1:17:./.:1:12:9:19:./.:1:9:./.:.:.:.:.:.
chr14	98783980	HG2_PB_SVrefine2PBcRplusDovetail_3376	AATTATGAATTGAAAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATATAGACTGAGAATTTATTGCTAGCAAACCTGCATTGTAAGAAACACTCGAGAAAGTTTTTCAGGATGAAAGGAGATGATATTAGATGTTAACAAGAAAAAAAGAAAAATATCAGGAATTATAAACGTATTAGTCAATATAAAATATGATATGTGTATGCATATATTCTTATATGTGTGTACATATACATATATATTCCTTTATTATTATTTTTTGAGATGGAGTCTGACTCTTGTCACCAGGGCTGGAGTGCAATCCTGTGATCTCAGCTCACTGCAACCTCCACCCCCTAGGTTCAAACGATTCTCCTGCCTCAGCCTCCTGAATAGCTGGGATTACAGGTGTGCACCACCACACTCGGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTCACCATGTTGACCAGACTGGTCTCGAACTCCTGACTTCAGGTGATCTGCCTGCCTCAGTGTCACAAAATGCTGGGATTACAGGCATGAGCCACAGTGCCCGGCCTATTCCTTTATTCTTAATTCTTTAATAAACATGTAATTGTATAAAGCAGTAATTATTACACTATATTGTTGAGTAAGTAGTACATAATTGGGCATTGTCATCTTGTATTTTATCCAGTACGATGATCTCTGCATTTTGACTTGAATGTTAGTCCATTTACATTTAATGTAATTTTTAGTAGGATTGGACTTATGTCTGCCATTTTCCTATTTGTTTTCTATGTGTTTTGTGTGTATTTTTGCTTCTCTTTTACTTTTTTGTATTAAAGAAATATTTTTATTGTACCATTTTAATTCCATTTACATTTAACTATATACTTTAGAATTGTTTTAACTGAGGTGCCATAAGGATATATATATAAATATAATACATATATATGTATGCATATATATTAACTTATTTCAGTCTATTTTAGGTACACATAGACCTAATTACAATAAAATATGGTAACTTTAATACATCTCCAATTCTACTCTCTCATCTCCCTCACGTATGCATGTTTGTATGGGTATACATCTGAATGTGAAAAAATATTTAAACACATGTATGTAACATATAT	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1656:HG3_10X_allpass_2906:HG2_10X_allpass_2373:HG3_PB_assemblyticsfalcon_8374:HG2_PB_assemblyticsfalcon_8392:HG2_PB_assemblyticsPBcR_8090:HG3_Ill_Krunchall_20042:HG2_Ill_breakscan11_2158:HG3_PB_pbsv_14722:HG2_PB_pbsv_15078:HG3_PB_SVrefine2PBcRDovetail_7062:HG3_PB_SVrefine2Falcon1Dovetail_9140:HG3_Ill_SVrefine2DISCOVARDovetail_10799:HG3_Ill_MetaSV_1650:HG3_Ill_GATKHCSBGrefine_9912:HG2_PB_SVrefine2PBcRplusDovetail_3376:HG2_PB_SVrefine2Falcon1plusDovetail_3622:HG2_Ill_SpiralSDKrefine_5245:HG2_Ill_SVrefine2DISCOVARplusDovetail_4030:HG2_Ill_MetaSV_1531:HG2_Ill_GATKHCSBGrefine_10024:HG2_10X_SVrefine210Xhap12_10442;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10442:HG2_Ill_GATKHCSBGrefine_10024:HG2_Ill_MetaSV_1531:HG2_Ill_SVrefine2DISCOVARplusDovetail_4030:HG2_Ill_SpiralSDKrefine_5245:HG2_PB_SVrefine2Falcon1plusDovetail_3622:HG2_PB_SVrefine2PBcRplusDovetail_3376:HG3_Ill_GATKHCSBGrefine_9912:HG3_Ill_MetaSV_1650:HG3_Ill_SVrefine2DISCOVARDovetail_10799:HG3_PB_SVrefine2Falcon1Dovetail_9140:HG3_PB_SVrefine2PBcRDovetail_7062;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0875294;ClusterMaxSizeDiff=0.0875294;ClusterMaxEditDist=0.0875294;PBcalls=9;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1107;DistBack=9164;DistForward=-1057;DistMin=-1057;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=23;REFWIDENED=14:98783981-98785110;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1174.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:53:0|1:28:1:4:42:0|1:97:0:0:30:0/1:47:20:0/1:107:48:1054:.:.
chr14	98822594	HG2_Ill_GATKHCSBGrefine_10026	TCTTCCTTTCTTCCTTTTTTCTTTCCTGCCTGCCTGCCTTCCTTTCCTTCCTTCCTTCCCTCCTTCCACTTTCCCTTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_14723:HG2_PB_pbsv_15079:HG3_PB_assemblyticsfalcon_8376:HG3_PB_HySA_22705:HG3_Ill_svaba_18940:HG3_Ill_scalpel_14480:HG3_Ill_manta_3387:HG3_Ill_Krunchall_20045:HG3_Ill_GATKHC_23893:HG3_Ill_GATKHCSBGrefine_9913:HG3_Ill_250bpfermikitraw_19515:HG3_Ill_150bpfermikitraw_18977:HG3_10X_allpass_2907:HG2_Ill_svaba_18779:HG2_Ill_scalpel_14226:HG2_Ill_SpiralSDKrefine_5247:HG2_Ill_Krunchall_20451:HG2_Ill_GATKHC_24042:HG2_Ill_GATKHCSBGrefine_10026:HG2_Ill_250bpfermikitraw_20106:HG2_Ill_150bpfermikitraw_18957:HG2_10X_allpass_2374:HG3_PB_SVrefine2PBcRDovetail_7063:HG3_Ill_SVrefine2DISCOVARDovetail_10800:HG2_PB_SVrefine2PBcRplusDovetail_3377:HG2_PB_SVrefine2PB10Xhap12_10887:HG2_10X_SVrefine210Xhap12_10443;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_2374:HG2_Ill_150bpfermikitraw_18957:HG2_Ill_250bpfermikitraw_20106:HG2_Ill_GATKHCSBGrefine_10026:HG2_Ill_GATKHC_24042:HG2_Ill_Krunchall_20451:HG2_Ill_SpiralSDKrefine_5247:HG2_Ill_scalpel_14226:HG2_Ill_svaba_18779:HG3_10X_allpass_2907:HG3_Ill_150bpfermikitraw_18977:HG3_Ill_250bpfermikitraw_19515:HG3_Ill_GATKHCSBGrefine_9913:HG3_Ill_GATKHC_23893:HG3_Ill_Krunchall_20045:HG3_Ill_manta_3387:HG3_Ill_scalpel_14480:HG3_Ill_svaba_18940;NumExactMatchSVs=18;ClusterMaxShiftDist=0.025974;ClusterMaxSizeDiff=0.0129032;ClusterMaxEditDist=0.220779;PBcalls=7;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=14;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-77;DistBack=678;DistForward=-70;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=95;REFWIDENED=14:98822591-98822762;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1175.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:44:1|0:0:42:23:1:0|1:24:0:0:20:0/1:27:16:./.:.:.:.:.:.
chr14	100844997	HG4_Ill_manta_3528	GAAGAATGTTCCAGGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_998:HG2_PB_pbsv_15090:HG2_PB_HySA_27479:HG3_Ill_Krunchall_20055:HG2_Ill_Krunchall_20462:HG4_PB_pbsv_15017:HG4_PB_assemblyticsfalcon_8275:HG3_PB_assemblyticsfalcon_8397:HG2_PB_assemblyticsfalcon_8415:HG2_PB_assemblyticsPBcR_8115:HG3_PB_pbsv_14736:HG4_PB_HySA_21985:HG4_Ill_MetaSV_1601:HG2_Ill_tnscope_1657:HG2_Ill_MetaSV_1533:HG4_PB_SVrefine2PBcRDovetail_7499:HG4_PB_SVrefine2Falcon1Dovetail_9190:HG4_Ill_manta_3528:HG4_Ill_SVrefine2DISCOVARDovetail_10651:HG4_Ill_GATKHCSBGrefine_10369:HG4_10X_allpass_2777:HG3_PB_SVrefine2PBcRDovetail_7070:HG3_PB_SVrefine2Falcon1Dovetail_9148:HG3_PB_HySA_22727:HG3_Ill_manta_3389:HG3_Ill_SVrefine2DISCOVARDovetail_10810:HG3_Ill_MetaSV_1652:HG3_Ill_GATKHCSBGrefine_9922:HG3_10X_allpass_2910:HG2_PB_SVrefine2PBcRplusDovetail_3383:HG2_PB_SVrefine2PB10Xhap12_10896:HG2_PB_SVrefine2Falcon1plusDovetail_3629:HG2_Ill_scalpel_14240:HG2_Ill_breakscan11_2160:HG2_Ill_GATKHCSBGrefine_10033:HG2_10X_allpass_2375:HG2_10X_SVrefine210Xhap12_10451:HG4_Ill_Spiral_1166;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10451:HG2_10X_allpass_2375:HG2_Ill_GATKHCSBGrefine_10033:HG2_Ill_breakscan11_2160:HG2_Ill_scalpel_14240:HG2_PB_SVrefine2Falcon1plusDovetail_3629:HG2_PB_SVrefine2PB10Xhap12_10896:HG2_PB_SVrefine2PBcRplusDovetail_3383:HG3_10X_allpass_2910:HG3_Ill_GATKHCSBGrefine_9922:HG3_Ill_MetaSV_1652:HG3_Ill_SVrefine2DISCOVARDovetail_10810:HG3_Ill_manta_3389:HG3_PB_HySA_22727:HG3_PB_SVrefine2Falcon1Dovetail_9148:HG3_PB_SVrefine2PBcRDovetail_7070:HG4_10X_allpass_2777:HG4_Ill_GATKHCSBGrefine_10369:HG4_Ill_SVrefine2DISCOVARDovetail_10651:HG4_Ill_manta_3528:HG4_PB_SVrefine2Falcon1Dovetail_9190:HG4_PB_SVrefine2PBcRDovetail_7499;NumExactMatchSVs=22;ClusterMaxShiftDist=0.101227;ClusterMaxSizeDiff=0.101227;ClusterMaxEditDist=0.101227;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=7212;DistForward=-243;DistMin=-243;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=14:100844998-100845347;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1176.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:39:55:0|1:37:0:0:46:0|1:36:0:0:26:0/1:22:10:./.:30:3:.:.:.
chr14	101172193	HG2_Ill_SVrefine2DISCOVARplusDovetail_4045	GAGAGGACTGAGCAGGCTGTGCACCGGGCTCGGGGCTGCAGCAAGGGGGCCAGAGGACTGAGCAGGCTGTGCACCGGGCTCGGGGCTGCAGCAAGGGGGCCAGAGGACTGAGCAGGCTGTGCACTGGGCTCGGGGCTGCAGCAAGGGGGCCAGAGGACTGAGCAGGCTGTACACCGGGCTCGGGGCTGCAGCAAGGGGGCC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4045:HG4_Ill_Krunchall_20780:HG2_PB_assemblyticsfalcon_8422:HG2_PB_SVrefine2Falcon1plusDovetail_3633:HG2_Ill_SpiralSDKrefine_5260:HG4_PB_pbsv_15022:HG2_PB_pbsv_15096:HG2_10X_SVrefine210Xhap12_10455:HG4_PB_SVrefine2PBcRDovetail_7502:HG4_Ill_SVrefine2DISCOVARDovetail_10656:HG2_PB_SVrefine2PBcRplusDovetail_3388:HG2_PB_SVrefine2PB10Xhap12_10900;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4045:HG4_PB_SVrefine2PBcRDovetail_7502:HG4_Ill_SVrefine2DISCOVARDovetail_10656:HG2_PB_SVrefine2PBcRplusDovetail_3388:HG2_PB_SVrefine2PB10Xhap12_10900;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0246914;ClusterMaxSizeDiff=0.0246914;ClusterMaxEditDist=0.212346;PBcalls=7;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-200;DistBack=11620;DistForward=-185;DistMin=-185;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=102;REFWIDENED=14:101172194-101172495;PctSeqSimilarity=0.9706;PctSizeSimilarity=1;PctRecOverlap=0.7512;SizeDiff=0;StartDistance=-50;EndDistance=-50;GTMatch=0;TruScore=90;MatchId=1177.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:47:0|1:35:4:1:40:./.:4:6:19:0:0/1:29:17:./.:.:.:.:2079:.
chr14	101335543	HG3_Ill_SVrefine2DISCOVARDovetail_10817	GCCGGTGGATGGCAGGAGAGCCTGGGCCAGGGCTGGGGGTGGGGGCGTGGGTGTGGGCATGAGTGCAGAGGAGGGTGAGCTGGTTTCCAGAAGGGCGGGATCAGCTGGGGTGGTGGGCAGGGGGAGGAAGTGCGGGCTCAGCTGAGGTCCTGCTGTGTGGAGCCTGGAGGGAGAGATTGCATGTCCCCTCTCTATTCCCCATGGGTCATCTCAGTAATGGCTGCCGGAGTTCAGGGGTCCCTAGATTGCTCCCAAGGTCCTCACTCCCAAGTCCTTGGCAAGATTCCTGCGCCCCAGGAGCCTTTTGGCACCTGAACTCTGCCACCTAGTCTGCTGGTCAGCCTCTGTGCTGCCCGCGTTGGTGGGTGTCATTGGATTGTTAACGATGTACGTTTTGCTCTAAAATGATGGTGATTGAAGATGGGAATTATTTTGTCAGTTGATTTTAATGTTTTCTTTTTTGTGTGTGAAGTGTTTGTTGTGAAATATCTATTTTGGAAGTTTTTAGGTGTTGGAAAGCCAGAATCTGGGGCCCTCTGGTGTCTAGGAAGAACCTGTGATGCCCTGGGGTGAAGGGATGTGGACTCCCAGGGACAAAACAGTGGACTCTGAGGTCCTCAGGGTCACCTCCCTTTAGGGACTAGAGCACACTCAGTATTCGGGGGCCTCTGTGGTCTTTAAAGATGTCCCATGTTTGCTAAGGAAATGTTACTTTTGCTGGAGGAACTTCTGAAAAATGTTTAGAATTGTTTACCTGCATGTTTTATCTCGTTCAGAATTAGAATTGGTGGCATGTAGATATGCTTCTGGGTCTACCGAGATGAGGCAGGCCTACTGGGTCTCCACCTTCAGCTCAGGACACCCATCATTCACCTGGGAGGGGCTTGCTTCATTAGATGTTCACAAGGCTGAAAAGTGTCCCAGCCTCAAGTGTCACGTGGAGCCTCTTCCACATGCATCGCCAGAAGCGCCTCCTCCCCCATCACTCTGACCCCGCCCCACACAGACGTGTCACACTAGGCTCCTCCTCGAGTCATGTGTCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10456:HG3_PB_pbsv_14742:HG2_PB_HySA_27487:HG4_PB_pbsv_15024:HG2_PB_pbsv_15098:HG3_PB_pbsv_14741:HG4_PB_SVrefine2PBcRDovetail_7503:HG4_PB_SVrefine2Falcon1Dovetail_9195:HG4_Ill_SVrefine2DISCOVARDovetail_10658:HG3_PB_SVrefine2PBcRDovetail_7073:HG3_PB_SVrefine2Falcon1Dovetail_9151:HG3_Ill_SVrefine2DISCOVARDovetail_10817:HG3_Ill_MetaSV_1654:HG2_PB_SVrefine2PBcRplusDovetail_3390:HG2_PB_SVrefine2PB10Xhap12_10902:HG2_PB_SVrefine2Falcon2Bionano_7497:HG2_PB_SVrefine2Falcon1plusDovetail_3636:HG2_Ill_SVrefine2DISCOVARplusDovetail_4047:HG2_Ill_MetaSV_1535;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10456:HG4_PB_SVrefine2PBcRDovetail_7503:HG4_PB_SVrefine2Falcon1Dovetail_9195:HG4_Ill_SVrefine2DISCOVARDovetail_10658:HG3_PB_SVrefine2PBcRDovetail_7073:HG3_PB_SVrefine2Falcon1Dovetail_9151:HG3_Ill_SVrefine2DISCOVARDovetail_10817:HG3_Ill_MetaSV_1654:HG2_PB_SVrefine2PBcRplusDovetail_3390:HG2_PB_SVrefine2PB10Xhap12_10902:HG2_PB_SVrefine2Falcon2Bionano_7497:HG2_PB_SVrefine2Falcon1plusDovetail_3636:HG2_Ill_SVrefine2DISCOVARplusDovetail_4047:HG2_Ill_MetaSV_1535;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00673401;ClusterMaxSizeDiff=0.00673401;ClusterMaxEditDist=0.00963391;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-1042;DistBack=7273;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1043;REFWIDENED=14:101335544-101337628;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1178.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:31:1/1:0:11:0:14:./.:0:0:0:0:./.:3:0:0/1:10:18:.:.:.
chr14	101832409	HG2_Ill_manta_4156	CCCCCAGAATTGCAGCTGAGTGGCTGTGTGACAACCCAAGCGTGACCCCCAGAATTGCAGCTGAGTGGCTGTGTGACAACCCAAGCGTGAT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3395:HG4_Ill_manta_3530:HG4_Ill_Krunchall_20788:HG4_Ill_GATKHCSBGrefine_10376:HG4_Ill_250bpfermikitraw_19823:HG2_Ill_manta_4156:HG2_Ill_GATKHCSBGrefine_10039:HG2_Ill_250bpfermikitraw_20128:HG4_PB_pbsv_15034:HG2_PB_pbsv_15108:HG4_Ill_SVrefine2DISCOVARDovetail_10663;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20128:HG2_Ill_GATKHCSBGrefine_10039:HG2_Ill_manta_4156:HG4_Ill_250bpfermikitraw_19823:HG4_Ill_GATKHCSBGrefine_10376:HG4_Ill_Krunchall_20788:HG4_Ill_manta_3530;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0111111;ClusterMaxSizeDiff=0.0110497;ClusterMaxEditDist=0.0222222;PBcalls=3;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-90;DistBack=-68;DistForward=-46;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=99;REFWIDENED=14:101832387-101832575;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1179.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:31:1|0:0:30:38:1:./.:0:9:9:1:0/1:24:27:./.:.:.:.:.:.
chr14	101990866	HG3_Ill_scalpel_14496	TTTTGCCATTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1658:HG4_PB_assemblyticsfalcon_8296:HG3_PB_assemblyticsfalcon_8415:HG2_Ill_Krunchall_20470:HG2_10X_allpass_2377:HG2_Ill_breakscan11_2163:HG2_PB_pbsv_15110:HG4_PB_SVrefine2Falcon1Dovetail_9201:HG3_PB_pbsv_14751:HG3_PB_SVrefine2PBcRDovetail_7077:HG3_Ill_scalpel_14496:HG3_Ill_manta_3391:HG3_Ill_SVrefine2DISCOVARDovetail_10826:HG3_Ill_GATKHCSBGrefine_9926:HG3_10X_allpass_2912:HG2_PB_SVrefine2Falcon1plusDovetail_3641:HG2_Ill_scalpel_14248:HG2_Ill_manta_4157:HG2_Ill_MetaSV_1536:HG2_Ill_GATKHCSBGrefine_10040:HG2_10X_SVrefine210Xhap12_10461:HG3_PB_SVrefine2Falcon1Dovetail_9156:HG3_Ill_Spiral_15630:HG3_Ill_MetaSV_1655;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10461:HG2_Ill_GATKHCSBGrefine_10040:HG2_Ill_MetaSV_1536:HG2_Ill_manta_4157:HG2_Ill_scalpel_14248:HG2_PB_SVrefine2Falcon1plusDovetail_3641:HG3_10X_allpass_2912:HG3_Ill_GATKHCSBGrefine_9926:HG3_Ill_SVrefine2DISCOVARDovetail_10826:HG3_Ill_manta_3391:HG3_Ill_scalpel_14496:HG3_PB_SVrefine2PBcRDovetail_7077:HG3_PB_pbsv_14751:HG4_PB_SVrefine2Falcon1Dovetail_9201;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0849772;ClusterMaxSizeDiff=0.0849772;ClusterMaxEditDist=0.0849772;PBcalls=8;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=92270;DistForward=-297;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=14:101990867-101991216;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1180.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:0|1:22:0:3:20:0|1:13:1:0:9:0/1:22:21:0/1:34:8:.:.:.
chr14	102248371	HG2_PB_SVrefine2PBcRplusDovetail_3398	TCCCTCCCTCTCTCCCCCTTCTCTCTTTCTCCCTCTCCCACTCCCTCTCTCCCCACCCTTTCTTCCCCTCCCCCCTCCCCCTCCCCCTTCTTCCCCTCCCCCTCCCCATCCCTCTCTCTCCCCTCTCTCTTTTTCCCCCTCCCCCTCCCTCTCTTTCCTCTTTCTCTCTCCCCCTCCCCCTCCCTCTCTCCTCCCTCTCTCTTTCTCCCCCTTCCCCCTCTCTCCCCCCCTTTCTCCCCATTCCCCTCCCTCTCTCCCCCTTCCCCTCCCTCTCTCCCCCTTCCCCTCCCTCTCCCCCTTCCCCTCCCTCTCTCCCCTTCTCTCTCTCTTTCTCCCCTTCCCTCTCTCTCCCCTCTGGCTCTTTCTCCCCTTCCCTCTCTCTCCCCCCCTTTCTCCCCATTCCCCTCCCTCTCTCCCCCTTCCCCTCCCTCTCTCCCCCTTCCGCTCCCTCTCCCCCTTCCCCTCCCTCTCTTTCCTCTTTCTCTCTCCCCCTCCCCCTCCCTCTCTCCTCCCTCTCTCTTTCTCCCCTTCCCTCTCTCTCCCCCCCTTTCTCCCCATTC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3398:HG3_PB_assemblyticsfalcon_8424:HG3_PB_SVrefine2Falcon1Dovetail_9159:HG3_PB_SVrefine2Falcon1Dovetail_9158:HG3_PB_pbsv_14756:HG2_PB_pbsv_15114:HG2_PB_SVrefine2Falcon1plusDovetail_3643:HG3_PB_SVrefine2PBcRDovetail_7079;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_3398:HG3_PB_SVrefine2PBcRDovetail_7079;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0471869;ClusterMaxSizeDiff=0.0326679;ClusterMaxEditDist=0.175884;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-559;DistBack=-243;DistForward=-342;DistMin=-342;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=14:102248372-102248950;PctSeqSimilarity=0.8806;PctSizeSimilarity=0.9696;PctRecOverlap=0.6875;SizeDiff=17;StartDistance=-175;EndDistance=-158;GTMatch=0;TruScore=84;MatchId=1182.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:21:0|1:9:1:4:16:./.:25:2:6:7:0/0:9:0:0/1:11:8:.:.:.
chr14	102390142	HG3_10X_allpass_2914	ACTTTACATTCAGGACTTCTGCAGGTCCTTGAATTTTTCATTAAAGCGAAGGAAAATGTATTTTACATCCATGTCAAAATCAGACATCTGGAATTTGTAAGGCGTTTTTACGCTTACGTTCTT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_1000:HG3_Ill_svaba_18968:HG3_Ill_manta_3394:HG3_Ill_SVrefine2DISCOVARDovetail_10829:HG3_Ill_MetaSV_1657:HG3_Ill_GATKHC_23928:HG3_Ill_GATKHCSBGrefine_9928:HG3_10X_allpass_2914:HG2_Ill_svaba_18814:HG2_Ill_manta_4159:HG2_Ill_SpiralSDKrefine_5269:HG2_Ill_MetaSV_1537:HG2_Ill_GATKHCSBGrefine_10043:HG2_10X_SVrefine210Xhap12_10466:HG3_PB_pbsv_14760:HG2_PB_pbsv_15119:HG2_Ill_breakscan11_2166:HG3_Ill_Spiral_15637;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10466:HG2_Ill_GATKHCSBGrefine_10043:HG2_Ill_MetaSV_1537:HG2_Ill_SpiralSDKrefine_5269:HG2_Ill_manta_4159:HG2_Ill_svaba_18814:HG3_10X_allpass_2914:HG3_Ill_GATKHCSBGrefine_9928:HG3_Ill_GATKHC_23928:HG3_Ill_MetaSV_1657:HG3_Ill_SVrefine2DISCOVARDovetail_10829:HG3_Ill_manta_3394:HG3_Ill_svaba_18968;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0162602;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.0162602;PBcalls=2;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-122;DistBack=1294;DistForward=6431;DistMin=1294;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=14:102390143-102390264;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1183.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:1|0:6:19:23:4:./.:22:0:2:17:0/1:55:16:./.:.:.:.:.:.
chr14	102845967	HG2_PB_assemblyticsPBcR_8152	CTAGTCACACTGCTGAAGATCACCATCTTAAAATCCATGCACAGAGGCATCT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_8152:HG4_PB_HySA_22011:HG4_PB_pbsv_15044:HG4_Ill_GATKHCSBGrefine_10381;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsPBcR_8152:HG4_Ill_GATKHCSBGrefine_10381;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0384615;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=-103;DistForward=13;DistMin=-103;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1074;REFWIDENED=14:102845487-102846611;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1184.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:25:./.:29:4:6:16:./.:0:2:4:1:0/1:12:6:./.:.:.:.:.:.
chr14	103279499	HG4_Ill_250bpfermikitraw_19834	ACGGGGTTTCTCCATGTTGATCAGGCTGGTCTCGAACTCCTGACCTCAGATAATC	A	20	PASS	ClusterIDs=HG2_PB_HySA_27525:HG4_PB_HySA_22013:HG3_PB_HySA_22749:HG4_PB_assemblyticsfalcon_8309:HG3_PB_assemblyticsfalcon_8435:HG2_PB_assemblyticsPBcR_8156:HG4_PB_SVrefine2Falcon1Dovetail_9208:HG4_Ill_svaba_18819:HG4_Ill_scalpel_13889:HG4_Ill_manta_3533:HG4_Ill_Krunchall_20796:HG4_Ill_GATKHC_24010:HG4_Ill_GATKHCSBGrefine_10383:HG4_Ill_250bpfermikitraw_19834:HG4_Ill_150bpfermikitraw_19106:HG4_CG_vcfBeta_9549:HG3_PB_pbsv_14763:HG3_PB_SVrefine2PBcRDovetail_7085:HG3_PB_SVrefine2Falcon1Dovetail_9165:HG3_Ill_svaba_18973:HG3_Ill_manta_3395:HG3_Ill_SVrefine2DISCOVARDovetail_10836:HG3_Ill_Krunchall_20060:HG3_Ill_GATKHC_23931:HG3_Ill_GATKHCSBGrefine_9930:HG3_Ill_FB_12965:HG3_Ill_250bpfermikitraw_19536:HG3_Ill_150bpfermikitraw_19000:HG3_10X_allpass_2915:HG2_PB_pbsv_15122:HG2_PB_SVrefine2PBcRplusDovetail_3403:HG2_PB_SVrefine2Falcon2Bionano_7509:HG2_Ill_svaba_18821:HG2_Ill_scalpel_14255:HG2_Ill_manta_4162:HG2_Ill_Krunchall_20481:HG2_Ill_GATKHC_24088:HG2_Ill_GATKHCSBGrefine_10045:HG2_Ill_250bpfermikitraw_20139:HG2_Ill_150bpfermikitraw_18981:HG2_CG_vcfBeta_8503:HG2_10X_allpass_2378:HG2_10X_SVrefine210Xhap12_10470:HG4_PB_pbsv_15047:HG4_Ill_svaba_18818:HG3_Ill_svaba_18972:HG2_Ill_svaba_18820;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10470:HG2_10X_allpass_2378:HG2_CG_vcfBeta_8503:HG2_Ill_150bpfermikitraw_18981:HG2_Ill_250bpfermikitraw_20139:HG2_Ill_GATKHCSBGrefine_10045:HG2_Ill_GATKHC_24088:HG2_Ill_Krunchall_20481:HG2_Ill_manta_4162:HG2_Ill_scalpel_14255:HG2_Ill_svaba_18821:HG2_PB_SVrefine2Falcon2Bionano_7509:HG2_PB_SVrefine2PBcRplusDovetail_3403:HG2_PB_pbsv_15122:HG3_10X_allpass_2915:HG3_Ill_150bpfermikitraw_19000:HG3_Ill_250bpfermikitraw_19536:HG3_Ill_FB_12965:HG3_Ill_GATKHCSBGrefine_9930:HG3_Ill_GATKHC_23931:HG3_Ill_Krunchall_20060:HG3_Ill_SVrefine2DISCOVARDovetail_10836:HG3_Ill_manta_3395:HG3_Ill_svaba_18973:HG3_PB_SVrefine2Falcon1Dovetail_9165:HG3_PB_SVrefine2PBcRDovetail_7085:HG3_PB_pbsv_14763:HG4_CG_vcfBeta_9549:HG4_Ill_150bpfermikitraw_19106:HG4_Ill_250bpfermikitraw_19834:HG4_Ill_GATKHCSBGrefine_10383:HG4_Ill_GATKHC_24010:HG4_Ill_Krunchall_20796:HG4_Ill_manta_3533:HG4_Ill_scalpel_13889:HG4_Ill_svaba_18819:HG4_PB_SVrefine2Falcon1Dovetail_9208;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0747664;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.148148;PBcalls=14;Illcalls=28;TenXcalls=3;CGcalls=2;PBexactcalls=7;Illexactcalls=25;TenXexactcalls=3;CGexactcalls=2;HG2count=17;HG3count=16;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-54;DistBack=1248;DistForward=7377;DistMin=1248;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=14:103279500-103279555;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:0|1:18:2:3:20:1|0:0:22:31:1:0/1:36:21:./.:.:.:.:.:.
chr14	103598320	HG3_Ill_250bpfermikitraw_19538	AGAGGGGCCGCCTGGGGCTGGGAGGGGCCGCCTGGGGCTGGGAGGGGCCGCCTGGGGCTGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10476:HG3_PB_HySA_22755:HG3_Ill_Spiral_15640:HG2_Ill_Spiral_1001:HG3_PB_pbsv_14766:HG4_PB_pbsv_15050:HG2_Ill_breakscan11_2168:HG4_PB_HySA_22018:HG4_PB_assemblyticsfalcon_8315:HG4_Ill_svaba_18821:HG4_Ill_Krunchall_20799:HG4_Ill_GATKHC_24014:HG4_Ill_GATKHCSBGrefine_10385:HG4_Ill_250bpfermikitraw_19837:HG3_PB_assemblyticsfalcon_8441:HG3_Ill_svaba_18974:HG3_Ill_scalpel_14504:HG3_Ill_Krunchall_20062:HG3_Ill_GATKHC_23934:HG3_Ill_GATKHCSBGrefine_9932:HG3_Ill_250bpfermikitraw_19538:HG3_Ill_150bpfermikitraw_19003:HG2_PB_pbsv_15127:HG2_Ill_svaba_18823:HG2_Ill_manta_4163:HG2_Ill_SpiralSDKrefine_5277:HG2_Ill_Krunchall_20484:HG2_Ill_GATKHC_24092:HG2_Ill_GATKHCSBGrefine_10046:HG2_Ill_250bpfermikitraw_20142:HG2_Ill_150bpfermikitraw_18984:HG4_PB_SVrefine2PBcRDovetail_7512:HG3_Ill_SVrefine2DISCOVARDovetail_10839:HG2_Ill_SVrefine2DISCOVARplusDovetail_4061;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18984:HG2_Ill_250bpfermikitraw_20142:HG2_Ill_GATKHCSBGrefine_10046:HG2_Ill_GATKHC_24092:HG2_Ill_Krunchall_20484:HG2_Ill_SpiralSDKrefine_5277:HG2_Ill_manta_4163:HG2_Ill_svaba_18823:HG2_PB_pbsv_15127:HG3_Ill_150bpfermikitraw_19003:HG3_Ill_250bpfermikitraw_19538:HG3_Ill_GATKHCSBGrefine_9932:HG3_Ill_GATKHC_23934:HG3_Ill_Krunchall_20062:HG3_Ill_scalpel_14504:HG3_Ill_svaba_18974:HG3_PB_assemblyticsfalcon_8441:HG4_Ill_250bpfermikitraw_19837:HG4_Ill_GATKHCSBGrefine_10385:HG4_Ill_GATKHC_24014:HG4_Ill_Krunchall_20799:HG4_Ill_svaba_18821:HG4_PB_assemblyticsfalcon_8315;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0333333;PBcalls=8;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-60;DistBack=12409;DistForward=-59;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=29;REFWIDENED=14:103598317-103598405;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:26:0|1:29:2:1:24:1|0:0:13:15:0:0/1:31:23:./.:.:.:.:.:.
chr14	103764021	HG4_Ill_svaba_18823	TGCGGATGCCACAGGAAGAGGTTTAAAGATGTTTAAAGATGACTTCTGGCCGGGCGCAGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCG	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_20491:HG4_PB_SVrefine2PBcRDovetail_7513:HG4_PB_HySA_22024:HG2_PB_HySA_27543:HG4_PB_pbsv_15053:HG4_Ill_svaba_18823:HG4_Ill_scalpel_13892:HG4_Ill_manta_3534:HG4_Ill_MetaSV_1606:HG4_Ill_GATKHC_24017:HG4_Ill_GATKHCSBGrefine_10386:HG4_CG_vcfBeta_9552:HG4_10X_allpass_2779:HG3_PB_pbsv_14770:HG3_Ill_svaba_18977:HG3_Ill_SVrefine2DISCOVARDovetail_10843:HG3_Ill_MetaSV_1661:HG3_Ill_GATKHC_23940:HG3_Ill_GATKHCSBGrefine_9936:HG3_CG_vcfBeta_8087:HG3_10X_allpass_2917:HG2_PB_pbsv_15132:HG2_PB_assemblyticsfalcon_8464:HG2_PB_assemblyticsPBcR_8168:HG2_PB_SVrefine2PBcRplusDovetail_3407:HG2_PB_SVrefine2PB10Xhap12_10919:HG2_PB_SVrefine2Falcon2Bionano_7513:HG2_PB_SVrefine2Falcon1plusDovetail_3652:HG2_Ill_svaba_18826:HG2_Ill_scalpel_14260:HG2_Ill_manta_4164:HG2_Ill_SpiralSDKrefine_5280:HG2_Ill_SVrefine2DISCOVARplusDovetail_4063:HG2_Ill_MetaSV_1539:HG2_Ill_GATKHC_24101:HG2_Ill_GATKHCSBGrefine_10049:HG2_Ill_150bpfermikitraw_18990:HG2_CG_vcfBeta_8509:HG2_10X_allpass_2379:HG2_10X_SVrefine210Xhap12_10480;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10480:HG2_10X_allpass_2379:HG2_CG_vcfBeta_8509:HG2_Ill_150bpfermikitraw_18990:HG2_Ill_GATKHCSBGrefine_10049:HG2_Ill_GATKHC_24101:HG2_Ill_MetaSV_1539:HG2_Ill_SVrefine2DISCOVARplusDovetail_4063:HG2_Ill_SpiralSDKrefine_5280:HG2_Ill_manta_4164:HG2_Ill_scalpel_14260:HG2_Ill_svaba_18826:HG2_PB_SVrefine2Falcon1plusDovetail_3652:HG2_PB_SVrefine2Falcon2Bionano_7513:HG2_PB_SVrefine2PB10Xhap12_10919:HG2_PB_SVrefine2PBcRplusDovetail_3407:HG2_PB_assemblyticsPBcR_8168:HG2_PB_assemblyticsfalcon_8464:HG2_PB_pbsv_15132:HG3_10X_allpass_2917:HG3_CG_vcfBeta_8087:HG3_Ill_GATKHCSBGrefine_9936:HG3_Ill_GATKHC_23940:HG3_Ill_MetaSV_1661:HG3_Ill_SVrefine2DISCOVARDovetail_10843:HG3_Ill_svaba_18977:HG3_PB_pbsv_14770:HG4_10X_allpass_2779:HG4_CG_vcfBeta_9552:HG4_Ill_GATKHCSBGrefine_10386:HG4_Ill_GATKHC_24017:HG4_Ill_MetaSV_1606:HG4_Ill_manta_3534:HG4_Ill_scalpel_13892:HG4_Ill_svaba_18823:HG4_PB_pbsv_15053;NumExactMatchSVs=36;ClusterMaxShiftDist=0.16129;ClusterMaxSizeDiff=0.16129;ClusterMaxEditDist=0.162602;PBcalls=12;Illcalls=21;TenXcalls=4;CGcalls=3;PBexactcalls=9;Illexactcalls=20;TenXexactcalls=4;CGexactcalls=3;HG2count=21;HG3count=8;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-104;DistBack=4846;DistForward=11161;DistMin=4846;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=14:103764022-103764126;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:3:15:0:25:1/1:0:19:0:10:1/1:0:27:./.:.:.:.:.:.
chr14	104841681	HG2_10X_SVrefine210Xhap12_10489	TGGGTGCGGGAGGAGCCCCTTATAGGACGGGGAGACAGGGTGCGGGAGGAGCCCCTTACAGGACGGGGAGATGGGTGCGGGAGGAGCCCCTTATAGGACGGGGAGACAGGGTGCGGGAGGAGCCCCTTACAGGACGGGGAGAT	CG	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_9182:HG4_PB_SVrefine2Falcon1Dovetail_9227:HG2_PB_assemblyticsfalcon_8491:HG2_PB_SVrefine2Falcon1plusDovetail_3666:HG4_Ill_GATKHC_24035:HG4_Ill_GATKHCSBGrefine_10391:HG2_Ill_GATKHC_24127:HG2_Ill_GATKHCSBGrefine_10057:HG4_10X_allpass_2782:HG4_PB_SVrefine2PBcRDovetail_7523:HG4_Ill_SVrefine2DISCOVARDovetail_10682:HG3_PB_SVrefine2PBcRDovetail_7099:HG3_Ill_manta_3400:HG2_PB_SVrefine2PB10Xhap12_10935:HG2_Ill_SpiralSDKrefine_5290:HG2_Ill_SVrefine2DISCOVARplusDovetail_4070:HG2_10X_SVrefine210Xhap12_10489:HG4_PB_pbsv_15070:HG3_PB_pbsv_14792:HG2_PB_pbsv_15148;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10489:HG2_Ill_SVrefine2DISCOVARplusDovetail_4070:HG2_Ill_SpiralSDKrefine_5290:HG2_PB_SVrefine2PB10Xhap12_10935:HG3_Ill_manta_3400:HG3_PB_SVrefine2PBcRDovetail_7099:HG4_Ill_SVrefine2DISCOVARDovetail_10682:HG4_PB_SVrefine2PBcRDovetail_7523;NumExactMatchSVs=8;ClusterMaxShiftDist=0.070922;ClusterMaxSizeDiff=0.070922;ClusterMaxEditDist=0.328467;PBcalls=10;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-141;DistBack=-85;DistForward=-143;DistMin=-143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=240;REFWIDENED=14:104841529-104841909;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=0.993;SizeDiff=0;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:39:0|1:32:3:1:36:./.:0:16:10:2:0/1:5:19:./.:.:.:.:.:.
chr14	104992534	HG2_PB_SVrefine2Falcon1plusDovetail_3672	ATGTAGAGGCCTACTCCTCACAGCACAGTGTCTAGAGGCAAACTCTACAGCAGTCTATAAACACTCTCGTTCACGTGCCCAGAGAGCGGCACA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2173:HG2_PB_pbsv_15152:HG3_PB_SVrefine2PBcRDovetail_7102:HG3_Ill_SVrefine2DISCOVARDovetail_10849:HG2_PB_SVrefine2PBcRplusDovetail_3422:HG2_PB_SVrefine2PB10Xhap12_10940:HG2_PB_SVrefine2Falcon2Bionano_7529:HG2_PB_SVrefine2Falcon1plusDovetail_3672:HG2_PB_assemblyticsfalcon_8498:HG2_PB_assemblyticsPBcR_8192:HG2_PB_PB10Xdip_9421:HG3_PB_pbsv_14796:HG2_Ill_250bpfermikitraw_20162;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3672:HG2_PB_SVrefine2Falcon2Bionano_7529:HG2_PB_SVrefine2PB10Xhap12_10940:HG2_PB_SVrefine2PBcRplusDovetail_3422:HG3_Ill_SVrefine2DISCOVARDovetail_10849:HG3_PB_SVrefine2PBcRDovetail_7102;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0546448;ClusterMaxSizeDiff=0.0546448;ClusterMaxEditDist=0.10929;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-92;DistBack=-26;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=371;REFWIDENED=14:104992307-104992769;PctSeqSimilarity=0.9946;PctSizeSimilarity=1;PctRecOverlap=0.0108;SizeDiff=0;StartDistance=92;EndDistance=92;GTMatch=0;TruScore=66;MatchId=1190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:27:0|1:16:0:5:26:./.:6:1:0:3:0/1:14:9:./.:.:.:.:.:.
chr14	105506282	HG2_PB_SVrefine2PB10Xhap12_10946	AGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGACCGAGGTGGGCGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGATGAAACCCCATCTCTACTAAAAATACAAAAAAATTAGCTGGGCGTGGTGGCGTGCAACTGTAATCCCAGCTACTTAGGAGGCTGAGGCAGGAGAATCGCTTGAGCCTAGGAGGGAGAGGTTGCAGTGAGCCAAGATCCCACCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAGAAAAGAAAAATTGTATAGATTGTCGTGCACTTGGTTTCTCAAGTCGCCCACCTGGCCCTCTTCCACGTGTGCTTTCCTTCCCTTCATTCCTGTTCCAAAGTTCTTTAATAAACATTCACCCCTGCTCTGAAACTTACCTCAGTTTCTCCTTCTGCTTATGCCCATTGGTCGAATTCTTCTGAGGAGGCAAGAATTGAGGTTGCCACAGACCTGTACGGATTCACTGCCAGTAACTCAGATACCTTTCACCAGTAACATGTCAATGGAAAGAATCAAACTCTGTAAAACATTTGAAGAGATTTATTTTGAGCCAAATATGAGTGACCATGGCCTGTGACACAGCCGTCAGGAGGTCCTGAGAACATGTGCCCAAGGTGGCTGGGGTGCAGCTTGGTTTTATACAATTTAGGGAGACACAGACATCAATCAAACACATTTAAGAAATACATAAGGCCAGCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10502:HG3_10X_allpass_2922:HG2_10X_allpass_2381:HG2_PB_pbsv_15164:HG3_PB_HySA_22807:HG2_PB_HySA_27611:HG3_PB_pbsv_14812:HG3_Ill_GATKHCSBGrefine_9954:HG2_Ill_MetaSV_1543:HG3_Ill_MetaSV_1666:HG4_PB_SVrefine2Falcon1Dovetail_9235:HG3_PB_SVrefine2Falcon1Dovetail_9194:HG2_PB_SVrefine2PB10Xhap12_10946:HG2_PB_SVrefine2Falcon2Bionano_7534:HG2_PB_SVrefine2Falcon1plusDovetail_3677:HG2_Ill_tnscope_1659;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10502:HG4_PB_SVrefine2Falcon1Dovetail_9235:HG3_PB_SVrefine2Falcon1Dovetail_9194:HG2_PB_SVrefine2PB10Xhap12_10946:HG2_PB_SVrefine2Falcon2Bionano_7534:HG2_PB_SVrefine2Falcon1plusDovetail_3677:HG2_Ill_tnscope_1659;NumExactMatchSVs=7;ClusterMaxShiftDist=0.247305;ClusterMaxSizeDiff=0.247305;ClusterMaxEditDist=0.247305;PBcalls=9;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-748;DistBack=6272;DistForward=-711;DistMin=-711;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=289;REFWIDENED=14:105506283-105507319;PctSeqSimilarity=0.9848;PctSizeSimilarity=1;PctRecOverlap=0.98;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=98;MatchId=1191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:49:30:./.:28:20:18:6:./.:51:0:1:14:0/1:45:11:0/1:76:14:.:.:.
chr14	105616234	HG3_PB_HySA_22810	AGGGGGTGGTAGGGAGGTGGGTGGGGGGAGGCAGGGTTGGGGGAGGTGGGGAAGG	A	10	PASS	ClusterIDs=HG3_PB_HySA_22810:HG3_PB_assemblyticsfalcon_8497:HG2_PB_pbsv_15169:HG2_PB_assemblyticsfalcon_8516:HG3_PB_pbsv_14818;NumClusterSVs=5;ExactMatchIDs=HG3_PB_HySA_22810;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.185185;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-54;DistBack=-222;DistForward=11753;DistMin=-222;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=14:105616233-105616292;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.963;PctRecOverlap=0.4364;SizeDiff=2;StartDistance=29;EndDistance=31;GTMatch=0;TruScore=79;MatchId=1192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:23:0|1:16:4:4:19:./.:7:1:3:1:./.:2:0:./.:.:.:.:.:.
chr14	105652603	HG2_PB_SVrefine2Falcon2Bionano_7540	AGTATGTGTGTGTGTGGAGGTGTGTGTGGGGGGCTGTGTGTGGGGGGTGTACATGAGTGTGTGGGGGGTATGTGTGTGAGTGTGGGGGAGTATGTGGGGGGGTGTGTGGGAGTGAATGTGGGG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7540:HG2_PB_assemblyticsfalcon_8519:HG2_PB_SVrefine2Falcon1plusDovetail_3683:HG3_PB_pbsv_14821:HG2_PB_pbsv_15172:HG3_PB_SVrefine2PBcRDovetail_7112;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7540:HG3_PB_SVrefine2PBcRDovetail_7112;NumExactMatchSVs=2;ClusterMaxShiftDist=0.124031;ClusterMaxSizeDiff=0.124031;ClusterMaxEditDist=0.192308;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-122;DistBack=10795;DistForward=5795;DistMin=5795;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=345;REFWIDENED=14:105652604-105653070;PctSeqSimilarity=0.8783;PctSizeSimilarity=0.9918;PctRecOverlap=0.5366;SizeDiff=1;StartDistance=-57;EndDistance=-56;GTMatch=0;TruScore=80;MatchId=1193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:22:2:3:24:0/0:40:2:25:2:./.:3:0:./.:.:.:.:.:.
chr14	107023151	HG3_Ill_GATKHCSBGrefine_9976	GAATTTAAAAAAGTCATGCCAACTGTTCTCTAACTTTTTTAAAAAATGATGAGTCGCCAACCTTCTAAGCTATTTCTAAAAGGCTACAATTACCGTGTTGCCAGTGACAGACAAACGCAAAGGAAGAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10519:HG2_Ill_Krunchall_20541:HG2_PB_assemblyticsPBcR_8242:HG3_Ill_Krunchall_20116:HG2_Ill_Krunchall_20540:HG2_PB_assemblyticsfalcon_8540:HG3_Ill_Spiral_15683:HG2_Ill_Spiral_1003:HG4_PB_assemblyticsfalcon_8395:HG4_PB_SVrefine2Falcon1Dovetail_9260:HG3_PB_pbsv_14863:HG3_Ill_svaba_19052:HG3_Ill_manta_3408:HG3_Ill_SVrefine2DISCOVARDovetail_10877:HG3_Ill_GATKHCSBGrefine_9976:HG3_10X_allpass_2929:HG2_PB_pbsv_15215:HG2_PB_SVrefine2PBcRplusDovetail_3453:HG2_PB_SVrefine2PB10Xhap12_10977:HG2_PB_SVrefine2Falcon2Bionano_7555:HG2_PB_SVrefine2Falcon1plusDovetail_3702:HG2_Ill_svaba_18898:HG2_Ill_breakscan11_2185:HG2_Ill_SpiralSDKrefine_5317:HG2_Ill_SVrefine2DISCOVARplusDovetail_4093:HG2_Ill_GATKHCSBGrefine_10081:HG2_CG_vcfBeta_8525;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10519:HG4_PB_assemblyticsfalcon_8395:HG4_PB_SVrefine2Falcon1Dovetail_9260:HG3_PB_pbsv_14863:HG3_Ill_svaba_19052:HG3_Ill_manta_3408:HG3_Ill_SVrefine2DISCOVARDovetail_10877:HG3_Ill_GATKHCSBGrefine_9976:HG3_10X_allpass_2929:HG2_PB_pbsv_15215:HG2_PB_SVrefine2PBcRplusDovetail_3453:HG2_PB_SVrefine2PB10Xhap12_10977:HG2_PB_SVrefine2Falcon2Bionano_7555:HG2_PB_SVrefine2Falcon1plusDovetail_3702:HG2_Ill_svaba_18898:HG2_Ill_breakscan11_2185:HG2_Ill_SpiralSDKrefine_5317:HG2_Ill_SVrefine2DISCOVARplusDovetail_4093:HG2_Ill_GATKHCSBGrefine_10081:HG2_CG_vcfBeta_8525;NumExactMatchSVs=20;ClusterMaxShiftDist=0.055336;ClusterMaxSizeDiff=0.055336;ClusterMaxEditDist=0.055336;PBcalls=10;Illcalls=14;TenXcalls=2;CGcalls=1;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=1;HG2count=17;HG3count=8;HG4count=2;NumTechs=4;NumTechsExact=4;SVLEN=-127;DistBack=10874;DistForward=2952;DistMin=2952;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=14:107023152-107023282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:13:38:./.:6:28:6:8:./.:1:0:1:33:0/1:7:20:./.:.:.:758179:.:.
chr14	107120051	HG2_PB_pbsv_15217	AGCACACTCTGCTGTTCTGAGCGCCCACTGGTGGTTCTGAGCGCCCCCTGGTGTCCTG	A	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_10708:HG2_PB_PB10Xdip_9523:HG3_PB_pbsv_14866:HG2_PB_pbsv_15217:HG2_PB_SVrefine2PBcRplusDovetail_3454;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_15217;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0677966;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.220339;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-57;DistBack=-234;DistForward=-38;DistMin=-234;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=383;REFWIDENED=14:107119905-107120344;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9828;PctRecOverlap=0.4576;SizeDiff=-1;StartDistance=32;EndDistance=31;GTMatch=0;TruScore=81;MatchId=1195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:45:0|1:29:4:4:41:./.:5:0:2:1:./.:14:1:./.:.:.:.:.:.
chr14	107171543	HG2_Ill_GATKHC_24186	TAAATATAGCTCTCATTCCTTTTTGAGTGATATAAGTGGCCCAGTTTCCATATCCTTCATATTCTCACTATTCAGGTATTTATTATCCTAGAACCCCCCTTAG	T	20	PASS	ClusterIDs=HG3_PB_pbsv_14868:HG3_PB_assemblyticsfalcon_8520:HG4_PB_assemblyticsfalcon_8402:HG2_PB_assemblyticsfalcon_8543:HG2_PB_pbsv_15219:HG4_PB_SVrefine2Falcon1Dovetail_9264:HG3_PB_SVrefine2PBcRDovetail_7124:HG3_PB_SVrefine2Falcon1Dovetail_9222:HG3_Ill_GATKHC_24025:HG3_Ill_GATKHCSBGrefine_9978:HG3_Ill_250bpfermikitraw_19602:HG2_PB_SVrefine2Falcon2Bionano_7558:HG2_PB_SVrefine2Falcon1plusDovetail_3704:HG2_Ill_SVrefine2DISCOVARplusDovetail_4095:HG2_Ill_GATKHC_24186:HG2_Ill_250bpfermikitraw_20210:HG2_10X_SVrefine210Xhap12_10522;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10522:HG2_Ill_250bpfermikitraw_20210:HG2_Ill_GATKHC_24186:HG2_Ill_SVrefine2DISCOVARplusDovetail_4095:HG2_PB_SVrefine2Falcon1plusDovetail_3704:HG2_PB_SVrefine2Falcon2Bionano_7558:HG3_Ill_250bpfermikitraw_19602:HG3_Ill_GATKHCSBGrefine_9978:HG3_Ill_GATKHC_24025:HG3_PB_SVrefine2Falcon1Dovetail_9222:HG3_PB_SVrefine2PBcRDovetail_7124:HG4_PB_SVrefine2Falcon1Dovetail_9264;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0196078;ClusterMaxSizeDiff=0.0196078;ClusterMaxEditDist=0.0490196;PBcalls=10;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-102;DistBack=5546;DistForward=2683;DistMin=2683;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=202;REFWIDENED=14:107171385-107171688;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:25:0|1:33:4:1:17:./.:21:2:1:12:0/1:23:20:./.:.:.:.:.:.
chr15	22511502	HG2_PB_SVrefine2Falcon1plusDovetail_3711	TACACACATGTCCCTAAGCTCACTACCTGGGGACGCCCTCATTCTGTCTCTCAGTCTATTAACAGGGGAGATGGAGCCCAGGAGCCCAGGAGACAGCTACACACACACACACACAAGCACACACACGTCCCTGAGTTCACCACCTGGGGATGCTCTCATTCCGTCTCTCAGTATATTAACGGCAGACAGAGCCCAGGAGATTGACGGCTACACACACACACACACGTGTCCCTGAGCTCACCACCTGGGGATGCACTCATTCCATCTCTATTAACAGGGCAGACAGAGCCCAGGAGATTGGTGGCCACACACACACACACACACACACACACACACAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10532:HG3_PB_HySA_22861:HG3_PB_pbsv_14899:HG3_Ill_GATKHCSBGrefine_9993:HG4_Ill_MetaSV_1630:HG2_PB_HySA_27674:HG2_PB_pbsv_15254:HG4_PB_HySA_22121:HG4_PB_pbsv_15165:HG2_Ill_MetaSV_1561:HG4_PB_SVrefine2PBcRDovetail_7567:HG4_PB_SVrefine2Falcon1Dovetail_9277:HG4_Ill_SVrefine2DISCOVARDovetail_10718:HG3_PB_SVrefine2PBcRDovetail_7138:HG3_PB_SVrefine2Falcon1Dovetail_9238:HG3_Ill_SVrefine2DISCOVARDovetail_10882:HG2_PB_SVrefine2PBcRplusDovetail_3471:HG2_PB_SVrefine2PB10Xhap12_11002:HG2_PB_SVrefine2Falcon1plusDovetail_3711:HG2_Ill_SVrefine2DISCOVARplusDovetail_4103;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10532:HG4_PB_SVrefine2PBcRDovetail_7567:HG4_PB_SVrefine2Falcon1Dovetail_9277:HG4_Ill_SVrefine2DISCOVARDovetail_10718:HG3_PB_SVrefine2PBcRDovetail_7138:HG3_PB_SVrefine2Falcon1Dovetail_9238:HG3_Ill_SVrefine2DISCOVARDovetail_10882:HG2_PB_SVrefine2PBcRplusDovetail_3471:HG2_PB_SVrefine2PB10Xhap12_11002:HG2_PB_SVrefine2Falcon1plusDovetail_3711:HG2_Ill_SVrefine2DISCOVARplusDovetail_4103;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0211161;ClusterMaxSizeDiff=0.0209268;ClusterMaxEditDist=0.0392157;PBcalls=13;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=3659;DistForward=-177;DistMin=-177;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=672;REFWIDENED=15:22511503-22512511;PctSeqSimilarity=0.9664;PctSizeSimilarity=0.9881;PctRecOverlap=0.645;SizeDiff=4;StartDistance=-120;EndDistance=-116;GTMatch=0;TruScore=86;MatchId=1198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:55:1/1:1:36:1:16:0/0:12:0:9:0:0/0:12:0:0/1:10:3:.:.:.
chr15	22908678	HG3_Ill_SVrefine2DISCOVARDovetail_10885	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGATGAGGTTGCGGAGTCTGCTGGTGGGGCCGCCAGT	G	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_10094:HG4_PB_pbsv_15171:HG2_PB_pbsv_15262:HG4_Ill_scalpel_13944:HG4_Ill_SVrefine2DISCOVARDovetail_10720:HG4_Ill_GATKHC_24140:HG4_Ill_GATKHCSBGrefine_10434:HG3_Ill_SVrefine2DISCOVARDovetail_10885:HG2_Ill_scalpel_14317:HG2_Ill_SVrefine2DISCOVARplusDovetail_4105;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10094:HG4_Ill_scalpel_13944:HG4_Ill_SVrefine2DISCOVARDovetail_10720:HG4_Ill_GATKHC_24140:HG4_Ill_GATKHCSBGrefine_10434:HG3_Ill_SVrefine2DISCOVARDovetail_10885:HG2_Ill_scalpel_14317:HG2_Ill_SVrefine2DISCOVARplusDovetail_4105;NumExactMatchSVs=8;ClusterMaxShiftDist=0.18705;ClusterMaxSizeDiff=0.18705;ClusterMaxEditDist=0.18705;PBcalls=2;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-75;DistBack=7559;DistForward=11638;DistMin=7559;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=15:22908679-22908799;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:25:0|1:35:5:4:20:1|0:0:8:30:1:0/1:7:5:./.:.:.:.:.:.
chr15	24107723	HG2_Ill_GATKHCSBGrefine_10102	ATATATATATTATATATATATATATATATATAATATATATATATAAAATATATATTTTATATATATATATATATAATATATATATATAAAATATATATATTATATATATATATTATATATATATATATAAAAAATATATATTTTACAGTGGTGC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_15272:HG2_PB_HySA_27697:HG4_Ill_GATKHC_24161:HG4_Ill_GATKHCSBGrefine_10443:HG4_10X_allpass_2793:HG3_Ill_GATKHCSBGrefine_10000:HG3_CG_vcfBeta_8120:HG3_10X_allpass_2939:HG2_Ill_GATKHC_24246:HG2_Ill_GATKHCSBGrefine_10102:HG2_10X_allpass_2394:HG2_Ill_SpiralSDKrefine_5360:HG2_PB_SVrefine2PB10Xhap12_11016:HG4_Ill_SVrefine2DISCOVARDovetail_10728:HG3_PB_SVrefine2PBcRDovetail_7147:HG3_Ill_manta_3411:HG3_Ill_SVrefine2DISCOVARDovetail_10894:HG2_PB_assemblyticsfalcon_8583:HG2_PB_SVrefine2Falcon1plusDovetail_3718:HG2_Ill_manta_4188:HG2_Ill_SVrefine2DISCOVARplusDovetail_4112:HG2_10X_SVrefine210Xhap12_10541:HG4_PB_HySA_22135:HG3_Ill_MetaSV_1690:HG4_PB_assemblyticsfalcon_8446:HG4_Ill_Spiral_1177:HG3_Ill_Spiral_15719:HG2_Ill_Spiral_1005:HG4_Ill_svaba_18930:HG3_Ill_svaba_19091:HG3_Ill_scalpel_14578:HG3_Ill_250bpfermikitraw_19644:HG3_Ill_150bpfermikitraw_19091:HG2_Ill_svaba_18938:HG3_PB_HySA_22880:HG4_Ill_Krunchall_20896:HG3_Ill_Krunchall_20167:HG2_Ill_Krunchall_20582:HG4_PB_pbsv_15180:HG3_PB_pbsv_14918;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_2394:HG2_Ill_GATKHCSBGrefine_10102:HG2_Ill_GATKHC_24246:HG3_10X_allpass_2939:HG3_CG_vcfBeta_8120:HG3_Ill_GATKHCSBGrefine_10000:HG4_10X_allpass_2793:HG4_Ill_GATKHCSBGrefine_10443:HG4_Ill_GATKHC_24161;NumExactMatchSVs=9;ClusterMaxShiftDist=0.148867;ClusterMaxSizeDiff=0.148867;ClusterMaxEditDist=0.148867;PBcalls=11;Illcalls=24;TenXcalls=4;CGcalls=1;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=1;HG2count=15;HG3count=15;HG4count=10;NumTechs=4;NumTechsExact=3;SVLEN=-153;DistBack=22000;DistForward=-124;DistMin=-124;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=15:24107724-24107876;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:44:0|1:42:4:1:40:1|0:0:23:17:0:0/1:28:16:./.:.:.:.:.:.
chr15	24207057	HG3_Ill_GATKHCSBGrefine_10001	TAAAATTACTCCGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGACGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11017:HG3_PB_HySA_22882:HG3_Ill_Krunchall_20170:HG2_Ill_Krunchall_20583:HG4_PB_assemblyticsfalcon_8447:HG4_Ill_Spiral_1178:HG3_Ill_Spiral_15722:HG4_PB_pbsv_15181:HG3_PB_HySA_22881:HG2_PB_HySA_27698:HG2_PB_PB10Xdip_10469:HG2_PB_PB10Xdip_10468:HG3_Ill_MetaSV_1692:HG2_Ill_tnscope_1665:HG3_PB_assemblyticsfalcon_8560:HG3_PB_SVrefine2PBcRDovetail_7148:HG3_Ill_scalpel_14581:HG3_Ill_manta_3412:HG3_Ill_SVrefine2DISCOVARDovetail_10896:HG3_Ill_GATKHCSBGrefine_10001:HG3_10X_allpass_2940:HG2_PB_pbsv_15273:HG2_PB_assemblyticsfalcon_8584:HG2_PB_assemblyticsPBcR_8293:HG2_PB_SVrefine2PBcRplusDovetail_3480:HG2_PB_SVrefine2PB10Xhap12_11018:HG2_PB_SVrefine2Falcon1plusDovetail_3719:HG2_Ill_manta_4189:HG2_Ill_GATKHCSBGrefine_10103:HG3_PB_pbsv_14919:HG2_Ill_breakscan11_2189;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10103:HG2_Ill_manta_4189:HG2_PB_PB10Xdip_10468:HG3_PB_assemblyticsfalcon_8560:HG3_PB_SVrefine2PBcRDovetail_7148:HG3_Ill_scalpel_14581:HG3_Ill_manta_3412:HG3_Ill_SVrefine2DISCOVARDovetail_10896:HG3_Ill_GATKHCSBGrefine_10001:HG3_10X_allpass_2940:HG2_PB_pbsv_15273:HG2_PB_assemblyticsfalcon_8584:HG2_PB_assemblyticsPBcR_8293:HG2_PB_SVrefine2PBcRplusDovetail_3480:HG2_PB_SVrefine2PB10Xhap12_11018:HG2_PB_SVrefine2Falcon1plusDovetail_3719;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0990991;ClusterMaxSizeDiff=0.0990991;ClusterMaxEditDist=0.110092;PBcalls=17;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=-841;DistForward=-310;DistMin=-841;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=15:24207058-24207377;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1202.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:35:0|1:22:0:2:32:1|0:0:23:33:0:0/1:24:17:0/1:20:11:.:.:.
chr15	25116843	HG3_Ill_SVrefine2DISCOVARDovetail_10899	AGCAAATATTTTGTCTCTTTTTTTTTTGAGACAAAGTCTCGCTCTGTTGCCCAGGCTAGAGTGCAGTGGTGCAATCTTGGCTCACTGCAAGCTCCGCCTCCCCGGTTCACACCATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGACTACAGGCGCCCACCACCACGCCTGGCTAATTTTTTTGTACTTTTAGCAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACTTCATGATTCGCCCACCTCAGCCTCCCAAAGTGCTAGGATTACAGGCGTAAGCCACCACGCCCGGCCTTTTGTCCTCTTTTTAGGGTTGTTTTATACTTCTTGATAGTATATGTTGAATGACAAACATTTTAAAAAATAGATGAATTTATCTATTTTTGCTTCTGTTACTTGTGTTTTTTGTGTTATATCTTAGAAACCATTAATTTCAGACCATGAAGATACATTTTTAAAATAACTTTTTTTTTGAGACATGAGTATCACTTTTGTTGCCCAGGTTGGAGTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGAGGCTAGGATTACAGGTGCCTGCCACCACACTAGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCACCATTTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGATGATCCACCCACCTACCATACCCAGTCAAAAATACATTTTTTTTTGGAAAATATAGTTTAGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTGTGGGAGGCCAAGGCGGGCGGATCACCTGAGGTTGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCTACTAACAATAAAAAAATTAGCTGAGTGTGATGAAACATGCCTGTAATCCCACCTACTTGGCAGGCTGAGACAGCAGAATCGCTTGAACCTGGGAAGCAGAGGTTGTGGTGAGCTGAGATCCCACCATTACACTCCAGCCTGGGCAATAAGAGTGAAACTCCGTCTCGAAAAAAAAAAAAAAAAAAAAAGCTGGGTGCGGTGGCTTACGCCTGTAATCCCAGCACTTTGTGAGGCTGAGGCGGGCGGATCACACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAATAGTTTTCCTCATTGAATTGCCTTGGCAACTTTTGCAATCCATAGACCATAAATGTCAGGGTTAATCTTTGGACAGTCACTTATATTCCATTGACCTATATCACTGTCCTTATGCCAGTACCACAATGTCCTCATTACTATCACTTTATATTGTTTAGAAATCCCATAATCCAACTTTGTTCTGCTTCTCATTACCAGTGTGGTTCTTTTAGATCTCATGAATTTCCATATGAATTTTAGAATCAGCTTACCAATTACTCCCGCCTTGCCCGCAAAAAAAAAGCAACAGGGATTCCCATAGCACAACGACATCACTCTGCTGGACAGCAAGAGGGTGTGTTCAGGAACCATACCTAGTCTACAAAGCCATGGGACTACATACCACAGTCCCAGGGACAACCACAAAATCAAGACTCTTCTTTTGTTTTTGTTTCTTTTTTTTTTTTTTGAAACGGAGTATTGCTCAGTCACCCAGGCTGGAGTGCAATGGCACGATCCCGACTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10544:HG3_Ill_MetaSV_1696:HG3_Ill_GATKHCSBGrefine_10006:HG3_10X_allpass_2941:HG2_Ill_MetaSV_1567:HG3_PB_pbsv_14926:HG2_PB_pbsv_15279:HG4_PB_SVrefine2Falcon1Dovetail_9290:HG3_PB_SVrefine2PBcRDovetail_7153:HG3_PB_SVrefine2Falcon1Dovetail_9251:HG3_Ill_SVrefine2DISCOVARDovetail_10899:HG2_PB_SVrefine2PBcRplusDovetail_3485:HG2_PB_SVrefine2PB10Xhap12_11021:HG2_Ill_SVrefine2DISCOVARplusDovetail_4115;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10544:HG4_PB_SVrefine2Falcon1Dovetail_9290:HG3_PB_SVrefine2PBcRDovetail_7153:HG3_PB_SVrefine2Falcon1Dovetail_9251:HG3_Ill_SVrefine2DISCOVARDovetail_10899:HG2_PB_SVrefine2PBcRplusDovetail_3485:HG2_PB_SVrefine2PB10Xhap12_11021:HG2_Ill_SVrefine2DISCOVARplusDovetail_4115;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00114778;ClusterMaxSizeDiff=0.00114745;ClusterMaxEditDist=0.00172166;PBcalls=7;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-1742;DistBack=23481;DistForward=-1725;DistMin=-1725;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=308;REFWIDENED=15:25116844-25118893;PctSeqSimilarity=0.9933;PctSizeSimilarity=0.9994;PctRecOverlap=0.9151;SizeDiff=-1;StartDistance=-147;EndDistance=-148;GTMatch=0;TruScore=96;MatchId=1203.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:31:0|1:34:3:4:15:./.:42:0:2:10:0/1:50:12:0/1:123:49:1883:.:.
chr15	25126677	HG2_Ill_150bpfermikitraw_19078	AGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	A	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_8456:HG3_Ill_250bpfermikitraw_19654:HG3_Ill_150bpfermikitraw_19104:HG2_Ill_250bpfermikitraw_20252:HG2_Ill_150bpfermikitraw_19079:HG3_Ill_svaba_19101:HG2_Ill_svaba_18947:HG4_Ill_svaba_18940:HG4_Ill_250bpfermikitraw_19942:HG4_Ill_150bpfermikitraw_19200:HG2_Ill_svaba_18946:HG2_Ill_250bpfermikitraw_20251:HG2_Ill_150bpfermikitraw_19078:HG3_Ill_manta_3413:HG2_Ill_manta_4192:HG2_Ill_Spiral_1007:HG3_Ill_Spiral_15731:HG3_Ill_GATKHC_24113:HG3_Ill_GATKHCSBGrefine_10007:HG2_Ill_GATKHC_24260:HG2_Ill_GATKHCSBGrefine_10111:HG4_Ill_Spiral_1180:HG3_PB_HySA_22910:HG3_PB_pbsv_14927:HG3_Ill_Krunchall_20178:HG2_PB_pbsv_15280:HG2_PB_assemblyticsPBcR_8305:HG2_Ill_Krunchall_20593:HG2_PB_HySA_27729:HG4_PB_pbsv_15190:HG4_Ill_Krunchall_20906;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19078:HG2_Ill_250bpfermikitraw_20251:HG2_Ill_svaba_18946:HG4_Ill_150bpfermikitraw_19200:HG4_Ill_250bpfermikitraw_19942:HG4_Ill_svaba_18940;NumExactMatchSVs=6;ClusterMaxShiftDist=0.237288;ClusterMaxSizeDiff=0.237288;ClusterMaxEditDist=0.237288;PBcalls=7;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=-18;DistForward=-31;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=15:25126674-25126764;PctSeqSimilarity=0.9524;PctSizeSimilarity=0.9153;PctRecOverlap=0.9167;SizeDiff=-5;StartDistance=4;EndDistance=-1;GTMatch=0;TruScore=92;MatchId=1204.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:41:1/1:2:22:1:18:./.:0:9:2:6:1/1:1:13:./.:.:.:.:.:.
chr15	25931396	HG3_Ill_manta_3414	GCCTCCAGAAAAACAATTAAGAACATGGAGAACCAGCCTGAGCAACAAAGTGAGACCCTGCCTCTACAAAATTAAAAAAAAAAAAAAATTAGATGTGCGTGGTGACACGCACCTGTAGTCCCAGCTGCTTGGGAGGCTGAGGCTGGAAGATCACTTGAGCCCAGGAAGTTGAGGCTGCAGTAAGCTATGATGGTGCCACTGCACTCCAGCCTGGGAGACAATAGTGACACCCTGTCTCAAAAAATAAAAATAAAATGAACATGAACAACCACTGACAGTTTAGAGCTAGCTAACTGGAGAGTTTTTATACAGAACTGGAAAAAGAATACACCTTTTATTTTATTTTATTTTCAGAAGAGTATAGGATAATCTTGACACTGGAGTTCTGGTGTTTAGCCAGGTAGATTTATGGGACTACCTTGGAAGATCACTTACCCTAAGAGTTTATTTTGTCTCTTTGTTTGTACATTCAGCCAAAAGCAGCAGCAGCCTAGCAACTCCTCAGTAAAATATCTAGAAATCTCTTACAAATGGGGCAGAACTCTGAGACGGCCATGTGGTCCATCCTGCAGGGCTATGGAGGAGCCCATCTGCCAAAGAAGCAGTGAAGAAGGAACGAAGAGTCCAACGTGAAGATCCACATGAAATGACCATGCAGAACCCTCAGAGAGACAGAAATGTCTGCAGCCAATCTGCCCTGGGTGTGGCTTTACAGCAGGGTCACTTTAGCTACAGAATGAGCTCATCCGAGAGGGGTGTGTCTGCTCTGCAAGCCTGGGAGGTGGGAGAGGGTGGGAAGGCCCGAAGGGCACCCCCTTCCTGCTGGGTCTGAGCCTCCCTGACCTAGGGGCTTGCCGCCTGTCACCTGTCCTGGTGTGGGTGTGTCCCAACAGAGGCCATTCAGTATGGGAATCAGAGTGAGGCTAAGTTCCCTTATTCTGATCCCAGACCACAAAGCACACTTGTGCTTATCATTGGATTTTCC	G	20	PASS	ClusterIDs=HG3_PB_pbsv_14936:HG4_PB_SVrefine2Falcon1Dovetail_9294:HG4_Ill_manta_3553:HG4_Ill_GATKHCSBGrefine_10456:HG4_10X_allpass_2796:HG3_Ill_manta_3414:HG3_Ill_GATKHCSBGrefine_10013:HG3_10X_allpass_2942:HG2_PB_pbsv_15290:HG2_PB_assemblyticsPBcR_8318:HG2_PB_SVrefine2PBcRplusDovetail_3490:HG2_PB_SVrefine2PB10Xhap12_11028:HG2_PB_SVrefine2Falcon1plusDovetail_3729:HG2_Ill_manta_4194:HG2_Ill_breakscan11_2192:HG2_Ill_SpiralSDKrefine_5370:HG2_Ill_GATKHCSBGrefine_10118:HG2_10X_allpass_2395:HG2_10X_SVrefine210Xhap12_10549:HG4_Ill_Krunchall_20917:HG3_Ill_Krunchall_20182:HG2_Ill_Krunchall_20599:HG2_PB_assemblyticsPBcR_8317:HG3_PB_assemblyticsfalcon_8579:HG3_PB_SVrefine2Falcon1Dovetail_9254:HG3_Ill_MetaSV_1697:HG2_Ill_tnscope_1666:HG4_PB_pbsv_15197:HG4_PB_assemblyticsfalcon_8463:HG2_PB_assemblyticsfalcon_8610:HG4_Ill_Krunchall_20916:HG2_Ill_MetaSV_1569;NumClusterSVs=32;ExactMatchIDs=HG2_PB_assemblyticsPBcR_8317:HG2_10X_SVrefine210Xhap12_10549:HG2_10X_allpass_2395:HG2_Ill_GATKHCSBGrefine_10118:HG2_Ill_SpiralSDKrefine_5370:HG2_Ill_breakscan11_2192:HG2_Ill_manta_4194:HG2_PB_SVrefine2Falcon1plusDovetail_3729:HG2_PB_SVrefine2PB10Xhap12_11028:HG2_PB_SVrefine2PBcRplusDovetail_3490:HG2_PB_assemblyticsPBcR_8318:HG2_PB_pbsv_15290:HG3_10X_allpass_2942:HG3_Ill_GATKHCSBGrefine_10013:HG3_Ill_manta_3414:HG4_10X_allpass_2796:HG4_Ill_GATKHCSBGrefine_10456:HG4_Ill_manta_3553:HG4_PB_SVrefine2Falcon1Dovetail_9294;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00507872;ClusterMaxSizeDiff=0.00507872;ClusterMaxEditDist=0.00610066;PBcalls=13;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-984;DistBack=23127;DistForward=-984;DistMin=-984;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=15:25931397-25932380;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:36:0|1:33:0:0:32:0|1:29:0:0:37:0/1:58:12:0/1:81:36:1155:.:.
chr15	27483242	HG2_Ill_GATKHC_24302	TCATCTTGAGATTCTGTGTCTCGCAGACAGCAGCGGTGGCAGATTCTTGCTTCTTTTTTTCTTTCATTTCTGTTTCCTATCAGTTATGTGATAAATGAGACGTCA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_20619:HG3_PB_HySA_22954:HG3_Ill_MetaSV_1702:HG4_PB_SVrefine2Falcon1Dovetail_9303:HG3_PB_assemblyticsfalcon_8603:HG3_PB_SVrefine2PBcRDovetail_7164:HG3_PB_SVrefine2Falcon1Dovetail_9262:HG3_Ill_svaba_19126:HG3_Ill_scalpel_14612:HG3_Ill_manta_3416:HG3_Ill_SVrefine2DISCOVARDovetail_10910:HG3_Ill_GATKHC_24145:HG3_Ill_GATKHCSBGrefine_10030:HG3_Ill_Cortex_1194:HG3_Ill_250bpfermikitraw_19681:HG3_Ill_150bpfermikitraw_19129:HG3_CG_vcfBeta_8135:HG3_10X_allpass_2944:HG2_Ill_svaba_18974:HG2_Ill_breakscan11_2194:HG2_Ill_SpiralSDKrefine_5383:HG2_Ill_MetaSV_1576:HG2_Ill_GATKHC_24302:HG2_Ill_GATKHCSBGrefine_10134:HG2_Ill_Cortex_2782:HG2_CG_vcfBeta_8553:HG2_10X_SVrefine210Xhap12_10556:HG3_PB_pbsv_14947:HG2_PB_pbsv_15301:HG2_Ill_Krunchall_20620:HG4_PB_assemblyticsfalcon_8484:HG3_Ill_Krunchall_20206;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10556:HG2_CG_vcfBeta_8553:HG2_Ill_Cortex_2782:HG2_Ill_GATKHCSBGrefine_10134:HG2_Ill_GATKHC_24302:HG2_Ill_MetaSV_1576:HG2_Ill_SpiralSDKrefine_5383:HG2_Ill_breakscan11_2194:HG2_Ill_svaba_18974:HG3_10X_allpass_2944:HG3_CG_vcfBeta_8135:HG3_Ill_150bpfermikitraw_19129:HG3_Ill_250bpfermikitraw_19681:HG3_Ill_Cortex_1194:HG3_Ill_GATKHCSBGrefine_10030:HG3_Ill_GATKHC_24145:HG3_Ill_SVrefine2DISCOVARDovetail_10910:HG3_Ill_manta_3416:HG3_Ill_scalpel_14612:HG3_Ill_svaba_19126:HG3_PB_SVrefine2Falcon1Dovetail_9262:HG3_PB_SVrefine2PBcRDovetail_7164:HG3_PB_assemblyticsfalcon_8603:HG4_PB_SVrefine2Falcon1Dovetail_9303;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0285714;PBcalls=8;Illcalls=20;TenXcalls=2;CGcalls=2;PBexactcalls=4;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=2;HG2count=12;HG3count=18;HG4count=2;NumTechs=4;NumTechsExact=4;SVLEN=-104;DistBack=92491;DistForward=10603;DistMin=10603;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=15:27483243-27483346;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:./.:2:1:6:2:0|1:32:0:0:25:0/1:42:19:./.:.:.:.:.:.
chr15	28159022	HG3_Ill_GATKHC_24158	AAAGAAAGAAAGAAAGAAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGC	A	10	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_10136:HG3_Ill_GATKHC_24158:HG3_Ill_GATKHCSBGrefine_10034:HG2_Ill_GATKHC_24309;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10136:HG3_Ill_GATKHC_24158:HG3_Ill_GATKHCSBGrefine_10034:HG2_Ill_GATKHC_24309;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-52;DistBack=26176;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=89;REFWIDENED=15:28158952-28159092;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:28:./.:4:9:23:16:./.:2:8:1:16:0/1:10:26:./.:.:.:.:.:.
chr15	29411474	HG2_PB_pbsv_15313	TAAGAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAATTAAAAATAAATAAATAAATAAATAAAATAAAATAAAATAATAAAATAATTCACAATTCTAGCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1009:HG4_Ill_Krunchall_20949:HG3_Ill_Krunchall_20222:HG2_Ill_Krunchall_20632:HG4_Ill_Krunchall_20948:HG2_PB_assemblyticsfalcon_8641:HG4_PB_assemblyticsfalcon_8499:HG2_PB_assemblyticsPBcR_8352:HG3_Ill_MetaSV_1709:HG2_Ill_tnscope_1668:HG2_Ill_MetaSV_1584:HG4_PB_SVrefine2PBcRDovetail_7594:HG4_PB_SVrefine2Falcon1Dovetail_9312:HG4_Ill_svaba_18987:HG4_Ill_manta_3558:HG4_Ill_SVrefine2DISCOVARDovetail_10749:HG4_Ill_GATKHCSBGrefine_10471:HG4_10X_allpass_2799:HG3_PB_pbsv_14960:HG3_PB_assemblyticsfalcon_8619:HG3_PB_SVrefine2PBcRDovetail_7171:HG3_PB_SVrefine2Falcon1Dovetail_9273:HG3_Ill_svaba_19149:HG3_Ill_manta_3421:HG3_Ill_SVrefine2DISCOVARDovetail_10916:HG3_Ill_GATKHCSBGrefine_10039:HG3_10X_allpass_2945:HG2_PB_pbsv_15313:HG2_PB_SVrefine2PBcRplusDovetail_3502:HG2_PB_SVrefine2PB10Xhap12_11052:HG2_PB_SVrefine2Falcon2Bionano_7562:HG2_PB_SVrefine2Falcon1plusDovetail_3746:HG2_Ill_svaba_18994:HG2_Ill_manta_4200:HG2_Ill_SVrefine2DISCOVARplusDovetail_4132:HG2_Ill_GATKHCSBGrefine_10140:HG2_10X_allpass_2398:HG2_10X_SVrefine210Xhap12_10564:HG4_PB_pbsv_15216:HG2_Ill_breakscan11_2196:HG4_Ill_Spiral_1182;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10564:HG2_10X_allpass_2398:HG2_Ill_GATKHCSBGrefine_10140:HG2_Ill_SVrefine2DISCOVARplusDovetail_4132:HG2_Ill_manta_4200:HG2_Ill_svaba_18994:HG2_PB_SVrefine2Falcon1plusDovetail_3746:HG2_PB_SVrefine2Falcon2Bionano_7562:HG2_PB_SVrefine2PB10Xhap12_11052:HG2_PB_SVrefine2PBcRplusDovetail_3502:HG2_PB_pbsv_15313:HG3_10X_allpass_2945:HG3_Ill_GATKHCSBGrefine_10039:HG3_Ill_SVrefine2DISCOVARDovetail_10916:HG3_Ill_manta_3421:HG3_Ill_svaba_19149:HG3_PB_SVrefine2Falcon1Dovetail_9273:HG3_PB_SVrefine2PBcRDovetail_7171:HG3_PB_assemblyticsfalcon_8619:HG3_PB_pbsv_14960:HG4_10X_allpass_2799:HG4_Ill_GATKHCSBGrefine_10471:HG4_Ill_SVrefine2DISCOVARDovetail_10749:HG4_Ill_manta_3558:HG4_Ill_svaba_18987:HG4_PB_SVrefine2Falcon1Dovetail_9312:HG4_PB_SVrefine2PBcRDovetail_7594;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.0357143;PBcalls=15;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-422;DistBack=55730;DistForward=11891;DistMin=11891;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=15:29411475-29411904;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1208.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:59:1/1:1:21:0:6:1/1:0:16:0:12:1/1:0:38:0/1:3:12:.:.:.
chr15	29880730	HG3_Ill_150bpfermikitraw_19152	AAGGAAGGAAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAAGGAGAAGGGAGGGAGGGAGGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10567:HG4_PB_assemblyticsfalcon_8506:HG4_Ill_svaba_18990:HG4_Ill_scalpel_13993:HG4_Ill_manta_3559:HG4_Ill_Krunchall_20952:HG4_Ill_GATKHC_24234:HG4_Ill_GATKHCSBGrefine_10472:HG4_Ill_250bpfermikitraw_19991:HG3_PB_assemblyticsfalcon_8625:HG3_Ill_svaba_19153:HG3_Ill_scalpel_14626:HG3_Ill_Krunchall_20226:HG3_Ill_GATKHC_24173:HG3_Ill_GATKHCSBGrefine_10040:HG3_Ill_250bpfermikitraw_19704:HG3_Ill_150bpfermikitraw_19152:HG2_Ill_svaba_18997:HG2_Ill_scalpel_14364:HG2_Ill_manta_4201:HG2_Ill_Krunchall_20635:HG2_Ill_GATKHC_24320:HG2_Ill_GATKHCSBGrefine_10141:HG2_Ill_250bpfermikitraw_20296:HG2_Ill_150bpfermikitraw_19122:HG2_PB_HySA_27801:HG3_PB_HySA_22999:HG2_PB_pbsv_15318:HG4_PB_pbsv_15220:HG2_PB_assemblyticsfalcon_8644:HG3_PB_pbsv_14964:HG3_PB_SVrefine2PBcRDovetail_7174:HG3_Ill_SVrefine2DISCOVARDovetail_10917:HG2_Ill_SVrefine2DISCOVARplusDovetail_4134;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19122:HG2_Ill_250bpfermikitraw_20296:HG2_Ill_GATKHCSBGrefine_10141:HG2_Ill_GATKHC_24320:HG2_Ill_Krunchall_20635:HG2_Ill_manta_4201:HG2_Ill_scalpel_14364:HG2_Ill_svaba_18997:HG3_Ill_150bpfermikitraw_19152:HG3_Ill_250bpfermikitraw_19704:HG3_Ill_GATKHCSBGrefine_10040:HG3_Ill_GATKHC_24173:HG3_Ill_Krunchall_20226:HG3_Ill_scalpel_14626:HG3_Ill_svaba_19153:HG3_PB_assemblyticsfalcon_8625:HG4_Ill_250bpfermikitraw_19991:HG4_Ill_GATKHCSBGrefine_10472:HG4_Ill_GATKHC_24234:HG4_Ill_Krunchall_20952:HG4_Ill_manta_3559:HG4_Ill_scalpel_13993:HG4_Ill_svaba_18990:HG4_PB_assemblyticsfalcon_8506;NumExactMatchSVs=24;ClusterMaxShiftDist=0.241379;ClusterMaxSizeDiff=0.241379;ClusterMaxEditDist=0.243478;PBcalls=9;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-63;DistBack=-64;DistForward=3242;DistMin=-64;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=108;REFWIDENED=15:29880675-29880845;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1209.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:38:./.:11:32:17:5:0|1:26:0:0:20:0/1:23:16:./.:.:.:.:.:.
chr15	32291220	HG4_Ill_GATKHCSBGrefine_10485	TCAGCTCGTGGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2198:HG4_PB_assemblyticsfalcon_8514:HG2_PB_assemblyticsfalcon_8659:HG2_PB_assemblyticsPBcR_8372:HG2_PB_PB10Xdip_10620:HG4_Ill_Krunchall_20968:HG3_Ill_Krunchall_20240:HG2_Ill_Krunchall_20647:HG4_Ill_Spiral_1184:HG3_PB_HySA_23006:HG3_Ill_Spiral_15782:HG2_Ill_Spiral_1010:HG4_PB_pbsv_15230:HG3_PB_pbsv_14973:HG3_Ill_MetaSV_1711:HG2_Ill_tnscope_1669:HG2_Ill_MetaSV_1587:HG4_PB_SVrefine2Falcon1Dovetail_9321:HG4_Ill_scalpel_14005:HG4_Ill_manta_3562:HG4_Ill_GATKHCSBGrefine_10485:HG4_10X_allpass_2801:HG3_Ill_scalpel_14643:HG3_Ill_manta_3423:HG3_Ill_SVrefine2DISCOVARDovetail_10924:HG3_Ill_GATKHCSBGrefine_10047:HG3_10X_allpass_2948:HG2_PB_pbsv_15326:HG2_Ill_scalpel_14377:HG2_Ill_GATKHCSBGrefine_10147:HG2_10X_allpass_2399:HG2_10X_SVrefine210Xhap12_10576;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10576:HG2_10X_allpass_2399:HG2_Ill_GATKHCSBGrefine_10147:HG2_Ill_scalpel_14377:HG2_PB_pbsv_15326:HG3_10X_allpass_2948:HG3_Ill_GATKHCSBGrefine_10047:HG3_Ill_SVrefine2DISCOVARDovetail_10924:HG3_Ill_manta_3423:HG3_Ill_scalpel_14643:HG4_10X_allpass_2801:HG4_Ill_GATKHCSBGrefine_10485:HG4_Ill_manta_3562:HG4_Ill_scalpel_14005:HG4_PB_SVrefine2Falcon1Dovetail_9321;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0960265;ClusterMaxSizeDiff=0.0960265;ClusterMaxEditDist=0.0960265;PBcalls=9;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-308;DistBack=19553;DistForward=44927;DistMin=19553;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=15:32291221-32291543;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:43:0|1:27:1:3:36:1|0:0:34:34:1:0/1:32:20:0/1:40:8:.:.:.
chr15	35009016	HG2_PB_SVrefine2PBcRplusDovetail_3524	ACCAAGCAGTGGCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10584:HG4_Ill_Krunchall_20994:HG2_PB_assemblyticsfalcon_8682:HG2_Ill_Krunchall_20680:HG4_PB_assemblyticsfalcon_8539:HG3_PB_assemblyticsfalcon_8657:HG2_PB_assemblyticsPBcR_8399:HG4_PB_pbsv_15247:HG2_PB_pbsv_15348:HG3_PB_pbsv_14992:HG2_PB_HySA_27872:HG4_PB_HySA_22244:HG4_Ill_MetaSV_1648:HG3_PB_HySA_23041:HG3_Ill_MetaSV_1719:HG2_Ill_tnscope_1672:HG2_Ill_MetaSV_1592:HG4_PB_SVrefine2PBcRDovetail_7605:HG4_PB_SVrefine2Falcon1Dovetail_9340:HG4_Ill_svaba_19019:HG4_Ill_scalpel_14026:HG4_Ill_manta_3568:HG4_Ill_SVrefine2DISCOVARDovetail_10774:HG4_Ill_GATKHCSBGrefine_10503:HG4_10X_allpass_2806:HG3_PB_SVrefine2PBcRDovetail_7189:HG3_PB_SVrefine2Falcon1Dovetail_9290:HG3_Ill_svaba_19182:HG3_Ill_scalpel_14661:HG3_Ill_manta_3428:HG3_Ill_SVrefine2DISCOVARDovetail_10939:HG3_Ill_GATKHCSBGrefine_10062:HG3_10X_allpass_2954:HG2_PB_SVrefine2PBcRplusDovetail_3524:HG2_PB_SVrefine2PB10Xhap12_11077:HG2_PB_SVrefine2Falcon1plusDovetail_3761:HG2_Ill_svaba_19030:HG2_Ill_scalpel_14404:HG2_Ill_manta_4208:HG2_Ill_breakscan11_2201:HG2_Ill_SVrefine2DISCOVARplusDovetail_4152:HG2_Ill_GATKHCSBGrefine_10164:HG2_10X_allpass_2404;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10584:HG4_PB_SVrefine2PBcRDovetail_7605:HG4_PB_SVrefine2Falcon1Dovetail_9340:HG4_Ill_svaba_19019:HG4_Ill_scalpel_14026:HG4_Ill_manta_3568:HG4_Ill_SVrefine2DISCOVARDovetail_10774:HG4_Ill_GATKHCSBGrefine_10503:HG4_10X_allpass_2806:HG3_PB_SVrefine2PBcRDovetail_7189:HG3_PB_SVrefine2Falcon1Dovetail_9290:HG3_Ill_svaba_19182:HG3_Ill_scalpel_14661:HG3_Ill_manta_3428:HG3_Ill_SVrefine2DISCOVARDovetail_10939:HG3_Ill_GATKHCSBGrefine_10062:HG3_10X_allpass_2954:HG2_PB_SVrefine2PBcRplusDovetail_3524:HG2_PB_SVrefine2PB10Xhap12_11077:HG2_PB_SVrefine2Falcon1plusDovetail_3761:HG2_Ill_svaba_19030:HG2_Ill_scalpel_14404:HG2_Ill_manta_4208:HG2_Ill_breakscan11_2201:HG2_Ill_SVrefine2DISCOVARplusDovetail_4152:HG2_Ill_GATKHCSBGrefine_10164:HG2_10X_allpass_2404;NumExactMatchSVs=27;ClusterMaxShiftDist=0.10061;ClusterMaxSizeDiff=0.10061;ClusterMaxEditDist=0.10061;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=29711;DistForward=2398;DistMin=2398;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=15:35009017-35009368;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:74:1/1:1:38:1:28:1/1:0:21:0:14:1/1:0:30:0/1:2:10:.:.:.
chr15	36160130	HG2_PB_pbsv_15349	ATTATAGGTCTTGAACCATCATCCTGTATTCTGCATTAGGTTATGTAAGACTCCTGAATGCCTGTTTAAATGCTCATTTATTGAATTTCCCTTCACCAGATGTGTATTGTCTCAAAGTCTGCAATTCATTCCCTTCATTTTGTGGTTCCTAGTTTGCTTTATCCTCTTACTAATGTCTTTTGTTCTGTCCCAATTAACTGAAATAACTCAATAGTCTTTCAAAAGTTGTGAATACACCCCTCCTAGAAATCTTTTTCCATATTATTAGGCTTTAAATTATTTAAATGTAATTTGTTAGCAGCTTTAATTTTAAAACCTAATTTAGGGTTTTAATAAATAATAACATTTAATATCCATAATGAAGTTTCACCATATATAAAGTATTTAATTTCTTAACACAGCATCTATATTTTCTCATAAAATAACTAACATTAATTGTTGCCGTCCATGTCCCAAACATTGTTCCATGTGCTTCACATGCATTAATTCACTTAGTCCTACAGAATTCCTGTGAGACATGTACTCCTACCAGCACCATGACTGTTTAAAGATGCCATGCCAATGTCAGGAAGTTACCCTATATGGTCTATAAAGGGGAGGCATAAATAATCCAAACCTTGTTTAGCATATAATCAAGAAATAACCATAAAAATGGGCAAACAGCAGCCCTCAAGGCTGCTCCATCTATGGAGTAGCCGTTATTTATTCCTTTGCTTTCTTAATAAACTTGCTTTCACTTTACTCTGTGGACTCACCCTGAATTCTTTCTTGGGGAAGATTTAAGAACCCTCTCTTGGGGTATGGATCGGGGGGACCCCTTTCTGGTAACATTGCTTCGATTTTAGCAGAATTCATGTTTTTCTGATAGGGACTCTTTTCAAACTGATGTCTTAGCCTTCTCAATGCCTCAAGCTAGATCTTGTTCAGACATGTTTTAACAAGTTAATATGAGTTTATTTTGATGTAAAAAATTTTGAAATCCATGCATAGTTTTTTCATAATACACATTTTCCATAAAATTTTGACTCCTTGTATATAACATATAGACATGTTTTATTATAATGCTTGCACAATTTGGTAAAACTGAGGTTCTAGAGTATTATTAAGGATATAATAATTCTGAAAAAGTTTCTTTAATGATATCTTGCCATTTACCTTCAGAAAACAACACCAAATCCTATCTATTCAGGTCATGAGATTTGGCATATTGAGTAGAAAATGATAAAATTGAATTGCAACATACAAGGATGAAGAGGAAATATGTAGTTCTTAATCTTTAAGTCTAGAGTATTTTCTGGAAAGCTCACAGGAAAAATGACTGGACATATTGAAAGACCTCAGGAATCATCTGTGTTAAATTGTTTTTCCTCCAGTTGCTTCCTATAAACCTTGTAATTTAAGAATGACTCTACAGAGGGTCAGGCCACCATTCTAGCAAAGAACAGAGTGATTCACTGAATAGCCCTGATTTCAATTCTTAGTGTGGAATCAATTCTGAGTAGAATCGGAAAAAGCAGAAAAGGGTGGAAAGTAAAGGAACATTTGTAAATGTCAGTTCATGTTGTAGGGGTTGTATCTTCCTTGGGGTTCTCATCACAATTGCCCATCAATTGAATTTGTAGAAAAAAACATGTGACGCCCATGGGAACACATTAGACAGGCAACTGGAACCTCTAAAATGTGGTTTTCACTTTGGATCCTCTAAGCAGGAGACAGACCTAGAATAATGAGCCTGGCCTGCTTTAGGATGGATGCCACCTTTGTCACAAGTTAACTTACAGGTTAACATAATTTATCTTCTGTTATTGCCGGAAAATTGTGGAAAGGGATCTGTTGCTGCTTCTCCTATGATACTATTTAAAAAGTAAATGGTTGGACCTCTGAGATCTGTACTTAGATCTGTTCTGCCTATCCCTACAGATACTACTATCATCAGTTTCCAGGTGAAGAAACTGAGGCTCAGAGAGTGTAAATGATGTGAGCCTATAGCTAATAAATGGTGGATCTGAACTACCAACAAGGTCTACAAACCAAGTAGGTGGTTCCTAGTGTTAGAGGAGCCTTTCAGGTCATGTTTGTCATATTT	A	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_5437:HG2_PB_PB10Xdip_10634:HG2_PB_assemblyticsPBcR_8407:HG4_Ill_Krunchall_21000:HG2_Ill_Krunchall_20686:HG2_Ill_tnscope_1673:HG4_PB_SVrefine2PBcRDovetail_7606:HG4_PB_SVrefine2Falcon1Dovetail_9342:HG4_Ill_MetaSV_1650:HG4_10X_allpass_2807:HG2_PB_pbsv_15349:HG2_PB_SVrefine2PBcRplusDovetail_3525:HG2_PB_SVrefine2PB10Xhap12_11078:HG2_PB_SVrefine2Falcon2Bionano_7579:HG2_PB_SVrefine2Falcon1plusDovetail_3762:HG2_Ill_SVrefine2DISCOVARplusDovetail_4153:HG2_Ill_MetaSV_1593:HG2_10X_allpass_2405:HG2_10X_SVrefine210Xhap12_10586:HG4_PB_pbsv_15250;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10586:HG2_10X_allpass_2405:HG2_Ill_MetaSV_1593:HG2_Ill_SVrefine2DISCOVARplusDovetail_4153:HG2_PB_SVrefine2Falcon1plusDovetail_3762:HG2_PB_SVrefine2Falcon2Bionano_7579:HG2_PB_SVrefine2PB10Xhap12_11078:HG2_PB_SVrefine2PBcRplusDovetail_3525:HG2_PB_pbsv_15349:HG4_10X_allpass_2807:HG4_Ill_MetaSV_1650:HG4_PB_SVrefine2Falcon1Dovetail_9342:HG4_PB_SVrefine2PBcRDovetail_7606;NumExactMatchSVs=13;ClusterMaxShiftDist=0.020783;ClusterMaxSizeDiff=0.020783;ClusterMaxEditDist=0.020783;PBcalls=10;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2085;DistBack=4806;DistForward=-2059;DistMin=-2059;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=15:36160131-36162219;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:45:0|1:36:0:1:30:0|1:62:0:0:29:0/1:52:12:0/1:175:72:2069:.:.
chr15	36954641	HG4_Ill_Krunchall_21011	CCAGTATGCTAGGCCATCAAAAGATGGTACAATCATCTTCAAAACCTGAGTTT	C	20	PASS	ClusterIDs=HG4_PB_HySA_22260:HG2_PB_HySA_27886:HG2_PB_pbsv_15353:HG4_PB_pbsv_15255:HG3_PB_pbsv_14996:HG4_PB_SVrefine2PBcRDovetail_7609:HG4_PB_SVrefine2Falcon1Dovetail_9345:HG4_Ill_svaba_19037:HG4_Ill_scalpel_14040:HG4_Ill_manta_3570:HG4_Ill_SVrefine2DISCOVARDovetail_10780:HG4_Ill_Krunchall_21011:HG4_Ill_GATKHCSBGrefine_10511:HG4_Ill_250bpfermikitraw_20035:HG4_Ill_150bpfermikitraw_19297:HG3_PB_SVrefine2PBcRDovetail_7191:HG3_PB_SVrefine2Falcon1Dovetail_9293:HG3_PB_HySA_23052:HG3_Ill_svaba_19198:HG3_Ill_scalpel_14676:HG3_Ill_manta_3429:HG3_Ill_SVrefine2DISCOVARDovetail_10944:HG3_Ill_Krunchall_20286:HG3_Ill_GATKHCSBGrefine_10067:HG3_Ill_250bpfermikitraw_19751:HG3_Ill_150bpfermikitraw_19203:HG2_PB_SVrefine2PBcRplusDovetail_3528:HG2_PB_SVrefine2PB10Xhap12_11081:HG2_PB_SVrefine2Falcon2Bionano_7583:HG2_PB_SVrefine2Falcon1plusDovetail_3765:HG2_Ill_svaba_19047:HG2_Ill_scalpel_14416:HG2_Ill_manta_4210:HG2_Ill_SpiralSDKrefine_5444:HG2_Ill_SVrefine2DISCOVARplusDovetail_4155:HG2_Ill_Krunchall_20696:HG2_Ill_GATKHCSBGrefine_10170:HG2_Ill_250bpfermikitraw_20347:HG2_Ill_150bpfermikitraw_19178:HG2_10X_SVrefine210Xhap12_10591;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10591:HG2_Ill_150bpfermikitraw_19178:HG2_Ill_250bpfermikitraw_20347:HG2_Ill_GATKHCSBGrefine_10170:HG2_Ill_Krunchall_20696:HG2_Ill_SVrefine2DISCOVARplusDovetail_4155:HG2_Ill_SpiralSDKrefine_5444:HG2_Ill_manta_4210:HG2_Ill_scalpel_14416:HG2_Ill_svaba_19047:HG2_PB_SVrefine2Falcon1plusDovetail_3765:HG2_PB_SVrefine2Falcon2Bionano_7583:HG2_PB_SVrefine2PB10Xhap12_11081:HG2_PB_SVrefine2PBcRplusDovetail_3528:HG3_Ill_150bpfermikitraw_19203:HG3_Ill_250bpfermikitraw_19751:HG3_Ill_GATKHCSBGrefine_10067:HG3_Ill_Krunchall_20286:HG3_Ill_SVrefine2DISCOVARDovetail_10944:HG3_Ill_manta_3429:HG3_Ill_scalpel_14676:HG3_Ill_svaba_19198:HG3_PB_HySA_23052:HG3_PB_SVrefine2Falcon1Dovetail_9293:HG3_PB_SVrefine2PBcRDovetail_7191:HG4_Ill_150bpfermikitraw_19297:HG4_Ill_250bpfermikitraw_20035:HG4_Ill_GATKHCSBGrefine_10511:HG4_Ill_Krunchall_21011:HG4_Ill_SVrefine2DISCOVARDovetail_10780:HG4_Ill_manta_3570:HG4_Ill_scalpel_14040:HG4_Ill_svaba_19037:HG4_PB_SVrefine2Falcon1Dovetail_9345:HG4_PB_SVrefine2PBcRDovetail_7609;NumExactMatchSVs=35;ClusterMaxShiftDist=0.0560748;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.0560748;PBcalls=14;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=12013;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=15:36954642-36954745;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1213.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:76:1/1:2:26:0:16:1/1:0:12:0:11:1/1:0:35:./.:.:.:.:.:.
chr15	37544733	HG2_PB_assemblyticsPBcR_8419	GTTTTATAAAAAATCTCTTTTCTTTTCCTTTCTTCTTTTTCTTTTTTTTTTTTTTTTTTTTT	G	20	PASS	ClusterIDs=HG3_PB_HySA_23059:HG3_PB_assemblyticsfalcon_8675:HG2_Ill_Spiral_1011:HG4_PB_SVrefine2PBcRDovetail_7610:HG4_Ill_svaba_19041:HG4_Ill_scalpel_14044:HG4_Ill_manta_3571:HG4_Ill_Krunchall_21016:HG4_Ill_GATKHC_24313:HG4_Ill_GATKHCSBGrefine_10514:HG4_Ill_250bpfermikitraw_20039:HG4_Ill_150bpfermikitraw_19301:HG3_Ill_svaba_19203:HG3_Ill_scalpel_14682:HG3_Ill_manta_3430:HG3_Ill_Krunchall_20291:HG3_Ill_GATKHC_24254:HG3_Ill_GATKHCSBGrefine_10070:HG3_Ill_250bpfermikitraw_19757:HG3_Ill_150bpfermikitraw_19211:HG3_CG_vcfBeta_8172:HG3_10X_allpass_2956:HG2_PB_assemblyticsPBcR_8419:HG2_PB_HySA_27892:HG2_Ill_svaba_19052:HG2_Ill_scalpel_14422:HG2_Ill_manta_4211:HG2_Ill_SpiralSDKrefine_5448:HG2_Ill_Krunchall_20702:HG2_Ill_GATKHC_24402:HG2_Ill_GATKHCSBGrefine_10174:HG2_Ill_250bpfermikitraw_20352:HG2_Ill_150bpfermikitraw_19183:HG2_CG_vcfBeta_8594:HG2_10X_allpass_2406:HG2_PB_assemblyticsfalcon_8700:HG4_PB_pbsv_15257:HG4_PB_assemblyticsfalcon_8557:HG3_PB_pbsv_14997:HG2_PB_pbsv_15355;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_2406:HG2_CG_vcfBeta_8594:HG2_Ill_150bpfermikitraw_19183:HG2_Ill_250bpfermikitraw_20352:HG2_Ill_GATKHCSBGrefine_10174:HG2_Ill_GATKHC_24402:HG2_Ill_Krunchall_20702:HG2_Ill_SpiralSDKrefine_5448:HG2_Ill_manta_4211:HG2_Ill_scalpel_14422:HG2_Ill_svaba_19052:HG2_PB_HySA_27892:HG2_PB_assemblyticsPBcR_8419:HG3_10X_allpass_2956:HG3_CG_vcfBeta_8172:HG3_Ill_150bpfermikitraw_19211:HG3_Ill_250bpfermikitraw_19757:HG3_Ill_GATKHCSBGrefine_10070:HG3_Ill_GATKHC_24254:HG3_Ill_Krunchall_20291:HG3_Ill_manta_3430:HG3_Ill_scalpel_14682:HG3_Ill_svaba_19203:HG4_Ill_150bpfermikitraw_19301:HG4_Ill_250bpfermikitraw_20039:HG4_Ill_GATKHCSBGrefine_10514:HG4_Ill_GATKHC_24313:HG4_Ill_Krunchall_21016:HG4_Ill_manta_3571:HG4_Ill_scalpel_14044:HG4_Ill_svaba_19041:HG4_PB_SVrefine2PBcRDovetail_7610;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.132231;PBcalls=10;Illcalls=26;TenXcalls=2;CGcalls=2;PBexactcalls=3;Illexactcalls=25;TenXexactcalls=2;CGexactcalls=2;HG2count=16;HG3count=13;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-61;DistBack=9107;DistForward=66835;DistMin=9107;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=15:37544734-37544798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:15:52:./.:0:2:0:3:1/1:0:18:0:15:1/1:0:45:./.:.:.:.:.:.
chr15	38156364	HG2_Ill_250bpfermikitraw_20356	ACTCTGTGTCTAGCTAAAGGTTTGTAAACGCACCAATCAGCACTCTGTAAAAATGCACCAATCAACG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_15357:HG4_PB_pbsv_15259:HG3_PB_pbsv_14999:HG4_PB_assemblyticsfalcon_8560:HG4_Ill_scalpel_14046:HG4_Ill_GATKHCSBGrefine_10515:HG4_Ill_250bpfermikitraw_20040:HG4_Ill_150bpfermikitraw_19302:HG3_Ill_scalpel_14684:HG3_Ill_250bpfermikitraw_19760:HG2_PB_assemblyticsfalcon_8704:HG2_PB_assemblyticsPBcR_8423:HG2_Ill_scalpel_14424:HG2_Ill_GATKHCSBGrefine_10175:HG2_Ill_250bpfermikitraw_20356;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20356:HG2_Ill_GATKHCSBGrefine_10175:HG2_Ill_scalpel_14424:HG2_PB_assemblyticsPBcR_8423:HG2_PB_assemblyticsfalcon_8704:HG3_Ill_250bpfermikitraw_19760:HG3_Ill_scalpel_14684:HG4_Ill_150bpfermikitraw_19302:HG4_Ill_250bpfermikitraw_20040:HG4_Ill_GATKHCSBGrefine_10515:HG4_Ill_scalpel_14046;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0451128;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.0601504;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=6914;DistForward=54619;DistMin=6914;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=281;REFWIDENED=15:38156353-38156699;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1215.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:44:0|1:36:4:1:38:./.:0:8:22:2:0/1:25:20:./.:.:.:.:.:.
chr15	39267004	HG2_PB_SVrefine2Falcon2Bionano_7586	AGAAAAATTTATTATTATTATTATTATTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCGGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG4_Ill_Spiral_1187:HG4_PB_assemblyticsfalcon_8564:HG2_10X_allpass_2408:HG4_PB_pbsv_15260:HG4_Ill_Krunchall_21030:HG3_Ill_Krunchall_20303:HG2_PB_pbsv_15358:HG2_Ill_Krunchall_20713:HG2_PB_assemblyticsPBcR_8428:HG3_PB_assemblyticsfalcon_8682:HG2_PB_assemblyticsfalcon_8709:HG2_PB_HySA_27905:HG2_Ill_Spiral_1012:HG3_PB_pbsv_15001:HG4_Ill_MetaSV_1656:HG2_Ill_tnscope_1674:HG2_Ill_MetaSV_1596:HG4_PB_SVrefine2PBcRDovetail_7611:HG4_PB_SVrefine2Falcon1Dovetail_9347:HG4_Ill_scalpel_14052:HG4_Ill_SVrefine2DISCOVARDovetail_10785:HG4_Ill_GATKHCSBGrefine_10517:HG4_10X_allpass_2808:HG3_PB_SVrefine2Falcon1Dovetail_9295:HG3_Ill_SVrefine2DISCOVARDovetail_10956:HG3_Ill_MetaSV_1721:HG3_Ill_GATKHCSBGrefine_10071:HG3_10X_allpass_2957:HG2_PB_SVrefine2PBcRplusDovetail_3531:HG2_PB_SVrefine2PB10Xhap12_11084:HG2_PB_SVrefine2Falcon2Bionano_7586:HG2_PB_SVrefine2Falcon1plusDovetail_3768:HG2_Ill_scalpel_14430:HG2_Ill_manta_4212:HG2_Ill_SVrefine2DISCOVARplusDovetail_4162:HG2_Ill_GATKHCSBGrefine_10177:HG2_10X_SVrefine210Xhap12_10598:HG2_Ill_breakscan11_2202:HG3_Ill_Spiral_15827;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10598:HG2_Ill_GATKHCSBGrefine_10177:HG2_Ill_SVrefine2DISCOVARplusDovetail_4162:HG2_Ill_manta_4212:HG2_Ill_scalpel_14430:HG2_PB_SVrefine2Falcon1plusDovetail_3768:HG2_PB_SVrefine2Falcon2Bionano_7586:HG2_PB_SVrefine2PB10Xhap12_11084:HG2_PB_SVrefine2PBcRplusDovetail_3531:HG3_10X_allpass_2957:HG3_Ill_GATKHCSBGrefine_10071:HG3_Ill_MetaSV_1721:HG3_Ill_SVrefine2DISCOVARDovetail_10956:HG3_PB_SVrefine2Falcon1Dovetail_9295:HG4_10X_allpass_2808:HG4_Ill_GATKHCSBGrefine_10517:HG4_Ill_SVrefine2DISCOVARDovetail_10785:HG4_Ill_scalpel_14052:HG4_PB_SVrefine2Falcon1Dovetail_9347:HG4_PB_SVrefine2PBcRDovetail_7611;NumExactMatchSVs=20;ClusterMaxShiftDist=0.109668;ClusterMaxSizeDiff=0.109668;ClusterMaxEditDist=0.109668;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-354;DistBack=8266;DistForward=14284;DistMin=8266;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=15:39267005-39267370;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:78:1/1:3:37:2:30:1/1:0:31:0:34:1/1:0:41:0/1:2:17:.:.:.
chr15	39744390	HG3_Ill_svaba_19209	AAAAATCCCTTTTCTCCTCCCAGGGCAGGATTACTAGTATCTACTATTGAGAAATCCATCTTCAGGTCAGAAATGTCCATCATCCAATGTTGATTGAGCAACAAAGTGTGAAGGGTCTTTTGCCAAGCCCTAGGCACCAGACACTGTAGAATCTCTTAGTGAGATTCTAAATTCACCCAGGCTAGACATGATTGTCTTCCAATTTTGGCCATGATTGATAAAAGAGAAAAATCAGTGGAAAAGCCAGAAATGTGAAAAGAATTTGACACTTCTGAAAGCTATTTGTTTGGGTTTGGTTTCTATTGGATGTAGAAATCAAAATCTCAAATAAAATTTTACTTGACCTGTATCTTATCTATATTTTACTTGGTCTATACCCAATAGTTTCTAGATCAAATTAATTAATGATGACCAAGAAAATTTCCATTTAGGTTTTCACTCACTATAATGGGAGCTAACACAGAGCAGGG	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1675:HG4_PB_assemblyticsfalcon_8567:HG2_PB_assemblyticsPBcR_8432:HG4_Ill_Krunchall_21033:HG3_Ill_Krunchall_20307:HG2_Ill_Krunchall_20715:HG3_PB_assemblyticsfalcon_8686:HG2_PB_assemblyticsfalcon_8713:HG4_Ill_svaba_19048:HG4_Ill_manta_3572:HG4_Ill_GATKHCSBGrefine_10519:HG4_Ill_Cortex_1156:HG4_10X_allpass_2809:HG3_Ill_svaba_19209:HG3_Ill_manta_3431:HG3_Ill_GATKHCSBGrefine_10076:HG3_Ill_Cortex_1203:HG3_10X_allpass_2960:HG2_Ill_svaba_19058:HG2_Ill_manta_4213:HG2_Ill_SpiralSDKrefine_5454:HG2_Ill_SVrefine2DISCOVARplusDovetail_4164:HG2_Ill_GATKHCSBGrefine_10179:HG2_Ill_Cortex_2818:HG2_10X_allpass_2409:HG2_Ill_breakscan11_2203:HG4_Ill_MetaSV_1658:HG3_Ill_Spiral_15830:HG3_Ill_MetaSV_1725:HG2_Ill_Spiral_1013:HG2_Ill_MetaSV_1598:HG4_PB_pbsv_15262:HG4_PB_SVrefine2PBcRDovetail_7613:HG4_PB_SVrefine2Falcon1Dovetail_9351:HG4_Ill_SVrefine2DISCOVARDovetail_10788:HG3_PB_pbsv_15005:HG3_PB_SVrefine2PBcRDovetail_7196:HG3_PB_SVrefine2Falcon1Dovetail_9299:HG3_Ill_SVrefine2DISCOVARDovetail_10958:HG2_PB_pbsv_15360:HG2_PB_SVrefine2PBcRplusDovetail_3533:HG2_PB_SVrefine2PB10Xhap12_11086:HG2_PB_SVrefine2Falcon2Bionano_7588:HG2_PB_SVrefine2Falcon1plusDovetail_3770:HG2_Ill_SVrefine2DISCOVARplusDovetail_4163:HG2_10X_SVrefine210Xhap12_10601;NumClusterSVs=46;ExactMatchIDs=HG2_10X_allpass_2409:HG2_Ill_Cortex_2818:HG2_Ill_GATKHCSBGrefine_10179:HG2_Ill_SVrefine2DISCOVARplusDovetail_4164:HG2_Ill_SpiralSDKrefine_5454:HG2_Ill_manta_4213:HG2_Ill_svaba_19058:HG3_10X_allpass_2960:HG3_Ill_Cortex_1203:HG3_Ill_GATKHCSBGrefine_10076:HG3_Ill_manta_3431:HG3_Ill_svaba_19209:HG4_10X_allpass_2809:HG4_Ill_Cortex_1156:HG4_Ill_GATKHCSBGrefine_10519:HG4_Ill_manta_3572:HG4_Ill_svaba_19048;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0408602;ClusterMaxSizeDiff=0.0408602;ClusterMaxEditDist=0.0408602;PBcalls=15;Illcalls=27;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-469;DistBack=14910;DistForward=-469;DistMin=-469;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=15:39744391-39744860;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1217.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:66:1/1:0:7:0:5:1/1:0:17:0:13:1/1:0:57:0/1:3:18:.:.:.
chr15	40896391	HG2_Ill_GATKHCSBGrefine_10182	TCCTATCTCTTCAATTTAAGGATGAGAAAATTGAGAACCAGGAAAATTGAGAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10607:HG4_Ill_Spiral_1190:HG2_PB_pbsv_15367:HG4_PB_pbsv_15269:HG4_PB_HySA_22290:HG4_Ill_svaba_19056:HG4_Ill_manta_3576:HG4_Ill_Krunchall_21041:HG4_Ill_GATKHC_24328:HG4_Ill_GATKHCSBGrefine_10522:HG4_Ill_250bpfermikitraw_20056:HG4_Ill_150bpfermikitraw_19318:HG2_PB_assemblyticsfalcon_8724:HG2_PB_SVrefine2PB10Xhap12_11092:HG2_Ill_svaba_19069:HG2_Ill_manta_4217:HG2_Ill_SpiralSDKrefine_5463:HG2_Ill_SVrefine2DISCOVARplusDovetail_4169:HG2_Ill_Krunchall_20726:HG2_Ill_GATKHC_24423:HG2_Ill_GATKHCSBGrefine_10182:HG2_Ill_250bpfermikitraw_20372:HG2_Ill_150bpfermikitraw_19205;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10607:HG4_Ill_svaba_19056:HG4_Ill_manta_3576:HG4_Ill_Krunchall_21041:HG4_Ill_GATKHC_24328:HG4_Ill_GATKHCSBGrefine_10522:HG4_Ill_250bpfermikitraw_20056:HG4_Ill_150bpfermikitraw_19318:HG2_PB_assemblyticsfalcon_8724:HG2_PB_SVrefine2PB10Xhap12_11092:HG2_Ill_svaba_19069:HG2_Ill_manta_4217:HG2_Ill_SpiralSDKrefine_5463:HG2_Ill_SVrefine2DISCOVARplusDovetail_4169:HG2_Ill_Krunchall_20726:HG2_Ill_GATKHC_24423:HG2_Ill_GATKHCSBGrefine_10182:HG2_Ill_250bpfermikitraw_20372:HG2_Ill_150bpfermikitraw_19205;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0582524;PBcalls=5;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=25385;DistForward=68992;DistMin=25385;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=43;REFWIDENED=15:40896392-40896486;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:./.:12:5:6:14:./.:1:16:15:0:0/1:35:31:./.:.:.:.:.:.
chr15	42017735	HG2_Ill_GATKHCSBGrefine_10186	AAAATAAATAAGTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAATAAATAAATAAAT	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1676:HG4_Ill_Krunchall_21049:HG3_Ill_Krunchall_20330:HG2_PB_pbsv_15374:HG2_Ill_Krunchall_20734:HG3_PB_assemblyticsfalcon_8706:HG2_PB_assemblyticsPBcR_8448:HG4_PB_assemblyticsfalcon_8585:HG2_PB_assemblyticsfalcon_8731:HG4_PB_HySA_22295:HG2_PB_HySA_27929:HG3_Ill_Krunchall_20329:HG3_PB_pbsv_15020:HG4_Ill_svaba_19065:HG4_Ill_manta_3578:HG4_Ill_GATKHCSBGrefine_10524:HG4_10X_allpass_2810:HG3_Ill_svaba_19226:HG3_Ill_scalpel_14703:HG3_Ill_manta_3437:HG3_Ill_GATKHCSBGrefine_10083:HG3_10X_allpass_2962:HG2_Ill_svaba_19078:HG2_Ill_scalpel_14441:HG2_Ill_manta_4219:HG2_Ill_GATKHCSBGrefine_10186:HG2_10X_allpass_2410:HG4_Ill_MetaSV_1663:HG3_Ill_MetaSV_1730:HG2_Ill_MetaSV_1603:HG2_Ill_breakscan11_2211:HG4_PB_pbsv_15276:HG4_PB_SVrefine2PBcRDovetail_7618:HG4_PB_SVrefine2Falcon1Dovetail_9361:HG4_Ill_SVrefine2DISCOVARDovetail_10797:HG3_PB_SVrefine2PBcRDovetail_7203:HG3_PB_SVrefine2Falcon1Dovetail_9306:HG3_Ill_SVrefine2DISCOVARDovetail_10969:HG2_PB_SVrefine2PBcRplusDovetail_3540:HG2_PB_SVrefine2PB10Xhap12_11095:HG2_PB_SVrefine2Falcon2Bionano_7595:HG2_PB_SVrefine2Falcon1plusDovetail_3777:HG2_Ill_SVrefine2DISCOVARplusDovetail_4176:HG2_10X_SVrefine210Xhap12_10611;NumClusterSVs=44;ExactMatchIDs=HG2_10X_allpass_2410:HG2_Ill_GATKHCSBGrefine_10186:HG2_Ill_manta_4219:HG2_Ill_scalpel_14441:HG2_Ill_svaba_19078:HG3_10X_allpass_2962:HG3_Ill_GATKHCSBGrefine_10083:HG3_Ill_manta_3437:HG3_Ill_scalpel_14703:HG3_Ill_svaba_19226:HG4_10X_allpass_2810:HG4_Ill_GATKHCSBGrefine_10524:HG4_Ill_manta_3578:HG4_Ill_svaba_19065;NumExactMatchSVs=14;ClusterMaxShiftDist=0.110769;ClusterMaxSizeDiff=0.110769;ClusterMaxEditDist=0.110769;PBcalls=17;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-332;DistBack=10399;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=15:42017731-42018080;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:2:23:0:28:1/1:0:21:0:14:1/1:0:49:./.:2:18:.:.:.
chr15	43660427	HG2_PB_assemblyticsfalcon_8739	TAAAGAATGGATCTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2212:HG2_PB_HySA_27943:HG2_Ill_Krunchall_20740:HG2_PB_assemblyticsPBcR_8455:HG4_Ill_Spiral_1191:HG3_Ill_Spiral_15849:HG2_Ill_Spiral_1015:HG4_PB_pbsv_15280:HG2_PB_pbsv_15379:HG4_Ill_MetaSV_1665:HG3_Ill_MetaSV_1731:HG2_Ill_tnscope_1677:HG2_Ill_MetaSV_1607:HG4_PB_SVrefine2PBcRDovetail_7621:HG4_PB_HySA_22302:HG4_Ill_svaba_19070:HG4_Ill_scalpel_14067:HG4_Ill_manta_3579:HG4_Ill_SVrefine2DISCOVARDovetail_10803:HG4_Ill_GATKHCSBGrefine_10527:HG4_10X_allpass_2811:HG3_PB_pbsv_15026:HG3_PB_SVrefine2PBcRDovetail_7207:HG3_PB_SVrefine2Falcon1Dovetail_9311:HG3_Ill_svaba_19232:HG3_Ill_scalpel_14711:HG3_Ill_manta_3439:HG3_Ill_GATKHCSBGrefine_10088:HG3_10X_allpass_2963:HG2_PB_assemblyticsfalcon_8739:HG2_PB_SVrefine2PBcRplusDovetail_3543:HG2_PB_SVrefine2PB10Xhap12_11098:HG2_PB_SVrefine2Falcon2Bionano_7599:HG2_PB_SVrefine2Falcon1plusDovetail_3780:HG2_Ill_svaba_19084:HG2_Ill_scalpel_14449:HG2_Ill_manta_4221:HG2_Ill_SVrefine2DISCOVARplusDovetail_4183:HG2_Ill_GATKHCSBGrefine_10188:HG2_10X_allpass_2411:HG2_10X_SVrefine210Xhap12_10617;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10617:HG2_10X_allpass_2411:HG2_Ill_GATKHCSBGrefine_10188:HG2_Ill_SVrefine2DISCOVARplusDovetail_4183:HG2_Ill_manta_4221:HG2_Ill_scalpel_14449:HG2_Ill_svaba_19084:HG2_PB_SVrefine2Falcon1plusDovetail_3780:HG2_PB_SVrefine2Falcon2Bionano_7599:HG2_PB_SVrefine2PB10Xhap12_11098:HG2_PB_SVrefine2PBcRplusDovetail_3543:HG2_PB_assemblyticsfalcon_8739:HG3_10X_allpass_2963:HG3_Ill_GATKHCSBGrefine_10088:HG3_Ill_manta_3439:HG3_Ill_scalpel_14711:HG3_Ill_svaba_19232:HG3_PB_SVrefine2Falcon1Dovetail_9311:HG3_PB_SVrefine2PBcRDovetail_7207:HG3_PB_pbsv_15026:HG4_10X_allpass_2811:HG4_Ill_GATKHCSBGrefine_10527:HG4_Ill_SVrefine2DISCOVARDovetail_10803:HG4_Ill_manta_3579:HG4_Ill_scalpel_14067:HG4_Ill_svaba_19070:HG4_PB_HySA_22302:HG4_PB_SVrefine2PBcRDovetail_7621;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0841122;ClusterMaxSizeDiff=0.0841122;ClusterMaxEditDist=0.0841122;PBcalls=14;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=10941;DistForward=17821;DistMin=10941;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=15:43660428-43660767;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1220.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:./.:0:0:0:0:1/1:0:13:0:15:1/1:0:65:0/1:2:14:.:.:.
chr15	46067964	HG2_PB_SVrefine2PB10Xhap12_11105	TCAGTACTCAGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTGGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG4_PB_HySA_22325:HG4_Ill_Krunchall_21062:HG2_Ill_Krunchall_20751:HG2_PB_assemblyticsfalcon_8756:HG2_PB_assemblyticsPBcR_8471:HG4_PB_assemblyticsfalcon_8610:HG4_PB_pbsv_15291:HG2_PB_pbsv_15387:HG3_PB_HySA_23122:HG2_PB_HySA_27971:HG3_Ill_MetaSV_1736:HG2_Ill_tnscope_1678:HG2_Ill_MetaSV_1612:HG4_PB_SVrefine2PBcRDovetail_7627:HG4_PB_SVrefine2Falcon1Dovetail_9370:HG4_Ill_svaba_19081:HG4_Ill_scalpel_14081:HG4_Ill_manta_3581:HG4_Ill_SVrefine2DISCOVARDovetail_10814:HG4_Ill_MetaSV_1670:HG4_Ill_GATKHCSBGrefine_10531:HG4_10X_allpass_2814:HG3_PB_pbsv_15036:HG3_PB_assemblyticsfalcon_8732:HG3_PB_SVrefine2PBcRDovetail_7213:HG3_PB_SVrefine2Falcon1Dovetail_9317:HG3_Ill_svaba_19249:HG3_Ill_scalpel_14728:HG3_Ill_manta_3441:HG3_Ill_SVrefine2DISCOVARDovetail_10989:HG3_Ill_GATKHCSBGrefine_10093:HG3_10X_allpass_2965:HG2_PB_SVrefine2PBcRplusDovetail_3548:HG2_PB_SVrefine2PB10Xhap12_11105:HG2_PB_SVrefine2Falcon2Bionano_7603:HG2_PB_SVrefine2Falcon1plusDovetail_3787:HG2_Ill_svaba_19098:HG2_Ill_scalpel_14462:HG2_Ill_manta_4223:HG2_Ill_breakscan11_2214:HG2_Ill_SpiralSDKrefine_5488:HG2_Ill_SVrefine2DISCOVARplusDovetail_4193:HG2_Ill_GATKHCSBGrefine_10192:HG2_10X_allpass_2413:HG2_10X_SVrefine210Xhap12_10628;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10628:HG2_10X_allpass_2413:HG2_Ill_GATKHCSBGrefine_10192:HG2_Ill_SVrefine2DISCOVARplusDovetail_4193:HG2_Ill_SpiralSDKrefine_5488:HG2_Ill_breakscan11_2214:HG2_Ill_manta_4223:HG2_Ill_scalpel_14462:HG2_Ill_svaba_19098:HG2_PB_SVrefine2Falcon1plusDovetail_3787:HG2_PB_SVrefine2Falcon2Bionano_7603:HG2_PB_SVrefine2PB10Xhap12_11105:HG2_PB_SVrefine2PBcRplusDovetail_3548:HG3_10X_allpass_2965:HG3_Ill_GATKHCSBGrefine_10093:HG3_Ill_SVrefine2DISCOVARDovetail_10989:HG3_Ill_manta_3441:HG3_Ill_scalpel_14728:HG3_Ill_svaba_19249:HG3_PB_SVrefine2Falcon1Dovetail_9317:HG3_PB_SVrefine2PBcRDovetail_7213:HG3_PB_assemblyticsfalcon_8732:HG3_PB_pbsv_15036:HG4_10X_allpass_2814:HG4_Ill_GATKHCSBGrefine_10531:HG4_Ill_MetaSV_1670:HG4_Ill_SVrefine2DISCOVARDovetail_10814:HG4_Ill_manta_3581:HG4_Ill_scalpel_14081:HG4_Ill_svaba_19081:HG4_PB_SVrefine2Falcon1Dovetail_9370:HG4_PB_SVrefine2PBcRDovetail_7627;NumExactMatchSVs=32;ClusterMaxShiftDist=0.106782;ClusterMaxSizeDiff=0.106782;ClusterMaxEditDist=0.106782;PBcalls=18;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=18;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-350;DistBack=62592;DistForward=24591;DistMin=24591;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=15:46067965-46068330;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:82:1/1:1:20:1:19:1/1:0:13:0:20:1/1:0:47:./.:2:18:.:.:.
chr15	46184346	HG2_Ill_250bpfermikitraw_20401	ATGAGATTACCAGGTGCTTTTCCTATTTTTCTGTGCTTATTTTGTATGCCACTTTTTCTGCCAAGTATTTTTTCTCCCCATCTCCTCTGTCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10629:HG4_PB_HySA_22327:HG4_Ill_Spiral_1192:HG2_PB_HySA_27973:HG3_PB_pbsv_15037:HG3_PB_HySA_23124:HG4_PB_pbsv_15292:HG2_PB_pbsv_15388:HG2_PB_assemblyticsPBcR_8474:HG4_Ill_svaba_19083:HG4_Ill_scalpel_14083:HG4_Ill_Krunchall_21064:HG4_Ill_GATKHCSBGrefine_10532:HG4_Ill_250bpfermikitraw_20083:HG4_Ill_150bpfermikitraw_19342:HG3_Ill_svaba_19251:HG3_Ill_manta_3442:HG3_Ill_Krunchall_20352:HG3_Ill_GATKHCSBGrefine_10094:HG3_Ill_250bpfermikitraw_19808:HG3_10X_allpass_2966:HG2_PB_SVrefine2PBcRplusDovetail_3549:HG2_Ill_svaba_19100:HG2_Ill_SpiralSDKrefine_5490:HG2_Ill_GATKHCSBGrefine_10193:HG2_Ill_250bpfermikitraw_20401:HG4_PB_SVrefine2PBcRDovetail_7628:HG4_PB_SVrefine2Falcon1Dovetail_9371:HG4_Ill_SVrefine2DISCOVARDovetail_10815:HG3_PB_SVrefine2Falcon1Dovetail_9318:HG3_Ill_SVrefine2DISCOVARDovetail_10990:HG2_PB_SVrefine2PB10Xhap12_11106:HG2_PB_SVrefine2Falcon2Bionano_7604:HG2_Ill_SVrefine2DISCOVARplusDovetail_4194;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20401:HG2_Ill_GATKHCSBGrefine_10193:HG2_Ill_SpiralSDKrefine_5490:HG2_Ill_svaba_19100:HG2_PB_SVrefine2PBcRplusDovetail_3549:HG3_10X_allpass_2966:HG3_Ill_250bpfermikitraw_19808:HG3_Ill_GATKHCSBGrefine_10094:HG3_Ill_Krunchall_20352:HG3_Ill_manta_3442:HG3_Ill_svaba_19251:HG4_Ill_150bpfermikitraw_19342:HG4_Ill_250bpfermikitraw_20083:HG4_Ill_GATKHCSBGrefine_10532:HG4_Ill_Krunchall_21064:HG4_Ill_scalpel_14083:HG4_Ill_svaba_19083;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0217391;ClusterMaxSizeDiff=0.0217391;ClusterMaxEditDist=0.0437158;PBcalls=13;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-91;DistBack=4919;DistForward=-20;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=104;REFWIDENED=15:46184328-46184522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:35:0|1:29:1:2:20:1|0:0:9:26:1:0/1:15:19:./.:.:.:.:.:.
chr15	47292865	HG2_Ill_GATKHC_24464	TACAATCAAGATAGAGAATACTACACTATCACAACCCAGATCCTGGCATTG	T	20	PASS	ClusterIDs=HG4_Ill_150bpfermikitraw_19347:HG4_Ill_GATKHC_24365:HG4_Ill_GATKHCSBGrefine_10535:HG2_Ill_GATKHC_24464:HG2_Ill_GATKHCSBGrefine_10195:HG2_PB_pbsv_15390:HG2_PB_assemblyticsPBcR_8479:HG4_PB_pbsv_15295;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10195:HG2_Ill_GATKHC_24464:HG4_Ill_GATKHCSBGrefine_10535:HG4_Ill_GATKHC_24365;NumExactMatchSVs=4;ClusterMaxShiftDist=0.038835;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0582524;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=-51;DistForward=18;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=315;REFWIDENED=15:47292674-47293038;PctSeqSimilarity=0.9725;PctSizeSimilarity=0.9804;PctRecOverlap=0.9231;SizeDiff=-1;StartDistance=4;EndDistance=3;GTMatch=0;TruScore=95;MatchId=1223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:22:./.:8:20:16:2:0/0:12:1:40:1:0/0:52:0:./.:.:.:.:.:.
chr15	47720633	HG4_PB_SVrefine2PBcRDovetail_7631	GTAAAAAAGTATTTAGGCGCAGATCTACCCTTAAAAGTGGGTAAAATGGGGCAAGGTGCAGTGGGTCACACCTGTAATCCCAGCACTTTAGGATTTAGGAGGCCAAGGTAGGTGGATTGCTTGAGGTCAAGAGTTCAAGACCAACATGGCCAACAGGAGGAAGCCCTGTCTCTAC	G	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_8619:HG2_PB_SVrefine2PBcRplusDovetail_3551:HG2_PB_assemblyticsPBcR_8484:HG4_Ill_Krunchall_21075:HG4_PB_HySA_22337:HG3_Ill_MetaSV_1737:HG4_PB_pbsv_15298:HG4_PB_SVrefine2PBcRDovetail_7631:HG4_PB_SVrefine2Falcon1Dovetail_9373:HG4_Ill_svaba_19092:HG4_Ill_scalpel_14087:HG4_Ill_manta_3583:HG4_Ill_MetaSV_1672:HG4_Ill_GATKHCSBGrefine_10537:HG4_10X_allpass_2816:HG3_PB_pbsv_15042:HG3_Ill_svaba_19264:HG3_Ill_manta_3445:HG3_Ill_GATKHCSBGrefine_10098:HG3_10X_allpass_2968:HG2_PB_pbsv_15393:HG2_Ill_svaba_19110:HG2_Ill_scalpel_14472:HG2_Ill_manta_4225:HG2_Ill_breakscan11_2215:HG2_Ill_SpiralSDKrefine_5500:HG2_Ill_MetaSV_1613:HG2_Ill_GATKHCSBGrefine_10197:HG2_10X_SVrefine210Xhap12_10630;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10630:HG2_Ill_GATKHCSBGrefine_10197:HG2_Ill_MetaSV_1613:HG2_Ill_SpiralSDKrefine_5500:HG2_Ill_breakscan11_2215:HG2_Ill_manta_4225:HG2_Ill_scalpel_14472:HG2_Ill_svaba_19110:HG2_PB_pbsv_15393:HG3_10X_allpass_2968:HG3_Ill_GATKHCSBGrefine_10098:HG3_Ill_manta_3445:HG3_Ill_svaba_19264:HG3_PB_pbsv_15042:HG4_10X_allpass_2816:HG4_Ill_GATKHCSBGrefine_10537:HG4_Ill_MetaSV_1672:HG4_Ill_manta_3583:HG4_Ill_scalpel_14087:HG4_Ill_svaba_19092:HG4_PB_SVrefine2Falcon1Dovetail_9373:HG4_PB_SVrefine2PBcRDovetail_7631:HG4_PB_pbsv_15298;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0114286;ClusterMaxSizeDiff=0.0114286;ClusterMaxEditDist=0.0284091;PBcalls=9;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-174;DistBack=60708;DistForward=-168;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=15:47720634-47720808;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1224.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:34:0|1:44:1:0:32:0|1:44:0:0:20:0/1:39:16:./.:.:.:.:.:.
chr15	50787434	HG3_Ill_GATKHC_24348	TATATATACGTGTATATATACATACATATATACACATATATATACACATACATATATAC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7221:HG2_PB_assemblyticsPBcR_8501:HG2_PB_assemblyticsfalcon_8782:HG4_Ill_GATKHC_24396:HG4_Ill_GATKHCSBGrefine_10544:HG3_Ill_GATKHC_24349:HG3_Ill_GATKHCSBGrefine_10107:HG2_Ill_GATKHC_24494:HG2_Ill_GATKHCSBGrefine_10204:HG2_PB_PB10Xdip_10692:HG2_PB_PB10Xdip_10691:HG2_Ill_manta_4228:HG3_PB_HySA_23155:HG4_PB_assemblyticsfalcon_8632:HG3_PB_assemblyticsfalcon_8757:HG4_PB_HySA_22356:HG2_PB_pbsv_15401:HG3_PB_pbsv_15048:HG2_PB_HySA_28003:HG4_PB_pbsv_15309:HG4_Ill_svaba_19107:HG4_Ill_Krunchall_21097:HG4_Ill_GATKHC_24395:HG4_Ill_GATKHCSBGrefine_10543:HG4_Ill_250bpfermikitraw_20112:HG2_PB_HySA_28002:HG4_Ill_svaba_19106:HG4_Ill_scalpel_14099:HG4_Ill_Krunchall_21096:HG4_Ill_250bpfermikitraw_20111:HG4_Ill_150bpfermikitraw_19371:HG3_Ill_svaba_19279:HG3_Ill_Krunchall_20384:HG3_Ill_GATKHC_24348:HG3_Ill_GATKHCSBGrefine_10106:HG3_Ill_250bpfermikitraw_19837:HG3_Ill_150bpfermikitraw_19298:HG2_Ill_svaba_19127:HG2_Ill_Krunchall_20777:HG2_Ill_250bpfermikitraw_20430;NumClusterSVs=40;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20430:HG2_Ill_Krunchall_20777:HG2_Ill_svaba_19127:HG3_Ill_150bpfermikitraw_19298:HG3_Ill_250bpfermikitraw_19837:HG3_Ill_GATKHCSBGrefine_10106:HG3_Ill_GATKHC_24348:HG3_Ill_Krunchall_20384:HG3_Ill_svaba_19279:HG4_Ill_150bpfermikitraw_19371:HG4_Ill_250bpfermikitraw_20111:HG4_Ill_Krunchall_21096:HG4_Ill_scalpel_14099:HG4_Ill_svaba_19106;NumExactMatchSVs=14;ClusterMaxShiftDist=0.121739;ClusterMaxSizeDiff=0.121739;ClusterMaxEditDist=0.126126;PBcalls=14;Illcalls=26;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=15;NumTechs=2;NumTechsExact=1;SVLEN=-58;DistBack=9686;DistForward=18222;DistMin=9686;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1204;REFWIDENED=15:50777660-50788691;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:71:1/1:5:34:2:35:1/1:0:12:0:20:1/1:0:29:./.:.:.:.:.:.
chr15	50921353	HG3_PB_assemblyticsfalcon_8760	GATATATACTTTAAGGTTTTTGATATACTCCAAAATACTTCAGATTGCTTCTACCATCCACCATGGGAGGGGTATAACCATAACCATTTCTCCATGTGCCATGGAGAGGGGAGTTTCCTTCTTCTTCTCTTTTCTGAGACCGAGTCTCTCCCTGTTGTCCAGGCTGGAGTGCAGTGGCGTGGTCTTGGTTCACTGCAACCTCTGCCTCCTGGGCTCAACTGATCCTCCCACCTCAGCCTCTCAAGTAGCTGGGACCACTGGTGTATGGCACCACACCAGGCTAAGTTTTGTATTTTTTGTAGAGATAGGGTTTTGCCAAATTGCCCAGACTGATCTCAAACTCCTGGGCTCAAGCAATCTGCTTGCCTCAGCCTCCCAAAATTTATTACTGTAACATTGGCCATCCTTCCATATTTTCTCTAAGCATTTGGATTCCTCTACTA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_15403:HG2_10X_allpass_2414:HG3_Ill_Krunchall_20387:HG2_Ill_Krunchall_20780:HG3_10X_allpass_2969:HG2_Ill_tnscope_1679:HG3_PB_pbsv_15050:HG3_PB_assemblyticsfalcon_8760:HG3_PB_SVrefine2PBcRDovetail_7222:HG3_PB_SVrefine2Falcon1Dovetail_9331:HG3_Ill_manta_3448:HG3_Ill_GATKHCSBGrefine_10108:HG2_PB_SVrefine2PB10Xhap12_11115:HG2_PB_SVrefine2Falcon2Bionano_7614:HG2_PB_SVrefine2Falcon1plusDovetail_3794:HG2_Ill_manta_4229:HG2_Ill_SpiralSDKrefine_5512:HG2_Ill_SVrefine2DISCOVARplusDovetail_4211:HG2_Ill_MetaSV_1616:HG2_Ill_GATKHCSBGrefine_10205:HG2_Ill_breakscan11_2216:HG3_Ill_Spiral_15888:HG2_PB_assemblyticsfalcon_8784;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10205:HG2_Ill_MetaSV_1616:HG2_Ill_SVrefine2DISCOVARplusDovetail_4211:HG2_Ill_SpiralSDKrefine_5512:HG2_Ill_manta_4229:HG2_PB_SVrefine2Falcon1plusDovetail_3794:HG2_PB_SVrefine2Falcon2Bionano_7614:HG2_PB_SVrefine2PB10Xhap12_11115:HG3_Ill_GATKHCSBGrefine_10108:HG3_Ill_manta_3448:HG3_PB_SVrefine2Falcon1Dovetail_9331:HG3_PB_SVrefine2PBcRDovetail_7222:HG3_PB_assemblyticsfalcon_8760:HG3_PB_pbsv_15050;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0181818;ClusterMaxSizeDiff=0.0181818;ClusterMaxEditDist=0.0181818;PBcalls=9;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-442;DistBack=-211;DistForward=-443;DistMin=-443;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=15:50921354-50921797;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1226.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:36:0|1:36:0:0:29:0|1:65:0:0:24:0/1:60:10:0/1:38:9:.:.:.
chr15	51586156	HG2_PB_SVrefine2Falcon2Bionano_7618	AGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCCGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCTGTCTAGGAAGTGAGGAGCGTCTCTGCCCGGCTGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCTGCCATCCCATCTAGGAAGTGACGAGC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_15409:HG4_PB_pbsv_15315:HG4_Ill_GATKHCSBGrefine_10548:HG4_10X_allpass_2817:HG2_Ill_GATKHCSBGrefine_10209:HG4_Ill_MetaSV_1676:HG2_Ill_MetaSV_1618:HG2_PB_SVrefine2PB10Xhap12_11119:HG2_PB_SVrefine2Falcon2Bionano_7618:HG2_PB_SVrefine2Falcon1plusDovetail_3799:HG2_10X_SVrefine210Xhap12_10639;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10639:HG2_PB_SVrefine2Falcon1plusDovetail_3799:HG2_PB_SVrefine2Falcon2Bionano_7618:HG2_PB_SVrefine2PB10Xhap12_11119;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00365631;ClusterMaxSizeDiff=0.00365631;ClusterMaxEditDist=0.0255942;PBcalls=5;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-272;DistBack=70365;DistForward=-207;DistMin=-207;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=206;REFWIDENED=15:51586157-51586634;PctSeqSimilarity=0.9679;PctSizeSimilarity=1;PctRecOverlap=0.9011;SizeDiff=0;StartDistance=-27;EndDistance=-27;GTMatch=0;TruScore=95;MatchId=1227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:22:0|1:46:2:4:20:./.:9:3:32:0:./.:29:3:./.:.:.:.:.:.
chr15	52525183	HG2_PB_SVrefine2PBcRplusDovetail_3562	AAAATAAATAGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAATAAAT	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2217:HG2_10X_allpass_2415:HG2_PB_HySA_28019:HG4_PB_pbsv_15318:HG3_Ill_Krunchall_20395:HG2_Ill_Krunchall_20791:HG4_PB_assemblyticsfalcon_8644:HG3_PB_assemblyticsfalcon_8769:HG2_PB_assemblyticsfalcon_8799:HG2_PB_assemblyticsPBcR_8518:HG4_PB_SVrefine2PBcRDovetail_7640:HG4_PB_SVrefine2Falcon1Dovetail_9384:HG4_Ill_scalpel_14109:HG4_Ill_SVrefine2DISCOVARDovetail_10841:HG4_Ill_GATKHCSBGrefine_10550:HG4_10X_allpass_2819:HG3_PB_pbsv_15057:HG3_PB_SVrefine2PBcRDovetail_7229:HG3_PB_SVrefine2Falcon1Dovetail_9336:HG3_Ill_scalpel_14759:HG3_Ill_SVrefine2DISCOVARDovetail_11018:HG3_Ill_GATKHCSBGrefine_10114:HG3_10X_allpass_2971:HG2_PB_pbsv_15411:HG2_PB_SVrefine2PBcRplusDovetail_3562:HG2_PB_SVrefine2PB10Xhap12_11123:HG2_PB_SVrefine2Falcon2Bionano_7621:HG2_PB_SVrefine2Falcon1plusDovetail_3803:HG2_Ill_manta_4232:HG2_Ill_SVrefine2DISCOVARplusDovetail_4217:HG2_Ill_GATKHCSBGrefine_10211:HG2_10X_SVrefine210Xhap12_10643:HG4_Ill_Spiral_1195:HG4_Ill_MetaSV_1679:HG3_PB_HySA_23171:HG3_Ill_Spiral_15895:HG2_Ill_tnscope_1680:HG2_Ill_Spiral_1017:HG2_Ill_MetaSV_1620;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10643:HG2_Ill_GATKHCSBGrefine_10211:HG2_Ill_SVrefine2DISCOVARplusDovetail_4217:HG2_Ill_manta_4232:HG2_PB_SVrefine2Falcon1plusDovetail_3803:HG2_PB_SVrefine2Falcon2Bionano_7621:HG2_PB_SVrefine2PB10Xhap12_11123:HG2_PB_SVrefine2PBcRplusDovetail_3562:HG2_PB_pbsv_15411:HG3_10X_allpass_2971:HG3_Ill_GATKHCSBGrefine_10114:HG3_Ill_SVrefine2DISCOVARDovetail_11018:HG3_Ill_scalpel_14759:HG3_PB_SVrefine2Falcon1Dovetail_9336:HG3_PB_SVrefine2PBcRDovetail_7229:HG3_PB_pbsv_15057:HG4_10X_allpass_2819:HG4_Ill_GATKHCSBGrefine_10550:HG4_Ill_SVrefine2DISCOVARDovetail_10841:HG4_Ill_scalpel_14109:HG4_PB_SVrefine2Falcon1Dovetail_9384:HG4_PB_SVrefine2PBcRDovetail_7640;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0638298;ClusterMaxSizeDiff=0.0638298;ClusterMaxEditDist=0.0638298;PBcalls=17;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=-355;DistForward=-323;DistMin=-355;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2579;REFWIDENED=15:52515359-52525516;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:1/1:1:20:0:7:1/1:0:16:0:11:1/1:0:51:0/1:2:13:.:.:.
chr15	54199919	HG3_PB_SVrefine2PBcRDovetail_7233	AAGAATTATTCAGGTATTTCTCCTTTAGCAGAGAGCAAGGTCTCTATCTATCTTCATTGCTACTATATCTCTAGTTCCAAGCACAATGCTTAACATAAATGATGCTACTTAAATATTTGTTGAATAAATGAGTAAAATAAATAAAAGCAAAATAATAAACAGAGCCATTTTGGAGATTACATCACCCTTGATATTTAATTTGTTTCTGGTTTTATTCTAGTTAGAATTTAGAAATTACTAATTTTCATAGATAATATTTTAAATACATGTATCTTGAAGTTTTAGGATTTACTGCAATTACTGAGTAGTTAGAAAGAGGGGCAGTGGGAAAATTATCCTTTAGCTGTTGAATATTCTACCACTTGTTAGCATTTCTTATAAATGTCAACGTAAGAGGAGAATAGGGGCTTAGAAATATTGTCCCTGTTCAGTGTTAGGTGCCCACTCATTGTCCACAGCATATCAGAAACATGCATGTGTCCTTATCATTTAATGGGTGCTCCTTTTTTTGTCCTACTTTTCTTGTTTGTCCTATTTTTACCCTAGCAAACTTACAGAGACTTGCATTTTAGAAGAAAGACTTAGGGAATACTGTAAAGTTTCTAAGTAATGGCATATATACAAGTTCACATACACTCTTAGACTTAATAGTAGTTACATTATTCCAGGGCTTACACACACAAAAATGAAATGGTCAGGCTAGCAGGATACAACCCTTTGGGGAGTATACATTATGTTAAAAATGTAGTATGCATGCCTGTAATCCTAGCACTTTAGGAGGCTGAGGTGGACAGATTACTTAAGCCCAGAAGTTCTAGACCAGCCTGGGCAACATGGAAAACCTTGTCTCTACAAACAAACAAACAAACAAACACAAAACATACAAACCCAGGCATGGTGATGTGCACCTGTAGTCCCAGCTTGGGGGACTGCAGAAGGAGGATCAGCTGAGATTGGGAGGTTGAAGCTGCAGTGAGACGAGATTGCACCACTGCACTCCAGTCTGGGTGACAGAATGAGAACCTTTCTCCAAAAAAAAAAAAAAAAAAGTGTATCTAAATATTTGGTTTTATACATTTTTTCAAATATTGCTGTTTTAGAATACTTAATTATATTTAGCATTAGTTGAGTGTTATGGCACAAATGATACATGCTAATTTAGGTCACATTAACAAAATTATAAGAATGTTACAGATGATTTTATTGTTAACATAAACATTATTAATCATTGGTTCAACATATCTATAAACACATTTGTATATGTGGTTTGTTTATATATATGCACTATATAGTGGTATAAATAATATTGTTTTATCAAAAACTTATATGCATAATAAAAATCCAAGTGATAAAAGTATATTCAATGTAAACTAAGTTTCCCTCCAAAGGCAGACTACCAAGACCCACTTCCTGAGTGCCAAAGTCCTACTCTTCAGAGAAAATCGCCATCGCTACTTTTCTCCTTATTCTTGCAGAAATGCCCAACATATATGAGTTATTTATGTGTATCACTTTTTAAAATTCAATATCAGAGCACTTTTCTGCACTGTGCTTTTTTTTAACCATTTTATCATGGAGATTTTATTCCATATCAGCACATATTAAATGATATATCTAACAATGAAATATGAATCAAAATGTAGTGTAACCCCTGAAGCACCAAGACATGATTCTCCTGCTGATAGAATCCTACTTCACATTTTAGGGATGAGGAGACAGGCTCAAGAAGGTAATGTGAAAATGAAACAGTGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAGGAGATCGAGAGCATCCTGGCCAACATAGTGAAACCCCGTTTCTACTAAAAATATTAGCTGGGTGTGGTGGTGCATGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTTCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCAAGAGTATTCTAAGTCTGGTGACAACCCCCTTTTAAGCTAATTTATCCAAAACCCTTATTTCCCTCGCTTCTTTTTAATTCTTTCTTTGAACTATTGCGTTTCATGTTGAGTTTATCCATCAATATATTGCACCTGTCAGTCAAGTGGACATATTTTTTAAGAACACATTGTACAGGGAACCACTTGAGCACTGAATGCAGAGGAAGCAGTGTTACCTCGGTTTTGCTGGAAGTAGGCTTCTTGGATAGTTTTCTTTCTTTGATGAAGTTTCTGTATTTTCATGTTTTAAGTGGAAATACTTTTTTTTTTTTTTTAATTTGCCTTGGAGCCAATGTATTTGTTCCTGGTGGTAGGGAAACTGTGCCTGCGGGCCACAGGACTTAAAGGAAAACTGTGGTATGGAGCTCTGCTTGAATTAAAAACTTTTTTTTTTCTTTGAGTATCCTTAGCTACTTATCTGGCAAGTGCAGGACCCAGGTGTTGGCCTGAACTCTGCCAAACATATGTAACACTTAAATGTGTGCAGTTTCCCTTCTTGCTACATCCATGTTGTCACTTAACCCCCAGGAGGTTTTTATTATCTTTTTGTTAATGTCAGGCTGTGAGGTACGTGGATGTGATTTGGTCAAGGAATAGGCCTGGGCAGATACCCAGGCCTGCATGACTCACTGAGTTTGGCATGCAAGCACACACCTCCACTTATTATGTAACCTGTTTTTGTAAGTTCATATTTGGCTTTGAGCCACTATTGCTGTAAAAGGTATAACTGCCCTGTTGACACTGTGCACAAGAGACATGGCTCTTGGGGCTCGGCTCAGCTCAACATGGCTTGACATGGTGGGTGCGCTGGCGCCCAGAGAAAGAGAGAGTCAGAGCTTTCCATCTTTGCAGACAGAGGGGATCCAGGATACAGCTCGGCTTGATCGTGCCCAGAGAAAGAGTTAAGCTGCTGACCCTAAAGCCAAGGGAGAGCAGGCCGTGCAGTTGCAGGTGTGGGGGCAGCAGGAGCCACAGAGCCAAAGCAGACAGCCGAGATACGGGCGAACAGTGTAGAGAGCTAGTGTGAGAAAGCTGTTGATGAGAGCTGCTGCTGAATAAAATCATTTTTCACCTGCCTACGGCCCCCCGAGTGTTCTTTCTGCTTACCCACCCACTCCCTCCAGACCTCAACATGACCTTTGGCGTAGTCATGTACCTGACAATTGCGACGTTGGCAGGATGAAGTGAGTAGGTCTTTGGCCCCTGAGGGCTCCTGGGTCAGCTATGTGGCTGC	TT	20	PASS	ClusterIDs=HG3_10X_allpass_2972:HG3_PB_pbsv_15066:HG2_PB_pbsv_15418:HG2_Ill_SpiralSDKrefine_5528:HG4_10X_allpass_2821:HG2_Ill_tnscope_1681:HG4_PB_SVrefine2PBcRDovetail_7643:HG4_Ill_SVrefine2DISCOVARDovetail_10853:HG3_PB_SVrefine2PBcRDovetail_7233:HG3_Ill_SVrefine2DISCOVARDovetail_11026:HG2_PB_SVrefine2PBcRplusDovetail_3565:HG2_PB_SVrefine2PB10Xhap12_11128:HG2_PB_SVrefine2Falcon1plusDovetail_3806:HG2_PB_PB10Xdip_10711:HG2_Ill_SVrefine2DISCOVARplusDovetail_4224:HG2_10X_SVrefine210Xhap12_10653:HG4_Ill_MetaSV_1682:HG3_Ill_MetaSV_1746:HG2_Ill_MetaSV_1623:HG2_10X_allpass_2416:HG2_PB_assemblyticsfalcon_8811:HG2_PB_assemblyticsPBcR_8528:HG4_PB_pbsv_15324:HG4_Ill_Krunchall_21123:HG2_Ill_Krunchall_20804;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10653:HG2_Ill_SVrefine2DISCOVARplusDovetail_4224:HG2_PB_PB10Xdip_10711:HG2_PB_SVrefine2Falcon1plusDovetail_3806:HG2_PB_SVrefine2PB10Xhap12_11128:HG2_PB_SVrefine2PBcRplusDovetail_3565:HG3_Ill_SVrefine2DISCOVARDovetail_11026:HG3_PB_SVrefine2PBcRDovetail_7233:HG4_Ill_SVrefine2DISCOVARDovetail_10853:HG4_PB_SVrefine2PBcRDovetail_7643;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00277222;ClusterMaxSizeDiff=0.00277222;ClusterMaxEditDist=0.00277222;PBcalls=11;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-3245;DistBack=-3247;DistForward=3136;DistMin=-3247;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=15:54199919-54203165;PctSeqSimilarity=0.9998;PctSizeSimilarity=1;PctRecOverlap=0.9997;SizeDiff=0;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:48:./.:21:7:11:21:0|1:35:0:0:27:0/1:54:18:0/1:203:95:3216:.:.
chr15	55218215	HG2_Ill_GATKHCSBGrefine_10222	GGATAATTACCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTATTATACCCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAATATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGAGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATATTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGTAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGTATTTTCTTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCTGCTGTTAGTCTGATAGGCTTCCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGTGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCATGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGCCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCATCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCCTCACTATAGCATATTTTTAAGAGTGAAGACTGGAACAATCTAAGCATCCAGCAATAAGGAAATTGACAAATAAAATGTGGTATATTCATGTGATGGACTTCTATAAAACAGCTAAAAGAAATGAATC	G	20	PASS	ClusterIDs=HG2_Ill_tnscope_1682:HG3_PB_assemblyticsfalcon_8793:HG4_PB_assemblyticsfalcon_8671:HG2_PB_assemblyticsfalcon_8819:HG2_PB_assemblyticsPBcR_8536:HG4_PB_pbsv_15330:HG2_Ill_MetaSV_1626:HG4_PB_SVrefine2PBcRDovetail_7646:HG4_PB_SVrefine2Falcon1Dovetail_9394:HG4_Ill_SVrefine2DISCOVARDovetail_10858:HG4_Ill_MetaSV_1685:HG4_Ill_GATKHCSBGrefine_10565:HG3_PB_pbsv_15072:HG3_PB_SVrefine2PBcRDovetail_7237:HG3_PB_SVrefine2Falcon1Dovetail_9344:HG3_Ill_SVrefine2DISCOVARDovetail_11032:HG3_Ill_MetaSV_1748:HG3_Ill_GATKHCSBGrefine_10125:HG2_PB_pbsv_15422:HG2_PB_SVrefine2PBcRplusDovetail_3570:HG2_PB_SVrefine2PB10Xhap12_11132:HG2_PB_SVrefine2Falcon2Bionano_7628:HG2_PB_SVrefine2Falcon1plusDovetail_3810:HG2_Ill_breakscan11_2219:HG2_Ill_SVrefine2DISCOVARplusDovetail_4227:HG2_Ill_GATKHCSBGrefine_10222:HG2_10X_SVrefine210Xhap12_10659;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10659:HG2_Ill_GATKHCSBGrefine_10222:HG2_Ill_SVrefine2DISCOVARplusDovetail_4227:HG2_Ill_breakscan11_2219:HG2_PB_SVrefine2Falcon1plusDovetail_3810:HG2_PB_SVrefine2Falcon2Bionano_7628:HG2_PB_SVrefine2PB10Xhap12_11132:HG2_PB_SVrefine2PBcRplusDovetail_3570:HG2_PB_pbsv_15422:HG3_Ill_GATKHCSBGrefine_10125:HG3_Ill_MetaSV_1748:HG3_Ill_SVrefine2DISCOVARDovetail_11032:HG3_PB_SVrefine2Falcon1Dovetail_9344:HG3_PB_SVrefine2PBcRDovetail_7237:HG3_PB_pbsv_15072:HG4_Ill_GATKHCSBGrefine_10565:HG4_Ill_MetaSV_1685:HG4_Ill_SVrefine2DISCOVARDovetail_10858:HG4_PB_SVrefine2Falcon1Dovetail_9394:HG4_PB_SVrefine2PBcRDovetail_7646;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00515713;ClusterMaxSizeDiff=0.00515713;ClusterMaxEditDist=0.00515713;PBcalls=15;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-6209;DistBack=3197;DistForward=-6195;DistMin=-6195;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=15:55218216-55224439;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:133:1/1:0:26:1:23:1/1:0:18:0:20:1/1:0:13:1/1:1:428:6240:.:.
chr15	55429892	HG2_10X_SVrefine210Xhap12_10660	GTAAAGCAAGTTCTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10660:HG3_10X_allpass_2974:HG2_10X_allpass_2417:HG2_PB_assemblyticsfalcon_8823:HG2_PB_assemblyticsPBcR_8538:HG4_Ill_Krunchall_21136:HG3_Ill_Krunchall_20420:HG2_Ill_Krunchall_20819:HG3_PB_assemblyticsfalcon_8797:HG4_PB_assemblyticsfalcon_8675:HG3_PB_pbsv_15075:HG2_PB_pbsv_15425:HG4_PB_pbsv_15333:HG4_Ill_MetaSV_1686:HG3_Ill_MetaSV_1749:HG2_PB_HySA_28046:HG2_Ill_tnscope_1683:HG2_Ill_MetaSV_1627:HG4_PB_SVrefine2PBcRDovetail_7647:HG4_PB_SVrefine2Falcon1Dovetail_9395:HG4_Ill_scalpel_14125:HG4_Ill_manta_3589:HG4_Ill_SVrefine2DISCOVARDovetail_10861:HG4_Ill_GATKHCSBGrefine_10566:HG4_10X_allpass_2822:HG3_PB_SVrefine2PBcRDovetail_7239:HG3_PB_SVrefine2Falcon1Dovetail_9346:HG3_Ill_scalpel_14773:HG3_Ill_manta_3454:HG3_Ill_SVrefine2DISCOVARDovetail_11034:HG3_Ill_GATKHCSBGrefine_10126:HG2_PB_SVrefine2PBcRplusDovetail_3571:HG2_PB_SVrefine2PB10Xhap12_11133:HG2_PB_SVrefine2Falcon2Bionano_7630:HG2_PB_SVrefine2Falcon1plusDovetail_3812:HG2_Ill_scalpel_14513:HG2_Ill_manta_4236:HG2_Ill_SpiralSDKrefine_5542:HG2_Ill_SVrefine2DISCOVARplusDovetail_4229:HG2_Ill_GATKHCSBGrefine_10223;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10660:HG4_PB_SVrefine2PBcRDovetail_7647:HG4_PB_SVrefine2Falcon1Dovetail_9395:HG4_Ill_scalpel_14125:HG4_Ill_manta_3589:HG4_Ill_SVrefine2DISCOVARDovetail_10861:HG4_Ill_GATKHCSBGrefine_10566:HG4_10X_allpass_2822:HG3_PB_SVrefine2PBcRDovetail_7239:HG3_PB_SVrefine2Falcon1Dovetail_9346:HG3_Ill_scalpel_14773:HG3_Ill_manta_3454:HG3_Ill_SVrefine2DISCOVARDovetail_11034:HG3_Ill_GATKHCSBGrefine_10126:HG2_PB_SVrefine2PBcRplusDovetail_3571:HG2_PB_SVrefine2PB10Xhap12_11133:HG2_PB_SVrefine2Falcon2Bionano_7630:HG2_PB_SVrefine2Falcon1plusDovetail_3812:HG2_Ill_scalpel_14513:HG2_Ill_manta_4236:HG2_Ill_SpiralSDKrefine_5542:HG2_Ill_SVrefine2DISCOVARplusDovetail_4229:HG2_Ill_GATKHCSBGrefine_10223;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0855784;ClusterMaxSizeDiff=0.0855784;ClusterMaxEditDist=0.0855784;PBcalls=16;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=78698;DistForward=31924;DistMin=31924;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=15:55429893-55430227;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:49:1/1:0:12:0:7:1/1:0:10:0:10:1/1:0:51:./.:2:19:.:.:.
chr15	58596496	HG4_Ill_GATKHCSBGrefine_10582	GCCAACATTTTATTTTATTTTTTTTTATTTTTATTTTTATTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2220:HG2_PB_pbsv_15442:HG4_Ill_Krunchall_21172:HG2_Ill_Krunchall_20854:HG4_PB_assemblyticsfalcon_8705:HG3_PB_assemblyticsfalcon_8822:HG2_PB_assemblyticsfalcon_8857:HG2_PB_assemblyticsPBcR_8577:HG3_Ill_Krunchall_20456:HG2_Ill_Krunchall_20853:HG2_PB_HySA_28089:HG4_PB_pbsv_15350:HG4_Ill_MetaSV_1690:HG3_Ill_MetaSV_1751:HG2_Ill_tnscope_1684:HG2_Ill_MetaSV_1631:HG4_PB_SVrefine2Falcon1Dovetail_9405:HG4_Ill_manta_3595:HG4_Ill_SVrefine2DISCOVARDovetail_10877:HG4_Ill_GATKHCSBGrefine_10582:HG4_10X_allpass_2823:HG3_PB_pbsv_15088:HG3_PB_SVrefine2PBcRDovetail_7247:HG3_PB_SVrefine2Falcon1Dovetail_9355:HG3_Ill_scalpel_14795:HG3_Ill_manta_3459:HG3_Ill_SVrefine2DISCOVARDovetail_11053:HG3_Ill_GATKHCSBGrefine_10129:HG3_10X_allpass_2975:HG2_PB_SVrefine2PBcRplusDovetail_3580:HG2_PB_SVrefine2PB10Xhap12_11145:HG2_PB_SVrefine2Falcon2Bionano_7641:HG2_PB_SVrefine2Falcon1plusDovetail_3822:HG2_Ill_scalpel_14535:HG2_Ill_manta_4240:HG2_Ill_SVrefine2DISCOVARplusDovetail_4246:HG2_Ill_GATKHCSBGrefine_10231:HG2_10X_allpass_2418:HG2_10X_SVrefine210Xhap12_10670;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10670:HG2_10X_allpass_2418:HG2_Ill_GATKHCSBGrefine_10231:HG2_Ill_SVrefine2DISCOVARplusDovetail_4246:HG2_Ill_manta_4240:HG2_Ill_scalpel_14535:HG2_PB_SVrefine2Falcon1plusDovetail_3822:HG2_PB_SVrefine2Falcon2Bionano_7641:HG2_PB_SVrefine2PB10Xhap12_11145:HG2_PB_SVrefine2PBcRplusDovetail_3580:HG3_10X_allpass_2975:HG3_Ill_GATKHCSBGrefine_10129:HG3_Ill_SVrefine2DISCOVARDovetail_11053:HG3_Ill_manta_3459:HG3_Ill_scalpel_14795:HG3_PB_SVrefine2Falcon1Dovetail_9355:HG3_PB_SVrefine2PBcRDovetail_7247:HG3_PB_pbsv_15088:HG4_10X_allpass_2823:HG4_Ill_GATKHCSBGrefine_10582:HG4_Ill_SVrefine2DISCOVARDovetail_10877:HG4_Ill_manta_3595:HG4_PB_SVrefine2Falcon1Dovetail_9405;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0662461;ClusterMaxSizeDiff=0.0662461;ClusterMaxEditDist=0.0662461;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=2029;DistForward=110545;DistMin=2029;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=15:58596497-58596828;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1232.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:82:1/1:0:34:0:34:1/1:0:21:0:18:1/1:0:44:./.:3:5:.:.:.
chr15	58912848	HG2_Ill_SVrefine2DISCOVARplusDovetail_4248	AAAGAATATGTATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1632:HG3_PB_HySA_23248:HG2_10X_allpass_2419:HG4_PB_assemblyticsfalcon_8711:HG3_PB_assemblyticsfalcon_8829:HG2_PB_assemblyticsfalcon_8862:HG2_PB_assemblyticsPBcR_8584:HG4_Ill_Krunchall_21178:HG4_Ill_Spiral_1196:HG3_Ill_Spiral_15946:HG2_PB_HySA_28093:HG2_Ill_Spiral_1018:HG2_PB_pbsv_15444:HG4_PB_pbsv_15351:HG4_PB_SVrefine2PBcRDovetail_7656:HG4_PB_SVrefine2Falcon1Dovetail_9406:HG4_Ill_scalpel_14159:HG4_Ill_manta_3596:HG4_Ill_GATKHCSBGrefine_10584:HG4_10X_allpass_2824:HG3_PB_pbsv_15090:HG3_PB_SVrefine2PBcRDovetail_7248:HG3_PB_SVrefine2Falcon1Dovetail_9356:HG3_Ill_scalpel_14801:HG3_Ill_manta_3461:HG3_Ill_GATKHCSBGrefine_10131:HG3_10X_allpass_2976:HG2_PB_SVrefine2PBcRplusDovetail_3581:HG2_PB_SVrefine2PB10Xhap12_11146:HG2_PB_SVrefine2Falcon2Bionano_7642:HG2_PB_SVrefine2Falcon1plusDovetail_3823:HG2_Ill_scalpel_14543:HG2_Ill_manta_4242:HG2_Ill_SpiralSDKrefine_5563:HG2_Ill_SVrefine2DISCOVARplusDovetail_4248:HG2_Ill_GATKHCSBGrefine_10234:HG2_10X_SVrefine210Xhap12_10674:HG2_Ill_breakscan11_2221:HG4_Ill_MetaSV_1692:HG3_Ill_MetaSV_1752:HG2_Ill_tnscope_1685;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10674:HG2_Ill_GATKHCSBGrefine_10234:HG2_Ill_SVrefine2DISCOVARplusDovetail_4248:HG2_Ill_SpiralSDKrefine_5563:HG2_Ill_manta_4242:HG2_Ill_scalpel_14543:HG2_PB_SVrefine2Falcon1plusDovetail_3823:HG2_PB_SVrefine2Falcon2Bionano_7642:HG2_PB_SVrefine2PB10Xhap12_11146:HG2_PB_SVrefine2PBcRplusDovetail_3581:HG3_10X_allpass_2976:HG3_Ill_GATKHCSBGrefine_10131:HG3_Ill_manta_3461:HG3_Ill_scalpel_14801:HG3_PB_SVrefine2Falcon1Dovetail_9356:HG3_PB_SVrefine2PBcRDovetail_7248:HG3_PB_pbsv_15090:HG4_10X_allpass_2824:HG4_Ill_GATKHCSBGrefine_10584:HG4_Ill_manta_3596:HG4_Ill_scalpel_14159:HG4_PB_SVrefine2Falcon1Dovetail_9406:HG4_PB_SVrefine2PBcRDovetail_7656;NumExactMatchSVs=23;ClusterMaxShiftDist=0.1152;ClusterMaxSizeDiff=0.1152;ClusterMaxEditDist=0.128;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-319;DistForward=-299;DistMin=-319;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=15:58912849-58913183;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1233.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:50:1/1:4:23:2:18:1/1:0:9:0:21:1/1:0:30:1/1:0:10:.:.:.
chr15	59712886	HG2_PB_SVrefine2PBcRplusDovetail_3584	AAGGAAGGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1634:HG4_PB_HySA_22441:HG4_Ill_Krunchall_21186:HG3_Ill_Krunchall_20467:HG2_Ill_Krunchall_20869:HG4_PB_assemblyticsfalcon_8715:HG3_PB_assemblyticsfalcon_8836:HG2_PB_assemblyticsfalcon_8872:HG2_PB_assemblyticsPBcR_8594:HG4_Ill_Spiral_1197:HG3_Ill_Spiral_15954:HG2_PB_HySA_28103:HG4_PB_SVrefine2PBcRDovetail_7657:HG4_PB_SVrefine2Falcon1Dovetail_9407:HG4_Ill_svaba_19183:HG4_Ill_scalpel_14166:HG4_Ill_manta_3597:HG4_Ill_SVrefine2DISCOVARDovetail_10884:HG4_Ill_GATKHCSBGrefine_10585:HG4_10X_allpass_2825:HG3_PB_pbsv_15093:HG3_PB_SVrefine2PBcRDovetail_7250:HG3_PB_SVrefine2Falcon1Dovetail_9358:HG3_Ill_svaba_19353:HG3_Ill_scalpel_14807:HG3_Ill_manta_3462:HG3_Ill_SVrefine2DISCOVARDovetail_11060:HG3_Ill_MetaSV_1754:HG3_Ill_GATKHCSBGrefine_10132:HG3_10X_allpass_2977:HG2_PB_pbsv_15446:HG2_PB_SVrefine2PBcRplusDovetail_3584:HG2_PB_SVrefine2PB10Xhap12_11148:HG2_PB_SVrefine2Falcon2Bionano_7644:HG2_PB_SVrefine2Falcon1plusDovetail_3825:HG2_Ill_svaba_19209:HG2_Ill_scalpel_14549:HG2_Ill_manta_4243:HG2_Ill_breakscan11_2222:HG2_Ill_SVrefine2DISCOVARplusDovetail_4251:HG2_Ill_MetaSV_1635:HG2_Ill_GATKHCSBGrefine_10235:HG2_10X_allpass_2420:HG4_PB_pbsv_15352:HG4_Ill_MetaSV_1693:HG3_Ill_MetaSV_1753:HG2_Ill_tnscope_1686;NumClusterSVs=47;ExactMatchIDs=HG2_10X_allpass_2420:HG2_Ill_GATKHCSBGrefine_10235:HG2_Ill_MetaSV_1635:HG2_Ill_SVrefine2DISCOVARplusDovetail_4251:HG2_Ill_breakscan11_2222:HG2_Ill_manta_4243:HG2_Ill_scalpel_14549:HG2_Ill_svaba_19209:HG2_PB_SVrefine2Falcon1plusDovetail_3825:HG2_PB_SVrefine2Falcon2Bionano_7644:HG2_PB_SVrefine2PB10Xhap12_11148:HG2_PB_SVrefine2PBcRplusDovetail_3584:HG2_PB_pbsv_15446:HG3_10X_allpass_2977:HG3_Ill_GATKHCSBGrefine_10132:HG3_Ill_MetaSV_1754:HG3_Ill_SVrefine2DISCOVARDovetail_11060:HG3_Ill_manta_3462:HG3_Ill_scalpel_14807:HG3_Ill_svaba_19353:HG3_PB_SVrefine2Falcon1Dovetail_9358:HG3_PB_SVrefine2PBcRDovetail_7250:HG3_PB_pbsv_15093:HG4_10X_allpass_2825:HG4_Ill_GATKHCSBGrefine_10585:HG4_Ill_SVrefine2DISCOVARDovetail_10884:HG4_Ill_manta_3597:HG4_Ill_scalpel_14166:HG4_Ill_svaba_19183:HG4_PB_SVrefine2Falcon1Dovetail_9407:HG4_PB_SVrefine2PBcRDovetail_7657;NumExactMatchSVs=31;ClusterMaxShiftDist=0.0705521;ClusterMaxSizeDiff=0.0705521;ClusterMaxEditDist=0.0705521;PBcalls=17;Illcalls=27;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=18;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-740;DistForward=-320;DistMin=-740;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=15:59712887-59713229;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:66:1/1:0:34:0:27:1/1:0:32:0:23:1/1:0:41:./.:1:13:.:.:.
chr15	62624364	HG3_PB_pbsv_15111	CCCTCACCTCCCAGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCACTCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCTAGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGTGGCTGGCCGGGTGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCTGGGCGGGGGGCTGACCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGCGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGATGGGGCGGCCGGGCAGAGACGCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10687:HG3_PB_SVrefine2Falcon1Dovetail_9371:HG3_PB_assemblyticsfalcon_8871:HG4_PB_SVrefine2PBcRDovetail_7669:HG3_PB_SVrefine2PBcRDovetail_7260:HG2_10X_allpass_2421:HG4_PB_assemblyticsfalcon_8750:HG4_PB_SVrefine2Falcon1Dovetail_9422:HG4_Ill_manta_3603:HG3_PB_pbsv_15111:HG3_Ill_GATKHCSBGrefine_10148:HG2_PB_pbsv_15463:HG2_Ill_GATKHCSBGrefine_10245:HG4_Ill_MetaSV_1701:HG3_Ill_MetaSV_1762:HG2_Ill_MetaSV_1641:HG4_PB_HySA_22471:HG4_PB_pbsv_15372:HG3_PB_HySA_23290:HG2_PB_SVrefine2PB10Xhap12_11164:HG2_PB_SVrefine2Falcon2Bionano_7656;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10245:HG2_PB_pbsv_15463:HG3_Ill_GATKHCSBGrefine_10148:HG3_PB_pbsv_15111:HG4_Ill_manta_3603:HG4_PB_SVrefine2Falcon1Dovetail_9422:HG4_PB_assemblyticsfalcon_8750;NumExactMatchSVs=7;ClusterMaxShiftDist=0.204126;ClusterMaxSizeDiff=0.204126;ClusterMaxEditDist=0.204126;PBcalls=13;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-431;DistBack=-57;DistForward=-413;DistMin=-413;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=93;REFWIDENED=15:62624291-62624814;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1235.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:27:0|1:37:1:1:24:0|1:27:0:0:11:0/1:39:13:0/1:34:6:.:.:.
chr15	62706092	HG3_PB_SVrefine2Falcon1Dovetail_9372	TATTTTATTTTTGTCCCCTAGATTGAGTTTTGAAGGCAGGAACCAAGCCCTTTATTTATCTGGCAGTCTGAGGGTATGGTAAATGATTGGAGCCATCTGGCTGCAGTGGTCAAGGGAGATTGCCTTGGGAAGTTGAACTTGAGCTAGAGGCCAAGTGCACTGAATTTTGGTGTCTTTCCATGTGGTTTTGGCTGTGGCAGCTGGGCCATTACAACTTCATAATCACATGTCATATTGGTTGAACTCAGTGAAGTGTTAGCAAAAAAAAAAACTATATATATATATATATATATATATATAATTTGAGAAATTAAATCCTTTTAGATGATAGTAGGAACAAGTAAGTGGTGCTTGAGGTTTAATTTGATTTGAGAATGTGGGGGAGGAGAGTGAGCCTATGCTTTGATTTCAGTGGTAGAGCACTGGTGTTCCAAGGGGATTGTGTTTGAGAACCAGTGGGCTTAATCTTGCCACTGAATCCAGTAAGAAGCTAGTTTGTCCTTCAAGTAGAGGCTGAGGTGCTGTGTTCAGCAGGCTCCTCAAAGTGTAGTCCAGGACCAGTGGCAGCAGCAGTATCACCTGGGAACTTACTACAAATGCAAATTCTCCAACCTCACCCCCAAACTACTGAACCATACGCTCTGGGCTGGGGCTCAGGAACCGTTGTTTTAACAAGTTCTCAGGGGTGTTCTGCACACAGAGGTTTGAGAACCGCTGTCATACAGTATGTAACAGCAAAAGTGATTTGGACGTTCAGTCTAGTGGGTCATTTCCCAAAGCATTTCATGTTTGGTTGCCTTCTTGTTCTGGTAACACAAGCCAAGTTGATGGGGGTAAATAAAGTTAGATTTCCACTAGTGCTTAGTAATAAATTAATGACAGCTCCAAGGTCTGGCTGGACGGAACCCTCGAGTCTACCTCCAACTTGGCTCTAAAAGCAGACTCTGGTTGTGACCCAAGGAGGAGTAAATAAAAGAATTTTTCCTGTCAAGCATGCCTTTTAAAATTTTTATTATTTATTTATTTATTTATTATTGAAATGGAGTTTCGCTCTTGCTGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCCCTGCAACCTGTGCCTCCCAGGTTCAAGCAATTCTGCCTCAGCCCCCCGAGTAGCTGGGATTACAGGCGTGCACCACCATGCCCTGCCAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACCTCAGTTTCCCAAAGTGCTGGATTACAGGCGTGAGCCACTGTGTCAAGGATGCCTTTGATAGTCATGTTCCTATTAGGGACAGAGATGGACAGATTTCTGGGAGGAAAGGGTAGGAGAGGTGCCCGAACTGACTGACAGCCGTGCGAGTTTCTTCTGAGGAGACGTAGCAAGTGGCAGGGCTGAGACATGGATATGGATGTTTTTCACCTGTGTTCAGCTGGCTGCATGATAGCAAAAATGTTTGATGAACATTCTGCTGCTGAAAGGACTTTTTCATTGTAACAGTTGAAACAGAGCTCTCTGTTTAAGAAACGTTTCCTGGTGGAACAAATGATTCCAACTGAAACAAACTAAATGTTGAGATAGGATTTACTTTGACTTTGAGGGGAAAGAGGACAGCTAACAGTGCCCATTCATTTAACCCCTGCTTGCCCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_15112:HG3_PB_assemblyticsfalcon_8872:HG3_Ill_Krunchall_20491:HG2_Ill_tnscope_1687:HG4_PB_SVrefine2Falcon1Dovetail_9423:HG3_PB_SVrefine2Falcon1Dovetail_9372:HG3_Ill_SVrefine2DISCOVARDovetail_11070:HG3_Ill_MetaSV_1763:HG3_Ill_GATKHCSBGrefine_10149:HG3_10X_allpass_2978:HG2_PB_pbsv_15464:HG2_PB_SVrefine2PB10Xhap12_11165:HG2_PB_SVrefine2Falcon2Bionano_7657:HG2_Ill_breakscan11_2223:HG2_Ill_SpiralSDKrefine_5591:HG2_Ill_MetaSV_1642:HG2_10X_SVrefine210Xhap12_10688;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10688:HG2_Ill_MetaSV_1642:HG2_Ill_SpiralSDKrefine_5591:HG2_Ill_breakscan11_2223:HG2_PB_SVrefine2Falcon2Bionano_7657:HG2_PB_SVrefine2PB10Xhap12_11165:HG2_PB_pbsv_15464:HG3_10X_allpass_2978:HG3_Ill_GATKHCSBGrefine_10149:HG3_Ill_MetaSV_1763:HG3_Ill_SVrefine2DISCOVARDovetail_11070:HG3_PB_SVrefine2Falcon1Dovetail_9372:HG4_PB_SVrefine2Falcon1Dovetail_9423;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00117578;ClusterMaxSizeDiff=0.00117578;ClusterMaxEditDist=0.00411644;PBcalls=7;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-1700;DistBack=81265;DistForward=-1700;DistMin=-1700;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=15:62706093-62707795;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1236.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:44:45:./.:17:13:20:13:0|1:44:0:0:21:0/1:51:9:0/1:142:64:1646:.:.
chr15	64633163	HG2_PB_SVrefine2PB10Xhap12_11173	ACCACCACGTCCAGCTAATTTTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGGTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCAATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10695:HG2_PB_HySA_28155:HG3_PB_assemblyticsfalcon_8890:HG2_PB_assemblyticsPBcR_8640:HG4_PB_assemblyticsfalcon_8766:HG2_PB_assemblyticsfalcon_8920:HG4_Ill_Krunchall_21224:HG3_Ill_Krunchall_20505:HG3_PB_pbsv_15124:HG3_PB_HySA_23313:HG4_PB_HySA_22488:HG4_PB_pbsv_15380:HG2_PB_pbsv_15472:HG4_Ill_MetaSV_1702:HG3_Ill_MetaSV_1767:HG2_Ill_tnscope_1688:HG2_Ill_MetaSV_1645:HG4_Ill_manta_3608:HG4_Ill_GATKHCSBGrefine_10605:HG4_10X_allpass_2829:HG3_Ill_scalpel_14844:HG3_Ill_manta_3470:HG3_Ill_GATKHCSBGrefine_10160:HG3_10X_allpass_2981:HG2_Ill_manta_4251:HG2_Ill_GATKHCSBGrefine_10253:HG2_10X_allpass_2423:HG2_Ill_breakscan11_2226:HG4_PB_SVrefine2PBcRDovetail_7674:HG4_PB_SVrefine2Falcon1Dovetail_9429:HG4_Ill_SVrefine2DISCOVARDovetail_10905:HG3_PB_SVrefine2PBcRDovetail_7266:HG3_PB_SVrefine2Falcon1Dovetail_9379:HG3_Ill_SVrefine2DISCOVARDovetail_11087:HG2_PB_SVrefine2PBcRplusDovetail_3601:HG2_PB_SVrefine2PB10Xhap12_11173:HG2_PB_SVrefine2Falcon2Bionano_7662:HG2_PB_SVrefine2Falcon1plusDovetail_3846:HG2_Ill_SVrefine2DISCOVARplusDovetail_4279;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10695:HG4_PB_SVrefine2PBcRDovetail_7674:HG4_PB_SVrefine2Falcon1Dovetail_9429:HG4_Ill_SVrefine2DISCOVARDovetail_10905:HG3_PB_SVrefine2PBcRDovetail_7266:HG3_PB_SVrefine2Falcon1Dovetail_9379:HG3_Ill_SVrefine2DISCOVARDovetail_11087:HG2_PB_SVrefine2PBcRplusDovetail_3601:HG2_PB_SVrefine2PB10Xhap12_11173:HG2_PB_SVrefine2Falcon2Bionano_7662:HG2_PB_SVrefine2Falcon1plusDovetail_3846:HG2_Ill_SVrefine2DISCOVARplusDovetail_4279;NumExactMatchSVs=12;ClusterMaxShiftDist=0.24337;ClusterMaxSizeDiff=0.24337;ClusterMaxEditDist=0.24337;PBcalls=18;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=18870;DistForward=-296;DistMin=-296;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=15:64633164-64633518;PctSeqSimilarity=0.9697;PctSizeSimilarity=1;PctRecOverlap=0.954;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=0;TruScore=97;MatchId=1237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:66:1/1:0:20:1:19:./.:4:22:6:9:0/1:7:30:0/1:7:12:.:.:.
chr15	64664107	HG2_10X_allpass_2424	TTTTTAACCCACCTCCTGCACAAAAAATGGTCAATTTTTAAGTTGTAAAAATTATTCAACATGTACAAAGTCACCTCTTAATTTCAAGATTAATCAAATACGCCTTCAAAGGAAATCAAC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1020:HG3_PB_assemblyticsfalcon_8892:HG2_PB_assemblyticsPBcR_8642:HG4_PB_assemblyticsfalcon_8768:HG2_PB_assemblyticsfalcon_8922:HG4_PB_pbsv_15381:HG4_Ill_Krunchall_21226:HG3_Ill_Krunchall_20506:HG2_Ill_Krunchall_20913:HG2_PB_HySA_28157:HG3_PB_pbsv_15125:HG2_PB_pbsv_15473:HG4_PB_SVrefine2PBcRDovetail_7675:HG4_PB_SVrefine2Falcon1Dovetail_9430:HG4_Ill_scalpel_14200:HG4_Ill_manta_3609:HG4_Ill_SVrefine2DISCOVARDovetail_10906:HG4_Ill_MetaSV_1703:HG4_Ill_GATKHC_24547:HG4_Ill_GATKHCSBGrefine_10606:HG4_Ill_Cortex_1193:HG4_Ill_250bpfermikitraw_20236:HG4_10X_allpass_2830:HG3_PB_SVrefine2PBcRDovetail_7267:HG3_PB_SVrefine2Falcon1Dovetail_9380:HG3_Ill_scalpel_14846:HG3_Ill_manta_3471:HG3_Ill_SVrefine2DISCOVARDovetail_11088:HG3_Ill_MetaSV_1768:HG3_Ill_GATKHC_24489:HG3_Ill_GATKHCSBGrefine_10161:HG3_Ill_Cortex_1242:HG3_Ill_250bpfermikitraw_19961:HG3_10X_allpass_2982:HG2_PB_SVrefine2PBcRplusDovetail_3602:HG2_PB_SVrefine2PB10Xhap12_11174:HG2_PB_SVrefine2Falcon2Bionano_7663:HG2_PB_SVrefine2Falcon1plusDovetail_3847:HG2_Ill_scalpel_14583:HG2_Ill_manta_4252:HG2_Ill_breakscan11_2227:HG2_Ill_SVrefine2DISCOVARplusDovetail_4280:HG2_Ill_MetaSV_1646:HG2_Ill_GATKHC_24638:HG2_Ill_GATKHCSBGrefine_10254:HG2_Ill_Cortex_2895:HG2_Ill_250bpfermikitraw_20560:HG2_10X_allpass_2424:HG2_10X_SVrefine210Xhap12_10696:HG4_PB_HySA_22490:HG3_PB_HySA_23315;NumClusterSVs=51;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10696:HG2_10X_allpass_2424:HG2_Ill_250bpfermikitraw_20560:HG2_Ill_Cortex_2895:HG2_Ill_GATKHCSBGrefine_10254:HG2_Ill_GATKHC_24638:HG2_Ill_MetaSV_1646:HG2_Ill_SVrefine2DISCOVARplusDovetail_4280:HG2_Ill_breakscan11_2227:HG2_Ill_manta_4252:HG2_Ill_scalpel_14583:HG2_PB_SVrefine2Falcon1plusDovetail_3847:HG2_PB_SVrefine2Falcon2Bionano_7663:HG2_PB_SVrefine2PB10Xhap12_11174:HG2_PB_SVrefine2PBcRplusDovetail_3602:HG3_10X_allpass_2982:HG3_Ill_250bpfermikitraw_19961:HG3_Ill_Cortex_1242:HG3_Ill_GATKHCSBGrefine_10161:HG3_Ill_GATKHC_24489:HG3_Ill_MetaSV_1768:HG3_Ill_SVrefine2DISCOVARDovetail_11088:HG3_Ill_manta_3471:HG3_Ill_scalpel_14846:HG3_PB_SVrefine2Falcon1Dovetail_9380:HG3_PB_SVrefine2PBcRDovetail_7267:HG4_10X_allpass_2830:HG4_Ill_250bpfermikitraw_20236:HG4_Ill_Cortex_1193:HG4_Ill_GATKHCSBGrefine_10606:HG4_Ill_GATKHC_24547:HG4_Ill_MetaSV_1703:HG4_Ill_SVrefine2DISCOVARDovetail_10906:HG4_Ill_manta_3609:HG4_Ill_scalpel_14200:HG4_PB_SVrefine2Falcon1Dovetail_9430:HG4_PB_SVrefine2PBcRDovetail_7675;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0251046;ClusterMaxSizeDiff=0.0251046;ClusterMaxEditDist=0.0672269;PBcalls=18;Illcalls=29;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=25;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=15;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-119;DistBack=28672;DistForward=47442;DistMin=28672;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=69;REFWIDENED=15:64664108-64664295;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:1/1:2:14:1:22:1/1:0:16:0:9:1/1:0:44:./.:.:.:.:.:.
chr15	65618415	HG2_PB_SVrefine2PB10Xhap12_11178	ACCCAGGCTTTCAAATTCAGCAGTAGCTGCATTATACTGCTGCCTCTTACTAAGCTTGAGGCCAGCTGAGACCTTCGGATCTTTGTCAGCATAACTGCCATTAAGCCCAGCCTCTCTCGAACCTAAGCCATAGCAGCTCCAGGCAACTGGCTTCAGGAGCCTGGACTGAGAGACAATGGCAGAACAGAGAGGCCTGGCCGGAGTCCTGGCTGAGTGCCCTGGAGGGAATCACTCAGTCACAGCCTGTTTCCTCAGCTTCAGAACCGGGAGGAAACCAGTCCTTCCTCATAGACAGTGCGTGAAAAGCACACAGCCCTGCCTGGCCAGCACCTGGAGAGCGCTTAACCTTGGCGGGCTGAGCGAGCAGCCGCCTCGCTGCTGGCCGAGGAGGGGTGGG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_1021:HG4_Ill_MetaSV_1705:HG2_PB_HySA_28166:HG2_Ill_tnscope_1689:HG4_PB_pbsv_15384:HG4_PB_SVrefine2Falcon1Dovetail_9432:HG4_Ill_manta_3611:HG4_Ill_GATKHCSBGrefine_10608:HG4_10X_allpass_2832:HG2_PB_pbsv_15476:HG2_PB_assemblyticsfalcon_8931:HG2_PB_SVrefine2PBcRplusDovetail_3605:HG2_PB_SVrefine2PB10Xhap12_11178:HG2_PB_SVrefine2Falcon1plusDovetail_3849:HG2_Ill_manta_4254:HG2_Ill_breakscan11_2228:HG2_Ill_SpiralSDKrefine_5608:HG2_Ill_GATKHCSBGrefine_10257:HG2_10X_allpass_2426:HG2_10X_SVrefine210Xhap12_10703:HG4_Ill_Krunchall_21232:HG2_Ill_Krunchall_20921:HG2_PB_SVrefine2PB10Xhap12_11177:HG2_PB_PB10Xdip_10766:HG2_PB_PB10Xdip_10765:HG4_PB_assemblyticsfalcon_8776:HG2_PB_assemblyticsPBcR_8649:HG4_Ill_Spiral_1201;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10703:HG2_10X_allpass_2426:HG2_Ill_GATKHCSBGrefine_10257:HG2_Ill_SpiralSDKrefine_5608:HG2_Ill_breakscan11_2228:HG2_Ill_manta_4254:HG2_PB_SVrefine2Falcon1plusDovetail_3849:HG2_PB_SVrefine2PB10Xhap12_11178:HG2_PB_SVrefine2PBcRplusDovetail_3605:HG2_PB_assemblyticsfalcon_8931:HG2_PB_pbsv_15476:HG4_10X_allpass_2832:HG4_Ill_GATKHCSBGrefine_10608:HG4_Ill_manta_3611:HG4_PB_SVrefine2Falcon1Dovetail_9432:HG4_PB_pbsv_15384;NumExactMatchSVs=16;ClusterMaxShiftDist=0.204604;ClusterMaxSizeDiff=0.204604;ClusterMaxEditDist=0.204604;PBcalls=13;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-396;DistBack=-1;DistForward=-397;DistMin=-397;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=15:65618416-65618811;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1239.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:21:38:0|1:16:0:3:31:1|0:1:34:40:0:0/1:57:8:0/1:33:9:.:.:.
chr15	66332076	HG4_PB_SVrefine2Falcon1Dovetail_9433	CTGAGGGTTCTGAGCCGGGTCAGGCGGCGGTGGGGTGACGGTCCTGAGCCGGGTCAGGCGGCGGTGGGGTGACGGTCCTGAGCCGGGTCAGGCGGCGGTGGGGTGACGGTCCTGAGCCGGGTCAGGCGGCGGTGGGGTGACGGTCCTGAGCCGGGTCAGGCGGCGGTGGGG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10707:HG4_PB_pbsv_15386:HG3_PB_pbsv_15129:HG2_PB_pbsv_15478:HG3_Ill_GATKHCSBGrefine_10168:HG3_10X_allpass_2984:HG4_Ill_250bpfermikitraw_20248:HG4_Ill_150bpfermikitraw_19505:HG2_Ill_SpiralSDKrefine_5613:HG2_Ill_GATKHCSBGrefine_10259:HG2_Ill_250bpfermikitraw_20577:HG2_Ill_150bpfermikitraw_19408:HG4_Ill_Spiral_1202:HG3_PB_SVrefine2PBcRDovetail_7270:HG4_PB_SVrefine2PBcRDovetail_7677:HG4_PB_SVrefine2Falcon1Dovetail_9433:HG4_Ill_SVrefine2DISCOVARDovetail_10915:HG3_PB_SVrefine2Falcon1Dovetail_9382:HG3_Ill_SVrefine2DISCOVARDovetail_11094:HG2_PB_SVrefine2PBcRplusDovetail_3606:HG2_PB_SVrefine2PB10Xhap12_11179:HG2_PB_SVrefine2Falcon2Bionano_7665:HG2_PB_SVrefine2Falcon1plusDovetail_3850:HG2_Ill_SVrefine2DISCOVARplusDovetail_4291;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10707:HG4_PB_SVrefine2PBcRDovetail_7677:HG4_PB_SVrefine2Falcon1Dovetail_9433:HG4_Ill_SVrefine2DISCOVARDovetail_10915:HG3_PB_SVrefine2Falcon1Dovetail_9382:HG3_Ill_SVrefine2DISCOVARDovetail_11094:HG2_PB_SVrefine2PBcRplusDovetail_3606:HG2_PB_SVrefine2PB10Xhap12_11179:HG2_PB_SVrefine2Falcon2Bionano_7665:HG2_PB_SVrefine2Falcon1plusDovetail_3850:HG2_Ill_SVrefine2DISCOVARplusDovetail_4291;NumExactMatchSVs=11;ClusterMaxShiftDist=0.186667;ClusterMaxSizeDiff=0.186667;ClusterMaxEditDist=0.186667;PBcalls=11;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-170;DistBack=18717;DistForward=-62;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=110;REFWIDENED=15:66332111-66332356;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0.9532;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=97;MatchId=1240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:62:1/1:0:20:3:20:./.:6:3:5:1:0/1:6:33:./.:.:.:.:.:.
chr15	66633812	HG3_PB_SVrefine2PBcRDovetail_7273	TAAGAATGTTGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2229:HG2_10X_allpass_2427:HG4_PB_assemblyticsfalcon_8786:HG2_PB_assemblyticsPBcR_8660:HG3_PB_assemblyticsfalcon_8909:HG2_PB_assemblyticsfalcon_8943:HG4_Ill_Krunchall_21240:HG3_Ill_Krunchall_20522:HG2_Ill_Krunchall_20929:HG2_PB_pbsv_15480:HG3_PB_pbsv_15131:HG4_PB_HySA_22511:HG4_Ill_MetaSV_1707:HG3_PB_HySA_23334:HG3_Ill_MetaSV_1771:HG2_PB_HySA_28173:HG2_Ill_tnscope_1690:HG2_Ill_MetaSV_1649:HG4_PB_pbsv_15388:HG4_PB_SVrefine2PBcRDovetail_7680:HG4_PB_SVrefine2Falcon1Dovetail_9436:HG4_Ill_scalpel_14211:HG4_Ill_manta_3613:HG4_Ill_SVrefine2DISCOVARDovetail_10919:HG4_Ill_GATKHCSBGrefine_10612:HG4_10X_allpass_2833:HG3_PB_SVrefine2PBcRDovetail_7273:HG3_PB_SVrefine2Falcon1Dovetail_9385:HG3_Ill_scalpel_14860:HG3_Ill_manta_3474:HG3_Ill_SVrefine2DISCOVARDovetail_11097:HG3_Ill_GATKHCSBGrefine_10170:HG3_10X_allpass_2985:HG2_PB_SVrefine2PBcRplusDovetail_3609:HG2_PB_SVrefine2PB10Xhap12_11182:HG2_PB_SVrefine2Falcon2Bionano_7668:HG2_PB_SVrefine2Falcon1plusDovetail_3853:HG2_Ill_scalpel_14596:HG2_Ill_manta_4256:HG2_Ill_SVrefine2DISCOVARplusDovetail_4295:HG2_Ill_GATKHCSBGrefine_10261:HG2_10X_SVrefine210Xhap12_10709;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10709:HG2_Ill_GATKHCSBGrefine_10261:HG2_Ill_SVrefine2DISCOVARplusDovetail_4295:HG2_Ill_manta_4256:HG2_Ill_scalpel_14596:HG2_PB_SVrefine2Falcon1plusDovetail_3853:HG2_PB_SVrefine2Falcon2Bionano_7668:HG2_PB_SVrefine2PB10Xhap12_11182:HG2_PB_SVrefine2PBcRplusDovetail_3609:HG3_10X_allpass_2985:HG3_Ill_GATKHCSBGrefine_10170:HG3_Ill_SVrefine2DISCOVARDovetail_11097:HG3_Ill_manta_3474:HG3_Ill_scalpel_14860:HG3_PB_SVrefine2Falcon1Dovetail_9385:HG3_PB_SVrefine2PBcRDovetail_7273:HG4_10X_allpass_2833:HG4_Ill_GATKHCSBGrefine_10612:HG4_Ill_SVrefine2DISCOVARDovetail_10919:HG4_Ill_manta_3613:HG4_Ill_scalpel_14211:HG4_PB_SVrefine2Falcon1Dovetail_9436:HG4_PB_SVrefine2PBcRDovetail_7680:HG4_PB_pbsv_15388;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0726698;ClusterMaxSizeDiff=0.0726698;ClusterMaxEditDist=0.0726698;PBcalls=18;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=32379;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=15:66633813-66634145;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:59:1/1:0:20:0:23:1/1:0:19:0:18:1/1:0:54:0/1:3:10:.:.:.
chr15	67083772	HG2_PB_SVrefine2Falcon2Bionano_7671	CCCCATCTCTACAAAAATACAAAAATTAACTGTGTGTAGTGGTATGTGTGTGTGGTCCCAGCTACTCAGGAGGGTGGAGGCAGGAGGATCGCTTGAGCCTGGGAGGTCAAGGCTGCAGTGAACCTCTTGGCCAAACTATCAACTGTAGGTTGTACCAACTAGGCTGGCCATTCAGGAGAAGTAAGAAGTACAAGGCCCAGGAATTGTTAGAGCAGAATCTCAAATTTTCAAAATTGATTTTTTTTTCTTTTTTTTTTGAAGCCAAGGTCCTCACCTTGGTGCCCAGGCTAGAATGCAG	TCCA	20	PASS	ClusterIDs=HG2_Ill_Krunchall_20936:HG4_Ill_GATKHCSBGrefine_10613:HG3_Ill_GATKHCSBGrefine_10172:HG2_Ill_GATKHCSBGrefine_10262:HG2_PB_PB10Xdip_10778:HG2_PB_PB10Xdip_10777:HG3_PB_HySA_23341:HG2_PB_HySA_28187:HG4_Ill_svaba_19242:HG4_Ill_scalpel_14217:HG4_10X_allpass_2834:HG3_Ill_svaba_19411:HG2_Ill_svaba_19266:HG2_Ill_scalpel_14599:HG2_10X_allpass_2428:HG3_Ill_Krunchall_20530:HG2_Ill_tnscope_1691:HG2_Ill_SpiralSDKrefine_5617:HG4_PB_SVrefine2PBcRDovetail_7683:HG4_PB_SVrefine2Falcon1Dovetail_9438:HG4_Ill_manta_3615:HG4_Ill_SVrefine2DISCOVARDovetail_10921:HG3_PB_assemblyticsfalcon_8918:HG3_PB_SVrefine2Falcon1Dovetail_9388:HG3_Ill_manta_3475:HG3_Ill_SVrefine2DISCOVARDovetail_11100:HG2_PB_assemblyticsfalcon_8949:HG2_PB_SVrefine2PBcRplusDovetail_3612:HG2_PB_SVrefine2PB10Xhap12_11187:HG2_PB_SVrefine2Falcon2Bionano_7671:HG2_PB_SVrefine2Falcon1plusDovetail_3856:HG2_Ill_manta_4257:HG2_Ill_SVrefine2DISCOVARplusDovetail_4297:HG2_10X_SVrefine210Xhap12_10711:HG4_Ill_MetaSV_1708:HG2_Ill_MetaSV_1650:HG4_Ill_Spiral_1203:HG3_Ill_Spiral_15999:HG2_Ill_Spiral_1022:HG3_Ill_MetaSV_1772:HG4_PB_assemblyticsfalcon_8791:HG2_PB_assemblyticsPBcR_8668:HG4_PB_pbsv_15392:HG4_Ill_Krunchall_21250:HG3_PB_pbsv_15137:HG3_Ill_Krunchall_20529:HG2_PB_pbsv_15486;NumClusterSVs=47;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10711:HG2_Ill_SVrefine2DISCOVARplusDovetail_4297:HG2_Ill_manta_4257:HG2_PB_SVrefine2Falcon1plusDovetail_3856:HG2_PB_SVrefine2Falcon2Bionano_7671:HG2_PB_SVrefine2PB10Xhap12_11187:HG2_PB_SVrefine2PBcRplusDovetail_3612:HG2_PB_assemblyticsfalcon_8949:HG3_Ill_SVrefine2DISCOVARDovetail_11100:HG3_Ill_manta_3475:HG3_PB_SVrefine2Falcon1Dovetail_9388:HG3_PB_assemblyticsfalcon_8918:HG4_Ill_SVrefine2DISCOVARDovetail_10921:HG4_Ill_manta_3615:HG4_PB_SVrefine2Falcon1Dovetail_9438:HG4_PB_SVrefine2PBcRDovetail_7683;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0477816;ClusterMaxSizeDiff=0.0477816;ClusterMaxEditDist=0.0477816;PBcalls=18;Illcalls=26;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=22;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-294;DistBack=50115;DistForward=-296;DistMin=-296;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=15:67083772-67084069;PctSeqSimilarity=0.9823;PctSizeSimilarity=0.9966;PctRecOverlap=0.9765;SizeDiff=1;StartDistance=3;EndDistance=7;GTMatch=0;TruScore=98;MatchId=1242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:48:./.:0:2:0:1:1/1:0:21:0:17:1/1:0:37:./.:.:.:.:.:.
chr15	68063458	HG2_Ill_GATKHC_24675	AACACATGGTAATGTGTACCATGTGTTTTACACATGGTAATGTGTACCATGTGTTTT	A	20	PASS	ClusterIDs=HG4_Ill_Spiral_1204:HG3_PB_HySA_23353:HG2_PB_HySA_28197:HG3_PB_assemblyticsfalcon_8928:HG3_PB_pbsv_15140:HG2_PB_pbsv_15491:HG4_PB_pbsv_15396:HG4_PB_assemblyticsfalcon_8797:HG4_PB_SVrefine2PBcRDovetail_7686:HG4_PB_HySA_22525:HG4_Ill_svaba_19246:HG4_Ill_scalpel_14222:HG4_Ill_manta_3617:HG4_Ill_SVrefine2DISCOVARDovetail_10925:HG4_Ill_Krunchall_21255:HG4_Ill_GATKHC_24583:HG4_Ill_GATKHCSBGrefine_10616:HG4_Ill_250bpfermikitraw_20258:HG4_Ill_150bpfermikitraw_19519:HG4_10X_allpass_2836:HG3_PB_SVrefine2PBcRDovetail_7279:HG3_Ill_svaba_19415:HG3_Ill_scalpel_14870:HG3_Ill_manta_3476:HG3_Ill_SVrefine2DISCOVARDovetail_11103:HG3_Ill_Krunchall_20535:HG3_Ill_GATKHC_24531:HG3_Ill_GATKHCSBGrefine_10173:HG3_Ill_250bpfermikitraw_19989:HG3_Ill_150bpfermikitraw_19453:HG2_PB_SVrefine2PBcRplusDovetail_3615:HG2_PB_SVrefine2PB10Xhap12_11191:HG2_PB_SVrefine2Falcon2Bionano_7676:HG2_PB_SVrefine2Falcon1plusDovetail_3861:HG2_Ill_svaba_19271:HG2_Ill_scalpel_14604:HG2_Ill_manta_4260:HG2_Ill_SpiralSDKrefine_5622:HG2_Ill_SVrefine2DISCOVARplusDovetail_4298:HG2_Ill_Krunchall_20942:HG2_Ill_GATKHC_24675:HG2_Ill_GATKHCSBGrefine_10264:HG2_Ill_250bpfermikitraw_20590:HG2_Ill_150bpfermikitraw_19421:HG2_10X_SVrefine210Xhap12_10716;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10716:HG2_Ill_150bpfermikitraw_19421:HG2_Ill_250bpfermikitraw_20590:HG2_Ill_GATKHCSBGrefine_10264:HG2_Ill_GATKHC_24675:HG2_Ill_Krunchall_20942:HG2_Ill_SVrefine2DISCOVARplusDovetail_4298:HG2_Ill_SpiralSDKrefine_5622:HG2_Ill_manta_4260:HG2_Ill_scalpel_14604:HG2_Ill_svaba_19271:HG2_PB_SVrefine2Falcon1plusDovetail_3861:HG2_PB_SVrefine2Falcon2Bionano_7676:HG2_PB_SVrefine2PB10Xhap12_11191:HG2_PB_SVrefine2PBcRplusDovetail_3615:HG3_Ill_150bpfermikitraw_19453:HG3_Ill_250bpfermikitraw_19989:HG3_Ill_GATKHCSBGrefine_10173:HG3_Ill_GATKHC_24531:HG3_Ill_Krunchall_20535:HG3_Ill_SVrefine2DISCOVARDovetail_11103:HG3_Ill_manta_3476:HG3_Ill_scalpel_14870:HG3_Ill_svaba_19415:HG3_PB_SVrefine2PBcRDovetail_7279:HG4_10X_allpass_2836:HG4_Ill_150bpfermikitraw_19519:HG4_Ill_250bpfermikitraw_20258:HG4_Ill_GATKHCSBGrefine_10616:HG4_Ill_GATKHC_24583:HG4_Ill_Krunchall_21255:HG4_Ill_SVrefine2DISCOVARDovetail_10925:HG4_Ill_manta_3617:HG4_Ill_scalpel_14222:HG4_Ill_svaba_19246:HG4_PB_HySA_22525:HG4_PB_SVrefine2PBcRDovetail_7686:HG4_PB_assemblyticsfalcon_8797;NumExactMatchSVs=38;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0357143;PBcalls=14;Illcalls=29;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=28;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=9339;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=41;REFWIDENED=15:68063459-68063555;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1243.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:73:1/1:1:29:2:28:1/1:0:11:0:27:1/1:0:59:./.:.:.:.:.:.
chr15	68426002	HG3_Ill_MetaSV_1773	ACTGAAATTTAGATTTTTATTTTTATTTTTTATTTTTTTTTTTGTTTTTTTAATTTAATTTTATTTTATTTTATTTATTTATTTTTTTTAATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGAGTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCAGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGATTCTTAACGAGCATGCTGCCTTCAAGTATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACGGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTGGTACAGAACAGAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCCCAATCTTTTCCCCACCTTTCCCCCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCGTTCTCAATGAGCTGTTGGGTACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACATCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCATCTCCCAGACGAGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCAGACAGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACCACCCAGTAGGAGCGGCTGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACTGCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGATCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCCCACCCCCCAGACGGGGCGGCTGGCCGGGCGGGGGGCTAACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGATGACCCCCCCACCTCCCTCCCGGAAGGGGTGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAGGCCCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCGCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCCCACCTCCCAGCAGGGGTGGCTGGGCAGAGGCGCCCCCCACCCCCCGGACGGGGCGGCCGGCCGGGGGGGCTAACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGTGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCTGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGAAGGGGTGGCTGGCCGGGCGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGAGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAGGCCCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACACCGCCCTCCCAGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCCCACCTCCCAGCAGGGGTGGCTGGGCAGAGGCGCCCCCCACCCCCCGGACGGGGCGGCTGGCCGGGGGGGGCTAACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGTGAACGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGTGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGGCCTGGCGGGGGCTGACCCCCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGACAGGGTGGCTGCCGGGCGTAGGGGCTCCTCACTTCTCAGACGGGGCGGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGCAGTTGCCAGGCGGAGGGTCTCCTCACTTCTCAGATGGGGCGGCCGGGCAGAGATGCTCCTCACCTCCCAGACGGGGTCGCGGCCGGATGCTCTCACATCCCAGACGGGGCCGCGGGGCAGAGGCGCTCCCCACATCTCAGGCGATGGGCGGCCGGGCAGAGACGCTCCTTACTTCCTAGATGGGATGGTGGCCGGGAAGAGGTGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTCCCAGACGGGATGGCGGCCGGGAAGAGGCACTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACGTCCCAGACGATGGGTGGCCAGGCAGAGATGCTCCTCACTTCCCAGAAGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCGAGCCGAGGTCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACCAGACTCCGTCTGCAATCCCGGCGCCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAAAAGTAAGAAAACCAGTCAGGCGTGGTGGCGCGCTACAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTCGGCTCGGCATCAGAGGGAGACCGTGGAAAGAG	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2230:HG2_10X_allpass_2430:HG3_10X_allpass_2986:HG4_10X_allpass_2839:HG3_PB_assemblyticsfalcon_8932:HG2_PB_assemblyticsPBcR_8683:HG4_PB_assemblyticsfalcon_8802:HG2_PB_assemblyticsfalcon_8964:HG3_Ill_Krunchall_20540:HG2_Ill_Krunchall_20950:HG2_Ill_tnscope_1693:HG4_PB_pbsv_15397:HG4_PB_SVrefine2PBcRDovetail_7687:HG4_Ill_SVrefine2DISCOVARDovetail_10927:HG4_Ill_MetaSV_1712:HG3_PB_pbsv_15143:HG3_PB_SVrefine2PBcRDovetail_7282:HG3_Ill_SVrefine2DISCOVARDovetail_11106:HG3_Ill_MetaSV_1773:HG2_PB_pbsv_15493:HG2_PB_SVrefine2PBcRplusDovetail_3617:HG2_PB_SVrefine2PB10Xhap12_11193:HG2_PB_SVrefine2Falcon2Bionano_7678:HG2_PB_SVrefine2Falcon1plusDovetail_3863:HG2_Ill_SpiralSDKrefine_5626:HG2_Ill_SVrefine2DISCOVARplusDovetail_4299:HG2_Ill_MetaSV_1654:HG2_10X_SVrefine210Xhap12_10719;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10719:HG2_Ill_MetaSV_1654:HG2_Ill_SVrefine2DISCOVARplusDovetail_4299:HG2_Ill_SpiralSDKrefine_5626:HG2_PB_SVrefine2Falcon1plusDovetail_3863:HG2_PB_SVrefine2Falcon2Bionano_7678:HG2_PB_SVrefine2PB10Xhap12_11193:HG2_PB_SVrefine2PBcRplusDovetail_3617:HG2_PB_pbsv_15493:HG3_Ill_MetaSV_1773:HG3_Ill_SVrefine2DISCOVARDovetail_11106:HG3_PB_SVrefine2PBcRDovetail_7282:HG3_PB_pbsv_15143:HG4_Ill_MetaSV_1712:HG4_Ill_SVrefine2DISCOVARDovetail_10927:HG4_PB_SVrefine2PBcRDovetail_7687:HG4_PB_pbsv_15397;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0119966;ClusterMaxSizeDiff=0.0119966;ClusterMaxEditDist=0.0119966;PBcalls=13;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2925;DistBack=14426;DistForward=42974;DistMin=14426;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=15:68426003-68428945;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:116:1/1:0:35:1:26:1/1:0:24:0:27:1/1:0:60:1/1:1:211:2912:.:.
chr15	68713339	HG2_Ill_manta_4263	CTGCCTGAGGTTTGGTGGGCAGGATGCCGGAGTGTGTGCTGTGAGGAATGGTAAGAACAGAACAGTGGGCTGAGGCCTCTGAGAGGAAACCGAAAGCCAACTAAGGCATTTGGATTTAGCAGATGGGAGCCATGGAAGGTTTTTGAGGGAGAGCAGTGACATGTTCTATCTGTGCTTGGAGGAGCTTCCTCAGGTGGGAGGGGGAGGCTGGATACAGCAG	GA	20	PASS	ClusterIDs=HG2_Ill_Krunchall_20958:HG4_Ill_GATKHCSBGrefine_10619:HG3_Ill_GATKHCSBGrefine_10178:HG2_Ill_GATKHCSBGrefine_10270:HG2_PB_HySA_28211:HG2_Ill_SpiralSDKrefine_5629:HG4_PB_assemblyticsfalcon_8805:HG4_PB_SVrefine2PBcRDovetail_7690:HG4_PB_SVrefine2Falcon1Dovetail_9444:HG4_Ill_manta_3620:HG4_Ill_SVrefine2DISCOVARDovetail_10931:HG3_PB_SVrefine2PBcRDovetail_7285:HG3_Ill_manta_3478:HG3_Ill_SVrefine2DISCOVARDovetail_11109:HG2_PB_assemblyticsfalcon_8968:HG2_PB_SVrefine2PBcRplusDovetail_3620:HG2_PB_SVrefine2PB10Xhap12_11196:HG2_PB_SVrefine2Falcon2Bionano_7681:HG2_PB_SVrefine2Falcon1plusDovetail_3866:HG2_PB_PB10Xdip_10789:HG2_PB_PB10Xdip_10788:HG2_Ill_manta_4263:HG2_Ill_SVrefine2DISCOVARplusDovetail_4303:HG2_10X_SVrefine210Xhap12_10724:HG2_Ill_MetaSV_1655:HG4_Ill_Spiral_1205:HG3_Ill_Spiral_16006:HG2_Ill_Spiral_1023:HG4_Ill_MetaSV_1713:HG4_10X_allpass_2840:HG3_Ill_MetaSV_1774:HG3_10X_allpass_2987:HG2_10X_allpass_2431:HG4_Ill_scalpel_14229:HG3_Ill_scalpel_14882:HG2_Ill_scalpel_14617:HG3_PB_assemblyticsfalcon_8935:HG2_PB_assemblyticsPBcR_8685:HG4_PB_HySA_22533:HG3_PB_HySA_23365:HG4_PB_pbsv_15404:HG3_PB_pbsv_15148:HG2_PB_pbsv_15498:HG4_Ill_Krunchall_21265:HG3_Ill_Krunchall_20547;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10724:HG2_Ill_SVrefine2DISCOVARplusDovetail_4303:HG2_Ill_manta_4263:HG2_PB_PB10Xdip_10788:HG2_PB_PB10Xdip_10789:HG2_PB_SVrefine2Falcon1plusDovetail_3866:HG2_PB_SVrefine2Falcon2Bionano_7681:HG2_PB_SVrefine2PB10Xhap12_11196:HG2_PB_SVrefine2PBcRplusDovetail_3620:HG2_PB_assemblyticsfalcon_8968:HG3_Ill_SVrefine2DISCOVARDovetail_11109:HG3_Ill_manta_3478:HG3_PB_SVrefine2PBcRDovetail_7285:HG4_Ill_SVrefine2DISCOVARDovetail_10931:HG4_Ill_manta_3620:HG4_PB_SVrefine2Falcon1Dovetail_9444:HG4_PB_SVrefine2PBcRDovetail_7690:HG4_PB_assemblyticsfalcon_8805;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0508083;ClusterMaxSizeDiff=0.0508083;ClusterMaxEditDist=0.0508083;PBcalls=19;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-218;DistBack=11480;DistForward=12258;DistMin=11480;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=15:68713339-68713558;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9954;PctRecOverlap=0.9909;SizeDiff=-1;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:61:1/1:0:23:0:18:1/1:0:10:0:13:1/1:0:40:./.:.:.:.:.:.
chr15	68983386	HG2_10X_SVrefine210Xhap12_10725	CGGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCAAGGTGGCGGGCGCCTGTGGTCTCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCCGGGGGGCAGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGAGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7682:HG4_PB_pbsv_15405:HG4_Ill_MetaSV_1714:HG4_PB_HySA_22537:HG2_PB_pbsv_15499:HG3_Ill_MetaSV_1775:HG3_10X_allpass_2988:HG3_PB_HySA_23368:HG3_Ill_scalpel_14886:HG3_Ill_GATKHCSBGrefine_10179:HG2_Ill_scalpel_14621:HG2_10X_allpass_2432:HG3_PB_pbsv_15149:HG2_PB_HySA_28213:HG3_PB_SVrefine2PBcRDovetail_7286:HG3_Ill_SVrefine2DISCOVARDovetail_11110:HG2_PB_SVrefine2PB10Xhap12_11197:HG2_PB_SVrefine2Falcon1plusDovetail_3867:HG2_Ill_SVrefine2DISCOVARplusDovetail_4304:HG2_10X_SVrefine210Xhap12_10725:HG4_PB_SVrefine2PBcRDovetail_7691:HG4_PB_SVrefine2Falcon1Dovetail_9445:HG4_Ill_SVrefine2DISCOVARDovetail_10932:HG2_PB_SVrefine2PBcRplusDovetail_3621;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10725:HG2_Ill_SVrefine2DISCOVARplusDovetail_4304:HG2_PB_SVrefine2Falcon1plusDovetail_3867:HG2_PB_SVrefine2PB10Xhap12_11197:HG3_Ill_SVrefine2DISCOVARDovetail_11110:HG3_PB_SVrefine2PBcRDovetail_7286;NumExactMatchSVs=6;ClusterMaxShiftDist=0.139683;ClusterMaxSizeDiff=0.139683;ClusterMaxEditDist=0.189274;PBcalls=13;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-296;DistBack=18886;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=297;REFWIDENED=15:68983387-68983979;PctSeqSimilarity=0.9576;PctSizeSimilarity=0.9867;PctRecOverlap=0.0565;SizeDiff=-4;StartDistance=-280;EndDistance=-284;GTMatch=1;TruScore=66;MatchId=1246.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:68:1/1:4:30:1:28:0/0:17:0:19:1:0/0:31:0:./.:.:.:.:.:.
chr15	69049567	HG4_Ill_GATKHCSBGrefine_10620	TCCAAGATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_20961:HG3_PB_assemblyticsfalcon_8939:HG4_PB_assemblyticsfalcon_8809:HG2_PB_assemblyticsfalcon_8973:HG3_Ill_Spiral_16008:HG2_Ill_breakscan11_2232:HG2_Ill_Spiral_1024:HG4_PB_pbsv_15406:HG2_Ill_tnscope_1694:HG4_PB_SVrefine2Falcon1Dovetail_9446:HG4_Ill_scalpel_14233:HG4_Ill_manta_3621:HG4_Ill_SVrefine2DISCOVARDovetail_10933:HG4_Ill_GATKHCSBGrefine_10620:HG4_10X_allpass_2841:HG3_PB_pbsv_15150:HG3_PB_SVrefine2PBcRDovetail_7287:HG3_Ill_scalpel_14887:HG3_Ill_manta_3479:HG3_Ill_SVrefine2DISCOVARDovetail_11111:HG3_Ill_GATKHCSBGrefine_10180:HG3_10X_allpass_2989:HG2_PB_pbsv_15500:HG2_PB_SVrefine2PB10Xhap12_11199:HG2_PB_SVrefine2Falcon2Bionano_7683:HG2_PB_SVrefine2Falcon1plusDovetail_3868:HG2_Ill_scalpel_14622:HG2_Ill_manta_4264:HG2_Ill_SVrefine2DISCOVARplusDovetail_4305:HG2_Ill_GATKHCSBGrefine_10271:HG2_10X_allpass_2433:HG2_10X_SVrefine210Xhap12_10726:HG2_Ill_SpiralSDKrefine_5632:HG4_Ill_Spiral_1206:HG4_Ill_MetaSV_1715:HG2_Ill_MetaSV_1657:HG2_PB_SVrefine2PB10Xhap12_11198;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10726:HG2_10X_allpass_2433:HG2_Ill_GATKHCSBGrefine_10271:HG2_Ill_SVrefine2DISCOVARplusDovetail_4305:HG2_Ill_manta_4264:HG2_Ill_scalpel_14622:HG2_PB_SVrefine2Falcon1plusDovetail_3868:HG2_PB_SVrefine2Falcon2Bionano_7683:HG2_PB_SVrefine2PB10Xhap12_11199:HG2_PB_pbsv_15500:HG3_10X_allpass_2989:HG3_Ill_GATKHCSBGrefine_10180:HG3_Ill_SVrefine2DISCOVARDovetail_11111:HG3_Ill_manta_3479:HG3_Ill_scalpel_14887:HG3_PB_SVrefine2PBcRDovetail_7287:HG3_PB_pbsv_15150:HG4_10X_allpass_2841:HG4_Ill_GATKHCSBGrefine_10620:HG4_Ill_SVrefine2DISCOVARDovetail_10933:HG4_Ill_manta_3621:HG4_Ill_scalpel_14233:HG4_PB_SVrefine2Falcon1Dovetail_9446;NumExactMatchSVs=23;ClusterMaxShiftDist=0.297408;ClusterMaxSizeDiff=0.297408;ClusterMaxEditDist=0.297408;PBcalls=12;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-330;DistForward=-323;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=15:69049568-69049911;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:8:26:0|1:7:0:0:25:0|1:37:0:0:24:0/1:27:13:0/1:26:18:.:.:.
chr15	70571973	HG2_PB_SVrefine2Falcon2Bionano_7688	GCACATACACACAGGCACACAGCCACATACACATGCACACACATACAGATACACACAGTCACACTCACATACACACAGGCACACAGACACATATACATGCACACACATACAGATACACAGTCACACTCACATACACACAGGCACACAGCCACATACACATGCACACACATACAGATACACACAGTCACACT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4309:HG4_PB_HySA_22563:HG4_Ill_250bpfermikitraw_20293:HG2_Ill_250bpfermikitraw_20633:HG2_PB_pbsv_15508:HG3_PB_pbsv_15158:HG4_PB_pbsv_15415:HG4_PB_SVrefine2PBcRDovetail_7694:HG4_PB_SVrefine2Falcon1Dovetail_9450:HG3_PB_SVrefine2PBcRDovetail_7291:HG2_PB_SVrefine2PBcRplusDovetail_3626:HG2_PB_SVrefine2PB10Xhap12_11205:HG2_PB_SVrefine2Falcon2Bionano_7688:HG2_PB_SVrefine2Falcon1plusDovetail_3871;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4309:HG4_PB_SVrefine2PBcRDovetail_7694:HG4_PB_SVrefine2Falcon1Dovetail_9450:HG3_PB_SVrefine2PBcRDovetail_7291:HG2_PB_SVrefine2PBcRplusDovetail_3626:HG2_PB_SVrefine2PB10Xhap12_11205:HG2_PB_SVrefine2Falcon2Bionano_7688:HG2_PB_SVrefine2Falcon1plusDovetail_3871;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0208333;ClusterMaxSizeDiff=0.0208333;ClusterMaxEditDist=0.0416667;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-190;DistBack=12042;DistForward=-191;DistMin=-191;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=586;REFWIDENED=15:70571974-70572749;PctSeqSimilarity=0.9867;PctSizeSimilarity=0.9896;PctRecOverlap=0.2228;SizeDiff=-2;StartDistance=-148;EndDistance=-150;GTMatch=0;TruScore=73;MatchId=1248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:1:16:1:5:./.:28:4:31:4:./.:19:3:./.:.:.:.:.:.
chr15	70677098	HG3_Ill_150bpfermikitraw_19488	ATATATATGTGTGTATATAGGTACCTATATATGTGTGTATATAGGTACCTATATATGTGTGTATATAGGTACC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3873:HG2_Ill_SpiralSDKrefine_5647:HG4_Ill_GATKHCSBGrefine_10628:HG3_PB_assemblyticsfalcon_8964:HG3_Ill_GATKHC_24570:HG3_Ill_GATKHCSBGrefine_10189:HG2_Ill_GATKHC_24723:HG2_Ill_GATKHCSBGrefine_10284:HG3_PB_pbsv_15160:HG4_PB_pbsv_15417:HG4_Ill_Krunchall_21291:HG4_Ill_250bpfermikitraw_20296:HG4_Ill_150bpfermikitraw_19557:HG3_Ill_svaba_19455:HG3_Ill_Krunchall_20573:HG3_Ill_250bpfermikitraw_20024:HG3_Ill_150bpfermikitraw_19488:HG2_Ill_Krunchall_20985:HG2_Ill_250bpfermikitraw_20636:HG2_Ill_150bpfermikitraw_19460:HG2_PB_pbsv_15510:HG4_PB_SVrefine2PBcRDovetail_7696:HG3_PB_SVrefine2PBcRDovetail_7293;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19460:HG2_Ill_250bpfermikitraw_20636:HG2_Ill_Krunchall_20985:HG3_Ill_150bpfermikitraw_19488:HG3_Ill_250bpfermikitraw_20024:HG3_Ill_Krunchall_20573:HG3_Ill_svaba_19455:HG4_Ill_150bpfermikitraw_19557:HG4_Ill_250bpfermikitraw_20296:HG4_Ill_Krunchall_21291;NumExactMatchSVs=10;ClusterMaxShiftDist=0.106667;ClusterMaxSizeDiff=0.106667;ClusterMaxEditDist=0.278146;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-72;DistBack=8217;DistForward=-61;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=148;REFWIDENED=15:70677041-70677260;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1249.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:31:0|1:42:5:1:24:0|1:34:2:0:14:0/1:14:13:./.:.:.:.:.:.
chr15	72017124	HG2_PB_SVrefine2PBcRplusDovetail_3634	GTTAAATAAGATTTGATGACGGGTTAGATTTGGGGGGATAGGAAGAGAGGAGGTATCCAGGATGATTCCTGGGTTTCTGATTACATGGATGGTGGTACCATTTACTGAGATAAGAAACACTGAGGCCGGGGTTGGGTTCAGCCTTAGACAAGACATCTGACTAAAGCTGGCAAGGAGGTAATTAAATAAGATTTGATGACGGGTTAGATTTGGGGGGATAGGAAGAGAGGAGGTATCCAGGATGATTCCTGGGTTTCTGATTACATGGATGGTGATACCATTTACTGAGATAAGAAACACTGAGGCCGGGGTTGGGTTCAGCCTTAGACAAGACATCTGACTAAAGCTGGCAAGGAGGTAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10745:HG2_PB_HySA_28258:HG2_PB_pbsv_15522:HG4_PB_pbsv_15427:HG3_PB_pbsv_15174:HG4_PB_HySA_22582:HG3_PB_HySA_23422:HG3_Ill_MetaSV_1784:HG2_Ill_MetaSV_1664:HG4_PB_assemblyticsfalcon_8853:HG4_PB_SVrefine2PBcRDovetail_7701:HG4_PB_SVrefine2Falcon1Dovetail_9458:HG4_Ill_SVrefine2DISCOVARDovetail_10952:HG4_10X_allpass_2843:HG3_PB_SVrefine2PBcRDovetail_7302:HG3_PB_SVrefine2Falcon1Dovetail_9396:HG3_Ill_SVrefine2DISCOVARDovetail_11127:HG2_PB_SVrefine2PBcRplusDovetail_3634:HG2_PB_SVrefine2PB10Xhap12_11216:HG2_PB_SVrefine2Falcon2Bionano_7695:HG2_PB_SVrefine2Falcon1plusDovetail_3881:HG2_Ill_SVrefine2DISCOVARplusDovetail_4319:HG2_10X_allpass_2436;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10745:HG4_PB_assemblyticsfalcon_8853:HG4_PB_SVrefine2PBcRDovetail_7701:HG4_PB_SVrefine2Falcon1Dovetail_9458:HG4_Ill_SVrefine2DISCOVARDovetail_10952:HG4_10X_allpass_2843:HG3_PB_SVrefine2PBcRDovetail_7302:HG3_PB_SVrefine2Falcon1Dovetail_9396:HG3_Ill_SVrefine2DISCOVARDovetail_11127:HG2_PB_SVrefine2PBcRplusDovetail_3634:HG2_PB_SVrefine2PB10Xhap12_11216:HG2_PB_SVrefine2Falcon2Bionano_7695:HG2_PB_SVrefine2Falcon1plusDovetail_3881:HG2_Ill_SVrefine2DISCOVARplusDovetail_4319:HG2_10X_allpass_2436;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00554017;ClusterMaxSizeDiff=0.00554017;ClusterMaxEditDist=0.00555556;PBcalls=15;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-360;DistBack=496;DistForward=-331;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=187;REFWIDENED=15:72017125-72017671;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:./.:0:21:0:2:./.:0:4:0:5:1/1:0:30:./.:2:4:.:.:.
chr15	72385956	HG4_PB_SVrefine2Falcon1Dovetail_9461	AGTGGCTCAAGCCTGTAATCCCAACATTTTGGGAGGCTGAGATGGGTGGATCACTTGAGGTTAGGAGTTCAAGACCAGCCTGGCCAACTTGGTGAAACCCCGTCTCTACTAAAAATAGAAAAATTAGCTGGGCATGACAGCAGGCACCTCTAATCCCAGCTACTTGGGAGGCTAAGGCACAAGAACCACTTGAAGCCAGGAGGCGGAGGTTGCAGTGAGCCGAGACTGTGCCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAAAATTAAATAAAAAAAACCACACAAATAAAAAATAAAATAAAATCATTGAAAAGTAGTGAACTTAAAACATACATCTGAAGAAATCACCCACAGTAAAAGAAGAAAAATACACACCCAAAAAAAGAAGAAAAACACAAAAATACAAAAAAAGGTTAAAAAAACATATAAGAAAGCCAGACACGGTGGCTCGTAGCTATAATCCCAGGAACTTGAGAGGCTGAGGTGGGAGGATCACTTCAGCCCAGGAGTTCAAGGCTGCAGTGAGCTATGATCACACCACTGCACTCCAGCTGGGAAACAGAGCAAGAACTTGTCAAAAGAAGAAAGAAGAAAGAGGAAGGAGGAAGAAGAAAGAAGGAAGAGGAGGAGGAGGAGGAGGAATAAAAGAAAAAATACATAAGAGTAAGAAAATCTAACATATATAGACATACCTCATTTTATCGCACTTTGCTTTATTGCACTTCACAGATAGTGATTTTTTAACAAATTAAAGGTTTGTGGCAACCCTGTGTCAAGTAAGTCAACAGGTGCCATCTTCTAACAGCATGTGCTCACTTCGTGTCTCTGTGTCAAATTTTGGTAATTCTTGCAGTATTTCAAGCTTTTTTAAACTTTTTTATGTATTTATTTATTTTTAGAGACAGGATCTCGCTCTGTCACCCAGGTTGCAGTGCAGCAGCATGACCATCATAGCTCACTGCAGCCTCATATTCCTGTGCTCCAGCAATCCTCCTGCCTCAGCCTCCCAAGTAGCTAGCACTACAAGTGCATGCCACCCTGCCCAGCTTATTTTTTAAGTTTTTGTACAGATGAGGTCTTGTTATGTTGCTGAGTCTAGTCTCAAACTCCTGGCCTTAAAGCAAACCTCTCACCTCAGCCTTCTAAAGCACCTGTATTACAGGTGTAAGCCGCCACACCTAGCTTCAAACTTTTTTATTATTATATCTGTTATGGTGATCTGTGATCAGTGATCTTTGATGTTACTGTAATTGTTCTGAGGCACCAAAAATCATGACCATATAAGACAGTGAACTTAATCAATCAATGTTATGTGTGTTCTGACTGCTCCATCGACCAGCTGTTCCCTGACTCTTTCTTCTCGTTGGGCCTCACTATTGCCTGAAACACACAATATTGAAATTAGGCCAATTAATAACCCTACAATGGCCTCTCAGTATTCAAATGAAAGGAAGAGTCAAATGTCTCTCACTTTAAATCAAAACCTAGAATGATTAGGCTTAGTGAGAAAGGCATGCTGAAAACCTAGACAGGCCAAAAGCTAGACCTCTTGTGCAAAACAGTTTGCCAAGTTGTGAATGCAAAGGAAAACTTGAAGGAAATTAAAAGTGCTACTCCAGCGAACACACAAATAAGATAGCAAAACCACCTTACTACTGATATGGAGAAAGTTTTAGTGGTCTGGAAAGAAGATCAAATTAGCCACAACATTCCCTTATGCCAAAGCCTAATCTGGAGCAAGTCTCTACCTCTCTTCACTTCTATGAAGGCTGAGAGAGGTGAGAAAGTTATAGAAGAAAAGTTGGACACTAGCAGTGTTGATGCATGAGATTTAAGGAAAGAAGCCGCCTCCACAACATAAAAGTGCAAGGTAAAGCAGCAAGTGGTGGCATAGTAGCTGGAGCAAGTTATCCAGAAGATCCAGCTAAGATAATTGATGAAGGTGGCTACACTAAACAACAGATTTTTAATGTGACAAAACGGCCTTGTGTTGGAAAAATATGTCATCTAGGACTTTCATAATTAGAAGTGAATGCCTGGCTTCAAAGCCTCAAAGAACAGGCTGCCTCTCCTGCTAGGGGCTAAGGCAGCTAATGACTAAGCTGAAACCAATGCTCATTGACCATTCTGAAAATCCTAGGGCTCTTGAGAATTAACGCTAAATCAAGGCCAGATGTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10750:HG4_PB_assemblyticsfalcon_8860:HG3_PB_assemblyticsfalcon_8989:HG2_PB_assemblyticsfalcon_9018:HG3_PB_pbsv_15177:HG2_10X_allpass_2437:HG3_10X_allpass_2995:HG4_Ill_Krunchall_21307:HG3_Ill_Krunchall_20589:HG4_10X_allpass_2844:HG2_PB_pbsv_15525:HG2_PB_HySA_28263:HG4_PB_pbsv_15431:HG4_Ill_MetaSV_1721:HG4_Ill_GATKHCSBGrefine_10640:HG3_Ill_MetaSV_1787:HG3_Ill_GATKHCSBGrefine_10202:HG2_Ill_SpiralSDKrefine_5656:HG2_Ill_MetaSV_1667:HG2_Ill_GATKHCSBGrefine_10292:HG2_Ill_tnscope_1697:HG4_PB_SVrefine2PBcRDovetail_7704:HG4_PB_SVrefine2Falcon1Dovetail_9461:HG4_Ill_SVrefine2DISCOVARDovetail_10957:HG3_PB_SVrefine2PBcRDovetail_7305:HG3_PB_SVrefine2Falcon1Dovetail_9399:HG3_Ill_SVrefine2DISCOVARDovetail_11131:HG2_PB_SVrefine2PBcRplusDovetail_3637:HG2_PB_SVrefine2PB10Xhap12_11219:HG2_PB_SVrefine2Falcon2Bionano_7698:HG2_PB_SVrefine2Falcon1plusDovetail_3884:HG2_Ill_SVrefine2DISCOVARplusDovetail_4322;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10750:HG4_PB_SVrefine2PBcRDovetail_7704:HG4_PB_SVrefine2Falcon1Dovetail_9461:HG4_Ill_SVrefine2DISCOVARDovetail_10957:HG3_PB_SVrefine2PBcRDovetail_7305:HG3_PB_SVrefine2Falcon1Dovetail_9399:HG3_Ill_SVrefine2DISCOVARDovetail_11131:HG2_PB_SVrefine2PBcRplusDovetail_3637:HG2_PB_SVrefine2PB10Xhap12_11219:HG2_PB_SVrefine2Falcon2Bionano_7698:HG2_PB_SVrefine2Falcon1plusDovetail_3884:HG2_Ill_SVrefine2DISCOVARplusDovetail_4322;NumExactMatchSVs=12;ClusterMaxShiftDist=0.116764;ClusterMaxSizeDiff=0.116764;ClusterMaxEditDist=0.116764;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2193;DistBack=64894;DistForward=-2070;DistMin=-2070;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=125;REFWIDENED=15:72385957-72388274;PctSeqSimilarity=0.9917;PctSizeSimilarity=1;PctRecOverlap=0.9959;SizeDiff=0;StartDistance=-9;EndDistance=-9;GTMatch=0;TruScore=99;MatchId=1251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:79:./.:1:31:0:2:1/1:0:27:0:14:1/1:0:27:1/1:7:127:2311:.:.
chr15	72568201	HG2_Ill_GATKHCSBGrefine_10293	AGTGTCATTTGGCATTGTCAATCATCTTGCCCCTGCAGTTGACTGCATGGTGTCATTTGGCATTGTCAATCATCTTGCCCCTGCAGTTGACTGCATGGTGTCATTTGGCATTGTCAATCATCTTGCCCCTGCAGTTGACTGCATGGTGTCATTTGGCATTGTCAATCATCTTGCCCCTGCAGTTGACTGCATG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10753:HG4_PB_HySA_22586:HG2_PB_HySA_28265:HG3_PB_pbsv_15179:HG2_PB_pbsv_15527:HG4_PB_pbsv_15432:HG3_PB_HySA_23428:HG4_Ill_MetaSV_1722:HG3_Ill_MetaSV_1788:HG2_Ill_MetaSV_1668:HG4_PB_SVrefine2PBcRDovetail_7705:HG4_PB_SVrefine2Falcon1Dovetail_9462:HG4_Ill_manta_3628:HG4_Ill_SVrefine2DISCOVARDovetail_10958:HG4_Ill_GATKHCSBGrefine_10642:HG4_Ill_150bpfermikitraw_19572:HG4_10X_allpass_2845:HG3_PB_SVrefine2PBcRDovetail_7307:HG3_PB_SVrefine2Falcon1Dovetail_9400:HG3_Ill_SVrefine2DISCOVARDovetail_11132:HG3_Ill_GATKHCSBGrefine_10203:HG3_Ill_250bpfermikitraw_20041:HG3_10X_allpass_2996:HG2_PB_assemblyticsfalcon_9020:HG2_PB_SVrefine2PBcRplusDovetail_3639:HG2_PB_SVrefine2PB10Xhap12_11221:HG2_PB_SVrefine2Falcon2Bionano_7699:HG2_PB_SVrefine2Falcon1plusDovetail_3885:HG2_Ill_manta_4271:HG2_Ill_SpiralSDKrefine_5657:HG2_Ill_SVrefine2DISCOVARplusDovetail_4323:HG2_Ill_GATKHCSBGrefine_10293:HG2_Ill_250bpfermikitraw_20652:HG2_Ill_150bpfermikitraw_19476:HG2_10X_allpass_2438;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10753:HG4_PB_SVrefine2PBcRDovetail_7705:HG4_PB_SVrefine2Falcon1Dovetail_9462:HG4_Ill_manta_3628:HG4_Ill_SVrefine2DISCOVARDovetail_10958:HG4_Ill_GATKHCSBGrefine_10642:HG4_Ill_150bpfermikitraw_19572:HG4_10X_allpass_2845:HG3_PB_SVrefine2PBcRDovetail_7307:HG3_PB_SVrefine2Falcon1Dovetail_9400:HG3_Ill_SVrefine2DISCOVARDovetail_11132:HG3_Ill_GATKHCSBGrefine_10203:HG3_Ill_250bpfermikitraw_20041:HG3_10X_allpass_2996:HG2_PB_assemblyticsfalcon_9020:HG2_PB_SVrefine2PBcRplusDovetail_3639:HG2_PB_SVrefine2PB10Xhap12_11221:HG2_PB_SVrefine2Falcon2Bionano_7699:HG2_PB_SVrefine2Falcon1plusDovetail_3885:HG2_Ill_manta_4271:HG2_Ill_SpiralSDKrefine_5657:HG2_Ill_SVrefine2DISCOVARplusDovetail_4323:HG2_Ill_GATKHCSBGrefine_10293:HG2_Ill_250bpfermikitraw_20652:HG2_Ill_150bpfermikitraw_19476:HG2_10X_allpass_2438;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0103627;ClusterMaxSizeDiff=0.0103627;ClusterMaxEditDist=0.0104167;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-192;DistBack=66400;DistForward=-110;DistMin=-110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=84;REFWIDENED=15:72568202-72568477;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:66:./.:1:3:1:8:1/1:0:6:0:10:1/1:0:31:./.:.:.:.:.:.
chr15	73483659	HG2_PB_SVrefine2Falcon1plusDovetail_3890	TGTAACTTTAGGATAATAGTAATTGGAAAGAACATAGAAAGACAGAGTATCGATGAGAATTCAATAGTCAGCATTAAAGGAGATTAAAAGTGAAGATAAAAGCTTAACTTTATGAAGCAAAGTTTGAAGGTTTTTTCAAAATAGACAACAGAAATCTTTAGGATAATAGTAACTTTAGGATAATA	T	20	PASS	ClusterIDs=HG2_10X_allpass_2439:HG2_Ill_MetaSV_1672:HG2_PB_pbsv_15532:HG4_PB_pbsv_15438:HG4_PB_SVrefine2PBcRDovetail_7709:HG4_Ill_SVrefine2DISCOVARDovetail_10963:HG4_Ill_250bpfermikitraw_20316:HG4_Ill_150bpfermikitraw_19576:HG4_10X_allpass_2847:HG3_PB_SVrefine2Falcon1Dovetail_9404:HG2_PB_SVrefine2PBcRplusDovetail_3643:HG2_PB_SVrefine2PB10Xhap12_11225:HG2_PB_SVrefine2Falcon2Bionano_7703:HG2_PB_SVrefine2Falcon1plusDovetail_3890:HG2_Ill_SVrefine2DISCOVARplusDovetail_4327;NumClusterSVs=15;ExactMatchIDs=HG2_10X_allpass_2439:HG4_PB_SVrefine2PBcRDovetail_7709:HG4_Ill_SVrefine2DISCOVARDovetail_10963:HG4_Ill_250bpfermikitraw_20316:HG4_Ill_150bpfermikitraw_19576:HG4_10X_allpass_2847:HG3_PB_SVrefine2Falcon1Dovetail_9404:HG2_PB_SVrefine2PBcRplusDovetail_3643:HG2_PB_SVrefine2PB10Xhap12_11225:HG2_PB_SVrefine2Falcon2Bionano_7703:HG2_PB_SVrefine2Falcon1plusDovetail_3890:HG2_Ill_SVrefine2DISCOVARplusDovetail_4327;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0162602;ClusterMaxSizeDiff=0.0162602;ClusterMaxEditDist=0.0218579;PBcalls=8;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-184;DistBack=70263;DistForward=-181;DistMin=-181;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=155;REFWIDENED=15:73483660-73483998;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:27:0|1:25:1:4:25:./.:0:2:36:1:0/1:39:18:./.:.:.:.:.:.
chr15	76884596	HG3_PB_SVrefine2Falcon1Dovetail_9416	TTTAGAAATAAAGAGGCATTTCAATTATGACTTTATGTAATTGTTAAAGCAGAGTTAGGCCAACTACAGCCCACAGCCCACTGCTCAAATAAAATGTTATTTGAATATGGTCACACAAATTGATTTATGTATTCTCTGTGACTCCCTTATGCTACAAAGATAGACAGTTGAATAAGTGAGACTCACAAAGCCTAAAATATAGACCCTCACTTTAGGCCCACAAACCCTAAAATATTTACAACCTGGTCCTTTCTAAAAAAATGTTTGGTGGCTGGCAAGATGGCCAAAAGGAACAGCTCCATTCTGCAGCTCCCAGCGAGATCAACGCAGAAGGCAGGTGATTTCTGCATTTCCAACTGAGGTACCTGGCTCATCTCACTGGGACTGGTTAGACAGTGGGCGCAGCCCATGGAGGGTCAGCCAAAGCAGGGTGAGGTGTTGCCTCACCTGGGACGCGCAAGGGTTTGGGGAACTCCCTCCCCTAGCCAAGGGAAGCCTTGAGGGACTGTGCCTTGAGGAATGGTGCACTCCAGCCCAGATACTATGCTTTTCCTAAGGTCTTTGCAACCCGCAGACCAGGAGATTCCCTTGGGTGCCTATGCCACCAGGGCCCTGGGTTTCAAGCACAAAACTGGGTGGACTTTTGGGCAGACACCGAGCTAGCTGCAGGAGTATTTTTTTATACCCCAGTGGCACCTGGAACACCACCGAGACAGAACCATTCATTACCCTGGAAAGGGGGCTGAAGCCAGGGAGCGAACTCGTCTTGCTCAGCAGATCCCACCCCCACAGAGGCCAGCAAGCTAATATCCACTGGCTTGAAATTCTTGCTGCCAGCACAGCAGTCTGAAGTCGACCTGGGAAGCTTGAGCTTGGTGTGGGGAGGGGTGCCTGCCATTACTGAGGCTTGCGTAGGCAATTTTCCCCTCACAGGGTAAACAAAGCCACTGGGAAGTTCGAGCTGGGTGGAGGCATCATAGCTCCGCAAAGCTGCTATAGCCAGACTGCCTCTCTAGACTCCTCCTCTCTGGCCAGGGCATATCTGAAAGAAAGGCAGCAGCCCCAGTCAGGGGCTTATAGATAAAACTCCCATCTCCCTGGGGCAGAGCACCTGGGGGAAGGGGCGGCTGTGGGCACAGCTTCAGGAGACTTAAACATTCCAGCCTGCTGACTCTGAAGAGAGCAGCGGATCTCCTAGCACAGTGCTCGAGCTCAAATAAAGGACAGACTGCCACCTCAAGTGGGTCCCTGATCCCCATGCCTCCTGACTGGGAGACACCTCCCAGCAAGGGGTCAACAAACACCTCATACGGGAGAGCTCTGGCTGGGATCTGGTGGGTGCCCCTCTGAGACAAAGCCTCCAGAGGAAAAAACAGACAGCAATCTTTGCTGTTCTGCAGCATCCACTGGTGATACCGAGGCAAACAGGATCTGGAGTGGACCTCCAGCAAACTCCAGCAGACCTGAAGTACAGGGGCCTGATTGTTAGAAGAAAAACTGACAGACAGAAAGGAATAGCATCAACAGCAACAAAAAGGACATCCACACAGAAACCCCATCCGAAGGTCACCAACATCAAAGACCAAAGGTAGATAAATCCAGGAAGATGAGGAAAAACCAGCACAAAAAGGCTGAAAATTCCAAACACCAGAAGGCCTCTTCTCCTCCAAAGGATCACAGCTCCTTGCCAGCAAGGGAATAAAACTGGATGGAGAATGAGTTTGACAAATTAACAGAAGTAGGCTTCAGAAGGTGGGTAATAACAAACTCCTCTGAGCTAAAGGAGCATGATATAACCGAATGCAAGGAAGCTAAGAACCTTGAAAAAAGGTTAGAGGAATTGCTAACTAGAATAACCAGTTTAGAGAAGAACATAAATGATCTGATGGAGCTGAAAAACACAACACGAGAACTTCGTGAAGCATACACAAGGATCAATAGCTGAATCAACCAAGCGGAAGAAAGGATATCAGAGACTGAAGATCAACTTAATGATATAAAGCATGAAGACAAGATTAGAGAAAAAAGAATAGAAAGGAATGAACAAAGCCCCCAAGAAATACGGGAATATGTGAAAAGAACACAACTACGTTTGATTGGTGTGCCTGAAAGTGACTGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAACCTAGCAAGAAAGGCCAACACTGAAATTCAGGAATTACAGAGAATGCCCCAGAGATACTCCTCGAGAAGAGCAACCCCAAGACACATAATCATCAGATTCACCAAGGTTGAAATGAAGGAAAACATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTATCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCTGCAGAAACTCTACAAGCCAGAAGAGAGTAGGGGCCAATACTCAACATTATTAAAGAAAAGAATTTTCAACCCAGAATTTCAAATCCAGCCAAATTAAGCTTCATAAGCAAAGGAGAAATAAAATCCTTTACAGACAAGTAAATGCTGAGCGATTTTGTCACCACCAGGCCTGCCTTACAAGAGCTCCTGAAGGAAGAACTAAATATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATATTAAACTGTAAAGACCATCAACACTACGAAGAAATTGAATCAACTAACCGGCAAGACAACCAGCTAGAATAATAATGACAGGATGAAATTCACACATAACAATATTAACCTTAAACGTAAATGGGCTAAATGCCCTAATTAGAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGAACCATTAGTGTGCTGTATTCAGGAGGCCCATCTCACAAGCAAAGACAAAAATAGGCACAAAATAAAGGGATGGAGGAAGATCCATGAAGCAAATGAAAAGCAAAAGAAAAGCAGGGGTTGCAGTCCTAGTCTCTGATAAAACAGACCTTTAGCCAACAAAGATCAAAAGAGACAAAGAAGGGCATTACATAATGGTAAAGGGATCAATGCAACAAGAAGAGTTAACTATCCTAAATATATACGGACCCAGATACATAAAGCAAGTTCTTAGAGACGTACAAAGAGACTTAGACCCCCATACAATAATAGTGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGGCAGAAAATTAACAAGGATATTCAGGACTTGAACTTGGCTCTGGACTAAGTGGACCAAATAGACATCTACAGAACTCTCCACCCCAAATCAATAGAATATACATTCTTCTCAGTACCACATCGCATTTATTCTAAAATTGACCACATAATTGGAAATAAAACACTCCTCAGCAAATGCAAAAGAACAGAAATCATAACAAACAGTCTCTCAGACCACAGCACAACCAAATTAGAACTCAGGATTAAGAAACTCACTCAAAACTGCACAACTACATGGAAACTGAACAAACTGCTCCTGAATGACTACTGGTTACATAACAAAATTAAGGCAGAAATAATAAGTTCTTTGAAACCAATGGGAAGAAATACAAAATGTTCCAGAATCTCTGGGACACTGCCAAAGCAGAGTTTAGAGGGAAATTTATAGCACTAAATGCCCACAGGAGAAAGCAGGAAAGATCTAAAATCAACACCCTAACATCACAATTAGAAGAACTGAGAAGCAAGAGCAAACAAATTCAAAAGCTAGCAGAAGAAATAACTAGGATCAGAGCAGAACTGAAGGAGATACAGACACGAAAAACCCTTCAAAAAATCAGTGAATCCAGGAGCTGGTTTTTTGAAAAGATTAACAACATAGATGGACCACTAGCCAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGGCACAATAAACAATGACAAAGAAAAGATCACCACTTATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATAACTTCCTGGACACATACAGCCTCCCAAGATGAAACCAGGAAGAAGAATCCCTGAACAGACCAATAAGAAGTTCTGAAATTGAGGCAGTAATTAATAGCCTACCAACCAAAAAAAAAAAAAAAAGCCCAGGACCAGATGGATTCATAGCCAAATTCTACCAGAGGTACAAAGAGGAACTGGTACCATTCCTTTTAAAACTACTTCAAACAATAGAAAAAGACGGACTCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAACTCAGCAGAGACACAACAAAAAAAGAAAATTTCAGGCCAATATCCCTGTTGAACACCGATGTGAAAATCCTCAATAAAATACTGGCAAACCAAATCTGGCAGCACATTAAAAAGCTTATCTACCATGATCAAGTCGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACACAAATCAATACTATCCATCACATAAACAGAACCAACGAGAAAAACCACAAGATTATCTCAATAGATGCAGAAAAGGCCTTCGATAAAATTCAAAACCCTTCATGCTAAAAACTCTCAATAAAGTAGGTATTGATGGAATGTATCTCAAAATAATAAGAGCTATTTATGACAAACCCACAGCCAACATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCTCTGAAAACCGGCAAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGGACAATCAGGCAAGAGAAAGAAATAAAGAGTATTCAAATAGGAAGAGAGGAAGTCAAATTGTCTCTGTTTATAGATGACATGACTGTATATTTAGAAAACCCCATCGTCTAAGCCCCAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATATAAAATCAGTGTGCAAAAATCACAAGCATTCCTATACACCAATAATGGACAGAGAGTCAAATCATGAGTGAACTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGCAAAACAACTTACACGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTACTCCACAAAATAAAAGAGGACACAAACAAATGAAAAACATTCCATGCTAATGGATAGGAAGAATCAAATCATGAAAATGGCCACACTGCCAAAAGTAATTTACAGATTCAGTGGTATCCCCATCAACCTACCATTGACTTTCTTCACAGAATTAGAAAAAACTACTTTAAATTTCATATGGAACCAAAAAAGAGCCTGTACAGCCAAGAGAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACAAGGCTACAGTAACCAAAACAGCATGGTACTAGTACCAAAACAGATATATAGACCAACAGAACAGAACAGAGCCCTCAGAAATAATGCCACACATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGAAATAGGGAAAGGATTCCCTATTTAATTAATGGTGTTGAGAAAACTGGCTAGCCATATGTAGAGAACTGAAATTGGACCCCTTCCTTACACCTTACACAAAAATTAACTCATGATGGATTAAAGACTTAAACATAAGGCCTAAAATCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAAGACTTCATGACTAAAATATCAAAAGCTATGGCAATAAAAGACAAAATTGACAAATGAGATGTAATTAAACTAAAGAGCTTCTGCATAGCAGAAGAAACTATCAACAGAGTGAACAGGGAACCTACAGAATGGGAGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCTAATATCCAGAATCTACAAGGAACTTAAAACAAATGTACAAGAAAAAAAAAACAACCCCATCAAAAAGTGGGTGATGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCGGCCAACAAACATGAAAAAAGGCTCATCATCAATGGTCATTAAAGAAATGCAAATCAAAACCACAATGAGATACCGTCTCACGCCAGTTAGAATGGTGACCATTAAAAAGTCAGGAAACAACGAATGCTAGAGGGGATGTGGAGAAATAGGAACACTTTTTACACTGTTGGTGACAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCAATTTCTCAAAGATGTAGAACTAGAAATGCCATTTGACCCAGCAATCCCATCACTGGGTACATACCCAAAGGATTATAAATCATTCTACTATAAAGACACATGCACACGTATGTTTATTGCAGCACTTTTCACAATAGCAAAGACTTGGAACCAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGCATATATACACCATGGAATACTATATAGCCATAAAAAAGGATGAGTTCATGTCCTTTACAGGGACATAGATGAAGCTGGAAACCGTCATTCTCTGCAAACTAACACAGGAACAGAAAACCAAACACCACATGTTCTCACTCATAAGTGGGAGGTGAACAATGAGAACACGTGGACACAGGGAAGGAAACATCACACACCGGGGCCTGTTGGGGTTAGGGGGATAGAGGAGGGATAGCATTAGGAGAACTACCTAATGTAGATGACGGGTTGATGGGTGCAGCATGGCACATGTATACCTACGTAACCTGTATGTTCTGCACATTTATCCCAGAAATTAAAGTATAATTAAAAAAAAAAAACTTTTGCCAGGACCCAGTTTCTAGCGGTAATAAAATGAATATGTATTAAGCATAAGGTTACCTGCTAGATTTTAAAAAAATAATAAAAATATACACAAGTATATAGATATCTACAATTCAATAATAAAAAAAGATAATTCACCAAAAATGGCAAAATATCTGAATAGACACTTGCCATAAGAAGAAATAAATGGCTTATACATACATGAGAGGACACTCAACACCATTAGGATTATCATGGAAACTCTAAATAAAATTTAAAAATGCCACTACATACCCATCTGAATGCCTAAAATTAAAAAGATTGACAACGTCAAATATTACCAAGGATATGAAACAGGAACTCTCACACATTGTTGGAAAGTAGGTAAAATGGTAATAATACTTTGAAAAAACGGTCTCGTGGTTTCTTATAAACCTAAACATACACATATCAAAGGACTTTGCACATTCATGCCTAGGTGTTCACCCAATAGAAATGAAAACTTATATCCAAAATTTATTTCCAAAAAGTAGAAAGAGCCCAAGTATCCATCATTAGTGGAATACACAAACAAATCAAGGCTACATTTACTCATAGGAGTACTGTCCAGCAATAAAAAGGAATGAATTGATAAACACAACATGGGTGAAACACAAAAACATGCTGAATGAAAGAAGGCTTATACAAAAGAGTACATACTATTTGATTTCATTTATAGCAAGCTCTACAACAGATGATTCTCATCTGTGGTGAAAGACAAGCTCTACAACAGGTGATTCTAATCAGTGATGAAAGAAAATCAGAATAGTGGTTGCCTCTTGGGTGGGAGTAAAGGGATTCACCAAGGACATATAATAACCTTCTGGGATGATGATACTGTGCAAATTTTGAGAGGTGTTTAAAATACTCAGTGTCTGCATTTGTCAAAATTTATCAAATGTCACCCTTAAGATCTGCGCATTTTGTTACATGTAAATTTTACCTCAAAACAAACACACAAACAAGGATAAATAATGAACTTGAGTTAATAACATGCATGTTGAAATACTGGAGGAGGAATATACTGATGTATGCAATTTACTTTCATGCATCAAAATCTGATGGATTGATAATGGATAAAGGGATGGAAAGATGAATAAATGTGATTAAGTATAGTAAATAATTACAGAATATATGTAGAGGATACATAAGTTTCCACAGTAAAATTCTTTCCAACTTTTCTGAATTTTTGAAAAATTTCATGCTAGAAAAACTACAGAAATATCTATTATGATATTCACACTTTGTACCAAACAGATAACATACTTTTCAAAAAATAAGGAATAGTTACAATTAGTAAACTGTATTAAAAAAGAAGATCCCAAATCCCAAAGGCAGAAATCACTGAACAACATATAAACTTAAAATTAAGCAAAACTAATAGAAAAATAGCATACTTGGAAAGTGTGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACATATACATATATATATATATTTTTTTTTTTTTGAGATGAAGTCTCGCTCTTGTCACCCAGGCTGGAGTGCAATGGCACCATCTCTACCCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTATCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCTGTCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCCCCATTTTGGCCATACTGGTCTTGAACTCCTGACCTCAGACGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCCACCCAGAAAGTATTTTTTTAAAATAATTCTAAATCACTCTTGGATTCAGAATAAAATACCAATTATGTGGAGATGAATAAAAACAAAAACACTCTCTATGAAAACACAGTAAGAAGGATAAAAGAAGAAATGAAGTCAAAGTGAAAACAAAACAGAAAACAAAAAGATCGAATCTATACATTTTAAAGCAATTTTTGGAAAGGACCAATAAAAAACAACCTCTGAAAAGTTTACTCAAAAAACAACAACAGAAGAAATTTCTAATACTAGCAACAAAAACCGAAGAAAAAATGTATTGAGAATTAAAGAAAATGTTAATGTGGATACACAGAATAGAAATTGAAAATTATGCTTTTTATTTAAAAAGTAATGGTAGTAGACAATATTCTAAAATAAGAATAATGGTGTTCTATCATGAATGGGTGATGGATGTTGTCAAACATTTTTTCTCCATCTAATGATACGTATGTGAGTTTTCTTATTTAGCCTGGTTATTTGATGGTTTTAAATTAGCAATTTATATGATTACATATTCTCTCCTTTCTTAGCACATCAATTACAGTCATATGCTGTATAAGGATGTTTCAGTCAATGACAGACTGCATATATGACAGTGGTCCCAAAAGATTATAATACTGCATTTTTACTGTATCTTTCCTATGTTTAGTTATGTTTAAATACACAAATATTTATCATTTTGTTACAATTGCCTGTAGTATTCATTACAGTAACATGGCATACATGTTTGTAGCCTAAGAGCTATAGGCCATATCATATAGCTTAAATGTATAGTAGGCTACACCATCTGGGTTTGTGTATGTATACTCTGATGTTCAAACAATGATGAAATTGCCTAAGGACACATCTCTCAGAACATATTTTCATTGTTAAGTGATGTATGACTGTATATTTCTTATTTTTAGTAGTTGCAAACTAAAAGTTTGCAGTATAGATTTATAATTATTCCAAGTCCAGTTTCAAATAATGCTATACTGCTTCACAGGTAGTGCTGTGAAATACCTTATAATAACAAAATATTCCTCATTTTTCCTTCCTATCCCTTCTATCACTGCTGTCATTCATTTCACATAGAAATAAATATACAGTCATCCCTTGGTATATGTGTGAGATTGGTTCCAGGAACCCCATGTAAAGCAAAATCTGCACATATTCAAGTCCTGCAGTCGGCCCCTTGGAATCTGCAAATACGAAAAGTCAGCCCTCCATATCCATGAGTTTTATATCCTGAGAATACTACATTTTCAATCCGTGTTTGGTTGAAAACATCTGCATATCATTGGGCTTGGGTAGTTCAAACCCATGCTGTCTAAGGGTCAACTGTACATACACACATAAGCATACATAATAGAAAACACTGTTGCTATTATTATTTTGAACAAACTGTTATCTGTTAAATTAACAATAAGAAAAATGTTATTTTATCTATGTTTATTCGTTCTTCAAAATTATTCCTTTTGTTATACAGATCTGAGTTTCTGATCTGTATCATTTAACTTCTCTCTGAAGAACTTCTTTTAACATTTCCTGCAAGGCAAGTCTAATAGCAACAATTCCCTCAATTTAGTTTATCTGAAAAAGTTTTTATTTCTTCATTTTTGAAGTATAACTTTGCACAGTACAGAATTCTAGGTTGGTGAGTTTTTTTCTAATCTTTGCTCCCATATAGGTAAGGTGTTTCTTTCCCCTTTGGTCTTTCAGGATTTTTCATTTCTCTTTGATTTACTGCAATTTGAATATCATACGCTCACAGGTAGAATTTTTTGTTTTTGTTTTTTGGGGGAAGCATTTATCTTGCTTGGTATTCTCCTATTCTCTAAACTTCCTGGATCTAGGATTTGGTGTCTGTCACTAATTTGGGGAAAATTCTCAGTCATGATTGTTTCAAATACTGCTTTTGTTCCTCCTCACTTTCTTTTCCCTTCTGGTATCCCAATTACATGTACGTTATACCTTTTTGCAGTTGTCCCACAGTTTCAGATATTCTGTTCACTTTCTCCCCAGTCTTCTTTAAATTGTTTTTCAATTTTGGAAGTTACTATTGTCATATCCTCAAGCTGAGATTATTTCCTCAGCTATCTGGTCTACTAATCAGCCTATCAATAGCACTGTTCACTTTTGTTACCATGTTTTCAAATTCTGGCATTTCTTTTTTTTTTTTTTAATTTGAGCTCATTTATTGGTTCAGAATTTACTAAGACAGCAAGAAAACTTTTTTTTTTTTTTTGGTTTGGATCCTCAATAGTTTTTATTTTATTTATTTATTTACTTAATTTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACAACGTGCAGGTTAGTTACATATGTATACATGTGCCACGTTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTCCTAATGATATCCCTCCCCCTTCCTCCCACCCCACAACAGTCCCCAGAGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGCGAGAACATGCGGTGTTTTTTTGTCCTTGCGATAGTTTGCTGAGAATGATGATTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACGTTTTCTTAATCCAGTCTATGGTTCTTGGACATTTAGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCTATAAACATATGTGTGCATGTGTCTTTACAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTGATGGGATGGCTGGGTCAAATGGTTTTCTAGTTCTAGATCCCTGAGGAATCACCACACTGACTTCCACAATGGTTGAACTAGTTTGCAGTCCCACTCACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATCGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGACAGTGATGATGAGCATTTTTTCATGTGTCTGTTGGCTGCATAAATGTCTTCTTTTGAGAAGTATCTGTTCATATCCTTTGCCCACTTTTTGATGGGGTTGTTTTTTTTCTTGTAAATTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATCTTCTCCCATTCTGTAGGTTGCCTGTTCAGTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCTATGTCCTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACCTTTAAGTCTTTAATCCATCTTGAATTAATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTGCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCTATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCAGATAGCTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGGTCTATATCTCTGTTTCGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAAGCGGGATGCCTCCAGCTTCGTTCTTTTGCCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCTGATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1678:HG2_PB_pbsv_15547:HG4_PB_pbsv_15452:HG3_10X_allpass_3000:HG4_10X_allpass_2848:HG3_PB_HySA_23455:HG4_Ill_Krunchall_21334:HG2_Ill_Krunchall_21019:HG2_10X_allpass_2440:HG4_PB_SVrefine2PBcRDovetail_7717:HG4_PB_SVrefine2Falcon1Dovetail_9473:HG4_Ill_MetaSV_1729:HG3_PB_pbsv_15201:HG3_PB_SVrefine2PBcRDovetail_7322:HG3_PB_SVrefine2Falcon1Dovetail_9416:HG3_Ill_MetaSV_1793:HG2_PB_pbsv_15546:HG2_PB_SVrefine2PBcRplusDovetail_3654:HG2_PB_SVrefine2PB10Xhap12_11236:HG2_PB_SVrefine2Falcon2Bionano_7709:HG2_PB_SVrefine2Falcon1plusDovetail_3899:HG2_Ill_SVrefine2DISCOVARplusDovetail_4342:HG2_10X_SVrefine210Xhap12_10770:HG4_Ill_Krunchall_21333:HG3_Ill_Krunchall_20610:HG2_Ill_tnscope_1699;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10770:HG2_Ill_SVrefine2DISCOVARplusDovetail_4342:HG2_PB_SVrefine2Falcon1plusDovetail_3899:HG2_PB_SVrefine2Falcon2Bionano_7709:HG2_PB_SVrefine2PB10Xhap12_11236:HG2_PB_SVrefine2PBcRplusDovetail_3654:HG2_PB_pbsv_15546:HG3_Ill_MetaSV_1793:HG3_PB_SVrefine2Falcon1Dovetail_9416:HG3_PB_SVrefine2PBcRDovetail_7322:HG3_PB_pbsv_15201:HG4_Ill_MetaSV_1729:HG4_PB_SVrefine2Falcon1Dovetail_9473:HG4_PB_SVrefine2PBcRDovetail_7717;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00259519;ClusterMaxSizeDiff=0.00202733;ClusterMaxEditDist=0.0236019;PBcalls=13;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-12342;DistBack=1012;DistForward=14226;DistMin=1012;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=15:76884597-76896947;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1255.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:65:1/1:0:6:0:6:1/1:0:10:0:20:1/1:0:39:1/1:0:448:12222:.:.
chr15	77910861	HG2_PB_SVrefine2Falcon1plusDovetail_3903	ACTGTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTTTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1681:HG2_PB_assemblyticsPBcR_8773:HG4_Ill_Krunchall_21339:HG2_Ill_Krunchall_21023:HG4_PB_assemblyticsfalcon_8902:HG3_PB_assemblyticsfalcon_9035:HG2_PB_assemblyticsfalcon_9064:HG4_Ill_Spiral_1211:HG2_Ill_Spiral_1026:HG2_PB_HySA_28324:HG3_PB_pbsv_15208:HG4_PB_HySA_22621:HG2_Ill_tnscope_1700:HG4_PB_pbsv_15456:HG4_PB_SVrefine2PBcRDovetail_7720:HG4_PB_SVrefine2Falcon1Dovetail_9477:HG4_Ill_svaba_19311:HG4_Ill_SVrefine2DISCOVARDovetail_10982:HG4_Ill_MetaSV_1732:HG4_Ill_GATKHCSBGrefine_10654:HG4_10X_allpass_2850:HG3_PB_SVrefine2PBcRDovetail_7324:HG3_PB_SVrefine2Falcon1Dovetail_9420:HG3_Ill_svaba_19498:HG3_Ill_SVrefine2DISCOVARDovetail_11160:HG3_Ill_MetaSV_1795:HG3_Ill_GATKHCSBGrefine_10217:HG3_10X_allpass_3001:HG2_PB_pbsv_15553:HG2_PB_SVrefine2PBcRplusDovetail_3658:HG2_PB_SVrefine2PB10Xhap12_11241:HG2_PB_SVrefine2Falcon2Bionano_7713:HG2_PB_SVrefine2Falcon1plusDovetail_3903:HG2_Ill_svaba_19344:HG2_Ill_breakscan11_2235:HG2_Ill_SVrefine2DISCOVARplusDovetail_4347:HG2_Ill_GATKHCSBGrefine_10302:HG2_10X_allpass_2441:HG2_10X_SVrefine210Xhap12_10776:HG3_PB_HySA_23464;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10776:HG2_10X_allpass_2441:HG2_Ill_GATKHCSBGrefine_10302:HG2_Ill_SVrefine2DISCOVARplusDovetail_4347:HG2_Ill_breakscan11_2235:HG2_Ill_svaba_19344:HG2_PB_SVrefine2Falcon1plusDovetail_3903:HG2_PB_SVrefine2Falcon2Bionano_7713:HG2_PB_SVrefine2PB10Xhap12_11241:HG2_PB_SVrefine2PBcRplusDovetail_3658:HG2_PB_pbsv_15553:HG3_10X_allpass_3001:HG3_Ill_GATKHCSBGrefine_10217:HG3_Ill_MetaSV_1795:HG3_Ill_SVrefine2DISCOVARDovetail_11160:HG3_Ill_svaba_19498:HG3_PB_SVrefine2Falcon1Dovetail_9420:HG3_PB_SVrefine2PBcRDovetail_7324:HG4_10X_allpass_2850:HG4_Ill_GATKHCSBGrefine_10654:HG4_Ill_MetaSV_1732:HG4_Ill_SVrefine2DISCOVARDovetail_10982:HG4_Ill_svaba_19311:HG4_PB_SVrefine2Falcon1Dovetail_9477:HG4_PB_SVrefine2PBcRDovetail_7720:HG4_PB_pbsv_15456;NumExactMatchSVs=26;ClusterMaxShiftDist=0.144516;ClusterMaxSizeDiff=0.144516;ClusterMaxEditDist=0.144516;PBcalls=18;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-374;DistBack=13835;DistForward=63383;DistMin=13835;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=15:77910862-77911246;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1256.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:1:37:0:10:1/1:0:35:0:21:1/1:0:37:./.:1:11:.:.:.
chr15	79804633	HG4_PB_SVrefine2PBcRDovetail_7730	GACTGAGACAAATGATCCAACTGGCATAATGTCTGAGCACCCTCTGGTCAGCCACCCTCTGCCCCAGTGTCCCAAGGCCCTTCTGGAAGAGCCTGACTTCTCAAAAAACAGAGAAGGAGCCCAGTCCTAGAGAAGGGAATGATTACTGGGTTTAAGGGGCTTTGCTTTCCAAGAATACTTTTCCTGCCTTCCTTCTTTGCTATATGCAAACCTTAGCCCTGGTGCGGTGGCTCATACACCTCATGCATGCTACCTCTCCAGCATAAAAAGGACCAGCTTGTCCAGGGGGATGCAGCCCCATGCTCTGGCTGTAACTGTGAAGGGAGGCTGGAGAGTGAGTGGGCAAAGCCCCCACCTCAC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10780:HG2_PB_pbsv_15567:HG2_PB_SVrefine2Falcon1plusDovetail_3909:HG4_PB_pbsv_15471:HG4_PB_HySA_22648:HG2_PB_assemblyticsfalcon_9084:HG4_PB_assemblyticsfalcon_8927:HG4_PB_SVrefine2PBcRDovetail_7730:HG4_PB_SVrefine2Falcon1Dovetail_9480:HG4_Ill_MetaSV_1738:HG4_Ill_GATKHCSBGrefine_10666:HG3_Ill_SVrefine2DISCOVARDovetail_11167:HG2_PB_SVrefine2PB10Xhap12_11250:HG2_Ill_GATKHCSBGrefine_10310;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10780:HG4_PB_assemblyticsfalcon_8927:HG4_PB_SVrefine2PBcRDovetail_7730:HG4_PB_SVrefine2Falcon1Dovetail_9480:HG4_Ill_MetaSV_1738:HG4_Ill_GATKHCSBGrefine_10666:HG3_Ill_SVrefine2DISCOVARDovetail_11167:HG2_PB_SVrefine2PB10Xhap12_11250:HG2_Ill_GATKHCSBGrefine_10310;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00839161;ClusterMaxSizeDiff=0.0083682;ClusterMaxEditDist=0.013986;PBcalls=9;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-359;DistBack=2167;DistForward=-341;DistMin=-341;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=363;REFWIDENED=15:79804634-79805355;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1257.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:23:0|1:40:0:1:23:./.:0:4:27:0:0/1:28:10:0/1:10:4:.:.:.
chr15	79844900	HG2_PB_SVrefine2PB10Xhap12_11252	ACAGTACATCTACTAGACTTATTTCAAATCTTGTAATGCAAAAATATGGATTACTTTTTCTTTTAAAGTATATGTAGTCGGTCTGTAAGCAAAAAATCATCATATGCTAAATCATAAAGAAAACACTGGTGAGTACCTT	TAG	20	PASS	ClusterIDs=HG4_PB_pbsv_15472:HG4_Ill_GATKHCSBGrefine_10667:HG4_CG_vcfBeta_9824:HG2_Ill_GATKHCSBGrefine_10311:HG2_PB_HySA_28349:HG4_Ill_manta_3638:HG4_Ill_Cortex_1210:HG2_PB_assemblyticsfalcon_9085:HG2_PB_SVrefine2PBcRplusDovetail_3667:HG2_PB_SVrefine2PB10Xhap12_11252:HG2_PB_SVrefine2Falcon1plusDovetail_3910:HG2_Ill_manta_4278:HG2_Ill_SVrefine2DISCOVARplusDovetail_4356:HG2_Ill_Cortex_2934:HG2_10X_SVrefine210Xhap12_10781:HG2_Ill_SpiralSDKrefine_5682:HG2_PB_pbsv_15568:HG4_Ill_Spiral_1213:HG2_Ill_Spiral_1027:HG2_PB_SVrefine2PB10Xhap12_11251:HG2_PB_PB10Xdip_10855:HG2_PB_PB10Xdip_10854:HG4_Ill_MetaSV_1739:HG4_10X_allpass_2853:HG2_Ill_MetaSV_1684:HG2_10X_allpass_2443:HG2_Ill_Krunchall_21043;NumClusterSVs=27;ExactMatchIDs=HG2_PB_PB10Xdip_10854:HG2_10X_SVrefine210Xhap12_10781:HG2_Ill_Cortex_2934:HG2_Ill_SVrefine2DISCOVARplusDovetail_4356:HG2_Ill_manta_4278:HG2_PB_SVrefine2Falcon1plusDovetail_3910:HG2_PB_SVrefine2PB10Xhap12_11252:HG2_PB_SVrefine2PBcRplusDovetail_3667:HG2_PB_assemblyticsfalcon_9085:HG4_Ill_Cortex_1210:HG4_Ill_manta_3638;NumExactMatchSVs=11;ClusterMaxShiftDist=0.121212;ClusterMaxSizeDiff=0.121212;ClusterMaxEditDist=0.121212;PBcalls=10;Illcalls=13;TenXcalls=3;CGcalls=1;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=0;HG4count=8;NumTechs=4;NumTechsExact=3;SVLEN=-136;DistBack=-74;DistForward=-63;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=15:79844900-79845038;PctSeqSimilarity=0.9891;PctSizeSimilarity=0.9926;PctRecOverlap=0.9784;SizeDiff=1;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1258.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:44:0|1:29:3:3:41:1|0:0:23:52:0:0/1:49:28:./.:.:.:.:.:.
chr15	79867237	HG2_PB_assemblyticsPBcR_8796	GCCTGCAGTTGGTAGGTGCTGTATAATGTTGACTGCCACCTGCAGTTGGTAGGTGCTGTATAATGTTGACTGCCA	G	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_8796:HG2_PB_pbsv_15569:HG4_PB_pbsv_15473:HG2_PB_assemblyticsfalcon_9086;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsPBcR_8796:HG2_PB_assemblyticsfalcon_9086;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0135135;ClusterMaxSizeDiff=0.0134228;ClusterMaxEditDist=0.027027;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-74;DistBack=-39;DistForward=-75;DistMin=-75;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=262;REFWIDENED=15:79867238-79867573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1259.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:50:0|1:37:3:2:44:./.:0:1:0:1:./.:0:2:./.:.:.:.:.:.
chr15	79891843	HG4_10X_allpass_2854	TAGAAGCACAGAGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATTCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10783:HG4_Ill_Spiral_1214:HG2_Ill_Spiral_1028:HG4_PB_assemblyticsfalcon_8928:HG3_PB_assemblyticsfalcon_9056:HG4_Ill_Krunchall_21353:HG2_Ill_Krunchall_21044:HG2_PB_pbsv_15570:HG4_PB_pbsv_15474:HG4_Ill_MetaSV_1740:HG4_PB_SVrefine2Falcon1Dovetail_9481:HG4_Ill_manta_3639:HG4_Ill_SVrefine2DISCOVARDovetail_10993:HG4_10X_allpass_2854:HG2_Ill_manta_4279:HG2_Ill_SVrefine2DISCOVARplusDovetail_4357:HG2_Ill_MetaSV_1685:HG2_10X_allpass_2444;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10783:HG4_PB_SVrefine2Falcon1Dovetail_9481:HG4_Ill_manta_3639:HG4_Ill_SVrefine2DISCOVARDovetail_10993:HG4_10X_allpass_2854:HG2_Ill_manta_4279:HG2_Ill_SVrefine2DISCOVARplusDovetail_4357:HG2_Ill_MetaSV_1685:HG2_10X_allpass_2444;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00621118;ClusterMaxSizeDiff=0.00621118;ClusterMaxEditDist=0.00927357;PBcalls=5;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=24401;DistForward=-309;DistMin=-309;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=15:79891844-79892177;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:26:0|1:44:0:2:22:1|0:0:16:20:0:0/1:24:19:0/1:26:9:.:.:.
chr15	79911586	HG2_PB_SVrefine2PB10Xhap12_11253	TCTTGTTGCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_15475:HG2_PB_assemblyticsPBcR_8797:HG2_PB_assemblyticsfalcon_9087:HG4_PB_assemblyticsfalcon_8929:HG4_Ill_Krunchall_21354:HG2_Ill_Krunchall_21045:HG2_PB_HySA_28351:HG4_Ill_MetaSV_1741:HG2_Ill_tnscope_1701:HG2_Ill_breakscan11_2236:HG4_PB_SVrefine2PBcRDovetail_7731:HG4_PB_SVrefine2Falcon1Dovetail_9482:HG4_Ill_scalpel_14289:HG4_Ill_manta_3640:HG4_Ill_SVrefine2DISCOVARDovetail_10994:HG4_Ill_GATKHCSBGrefine_10670:HG4_10X_allpass_2855:HG2_PB_pbsv_15571:HG2_PB_SVrefine2PBcRplusDovetail_3668:HG2_PB_SVrefine2PB10Xhap12_11253:HG2_PB_SVrefine2Falcon1plusDovetail_3911:HG2_Ill_manta_4280:HG2_Ill_MetaSV_1686:HG2_Ill_GATKHCSBGrefine_10314:HG2_10X_SVrefine210Xhap12_10784;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10784:HG2_Ill_GATKHCSBGrefine_10314:HG2_Ill_MetaSV_1686:HG2_Ill_manta_4280:HG2_PB_SVrefine2Falcon1plusDovetail_3911:HG2_PB_SVrefine2PB10Xhap12_11253:HG2_PB_SVrefine2PBcRplusDovetail_3668:HG2_PB_pbsv_15571:HG4_10X_allpass_2855:HG4_Ill_GATKHCSBGrefine_10670:HG4_Ill_SVrefine2DISCOVARDovetail_10994:HG4_Ill_manta_3640:HG4_Ill_scalpel_14289:HG4_PB_SVrefine2Falcon1Dovetail_9482:HG4_PB_SVrefine2PBcRDovetail_7731;NumExactMatchSVs=15;ClusterMaxShiftDist=0.101473;ClusterMaxSizeDiff=0.101473;ClusterMaxEditDist=0.101473;PBcalls=11;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=19404;DistForward=57926;DistMin=19404;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=15:79911587-79911914;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:45:0|1:29:0:2:41:1|0:0:22:44:0:0/1:34:23:0/1:27:10:.:.:.
chr15	80110712	HG2_Ill_GATKHCSBGrefine_10315	GTGAGCCACCGCGCTGGGCCTTCTTTTTTTTTTTTTTTTTTAAGTTGGAATCTCATTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCGATCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTTGCAAGTAGCTGGGACTACAGGTGTGTGTCACCACGCCCAGCTAATTTTTTTATTTTTAGTAGAGATGGGTTTTCACAATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10785:HG2_Ill_MetaSV_1687:HG4_PB_pbsv_15477:HG4_Ill_scalpel_14292:HG4_Ill_GATKHCSBGrefine_10672:HG2_Ill_scalpel_14681:HG2_Ill_GATKHCSBGrefine_10315:HG2_10X_allpass_2445:HG4_PB_HySA_22650:HG2_PB_pbsv_15572:HG2_PB_PB10Xdip_10857:HG4_PB_SVrefine2PBcRDovetail_7732:HG4_Ill_SVrefine2DISCOVARDovetail_10996:HG2_PB_SVrefine2PB10Xhap12_11254;NumClusterSVs=14;ExactMatchIDs=HG2_10X_allpass_2445:HG2_Ill_GATKHCSBGrefine_10315:HG2_Ill_scalpel_14681:HG4_Ill_GATKHCSBGrefine_10672:HG4_Ill_scalpel_14292:HG4_PB_pbsv_15477;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0207612;ClusterMaxSizeDiff=0.0138408;ClusterMaxEditDist=0.137931;PBcalls=6;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-287;DistBack=-260;DistForward=-288;DistMin=-288;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=214;REFWIDENED=15:80110511-80111011;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:17:./.:27:2:6:13:./.:0:26:36:2:0/1:30:13:./.:.:.:.:.:.
chr15	80202213	HG2_PB_SVrefine2PBcRplusDovetail_3669	TCTCAATAGGTTAACATTAAAGAGGAAGTAAACCAAGTTAAAAGTTCAGAACTTCA	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_20692:HG3_PB_pbsv_15221:HG2_PB_pbsv_15573:HG3_PB_HySA_23485:HG2_PB_HySA_28354:HG3_PB_SVrefine2PBcRDovetail_7328:HG3_Ill_SVrefine2DISCOVARDovetail_11169:HG3_Ill_250bpfermikitraw_20086:HG2_PB_SVrefine2PBcRplusDovetail_3669:HG2_PB_SVrefine2PB10Xhap12_11255:HG2_PB_SVrefine2Falcon1plusDovetail_3912:HG2_Ill_SpiralSDKrefine_5686;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20692:HG3_PB_SVrefine2PBcRDovetail_7328:HG3_Ill_SVrefine2DISCOVARDovetail_11169:HG3_Ill_250bpfermikitraw_20086:HG2_PB_SVrefine2PBcRplusDovetail_3669:HG2_PB_SVrefine2PB10Xhap12_11255:HG2_PB_SVrefine2Falcon1plusDovetail_3912:HG2_Ill_SpiralSDKrefine_5686;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.0701754;PBcalls=8;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=1;DistForward=6619;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=111;REFWIDENED=15:80202214-80202379;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:25:0:2:27:./.:11:0:0:2:0/1:24:17:./.:.:.:.:.:.
chr15	81422131	HG2_Ill_Krunchall_21061	CTTTTTTGCCTACATTGAAAATCAGGCATTAACTTTTTTCTCTGTGAAAGTCCTAGATGACATCTTCTAATGTAAGGCT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_8811:HG2_Ill_scalpel_14689:HG2_PB_pbsv_15582:HG4_Ill_GATKHCSBGrefine_10676:HG2_Ill_GATKHCSBGrefine_10318:HG4_Ill_scalpel_14298:HG2_Ill_scalpel_14688:HG2_Ill_Krunchall_21061:HG2_Ill_250bpfermikitraw_20703:HG2_Ill_150bpfermikitraw_19532:HG2_Ill_Spiral_1029:HG4_PB_pbsv_15483;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19532:HG2_Ill_250bpfermikitraw_20703:HG2_Ill_Krunchall_21061:HG2_Ill_scalpel_14688:HG4_Ill_scalpel_14298;NumExactMatchSVs=5;ClusterMaxShiftDist=0.119205;ClusterMaxSizeDiff=0.119205;ClusterMaxEditDist=0.135135;PBcalls=3;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=9877;DistForward=3307;DistMin=3307;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=137;REFWIDENED=15:81422079-81422293;PctSeqSimilarity=0.9882;PctSizeSimilarity=0.9872;PctRecOverlap=0.557;SizeDiff=1;StartDistance=34;EndDistance=35;GTMatch=0;TruScore=84;MatchId=1264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:40:0|1:25:1:2:34:1|0:0:5:19:1:0/1:18:13:./.:.:.:.:.:.
chr15	81615580	HG2_PB_SVrefine2PBcRplusDovetail_3673	TTAATGAAAAGTCAGAAGGGTCAAGCAAAACTACTCCCATGCTACCCTCTGGCAACGACAAAGAGAGGGGTTCATGCTG	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_20704:HG3_PB_pbsv_15229:HG2_PB_pbsv_15583:HG2_PB_SVrefine2PBcRplusDovetail_3673:HG2_Ill_GATKHCSBGrefine_10319;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20704:HG2_PB_SVrefine2PBcRplusDovetail_3673:HG2_Ill_GATKHCSBGrefine_10319;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0128205;ClusterMaxSizeDiff=0.0127389;ClusterMaxEditDist=0.025641;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-78;DistBack=-1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=241;REFWIDENED=15:81615581-81615899;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:23:./.:33:8:7:14:./.:1:0:0:2:0/1:8:8:./.:.:.:.:.:.
chr15	83275270	HG2_Ill_GATKHCSBGrefine_10322	TAAAAATACATAGTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2237:HG3_PB_assemblyticsfalcon_9068:HG3_PB_SVrefine2Falcon1Dovetail_9434:HG4_PB_SVrefine2PBcRDovetail_7735:HG4_PB_pbsv_15484:HG2_PB_pbsv_15585:HG2_Ill_Krunchall_21063:HG4_Ill_Spiral_1215:HG2_Ill_Spiral_1030:HG4_Ill_SVrefine2DISCOVARDovetail_11003:HG4_Ill_GATKHCSBGrefine_10677:HG4_10X_allpass_2856:HG2_PB_assemblyticsfalcon_9103:HG2_PB_SVrefine2Falcon1plusDovetail_3920:HG2_Ill_manta_4281:HG2_Ill_MetaSV_1691:HG2_Ill_GATKHCSBGrefine_10322:HG2_10X_allpass_2446;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_2446:HG2_Ill_GATKHCSBGrefine_10322:HG2_Ill_MetaSV_1691:HG2_Ill_manta_4281:HG2_PB_SVrefine2Falcon1plusDovetail_3920:HG2_PB_assemblyticsfalcon_9103:HG4_10X_allpass_2856:HG4_Ill_GATKHCSBGrefine_10677:HG4_Ill_SVrefine2DISCOVARDovetail_11003;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0191693;ClusterMaxSizeDiff=0.0191693;ClusterMaxEditDist=0.057508;PBcalls=7;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=-328;DistForward=-1;DistMin=-328;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=83;REFWIDENED=15:83275271-83275664;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1266.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:30:0|1:25:1:1:21:0|1:48:0:0:13:0/1:27:26:0/1:17:7:.:.:.
chr15	83551620	HG2_PB_SVrefine2PB10Xhap12_11265	ACACCAGCCACTGCTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCATCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAGTGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCGTTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATCTGGCTCTCTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTTTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCATGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTCTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGACTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTGGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGATTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAACATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTCCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGATCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCAGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCC	A	20	PASS	ClusterIDs=HG3_Ill_Krunchall_20652:HG4_PB_assemblyticsfalcon_8946:HG3_PB_assemblyticsfalcon_9071:HG2_PB_assemblyticsfalcon_9105:HG2_PB_assemblyticsPBcR_8819:HG2_10X_allpass_2447:HG3_PB_pbsv_15234:HG3_10X_allpass_3005:HG4_10X_allpass_2857:HG2_Ill_tnscope_1702:HG4_PB_pbsv_15485:HG4_PB_SVrefine2PBcRDovetail_7736:HG4_Ill_SVrefine2DISCOVARDovetail_11007:HG4_Ill_GATKHCSBGrefine_10678:HG3_PB_SVrefine2PBcRDovetail_7336:HG3_PB_SVrefine2Falcon1Dovetail_9435:HG3_Ill_SVrefine2DISCOVARDovetail_11191:HG3_Ill_GATKHCSBGrefine_10230:HG2_PB_pbsv_15586:HG2_PB_SVrefine2PBcRplusDovetail_3676:HG2_PB_SVrefine2PB10Xhap12_11265:HG2_Ill_SVrefine2DISCOVARplusDovetail_4368:HG2_Ill_GATKHCSBGrefine_10323:HG2_10X_SVrefine210Xhap12_10792:HG2_PB_HySA_28382:HG4_Ill_MetaSV_1746:HG3_Ill_MetaSV_1800:HG2_Ill_MetaSV_1692:HG4_Ill_Krunchall_21370;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10792:HG2_Ill_GATKHCSBGrefine_10323:HG2_Ill_SVrefine2DISCOVARplusDovetail_4368:HG2_PB_SVrefine2PB10Xhap12_11265:HG2_PB_SVrefine2PBcRplusDovetail_3676:HG2_PB_pbsv_15586:HG3_Ill_GATKHCSBGrefine_10230:HG3_Ill_SVrefine2DISCOVARDovetail_11191:HG3_PB_SVrefine2Falcon1Dovetail_9435:HG3_PB_SVrefine2PBcRDovetail_7336:HG4_Ill_GATKHCSBGrefine_10678:HG4_Ill_SVrefine2DISCOVARDovetail_11007:HG4_PB_SVrefine2PBcRDovetail_7736:HG4_PB_pbsv_15485;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00677686;ClusterMaxSizeDiff=0.00677686;ClusterMaxEditDist=0.00677686;PBcalls=13;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6050;DistBack=13417;DistForward=-6040;DistMin=-6040;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=15:83551621-83557685;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:117:1/1:0:32:0:12:1/1:0:25:0:25:1/1:0:30:1/1:1:359:6037:.:.
chr15	83666473	HG2_PB_SVrefine2PB10Xhap12_11266	ACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCAGGGCAGGGGGGCTGACCCCCCCCCACCTC	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11266:HG2_PB_assemblyticsfalcon_9106:HG3_PB_SVrefine2Falcon1Dovetail_9436:HG2_PB_SVrefine2Falcon1plusDovetail_3921:HG4_PB_pbsv_15486:HG2_PB_pbsv_15587:HG3_PB_pbsv_15235:HG3_PB_SVrefine2PBcRDovetail_7337;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11266:HG3_PB_SVrefine2PBcRDovetail_7337;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0233463;ClusterMaxSizeDiff=0.0233463;ClusterMaxEditDist=0.0856031;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-129;DistBack=20141;DistForward=-103;DistMin=-103;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10193;REFWIDENED=15:83656830-83676383;PctSeqSimilarity=0.9781;PctSizeSimilarity=0.9923;PctRecOverlap=0.8626;SizeDiff=-1;StartDistance=-17;EndDistance=-18;GTMatch=0;TruScore=94;MatchId=1268.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:0|1:22:1:3:23:0/0:12:0:8:0:0/1:33:5:./.:.:.:.:.:.
chr15	84280619	HG3_Ill_manta_3490	ACTTTTGTGTCAAGGGAAAATTCACACACTGTCCCTCAGGCGGGCAGCAACTTAATTTCTCTTTAGCTGAACTGAACTTGCTTGCAAGCCTCTATGTAGACCAATGGCGGAAACAACTTAATCTTTTTTCCATTTCTGTTGTTGACCAAAAAAAAAAAAAAGCTTTAAAATCTTTTTTCCATTTCTTCTAATGGTGGAAAAAAGCATAAT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_15589:HG3_PB_HySA_23516:HG4_PB_assemblyticsfalcon_8951:HG2_PB_assemblyticsfalcon_9112:HG3_Ill_Krunchall_20657:HG2_PB_assemblyticsPBcR_8826:HG2_Ill_MetaSV_1693:HG4_PB_SVrefine2Falcon1Dovetail_9491:HG3_PB_pbsv_15237:HG3_PB_assemblyticsfalcon_9077:HG3_PB_SVrefine2PBcRDovetail_7338:HG3_PB_SVrefine2Falcon1Dovetail_9437:HG3_Ill_svaba_19531:HG3_Ill_scalpel_14960:HG3_Ill_manta_3490:HG3_Ill_MetaSV_1801:HG3_Ill_GATKHCSBGrefine_10233:HG3_10X_allpass_3006:HG2_PB_SVrefine2PBcRplusDovetail_3678:HG2_PB_SVrefine2Falcon1plusDovetail_3922:HG2_Ill_svaba_19382:HG2_Ill_scalpel_14700:HG2_Ill_breakscan11_2238:HG2_Ill_SpiralSDKrefine_5703:HG2_Ill_SVrefine2DISCOVARplusDovetail_4371:HG2_Ill_GATKHCSBGrefine_10326:HG2_10X_allpass_2448;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_2448:HG2_Ill_GATKHCSBGrefine_10326:HG2_Ill_SVrefine2DISCOVARplusDovetail_4371:HG2_Ill_SpiralSDKrefine_5703:HG2_Ill_breakscan11_2238:HG2_Ill_scalpel_14700:HG2_Ill_svaba_19382:HG2_PB_SVrefine2Falcon1plusDovetail_3922:HG2_PB_SVrefine2PBcRplusDovetail_3678:HG3_10X_allpass_3006:HG3_Ill_GATKHCSBGrefine_10233:HG3_Ill_MetaSV_1801:HG3_Ill_manta_3490:HG3_Ill_scalpel_14960:HG3_Ill_svaba_19531:HG3_PB_SVrefine2Falcon1Dovetail_9437:HG3_PB_SVrefine2PBcRDovetail_7338:HG3_PB_assemblyticsfalcon_9077:HG3_PB_pbsv_15237:HG4_PB_SVrefine2Falcon1Dovetail_9491;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0238663;ClusterMaxSizeDiff=0.0238663;ClusterMaxEditDist=0.0238663;PBcalls=12;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=12;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-209;DistBack=49804;DistForward=-202;DistMin=-202;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=15:84280620-84280831;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:26:./.:21:5:7:17:1|0:0:9:34:0:0/1:43:20:./.:.:.:.:.:.
chr15	86396663	HG2_Ill_GATKHCSBGrefine_10333	AGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCTGAGGTGAGTGGATCACCTGAGGTCAGGAGTGCCAGACCAGCCTGGCCAACATAGTGAAACCCCATCTCTACTAAAAATAAAAAATTAGTTGGGCGTGATGGCGGGCACCTGTAATCCCACCTACTTGGGAGGCTGAGGCAGGAGAATCATTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGACTGCACCATTGCACTCCAGCCTGGGCAACAAGAGCGATACTCCATCTCAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAAAAGAAAATAAAGAAAATTGACTTGTTGCACACTCAAATGTGTGAGCTAGAAGCCATAGAAGCCACACAGGCCAGACAAATGAATAAAATGATAAAGGAGGACTTCATTTATTTTTAATCCTCAGGAATCTTACTCTCCCATGGATCAGGTGTTGGTTTGTCTTTGTTGTTATATGTGACAATCAAGGGACCTAGCCATTCCGGCGTTTTTTTGAAGTAAGCATGAGGTGGCTGGGCGCGGTG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4378:HG2_Ill_Krunchall_21083:HG3_PB_pbsv_15247:HG3_Ill_manta_3491:HG3_Ill_MetaSV_1804:HG3_Ill_GATKHCSBGrefine_10241:HG3_10X_allpass_3007:HG2_Ill_SpiralSDKrefine_5716:HG2_Ill_MetaSV_1696:HG2_Ill_GATKHCSBGrefine_10333:HG2_10X_allpass_2450:HG2_PB_pbsv_15599:HG2_Ill_tnscope_1703:HG4_PB_SVrefine2Falcon1Dovetail_9500:HG2_PB_SVrefine2PB10Xhap12_11275:HG2_PB_SVrefine2Falcon2Bionano_7720;NumClusterSVs=16;ExactMatchIDs=HG2_10X_allpass_2450:HG2_Ill_GATKHCSBGrefine_10333:HG2_Ill_MetaSV_1696:HG2_Ill_SpiralSDKrefine_5716:HG3_10X_allpass_3007:HG3_Ill_GATKHCSBGrefine_10241:HG3_Ill_MetaSV_1804:HG3_Ill_manta_3491;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00369004;ClusterMaxSizeDiff=0.00369004;ClusterMaxEditDist=0.00739372;PBcalls=5;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-541;DistBack=9851;DistForward=-448;DistMin=-448;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=268;REFWIDENED=15:86396650-86397458;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1270.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:33:0|1:30:0:0:29:1|0:0:24:84:0:0/1:43:19:0/1:33:9:.:.:.
chr15	86474074	HG4_PB_SVrefine2Falcon1Dovetail_9501	ACCTCCCTCTCCTCCCTTCTCTCTACCCCCCTCTCCTGCCTTCTCTCTACCCCCCTCTCCTCCCTTCTCTCTACCCCCCTCTCCTCCCTTCTCTCTACC	A	10	PASS	ClusterIDs=HG4_PB_pbsv_15501:HG3_PB_SVrefine2Falcon1Dovetail_9443:HG3_PB_assemblyticsfalcon_9097:HG4_PB_assemblyticsfalcon_8973:HG4_PB_SVrefine2Falcon1Dovetail_9501:HG4_PB_HySA_22706:HG4_PB_SVrefine2PBcRDovetail_7743:HG2_PB_SVrefine2PBcRplusDovetail_3684:HG2_PB_assemblyticsPBcR_8844:HG3_PB_pbsv_15248:HG2_PB_SVrefine2PB10Xhap12_11276:HG2_PB_pbsv_15601;NumClusterSVs=12;ExactMatchIDs=HG4_PB_HySA_22706:HG4_PB_SVrefine2Falcon1Dovetail_9501:HG4_PB_assemblyticsfalcon_8973;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0729167;ClusterMaxSizeDiff=0.0729167;ClusterMaxEditDist=0.115789;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=5;NumTechs=1;NumTechsExact=1;SVLEN=-98;DistBack=40;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=477;REFWIDENED=15:86473656-86474206;PctSeqSimilarity=0.9885;PctSizeSimilarity=0.9796;PctRecOverlap=0.6263;SizeDiff=2;StartDistance=35;EndDistance=37;GTMatch=0;TruScore=86;MatchId=1271.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:24:0|1:19:3:1:20:./.:97:6:12:3:./.:2:0:./.:.:.:.:.:.
chr15	87370549	HG4_Ill_GATKHCSBGrefine_10693	CACACACATATATATATATATGTGTATATATATATATATATATATGTGTGTGTATATAT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_15253:HG3_PB_HySA_23543:HG2_PB_pbsv_15606:HG4_Ill_GATKHC_24746:HG4_Ill_GATKHCSBGrefine_10693;NumClusterSVs=5;ExactMatchIDs=HG4_Ill_GATKHCSBGrefine_10693:HG4_Ill_GATKHC_24746;NumExactMatchSVs=2;ClusterMaxShiftDist=0.238806;ClusterMaxSizeDiff=0.238806;ClusterMaxEditDist=0.255639;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-58;DistBack=11;DistForward=-58;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=176;REFWIDENED=15:87370519-87370752;PctSeqSimilarity=0.8923;PctSizeSimilarity=0.8056;PctRecOverlap=0.7123;SizeDiff=-14;StartDistance=21;EndDistance=7;GTMatch=1;TruScore=80;MatchId=1272.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:0/1:14:39:1/1:5:16:6:20:./.:6:6:4:2:0/1:8:11:./.:.:.:.:.:.
chr15	89195551	HG4_PB_SVrefine2PBcRDovetail_7750	TCCTCGTCCTTCTCCTCCTCCCCCCTCCTCCCCCTCCTCCCCCTCCTCCTCACCCATCTCCATTTCCTCCCCCTCCTCCCCCTCCTCCTCCCCCTCCTCCTCCC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11284:HG2_PB_PB10Xdip_11108:HG2_PB_HySA_28434:HG4_PB_pbsv_15513:HG2_PB_pbsv_15612:HG4_PB_HySA_22720:HG4_PB_SVrefine2PBcRDovetail_7750:HG2_PB_SVrefine2PBcRplusDovetail_3691;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11284:HG4_PB_SVrefine2PBcRDovetail_7750:HG2_PB_SVrefine2PBcRplusDovetail_3691;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0995025;ClusterMaxSizeDiff=0.0895522;ClusterMaxEditDist=0.138614;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-103;DistBack=56137;DistForward=-86;DistMin=-86;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=227;REFWIDENED=15:89195552-89195881;PctSeqSimilarity=0.9;PctSizeSimilarity=0.9417;PctRecOverlap=0.2596;SizeDiff=6;StartDistance=-77;EndDistance=-71;GTMatch=0;TruScore=70;MatchId=1274.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:42:./.:3:19:10:18:./.:7:2:19:2:./.:8:0:./.:.:.:.:.:.
chr15	90289092	HG2_Ill_svaba_19426	CACAGGATCCACACACCAACACCTCCACACATCCACACCTCCAAAGAGCATCCACACCTCCACTCCTCCCA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_15268:HG2_PB_assemblyticsPBcR_8871:HG2_PB_pbsv_15618:HG4_PB_pbsv_15522:HG4_Ill_svaba_19387:HG4_Ill_manta_3645:HG4_Ill_GATKHC_24773:HG4_Ill_GATKHCSBGrefine_10700:HG4_Ill_250bpfermikitraw_20408:HG4_Ill_150bpfermikitraw_19666:HG3_Ill_svaba_19581:HG3_Ill_GATKHC_24742:HG3_Ill_GATKHCSBGrefine_10249:HG3_Ill_150bpfermikitraw_19618:HG2_PB_assemblyticsfalcon_9158:HG2_Ill_svaba_19426:HG2_Ill_manta_4289:HG2_Ill_Krunchall_21110:HG2_Ill_GATKHC_24895:HG2_Ill_GATKHCSBGrefine_10344:HG2_Ill_250bpfermikitraw_20757:HG2_Ill_150bpfermikitraw_19587;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19587:HG2_Ill_250bpfermikitraw_20757:HG2_Ill_GATKHCSBGrefine_10344:HG2_Ill_GATKHC_24895:HG2_Ill_Krunchall_21110:HG2_Ill_manta_4289:HG2_Ill_svaba_19426:HG2_PB_assemblyticsfalcon_9158:HG3_Ill_150bpfermikitraw_19618:HG3_Ill_GATKHCSBGrefine_10249:HG3_Ill_GATKHC_24742:HG3_Ill_svaba_19581:HG4_Ill_150bpfermikitraw_19666:HG4_Ill_250bpfermikitraw_20408:HG4_Ill_GATKHCSBGrefine_10700:HG4_Ill_GATKHC_24773:HG4_Ill_manta_3645:HG4_Ill_svaba_19387;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0142857;ClusterMaxSizeDiff=0.0141844;ClusterMaxEditDist=0.0285714;PBcalls=5;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=-15;DistForward=508;DistMin=-15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=42;REFWIDENED=15:90289091-90289205;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:43:1/1:2:23:2:9:./.:3:31:1:50:1/1:0:9:./.:.:.:.:.:.
chr15	91402096	HG3_Ill_GATKHCSBGrefine_10257	TAGAAATGTCTTTCATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGATTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10818:HG2_PB_pbsv_15627:HG3_PB_pbsv_15278:HG2_PB_PB10Xdip_11147:HG2_PB_HySA_28471:HG3_PB_HySA_23581:HG3_Ill_MetaSV_1812:HG2_Ill_MetaSV_1702:HG3_Ill_scalpel_15012:HG3_Ill_manta_3494:HG3_Ill_GATKHCSBGrefine_10257:HG3_10X_allpass_3012:HG2_Ill_scalpel_14741:HG2_Ill_manta_4291:HG2_Ill_GATKHCSBGrefine_10351:HG2_10X_allpass_2454:HG2_Ill_breakscan11_2239:HG2_Ill_tnscope_1705:HG4_PB_SVrefine2Falcon1Dovetail_9522:HG3_PB_SVrefine2PBcRDovetail_7359:HG3_PB_SVrefine2Falcon1Dovetail_9465:HG3_Ill_SVrefine2DISCOVARDovetail_11232:HG2_PB_SVrefine2PB10Xhap12_11296:HG2_PB_SVrefine2Falcon1plusDovetail_3948;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_2454:HG2_Ill_GATKHCSBGrefine_10351:HG2_Ill_manta_4291:HG2_Ill_scalpel_14741:HG3_10X_allpass_3012:HG3_Ill_GATKHCSBGrefine_10257:HG3_Ill_manta_3494:HG3_Ill_scalpel_15012;NumExactMatchSVs=8;ClusterMaxShiftDist=0.125413;ClusterMaxSizeDiff=0.125413;ClusterMaxEditDist=0.142132;PBcalls=10;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-320;DistBack=-298;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=177;REFWIDENED=15:91401936-91402432;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1276.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:39:0|1:30:0:0:37:1|0:0:13:22:0:0/1:29:23:0/1:14:7:.:.:.
chr15	92107490	HG3_Ill_250bpfermikitraw_20168	GAACAGTATTTTTTCTCATCAGAAGTTTTTGGTCTAAAGCTATTCTTCTCAGAAAAAACTGACTTTCTAACAGCAACTTCTTATACAGAATA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_15282:HG3_Ill_svaba_19593:HG3_Ill_manta_3495:HG3_Ill_Krunchall_20721:HG3_Ill_GATKHC_24757:HG3_Ill_GATKHCSBGrefine_10259:HG3_Ill_Cortex_1271:HG3_Ill_250bpfermikitraw_20168:HG3_Ill_150bpfermikitraw_19633:HG3_10X_allpass_3014:HG2_PB_pbsv_15632:HG2_PB_assemblyticsfalcon_9179:HG2_PB_SVrefine2Falcon1plusDovetail_3951:HG2_Ill_svaba_19437:HG2_Ill_scalpel_14742:HG2_Ill_manta_4292:HG2_Ill_breakscan11_2240:HG2_Ill_SpiralSDKrefine_5746:HG2_Ill_Krunchall_21122:HG2_Ill_GATKHC_24907:HG2_Ill_GATKHCSBGrefine_10354:HG2_Ill_Cortex_2962:HG2_Ill_250bpfermikitraw_20768:HG2_Ill_150bpfermikitraw_19600:HG2_10X_allpass_2455:HG2_10X_SVrefine210Xhap12_10820;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10820:HG2_10X_allpass_2455:HG2_Ill_150bpfermikitraw_19600:HG2_Ill_250bpfermikitraw_20768:HG2_Ill_Cortex_2962:HG2_Ill_GATKHCSBGrefine_10354:HG2_Ill_GATKHC_24907:HG2_Ill_Krunchall_21122:HG2_Ill_SpiralSDKrefine_5746:HG2_Ill_breakscan11_2240:HG2_Ill_manta_4292:HG2_Ill_scalpel_14742:HG2_Ill_svaba_19437:HG2_PB_SVrefine2Falcon1plusDovetail_3951:HG2_PB_assemblyticsfalcon_9179:HG2_PB_pbsv_15632:HG3_10X_allpass_3014:HG3_Ill_150bpfermikitraw_19633:HG3_Ill_250bpfermikitraw_20168:HG3_Ill_Cortex_1271:HG3_Ill_GATKHCSBGrefine_10259:HG3_Ill_GATKHC_24757:HG3_Ill_Krunchall_20721:HG3_Ill_manta_3495:HG3_Ill_svaba_19593;NumExactMatchSVs=25;ClusterMaxShiftDist=0.010929;ClusterMaxSizeDiff=0.010929;ClusterMaxEditDist=0.010929;PBcalls=4;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-91;DistBack=124032;DistForward=-85;DistMin=-85;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=15:92107491-92107582;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:28:0|1:31:0:3:23:1|0:0:35:24:0:0/1:33:15:./.:.:.:.:.:.
chr15	93515787	HG4_Ill_SVrefine2DISCOVARDovetail_11042	TAAGATTCCAGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_1220:HG4_Ill_Krunchall_21438:HG3_Ill_Krunchall_20735:HG2_Ill_Krunchall_21131:HG4_PB_assemblyticsfalcon_9027:HG2_PB_assemblyticsfalcon_9192:HG3_PB_assemblyticsfalcon_9165:HG2_PB_assemblyticsPBcR_8896:HG3_Ill_Spiral_16136:HG2_PB_HySA_28498:HG2_Ill_Spiral_1033:HG3_PB_pbsv_15301:HG4_Ill_MetaSV_1759:HG3_Ill_MetaSV_1817:HG2_Ill_tnscope_1706:HG2_Ill_MetaSV_1706:HG4_PB_pbsv_15549:HG4_PB_SVrefine2PBcRDovetail_7771:HG4_PB_SVrefine2Falcon1Dovetail_9532:HG4_Ill_scalpel_14352:HG4_Ill_manta_3648:HG4_Ill_SVrefine2DISCOVARDovetail_11042:HG4_Ill_GATKHCSBGrefine_10714:HG4_10X_allpass_2866:HG3_PB_SVrefine2PBcRDovetail_7369:HG3_PB_SVrefine2Falcon1Dovetail_9476:HG3_Ill_scalpel_15024:HG3_Ill_manta_3501:HG3_Ill_SVrefine2DISCOVARDovetail_11244:HG3_Ill_GATKHCSBGrefine_10274:HG3_10X_allpass_3016:HG2_PB_pbsv_15646:HG2_PB_SVrefine2PBcRplusDovetail_3708:HG2_PB_SVrefine2PB10Xhap12_11308:HG2_PB_SVrefine2Falcon2Bionano_7744:HG2_PB_SVrefine2Falcon1plusDovetail_3960:HG2_Ill_scalpel_14750:HG2_Ill_manta_4295:HG2_Ill_SVrefine2DISCOVARplusDovetail_4406:HG2_Ill_GATKHCSBGrefine_10367:HG2_10X_SVrefine210Xhap12_10826:HG2_Ill_breakscan11_2242;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10826:HG2_Ill_GATKHCSBGrefine_10367:HG2_Ill_SVrefine2DISCOVARplusDovetail_4406:HG2_Ill_manta_4295:HG2_Ill_scalpel_14750:HG2_PB_SVrefine2Falcon1plusDovetail_3960:HG2_PB_SVrefine2Falcon2Bionano_7744:HG2_PB_SVrefine2PB10Xhap12_11308:HG2_PB_SVrefine2PBcRplusDovetail_3708:HG2_PB_pbsv_15646:HG3_10X_allpass_3016:HG3_Ill_GATKHCSBGrefine_10274:HG3_Ill_SVrefine2DISCOVARDovetail_11244:HG3_Ill_manta_3501:HG3_Ill_scalpel_15024:HG3_PB_SVrefine2Falcon1Dovetail_9476:HG3_PB_SVrefine2PBcRDovetail_7369:HG4_10X_allpass_2866:HG4_Ill_GATKHCSBGrefine_10714:HG4_Ill_SVrefine2DISCOVARDovetail_11042:HG4_Ill_manta_3648:HG4_Ill_scalpel_14352:HG4_PB_SVrefine2Falcon1Dovetail_9532:HG4_PB_SVrefine2PBcRDovetail_7771:HG4_PB_pbsv_15549;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0678514;ClusterMaxSizeDiff=0.0678514;ClusterMaxEditDist=0.0678514;PBcalls=16;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=28796;DistForward=-303;DistMin=-303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=15:93515788-93516111;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1278.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:1/1:0:23:0:25:1/1:0:34:0:37:1/1:0:49:0/1:1:8:.:.:.
chr15	93747485	HG4_Ill_250bpfermikitraw_20441	GAGAGAGAGAGACAGACAGACAGACAGAGAGAGAGAGACAGAGAGAGAGAGAGACAGAGAT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_15648:HG2_PB_HySA_28501:HG2_PB_assemblyticsfalcon_9193:HG3_PB_assemblyticsfalcon_9167:HG3_Ill_svaba_19610:HG3_Ill_GATKHC_24773:HG3_Ill_GATKHCSBGrefine_10277:HG2_Ill_GATKHC_24926:HG2_Ill_GATKHCSBGrefine_10369:HG3_Ill_scalpel_15027:HG3_Ill_Krunchall_20739:HG3_Ill_250bpfermikitraw_20188:HG3_Ill_150bpfermikitraw_19652:HG2_Ill_svaba_19453:HG2_Ill_scalpel_14754:HG2_Ill_Krunchall_21135:HG2_Ill_250bpfermikitraw_20783:HG2_Ill_150bpfermikitraw_19616:HG4_PB_HySA_22768:HG3_Ill_manta_3502:HG3_Ill_Spiral_16138:HG4_PB_pbsv_15551:HG4_Ill_svaba_19416:HG4_Ill_scalpel_14356:HG4_Ill_manta_3649:HG4_Ill_Krunchall_21442:HG4_Ill_GATKHC_24808:HG4_Ill_GATKHCSBGrefine_10715:HG4_Ill_250bpfermikitraw_20441:HG3_Ill_svaba_19609:HG3_Ill_scalpel_15026:HG3_Ill_Krunchall_20738:HG3_Ill_GATKHC_24772:HG3_Ill_GATKHCSBGrefine_10276:HG3_Ill_250bpfermikitraw_20187:HG3_Ill_150bpfermikitraw_19651:HG2_Ill_svaba_19452:HG2_Ill_scalpel_14753:HG2_Ill_manta_4296:HG2_Ill_Krunchall_21134:HG2_Ill_GATKHC_24925:HG2_Ill_GATKHCSBGrefine_10368:HG2_Ill_250bpfermikitraw_20782:HG2_Ill_150bpfermikitraw_19615:HG3_PB_pbsv_15304:HG4_PB_assemblyticsfalcon_9032:HG3_PB_HySA_23602:HG2_PB_assemblyticsPBcR_8898;NumClusterSVs=48;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19615:HG2_Ill_250bpfermikitraw_20782:HG2_Ill_GATKHCSBGrefine_10368:HG2_Ill_GATKHC_24925:HG2_Ill_Krunchall_21134:HG2_Ill_manta_4296:HG2_Ill_scalpel_14753:HG2_Ill_svaba_19452:HG3_Ill_150bpfermikitraw_19651:HG3_Ill_250bpfermikitraw_20187:HG3_Ill_GATKHCSBGrefine_10276:HG3_Ill_GATKHC_24772:HG3_Ill_Krunchall_20738:HG3_Ill_scalpel_15026:HG3_Ill_svaba_19609:HG4_Ill_250bpfermikitraw_20441:HG4_Ill_GATKHCSBGrefine_10715:HG4_Ill_GATKHC_24808:HG4_Ill_Krunchall_21442:HG4_Ill_manta_3649:HG4_Ill_scalpel_14356:HG4_Ill_svaba_19416;NumExactMatchSVs=22;ClusterMaxShiftDist=0.290909;ClusterMaxSizeDiff=0.290909;ClusterMaxEditDist=0.290909;PBcalls=10;Illcalls=38;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=19;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=-60;DistBack=-13;DistForward=18076;DistMin=-13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=40;REFWIDENED=15:93747468-93747567;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1279.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:85:1/1:1:19:0:43:./.:7:20:4:19:1/1:1:44:./.:.:.:.:.:.
chr15	93897010	HG4_PB_SVrefine2PBcRDovetail_7772	TGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGTGGAGGCGGGCGGATCACGAGCTCGGGAGATCCAGACCATCCTGGCTAACAGGGCAAAACCCAGTCTCTACTAAAAAATACAAAAAAATTAGCCAGGCGTGGTGGCGGGCGCCTGTAGTTCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGATATTTACATTTTTAAATAGTAAAAAATAGATATCACTAAATATCACA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10829:HG2_PB_assemblyticsfalcon_9200:HG2_PB_SVrefine2Falcon1plusDovetail_3963:HG3_PB_SVrefine2Falcon1Dovetail_9481:HG3_PB_assemblyticsfalcon_9174:HG2_PB_PB10Xdip_11174:HG2_PB_PB10Xdip_11173:HG4_10X_allpass_2867:HG2_PB_SVrefine2PB10Xhap12_11312:HG2_10X_allpass_2456:HG4_Ill_GATKHCSBGrefine_10718:HG2_PB_pbsv_15650:HG2_PB_HySA_28508:HG4_PB_HySA_22777:HG2_Ill_tnscope_1707:HG4_PB_pbsv_15553:HG4_PB_SVrefine2PBcRDovetail_7772:HG2_PB_SVrefine2PBcRplusDovetail_3712:HG2_PB_SVrefine2PB10Xhap12_11311:HG2_Ill_SVrefine2DISCOVARplusDovetail_4408;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10829:HG4_PB_SVrefine2PBcRDovetail_7772:HG2_PB_SVrefine2PBcRplusDovetail_3712:HG2_PB_SVrefine2PB10Xhap12_11311:HG2_Ill_SVrefine2DISCOVARplusDovetail_4408;NumExactMatchSVs=5;ClusterMaxShiftDist=0.236496;ClusterMaxSizeDiff=0.236496;ClusterMaxEditDist=0.25731;PBcalls=14;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-362;DistBack=20199;DistForward=-77;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6423;REFWIDENED=15:93890874-93907257;PctSeqSimilarity=0.9375;PctSizeSimilarity=1;PctRecOverlap=0.7824;SizeDiff=0;StartDistance=-79;EndDistance=-79;GTMatch=0;TruScore=90;MatchId=1280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:26:0|1:22:1:3:21:./.:49:0:16:2:./.:29:3:./.:32:3:.:.:.
chr15	94933278	HG2_Ill_GATKHC_24944	CATATATATATATATATATATATATATATATATATATATATGTATATATATATATATATATATATGTAT	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7375:HG3_PB_HySA_23619:HG4_PB_pbsv_15558:HG3_PB_pbsv_15314:HG2_PB_pbsv_15654:HG4_PB_SVrefine2Falcon1Dovetail_9539:HG4_Ill_scalpel_14368:HG4_Ill_manta_3651:HG4_Ill_SVrefine2DISCOVARDovetail_11051:HG4_Ill_Krunchall_21464:HG4_Ill_GATKHC_24833:HG4_Ill_GATKHCSBGrefine_10722:HG4_Ill_250bpfermikitraw_20460:HG4_Ill_150bpfermikitraw_19712:HG4_10X_allpass_2868:HG3_Ill_manta_3503:HG3_Ill_SVrefine2DISCOVARDovetail_11253:HG3_Ill_Krunchall_20755:HG3_Ill_GATKHC_24791:HG3_Ill_GATKHCSBGrefine_10279:HG3_Ill_250bpfermikitraw_20203:HG3_Ill_150bpfermikitraw_19667:HG2_PB_assemblyticsfalcon_9209:HG2_Ill_scalpel_14767:HG2_Ill_manta_4297:HG2_Ill_SpiralSDKrefine_5762:HG2_Ill_SVrefine2DISCOVARplusDovetail_4414:HG2_Ill_Krunchall_21151:HG2_Ill_GATKHC_24944:HG2_Ill_GATKHCSBGrefine_10372:HG2_Ill_250bpfermikitraw_20798:HG2_Ill_150bpfermikitraw_19631:HG2_CG_vcfBeta_8825:HG2_10X_allpass_2457:HG2_10X_SVrefine210Xhap12_10831;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10831:HG2_10X_allpass_2457:HG2_CG_vcfBeta_8825:HG2_Ill_150bpfermikitraw_19631:HG2_Ill_250bpfermikitraw_20798:HG2_Ill_GATKHCSBGrefine_10372:HG2_Ill_GATKHC_24944:HG2_Ill_Krunchall_21151:HG2_Ill_SVrefine2DISCOVARplusDovetail_4414:HG2_Ill_SpiralSDKrefine_5762:HG2_Ill_manta_4297:HG2_Ill_scalpel_14767:HG2_PB_assemblyticsfalcon_9209:HG3_Ill_150bpfermikitraw_19667:HG3_Ill_250bpfermikitraw_20203:HG3_Ill_GATKHCSBGrefine_10279:HG3_Ill_GATKHC_24791:HG3_Ill_Krunchall_20755:HG3_Ill_SVrefine2DISCOVARDovetail_11253:HG3_Ill_manta_3503:HG4_10X_allpass_2868:HG4_Ill_150bpfermikitraw_19712:HG4_Ill_250bpfermikitraw_20460:HG4_Ill_GATKHCSBGrefine_10722:HG4_Ill_GATKHC_24833:HG4_Ill_Krunchall_21464:HG4_Ill_SVrefine2DISCOVARDovetail_11051:HG4_Ill_manta_3651:HG4_Ill_scalpel_14368;NumExactMatchSVs=29;ClusterMaxShiftDist=0.135338;ClusterMaxSizeDiff=0.135338;ClusterMaxEditDist=0.165414;PBcalls=7;Illcalls=24;TenXcalls=3;CGcalls=1;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=1;HG2count=14;HG3count=10;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-68;DistBack=28964;DistForward=-57;DistMin=-57;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=15:94933279-94933361;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:39:./.:11:30:33:4:1|0:0:27:28:0:0/1:36:35:./.:.:.:.:.:.
chr15	96662195	HG4_Ill_Cortex_1225	ATCCTGATTATCTGCTAGTTAACAATTTGGGCAGAGAAGGTATGTTAGTGTCT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_15566:HG4_PB_HySA_22807:HG4_Ill_svaba_19442:HG4_Ill_manta_3654:HG4_Ill_GATKHC_24851:HG4_Ill_GATKHCSBGrefine_10729:HG4_Ill_Cortex_1225:HG4_Ill_250bpfermikitraw_20471:HG4_Ill_150bpfermikitraw_19725:HG4_CG_vcfBeta_9894:HG2_PB_pbsv_15660:HG2_Ill_svaba_19477:HG2_Ill_manta_4300:HG2_Ill_breakscan11_2244:HG2_Ill_SpiralSDKrefine_5770:HG2_Ill_Krunchall_21161:HG2_Ill_GATKHC_24960:HG2_Ill_GATKHCSBGrefine_10377:HG2_Ill_Cortex_2985:HG2_Ill_250bpfermikitraw_20807:HG2_CG_vcfBeta_8833:HG4_Ill_Krunchall_21476;NumClusterSVs=22;ExactMatchIDs=HG2_CG_vcfBeta_8833:HG2_Ill_250bpfermikitraw_20807:HG2_Ill_Cortex_2985:HG2_Ill_GATKHCSBGrefine_10377:HG2_Ill_GATKHC_24960:HG2_Ill_Krunchall_21161:HG2_Ill_SpiralSDKrefine_5770:HG2_Ill_breakscan11_2244:HG2_Ill_manta_4300:HG2_Ill_svaba_19477:HG2_PB_pbsv_15660:HG4_CG_vcfBeta_9894:HG4_Ill_150bpfermikitraw_19725:HG4_Ill_250bpfermikitraw_20471:HG4_Ill_Cortex_1225:HG4_Ill_GATKHCSBGrefine_10729:HG4_Ill_GATKHC_24851:HG4_Ill_manta_3654:HG4_Ill_svaba_19442;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0754717;PBcalls=3;Illcalls=17;TenXcalls=0;CGcalls=2;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=2;HG2count=11;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=6489;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=15:96662194-96662248;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1282.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:27:./.:23:7:8:17:0|1:32:0:0:26:0/1:25:30:./.:.:.:.:.:.
chr15	97262975	HG2_Ill_GATKHC_24969	ATATATATATATATATATATGTGTATATATATATATATGTATATATATATATG	A	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_9067:HG3_PB_pbsv_15320:HG4_Ill_GATKHC_24859:HG4_Ill_GATKHCSBGrefine_10732:HG4_Ill_150bpfermikitraw_19733:HG2_Ill_GATKHC_24969:HG2_Ill_GATKHCSBGrefine_10379:HG2_Ill_150bpfermikitraw_19646:HG2_Ill_manta_4301:HG3_PB_assemblyticsfalcon_9202:HG3_Ill_GATKHC_24816:HG3_Ill_GATKHCSBGrefine_10286:HG3_Ill_150bpfermikitraw_19686;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19646:HG2_Ill_GATKHCSBGrefine_10379:HG2_Ill_GATKHC_24969:HG4_Ill_150bpfermikitraw_19733:HG4_Ill_GATKHCSBGrefine_10732:HG4_Ill_GATKHC_24859;NumExactMatchSVs=6;ClusterMaxShiftDist=0.107143;ClusterMaxSizeDiff=0.107143;ClusterMaxEditDist=0.125;PBcalls=3;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-52;DistBack=-23;DistForward=18168;DistMin=-23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=54;REFWIDENED=15:97262969-97263074;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1283.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:34:0|1:47:3:3:30:./.:10:2:1:6:0/1:11:9:./.:.:.:.:.:.
chr15	98226938	HG3_10X_allpass_3018	AAGAGAAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	A	20	PASS	ClusterIDs=HG4_PB_HySA_22821:HG3_PB_assemblyticsfalcon_9212:HG2_PB_assemblyticsfalcon_9234:HG2_PB_assemblyticsPBcR_8941:HG4_PB_assemblyticsfalcon_9078:HG4_PB_SVrefine2PBcRDovetail_7783:HG3_PB_pbsv_15330:HG2_PB_PB10Xdip_11193:HG2_Ill_Krunchall_21177:HG3_Ill_svaba_19656:HG3_Ill_SVrefine2DISCOVARDovetail_11269:HG3_Ill_GATKHCSBGrefine_10292:HG3_10X_allpass_3018:HG2_PB_SVrefine2PBcRplusDovetail_3722:HG2_PB_SVrefine2PB10Xhap12_11325:HG2_PB_SVrefine2Falcon1plusDovetail_3972:HG2_Ill_svaba_19496:HG2_Ill_SpiralSDKrefine_5779:HG2_Ill_SVrefine2DISCOVARplusDovetail_4427:HG2_Ill_MetaSV_1712:HG2_Ill_GATKHC_24982:HG2_Ill_GATKHCSBGrefine_10383:HG2_10X_SVrefine210Xhap12_10837:HG4_PB_SVrefine2Falcon1Dovetail_9549:HG3_PB_SVrefine2PBcRDovetail_7386:HG2_PB_pbsv_15670:HG4_Ill_SVrefine2DISCOVARDovetail_11064:HG4_Ill_MetaSV_1767:HG4_Ill_GATKHC_24871:HG4_Ill_GATKHCSBGrefine_10736:HG3_Ill_MetaSV_1821:HG4_PB_pbsv_15573:HG3_PB_SVrefine2Falcon1Dovetail_9493:HG2_PB_HySA_28553:HG2_Ill_Spiral_1035:HG4_Ill_Spiral_1222:HG3_PB_HySA_23646:HG3_Ill_Spiral_16170:HG2_PB_SVrefine2PB10Xhap12_11324;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10837:HG2_Ill_GATKHCSBGrefine_10383:HG2_Ill_GATKHC_24982:HG2_Ill_MetaSV_1712:HG2_Ill_SVrefine2DISCOVARplusDovetail_4427:HG2_Ill_SpiralSDKrefine_5779:HG2_Ill_svaba_19496:HG2_PB_SVrefine2Falcon1plusDovetail_3972:HG2_PB_SVrefine2PB10Xhap12_11325:HG2_PB_SVrefine2PBcRplusDovetail_3722:HG3_10X_allpass_3018:HG3_Ill_GATKHCSBGrefine_10292:HG3_Ill_SVrefine2DISCOVARDovetail_11269:HG3_Ill_svaba_19656;NumExactMatchSVs=14;ClusterMaxShiftDist=0.298507;ClusterMaxSizeDiff=0.298507;ClusterMaxEditDist=0.298507;PBcalls=19;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-152;DistBack=2339;DistForward=36683;DistMin=2339;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=15:98226939-98227091;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1284.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:41:0|1:29:0:4:40:1|0:0:19:20:0:0/1:9:12:./.:.:.:.:.:.
chr15	98598677	HG2_PB_SVrefine2Falcon2Bionano_7761	GTATATATACACGTGTATATATACACGTGTATATATATACATATATACACATATATATACACGTGTATATATACACATATATACATATATACACATATATACACACGTGTATATATACACATATATACATATATACACATATATACACACGTGTATATATACACATATATACATATATATACATATATACACACGTGTATATATACACATATATACACACGTGTATATATACACATATATACATATATACATATATATACACGTGTATATATACACATATATACATATATATACATATATACACGTGTATATATACACATATATATACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10839:HG2_PB_assemblyticsPBcR_8944:HG2_PB_HySA_28555:HG4_PB_HySA_22825:HG2_PB_pbsv_15672:HG4_PB_pbsv_15576:HG3_PB_HySA_23648:HG3_Ill_MetaSV_1822:HG2_Ill_MetaSV_1714:HG3_Ill_manta_3508:HG3_Ill_GATKHCSBGrefine_10293:HG3_10X_allpass_3019:HG2_Ill_GATKHCSBGrefine_10385:HG2_10X_allpass_2458:HG3_PB_pbsv_15331:HG2_PB_SVrefine2PBcRplusDovetail_3724:HG4_Ill_MetaSV_1769:HG4_Ill_manta_3657:HG2_Ill_manta_4303:HG4_PB_SVrefine2Falcon1Dovetail_9551:HG4_PB_SVrefine2PBcRDovetail_7784:HG2_10X_SVrefine210Xhap12_10840:HG3_Ill_Krunchall_20785:HG4_Ill_Krunchall_21499:HG2_Ill_tnscope_1708:HG3_PB_SVrefine2PBcRDovetail_7387:HG3_PB_SVrefine2Falcon1Dovetail_9494:HG3_Ill_SVrefine2DISCOVARDovetail_11271:HG2_PB_SVrefine2PBcRplusDovetail_3723:HG2_PB_SVrefine2PB10Xhap12_11327:HG2_PB_SVrefine2Falcon2Bionano_7761:HG2_PB_SVrefine2Falcon1plusDovetail_3973:HG2_Ill_SVrefine2DISCOVARplusDovetail_4429;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10839:HG3_PB_SVrefine2PBcRDovetail_7387:HG3_PB_SVrefine2Falcon1Dovetail_9494:HG3_Ill_SVrefine2DISCOVARDovetail_11271:HG2_PB_SVrefine2PBcRplusDovetail_3723:HG2_PB_SVrefine2PB10Xhap12_11327:HG2_PB_SVrefine2Falcon2Bionano_7761:HG2_PB_SVrefine2Falcon1plusDovetail_3973:HG2_Ill_SVrefine2DISCOVARplusDovetail_4429;NumExactMatchSVs=9;ClusterMaxShiftDist=0.103976;ClusterMaxSizeDiff=0.103976;ClusterMaxEditDist=0.103976;PBcalls=16;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=26;DistForward=-288;DistMin=-288;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=15:98598678-98599051;PctSeqSimilarity=0.9247;PctSizeSimilarity=0.9695;PctRecOverlap=0.9149;SizeDiff=10;StartDistance=-28;EndDistance=-18;GTMatch=0;TruScore=93;MatchId=1285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:86:1/1:3:41:1:26:./.:5:27:3:16:1/1:2:26:0/1:11:8:.:.:.
chr15	98706089	HG2_Ill_MetaSV_1717	TGAGTCCAGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10842:HG2_10X_allpass_2459:HG2_PB_assemblyticsPBcR_8946:HG4_Ill_Krunchall_21501:HG4_PB_pbsv_15578:HG4_PB_HySA_22826:HG4_Ill_MetaSV_1772:HG4_PB_assemblyticsfalcon_9083:HG4_PB_SVrefine2Falcon1Dovetail_9553:HG4_Ill_scalpel_14387:HG4_Ill_GATKHCSBGrefine_10738:HG4_10X_allpass_2869:HG3_PB_assemblyticsfalcon_9214:HG3_PB_SVrefine2Falcon1Dovetail_9495:HG2_PB_pbsv_15674:HG2_Ill_scalpel_14784:HG2_Ill_manta_4304:HG2_Ill_SpiralSDKrefine_5782:HG2_Ill_MetaSV_1717:HG2_Ill_GATKHCSBGrefine_10386:HG2_Ill_breakscan11_2245:HG4_PB_SVrefine2PBcRDovetail_7785:HG4_Ill_SVrefine2DISCOVARDovetail_11066:HG2_PB_SVrefine2PBcRplusDovetail_3725:HG2_PB_SVrefine2PB10Xhap12_11330:HG2_PB_SVrefine2Falcon1plusDovetail_3975;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10386:HG2_Ill_MetaSV_1717:HG2_Ill_SpiralSDKrefine_5782:HG2_Ill_manta_4304:HG2_Ill_scalpel_14784:HG2_PB_pbsv_15674:HG3_PB_SVrefine2Falcon1Dovetail_9495:HG3_PB_assemblyticsfalcon_9214:HG4_10X_allpass_2869:HG4_Ill_GATKHCSBGrefine_10738:HG4_Ill_scalpel_14387:HG4_PB_SVrefine2Falcon1Dovetail_9553:HG4_PB_assemblyticsfalcon_9083;NumExactMatchSVs=13;ClusterMaxShiftDist=0.248276;ClusterMaxSizeDiff=0.248276;ClusterMaxEditDist=0.248276;PBcalls=12;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-77;DistForward=-82;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=15:98706086-98706432;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1286.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:35:0|1:40:0:0:32:0|1:48:0:0:22:0/1:28:17:0/1:19:10:.:.:.
chr15	98817016	HG3_Ill_scalpel_15051	AGTGGAAAGGAACAAGGAGACCCAGCACGCTCGGAGTCACATTCCGGCCTACCACCTTCAGATACAGGCTGTTATGGTCCTCTCTGTATCTGAATTTGTTTTCTTTTTTTTTTTTAATGTATTTATTTGTTTTATTTTAGATTCAAGGGATACACAGGTAGGTTTGTTACATGGATATATTGCATGATGCTGAGGTTTGGGCTTCTATTAAACTCATCATCCAAATTGTGAACATAGTCCCCAATAGGTGGTTTTTCAATCCCCACCTCCCTTTCTTCCCCCTTTTGAAGATCCCAGTGTCTATTGTTCCCATCTTTATGTCCATGTGTACCCGATGCTTAGCTCCCACTTGCAAGTGAGAACATGCAATATTTGGTTCTCTGTGTCCATGTTAACTCACTTAGGGTAGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10843:HG3_PB_pbsv_15332:HG3_Ill_Krunchall_20787:HG2_PB_pbsv_15675:HG2_Ill_Krunchall_21181:HG3_PB_HySA_23650:HG3_Ill_MetaSV_1825:HG2_Ill_tnscope_1709:HG4_PB_assemblyticsfalcon_9084:HG3_PB_SVrefine2PBcRDovetail_7388:HG3_Ill_scalpel_15051:HG3_Ill_manta_3509:HG3_Ill_SVrefine2DISCOVARDovetail_11273:HG3_Ill_GATKHCSBGrefine_10295:HG3_10X_allpass_3020:HG2_PB_assemblyticsfalcon_9237:HG2_PB_SVrefine2PB10Xhap12_11331:HG2_PB_SVrefine2Falcon1plusDovetail_3976:HG2_Ill_manta_4305:HG2_Ill_MetaSV_1718:HG2_Ill_GATKHCSBGrefine_10388:HG2_10X_allpass_2460;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10843:HG3_PB_SVrefine2PBcRDovetail_7388:HG3_Ill_scalpel_15051:HG3_Ill_manta_3509:HG3_Ill_SVrefine2DISCOVARDovetail_11273:HG3_Ill_GATKHCSBGrefine_10295:HG3_10X_allpass_3020:HG2_PB_assemblyticsfalcon_9237:HG2_PB_SVrefine2PB10Xhap12_11331:HG2_PB_SVrefine2Falcon1plusDovetail_3976:HG2_Ill_manta_4305:HG2_Ill_MetaSV_1718:HG2_Ill_GATKHCSBGrefine_10388:HG2_10X_allpass_2460;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00487805;ClusterMaxSizeDiff=0.00487805;ClusterMaxEditDist=0.00488401;PBcalls=8;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-409;DistBack=-409;DistForward=-408;DistMin=-409;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=15:98817017-98817426;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1287.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:38:./.:18:16:16:11:1|0:0:18:50:0:0/1:67:18:0/1:40:13:.:.:.
chr15	98842325	HG4_PB_SVrefine2Falcon1Dovetail_9554	AATCTCTTCCTACATTTCTATATCTATAAGTATACATATAGATATATTCTATTGGTGTTTCCTGGAGAACCCTAATACAGTAACATTCACTCTATCTGAGCCATTCTCTGTTACACAAAAGCTGTAAGTAATGAGAAATCAGTCTTGAATATCAGCAAGAGCTCGAGTAAAACCTGCTACTCGCTGCCAACTATGTACCTCTCTGAGCTCCCCTTTTTTCTCAATTACAAAATAAGACTGCTGTATCCTGAAAGGAACGTGTGCAGATTAACTGAAAGCCTGCATTCCATCTATTTTGCTACACCCACATGGCTACACTGGCTTCCAACCTAGTCAGGGGCTCTGTTGTAAATTAGAAGGGACAACATGCCCCACGCCCTGCCAGTCTGGACCTAGCATCATCAGGTTCGCTACTGCAGCAGGAGTCATAAGCCCATGGCCCAAAGAATGTGCTATGTTTGGCTGAGACAGTATTGTTCTGTTTTTAAATTAATCAACAGCATTTTATAAATGAAAGGTGTTGCACGAACACGCCACTCTGCAGAATCTCCTAGAAAATCAGCCCCTCTGGTGACAGCAGCCTCGATTCCCACCCAGAGGGCTCCAGCCGGAGCTGCGGGGAGGCACATCCCTCAAACAGGGTGTGCCCATTTGGCTTCCCTTCTCCTCCTGTGCCCACCAAATCTGAGGGCGGCTCCTGTGGATGTTCATATTTGCTACCCCGGCTGAGTACCTCTCCAGGACAGCATTCATCGCCCCAGCCTGAATCCCTCTGTCCCTCACTCAGGTGCCCGCTCTCTGCTGGCAAGCCTTCAGAGCACCCCCAACCCCTGCACCCACCTCCAGCCCATCCCACAGTTGTCACTAACTCTGAGAAAGAACACTGTGGTCTACCACAGGGCATAGAGTCACCCTATGGTCCGAATGGCATCGCAGTGGATTCCAATTGAAGGGGAGGGAGGGAGAAAGAAAAGGCCAGAGAGTGCTGAGGCTCCAGCACCACCAGCTTCTCCACTTGGGCCAGGCCCTGCTCACTTTCACTTGCATGGTGTCCTGTTTCCATACACTGGATACAGTCCTGATGGCCTTGCTCCCACCAAGGAGCCCTCTAGTTCTGAAGTCACCAGGCTCTGGTGGGTACGAGATCCTGTCCCCTTGTCCAGATCCCTCTCCTTCCTCTGCTTTCACTTGGCTGCTCCAAGGTGGCCCTGAGTCCTGCTTATTCCCCAGTCCCCACCCCTTTGCTGACGGCCCTTCCCGAGTACCCAGAATCTCTGCACACTCCCGCCCTCCCTGATGGATTCCCTTGCATCCACTTTGCTCTGGGCCACTCTGCACAGGGAGGAGTGTTCTGGAGAATCCAGCGGTCCTGGAAGCCTGCTCACCTCCCCGCGCCCCGCTCCACTGTCCCCTCCCAAGGCACACTCTCTCACCTCTCTCAGTAGAGTCTACCCCCTAGAAAACTTTTTAAATGTCTCCAGAA	CC	20	PASS	ClusterIDs=HG4_Ill_Krunchall_21503:HG3_PB_assemblyticsfalcon_9216:HG3_10X_allpass_3021:HG3_PB_SVrefine2Falcon1Dovetail_9496:HG4_Ill_GATKHCSBGrefine_10740:HG3_PB_pbsv_15333:HG2_PB_pbsv_15676:HG2_PB_assemblyticsfalcon_9238:HG2_PB_SVrefine2Falcon1plusDovetail_3977:HG2_10X_allpass_2461:HG2_Ill_tnscope_1710:HG2_Ill_SpiralSDKrefine_5785:HG4_PB_SVrefine2PBcRDovetail_7786:HG4_PB_SVrefine2Falcon1Dovetail_9554:HG4_Ill_SVrefine2DISCOVARDovetail_11067:HG3_PB_SVrefine2PBcRDovetail_7389:HG2_PB_SVrefine2PB10Xhap12_11332:HG2_PB_SVrefine2Falcon2Bionano_7762:HG2_PB_PB10Xdip_11202:HG2_Ill_SVrefine2DISCOVARplusDovetail_4430:HG2_10X_SVrefine210Xhap12_10844:HG4_Ill_MetaSV_1773:HG2_Ill_MetaSV_1719:HG4_PB_assemblyticsfalcon_9085:HG4_10X_allpass_2870:HG3_Ill_MetaSV_1826:HG4_PB_pbsv_15580;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10844:HG2_Ill_SVrefine2DISCOVARplusDovetail_4430:HG2_PB_PB10Xdip_11202:HG2_PB_SVrefine2Falcon2Bionano_7762:HG2_PB_SVrefine2PB10Xhap12_11332:HG3_PB_SVrefine2PBcRDovetail_7389:HG4_Ill_SVrefine2DISCOVARDovetail_11067:HG4_PB_SVrefine2Falcon1Dovetail_9554:HG4_PB_SVrefine2PBcRDovetail_7786;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0142421;ClusterMaxSizeDiff=0.0142421;ClusterMaxEditDist=0.0142421;PBcalls=14;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1481;DistBack=-1483;DistForward=18103;DistMin=-1483;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=15:98842325-98843807;PctSeqSimilarity=0.9811;PctSizeSimilarity=0.9987;PctRecOverlap=0.9987;SizeDiff=-2;StartDistance=2;EndDistance=1;GTMatch=0;TruScore=99;MatchId=1288.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:39:0|1:26:1:0:25:1|0:0:22:32:0:0/1:57:27:0/1:156:53:1502:.:.
chr15	99574407	HG4_PB_SVrefine2Falcon1Dovetail_9558	ATTTATTTATTTATTTTTTTGAGACAGAGTCTCACTCTTGTCACCCAAGCTGGAGTGCAGTGGCATGATCTCAGCCCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTCCCTCAGCCTCCTGAGGAGCTGGGATTACAGGCTCCGGACATCACGCCCAATTAATTTGTGTATTTTTCTAGGAGAGATGGCTTGTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCGCAAAGTGCTGGGATTGCAGGCGTGAGCTACCACGCCCGGCCCAAGATGTAAATTATTTACTATTTGGCCTTTTACGGAAAAAGTTCACCAGCACCTGTTCTTTTGGAAATAGTTATTTCAGAGAAGGTTTGCTCATGTGGAGTTAGTGTGGTGATGGCCAGATGGAGTAGAGAAAGAAAAAGTCACAAGATAATGGGAAGGAAGGCACAGTATTAGAGTATGTGCGGAGGAAATTGAGGCCTTCAATTAGGAGGTGAACAGGGAGAAGAGAGGGCTACGTGGGTTGTGATTCCATTCTCTAATAAGCAGTCTATGTGGAGTAAAAGTCTAAATGGAAATGCTCAGGTACAAAGGGAAATTACCATGTAGGTTTTCATAGAGGTATTAAACATTTTATCAGCTCATGGGATCTCTGACTCACAAATAAATCACGTCAAAATCAGAACTACAGTAGAGCAAAACATTTCTTTGGAAGCTCAACCGTGGAAGGGAAGGGTCCTGACCTCCTCTTGCAGTTGGGTTCTCTGGCTTTTAAAGCTTTGTCTGAAGGCCATCACCCACATTTGCACTGTTGCTGCAAACCGAGAGAAAAGAAGCATGGAGAATTTTTCTCCTGCCACAGGGATCTATTGCTCAATAGAGTTTATGACATTAGGCCTGTGCCTACCTGTTTAATAATTCTGAGTCTGGGTTCAGTAGCCCAGTGGGTTATAAGGAAGGTACTGGCTGTGGATTTTACTGGAGATGGGGATCTTTCAATCCCAAAGGTAGGGCTGTGAGATTGCTCTGAGTAGACACTAAATTATTAGACTATTAATACAATAATAGCTCATTAGCCCAGATAGCCCAATGTCTGGGCCTTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10849:HG3_Ill_Krunchall_20801:HG2_Ill_Krunchall_21191:HG2_10X_allpass_2462:HG3_PB_HySA_23659:HG4_PB_HySA_22832:HG4_Ill_GATKHCSBGrefine_10749:HG3_Ill_GATKHCSBGrefine_10305:HG2_Ill_GATKHCSBGrefine_10393:HG2_PB_PB10Xdip_11207:HG2_PB_PB10Xdip_11206:HG2_PB_pbsv_15683:HG4_PB_pbsv_15588:HG3_PB_pbsv_15340:HG4_Ill_MetaSV_1777:HG4_10X_allpass_2872:HG3_Ill_MetaSV_1828:HG3_10X_allpass_3023:HG2_Ill_MetaSV_1722:HG2_Ill_tnscope_1711:HG4_PB_SVrefine2PBcRDovetail_7789:HG4_PB_SVrefine2Falcon1Dovetail_9558:HG4_Ill_SVrefine2DISCOVARDovetail_11073:HG3_PB_SVrefine2PBcRDovetail_7391:HG3_PB_SVrefine2Falcon1Dovetail_9500:HG3_Ill_SVrefine2DISCOVARDovetail_11278:HG2_PB_SVrefine2PBcRplusDovetail_3728:HG2_PB_SVrefine2PB10Xhap12_11335:HG2_PB_SVrefine2Falcon2Bionano_7765:HG2_PB_SVrefine2Falcon1plusDovetail_3980:HG2_Ill_SVrefine2DISCOVARplusDovetail_4436;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10849:HG4_PB_SVrefine2PBcRDovetail_7789:HG4_PB_SVrefine2Falcon1Dovetail_9558:HG4_Ill_SVrefine2DISCOVARDovetail_11073:HG3_PB_SVrefine2PBcRDovetail_7391:HG3_PB_SVrefine2Falcon1Dovetail_9500:HG3_Ill_SVrefine2DISCOVARDovetail_11278:HG2_PB_SVrefine2PBcRplusDovetail_3728:HG2_PB_SVrefine2PB10Xhap12_11335:HG2_PB_SVrefine2Falcon2Bionano_7765:HG2_PB_SVrefine2Falcon1plusDovetail_3980:HG2_Ill_SVrefine2DISCOVARplusDovetail_4436;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0686499;ClusterMaxSizeDiff=0.0686499;ClusterMaxEditDist=0.0733272;PBcalls=15;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1126;DistBack=20429;DistForward=-827;DistMin=-827;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=300;REFWIDENED=15:99574408-99575833;PctSeqSimilarity=0.8947;PctSizeSimilarity=1;PctRecOverlap=0.9335;SizeDiff=0;StartDistance=-75;EndDistance=-75;GTMatch=0;TruScore=94;MatchId=1289.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:5:106:1/1:0:10:0:9:./.:8:1:10:2:0/1:17:18:0/1:11:50:1160:3008:.
chr15	100466610	HG2_PB_SVrefine2Falcon1plusDovetail_3986	CCGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGAGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGAGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGAGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGAGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGAGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGAGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11341:HG3_PB_pbsv_15351:HG3_PB_pbsv_15350:HG3_PB_SVrefine2PBcRDovetail_7400:HG3_PB_SVrefine2Falcon1Dovetail_9508:HG2_PB_SVrefine2PBcRplusDovetail_3734:HG2_PB_SVrefine2Falcon2Bionano_7771:HG2_PB_SVrefine2Falcon1plusDovetail_3986;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3986:HG2_PB_SVrefine2Falcon2Bionano_7771:HG3_PB_SVrefine2Falcon1Dovetail_9508;NumExactMatchSVs=3;ClusterMaxShiftDist=0.28917;ClusterMaxSizeDiff=0.28917;ClusterMaxEditDist=0.28917;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-947;DistBack=13903;DistForward=-930;DistMin=-930;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1124;REFWIDENED=15:100466611-100468681;PctSeqSimilarity=0.9684;PctSizeSimilarity=0.9989;PctRecOverlap=0.3502;SizeDiff=1;StartDistance=-616;EndDistance=-615;GTMatch=0;TruScore=77;MatchId=1290.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:1|0:4:22:27:3:0/0:8:0:5:0:0/0:15:0:0/1:15:20:.:.:.
chr15	100606852	HG3_PB_SVrefine2PBcRDovetail_7403	GTCCTTTAACACTTGAAATACATTTTTCCACTGTCTTCCCTTATGATACAGAGAAGGCAACCATCCTTCTACGTGTCGTTCCTTTCTAAGTGGCCCATCTGTCTCAGCAGTATTCCTTCAACACTTGAAATACACTTTTCCGCTGTCTTCCCTTATGATATTGAGAGGGCAGCCATCATTCTAAGTGTCCTTCCTTTCTGTCTCAGCAATAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10858:HG2_Ill_SpiralSDKrefine_5794:HG2_PB_pbsv_15692:HG4_PB_pbsv_15600:HG4_Ill_GATKHCSBGrefine_10753:HG4_Ill_250bpfermikitraw_20517:HG3_PB_pbsv_15354:HG4_Ill_SVrefine2DISCOVARDovetail_11080:HG3_PB_SVrefine2PBcRDovetail_7403:HG3_PB_SVrefine2Falcon1Dovetail_9511:HG2_PB_SVrefine2PB10Xhap12_11346:HG2_PB_SVrefine2Falcon1plusDovetail_3989;NumClusterSVs=12;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10858:HG4_Ill_SVrefine2DISCOVARDovetail_11080:HG3_PB_SVrefine2PBcRDovetail_7403:HG3_PB_SVrefine2Falcon1Dovetail_9511:HG2_PB_SVrefine2PB10Xhap12_11346:HG2_PB_SVrefine2Falcon1plusDovetail_3989;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0733496;ClusterMaxSizeDiff=0.0733496;ClusterMaxEditDist=0.132029;PBcalls=7;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-211;DistBack=8254;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=251;REFWIDENED=15:100606853-100607314;PctSeqSimilarity=0.8927;PctSizeSimilarity=0.9384;PctRecOverlap=0.4245;SizeDiff=13;StartDistance=-122;EndDistance=-109;GTMatch=0;TruScore=75;MatchId=1291.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:29:0|1:42:3:2:25:0/0:28:0:43:1:0/0:61:0:./.:.:.:2684:.:.
chr15	100702638	HG3_PB_SVrefine2PBcRDovetail_7405	TATATACACATATAGTTATATATATGCACATATACACATTATATGTGTATATATATGCAC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3991:HG3_PB_assemblyticsfalcon_9242:HG4_PB_assemblyticsfalcon_9114:HG2_PB_pbsv_15695:HG4_PB_pbsv_15603:HG3_PB_pbsv_15356:HG3_PB_SVrefine2PBcRDovetail_7405:HG2_PB_SVrefine2PBcRplusDovetail_3739:HG2_PB_SVrefine2PB10Xhap12_11350;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3991:HG3_PB_SVrefine2PBcRDovetail_7405:HG2_PB_SVrefine2PBcRplusDovetail_3739:HG2_PB_SVrefine2PB10Xhap12_11350;NumExactMatchSVs=4;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.096;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-59;DistBack=-1;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=15:100702637-100702708;PctSeqSimilarity=0.9778;PctSizeSimilarity=0.9516;PctRecOverlap=0.7143;SizeDiff=-3;StartDistance=-15;EndDistance=-18;GTMatch=1;TruScore=88;MatchId=1292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:19:51:./.:12:23:3:24:./.:21:7:28:2:0/0:50:0:./.:.:.:.:.:.
chr15	101008051	HG4_Ill_svaba_19490	TATATATAGATAGATAGATAGATAGATAGATAGATATAGATATAGATATAG	T	20	PASS	ClusterIDs=HG2_10X_allpass_2464:HG4_Ill_scalpel_14408:HG4_Ill_Krunchall_21539:HG4_Ill_GATKHC_24909:HG4_Ill_GATKHCSBGrefine_10757:HG2_Ill_scalpel_14804:HG2_Ill_Krunchall_21205:HG2_Ill_GATKHC_25006:HG2_Ill_GATKHCSBGrefine_10398:HG4_Ill_svaba_19490:HG4_Ill_250bpfermikitraw_20528:HG4_10X_allpass_2875:HG2_PB_assemblyticsfalcon_9272:HG2_PB_assemblyticsPBcR_8975:HG2_Ill_svaba_19520:HG2_Ill_250bpfermikitraw_20855:HG2_Ill_150bpfermikitraw_19677;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_2464:HG4_Ill_svaba_19490:HG4_Ill_250bpfermikitraw_20528:HG4_10X_allpass_2875:HG2_PB_assemblyticsfalcon_9272:HG2_PB_assemblyticsPBcR_8975:HG2_Ill_svaba_19520:HG2_Ill_250bpfermikitraw_20855:HG2_Ill_150bpfermikitraw_19677;NumExactMatchSVs=9;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.125;PBcalls=2;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=-34;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=15:101008050-101008108;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1293.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:28:0|1:33:0:3:27:0|1:11:1:0:13:0/1:31:11:./.:.:.:.:.:.
chr15	101453067	HG4_Ill_scalpel_14415	TAAAATACAGATGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGCAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1036:HG4_Ill_Krunchall_21545:HG2_Ill_Krunchall_21211:HG4_PB_pbsv_15621:HG4_PB_HySA_22872:HG4_Ill_MetaSV_1782:HG2_Ill_tnscope_1712:HG2_Ill_MetaSV_1728:HG4_PB_SVrefine2PBcRDovetail_7797:HG4_Ill_scalpel_14415:HG4_Ill_manta_3664:HG4_Ill_SVrefine2DISCOVARDovetail_11093:HG4_Ill_GATKHCSBGrefine_10769:HG4_10X_allpass_2878:HG3_PB_SVrefine2Falcon1Dovetail_9527:HG2_PB_pbsv_15711:HG2_PB_SVrefine2PB10Xhap12_11362:HG2_PB_SVrefine2Falcon1plusDovetail_4006:HG2_Ill_breakscan11_2252:HG2_Ill_SVrefine2DISCOVARplusDovetail_4450:HG2_Ill_GATKHCSBGrefine_10407:HG2_10X_SVrefine210Xhap12_10873:HG4_Ill_Spiral_1226;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10873:HG2_Ill_GATKHCSBGrefine_10407:HG2_Ill_SVrefine2DISCOVARplusDovetail_4450:HG2_Ill_breakscan11_2252:HG2_PB_SVrefine2Falcon1plusDovetail_4006:HG2_PB_SVrefine2PB10Xhap12_11362:HG2_PB_pbsv_15711:HG3_PB_SVrefine2Falcon1Dovetail_9527:HG4_10X_allpass_2878:HG4_Ill_GATKHCSBGrefine_10769:HG4_Ill_SVrefine2DISCOVARDovetail_11093:HG4_Ill_manta_3664:HG4_Ill_scalpel_14415:HG4_PB_SVrefine2PBcRDovetail_7797;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00966184;ClusterMaxSizeDiff=0.00966184;ClusterMaxEditDist=0.00966184;PBcalls=7;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-309;DistBack=-328;DistForward=-298;DistMin=-328;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=15:101453068-101453390;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1294.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:34:0|1:33:0:1:27:0|1:47:0:0:19:0/1:44:24:0/1:25:8:.:.:.
chr15	101641129	HG3_Ill_scalpel_15074	TGACACAGGCTCCAGGGCAATGGTGACCCTCACGGCCTCACCTCACCAGGGAAGCTGTCA	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_20866:HG4_PB_HySA_22877:HG2_PB_HySA_28613:HG4_PB_assemblyticsfalcon_9140:HG3_PB_pbsv_15384:HG4_PB_pbsv_15624:HG2_PB_pbsv_15716:HG3_PB_HySA_23719:HG4_PB_SVrefine2PBcRDovetail_7800:HG4_Ill_svaba_19502:HG4_Ill_manta_3665:HG4_Ill_Krunchall_21550:HG4_Ill_250bpfermikitraw_20542:HG3_PB_SVrefine2PBcRDovetail_7416:HG3_PB_SVrefine2Falcon1Dovetail_9530:HG3_Ill_svaba_19687:HG3_Ill_scalpel_15074:HG3_Ill_Krunchall_20822:HG3_Ill_GATKHCSBGrefine_10322:HG3_Ill_250bpfermikitraw_20272:HG3_Ill_150bpfermikitraw_19731:HG2_PB_SVrefine2PBcRplusDovetail_3751:HG2_PB_SVrefine2PB10Xhap12_11364:HG2_PB_SVrefine2Falcon1plusDovetail_4009:HG2_Ill_svaba_19532:HG2_Ill_manta_4310:HG2_Ill_SpiralSDKrefine_5807:HG2_Ill_SVrefine2DISCOVARplusDovetail_4451;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20866:HG4_PB_SVrefine2PBcRDovetail_7800:HG4_Ill_svaba_19502:HG4_Ill_manta_3665:HG4_Ill_Krunchall_21550:HG4_Ill_250bpfermikitraw_20542:HG3_PB_SVrefine2PBcRDovetail_7416:HG3_PB_SVrefine2Falcon1Dovetail_9530:HG3_Ill_svaba_19687:HG3_Ill_scalpel_15074:HG3_Ill_Krunchall_20822:HG3_Ill_GATKHCSBGrefine_10322:HG3_Ill_250bpfermikitraw_20272:HG3_Ill_150bpfermikitraw_19731:HG2_PB_SVrefine2PBcRplusDovetail_3751:HG2_PB_SVrefine2PB10Xhap12_11364:HG2_PB_SVrefine2Falcon1plusDovetail_4009:HG2_Ill_svaba_19532:HG2_Ill_manta_4310:HG2_Ill_SpiralSDKrefine_5807:HG2_Ill_SVrefine2DISCOVARplusDovetail_4451;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.0512821;PBcalls=13;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=2246;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=76;REFWIDENED=15:101641130-101641264;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1295.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:33:0|1:20:2:1:29:./.:0:4:13:0:0/1:22:18:./.:.:.:.:.:.
chr15	101901540	HG2_Ill_Krunchall_21216	CTCCCACTAAATGTGGAATCAGAATCTCAGCAAATTTTTATTCCTCCCCATTCTCAT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_9299:HG3_PB_HySA_23727:HG3_Ill_GATKHC_24876:HG3_Ill_GATKHCSBGrefine_10324:HG2_Ill_GATKHC_25027:HG2_Ill_GATKHCSBGrefine_10410:HG2_Ill_breakscan11_2253:HG2_Ill_SpiralSDKrefine_5811:HG3_Ill_manta_3514:HG3_Ill_Cortex_1287:HG3_CG_vcfBeta_8438:HG2_Ill_Cortex_3012:HG2_CG_vcfBeta_8861:HG3_Ill_Spiral_16198:HG2_Ill_Spiral_1037:HG3_Ill_svaba_19689:HG3_Ill_scalpel_15075:HG3_Ill_Krunchall_20825:HG3_Ill_250bpfermikitraw_20276:HG3_Ill_150bpfermikitraw_19734:HG3_10X_allpass_3028:HG2_PB_pbsv_15720:HG2_Ill_svaba_19535:HG2_Ill_scalpel_14813:HG2_Ill_Krunchall_21216:HG2_Ill_250bpfermikitraw_20870:HG2_Ill_150bpfermikitraw_19689:HG2_10X_allpass_2465:HG3_PB_pbsv_15388:HG2_PB_assemblyticsPBcR_8996;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_2465:HG2_Ill_150bpfermikitraw_19689:HG2_Ill_250bpfermikitraw_20870:HG2_Ill_Krunchall_21216:HG2_Ill_scalpel_14813:HG2_Ill_svaba_19535:HG2_PB_pbsv_15720:HG3_10X_allpass_3028:HG3_Ill_150bpfermikitraw_19734:HG3_Ill_250bpfermikitraw_20276:HG3_Ill_Krunchall_20825:HG3_Ill_scalpel_15075:HG3_Ill_svaba_19689;NumExactMatchSVs=13;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.149533;PBcalls=5;Illcalls=21;TenXcalls=2;CGcalls=2;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=14;HG4count=0;NumTechs=4;NumTechsExact=3;SVLEN=-56;DistBack=624;DistForward=26313;DistMin=624;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=15:101901539-101901597;PctSeqSimilarity=0.9913;PctSizeSimilarity=0.9825;PctRecOverlap=0.9828;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:21:0|1:17:0:4:20:1|0:0:22:34:1:0/1:31:11:./.:.:.:.:.:.
chr16	502435	HG2_PB_SVrefine2PBcRplusDovetail_3770	ATTATTATTATTATTTTTGAGACAGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCGGTGGCATGATCTCGGCTCACTGCAAGCTCCGCCTCCCCTGTTCACGCCATTCTCCTGCCTCAGCATCCCGAGTAGTTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCTATTTCTTTATTTTTTAATTTTTTT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4030:HG3_PB_pbsv_15417:HG2_PB_pbsv_15753:HG4_PB_pbsv_15659:HG4_PB_SVrefine2PBcRDovetail_7816:HG4_PB_SVrefine2Falcon1Dovetail_9582:HG4_Ill_SVrefine2DISCOVARDovetail_11104:HG3_PB_SVrefine2PBcRDovetail_7430:HG3_PB_SVrefine2Falcon1Dovetail_9554:HG3_Ill_SVrefine2DISCOVARDovetail_11288:HG2_PB_SVrefine2PBcRplusDovetail_3770:HG2_PB_SVrefine2PB10Xhap12_11383;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11383:HG2_PB_SVrefine2PBcRplusDovetail_3770:HG3_Ill_SVrefine2DISCOVARDovetail_11288:HG3_PB_SVrefine2Falcon1Dovetail_9554:HG3_PB_SVrefine2PBcRDovetail_7430:HG4_Ill_SVrefine2DISCOVARDovetail_11104:HG4_PB_SVrefine2Falcon1Dovetail_9582:HG4_PB_SVrefine2PBcRDovetail_7816;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0405616;ClusterMaxSizeDiff=0.0405616;ClusterMaxEditDist=0.0842434;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-323;DistBack=2091;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=616;REFWIDENED=16:502436-503374;PctSeqSimilarity=0.9224;PctSizeSimilarity=0.9907;PctRecOverlap=0.6605;SizeDiff=3;StartDistance=-110;EndDistance=-107;GTMatch=0;TruScore=85;MatchId=1298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:27:0|1:21:3:3:23:./.:12:1:12:0:0/0:70:0:0/0:23:1:.:.:.
chr16	661595	HG3_PB_SVrefine2Falcon1Dovetail_9575	CGGGACAGCCGCCCTGGCCTGTAGAATCAAGAGCAGGGACAGCCGCCCTGGCCTGTAGAATCAAGAGCAGAGACAGCCGCCCTGGCCTGTAGAATCAAGAGCAGGGACAGCCGCCCTGGCCTGTAGAATCAAGAGCAGGGACAGCCGCCCTGGCCTGTAGATTCAAGAGCAGGGACAGCCGCCCTGGCCTGTAGAATCAAGAGCAAGGGACAGCCGCCTTCGCCTGTAGAATCAAGAGCA	C	10	PASS	ClusterIDs=HG3_PB_pbsv_15436:HG2_PB_pbsv_15777:HG4_PB_SVrefine2Falcon1Dovetail_9600:HG4_PB_assemblyticsfalcon_9187:HG4_PB_pbsv_15682:HG3_PB_SVrefine2Falcon1Dovetail_9575:HG2_PB_pbsv_15776:HG2_PB_SVrefine2PBcRplusDovetail_3786:HG2_PB_SVrefine2PB10Xhap12_11395:HG2_PB_SVrefine2Falcon2Bionano_7811:HG2_PB_SVrefine2Falcon1plusDovetail_4040;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4040:HG2_PB_SVrefine2Falcon2Bionano_7811:HG2_PB_SVrefine2PB10Xhap12_11395:HG2_PB_SVrefine2PBcRplusDovetail_3786:HG2_PB_pbsv_15776:HG3_PB_SVrefine2Falcon1Dovetail_9575:HG4_PB_pbsv_15682;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0165975;ClusterMaxSizeDiff=0.0124224;ClusterMaxEditDist=0.140496;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-239;DistBack=-306;DistForward=-239;DistMin=-306;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1612;REFWIDENED=16:661596-663446;PctSeqSimilarity=0.9787;PctSizeSimilarity=0.9835;PctRecOverlap=0.2254;SizeDiff=-4;StartDistance=-185;EndDistance=-189;GTMatch=0;TruScore=72;MatchId=1299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:0/1:19:55:1/1:1:14:2:10:./.:3:0:2:0:0/0:8:0:./.:.:.:.:.:.
chr16	715214	HG3_Ill_GATKHCSBGrefine_10340	ACCTCAGTCTGCAGCCTGCTAGGGACGCACGGCCACACTCCTGTCTTTCAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10901:HG4_PB_SVrefine2Falcon1Dovetail_9602:HG4_Ill_SVrefine2DISCOVARDovetail_11111:HG4_Ill_250bpfermikitraw_20561:HG3_PB_SVrefine2PBcRDovetail_7442:HG3_PB_SVrefine2Falcon1Dovetail_9577:HG3_Ill_SVrefine2DISCOVARDovetail_11294:HG3_Ill_GATKHCSBGrefine_10340:HG3_Ill_250bpfermikitraw_20301:HG3_Ill_150bpfermikitraw_19760:HG2_PB_assemblyticsfalcon_9342:HG2_PB_SVrefine2PBcRplusDovetail_3788:HG2_PB_SVrefine2PB10Xhap12_11397:HG2_PB_SVrefine2Falcon2Bionano_7813:HG2_Ill_SpiralSDKrefine_5826:HG2_Ill_SVrefine2DISCOVARplusDovetail_4465:HG2_Ill_GATKHCSBGrefine_10422:HG2_Ill_250bpfermikitraw_20889:HG2_Ill_150bpfermikitraw_19706;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10901:HG4_PB_SVrefine2Falcon1Dovetail_9602:HG4_Ill_SVrefine2DISCOVARDovetail_11111:HG4_Ill_250bpfermikitraw_20561:HG3_PB_SVrefine2PBcRDovetail_7442:HG3_PB_SVrefine2Falcon1Dovetail_9577:HG3_Ill_SVrefine2DISCOVARDovetail_11294:HG3_Ill_GATKHCSBGrefine_10340:HG3_Ill_250bpfermikitraw_20301:HG3_Ill_150bpfermikitraw_19760:HG2_PB_assemblyticsfalcon_9342:HG2_PB_SVrefine2PBcRplusDovetail_3788:HG2_PB_SVrefine2PB10Xhap12_11397:HG2_PB_SVrefine2Falcon2Bionano_7813:HG2_Ill_SpiralSDKrefine_5826:HG2_Ill_SVrefine2DISCOVARplusDovetail_4465:HG2_Ill_GATKHCSBGrefine_10422:HG2_Ill_250bpfermikitraw_20889:HG2_Ill_150bpfermikitraw_19706;NumExactMatchSVs=19;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=7;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=1023;DistForward=14566;DistMin=1023;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=147;REFWIDENED=16:715215-715411;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:./.:0:0:0:1:./.:0:0:0:1:1/1:0:32:./.:.:.:.:.:.
chr16	1417551	HG4_Ill_scalpel_14447	ACCTGCGGCCCTCCCTCCCTCCCCTCCCATCTCACCCCCACACGCTCACCTGAGTCC	A	20	PASS	ClusterIDs=HG4_PB_HySA_22992:HG2_PB_assemblyticsfalcon_9385:HG2_PB_pbsv_15824:HG2_PB_assemblyticsfalcon_9384:HG4_PB_pbsv_15741:HG4_Ill_svaba_19564:HG4_Ill_scalpel_14447:HG4_Ill_GATKHC_24999:HG4_Ill_GATKHCSBGrefine_10797:HG4_Ill_Cortex_1246:HG3_Ill_Cortex_1296:HG2_Ill_svaba_19592:HG2_Ill_scalpel_14847:HG2_Ill_GATKHC_25091:HG2_Ill_Cortex_3036:HG4_PB_assemblyticsfalcon_9233;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_Cortex_3036:HG2_Ill_GATKHC_25091:HG2_Ill_scalpel_14847:HG2_Ill_svaba_19592:HG3_Ill_Cortex_1296:HG4_Ill_Cortex_1246:HG4_Ill_GATKHCSBGrefine_10797:HG4_Ill_GATKHC_24999:HG4_Ill_scalpel_14447:HG4_Ill_svaba_19564;NumExactMatchSVs=10;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.165289;PBcalls=6;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-56;DistBack=10027;DistForward=5184;DistMin=5184;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6138;REFWIDENED=16:1407814-1417558;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1302.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:13:0|1:19:1:1:9:./.:0:3:15:0:./.:4:2:./.:.:.:.:.:.
chr16	1557812	HG4_Ill_scalpel_14449	GGTGTGTGTGTGTGTGTGTGTGATGTGTGTTGGCCCGGGGTGTGTGTGTGTGTGTGTGTGTGT	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_9393:HG4_PB_pbsv_15749:HG3_PB_pbsv_15480:HG2_PB_pbsv_15834:HG2_PB_HySA_28782:HG4_Ill_svaba_19568:HG4_Ill_scalpel_14449:HG4_Ill_GATKHC_25003:HG4_Ill_GATKHCSBGrefine_10802:HG4_Ill_150bpfermikitraw_19827:HG3_Ill_svaba_19748:HG3_Ill_scalpel_15104:HG3_Ill_GATKHC_24939:HG3_Ill_GATKHCSBGrefine_10356:HG3_Ill_250bpfermikitraw_20317:HG2_Ill_scalpel_14849:HG2_Ill_Krunchall_21252:HG2_Ill_GATKHC_25099:HG2_Ill_GATKHCSBGrefine_10437:HG2_PB_assemblyticsPBcR_9069;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10437:HG2_Ill_GATKHC_25099:HG2_Ill_Krunchall_21252:HG2_Ill_scalpel_14849:HG3_Ill_250bpfermikitraw_20317:HG3_Ill_GATKHCSBGrefine_10356:HG3_Ill_GATKHC_24939:HG3_Ill_scalpel_15104:HG3_Ill_svaba_19748:HG4_Ill_150bpfermikitraw_19827:HG4_Ill_GATKHCSBGrefine_10802:HG4_Ill_GATKHC_25003:HG4_Ill_scalpel_14449:HG4_Ill_svaba_19568;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0787402;ClusterMaxSizeDiff=0.0787402;ClusterMaxEditDist=0.0944882;PBcalls=6;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=-30;DistForward=-26;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=29;REFWIDENED=16:1557811-1557904;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1304.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:24:0|1:27:2:1:22:./.:2:9:52:4:./.:2:15:./.:.:.:.:.:.
chr16	2084270	HG3_PB_SVrefine2PBcRDovetail_7468	CCCACCTCCTCCACTGAATTGGGCTCCTGTCCCCACGCCTTCCCTGCGTCCCAGGCCAGCCTGGGGGCCGTGCT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7849:HG2_PB_assemblyticsfalcon_9401:HG2_PB_assemblyticsPBcR_9076:HG4_PB_pbsv_15755:HG3_PB_HySA_23871:HG3_PB_pbsv_15488:HG2_PB_pbsv_15839:HG2_PB_HySA_28793:HG4_PB_SVrefine2Falcon1Dovetail_9644:HG3_PB_SVrefine2PBcRDovetail_7468:HG3_PB_SVrefine2Falcon1Dovetail_9616:HG3_Ill_SVrefine2DISCOVARDovetail_11314;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7849:HG4_PB_SVrefine2Falcon1Dovetail_9644:HG3_PB_SVrefine2PBcRDovetail_7468:HG3_PB_SVrefine2Falcon1Dovetail_9616:HG3_Ill_SVrefine2DISCOVARDovetail_11314;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0680272;ClusterMaxSizeDiff=0.0680272;ClusterMaxEditDist=0.151724;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-73;DistBack=24479;DistForward=-74;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=511;REFWIDENED=16:2084271-2084854;PctSeqSimilarity=0.9635;PctSizeSimilarity=1;PctRecOverlap=0.3919;SizeDiff=0;StartDistance=-45;EndDistance=-45;GTMatch=0;TruScore=78;MatchId=1305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:5:29:1/1:2:15:1:4:./.:2:0:4:0:0/0:28:0:./.:.:.:.:.:.
chr16	2349008	HG2_Ill_GATKHC_25105	AGACAGAGGCGGTGAGGAGGGCAGGGGTCCCTGGGGGTCCCCCTGCATTCATG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11450:HG4_PB_assemblyticsfalcon_9247:HG3_PB_assemblyticsfalcon_9380:HG4_PB_pbsv_15756:HG2_PB_pbsv_15841:HG4_Ill_GATKHC_25012:HG4_Ill_250bpfermikitraw_20590:HG2_Ill_GATKHC_25105:HG2_Ill_250bpfermikitraw_20913:HG4_PB_SVrefine2PBcRDovetail_7853:HG2_PB_SVrefine2PBcRplusDovetail_3829;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_20913:HG2_Ill_GATKHC_25105:HG4_Ill_250bpfermikitraw_20590:HG4_Ill_GATKHC_25012;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0576923;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.134615;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-52;DistBack=-150;DistForward=-8;DistMin=-150;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=187;REFWIDENED=16:2349002-2349240;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1306.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:24:0|1:21:1:2:23:./.:0:5:1:1:0/1:25:17:./.:.:.:.:.:.
chr16	5970911	HG4_Ill_250bpfermikitraw_20629	ACGTGCAGTGGTGGGATGTGAACATGTGCCGTGCAAGGCTACCTGAAGAATCTGTTCTCCT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_15867:HG2_PB_HySA_28849:HG4_Ill_GATKHC_25056:HG4_Ill_GATKHCSBGrefine_10812:HG2_Ill_GATKHC_25144:HG2_Ill_GATKHCSBGrefine_10446:HG4_Ill_manta_3676:HG2_CG_vcfBeta_8916:HG2_Ill_SpiralSDKrefine_5875:HG4_PB_HySA_23037:HG4_Ill_Spiral_1231:HG2_Ill_Spiral_1038:HG4_Ill_svaba_19605:HG4_Ill_scalpel_14480:HG4_Ill_Krunchall_21631:HG4_Ill_250bpfermikitraw_20629:HG4_10X_allpass_2891:HG2_Ill_svaba_19632:HG2_Ill_scalpel_14873:HG2_Ill_breakscan11_2278:HG2_Ill_Krunchall_21296:HG2_Ill_250bpfermikitraw_20948:HG2_Ill_150bpfermikitraw_19765:HG2_10X_allpass_2474:HG4_PB_pbsv_15781;NumClusterSVs=25;ExactMatchIDs=HG2_10X_allpass_2474:HG2_Ill_150bpfermikitraw_19765:HG2_Ill_250bpfermikitraw_20948:HG2_Ill_Krunchall_21296:HG2_Ill_breakscan11_2278:HG2_Ill_scalpel_14873:HG2_Ill_svaba_19632:HG4_10X_allpass_2891:HG4_Ill_250bpfermikitraw_20629:HG4_Ill_Krunchall_21631:HG4_Ill_scalpel_14480:HG4_Ill_svaba_19605;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.0655738;PBcalls=4;Illcalls=18;TenXcalls=2;CGcalls=1;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=11;NumTechs=4;NumTechsExact=2;SVLEN=-60;DistBack=64305;DistForward=9446;DistMin=9446;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:5970910-5970973;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.9833;PctRecOverlap=0.9836;SizeDiff=1;StartDistance=0;EndDistance=1;GTMatch=0;TruScore=98;MatchId=1309.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:22:0|1:26:1:1:20:1|0:0:21:19:0:0/1:35:24:./.:.:.:.:.:.
chr16	6909120	HG2_Ill_250bpfermikitraw_20959	ATATATATATACATATATATACGTATATATATATGTATATATATACGTATATATATGTATATATATG	A	20	PASS	ClusterIDs=HG3_PB_HySA_23953:HG3_Ill_manta_3531:HG2_Ill_manta_4329:HG2_Ill_SpiralSDKrefine_5884:HG4_Ill_Spiral_1232:HG3_Ill_Spiral_16282:HG2_Ill_Spiral_1040:HG4_Ill_svaba_19623:HG4_Ill_scalpel_14491:HG4_Ill_Krunchall_21647:HG4_Ill_250bpfermikitraw_20646:HG4_Ill_150bpfermikitraw_19888:HG3_Ill_svaba_19801:HG3_Ill_Krunchall_20907:HG3_Ill_250bpfermikitraw_20375:HG3_Ill_150bpfermikitraw_19835:HG2_Ill_svaba_19647:HG2_Ill_scalpel_14888:HG2_Ill_Krunchall_21308:HG2_Ill_250bpfermikitraw_20959:HG2_Ill_150bpfermikitraw_19781:HG2_PB_pbsv_15871:HG4_Ill_svaba_19622:HG3_PB_pbsv_15523:HG2_Ill_svaba_19646:HG4_PB_pbsv_15787:HG2_PB_HySA_28875:HG2_PB_assemblyticsPBcR_9129:HG2_PB_assemblyticsfalcon_9451;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_19781:HG2_Ill_250bpfermikitraw_20959:HG2_Ill_Krunchall_21308:HG2_Ill_scalpel_14888:HG2_Ill_svaba_19647:HG3_Ill_150bpfermikitraw_19835:HG3_Ill_250bpfermikitraw_20375:HG3_Ill_Krunchall_20907:HG3_Ill_svaba_19801:HG4_Ill_150bpfermikitraw_19888:HG4_Ill_250bpfermikitraw_20646:HG4_Ill_Krunchall_21647:HG4_Ill_scalpel_14491:HG4_Ill_svaba_19623;NumExactMatchSVs=14;ClusterMaxShiftDist=0.385965;ClusterMaxSizeDiff=0.385965;ClusterMaxEditDist=0.389381;PBcalls=7;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=33073;DistForward=-66;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=34;REFWIDENED=16:6909113-6909212;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1311.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:58:./.:0:8:0:3:1/1:0:25:1:17:1/1:0:50:./.:.:.:.:.:.
chr16	8066621	HG4_PB_SVrefine2Falcon1Dovetail_9662	GAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGAACAAATAGAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10977:HG3_Ill_MetaSV_1856:HG2_Ill_MetaSV_1748:HG2_PB_assemblyticsfalcon_9465:HG4_PB_assemblyticsfalcon_9303:HG4_PB_SVrefine2Falcon1Dovetail_9662:HG3_PB_assemblyticsfalcon_9450:HG3_PB_SVrefine2Falcon1Dovetail_9636:HG3_PB_HySA_23964:HG3_Ill_manta_3533:HG3_10X_allpass_3036:HG2_PB_SVrefine2Falcon1plusDovetail_4105:HG2_Ill_manta_4332:HG2_Ill_SpiralSDKrefine_5892:HG2_10X_allpass_2475:HG2_PB_assemblyticsPBcR_9141:HG2_Ill_tnscope_1713:HG3_PB_pbsv_15533:HG3_PB_SVrefine2PBcRDovetail_7490:HG3_Ill_SVrefine2DISCOVARDovetail_11349:HG3_Ill_Krunchall_20924:HG2_PB_pbsv_15881:HG2_PB_SVrefine2PBcRplusDovetail_3848:HG2_PB_SVrefine2PB10Xhap12_11472:HG2_Ill_Krunchall_21325;NumClusterSVs=25;ExactMatchIDs=HG2_10X_allpass_2475:HG2_Ill_SpiralSDKrefine_5892:HG2_Ill_manta_4332:HG2_PB_SVrefine2Falcon1plusDovetail_4105:HG3_10X_allpass_3036:HG3_Ill_manta_3533:HG3_PB_HySA_23964:HG3_PB_SVrefine2Falcon1Dovetail_9636:HG3_PB_assemblyticsfalcon_9450:HG4_PB_SVrefine2Falcon1Dovetail_9662:HG4_PB_assemblyticsfalcon_9303;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0873635;ClusterMaxSizeDiff=0.0873635;ClusterMaxEditDist=0.0873635;PBcalls=13;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=-227;DistForward=-326;DistMin=-326;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:8066622-8066948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:40:0|1:20:1:1:34:0|1:37:0:1:30:0/1:24:22:0/1:23:12:.:.:.
chr16	8754688	HG3_PB_assemblyticsfalcon_9464	GGGAGGAGGGGGAGGAGGGGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGA	G	10	PASS	ClusterIDs=HG2_PB_pbsv_15887:HG2_PB_assemblyticsPBcR_9151:HG4_PB_assemblyticsfalcon_9315:HG3_PB_assemblyticsfalcon_9464:HG2_PB_assemblyticsfalcon_9474:HG3_PB_pbsv_15541:HG3_PB_HySA_23977:HG4_PB_HySA_23072:HG2_PB_HySA_28914:HG4_PB_pbsv_15801;NumClusterSVs=10;ExactMatchIDs=HG2_PB_assemblyticsfalcon_9474:HG3_PB_assemblyticsfalcon_9464:HG4_PB_assemblyticsfalcon_9315;NumExactMatchSVs=3;ClusterMaxShiftDist=0.141732;ClusterMaxSizeDiff=0.141732;ClusterMaxEditDist=0.141732;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-66;DistBack=-52;DistForward=8112;DistMin=-52;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=56;REFWIDENED=16:8754641-8754762;PctSeqSimilarity=0.9552;PctSizeSimilarity=0.9091;PctRecOverlap=0.7015;SizeDiff=6;StartDistance=14;EndDistance=20;GTMatch=0;TruScore=85;MatchId=1313.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:64:./.:0:0:0:0:./.:0:0:0:0:./.:2:1:./.:.:.:.:.:.
chr16	9867797	HG2_PB_SVrefine2PBcRplusDovetail_3855	CTAAAAGGGAACAGGCAAGGGTAATTGAGGCAGTGTTGTGTGTGTGTGTCTCCAACTTGCTTCCATTCCATT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_15808:HG4_Ill_Krunchall_21689:HG2_Ill_Spiral_1043:HG2_PB_pbsv_15894:HG4_Ill_svaba_19661:HG4_Ill_manta_3680:HG4_Ill_SVrefine2DISCOVARDovetail_11173:HG4_Ill_Krunchall_21688:HG4_Ill_GATKHC_25140:HG4_Ill_GATKHCSBGrefine_10835:HG4_Ill_250bpfermikitraw_20691:HG2_PB_SVrefine2PBcRplusDovetail_3855:HG2_PB_SVrefine2PB10Xhap12_11480:HG2_Ill_svaba_19683:HG2_Ill_manta_4338:HG2_Ill_SVrefine2DISCOVARplusDovetail_4535:HG2_Ill_Krunchall_21356:HG2_Ill_GATKHC_25215:HG2_Ill_GATKHCSBGrefine_10471:HG2_Ill_250bpfermikitraw_21003:HG2_10X_SVrefine210Xhap12_10987;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10987:HG2_Ill_250bpfermikitraw_21003:HG2_Ill_GATKHCSBGrefine_10471:HG2_Ill_GATKHC_25215:HG2_Ill_Krunchall_21356:HG2_Ill_SVrefine2DISCOVARplusDovetail_4535:HG2_Ill_manta_4338:HG2_Ill_svaba_19683:HG2_PB_SVrefine2PB10Xhap12_11480:HG2_PB_SVrefine2PBcRplusDovetail_3855:HG4_Ill_250bpfermikitraw_20691:HG4_Ill_GATKHCSBGrefine_10835:HG4_Ill_GATKHC_25140:HG4_Ill_Krunchall_21688:HG4_Ill_SVrefine2DISCOVARDovetail_11173:HG4_Ill_manta_3680:HG4_Ill_svaba_19661;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0277778;ClusterMaxSizeDiff=0.0277778;ClusterMaxEditDist=0.0422535;PBcalls=4;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-71;DistBack=13565;DistForward=-58;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=71;REFWIDENED=16:9867798-9867939;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1314.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:45:./.:9:26:18:11:./.:0:13:17:2:0/1:30:22:./.:.:.:.:.:.
chr16	10297594	HG2_Ill_GATKHC_25220	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_9494:HG3_Ill_GATKHC_25066:HG3_Ill_GATKHCSBGrefine_10395:HG2_Ill_GATKHC_25221:HG2_Ill_GATKHCSBGrefine_10473:HG4_PB_assemblyticsfalcon_9336:HG2_PB_HySA_28938:HG2_PB_assemblyticsPBcR_9169:HG4_PB_HySA_23096:HG4_Ill_GATKHC_25143:HG4_Ill_GATKHCSBGrefine_10837:HG2_Ill_GATKHC_25220:HG2_Ill_GATKHCSBGrefine_10472:HG2_Ill_manta_4340:HG2_PB_pbsv_15897:HG4_PB_pbsv_15812:HG4_Ill_Krunchall_21692:HG4_Ill_250bpfermikitraw_20695:HG2_Ill_Krunchall_21359:HG2_Ill_250bpfermikitraw_21007:HG3_Ill_250bpfermikitraw_20426:HG2_Ill_150bpfermikitraw_19825;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10472:HG2_Ill_GATKHC_25220:HG4_Ill_GATKHCSBGrefine_10837:HG4_Ill_GATKHC_25143;NumExactMatchSVs=4;ClusterMaxShiftDist=0.4;ClusterMaxSizeDiff=0.4;ClusterMaxEditDist=0.4;PBcalls=7;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=3;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-53;DistBack=22567;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=16:10297593-10297650;PctSeqSimilarity=0.918;PctSizeSimilarity=0.717;PctRecOverlap=0.0926;SizeDiff=15;StartDistance=34;EndDistance=49;GTMatch=0;TruScore=57;MatchId=1315.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:1/1:2:19:0:17:./.:5:9:12:1:0/1:9:17:./.:.:.:.:.:.
chr16	12002319	HG3_PB_SVrefine2PBcRDovetail_7507	TAAAAATACAAAAATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGACTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_10997:HG2_10X_allpass_2476:HG2_PB_assemblyticsPBcR_9188:HG2_PB_SVrefine2PBcRplusDovetail_3866:HG3_10X_allpass_3038:HG2_PB_assemblyticsfalcon_9514:HG3_Ill_Krunchall_20982:HG2_Ill_Krunchall_21383:HG4_PB_assemblyticsfalcon_9353:HG2_PB_HySA_28954:HG2_PB_SVrefine2PB10Xhap12_11494:HG3_PB_HySA_24011:HG3_Ill_MetaSV_1865:HG2_Ill_tnscope_1714:HG2_Ill_MetaSV_1758:HG4_PB_SVrefine2Falcon1Dovetail_9683:HG3_PB_pbsv_15565:HG3_PB_SVrefine2PBcRDovetail_7507:HG3_PB_SVrefine2Falcon1Dovetail_9663:HG3_Ill_scalpel_15203:HG3_Ill_manta_3538:HG3_Ill_SVrefine2DISCOVARDovetail_11368:HG3_Ill_GATKHCSBGrefine_10401:HG2_PB_pbsv_15913:HG2_PB_SVrefine2PB10Xhap12_11493:HG2_PB_SVrefine2Falcon1plusDovetail_4121:HG2_Ill_manta_4344:HG2_Ill_GATKHCSBGrefine_10478;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10997:HG4_PB_SVrefine2Falcon1Dovetail_9683:HG3_PB_pbsv_15565:HG3_PB_SVrefine2PBcRDovetail_7507:HG3_PB_SVrefine2Falcon1Dovetail_9663:HG3_Ill_scalpel_15203:HG3_Ill_manta_3538:HG3_Ill_SVrefine2DISCOVARDovetail_11368:HG3_Ill_GATKHCSBGrefine_10401:HG2_PB_pbsv_15913:HG2_PB_SVrefine2PB10Xhap12_11493:HG2_PB_SVrefine2Falcon1plusDovetail_4121:HG2_Ill_manta_4344:HG2_Ill_GATKHCSBGrefine_10478;NumExactMatchSVs=14;ClusterMaxShiftDist=0.178462;ClusterMaxSizeDiff=0.178462;ClusterMaxEditDist=0.178462;PBcalls=14;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=104760;DistForward=-323;DistMin=-323;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=16:12002320-12002661;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:28:0|1:10:3:2:17:0|1:22:0:0:14:0/1:25:18:0/1:19:5:.:.:.
chr16	13944337	HG2_PB_SVrefine2Falcon1plusDovetail_4126	GTTTTAAAAATAAAGTTTATCTTTTGTTCTAAAACAAAGTTTTAAAAAAACTACTACAAATGAAACATAGGACTAGCTGACCACATTTCATTTGCACTTCATC	A	20	PASS	ClusterIDs=HG3_PB_HySA_24027:HG3_Ill_GATKHC_25110:HG3_Ill_GATKHCSBGrefine_10412:HG4_Ill_GATKHCSBGrefine_10844:HG3_Ill_GATKHC_25109:HG3_Ill_GATKHCSBGrefine_10411:HG2_Ill_GATKHC_25267:HG2_Ill_GATKHCSBGrefine_10483:HG4_PB_HySA_23122:HG2_PB_HySA_28974:HG2_Ill_SpiralSDKrefine_5947:HG3_PB_SVrefine2PBcRDovetail_7516:HG4_PB_SVrefine2PBcRDovetail_7889:HG4_Ill_SVrefine2DISCOVARDovetail_11193:HG3_PB_assemblyticsfalcon_9522:HG3_PB_SVrefine2Falcon1Dovetail_9672:HG3_Ill_SVrefine2DISCOVARDovetail_11376:HG2_PB_assemblyticsfalcon_9531:HG2_PB_assemblyticsPBcR_9202:HG2_PB_SVrefine2PBcRplusDovetail_3871:HG2_PB_SVrefine2PB10Xhap12_11498:HG2_PB_SVrefine2Falcon1plusDovetail_4126:HG2_PB_PB10Xdip_11232:HG2_Ill_manta_4347:HG2_Ill_SVrefine2DISCOVARplusDovetail_4551:HG4_Ill_Spiral_1236:HG4_Ill_MetaSV_1810:HG3_Ill_Spiral_16359:HG3_Ill_MetaSV_1867:HG2_Ill_Spiral_1046:HG2_Ill_MetaSV_1759:HG4_Ill_250bpfermikitraw_20726:HG4_Ill_150bpfermikitraw_19957:HG3_Ill_scalpel_15217:HG3_10X_allpass_3042:HG2_Ill_breakscan11_2280:HG2_Ill_150bpfermikitraw_19858:HG4_PB_pbsv_15833:HG3_PB_pbsv_15578:HG2_PB_pbsv_15920:HG4_PB_assemblyticsfalcon_9371;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4551:HG2_Ill_manta_4347:HG2_PB_PB10Xdip_11232:HG2_PB_SVrefine2Falcon1plusDovetail_4126:HG2_PB_SVrefine2PB10Xhap12_11498:HG2_PB_SVrefine2PBcRplusDovetail_3871:HG2_PB_assemblyticsPBcR_9202:HG2_PB_assemblyticsfalcon_9531:HG3_Ill_SVrefine2DISCOVARDovetail_11376:HG3_PB_SVrefine2Falcon1Dovetail_9672:HG3_PB_assemblyticsfalcon_9522:HG4_Ill_SVrefine2DISCOVARDovetail_11193:HG4_PB_SVrefine2PBcRDovetail_7889;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0904523;ClusterMaxSizeDiff=0.0904523;ClusterMaxEditDist=0.0909091;PBcalls=17;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=14;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-102;DistBack=-43;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=16:13944337-13944439;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.9903;PctRecOverlap=0.9904;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1319.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:0:25:1:8:1/1:0:14:0:11:1/1:0:32:./.:.:.:.:.:.
chr16	14075622	HG2_Ill_svaba_19727	TGCCTATACCTATTCTCATAAGGCCTGTCCTGATGCAGGATGGAAATGGGGGCTATAGGGAAAGGGCACTCAACTCTCTTTGTGTCACTAGATAATAGCTCAGAACTCTGAGGAACCTGG	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_21399:HG3_PB_SVrefine2Falcon1Dovetail_9673:HG3_Ill_svaba_19887:HG3_Ill_manta_3541:HG3_Ill_MetaSV_1868:HG3_Ill_GATKHCSBGrefine_10413:HG3_Ill_Cortex_1324:HG3_CG_vcfBeta_8515:HG3_10X_allpass_3043:HG2_PB_pbsv_15921:HG2_Ill_svaba_19727:HG2_Ill_SpiralSDKrefine_5948:HG2_Ill_SVrefine2DISCOVARplusDovetail_4552:HG2_Ill_MetaSV_1760:HG2_Ill_GATKHCSBGrefine_10484:HG2_Ill_Cortex_3105:HG2_CG_vcfBeta_8955:HG2_10X_allpass_2477:HG3_PB_pbsv_15579:HG3_Ill_Krunchall_21002;NumClusterSVs=20;ExactMatchIDs=HG2_10X_allpass_2477:HG2_CG_vcfBeta_8955:HG2_Ill_Cortex_3105:HG2_Ill_GATKHCSBGrefine_10484:HG2_Ill_MetaSV_1760:HG2_Ill_SVrefine2DISCOVARplusDovetail_4552:HG2_Ill_SpiralSDKrefine_5948:HG2_Ill_svaba_19727:HG2_PB_pbsv_15921:HG3_10X_allpass_3043:HG3_CG_vcfBeta_8515:HG3_Ill_Cortex_1324:HG3_Ill_GATKHCSBGrefine_10413:HG3_Ill_MetaSV_1868:HG3_Ill_manta_3541:HG3_Ill_svaba_19887:HG3_PB_SVrefine2Falcon1Dovetail_9673;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0334728;ClusterMaxSizeDiff=0.0083682;ClusterMaxEditDist=0.184874;PBcalls=3;Illcalls=13;TenXcalls=2;CGcalls=2;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=2;HG2count=10;HG3count=10;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-119;DistBack=82658;DistForward=-118;DistMin=-118;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:14075623-14075742;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1320.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:26:0|1:46:0:0:25:0|1:52:0:0:30:0/1:42:10:./.:.:.:.:.:.
chr16	14453235	HG2_Ill_GATKHCSBGrefine_10487	TTTGGAAAACTTTAGGACAGAGAAGGACAACTCACTGGTCCAAGGTGCAAACTGGGTGTGGTAGGAGCAGCCCAGTATTAAGGTGAACCTCATCACCCAGCAGGAAGAGCCCTGGGGAGGGGATTTGGGCAATTCACACACCTGCAATTCACACCCCAGCCTTTGCTCATGCTGTTCCCTCTGCTTGGAAGGTCCCCTCTCTACTTCTCTGCCTACCCAGATCCCCTCAATCTCTTACAACTCATCTGGGGTTCCTGTGCCTCCAGGAAGTTCCCTGATCAGCCCTCTTCCACCTAGCCTGGTGTTGGAGGGTGGTCAGGTTCCCTCCTGCAACACCCCTCATTTGCTGTGCACGTCACCCTGGATTGGATGGGCTGTTTACTCCTGATACCCCAGGGGACCATGGGCACCTCTAGGGC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_15923:HG2_PB_SVrefine2PBcRplusDovetail_3872:HG2_10X_allpass_2478:HG2_PB_assemblyticsPBcR_9208:HG3_Ill_manta_3543:HG3_Ill_SVrefine2DISCOVARDovetail_11377:HG3_Ill_GATKHCSBGrefine_10416:HG3_10X_allpass_3045:HG2_PB_SVrefine2PB10Xhap12_11499:HG2_PB_PB10Xdip_11234:HG2_Ill_breakscan11_2281:HG2_Ill_SpiralSDKrefine_5955:HG2_Ill_GATKHCSBGrefine_10487:HG3_Ill_Spiral_16368:HG2_Ill_tnscope_1715:HG2_Ill_Spiral_1047:HG2_Ill_MetaSV_1761;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10487:HG2_Ill_SpiralSDKrefine_5955:HG2_Ill_breakscan11_2281:HG2_PB_PB10Xdip_11234:HG2_PB_SVrefine2PB10Xhap12_11499:HG3_10X_allpass_3045:HG3_Ill_GATKHCSBGrefine_10416:HG3_Ill_SVrefine2DISCOVARDovetail_11377:HG3_Ill_manta_3543;NumExactMatchSVs=9;ClusterMaxShiftDist=0.011976;ClusterMaxSizeDiff=0.011976;ClusterMaxEditDist=0.0143369;PBcalls=5;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-418;DistBack=-419;DistForward=-419;DistMin=-419;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=0/0;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:14453236-14453654;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:14:./.:16:1:5:13:0|1:59:0:0:20:0/1:57:15:0/1:30:8:.:.:0.709876
chr16	14470517	HG2_Ill_GATKHCSBGrefine_10488	CTTTTAGTAGAGACGGGGTTTTGACATGTTGGCCAGGCTGGTCTCAAACTCCTGCCCGCTAGTGATTCACCCGCCTTGACCTCCCAAAGTGCTGAGCCACCAAGCCCAGCCCCAAGTCTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGTTGCAATGCAGTGGCACAATCTCAGCTCACTGCAGCCTCCATCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCATGCCTGGCTAATTTTGTAT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4553:HG4_Ill_Krunchall_21731:HG2_PB_pbsv_15924:HG4_PB_pbsv_15834:HG2_PB_PB10Xdip_11235:HG4_Ill_MetaSV_1811:HG2_PB_HySA_28980:HG2_Ill_MetaSV_1762:HG4_PB_HySA_23128:HG4_Ill_svaba_19711:HG4_Ill_scalpel_14556:HG4_Ill_manta_3686:HG4_Ill_GATKHCSBGrefine_10845:HG4_10X_allpass_2894:HG2_Ill_svaba_19740:HG2_Ill_SpiralSDKrefine_5956:HG2_Ill_GATKHCSBGrefine_10488:HG3_PB_SVrefine2Falcon1Dovetail_9675:HG4_PB_SVrefine2PBcRDovetail_7891:HG4_Ill_SVrefine2DISCOVARDovetail_11197:HG2_PB_SVrefine2PBcRplusDovetail_3873:HG2_PB_SVrefine2PB10Xhap12_11500;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10488:HG2_Ill_SpiralSDKrefine_5956:HG2_Ill_svaba_19740:HG4_10X_allpass_2894:HG4_Ill_GATKHCSBGrefine_10845:HG4_Ill_manta_3686:HG4_Ill_scalpel_14556:HG4_Ill_svaba_19711:HG4_PB_HySA_23128;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0204778;ClusterMaxSizeDiff=0.0204778;ClusterMaxEditDist=0.112628;PBcalls=9;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-292;DistBack=16863;DistForward=-201;DistMin=-201;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=263;REFWIDENED=16:14470346-14470900;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:28:./.:19:11:1:12:1|0:0:20:53:0:0/1:41:19:./.:.:.:.:.:.
chr16	16934363	HG2_Ill_MetaSV_1764	TAAGCTTAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAATATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGAGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGGTGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATATTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGTAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGTATTTTCTTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCTGCTGTTAGTCTGATAGGCTTCCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAATGTCGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAGATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCATGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGCCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCATCCATCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTC	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_21425:HG2_PB_HySA_28994:HG2_PB_assemblyticsfalcon_9551:HG2_PB_assemblyticsPBcR_9221:HG3_PB_assemblyticsfalcon_9541:HG2_10X_allpass_2479:HG4_10X_allpass_2895:HG2_Ill_tnscope_1716:HG4_PB_pbsv_15849:HG4_Ill_MetaSV_1815:HG4_Ill_GATKHCSBGrefine_10857:HG3_PB_pbsv_15594:HG3_PB_SVrefine2Falcon1Dovetail_9682:HG3_Ill_MetaSV_1873:HG3_Ill_GATKHCSBGrefine_10425:HG2_PB_pbsv_15939:HG2_PB_SVrefine2PBcRplusDovetail_3882:HG2_PB_SVrefine2PB10Xhap12_11515:HG2_PB_SVrefine2Falcon1plusDovetail_4134:HG2_Ill_breakscan11_2285:HG2_Ill_SVrefine2DISCOVARplusDovetail_4561:HG2_Ill_MetaSV_1764:HG2_Ill_GATKHCSBGrefine_10499:HG2_10X_SVrefine210Xhap12_11006:HG3_Ill_Krunchall_21030:HG4_Ill_Krunchall_21749:HG3_Ill_Krunchall_21029;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11006:HG2_Ill_GATKHCSBGrefine_10499:HG2_Ill_MetaSV_1764:HG2_Ill_SVrefine2DISCOVARplusDovetail_4561:HG2_Ill_breakscan11_2285:HG2_PB_SVrefine2Falcon1plusDovetail_4134:HG2_PB_SVrefine2PB10Xhap12_11515:HG2_PB_SVrefine2PBcRplusDovetail_3882:HG2_PB_pbsv_15939:HG3_Ill_GATKHCSBGrefine_10425:HG3_Ill_MetaSV_1873:HG3_PB_SVrefine2Falcon1Dovetail_9682:HG3_PB_pbsv_15594:HG4_Ill_GATKHCSBGrefine_10857:HG4_Ill_MetaSV_1815:HG4_PB_pbsv_15849;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00743433;ClusterMaxSizeDiff=0.00743433;ClusterMaxEditDist=0.0208144;PBcalls=11;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-6051;DistBack=179;DistForward=-6037;DistMin=-6037;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=16:16934364-16940429;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1323.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:91:1/1:2:23:0:9:1/1:0:20:0:27:1/1:0:26:1/1:3:369:6018:.:.
chr16	17226338	HG3_PB_SVrefine2Falcon1Dovetail_9683	AATGGCAACTGGCAACTAAGATACCAGCAATGACCTGAACCCTGAGCAGTTAGTAC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11008:HG4_PB_pbsv_15851:HG2_PB_pbsv_15941:HG3_PB_pbsv_15596:HG2_PB_HySA_28996:HG4_PB_HySA_23142:HG4_Ill_svaba_19733:HG4_Ill_scalpel_14575:HG4_Ill_manta_3691:HG4_Ill_Krunchall_21752:HG4_Ill_GATKHCSBGrefine_10858:HG4_Ill_250bpfermikitraw_20750:HG4_Ill_150bpfermikitraw_19982:HG3_PB_SVrefine2Falcon1Dovetail_9683:HG3_Ill_svaba_19923:HG3_Ill_manta_3545:HG3_Ill_Krunchall_21036:HG3_Ill_GATKHCSBGrefine_10426:HG3_Ill_250bpfermikitraw_20491:HG2_PB_SVrefine2PB10Xhap12_11517:HG2_PB_SVrefine2Falcon1plusDovetail_4136:HG2_Ill_svaba_19765:HG2_Ill_SpiralSDKrefine_5974:HG2_Ill_SVrefine2DISCOVARplusDovetail_4564:HG2_Ill_GATKHCSBGrefine_10500:HG2_Ill_250bpfermikitraw_21073:HG2_Ill_150bpfermikitraw_19889;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11008:HG4_PB_HySA_23142:HG4_Ill_svaba_19733:HG4_Ill_scalpel_14575:HG4_Ill_manta_3691:HG4_Ill_Krunchall_21752:HG4_Ill_GATKHCSBGrefine_10858:HG4_Ill_250bpfermikitraw_20750:HG4_Ill_150bpfermikitraw_19982:HG3_PB_SVrefine2Falcon1Dovetail_9683:HG3_Ill_svaba_19923:HG3_Ill_manta_3545:HG3_Ill_Krunchall_21036:HG3_Ill_GATKHCSBGrefine_10426:HG3_Ill_250bpfermikitraw_20491:HG2_PB_SVrefine2PB10Xhap12_11517:HG2_PB_SVrefine2Falcon1plusDovetail_4136:HG2_Ill_svaba_19765:HG2_Ill_SpiralSDKrefine_5974:HG2_Ill_SVrefine2DISCOVARplusDovetail_4564:HG2_Ill_GATKHCSBGrefine_10500:HG2_Ill_250bpfermikitraw_21073:HG2_Ill_150bpfermikitraw_19889;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0181818;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.0363636;PBcalls=8;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-55;DistBack=0;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=57;REFWIDENED=16:17226339-17226450;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:23:./.:4:13:14:9:1|0:0:12:27:1:0/1:17:26:./.:.:.:.:.:.
chr16	17599461	HG2_PB_SVrefine2PB10Xhap12_11520	CCCTCACCTCCCGGATGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCACCTGCCTCCCGGTCGGGGCGGCTGGCCGGGTGGGGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11520:HG2_PB_pbsv_15944:HG3_PB_pbsv_15599:HG4_PB_pbsv_15854:HG2_PB_assemblyticsfalcon_9558:HG2_PB_SVrefine2Falcon1plusDovetail_4138:HG4_10X_allpass_2896:HG2_PB_SVrefine2PBcRplusDovetail_3886;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_11520:HG2_PB_SVrefine2PBcRplusDovetail_3886;NumExactMatchSVs=2;ClusterMaxShiftDist=0.204082;ClusterMaxSizeDiff=0.204082;ClusterMaxEditDist=0.218274;PBcalls=7;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-177;DistBack=34682;DistForward=-133;DistMin=-133;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=313;REFWIDENED=16:17599462-17599951;PctSeqSimilarity=0.9176;PctSizeSimilarity=1;PctRecOverlap=0.5281;SizeDiff=0;StartDistance=-84;EndDistance=-84;GTMatch=0;TruScore=81;MatchId=1325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:1/1:0:27:0:21:./.:12:1:15:1:0/1:23:6:./.:.:.:.:.:.
chr16	18832524	HG2_PB_SVrefine2Falcon2Bionano_7851	TGAGATATTTAGTATGTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTATTATACTCTCAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCGCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGACTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGTTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACACCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACATTTAAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTTCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAAGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGCGCTGAGATGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCGTCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTGAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCCATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATTGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTAGTGAGGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTAGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACACTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGTAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTACGTCCGTCACCCCTTTCTTTGACTCG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2286:HG3_10X_allpass_3047:HG4_Ill_Krunchall_21770:HG2_PB_assemblyticsPBcR_9236:HG2_PB_assemblyticsfalcon_9569:HG4_10X_allpass_2897:HG2_10X_allpass_2481:HG2_Ill_tnscope_1717:HG4_PB_pbsv_15860:HG4_Ill_SVrefine2DISCOVARDovetail_11206:HG4_Ill_MetaSV_1818:HG4_Ill_GATKHCSBGrefine_10867:HG3_PB_pbsv_15606:HG3_Ill_MetaSV_1875:HG3_Ill_GATKHCSBGrefine_10434:HG2_PB_pbsv_15951:HG2_PB_SVrefine2PB10Xhap12_11526:HG2_PB_SVrefine2Falcon2Bionano_7851:HG2_Ill_SpiralSDKrefine_5986:HG2_Ill_MetaSV_1767:HG2_Ill_GATKHCSBGrefine_10512;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10512:HG2_Ill_MetaSV_1767:HG2_Ill_SpiralSDKrefine_5986:HG2_PB_SVrefine2Falcon2Bionano_7851:HG2_PB_SVrefine2PB10Xhap12_11526:HG2_PB_pbsv_15951:HG3_Ill_GATKHCSBGrefine_10434:HG3_Ill_MetaSV_1875:HG3_PB_pbsv_15606:HG4_Ill_GATKHCSBGrefine_10867:HG4_Ill_MetaSV_1818:HG4_Ill_SVrefine2DISCOVARDovetail_11206:HG4_PB_pbsv_15860;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00667351;ClusterMaxSizeDiff=0.00667351;ClusterMaxEditDist=0.00667351;PBcalls=7;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-5852;DistBack=57652;DistForward=-5833;DistMin=-5833;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=16:18832525-18838396;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1326.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:83:1/1:5:27:0:18:1/1:0:30:0:33:1/1:0:36:1/1:3:415:5753:.:.
chr16	18967565	HG2_PB_assemblyticsfalcon_9572	CCATGCAGCTGCCCCCACGGTGGACCTGCCTGGCCCCGGGTCGTCCTTTCTATCCATGCAGCTGCCCCCACGGTGGACCTGCCTGGCCCCGGGTCGTCCTTTCTATCCATGCAGCTGCCCCCACGGTGGACCTGCCTGGCCCCGGGTCGTCCTTTCTATT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11017:HG3_PB_HySA_24064:HG4_Ill_Spiral_1237:HG4_Ill_Krunchall_21771:HG2_Ill_Spiral_1048:HG2_Ill_Krunchall_21445:HG4_Ill_svaba_19745:HG4_Ill_manta_3692:HG4_Ill_GATKHC_25238:HG4_Ill_GATKHCSBGrefine_10869:HG4_Ill_250bpfermikitraw_20765:HG4_Ill_150bpfermikitraw_19998:HG4_10X_allpass_2898:HG3_Ill_svaba_19936:HG3_Ill_manta_3548:HG3_Ill_GATKHCSBGrefine_10435:HG2_PB_assemblyticsfalcon_9572:HG2_PB_SVrefine2Falcon1plusDovetail_4143:HG2_Ill_svaba_19779:HG2_Ill_SVrefine2DISCOVARplusDovetail_4574:HG2_Ill_GATKHC_25330:HG2_Ill_GATKHCSBGrefine_10514:HG2_Ill_250bpfermikitraw_21091:HG2_Ill_150bpfermikitraw_19903:HG2_10X_allpass_2482:HG4_Ill_MetaSV_1820:HG2_PB_HySA_29027:HG2_Ill_breakscan11_2287:HG3_PB_pbsv_15610:HG2_PB_pbsv_15954:HG4_PB_pbsv_15862:HG4_PB_HySA_23164:HG4_PB_SVrefine2PBcRDovetail_7898:HG4_Ill_SVrefine2DISCOVARDovetail_11207:HG3_Ill_SVrefine2DISCOVARDovetail_11388:HG2_PB_SVrefine2PBcRplusDovetail_3890:HG2_PB_SVrefine2PB10Xhap12_11529:HG2_PB_SVrefine2Falcon2Bionano_7853:HG2_Ill_SVrefine2DISCOVARplusDovetail_4573;NumClusterSVs=39;ExactMatchIDs=HG2_10X_allpass_2482:HG2_Ill_150bpfermikitraw_19903:HG2_Ill_250bpfermikitraw_21091:HG2_Ill_GATKHCSBGrefine_10514:HG2_Ill_GATKHC_25330:HG2_Ill_SVrefine2DISCOVARplusDovetail_4574:HG2_Ill_svaba_19779:HG2_PB_SVrefine2Falcon1plusDovetail_4143:HG2_PB_assemblyticsfalcon_9572:HG3_Ill_GATKHCSBGrefine_10435:HG3_Ill_manta_3548:HG3_Ill_svaba_19936:HG4_10X_allpass_2898:HG4_Ill_150bpfermikitraw_19998:HG4_Ill_250bpfermikitraw_20765:HG4_Ill_GATKHCSBGrefine_10869:HG4_Ill_GATKHC_25238:HG4_Ill_manta_3692:HG4_Ill_svaba_19745;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0125;ClusterMaxSizeDiff=0.0125;ClusterMaxEditDist=0.0373832;PBcalls=12;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=6;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-159;DistBack=-49;DistForward=6370;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=109;REFWIDENED=16:18967469-18967736;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:1:11:0:6:1/1:0:6:0:11:1/1:0:42:./.:.:.:.:.:.
chr16	19230429	HG3_Ill_GATKHCSBGrefine_10436	AAATAATAAAACAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAATAATAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11019:HG2_10X_allpass_2483:HG3_Ill_Krunchall_21051:HG2_Ill_Krunchall_21446:HG3_PB_assemblyticsfalcon_9562:HG2_PB_assemblyticsfalcon_9573:HG4_PB_assemblyticsfalcon_9409:HG2_PB_assemblyticsPBcR_9240:HG4_Ill_Spiral_1238:HG3_Ill_Spiral_16391:HG2_Ill_Spiral_1049:HG2_PB_pbsv_15955:HG4_PB_pbsv_15863:HG3_PB_HySA_24065:HG4_Ill_manta_3693:HG4_Ill_GATKHCSBGrefine_10870:HG4_10X_allpass_2899:HG3_PB_pbsv_15611:HG3_Ill_scalpel_15253:HG3_Ill_MetaSV_1876:HG3_Ill_GATKHCSBGrefine_10436:HG3_10X_allpass_3048:HG2_Ill_scalpel_15000:HG2_Ill_manta_4355:HG2_Ill_GATKHCSBGrefine_10515:HG4_Ill_MetaSV_1821:HG2_PB_HySA_29028:HG2_Ill_tnscope_1718:HG2_Ill_MetaSV_1769:HG3_Ill_SVrefine2DISCOVARDovetail_11390:HG2_PB_SVrefine2PBcRplusDovetail_3891:HG2_PB_SVrefine2PB10Xhap12_11530:HG2_PB_SVrefine2Falcon2Bionano_7854:HG2_PB_SVrefine2Falcon1plusDovetail_4144:HG2_Ill_breakscan11_2288:HG2_Ill_SVrefine2DISCOVARplusDovetail_4576;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10515:HG2_Ill_manta_4355:HG2_Ill_scalpel_15000:HG3_10X_allpass_3048:HG3_Ill_GATKHCSBGrefine_10436:HG3_Ill_MetaSV_1876:HG3_Ill_scalpel_15253:HG3_PB_pbsv_15611:HG4_10X_allpass_2899:HG4_Ill_GATKHCSBGrefine_10870:HG4_Ill_manta_3693;NumExactMatchSVs=11;ClusterMaxShiftDist=0.101597;ClusterMaxSizeDiff=0.101597;ClusterMaxEditDist=0.104499;PBcalls=13;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-352;DistBack=9795;DistForward=-343;DistMin=-343;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=16:19230426-19230794;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1328.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:91:1/1:1:34:0:36:./.:1:16:0:7:1/1:0:39:0/1:2:9:.:.:.
chr16	19506316	HG2_PB_SVrefine2Falcon1plusDovetail_4147	ATACTTCAGTGTCTATTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCGCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2289:HG4_Ill_Krunchall_21781:HG3_Ill_Krunchall_21055:HG2_Ill_Krunchall_21456:HG4_PB_assemblyticsfalcon_9414:HG2_PB_assemblyticsPBcR_9247:HG2_PB_assemblyticsfalcon_9578:HG2_PB_HySA_29034:HG2_Ill_Spiral_1051:HG4_PB_pbsv_15867:HG2_PB_pbsv_15958:HG4_PB_HySA_23174:HG4_Ill_MetaSV_1823:HG3_Ill_MetaSV_1878:HG2_Ill_tnscope_1719:HG2_Ill_MetaSV_1770:HG4_PB_SVrefine2PBcRDovetail_7902:HG4_Ill_svaba_19752:HG4_Ill_scalpel_14596:HG4_Ill_manta_3695:HG4_Ill_SVrefine2DISCOVARDovetail_11211:HG4_Ill_GATKHCSBGrefine_10875:HG4_10X_allpass_2901:HG3_PB_pbsv_15614:HG3_PB_assemblyticsfalcon_9566:HG3_Ill_svaba_19941:HG3_Ill_scalpel_15257:HG3_Ill_manta_3549:HG3_Ill_SVrefine2DISCOVARDovetail_11394:HG3_Ill_GATKHCSBGrefine_10440:HG3_10X_allpass_3049:HG2_PB_SVrefine2PBcRplusDovetail_3894:HG2_PB_SVrefine2PB10Xhap12_11533:HG2_PB_SVrefine2Falcon2Bionano_7857:HG2_PB_SVrefine2Falcon1plusDovetail_4147:HG2_Ill_svaba_19784:HG2_Ill_scalpel_15005:HG2_Ill_manta_4356:HG2_Ill_SpiralSDKrefine_5992:HG2_Ill_SVrefine2DISCOVARplusDovetail_4583:HG2_Ill_GATKHCSBGrefine_10518:HG2_10X_allpass_2484:HG2_10X_SVrefine210Xhap12_11022;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11022:HG2_10X_allpass_2484:HG2_Ill_GATKHCSBGrefine_10518:HG2_Ill_SVrefine2DISCOVARplusDovetail_4583:HG2_Ill_SpiralSDKrefine_5992:HG2_Ill_manta_4356:HG2_Ill_scalpel_15005:HG2_Ill_svaba_19784:HG2_PB_SVrefine2Falcon1plusDovetail_4147:HG2_PB_SVrefine2Falcon2Bionano_7857:HG2_PB_SVrefine2PB10Xhap12_11533:HG2_PB_SVrefine2PBcRplusDovetail_3894:HG3_10X_allpass_3049:HG3_Ill_GATKHCSBGrefine_10440:HG3_Ill_SVrefine2DISCOVARDovetail_11394:HG3_Ill_manta_3549:HG3_Ill_scalpel_15257:HG3_Ill_svaba_19941:HG3_PB_assemblyticsfalcon_9566:HG3_PB_pbsv_15614:HG4_10X_allpass_2901:HG4_Ill_GATKHCSBGrefine_10875:HG4_Ill_SVrefine2DISCOVARDovetail_11211:HG4_Ill_manta_3695:HG4_Ill_scalpel_14596:HG4_Ill_svaba_19752:HG4_PB_SVrefine2PBcRDovetail_7902;NumExactMatchSVs=27;ClusterMaxShiftDist=0.11878;ClusterMaxSizeDiff=0.11878;ClusterMaxEditDist=0.11878;PBcalls=14;Illcalls=25;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=1528;DistForward=-301;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=16:19506317-19506654;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:54:1/1:1:13:0:23:1/1:0:12:0:15:1/1:0:48:0/1:2:9:.:.:.
chr16	20778541	HG2_Ill_GATKHCSBGrefine_10526	CAAAAAACAGGGACCGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2290:HG4_10X_allpass_2902:HG2_10X_allpass_2485:HG4_PB_assemblyticsfalcon_9421:HG3_PB_assemblyticsfalcon_9574:HG2_PB_assemblyticsfalcon_9583:HG2_PB_assemblyticsPBcR_9254:HG3_Ill_Spiral_16402:HG2_PB_HySA_29047:HG2_Ill_Spiral_1052:HG2_PB_pbsv_15968:HG4_Ill_MetaSV_1824:HG3_PB_pbsv_15623:HG3_Ill_MetaSV_1879:HG2_Ill_tnscope_1720:HG2_Ill_MetaSV_1771:HG4_Ill_manta_3699:HG4_Ill_GATKHCSBGrefine_10881:HG3_PB_HySA_24075:HG3_Ill_scalpel_15262:HG3_Ill_manta_3553:HG3_Ill_SVrefine2DISCOVARDovetail_11400:HG3_Ill_GATKHCSBGrefine_10447:HG3_10X_allpass_3050:HG2_PB_SVrefine2PBcRplusDovetail_3897:HG2_PB_SVrefine2PB10Xhap12_11540:HG2_PB_SVrefine2Falcon2Bionano_7862:HG2_PB_SVrefine2Falcon1plusDovetail_4150:HG2_Ill_scalpel_15009:HG2_Ill_manta_4360:HG2_Ill_SVrefine2DISCOVARplusDovetail_4588:HG2_Ill_GATKHCSBGrefine_10526:HG2_10X_SVrefine210Xhap12_11026:HG4_PB_pbsv_15876;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11026:HG2_Ill_GATKHCSBGrefine_10526:HG2_Ill_SVrefine2DISCOVARplusDovetail_4588:HG2_Ill_manta_4360:HG2_Ill_scalpel_15009:HG2_PB_SVrefine2Falcon1plusDovetail_4150:HG2_PB_SVrefine2Falcon2Bionano_7862:HG2_PB_SVrefine2PB10Xhap12_11540:HG2_PB_SVrefine2PBcRplusDovetail_3897:HG3_10X_allpass_3050:HG3_Ill_GATKHCSBGrefine_10447:HG3_Ill_SVrefine2DISCOVARDovetail_11400:HG3_Ill_manta_3553:HG3_Ill_scalpel_15262:HG3_PB_HySA_24075:HG4_Ill_GATKHCSBGrefine_10881:HG4_Ill_manta_3699;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0987261;ClusterMaxSizeDiff=0.0987261;ClusterMaxEditDist=0.0987261;PBcalls=13;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=19078;DistForward=-305;DistMin=-305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=16:20778542-20778877;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1330.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:67:1/1:0:28:2:29:1/1:0:21:0:24:1/1:0:35:./.:2:11:.:.:.
chr16	22707171	HG4_PB_SVrefine2Falcon1Dovetail_9697	TAGTCCCAGCTACTTAGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGATATGGAGGATGCAGTGAGCTGTGACTGCACCACTGCACTACAGCCTGGGCAACAGAGCGAGATCCTGTATCAA	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4155:HG4_PB_pbsv_15879:HG3_PB_pbsv_15627:HG2_PB_pbsv_15971:HG4_PB_SVrefine2Falcon1Dovetail_9697:HG3_PB_SVrefine2PBcRDovetail_7535:HG3_PB_SVrefine2Falcon1Dovetail_9691;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4155:HG4_PB_SVrefine2Falcon1Dovetail_9697:HG3_PB_SVrefine2PBcRDovetail_7535:HG3_PB_SVrefine2Falcon1Dovetail_9691;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00813008;ClusterMaxSizeDiff=0.00809717;ClusterMaxEditDist=0.0162602;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-123;DistBack=7826;DistForward=-124;DistMin=-124;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=124;REFWIDENED=16:22707172-22707418;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:94:46:./.:42:28:41:15:./.:0:2:12:0:0/1:83:19:./.:.:.:.:.:.
chr16	22908974	HG3_PB_SVrefine2Falcon1Dovetail_9693	CTTTGCCTTGCCTAACTTTAATGAGACTCGTAGCCTGGAGTTTACGGGGACAGGTACTAGAGTCAAAACACTTGAATTTGTATCTTAGCTTCGCTATTCAGTACCTTGGGTCTTTGGGCGGGTTACTTCTCTGCCTAATTCCCTCAAATTATAATAAGGTTAAAATAAGGCTATAAAGTTAATAGTAATAGCTCCTTGATGATATTCTGTGGTATTTATATGAGATAATACATGTAAAAGCTCATATAGCTATGCCTACCACAAGGCATGTAAAAATG	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1774:HG4_Ill_GATKHCSBGrefine_10887:HG3_Ill_GATKHCSBGrefine_10453:HG2_Ill_GATKHCSBGrefine_10528:HG2_Ill_SpiralSDKrefine_6009:HG2_Ill_breakscan11_2291:HG4_PB_assemblyticsfalcon_9432:HG4_PB_SVrefine2Falcon1Dovetail_9699:HG4_Ill_manta_3700:HG3_PB_SVrefine2Falcon1Dovetail_9693:HG3_Ill_manta_3556:HG2_PB_SVrefine2Falcon1plusDovetail_4158:HG2_Ill_SVrefine2DISCOVARplusDovetail_4597:HG4_Ill_Spiral_1241:HG3_Ill_Spiral_16410:HG2_Ill_Spiral_1053:HG3_PB_assemblyticsfalcon_9585:HG2_PB_assemblyticsfalcon_9596:HG4_Ill_MetaSV_1828:HG4_PB_pbsv_15884:HG4_Ill_scalpel_14604:HG4_10X_allpass_2903:HG3_PB_pbsv_15632:HG3_Ill_scalpel_15271:HG3_10X_allpass_3051:HG3_Ill_Krunchall_21072:HG2_PB_pbsv_15974:HG2_Ill_Krunchall_21474:HG3_Ill_MetaSV_1881:HG4_Ill_MetaSV_1827;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4597:HG2_PB_SVrefine2Falcon1plusDovetail_4158:HG3_Ill_manta_3556:HG3_PB_SVrefine2Falcon1Dovetail_9693:HG4_Ill_manta_3700:HG4_PB_SVrefine2Falcon1Dovetail_9699:HG4_PB_assemblyticsfalcon_9432;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0797101;ClusterMaxSizeDiff=0.0797101;ClusterMaxEditDist=0.0797101;PBcalls=9;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-277;DistBack=-80;DistForward=-44;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=16:22908974-22909251;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9892;SizeDiff=0;StartDistance=3;EndDistance=3;GTMatch=0;TruScore=99;MatchId=1332.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:26:0|1:33:0:1:25:0|1:55:0:0:59:0/1:58:19:./.:.:.:.:.:.
chr16	23047776	HG2_10X_SVrefine210Xhap12_11034	AGGCTTATGCAAAAACATTACTTTTTTTTTTTGAGATATTTCGGTCCCTGAATGTGCTGGACAGGGGATGAAGTGAGACCCTTCTCCAGCAACATTTGGAGGAGGATGCAACTCAATCATCCTTGTGGCTGGGAGCCTTCATCTGCCATGGTCAAACAAACTTTAGATTTGCAAGGCCAAGGAAATGGTTGAAATGCAACATAAAACTGCACTATTTATATTTTCATTTCTATTAGACCTGTATAATGATGCCTTATTGAACTGAAGCTTAAATGGCTCAAGACTGATCGTAATAGAACATTTAATTGTTTGCTTGTCTAACTCTCTCAGCCCTAATTAAATATTGTTTTTCATTGAGTGGGTTATACAATGATGTTTCTTTGCTGTCACTGAAGAGAGAAGGGGACTGAGGCAGAATTTAGATGAGCCAGGCTCACTTTGTGCACTCCTCCTATTCTGTTTTTTGGTCCAACAATGGGAAGCAGAGCCCTCTGGGGGGAGACTTACCCTGATCCAGGGAACAGCTTTTGGAGATGATCTCATGCAAGTCCTCAGAGAGGAAGAGGAGTTATGAGAGATCATGTTATCTTGTGTGGTTTCCTATAGAAGGCACAGGTTCTTGATGTTCAAAGTTGGCATTGGCATCTTTCTAACTCCTCTTTCTCCCTAACACCCATCCCCACAGCACTGCCTTTGGTATCCCTGGAATCTAGCCACTTCTCATCACCTCTGTGCCATCATCCAGGGCCAAGCCACTATCACCTCTCATCTAGGTCATTGCAGAAGCCTCTTAACTGGCTGCCTGCACTTATCTGGGCTTTACCGCAGTCTGTTCCCAACCTATCAACCACTGGAAGGCCCTGTCCCTCCCCATCTCAGAACCTTTCTGTAGCTCCCAGCTCGCTCAGAAAAAAGCCAAGTTTCCATCTGACAATGCCCTCCATCCTGATATTACCTATGACTACAGCTCCAATGACACTGCCCTTCACTCATTCAGCTCCATCTAAACTGAGCTCTTTGCTGTTTTCTCGAATAGTCTTCACAATGCTTCCTCTTTAGGGCTTTTCATTTGTTGTTACCACTACCTATAATATGTCTCCCTCAGAAATCTGCACAGCTCACTCATTCACATTCTTTGTGCCTTTATTCGAATGTCACCTGTCAGGGAGGCCTCTAACTGCCCTATTTAAAATTGCAACCAACTCACCCTCTCTATCCTTCATCCATATTTTTCTCTATGGATCTTACTACTATTTGACATATATTTCAGTTGACCTATTTATTGCGTTTATTGTGTATCTCCCCTTCCAAAATGTGAGCCCTAGGAGGGCAAGGATTTTTCCCTCTTGCTTTCACTTCTGAATCCCCAGTGTCTAGAAAAACACCCAGAACAAAGTAGCTGCACAAATAAATATTTTTGAGCGAATGAATGAGTAAACAAATAAATGTAAACATGCACAAATGAATGAATAGTCTGTCATTTCTTTCTGGCCATGAATTCCAATGGTCAAGATCTACTCTAGGCCAGGAGCCTGGATGTATTTGTACCTTGCATTCTAGGATTCTGGGCATTCAAGAGGAAATCTTCCCATTGGAGATGGAGCTGCAAAGGGCAAACTGAGATCCAGAGCTCAGAATTGCCCCAGCCTTCCTGCTGCAAATGCTAATTCTTCTAAGACTAAGGCAAAATGGTGAAAGAGGTGGGAGCTTGAGCCTGAGCTCAGAAACAGGCTCTGATTTACAGCAAGAGAAGAGG	GATTCT	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_7907:HG4_PB_pbsv_15885:HG2_PB_pbsv_15975:HG2_Ill_SpiralSDKrefine_6011:HG4_10X_allpass_2904:HG2_Ill_tnscope_1721:HG4_PB_assemblyticsfalcon_9434:HG4_PB_SVrefine2Falcon1Dovetail_9700:HG4_Ill_Cortex_1281:HG3_PB_SVrefine2PBcRDovetail_7537:HG3_PB_SVrefine2Falcon1Dovetail_9694:HG3_Ill_Cortex_1336:HG2_PB_SVrefine2Falcon1plusDovetail_4159:HG2_Ill_SVrefine2DISCOVARplusDovetail_4598:HG2_Ill_Cortex_3126:HG2_10X_SVrefine210Xhap12_11034:HG3_Ill_MetaSV_1882:HG3_10X_allpass_3052:HG2_Ill_MetaSV_1775:HG3_PB_pbsv_15633:HG3_Ill_GATKHCSBGrefine_10454:HG3_PB_assemblyticsfalcon_9587:HG2_PB_assemblyticsfalcon_9598:HG4_Ill_MetaSV_1829:HG2_10X_allpass_2487:HG4_Ill_Krunchall_21800:HG3_Ill_Krunchall_21076:HG2_Ill_Krunchall_21476;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11034:HG2_Ill_Cortex_3126:HG2_Ill_SVrefine2DISCOVARplusDovetail_4598:HG2_PB_SVrefine2Falcon1plusDovetail_4159:HG3_Ill_Cortex_1336:HG3_PB_SVrefine2Falcon1Dovetail_9694:HG3_PB_SVrefine2PBcRDovetail_7537:HG4_Ill_Cortex_1281:HG4_PB_SVrefine2Falcon1Dovetail_9700:HG4_PB_assemblyticsfalcon_9434;NumExactMatchSVs=10;ClusterMaxShiftDist=0.119233;ClusterMaxSizeDiff=0.119233;ClusterMaxEditDist=0.119233;PBcalls=11;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1750;DistBack=0;DistForward=-191;DistMin=-191;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=16:23047776-23049531;PctSeqSimilarity=0.9989;PctSizeSimilarity=0.9994;PctRecOverlap=0.9977;SizeDiff=-1;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1333.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:63:0|1:42:0:0:40:0|1:44:0:0:28:0/1:51:15:0/1:182:72:1459:.:.
chr16	23264792	HG3_Ill_svaba_19966	ATGTTACATTAATATATTAATTATATTGTTACATTAATATTAATTATATTGTTACATTAATATATTAATTATATTGTTACATTAATATTATATTAATTATAT	A	20	PASS	ClusterIDs=HG2_Ill_svaba_19806:HG4_PB_pbsv_15886:HG3_PB_SVrefine2Falcon1Dovetail_9695:HG2_10X_SVrefine210Xhap12_11035:HG2_PB_SVrefine2Falcon1plusDovetail_4160:HG3_PB_assemblyticsfalcon_9589:HG2_PB_assemblyticsfalcon_9599:HG3_PB_pbsv_15634:HG2_PB_pbsv_15976:HG4_Ill_svaba_19771:HG3_Ill_svaba_19966:HG3_Ill_250bpfermikitraw_20529:HG3_Ill_150bpfermikitraw_19982;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_svaba_19806:HG4_Ill_svaba_19771:HG3_Ill_svaba_19966:HG3_Ill_250bpfermikitraw_20529:HG3_Ill_150bpfermikitraw_19982;NumExactMatchSVs=5;ClusterMaxShiftDist=0.112676;ClusterMaxSizeDiff=0.038835;ClusterMaxEditDist=0.225352;PBcalls=7;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=-101;DistBack=-74;DistForward=-71;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=689;REFWIDENED=16:23264308-23265097;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1334.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:40:0|1:26:5:3:23:0|1:26:0:1:6:0/1:22:16:./.:.:.:.:.:.
chr16	23528535	HG2_PB_SVrefine2Falcon2Bionano_7865	GCCCAGCTAATTTTTTTCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCTGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2292:HG4_Ill_Krunchall_21808:HG3_Ill_Krunchall_21080:HG2_PB_assemblyticsfalcon_9602:HG2_PB_assemblyticsPBcR_9273:HG4_PB_HySA_23208:HG2_PB_pbsv_15978:HG2_PB_HySA_29077:HG4_Ill_MetaSV_1830:HG3_PB_HySA_24095:HG3_Ill_MetaSV_1883:HG2_Ill_tnscope_1722:HG4_PB_pbsv_15888:HG4_PB_assemblyticsfalcon_9442:HG4_PB_SVrefine2Falcon1Dovetail_9702:HG4_Ill_scalpel_14608:HG4_Ill_manta_3701:HG4_Ill_GATKHCSBGrefine_10889:HG4_10X_allpass_2905:HG3_PB_pbsv_15635:HG3_PB_assemblyticsfalcon_9594:HG3_PB_SVrefine2PBcRDovetail_7538:HG3_PB_SVrefine2Falcon1Dovetail_9696:HG3_Ill_scalpel_15278:HG3_Ill_manta_3557:HG3_Ill_GATKHCSBGrefine_10458:HG3_10X_allpass_3053:HG2_PB_SVrefine2PBcRplusDovetail_3903:HG2_PB_SVrefine2PB10Xhap12_11545:HG2_PB_SVrefine2Falcon2Bionano_7865:HG2_PB_SVrefine2Falcon1plusDovetail_4161:HG2_Ill_scalpel_15017:HG2_Ill_manta_4362:HG2_Ill_SVrefine2DISCOVARplusDovetail_4600:HG2_Ill_MetaSV_1776:HG2_Ill_GATKHCSBGrefine_10531:HG2_10X_allpass_2488:HG2_10X_SVrefine210Xhap12_11039;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11039:HG2_10X_allpass_2488:HG2_Ill_GATKHCSBGrefine_10531:HG2_Ill_MetaSV_1776:HG2_Ill_SVrefine2DISCOVARplusDovetail_4600:HG2_Ill_manta_4362:HG2_Ill_scalpel_15017:HG2_PB_SVrefine2Falcon1plusDovetail_4161:HG2_PB_SVrefine2Falcon2Bionano_7865:HG2_PB_SVrefine2PB10Xhap12_11545:HG2_PB_SVrefine2PBcRplusDovetail_3903:HG3_10X_allpass_3053:HG3_Ill_GATKHCSBGrefine_10458:HG3_Ill_manta_3557:HG3_Ill_scalpel_15278:HG3_PB_SVrefine2Falcon1Dovetail_9696:HG3_PB_SVrefine2PBcRDovetail_7538:HG3_PB_assemblyticsfalcon_9594:HG3_PB_pbsv_15635:HG4_10X_allpass_2905:HG4_Ill_GATKHCSBGrefine_10889:HG4_Ill_manta_3701:HG4_Ill_scalpel_14608:HG4_PB_SVrefine2Falcon1Dovetail_9702:HG4_PB_assemblyticsfalcon_9442:HG4_PB_pbsv_15888;NumExactMatchSVs=26;ClusterMaxShiftDist=0.00636943;ClusterMaxSizeDiff=0.00636943;ClusterMaxEditDist=0.00958466;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=6197;DistForward=66727;DistMin=6197;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=16:23528536-23528866;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:./.:0:0:0:3:1/1:0:13:0:15:1/1:0:46:./.:2:19:.:.:.
chr16	23760312	HG2_PB_SVrefine2Falcon2Bionano_7866	CTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCTTTCTTTCACACGGGAAAGGGTCTAGCTCTGTCACCCAGGCTGGAGTGCAGTGCTGCGATCTCGGCTCACTGCAACTTCCACCTCCGGGGCTCAAGAATTCTCCCGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCTGTGCACCATCATGCCCAGCTAATTTTTGTATTTTTTGTAGAGATAGAGTTTTGCCATGTTGCCTGGGCTGGTCTTGAACTCCTGGGCTCAAGTGATCCACCTGCCTCAGCCTCCCAAAGTGCCGCGATTACAGGTGTGAGCCACTACACAAGGCCTCTTGTCTCTGTGTGTGTGTGTGTGTTTTTTAATTGAGATGGAATCTCACTCTGTTTCCCAGGCTGGGGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCTTCCTGAGTAGCTGGGATTACACACACCCACAACCACACCTGGCTAGTTGTTATATTTTTAGTACAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCATGATCCACCTGCATCGGCCTCCCAAAGTTCTGGATTACCACGCCTGGCCCTTTATTCCTGTTTCTTACCTCTCTATTCCTGGTAGAGGAATTTGTATTTCCCTGATGACTAATGATGTTGATGTCACCCACCCTCATTACTTTTCGTCCCAGAGCTTTCCTGGCTATTCTGTTTTTAATTTTTATTTTTTTGTTTACTTTTTTCTTTCAAATTTTTTTTTTGTTTTATAGTTTGTTTTTAAGAAGACAAAAAAAGATCCCTCTGTAGGTTCAGCTACAGAAATCTTGTTACAACTTTTATTTCCTCTGGAGAGTCAAGTTTGACTGTCTTCTCTGTGCTGTTTTCTTTTAAAAAAGTTTTAATGAGATATAATTCACATACCACACAATTTGCCCATTTAAAGCATGCAATGCAATAGATTTTATTACATTCACAGATATGTGCAACCAAACTATCACCAGAGTCGATTGTAGAACATTTTCATCACCTCAACAAGAAACCCTGGGACCAGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAAGCAGAGGCGGGTGGATCGCTTGAGCCCAGGACAGCCTGGGGAACATAGTGAGATCCCATCTCTACAAGAAAACAAACAACAACAACAACAAAAAATTAGCCAGTTGAGATGGCATGTGCCTATAGTCCTAGCTACTAAGGAGGCTGAGGTGGGAGGATCATCTTAGCCCAGGAAGTTGAGGCTGTGGTGAGCCATGATCACTCCACTGCACTGCATCCTGGGTGATAGGAGACCCTGTCTTAAGAAAAAAAAGAAAAAATAAGAAACCCTGTACACTTTAGCTATTATCCCTGACTCCCACCTACCTCCCTTAGCCCTCGGCAATCACTAACCTACTTTTTGTCTCTACGGGTTTGCCTATTCTTAACATTTCATGTAAGTGCAATCATATAATACGTGGTCTTTTGTGACTGGTTTATTTTACTTAGCATAGAGTTTTCAAGGTTCATCCATTTTGTGGCATATATAATACTTCATTACTTTTTATGGCCAAATGATATTCCGTTGTATCAATATACCATGTTTTACTTATCCATTCATCAGTCAAACATTTGGCTTATTTCCAATTTTTGGCTGTTATGAATAGTGTCGCTATGAATATTCACTACAGGTTTTTGTTTGAGCTCCTAT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4602:HG2_10X_allpass_2489:HG2_PB_assemblyticsfalcon_9611:HG3_PB_assemblyticsfalcon_9597:HG3_Ill_MetaSV_1884:HG3_10X_allpass_3054:HG3_PB_HySA_24097:HG2_PB_HySA_29084:HG3_PB_pbsv_15636:HG2_PB_SVrefine2PB10Xhap12_11546:HG2_PB_pbsv_15979:HG3_PB_SVrefine2PBcRDovetail_7539:HG2_PB_SVrefine2Falcon2Bionano_7866:HG2_PB_SVrefine2Falcon1plusDovetail_4163;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4602:HG3_PB_SVrefine2PBcRDovetail_7539:HG2_PB_SVrefine2Falcon2Bionano_7866:HG2_PB_SVrefine2Falcon1plusDovetail_4163;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0873339;ClusterMaxSizeDiff=0.0873339;ClusterMaxEditDist=0.0873339;PBcalls=10;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-1878;DistBack=-47;DistForward=-1870;DistMin=-1870;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=74;REFWIDENED=16:23760307-23762260;PctSeqSimilarity=0.9673;PctSizeSimilarity=0.9973;PctRecOverlap=0.9585;SizeDiff=5;StartDistance=-78;EndDistance=-73;GTMatch=0;TruScore=97;MatchId=1336.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:25:0|1:17:2:1:11:./.:52:2:4:19:0/1:52:20:0/1:163:61:.:.:.
chr16	23910886	HG4_Ill_manta_3702	AATTACTTTTGTTCATTTGTAATTACTTATCCATAAGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGGTTTGTTGTCACCTGGGCTGGAGTGCAGTGATGCGACCATGGCTCACTATATTCAAAATCCTGGGCTCATGCGATCCTCCCACCTCAGCCTTCTGAGGAGCTGGGACCGTAGGCACGTGCCACCAGGCCCAGCAAATAAAATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGTAG	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_9621:HG4_PB_HySA_23220:HG4_PB_pbsv_15894:HG4_Ill_scalpel_14620:HG4_Ill_manta_3702:HG4_Ill_GATKHCSBGrefine_10891:HG4_10X_allpass_2907:HG3_PB_pbsv_15640:HG3_Ill_manta_3558:HG3_Ill_GATKHCSBGrefine_10460:HG3_10X_allpass_3055:HG2_Ill_scalpel_15024:HG2_Ill_breakscan11_2293:HG2_Ill_SpiralSDKrefine_6019:HG2_Ill_MetaSV_1777:HG2_Ill_GATKHCSBGrefine_10532:HG4_PB_assemblyticsfalcon_9451:HG3_PB_assemblyticsfalcon_9605:HG2_PB_assemblyticsPBcR_9286:HG4_Ill_Spiral_1242:HG4_Ill_MetaSV_1831:HG3_Ill_Spiral_16422:HG3_Ill_MetaSV_1885:HG2_Ill_Spiral_1054:HG4_Ill_Krunchall_21822:HG2_Ill_Krunchall_21493:HG4_PB_SVrefine2Falcon1Dovetail_9705:HG3_PB_SVrefine2Falcon1Dovetail_9699:HG2_PB_pbsv_15983:HG2_PB_SVrefine2PBcRplusDovetail_3905:HG2_PB_SVrefine2PB10Xhap12_11549:HG2_PB_SVrefine2Falcon2Bionano_7869:HG2_PB_HySA_29093:HG2_10X_SVrefine210Xhap12_11045:HG2_Ill_tnscope_1723:HG2_PB_SVrefine2Falcon1plusDovetail_4166;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10532:HG2_Ill_MetaSV_1777:HG2_Ill_SpiralSDKrefine_6019:HG2_Ill_breakscan11_2293:HG2_Ill_scalpel_15024:HG3_10X_allpass_3055:HG3_Ill_GATKHCSBGrefine_10460:HG3_Ill_manta_3558:HG3_PB_pbsv_15640:HG4_10X_allpass_2907:HG4_Ill_GATKHCSBGrefine_10891:HG4_Ill_manta_3702:HG4_Ill_scalpel_14620:HG4_PB_pbsv_15894;NumExactMatchSVs=14;ClusterMaxShiftDist=0.045977;ClusterMaxSizeDiff=0.045977;ClusterMaxEditDist=0.0591133;PBcalls=15;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=12475;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:23910887-23911193;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1337.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:29:0|1:41:1:0:23:1|0:0:25:42:0:0/1:52:13:0/1:21:11:.:.:.
chr16	25083488	HG2_Ill_SVrefine2DISCOVARplusDovetail_4614	TGCTCATTTCTGCCTTTCTGTTGTAATTGATGCCAATAGCTGCCAGTCCTAAAACGCATCCTGCAGTGCTTGCTTTCTTGCTTTAGGAAC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_9303:HG3_PB_pbsv_15648:HG4_PB_pbsv_15908:HG2_PB_pbsv_15991:HG4_PB_assemblyticsfalcon_9462:HG4_PB_SVrefine2Falcon1Dovetail_9712:HG4_Ill_250bpfermikitraw_20820:HG4_Ill_150bpfermikitraw_20054:HG3_PB_assemblyticsfalcon_9616:HG3_PB_SVrefine2PBcRDovetail_7547:HG3_PB_SVrefine2Falcon1Dovetail_9706:HG3_Ill_250bpfermikitraw_20547:HG3_Ill_150bpfermikitraw_20004:HG2_PB_SVrefine2PBcRplusDovetail_3913:HG2_PB_SVrefine2PB10Xhap12_11558:HG2_PB_SVrefine2Falcon2Bionano_7876:HG2_PB_SVrefine2Falcon1plusDovetail_4173:HG2_Ill_SVrefine2DISCOVARplusDovetail_4614:HG2_Ill_250bpfermikitraw_21136:HG2_Ill_150bpfermikitraw_19948:HG2_10X_SVrefine210Xhap12_11051;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11051:HG2_Ill_150bpfermikitraw_19948:HG2_Ill_250bpfermikitraw_21136:HG2_Ill_SVrefine2DISCOVARplusDovetail_4614:HG2_PB_SVrefine2Falcon1plusDovetail_4173:HG2_PB_SVrefine2Falcon2Bionano_7876:HG2_PB_SVrefine2PB10Xhap12_11558:HG2_PB_SVrefine2PBcRplusDovetail_3913:HG3_Ill_150bpfermikitraw_20004:HG3_Ill_250bpfermikitraw_20547:HG3_PB_SVrefine2Falcon1Dovetail_9706:HG3_PB_SVrefine2PBcRDovetail_7547:HG3_PB_assemblyticsfalcon_9616:HG4_Ill_150bpfermikitraw_20054:HG4_Ill_250bpfermikitraw_20820:HG4_PB_SVrefine2Falcon1Dovetail_9712:HG4_PB_assemblyticsfalcon_9462;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0227273;ClusterMaxSizeDiff=0.0224719;ClusterMaxEditDist=0.0454545;PBcalls=13;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-89;DistBack=120;DistForward=5299;DistMin=120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=515;REFWIDENED=16:25083189-25083792;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1338.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:70:1/1:1:26:1:25:./.:0:1:0:2:1/1:0:8:./.:.:.:.:.:.
chr16	25340109	HG2_PB_pbsv_15992	AGGGAATTGCTTTCTTTTCCCTGGGCATCAGCTCTGGTTTCCTTTCTCCACTCATCAGCATCTTCTGTTTATATGTTCTTTCTACTTGATATTAACCTTCACATACCCACATCGTGCTGGCTGCCCACATCACTTTCTTTCAGCTGCCTCAGTTTTGTAATTCCAAATTCAGGCAAATATCAGATTGGCTGATCCTAATTTTGTGAGCCAGGCTTACAAATTATTCATGACTGGCTAATCAATGGATGATGCATTGGACAGTGGAAGGGATCATGTGACTTGAATCTTGGCCGTGCTCTACAGGCATACATGCTACAGGAACCATGTGAGGTAGTTTCCCCTTGAAGTTATGGGGAGGGGAGATAATACAGGATTTTAACTTACTTTGGGAAGTAGAAGGCCAGGTCTTATTCTAAGGGTGATCAGAGAAGAGGAAGTTAAGAAAATTTATGCTATAGTTTGGATATTTGACCTTCATCCTCACGTTGAAATTTGATTCCCAGTGTTGGAAGTAGGCCTAGTGGAAGGTGTTTGGGTCATGGGGGTGGATACCTCATGAATAGATTAACTCCCTCCCTGAGTGGGAGTAACGAGCAAGTTCCACTGTATTAGTTCCCTTGGGAGCTGGTTGTTAAAAGGAGCCTGGCAAGTTGATCCCCTCTTGCTTTCTCTCTCATTATGGGATCTCTGCACATGCTAGTCCCCTTGGTCATCTACCATGAGTGGAAACTCCCTGAAACCCTCACCAGAAGCAGATGCAGGTGCCATGCTTCTTGTACAGCTTGTGGAATCATAAGCCAAACAAATCTCTTTTCTTTAGAAATTACCCAGCCTCAGGTATTTCTTTATAGCAACACGAACGGACTAATACAGTTCAGGAGACTACAGATCTGAAACAACTATGGAAAAAGAAACCCAGAAGATATTCACAACAGCATGAAGGGCTCAGATGAGTTTTGAGACCAGAATTTTGCAATTATTCCATTCTTTCTAATTATATGATTTCTTCCAGCAGAGCTCACAGCTAGTGAAGATGTGTGGGAGGCAATTACTGGATTCATCCAGGGCTGGCATTTTTCCAGGTAGGTGAGAAAGTCAGACATTGATACAAAAGATTAAAATATTAAAAAAGGAGCTAGGATGATTGTCAGCTGTTGCCAAAAAGAAATCTTAGAATTTAAGATCTCAGAGATGTGAGATTTCTTGTTGGATGGATGACTTTATGGTCTGGGGTGTGATCATGAGAGAAGATGGTCAAAGAAGAGTGGAGGTGAAGGCCACTGAGTTGAGCGGGCAAAAGATTTGAGAGGCATAGATAGTGAATGGGGTGCTGAAATGGATACTAAAGTCACTTGGGATAGTGGTAGTGCTTGGAACAGAGAGGAAAATGGTACACCAGGATATTTAGTAAAAAAAGAGAGTGGCTAGGAATGAGTGGGTAACTATAATGTAAAGGCATAAAGAGTTAAATCTAGAATCATTTTTGATCCTTCTTTCTTTCTTACTATCCATACCCAACAACTCAATAGATCTTATAAATTCCATCTCATAAGACTTTAATCTAACCCATCTATGTCTTCTATTTCCACTGGCATCACCCTAGTATAAGTCATACATTTCCTCCCACCTTTACTATTATGATAACCATCAATAAACACTTTTGAGACTTTCCAAGCCATTCTCTGCATTGTGATTTATAATTTGTGAAATTATGAATCTTATCACTGCTTAAGACTCTTCCATGGCTTCCCACTGCTCTTAGGATAAAACCTATGTGGGAAATTGTATCAGTGTTCAAAATATTTGATGCTCTTCCTGGATAAGGGTTCTACTTCCCTGTCTCACTAATGTTAATCATGGCCATGTGACTTGCAGGGACTCTCTATGCAGGAGGATTATATATTCCTACTCTGTTGAACACAAATGTAGCCACGTGGCTTGCTTTGGCTAATGGAATGTGGGCCAAAGTGATGTGTGTTATTTCTAAGCAGAAGCTTTAAGGGCCAGATATATGGCTTCTCTTTTCTCTCTTTTTCCTCTTTTATAAGACTAGCATTGGCCCAGATAAAGACTGATCCATCAGTCCTGAAGGCAACATGAAGACACGACCCACATGGACATATAACATGAATGGGAAATAAATCACTATTTTAAGATGTTGATATTTATTATTGTAGCAAAACTTAATACAGTCTGTAAGGCTCTGAGTGATTTAATGATTTGGTCCGACTTCTCCAGCCTTATCTCTCAAACATCTCCCCCTTTACATCACTTAATCTTATTTTTCTTCCAGATCCCAACTTAAATGTCACTTCCCCAGAAAAGCCTTTTCTAACTTCCCTTCTCCCTTGCAGCTCTGGACTAATTTAGATCACCTATTATTCTAGTTCATAACACCTTATTCTTTTTATTCATGTCACTCAAACACAGTCTGTAATTTTTTTTTTGTGAGTGTGATTATCTGTTTACCCCAGGAGAAGGTAAGTTCAGAGAGGGCAGACATTAGGTGGGTGTATTTCTTCATTATATTGCCGTGCCTGGTATACAATAAGCACTCAATTAAAATTTCTTCATCAAGTGGACAGATTTGAGTCCAGATTACAGGTGAGTCCAGAAGTCAGAGACAGTCTGATGCATCAAATATGAAGAGCTGGGGTGGAAAGCAAGAAATGGATCCAGTGCAAATGAAGACAGGTTGTGGATCAAAGGGAGTGGTGGTACGTGGAGAAATAATCAGATGCAAAAGTTTACAAAGGAGAGGTCACTTATAAGATGCCAGATGCCATTTCTACAGGCGGGGAGGTAGCTGTTCAGGGCAAAGAGCTGATGTGTACACTAAGCTACACCCAGCCCTTCCTCTCTCCTTTTCTCATTTTGTTTTTTCTCATTCCATCAACTTGTGGAGCATCTTCTGGATATTGGACTTTTTGGAGGATGCAGTAATAAATGAATTAATAGCTAGTTTCATGAGATTACCAAATGGAGAAGACAGATATGAACCTAGTAAGTCAGGCACAGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11054:HG2_10X_allpass_2491:HG4_10X_allpass_2909:HG3_PB_HySA_24116:HG2_PB_assemblyticsPBcR_9304:HG3_10X_allpass_3057:HG4_PB_pbsv_15909:HG4_Ill_Krunchall_21839:HG3_Ill_Krunchall_21103:HG2_Ill_Krunchall_21508:HG4_PB_assemblyticsfalcon_9464:HG3_PB_assemblyticsfalcon_9617:HG2_PB_assemblyticsfalcon_9639:HG2_Ill_tnscope_1724:HG4_PB_SVrefine2Falcon1Dovetail_9713:HG4_Ill_MetaSV_1834:HG3_PB_pbsv_15649:HG3_PB_SVrefine2PBcRDovetail_7548:HG3_PB_SVrefine2Falcon1Dovetail_9708:HG3_Ill_MetaSV_1886:HG3_Ill_GATKHCSBGrefine_10467:HG2_PB_pbsv_15992:HG2_PB_SVrefine2PBcRplusDovetail_3914:HG2_PB_SVrefine2PB10Xhap12_11559:HG2_PB_SVrefine2Falcon1plusDovetail_4174:HG2_Ill_SpiralSDKrefine_6026:HG2_Ill_MetaSV_1778;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11054:HG4_PB_SVrefine2Falcon1Dovetail_9713:HG4_Ill_MetaSV_1834:HG3_PB_pbsv_15649:HG3_PB_SVrefine2PBcRDovetail_7548:HG3_PB_SVrefine2Falcon1Dovetail_9708:HG3_Ill_MetaSV_1886:HG3_Ill_GATKHCSBGrefine_10467:HG2_PB_pbsv_15992:HG2_PB_SVrefine2PBcRplusDovetail_3914:HG2_PB_SVrefine2PB10Xhap12_11559:HG2_PB_SVrefine2Falcon1plusDovetail_4174:HG2_Ill_SpiralSDKrefine_6026:HG2_Ill_MetaSV_1778;NumExactMatchSVs=14;ClusterMaxShiftDist=0.00793913;ClusterMaxSizeDiff=0.00793913;ClusterMaxEditDist=0.00793913;PBcalls=14;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-3018;DistBack=16019;DistForward=-3016;DistMin=-3016;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=16:25340110-25343129;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:40:1|0:0:10:30:3:0|1:71:0:0:21:0/1:43:14:0/1:238:116:3062:.:.
chr16	25623554	HG4_10X_allpass_2910	TTACACAACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGCTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_15910:HG4_PB_HySA_23238:HG2_PB_assemblyticsfalcon_9641:HG4_Ill_Krunchall_21845:HG2_Ill_Krunchall_21512:HG2_Ill_Krunchall_21511:HG2_Ill_breakscan11_2295:HG4_PB_SVrefine2Falcon1Dovetail_9714:HG4_Ill_scalpel_14631:HG4_Ill_manta_3705:HG4_Ill_MetaSV_1835:HG4_Ill_Krunchall_21844:HG4_Ill_GATKHCSBGrefine_10898:HG4_10X_allpass_2910:HG3_PB_SVrefine2Falcon1Dovetail_9709:HG2_PB_pbsv_15993:HG2_PB_SVrefine2Falcon1plusDovetail_4175:HG2_Ill_scalpel_15030:HG2_Ill_manta_4363:HG2_Ill_SVrefine2DISCOVARplusDovetail_4620:HG2_Ill_MetaSV_1780:HG2_Ill_GATKHCSBGrefine_10541:HG2_10X_allpass_2492:HG2_10X_SVrefine210Xhap12_11057:HG2_Ill_tnscope_1725:HG2_Ill_MetaSV_1779;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11057:HG2_10X_allpass_2492:HG2_Ill_GATKHCSBGrefine_10541:HG2_Ill_MetaSV_1780:HG2_Ill_SVrefine2DISCOVARplusDovetail_4620:HG2_Ill_manta_4363:HG2_Ill_scalpel_15030:HG2_PB_SVrefine2Falcon1plusDovetail_4175:HG2_PB_pbsv_15993:HG3_PB_SVrefine2Falcon1Dovetail_9709:HG4_10X_allpass_2910:HG4_Ill_GATKHCSBGrefine_10898:HG4_Ill_Krunchall_21844:HG4_Ill_MetaSV_1835:HG4_Ill_manta_3705:HG4_Ill_scalpel_14631:HG4_PB_SVrefine2Falcon1Dovetail_9714;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0965058;ClusterMaxSizeDiff=0.0965058;ClusterMaxEditDist=0.096828;PBcalls=7;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=89043;DistForward=-290;DistMin=-290;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=16:25623555-25623876;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1340.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:23:0|1:47:0:0:21:1|0:0:21:31:0:0/1:21:20:0/1:21:7:.:.:.
chr16	25721774	HG3_Ill_manta_3561	ATTTTTACCTCTGCCATCTGACCATCCTTTTTGCCTTAGGGTCCTTCCCCATATCC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_15651:HG3_PB_HySA_24119:HG2_PB_HySA_29122:HG4_PB_HySA_23240:HG4_PB_pbsv_15911:HG4_PB_assemblyticsfalcon_9467:HG4_Ill_svaba_19804:HG4_Ill_scalpel_14633:HG4_Ill_manta_3706:HG4_Ill_Krunchall_21847:HG4_Ill_GATKHC_25319:HG4_Ill_GATKHCSBGrefine_10899:HG4_Ill_FB_13576:HG4_Ill_Cortex_1284:HG4_Ill_250bpfermikitraw_20829:HG4_Ill_150bpfermikitraw_20066:HG4_CG_vcfBeta_10053:HG3_PB_assemblyticsfalcon_9620:HG3_Ill_svaba_19995:HG3_Ill_scalpel_15294:HG3_Ill_manta_3561:HG3_Ill_Krunchall_21107:HG3_Ill_GATKHC_25236:HG3_Ill_GATKHCSBGrefine_10470:HG3_Ill_Cortex_1338:HG3_Ill_250bpfermikitraw_20560:HG3_Ill_150bpfermikitraw_20015:HG3_CG_vcfBeta_8561:HG2_PB_pbsv_15994:HG2_PB_assemblyticsfalcon_9643:HG2_Ill_svaba_19834:HG2_Ill_scalpel_15032:HG2_Ill_manta_4364:HG2_Ill_SpiralSDKrefine_6030:HG2_Ill_Krunchall_21514:HG2_Ill_GATKHC_25403:HG2_Ill_GATKHCSBGrefine_10542:HG2_Ill_Cortex_3140:HG2_Ill_250bpfermikitraw_21146:HG2_Ill_150bpfermikitraw_19960:HG2_CG_vcfBeta_9002:HG2_Ill_breakscan11_2296:HG2_PB_assemblyticsPBcR_9308;NumClusterSVs=43;ExactMatchIDs=HG2_CG_vcfBeta_9002:HG2_Ill_150bpfermikitraw_19960:HG2_Ill_250bpfermikitraw_21146:HG2_Ill_Cortex_3140:HG2_Ill_GATKHCSBGrefine_10542:HG2_Ill_GATKHC_25403:HG2_Ill_Krunchall_21514:HG2_Ill_SpiralSDKrefine_6030:HG2_Ill_manta_4364:HG2_Ill_scalpel_15032:HG2_Ill_svaba_19834:HG2_PB_assemblyticsfalcon_9643:HG2_PB_pbsv_15994:HG3_CG_vcfBeta_8561:HG3_Ill_150bpfermikitraw_20015:HG3_Ill_250bpfermikitraw_20560:HG3_Ill_Cortex_1338:HG3_Ill_GATKHCSBGrefine_10470:HG3_Ill_GATKHC_25236:HG3_Ill_Krunchall_21107:HG3_Ill_manta_3561:HG3_Ill_scalpel_15294:HG3_Ill_svaba_19995:HG3_PB_assemblyticsfalcon_9620:HG4_CG_vcfBeta_10053:HG4_Ill_150bpfermikitraw_20066:HG4_Ill_250bpfermikitraw_20829:HG4_Ill_Cortex_1284:HG4_Ill_FB_13576:HG4_Ill_GATKHCSBGrefine_10899:HG4_Ill_GATKHC_25319:HG4_Ill_Krunchall_21847:HG4_Ill_manta_3706:HG4_Ill_scalpel_14633:HG4_Ill_svaba_19804:HG4_PB_assemblyticsfalcon_9467:HG4_PB_pbsv_15911;NumExactMatchSVs=37;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.0540541;PBcalls=10;Illcalls=30;TenXcalls=0;CGcalls=3;PBexactcalls=5;Illexactcalls=29;TenXexactcalls=0;CGexactcalls=3;HG2count=16;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-55;DistBack=27819;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:25721773-25721831;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:70:1/1:0:22:1:26:1/1:0:37:0:41:1/1:0:52:./.:.:.:.:.:.
chr16	26383399	HG2_PB_SVrefine2Falcon1plusDovetail_4177	CAAAGCTGTAGGTAGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9715:HG3_PB_HySA_24125:HG2_10X_allpass_2493:HG3_Ill_Krunchall_21115:HG2_Ill_Krunchall_21526:HG3_Ill_Spiral_16441:HG2_PB_HySA_29132:HG3_PB_pbsv_15652:HG2_PB_pbsv_15997:HG2_Ill_tnscope_1726:HG2_Ill_MetaSV_1781:HG3_PB_SVrefine2PBcRDovetail_7549:HG3_PB_SVrefine2Falcon1Dovetail_9711:HG3_Ill_GATKHCSBGrefine_10471:HG3_10X_allpass_3058:HG2_PB_SVrefine2PBcRplusDovetail_3916:HG2_PB_SVrefine2PB10Xhap12_11563:HG2_PB_SVrefine2Falcon1plusDovetail_4177:HG2_Ill_breakscan11_2298:HG2_Ill_SVrefine2DISCOVARplusDovetail_4622:HG2_Ill_GATKHCSBGrefine_10544:HG2_10X_SVrefine210Xhap12_11060;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11060:HG2_Ill_GATKHCSBGrefine_10544:HG2_Ill_SVrefine2DISCOVARplusDovetail_4622:HG2_Ill_breakscan11_2298:HG2_PB_SVrefine2Falcon1plusDovetail_4177:HG2_PB_SVrefine2PB10Xhap12_11563:HG2_PB_SVrefine2PBcRplusDovetail_3916:HG3_10X_allpass_3058:HG3_Ill_GATKHCSBGrefine_10471:HG3_PB_SVrefine2Falcon1Dovetail_9711:HG3_PB_SVrefine2PBcRDovetail_7549;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0178571;ClusterMaxSizeDiff=0.0178571;ClusterMaxEditDist=0.0266272;PBcalls=10;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=-306;DistForward=-320;DistMin=-320;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=16:26383400-26383747;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1342.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:23:./.:13:17:9:1:0|1:31:0:0:12:0/1:24:20:0/1:29:5:.:.:.
chr16	26608023	HG2_Ill_manta_4366	TCCTCTTCACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1058:HG4_PB_assemblyticsfalcon_9476:HG4_PB_SVrefine2Falcon1Dovetail_9717:HG3_PB_assemblyticsfalcon_9627:HG3_PB_SVrefine2Falcon1Dovetail_9713:HG3_Ill_Spiral_16444:HG3_PB_pbsv_15654:HG2_PB_pbsv_15999:HG2_PB_SVrefine2PBcRplusDovetail_3918:HG2_PB_assemblyticsPBcR_9314:HG3_Ill_MetaSV_1888:HG2_Ill_tnscope_1728:HG2_Ill_MetaSV_1782:HG3_PB_SVrefine2PBcRDovetail_7551:HG3_Ill_scalpel_15304:HG3_Ill_manta_3563:HG3_Ill_GATKHCSBGrefine_10472:HG3_10X_allpass_3059:HG2_PB_SVrefine2PB10Xhap12_11565:HG2_PB_SVrefine2Falcon1plusDovetail_4179:HG2_PB_HySA_29135:HG2_Ill_scalpel_15041:HG2_Ill_manta_4366:HG2_Ill_SVrefine2DISCOVARplusDovetail_4623:HG2_Ill_GATKHCSBGrefine_10546:HG2_10X_SVrefine210Xhap12_11061:HG2_Ill_breakscan11_2299;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11061:HG2_Ill_GATKHCSBGrefine_10546:HG2_Ill_SVrefine2DISCOVARplusDovetail_4623:HG2_Ill_manta_4366:HG2_Ill_scalpel_15041:HG2_PB_HySA_29135:HG2_PB_SVrefine2Falcon1plusDovetail_4179:HG2_PB_SVrefine2PB10Xhap12_11565:HG3_10X_allpass_3059:HG3_Ill_GATKHCSBGrefine_10472:HG3_Ill_manta_3563:HG3_Ill_scalpel_15304:HG3_PB_SVrefine2PBcRDovetail_7551;NumExactMatchSVs=13;ClusterMaxShiftDist=0.020558;ClusterMaxSizeDiff=0.020558;ClusterMaxEditDist=0.0206186;PBcalls=12;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-342;DistBack=4353;DistForward=-328;DistMin=-328;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=16:26608024-26608379;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1343.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:45:0|1:29:3:1:40:0|1:27:0:0:16:0/1:29:18:0/1:35:5:.:.:0.998849
chr16	30181474	HG2_Ill_scalpel_15057	GGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGACGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTAAGGAGCCCCTCTGCCAGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11582:HG4_PB_pbsv_15937:HG2_PB_pbsv_16019:HG4_Ill_scalpel_14660:HG4_Ill_GATKHC_25368:HG4_Ill_GATKHCSBGrefine_10914:HG4_10X_allpass_2913:HG2_Ill_scalpel_15057:HG2_Ill_manta_4373:HG2_Ill_GATKHC_25442:HG2_Ill_GATKHCSBGrefine_10556;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10556:HG2_Ill_GATKHC_25442:HG2_Ill_manta_4373:HG2_Ill_scalpel_15057:HG4_10X_allpass_2913:HG4_Ill_GATKHCSBGrefine_10914:HG4_Ill_GATKHC_25368:HG4_Ill_scalpel_14660;NumExactMatchSVs=8;ClusterMaxShiftDist=0.015625;ClusterMaxSizeDiff=0.015625;ClusterMaxEditDist=0.015748;PBcalls=3;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-127;DistBack=315;DistForward=-86;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=83;REFWIDENED=16:30181433-30181642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1344.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:13:1|0:1:12:18:1:./.:0:3:3:0:0/1:21:21:./.:.:.:1676096:.:.
chr16	31327359	HG4_Ill_scalpel_14665	CAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCAGAGCTTGCAGTGAGTCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11082:HG3_PB_HySA_24191:HG4_PB_HySA_23331:HG2_PB_HySA_29211:HG2_Ill_MetaSV_1786:HG4_PB_assemblyticsfalcon_9511:HG4_PB_SVrefine2Falcon1Dovetail_9732:HG4_Ill_scalpel_14665:HG4_Ill_MetaSV_1843:HG4_Ill_GATKHCSBGrefine_10918:HG4_10X_allpass_2914:HG3_PB_pbsv_15681:HG3_Ill_scalpel_15337:HG3_Ill_GATKHCSBGrefine_10487:HG3_Ill_150bpfermikitraw_20071:HG3_10X_allpass_3064:HG2_PB_pbsv_16024:HG2_Ill_scalpel_15063:HG2_Ill_GATKHCSBGrefine_10560:HG4_Ill_Krunchall_21891:HG3_Ill_Krunchall_21153:HG2_Ill_Krunchall_21569:HG4_PB_pbsv_15943:HG4_PB_SVrefine2PBcRDovetail_7916:HG4_Ill_SVrefine2DISCOVARDovetail_11238:HG3_PB_SVrefine2Falcon1Dovetail_9731:HG3_Ill_SVrefine2DISCOVARDovetail_11416:HG2_PB_SVrefine2PBcRplusDovetail_3935:HG2_PB_SVrefine2PB10Xhap12_11590:HG2_PB_SVrefine2Falcon1plusDovetail_4202:HG2_Ill_SVrefine2DISCOVARplusDovetail_4643;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10560:HG2_Ill_scalpel_15063:HG2_PB_pbsv_16024:HG3_10X_allpass_3064:HG3_Ill_150bpfermikitraw_20071:HG3_Ill_GATKHCSBGrefine_10487:HG3_Ill_scalpel_15337:HG3_PB_pbsv_15681:HG4_10X_allpass_2914:HG4_Ill_GATKHCSBGrefine_10918:HG4_Ill_MetaSV_1843:HG4_Ill_scalpel_14665:HG4_PB_SVrefine2Falcon1Dovetail_9732:HG4_PB_assemblyticsfalcon_9511;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0155039;ClusterMaxSizeDiff=0.0155039;ClusterMaxEditDist=0.0206186;PBcalls=13;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-192;DistBack=-450;DistForward=-8;DistMin=-450;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=189;REFWIDENED=16:31327352-31327732;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:64:1/1:0:40:1:21:1/1:0:25:0:12:1/1:0:32:./.:.:.:1676096:.:.
chr16	32494596	HG4_PB_SVrefine2PBcRDovetail_7921	TGAGCTCATTGAGGCCAATGGTGAAAAATAAAATACCCCAGCATAAAAACTAGAAGGAAGCTATCTGAGAAACTGCTTTGTGATGTGTGCATTCATCTCACTGATTTAAACCCTTCTTTTATTCAGCAGTTTGGAAACACTGCTTTTGTTCTTCCTGTGAAAGGACATTTTGGAGCTCATTGGGGCCAATGGCAAAAAAGCGAATATCCCAGGATAAAAACAAGAGTGAAGCTGTCTGAGAAACCGCTTTTCGATGTGTGCATTCACCTGGCAGAGGTAAACTTTCCTTTTCAGTCAGCAGTTTGGGAATGCTGTTTTTGTAGAATCTGTGAAGGGATATTTGCGAGTGCATTGAGGCCTGTGGTGAAAAAGGAAATATCTTCAGATAAAAATTAGAAAGAAGTTTCCTGAGAAACTGCTTAAAGAGGTGTGCATTCCTCTCACAGGGTTAAACCTTTCCTTTGATTCAGCAGTTTGGAAACACTGTTTTTGTACATTCTGGGAATGGACATTAGGGAACTCACTGATGCCATTTGTGAAAAACTGTATACCCCAGGAAGAAAACTGGAAGGATATTATCTGAGAAACCCCTTTGTGAAGTCAGCATTCGTCTCTCAGAGTTAAATCTTTCTTTTCATTCAGGAGTTTGGAAACACTGTTTTTGTTGAATCTGCCAAGTAATATTAGGGTGTACGTTGAGGCCTAGGGTGAAAAAGAAAATATATTCAGATAAAAACGAAAAGAAGCTTTCTGAGAAACTGCTTTGTGATGTGTGCATTCATCTCACTGAGTGAAAACTTACTCTTGATTCAGCAGTTTGGAGACACTTTTTTGTGCATTCTGTGAATGGACATTTAGGAGCTCATTGAGTCCAAAGGTGAAAAAGTGAATATCTGAGGATAAAAACTACTACGAAGCTATTGTGAAACCGTTATGTGATGTCTGCATTTATCTCACGGAATTAAACCTTTCTTTTCATTCATCAGTTTGGAAACACTGTTTTTGTGGAAACTGCCAAGGAATATTAGGGAGTTCATTGAGGCTTAGGGTGAAAAAGAAAATATCTTCAAATAAAAACTAGAAAGATGGTTTCTGAGAAATTGCTTTGTTATATGTGCATTCATCTCACAGAGTTACACCTTTCTTTACCTTCAGCAGTTTGTAAACACTGTTGTTGTCCATTCTGACTACAGACATTTGGGAGGTCTTTGAGGCCAAAGGTGAAAAAGTGAACATAACAGGATAAAAATTAGGAGGAAGCTATCTGAGAAACTGCTCTGTGTTGTCTGCTTTTATCTCATAGAGTAAAACCTTTCTTTTCATTTGTCAGTTTTGAAATACGTTTTTCTGGAATCTGCCAAGTAATATTAGGTAGTGCATTGAGGTCTATGGTGAAAAAGAAAATATATTCAGATTAAAACTTGAAAGAAGCTGAGAAACTGCTTTGTGATGTGTGCATTCATCTCTCAGAGTTAAGCTTTTCTTTTGATTCAGCAGTTTGGAAACACTGTTTTTGTCCATTATGCGAGTGGACATTTGGGAGCTCTTTGAGGCCAATGGTGAAAAAGTGAATATCCCAGGATAAAAACTAGAAGGAAGCTATCTGAGAAACCACTTTATGATGTGTGCATTCATATCACAGAGTTAAATTCTTCTTTTCATTCAGCAGTTTGGAAAAATTTTTTGTTTGAATCTGCCAAGGTATATTTGGGAGTGTGTTGAGGACTATGTTGAAAAAGAAAATATGTTGAGATAAAAACTAGAAAGAAGCTTTCTGAGAAAATGCTTTGTCATGTGTACATTCCTCTCAGAGTTAAACCTTTCTTTTGATTCAGCAATTTGGAAACACTGTTTTTGTCCATTCTACAAATGGACATTTGGGAGCTTGATGAGGGCAAAGGCAAGAAAGCCAATATTGAAGGATAAAAACTAGAAGGAAGCTATCTGGAAAATATCTTTGTGATGTGTGCATTCATCTCACAGAGTTAAACCTTTCTTTTGATTCAATTGTTTGGAAACACTGTTTTTGTCCATTCTCTGAATGGACATTTTGAAACTCATTGAGGCCAATAGTGAAAAAGTGAATATCTCAGAATAAAAACTAGAAGGAAGTTATCTGAAAAACCACCTGGTTTGGTGTTCATTCAACTCTCAGAGTTATAACATACTTTTCATTCAGCAGTTCTGAAAAACTGATTTTGTAGAATCTGTGAAGGGATATTTGG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4645:HG2_Ill_Krunchall_21577:HG4_PB_SVrefine2PBcRDovetail_7922:HG2_Ill_SpiralSDKrefine_6089:HG4_PB_pbsv_15946:HG4_PB_SVrefine2PBcRDovetail_7921:HG4_PB_SVrefine2Falcon1Dovetail_9740;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4645:HG4_PB_SVrefine2PBcRDovetail_7921:HG4_PB_SVrefine2Falcon1Dovetail_9740;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00270027;ClusterMaxSizeDiff=0.00270027;ClusterMaxEditDist=0.0990099;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-2224;DistBack=20316;DistForward=-1013;DistMin=-1013;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1834;REFWIDENED=16:32493434-32506514;PctSeqSimilarity=0.8899;PctSizeSimilarity=0.9978;PctRecOverlap=0.5587;SizeDiff=5;StartDistance=-982;EndDistance=-977;GTMatch=0;TruScore=81;MatchId=1347.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:90:35:./.:68:16:11:16:0/0:21:0:117:0:0/0:175:0:0/1:464:91:1676096:29115:.
chr16	50509654	HG4_Ill_GATKHC_25463	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_15717:HG4_PB_assemblyticsfalcon_9555:HG4_PB_SVrefine2Falcon1Dovetail_9889:HG3_PB_assemblyticsfalcon_9736:HG3_PB_SVrefine2Falcon1Dovetail_9913:HG4_PB_SVrefine2PBcRDovetail_8017:HG2_PB_SVrefine2PBcRplusDovetail_3976:HG2_PB_SVrefine2Falcon2Bionano_7894:HG2_PB_assemblyticsPBcR_9403:HG4_Ill_Krunchall_21984:HG4_Ill_GATKHC_25463:HG4_Ill_GATKHCSBGrefine_10943:HG3_Ill_GATKHC_25365:HG3_Ill_GATKHCSBGrefine_10514:HG2_Ill_GATKHC_25539:HG2_Ill_GATKHCSBGrefine_10584:HG4_Ill_SVrefine2DISCOVARDovetail_11272:HG3_PB_SVrefine2PBcRDovetail_7750:HG3_Ill_SVrefine2DISCOVARDovetail_11447:HG2_PB_SVrefine2PB10Xhap12_11623:HG2_PB_SVrefine2Falcon1plusDovetail_4335:HG2_Ill_manta_4382:HG2_Ill_SVrefine2DISCOVARplusDovetail_4680:HG2_PB_assemblyticsfalcon_9757:HG4_Ill_MetaSV_1862:HG3_Ill_MetaSV_1917:HG4_PB_HySA_23412:HG2_10X_SVrefine210Xhap12_11110:HG2_PB_pbsv_16060:HG4_PB_pbsv_15982:HG3_PB_HySA_24277:HG4_Ill_250bpfermikitraw_20988:HG4_Ill_150bpfermikitraw_20207:HG2_PB_HySA_29288:HG2_Ill_250bpfermikitraw_21323:HG2_Ill_150bpfermikitraw_20105;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10584:HG2_Ill_GATKHC_25539:HG3_Ill_GATKHCSBGrefine_10514:HG3_Ill_GATKHC_25365:HG4_Ill_GATKHCSBGrefine_10943:HG4_Ill_GATKHC_25463:HG4_Ill_Krunchall_21984;NumExactMatchSVs=7;ClusterMaxShiftDist=0.352113;ClusterMaxSizeDiff=0.352113;ClusterMaxEditDist=0.352113;PBcalls=18;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=1;SVLEN=-135;DistBack=6088;DistForward=81548;DistMin=6088;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=83;REFWIDENED=16:50509578-50509795;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=0.9706;SizeDiff=0;StartDistance=4;EndDistance=4;GTMatch=0;TruScore=99;MatchId=1348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:0:20:0:15:./.:2:0:2:6:./.:3:26:./.:.:.:.:.:.
chr16	51513084	HG4_Ill_Krunchall_21990	ATATATATATATATGTGTATATATATATGTATATATATATATGTGTATATATATATG	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_9764:HG4_PB_assemblyticsfalcon_9562:HG4_PB_pbsv_15985:HG3_PB_pbsv_15721:HG3_PB_assemblyticsfalcon_9745:HG4_PB_HySA_23424:HG2_PB_HySA_29301:HG3_Ill_svaba_20085:HG3_Ill_manta_3572:HG3_Ill_Krunchall_21247:HG3_Ill_GATKHC_25373:HG3_Ill_GATKHCSBGrefine_10516:HG3_Ill_250bpfermikitraw_20714:HG3_Ill_150bpfermikitraw_20153:HG2_Ill_svaba_19929:HG2_Ill_scalpel_15098:HG2_Ill_Krunchall_21676:HG2_Ill_GATKHC_25545:HG2_Ill_GATKHCSBGrefine_10586:HG2_Ill_250bpfermikitraw_21331:HG2_Ill_150bpfermikitraw_20111:HG4_PB_SVrefine2PBcRDovetail_8020:HG4_Ill_scalpel_14696:HG4_Ill_SVrefine2DISCOVARDovetail_11278:HG4_Ill_Krunchall_21990:HG4_Ill_GATKHC_25470:HG4_Ill_GATKHCSBGrefine_10945:HG4_Ill_250bpfermikitraw_20995:HG4_Ill_150bpfermikitraw_20214:HG2_PB_SVrefine2PBcRplusDovetail_3979:HG2_PB_SVrefine2PB10Xhap12_11628:HG2_Ill_scalpel_15097:HG2_Ill_manta_4383:HG2_Ill_Krunchall_21675:HG2_Ill_GATKHC_25544:HG2_Ill_GATKHCSBGrefine_10585:HG2_Ill_250bpfermikitraw_21330:HG2_Ill_150bpfermikitraw_20110:HG2_PB_pbsv_16063;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20110:HG2_Ill_250bpfermikitraw_21330:HG2_Ill_GATKHCSBGrefine_10585:HG2_Ill_GATKHC_25544:HG2_Ill_Krunchall_21675:HG2_Ill_manta_4383:HG2_Ill_scalpel_15097:HG2_PB_SVrefine2PB10Xhap12_11628:HG2_PB_SVrefine2PBcRplusDovetail_3979:HG4_Ill_150bpfermikitraw_20214:HG4_Ill_250bpfermikitraw_20995:HG4_Ill_GATKHCSBGrefine_10945:HG4_Ill_GATKHC_25470:HG4_Ill_Krunchall_21990:HG4_Ill_SVrefine2DISCOVARDovetail_11278:HG4_Ill_scalpel_14696:HG4_PB_SVrefine2PBcRDovetail_8020;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0720721;PBcalls=11;Illcalls=28;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=19;HG3count=9;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=-1;DistForward=-18;DistMin=-18;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=39;REFWIDENED=16:51513085-51513179;PctSeqSimilarity=0.9821;PctSizeSimilarity=0.9643;PctRecOverlap=0.9649;SizeDiff=2;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1349.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:62:1/1:7:35:1:9:1/1:0:20:0:18:1/1:0:31:./.:.:.:.:.:.
chr16	52149513	HG2_Ill_svaba_19931	ATACTTAGTATTATATTTGAAGCATAAAAATCTAACCTGTAATATCAAGTTTAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11116:HG3_PB_HySA_24296:HG3_PB_pbsv_15722:HG4_PB_pbsv_15988:HG2_PB_pbsv_16065:HG4_PB_HySA_23431:HG2_PB_HySA_29308:HG4_Ill_svaba_19907:HG4_Ill_GATKHC_25477:HG4_Ill_GATKHCSBGrefine_10948:HG4_Ill_250bpfermikitraw_21003:HG4_Ill_150bpfermikitraw_20221:HG3_Ill_svaba_20089:HG3_Ill_manta_3573:HG3_Ill_GATKHC_25380:HG3_Ill_GATKHCSBGrefine_10517:HG3_Ill_250bpfermikitraw_20720:HG3_Ill_150bpfermikitraw_20158:HG3_10X_allpass_3075:HG2_Ill_svaba_19931:HG2_Ill_manta_4384:HG2_Ill_SpiralSDKrefine_6154:HG2_Ill_GATKHC_25550:HG2_Ill_GATKHCSBGrefine_10588:HG2_Ill_250bpfermikitraw_21336:HG2_Ill_150bpfermikitraw_20114:HG4_PB_SVrefine2PBcRDovetail_8022:HG4_PB_SVrefine2Falcon1Dovetail_9893:HG4_Ill_SVrefine2DISCOVARDovetail_11280:HG3_PB_SVrefine2PBcRDovetail_7752:HG3_PB_SVrefine2Falcon1Dovetail_9919:HG3_Ill_SVrefine2DISCOVARDovetail_11450:HG2_PB_SVrefine2PBcRplusDovetail_3980:HG2_PB_SVrefine2PB10Xhap12_11629:HG2_PB_SVrefine2Falcon2Bionano_7898:HG2_PB_SVrefine2Falcon1plusDovetail_4340:HG2_Ill_SVrefine2DISCOVARplusDovetail_4687;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20114:HG2_Ill_250bpfermikitraw_21336:HG2_Ill_GATKHCSBGrefine_10588:HG2_Ill_GATKHC_25550:HG2_Ill_SpiralSDKrefine_6154:HG2_Ill_manta_4384:HG2_Ill_svaba_19931:HG3_10X_allpass_3075:HG3_Ill_150bpfermikitraw_20158:HG3_Ill_250bpfermikitraw_20720:HG3_Ill_GATKHCSBGrefine_10517:HG3_Ill_GATKHC_25380:HG3_Ill_manta_3573:HG3_Ill_svaba_20089:HG4_Ill_150bpfermikitraw_20221:HG4_Ill_250bpfermikitraw_21003:HG4_Ill_GATKHCSBGrefine_10948:HG4_Ill_GATKHC_25477:HG4_Ill_svaba_19907;NumExactMatchSVs=19;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0560748;PBcalls=14;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-53;DistBack=90606;DistForward=-36;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=111;REFWIDENED=16:52149479-52149642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:65:1/1:3:36:2:23:./.:0:1:0:5:1/1:0:37:./.:.:.:.:.:.
chr16	56617025	HG3_10X_allpass_3080	GGCTCTTTACCCAGGCTGTGGGTTCTTGAAGAAGGACATTCTTACTAATCTTTGTATCTGGCATTCCTAACACAAAGTCTGGATTAAGGTGATGCTCAACAGATGTTTGTGGTCTGAAATGAAATTCACCACCATGTTACTCTTTTAAGCCAAGCAGGATGGTGGGGGCTACAGGGTAACTTCATGGCTCTGTATTTAACTAAGCCTGACTCTTCATGACTCAACCTTCAAGGGGTCCCACAAAAATAATTAGCCCAAAGTCAGACTCACTCAATTCTCACAGGCATTCATTCACTCAACATTCAAAGGACATTTCAGGTACTCAGGGAACCTGA	G	20	PASS	ClusterIDs=HG4_PB_HySA_23462:HG3_PB_HySA_24340:HG2_PB_HySA_29356:HG2_PB_SVrefine2PB10Xhap12_11642:HG4_Ill_Krunchall_22039:HG3_Ill_Krunchall_21307:HG3_PB_pbsv_15738:HG4_Ill_manta_3723:HG4_Ill_GATKHCSBGrefine_10959:HG4_10X_allpass_2925:HG3_Ill_scalpel_15413:HG3_Ill_manta_3578:HG3_Ill_GATKHCSBGrefine_10530:HG3_10X_allpass_3080:HG2_PB_pbsv_16081:HG2_Ill_manta_4387:HG2_Ill_breakscan11_2304:HG2_Ill_GATKHCSBGrefine_10601:HG2_10X_allpass_2509:HG4_Ill_MetaSV_1872:HG3_Ill_MetaSV_1924:HG2_Ill_Spiral_1060:HG4_PB_pbsv_16003:HG4_PB_SVrefine2PBcRDovetail_8030:HG4_PB_SVrefine2Falcon1Dovetail_9906:HG3_PB_SVrefine2PBcRDovetail_7764:HG3_Ill_SVrefine2DISCOVARDovetail_11470:HG2_PB_SVrefine2PB10Xhap12_11641:HG2_10X_SVrefine210Xhap12_11128;NumClusterSVs=29;ExactMatchIDs=HG2_10X_allpass_2509:HG2_Ill_GATKHCSBGrefine_10601:HG2_Ill_breakscan11_2304:HG2_Ill_manta_4387:HG2_PB_pbsv_16081:HG3_10X_allpass_3080:HG3_Ill_GATKHCSBGrefine_10530:HG3_Ill_manta_3578:HG3_Ill_scalpel_15413:HG4_10X_allpass_2925:HG4_Ill_GATKHCSBGrefine_10959:HG4_Ill_manta_3723;NumExactMatchSVs=12;ClusterMaxShiftDist=0.153355;ClusterMaxSizeDiff=0.153355;ClusterMaxEditDist=0.169954;PBcalls=11;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-334;DistBack=-2;DistForward=-335;DistMin=-335;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=16:56617022-56617362;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1351.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:39:1|0:7:35:17:0:1|0:0:12:54:0:0/1:53:19:0/1:18:11:.:.:.
chr16	56956849	HG2_Ill_GATKHCSBGrefine_10603	TTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_16008:HG2_PB_pbsv_16087:HG4_Ill_GATKHC_25530:HG4_Ill_GATKHCSBGrefine_10964:HG2_Ill_SpiralSDKrefine_6184:HG2_Ill_GATKHC_25604:HG2_Ill_GATKHCSBGrefine_10603:HG4_Ill_GATKHC_25529:HG4_Ill_GATKHCSBGrefine_10963:HG4_Ill_svaba_19942:HG2_Ill_manta_4388:HG2_Ill_Krunchall_21726:HG2_Ill_250bpfermikitraw_21385:HG2_Ill_150bpfermikitraw_20158:HG3_PB_assemblyticsfalcon_9782:HG4_Ill_svaba_19941:HG4_Ill_manta_3724:HG4_Ill_250bpfermikitraw_21043:HG4_10X_allpass_2926;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10603:HG2_Ill_GATKHC_25604:HG2_Ill_SpiralSDKrefine_6184:HG4_Ill_GATKHCSBGrefine_10964:HG4_Ill_GATKHC_25530;NumExactMatchSVs=5;ClusterMaxShiftDist=0.30303;ClusterMaxSizeDiff=0.30303;ClusterMaxEditDist=0.30303;PBcalls=3;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-68;DistBack=41;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=123;REFWIDENED=16:56956776-56956966;PctSeqSimilarity=0.9718;PctSizeSimilarity=0.9444;PctRecOverlap=0.9452;SizeDiff=-4;StartDistance=4;EndDistance=0;GTMatch=0;TruScore=95;MatchId=1352.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:23:0|1:19:4:4:13:0|1:20:0:0:9:0/1:22:24:./.:.:.:.:.:.
chr16	57727646	HG4_Ill_150bpfermikitraw_20269	CTTAGCACCAAGTCTGAAATACTACACACACTGTCTCGTGAGCTCTCCACAGTGCAATTGATCCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11135:HG2_PB_HySA_29365:HG2_PB_pbsv_16092:HG4_PB_pbsv_16014:HG3_PB_assemblyticsfalcon_9788:HG4_PB_HySA_23468:HG4_PB_SVrefine2PBcRDovetail_8036:HG4_PB_SVrefine2Falcon1Dovetail_9912:HG4_Ill_svaba_19947:HG4_Ill_scalpel_14739:HG4_Ill_SVrefine2DISCOVARDovetail_11304:HG4_Ill_Krunchall_22047:HG4_Ill_250bpfermikitraw_21047:HG4_Ill_150bpfermikitraw_20269:HG2_PB_SVrefine2PBcRplusDovetail_3992:HG2_PB_SVrefine2Falcon2Bionano_7912:HG2_Ill_svaba_19974:HG2_Ill_manta_4390:HG2_Ill_SpiralSDKrefine_6187:HG2_Ill_SVrefine2DISCOVARplusDovetail_4709:HG2_Ill_250bpfermikitraw_21390:HG2_Ill_150bpfermikitraw_20165;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11135:HG4_PB_SVrefine2PBcRDovetail_8036:HG4_PB_SVrefine2Falcon1Dovetail_9912:HG4_Ill_svaba_19947:HG4_Ill_scalpel_14739:HG4_Ill_SVrefine2DISCOVARDovetail_11304:HG4_Ill_Krunchall_22047:HG4_Ill_250bpfermikitraw_21047:HG4_Ill_150bpfermikitraw_20269:HG2_PB_SVrefine2PBcRplusDovetail_3992:HG2_PB_SVrefine2Falcon2Bionano_7912:HG2_Ill_svaba_19974:HG2_Ill_manta_4390:HG2_Ill_SpiralSDKrefine_6187:HG2_Ill_SVrefine2DISCOVARplusDovetail_4709:HG2_Ill_250bpfermikitraw_21390:HG2_Ill_150bpfermikitraw_20165;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.0472441;PBcalls=9;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-64;DistBack=-201;DistForward=-1;DistMin=-201;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=67;REFWIDENED=16:57727647-57727777;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1353.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:19:0|1:21:2:4:16:0|1:15:1:0:10:0/1:32:29:./.:.:.:.:.:.
chr16	57740554	HG4_Ill_GATKHCSBGrefine_10968	TCTCCCATCCATCCTCTCACCATCCTCCGATCCATCCATCCTTCCTTCCATTTCTCCTCCAACCCATCCTCCCATCCGTCCATCCTCCCATCCATC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_16093:HG4_Ill_scalpel_14740:HG4_Ill_GATKHC_25536:HG4_Ill_GATKHCSBGrefine_10968:HG2_Ill_manta_4391:HG2_Ill_GATKHC_25609:HG2_Ill_GATKHCSBGrefine_10607;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10607:HG2_Ill_GATKHC_25609:HG2_Ill_manta_4391:HG4_Ill_GATKHCSBGrefine_10968:HG4_Ill_GATKHC_25536:HG4_Ill_scalpel_14740;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0104712;ClusterMaxSizeDiff=0.0104712;ClusterMaxEditDist=0.0209424;PBcalls=1;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-95;DistBack=12841;DistForward=42;DistMin=42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:57740553-57740651;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1354.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:12:0|1:20:2:1:9:./.:332:40:73:107:0/1:8:1:./.:.:.:.:.:.
chr16	57779206	HG3_Ill_Krunchall_21317	ACCTGAGGTTGGGAGTTCGAGACCAGCCTGACCAACGTGGAGAAACCCCAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11136:HG4_PB_HySA_23469:HG3_PB_HySA_24346:HG3_PB_assemblyticsfalcon_9789:HG4_PB_assemblyticsfalcon_9613:HG2_PB_assemblyticsPBcR_9464:HG2_PB_HySA_29366:HG4_PB_SVrefine2PBcRDovetail_8037:HG4_Ill_svaba_19948:HG4_Ill_scalpel_14741:HG4_Ill_Krunchall_22048:HG4_Ill_GATKHCSBGrefine_10969:HG4_Ill_250bpfermikitraw_21048:HG4_Ill_150bpfermikitraw_20270:HG3_Ill_svaba_20139:HG3_Ill_scalpel_15419:HG3_Ill_SVrefine2DISCOVARDovetail_11479:HG3_Ill_Krunchall_21317:HG3_Ill_GATKHCSBGrefine_10537:HG3_Ill_250bpfermikitraw_20777:HG3_10X_allpass_3083:HG2_PB_SVrefine2PB10Xhap12_11650:HG2_PB_SVrefine2Falcon2Bionano_7913:HG2_PB_SVrefine2Falcon1plusDovetail_4359:HG2_Ill_svaba_19975:HG2_Ill_scalpel_15137:HG2_Ill_SVrefine2DISCOVARplusDovetail_4710:HG2_Ill_Krunchall_21731:HG2_Ill_GATKHCSBGrefine_10608:HG2_Ill_250bpfermikitraw_21391;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11136:HG4_PB_SVrefine2PBcRDovetail_8037:HG4_Ill_svaba_19948:HG4_Ill_scalpel_14741:HG4_Ill_Krunchall_22048:HG4_Ill_GATKHCSBGrefine_10969:HG4_Ill_250bpfermikitraw_21048:HG4_Ill_150bpfermikitraw_20270:HG3_Ill_svaba_20139:HG3_Ill_scalpel_15419:HG3_Ill_SVrefine2DISCOVARDovetail_11479:HG3_Ill_Krunchall_21317:HG3_Ill_GATKHCSBGrefine_10537:HG3_Ill_250bpfermikitraw_20777:HG3_10X_allpass_3083:HG2_PB_SVrefine2PB10Xhap12_11650:HG2_PB_SVrefine2Falcon2Bionano_7913:HG2_PB_SVrefine2Falcon1plusDovetail_4359:HG2_Ill_svaba_19975:HG2_Ill_scalpel_15137:HG2_Ill_SVrefine2DISCOVARplusDovetail_4710:HG2_Ill_Krunchall_21731:HG2_Ill_GATKHCSBGrefine_10608:HG2_Ill_250bpfermikitraw_21391;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.038835;PBcalls=10;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=38513;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=51;REFWIDENED=16:57779207-57779307;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:0:31:2:23:./.:0:5:0:8:1/1:0:40:./.:.:.:.:.:.
chr16	58614873	HG2_Ill_svaba_19981	AACTGTTAAAAGACATTTCTGAGCCAATTAGGGAAACTTAACGTTGCCTTGGAAATGAACATCATTAAACTATTGGGAAAACACCTTG	A	20	PASS	ClusterIDs=HG2_PB_HySA_29374:HG3_PB_pbsv_15753:HG2_PB_pbsv_16095:HG4_Ill_GATKHC_25551:HG4_Ill_GATKHCSBGrefine_10972:HG3_Ill_GATKHC_25459:HG3_Ill_GATKHCSBGrefine_10540:HG2_Ill_GATKHC_25620:HG2_Ill_GATKHCSBGrefine_10610:HG4_PB_SVrefine2PBcRDovetail_8039:HG4_PB_SVrefine2Falcon1Dovetail_9914:HG4_Ill_manta_3725:HG4_Ill_SVrefine2DISCOVARDovetail_11307:HG3_PB_SVrefine2PBcRDovetail_7769:HG2_PB_SVrefine2PBcRplusDovetail_3993:HG2_PB_SVrefine2PB10Xhap12_11652:HG2_PB_SVrefine2Falcon1plusDovetail_4360:HG2_Ill_manta_4393:HG4_Ill_Spiral_1251:HG3_Ill_Spiral_16578:HG2_Ill_Spiral_1061:HG4_PB_pbsv_16016:HG4_PB_assemblyticsfalcon_9619:HG2_PB_assemblyticsfalcon_9822:HG2_PB_assemblyticsPBcR_9469:HG4_Ill_svaba_19961:HG4_Ill_Krunchall_22061:HG4_Ill_250bpfermikitraw_21062:HG4_Ill_150bpfermikitraw_20285:HG3_Ill_svaba_20149:HG3_Ill_Krunchall_21326:HG3_Ill_250bpfermikitraw_20786:HG2_Ill_svaba_19981:HG2_Ill_Krunchall_21739:HG2_Ill_250bpfermikitraw_21400:HG2_Ill_150bpfermikitraw_20176:HG4_PB_HySA_23480;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20176:HG2_Ill_250bpfermikitraw_21400:HG2_Ill_Krunchall_21739:HG2_Ill_svaba_19981:HG3_Ill_250bpfermikitraw_20786:HG3_Ill_Krunchall_21326:HG3_Ill_svaba_20149:HG4_Ill_150bpfermikitraw_20285:HG4_Ill_250bpfermikitraw_21062:HG4_Ill_Krunchall_22061:HG4_Ill_svaba_19961;NumExactMatchSVs=11;ClusterMaxShiftDist=0.045977;ClusterMaxSizeDiff=0.045977;ClusterMaxEditDist=0.0584795;PBcalls=14;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=14;NumTechs=2;NumTechsExact=1;SVLEN=-87;DistBack=-53;DistForward=-17;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=94;REFWIDENED=16:58614874-58615054;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1356.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:32:0|1:27:0:0:29:0|1:26:0:0:9:0/1:28:21:./.:.:.:.:.:.
chr16	58744555	HG3_PB_SVrefine2PBcRDovetail_7771	GCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11138:HG4_PB_HySA_23481:HG3_PB_pbsv_15755:HG4_PB_pbsv_16018:HG2_PB_HySA_29375:HG4_Ill_svaba_19962:HG4_Ill_GATKHCSBGrefine_10974:HG3_Ill_svaba_20150:HG3_Ill_Krunchall_21328:HG3_Ill_GATKHC_25460:HG3_Ill_GATKHCSBGrefine_10541:HG2_Ill_svaba_19982:HG2_Ill_Krunchall_21740:HG2_Ill_GATKHCSBGrefine_10611:HG2_PB_pbsv_16097:HG4_PB_SVrefine2PBcRDovetail_8041:HG4_PB_SVrefine2Falcon1Dovetail_9916:HG3_PB_SVrefine2PBcRDovetail_7771:HG3_PB_SVrefine2Falcon1Dovetail_9935:HG3_PB_HySA_24354:HG3_Ill_SVrefine2DISCOVARDovetail_11486:HG2_PB_SVrefine2PBcRplusDovetail_3995:HG2_PB_SVrefine2PB10Xhap12_11655:HG2_PB_SVrefine2Falcon2Bionano_7915;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11138:HG4_PB_SVrefine2PBcRDovetail_8041:HG4_PB_SVrefine2Falcon1Dovetail_9916:HG3_PB_SVrefine2PBcRDovetail_7771:HG3_PB_SVrefine2Falcon1Dovetail_9935:HG3_PB_HySA_24354:HG3_Ill_SVrefine2DISCOVARDovetail_11486:HG2_PB_SVrefine2PBcRplusDovetail_3995:HG2_PB_SVrefine2PB10Xhap12_11655:HG2_PB_SVrefine2Falcon2Bionano_7915;NumExactMatchSVs=10;ClusterMaxShiftDist=0.170732;ClusterMaxSizeDiff=0.170732;ClusterMaxEditDist=0.173913;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-86;DistBack=67255;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=92;REFWIDENED=16:58744556-58744733;PctSeqSimilarity=0.9924;PctSizeSimilarity=1;PctRecOverlap=0.2529;SizeDiff=0;StartDistance=-65;EndDistance=-65;GTMatch=0;TruScore=74;MatchId=1357.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:38:0|1:25:0:2:37:./.:1:2:18:1:0/1:21:10:./.:.:.:.:.:.
chr16	58819558	HG4_Ill_GATKHCSBGrefine_10976	AGCCAGGTGCAGGATATAATCTCCTGGTGTGCTGTTTGCTGAGACCCTTGGAAGAGCGCAGTATTACAGTGAGAGT	A	20	PASS	ClusterIDs=HG2_PB_HySA_29377:HG3_Ill_Krunchall_21331:HG2_Ill_Krunchall_21742:HG4_PB_HySA_23483:HG4_PB_assemblyticsfalcon_9622:HG4_Ill_svaba_19964:HG4_Ill_scalpel_14753:HG4_Ill_manta_3726:HG4_Ill_Krunchall_22062:HG4_Ill_GATKHC_25553:HG4_Ill_GATKHCSBGrefine_10976:HG4_Ill_250bpfermikitraw_21064:HG4_Ill_150bpfermikitraw_20288:HG4_CG_vcfBeta_10131:HG4_10X_allpass_2929:HG3_Ill_svaba_20151:HG3_Ill_scalpel_15426:HG3_Ill_manta_3582:HG3_Ill_Krunchall_21330:HG3_Ill_GATKHC_25461:HG3_Ill_GATKHCSBGrefine_10542:HG3_Ill_250bpfermikitraw_20788:HG3_Ill_150bpfermikitraw_20225:HG3_10X_allpass_3085:HG2_PB_pbsv_16099:HG2_Ill_svaba_19984:HG2_Ill_scalpel_15145:HG2_Ill_manta_4394:HG2_Ill_Krunchall_21741:HG2_Ill_GATKHC_25622:HG2_Ill_GATKHCSBGrefine_10613:HG2_Ill_250bpfermikitraw_21403:HG2_Ill_150bpfermikitraw_20179:HG2_CG_vcfBeta_9092:HG2_10X_allpass_2510:HG3_PB_assemblyticsfalcon_9799:HG2_PB_assemblyticsfalcon_9825:HG3_PB_pbsv_15756:HG4_PB_pbsv_16020;NumClusterSVs=39;ExactMatchIDs=HG2_10X_allpass_2510:HG2_CG_vcfBeta_9092:HG2_Ill_150bpfermikitraw_20179:HG2_Ill_250bpfermikitraw_21403:HG2_Ill_GATKHCSBGrefine_10613:HG2_Ill_GATKHC_25622:HG2_Ill_Krunchall_21741:HG2_Ill_manta_4394:HG2_Ill_scalpel_15145:HG2_Ill_svaba_19984:HG2_PB_pbsv_16099:HG3_10X_allpass_3085:HG3_Ill_150bpfermikitraw_20225:HG3_Ill_250bpfermikitraw_20788:HG3_Ill_GATKHCSBGrefine_10542:HG3_Ill_GATKHC_25461:HG3_Ill_Krunchall_21330:HG3_Ill_manta_3582:HG3_Ill_scalpel_15426:HG3_Ill_svaba_20151:HG4_10X_allpass_2929:HG4_CG_vcfBeta_10131:HG4_Ill_150bpfermikitraw_20288:HG4_Ill_250bpfermikitraw_21064:HG4_Ill_GATKHCSBGrefine_10976:HG4_Ill_GATKHC_25553:HG4_Ill_Krunchall_22062:HG4_Ill_manta_3726:HG4_Ill_scalpel_14753:HG4_Ill_svaba_19964;NumExactMatchSVs=30;ClusterMaxShiftDist=0.17284;ClusterMaxSizeDiff=0.17284;ClusterMaxEditDist=0.17284;PBcalls=8;Illcalls=26;TenXcalls=3;CGcalls=2;PBexactcalls=1;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=2;HG2count=14;HG3count=12;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-75;DistBack=22744;DistForward=13314;DistMin=13314;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:58819557-58819635;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:21:0|1:25:2:0:19:1|0:0:25:36:0:0/1:33:24:./.:.:.:.:.:.
chr16	60032082	HG3_Ill_manta_3585	TGGGAAGATTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2305:HG3_PB_HySA_24368:HG4_PB_assemblyticsfalcon_9631:HG2_Ill_Spiral_1064:HG3_PB_pbsv_15761:HG4_PB_HySA_23497:HG4_PB_pbsv_16026:HG2_PB_pbsv_16107:HG2_PB_HySA_29400:HG2_PB_PB10Xdip_12080:HG4_Ill_MetaSV_1876:HG3_Ill_MetaSV_1929:HG2_Ill_tnscope_1735:HG4_PB_SVrefine2PBcRDovetail_8043:HG4_PB_SVrefine2Falcon1Dovetail_9920:HG4_Ill_scalpel_14765:HG4_Ill_manta_3730:HG4_Ill_SVrefine2DISCOVARDovetail_11315:HG4_Ill_GATKHCSBGrefine_10987:HG4_10X_allpass_2932:HG3_PB_SVrefine2PBcRDovetail_7776:HG3_PB_SVrefine2Falcon1Dovetail_9940:HG3_Ill_scalpel_15438:HG3_Ill_manta_3585:HG3_Ill_GATKHCSBGrefine_10551:HG3_10X_allpass_3086:HG2_PB_SVrefine2PBcRplusDovetail_3999:HG2_PB_SVrefine2Falcon1plusDovetail_4370:HG2_Ill_scalpel_15156:HG2_Ill_manta_4399:HG2_Ill_SVrefine2DISCOVARplusDovetail_4721:HG2_Ill_MetaSV_1815:HG2_Ill_GATKHCSBGrefine_10624:HG2_10X_allpass_2512:HG2_10X_SVrefine210Xhap12_11146:HG2_PB_SVrefine2PB10Xhap12_11659:HG4_Ill_Spiral_1254;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11146:HG2_10X_allpass_2512:HG2_Ill_GATKHCSBGrefine_10624:HG2_Ill_MetaSV_1815:HG2_Ill_SVrefine2DISCOVARplusDovetail_4721:HG2_Ill_manta_4399:HG2_Ill_scalpel_15156:HG2_PB_SVrefine2Falcon1plusDovetail_4370:HG2_PB_SVrefine2PBcRplusDovetail_3999:HG3_10X_allpass_3086:HG3_Ill_GATKHCSBGrefine_10551:HG3_Ill_manta_3585:HG3_Ill_scalpel_15438:HG3_PB_SVrefine2Falcon1Dovetail_9940:HG3_PB_SVrefine2PBcRDovetail_7776:HG4_10X_allpass_2932:HG4_Ill_GATKHCSBGrefine_10987:HG4_Ill_SVrefine2DISCOVARDovetail_11315:HG4_Ill_manta_3730:HG4_Ill_scalpel_14765:HG4_PB_SVrefine2Falcon1Dovetail_9920:HG4_PB_SVrefine2PBcRDovetail_8043;NumExactMatchSVs=22;ClusterMaxShiftDist=0.00634921;ClusterMaxSizeDiff=0.00634921;ClusterMaxEditDist=0.0286624;PBcalls=15;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=11420;DistForward=-298;DistMin=-298;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=16:60032083-60032414;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:27:0|1:26:0:1:25:0|1:32:0:0:25:0/1:21:7:0/1:18:7:.:.:.
chr16	60062621	HG2_PB_SVrefine2Falcon2Bionano_7918	ATATATATATATATACACATATATATGTATATATATGTATATATATACACGTGTATATATATACATATATATACACGTGTATATATATACATATATATATACACGTGTATATATATACATATATATATACACGTGTATATATATATACATATATATACACGTGTATATATATATATAAAATCAGTTTCCGTTAGCCTTTATAAGATCATGGATCTTATAATTATGTATATATATATATATG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11661:HG2_Ill_MetaSV_1817:HG2_Ill_SpiralSDKrefine_6203:HG3_PB_pbsv_15763:HG3_Ill_Krunchall_21348:HG2_PB_pbsv_16109:HG4_PB_SVrefine2Falcon1Dovetail_9922:HG3_Ill_SVrefine2DISCOVARDovetail_11493:HG2_PB_SVrefine2Falcon2Bionano_7918:HG2_Ill_SVrefine2DISCOVARplusDovetail_4722:HG2_10X_SVrefine210Xhap12_11148;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11148:HG2_Ill_SVrefine2DISCOVARplusDovetail_4722:HG2_PB_SVrefine2Falcon2Bionano_7918:HG3_Ill_SVrefine2DISCOVARDovetail_11493:HG4_PB_SVrefine2Falcon1Dovetail_9922;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0293501;ClusterMaxSizeDiff=0.0293501;ClusterMaxEditDist=0.0708333;PBcalls=5;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-240;DistBack=-303;DistForward=-240;DistMin=-303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=88;REFWIDENED=16:60062622-60062949;PctSeqSimilarity=0.9;PctSizeSimilarity=0.9917;PctRecOverlap=0.751;SizeDiff=2;StartDistance=-60;EndDistance=-58;GTMatch=0;TruScore=88;MatchId=1360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:35:0|1:33:0:3:27:./.:5:13:36:2:0/1:32:6:./.:.:.:.:.:.
chr16	62046861	HG2_Ill_SVrefine2DISCOVARplusDovetail_4733	TAAATTAACTACTTAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1065:HG3_PB_HySA_24389:HG4_Ill_Krunchall_22101:HG3_PB_pbsv_15771:HG3_Ill_Krunchall_21365:HG2_Ill_Krunchall_21782:HG3_PB_assemblyticsfalcon_9831:HG2_PB_assemblyticsPBcR_9503:HG2_PB_assemblyticsfalcon_9861:HG4_Ill_MetaSV_1880:HG3_Ill_MetaSV_1935:HG2_Ill_tnscope_1736:HG2_Ill_MetaSV_1821:HG4_PB_SVrefine2Falcon1Dovetail_9929:HG4_Ill_manta_3734:HG4_Ill_GATKHCSBGrefine_10997:HG4_10X_allpass_2933:HG3_PB_SVrefine2PBcRDovetail_7783:HG3_PB_SVrefine2Falcon1Dovetail_9946:HG3_Ill_scalpel_15453:HG3_Ill_manta_3591:HG3_Ill_SVrefine2DISCOVARDovetail_11510:HG3_Ill_GATKHCSBGrefine_10567:HG3_10X_allpass_3089:HG2_PB_pbsv_16118:HG2_PB_SVrefine2PBcRplusDovetail_4006:HG2_PB_SVrefine2PB10Xhap12_11666:HG2_PB_SVrefine2Falcon2Bionano_7922:HG2_PB_SVrefine2Falcon1plusDovetail_4375:HG2_PB_HySA_29418:HG2_Ill_scalpel_15169:HG2_Ill_manta_4403:HG2_Ill_SVrefine2DISCOVARplusDovetail_4733:HG2_Ill_GATKHCSBGrefine_10637:HG2_10X_allpass_2513:HG2_10X_SVrefine210Xhap12_11159:HG4_PB_pbsv_16037:HG2_Ill_breakscan11_2306:HG4_Ill_Spiral_1256:HG3_Ill_Spiral_16602;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11159:HG2_10X_allpass_2513:HG2_Ill_GATKHCSBGrefine_10637:HG2_Ill_SVrefine2DISCOVARplusDovetail_4733:HG2_Ill_manta_4403:HG2_Ill_scalpel_15169:HG2_PB_HySA_29418:HG2_PB_SVrefine2Falcon1plusDovetail_4375:HG2_PB_SVrefine2Falcon2Bionano_7922:HG2_PB_SVrefine2PB10Xhap12_11666:HG2_PB_SVrefine2PBcRplusDovetail_4006:HG2_PB_pbsv_16118:HG3_10X_allpass_3089:HG3_Ill_GATKHCSBGrefine_10567:HG3_Ill_SVrefine2DISCOVARDovetail_11510:HG3_Ill_manta_3591:HG3_Ill_scalpel_15453:HG3_PB_SVrefine2Falcon1Dovetail_9946:HG3_PB_SVrefine2PBcRDovetail_7783:HG4_10X_allpass_2933:HG4_Ill_GATKHCSBGrefine_10997:HG4_Ill_manta_3734:HG4_PB_SVrefine2Falcon1Dovetail_9929;NumExactMatchSVs=23;ClusterMaxShiftDist=0.139881;ClusterMaxSizeDiff=0.139881;ClusterMaxEditDist=0.139881;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=29042;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=16:62046862-62047209;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:57:1/1:2:28:0:21:1/1:0:24:0:20:1/1:0:42:./.:2:9:.:.:.
chr16	63618536	HG2_PB_pbsv_16119	ATATATATATATATATATATATACACATGTATATATATACACGTATATATATATATACATATACGTGTATATATATACGTGTATATATATACATATATATATATACGTGTATATATATACATATATATATACGTGTATATATATACACGTATATATATATATATAT	A	20	PASS	ClusterIDs=HG2_PB_HySA_29431:HG3_PB_HySA_24403:HG4_PB_assemblyticsfalcon_9668:HG2_PB_PB10Xdip_12092:HG4_PB_SVrefine2Falcon1Dovetail_9932:HG3_PB_SVrefine2PBcRDovetail_7784:HG2_PB_SVrefine2Falcon2Bionano_7923:HG2_PB_SVrefine2Falcon1plusDovetail_4377:HG2_PB_SVrefine2PBcRplusDovetail_4008:HG2_10X_SVrefine210Xhap12_11162:HG2_PB_assemblyticsfalcon_9874:HG2_PB_assemblyticsPBcR_9516:HG4_Ill_scalpel_14792:HG3_PB_pbsv_15775:HG4_PB_pbsv_16039:HG2_PB_pbsv_16119;NumClusterSVs=16;ExactMatchIDs=HG2_PB_pbsv_16119:HG4_PB_pbsv_16039;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0473373;ClusterMaxSizeDiff=0.0473373;ClusterMaxEditDist=0.0786517;PBcalls=14;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=-165;DistBack=15;DistForward=-165;DistMin=-165;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=35;REFWIDENED=16:63618535-63618736;PctSeqSimilarity=0.9754;PctSizeSimilarity=0.988;PctRecOverlap=0.9286;SizeDiff=-2;StartDistance=-10;EndDistance=-12;GTMatch=0;TruScore=96;MatchId=1362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:23:0|1:18:1:1:22:./.:16:0:1:9:0/0:22:2:./.:.:.:.:.:.
chr16	63756306	HG4_Ill_Krunchall_22122	GATTGCTGGGTCAAATGATATTTCTGCTTCTAGATCCTTGAGGAATCACCGTACTGTCTTCCACAATGGTTGAACGAATTTAC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11163:HG2_PB_assemblyticsfalcon_9875:HG4_PB_assemblyticsfalcon_9669:HG3_PB_assemblyticsfalcon_9843:HG4_PB_HySA_23523:HG4_PB_pbsv_16040:HG4_PB_SVrefine2PBcRDovetail_8048:HG4_PB_SVrefine2Falcon1Dovetail_9933:HG4_Ill_svaba_20008:HG4_Ill_scalpel_14793:HG4_Ill_manta_3736:HG4_Ill_SVrefine2DISCOVARDovetail_11331:HG4_Ill_Krunchall_22122:HG4_Ill_GATKHC_25615:HG4_Ill_GATKHCSBGrefine_11000:HG4_Ill_250bpfermikitraw_21120:HG4_Ill_150bpfermikitraw_20342:HG4_10X_allpass_2935:HG3_PB_SVrefine2Falcon1Dovetail_9949:HG2_PB_pbsv_16120:HG2_PB_SVrefine2PB10Xhap12_11669:HG2_PB_SVrefine2Falcon2Bionano_7924:HG2_Ill_svaba_20033:HG2_Ill_scalpel_15178:HG2_Ill_breakscan11_2308:HG2_Ill_SpiralSDKrefine_6232:HG2_Ill_SVrefine2DISCOVARplusDovetail_4742:HG2_Ill_Krunchall_21798:HG2_Ill_GATKHC_25681:HG2_Ill_GATKHCSBGrefine_10639:HG2_Ill_250bpfermikitraw_21459:HG2_Ill_150bpfermikitraw_20233:HG2_CG_vcfBeta_9111:HG2_10X_allpass_2514;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11163:HG4_PB_pbsv_16040:HG4_PB_SVrefine2PBcRDovetail_8048:HG4_PB_SVrefine2Falcon1Dovetail_9933:HG4_Ill_svaba_20008:HG4_Ill_scalpel_14793:HG4_Ill_manta_3736:HG4_Ill_SVrefine2DISCOVARDovetail_11331:HG4_Ill_Krunchall_22122:HG4_Ill_GATKHC_25615:HG4_Ill_GATKHCSBGrefine_11000:HG4_Ill_250bpfermikitraw_21120:HG4_Ill_150bpfermikitraw_20342:HG4_10X_allpass_2935:HG3_PB_SVrefine2Falcon1Dovetail_9949:HG2_PB_pbsv_16120:HG2_PB_SVrefine2PB10Xhap12_11669:HG2_PB_SVrefine2Falcon2Bionano_7924:HG2_Ill_svaba_20033:HG2_Ill_scalpel_15178:HG2_Ill_breakscan11_2308:HG2_Ill_SpiralSDKrefine_6232:HG2_Ill_SVrefine2DISCOVARplusDovetail_4742:HG2_Ill_Krunchall_21798:HG2_Ill_GATKHC_25681:HG2_Ill_GATKHCSBGrefine_10639:HG2_Ill_250bpfermikitraw_21459:HG2_Ill_150bpfermikitraw_20233:HG2_CG_vcfBeta_9111:HG2_10X_allpass_2514;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.0606061;PBcalls=11;Illcalls=19;TenXcalls=3;CGcalls=1;PBexactcalls=7;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=1;HG2count=17;HG3count=2;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-82;DistBack=67972;DistForward=-83;DistMin=-83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=16:63756307-63756391;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:36:./.:20:19:14:12:1|0:0:18:40:0:0/1:33:17:./.:.:.:.:.:.
chr16	66823193	HG4_Ill_GATKHCSBGrefine_11007	TAAAAAAAAATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_23556:HG4_10X_allpass_2936:HG4_PB_assemblyticsfalcon_9693:HG3_PB_assemblyticsfalcon_9862:HG3_PB_HySA_24438:HG3_Ill_MetaSV_1938:HG2_Ill_tnscope_1737:HG2_Ill_MetaSV_1823:HG4_PB_pbsv_16054:HG4_Ill_GATKHCSBGrefine_11007:HG3_Ill_scalpel_15480:HG3_Ill_GATKHCSBGrefine_10580:HG3_10X_allpass_3090:HG2_10X_allpass_2515:HG3_PB_pbsv_15788:HG2_PB_pbsv_16133:HG4_Ill_Spiral_1258:HG2_Ill_Spiral_1066:HG4_PB_SVrefine2Falcon1Dovetail_9943:HG3_PB_SVrefine2Falcon1Dovetail_9958:HG3_Ill_SVrefine2DISCOVARDovetail_11531:HG2_10X_SVrefine210Xhap12_11168:HG4_PB_SVrefine2PBcRDovetail_8059;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_2515:HG3_10X_allpass_3090:HG3_Ill_GATKHCSBGrefine_10580:HG3_Ill_scalpel_15480:HG4_Ill_GATKHCSBGrefine_11007:HG4_PB_pbsv_16054;NumExactMatchSVs=6;ClusterMaxShiftDist=0.184087;ClusterMaxSizeDiff=0.184087;ClusterMaxEditDist=0.184087;PBcalls=10;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=6;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-334;DistBack=-573;DistForward=-335;DistMin=-573;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=16:66823176-66823539;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:0|1:27:0:0:21:1|0:0:23:31:0:0/1:16:6:0/1:28:10:.:.:.
chr16	69359262	HG4_Ill_250bpfermikitraw_21149	TGCCGCTAACATTTAAAAGTCGAGAGTTGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11181:HG2_PB_pbsv_16143:HG2_PB_HySA_29476:HG4_PB_pbsv_16063:HG4_Ill_svaba_20039:HG4_Ill_scalpel_14813:HG4_Ill_manta_3740:HG4_Ill_SVrefine2DISCOVARDovetail_11352:HG4_Ill_Krunchall_22154:HG4_Ill_GATKHC_25654:HG4_Ill_GATKHCSBGrefine_11011:HG4_Ill_250bpfermikitraw_21149:HG2_PB_SVrefine2Falcon2Bionano_7941:HG2_PB_SVrefine2Falcon1plusDovetail_4395:HG2_Ill_svaba_20067:HG2_Ill_manta_4409:HG2_Ill_SpiralSDKrefine_6251:HG2_Ill_GATKHCSBGrefine_10649:HG2_Ill_250bpfermikitraw_21487;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11181:HG4_Ill_svaba_20039:HG4_Ill_scalpel_14813:HG4_Ill_manta_3740:HG4_Ill_SVrefine2DISCOVARDovetail_11352:HG4_Ill_Krunchall_22154:HG4_Ill_GATKHC_25654:HG4_Ill_GATKHCSBGrefine_11011:HG4_Ill_250bpfermikitraw_21149:HG2_PB_SVrefine2Falcon2Bionano_7941:HG2_PB_SVrefine2Falcon1plusDovetail_4395:HG2_Ill_svaba_20067:HG2_Ill_manta_4409:HG2_Ill_SpiralSDKrefine_6251:HG2_Ill_GATKHCSBGrefine_10649:HG2_Ill_250bpfermikitraw_21487;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0296296;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0444444;PBcalls=5;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-68;DistBack=6194;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=69;REFWIDENED=16:69359263-69359399;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1366.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:20:0|1:29:1:1:19:./.:15:1:0:3:0/1:41:17:./.:.:.:.:.:.
chr16	70553009	HG2_Ill_SVrefine2DISCOVARplusDovetail_4774	TAGGATTTGCATTTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCATTGCAAGCTCCGCTTCCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11188:HG2_PB_assemblyticsPBcR_9569:HG2_Ill_Krunchall_21831:HG3_PB_assemblyticsfalcon_9881:HG2_PB_pbsv_16149:HG3_PB_pbsv_15804:HG3_Ill_MetaSV_1942:HG2_Ill_tnscope_1740:HG4_PB_assemblyticsfalcon_9716:HG3_PB_SVrefine2PBcRDovetail_7795:HG3_PB_SVrefine2Falcon1Dovetail_9971:HG3_PB_HySA_24460:HG3_Ill_scalpel_15491:HG3_Ill_manta_3595:HG3_Ill_SVrefine2DISCOVARDovetail_11557:HG3_Ill_GATKHCSBGrefine_10587:HG3_10X_allpass_3092:HG2_PB_assemblyticsfalcon_9920:HG2_PB_SVrefine2PBcRplusDovetail_4026:HG2_PB_SVrefine2PB10Xhap12_11690:HG2_PB_SVrefine2Falcon1plusDovetail_4400:HG2_Ill_scalpel_15206:HG2_Ill_manta_4412:HG2_Ill_breakscan11_2309:HG2_Ill_SVrefine2DISCOVARplusDovetail_4774:HG2_Ill_GATKHCSBGrefine_10652:HG2_10X_allpass_2517;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11188:HG4_PB_assemblyticsfalcon_9716:HG3_PB_SVrefine2PBcRDovetail_7795:HG3_PB_SVrefine2Falcon1Dovetail_9971:HG3_PB_HySA_24460:HG3_Ill_scalpel_15491:HG3_Ill_manta_3595:HG3_Ill_SVrefine2DISCOVARDovetail_11557:HG3_Ill_GATKHCSBGrefine_10587:HG3_10X_allpass_3092:HG2_PB_assemblyticsfalcon_9920:HG2_PB_SVrefine2PBcRplusDovetail_4026:HG2_PB_SVrefine2PB10Xhap12_11690:HG2_PB_SVrefine2Falcon1plusDovetail_4400:HG2_Ill_scalpel_15206:HG2_Ill_manta_4412:HG2_Ill_breakscan11_2309:HG2_Ill_SVrefine2DISCOVARplusDovetail_4774:HG2_Ill_GATKHCSBGrefine_10652:HG2_10X_allpass_2517;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0923567;ClusterMaxSizeDiff=0.0923567;ClusterMaxEditDist=0.0923567;PBcalls=12;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=-321;DistForward=-306;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=16:70553010-70553344;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:32:0|1:19:0:1:27:0|1:68:0:0:22:0/1:39:14:0/1:30:9:.:.:.
chr16	72753292	HG3_Ill_scalpel_15496	CATAGATTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCT	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2311:HG2_PB_HySA_29513:HG3_PB_assemblyticsfalcon_9896:HG2_PB_assemblyticsPBcR_9583:HG4_PB_assemblyticsfalcon_9733:HG2_PB_assemblyticsfalcon_9936:HG3_Ill_Krunchall_21433:HG2_Ill_Krunchall_21841:HG4_PB_HySA_23594:HG3_PB_HySA_24486:HG3_PB_pbsv_15812:HG4_Ill_MetaSV_1890:HG3_Ill_MetaSV_1945:HG2_Ill_tnscope_1742:HG2_Ill_MetaSV_1828:HG4_PB_pbsv_16078:HG4_PB_SVrefine2PBcRDovetail_8075:HG4_PB_SVrefine2Falcon1Dovetail_9961:HG4_Ill_scalpel_14825:HG4_Ill_manta_3743:HG4_Ill_SVrefine2DISCOVARDovetail_11371:HG4_Ill_GATKHCSBGrefine_11019:HG4_10X_allpass_2939:HG3_PB_SVrefine2PBcRDovetail_7803:HG3_PB_SVrefine2Falcon1Dovetail_9980:HG3_Ill_scalpel_15496:HG3_Ill_manta_3597:HG3_Ill_SVrefine2DISCOVARDovetail_11569:HG3_Ill_GATKHCSBGrefine_10594:HG2_PB_pbsv_16155:HG2_PB_SVrefine2PBcRplusDovetail_4034:HG2_PB_SVrefine2PB10Xhap12_11701:HG2_PB_SVrefine2Falcon2Bionano_7949:HG2_PB_SVrefine2Falcon1plusDovetail_4411:HG2_Ill_scalpel_15212:HG2_Ill_manta_4414:HG2_Ill_SVrefine2DISCOVARplusDovetail_4785:HG2_Ill_GATKHCSBGrefine_10657:HG2_10X_allpass_2518:HG2_10X_SVrefine210Xhap12_11198;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11198:HG2_10X_allpass_2518:HG2_Ill_GATKHCSBGrefine_10657:HG2_Ill_SVrefine2DISCOVARplusDovetail_4785:HG2_Ill_manta_4414:HG2_Ill_scalpel_15212:HG2_PB_SVrefine2Falcon1plusDovetail_4411:HG2_PB_SVrefine2Falcon2Bionano_7949:HG2_PB_SVrefine2PB10Xhap12_11701:HG2_PB_SVrefine2PBcRplusDovetail_4034:HG2_PB_pbsv_16155:HG3_Ill_GATKHCSBGrefine_10594:HG3_Ill_SVrefine2DISCOVARDovetail_11569:HG3_Ill_manta_3597:HG3_Ill_scalpel_15496:HG3_PB_SVrefine2Falcon1Dovetail_9980:HG3_PB_SVrefine2PBcRDovetail_7803:HG4_10X_allpass_2939:HG4_Ill_GATKHCSBGrefine_11019:HG4_Ill_SVrefine2DISCOVARDovetail_11371:HG4_Ill_manta_3743:HG4_Ill_scalpel_14825:HG4_PB_SVrefine2Falcon1Dovetail_9961:HG4_PB_SVrefine2PBcRDovetail_8075:HG4_PB_pbsv_16078;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0630182;ClusterMaxSizeDiff=0.0630182;ClusterMaxEditDist=0.0630182;PBcalls=18;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-305;DistBack=24046;DistForward=55148;DistMin=24046;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=16:72753293-72753607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1368.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:92:1/1:0:23:0:11:1/1:0:19:0:10:1/1:0:51:0/1:2:8:.:.:.
chr16	73383537	HG2_Ill_GATKHCSBGrefine_10658	CTCCCTCCCTCTCTCCCTCCTTCCCTCTCTCCCTCCTTCCCTCTCTCCCTCTCCCTTCCT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_16159:HG2_PB_HySA_29520:HG3_PB_HySA_24490:HG2_PB_HySA_29519:HG4_PB_HySA_23600:HG4_Ill_svaba_20055:HG4_Ill_scalpel_14832:HG4_Ill_GATKHC_25688:HG4_Ill_GATKHCSBGrefine_11020:HG3_Ill_svaba_20255:HG2_Ill_svaba_20083:HG2_Ill_GATKHC_25745:HG2_Ill_GATKHCSBGrefine_10658:HG4_PB_pbsv_16082:HG3_PB_pbsv_15814:HG2_PB_assemblyticsPBcR_9588:HG3_PB_assemblyticsfalcon_9902;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10658:HG2_Ill_GATKHC_25745:HG2_Ill_svaba_20083:HG3_Ill_svaba_20255:HG4_Ill_GATKHCSBGrefine_11020:HG4_Ill_GATKHC_25688:HG4_Ill_scalpel_14832:HG4_Ill_svaba_20055;NumExactMatchSVs=8;ClusterMaxShiftDist=0.175439;ClusterMaxSizeDiff=0.175439;ClusterMaxEditDist=0.192982;PBcalls=9;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-59;DistBack=-28;DistForward=24657;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=16:73383536-73383607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:56:1/1:5:29:0:8:./.:2:19:2:9:./.:0:8:./.:.:.:.:.:.
chr16	74809778	HG2_Ill_GATKHC_25765	GCAGCCTCGACCTCCCGGGCTCAAGCAATCCTCTTACCTCAGCCTCCCAAGTAGCTGGCACTA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_16083:HG3_PB_HySA_24501:HG3_PB_pbsv_15817:HG2_PB_HySA_29540:HG4_PB_HySA_23611:HG4_PB_assemblyticsfalcon_9750:HG4_Ill_svaba_20068:HG4_Ill_scalpel_14842:HG4_Ill_manta_3744:HG4_Ill_Krunchall_22186:HG4_Ill_GATKHC_25704:HG4_Ill_GATKHCSBGrefine_11022:HG4_Ill_250bpfermikitraw_21183:HG4_Ill_150bpfermikitraw_20404:HG4_CG_vcfBeta_10194:HG4_10X_allpass_2940:HG3_Ill_svaba_20266:HG3_Ill_scalpel_15510:HG3_Ill_Krunchall_21456:HG3_Ill_GATKHC_25614:HG3_Ill_GATKHCSBGrefine_10595:HG3_Ill_250bpfermikitraw_20907:HG3_Ill_150bpfermikitraw_20341:HG3_CG_vcfBeta_8701:HG3_10X_allpass_3095:HG2_PB_pbsv_16162:HG2_Ill_svaba_20095:HG2_Ill_scalpel_15228:HG2_Ill_manta_4415:HG2_Ill_SpiralSDKrefine_6271:HG2_Ill_Krunchall_21860:HG2_Ill_GATKHC_25765:HG2_Ill_GATKHCSBGrefine_10660:HG2_Ill_250bpfermikitraw_21522:HG2_Ill_150bpfermikitraw_20298:HG2_CG_vcfBeta_9163:HG2_10X_allpass_2519:HG4_Ill_SVrefine2DISCOVARDovetail_11381:HG3_PB_SVrefine2PBcRDovetail_7806:HG2_PB_SVrefine2PBcRplusDovetail_4037:HG2_PB_SVrefine2PB10Xhap12_11705:HG2_PB_SVrefine2Falcon2Bionano_7951:HG2_Ill_SVrefine2DISCOVARplusDovetail_4795:HG2_10X_SVrefine210Xhap12_11206;NumClusterSVs=44;ExactMatchIDs=HG2_10X_allpass_2519:HG2_CG_vcfBeta_9163:HG2_Ill_150bpfermikitraw_20298:HG2_Ill_250bpfermikitraw_21522:HG2_Ill_GATKHCSBGrefine_10660:HG2_Ill_GATKHC_25765:HG2_Ill_Krunchall_21860:HG2_Ill_SpiralSDKrefine_6271:HG2_Ill_manta_4415:HG2_Ill_scalpel_15228:HG2_Ill_svaba_20095:HG2_PB_pbsv_16162:HG3_10X_allpass_3095:HG3_CG_vcfBeta_8701:HG3_Ill_150bpfermikitraw_20341:HG3_Ill_250bpfermikitraw_20907:HG3_Ill_GATKHCSBGrefine_10595:HG3_Ill_GATKHC_25614:HG3_Ill_Krunchall_21456:HG3_Ill_scalpel_15510:HG3_Ill_svaba_20266:HG4_10X_allpass_2940:HG4_CG_vcfBeta_10194:HG4_Ill_150bpfermikitraw_20404:HG4_Ill_250bpfermikitraw_21183:HG4_Ill_GATKHCSBGrefine_11022:HG4_Ill_GATKHC_25704:HG4_Ill_Krunchall_22186:HG4_Ill_manta_3744:HG4_Ill_scalpel_14842:HG4_Ill_svaba_20068:HG4_PB_assemblyticsfalcon_9750;NumExactMatchSVs=32;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.096;PBcalls=11;Illcalls=26;TenXcalls=4;CGcalls=3;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=3;HG2count=18;HG3count=12;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-62;DistBack=25118;DistForward=-61;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=16:74809774-74809843;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1370.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:48:./.:3:2:1:3:1/1:0:9:0:29:1/1:0:32:./.:.:.:.:.:.
chr16	75095352	HG4_Ill_150bpfermikitraw_20407	GTTCCACTCATGTTGTTGCAGATTACTGGATCTCACTCTTTTTTATGGGTGAATCGTACTTCATAGTGTATATGTACC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_20300:HG2_PB_HySA_29544:HG3_PB_assemblyticsfalcon_9914:HG4_Ill_Spiral_1264:HG2_Ill_Spiral_1067:HG2_PB_pbsv_16165:HG3_PB_pbsv_15820:HG4_PB_assemblyticsfalcon_9754:HG2_PB_assemblyticsfalcon_9955:HG2_PB_assemblyticsPBcR_9605:HG4_PB_pbsv_16087:HG4_PB_HySA_23613:HG4_Ill_svaba_20070:HG4_Ill_scalpel_14844:HG4_Ill_manta_3745:HG4_Ill_Krunchall_22190:HG4_Ill_GATKHC_25707:HG4_Ill_GATKHCSBGrefine_11024:HG4_Ill_250bpfermikitraw_21187:HG4_Ill_150bpfermikitraw_20407:HG3_Ill_svaba_20268:HG3_Ill_scalpel_15511:HG3_Ill_manta_3598:HG3_Ill_Krunchall_21459:HG3_Ill_GATKHC_25619:HG3_Ill_GATKHCSBGrefine_10596:HG3_Ill_250bpfermikitraw_20910:HG2_Ill_svaba_20096:HG2_Ill_Krunchall_21862:HG2_Ill_GATKHC_25768:HG2_Ill_GATKHCSBGrefine_10662:HG2_Ill_250bpfermikitraw_21525;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20300:HG4_Ill_svaba_20070:HG4_Ill_scalpel_14844:HG4_Ill_manta_3745:HG4_Ill_Krunchall_22190:HG4_Ill_GATKHC_25707:HG4_Ill_GATKHCSBGrefine_11024:HG4_Ill_250bpfermikitraw_21187:HG4_Ill_150bpfermikitraw_20407:HG3_Ill_svaba_20268:HG3_Ill_scalpel_15511:HG3_Ill_manta_3598:HG3_Ill_Krunchall_21459:HG3_Ill_GATKHC_25619:HG3_Ill_GATKHCSBGrefine_10596:HG3_Ill_250bpfermikitraw_20910:HG2_Ill_svaba_20096:HG2_Ill_Krunchall_21862:HG2_Ill_GATKHC_25768:HG2_Ill_GATKHCSBGrefine_10662:HG2_Ill_250bpfermikitraw_21525;NumExactMatchSVs=21;ClusterMaxShiftDist=0.025641;ClusterMaxSizeDiff=0.025641;ClusterMaxEditDist=0.0512821;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=-77;DistBack=20878;DistForward=16764;DistMin=16764;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=77;REFWIDENED=16:75095353-75095506;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1371.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:66:1/1:3:24:2:14:1/1:0:12:0:10:1/1:0:31:./.:.:.:.:.:.
chr16	75429831	HG2_Ill_manta_4416	GGAGAAATGTTTAATCCCTGCCTAGGCTTTCCAGGTTAACGAAAACACCTGAGGAATGTTGTTTAAATGCAGTCCATCTCCCCTCCATGACTTCTCAGCATGAAACACACTGCAGCAGTCAATACTAAATCTCCATGCTGGTTTACTGATGTGAAGGCTGAAAAAGGCCCTCACACTGCACCCCACATGCAGATTAGCACTCAGCCTTGAAAGCTGAGATGGGGAGATGGAATACTGGGAATATAGGTTATAGAATTGGGAAATAATGCCTAGGTTGGCACTATTTCAAGGAGAAAAACAAGAGTTAAAAAAAAAAATTTGAGGAGACCAGGCACAGTGGCCCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCGGACCACGAAGTCATGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCAGGCATAGTGGCAGGCGCCTGTAATCACAGCTACTAGGGAGGCTGAGGCAGGAGAATTGCCTGAACCCAGGAGGTGGAGGTTGCAGTGAGCTCAGACCACGCCACTGCACTTCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAATAAATAAATAAATTGAGAAGACTCTGCAGAAGGCTCCTGTTTTATATCCAAAACAACCCAAAGATGAAACAAAAACTGGCTAAATTAGCAATAATTTGGGAATGGACGAAAGCAACATGACTGAGAATTTTGTCTAACTTCAAATCTGAAAAAATTATCTTCACTAAAACTGAGTCCTAAAGGCTCAAATAAAGGTATTTATGGTACCTGAGAATTCAGATAAAGAGAGAAA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_16166:HG3_10X_allpass_3096:HG3_PB_assemblyticsfalcon_9921:HG2_10X_allpass_2520:HG4_PB_pbsv_16088:HG3_PB_HySA_24511:HG2_PB_SVrefine2PB10Xhap12_11708:HG2_Ill_breakscan11_2312:HG2_Ill_SpiralSDKrefine_6277:HG2_Ill_SVrefine2DISCOVARplusDovetail_4802:HG2_PB_HySA_29552:HG3_PB_pbsv_15821:HG4_Ill_manta_3746:HG4_Ill_GATKHCSBGrefine_11025:HG4_10X_allpass_2941:HG3_Ill_manta_3599:HG3_Ill_GATKHCSBGrefine_10597:HG2_Ill_manta_4416:HG2_Ill_GATKHCSBGrefine_10663:HG4_Ill_MetaSV_1891:HG3_Ill_MetaSV_1946:HG2_Ill_MetaSV_1829:HG4_PB_HySA_23617:HG3_PB_HySA_24510:HG4_Ill_SVrefine2DISCOVARDovetail_11384:HG3_PB_SVrefine2Falcon1Dovetail_9981:HG3_Ill_SVrefine2DISCOVARDovetail_11586:HG2_Ill_SVrefine2DISCOVARplusDovetail_4801;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10663:HG2_Ill_manta_4416:HG3_Ill_GATKHCSBGrefine_10597:HG3_Ill_manta_3599:HG4_10X_allpass_2941:HG4_Ill_GATKHCSBGrefine_11025:HG4_Ill_manta_3746;NumExactMatchSVs=7;ClusterMaxShiftDist=0.140774;ClusterMaxSizeDiff=0.140774;ClusterMaxEditDist=0.143492;PBcalls=10;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-842;DistBack=11048;DistForward=31370;DistMin=11048;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=263;REFWIDENED=16:75429642-75430746;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1372.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:70:./.:0:0:0:44:./.:0:8:1:3:1/1:0:39:./.:2:29:.:.:.
chr16	76294912	HG4_CG_vcfBeta_10199	CACAAATGATAGCATTTCCTTCTTCTTTTTTTTTTTTTTTTTTGGAGTCTTGTTCTGTTGCCTGGGCTGGAGTGTAGTGGTGTGATCTCAGTTCACTGCAACCTCTGCCTCCCAGGTTCAA	C	20	PASS	ClusterIDs=HG4_PB_HySA_23623:HG4_Ill_Krunchall_22199:HG3_Ill_Krunchall_21473:HG2_PB_SVrefine2PB10Xhap12_11711:HG2_PB_HySA_29558:HG4_PB_SVrefine2PBcRDovetail_8082:HG4_Ill_svaba_20078:HG4_Ill_scalpel_14852:HG4_Ill_MetaSV_1892:HG4_Ill_GATKHC_25717:HG4_Ill_GATKHCSBGrefine_11026:HG4_CG_vcfBeta_10199:HG4_10X_allpass_2942:HG3_PB_SVrefine2Falcon1Dovetail_9985:HG3_Ill_svaba_20282:HG3_Ill_scalpel_15521:HG3_Ill_SVrefine2DISCOVARDovetail_11593:HG3_Ill_MetaSV_1948:HG3_Ill_GATKHC_25638:HG3_Ill_GATKHCSBGrefine_10601:HG3_10X_allpass_3098:HG2_Ill_svaba_20106:HG2_Ill_scalpel_15238:HG2_Ill_breakscan11_2313:HG2_Ill_SpiralSDKrefine_6279:HG2_Ill_MetaSV_1830:HG2_Ill_GATKHC_25777:HG2_Ill_GATKHCSBGrefine_10664:HG2_CG_vcfBeta_9171:HG2_10X_SVrefine210Xhap12_11214:HG4_PB_pbsv_16091:HG3_PB_HySA_24522:HG3_PB_assemblyticsfalcon_9929:HG3_PB_pbsv_15827:HG2_PB_pbsv_16169;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11214:HG2_CG_vcfBeta_9171:HG2_Ill_GATKHCSBGrefine_10664:HG2_Ill_GATKHC_25777:HG2_Ill_MetaSV_1830:HG2_Ill_SpiralSDKrefine_6279:HG2_Ill_breakscan11_2313:HG2_Ill_scalpel_15238:HG2_Ill_svaba_20106:HG3_10X_allpass_3098:HG3_Ill_GATKHCSBGrefine_10601:HG3_Ill_GATKHC_25638:HG3_Ill_MetaSV_1948:HG3_Ill_SVrefine2DISCOVARDovetail_11593:HG3_Ill_scalpel_15521:HG3_Ill_svaba_20282:HG3_PB_SVrefine2Falcon1Dovetail_9985:HG4_10X_allpass_2942:HG4_CG_vcfBeta_10199:HG4_Ill_GATKHCSBGrefine_11026:HG4_Ill_GATKHC_25717:HG4_Ill_MetaSV_1892:HG4_Ill_scalpel_14852:HG4_Ill_svaba_20078:HG4_PB_SVrefine2PBcRDovetail_8082;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0585774;PBcalls=10;Illcalls=20;TenXcalls=3;CGcalls=2;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=3;CGexactcalls=2;HG2count=12;HG3count=12;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-120;DistBack=32307;DistForward=-120;DistMin=-120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=16:76294913-76295032;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1373.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:29:0|1:48:1:4:26:1|0:0:22:35:0:0/1:26:27:./.:.:.:.:.:.
chr16	76539134	HG2_PB_SVrefine2PBcRplusDovetail_4042	ATACACGTTCCATTTTACTGTGGTGTACCCACAATACACAGTGGAATACTACTAAACAATTAAAAAATAGACTATTGATAACGTGCAACAACATAGATGAATCTCAACTGCATTACTCTAAGTGAAAGAAGCCAGACTAAAAAGCCTACATGCTTTGAATGATTCAATTTCTAAGATATTCTGGAAAAGTCAAAACCATAGGAACAGAAAAAGGATCTCTGCTGCAAGAACTTTGAGGTGAGAGGAATTTTACACAGGGGTACAAGAAAACTTTGTCAGGTGAACAAAATGTTCCATATCTTGAGGGTGGTGGTGTTTTTATGGTTTCAGGTCCTTTTCAACTTCTAGAGCTACACACAAAAACAGGCTGAGTTGTACTCTATATAAATTACCATAACATTAATATATTTTAATAAGTAATAAATGATGTCTTATTCAACACATCTGACTGAAAAACAAAACAAAAACGTTAATAACAGTTTGCATAGCTATACTTGCTTAATTTTAAGAATTGGAGGCTGAGTGCAGTGGCTCAAACCTATAATCCCAGGGCTATAGGAGGTCAAGGTGGGAGGATTGCTTGAGACTGGGAGCTCGAGGCTGCAGTGAGCTATGATTGCACCACTGCACTACAGCCTGAGCAGCAGAGTGAGACCTTGTCTCTTACAAAACAAAATTGGGTCATCAAAACAAACAGAGAAACAACCGACCACTAGAAGTAAATTCATGGAACAGTAAAGATTTCAGTAATATGGATATTCTCCAATTCTCCAGCACATTTCTGGAATCGTGCTGAATATGTTTCTAACTTATATTGACTTTAGAAACTTTAGAAAAAGAGTCAAAGGAAAGAATCAAGGGGAAACATCTGGGTTTATCAGTTAGTAGAAAAGTCATGAGTAGGAGGAGTCACCTATATATTTCCTACGTAATCAGCCTGCCAAGAGCAGTGGGAACGTATTTATTTTTGAGGAACCATCCAAAGTCTTTTAGACCAACAGTTCCTCCACTTTAGCATGTATAAAAATTACTTGGAGAGCTTGTTGTAGCACAGATTTCCACTCCTTATCCCAGAGACTGTGATTCAGGGGGTGTGGGGGTAGGAGAATCTTTCCTTATCTCCCTCCCTCCCTTCCTCCCTTCCTCATTTCCTTCTTTCCTTCTTTCCTCCCTTCCTCCCTTCCTTCCTCCCTTCCCTTCCCTTCCCTTCTTCCCTCCCCTTCCGCTTCTCTTCCGTTCCTTTTTTTTTTTTTTTTTTTTTTTTGACAGAATTGCCCTCTGTTGCCCCGGCTGGAATGCAGTTGGCTCATTGCAAACTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTCGGATTACAGGCGTGTGCCACCAGGACCAGTTAATTTTTGTGTTTTTAGTAGAGACAGGGTTTCATCATGTTGGCCAGGCTGGTGTCGAACCCCAGACCTCAAATGATCTGCCCACCTCGGCCTCCCACAGTGCTAGGACTACAGGCATGAGCCACCCCACCTGCCTGGGTATGAGAATTGCTAACAGGCTTCCACATGCTGCTGCCGGTCCATGGACCACTCCATGTAGTGCTGCCCCCAGCCAGTGAGGTTCACAGGCTGGTACTGGTCTGCACATTCTTTGCTACCATTCTGTGAGGAGGCTAGTACAAAAATATAGAGTATTTCAGAATGACTTCTGCCATTTGGACAGAGTAATTTATGTCTGTTGGACATAATAGTAATAAAAAATGGACTGGAGATAGTATTTTGTATACCTTTGCTTTTCCCATTCATTTTTCTAGCAATTTACATTTTTAATTTTTAATTTTAAAAATGTAAAATTTTCGTGGGTACATAATAGATGTATATATTTATGGGATACATGAGACATTTTGTCACAGGCATGCAATGTGTAATAATCACATCATGGAAAATTGGGTATTCACCCCTTTAAGCATTTATCCTTTGTGTTACAAATAATCTAATTATACTATTTTTGTTATTTTAAAATGTACAATTACATTATTATTGACTGTAGTCACCATGTTTTGTCGTCAAATACAAGGTCTTATTCTTTCTAACTATTTTTCTGTACCCATTAACCATCCCCACCTCCTACTGGCCTCCCATTCTCTTTGCCAGCCTCTGGTAATCATCCTTCTACTCTTTGTCTCCATGAGTTAAATTGTTTTCATTTTTAGACCTCACAAATAAATTAAAACTTGCAATGTTTGTCTTTCTGTACCTGGCTTATTTCACTTTACATAATGACCTCCAGTTCCATCCATATTGTTGCAAATGATGGATTCTCATTTTATATGGCTGAAATAAAAAGAGGAAAAAAAAGCACATTTTTCTATATAGGTAGTTTAAGACTCACAGCTCTAGGTCAAAGGTTGGGTATGAAGTGGACCAATGGTGCTGACATAGGGCCTGCCCAAGTGTTCTAACTGTAGTTGCAGTATGTTCAGAACCAGAAACAGAGTTTCAGAGTAGAAGCCTAGGCATTCATACACAGGGTTAAACCTACTTTCTTGACACACAGCAAGAAGAAGTCTACAGAGACTTTGTGCTACTTCAGTGAATCTTGCAACACAAAGGGAGTTCCTGGACCACGATGGCATCTGGCTCTACGTCCTTGTCACTCACTCTCCCTTATCTGCAAAATCTCCCTAATTCTTTTACCAAACCCTTTCACACTCAGATTAAAACTCTTCCACCATGATTTCTAGATGACCTAGTCATTCTGCGTTCTCAAAACATGTTTAGCATATTACAAAGATATCTTTCTCATACTGGCTTTTAATTATTTTTGAGCCCCTCAAGAGCAGGGTACATTCCTCATTTATTCTTGTGTTCCTGATAACTAATGTATTACCTATTGCACAAAAGATAATCAATGAATAACAGTTCATGAAATAAAGAGAATGATTTAATATATGCATGTAAAGAAACCTACAGCTTATGAATTATTAGTAAGAGACATGAATACATTTTTGGTTCTATAAGCAATTAAGTAAATATATACTTTTACTAAAAGGAGTTTAGACTCTATTGAGTTATTGATTCTGATATAAAAATCACATAGTAGAAGAATGTCTAGTTCCATCTAAGCCATTTCTCATCAATATGCCTGAAGTTGTAATAGTGAAAGTACTTTCAAATAAGAATATAATTTTAGTTAATATTAATTTTTTTTAACTTTTCACTCAATACAGTGCCTTTATTAAACTGAAATGATTGCCCCTTCTTGGAAAATAGATTATTTTATGGTCTATTTTGCTTTTTTTTTTTGTTCACTTTTTTATTACCAACCAATAATTTATATGCAAGAAACTTGATCAATGTGAGGGAACAAAAATTGTTTTTAGTACTTTCAAAAGGTTTTCACTTTGGAACCCTGATAGTTGTCAGGACCATGGTATCCTTTTGGGGGAATTTTATACATATGCATACCTTTAGTTAATTGTCTTAAATATTAATGACTGACTTGATACAAAATCATAACTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTGTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCAACCACCACCACGCCTGGCTAATTTTTCTAATTTTAGTAGAGACGTGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCTGGCCAAAATCATAACTTTTTAAAGCTATATAGAAATACCAAAAAAGCAAGTAAAAAAGACACCAAGAATCACATAACTCAGAAATAATGATTAATATCAATTGAATATCATTCCAAATGTTGGTAGATATCTCTAGTGCAGGGCTTCCCAGTCTCACCACTTTTGACATGTGGGCTGGATAATTCCTCATGGTGGTTGAGGACCGTCCTGTGCATTGTTGGAGCTAAGCAGTATCCCTGGTTCCTACCCAAGAGATGCCAGTAGCATCCTTCCTCCAAATGTGACGACCAAAAATGTCTCCAAACATTGCCAAATGTCCCCTGGGTAAAGAATTGCCCTAGGTGGAGAATCACCACTTTAGACAAAATAATTTTAAAAAGAGGTTGAGAAATGAATTTATAAAACTTTATTCATTAAAATTGAGAAAGAAAACACCAAATTTAAGCCAAGATGGCTCATGAAATTTATATATCTAACGAAGTATATTCAACGTAAGTGATCCCGCTAAACTTACAAAAAAAGATTATGCGCGTTTTAAAAGATTGTAGAGTCACTACATTTTATATTAAATGTATTTTTAAATTATAAGCAGCATTTATCTACTGTGAGAAATGGAAAAGCTAGCACTCATTTCTTCTTTCCCCTTCTTTATCTCCCCCTTCCCAGTTTTTGCTAGTTATGCTATTATTTGTATATTGTTACTTTTAAAGGCTAACCACTAGTTCTATTCTCCAATGCTTTTTATTTTGATTAATTTCTTTTTGTCAGTTAGTTGATATTTTACCTTTTTTTTTGTCTTTAGAAAGATTCTTGAGGGTTGCATTTTTTTGATTTTGTATGTGCTTGAGAATATTTGTTGCCTTAGGATTCTAAAACTCTGATGCTTTAACTTTATATTGTCTATTGGGAACAGCTTAATTGACATATAATTCACAGCCTATAATTCACCCTTTTAAAAGTGTACAGTTCAATCAATTTTAGTATATTTAATCATTTTAATGTACTATACAGATTTGAGCAACCATCACCATAATCATTTTGAGGACATTTTTATCACCCCCAAAGTAGACCTGCTCCCATTT	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1949:HG3_10X_allpass_3099:HG2_Ill_tnscope_1743:HG3_PB_SVrefine2Falcon1Dovetail_9986:HG2_PB_assemblyticsfalcon_9969:HG2_PB_assemblyticsPBcR_9620:HG2_PB_SVrefine2PBcRplusDovetail_4042:HG2_PB_SVrefine2PB10Xhap12_11712:HG2_PB_SVrefine2Falcon1plusDovetail_4420:HG2_PB_PB10Xdip_12597:HG2_Ill_SVrefine2DISCOVARplusDovetail_4810:HG2_10X_SVrefine210Xhap12_11215:HG3_PB_pbsv_15829:HG2_PB_pbsv_16171:HG2_Ill_breakscan11_2314:HG2_Ill_MetaSV_1831:HG3_PB_assemblyticsfalcon_9930:HG2_10X_allpass_2521;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11215:HG2_Ill_SVrefine2DISCOVARplusDovetail_4810:HG2_PB_PB10Xdip_12597:HG2_PB_SVrefine2Falcon1plusDovetail_4420:HG2_PB_SVrefine2PB10Xhap12_11712:HG2_PB_SVrefine2PBcRplusDovetail_4042:HG2_PB_assemblyticsPBcR_9620:HG2_PB_assemblyticsfalcon_9969:HG3_PB_SVrefine2Falcon1Dovetail_9986;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0267586;ClusterMaxSizeDiff=0.0267586;ClusterMaxEditDist=0.0267586;PBcalls=10;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-4891;DistBack=9129;DistForward=4534;DistMin=4534;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=16:76539134-76544025;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1374.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:50:82:./.:24:19:19:22:1|0:0:33:80:0:0/1:64:13:0/1:382:187:4904:.:.
chr16	76548560	HG4_Ill_Krunchall_22202	TATCTCCAGCCAGATTTTATTTTCTTCATTTTTATTTTGCTTATATTGATTCCTATTGAGGTTAATAAATAGTTGAAAACAATAATAGATGTGCTAAAAAG	T	20	PASS	ClusterIDs=HG2_Ill_Cortex_3238:HG4_PB_assemblyticsfalcon_9769:HG4_PB_SVrefine2PBcRDovetail_8083:HG4_PB_SVrefine2Falcon1Dovetail_9969:HG4_Ill_svaba_20080:HG4_Ill_scalpel_14854:HG4_Ill_manta_3747:HG4_Ill_SVrefine2DISCOVARDovetail_11391:HG4_Ill_Krunchall_22202:HG4_Ill_GATKHC_25719:HG4_Ill_GATKHCSBGrefine_11027:HG4_Ill_250bpfermikitraw_21198:HG4_Ill_150bpfermikitraw_20417:HG4_CG_vcfBeta_10203:HG4_10X_allpass_2943:HG3_PB_SVrefine2Falcon1Dovetail_9987:HG3_Ill_svaba_20284:HG3_Ill_scalpel_15522:HG3_Ill_manta_3601:HG3_Ill_SVrefine2DISCOVARDovetail_11596:HG3_Ill_Krunchall_21476:HG3_Ill_GATKHC_25640:HG3_Ill_GATKHCSBGrefine_10602:HG3_Ill_250bpfermikitraw_20925:HG3_Ill_150bpfermikitraw_20359:HG3_CG_vcfBeta_8707:HG3_10X_allpass_3100:HG2_PB_pbsv_16172:HG2_PB_assemblyticsfalcon_9970:HG2_PB_SVrefine2PBcRplusDovetail_4043:HG2_PB_SVrefine2Falcon2Bionano_7956:HG2_PB_SVrefine2Falcon1plusDovetail_4421:HG2_Ill_svaba_20108:HG2_Ill_SpiralSDKrefine_6281:HG2_Ill_SVrefine2DISCOVARplusDovetail_4811:HG2_Ill_Krunchall_21874:HG2_Ill_GATKHC_25779:HG2_Ill_250bpfermikitraw_21536:HG2_Ill_150bpfermikitraw_20308:HG2_CG_vcfBeta_9173:HG2_10X_allpass_2522:HG2_10X_SVrefine210Xhap12_11216:HG3_PB_assemblyticsfalcon_9931:HG2_PB_assemblyticsPBcR_9621:HG3_PB_pbsv_15830:HG4_Ill_Spiral_1265:HG2_Ill_Spiral_1068:HG4_PB_pbsv_16093:HG4_Ill_Cortex_1325:HG3_Ill_Cortex_1377;NumClusterSVs=50;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11216:HG2_10X_allpass_2522:HG2_CG_vcfBeta_9173:HG2_Ill_150bpfermikitraw_20308:HG2_Ill_250bpfermikitraw_21536:HG2_Ill_GATKHC_25779:HG2_Ill_Krunchall_21874:HG2_Ill_SVrefine2DISCOVARplusDovetail_4811:HG2_Ill_SpiralSDKrefine_6281:HG2_Ill_svaba_20108:HG2_PB_SVrefine2Falcon1plusDovetail_4421:HG2_PB_SVrefine2Falcon2Bionano_7956:HG2_PB_SVrefine2PBcRplusDovetail_4043:HG2_PB_assemblyticsfalcon_9970:HG2_PB_pbsv_16172:HG3_10X_allpass_3100:HG3_CG_vcfBeta_8707:HG3_Ill_150bpfermikitraw_20359:HG3_Ill_250bpfermikitraw_20925:HG3_Ill_GATKHCSBGrefine_10602:HG3_Ill_GATKHC_25640:HG3_Ill_Krunchall_21476:HG3_Ill_SVrefine2DISCOVARDovetail_11596:HG3_Ill_manta_3601:HG3_Ill_scalpel_15522:HG3_Ill_svaba_20284:HG3_PB_SVrefine2Falcon1Dovetail_9987:HG4_10X_allpass_2943:HG4_CG_vcfBeta_10203:HG4_Ill_150bpfermikitraw_20417:HG4_Ill_250bpfermikitraw_21198:HG4_Ill_GATKHCSBGrefine_11027:HG4_Ill_GATKHC_25719:HG4_Ill_Krunchall_22202:HG4_Ill_SVrefine2DISCOVARDovetail_11391:HG4_Ill_manta_3747:HG4_Ill_scalpel_14854:HG4_Ill_svaba_20080:HG4_PB_SVrefine2Falcon1Dovetail_9969:HG4_PB_SVrefine2PBcRDovetail_8083:HG4_PB_assemblyticsfalcon_9769;NumExactMatchSVs=41;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.0375587;PBcalls=13;Illcalls=30;TenXcalls=4;CGcalls=3;PBexactcalls=9;Illexactcalls=25;TenXexactcalls=4;CGexactcalls=3;HG2count=18;HG3count=15;HG4count=17;NumTechs=4;NumTechsExact=4;SVLEN=-100;DistBack=4534;DistForward=7870;DistMin=4534;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:76548561-76548661;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:34:./.:15:21:17:8:0|1:38:0:0:32:0/1:42:23:./.:.:.:.:.:.
chr16	78068248	HG3_PB_HySA_24532	GCTCCCCAAACCTTACCAGGAAGCTGATTCTAATCTTCAGAGCAGTGCTTCTCCCCAAACCTTACCAGGAAGCTGATTCTAATCTTCAGAGCAGTGCTTCTCCCCAAACCTTACCAGGAAGCTGATTCTAATCTTCAGAGCAGTGCTTCTCCCCAGACCTTACCAGGAAGCTGATTCTAATCTTCAGAGCAGTGCTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11221:HG3_Ill_Krunchall_21495:HG2_PB_SVrefine2PB10Xhap12_11716:HG3_Ill_Spiral_16706:HG2_Ill_Spiral_1069:HG3_PB_pbsv_15836:HG2_PB_pbsv_16177:HG2_Ill_MetaSV_1834:HG3_PB_SVrefine2PBcRDovetail_7816:HG3_PB_SVrefine2Falcon1Dovetail_9990:HG3_PB_HySA_24532:HG3_Ill_MetaSV_1952:HG3_Ill_GATKHCSBGrefine_10605:HG3_10X_allpass_3101:HG2_PB_SVrefine2PB10Xhap12_11715:HG2_PB_SVrefine2Falcon2Bionano_7959:HG2_PB_SVrefine2Falcon1plusDovetail_4424:HG2_Ill_SVrefine2DISCOVARplusDovetail_4820:HG2_Ill_GATKHCSBGrefine_10667:HG2_PB_SVrefine2PBcRplusDovetail_4046:HG2_PB_assemblyticsPBcR_9629;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11221:HG3_PB_SVrefine2PBcRDovetail_7816:HG3_PB_SVrefine2Falcon1Dovetail_9990:HG3_PB_HySA_24532:HG3_Ill_MetaSV_1952:HG3_Ill_GATKHCSBGrefine_10605:HG3_10X_allpass_3101:HG2_PB_SVrefine2PB10Xhap12_11715:HG2_PB_SVrefine2Falcon2Bionano_7959:HG2_PB_SVrefine2Falcon1plusDovetail_4424:HG2_Ill_SVrefine2DISCOVARplusDovetail_4820:HG2_Ill_GATKHCSBGrefine_10667;NumExactMatchSVs=12;ClusterMaxShiftDist=0.262108;ClusterMaxSizeDiff=0.262108;ClusterMaxEditDist=0.262108;PBcalls=11;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-196;DistBack=23886;DistForward=-144;DistMin=-144;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=54;REFWIDENED=16:78068249-78068498;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:27:0|1:27:0:3:27:1|0:0:14:26:1:0/1:43:15:./.:.:.:.:.:.
chr16	78371638	HG2_10X_SVrefine210Xhap12_11223	ATGAAATATCCCTGTACTCCAAGATGCCTCCAGCAATTATAATTGAATCTTGAAGCTAGAGTTTCTTGGCTATCCTATTTCCCTTTTGTTTCCACCATGAAGAAGTGGAGAGCCGTGTGACCTCAGTGGTAGAGCTGATGTAGAAGCGCCCTCTCTGTTCCTGGCAGTGCCTGTCCTGCTAACCTCGTGTCTCTTGCTGGGGTCTTCATCAGTAAGAGACCTCACAAGATGCTTTATCAGGTCACTTGGCAACCAAGCTGATGAGGATAGCAGTTTCTTTTGTTCTTTTAAAACATATATAAAATTATTTTTATCAAACATGACAGATCAAAAGCCTTCTGGAAAGGAGAGATGGTAACTAATTTAGGCAGTGTCTTTTGCTTTCACATGGTGTACCCAGTACTATTAATATGAATTTATCACATGGAAACAAACTTTTAAAAAAATTAATTTTGTGAATTAAATAAAGCAGCATGCAAATTTACTATCGTATTCAGCAACCAAAATTTTATCACTTGCCTGATACTGCCTAGTGAGCAGGTGGAAATGTAGACACCAACACCCTCATGGATTCCCAGCTGCTGAGAGTTTGAATAGTATGTGAAGTCTGTAGAGACAAAATTGTTGTTTTCCCCAGTTGTAAAGTGTGCAATATTATCCTTGCAAAATTGTCTGTTTATTTTTTTTGCCCTTTTGGGGGACAAAATGTCTTTATGTTAAATTGTTTTATTATTGTTATCTTTATGGAGTTAAGGGCACATAAAATATTCTTACAGAGAGAAATTCTGTAGTTTCCACAAGTAACCAGAGAATTGTTCAAGGCAGAGAATTATTTTTTCAATGCCTATTTTCTCCTGAATTTTCTGACGGAGTTAGAGATAGGAAAATACCATAATCTGCTATAAATTCAGTTGAAAAATAGAAATAGTGAGAAATCCAGGTTGTGCTCTGTCGTAATTTAAGCCTAATATGTGATTGTCTACATGTTTACAAGTTACCGCCTTTTTATTTCTTCTCTTTTTCTGTTTTCTTCTTCCATTTTTATGTTTTGCTATGCCATTCATTCATTCTATTCTTTTCATTTCTTTTTCTTTTTGTAAAAATTGTACAGAGTTTAAAGTTAGTCAGGTATGTCTATTAAATTTTTACGTAAAAAGTTAAAGCAGCCCTCAGCATCAACTTCTTCTTCATTTCTAACTCATTTAGTGAATTCAGTTGGTCTTTATATATGTAGCTTTAAGTAATTGCATGTAAACTGTTACTTCTTCATTTTCTAGTCTTAGATATTATCTGTAGGTTTTTCAATAAGAAGGAAATTTAGCTTCCTTCTACTTTGGTGCCCCATGATGATGTGCATCTTTTTTATTTCTGCATCATATCCATATAGTGATATCATGTATAATGATGTTTAAGAAGACAGTTTTTTTTGTTTAAATTGTTATAAATAAGTAAGTGTATGCACCACTATGCCATGTAGCATATCAAGATTATTTTTCTTTCCTGCACCTTATTTTTTCCCTGGAGTTAATACTCATCTTTTTTTAGAAATTTGCTGAGTTTGTGATGTACCTATCATTCAACCTCAAACTTTCATGTGATTGTCTAAATCTCAGTTCCTTTTATTAGAAAAAAAAAAAAAAACAACTCCCCTGGAGCCTTTGTACCTTCTGCAGTTTGGGGTTGTTGTCCTTTTTGCTTGGTGCACAGGAATACTTGGTGATGTTCTTTTTAAAACTGCCCTCACATTGTATCCTGGAAAGTTCATTTACCTGTACCCGGAGTTGGAACTTCTCTTCCACATCTTTTCCTGTATTGGTTTGGTTATTGTTTTGTGGGAGCATGTCTTGTAGTAGCTTTCTGAAAAAGGATGATAGAATATGTGTGTGTGTCTGTGTGTGTGTATTTCAGGTTTCAAAATGTTTCTGTTCCATCCTCATTTTATTCATTGTTAGGGATAGAATTACAGATTTAAAATCAATTTTGCTTCAGAGTTTTAAATTCTATTTTGTGGCTTTCTGTGTTGTTCTCGGGAAGTACAAACCCTTGTGACCGCTGTTCTCTTTCATTTCTATCTGCTTCTCTCTTGGGAGTACAATGGGAGGCATATCATCAACCCCTTGCTGCTATCCAAATAGGAGACTGTTCCCTTTCAAGAGAATTTTAGGTATTCAGATCCTAGACCTCCCAGATGGCCTCATAAGTATTTTTATCCTCTATTTATCTTTGTCTTTGTGTTACTTTCAGGGATAGTTCTTCTAGTCTTTCCATGGATTTGGTGGGGGGGGGGGGGACGTTTCTATTTCCTTTATGTTTGATAACATTCTATTCTTGTTTCATGGATGATGTTACTCTTTTAACTCTCTGATGTTAATGATAATTGTTTTAATTTTTCTTTTCTGTTTAGTTTCTATCTTCTCAAAATTGTTTTCATTTCTTTTGGTAATTGTGTTTGATGATAGTCTTTTTTTTTTTTTGAGATGGAGTCTTACTGTGTCACCTAGGCTGGAGTGCAGTGGTGTGATCCTGCCTAACTGCAACCTCCACCTCCCAGGTTCAAGTGACTGTCCTGCCTTAGCCTCCCAAGTCGCTGGGACTACATGTGCGTGTCACCAAGCCGAACTAATTTATTTTTATTTTTTGTATTTTTAGTAGAGATGAAGTGTTTACCCTGTTGGCCAGGCTGGTCATGAACTCCTGACCTCAGGTGATCTGCCCATCTCAGCCTCCCAATGTGCTAGGATTACAGGCATGAACCACCACACCTAGCCTCTTGATAAAGTCTTTCCCCAAATGTTCTGATCTGTGGATGTCTGTTTCTATCTAAGTAGAATTCAAAGTTACTGCTGCCAACTCTTAGCACATGGCCACGGCCAGTTAACTGTGGACTCCTCTGAAGGATGATCTGGCTGGACTATTTTTTGGGAAAACCACTGTGTTTGAATGTTTGCATGTGTCCTGTTGGCAGAACAAATATCCCACAGAAGGATCTTCTTATCTTCTGCTTGGGGAAGGTGTAGCTCTGACTGCTAGAGTTCTAGAGCCAAGTGAGGGGGAGAGTTCTGAGTCTCTGCATTCAGTAGGTAAACATTTACAAAGTCTGTGTTTTCAGTATCATGCCACTGTTCTCACCTGTTTATGTTCTCTTCTGATAATAAACTTCTGTCATTTTTCTGGAGTTATGAAATGATGGTATCCTGCTGGGCTGAGTGGGGAGGGATTCTCAAGCTGTACATAGCTGACACACAGGTTTCTAAAAGGTTGTCTTTCAACCCCATTTTCAGAAGTACCAGGTTCCACATTTTCTGAGCCTTTGCTGGCTCTCTGATAGGAATTGTGTTACTTCTCAGCTGTCCCCATGGCTAGCTTAAGACTCAGCTCTCTTAAGTCACTTCCTAGTTGTCCATCTGCTTTCCAGCATCCAACTGTAATTTTTTTTTTTTTAAGAGAAATGAAGTCTCATTTTGTTTCCCAGGCTGGTCTCACTGTAATTCCTGGGCTCAAGTTACCTCTCACCTTGGCCTCCCAAACTGCTGGGATTATAGGCATGAATCGCTGTGCCTGGCCTCAACTTTAAATTTTTATATTGAATAATCTTTGATTTGTATTGTCATGTTGTTTTATAGCAGTTACTGCTGTTTTAGTGTGATTTGGGATGAAAATTTTAAAAAATCAATATGTATAATCCACCATCTTTGTTCCTTTTATTTTTATGTTACTCATTCTTTTAAGCTTGTCTTAGACGTGAGTATTATGTTTTATTTTGCTGGGAGAACAATTTGGGAAAATTTGAGCAGCAAACCATAAGTTTCTTGGTGTCTGTGTACTTGGAGCTCTGAATCACTATTGTCACTGAGGGAGTGGACAGGAAGTGATGCTGAGATAAGTCTAGATGGGATAGGTGGGCAACATGCAGGAGAAACCTCCTGGGAAAGGTGAGCAAGAGCACACAGGTGAGACATAGCATCGAGTGTGGAAACCTCCATGGGTGGCAGGTCAGTGTTGCTGAGGGATGTGGACATGTCTGAGGCCAAATAGATGAGTCCCTATTGGGTTTTGCCTCTCCACAATCTAGAGGAATATTTATGGAAGGTTAACAGGGCATGGTGGTGCACACCTGTAATTCTAGCACATTGGGAGGCTGAGGTGAGAGGATTGCTTGTCTTACAGGAGTTGAAGACTAGCCTTGGCAACATAGCAAGACCTCATCTCTACTTGGAAAAAAAAAATTAGCTGGGCATGGTGGTGCTCACCTATAGTACCAGGTACTTCGGAGGCTGAGGCAGCAGAATGGCTTGAGCCTGGGAGATCAAGGCTACAGTGAGCTGCAATTGTGCCACTGCACTCTAATTTAGGCAGCAGAATGAGACTATGTCTCAAGAAAATGTTCAAGAAGAAATACAAACTATTGAAAAAGGAAGGCTGAATGCTTTATCAGAAAACTGTATTTGGAGGGGACCTTTCTGGGGTCTTTTAGTCAGGGTACATAAGTGTCAGCTGCTACGACAAACAACTTGCAACGTCTCATTATCTTCATACAACAAACGCTGATTTGTTCCTTTCATTACATATCCAGTGTGAGTTGGCTGGAAGGTCCACCCTACACAACCACTCGTGAAGGCAGACTTGAAGGGGACTCCACTGTCTTGGAGCTACACTCTAAAACAAATAGCCTCCAAAGTCAAGGACTCTGTAACAGGATGAAGCAGCATTTTTTATGGGCAGGTTTGCACGTGGCATTTGTTGCTTCCATCAACATTCCACTGGCGAGAGTGAGTCCCTGGCCCCTATGTAATTATGAGGGAGGCTGAGATGTGAGAAGCACATGGGTGTTGGGAGAGCACTAAAGGTCTCTAGCCCAGAAGCATGACTTCCAGCCAAGTGAGACAGGGAAGCCCAGAAAAATGTGTCACAGAACTTATGGCATCAGAATCTGATTCCCAGGCATGCTTTCCACCATATGCATAGACATTTGCACCCCAGGGATAGCACCATTACTCCCAAAAATTGCAGGTTTGAAAGGGTACCTAAAAACAAGCCACCAGATTGTCCCATTCCACTATCATTCTGCCATCAACACCGAGGTGTCGGAGTAGCAGGAGAGCCACATATTTCTTAGTGAGGGGACCCAGAATGATCCCTTTTGTGCTAGAGGATCTGAGTTCATTTCATGAAACTGAAGCATCTTCTTGGAGATATAAGCTCACCTTGGGATAGGCCCTTGCAGATGACAATAAAGGTATTTTGGCACATAAAAAAACTGCTCAGCACACCTTGTATTTGTATTTCCTTTGACGTGAACCATGGCCATCCAGTAGGCCACGCAACATTCCCACTGCCATGTTGGCTTGTTTTTCTTTTGTTTTCTTGTCAACATAAGCCTCATGAGACAACAGCAGGATGCAAGATTGTACAATGACACCATGACTCTGCTTTCTGGGTGTCCTCTGTGGGCTCTCAGCAGTGTCCCCGATGTGGAGGGTCTTCTTATTCTGTGTGTGTGCCCTCTGCTGTTGAAAGTTGCCTGTCACCCATGATGCTGTGCTGATTGAGCAAACTAATCCATAACCCACCGCCACGTTCCTCGCCTACTTGCTTCTAGGCACATTAAACGGTCAGTGCACAGGTCCTCATTTTTCTCATGCTTCCATTTCCATATTCTCAATCAATCACTGATGGCCAGCTGTCAACAGGCACCATTTTTGGTGGGACCTGAAGATGTATATCCCTTGTTTTCAGATTCCTCGCCTCTCATCATGTAAGGTGATGCTCTGAGCTGGGTCTTAAAGCTTCTGGGCACAGCCCCCCTTGAGTCTTCATTATGGCAAATCTAGTGCAGGTGCTGAGAGGCGGTAACTCTTTAAAGGGACAGGATATGGAAACGTGGCTTCATGGACAGTATTTTAGTATATTTCTGTAAATAGCACATGTGCTAGATAGCAGATTTGTGTATGGATATGCACCCGGCTAGGGACCTCTTTAATGGTCATTCATTTGGGAGATGACCTTTGGTTCCTAAACTGGTGGACATACCAAGGACTAAAGGAGTGACTTGCTCTCAGTTCTTTGTCATTCAGCTGCTTTAATATTAATATGACACCCGTTTTGGGCTTGAAAAGTTTTCCTTCTGCTGAGAAATGATGATGGTGACAATGATGACAATGACGATGACCCTTGGTTGGAGCAATGTAGTCTAAATGTGGTTGCATCATCTTCTTTCTTCCTTTGCCTTCCTCCCTTGCTCTTTTTCTGCCCCTCATGCCGGCTCCTTCCTCCCACATCACCCCACATTTTTTTTTCTTTCTCCTCACCATCAAGAAATGTTCCAGAATGCCATTATTCTTCGTCACCACGGTCAGGTATATCATCCTAAGGGCAGAGGGTGAAGGTGCGTAATTAGTGTTTCACCAGACTGAGCATCATCCTCGGGCAGGTGCAGGGGAGAATGGCTGGTATTTATGAGTGAATGGCAGCGTTTTGACAGGATGATGAATAAATATGCTGGGCCCAGAGGACTCCAGGTGATAAGCATTTCTTTGTGGTCTGGTAAGTGATAGCACCCATTGCTTAATTTCTCTAAAATCTGCATTTGTCAATTTTGTATTTTTTTATTTGAAAGGTATTTGCTTAAATAAATAGGCCATATAAATCTAGCTCCCAATGTCCATTTTCAAATGATTTCCAGCAAGGAAGATGGAATTACCACGAGGAACCTGTTCTCTTATGTTTCTGCTTAGATGGCTGGGTCTATACCAGGGTTTATTTAAATGAACACAGGAAATGCCATTCACCTTTACCATGAATGGGAATCTTTGCCTGTGACTCTATCGTGTGAATTAGCAGAGCTTGGCTATTATTCCCCTACTTCGGTAGATACTGGCTGTACAGAAGGGAACCCCAGTTTCAATGAGTACCTATGTGCTGGGCACTTAGCTGGTTTTTACACACATACTTCATTTGAAGGGAAGGAATTGACTGAAAAGAATTCTCCATTCCAACTTCCCAAGTCAGTTGCCATTTGGCCCTGATAAAGCTGTACTTTCTCACTTGTTCCTTATTTAAAATAGAGAAAAGTGCATCAAGCTCTTGTTAATCTGTCAGGCCTTCCTAAGATGTCTGAAGAAGTTAGTTTGGTGAACATGGGCTTCAGGGTCAGACTGCTTGTGTTCCATTCTTGATCCTATCACTTCCTTGCTGCGGGAACTCTGGAAAGTCACTTAACCTCTCTGAGCAAGCTTCCATTTTTCCAGGTGAAAACGGGAGTTTAGCCTAGTCCCCACTTGATAAGATGGTTGTGGAAAGTATTGTGCGTCATGGACCTAAAGTACCTAGGAGATTGTCCTGGATGTCGTTTTCTCATAAAGTTGACTATGGCTATTGGTGGTACTAGTATGACTGTCAAGTCGATCAGGTGGCTGAGGAGCAGTACATGGGGGTATACAGAGTGCAGGCCTCAGAACTGCAGAACATCTGCACAATCTCCAGCAAGCTAACCTCTCTGGACATCGTATTCCTCATCTATAAAAGGGAGACTTCAATCTTATTTAATGGCAAAAGTCACAATTACTTTTGTACCAACGTAATAGAATTAAGTAAAATAAGGCTAGACATGCTGGCTCATACCTTTAATCCCAGCACTTTGCGAGGCCAAGGTGGGCAGATTACTTGAGCCCAGGTGTTGGAGACCAGCCTGAGCACCATGGCAAAACCCCATCGCTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTAGTCGGGTGTAATGGCACACCTGTAGTCCCATCTACTCGGGAGGCTGAGGTGGGAAGTTTGAACCTGGGAAGTCAAGGCTACAGTGAGCTGTGATCCTGTCTCTACACCTCAGTCTGGGTGGCAGAGCAAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAGTAAAATAAAGCATGGGAAGTCCCTTATACAGTTTGTGATATGGGTACACACTCAGTGAAATGGCCATTAATACTGCTGTTCTTAACTCTGAAAGCAGAGTGGGCCATTTGAATGCTCACTTTGATATTTTTTAAAGGAAAAATTTGAGGCATTGACACATGCCTTTTGCTTACTTGCTTGGATTGGTTTGATCAACTTTGTTGCGGTCTAATTTATGTAAAATAAATTGCATCCATTTAAATATACAATTCAATGAGTTTTGACAGATGCACATGCCCATGAAACCAACACGAAAATAAAAAAAATAGAACATTTACATCACCTCAAAAAGATTTCAAATGCCACTTCTGTGGTGTATGACTCTGAGTCCAGACAGCCTCAGCTCCAGGAAAACCCTGGTCTGTTTTCTGTCACTATTGATGAATTTGCATTTTCTAGAATTTTAGATAAGTGAAGTTTTCTAGTACTTGTTCTGCATCTGGTTTCTTTCATTCCACATAATTACCTTGGGATGTACCCATACTGCTGCCTGTATCAGTGGCTTACTCATTGTCATTGGTGAGTAGTACTCCATTGTGTGGAGAAATCACATTGTTTTAAAAATACCTAATTACCTGCTGATAGACATTTGGGTTCTTCCCAGTTTTTAGCTGTTGTAAATGGATACTAATGTGAACGAAGCCACCGTGAATATTGATGCACTAGTCTTTGTGTGGACATATATCTGTTTTATCTTGGGGGATAATACTCTGGAGTGGAATGGGCAGGGTGGTCCGTATAGGGCTATGTATAACTTTTTAAGAGGTTGGCAAATACTTCCCTAAAGTGGTCATCCCATTTTACATTCTTGCCAACAGTGTTTAAGGATCCACTTCCTCTACATCCTTAATAATACTTGATATTATTGGTCTTCTAAATTTTCTGTTTGGGTACATAGTGGTATTTTGTTGTATATTTTTTTTTAATTGTGAAATATGTGAGTATGATGAGTAATGATTTTGAACATGAAAACTATGCTTATTGCTCATATCTATGTTATTTTATTATTTACTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGTCTGGAGAGCAGTGGTGTGATCTTGGTTTACTGCAACCTCTGCCTACTGGGTTCAAGCGATTTTCCTGCCTCAGTCTCTTGAGTAGCTGGTGTTACAGAAGCCTGCTACCATGCCTGGCTAATTTTTGTGTTGTTTTATTTTTATTTTATTTTTTTAGCAGAGACAGGGTTTCACCATGTTGACCAGGCTGGTTTCAACTCCTGACCTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACAGCGCCCGGTGGTCATATCTCTTTCTTGCGTTTTTGTGGGGGTTGGGGTAATAGGTTTATTGAGATATAATTCATATACCACACAGTTTCATTTTTAGTGTATTGACAGGTGTGCAGTCATCGTCACAATCAAGCCATAGCTTCTTTTAAACTTTGTCTTCCTTCTCTTTCTAATTATCTCCTTCCCCCGCCCCCTCCATTCTCTTTCCATCCTTTAAATGTCAGTGTCCCCCACAATTCTGTTGTTGACCCTTTCTCCCTCTGGCCAATGCTCCTTCCCCTGTAGATCATACCCATTCCCAAGATTTCAGTCATCAAATCCATTCCAATATGACTCCTGTATCCATATGTCTAGTTCCAAGTATCTGTCCATGGTGTTGGTCCCAGGTTATTCGCACCTCATATGTCTTTGGCACAGCACTCTTGACAGCTCATAAAGTCACGCTGTTACCCCCACAATGTCCCCCCACATATCATTGCTATCCCTCCTCGACACCCACACCTCTTGCATGTTCCTGAGCTTCTTAGGCGTGTTGCATCTTCCTGACCTTCCCAGTCCGAAGCCCAAGGAGATACTTGATAAATATTCGTCTAATAAATAAATGAACTTGTGTTCTCCATATTCCTTGAAAATATGCTTCACTTTTATCTTTTTAAGAAATTAATTGCATTACTATCTTATTAAAGGTCAAGAAAAATAATTCATATCACTCACTATTCATGAGACTGCTAAATAGTTGCCCTGGCAATTTCTGATTATAATTTTAGAAATATTTCTAACCTCTGGCCTTTTTTCTTATCTCTACTTAAAGCTTTTCTGGAAGGAATTCATTTTCCACTTTCCTTAATGTTCCTTAAATGTTGTACATATCTTAAAAGTGGATTCCTCATAAAACAATATGGACTATGGTCTTATTCTGTTTAACGGTATGAAGGCTCGCCTGAAAGGCCAAGAGTAAGATTCTTTTAAAATCATGCCCAAGTTTTAAAGGAATATAAAACTTTCTCTTTAAAAATATACCTTTCTGCTTCCATCCCCTAACCCACAAAGCTCAAGTCTAGTTTAATTCAAACTTGGAAATAGTTCTTTTATTATTGCTCCCTGCAATGGGAACAGAGCTGAGGCTCCTAAGGTCTAGAGTCAACATGAAAATACCTTTGCTTCTGGGCCATAGCTGTGTTTCTTCTTAACAAGGCAGAAGCCCAGAAGAGACTTCATGTACTGTGACTGTAATAAAGAGGGTTGTAAGTAGAGAAGCTGGAATTTGAAAGGTTACGTACAAGTCAAGCTGCCTCTGTAATGTCACTTATATCCAGGAAAGAGTGGCAAAGAACCATCCCAGCAGATAGCTTGAGGGTGGGAAGGGGGATAGGTTGTTGATAATATGGAATAGGAGAAAAAAGATCATAGAGCCAAAGAGCTCGATACATATACTGATGCGGTGTTTATTTTATTTTAGTTTTTTGAGACAGGGTCTCTGTCGCTCAGGCTGGATTGAGTGCAGTGAATCTTGGCTCACTGTAGCTTTTGCCTCTTGAGCTCAGGCAATCCTCCTGCCTCAGCCCCACCAGTAGCTGGGACTAGAGGCACATGCCACTACACCCAGTTAATTACTACATTTTCTGTAGAGACGGGCTTTCCCCATGTTGCCCAGGCTGGTCTCTAACTCCTGAGCTCAAGAGATCCACCCGCCTCTGCCTCCCAAAGTGCTAGGATTACAGGTGTCAGCCACAGTGCCATGCCCTGATGTGATGCTTAAATTCAGAAATTGGGAAGGAGGGTCAGGTAGCTATAAGCAAAATACAAGAGAAATATAAGAGAAAGAAAGACTTGTATCTGTTGTTAGTGAGTTTTTGTGGTGGTGATACATTAATGGAGGCAACAGAGGGTCAGAAATCAGGGTGGAAAATAGCCCAGCAGAGGGGAAAAGAGGAAGTCTGAACGAGGGCCACATTGCAGATAGAGGCCGGTGTACTGGTCTGCTCAGGCTGCCATAACAAAATACCACAGGCTGGATAACTTGAACAACAAAAATACATTTTCTCATAGTTGTGGAGCCTAGAATTCCAAGGTCAAGGTTCCGGCACAGTTGATGTCTTCTGAGGTCTACCTCGTCTGCTTGCAGACAGCCGCCTTCCCACCGTGTTCTCACGTGACCTAGCCGCTGTGTGCACGCATCCCTGGTTTCTTTTCCTGTGTTCAGATGTCCTCTTCTTTGAAGGACACCACTCAGATTGCAATAGGACCTGCCCTGATAGCCTCATTTTTTACATAATCACCTCTTTATAGGCCGTACCTCCAAATACAGTCACATTCTGAGGTAGTACGGGTTAGGTCTTCAGCATATGAATTTTGGGGAAACAGAATCCAGCTAACAACAGTTGGGGATGAGGCTATAACGAATACCACTGCCTAATGTTTGCACGGGGATATCATGCTTTTCAGAGACCATCTGCATCCTTATCTCACTTAATCCTTGCCCCACCCTTTAGAAGAAGCCAGGAGGAGGTCCTAGTCAGCTGATGTGAGATTACATGGCCCTGACTGTCTTGCCTGGTGCTGCAGGCCACCTTCACAGCCTTGCCATACCTTTTCCCGTTTATCCATGGATTGGTATGAGCCCTAATGGTGCACCCTTCCGACAATCCTTCATCCTTCCCAGACGTTTCATCAGCCAGGTGAAATTTGCAATTGTTTCAGTGATTGAAATTATGCTTGGAGTGCAGGTGTCACCGATGAAACAGCAATGCCTTGCGGTGACAAATTCAGTGTAGAAATAATTTTAGCAAGCCCAGTGATTGGAAAACAATGACTCAACTTTGAGCTATATTGATTTTGTATTTCTGGGCTCAGCTTTTGACTCAGTCTCATTCCCCAGAAATAATCCCTGTTAACATTTCGGTTTGTGTTATGGAAGTGTTCTCTCTTCTATGAATTACCTAATGCCCATACCATACATATGCCTGCATTTGTACACTCTTAAGCCAAATAACATCGTACTGTGTATTATTCTCTAGTAGCCTGCTTTTTATTGAACTTAATGATAAATGGCAAACATTTGACCATGTCACTTAAGTTTCTTACCGTGATCTCCAACAGCTAGGCAATATTCTGTCATATGGGTTTACCATACTTTTCTCAATCCACAATCTCATCAGAGTCCCAATAGTTGCCTGATATGTCTCCATCAGTTGTGAGGTATGTTTCAAGTGATTTATTACTAGAAATTCTTAGCGAGCTGAAGTTTGTAAATTTTCTCAAGCTACTTTATTGATATATAACACAGATACATAAACTTTGCCCATTCAAAATGTACAATTCAGTGCTTTCAGTATATTCAGAGAGTTTTGCAGCTGTCACCACAGTCAAGTTTAGAATATTTTCATTTTCCCAAAAAGAAACCCTTGACTGGCATCCTTTTCCCCACTTCCTTTTCTCTCCACTCCCAACCTCTCTCCCAGCTCCAGGTAACCACTCATCTACTTTCTGTCTCTATATAGATTTGCCTATTCTAGACTTTTCATATAAATAAATCAGATACTGTGTGGCCCTTTGTGTCTCGATCCTTACACTTAGCATCATGTTTTCAAGGGTCATTCATGTTGTAGCATGTATCAGTACTTCTTTTTTTAGGGCTGAGTAATATTCCATTTACGGATATGCCACATTTCATCTATGCATTCAGTTCACGGACATGTAGGTTGTTTCCACATTTTGGCTATTGTGCATAATGCTTCCAGGTACACTTGTCTACACATTTTTGTGTGGATATAGGTTTACCTTTTTTGGGGTATGCTCCTAAGAGTGCAATTTCTGGATCACGTGGAACTCCTTGTTTAACCTTTTGAGGAGCCACCAGATTGTTCTCCACAGCAGCCACACCCATCTACATTCTAACCAGCAGTGTAGGAAGGTTCCGATTTCTCCATATCTTCACCAGCACTCGCTGTCATTTTTCTTTTTAGTCTTGTCATTTTATTGGGTATG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_21887:HG2_PB_pbsv_16180:HG3_PB_pbsv_15838:HG3_PB_SVrefine2PBcRDovetail_7817:HG3_PB_SVrefine2Falcon1Dovetail_9992:HG3_Ill_MetaSV_1954:HG3_10X_allpass_3102:HG2_PB_SVrefine2PBcRplusDovetail_4048:HG2_PB_SVrefine2PB10Xhap12_11718:HG2_10X_SVrefine210Xhap12_11223:HG3_PB_HySA_24534:HG2_Ill_tnscope_1744:HG2_Ill_MetaSV_1836:HG2_10X_allpass_2523;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11223:HG2_PB_SVrefine2PB10Xhap12_11718:HG2_PB_SVrefine2PBcRplusDovetail_4048:HG3_10X_allpass_3102:HG3_Ill_MetaSV_1954:HG3_PB_SVrefine2Falcon1Dovetail_9992:HG3_PB_SVrefine2PBcRDovetail_7817:HG3_PB_pbsv_15838;NumExactMatchSVs=8;ClusterMaxShiftDist=0.000226236;ClusterMaxSizeDiff=0.000226236;ClusterMaxEditDist=0.000226236;PBcalls=7;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-13260;DistBack=-1;DistForward=-13260;DistMin=-13260;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=16:78371639-78384898;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1377.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:61:52:./.:29:16:27:10:1|0:0:39:42:0:0/1:46:23:0/1:411:186:13223:.:.
chr16	78394515	HG2_CG_vcfBeta_9181	TTTCACAGTACCTCTACTTTCTTGTAATTTTAGCAGTTTACCTAATCATGGTATAATAATCAAAACTAGAAAATAGACAATGGTGCTAAATA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_16181:HG3_PB_pbsv_15839:HG3_PB_HySA_24535:HG3_Ill_svaba_20298:HG3_Ill_scalpel_15532:HG3_Ill_GATKHC_25657:HG3_Ill_GATKHCSBGrefine_10608:HG3_10X_allpass_3103:HG2_PB_assemblyticsfalcon_9983:HG2_PB_SVrefine2Falcon1plusDovetail_4426:HG2_Ill_svaba_20117:HG2_Ill_breakscan11_2315:HG2_Ill_GATKHCSBGrefine_10670:HG2_CG_vcfBeta_9181:HG2_10X_allpass_2524;NumClusterSVs=15;ExactMatchIDs=HG2_10X_allpass_2524:HG2_CG_vcfBeta_9181:HG2_Ill_GATKHCSBGrefine_10670:HG2_Ill_breakscan11_2315:HG2_Ill_svaba_20117:HG2_PB_SVrefine2Falcon1plusDovetail_4426:HG2_PB_assemblyticsfalcon_9983:HG3_10X_allpass_3103:HG3_Ill_GATKHCSBGrefine_10608:HG3_Ill_GATKHC_25657:HG3_Ill_scalpel_15532:HG3_Ill_svaba_20298;NumExactMatchSVs=12;ClusterMaxShiftDist=0.230303;ClusterMaxSizeDiff=0.230303;ClusterMaxEditDist=0.254545;PBcalls=5;Illcalls=7;TenXcalls=2;CGcalls=1;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=1;HG2count=8;HG3count=7;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-91;DistBack=9616;DistForward=59915;DistMin=9616;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=16:78394511-78394608;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1378.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:20:0|1:22:0:1:19:1|0:0:18:30:0:0/1:35:7:./.:.:.:.:.:.
chr16	78757451	HG3_Ill_GATKHCSBGrefine_10609	CTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	C	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_10671:HG2_PB_pbsv_16182:HG2_Ill_Krunchall_21892:HG3_PB_pbsv_15840:HG3_Ill_manta_3604:HG3_Ill_GATKHCSBGrefine_10609:HG2_Ill_Krunchall_21891;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10671:HG3_Ill_manta_3604:HG3_Ill_GATKHCSBGrefine_10609:HG2_Ill_Krunchall_21891;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.0357143;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-55;DistBack=3239;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=41;REFWIDENED=16:78757452-78757547;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1380.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:32:0|1:24:1:0:27:0|1:12:0:0:17:0/1:18:12:./.:.:.:.:.:.
chr16	80390613	HG2_Ill_GATKHCSBGrefine_10675	CTGGCTGAGTCTGCCCACATGCACAGTGAGGACCGGAGAGAACACAACGTGGTACATCCCAACACTGGAATACTAT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_9641:HG4_Ill_Spiral_1267:HG2_Ill_Spiral_1071:HG4_PB_pbsv_16103:HG2_PB_pbsv_16185:HG4_Ill_svaba_20101:HG4_Ill_scalpel_14878:HG4_Ill_manta_3751:HG4_Ill_GATKHCSBGrefine_11036:HG4_Ill_250bpfermikitraw_21231:HG2_Ill_svaba_20136:HG2_Ill_scalpel_15264:HG2_Ill_manta_4420:HG2_Ill_SpiralSDKrefine_6302:HG2_Ill_GATKHCSBGrefine_10675:HG2_Ill_250bpfermikitraw_21571;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21571:HG2_Ill_GATKHCSBGrefine_10675:HG2_Ill_SpiralSDKrefine_6302:HG2_Ill_manta_4420:HG2_Ill_scalpel_15264:HG2_Ill_svaba_20136:HG4_Ill_250bpfermikitraw_21231:HG4_Ill_GATKHCSBGrefine_11036:HG4_Ill_manta_3751:HG4_Ill_scalpel_14878:HG4_Ill_svaba_20101;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0397351;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.0540541;PBcalls=3;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-75;DistBack=1817;DistForward=14137;DistMin=1817;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=76;REFWIDENED=16:80390614-80390764;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:41:1|0:3:25:31:8:1|0:0:19:37:1:0/1:33:12:./.:.:.:.:.:.
chr16	80604430	HG2_PB_SVrefine2PBcRplusDovetail_4052	TCCACCCTCTCACCCTCCCAACTCAACACCACCCCCACCACTCCCACCCTCCCCACTCAACCCCACTCCCACCACTCCCACCCTCCCCGCTCAACCTCACCCCCACCACTCCATCCTCCACACTCAACTCCACCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4430:HG2_PB_pbsv_16187:HG4_PB_pbsv_16106:HG4_Ill_GATKHCSBGrefine_11037:HG2_Ill_GATKHC_25821:HG2_PB_SVrefine2PBcRplusDovetail_4052:HG2_PB_SVrefine2PB10Xhap12_11722;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4430:HG2_PB_SVrefine2PBcRplusDovetail_4052:HG2_PB_SVrefine2PB10Xhap12_11722;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0223048;ClusterMaxSizeDiff=0.0223048;ClusterMaxEditDist=0.0223881;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-134;DistBack=1780;DistForward=-134;DistMin=-134;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=327;REFWIDENED=16:80604431-80604891;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9926;PctRecOverlap=0.9265;SizeDiff=-1;StartDistance=-9;EndDistance=-10;GTMatch=0;TruScore=96;MatchId=1382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:18:0|1:14:0:3:17:./.:11:7:12:1:0/1:7:3:./.:.:.:.:.:.
chr16	81619266	HG4_Ill_250bpfermikitraw_21242	GACACCGCATGGCACAGTACCTTTTGGCCAGTCCACTTCCCTGGACCTTAGAAATTCCTTTGCATCTGCTGGAGGATTGGGCTGGAGAAGAACC	G	20	PASS	ClusterIDs=HG2_PB_pbsv_16196:HG4_Ill_GATKHC_25776:HG4_Ill_GATKHCSBGrefine_11045:HG2_Ill_GATKHC_25832:HG2_Ill_GATKHCSBGrefine_10682:HG2_PB_HySA_29607:HG4_PB_HySA_23666:HG4_PB_SVrefine2PBcRDovetail_8094:HG4_PB_SVrefine2Falcon1Dovetail_9982:HG4_Ill_manta_3753:HG4_Ill_Cortex_1330:HG4_CG_vcfBeta_10226:HG3_PB_SVrefine2Falcon1Dovetail_10003:HG2_PB_assemblyticsfalcon_10008:HG2_PB_SVrefine2Falcon1plusDovetail_4436:HG2_Ill_Cortex_3261:HG2_CG_vcfBeta_9198:HG2_10X_SVrefine210Xhap12_11237:HG2_Ill_breakscan11_2318:HG2_Ill_SpiralSDKrefine_6308:HG4_Ill_Spiral_1269:HG2_Ill_Spiral_1072:HG4_Ill_svaba_20114:HG4_Ill_scalpel_14891:HG4_Ill_Krunchall_22250:HG4_Ill_250bpfermikitraw_21242:HG4_Ill_150bpfermikitraw_20464:HG4_10X_allpass_2948:HG2_Ill_svaba_20150:HG2_Ill_scalpel_15270:HG2_Ill_Krunchall_21915:HG2_Ill_250bpfermikitraw_21581:HG2_Ill_150bpfermikitraw_20348:HG2_10X_allpass_2528:HG4_PB_pbsv_16115;NumClusterSVs=35;ExactMatchIDs=HG2_10X_allpass_2528:HG2_Ill_150bpfermikitraw_20348:HG2_Ill_250bpfermikitraw_21581:HG2_Ill_Krunchall_21915:HG2_Ill_scalpel_15270:HG2_Ill_svaba_20150:HG4_10X_allpass_2948:HG4_Ill_150bpfermikitraw_20464:HG4_Ill_250bpfermikitraw_21242:HG4_Ill_Krunchall_22250:HG4_Ill_scalpel_14891:HG4_Ill_svaba_20114;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0994475;ClusterMaxSizeDiff=0.0994475;ClusterMaxEditDist=0.0994475;PBcalls=9;Illcalls=21;TenXcalls=3;CGcalls=2;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=1;HG4count=16;NumTechs=4;NumTechsExact=2;SVLEN=-93;DistBack=-25;DistForward=-59;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=16:81619267-81619359;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=0.9894;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=1383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:27:1|0:3:21:23:0:1|0:0:14:23:0:0/1:38:24:./.:.:.:.:.:.
chr16	82012062	HG3_Ill_GATKHCSBGrefine_10621	TGAAAACTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCGTGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCTGGCCTGGGCGACAGAGCGAGACTCCGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_allpass_2529:HG2_PB_assemblyticsPBcR_9661:HG2_PB_PB10Xdip_12629:HG2_Ill_SpiralSDKrefine_6311:HG2_PB_SVrefine2PB10Xhap12_11735:HG3_Ill_MetaSV_1963:HG4_PB_SVrefine2Falcon1Dovetail_9986:HG3_PB_SVrefine2Falcon1Dovetail_10007:HG3_Ill_GATKHCSBGrefine_10621:HG2_PB_pbsv_16201:HG2_PB_SVrefine2PBcRplusDovetail_4060:HG2_PB_SVrefine2PB10Xhap12_11734:HG2_PB_SVrefine2Falcon2Bionano_7973:HG2_Ill_MetaSV_1841:HG2_10X_SVrefine210Xhap12_11241:HG3_PB_pbsv_15858;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11241:HG2_Ill_MetaSV_1841:HG2_PB_SVrefine2Falcon2Bionano_7973:HG2_PB_SVrefine2PB10Xhap12_11734:HG2_PB_SVrefine2PBcRplusDovetail_4060:HG2_PB_pbsv_16201:HG3_Ill_GATKHCSBGrefine_10621:HG3_PB_SVrefine2Falcon1Dovetail_10007:HG4_PB_SVrefine2Falcon1Dovetail_9986;NumExactMatchSVs=9;ClusterMaxShiftDist=0.22292;ClusterMaxSizeDiff=0.22292;ClusterMaxEditDist=0.22292;PBcalls=10;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=3650;DistForward=111520;DistMin=3650;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=16:82012063-82012396;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1384.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:39:0|1:32:0:0:36:./.:43:0:0:2:0/1:22:11:0/1:25:13:.:.:.
chr16	82309228	HG2_PB_SVrefine2Falcon1plusDovetail_4440	TTTGGGTGCTGGGAGAAGTGAACCTGTCTGCTTCTGGGATTGACTCTTTTTATGATTGCTGCAGCAGTGGGAAGGGGATGTTGACCAGTGATTTGGGGGTCCATTGGGTGCTGGGAGAAGTGAATCTGTCTGCTTCTGGGATTGACTGTTTTTATGATTGCTGCAGCAGTGGGAAGGGGATGTTGACCAGTGATTTGGGGGTCCATTGGGTGCTGGGAGAAGTGAATCTGTCTGCTTCTGGGATTGACTGTTTTTATGATTGCTGCAGCAGTGGGAAGGGGATGTTGACCAGTGATTTGGGGGTCCATTGGGTGCTGGGAGAAGTGAATCTGTCTGCTTCTGGGATTGACTGTTTTTATGATTGCTGCAGCAGTGGGAAGAGGATGTTGACCAGTGATTTGGGGGTCCATTGGGTGCTGGGAGAAGTGAACCTGTCTGCTTCTGGGATTGACTGTTTTTATGATTGCTGCAGCAGTGGGAAGGGGATGTTGACCAGTGATTTGGGGGTCCA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4440:HG4_PB_pbsv_16125:HG2_PB_pbsv_16205:HG4_PB_SVrefine2PBcRDovetail_8098:HG3_PB_SVrefine2Falcon1Dovetail_10009:HG3_Ill_SVrefine2DISCOVARDovetail_11628;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4440:HG4_PB_SVrefine2PBcRDovetail_8098:HG3_PB_SVrefine2Falcon1Dovetail_10009:HG3_Ill_SVrefine2DISCOVARDovetail_11628;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00196078;ClusterMaxSizeDiff=0.00195886;ClusterMaxEditDist=0.00392157;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-510;DistBack=-409;DistForward=-511;DistMin=-511;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=510;REFWIDENED=16:82309229-82310248;PctSeqSimilarity=0.9908;PctSizeSimilarity=0.998;PctRecOverlap=0.2583;SizeDiff=1;StartDistance=-379;EndDistance=-378;GTMatch=0;TruScore=74;MatchId=1385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:38:0|1:26:4:3:27:./.:2:0:5:0:0/0:12:0:0/1:9:5:.:.:.
chr16	83534089	HG2_PB_pbsv_16213	CCTCCCTCCTCCTCCCCCTCCCCCTCCTCCTCCCTCCTCCTCCCCCTCCTCCTCCCT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_16132:HG4_PB_assemblyticsfalcon_9830:HG3_PB_assemblyticsfalcon_10004:HG2_PB_assemblyticsPBcR_9676:HG4_PB_HySA_23696:HG2_PB_PB10Xdip_12640:HG4_Ill_svaba_20135:HG4_Ill_GATKHC_25801:HG4_10X_allpass_2951:HG3_Ill_svaba_20356:HG3_Ill_GATKHC_25720:HG2_PB_pbsv_16213:HG2_Ill_svaba_20167;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_svaba_20167:HG2_PB_pbsv_16213:HG3_Ill_GATKHC_25720:HG3_Ill_svaba_20356:HG4_10X_allpass_2951:HG4_Ill_GATKHC_25801:HG4_Ill_svaba_20135;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0877193;ClusterMaxSizeDiff=0.0877193;ClusterMaxEditDist=0.0884956;PBcalls=7;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=23;DistForward=7512;DistMin=23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=16:83534088-83534161;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1386.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:0|1:17:5:4:19:./.:0:13:2:1:./.:0:1:./.:.:.:.:.:.
chr16	83757786	HG3_Ill_svaba_20357	AAATGCATGGGTGGGTGATGAATGCATGGGTGGGTGATGAATGCATGGATGAATGTGGAATGCATGGGTGGATGATG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_16136:HG4_Ill_svaba_20137:HG4_Ill_scalpel_14910:HG4_Ill_manta_3756:HG4_Ill_GATKHC_25805:HG4_Ill_GATKHCSBGrefine_11058:HG4_Ill_150bpfermikitraw_20489:HG3_Ill_svaba_20357:HG3_Ill_scalpel_15572:HG3_Ill_GATKHC_25722:HG3_Ill_GATKHCSBGrefine_10637:HG3_Ill_150bpfermikitraw_20433:HG2_PB_pbsv_16216:HG2_Ill_svaba_20169:HG2_Ill_scalpel_15285:HG2_Ill_GATKHC_25856:HG2_Ill_GATKHCSBGrefine_10693:HG2_Ill_150bpfermikitraw_20365:HG3_PB_pbsv_15873;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20365:HG2_Ill_GATKHCSBGrefine_10693:HG2_Ill_GATKHC_25856:HG2_Ill_scalpel_15285:HG2_Ill_svaba_20169:HG2_PB_pbsv_16216:HG3_Ill_150bpfermikitraw_20433:HG3_Ill_GATKHCSBGrefine_10637:HG3_Ill_GATKHC_25722:HG3_Ill_scalpel_15572:HG3_Ill_svaba_20357:HG4_Ill_150bpfermikitraw_20489:HG4_Ill_GATKHCSBGrefine_11058:HG4_Ill_GATKHC_25805:HG4_Ill_manta_3756:HG4_Ill_scalpel_14910:HG4_Ill_svaba_20137;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0131579;ClusterMaxSizeDiff=0.0130719;ClusterMaxEditDist=0.0526316;PBcalls=3;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-76;DistBack=3869;DistForward=4069;DistMin=3869;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=294;REFWIDENED=16:83757544-83757913;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:18:./.:26:11:2:6:./.:47:2:2:33:0/1:17:9:./.:.:.:.:.:.
chr16	83798225	HG3_PB_SVrefine2PBcRDovetail_7834	CCTGCTCAGCCTCCTGAAGTCAGCCCTTTACTCTTGCATCCTGCCTGCCTTCCCTGAGGCCCTTGCCACGG	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_21598:HG3_PB_pbsv_15874:HG2_PB_pbsv_16217:HG3_PB_SVrefine2PBcRDovetail_7834:HG3_Ill_SVrefine2DISCOVARDovetail_11638:HG3_Ill_250bpfermikitraw_20994:HG3_Ill_150bpfermikitraw_20434:HG2_PB_SVrefine2PB10Xhap12_11744:HG2_PB_SVrefine2Falcon2Bionano_7981:HG2_Ill_SVrefine2DISCOVARplusDovetail_4861;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21598:HG3_PB_SVrefine2PBcRDovetail_7834:HG3_Ill_SVrefine2DISCOVARDovetail_11638:HG3_Ill_250bpfermikitraw_20994:HG3_Ill_150bpfermikitraw_20434:HG2_PB_SVrefine2PB10Xhap12_11744:HG2_PB_SVrefine2Falcon2Bionano_7981:HG2_Ill_SVrefine2DISCOVARplusDovetail_4861;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0285714;ClusterMaxSizeDiff=0.0285714;ClusterMaxEditDist=0.0431655;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=8225;DistForward=70290;DistMin=8225;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=132;REFWIDENED=16:83798226-83798427;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:47:1|0:5:33:29:10:./.:6:1:0:2:0/1:16:19:./.:.:.:.:.:.
chr16	84512996	HG3_Ill_SVrefine2DISCOVARDovetail_11641	GCTAATGCCAGCGGAATTCCCTAATGCCAGCGGAATTCCCTAATGCCAGCGGAATTCC	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_21604:HG2_PB_assemblyticsPBcR_9686:HG2_PB_pbsv_16223:HG4_PB_pbsv_16144:HG3_PB_pbsv_15878:HG3_PB_HySA_24599:HG4_PB_assemblyticsfalcon_9840:HG4_Ill_250bpfermikitraw_21272:HG3_PB_SVrefine2PBcRDovetail_7838:HG3_Ill_SVrefine2DISCOVARDovetail_11641:HG3_Ill_250bpfermikitraw_20999;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21604:HG4_PB_assemblyticsfalcon_9840:HG4_Ill_250bpfermikitraw_21272:HG3_PB_SVrefine2PBcRDovetail_7838:HG3_Ill_SVrefine2DISCOVARDovetail_11641:HG3_Ill_250bpfermikitraw_20999;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0350877;PBcalls=7;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-57;DistBack=-39;DistForward=13;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=127;REFWIDENED=16:84512997-84513180;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:55:1/1:2:21:2:16:./.:0:1:0:1:0/1:14:16:./.:.:.:.:.:.
chr16	85184706	HG2_Ill_250bpfermikitraw_21612	GTGTCTCTTTGTGTCTCTCTGTCTCTGTATCTCGTTCTGTCTCTCTGCTCCCCGTTC	G	20	PASS	ClusterIDs=HG3_PB_pbsv_15883:HG3_PB_HySA_24607:HG3_Ill_svaba_20371:HG3_Ill_250bpfermikitraw_21010:HG2_Ill_svaba_20178:HG2_Ill_250bpfermikitraw_21612:HG2_PB_pbsv_16226;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21612:HG2_Ill_svaba_20178:HG3_Ill_250bpfermikitraw_21010:HG3_Ill_svaba_20371;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.119658;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-56;DistBack=-30;DistForward=62;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=175;REFWIDENED=16:85184539-85184769;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1390.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:17:./.:7:13:12:2:./.:68:12:1:14:0/1:14:7:./.:.:.:.:.:.
chr16	85800468	HG2_Ill_Krunchall_21951	TTTTTTTCTTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCCCTCCCTCCCTCCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_16233:HG2_Ill_SpiralSDKrefine_6338:HG2_PB_assemblyticsPBcR_9704:HG4_PB_pbsv_16155:HG4_PB_assemblyticsfalcon_9854:HG4_Ill_GATKHC_25832:HG4_Ill_GATKHCSBGrefine_11065:HG4_10X_allpass_2952:HG2_Ill_GATKHC_25883:HG2_Ill_GATKHCSBGrefine_10700:HG2_10X_allpass_2531:HG4_Ill_svaba_20152:HG4_Ill_scalpel_14923:HG4_Ill_manta_3757:HG4_Ill_Krunchall_22287:HG4_Ill_250bpfermikitraw_21288:HG2_Ill_svaba_20185:HG2_Ill_scalpel_15294:HG2_Ill_manta_4427:HG2_Ill_Krunchall_21951:HG2_Ill_250bpfermikitraw_21623:HG2_Ill_150bpfermikitraw_20384;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20384:HG2_Ill_250bpfermikitraw_21623:HG2_Ill_Krunchall_21951:HG2_Ill_manta_4427:HG2_Ill_scalpel_15294:HG2_Ill_svaba_20185:HG4_Ill_250bpfermikitraw_21288:HG4_Ill_Krunchall_22287:HG4_Ill_manta_3757:HG4_Ill_scalpel_14923:HG4_Ill_svaba_20152;NumExactMatchSVs=11;ClusterMaxShiftDist=0.271186;ClusterMaxSizeDiff=0.271186;ClusterMaxEditDist=0.271186;PBcalls=4;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-52;DistBack=-2;DistForward=28615;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=16:85800467-85800522;PctSeqSimilarity=0.8833;PctSizeSimilarity=0.7879;PctRecOverlap=0.791;SizeDiff=-14;StartDistance=0;EndDistance=-14;GTMatch=0;TruScore=82;MatchId=1392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:48:1/1:0:11:5:34:./.:0:9:0:1:1/1:1:33:./.:.:.:.:.:.
chr16	85941480	HG3_PB_assemblyticsfalcon_10041	GGAAGTGGGTACAGCTGGCATTTAATCCCAGACTGGGTGGCCTTGGGAAAGTTACTTACCTCTTGGAATTGCATTTTCCT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11263:HG2_PB_assemblyticsPBcR_9710:HG4_PB_pbsv_16159:HG2_PB_pbsv_16236:HG3_PB_pbsv_15896:HG3_PB_assemblyticsfalcon_10041:HG3_Ill_GATKHCSBGrefine_10651:HG2_Ill_GATKHCSBGrefine_10703;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11263:HG3_PB_assemblyticsfalcon_10041:HG3_Ill_GATKHCSBGrefine_10651:HG2_Ill_GATKHCSBGrefine_10703;NumExactMatchSVs=4;ClusterMaxShiftDist=0.025641;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.0632911;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-79;DistBack=328;DistForward=-79;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=165;REFWIDENED=16:85941481-85941724;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1393.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:47:0|1:39:3:2:43:./.:6:0:0:4:0/1:20:21:./.:.:.:.:.:.
chr16	86284308	HG2_PB_SVrefine2Falcon1plusDovetail_4465	ACTCCTGAATTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2323:HG3_PB_assemblyticsfalcon_10051:HG2_PB_assemblyticsPBcR_9719:HG4_Ill_Krunchall_22300:HG3_Ill_Krunchall_21577:HG2_PB_assemblyticsfalcon_10068:HG4_Ill_Spiral_1271:HG4_PB_HySA_23729:HG2_PB_HySA_29698:HG4_Ill_MetaSV_1908:HG3_Ill_MetaSV_1974:HG2_Ill_tnscope_1750:HG2_Ill_MetaSV_1848:HG4_PB_pbsv_16168:HG4_PB_assemblyticsfalcon_9865:HG4_PB_SVrefine2PBcRDovetail_8117:HG4_PB_SVrefine2Falcon1Dovetail_10009:HG4_Ill_scalpel_14936:HG4_Ill_manta_3758:HG4_Ill_GATKHCSBGrefine_11071:HG4_10X_allpass_2954:HG3_PB_pbsv_15904:HG3_PB_SVrefine2PBcRDovetail_7851:HG3_PB_SVrefine2Falcon1Dovetail_10037:HG3_Ill_scalpel_15594:HG3_Ill_manta_3618:HG3_Ill_SVrefine2DISCOVARDovetail_11653:HG3_Ill_GATKHCSBGrefine_10655:HG3_10X_allpass_3113:HG2_PB_pbsv_16245:HG2_PB_SVrefine2PBcRplusDovetail_4087:HG2_PB_SVrefine2PB10Xhap12_11771:HG2_PB_SVrefine2Falcon2Bionano_7997:HG2_PB_SVrefine2Falcon1plusDovetail_4465:HG2_Ill_scalpel_15303:HG2_Ill_manta_4429:HG2_Ill_SVrefine2DISCOVARplusDovetail_4877:HG2_Ill_GATKHCSBGrefine_10707:HG2_10X_SVrefine210Xhap12_11265;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11265:HG2_Ill_GATKHCSBGrefine_10707:HG2_Ill_SVrefine2DISCOVARplusDovetail_4877:HG2_Ill_manta_4429:HG2_Ill_scalpel_15303:HG2_PB_SVrefine2Falcon1plusDovetail_4465:HG2_PB_SVrefine2Falcon2Bionano_7997:HG2_PB_SVrefine2PB10Xhap12_11771:HG2_PB_SVrefine2PBcRplusDovetail_4087:HG2_PB_pbsv_16245:HG3_10X_allpass_3113:HG3_Ill_GATKHCSBGrefine_10655:HG3_Ill_SVrefine2DISCOVARDovetail_11653:HG3_Ill_manta_3618:HG3_Ill_scalpel_15594:HG3_PB_SVrefine2Falcon1Dovetail_10037:HG3_PB_SVrefine2PBcRDovetail_7851:HG3_PB_pbsv_15904:HG4_10X_allpass_2954:HG4_Ill_GATKHCSBGrefine_11071:HG4_Ill_manta_3758:HG4_Ill_scalpel_14936:HG4_PB_SVrefine2Falcon1Dovetail_10009:HG4_PB_SVrefine2PBcRDovetail_8117:HG4_PB_assemblyticsfalcon_9865:HG4_PB_pbsv_16168;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0825083;ClusterMaxSizeDiff=0.0825083;ClusterMaxEditDist=0.0825083;PBcalls=17;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=12;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-308;DistBack=41846;DistForward=27714;DistMin=27714;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=16:86284309-86284629;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1394.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:20:0:22:1/1:0:27:0:20:1/1:0:40:./.:2:13:.:.:.
chr16	86452951	HG2_PB_assemblyticsfalcon_10073	GTGGTGGTGGTGGTGATGGTGATGATGGTGGTGATGGTGATGGTGGTGGTGGTGATGGTGATGATGA	G	20	PASS	ClusterIDs=HG4_Ill_svaba_20174:HG4_PB_pbsv_16172:HG3_PB_pbsv_15906:HG2_PB_pbsv_16248:HG4_Ill_GATKHC_25860:HG4_PB_assemblyticsfalcon_9868:HG4_Ill_scalpel_14939:HG4_Ill_GATKHC_25859:HG4_Ill_GATKHCSBGrefine_11072:HG4_Ill_150bpfermikitraw_20523:HG2_PB_assemblyticsfalcon_10073:HG2_PB_assemblyticsPBcR_9722:HG2_Ill_scalpel_15304:HG2_Ill_GATKHC_25901:HG2_Ill_GATKHCSBGrefine_10709;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10709:HG2_Ill_GATKHC_25901:HG2_Ill_scalpel_15304:HG2_PB_assemblyticsPBcR_9722:HG2_PB_assemblyticsfalcon_10073:HG4_Ill_150bpfermikitraw_20523:HG4_Ill_GATKHCSBGrefine_11072:HG4_Ill_GATKHC_25859:HG4_Ill_scalpel_14939:HG4_PB_assemblyticsfalcon_9868;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0461538;ClusterMaxSizeDiff=0.0458015;ClusterMaxEditDist=0.0615385;PBcalls=6;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=-20;DistForward=-1;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=16:86452950-86453089;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1395.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:40:1/1:3:22:3:17:./.:401:385:318:309:0/1:3:14:./.:.:.:.:.:.
chr16	87597656	HG3_Ill_GATKHCSBGrefine_10665	GTGTGTGCGTGTGTTGGGGTGTGTGCGTGTGTGCACATGCGTGTGTGCGCATTTGTGTGTGTTGGGTGTGTGCTTGTGTGCACGTGCATGTATGTGCATT	G	20	PASS	ClusterIDs=HG4_PB_pbsv_16192:HG2_PB_pbsv_16270:HG4_Ill_MetaSV_1911:HG2_PB_HySA_29744:HG2_Ill_MetaSV_1850:HG4_Ill_scalpel_14949:HG4_Ill_GATKHCSBGrefine_11080:HG4_10X_allpass_2956:HG3_PB_pbsv_15920:HG3_Ill_scalpel_15607:HG3_Ill_GATKHC_25783:HG3_Ill_GATKHCSBGrefine_10665:HG3_Ill_250bpfermikitraw_21046:HG2_Ill_scalpel_15317:HG2_Ill_GATKHC_25934:HG2_Ill_GATKHCSBGrefine_10723:HG2_Ill_250bpfermikitraw_21665;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21665:HG2_Ill_GATKHCSBGrefine_10723:HG2_Ill_GATKHC_25934:HG2_Ill_scalpel_15317:HG3_Ill_250bpfermikitraw_21046:HG3_Ill_GATKHCSBGrefine_10665:HG3_Ill_GATKHC_25783:HG3_Ill_scalpel_15607:HG3_PB_pbsv_15920:HG4_10X_allpass_2956:HG4_Ill_GATKHCSBGrefine_11080:HG4_Ill_scalpel_14949;NumExactMatchSVs=12;ClusterMaxShiftDist=0.02;ClusterMaxSizeDiff=0.02;ClusterMaxEditDist=0.020202;PBcalls=4;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-99;DistBack=61431;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=487;REFWIDENED=16:87597392-87597977;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1396.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:49:1/1:4:26:2:15:./.:1:11:2:27:./.:0:1:./.:.:.:.:.:.
chr16	87767162	HG3_Ill_SVrefine2DISCOVARDovetail_11665	GCCACTCCCTGGGATCCTCACTGATGACCTGCCTCGCCTCCTACTTAGGAAT	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_21672:HG3_PB_HySA_24659:HG2_PB_pbsv_16277:HG3_PB_pbsv_15925:HG4_Ill_SVrefine2DISCOVARDovetail_11459:HG3_PB_SVrefine2PBcRDovetail_7861:HG3_PB_SVrefine2Falcon1Dovetail_10055:HG3_Ill_SVrefine2DISCOVARDovetail_11665:HG2_PB_SVrefine2PBcRplusDovetail_4098:HG2_PB_SVrefine2PB10Xhap12_11787:HG2_PB_SVrefine2Falcon2Bionano_8010:HG2_PB_SVrefine2Falcon1plusDovetail_4481;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21672:HG4_Ill_SVrefine2DISCOVARDovetail_11459:HG3_PB_SVrefine2PBcRDovetail_7861:HG3_PB_SVrefine2Falcon1Dovetail_10055:HG3_Ill_SVrefine2DISCOVARDovetail_11665:HG2_PB_SVrefine2PBcRplusDovetail_4098:HG2_PB_SVrefine2PB10Xhap12_11787:HG2_PB_SVrefine2Falcon2Bionano_8010:HG2_PB_SVrefine2Falcon1plusDovetail_4481;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0196078;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0588235;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=422;DistForward=69;DistMin=69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=222;REFWIDENED=16:87767163-87767435;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1397.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:21:0|1:20:2:1:17:./.:0:1:0:1:./.:5:3:./.:.:.:.:.:.
chr16	87981799	HG2_CG_vcfBeta_9243	CAGGCTCAGCGTTCCAGCATTCCACTCGGCCTCCTGGGCTTTTCCTGGGCCACCG	C	20	PASS	ClusterIDs=HG2_Ill_Cortex_3302:HG2_PB_HySA_29766:HG3_PB_HySA_24675:HG4_PB_pbsv_16197:HG4_Ill_svaba_20206:HG4_Ill_manta_3763:HG4_Ill_Krunchall_22333:HG4_Ill_GATKHC_25896:HG4_Ill_GATKHCSBGrefine_11081:HG4_Ill_250bpfermikitraw_21337:HG4_Ill_150bpfermikitraw_20548:HG4_CG_vcfBeta_10265:HG4_10X_allpass_2957:HG3_PB_pbsv_15927:HG3_Ill_svaba_20422:HG3_Ill_scalpel_15611:HG3_Ill_manta_3620:HG3_Ill_Krunchall_21601:HG3_Ill_GATKHC_25792:HG3_Ill_GATKHCSBGrefine_10667:HG3_Ill_250bpfermikitraw_21055:HG3_Ill_150bpfermikitraw_20489:HG3_CG_vcfBeta_8774:HG3_10X_allpass_3115:HG2_PB_pbsv_16281:HG2_Ill_svaba_20242:HG2_Ill_scalpel_15322:HG2_Ill_manta_4433:HG2_Ill_SpiralSDKrefine_6377:HG2_Ill_Krunchall_22004:HG2_Ill_GATKHC_25948:HG2_Ill_GATKHCSBGrefine_10725:HG2_Ill_250bpfermikitraw_21680:HG2_Ill_150bpfermikitraw_20430:HG2_CG_vcfBeta_9243:HG4_Ill_Spiral_1274:HG3_Ill_Spiral_16802:HG2_Ill_Spiral_1074:HG4_PB_assemblyticsfalcon_9900:HG3_PB_assemblyticsfalcon_10091:HG4_Ill_Cortex_1344:HG3_Ill_Cortex_1407;NumClusterSVs=42;ExactMatchIDs=HG2_CG_vcfBeta_9243:HG2_Ill_150bpfermikitraw_20430:HG2_Ill_250bpfermikitraw_21680:HG2_Ill_GATKHCSBGrefine_10725:HG2_Ill_GATKHC_25948:HG2_Ill_Krunchall_22004:HG2_Ill_SpiralSDKrefine_6377:HG2_Ill_manta_4433:HG2_Ill_scalpel_15322:HG2_Ill_svaba_20242:HG2_PB_pbsv_16281:HG3_10X_allpass_3115:HG3_CG_vcfBeta_8774:HG3_Ill_150bpfermikitraw_20489:HG3_Ill_250bpfermikitraw_21055:HG3_Ill_GATKHCSBGrefine_10667:HG3_Ill_GATKHC_25792:HG3_Ill_Krunchall_21601:HG3_Ill_manta_3620:HG3_Ill_scalpel_15611:HG3_Ill_svaba_20422:HG3_PB_pbsv_15927:HG4_10X_allpass_2957:HG4_CG_vcfBeta_10265:HG4_Ill_150bpfermikitraw_20548:HG4_Ill_250bpfermikitraw_21337:HG4_Ill_GATKHCSBGrefine_11081:HG4_Ill_GATKHC_25896:HG4_Ill_Krunchall_22333:HG4_Ill_manta_3763:HG4_Ill_svaba_20206:HG4_PB_pbsv_16197;NumExactMatchSVs=32;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.036036;PBcalls=7;Illcalls=30;TenXcalls=2;CGcalls=3;PBexactcalls=3;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=3;HG2count=14;HG3count=15;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-54;DistBack=-38;DistForward=27609;DistMin=-38;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=16:87981800-87981855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1398.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:34:0|1:30:5:1:27:0|1:18:1:0:23:0/1:35:30:./.:.:.:.:.:.
chr16	88328548	HG4_PB_SVrefine2Falcon1Dovetail_10035	AGCCCTCAGGACGTGGCAGGGCTCAGGGTCTGGGGAGGATGTCATCTCTAGCCCCCAGGACGTGGCAGGGCTCAGGGTCTGGGGAGTATGTCATCTCGGGCCCCCAGGATGTGGCAGGGCTCAGGGTCTGGGGAGGACGTCATCTCAG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8020:HG4_PB_SVrefine2PBcRDovetail_8131:HG3_PB_HySA_24703:HG4_PB_HySA_23822:HG2_PB_HySA_29807:HG2_PB_pbsv_16297:HG2_PB_assemblyticsfalcon_10125:HG2_PB_SVrefine2Falcon1plusDovetail_4489:HG3_PB_pbsv_15947:HG4_PB_pbsv_16211:HG4_PB_SVrefine2Falcon1Dovetail_10035:HG3_PB_SVrefine2PBcRDovetail_7869:HG3_PB_SVrefine2Falcon1Dovetail_10063:HG2_PB_SVrefine2PBcRplusDovetail_4109:HG2_PB_SVrefine2PB10Xhap12_11800;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8020:HG4_PB_SVrefine2Falcon1Dovetail_10035:HG3_PB_SVrefine2PBcRDovetail_7869:HG3_PB_SVrefine2Falcon1Dovetail_10063:HG2_PB_SVrefine2PBcRplusDovetail_4109:HG2_PB_SVrefine2PB10Xhap12_11800;NumExactMatchSVs=6;ClusterMaxShiftDist=0.020202;ClusterMaxSizeDiff=0.020202;ClusterMaxEditDist=0.0673401;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-147;DistBack=-240;DistForward=-1;DistMin=-240;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=435;REFWIDENED=16:88328549-88329130;PctSeqSimilarity=0.9663;PctSizeSimilarity=1;PctRecOverlap=0.4054;SizeDiff=0;StartDistance=-88;EndDistance=-88;GTMatch=0;TruScore=79;MatchId=1399.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:13:47:1/1:4:15:5:25:./.:6:0:2:0:0/0:22:2:./.:.:.:.:.:.
chr16	88600654	HG4_Ill_GATKHC_25929	CCCCCGCGCCCGAGTCGCCGCGGCCCGGAAGCGGAAGCGGAAGCGGCCCCGGCCTCGCCCCTGCGCGCTCGCCCGG	C	20	PASS	ClusterIDs=HG2_PB_HySA_29824:HG2_PB_assemblyticsfalcon_10143:HG4_PB_pbsv_16222:HG4_PB_HySA_23829:HG2_PB_assemblyticsPBcR_9784:HG4_PB_assemblyticsfalcon_9931:HG3_PB_assemblyticsfalcon_10118:HG2_PB_pbsv_16308:HG4_Ill_svaba_20239:HG4_Ill_scalpel_14965:HG4_Ill_manta_3766:HG4_Ill_Krunchall_22356:HG4_Ill_GATKHC_25929:HG4_Ill_GATKHCSBGrefine_11095:HG4_Ill_Cortex_1347:HG4_Ill_250bpfermikitraw_21359:HG4_Ill_150bpfermikitraw_20571:HG2_Ill_svaba_20276:HG2_Ill_scalpel_15335:HG2_Ill_SpiralSDKrefine_6410:HG2_Ill_Krunchall_22031:HG2_Ill_GATKHC_25984:HG2_Ill_GATKHCSBGrefine_10741:HG2_Ill_Cortex_3307:HG2_Ill_250bpfermikitraw_21708:HG2_Ill_150bpfermikitraw_20456;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20456:HG2_Ill_250bpfermikitraw_21708:HG2_Ill_Cortex_3307:HG2_Ill_GATKHCSBGrefine_10741:HG2_Ill_GATKHC_25984:HG2_Ill_Krunchall_22031:HG2_Ill_SpiralSDKrefine_6410:HG2_Ill_scalpel_15335:HG2_Ill_svaba_20276:HG4_Ill_150bpfermikitraw_20571:HG4_Ill_250bpfermikitraw_21359:HG4_Ill_Cortex_1347:HG4_Ill_GATKHCSBGrefine_11095:HG4_Ill_GATKHC_25929:HG4_Ill_Krunchall_22356:HG4_Ill_manta_3766:HG4_Ill_scalpel_14965:HG4_Ill_svaba_20239;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0263158;ClusterMaxSizeDiff=0.0263158;ClusterMaxEditDist=0.0266667;PBcalls=8;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=1;HG4count=12;NumTechs=2;NumTechsExact=1;SVLEN=-75;DistBack=3504;DistForward=12528;DistMin=3504;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=16:88600655-88600741;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1400.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:37:./.:15:12:8:20:./.:1:0:0:1:0/1:33:19:./.:.:.:.:.:.
chr16	89022080	HG2_PB_pbsv_16328	ACCCAAGGCTCCTGACCCCACCCAAGGCTCCTGACCCCACCCAAGGCTCCTGACCTC	A	10	PASS	ClusterIDs=HG4_PB_pbsv_16247:HG2_PB_pbsv_16328:HG3_PB_HySA_24736:HG3_PB_pbsv_15966;NumClusterSVs=4;ExactMatchIDs=HG2_PB_pbsv_16328;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.105263;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-56;DistBack=10;DistForward=5538;DistMin=10;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=16:89022079-89022137;PctSeqSimilarity=0.9889;PctSizeSimilarity=1;PctRecOverlap=0.3158;SizeDiff=0;StartDistance=39;EndDistance=39;GTMatch=0;TruScore=76;MatchId=1401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:7:37:1/1:3:19:2:8:./.:1:0:0:0:./.:2:0:./.:.:.:.:.:.
chr16	89149727	HG2_PB_SVrefine2Falcon2Bionano_8040	AGTACTGTAACAGCCTCTTTCCCCGGGGGAGGGGTACCGCAACAGCCTCTTCCCTCCCGGGGGAGGGGTACCGCAACAGCCTCTTCTCCCCCGGGGGAGGGGTACCGCAACAGCCTCTTCTCCCCCGGGGAGGGGTACCGCAACAGCCTCTTTCCCCAGGGGAGGGGTACCGCAACAGCCTCTTCTCCCCCGGGGGAGGGGTACCGCAACAGCCTCTTCTCCCCCGGGGAGGGGTACCGCAACAGCCTCTTTCCCCAGGGGAGGGGTACCGCAACAGCCTCTTCCCCCGGGGGAGGGGTACCGCAACAGCCTCTTCCCCCCGGGGGAGGGGTACCGCAACAGCCTCTTCCCCCCGGGGGAGGG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4131:HG4_PB_pbsv_16256:HG2_PB_pbsv_16339:HG3_PB_pbsv_15977:HG4_PB_SVrefine2PBcRDovetail_8142:HG4_PB_SVrefine2Falcon1Dovetail_10071:HG2_PB_SVrefine2Falcon2Bionano_8040:HG2_PB_SVrefine2Falcon1plusDovetail_4515;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4515:HG2_PB_SVrefine2Falcon2Bionano_8040:HG4_PB_SVrefine2Falcon1Dovetail_10071;NumExactMatchSVs=3;ClusterMaxShiftDist=0.258575;ClusterMaxSizeDiff=0.258575;ClusterMaxEditDist=0.258575;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-362;DistBack=8259;DistForward=-343;DistMin=-343;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=785;REFWIDENED=16:89149728-89150842;PctSeqSimilarity=0.9701;PctSizeSimilarity=1;PctRecOverlap=0.4959;SizeDiff=0;StartDistance=-183;EndDistance=-183;GTMatch=0;TruScore=82;MatchId=1402.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:33:1|0:1:20:17:3:./.:4:1:5:0:0/0:31:1:0/0:22:1:.:.:.
chr16	89680311	HG3_Ill_GATKHC_25882	GGCTTCCTGGGATTCTAGGAGGCTGGGACCAGGTGTGTGGGGCAGGGGACGAGGCA	G	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_10195:HG3_PB_assemblyticsfalcon_10196:HG2_PB_pbsv_16370:HG4_PB_pbsv_16286:HG4_Ill_svaba_20290:HG4_Ill_GATKHC_25992:HG4_Ill_GATKHCSBGrefine_11114:HG4_Ill_250bpfermikitraw_21399:HG3_PB_pbsv_16016:HG3_Ill_svaba_20503:HG3_Ill_scalpel_15654:HG3_Ill_GATKHC_25882:HG3_Ill_GATKHCSBGrefine_10715:HG3_Ill_250bpfermikitraw_21120:HG2_PB_assemblyticsPBcR_9839:HG2_Ill_svaba_20322:HG2_Ill_GATKHC_26030:HG2_Ill_GATKHCSBGrefine_10768:HG2_Ill_250bpfermikitraw_21740;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21740:HG2_Ill_GATKHCSBGrefine_10768:HG2_Ill_GATKHC_26030:HG2_Ill_svaba_20322:HG2_PB_assemblyticsPBcR_9839:HG3_Ill_250bpfermikitraw_21120:HG3_Ill_GATKHCSBGrefine_10715:HG3_Ill_GATKHC_25882:HG3_Ill_scalpel_15654:HG3_Ill_svaba_20503:HG3_PB_pbsv_16016:HG4_Ill_250bpfermikitraw_21399:HG4_Ill_GATKHCSBGrefine_11114:HG4_Ill_GATKHC_25992:HG4_Ill_svaba_20290;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.218182;PBcalls=6;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=8;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=38;DistForward=3606;DistMin=38;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=278;REFWIDENED=16:89680218-89680550;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1406.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:0|1:18:3:5:16:./.:11:0:0:4:0/1:9:10:./.:.:.:.:6527:.
chr16	89811717	HG2_PB_SVrefine2Falcon1plusDovetail_4537	TAACGCAACAGTGAAGGGACCACACTCCCCTGAGCTGGGAACGAAACAGTGAAGGGACCACAGTCCCCTGAGCTGGGAATGAAACAGTGAAGGGACCACACTCCTCTGAGCTGGGAACAAAACAGTGAAGGGACCACACTCCTCTGAGCTGGGAACAAAACAGTGAAGGGACCACACTCCTCTGAGCTGGG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4537:HG3_PB_assemblyticsfalcon_10205:HG3_PB_SVrefine2Falcon1Dovetail_10125:HG2_Ill_GATKHCSBGrefine_10771:HG4_PB_pbsv_16296:HG2_PB_pbsv_16378:HG4_Ill_SVrefine2DISCOVARDovetail_11497:HG2_Ill_SVrefine2DISCOVARplusDovetail_4926:HG2_10X_SVrefine210Xhap12_11344:HG2_PB_SVrefine2PBcRplusDovetail_4152:HG2_PB_SVrefine2PB10Xhap12_11852;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4537:HG4_Ill_SVrefine2DISCOVARDovetail_11497:HG2_PB_SVrefine2PBcRplusDovetail_4152:HG2_PB_SVrefine2PB10Xhap12_11852;NumExactMatchSVs=4;ClusterMaxShiftDist=0.33698;ClusterMaxSizeDiff=0.33698;ClusterMaxEditDist=0.347826;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-190;DistBack=12283;DistForward=-186;DistMin=-186;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=319;REFWIDENED=16:89811718-89812226;PctSeqSimilarity=0.9696;PctSizeSimilarity=1;PctRecOverlap=0.0576;SizeDiff=0;StartDistance=-180;EndDistance=-180;GTMatch=0;TruScore=67;MatchId=1407.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:19:0|1:35:1:1:19:0/0:22:0:14:0:0/0:39:0:./.:.:.:.:.:.
chr16	90048832	HG2_Ill_manta_4440	CACCAGCAAGCCTCCGCCTGTCCTTCACTGGGCCTGGTCTGTCGGGTTGCTGAAGGCCGGTGAAGCACTGCTCAGGGTTTAGTA	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_20490:HG2_PB_assemblyticsPBcR_9859:HG2_PB_assemblyticsfalcon_10215:HG3_PB_pbsv_16030:HG4_PB_pbsv_16302:HG2_PB_pbsv_16384:HG2_PB_HySA_29944:HG4_PB_assemblyticsfalcon_10017:HG4_Ill_svaba_20300:HG4_Ill_manta_3775:HG4_Ill_Krunchall_22397:HG4_Ill_GATKHCSBGrefine_11122:HG4_Ill_250bpfermikitraw_21407:HG3_Ill_svaba_20511:HG3_Ill_Krunchall_21653:HG3_Ill_GATKHCSBGrefine_10722:HG3_Ill_250bpfermikitraw_21127:HG2_Ill_svaba_20331:HG2_Ill_scalpel_15358:HG2_Ill_manta_4440:HG2_Ill_SpiralSDKrefine_6445:HG2_Ill_GATKHCSBGrefine_10773:HG2_Ill_250bpfermikitraw_21748;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20490:HG4_Ill_svaba_20300:HG4_Ill_manta_3775:HG4_Ill_Krunchall_22397:HG4_Ill_GATKHCSBGrefine_11122:HG4_Ill_250bpfermikitraw_21407:HG3_Ill_svaba_20511:HG3_Ill_Krunchall_21653:HG3_Ill_GATKHCSBGrefine_10722:HG3_Ill_250bpfermikitraw_21127:HG2_Ill_svaba_20331:HG2_Ill_scalpel_15358:HG2_Ill_manta_4440:HG2_Ill_SpiralSDKrefine_6445:HG2_Ill_GATKHCSBGrefine_10773:HG2_Ill_250bpfermikitraw_21748;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0238095;ClusterMaxSizeDiff=0.0238095;ClusterMaxEditDist=0.0359281;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-83;DistBack=-1;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=83;REFWIDENED=16:90048833-90048998;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1408.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:47:1/1:5:28:1:11:1/1:0:5:0:7:1/1:0:31:./.:.:.:.:.:.
chr17	20542	HG2_PB_SVrefine2PBcRplusDovetail_4161	CAGCACCAGGGACCAGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCGGCACCAGGGGCCGGGCCAGGTTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11351:HG4_PB_assemblyticsfalcon_10027:HG4_PB_SVrefine2Falcon1Dovetail_10110:HG3_PB_SVrefine2Falcon1Dovetail_10137:HG4_10X_allpass_2966:HG2_10X_allpass_2537:HG3_10X_allpass_3123:HG3_PB_pbsv_16035:HG2_PB_pbsv_16391:HG4_PB_pbsv_16313:HG4_Ill_MetaSV_1926:HG4_PB_SVrefine2PBcRDovetail_8167:HG3_PB_SVrefine2PBcRDovetail_7902:HG3_PB_SVrefine2Falcon1Dovetail_10136:HG3_Ill_SVrefine2DISCOVARDovetail_11708:HG2_PB_SVrefine2PBcRplusDovetail_4161:HG2_PB_SVrefine2PB10Xhap12_11863:HG2_PB_SVrefine2Falcon2Bionano_8063:HG2_PB_SVrefine2Falcon1plusDovetail_4545:HG2_Ill_SVrefine2DISCOVARplusDovetail_4933;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4933:HG2_PB_SVrefine2Falcon1plusDovetail_4545:HG2_PB_SVrefine2Falcon2Bionano_8063:HG2_PB_SVrefine2PB10Xhap12_11863:HG2_PB_SVrefine2PBcRplusDovetail_4161:HG3_Ill_SVrefine2DISCOVARDovetail_11708:HG3_PB_SVrefine2Falcon1Dovetail_10136:HG3_PB_SVrefine2PBcRDovetail_7902:HG4_PB_SVrefine2PBcRDovetail_8167;NumExactMatchSVs=9;ClusterMaxShiftDist=0.203852;ClusterMaxSizeDiff=0.203852;ClusterMaxEditDist=0.203852;PBcalls=13;Illcalls=3;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-1010;DistBack=2074;DistForward=-1003;DistMin=-1003;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=266;REFWIDENED=17:20535-21810;PctSeqSimilarity=0.9794;PctSizeSimilarity=0.998;PctRecOverlap=0.9042;SizeDiff=-2;StartDistance=-95;EndDistance=-97;GTMatch=0;TruScore=96;MatchId=1410.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:48:./.:3:8:0:22:./.:2:8:3:5:0/1:11:8:0/1:6:27:.:.:.
chr17	114095	HG2_Ill_GATKHC_26065	CGCAGCACGTTGACAGCAGGATTACCCTTCGGAGCCGTGCGCGCTGGATGGGGACTCAGAATCCGCAGCACGTTGACAGCAGGATTACCCTTCGGAGCCGTGCGCGCTGGATGGGGACTCAGAATCT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_16045:HG4_PB_SVrefine2Falcon1Dovetail_10125:HG2_PB_SVrefine2PB10Xhap12_11877:HG2_PB_assemblyticsfalcon_10240:HG3_PB_SVrefine2Falcon1Dovetail_10147:HG3_Ill_SVrefine2DISCOVARDovetail_11709:HG3_Ill_GATKHC_25904:HG3_Ill_250bpfermikitraw_21132:HG3_Ill_150bpfermikitraw_20554:HG2_PB_SVrefine2PBcRplusDovetail_4174:HG2_PB_SVrefine2PB10Xhap12_11876:HG2_PB_SVrefine2Falcon1plusDovetail_4554:HG2_Ill_SpiralSDKrefine_6455:HG2_Ill_SVrefine2DISCOVARplusDovetail_4935:HG2_Ill_GATKHC_26065:HG2_10X_SVrefine210Xhap12_11355:HG2_PB_pbsv_16404:HG3_PB_SVrefine2PBcRDovetail_7907;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11355:HG2_Ill_GATKHC_26065:HG2_Ill_SVrefine2DISCOVARplusDovetail_4935:HG2_Ill_SpiralSDKrefine_6455:HG2_PB_SVrefine2Falcon1plusDovetail_4554:HG2_PB_SVrefine2PB10Xhap12_11876:HG2_PB_SVrefine2PBcRplusDovetail_4174:HG3_Ill_150bpfermikitraw_20554:HG3_Ill_250bpfermikitraw_21132:HG3_Ill_GATKHC_25904:HG3_Ill_SVrefine2DISCOVARDovetail_11709:HG3_PB_SVrefine2Falcon1Dovetail_10147;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0398406;ClusterMaxSizeDiff=0.0398406;ClusterMaxEditDist=0.0722892;PBcalls=10;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-126;DistBack=-136;DistForward=1423;DistMin=-136;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=183;REFWIDENED=17:114042-114350;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:35:0|1:14:2:2:32:1|0:0:9:11:1:0/1:19:11:./.:.:.:.:.:.
chr17	144372	HG2_PB_SVrefine2Falcon2Bionano_8074	TGGATGGACAGAGGGAATGCACATCAGTGTGGGAGGGACACAGATGCTGCAGAAATGGACAGCAGAGGGAATGCACACAGTGTGGGAGGGACAGAGATGCTGCAGAAATGGACGGGCAGAGGGAATGCACATCAGTGTGGGAAGGACAGAAGAGCTGCAGAAATGGACGGGCAGAGGGAATGCACATCAGTGTG	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4557:HG4_PB_assemblyticsfalcon_10044:HG4_PB_SVrefine2Falcon1Dovetail_10128:HG3_PB_SVrefine2PBcRDovetail_7910:HG2_PB_SVrefine2PBcRplusDovetail_4178:HG2_PB_SVrefine2PB10Xhap12_11880:HG2_PB_SVrefine2Falcon2Bionano_8074:HG2_PB_SVrefine2Falcon1plusDovetail_4558:HG3_PB_SVrefine2Falcon1Dovetail_10150;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4558:HG2_PB_SVrefine2Falcon2Bionano_8074:HG2_PB_SVrefine2PB10Xhap12_11880:HG2_PB_SVrefine2PBcRplusDovetail_4178:HG3_PB_SVrefine2PBcRDovetail_7910;NumExactMatchSVs=5;ClusterMaxShiftDist=0.248307;ClusterMaxSizeDiff=0.248307;ClusterMaxEditDist=0.248307;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-193;DistBack=-813;DistForward=-170;DistMin=-813;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=203;REFWIDENED=17:144373-144768;PctSeqSimilarity=0.8462;PctSizeSimilarity=0.8813;PctRecOverlap=0.4727;SizeDiff=-26;StartDistance=-90;EndDistance=-116;GTMatch=0;TruScore=73;MatchId=1413.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:34:1/1:2:10:0:18:./.:3:4:2:2:./.:2:3:./.:.:.:.:.:.
chr17	182928	HG2_Ill_GATKHCSBGrefine_10780	CGGCCATTAGAGCTCACCACCCCGGGCGTTCGTCACTGCAGACATCACTGCAGACACAGAGAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11358:HG4_PB_pbsv_16337:HG4_PB_assemblyticsfalcon_10053:HG2_PB_pbsv_16416:HG2_PB_assemblyticsfalcon_10246:HG4_Ill_Krunchall_22407:HG4_Ill_250bpfermikitraw_21419:HG3_Ill_Krunchall_21660:HG3_Ill_GATKHCSBGrefine_10730:HG3_Ill_250bpfermikitraw_21134:HG2_Ill_GATKHC_26076:HG2_Ill_GATKHCSBGrefine_10780:HG2_Ill_250bpfermikitraw_21758:HG2_Ill_150bpfermikitraw_20503:HG3_PB_pbsv_16059:HG4_Ill_SVrefine2DISCOVARDovetail_11508:HG2_PB_SVrefine2PBcRplusDovetail_4183:HG2_PB_SVrefine2PB10Xhap12_11888:HG2_Ill_SVrefine2DISCOVARplusDovetail_4938;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20503:HG2_Ill_250bpfermikitraw_21758:HG2_Ill_GATKHCSBGrefine_10780:HG2_Ill_GATKHC_26076:HG3_Ill_250bpfermikitraw_21134:HG3_Ill_GATKHCSBGrefine_10730:HG3_Ill_Krunchall_21660:HG4_Ill_250bpfermikitraw_21419:HG4_Ill_Krunchall_22407;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0983607;ClusterMaxSizeDiff=0.0983607;ClusterMaxEditDist=0.134454;PBcalls=7;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-62;DistBack=1848;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=125;REFWIDENED=17:182874-183060;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1414.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:39:1/1:2:14:2:12:./.:0:3:0:4:1/1:0:40:./.:.:.:.:.:.
chr17	184368	HG2_PB_SVrefine2Falcon1plusDovetail_4565	ATCCACTGTGGAGGGACAGGGACAAGGACAGGGACAAGGCAACCACCCCACCCAGTGCAGCTCCTTCTCCCCACGCCTTCCCCCAGGGCCAGCCCGTCCACTGTGGAGGGACAGGGACAAGGACAGGGACAAGGCAACCACCCCCAGCAAGTGCGGCTCCTTCTCCCCACGCCTTCCCCCAGGGCCAGCCCA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_16339:HG4_PB_assemblyticsfalcon_10055:HG4_Ill_MetaSV_1932:HG4_PB_SVrefine2Falcon1Dovetail_10133:HG4_PB_SVrefine2PBcRDovetail_8178:HG3_Ill_SVrefine2DISCOVARDovetail_11714:HG2_PB_SVrefine2PBcRplusDovetail_4184:HG2_PB_SVrefine2PB10Xhap12_11889:HG2_PB_SVrefine2Falcon1plusDovetail_4565:HG2_Ill_SVrefine2DISCOVARplusDovetail_4939:HG2_10X_SVrefine210Xhap12_11359:HG2_Ill_250bpfermikitraw_21759:HG2_Ill_150bpfermikitraw_20504:HG3_PB_pbsv_16060:HG2_PB_pbsv_16417;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11359:HG2_Ill_SVrefine2DISCOVARplusDovetail_4939:HG2_PB_SVrefine2Falcon1plusDovetail_4565:HG2_PB_SVrefine2PB10Xhap12_11889:HG2_PB_SVrefine2PBcRplusDovetail_4184:HG3_Ill_SVrefine2DISCOVARDovetail_11714:HG4_PB_SVrefine2PBcRDovetail_8178;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0369393;ClusterMaxSizeDiff=0.0369393;ClusterMaxEditDist=0.106383;PBcalls=9;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-191;DistBack=-12690;DistForward=-168;DistMin=-12690;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=320;REFWIDENED=17:184203-184713;PctSeqSimilarity=0.9943;PctSizeSimilarity=1;PctRecOverlap=0.8073;SizeDiff=0;StartDistance=37;EndDistance=37;GTMatch=0;TruScore=93;MatchId=1415.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:3:10:1:14:./.:0:4:1:2:1/1:0:18:./.:.:.:.:.:.
chr17	185812	HG2_Ill_manta_4442	CAGGGCGACAGGGAGGAGATGGGGTTTAGAGGAGGGAAAAGAAGCTGGGACAAACATAAAAGA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_16062:HG4_PB_assemblyticsfalcon_10056:HG4_Ill_svaba_20315:HG4_Ill_scalpel_15005:HG4_Ill_manta_3777:HG4_Ill_Krunchall_22408:HG4_Ill_GATKHC_26025:HG4_Ill_Cortex_1359:HG4_Ill_250bpfermikitraw_21420:HG4_Ill_150bpfermikitraw_20626:HG4_CG_vcfBeta_10301:HG4_10X_allpass_2967:HG3_Ill_svaba_20526:HG3_Ill_Krunchall_21661:HG3_Ill_GATKHC_25911:HG3_Ill_GATKHCSBGrefine_10731:HG3_Ill_Cortex_1417:HG3_Ill_250bpfermikitraw_21135:HG3_Ill_150bpfermikitraw_20556:HG3_CG_vcfBeta_8807:HG3_10X_allpass_3124:HG2_PB_pbsv_16418:HG2_Ill_svaba_20347:HG2_Ill_scalpel_15369:HG2_Ill_manta_4442:HG2_Ill_breakscan11_2354:HG2_Ill_Krunchall_22069:HG2_Ill_GATKHC_26077:HG2_Ill_GATKHCSBGrefine_10782:HG2_Ill_Cortex_3318:HG2_Ill_250bpfermikitraw_21760:HG2_Ill_150bpfermikitraw_20505:HG2_CG_vcfBeta_9281:HG2_10X_allpass_2540:HG3_Ill_Spiral_16857:HG2_Ill_Spiral_1076:HG4_PB_pbsv_16341;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_2540:HG2_CG_vcfBeta_9281:HG2_Ill_150bpfermikitraw_20505:HG2_Ill_250bpfermikitraw_21760:HG2_Ill_Cortex_3318:HG2_Ill_GATKHCSBGrefine_10782:HG2_Ill_GATKHC_26077:HG2_Ill_Krunchall_22069:HG2_Ill_breakscan11_2354:HG2_Ill_manta_4442:HG2_Ill_scalpel_15369:HG2_Ill_svaba_20347:HG2_PB_pbsv_16418:HG3_10X_allpass_3124:HG3_CG_vcfBeta_8807:HG3_Ill_150bpfermikitraw_20556:HG3_Ill_250bpfermikitraw_21135:HG3_Ill_Cortex_1417:HG3_Ill_GATKHCSBGrefine_10731:HG3_Ill_GATKHC_25911:HG3_Ill_Krunchall_21661:HG3_Ill_svaba_20526:HG4_10X_allpass_2967:HG4_CG_vcfBeta_10301:HG4_Ill_150bpfermikitraw_20626:HG4_Ill_250bpfermikitraw_21420:HG4_Ill_Cortex_1359:HG4_Ill_GATKHC_26025:HG4_Ill_Krunchall_22408:HG4_Ill_manta_3777:HG4_Ill_scalpel_15005:HG4_Ill_svaba_20315:HG4_PB_assemblyticsfalcon_10056;NumExactMatchSVs=33;ClusterMaxShiftDist=0.015873;ClusterMaxSizeDiff=0.015748;ClusterMaxEditDist=0.0634921;PBcalls=4;Illcalls=27;TenXcalls=3;CGcalls=3;PBexactcalls=2;Illexactcalls=25;TenXexactcalls=3;CGexactcalls=3;HG2count=14;HG3count=11;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-62;DistBack=1327;DistForward=4254;DistMin=1327;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=17:185811-185876;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:40:1/1:2:9:2:12:1/1:0:7:0:14:1/1:0:45:./.:.:.:.:.:.
chr17	193768	HG2_Ill_SVrefine2DISCOVARplusDovetail_4940	TTACCATCACCATCACTGTCATCTCTGTCATCACCACCATCATCACTATCATCACCCCCATCATCACCATCATCATCGTCACCACTGTCATCATCGTCATCACTATCACCATCATTGTCACCATCATATTCACCTCCAGTCATCATCACCATCAGACATTGTCATCATCACCATCATCATTTTTACCATCATGATCACCAACACCACTATAATCACCCTCATCATCATCACCATCATCACTATCATCACCATCACTGTTACATCATCATCATATTCACCTCCATCAGTCACCATCACCACCATCACTGTCATCTCGGTTACCACCACCATCACTATAATCATCACCATCACCATCACCGTCATCATTATTACCATCATCATCACCAACACCACTATCATAACCATCACCACCATCAGACATCATCACCATCATCACCCACATCATCATCACCATCACCACCATCAGACATCATCACCACTATCATGACCATCACCCACATCATCATCACCATCACTGTCATCTGTGTCACCACCACCATCATCACTATCATCATCACCATCATCATGATCACCATCATCATCACCAACACCACTATCATCGCCCTCATCATCACCATCATTGTCAATCAGCATCACCATCATCACTATCATCACAATCACTGTTACATCATCACCATGTTCACCTCCATCAGTCATCATCACCACCATCACTGTCATCTCAGTTACCACCATCACTATAATCATCACCATCATTGTCAATCACCATCACCATCATCACTATCATCACAATCACTGTTACATCATCATATTCACCTCCATCAGACATTGTCACCATCAGTCATCACTATTCTCATCATCATCCTCTTCTGTATTGGGGGAAATGCCCAGAGGGGCTCATATCTGGGCAGGAGACCTGATGAATAGAAAGTGTATATACTGGGAAGAGGAATCAGCATGAGGGGAAAGGCCACCTGGCCTTGCTGAGAGAGGCAGGAGGCCCGTTGGTGAGGCCAAATCAAAAACCATCCTGGCCTGTAATCCCAGCATTTTGGGAGGCCAAGGCGGGAGGATCGATTGAGCCCAGGAGTTTGAATCCAGCCTGGGCAACATGGTGAAACCTTGTCTCTGAAAACACACACACACACAGAAAAAATTAGCTGGGCTCAGTGACACACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGTAGGAGGGTCACCTGAGCCTGGGGAGGTTAAGCCTGCAGTGAGCCATGATCGTGCCACTGCACTCCAGGCTGGGCTACAGAGTGAGACCCTGTCTCAAAGGCAAACAAACAAACAGAACACCCTAAATCCCATCTGCAAAGGTGGCAGTAGCTGGCAAGTCTACAGCCACTGCTGTGAGGACTCCATCTGCCTGGTCACTTTCCCACCTCTCTAACTTCTCATTGCCATTAGCAGGAACTTCCTCAAACAAAACCACCGGGGGGTTCATCCTCAGAGAAGCTGGAAGGGGGAATCCCTGGGGTTTCTACGCCTGTATAGCCAGGCTTGGAGAAACAGAAACAGCCACCCAGGACTGGCTAGAGAACTGAGTCCTGGGGCAAGTGAGAGGAGGCTAGGAGCAGTGCCCTGAGGCTGAGAAGTGGGTGCCTGCTGGGGCACGCGTGCTCCCCATCTGCACGCACACCCTGCTGGGGCACGCGTGCTCCCCATCTGCGCGCACACCCTGCTGGGGCACGCGTGCTCCCCATCTGCGTGCATACCCTACTGGGGCACGCGTGCTCCCCATCTGCGTGCACACCCTGCTGGGGCACGCGTGCTCCCCATCTGCATGCACACCCTGCTGAGGCAAGCGTGCTCCCCAACTGCCCCATCTGCCCGCACACCCTGCTGGGGCATGCCTGCTCCCCACCTGCACACACACCCCGACTTTGCACTGTAAGGACAAATGGGATGCCAGTGGGCTCTGAGTCTCGAAGACCAGGACATAAGGGAAACACAAAATGTCACATGGGGGAGGTGAAAGGTTTGTCTGTCAATGATCAATTAGGAGAACCACCATTGAGGGCTTACCATTTGCAAGGTTTAGTTCCAAGTGCTTATGGAATCATCTCCTTTATCTTTCAAAGTAACCCTATGAGGCAGGTTTTAACAACCCCATTGTACAGGTGAGCAAACTGAGGCTCAGAGAGGTAAATGACAGCTGGTAAGCGACAAAGGCCCAGGATTTGAACTCCAAGCATAAGCTCTTAACCACAAGCATAGTCCAACTTCTCAACACTTCATAGTACTCTTTGCTAGACAGAACTATGTGTGTTTGGGGCCTTTTCCCGTCCCAGTTGTGTTAGTCCGTTTTCACGCTGCTGATAAGGCATACCCAAGACTGGGCAATTTACAAAAGAAAGAGGTTTAATGGACTTACAGTTCCACGTGGCTGGGGAAGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAGTCACGTCTTACATAAACGGCAGCAGGCAAAGAGAGAGCTTGTGCAGGAAAACTCCCCCTTACAGAACCATCAGCTCTCGTGAGACTTATTCACTCTCATGAGAACAGCACGGGAAAGACCCGCCCCCATGATTCAATGACCTCCACCGGGTCTCTCCCACAACAGGTGGGAATGCAAGATGAGATTTGGGTGGGGACACAGCCAAACCATATCATCAGTCATCCCATGTACGCACATAATCTTTTTTCCTTCTCCTTTCAGATAAGTCAGAGACAATAAATAAGATTATAAATAGAAAAACACTATTTTGTAAAATATAAGAAAACAAACAACAGACACTTCACTGAAGATATACAAATGGCAAACAAGCCAATGAAAAGATGTCCAACATGATATGTAATTAGGGAATTGCAAATTAAAACAACAAGATACTACTACACACCTGTTAGAACAGCCCAGATCCAAAACACTGACAACACCAAATGCTAGTGAGGATGTGCGGCAACAGGAACCTCAAACACTGTAAAATGGCCCAGCCGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGAGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGCAGGCACCTGTAGTCCCAGCTATTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAGGATCATGCCACTGTGCTCCAGCCTAGGCAACAGAGCGAGACTCCGTCCCAGATTTTAA	AAATGGTTATTATT	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1869:HG2_PB_pbsv_16420:HG3_PB_pbsv_16064:HG4_PB_pbsv_16343:HG2_Ill_tnscope_1752:HG4_PB_assemblyticsfalcon_10059:HG4_PB_SVrefine2Falcon1Dovetail_10135:HG2_PB_SVrefine2PBcRplusDovetail_4186:HG2_PB_SVrefine2PB10Xhap12_11891:HG2_PB_SVrefine2Falcon2Bionano_8079:HG2_PB_SVrefine2Falcon1plusDovetail_4567:HG2_PB_PB10Xdip_13383:HG2_PB_PB10Xdip_13382:HG2_Ill_SVrefine2DISCOVARplusDovetail_4940:HG2_10X_SVrefine210Xhap12_11360:HG4_PB_SVrefine2PBcRDovetail_8180:HG3_10X_allpass_3125:HG2_10X_allpass_2541:HG4_10X_allpass_2968:HG4_Ill_Krunchall_22409:HG2_Ill_Krunchall_22070:HG4_Ill_MetaSV_1933:HG3_Ill_MetaSV_2003;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11360:HG2_Ill_SVrefine2DISCOVARplusDovetail_4940:HG2_PB_PB10Xdip_13382:HG2_PB_PB10Xdip_13383:HG2_PB_SVrefine2Falcon1plusDovetail_4567:HG2_PB_SVrefine2Falcon2Bionano_8079:HG2_PB_SVrefine2PB10Xhap12_11891:HG2_PB_SVrefine2PBcRplusDovetail_4186:HG4_PB_SVrefine2Falcon1Dovetail_10135:HG4_PB_assemblyticsfalcon_10059;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0342857;ClusterMaxSizeDiff=0.0342857;ClusterMaxEditDist=0.0342857;PBcalls=12;Illcalls=7;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3276;DistBack=-121;DistForward=-3163;DistMin=-3163;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=17:193768-197057;PctSeqSimilarity=0.9988;PctSizeSimilarity=0.9985;PctRecOverlap=0.9976;SizeDiff=-5;StartDistance=0;EndDistance=8;GTMatch=0;TruScore=99;MatchId=1417.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:1/1:2:13:1:5:1/1:0:25:0:16:1/1:0:42:1/1:4:154:1494:.:.
chr17	203332	HG3_Ill_150bpfermikitraw_20558	CAGGGGTGTGGAGACCCTCTTCAGGACTGTACAGGCGAAGCAGGGGGCTGGGAACAAGGCCGGTTATTATAACCCAACAAACTGGGTTCCAAGGAGCCA	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_1077:HG2_PB_assemblyticsfalcon_10248:HG2_PB_assemblyticsPBcR_9883:HG4_PB_assemblyticsfalcon_10061:HG3_PB_assemblyticsfalcon_10236:HG2_PB_pbsv_16421:HG3_PB_pbsv_16065:HG4_PB_pbsv_16344:HG4_Ill_GATKHC_26027:HG3_Ill_GATKHC_25913:HG2_Ill_GATKHC_26078:HG4_PB_SVrefine2Falcon1Dovetail_10136:HG4_PB_SVrefine2PBcRDovetail_8182:HG2_PB_SVrefine2PBcRplusDovetail_4187:HG2_PB_SVrefine2PB10Xhap12_11892:HG2_PB_SVrefine2Falcon2Bionano_8080:HG2_PB_SVrefine2Falcon1plusDovetail_4568:HG2_Ill_SVrefine2DISCOVARplusDovetail_4941:HG2_10X_SVrefine210Xhap12_11361:HG4_Ill_svaba_20317:HG4_Ill_Krunchall_22411:HG4_10X_allpass_2969:HG3_Ill_svaba_20527:HG3_Ill_scalpel_15668:HG3_Ill_manta_3631:HG3_Ill_Krunchall_21663:HG3_Ill_250bpfermikitraw_21137:HG3_Ill_150bpfermikitraw_20558:HG3_10X_allpass_3126:HG2_Ill_svaba_20348:HG2_Ill_scalpel_15370:HG2_Ill_manta_4443:HG2_Ill_SpiralSDKrefine_6460:HG2_Ill_Krunchall_22071:HG2_Ill_250bpfermikitraw_21761:HG2_Ill_150bpfermikitraw_20506:HG4_Ill_Spiral_1277:HG3_Ill_Spiral_16859;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20506:HG2_Ill_250bpfermikitraw_21761:HG2_Ill_Krunchall_22071:HG2_Ill_SpiralSDKrefine_6460:HG2_Ill_manta_4443:HG2_Ill_scalpel_15370:HG2_Ill_svaba_20348:HG3_10X_allpass_3126:HG3_Ill_150bpfermikitraw_20558:HG3_Ill_250bpfermikitraw_21137:HG3_Ill_Krunchall_21663:HG3_Ill_manta_3631:HG3_Ill_scalpel_15668:HG3_Ill_svaba_20527:HG4_10X_allpass_2969:HG4_Ill_Krunchall_22411:HG4_Ill_svaba_20317;NumExactMatchSVs=17;ClusterMaxShiftDist=0.150538;ClusterMaxSizeDiff=0.150538;ClusterMaxEditDist=0.195652;PBcalls=13;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-98;DistBack=-253;DistForward=76;DistMin=-253;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6641;REFWIDENED=17:196768-213292;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1418.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:43:1/1:4:18:1:8:1/1:0:15:0:13:1/1:0:27:./.:.:.:1494:.:.
chr17	267605	HG2_Ill_Krunchall_22076	GATGCAGTGTTTGATGGCTACAGAGACCTAGAACGTGGAGCGGGGCAGGACATCCCAGCAGCCAGGTGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11365:HG3_Ill_Spiral_16864:HG3_PB_assemblyticsfalcon_10250:HG2_PB_pbsv_16433:HG4_PB_pbsv_16357:HG3_PB_pbsv_16074:HG2_PB_HySA_29977:HG4_Ill_svaba_20324:HG4_Ill_GATKHC_26036:HG4_Ill_GATKHCSBGrefine_11133:HG4_Ill_250bpfermikitraw_21426:HG3_Ill_svaba_20533:HG3_Ill_scalpel_15673:HG3_Ill_manta_3633:HG3_Ill_Krunchall_21667:HG3_Ill_GATKHC_25923:HG3_Ill_GATKHCSBGrefine_10739:HG3_Ill_250bpfermikitraw_21141:HG3_Ill_150bpfermikitraw_20562:HG2_Ill_svaba_20354:HG2_Ill_manta_4445:HG2_Ill_SpiralSDKrefine_6465:HG2_Ill_Krunchall_22076:HG2_Ill_GATKHC_26086:HG2_Ill_GATKHCSBGrefine_10794:HG2_Ill_250bpfermikitraw_21767:HG4_Ill_Spiral_1279:HG4_Ill_SVrefine2DISCOVARDovetail_11513:HG3_PB_SVrefine2PBcRDovetail_7920:HG3_Ill_SVrefine2DISCOVARDovetail_11715:HG2_PB_SVrefine2PBcRplusDovetail_4193:HG2_PB_SVrefine2PB10Xhap12_11902:HG2_PB_SVrefine2Falcon1plusDovetail_4576;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21767:HG2_Ill_GATKHCSBGrefine_10794:HG2_Ill_GATKHC_26086:HG2_Ill_Krunchall_22076:HG2_Ill_SpiralSDKrefine_6465:HG2_Ill_manta_4445:HG2_Ill_svaba_20354:HG3_Ill_150bpfermikitraw_20562:HG3_Ill_250bpfermikitraw_21141:HG3_Ill_GATKHCSBGrefine_10739:HG3_Ill_GATKHC_25923:HG3_Ill_Krunchall_21667:HG3_Ill_manta_3633:HG3_Ill_scalpel_15673:HG3_Ill_svaba_20533:HG4_Ill_250bpfermikitraw_21426:HG4_Ill_GATKHCSBGrefine_11133:HG4_Ill_GATKHC_26036:HG4_Ill_svaba_20324;NumExactMatchSVs=19;ClusterMaxShiftDist=0.121212;ClusterMaxSizeDiff=0.121212;ClusterMaxEditDist=0.21374;PBcalls=9;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=13;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-68;DistBack=2477;DistForward=-66;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=118;REFWIDENED=17:267548-267733;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:47:./.:24:16:6:30:1|0:0:16:27:1:0/1:34:12:./.:.:.:.:.:.
chr17	456108	HG4_PB_SVrefine2Falcon1Dovetail_10146	CGCTGCTGTGTAGTGGAGAAAGGGCAGGCAGCGAGCAAGTGTGTACAAGGTATATACGTGCCGCACGCTGCTGTGTAGTGGAGAAAGGGCAGGCAGTGAGCAAGCGTGTACAAGGTATATACGTGCCGCACGCTGCTGTGTAGTGGAGAAAGGGCAGGCAGTGAGCAAGCGTGTACAAGGTATATACGTGCCACATGCTGCTGTGTAGTGGAGAAAGGGCAGGCAGCGAGCAAGTGTGTACAAGGTATATACGTGCCACAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11369:HG2_Ill_MetaSV_1872:HG4_Ill_GATKHCSBGrefine_11136:HG3_10X_allpass_3128:HG2_Ill_GATKHCSBGrefine_10796:HG4_Ill_MetaSV_1935:HG2_PB_pbsv_16435:HG4_PB_pbsv_16364:HG3_PB_pbsv_16082:HG4_PB_SVrefine2PBcRDovetail_8189:HG4_PB_SVrefine2Falcon1Dovetail_10146:HG4_Ill_SVrefine2DISCOVARDovetail_11515:HG3_PB_SVrefine2PBcRDovetail_7925:HG3_PB_SVrefine2Falcon1Dovetail_10165:HG3_Ill_SVrefine2DISCOVARDovetail_11718:HG2_PB_SVrefine2PBcRplusDovetail_4195:HG2_PB_SVrefine2PB10Xhap12_11903:HG2_PB_SVrefine2Falcon2Bionano_8088:HG2_PB_SVrefine2Falcon1plusDovetail_4578:HG2_Ill_SVrefine2DISCOVARplusDovetail_4947;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11369:HG4_PB_SVrefine2PBcRDovetail_8189:HG4_PB_SVrefine2Falcon1Dovetail_10146:HG4_Ill_SVrefine2DISCOVARDovetail_11515:HG3_PB_SVrefine2PBcRDovetail_7925:HG3_PB_SVrefine2Falcon1Dovetail_10165:HG3_Ill_SVrefine2DISCOVARDovetail_11718:HG2_PB_SVrefine2PBcRplusDovetail_4195:HG2_PB_SVrefine2PB10Xhap12_11903:HG2_PB_SVrefine2Falcon2Bionano_8088:HG2_PB_SVrefine2Falcon1plusDovetail_4578:HG2_Ill_SVrefine2DISCOVARplusDovetail_4947;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00766284;ClusterMaxSizeDiff=0.00766284;ClusterMaxEditDist=0.0153257;PBcalls=11;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-260;DistBack=442;DistForward=-222;DistMin=-222;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=238;REFWIDENED=17:456109-456606;PctSeqSimilarity=0.9889;PctSizeSimilarity=1;PctRecOverlap=0.8506;SizeDiff=0;StartDistance=-39;EndDistance=-39;GTMatch=0;TruScore=94;MatchId=1422.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:57:1/1:0:24:0:25:./.:3:2:1:1:0/1:7:13:./.:.:.:.:.:.
chr17	656280	HG2_PB_SVrefine2PBcRplusDovetail_4203	CAAGTGGGAGGCTTGGAGCGCGAAAAAAGGGGCGTCCAAGATGGACGCCATGAGGGGCTACGCGGCCAAAGTGGAGGAGCTGACGAAGAAGG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4585:HG4_PB_pbsv_16385:HG3_PB_SVrefine2Falcon1Dovetail_10180:HG3_PB_assemblyticsfalcon_10275:HG3_PB_pbsv_16097:HG2_PB_pbsv_16448:HG4_Ill_250bpfermikitraw_21439:HG4_PB_SVrefine2PBcRDovetail_8198:HG4_PB_SVrefine2Falcon1Dovetail_10161:HG3_PB_SVrefine2PBcRDovetail_7936:HG3_PB_SVrefine2Falcon1Dovetail_10179:HG2_PB_SVrefine2PBcRplusDovetail_4203:HG2_PB_SVrefine2PB10Xhap12_11911:HG2_PB_SVrefine2Falcon2Bionano_8098;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4585:HG4_PB_SVrefine2PBcRDovetail_8198:HG4_PB_SVrefine2Falcon1Dovetail_10161:HG3_PB_SVrefine2PBcRDovetail_7936:HG3_PB_SVrefine2Falcon1Dovetail_10179:HG2_PB_SVrefine2PBcRplusDovetail_4203:HG2_PB_SVrefine2PB10Xhap12_11911:HG2_PB_SVrefine2Falcon2Bionano_8098;NumExactMatchSVs=8;ClusterMaxShiftDist=0.043956;ClusterMaxSizeDiff=0.043956;ClusterMaxEditDist=0.0883978;PBcalls=13;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-91;DistBack=-9435;DistForward=-92;DistMin=-9435;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=364;REFWIDENED=17:656281-656735;PctSeqSimilarity=0.9839;PctSizeSimilarity=1;PctRecOverlap=0.8696;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=95;MatchId=1423.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:69:./.:0:39:0:4:./.:4:0:5:0:0/0:13:1:./.:.:.:.:.:.
chr17	665646	HG2_PB_SVrefine2PBcRplusDovetail_4204	TCCATCCAGGCCCCGGCCTGCACCTACTCAGTGCGTGATCTTCAGGGATGAAGGGGAATAATTTCATCA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4950:HG4_PB_HySA_23983:HG3_PB_pbsv_16098:HG2_PB_pbsv_16449:HG4_Ill_250bpfermikitraw_21440:HG2_Ill_250bpfermikitraw_21774:HG2_Ill_150bpfermikitraw_20514:HG4_PB_pbsv_16386:HG4_PB_SVrefine2PBcRDovetail_8199:HG4_PB_SVrefine2Falcon1Dovetail_10162:HG3_PB_SVrefine2PBcRDovetail_7937:HG3_PB_SVrefine2Falcon1Dovetail_10181:HG2_PB_SVrefine2PBcRplusDovetail_4204:HG2_PB_SVrefine2PB10Xhap12_11912:HG2_PB_SVrefine2Falcon2Bionano_8099:HG2_PB_SVrefine2Falcon1plusDovetail_4586;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4950:HG4_PB_SVrefine2PBcRDovetail_8199:HG4_PB_SVrefine2Falcon1Dovetail_10162:HG3_PB_SVrefine2PBcRDovetail_7937:HG3_PB_SVrefine2Falcon1Dovetail_10181:HG2_PB_SVrefine2PBcRplusDovetail_4204:HG2_PB_SVrefine2PB10Xhap12_11912:HG2_PB_SVrefine2Falcon2Bionano_8099:HG2_PB_SVrefine2Falcon1plusDovetail_4586;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0294118;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0592593;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-68;DistBack=6924;DistForward=246;DistMin=246;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=308;REFWIDENED=17:665647-666022;PctSeqSimilarity=0.9926;PctSizeSimilarity=1;PctRecOverlap=0.7391;SizeDiff=0;StartDistance=-18;EndDistance=-18;GTMatch=0;TruScore=91;MatchId=1424.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:12:39:1/1:3:17:3:10:./.:3:1:3:0:0/1:4:15:./.:.:.:.:.:.
chr17	801627	HG3_PB_SVrefine2PBcRDovetail_7943	AATTCCCACTCTGCCATCTGGAGCTCGTCCGGACGCCACCTCCTCTGAGAAACTACTCTGAGGCCAGGTGTAATGTCTCACCCCTGTAATCCCAGCACCCTGCCTGGAACAGCTTTGATCTTCTTTACCTACTAACTCTTACTCTGCCGTCAGGAACTCGTCCGGACGCCATCTCCTCTGAGAAACTACTCTGAGGCCAGGCGCAATGTCTCACACCTGTAATCCCAGCACTTTGGGAGGCTAAGGTGGGAGGACCACTTCAGGCCAGGAGTTCAAGACCAGGCTGGGTAAGATGGAGAAATTTCATCTTTACAAAAAATACAAAAATTAGCCAGGACGGTAGTGCACACCTATAGTTCCAAGCTGAGGTGGGAGGACTGCTTGAAACTGGGAGGTCGAGGCTGCAGTGAGCCATGAGGGCACCACTGCACTCCAGCCTGGGTGACAAAACAGACTGTCTCAAAAAAACAAAAACAAAACAAAAAAACTACTCTGAAAGTCATTTCTTCCTATCCCCTCCCTGCAAAGAAGGAAGGACAGGGCTGGGATTCTGCCTCTGTGCATGCTTTTTTTTTTTTTCTTTTTTTTTGAGACAGAGCCTT	GGTAAA	20	PASS	ClusterIDs=HG3_PB_pbsv_16108:HG2_PB_pbsv_16457:HG4_10X_allpass_2974:HG2_Ill_tnscope_1753:HG2_Ill_SpiralSDKrefine_6478:HG4_PB_SVrefine2PBcRDovetail_8206:HG4_PB_SVrefine2Falcon1Dovetail_10172:HG4_Ill_manta_3780:HG4_Ill_SVrefine2DISCOVARDovetail_11527:HG3_PB_assemblyticsfalcon_10289:HG3_PB_SVrefine2PBcRDovetail_7943:HG3_PB_SVrefine2Falcon1Dovetail_10191:HG3_Ill_manta_3634:HG3_Ill_SVrefine2DISCOVARDovetail_11731:HG2_PB_SVrefine2PBcRplusDovetail_4210:HG2_PB_SVrefine2PB10Xhap12_11919:HG2_PB_SVrefine2Falcon2Bionano_8105:HG2_PB_SVrefine2Falcon1plusDovetail_4592:HG2_PB_PB10Xdip_13580:HG2_PB_PB10Xdip_13579:HG2_Ill_manta_4447:HG2_Ill_SVrefine2DISCOVARplusDovetail_4954:HG2_10X_SVrefine210Xhap12_11383:HG2_10X_allpass_2544:HG4_PB_HySA_23993:HG4_Ill_MetaSV_1944:HG3_Ill_MetaSV_2011:HG2_PB_HySA_30003:HG2_Ill_MetaSV_1875:HG4_Ill_Spiral_1281:HG3_Ill_Spiral_16878:HG2_Ill_Spiral_1078:HG4_Ill_Krunchall_22431:HG2_Ill_Krunchall_22087:HG3_PB_assemblyticsfalcon_10288:HG3_10X_allpass_3131:HG4_PB_pbsv_16396;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11383:HG2_Ill_SVrefine2DISCOVARplusDovetail_4954:HG2_Ill_manta_4447:HG2_PB_PB10Xdip_13579:HG2_PB_PB10Xdip_13580:HG2_PB_SVrefine2Falcon1plusDovetail_4592:HG2_PB_SVrefine2Falcon2Bionano_8105:HG2_PB_SVrefine2PB10Xhap12_11919:HG2_PB_SVrefine2PBcRplusDovetail_4210:HG3_Ill_SVrefine2DISCOVARDovetail_11731:HG3_Ill_manta_3634:HG3_PB_SVrefine2Falcon1Dovetail_10191:HG3_PB_SVrefine2PBcRDovetail_7943:HG3_PB_assemblyticsfalcon_10289:HG4_Ill_SVrefine2DISCOVARDovetail_11527:HG4_Ill_manta_3780:HG4_PB_SVrefine2Falcon1Dovetail_10172:HG4_PB_SVrefine2PBcRDovetail_8206;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0200669;ClusterMaxSizeDiff=0.0200669;ClusterMaxEditDist=0.0201511;PBcalls=17;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-596;DistBack=-66;DistForward=-534;DistMin=-534;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=17:801627-802228;PctSeqSimilarity=0.9992;PctSizeSimilarity=0.9933;PctRecOverlap=0.9983;SizeDiff=-4;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1426.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:62:1/1:1:15:0:30:1/1:0:22:0:38:1/1:0:27:1/1:1:29:.:.:.
chr17	910147	HG3_PB_assemblyticsfalcon_10300	GCGCCATGACGTCATGGGACCGTCACCCTCCGCCAGCCACGGGCCCGGGCGGTGCCAGGGTACCTA	G	10	PASS	ClusterIDs=HG2_PB_pbsv_16471:HG3_PB_pbsv_16121:HG4_PB_pbsv_16408:HG4_PB_assemblyticsfalcon_10109:HG3_PB_assemblyticsfalcon_10300;NumClusterSVs=5;ExactMatchIDs=HG3_PB_assemblyticsfalcon_10300:HG4_PB_assemblyticsfalcon_10109;NumExactMatchSVs=2;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.09375;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-65;DistBack=-87;DistForward=108;DistMin=-87;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=389;REFWIDENED=17:909974-910427;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1427.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:24:./.:7:16:12:4:./.:0:0:0:0:./.:0:2:./.:.:.:.:.:.
chr17	1317288	HG3_PB_SVrefine2PBcRDovetail_7963	AGGGTTTCACCATGTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCCACCCGTCTTGGCCTCCCAAAGTGCTGGAATTACAGGCGTGAGCCACCGTGGCCGGCCTTAATTTTTCTATTAGACATG	A	20	PASS	ClusterIDs=HG2_10X_allpass_2549:HG3_PB_pbsv_16153:HG2_PB_pbsv_16504:HG3_PB_SVrefine2PBcRDovetail_7963:HG3_Ill_MetaSV_2020:HG3_Ill_GATKHCSBGrefine_10763:HG2_PB_SVrefine2Falcon2Bionano_8129:HG2_Ill_scalpel_15395:HG2_Ill_MetaSV_1884:HG2_Ill_GATKHC_26134:HG2_Ill_GATKHCSBGrefine_10827;NumClusterSVs=11;ExactMatchIDs=HG2_10X_allpass_2549:HG3_PB_SVrefine2PBcRDovetail_7963:HG3_Ill_MetaSV_2020:HG3_Ill_GATKHCSBGrefine_10763:HG2_PB_SVrefine2Falcon2Bionano_8129:HG2_Ill_scalpel_15395:HG2_Ill_MetaSV_1884:HG2_Ill_GATKHC_26134:HG2_Ill_GATKHCSBGrefine_10827;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00763359;ClusterMaxSizeDiff=0.00760456;ClusterMaxEditDist=0.0152672;PBcalls=4;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-131;DistBack=66830;DistForward=12904;DistMin=12904;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=103;REFWIDENED=17:1317289-1317522;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1429.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:20:./.:14:13:8:5:0|1:22:0:0:6:0/1:27:11:./.:.:.:.:.:.
chr17	1454299	HG3_Ill_150bpfermikitraw_20594	GTTGCGGGGCGGAGTCAGCGGGACCTGATGGGACACGAAGGGCGAGTGAGAGTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11400:HG2_PB_pbsv_16505:HG3_Ill_Krunchall_21694:HG3_Ill_GATKHCSBGrefine_10764:HG3_Ill_250bpfermikitraw_21171:HG3_Ill_150bpfermikitraw_20594:HG3_10X_allpass_3138:HG2_Ill_SpiralSDKrefine_6502:HG2_Ill_Krunchall_22107:HG2_Ill_GATKHCSBGrefine_10828:HG2_Ill_250bpfermikitraw_21802:HG3_PB_pbsv_16154:HG3_PB_SVrefine2Falcon1Dovetail_10226:HG3_Ill_SVrefine2DISCOVARDovetail_11744:HG2_PB_SVrefine2PBcRplusDovetail_4233:HG2_PB_SVrefine2PB10Xhap12_11952:HG2_PB_SVrefine2Falcon1plusDovetail_4625;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21802:HG2_Ill_GATKHCSBGrefine_10828:HG2_Ill_Krunchall_22107:HG2_Ill_SpiralSDKrefine_6502:HG3_10X_allpass_3138:HG3_Ill_150bpfermikitraw_20594:HG3_Ill_250bpfermikitraw_21171:HG3_Ill_GATKHCSBGrefine_10764:HG3_Ill_Krunchall_21694;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0188679;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0747664;PBcalls=6;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-53;DistBack=29073;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=149;REFWIDENED=17:1454256-1454457;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1430.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:28:./.:16:11:0:7:0|1:10:1:0:7:0/1:17:10:./.:.:.:.:.:.
chr17	1654670	HG4_Ill_manta_3783	GTGGCAGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGACAATAAGAGTGAAACTCTGTCTTGAAAAAAAAAAAAAAAGAGGCTGGGTGTGGTTTACAGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTTCTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTGAATCCACGAGGCGGAGGTTGCGGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGTGCGAGACTCCAACTCAAAAGAAAAGAAAAAAAAAGAAATCTTAAGCCAAATCACAATATATTTACACAGCTGGCAAAGTCACAAGAGGGAGGTGTGGGAGGGTGGGGCGGGCAGCACTCGGCAGTGGCTCACCCACAGAACCCAGCTGTGGTATGACAGCCAGTGACCCTGTCTGTGGTACATCTGGAGAAGCTGAGACAAAGACAGGCGATTCCTTACGCCGGGTCACACGGCCAGCTGGTAGCCGGTGAAGAGAGAAAACCACCAGGTATTATTGAGCACCGTCTGTGACAGCGGACACTGCTACAATGTTGTTTTTTTTCTTTTTTTGAGACGGATTTTTACTCCTGTCCCCCAGGCTGGAGTGC	CTCA	20	PASS	ClusterIDs=HG3_10X_allpass_3139:HG4_Ill_GATKHCSBGrefine_11176:HG3_Ill_GATKHCSBGrefine_10767:HG2_Ill_GATKHCSBGrefine_10831:HG4_PB_assemblyticsfalcon_10145:HG4_PB_SVrefine2Falcon1Dovetail_10203:HG4_Ill_manta_3783:HG3_PB_assemblyticsfalcon_10338:HG3_PB_SVrefine2PBcRDovetail_7964:HG3_PB_SVrefine2Falcon1Dovetail_10229:HG3_Ill_SVrefine2DISCOVARDovetail_11745:HG2_PB_SVrefine2PBcRplusDovetail_4234:HG2_PB_SVrefine2PB10Xhap12_11954:HG2_PB_SVrefine2Falcon2Bionano_8133:HG2_PB_SVrefine2Falcon1plusDovetail_4628:HG2_PB_PB10Xdip_12972:HG2_PB_PB10Xdip_12971:HG2_Ill_manta_4450:HG2_Ill_SVrefine2DISCOVARplusDovetail_4974:HG2_10X_SVrefine210Xhap12_11403:HG2_Ill_tnscope_1757:HG4_Ill_MetaSV_1954:HG3_Ill_MetaSV_2021:HG2_Ill_MetaSV_1885:HG2_10X_allpass_2550:HG4_PB_pbsv_16436:HG2_PB_pbsv_16510:HG2_Ill_Krunchall_22109:HG3_PB_pbsv_16157;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11403:HG2_Ill_SVrefine2DISCOVARplusDovetail_4974:HG2_Ill_manta_4450:HG2_PB_PB10Xdip_12971:HG2_PB_PB10Xdip_12972:HG2_PB_SVrefine2Falcon1plusDovetail_4628:HG2_PB_SVrefine2Falcon2Bionano_8133:HG2_PB_SVrefine2PB10Xhap12_11954:HG2_PB_SVrefine2PBcRplusDovetail_4234:HG3_Ill_SVrefine2DISCOVARDovetail_11745:HG3_PB_SVrefine2Falcon1Dovetail_10229:HG3_PB_SVrefine2PBcRDovetail_7964:HG3_PB_assemblyticsfalcon_10338:HG4_Ill_manta_3783:HG4_PB_SVrefine2Falcon1Dovetail_10203:HG4_PB_assemblyticsfalcon_10145;NumExactMatchSVs=16;ClusterMaxShiftDist=0.174815;ClusterMaxSizeDiff=0.174815;ClusterMaxEditDist=0.174815;PBcalls=14;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-727;DistBack=-110;DistForward=12756;DistMin=-110;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=17:1654670-1655400;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9986;PctRecOverlap=0.9973;SizeDiff=-1;StartDistance=-1;EndDistance=1;GTMatch=0;TruScore=99;MatchId=1431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:63:1/1:0:16:0:11:1/1:0:20:0:20:1/1:0:17:0/1:4:15:.:.:.
chr17	2057045	HG2_Ill_SpiralSDKrefine_6510	CTAGAGTGTGACGGTGACTGGGAAACCTGGGGATGCACGTAGAGTGTGATGGTGACTGGGGGAACCTGGGGATGCATG	C	20	PASS	ClusterIDs=HG3_PB_HySA_24905:HG3_PB_pbsv_16165:HG2_PB_pbsv_16515:HG3_Ill_GATKHC_25978:HG2_Ill_SpiralSDKrefine_6510:HG2_Ill_GATKHC_26148:HG2_Ill_GATKHCSBGrefine_10833;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10833:HG2_Ill_GATKHC_26148:HG2_Ill_SpiralSDKrefine_6510:HG3_Ill_GATKHC_25978;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0506329;ClusterMaxSizeDiff=0.0506329;ClusterMaxEditDist=0.101266;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-77;DistBack=-124;DistForward=-31;DistMin=-124;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=730;REFWIDENED=17:2056864-2057670;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1433.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:0|1:11:2:7:24:./.:14:1:0:3:./.:3:1:./.:.:.:.:.:.
chr17	2194920	HG3_Ill_MetaSV_2024	TCTTGGGAGGCTGAGGCTGGAGGATCACTTCGGCCCAGGTGTTTTGAGGCCAGCCTGGGCAACAAAGCAATACCCCGTCTCTACAGAAAAATACTTGTCATCCGGGTGCAGCAGTGTGTGCCTGCAGTCCCAGTTA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11411:HG4_Ill_Krunchall_22463:HG2_PB_pbsv_16516:HG4_PB_pbsv_16439:HG4_PB_HySA_24030:HG4_PB_SVrefine2PBcRDovetail_8229:HG4_PB_SVrefine2Falcon1Dovetail_10210:HG4_Ill_scalpel_15042:HG4_Ill_SVrefine2DISCOVARDovetail_11540:HG4_Ill_MetaSV_1956:HG4_Ill_GATKHCSBGrefine_11178:HG4_10X_allpass_2980:HG3_PB_pbsv_16166:HG3_Ill_MetaSV_2024:HG3_Ill_GATKHCSBGrefine_10772:HG2_PB_SVrefine2PB10Xhap12_11958:HG2_Ill_SpiralSDKrefine_6513:HG2_Ill_MetaSV_1886:HG2_Ill_GATKHCSBGrefine_10835;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11411:HG4_PB_SVrefine2PBcRDovetail_8229:HG4_PB_SVrefine2Falcon1Dovetail_10210:HG4_Ill_scalpel_15042:HG4_Ill_SVrefine2DISCOVARDovetail_11540:HG4_Ill_MetaSV_1956:HG4_Ill_GATKHCSBGrefine_11178:HG4_10X_allpass_2980:HG3_PB_pbsv_16166:HG3_Ill_MetaSV_2024:HG3_Ill_GATKHCSBGrefine_10772:HG2_PB_SVrefine2PB10Xhap12_11958:HG2_Ill_SpiralSDKrefine_6513:HG2_Ill_MetaSV_1886:HG2_Ill_GATKHCSBGrefine_10835;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0147059;ClusterMaxSizeDiff=0.0147059;ClusterMaxEditDist=0.0222222;PBcalls=7;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-135;DistBack=27526;DistForward=-125;DistMin=-125;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2855;REFWIDENED=17:2192093-2204855;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1434.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:28:0|1:37:2:1:26:1|0:0:20:49:1:0/1:28:8:./.:.:.:.:.:.
chr17	2917426	HG2_Ill_scalpel_15409	AGCGTGTGGCTGCCAGCACAGACCTGGATGGTCTAGCCTAGGACACACGTTGGCTATAGG	A	20	PASS	ClusterIDs=HG3_PB_HySA_24919:HG4_PB_assemblyticsfalcon_10170:HG4_PB_pbsv_16451:HG4_PB_HySA_24052:HG2_PB_HySA_30070:HG2_PB_assemblyticsfalcon_10353:HG2_PB_assemblyticsPBcR_9972:HG4_Ill_svaba_20393:HG4_Ill_scalpel_15050:HG4_Ill_Krunchall_22472:HG4_Ill_GATKHC_26121:HG4_Ill_GATKHCSBGrefine_11185:HG4_Ill_250bpfermikitraw_21489:HG4_Ill_150bpfermikitraw_20688:HG3_PB_assemblyticsfalcon_10361:HG3_Ill_svaba_20599:HG3_Ill_scalpel_15705:HG3_Ill_Krunchall_21710:HG3_Ill_GATKHC_25988:HG3_Ill_GATKHCSBGrefine_10777:HG3_Ill_250bpfermikitraw_21183:HG3_Ill_150bpfermikitraw_20608:HG2_Ill_svaba_20423:HG2_Ill_scalpel_15409:HG2_Ill_Krunchall_22128:HG2_Ill_GATKHC_26161:HG2_Ill_GATKHCSBGrefine_10842:HG2_Ill_250bpfermikitraw_21825:HG2_Ill_150bpfermikitraw_20560:HG2_Ill_SpiralSDKrefine_6522:HG2_PB_pbsv_16528:HG3_PB_pbsv_16177;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20560:HG2_Ill_250bpfermikitraw_21825:HG2_Ill_GATKHCSBGrefine_10842:HG2_Ill_GATKHC_26161:HG2_Ill_Krunchall_22128:HG2_Ill_scalpel_15409:HG2_Ill_svaba_20423:HG3_Ill_150bpfermikitraw_20608:HG3_Ill_250bpfermikitraw_21183:HG3_Ill_GATKHCSBGrefine_10777:HG3_Ill_GATKHC_25988:HG3_Ill_Krunchall_21710:HG3_Ill_scalpel_15705:HG3_Ill_svaba_20599:HG3_PB_assemblyticsfalcon_10361:HG4_Ill_150bpfermikitraw_20688:HG4_Ill_250bpfermikitraw_21489:HG4_Ill_GATKHCSBGrefine_11185:HG4_Ill_GATKHC_26121:HG4_Ill_Krunchall_22472:HG4_Ill_scalpel_15050:HG4_Ill_svaba_20393;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.169492;PBcalls=10;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-59;DistBack=13074;DistForward=1006;DistMin=1006;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=157;REFWIDENED=17:2917344-2917559;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1435.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:49:1/1:1:16:3:28:1/1:0:13:0:14:1/1:0:42:./.:.:.:.:.:.
chr17	3368171	HG2_PB_SVrefine2Falcon2Bionano_8143	TGGGAGGGGGGTGGGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCGGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCTCCGTCC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_9974:HG3_PB_assemblyticsfalcon_10364:HG2_PB_assemblyticsfalcon_10356:HG2_PB_SVrefine2Falcon1plusDovetail_4643:HG3_PB_SVrefine2Falcon1Dovetail_10245:HG3_PB_SVrefine2PBcRDovetail_7976:HG4_PB_assemblyticsfalcon_10173:HG4_PB_SVrefine2Falcon1Dovetail_10223:HG2_PB_HySA_30073:HG2_PB_pbsv_16530:HG4_PB_pbsv_16453:HG4_PB_SVrefine2PBcRDovetail_8241:HG4_Ill_GATKHC_26123:HG4_Ill_GATKHCSBGrefine_11186:HG3_PB_pbsv_16179:HG3_Ill_GATKHCSBGrefine_10779:HG2_PB_SVrefine2PBcRplusDovetail_4247:HG2_PB_SVrefine2PB10Xhap12_11970:HG2_PB_SVrefine2Falcon2Bionano_8143:HG2_Ill_scalpel_15410:HG2_Ill_GATKHC_26163:HG2_Ill_GATKHCSBGrefine_10844;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10844:HG2_Ill_GATKHC_26163:HG2_Ill_scalpel_15410:HG2_PB_SVrefine2Falcon2Bionano_8143:HG2_PB_SVrefine2PB10Xhap12_11970:HG2_PB_SVrefine2PBcRplusDovetail_4247:HG3_Ill_GATKHCSBGrefine_10779:HG3_PB_pbsv_16179:HG4_Ill_GATKHCSBGrefine_11186:HG4_Ill_GATKHC_26123:HG4_PB_SVrefine2PBcRDovetail_8241:HG4_PB_pbsv_16453;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0977444;ClusterMaxSizeDiff=0.0902256;ClusterMaxEditDist=0.238806;PBcalls=16;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-129;DistBack=29529;DistForward=34523;DistMin=29529;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=541;REFWIDENED=17:3367679-3368348;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:46:./.:0:1:2:39:./.:0:2:1:1:1/1:0:18:./.:.:.:.:.:.
chr17	3833409	HG4_PB_SVrefine2Falcon1Dovetail_10230	TCCTGGACCCCTGACCCTCAGACACTGATACTGGAACCCCCAGCCCTCAGCCCCCACTCCTCGGCCCCAGCTCCAGGCCCTGCGCCCAGCCCA	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_10369:HG4_PB_assemblyticsfalcon_10183:HG2_PB_pbsv_16539:HG4_PB_pbsv_16463:HG3_PB_pbsv_16188:HG4_PB_HySA_24066:HG4_PB_SVrefine2PBcRDovetail_8246:HG4_PB_SVrefine2Falcon1Dovetail_10230:HG4_Ill_SVrefine2DISCOVARDovetail_11554:HG4_Ill_GATKHCSBGrefine_11193:HG4_Ill_250bpfermikitraw_21498:HG4_Ill_150bpfermikitraw_20695:HG3_PB_SVrefine2Falcon1Dovetail_10250:HG3_Ill_manta_3638:HG3_Ill_SVrefine2DISCOVARDovetail_11760:HG3_Ill_GATKHCSBGrefine_10783:HG3_Ill_250bpfermikitraw_21197:HG2_PB_SVrefine2PBcRplusDovetail_4252:HG2_PB_SVrefine2PB10Xhap12_11976:HG2_PB_SVrefine2Falcon2Bionano_8147:HG2_PB_SVrefine2Falcon1plusDovetail_4648:HG2_Ill_manta_4451:HG2_Ill_SpiralSDKrefine_6530:HG2_Ill_GATKHCSBGrefine_10848:HG2_10X_SVrefine210Xhap12_11432:HG3_PB_assemblyticsfalcon_10374;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11432:HG2_Ill_GATKHCSBGrefine_10848:HG2_Ill_SpiralSDKrefine_6530:HG2_Ill_manta_4451:HG2_PB_SVrefine2Falcon1plusDovetail_4648:HG2_PB_SVrefine2Falcon2Bionano_8147:HG2_PB_SVrefine2PB10Xhap12_11976:HG2_PB_SVrefine2PBcRplusDovetail_4252:HG3_Ill_250bpfermikitraw_21197:HG3_Ill_GATKHCSBGrefine_10783:HG3_Ill_SVrefine2DISCOVARDovetail_11760:HG3_Ill_manta_3638:HG3_PB_SVrefine2Falcon1Dovetail_10250:HG4_Ill_150bpfermikitraw_20695:HG4_Ill_250bpfermikitraw_21498:HG4_Ill_GATKHCSBGrefine_11193:HG4_Ill_SVrefine2DISCOVARDovetail_11554:HG4_PB_SVrefine2Falcon1Dovetail_10230:HG4_PB_SVrefine2PBcRDovetail_8246;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0215054;ClusterMaxSizeDiff=0.0215054;ClusterMaxEditDist=0.0217391;PBcalls=14;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-92;DistBack=6356;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=96;REFWIDENED=17:3833410-3833597;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1437.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:20:3:0:21:./.:0:7:12:1:0/1:9:9:./.:.:.:.:.:.
chr17	4035954	HG2_Ill_GATKHCSBGrefine_10855	ATCTCTACTAAAAATACAAAAAATTAGCCGGGTGTGGTGGCGGGCGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAAGTCAGGAGATCAAGACCATCCTGGCTAACACGATGAAACCCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11436:HG2_PB_pbsv_16543:HG2_PB_SVrefine2PBcRplusDovetail_4253:HG2_PB_assemblyticsPBcR_9991:HG4_PB_pbsv_16465:HG4_Ill_GATKHCSBGrefine_11196:HG4_10X_allpass_2983:HG3_Ill_GATKHCSBGrefine_10785:HG3_10X_allpass_3145:HG2_Ill_GATKHCSBGrefine_10855:HG2_10X_allpass_2551:HG3_PB_pbsv_16190:HG4_Ill_SVrefine2DISCOVARDovetail_11556:HG3_PB_SVrefine2PBcRDovetail_7982:HG2_PB_SVrefine2Falcon2Bionano_8149:HG2_Ill_SVrefine2DISCOVARplusDovetail_4992;NumClusterSVs=16;ExactMatchIDs=HG2_10X_allpass_2551:HG2_Ill_GATKHCSBGrefine_10855:HG3_10X_allpass_3145:HG3_Ill_GATKHCSBGrefine_10785:HG4_10X_allpass_2983:HG4_Ill_GATKHCSBGrefine_11196;NumExactMatchSVs=6;ClusterMaxShiftDist=0.178082;ClusterMaxSizeDiff=0.178082;ClusterMaxEditDist=0.356164;PBcalls=7;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-134;DistBack=9361;DistForward=25272;DistMin=9361;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=302;REFWIDENED=17:4035730-4036165;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1438.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:20:0|1:22:4:1:11:1|0:0:6:28:0:0/1:37:24:./.:.:.:.:.:.
chr17	4447449	HG3_Ill_svaba_20621	AGCACAGCCCCACTTGAGACTGTCAAGGGCAGGGATGGACCCCAGCTCCAGGGCACTGTTG	A	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_10385:HG3_PB_HySA_24952:HG2_PB_pbsv_16550:HG3_PB_pbsv_16196:HG4_PB_assemblyticsfalcon_10196:HG3_PB_assemblyticsfalcon_10383:HG3_PB_SVrefine2PBcRDovetail_7986:HG3_Ill_svaba_20621:HG3_Ill_scalpel_15722:HG3_Ill_SVrefine2DISCOVARDovetail_11769:HG3_Ill_Krunchall_21730:HG3_Ill_GATKHCSBGrefine_10788:HG3_Ill_250bpfermikitraw_21205:HG3_Ill_150bpfermikitraw_20628:HG3_10X_allpass_3146:HG2_PB_SVrefine2PBcRplusDovetail_4257:HG2_PB_SVrefine2PB10Xhap12_11982:HG2_PB_SVrefine2Falcon2Bionano_8152:HG2_Ill_svaba_20445:HG2_Ill_scalpel_15431:HG2_Ill_manta_4452:HG2_Ill_SpiralSDKrefine_6542:HG2_Ill_GATKHCSBGrefine_10858:HG2_Ill_250bpfermikitraw_21847:HG2_10X_SVrefine210Xhap12_11440;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11440:HG2_Ill_250bpfermikitraw_21847:HG2_Ill_GATKHCSBGrefine_10858:HG2_Ill_SpiralSDKrefine_6542:HG2_Ill_manta_4452:HG2_Ill_scalpel_15431:HG2_Ill_svaba_20445:HG2_PB_SVrefine2Falcon2Bionano_8152:HG2_PB_SVrefine2PB10Xhap12_11982:HG2_PB_SVrefine2PBcRplusDovetail_4257:HG3_10X_allpass_3146:HG3_Ill_150bpfermikitraw_20628:HG3_Ill_250bpfermikitraw_21205:HG3_Ill_GATKHCSBGrefine_10788:HG3_Ill_Krunchall_21730:HG3_Ill_SVrefine2DISCOVARDovetail_11769:HG3_Ill_scalpel_15722:HG3_Ill_svaba_20621:HG3_PB_SVrefine2PBcRDovetail_7986:HG3_PB_assemblyticsfalcon_10383:HG4_PB_assemblyticsfalcon_10196;NumExactMatchSVs=21;ClusterMaxShiftDist=0.101695;ClusterMaxSizeDiff=0.101695;ClusterMaxEditDist=0.12069;PBcalls=10;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=12;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-60;DistBack=24544;DistForward=-53;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=64;REFWIDENED=17:4447450-4447573;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:26:./.:11:12:11:10:0|1:7:0:0:9:0/1:34:22:./.:.:.:.:.:.
chr17	5109458	HG4_Ill_scalpel_15072	TAGTCTCAAACTCCTGACCTCAAGTGATCCGCCTGCCTTGGCCTCCTAAAGTGCTGAGATTACAGGCATGAGCCACCGCACCTGGCCAAGCATCAGTTCTTAAAACAGTTAAGGTGGCAGAACAGGAGTTCTTTCAAAATGATGATTTTCAGTATTTGTGGGTATTTCAACATCATCATAGTCATCTTCAGGTTCA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_16560:HG2_PB_SVrefine2PBcRplusDovetail_4266:HG4_PB_HySA_24085:HG4_Ill_MetaSV_1967:HG2_Ill_MetaSV_1899:HG4_PB_pbsv_16478:HG4_PB_SVrefine2PBcRDovetail_8257:HG4_Ill_scalpel_15072:HG4_Ill_manta_3787:HG4_Ill_SVrefine2DISCOVARDovetail_11565:HG4_Ill_GATKHCSBGrefine_11202:HG2_PB_SVrefine2PB10Xhap12_11990:HG2_PB_SVrefine2Falcon2Bionano_8160:HG2_Ill_scalpel_15435:HG2_Ill_SpiralSDKrefine_6548:HG2_Ill_SVrefine2DISCOVARplusDovetail_5002:HG2_Ill_GATKHCSBGrefine_10863:HG2_10X_SVrefine210Xhap12_11448;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11448:HG2_Ill_GATKHCSBGrefine_10863:HG2_Ill_SVrefine2DISCOVARplusDovetail_5002:HG2_Ill_SpiralSDKrefine_6548:HG2_Ill_scalpel_15435:HG2_PB_SVrefine2Falcon2Bionano_8160:HG2_PB_SVrefine2PB10Xhap12_11990:HG4_Ill_GATKHCSBGrefine_11202:HG4_Ill_SVrefine2DISCOVARDovetail_11565:HG4_Ill_manta_3787:HG4_Ill_scalpel_15072:HG4_PB_SVrefine2PBcRDovetail_8257:HG4_PB_pbsv_16478;NumExactMatchSVs=13;ClusterMaxShiftDist=0.185273;ClusterMaxSizeDiff=0.185273;ClusterMaxEditDist=0.190931;PBcalls=7;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-195;DistBack=77763;DistForward=-196;DistMin=-196;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=17:5109459-5109654;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:20:0|1:14:1:1:10:1|0:0:13:29:0:0/1:36:14:./.:.:.:.:.:.
chr17	5185391	HG2_Ill_GATKHCSBGrefine_10866	GCCGCGCTCCCTCCGCGCTCCCTCCGCGCTCCCTCCGCGCTCCCTCCGCGCTCCCT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11449:HG4_Ill_Krunchall_22493:HG4_Ill_GATKHC_26154:HG4_Ill_GATKHCSBGrefine_11204:HG4_Ill_250bpfermikitraw_21511:HG4_Ill_150bpfermikitraw_20707:HG2_Ill_SpiralSDKrefine_6549:HG2_Ill_GATKHC_26197:HG2_Ill_GATKHCSBGrefine_10866:HG2_Ill_250bpfermikitraw_21852:HG2_Ill_150bpfermikitraw_20582:HG2_PB_assemblyticsfalcon_10399:HG2_PB_pbsv_16562:HG4_Ill_SVrefine2DISCOVARDovetail_11567:HG3_PB_assemblyticsfalcon_10395:HG3_Ill_Spiral_16924:HG3_Ill_Krunchall_21733:HG3_Ill_GATKHC_26025:HG3_Ill_GATKHCSBGrefine_10791:HG3_Ill_250bpfermikitraw_21210:HG3_Ill_150bpfermikitraw_20632:HG2_Ill_SVrefine2DISCOVARplusDovetail_5003;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20582:HG2_Ill_250bpfermikitraw_21852:HG2_Ill_GATKHCSBGrefine_10866:HG2_Ill_GATKHC_26197:HG2_Ill_SpiralSDKrefine_6549:HG4_Ill_150bpfermikitraw_20707:HG4_Ill_250bpfermikitraw_21511:HG4_Ill_GATKHCSBGrefine_11204:HG4_Ill_GATKHC_26154:HG4_Ill_Krunchall_22493;NumExactMatchSVs=10;ClusterMaxShiftDist=0.235294;ClusterMaxSizeDiff=0.235294;ClusterMaxEditDist=0.237624;PBcalls=3;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-55;DistBack=40758;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=67;REFWIDENED=17:5185379-5185500;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1443.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:29:1|0:2:22:21:2:./.:0:8:3:1:0/1:24:20:./.:.:.:.:.:.
chr17	5933606	HG2_10X_SVrefine210Xhap12_11456	TCAGCCATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_16929:HG2_PB_HySA_30134:HG3_PB_assemblyticsfalcon_10407:HG2_PB_assemblyticsfalcon_10409:HG2_PB_assemblyticsPBcR_10024:HG3_Ill_Krunchall_21740:HG2_Ill_Krunchall_22160:HG3_PB_pbsv_16215:HG4_PB_pbsv_16490:HG4_Ill_MetaSV_1971:HG2_Ill_tnscope_1758:HG4_PB_SVrefine2PBcRDovetail_8261:HG4_PB_SVrefine2Falcon1Dovetail_10246:HG4_Ill_scalpel_15078:HG4_Ill_manta_3790:HG4_Ill_SVrefine2DISCOVARDovetail_11569:HG4_Ill_GATKHCSBGrefine_11213:HG4_10X_allpass_2986:HG3_Ill_scalpel_15731:HG3_Ill_manta_3642:HG3_Ill_SVrefine2DISCOVARDovetail_11779:HG3_Ill_MetaSV_2041:HG3_Ill_GATKHCSBGrefine_10794:HG2_PB_pbsv_16569:HG2_PB_SVrefine2PB10Xhap12_11995:HG2_PB_SVrefine2Falcon2Bionano_8165:HG2_PB_SVrefine2Falcon1plusDovetail_4664:HG2_Ill_scalpel_15440:HG2_Ill_manta_4456:HG2_Ill_SVrefine2DISCOVARplusDovetail_5008:HG2_Ill_MetaSV_1902:HG2_Ill_GATKHCSBGrefine_10870:HG2_10X_allpass_2552:HG2_10X_SVrefine210Xhap12_11456:HG2_Ill_breakscan11_2378;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11456:HG2_10X_allpass_2552:HG2_Ill_GATKHCSBGrefine_10870:HG2_Ill_MetaSV_1902:HG2_Ill_SVrefine2DISCOVARplusDovetail_5008:HG2_Ill_manta_4456:HG2_Ill_scalpel_15440:HG2_PB_SVrefine2Falcon1plusDovetail_4664:HG2_PB_SVrefine2Falcon2Bionano_8165:HG2_PB_SVrefine2PB10Xhap12_11995:HG2_PB_pbsv_16569:HG3_Ill_GATKHCSBGrefine_10794:HG3_Ill_MetaSV_2041:HG3_Ill_SVrefine2DISCOVARDovetail_11779:HG3_Ill_manta_3642:HG3_Ill_scalpel_15731:HG4_10X_allpass_2986:HG4_Ill_GATKHCSBGrefine_11213:HG4_Ill_SVrefine2DISCOVARDovetail_11569:HG4_Ill_manta_3790:HG4_Ill_scalpel_15078:HG4_PB_SVrefine2Falcon1Dovetail_10246:HG4_PB_SVrefine2PBcRDovetail_8261;NumExactMatchSVs=23;ClusterMaxShiftDist=0.099839;ClusterMaxSizeDiff=0.099839;ClusterMaxEditDist=0.099839;PBcalls=12;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=22345;DistForward=25220;DistMin=22345;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=17:5933607-5933939;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1444.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:3:21:0:16:1/1:0:31:0:28:1/1:0:51:0/1:2:9:.:.:.
chr17	6036573	HG4_Ill_GATKHC_26171	CACCATGTCGGCCAGGCTGGTCTCAAACTCCCGACCACAGGTGACCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCCCCTAGCCAAATTTTGGCATTTTTAGTACAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11458:HG3_PB_assemblyticsfalcon_10409:HG4_Ill_Krunchall_22504:HG2_Ill_Krunchall_22163:HG2_PB_HySA_30137:HG4_PB_pbsv_16492:HG4_PB_HySA_24109:HG2_PB_pbsv_16571:HG4_PB_SVrefine2PBcRDovetail_8262:HG4_Ill_svaba_20427:HG4_Ill_scalpel_15079:HG4_Ill_manta_3791:HG4_Ill_MetaSV_1972:HG4_Ill_GATKHC_26171:HG4_Ill_GATKHCSBGrefine_11215:HG4_10X_allpass_2987:HG2_PB_SVrefine2PB10Xhap12_11996:HG2_PB_SVrefine2Falcon1plusDovetail_4665:HG2_Ill_svaba_20457:HG2_Ill_scalpel_15442:HG2_Ill_manta_4457:HG2_Ill_SVrefine2DISCOVARplusDovetail_5009:HG2_Ill_MetaSV_1903:HG2_Ill_GATKHC_26209:HG2_Ill_GATKHCSBGrefine_10871:HG2_10X_allpass_2553;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11458:HG4_PB_SVrefine2PBcRDovetail_8262:HG4_Ill_svaba_20427:HG4_Ill_scalpel_15079:HG4_Ill_manta_3791:HG4_Ill_MetaSV_1972:HG4_Ill_GATKHC_26171:HG4_Ill_GATKHCSBGrefine_11215:HG4_10X_allpass_2987:HG2_PB_SVrefine2PB10Xhap12_11996:HG2_PB_SVrefine2Falcon1plusDovetail_4665:HG2_Ill_svaba_20457:HG2_Ill_scalpel_15442:HG2_Ill_manta_4457:HG2_Ill_SVrefine2DISCOVARplusDovetail_5009:HG2_Ill_MetaSV_1903:HG2_Ill_GATKHC_26209:HG2_Ill_GATKHCSBGrefine_10871:HG2_10X_allpass_2553;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0158103;ClusterMaxSizeDiff=0.015748;ClusterMaxEditDist=0.102767;PBcalls=8;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=1;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-126;DistBack=5681;DistForward=-34;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=94;REFWIDENED=17:6036574-6036793;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1445.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:27:0|1:35:1:0:26:1|0:0:23:24:0:0/1:46:30:./.:.:.:.:.:.
chr17	6847402	HG2_10X_allpass_2554	TAAACGTTAGACTTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAATTAAAGAGCTTCTGTACAGCAAAAGAAACTACCATCAGAGTGATGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAAAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGAATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGAGATCTAGAACTAGAAATACCATTCGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTGTAAATCATGCTGCTATAAAGACACATGCACACGTACGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_16498:HG3_PB_assemblyticsfalcon_10416:HG4_PB_HySA_24118:HG2_PB_HySA_30150:HG2_Ill_tnscope_1759:HG4_PB_assemblyticsfalcon_10222:HG4_PB_SVrefine2PBcRDovetail_8266:HG4_PB_SVrefine2Falcon1Dovetail_10249:HG4_Ill_MetaSV_1974:HG4_Ill_GATKHCSBGrefine_11219:HG4_10X_allpass_2988:HG2_PB_pbsv_16577:HG2_PB_SVrefine2PB10Xhap12_12001:HG2_Ill_SVrefine2DISCOVARplusDovetail_5011:HG2_Ill_MetaSV_1905:HG2_Ill_GATKHCSBGrefine_10874:HG2_10X_allpass_2554;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_2554:HG2_Ill_GATKHCSBGrefine_10874:HG2_Ill_MetaSV_1905:HG2_Ill_SVrefine2DISCOVARplusDovetail_5011:HG2_PB_SVrefine2PB10Xhap12_12001:HG2_PB_pbsv_16577:HG4_10X_allpass_2988:HG4_Ill_GATKHCSBGrefine_11219:HG4_Ill_MetaSV_1974:HG4_PB_SVrefine2Falcon1Dovetail_10249:HG4_PB_SVrefine2PBcRDovetail_8266:HG4_PB_assemblyticsfalcon_10222;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00678887;ClusterMaxSizeDiff=0.00678887;ClusterMaxEditDist=0.00951087;PBcalls=9;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-736;DistBack=20080;DistForward=-734;DistMin=-734;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=17:6847403-6848141;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1447.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:23:0|1:33:0:0:21:1|0:0:12:43:0:0/1:55:15:0/1:48:14:.:.:.
chr17	7264544	HG2_PB_SVrefine2Falcon1plusDovetail_4674	AAAAAAAAAAAAAATTAGCTGGGTGTGATGGCGCATGCCTGTGGTCCCAGCTACTCAGGAGGCTGAGGTGAGAAGATCGCTTGAACCCAGGAGGTCAAAGCTGAAGTGAGCTGACATCACACCACTGCACTCCAGCTTGGGTGACAGAGTGAGACCCTGTCTTAAAAAAAAAAAAAAGAAAGAAACACAAACTCCTCCAACCTCTCATGCCACATGCTCAGGAAGAGCTTACTAGAGGAATTTATATCACAAGGGTTCAGAGAAGGGGCTGGGGTTGTCAAGGACATACCCTGGAGTCTGCCATGTGCCAAACACTGTGGAAACAAAGATAAAAAACCACTAGGTGGGTAGGCACGGTGGCTCATGCCTGTAATCCCAGACTTTGGGAGGCCAGGGTGGTTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCACATCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCAGGTGCCTGTAATCCTAGCTACTCTGGAGGCTGAGGCAGTAGAATCGATTGAACCCAGGAGTAGGAGGTTGCAGTGAGCCAAGATTATGCCACTGCACTCCAGCCTGGGTGATGGAGCGAGACTCGGTCTCGAAAACAAACAAACAAACAAACAAAAAACCTGTTAGCTGGTGGTTTAATAGGGCAGGGCATGGTTTGGAGGGAAGATGGATTGGTAAAGAAACACCACCACCTTGATGTGACACAGCTGAGGGATGTCTAGAGAAGGGACACCCCCAGGGGCTCAGAGAAGGATTCTCAGAAGAGGTTGTGCCTGAGCCAAAGGAGAAAGACATCCCAGGTATAAGGACAAGCCTGGGCAATGACAGATGAAAAAGCAGGAGGTGTTTGGGCAGCTACAGGTGATTCAGTATGGCCGTGGGGGGTGCGTTGGGTGGGCAGTGCTGAGAGATAAAGCCGCAGGGACATGTGGGGGCCAGATTCCAGGAAGTATTACACAGGTAGATCACTTGCTTACTGATGAGAAGTGGGCATGTGGGCATGGCAGGAAGAGAAGAAGGAAGAGAATGTCCAGGGTACAGTTGGCGCTGCCACGAAGCTCCAGAGAGGTCACAGAGAAGTGATGGGCTCAGGGAGGAAGGTGAGCTTGAACATATGGAATCTGAGATGCCCGGGCAGGGGCATTCAAGTGGAGATTCCAGGTAGGGCTACCTTTGAACAGCTCTGGCCTGAGGAGCAGATATAACAAGTGGGAGCTGCTGATGGAAAGCCTGGAATGTCAGGGTAAATAGAGGCCAGGCCGGGCGCGGTGGCTTACGTCCGTATCCCAGCACTTTGGGAGGCTGAGGCGGGCGTATCACCAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTACT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4674:HG3_PB_assemblyticsfalcon_10425:HG3_10X_allpass_3152:HG2_10X_allpass_2555:HG3_Ill_MetaSV_2045:HG3_PB_pbsv_16230:HG2_PB_HySA_30161:HG2_PB_pbsv_16582:HG4_PB_SVrefine2Falcon1Dovetail_10256:HG3_PB_SVrefine2PBcRDovetail_8004:HG2_PB_SVrefine2PB10Xhap12_12007;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4674:HG4_PB_SVrefine2Falcon1Dovetail_10256:HG3_PB_SVrefine2PBcRDovetail_8004:HG2_PB_SVrefine2PB10Xhap12_12007;NumExactMatchSVs=4;ClusterMaxShiftDist=0.161207;ClusterMaxSizeDiff=0.161207;ClusterMaxEditDist=0.161207;PBcalls=8;Illcalls=1;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=-1411;DistBack=41820;DistForward=-1389;DistMin=-1389;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=179;REFWIDENED=17:7264545-7266134;PctSeqSimilarity=0.9786;PctSizeSimilarity=1;PctRecOverlap=0.9865;SizeDiff=0;StartDistance=-19;EndDistance=-19;GTMatch=0;TruScore=98;MatchId=1448.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:25:./.:7:18:15:4:./.:36:0:2:7:0/0:23:0:0/1:134:42:1538:.:.
chr17	9129754	HG3_Ill_svaba_20658	CGGTCTCGTGGGGAGGCTGTCTCGTGGGGAGGCTGTCTCGTGGGGAGGCGGTCTCGTGGGGAGGTGGTCTCGTGGGGAGGT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_16515:HG3_PB_assemblyticsfalcon_10449:HG3_PB_HySA_25015:HG4_PB_HySA_24151:HG4_Ill_GATKHC_26216:HG2_Ill_breakscan11_2379:HG4_Ill_GATKHCSBGrefine_11234:HG3_Ill_GATKHC_26078:HG2_Ill_GATKHC_26258:HG2_Ill_GATKHCSBGrefine_10885:HG4_Ill_manta_3795:HG2_Ill_manta_4463:HG2_Ill_SpiralSDKrefine_6583:HG4_Ill_Spiral_1287:HG2_Ill_Spiral_1083:HG4_Ill_svaba_20460:HG4_Ill_Krunchall_22544:HG4_Ill_250bpfermikitraw_21559:HG4_Ill_150bpfermikitraw_20757:HG3_Ill_svaba_20658:HG3_Ill_Krunchall_21776:HG3_Ill_250bpfermikitraw_21249:HG3_Ill_150bpfermikitraw_20677:HG2_Ill_svaba_20490:HG2_Ill_Krunchall_22199:HG2_Ill_250bpfermikitraw_21902:HG2_Ill_150bpfermikitraw_20630:HG4_PB_assemblyticsfalcon_10255:HG2_PB_assemblyticsfalcon_10453:HG2_PB_assemblyticsPBcR_10067:HG2_PB_pbsv_16593:HG3_PB_pbsv_16242;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20630:HG2_Ill_250bpfermikitraw_21902:HG2_Ill_Krunchall_22199:HG2_Ill_svaba_20490:HG3_Ill_150bpfermikitraw_20677:HG3_Ill_250bpfermikitraw_21249:HG3_Ill_Krunchall_21776:HG3_Ill_svaba_20658:HG4_Ill_150bpfermikitraw_20757:HG4_Ill_250bpfermikitraw_21559:HG4_Ill_Krunchall_22544:HG4_Ill_svaba_20460;NumExactMatchSVs=12;ClusterMaxShiftDist=0.231293;ClusterMaxSizeDiff=0.231293;ClusterMaxEditDist=0.244898;PBcalls=9;Illcalls=23;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=-80;DistBack=22170;DistForward=-28;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=65;REFWIDENED=17:9129728-9129872;PctSeqSimilarity=0.9938;PctSizeSimilarity=0.9875;PctRecOverlap=0.9877;SizeDiff=1;StartDistance=0;EndDistance=1;GTMatch=0;TruScore=98;MatchId=1449.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:29:0:1:28:./.:0:6:7:1:0/1:9:17:./.:.:.:.:.:.
chr17	9199087	HG4_10X_allpass_2992	TGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGACAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACCAAAAATACAAAAAATTAGCCAGGTGTGGCCAGGC	T	20	PASS	ClusterIDs=HG3_PB_HySA_25016:HG4_PB_HySA_24153:HG2_PB_HySA_30195:HG2_PB_pbsv_16594:HG3_PB_pbsv_16243:HG4_PB_pbsv_16516:HG3_Ill_MetaSV_2050:HG4_PB_SVrefine2PBcRDovetail_8280:HG4_PB_SVrefine2Falcon1Dovetail_10267:HG4_Ill_scalpel_15115:HG4_Ill_SVrefine2DISCOVARDovetail_11588:HG4_Ill_GATKHC_26217:HG4_Ill_GATKHCSBGrefine_11235:HG4_Ill_150bpfermikitraw_20759:HG4_10X_allpass_2992:HG3_PB_assemblyticsfalcon_10452:HG3_PB_SVrefine2PBcRDovetail_8014:HG3_Ill_scalpel_15762:HG3_Ill_GATKHC_26080:HG3_Ill_GATKHCSBGrefine_10808:HG2_PB_SVrefine2PB10Xhap12_12021:HG2_PB_SVrefine2Falcon2Bionano_8181:HG2_Ill_scalpel_15472:HG2_Ill_SpiralSDKrefine_6584:HG2_Ill_GATKHC_26260:HG2_Ill_GATKHCSBGrefine_10886:HG4_PB_assemblyticsfalcon_10256;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10886:HG2_Ill_GATKHC_26260:HG2_Ill_SpiralSDKrefine_6584:HG2_Ill_scalpel_15472:HG2_PB_SVrefine2Falcon2Bionano_8181:HG2_PB_SVrefine2PB10Xhap12_12021:HG3_Ill_GATKHCSBGrefine_10808:HG3_Ill_GATKHC_26080:HG3_Ill_scalpel_15762:HG3_PB_SVrefine2PBcRDovetail_8014:HG3_PB_assemblyticsfalcon_10452:HG4_10X_allpass_2992:HG4_Ill_150bpfermikitraw_20759:HG4_Ill_GATKHCSBGrefine_11235:HG4_Ill_GATKHC_26217:HG4_Ill_SVrefine2DISCOVARDovetail_11588:HG4_Ill_scalpel_15115:HG4_PB_SVrefine2Falcon1Dovetail_10267:HG4_PB_SVrefine2PBcRDovetail_8280;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0204778;ClusterMaxSizeDiff=0.0204778;ClusterMaxEditDist=0.04811;PBcalls=13;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-146;DistBack=40212;DistForward=-112;DistMin=-112;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=130;REFWIDENED=17:9199088-9199363;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1450.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:27:0|1:16:2:3:22:1|0:0:8:24:0:0/1:23:10:./.:.:.:.:.:.
chr17	10203420	HG4_Ill_manta_3796	CAAGATCCTGATTCAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTCCTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11481:HG3_PB_assemblyticsfalcon_10459:HG4_Ill_Krunchall_22555:HG3_Ill_Krunchall_21787:HG2_PB_pbsv_16600:HG2_Ill_Krunchall_22211:HG4_PB_assemblyticsfalcon_10264:HG2_PB_assemblyticsfalcon_10463:HG2_PB_assemblyticsPBcR_10078:HG4_PB_pbsv_16522:HG3_PB_pbsv_16249:HG3_PB_HySA_25027:HG4_Ill_MetaSV_1980:HG3_Ill_MetaSV_2052:HG2_PB_HySA_30209:HG2_Ill_tnscope_1760:HG2_Ill_MetaSV_1911:HG4_PB_SVrefine2PBcRDovetail_8284:HG4_PB_SVrefine2Falcon1Dovetail_10273:HG4_Ill_scalpel_15125:HG4_Ill_manta_3796:HG4_Ill_SVrefine2DISCOVARDovetail_11595:HG4_Ill_GATKHCSBGrefine_11249:HG4_10X_allpass_2993:HG3_Ill_scalpel_15769:HG3_Ill_manta_3645:HG3_Ill_SVrefine2DISCOVARDovetail_11808:HG3_Ill_GATKHCSBGrefine_10813:HG3_10X_allpass_3155:HG2_PB_SVrefine2PBcRplusDovetail_4292:HG2_PB_SVrefine2PB10Xhap12_12026:HG2_PB_SVrefine2Falcon2Bionano_8186:HG2_PB_SVrefine2Falcon1plusDovetail_4687:HG2_Ill_scalpel_15480:HG2_Ill_manta_4464:HG2_Ill_breakscan11_2381:HG2_Ill_SVrefine2DISCOVARplusDovetail_5030:HG2_Ill_GATKHCSBGrefine_10893:HG2_10X_allpass_2556;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11481:HG4_PB_SVrefine2PBcRDovetail_8284:HG4_PB_SVrefine2Falcon1Dovetail_10273:HG4_Ill_scalpel_15125:HG4_Ill_manta_3796:HG4_Ill_SVrefine2DISCOVARDovetail_11595:HG4_Ill_GATKHCSBGrefine_11249:HG4_10X_allpass_2993:HG3_Ill_scalpel_15769:HG3_Ill_manta_3645:HG3_Ill_SVrefine2DISCOVARDovetail_11808:HG3_Ill_GATKHCSBGrefine_10813:HG3_10X_allpass_3155:HG2_PB_SVrefine2PBcRplusDovetail_4292:HG2_PB_SVrefine2PB10Xhap12_12026:HG2_PB_SVrefine2Falcon2Bionano_8186:HG2_PB_SVrefine2Falcon1plusDovetail_4687:HG2_Ill_scalpel_15480:HG2_Ill_manta_4464:HG2_Ill_breakscan11_2381:HG2_Ill_SVrefine2DISCOVARplusDovetail_5030:HG2_Ill_GATKHCSBGrefine_10893:HG2_10X_allpass_2556;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0782609;ClusterMaxSizeDiff=0.0782609;ClusterMaxEditDist=0.0782609;PBcalls=15;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-351;DistBack=51082;DistForward=26366;DistMin=26366;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=17:10203421-10203785;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1451.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:69:1/1:0:26:0:33:1/1:0:17:0:22:1/1:0:39:0/1:3:15:.:.:.
chr17	12196579	HG2_10X_SVrefine210Xhap12_11491	TAAACATACTTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAACAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCGGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAACAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_16973:HG4_Ill_Krunchall_22570:HG3_Ill_Krunchall_21809:HG2_Ill_Krunchall_22234:HG4_PB_assemblyticsfalcon_10286:HG2_PB_assemblyticsfalcon_10487:HG2_PB_assemblyticsPBcR_10095:HG3_Ill_Krunchall_21808:HG2_PB_pbsv_16612:HG2_Ill_Krunchall_22233:HG4_Ill_Spiral_1291:HG3_PB_HySA_25049:HG2_PB_HySA_30242:HG2_Ill_Spiral_1086:HG4_PB_pbsv_16534:HG4_PB_HySA_24188:HG4_Ill_MetaSV_1984:HG3_Ill_MetaSV_2054:HG2_Ill_tnscope_1762:HG2_Ill_MetaSV_1915:HG4_PB_SVrefine2PBcRDovetail_8290:HG4_PB_SVrefine2Falcon1Dovetail_10279:HG4_Ill_svaba_20486:HG4_Ill_scalpel_15139:HG4_Ill_manta_3799:HG4_Ill_SVrefine2DISCOVARDovetail_11603:HG4_Ill_GATKHCSBGrefine_11263:HG4_10X_allpass_2996:HG3_PB_pbsv_16261:HG3_PB_assemblyticsfalcon_10477:HG3_PB_SVrefine2PBcRDovetail_8017:HG3_PB_SVrefine2Falcon1Dovetail_10270:HG3_Ill_svaba_20681:HG3_Ill_scalpel_15788:HG3_Ill_manta_3647:HG3_Ill_SVrefine2DISCOVARDovetail_11820:HG3_Ill_GATKHCSBGrefine_10826:HG3_10X_allpass_3157:HG2_PB_SVrefine2PBcRplusDovetail_4301:HG2_PB_SVrefine2PB10Xhap12_12035:HG2_PB_SVrefine2Falcon2Bionano_8194:HG2_PB_SVrefine2Falcon1plusDovetail_4695:HG2_Ill_svaba_20510:HG2_Ill_scalpel_15492:HG2_Ill_manta_4467:HG2_Ill_breakscan11_2382:HG2_Ill_SVrefine2DISCOVARplusDovetail_5039:HG2_Ill_GATKHCSBGrefine_10903:HG2_10X_allpass_2558:HG2_10X_SVrefine210Xhap12_11491;NumClusterSVs=50;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11491:HG2_10X_allpass_2558:HG2_Ill_GATKHCSBGrefine_10903:HG2_Ill_SVrefine2DISCOVARplusDovetail_5039:HG2_Ill_breakscan11_2382:HG2_Ill_manta_4467:HG2_Ill_scalpel_15492:HG2_Ill_svaba_20510:HG2_PB_SVrefine2Falcon1plusDovetail_4695:HG2_PB_SVrefine2Falcon2Bionano_8194:HG2_PB_SVrefine2PB10Xhap12_12035:HG2_PB_SVrefine2PBcRplusDovetail_4301:HG3_10X_allpass_3157:HG3_Ill_GATKHCSBGrefine_10826:HG3_Ill_SVrefine2DISCOVARDovetail_11820:HG3_Ill_manta_3647:HG3_Ill_scalpel_15788:HG3_Ill_svaba_20681:HG3_PB_SVrefine2Falcon1Dovetail_10270:HG3_PB_SVrefine2PBcRDovetail_8017:HG3_PB_assemblyticsfalcon_10477:HG3_PB_pbsv_16261:HG4_10X_allpass_2996:HG4_Ill_GATKHCSBGrefine_11263:HG4_Ill_SVrefine2DISCOVARDovetail_11603:HG4_Ill_manta_3799:HG4_Ill_scalpel_15139:HG4_Ill_svaba_20486:HG4_PB_SVrefine2Falcon1Dovetail_10279:HG4_PB_SVrefine2PBcRDovetail_8290;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0930979;ClusterMaxSizeDiff=0.0930979;ClusterMaxEditDist=0.0930979;PBcalls=18;Illcalls=28;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=21;HG3count=15;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-674;DistForward=-303;DistMin=-674;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=17:12196580-12196911;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1452.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:56:1/1:0:30:0:15:1/1:0:22:0:20:1/1:0:41:0/1:2:13:.:.:.
chr17	12345625	HG4_Ill_SVrefine2DISCOVARDovetail_11604	TTATATATTATATAATAATATATATTATATATTATATAATGATATATATTATATATTATATAATGATATATATTATATATTATATAATGATATATATTATATATTATATAATGATATATAATATATATTATATAATGATATATATTATATATTATATAATAATATATATTATTATATAATATATATTATATATTATATAATATATATTATATATTATATAATAATATATATTATATATCATATAATATATAATATATTATATATCATATAATATATATTATATATCATATAATATATATTATATATCATATAATATATATATCATATAATAATATATATCATATAATAATATATATTATACATCATATAATAATATATATCATATAATAATATATATTATACATCATATAATAATATATATCATATAATAATATATATTATACATCATATAATAATATATATCATATAATAATATATATTATACATCATATAATATATATCATATAATAATATATATTATACATCATATAATATATATCATATAATAATATATATTATACATCATATAATATATATCATATAATGTATATTATACATCATATAATATATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATAATGTATATTATACATCATGTATATCATATAATAATGTATATTATACATCATGTATATCATATAATAATGTATATTATACATCATGTATATCATATAATAATGTATATTATACATCATGTATATCATATAATAATGTATATTATACATCATGTATATCATATAATAATGTATATTATACATCATGTATATCATATAATAATGTATATTATACATCATGTATATCATATAATAATGTATATTATACATCATGTATATCATATAATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATATAATGTATATTATACATCATGTATATCATAATAATGTATATTATACATCATGTATATCATATATCATATAATGTATATTATACATCATGTATATCATATATCATATAATGTATATTATACATCATG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_16536:HG2_PB_pbsv_16616:HG2_PB_assemblyticsfalcon_10491:HG2_PB_SVrefine2PBcRplusDovetail_4304:HG2_PB_assemblyticsPBcR_10097:HG4_PB_assemblyticsfalcon_10289:HG2_PB_SVrefine2Falcon1plusDovetail_4697:HG4_Ill_GATKHCSBGrefine_11264:HG2_Ill_GATKHCSBGrefine_10905:HG4_10X_allpass_2997:HG4_Ill_MetaSV_1985:HG2_Ill_MetaSV_1916:HG4_Ill_Krunchall_22574:HG2_Ill_Krunchall_22237:HG2_PB_HySA_30248:HG2_Ill_Krunchall_22236:HG2_Ill_tnscope_1763:HG4_PB_SVrefine2PBcRDovetail_8292:HG4_PB_SVrefine2Falcon1Dovetail_10281:HG4_Ill_SVrefine2DISCOVARDovetail_11604:HG2_PB_SVrefine2PBcRplusDovetail_4303:HG2_PB_SVrefine2PB10Xhap12_12038:HG2_Ill_SVrefine2DISCOVARplusDovetail_5040:HG2_10X_SVrefine210Xhap12_11494;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11494:HG2_Ill_SVrefine2DISCOVARplusDovetail_5040:HG2_PB_SVrefine2PB10Xhap12_12038:HG2_PB_SVrefine2PBcRplusDovetail_4303:HG4_Ill_SVrefine2DISCOVARDovetail_11604:HG4_PB_SVrefine2Falcon1Dovetail_10281:HG4_PB_SVrefine2PBcRDovetail_8292;NumExactMatchSVs=7;ClusterMaxShiftDist=0.18547;ClusterMaxSizeDiff=0.18547;ClusterMaxEditDist=0.18547;PBcalls=12;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1547;DistBack=-1563;DistForward=-1538;DistMin=-1563;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=133;REFWIDENED=17:12345626-12347305;PctSeqSimilarity=0.9503;PctSizeSimilarity=0.9994;PctRecOverlap=0.9742;SizeDiff=-1;StartDistance=-39;EndDistance=-40;GTMatch=0;TruScore=97;MatchId=1453.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:24:0|1:38:1:3:16:./.:21:0:3:8:0/1:32:9:0/1:106:35:7752:.:.
chr17	12353133	HG4_Ill_SVrefine2DISCOVARDovetail_11605	TTAACATTTCTTCTTTTTTTTTTTTTTTTTTTTTTTCACTGTGTTAACCAGGATGGTCTTGATCTCCTGATCTTTTTTTTTTTTTTAATTTTTATTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACACACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCCACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATCTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTCAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCGTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAGTCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGGTATGCGGCGTTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTATAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGCACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTTTTGAATTTTGTCAAAAGCTTTTTCTGCATGTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGTATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTGTTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGATCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTTTTGGGAGAGTGTATGTGTCGAGGAATGTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCATAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCAGTCTATCAATTTTGTTGATCCTTTCAAAAAACCAACTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACAGTGCTTTGAATGTGTCCCAGAGATTCTGGTATGTTGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCCGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAGTATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCGCCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTATGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGGAGAATTTAGTCCATTTACATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTATTTTGCTCGTTAGTTGATGCAGTTTCTTCCTAGTCTCGATTGTCTTTACATTTTGGCATGATTTTGCAGCAGCTGGTACCGGTTGTTCCTTTCCATGTTTGGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCTGCTGTTAGTCTGATGGGCTTCTCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGGTTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCGCATCACTTTCAGGTACACCAATCAGACGTAAATTTGGTCTTTTCACGTAGTCCCATATATCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATCGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTTTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGGAGCTGTGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTACAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTGGATGTCCTTTCTGTTTGTTATTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCATGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACATTTAGGTCTGCAGAGGTTACTGCTATCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCTGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGGGGGCGCCCCTCCCCCAGCCTCGCTGCTGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTTTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCGCACCCACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGTGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCGATCC	T	20	PASS	ClusterIDs=HG4_Ill_MetaSV_1986:HG4_Ill_Krunchall_22576:HG2_Ill_Krunchall_22239:HG4_10X_allpass_2998:HG2_10X_allpass_2559:HG2_PB_assemblyticsfalcon_10494:HG2_PB_assemblyticsPBcR_10099:HG4_Ill_Krunchall_22575:HG2_Ill_Krunchall_22238:HG3_PB_assemblyticsfalcon_10482:HG3_PB_SVrefine2Falcon1Dovetail_10273:HG2_Ill_MetaSV_1917:HG4_PB_pbsv_16537:HG4_PB_SVrefine2PBcRDovetail_8293:HG4_PB_SVrefine2Falcon1Dovetail_10282:HG4_Ill_SVrefine2DISCOVARDovetail_11605:HG2_PB_pbsv_16617:HG2_PB_SVrefine2PBcRplusDovetail_4305:HG2_PB_SVrefine2PB10Xhap12_12039:HG2_Ill_breakscan11_2383:HG2_Ill_SVrefine2DISCOVARplusDovetail_5041:HG2_10X_SVrefine210Xhap12_11495:HG2_Ill_tnscope_1764;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11495:HG2_Ill_SVrefine2DISCOVARplusDovetail_5041:HG2_Ill_breakscan11_2383:HG2_PB_SVrefine2PB10Xhap12_12039:HG2_PB_SVrefine2PBcRplusDovetail_4305:HG2_PB_pbsv_16617:HG4_Ill_SVrefine2DISCOVARDovetail_11605:HG4_PB_SVrefine2Falcon1Dovetail_10282:HG4_PB_SVrefine2PBcRDovetail_8293:HG4_PB_pbsv_16537;NumExactMatchSVs=10;ClusterMaxShiftDist=0.029528;ClusterMaxSizeDiff=0.029528;ClusterMaxEditDist=0.029528;PBcalls=10;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6121;DistBack=6019;DistForward=-6121;DistMin=-6121;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=17:12353134-12359267;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1454.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:61:60:0|1:56:0:0:29:0|1:51:0:0:43:0/1:29:10:0/1:367:188:7752:.:.
chr17	12922942	HG4_Ill_150bpfermikitraw_20794	TCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGAGAATAGCTTCAGGCTAGTAGTTCAAAACCTGCTCTGTGGCCAGGCATGGTGGCTTATGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11497:HG3_PB_HySA_25065:HG4_PB_HySA_24196:HG3_PB_pbsv_16264:HG4_Ill_Spiral_1292:HG2_Ill_Spiral_1087:HG4_PB_pbsv_16538:HG2_PB_pbsv_16619:HG4_PB_SVrefine2PBcRDovetail_8294:HG4_Ill_svaba_20491:HG4_Ill_scalpel_15145:HG4_Ill_SVrefine2DISCOVARDovetail_11609:HG4_Ill_Krunchall_22582:HG4_Ill_GATKHC_26260:HG4_Ill_GATKHCSBGrefine_11265:HG4_Ill_250bpfermikitraw_21595:HG4_Ill_150bpfermikitraw_20794:HG4_10X_allpass_2999:HG3_PB_SVrefine2PBcRDovetail_8018:HG3_Ill_svaba_20693:HG3_Ill_scalpel_15796:HG3_Ill_manta_3649:HG3_Ill_SVrefine2DISCOVARDovetail_11824:HG3_Ill_Krunchall_21819:HG3_Ill_GATKHC_26127:HG3_Ill_GATKHCSBGrefine_10827:HG3_Ill_250bpfermikitraw_21292:HG3_Ill_150bpfermikitraw_20716:HG3_10X_allpass_3158:HG2_Ill_svaba_20521:HG2_Ill_scalpel_15497:HG2_Ill_SVrefine2DISCOVARplusDovetail_5045:HG2_Ill_Krunchall_22245:HG2_Ill_GATKHC_26303:HG2_Ill_GATKHCSBGrefine_10906:HG2_Ill_250bpfermikitraw_21936:HG2_10X_allpass_2560;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11497:HG4_PB_SVrefine2PBcRDovetail_8294:HG4_Ill_svaba_20491:HG4_Ill_scalpel_15145:HG4_Ill_SVrefine2DISCOVARDovetail_11609:HG4_Ill_Krunchall_22582:HG4_Ill_GATKHC_26260:HG4_Ill_GATKHCSBGrefine_11265:HG4_Ill_250bpfermikitraw_21595:HG4_Ill_150bpfermikitraw_20794:HG4_10X_allpass_2999:HG3_PB_SVrefine2PBcRDovetail_8018:HG3_Ill_svaba_20693:HG3_Ill_scalpel_15796:HG3_Ill_manta_3649:HG3_Ill_SVrefine2DISCOVARDovetail_11824:HG3_Ill_Krunchall_21819:HG3_Ill_GATKHC_26127:HG3_Ill_GATKHCSBGrefine_10827:HG3_Ill_250bpfermikitraw_21292:HG3_Ill_150bpfermikitraw_20716:HG3_10X_allpass_3158:HG2_Ill_svaba_20521:HG2_Ill_scalpel_15497:HG2_Ill_SVrefine2DISCOVARplusDovetail_5045:HG2_Ill_Krunchall_22245:HG2_Ill_GATKHC_26303:HG2_Ill_GATKHCSBGrefine_10906:HG2_Ill_250bpfermikitraw_21936:HG2_10X_allpass_2560;NumExactMatchSVs=30;ClusterMaxShiftDist=0.110553;ClusterMaxSizeDiff=0.110553;ClusterMaxEditDist=0.120603;PBcalls=7;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=24;TenXexactcalls=4;CGexactcalls=0;HG2count=11;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-94;DistBack=32951;DistForward=2896;DistMin=2896;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=17:12922943-12923067;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1455.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:15:0|1:19:3:0:11:0|1:17:1:0:12:0/1:28:17:./.:.:.:.:.:.
chr17	12973782	HG2_Ill_GATKHCSBGrefine_10908	GGAGAGAGAGAGAGAGAGAGAGAAAGAAAGGGGGGGGAGAGAGAGAGAGGGGTAGGGGGAAAGGGAGAGAGA	G	20	PASS	ClusterIDs=HG2_PB_HySA_30264:HG4_Ill_manta_3800:HG2_Ill_manta_4468:HG2_PB_assemblyticsfalcon_10502:HG3_Ill_manta_3650:HG2_PB_pbsv_16620:HG3_PB_assemblyticsfalcon_10490:HG3_Ill_scalpel_15797:HG3_Ill_Krunchall_21821:HG3_Ill_GATKHC_26129:HG3_Ill_GATKHCSBGrefine_10829:HG3_Ill_150bpfermikitraw_20718:HG2_Ill_GATKHC_26306:HG2_Ill_GATKHCSBGrefine_10908:HG2_Ill_250bpfermikitraw_21939:HG2_Ill_150bpfermikitraw_20665:HG2_PB_assemblyticsPBcR_10105:HG4_Ill_scalpel_15146:HG4_Ill_Krunchall_22583:HG4_Ill_GATKHC_26262:HG4_Ill_GATKHCSBGrefine_11267:HG4_Ill_250bpfermikitraw_21597:HG4_Ill_150bpfermikitraw_20795:HG4_10X_allpass_3000:HG2_Ill_Krunchall_22248:HG3_PB_pbsv_16266:HG4_PB_pbsv_16539;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20665:HG2_Ill_250bpfermikitraw_21939:HG2_Ill_GATKHCSBGrefine_10908:HG2_Ill_GATKHC_26306:HG3_Ill_150bpfermikitraw_20718:HG3_Ill_GATKHCSBGrefine_10829:HG3_Ill_GATKHC_26129:HG3_Ill_Krunchall_21821:HG3_Ill_scalpel_15797:HG3_PB_assemblyticsfalcon_10490;NumExactMatchSVs=10;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.158273;PBcalls=7;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-71;DistBack=4;DistForward=11823;DistMin=4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=72;REFWIDENED=17:12973727-12973869;PctSeqSimilarity=0.9714;PctSizeSimilarity=0.9437;PctRecOverlap=0.9444;SizeDiff=4;StartDistance=0;EndDistance=4;GTMatch=0;TruScore=95;MatchId=1456.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:68:1/1:1:23:0:23:./.:0:13:2:18:0/1:2:14:./.:.:.:.:.:.
chr17	13220477	HG2_10X_SVrefine210Xhap12_11500	AAAGGGTAAAGACAGAATCTTTTTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1919:HG2_10X_allpass_2561:HG2_PB_assemblyticsfalcon_10505:HG4_PB_assemblyticsfalcon_10300:HG3_PB_assemblyticsfalcon_10493:HG2_PB_assemblyticsPBcR_10108:HG4_Ill_Krunchall_22586:HG3_Ill_Krunchall_21827:HG3_PB_HySA_25074:HG2_PB_HySA_30268:HG2_PB_pbsv_16623:HG3_PB_pbsv_16270:HG4_PB_pbsv_16542:HG4_PB_SVrefine2PBcRDovetail_8296:HG4_PB_SVrefine2Falcon1Dovetail_10285:HG4_Ill_svaba_20495:HG4_Ill_scalpel_15147:HG4_Ill_manta_3801:HG4_Ill_SVrefine2DISCOVARDovetail_11611:HG4_Ill_GATKHCSBGrefine_11269:HG4_10X_allpass_3001:HG3_PB_SVrefine2PBcRDovetail_8020:HG3_PB_SVrefine2Falcon1Dovetail_10276:HG3_Ill_svaba_20699:HG3_Ill_scalpel_15802:HG3_Ill_manta_3652:HG3_Ill_SVrefine2DISCOVARDovetail_11828:HG3_Ill_GATKHCSBGrefine_10831:HG3_10X_allpass_3161:HG2_PB_SVrefine2PBcRplusDovetail_4307:HG2_PB_SVrefine2PB10Xhap12_12044:HG2_PB_SVrefine2Falcon2Bionano_8199:HG2_PB_SVrefine2Falcon1plusDovetail_4699:HG2_Ill_svaba_20525:HG2_Ill_scalpel_15501:HG2_Ill_manta_4470:HG2_Ill_SVrefine2DISCOVARplusDovetail_5047:HG2_Ill_GATKHCSBGrefine_10912:HG2_10X_SVrefine210Xhap12_11500:HG2_Ill_breakscan11_2384:HG4_PB_HySA_24199:HG4_Ill_MetaSV_1987:HG3_Ill_MetaSV_2055:HG2_Ill_tnscope_1765;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11500:HG2_Ill_GATKHCSBGrefine_10912:HG2_Ill_SVrefine2DISCOVARplusDovetail_5047:HG2_Ill_manta_4470:HG2_Ill_scalpel_15501:HG2_Ill_svaba_20525:HG2_PB_SVrefine2Falcon1plusDovetail_4699:HG2_PB_SVrefine2Falcon2Bionano_8199:HG2_PB_SVrefine2PB10Xhap12_12044:HG2_PB_SVrefine2PBcRplusDovetail_4307:HG3_10X_allpass_3161:HG3_Ill_GATKHCSBGrefine_10831:HG3_Ill_SVrefine2DISCOVARDovetail_11828:HG3_Ill_manta_3652:HG3_Ill_scalpel_15802:HG3_Ill_svaba_20699:HG3_PB_SVrefine2Falcon1Dovetail_10276:HG3_PB_SVrefine2PBcRDovetail_8020:HG4_10X_allpass_3001:HG4_Ill_GATKHCSBGrefine_11269:HG4_Ill_SVrefine2DISCOVARDovetail_11611:HG4_Ill_manta_3801:HG4_Ill_scalpel_15147:HG4_Ill_svaba_20495:HG4_PB_SVrefine2Falcon1Dovetail_10285:HG4_PB_SVrefine2PBcRDovetail_8296;NumExactMatchSVs=26;ClusterMaxShiftDist=0.128931;ClusterMaxSizeDiff=0.128931;ClusterMaxEditDist=0.128931;PBcalls=18;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=23423;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=17:13220478-13220825;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1457.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:73:1/1:0:34:1:29:1/1:0:33:0:35:1/1:0:41:./.:1:15:.:.:.
chr17	14189910	HG4_PB_SVrefine2Falcon1Dovetail_10290	TAGTTAGAACGTAGTTTCTTCTTGAAATGTAGGGTACATGAATTAACCCTTGCCTGGCATGGCCTTCTGTCCTGTTTATAATTTGGTGGTGGTTGTTGTTTTTGAGACAGGGTCTCACTACAGTTGCCCAGGCTGTAGTACAGTGGCACGATCTTGGCTCACTGCACCCTTGAAGTGAGCCTCAACCTCCTGAGTTCAGGTGATCCTCCCATCTAAGCCTCCCAAGTGTTGGGACTACAGGCATGTGCCATCATGCCTGACTTATTTTTTGTATTTGTAGTAGAGACAAGGTTTTTTCTACGTTGCCCAGGCTGGTCTCGAACTCCTGGACTCAAGCAATCTGCCTGTCTTGGCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCTGGCCTATACTTTGGTATCTAATTGCCACAAAGAGTTCATTATGTCAGTCTTATAATCTCTATTTTAACATTAATATTGGCTGGTTGTGATGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGGGGATTGCTTGAGTCCAGGAGTTCAAGACAAGCCTGGGCAAAATGGCAAAACCTCGTCTCTATGAAAAATACATAAATTAGCCAGGCATGGCGGTGCATGCTGTAAGTCCCAGCTATTTGGGAGGCTGAGGTGGGAGGACTGCTTGAGCCTAGGAGGTCCAGGCTGCAGTGAGCTGTGATGGTGCCACTTCACTCCAGCCTGGGTGACAGAGTGAGACTCTGTCTCAAAAAATAATAATAAAATAAAAACATTACTGCTGATCAGTTGTGTCTAAACCACAGAGGGGAGGGGGGCATAATGAGGCATGTCTGACTTCCCATCCCATCATGACTGGGAACTCAGTTTTCAGTTTTTTCTGTGGTACCCTTGGCCAACAGGGAGTTATTTCAGTTGGTGAGGGGGTGGTTAGGATTTTATTTTTAATTTACAGATGGAGAAAAAAAAAACACAGAAGATTGTGAGGTATCAGGAGCCAAAAGAGGTGACTATCAAGGAGGACACAAAGGTCAACAGTATCTAATGCTGCTGAGAGCCTATGCAAGATAAGGACAGAAAAGTGTGCACTGGCTCCTGGGGGAATCAGGGGACTCTGGGAAGATGGCATCATCCCAAATGCGTGCAGCCTCCTCTTCCCTCCCAAACTCAACACCAAACTCCTTCCAAGAGACAAGAAGCAGCCACAAGCAAGTGTCTGAATTTTGCTACTACAGACTCATGGACAGTTGGGAGAGAAAAATGCTCTCCATTCACATGAGGGTTCCTGGGCTTCCTGGCTCCAGAAAGTGTAAAGAGGTGGCCCAAGTCATCTCTGTCCATGCCGATGGGAGTTCAAAGACATGGAGTCTTCCTTGTATGTTTCTGTAGGGGTTTGGCAACCTTGCCTTGCTGGCTGTAGGCTCTTGGGGACAGGCTGCTGACCCTGTCACCACTCAAGGTGGCACCATTTATTGTCCTACAGCAGCAAGAAAGTAGCCCCATTGAAAGGACATGGGGAAGAGAGTAATACACCAAGGGGACCCAGCAGGTGGAGAGAGAAGGAGCAAGCAGAACCCTCACAAGAGATCCTTAAAAAATAAAACTCTTGGGGAAGACAAGACAAAGGAGCACAGTTTAGGAC	T	20	PASS	ClusterIDs=HG4_Ill_Krunchall_22596:HG4_PB_assemblyticsfalcon_10312:HG3_PB_assemblyticsfalcon_10503:HG4_PB_pbsv_16549:HG4_Ill_Krunchall_22597:HG3_Ill_Krunchall_21838:HG2_Ill_Krunchall_22261:HG2_PB_assemblyticsPBcR_10119:HG2_PB_assemblyticsfalcon_10517:HG3_PB_HySA_25088:HG2_10X_allpass_2562:HG2_Ill_tnscope_1766:HG4_PB_SVrefine2PBcRDovetail_8299:HG4_PB_SVrefine2Falcon1Dovetail_10290:HG4_Ill_MetaSV_1990:HG4_10X_allpass_3003:HG3_PB_pbsv_16276:HG3_PB_SVrefine2PBcRDovetail_8022:HG3_PB_SVrefine2Falcon1Dovetail_10281:HG3_Ill_MetaSV_2059:HG3_Ill_GATKHCSBGrefine_10839:HG3_10X_allpass_3164:HG2_PB_pbsv_16626:HG2_PB_SVrefine2PBcRplusDovetail_4310:HG2_PB_SVrefine2PB10Xhap12_12048:HG2_PB_SVrefine2Falcon2Bionano_8202:HG2_Ill_SpiralSDKrefine_6624:HG2_Ill_SVrefine2DISCOVARplusDovetail_5051:HG2_Ill_MetaSV_1920:HG2_Ill_GATKHCSBGrefine_10914:HG2_10X_SVrefine210Xhap12_11503:HG2_Ill_breakscan11_2385;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11503:HG2_Ill_GATKHCSBGrefine_10914:HG2_Ill_MetaSV_1920:HG2_Ill_SVrefine2DISCOVARplusDovetail_5051:HG2_Ill_SpiralSDKrefine_6624:HG2_PB_SVrefine2Falcon2Bionano_8202:HG2_PB_SVrefine2PB10Xhap12_12048:HG2_PB_SVrefine2PBcRplusDovetail_4310:HG2_PB_pbsv_16626:HG3_10X_allpass_3164:HG3_Ill_GATKHCSBGrefine_10839:HG3_Ill_MetaSV_2059:HG3_PB_SVrefine2Falcon1Dovetail_10281:HG3_PB_SVrefine2PBcRDovetail_8022:HG3_PB_pbsv_16276:HG4_10X_allpass_3003:HG4_Ill_MetaSV_1990:HG4_PB_SVrefine2Falcon1Dovetail_10290:HG4_PB_SVrefine2PBcRDovetail_8299;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00608643;ClusterMaxSizeDiff=0.00547612;ClusterMaxEditDist=0.0182648;PBcalls=15;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1645;DistBack=41230;DistForward=-1645;DistMin=-1645;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=17:14189911-14191556;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1458.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:0:6:0:6:1/1:0:9:0:25:1/1:0:28:1/1:3:104:1638:.:.
chr17	14445417	HG2_Ill_GATKHCSBGrefine_10915	CTCCCCTTTTCCCATTTCCCTTCCCTTCCCTCCCCTACTCTCCCCTCCCCCTCCCTTCCCTTCCT	C	20	PASS	ClusterIDs=HG3_PB_HySA_25090:HG4_PB_pbsv_16550:HG3_PB_pbsv_16279:HG2_PB_pbsv_16628:HG4_Ill_scalpel_15160:HG4_Ill_GATKHC_26290:HG4_Ill_GATKHCSBGrefine_11275:HG4_10X_allpass_3004:HG3_Ill_GATKHC_26158:HG3_Ill_GATKHCSBGrefine_10841:HG3_Ill_250bpfermikitraw_21313:HG2_Ill_GATKHC_26328:HG2_Ill_GATKHCSBGrefine_10915;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10915:HG2_Ill_GATKHC_26328:HG3_Ill_250bpfermikitraw_21313:HG3_Ill_GATKHCSBGrefine_10841:HG3_Ill_GATKHC_26158:HG4_10X_allpass_3004:HG4_Ill_GATKHCSBGrefine_11275:HG4_Ill_GATKHC_26290:HG4_Ill_scalpel_15160;NumExactMatchSVs=9;ClusterMaxShiftDist=0.015625;ClusterMaxSizeDiff=0.0155039;ClusterMaxEditDist=0.0930233;PBcalls=4;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-64;DistBack=-65;DistForward=3765;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=198;REFWIDENED=17:14445288-14445549;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1459.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:33:./.:3:14:12:14:./.:3:17:1:11:./.:0:3:./.:.:.:.:.:.
chr17	17210787	HG2_10X_SVrefine210Xhap12_11514	CTCACGCCTGTAATCCTAGCACTTTGGGAGGCTGAGGCAGGTGGATTGCCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGATGAAACCCTGCCTCAGCCAGGTACGGTGGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11514:HG4_PB_assemblyticsfalcon_10330:HG3_PB_assemblyticsfalcon_10520:HG2_PB_assemblyticsfalcon_10532:HG2_PB_SVrefine2Falcon1plusDovetail_4706:HG2_PB_assemblyticsPBcR_10136:HG4_PB_HySA_24246:HG4_PB_pbsv_16559:HG2_PB_pbsv_16636:HG3_PB_pbsv_16288:HG4_Ill_MetaSV_1994:HG4_Ill_MetaSV_1993:HG3_Ill_MetaSV_2064:HG4_PB_SVrefine2PBcRDovetail_8308:HG4_PB_SVrefine2Falcon1Dovetail_10294:HG4_Ill_scalpel_15170:HG4_Ill_GATKHCSBGrefine_11281:HG4_Ill_250bpfermikitraw_21624:HG4_Ill_150bpfermikitraw_20824:HG3_Ill_scalpel_15827:HG3_Ill_GATKHCSBGrefine_10853:HG3_10X_allpass_3166:HG2_PB_SVrefine2PBcRplusDovetail_4317:HG2_PB_SVrefine2PB10Xhap12_12056:HG2_Ill_scalpel_15522:HG2_Ill_SVrefine2DISCOVARplusDovetail_5070:HG2_Ill_GATKHCSBGrefine_10921;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11514:HG4_PB_SVrefine2PBcRDovetail_8308:HG4_PB_SVrefine2Falcon1Dovetail_10294:HG4_Ill_scalpel_15170:HG4_Ill_GATKHCSBGrefine_11281:HG4_Ill_250bpfermikitraw_21624:HG4_Ill_150bpfermikitraw_20824:HG3_Ill_scalpel_15827:HG3_Ill_GATKHCSBGrefine_10853:HG3_10X_allpass_3166:HG2_PB_SVrefine2PBcRplusDovetail_4317:HG2_PB_SVrefine2PB10Xhap12_12056:HG2_Ill_scalpel_15522:HG2_Ill_SVrefine2DISCOVARplusDovetail_5070:HG2_Ill_GATKHCSBGrefine_10921;NumExactMatchSVs=15;ClusterMaxShiftDist=0.034188;ClusterMaxSizeDiff=0.034188;ClusterMaxEditDist=0.0948276;PBcalls=13;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-116;DistBack=15483;DistForward=-72;DistMin=-72;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=225;REFWIDENED=17:17210657-17210997;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1460.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:29:0|1:20:4:1:22:1|0:0:8:34:1:0/1:26:18:./.:.:.:.:.:.
chr17	17230374	HG2_Ill_manta_4474	CGCCACCACACCCGGCTAATTTTTTTTTGTATTTTTAGTAGAAACAGGGTTTCATCATGTTGGCCAGGCTGGTCTCTAGCTCCTGACCTCGTGATCCACCCATCTTGTCCTCCCAGAGTGCTAGGATTACAGGTGAGCCACCACACCCAGCCCTCGTTTTTCTTTGATGCGTATTAAATATAATACATGTATTTTAACAAAGCTTTCATCCAACATAGTTATCCTTTTCTGCTTATTAATATATTTTTAGCCTTTTTTCTGTCATCAAACACTTCAGAAACATGATTTTTTTTTTTTTTTGTGAGACAGGGTCCAGCTCTGTGGCCCAGACTGAAGTGCAGTGACACGATCTTGGCTCACTGCAACCTCTGCCTCCTGAGTTTAAGTGATTCTCATGCCTCAGCCTCCCAAGCAGCTGGGACAAGTGTGTGTCACCATGCCTGGCTAATTTTTTATATTTTTGTTCTGTTTTGTTTGAGACAGAGTCCTGCTCTGTCACCCAAGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTTCAACCTCCACCTCCTGGGTTCAAGTGATTATCCTGCCCCAGCCTCCTAAGTAGCTGGGATTACAGGTGCGTGCCACCATGACCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCGCTATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTTGTGATCCACCTGCCTCGGTCTCCCAAATGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCCAATTTTTTTGTATTTTTAATAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTAGCCTCAAAGTAGTCTGCCCATCTCGGTCTCCCGAAGTGCTGGGATTACAGGTGTGA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_16560:HG2_10X_allpass_2564:HG2_PB_assemblyticsPBcR_10137:HG4_PB_assemblyticsfalcon_10331:HG3_PB_assemblyticsfalcon_10521:HG2_Ill_MetaSV_1923:HG4_Ill_svaba_20521:HG4_Ill_manta_3805:HG4_Ill_MetaSV_1995:HG4_Ill_GATKHCSBGrefine_11282:HG4_10X_allpass_3006:HG3_Ill_svaba_20724:HG3_Ill_GATKHCSBGrefine_10854:HG2_PB_pbsv_16637:HG2_Ill_svaba_20547:HG2_Ill_manta_4474:HG2_Ill_breakscan11_2387:HG2_Ill_GATKHCSBGrefine_10922:HG3_PB_pbsv_16289:HG3_Ill_MetaSV_2065:HG4_PB_SVrefine2Falcon1Dovetail_10295:HG3_PB_SVrefine2PBcRDovetail_8030:HG3_Ill_SVrefine2DISCOVARDovetail_11838:HG2_PB_SVrefine2PBcRplusDovetail_4318:HG2_PB_SVrefine2PB10Xhap12_12057:HG2_PB_SVrefine2Falcon1plusDovetail_4707:HG2_10X_SVrefine210Xhap12_11515:HG2_Ill_tnscope_1768;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10922:HG2_Ill_breakscan11_2387:HG2_Ill_manta_4474:HG2_Ill_svaba_20547:HG2_PB_pbsv_16637:HG3_Ill_GATKHCSBGrefine_10854:HG3_Ill_svaba_20724:HG4_10X_allpass_3006:HG4_Ill_GATKHCSBGrefine_11282:HG4_Ill_MetaSV_1995:HG4_Ill_manta_3805:HG4_Ill_svaba_20521;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0632547;ClusterMaxSizeDiff=0.0632547;ClusterMaxEditDist=0.0632547;PBcalls=11;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-876;DistBack=-593;DistForward=-273;DistMin=-593;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8386;REFWIDENED=17:17220667-17239619;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1461.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:39:./.:20:3:9:23:1|0:0:24:54:0:0/1:45:11:0/1:69:27:.:.:0.984211
chr17	18182766	HG2_Ill_SpiralSDKrefine_6649	TTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACCACGCCTGGCCATTTTTTGTATTTTTAGTAGAGACAGTGTC	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_10529:HG4_Ill_Krunchall_22624:HG3_Ill_Krunchall_21861:HG4_PB_HySA_24253:HG2_PB_HySA_30317:HG4_PB_pbsv_16567:HG2_PB_pbsv_16646:HG3_PB_pbsv_16296:HG4_PB_SVrefine2PBcRDovetail_8312:HG4_PB_SVrefine2Falcon1Dovetail_10300:HG4_Ill_svaba_20527:HG4_Ill_GATKHC_26314:HG4_Ill_GATKHCSBGrefine_11285:HG4_10X_allpass_3007:HG3_PB_SVrefine2PBcRDovetail_8034:HG3_Ill_svaba_20730:HG3_Ill_SVrefine2DISCOVARDovetail_11841:HG3_Ill_GATKHC_26182:HG3_Ill_GATKHCSBGrefine_10858:HG3_10X_allpass_3167:HG2_PB_assemblyticsfalcon_10543:HG2_PB_assemblyticsPBcR_10148:HG2_PB_SVrefine2PBcRplusDovetail_4324:HG2_PB_SVrefine2PB10Xhap12_12063:HG2_PB_SVrefine2Falcon2Bionano_8210:HG2_PB_SVrefine2Falcon1plusDovetail_4713:HG2_Ill_svaba_20552:HG2_Ill_scalpel_15528:HG2_Ill_SpiralSDKrefine_6649:HG2_Ill_SVrefine2DISCOVARplusDovetail_5075:HG2_Ill_GATKHC_26352:HG2_Ill_GATKHCSBGrefine_10924:HG2_Ill_250bpfermikitraw_21972:HG4_PB_assemblyticsfalcon_10338;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_250bpfermikitraw_21972:HG2_Ill_GATKHCSBGrefine_10924:HG2_Ill_GATKHC_26352:HG2_Ill_SVrefine2DISCOVARplusDovetail_5075:HG2_Ill_SpiralSDKrefine_6649:HG2_Ill_scalpel_15528:HG2_Ill_svaba_20552:HG2_PB_SVrefine2Falcon1plusDovetail_4713:HG2_PB_SVrefine2Falcon2Bionano_8210:HG2_PB_SVrefine2PB10Xhap12_12063:HG2_PB_SVrefine2PBcRplusDovetail_4324:HG2_PB_assemblyticsPBcR_10148:HG2_PB_assemblyticsfalcon_10543:HG3_10X_allpass_3167:HG3_Ill_GATKHCSBGrefine_10858:HG3_Ill_GATKHC_26182:HG3_Ill_SVrefine2DISCOVARDovetail_11841:HG3_Ill_svaba_20730:HG3_PB_SVrefine2PBcRDovetail_8034:HG4_10X_allpass_3007:HG4_Ill_GATKHCSBGrefine_11285:HG4_Ill_GATKHC_26314:HG4_Ill_svaba_20527:HG4_PB_SVrefine2Falcon1Dovetail_10300:HG4_PB_SVrefine2PBcRDovetail_8312;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0300752;ClusterMaxSizeDiff=0.0300752;ClusterMaxEditDist=0.0380228;PBcalls=16;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-133;DistBack=11622;DistForward=17852;DistMin=11622;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=135;REFWIDENED=17:18182726-18182993;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1462.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:65:1/1:2:22:0:22:./.:0:18:1:7:1/1:0:48:./.:.:.:.:.:.
chr17	18791138	HG3_Ill_SVrefine2DISCOVARDovetail_11844	TAACTTGTTCTTTCTTTTTTTTTTTTTTAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGTATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCTGGGCGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGTCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCGCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2389:HG4_Ill_Krunchall_22626:HG3_Ill_Krunchall_21863:HG2_Ill_Krunchall_22286:HG2_10X_allpass_2566:HG4_PB_assemblyticsfalcon_10341:HG2_PB_assemblyticsfalcon_10546:HG2_PB_assemblyticsPBcR_10153:HG2_PB_HySA_30334:HG3_PB_HySA_25138:HG4_PB_pbsv_16571:HG2_Ill_tnscope_1769:HG4_PB_SVrefine2PBcRDovetail_8316:HG4_PB_HySA_24267:HG4_Ill_SVrefine2DISCOVARDovetail_11625:HG4_Ill_MetaSV_2000:HG4_Ill_GATKHCSBGrefine_11289:HG4_10X_allpass_3008:HG3_PB_pbsv_16300:HG3_PB_SVrefine2PBcRDovetail_8037:HG3_PB_SVrefine2Falcon1Dovetail_10287:HG3_Ill_SVrefine2DISCOVARDovetail_11844:HG3_Ill_MetaSV_2068:HG3_Ill_GATKHCSBGrefine_10862:HG3_10X_allpass_3168:HG2_PB_pbsv_16650:HG2_PB_SVrefine2PBcRplusDovetail_4328:HG2_PB_SVrefine2PB10Xhap12_12069:HG2_PB_SVrefine2Falcon1plusDovetail_4718:HG2_Ill_SVrefine2DISCOVARplusDovetail_5080:HG2_Ill_MetaSV_1926:HG2_Ill_GATKHCSBGrefine_10927:HG2_10X_SVrefine210Xhap12_11523;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11523:HG2_Ill_GATKHCSBGrefine_10927:HG2_Ill_MetaSV_1926:HG2_Ill_SVrefine2DISCOVARplusDovetail_5080:HG2_PB_SVrefine2Falcon1plusDovetail_4718:HG2_PB_SVrefine2PB10Xhap12_12069:HG2_PB_SVrefine2PBcRplusDovetail_4328:HG2_PB_pbsv_16650:HG3_10X_allpass_3168:HG3_Ill_GATKHCSBGrefine_10862:HG3_Ill_MetaSV_2068:HG3_Ill_SVrefine2DISCOVARDovetail_11844:HG3_PB_SVrefine2Falcon1Dovetail_10287:HG3_PB_SVrefine2PBcRDovetail_8037:HG3_PB_pbsv_16300:HG4_10X_allpass_3008:HG4_Ill_GATKHCSBGrefine_11289:HG4_Ill_MetaSV_2000:HG4_Ill_SVrefine2DISCOVARDovetail_11625:HG4_PB_HySA_24267:HG4_PB_SVrefine2PBcRDovetail_8316;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0284593;ClusterMaxSizeDiff=0.0284593;ClusterMaxEditDist=0.0284593;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1025;DistBack=14565;DistForward=-465;DistMin=-465;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=17:18791139-18792178;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1463.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:86:./.:0:3:0:14:1/1:0:31:0:22:1/1:0:40:1/1:1:58:1012:.:.
chr17	19410125	HG3_10X_allpass_3169	TGGGAGGCTAAGGCAGGAGAATCGCTTGAAACCGGGAAGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACACAGCAAGACCCTGTCTAAAAAAAAAAAAAAAGCCAGGCTAAGTGTCTCAAGCCTGTAATTCCAGCACTTTGGGAGGCCTAGGCGGGCGGATCACCTGAGGTCAGTAGTTCAATATCAGCCTGGCCAACATGGAGAAACCCTGTCTCTACTAAAAATGCAAAAAAAATTAGCCAGGCGTGGTGGCGGGCGTCAGTAATCCCAGCTACTCGGGAGGCTA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11528:HG4_PB_SVrefine2Falcon1Dovetail_10306:HG3_PB_SVrefine2Falcon1Dovetail_10290:HG4_PB_assemblyticsfalcon_10347:HG3_PB_assemblyticsfalcon_10539:HG2_PB_pbsv_16653:HG2_Ill_Krunchall_22289:HG3_PB_pbsv_16304:HG2_PB_HySA_30341:HG2_Ill_MetaSV_1928:HG3_Ill_scalpel_15836:HG3_Ill_GATKHCSBGrefine_10864:HG3_10X_allpass_3169:HG2_Ill_scalpel_15532:HG2_Ill_manta_4476:HG2_Ill_SpiralSDKrefine_6655:HG2_Ill_GATKHCSBGrefine_10930:HG2_10X_allpass_2567:HG3_Ill_SVrefine2DISCOVARDovetail_11848:HG2_PB_SVrefine2PB10Xhap12_12075:HG2_Ill_SVrefine2DISCOVARplusDovetail_5088;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_2567:HG2_Ill_GATKHCSBGrefine_10930:HG2_Ill_SpiralSDKrefine_6655:HG2_Ill_manta_4476:HG2_Ill_scalpel_15532:HG3_10X_allpass_3169:HG3_Ill_GATKHCSBGrefine_10864:HG3_Ill_scalpel_15836;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0429752;ClusterMaxSizeDiff=0.0429752;ClusterMaxEditDist=0.171334;PBcalls=8;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-307;DistBack=-308;DistForward=-299;DistMin=-308;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=268;REFWIDENED=17:19409970-19410544;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1464.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:./.:27:14:2:5:0|1:28:1:0:13:0/1:22:30:0/1:20:4:.:.:.
chr17	19543417	HG3_Ill_GATKHCSBGrefine_10865	CAATAATAAAAATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAT	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_10162:HG4_PB_pbsv_16580:HG4_Ill_Krunchall_22629:HG2_PB_assemblyticsfalcon_10556:HG4_PB_assemblyticsfalcon_10353:HG2_PB_pbsv_16656:HG4_PB_HySA_24275:HG4_Ill_MetaSV_2002:HG3_Ill_MetaSV_2070:HG2_PB_HySA_30346:HG2_Ill_MetaSV_1929:HG4_PB_SVrefine2PBcRDovetail_8321:HG4_PB_SVrefine2Falcon1Dovetail_10310:HG4_Ill_scalpel_15181:HG4_Ill_SVrefine2DISCOVARDovetail_11631:HG4_Ill_GATKHCSBGrefine_11291:HG4_10X_allpass_3009:HG3_PB_SVrefine2PBcRDovetail_8041:HG3_PB_SVrefine2Falcon1Dovetail_10293:HG3_Ill_manta_3655:HG3_Ill_GATKHCSBGrefine_10865:HG3_10X_allpass_3170:HG2_PB_SVrefine2PBcRplusDovetail_4334:HG2_PB_SVrefine2Falcon1plusDovetail_4726:HG2_Ill_manta_4477:HG2_Ill_breakscan11_2390:HG2_Ill_SVrefine2DISCOVARplusDovetail_5090:HG2_Ill_GATKHCSBGrefine_10931:HG2_10X_allpass_2568:HG2_10X_SVrefine210Xhap12_11530:HG3_PB_HySA_25149:HG3_PB_pbsv_16309:HG3_PB_assemblyticsfalcon_10547;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11530:HG2_10X_allpass_2568:HG2_Ill_GATKHCSBGrefine_10931:HG2_Ill_SVrefine2DISCOVARplusDovetail_5090:HG2_Ill_breakscan11_2390:HG2_Ill_manta_4477:HG2_PB_SVrefine2Falcon1plusDovetail_4726:HG2_PB_SVrefine2PBcRplusDovetail_4334:HG3_10X_allpass_3170:HG3_Ill_GATKHCSBGrefine_10865:HG3_Ill_manta_3655:HG3_PB_SVrefine2Falcon1Dovetail_10293:HG3_PB_SVrefine2PBcRDovetail_8041:HG4_10X_allpass_3009:HG4_Ill_GATKHCSBGrefine_11291:HG4_Ill_SVrefine2DISCOVARDovetail_11631:HG4_Ill_scalpel_15181:HG4_PB_SVrefine2Falcon1Dovetail_10310:HG4_PB_SVrefine2PBcRDovetail_8321;NumExactMatchSVs=19;ClusterMaxShiftDist=0.10299;ClusterMaxSizeDiff=0.10299;ClusterMaxEditDist=0.10299;PBcalls=16;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-308;DistBack=7117;DistForward=-298;DistMin=-298;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=17:19543418-19543741;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1465.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:43:0|1:32:8:1:30:1|0:0:35:48:0:0/1:18:23:0/1:26:12:.:.:.
chr17	19902283	HG2_PB_SVrefine2Falcon1plusDovetail_4727	CGGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCCGAGATGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAAATTAGCCAGGCGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTGGAGAGGCTGAGGTAGGAGAATGGTGTGAACTTGGCAGGTGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGGGACTGAGCGAGACTCCGTCTCCAAAAAAAAAAGAGAAATATGGGAGTCATCAGTCTACCGATGGTATTTAAAGCCATGAGGCAGGAGGAGTTTATGAGGGGAGCAAGTATAGGTAGAGAGGCCGTCTAAAGACTGTACTCTGGGCCGGGTGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11532:HG3_PB_HySA_25151:HG3_PB_SVrefine2Falcon1Dovetail_10294:HG4_PB_assemblyticsfalcon_10355:HG4_PB_SVrefine2Falcon1Dovetail_10311:HG3_PB_assemblyticsfalcon_10549:HG2_PB_HySA_30349:HG2_PB_pbsv_16658:HG3_PB_HySA_25150:HG3_PB_pbsv_16312:HG3_10X_allpass_3172:HG2_10X_allpass_2569:HG3_Ill_MetaSV_2072:HG2_Ill_MetaSV_1930:HG2_PB_SVrefine2PB10Xhap12_12081:HG2_Ill_tnscope_1770:HG2_PB_PB10Xdip_13024:HG3_PB_SVrefine2PBcRDovetail_8043:HG2_PB_SVrefine2PBcRplusDovetail_4336:HG2_PB_SVrefine2PB10Xhap12_12080:HG2_PB_SVrefine2Falcon1plusDovetail_4727:HG2_PB_PB10Xdip_13025;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11532:HG3_PB_SVrefine2PBcRDovetail_8043:HG2_PB_SVrefine2PBcRplusDovetail_4336:HG2_PB_SVrefine2PB10Xhap12_12080:HG2_PB_SVrefine2Falcon1plusDovetail_4727:HG2_PB_PB10Xdip_13025;NumExactMatchSVs=6;ClusterMaxShiftDist=0.130024;ClusterMaxSizeDiff=0.130024;ClusterMaxEditDist=0.156028;PBcalls=16;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-403;DistBack=32300;DistForward=-122;DistMin=-122;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=279;REFWIDENED=17:19902284-19902965;PctSeqSimilarity=0.9722;PctSizeSimilarity=1;PctRecOverlap=0.948;SizeDiff=0;StartDistance=-21;EndDistance=-21;GTMatch=0;TruScore=97;MatchId=1466.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:32:0|1:18:3:2:19:./.:33:0:2:21:0/1:45:14:./.:44:5:.:.:.
chr17	21233785	HG2_PB_SVrefine2PBcRplusDovetail_4343	TGGAGGACACTGGACAAGGGAGTTTCTCCCCTGAGAAGCATCAGGGCCTGATGAAAGGCCCATCCTCATCCTCAAGGTAGGGGCTGCCCACAGACTGACCGGT	G	20	PASS	ClusterIDs=HG3_PB_pbsv_16319:HG2_PB_pbsv_16667:HG3_PB_SVrefine2Falcon1Dovetail_10301:HG2_PB_SVrefine2PBcRplusDovetail_4343:HG2_PB_SVrefine2PB10Xhap12_12091:HG2_PB_PB10Xdip_13040:HG2_Ill_SpiralSDKrefine_6673:HG2_PB_SVrefine2Falcon2Bionano_8216:HG2_10X_allpass_2571:HG3_Ill_manta_3657:HG2_Ill_manta_4478;NumClusterSVs=11;ExactMatchIDs=HG2_PB_PB10Xdip_13040:HG2_PB_SVrefine2PB10Xhap12_12091:HG2_PB_SVrefine2PBcRplusDovetail_4343:HG3_PB_SVrefine2Falcon1Dovetail_10301;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0294118;ClusterMaxSizeDiff=0.0292683;ClusterMaxEditDist=0.0784314;PBcalls=7;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-102;DistBack=-56;DistForward=-28;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=17:21233785-21233887;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9902;PctRecOverlap=0.9806;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=1467.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:22:0|1:37:1:1:12:0|1:74:1:0:8:./.:59:6:./.:.:.:.:.:.
chr17	26030427	HG4_Ill_svaba_20560	AGGTCCAAAATGATGAAATTTGAAAATAAGCTCTATTAGGTGCACTATTAAGTAGAAAGAGCCTCTCAAGTTT	A	20	PASS	ClusterIDs=HG2_PB_HySA_30403:HG2_PB_HySA_30405:HG2_PB_PB10Xdip_13080:HG4_PB_pbsv_16602:HG4_Ill_svaba_20560:HG4_Ill_Krunchall_22685:HG4_Ill_GATKHC_26354:HG4_Ill_GATKHCSBGrefine_11304:HG4_Ill_250bpfermikitraw_21668:HG4_Ill_150bpfermikitraw_20859:HG4_CG_vcfBeta_10419:HG4_10X_allpass_3018:HG3_PB_pbsv_16328:HG3_Ill_svaba_20758:HG3_Ill_scalpel_15848:HG3_Ill_GATKHC_26214:HG3_Ill_GATKHCSBGrefine_10875:HG3_Ill_250bpfermikitraw_21351:HG3_Ill_150bpfermikitraw_20775:HG3_CG_vcfBeta_8919:HG3_10X_allpass_3176:HG2_PB_assemblyticsPBcR_10190:HG2_Ill_svaba_20580:HG2_Ill_scalpel_15547:HG2_Ill_breakscan11_2391:HG2_Ill_Krunchall_22344:HG2_Ill_GATKHC_26388:HG2_Ill_GATKHCSBGrefine_10942:HG2_Ill_250bpfermikitraw_22005:HG2_Ill_150bpfermikitraw_20725:HG2_CG_vcfBeta_9413:HG2_10X_allpass_2574:HG3_Ill_Krunchall_21913:HG2_PB_HySA_30404:HG2_PB_pbsv_16678;NumClusterSVs=35;ExactMatchIDs=HG2_10X_allpass_2574:HG2_CG_vcfBeta_9413:HG2_Ill_150bpfermikitraw_20725:HG2_Ill_250bpfermikitraw_22005:HG2_Ill_GATKHCSBGrefine_10942:HG2_Ill_GATKHC_26388:HG2_Ill_Krunchall_22344:HG2_Ill_breakscan11_2391:HG2_Ill_scalpel_15547:HG2_Ill_svaba_20580:HG2_PB_assemblyticsPBcR_10190:HG3_10X_allpass_3176:HG3_CG_vcfBeta_8919:HG3_Ill_150bpfermikitraw_20775:HG3_Ill_250bpfermikitraw_21351:HG3_Ill_GATKHCSBGrefine_10875:HG3_Ill_GATKHC_26214:HG3_Ill_scalpel_15848:HG3_Ill_svaba_20758:HG3_PB_pbsv_16328:HG4_10X_allpass_3018:HG4_CG_vcfBeta_10419:HG4_Ill_150bpfermikitraw_20859:HG4_Ill_250bpfermikitraw_21668:HG4_Ill_GATKHCSBGrefine_11304:HG4_Ill_GATKHC_26354:HG4_Ill_Krunchall_22685:HG4_Ill_svaba_20560:HG4_PB_pbsv_16602;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0551724;ClusterMaxSizeDiff=0.0551724;ClusterMaxEditDist=0.0827586;PBcalls=8;Illcalls=21;TenXcalls=3;CGcalls=3;PBexactcalls=3;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=3;HG2count=16;HG3count=10;HG4count=9;NumTechs=4;NumTechsExact=4;SVLEN=-72;DistBack=189;DistForward=22620;DistMin=189;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=17:26030426-26030500;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1468.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:43:0|1:30:1:3:42:0|1:28:0:0:21:0/1:32:26:./.:.:.:.:.:.
chr17	26844597	HG2_Ill_GATKHC_26393	TACCTCCACAGGGTACACACCTCCACAGGATCCATACCTCCACAGGGTACACACCTCCACAGGGTACAG	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_10194:HG2_PB_pbsv_16684:HG3_PB_pbsv_16334:HG2_PB_assemblyticsfalcon_10582:HG4_PB_assemblyticsfalcon_10380:HG4_PB_pbsv_16607:HG4_Ill_GATKHC_26359:HG3_Ill_GATKHC_26219:HG2_Ill_GATKHC_26393:HG3_PB_assemblyticsfalcon_10576;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHC_26393:HG3_Ill_GATKHC_26219:HG4_Ill_GATKHC_26359;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0289855;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.0441176;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-68;DistBack=-604;DistForward=83102;DistMin=-604;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=75;REFWIDENED=17:26844596-26844741;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1469.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:47:1/1:5:24:1:14:./.:12:3:5:3:./.:1:2:./.:.:.:.:.:.
chr17	28209545	HG2_Ill_breakscan11_2393	GTGGATCACAAGGTCAGGAGTTCGAGACCAGCCTGGCCAAAATGGTGAAACCTCGTCTCTATTAAAACTGCAAAAATTAGC	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_1090:HG2_PB_pbsv_16688:HG4_PB_assemblyticsfalcon_10391:HG2_PB_assemblyticsfalcon_10594:HG4_PB_SVrefine2Falcon1Dovetail_10324:HG3_PB_HySA_25194:HG3_PB_pbsv_16338:HG3_Ill_svaba_20777:HG3_Ill_scalpel_15858:HG3_Ill_Krunchall_21929:HG3_Ill_GATKHC_26236:HG3_Ill_GATKHCSBGrefine_10880:HG3_Ill_250bpfermikitraw_21369:HG3_Ill_150bpfermikitraw_20792:HG3_CG_vcfBeta_8928:HG3_10X_allpass_3180:HG2_Ill_svaba_20598:HG2_Ill_breakscan11_2393:HG2_Ill_SpiralSDKrefine_6697:HG2_Ill_Krunchall_22359:HG2_Ill_GATKHC_26404:HG2_Ill_GATKHCSBGrefine_10945:HG2_Ill_250bpfermikitraw_22022:HG2_Ill_150bpfermikitraw_20741:HG2_CG_vcfBeta_9423:HG2_10X_allpass_2577:HG3_Ill_Spiral_17048;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_2577:HG2_CG_vcfBeta_9423:HG2_Ill_150bpfermikitraw_20741:HG2_Ill_250bpfermikitraw_22022:HG2_Ill_GATKHCSBGrefine_10945:HG2_Ill_GATKHC_26404:HG2_Ill_Krunchall_22359:HG2_Ill_SpiralSDKrefine_6697:HG2_Ill_breakscan11_2393:HG2_Ill_svaba_20598:HG3_10X_allpass_3180:HG3_CG_vcfBeta_8928:HG3_Ill_150bpfermikitraw_20792:HG3_Ill_250bpfermikitraw_21369:HG3_Ill_GATKHCSBGrefine_10880:HG3_Ill_GATKHC_26236:HG3_Ill_Krunchall_21929:HG3_Ill_scalpel_15858:HG3_Ill_svaba_20777:HG3_PB_pbsv_16338;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0628931;ClusterMaxSizeDiff=0.0628931;ClusterMaxEditDist=0.0628931;PBcalls=6;Illcalls=17;TenXcalls=2;CGcalls=2;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=2;CGexactcalls=2;HG2count=13;HG3count=12;HG4count=2;NumTechs=4;NumTechsExact=4;SVLEN=-80;DistBack=2212;DistForward=12586;DistMin=2212;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=17:28209546-28209628;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1470.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:26:0|1:35:5:0:19:0|1:41:1:0:32:0/1:30:18:./.:.:.:.:.:.
chr17	29233030	HG2_Ill_manta_4481	AGCCGTATTCCATTAGCCTCTAGGGTCAGAGGCTAATGACAGACGGGAAATCACCCCAGTGTTCCAAGCACCCTACCTCCC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4748:HG3_Ill_GATKHC_26246:HG3_Ill_GATKHCSBGrefine_10885:HG3_Ill_manta_3659:HG3_Ill_Spiral_17056:HG3_PB_pbsv_16348:HG2_PB_pbsv_16697:HG3_PB_HySA_25200:HG3_Ill_Krunchall_21935:HG3_Ill_GATKHCSBGrefine_10884:HG3_Ill_250bpfermikitraw_21374:HG3_Ill_150bpfermikitraw_20800:HG2_Ill_manta_4481:HG2_Ill_SpiralSDKrefine_6706:HG2_Ill_GATKHCSBGrefine_10949:HG2_Ill_250bpfermikitraw_22028:HG2_PB_SVrefine2PB10Xhap12_12114:HG2_PB_SVrefine2Falcon2Bionano_8229;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22028:HG2_Ill_GATKHCSBGrefine_10949:HG2_Ill_SpiralSDKrefine_6706:HG2_Ill_manta_4481:HG3_Ill_150bpfermikitraw_20800:HG3_Ill_250bpfermikitraw_21374:HG3_Ill_GATKHCSBGrefine_10884:HG3_Ill_Krunchall_21935;NumExactMatchSVs=8;ClusterMaxShiftDist=0.089172;ClusterMaxSizeDiff=0.089172;ClusterMaxEditDist=0.0903226;PBcalls=6;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-80;DistBack=8;DistForward=-8;DistMin=-8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=93;REFWIDENED=17:29233023-29233195;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1471.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:42:0|1:28:4:3:22:0|1:18:0:0:7:0/1:39:21:./.:.:.:.:.:.
chr17	29659591	HG4_Ill_manta_3811	GGTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTACTGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGT	G	20	PASS	ClusterIDs=HG2_PB_pbsv_16698:HG2_PB_assemblyticsfalcon_10606:HG4_PB_SVrefine2PBcRDovetail_8335:HG4_Ill_Krunchall_22706:HG3_PB_SVrefine2PBcRDovetail_8062:HG3_Ill_SVrefine2DISCOVARDovetail_11881:HG2_PB_SVrefine2PB10Xhap12_12115:HG2_PB_SVrefine2Falcon2Bionano_8230:HG2_PB_SVrefine2Falcon1plusDovetail_4749:HG4_PB_HySA_24343:HG3_Ill_MetaSV_2083:HG2_PB_HySA_30437:HG2_Ill_tnscope_1775:HG2_Ill_MetaSV_1942:HG4_Ill_scalpel_15203:HG4_Ill_manta_3811:HG4_Ill_MetaSV_2015:HG4_Ill_GATKHCSBGrefine_11309:HG4_10X_allpass_3021:HG3_Ill_scalpel_15863:HG3_Ill_manta_3660:HG3_Ill_GATKHCSBGrefine_10886:HG3_10X_allpass_3183:HG2_Ill_scalpel_15559:HG2_Ill_manta_4482:HG2_Ill_GATKHCSBGrefine_10950:HG2_10X_allpass_2579:HG4_PB_pbsv_16617:HG3_PB_pbsv_16349:HG2_Ill_breakscan11_2394;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_2579:HG2_Ill_GATKHCSBGrefine_10950:HG2_Ill_manta_4482:HG2_Ill_scalpel_15559:HG3_10X_allpass_3183:HG3_Ill_GATKHCSBGrefine_10886:HG3_Ill_manta_3660:HG3_Ill_scalpel_15863:HG4_10X_allpass_3021:HG4_Ill_GATKHCSBGrefine_11309:HG4_Ill_MetaSV_2015:HG4_Ill_manta_3811:HG4_Ill_scalpel_15203;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0286944;ClusterMaxSizeDiff=0.0286944;ClusterMaxEditDist=0.028777;PBcalls=11;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-350;DistBack=5576;DistForward=-346;DistMin=-346;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=17:29659592-29659941;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1472.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:./.:0:1:1:5:1/1:0:13:0:8:1/1:0:53:1/1:1:21:.:.:.
chr17	30106624	HG3_PB_SVrefine2Falcon1Dovetail_10313	CAAGGAAGGGGCCCTGAACCAAGGCATGCCGGCAGCCTCCAGGAGTTGGGAGAAGCAAGGAAACAGATTCTCTCCCCGACAGCCACCAGAGGGTTGCAACCCTGCCAACACCTTAATTTCAGCGCAGTGAAACCCATTTCAGACTTCTGGCCTCCAGAACTATGAGAAAATAAATCCATGTTGTTTGAAGAAGCCCAGTTTGTGATAGTTTGTTACCAGTTGCACAGGGCCCATGCTCTGAAGGGCCCCATGCTCTTTTTGATGCTCAGCTCATGCTTCTTTGAAATTCCAATTTTTGAAAAGGGAGCCCCACATTTTCATTGTGTGCTGGGCACTGCAGTAACTGGTCCAGGAGCCTCCCACCCACCCCCCACCCCCACTAAATCAAACACATCACCTGGAACATTAGCATTGCTGAAAAATAAATGAGTCAGAAAGGCCTTCTTTTCATAATAAAGCAATCATAGACATTGTGGGAGAGAGTACAAAATTCACATAAATTTAAGAGGTAAAACAAGAGACTTCAATTGTTTTTTTAACCTCACAAATGTTACTTCTGGCCAAATACCCAGGCCCACAGGGAGAGGCACTAGCCCTCCTTCGCCATCAGGGTGGCCACCCTGGAGCAGCCACAGCATTTCTCACTCTCCACCCAGTCTTCTCGTGATGCCACCTCCAGGAATCTTCTGAGAATTGGTCACAGAGTGTTGGTGCCTCCACTCCAGCCCACTCTTTCTACATCAAAACTCCTTGGATTCTCCTGCCTCTCTCATGGCTTCTGTCCCCAAAAAGCGTAGCTCCACTGGCATATTTGTAGCACAGACCCTGTCGGGGACTCACTGGTCAGCTGTCCCAGCCTGGGCCCCTGGGTTAAGGTCATGGCTTGTTCAGCTGGTGTTGAAATGAGTCTGCCTGGGATT	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1943:HG2_Ill_tnscope_1776:HG4_PB_SVrefine2Falcon1Dovetail_10331:HG3_PB_assemblyticsfalcon_10599:HG3_PB_SVrefine2PBcRDovetail_8065:HG3_PB_SVrefine2Falcon1Dovetail_10313:HG3_Ill_manta_3663:HG3_Ill_SVrefine2DISCOVARDovetail_11883:HG3_Ill_GATKHCSBGrefine_10891:HG3_10X_allpass_3184:HG2_PB_pbsv_16702:HG2_PB_assemblyticsfalcon_10612:HG2_PB_assemblyticsPBcR_10214:HG2_PB_SVrefine2PB10Xhap12_12118:HG2_PB_SVrefine2Falcon2Bionano_8234:HG2_PB_SVrefine2Falcon1plusDovetail_4752:HG2_Ill_manta_4485:HG2_Ill_SpiralSDKrefine_6711:HG2_10X_allpass_2580:HG2_Ill_Krunchall_22368:HG3_Ill_MetaSV_2084:HG4_PB_assemblyticsfalcon_10407:HG3_Ill_Krunchall_21939:HG3_PB_pbsv_16354;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_2580:HG2_Ill_SpiralSDKrefine_6711:HG2_Ill_manta_4485:HG2_PB_SVrefine2Falcon1plusDovetail_4752:HG2_PB_SVrefine2Falcon2Bionano_8234:HG2_PB_SVrefine2PB10Xhap12_12118:HG2_PB_assemblyticsPBcR_10214:HG2_PB_assemblyticsfalcon_10612:HG2_PB_pbsv_16702:HG3_10X_allpass_3184:HG3_Ill_GATKHCSBGrefine_10891:HG3_Ill_SVrefine2DISCOVARDovetail_11883:HG3_Ill_manta_3663:HG3_PB_SVrefine2Falcon1Dovetail_10313:HG3_PB_SVrefine2PBcRDovetail_8065:HG3_PB_assemblyticsfalcon_10599:HG4_PB_SVrefine2Falcon1Dovetail_10331;NumExactMatchSVs=17;ClusterMaxShiftDist=0.135903;ClusterMaxSizeDiff=0.135903;ClusterMaxEditDist=0.135903;PBcalls=12;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-919;DistBack=47929;DistForward=-911;DistMin=-911;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=17:30106625-30107543;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1473.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:50:0|1:30:3:2:36:1|0:0:27:61:0:0/1:53:7:0/1:69:39:.:.:.
chr17	32484897	HG4_Ill_250bpfermikitraw_21717	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTCTGATCCTGGATTTGTCAGATGGAAGTACATTTGGGCA	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_22056:HG2_PB_pbsv_16714:HG4_PB_pbsv_16636:HG4_PB_HySA_24371:HG4_PB_assemblyticsfalcon_10426:HG4_Ill_Krunchall_22731:HG4_Ill_GATKHCSBGrefine_11329:HG4_Ill_250bpfermikitraw_21717:HG2_Ill_scalpel_15578:HG2_Ill_Krunchall_22391:HG2_Ill_GATKHCSBGrefine_10966;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22056:HG4_PB_assemblyticsfalcon_10426:HG4_Ill_Krunchall_22731:HG4_Ill_GATKHCSBGrefine_11329:HG4_Ill_250bpfermikitraw_21717:HG2_Ill_scalpel_15578:HG2_Ill_Krunchall_22391:HG2_Ill_GATKHCSBGrefine_10966;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0628931;ClusterMaxSizeDiff=0.0628931;ClusterMaxEditDist=0.0628931;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-81;DistBack=6751;DistForward=17201;DistMin=6751;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=69;REFWIDENED=17:32484898-32485047;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1474.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:23:0|1:41:2:0:21:./.:30:3:1:10:0/1:6:18:./.:.:.:.:.:.
chr17	34376278	HG4_Ill_svaba_20611	TAAAGAAAAACGCTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2396:HG4_PB_assemblyticsfalcon_10439:HG3_PB_assemblyticsfalcon_10633:HG2_PB_assemblyticsfalcon_10647:HG2_PB_assemblyticsPBcR_10256:HG4_PB_pbsv_16641:HG3_Ill_Krunchall_21973:HG2_Ill_Krunchall_22407:HG3_PB_pbsv_16371:HG2_PB_pbsv_16719:HG4_Ill_MetaSV_2023:HG3_Ill_MetaSV_2092:HG2_Ill_tnscope_1777:HG2_Ill_MetaSV_1953:HG4_PB_SVrefine2PBcRDovetail_8348:HG4_PB_SVrefine2Falcon1Dovetail_10345:HG4_Ill_svaba_20611:HG4_Ill_scalpel_15235:HG4_Ill_manta_3816:HG4_Ill_SVrefine2DISCOVARDovetail_11680:HG4_Ill_GATKHCSBGrefine_11333:HG4_10X_allpass_3026:HG3_PB_SVrefine2PBcRDovetail_8075:HG3_PB_SVrefine2Falcon1Dovetail_10323:HG3_Ill_svaba_20810:HG3_Ill_scalpel_15894:HG3_Ill_manta_3668:HG3_Ill_SVrefine2DISCOVARDovetail_11903:HG3_Ill_GATKHCSBGrefine_10908:HG3_10X_allpass_3186:HG2_PB_SVrefine2PBcRplusDovetail_4376:HG2_PB_SVrefine2PB10Xhap12_12134:HG2_PB_SVrefine2Falcon2Bionano_8245:HG2_PB_SVrefine2Falcon1plusDovetail_4766:HG2_Ill_svaba_20632:HG2_Ill_scalpel_15592:HG2_Ill_manta_4492:HG2_Ill_SVrefine2DISCOVARplusDovetail_5130:HG2_Ill_GATKHCSBGrefine_10970:HG2_10X_allpass_2581:HG2_10X_SVrefine210Xhap12_11562;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11562:HG2_10X_allpass_2581:HG2_Ill_GATKHCSBGrefine_10970:HG2_Ill_SVrefine2DISCOVARplusDovetail_5130:HG2_Ill_manta_4492:HG2_Ill_scalpel_15592:HG2_Ill_svaba_20632:HG2_PB_SVrefine2Falcon1plusDovetail_4766:HG2_PB_SVrefine2Falcon2Bionano_8245:HG2_PB_SVrefine2PB10Xhap12_12134:HG2_PB_SVrefine2PBcRplusDovetail_4376:HG3_10X_allpass_3186:HG3_Ill_GATKHCSBGrefine_10908:HG3_Ill_SVrefine2DISCOVARDovetail_11903:HG3_Ill_manta_3668:HG3_Ill_scalpel_15894:HG3_Ill_svaba_20810:HG3_PB_SVrefine2Falcon1Dovetail_10323:HG3_PB_SVrefine2PBcRDovetail_8075:HG4_10X_allpass_3026:HG4_Ill_GATKHCSBGrefine_11333:HG4_Ill_SVrefine2DISCOVARDovetail_11680:HG4_Ill_manta_3816:HG4_Ill_scalpel_15235:HG4_Ill_svaba_20611:HG4_PB_SVrefine2Falcon1Dovetail_10345:HG4_PB_SVrefine2PBcRDovetail_8348;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0892308;ClusterMaxSizeDiff=0.0892308;ClusterMaxEditDist=0.0892308;PBcalls=15;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=6519;DistForward=-315;DistMin=-315;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=17:34376279-34376624;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1475.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:73:1/1:0:28:1:12:1/1:0:22:0:19:1/1:0:37:0/1:4:13:.:.:.
chr17	35118328	HG2_Ill_250bpfermikitraw_22079	GTAGGTGTGTATAGTGAGTGTGCCAGTGTGTGACAGAGTATGAGTGTGGATGTGTGAA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_22079:HG3_PB_pbsv_16373:HG2_PB_pbsv_16721:HG4_Ill_GATKHCSBGrefine_11337:HG4_Ill_250bpfermikitraw_21736:HG3_Ill_GATKHC_26300:HG3_Ill_GATKHCSBGrefine_10912:HG3_Ill_250bpfermikitraw_21417:HG2_Ill_GATKHCSBGrefine_10973;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22079:HG4_Ill_GATKHCSBGrefine_11337:HG4_Ill_250bpfermikitraw_21736:HG3_Ill_GATKHC_26300:HG3_Ill_GATKHCSBGrefine_10912:HG3_Ill_250bpfermikitraw_21417:HG2_Ill_GATKHCSBGrefine_10973;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0530973;PBcalls=2;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-57;DistBack=109;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=62;REFWIDENED=17:35118327-35118448;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1476.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:32:0|1:25:8:3:23:./.:142:38:50:54:./.:6:0:./.:.:.:.:.:.
chr17	35146275	HG2_Ill_GATKHCSBGrefine_10974	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_16644:HG4_Ill_GATKHC_26435:HG4_Ill_GATKHCSBGrefine_11338:HG3_PB_assemblyticsfalcon_10637:HG3_Ill_manta_3670:HG3_Ill_GATKHC_26302:HG3_Ill_GATKHCSBGrefine_10913:HG3_Ill_250bpfermikitraw_21419:HG2_Ill_GATKHC_26469:HG2_Ill_GATKHCSBGrefine_10974:HG2_PB_assemblyticsPBcR_10263:HG4_PB_assemblyticsfalcon_10444:HG4_Ill_Krunchall_22751:HG3_Ill_Krunchall_21979:HG2_Ill_manta_4494:HG2_Ill_Krunchall_22413:HG2_PB_assemblyticsfalcon_10653:HG3_PB_pbsv_16374:HG2_PB_pbsv_16722;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_10974:HG2_Ill_GATKHC_26469:HG3_Ill_250bpfermikitraw_21419:HG3_Ill_GATKHCSBGrefine_10913:HG3_Ill_GATKHC_26302:HG3_Ill_manta_3670:HG3_PB_assemblyticsfalcon_10637:HG4_Ill_GATKHCSBGrefine_11338:HG4_Ill_GATKHC_26435;NumExactMatchSVs=9;ClusterMaxShiftDist=0.184615;ClusterMaxSizeDiff=0.184615;ClusterMaxEditDist=0.2;PBcalls=7;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=2122;DistForward=3429;DistMin=2122;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=100;REFWIDENED=17:35146210-35146379;PctSeqSimilarity=0.9403;PctSizeSimilarity=0.8857;PctRecOverlap=0.8873;SizeDiff=8;StartDistance=0;EndDistance=8;GTMatch=0;TruScore=90;MatchId=1477.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:42:1/1:2:9:5:30:./.:9:6:0:17:0/1:9:44:./.:.:.:.:.:.
chr17	35250487	HG4_Ill_manta_3817	CCATCCTGCAAAGCAAATATGAATTATTTCAGAACATTTTCAAATGAAAAATCCTCTCTTCCTGCCCAGCCCTGTGATGCATTAACTCCTCTTTCCACCCTTCTCACCTGTGTGGAGAGTGGCCAGGCCAGGAGGGCCCCACCCAGCCCAGAGCTCCCAGGGAATGGGGCTGGAAGTCAGCCCATCGTTTCTTTGGCCTGAACGCCTTTTGGTTTGCTCAAAGTGTCTCCTGGTTCCTTGTCTGCACCCAGGATCAGTGAGCAAGCATTACCGGGAGCCTTTCCTACTCCTAACATTGTGTGTCCCTTCACAGCTTCCAGGGAACCCTCCCTACGCTCCAGGAAAATGGGCTGTATTCTTCCCATTTTACAGATGGGAGACAGGTTCAAAAGGTTTCAGTGACAAGCCCAGGGTCTGATAAATGGCAGAGCTGGGACTCAAA	GGGAGC	20	PASS	ClusterIDs=HG4_PB_pbsv_16645:HG4_PB_SVrefine2PBcRDovetail_8350:HG4_PB_assemblyticsfalcon_10446:HG4_Ill_manta_3817:HG3_PB_SVrefine2Falcon1Dovetail_10324:HG2_Ill_manta_4495:HG2_Ill_SVrefine2DISCOVARplusDovetail_5137:HG2_Ill_tnscope_1778:HG4_Ill_MetaSV_2024:HG2_Ill_MetaSV_1954:HG2_Ill_Krunchall_22415:HG2_PB_pbsv_16723:HG3_PB_assemblyticsfalcon_10638:HG4_10X_allpass_3029;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5137:HG2_Ill_manta_4495:HG3_PB_SVrefine2Falcon1Dovetail_10324:HG4_Ill_manta_3817:HG4_PB_assemblyticsfalcon_10446;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0297143;ClusterMaxSizeDiff=0.0297143;ClusterMaxEditDist=0.0297143;PBcalls=6;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-436;DistBack=28526;DistForward=5950;DistMin=5950;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=17:35250487-35250928;PctSeqSimilarity=0.9569;PctSizeSimilarity=0.9908;PctRecOverlap=0.9774;SizeDiff=4;StartDistance=1;EndDistance=10;GTMatch=0;TruScore=97;MatchId=1478.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:49:22:0|1:45:0:0:20:./.:52:0:2:11:0/1:45:6:0/1:32:9:.:.:.
chr17	35755546	HG2_PB_SVrefine2PB10Xhap12_12138	ACTTTTTTTTTGAGACAGAGTCTGGCACTGTTGCCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTGGCCAGGCTGGTCTCGAACTCCTTATCTTGTGATTCGCCTGCCTCGGCCTCCCAAAGTTCTGAGATTACAGACATGAACCAACGCGGCCAGCCTGTGGTATCACTTTTTAACTCCTCTAACTCCCTCCCTCTGTTCTAGAAAGAAAAGAATTTGATTCGCATTTCCATGCTTTCAATGAAATCCTTTCACTCCAATGAACTCATTCTTCCTGGTAGATTAATTTTAAGCCTTTTATCTCTAGCTATAGATAATAATAATAGCTAATATTCGACGCACATTTACTATGTAAGAATTAACGTCTTTGCCTTCTACTAAAGTAATGTTAGGAAAACAAGTGGGTTTAGGGAGCATATCATTGGCCTGAACTACCATATCCTCAGAATCTGTCTCCCCATACACTCTCTTGCCTCAGTTTAATCTGCATACAATTCTCCACATTGTAACCAGTTTTTCAAAATACAGATTTGATCTTGTTACTCTTTTGCTAAAAAACTTTTAGTGAATTCCCACTGCTATCAGGATAAAGTACAAAACCCTCAAGACGACTGCCAAGGCCCTAGATAATCTGCCTCTCTCCAGTCTCCTCTGCCCCACTCTTCCCCTTCTCTAGCTTCAGTGGCAATGGACTAGCTCCTTTCCTGCCTCAAGTCCCATGCTGTTCTGTCTGCCTGGAATATTGTTTCTACTCTCTCATCCTCTTTCCCCTTCTTCACTACTATTAGCCGGTTTAACTTTCCACTCTTCCTTCAGATATTGGCTCAATAGTCACCTCCTCAGTCTGACCTTCTAAACTCCATCAGATTCTTCTATACTGTTTTATAGTGTAAATTTCCTTCGTGGTATTCATCTGTTGGTAATTATGTGTTAATTATGTGTTTTGGATTCAAAAGCCAAGGGAGGCTGGGTGCTGTGGCTCACGCCCATAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACTTGAAGTCAGGAGTTCGAGACCAGCTTAGCCAACATGGTGAAACCTCGTCTCTACTAAAAATACAAAAATTAGCCAGGCATTGTGGCGAGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAGTGACCCGAGATGGCGCCACTGCATTCCAGCCTGGGTGACAGAGGGAGTCTCCGTCTAAAAAAATGGAAAAAAGCCAAGGGGGACATTCAGGTCAGAGTTAAACAGATGAGGGAGTGAGCAAGAGATTGATGGAAAATTGGAAGCCACAGGAGAAGACAAGATTGCTTGAACTCATTGAATGGAAAAACACAAAAGAAGGAAGAGTGAAGAACAGAAACTTGGATGACAACAGGTAAGACAGAGAAGAGCCCATTAATCCAGAAAGGGAGAAGTAGATTTAAGAGAAAGAAGTAGCAGTAAAGGTGGGAGGCCAATCATCTGAGGTCAGGAGTTAGAGACCAGCCTGACCAACATGGTGAAACTCTGTCTCTACTAAAAATACAAAAATTAGCCGGGTGTGCTGGCGCATGCCTGTAATCCCAGCTACTTAGGGGACTGAGGCAGAAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGGGACGGCACCACTGCACTCCAGCCCGGGCAACAAGAGGGAGACTCCATCTCAAAAAAAGAAATTAGAATAACAGGAGTTAGTTTTAAAATTTAAATATTAGATGGCATTAGTCTGATAAGTATCTCTATAATATAGTGGAGTATAATGGGGTAATAATGCCTGAAATGCACTGGCCAAGGCTCTCTTCCTTGAATGGGCACTAAGTCAGCCCCAGCCCTCCCATTACGGTTCCATTACTGACTAACCTCTCTCTTTTTCAGGTTGATTCATTCTCCCTTTGGATATGCTATATATATTCTGTATTTTTCAGAGCCACTCTGTCTCCTAAACTAACTTTACATATCTCTGCTGTGATCCATTACCTTCTGAGACGGTATAGTGTCAGGGATTGTGGTAGTAGTCTGAATCTCCACTATGCTGCCTACTTACATTCTCTTAAGTATCAGTCTCTGCATCAGTAAAATGGGAGTAACACCATAAAATACGAGTAAACCCGTAGAGGGTTTCTTAGGGATTAAATGACAGAATATATACAGAAAGCCTTGAATAGTAGCTATTTTCAGTACCAAGGGAAACCCTGCTGTGTCATTTTGAATAGTGTGTTTGTCACTGCATGATTAAGTAGTAAAGGATTTCAGATAAACTGTTGTCTTTGGCATGATTATAGAATCTAGAAAATTAATAAAATAAGCAGGCAAAAGTTTTATGTGTTTGGCTGTGTAAAAATAACCAATTACAGTCATTTATGTAAACAATTTAACGTGTAGGGCCTAATTATCATGCAACACCATAACAATTACATATATTATTAAATATGCATCAGATTAACCTTGTTGTTAAGTTTTGATTACAATAAAAGTACTTTGTACTCTAAGGAACAGTCTTATAGTTAATTGCTAATAATGCATAAGTTTGTTCACTATTTGCATTAATTAAATGAGACATAGCTCCTGAGTTTGCTCTCCATTTGAGGCAAGGCTGGATCCTCCATCCTATATTGCAACTACACATTTGTCCTGCGACCTGTGAGATAACATACACTTTCCTTAGTATTCTATAGTGAGGAAAATGCTGAAGAAACTGCCAGTAAAAAAAAATTCTGTTTAATTGGCTGTTGTTCCTGAACCTACAGGTTTCCAGTAGATAAGAGTTTTTGATTTAAACAATGAAAAATTCTATGCTGAGCACTAGTTAACCTATGTAGAACAACTTCTAAATAAGCCCCAGGATCATCCTGTGGAGCACTTCTATAAATAAAATTATATTTGACTCCCACCATGAACAAGGTAGTAGTATACATACATATATCATCCCACCCCACCAC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5140:HG3_PB_assemblyticsfalcon_10644:HG2_PB_assemblyticsPBcR_10271:HG4_PB_assemblyticsfalcon_10451:HG3_PB_pbsv_16377:HG4_PB_pbsv_16647:HG2_PB_pbsv_16725:HG4_10X_allpass_3030:HG2_Ill_MetaSV_1956:HG3_10X_allpass_3187:HG2_10X_allpass_2582:HG4_PB_SVrefine2PBcRDovetail_8352:HG3_Ill_SVrefine2DISCOVARDovetail_11914:HG2_PB_SVrefine2PB10Xhap12_12138:HG2_PB_SVrefine2Falcon1plusDovetail_4770;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5140:HG4_PB_SVrefine2PBcRDovetail_8352:HG3_Ill_SVrefine2DISCOVARDovetail_11914:HG2_PB_SVrefine2PB10Xhap12_12138:HG2_PB_SVrefine2Falcon1plusDovetail_4770;NumExactMatchSVs=5;ClusterMaxShiftDist=0.152024;ClusterMaxSizeDiff=0.152024;ClusterMaxEditDist=0.152024;PBcalls=9;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-3133;DistBack=285;DistForward=-2350;DistMin=-2350;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=219;REFWIDENED=17:35755547-35758898;PctSeqSimilarity=0.881;PctSizeSimilarity=0.9994;PctRecOverlap=0.9665;SizeDiff=-2;StartDistance=-103;EndDistance=-105;GTMatch=0;TruScore=94;MatchId=1479.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:27:0|1:26:1:2:14:./.:5:10:64:0:0/0:60:0:0/1:266:98:2866:.:.
chr17	37448147	HG2_Ill_manta_4498	TTCCAAAGTATGTTATTTAATTTTCTAATCTTCCAGGTATCTGTTATTAATTTCTACTTTAATTTTGTTGAGGTCACAGAACATACCCAATATGATTTTAATCCTTCCAAATGTATTAAAATTTGTTTTATGGCTCATTATTTGGTTTGTCCTATTGAATATTCCAAATGTACTTGAAGAGAATGTTTATTCTGATGCTTTTTGGTGTAGCAATCTATAAATGTCAATTATATCAAGTTCATTGATAGTGTTGCTGAAGTCCTTAATAGCTTTACTGCTTTTTGGCATACTTGTTTTATAAGCCAGGGGTACTATTTAATACCTTTTTTTCATCTAATTTTTTTCCTTAAATTTACGCCATCTGATATTACTGTCCACTCCAACTTTCCCAACTAGTATTTATAATAGTATGTATTTTCCCATTCTTTTAGTTTCATTTTTTTAAATTTTTGCACATATTTGTAATTGTTATTTAAAATTTCTTATGTACTTATTTACTTACTTTTTGAAATGTGGTCTTGATAGGTTGCCCAGGCTTGAGTGCAGTGGCTATTAACAGGCATGATCACAGTGCACTGCAGTCTCTAACTCCTGGTCTCAAGTGATCC	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1779:HG4_PB_pbsv_16660:HG2_PB_HySA_30493:HG2_Ill_Krunchall_22428:HG4_PB_SVrefine2Falcon1Dovetail_10355:HG4_Ill_Spiral_1301:HG4_PB_assemblyticsfalcon_10464:HG2_PB_pbsv_16737:HG4_Ill_manta_3821:HG4_Ill_MetaSV_2030:HG4_Ill_GATKHCSBGrefine_11348:HG4_10X_allpass_3033:HG2_PB_assemblyticsfalcon_10670:HG2_PB_SVrefine2PB10Xhap12_12150:HG2_PB_SVrefine2Falcon1plusDovetail_4775:HG2_Ill_manta_4498:HG2_Ill_SpiralSDKrefine_6750:HG2_Ill_GATKHCSBGrefine_10983:HG2_10X_allpass_2584:HG2_10X_SVrefine210Xhap12_11576:HG4_Ill_Krunchall_22763:HG2_Ill_Krunchall_22427;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11576:HG2_10X_allpass_2584:HG2_Ill_GATKHCSBGrefine_10983:HG2_Ill_SpiralSDKrefine_6750:HG2_Ill_manta_4498:HG2_PB_SVrefine2Falcon1plusDovetail_4775:HG2_PB_SVrefine2PB10Xhap12_12150:HG2_PB_assemblyticsfalcon_10670:HG4_10X_allpass_3033:HG4_Ill_GATKHCSBGrefine_11348:HG4_Ill_MetaSV_2030:HG4_Ill_manta_3821;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00658979;ClusterMaxSizeDiff=0.00658979;ClusterMaxEditDist=0.00823723;PBcalls=8;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-607;DistBack=-69;DistForward=-608;DistMin=-608;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=17:37448148-37448757;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1481.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:34:16:./.:21:3:5:11:0|1:40:0:0:21:0/1:62:18:0/1:59:13:.:.:.
chr17	38377847	HG2_PB_SVrefine2PB10Xhap12_12154	GTTTAAGACGGAGTCTCGCTCTTTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCTGCCTGCCGGATTCAAGCGCTTCTCCTGCCTCAGTCCCCCAAGTAACTGGTACTATAGGCATGCACCACCACGCCCAGCTAATTTTTTGTATTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACTTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGTTGAGATTACAGGCATGAGCTACCACACCTGGCCGCATGTTTAGTTTTTTAACTCTTATTAATGTCAACTTTTAAAAGTAAAAATTTCATATTGTGTTACATTGGTTGCCATCAAGATGAAGATAGGGAAGTTAAGAGTTGGGGAAGGTGGAGATGAATGAAGTCAATTGATGAAGACTAGTAGAATGTAGTGTTGGTTTTTTTATTTGTTTATTTATTTAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11584:HG4_Ill_GATKHCSBGrefine_11354:HG3_Ill_GATKHCSBGrefine_10930:HG2_Ill_GATKHCSBGrefine_10987:HG3_PB_HySA_25255:HG3_Ill_manta_3676:HG4_Ill_Krunchall_22770:HG3_Ill_Krunchall_22002:HG2_Ill_Krunchall_22434:HG3_Ill_MetaSV_2102:HG2_Ill_MetaSV_1964:HG4_10X_allpass_3034:HG3_10X_allpass_3190:HG2_10X_allpass_2585:HG3_PB_pbsv_16396:HG2_PB_PB10Xdip_13213:HG4_PB_HySA_24396:HG2_PB_HySA_30503:HG2_PB_pbsv_16742:HG4_PB_pbsv_16665:HG2_Ill_tnscope_1782:HG4_PB_SVrefine2PBcRDovetail_8359:HG4_PB_SVrefine2Falcon1Dovetail_10358:HG4_Ill_SVrefine2DISCOVARDovetail_11695:HG3_PB_SVrefine2PBcRDovetail_8081:HG3_PB_SVrefine2Falcon1Dovetail_10332:HG3_Ill_SVrefine2DISCOVARDovetail_11926:HG2_PB_SVrefine2PBcRplusDovetail_4382:HG2_PB_SVrefine2PB10Xhap12_12154:HG2_PB_SVrefine2Falcon1plusDovetail_4777;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11584:HG4_PB_SVrefine2PBcRDovetail_8359:HG4_PB_SVrefine2Falcon1Dovetail_10358:HG4_Ill_SVrefine2DISCOVARDovetail_11695:HG3_PB_SVrefine2PBcRDovetail_8081:HG3_PB_SVrefine2Falcon1Dovetail_10332:HG3_Ill_SVrefine2DISCOVARDovetail_11926:HG2_PB_SVrefine2PBcRplusDovetail_4382:HG2_PB_SVrefine2PB10Xhap12_12154:HG2_PB_SVrefine2Falcon1plusDovetail_4777;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0803474;ClusterMaxSizeDiff=0.0803474;ClusterMaxEditDist=0.0960699;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-473;DistBack=-618;DistForward=-399;DistMin=-618;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=72;REFWIDENED=17:38377848-38378392;PctSeqSimilarity=0.9122;PctSizeSimilarity=1;PctRecOverlap=0.846;SizeDiff=0;StartDistance=-73;EndDistance=-73;GTMatch=0;TruScore=91;MatchId=1482.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:38:1/1:0:8:0:13:./.:14:4:1:2:0/1:9:32:0/1:17:5:.:.:.
chr17	39340795	HG3_Ill_Krunchall_22021	ACGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	A	20	PASS	ClusterIDs=HG4_PB_HySA_24403:HG3_PB_HySA_25264:HG2_PB_assemblyticsPBcR_10304:HG3_PB_pbsv_16410:HG2_PB_pbsv_16755:HG3_PB_HySA_25263:HG4_PB_pbsv_16675:HG4_Ill_GATKHC_26474:HG4_Ill_GATKHCSBGrefine_11362:HG4_Ill_250bpfermikitraw_21766:HG4_Ill_150bpfermikitraw_20956:HG3_Ill_Krunchall_22021:HG3_Ill_GATKHC_26353:HG3_Ill_GATKHCSBGrefine_10939:HG3_Ill_250bpfermikitraw_21456:HG3_Ill_150bpfermikitraw_20880:HG2_PB_assemblyticsfalcon_10695:HG2_Ill_SpiralSDKrefine_6757:HG2_Ill_Krunchall_22447:HG2_Ill_GATKHC_26513:HG2_Ill_GATKHCSBGrefine_10995:HG2_Ill_250bpfermikitraw_22109:HG2_Ill_150bpfermikitraw_20830;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20830:HG2_Ill_250bpfermikitraw_22109:HG2_Ill_GATKHCSBGrefine_10995:HG2_Ill_GATKHC_26513:HG2_Ill_Krunchall_22447:HG2_Ill_SpiralSDKrefine_6757:HG2_PB_assemblyticsfalcon_10695:HG3_Ill_150bpfermikitraw_20880:HG3_Ill_250bpfermikitraw_21456:HG3_Ill_GATKHCSBGrefine_10939:HG3_Ill_GATKHC_26353:HG3_Ill_Krunchall_22021:HG4_Ill_150bpfermikitraw_20956:HG4_Ill_250bpfermikitraw_21766:HG4_Ill_GATKHCSBGrefine_11362:HG4_Ill_GATKHC_26474;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0689655;ClusterMaxSizeDiff=0.0689655;ClusterMaxEditDist=0.102564;PBcalls=8;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-57;DistBack=16540;DistForward=5742;DistMin=5742;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=17:39340794-39340869;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:38:0|1:25:0:2:36:./.:0:11:12:1:0/1:23:15:./.:.:.:.:.:.
chr17	39392095	HG3_PB_assemblyticsfalcon_10674	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_16676:HG4_Ill_svaba_20641:HG4_Ill_Krunchall_22783:HG4_Ill_GATKHC_26477:HG4_Ill_GATKHCSBGrefine_11363:HG4_Ill_250bpfermikitraw_21769:HG4_Ill_150bpfermikitraw_20959:HG3_PB_assemblyticsfalcon_10674:HG3_Ill_svaba_20853:HG3_Ill_scalpel_15923:HG3_Ill_manta_3679:HG3_Ill_Krunchall_22023:HG3_Ill_GATKHC_26355:HG3_Ill_GATKHCSBGrefine_10940:HG3_Ill_FB_14225:HG3_Ill_250bpfermikitraw_21458:HG3_Ill_150bpfermikitraw_20882:HG2_Ill_svaba_20662:HG2_Ill_manta_4501:HG2_Ill_Krunchall_22450:HG2_Ill_GATKHC_26516:HG2_Ill_GATKHCSBGrefine_10996:HG2_Ill_250bpfermikitraw_22112:HG2_Ill_150bpfermikitraw_20833:HG2_PB_pbsv_16756:HG3_PB_pbsv_16411;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20833:HG2_Ill_250bpfermikitraw_22112:HG2_Ill_GATKHCSBGrefine_10996:HG2_Ill_GATKHC_26516:HG2_Ill_Krunchall_22450:HG2_Ill_manta_4501:HG2_Ill_svaba_20662:HG3_Ill_150bpfermikitraw_20882:HG3_Ill_250bpfermikitraw_21458:HG3_Ill_FB_14225:HG3_Ill_GATKHCSBGrefine_10940:HG3_Ill_GATKHC_26355:HG3_Ill_Krunchall_22023:HG3_Ill_manta_3679:HG3_Ill_scalpel_15923:HG3_Ill_svaba_20853:HG3_PB_assemblyticsfalcon_10674:HG4_Ill_150bpfermikitraw_20959:HG4_Ill_250bpfermikitraw_21769:HG4_Ill_GATKHCSBGrefine_11363:HG4_Ill_GATKHC_26477:HG4_Ill_Krunchall_22783:HG4_Ill_svaba_20641;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.169811;PBcalls=4;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=11;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=5525;DistForward=27326;DistMin=5525;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=17:39392094-39392167;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1485.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:23:0|1:13:3:2:18:./.:2:17:27:4:0/1:28:16:./.:.:.:.:.:.
chr17	39420771	HG3_PB_SVrefine2Falcon1Dovetail_10342	GAGACAGAGACAGAGAAATGGCAATGATTGTGCCAGTAACCTGGATTAGGGCTAGAGCCACAGCTCATATTGCTTTGCCTGGACCTCAAGCAGTAATGTCACAGTAATTCCCAGTCCCACATTCTCATGCTGGTAAGCCCCTCAGTCCCAGACAAATCAGGGTGAATGGTCACCGCAGCACGTAGATTGCTTGATGCTTTGTGAATTCCAGTGAACCCCTCCTCTTTCTACGTGTTTGCTTTGGCTCTGCTCTGCCACATAGCACACATTGTGCTGAACACCCTCTTCCCAAGAGGCTTTTATAGAACTGGAAGAGACAGGTAAAGTAGGTTGTACATAGAGAGATGCCTATCAGTCTTGAATCAGACTTTGGTGGGTGAACAGTCTTGGTCCCAAGCATGGATTCAATTCACCACTGTGAATATATCAACATCATGCTTCTCCCCACAGACACTTCCCAGTCTACATACAGCCAAAGGATGAGACTGGGCAGAGAGAACTTCCTGAGCCTCCCCAGTCACCAGGAACTATCACATGACGAGATGCTGGTCAGAGCAGGAACGAAGCTGATGATGAGACTGCCTTCCTTTTATCTGAAACAAAGTTTCTACGAGTAATTTACAATTAAGAAACAGATTAAACCCTTACTTTCCAAAGATTCATAACATTTAGGAAATGACTTCCTCTTTGACAATGCCAAACTGACTATGGAAAACAACTGTAAACAGCAAGAAAGAAAAATCCTGCTGATTGGTGGAAACTTTGGAGGCCACATGTATAAAAGGTCCAGATTGCAAGGGGTCATCAAATCCTGGGAAACTCACCTCTGAACAGAAGCCCACCCTCCACCCCTGACAACATGACCCACTGTTGCTCCCCTGGCTGTCAGCCTACCTGCTGCAGGACCACTTGCTGCAGGACTACCTGCTGGCAGCCCACCATTGTGACCACCTGCAGCAGCACACCCTGCTGCCAGCCCTCCTGCTGTGTGTCCAGCTGCTGCCAGCCTTACTGCCACCCAACTTGCTGTCAAAACACCTGCTGCAGGACCACCTGCTGCCAGCCCACCTGTGTGACCAGCTGCTGCCAGCCTTCCTGCTGCAGCACACCCTGCTACCAGCCCATCTGCTGTGGGTCCAGCTGCTGTGGCCAAACCAGCTGTGGGTCCAGCTGTGGCCAGAGCAGCTCCTGTGCACCTGTGTACTGCAGAAGAACCTGCTACCACCCCACGACTGTCTGCCTGCCTGGTTGCCTCAACCAGAGCTGTGGATCCAGCTGCTGCCAGCCCTGCTACTGCCCAGCCTGCTGTGTGTCCAGCTGCTGCCAGCATTCTTGTTGCTGAGCAGCACCACAGAGGACCATCATCCTCACACAACAACCTTCTGCTCAACTGACCTTTTTTTTCTTTTGAGACGGAGCCTCACTGTCACCCAGGCTGGAGTGCAGTAGCACGCTCTCGGCTCGCTGCAACCTCCATCTTCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACATGCCTGTGCCACCACGCCTGGCTAATTTTTTGTATTTTTAGTATTTTTAGTAGTTTTCACCATGTTGATCAGACTTGTCTGGAACTCCTGCCCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCTACCACACCCAGACCCAACTCACTTATCTTTCAGAAGACAGATTTACTTTCAAACTTTACTGATACACAGTATGCTTTCACCAATTTTTTTTATTTCTTTGCCTGTTTAAAATCTTGGGAATCAGCTTGAGGGAGGGCAGAATACTTCATCCTGATTCTTTTTTCCTTACACTTTGTGGATCATGTGCCAGCTTCATGTGTTCTCAATGTGGAGACATGGTCTCCATTCGACTCTAAAGTCAAGAGCTTCATTCTCTCCTTCTAAGAAACTTAGGTTTCTGCAACTGATCAATAATCTTTGCAATCATATTTTTGTTTTCAATTTTGTCCTCATGTTTCTTTTACCCTTCTTTCTTCTTTTCATTGTAACTTTGGGCTATGTCCCTAGTAGCAGGGATTCTTACCTATATATTTCTGAATAAATTCTGAACCATCCTTCATCTCATATGGTGTTTTATTTTACAGAATTGCTGATATGAGATTTACACACATATTGCATGCTATATGTATTATCCAATTTGATTCTGAAAACAGAGTTATTATTATGTATTATTACCTCAATTTTTCAGCTGAGAACAATTTAGTGTGTGATTTTATGTAGCTAATAAAGGACAGACTCTAGTCCAAGGTGAGAGCTTCTCTTTCTGCCCAAGAACACTTACATTTAACTCTCGGTAAAGTAGAAATGATATTGAGACTCAGCAATAGCAAGACATGCACTTGAGTTTATTTAATGTGGGAGGTATAATCTCTCATATTTGCAGACGACATTTCTGTTCACAAAGGTCTTCCCAAATTAGTTTTCCACACCTCAGTGAGTAATAGCTACATGGGATGACAACAGGGACGGCATTTAATAGCTGCCCTGAGTGAGGATCCCTTTTTGTCTCAGTCTTTGACCAGCTATTTATTCAATTAATCTGCATCAGAAAATTTTGAGAATGCATTGTGTCCTCATGAGAGAGGATCTCATTTGGGGATTTTTTTCCTGGTATCACGTAAATAATATTCTTATATGGCTTCCTTCTCCTGAATACCTGTTGACAAAGCAAAAAGAATTTAAGTTATTCCTTCTAAAATATGGACCATACATTAAGCCACATTAAGTCAAATTGTCCCTCAAATCAAAATGTTATTAGGAAAATTAAGTGAAACAAATTTGGGGATTGAGGGACTATGCAATGGGCATGTATGACTTTGTACAAACCATAAAGGTATAAAACAACCTTCTGAGTTTTGTGAGGCAAATAGGAAGCATCTCAAGAAACCAAAAACCTGTGTTTCCAGGGAAATCAGAAGAATTTAAGAAGGAGGAAACGTGGAAGAACTTTCTCATTCATGGAAGTCATGATAGATGGAAAACTGGCGCTTTTGTTCCTGAACTGATGATGCAACTGAAGTATTCAGTCATGGAGGGATTCATTGATACTGGCCCTGAGAGAATTAGAAAAGTTAGGGACCTGGGCCACCTTCTTGGGACCTCCTACCGGCATGGGAGTGGTAGAAATACCTCTGAGGAGCTAACAATGTAGGTTTCCAGGACAGATACCAGCTTCTGAGGTGGTGTATCTAGAATGCTCAGAAGACTCAGCTAAGGGACAAAAGCCACTGACTGTGATAGTTGTTGCATAATGGGGTAAAGAAACTGAAGAACTATCACATTCTCTTTGACCAACATCGGTTATGCAAGATGAGTCAGTTCTGCAGATCTAGTGTACAGCAACGTGACTATAGTTAACAAAAATGCTTTATTTTATACCTGAAATGTGCTAAGAAGGTAGATCTGGAGTGTTGCTAAGAAGGTAGATCTGAAGTGTTTACACCACAAAAATAAAAAGGAAATGGTAACTATGTGAGCTAAGGAATATATGATAATTCACAATAAGTATATACATATCTCAAAACATCACCTCGTACACATTAAATATACACAATTTTATTTTTATTTATCAATTATGCCTCAATAAAGCTAGTAAAGAAAGAAGTGAGTTGATCTGGTTAATTATTATTCATGTATTCTTATCTTCAACATTAAAATTAGGAGTTCTCTGGACAAAAAAAAAACTAATATGTCCTAGGTTGCCTACTATTTAATGGGTATTGATTAAATGCTTTATGAACATTATCATTAATTCTTGAAGAAACATTCAAAGTAGGTATTAATGTTCCCATTGTAGAGATGAGAAAATTGAGTCTGAGAGAGGAAATGTAATATCAGAGTTTGGTTTTCCCATAACAAACTCCAAGAAAAATATTCCAGTGAAAGTAGTTTATTGGAAAGTGCAGATCACACCAGCAGGTATTGGAGAAGTGACACAGAAAAGGGTAGACTATTAAACTAGTATCACAGTGACCAATTAAAGCTTAAACCAAACAAAACACTATTAGAAATAATGAAAAACAAACAAATTAGAATTATCCTACTTCAGGAATGAGGAAGCTAGAGTCTTCACAAACCAGTGCTCTGGAATCATTGGTTGAGTGTTTTTCTCTGTGTGGCACGCACAGGCGACATGACTTTCTGCAGTAACAATACAAGAGCCCATAGGCACACAGATGCAGATTTGGGCAAATGCATATTGGTCTGAGCATACTAAGATCCAAGATATAGGAATGGGATAAGGAAATCCTATCTACAATCTACCATTTGCTCCACACAGACCCAATCTTTGCTTCTTAAGTGTGGTGGGCAGCCACAAACTCTAGAAGAAGGAAGAGGAGGAGGAAAGGAAGAGGAGAAAGAGGAAAAACAGAAAATGAGAGGAAGAAGAAAGATGGAAAAATGAAAGAAAGAGAGAAGAAAGGAAGGAAGGAAAGAAGGGGGGAAGGAAGAAAGGAGGGAAGGAGAGAGGGAAGGAAGAAGGAAAGGAGGGATGGAAGGAAGAAAGGAAGGAGGAAAGAAAGAAAGAAAGAGAGAGAGAGAAGGAAGGCAGGAAGGAGAGAGAGAAAAAGAAGAAAGAGAAAGAAAGAAAGAAAAAGAAAAAGAAAGAAAGAAAGAGAAAGAGAGAGAGGGAGGGAGGGAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAGAAATTAAGAAGCAAAGAAAGGAGGGGGAGAGATATGTAAAATGAAGGCCAATGGAACAAGCAACAGTTACTGCTGCTATAATAGGGTGCACCTGACAGCCATAATCTCCATTAATTATCAAAAGTCTATAGTTCCTTCACCACTTTCCAGAACTTTTACTACTCTAGATAATTTCCGGAAGGAGTAACCCAGATGTTCCTGCCCAAAGGGTCTGAGCCACTAGTTACTGTACCACTGTCCACTGTGATTGCTGTTTTCACTCACTTGTGGTTATCTCTGGGCATGGACACAGTATGAGATTCTCCAGTGTTATGGGTTGAATGAGTCCCCCAAAATTCATATTGAAATGAGGTCATTGAAAACATAATTAGTTAAGATCAGGTCATATTGGAACAAGTTAGGCCCCTGATTCAATAGGACTGATGCCTGTATAGAATGGGGAAGTTCAGACGCCATGTGCATCTAGAAGGAAGATCATGTAAGAGACATATGGAGAAGACAGGCATTTACAAGTCAAGGAGAGACACCTGGAAGAGATGCTTTCCTAACAGTCCTCAGGTAAAAACAACCTTGTCAACACCTTAAATTCAGACTACTAGCCTTCAGAACTGTGAGAAAATAAATTTCAGCCACTTGGTTTGTAGTGGTTTATCATGGCAGTGCTAGTAAATTAACATATTCAGTAAATCTCCTGAGCTACAGATACATTCTCCTACATTCTACGCCTTCAGGATAATTACCCCTCACCAACTCTGTTCTCTGCCTTCTAATCTGCTGACATGAAGAGTGCAAAATGACTAGGCGGTAATTATTACTTGCGATTATGCGAAAGAAATAGAGAAATAAATTTTGTAATTTTTATTCACACAGAAGTAAAAAAGGAAAAGCCAAATTGACCTACAGGGTTACAACTTGATAGAGTGATTAGCGGTTTTGGGGGATGAGTAAGGAAATATAACTGAAAGGGAATGGGATTAATTTCTATTTCCTAACCTGGTAATGGGAACACAGATGTATTTACAGTTATATCAAGTTGGAAATTAATAATTTGCATTCTTCCAAAATGAATGGTATACCTAAAAAATGTTTAAATATGTTGGAACTCCAAGACAAATCAGGTATCATCTCAACTCATCTAATTCCTTCATTAAAAAGAAATAGACAGAGAGAGAAGAAATGGCCCTGATTGTGTTAGTACCAGAGTTAGGGCTAGAGCTACAGCTCATGCAGGTTTGCCTGAATCTAAAGTAGTTATGTTACAGAAAGTCCCACATTCTCATCCTGGTAAGTCCCTCACTCCCAGACAAATCAAGATGAATGGTCACCCCAGGGCAAAGATTGCCTGATGTTATCTAAATCACACTGGACTTCTCTTTGTACCCACCTGCTTTGGTTCTCTCTGACACATAAAACACATTGTACCAATCACCCTCTTCCCAAGTGACTTTGATGGAGCTGAAAGACACAGGTGGTGTGGGTTGTACAGAGAGCAATGCCTGTTAGTCTTGAATCAGACTTTGGTGGCTGAACAATCTAGGCCACAGATATGAATTCATTTAGTCATTGTGAACACATCAGCATCACGCTTCCCGCAACAGACACTTCCCAATCTACATACAACCAAAGAAGGAGGCTGGGTAGAGAGAACTTCCTGAGCCTAACCGGTCACCAGGAACTATCACATAATCAGAAGATGGTCACATCAGGAACGATGCAGATGTTGAGAGGGGCTTCCTTTTATCGAAAATAAACTTTCTATGAGTAAACTACAATTAAGCAACAGAAAATAACAGAAAACTAAGAAATTAAGCAACAGAAAATTAAATAATTTTCTTCTGAAAATTACTTTCAAAAGATTCATAACCTTTAGGAAACAACGTCCCCTTTGACAATACCACAATGACTGTGGAAAACAATGTAAACAGCAACAAGGAAAAGTCCTGCTGTTTGGTGGAAACTTTGGAGGCCAGGTGTATAAAAGGTCCAGATTGCAAGGGGTCATCAGATTCTGGGAAACTCACCTCTGAACAGAAACCCACCCTCCACCCCTGACACCATGACCCACTGCTGTTCCCCTTGCTGTCAGCCTACATGCTGCAGGACCACCTGCTGCAGGACAACCTGCTGGAAGCCCACCACTGTGACCACCTGCAGCAGCACATCCTGCTGCCAGCCCTCCTGCTGTGTGTCCAGCTGCTGCCAGCCTTGCTGCCACCCAACTTGCTGTCAAAACACCTGCTGCAGGACCACCTGCTGCCAGCCCACCTGTGTGACCAGCTGCTGCCAGCCTTCCTGCTGCAGCACACCCTGCTAACAGCCCACCTGCTGTGGGTCCAGCTGCTGTGGCCAAATCATCTGTGGGTCCAGCTGCTGCCAGCCCAGCTCCTGTGCACCCATCTACTGCAGGAGAACCTGCTACCACCCCACGAGTGTCTGCCTGCCTGGTTGCCTAAATCAGAGCTGTGGCTCCAGCTGCTGCCAGCCCTGCTGCCGCCCAGCCTGCTGTGAGACCACCTGCTGCAGGACCACTTGCTTCCAGCCCACTTCTGTGATCAGCTGCTGTCAGCCTTCTTGCTGCTGACCAACTCTCCAGAGGACCACCATCCTCACACAGCAACCTTCTGGCAACCTTCTGTCCTCCTCTTGGAGGACAAATTTACTTTCAAACTTTGCTGACAACCAGCATGCTCACCCTAATTTTTATGACTTCTCTGCATGTTTAACATCTTGTGAATCAGCTTGAGGGAGGGCAGAGTACTTCATCCTGATTCTTTTTTTCTTTATACCTTGTAGATCATGTGCCAGCCTCATGTATTTTCAATTTGAGTCATGGTCTCAGCTTGACTCTAAAGTCAAGAGCTTCATTCTCTTTCTCCAAGAAGCTTAGGTTTTGCAACTCATCAATGATCTTCACAATCATGTTTTCATTTTCAATGTCCTCCTCGTGTTTCTTGTATCCTTCTTTTCATGATCATTTTGGGCTATCTCCCTAGAAACAGGGACCATTACATATATGTTTCTTAATAAACTCAAAACCATTCTTCTTATCACATGGTGTTTTTTTTTATTTTACAGCATTCCTGATATGGGATTTACACACATATTGCATACCATGTATGTTACCTAATTTGATTATCAAAACAGACAGTCATGTTTTATTACCTCCACTTTCCAGCTGAAAAAATTTTAATGTGTGATGTTATTTAGCTAAAAATGGACAGACTCAGATGCAAAGTTGGGTCTTTTTTTCTGTCCAAAGGCACTTACATTTAACTCTCAATAAAGAAAAAACTATATTGGGACTCAGCATTAGCAAGATATGCACTTAAGTTTACTTAACAATGGAGGAATAATCTCCTGTATTTGCAGATAACATTTCCATTCTTATATGGCTTCCTTCTTCTTCTCCTGAATACATATTGACAAGGCAAAATGAACTTAAATTATTCCTTATAAAATACAGATGCCATCTTTTGAGACTGTATATCTGGGATGCTGTGAAGATTCCAGAGAGAGAGAAAAGCCGCTGACTGGGATAGTCGTTGGGTGATGGGGTAAAGGAGACGAAGAACTAGCACATTCTCTTTGACCTACATCAGTTATATAAGACAAATAAGTTTTGCAGATCTGGTGTACACTAATTTGGATATAGTTTAAAATACTTTTTTGTACACCTGAAATTTGCTGAGAAAGTGGATCTTAAATATTCCCACCACAAAAATAAAAAGGAAATGGTAACTATGTGAGCTAATAAATATGTGATTATTTCACAATGAATATATATATCAAAACATAACCTTTTATACCTTACATATACACAATTTTTATTTGTTAATTATACCTCAAAAAAGCTAGTAAAGAAAGAATTTAGTTGATCTGGTTAGTTATTATACATATATTATCTTCAAAATTAAAATTATTTTTTAAGTTTTCTGGACAAAAAAAGAACTAATATGTTCTGGGTTGACTTCTATTTGATAGGTAGTGACTAAATGCTTTATTTTCATTAATATTTATTCTCAAAGAAATGTTCAAAGTAAGTATTAATGTTACCATTGTAGAGAGGAGGAAATTGAGGCTGAGAGAGTTAATGTAATATCATAGTGTGGTTTCTCCCAGAACAGATACCAAGAAAAATACTCCAGTGAAAGTAGTTTATTGGGAAGTGCAGATCACACCGGTAGGGATCAGGAAAGTGACACAGAAGAGGGTACACTATTGAGCTGGTAAGTATCACAGTGACTAACTAAAGCTTAAACCAAAGGGAAAACTATTAGAAATGATGAAAAACACATAAATTAGAATTCTCCAACTTCAGGAATAAAGGAGCTAGAGTCTTTGTAAATCAGCTCCCCAGAATCAATGGTCGAGTGTTTTTCGCTCTGTGGCATGCAGAAGTGACATGACTTTCTGCAGGTACAATACAAGAGCCTTTAGGCACAGAGATGCAGATTCTGGAAGATAGAAACTGGCCTGAGCACACTAAAATCCAAAATATATGGATGGGATAATGAAAACGTTATCTATGATCTGCCATTTGCTCTACTCAGATTTATTCTTTGCTTCTTAACTGTGATGGATAGCCAGAAATTCTAGGAAAAGGAGGGAGGGGAGGAGAGGAAGAAAATGGACAGAAAGGTCTGAGCTGCTAGTTACTGTACCATTGTCCACTGCGATTGCTGTTTTCACTCATTTGTGGTTATCACTGGGCATGGACACACTATGAGATTCTCCAATATTATGGCTTGACTTGTGTCCCCCAAAATTCATATTCAAATAGGGATATTGAAACTGTAATTACTTAAGATCCAGTCATATTGGAATCAGGCTTCTGATTCAATATTACTGATGCCTGTATAGAATGGGTAAGTTCAGAGGCAGTGTGCATCTAGAAGGATGGTCATGTTAGAGACACATGGAGAAGACAGACATCCACACTTCAAGGAGAGAGACCTGGAACAGATGCTTTCCTAACAGTCCTCAGGTGAAAACAACCTTGGCAACACCTTAAATCCAGACTGCTAGCCTTCAGAACTGCAAGAATATAAATTTAAGCCACTTGGTTTGTAGTGGTTTATCACAGCAGTGCTAGTAAATTAGTATGTTCAGTAAATCTCCTGAGCTACAGATACATTCTCCTACATGCCATGAAAACAGGATAATTACCCCTCACCAAAAAGGAACTCTTTTCTCTGCCTTCTGATCTGCTGACATGAAGAGTGCAAAATGACTAGGCAATAATTATTACCTCTGATTATGCAAAAGAAATAGAGAAGCAAATATTATAATTTTTATTCACACGAAGTAAAAAAGGAATAGCCAAATTGACCTACAGGGTTGCAACTTGATAGAGTGATTAGTGGTTTTTTGGGATGAGTAAAGGAATATAATTTAAAGGGAATGGGATTAATTTCTATTTCCTAACCTGGTAATGGGGACATAGCTTTATTTACAAAGTTATAACAAGTTGGAAATTAATAATTTGCATTCTTCTGAAATGAATGGTATACCTAAAAAATGTTTTAATATGTTAGAACTCCAAGACGAATCAGCTATCATCTCAACTCATCTAATTTCTTCATTAAAAAGAAATGGAGAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11592:HG3_PB_pbsv_16413:HG2_PB_pbsv_16758:HG4_PB_pbsv_16677:HG2_10X_allpass_2587:HG4_10X_allpass_3035:HG3_10X_allpass_3192:HG3_PB_HySA_25265:HG2_Ill_MetaSV_1971:HG3_PB_pbsv_16412:HG2_PB_pbsv_16757:HG4_PB_SVrefine2PBcRDovetail_8366:HG4_PB_SVrefine2Falcon1Dovetail_10369:HG3_PB_SVrefine2PBcRDovetail_8090:HG3_PB_SVrefine2Falcon1Dovetail_10342:HG3_Ill_SVrefine2DISCOVARDovetail_11936:HG2_PB_SVrefine2PBcRplusDovetail_4392:HG2_PB_SVrefine2PB10Xhap12_12164:HG2_PB_SVrefine2Falcon1plusDovetail_4790;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11592:HG4_PB_SVrefine2PBcRDovetail_8366:HG4_PB_SVrefine2Falcon1Dovetail_10369:HG3_PB_SVrefine2PBcRDovetail_8090:HG3_PB_SVrefine2Falcon1Dovetail_10342:HG3_Ill_SVrefine2DISCOVARDovetail_11936:HG2_PB_SVrefine2PBcRplusDovetail_4392:HG2_PB_SVrefine2PB10Xhap12_12164:HG2_PB_SVrefine2Falcon1plusDovetail_4790;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00697472;ClusterMaxSizeDiff=0.00697472;ClusterMaxEditDist=0.0215521;PBcalls=13;Illcalls=2;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-10334;DistBack=1296;DistForward=-9393;DistMin=-9393;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1294;REFWIDENED=17:39420772-39432399;PctSeqSimilarity=0.9089;PctSizeSimilarity=0.9972;PctRecOverlap=0.909;SizeDiff=29;StartDistance=-941;EndDistance=-912;GTMatch=0;TruScore=93;MatchId=1486.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:60:50:0|1:50:1:6:32:0/0:37:0:54:0:0/0:77:0:0/1:493:188:10373:.:.
chr17	41119184	HG3_Ill_manta_3681	TTATATAATATATAATATAATATATAAAATATATATTATATAATATATAATATAATATATAAAATATATATTATATAATATATAATATAATATATAAAATATATATTATATAATATATAATATAATATATAAAATATATATTATATAATATATAATATAATATATAAAATATATATTATATAA	T	20	PASS	ClusterIDs=HG2_PB_HySA_30526:HG3_Ill_Krunchall_22038:HG2_Ill_Krunchall_22464:HG4_Ill_250bpfermikitraw_21780:HG4_Ill_150bpfermikitraw_20976:HG4_10X_allpass_3038:HG3_Ill_manta_3681:HG3_Ill_GATKHCSBGrefine_10945:HG2_Ill_SpiralSDKrefine_6769:HG4_PB_HySA_24418;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SpiralSDKrefine_6769:HG3_Ill_GATKHCSBGrefine_10945:HG3_Ill_manta_3681:HG4_10X_allpass_3038:HG4_Ill_150bpfermikitraw_20976:HG4_Ill_250bpfermikitraw_21780;NumExactMatchSVs=6;ClusterMaxShiftDist=0.23301;ClusterMaxSizeDiff=0.23301;ClusterMaxEditDist=0.23301;PBcalls=2;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-182;DistBack=-22;DistForward=144;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6906;REFWIDENED=17:41112516-41129218;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1488.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:33:./.:1:7:4:12:./.:2:0:0:0:1/1:0:46:./.:.:.:.:.:.
chr17	41516944	HG2_PB_SVrefine2Falcon1plusDovetail_4800	TGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGGGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCTGGGCGTGGTGGTGGGCGCCTGTAGTCGCAGCTACTCGGGAGGATGAGGCAGGAGAATGGCTTGAAAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGACTGAGCCACTGCACTCCAGCTTAGGCGACAGAGCCAGACTCCACCTCAAAAAAAAAAAAAAAAAAAAAAAAGTTTACCCTACTTTCAAGCCAACGAGTTATTTTTTTGTTTATTATTATTATTTTATTTATTTATTTGCTTTTTGCAGAGGCTCTTTCCTGGTCCTTGATGGTCCCCTTTGTGTGGACTGTGGACATCATGATTGTTGGAATGCAGATTCCATGGCCCTACACCGGATCCCTGGTAGGCTGGGAATCTGCATTTTGACAAGCTTGCCTAGGTGATTTCATAAACTCTAAGGCAGTGGGTCCTAAACCTAGGTGAGCCTCATAATTAATTGGAGGGTGTTAAAAACTATAGATCATCAAGCCCTGGTCCCTGGAGATCCCGATTCCACAGGCCAGAATCTGTGGAAGAGTTCTTGCAAGGGACTCATGGAAGCAGCCAGGTCTAGGAATTACTACCTTAAGGAAATTACTGGAGGTGAAATATTCAGACTCTCTTATTCATTCTACAAGACCTAGAGCAGAAGAGGCCAGAAGGGGGCCGGAGGTGCCAGGATCCTTTCTGGGGCTGCCTTTGTGTTTATCTTTGGACCTGGGCTGATTGCTTGGAACCAGGCAAGCAGTAACTACAGAGTTTAGAAGCACTTTGGATCAGCCCCTCATTTGCTTGTGGGAGGGAATTGCAACCGCAGACACTCGTTTCATCACTGAGCATGTCTGAGCTGGGGGAGGATATGGGGTGGGATGGCAAGGGCATTGGACTAAGCAGGCCTAAAATATTTTGGGTTTTTTTGTTGTTGTTGTTGTTGTTTGAGATGGGGGTCTTGCTATGTTGCCCAGGCTGGTTTCAAACTCCTGTGCTCAAATGATCTGGCCTCAGACGCCTGAGTAGCTGAGACTGCAGGTGCACACCACTGTGCCCGGCTAGAAAATGTTTACTCTAAGTTTAGTCAATTCTGTCAACTTGAGCAACTTTACCTAATGTCTCTGATCTTCAGAGTTTTTATTCGTAAAATGAATATAACTCTCATTGTAAACATTATATAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11611:HG3_PB_SVrefine2Falcon1Dovetail_10354:HG3_PB_assemblyticsfalcon_10697:HG2_10X_allpass_2589:HG3_10X_allpass_3194:HG3_PB_pbsv_16431:HG2_PB_pbsv_16772:HG2_PB_HySA_30535:HG2_Ill_tnscope_1785:HG3_Ill_MetaSV_2113:HG2_Ill_MetaSV_1975:HG2_Ill_GATKHCSBGrefine_11006:HG4_PB_SVrefine2Falcon1Dovetail_10382:HG3_PB_SVrefine2PBcRDovetail_8102:HG3_Ill_SVrefine2DISCOVARDovetail_11946:HG2_PB_SVrefine2PBcRplusDovetail_4404:HG2_PB_SVrefine2PB10Xhap12_12175:HG2_PB_SVrefine2Falcon1plusDovetail_4800:HG2_Ill_SVrefine2DISCOVARplusDovetail_5151;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11611:HG4_PB_SVrefine2Falcon1Dovetail_10382:HG3_PB_SVrefine2PBcRDovetail_8102:HG3_Ill_SVrefine2DISCOVARDovetail_11946:HG2_PB_SVrefine2PBcRplusDovetail_4404:HG2_PB_SVrefine2PB10Xhap12_12175:HG2_PB_SVrefine2Falcon1plusDovetail_4800:HG2_Ill_SVrefine2DISCOVARplusDovetail_5151;NumExactMatchSVs=8;ClusterMaxShiftDist=0.105092;ClusterMaxSizeDiff=0.103462;ClusterMaxEditDist=0.119756;PBcalls=10;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-1288;DistBack=25926;DistForward=-1253;DistMin=-1253;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=295;REFWIDENED=17:41516945-41518527;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0.9938;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=99;MatchId=1489.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:39:0|1:16:3:5:24:0|1:70:0:2:24:0/1:46:24:0/1:101:56:1491:.:.
chr17	46419774	HG3_Ill_svaba_20912	TTTCTATATTCTTCTAGCACTCTTTGTAGTTTTCACAAAGTCATGACCTAAACACAATATGCAGCATGC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_20889:HG2_PB_HySA_30575:HG3_PB_pbsv_16470:HG2_PB_pbsv_16811:HG3_Ill_GATKHC_26435:HG3_Ill_GATKHCSBGrefine_10978:HG2_Ill_GATKHC_26590:HG2_Ill_GATKHCSBGrefine_11038:HG2_Ill_SpiralSDKrefine_6807:HG3_Ill_manta_3688:HG2_Ill_manta_4514:HG3_Ill_Spiral_17169:HG2_Ill_Spiral_1095:HG2_PB_assemblyticsPBcR_10387:HG3_Ill_svaba_20912:HG3_Ill_Krunchall_22089:HG3_Ill_250bpfermikitraw_21521:HG3_Ill_150bpfermikitraw_20949:HG2_Ill_svaba_20714:HG2_Ill_Krunchall_22517:HG2_Ill_250bpfermikitraw_22171;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20889:HG3_Ill_svaba_20912:HG3_Ill_Krunchall_22089:HG3_Ill_250bpfermikitraw_21521:HG3_Ill_150bpfermikitraw_20949:HG2_Ill_svaba_20714:HG2_Ill_Krunchall_22517:HG2_Ill_250bpfermikitraw_22171;NumExactMatchSVs=8;ClusterMaxShiftDist=0.170543;ClusterMaxSizeDiff=0.170543;ClusterMaxEditDist=0.190476;PBcalls=4;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-68;DistBack=76901;DistForward=23966;DistMin=23966;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=67;REFWIDENED=17:46419775-46419909;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1490.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:43:0|1:44:2:1:37:0|1:25:1:0:12:0/1:39:21:./.:.:.:.:.:.
chr17	47228439	HG2_Ill_SVrefine2DISCOVARplusDovetail_5179	CAAAAAGCTAATCTTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11639:HG2_Ill_Krunchall_22524:HG4_PB_assemblyticsfalcon_10555:HG3_PB_assemblyticsfalcon_10751:HG2_PB_assemblyticsPBcR_10397:HG4_Ill_Spiral_1307:HG3_Ill_Spiral_17179:HG2_Ill_Spiral_1096:HG4_PB_HySA_24460:HG4_PB_pbsv_16724:HG4_Ill_MetaSV_2050:HG3_PB_HySA_25321:HG3_Ill_MetaSV_2129:HG2_Ill_tnscope_1792:HG2_Ill_MetaSV_1988:HG4_PB_SVrefine2PBcRDovetail_8391:HG4_PB_SVrefine2Falcon1Dovetail_10404:HG4_Ill_scalpel_15295:HG4_Ill_manta_3825:HG4_Ill_SVrefine2DISCOVARDovetail_11734:HG4_Ill_GATKHCSBGrefine_11387:HG4_10X_allpass_3039:HG3_PB_pbsv_16475:HG3_PB_SVrefine2PBcRDovetail_8125:HG3_PB_SVrefine2Falcon1Dovetail_10379:HG3_Ill_scalpel_15978:HG3_Ill_manta_3689:HG3_Ill_SVrefine2DISCOVARDovetail_11972:HG3_Ill_GATKHCSBGrefine_10980:HG3_10X_allpass_3202:HG2_PB_pbsv_16818:HG2_PB_SVrefine2PBcRplusDovetail_4428:HG2_PB_SVrefine2PB10Xhap12_12207:HG2_PB_SVrefine2Falcon2Bionano_8263:HG2_Ill_scalpel_15663:HG2_Ill_manta_4516:HG2_Ill_breakscan11_2406:HG2_Ill_SVrefine2DISCOVARplusDovetail_5179:HG2_Ill_GATKHCSBGrefine_11042:HG2_10X_allpass_2596;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11639:HG4_PB_SVrefine2PBcRDovetail_8391:HG4_PB_SVrefine2Falcon1Dovetail_10404:HG4_Ill_scalpel_15295:HG4_Ill_manta_3825:HG4_Ill_SVrefine2DISCOVARDovetail_11734:HG4_Ill_GATKHCSBGrefine_11387:HG4_10X_allpass_3039:HG3_PB_pbsv_16475:HG3_PB_SVrefine2PBcRDovetail_8125:HG3_PB_SVrefine2Falcon1Dovetail_10379:HG3_Ill_scalpel_15978:HG3_Ill_manta_3689:HG3_Ill_SVrefine2DISCOVARDovetail_11972:HG3_Ill_GATKHCSBGrefine_10980:HG3_10X_allpass_3202:HG2_PB_pbsv_16818:HG2_PB_SVrefine2PBcRplusDovetail_4428:HG2_PB_SVrefine2PB10Xhap12_12207:HG2_PB_SVrefine2Falcon2Bionano_8263:HG2_Ill_scalpel_15663:HG2_Ill_manta_4516:HG2_Ill_breakscan11_2406:HG2_Ill_SVrefine2DISCOVARplusDovetail_5179:HG2_Ill_GATKHCSBGrefine_11042:HG2_10X_allpass_2596;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0830769;ClusterMaxSizeDiff=0.0830769;ClusterMaxEditDist=0.0830769;PBcalls=15;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=860;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=353;REFWIDENED=17:47228440-47229122;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1491.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:50:1/1:0:14:0:18:1/1:0:29:0:13:1/1:0:30:0/1:3:10:.:.:.
chr17	49274402	HG2_Ill_manta_4518	GATATATATATATATATATATATATATATATATATATATATATATATATATATAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11654:HG4_Ill_Krunchall_22855:HG4_Ill_GATKHC_26564:HG4_Ill_GATKHCSBGrefine_11395:HG4_Ill_250bpfermikitraw_21838:HG4_Ill_150bpfermikitraw_21031:HG2_PB_pbsv_16829:HG2_Ill_scalpel_15681:HG2_Ill_manta_4518:HG2_Ill_SpiralSDKrefine_6826:HG2_Ill_Krunchall_22547:HG2_Ill_GATKHCSBGrefine_11047:HG2_Ill_250bpfermikitraw_22194:HG2_Ill_150bpfermikitraw_20910:HG4_PB_HySA_24479:HG4_PB_pbsv_16735:HG4_PB_SVrefine2PBcRDovetail_8399:HG4_Ill_SVrefine2DISCOVARDovetail_11743:HG2_PB_SVrefine2Falcon1plusDovetail_4836:HG2_Ill_SVrefine2DISCOVARplusDovetail_5193;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20910:HG2_Ill_250bpfermikitraw_22194:HG2_Ill_GATKHCSBGrefine_11047:HG2_Ill_Krunchall_22547:HG2_Ill_SpiralSDKrefine_6826:HG2_Ill_manta_4518:HG2_Ill_scalpel_15681:HG2_PB_pbsv_16829;NumExactMatchSVs=8;ClusterMaxShiftDist=0.145455;ClusterMaxSizeDiff=0.145455;ClusterMaxEditDist=0.18018;PBcalls=5;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-54;DistBack=2474;DistForward=-34;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=44;REFWIDENED=17:49274381-49274478;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1492.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:22:0|1:32:4:1:16:./.:4:17:6:0:0/1:14:31:./.:.:.:.:.:.
chr17	49492709	HG2_10X_allpass_2598	TATATATATATATATATATATATAATATATATATATATATATATATATATATATATAATATATATA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_16830:HG4_Ill_GATKHCSBGrefine_11397:HG4_Ill_GATKHCSBGrefine_11396:HG2_10X_allpass_2598:HG4_10X_allpass_3040:HG4_PB_HySA_24481:HG4_PB_pbsv_16736;NumClusterSVs=7;ExactMatchIDs=HG2_10X_allpass_2598;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0763359;ClusterMaxSizeDiff=0.0763359;ClusterMaxEditDist=0.0763359;PBcalls=3;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-65;DistBack=76662;DistForward=3862;DistMin=3862;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=17:49492708-49492775;PctSeqSimilarity=0.9812;PctSizeSimilarity=1;PctRecOverlap=0.5606;SizeDiff=0;StartDistance=29;EndDistance=29;GTMatch=0;TruScore=84;MatchId=1493.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:28:0|1:45:2:2:26:./.:1:3:2:0:./.:12:1:./.:.:.:.:.:.
chr17	50787986	HG3_Ill_GATKHCSBGrefine_10990	GTGGGAACATTCCACAAGAGGACCTGCCTATAGAGAGGCAGGTGGGAACATTCCTCAAGAGGACCTGCCTACAGAGAGGCAGC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4841:HG2_PB_pbsv_16836:HG3_Ill_Krunchall_22130:HG3_Ill_GATKHC_26484:HG3_Ill_GATKHCSBGrefine_10990:HG3_Ill_250bpfermikitraw_21555:HG2_Ill_SpiralSDKrefine_6831:HG2_Ill_Krunchall_22557:HG2_Ill_GATKHC_26638:HG2_Ill_GATKHCSBGrefine_11049:HG2_Ill_250bpfermikitraw_22204:HG2_Ill_breakscan11_2408:HG3_PB_pbsv_16491:HG3_Ill_SVrefine2DISCOVARDovetail_11993:HG2_PB_SVrefine2PBcRplusDovetail_4439:HG2_PB_SVrefine2PB10Xhap12_12222;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22204:HG2_Ill_GATKHCSBGrefine_11049:HG2_Ill_GATKHC_26638:HG2_Ill_Krunchall_22557:HG2_Ill_SpiralSDKrefine_6831:HG3_Ill_250bpfermikitraw_21555:HG3_Ill_GATKHCSBGrefine_10990:HG3_Ill_GATKHC_26484:HG3_Ill_Krunchall_22130;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.0484848;PBcalls=5;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-82;DistBack=31;DistForward=-80;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=120;REFWIDENED=17:50787908-50788109;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1494.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:37:0|1:32:0:2:31:0|1:32:0:0:11:0/1:34:14:./.:.:.:.:.:.
chr17	51417825	HG2_Ill_SpiralSDKrefine_6835	CTACAGACTTAAACATCCCTGTCTGACAGCTCTGAAGAGAAAAGTGGTTCTCCCAGCATGACGTTTGAGTGTTGAGAATGGACAGACTGCCTTTTCAAGTGGGTCCCT	C	20	PASS	ClusterIDs=HG2_PB_HySA_30629:HG2_PB_SVrefine2PB10Xhap12_12225:HG2_Ill_manta_4520:HG2_Ill_breakscan11_2409:HG2_Ill_SpiralSDKrefine_6835:HG2_Ill_GATKHCSBGrefine_11052:HG2_10X_SVrefine210Xhap12_11661:HG2_PB_pbsv_16839;NumClusterSVs=8;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11661:HG2_Ill_GATKHCSBGrefine_11052:HG2_Ill_SpiralSDKrefine_6835:HG2_Ill_breakscan11_2409:HG2_Ill_manta_4520:HG2_PB_SVrefine2PB10Xhap12_12225;NumExactMatchSVs=6;ClusterMaxShiftDist=0.106195;ClusterMaxSizeDiff=0.106195;ClusterMaxEditDist=0.106195;PBcalls=3;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-107;DistBack=12576;DistForward=9923;DistMin=9923;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=0/0;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=17:51417826-51417932;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1495.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:27:0|1:22:1:6:26:./.:25:0:7:15:0/1:22:17:./.:.:.:.:.:.
chr17	52705176	HG2_Ill_svaba_20750	AAATCATCTGCTTGCAGTATATTTGCAGAAACCAAATAATCAAAGGGACTT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_1097:HG2_PB_PB10Xdip_13507:HG2_PB_assemblyticsPBcR_10431:HG4_Ill_svaba_20709:HG4_Ill_Krunchall_22871:HG4_Ill_GATKHC_26585:HG4_Ill_GATKHCSBGrefine_11403:HG4_Ill_Cortex_1421:HG4_Ill_250bpfermikitraw_21857:HG4_Ill_150bpfermikitraw_21050:HG4_CG_vcfBeta_10528:HG2_Ill_svaba_20750:HG2_Ill_scalpel_15694:HG2_Ill_breakscan11_2410:HG2_Ill_GATKHC_26652:HG2_Ill_GATKHCSBGrefine_11057:HG2_Ill_Cortex_3464:HG2_Ill_250bpfermikitraw_22218:HG2_Ill_150bpfermikitraw_20932:HG2_CG_vcfBeta_9524:HG2_Ill_Krunchall_22567:HG4_Ill_Spiral_1308;NumClusterSVs=22;ExactMatchIDs=HG2_CG_vcfBeta_9524:HG2_Ill_150bpfermikitraw_20932:HG2_Ill_250bpfermikitraw_22218:HG2_Ill_Cortex_3464:HG2_Ill_GATKHCSBGrefine_11057:HG2_Ill_GATKHC_26652:HG2_Ill_breakscan11_2410:HG2_Ill_scalpel_15694:HG2_Ill_svaba_20750:HG4_CG_vcfBeta_10528:HG4_Ill_150bpfermikitraw_21050:HG4_Ill_250bpfermikitraw_21857:HG4_Ill_Cortex_1421:HG4_Ill_GATKHCSBGrefine_11403:HG4_Ill_GATKHC_26585:HG4_Ill_Krunchall_22871:HG4_Ill_svaba_20709;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.039604;PBcalls=2;Illcalls=18;TenXcalls=0;CGcalls=2;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=2;HG2count=13;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=11550;DistForward=4218;DistMin=4218;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=17:52705175-52705228;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1497.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:36:0|1:42:0:0:34:1|0:0:27:37:0:0/1:30:20:./.:.:.:.:.:.
chr17	52783864	HG4_Ill_manta_3832	CGTATGTCCTGAATGGTATTGCCTCAGTCATCTTCCACAGTTTTTATAGTTTTTCATTTTACATTTAAGAGTTTACTCCATTTTGAGTTAATTTTTGTATATGGTATAAGGAAGGGGTCCAGTTTCAATTTTCTGCATATGGCTAGCCAGTTAACCCAGCACCATTTATTGAACCAGTTATCCCAGCACCACTTATTGAATAGGGAATCCTTTCCCCCTTGCTTGTTTTTGTCAGGTTTGTCGAATATCAGATAGTTGTAGGTGTGCGATCTTATTTCCGGGTTCTCTATTCTATTCCACTGGTCTACGTGTCTGCTTCTGTACCAGTACCATGCTGTTTTGGTTACTGTAGAAATGTAGTATAGTTTGAAGTTGGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTTGCTTAGGATTGCATTGGCTGTTCAGGCTGTTTTTCATTCCACATGAATTTTAAAATAGTTTTTCCTTCTAGTTCTGTGAAGGTCAATGATAGTTTAACAGGCATACCATTGAATCTATAAATTGCTTTGGGCACTATGGCCATTTTGCAATATTGATTCTTCCTATCCTTGAGCATAGAATGTTTTTTCATTTGTTTGTCATCTCTGATTTCTTTGAGAAGTGGTTTGTAGCTCTCCTTGTAGAGATCTTTCACCTCCCTGGTTAGCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11669:HG2_PB_pbsv_16846:HG2_10X_allpass_2599:HG4_PB_pbsv_16746:HG4_PB_assemblyticsfalcon_10588:HG2_PB_assemblyticsfalcon_10818:HG3_PB_assemblyticsfalcon_10788:HG3_PB_SVrefine2Falcon1Dovetail_10395:HG4_Ill_Krunchall_22873:HG2_Ill_Krunchall_22569:HG2_Ill_tnscope_1794:HG4_PB_SVrefine2PBcRDovetail_8405:HG4_PB_SVrefine2Falcon1Dovetail_10421:HG4_Ill_manta_3832:HG4_Ill_SVrefine2DISCOVARDovetail_11756:HG4_Ill_MetaSV_2055:HG4_Ill_GATKHCSBGrefine_11404:HG4_10X_allpass_3041:HG2_PB_SVrefine2PB10Xhap12_12230:HG2_PB_SVrefine2Falcon2Bionano_8276:HG2_PB_SVrefine2Falcon1plusDovetail_4846:HG2_Ill_manta_4523:HG2_Ill_SpiralSDKrefine_6842:HG2_Ill_MetaSV_1994:HG2_Ill_GATKHCSBGrefine_11058;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11669:HG4_PB_SVrefine2PBcRDovetail_8405:HG4_PB_SVrefine2Falcon1Dovetail_10421:HG4_Ill_manta_3832:HG4_Ill_SVrefine2DISCOVARDovetail_11756:HG4_Ill_MetaSV_2055:HG4_Ill_GATKHCSBGrefine_11404:HG4_10X_allpass_3041:HG2_PB_SVrefine2PB10Xhap12_12230:HG2_PB_SVrefine2Falcon2Bionano_8276:HG2_PB_SVrefine2Falcon1plusDovetail_4846:HG2_Ill_manta_4523:HG2_Ill_SpiralSDKrefine_6842:HG2_Ill_MetaSV_1994:HG2_Ill_GATKHCSBGrefine_11058;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0164057;ClusterMaxSizeDiff=0.0164057;ClusterMaxEditDist=0.0164057;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-674;DistBack=-677;DistForward=-670;DistMin=-677;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=17:52774732-52787758;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1498.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:30:0|1:34:1:3:21:1|0:0:36:91:0:0/1:46:19:0/1:54:18:.:.:.
chr17	54089744	HG4_Ill_svaba_20717	ATGAGATATTGTATTTCTTAGTATATCTGAGTAAAGTACAAATAAATCTACAAACT	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_20936:HG2_PB_HySA_30641:HG4_PB_pbsv_16750:HG3_PB_pbsv_16505:HG2_PB_pbsv_16848:HG3_PB_assemblyticsfalcon_10795:HG2_PB_assemblyticsPBcR_10439:HG4_PB_assemblyticsfalcon_10592:HG4_Ill_svaba_20717:HG4_Ill_scalpel_15330:HG4_Ill_manta_3834:HG4_Ill_Krunchall_22881:HG4_Ill_GATKHCSBGrefine_11407:HG4_Ill_250bpfermikitraw_21866:HG4_Ill_150bpfermikitraw_21057:HG4_10X_allpass_3042:HG3_Ill_svaba_20957:HG3_Ill_scalpel_16013:HG3_Ill_Krunchall_22148:HG3_Ill_GATKHCSBGrefine_10996:HG3_Ill_250bpfermikitraw_21574:HG3_Ill_150bpfermikitraw_20999:HG2_PB_assemblyticsfalcon_10822:HG2_Ill_svaba_20757:HG2_Ill_scalpel_15700:HG2_Ill_manta_4525:HG2_Ill_SpiralSDKrefine_6844:HG2_Ill_Krunchall_22574:HG2_Ill_GATKHCSBGrefine_11061:HG2_Ill_250bpfermikitraw_22224;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_20936:HG4_PB_assemblyticsfalcon_10592:HG4_Ill_svaba_20717:HG4_Ill_scalpel_15330:HG4_Ill_manta_3834:HG4_Ill_Krunchall_22881:HG4_Ill_GATKHCSBGrefine_11407:HG4_Ill_250bpfermikitraw_21866:HG4_Ill_150bpfermikitraw_21057:HG4_10X_allpass_3042:HG3_Ill_svaba_20957:HG3_Ill_scalpel_16013:HG3_Ill_Krunchall_22148:HG3_Ill_GATKHCSBGrefine_10996:HG3_Ill_250bpfermikitraw_21574:HG3_Ill_150bpfermikitraw_20999:HG2_PB_assemblyticsfalcon_10822:HG2_Ill_svaba_20757:HG2_Ill_scalpel_15700:HG2_Ill_manta_4525:HG2_Ill_SpiralSDKrefine_6844:HG2_Ill_Krunchall_22574:HG2_Ill_GATKHCSBGrefine_11061:HG2_Ill_250bpfermikitraw_22224;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0550459;PBcalls=8;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=21;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-55;DistBack=4649;DistForward=50700;DistMin=4649;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=58;REFWIDENED=17:54089745-54089857;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1499.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:66:1/1:1:4:0:13:./.:0:9:0:4:1/1:0:43:./.:.:.:.:.:.
chr17	55089602	HG2_PB_SVrefine2PB10Xhap12_12239	ATTTTGAGACAGAGTCTCGCTCTGTCACCAGGCTGGAGTGCAGTGGCATGATCTCGGTTCACTGCTACCTCTGCCTCCTGGATTCAAGTGATTCTCCTGCCTCAGCCCCCCGAGTAGCTGGGATTACAGACGCGTGCTATGATGCCCAGCTAATTTTTGTATTTTTAGTACAGATGAGTTTTCGCCATGTTGGCCAGGCTGGTCTCCAACTCCTGGCCTTGTGTGACCCGCCCGTCTTAGCCTCCCAAAGTGTTGGGATTATAGGCATGAGCCACTGCACCCGGCCACCAGCTAATTCTTTTTTAAGTTTTATTTTTGTAGAGACAGGGTCTGGCTATGTTGGCCTGGCTAGTCTCAAACTCCTGCCCTCAAGCAATCCTTCCACCTCAGCCTCCCAAAGTACTGGGATTACAGGCAGGGACCACTGTGCTCAGCTGCTGATTGAATCCTGATTGATACAAAACTTTATTATTTTAATGGCTTCAAAATTCTCCACAATTGGAATCTGCATATCTGATGTCTTTCCGTTGCCTATACTTGTGAGCAACAATTGATCAGATACTCTCAAATCACATCGTTCTTAGTGTTGCCACCTAATGTTGCTGAGAAATTTGAAACCAATTCACTTCTTTTTCATCTTTGTAAATAATGAGTTTATTTTATTTTATTTTTTATTATTTATTTATTTATTTATTTTGAGACAGGGTCTCACTCTGGTTGCCCAGGCTGGAGTGCAGTGGCGTGATATTGGCTCACTGCCTCCCCCATCTCCTGGGCTCAGGTGATTCTCCCACCTCAGCCTCTAAAGCAGCTGAGACTGCAGAGGCCTGCTGCCAAGCCCGGCAACTTTTGTTTGTATTTTTAGTAGAGACTAGGTTTTACCATGTTACCCCAGGCTGATCTCGAACTCCTGGACTCAAGCTATTCGCCCTCCTTGGGCTCCCAAAGTGCGGGGATTACAGATGTGAGCCACCACACCTAGCCAACCAGTTTAATAAATGGTTGCTGTAAATTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGATTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTTGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAAATATTTTTGTTAAATTATGTAAACCGGGAACGTCTGATGGTTACATTGATGTTTAGCTTTTAATGAATTTTGCCTGATGTGTCGTGAGCTTTTAGATCCCCAGGCTCTGATCTTCAGTTCAGCAATGCTTTCCAGTATTTATTTGAATATTGTTTTAAGATATTTTCCCACTTTGTTGTCCTTTAGCTTTCATTCTAGATACTTTTTCTCCAGACTCCCGTCAACATCATTACTTCATTTTCGGTAATGTCACTCTAGACTTTGAGTTTCTTTTTTTTCCTTTTCCTTTTTTTTTTTTTTTGAGACGGAATCTCCGTCTGTCACCAAGGCTGGAGTGCAGTGGCATGATTCCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCTTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCGGCTGATTTTTGTATTTTTAGTAAAGATGGGGTTTCACCATGTTGGCCAGGATGGTCTTGATCTCTTGACCTCGTGATCTGCCTGCCTCGGCCTCCCAGAGTGCTGGGATTACAGGCATGAGTCACTGCGCCCGGCTAGACTTTGAGTTTCTAAAGGATTCTTAACTTCTATAATTATCTTTCTCCTTAATTTATTTTCCCTAGTTATGCCAGCTGCTGTTTCACCTTATCTTTTCATCTCATTTTACATTTCTTATTTCACAGGCTCCCGGTTTGCTTTAATTTCCTTGAGAGCGAGAAAAGTATTTGTAGTTTCCCAGTGCAAAGCTTCCAAGGGATGTTCCTCATTTATCTTTTGTGCTTTGTGTTAATTTCCTCCATTTTAGTTGCAGGTGTTTTTTCCCTATGTTTATGTGTTTGCTTTTTTATGTGTCTGTATCTTTGAATGAGGGCAGTTATATAATCATCTAATTGATTATCTGGTTATTTTTCAGATTGTCCACTTAATTCTTATTCAGGAAGCCTAGATGTGGCGGAGCTATATGGTCCTCACAGTTCTTCAGTTGCCTAAGGGCGGTGAATGCCCAGCTCTTGGATAATAATTATTGGGAACTTATTTCCTGTGTCCCTTAGGACTTAGGGAGTGTTTCCTTCCTAATGACATGAGTGCTCAGAATTTGTTGTGTTCCCAGCTTCAGGATGAACCCAAAACTTTGGTAAGATGCAAAGTCCATGATAAATCCAGGGACTCCTTATTTGATGAATATATTAGTTATCTATTACTGTATAAAAAATTACGCAGAAGGCCAGGCATGCTGGCTCATGCCTGTAATTCTAGCACTTTGGGAAGCCAAGGTGGAAGGGTTGCTTGAAGCCAGGAGTTCAAAACAAGCCTGGTTAATATAGCGAGGCCCTGTCCCTATTAATTTTTAAAAAATTAAAATAAATAAAATACCCAGAAACTTGGTGGCTTAAAACAACATTTATTATCTGACGGTTTCTGTATGTGAGGAGTCCACCTGTGGCTTAGCTGGGTCCTCTACTTTAGGACCTCTACAAGACTGCAATCAAGGGTTGGCCAGGGCAGCAGTCATCTCAAGGCCCAACTAGGGTAGAATGTGGTTCCAAGTTCAGCCATGAGGTTATTGGCACGATTCGCTTCCTCATAGGCTGTTGGGCTGAAGGACTCCCTTAATTACTTGTCATGTGGACCCTTCCATGGGCAGCTCACAATATGGCAGCTGGCTTCATCAGATAGACACAGAGAAAGAAAGAGTGAGAGAGCCAGAGAGAGAGAGCATGGGCAAATGTGCAAGACAAAGGTCACGATCTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4851:HG3_10X_allpass_3206:HG2_10X_allpass_2600:HG3_Ill_MetaSV_2134:HG2_Ill_MetaSV_1997:HG2_Ill_tnscope_1795:HG3_PB_pbsv_16513:HG3_PB_SVrefine2PBcRDovetail_8142:HG2_PB_pbsv_16855:HG2_PB_SVrefine2PBcRplusDovetail_4447:HG2_PB_SVrefine2PB10Xhap12_12239:HG2_PB_SVrefine2Falcon2Bionano_8281;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4851:HG3_PB_SVrefine2PBcRDovetail_8142:HG2_PB_pbsv_16855:HG2_PB_SVrefine2PBcRplusDovetail_4447:HG2_PB_SVrefine2PB10Xhap12_12239:HG2_PB_SVrefine2Falcon2Bionano_8281;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00679282;ClusterMaxSizeDiff=0.00679282;ClusterMaxEditDist=0.015529;PBcalls=7;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-3099;DistBack=4359;DistForward=5848;DistMin=4359;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=17:55089603-55092747;PctSeqSimilarity=0.9156;PctSizeSimilarity=0.9997;PctRecOverlap=0.9639;SizeDiff=-1;StartDistance=-111;EndDistance=-112;GTMatch=0;TruScore=95;MatchId=1500.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:42:32:0|1:41:0:0:21:./.:46:0:8:4:./.:64:5:0/1:235:94:3024:.:.
chr17	55687809	HG2_PB_SVrefine2PBcRplusDovetail_4449	TCTAAAAAAAAAAAAAATTCTACATATAGAGGGCTCAGGAGTGTGTGCAAATGATAAGGCAAAAGTAACAAAATGTTAGCAGTAGGTGAATTCTGGTAAAGGATACTCTCCTTGCAACTTTTCTGTAAATTTGAAATGATTCCTGAGTAAGGAGTTAGAAACTGCAAACCTCCTTGCTGAGTTGCTGTGGATGCTGATGGGAGGAGGCACCCAACCCAGTGGGCAGCAAGGACAAGAGTGTTAGCGACCACAGGGGCCACACTCCCATCAGGCCTTCGTTTTGTTCTCTAAAGGAACATGCTGCTGCCCTAGGTGTCCAGGGGCTAGGTGTCCAGGGGCTAGGTCATTATTCTGAACCCATTACCATGGGGACTATGAGGAAGCCACACCCTCTCTTCTAAGGCCAGTTTGTCGAACAAAGCAGCATATTGGGAGAAGAAAATTTCAGAACAAATCCCATCAATTTTGTTGGGGTGGGGGGTGTTGGCACATCCCTGGTATTGGGAGTGTTTTGTGGCATTGCCAGCTGTGCACCTTGAAAACAGAGACCTGGTCCTTCTGGTATAAGCAGTTGGTCATCAGTGGCCTCTGAGGCTTCTTACAAGTGCTCAGTCAGATGGAACATCTCACTGCATTTCTTGCCCCTTGAATAGACTGCTCTGGTCAGTTGCTATTTGAAACAGTAGCAGCAGTAGCAGCAGCCACTGTGAGAAGCCGTTGGTGCAGGAGACTCAAGGACTGAGACTGGGAGGTGGGCCTTCCTCAAGGGGAAGTCTTAGGAGGTGGGGCCAAAATACCTGCAGCAAGAGGCCTGGTCCCCATGAGCACCACATTTGTTTTGTTTTAGAGGACCATGGGGAGCCAGGCAGGCCTGTGTGGGGCTACAGTGGGAAGGGAGCCCCCGTGCCCTGCCCTCTGCCCTGTGGTGAGAGCAGCCCTAGGTGCCCACTGCTCCAAGGACCCAGCCAGCCAAAAGCCAGAGTGTGAGGAGTGCCTCCTGCTGCCCTGTCAGCTCACTGCCCTTCACCGACCACATGTGGTTGTTGGTCTCCAAAGATTATCCCTAGAGCCCCCTCCCACACGGACTCTAGGCTGGCCCAGTGTCACCAGTAGAATGTGTGGGAGGGAACACTGTGAGTCCCAAGGCTAGGTTAGAAGAAGCCTTGCAGCTTCTGCCTGAGTCTGTTGGAATGCTTGTGCTTGGGACACTTCCTCTTGGGACTTAGCCACCATATTGTGACAAGACCAGGCGCCATGGAGAAGCCATGGTGGACGCCCCATCAGCAGGCCCAGCCAAACCAGTGTGGCTGCCTGCCATGTGAGCGAGGAGCCATCTTGGGCCTCCAGCCTCGTTGAGGCCTCCTCTGGCCTCAGCCCCAGTCACCACCTGACCACAGCGCCATGAGACCACCAGCAAGAGCCCAGCTGAGCCGGTCACCCCACAGAACCCTGAGGAAGGATGATTAAATTGTTGCTCAAAGCCACTAAGTTTGGGGGCAGTTTGTTGCTCAGCAGTAGATACCTGGAACAGAGCATGTGACCAGATAGCCTAAGTACATGACTAGAACCGAAAAGATAGACCACTTTTTACCCTTTTTGGGTTCTGACTGTCACCCGGGTTGTTCATGCCAAGCTCTCTGGCTTATGCAGGGCCTGGGGGAGGACAGCAGGGGAAGGTGACCCGATGTGGGCTAACTCAAGACGCTCGAGAGGCTAACAAGTGCAGAAGCAGCGAGGGGCAGGTTGATGTGTGAGTACTTGCATTCATCTTAGGAGAACAAGACAGTCAGAGCCTCTTCTTTTTCAATACAATGAGAGCTCTCAGAGAGGTGGAGGCTTTCCTTATTTATCTTTGGGTCCCCAAAGCCTAGCACTTGCCTGGCGTGTTGAGTTCCTCCGCATCTGCGTCATTGAATTAAGTGGCTGAGTCTCGGGGGTGGAGGGGACTGGACAGGCTTCCTGGTCCTGAGAAGTCTTTCAAGAGGCCTTCAGGGCAGGCAGGCCAGGTTCCCTGCTGTTAACTGTTACCTGCTGCCTTCCCCTGTCATTCAGATGCCCAGGACAGGCCAGGGTCCCCTGGAGAGTGTATGCGCCATGGCCCCTGGC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_1998:HG3_10X_allpass_3207:HG2_10X_allpass_2601:HG3_PB_assemblyticsfalcon_10808:HG2_PB_assemblyticsPBcR_10455:HG4_PB_assemblyticsfalcon_10605:HG2_PB_assemblyticsfalcon_10839:HG2_Ill_tnscope_1796:HG4_PB_pbsv_16759:HG4_PB_SVrefine2PBcRDovetail_8408:HG4_PB_SVrefine2Falcon1Dovetail_10427:HG4_Ill_SVrefine2DISCOVARDovetail_11761:HG4_Ill_MetaSV_2058:HG4_Ill_GATKHCSBGrefine_11416:HG4_10X_allpass_3044:HG3_PB_pbsv_16514:HG3_PB_SVrefine2PBcRDovetail_8143:HG3_PB_SVrefine2Falcon1Dovetail_10401:HG2_PB_pbsv_16857:HG2_PB_SVrefine2PBcRplusDovetail_4449:HG2_PB_SVrefine2PB10Xhap12_12241:HG2_PB_SVrefine2Falcon2Bionano_8283:HG2_PB_SVrefine2Falcon1plusDovetail_4854:HG2_Ill_SVrefine2DISCOVARplusDovetail_5212:HG2_10X_SVrefine210Xhap12_11673:HG4_Ill_Krunchall_22898:HG3_Ill_Krunchall_22161:HG2_Ill_Krunchall_22590:HG3_Ill_MetaSV_2135;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11673:HG2_Ill_SVrefine2DISCOVARplusDovetail_5212:HG2_PB_SVrefine2Falcon1plusDovetail_4854:HG2_PB_SVrefine2Falcon2Bionano_8283:HG2_PB_SVrefine2PB10Xhap12_12241:HG2_PB_SVrefine2PBcRplusDovetail_4449:HG2_PB_pbsv_16857:HG3_PB_SVrefine2Falcon1Dovetail_10401:HG3_PB_SVrefine2PBcRDovetail_8143:HG3_PB_pbsv_16514:HG4_10X_allpass_3044:HG4_Ill_GATKHCSBGrefine_11416:HG4_Ill_MetaSV_2058:HG4_Ill_SVrefine2DISCOVARDovetail_11761:HG4_PB_SVrefine2Falcon1Dovetail_10427:HG4_PB_SVrefine2PBcRDovetail_8408:HG4_PB_pbsv_16759;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0555042;ClusterMaxSizeDiff=0.0555042;ClusterMaxEditDist=0.0555042;PBcalls=15;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2105;DistBack=15152;DistForward=-2090;DistMin=-2090;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=17:55687810-55689916;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1501.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:49:0|1:36:0:0:36:0|1:48:0:0:26:0/1:59:20:0/1:168:78:2072:.:.
chr17	57145098	HG2_PB_pbsv_16861	TGTTGGTCAGACTGCTCTGGAACTCCTGACTTCAGGTGATCCGCCCGCCTCGGCCTCCCAAGGTGCTGGGGTTACAGGCATGAGCCACCGCGCCCAGCCCACAGTAAAATATTTA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11678:HG4_Ill_Krunchall_22906:HG2_Ill_Krunchall_22596:HG2_PB_assemblyticsfalcon_10846:HG2_PB_assemblyticsPBcR_10463:HG4_Ill_Spiral_1310:HG2_Ill_Spiral_1098:HG4_PB_HySA_24522:HG2_PB_HySA_30673:HG4_PB_pbsv_16763:HG4_PB_SVrefine2PBcRDovetail_8410:HG4_Ill_svaba_20744:HG4_Ill_scalpel_15345:HG4_Ill_manta_3837:HG4_Ill_SVrefine2DISCOVARDovetail_11768:HG4_Ill_GATKHC_26619:HG4_Ill_GATKHCSBGrefine_11417:HG4_10X_allpass_3045:HG2_PB_pbsv_16861:HG2_PB_SVrefine2PBcRplusDovetail_4452:HG2_PB_SVrefine2PB10Xhap12_12244:HG2_PB_SVrefine2Falcon1plusDovetail_4857:HG2_Ill_svaba_20782:HG2_Ill_scalpel_15716:HG2_Ill_SVrefine2DISCOVARplusDovetail_5219:HG2_Ill_GATKHCSBGrefine_11067;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11678:HG4_PB_pbsv_16763:HG4_PB_SVrefine2PBcRDovetail_8410:HG4_Ill_svaba_20744:HG4_Ill_scalpel_15345:HG4_Ill_manta_3837:HG4_Ill_SVrefine2DISCOVARDovetail_11768:HG4_Ill_GATKHC_26619:HG4_Ill_GATKHCSBGrefine_11417:HG4_10X_allpass_3045:HG2_PB_pbsv_16861:HG2_PB_SVrefine2PBcRplusDovetail_4452:HG2_PB_SVrefine2PB10Xhap12_12244:HG2_PB_SVrefine2Falcon1plusDovetail_4857:HG2_Ill_svaba_20782:HG2_Ill_scalpel_15716:HG2_Ill_SVrefine2DISCOVARplusDovetail_5219:HG2_Ill_GATKHCSBGrefine_11067;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0438596;ClusterMaxSizeDiff=0.0438596;ClusterMaxEditDist=0.0438596;PBcalls=10;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-114;DistBack=47506;DistForward=23683;DistMin=23683;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=17:57145099-57145215;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1502.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:27:./.:4:2:0:1:0|1:27:0:0:22:0/1:37:28:./.:.:.:.:.:.
chr17	57870215	HG2_10X_SVrefine210Xhap12_11683	AAATAATAATAATAATAATAATAATTATTATTATTATTATCAGATGAGTGGCTGGGCATGGTGGCTTATGCCTGTAATTCCAGCACTTTGGGAGGCTGAGGTGGAAGGATCACTTGGAGCCCAGGAGTTCAAGACCAGTCTGGGCCAAATAGTAACACCTCCATCTCTTTTTTTTTTGAGGCGAGTTTTGCTCTTGTTGCCCAGACTGGAGTGCAATGGCACAATCTTGGCTTACCACAACCTCTGCCTCCCGAGTTCAAGCAATTCTCCTGCCTCGGCCTTCCAACGTGCTAGGATTACAGGCATGTGCCACCACACCCAGCTAATTTTCTAATTTTTTTTTTAGTAGAGATGGGGTTTCTCCATGTTGGCCAGGCTGGTCTTGAACTCCCGACCTCAGTTGATCTACCTGCCTCAGCCTCCCAAAGTGCTGGGATTGTAGGCGTGAGCCACCATGCCCAGCCTCTATTAATTTTTTTAAAAAGAATTTTCAAAAATTGTCATATGAGGAGTTACTGGCTTCAGACAGGAAAAAGAAAAAGGAAATTACTTGTGTAATATATCCGTTTACTTATTTCTATGCAGTAATAAATCTTGCATACTCAGATATTTTCCCTGAGTGTCTAGAGCACTTGTCCTTCTTGGGCTACAGAGTCCGTTCTTATTTCTAGTAGGAGTTAGGCAGGCACCCACCTGAGTTTGAGTGGATGCCAGCTGCCTAAGAATTACCATGTTTGTGCGTGTGTGCACGCGTGCGCATGTGTGTGTGTGTTTATTTATTTATTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGAAGTGCAGTGGCGTGATATTGTCTCACTGCGGCCTCCACCTCCCGAGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGAAATTACAGGCGAGCACCACCATGCCCGTTTAATTTTTGTGTTTTTAGTAGAGACAGGGTTTC	A	20	PASS	ClusterIDs=HG2_PB_pbsv_16863:HG4_10X_allpass_3046:HG3_PB_HySA_25378:HG2_Ill_manta_4526:HG3_PB_assemblyticsfalcon_10815:HG3_PB_pbsv_16518:HG3_PB_SVrefine2Falcon1Dovetail_10405:HG2_Ill_MetaSV_2001:HG4_PB_assemblyticsfalcon_10613:HG2_PB_assemblyticsPBcR_10465:HG4_PB_SVrefine2Falcon1Dovetail_10431:HG4_Ill_manta_3838:HG4_Ill_SVrefine2DISCOVARDovetail_11770:HG4_Ill_MetaSV_2062:HG4_Ill_GATKHCSBGrefine_11419:HG3_PB_SVrefine2PBcRDovetail_8147:HG3_Ill_manta_3695:HG3_Ill_MetaSV_2138:HG3_Ill_GATKHCSBGrefine_11003:HG2_PB_SVrefine2PBcRplusDovetail_4454:HG2_PB_SVrefine2PB10Xhap12_12246:HG2_Ill_breakscan11_2411:HG2_Ill_GATKHCSBGrefine_11070:HG2_10X_allpass_2602:HG2_10X_SVrefine210Xhap12_11683:HG2_Ill_tnscope_1797:HG4_PB_pbsv_16765;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11683:HG2_10X_allpass_2602:HG2_Ill_GATKHCSBGrefine_11070:HG2_Ill_breakscan11_2411:HG2_PB_SVrefine2PB10Xhap12_12246:HG2_PB_SVrefine2PBcRplusDovetail_4454:HG3_Ill_GATKHCSBGrefine_11003:HG3_Ill_MetaSV_2138:HG3_Ill_manta_3695:HG3_PB_SVrefine2PBcRDovetail_8147:HG4_Ill_GATKHCSBGrefine_11419:HG4_Ill_MetaSV_2062:HG4_Ill_SVrefine2DISCOVARDovetail_11770:HG4_Ill_manta_3838:HG4_PB_SVrefine2Falcon1Dovetail_10431;NumExactMatchSVs=15;ClusterMaxShiftDist=0.123481;ClusterMaxSizeDiff=0.123481;ClusterMaxEditDist=0.123481;PBcalls=12;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-969;DistBack=159805;DistForward=-969;DistMin=-969;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=17:57870216-57871185;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1503.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:26:1|0:4:22:19:0:1|0:0:12:43:0:0/1:65:11:0/1:81:42:1000:.:.
chr17	60934361	HG3_Ill_GATKHC_26545	AACAAAATTTCCCCCCGCCCTTTTCATACAGCACCTTCTATATAACATCAGGGGTAGAAGAGACTGTAGCAGTGATCTCATCCATAGCCTCTTTTACAGTTGAAGAAAATGAAGTACAGAGAGGG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_16525:HG3_Ill_MetaSV_2141:HG3_PB_assemblyticsfalcon_10830:HG3_PB_SVrefine2PBcRDovetail_8151:HG3_PB_SVrefine2Falcon1Dovetail_10410:HG3_Ill_svaba_20996:HG3_Ill_scalpel_16042:HG3_Ill_manta_3696:HG3_Ill_SVrefine2DISCOVARDovetail_12022:HG3_Ill_GATKHC_26545:HG3_Ill_GATKHCSBGrefine_11005:HG3_Ill_Cortex_1478:HG3_Ill_250bpfermikitraw_21612:HG3_Ill_150bpfermikitraw_21035:HG3_CG_vcfBeta_9042:HG3_10X_allpass_3209:HG2_PB_SVrefine2PBcRplusDovetail_4459:HG2_PB_SVrefine2PB10Xhap12_12250:HG2_Ill_svaba_20797:HG2_Ill_scalpel_15732:HG2_Ill_manta_4527:HG2_Ill_breakscan11_2412:HG2_Ill_SpiralSDKrefine_6870:HG2_Ill_SVrefine2DISCOVARplusDovetail_5244:HG2_Ill_MetaSV_2003:HG2_Ill_GATKHC_26698:HG2_Ill_GATKHCSBGrefine_11073:HG2_Ill_Cortex_3476:HG2_CG_vcfBeta_9551:HG2_10X_allpass_2603:HG2_10X_SVrefine210Xhap12_11691:HG2_PB_assemblyticsPBcR_10484:HG3_Ill_Spiral_17241:HG2_Ill_Spiral_1099:HG2_Ill_Krunchall_22615:HG2_PB_pbsv_16868;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11691:HG2_10X_allpass_2603:HG2_CG_vcfBeta_9551:HG2_Ill_Cortex_3476:HG2_Ill_GATKHCSBGrefine_11073:HG2_Ill_GATKHC_26698:HG2_Ill_MetaSV_2003:HG2_Ill_SVrefine2DISCOVARplusDovetail_5244:HG2_Ill_SpiralSDKrefine_6870:HG2_Ill_breakscan11_2412:HG2_Ill_manta_4527:HG2_Ill_scalpel_15732:HG2_Ill_svaba_20797:HG2_PB_SVrefine2PB10Xhap12_12250:HG2_PB_SVrefine2PBcRplusDovetail_4459:HG3_10X_allpass_3209:HG3_CG_vcfBeta_9042:HG3_Ill_150bpfermikitraw_21035:HG3_Ill_250bpfermikitraw_21612:HG3_Ill_Cortex_1478:HG3_Ill_GATKHCSBGrefine_11005:HG3_Ill_GATKHC_26545:HG3_Ill_SVrefine2DISCOVARDovetail_12022:HG3_Ill_manta_3696:HG3_Ill_scalpel_16042:HG3_Ill_svaba_20996:HG3_PB_SVrefine2Falcon1Dovetail_10410:HG3_PB_SVrefine2PBcRDovetail_8151:HG3_PB_assemblyticsfalcon_10830;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.0487805;PBcalls=8;Illcalls=23;TenXcalls=3;CGcalls=2;PBexactcalls=5;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=2;HG2count=19;HG3count=17;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-124;DistBack=12031;DistForward=-101;DistMin=-101;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=17:60934362-60934485;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1504.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:29:0|1:19:2:2:22:0|1:27:0:0:13:0/1:38:9:./.:.:.:.:.:.
chr17	62213101	HG4_PB_SVrefine2Falcon1Dovetail_10437	TGGCCTGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAGGGAGGGCGGATCAGGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCCATCTCTACTTAAAATACAAAAATTAGCCGGGCGTGGTGGCACGTGCTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCACTTGGACCCCAGAGGCAGAGATTGCAGTGAGCCGAGATCGTGCCAGTGCACTCCAGCCTGGGCGATAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGTGTTGGAATTACAGGCATGAGCCCCTGTGGCCAGCCAGTACATTGCTTGAGGCTTAATATGTAGACCTTATCTATTTTCTCTTTCCTTTCTTCCTAGGAGGACTCATTTAACATATTTTATATACCAAATTTTATTTTATTTTATTATTTATTTTTGAGACAGAGTCTTTCTGTCGCCCAGGCTAGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCTGCCTCAGCCTCCCAGGTAGCTGGGATTACAGGTGCCTGCCACCAAGCCTGGCTAATTTTTTGTATTTTTAGTAGAGGCGGGGTTTCACCATCTTGGCCAGGCTGGTCTTGAACTCCTGACGTCATGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCTTTTATATACCAAATTTTAGAGCAGAAAGGCACTTTAGCCATAATGTAGTCAGCTTCATTTCGCAGATGACTTCATCTTTGACCTCTACATGGATAACTACAATGCATTCATTCAACAAAAATCACTGAAGGCTTCCAAGTACCAGGGATTAGTGCCATAAGGAAATATTAGAGAATTTTCAGGTTGATACAGGACATGCACAGAAATAACCAAGGTACAAGACTGATGGTGAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2006:HG3_PB_pbsv_16530:HG3_10X_allpass_3210:HG2_10X_allpass_2604:HG2_PB_HySA_30705:HG4_PB_pbsv_16773:HG2_PB_pbsv_16872:HG4_Ill_manta_3841:HG4_Ill_MetaSV_2066:HG4_Ill_GATKHCSBGrefine_11426:HG4_10X_allpass_3048:HG3_Ill_manta_3697:HG3_Ill_GATKHCSBGrefine_11008:HG2_Ill_manta_4528:HG2_Ill_SpiralSDKrefine_6875:HG2_Ill_GATKHCSBGrefine_11076:HG2_Ill_tnscope_1799:HG4_PB_SVrefine2PBcRDovetail_8418:HG4_PB_SVrefine2Falcon1Dovetail_10437:HG4_Ill_SVrefine2DISCOVARDovetail_11782:HG3_PB_SVrefine2PBcRDovetail_8155:HG3_PB_SVrefine2Falcon1Dovetail_10415:HG3_Ill_SVrefine2DISCOVARDovetail_12028:HG2_PB_SVrefine2PBcRplusDovetail_4462:HG2_PB_SVrefine2PB10Xhap12_12254:HG2_PB_SVrefine2Falcon2Bionano_8292:HG2_PB_SVrefine2Falcon1plusDovetail_4864:HG2_Ill_SVrefine2DISCOVARplusDovetail_5251:HG2_10X_SVrefine210Xhap12_11697:HG3_Ill_MetaSV_2144;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11697:HG2_Ill_SVrefine2DISCOVARplusDovetail_5251:HG2_PB_SVrefine2Falcon1plusDovetail_4864:HG2_PB_SVrefine2Falcon2Bionano_8292:HG2_PB_SVrefine2PB10Xhap12_12254:HG2_PB_SVrefine2PBcRplusDovetail_4462:HG3_Ill_SVrefine2DISCOVARDovetail_12028:HG3_PB_SVrefine2Falcon1Dovetail_10415:HG3_PB_SVrefine2PBcRDovetail_8155:HG4_Ill_SVrefine2DISCOVARDovetail_11782:HG4_PB_SVrefine2Falcon1Dovetail_10437:HG4_PB_SVrefine2PBcRDovetail_8418;NumExactMatchSVs=12;ClusterMaxShiftDist=0.235781;ClusterMaxSizeDiff=0.235781;ClusterMaxEditDist=0.235781;PBcalls=12;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-970;DistBack=16364;DistForward=-699;DistMin=-699;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=277;REFWIDENED=17:62213102-62214348;PctSeqSimilarity=0.9313;PctSizeSimilarity=0.9979;PctRecOverlap=0.9178;SizeDiff=-2;StartDistance=-78;EndDistance=-80;GTMatch=0;TruScore=94;MatchId=1505.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:0:53:1/1:0:23:0:8:./.:19:29:21:22:0/1:22:18:0/1:15:40:991:.:.
chr17	63272053	HG3_10X_allpass_3211	TGCCTCGGCCTCCCAAAGTGCTGGGATTACCGGCATGAGCCACCGCACCTGGCCTATAGCAGCATTATTCTTTTTGTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTCGCCGAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACGGTAAGCTCCGCCTCCCGGATGCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCAGGCGCCTGCCACCCCGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCCGCCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11701:HG3_Ill_Krunchall_22198:HG4_PB_pbsv_16777:HG4_PB_HySA_24560:HG2_PB_pbsv_16874:HG3_PB_pbsv_16532:HG2_PB_HySA_30711:HG3_PB_HySA_25413:HG3_Ill_MetaSV_2145:HG2_Ill_MetaSV_2008:HG4_Ill_manta_3843:HG4_Ill_GATKHCSBGrefine_11430:HG4_10X_allpass_3050:HG3_Ill_scalpel_16052:HG3_Ill_manta_3698:HG3_Ill_GATKHCSBGrefine_11011:HG3_10X_allpass_3211:HG2_PB_HySA_30710:HG2_Ill_manta_4529:HG2_Ill_SpiralSDKrefine_6878:HG2_Ill_GATKHCSBGrefine_11078:HG2_Ill_tnscope_1800:HG4_PB_SVrefine2PBcRDovetail_8425:HG4_PB_SVrefine2Falcon1Dovetail_10440:HG4_Ill_SVrefine2DISCOVARDovetail_11789:HG3_PB_SVrefine2PBcRDovetail_8157:HG3_PB_SVrefine2Falcon1Dovetail_10418:HG3_Ill_SVrefine2DISCOVARDovetail_12036:HG2_PB_SVrefine2Falcon2Bionano_8294:HG2_PB_SVrefine2Falcon1plusDovetail_4867:HG2_Ill_SVrefine2DISCOVARplusDovetail_5259;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11078:HG2_Ill_SpiralSDKrefine_6878:HG2_Ill_manta_4529:HG2_PB_HySA_30710:HG3_10X_allpass_3211:HG3_Ill_GATKHCSBGrefine_11011:HG3_Ill_manta_3698:HG3_Ill_scalpel_16052:HG4_10X_allpass_3050:HG4_Ill_GATKHCSBGrefine_11430:HG4_Ill_manta_3843;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0283465;ClusterMaxSizeDiff=0.0283465;ClusterMaxEditDist=0.161392;PBcalls=13;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=55891;DistForward=-271;DistMin=-271;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=330;REFWIDENED=17:63271795-63272443;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1506.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:32:./.:26:1:1:3:0|1:33:1:0:17:0/1:21:17:./.:23:2:.:.:.
chr17	63480676	HG2_Ill_scalpel_15746	TCTGGGAAGTGAGGAGCATCTCCACCTGGCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGCTCAGCCCCCTGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCACCTCTGCCCGGCCGCCCCTA	T	20	PASS	ClusterIDs=HG2_Ill_scalpel_15746:HG3_Ill_GATKHCSBGrefine_11012:HG2_Ill_GATKHCSBGrefine_11079:HG2_PB_pbsv_16875:HG3_PB_pbsv_16533:HG3_Ill_scalpel_16053;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_scalpel_15746:HG3_Ill_scalpel_16053;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0819672;ClusterMaxSizeDiff=0.0819672;ClusterMaxEditDist=0.090535;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-126;DistBack=16490;DistForward=3397;DistMin=3397;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=347;REFWIDENED=17:63480346-63480818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1507.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:18:0|1:32:0:2:18:0|1:25:1:0:11:0/1:21:9:./.:.:.:.:.:.
chr17	65022601	HG2_Ill_SpiralSDKrefine_6890	CTGTATTTGAGGAATGTGGTGTATGTGTGTGTATTTGAGGACTGTGGGGTGTGTA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_16880:HG2_PB_assemblyticsfalcon_10883:HG4_PB_pbsv_16782:HG4_Ill_svaba_20780:HG4_Ill_scalpel_15371:HG4_Ill_GATKHC_26667:HG4_Ill_GATKHCSBGrefine_11434:HG4_Ill_250bpfermikitraw_21925:HG4_Ill_150bpfermikitraw_21118:HG2_PB_assemblyticsPBcR_10503:HG2_Ill_svaba_20824:HG2_Ill_scalpel_15754:HG2_Ill_breakscan11_2414:HG2_Ill_SpiralSDKrefine_6890:HG2_Ill_GATKHC_26732:HG2_Ill_GATKHCSBGrefine_11080:HG2_Ill_150bpfermikitraw_21010;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21010:HG2_Ill_GATKHCSBGrefine_11080:HG2_Ill_GATKHC_26732:HG2_Ill_SpiralSDKrefine_6890:HG2_Ill_breakscan11_2414:HG2_Ill_scalpel_15754:HG2_Ill_svaba_20824:HG2_PB_assemblyticsPBcR_10503:HG4_Ill_150bpfermikitraw_21118:HG4_Ill_250bpfermikitraw_21925:HG4_Ill_GATKHCSBGrefine_11434:HG4_Ill_GATKHC_26667:HG4_Ill_scalpel_15371:HG4_Ill_svaba_20780;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0727273;PBcalls=4;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=352;DistForward=-44;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=17:65022600-65022668;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1508.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:26:0|1:19:2:2:21:./.:4:51:155:26:./.:5:1:./.:.:.:.:.:.
chr17	65520854	HG4_Ill_SVrefine2DISCOVARDovetail_11801	TGAAGGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11707:HG4_PB_HySA_24574:HG4_Ill_Krunchall_22955:HG3_Ill_Krunchall_22220:HG2_Ill_Krunchall_22645:HG4_PB_assemblyticsfalcon_10659:HG3_PB_assemblyticsfalcon_10858:HG2_PB_assemblyticsPBcR_10506:HG2_PB_HySA_30728:HG3_PB_pbsv_16543:HG4_Ill_MetaSV_2069:HG3_Ill_MetaSV_2147:HG2_Ill_tnscope_1801:HG4_PB_pbsv_16784:HG4_PB_SVrefine2PBcRDovetail_8431:HG4_PB_SVrefine2Falcon1Dovetail_10443:HG4_Ill_manta_3845:HG4_Ill_SVrefine2DISCOVARDovetail_11801:HG4_Ill_GATKHCSBGrefine_11435:HG4_10X_allpass_3052:HG3_PB_SVrefine2PBcRDovetail_8162:HG3_PB_SVrefine2Falcon1Dovetail_10425:HG3_Ill_scalpel_16063:HG3_Ill_GATKHCSBGrefine_11015:HG3_10X_allpass_3215:HG2_PB_pbsv_16881:HG2_PB_assemblyticsfalcon_10885:HG2_PB_SVrefine2PBcRplusDovetail_4469:HG2_PB_SVrefine2PB10Xhap12_12263:HG2_PB_SVrefine2Falcon2Bionano_8298:HG2_PB_SVrefine2Falcon1plusDovetail_4872:HG2_Ill_scalpel_15756:HG2_Ill_manta_4530:HG2_Ill_breakscan11_2415:HG2_Ill_SpiralSDKrefine_6893:HG2_Ill_SVrefine2DISCOVARplusDovetail_5269:HG2_Ill_GATKHCSBGrefine_11081:HG2_10X_allpass_2605;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11707:HG4_PB_pbsv_16784:HG4_PB_SVrefine2PBcRDovetail_8431:HG4_PB_SVrefine2Falcon1Dovetail_10443:HG4_Ill_manta_3845:HG4_Ill_SVrefine2DISCOVARDovetail_11801:HG4_Ill_GATKHCSBGrefine_11435:HG4_10X_allpass_3052:HG3_PB_SVrefine2PBcRDovetail_8162:HG3_PB_SVrefine2Falcon1Dovetail_10425:HG3_Ill_scalpel_16063:HG3_Ill_GATKHCSBGrefine_11015:HG3_10X_allpass_3215:HG2_PB_pbsv_16881:HG2_PB_assemblyticsfalcon_10885:HG2_PB_SVrefine2PBcRplusDovetail_4469:HG2_PB_SVrefine2PB10Xhap12_12263:HG2_PB_SVrefine2Falcon2Bionano_8298:HG2_PB_SVrefine2Falcon1plusDovetail_4872:HG2_Ill_scalpel_15756:HG2_Ill_manta_4530:HG2_Ill_breakscan11_2415:HG2_Ill_SpiralSDKrefine_6893:HG2_Ill_SVrefine2DISCOVARplusDovetail_5269:HG2_Ill_GATKHCSBGrefine_11081:HG2_10X_allpass_2605;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0644172;ClusterMaxSizeDiff=0.0644172;ClusterMaxEditDist=0.0644172;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=-824;DistForward=25372;DistMin=-824;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=17:65520855-65521195;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1509.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:64:./.:0:3:0:5:1/1:0:21:0:14:1/1:0:61:./.:2:12:.:.:.
chr17	65727354	HG2_Ill_SpiralSDKrefine_6894	TTCGTGCACAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGTTCTGTCGCCCAGGCGGGACTGCTGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTTCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCGCTGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12266:HG4_PB_assemblyticsfalcon_10662:HG4_PB_SVrefine2Falcon1Dovetail_10445:HG4_Ill_Krunchall_22957:HG3_PB_assemblyticsfalcon_10862:HG3_PB_SVrefine2Falcon1Dovetail_10428:HG3_Ill_Krunchall_22222:HG2_Ill_Krunchall_22647:HG4_Ill_Spiral_1314:HG2_PB_PB10Xdip_13589:HG2_PB_pbsv_16883:HG2_Ill_breakscan11_2416:HG4_PB_pbsv_16786:HG2_PB_HySA_30730:HG4_PB_SVrefine2PBcRDovetail_8433:HG4_Ill_scalpel_15379:HG4_Ill_manta_3846:HG4_Ill_SVrefine2DISCOVARDovetail_11803:HG4_Ill_GATKHCSBGrefine_11436:HG4_10X_allpass_3053:HG3_PB_pbsv_16545:HG3_Ill_scalpel_16064:HG3_Ill_manta_3702:HG3_Ill_GATKHCSBGrefine_11016:HG3_10X_allpass_3216:HG2_PB_SVrefine2PB10Xhap12_12267:HG2_Ill_scalpel_15757:HG2_Ill_manta_4531:HG2_Ill_SpiralSDKrefine_6894:HG2_Ill_GATKHCSBGrefine_11082:HG2_10X_allpass_2606:HG4_Ill_MetaSV_2070:HG3_Ill_MetaSV_2149:HG2_Ill_tnscope_1802:HG2_Ill_MetaSV_2010;NumClusterSVs=35;ExactMatchIDs=HG2_10X_allpass_2606:HG2_Ill_GATKHCSBGrefine_11082:HG2_Ill_SpiralSDKrefine_6894:HG2_Ill_manta_4531:HG2_Ill_scalpel_15757:HG2_PB_SVrefine2PB10Xhap12_12267:HG3_10X_allpass_3216:HG3_Ill_GATKHCSBGrefine_11016:HG3_Ill_manta_3702:HG3_Ill_scalpel_16064:HG3_PB_pbsv_16545:HG4_10X_allpass_3053:HG4_Ill_GATKHCSBGrefine_11436:HG4_Ill_SVrefine2DISCOVARDovetail_11803:HG4_Ill_manta_3846:HG4_Ill_scalpel_15379:HG4_PB_SVrefine2PBcRDovetail_8433;NumExactMatchSVs=17;ClusterMaxShiftDist=0.133816;ClusterMaxSizeDiff=0.133816;ClusterMaxEditDist=0.133816;PBcalls=12;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-276;DistBack=42899;DistForward=-233;DistMin=-233;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=17:65727355-65727647;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1510.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:34:0|1:48:0:0:30:1|0:0:26:43:0:0/1:28:25:./.:.:.:.:.:.
chr17	66031566	HG2_PB_pbsv_16885	GACCGCCCGGCCGCTCCCTCACCGCCCGGCCGCTCCCTCACCGCCCGGCCGCTCCCTC	G	20	PASS	ClusterIDs=HG2_10X_allpass_2607:HG2_PB_HySA_30734:HG3_PB_HySA_25433:HG3_PB_pbsv_16547:HG4_PB_pbsv_16788:HG4_PB_HySA_24582:HG4_PB_assemblyticsfalcon_10666:HG4_Ill_svaba_20786:HG4_Ill_Krunchall_22961:HG4_Ill_GATKHC_26679:HG4_Ill_GATKHCSBGrefine_11438:HG4_Ill_250bpfermikitraw_21935:HG4_Ill_150bpfermikitraw_21131:HG3_PB_assemblyticsfalcon_10866:HG3_Ill_svaba_21026:HG3_Ill_scalpel_16065:HG3_Ill_GATKHC_26586:HG3_Ill_GATKHCSBGrefine_11017:HG2_PB_pbsv_16885:HG2_PB_assemblyticsfalcon_10892:HG2_PB_assemblyticsPBcR_10513:HG2_Ill_svaba_20828:HG2_Ill_manta_4532:HG2_Ill_GATKHC_26738:HG2_Ill_GATKHCSBGrefine_11084:HG2_Ill_250bpfermikitraw_22301:HG2_Ill_150bpfermikitraw_21017;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_2607:HG4_PB_assemblyticsfalcon_10666:HG4_Ill_svaba_20786:HG4_Ill_Krunchall_22961:HG4_Ill_GATKHC_26679:HG4_Ill_GATKHCSBGrefine_11438:HG4_Ill_250bpfermikitraw_21935:HG4_Ill_150bpfermikitraw_21131:HG3_PB_assemblyticsfalcon_10866:HG3_Ill_svaba_21026:HG3_Ill_scalpel_16065:HG3_Ill_GATKHC_26586:HG3_Ill_GATKHCSBGrefine_11017:HG2_PB_pbsv_16885:HG2_PB_assemblyticsfalcon_10892:HG2_PB_assemblyticsPBcR_10513:HG2_Ill_svaba_20828:HG2_Ill_manta_4532:HG2_Ill_GATKHC_26738:HG2_Ill_GATKHCSBGrefine_11084:HG2_Ill_250bpfermikitraw_22301:HG2_Ill_150bpfermikitraw_21017;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0350877;PBcalls=10;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=16;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-57;DistBack=10831;DistForward=14628;DistMin=10831;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=39;REFWIDENED=17:66031567-66031662;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1511.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:0:16:1:9:1/1:0:14:0:7:1/1:0:14:./.:.:.:.:.:.
chr17	66960926	HG2_PB_SVrefine2PB10Xhap12_12274	GTGTATGTATATTTGTTTTTTTTGTTTTGTTTTGTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCGGGGTTGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_16794:HG2_10X_allpass_2608:HG4_Ill_Krunchall_22977:HG2_Ill_Krunchall_22663:HG2_PB_assemblyticsPBcR_10523:HG2_PB_pbsv_16890:HG4_PB_HySA_24598:HG2_PB_HySA_30745:HG4_Ill_MetaSV_2074:HG2_Ill_tnscope_1803:HG2_Ill_MetaSV_2015:HG4_PB_assemblyticsfalcon_10678:HG4_PB_SVrefine2PBcRDovetail_8438:HG4_PB_SVrefine2Falcon1Dovetail_10452:HG4_Ill_scalpel_15396:HG4_Ill_manta_3849:HG4_Ill_SVrefine2DISCOVARDovetail_11810:HG4_Ill_GATKHCSBGrefine_11445:HG4_10X_allpass_3054:HG2_PB_SVrefine2PBcRplusDovetail_4478:HG2_PB_SVrefine2PB10Xhap12_12274:HG2_PB_SVrefine2Falcon1plusDovetail_4882:HG2_Ill_manta_4535:HG2_Ill_GATKHCSBGrefine_11087:HG2_10X_SVrefine210Xhap12_11718;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11718:HG2_Ill_GATKHCSBGrefine_11087:HG2_Ill_manta_4535:HG2_PB_SVrefine2Falcon1plusDovetail_4882:HG2_PB_SVrefine2PB10Xhap12_12274:HG2_PB_SVrefine2PBcRplusDovetail_4478:HG4_10X_allpass_3054:HG4_Ill_GATKHCSBGrefine_11445:HG4_Ill_SVrefine2DISCOVARDovetail_11810:HG4_Ill_manta_3849:HG4_Ill_scalpel_15396:HG4_PB_SVrefine2Falcon1Dovetail_10452:HG4_PB_SVrefine2PBcRDovetail_8438:HG4_PB_assemblyticsfalcon_10678;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0885496;ClusterMaxSizeDiff=0.0885496;ClusterMaxEditDist=0.0885496;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=2738;DistForward=-332;DistMin=-332;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=17:66960927-66961274;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1512.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:36:0|1:41:0:0:34:1|0:0:19:42:0:0/1:31:22:0/1:20:4:.:.:.
chr17	68219714	HG2_Ill_svaba_20851	TATATAATTATATTATTATAATATATATGATATAATTATATTATTATAATATATATGATATTATATTATTATAATATATATGATATAATTATATTATTATAATATATATG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5280:HG4_Ill_Krunchall_22990:HG2_PB_assemblyticsPBcR_10532:HG2_PB_SVrefine2PBcRplusDovetail_4479:HG2_PB_SVrefine2PB10Xhap12_12277:HG4_PB_pbsv_16796:HG2_PB_pbsv_16893:HG4_Ill_svaba_20807:HG4_Ill_manta_3850:HG4_Ill_GATKHCSBGrefine_11446:HG4_Ill_250bpfermikitraw_21960:HG4_Ill_150bpfermikitraw_21157:HG4_10X_allpass_3055:HG2_Ill_svaba_20851:HG2_Ill_manta_4536:HG2_Ill_GATKHCSBGrefine_11089:HG4_PB_SVrefine2PBcRDovetail_8441:HG4_Ill_SVrefine2DISCOVARDovetail_11815:HG2_PB_SVrefine2Falcon2Bionano_8308:HG2_PB_SVrefine2Falcon1plusDovetail_4883;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11089:HG2_Ill_manta_4536:HG2_Ill_svaba_20851:HG4_10X_allpass_3055:HG4_Ill_150bpfermikitraw_21157:HG4_Ill_250bpfermikitraw_21960:HG4_Ill_GATKHCSBGrefine_11446:HG4_Ill_manta_3850:HG4_Ill_svaba_20807;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0372093;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.055814;PBcalls=8;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-109;DistBack=44508;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=77;REFWIDENED=17:68219709-68219894;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1513.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:28:0|1:25:2:0:26:./.:0:21:16:2:0/1:30:21:./.:.:.:.:.:.
chr17	68455086	HG3_Ill_SVrefine2DISCOVARDovetail_12063	CAAGATTTTGTGGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCTCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCAGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGATGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCAAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAACTTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTAGCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTAAATTAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11723:HG2_10X_allpass_2609:HG4_10X_allpass_3056:HG3_Ill_Krunchall_22250:HG4_PB_assemblyticsfalcon_10689:HG3_PB_assemblyticsfalcon_10888:HG2_PB_assemblyticsfalcon_10913:HG2_PB_assemblyticsPBcR_10538:HG2_Ill_tnscope_1804:HG4_PB_pbsv_16798:HG4_PB_SVrefine2PBcRDovetail_8444:HG4_PB_SVrefine2Falcon1Dovetail_10456:HG4_Ill_SVrefine2DISCOVARDovetail_11818:HG4_Ill_MetaSV_2075:HG4_Ill_GATKHCSBGrefine_11447:HG3_PB_pbsv_16557:HG3_PB_SVrefine2PBcRDovetail_8170:HG3_PB_SVrefine2Falcon1Dovetail_10440:HG3_Ill_SVrefine2DISCOVARDovetail_12063:HG3_Ill_MetaSV_2156:HG3_Ill_GATKHCSBGrefine_11024:HG2_PB_pbsv_16895:HG2_PB_SVrefine2PBcRplusDovetail_4481:HG2_PB_SVrefine2PB10Xhap12_12279:HG2_PB_SVrefine2Falcon2Bionano_8310:HG2_PB_SVrefine2Falcon1plusDovetail_4885:HG2_Ill_SVrefine2DISCOVARplusDovetail_5282:HG2_Ill_MetaSV_2016:HG2_Ill_GATKHCSBGrefine_11091;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11723:HG4_PB_pbsv_16798:HG4_PB_SVrefine2PBcRDovetail_8444:HG4_PB_SVrefine2Falcon1Dovetail_10456:HG4_Ill_SVrefine2DISCOVARDovetail_11818:HG4_Ill_MetaSV_2075:HG4_Ill_GATKHCSBGrefine_11447:HG3_PB_pbsv_16557:HG3_PB_SVrefine2PBcRDovetail_8170:HG3_PB_SVrefine2Falcon1Dovetail_10440:HG3_Ill_SVrefine2DISCOVARDovetail_12063:HG3_Ill_MetaSV_2156:HG3_Ill_GATKHCSBGrefine_11024:HG2_PB_pbsv_16895:HG2_PB_SVrefine2PBcRplusDovetail_4481:HG2_PB_SVrefine2PB10Xhap12_12279:HG2_PB_SVrefine2Falcon2Bionano_8310:HG2_PB_SVrefine2Falcon1plusDovetail_4885:HG2_Ill_SVrefine2DISCOVARplusDovetail_5282:HG2_Ill_MetaSV_2016:HG2_Ill_GATKHCSBGrefine_11091;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00345026;ClusterMaxSizeDiff=0.00345026;ClusterMaxEditDist=0.00345026;PBcalls=15;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6090;DistBack=6911;DistForward=30329;DistMin=6911;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=17:68455087-68461187;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1514.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:170:./.:0:0:0:0:1/1:0:15:0:16:1/1:0:33:1/1:2:330:6165:.:.
chr17	68920204	HG2_Ill_250bpfermikitraw_22334	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTTCT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_16560:HG4_Ill_GATKHC_26714:HG4_Ill_GATKHCSBGrefine_11448:HG2_Ill_GATKHC_26778:HG2_Ill_GATKHCSBGrefine_11092:HG3_Ill_GATKHC_26617:HG3_Ill_GATKHCSBGrefine_11026:HG4_Ill_manta_3852:HG2_Ill_manta_4539:HG2_Ill_SpiralSDKrefine_6917:HG4_Ill_svaba_20815:HG4_Ill_scalpel_15410:HG4_Ill_Krunchall_23002:HG4_Ill_250bpfermikitraw_21969:HG2_Ill_svaba_20859:HG2_Ill_scalpel_15780:HG2_Ill_Krunchall_22687:HG2_Ill_250bpfermikitraw_22334:HG2_Ill_150bpfermikitraw_21056:HG3_Ill_manta_3708:HG3_Ill_svaba_21052:HG3_Ill_scalpel_16090:HG3_Ill_Krunchall_22256:HG3_Ill_250bpfermikitraw_21673:HG3_Ill_150bpfermikitraw_21093:HG2_PB_pbsv_16899:HG4_PB_pbsv_16801;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21056:HG2_Ill_250bpfermikitraw_22334:HG2_Ill_Krunchall_22687:HG2_Ill_scalpel_15780:HG2_Ill_svaba_20859:HG4_Ill_250bpfermikitraw_21969:HG4_Ill_Krunchall_23002:HG4_Ill_scalpel_15410:HG4_Ill_svaba_20815;NumExactMatchSVs=9;ClusterMaxShiftDist=0.16;ClusterMaxSizeDiff=0.16;ClusterMaxEditDist=0.16129;PBcalls=3;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-59;DistBack=1;DistForward=55;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=17:68920203-68920266;PctSeqSimilarity=0.9737;PctSizeSimilarity=0.9672;PctRecOverlap=0.8871;SizeDiff=-2;StartDistance=-5;EndDistance=-7;GTMatch=0;TruScore=94;MatchId=1515.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:28:0|1:35:4:2:21:./.:7:7:39:2:0/1:31:16:./.:.:.:.:.:.
chr17	69852139	HG4_Ill_GATKHCSBGrefine_11451	TAAGAGTCAGAATGTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2417:HG3_Ill_Krunchall_22273:HG3_PB_assemblyticsfalcon_10899:HG4_PB_assemblyticsfalcon_10705:HG2_PB_assemblyticsfalcon_10933:HG2_PB_assemblyticsPBcR_10555:HG4_PB_pbsv_16805:HG4_Ill_Krunchall_23015:HG3_Ill_Krunchall_22272:HG2_Ill_Krunchall_22701:HG3_PB_pbsv_16564:HG4_PB_HySA_24616:HG4_Ill_MetaSV_2076:HG3_Ill_MetaSV_2159:HG2_PB_HySA_30777:HG2_Ill_tnscope_1805:HG2_Ill_MetaSV_2018:HG4_PB_SVrefine2PBcRDovetail_8449:HG4_PB_SVrefine2Falcon1Dovetail_10460:HG4_Ill_scalpel_15422:HG4_Ill_manta_3853:HG4_Ill_SVrefine2DISCOVARDovetail_11826:HG4_Ill_GATKHCSBGrefine_11451:HG4_10X_allpass_3057:HG3_PB_SVrefine2PBcRDovetail_8174:HG3_PB_SVrefine2Falcon1Dovetail_10445:HG3_Ill_scalpel_16100:HG3_Ill_manta_3709:HG3_Ill_SVrefine2DISCOVARDovetail_12069:HG3_Ill_GATKHCSBGrefine_11028:HG3_10X_allpass_3218:HG2_PB_pbsv_16903:HG2_PB_SVrefine2PBcRplusDovetail_4484:HG2_PB_SVrefine2PB10Xhap12_12283:HG2_PB_SVrefine2Falcon2Bionano_8315:HG2_PB_SVrefine2Falcon1plusDovetail_4889:HG2_Ill_scalpel_15793:HG2_Ill_manta_4540:HG2_Ill_SVrefine2DISCOVARplusDovetail_5289:HG2_Ill_GATKHCSBGrefine_11094:HG2_10X_allpass_2610:HG2_10X_SVrefine210Xhap12_11727:HG3_Ill_Spiral_17294:HG2_Ill_Spiral_1102;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11727:HG2_10X_allpass_2610:HG2_Ill_GATKHCSBGrefine_11094:HG2_Ill_SVrefine2DISCOVARplusDovetail_5289:HG2_Ill_manta_4540:HG2_Ill_scalpel_15793:HG2_PB_SVrefine2Falcon1plusDovetail_4889:HG2_PB_SVrefine2Falcon2Bionano_8315:HG2_PB_SVrefine2PB10Xhap12_12283:HG2_PB_SVrefine2PBcRplusDovetail_4484:HG2_PB_pbsv_16903:HG3_10X_allpass_3218:HG3_Ill_GATKHCSBGrefine_11028:HG3_Ill_SVrefine2DISCOVARDovetail_12069:HG3_Ill_manta_3709:HG3_Ill_scalpel_16100:HG3_PB_SVrefine2Falcon1Dovetail_10445:HG3_PB_SVrefine2PBcRDovetail_8174:HG4_10X_allpass_3057:HG4_Ill_GATKHCSBGrefine_11451:HG4_Ill_SVrefine2DISCOVARDovetail_11826:HG4_Ill_manta_3853:HG4_Ill_scalpel_15422:HG4_PB_SVrefine2Falcon1Dovetail_10460:HG4_PB_SVrefine2PBcRDovetail_8449;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0903427;ClusterMaxSizeDiff=0.0903427;ClusterMaxEditDist=0.0903427;PBcalls=17;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=59181;DistForward=30437;DistMin=30437;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=17:69852140-69852481;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1516.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:./.:0:4:0:4:1/1:0:22:0:12:1/1:0:40:./.:2:10:.:.:.
chr17	69924665	HG2_Ill_GATKHC_26800	CACACATATGTATGTATATATATGTATAATATATATACACACATATGTATGTATATATATGTATAATATATAT	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_22351:HG2_PB_pbsv_16905:HG3_PB_pbsv_16566:HG3_PB_HySA_25463:HG3_Ill_svaba_21073:HG3_Ill_Krunchall_22276:HG3_Ill_GATKHC_26638:HG3_Ill_GATKHCSBGrefine_11030:HG3_Ill_250bpfermikitraw_21687:HG2_PB_assemblyticsfalcon_10936:HG2_PB_assemblyticsPBcR_10558:HG2_Ill_svaba_20881:HG2_Ill_manta_4541:HG2_Ill_Krunchall_22704:HG2_Ill_GATKHC_26800:HG2_Ill_GATKHCSBGrefine_11096;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22351:HG3_PB_pbsv_16566:HG3_Ill_svaba_21073:HG3_Ill_Krunchall_22276:HG3_Ill_GATKHC_26638:HG3_Ill_GATKHCSBGrefine_11030:HG3_Ill_250bpfermikitraw_21687:HG2_PB_assemblyticsfalcon_10936:HG2_PB_assemblyticsPBcR_10558:HG2_Ill_svaba_20881:HG2_Ill_manta_4541:HG2_Ill_Krunchall_22704:HG2_Ill_GATKHC_26800:HG2_Ill_GATKHCSBGrefine_11096;NumExactMatchSVs=14;ClusterMaxShiftDist=0.21118;ClusterMaxSizeDiff=0.21118;ClusterMaxEditDist=0.21118;PBcalls=5;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-72;DistBack=3670;DistForward=-68;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=100;REFWIDENED=17:69924645-69924816;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1517.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:44:0|1:24:3:1:34:0|1:36:0:1:16:0/1:45:23:./.:.:.:.:.:.
chr17	70056521	HG4_PB_SVrefine2PBcRDovetail_8450	TTTCTTTCTCTCTCTCTCTCTTTTTTCTCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTTTCTTTTGAGACAGGGTCTCACTCTGTCACGCAGGCTGGAGTGCAGTGATGTGATCTCAGCTCACTGCAACCTCTGGCTCCCAGGTTCAAGCAATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGGG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5290:HG2_10X_SVrefine210Xhap12_11728:HG4_PB_pbsv_16807:HG3_PB_pbsv_16567:HG2_PB_pbsv_16906:HG4_PB_SVrefine2Falcon1Dovetail_10461:HG2_PB_SVrefine2Falcon1plusDovetail_4890:HG4_PB_SVrefine2PBcRDovetail_8450:HG4_Ill_SVrefine2DISCOVARDovetail_11827:HG3_PB_SVrefine2PBcRDovetail_8175:HG2_PB_SVrefine2PB10Xhap12_12284:HG2_PB_SVrefine2Falcon2Bionano_8316;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5290:HG4_PB_SVrefine2PBcRDovetail_8450:HG4_Ill_SVrefine2DISCOVARDovetail_11827:HG3_PB_SVrefine2PBcRDovetail_8175:HG2_PB_SVrefine2PB10Xhap12_12284:HG2_PB_SVrefine2Falcon2Bionano_8316;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0473684;ClusterMaxSizeDiff=0.0473684;ClusterMaxEditDist=0.12234;PBcalls=9;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-187;DistBack=17718;DistForward=-96;DistMin=-96;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=382;REFWIDENED=17:70056522-70057090;PctSeqSimilarity=0.9305;PctSizeSimilarity=0.9842;PctRecOverlap=0.5079;SizeDiff=-3;StartDistance=-91;EndDistance=-94;GTMatch=0;TruScore=80;MatchId=1518.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:26:0|1:16:3:4:18:0/0:19:0:14:0:0/0:30:0:./.:.:.:.:.:.
chr17	70083503	HG2_Ill_Krunchall_22706	ATATATATATATATATATATTTATATATATATATATTTATATATATATATTTATATATATATATTTATATATATATATTTATATATATATATT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_16568:HG4_PB_assemblyticsfalcon_10707:HG4_PB_SVrefine2Falcon1Dovetail_10462:HG3_PB_HySA_25467:HG3_PB_assemblyticsfalcon_10902:HG3_PB_SVrefine2Falcon1Dovetail_10446:HG4_Ill_Krunchall_23017:HG3_Ill_svaba_21075:HG3_Ill_manta_3710:HG3_Ill_GATKHC_26641:HG3_Ill_GATKHCSBGrefine_11031:HG3_Ill_250bpfermikitraw_21690:HG3_Ill_150bpfermikitraw_21112:HG2_PB_SVrefine2Falcon2Bionano_8317:HG2_Ill_manta_4542:HG2_Ill_SpiralSDKrefine_6929:HG2_Ill_Krunchall_22706:HG2_Ill_GATKHC_26801:HG2_Ill_GATKHCSBGrefine_11097:HG2_Ill_250bpfermikitraw_22353:HG2_Ill_150bpfermikitraw_21073:HG4_Ill_svaba_20834:HG4_Ill_manta_3854:HG4_Ill_GATKHC_26736:HG4_Ill_GATKHCSBGrefine_11453:HG4_10X_allpass_3058:HG4_PB_pbsv_16808:HG4_Ill_SVrefine2DISCOVARDovetail_11828:HG3_PB_SVrefine2PBcRDovetail_8176:HG2_PB_pbsv_16907:HG3_Ill_SVrefine2DISCOVARDovetail_12070:HG2_PB_SVrefine2Falcon1plusDovetail_4891:HG2_10X_SVrefine210Xhap12_11729;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21073:HG2_Ill_250bpfermikitraw_22353:HG2_Ill_GATKHCSBGrefine_11097:HG2_Ill_GATKHC_26801:HG2_Ill_Krunchall_22706:HG2_Ill_SpiralSDKrefine_6929:HG2_Ill_manta_4542:HG2_PB_SVrefine2Falcon2Bionano_8317:HG3_Ill_150bpfermikitraw_21112:HG3_Ill_250bpfermikitraw_21690:HG3_Ill_GATKHCSBGrefine_11031:HG3_Ill_GATKHC_26641:HG3_Ill_manta_3710:HG3_Ill_svaba_21075;NumExactMatchSVs=14;ClusterMaxShiftDist=0.244898;ClusterMaxSizeDiff=0.244898;ClusterMaxEditDist=0.265306;PBcalls=11;Illcalls=20;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-92;DistBack=26729;DistForward=-69;DistMin=-69;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=49;REFWIDENED=17:70083480-70083620;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1519.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:34:0|1:28:4:0:27:./.:3:0:1:10:0/1:28:13:./.:.:.:.:.:.
chr17	71536062	HG4_Ill_150bpfermikitraw_21199	GGCCACGGTACCCAGGATGGGCAGCCCCCACCAGAGACGGGGTCATGCAGCTGTGA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_22368:HG2_PB_assemblyticsfalcon_10953:HG4_PB_HySA_24632:HG3_PB_assemblyticsfalcon_10923:HG2_PB_pbsv_16918:HG4_PB_pbsv_16822:HG3_PB_pbsv_16583:HG4_Ill_GATKHCSBGrefine_11466:HG4_Ill_150bpfermikitraw_21199:HG3_Ill_GATKHCSBGrefine_11040:HG3_Ill_250bpfermikitraw_21708;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22368:HG4_Ill_GATKHCSBGrefine_11466:HG4_Ill_150bpfermikitraw_21199:HG3_Ill_GATKHCSBGrefine_11040:HG3_Ill_250bpfermikitraw_21708;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0181818;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.108108;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-55;DistBack=30001;DistForward=5120;DistMin=5120;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=273;REFWIDENED=17:71535985-71536312;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1520.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:25:0|1:17:3:2:19:./.:0:2:2:1:0/1:6:4:./.:.:.:.:.:.
chr17	72173712	HG3_PB_SVrefine2PBcRDovetail_8185	AGTCTACCCCGCACTCCTACCCTCCAGTTAACCTACTTTGCATACGTTAAAGACTGTTTTACCATTGGCTTGCATCTCTGCATCCCCTGTAGCTAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11740:HG3_PB_pbsv_16587:HG4_PB_pbsv_16826:HG2_PB_pbsv_16921:HG4_PB_HySA_24640:HG2_PB_HySA_30821:HG4_PB_SVrefine2PBcRDovetail_8460:HG4_PB_SVrefine2Falcon1Dovetail_10472:HG4_Ill_SVrefine2DISCOVARDovetail_11843:HG4_Ill_Krunchall_23035:HG4_Ill_GATKHCSBGrefine_11469:HG4_Ill_250bpfermikitraw_22003:HG3_PB_SVrefine2PBcRDovetail_8185:HG3_PB_SVrefine2Falcon1Dovetail_10458:HG3_Ill_Krunchall_22303:HG3_Ill_GATKHCSBGrefine_11042:HG3_Ill_250bpfermikitraw_21716:HG3_10X_allpass_3219:HG2_PB_SVrefine2PBcRplusDovetail_4494:HG2_PB_SVrefine2PB10Xhap12_12297:HG2_PB_SVrefine2Falcon2Bionano_8327:HG2_PB_SVrefine2Falcon1plusDovetail_4901:HG2_Ill_manta_4544:HG2_Ill_SpiralSDKrefine_6943:HG2_Ill_SVrefine2DISCOVARplusDovetail_5303:HG2_Ill_Krunchall_22728:HG2_Ill_GATKHCSBGrefine_11104:HG2_Ill_250bpfermikitraw_22375;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11740:HG4_PB_SVrefine2PBcRDovetail_8460:HG4_PB_SVrefine2Falcon1Dovetail_10472:HG4_Ill_SVrefine2DISCOVARDovetail_11843:HG4_Ill_Krunchall_23035:HG4_Ill_GATKHCSBGrefine_11469:HG4_Ill_250bpfermikitraw_22003:HG3_PB_SVrefine2PBcRDovetail_8185:HG3_PB_SVrefine2Falcon1Dovetail_10458:HG3_Ill_Krunchall_22303:HG3_Ill_GATKHCSBGrefine_11042:HG3_Ill_250bpfermikitraw_21716:HG3_10X_allpass_3219:HG2_PB_SVrefine2PBcRplusDovetail_4494:HG2_PB_SVrefine2PB10Xhap12_12297:HG2_PB_SVrefine2Falcon2Bionano_8327:HG2_PB_SVrefine2Falcon1plusDovetail_4901:HG2_Ill_manta_4544:HG2_Ill_SpiralSDKrefine_6943:HG2_Ill_SVrefine2DISCOVARplusDovetail_5303:HG2_Ill_Krunchall_22728:HG2_Ill_GATKHCSBGrefine_11104:HG2_Ill_250bpfermikitraw_22375;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0314136;ClusterMaxSizeDiff=0.0314136;ClusterMaxEditDist=0.0425532;PBcalls=13;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-95;DistBack=14207;DistForward=-48;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=95;REFWIDENED=17:72173713-72173902;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1521.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:46:1/1:1:22:2:17:1/1:0:6:0:11:1/1:0:26:./.:.:.:.:.:.
chr17	72297943	HG4_PB_SVrefine2PBcRDovetail_8461	AGAAAGAAAGAAAGAAAGAGAGGGAGAGAGAGGGAAAGAAAAGGAAAGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11741:HG3_PB_SVrefine2PBcRDovetail_8186:HG4_Ill_Krunchall_23039:HG2_PB_assemblyticsfalcon_10966:HG2_PB_SVrefine2Falcon1plusDovetail_4902:HG3_Ill_SVrefine2DISCOVARDovetail_12086:HG3_Ill_GATKHCSBGrefine_11043:HG4_Ill_manta_3857:HG4_Ill_MetaSV_2082:HG4_Ill_GATKHCSBGrefine_11471:HG2_Ill_manta_4545:HG2_Ill_GATKHC_26832:HG2_Ill_GATKHCSBGrefine_11106:HG2_PB_HySA_30825:HG2_PB_pbsv_16923:HG3_PB_pbsv_16588:HG4_PB_pbsv_16828:HG4_PB_SVrefine2Falcon1Dovetail_10473:HG3_PB_SVrefine2Falcon1Dovetail_10459:HG4_PB_SVrefine2PBcRDovetail_8461:HG4_Ill_SVrefine2DISCOVARDovetail_11844:HG2_PB_SVrefine2PBcRplusDovetail_4495:HG2_PB_SVrefine2PB10Xhap12_12298:HG2_PB_SVrefine2Falcon2Bionano_8328:HG2_Ill_SVrefine2DISCOVARplusDovetail_5304;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11741:HG4_PB_SVrefine2PBcRDovetail_8461:HG4_Ill_SVrefine2DISCOVARDovetail_11844:HG2_PB_SVrefine2PBcRplusDovetail_4495:HG2_PB_SVrefine2PB10Xhap12_12298:HG2_PB_SVrefine2Falcon2Bionano_8328:HG2_Ill_SVrefine2DISCOVARplusDovetail_5304;NumExactMatchSVs=7;ClusterMaxShiftDist=0.166667;ClusterMaxSizeDiff=0.166667;ClusterMaxEditDist=0.177083;PBcalls=13;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-206;DistBack=5457;DistForward=-91;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=115;REFWIDENED=17:72297944-72298264;PctSeqSimilarity=0.8984;PctSizeSimilarity=0.9709;PctRecOverlap=0.6812;SizeDiff=6;StartDistance=-66;EndDistance=-60;GTMatch=0;TruScore=85;MatchId=1522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:48:1/1:1:18:3:16:./.:10:2:13:3:0/1:17:8:./.:.:.:.:.:.
chr17	72393115	HG4_Ill_scalpel_15433	TCACCACATCTGGCTAATTTTTGTAGTTTTAGTAGCGATGGGGTTTCACCATGTTGGCCAGGCTGATCTCGAACTCCTGACCTCAGGTGACCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTCCAGGCATGAC	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_10591:HG4_Ill_Krunchall_23040:HG4_PB_HySA_24643:HG2_PB_HySA_30827:HG3_Ill_Krunchall_22308:HG2_Ill_Krunchall_22733:HG4_Ill_MetaSV_2083:HG4_PB_pbsv_16829:HG4_PB_assemblyticsfalcon_10735:HG4_PB_SVrefine2PBcRDovetail_8462:HG4_PB_SVrefine2Falcon1Dovetail_10474:HG4_Ill_scalpel_15433:HG4_Ill_manta_3858:HG4_Ill_SVrefine2DISCOVARDovetail_11845:HG4_Ill_GATKHCSBGrefine_11472:HG4_Ill_150bpfermikitraw_21208:HG4_10X_allpass_3060:HG3_PB_pbsv_16589:HG3_Ill_MetaSV_2162:HG3_Ill_GATKHCSBGrefine_11044:HG2_PB_pbsv_16924:HG2_PB_assemblyticsfalcon_10968:HG2_PB_SVrefine2PB10Xhap12_12299:HG2_PB_SVrefine2Falcon1plusDovetail_4903:HG2_Ill_scalpel_15812:HG2_Ill_breakscan11_2418:HG2_Ill_SpiralSDKrefine_6947:HG2_Ill_MetaSV_2021:HG2_Ill_GATKHCSBGrefine_11107:HG2_10X_allpass_2612:HG2_PB_SVrefine2PBcRplusDovetail_4496;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_2612:HG2_Ill_GATKHCSBGrefine_11107:HG2_Ill_MetaSV_2021:HG2_Ill_SpiralSDKrefine_6947:HG2_Ill_breakscan11_2418:HG2_Ill_scalpel_15812:HG2_PB_SVrefine2Falcon1plusDovetail_4903:HG2_PB_SVrefine2PB10Xhap12_12299:HG2_PB_assemblyticsfalcon_10968:HG2_PB_pbsv_16924:HG3_Ill_GATKHCSBGrefine_11044:HG3_Ill_MetaSV_2162:HG3_PB_pbsv_16589:HG4_10X_allpass_3060:HG4_Ill_150bpfermikitraw_21208:HG4_Ill_GATKHCSBGrefine_11472:HG4_Ill_SVrefine2DISCOVARDovetail_11845:HG4_Ill_manta_3858:HG4_Ill_scalpel_15433:HG4_PB_SVrefine2Falcon1Dovetail_10474:HG4_PB_SVrefine2PBcRDovetail_8462:HG4_PB_assemblyticsfalcon_10735:HG4_PB_pbsv_16829;NumExactMatchSVs=23;ClusterMaxShiftDist=0.15331;ClusterMaxSizeDiff=0.15331;ClusterMaxEditDist=0.20979;PBcalls=13;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=4;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-134;DistBack=11239;DistForward=9451;DistMin=9451;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=17:72393116-72393256;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1523.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:27:./.:10:5:2:18:1|0:0:9:18:0:0/1:40:20:./.:.:.:.:.:.
chr17	73040282	HG2_PB_SVrefine2Falcon2Bionano_8331	GCTAATTTTTGTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAACTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_PB_PB10Xdip_13647:HG2_PB_assemblyticsPBcR_10603:HG2_PB_assemblyticsfalcon_10981:HG4_Ill_Krunchall_23049:HG2_Ill_Spiral_1106:HG4_PB_pbsv_16837:HG4_Ill_MetaSV_2086:HG4_PB_HySA_24653:HG4_Ill_GATKHCSBGrefine_11480:HG2_PB_pbsv_16933:HG2_PB_SVrefine2PBcRplusDovetail_4502:HG2_PB_SVrefine2PB10Xhap12_12305:HG2_PB_SVrefine2Falcon2Bionano_8331:HG2_PB_SVrefine2Falcon1plusDovetail_4908:HG2_Ill_scalpel_15824:HG2_Ill_manta_4549:HG2_Ill_GATKHCSBGrefine_11114:HG2_10X_SVrefine210Xhap12_11749:HG2_PB_HySA_30839:HG2_Ill_tnscope_1806;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11749:HG2_Ill_GATKHCSBGrefine_11114:HG2_Ill_manta_4549:HG2_Ill_scalpel_15824:HG2_PB_SVrefine2Falcon1plusDovetail_4908:HG2_PB_SVrefine2Falcon2Bionano_8331:HG2_PB_SVrefine2PB10Xhap12_12305:HG2_PB_SVrefine2PBcRplusDovetail_4502:HG2_PB_pbsv_16933:HG4_Ill_GATKHCSBGrefine_11480:HG4_PB_HySA_24653;NumExactMatchSVs=11;ClusterMaxShiftDist=0.106452;ClusterMaxSizeDiff=0.106452;ClusterMaxEditDist=0.106452;PBcalls=11;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-310;DistForward=18194;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=17:73040283-73040616;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1524.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:24:0|1:30:2:1:20:0|1:37:0:0:13:0/1:42:17:./.:22:3:.:.:.
chr17	73554887	HG3_Ill_250bpfermikitraw_21736	GCCTCCTCCATCCACACCACGCCTCCTCCATCCGCACCCCACCTCCTCCATCCGCACCCCGCCTCCTCCATCCGCACCCCA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21116:HG3_PB_assemblyticsfalcon_10955:HG2_PB_assemblyticsfalcon_10993:HG3_PB_pbsv_16603:HG2_PB_pbsv_16938:HG4_PB_SVrefine2Falcon1Dovetail_10483:HG3_PB_SVrefine2PBcRDovetail_8194:HG3_Ill_SVrefine2DISCOVARDovetail_12094:HG3_Ill_GATKHC_26692:HG3_Ill_GATKHCSBGrefine_11051:HG3_Ill_250bpfermikitraw_21736:HG2_Ill_SVrefine2DISCOVARplusDovetail_5313;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21116:HG4_PB_SVrefine2Falcon1Dovetail_10483:HG3_PB_SVrefine2PBcRDovetail_8194:HG3_Ill_SVrefine2DISCOVARDovetail_12094:HG3_Ill_GATKHC_26692:HG3_Ill_GATKHCSBGrefine_11051:HG3_Ill_250bpfermikitraw_21736:HG2_Ill_SVrefine2DISCOVARplusDovetail_5313;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0903226;ClusterMaxSizeDiff=0.0903226;ClusterMaxEditDist=0.154839;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-80;DistBack=-48;DistForward=-1;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=140;REFWIDENED=17:73554888-73555107;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1525.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:17:./.:5:11:9:6:./.:0:7:2:4:0/1:1:8:./.:.:.:.:.:.
chr17	74987520	HG2_Ill_svaba_20932	AGGCGTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG3_Ill_Spiral_17336:HG2_10X_allpass_2613:HG2_PB_assemblyticsPBcR_10630:HG4_PB_assemblyticsfalcon_10771:HG3_PB_assemblyticsfalcon_10975:HG2_PB_assemblyticsfalcon_11008:HG4_PB_SVrefine2PBcRDovetail_8476:HG4_Ill_Krunchall_23071:HG3_Ill_Krunchall_22333:HG2_Ill_Krunchall_22764:HG2_PB_HySA_30874:HG2_Ill_Spiral_1107:HG4_Ill_MetaSV_2089:HG3_Ill_MetaSV_2167:HG2_Ill_tnscope_1807:HG2_Ill_MetaSV_2027:HG4_PB_pbsv_16851:HG4_PB_SVrefine2Falcon1Dovetail_10492:HG4_Ill_svaba_20887:HG4_Ill_scalpel_15458:HG4_Ill_manta_3862:HG4_Ill_SVrefine2DISCOVARDovetail_11861:HG4_Ill_GATKHCSBGrefine_11487:HG4_10X_allpass_3063:HG3_PB_pbsv_16614:HG3_PB_SVrefine2PBcRDovetail_8201:HG3_PB_SVrefine2Falcon1Dovetail_10476:HG3_Ill_svaba_21130:HG3_Ill_scalpel_16154:HG3_Ill_manta_3717:HG3_Ill_SVrefine2DISCOVARDovetail_12100:HG3_Ill_GATKHCSBGrefine_11056:HG3_10X_allpass_3222:HG2_PB_pbsv_16946:HG2_PB_SVrefine2PBcRplusDovetail_4512:HG2_PB_SVrefine2PB10Xhap12_12317:HG2_PB_SVrefine2Falcon2Bionano_8340:HG2_PB_SVrefine2Falcon1plusDovetail_4918:HG2_Ill_svaba_20932:HG2_Ill_scalpel_15839:HG2_Ill_manta_4553:HG2_Ill_SVrefine2DISCOVARplusDovetail_5321:HG2_Ill_GATKHCSBGrefine_11120:HG2_10X_SVrefine210Xhap12_11763:HG2_Ill_breakscan11_2419:HG4_Ill_Spiral_1316;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11763:HG2_Ill_GATKHCSBGrefine_11120:HG2_Ill_SVrefine2DISCOVARplusDovetail_5321:HG2_Ill_manta_4553:HG2_Ill_scalpel_15839:HG2_Ill_svaba_20932:HG2_PB_SVrefine2Falcon1plusDovetail_4918:HG2_PB_SVrefine2Falcon2Bionano_8340:HG2_PB_SVrefine2PB10Xhap12_12317:HG2_PB_SVrefine2PBcRplusDovetail_4512:HG2_PB_pbsv_16946:HG3_10X_allpass_3222:HG3_Ill_GATKHCSBGrefine_11056:HG3_Ill_SVrefine2DISCOVARDovetail_12100:HG3_Ill_manta_3717:HG3_Ill_scalpel_16154:HG3_Ill_svaba_21130:HG3_PB_SVrefine2Falcon1Dovetail_10476:HG3_PB_SVrefine2PBcRDovetail_8201:HG3_PB_pbsv_16614:HG4_10X_allpass_3063:HG4_Ill_GATKHCSBGrefine_11487:HG4_Ill_SVrefine2DISCOVARDovetail_11861:HG4_Ill_manta_3862:HG4_Ill_scalpel_15458:HG4_Ill_svaba_20887:HG4_PB_SVrefine2Falcon1Dovetail_10492:HG4_PB_pbsv_16851;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0603175;ClusterMaxSizeDiff=0.0603175;ClusterMaxEditDist=0.0603175;PBcalls=16;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=-836;DistForward=26033;DistMin=-836;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=17:74987521-74987849;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1526.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:23:0:23:1/1:0:28:0:19:1/1:0:47:./.:2:21:.:.:.
chr17	75235948	HG2_Ill_GATKHCSBGrefine_11122	ATGGTGAGGAATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCCGGACTGCGGACTGCAATGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_16853:HG4_Ill_Krunchall_23076:HG3_Ill_Krunchall_22336:HG2_Ill_breakscan11_2420:HG3_PB_pbsv_16617:HG2_PB_pbsv_16948:HG3_Ill_MetaSV_2169:HG2_Ill_tnscope_1808:HG2_Ill_MetaSV_2029:HG4_PB_SVrefine2PBcRDovetail_8478:HG4_PB_SVrefine2Falcon1Dovetail_10494:HG4_Ill_scalpel_15461:HG4_Ill_manta_3863:HG4_Ill_MetaSV_2091:HG4_Ill_GATKHCSBGrefine_11490:HG4_10X_allpass_3064:HG3_PB_SVrefine2PBcRDovetail_8203:HG3_PB_SVrefine2Falcon1Dovetail_10478:HG3_Ill_scalpel_16156:HG3_Ill_manta_3718:HG3_Ill_SVrefine2DISCOVARDovetail_12104:HG3_Ill_GATKHCSBGrefine_11059:HG3_10X_allpass_3223:HG2_PB_SVrefine2PB10Xhap12_12319:HG2_Ill_manta_4554:HG2_Ill_SpiralSDKrefine_6967:HG2_Ill_GATKHCSBGrefine_11122:HG2_10X_allpass_2614:HG2_10X_SVrefine210Xhap12_11767;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11767:HG2_10X_allpass_2614:HG2_Ill_GATKHCSBGrefine_11122:HG2_Ill_SpiralSDKrefine_6967:HG2_Ill_manta_4554:HG2_PB_SVrefine2PB10Xhap12_12319:HG3_10X_allpass_3223:HG3_Ill_GATKHCSBGrefine_11059:HG3_Ill_SVrefine2DISCOVARDovetail_12104:HG3_Ill_manta_3718:HG3_Ill_scalpel_16156:HG3_PB_SVrefine2Falcon1Dovetail_10478:HG3_PB_SVrefine2PBcRDovetail_8203:HG4_10X_allpass_3064:HG4_Ill_GATKHCSBGrefine_11490:HG4_Ill_MetaSV_2091:HG4_Ill_manta_3863:HG4_Ill_scalpel_15461:HG4_PB_SVrefine2Falcon1Dovetail_10494:HG4_PB_SVrefine2PBcRDovetail_8478;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0058309;ClusterMaxSizeDiff=0.0058309;ClusterMaxEditDist=0.00877193;PBcalls=8;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=10;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-342;DistBack=23456;DistForward=-329;DistMin=-329;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=17:75235949-75236306;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1527.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:22:0|1:28:1:2:15:1|0:0:13:29:0:0/1:23:6:0/1:26:10:.:.:.
chr17	75242053	HG3_Ill_svaba_21134	AAGCAGGTGTATGTGTGTGCATGTGTGTTTATATGTGTATGTGTGCATATGAGCATTGTATATGTATGTGTGTGCATGTGTGTTTATATGTGCATATGAATGTGTGCATTGAGCGTGTATGTGCGTGTGTCTGTGCATGTGTTTATGTGTATATGAATGTGTGCATATG	A	20	PASS	ClusterIDs=HG3_PB_HySA_25537:HG2_PB_pbsv_16949:HG2_PB_assemblyticsPBcR_10636:HG4_PB_pbsv_16854:HG4_PB_SVrefine2PBcRDovetail_8479:HG4_PB_SVrefine2Falcon1Dovetail_10495:HG4_Ill_svaba_20891:HG4_Ill_scalpel_15462:HG4_Ill_manta_3864:HG4_Ill_SVrefine2DISCOVARDovetail_11863:HG4_Ill_GATKHC_26816:HG4_Ill_GATKHCSBGrefine_11491:HG4_10X_allpass_3065:HG3_PB_pbsv_16618:HG3_PB_SVrefine2PBcRDovetail_8204:HG3_PB_SVrefine2Falcon1Dovetail_10479:HG3_Ill_svaba_21134:HG3_Ill_scalpel_16157:HG3_Ill_manta_3719:HG3_Ill_SVrefine2DISCOVARDovetail_12105:HG3_Ill_GATKHC_26714:HG3_Ill_GATKHCSBGrefine_11060:HG3_Ill_250bpfermikitraw_21748:HG3_Ill_150bpfermikitraw_21168:HG3_10X_allpass_3224:HG2_PB_assemblyticsfalcon_11013:HG2_PB_SVrefine2PBcRplusDovetail_4514:HG2_PB_SVrefine2PB10Xhap12_12320:HG2_PB_SVrefine2Falcon2Bionano_8341:HG2_PB_SVrefine2Falcon1plusDovetail_4920:HG2_Ill_svaba_20936:HG2_Ill_scalpel_15841:HG2_Ill_manta_4555:HG2_Ill_SpiralSDKrefine_6968:HG2_Ill_SVrefine2DISCOVARplusDovetail_5322:HG2_Ill_GATKHC_26877:HG2_Ill_GATKHCSBGrefine_11123:HG2_10X_allpass_2615:HG2_10X_SVrefine210Xhap12_11768:HG4_Ill_MetaSV_2092:HG3_Ill_MetaSV_2170:HG2_Ill_MetaSV_2030;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11768:HG2_10X_allpass_2615:HG2_Ill_GATKHCSBGrefine_11123:HG2_Ill_GATKHC_26877:HG2_Ill_SVrefine2DISCOVARplusDovetail_5322:HG2_Ill_SpiralSDKrefine_6968:HG2_Ill_manta_4555:HG2_Ill_scalpel_15841:HG2_Ill_svaba_20936:HG2_PB_SVrefine2Falcon1plusDovetail_4920:HG2_PB_SVrefine2Falcon2Bionano_8341:HG2_PB_SVrefine2PB10Xhap12_12320:HG2_PB_SVrefine2PBcRplusDovetail_4514:HG2_PB_assemblyticsfalcon_11013:HG3_10X_allpass_3224:HG3_Ill_150bpfermikitraw_21168:HG3_Ill_250bpfermikitraw_21748:HG3_Ill_GATKHCSBGrefine_11060:HG3_Ill_GATKHC_26714:HG3_Ill_SVrefine2DISCOVARDovetail_12105:HG3_Ill_manta_3719:HG3_Ill_scalpel_16157:HG3_Ill_svaba_21134:HG3_PB_SVrefine2Falcon1Dovetail_10479:HG3_PB_SVrefine2PBcRDovetail_8204:HG3_PB_pbsv_16618:HG4_10X_allpass_3065:HG4_Ill_GATKHCSBGrefine_11491:HG4_Ill_GATKHC_26816:HG4_Ill_SVrefine2DISCOVARDovetail_11863:HG4_Ill_manta_3864:HG4_Ill_scalpel_15462:HG4_Ill_svaba_20891:HG4_PB_SVrefine2Falcon1Dovetail_10495:HG4_PB_SVrefine2PBcRDovetail_8479:HG4_PB_pbsv_16854;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0118343;ClusterMaxSizeDiff=0.0118343;ClusterMaxEditDist=0.0357143;PBcalls=14;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=21;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=14;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-168;DistBack=5727;DistForward=3626;DistMin=3626;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=397;REFWIDENED=17:75241842-75242406;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1528.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:41:1/1:1:18:1:19:1/1:0:33:0:35:1/1:0:35:./.:.:.:.:.:.
chr17	75685430	HG2_Ill_250bpfermikitraw_22422	GATTCAGAGTGGAGAAGTGAGCACCAAGCTCATTCAGCCCATTTTACAGACAAGGAGACTGAC	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_22422:HG2_PB_pbsv_16960:HG3_PB_pbsv_16630:HG4_PB_pbsv_16862:HG2_PB_PB10Xdip_13676:HG4_Ill_Krunchall_23082:HG4_Ill_250bpfermikitraw_22046:HG3_Ill_250bpfermikitraw_21757:HG2_Ill_Krunchall_22775;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22422:HG4_Ill_Krunchall_23082:HG4_Ill_250bpfermikitraw_22046:HG3_Ill_250bpfermikitraw_21757:HG2_Ill_Krunchall_22775;NumExactMatchSVs=5;ClusterMaxShiftDist=0.129032;ClusterMaxSizeDiff=0.125984;ClusterMaxEditDist=0.177419;PBcalls=4;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=14774;DistForward=82;DistMin=82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=232;REFWIDENED=17:75685405-75685698;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1530.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:18:./.:9:11:11:6:./.:0:1:0:1:0/1:6:3:./.:.:.:.:.:.
chr17	75828393	HG3_Ill_svaba_21142	CGGGGGACTACTGGACATTGGAGCTTCAGCAGGAAGTGAGCTGTGGGTGAGCGAGTGAAACGTCATCTGTATTTACAGCCGCTCCTGATCACTCCCATTGCCCCCGAGCTCTGCCTCCTTTCAGATCAGCAGCGGCATTCAATTCTCAAAGGAGCACAATCCCTATTGTGAACTGTGCACATGTGA	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_1109:HG3_Ill_Krunchall_22345:HG2_Ill_Krunchall_22777:HG3_PB_pbsv_16634:HG3_Ill_MetaSV_2175:HG2_PB_HySA_30894:HG3_PB_SVrefine2PBcRDovetail_8212:HG3_Ill_svaba_21142:HG3_Ill_scalpel_16164:HG3_Ill_manta_3720:HG3_Ill_GATKHCSBGrefine_11063:HG3_10X_allpass_3225:HG2_PB_pbsv_16965:HG2_PB_SVrefine2PB10Xhap12_12331:HG2_PB_SVrefine2Falcon1plusDovetail_4929:HG2_Ill_svaba_20943:HG2_Ill_scalpel_15847:HG2_Ill_breakscan11_2422:HG2_Ill_SpiralSDKrefine_6976:HG2_Ill_SVrefine2DISCOVARplusDovetail_5327:HG2_Ill_MetaSV_2033:HG2_Ill_GATKHCSBGrefine_11131:HG2_10X_allpass_2617:HG2_10X_SVrefine210Xhap12_11777:HG3_PB_HySA_25550:HG3_Ill_Spiral_17347;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11777:HG2_10X_allpass_2617:HG2_Ill_GATKHCSBGrefine_11131:HG2_Ill_MetaSV_2033:HG2_Ill_SVrefine2DISCOVARplusDovetail_5327:HG2_Ill_SpiralSDKrefine_6976:HG2_Ill_breakscan11_2422:HG2_Ill_scalpel_15847:HG2_Ill_svaba_20943:HG2_PB_SVrefine2Falcon1plusDovetail_4929:HG2_PB_SVrefine2PB10Xhap12_12331:HG2_PB_pbsv_16965:HG3_10X_allpass_3225:HG3_Ill_GATKHCSBGrefine_11063:HG3_Ill_manta_3720:HG3_Ill_scalpel_16164:HG3_Ill_svaba_21142:HG3_PB_SVrefine2PBcRDovetail_8212;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0160858;ClusterMaxSizeDiff=0.0160858;ClusterMaxEditDist=0.0160858;PBcalls=7;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-185;DistBack=-123;DistForward=-186;DistMin=-186;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=17:75828394-75828581;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1533.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:31:0|1:30:1:4:28:1|0:0:15:37:0:0/1:50:22:./.:.:.:.:.:.
chr17	75988282	HG4_10X_allpass_3067	TAAGATTAAGCAAAACCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_Ill_Spiral_1318:HG3_Ill_Krunchall_22348:HG2_PB_assemblyticsPBcR_10650:HG3_PB_HySA_25552:HG3_PB_assemblyticsfalcon_10997:HG4_PB_assemblyticsfalcon_10793:HG2_PB_assemblyticsfalcon_11027:HG3_Ill_Spiral_17350:HG2_Ill_Spiral_1110:HG2_PB_pbsv_16968:HG4_PB_HySA_24687:HG3_10X_allpass_3226:HG4_Ill_MetaSV_2095:HG3_Ill_MetaSV_2178:HG2_Ill_tnscope_1809:HG4_PB_pbsv_16866:HG4_PB_SVrefine2PBcRDovetail_8483:HG4_PB_SVrefine2Falcon1Dovetail_10502:HG4_Ill_scalpel_15467:HG4_Ill_manta_3866:HG4_Ill_SVrefine2DISCOVARDovetail_11869:HG4_Ill_GATKHCSBGrefine_11494:HG4_10X_allpass_3067:HG3_PB_pbsv_16638:HG3_PB_SVrefine2PBcRDovetail_8216:HG3_PB_SVrefine2Falcon1Dovetail_10489:HG3_Ill_GATKHCSBGrefine_11065:HG2_PB_SVrefine2PBcRplusDovetail_4524:HG2_PB_SVrefine2Falcon2Bionano_8352:HG2_PB_SVrefine2Falcon1plusDovetail_4932:HG2_Ill_manta_4559:HG2_Ill_breakscan11_2423:HG2_Ill_SVrefine2DISCOVARplusDovetail_5329:HG2_Ill_GATKHCSBGrefine_11133:HG2_10X_allpass_2618:HG2_10X_SVrefine210Xhap12_11780;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11780:HG2_10X_allpass_2618:HG2_Ill_GATKHCSBGrefine_11133:HG2_Ill_SVrefine2DISCOVARplusDovetail_5329:HG2_Ill_breakscan11_2423:HG2_Ill_manta_4559:HG2_PB_SVrefine2Falcon1plusDovetail_4932:HG2_PB_SVrefine2Falcon2Bionano_8352:HG2_PB_SVrefine2PBcRplusDovetail_4524:HG3_Ill_GATKHCSBGrefine_11065:HG3_PB_SVrefine2Falcon1Dovetail_10489:HG3_PB_SVrefine2PBcRDovetail_8216:HG3_PB_pbsv_16638:HG4_10X_allpass_3067:HG4_Ill_GATKHCSBGrefine_11494:HG4_Ill_SVrefine2DISCOVARDovetail_11869:HG4_Ill_manta_3866:HG4_Ill_scalpel_15467:HG4_PB_SVrefine2Falcon1Dovetail_10502:HG4_PB_SVrefine2PBcRDovetail_8483:HG4_PB_pbsv_16866;NumExactMatchSVs=21;ClusterMaxShiftDist=0.247423;ClusterMaxSizeDiff=0.247423;ClusterMaxEditDist=0.247423;PBcalls=16;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-315;DistBack=-14;DistForward=11691;DistMin=-14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=17:75988283-75988613;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1535.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:0|1:24:1:1:23:0|1:38:0:0:12:0/1:38:27:0/1:30:7:.:.:.
chr17	76282153	HG2_PB_SVrefine2Falcon1plusDovetail_4937	AAGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCGCTTTGGGAGGCCAAGGCAGGCGGATCACCAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAGATACAAAAAAAAAAAAAAAAAAAAAATTAGCCGGGCGTGGTGGCACACGCCTGTAATCCGAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAAGCAGAGGTTGCAGTGAGCCAATATCGCACCATTGCACTCCAGCCTGGGCAACAGGGCGAGACTCTATCTCAAAAATAAATAAATAAATAAATAAATAATAAATAAAGCTGCTAAAATGAAAAAAGGAAGAAAACATGCTTCTGTTCCTCCTGCCCCCCACCCCTGCCTCCCCTGGGCTTTCAGCTGCTGTCTCTAGAGAATGTTTGGAACAGGTGTCTGGGAATAGCTAACAAAATCCCTCTGGCTTCTCCTTGCCTTGTGGGTTATGGATACTGCCCCCTTCCTCCATCGTGAAATGAAAAGTGACATGACCCTAAAATCTAAAAGGACCATAAGGCCCATTAGGCAATCTCAAGAGAGCCACCTGCAAGGGACAGAGGTGTGGCAGCAGCCCTGGAGAGAAGGAGGCCAAGCAGAGAGGGTGCAGGCTGCCAGGATGGAGCCTCTGCCCGCCACTCACTGGGCAGCAGTGGAGCTGCCTCTGCCTGTATCATCCCCATTTTATGAATGGGGAAGCTGAGGCAGAAGCAGTGATACAGCCAGAATGAACAGTCTTAGGCATCGTCCACAGACCAGCGAGTTACTCCACCAGGTGTCTGTATCACCCAAAGAACCTGAAGTGCATGGGCTCCTTGCGAGCTTTTTTCTCTCAAAAAAAAATTGTGGGGCTGGGCGCCGTGGCTCACACCTGTAGTCCCAGTACTTTGGGAGGCCAAGGCGGGTGGATCACTTGAGTTCAGGAGTTCAAGACCAGCCTGGGCAACATGGCAAAACCCCGTCTCTACTAAACACACAGACAGTTTGGCTGTAGTGGCGCATGCCTGTAGTCCCAGCTACTTGGGGGACTGAGGTGGGAGAATCGCTTGAGCCCAGGAGGCGGAGGTTGTAGGTGAGCCGAGATGGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGATCCTGTCTCAAAAAAACTGTGGTAAAAT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4937:HG4_Ill_Krunchall_23083:HG3_10X_allpass_3227:HG2_10X_allpass_2619:HG2_PB_assemblyticsfalcon_11032:HG2_PB_assemblyticsPBcR_10652:HG3_PB_assemblyticsfalcon_10999:HG3_PB_pbsv_16643:HG2_Ill_MetaSV_2037:HG4_Ill_MetaSV_2098:HG3_PB_SVrefine2PBcRDovetail_8219:HG3_Ill_GATKHCSBGrefine_11067:HG2_Ill_SpiralSDKrefine_6977:HG2_Ill_GATKHCSBGrefine_11136:HG2_PB_pbsv_16973:HG4_PB_pbsv_16871:HG2_Ill_tnscope_1810:HG3_Ill_MetaSV_2179:HG4_PB_SVrefine2PBcRDovetail_8487:HG4_PB_SVrefine2Falcon1Dovetail_10507:HG3_PB_SVrefine2PBcRDovetail_8218:HG3_PB_SVrefine2Falcon1Dovetail_10492:HG2_PB_SVrefine2PBcRplusDovetail_4526:HG2_PB_SVrefine2Falcon2Bionano_8356;NumClusterSVs=24;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4937:HG4_PB_SVrefine2PBcRDovetail_8487:HG4_PB_SVrefine2Falcon1Dovetail_10507:HG3_PB_SVrefine2PBcRDovetail_8218:HG3_PB_SVrefine2Falcon1Dovetail_10492:HG2_PB_SVrefine2PBcRplusDovetail_4526:HG2_PB_SVrefine2Falcon2Bionano_8356;NumExactMatchSVs=7;ClusterMaxShiftDist=0.344175;ClusterMaxSizeDiff=0.344175;ClusterMaxEditDist=0.344175;PBcalls=14;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-1194;DistBack=28592;DistForward=-881;DistMin=-881;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=127;REFWIDENED=17:76282154-76283474;PctSeqSimilarity=0.9107;PctSizeSimilarity=1;PctRecOverlap=0.9305;SizeDiff=0;StartDistance=-83;EndDistance=-83;GTMatch=0;TruScore=94;MatchId=1536.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:21:./.:13:7:11:7:./.:44:0:3:2:0/1:52:7:0/1:84:37:1196:.:.
chr17	76675438	HG2_Ill_SpiralSDKrefine_6984	GATCACTGAGAGAAGGCAAAGTCAGAATGCTCACTGCTGACCCTCGCACAGGGACTGGAGGGAGGAGAAAGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11787:HG3_PB_HySA_25561:HG2_PB_pbsv_16980:HG3_PB_pbsv_16651:HG2_PB_HySA_30910:HG3_Ill_svaba_21159:HG3_Ill_scalpel_16176:HG3_Ill_Krunchall_22358:HG3_Ill_GATKHCSBGrefine_11072:HG3_Ill_250bpfermikitraw_21773:HG2_Ill_svaba_20959:HG2_Ill_scalpel_15851:HG2_Ill_manta_4560:HG2_Ill_SpiralSDKrefine_6984:HG2_Ill_GATKHCSBGrefine_11141:HG2_Ill_250bpfermikitraw_22433:HG3_Ill_Spiral_17355:HG2_Ill_Spiral_1111:HG3_PB_SVrefine2PBcRDovetail_8225:HG2_PB_SVrefine2PBcRplusDovetail_4531:HG2_PB_SVrefine2PB10Xhap12_12344;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22433:HG2_Ill_GATKHCSBGrefine_11141:HG2_Ill_SpiralSDKrefine_6984:HG2_Ill_manta_4560:HG2_Ill_scalpel_15851:HG2_Ill_svaba_20959:HG3_Ill_250bpfermikitraw_21773:HG3_Ill_GATKHCSBGrefine_11072:HG3_Ill_Krunchall_22358:HG3_Ill_scalpel_16176:HG3_Ill_svaba_21159;NumExactMatchSVs=11;ClusterMaxShiftDist=0.041958;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.0425532;PBcalls=7;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-71;DistBack=47533;DistForward=-11;DistMin=-11;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=73;REFWIDENED=17:76675429-76675572;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1538.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:53:./.:30:19:3:8:1|0:0:13:20:1:0/1:32:26:./.:.:.:.:.:.
chr17	77125448	HG4_Ill_manta_3868	ACCTGCTGCTACCTGACAGGTATGGACTGCTTTCCAATCCGGAGTAAGAGGGTGTGCCCTAGAGACCCAGGGGAGGAAGGAGGGGTGGGCAGCAGGACAACGCTCTCTCCTTCCCCCAAGCCCCCCAGGCTCCTGCTGAGCCAGTTGTCCAGGCTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11789:HG2_PB_pbsv_16981:HG4_PB_pbsv_16878:HG3_Ill_Krunchall_22366:HG2_PB_assemblyticsPBcR_10664:HG4_Ill_Krunchall_23092:HG3_Ill_Krunchall_22365:HG2_Ill_Krunchall_22795:HG3_Ill_MetaSV_2183:HG2_PB_HySA_30919:HG4_PB_SVrefine2Falcon1Dovetail_10513:HG4_Ill_svaba_20912:HG4_Ill_manta_3868:HG4_Ill_SVrefine2DISCOVARDovetail_11874:HG4_Ill_MetaSV_2099:HG4_Ill_GATKHCSBGrefine_11499:HG4_10X_allpass_3069:HG3_PB_pbsv_16654:HG3_PB_assemblyticsfalcon_11015:HG3_PB_SVrefine2PBcRDovetail_8227:HG3_PB_SVrefine2Falcon1Dovetail_10499:HG3_Ill_svaba_21170:HG3_Ill_scalpel_16185:HG3_Ill_manta_3723:HG3_Ill_SVrefine2DISCOVARDovetail_12121:HG3_Ill_GATKHCSBGrefine_11074:HG3_Ill_250bpfermikitraw_21781:HG3_Ill_150bpfermikitraw_21198:HG3_CG_vcfBeta_9121:HG3_10X_allpass_3228:HG2_PB_SVrefine2PBcRplusDovetail_4532:HG2_PB_SVrefine2PB10Xhap12_12345:HG2_PB_SVrefine2Falcon1plusDovetail_4943:HG2_Ill_svaba_20967:HG2_Ill_scalpel_15859:HG2_Ill_breakscan11_2424:HG2_Ill_SpiralSDKrefine_6989:HG2_Ill_GATKHCSBGrefine_11142:HG2_10X_allpass_2620;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11789:HG4_PB_SVrefine2Falcon1Dovetail_10513:HG4_Ill_svaba_20912:HG4_Ill_manta_3868:HG4_Ill_SVrefine2DISCOVARDovetail_11874:HG4_Ill_MetaSV_2099:HG4_Ill_GATKHCSBGrefine_11499:HG4_10X_allpass_3069:HG3_PB_pbsv_16654:HG3_PB_assemblyticsfalcon_11015:HG3_PB_SVrefine2PBcRDovetail_8227:HG3_PB_SVrefine2Falcon1Dovetail_10499:HG3_Ill_svaba_21170:HG3_Ill_scalpel_16185:HG3_Ill_manta_3723:HG3_Ill_SVrefine2DISCOVARDovetail_12121:HG3_Ill_GATKHCSBGrefine_11074:HG3_Ill_250bpfermikitraw_21781:HG3_Ill_150bpfermikitraw_21198:HG3_CG_vcfBeta_9121:HG3_10X_allpass_3228:HG2_PB_SVrefine2PBcRplusDovetail_4532:HG2_PB_SVrefine2PB10Xhap12_12345:HG2_PB_SVrefine2Falcon1plusDovetail_4943:HG2_Ill_svaba_20967:HG2_Ill_scalpel_15859:HG2_Ill_breakscan11_2424:HG2_Ill_SpiralSDKrefine_6989:HG2_Ill_GATKHCSBGrefine_11142:HG2_10X_allpass_2620;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0453074;ClusterMaxSizeDiff=0.0453074;ClusterMaxEditDist=0.0453074;PBcalls=12;Illcalls=22;TenXcalls=4;CGcalls=1;PBexactcalls=8;Illexactcalls=17;TenXexactcalls=4;CGexactcalls=1;HG2count=14;HG3count=16;HG4count=9;NumTechs=4;NumTechsExact=4;SVLEN=-155;DistBack=7245;DistForward=-155;DistMin=-155;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=17:77125449-77125607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1539.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:40:./.:8:18:14:18:1|0:0:9:24:0:0/1:38:14:./.:.:.:.:.:.
chr17	77438304	HG4_Ill_GATKHCSBGrefine_11502	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGGGAGGGAGAGAGAGGGAGAGAGAGGGAGTGAGGGAGGGAGAGAGAGG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_16985:HG2_PB_HySA_30925:HG2_Ill_SpiralSDKrefine_6996:HG4_Ill_scalpel_15482:HG4_Ill_manta_3869:HG4_Ill_GATKHC_26849:HG4_Ill_GATKHCSBGrefine_11502:HG2_Ill_scalpel_15867:HG2_Ill_manta_4562:HG2_Ill_GATKHC_26913:HG2_Ill_GATKHCSBGrefine_11146:HG4_PB_pbsv_16883:HG2_PB_PB10Xdip_13701:HG2_PB_SVrefine2PBcRplusDovetail_4534:HG4_PB_SVrefine2PBcRDovetail_8492:HG4_Ill_SVrefine2DISCOVARDovetail_11875:HG4_PB_SVrefine2Falcon1Dovetail_10517:HG2_PB_SVrefine2Falcon1plusDovetail_4946:HG2_Ill_SVrefine2DISCOVARplusDovetail_5337:HG2_10X_SVrefine210Xhap12_11795:HG2_PB_SVrefine2PB10Xhap12_12348:HG4_PB_HySA_24706;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11146:HG2_Ill_GATKHC_26913:HG2_Ill_manta_4562:HG2_Ill_scalpel_15867:HG4_Ill_GATKHCSBGrefine_11502:HG4_Ill_GATKHC_26849:HG4_Ill_manta_3869:HG4_Ill_scalpel_15482;NumExactMatchSVs=8;ClusterMaxShiftDist=0.291188;ClusterMaxSizeDiff=0.291188;ClusterMaxEditDist=0.291188;PBcalls=10;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-114;DistBack=48277;DistForward=-113;DistMin=-113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=44;REFWIDENED=17:77438276-77438429;PctSeqSimilarity=0.896;PctSizeSimilarity=0.8976;PctRecOverlap=0.8594;SizeDiff=-13;StartDistance=-5;EndDistance=-18;GTMatch=0;TruScore=88;MatchId=1540.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:./.:20:7:6:20:0|1:9:1:0:14:0/1:10:15:./.:.:.:.:.:.
chr17	78158398	HG3_PB_SVrefine2PBcRDovetail_8236	TGGGATAGTCGGCCTCTGTCATCCTCCTTTGTCCTTCTCAGCTGGTCCTGGACTCAGGC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5341:HG4_PB_pbsv_16897:HG2_PB_assemblyticsfalcon_11066:HG2_PB_pbsv_16998:HG3_PB_pbsv_16670:HG2_Ill_250bpfermikitraw_22461:HG2_PB_SVrefine2Falcon2Bionano_8373:HG4_PB_SVrefine2PBcRDovetail_8498:HG4_PB_SVrefine2Falcon1Dovetail_10526:HG4_Ill_SVrefine2DISCOVARDovetail_11882:HG3_PB_SVrefine2PBcRDovetail_8236:HG3_PB_SVrefine2Falcon1Dovetail_10510:HG3_Ill_SVrefine2DISCOVARDovetail_12130:HG2_PB_SVrefine2PBcRplusDovetail_4543:HG2_PB_SVrefine2PB10Xhap12_12354;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5341:HG4_PB_SVrefine2PBcRDovetail_8498:HG4_PB_SVrefine2Falcon1Dovetail_10526:HG4_Ill_SVrefine2DISCOVARDovetail_11882:HG3_PB_SVrefine2PBcRDovetail_8236:HG3_PB_SVrefine2Falcon1Dovetail_10510:HG3_Ill_SVrefine2DISCOVARDovetail_12130:HG2_PB_SVrefine2PBcRplusDovetail_4543:HG2_PB_SVrefine2PB10Xhap12_12354;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0512821;ClusterMaxSizeDiff=0.0512821;ClusterMaxEditDist=0.102564;PBcalls=11;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=0;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=235;REFWIDENED=17:78158399-78158691;PctSeqSimilarity=0.9786;PctSizeSimilarity=1;PctRecOverlap=0.661;SizeDiff=0;StartDistance=-20;EndDistance=-20;GTMatch=0;TruScore=87;MatchId=1542.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:0:23:1:24:0/0:7:1:9:0:0/0:29:0:./.:.:.:.:.:.
chr17	78231455	HG3_Ill_250bpfermikitraw_21802	GCACAGTTAGTGGAGGCATCCTCAGCAGAAGGCCCGTCAGAACCACAGAAACAAGACCAGGTGCCGGGTGGGCA	G	20	PASS	ClusterIDs=HG3_PB_HySA_25599:HG2_PB_pbsv_17001:HG3_PB_assemblyticsfalcon_11039:HG3_Ill_svaba_21190:HG3_Ill_scalpel_16205:HG3_Ill_Krunchall_22388:HG3_Ill_GATKHC_26776:HG3_Ill_GATKHCSBGrefine_11082:HG3_Ill_250bpfermikitraw_21802:HG3_Ill_150bpfermikitraw_21218:HG2_PB_assemblyticsfalcon_11069:HG2_PB_assemblyticsPBcR_10694:HG2_Ill_svaba_20988:HG2_Ill_scalpel_15880:HG2_Ill_manta_4563:HG2_Ill_SpiralSDKrefine_7005:HG2_Ill_Krunchall_22816:HG2_Ill_GATKHC_26929:HG2_Ill_GATKHCSBGrefine_11152:HG2_Ill_250bpfermikitraw_22464:HG2_Ill_150bpfermikitraw_21181:HG3_PB_pbsv_16672:HG2_PB_HySA_30954;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21181:HG2_Ill_250bpfermikitraw_22464:HG2_Ill_GATKHCSBGrefine_11152:HG2_Ill_GATKHC_26929:HG2_Ill_Krunchall_22816:HG2_Ill_SpiralSDKrefine_7005:HG2_Ill_manta_4563:HG2_Ill_scalpel_15880:HG2_Ill_svaba_20988:HG2_PB_assemblyticsPBcR_10694:HG2_PB_assemblyticsfalcon_11069:HG3_Ill_150bpfermikitraw_21218:HG3_Ill_250bpfermikitraw_21802:HG3_Ill_GATKHCSBGrefine_11082:HG3_Ill_GATKHC_26776:HG3_Ill_Krunchall_22388:HG3_Ill_scalpel_16205:HG3_Ill_svaba_21190:HG3_PB_assemblyticsfalcon_11039;NumExactMatchSVs=19;ClusterMaxShiftDist=0.213836;ClusterMaxSizeDiff=0.213836;ClusterMaxEditDist=0.222222;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-73;DistBack=3359;DistForward=2789;DistMin=2789;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=70;REFWIDENED=17:78231409-78231551;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1543.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:26:0|1:20:4:2:21:1|0:0:16:22:0:0/1:28:35:./.:.:.:.:.:.
chr17	78655457	HG2_Ill_manta_4568	ATGAGGTGTACGTCTCTTACAGCTTCATGAGGTGTACGTCTCTTACACCTTCATGAGGTGTACGTCTCTTACACCTTCATGAGGTGTACGTCTCTTACACCTTCATGAGGTGTACGTCTCTTACACCTTCATGAGGTGTACGTCTCTTACACCTTCT	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5352:HG2_10X_SVrefine210Xhap12_11808:HG4_Ill_Krunchall_23121:HG3_Ill_Krunchall_22402:HG2_Ill_Krunchall_22826:HG4_PB_assemblyticsfalcon_10859:HG4_PB_SVrefine2Falcon1Dovetail_10540:HG4_Ill_manta_3872:HG4_Ill_GATKHC_26884:HG4_Ill_GATKHCSBGrefine_11518:HG3_Ill_manta_3726:HG3_Ill_GATKHC_26791:HG3_Ill_GATKHCSBGrefine_11092:HG2_Ill_manta_4568:HG2_Ill_GATKHC_26941:HG2_Ill_GATKHCSBGrefine_11165:HG2_Ill_250bpfermikitraw_22473:HG2_Ill_150bpfermikitraw_21192:HG4_PB_HySA_24755:HG2_PB_pbsv_17022:HG4_PB_pbsv_16919:HG3_PB_pbsv_16696:HG4_PB_SVrefine2PBcRDovetail_8504:HG3_PB_SVrefine2Falcon1Dovetail_10521:HG2_PB_SVrefine2PBcRplusDovetail_4554:HG2_PB_SVrefine2PB10Xhap12_12366:HG2_PB_SVrefine2Falcon2Bionano_8385:HG2_PB_SVrefine2Falcon1plusDovetail_4964;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21192:HG2_Ill_250bpfermikitraw_22473:HG2_Ill_GATKHCSBGrefine_11165:HG2_Ill_GATKHC_26941:HG2_Ill_manta_4568:HG3_Ill_GATKHCSBGrefine_11092:HG3_Ill_GATKHC_26791:HG3_Ill_manta_3726:HG4_Ill_GATKHCSBGrefine_11518:HG4_Ill_GATKHC_26884:HG4_Ill_manta_3872:HG4_PB_SVrefine2Falcon1Dovetail_10540:HG4_PB_assemblyticsfalcon_10859;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0638978;ClusterMaxSizeDiff=0.0638978;ClusterMaxEditDist=0.0769231;PBcalls=12;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-156;DistBack=-116;DistForward=-150;DistMin=-150;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=99;REFWIDENED=17:78655391-78655619;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1544.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:57:1/1:4:37:0:5:./.:0:0:0:0:1/1:0:44:./.:.:.:.:.:.
chr17	78665063	HG4_Ill_250bpfermikitraw_22093	GTGTGTGGGTGTGATATGTGTGTGTGCATGTCGTGTGTGTGTGCATGCACGTGTGTGCATGCATAGGTA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_16922:HG4_PB_assemblyticsfalcon_10861:HG3_PB_assemblyticsfalcon_11062:HG2_PB_assemblyticsfalcon_11089:HG2_PB_assemblyticsPBcR_10715:HG2_PB_HySA_30983:HG3_PB_SVrefine2PBcRDovetail_8249:HG3_PB_pbsv_16699:HG2_PB_pbsv_17025:HG2_PB_HySA_30982:HG4_Ill_svaba_20946:HG4_Ill_Krunchall_23123:HG4_Ill_GATKHC_26887:HG4_Ill_GATKHCSBGrefine_11521:HG4_Ill_Cortex_1453:HG4_Ill_250bpfermikitraw_22093:HG4_Ill_150bpfermikitraw_21284:HG4_10X_allpass_3072:HG3_Ill_svaba_21201:HG3_Ill_Krunchall_22403:HG3_Ill_GATKHC_26794:HG3_Ill_GATKHCSBGrefine_11093:HG3_Ill_Cortex_1511:HG3_Ill_250bpfermikitraw_21816:HG3_Ill_150bpfermikitraw_21229:HG3_10X_allpass_3231:HG2_Ill_svaba_20996:HG2_Ill_scalpel_15886:HG2_Ill_manta_4569:HG2_Ill_SpiralSDKrefine_7009:HG2_Ill_Krunchall_22828:HG2_Ill_GATKHC_26944:HG2_Ill_GATKHCSBGrefine_11167:HG2_Ill_Cortex_3544:HG2_Ill_250bpfermikitraw_22475:HG2_Ill_150bpfermikitraw_21193:HG2_10X_allpass_2623:HG2_Ill_breakscan11_2427;NumClusterSVs=38;ExactMatchIDs=HG2_10X_allpass_2623:HG2_Ill_150bpfermikitraw_21193:HG2_Ill_250bpfermikitraw_22475:HG2_Ill_Cortex_3544:HG2_Ill_GATKHCSBGrefine_11167:HG2_Ill_GATKHC_26944:HG2_Ill_Krunchall_22828:HG2_Ill_SpiralSDKrefine_7009:HG2_Ill_manta_4569:HG2_Ill_scalpel_15886:HG2_Ill_svaba_20996:HG3_10X_allpass_3231:HG3_Ill_150bpfermikitraw_21229:HG3_Ill_250bpfermikitraw_21816:HG3_Ill_Cortex_1511:HG3_Ill_GATKHCSBGrefine_11093:HG3_Ill_GATKHC_26794:HG3_Ill_Krunchall_22403:HG3_Ill_svaba_21201:HG4_10X_allpass_3072:HG4_Ill_150bpfermikitraw_21284:HG4_Ill_250bpfermikitraw_22093:HG4_Ill_Cortex_1453:HG4_Ill_GATKHCSBGrefine_11521:HG4_Ill_GATKHC_26887:HG4_Ill_Krunchall_23123:HG4_Ill_svaba_20946;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.103704;PBcalls=10;Illcalls=25;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-68;DistBack=4902;DistForward=-27;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=22;REFWIDENED=17:78665064-78665153;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1545.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:60:1/1:2:10:0:10:./.:0:3:0:1:1/1:0:39:./.:.:.:.:.:.
chr17	78682356	HG2_Ill_svaba_20997	CCATCCTCCAGGGTGTGGTGGGTGCTGACTGTTGTCCCCACCCTCCAGGGTGTGGTGGGTGCTGACTGTCTCCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11809:HG4_PB_assemblyticsfalcon_10863:HG3_PB_HySA_25622:HG3_Ill_Spiral_17385:HG2_PB_HySA_30987:HG2_Ill_Spiral_1113:HG4_PB_pbsv_16924:HG3_PB_pbsv_16701:HG2_PB_pbsv_17027:HG4_Ill_svaba_20947:HG4_Ill_Krunchall_23124:HG4_Ill_GATKHCSBGrefine_11522:HG4_Ill_250bpfermikitraw_22094:HG3_PB_HySA_25621:HG3_Ill_svaba_21202:HG3_Ill_Krunchall_22404:HG3_Ill_GATKHCSBGrefine_11094:HG3_Ill_250bpfermikitraw_21817:HG3_10X_allpass_3232:HG2_Ill_svaba_20997:HG2_Ill_SpiralSDKrefine_7010:HG2_Ill_GATKHCSBGrefine_11168:HG2_Ill_250bpfermikitraw_22476:HG2_Ill_150bpfermikitraw_21194:HG2_10X_allpass_2624:HG4_Ill_Spiral_1320:HG3_PB_SVrefine2PBcRDovetail_8251:HG2_PB_SVrefine2PBcRplusDovetail_4558:HG2_PB_SVrefine2PB10Xhap12_12370:HG2_PB_SVrefine2Falcon2Bionano_8389:HG2_PB_SVrefine2Falcon1plusDovetail_4967:HG2_Ill_SVrefine2DISCOVARplusDovetail_5354;NumClusterSVs=32;ExactMatchIDs=HG2_10X_allpass_2624:HG2_Ill_150bpfermikitraw_21194:HG2_Ill_250bpfermikitraw_22476:HG2_Ill_GATKHCSBGrefine_11168:HG2_Ill_SpiralSDKrefine_7010:HG2_Ill_svaba_20997:HG3_10X_allpass_3232:HG3_Ill_250bpfermikitraw_21817:HG3_Ill_GATKHCSBGrefine_11094:HG3_Ill_Krunchall_22404:HG3_Ill_svaba_21202:HG3_PB_HySA_25621:HG4_Ill_250bpfermikitraw_22094:HG4_Ill_GATKHCSBGrefine_11522:HG4_Ill_Krunchall_23124:HG4_Ill_svaba_20947;NumExactMatchSVs=16;ClusterMaxShiftDist=0.027027;ClusterMaxSizeDiff=0.027027;ClusterMaxEditDist=0.0533333;PBcalls=12;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-73;DistBack=-51;DistForward=3114;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=111;REFWIDENED=17:78682333-78682516;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1546.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:73:./.:0:0:0:0:./.:0:0:0:0:1/1:0:49:./.:.:.:.:.:.
chr17	79129920	HG3_Ill_Krunchall_22424	ATGTTACAATGTATGTTACTATGTTACAATGTATGTTATCATGTTACAATGTATGTTAC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11824:HG2_PB_HySA_31012:HG3_PB_HySA_25647:HG2_PB_pbsv_17045:HG4_Ill_svaba_20970:HG4_Ill_Krunchall_23138:HG4_Ill_GATKHC_26909:HG4_Ill_GATKHCSBGrefine_11532:HG4_Ill_250bpfermikitraw_22111:HG4_Ill_150bpfermikitraw_21296:HG3_PB_assemblyticsfalcon_11085:HG3_Ill_svaba_21232:HG3_Ill_Krunchall_22424:HG3_Ill_GATKHC_26825:HG3_Ill_GATKHCSBGrefine_11102:HG3_Ill_250bpfermikitraw_21839:HG3_Ill_150bpfermikitraw_21249:HG2_Ill_svaba_21022:HG2_Ill_manta_4574:HG2_Ill_SpiralSDKrefine_7023:HG2_Ill_Krunchall_22842:HG2_Ill_GATKHC_26975:HG2_Ill_250bpfermikitraw_22495:HG2_Ill_150bpfermikitraw_21210:HG3_PB_pbsv_16722:HG4_PB_pbsv_16946:HG4_PB_SVrefine2PBcRDovetail_8516:HG4_PB_SVrefine2Falcon1Dovetail_10552:HG4_Ill_SVrefine2DISCOVARDovetail_11903:HG3_PB_SVrefine2PBcRDovetail_8260:HG3_Ill_SVrefine2DISCOVARDovetail_12149:HG2_PB_SVrefine2PBcRplusDovetail_4566:HG2_PB_SVrefine2PB10Xhap12_12379:HG2_PB_SVrefine2Falcon2Bionano_8398:HG2_PB_SVrefine2Falcon1plusDovetail_4977:HG2_Ill_SVrefine2DISCOVARplusDovetail_5363;NumClusterSVs=36;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21210:HG2_Ill_250bpfermikitraw_22495:HG2_Ill_GATKHC_26975:HG2_Ill_Krunchall_22842:HG2_Ill_SpiralSDKrefine_7023:HG2_Ill_manta_4574:HG2_Ill_svaba_21022:HG3_Ill_150bpfermikitraw_21249:HG3_Ill_250bpfermikitraw_21839:HG3_Ill_GATKHCSBGrefine_11102:HG3_Ill_GATKHC_26825:HG3_Ill_Krunchall_22424:HG3_Ill_svaba_21232:HG3_PB_assemblyticsfalcon_11085:HG4_Ill_150bpfermikitraw_21296:HG4_Ill_250bpfermikitraw_22111:HG4_Ill_GATKHCSBGrefine_11532:HG4_Ill_GATKHC_26909:HG4_Ill_Krunchall_23138:HG4_Ill_svaba_20970;NumExactMatchSVs=20;ClusterMaxShiftDist=0.170543;ClusterMaxSizeDiff=0.170543;ClusterMaxEditDist=0.325926;PBcalls=13;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-58;DistBack=-98;DistForward=5899;DistMin=-98;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=202;REFWIDENED=17:79129841-79130100;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1547.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:45:1/1:1:26:1:13:./.:0:15:1:18:1/1:0:51:./.:.:.:.:.:.
chr17	79227511	HG2_Ill_150bpfermikitraw_21212	ATCACCATCATCACCATCTCCATCCCTACCACCATCACCATCATCATCACCG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21212:HG4_PB_pbsv_16951:HG4_PB_assemblyticsfalcon_10887:HG4_Ill_svaba_20974:HG4_Ill_GATKHCSBGrefine_11534:HG4_Ill_250bpfermikitraw_22113:HG4_Ill_150bpfermikitraw_21297:HG2_Ill_svaba_21026:HG2_Ill_GATKHCSBGrefine_11180;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21212:HG4_PB_assemblyticsfalcon_10887:HG4_Ill_svaba_20974:HG4_Ill_GATKHCSBGrefine_11534:HG4_Ill_250bpfermikitraw_22113:HG4_Ill_150bpfermikitraw_21297:HG2_Ill_svaba_21026:HG2_Ill_GATKHCSBGrefine_11180;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0194175;PBcalls=2;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=4165;DistForward=10440;DistMin=4165;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=68;REFWIDENED=17:79227510-79227631;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1548.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:14:0|1:16:4:0:8:1|0:0:11:25:1:0/1:12:6:./.:.:.:.:.:.
chr17	79455402	HG3_Ill_svaba_21238	CCCCGGGGCCTCCGGGATGTTCCGGGGCCGAGTTGTGCCTGTTGCCGTTTCCGGCG	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21216:HG2_PB_assemblyticsfalcon_11118:HG4_PB_assemblyticsfalcon_10894:HG2_Ill_Spiral_1114:HG2_PB_pbsv_17055:HG3_PB_pbsv_16729:HG4_PB_pbsv_16957:HG4_Ill_svaba_20978:HG4_Ill_manta_3876:HG4_Ill_Krunchall_23144:HG4_Ill_GATKHCSBGrefine_11536:HG4_Ill_250bpfermikitraw_22119:HG4_Ill_150bpfermikitraw_21301:HG3_Ill_svaba_21238:HG3_Ill_Krunchall_22429:HG3_Ill_GATKHCSBGrefine_11105:HG3_Ill_250bpfermikitraw_21845:HG3_Ill_150bpfermikitraw_21254:HG3_10X_allpass_3234:HG2_PB_assemblyticsPBcR_10740:HG2_PB_HySA_31031:HG2_Ill_svaba_21028:HG2_Ill_scalpel_15898:HG2_Ill_manta_4577:HG2_Ill_Krunchall_22845:HG2_Ill_GATKHCSBGrefine_11183:HG2_Ill_250bpfermikitraw_22499;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21216:HG4_Ill_svaba_20978:HG4_Ill_manta_3876:HG4_Ill_Krunchall_23144:HG4_Ill_GATKHCSBGrefine_11536:HG4_Ill_250bpfermikitraw_22119:HG4_Ill_150bpfermikitraw_21301:HG3_Ill_svaba_21238:HG3_Ill_Krunchall_22429:HG3_Ill_GATKHCSBGrefine_11105:HG3_Ill_250bpfermikitraw_21845:HG3_Ill_150bpfermikitraw_21254:HG3_10X_allpass_3234:HG2_PB_assemblyticsPBcR_10740:HG2_PB_HySA_31031:HG2_Ill_svaba_21028:HG2_Ill_scalpel_15898:HG2_Ill_manta_4577:HG2_Ill_Krunchall_22845:HG2_Ill_GATKHCSBGrefine_11183:HG2_Ill_250bpfermikitraw_22499;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0550459;PBcalls=7;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-55;DistBack=36216;DistForward=3075;DistMin=3075;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=57;REFWIDENED=17:79455403-79455514;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1549.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:30:./.:2:3:0:2:./.:0:0:0:0:1/1:0:52:./.:.:.:.:.:.
chr17	79577680	HG4_PB_HySA_24793	TAAAATGACACAAACCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11832:HG2_PB_SVrefine2PB10Xhap12_12391:HG4_PB_pbsv_16961:HG3_PB_HySA_25656:HG2_PB_HySA_31036:HG2_PB_assemblyticsfalcon_11121:HG3_Ill_Krunchall_22431:HG2_Ill_Krunchall_22846:HG2_PB_pbsv_17059:HG4_Ill_MetaSV_2110:HG3_Ill_MetaSV_2191:HG2_Ill_tnscope_1816:HG4_PB_HySA_24793:HG4_Ill_manta_3877:HG4_Ill_SVrefine2DISCOVARDovetail_11907:HG4_Ill_GATKHCSBGrefine_11538:HG4_10X_allpass_3075:HG3_PB_pbsv_16734:HG3_PB_SVrefine2PBcRDovetail_8264:HG3_Ill_manta_3729:HG3_Ill_GATKHCSBGrefine_11107:HG3_10X_allpass_3235:HG2_PB_SVrefine2Falcon2Bionano_8406:HG2_PB_SVrefine2Falcon1plusDovetail_4984:HG2_Ill_manta_4579:HG2_Ill_breakscan11_2434:HG2_Ill_SVrefine2DISCOVARplusDovetail_5369:HG2_Ill_GATKHCSBGrefine_11186:HG2_10X_allpass_2628:HG2_PB_assemblyticsPBcR_10744:HG2_PB_SVrefine2PBcRplusDovetail_4574;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11832:HG4_PB_HySA_24793:HG4_Ill_manta_3877:HG4_Ill_SVrefine2DISCOVARDovetail_11907:HG4_Ill_GATKHCSBGrefine_11538:HG4_10X_allpass_3075:HG3_PB_pbsv_16734:HG3_PB_SVrefine2PBcRDovetail_8264:HG3_Ill_manta_3729:HG3_Ill_GATKHCSBGrefine_11107:HG3_10X_allpass_3235:HG2_PB_SVrefine2Falcon2Bionano_8406:HG2_PB_SVrefine2Falcon1plusDovetail_4984:HG2_Ill_manta_4579:HG2_Ill_breakscan11_2434:HG2_Ill_SVrefine2DISCOVARplusDovetail_5369:HG2_Ill_GATKHCSBGrefine_11186:HG2_10X_allpass_2628;NumExactMatchSVs=18;ClusterMaxShiftDist=0.324675;ClusterMaxSizeDiff=0.324675;ClusterMaxEditDist=0.324675;PBcalls=13;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=-1197;DistForward=-308;DistMin=-1197;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=17:79577681-79578019;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1550.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:./.:21:11:7:20:1|0:0:27:35:1:0/1:32:21:0/1:31:14:.:.:.
chr17	79619828	HG2_Ill_GATKHCSBGrefine_11189	TCGCGATCCTAGGGGGCTACTTTGGCAGGTATTAAAACTTTTTTTTAGGCCGGG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21219:HG4_PB_pbsv_16963:HG4_Ill_svaba_20983:HG4_Ill_manta_3878:HG4_Ill_Krunchall_23151:HG4_Ill_GATKHC_26920:HG4_Ill_GATKHCSBGrefine_11540:HG4_Ill_250bpfermikitraw_22122:HG4_Ill_150bpfermikitraw_21306:HG4_10X_allpass_3078:HG3_PB_pbsv_16736:HG3_Ill_svaba_21243:HG3_Ill_manta_3731:HG3_Ill_Spiral_17405:HG3_Ill_Krunchall_22434:HG3_Ill_GATKHC_26837:HG3_Ill_GATKHCSBGrefine_11109:HG3_Ill_250bpfermikitraw_21849:HG3_Ill_150bpfermikitraw_21256:HG2_Ill_svaba_21032:HG2_Ill_manta_4580:HG2_Ill_Krunchall_22850:HG2_Ill_GATKHC_26989:HG2_Ill_GATKHCSBGrefine_11189:HG2_Ill_250bpfermikitraw_22502;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21219:HG4_Ill_svaba_20983:HG4_Ill_manta_3878:HG4_Ill_Krunchall_23151:HG4_Ill_GATKHC_26920:HG4_Ill_GATKHCSBGrefine_11540:HG4_Ill_250bpfermikitraw_22122:HG4_Ill_150bpfermikitraw_21306:HG4_10X_allpass_3078:HG3_PB_pbsv_16736:HG3_Ill_svaba_21243:HG3_Ill_manta_3731:HG3_Ill_Spiral_17405:HG3_Ill_Krunchall_22434:HG3_Ill_GATKHC_26837:HG3_Ill_GATKHCSBGrefine_11109:HG3_Ill_250bpfermikitraw_21849:HG3_Ill_150bpfermikitraw_21256:HG2_Ill_svaba_21032:HG2_Ill_manta_4580:HG2_Ill_Krunchall_22850:HG2_Ill_GATKHC_26989:HG2_Ill_GATKHCSBGrefine_11189:HG2_Ill_250bpfermikitraw_22502;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0186916;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0186916;PBcalls=2;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-53;DistBack=8412;DistForward=5322;DistMin=5322;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=17:79619829-79619886;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1551.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:21:0|1:34:6:2:13:0|1:32:0:0:13:0/1:20:12:./.:.:.:.:.:.
chr17	80039760	HG3_Ill_GATKHCSBGrefine_11111	CGGGGTGGGGAGTGGCCACTGGGAGAGGGTGGGGTGGGCAGGGCTGCGGGGAGAAGGTG	C	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_12155:HG3_PB_HySA_25661:HG4_Ill_Cortex_1463:HG3_PB_pbsv_16741:HG3_PB_assemblyticsfalcon_11105:HG3_Ill_svaba_21249:HG3_Ill_scalpel_16245:HG3_Ill_Krunchall_22438:HG3_Ill_GATKHC_26843:HG3_Ill_GATKHCSBGrefine_11111:HG3_Ill_Cortex_1524:HG3_Ill_250bpfermikitraw_21857:HG3_Ill_150bpfermikitraw_21263:HG2_Ill_svaba_21036:HG2_Ill_scalpel_15904:HG2_Ill_Krunchall_22853:HG2_Ill_GATKHC_26993:HG2_Ill_GATKHCSBGrefine_11191:HG2_Ill_Cortex_3558:HG2_Ill_250bpfermikitraw_22506:HG2_Ill_150bpfermikitraw_21223:HG2_PB_pbsv_17062:HG2_Ill_breakscan11_2437:HG3_PB_SVrefine2PBcRDovetail_8267;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21223:HG2_Ill_250bpfermikitraw_22506:HG2_Ill_Cortex_3558:HG2_Ill_GATKHCSBGrefine_11191:HG2_Ill_GATKHC_26993:HG2_Ill_Krunchall_22853:HG2_Ill_scalpel_15904:HG2_Ill_svaba_21036:HG3_Ill_150bpfermikitraw_21263:HG3_Ill_250bpfermikitraw_21857:HG3_Ill_Cortex_1524:HG3_Ill_GATKHCSBGrefine_11111:HG3_Ill_GATKHC_26843:HG3_Ill_Krunchall_22438:HG3_Ill_scalpel_16245:HG3_Ill_svaba_21249:HG3_PB_assemblyticsfalcon_11105:HG3_PB_pbsv_16741:HG4_Ill_Cortex_1463;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0526316;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.156522;PBcalls=5;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=13;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=9892;DistForward=40468;DistMin=9892;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=85;REFWIDENED=17:80039737-80039879;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1552.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:13:0|1:26:1:3:11:./.:0:5:13:0:0/1:25:20:./.:.:.:.:.:.
chr17	80118203	HG3_Ill_GATKHC_26844	AAGACAGGCCAGGTGCAGTGACTCATACCTGTAATGCCAGCACTTTGGGAGGC	A	20	PASS	ClusterIDs=HG2_PB_HySA_31047:HG2_PB_assemblyticsPBcR_10747:HG3_PB_assemblyticsfalcon_11108:HG4_PB_assemblyticsfalcon_10907:HG4_PB_HySA_24799:HG3_PB_pbsv_16746:HG2_PB_pbsv_17067:HG4_PB_pbsv_16968:HG4_Ill_svaba_20988:HG4_Ill_scalpel_15520:HG4_Ill_GATKHC_26924:HG4_Ill_GATKHCSBGrefine_11542:HG4_Ill_250bpfermikitraw_22126:HG3_Ill_svaba_21251:HG3_Ill_scalpel_16246:HG3_Ill_GATKHC_26844:HG3_Ill_GATKHCSBGrefine_11116:HG3_Ill_150bpfermikitraw_21264:HG2_Ill_svaba_21038:HG2_Ill_scalpel_15905:HG2_Ill_GATKHC_26994:HG2_Ill_GATKHCSBGrefine_11192:HG2_Ill_250bpfermikitraw_22507:HG2_Ill_150bpfermikitraw_21225:HG3_PB_HySA_25667;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21225:HG2_Ill_250bpfermikitraw_22507:HG2_Ill_GATKHCSBGrefine_11192:HG2_Ill_GATKHC_26994:HG2_Ill_scalpel_15905:HG2_Ill_svaba_21038:HG3_Ill_150bpfermikitraw_21264:HG3_Ill_GATKHCSBGrefine_11116:HG3_Ill_GATKHC_26844:HG3_Ill_scalpel_16246:HG3_Ill_svaba_21251:HG4_Ill_250bpfermikitraw_22126:HG4_Ill_GATKHCSBGrefine_11542:HG4_Ill_GATKHC_26924:HG4_Ill_scalpel_15520:HG4_Ill_svaba_20988;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0560748;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.209524;PBcalls=9;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-52;DistBack=8876;DistForward=-53;DistMin=-53;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=263;REFWIDENED=17:80118204-80118518;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1553.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:49:1/1:1:5:2:30:./.:0:9:0:0:1/1:1:31:./.:.:.:.:.:.
chr17	80120590	HG4_Ill_150bpfermikitraw_21310	CACACACGCCCCACTGACCAGGACCCCTCTGAGCGGGCAGGTGGCATCGGGCAGCCCGCACACACGCCCCACTGACCAGGACCCCTCTGAGCGGGCAGGTGGCATCGGGCAGCCCGCA	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10544:HG4_PB_SVrefine2PBcRDovetail_8524:HG4_Ill_SVrefine2DISCOVARDovetail_11910:HG4_Ill_GATKHCSBGrefine_11543:HG4_Ill_250bpfermikitraw_22127:HG4_Ill_150bpfermikitraw_21310:HG3_PB_SVrefine2PBcRDovetail_8268:HG3_Ill_SVrefine2DISCOVARDovetail_12156:HG3_Ill_150bpfermikitraw_21265:HG2_PB_assemblyticsPBcR_10748:HG2_PB_SVrefine2PBcRplusDovetail_4577:HG2_PB_SVrefine2PB10Xhap12_12394:HG2_PB_SVrefine2Falcon2Bionano_8408:HG2_Ill_SVrefine2DISCOVARplusDovetail_5374:HG2_Ill_GATKHCSBGrefine_11193:HG2_Ill_250bpfermikitraw_22508:HG2_Ill_150bpfermikitraw_21226:HG2_PB_HySA_31048:HG3_PB_pbsv_16747:HG2_PB_pbsv_17068:HG4_PB_pbsv_16969:HG4_PB_SVrefine2Falcon1Dovetail_10562;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21226:HG2_Ill_250bpfermikitraw_22508:HG2_Ill_GATKHCSBGrefine_11193:HG2_Ill_SVrefine2DISCOVARplusDovetail_5374:HG2_PB_SVrefine2Falcon2Bionano_8408:HG2_PB_SVrefine2PB10Xhap12_12394:HG2_PB_SVrefine2PBcRplusDovetail_4577:HG2_PB_assemblyticsPBcR_10748:HG3_Ill_150bpfermikitraw_21265:HG3_Ill_SVrefine2DISCOVARDovetail_12156:HG3_PB_SVrefine2PBcRDovetail_8268:HG4_Ill_150bpfermikitraw_21310:HG4_Ill_250bpfermikitraw_22127:HG4_Ill_GATKHCSBGrefine_11543:HG4_Ill_SVrefine2DISCOVARDovetail_11910:HG4_PB_SVrefine2PBcRDovetail_8524;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0255319;ClusterMaxSizeDiff=0.0255319;ClusterMaxEditDist=0.0255319;PBcalls=12;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-117;DistBack=-95;DistForward=-60;DistMin=-95;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=256;REFWIDENED=17:80120430-80120802;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1554.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:1/1:1:4:1:20:./.:0:4:0:0:1/1:0:24:./.:.:.:.:.:.
chr17	80555941	HG3_Ill_250bpfermikitraw_21871	ACATCCGTCATCTCATTGACCATTTCTAGGTGTTGGGAACCTTCTGGCTGTTTGAAACCGTATTGTTGACTCCCATCATCTCGCAGTG	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_11124:HG2_PB_pbsv_17081:HG3_PB_SVrefine2PBcRDovetail_8273:HG3_Ill_svaba_21267:HG3_Ill_manta_3739:HG3_Ill_Krunchall_22447:HG3_Ill_GATKHC_26861:HG3_Ill_GATKHCSBGrefine_11125:HG3_Ill_Cortex_1525:HG3_Ill_250bpfermikitraw_21871:HG3_Ill_150bpfermikitraw_21274:HG2_PB_SVrefine2PB10Xhap12_12400:HG2_PB_SVrefine2Falcon2Bionano_8413:HG2_Ill_svaba_21056:HG2_Ill_breakscan11_2441:HG2_Ill_SpiralSDKrefine_7038:HG2_Ill_Krunchall_22863:HG2_Ill_GATKHC_27013:HG2_Ill_GATKHCSBGrefine_11204:HG2_Ill_Cortex_3561:HG2_Ill_250bpfermikitraw_22520:HG2_Ill_150bpfermikitraw_21235:HG2_10X_allpass_2630:HG2_10X_SVrefine210Xhap12_11857:HG3_PB_pbsv_16757;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11857:HG2_10X_allpass_2630:HG2_Ill_150bpfermikitraw_21235:HG2_Ill_250bpfermikitraw_22520:HG2_Ill_Cortex_3561:HG2_Ill_GATKHCSBGrefine_11204:HG2_Ill_GATKHC_27013:HG2_Ill_Krunchall_22863:HG2_Ill_SpiralSDKrefine_7038:HG2_Ill_breakscan11_2441:HG2_Ill_svaba_21056:HG2_PB_SVrefine2Falcon2Bionano_8413:HG2_PB_SVrefine2PB10Xhap12_12400:HG3_Ill_150bpfermikitraw_21274:HG3_Ill_250bpfermikitraw_21871:HG3_Ill_Cortex_1525:HG3_Ill_GATKHCSBGrefine_11125:HG3_Ill_GATKHC_26861:HG3_Ill_Krunchall_22447:HG3_Ill_manta_3739:HG3_Ill_svaba_21267:HG3_PB_SVrefine2PBcRDovetail_8273;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0584795;ClusterMaxSizeDiff=0.0584795;ClusterMaxEditDist=0.105263;PBcalls=6;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-87;DistBack=1517;DistForward=-80;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=17:80555942-80556029;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1556.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:19:0|1:27:0:0:15:0|1:17:0:0:8:0/1:29:18:./.:.:.:.:.:.
chr17	80674389	HG2_Ill_GATKHC_27019	ACCCAATCCCCCGCGCCTACCTGCCTCCCGGCCCCTCCCCTTCCCGCCCCTCAATCCCAGCGCTCATCTCTGCGGCCACGC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_16766:HG2_Ill_Spiral_1116:HG3_Ill_svaba_21273:HG3_Ill_scalpel_16254:HG3_Ill_manta_3741:HG3_Ill_Krunchall_22452:HG3_Ill_GATKHC_26869:HG3_Ill_GATKHCSBGrefine_11130:HG3_Ill_250bpfermikitraw_21877:HG3_Ill_150bpfermikitraw_21280:HG3_CG_vcfBeta_9162:HG3_10X_allpass_3238:HG2_PB_pbsv_17091:HG2_PB_assemblyticsfalcon_11159:HG2_Ill_svaba_21062:HG2_Ill_manta_4583:HG2_Ill_breakscan11_2442:HG2_Ill_SpiralSDKrefine_7041:HG2_Ill_SVrefine2DISCOVARplusDovetail_5382:HG2_Ill_Krunchall_22867:HG2_Ill_GATKHC_27019:HG2_Ill_GATKHCSBGrefine_11209:HG2_Ill_250bpfermikitraw_22525:HG2_10X_allpass_2631:HG3_Ill_svaba_21272:HG2_Ill_svaba_21061:HG2_PB_PB10Xdip_13798;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_2631:HG2_Ill_250bpfermikitraw_22525:HG2_Ill_GATKHCSBGrefine_11209:HG2_Ill_GATKHC_27019:HG2_Ill_Krunchall_22867:HG2_Ill_SVrefine2DISCOVARplusDovetail_5382:HG2_Ill_SpiralSDKrefine_7041:HG2_Ill_breakscan11_2442:HG2_Ill_manta_4583:HG2_Ill_svaba_21062:HG2_PB_assemblyticsfalcon_11159:HG2_PB_pbsv_17091:HG3_10X_allpass_3238:HG3_CG_vcfBeta_9162:HG3_Ill_150bpfermikitraw_21280:HG3_Ill_250bpfermikitraw_21877:HG3_Ill_GATKHCSBGrefine_11130:HG3_Ill_GATKHC_26869:HG3_Ill_Krunchall_22452:HG3_Ill_manta_3741:HG3_Ill_scalpel_16254:HG3_Ill_svaba_21273;NumExactMatchSVs=22;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.143646;PBcalls=4;Illcalls=20;TenXcalls=2;CGcalls=1;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=1;HG2count=15;HG3count=12;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-80;DistBack=3194;DistForward=13047;DistMin=3194;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=17:80674390-80674471;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1557.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:9:0|1:23:1:1:8:0|1:26:0:0:14:0/1:32:29:./.:.:.:.:.:.
chr17	80856031	HG2_PB_SVrefine2PBcRplusDovetail_4589	GTGGGTTTTGGTGGGAGCACACGGCACGGCTCTGGGTTTTGGTGGGAGCACACGGCACGGCTC	G	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_11151:HG4_PB_pbsv_16999:HG2_PB_pbsv_17103:HG4_PB_SVrefine2PBcRDovetail_8536:HG4_PB_SVrefine2Falcon1Dovetail_10575:HG4_Ill_SVrefine2DISCOVARDovetail_11924:HG4_Ill_250bpfermikitraw_22151:HG2_PB_assemblyticsfalcon_11172:HG2_PB_SVrefine2PBcRplusDovetail_4589:HG2_PB_SVrefine2PB10Xhap12_12410:HG2_PB_SVrefine2Falcon2Bionano_8420;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8420:HG2_PB_SVrefine2PB10Xhap12_12410:HG2_PB_SVrefine2PBcRplusDovetail_4589:HG2_PB_assemblyticsfalcon_11172:HG4_Ill_250bpfermikitraw_22151:HG4_Ill_SVrefine2DISCOVARDovetail_11924:HG4_PB_SVrefine2Falcon1Dovetail_10575:HG4_PB_SVrefine2PBcRDovetail_8536;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0625;ClusterMaxSizeDiff=0.0625;ClusterMaxEditDist=0.0625;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=-32;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=179;REFWIDENED=17:80856032-80856272;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1559.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:31:1|0:0:29:26:2:./.:0:1:0:0:./.:1:4:./.:.:.:.:.:.
chr17	80883779	HG3_PB_SVrefine2PBcRDovetail_8278	TGGCCGTGGAGAGGCTGGAGGTGACCTCTCCCCGGGTGTCCTTCCTGGGTTGTACTGGGGGCCGTGGAGAGGCTGGAGGTGACCTCTCCCCGGGTGTCCTTCCTGGGTTGTACTGGGGGCCGTGGAGAGGCTGGAGGTGACCTCTCCCCGGGTGTCCTTCCTGGGTTGTACTGGG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5388:HG2_PB_pbsv_17106:HG4_PB_pbsv_17002:HG3_PB_pbsv_16780:HG2_10X_SVrefine210Xhap12_11872:HG4_PB_SVrefine2PBcRDovetail_8537:HG4_PB_SVrefine2Falcon1Dovetail_10576:HG4_Ill_SVrefine2DISCOVARDovetail_11925:HG3_PB_SVrefine2PBcRDovetail_8278:HG3_PB_SVrefine2Falcon1Dovetail_10558:HG3_Ill_SVrefine2DISCOVARDovetail_12164:HG2_PB_SVrefine2PBcRplusDovetail_4590:HG2_PB_SVrefine2PB10Xhap12_12412:HG2_PB_SVrefine2Falcon2Bionano_8421:HG2_PB_SVrefine2Falcon1plusDovetail_5000:HG2_Ill_SpiralSDKrefine_7046;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5388:HG4_PB_SVrefine2PBcRDovetail_8537:HG4_PB_SVrefine2Falcon1Dovetail_10576:HG4_Ill_SVrefine2DISCOVARDovetail_11925:HG3_PB_SVrefine2PBcRDovetail_8278:HG3_PB_SVrefine2Falcon1Dovetail_10558:HG3_Ill_SVrefine2DISCOVARDovetail_12164:HG2_PB_SVrefine2PBcRplusDovetail_4590:HG2_PB_SVrefine2PB10Xhap12_12412:HG2_PB_SVrefine2Falcon2Bionano_8421:HG2_PB_SVrefine2Falcon1plusDovetail_5000:HG2_Ill_SpiralSDKrefine_7046;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0574713;ClusterMaxSizeDiff=0.0573066;ClusterMaxEditDist=0.0632184;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-174;DistBack=12317;DistForward=-6;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=183;REFWIDENED=17:80883780-80884136;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1560.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:3:23:0:26:1/1:0:9:0:6:1/1:0:27:./.:.:.:.:.:.
chr17	80969740	HG2_PB_SVrefine2Falcon2Bionano_8424	ATCCCAGCTCGTTTGAACACACGCCACGAACTCCTGGTATCCGTAAGTATCCCAGCTCGTTTGAACACACGCCACGAACTCCTCGTATCCATAAGTATCCCAGCTCGTTTGAACACACGCCACGAACTCCTCGTATCCATAAGTCTCCCAGCTCGTTTGAACACACGCCACGAACTCCTCGTATCCATAAGTC	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5390:HG2_PB_HySA_31115:HG2_PB_pbsv_17118:HG3_PB_pbsv_16790:HG4_PB_pbsv_17013:HG4_PB_SVrefine2PBcRDovetail_8540:HG4_PB_SVrefine2Falcon1Dovetail_10581:HG4_Ill_SVrefine2DISCOVARDovetail_11927:HG3_PB_SVrefine2PBcRDovetail_8284:HG3_PB_SVrefine2Falcon1Dovetail_10563:HG2_PB_SVrefine2PBcRplusDovetail_4598:HG2_PB_SVrefine2PB10Xhap12_12417:HG2_PB_SVrefine2Falcon2Bionano_8424:HG2_PB_SVrefine2Falcon1plusDovetail_5007;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5390:HG4_PB_SVrefine2PBcRDovetail_8540:HG4_PB_SVrefine2Falcon1Dovetail_10581:HG4_Ill_SVrefine2DISCOVARDovetail_11927:HG3_PB_SVrefine2PBcRDovetail_8284:HG3_PB_SVrefine2Falcon1Dovetail_10563:HG2_PB_SVrefine2PBcRplusDovetail_4598:HG2_PB_SVrefine2PB10Xhap12_12417:HG2_PB_SVrefine2Falcon2Bionano_8424:HG2_PB_SVrefine2Falcon1plusDovetail_5007;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00520833;ClusterMaxSizeDiff=0.00519481;ClusterMaxEditDist=0.0260417;PBcalls=12;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-192;DistBack=7183;DistForward=-97;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=269;REFWIDENED=17:80969741-80970201;PctSeqSimilarity=0.9794;PctSizeSimilarity=1;PctRecOverlap=0.5026;SizeDiff=0;StartDistance=-96;EndDistance=-96;GTMatch=0;TruScore=82;MatchId=1561.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:61:1/1:1:23:3:32:./.:9:0:8:1:0/0:19:1:./.:.:.:.:.:.
chr17	80993703	HG4_Ill_Krunchall_23180	GGCTGGTGGAGGTCACTGAGGTAGACCCTCGGAGGGCGGTTTGCACGTGTGTGATGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11876:HG4_PB_HySA_24860:HG2_PB_HySA_31118:HG4_Ill_GATKHC_26972:HG4_Ill_GATKHCSBGrefine_11567:HG2_Ill_GATKHC_27044:HG2_Ill_GATKHCSBGrefine_11222:HG2_Ill_SpiralSDKrefine_7056:HG4_Ill_Spiral_1324:HG2_Ill_Spiral_1118:HG2_PB_pbsv_17120:HG4_PB_pbsv_17021:HG4_Ill_svaba_21025:HG4_Ill_Krunchall_23180:HG4_Ill_250bpfermikitraw_22161:HG2_Ill_svaba_21079:HG2_Ill_Krunchall_22878:HG2_Ill_250bpfermikitraw_22540:HG2_Ill_150bpfermikitraw_21253;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21253:HG2_Ill_250bpfermikitraw_22540:HG2_Ill_Krunchall_22878:HG2_Ill_svaba_21079:HG4_Ill_250bpfermikitraw_22161:HG4_Ill_Krunchall_23180:HG4_Ill_svaba_21025;NumExactMatchSVs=7;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.186916;PBcalls=4;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=-56;DistBack=3316;DistForward=14;DistMin=14;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=88;REFWIDENED=17:80993689-80993832;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1562.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:19:0|1:22:2:2:15:./.:0:4:7:1:0/1:35:17:./.:.:.:.:.:.
chr18	596803	HG2_PB_assemblyticsPBcR_10813	TCCCGCCCACCCGGCGTCTGCAGGCCCCGCCCACCCGGCGTCACCTGCAGGC	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_10985:HG4_Ill_GATKHCSBGrefine_11586:HG2_Ill_GATKHCSBGrefine_11233:HG2_PB_pbsv_17145:HG4_PB_pbsv_17046:HG4_Ill_250bpfermikitraw_22172:HG2_PB_assemblyticsfalcon_11194:HG2_PB_assemblyticsPBcR_10813:HG2_PB_HySA_31157:HG2_Ill_250bpfermikitraw_22549;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22549:HG2_PB_HySA_31157:HG2_PB_assemblyticsPBcR_10813:HG2_PB_assemblyticsfalcon_11194:HG4_Ill_250bpfermikitraw_22172;NumExactMatchSVs=5;ClusterMaxShiftDist=0.08;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.142857;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=-67;DistForward=11;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=191;REFWIDENED=18:596768-597009;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1565.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:12:62:1/1:9:35:2:19:./.:0:2:0:2:./.:0:7:./.:.:.:.:.:.
chr18	837103	HG4_PB_SVrefine2Falcon1Dovetail_10601	TGTGCCACATTTTCTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11894:HG4_PB_assemblyticsfalcon_10991:HG2_PB_assemblyticsfalcon_11199:HG2_PB_assemblyticsPBcR_10818:HG3_PB_assemblyticsfalcon_11185:HG4_PB_pbsv_17049:HG3_PB_pbsv_16826:HG4_PB_HySA_24888:HG3_Ill_MetaSV_2202:HG4_PB_SVrefine2PBcRDovetail_8559:HG4_PB_SVrefine2Falcon1Dovetail_10601:HG4_Ill_MetaSV_2121:HG4_Ill_GATKHCSBGrefine_11587:HG3_PB_SVrefine2PBcRDovetail_8303:HG3_PB_SVrefine2Falcon1Dovetail_10590:HG3_Ill_GATKHCSBGrefine_11159:HG2_PB_pbsv_17148:HG2_PB_SVrefine2PBcRplusDovetail_4617:HG2_PB_SVrefine2PB10Xhap12_12440:HG2_PB_SVrefine2Falcon2Bionano_8446:HG2_PB_SVrefine2Falcon1plusDovetail_5028:HG2_PB_HySA_31168:HG2_Ill_MetaSV_2061:HG2_Ill_GATKHCSBGrefine_11235;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11894:HG4_PB_SVrefine2PBcRDovetail_8559:HG4_PB_SVrefine2Falcon1Dovetail_10601:HG4_Ill_MetaSV_2121:HG4_Ill_GATKHCSBGrefine_11587:HG3_PB_SVrefine2PBcRDovetail_8303:HG3_PB_SVrefine2Falcon1Dovetail_10590:HG3_Ill_GATKHCSBGrefine_11159:HG2_PB_pbsv_17148:HG2_PB_SVrefine2PBcRplusDovetail_4617:HG2_PB_SVrefine2PB10Xhap12_12440:HG2_PB_SVrefine2Falcon2Bionano_8446:HG2_PB_SVrefine2Falcon1plusDovetail_5028:HG2_PB_HySA_31168:HG2_Ill_MetaSV_2061:HG2_Ill_GATKHCSBGrefine_11235;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0938511;ClusterMaxSizeDiff=0.0938511;ClusterMaxEditDist=0.0938511;PBcalls=17;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=8933;DistForward=5913;DistMin=5913;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=18:837104-837434;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1566.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:41:1/1:1:26:1:5:./.:0:0:0:1:0/1:3:18:0/1:2:11:.:.:.
chr18	1219389	HG3_Ill_250bpfermikitraw_21917	ATGCAGCCAGGGCATTGGTGTTTTTAAAAACACCAACTTCCCTTGTGGTGTTAATG	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_11192:HG4_PB_pbsv_17052:HG3_PB_pbsv_16830:HG2_PB_pbsv_17150:HG2_PB_HySA_31172:HG4_PB_SVrefine2PBcRDovetail_8562:HG4_PB_SVrefine2Falcon1Dovetail_10606:HG4_Ill_svaba_21039:HG4_Ill_scalpel_15543:HG4_Ill_SVrefine2DISCOVARDovetail_11938:HG4_Ill_Krunchall_23199:HG4_Ill_GATKHCSBGrefine_11590:HG4_Ill_250bpfermikitraw_22178:HG4_Ill_150bpfermikitraw_21352:HG3_Ill_svaba_21319:HG3_Ill_scalpel_16279:HG3_Ill_SVrefine2DISCOVARDovetail_12177:HG3_Ill_Krunchall_22484:HG3_Ill_GATKHCSBGrefine_11163:HG3_Ill_250bpfermikitraw_21917:HG3_Ill_150bpfermikitraw_21313:HG2_PB_SVrefine2PBcRplusDovetail_4619:HG2_PB_SVrefine2PB10Xhap12_12442:HG2_PB_SVrefine2Falcon2Bionano_8448:HG2_PB_SVrefine2Falcon1plusDovetail_5031:HG2_Ill_svaba_21099:HG2_Ill_scalpel_15937:HG2_Ill_manta_4584:HG2_Ill_SpiralSDKrefine_7076:HG2_Ill_SVrefine2DISCOVARplusDovetail_5396:HG2_Ill_Krunchall_22895:HG2_Ill_GATKHCSBGrefine_11237:HG2_Ill_250bpfermikitraw_22559:HG2_Ill_150bpfermikitraw_21268:HG2_10X_SVrefine210Xhap12_11896;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11896:HG2_Ill_150bpfermikitraw_21268:HG2_Ill_250bpfermikitraw_22559:HG2_Ill_GATKHCSBGrefine_11237:HG2_Ill_Krunchall_22895:HG2_Ill_SVrefine2DISCOVARplusDovetail_5396:HG2_Ill_SpiralSDKrefine_7076:HG2_Ill_manta_4584:HG2_Ill_scalpel_15937:HG2_Ill_svaba_21099:HG2_PB_SVrefine2Falcon1plusDovetail_5031:HG2_PB_SVrefine2Falcon2Bionano_8448:HG2_PB_SVrefine2PB10Xhap12_12442:HG2_PB_SVrefine2PBcRplusDovetail_4619:HG3_Ill_150bpfermikitraw_21313:HG3_Ill_250bpfermikitraw_21917:HG3_Ill_GATKHCSBGrefine_11163:HG3_Ill_Krunchall_22484:HG3_Ill_SVrefine2DISCOVARDovetail_12177:HG3_Ill_scalpel_16279:HG3_Ill_svaba_21319:HG4_Ill_150bpfermikitraw_21352:HG4_Ill_250bpfermikitraw_22178:HG4_Ill_GATKHCSBGrefine_11590:HG4_Ill_Krunchall_23199:HG4_Ill_SVrefine2DISCOVARDovetail_11938:HG4_Ill_scalpel_15543:HG4_Ill_svaba_21039:HG4_PB_SVrefine2Falcon1Dovetail_10606:HG4_PB_SVrefine2PBcRDovetail_8562;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.0909091;PBcalls=11;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-55;DistBack=0;DistForward=5525;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=64;REFWIDENED=18:1219390-1219508;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1567.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:59:1/1:3:34:2:24:1/1:0:14:0:10:1/1:0:58:./.:.:.:.:.:.
chr18	1720277	HG2_Ill_GATKHC_27079	AATATATAATATATTGTATTATATATTGTATATATAATATATTGTATTATATATTGT	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21279:HG2_PB_HySA_31183:HG4_PB_HySA_24899:HG2_PB_pbsv_17153:HG3_PB_assemblyticsfalcon_11199:HG3_PB_pbsv_16833:HG4_PB_pbsv_17055:HG4_PB_assemblyticsfalcon_11005:HG4_Ill_GATKHCSBGrefine_11593:HG4_Ill_250bpfermikitraw_22188:HG3_Ill_Krunchall_22491:HG3_Ill_GATKHCSBGrefine_11164:HG2_PB_assemblyticsfalcon_11211:HG2_PB_assemblyticsPBcR_10831:HG2_Ill_Krunchall_22901:HG2_Ill_GATKHC_27079:HG2_Ill_GATKHCSBGrefine_11239:HG2_Ill_250bpfermikitraw_22570;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21279:HG4_PB_assemblyticsfalcon_11005:HG4_Ill_GATKHCSBGrefine_11593:HG4_Ill_250bpfermikitraw_22188:HG3_Ill_Krunchall_22491:HG3_Ill_GATKHCSBGrefine_11164:HG2_PB_assemblyticsfalcon_11211:HG2_PB_assemblyticsPBcR_10831:HG2_Ill_Krunchall_22901:HG2_Ill_GATKHC_27079:HG2_Ill_GATKHCSBGrefine_11239:HG2_Ill_250bpfermikitraw_22570;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0357143;PBcalls=9;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=44822;DistForward=41;DistMin=41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=98;REFWIDENED=18:1720276-1720432;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1568.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:59:./.:0:0:0:0:./.:0:1:0:0:1/1:0:12:./.:.:.:.:.:.
chr18	2472723	HG3_Ill_manta_3749	GTCTCTTGCGTTTTTGGCTGTGAAAAGTGGAAGGGCCACATCTCTCTTTCTGGAAAAGGTTTAAAAAATGTGCTACAAAGGAATTATTTATTTGGGATTTTGGTCTTGTATGATA	G	20	PASS	ClusterIDs=HG3_PB_HySA_25772:HG2_PB_HySA_31194:HG2_PB_HySA_31193:HG3_PB_assemblyticsfalcon_11208:HG4_PB_pbsv_17062:HG4_PB_assemblyticsfalcon_11015:HG4_PB_SVrefine2PBcRDovetail_8568:HG4_PB_SVrefine2Falcon1Dovetail_10612:HG4_Ill_svaba_21053:HG4_Ill_scalpel_15553:HG4_Ill_manta_3890:HG4_Ill_SVrefine2DISCOVARDovetail_11944:HG4_Ill_MetaSV_2125:HG4_Ill_GATKHC_27016:HG4_Ill_GATKHCSBGrefine_11601:HG4_Ill_250bpfermikitraw_22197:HG4_Ill_150bpfermikitraw_21370:HG4_CG_vcfBeta_10701:HG4_10X_allpass_3089:HG3_PB_SVrefine2PBcRDovetail_8311:HG3_PB_SVrefine2Falcon1Dovetail_10600:HG3_Ill_svaba_21332:HG3_Ill_scalpel_16288:HG3_Ill_manta_3749:HG3_Ill_SVrefine2DISCOVARDovetail_12186:HG3_Ill_MetaSV_2208:HG3_Ill_GATKHC_26955:HG3_Ill_GATKHCSBGrefine_11169:HG3_Ill_250bpfermikitraw_21931:HG3_Ill_150bpfermikitraw_21327:HG3_CG_vcfBeta_9183:HG3_10X_allpass_3245:HG2_PB_pbsv_17160:HG2_PB_assemblyticsfalcon_11219:HG2_PB_assemblyticsPBcR_10838:HG2_PB_SVrefine2PBcRplusDovetail_4625:HG2_PB_SVrefine2PB10Xhap12_12449:HG2_PB_SVrefine2Falcon2Bionano_8453:HG2_PB_SVrefine2Falcon1plusDovetail_5037:HG2_Ill_svaba_21113:HG2_Ill_scalpel_15946:HG2_Ill_manta_4587:HG2_Ill_SpiralSDKrefine_7085:HG2_Ill_SVrefine2DISCOVARplusDovetail_5405:HG2_Ill_MetaSV_2064:HG2_Ill_GATKHC_27085:HG2_Ill_GATKHCSBGrefine_11247:HG2_Ill_250bpfermikitraw_22576:HG2_Ill_150bpfermikitraw_21286:HG2_CG_vcfBeta_9686:HG2_10X_allpass_2634:HG2_10X_SVrefine210Xhap12_11905:HG2_Ill_breakscan11_2450:HG3_PB_pbsv_16838;NumClusterSVs=54;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11905:HG2_10X_allpass_2634:HG2_CG_vcfBeta_9686:HG2_Ill_150bpfermikitraw_21286:HG2_Ill_250bpfermikitraw_22576:HG2_Ill_GATKHCSBGrefine_11247:HG2_Ill_GATKHC_27085:HG2_Ill_MetaSV_2064:HG2_Ill_SVrefine2DISCOVARplusDovetail_5405:HG2_Ill_SpiralSDKrefine_7085:HG2_Ill_manta_4587:HG2_Ill_scalpel_15946:HG2_Ill_svaba_21113:HG2_PB_SVrefine2Falcon1plusDovetail_5037:HG2_PB_SVrefine2Falcon2Bionano_8453:HG2_PB_SVrefine2PB10Xhap12_12449:HG2_PB_SVrefine2PBcRplusDovetail_4625:HG2_PB_assemblyticsPBcR_10838:HG2_PB_assemblyticsfalcon_11219:HG2_PB_pbsv_17160:HG3_10X_allpass_3245:HG3_CG_vcfBeta_9183:HG3_Ill_150bpfermikitraw_21327:HG3_Ill_250bpfermikitraw_21931:HG3_Ill_GATKHCSBGrefine_11169:HG3_Ill_GATKHC_26955:HG3_Ill_MetaSV_2208:HG3_Ill_SVrefine2DISCOVARDovetail_12186:HG3_Ill_manta_3749:HG3_Ill_scalpel_16288:HG3_Ill_svaba_21332:HG3_PB_SVrefine2Falcon1Dovetail_10600:HG3_PB_SVrefine2PBcRDovetail_8311:HG4_10X_allpass_3089:HG4_CG_vcfBeta_10701:HG4_Ill_150bpfermikitraw_21370:HG4_Ill_250bpfermikitraw_22197:HG4_Ill_GATKHCSBGrefine_11601:HG4_Ill_GATKHC_27016:HG4_Ill_MetaSV_2125:HG4_Ill_SVrefine2DISCOVARDovetail_11944:HG4_Ill_manta_3890:HG4_Ill_scalpel_15553:HG4_Ill_svaba_21053:HG4_PB_SVrefine2Falcon1Dovetail_10612:HG4_PB_SVrefine2PBcRDovetail_8568:HG4_PB_assemblyticsfalcon_11015:HG4_PB_pbsv_17062;NumExactMatchSVs=48;ClusterMaxShiftDist=0.0173913;ClusterMaxSizeDiff=0.0173913;ClusterMaxEditDist=0.025974;PBcalls=18;Illcalls=29;TenXcalls=4;CGcalls=3;PBexactcalls=13;Illexactcalls=28;TenXexactcalls=4;CGexactcalls=3;HG2count=23;HG3count=16;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-114;DistBack=-44;DistForward=1447;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=18:2472724-2472838;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1569.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:51:1/1:1:11:0:6:1/1:0:23:0:22:1/1:0:21:./.:.:.:.:.:.
chr18	2614471	HG2_Ill_manta_4588	AAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAATA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5038:HG4_PB_HySA_24905:HG4_PB_SVrefine2PBcRDovetail_8569:HG4_PB_assemblyticsfalcon_11016:HG4_PB_SVrefine2Falcon1Dovetail_10613:HG4_Ill_manta_3891:HG4_Ill_SVrefine2DISCOVARDovetail_11946:HG3_PB_SVrefine2PBcRDovetail_8312:HG3_PB_SVrefine2Falcon1Dovetail_10601:HG3_Ill_SVrefine2DISCOVARDovetail_12188:HG2_PB_assemblyticsPBcR_10839:HG2_PB_SVrefine2PBcRplusDovetail_4626:HG2_PB_SVrefine2PB10Xhap12_12450:HG2_PB_SVrefine2Falcon2Bionano_8454:HG2_Ill_manta_4588:HG2_Ill_SVrefine2DISCOVARplusDovetail_5406:HG2_10X_SVrefine210Xhap12_11906:HG3_Ill_MetaSV_2209:HG4_Ill_Spiral_1329:HG3_Ill_Spiral_17456:HG2_Ill_Spiral_1121:HG3_10X_allpass_3246:HG4_Ill_Krunchall_23215:HG4_Ill_GATKHC_27017:HG4_Ill_GATKHCSBGrefine_11602:HG3_Ill_GATKHC_26956:HG3_Ill_GATKHCSBGrefine_11170:HG2_Ill_GATKHC_27086:HG2_Ill_GATKHCSBGrefine_11248:HG3_PB_assemblyticsfalcon_11209:HG2_PB_pbsv_17161:HG4_PB_pbsv_17063:HG3_PB_pbsv_16839:HG3_PB_HySA_25773:HG2_PB_HySA_31195;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11906:HG2_Ill_SVrefine2DISCOVARplusDovetail_5406:HG2_Ill_manta_4588:HG2_PB_SVrefine2Falcon2Bionano_8454:HG2_PB_SVrefine2PB10Xhap12_12450:HG2_PB_SVrefine2PBcRplusDovetail_4626:HG2_PB_assemblyticsPBcR_10839:HG3_Ill_SVrefine2DISCOVARDovetail_12188:HG3_PB_SVrefine2Falcon1Dovetail_10601:HG3_PB_SVrefine2PBcRDovetail_8312:HG4_Ill_SVrefine2DISCOVARDovetail_11946:HG4_Ill_manta_3891:HG4_PB_SVrefine2Falcon1Dovetail_10613:HG4_PB_assemblyticsfalcon_11016;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0432432;ClusterMaxSizeDiff=0.0432432;ClusterMaxEditDist=0.0543478;PBcalls=17;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-186;DistBack=-150;DistForward=-2;DistMin=-150;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=18:2614435-2614652;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9946;PctRecOverlap=0.9893;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1570.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:67:1/1:1:30:0:33:1/1:0:14:0:16:1/1:0:50:./.:.:.:.:.:.
chr18	2997376	HG2_Ill_svaba_21117	CAGCCTCCCAAAGTGCTGGGATTACAAGCATGAGCCACTGCACCTGGCAGAGGCTTGTATTTTTCTAAACATAACAAATTCA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_17162:HG2_PB_HySA_31199:HG3_Ill_svaba_21334:HG3_Ill_Krunchall_22500:HG3_Ill_GATKHC_26958:HG3_Ill_GATKHCSBGrefine_11171:HG3_Ill_250bpfermikitraw_21934:HG3_Ill_150bpfermikitraw_21330:HG3_10X_allpass_3247:HG2_PB_assemblyticsfalcon_11223:HG2_PB_assemblyticsPBcR_10841:HG2_Ill_svaba_21117:HG2_Ill_manta_4589:HG2_Ill_SpiralSDKrefine_7088:HG2_Ill_Krunchall_22912:HG2_Ill_GATKHC_27092:HG2_Ill_GATKHCSBGrefine_11249:HG2_Ill_250bpfermikitraw_22581:HG2_Ill_150bpfermikitraw_21293:HG3_PB_pbsv_16840:HG2_Ill_breakscan11_2451;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21293:HG2_Ill_250bpfermikitraw_22581:HG2_Ill_GATKHCSBGrefine_11249:HG2_Ill_GATKHC_27092:HG2_Ill_Krunchall_22912:HG2_Ill_SpiralSDKrefine_7088:HG2_Ill_manta_4589:HG2_Ill_svaba_21117:HG2_PB_assemblyticsPBcR_10841:HG2_PB_assemblyticsfalcon_11223:HG3_10X_allpass_3247:HG3_Ill_150bpfermikitraw_21330:HG3_Ill_250bpfermikitraw_21934:HG3_Ill_GATKHCSBGrefine_11171:HG3_Ill_GATKHC_26958:HG3_Ill_Krunchall_22500:HG3_Ill_svaba_21334;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0243902;ClusterMaxSizeDiff=0.0243902;ClusterMaxEditDist=0.109756;PBcalls=5;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-81;DistBack=39216;DistForward=18696;DistMin=18696;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=18:2997375-2997459;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1571.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:38:./.:4:28:11:5:1|0:0:21:30:0:0/1:42:25:./.:.:.:.:.:.
chr18	3833130	HG3_Ill_250bpfermikitraw_21945	ATTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_16849:HG2_PB_HySA_31212:HG4_PB_HySA_24921:HG4_PB_pbsv_17075:HG4_Ill_SVrefine2DISCOVARDovetail_11956:HG4_Ill_GATKHC_27037:HG4_Ill_GATKHCSBGrefine_11608:HG4_Ill_250bpfermikitraw_22216:HG4_Ill_150bpfermikitraw_21391:HG3_PB_SVrefine2PBcRDovetail_8316:HG3_PB_SVrefine2Falcon1Dovetail_10607:HG3_PB_HySA_25787:HG3_Ill_SVrefine2DISCOVARDovetail_12201:HG3_Ill_GATKHC_26970:HG3_Ill_GATKHCSBGrefine_11175:HG3_Ill_250bpfermikitraw_21945:HG3_Ill_150bpfermikitraw_21340:HG2_PB_pbsv_17173:HG2_PB_SVrefine2PBcRplusDovetail_4631:HG2_Ill_manta_4592:HG2_Ill_GATKHC_27106:HG2_Ill_GATKHCSBGrefine_11255:HG2_Ill_250bpfermikitraw_22598:HG2_Ill_150bpfermikitraw_21308:HG4_PB_assemblyticsfalcon_11033:HG4_PB_SVrefine2PBcRDovetail_8575:HG4_Ill_Krunchall_23232:HG2_PB_SVrefine2PB10Xhap12_12456:HG2_PB_SVrefine2Falcon2Bionano_8460:HG2_PB_SVrefine2Falcon1plusDovetail_5044:HG2_Ill_SVrefine2DISCOVARplusDovetail_5413:HG2_10X_SVrefine210Xhap12_11917;NumClusterSVs=32;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21308:HG2_Ill_250bpfermikitraw_22598:HG2_Ill_GATKHCSBGrefine_11255:HG2_Ill_GATKHC_27106:HG2_Ill_manta_4592:HG2_PB_SVrefine2PBcRplusDovetail_4631:HG2_PB_pbsv_17173:HG3_Ill_150bpfermikitraw_21340:HG3_Ill_250bpfermikitraw_21945:HG3_Ill_GATKHCSBGrefine_11175:HG3_Ill_GATKHC_26970:HG3_Ill_SVrefine2DISCOVARDovetail_12201:HG3_PB_HySA_25787:HG3_PB_SVrefine2Falcon1Dovetail_10607:HG3_PB_SVrefine2PBcRDovetail_8316;NumExactMatchSVs=15;ClusterMaxShiftDist=0.192308;ClusterMaxSizeDiff=0.192308;ClusterMaxEditDist=0.192308;PBcalls=14;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-52;DistBack=-37;DistForward=-5;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=61;REFWIDENED=18:3833131-3833243;PctSeqSimilarity=0.9608;PctSizeSimilarity=0.9231;PctRecOverlap=0.9245;SizeDiff=4;StartDistance=0;EndDistance=4;GTMatch=0;TruScore=93;MatchId=1572.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:54:1/1:0:13:2:26:./.:1:8:1:9:1/1:2:30:./.:.:.:.:.:.
chr18	4535388	HG2_PB_SVrefine2PB10Xhap12_12460	TTTTTGTGGGTTGTGTGTCCCCCAGTCTGCTGTCTCTGTGCCCAGTTCAGCACTAGGACTCATGTAAAAGTTGCAGTCCTTGTGGCCTAGACTGCCTTTCAAGTTTATTACAGCCCCAGGGCACAAAGATAAATATGATATAGTCTCTGTCTTCAAGTTTAGTAAATGGAAAATAAACATACCTAATATAGTGTGAAACGTACAAAAATTGAAGTTTAAAATTAATTATGTTAAGCAGCAAGATGAATGGTTATTTGTATTTTATAAAAGGGCAGAATTAGAAAAGAATTAACAGGCTTTGTAGAAATGATGAAATTGGTCATCAAGGACAAATAAGAGTTTGTTAGCTGAACAAAGGCTAGTAGGTGACAGTGTCAAGGTTAAGAGAAGAAGGTGAGAAACAGCATGATGTGAGTATTAGTTATCCATTGCTGTGTGGCGATATCATCATAAATGTGACAGCCTAAAGTATCACTCATTTATTAGCTCACTGTTTGGTGGGACAGGAGTCTAGGAGTGGTTTAGCTGAGTTCCCTGCTTCAGGGTCTCAATCTTGCAATCCAGATGTCAGCATGAACTGCTTTCTTATCAGAAGCTTGCATGAGAGAAAGATCCACTTCCAAGCTCACTCAGGTTGTTGGAAGAATTCACTCACTTGGTGCTATAGACTTGAAGACACTAGTTGTGTCTGGCTGTTGGTTGGAAGCTGCCTGCATTTCCTAGAGGTCTCAACAGTTTTTTGAGATATGGGCTCCCCAAACATGCCTGCTTACTTTATTGAGCCAGCAAAAAAGGTAGTCTTTTTGCAAGACATAATGTAACATAATTCCATAAACTTAATCACATGTATGTAATCACATGCACTTAAAGGATATCTGTATTATGGCTGCAATACCATAATATATACATAAGATGAAACATTTAGATATAGATAGATTGATAATATATGTATGAGTCAAATCATAAAAAGCCCAAGGAACTTGGACTTTATATTTAAGTGATAAGGAACTAGTGAAAGATTTGAAGAAGAATATTAATATATATTAATATAGTAATATATTAATATGTTCACATTTGTGTTTTAAATAGCTCAGTTGAGCAGGCACTGGAAAGATGAATTTGAAAACAGTGAGATTAGTTGGAAAATGATTTAAGTATCAACTGTAAAGAATGAGTCACCTCACTTAACAGTATTAAGTTCACTGAAAATAAATAGAAATTTCCTACATATGGAACAGCAGGTAGAAACTGGAGCTTTACCCTCTGTAACCTGATTGTTTCCTTGGAGATATTCTCCCAGTTCCCTTGCCAGCACTCTTGTCCTAGGTAGGGTATGGTGCTCTTGAA	AAGGT	20	PASS	ClusterIDs=HG2_PB_pbsv_17177:HG2_PB_SVrefine2PBcRplusDovetail_4634:HG2_Ill_tnscope_1819:HG2_Ill_SpiralSDKrefine_7096:HG4_PB_SVrefine2PBcRDovetail_8579:HG3_PB_SVrefine2Falcon1Dovetail_10611:HG2_PB_assemblyticsfalcon_11241:HG2_PB_SVrefine2PB10Xhap12_12460:HG2_PB_SVrefine2Falcon1plusDovetail_5047:HG2_10X_SVrefine210Xhap12_11921:HG2_PB_HySA_31217:HG3_PB_assemblyticsfalcon_11228:HG4_Ill_MetaSV_2128:HG4_10X_allpass_3091:HG4_PB_pbsv_17079:HG2_10X_allpass_2635:HG4_Ill_Krunchall_23237:HG2_PB_assemblyticsPBcR_10860:HG2_Ill_MetaSV_2067;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11921:HG2_PB_SVrefine2Falcon1plusDovetail_5047:HG2_PB_SVrefine2PB10Xhap12_12460:HG2_PB_assemblyticsfalcon_11241:HG3_PB_SVrefine2Falcon1Dovetail_10611:HG4_PB_SVrefine2PBcRDovetail_8579;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0602706;ClusterMaxSizeDiff=0.0541538;ClusterMaxEditDist=0.183887;PBcalls=11;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-1342;DistBack=-963;DistForward=-967;DistMin=-967;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:4535388-4536734;PctSeqSimilarity=0.973;PctSizeSimilarity=0.9978;PctRecOverlap=0.997;SizeDiff=-3;StartDistance=3;EndDistance=4;GTMatch=0;TruScore=98;MatchId=1573.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:51:47:0|1:44:0:0:37:0|1:54:0:0:19:./.:69:7:0/1:115:50:.:.:.
chr18	5324643	HG2_PB_SVrefine2Falcon2Bionano_8465	ACACATATATATGTTTGTAATGAAAATATTGAAAGAAAAAGAGCATATTGTGTGAGGGTCCAAGATGGCAGATTAGAAGAAGCTGCAGTCCATGGCTGTCATGGAGAAGAATGAAAACAGTGAGTGAATTCAGCACCTTCAACAGAAATACCCAGGTTCCTGCATTGGGACTGACTAGGTGGACAACTTGACCTTCAGAGAATGAAGAAAGGCGGGGTGGGGCAACAAGCCACCTGGGAGCAGCACAGAGCCAGAGGAACTCCTGCTCCCAACCAAGGGGAGTGGTGAGTGATTGTGCAACCCTGCCCAGGAAACCACACTTCTCCCATGGATCTTTGCAAACCATGGATCAAGAGATCCCCTCGTGAGCCCATACTACCAGGGCCTTGGCTCTGATCCACAGCGTTGCCCAGAATCTTGGCAGAGCAGCCGCTCAGGCACACACAGAGACCCAGGAGTTTTACATACTCCAGCCCCGGAAATCCCGGTGAGGTGGGAGATTCATCTGTACATTACCCTAGAAAGGGGGTGGAATCCAGGAAGCCAAGCAGCATCATTCTGCAGGCCCAACTTCCGCAACACCTCACAAGTTAAGATCCACTGGCTTGGAATTCCAGCCAGCCAGCTACACCAGGCTGGAGAGACTGCCTGAGATGGACCAACTTCTAGTGGGAAGGGGCGACCACTGTCACTATTGTTCAGTCGACTCAGCCATTCTAGCCTGCTGGCTCCAGAGAGTCCAGGCGGTCCAGAGAAGGAGGAGTCCCCCACAATGCAGCATAGCTGCTGTATTTTTGAAAAAAATTAATAAAATAGATAGACCACTATCTAGACTAACAAAGAAGAAAAGGGAGAATAATCAAATAGACACAATCAGAAATGTTAAGGGGATATCGCTACTGATCCCACAGAAATACAAACAACAATCAGAATATTATAAACACCTGTATGCACATAAACTAGAAAATCTAGAAGACTGGATATATTTCTGGACACATACACTTCCCAAGACTGTACGAGGAAGAAATTGAATCCCTGAACACACCAATAATGAGTTTTGAAATTGAGGCAGTAATAAATAGCCTACCAACCAAAAAAAGCCCAGGACCCAATGGATTTACCCCTGAATTCTAACACAGAAGATCTGGTACCATTCCTACTGGAACTATTCTGAAAAATTGAAAAGGAGGGACTCCTCCCTAACTCATTTTACGAGGCCAGCATTATCCTGATACCAAAACCTGGCAGAAATACAACAAAAAAGGAGAAAACTTTAGGCCAATATCCTTTATGAACATCAATGTAAAAATCCTCAATAAAATACTGGTAAACCGAATCCAGCGGCTCATCAAAATGCTTATCCACCATGACCAACTTGACAGCATCCCTGGGATGTAAGCTTGGTTTAACATATGCAAATCAATAAATGTGATTCATCACATAAACAGAACTAAAGACAAAAACTATATGATTACCTCATAGATGCAGAAAAGATCTCAGGTAAAATTTAACATTCCTTCATGTTAAAAACTCTCAATAAACCAGGTGTTGAAGGAATATACCTCAAAATGGTAAGAGCCATATATGACAAACCCAAAAC	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_22939:HG4_PB_pbsv_17087:HG2_PB_pbsv_17183:HG2_PB_HySA_31223:HG2_PB_SVrefine2PB10Xhap12_12464:HG2_Ill_tnscope_1822:HG4_PB_SVrefine2PBcRDovetail_8583:HG4_PB_SVrefine2Falcon1Dovetail_10627:HG4_10X_allpass_3094:HG3_PB_SVrefine2Falcon1Dovetail_10616:HG2_PB_SVrefine2PBcRplusDovetail_4637:HG2_PB_SVrefine2Falcon2Bionano_8465:HG2_PB_SVrefine2Falcon1plusDovetail_5051:HG2_Ill_SpiralSDKrefine_7101:HG2_Ill_SVrefine2DISCOVARplusDovetail_5421:HG2_10X_allpass_2637:HG2_10X_SVrefine210Xhap12_11925:HG4_PB_assemblyticsfalcon_11046:HG2_PB_assemblyticsfalcon_11248:HG2_PB_PB10Xdip_14174:HG4_Ill_MetaSV_2133:HG2_Ill_MetaSV_2071:HG4_Ill_Krunchall_23247;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11925:HG2_10X_allpass_2637:HG2_Ill_SVrefine2DISCOVARplusDovetail_5421:HG2_Ill_SpiralSDKrefine_7101:HG2_PB_SVrefine2Falcon1plusDovetail_5051:HG2_PB_SVrefine2Falcon2Bionano_8465:HG2_PB_SVrefine2PBcRplusDovetail_4637:HG3_PB_SVrefine2Falcon1Dovetail_10616:HG4_10X_allpass_3094:HG4_PB_SVrefine2Falcon1Dovetail_10627:HG4_PB_SVrefine2PBcRDovetail_8583;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0240222;ClusterMaxSizeDiff=0.0240222;ClusterMaxEditDist=0.0240222;PBcalls=13;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=1;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1599;DistBack=-1598;DistForward=2142;DistMin=-1598;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=18:5324644-5326244;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1574.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:54:33:1|0:4:23:47:0:0|1:64:0:0:39:0/1:57:23:0/1:144:53:1772:.:.
chr18	5457105	HG2_10X_SVrefine210Xhap12_11926	AAAAACTGAAACCATAAGGCAAACCGCACTCTCAACATGGCTTCAAGATAGGTACAGCCTTTTCCTGTAAGCAACAACTCTACCGTTCTTTTATCTGTAGG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_17184:HG2_PB_HySA_31224:HG4_PB_assemblyticsfalcon_11047:HG4_PB_pbsv_17089:HG4_PB_HySA_24933:HG4_PB_SVrefine2Falcon1Dovetail_10628:HG4_Ill_svaba_21080:HG4_Ill_manta_3897:HG4_Ill_MetaSV_2134:HG4_Ill_Krunchall_23248:HG4_Ill_GATKHC_27050:HG4_Ill_GATKHCSBGrefine_11619:HG4_Ill_250bpfermikitraw_22227:HG4_Ill_150bpfermikitraw_21401:HG4_CG_vcfBeta_10715:HG4_10X_allpass_3095:HG3_PB_pbsv_16857:HG3_PB_assemblyticsfalcon_11236:HG3_PB_SVrefine2Falcon1Dovetail_10617:HG3_Ill_svaba_21355:HG3_Ill_manta_3754:HG3_Ill_SVrefine2DISCOVARDovetail_12212:HG3_Ill_MetaSV_2216:HG3_Ill_Krunchall_22524:HG3_Ill_GATKHC_26980:HG3_Ill_GATKHCSBGrefine_11183:HG3_Ill_250bpfermikitraw_21954:HG3_Ill_150bpfermikitraw_21350:HG3_CG_vcfBeta_9192:HG3_10X_allpass_3251:HG2_PB_SVrefine2PB10Xhap12_12465:HG2_Ill_svaba_21141:HG2_Ill_scalpel_15970:HG2_Ill_manta_4596:HG2_Ill_breakscan11_2453:HG2_Ill_SpiralSDKrefine_7102:HG2_Ill_SVrefine2DISCOVARplusDovetail_5423:HG2_Ill_MetaSV_2072:HG2_Ill_Krunchall_22940:HG2_Ill_GATKHC_27124:HG2_Ill_GATKHCSBGrefine_11265:HG2_Ill_250bpfermikitraw_22610:HG2_Ill_150bpfermikitraw_21322:HG2_CG_vcfBeta_9695:HG2_10X_allpass_2638:HG2_10X_SVrefine210Xhap12_11926:HG4_Ill_Spiral_1330:HG2_Ill_Spiral_1123;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11926:HG2_10X_allpass_2638:HG2_CG_vcfBeta_9695:HG2_Ill_150bpfermikitraw_21322:HG2_Ill_250bpfermikitraw_22610:HG2_Ill_GATKHCSBGrefine_11265:HG2_Ill_GATKHC_27124:HG2_Ill_Krunchall_22940:HG2_Ill_MetaSV_2072:HG2_Ill_SVrefine2DISCOVARplusDovetail_5423:HG2_Ill_SpiralSDKrefine_7102:HG2_Ill_breakscan11_2453:HG2_Ill_manta_4596:HG2_Ill_scalpel_15970:HG2_Ill_svaba_21141:HG2_PB_SVrefine2PB10Xhap12_12465:HG3_10X_allpass_3251:HG3_CG_vcfBeta_9192:HG3_Ill_150bpfermikitraw_21350:HG3_Ill_250bpfermikitraw_21954:HG3_Ill_GATKHCSBGrefine_11183:HG3_Ill_GATKHC_26980:HG3_Ill_Krunchall_22524:HG3_Ill_MetaSV_2216:HG3_Ill_SVrefine2DISCOVARDovetail_12212:HG3_Ill_manta_3754:HG3_Ill_svaba_21355:HG3_PB_SVrefine2Falcon1Dovetail_10617:HG3_PB_assemblyticsfalcon_11236:HG3_PB_pbsv_16857:HG4_10X_allpass_3095:HG4_CG_vcfBeta_10715:HG4_Ill_150bpfermikitraw_21401:HG4_Ill_250bpfermikitraw_22227:HG4_Ill_GATKHCSBGrefine_11619:HG4_Ill_GATKHC_27050:HG4_Ill_Krunchall_23248:HG4_Ill_MetaSV_2134:HG4_Ill_manta_3897:HG4_Ill_svaba_21080:HG4_PB_SVrefine2Falcon1Dovetail_10628:HG4_PB_pbsv_17089;NumExactMatchSVs=42;ClusterMaxShiftDist=0.231481;ClusterMaxSizeDiff=0.231481;ClusterMaxEditDist=0.231481;PBcalls=10;Illcalls=31;TenXcalls=4;CGcalls=3;PBexactcalls=6;Illexactcalls=29;TenXexactcalls=4;CGexactcalls=3;HG2count=19;HG3count=14;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-100;DistBack=45453;DistForward=-96;DistMin=-96;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=18:5457106-5457209;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1575.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:37:0|1:19:1:2:30:0|1:39:0:0:15:0/1:28:20:./.:.:.:.:.:.
chr18	7098727	HG2_PB_SVrefine2Falcon1plusDovetail_5053	GCCCCCCGCCCGGCCAGCCACCCCGTCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11932:HG3_Ill_GATKHCSBGrefine_11187:HG2_PB_assemblyticsfalcon_11261:HG2_PB_SVrefine2Falcon1plusDovetail_5053:HG3_PB_pbsv_16863:HG2_PB_pbsv_17188:HG3_Ill_GATKHCSBGrefine_11186;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5053:HG2_PB_assemblyticsfalcon_11261;NumExactMatchSVs=2;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.103586;PBcalls=4;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-127;DistBack=-116;DistForward=45408;DistMin=-116;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=183;REFWIDENED=18:7098654-7098963;PctSeqSimilarity=0.9935;PctSizeSimilarity=0.9921;PctRecOverlap=0.7969;SizeDiff=1;StartDistance=25;EndDistance=26;GTMatch=0;TruScore=92;MatchId=1576.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:./.:23:9:6:12:./.:3:3:25:1:0/1:27:6:./.:.:.:.:.:.
chr18	8634164	HG2_Ill_GATKHC_27152	ATGGTGACTCACACCTGTAATCCCAGCACTTTGGAAGGCCAAAGCAAGAGGATCACTTGAACCCAGGAGGTCGAGACCAGCCTGGGCAACATAGTGGGACTCCATCTCTCTCTCTC	A	20	PASS	ClusterIDs=HG4_PB_pbsv_17097:HG2_10X_SVrefine210Xhap12_11935:HG2_PB_SVrefine2Falcon2Bionano_8469:HG2_PB_pbsv_17194:HG4_PB_HySA_24950:HG4_Ill_scalpel_15584:HG4_Ill_MetaSV_2136:HG4_Ill_GATKHC_27074:HG4_Ill_GATKHCSBGrefine_11624:HG4_Ill_150bpfermikitraw_21426:HG4_10X_allpass_3096:HG2_Ill_manta_4598:HG2_Ill_SpiralSDKrefine_7119:HG2_Ill_SVrefine2DISCOVARplusDovetail_5433:HG2_Ill_GATKHC_27152:HG2_Ill_GATKHCSBGrefine_11269:HG2_10X_allpass_2639:HG4_PB_SVrefine2PBcRDovetail_8588;NumClusterSVs=18;ExactMatchIDs=HG2_10X_allpass_2639:HG2_Ill_GATKHCSBGrefine_11269:HG2_Ill_GATKHC_27152:HG2_Ill_SVrefine2DISCOVARplusDovetail_5433:HG2_Ill_SpiralSDKrefine_7119:HG2_Ill_manta_4598:HG4_10X_allpass_3096:HG4_Ill_150bpfermikitraw_21426:HG4_Ill_GATKHCSBGrefine_11624:HG4_Ill_GATKHC_27074:HG4_Ill_MetaSV_2136:HG4_Ill_scalpel_15584;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0347826;ClusterMaxSizeDiff=0.0347826;ClusterMaxEditDist=0.0347826;PBcalls=5;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-115;DistBack=79763;DistForward=4865;DistMin=4865;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=18:8634165-8634280;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1577.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:29:./.:10:20:29:4:0|1:24:1:0:22:0/1:17:11:./.:.:.:.:.:.
chr18	8659389	HG3_Ill_250bpfermikitraw_21984	AATGCGCAGACTTCCATGTTCGTTGGAAGCCTCCCTTCCTGACTGTGAATTGGGACG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11936:HG3_PB_pbsv_16867:HG3_Ill_svaba_21377:HG3_Ill_scalpel_16332:HG3_Ill_manta_3755:HG3_Ill_Krunchall_22555:HG3_Ill_GATKHC_27014:HG3_Ill_GATKHCSBGrefine_11188:HG3_Ill_250bpfermikitraw_21984:HG3_Ill_150bpfermikitraw_21379:HG2_Ill_svaba_21163:HG2_Ill_scalpel_15992:HG2_Ill_breakscan11_2455:HG2_Ill_SpiralSDKrefine_7120:HG2_Ill_Krunchall_22965:HG2_Ill_GATKHC_27153:HG2_Ill_GATKHCSBGrefine_11270:HG2_Ill_250bpfermikitraw_22637:HG2_Ill_150bpfermikitraw_21347:HG2_PB_pbsv_17195:HG3_Ill_SVrefine2DISCOVARDovetail_12224;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21347:HG2_Ill_250bpfermikitraw_22637:HG2_Ill_GATKHCSBGrefine_11270:HG2_Ill_GATKHC_27153:HG2_Ill_Krunchall_22965:HG2_Ill_SpiralSDKrefine_7120:HG2_Ill_breakscan11_2455:HG2_Ill_scalpel_15992:HG2_Ill_svaba_21163:HG3_Ill_150bpfermikitraw_21379:HG3_Ill_250bpfermikitraw_21984:HG3_Ill_GATKHCSBGrefine_11188:HG3_Ill_GATKHC_27014:HG3_Ill_Krunchall_22555:HG3_Ill_manta_3755:HG3_Ill_scalpel_16332:HG3_Ill_svaba_21377:HG3_PB_pbsv_16867;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0176991;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.0353982;PBcalls=2;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-56;DistBack=-4;DistForward=11291;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=58;REFWIDENED=18:8659338-8659451;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1578.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:18:./.:14:6:12:10:1|0:0:9:13:0:0/1:30:30:./.:.:.:.:.:.
chr18	8934742	HG3_Ill_scalpel_16335	GAGTGAAGCTGCAGACCTTCGCGGTGAGTGTTACAGCTCTTAAGGCAGCACGTCTGGAGTTGTTCGTTCCTCCTGGTGGGCTCGTGGTCTCGCTGGGCTCAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11938:HG2_PB_HySA_31248:HG2_PB_pbsv_17196:HG3_PB_HySA_25822:HG3_PB_pbsv_16868:HG3_Ill_svaba_21380:HG3_Ill_scalpel_16335:HG3_Ill_MetaSV_2217:HG3_Ill_GATKHC_27018:HG3_Ill_GATKHCSBGrefine_11189:HG2_Ill_svaba_21165:HG2_Ill_scalpel_15995:HG2_Ill_MetaSV_2073:HG2_Ill_GATKHC_27156:HG2_Ill_GATKHCSBGrefine_11271:HG2_10X_allpass_2640:HG2_Ill_breakscan11_2456:HG3_PB_SVrefine2PBcRDovetail_8327:HG3_Ill_SVrefine2DISCOVARDovetail_12226:HG2_PB_SVrefine2PB10Xhap12_12471:HG2_Ill_SVrefine2DISCOVARplusDovetail_5435;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_2640:HG2_Ill_GATKHCSBGrefine_11271:HG2_Ill_GATKHC_27156:HG2_Ill_MetaSV_2073:HG2_Ill_scalpel_15995:HG2_Ill_svaba_21165:HG3_Ill_GATKHCSBGrefine_11189:HG3_Ill_GATKHC_27018:HG3_Ill_MetaSV_2217:HG3_Ill_scalpel_16335:HG3_Ill_svaba_21380:HG3_PB_pbsv_16868;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0588235;PBcalls=6;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-102;DistBack=52238;DistForward=262;DistMin=262;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=78;REFWIDENED=18:8934707-8934886;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1579.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:45:./.:32:18:8:26:1|0:0:14:33:0:0/1:43:30:./.:.:.:.:.:.
chr18	9225118	HG2_Ill_MetaSV_2076	AAGGCTTGTGAACTATTTGAATAAATAAACAATATAGGGATAGAATAGTCATCTATTTAAAGTATTAATTTGGCCAGGCACAGTGACTTATGCCTGTAATCCCAGCACTTTTGGGAAGTCGAGGCGGACAGATCACTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACATGGTGAAACCCCATCTCTACAAAAAATACAAAAATTAGCCAGGCATGGTGGCGTGCGTCTGTAGTACCAGCTACTTGGGAGGCTGAGGTGGGAGAATGTCTTGAGCCCAGGAGGCGGAGGTTGCAAGGAGCTGAGGTCGTGCCACTGCATTCCAGCCTGGCTGAC	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1823:HG2_PB_assemblyticsPBcR_10888:HG2_PB_SVrefine2PBcRplusDovetail_4644:HG3_10X_allpass_3254:HG3_Ill_MetaSV_2221:HG3_PB_assemblyticsfalcon_11259:HG3_PB_pbsv_16873:HG3_PB_SVrefine2PBcRDovetail_8331:HG3_PB_SVrefine2Falcon1Dovetail_10626:HG3_Ill_scalpel_16338:HG3_Ill_SVrefine2DISCOVARDovetail_12231:HG3_Ill_GATKHCSBGrefine_11192:HG2_PB_pbsv_17203:HG2_PB_assemblyticsfalcon_11272:HG2_PB_SVrefine2PB10Xhap12_12477:HG2_PB_SVrefine2Falcon1plusDovetail_5059:HG2_Ill_SVrefine2DISCOVARplusDovetail_5437:HG2_Ill_MetaSV_2076:HG2_Ill_GATKHCSBGrefine_11274:HG3_Ill_Krunchall_22560:HG3_Ill_MetaSV_2220;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11274:HG2_Ill_MetaSV_2076:HG2_Ill_SVrefine2DISCOVARplusDovetail_5437:HG2_PB_SVrefine2Falcon1plusDovetail_5059:HG2_PB_SVrefine2PB10Xhap12_12477:HG2_PB_assemblyticsfalcon_11272:HG2_PB_pbsv_17203:HG3_Ill_GATKHCSBGrefine_11192:HG3_Ill_SVrefine2DISCOVARDovetail_12231:HG3_Ill_scalpel_16338:HG3_PB_SVrefine2Falcon1Dovetail_10626:HG3_PB_SVrefine2PBcRDovetail_8331:HG3_PB_pbsv_16873;NumExactMatchSVs=13;ClusterMaxShiftDist=0.132184;ClusterMaxSizeDiff=0.132184;ClusterMaxEditDist=0.132184;PBcalls=10;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-335;DistBack=28904;DistForward=-335;DistMin=-335;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=18:9225119-9225455;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1580.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:55:./.:15:26:7:13:1|0:0:14:54:0:0/1:38:16:0/1:24:10:.:.:.
chr18	9385391	HG2_PB_SVrefine2PBcRplusDovetail_4645	TAAAAGAAAGAACGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1125:HG2_Ill_Krunchall_22971:HG2_PB_assemblyticsPBcR_10890:HG4_PB_assemblyticsfalcon_11073:HG2_PB_assemblyticsfalcon_11274:HG2_PB_pbsv_17205:HG2_PB_PB10Xdip_14573:HG2_PB_PB10Xdip_14574:HG4_PB_pbsv_17104:HG4_PB_HySA_24963:HG4_Ill_MetaSV_2139:HG2_Ill_tnscope_1824:HG4_PB_SVrefine2PBcRDovetail_8594:HG4_PB_SVrefine2Falcon1Dovetail_10638:HG4_Ill_manta_3901:HG4_Ill_SVrefine2DISCOVARDovetail_11983:HG4_Ill_GATKHCSBGrefine_11628:HG4_10X_allpass_3099:HG2_PB_SVrefine2PBcRplusDovetail_4645:HG2_PB_SVrefine2PB10Xhap12_12479:HG2_PB_SVrefine2Falcon1plusDovetail_5060:HG2_PB_HySA_31257:HG2_Ill_manta_4601:HG2_Ill_MetaSV_2078:HG2_Ill_GATKHCSBGrefine_11276:HG2_10X_allpass_2642:HG2_10X_SVrefine210Xhap12_11941:HG2_Ill_breakscan11_2458;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11941:HG2_10X_allpass_2642:HG2_Ill_GATKHCSBGrefine_11276:HG2_Ill_MetaSV_2078:HG2_Ill_manta_4601:HG2_PB_HySA_31257:HG2_PB_PB10Xdip_14574:HG4_PB_SVrefine2PBcRDovetail_8594:HG4_PB_SVrefine2Falcon1Dovetail_10638:HG4_Ill_manta_3901:HG4_Ill_SVrefine2DISCOVARDovetail_11983:HG4_Ill_GATKHCSBGrefine_11628:HG4_10X_allpass_3099:HG2_PB_SVrefine2PBcRplusDovetail_4645:HG2_PB_SVrefine2PB10Xhap12_12479:HG2_PB_SVrefine2Falcon1plusDovetail_5060;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0782473;ClusterMaxSizeDiff=0.0782473;ClusterMaxEditDist=0.0782473;PBcalls=14;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=40861;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=18:9385392-9385728;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1581.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:39:0|1:26:3:3:29:0|1:31:0:0:11:0/1:26:23:0/1:32:7:.:.:.
chr18	9621929	HG3_Ill_MetaSV_2222	CGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATTGAAACCACCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATTAATCTGGGAGGCGAAGCTTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGTGGGAGACTCCGTCTTGGGGGGAAAAAAGAAAAAAAAGTTTAGCCGGGCGTGGTGGCTCAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11942:HG2_PB_assemblyticsfalcon_11278:HG2_Ill_Krunchall_22974:HG2_PB_HySA_31263:HG4_PB_pbsv_17109:HG3_PB_pbsv_16876:HG2_PB_pbsv_17209:HG4_Ill_MetaSV_2142:HG4_Ill_GATKHCSBGrefine_11631:HG4_10X_allpass_3100:HG3_Ill_scalpel_16341:HG3_Ill_manta_3758:HG3_Ill_MetaSV_2222:HG3_Ill_GATKHCSBGrefine_11195:HG3_10X_allpass_3255:HG2_PB_SVrefine2Falcon1plusDovetail_5063:HG2_Ill_manta_4602:HG2_Ill_SpiralSDKrefine_7125:HG2_Ill_GATKHCSBGrefine_11279:HG2_10X_allpass_2643:HG4_PB_SVrefine2PBcRDovetail_8597:HG2_PB_assemblyticsPBcR_10894:HG2_PB_SVrefine2PBcRplusDovetail_4648:HG3_PB_HySA_25830:HG4_PB_SVrefine2Falcon1Dovetail_10641:HG3_PB_SVrefine2PBcRDovetail_8333:HG3_PB_SVrefine2Falcon1Dovetail_10628:HG3_Ill_SVrefine2DISCOVARDovetail_12234:HG2_PB_SVrefine2PB10Xhap12_12483;NumClusterSVs=29;ExactMatchIDs=HG2_10X_allpass_2643:HG2_Ill_GATKHCSBGrefine_11279:HG2_Ill_SpiralSDKrefine_7125:HG2_Ill_manta_4602:HG2_PB_SVrefine2Falcon1plusDovetail_5063:HG3_10X_allpass_3255:HG3_Ill_GATKHCSBGrefine_11195:HG3_Ill_MetaSV_2222:HG3_Ill_manta_3758:HG3_Ill_scalpel_16341:HG4_10X_allpass_3100:HG4_Ill_GATKHCSBGrefine_11631:HG4_Ill_MetaSV_2142;NumExactMatchSVs=13;ClusterMaxShiftDist=0.293194;ClusterMaxSizeDiff=0.289703;ClusterMaxEditDist=0.390925;PBcalls=14;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=1;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=-166;DistForward=-307;DistMin=-307;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=263;REFWIDENED=18:9621911-9622479;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1582.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:45:0|1:39:1:1:34:1|0:0:25:42:0:0/1:39:32:0/1:16:5:.:.:.
chr18	9923250	HG4_Ill_GATKHCSBGrefine_11633	TTTTTAAGGAAATGATTAGATTGAATTACCGTTAAAAAGTAGGGATGTTAATTAAAAAAGAATTGTTGCTATGAGAGGACTTTTAAACTTTTAGCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11944:HG3_PB_pbsv_16878:HG2_PB_pbsv_17211:HG4_Ill_svaba_21108:HG4_Ill_GATKHCSBGrefine_11633:HG4_Ill_250bpfermikitraw_22263:HG4_Ill_150bpfermikitraw_21439:HG3_Ill_svaba_21387:HG3_Ill_manta_3759:HG3_Ill_GATKHCSBGrefine_11197:HG3_Ill_250bpfermikitraw_21994:HG3_Ill_150bpfermikitraw_21388:HG2_Ill_svaba_21177:HG2_Ill_manta_4604:HG2_Ill_SpiralSDKrefine_7128:HG2_Ill_GATKHCSBGrefine_11281:HG2_Ill_250bpfermikitraw_22649:HG2_Ill_150bpfermikitraw_21360:HG4_PB_HySA_24977:HG3_PB_HySA_25836:HG2_PB_HySA_31269:HG4_PB_pbsv_17113:HG4_PB_SVrefine2PBcRDovetail_8598:HG4_PB_SVrefine2Falcon1Dovetail_10642:HG4_Ill_SVrefine2DISCOVARDovetail_11988:HG3_PB_SVrefine2PBcRDovetail_8335:HG3_PB_SVrefine2Falcon1Dovetail_10629:HG3_Ill_SVrefine2DISCOVARDovetail_12237:HG2_PB_SVrefine2PBcRplusDovetail_4649:HG2_PB_SVrefine2PB10Xhap12_12485:HG2_PB_SVrefine2Falcon2Bionano_8476:HG2_PB_SVrefine2Falcon1plusDovetail_5064:HG2_Ill_SVrefine2DISCOVARplusDovetail_5440;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21360:HG2_Ill_250bpfermikitraw_22649:HG2_Ill_GATKHCSBGrefine_11281:HG2_Ill_SpiralSDKrefine_7128:HG2_Ill_manta_4604:HG2_Ill_svaba_21177:HG3_Ill_150bpfermikitraw_21388:HG3_Ill_250bpfermikitraw_21994:HG3_Ill_GATKHCSBGrefine_11197:HG3_Ill_manta_3759:HG3_Ill_svaba_21387:HG4_Ill_150bpfermikitraw_21439:HG4_Ill_250bpfermikitraw_22263:HG4_Ill_GATKHCSBGrefine_11633:HG4_Ill_svaba_21108;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0208333;ClusterMaxSizeDiff=0.0208333;ClusterMaxEditDist=0.0315789;PBcalls=14;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=1;SVLEN=-95;DistBack=35642;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=96;REFWIDENED=18:9923242-9923432;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1583.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:2:21:0:25:./.:0:3:0:6:1/1:0:40:./.:.:.:.:.:.
chr18	10222278	HG2_PB_SVrefine2PBcRplusDovetail_4651	TAATGCTGTATCTGTGTTTGAGACCAGAGACACTAACATGGGTTAAATTGTGAAAGTGTCTAGCATTAGATATTGCAGTAGCAACTAGGCAATCAGCCATTTGATTCCCTGCAGTCAAAGGTCCTGGAAGAGGTGTATGAGCCCTAATGTGAGTGATGTAAAAAGGTTGCATTCTACTCCTGACTGCTGTTCGCAATTGGGTAAATAAAGTCATCTGTTGTTCATCTGTGTGAAATCATAACTGAGCATTTTCAATTAATTGTTTGGAATGAACCATGTAAGAAAAATCAGAAATCACATTAATAGGCATTTTAAAAGCAGTCAGTACCTCAGTTACAGCTACAAGCTCCACTTTTTGAGCTGAAGTATAGCGTGTCTGAAAAACTTTACATTTCGACACAGAATAAGAAGCTTTACCATTACTAGACCCATCTGTGAAGACATTTTCGGCACCTTCAGTTGGTTTAAATTTAGTTATTTTAGGGAGAATCCAATTAGTTAATTTCAAAAATTGAAACAGTTTCGTTTTAGGAAAATGATTATCGAGAATATCCACAAAGTCAGCTAAATGGGTTTGCCAAGTAAGACTATTTATAAAAGCTTCCTGTATTTGTGCCTTCGTGAGAAGGACAATAATTTTTCCAGGATCATATCCATGTAATTCAACAATCTGAGTTCTCCCATTTCCTATCATAGTAGCGATTTGATCCAAATAAGGAGTTAGAGTCCATGAATTAGTATGTGGAAGAACAAGCCACTCTACAAGATCTTGATCTTGAACAATAACAGCAGTAGATGAATGCTAAGTTGGAAAAGTTGGCAAATCTAGAATCTTCTCTGGATCTATTCTATTTATTTGAGCTTTATGGACTTGCTTTTCGATTAGCTGCAGCTCTGCCTCAGCTTCTTTTGTTAATTGCCGAGGGCTAGTGAAACTAGGATCTCCTCTGAGGATGGAAAATAGATTACTCATGGCATAGGTAGGAATGCCTAGGGCAGGTCATATCCAATTAATGTCCCCTAGTAATTTTTGAAAGTCATTTAATGTTTTCAGTTGATCCCTACATATGGTTACTTTCTGTGGCACAATGGTAGTGTCATTTACTAAGGTCCCCAAATAGGAGTAAGGAGTAGTAGTCTGAATTTTTTCAGGAGCTGTAATTAAACCAGCACGAGAAATCGAGTTTTGCAAGTGATCATAACACTGGAGTAATATTTCTTGAGTGGGGGCAGCACAAAGTATATCATCCATATAATGAATAATGTAACACTGTGAAAATTTTTTACAAGTAGGTTCAATTGTTTGTCCTACCTACATAAGTCTGGC	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2224:HG3_PB_pbsv_16883:HG2_10X_allpass_2645:HG3_PB_assemblyticsfalcon_11275:HG2_PB_assemblyticsfalcon_11290:HG2_PB_assemblyticsPBcR_10906:HG3_Ill_Krunchall_22568:HG2_Ill_Krunchall_22984:HG2_PB_HySA_31275:HG2_Ill_tnscope_1825:HG3_PB_SVrefine2PBcRDovetail_8338:HG3_PB_SVrefine2Falcon1Dovetail_10633:HG3_10X_allpass_3257:HG2_PB_pbsv_17214:HG2_PB_SVrefine2PBcRplusDovetail_4651:HG2_PB_SVrefine2PB10Xhap12_12488:HG2_PB_SVrefine2Falcon1plusDovetail_5066:HG2_Ill_SpiralSDKrefine_7132:HG2_Ill_MetaSV_2081:HG2_10X_SVrefine210Xhap12_11946;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11946:HG2_Ill_MetaSV_2081:HG2_Ill_SpiralSDKrefine_7132:HG2_PB_SVrefine2Falcon1plusDovetail_5066:HG2_PB_SVrefine2PB10Xhap12_12488:HG2_PB_SVrefine2PBcRplusDovetail_4651:HG2_PB_pbsv_17214:HG3_10X_allpass_3257:HG3_PB_SVrefine2Falcon1Dovetail_10633:HG3_PB_SVrefine2PBcRDovetail_8338;NumExactMatchSVs=10;ClusterMaxShiftDist=0.132862;ClusterMaxSizeDiff=0.132862;ClusterMaxEditDist=0.132862;PBcalls=11;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-1326;DistBack=-446;DistForward=-1165;DistMin=-1165;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=18:10222279-10223606;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1584.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:39:./.:1:15:10:9:1|0:0:29:72:0:0/1:35:19:0/1:118:61:1458:.:.
chr18	10462404	HG2_Ill_manta_4606	TTTCCTTCCTTCCTTCCTTTCCCCCTTGCTCCCTCTCTCCTTTCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCTGTGACCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTGTGACCCTCCCTTCCTCCCTTCCTTCCTTCCTGTGACCCTCCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCCTCCCTCCTTCCTTCC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_17216:HG2_Ill_Krunchall_22987:HG4_PB_pbsv_17116:HG4_Ill_Krunchall_23291:HG4_PB_HySA_24984:HG4_Ill_scalpel_15599:HG4_Ill_manta_3903:HG4_Ill_GATKHCSBGrefine_11637:HG2_Ill_GATKHCSBGrefine_11287:HG3_PB_HySA_25850:HG2_PB_HySA_31278:HG4_Ill_MetaSV_2144:HG3_Ill_scalpel_16348:HG3_Ill_GATKHCSBGrefine_11200:HG3_10X_allpass_3259:HG2_Ill_scalpel_16009:HG2_Ill_manta_4606:HG2_Ill_SpiralSDKrefine_7135:HG2_Ill_GATKHCSBGrefine_11286:HG3_PB_pbsv_16886:HG2_Ill_MetaSV_2082:HG2_PB_SVrefine2PB10Xhap12_12490:HG3_PB_SVrefine2PBcRDovetail_8340:HG3_Ill_SVrefine2DISCOVARDovetail_12239:HG2_PB_SVrefine2PBcRplusDovetail_4652:HG2_PB_SVrefine2Falcon2Bionano_8478:HG2_PB_SVrefine2Falcon1plusDovetail_5067:HG2_Ill_SVrefine2DISCOVARplusDovetail_5441:HG2_10X_SVrefine210Xhap12_11948:HG3_PB_SVrefine2Falcon1Dovetail_10634:HG4_PB_SVrefine2PBcRDovetail_8600:HG4_PB_SVrefine2Falcon1Dovetail_10645:HG4_Ill_SVrefine2DISCOVARDovetail_11989:HG2_10X_SVrefine210Xhap12_11947;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11286:HG2_Ill_SpiralSDKrefine_7135:HG2_Ill_manta_4606:HG2_Ill_scalpel_16009:HG3_10X_allpass_3259:HG3_Ill_GATKHCSBGrefine_11200:HG3_Ill_scalpel_16348;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0956341;ClusterMaxSizeDiff=0.0956341;ClusterMaxEditDist=0.0956341;PBcalls=14;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-247;DistBack=35480;DistForward=-231;DistMin=-231;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=43;REFWIDENED=18:10462380-10462669;PctSeqSimilarity=0.8621;PctSizeSimilarity=0.9352;PctRecOverlap=0.9355;SizeDiff=16;StartDistance=-5;EndDistance=11;GTMatch=0;TruScore=91;MatchId=1585.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:61:1/1:1:27:1:27:./.:0:23:4:11:1/1:2:40:./.:.:.:.:.:.
chr18	11959510	HG2_PB_pbsv_17230	CCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCG	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_22674:HG2_PB_pbsv_17230:HG4_PB_pbsv_17130;NumClusterSVs=3;ExactMatchIDs=HG2_PB_pbsv_17230;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0266667;ClusterMaxSizeDiff=0.0263158;ClusterMaxEditDist=0.0533333;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-74;DistBack=13472;DistForward=70;DistMin=70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=18:11959509-11959586;PctSeqSimilarity=0.9882;PctSizeSimilarity=0.9737;PctRecOverlap=0.5455;SizeDiff=-2;StartDistance=35;EndDistance=33;GTMatch=0;TruScore=83;MatchId=1586.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:17:0|1:21:0:1:15:./.:14:2:20:1:0/1:22:5:./.:.:.:.:.:.
chr18	12851182	HG2_Ill_GATKHCSBGrefine_11298	TAATAATATTATATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAAAAAAG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1127:HG3_PB_assemblyticsfalcon_11304:HG2_10X_allpass_2647:HG2_PB_SVrefine2PB10Xhap12_12505:HG4_PB_assemblyticsfalcon_11124:HG2_PB_HySA_31323:HG3_Ill_Krunchall_22606:HG2_PB_pbsv_17236:HG2_Ill_Krunchall_23018:HG4_PB_pbsv_17136:HG2_PB_SVrefine2PBcRplusDovetail_4662:HG2_PB_assemblyticsPBcR_10946:HG4_Ill_MetaSV_2150:HG3_PB_HySA_25882:HG2_Ill_tnscope_1829:HG2_Ill_MetaSV_2085:HG4_PB_SVrefine2Falcon1Dovetail_10650:HG4_Ill_manta_3908:HG4_Ill_GATKHCSBGrefine_11648:HG4_10X_allpass_3107:HG3_PB_pbsv_16907:HG3_PB_SVrefine2PBcRDovetail_8349:HG3_PB_SVrefine2Falcon1Dovetail_10643:HG3_Ill_scalpel_16371:HG3_Ill_manta_3762:HG3_Ill_SVrefine2DISCOVARDovetail_12247:HG3_Ill_MetaSV_2229:HG3_Ill_GATKHCSBGrefine_11207:HG3_10X_allpass_3262:HG2_PB_SVrefine2Falcon1plusDovetail_5078:HG2_Ill_manta_4611:HG2_Ill_GATKHCSBGrefine_11298:HG2_10X_SVrefine210Xhap12_11960:HG4_Ill_Spiral_1333;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11960:HG2_Ill_GATKHCSBGrefine_11298:HG2_Ill_manta_4611:HG2_PB_SVrefine2Falcon1plusDovetail_5078:HG3_10X_allpass_3262:HG3_Ill_GATKHCSBGrefine_11207:HG3_Ill_MetaSV_2229:HG3_Ill_SVrefine2DISCOVARDovetail_12247:HG3_Ill_manta_3762:HG3_Ill_scalpel_16371:HG3_PB_SVrefine2Falcon1Dovetail_10643:HG3_PB_SVrefine2PBcRDovetail_8349:HG3_PB_pbsv_16907:HG4_10X_allpass_3107:HG4_Ill_GATKHCSBGrefine_11648:HG4_Ill_manta_3908:HG4_PB_SVrefine2Falcon1Dovetail_10650;NumExactMatchSVs=17;ClusterMaxShiftDist=0.197092;ClusterMaxSizeDiff=0.197092;ClusterMaxEditDist=0.197092;PBcalls=14;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-301;DistForward=-321;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=18:12851183-12851525;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:35:0|1:26:3:1:28:0|1:38:0:0:16:0/1:28:22:0/1:34:6:.:.:.
chr18	13106402	HG3_Ill_GATKHC_27072	CACTCACCACTGCCATCACCATTTCCCACACAACCCTCAATTACAACCACACCCCACAGAACTACCACCACCACTACCACT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11961:HG2_PB_pbsv_17240:HG3_PB_pbsv_16910:HG2_PB_assemblyticsPBcR_10948:HG3_Ill_svaba_21422:HG3_Ill_manta_3763:HG3_Ill_Krunchall_22609:HG3_Ill_GATKHC_27072:HG3_Ill_GATKHCSBGrefine_11210:HG3_Ill_250bpfermikitraw_22033:HG3_Ill_150bpfermikitraw_21424:HG2_Ill_svaba_21217:HG2_Ill_GATKHC_27216:HG2_Ill_GATKHCSBGrefine_11301:HG2_Ill_150bpfermikitraw_21400;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21400:HG2_Ill_GATKHCSBGrefine_11301:HG2_Ill_GATKHC_27216:HG2_Ill_svaba_21217:HG3_Ill_150bpfermikitraw_21424:HG3_Ill_250bpfermikitraw_22033:HG3_Ill_GATKHCSBGrefine_11210:HG3_Ill_GATKHC_27072:HG3_Ill_Krunchall_22609:HG3_Ill_manta_3763:HG3_Ill_svaba_21422;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0382166;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0636943;PBcalls=3;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-80;DistBack=8750;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=41;REFWIDENED=18:13106387-13106507;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1588.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:30:0|1:30:5:4:25:0|1:87:2:1:24:0/1:17:6:./.:.:.:.:.:.
chr18	20172049	HG2_Ill_250bpfermikitraw_22723	ATTCCATTCAACAGTCTATCTCGTACCAGTGGAAGCTGGGGAGACAGGATTAGTT	A	20	PASS	ClusterIDs=HG3_PB_HySA_25946:HG3_Ill_svaba_21449:HG2_Ill_svaba_21246:HG3_Ill_manta_3771:HG2_Ill_manta_4620:HG2_Ill_SpiralSDKrefine_7179:HG2_PB_HySA_31398:HG3_Ill_Spiral_17566:HG2_Ill_Spiral_1128:HG3_PB_pbsv_16932:HG3_Ill_Krunchall_22639:HG3_Ill_GATKHC_27114:HG3_Ill_GATKHCSBGrefine_11223:HG3_Ill_250bpfermikitraw_22069:HG3_Ill_150bpfermikitraw_21451:HG3_10X_allpass_3264:HG2_PB_pbsv_17267:HG2_Ill_Krunchall_23055:HG2_Ill_GATKHC_27257:HG2_Ill_GATKHCSBGrefine_11313:HG2_Ill_250bpfermikitraw_22723:HG2_Ill_150bpfermikitraw_21432:HG2_10X_allpass_2650;NumClusterSVs=23;ExactMatchIDs=HG2_10X_allpass_2650:HG2_Ill_150bpfermikitraw_21432:HG2_Ill_250bpfermikitraw_22723:HG2_Ill_GATKHCSBGrefine_11313:HG2_Ill_GATKHC_27257:HG2_Ill_Krunchall_23055:HG2_PB_pbsv_17267:HG3_10X_allpass_3264:HG3_Ill_150bpfermikitraw_21451:HG3_Ill_250bpfermikitraw_22069:HG3_Ill_GATKHCSBGrefine_11223:HG3_Ill_GATKHC_27114:HG3_Ill_Krunchall_22639:HG3_PB_pbsv_16932;NumExactMatchSVs=14;ClusterMaxShiftDist=0.129032;ClusterMaxSizeDiff=0.129032;ClusterMaxEditDist=0.254237;PBcalls=4;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=22327;DistForward=-47;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:20172048-20172104;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1589.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:36:0|1:26:3:0:31:1|0:0:22:28:1:0/1:19:30:./.:.:.:.:.:.
chr18	21903354	HG3_PB_SVrefine2PBcRDovetail_8377	TAAAAATACAAAAATTAGCAGAGACGGGGTTTCACCATCTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGAATACAGGCGTGAGCCACCACACCCAGCCAGGGTGAGGCTTTTTCTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTAAAAAAAAAAAAAAAAATTAGCCAGGAGTGGTGGTGAGCACTTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAGAACTGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAGCTTCACCCTGCCTTTTGAATCCCAGAGAACCTGTTCTGGGCCAACAATGCACCACCAGGCTTTCCCAAGTGCACCAAACATAGTTTTGAATAGTTTTCCTTGGGCAAAGCTCCTCTTTCCTTTTGAACTTCAGCCAGAGGGCCCTCACAGGCAGAAGACTAAATTTCAGATGCTTCTGTCTTGCCCTCTCCCTCCCTCTCAATAAATTTTCTGAAAAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATATCAAATAGATAAACTACATGCATACACATAAAACAATTCCCTCACCCATAGATAACTCACGTGTATACATTGGTGCGTATTTCCAGACTCCCAATAAAAACATGAATATGAATATAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5481:HG4_10X_allpass_3113:HG3_PB_pbsv_16943:HG2_PB_pbsv_17279:HG3_Ill_Krunchall_22652:HG4_PB_assemblyticsfalcon_11168:HG3_PB_assemblyticsfalcon_11353:HG2_PB_assemblyticsfalcon_11372:HG2_PB_assemblyticsPBcR_10995:HG2_Ill_MetaSV_2097:HG2_PB_HySA_31413:HG2_Ill_tnscope_1832:HG4_Ill_MetaSV_2159:HG4_Ill_GATKHCSBGrefine_11666:HG3_Ill_MetaSV_2239:HG3_Ill_GATKHCSBGrefine_11226:HG3_10X_allpass_3265:HG2_Ill_GATKHCSBGrefine_11317:HG2_10X_allpass_2651:HG4_PB_pbsv_17171:HG3_PB_HySA_25962:HG4_PB_SVrefine2PBcRDovetail_8633:HG4_PB_SVrefine2Falcon1Dovetail_10678:HG4_Ill_SVrefine2DISCOVARDovetail_12028:HG3_PB_SVrefine2PBcRDovetail_8377:HG3_PB_SVrefine2Falcon1Dovetail_10673:HG3_Ill_SVrefine2DISCOVARDovetail_12279:HG2_PB_SVrefine2PBcRplusDovetail_4687:HG2_PB_SVrefine2PB10Xhap12_12536:HG2_PB_SVrefine2Falcon2Bionano_8508:HG2_PB_SVrefine2Falcon1plusDovetail_5106;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5481:HG4_PB_SVrefine2PBcRDovetail_8633:HG4_PB_SVrefine2Falcon1Dovetail_10678:HG4_Ill_SVrefine2DISCOVARDovetail_12028:HG3_PB_SVrefine2PBcRDovetail_8377:HG3_PB_SVrefine2Falcon1Dovetail_10673:HG3_Ill_SVrefine2DISCOVARDovetail_12279:HG2_PB_SVrefine2PBcRplusDovetail_4687:HG2_PB_SVrefine2PB10Xhap12_12536:HG2_PB_SVrefine2Falcon2Bionano_8508:HG2_PB_SVrefine2Falcon1plusDovetail_5106;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0996413;ClusterMaxSizeDiff=0.0996413;ClusterMaxEditDist=0.0996413;PBcalls=17;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-1231;DistBack=7570;DistForward=-1214;DistMin=-1214;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=18:21903355-21904603;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0.9935;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=99;MatchId=1590.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:71:1/1:0:28:0:19:1/1:0:14:1:32:1/1:1:22:./.:5:72:1259:.:.
chr18	21990742	HG2_PB_assemblyticsfalcon_11374	CATTCTCAGGAATTATTTGTTTATATGTTTAACTCTGACAGGCTATGGGCTTCTTTTTTTTTTTTTTTTTTTTTGAGATGGAGCCTCGCTGTGTTGCCCAGGCTGGAATGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCTGCCTCCAGGGTTCACGCCATTCTCCTGCCTCAGGCTCCAGAGTAGCTGGGACCACAGGCGCCCACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCACCGGCTATGGGCTTCTTAAAGTCAGAAACTATGTCTTCTTTATTTTTATATCTTCAATATATAGCCAAATTATGGCATAGATCAAGTCTTGATAAATATTCTTGAATAACCAACCTAATGAATACATAAGTTGGATAGGCAGAGTATACATGAAAGCAAGATAGTTTGGGGAAGGTCTTTTTTGTTTTTGTTTTTTTTTTTTTTAATTTAGAGTTTGGCCGGGTGTGGTGGCTCACACTTGTAACCCAGCACTTTGGGAAGCTGAGGCAAGCAGATCACTTGAGGTCAGCAGTTTGAGACCAGCCTGGCCAACATGGTAAAAACCCTGTCTCTACTGAAAATACAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAAAGCCAGTTACTTGGGAGGCTGAGGCACAAGAATCACTGGAGCCCAGGAGGCAGAGGTTGTAGTGAGCTGCGATCACTTCATTGCACTTCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAAAAAAAAATTAGAGACTGGGTCTCTGTTGCCCAGGCTGGAGTGCAGTGATGTGATCATGGCTTACTGCATCCCAAACTCCTGGGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTGCAGGCAGTTGCCACTACCCCTGGCTAATATTTATTTATTTATTTATTTTTTGTAGAGGTAGAGTCTACATTGCCCAGGCTGGTCTCGCACTCCTGGACTCACACAATCCTCCCACCTCAGCCTCCCAAAGTTCTGGGATTACATGCATGAGCCACCACTCCCCACCTAAGAATGTTTTGAATTTGGCTTTGAAGTGTTCTTTCTTTAAAAAAAATTTGTTTCACACCGCTGGACTAGGATGAAATGGCTGTGAAATGTTGAGTTTAAGATGTGACATCTAAGATACCCACTTGTAAATGTCTTATAGATACAGAAAGAGTAGTG	C	20	PASS	ClusterIDs=HG4_Ill_MetaSV_2160:HG4_PB_pbsv_17172:HG2_10X_allpass_2652:HG4_PB_assemblyticsfalcon_11169:HG4_PB_SVrefine2Falcon1Dovetail_10679:HG4_Ill_SVrefine2DISCOVARDovetail_12029:HG4_Ill_GATKHCSBGrefine_11667:HG4_10X_allpass_3114:HG3_PB_pbsv_16944:HG3_PB_assemblyticsfalcon_11354:HG3_PB_SVrefine2Falcon1Dovetail_10674:HG3_10X_allpass_3266:HG2_PB_pbsv_17280:HG2_PB_assemblyticsfalcon_11374:HG2_PB_SVrefine2PB10Xhap12_12537:HG2_PB_SVrefine2Falcon1plusDovetail_5107:HG2_Ill_breakscan11_2470:HG2_Ill_SpiralSDKrefine_7193:HG2_Ill_SVrefine2DISCOVARplusDovetail_5482:HG2_Ill_MetaSV_2098:HG2_10X_SVrefine210Xhap12_11988:HG3_Ill_MetaSV_2240:HG2_Ill_tnscope_1833:HG2_Ill_Krunchall_23069;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11988:HG2_Ill_MetaSV_2098:HG2_Ill_SVrefine2DISCOVARplusDovetail_5482:HG2_Ill_SpiralSDKrefine_7193:HG2_Ill_breakscan11_2470:HG2_PB_SVrefine2Falcon1plusDovetail_5107:HG2_PB_SVrefine2PB10Xhap12_12537:HG2_PB_assemblyticsfalcon_11374:HG2_PB_pbsv_17280:HG3_10X_allpass_3266:HG3_PB_SVrefine2Falcon1Dovetail_10674:HG3_PB_assemblyticsfalcon_11354:HG3_PB_pbsv_16944:HG4_10X_allpass_3114:HG4_Ill_GATKHCSBGrefine_11667:HG4_Ill_SVrefine2DISCOVARDovetail_12029:HG4_PB_SVrefine2Falcon1Dovetail_10679:HG4_PB_assemblyticsfalcon_11169;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00998847;ClusterMaxSizeDiff=0.00998847;ClusterMaxEditDist=0.00998847;PBcalls=10;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1305;DistBack=73402;DistForward=-1305;DistMin=-1305;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:21990743-21992047;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1591.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:34:./.:17:8:11:11:0|1:63:0:0:30:0/1:41:16:0/1:100:47:1311:.:0.998088
chr18	22892480	HG4_PB_pbsv_17178	CAGAAGTTGGAACCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11991:HG2_PB_assemblyticsfalcon_11382:HG4_Ill_Krunchall_23388:HG2_PB_SVrefine2PB10Xhap12_12541:HG2_Ill_Krunchall_23079:HG2_PB_HySA_31421:HG2_PB_pbsv_17285:HG4_Ill_MetaSV_2163:HG2_Ill_tnscope_1834:HG4_PB_pbsv_17178:HG4_PB_SVrefine2Falcon1Dovetail_10684:HG4_Ill_manta_3917:HG4_Ill_SVrefine2DISCOVARDovetail_12033:HG4_Ill_GATKHCSBGrefine_11670:HG4_10X_allpass_3116:HG2_PB_SVrefine2Falcon2Bionano_8511:HG2_PB_SVrefine2Falcon1plusDovetail_5112:HG2_Ill_manta_4623:HG2_Ill_SVrefine2DISCOVARplusDovetail_5485:HG2_Ill_MetaSV_2099:HG2_Ill_GATKHCSBGrefine_11320:HG2_10X_allpass_2653;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11991:HG4_PB_pbsv_17178:HG4_PB_SVrefine2Falcon1Dovetail_10684:HG4_Ill_manta_3917:HG4_Ill_SVrefine2DISCOVARDovetail_12033:HG4_Ill_GATKHCSBGrefine_11670:HG4_10X_allpass_3116:HG2_PB_SVrefine2Falcon2Bionano_8511:HG2_PB_SVrefine2Falcon1plusDovetail_5112:HG2_Ill_manta_4623:HG2_Ill_SVrefine2DISCOVARplusDovetail_5485:HG2_Ill_MetaSV_2099:HG2_Ill_GATKHCSBGrefine_11320:HG2_10X_allpass_2653;NumExactMatchSVs=14;ClusterMaxShiftDist=0.152975;ClusterMaxSizeDiff=0.152975;ClusterMaxEditDist=0.203193;PBcalls=8;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=39284;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=18:22892481-22892818;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1592.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:25:0|1:37:3:0:19:0|1:36:0:0:25:0/1:22:26:0/1:34:10:.:.:.
chr18	23473581	HG2_Ill_GATKHC_27287	CAGAAGTAATGAGTAATGAGTATGGGAATTCCTCCTACTTATAACTAACTTCTTTTCCTTTCTTGGGGTT	C	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_11179:HG4_PB_pbsv_17180:HG4_Ill_svaba_21198:HG4_Ill_scalpel_15667:HG4_Ill_manta_3919:HG4_Ill_Krunchall_23393:HG4_Ill_GATKHC_27209:HG4_Ill_GATKHCSBGrefine_11672:HG4_Ill_Cortex_1495:HG4_Ill_250bpfermikitraw_22369:HG4_Ill_150bpfermikitraw_21531:HG4_CG_vcfBeta_10783:HG4_10X_allpass_3117:HG3_PB_assemblyticsfalcon_11363:HG2_PB_pbsv_17287:HG2_PB_assemblyticsfalcon_11387:HG2_Ill_svaba_21272:HG2_Ill_manta_4624:HG2_Ill_SpiralSDKrefine_7200:HG2_Ill_Krunchall_23082:HG2_Ill_GATKHC_27287:HG2_Ill_GATKHCSBGrefine_11322:HG2_Ill_Cortex_3643:HG2_Ill_250bpfermikitraw_22749:HG2_CG_vcfBeta_9752:HG2_10X_allpass_2654;NumClusterSVs=26;ExactMatchIDs=HG2_10X_allpass_2654:HG2_CG_vcfBeta_9752:HG2_Ill_250bpfermikitraw_22749:HG2_Ill_Cortex_3643:HG2_Ill_GATKHCSBGrefine_11322:HG2_Ill_GATKHC_27287:HG2_Ill_Krunchall_23082:HG2_Ill_SpiralSDKrefine_7200:HG2_Ill_manta_4624:HG2_Ill_svaba_21272:HG2_PB_assemblyticsfalcon_11387:HG2_PB_pbsv_17287:HG3_PB_assemblyticsfalcon_11363:HG4_10X_allpass_3117:HG4_CG_vcfBeta_10783:HG4_Ill_150bpfermikitraw_21531:HG4_Ill_250bpfermikitraw_22369:HG4_Ill_Cortex_1495:HG4_Ill_GATKHCSBGrefine_11672:HG4_Ill_GATKHC_27209:HG4_Ill_Krunchall_23393:HG4_Ill_manta_3919:HG4_Ill_scalpel_15667:HG4_Ill_svaba_21198:HG4_PB_pbsv_17180;NumExactMatchSVs=25;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.120301;PBcalls=5;Illcalls=17;TenXcalls=2;CGcalls=2;PBexactcalls=4;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=2;HG2count=12;HG3count=1;HG4count=13;NumTechs=4;NumTechsExact=4;SVLEN=-69;DistBack=5957;DistForward=-49;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:23473580-23473651;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1593.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:19:./.:21:5:6:14:0|1:46:1:0:36:0/1:38:25:./.:.:.:.:.:.
chr18	23827801	HG4_Ill_SVrefine2DISCOVARDovetail_12038	CTGCACTCCAGCCTGGGCAACAGAACAAGACTCTGTCTCAAAAAAAAGTAAAAAAAATTGAGACAGGGTCTTGCTGTCACCCAGGCTGGAATGCATTAGTACAATCAGGGCTCACTTCAGACTGACCTCCCTAGCATAAGCAGTTCTCCTACGTCAAACCTACTGAGTGACTGGGACTACAGGTGTGCCTCACTATGCCCAGCTAATTTTTTTTTTTTTTTGGTACATTTGGGATCTCACTGTTTCCCAGGCTGGCCTTGAACTCCTGGGCTCAAGTGATCTTCCTGCCTTAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCGACTGCACCTGGCCCCTAATCTCCTTTTTAAATGTCATCTTTATTGAGGTAAAATTTTTGTTATTAAAAAAGGGGAACCTAGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTAAGGCAGGAAGATCACTTGAGCCCAGGAGTTCAAGGCCAGCCTGGGAAACAGTGAGATCCCAAATGTACCAAAAAAAAAAAAAAATTAGCTGGGCATAGTGAGGCACACCTGTAGTCCCAGTCACTCAGTAGGTTTGACGTAGGAGAACTGCTTATGCTAGGGAGGTCAGTCTGAAGTGAGCCCTGATTGTACTAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11994:HG3_PB_HySA_25977:HG3_PB_pbsv_16949:HG4_PB_pbsv_17182:HG2_PB_pbsv_17289:HG4_Ill_MetaSV_2165:HG2_Ill_MetaSV_2101:HG4_PB_HySA_25108:HG4_PB_SVrefine2PBcRDovetail_8638:HG4_PB_SVrefine2Falcon1Dovetail_10687:HG4_Ill_SVrefine2DISCOVARDovetail_12038:HG3_PB_SVrefine2PBcRDovetail_8379:HG3_PB_SVrefine2Falcon1Dovetail_10680:HG3_Ill_SVrefine2DISCOVARDovetail_12284:HG2_PB_SVrefine2PBcRplusDovetail_4691:HG2_PB_SVrefine2PB10Xhap12_12545:HG2_PB_SVrefine2Falcon2Bionano_8513:HG2_PB_SVrefine2Falcon1plusDovetail_5115:HG2_Ill_SVrefine2DISCOVARplusDovetail_5488;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11994:HG4_PB_SVrefine2PBcRDovetail_8638:HG4_PB_SVrefine2Falcon1Dovetail_10687:HG4_Ill_SVrefine2DISCOVARDovetail_12038:HG3_PB_SVrefine2PBcRDovetail_8379:HG3_PB_SVrefine2Falcon1Dovetail_10680:HG3_Ill_SVrefine2DISCOVARDovetail_12284:HG2_PB_SVrefine2PBcRplusDovetail_4691:HG2_PB_SVrefine2PB10Xhap12_12545:HG2_PB_SVrefine2Falcon2Bionano_8513:HG2_PB_SVrefine2Falcon1plusDovetail_5115:HG2_Ill_SVrefine2DISCOVARplusDovetail_5488;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00616333;ClusterMaxSizeDiff=0.00616333;ClusterMaxEditDist=0.00772201;PBcalls=13;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-649;DistBack=33579;DistForward=-153;DistMin=-153;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=546;REFWIDENED=18:23827802-23828996;PctSeqSimilarity=0.9911;PctSizeSimilarity=1;PctRecOverlap=0.9923;SizeDiff=0;StartDistance=-5;EndDistance=-5;GTMatch=0;TruScore=99;MatchId=1594.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:62:1/1:0:28:0:23:0/0:6:0:5:0:0/1:13:2:0/1:6:9:.:.:.
chr18	24045965	HG2_Ill_svaba_21277	AGTGAAGAAACTCTGGCGAGTGGGGGCCTATCCAGGTCGCCACTCTGCCTTCTCCGAGAAAGACCTACCCGCAGGTACGG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5490:HG2_PB_HySA_31432:HG4_PB_pbsv_17183:HG3_PB_pbsv_16950:HG2_PB_pbsv_17290:HG4_Ill_svaba_21203:HG4_Ill_manta_3920:HG4_Ill_Krunchall_23399:HG4_Ill_GATKHCSBGrefine_11674:HG4_Ill_250bpfermikitraw_22374:HG4_Ill_150bpfermikitraw_21538:HG3_Ill_svaba_21470:HG3_Ill_manta_3773:HG3_Ill_Krunchall_22663:HG3_Ill_GATKHCSBGrefine_11231:HG3_Ill_250bpfermikitraw_22098:HG3_10X_allpass_3267:HG2_Ill_svaba_21277:HG2_Ill_SpiralSDKrefine_7204:HG2_Ill_Krunchall_23087:HG2_Ill_GATKHCSBGrefine_11323:HG2_Ill_250bpfermikitraw_22754:HG2_Ill_150bpfermikitraw_21457:HG4_PB_SVrefine2Falcon1Dovetail_10688:HG3_PB_SVrefine2Falcon1Dovetail_10681;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21457:HG2_Ill_250bpfermikitraw_22754:HG2_Ill_GATKHCSBGrefine_11323:HG2_Ill_Krunchall_23087:HG2_Ill_SpiralSDKrefine_7204:HG2_Ill_svaba_21277:HG3_10X_allpass_3267:HG3_Ill_250bpfermikitraw_22098:HG3_Ill_GATKHCSBGrefine_11231:HG3_Ill_Krunchall_22663:HG3_Ill_manta_3773:HG3_Ill_svaba_21470:HG4_Ill_150bpfermikitraw_21538:HG4_Ill_250bpfermikitraw_22374:HG4_Ill_GATKHCSBGrefine_11674:HG4_Ill_Krunchall_23399:HG4_Ill_manta_3920:HG4_Ill_svaba_21203;NumExactMatchSVs=18;ClusterMaxShiftDist=0.025;ClusterMaxSizeDiff=0.025;ClusterMaxEditDist=0.0377358;PBcalls=6;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=17;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-79;DistBack=-14;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=87;REFWIDENED=18:24045953-24046118;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1595.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:15:./.:10:13:18:0:1|0:0:9:17:0:0/1:25:22:./.:.:.:.:.:.
chr18	24571620	HG3_Ill_SVrefine2DISCOVARDovetail_12287	ACTAAGAAGCACCTGCCAGTGAAAGCAGGAGACGATGGTGACTTAGATGCCAAGCAAAGACAGTTTTCTGAGGAGGAGGGAGTGATCAACTGTGTCAAATGTTTCTGACAGGTCTGATGAAGACGAGGACTAAGACCTGACCACTGGATCTAGTAATAGGGTGTTCATTGATGGCCCAGAGCAGTTTTGTAAAGTGATGGAAGTGAAAGTCCCTGTGGAAGGGCTTTGAGAAGGAATGGACAAGAAGAACTCCTTTGAAGAGCATTGCTGCAAGAGGCAGAGCAGTGGGCAGTTGTTGTGAGGGAAAGTAGGGTTAGAAGAGAATATTGAGGATGGGAGGAAGAACGGCATGTTTGTGTGGTGAAGGAATGATCCAGCGAAAAAAGGAAAAATTGATGTTGTTATCTGTCACTTATGTTCTTGTTCATATCCCACCCTGTTCCTATGTTTGGGGATCCCAACTTTGAGGTTGAGCCCACACATCCTAGATTCTCACTTTCCCAGAATCCACAAAGATGGGGCACAGGAACAAGAAGCTCTACTACCAGATGCCTCAGCCCCTCACTCTGAATTAGAAGCGAGTGACATGAAGAACAAATCACACCACATCTATGCTGGAAACAGATGCTAGTGAGCCTTCAGACACAGAAAGTTTGAGAAAAAGAAAAGTGTTATGTTTTCCTTTAAAGGAGTTTATAATCACTGAGGGTGGGGATTGACTG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_23089:HG2_Ill_tnscope_1835:HG4_PB_pbsv_17185:HG4_PB_assemblyticsfalcon_11189:HG4_PB_SVrefine2PBcRDovetail_8639:HG4_PB_SVrefine2Falcon1Dovetail_10689:HG4_Ill_SVrefine2DISCOVARDovetail_12044:HG4_Ill_MetaSV_2166:HG4_Ill_GATKHCSBGrefine_11675:HG4_Ill_Cortex_1497:HG3_PB_assemblyticsfalcon_11373:HG3_PB_SVrefine2Falcon1Dovetail_10682:HG3_Ill_manta_3774:HG3_Ill_SVrefine2DISCOVARDovetail_12287:HG3_Ill_MetaSV_2243:HG3_Ill_GATKHCSBGrefine_11233:HG3_Ill_Cortex_1549:HG3_10X_allpass_3268:HG2_PB_SVrefine2Falcon2Bionano_8514:HG2_PB_SVrefine2Falcon1plusDovetail_5116:HG2_Ill_manta_4625:HG2_Ill_breakscan11_2471:HG2_Ill_SpiralSDKrefine_7205:HG2_Ill_MetaSV_2102:HG2_Ill_GATKHCSBGrefine_11324:HG2_Ill_Cortex_3646:HG2_10X_allpass_2655:HG2_10X_SVrefine210Xhap12_11996:HG2_PB_assemblyticsfalcon_11396:HG4_Ill_Spiral_1334:HG3_Ill_Spiral_17590:HG2_Ill_Spiral_1129:HG2_PB_SVrefine2PBcRplusDovetail_4692:HG2_PB_assemblyticsPBcR_11014:HG2_PB_pbsv_17291:HG4_10X_allpass_3118:HG3_PB_pbsv_16952:HG4_Ill_Krunchall_23401:HG3_Ill_Krunchall_22666;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11996:HG2_10X_allpass_2655:HG2_Ill_Cortex_3646:HG2_Ill_GATKHCSBGrefine_11324:HG2_Ill_MetaSV_2102:HG2_Ill_SpiralSDKrefine_7205:HG2_Ill_breakscan11_2471:HG2_Ill_manta_4625:HG2_PB_SVrefine2Falcon1plusDovetail_5116:HG2_PB_SVrefine2Falcon2Bionano_8514:HG3_10X_allpass_3268:HG3_Ill_Cortex_1549:HG3_Ill_GATKHCSBGrefine_11233:HG3_Ill_MetaSV_2243:HG3_Ill_SVrefine2DISCOVARDovetail_12287:HG3_Ill_manta_3774:HG3_PB_SVrefine2Falcon1Dovetail_10682:HG3_PB_assemblyticsfalcon_11373:HG4_Ill_Cortex_1497:HG4_Ill_GATKHCSBGrefine_11675:HG4_Ill_MetaSV_2166:HG4_Ill_SVrefine2DISCOVARDovetail_12044:HG4_PB_SVrefine2Falcon1Dovetail_10689:HG4_PB_SVrefine2PBcRDovetail_8639:HG4_PB_assemblyticsfalcon_11189:HG4_PB_pbsv_17185;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0193772;ClusterMaxSizeDiff=0.00968858;ClusterMaxEditDist=0.108183;PBcalls=13;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-721;DistBack=-724;DistForward=-689;DistMin=-724;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:24571621-24572341;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1596.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:0|1:34:0:1:30:0|1:71:0:0:37:0/1:40:9:0/1:68:17:.:.:.
chr18	24945078	HG2_PB_HySA_31435	GATCACTAAATATGAGGCAAGGCTTTTTTATTTTTATTAACTGAGTTTCTAAACACTCAGCTACCAGCCCA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_22756:HG3_PB_pbsv_16954:HG2_PB_pbsv_17292:HG3_Ill_SVrefine2DISCOVARDovetail_12289:HG3_Ill_250bpfermikitraw_22103:HG2_PB_SVrefine2PBcRplusDovetail_4693:HG2_PB_SVrefine2PB10Xhap12_12548:HG2_PB_SVrefine2Falcon1plusDovetail_5117:HG2_PB_HySA_31435:HG2_Ill_SVrefine2DISCOVARplusDovetail_5493;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22756:HG3_Ill_SVrefine2DISCOVARDovetail_12289:HG3_Ill_250bpfermikitraw_22103:HG2_PB_SVrefine2PBcRplusDovetail_4693:HG2_PB_SVrefine2PB10Xhap12_12548:HG2_PB_SVrefine2Falcon1plusDovetail_5117:HG2_PB_HySA_31435:HG2_Ill_SVrefine2DISCOVARplusDovetail_5493;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0431655;ClusterMaxSizeDiff=0.0431655;ClusterMaxEditDist=0.0729927;PBcalls=6;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=62262;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=189;REFWIDENED=18:24945079-24945337;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1597.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:42:0|1:22:1:3:36:./.:0:3:15:0:0/1:20:12:./.:.:.:.:.:.
chr18	25827876	HG2_Ill_GATKHCSBGrefine_11328	AAAGATGAAGTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTGCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_1130:HG4_10X_allpass_3119:HG4_PB_assemblyticsfalcon_11195:HG3_PB_assemblyticsfalcon_11377:HG2_PB_assemblyticsfalcon_11405:HG2_PB_assemblyticsPBcR_11021:HG2_PB_PB10Xdip_14079:HG2_PB_pbsv_17295:HG2_PB_SVrefine2PB10Xhap12_12551:HG4_PB_pbsv_17187:HG3_PB_pbsv_16958:HG4_PB_SVrefine2PBcRDovetail_8640:HG4_Ill_scalpel_15676:HG4_Ill_GATKHCSBGrefine_11677:HG3_PB_SVrefine2PBcRDovetail_8381:HG3_PB_HySA_25992:HG3_Ill_scalpel_16427:HG3_Ill_manta_3777:HG3_Ill_SVrefine2DISCOVARDovetail_12291:HG3_Ill_GATKHCSBGrefine_11237:HG3_10X_allpass_3269:HG2_PB_SVrefine2PBcRplusDovetail_4694:HG2_PB_SVrefine2PB10Xhap12_12550:HG2_PB_SVrefine2Falcon2Bionano_8516:HG2_PB_SVrefine2Falcon1plusDovetail_5119:HG2_Ill_scalpel_16090:HG2_Ill_manta_4627:HG2_Ill_GATKHCSBGrefine_11328:HG2_10X_SVrefine210Xhap12_11999:HG4_PB_SVrefine2Falcon1Dovetail_10691:HG4_Ill_Spiral_1335:HG3_PB_SVrefine2Falcon1Dovetail_10684:HG3_Ill_Spiral_17601:HG3_Ill_MetaSV_2244:HG2_Ill_tnscope_1836:HG2_Ill_breakscan11_2472;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11999:HG2_Ill_GATKHCSBGrefine_11328:HG2_Ill_manta_4627:HG2_Ill_scalpel_16090:HG2_PB_SVrefine2Falcon1plusDovetail_5119:HG2_PB_SVrefine2Falcon2Bionano_8516:HG2_PB_SVrefine2PB10Xhap12_12550:HG2_PB_SVrefine2PBcRplusDovetail_4694:HG3_10X_allpass_3269:HG3_Ill_GATKHCSBGrefine_11237:HG3_Ill_SVrefine2DISCOVARDovetail_12291:HG3_Ill_manta_3777:HG3_Ill_scalpel_16427:HG3_PB_HySA_25992:HG3_PB_SVrefine2PBcRDovetail_8381:HG4_Ill_GATKHCSBGrefine_11677:HG4_Ill_scalpel_15676:HG4_PB_SVrefine2PBcRDovetail_8640;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0949464;ClusterMaxSizeDiff=0.0949464;ClusterMaxEditDist=0.0949464;PBcalls=18;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=-126;DistForward=-334;DistMin=-334;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=18:25827877-25828225;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1598.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:35:0|1:24:0:0:33:1|0:0:37:50:0:0/1:19:9:0/1:22:9:.:.:.
chr18	26363743	HG2_PB_SVrefine2Falcon1plusDovetail_5122	CAAAAGAAAAGGCATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2473:HG2_10X_allpass_2656:HG4_PB_pbsv_17192:HG4_Ill_Krunchall_23411:HG3_Ill_Krunchall_22682:HG2_PB_pbsv_17300:HG2_Ill_Krunchall_23097:HG2_PB_assemblyticsPBcR_11028:HG4_PB_assemblyticsfalcon_11205:HG3_PB_assemblyticsfalcon_11383:HG2_PB_assemblyticsfalcon_11412:HG4_Ill_Spiral_1336:HG3_PB_pbsv_16962:HG3_PB_HySA_25997:HG3_Ill_MetaSV_2247:HG2_PB_HySA_31445:HG2_Ill_tnscope_1838:HG2_Ill_MetaSV_2107:HG4_PB_SVrefine2Falcon1Dovetail_10695:HG4_Ill_scalpel_15680:HG4_Ill_manta_3921:HG4_Ill_SVrefine2DISCOVARDovetail_12048:HG4_Ill_MetaSV_2170:HG4_Ill_GATKHCSBGrefine_11680:HG4_10X_allpass_3121:HG3_PB_SVrefine2PBcRDovetail_8385:HG3_PB_SVrefine2Falcon1Dovetail_10687:HG3_Ill_scalpel_16431:HG3_Ill_manta_3779:HG3_Ill_SVrefine2DISCOVARDovetail_12293:HG3_Ill_GATKHCSBGrefine_11240:HG3_10X_allpass_3270:HG2_PB_SVrefine2PBcRplusDovetail_4697:HG2_PB_SVrefine2PB10Xhap12_12555:HG2_PB_SVrefine2Falcon2Bionano_8519:HG2_PB_SVrefine2Falcon1plusDovetail_5122:HG2_Ill_scalpel_16093:HG2_Ill_manta_4629:HG2_Ill_SVrefine2DISCOVARplusDovetail_5498:HG2_Ill_GATKHCSBGrefine_11329:HG2_10X_SVrefine210Xhap12_12004;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12004:HG2_Ill_GATKHCSBGrefine_11329:HG2_Ill_SVrefine2DISCOVARplusDovetail_5498:HG2_Ill_manta_4629:HG2_Ill_scalpel_16093:HG2_PB_SVrefine2Falcon1plusDovetail_5122:HG2_PB_SVrefine2Falcon2Bionano_8519:HG2_PB_SVrefine2PB10Xhap12_12555:HG2_PB_SVrefine2PBcRplusDovetail_4697:HG3_10X_allpass_3270:HG3_Ill_GATKHCSBGrefine_11240:HG3_Ill_SVrefine2DISCOVARDovetail_12293:HG3_Ill_manta_3779:HG3_Ill_scalpel_16431:HG3_PB_SVrefine2Falcon1Dovetail_10687:HG3_PB_SVrefine2PBcRDovetail_8385:HG4_10X_allpass_3121:HG4_Ill_GATKHCSBGrefine_11680:HG4_Ill_MetaSV_2170:HG4_Ill_SVrefine2DISCOVARDovetail_12048:HG4_Ill_manta_3921:HG4_Ill_scalpel_15680:HG4_PB_SVrefine2Falcon1Dovetail_10695;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0919176;ClusterMaxSizeDiff=0.0919176;ClusterMaxEditDist=0.0919176;PBcalls=16;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-357;DistForward=4209;DistMin=-357;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=18:26363744-26364079;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1599.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:./.:0:1:0:3:1/1:0:15:0:18:1/1:0:52:0/1:2:12:.:.:.
chr18	27872570	HG2_Ill_manta_4634	TAGAAATATATTTATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGGGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12008:HG2_10X_allpass_2657:HG2_PB_pbsv_17311:HG3_Ill_Krunchall_22692:HG2_PB_assemblyticsPBcR_11045:HG2_PB_assemblyticsfalcon_11429:HG2_PB_SVrefine2PB10Xhap12_12560:HG4_PB_assemblyticsfalcon_11224:HG4_PB_SVrefine2Falcon1Dovetail_10703:HG3_Ill_MetaSV_2252:HG2_Ill_tnscope_1839:HG3_PB_pbsv_16980:HG3_PB_SVrefine2PBcRDovetail_8394:HG3_Ill_scalpel_16441:HG3_Ill_manta_3784:HG3_Ill_SVrefine2DISCOVARDovetail_12298:HG3_Ill_GATKHCSBGrefine_11254:HG3_10X_allpass_3272:HG2_PB_SVrefine2PBcRplusDovetail_4700:HG2_PB_SVrefine2PB10Xhap12_12559:HG2_PB_SVrefine2Falcon1plusDovetail_5127:HG2_Ill_manta_4634:HG2_Ill_MetaSV_2109:HG2_Ill_GATKHCSBGrefine_11338;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12008:HG3_PB_pbsv_16980:HG3_PB_SVrefine2PBcRDovetail_8394:HG3_Ill_scalpel_16441:HG3_Ill_manta_3784:HG3_Ill_SVrefine2DISCOVARDovetail_12298:HG3_Ill_GATKHCSBGrefine_11254:HG3_10X_allpass_3272:HG2_PB_SVrefine2PBcRplusDovetail_4700:HG2_PB_SVrefine2PB10Xhap12_12559:HG2_PB_SVrefine2Falcon1plusDovetail_5127:HG2_Ill_manta_4634:HG2_Ill_MetaSV_2109:HG2_Ill_GATKHCSBGrefine_11338;NumExactMatchSVs=14;ClusterMaxShiftDist=0.101852;ClusterMaxSizeDiff=0.101852;ClusterMaxEditDist=0.101852;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=61533;DistForward=76290;DistMin=61533;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=18:27872571-27872915;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1600.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:61:./.:16:28:13:23:1|0:0:10:28:0:0/1:28:26:0/1:13:4:.:.:.
chr18	32530960	HG2_Ill_manta_4637	AATTGTAATTTGCACTTGAGATATTGAATTTTATTGTTGCCACCAAATTCTGTTGTTTTCCTTAGAGTGACAGCAGATTCAGTTCATTCATTTTCTACAAATATACATGCAGAATACTTAAGTCTAAATAATTACGTTTGTCTCATAGCCATTCTTTGAAGTAAAATGGTGTACCATGAAAAAAGAAGTTTAGTTTAGCTCACAACGCTATCACAGGAGTGCTTTTCCTCAACACAACCAACATACTTCAGTATAAAATGAAAACATTTGTGGGTAC	GTGCAAA	20	PASS	ClusterIDs=HG4_PB_pbsv_17216:HG2_Ill_tnscope_1840:HG4_PB_SVrefine2PBcRDovetail_8651:HG4_PB_SVrefine2Falcon1Dovetail_10713:HG4_Ill_manta_3928:HG4_Ill_SVrefine2DISCOVARDovetail_12072:HG4_Ill_Cortex_1505:HG3_PB_assemblyticsfalcon_11429:HG3_PB_SVrefine2PBcRDovetail_8403:HG3_PB_SVrefine2Falcon1Dovetail_10705:HG3_Ill_manta_3788:HG3_Ill_SVrefine2DISCOVARDovetail_12311:HG3_Ill_Cortex_1558:HG2_PB_assemblyticsfalcon_11458:HG2_PB_assemblyticsPBcR_11080:HG2_PB_SVrefine2PBcRplusDovetail_4713:HG2_PB_SVrefine2PB10Xhap12_12574:HG2_PB_SVrefine2Falcon2Bionano_8533:HG2_PB_SVrefine2Falcon1plusDovetail_5143:HG2_PB_PB10Xdip_14115:HG2_Ill_manta_4637:HG2_Ill_SVrefine2DISCOVARplusDovetail_5517:HG2_Ill_Cortex_3665:HG2_10X_SVrefine210Xhap12_12021:HG4_PB_assemblyticsfalcon_11251:HG2_Ill_SpiralSDKrefine_7242:HG4_Ill_MetaSV_2175:HG2_Ill_MetaSV_2115:HG4_Ill_Spiral_1339:HG3_Ill_Spiral_17641:HG2_Ill_Spiral_1132:HG2_PB_HySA_31495:HG4_10X_allpass_3124:HG3_10X_allpass_3275:HG2_10X_allpass_2658:HG4_Ill_Krunchall_23452:HG3_Ill_Krunchall_22720:HG2_Ill_Krunchall_23136:HG3_PB_pbsv_16992:HG2_PB_pbsv_17323;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12021:HG2_Ill_Cortex_3665:HG2_Ill_SVrefine2DISCOVARplusDovetail_5517:HG2_Ill_manta_4637:HG2_PB_PB10Xdip_14115:HG2_PB_SVrefine2Falcon1plusDovetail_5143:HG2_PB_SVrefine2Falcon2Bionano_8533:HG2_PB_SVrefine2PB10Xhap12_12574:HG2_PB_SVrefine2PBcRplusDovetail_4713:HG2_PB_assemblyticsPBcR_11080:HG2_PB_assemblyticsfalcon_11458:HG3_Ill_Cortex_1558:HG3_Ill_SVrefine2DISCOVARDovetail_12311:HG3_Ill_manta_3788:HG3_PB_SVrefine2Falcon1Dovetail_10705:HG3_PB_SVrefine2PBcRDovetail_8403:HG3_PB_assemblyticsfalcon_11429:HG4_Ill_Cortex_1505:HG4_Ill_SVrefine2DISCOVARDovetail_12072:HG4_Ill_manta_3928:HG4_PB_SVrefine2Falcon1Dovetail_10713;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0364963;ClusterMaxSizeDiff=0.0364963;ClusterMaxEditDist=0.0474453;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-270;DistBack=-217;DistForward=-209;DistMin=-217;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:32530960-32531236;PctSeqSimilarity=0.964;PctSizeSimilarity=0.989;PctRecOverlap=0.9856;SizeDiff=-3;StartDistance=1;EndDistance=4;GTMatch=0;TruScore=97;MatchId=1601.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:70:./.:0:2:0:2:1/1:0:26:0:19:1/1:0:37:./.:.:.:.:.:.
chr18	35306061	HG2_Ill_manta_4639	AAAGCTCACAGTGCTGAGTCCCAGGGTCTTATAATACACTTCTGAAATACTCCTTCTCTAAGCTCTGTGTTGGCTAAATTCTAGGGCAAGGCCGAACATCAGTCTCAGAATGTTTTCTTAAATAAGGGAATGGAAAAAAGCAGAAACCATCCAGCCTTGTCCCAATGCACAGACTTGCTCTGTTCCCTTACGGTGAATGCATTCTCTTTAGGCCCACCCTGTTTTTTCACGCCATCCAACTGGAGCCAGTGTTTATTTCCAAGGTTGTGTTATATGATGGGGAAAAGTTCTCTGGAGGAAAATTCTGGGGCTCATTAAACAGTGGGTAGAAGAGGAGGAAAGAATGAGGGAGGGAAGTAAAGAGAAAATTATACCAGGATGATGTTTTCTTTTCCTGTAGGAAAGAATCTAAAATAATTGCATCTCTTGTTTAGAGCATTTTTATTTTTCACACTTCATTCCTGTTGATGCAAAGGAATGAGTTACGAGATTGCATTCTTAGGGGGAAACTCTCCCCAGGAAATACATTGCTGTGTCCACAGGACTTTTTAGGTCATTGAGGGAATGGGTTG	TGTATTTTGA	20	PASS	ClusterIDs=HG2_Ill_svaba_21346:HG4_PB_pbsv_17225:HG2_10X_allpass_2660:HG2_Ill_tnscope_1841:HG4_PB_SVrefine2PBcRDovetail_8656:HG4_PB_SVrefine2Falcon1Dovetail_10718:HG4_Ill_manta_3931:HG4_Ill_SVrefine2DISCOVARDovetail_12088:HG3_PB_SVrefine2Falcon1Dovetail_10712:HG2_PB_assemblyticsPBcR_11091:HG2_PB_SVrefine2PBcRplusDovetail_4717:HG2_PB_SVrefine2PB10Xhap12_12581:HG2_PB_SVrefine2Falcon2Bionano_8539:HG2_Ill_manta_4639:HG2_10X_SVrefine210Xhap12_12028:HG2_Ill_SpiralSDKrefine_7255:HG4_Ill_Spiral_1340:HG2_Ill_Spiral_1133:HG2_Ill_MetaSV_2117:HG2_PB_pbsv_17332:HG4_Ill_Krunchall_23475:HG2_Ill_Krunchall_23151:HG4_Ill_MetaSV_2179:HG4_Ill_svaba_21288;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12028:HG2_Ill_manta_4639:HG2_PB_SVrefine2Falcon2Bionano_8539:HG2_PB_SVrefine2PB10Xhap12_12581:HG2_PB_SVrefine2PBcRplusDovetail_4717:HG2_PB_assemblyticsPBcR_11091:HG3_PB_SVrefine2Falcon1Dovetail_10712:HG4_Ill_SVrefine2DISCOVARDovetail_12088:HG4_Ill_manta_3931:HG4_PB_SVrefine2Falcon1Dovetail_10718:HG4_PB_SVrefine2PBcRDovetail_8656;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0246479;ClusterMaxSizeDiff=0.0246479;ClusterMaxEditDist=0.0246479;PBcalls=9;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-562;DistBack=-9879;DistForward=-572;DistMin=-9879;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:35306061-35306632;PctSeqSimilarity=0.958;PctSizeSimilarity=0.9947;PctRecOverlap=0.9878;SizeDiff=-3;StartDistance=1;EndDistance=7;GTMatch=0;TruScore=98;MatchId=1602.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:23:./.:9:19:15:2:0|1:34:0:0:15:0/1:60:21:0/1:34:11:.:.:.
chr18	35315621	HG2_Ill_SpiralSDKrefine_7256	ACCTACTGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGGGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12584:HG4_Ill_Krunchall_23476:HG3_Ill_Krunchall_22741:HG2_Ill_Krunchall_23152:HG4_Ill_Spiral_1341:HG3_Ill_Spiral_17656:HG2_Ill_Spiral_1134:HG4_PB_pbsv_17226:HG3_PB_pbsv_17003:HG2_PB_pbsv_17333:HG3_PB_HySA_26054:HG4_PB_HySA_25178:HG4_Ill_MetaSV_2180:HG3_Ill_MetaSV_2261:HG2_Ill_tnscope_1842:HG2_Ill_MetaSV_2118:HG4_PB_SVrefine2PBcRDovetail_8657:HG4_PB_SVrefine2Falcon1Dovetail_10719:HG4_Ill_svaba_21289:HG4_Ill_scalpel_15723:HG4_Ill_manta_3932:HG4_Ill_SVrefine2DISCOVARDovetail_12089:HG4_Ill_GATKHCSBGrefine_11712:HG3_PB_SVrefine2Falcon1Dovetail_10713:HG3_Ill_svaba_21550:HG3_Ill_scalpel_16472:HG3_Ill_manta_3793:HG3_Ill_GATKHCSBGrefine_11269:HG3_10X_allpass_3278:HG2_PB_SVrefine2Falcon2Bionano_8540:HG2_PB_SVrefine2Falcon1plusDovetail_5149:HG2_Ill_svaba_21347:HG2_Ill_scalpel_16136:HG2_Ill_SpiralSDKrefine_7256:HG2_Ill_GATKHCSBGrefine_11357:HG2_10X_allpass_2661:HG2_10X_SVrefine210Xhap12_12029:HG2_Ill_breakscan11_2475;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12029:HG2_10X_allpass_2661:HG2_Ill_GATKHCSBGrefine_11357:HG2_Ill_SpiralSDKrefine_7256:HG2_Ill_scalpel_16136:HG2_Ill_svaba_21347:HG2_PB_SVrefine2Falcon1plusDovetail_5149:HG2_PB_SVrefine2Falcon2Bionano_8540:HG3_10X_allpass_3278:HG3_Ill_GATKHCSBGrefine_11269:HG3_Ill_manta_3793:HG3_Ill_scalpel_16472:HG3_Ill_svaba_21550:HG3_PB_SVrefine2Falcon1Dovetail_10713:HG4_Ill_GATKHCSBGrefine_11712:HG4_Ill_SVrefine2DISCOVARDovetail_12089:HG4_Ill_manta_3932:HG4_Ill_scalpel_15723:HG4_Ill_svaba_21289:HG4_PB_SVrefine2Falcon1Dovetail_10719:HG4_PB_SVrefine2PBcRDovetail_8657;NumExactMatchSVs=21;ClusterMaxShiftDist=0.137195;ClusterMaxSizeDiff=0.137195;ClusterMaxEditDist=0.137615;PBcalls=11;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-11;DistForward=-304;DistMin=-304;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=18:35315622-35315954;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1603.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:40:./.:8:24:37:6:0|1:19:0:0:30:0/1:19:15:0/1:22:6:.:.:.
chr18	37061632	HG3_PB_SVrefine2PBcRDovetail_8413	TAAAGAATCAGATTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2476:HG2_10X_allpass_2662:HG3_PB_pbsv_17013:HG3_Ill_Krunchall_22755:HG4_PB_assemblyticsfalcon_11283:HG3_PB_assemblyticsfalcon_11461:HG2_PB_assemblyticsfalcon_11487:HG4_PB_HySA_25193:HG2_PB_HySA_31522:HG4_Ill_Krunchall_23489:HG3_Ill_Krunchall_22754:HG2_Ill_Krunchall_23163:HG4_PB_pbsv_17237:HG2_PB_pbsv_17341:HG4_Ill_MetaSV_2183:HG2_Ill_tnscope_1843:HG2_Ill_MetaSV_2122:HG4_PB_SVrefine2PBcRDovetail_8662:HG4_PB_SVrefine2Falcon1Dovetail_10723:HG4_Ill_scalpel_15730:HG4_Ill_manta_3936:HG4_Ill_SVrefine2DISCOVARDovetail_12098:HG4_Ill_GATKHCSBGrefine_11721:HG4_10X_allpass_3126:HG3_PB_SVrefine2PBcRDovetail_8413:HG3_PB_SVrefine2Falcon1Dovetail_10717:HG3_PB_HySA_26071:HG3_Ill_scalpel_16483:HG3_Ill_manta_3795:HG3_Ill_SVrefine2DISCOVARDovetail_12331:HG3_Ill_GATKHCSBGrefine_11274:HG3_10X_allpass_3279:HG2_PB_SVrefine2PBcRplusDovetail_4724:HG2_PB_SVrefine2PB10Xhap12_12589:HG2_PB_SVrefine2Falcon2Bionano_8547:HG2_PB_SVrefine2Falcon1plusDovetail_5155:HG2_Ill_scalpel_16145:HG2_Ill_manta_4643:HG2_Ill_SVrefine2DISCOVARplusDovetail_5538:HG2_Ill_GATKHCSBGrefine_11364:HG2_10X_SVrefine210Xhap12_12033;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12033:HG2_Ill_GATKHCSBGrefine_11364:HG2_Ill_SVrefine2DISCOVARplusDovetail_5538:HG2_Ill_manta_4643:HG2_Ill_scalpel_16145:HG2_PB_SVrefine2Falcon1plusDovetail_5155:HG2_PB_SVrefine2Falcon2Bionano_8547:HG2_PB_SVrefine2PB10Xhap12_12589:HG2_PB_SVrefine2PBcRplusDovetail_4724:HG3_10X_allpass_3279:HG3_Ill_GATKHCSBGrefine_11274:HG3_Ill_SVrefine2DISCOVARDovetail_12331:HG3_Ill_manta_3795:HG3_Ill_scalpel_16483:HG3_PB_HySA_26071:HG3_PB_SVrefine2Falcon1Dovetail_10717:HG3_PB_SVrefine2PBcRDovetail_8413:HG4_10X_allpass_3126:HG4_Ill_GATKHCSBGrefine_11721:HG4_Ill_SVrefine2DISCOVARDovetail_12098:HG4_Ill_manta_3936:HG4_Ill_scalpel_15730:HG4_PB_SVrefine2Falcon1Dovetail_10723:HG4_PB_SVrefine2PBcRDovetail_8662;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0832049;ClusterMaxSizeDiff=0.0832049;ClusterMaxEditDist=0.0832049;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=-519;DistForward=5051;DistMin=-519;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7981;REFWIDENED=18:37053666-37071859;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1605.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:63:1/1:1:32:1:12:1/1:0:17:0:12:1/1:0:41:./.:2:19:.:.:.
chr18	37067014	HG2_Ill_GATKHC_27375	CAATGAACAAAGGGAAAACTATTTTTTGAAGGAGTGCCTTTTTAAATAATATAAGAAAA	C	20	PASS	ClusterIDs=HG2_PB_HySA_31523:HG4_PB_HySA_25194:HG4_PB_pbsv_17238:HG4_PB_assemblyticsfalcon_11284:HG4_Ill_svaba_21303:HG4_Ill_scalpel_15731:HG4_Ill_manta_3937:HG4_Ill_Krunchall_23490:HG4_Ill_GATKHC_27322:HG4_Ill_GATKHCSBGrefine_11722:HG4_Ill_Cortex_1515:HG4_Ill_250bpfermikitraw_22467:HG4_Ill_150bpfermikitraw_21620:HG4_CG_vcfBeta_10830:HG4_10X_allpass_3127:HG3_PB_pbsv_17014:HG3_Ill_svaba_21566:HG3_Ill_manta_3796:HG3_Ill_Krunchall_22756:HG3_Ill_GATKHC_27237:HG3_Ill_GATKHCSBGrefine_11275:HG3_Ill_Cortex_1564:HG3_Ill_250bpfermikitraw_22178:HG3_Ill_150bpfermikitraw_21552:HG3_CG_vcfBeta_9281:HG3_10X_allpass_3280:HG2_PB_pbsv_17342:HG2_PB_assemblyticsfalcon_11488:HG2_PB_assemblyticsPBcR_11106:HG2_Ill_svaba_21359:HG2_Ill_scalpel_16146:HG2_Ill_manta_4644:HG2_Ill_SpiralSDKrefine_7262:HG2_Ill_Krunchall_23164:HG2_Ill_GATKHC_27375:HG2_Ill_GATKHCSBGrefine_11365:HG2_Ill_Cortex_3678:HG2_Ill_250bpfermikitraw_22832:HG2_Ill_150bpfermikitraw_21529:HG2_CG_vcfBeta_9797:HG2_10X_allpass_2663:HG2_Ill_breakscan11_2477;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_2663:HG2_CG_vcfBeta_9797:HG2_Ill_150bpfermikitraw_21529:HG2_Ill_250bpfermikitraw_22832:HG2_Ill_Cortex_3678:HG2_Ill_GATKHCSBGrefine_11365:HG2_Ill_GATKHC_27375:HG2_Ill_Krunchall_23164:HG2_Ill_SpiralSDKrefine_7262:HG2_Ill_manta_4644:HG2_Ill_scalpel_16146:HG2_Ill_svaba_21359:HG2_PB_assemblyticsPBcR_11106:HG2_PB_assemblyticsfalcon_11488:HG2_PB_pbsv_17342:HG3_10X_allpass_3280:HG3_CG_vcfBeta_9281:HG3_Ill_150bpfermikitraw_21552:HG3_Ill_250bpfermikitraw_22178:HG3_Ill_Cortex_1564:HG3_Ill_GATKHCSBGrefine_11275:HG3_Ill_GATKHC_27237:HG3_Ill_Krunchall_22756:HG3_Ill_manta_3796:HG3_Ill_svaba_21566:HG3_PB_pbsv_17014:HG4_10X_allpass_3127:HG4_CG_vcfBeta_10830:HG4_Ill_150bpfermikitraw_21620:HG4_Ill_250bpfermikitraw_22467:HG4_Ill_Cortex_1515:HG4_Ill_GATKHCSBGrefine_11722:HG4_Ill_GATKHC_27322:HG4_Ill_Krunchall_23490:HG4_Ill_manta_3937:HG4_Ill_scalpel_15731:HG4_Ill_svaba_21303:HG4_PB_assemblyticsfalcon_11284:HG4_PB_pbsv_17238;NumExactMatchSVs=39;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.0338983;PBcalls=8;Illcalls=28;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=27;TenXexactcalls=3;CGexactcalls=3;HG2count=17;HG3count=11;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-58;DistBack=5051;DistForward=61455;DistMin=5051;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:37067013-37067073;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1606.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:64:1/1:3:15:1:6:1/1:0:15:0:18:1/1:0:40:./.:.:.:.:.:.
chr18	38864785	HG2_PB_SVrefine2Falcon2Bionano_8553	ATGAAAGTAAGTTTTGTGTGTGTTTGTGTGAATCTTGACAAACTGATTTTAAAGTTCATATGGAGAGGAAAATGACCCAGAATAGCCACCACAATGTTGAGGGAGAACAAAGTGAGAAGACAGCACTACCCAACTTCAAGACTTGCTGAAAAGCTACAGCAATCAAGATAGTGAGGTATTGGTAAAAGATAAAAAAACAGGTCAATGAAACAACATAGTGTACTCAGACATAACCCACATAATATACTCAACTGATCTTTGACAAAGGTGCAAGTTCAAGACAATGGAGCAAAGATAGTCTTTTCAATAAATAGTGGTAAGAAAACTAGGCATAACATGCAAGAATAAAATGTAAATCTAGATATAGACCTTATGATCTTCACAAAAATTAATTCAAAATGAACTTTAGAGCTCAATTTAAAATGTAAAATTATAAAGCTCCTAGAAGGTAACATCAGAGAGAAACTAGGTGACCTTGGTTTGGTGTTAACTTTTTAGAAACAACACCAGAAGTATGACCCATGAAAGAAAGAATTGATAAGCTGGACTTAACTAAAATTAAATACTTCTGTTTTGAGAAAGGCACTATCAAGATCATTGGACCACAAGCAACAGACTGAAAGAAAATATCTGCAAAAGATAGATCTGATAAAGGCGAGTCATTTAAAATATTCAAATATCTTTGAAAACTCAACCATAAGAACCCAAAAAACCTAGTTAAAAAATGGGCAAAATGTCTGAATAGGCACCCTACCAAAGAAGATATAGATAAGGTAAATGATCATATGAAAAGATATTCAACATCTTATGTCATTAGGGAATTGCAAACTCAAACAACAGTGAGATGCCGCTGCACACCAATTAGAATGGCCAAAATTCAAAACACAGCACCAAATACTGGCCAGGGTGTGATGAAACAGAAACTTACTCATCTTTGGTAGAAATGCAAAATGGTATAGCCACTTTGGAAGACAGTTTGATAGTTTCTTTAAAAAGTAAACATGTTCTTACCATACATATGATCTTGAAATCATGCCACTTGGCATTTACCCAAAGGAGCTGAAAACTATATCCACACAAAATCCTGCACATGGATGTTTATGACAACTTTATTTACAATTGCCAAAGGTTTGAAGCAACCAAGATGTCCTTTAGTAGATTGATACATAAACTGTGGTACATCCAGACAATGAAATATTGTATTTTTCCATTTTCACACTGCTGATAAAGACATACCCAAGACTGCATAATTTATACAGGAAAAGGGTTTAATGGACTTACACTTCCATGTGGCTGGGGAGGCCTCACAATCATGGAAGAAGTCAAGGAGGAGCAAGTCACATCTTACATAGATGGCAGCAGGCAAAGAGAGCTTGTGCAGGGAAAAATCCCATTTTTAAAACCATAAAATCTCATGAGACGTATTCACTGTCAGAAGAACAGCACAGGAAAGACCTGCCCCCATGATTCACTACCTCCCACCAGGTTCCTCCTATGACATGTGGGAACTGTGGGAGTTACAATTCAAGATGAGATCTGGGTGGGGACACAGCCAAACCTTATCAAATATTATTTAGCATTAAAAAAACTGTAAAGCCATAAAAATATATGGACAAAACTTAAATGAATATTATTAACTGAAAGAAGACAATCTTAAAAAAAGACATACTGTGTAATTCCAAATATACGGTATTCTGGAAAAGTCAAAATGTGGAGATAATACAATTAAAGTGGCTGAGAATGGTGGCTCACGTCTGTCATATTAGTACTTGGCAGGCTGATATGGCATCATCACTTAAGGCCAAGGGTTTGAGGCTAGCCTGGGCATCACAGCAAGAACCCATCCCTACAAGAAAAATTTTTAAAAGTTACCTAGACATGGTGGCATACGCCTGTAGTCATAGCTACTTGGGAGGCTGGGGCAAGAAGATTGCTTGAGCCCCGGAATTTCAGGCTGCAGTGACCTATGCTAATGCCACTGCTCTCCTGCCTGAGTGACAGAGTGAGATTCTGTCTCTTAAAAACAAACAAACAAACAAAAAGATTGAAGGGATGAATAGGTAGAGCACAGACAAGTCTTAGGTCTGTCAATATTCTGTATGATACTATAATAATGGATGTATGTCATCATACATTTATTTATATCCACAGAATGTAAAACACCAGGAGTAAATTCTATTTTAAACTCTGGGCGTTTTGTGATAATGATGCATTAATGAAAGTTCATCAGTGATGTAACAAATGCACTACTGCCATGTGGAATGTTGATACTGGGGGAGTTTGCCATGTGTGAGGACAGCAGGTATATGAAAACTCCCTGCACTTTCTGCTTAATTTTGCTGTGAACCTAAAGCTGCTCTATATAATAAAGTTTATTAATTAAAAAAACCTCTGTTACAGCAAAATTGAGTAACAGACACCATATTTTTCCTCCTGCCCCCCCCCCCAAAATTAACAAAGTATAGAAAACAATGACTCTGAGAAGAGTGAACATTAGACAGTGAGGACATTGTTTCCTGAGAGAGGAAAAAATAATAATAATATGTAACAAATGATTTCCCCAGCTTACTGCTCACATAGTTTCTAAGCCATGATGCAAAAACAGGGCTAGTTCATGGCAATTTTGACAGGATTCACTTATGTCACCCCAAATCTCTCAAGTTTTGTCAGTATTCCAGTTCAGTCAGGCAAAGAATGGCTGAGTAAACAAGAAGCTTTGTTATTTCTTTCAGTGTTGGTTTCTATACCTCAAAATACCTCAGTAAATCTCAAGTAGAATAAATTGAAATAAGATAAACACAAATAATCTTAACACATTATAGTTAAGTTGAATGCCACAGACAAAGGAAATATTTTGAAAGCAACAAGATGAAAACAACATATATGCAGATGTACAATATCATTAATGACTGTTTTTATGCCAGAAATAAAATAGGCCAGAAACCAATGCAATGACAAATTGTTTGAATGAAATGTCAGCCAACTATTCTATATTCGGCAAAGCTACTTAAATGAAATGGACCACCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCATGAGGTCAAGATATAGAGACCATCCTGGACAACATGGTGAAATCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGCGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGGAGGAGAACCTCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCAGAGATTGCACCACTACACTCCAGCCTGGTGACAAAGCGAGACACTGTCTCAAAAATATATATATATATATAATAAAAATAAGATGAAATACAGACATCCTCAGATGAACAAAGACTCGAGTAATTCATGGCTAGCAGGCATGACTTAAAGGAAAAACTAACGGAAACCCTGTAGGCCAAAGGAACGTAACACTAGACAGTAACTCTAACTCTAATTCAAGAGAGAATGTGCAGGAAGCCATAAACAGTAAACATAATAATCTATATTATGTAATTTAATAAAAAATACATTGCTTTAAAAATCCTTTTCTTA	CTCTTTTAAG	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2126:HG3_PB_pbsv_17024:HG4_PB_pbsv_17248:HG2_PB_pbsv_17351:HG3_PB_HySA_26093:HG4_PB_SVrefine2PBcRDovetail_8668:HG4_PB_SVrefine2Falcon1Dovetail_10731:HG4_Ill_SVrefine2DISCOVARDovetail_12108:HG3_PB_SVrefine2PBcRDovetail_8419:HG3_PB_SVrefine2Falcon1Dovetail_10724:HG3_Ill_SVrefine2DISCOVARDovetail_12340:HG2_PB_assemblyticsfalcon_11508:HG2_PB_assemblyticsPBcR_11127:HG2_PB_SVrefine2PBcRplusDovetail_4728:HG2_PB_SVrefine2PB10Xhap12_12596:HG2_PB_SVrefine2Falcon2Bionano_8553:HG2_PB_SVrefine2Falcon1plusDovetail_5162:HG2_PB_PB10Xdip_14143:HG2_Ill_SVrefine2DISCOVARplusDovetail_5549:HG2_10X_SVrefine210Xhap12_12039:HG4_10X_allpass_3129:HG3_10X_allpass_3281:HG4_PB_assemblyticsfalcon_11309:HG3_PB_assemblyticsfalcon_11484:HG3_Ill_MetaSV_2269:HG2_Ill_SpiralSDKrefine_7277:HG4_Ill_MetaSV_2189:HG4_Ill_Krunchall_23511:HG3_Ill_Krunchall_22778:HG2_Ill_Krunchall_23184:HG2_10X_allpass_2664;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12039:HG2_Ill_SVrefine2DISCOVARplusDovetail_5549:HG2_PB_PB10Xdip_14143:HG2_PB_SVrefine2Falcon1plusDovetail_5162:HG2_PB_SVrefine2Falcon2Bionano_8553:HG2_PB_SVrefine2PB10Xhap12_12596:HG2_PB_SVrefine2PBcRplusDovetail_4728:HG2_PB_assemblyticsPBcR_11127:HG2_PB_assemblyticsfalcon_11508:HG3_Ill_SVrefine2DISCOVARDovetail_12340:HG3_PB_SVrefine2Falcon1Dovetail_10724:HG3_PB_SVrefine2PBcRDovetail_8419:HG4_Ill_SVrefine2DISCOVARDovetail_12108:HG4_PB_SVrefine2Falcon1Dovetail_10731:HG4_PB_SVrefine2PBcRDovetail_8668;NumExactMatchSVs=15;ClusterMaxShiftDist=0.127457;ClusterMaxSizeDiff=0.127457;ClusterMaxEditDist=0.127457;PBcalls=17;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-3549;DistBack=0;DistForward=-2157;DistMin=-2157;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:38864785-38868343;PctSeqSimilarity=0.9669;PctSizeSimilarity=0.9997;PctRecOverlap=0.9975;SizeDiff=-1;StartDistance=1;EndDistance=9;GTMatch=0;TruScore=98;MatchId=1607.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:71:1/1:3:24:0:13:1/1:0:19:0:27:1/1:0:41:1/1:2:275:3729:.:.
chr18	39143402	HG3_Ill_GATKHC_27276	GAACATCATTAGGAGTCAGCAAGAGAAGACACGGAATAAGGGGATTTCTGATGGAAGAAAGAAAAAAAAATGAAAGAAGA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2478:HG4_PB_pbsv_17252:HG4_PB_assemblyticsfalcon_11313:HG3_PB_assemblyticsfalcon_11488:HG4_Ill_Spiral_1342:HG2_PB_HySA_31552:HG4_PB_SVrefine2PBcRDovetail_8671:HG4_Ill_svaba_21314:HG4_Ill_scalpel_15745:HG4_Ill_manta_3940:HG4_Ill_SVrefine2DISCOVARDovetail_12112:HG4_Ill_Krunchall_23514:HG4_Ill_GATKHC_27354:HG4_Ill_GATKHCSBGrefine_11739:HG4_Ill_Cortex_1520:HG4_Ill_250bpfermikitraw_22493:HG4_Ill_150bpfermikitraw_21644:HG4_10X_allpass_3130:HG3_PB_pbsv_17028:HG3_PB_SVrefine2Falcon1Dovetail_10727:HG3_Ill_svaba_21580:HG3_Ill_scalpel_16502:HG3_Ill_manta_3800:HG3_Ill_SVrefine2DISCOVARDovetail_12345:HG3_Ill_Krunchall_22781:HG3_Ill_GATKHC_27276:HG3_Ill_GATKHCSBGrefine_11290:HG3_Ill_Cortex_1569:HG3_Ill_250bpfermikitraw_22206:HG3_Ill_150bpfermikitraw_21574:HG3_10X_allpass_3282:HG2_PB_pbsv_17354:HG2_PB_SVrefine2PBcRplusDovetail_4731:HG2_PB_SVrefine2PB10Xhap12_12599:HG2_PB_SVrefine2Falcon2Bionano_8556:HG2_PB_SVrefine2Falcon1plusDovetail_5165:HG2_Ill_svaba_21372:HG2_Ill_scalpel_16159:HG2_Ill_manta_4648:HG2_Ill_SpiralSDKrefine_7280:HG2_Ill_SVrefine2DISCOVARplusDovetail_5552:HG2_Ill_Krunchall_23187:HG2_Ill_GATKHC_27410:HG2_Ill_GATKHCSBGrefine_11380:HG2_Ill_Cortex_3689:HG2_Ill_250bpfermikitraw_22857:HG2_Ill_150bpfermikitraw_21552:HG2_CG_vcfBeta_9804:HG2_10X_allpass_2665:HG2_10X_SVrefine210Xhap12_12041:HG2_PB_assemblyticsfalcon_11512:HG2_PB_assemblyticsPBcR_11132:HG3_PB_HySA_26097;NumClusterSVs=53;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12041:HG2_10X_allpass_2665:HG2_CG_vcfBeta_9804:HG2_Ill_150bpfermikitraw_21552:HG2_Ill_250bpfermikitraw_22857:HG2_Ill_Cortex_3689:HG2_Ill_GATKHCSBGrefine_11380:HG2_Ill_GATKHC_27410:HG2_Ill_Krunchall_23187:HG2_Ill_SVrefine2DISCOVARplusDovetail_5552:HG2_Ill_SpiralSDKrefine_7280:HG2_Ill_manta_4648:HG2_Ill_scalpel_16159:HG2_Ill_svaba_21372:HG2_PB_SVrefine2Falcon1plusDovetail_5165:HG2_PB_SVrefine2Falcon2Bionano_8556:HG2_PB_SVrefine2PB10Xhap12_12599:HG2_PB_SVrefine2PBcRplusDovetail_4731:HG2_PB_pbsv_17354:HG3_10X_allpass_3282:HG3_Ill_150bpfermikitraw_21574:HG3_Ill_250bpfermikitraw_22206:HG3_Ill_Cortex_1569:HG3_Ill_GATKHCSBGrefine_11290:HG3_Ill_GATKHC_27276:HG3_Ill_Krunchall_22781:HG3_Ill_SVrefine2DISCOVARDovetail_12345:HG3_Ill_manta_3800:HG3_Ill_scalpel_16502:HG3_Ill_svaba_21580:HG3_PB_SVrefine2Falcon1Dovetail_10727:HG3_PB_pbsv_17028:HG4_10X_allpass_3130:HG4_Ill_150bpfermikitraw_21644:HG4_Ill_250bpfermikitraw_22493:HG4_Ill_Cortex_1520:HG4_Ill_GATKHCSBGrefine_11739:HG4_Ill_GATKHC_27354:HG4_Ill_Krunchall_23514:HG4_Ill_SVrefine2DISCOVARDovetail_12112:HG4_Ill_manta_3940:HG4_Ill_scalpel_15745:HG4_Ill_svaba_21314:HG4_PB_SVrefine2PBcRDovetail_8671;NumExactMatchSVs=44;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0379747;PBcalls=15;Illcalls=33;TenXcalls=4;CGcalls=1;PBexactcalls=8;Illexactcalls=31;TenXexactcalls=4;CGexactcalls=1;HG2count=23;HG3count=15;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-79;DistBack=70632;DistForward=-75;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=18:39143403-39143483;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1608.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:8:69:./.:8:12:0:25:1/1:0:19:0:15:1/1:0:53:./.:.:.:.:.:.
chr18	39589580	HG2_Ill_svaba_21374	CTACATTATGTAATGTACATTATGTAATGCTTACATTATGTAATGTACATTATGTAATGCT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5553:HG2_PB_HySA_31555:HG3_PB_HySA_26101:HG2_PB_pbsv_17356:HG3_PB_pbsv_17030:HG4_PB_assemblyticsfalcon_11316:HG3_Ill_svaba_21582:HG3_Ill_GATKHCSBGrefine_11291:HG3_Ill_250bpfermikitraw_22211:HG3_Ill_150bpfermikitraw_21578:HG2_Ill_svaba_21374:HG2_Ill_SpiralSDKrefine_7284:HG2_Ill_GATKHCSBGrefine_11381:HG2_Ill_250bpfermikitraw_22863:HG3_PB_SVrefine2PBcRDovetail_8424:HG3_PB_SVrefine2Falcon1Dovetail_10730:HG3_Ill_SVrefine2DISCOVARDovetail_12347:HG2_PB_SVrefine2PBcRplusDovetail_4733:HG2_PB_SVrefine2PB10Xhap12_12602:HG2_PB_SVrefine2Falcon2Bionano_8558;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22863:HG2_Ill_GATKHCSBGrefine_11381:HG2_Ill_SpiralSDKrefine_7284:HG2_Ill_svaba_21374:HG3_Ill_150bpfermikitraw_21578:HG3_Ill_250bpfermikitraw_22211:HG3_Ill_GATKHCSBGrefine_11291:HG3_Ill_svaba_21582;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.0983607;PBcalls=10;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-60;DistBack=57568;DistForward=-31;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=139;REFWIDENED=18:39589553-39589751;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1609.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:0|1:20:0:7:30:1|0:0:8:20:1:0/1:22:23:./.:.:.:.:.:.
chr18	41031544	HG2_PB_SVrefine2Falcon1plusDovetail_5169	TTAAAAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGTCTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGACATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCGGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATAAAAAAAAAAAAAAAATAAAAAATAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1135:HG2_PB_SVrefine2PB10Xhap12_12604:HG3_10X_allpass_3284:HG4_Ill_Krunchall_23525:HG3_Ill_Krunchall_22801:HG2_Ill_Krunchall_23202:HG4_PB_assemblyticsfalcon_11326:HG3_PB_assemblyticsfalcon_11505:HG2_PB_assemblyticsfalcon_11527:HG2_PB_assemblyticsPBcR_11148:HG2_10X_allpass_2666:HG4_PB_pbsv_17258:HG4_PB_SVrefine2PBcRDovetail_8674:HG4_PB_SVrefine2Falcon1Dovetail_10737:HG4_Ill_SVrefine2DISCOVARDovetail_12119:HG4_Ill_MetaSV_2190:HG4_Ill_GATKHCSBGrefine_11741:HG4_10X_allpass_3131:HG3_PB_pbsv_17034:HG3_PB_SVrefine2PBcRDovetail_8426:HG3_PB_SVrefine2Falcon1Dovetail_10732:HG3_Ill_SVrefine2DISCOVARDovetail_12351:HG3_Ill_MetaSV_2271:HG3_Ill_GATKHCSBGrefine_11296:HG2_PB_pbsv_17362:HG2_PB_SVrefine2PBcRplusDovetail_4735:HG2_PB_SVrefine2Falcon1plusDovetail_5169:HG2_Ill_manta_4649:HG2_Ill_breakscan11_2479:HG2_Ill_SVrefine2DISCOVARplusDovetail_5557:HG2_Ill_MetaSV_2128:HG2_10X_SVrefine210Xhap12_12046:HG3_Ill_Spiral_17701:HG2_Ill_tnscope_1844;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12046:HG2_Ill_MetaSV_2128:HG2_Ill_SVrefine2DISCOVARplusDovetail_5557:HG2_Ill_breakscan11_2479:HG2_Ill_manta_4649:HG2_PB_SVrefine2Falcon1plusDovetail_5169:HG2_PB_SVrefine2PBcRplusDovetail_4735:HG2_PB_pbsv_17362:HG3_Ill_GATKHCSBGrefine_11296:HG3_Ill_MetaSV_2271:HG3_Ill_SVrefine2DISCOVARDovetail_12351:HG3_PB_SVrefine2Falcon1Dovetail_10732:HG3_PB_SVrefine2PBcRDovetail_8426:HG3_PB_pbsv_17034:HG4_10X_allpass_3131:HG4_Ill_GATKHCSBGrefine_11741:HG4_Ill_MetaSV_2190:HG4_Ill_SVrefine2DISCOVARDovetail_12119:HG4_PB_SVrefine2Falcon1Dovetail_10737:HG4_PB_SVrefine2PBcRDovetail_8674:HG4_PB_pbsv_17258;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0213198;ClusterMaxSizeDiff=0.0213198;ClusterMaxEditDist=0.0213198;PBcalls=14;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-984;DistBack=53526;DistForward=-977;DistMin=-977;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=18:41031545-41032536;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1610.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:35:0|1:32:0:0:28:0|1:61:0:0:39:0/1:39:18:0/1:68:33:.:.:.
chr18	41381571	HG3_Ill_svaba_21593	AAAAAAAAAAGAAAGAAAGAAATAGGAAAGGTTAGTTAATCTTTCAGGAAG	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2480:HG2_PB_HySA_31571:HG2_PB_HySA_31570:HG4_Ill_svaba_21327:HG4_Ill_scalpel_15754:HG4_Ill_Krunchall_23533:HG4_Ill_GATKHC_27371:HG4_Ill_GATKHCSBGrefine_11745:HG4_Ill_250bpfermikitraw_22507:HG4_Ill_150bpfermikitraw_21660:HG4_CG_vcfBeta_10840:HG4_10X_allpass_3133:HG3_Ill_svaba_21593:HG3_Ill_scalpel_16513:HG3_Ill_Krunchall_22804:HG3_Ill_GATKHC_27298:HG3_Ill_GATKHCSBGrefine_11298:HG3_Ill_250bpfermikitraw_22229:HG3_Ill_150bpfermikitraw_21595:HG2_PB_assemblyticsPBcR_11151:HG2_Ill_svaba_21384:HG2_Ill_scalpel_16167:HG2_Ill_SpiralSDKrefine_7292:HG2_Ill_Krunchall_23204:HG2_Ill_GATKHC_27426:HG2_Ill_GATKHCSBGrefine_11386:HG2_Ill_FB_14717:HG2_Ill_250bpfermikitraw_22877:HG2_Ill_150bpfermikitraw_21567:HG2_CG_vcfBeta_9809:HG4_Ill_Spiral_1344:HG2_PB_assemblyticsfalcon_11530:HG2_Ill_Spiral_1136;NumClusterSVs=33;ExactMatchIDs=HG2_CG_vcfBeta_9809:HG2_Ill_150bpfermikitraw_21567:HG2_Ill_250bpfermikitraw_22877:HG2_Ill_FB_14717:HG2_Ill_GATKHCSBGrefine_11386:HG2_Ill_GATKHC_27426:HG2_Ill_Krunchall_23204:HG2_Ill_SpiralSDKrefine_7292:HG2_Ill_scalpel_16167:HG2_Ill_svaba_21384:HG2_PB_assemblyticsPBcR_11151:HG3_Ill_150bpfermikitraw_21595:HG3_Ill_250bpfermikitraw_22229:HG3_Ill_GATKHCSBGrefine_11298:HG3_Ill_GATKHC_27298:HG3_Ill_Krunchall_22804:HG3_Ill_scalpel_16513:HG3_Ill_svaba_21593:HG4_10X_allpass_3133:HG4_CG_vcfBeta_10840:HG4_Ill_150bpfermikitraw_21660:HG4_Ill_250bpfermikitraw_22507:HG4_Ill_GATKHCSBGrefine_11745:HG4_Ill_GATKHC_27371:HG4_Ill_Krunchall_23533:HG4_Ill_scalpel_15754:HG4_Ill_svaba_21327;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0392157;PBcalls=4;Illcalls=26;TenXcalls=1;CGcalls=2;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=1;CGexactcalls=2;HG2count=16;HG3count=7;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-50;DistBack=18280;DistForward=254;DistMin=254;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:41381570-41381622;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1611.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:0:6:0:9:1/1:0:20:0:9:1/1:0:32:./.:.:.:.:.:.
chr18	41886645	HG2_PB_SVrefine2PB10Xhap12_12608	AGCTGGGATTACAGGCATGTGCCACCATGCCCGGCTAATTTTGTATTTTTTAGTAGAGACGGGGTTTCTCCATGTTGGCCAGGCTAGTCTCAAACTCCCGACCTCAGGTGATCCGCCCGCCTCGGCCTCTCGAAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12049:HG4_PB_assemblyticsfalcon_11330:HG4_PB_pbsv_17264:HG4_PB_HySA_25230:HG3_PB_pbsv_17038:HG4_Ill_GATKHCSBGrefine_11747:HG4_PB_SVrefine2PBcRDovetail_8678:HG4_PB_SVrefine2Falcon1Dovetail_10740:HG4_Ill_SVrefine2DISCOVARDovetail_12123:HG2_PB_pbsv_17365:HG4_10X_allpass_3135:HG3_Ill_SVrefine2DISCOVARDovetail_12356:HG3_10X_allpass_3287:HG2_PB_SVrefine2PBcRplusDovetail_4738:HG2_PB_SVrefine2PB10Xhap12_12608:HG2_PB_SVrefine2Falcon2Bionano_8565:HG2_PB_SVrefine2Falcon1plusDovetail_5172:HG2_Ill_SVrefine2DISCOVARplusDovetail_5562;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12049:HG4_10X_allpass_3135:HG3_Ill_SVrefine2DISCOVARDovetail_12356:HG3_10X_allpass_3287:HG2_PB_SVrefine2PBcRplusDovetail_4738:HG2_PB_SVrefine2PB10Xhap12_12608:HG2_PB_SVrefine2Falcon2Bionano_8565:HG2_PB_SVrefine2Falcon1plusDovetail_5172:HG2_Ill_SVrefine2DISCOVARplusDovetail_5562;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0224719;ClusterMaxSizeDiff=0.0223048;ClusterMaxEditDist=0.0374532;PBcalls=11;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=3;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-135;DistBack=52614;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=160;REFWIDENED=18:41886646-41886940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1612.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:67:1/1:5:26:2:15:./.:0:2:0:2:1/1:0:29:./.:.:.:.:.:.
chr18	41976708	HG2_PB_assemblyticsfalcon_11535	CAACCTCCCTCTGCAGTTTGCAGCTTTTTCACACTGCTAGCTCTCACTGCCCCATCAGCAGGTGTGAAAGAAGAGTCAAGGGAAAAGAGTAGTTGCTTTCTGGCCCAAAATGATGACATAAAAGGAACTATACCAATGCCTTCACTTTATTGTTTTCACACAAACTTGACAGAGGATTCTTAAATATTGTTTTGCTTTCAGCATCAGCCTCCTAATAGGAGAAATGCCAGACTTGTTAGAAATAGAGTCTGATCCATTCTGTAGAAGAGTTAACAGTTTAGTTAAGATCCATGAAATCTGGATGCAGCCCATATGGAATTGTCACTGTTGCTTTCATTAAAGCTGGAATTACGCACATCAACATATGACTGCACCAATGTGGAATATTAGAAATCACCCTGGCATGTATCTTCCACAAGTGGCGAATCTGTCATACAGGGGCTACCTTGGTTCTGCCACTCACATGGTTAAAATTATCTAGCTTTGAAAGTTTATTTATTTGTAAAAATATGCAAATGTGTTCCTGCTTATTAAACCCATTAGGATTATGAGAATCAATTGTGAAGAAATGGACGTATTGCATATTAAATTTTAATTCCTATGTATGATCATGTTTTCTAAGACACATTTTTCAGAATAATCTCTTTTTTAAATATTAGCGATTATAGAGTTCTTAGGGTTGAATAATTCTCAGTAAACCTGCATGTATCTCTAGAATTATGTTTGTAAATATTTTTTTCTTAAAACACTTTCTCCAGATGTAAACTTCCTTAGTAGCCTAATCCTTAATTTCATTATATTTCTCTTTATAATTACTAGAACTTATTCTTCCTGCAATTCTACTCTCCTTTAGTAGAGCACTTTAATTTACTTTATTAGAATGGCTTAATAATTGTATTGTAGATCTAAAAGATAAAATTAATTATATATTTTAATTGATAATTTTATAGATTTCACTGAAATTTGTGAAGAATTCTGAAAGGACGTTATAATTATCACTTTGTACATTTCTATTTGCAAGTCAGATACATCTGAATGAGCACTGATATCTTGGCTGTATTGTTTGAAAAATTAATCTGCAAATGAGAGTTTATCCCCCTCTTCAATTAGATTTCAAAACTAATCTATCAAAATAACTAAATAGAAAATTATTTTTGCACAAGGAAACTTCAGATTGAAATGTGTGACTAGTGCAATTAATTCTCTTTCTCATTTAATTTTGAAACATTTATGATCTGTATTTAATGTAACTTTGGTTTTTGTTCCCAGACTCCAAACAGCCCAGGAGAGTTTCATATGAGTTATAAAGTTCCACCCCCACCCCATTTCTCTAAAGTTAATAGACCCACATGTTAATACACCCTCAGGGATACATTTGCATCATTTTCCAGTCATCTGTGACTGTAAACTTTCTTTTTTAATTTTTAATTTTTGTTGGTACGTAGTAGGTGTATATGTTTATGAGGTACATGAGCTACTTTGAAACAGACATGCAATACGTAATAATCACATCATGGTAAGTGGGGAATTCATCCCTTCAAGTACTTACCCTTTGTGTTGCACACAATATAATTATATTATTCTAGTTATTTTTAAATGTATGATTAAATTATTATTGGTTATAGTTGCCCTGTTGTGCTATCAAATACGAGGTCTTATTTCTAACTTTTAAATTCAATATTATCCAGTGTTACCAGAAAGAATTAAAAGAGTATTTGAAATTATTTAAATGACCTTACTAAACCATCAATTTTGAACATATGTCTCCATGCTATTTAATCAAGGATGATGATGATGATGATGATGATATTTGCCTCCCATTAGATGCAGTAGGTGATACGAATCAACTATAGAGCTCAGTCCATGTTTTTCAAAACTTTAGTGTCCACTTTAGTGCTCAAAATATTTCATGTTATTCAGAGTGAAGTGAGTAAATAAGCCTTCAAGGTTCTTCTCATATAAGAAACTAAACTTAAGGTTGTTACATATTTACCCTTACAGACCATAATCATCCCATGACAAGGTGTAAAAAAACCCCCAGGATTTGTCCTCTTTATCTCTAACCACCTCTTTTTCTATTCTATGCCTTGACACTCTATTCCAACATATCACACTCAATAATTCCATGTGAGTGATGGAATTGTGAGTGATCAATTTCAGTTGATCAATTTCAGGGATACTCTGAAATTGATATCTCATATAACATCTGTTTGTTTGCACTCCTGGAAACACTCTTTTAAGGTATTACTGAGTTTATTAGATGTTGCAGAATAAGAAATAGTATGAAAACATCTTCTGAAGTTCAGAAAAAGAATCCCTGAGAAACAACTTCCATAATGAAATACAAAATCCAGAAACAGAGGATGTGGTTAGTCTATTTTAAAAAAATGTGAGGCTGTTTGCATAACTGAAAACCTTCATCAATTCTGCTTGTAAGCAGGTGATTTCCTATGTAGTATTACCGAAAAGGCTTCAGGAGGTGACATGTAAAAACACAGCCTTCCCAAGTTTCATGAAGTTAAAATTTTATTGTGACAATGTTATTATTTAAGTATTTAAATACAAAAGCCCCTAGGGGGAAAAGTAACACTTTATGTAGTTATCTGTGACCATCATAAAGTGATCTTATGATACCTTATAATTTTGAAATTATATAAATATATTATTATACCTTAGTTAAAAGTATCTGAGAAGTGTTGATTATAGAAATAGAATCTGGGGCTTCTTGGTTCCCAAGACACATTTAATGAACAGATACAGAAATAACGTAAAAACAGAGGACTCAAACCAAAACAGTTTTATCAGCTTCACATTTTACCTGAAGCTGGCACTTCCCCAATACACTGAAGAATTCTTGTACCAGAAATCTCAGAAATAAGTCCATAGTGTATTAGAAAAAGAAAAAGAGAAATTTAGCTTCCAAACTTTGATGTTGATTTCAGAGATCTGTAAAGACTACTGTAAATTTAAACACAAGATCGTTTTTTAAAAAAATATCAGGGAAAACTAGTTTAGATAATTACTATAGTCAGTTTTGGAGCCGGGAAAATTGATGCCAAATAACACAAGCACAAACACAAACCAGAAATTTAAAAATGCCTCAAGCTTATTCCCTTAGAATACAATACTGCTCCTCATCCCTCATCACCAGTGTTGTTTCTGACCTCAGTTCAATTTAGCAGTGAGGGTGATTCTTCTGATCTCTGAAGAATTACCCTGAACTCCACCAGACCTCACTGGCATCCCTTAAACCAGCTTTATTTCCACTAGCTCATTAGACATCTATCAACTGTGAACTTCAGTTAGTCATTGGTTCTTCAGAGATGGAATTCCAGCCTCTCCTTTATCCCTGCCTTATCCCTGACCTACCAATCAAGAATAGGCAATTAAATGACATTTACACCCCTTTTTTTTTTTCTGAGAGGGAGTTTCACTCTTGTTGCCTAGGCTAGAGTGTGATGGTGCAATCTTGGCTCACTGCAACCTCTGCCTGCTGGGTTCAACGGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTATAGGCATGAGCTACCAAGCCGGCTAATTTTTTATTTTTAGTAAAGATGGGGTTTCTCCATGTTGCTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCAACCCACCTGAGCCTCCTAAAGTGCTGAGATTACAGGTGTGAGCCACCGCAACTGGCCCATTTACACCCTCTTGTAAAAATAAAAAGAATTTTCAGTATAATGAATTTTCTCTCAGTATTCATTATATTTATCGACTGAAAGATAGTAATGGGGTCATTTATTAGGCATTGCATAGTGTCTACTGCTGTAATCTGCATAAGTGACTATTGCAGAATTTTCTGCAGCAATTTTTTAAAGCCTAAACAAATAAAATGAAGAGAAATGCTCAGAGCAGGTGGGTGTTTAATAGTGACTTATTCCTCTGGTGATACAGATTCTATGGGTGCCTAAATGGACACAGTGGTTTCATCCACAAGTGAGATTATTATGAAACTGCTATCATTCTGTCATGAATAATTGATCCTCTCACTGTTCAGGGGGGAAAAACAACAGATGTGATAAACAATGCAACAAATGTGACAAGGAGCTTAAAGTTTATTATTTTACTGCCTGTTATTTCAACATTTGTGAAGATGCCATAGGCAAAATCACCCAATCCCTGCATGAATGTGTAAACTGCATGACACACAAAAGATTATAATTAAGTAATTTAACCCTAACTATCCAACGACCCTTCTGGGTTTTGTGGAAAAGCCCATTTCTAAGAGAACGCACAGAGCAGTGATGACTCTTTCTAGAACTGTGTAGTTAACAGAGTTTCTTTTTAGTTCTTCTTCCCTTTCATATCAATTGTCTTCTCACAGTTGACATCCTGTGTGCTCCAAGAGTCCAGACACCTGTGGAACCCATTGATCAGTCCAACTCAAGACCCTAATTACAAGGGTTCTACCCAGACATTCTCCTCAAGCTAAGCAGTATACTCAACACTTACCCGTCTTTCTTTCTACCAATCAAAGTCTTATTCTACTTCCTTGCCCTACTGTGCCAGCTTTTAGGAGGAAAGTAATCTGATTAAAATAAACTATATTAAATCCTATAATGAGAGCTCATAACTTTCTACTGATCTAGCTAATTGAAATCAGTATATTTTTAGAAAATAAACTTGAAATATGACCAAGATTTTGACAACTTCTTATATAGTCCACTTAACCTGCCAATTTCTGATGTCTTTTGAAAATCATAGCATACATCAGAAAAAATAGGATTCATGACCATTGAAGTTCTAGGTAAGAATCTTTAAAGATATATAAGCCTAAATAGTTTGTCATTATTTCTATAAATACAGATGGATAAAGAAATAAATTATGAAAGAAGATAATACAATATTAAAAGCTGTATTTTCTAGAGCTCCTGGAAAGATGGAATTTTTCTTAAAAGAAAGATTCAGGGAGTAATGAAAAGAAGTCTTCCCAAAGTTTTGAATATGTAATTCAACAGGAAACAGAAAAATTTTTTGTAAATAACATTCTAAAAATAGGTGTTAAATAAAAAGTATCTATAGCAGAAAGAAGAAAAATAAAGGGGATTTGGTTACAAGAGGAGGAAAAAGAAAAGAAAGAAAGGAGAATTCTCAGTAGATGTCTGATAAGGCATGACCCACTTAAATAGAACAAATCCACTCATAAAATGGACTCTAGGAACATTCTAAATCCCAGTTATGAGAAGTAGGTCCATTTTCTAGAATCACATGATACAATTTTCATAGTATTTAATTGTTAACCAATATTTATGTGGTATCTACAACATGTGAAGCATTCTTTTTGATACTAAATCTAGAAAAAACA	G	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2273:HG3_PB_assemblyticsfalcon_11510:HG3_PB_SVrefine2PBcRDovetail_8429:HG3_PB_SVrefine2Falcon1Dovetail_10736:HG2_PB_assemblyticsfalcon_11535:HG2_PB_assemblyticsPBcR_11157:HG2_PB_SVrefine2PBcRplusDovetail_4740:HG2_PB_SVrefine2PB10Xhap12_12610:HG2_PB_SVrefine2Falcon1plusDovetail_5174:HG2_PB_PB10Xdip_14151:HG2_10X_SVrefine210Xhap12_12050:HG3_PB_pbsv_17040:HG2_PB_pbsv_17367:HG2_Ill_SpiralSDKrefine_7296:HG3_10X_allpass_3288:HG2_Ill_tnscope_1846:HG2_Ill_MetaSV_2130:HG2_10X_allpass_2668:HG2_Ill_breakscan11_2481:HG2_Ill_Krunchall_23209;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12050:HG2_PB_PB10Xdip_14151:HG2_PB_SVrefine2Falcon1plusDovetail_5174:HG2_PB_SVrefine2PB10Xhap12_12610:HG2_PB_SVrefine2PBcRplusDovetail_4740:HG2_PB_assemblyticsPBcR_11157:HG2_PB_assemblyticsfalcon_11535:HG3_PB_SVrefine2Falcon1Dovetail_10736:HG3_PB_SVrefine2PBcRDovetail_8429:HG3_PB_assemblyticsfalcon_11510;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00111815;ClusterMaxSizeDiff=0.00111815;ClusterMaxEditDist=0.00111815;PBcalls=11;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-5366;DistBack=-1;DistForward=4850;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:41976708-41982074;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9998;PctRecOverlap=0.9998;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1614.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:54:61:./.:20:26:20:4:1|0:2:49:60:0:0/1:58:12:0/1:330:187:5509:.:.
chr18	43261003	HG4_Ill_SVrefine2DISCOVARDovetail_12131	TCTGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCATTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12053:HG3_PB_HySA_26124:HG4_PB_assemblyticsfalcon_11342:HG3_PB_assemblyticsfalcon_11521:HG2_PB_assemblyticsfalcon_11544:HG2_PB_assemblyticsPBcR_11165:HG4_Ill_Krunchall_23547:HG3_Ill_Krunchall_22819:HG2_Ill_Krunchall_23218:HG4_PB_HySA_25245:HG4_Ill_Spiral_1345:HG2_PB_HySA_31584:HG4_Ill_MetaSV_2194:HG3_Ill_MetaSV_2275:HG2_Ill_tnscope_1848:HG2_Ill_MetaSV_2131:HG4_PB_pbsv_17269:HG4_PB_SVrefine2PBcRDovetail_8682:HG4_PB_SVrefine2Falcon1Dovetail_10745:HG4_Ill_manta_3944:HG4_Ill_SVrefine2DISCOVARDovetail_12131:HG4_Ill_GATKHCSBGrefine_11755:HG4_10X_allpass_3136:HG3_PB_pbsv_17044:HG3_PB_SVrefine2PBcRDovetail_8431:HG3_PB_SVrefine2Falcon1Dovetail_10739:HG3_Ill_scalpel_16529:HG3_Ill_manta_3805:HG3_Ill_SVrefine2DISCOVARDovetail_12365:HG3_Ill_GATKHCSBGrefine_11308:HG3_10X_allpass_3291:HG2_PB_pbsv_17373:HG2_PB_SVrefine2PBcRplusDovetail_4743:HG2_PB_SVrefine2PB10Xhap12_12615:HG2_PB_SVrefine2Falcon2Bionano_8569:HG2_PB_SVrefine2Falcon1plusDovetail_5177:HG2_Ill_scalpel_16180:HG2_Ill_manta_4652:HG2_Ill_breakscan11_2482:HG2_Ill_SVrefine2DISCOVARplusDovetail_5568:HG2_Ill_GATKHCSBGrefine_11393:HG2_10X_allpass_2669;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12053:HG4_PB_pbsv_17269:HG4_PB_SVrefine2PBcRDovetail_8682:HG4_PB_SVrefine2Falcon1Dovetail_10745:HG4_Ill_manta_3944:HG4_Ill_SVrefine2DISCOVARDovetail_12131:HG4_Ill_GATKHCSBGrefine_11755:HG4_10X_allpass_3136:HG3_PB_pbsv_17044:HG3_PB_SVrefine2PBcRDovetail_8431:HG3_PB_SVrefine2Falcon1Dovetail_10739:HG3_Ill_scalpel_16529:HG3_Ill_manta_3805:HG3_Ill_SVrefine2DISCOVARDovetail_12365:HG3_Ill_GATKHCSBGrefine_11308:HG3_10X_allpass_3291:HG2_PB_pbsv_17373:HG2_PB_SVrefine2PBcRplusDovetail_4743:HG2_PB_SVrefine2PB10Xhap12_12615:HG2_PB_SVrefine2Falcon2Bionano_8569:HG2_PB_SVrefine2Falcon1plusDovetail_5177:HG2_Ill_scalpel_16180:HG2_Ill_manta_4652:HG2_Ill_breakscan11_2482:HG2_Ill_SVrefine2DISCOVARplusDovetail_5568:HG2_Ill_GATKHCSBGrefine_11393:HG2_10X_allpass_2669;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0654206;ClusterMaxSizeDiff=0.0654206;ClusterMaxEditDist=0.0654206;PBcalls=18;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=23514;DistForward=22233;DistMin=22233;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=11;REFWIDENED=18:43261004-43261339;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1615.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:73:1/1:0:23:0:42:1/1:0:22:0:21:1/1:0:33:0/1:2:13:.:.:.
chr18	43345201	HG3_Ill_Krunchall_22821	TATTTTCAGTAGAGATGGGGTTTCACCATATTGGCCAGGCTGGTCTCAAACTCCTGACCTCGGGTGACCTGCCCACCTCAC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_17045:HG3_PB_HySA_26126:HG2_PB_HySA_31585:HG4_PB_pbsv_17270:HG4_PB_assemblyticsfalcon_11344:HG4_Ill_svaba_21342:HG4_Ill_scalpel_15767:HG4_Ill_manta_3945:HG4_Ill_Krunchall_23550:HG4_Ill_GATKHC_27388:HG4_Ill_GATKHCSBGrefine_11756:HG4_Ill_250bpfermikitraw_22524:HG4_Ill_150bpfermikitraw_21676:HG4_CG_vcfBeta_10843:HG4_10X_allpass_3137:HG3_PB_assemblyticsfalcon_11522:HG3_Ill_svaba_21609:HG3_Ill_scalpel_16530:HG3_Ill_manta_3806:HG3_Ill_Krunchall_22821:HG3_Ill_GATKHC_27317:HG3_Ill_GATKHCSBGrefine_11309:HG3_Ill_250bpfermikitraw_22245:HG3_Ill_150bpfermikitraw_21612:HG3_CG_vcfBeta_9297:HG3_10X_allpass_3292:HG2_PB_pbsv_17374:HG2_PB_assemblyticsfalcon_11545:HG2_PB_assemblyticsPBcR_11166:HG2_Ill_svaba_21400:HG2_Ill_scalpel_16181:HG2_Ill_manta_4653:HG2_Ill_Krunchall_23221:HG2_Ill_GATKHC_27445:HG2_Ill_GATKHCSBGrefine_11394:HG2_Ill_250bpfermikitraw_22888:HG2_Ill_150bpfermikitraw_21580:HG2_CG_vcfBeta_9815:HG2_10X_allpass_2670:HG2_Ill_breakscan11_2483;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_2670:HG2_CG_vcfBeta_9815:HG2_Ill_150bpfermikitraw_21580:HG2_Ill_250bpfermikitraw_22888:HG2_Ill_GATKHCSBGrefine_11394:HG2_Ill_GATKHC_27445:HG2_Ill_Krunchall_23221:HG2_Ill_manta_4653:HG2_Ill_scalpel_16181:HG2_Ill_svaba_21400:HG2_PB_assemblyticsPBcR_11166:HG2_PB_assemblyticsfalcon_11545:HG2_PB_pbsv_17374:HG3_10X_allpass_3292:HG3_CG_vcfBeta_9297:HG3_Ill_150bpfermikitraw_21612:HG3_Ill_250bpfermikitraw_22245:HG3_Ill_GATKHCSBGrefine_11309:HG3_Ill_GATKHC_27317:HG3_Ill_Krunchall_22821:HG3_Ill_manta_3806:HG3_Ill_scalpel_16530:HG3_Ill_svaba_21609:HG3_PB_assemblyticsfalcon_11522:HG4_10X_allpass_3137:HG4_CG_vcfBeta_10843:HG4_Ill_150bpfermikitraw_21676:HG4_Ill_250bpfermikitraw_22524:HG4_Ill_GATKHCSBGrefine_11756:HG4_Ill_GATKHC_27388:HG4_Ill_Krunchall_23550:HG4_Ill_manta_3945:HG4_Ill_scalpel_15767:HG4_Ill_svaba_21342:HG4_PB_assemblyticsfalcon_11344:HG4_PB_pbsv_17270;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0246914;ClusterMaxSizeDiff=0.0246914;ClusterMaxEditDist=0.037037;PBcalls=9;Illcalls=25;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=3;HG2count=15;HG3count=13;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-80;DistBack=86;DistForward=22717;DistMin=86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:43345200-43345282;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1616.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:0:21:1:9:1/1:0:13:0:12:1/1:0:42:./.:.:.:.:.:.
chr18	43750679	HG2_PB_SVrefine2PBcRplusDovetail_4744	GCCAGGTTGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGTGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG4_PB_HySA_25247:HG2_PB_assemblyticsPBcR_11168:HG2_PB_assemblyticsfalcon_11546:HG4_Ill_Krunchall_23551:HG4_PB_pbsv_17273:HG2_PB_HySA_31586:HG4_Ill_MetaSV_2195:HG2_Ill_tnscope_1849:HG2_Ill_MetaSV_2132:HG4_PB_SVrefine2PBcRDovetail_8684:HG4_Ill_scalpel_15768:HG4_Ill_SVrefine2DISCOVARDovetail_12134:HG4_Ill_GATKHCSBGrefine_11757:HG4_10X_allpass_3138:HG2_PB_pbsv_17375:HG2_PB_SVrefine2PBcRplusDovetail_4744:HG2_PB_SVrefine2Falcon1plusDovetail_5178:HG2_Ill_manta_4654:HG2_Ill_GATKHCSBGrefine_11395:HG2_10X_allpass_2671:HG2_10X_SVrefine210Xhap12_12057;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12057:HG2_10X_allpass_2671:HG2_Ill_GATKHCSBGrefine_11395:HG2_Ill_manta_4654:HG2_PB_SVrefine2Falcon1plusDovetail_5178:HG2_PB_SVrefine2PBcRplusDovetail_4744:HG2_PB_pbsv_17375:HG4_10X_allpass_3138:HG4_Ill_GATKHCSBGrefine_11757:HG4_Ill_SVrefine2DISCOVARDovetail_12134:HG4_Ill_scalpel_15768:HG4_PB_SVrefine2PBcRDovetail_8684;NumExactMatchSVs=12;ClusterMaxShiftDist=0.162003;ClusterMaxSizeDiff=0.162003;ClusterMaxEditDist=0.162003;PBcalls=9;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=-330;DistForward=-287;DistMin=-330;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=18:43750680-43751021;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1617.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:20:0|1:30:2:0:15:0|1:38:0:0:14:0/1:17:9:0/1:25:10:.:.:.
chr18	44338417	HG2_Ill_manta_4655	TCACAGGTAGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_PB_HySA_31594:HG3_10X_allpass_3294:HG2_10X_allpass_2672:HG2_PB_PB10Xdip_14156:HG2_PB_SVrefine2PB10Xhap12_12618:HG3_PB_assemblyticsfalcon_11530:HG2_PB_assemblyticsPBcR_11172:HG4_PB_assemblyticsfalcon_11349:HG3_Ill_Krunchall_22830:HG2_Ill_Krunchall_23230:HG4_Ill_Spiral_1346:HG2_Ill_Spiral_1137:HG2_PB_pbsv_17376:HG2_Ill_breakscan11_2484:HG4_Ill_MetaSV_2196:HG3_Ill_MetaSV_2277:HG2_Ill_MetaSV_2133:HG4_PB_SVrefine2PBcRDovetail_8685:HG4_PB_SVrefine2Falcon1Dovetail_10747:HG4_Ill_scalpel_15771:HG4_Ill_manta_3946:HG4_Ill_GATKHCSBGrefine_11758:HG4_10X_allpass_3139:HG3_PB_pbsv_17046:HG3_PB_SVrefine2Falcon1Dovetail_10742:HG3_Ill_scalpel_16536:HG3_Ill_manta_3807:HG3_Ill_GATKHCSBGrefine_11310:HG2_PB_SVrefine2PBcRplusDovetail_4745:HG2_PB_SVrefine2PB10Xhap12_12617:HG2_PB_SVrefine2Falcon2Bionano_8570:HG2_PB_SVrefine2Falcon1plusDovetail_5179:HG2_Ill_scalpel_16186:HG2_Ill_manta_4655:HG2_Ill_SpiralSDKrefine_7307:HG2_Ill_GATKHCSBGrefine_11396:HG2_10X_SVrefine210Xhap12_12058:HG2_Ill_tnscope_1850:HG4_PB_pbsv_17274;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12058:HG2_Ill_GATKHCSBGrefine_11396:HG2_Ill_SpiralSDKrefine_7307:HG2_Ill_manta_4655:HG2_Ill_scalpel_16186:HG2_PB_SVrefine2Falcon1plusDovetail_5179:HG2_PB_SVrefine2Falcon2Bionano_8570:HG2_PB_SVrefine2PB10Xhap12_12617:HG2_PB_SVrefine2PBcRplusDovetail_4745:HG3_Ill_GATKHCSBGrefine_11310:HG3_Ill_manta_3807:HG3_Ill_scalpel_16536:HG3_PB_SVrefine2Falcon1Dovetail_10742:HG3_PB_pbsv_17046:HG4_10X_allpass_3139:HG4_Ill_GATKHCSBGrefine_11758:HG4_Ill_manta_3946:HG4_Ill_scalpel_15771:HG4_PB_SVrefine2Falcon1Dovetail_10747:HG4_PB_SVrefine2PBcRDovetail_8685;NumExactMatchSVs=20;ClusterMaxShiftDist=0.127786;ClusterMaxSizeDiff=0.127786;ClusterMaxEditDist=0.127786;PBcalls=16;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=20;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-337;DistBack=29059;DistForward=41893;DistMin=29059;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=18:44338418-44338770;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1618.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:33:0|1:24:0:0:30:1|0:0:24:39:0:0/1:31:21:./.:29:3:.:.:.
chr18	44382709	HG2_10X_SVrefine210Xhap12_12059	TAAGAAAGCCAAAGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1138:HG4_PB_assemblyticsfalcon_11350:HG2_Ill_Krunchall_23231:HG2_PB_assemblyticsPBcR_11173:HG3_Ill_Spiral_17725:HG2_PB_SVrefine2PB10Xhap12_12620:HG2_PB_PB10Xdip_14158:HG2_PB_PB10Xdip_14157:HG2_PB_pbsv_17377:HG3_Ill_MetaSV_2279:HG2_Ill_tnscope_1851:HG4_PB_SVrefine2Falcon1Dovetail_10748:HG3_PB_pbsv_17047:HG3_Ill_manta_3808:HG3_Ill_SVrefine2DISCOVARDovetail_12369:HG3_Ill_GATKHCSBGrefine_11311:HG3_10X_allpass_3295:HG2_PB_SVrefine2PBcRplusDovetail_4746:HG2_PB_SVrefine2PB10Xhap12_12619:HG2_PB_SVrefine2Falcon2Bionano_8571:HG2_Ill_manta_4656:HG2_Ill_breakscan11_2485:HG2_Ill_SVrefine2DISCOVARplusDovetail_5573:HG2_Ill_MetaSV_2134:HG2_Ill_GATKHCSBGrefine_11397:HG2_10X_allpass_2673:HG2_10X_SVrefine210Xhap12_12059;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12059:HG2_10X_allpass_2673:HG2_Ill_GATKHCSBGrefine_11397:HG2_Ill_MetaSV_2134:HG2_Ill_SVrefine2DISCOVARplusDovetail_5573:HG2_Ill_breakscan11_2485:HG2_Ill_manta_4656:HG2_PB_PB10Xdip_14157:HG4_PB_SVrefine2Falcon1Dovetail_10748:HG3_PB_pbsv_17047:HG3_Ill_manta_3808:HG3_Ill_SVrefine2DISCOVARDovetail_12369:HG3_Ill_GATKHCSBGrefine_11311:HG3_10X_allpass_3295:HG2_PB_SVrefine2PBcRplusDovetail_4746:HG2_PB_SVrefine2PB10Xhap12_12619:HG2_PB_SVrefine2Falcon2Bionano_8571;NumExactMatchSVs=17;ClusterMaxShiftDist=0.119488;ClusterMaxSizeDiff=0.119488;ClusterMaxEditDist=0.119658;PBcalls=11;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-350;DistBack=-351;DistForward=-339;DistMin=-351;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=18:44382710-44383073;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1619.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:32:39:0|1:27:3:1:27:1|0:1:27:29:0:0/1:22:19:0/0:22:2:.:.:.
chr18	44715166	HG2_Ill_SpiralSDKrefine_7310	TGAAATTTCAAAGCATCTTATTAAAGAGAAGATGCTGAAAGCTTCAAAGGGGGAAAAATGTTATCTATAAAGAAATAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_26140:HG3_PB_assemblyticsfalcon_11533:HG4_PB_pbsv_17276:HG4_Ill_svaba_21346:HG4_Ill_manta_3947:HG4_Ill_SVrefine2DISCOVARDovetail_12136:HG4_Ill_Krunchall_23557:HG4_Ill_GATKHC_27396:HG4_Ill_GATKHCSBGrefine_11759:HG4_Ill_Cortex_1523:HG4_Ill_250bpfermikitraw_22529:HG4_Ill_150bpfermikitraw_21681:HG4_CG_vcfBeta_10849:HG4_10X_allpass_3140:HG3_PB_pbsv_17050:HG3_Ill_svaba_21620:HG3_Ill_manta_3809:HG3_Ill_SVrefine2DISCOVARDovetail_12372:HG3_Ill_Krunchall_22833:HG3_Ill_GATKHC_27330:HG3_Ill_GATKHCSBGrefine_11312:HG3_Ill_Cortex_1575:HG3_Ill_250bpfermikitraw_22254:HG3_Ill_150bpfermikitraw_21622:HG3_CG_vcfBeta_9304:HG3_10X_allpass_3296:HG2_PB_pbsv_17379:HG2_PB_SVrefine2Falcon2Bionano_8572:HG2_Ill_svaba_21410:HG2_Ill_manta_4657:HG2_Ill_breakscan11_2486:HG2_Ill_SpiralSDKrefine_7310:HG2_Ill_SVrefine2DISCOVARplusDovetail_5575:HG2_Ill_Krunchall_23233:HG2_Ill_GATKHC_27456:HG2_Ill_GATKHCSBGrefine_11398:HG2_Ill_Cortex_3700:HG2_Ill_250bpfermikitraw_22897:HG2_Ill_150bpfermikitraw_21591:HG2_CG_vcfBeta_9822:HG2_10X_allpass_2674:HG2_10X_SVrefine210Xhap12_12062;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12062:HG2_10X_allpass_2674:HG2_CG_vcfBeta_9822:HG2_Ill_150bpfermikitraw_21591:HG2_Ill_250bpfermikitraw_22897:HG2_Ill_Cortex_3700:HG2_Ill_GATKHCSBGrefine_11398:HG2_Ill_GATKHC_27456:HG2_Ill_Krunchall_23233:HG2_Ill_SVrefine2DISCOVARplusDovetail_5575:HG2_Ill_SpiralSDKrefine_7310:HG2_Ill_breakscan11_2486:HG2_Ill_manta_4657:HG2_Ill_svaba_21410:HG2_PB_SVrefine2Falcon2Bionano_8572:HG2_PB_pbsv_17379:HG3_10X_allpass_3296:HG3_CG_vcfBeta_9304:HG3_Ill_150bpfermikitraw_21622:HG3_Ill_250bpfermikitraw_22254:HG3_Ill_Cortex_1575:HG3_Ill_GATKHCSBGrefine_11312:HG3_Ill_GATKHC_27330:HG3_Ill_Krunchall_22833:HG3_Ill_SVrefine2DISCOVARDovetail_12372:HG3_Ill_manta_3809:HG3_Ill_svaba_21620:HG3_PB_pbsv_17050:HG4_10X_allpass_3140:HG4_CG_vcfBeta_10849:HG4_Ill_150bpfermikitraw_21681:HG4_Ill_250bpfermikitraw_22529:HG4_Ill_Cortex_1523:HG4_Ill_GATKHCSBGrefine_11759:HG4_Ill_GATKHC_27396:HG4_Ill_Krunchall_23557:HG4_Ill_SVrefine2DISCOVARDovetail_12136:HG4_Ill_manta_3947:HG4_Ill_svaba_21346:HG4_PB_pbsv_17276;NumExactMatchSVs=40;ClusterMaxShiftDist=0.025974;ClusterMaxSizeDiff=0.025974;ClusterMaxEditDist=0.155844;PBcalls=6;Illcalls=29;TenXcalls=4;CGcalls=3;PBexactcalls=4;Illexactcalls=29;TenXexactcalls=4;CGexactcalls=3;HG2count=16;HG3count=14;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-77;DistBack=9734;DistForward=-61;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=18:44715167-44715248;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1620.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:23:1|0:3:23:30:0:0|1:41:0:0:14:0/1:43:36:./.:.:.:.:.:.
chr18	45099894	HG2_10X_allpass_2675	TAAAAAGTAGCTGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_25259:HG2_PB_SVrefine2PB10Xhap12_12625:HG2_PB_PB10Xdip_14176:HG4_Ill_Krunchall_23562:HG2_Ill_Krunchall_23237:HG2_PB_assemblyticsPBcR_11183:HG4_PB_SVrefine2Falcon1Dovetail_10750:HG4_PB_assemblyticsfalcon_11360:HG2_PB_pbsv_17381:HG4_Ill_MetaSV_2197:HG2_Ill_tnscope_1852:HG2_Ill_MetaSV_2135:HG4_PB_pbsv_17278:HG4_Ill_manta_3948:HG4_Ill_SVrefine2DISCOVARDovetail_12140:HG4_Ill_GATKHCSBGrefine_11760:HG4_10X_allpass_3141:HG3_PB_assemblyticsfalcon_11542:HG3_PB_SVrefine2Falcon1Dovetail_10744:HG2_PB_SVrefine2PBcRplusDovetail_4749:HG2_PB_SVrefine2PB10Xhap12_12624:HG2_PB_SVrefine2Falcon2Bionano_8574:HG2_Ill_GATKHCSBGrefine_11399:HG2_10X_allpass_2675:HG2_Ill_breakscan11_2488;NumClusterSVs=25;ExactMatchIDs=HG2_10X_allpass_2675:HG2_Ill_GATKHCSBGrefine_11399:HG2_PB_SVrefine2Falcon2Bionano_8574:HG2_PB_SVrefine2PB10Xhap12_12624:HG2_PB_SVrefine2PBcRplusDovetail_4749:HG3_PB_SVrefine2Falcon1Dovetail_10744:HG3_PB_assemblyticsfalcon_11542:HG4_10X_allpass_3141:HG4_Ill_GATKHCSBGrefine_11760:HG4_Ill_SVrefine2DISCOVARDovetail_12140:HG4_Ill_manta_3948:HG4_PB_pbsv_17278;NumExactMatchSVs=12;ClusterMaxShiftDist=0.143345;ClusterMaxSizeDiff=0.143345;ClusterMaxEditDist=0.181507;PBcalls=13;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=-135;DistForward=-303;DistMin=-303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=18:45099895-45100220;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1621.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:0|1:31:0:0:21:0|1:41:0:0:16:0/1:32:30:0/1:25:5:.:.:.
chr18	45996143	HG4_PB_SVrefine2Falcon1Dovetail_10755	TAGAAAATAGGTATCATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2489:HG3_PB_pbsv_17056:HG2_PB_assemblyticsfalcon_11561:HG2_PB_assemblyticsPBcR_11193:HG4_PB_assemblyticsfalcon_11372:HG3_PB_assemblyticsfalcon_11553:HG4_Ill_Krunchall_23571:HG3_Ill_Krunchall_22844:HG2_Ill_Krunchall_23247:HG4_Ill_Spiral_1348:HG3_Ill_Spiral_17738:HG2_Ill_Spiral_1140:HG4_PB_pbsv_17284:HG2_PB_pbsv_17386:HG3_PB_HySA_26162:HG4_PB_HySA_25273:HG2_PB_HySA_31618:HG4_Ill_MetaSV_2201:HG3_Ill_MetaSV_2283:HG2_Ill_tnscope_1853:HG2_Ill_MetaSV_2137:HG4_PB_SVrefine2PBcRDovetail_8691:HG4_PB_SVrefine2Falcon1Dovetail_10755:HG4_Ill_svaba_21367:HG4_Ill_scalpel_15793:HG4_Ill_manta_3950:HG4_Ill_SVrefine2DISCOVARDovetail_12144:HG4_Ill_GATKHCSBGrefine_11763:HG4_10X_allpass_3143:HG3_PB_SVrefine2PBcRDovetail_8437:HG3_PB_SVrefine2Falcon1Dovetail_10746:HG3_Ill_svaba_21634:HG3_Ill_scalpel_16550:HG3_Ill_manta_3811:HG3_Ill_SVrefine2DISCOVARDovetail_12376:HG3_Ill_GATKHCSBGrefine_11316:HG3_10X_allpass_3299:HG2_PB_SVrefine2PBcRplusDovetail_4752:HG2_PB_SVrefine2PB10Xhap12_12628:HG2_PB_SVrefine2Falcon2Bionano_8577:HG2_PB_SVrefine2Falcon1plusDovetail_5186:HG2_Ill_svaba_21429:HG2_Ill_scalpel_16200:HG2_Ill_manta_4658:HG2_Ill_SVrefine2DISCOVARplusDovetail_5578:HG2_Ill_GATKHCSBGrefine_11402:HG2_10X_allpass_2677:HG2_10X_SVrefine210Xhap12_12066;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12066:HG2_10X_allpass_2677:HG2_Ill_GATKHCSBGrefine_11402:HG2_Ill_SVrefine2DISCOVARplusDovetail_5578:HG2_Ill_manta_4658:HG2_Ill_scalpel_16200:HG2_Ill_svaba_21429:HG2_PB_SVrefine2Falcon1plusDovetail_5186:HG2_PB_SVrefine2Falcon2Bionano_8577:HG2_PB_SVrefine2PB10Xhap12_12628:HG2_PB_SVrefine2PBcRplusDovetail_4752:HG3_10X_allpass_3299:HG3_Ill_GATKHCSBGrefine_11316:HG3_Ill_SVrefine2DISCOVARDovetail_12376:HG3_Ill_manta_3811:HG3_Ill_scalpel_16550:HG3_Ill_svaba_21634:HG3_PB_SVrefine2Falcon1Dovetail_10746:HG3_PB_SVrefine2PBcRDovetail_8437:HG4_10X_allpass_3143:HG4_Ill_GATKHCSBGrefine_11763:HG4_Ill_SVrefine2DISCOVARDovetail_12144:HG4_Ill_manta_3950:HG4_Ill_scalpel_15793:HG4_Ill_svaba_21367:HG4_PB_SVrefine2Falcon1Dovetail_10755:HG4_PB_SVrefine2PBcRDovetail_8691;NumExactMatchSVs=27;ClusterMaxShiftDist=0.119548;ClusterMaxSizeDiff=0.119548;ClusterMaxEditDist=0.119548;PBcalls=18;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-778;DistForward=-297;DistMin=-778;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=18:45996144-45996479;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1623.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:69:1/1:0:12:2:12:1/1:0:18:0:14:1/1:0:48:0/1:2:18:.:.:.
chr18	46159351	HG2_Ill_GATKHCSBGrefine_11403	TAGGGTTGCATACGGATGTGCACGAAGCCTCAGGGTCTGATTTGTGCGTGCCCATCAGGAGGCCCCATCCTGCCAAGGC	T	20	PASS	ClusterIDs=HG2_CG_vcfBeta_9830:HG2_PB_PB10Xdip_14182:HG3_PB_HySA_26170:HG2_PB_HySA_31623:HG3_PB_pbsv_17057:HG3_PB_assemblyticsfalcon_11555:HG3_Ill_svaba_21637:HG3_Ill_scalpel_16551:HG3_Ill_manta_3812:HG3_Ill_Krunchall_22845:HG3_Ill_GATKHC_27346:HG3_Ill_GATKHCSBGrefine_11318:HG3_Ill_Cortex_1578:HG3_Ill_250bpfermikitraw_22264:HG3_Ill_150bpfermikitraw_21632:HG3_CG_vcfBeta_9310:HG3_10X_allpass_3300:HG2_PB_pbsv_17388:HG2_PB_assemblyticsPBcR_11195:HG2_Ill_svaba_21432:HG2_Ill_scalpel_16201:HG2_Ill_breakscan11_2490:HG2_Ill_SpiralSDKrefine_7320:HG2_Ill_Krunchall_23248:HG2_Ill_GATKHC_27474:HG2_Ill_GATKHCSBGrefine_11403:HG2_Ill_Cortex_3705:HG2_Ill_250bpfermikitraw_22910:HG2_Ill_150bpfermikitraw_21606;NumClusterSVs=29;ExactMatchIDs=HG2_CG_vcfBeta_9830:HG3_PB_pbsv_17057:HG3_PB_assemblyticsfalcon_11555:HG3_Ill_svaba_21637:HG3_Ill_scalpel_16551:HG3_Ill_manta_3812:HG3_Ill_Krunchall_22845:HG3_Ill_GATKHC_27346:HG3_Ill_GATKHCSBGrefine_11318:HG3_Ill_Cortex_1578:HG3_Ill_250bpfermikitraw_22264:HG3_Ill_150bpfermikitraw_21632:HG3_CG_vcfBeta_9310:HG3_10X_allpass_3300:HG2_PB_pbsv_17388:HG2_PB_assemblyticsPBcR_11195:HG2_Ill_svaba_21432:HG2_Ill_scalpel_16201:HG2_Ill_breakscan11_2490:HG2_Ill_SpiralSDKrefine_7320:HG2_Ill_Krunchall_23248:HG2_Ill_GATKHC_27474:HG2_Ill_GATKHCSBGrefine_11403:HG2_Ill_Cortex_3705:HG2_Ill_250bpfermikitraw_22910:HG2_Ill_150bpfermikitraw_21606;NumExactMatchSVs=26;ClusterMaxShiftDist=0.177215;ClusterMaxSizeDiff=0.177215;ClusterMaxEditDist=0.177215;PBcalls=7;Illcalls=19;TenXcalls=1;CGcalls=2;PBexactcalls=4;Illexactcalls=19;TenXexactcalls=1;CGexactcalls=2;HG2count=15;HG3count=14;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-78;DistBack=8867;DistForward=31654;DistMin=8867;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:46159350-46159430;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1624.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:29:./.:20:7:2:18:0|1:32:0:0:30:0/1:35:21:./.:.:.:.:.:.
chr18	46396469	HG3_Ill_GATKHC_27351	GGTATATACGCACACACGCAGGGAGCGAGGTATGTGTGGTTGGAGAGGGTTGCGTTGTGTGTTGTGTGGGGTGCGGGATGTA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_17391:HG3_PB_assemblyticsfalcon_11559:HG2_PB_assemblyticsfalcon_11565:HG4_PB_pbsv_17288:HG2_PB_assemblyticsPBcR_11199:HG4_Ill_GATKHC_27423:HG3_Ill_GATKHC_27351;NumClusterSVs=7;ExactMatchIDs=HG3_Ill_GATKHC_27351:HG4_Ill_GATKHC_27423;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0368098;ClusterMaxSizeDiff=0.0368098;ClusterMaxEditDist=0.256098;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-81;DistBack=106;DistForward=-22;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=494;REFWIDENED=18:46396363-46396937;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1625.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:26:1|0:5:20:18:1:./.:3:15:1:9:./.:1:5:./.:.:.:.:.:.
chr18	47694974	HG4_Ill_SVrefine2DISCOVARDovetail_12149	TCCAGGACCCTCCCCACTAGACCCCCACCACTGTTCCAACCCTGTGTGAATCTCAGACACCACGACCCCTAACCAGGTCTTGGTCAATCACCCTCCTCACTTTCTTGTTTTGGTCTTAAGTGTCCAAAACACTCAGACTTTAATTTTTTAGTAATTTTTTAAAAGATGACATATATGGAAAAGTATAGAAATCCTAAAGAACAGCTCAATGAACTTTCATAAATTCACATATCTGTGTAAGCAGCATTCAGATCGGAAGTTACATTATCAGCATCCCAGAAGCCCCATGCCTGTGCCCACTTCTAGCCAGAAATGTGTTTTCCATCAGAAATGTATTATTTCGATCCTCCAAGCAACTATCACTTCTGAGTGATCTGTCCCCATAAAGTCAGAGAGAGAAGGGCGAAAAAGCTATATAGGGGGCTTGGCATAGTGGCTCACTCCTGTAATCACAGCACTTTGGGAGGCCAAGGTGGAGGACTGCTTGAGCCCAAGAATTGAGACCATCCTGGGCAGCATAGGGAGGCCCCATGCCTACAAAAAATAAAACTAAAAAAAAGCTAGATGTGGCAGCACATGCCTGTGGTCCCTGCTATTCAAGAGGCTGAGGCAGGAGGATCCCTTGAGCCCAAGAGGCTGCAGTGAGCGATAATGATGCCAGTATACTCCAGCCTGGGCAAAGAGCAAGACCTTGTCTCAAAAAAGAAAAGCTACATAGGAAATGCAGGGGAGGGTAATGAGTCAGCATTTAATCAAGTCCCTCCTGAGGACCAGGTAACATGACAGGTAGAGAAACCTGGCATACACCATCTTAAGCAAGTGATCAAAGTTACCACCACCAGTAACAGGACAAATTAGACATAACATGCCACCGCATGGGTTGCAATCATCATCACAGTATCCAGAGAAAAAGACATGGCCCAAGTGGAGAGCCTCTCTACAGTGACTGGCTGTAATCTACACAAACTGTCCAGGCCATGAAAGTCAAGGAAATACTGAGGAAACGTTCCAGATTGGAAGAGACTAGAGAGAGATGACAAGTGGGTGTGATGTATAACCCTGGATTGGTACCGTTATCATAAAGGGTATTACTGAGTCAATGGACAAAACTTTAAACCCAATTCAAGGTATATGAGTGTGCCTTGAATTACTCTTGCAATTTTCCTGAAGTCTGAAAAGATTTCAAAACACAGTATTTTAAAGAAATTTTTGCTCTTCACCTTTCCACTTGCTTTCCACCTAGAATACAGATGTGAGGATCAAGTCCCATGATGAGCAAGGTTAGCAGGACAATGAGATAGGAGCCGTGGACCTGCCACACGGGCCCCAGACTGCCCACCTCCAAAAATACTGTAGTATGGAATAAAATAAACTCTTTGATTGTCGATGTCATGGTAGTAGGGTTTTCTGTTACAGCCAAAGAAGTCATAACTGATACATTTAATAGGTAGAAGACAGAAGACTATGATTCCATTACTATTTCCCCACTATTGCTAATAGGAAAACCCACCAAAAAGTTAACAGAAAAGCTGTGACTTGCTGCATGGACAAGAGGGCAGAGAAGCTGTGAGAATGCATTTTGTCCAGCAGTGGGCAGTGAGGAAAGGAGGCTTGGCCGGAAGCATCAGTAGCAGGGCCTCCAGGATCTCTGTAGCACCGCAGCATCGCAATGAGTCAAAGCAGGTTTTCAAGTTTTCCATCAGAAATGTACTATTTCGATAATACATTTTGACTTTTGACTAGACCACCACAAGAACACCGCCTCTATGAGAAAGATCCTAGATGCTAGACTTAAGGTAACCTTTAGAATATTACCTACAAATAAACGGGGACTTTGATAAATAACTATTCATGTATAATTTGACTTTAGAAATCATTCTATATTTTATTTTCTAATCACATTTTTATTACCATGATACCTCATGTTGGGCCAATATGCTTTCCTCTTTAAAGTTTCATTTTACCACTATTTTGCTTTCTTCTCACTCCGAACAGTACTGTGGGGTGACTCCAGTTGTTTCCATTTAACACATAAGAAAAAGTTGAGCAAGATTAAGCCACTGGTCCAAGGTCTCACAGCAAGGAACTGGCATAAATGGAACAAGAATTCTGAACCATGACTCCCAATCCAGTGTTCTCCTAATCCACATAGTATATCGTTAACAACACTGCCAGTTCAACATGGCTTCACTTTTTGAGATTAGAAGATTATATTATGAATGACTAGAACAAGAGATCAAGTAAGAGTAAACAGGAAAAGAGACATTTTACCCAAACTTAGAAGAAAGAACGTACAGGAAATTCAGCACTCAATCTTTCTCTACTTGCTCACATTGGTTTCAGAAGTGAAGAGCTGCAAAATCCCGTTACCCCGTGGTGAACCCACACCTGCCTCCCTGAGGCTCTCTCTCCTTGCAGCTAGCATCCCCTCAGCTAGTATTTGCCAGGCCCTCAAAATCCTACAGAAATCCCAGAATCTTGGGATACTTGGCCGCCAGTCTCATGCAGCCCTGTTCCTCAAATCTGGAAGTCCTGAATGCCTGTTCCATAAGACAGTGCTGGGCACTTGGCACGATCTTCACCCTCACAGATAAGTTGAGGAGATAAGGCAAATATGCAAAAAGTAAAGTAATCATCCAAGAGATATTAAATAACACTGCAGGCCAACGACAGCAGCAGAGGCATGAGAGGAGATGCCAAGACCATGTAATGGATGGACACGATTTACAGTAATTGCCTCTGTACAGAGAATAGAGTTCCTTAGGCTGAAGAAGTCAGGAAGGGCTTATAGAGAAGCTGCAATTTGACCTTGGTCTCGAGAGAGACCATAAACTTAGAAATATAAAGGTACAGAACATTCCAGGCAGATACAGCATGGATATGGAAAACTCAAGGTACATTCAGACGATTATGAGTGGGCTGATTCTGCTGGGGAAACAGTGGATCATACAAGGCAATAATTAAATGATAGATGATCAGTTACTATGCTCTGGATATAAGGGAGGCTTCAACCTGGCTTGAACAGAAGGGCATTTCTATCTCATGTGACAAGAAGTCCAGAGTTCTGGTGGGTTCTGCAGTGTTGTTTCAGCCCAAGTCACATGGCTGCATAGAGGAGGGGTTTTGTCAAGATGTTGAAATGGAGTTGTGGATGATCCCAGACAGGCAACCATAAATGGTTATTGTTTAGTGAGTGTCAATCCCCACCCCATGTATTTCACCCTTAAAACCAGAGGAAAGAATACAGAGAGAAAGCCAGAAGAGGCTCCTCATATAACAGCCAAATCCAAAACTCAATTCAGAAAAATCTGCAGCAATGGATCTTCTTCCTTGTGCCTATTTACTAAAAGACATATATGAATTCTTAAGAGGATTAAACCAGAATGGCTGTTCAGAGTCTGTGGAATCAGCAA	CTGG	20	PASS	ClusterIDs=HG2_Ill_Krunchall_23269:HG4_Ill_GATKHCSBGrefine_11774:HG2_10X_allpass_2678:HG4_PB_pbsv_17301:HG2_PB_pbsv_17401:HG2_Ill_tnscope_1854:HG4_10X_allpass_3146:HG4_PB_SVrefine2PBcRDovetail_8703:HG4_PB_SVrefine2Falcon1Dovetail_10768:HG4_Ill_SVrefine2DISCOVARDovetail_12149:HG3_PB_SVrefine2Falcon1Dovetail_10758:HG2_PB_assemblyticsfalcon_11585:HG2_PB_assemblyticsPBcR_11217:HG2_PB_SVrefine2PBcRplusDovetail_4762:HG2_PB_SVrefine2Falcon1plusDovetail_5195:HG2_10X_SVrefine210Xhap12_12072:HG2_Ill_SpiralSDKrefine_7331:HG4_Ill_MetaSV_2204:HG2_Ill_MetaSV_2140:HG4_PB_assemblyticsfalcon_11396:HG3_PB_assemblyticsfalcon_11580;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12072:HG2_PB_SVrefine2Falcon1plusDovetail_5195:HG2_PB_SVrefine2PBcRplusDovetail_4762:HG2_PB_assemblyticsPBcR_11217:HG2_PB_assemblyticsfalcon_11585:HG3_PB_SVrefine2Falcon1Dovetail_10758:HG4_Ill_SVrefine2DISCOVARDovetail_12149:HG4_PB_SVrefine2Falcon1Dovetail_10768:HG4_PB_SVrefine2PBcRDovetail_8703;NumExactMatchSVs=9;ClusterMaxShiftDist=0.176563;ClusterMaxSizeDiff=0.176563;ClusterMaxEditDist=0.176563;PBcalls=11;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-3409;DistBack=-506;DistForward=16768;DistMin=-506;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:47694974-47698386;PctSeqSimilarity=0.9993;PctSizeSimilarity=0.9994;PctRecOverlap=0.9985;SizeDiff=2;StartDistance=-5;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1627.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:68:67:0|1:45:8:7:28:./.:48:2:3:19:0/1:50:10:0/1:276:119:3269:.:.
chr18	50925977	HG4_Ill_GATKHCSBGrefine_11789	CAAAGAAATCAGAGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_Spiral_1142:HG3_PB_assemblyticsfalcon_11606:HG2_PB_assemblyticsfalcon_11614:HG2_PB_assemblyticsPBcR_11242:HG4_PB_pbsv_17312:HG4_Ill_Krunchall_23638:HG3_Ill_Krunchall_22895:HG2_Ill_Krunchall_23313:HG4_Ill_Spiral_1350:HG4_Ill_MetaSV_2208:HG3_PB_HySA_26214:HG3_Ill_MetaSV_2285:HG2_Ill_tnscope_1855:HG2_Ill_MetaSV_2142:HG4_PB_assemblyticsfalcon_11423:HG4_PB_SVrefine2PBcRDovetail_8709:HG4_PB_SVrefine2Falcon1Dovetail_10775:HG4_Ill_scalpel_15835:HG4_Ill_manta_3960:HG4_Ill_SVrefine2DISCOVARDovetail_12162:HG4_Ill_GATKHCSBGrefine_11789:HG4_10X_allpass_3149:HG3_PB_pbsv_17084:HG3_PB_SVrefine2PBcRDovetail_8447:HG3_Ill_scalpel_16586:HG3_Ill_manta_3821:HG3_Ill_SVrefine2DISCOVARDovetail_12392:HG3_Ill_GATKHCSBGrefine_11336:HG3_10X_allpass_3302:HG2_PB_pbsv_17412:HG2_PB_SVrefine2PBcRplusDovetail_4768:HG2_PB_SVrefine2PB10Xhap12_12645:HG2_PB_SVrefine2Falcon1plusDovetail_5200:HG2_Ill_scalpel_16242:HG2_Ill_manta_4668:HG2_Ill_SVrefine2DISCOVARplusDovetail_5599:HG2_Ill_GATKHCSBGrefine_11427:HG2_10X_allpass_2681:HG2_10X_SVrefine210Xhap12_12083:HG2_Ill_breakscan11_2494:HG3_Ill_Spiral_17777;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12083:HG2_10X_allpass_2681:HG2_Ill_GATKHCSBGrefine_11427:HG2_Ill_SVrefine2DISCOVARplusDovetail_5599:HG2_Ill_manta_4668:HG2_Ill_scalpel_16242:HG2_PB_SVrefine2Falcon1plusDovetail_5200:HG2_PB_SVrefine2PB10Xhap12_12645:HG2_PB_SVrefine2PBcRplusDovetail_4768:HG2_PB_pbsv_17412:HG3_10X_allpass_3302:HG3_Ill_GATKHCSBGrefine_11336:HG3_Ill_SVrefine2DISCOVARDovetail_12392:HG3_Ill_manta_3821:HG3_Ill_scalpel_16586:HG3_PB_SVrefine2PBcRDovetail_8447:HG3_PB_pbsv_17084:HG4_10X_allpass_3149:HG4_Ill_GATKHCSBGrefine_11789:HG4_Ill_SVrefine2DISCOVARDovetail_12162:HG4_Ill_manta_3960:HG4_Ill_scalpel_15835:HG4_PB_SVrefine2Falcon1Dovetail_10775:HG4_PB_SVrefine2PBcRDovetail_8709;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0913386;ClusterMaxSizeDiff=0.0913386;ClusterMaxEditDist=0.0913386;PBcalls=14;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=18462;DistForward=4449;DistMin=4449;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=18:50925978-50926315;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1628.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:95:1/1:0:48:0:33:1/1:0:27:0:16:1/1:0:39:0/1:2:15:.:.:.
chr18	51436059	HG2_10X_SVrefine210Xhap12_12087	AACCTTATCTTAATAGATAAGAACCAATCTTAGTAGTGTTAGTAGTATCTTAGAACCAAATCTTAGTAGTGTTCCCAACTAGCGTCTTGCATCTCTTCAAATCAGAGGATGTTACTGGGAACTTGTTTCAATGCCCCCCCGGGGTTTCCCAGGATAAGATCTGAGGTAGGTAGTTGTCCCACCCAGATCAGATAGATGACCCCTAGGTGGCAGTATTGGCCACTTACATATTCCTACCAATCAGAATATCAGCTTTTTGTCCAGCCAAAATGCGTTTGAAATCACACACGATGTAATTTACAAAATAAAGTTTCACAAATAATTATTTATGGTAATATATTGACTTTAAAATAGACTACCA	GAATAGAACCTT	20	PASS	ClusterIDs=HG2_PB_pbsv_17416:HG4_Ill_GATKHCSBGrefine_11793:HG2_Ill_GATKHCSBGrefine_11432:HG4_Ill_manta_3962:HG2_Ill_manta_4671:HG2_Ill_Spiral_1143:HG4_PB_SVrefine2PBcRDovetail_8711:HG4_Ill_SVrefine2DISCOVARDovetail_12164:HG3_PB_assemblyticsfalcon_11612:HG3_PB_SVrefine2Falcon1Dovetail_10762:HG2_PB_assemblyticsfalcon_11621:HG2_PB_SVrefine2Falcon1plusDovetail_5205:HG2_10X_SVrefine210Xhap12_12087:HG2_10X_allpass_2682:HG4_Ill_Krunchall_23646:HG2_Ill_Krunchall_23316:HG4_Ill_MetaSV_2210:HG2_Ill_MetaSV_2144:HG4_10X_allpass_3150:HG2_Ill_SpiralSDKrefine_7355:HG2_Ill_tnscope_1856:HG4_Ill_Cortex_1530:HG2_Ill_Cortex_3726:HG4_Ill_Spiral_1351:HG4_PB_pbsv_17318;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12087:HG2_PB_SVrefine2Falcon1plusDovetail_5205:HG2_PB_assemblyticsfalcon_11621:HG3_PB_SVrefine2Falcon1Dovetail_10762:HG3_PB_assemblyticsfalcon_11612:HG4_Ill_SVrefine2DISCOVARDovetail_12164:HG4_PB_SVrefine2PBcRDovetail_8711;NumExactMatchSVs=7;ClusterMaxShiftDist=0.196672;ClusterMaxSizeDiff=0.196672;ClusterMaxEditDist=0.196672;PBcalls=7;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-349;DistBack=-20;DistForward=-339;DistMin=-339;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:51436059-51436419;PctSeqSimilarity=0.9597;PctSizeSimilarity=1;PctRecOverlap=0.9668;SizeDiff=0;StartDistance=1;EndDistance=12;GTMatch=0;TruScore=97;MatchId=1629.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:54:18:0|1:48:0:1:18:0|1:37:0:0:34:0/1:66:17:0/1:34:7:.:.:.
chr18	51831868	HG2_PB_PB10Xdip_14203	GGTATTTTATTCTCTTTGTAGCAATTGTGAATGGGAGTTCACTCATGATTTGACTCTCTGTTTGTCTGTTATTGGTGTATATGAATGCTTGTGATTTTTGCACATTGATTTTGTGTCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGGTTTTGGGCTGAGACGATGGGGTTTTCTAAA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_4771:HG4_PB_HySA_25331:HG4_Ill_MetaSV_2211:HG2_Ill_MetaSV_2145:HG4_PB_assemblyticsfalcon_11428:HG4_PB_SVrefine2PBcRDovetail_8712:HG4_PB_SVrefine2Falcon1Dovetail_10777:HG4_Ill_GATKHCSBGrefine_11795:HG2_PB_SVrefine2PB10Xhap12_12649:HG2_PB_PB10Xdip_14203:HG2_Ill_GATKHCSBGrefine_11434:HG2_10X_allpass_2683:HG2_PB_PB10Xdip_14202:HG4_PB_pbsv_17321:HG2_PB_pbsv_17418:HG2_PB_SVrefine2PB10Xhap12_12648:HG2_PB_assemblyticsPBcR_11248;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_2683:HG2_Ill_GATKHCSBGrefine_11434:HG2_PB_PB10Xdip_14203:HG2_PB_SVrefine2PB10Xhap12_12649:HG4_Ill_GATKHCSBGrefine_11795:HG4_PB_SVrefine2Falcon1Dovetail_10777:HG4_PB_SVrefine2PBcRDovetail_8712:HG4_PB_assemblyticsfalcon_11428;NumExactMatchSVs=8;ClusterMaxShiftDist=0.112532;ClusterMaxSizeDiff=0.112532;ClusterMaxEditDist=0.118252;PBcalls=12;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-184;DistBack=69122;DistForward=62;DistMin=62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:51831869-51832052;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1630.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:30:0|1:43:0:2:29:0|1:54:0:0:24:0/1:35:18:./.:.:.:.:.:.
chr18	51952963	HG3_PB_SVrefine2PBcRDovetail_8451	TAGCCAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGTACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTTGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACGGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAGCCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGGAAAGTGTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAATTGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGACTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAGATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAACGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATATGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2495:HG3_10X_allpass_3303:HG4_PB_assemblyticsfalcon_11430:HG2_PB_assemblyticsfalcon_11626:HG2_PB_assemblyticsPBcR_11250:HG4_10X_allpass_3151:HG2_10X_allpass_2684:HG4_Ill_Krunchall_23650:HG3_Ill_Krunchall_22901:HG2_Ill_Krunchall_23320:HG3_Ill_MetaSV_2287:HG2_Ill_tnscope_1857:HG4_PB_pbsv_17323:HG4_PB_SVrefine2PBcRDovetail_8714:HG4_PB_SVrefine2Falcon1Dovetail_10779:HG4_Ill_SVrefine2DISCOVARDovetail_12167:HG4_Ill_MetaSV_2212:HG4_Ill_GATKHCSBGrefine_11796:HG3_PB_pbsv_17091:HG3_PB_SVrefine2PBcRDovetail_8451:HG3_Ill_GATKHCSBGrefine_11340:HG2_PB_pbsv_17420:HG2_PB_SVrefine2PBcRplusDovetail_4773:HG2_PB_SVrefine2PB10Xhap12_12651:HG2_PB_SVrefine2Falcon1plusDovetail_5207:HG2_Ill_SVrefine2DISCOVARplusDovetail_5605:HG2_Ill_MetaSV_2146:HG2_Ill_GATKHCSBGrefine_11435:HG2_10X_SVrefine210Xhap12_12089;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12089:HG2_Ill_GATKHCSBGrefine_11435:HG2_Ill_MetaSV_2146:HG2_Ill_SVrefine2DISCOVARplusDovetail_5605:HG2_PB_SVrefine2Falcon1plusDovetail_5207:HG2_PB_SVrefine2PB10Xhap12_12651:HG2_PB_SVrefine2PBcRplusDovetail_4773:HG2_PB_pbsv_17420:HG3_Ill_GATKHCSBGrefine_11340:HG3_PB_SVrefine2PBcRDovetail_8451:HG3_PB_pbsv_17091:HG4_Ill_GATKHCSBGrefine_11796:HG4_Ill_MetaSV_2212:HG4_Ill_SVrefine2DISCOVARDovetail_12167:HG4_PB_SVrefine2Falcon1Dovetail_10779:HG4_PB_SVrefine2PBcRDovetail_8714:HG4_PB_pbsv_17323;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0242815;ClusterMaxSizeDiff=0.0242815;ClusterMaxEditDist=0.0242815;PBcalls=12;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3996;DistBack=32104;DistForward=-3992;DistMin=-3992;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=18:51952964-51956964;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1631.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:96:1/1:0:15:0:30:1/1:0:41:0:34:1/1:0:32:1/1:2:330:3963:.:.
chr18	53467161	HG2_PB_SVrefine2Falcon1plusDovetail_5209	TCTGGCTTTGTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12092:HG3_PB_assemblyticsfalcon_11622:HG2_PB_pbsv_17423:HG3_PB_pbsv_17095:HG3_10X_allpass_3304:HG3_PB_SVrefine2PBcRDovetail_8453:HG3_PB_SVrefine2Falcon1Dovetail_10764:HG3_Ill_scalpel_16596:HG3_Ill_SVrefine2DISCOVARDovetail_12406:HG3_Ill_MetaSV_2289:HG3_Ill_GATKHCSBGrefine_11344:HG2_PB_assemblyticsfalcon_11634:HG2_PB_SVrefine2PB10Xhap12_12653:HG2_PB_SVrefine2Falcon1plusDovetail_5209:HG2_Ill_scalpel_16254:HG2_Ill_MetaSV_2147:HG2_Ill_GATKHCSBGrefine_11439;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12092:HG3_PB_SVrefine2PBcRDovetail_8453:HG3_PB_SVrefine2Falcon1Dovetail_10764:HG3_Ill_scalpel_16596:HG3_Ill_SVrefine2DISCOVARDovetail_12406:HG3_Ill_MetaSV_2289:HG3_Ill_GATKHCSBGrefine_11344:HG2_PB_assemblyticsfalcon_11634:HG2_PB_SVrefine2PB10Xhap12_12653:HG2_PB_SVrefine2Falcon1plusDovetail_5209:HG2_Ill_scalpel_16254:HG2_Ill_MetaSV_2147:HG2_Ill_GATKHCSBGrefine_11439;NumExactMatchSVs=13;ClusterMaxShiftDist=0.116505;ClusterMaxSizeDiff=0.116505;ClusterMaxEditDist=0.116505;PBcalls=8;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=-303;DistForward=5948;DistMin=-303;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=18:53467162-53467490;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1632.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:30:0|1:25:3:0:21:./.:0:2:32:0:0/1:19:9:0/1:28:8:.:.:.
chr18	53765644	HG2_Ill_manta_4673	TATCTATCTATCTATCTATCTATCATCTATCTATCTATCTATCTATCATCATCTATCTATCTATC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_17326:HG3_Ill_Krunchall_22915:HG3_PB_assemblyticsfalcon_11626:HG3_Ill_scalpel_16601:HG2_Ill_scalpel_16258:HG3_Ill_GATKHC_27425:HG3_Ill_GATKHCSBGrefine_11345:HG2_Ill_GATKHC_27564:HG2_Ill_GATKHCSBGrefine_11441:HG4_Ill_GATKHC_27507:HG4_Ill_GATKHCSBGrefine_11801:HG3_Ill_svaba_21699:HG3_Ill_scalpel_16600:HG3_Ill_manta_3824:HG3_Ill_Krunchall_22914:HG3_Ill_250bpfermikitraw_22328:HG3_Ill_150bpfermikitraw_21696:HG2_Ill_svaba_21503:HG2_Ill_scalpel_16257:HG2_Ill_manta_4673:HG2_Ill_Krunchall_23336:HG2_Ill_GATKHC_27563:HG2_Ill_GATKHCSBGrefine_11440:HG2_Ill_250bpfermikitraw_22995:HG2_Ill_150bpfermikitraw_21682:HG4_Ill_svaba_21430:HG4_Ill_Krunchall_23662:HG4_Ill_250bpfermikitraw_22623:HG4_Ill_150bpfermikitraw_21769:HG2_Ill_svaba_21502:HG2_Ill_scalpel_16256:HG2_Ill_SpiralSDKrefine_7368:HG2_Ill_Krunchall_23335:HG2_Ill_250bpfermikitraw_22994:HG2_Ill_150bpfermikitraw_21681:HG3_PB_HySA_26244:HG4_PB_assemblyticsfalcon_11437:HG3_Ill_svaba_21698:HG3_Ill_scalpel_16599:HG3_Ill_Krunchall_22913:HG3_Ill_250bpfermikitraw_22327:HG3_Ill_150bpfermikitraw_21695:HG2_PB_assemblyticsfalcon_11636:HG2_PB_assemblyticsPBcR_11259:HG3_PB_pbsv_17097:HG2_PB_pbsv_17425;NumClusterSVs=46;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21682:HG2_Ill_250bpfermikitraw_22995:HG2_Ill_GATKHCSBGrefine_11440:HG2_Ill_GATKHC_27563:HG2_Ill_Krunchall_23336:HG2_Ill_manta_4673:HG2_Ill_scalpel_16257:HG2_Ill_svaba_21503:HG3_Ill_150bpfermikitraw_21696:HG3_Ill_250bpfermikitraw_22328:HG3_Ill_Krunchall_22914:HG3_Ill_manta_3824:HG3_Ill_scalpel_16600:HG3_Ill_svaba_21699:HG4_Ill_GATKHCSBGrefine_11801:HG4_Ill_GATKHC_27507;NumExactMatchSVs=16;ClusterMaxShiftDist=0.190476;ClusterMaxSizeDiff=0.190476;ClusterMaxEditDist=0.23622;PBcalls=8;Illcalls=38;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=20;HG3count=18;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-64;DistBack=2;DistForward=-42;DistMin=-42;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=96;REFWIDENED=18:53765622-53765781;PctSeqSimilarity=0.9635;PctSizeSimilarity=0.9275;PctRecOverlap=0.7143;SizeDiff=-5;StartDistance=20;EndDistance=15;GTMatch=0;TruScore=86;MatchId=1633.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:1/1:1:29:1:18:1/1:0:24:0:25:1/1:0:37:./.:.:.:.:.:.
chr18	54946737	HG3_PB_SVrefine2Falcon1Dovetail_10769	AAGAAGGAGTCCTGTGGCCAGGTGAGAAGGAGTGTTCTGGGCAATTAGCACCAAATGTTCACCACCCCGGAGACCTCACTGCTATTCTTTCACCTCTTTGTACCAACAGAGTTGCTTTTCCAAAGCATGAATAAAACTTCATAACCCCTCACCTCAGTAGTCATTTCCACATTTAATAAACATTTATTGGACACCCACTCTGTGCCAGGCTCTGGCCAGTTCTTGAAAACAGCCATGAGCAAATAGATAAGGTCCTCCTAGGTGGGAGCCTACTTCTCAAGACACCCCTCCCAAGCCCTGATTTCTGTTTGTCTCTCCAGCCCCATTTCCTTCTCCAGGCCAACAATCACCAGCTGCAGCCACAGGGGCCTCGCCCCCACCCCATCTGCTCCAAGTTACACTGTTAGTCTGGACCAGGTTTTCGTGTCCACATATGCAGTAGATACTTCCCACCTGCTCTATCTTTCCCACCTAATTCATCCTTCAAGGCCAGCTCAAATGTCTCCTCTTCCTGGAGCCATACCTGATTGCCCATCTGGATTAATTGCTCCTCCCTCTGCACTTCCACAGCACTGGGGTTCTTATGCAGGTTTTGCACGTCTTCCATCCTGTCTGGTATGCTGGTTATTTGCATGACTGCTTTCTCCAGTGGACTGCCATCTCGTGAAGGTCGCCATGTCCCGTTAGCCCCTGATTCCCACCCCAGAGCCCAGCTCTATGCTGTGCATATAACAGGCACCCACTAAATACTAGTTAAAGGATAAAACAAAAGCTAAGCAAAAAAGTACTCCGGTGATATCTGTCCATCAATCTGCCCTCCCCTTGGGCATTGGCTGATGTTGAGCCAGGCCACTGTGTGATGCCCACATAGTTATAATACATCCCTGAGCTCCTCTGGTGAAACAAATGTGAACACTGTCATCGGTCTCCCCACTTCTAAACATGCTGTCCCAAAACCTGGTGGCAGAGCAATGTGACTGAAGATGGGGCAGAGTTTCTCCTGTTGCCTCAGAATTCCAGTGAAGATCCAACACTGAAGACAAAACGTGTTAAAATAGTCAACATTCTCAGCTCAGAAAACTAGCAGTTGGGTTCCTTCTTCCTCAACATTCTTAGCTGAGAAAACCTCTGGCAGTTGGGATCCTTTTTCCAGAGCTGACTGAAAGGCATCATTTTAAAAACCTCCCTATCACCTCCGATCACTGTTGAAAAAGCATTAAACTGTAAGAAGGGGTTAGTATTGGGGGAAGCATGTCGTTTCTAAGGATGGGAAAGGAAAATGAAGTGCTTCTCCTCCCTGATCCAAGAGAGGCAGCTTCATGAAACTTCTGTATGAAAATGGGAGCGTCTGTAGGAAGAGGGACTCTATTTACATAACTCAGGTCTGAAAAATAGTCTCTGCAAAACCTCATAAAGACAAGGTCTCGACATCTTCCCAGACAACCCATGTGATCTCACTTCCCTTGTACTTTCCAGACCCTTTGTGAACTTGAGCACATTGGAACATGTTTGGCCTCCCTCAAGACACTGTGAGGCCAACTGGTGGTGATATCCAACGCTCATATAGCACTTTATACTCTTCAAAGGCTTTCACATACATAGTTGCTTATTTAATTCTCACATATGTAGTTGCTTATATAATATGCTTTCACATATACAGTTGCTTATTTAATTCTCATAGGAAACATAATTTACCCTAGATCAGACAGACAATTTGAGGTGGAATCACCTAGAACCAGCCACGCTAACTCCTGAATCAGCAATTACTCCTTCCATTGGAACATGCAGATATGTTCCTGGGACTGTCTTCGGGTGGTGCTAGCGTAGATGTGCAACCACTGAGCAGGCCTGTGTATGACTGTCTGGTGCAGAACTAGTTATCTTCCCATCACTACTGCTTATTCAACCAAATCTAAAGCCTTTTTGTTAAAAGAATGATATTCCCATAGGCAGAGTCTGTGATCTATACAACCACAACAAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_17102:HG4_PB_pbsv_17333:HG3_PB_HySA_26256:HG2_PB_HySA_31711:HG2_Ill_tnscope_1858:HG4_PB_assemblyticsfalcon_11449:HG4_PB_SVrefine2Falcon1Dovetail_10786:HG4_Ill_SVrefine2DISCOVARDovetail_12177:HG4_Ill_MetaSV_2216:HG4_Ill_Cortex_1534:HG4_10X_allpass_3152:HG3_PB_assemblyticsfalcon_11635:HG3_PB_SVrefine2PBcRDovetail_8457:HG3_PB_SVrefine2Falcon1Dovetail_10769:HG3_Ill_SVrefine2DISCOVARDovetail_12414:HG3_Ill_GATKHCSBGrefine_11349:HG3_Ill_Cortex_1587:HG3_10X_allpass_3305:HG2_PB_assemblyticsfalcon_11645:HG2_PB_assemblyticsPBcR_11270:HG2_PB_SVrefine2PBcRplusDovetail_4778:HG2_PB_SVrefine2PB10Xhap12_12658:HG2_PB_SVrefine2Falcon1plusDovetail_5214:HG2_Ill_breakscan11_2496:HG2_Ill_SpiralSDKrefine_7376:HG2_Ill_SVrefine2DISCOVARplusDovetail_5617:HG2_Ill_MetaSV_2149:HG2_Ill_GATKHCSBGrefine_11445:HG2_Ill_Cortex_3734:HG2_10X_SVrefine210Xhap12_12097:HG3_Ill_MetaSV_2291:HG3_Ill_Krunchall_22924:HG2_PB_pbsv_17431:HG2_Ill_Krunchall_23346:HG2_10X_allpass_2685;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12097:HG2_Ill_Cortex_3734:HG2_Ill_GATKHCSBGrefine_11445:HG2_Ill_MetaSV_2149:HG2_Ill_SVrefine2DISCOVARplusDovetail_5617:HG2_Ill_SpiralSDKrefine_7376:HG2_Ill_breakscan11_2496:HG2_PB_SVrefine2Falcon1plusDovetail_5214:HG2_PB_SVrefine2PB10Xhap12_12658:HG2_PB_SVrefine2PBcRplusDovetail_4778:HG2_PB_assemblyticsPBcR_11270:HG2_PB_assemblyticsfalcon_11645:HG3_10X_allpass_3305:HG3_Ill_Cortex_1587:HG3_Ill_GATKHCSBGrefine_11349:HG3_Ill_SVrefine2DISCOVARDovetail_12414:HG3_PB_SVrefine2Falcon1Dovetail_10769:HG3_PB_SVrefine2PBcRDovetail_8457:HG3_PB_assemblyticsfalcon_11635:HG4_10X_allpass_3152:HG4_Ill_Cortex_1534:HG4_Ill_MetaSV_2216:HG4_Ill_SVrefine2DISCOVARDovetail_12177:HG4_PB_SVrefine2Falcon1Dovetail_10786:HG4_PB_assemblyticsfalcon_11449;NumExactMatchSVs=25;ClusterMaxShiftDist=0.00151477;ClusterMaxSizeDiff=0.00151477;ClusterMaxEditDist=0.00201918;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1980;DistBack=1161;DistForward=-1980;DistMin=-1980;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=18:54946738-54948717;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1634.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:50:0|1:37:0:0:34:1|0:0:36:49:0:0/1:54:17:0/1:164:74:2414:.:.
chr18	55345623	HG3_PB_SVrefine2PBcRDovetail_8460	GCCTGGCCAACATAGTGAAACCCCGTCTCTACTAAAAATGTAAAAAATTAGCCACGTGTGGTGGTATGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCATAAACCCGGGAGGCAGAGGTTGCAGTGAACCGAGATCACACCATTGCACTCCAGCCCAGGCGATAGTTCGAGATTCTATCTCAAAAAAAAAAAAAGAAGAGAAAAGAAAAGAGTGTGGTGTTGATGGTATAGTGGTGAGCATAGCTGCCTTCCAAGCAATTGACCCGACTTCGATTCCCAGCCAATGCAGCAGGCTGACCTTTTGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12100:HG3_PB_pbsv_17109:HG2_PB_pbsv_17437:HG4_Ill_GATKHCSBGrefine_11807:HG2_10X_allpass_2687:HG4_PB_pbsv_17339:HG3_10X_allpass_3306:HG4_PB_HySA_25359:HG3_Ill_MetaSV_2293:HG4_Ill_MetaSV_2219:HG4_PB_SVrefine2PBcRDovetail_8721:HG4_PB_SVrefine2Falcon1Dovetail_10791:HG4_Ill_SVrefine2DISCOVARDovetail_12182:HG3_PB_SVrefine2PBcRDovetail_8460:HG3_PB_SVrefine2Falcon1Dovetail_10773:HG2_PB_SVrefine2PBcRplusDovetail_4782:HG2_PB_SVrefine2PB10Xhap12_12663:HG2_PB_SVrefine2Falcon1plusDovetail_5219:HG2_Ill_SVrefine2DISCOVARplusDovetail_5621;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12100:HG4_PB_SVrefine2PBcRDovetail_8721:HG4_PB_SVrefine2Falcon1Dovetail_10791:HG4_Ill_SVrefine2DISCOVARDovetail_12182:HG3_PB_SVrefine2PBcRDovetail_8460:HG3_PB_SVrefine2Falcon1Dovetail_10773:HG2_PB_SVrefine2PBcRplusDovetail_4782:HG2_PB_SVrefine2PB10Xhap12_12663:HG2_PB_SVrefine2Falcon1plusDovetail_5219:HG2_Ill_SVrefine2DISCOVARplusDovetail_5621;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0543131;ClusterMaxSizeDiff=0.0538827;ClusterMaxEditDist=0.0988836;PBcalls=11;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=5395;DistForward=-22;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=551;REFWIDENED=18:55345624-55346493;PctSeqSimilarity=0.9671;PctSizeSimilarity=0.9876;PctRecOverlap=0.1049;SizeDiff=-4;StartDistance=-286;EndDistance=-290;GTMatch=0;TruScore=68;MatchId=1636.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:26:0|1:25:5:4:20:0/0:41:0:25:0:0/0:42:0:0/0:43:2:.:.:.
chr18	55454632	HG3_Ill_GATKHC_27441	GCACTGCGGGAGGAGCTCCATCTAGAACACTGCGGGAGGAGCTCCATCTAGAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12104:HG2_PB_HySA_31721:HG2_PB_pbsv_17439:HG4_PB_pbsv_17340:HG4_Ill_Krunchall_23684:HG4_Ill_GATKHC_27527:HG4_Ill_GATKHCSBGrefine_11808:HG4_Ill_250bpfermikitraw_22643:HG4_Ill_150bpfermikitraw_21787:HG3_Ill_Krunchall_22931:HG3_Ill_GATKHC_27441:HG3_Ill_GATKHCSBGrefine_11352:HG3_Ill_250bpfermikitraw_22341:HG2_Ill_SpiralSDKrefine_7383:HG2_Ill_GATKHC_27582:HG2_Ill_GATKHCSBGrefine_11450:HG2_Ill_250bpfermikitraw_23015:HG2_Ill_150bpfermikitraw_21697:HG3_PB_pbsv_17111:HG3_PB_SVrefine2PBcRDovetail_8461:HG2_PB_SVrefine2PBcRplusDovetail_4783:HG2_PB_SVrefine2PB10Xhap12_12664:HG2_PB_SVrefine2Falcon1plusDovetail_5221:HG2_Ill_SVrefine2DISCOVARplusDovetail_5625;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21697:HG2_Ill_250bpfermikitraw_23015:HG2_Ill_GATKHCSBGrefine_11450:HG2_Ill_GATKHC_27582:HG2_Ill_SpiralSDKrefine_7383:HG3_Ill_250bpfermikitraw_22341:HG3_Ill_GATKHCSBGrefine_11352:HG3_Ill_GATKHC_27441:HG3_Ill_Krunchall_22931:HG4_Ill_150bpfermikitraw_21787:HG4_Ill_250bpfermikitraw_22643:HG4_Ill_GATKHCSBGrefine_11808:HG4_Ill_GATKHC_27527:HG4_Ill_Krunchall_23684;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.0761905;PBcalls=8;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-52;DistBack=28244;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=153;REFWIDENED=18:55454593-55454797;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1637.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:64:1/1:4:29:1:23:1/1:0:8:0:10:1/1:0:42:./.:.:.:.:.:.
chr18	55671122	HG4_Ill_scalpel_15865	ACAAACATTATTATTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2497:HG2_PB_assemblyticsPBcR_11285:HG4_Ill_Krunchall_23685:HG3_Ill_Krunchall_22933:HG2_Ill_Krunchall_23354:HG4_PB_assemblyticsfalcon_11460:HG3_PB_assemblyticsfalcon_11645:HG2_PB_assemblyticsfalcon_11658:HG4_PB_HySA_25361:HG2_PB_HySA_31724:HG3_PB_HySA_26266:HG4_Ill_MetaSV_2220:HG3_Ill_MetaSV_2294:HG2_Ill_tnscope_1860:HG2_Ill_MetaSV_2152:HG4_PB_pbsv_17341:HG4_PB_SVrefine2PBcRDovetail_8722:HG4_PB_SVrefine2Falcon1Dovetail_10792:HG4_Ill_svaba_21446:HG4_Ill_scalpel_15865:HG4_Ill_manta_3965:HG4_Ill_SVrefine2DISCOVARDovetail_12183:HG4_Ill_GATKHCSBGrefine_11809:HG4_10X_allpass_3154:HG3_PB_pbsv_17112:HG3_PB_SVrefine2PBcRDovetail_8462:HG3_PB_SVrefine2Falcon1Dovetail_10775:HG3_Ill_svaba_21716:HG3_Ill_scalpel_16612:HG3_Ill_manta_3826:HG3_Ill_SVrefine2DISCOVARDovetail_12418:HG3_Ill_GATKHCSBGrefine_11353:HG3_10X_allpass_3307:HG2_PB_pbsv_17440:HG2_PB_SVrefine2PBcRplusDovetail_4784:HG2_PB_SVrefine2PB10Xhap12_12665:HG2_PB_SVrefine2Falcon1plusDovetail_5222:HG2_Ill_svaba_21519:HG2_Ill_manta_4676:HG2_Ill_SVrefine2DISCOVARplusDovetail_5628:HG2_Ill_GATKHCSBGrefine_11451:HG2_10X_SVrefine210Xhap12_12105;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12105:HG2_Ill_GATKHCSBGrefine_11451:HG2_Ill_SVrefine2DISCOVARplusDovetail_5628:HG2_Ill_manta_4676:HG2_Ill_svaba_21519:HG2_PB_SVrefine2Falcon1plusDovetail_5222:HG2_PB_SVrefine2PB10Xhap12_12665:HG2_PB_SVrefine2PBcRplusDovetail_4784:HG2_PB_pbsv_17440:HG3_10X_allpass_3307:HG3_Ill_GATKHCSBGrefine_11353:HG3_Ill_SVrefine2DISCOVARDovetail_12418:HG3_Ill_manta_3826:HG3_Ill_scalpel_16612:HG3_Ill_svaba_21716:HG3_PB_SVrefine2Falcon1Dovetail_10775:HG3_PB_SVrefine2PBcRDovetail_8462:HG3_PB_pbsv_17112:HG4_10X_allpass_3154:HG4_Ill_GATKHCSBGrefine_11809:HG4_Ill_SVrefine2DISCOVARDovetail_12183:HG4_Ill_manta_3965:HG4_Ill_scalpel_15865:HG4_Ill_svaba_21446:HG4_PB_SVrefine2Falcon1Dovetail_10792:HG4_PB_SVrefine2PBcRDovetail_8722:HG4_PB_pbsv_17341;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0898502;ClusterMaxSizeDiff=0.0898502;ClusterMaxEditDist=0.0898502;PBcalls=17;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=14;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-306;DistBack=2254;DistForward=1123;DistMin=1123;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=18:55671123-55671442;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1638.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:70:1/1:2:17:2:42:1/1:0:37:0:26:1/1:0:36:./.:2:12:.:.:.
chr18	55801577	HG3_PB_HySA_26269	AGCAATTCCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12106:HG2_10X_allpass_2688:HG2_PB_assemblyticsPBcR_11288:HG4_PB_assemblyticsfalcon_11463:HG3_PB_assemblyticsfalcon_11648:HG2_PB_assemblyticsfalcon_11661:HG4_PB_HySA_25364:HG2_PB_HySA_31727:HG3_PB_pbsv_17113:HG4_PB_pbsv_17343:HG4_Ill_MetaSV_2221:HG3_Ill_MetaSV_2295:HG2_Ill_tnscope_1861:HG2_Ill_MetaSV_2153:HG4_PB_SVrefine2PBcRDovetail_8723:HG4_PB_SVrefine2Falcon1Dovetail_10793:HG4_Ill_scalpel_15867:HG4_Ill_manta_3966:HG4_Ill_SVrefine2DISCOVARDovetail_12185:HG4_Ill_GATKHCSBGrefine_11811:HG4_10X_allpass_3155:HG3_PB_SVrefine2PBcRDovetail_8463:HG3_PB_SVrefine2Falcon1Dovetail_10776:HG3_PB_HySA_26269:HG3_Ill_manta_3827:HG3_Ill_SVrefine2DISCOVARDovetail_12419:HG3_Ill_GATKHCSBGrefine_11355:HG3_10X_allpass_3308:HG2_PB_pbsv_17442:HG2_PB_SVrefine2PBcRplusDovetail_4785:HG2_PB_SVrefine2PB10Xhap12_12666:HG2_PB_SVrefine2Falcon1plusDovetail_5223:HG2_Ill_scalpel_16268:HG2_Ill_manta_4677:HG2_Ill_breakscan11_2498:HG2_Ill_SVrefine2DISCOVARplusDovetail_5630:HG2_Ill_GATKHCSBGrefine_11453;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12106:HG4_PB_SVrefine2PBcRDovetail_8723:HG4_PB_SVrefine2Falcon1Dovetail_10793:HG4_Ill_scalpel_15867:HG4_Ill_manta_3966:HG4_Ill_SVrefine2DISCOVARDovetail_12185:HG4_Ill_GATKHCSBGrefine_11811:HG4_10X_allpass_3155:HG3_PB_SVrefine2PBcRDovetail_8463:HG3_PB_SVrefine2Falcon1Dovetail_10776:HG3_PB_HySA_26269:HG3_Ill_manta_3827:HG3_Ill_SVrefine2DISCOVARDovetail_12419:HG3_Ill_GATKHCSBGrefine_11355:HG3_10X_allpass_3308:HG2_PB_pbsv_17442:HG2_PB_SVrefine2PBcRplusDovetail_4785:HG2_PB_SVrefine2PB10Xhap12_12666:HG2_PB_SVrefine2Falcon1plusDovetail_5223:HG2_Ill_scalpel_16268:HG2_Ill_manta_4677:HG2_Ill_breakscan11_2498:HG2_Ill_SVrefine2DISCOVARplusDovetail_5630:HG2_Ill_GATKHCSBGrefine_11453;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0936037;ClusterMaxSizeDiff=0.0936037;ClusterMaxEditDist=0.0936037;PBcalls=17;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=57184;DistForward=16953;DistMin=16953;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=18:55801578-55801918;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1639.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:45:1/1:0:10:0:5:1/1:0:22:0:11:1/1:0:42:0/1:3:17:.:.:.
chr18	56112307	HG2_Ill_GATKHC_27588	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGA	G	20	PASS	ClusterIDs=HG4_Ill_Krunchall_23690:HG3_Ill_scalpel_16615:HG3_PB_HySA_26271:HG3_Ill_GATKHC_27449:HG3_Ill_GATKHCSBGrefine_11358:HG2_Ill_GATKHC_27588:HG2_Ill_GATKHCSBGrefine_11454:HG2_Ill_manta_4678:HG3_Ill_scalpel_16616:HG2_Ill_scalpel_16270:HG2_Ill_Krunchall_23359:HG3_Ill_Krunchall_22938:HG4_Ill_scalpel_15869;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11454:HG2_Ill_GATKHC_27588:HG3_Ill_GATKHCSBGrefine_11358:HG3_Ill_GATKHC_27449;NumExactMatchSVs=4;ClusterMaxShiftDist=0.372549;ClusterMaxSizeDiff=0.372549;ClusterMaxEditDist=0.372549;PBcalls=1;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=-49;DistForward=-23;DistMin=-49;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=64;REFWIDENED=18:56112257-56112374;PctSeqSimilarity=0.9565;PctSizeSimilarity=0.9474;PctRecOverlap=0.8448;SizeDiff=-3;StartDistance=9;EndDistance=6;GTMatch=0;TruScore=91;MatchId=1640.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:0|1:25:6:6:30:./.:7:8:23:0:0/1:19:4:./.:.:.:.:.:.
chr18	56127339	HG4_Ill_GATKHCSBGrefine_11814	CTGTGTCTAGCTCAGGGTTTGTAAATATACCAATCAGCACTCTGTATCTAGCTAATCTAGTGGAGAACTTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12110:HG2_PB_pbsv_17447:HG3_PB_pbsv_17116:HG4_PB_pbsv_17347:HG2_PB_HySA_31736:HG3_PB_HySA_26272:HG4_Ill_svaba_21450:HG4_Ill_SVrefine2DISCOVARDovetail_12188:HG4_Ill_GATKHCSBGrefine_11814:HG4_Ill_250bpfermikitraw_22648:HG3_PB_SVrefine2PBcRDovetail_8466:HG3_PB_SVrefine2Falcon1Dovetail_10780:HG3_Ill_svaba_21722:HG3_Ill_SVrefine2DISCOVARDovetail_12420:HG3_Ill_GATKHCSBGrefine_11360:HG3_Ill_250bpfermikitraw_22347:HG3_Ill_150bpfermikitraw_21714:HG2_Ill_svaba_21524:HG2_Ill_SVrefine2DISCOVARplusDovetail_5633:HG2_Ill_GATKHCSBGrefine_11455:HG2_Ill_250bpfermikitraw_23021;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12110:HG4_Ill_svaba_21450:HG4_Ill_SVrefine2DISCOVARDovetail_12188:HG4_Ill_GATKHCSBGrefine_11814:HG4_Ill_250bpfermikitraw_22648:HG3_PB_SVrefine2PBcRDovetail_8466:HG3_PB_SVrefine2Falcon1Dovetail_10780:HG3_Ill_svaba_21722:HG3_Ill_SVrefine2DISCOVARDovetail_12420:HG3_Ill_GATKHCSBGrefine_11360:HG3_Ill_250bpfermikitraw_22347:HG3_Ill_150bpfermikitraw_21714:HG2_Ill_svaba_21524:HG2_Ill_SVrefine2DISCOVARplusDovetail_5633:HG2_Ill_GATKHCSBGrefine_11455:HG2_Ill_250bpfermikitraw_23021;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0425532;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.0431655;PBcalls=7;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=9;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-70;DistBack=14977;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=114;REFWIDENED=18:56127340-56127523;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1641.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:27:0|1:34:4:4:23:./.:0:3:14:1:0/1:18:16:./.:.:.:.:.:.
chr18	57482739	HG4_Ill_250bpfermikitraw_22663	GGAAATACTTTAAGCACAATAAATCTTCACTTTCCAAATAAGAAAGCCTGCAGAGAATATCCAAAAACTATTAAATATAAATCAGTAGTATAGGAAAATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12114:HG2_PB_HySA_31765:HG2_PB_pbsv_17460:HG4_PB_pbsv_17359:HG4_PB_SVrefine2PBcRDovetail_8732:HG4_PB_HySA_25383:HG4_Ill_SVrefine2DISCOVARDovetail_12199:HG4_Ill_Krunchall_23705:HG4_Ill_250bpfermikitraw_22663:HG2_PB_SVrefine2PBcRplusDovetail_4794:HG2_PB_SVrefine2PB10Xhap12_12676:HG2_Ill_SVrefine2DISCOVARplusDovetail_5640:HG2_Ill_Krunchall_23370:HG2_Ill_GATKHCSBGrefine_11461:HG2_Ill_250bpfermikitraw_23035;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12114:HG4_PB_SVrefine2PBcRDovetail_8732:HG4_PB_HySA_25383:HG4_Ill_SVrefine2DISCOVARDovetail_12199:HG4_Ill_Krunchall_23705:HG4_Ill_250bpfermikitraw_22663:HG2_PB_SVrefine2PBcRplusDovetail_4794:HG2_PB_SVrefine2PB10Xhap12_12676:HG2_Ill_SVrefine2DISCOVARplusDovetail_5640:HG2_Ill_Krunchall_23370:HG2_Ill_GATKHCSBGrefine_11461:HG2_Ill_250bpfermikitraw_23035;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0204082;ClusterMaxSizeDiff=0.020202;ClusterMaxEditDist=0.0408163;PBcalls=7;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-99;DistBack=26359;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=101;REFWIDENED=18:57482740-57482939;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1642.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:0|1:23:0:1:22:0|1:41:0:0:10:0/1:39:25:./.:.:.:.:.:.
chr18	59283862	HG2_PB_SVrefine2Falcon1plusDovetail_5236	TAAAGATAAAAATCTCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_11680:HG2_PB_PB10Xdip_14241:HG2_PB_HySA_31778:HG2_PB_assemblyticsPBcR_11320:HG4_Ill_Krunchall_23720:HG2_Ill_Krunchall_23387:HG4_PB_assemblyticsfalcon_11491:HG2_PB_assemblyticsfalcon_11696:HG2_PB_SVrefine2PB10Xhap12_12680:HG2_Ill_MetaSV_2161:HG4_PB_pbsv_17363:HG4_PB_SVrefine2Falcon1Dovetail_10810:HG4_Ill_scalpel_15889:HG4_Ill_manta_3971:HG4_Ill_SVrefine2DISCOVARDovetail_12203:HG4_Ill_MetaSV_2228:HG4_Ill_GATKHCSBGrefine_11825:HG3_Ill_SVrefine2DISCOVARDovetail_12433:HG3_Ill_GATKHCSBGrefine_11368:HG3_10X_allpass_3310:HG2_PB_pbsv_17464:HG2_PB_SVrefine2PBcRplusDovetail_4797:HG2_PB_SVrefine2PB10Xhap12_12679:HG2_PB_SVrefine2Falcon1plusDovetail_5236:HG2_Ill_scalpel_16290:HG2_Ill_manta_4682:HG2_Ill_GATKHCSBGrefine_11462:HG2_10X_SVrefine210Xhap12_12120:HG2_Ill_breakscan11_2500:HG4_Ill_Spiral_1354:HG3_Ill_Spiral_17827:HG2_Ill_Spiral_1144:HG3_PB_SVrefine2Falcon1Dovetail_10793;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12120:HG2_Ill_GATKHCSBGrefine_11462:HG2_Ill_manta_4682:HG2_Ill_scalpel_16290:HG2_PB_SVrefine2Falcon1plusDovetail_5236:HG2_PB_SVrefine2PB10Xhap12_12679:HG2_PB_SVrefine2PBcRplusDovetail_4797:HG2_PB_pbsv_17464:HG3_10X_allpass_3310:HG3_Ill_GATKHCSBGrefine_11368:HG3_Ill_SVrefine2DISCOVARDovetail_12433:HG4_Ill_GATKHCSBGrefine_11825:HG4_Ill_MetaSV_2228:HG4_Ill_SVrefine2DISCOVARDovetail_12203:HG4_Ill_manta_3971:HG4_Ill_scalpel_15889:HG4_PB_SVrefine2Falcon1Dovetail_10810:HG4_PB_pbsv_17363;NumExactMatchSVs=18;ClusterMaxShiftDist=0.108225;ClusterMaxSizeDiff=0.108225;ClusterMaxEditDist=0.245614;PBcalls=14;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=6;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-236;DistBack=14391;DistForward=22648;DistMin=14391;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=18:59283863-59284111;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1643.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:37:./.:15:13:8:18:0|1:30:0:0:23:0/1:23:23:./.:.:.:.:.:.
chr18	59792336	HG4_Ill_scalpel_15892	CGTTTGTACATATGTGTATATAAATATACACGTTTGTACATATGTGTATATACAT	C	20	PASS	ClusterIDs=HG4_PB_HySA_25394:HG2_PB_HySA_31797:HG3_PB_pbsv_17135:HG2_PB_pbsv_17470:HG2_Ill_SpiralSDKrefine_7413:HG2_Ill_manta_4684:HG2_PB_assemblyticsPBcR_11330:HG4_PB_assemblyticsfalcon_11499:HG2_PB_assemblyticsfalcon_11704:HG3_PB_assemblyticsfalcon_11692:HG2_PB_HySA_31796:HG4_PB_pbsv_17368:HG4_Ill_svaba_21493:HG4_Ill_scalpel_15892:HG4_Ill_Krunchall_23729:HG4_Ill_250bpfermikitraw_22683:HG3_Ill_svaba_21767:HG3_Ill_scalpel_16642:HG3_Ill_Krunchall_22975:HG3_Ill_250bpfermikitraw_22380:HG3_Ill_150bpfermikitraw_21748:HG2_Ill_svaba_21565:HG2_Ill_scalpel_16296:HG2_Ill_Krunchall_23394:HG2_Ill_250bpfermikitraw_23053:HG2_Ill_150bpfermikitraw_21730;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21730:HG2_Ill_250bpfermikitraw_23053:HG2_Ill_Krunchall_23394:HG2_Ill_scalpel_16296:HG2_Ill_svaba_21565:HG3_Ill_150bpfermikitraw_21748:HG3_Ill_250bpfermikitraw_22380:HG3_Ill_Krunchall_22975:HG3_Ill_scalpel_16642:HG3_Ill_svaba_21767:HG4_Ill_250bpfermikitraw_22683:HG4_Ill_Krunchall_23729:HG4_Ill_scalpel_15892:HG4_Ill_svaba_21493:HG4_PB_pbsv_17368;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0934579;ClusterMaxSizeDiff=0.0934579;ClusterMaxEditDist=0.133333;PBcalls=10;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=61642;DistForward=-27;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=172;REFWIDENED=18:59792274-59792499;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1645.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:66:./.:0:5:0:2:1/1:0:11:0:9:1/1:1:60:./.:.:.:.:.:.
chr18	62056711	HG3_Ill_150bpfermikitraw_21769	CTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	C	20	PASS	ClusterIDs=HG4_PB_pbsv_17379:HG4_PB_HySA_25416:HG3_PB_HySA_26342:HG2_PB_HySA_31828:HG4_Ill_manta_3975:HG3_Ill_manta_3836:HG2_Ill_manta_4687:HG4_Ill_150bpfermikitraw_21842:HG3_Ill_Krunchall_22997:HG3_Ill_250bpfermikitraw_22401:HG3_Ill_150bpfermikitraw_21769:HG3_10X_allpass_3313:HG2_Ill_Krunchall_23414:HG2_Ill_250bpfermikitraw_23075:HG2_Ill_150bpfermikitraw_21752:HG2_PB_pbsv_17480:HG3_PB_pbsv_17147;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21752:HG2_Ill_250bpfermikitraw_23075:HG2_Ill_Krunchall_23414:HG3_10X_allpass_3313:HG3_Ill_150bpfermikitraw_21769:HG3_Ill_250bpfermikitraw_22401:HG3_Ill_Krunchall_22997:HG4_Ill_150bpfermikitraw_21842;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.0869565;PBcalls=6;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-82;DistBack=25967;DistForward=-78;DistMin=-78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=82;REFWIDENED=18:62056712-62056875;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9878;PctRecOverlap=0.9759;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=98;MatchId=1646.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:67:./.:3:4:2:55:./.:0:22:0:0:1/1:0:34:./.:.:.:.:.:.
chr18	62489951	HG4_Ill_GATKHC_27606	CTATCTATATAGAAAGATAGATAGCAAAGGCCGATAATTTTATTGTATTCAATTTTTCTTTCTATATCTGTCTTTGTATTCGAGTGGCTAATTCCTATTAATGTAATGATTAGA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_17387:HG2_Ill_Krunchall_23418:HG4_Ill_Krunchall_23754:HG2_PB_assemblyticsPBcR_11355:HG2_PB_HySA_31834:HG4_PB_SVrefine2PBcRDovetail_8745:HG4_Ill_svaba_21517:HG4_Ill_manta_3976:HG4_Ill_SVrefine2DISCOVARDovetail_12214:HG4_Ill_GATKHC_27606:HG4_Ill_GATKHCSBGrefine_11848:HG4_10X_allpass_3157:HG2_PB_SVrefine2PBcRplusDovetail_4813:HG2_PB_SVrefine2PB10Xhap12_12696:HG2_Ill_svaba_21591:HG2_Ill_manta_4688:HG2_Ill_breakscan11_2501:HG2_Ill_SpiralSDKrefine_7432:HG2_Ill_GATKHC_27666:HG2_Ill_GATKHCSBGrefine_11485:HG2_10X_allpass_2690:HG2_10X_SVrefine210Xhap12_12134:HG2_PB_pbsv_17484;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12134:HG2_10X_allpass_2690:HG2_Ill_GATKHCSBGrefine_11485:HG2_Ill_GATKHC_27666:HG2_Ill_SpiralSDKrefine_7432:HG2_Ill_breakscan11_2501:HG2_Ill_manta_4688:HG2_Ill_svaba_21591:HG2_PB_SVrefine2PB10Xhap12_12696:HG2_PB_SVrefine2PBcRplusDovetail_4813:HG4_10X_allpass_3157:HG4_Ill_GATKHCSBGrefine_11848:HG4_Ill_GATKHC_27606:HG4_Ill_SVrefine2DISCOVARDovetail_12214:HG4_Ill_manta_3976:HG4_Ill_svaba_21517:HG4_PB_SVrefine2PBcRDovetail_8745;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0264317;ClusterMaxSizeDiff=0.0264317;ClusterMaxEditDist=0.0353982;PBcalls=7;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-113;DistBack=-62;DistForward=34079;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=18:62489952-62490066;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1647.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:26:0|1:17:1:5:25:0|1:53:0:0:29:0/1:35:24:./.:.:.:.:.:.
chr18	62996845	HG3_Ill_GATKHC_27534	AAAACATTAAATCTGAATGGCAATGCTATTTCACATCTTCTGTGGCTTTTCCACAAGTGGTGTGTAATTTATTTAGCTTTCT	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_11730:HG2_PB_pbsv_17487:HG4_PB_assemblyticsfalcon_11531:HG3_Ill_svaba_21805:HG3_Ill_scalpel_16661:HG3_Ill_manta_3840:HG3_Ill_GATKHC_27534:HG3_Ill_GATKHCSBGrefine_11395:HG3_Ill_Cortex_1603:HG3_Ill_250bpfermikitraw_22415:HG3_Ill_150bpfermikitraw_21783:HG3_CG_vcfBeta_9380:HG3_10X_allpass_3314:HG2_Ill_svaba_21598:HG2_Ill_scalpel_16313:HG2_Ill_manta_4691:HG2_Ill_breakscan11_2502:HG2_Ill_SpiralSDKrefine_7437:HG2_Ill_GATKHC_27675:HG2_Ill_GATKHCSBGrefine_11488:HG2_Ill_Cortex_3765:HG2_Ill_250bpfermikitraw_23085:HG2_Ill_150bpfermikitraw_21765:HG2_CG_vcfBeta_9892:HG2_10X_allpass_2691:HG3_Ill_Krunchall_23011:HG2_Ill_Krunchall_23424:HG3_PB_HySA_26354:HG2_Ill_Spiral_1146:HG3_PB_pbsv_17154;NumClusterSVs=30;ExactMatchIDs=HG2_10X_allpass_2691:HG2_CG_vcfBeta_9892:HG2_Ill_150bpfermikitraw_21765:HG2_Ill_250bpfermikitraw_23085:HG2_Ill_Cortex_3765:HG2_Ill_GATKHCSBGrefine_11488:HG2_Ill_GATKHC_27675:HG2_Ill_SpiralSDKrefine_7437:HG2_Ill_breakscan11_2502:HG2_Ill_manta_4691:HG2_Ill_scalpel_16313:HG2_Ill_svaba_21598:HG3_10X_allpass_3314:HG3_CG_vcfBeta_9380:HG3_Ill_150bpfermikitraw_21783:HG3_Ill_250bpfermikitraw_22415:HG3_Ill_Cortex_1603:HG3_Ill_GATKHCSBGrefine_11395:HG3_Ill_GATKHC_27534:HG3_Ill_manta_3840:HG3_Ill_scalpel_16661:HG3_Ill_svaba_21805:HG4_PB_assemblyticsfalcon_11531;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0493827;ClusterMaxSizeDiff=0.0493827;ClusterMaxEditDist=0.0496894;PBcalls=5;Illcalls=21;TenXcalls=2;CGcalls=2;PBexactcalls=1;Illexactcalls=18;TenXexactcalls=2;CGexactcalls=2;HG2count=15;HG3count=14;HG4count=1;NumTechs=4;NumTechsExact=4;SVLEN=-81;DistBack=63840;DistForward=46987;DistMin=46987;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=18:62996844-62996928;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1648.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:20:0|1:27:2:4:16:1|0:0:14:38:1:0/1:29:27:./.:.:.:.:.:.
chr18	63533238	HG2_PB_pbsv_17489	TAAGAATGAAACTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1147:HG4_10X_allpass_3158:HG2_10X_allpass_2692:HG4_Ill_MetaSV_2236:HG4_PB_HySA_25430:HG4_Ill_Spiral_1356:HG3_Ill_Spiral_17867:HG3_PB_pbsv_17157:HG3_PB_assemblyticsfalcon_11733:HG4_PB_assemblyticsfalcon_11536:HG2_PB_assemblyticsfalcon_11734:HG2_PB_assemblyticsPBcR_11363:HG4_PB_pbsv_17391:HG2_PB_HySA_31844:HG3_Ill_MetaSV_2308:HG2_Ill_tnscope_1862:HG2_Ill_MetaSV_2172:HG4_PB_SVrefine2PBcRDovetail_8749:HG4_PB_SVrefine2Falcon1Dovetail_10828:HG4_Ill_SVrefine2DISCOVARDovetail_12221:HG4_Ill_Krunchall_23765:HG4_Ill_GATKHCSBGrefine_11851:HG3_PB_SVrefine2PBcRDovetail_8494:HG3_PB_SVrefine2Falcon1Dovetail_10811:HG3_Ill_scalpel_16666:HG3_Ill_SVrefine2DISCOVARDovetail_12452:HG3_Ill_GATKHCSBGrefine_11396:HG3_10X_allpass_3315:HG2_PB_pbsv_17489:HG2_PB_SVrefine2PBcRplusDovetail_4817:HG2_PB_SVrefine2PB10Xhap12_12701:HG2_PB_SVrefine2Falcon1plusDovetail_5256:HG2_Ill_manta_4692:HG2_Ill_breakscan11_2503:HG2_Ill_SVrefine2DISCOVARplusDovetail_5668:HG2_Ill_GATKHCSBGrefine_11489:HG2_10X_SVrefine210Xhap12_12138;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12138:HG2_Ill_GATKHCSBGrefine_11489:HG2_Ill_SVrefine2DISCOVARplusDovetail_5668:HG2_Ill_breakscan11_2503:HG2_Ill_manta_4692:HG2_PB_SVrefine2Falcon1plusDovetail_5256:HG2_PB_SVrefine2PB10Xhap12_12701:HG2_PB_SVrefine2PBcRplusDovetail_4817:HG2_PB_pbsv_17489:HG3_10X_allpass_3315:HG3_Ill_GATKHCSBGrefine_11396:HG3_Ill_SVrefine2DISCOVARDovetail_12452:HG3_Ill_scalpel_16666:HG3_PB_SVrefine2Falcon1Dovetail_10811:HG3_PB_SVrefine2PBcRDovetail_8494:HG4_Ill_GATKHCSBGrefine_11851:HG4_Ill_Krunchall_23765:HG4_Ill_SVrefine2DISCOVARDovetail_12221:HG4_PB_SVrefine2Falcon1Dovetail_10828:HG4_PB_SVrefine2PBcRDovetail_8749;NumExactMatchSVs=20;ClusterMaxShiftDist=0.154728;ClusterMaxSizeDiff=0.154728;ClusterMaxEditDist=0.154728;PBcalls=16;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-344;DistBack=-675;DistForward=-329;DistMin=-675;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=18:63533239-63533598;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1649.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:77:1/1:0:16:1:26:./.:0:12:0:0:1/1:0:40:./.:2:13:.:.:.
chr18	64339234	HG3_Ill_SVrefine2DISCOVARDovetail_12459	TTTCTGGAGAAGATTAGCTAGCGGGCAGGTGGACTGAGTGGGGAAGATCTGCCCTTAGTGTGGGCAGACACTATCCAATCAGCTGGAGGCCTGAGTGAGGCCAAAAGGCAGAGGAGGAGAGAATTCTTGCTTTCTGTCTTCCAAAGCTGGGATGCCCTTCTTCTCTAGCCTTCGGATGTCAGAAATCCAGGTTCTGGGGTCTTTGGATTTATGGACTCCAGGACTCACACCAG	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1148:HG3_PB_HySA_26363:HG3_Ill_Krunchall_23024:HG2_Ill_Krunchall_23433:HG2_PB_assemblyticsPBcR_11367:HG2_PB_SVrefine2PBcRplusDovetail_4819:HG4_Ill_Cortex_1553:HG3_PB_pbsv_17161:HG3_Ill_svaba_21811:HG3_Ill_scalpel_16670:HG3_Ill_SVrefine2DISCOVARDovetail_12459:HG3_Ill_GATKHCSBGrefine_11401:HG3_Ill_Cortex_1604:HG2_PB_pbsv_17491:HG2_PB_SVrefine2PB10Xhap12_12703:HG2_PB_HySA_31850:HG2_Ill_svaba_21602:HG2_Ill_scalpel_16319:HG2_Ill_breakscan11_2504:HG2_Ill_SpiralSDKrefine_7440:HG2_Ill_SVrefine2DISCOVARplusDovetail_5671:HG2_Ill_MetaSV_2173:HG2_Ill_GATKHCSBGrefine_11491:HG2_Ill_Cortex_3768:HG2_10X_SVrefine210Xhap12_12139;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12139:HG2_Ill_Cortex_3768:HG2_Ill_GATKHCSBGrefine_11491:HG2_Ill_MetaSV_2173:HG2_Ill_SVrefine2DISCOVARplusDovetail_5671:HG2_Ill_SpiralSDKrefine_7440:HG2_Ill_breakscan11_2504:HG2_Ill_scalpel_16319:HG2_Ill_svaba_21602:HG2_PB_HySA_31850:HG2_PB_SVrefine2PB10Xhap12_12703:HG2_PB_pbsv_17491:HG3_Ill_Cortex_1604:HG3_Ill_GATKHCSBGrefine_11401:HG3_Ill_SVrefine2DISCOVARDovetail_12459:HG3_Ill_scalpel_16670:HG3_Ill_svaba_21811:HG3_PB_pbsv_17161:HG4_Ill_Cortex_1553;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0642398;ClusterMaxSizeDiff=0.0642398;ClusterMaxEditDist=0.0642398;PBcalls=7;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-232;DistBack=74;DistForward=-230;DistMin=-230;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=18:64339235-64339470;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1650.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:0|1:24:0:2:21:1|0:0:16:46:1:0/1:46:21:./.:.:.:.:.:.
chr18	65520684	HG2_Ill_150bpfermikitraw_21782	GTCTCTAGGAAGTTCCAAACTTTCCTACATCTTCCTGCCTTCTGAGCCCTCCAAA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21782:HG4_PB_HySA_25441:HG2_PB_HySA_31865:HG4_PB_pbsv_17403:HG4_Ill_svaba_21541:HG4_Ill_manta_3983:HG4_Ill_Krunchall_23790:HG4_Ill_GATKHC_27643:HG4_Ill_GATKHCSBGrefine_11862:HG4_Ill_250bpfermikitraw_22739:HG4_Ill_150bpfermikitraw_21880:HG2_PB_pbsv_17499:HG2_Ill_svaba_21611:HG2_Ill_manta_4695:HG2_Ill_Krunchall_23445:HG2_Ill_GATKHC_27695:HG2_Ill_GATKHCSBGrefine_11501:HG2_Ill_250bpfermikitraw_23105;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21782:HG4_PB_pbsv_17403:HG4_Ill_svaba_21541:HG4_Ill_manta_3983:HG4_Ill_Krunchall_23790:HG4_Ill_GATKHC_27643:HG4_Ill_GATKHCSBGrefine_11862:HG4_Ill_250bpfermikitraw_22739:HG4_Ill_150bpfermikitraw_21880:HG2_PB_pbsv_17499:HG2_Ill_svaba_21611:HG2_Ill_manta_4695:HG2_Ill_Krunchall_23445:HG2_Ill_GATKHC_27695:HG2_Ill_GATKHCSBGrefine_11501:HG2_Ill_250bpfermikitraw_23105;NumExactMatchSVs=16;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.018018;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=77122;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=57;REFWIDENED=18:65520685-65520795;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1651.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:0|1:24:2:5:22:./.:19:1:0:26:0/1:26:18:./.:.:.:.:.:.
chr18	66221318	HG2_Ill_manta_4698	TAAAAAGTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCGGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_11763:HG2_10X_allpass_2694:HG4_PB_assemblyticsfalcon_11562:HG2_PB_assemblyticsfalcon_11760:HG2_PB_assemblyticsPBcR_11389:HG3_PB_pbsv_17175:HG3_Ill_Krunchall_23049:HG2_Ill_Krunchall_23457:HG2_PB_SVrefine2PB10Xhap12_12715:HG2_PB_PB10Xdip_14268:HG2_PB_HySA_31876:HG3_PB_HySA_26392:HG3_Ill_Spiral_17890:HG3_Ill_MetaSV_2313:HG2_Ill_tnscope_1865:HG2_Ill_MetaSV_2177:HG4_PB_SVrefine2Falcon1Dovetail_10840:HG3_PB_SVrefine2PBcRDovetail_8505:HG3_Ill_scalpel_16689:HG3_Ill_manta_3846:HG3_Ill_GATKHCSBGrefine_11411:HG3_10X_allpass_3321:HG2_PB_pbsv_17505:HG2_PB_SVrefine2PBcRplusDovetail_4829:HG2_PB_SVrefine2PB10Xhap12_12714:HG2_PB_SVrefine2Falcon1plusDovetail_5267:HG2_Ill_scalpel_16334:HG2_Ill_manta_4698:HG2_Ill_breakscan11_2507:HG2_Ill_GATKHCSBGrefine_11505:HG2_10X_SVrefine210Xhap12_12151:HG2_Ill_Spiral_1150:HG3_PB_SVrefine2Falcon1Dovetail_10823;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12151:HG2_Ill_GATKHCSBGrefine_11505:HG2_Ill_breakscan11_2507:HG2_Ill_manta_4698:HG2_Ill_scalpel_16334:HG2_PB_SVrefine2Falcon1plusDovetail_5267:HG2_PB_SVrefine2PB10Xhap12_12714:HG2_PB_SVrefine2PBcRplusDovetail_4829:HG2_PB_pbsv_17505:HG3_10X_allpass_3321:HG3_Ill_GATKHCSBGrefine_11411:HG3_Ill_manta_3846:HG3_Ill_scalpel_16689:HG3_PB_SVrefine2PBcRDovetail_8505:HG4_PB_SVrefine2Falcon1Dovetail_10840;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0594679;ClusterMaxSizeDiff=0.0594679;ClusterMaxEditDist=0.182109;PBcalls=16;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-323;DistBack=15329;DistForward=-314;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=18:66221319-66221651;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1653.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:41:0|1:28:0:3:35:1|0:0:30:27:0:0/1:26:15:0/1:28:9:.:.:.
chr18	67283642	HG4_Ill_250bpfermikitraw_22767	CCTTCTCTAAGTCAACCAAGCAGATTTTTCCTAAGGTCAACCAAGCTCCAGAAAGCAACTTTAGAACTAACTACTAGATGTG	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23129:HG3_PB_assemblyticsfalcon_11777:HG4_PB_assemblyticsfalcon_11574:HG4_PB_pbsv_17413:HG2_PB_assemblyticsfalcon_11770:HG2_PB_HySA_31887:HG3_PB_pbsv_17183:HG2_Ill_breakscan11_2509:HG2_PB_pbsv_17510:HG4_PB_SVrefine2PBcRDovetail_8764:HG4_Ill_svaba_21568:HG4_Ill_scalpel_15944:HG4_Ill_manta_3986:HG4_Ill_SVrefine2DISCOVARDovetail_12237:HG4_Ill_Krunchall_23823:HG4_Ill_GATKHC_27669:HG4_Ill_GATKHCSBGrefine_11869:HG4_Ill_250bpfermikitraw_22767:HG4_Ill_150bpfermikitraw_21910:HG3_Ill_svaba_21843:HG3_Ill_manta_3850:HG3_Ill_Krunchall_23064:HG3_Ill_GATKHC_27585:HG3_Ill_GATKHCSBGrefine_11417:HG3_Ill_250bpfermikitraw_22467:HG2_PB_SVrefine2PBcRplusDovetail_4833:HG2_PB_SVrefine2PB10Xhap12_12719:HG2_Ill_svaba_21630:HG2_Ill_scalpel_16345:HG2_Ill_manta_4701:HG2_Ill_SpiralSDKrefine_7463:HG2_Ill_Krunchall_23471:HG2_Ill_GATKHC_27723:HG2_Ill_GATKHCSBGrefine_11511;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23129:HG4_PB_SVrefine2PBcRDovetail_8764:HG4_Ill_svaba_21568:HG4_Ill_scalpel_15944:HG4_Ill_manta_3986:HG4_Ill_SVrefine2DISCOVARDovetail_12237:HG4_Ill_Krunchall_23823:HG4_Ill_GATKHC_27669:HG4_Ill_GATKHCSBGrefine_11869:HG4_Ill_250bpfermikitraw_22767:HG4_Ill_150bpfermikitraw_21910:HG3_Ill_svaba_21843:HG3_Ill_manta_3850:HG3_Ill_Krunchall_23064:HG3_Ill_GATKHC_27585:HG3_Ill_GATKHCSBGrefine_11417:HG3_Ill_250bpfermikitraw_22467:HG2_PB_SVrefine2PBcRplusDovetail_4833:HG2_PB_SVrefine2PB10Xhap12_12719:HG2_Ill_svaba_21630:HG2_Ill_scalpel_16345:HG2_Ill_manta_4701:HG2_Ill_SpiralSDKrefine_7463:HG2_Ill_Krunchall_23471:HG2_Ill_GATKHC_27723:HG2_Ill_GATKHCSBGrefine_11511;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0368098;ClusterMaxSizeDiff=0.0368098;ClusterMaxEditDist=0.0625;PBcalls=10;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=23;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-81;DistBack=3783;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=82;REFWIDENED=18:67283643-67283805;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1654.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:22:0|1:25:1:1:21:0|1:15:0:0:17:0/1:25:23:./.:.:.:.:.:.
chr18	67949598	HG2_Ill_breakscan11_2511	TAAGAAATATTGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12158:HG4_Ill_Krunchall_23830:HG3_Ill_Krunchall_23073:HG4_PB_assemblyticsfalcon_11579:HG3_PB_assemblyticsfalcon_11782:HG4_PB_pbsv_17415:HG2_PB_pbsv_17514:HG3_PB_HySA_26408:HG2_Ill_tnscope_1866:HG4_PB_SVrefine2PBcRDovetail_8767:HG4_PB_SVrefine2Falcon1Dovetail_10847:HG4_Ill_scalpel_15950:HG4_Ill_manta_3987:HG4_Ill_SVrefine2DISCOVARDovetail_12243:HG4_Ill_MetaSV_2247:HG4_Ill_GATKHCSBGrefine_11870:HG4_10X_allpass_3164:HG3_PB_pbsv_17187:HG3_PB_SVrefine2PBcRDovetail_8510:HG3_PB_SVrefine2Falcon1Dovetail_10829:HG3_Ill_manta_3851:HG3_Ill_SVrefine2DISCOVARDovetail_12477:HG3_Ill_MetaSV_2317:HG3_Ill_GATKHCSBGrefine_11419:HG3_10X_allpass_3323:HG2_PB_SVrefine2PB10Xhap12_12722:HG2_PB_SVrefine2Falcon1plusDovetail_5272:HG2_Ill_scalpel_16352:HG2_Ill_manta_4702:HG2_Ill_breakscan11_2511:HG2_Ill_SVrefine2DISCOVARplusDovetail_5691:HG2_Ill_MetaSV_2180:HG2_Ill_GATKHCSBGrefine_11513:HG2_10X_allpass_2695;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12158:HG4_PB_SVrefine2PBcRDovetail_8767:HG4_PB_SVrefine2Falcon1Dovetail_10847:HG4_Ill_scalpel_15950:HG4_Ill_manta_3987:HG4_Ill_SVrefine2DISCOVARDovetail_12243:HG4_Ill_MetaSV_2247:HG4_Ill_GATKHCSBGrefine_11870:HG4_10X_allpass_3164:HG3_PB_pbsv_17187:HG3_PB_SVrefine2PBcRDovetail_8510:HG3_PB_SVrefine2Falcon1Dovetail_10829:HG3_Ill_manta_3851:HG3_Ill_SVrefine2DISCOVARDovetail_12477:HG3_Ill_MetaSV_2317:HG3_Ill_GATKHCSBGrefine_11419:HG3_10X_allpass_3323:HG2_PB_SVrefine2PB10Xhap12_12722:HG2_PB_SVrefine2Falcon1plusDovetail_5272:HG2_Ill_scalpel_16352:HG2_Ill_manta_4702:HG2_Ill_breakscan11_2511:HG2_Ill_SVrefine2DISCOVARplusDovetail_5691:HG2_Ill_MetaSV_2180:HG2_Ill_GATKHCSBGrefine_11513:HG2_10X_allpass_2695;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0716511;ClusterMaxSizeDiff=0.0716511;ClusterMaxEditDist=0.0716511;PBcalls=12;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=15;TenXexactcalls=4;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-301;DistForward=-321;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=18:67949599-67949935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1655.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:44:0|1:35:10:4:30:0|1:34:0:0:15:0/1:26:13:0/1:13:5:.:.:.
chr18	68846724	HG2_PB_SVrefine2Falcon1plusDovetail_5277	TAGAAAAATAGCAAGGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_17421:HG2_10X_allpass_2696:HG3_PB_HySA_26412:HG2_PB_assemblyticsfalcon_11783:HG2_PB_assemblyticsPBcR_11410:HG4_PB_HySA_25470:HG2_PB_HySA_31898:HG4_Ill_Krunchall_23839:HG3_Ill_Krunchall_23080:HG2_Ill_Krunchall_23483:HG4_PB_assemblyticsfalcon_11586:HG3_PB_assemblyticsfalcon_11787:HG3_PB_pbsv_17192:HG2_PB_pbsv_17518:HG4_Ill_MetaSV_2250:HG3_Ill_MetaSV_2318:HG2_Ill_tnscope_1867:HG2_Ill_MetaSV_2181:HG4_PB_SVrefine2PBcRDovetail_8771:HG4_PB_SVrefine2Falcon1Dovetail_10853:HG4_Ill_svaba_21580:HG4_Ill_scalpel_15955:HG4_Ill_manta_3988:HG4_Ill_SVrefine2DISCOVARDovetail_12245:HG4_Ill_GATKHCSBGrefine_11873:HG4_10X_allpass_3165:HG3_PB_SVrefine2PBcRDovetail_8513:HG3_PB_SVrefine2Falcon1Dovetail_10833:HG3_Ill_svaba_21851:HG3_Ill_scalpel_16707:HG3_Ill_manta_3854:HG3_Ill_SVrefine2DISCOVARDovetail_12480:HG3_Ill_GATKHCSBGrefine_11421:HG3_10X_allpass_3324:HG2_PB_SVrefine2PBcRplusDovetail_4838:HG2_PB_SVrefine2PB10Xhap12_12726:HG2_PB_SVrefine2Falcon1plusDovetail_5277:HG2_Ill_svaba_21638:HG2_Ill_scalpel_16355:HG2_Ill_manta_4703:HG2_Ill_breakscan11_2512:HG2_Ill_SVrefine2DISCOVARplusDovetail_5695:HG2_Ill_GATKHCSBGrefine_11515:HG2_10X_SVrefine210Xhap12_12161;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12161:HG2_Ill_GATKHCSBGrefine_11515:HG2_Ill_SVrefine2DISCOVARplusDovetail_5695:HG2_Ill_breakscan11_2512:HG2_Ill_manta_4703:HG2_Ill_scalpel_16355:HG2_Ill_svaba_21638:HG2_PB_SVrefine2Falcon1plusDovetail_5277:HG2_PB_SVrefine2PB10Xhap12_12726:HG2_PB_SVrefine2PBcRplusDovetail_4838:HG3_10X_allpass_3324:HG3_Ill_GATKHCSBGrefine_11421:HG3_Ill_SVrefine2DISCOVARDovetail_12480:HG3_Ill_manta_3854:HG3_Ill_scalpel_16707:HG3_Ill_svaba_21851:HG3_PB_SVrefine2Falcon1Dovetail_10833:HG3_PB_SVrefine2PBcRDovetail_8513:HG4_10X_allpass_3165:HG4_Ill_GATKHCSBGrefine_11873:HG4_Ill_SVrefine2DISCOVARDovetail_12245:HG4_Ill_manta_3988:HG4_Ill_scalpel_15955:HG4_Ill_svaba_21580:HG4_PB_SVrefine2Falcon1Dovetail_10853:HG4_PB_SVrefine2PBcRDovetail_8771;NumExactMatchSVs=26;ClusterMaxShiftDist=0.100917;ClusterMaxSizeDiff=0.100917;ClusterMaxEditDist=0.100917;PBcalls=17;Illcalls=23;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-334;DistBack=5049;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=18:68846725-68847075;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1656.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:82:1/1:1:9:1:23:1/1:0:27:0:22:1/1:0:41:./.:1:10:.:.:.
chr18	69078395	HG2_PB_assemblyticsfalcon_11784	CAGCTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGATGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAATAAACATACGTGTGCATGTGTCTTTATAACAGCATGATTTATAATCCTTTGGGTATATACCCGGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCACCACACTGACTTCCACAATGGTTGAACTGGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCATCTGTTGTTTCCTGACGTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGTGAGCATTTTTTCATGTGTTTTTCGGCTGCATAAATGTCTTCTTTTGAGAAGTTTCTGTTCATATCCTTCGCCCATTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTTTGTATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATGTTCTCCCATTCTGTAGGTTGCCTGTTCACTC	AATTTCATCA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2319:HG3_PB_pbsv_17194:HG4_Ill_GATKHCSBGrefine_11878:HG3_Ill_GATKHCSBGrefine_11425:HG2_Ill_GATKHCSBGrefine_11519:HG4_PB_HySA_25473:HG3_PB_HySA_26417:HG2_PB_HySA_31906:HG2_Ill_tnscope_1868:HG4_PB_SVrefine2PBcRDovetail_8772:HG4_PB_SVrefine2Falcon1Dovetail_10854:HG4_Ill_SVrefine2DISCOVARDovetail_12246:HG3_PB_SVrefine2PBcRDovetail_8514:HG3_PB_SVrefine2Falcon1Dovetail_10834:HG3_Ill_SVrefine2DISCOVARDovetail_12483:HG2_PB_assemblyticsfalcon_11784:HG2_PB_assemblyticsPBcR_11413:HG2_PB_SVrefine2PBcRplusDovetail_4839:HG2_PB_SVrefine2PB10Xhap12_12727:HG2_PB_SVrefine2Falcon1plusDovetail_5278:HG2_PB_PB10Xdip_14283:HG2_Ill_SVrefine2DISCOVARplusDovetail_5696:HG2_10X_SVrefine210Xhap12_12163:HG4_Ill_MetaSV_2252:HG2_Ill_MetaSV_2182:HG4_PB_assemblyticsfalcon_11587:HG3_PB_assemblyticsfalcon_11789:HG4_PB_pbsv_17423:HG4_10X_allpass_3166:HG2_PB_pbsv_17520;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12163:HG2_Ill_SVrefine2DISCOVARplusDovetail_5696:HG2_PB_PB10Xdip_14283:HG2_PB_SVrefine2Falcon1plusDovetail_5278:HG2_PB_SVrefine2PB10Xhap12_12727:HG2_PB_SVrefine2PBcRplusDovetail_4839:HG2_PB_assemblyticsPBcR_11413:HG2_PB_assemblyticsfalcon_11784:HG3_Ill_SVrefine2DISCOVARDovetail_12483:HG3_PB_SVrefine2Falcon1Dovetail_10834:HG3_PB_SVrefine2PBcRDovetail_8514:HG4_Ill_SVrefine2DISCOVARDovetail_12246:HG4_PB_SVrefine2Falcon1Dovetail_10854:HG4_PB_SVrefine2PBcRDovetail_8772;NumExactMatchSVs=14;ClusterMaxShiftDist=0.216259;ClusterMaxSizeDiff=0.216259;ClusterMaxEditDist=0.216259;PBcalls=18;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-658;DistBack=-20;DistForward=-646;DistMin=-646;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:69078395-69079062;PctSeqSimilarity=0.9917;PctSizeSimilarity=0.997;PctRecOverlap=0.9835;SizeDiff=2;StartDistance=-11;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1657.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:92:1/1:0:22:0:38:1/1:0:10:0:8:1/1:0:23:./.:3:35:.:.:.
chr18	69896769	HG2_PB_SVrefine2Falcon1plusDovetail_5281	CTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCACTAATTGACTCTT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_17525:HG3_PB_assemblyticsfalcon_11796:HG3_Ill_Krunchall_23094:HG2_PB_assemblyticsPBcR_11418:HG2_PB_assemblyticsfalcon_11790:HG3_Ill_Krunchall_23093:HG2_Ill_Krunchall_23494:HG2_10X_allpass_2697:HG4_PB_SVrefine2Falcon1Dovetail_10856:HG4_PB_assemblyticsfalcon_11595:HG3_PB_HySA_26428:HG2_Ill_tnscope_1869:HG2_Ill_MetaSV_2183:HG3_PB_SVrefine2PBcRDovetail_8517:HG3_Ill_scalpel_16713:HG3_Ill_GATKHCSBGrefine_11429:HG3_10X_allpass_3326:HG2_PB_SVrefine2PBcRplusDovetail_4842:HG2_PB_SVrefine2Falcon1plusDovetail_5281:HG2_Ill_scalpel_16358:HG2_Ill_manta_4706:HG2_Ill_breakscan11_2513:HG2_Ill_GATKHCSBGrefine_11522:HG3_PB_pbsv_17201:HG3_Ill_MetaSV_2321:HG3_PB_SVrefine2Falcon1Dovetail_10836:HG3_Ill_scalpel_16712:HG3_Ill_manta_3858:HG3_Ill_SVrefine2DISCOVARDovetail_12488:HG3_Ill_GATKHCSBGrefine_11428;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11522:HG2_Ill_breakscan11_2513:HG2_Ill_manta_4706:HG2_Ill_scalpel_16358:HG2_PB_SVrefine2Falcon1plusDovetail_5281:HG2_PB_SVrefine2PBcRplusDovetail_4842:HG3_10X_allpass_3326:HG3_Ill_GATKHCSBGrefine_11429:HG3_Ill_scalpel_16713:HG3_PB_SVrefine2PBcRDovetail_8517;NumExactMatchSVs=10;ClusterMaxShiftDist=0.165584;ClusterMaxSizeDiff=0.165584;ClusterMaxEditDist=0.165584;PBcalls=12;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=15;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=27170;DistForward=-295;DistMin=-295;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=18:69896770-69897090;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1658.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:45:./.:15:14:12:16:1|0:0:33:35:0:0/1:33:26:0/1:16:4:.:.:.
chr18	70323316	HG2_PB_SVrefine2PB10Xhap12_12731	CCCTAGGGCTTCAGCATCCTCTGTTTCTCTGAATGAACCCTAGGGCTTCAGCATCCTCTGTTTCTCTGAATGAA	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_21826:HG2_PB_pbsv_17527:HG4_PB_pbsv_17425:HG3_PB_pbsv_17203:HG4_PB_SVrefine2Falcon1Dovetail_10857:HG4_Ill_SVrefine2DISCOVARDovetail_12250:HG3_PB_SVrefine2PBcRDovetail_8518:HG3_PB_SVrefine2Falcon1Dovetail_10838:HG3_PB_HySA_26433:HG3_Ill_SVrefine2DISCOVARDovetail_12490:HG3_Ill_250bpfermikitraw_22501:HG3_Ill_150bpfermikitraw_21855:HG2_PB_SVrefine2PBcRplusDovetail_4843:HG2_PB_SVrefine2PB10Xhap12_12731:HG2_PB_SVrefine2Falcon1plusDovetail_5283:HG2_Ill_SpiralSDKrefine_7472:HG2_Ill_SVrefine2DISCOVARplusDovetail_5698:HG2_Ill_250bpfermikitraw_23158;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_21826:HG4_PB_SVrefine2Falcon1Dovetail_10857:HG4_Ill_SVrefine2DISCOVARDovetail_12250:HG3_PB_SVrefine2PBcRDovetail_8518:HG3_PB_SVrefine2Falcon1Dovetail_10838:HG3_PB_HySA_26433:HG3_Ill_SVrefine2DISCOVARDovetail_12490:HG3_Ill_250bpfermikitraw_22501:HG3_Ill_150bpfermikitraw_21855:HG2_PB_SVrefine2PBcRplusDovetail_4843:HG2_PB_SVrefine2PB10Xhap12_12731:HG2_PB_SVrefine2Falcon1plusDovetail_5283:HG2_Ill_SpiralSDKrefine_7472:HG2_Ill_SVrefine2DISCOVARplusDovetail_5698:HG2_Ill_250bpfermikitraw_23158;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0136986;ClusterMaxSizeDiff=0.0136054;ClusterMaxEditDist=0.0273973;PBcalls=10;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-73;DistBack=200114;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=218;REFWIDENED=18:70323317-70323607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:57:./.:0:0:0:0:./.:0:0:0:0:1/1:0:28:./.:.:.:.:.:.
chr18	70916738	HG4_PB_assemblyticsfalcon_11606	CAGGTGGTGAGCAGAAACCAAAATTCCTAGTCATCCCAGATGGAGCGTCTCAGTGG	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23165:HG4_PB_HySA_25492:HG2_PB_pbsv_17530:HG3_PB_pbsv_17207:HG4_PB_pbsv_17428:HG4_PB_assemblyticsfalcon_11606:HG4_PB_HySA_25491:HG4_Ill_GATKHCSBGrefine_11885:HG4_Ill_250bpfermikitraw_22802:HG3_PB_assemblyticsfalcon_11810:HG2_PB_assemblyticsfalcon_11802:HG2_PB_assemblyticsPBcR_11427;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23165:HG4_PB_assemblyticsfalcon_11606:HG4_PB_HySA_25491:HG4_Ill_GATKHCSBGrefine_11885:HG4_Ill_250bpfermikitraw_22802:HG3_PB_assemblyticsfalcon_11810:HG2_PB_assemblyticsfalcon_11802:HG2_PB_assemblyticsPBcR_11427;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0366972;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0550459;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=42012;DistForward=-56;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=773;REFWIDENED=18:70916739-70917566;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1660.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:56:1/1:5:23:3:16:./.:0:1:1:1:1/1:0:9:./.:.:.:.:.:.
chr18	71273396	HG4_Ill_manta_3989	ATGACACATTATAATCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG4_Ill_Spiral_1357:HG4_Ill_Krunchall_23867:HG2_Ill_Krunchall_23510:HG2_Ill_Spiral_1151:HG4_PB_HySA_25498:HG2_PB_pbsv_17531:HG4_PB_pbsv_17430:HG4_Ill_MetaSV_2254:HG2_Ill_tnscope_1870:HG2_Ill_breakscan11_2514:HG2_Ill_MetaSV_2185:HG4_PB_SVrefine2PBcRDovetail_8776:HG4_PB_SVrefine2Falcon1Dovetail_10860:HG4_Ill_scalpel_15973:HG4_Ill_manta_3989:HG4_Ill_SVrefine2DISCOVARDovetail_12255:HG4_Ill_GATKHCSBGrefine_11886:HG4_10X_allpass_3167:HG3_PB_SVrefine2Falcon1Dovetail_10843:HG2_PB_SVrefine2PB10Xhap12_12734:HG2_PB_SVrefine2Falcon1plusDovetail_5287:HG2_PB_HySA_31931:HG2_Ill_manta_4707:HG2_Ill_SVrefine2DISCOVARplusDovetail_5701:HG2_Ill_GATKHCSBGrefine_11527:HG2_10X_allpass_2698:HG2_10X_SVrefine210Xhap12_12175;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12175:HG2_10X_allpass_2698:HG2_Ill_GATKHCSBGrefine_11527:HG2_Ill_SVrefine2DISCOVARplusDovetail_5701:HG2_Ill_manta_4707:HG2_PB_HySA_31931:HG2_PB_SVrefine2Falcon1plusDovetail_5287:HG2_PB_SVrefine2PB10Xhap12_12734:HG3_PB_SVrefine2Falcon1Dovetail_10843:HG4_10X_allpass_3167:HG4_Ill_GATKHCSBGrefine_11886:HG4_Ill_SVrefine2DISCOVARDovetail_12255:HG4_Ill_manta_3989:HG4_Ill_scalpel_15973:HG4_PB_SVrefine2Falcon1Dovetail_10860:HG4_PB_SVrefine2PBcRDovetail_8776;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0124611;ClusterMaxSizeDiff=0.0124611;ClusterMaxEditDist=0.0125;PBcalls=9;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=1;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=-42;DistForward=-312;DistMin=-312;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=18:71273397-71273735;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1661.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:28:0|1:37:2:1:25:0|1:31:0:0:26:0/1:18:19:0/1:21:12:.:.:.
chr18	71444207	HG4_Ill_GATKHCSBGrefine_11887	TAGAAATTGATCCAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGCTCGCACCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1152:HG3_PB_assemblyticsfalcon_11814:HG4_Ill_Krunchall_23869:HG2_Ill_Krunchall_23511:HG4_PB_assemblyticsfalcon_11616:HG4_Ill_Krunchall_23868:HG2_PB_assemblyticsfalcon_11808:HG2_PB_assemblyticsPBcR_11434:HG2_PB_PB10Xdip_14290:HG2_PB_SVrefine2PB10Xhap12_12736:HG4_Ill_MetaSV_2255:HG2_Ill_tnscope_1871:HG2_Ill_MetaSV_2186:HG4_PB_pbsv_17431:HG4_PB_SVrefine2PBcRDovetail_8777:HG4_PB_SVrefine2Falcon1Dovetail_10861:HG4_Ill_scalpel_15975:HG4_Ill_manta_3990:HG4_Ill_SVrefine2DISCOVARDovetail_12257:HG4_Ill_GATKHCSBGrefine_11887:HG4_10X_allpass_3168:HG2_PB_pbsv_17532:HG2_PB_SVrefine2PBcRplusDovetail_4847:HG2_PB_SVrefine2PB10Xhap12_12735:HG2_PB_SVrefine2Falcon1plusDovetail_5288:HG2_Ill_manta_4708:HG2_Ill_breakscan11_2515:HG2_Ill_GATKHCSBGrefine_11528:HG2_10X_allpass_2699:HG2_10X_SVrefine210Xhap12_12176:HG4_Ill_Spiral_1358;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12176:HG2_10X_allpass_2699:HG2_Ill_GATKHCSBGrefine_11528:HG2_Ill_breakscan11_2515:HG2_Ill_manta_4708:HG2_PB_SVrefine2Falcon1plusDovetail_5288:HG2_PB_SVrefine2PB10Xhap12_12735:HG2_PB_SVrefine2PBcRplusDovetail_4847:HG2_PB_pbsv_17532:HG4_10X_allpass_3168:HG4_Ill_GATKHCSBGrefine_11887:HG4_Ill_SVrefine2DISCOVARDovetail_12257:HG4_Ill_manta_3990:HG4_Ill_scalpel_15975:HG4_PB_SVrefine2Falcon1Dovetail_10861:HG4_PB_SVrefine2PBcRDovetail_8777:HG4_PB_pbsv_17431;NumExactMatchSVs=17;ClusterMaxShiftDist=0.10061;ClusterMaxSizeDiff=0.10061;ClusterMaxEditDist=0.10061;PBcalls=13;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=1;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-335;DistBack=22008;DistForward=-319;DistMin=-319;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=18:71444208-71444559;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1662.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:41:0|1:32:0:1:41:0|1:34:0:0:20:0/1:21:13:0/1:20:8:.:.:.
chr18	72152428	HG2_10X_allpass_2700	TTCCATGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2188:HG4_Ill_Krunchall_23876:HG3_Ill_Krunchall_23122:HG2_Ill_Krunchall_23521:HG3_PB_assemblyticsfalcon_11824:HG2_PB_assemblyticsfalcon_11817:HG2_PB_assemblyticsPBcR_11448:HG4_PB_assemblyticsfalcon_11624:HG4_Ill_Spiral_1359:HG3_PB_HySA_26459:HG4_PB_pbsv_17439:HG4_PB_SVrefine2PBcRDovetail_8780:HG4_PB_SVrefine2Falcon1Dovetail_10866:HG4_Ill_svaba_21607:HG4_Ill_scalpel_15981:HG4_Ill_SVrefine2DISCOVARDovetail_12261:HG4_Ill_GATKHCSBGrefine_11898:HG4_10X_allpass_3169:HG3_PB_pbsv_17216:HG3_PB_SVrefine2PBcRDovetail_8524:HG3_PB_SVrefine2Falcon1Dovetail_10847:HG3_Ill_svaba_21886:HG3_Ill_scalpel_16732:HG3_Ill_manta_3864:HG3_Ill_SVrefine2DISCOVARDovetail_12500:HG3_Ill_GATKHCSBGrefine_11440:HG3_10X_allpass_3328:HG2_PB_pbsv_17540:HG2_PB_SVrefine2PBcRplusDovetail_4852:HG2_PB_SVrefine2PB10Xhap12_12742:HG2_PB_SVrefine2Falcon1plusDovetail_5294:HG2_Ill_svaba_21665:HG2_Ill_scalpel_16378:HG2_Ill_manta_4710:HG2_Ill_breakscan11_2516:HG2_Ill_SpiralSDKrefine_7487:HG2_Ill_SVrefine2DISCOVARplusDovetail_5706:HG2_Ill_GATKHCSBGrefine_11537:HG2_10X_allpass_2700:HG2_10X_SVrefine210Xhap12_12179:HG4_Ill_MetaSV_2256:HG3_Ill_MetaSV_2324:HG2_Ill_tnscope_1872;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12179:HG2_10X_allpass_2700:HG2_Ill_GATKHCSBGrefine_11537:HG2_Ill_SVrefine2DISCOVARplusDovetail_5706:HG2_Ill_SpiralSDKrefine_7487:HG2_Ill_breakscan11_2516:HG2_Ill_manta_4710:HG2_Ill_scalpel_16378:HG2_Ill_svaba_21665:HG2_PB_SVrefine2Falcon1plusDovetail_5294:HG2_PB_SVrefine2PB10Xhap12_12742:HG2_PB_SVrefine2PBcRplusDovetail_4852:HG2_PB_pbsv_17540:HG3_10X_allpass_3328:HG3_Ill_GATKHCSBGrefine_11440:HG3_Ill_SVrefine2DISCOVARDovetail_12500:HG3_Ill_manta_3864:HG3_Ill_scalpel_16732:HG3_Ill_svaba_21886:HG3_PB_SVrefine2Falcon1Dovetail_10847:HG3_PB_SVrefine2PBcRDovetail_8524:HG3_PB_pbsv_17216:HG4_10X_allpass_3169:HG4_Ill_GATKHCSBGrefine_11898:HG4_Ill_SVrefine2DISCOVARDovetail_12261:HG4_Ill_scalpel_15981:HG4_Ill_svaba_21607:HG4_PB_SVrefine2Falcon1Dovetail_10866:HG4_PB_SVrefine2PBcRDovetail_8780:HG4_PB_pbsv_17439;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0808383;ClusterMaxSizeDiff=0.0808383;ClusterMaxEditDist=0.0808383;PBcalls=15;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-340;DistBack=6828;DistForward=-324;DistMin=-324;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=18:72152429-72152782;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1663.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:0:20:2:18:1/1:0:11:0:28:1/1:0:49:./.:2:11:.:.:.
chr18	73011480	HG2_PB_SVrefine2Falcon1plusDovetail_5295	AAAAGGGCATGGTGAGCTTGCACCAGTCACTAGATAGCTGCCCCCCAGTGGACGGTGATCCATCGTTAAAGGACATGGTGAGCTTGCACCAGGCACTAGATAGCTGCCCCGCAGTGGACGGTGATCCATCGTT	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5295:HG4_PB_SVrefine2Falcon1Dovetail_10869:HG4_PB_pbsv_17445:HG3_PB_pbsv_17223:HG4_PB_assemblyticsfalcon_11636:HG3_PB_HySA_26466:HG2_PB_pbsv_17546:HG4_PB_SVrefine2PBcRDovetail_8783:HG3_PB_SVrefine2PBcRDovetail_8526:HG2_PB_SVrefine2PBcRplusDovetail_4855:HG2_PB_SVrefine2PB10Xhap12_12745;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5295:HG4_PB_SVrefine2PBcRDovetail_8783:HG3_PB_SVrefine2PBcRDovetail_8526:HG2_PB_SVrefine2PBcRplusDovetail_4855:HG2_PB_SVrefine2PB10Xhap12_12745;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0150376;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.0301887;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-132;DistBack=-133;DistForward=-133;DistMin=-133;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=332;REFWIDENED=18:73011481-73011944;PctSeqSimilarity=0.984;PctSizeSimilarity=1;PctRecOverlap=0.6692;SizeDiff=0;StartDistance=-44;EndDistance=-44;GTMatch=0;TruScore=88;MatchId=1665.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:68:1/1:3:25:2:22:0/0:6:0:11:0:0/0:21:0:./.:.:.:.:.:.
chr18	74179040	HG2_10X_SVrefine210Xhap12_12193	TGAACCTGCAGCTGACAGCCCCTCTGGGCTGGCAGGAAGTCCTGCGTGTCTCTCGGAACCTGCAGCTCACAGCCCTTCTGGGTTGGCAGGAAGTCCTGCGTGTCTCTCGGAACCTGCAGCTCACAGCCCCTCTGGGCTGGCAGGAAGTCCTGCGTGTCTCTCG	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5301:HG4_Ill_Krunchall_23896:HG2_PB_pbsv_17556:HG4_PB_HySA_25545:HG3_PB_HySA_26495:HG3_Ill_GATKHCSBGrefine_11449:HG3_Ill_250bpfermikitraw_22555:HG3_Ill_150bpfermikitraw_21906:HG2_PB_SVrefine2Falcon2Bionano_8591:HG2_Ill_GATKHCSBGrefine_11544:HG4_PB_pbsv_17456:HG3_PB_pbsv_17236:HG4_PB_SVrefine2PBcRDovetail_8789:HG4_PB_SVrefine2Falcon1Dovetail_10876:HG4_Ill_SVrefine2DISCOVARDovetail_12270:HG3_PB_SVrefine2PBcRDovetail_8532:HG3_PB_SVrefine2Falcon1Dovetail_10854:HG3_Ill_SVrefine2DISCOVARDovetail_12510:HG2_PB_SVrefine2PBcRplusDovetail_4860:HG2_PB_SVrefine2PB10Xhap12_12751:HG2_Ill_SVrefine2DISCOVARplusDovetail_5716:HG2_10X_SVrefine210Xhap12_12193;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12193:HG2_Ill_SVrefine2DISCOVARplusDovetail_5716:HG2_PB_SVrefine2PB10Xhap12_12751:HG2_PB_SVrefine2PBcRplusDovetail_4860:HG3_Ill_SVrefine2DISCOVARDovetail_12510:HG3_PB_SVrefine2Falcon1Dovetail_10854:HG3_PB_SVrefine2PBcRDovetail_8532:HG4_Ill_SVrefine2DISCOVARDovetail_12270:HG4_PB_SVrefine2Falcon1Dovetail_10876:HG4_PB_SVrefine2PBcRDovetail_8789;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0183486;ClusterMaxSizeDiff=0.0183486;ClusterMaxEditDist=0.0366972;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-162;DistBack=20978;DistForward=-134;DistMin=-134;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=160;REFWIDENED=18:74179041-74179362;PctSeqSimilarity=0.9853;PctSizeSimilarity=1;PctRecOverlap=0.589;SizeDiff=0;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=85;MatchId=1666.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:93:1/1:1:36:0:34:./.:2:1:3:1:0/1:7:26:./.:.:.:.:.:.
chr18	74769770	HG2_PB_SVrefine2Falcon2Bionano_8602	GGCGGGGAGTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTTTTAATAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTGTCGATCTCCTGACCTCGTGTTCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGA	G	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2194:HG3_PB_HySA_26525:HG4_PB_assemblyticsfalcon_11678:HG2_PB_assemblyticsfalcon_11868:HG3_PB_assemblyticsfalcon_11873:HG2_PB_assemblyticsPBcR_11492:HG4_Ill_Krunchall_23906:HG3_Ill_Krunchall_23156:HG4_Ill_Spiral_1360:HG3_Ill_Spiral_17957:HG3_PB_pbsv_17257:HG4_PB_pbsv_17470:HG2_PB_HySA_32040:HG4_PB_SVrefine2PBcRDovetail_8798:HG4_PB_SVrefine2Falcon1Dovetail_10887:HG4_Ill_scalpel_16007:HG4_Ill_manta_3996:HG4_Ill_SVrefine2DISCOVARDovetail_12280:HG4_Ill_GATKHCSBGrefine_11916:HG4_10X_allpass_3173:HG3_PB_SVrefine2PBcRDovetail_8547:HG3_PB_SVrefine2Falcon1Dovetail_10869:HG3_Ill_scalpel_16760:HG3_Ill_manta_3868:HG3_Ill_SVrefine2DISCOVARDovetail_12517:HG3_Ill_GATKHCSBGrefine_11458:HG3_10X_allpass_3333:HG2_PB_pbsv_17573:HG2_PB_SVrefine2PBcRplusDovetail_4870:HG2_PB_SVrefine2PB10Xhap12_12763:HG2_PB_SVrefine2Falcon2Bionano_8602:HG2_PB_SVrefine2Falcon1plusDovetail_5313:HG2_Ill_scalpel_16405:HG2_Ill_manta_4716:HG2_Ill_breakscan11_2521:HG2_Ill_SVrefine2DISCOVARplusDovetail_5726:HG2_Ill_GATKHCSBGrefine_11556:HG2_10X_allpass_2701:HG2_10X_SVrefine210Xhap12_12201:HG3_Ill_MetaSV_2331:HG2_Ill_tnscope_1874;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12201:HG2_10X_allpass_2701:HG2_Ill_GATKHCSBGrefine_11556:HG2_Ill_SVrefine2DISCOVARplusDovetail_5726:HG2_Ill_breakscan11_2521:HG2_Ill_manta_4716:HG2_Ill_scalpel_16405:HG2_PB_SVrefine2Falcon1plusDovetail_5313:HG2_PB_SVrefine2Falcon2Bionano_8602:HG2_PB_SVrefine2PB10Xhap12_12763:HG2_PB_SVrefine2PBcRplusDovetail_4870:HG2_PB_pbsv_17573:HG3_10X_allpass_3333:HG3_Ill_GATKHCSBGrefine_11458:HG3_Ill_SVrefine2DISCOVARDovetail_12517:HG3_Ill_manta_3868:HG3_Ill_scalpel_16760:HG3_PB_SVrefine2Falcon1Dovetail_10869:HG3_PB_SVrefine2PBcRDovetail_8547:HG4_10X_allpass_3173:HG4_Ill_GATKHCSBGrefine_11916:HG4_Ill_SVrefine2DISCOVARDovetail_12280:HG4_Ill_manta_3996:HG4_Ill_scalpel_16007:HG4_PB_SVrefine2Falcon1Dovetail_10887:HG4_PB_SVrefine2PBcRDovetail_8798;NumExactMatchSVs=26;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.105263;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-301;DistBack=-121;DistForward=-125;DistMin=-125;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=18:74769771-74770087;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1667.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:58:1/1:1:14:0:12:1/1:0:10:0:19:1/1:0:42:./.:2:6:.:.:.
chr18	75055359	HG3_PB_SVrefine2Falcon1Dovetail_10876	GTGTTGGGGAGGAGGTGTTGGAGAGGGTATTAGGGAGAGGGTGTTGGGGAGGGGGTGTTGGAGGGGGTGTTGGGAGGGGGTGTTGGGGGGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12202:HG4_Ill_GATKHC_27776:HG4_Ill_GATKHCSBGrefine_11920:HG2_PB_SVrefine2PB10Xhap12_12767:HG4_PB_SVrefine2PBcRDovetail_8803:HG4_Ill_SVrefine2DISCOVARDovetail_12282:HG3_PB_assemblyticsfalcon_11881:HG3_PB_SVrefine2Falcon1Dovetail_10876:HG2_PB_SVrefine2Falcon2Bionano_8606:HG4_PB_SVrefine2Falcon1Dovetail_10894:HG4_PB_assemblyticsfalcon_11687:HG2_PB_pbsv_17581:HG4_PB_HySA_25581:HG3_PB_pbsv_17263:HG4_PB_pbsv_17480:HG2_Ill_SVrefine2DISCOVARplusDovetail_5729;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8606:HG3_PB_SVrefine2Falcon1Dovetail_10876:HG3_PB_assemblyticsfalcon_11881:HG4_Ill_SVrefine2DISCOVARDovetail_12282:HG4_PB_SVrefine2PBcRDovetail_8803;NumExactMatchSVs=5;ClusterMaxShiftDist=0.236559;ClusterMaxSizeDiff=0.236559;ClusterMaxEditDist=0.255319;PBcalls=11;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-90;DistBack=-39;DistForward=25155;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=89;REFWIDENED=18:75055270-75055448;PctSeqSimilarity=0.9943;PctSizeSimilarity=1;PctRecOverlap=0.5824;SizeDiff=0;StartDistance=38;EndDistance=38;GTMatch=0;TruScore=85;MatchId=1668.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:0|1:28:4:3:19:1|0:0:6:25:1:./.:2:3:./.:.:.:.:.:.
chr18	75992380	HG2_PB_PB10Xdip_14373	AGGTGTGGACGTGCTGTTGCTCCTGACGGCTAATTACTTCTCCTGTCAGCGCCATCTTGGTGTGCTACCTAATGTGGTTATTTCCAAGATGATACATCAAATCTT	GTA	20	PASS	ClusterIDs=HG4_PB_pbsv_17497:HG4_Ill_GATKHC_27809:HG4_Ill_GATKHCSBGrefine_11929:HG2_Ill_GATKHC_27862:HG2_Ill_SpiralSDKrefine_7526:HG4_Ill_manta_4005:HG2_PB_SVrefine2PB10Xhap12_12777:HG2_PB_SVrefine2Falcon1plusDovetail_5328:HG2_PB_PB10Xdip_14373:HG2_Ill_manta_4720:HG2_Ill_SVrefine2DISCOVARplusDovetail_5738:HG2_10X_SVrefine210Xhap12_12214:HG4_Ill_Spiral_1362:HG2_Ill_Spiral_1155:HG4_Ill_MetaSV_2263:HG2_Ill_MetaSV_2198:HG4_Ill_svaba_21677:HG4_Ill_scalpel_16034:HG2_PB_pbsv_17599:HG2_Ill_svaba_21731:HG2_Ill_scalpel_16425:HG2_10X_allpass_2706:HG4_Ill_Krunchall_23938:HG2_Ill_Krunchall_23584;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12214:HG2_Ill_SVrefine2DISCOVARplusDovetail_5738:HG2_Ill_manta_4720:HG2_PB_PB10Xdip_14373:HG2_PB_SVrefine2Falcon1plusDovetail_5328:HG2_PB_SVrefine2PB10Xhap12_12777:HG4_Ill_manta_4005;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0886699;ClusterMaxSizeDiff=0.0886699;ClusterMaxEditDist=0.0909091;PBcalls=5;Illcalls=17;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-102;DistBack=1645;DistForward=-105;DistMin=-105;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=18:75992380-75992484;PctSeqSimilarity=1;PctSizeSimilarity=0.9808;PctRecOverlap=1;SizeDiff=-2;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1669.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:20:0|1:17:3:2:9:1|0:0:9:23:0:0/1:35:19:./.:.:.:.:4845:.
chr18	76169473	HG3_PB_SVrefine2PBcRDovetail_8561	TATGACGAGAGATGAGCCCAGGTCCCCATGATGGTGGGCAACGTCTTGCTGAGCCCGGGAGGCCCCCGCACACACTGAATGACGAGAGATGAGCCCAGGTCCCCATGATGGTGGGCAACGTCTTGCTGAGCCCGGGAGGCCCCCGCACACACTGAATGACGAGAGATGAGCCCAGGTCCCCATGATGGTGGGCAACGTCTTGCTGAGCCCGGGAGGCCCCCGCACACACTGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12220:HG2_PB_HySA_32093:HG3_PB_pbsv_17286:HG4_PB_pbsv_17505:HG2_PB_pbsv_17608:HG4_PB_SVrefine2PBcRDovetail_8818:HG4_PB_SVrefine2Falcon1Dovetail_10912:HG4_Ill_SVrefine2DISCOVARDovetail_12289:HG3_PB_SVrefine2PBcRDovetail_8561:HG3_PB_SVrefine2Falcon1Dovetail_10897:HG3_Ill_SVrefine2DISCOVARDovetail_12527:HG2_PB_SVrefine2Falcon2Bionano_8622:HG2_PB_SVrefine2Falcon1plusDovetail_5340:HG2_Ill_SVrefine2DISCOVARplusDovetail_5742;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12220:HG4_PB_SVrefine2PBcRDovetail_8818:HG4_PB_SVrefine2Falcon1Dovetail_10912:HG4_Ill_SVrefine2DISCOVARDovetail_12289:HG3_PB_SVrefine2PBcRDovetail_8561:HG3_PB_SVrefine2Falcon1Dovetail_10897:HG3_Ill_SVrefine2DISCOVARDovetail_12527:HG2_PB_SVrefine2Falcon2Bionano_8622:HG2_PB_SVrefine2Falcon1plusDovetail_5340:HG2_Ill_SVrefine2DISCOVARplusDovetail_5742;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00862069;ClusterMaxSizeDiff=0.00862069;ClusterMaxEditDist=0.0172414;PBcalls=10;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-231;DistBack=-78;DistForward=-165;DistMin=-165;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=154;REFWIDENED=18:76169474-76169858;PctSeqSimilarity=0.9931;PctSizeSimilarity=1;PctRecOverlap=0.3793;SizeDiff=0;StartDistance=-144;EndDistance=-144;GTMatch=0;TruScore=79;MatchId=1670.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:29:0|1:30:5:1:16:./.:1:2:3:0:0/1:16:7:./.:.:.:.:.:.
chr18	76202121	HG2_10X_SVrefine210Xhap12_12223	TAAAAGATTGATCAAGGTTCTGGATATTAGACCTTTGTCAGATGGTAGATTGCAAAAGTTTTCTCCCATTCTGCAGGTTGCCTGTTCACTCTGATGATAGTTTCTTTTGCTATGCAGATGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGACATTGCTTTTGGCATTTTCGTCTATGCCTATGTCCTGAGTGGTATTGCCTAGGTTTTATTCTAGGGTTTTCATAATTTTGGGTTTCACATTGAAGTCTTTAATTCATCTTGAGTTAATTTTTGTATAAGGTGTAAGGAACTTAAACAAATTTACAAGAAAAAACAAACAACCCCATTTGAAAGGGGGCAAAGTATATGAAAAGACGCTTCTCAAAAGAAGACATTTACATGGCCAACAAACATATGCAAAAAAGCTCAACATGACTGATCATTAGAGAAATGCAAATCAAAACCACAACAAGATAACATCTCACGTGAGTTAGAATGGTGGTTATTAAAAAGTCAAGAACCAATAGATGCTGGTGAGGCTGTAGAGAAATAGGAATGCTTTTACACTGTTGGTGGGAATGTAAATTACTTCAATCATTGTGGAAGACACTGTGACAATTCCTCAAGGATCTAAAACCCAAATACCATTTGACCCAGCAATCCCATTACTGAGTGTATACCCAAAGGAACATAAATCATTCTACTATAAAGACACATGCACAGCTATGTTTATTGCAGCACTAATTGCAATAGCAAAGAGATGGAACCAACCCAAATGCCCATTAATGATAGACTGGATACAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGATCATGTCCTTTGCAGGGACATGGATAAAGCTGGAAGGCATCATTCCCAGAAAACTAACACAGTAACAGAAAACCAAACACCACATGTTCTCACTCATAAGTGGGAATTGAACAATGAGAACACATGGACAAAGGGAGGGGAACAACACACACTCGGGCCTGTCATGGGGTTGGGGGAGAGGGGAGGGATGGCACCATGACAAATAGCTAATGCATATGGGGCCGAAACCTAGATGACTGGTTGATAGATGCAGCAAACCACCATGGCACATGTATACCTATGTAACAAACCTGCACGTTCTGTGCATGTATCCTAGAACTTAAAGTAAAAAAAAAAAAAGATATTTTTAATAAGAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_23591:HG2_10X_allpass_2708:HG4_PB_pbsv_17509:HG2_Ill_Krunchall_23592:HG4_Ill_GATKHCSBGrefine_11934:HG2_PB_SVrefine2PBcRplusDovetail_4896:HG2_Ill_tnscope_1877:HG4_PB_SVrefine2PBcRDovetail_8823:HG4_PB_SVrefine2Falcon1Dovetail_10918:HG4_Ill_SVrefine2DISCOVARDovetail_12294:HG4_Ill_MetaSV_2269:HG4_Ill_Krunchall_23945:HG3_PB_SVrefine2Falcon1Dovetail_10903:HG2_PB_pbsv_17614:HG2_PB_SVrefine2PBcRplusDovetail_4895:HG2_PB_SVrefine2PB10Xhap12_12791:HG2_PB_SVrefine2Falcon2Bionano_8627:HG2_PB_SVrefine2Falcon1plusDovetail_5345:HG2_Ill_MetaSV_2204:HG2_10X_SVrefine210Xhap12_12223:HG4_PB_HySA_25636:HG4_10X_allpass_3177:HG4_Ill_Krunchall_23944;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12223:HG2_Ill_MetaSV_2204:HG2_PB_SVrefine2Falcon1plusDovetail_5345:HG2_PB_SVrefine2Falcon2Bionano_8627:HG2_PB_SVrefine2PB10Xhap12_12791:HG2_PB_SVrefine2PBcRplusDovetail_4895:HG2_PB_pbsv_17614:HG3_PB_SVrefine2Falcon1Dovetail_10903:HG4_Ill_Krunchall_23945:HG4_Ill_MetaSV_2269:HG4_Ill_SVrefine2DISCOVARDovetail_12294:HG4_PB_SVrefine2Falcon1Dovetail_10918:HG4_PB_SVrefine2PBcRDovetail_8823;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0256516;ClusterMaxSizeDiff=0.0190161;ClusterMaxEditDist=0.105916;PBcalls=11;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-1219;DistBack=-1219;DistForward=-1218;DistMin=-1219;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=18:76202122-76203356;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1671.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:46:30:0|1:44:0:0:23:1|0:0:42:35:0:0/1:54:9:0/1:84:42:1116:.:.
chr18	76264365	HG2_Ill_GATKHCSBGrefine_11581	CCCTGAGGATGCCAGCCCGACAGAGCACGGTGTCGGCCAGGAGGAGGATGGA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2527:HG2_PB_assemblyticsPBcR_11527:HG3_PB_pbsv_17295:HG2_PB_pbsv_17616:HG4_PB_assemblyticsfalcon_11733:HG4_Ill_Krunchall_23949:HG4_Ill_GATKHC_27823:HG3_Ill_GATKHC_27742:HG3_Ill_GATKHCSBGrefine_11480:HG2_PB_assemblyticsfalcon_11911:HG2_Ill_GATKHC_27881:HG2_Ill_GATKHCSBGrefine_11581;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11581:HG2_Ill_GATKHC_27881:HG2_PB_assemblyticsfalcon_11911:HG3_Ill_GATKHCSBGrefine_11480:HG3_Ill_GATKHC_27742:HG4_Ill_GATKHC_27823:HG4_Ill_Krunchall_23949:HG4_PB_assemblyticsfalcon_11733;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0196078;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0392157;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=1496;DistForward=-52;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=785;REFWIDENED=18:76264366-76265201;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1672.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:18:./.:0:1:3:2:./.:0:2:0:1:./.:1:18:./.:.:.:.:3216:.
chr18	76428074	HG2_PB_SVrefine2Falcon1plusDovetail_5355	CTCTCATCCCCTCAATGGGATCCAGCAAGAGGTGCCATCTTGACACAGAGACCAAGCCCTCACCAACACCAAG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5355:HG4_PB_pbsv_17528:HG4_PB_assemblyticsfalcon_11747:HG2_PB_HySA_32105:HG2_PB_pbsv_17631:HG3_PB_pbsv_17314:HG3_PB_HySA_26579:HG4_Ill_GATKHC_27836:HG4_Ill_GATKHCSBGrefine_11941:HG3_Ill_250bpfermikitraw_22599:HG2_Ill_Krunchall_23599:HG2_Ill_150bpfermikitraw_21916:HG3_PB_SVrefine2PBcRDovetail_8576:HG3_PB_SVrefine2Falcon1Dovetail_10917:HG2_PB_SVrefine2PBcRplusDovetail_4905:HG2_PB_SVrefine2PB10Xhap12_12805:HG2_PB_SVrefine2Falcon2Bionano_8637;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5355:HG3_PB_SVrefine2PBcRDovetail_8576:HG3_PB_SVrefine2Falcon1Dovetail_10917:HG2_PB_SVrefine2PBcRplusDovetail_4905:HG2_PB_SVrefine2PB10Xhap12_12805:HG2_PB_SVrefine2Falcon2Bionano_8637;NumExactMatchSVs=6;ClusterMaxShiftDist=0.041958;ClusterMaxSizeDiff=0.041958;ClusterMaxEditDist=0.111888;PBcalls=12;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-72;DistBack=-73;DistForward=-1;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=290;REFWIDENED=18:76428075-76428436;PctSeqSimilarity=0.9695;PctSizeSimilarity=0.9861;PctRecOverlap=0.3288;SizeDiff=1;StartDistance=-49;EndDistance=-48;GTMatch=0;TruScore=76;MatchId=1673.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:40:1/1:1:10:1:10:./.:11:1:12:0:0/1:8:1:./.:.:.:.:.:.
chr18	76477566	HG3_Ill_GATKHCSBGrefine_11488	CGGGTCTCCACCTCCCGAGCCCATGACCGACACCGCGGGTCTGCACCTCCCGAGCCTATGACTGACACAGT	C	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_11587:HG3_PB_pbsv_17316:HG2_PB_pbsv_17632:HG3_Ill_svaba_21964:HG3_Ill_GATKHCSBGrefine_11488:HG3_Ill_250bpfermikitraw_22601:HG2_Ill_svaba_21746:HG2_Ill_SpiralSDKrefine_7536;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11587:HG3_Ill_svaba_21964:HG3_Ill_GATKHCSBGrefine_11488:HG3_Ill_250bpfermikitraw_22601:HG2_Ill_svaba_21746:HG2_Ill_SpiralSDKrefine_7536;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0142857;ClusterMaxSizeDiff=0.0141844;ClusterMaxEditDist=0.0285714;PBcalls=2;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-70;DistBack=29300;DistForward=94;DistMin=94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=67;REFWIDENED=18:76477565-76477704;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1674.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:42:./.:13:4:11:27:./.:9:1:0:4:0/1:10:5:./.:.:.:.:.:.
chr18	77106404	HG4_PB_SVrefine2PBcRDovetail_8843	TGGCACACACTTGGTCAGCGCACGTCAGCACGTGCTCAGCGCACAGTCAGCACACATTCGGCACACATTTAGCACACTACATGCTTGGCACACACTCAGCGCACCTCAGCATGTGTTCAGTGCACAGTCAGCACACACTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12251:HG2_PB_pbsv_17653:HG3_PB_HySA_26609:HG4_PB_pbsv_17551:HG3_PB_pbsv_17339:HG4_10X_allpass_3181:HG3_Ill_250bpfermikitraw_22613:HG3_Ill_150bpfermikitraw_21963:HG3_10X_allpass_3339:HG2_Ill_250bpfermikitraw_23275:HG2_Ill_150bpfermikitraw_21930:HG4_PB_SVrefine2PBcRDovetail_8843:HG4_PB_SVrefine2Falcon1Dovetail_10954:HG4_Ill_SVrefine2DISCOVARDovetail_12308:HG3_PB_SVrefine2PBcRDovetail_8591:HG3_Ill_SVrefine2DISCOVARDovetail_12543:HG2_PB_SVrefine2PBcRplusDovetail_4920:HG2_PB_SVrefine2PB10Xhap12_12824:HG2_PB_SVrefine2Falcon2Bionano_8652:HG2_PB_SVrefine2Falcon1plusDovetail_5371:HG2_Ill_SVrefine2DISCOVARplusDovetail_5758;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12251:HG4_PB_SVrefine2PBcRDovetail_8843:HG4_PB_SVrefine2Falcon1Dovetail_10954:HG4_Ill_SVrefine2DISCOVARDovetail_12308:HG3_PB_SVrefine2PBcRDovetail_8591:HG3_Ill_SVrefine2DISCOVARDovetail_12543:HG2_PB_SVrefine2PBcRplusDovetail_4920:HG2_PB_SVrefine2PB10Xhap12_12824:HG2_PB_SVrefine2Falcon2Bionano_8652:HG2_PB_SVrefine2Falcon1plusDovetail_5371:HG2_Ill_SVrefine2DISCOVARplusDovetail_5758;NumExactMatchSVs=11;ClusterMaxShiftDist=0.028777;ClusterMaxSizeDiff=0.028777;ClusterMaxEditDist=0.0363636;PBcalls=11;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-139;DistBack=4907;DistForward=10231;DistMin=4907;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=181;REFWIDENED=18:77106405-77106724;PctSeqSimilarity=0.9919;PctSizeSimilarity=1;PctRecOverlap=0.9214;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=97;MatchId=1675.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:./.:3:6:0:0:./.:0:0:0:0:0/1:4:11:./.:.:.:.:.:.
chr18	77499761	HG2_PB_SVrefine2PB10Xhap12_12854	TTCATACCCGCCGCCAGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12264:HG2_PB_HySA_32172:HG4_Ill_GATKHCSBGrefine_11964:HG3_Ill_GATKHCSBGrefine_11502:HG2_Ill_GATKHCSBGrefine_11604:HG4_Ill_manta_4014:HG3_Ill_manta_3879:HG3_Ill_MetaSV_2350:HG4_Ill_Spiral_1365:HG3_Ill_Spiral_18000:HG2_Ill_Spiral_1157:HG3_PB_pbsv_17366:HG2_PB_pbsv_17684:HG3_PB_HySA_26635:HG4_10X_allpass_3185:HG3_10X_allpass_3341:HG2_10X_allpass_2711:HG4_PB_pbsv_17588:HG2_Ill_tnscope_1879:HG4_PB_HySA_25693:HG4_PB_SVrefine2PBcRDovetail_8855:HG4_PB_SVrefine2Falcon1Dovetail_10974:HG3_PB_SVrefine2PBcRDovetail_8611:HG3_Ill_SVrefine2DISCOVARDovetail_12550:HG2_PB_SVrefine2PBcRplusDovetail_4943:HG2_PB_SVrefine2PB10Xhap12_12854:HG2_PB_SVrefine2Falcon2Bionano_8670:HG2_PB_SVrefine2Falcon1plusDovetail_5396:HG4_Ill_SVrefine2DISCOVARDovetail_12315:HG3_PB_SVrefine2Falcon1Dovetail_10964:HG2_Ill_SVrefine2DISCOVARplusDovetail_5769;NumClusterSVs=31;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5396:HG2_PB_SVrefine2Falcon2Bionano_8670:HG2_PB_SVrefine2PB10Xhap12_12854:HG2_PB_SVrefine2PBcRplusDovetail_4943:HG3_Ill_SVrefine2DISCOVARDovetail_12550:HG3_PB_SVrefine2PBcRDovetail_8611:HG4_PB_SVrefine2Falcon1Dovetail_10974:HG4_PB_SVrefine2PBcRDovetail_8855;NumExactMatchSVs=8;ClusterMaxShiftDist=0.092219;ClusterMaxSizeDiff=0.092219;ClusterMaxEditDist=0.0923521;PBcalls=14;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-360;DistBack=7048;DistForward=-272;DistMin=-272;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=90;REFWIDENED=18:77499792-77500211;PctSeqSimilarity=0.9773;PctSizeSimilarity=1;PctRecOverlap=0.9584;SizeDiff=0;StartDistance=-15;EndDistance=-15;GTMatch=1;TruScore=97;MatchId=1677.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:72:1/1:1:39:0:26:./.:5:2:3:3:0/1:22:19:0/1:9:3:.:.:.
chr18	77540186	HG2_PB_SVrefine2Falcon1plusDovetail_5401	TCCAGCCAGGACTTTGCTTCCTGCATCTTAGACCCTGCTGACCTCACCCTCCAGAGGCTGCCCTGTGAACATCAGTGCTGGCCGGGTGCACACTGTCCGCCCTGGA	T	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_10978:HG4_PB_pbsv_17595:HG2_PB_pbsv_17691:HG4_PB_SVrefine2PBcRDovetail_8858:HG2_PB_assemblyticsfalcon_11981:HG2_PB_assemblyticsPBcR_11598:HG2_PB_SVrefine2PBcRplusDovetail_4947:HG2_PB_SVrefine2PB10Xhap12_12859:HG2_PB_SVrefine2Falcon2Bionano_8674:HG2_PB_SVrefine2Falcon1plusDovetail_5401;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5401:HG2_PB_SVrefine2Falcon2Bionano_8674:HG2_PB_SVrefine2PB10Xhap12_12859:HG2_PB_SVrefine2PBcRplusDovetail_4947:HG2_PB_assemblyticsPBcR_11598:HG2_PB_assemblyticsfalcon_11981:HG4_PB_SVrefine2PBcRDovetail_8858;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0287081;ClusterMaxSizeDiff=0.0287081;ClusterMaxEditDist=0.057971;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-105;DistBack=-270;DistForward=1835;DistMin=-270;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=319;REFWIDENED=18:77540141-77540564;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1678.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:./.:21:7:8:31:./.:0:1:0:1:./.:2:4:./.:.:.:.:.:.
chr18	77567689	HG2_PB_SVrefine2Falcon1plusDovetail_5402	CCCCAGAGTCCGCACTCTGAGAAGTTGCTCCGGCGCCACTGACGGGCACTCCATGTTATATGCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTACGGTCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTATGGG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5402:HG2_PB_pbsv_17692:HG3_PB_SVrefine2PBcRDovetail_8616:HG2_PB_SVrefine2PBcRplusDovetail_4948:HG2_PB_SVrefine2PB10Xhap12_12860:HG2_PB_SVrefine2Falcon2Bionano_8675;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5402:HG3_PB_SVrefine2PBcRDovetail_8616:HG2_PB_SVrefine2PBcRplusDovetail_4948:HG2_PB_SVrefine2PB10Xhap12_12860:HG2_PB_SVrefine2Falcon2Bionano_8675;NumExactMatchSVs=5;ClusterMaxShiftDist=0.164103;ClusterMaxSizeDiff=0.164103;ClusterMaxEditDist=0.194872;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-421;DistBack=-302;DistForward=-422;DistMin=-422;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1474;REFWIDENED=18:77567690-77569584;PctSeqSimilarity=0.9572;PctSizeSimilarity=0.9976;PctRecOverlap=0.1991;SizeDiff=1;StartDistance=-338;EndDistance=-337;GTMatch=0;TruScore=71;MatchId=1679.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:30:./.:3:5:2:10:0/0:17:0:15:0:0/0:47:0:0/0:25:2:.:.:.
chr19	818879	HG2_PB_pbsv_17756	GAACTCCAGGCCTCAAGTGATCTTCCTGCCTCAGCCTCCCAAAGCACTGGAATTACAGGTGTGAGCCACTGCGCTCGGCCTTATTATTATTATTTTATTTATTATTATTATTTTTTGAGATGGAGTCTTGCTCTCTTGCCCAAGCTGGCGTGCAGTGGAACAGTCTCAGCTCACTGCAACCTCCACCTCCCGTCCTCAAGCGATTCTCCCACCTCAGCCTCCGGAGTAGCTGAGACTACAGGCACACACCACCACGCTGGGCTAATTTTTGTATTTTTAGTAGAGGTGTGGTTTCACCACATTGGCCAGACTGGTCTCA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_17756:HG3_PB_HySA_26746:HG3_10X_allpass_3349:HG3_PB_pbsv_17454:HG2_Ill_MetaSV_2220:HG2_Ill_manta_4737:HG3_PB_SVrefine2Falcon1Dovetail_11026;NumClusterSVs=7;ExactMatchIDs=HG2_PB_pbsv_17756:HG3_PB_SVrefine2Falcon1Dovetail_11026;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0406886;ClusterMaxSizeDiff=0.0406886;ClusterMaxEditDist=0.0727848;PBcalls=4;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-318;DistBack=-352;DistForward=10019;DistMin=-352;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=71;REFWIDENED=19:818880-819268;PctSeqSimilarity=0.8917;PctSizeSimilarity=1;PctRecOverlap=0.815;SizeDiff=0;StartDistance=-59;EndDistance=-59;GTMatch=0;TruScore=90;MatchId=1683.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:12:0|1:22:2:1:9:./.:5:1:43:0:0/1:35:5:0/0:31:1:.:.:.
chr19	861323	HG2_Ill_GATKHCSBGrefine_11630	CCCCCTGCACCCTCACCCCGGGTCCAGCCTCGACCTCTCCTGCTGCATGGGGACCCCGCCCTACAA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_17460:HG2_PB_pbsv_17763:HG4_PB_pbsv_17673:HG4_Ill_svaba_21789:HG4_Ill_GATKHC_27956:HG4_Ill_GATKHCSBGrefine_11997:HG4_Ill_250bpfermikitraw_22983:HG3_Ill_svaba_22058:HG2_Ill_svaba_21836:HG2_Ill_GATKHCSBGrefine_11630;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11630:HG2_Ill_svaba_21836:HG3_Ill_svaba_22058:HG4_Ill_250bpfermikitraw_22983:HG4_Ill_GATKHCSBGrefine_11997:HG4_Ill_GATKHC_27956:HG4_Ill_svaba_21789:HG4_PB_pbsv_17673;NumExactMatchSVs=8;ClusterMaxShiftDist=0.030303;ClusterMaxSizeDiff=0.030303;ClusterMaxEditDist=0.0305344;PBcalls=3;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-65;DistBack=47;DistForward=54;DistMin=47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=19:861322-861393;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1684.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:14:./.:11:8:4:6:./.:4:1:0:5:./.:0:0:./.:.:.:.:.:.
chr19	1923870	HG2_PB_SVrefine2PBcRplusDovetail_5011	CGCCTCGGCCTCCCGAAGTGCTGGGATGACAGGCGTGAGCCACCGTGCCCGGCCTATTTTTTATATTGTAGTAGAGACAGGGTTTCACCATGTTGTTTGGACTGGTCTCGAACTCCAGAGCTCAGACAGTCTGTCT	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8906:HG4_PB_assemblyticsfalcon_11937:HG3_PB_assemblyticsfalcon_12146:HG2_PB_assemblyticsfalcon_12075:HG2_PB_assemblyticsPBcR_11691:HG3_PB_pbsv_17491:HG3_Ill_Krunchall_23262:HG3_PB_HySA_26768:HG2_PB_pbsv_17792:HG4_PB_pbsv_17704:HG3_PB_SVrefine2PBcRDovetail_8662:HG3_PB_SVrefine2Falcon1Dovetail_11049:HG4_PB_HySA_25821:HG4_Ill_MetaSV_2294:HG2_PB_HySA_32316:HG4_PB_SVrefine2Falcon1Dovetail_11049:HG4_Ill_manta_4029:HG4_Ill_SVrefine2DISCOVARDovetail_12348:HG4_Ill_GATKHC_27981:HG4_Ill_GATKHCSBGrefine_12007:HG4_10X_allpass_3196:HG3_Ill_scalpel_16846:HG3_Ill_SVrefine2DISCOVARDovetail_12576:HG3_Ill_MetaSV_2369:HG3_Ill_GATKHC_27907:HG3_Ill_GATKHCSBGrefine_11535:HG3_10X_allpass_3356:HG2_PB_SVrefine2PBcRplusDovetail_5011:HG2_PB_SVrefine2PB10Xhap12_12943:HG2_PB_SVrefine2Falcon2Bionano_8709:HG2_PB_SVrefine2Falcon1plusDovetail_5461:HG2_Ill_scalpel_16492:HG2_Ill_manta_4742:HG2_Ill_SVrefine2DISCOVARplusDovetail_5796:HG2_Ill_MetaSV_2226:HG2_Ill_GATKHCSBGrefine_11639:HG2_10X_allpass_2719:HG2_10X_SVrefine210Xhap12_12309;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12309:HG2_10X_allpass_2719:HG2_Ill_GATKHCSBGrefine_11639:HG2_Ill_MetaSV_2226:HG2_Ill_SVrefine2DISCOVARplusDovetail_5796:HG2_Ill_manta_4742:HG2_Ill_scalpel_16492:HG2_PB_SVrefine2Falcon1plusDovetail_5461:HG2_PB_SVrefine2Falcon2Bionano_8709:HG2_PB_SVrefine2PB10Xhap12_12943:HG2_PB_SVrefine2PBcRplusDovetail_5011:HG3_10X_allpass_3356:HG3_Ill_GATKHCSBGrefine_11535:HG3_Ill_GATKHC_27907:HG3_Ill_MetaSV_2369:HG3_Ill_SVrefine2DISCOVARDovetail_12576:HG3_Ill_scalpel_16846:HG4_10X_allpass_3196:HG4_Ill_GATKHCSBGrefine_12007:HG4_Ill_GATKHC_27981:HG4_Ill_SVrefine2DISCOVARDovetail_12348:HG4_Ill_manta_4029:HG4_PB_SVrefine2Falcon1Dovetail_11049;NumExactMatchSVs=23;ClusterMaxShiftDist=0.021978;ClusterMaxSizeDiff=0.021978;ClusterMaxEditDist=0.184502;PBcalls=18;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-135;DistBack=17004;DistForward=4746;DistMin=4746;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=53;REFWIDENED=19:1923871-1924058;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1686.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:2:28:1:14:1/1:0:9:0:13:1/1:0:33:./.:.:.:.:.:.
chr19	2332896	HG2_PB_SVrefine2Falcon1plusDovetail_5466	CCTGGGCAGGGGAGCAGAAGGAAGGTGGGGATGGCAGGTGCGGGCGGCTGGACTGGGCTCTGCTGGGAGGGGGAGCAGGAGGAGGGTGGGGATGGCAGGTGCGGGCGGCTGGACTGGGCTCTG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5466:HG2_PB_HySA_32328:HG3_PB_pbsv_17500:HG2_PB_pbsv_17799:HG4_Ill_SVrefine2DISCOVARDovetail_12355:HG3_PB_SVrefine2PBcRDovetail_8670:HG3_Ill_SVrefine2DISCOVARDovetail_12580:HG2_PB_SVrefine2PBcRplusDovetail_5017:HG2_PB_SVrefine2PB10Xhap12_12948:HG2_PB_SVrefine2Falcon2Bionano_8715;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5466:HG4_Ill_SVrefine2DISCOVARDovetail_12355:HG3_PB_SVrefine2PBcRDovetail_8670:HG3_Ill_SVrefine2DISCOVARDovetail_12580:HG2_PB_SVrefine2PBcRplusDovetail_5017:HG2_PB_SVrefine2PB10Xhap12_12948:HG2_PB_SVrefine2Falcon2Bionano_8715;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0163934;ClusterMaxSizeDiff=0.0163934;ClusterMaxEditDist=0.0819672;PBcalls=8;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-122;DistBack=6564;DistForward=-123;DistMin=-123;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=363;REFWIDENED=19:2332897-2333381;PctSeqSimilarity=0.9561;PctSizeSimilarity=0.9918;PctRecOverlap=0.1707;SizeDiff=1;StartDistance=-102;EndDistance=-101;GTMatch=0;TruScore=70;MatchId=1687.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:24:0|1:12:2:2:20:0/0:9:0:11:0:0/0:19:0:./.:.:.:.:.:.
chr19	2674194	HG2_Ill_svaba_21877	CAGAGGTTGCGGTGAGCCGAGATCACCCCACTGCACTCTAGCCTGAGCAACAGAGTGAGACTCCATCTCAAAAACAAAACAAACAAGAA	C	20	PASS	ClusterIDs=HG3_PB_pbsv_17510:HG3_PB_HySA_26794:HG2_PB_pbsv_17807:HG2_PB_HySA_32344:HG2_PB_assemblyticsfalcon_12098:HG2_PB_assemblyticsPBcR_11716:HG3_PB_assemblyticsfalcon_12160:HG3_PB_SVrefine2Falcon1Dovetail_11061:HG3_Ill_svaba_22096:HG3_Ill_scalpel_16854:HG3_Ill_manta_3894:HG3_Ill_SVrefine2DISCOVARDovetail_12584:HG3_Ill_Krunchall_23273:HG3_Ill_GATKHC_27920:HG3_Ill_GATKHCSBGrefine_11542:HG3_Ill_250bpfermikitraw_22697:HG3_Ill_150bpfermikitraw_22039:HG2_PB_SVrefine2PBcRplusDovetail_5023:HG2_PB_SVrefine2PB10Xhap12_12956:HG2_PB_SVrefine2Falcon1plusDovetail_5471:HG2_Ill_svaba_21877:HG2_Ill_scalpel_16505:HG2_Ill_manta_4745:HG2_Ill_breakscan11_2556:HG2_Ill_SpiralSDKrefine_7622:HG2_Ill_Krunchall_23681:HG2_Ill_GATKHC_28025:HG2_Ill_GATKHCSBGrefine_11646:HG2_Ill_250bpfermikitraw_23363:HG2_Ill_150bpfermikitraw_22007:HG2_10X_allpass_2723:HG2_10X_SVrefine210Xhap12_12328:HG3_Ill_Spiral_18053:HG2_Ill_Spiral_1159;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12328:HG2_10X_allpass_2723:HG2_Ill_150bpfermikitraw_22007:HG2_Ill_250bpfermikitraw_23363:HG2_Ill_GATKHCSBGrefine_11646:HG2_Ill_GATKHC_28025:HG2_Ill_Krunchall_23681:HG2_Ill_SpiralSDKrefine_7622:HG2_Ill_breakscan11_2556:HG2_Ill_manta_4745:HG2_Ill_scalpel_16505:HG2_Ill_svaba_21877:HG2_PB_SVrefine2Falcon1plusDovetail_5471:HG2_PB_SVrefine2PB10Xhap12_12956:HG2_PB_SVrefine2PBcRplusDovetail_5023:HG3_Ill_150bpfermikitraw_22039:HG3_Ill_250bpfermikitraw_22697:HG3_Ill_GATKHCSBGrefine_11542:HG3_Ill_GATKHC_27920:HG3_Ill_Krunchall_23273:HG3_Ill_SVrefine2DISCOVARDovetail_12584:HG3_Ill_manta_3894:HG3_Ill_scalpel_16854:HG3_Ill_svaba_22096:HG3_PB_SVrefine2Falcon1Dovetail_11061:HG3_PB_assemblyticsfalcon_12160;NumExactMatchSVs=26;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.222222;PBcalls=11;Illcalls=21;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=0;HG2count=20;HG3count=14;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-88;DistBack=16812;DistForward=21911;DistMin=16812;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:2674195-2674283;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1688.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:36:0|1:23:0:2:35:1|0:0:19:46:1:0/1:36:33:./.:.:.:.:.:.
chr19	2805818	HG2_PB_HySA_32348	AGGGGACGGGCGGGTGCCCATCACTGCGGGGGGACGGGCGGGTGCCCATCACTGCGG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5807:HG3_PB_pbsv_17513:HG4_PB_assemblyticsfalcon_11965:HG2_PB_assemblyticsfalcon_12101:HG2_PB_pbsv_17809:HG3_Ill_250bpfermikitraw_22698:HG2_PB_HySA_32348:HG2_Ill_250bpfermikitraw_23364:HG3_PB_SVrefine2PBcRDovetail_8675;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23364:HG2_PB_HySA_32348:HG3_Ill_250bpfermikitraw_22698;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0350877;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.226087;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=3345;DistForward=5907;DistMin=3345;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=154;REFWIDENED=19:2805781-2805990;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1689.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:30:0|1:22:3:3:22:./.:0:2:1:1:./.:1:5:./.:.:.:.:.:.
chr19	2817666	HG3_PB_SVrefine2PBcRDovetail_8676	ATGACTAAGAACAGAGCAGGTGACCAAGGATAACTAAGGTCAGAGCAGGTGACAAGGGTGACTAAGAACAGAGCAGGTGACCAAGGATAACTAAGGTCAGAGCAGGTGACAAGGGTGACTAAGAACAGAGCAGGTGACCAAGGATAACTAAGGTCAGAGCAGGTGACCAAGGATAACTAAGGTCAGAGCAGGTGACCAAGGATGACTAAGGTCAGAGCAGGTGACAAGGGTGACTAAGAACAGAGCAGGTGACCAAGGATAACTAAGGTCAGAGCAGGTGACCAAGGATAACTAAGGTCAGAGCAGGTGACCAAGGATGACTAAGGTCAGAGCAGGTGACAAGGGTGACTAAGGTCAGAGCAGGTGACCAAGGATGACTAAGGTCAGAGCAGGTGACAAGGGTGACTAAGAACAGAGCAGGTGACCAAGGATAACTAAGGTCAGAGCAGGTGACAAGGG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_17515:HG2_PB_pbsv_17811:HG4_PB_SVrefine2Falcon1Dovetail_11064:HG3_10X_allpass_3360:HG3_PB_SVrefine2PBcRDovetail_8676:HG3_PB_SVrefine2Falcon1Dovetail_11065:HG2_PB_SVrefine2PBcRplusDovetail_5026:HG2_PB_SVrefine2Falcon2Bionano_8723:HG2_PB_SVrefine2Falcon1plusDovetail_5475:HG2_PB_SVrefine2PB10Xhap12_12960;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5475:HG2_PB_SVrefine2Falcon2Bionano_8723:HG2_PB_SVrefine2PBcRplusDovetail_5026:HG3_PB_SVrefine2Falcon1Dovetail_11065:HG3_PB_SVrefine2PBcRDovetail_8676:HG4_PB_SVrefine2Falcon1Dovetail_11064;NumExactMatchSVs=6;ClusterMaxShiftDist=0.300847;ClusterMaxSizeDiff=0.300847;ClusterMaxEditDist=0.305085;PBcalls=9;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-458;DistBack=5758;DistForward=-363;DistMin=-363;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=509;REFWIDENED=19:2817667-2818633;PctSeqSimilarity=0.9547;PctSizeSimilarity=0.9978;PctRecOverlap=0.2326;SizeDiff=-1;StartDistance=-352;EndDistance=-353;GTMatch=0;TruScore=72;MatchId=1690.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:30:0|1:33:0:2:27:./.:13:1:28:2:0/0:31:0:./.:27:2:.:.:.
chr19	2909259	HG3_PB_SVrefine2Falcon1Dovetail_11066	ATTTTATTTTATTTATTTTTGTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCTGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGACACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATAGTCTTGACGTCGTGATCCGCACGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCATGAGCCTCTGTGCCTGGCCGGTATCTTGTTTTAATTTGCATTTCCCTGATGACATGATGTGGAGCATTTTTTATATACTCATCTGCCATCTATATCTTCACAGATGAGTTGTCTTAAGGTCTTTAGCCTCCACACCTGGCTAATTTTTTCTTAATTTTAGAAATGGGGTCTCACTGTGTTGCCCAGGGTGATGTGAAACTCCTGAGCTCAAGCAATCCTCCCACCTTGGCCTCCCAACATGCTGGGATTACAGGCATGTGCCACCACACCTGGCCTATTTGTACATGCTTTACTCTACATCGCACTCTCCTGATGACTACAGCTCTCCAGAAAGCCTGGAAAATGCATAGTGTCAGTCTTCCAACTTGAACCTTCCCCTTCAATACTGTGTTGGTATTTTGAGTCTTTTACCTCTCCATATAAACTTTACAATCAGTTTGTCAATATCCACCAAATAACTTGCTGGGATTTTGATTGGGATTGTGTTGAATCTATAGATCAAGTTGGGAAGAACCAATGTCTTGACAATATTGGGTCTTCTATACGTGGACATGGAATAACTATTCACTTAGTTCTTTGATTTCTTCTGTCAGAGTTTTACAATTTTCCTAAGATCTTGTGCACATTTTGTTAGATTTATACCTGTATGTTTTATTTTAGGGCAATGCTGATTTAATTCCAGTATTGTCTAAGAGCATATGATGTACGATATTCTTTTAAACTTGTTAAGGTGTTTTATGTCCCAAAATACAGTCTAGGTTGAGGAGTGTTCCACGTGAGCTTGACAAGAATGTGTTTTCTGCTGTTGTTGAAGTTGTCTACAGACATTCATCATTGGGGGTGCTGTTGAATTCAACTCTGTGCTTATTGATGTTCCACGTGCTTGATCTGTTTC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8724:HG3_PB_SVrefine2PBcRDovetail_8677:HG3_10X_allpass_3361:HG3_Ill_GATKHCSBGrefine_11543:HG4_PB_HySA_25843:HG4_10X_allpass_3198:HG2_10X_allpass_2724:HG2_PB_pbsv_17812:HG3_PB_HySA_26798:HG3_PB_pbsv_17516:HG4_PB_pbsv_17727:HG2_PB_SVrefine2Falcon1plusDovetail_5476:HG4_PB_SVrefine2PBcRDovetail_8913:HG4_PB_SVrefine2Falcon1Dovetail_11065:HG4_Ill_SVrefine2DISCOVARDovetail_12363:HG3_PB_SVrefine2Falcon1Dovetail_11066:HG2_PB_SVrefine2PBcRplusDovetail_5027:HG2_PB_SVrefine2PB10Xhap12_12961;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8724:HG3_PB_SVrefine2Falcon1Dovetail_11066:HG2_PB_SVrefine2PBcRplusDovetail_5027:HG2_PB_SVrefine2PB10Xhap12_12961;NumExactMatchSVs=4;ClusterMaxShiftDist=0.288437;ClusterMaxSizeDiff=0.288437;ClusterMaxEditDist=0.289303;PBcalls=13;Illcalls=2;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-1186;DistBack=-440;DistForward=-1055;DistMin=-1055;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3736;REFWIDENED=19:2899425-2910445;PctSeqSimilarity=0.9035;PctSizeSimilarity=0.9949;PctRecOverlap=0.9503;SizeDiff=6;StartDistance=-59;EndDistance=-53;GTMatch=0;TruScore=94;MatchId=1691.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:40:./.:24:8:1:24:1|0:0:13:56:0:0/1:25:6:0/1:116:49:1661:.:.
chr19	3310037	HG2_Ill_GATKHCSBGrefine_11656	CCTCCCTCCCTCCATCCCTCTCTCCCTCCCTCCATCTCTCTCTCCTCCCTTCTCTCT	C	20	PASS	ClusterIDs=HG2_PB_HySA_32365:HG2_PB_pbsv_17823:HG2_PB_PB10Xdip_15123:HG4_Ill_svaba_21838:HG4_Ill_Krunchall_24051:HG4_Ill_GATKHC_28020:HG4_Ill_GATKHCSBGrefine_12025:HG4_Ill_250bpfermikitraw_23025:HG2_Ill_svaba_21885:HG2_Ill_GATKHC_28037:HG2_Ill_GATKHCSBGrefine_11657:HG2_Ill_150bpfermikitraw_22016:HG2_PB_assemblyticsPBcR_11731:HG4_PB_pbsv_17740:HG4_Ill_svaba_21837:HG4_Ill_scalpel_16128:HG4_Ill_GATKHC_28019:HG4_Ill_GATKHCSBGrefine_12024:HG4_Ill_250bpfermikitraw_23024:HG4_Ill_150bpfermikitraw_22133:HG3_Ill_svaba_22102:HG3_Ill_scalpel_16861:HG3_Ill_GATKHC_27934:HG3_Ill_GATKHCSBGrefine_11553:HG3_Ill_250bpfermikitraw_22706:HG2_Ill_svaba_21884:HG2_Ill_scalpel_16513:HG2_Ill_GATKHC_28036:HG2_Ill_GATKHCSBGrefine_11656:HG2_Ill_150bpfermikitraw_22015:HG4_PB_assemblyticsfalcon_11981:HG2_PB_assemblyticsfalcon_12113:HG3_PB_assemblyticsfalcon_12175:HG4_PB_HySA_25853;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22015:HG2_Ill_GATKHCSBGrefine_11656:HG2_Ill_GATKHC_28036:HG2_Ill_scalpel_16513:HG2_Ill_svaba_21884:HG2_PB_PB10Xdip_15123:HG4_Ill_svaba_21837:HG4_Ill_scalpel_16128:HG4_Ill_GATKHC_28019:HG4_Ill_GATKHCSBGrefine_12024:HG4_Ill_250bpfermikitraw_23024:HG4_Ill_150bpfermikitraw_22133:HG3_Ill_svaba_22102:HG3_Ill_scalpel_16861:HG3_Ill_GATKHC_27934:HG3_Ill_GATKHCSBGrefine_11553:HG3_Ill_250bpfermikitraw_22706;NumExactMatchSVs=17;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.234375;PBcalls=9;Illcalls=25;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=14;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=3994;DistForward=15;DistMin=15;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=43;REFWIDENED=19:3310036-3310137;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1692.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:32:./.:5:24:4:4:./.:3:31:2:26:1/1:1:12:./.:.:.:.:.:.
chr19	3311159	HG2_PB_SVrefine2Falcon2Bionano_8733	ATATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCATCTCTCTCTCCATCTCTCCATCTCTCCCTCTATCTCCCTGTCTCCATCTCTCCATCTCCCTCTCCATATCTCTCTCTC	A	20	PASS	ClusterIDs=HG2_PB_HySA_32366:HG4_Ill_GATKHC_28021:HG3_PB_HySA_26811:HG2_PB_assemblyticsfalcon_12114:HG4_PB_SVrefine2Falcon1Dovetail_11076:HG4_PB_assemblyticsfalcon_11982:HG4_PB_SVrefine2PBcRDovetail_8922:HG4_PB_pbsv_17741:HG4_Ill_GATKHC_28022:HG4_Ill_GATKHCSBGrefine_12027:HG4_PB_HySA_25854:HG3_PB_SVrefine2PBcRDovetail_8684:HG3_Ill_SVrefine2DISCOVARDovetail_12590:HG3_Ill_GATKHC_27937:HG4_Ill_GATKHCSBGrefine_12026:HG2_PB_SVrefine2Falcon2Bionano_8733:HG2_Ill_GATKHC_28038:HG2_Ill_GATKHCSBGrefine_11658:HG2_PB_assemblyticsPBcR_11732:HG2_PB_SVrefine2PBcRplusDovetail_5038:HG2_PB_SVrefine2PB10Xhap12_12973:HG3_PB_assemblyticsfalcon_12176:HG3_PB_SVrefine2Falcon1Dovetail_11076:HG3_Ill_GATKHC_27936:HG3_Ill_GATKHCSBGrefine_11554:HG2_PB_SVrefine2Falcon1plusDovetail_5487:HG2_Ill_manta_4748:HG3_PB_pbsv_17527:HG2_PB_pbsv_17824;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11658:HG2_Ill_GATKHC_28038:HG2_PB_SVrefine2Falcon2Bionano_8733:HG4_Ill_GATKHCSBGrefine_12026:HG4_Ill_GATKHC_28021;NumExactMatchSVs=5;ClusterMaxShiftDist=0.313433;ClusterMaxSizeDiff=0.313433;ClusterMaxEditDist=0.313433;PBcalls=18;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-134;DistBack=25;DistForward=1892;DistMin=25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:3311158-3311295;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=1693.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:11:40:1/1:6:25:2:7:./.:8:21:10:26:0/1:3:14:./.:.:.:.:.:.
chr19	3444077	HG2_PB_SVrefine2Falcon1plusDovetail_5489	ACGGGGTGATGAGGGCCTTTTGTCAAATACAAAGAGGAGGTCAGATGGGCGTGTGTGACAAATGGCTGCTCCGACGGGGTGATGAGGGCCTTTTGTCAAATAGAGGAGGTCAGATGGGCGTGTGTGACAAATGGCTGCTCCGT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8735:HG4_Ill_Krunchall_24054:HG2_Ill_Krunchall_23692:HG4_PB_HySA_25857:HG2_Ill_breakscan11_2560:HG4_PB_pbsv_17743:HG2_PB_assemblyticsfalcon_12117:HG4_Ill_svaba_21843:HG4_Ill_SVrefine2DISCOVARDovetail_12376:HG4_Ill_GATKHC_28026:HG4_Ill_GATKHCSBGrefine_12028:HG4_Ill_250bpfermikitraw_23028:HG4_10X_allpass_3200:HG2_PB_SVrefine2PB10Xhap12_12976:HG2_PB_SVrefine2Falcon1plusDovetail_5489:HG2_Ill_svaba_21888:HG2_Ill_SVrefine2DISCOVARplusDovetail_5821:HG2_Ill_GATKHC_28041:HG2_Ill_GATKHCSBGrefine_11660:HG2_10X_allpass_2726:HG2_10X_SVrefine210Xhap12_12346:HG2_PB_pbsv_17825:HG4_PB_SVrefine2PBcRDovetail_8923;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12346:HG2_10X_allpass_2726:HG2_Ill_GATKHCSBGrefine_11660:HG2_Ill_GATKHC_28041:HG2_Ill_SVrefine2DISCOVARplusDovetail_5821:HG2_Ill_svaba_21888:HG2_PB_SVrefine2Falcon1plusDovetail_5489:HG2_PB_SVrefine2PB10Xhap12_12976:HG4_10X_allpass_3200:HG4_Ill_250bpfermikitraw_23028:HG4_Ill_GATKHCSBGrefine_12028:HG4_Ill_GATKHC_28026:HG4_Ill_SVrefine2DISCOVARDovetail_12376:HG4_Ill_svaba_21843;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0353357;ClusterMaxSizeDiff=0.0353357;ClusterMaxEditDist=0.0571429;PBcalls=8;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-142;DistBack=4725;DistForward=-122;DistMin=-122;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=73;REFWIDENED=19:3444061-3444275;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1694.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:26:./.:16:10:3:10:0|1:17:1:0:9:0/1:28:31:./.:.:.:.:.:.
chr19	3581003	HG3_Ill_SVrefine2DISCOVARDovetail_12594	CCCAGGATGATCTTGAACTCCTGGCTCAAGTGTCCTGCTGCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTGTGCCCGCCCACCTCCATCCCACACTGCTTCTTCTTCTTCTTTTTCTTTTTTTTTTCAGACAGAGTTTCACTCATGTCACCCAGGCCGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCCACCATCCAGGTTCAAGCGATTCTCCTGCCCCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACCACCATGTCTGGCTAATTTTTTATATTTTAGTAGAGATGTGATTTCACCATGTCAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12351:HG3_PB_pbsv_17529:HG3_Ill_GATKHCSBGrefine_11556:HG2_Ill_GATKHCSBGrefine_11661:HG2_PB_pbsv_17826:HG2_Ill_manta_4752:HG3_Ill_Spiral_18062:HG2_Ill_tnscope_1888:HG3_Ill_MetaSV_2378:HG2_Ill_SpiralSDKrefine_7632:HG2_PB_HySA_32371:HG3_PB_SVrefine2PBcRDovetail_8686:HG3_Ill_SVrefine2DISCOVARDovetail_12594:HG2_PB_SVrefine2Falcon1plusDovetail_5490:HG2_Ill_SVrefine2DISCOVARplusDovetail_5822;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12351:HG3_PB_SVrefine2PBcRDovetail_8686:HG3_Ill_SVrefine2DISCOVARDovetail_12594:HG2_PB_SVrefine2Falcon1plusDovetail_5490:HG2_Ill_SVrefine2DISCOVARplusDovetail_5822;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0492308;ClusterMaxSizeDiff=0.0492308;ClusterMaxEditDist=0.0620155;PBcalls=5;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-327;DistBack=-379;DistForward=-249;DistMin=-379;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=90;REFWIDENED=19:3581004-3581420;PctSeqSimilarity=0.9424;PctSizeSimilarity=0.9909;PctRecOverlap=0.861;SizeDiff=-3;StartDistance=-43;EndDistance=-46;GTMatch=0;TruScore=93;MatchId=1695.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:28:26:0|1:25:2:2:22:./.:4:4:29:0:0/1:50:6:./.:24:2:.:.:.
chr19	3711051	HG2_10X_allpass_2727	GCCACCACACCCGGCTAATTTTTTGTATTTTTAGTACAGACGGGGTTTCACCGTGGTAGCCAAGATGGTCTCTCCTGACCTTGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCTTATTTTATTTTTTTTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGAACGATCTCCGCTCGCTGCAACCTCCACCTCCTGGGTTCAAAGCGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCCCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12355:HG3_PB_assemblyticsfalcon_12182:HG2_PB_assemblyticsfalcon_12120:HG3_PB_SVrefine2Falcon1Dovetail_11079:HG2_PB_SVrefine2PB10Xhap12_12980:HG2_PB_SVrefine2Falcon1plusDovetail_5492:HG4_PB_HySA_25859:HG2_PB_PB10Xdip_15170:HG2_PB_SVrefine2PB10Xhap12_12979:HG3_PB_HySA_26814:HG4_Ill_MetaSV_2303:HG3_Ill_MetaSV_2379:HG4_PB_pbsv_17746:HG4_Ill_scalpel_16133:HG4_Ill_GATKHCSBGrefine_12029:HG4_10X_allpass_3201:HG3_Ill_scalpel_16866:HG3_Ill_GATKHCSBGrefine_11557:HG2_Ill_MetaSV_2235:HG2_Ill_GATKHCSBGrefine_11662:HG2_10X_allpass_2727:HG2_PB_pbsv_17829:HG3_PB_pbsv_17532:HG4_PB_SVrefine2PBcRDovetail_8924:HG4_PB_SVrefine2Falcon1Dovetail_11077:HG4_Ill_SVrefine2DISCOVARDovetail_12378:HG3_Ill_SVrefine2DISCOVARDovetail_12595:HG2_PB_SVrefine2PBcRplusDovetail_5040:HG2_Ill_SVrefine2DISCOVARplusDovetail_5825;NumClusterSVs=29;ExactMatchIDs=HG2_10X_allpass_2727:HG2_Ill_GATKHCSBGrefine_11662:HG2_Ill_MetaSV_2235:HG3_Ill_GATKHCSBGrefine_11557:HG3_Ill_scalpel_16866:HG4_10X_allpass_3201:HG4_Ill_GATKHCSBGrefine_12029:HG4_Ill_scalpel_16133:HG4_PB_pbsv_17746;NumExactMatchSVs=9;ClusterMaxShiftDist=0.318471;ClusterMaxSizeDiff=0.318471;ClusterMaxEditDist=0.37299;PBcalls=15;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-295;DistBack=-296;DistForward=-152;DistMin=-296;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=296;REFWIDENED=19:3710906-3711496;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1696.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:0|1:20:0:4:27:0|1:31:0:0:10:0/1:46:17:./.:.:.:.:.:.
chr19	3972951	HG2_PB_SVrefine2PB10Xhap12_12984	GGTGGCTAACGCCTGTAATTCCAGCATTTTGGGAGGCCACGGTGGGCAGATCACGAAGTCAGGACATCAAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAATAAATACAAAAAATTAGCCGGGCATGGTGGCGGGTGCCTGTAGTCCCGGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATTGAGCCACTGCACTCCAGCCTGGGTGACAGAGCAAAGACTGTCTCAAAAAAAAAAAAAAATTCAGCTTCCACATACCATCTTAACGTTTGCACTACTAAAAAAGAATAGGACCCGGTATGGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGCTGAGGCGGGCTGATCTCTTACGGTCGAGCTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCACCTAAATATACAAAAATTACACAGACCTGGTGATAGGCGCCTGTAATTCCAGCTACTCGGGAGGCTGAAGCACAAGAATTGCTTGAGCACTTGAATCCGGAGGCAGAGGCTATAGTGAGCCAAGATCACAACACTGCACTCCATCCTGGGCGATAGAGTGAGATTCTCGAAACACAGTAATCCGTTACCCTGACTGCTGGAAACAGCGTCAGTTACAGCCCCAATTCAAATGCGACAGCCAAACCAAACCTCAGGCATACCTACATGTGGGCAAAACCTCAGCTGAGGCTTGGCCTTGACAATGCAGGGCCAGAGCTGCCCCCGCCTTTGCCGAGAACCCCACAGCCCTACTTCACAGTCCCCACCTGCCTTCCTGAGGACAGAGTAAAAGGCGGAAAATGATCATGTTAACCTTATCAGCACTGACAAGATTAGGCCTCCTCACATCTTAGGCACTATTTAGAAAAACAAATAGTTTTCTAAGCTATTGGCGCTCACACCTGAAATCCCAGCACTTTGGGAGGCTGAGGCAGAAGGATCGCTTGAGCCCGGGAAGGAGACCAGCCTGAGCAACATAGTGAGACCCCATTACTACAAAAAAAGTAAAAATTAGGTCAGCACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12359:HG4_PB_pbsv_17752:HG3_PB_pbsv_17538:HG2_PB_pbsv_17834:HG3_PB_pbsv_17537:HG4_PB_HySA_25862:HG3_PB_HySA_26821:HG2_PB_HySA_32379:HG4_PB_SVrefine2PBcRDovetail_8926:HG4_PB_SVrefine2Falcon1Dovetail_11080:HG4_Ill_SVrefine2DISCOVARDovetail_12381:HG3_PB_SVrefine2PBcRDovetail_8691:HG3_Ill_SVrefine2DISCOVARDovetail_12599:HG2_PB_SVrefine2PBcRplusDovetail_5045:HG2_PB_SVrefine2PB10Xhap12_12984:HG2_PB_SVrefine2Falcon2Bionano_8740:HG2_PB_SVrefine2Falcon1plusDovetail_5495:HG2_Ill_SVrefine2DISCOVARplusDovetail_5830;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12359:HG4_PB_SVrefine2PBcRDovetail_8926:HG4_PB_SVrefine2Falcon1Dovetail_11080:HG4_Ill_SVrefine2DISCOVARDovetail_12381:HG3_PB_SVrefine2PBcRDovetail_8691:HG3_Ill_SVrefine2DISCOVARDovetail_12599:HG2_PB_SVrefine2PBcRplusDovetail_5045:HG2_PB_SVrefine2PB10Xhap12_12984:HG2_PB_SVrefine2Falcon2Bionano_8740:HG2_PB_SVrefine2Falcon1plusDovetail_5495:HG2_Ill_SVrefine2DISCOVARplusDovetail_5830;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00468165;ClusterMaxSizeDiff=0.00467071;ClusterMaxEditDist=0.017757;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1071;DistBack=8490;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1147;REFWIDENED=19:3972952-3975169;PctSeqSimilarity=0.9804;PctSizeSimilarity=0.9991;PctRecOverlap=0.6194;SizeDiff=1;StartDistance=-408;EndDistance=-407;GTMatch=0;TruScore=86;MatchId=1697.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:38:1/1:2:22:0:9:0/0:11:0:30:0:0/0:50:0:0/1:16:44:.:3135:.
chr19	4786641	HG4_Ill_scalpel_16144	GTTGGAGGGAGGGAGGAGGTTGGAGGGAGGGACGAGGTTGGAGGGAGGGAGGAGGTTGGAGGGAGGAGGTTGGAGGGAGGGAGGAGATTGGAGGCAGGAGGTTGGAGGGAGGAGC	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8699:HG2_PB_pbsv_17850:HG2_PB_assemblyticsfalcon_12142:HG3_PB_pbsv_17554:HG4_PB_pbsv_17770:HG4_PB_SVrefine2PBcRDovetail_8936:HG4_PB_SVrefine2Falcon1Dovetail_11090:HG4_Ill_scalpel_16144:HG4_Ill_GATKHC_28049:HG3_PB_assemblyticsfalcon_12206:HG3_Ill_scalpel_16874:HG3_Ill_GATKHC_27964:HG2_PB_assemblyticsPBcR_11764:HG2_PB_SVrefine2PBcRplusDovetail_5053:HG2_PB_SVrefine2Falcon2Bionano_8747:HG2_PB_SVrefine2Falcon1plusDovetail_5503:HG2_Ill_scalpel_16527:HG2_Ill_GATKHC_28062:HG4_PB_assemblyticsfalcon_12009:HG2_Ill_SVrefine2DISCOVARplusDovetail_5841:HG4_Ill_SVrefine2DISCOVARDovetail_12389:HG2_10X_SVrefine210Xhap12_12374:HG3_PB_HySA_26838;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHC_28062:HG2_Ill_scalpel_16527:HG2_PB_SVrefine2Falcon1plusDovetail_5503:HG2_PB_SVrefine2Falcon2Bionano_8747:HG2_PB_SVrefine2PBcRplusDovetail_5053:HG2_PB_assemblyticsPBcR_11764:HG3_Ill_GATKHC_27964:HG3_Ill_scalpel_16874:HG3_PB_assemblyticsfalcon_12206:HG4_Ill_GATKHC_28049:HG4_Ill_scalpel_16144:HG4_PB_SVrefine2Falcon1Dovetail_11090:HG4_PB_SVrefine2PBcRDovetail_8936;NumExactMatchSVs=13;ClusterMaxShiftDist=0.390438;ClusterMaxSizeDiff=0.390438;ClusterMaxEditDist=0.390438;PBcalls=14;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-114;DistBack=57;DistForward=-99;DistMin=-99;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=218;REFWIDENED=19:4786467-4786798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1699.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:11:20:./.:11:6:0:13:./.:25:4:0:19:0/1:6:5:./.:.:.:.:.:.
chr19	6152295	HG2_Ill_GATKHCSBGrefine_11677	TTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGGCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2242:HG3_PB_assemblyticsfalcon_12231:HG2_PB_assemblyticsfalcon_12161:HG2_PB_assemblyticsPBcR_11784:HG4_PB_assemblyticsfalcon_12032:HG4_PB_pbsv_17782:HG2_PB_pbsv_17864:HG2_PB_SVrefine2PBcRplusDovetail_5063:HG2_PB_SVrefine2PB10Xhap12_13006:HG2_PB_SVrefine2Falcon2Bionano_8758:HG2_PB_SVrefine2Falcon1plusDovetail_5514:HG4_PB_SVrefine2Falcon1Dovetail_11100:HG4_Ill_GATKHCSBGrefine_12046:HG3_PB_pbsv_17571:HG3_PB_SVrefine2PBcRDovetail_8709:HG3_Ill_scalpel_16889:HG3_Ill_SVrefine2DISCOVARDovetail_12625:HG3_Ill_GATKHCSBGrefine_11574:HG2_PB_HySA_32426:HG2_Ill_scalpel_16536:HG2_Ill_GATKHCSBGrefine_11677:HG2_10X_SVrefine210Xhap12_12389:HG3_PB_HySA_26865:HG2_Ill_Spiral_1162;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12389:HG2_Ill_GATKHCSBGrefine_11677:HG2_Ill_scalpel_16536:HG2_PB_HySA_32426:HG3_Ill_GATKHCSBGrefine_11574:HG3_Ill_SVrefine2DISCOVARDovetail_12625:HG3_Ill_scalpel_16889:HG3_PB_SVrefine2PBcRDovetail_8709:HG3_PB_pbsv_17571:HG4_Ill_GATKHCSBGrefine_12046:HG4_PB_SVrefine2Falcon1Dovetail_11100;NumExactMatchSVs=11;ClusterMaxShiftDist=0.127168;ClusterMaxSizeDiff=0.127168;ClusterMaxEditDist=0.127168;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-267;DistBack=-268;DistForward=10611;DistMin=-268;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=19:6152342-6162316;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1702.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:44:1/1:1:14:0:11:1/1:0:8:0:12:1/1:0:18:./.:.:.:.:.:.
chr19	6163199	HG2_Ill_scalpel_16537	ACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCATGAGGTCAGGAGGTACAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCTGGGCATGGTGGCATGCGCCTGTAGTCCCAGCTGCTCAGGAGGCTGAGGCAGGGGAATCACTTGAACCCGGGAAGCGGAGGTTGCAGTGAGCCGAGATAGTGCCACTGCACTCAAGCCTGGCGAAAGAGCGAGACTCCATCTAAAAAAAAAAAGGCTGGGTGTGGTGGCTCATG	A	20	PASS	ClusterIDs=HG3_Ill_Krunchall_23319:HG2_Ill_Krunchall_23717:HG4_PB_pbsv_17783:HG4_PB_HySA_25896:HG2_PB_pbsv_17865:HG3_PB_pbsv_17572:HG4_Ill_MetaSV_2312:HG3_PB_HySA_26866:HG3_Ill_MetaSV_2390:HG2_Ill_MetaSV_2244:HG4_Ill_GATKHCSBGrefine_12047:HG3_Ill_scalpel_16890:HG3_Ill_manta_3900:HG3_Ill_GATKHCSBGrefine_11575:HG3_10X_allpass_3366:HG2_Ill_scalpel_16537:HG2_Ill_manta_4756:HG2_Ill_breakscan11_2566:HG2_Ill_GATKHCSBGrefine_11678:HG2_10X_allpass_2728:HG4_PB_assemblyticsfalcon_12033:HG2_Ill_tnscope_1891:HG4_PB_SVrefine2PBcRDovetail_8947:HG4_PB_SVrefine2Falcon1Dovetail_11101:HG4_Ill_SVrefine2DISCOVARDovetail_12402:HG3_PB_SVrefine2PBcRDovetail_8710:HG3_Ill_SVrefine2DISCOVARDovetail_12626:HG2_PB_SVrefine2PBcRplusDovetail_5064:HG2_PB_SVrefine2PB10Xhap12_13007:HG2_PB_SVrefine2Falcon2Bionano_8759:HG2_PB_SVrefine2Falcon1plusDovetail_5515:HG2_10X_SVrefine210Xhap12_12390:HG4_Ill_MetaSV_2311;NumClusterSVs=33;ExactMatchIDs=HG2_10X_allpass_2728:HG2_Ill_GATKHCSBGrefine_11678:HG2_Ill_breakscan11_2566:HG2_Ill_manta_4756:HG2_Ill_scalpel_16537:HG3_10X_allpass_3366:HG3_Ill_GATKHCSBGrefine_11575:HG3_Ill_manta_3900:HG3_Ill_scalpel_16890:HG4_Ill_GATKHCSBGrefine_12047;NumExactMatchSVs=10;ClusterMaxShiftDist=0.118846;ClusterMaxSizeDiff=0.118846;ClusterMaxEditDist=0.118846;PBcalls=13;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-291;DistBack=-367;DistForward=-79;DistMin=-367;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=224;REFWIDENED=19:6163190-6163704;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1703.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:46:1/1:2:27:1:5:1/1:0:10:0:9:1/1:0:49:./.:.:.:.:.:.
chr19	6355682	HG2_PB_SVrefine2PBcRplusDovetail_5066	GGCGCCTCTGCCCGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGT	TG	10	PASS	ClusterIDs=HG4_PB_pbsv_17786:HG2_PB_assemblyticsPBcR_11788:HG2_PB_SVrefine2PBcRplusDovetail_5066:HG2_PB_pbsv_17868;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5066:HG2_PB_assemblyticsPBcR_11788;NumExactMatchSVs=2;ClusterMaxShiftDist=0.015748;ClusterMaxSizeDiff=0.00787402;ClusterMaxEditDist=0.0551181;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-125;DistBack=-25;DistForward=-115;DistMin=-115;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=276;REFWIDENED=19:6355507-6355907;PctSeqSimilarity=0.9604;PctSizeSimilarity=0.9921;PctRecOverlap=0.6142;SizeDiff=-1;StartDistance=49;EndDistance=49;GTMatch=0;TruScore=85;MatchId=1704.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:15:./.:21:1:14:12:./.:27:0:1:1:0/0:27:0:./.:.:.:.:.:.
chr19	6693855	HG2_PB_SVrefine2PB10Xhap12_13011	AAGGGTGTGGCCTTGAGAAGATGTGGGGACCCAGGGGATGGGCGTGGCCTTGAAAAGAGGCAGGGTCTCGAGATTCTGGCCTGGGAGGAGTCAGGGCCTCAGAGGGCGTGGCCTTGAGAAGAGGTGGGAGGCCCTCAGGGGATGGGCATGGCCTTGAGGAGAGGCGGGGTCTCATGAAGAGCCTGGCCTGGGAGGAGTCAGGGCCTCAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12397:HG2_PB_HySA_32432:HG2_PB_SVrefine2PB10Xhap12_13012:HG2_PB_PB10Xdip_16148:HG2_PB_SVrefine2Falcon1plusDovetail_5518:HG2_PB_pbsv_17875:HG2_Ill_breakscan11_2567:HG2_10X_allpass_2729:HG3_PB_pbsv_17578:HG3_Ill_SVrefine2DISCOVARDovetail_12631:HG2_PB_SVrefine2PBcRplusDovetail_5068:HG2_PB_SVrefine2PB10Xhap12_13011:HG2_PB_SVrefine2Falcon2Bionano_8762:HG2_Ill_SVrefine2DISCOVARplusDovetail_5858;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12397:HG3_Ill_SVrefine2DISCOVARDovetail_12631:HG2_PB_SVrefine2PBcRplusDovetail_5068:HG2_PB_SVrefine2PB10Xhap12_13011:HG2_PB_SVrefine2Falcon2Bionano_8762:HG2_Ill_SVrefine2DISCOVARplusDovetail_5858;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0974478;ClusterMaxSizeDiff=0.0974478;ClusterMaxEditDist=0.165485;PBcalls=9;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-208;DistBack=4551;DistForward=-135;DistMin=-135;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=241;REFWIDENED=19:6693856-6694304;PctSeqSimilarity=0.9038;PctSizeSimilarity=0.972;PctRecOverlap=0.6279;SizeDiff=-6;StartDistance=-74;EndDistance=-80;GTMatch=0;TruScore=83;MatchId=1705.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:36:./.:26:16:6:18:./.:10:2:13:0:0/0:27:0:./.:.:.:.:.:.
chr19	6948992	HG3_Ill_scalpel_16895	ATATATATGCACATTATATATATATACACATTATATATATATACATTATATATATACACAATATATATACATTATATATATACAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_17580:HG3_Ill_scalpel_16896:HG3_Ill_Krunchall_23329:HG2_Ill_Krunchall_23727:HG2_PB_pbsv_17878:HG3_Ill_manta_3901:HG3_PB_HySA_26880:HG2_PB_PB10Xdip_16153:HG2_Ill_SpiralSDKrefine_7659:HG3_Ill_svaba_22148:HG3_Ill_scalpel_16895:HG3_Ill_250bpfermikitraw_22753:HG3_Ill_150bpfermikitraw_22086:HG3_10X_allpass_3367:HG2_Ill_svaba_21921:HG2_Ill_scalpel_16544:HG2_Ill_250bpfermikitraw_23411:HG2_Ill_150bpfermikitraw_22052:HG2_10X_allpass_2730:HG3_Ill_Krunchall_23328:HG2_Ill_Krunchall_23726:HG2_Ill_manta_4758;NumClusterSVs=22;ExactMatchIDs=HG2_10X_allpass_2730:HG2_Ill_150bpfermikitraw_22052:HG2_Ill_250bpfermikitraw_23411:HG2_Ill_scalpel_16544:HG2_Ill_svaba_21921:HG3_10X_allpass_3367:HG3_Ill_150bpfermikitraw_22086:HG3_Ill_250bpfermikitraw_22753:HG3_Ill_scalpel_16895:HG3_Ill_svaba_22148;NumExactMatchSVs=10;ClusterMaxShiftDist=0.297297;ClusterMaxSizeDiff=0.297297;ClusterMaxEditDist=0.297297;PBcalls=4;Illcalls=16;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-84;DistBack=-16;DistForward=-78;DistMin=-78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=59;REFWIDENED=19:6948941-6949083;PctSeqSimilarity=0.8403;PctSizeSimilarity=0.7738;PctRecOverlap=0.7765;SizeDiff=19;StartDistance=-6;EndDistance=13;GTMatch=0;TruScore=79;MatchId=1706.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:38:0|1:25:5:0:31:./.:1:13:25:2:0/1:39:22:./.:.:.:.:.:.
chr19	6987463	HG2_Ill_GATKHCSBGrefine_11685	AAAGGAATGAAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGTGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1892:HG2_10X_allpass_2731:HG4_10X_allpass_3209:HG2_PB_HySA_32439:HG4_PB_pbsv_17795:HG2_PB_pbsv_17879:HG4_Ill_manta_4045:HG4_Ill_SVrefine2DISCOVARDovetail_12408:HG4_Ill_GATKHCSBGrefine_12057:HG2_PB_SVrefine2PB10Xhap12_13014:HG2_Ill_scalpel_16545:HG2_Ill_MetaSV_2246:HG2_Ill_GATKHCSBGrefine_11685:HG4_PB_SVrefine2PBcRDovetail_8953:HG4_Ill_Spiral_1373:HG4_Ill_MetaSV_2316:HG4_PB_SVrefine2Falcon1Dovetail_11107:HG4_PB_HySA_25913:HG3_PB_SVrefine2Falcon1Dovetail_11085;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11685:HG2_Ill_MetaSV_2246:HG2_Ill_scalpel_16545:HG2_PB_SVrefine2PB10Xhap12_13014:HG4_Ill_GATKHCSBGrefine_12057:HG4_Ill_SVrefine2DISCOVARDovetail_12408:HG4_Ill_manta_4045;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0651163;ClusterMaxSizeDiff=0.0651163;ClusterMaxEditDist=0.0651163;PBcalls=8;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-329;DistBack=36434;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=19:6987464-6987809;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1707.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:0|1:27:0:2:25:./.:20:0:1:12:0/1:29:17:0/1:30:11:.:.:.
chr19	7647791	HG3_Ill_GATKHCSBGrefine_11586	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_17891:HG3_Ill_svaba_22169:HG2_Ill_svaba_21943:HG2_Ill_Krunchall_23744:HG3_Ill_manta_3902:HG3_Ill_svaba_22168:HG3_Ill_Krunchall_23345:HG3_Ill_GATKHC_28014:HG3_Ill_GATKHCSBGrefine_11586:HG3_Ill_250bpfermikitraw_22768:HG3_Ill_150bpfermikitraw_22098:HG2_Ill_svaba_21942:HG2_Ill_GATKHC_28107:HG2_Ill_GATKHCSBGrefine_11688:HG2_Ill_150bpfermikitraw_22066;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22066:HG2_Ill_GATKHCSBGrefine_11688:HG2_Ill_GATKHC_28107:HG2_Ill_svaba_21942:HG3_Ill_150bpfermikitraw_22098:HG3_Ill_250bpfermikitraw_22768:HG3_Ill_GATKHCSBGrefine_11586:HG3_Ill_GATKHC_28014:HG3_Ill_Krunchall_23345:HG3_Ill_svaba_22168;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0186916;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.0550459;PBcalls=1;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-53;DistBack=25564;DistForward=-34;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=19:7647790-7647845;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:19:0|1:21:1:1:17:./.:0:12:15:1:0/1:20:12:./.:.:.:.:.:.
chr19	7935794	HG4_Ill_GATKHCSBGrefine_12061	TGGGGTGTGGTCAGGGGAGCAGAAGCTGTCTGCAGAGGAGGCGGGGCTAGAGAAGGTAGGTTCTCCAGAG	T	20	PASS	ClusterIDs=HG3_PB_pbsv_17598:HG4_PB_pbsv_17807:HG4_PB_HySA_25939:HG2_PB_pbsv_17897:HG4_PB_assemblyticsfalcon_12062:HG4_Ill_svaba_21908:HG4_Ill_GATKHCSBGrefine_12061:HG4_Ill_250bpfermikitraw_23082:HG4_Ill_150bpfermikitraw_22190:HG3_PB_HySA_26904:HG3_Ill_svaba_22174:HG3_Ill_GATKHCSBGrefine_11588:HG3_Ill_250bpfermikitraw_22771:HG3_Ill_150bpfermikitraw_22101:HG2_Ill_svaba_21947:HG2_Ill_GATKHCSBGrefine_11690:HG2_Ill_250bpfermikitraw_23430;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23430:HG2_Ill_GATKHCSBGrefine_11690:HG2_Ill_svaba_21947:HG3_Ill_150bpfermikitraw_22101:HG3_Ill_250bpfermikitraw_22771:HG3_Ill_GATKHCSBGrefine_11588:HG3_Ill_svaba_22174:HG3_PB_HySA_26904:HG4_Ill_150bpfermikitraw_22190:HG4_Ill_250bpfermikitraw_23082:HG4_Ill_GATKHCSBGrefine_12061:HG4_Ill_svaba_21908:HG4_PB_assemblyticsfalcon_12062;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0425532;ClusterMaxSizeDiff=0.0425532;ClusterMaxEditDist=0.0425532;PBcalls=6;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-69;DistBack=24;DistForward=6958;DistMin=24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=84;REFWIDENED=19:7935793-7935948;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1711.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:0|1:20:3:5:17:./.:0:1:8:1:0/1:8:9:./.:.:.:.:.:.
chr19	8242778	HG2_PB_SVrefine2PB10Xhap12_13025	AGACAGAGTCTCTGTCTGTCACCCAGGCTGGAGTGCAAAGGTGTGATCTTGGCTCGCTGAAACCTCCGCCTCCTGGCTGCAAGCAATTCTGCTGCCTCAGCCTCCCGATTAGCTGGAAATACAGGCACCTGCCACCACGCCCAGCTAATTTTTGTATTTATATTGAAGACGGGATTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGAACTCAAGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACACCTGACCAAAGAGGTGTATTATTCTTTTGCAATTTCCTTTTAACCAGCTGGTTTTGTTATCTACTTCTGATTATGTCGCTGATACAGGCCATTTTCTGTTATCAGATCAAAAAGCAGCAAAGCCAGGCATAGTAGTGCACAACTATAGTCTCAGCTACTCAGGAGCCTGATGGGAGAATTGCTTGAGCCCAGATTGAGGCCACATTGAGCTGAGATGGCACTACCATACTCTAGCCTGGGTGACAGAGCGAGACCCTGTCTCAATTAAAAAAAGAAAAGAAAAGAAACAGGCCAGGCGCGGTGTCTCACGCCTGGAATCCCAGAACTTTAGGAGGCCGAGGCGGGTGGATCATTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTGTACTAAAAATACAAAAATTAGCCAGATATGGTGGCAGGCGCCTGTAATCCCAGCTACACAGGTTGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGACAGAGGTTGCAGTGAGCCGAGATTGCGCCATTGCACTCCAGCCTAGGTGACAGAGTGAGACTCCATCTCAAAAAACAAACAAACAAAGAAAACACAAAACTTTTATGGAATTCCAGAATCCTTTCTTCCTTCACTACTTCCTCTACTTTTGCTCTATTTCAAATTATTTATTTTTGACCTCATAATTTTTTGTGTGTGGATGGGTAGGCAGAATGAATTAACAGTACAAATCTTACCTCAAAGACTAGCTATAAAATAAGAAAAAGCGCCAAGCCAGAGTTTGAACTTCCAGGTTATAATACTGATTCTGTCATCAAACAGCTTTGTGACACCAAAGGAGTTTACTAAGTTCTTTGGATTTATTTATTATTATGTTAGATGGAGTGTCACTCTATTGCCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGCAACATCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGCGATTACAGGCATGTGCCACCTTGCCCAGCTAATTTTTGTCTTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGGTCTCTAGTGATTTGCCTGCCTTGGCCTCTCAGAGTACTGAGATTACAGACGTGAGCCACTGTGCCCAGCTGGAAATGGATTTTAAATCTCTGAGATGTGAAAGCATTTTCTAAGCTTAAGAGCAGAGGGCAAAATGGTCAAGCAATGTACTGAGTTGTCTCTCTTTAAAACTTAAAGAGGAATTCTTAGCCAGGTGCTGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGAGAGAATCACTTGAGCCCAGGAGTTTGAGACCAACTTGGGCAATGTAGTGAGACCACATCTCTGCAAAAAATAAAAATTAGCTGGGTATGGTCGCACATGCCTGTAATCCCACCTACTTGGGAAGCTGAGGTGGGAGGATCACTTGAACCCAGGAGGCTGAGGCTTCTGTGAGCTATGATAGTTCCACTGCACCCCAGCCTGGGCAACACAGTAAGACTCTATCTCTAAAAAAGAAAAGAGAATGAGACATCTTTTGTCTATTTTAATCTAACCTTTTTTTTTTTTTCCTGAAGACTCTTACCCCAGCTTGCAGCTTTTTTTTTTTTTTTTTTTTTTTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12415:HG2_PB_HySA_32477:HG4_10X_allpass_3212:HG2_10X_allpass_2732:HG4_Ill_MetaSV_2318:HG2_Ill_MetaSV_2250:HG4_PB_SVrefine2PBcRDovetail_8960:HG2_Ill_tnscope_1893:HG4_PB_pbsv_17815:HG2_PB_pbsv_17903:HG2_Ill_Krunchall_23750:HG2_PB_SVrefine2PBcRplusDovetail_5079:HG2_PB_SVrefine2PB10Xhap12_13025:HG2_PB_SVrefine2Falcon2Bionano_8771:HG2_PB_SVrefine2Falcon1plusDovetail_5530;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12415:HG2_PB_SVrefine2PBcRplusDovetail_5079:HG2_PB_SVrefine2PB10Xhap12_13025:HG2_PB_SVrefine2Falcon2Bionano_8771:HG2_PB_SVrefine2Falcon1plusDovetail_5530;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0483701;ClusterMaxSizeDiff=0.0483701;ClusterMaxEditDist=0.0662635;PBcalls=8;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-1946;DistBack=3704;DistForward=-1713;DistMin=-1713;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=266;REFWIDENED=19:8242779-8244990;PctSeqSimilarity=0.8974;PctSizeSimilarity=1;PctRecOverlap=0.8803;SizeDiff=0;StartDistance=-233;EndDistance=-233;GTMatch=0;TruScore=92;MatchId=1712.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:40:./.:32:8:6:16:0/0:33:0:41:0:0/0:65:0:0/1:182:57:1999:.:.
chr19	8514410	HG3_Ill_manta_3903	GCTAAGAGTCTCTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCGCTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG4_PB_HySA_25958:HG3_PB_assemblyticsfalcon_12273:HG4_PB_assemblyticsfalcon_12078:HG2_PB_assemblyticsfalcon_12207:HG2_PB_assemblyticsPBcR_11831:HG4_Ill_Krunchall_24115:HG2_Ill_Krunchall_23756:HG4_Ill_Spiral_1377:HG4_PB_pbsv_17817:HG3_PB_HySA_26917:HG3_PB_pbsv_17605:HG2_PB_pbsv_17906:HG2_PB_HySA_32487:HG4_Ill_MetaSV_2320:HG3_Ill_MetaSV_2398:HG2_Ill_tnscope_1894:HG2_Ill_MetaSV_2252:HG4_PB_SVrefine2PBcRDovetail_8963:HG4_PB_SVrefine2Falcon1Dovetail_11119:HG4_Ill_svaba_21912:HG4_Ill_scalpel_16180:HG4_Ill_manta_4049:HG4_Ill_SVrefine2DISCOVARDovetail_12421:HG4_Ill_GATKHCSBGrefine_12063:HG3_PB_SVrefine2PBcRDovetail_8725:HG3_PB_SVrefine2Falcon1Dovetail_11101:HG3_Ill_svaba_22185:HG3_Ill_scalpel_16920:HG3_Ill_manta_3903:HG3_Ill_SVrefine2DISCOVARDovetail_12644:HG3_Ill_GATKHCSBGrefine_11592:HG3_10X_allpass_3370:HG2_PB_SVrefine2PBcRplusDovetail_5083:HG2_PB_SVrefine2PB10Xhap12_13028:HG2_PB_SVrefine2Falcon2Bionano_8774:HG2_PB_SVrefine2Falcon1plusDovetail_5532:HG2_Ill_svaba_21953:HG2_Ill_scalpel_16563:HG2_Ill_manta_4760:HG2_Ill_SpiralSDKrefine_7678:HG2_Ill_SVrefine2DISCOVARplusDovetail_5869:HG2_Ill_GATKHCSBGrefine_11691:HG2_10X_SVrefine210Xhap12_12417:HG2_Ill_breakscan11_2568;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12417:HG2_Ill_GATKHCSBGrefine_11691:HG2_Ill_SVrefine2DISCOVARplusDovetail_5869:HG2_Ill_SpiralSDKrefine_7678:HG2_Ill_manta_4760:HG2_Ill_scalpel_16563:HG2_Ill_svaba_21953:HG2_PB_SVrefine2Falcon1plusDovetail_5532:HG2_PB_SVrefine2Falcon2Bionano_8774:HG2_PB_SVrefine2PB10Xhap12_13028:HG2_PB_SVrefine2PBcRplusDovetail_5083:HG3_10X_allpass_3370:HG3_Ill_GATKHCSBGrefine_11592:HG3_Ill_SVrefine2DISCOVARDovetail_12644:HG3_Ill_manta_3903:HG3_Ill_scalpel_16920:HG3_Ill_svaba_22185:HG3_PB_SVrefine2Falcon1Dovetail_11101:HG3_PB_SVrefine2PBcRDovetail_8725:HG4_Ill_GATKHCSBGrefine_12063:HG4_Ill_SVrefine2DISCOVARDovetail_12421:HG4_Ill_manta_4049:HG4_Ill_scalpel_16180:HG4_Ill_svaba_21912:HG4_PB_SVrefine2Falcon1Dovetail_11119:HG4_PB_SVrefine2PBcRDovetail_8963;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0963455;ClusterMaxSizeDiff=0.0963455;ClusterMaxEditDist=0.0963455;PBcalls=18;Illcalls=24;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=2;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-307;DistBack=8094;DistForward=-293;DistMin=-293;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=19:8514411-8514732;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1714.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:1:31:0:19:1/1:0:21:0:20:1/1:0:43:./.:2:18:.:.:.
chr19	8772903	HG3_PB_SVrefine2Falcon1Dovetail_11104	GGCTGGTGGCAGTGGGGGATGGAACTGCCATGAACTGAGGTGGGGAAGGTGGAGGGGGAGCTGGTGGTGGGGAGGGGTGGAACTGCCATGAACTGAGATGGGGAAGGTGGAGGGGACGCTGGTGGTGGGGAGGGGTGGAACTGCCATGAACTGAGATGGGGAAGGTGGAGGGGGCGCTGGTGGTGGGGAGGGGTGGAACTGCCATGAACTGAGATGGGGAAGGTGGAGGGGGAGCTGGTGGTGGGGAGGGGTGGAACTGCCATGAACTGAGATGGGGAAGGTGGAGGGGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12420:HG3_PB_pbsv_17611:HG2_PB_pbsv_17912:HG4_PB_pbsv_17823:HG2_10X_allpass_2733:HG2_PB_SVrefine2PBcRplusDovetail_5086:HG4_PB_SVrefine2Falcon1Dovetail_11123:HG4_Ill_SVrefine2DISCOVARDovetail_12423:HG3_PB_SVrefine2Falcon1Dovetail_11104:HG3_Ill_SVrefine2DISCOVARDovetail_12646:HG2_PB_SVrefine2Falcon2Bionano_8777;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12420:HG4_PB_SVrefine2Falcon1Dovetail_11123:HG4_Ill_SVrefine2DISCOVARDovetail_12423:HG3_PB_SVrefine2Falcon1Dovetail_11104:HG3_Ill_SVrefine2DISCOVARDovetail_12646:HG2_PB_SVrefine2Falcon2Bionano_8777;NumExactMatchSVs=6;ClusterMaxShiftDist=0.191523;ClusterMaxSizeDiff=0.191523;ClusterMaxEditDist=0.191523;PBcalls=7;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-290;DistBack=-175;DistForward=-276;DistMin=-276;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=184;REFWIDENED=19:8772904-8773377;PctSeqSimilarity=0.9667;PctSizeSimilarity=1;PctRecOverlap=0.866;SizeDiff=0;StartDistance=-39;EndDistance=-39;GTMatch=0;TruScore=94;MatchId=1715.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:19:1|0:2:14:13:2:0/0:6:0:8:0:./.:7:0:./.:.:.:.:.:.
chr19	9519643	HG3_Ill_svaba_22198	CAGAATTTGAACATGAACATGAACATGTTCCTTGAACATGTTCCTTGATCATGAACATG	C	20	PASS	ClusterIDs=HG3_PB_pbsv_17621:HG4_PB_assemblyticsfalcon_12094:HG3_PB_assemblyticsfalcon_12286:HG4_Ill_GATKHC_28134:HG4_Ill_GATKHCSBGrefine_12072:HG3_Ill_GATKHC_28052:HG3_Ill_GATKHCSBGrefine_11599:HG2_Ill_GATKHC_28142:HG2_Ill_GATKHCSBGrefine_11701:HG4_Ill_Cortex_1615:HG3_Ill_manta_3905:HG3_Ill_Cortex_1660:HG2_PB_PB10Xdip_16250:HG2_PB_PB10Xdip_16249:HG2_Ill_manta_4765:HG2_Ill_Cortex_3876:HG2_Ill_SpiralSDKrefine_7689:HG2_PB_HySA_32508:HG4_Ill_Spiral_1379:HG3_Ill_Spiral_18129:HG2_Ill_Spiral_1163:HG4_Ill_svaba_21932:HG4_Ill_250bpfermikitraw_23108:HG4_Ill_150bpfermikitraw_22209:HG4_10X_allpass_3214:HG3_Ill_svaba_22198:HG3_Ill_250bpfermikitraw_22802:HG3_Ill_150bpfermikitraw_22126:HG3_10X_allpass_3371:HG2_Ill_svaba_21970:HG2_Ill_250bpfermikitraw_23459:HG2_Ill_150bpfermikitraw_22087:HG2_PB_pbsv_17920:HG4_PB_pbsv_17833:HG4_Ill_Krunchall_24138:HG3_Ill_scalpel_16937:HG3_Ill_Krunchall_23377:HG2_Ill_scalpel_16580:HG2_Ill_Krunchall_23775:HG2_PB_assemblyticsPBcR_11851:HG3_PB_HySA_26935:HG4_Ill_Krunchall_24137:HG3_Ill_Krunchall_23376:HG2_PB_assemblyticsfalcon_12224;NumClusterSVs=44;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22087:HG2_Ill_250bpfermikitraw_23459:HG2_Ill_svaba_21970:HG3_10X_allpass_3371:HG3_Ill_150bpfermikitraw_22126:HG3_Ill_250bpfermikitraw_22802:HG3_Ill_svaba_22198:HG4_10X_allpass_3214:HG4_Ill_150bpfermikitraw_22209:HG4_Ill_250bpfermikitraw_23108:HG4_Ill_svaba_21932;NumExactMatchSVs=11;ClusterMaxShiftDist=0.205607;ClusterMaxSizeDiff=0.205607;ClusterMaxEditDist=0.205607;PBcalls=11;Illcalls=31;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=17;HG3count=15;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-58;DistBack=-81;DistForward=1277;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:9519642-9519703;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.9655;PctRecOverlap=0.9661;SizeDiff=2;StartDistance=-2;EndDistance=0;GTMatch=0;TruScore=97;MatchId=1716.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:51:./.:0:3:3:46:1/1:0:15:0:25:1/1:0:34:./.:.:.:.:.:.
chr19	10636680	HG2_Ill_svaba_21979	TATATACATATACATATACATATACATATACATATACACATATACATATAC	T	10	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22097:HG4_Ill_GATKHCSBGrefine_12077:HG2_Ill_GATKHC_28151:HG2_Ill_GATKHCSBGrefine_11707:HG2_Ill_SpiralSDKrefine_7698:HG4_Ill_svaba_21941:HG4_Ill_scalpel_16202:HG4_Ill_Krunchall_24150:HG4_Ill_250bpfermikitraw_23118:HG4_Ill_150bpfermikitraw_22219:HG2_Ill_svaba_21979:HG2_Ill_Krunchall_23786:HG2_Ill_250bpfermikitraw_23469;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22097:HG4_Ill_svaba_21941:HG4_Ill_scalpel_16202:HG4_Ill_Krunchall_24150:HG4_Ill_250bpfermikitraw_23118:HG4_Ill_150bpfermikitraw_22219:HG2_Ill_svaba_21979:HG2_Ill_Krunchall_23786:HG2_Ill_250bpfermikitraw_23469;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0816327;ClusterMaxSizeDiff=0.0816327;ClusterMaxEditDist=0.1;PBcalls=0;Illcalls=13;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=1;NumTechsExact=1;SVLEN=-50;DistBack=10739;DistForward=-35;DistMin=-35;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=DUP;BREAKSIMLENGTH=113;REFWIDENED=19:10636671-10636809;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1717.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:0|1:21:4:3:18:0|1:33:1:0:16:0/1:29:27:./.:.:.:.:.:.
chr19	12557696	HG4_Ill_manta_4054	TGCTTCAATGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTGTCGCCCAGGCTGGAGTGTAGTGGCGCAATCTCGGCTCACTGCAGGCTCCGCCCCCTGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCTCGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGG	T	20	PASS	ClusterIDs=HG2_10X_allpass_2736:HG2_PB_assemblyticsfalcon_12254:HG2_PB_assemblyticsPBcR_11884:HG2_PB_SVrefine2PB10Xhap12_13048:HG4_PB_assemblyticsfalcon_12116:HG3_PB_assemblyticsfalcon_12311:HG2_PB_PB10Xdip_14618:HG2_PB_SVrefine2PBcRplusDovetail_5103:HG2_PB_HySA_32539:HG4_PB_pbsv_17844:HG4_PB_HySA_25996:HG4_Ill_MetaSV_2327:HG2_Ill_tnscope_1895:HG4_PB_SVrefine2PBcRDovetail_8980:HG4_PB_SVrefine2Falcon1Dovetail_11133:HG4_Ill_manta_4054:HG4_Ill_GATKHCSBGrefine_12083:HG4_10X_allpass_3219:HG3_PB_SVrefine2Falcon1Dovetail_11116:HG2_PB_pbsv_17931:HG2_PB_SVrefine2PBcRplusDovetail_5102:HG2_PB_SVrefine2PB10Xhap12_13047:HG2_PB_SVrefine2Falcon1plusDovetail_5548:HG2_Ill_manta_4769:HG2_Ill_breakscan11_2570:HG2_Ill_MetaSV_2260:HG2_Ill_GATKHCSBGrefine_11710;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_2736:HG4_PB_SVrefine2PBcRDovetail_8980:HG4_PB_SVrefine2Falcon1Dovetail_11133:HG4_Ill_manta_4054:HG4_Ill_GATKHCSBGrefine_12083:HG4_10X_allpass_3219:HG3_PB_SVrefine2Falcon1Dovetail_11116:HG2_PB_pbsv_17931:HG2_PB_SVrefine2PBcRplusDovetail_5102:HG2_PB_SVrefine2PB10Xhap12_13047:HG2_PB_SVrefine2Falcon1plusDovetail_5548:HG2_Ill_manta_4769:HG2_Ill_breakscan11_2570:HG2_Ill_MetaSV_2260:HG2_Ill_GATKHCSBGrefine_11710;NumExactMatchSVs=15;ClusterMaxShiftDist=0.29771;ClusterMaxSizeDiff=0.29771;ClusterMaxEditDist=0.29771;PBcalls=17;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-289;DistBack=11320;DistForward=-104;DistMin=-104;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=350;REFWIDENED=19:12557697-12558335;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1718.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:23:0|1:34:0:3:21:0|1:55:0:0:32:0/1:8:10:./.:.:.:.:.:.
chr19	12694655	HG3_PB_SVrefine2Falcon1Dovetail_11117	TGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATGTCGGCTCACTGAAAGCTCCGCCTCCTGGGTTCACACCATTCTCCTGTCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGAGTTTCACCGTGTTAGCCAAGATGGTTTCCATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCTGCCATTATTTCTATATTTTAACTGTGATCACTTGAAGCCTTATTGTTCTTTTTCTTTTTATTTTTTTTGAGATGGAGTCTTGCTCTGTTGCTCAGGCTGGAGTGCAATGGTGCGATCTTGGCTCACTGCAACCTCCTCCTCCCAGGTTCCAGTGATTATCCTGCCCCAACCTCCCAAGTAGCTGGGACTACAGGCGCGTGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGAATCGCCCCCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCACCTTATTGCTCTTTAAATACAGACCCAAGACCATCTTGGATATATGAGAGAAATGCTGTACAAATGAAACAAATTGTAAGATCATCAATTCCTCGTGAGAAAAACTCTTTCATTTTCTACCTTATTACATACTGTACCACTCAGCATTTCATGAAACTTGGGGTCAAATCTGGATGAGATTTTAATAAATGAATACACCCTTTAGACTATAAGCTGCACATCTCCCATTGAGGATGAAAAACTGTGTATTTTTCTTTTTCATAAACAACATGAGAGATCAGGAAGTCTGTGAAAAGCCAGAAGTCACTGGCCATGTTGCCCTGAAGGATCTCGGGCCATTAGAACCATGCAAATCCAGGTGGCTGAATGAAAATATTCTTCTGCATTAGTATTAATTTCAACGTGTTTGTGTAATATTTATCATAGGTTCAGTTTTTCCTTTCTGTCTCATTTCATGGGTCTAGGAGGTTATTGGAAAGAAAGCACAGCAACTTGGACCTCTATAAACCCCTGTACTCATGAAGGTTTATTACTCGCATGCTTGAGCTCTCAGGCAAAGCTGTGTAACTCTCAAGCACTTGTGAAGTGGCTTCGGAGAGCAAGAAAAGGAGCCTGGCTGGGGATTTTTACTGACATTAGGGAGTGGGCTAGTGTGAGTTCAAGCATACAGGTGGAGGCTGATGCGAATTGGCTCTGTCGCCAGCACCAAATGAGGGTGACCCAGGCTTTCTTCCTACCACGTCCATATGTGGGGTACACAGTGGAAACTGAGGAATGAGGTTTTAAAGCTGTGAGCAGTCAAAAGCCAGGCGGGGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCAGAGGTGGGCAGATCATTTGAGGTCAGGAGTCCAAGCACTAAACCTCCAGCCCTTTTTCTCTCCCCCGACTTTGGGGGCTAGGGCTAGAGGAAGATCAAGACTGGGTGTCTTTCGGGACATCAATCCCCACCCTGAAGTTAGGTAGGCATTCTTTCCAGTAGTCATTTATTTACAACAAGAGAGGGTCCATTACCCTTATCACTCATGAAATTCCAAGAGATTTAGGAACTCTGTACTAGGAACCACACACAAAGACCAAACAAATGTCTTTCTTATCATAGCAAAGAACATCATGGCTCGGGGCACAGGCTCACCAGAAGACAGATGATTCATAGGATTATATCATGTTTCCACTCCAGCCACTGGTAACAGTGTGACATTAGAGTTTTGTTTTTATTTTGAGACCCAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTTGGCTCACTACAACCCCTGCCTCCAGCATTCAAGCAGTTCTCCTGCCTCAGCCAACAGAGTAGCTGGGATTACAGGCATACACAACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTGTTTCTTCATGTTGGCCAGGATGGTGTCGAACTCCTACCTCAAGTAATTTGCCTGCCTTGGCCTCCCAAAATGCTAGGATTACAGGAATGAGTCACCACTCCTGGCCTGGGTTTTTGTTTTAAAACAGTAGAACAGGCCAGGTGTGGTGGCTCACGACTGTAATCCCAGCACTTTGGGAGGCGGGGGGCGGGCAGATCACTTGACATCAGGAGTTTGAGACCAGCCTGGCCAACATAGCAAAACCCCATCTCTACTAAAAATACAAAAATTTGCCGGGTGTGGTGGGCACCTGTAATCCCGGCTACTTGGGAGGCTGAGGGAAGAGAATCGCTTAAACCTGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGTGCCCCTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCACCTCAAAAAATAAAATAAAATAAAATAAAATAAAACAGTAGAATACAATGAAACAATATTCTATTTCTTTCTGCATGTTTCACAATTGAAGAAATCTCTAGAGAACCCCAAAAATGACAGAACACAGAAAACCAGGGACACCAAAGGCAATTTTATCTGACACCTACAGTTACTGAAAATAGTAAACACAGCCTAAAATCAACAGGATAAACCTAAACCCTCACATTTAAAGCCTGTTTACCTCAGTTCCTTTTCAACACCATGCCCAGATCTCAACAAAAATTACAAGATATATTAAAAGACTTAGACGGTTTGAAGAGAGAGTGCAGGCATCAGAACCAGACTGAGATATAAAAGAGATGCTGGAATTATCAGACCAGAAATTTATTTCTTTTCTTTTTTTTTTGAGACAGAGTCTTACTCTGTTGCCTAGGCTGGATTGCAGTGACACAATCTCAGCTCACTGATACTGTCATAGTGGATAAAAAAGAACACCTGGCCAGGCGTGGCTCACGCCTGTAATCCCAGAACTTTGGGAGGCCGAGGCAGGAGGACCTCTTGAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCTGTCTCTACTAAAAATACAAAATTAGTCAGGTGCAGCGGCACATGCCTGTAATCCCAGCTACTCACGAGGCAGGAGAATCACTTGAACTTGGGAGGCAGAGGTTGCAGTGAGGCGAGATCGCGCCATGGCTCTCCAGCCTGGGCAACAGGAATAAAACTCCATCTCAAAAAAAAAAAAAGAAAAAGAAAAAAGAATACCTAATATATGTTGTCTGCAAGAAATTCGCTTTTTTTTTTTTTTTTACTTTGTTTTTTAGAGACAGGGCCATGCTCTGTCACCCAGGCTGGAGTGCAGTTGTGGGATGACAGATGACTATAACCTCAAACTCCTGGGCTCAAAGGACTCTCACCTCAGCCTCTGAGTAGCTGGAACTACAGGTGTGCACTACCATCCCTTGATAATTTTGTTTCTTTTTATAGAGATGGGGTCTCACTATGTTGCCCAGGCTTGTCTCAAACTCCTGGCCTCAAGCAATCATCCTGCCTCAGCCTCCCAAAATGCTGGGATTACAGGTGCGAGCCACCATACCTAGGCCAACAAATCCACTTTAAATATATCACAAAGATTGGGGGGAGGGGGGAGGGATAGCATTAGGAGATATACCTAATGTAAATGACCAGTTAATGGGTACAGCACACCAACATGGCACATGTACACATATGTAACAAACCTGCACGTTGTGCACATGTACCCTAGAACTTAAAGTATAATAATAAAAAGTAATAATAAATAAATATATCACAAAGATATATTAAAAATAAAGGAATAGAGAAAGATATACTATGCTAACACTAATTATTATTATTATTATTTTGAGACAAAGTCTCACTCTGCCACCCAGGCTGGAGTGCAGTGGCGCAATCTTGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGATTACAGGCGCACACTACCACACCCAGCTAATATTTTTTGTTTGTTTGTTTGTTTGAGTCGAAGTTTC	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_8981:HG2_10X_allpass_2737:HG4_Ill_Krunchall_24168:HG3_Ill_Krunchall_23402:HG2_Ill_Krunchall_23803:HG3_PB_assemblyticsfalcon_12312:HG4_PB_assemblyticsfalcon_12117:HG2_PB_assemblyticsfalcon_12256:HG2_PB_assemblyticsPBcR_11885:HG4_10X_allpass_3220:HG2_PB_pbsv_17932:HG3_10X_allpass_3374:HG4_PB_pbsv_17845:HG2_PB_HySA_32540:HG4_Ill_MetaSV_2328:HG4_Ill_GATKHCSBGrefine_12085:HG3_PB_HySA_26949:HG3_Ill_MetaSV_2403:HG3_Ill_GATKHCSBGrefine_11606:HG2_Ill_MetaSV_2261:HG2_Ill_GATKHCSBGrefine_11712:HG2_Ill_tnscope_1896:HG3_PB_pbsv_17630:HG2_10X_SVrefine210Xhap12_12451:HG4_PB_SVrefine2Falcon1Dovetail_11134:HG4_Ill_SVrefine2DISCOVARDovetail_12456:HG3_PB_SVrefine2PBcRDovetail_8740:HG3_PB_SVrefine2Falcon1Dovetail_11117:HG3_Ill_SVrefine2DISCOVARDovetail_12671:HG2_PB_SVrefine2PBcRplusDovetail_5104:HG2_PB_SVrefine2PB10Xhap12_13049:HG2_PB_SVrefine2Falcon2Bionano_8787:HG2_PB_SVrefine2Falcon1plusDovetail_5549:HG2_Ill_SVrefine2DISCOVARplusDovetail_5900;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5900:HG2_PB_SVrefine2Falcon1plusDovetail_5549:HG2_PB_SVrefine2Falcon2Bionano_8787:HG2_PB_SVrefine2PB10Xhap12_13049:HG2_PB_SVrefine2PBcRplusDovetail_5104:HG3_Ill_SVrefine2DISCOVARDovetail_12671:HG3_PB_SVrefine2Falcon1Dovetail_11117:HG3_PB_SVrefine2PBcRDovetail_8740:HG4_Ill_SVrefine2DISCOVARDovetail_12456:HG4_PB_SVrefine2Falcon1Dovetail_11134;NumExactMatchSVs=10;ClusterMaxShiftDist=0.131519;ClusterMaxSizeDiff=0.131519;ClusterMaxEditDist=0.131519;PBcalls=17;Illcalls=13;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-4058;DistBack=6333;DistForward=27002;DistMin=6333;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=254;REFWIDENED=19:12694656-12698967;PctSeqSimilarity=0.8977;PctSizeSimilarity=0.999;PctRecOverlap=0.9456;SizeDiff=4;StartDistance=-221;EndDistance=-217;GTMatch=0;TruScore=94;MatchId=1719.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:2:105:1/1:0:15:1:11:./.:29:0:12:2:0/0:30:0:./.:17:309:3974:.:.
chr19	13739080	HG3_10X_allpass_3375	TTTGAGACCAGCCTGGGCAACATAGTGAGACCCCTGTCTCTATTTTTAAAAGGAGAGGAGAGGGGAGGGGAGAAGAGGGGAGGGGAGAGGAGGAGAGGGAAGGGGAAAAGGAAGAGAGACCTGAAGC	T	20	PASS	ClusterIDs=HG2_PB_HySA_32554:HG3_PB_SVrefine2Falcon1Dovetail_11124:HG4_Ill_Krunchall_24177:HG3_Ill_Krunchall_23409:HG3_PB_HySA_26966:HG4_PB_pbsv_17853:HG4_Ill_GATKHC_28185:HG4_Ill_GATKHCSBGrefine_12090:HG3_Ill_GATKHC_28090:HG3_Ill_GATKHCSBGrefine_11608:HG2_Ill_GATKHC_28183:HG2_Ill_GATKHCSBGrefine_11714:HG4_PB_SVrefine2PBcRDovetail_8987:HG4_Ill_manta_4056:HG3_PB_SVrefine2PBcRDovetail_8747:HG3_PB_SVrefine2Falcon1Dovetail_11123:HG2_PB_SVrefine2Falcon1plusDovetail_5554:HG2_Ill_manta_4770:HG2_Ill_SVrefine2DISCOVARplusDovetail_5908:HG2_Ill_SpiralSDKrefine_7720:HG3_PB_assemblyticsfalcon_12320:HG2_PB_assemblyticsfalcon_12265:HG2_PB_pbsv_17939:HG3_PB_pbsv_17637:HG4_PB_HySA_26011:HG4_Ill_svaba_21969:HG4_Ill_MetaSV_2329:HG4_10X_allpass_3221:HG3_Ill_svaba_22224:HG3_Ill_scalpel_16958:HG3_Ill_MetaSV_2404:HG3_10X_allpass_3375:HG2_Ill_svaba_21998:HG2_Ill_MetaSV_2262;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_MetaSV_2262:HG2_Ill_svaba_21998:HG3_10X_allpass_3375:HG3_Ill_MetaSV_2404:HG3_Ill_scalpel_16958:HG3_Ill_svaba_22224:HG4_10X_allpass_3221:HG4_Ill_MetaSV_2329:HG4_Ill_svaba_21969:HG4_PB_HySA_26011;NumExactMatchSVs=10;ClusterMaxShiftDist=0.125;ClusterMaxSizeDiff=0.125;ClusterMaxEditDist=0.19403;PBcalls=13;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=13;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-126;DistBack=274;DistForward=-120;DistMin=-120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=99;REFWIDENED=19:13739076-13739300;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1720.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:0|1:25:0:2:21:1|0:0:5:22:1:0/1:25:20:./.:.:.:.:.:.
chr19	13775579	HG2_Ill_SVrefine2DISCOVARplusDovetail_5909	TGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATTACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTACTAAAAATTAAAAAAAAAAGAAAATTAGCTGGGCGTGGTGGCGGGTGCATGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAACAATTGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCTGAGATTGCGCCACTGCACTCCAGCCTGGCAACAGAGCAAGACTCTGTCTCAAAAAAATAAATAAAATAAAATAAACTCTGCTCCCTCACTGCACTCCAGCCTGGGTAACAGAGGGAGACTCCATCTCTGAAAAAAGAGAAAAAAACAAAAAACTCTGCTTTTTGAATATTTGGGGAGACTGATTTTAGTCATAATAAAACTCTGGTCTCCCGCACGGCCAGCTCTGTGTGAATTACTCTTTCTCTATTGCAATTCCCCTGTCTTGATAAATCAGACAGCAGGGAACTGAAACCCTCTGCTCAGAGATAAACAGGAACTGTACCTGGTCCATTTAATAAAGAGAGCTGCTTGGCTTTGGGGTAGGGGTGGTAACTTCTCCATCAGGGCAGAGTAGGGAGGGGACTTTGGGATCAGTCATTTGAAGCCCTCCTGGTTTCACCAGCTGTCAAGGCAGCACATAACATTGAGCCTTAATTTTAGGCTTTGCACCACGTCGCTTCTGGGCATTATTTTTTAGCAAGTGTTATGGGGTGACAGAAAGGAAAGATAAAATATTCTCCCAGAGGGACGTTATTCATAATCGCTGTGAGTTGTACAGAAATCAGTATACGGTGTCTTTTTTTTTTTTTTTTTCTTGTCCAAGGAAACTAAACTCCAAACGAAGTGAAATAAAGTTGGAGAGAACTTTAACCTCGCTGCCATGGAAACCACATTTCTCACTCATGGGGCAAAGAGGGTTTATGTGAGGATCTCCTGAGTCGATAAGGTATCTGGACATTGGCAATTCCAGATATTTGATTAACAAGCAGGAAATCGTAAGGATTTCCTAAGATTGACTAGCCGAGGAAGGGAAGCTTGGGATAAAAGAAGTGCTTCTTTCAGGAGAGGCATTTCCTACCCCTTCATTCTAAACCAGGGCTCCTGGCC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5909:HG2_PB_assemblyticsfalcon_12267:HG4_Ill_Krunchall_24178:HG4_10X_allpass_3222:HG2_10X_allpass_2738:HG4_PB_HySA_26013:HG2_PB_pbsv_17940:HG4_PB_pbsv_17854:HG2_Ill_MetaSV_2263:HG4_Ill_GATKHCSBGrefine_12091:HG2_PB_SVrefine2Falcon1plusDovetail_5555:HG2_Ill_GATKHCSBGrefine_11715:HG2_PB_HySA_32556:HG4_PB_SVrefine2PBcRDovetail_8988:HG4_PB_SVrefine2Falcon1Dovetail_11140:HG4_Ill_SVrefine2DISCOVARDovetail_12460:HG3_PB_SVrefine2Falcon1Dovetail_11125:HG2_PB_SVrefine2PBcRplusDovetail_5111:HG2_PB_SVrefine2PB10Xhap12_13055:HG2_PB_SVrefine2Falcon2Bionano_8791;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5909:HG4_PB_SVrefine2PBcRDovetail_8988:HG4_PB_SVrefine2Falcon1Dovetail_11140:HG4_Ill_SVrefine2DISCOVARDovetail_12460:HG3_PB_SVrefine2Falcon1Dovetail_11125:HG2_PB_SVrefine2PBcRplusDovetail_5111:HG2_PB_SVrefine2PB10Xhap12_13055:HG2_PB_SVrefine2Falcon2Bionano_8791;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0700389;ClusterMaxSizeDiff=0.0700389;ClusterMaxEditDist=0.0700389;PBcalls=12;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-1163;DistBack=30753;DistForward=-1054;DistMin=-1054;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=285;REFWIDENED=19:13775580-13777027;PctSeqSimilarity=0.9495;PctSizeSimilarity=1;PctRecOverlap=0.9072;SizeDiff=0;StartDistance=-108;EndDistance=-108;GTMatch=0;TruScore=95;MatchId=1721.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:27:0|1:33:1:0:23:./.:42:0:8:7:0/1:62:14:0/1:78:38:1012:.:.
chr19	14732331	HG4_Ill_SVrefine2DISCOVARDovetail_12464	AAAACTCCTGGACTTGAGTAAAACCATGGCAATATTGCCCTAAAGCTACCTAACTGTGACTATGGAAATTGCTACTTTGCATTCAGTGTTGTGGGATTTGCACGGGCAGTACTCATTTTCCCTCATACTTCGGATTGACCACAGTTGTTACGGCACTCTTATAAATAGGATTTTCACCCGTGTCCCATTTGGCATTCATTTTCTCCTTTTCAAATTTAGCAAACTCCCTTCTGTCATGAATTATCATTAAAAGCTTCCATATCAGCAGTAATGCAAGGCCAATAAGAACAATTCCAGCAACCACACCAGCTACAATTGGAATGATGTCTGGACCAGTGGGACACTCTGGATTCTCCACAACATGAACCATGACCTCGTTGTTCCCATTCACTGAATACGTAAAATAGAACCAACAGTCGTCAACATCCTTCTCCTTACAATGGGACACAGGATCAGGTTGGACCGGCTGGGGTAATTTGTCCCGACTTTCTACCTTGGTAATGTTAAAATAGGAACATTCCTGTGTGCATGTGTCTTTCTTTTCTCCTTTATTGAAGGCTCTGCACTGAACACATTCTTTATGCTCAGCACAGACACCAAGGCAGGTCTGACACATCTCACACGTTTGCCCTTGAAACTTCGGATCTGTACACTTACAGACACCACACTCGCAGATGCCCCGGCCATTGCAGATCTGTCCGTTGCTGGCTTCACAAGTACTAGTATAATTTTTAAAATGTTTTATTATTTTGAAAATAATGTTGTAATTCATGCCAGGGACTGACAAAAGACTTGAGACAGGATGGTTATTCTTGTCAGCTAAGGTCACATTGTGCCTTTTTGACCTTTTCTTCCTGGACTATTGAAATCAAGCTTATTGGATTAAGTGATATTTCTATAGCGATTGAAAGGGCAATAGTTAAAGTAATGAGCATGATGAGAGTTTCTGTTAATCATGTATTAAAACTGATTTTTAGCTTTACAAATATGTCAGTTTGCAGTTATGCAGAATCCAAAGTAAATGTCCTGCTAGCTAGTTAAGGATTGTTTTAAATCTGTTATTTTGCTATTTGCCTGTTAGACATGACTGATGACATATCTGAAAGACAAGTATGTTGAGAGTTGCTGGTGTAAAATACGTTTGAAATAGTTGATCTACAAAGGCCATGGGAAAAATTCAGAGAGTTAGGAAGGAAAAACCAATAGCTTTAAAACCTGTGTGCCATTTTAAGAGTTACTTAATGTTTGGTAACTTTTATGCCTTCACTTTACAAATTCAAGCCTTAGATAAAAGAACCGAGCAATTTTTTGCTAAAAAGTCCTTGATTTAGCACTATTTACATACAGGCCATACTTTACAAAGTATTTGCTGAATGGGGACCTTTTGAGTTGAATTTATTTTATTATTTTTATTTTGTTTAATGTCTGGTGCTTTCTGTCACCTCTTCTAATCTTTTAATGTATTTGTTTGCAATTTTGGGGTAAGACTTTTTTTATGAGTACTTTTTCTTTGAAGTTTTAGCGGTCAATTTGCCTTTTTAATGAACATGTGAAGTTATACTGTGGCTATGCAACAGCTCTCACCTACGCGAGTCTTACTTTGAGTTAGTGCCATAACAGACCACTGTATGTTTACTTCTCACCATTTGAGTTGCCCATCTTGTTTCACACTAGTCACATTCTTGTTTTAAGTGCCTTTAGTTTTAACAGTTCACTTTTTACAGTGCTATTTACTGAAGTTATTTATTAAATATGCCTAAAATACTTAAAAAAAAAAAAATAAAAAAAAAAAAAAATA	C	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2266:HG3_PB_assemblyticsfalcon_12334:HG2_Ill_SVrefine2DISCOVARplusDovetail_5918:HG2_PB_assemblyticsPBcR_11911:HG2_10X_allpass_2739:HG3_PB_HySA_26981:HG4_PB_assemblyticsfalcon_12138:HG2_PB_assemblyticsfalcon_12280:HG4_PB_HySA_26032:HG4_Ill_GATKHCSBGrefine_12099:HG2_Ill_GATKHCSBGrefine_11720:HG3_PB_SVrefine2Falcon1Dovetail_11131:HG4_PB_SVrefine2PBcRDovetail_8990:HG4_Ill_SVrefine2DISCOVARDovetail_12464:HG3_Ill_SVrefine2DISCOVARDovetail_12678:HG2_PB_SVrefine2PBcRplusDovetail_5116:HG2_PB_SVrefine2PB10Xhap12_13062:HG2_PB_SVrefine2Falcon2Bionano_8796:HG2_PB_SVrefine2Falcon1plusDovetail_5562:HG2_PB_PB10Xdip_14643:HG2_Ill_SVrefine2DISCOVARplusDovetail_5917:HG2_10X_SVrefine210Xhap12_12461:HG4_PB_SVrefine2Falcon1Dovetail_11146:HG2_PB_HySA_32576:HG2_Ill_tnscope_1897:HG4_Ill_MetaSV_2332:HG3_Ill_MetaSV_2406:HG4_PB_pbsv_17863:HG4_10X_allpass_3223:HG3_PB_pbsv_17644:HG3_PB_SVrefine2PBcRDovetail_8750:HG3_Ill_GATKHCSBGrefine_11616:HG3_10X_allpass_3376:HG2_PB_pbsv_17950;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12461:HG2_Ill_SVrefine2DISCOVARplusDovetail_5917:HG2_PB_PB10Xdip_14643:HG2_PB_SVrefine2Falcon1plusDovetail_5562:HG2_PB_SVrefine2Falcon2Bionano_8796:HG2_PB_SVrefine2PB10Xhap12_13062:HG2_PB_SVrefine2PBcRplusDovetail_5116:HG3_Ill_SVrefine2DISCOVARDovetail_12678:HG4_Ill_SVrefine2DISCOVARDovetail_12464:HG4_PB_SVrefine2PBcRDovetail_8990;NumExactMatchSVs=10;ClusterMaxShiftDist=0.101867;ClusterMaxSizeDiff=0.101867;ClusterMaxEditDist=0.101867;PBcalls=19;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1797;DistBack=951;DistForward=-3;DistMin=-3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=19:14732332-14734146;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=0.9989;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1723.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:56:1/1:1:13:1:19:1/1:0:12:0:15:1/1:0:22:1/1:4:100:1871:.:.
chr19	15046391	HG2_PB_SVrefine2PBcRplusDovetail_5119	ATGCTCAGTTAAAATAAGTTTTCAGGCTGGGTGTGGTGGCTCACGCCTGTAATACCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACAAGGTCAGCAGTTCAAGACCAGCCTGACCAACATAGTGAAACCCCATCCCTACTAAAAATACAAAAATTAGCTGGGCGTGTTGGCGTGCACCTGTAATCTCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCATGCCACTGCACTCCAGCCTGGGAGAAGAGCAAGGCTCTGTCTCAAAAAGAGAAAAAAAGAAAAAAAAAAGAATAAGTTTTCAGCTACCAATCCATCATCCACAGCCAATCCATCATCCACAGCCAATCCATCATCCACAGCCAATCCATCATCCGAAAACAAAGTTATGTTGCCTTTTTAATATAGGTCTCATTTCTTTTTCTCCTTGTATTGCATTGGTTGAAACTTCCAGGGCACTGACAAATAATTACTAATAATAAACATACTTTTCCTTTTTAATTCTTAAAGGAGAATTCTCCTGTTGTTCCTGCCACACAGCCTCACCAGGGCATTTTTGGAAGTAAGTTCTGTTTATTTAATTCCTTCCTTAGTTATTGATCTGTTTTCCTCCATCCCGAATCAACTTTGGGCACTTATGTTTTTCCAGAAATAAATTCATTTCTTGGGGATTTTCACATTTTTAACATGGCGTTATAAATGACATTATCTTGCAAAGTTGAGTGTTTCCTTATCTCTGTGTTCATTTTTTTCTCATTCTTGGTTTTAGGCCTTTCTGCTCTTTCTCCCTCTTTGTATCCCTTTTGTTACACTTCTAATTTTTTCTATTCGTTTGTGGTTGCCAAAGAATTCGCTCTGGAATTTATTTTTCAGTTCCAGAATATTTCTTCTTTTTAGTTCATTAATTCTGCTTTGATCTTTATTAGCTACTCCTTTCTGTTTTAACAGAATGTTAAATATTTTGTGATAATTTTTAACAAAATCAAATTTTACAATATTGATTTTATAACACTTGTATTGACAATATCTTCAAATTTTTAAGTTTTTATTTCTTGAGGATAGGCTACACATGTATTCATTTGCAATTTTCAAACAATATGCTAAAAAAGGAATCTAAAAATCAAAATTAATGTTAACACTCAAAGATGATCCCTCTTCATACTTTGGGGTATGTTGTTATGGATCTTTTTTTTCTTTTGGTGCCAATATGTGTATAGTTTAAGAGATCCATAGGCTGAGTTCATTTCTCTAGCTCAGAAAAGGAGACCAAATGTCTTTTCATAGCAGTATCTGAAATGTTTTCTTTCCACATGATGGAATTTTTTTTTCCCCCTAGATGGAGTCTCACTCTGTCGCCAGACTAGATTGGAGTACAGTGGCGCGATCTCGGCTCACTGCAACCTCCGCCTCCTGTGTTCAAGCCATTCTCTCTCAGCCTTCCGAGTAGCTGGGAGTAGCTGGGATTACAGGCACGTGCAACCATGCCCAGCTAATTTTTGTATTTTCAGTAGAGACGGAGTTTCACCATATTGGCCAGGATGGTCTCGATCTCTTGACGTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCCCCCAACCGAAATTTTGCATTCTTACTCTTCTTTCATACAGACATTTTAATTCCCTCAGTGAAAGGGGTATGTTATTGTTAATTTTACTTTTTTAGATTAACAGTAAAAATAAAACATTTTCTCAAACATTTATTATCCTTTTACAGTTCATTTTATGAACCTTTAATATTCTATTTATTTTCCCCATCAGTGCATTAATATTTCAATGATTTATAATTGTCTTTATAAAGATATTAACTTTTGTCAGTTACATAAATTTTTTTTTTGCATTCTAACTTTCTGCAAGGCACATTTTCTCATTCAGAATTTTTCAATTTATGGTTCTAGTTGCTGATCTCTTTTTCTATCAAAGGTGAATTATTCAGAAAGAATTTGTACTTTCAAAGATTATATCTATCCATGTATAAATTTATATAATCTATATGTTTATCTATGTTTTCTTCAGATAGCTTATGTAGTCTCTTGTCTGTTTGAAATGTATTTGGGACTACAGAGATGGGATTTGACATTATTTTTTCTAAATAATTAATCATTAAACACTTATTTATACCTTTAAAAAACACTATTTAAAATAACTAAAGGAGGCCAGGGAAGATGGCTCACACCTGTAATCCCAGCACTTTGGGAGCCTGAGGTGGGTGGATCACCTGAGATCAGGAGTTCAAGACCAGCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCAGGAATGGTGGCACATGCCTATAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATGGTGCCATTGCACTTCAGCCTAGGCAACAAGAGTGAAACTTCATCTTAAAAAAAAAAAAAAAAAAAAACCACAAAACAAACAAACAAAAAACTAAAGGATTATAATTGGATTGCTTGTAACACAAAGGATAAATGTTTGAGAGGATGGATGCCCCATTCTCCATGATGTGATTCTTATGCATTGCATGCCTGTATCAAAACATCTCATGTACCCCATAAATACATACACCTATTACGTACCCACAAAAATTAATAATAAGTTTTAAAAAGAGAAATAATAAATAAGACCTAGTATTTGCTAGCACAACAGGGTGAGTACAGTCAAAATCAATTTAATTGCACATTTTAAAATAACAAAAAGAATATAATTTGATTGTTTGCAACACAGAGGATAAATGCTTGAGGGAATGGATGCTGCATTTTCCATGATGTGATTACTATACGCATTGCATGCCTGAATCAAAATATGTCATGTAACTCATAGAGATATACACTTACCCACACAACTTAAAAAAATAAAAAAAAAATTTTAAACACACTCAAGTATCCAGAAATAAAAAATGCAAGTTAACGTGATAAAAATTACACATTCTAAATCACAGTGAACATCATAT	A	20	PASS	ClusterIDs=HG2_10X_allpass_2740:HG4_PB_pbsv_17870:HG3_10X_allpass_3377:HG3_PB_HySA_26986:HG2_Ill_tnscope_1898:HG4_PB_SVrefine2PBcRDovetail_8992:HG4_PB_SVrefine2Falcon1Dovetail_11151:HG4_Ill_SVrefine2DISCOVARDovetail_12466:HG4_Ill_MetaSV_2333:HG4_Ill_GATKHCSBGrefine_12101:HG3_PB_pbsv_17648:HG3_PB_assemblyticsfalcon_12341:HG3_PB_SVrefine2PBcRDovetail_8753:HG3_PB_SVrefine2Falcon1Dovetail_11136:HG3_Ill_MetaSV_2407:HG3_Ill_GATKHCSBGrefine_11617:HG2_PB_pbsv_17954:HG2_PB_assemblyticsPBcR_11915:HG2_PB_SVrefine2PBcRplusDovetail_5119:HG2_PB_SVrefine2PB10Xhap12_13066:HG2_Ill_breakscan11_2572:HG2_Ill_SpiralSDKrefine_7730:HG2_10X_SVrefine210Xhap12_12462:HG2_Ill_MetaSV_2267:HG4_PB_assemblyticsfalcon_12143:HG4_Ill_Krunchall_24194:HG3_Ill_Krunchall_23431:HG2_Ill_Krunchall_23825:HG4_10X_allpass_3224;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12462:HG2_Ill_SpiralSDKrefine_7730:HG2_Ill_breakscan11_2572:HG2_PB_SVrefine2PB10Xhap12_13066:HG2_PB_SVrefine2PBcRplusDovetail_5119:HG2_PB_assemblyticsPBcR_11915:HG2_PB_pbsv_17954:HG3_Ill_GATKHCSBGrefine_11617:HG3_Ill_MetaSV_2407:HG3_PB_SVrefine2Falcon1Dovetail_11136:HG3_PB_SVrefine2PBcRDovetail_8753:HG3_PB_assemblyticsfalcon_12341:HG3_PB_pbsv_17648:HG4_Ill_GATKHCSBGrefine_12101:HG4_Ill_MetaSV_2333:HG4_Ill_SVrefine2DISCOVARDovetail_12466:HG4_PB_SVrefine2Falcon1Dovetail_11151:HG4_PB_SVrefine2PBcRDovetail_8992;NumExactMatchSVs=18;ClusterMaxShiftDist=0.00779981;ClusterMaxSizeDiff=0.00779981;ClusterMaxEditDist=0.00779981;PBcalls=13;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3086;DistBack=1216;DistForward=-3085;DistMin=-3085;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:15046392-15049478;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1724.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:22:0|1:27:1:3:12:0|1:51:0:0:32:0/1:65:24:0/1:200:119:2867:.:.
chr19	15323007	HG2_PB_SVrefine2Falcon2Bionano_8800	GGCCGGGCGAGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCAGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGTGGAGGTTGCAGTGACCCAAGATCGCACCACTGCACTCCAGCCTGGTGACAGAGTGAGACCCTGTCCCCCGAAAAAAAAGCCACTTAGCCACTTCAGGGGCCTCAAACCACTCTGTTCAGTATAATTTTGCAGGCGGGGGTGGTCTATGGTTCCACAGAAGGGTCTAGGGATTGAGGGGCAAAGTTAGGGCCCTCAAGGAAAGGCCAGCTCCTCCCTTGGCCCATCTGAGAAGGGGCTTTCTTTCTTTTTTTTCTTTATTTTATTTATTTATTTATTTATTTTGAGACAGAATGTCATTCTGTCACCCAGGCTAGGCTGCAGTGGCTCGATCTCGGCTCACTGAAACCTCCGCCTCCGGTGTTCAAGCGATTGAGAAAGGGCTTTCTGCTGGAATGGATGCTGTAGGAGGTGCTGAGCTCCTCATCACTAGGAGCAACCAAGGACCCTGGACACACATTTCACTAGGCAGGAAGTTCAGAGTCTGTGACTGCTGATACAGCACACCCTGATCTGTGGGAGAGGGGGAAGTAACGGTGAAAACCCAGGCAGAGGACTTCACGGGGGAATACAGACTAAAAGAAGAAAGACCCGGCCAGGAGCGGTGGCTCATGCCTGTAATCCCAGCACTTGGGGAGGCTGAGACGTGCGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGTCAGGCTTGGTGGCAGACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAGGCAGGAGAATCATCCCTGCAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCTATCTCAAGAAAAAAAGAAAAAGACCCC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12463:HG3_10X_allpass_3378:HG3_Ill_GATKHCSBGrefine_11619:HG2_Ill_GATKHCSBGrefine_11723:HG3_PB_HySA_26989:HG2_PB_HySA_32590:HG3_PB_pbsv_17649:HG3_Ill_MetaSV_2408:HG2_10X_allpass_2741:HG3_PB_SVrefine2PBcRDovetail_8754:HG2_PB_pbsv_17955:HG2_PB_SVrefine2PBcRplusDovetail_5120:HG2_PB_SVrefine2PB10Xhap12_13067:HG2_PB_SVrefine2Falcon2Bionano_8800:HG2_PB_SVrefine2Falcon1plusDovetail_5566;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12463:HG3_PB_SVrefine2PBcRDovetail_8754:HG2_PB_pbsv_17955:HG2_PB_SVrefine2PBcRplusDovetail_5120:HG2_PB_SVrefine2PB10Xhap12_13067:HG2_PB_SVrefine2Falcon2Bionano_8800:HG2_PB_SVrefine2Falcon1plusDovetail_5566;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0917516;ClusterMaxSizeDiff=0.0917091;ClusterMaxEditDist=0.0936052;PBcalls=9;Illcalls=3;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-1127;DistBack=7500;DistForward=-1021;DistMin=-1021;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=274;REFWIDENED=19:15323008-15324408;PctSeqSimilarity=0.9511;PctSizeSimilarity=1;PctRecOverlap=0.9193;SizeDiff=0;StartDistance=-91;EndDistance=-91;GTMatch=0;TruScore=95;MatchId=1725.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:19:27:0|1:17:1:1:15:./.:14:6:33:0:0/1:51:8:0/1:108:29:1271:.:.
chr19	15691826	HG2_PB_SVrefine2Falcon2Bionano_8801	CCTTCCCTCCATCTTTCTTTCTTTCCTTCCTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTCCCTCCCTCCTTCTCTCTTT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8801:HG4_PB_pbsv_17872:HG2_PB_pbsv_17956:HG4_PB_SVrefine2PBcRDovetail_8993:HG4_Ill_SVrefine2DISCOVARDovetail_12468;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8801:HG4_PB_SVrefine2PBcRDovetail_8993:HG4_Ill_SVrefine2DISCOVARDovetail_12468;NumExactMatchSVs=3;ClusterMaxShiftDist=0.075;ClusterMaxSizeDiff=0.075;ClusterMaxEditDist=0.0875;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-82;DistBack=1530;DistForward=-70;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=19:15691825-15691918;PctSeqSimilarity=0.8689;PctSizeSimilarity=0.9756;PctRecOverlap=0.2651;SizeDiff=2;StartDistance=-61;EndDistance=-59;GTMatch=0;TruScore=70;MatchId=1726.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:25:0|1:24:6:0:18:0/0:27:1:31:1:./.:30:2:./.:.:.:.:.:.
chr19	15750574	HG4_Ill_Krunchall_24205	GTGGCACACAGTAGGCACTCTATGAGGAATATCAGGAACTGAGTATACAGGGTTAATGTAGAGCACC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12467:HG3_PB_pbsv_17652:HG2_PB_pbsv_17958:HG2_PB_HySA_32595:HG4_PB_HySA_26048:HG4_Ill_svaba_21996:HG4_Ill_manta_4061:HG4_Ill_Krunchall_24205:HG4_Ill_GATKHC_28217:HG4_Ill_GATKHCSBGrefine_12103:HG4_Ill_Cortex_1626:HG4_Ill_250bpfermikitraw_23170:HG4_Ill_150bpfermikitraw_22279:HG4_10X_allpass_3226:HG3_Ill_svaba_22254:HG3_Ill_Krunchall_23441:HG3_Ill_GATKHC_28126:HG3_Ill_GATKHCSBGrefine_11620:HG3_Ill_Cortex_1668:HG3_Ill_250bpfermikitraw_22859:HG3_Ill_150bpfermikitraw_22181:HG3_10X_allpass_3379:HG2_Ill_svaba_22025:HG2_Ill_scalpel_16618:HG2_Ill_manta_4774:HG2_Ill_SpiralSDKrefine_7735:HG2_Ill_Krunchall_23834:HG2_Ill_GATKHC_28216:HG2_Ill_GATKHCSBGrefine_11724:HG2_Ill_Cortex_3892:HG2_Ill_250bpfermikitraw_23517:HG2_Ill_150bpfermikitraw_22143:HG2_10X_allpass_2742:HG4_PB_pbsv_17874:HG2_Ill_breakscan11_2573:HG4_Ill_Spiral_1382:HG4_PB_SVrefine2Falcon1Dovetail_11153:HG3_PB_SVrefine2Falcon1Dovetail_11138:HG3_Ill_SVrefine2DISCOVARDovetail_12681:HG2_PB_SVrefine2PBcRplusDovetail_5121:HG2_PB_SVrefine2PB10Xhap12_13069:HG2_PB_SVrefine2Falcon2Bionano_8803:HG2_PB_SVrefine2Falcon1plusDovetail_5567:HG2_Ill_SVrefine2DISCOVARplusDovetail_5924;NumClusterSVs=44;ExactMatchIDs=HG2_10X_allpass_2742:HG2_Ill_150bpfermikitraw_22143:HG2_Ill_250bpfermikitraw_23517:HG2_Ill_Cortex_3892:HG2_Ill_GATKHCSBGrefine_11724:HG2_Ill_GATKHC_28216:HG2_Ill_Krunchall_23834:HG2_Ill_SpiralSDKrefine_7735:HG2_Ill_manta_4774:HG2_Ill_scalpel_16618:HG2_Ill_svaba_22025:HG3_10X_allpass_3379:HG3_Ill_150bpfermikitraw_22181:HG3_Ill_250bpfermikitraw_22859:HG3_Ill_Cortex_1668:HG3_Ill_GATKHCSBGrefine_11620:HG3_Ill_GATKHC_28126:HG3_Ill_Krunchall_23441:HG3_Ill_svaba_22254:HG4_10X_allpass_3226:HG4_Ill_150bpfermikitraw_22279:HG4_Ill_250bpfermikitraw_23170:HG4_Ill_Cortex_1626:HG4_Ill_GATKHCSBGrefine_12103:HG4_Ill_GATKHC_28217:HG4_Ill_Krunchall_24205:HG4_Ill_manta_4061:HG4_Ill_svaba_21996;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0451128;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.0606061;PBcalls=11;Illcalls=29;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=25;TenXexactcalls=3;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-66;DistBack=6945;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=29;REFWIDENED=19:15750563-15750657;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1727.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:54:1/1:3:17:1:4:1/1:0:7:0:16:1/1:0:45:./.:.:.:.:.:.
chr19	15993273	HG2_PB_SVrefine2PB10Xhap12_13078	AATGTTCTCAACATAAAAATGATAAATATATGAAGTGATGGATTTGTTCATTACCTTGATTTAATAATTTCAGGTTGTATACATACATCATAACATCACATTGTACCTCTAATATATAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12470:HG3_PB_HySA_27015:HG2_PB_pbsv_17969:HG4_PB_pbsv_17883:HG3_PB_pbsv_17661:HG4_PB_HySA_26076:HG4_PB_SVrefine2PBcRDovetail_8998:HG4_PB_SVrefine2Falcon1Dovetail_11159:HG4_PB_HySA_26075:HG4_Ill_svaba_22004:HG4_Ill_SVrefine2DISCOVARDovetail_12476:HG4_Ill_150bpfermikitraw_22290:HG3_PB_SVrefine2PBcRDovetail_8757:HG3_PB_SVrefine2Falcon1Dovetail_11145:HG3_Ill_svaba_22258:HG3_Ill_SVrefine2DISCOVARDovetail_12684:HG3_Ill_250bpfermikitraw_22866:HG3_Ill_150bpfermikitraw_22188:HG2_PB_assemblyticsfalcon_12304:HG2_PB_SVrefine2PBcRplusDovetail_5128:HG2_PB_SVrefine2PB10Xhap12_13078:HG2_PB_SVrefine2Falcon2Bionano_8810:HG2_PB_SVrefine2Falcon1plusDovetail_5574:HG2_Ill_svaba_22031:HG2_Ill_SpiralSDKrefine_7738:HG2_Ill_SVrefine2DISCOVARplusDovetail_5930;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12470:HG4_PB_SVrefine2PBcRDovetail_8998:HG4_PB_SVrefine2Falcon1Dovetail_11159:HG4_PB_HySA_26075:HG4_Ill_svaba_22004:HG4_Ill_SVrefine2DISCOVARDovetail_12476:HG4_Ill_150bpfermikitraw_22290:HG3_PB_SVrefine2PBcRDovetail_8757:HG3_PB_SVrefine2Falcon1Dovetail_11145:HG3_Ill_svaba_22258:HG3_Ill_SVrefine2DISCOVARDovetail_12684:HG3_Ill_250bpfermikitraw_22866:HG3_Ill_150bpfermikitraw_22188:HG2_PB_assemblyticsfalcon_12304:HG2_PB_SVrefine2PBcRplusDovetail_5128:HG2_PB_SVrefine2PB10Xhap12_13078:HG2_PB_SVrefine2Falcon2Bionano_8810:HG2_PB_SVrefine2Falcon1plusDovetail_5574:HG2_Ill_svaba_22031:HG2_Ill_SpiralSDKrefine_7738:HG2_Ill_SVrefine2DISCOVARplusDovetail_5930;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.0255319;PBcalls=15;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-118;DistBack=877;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=119;REFWIDENED=19:15993274-15993510;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1728.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:45:1/1:0:25:3:20:./.:0:6:0:3:1/1:0:35:./.:.:.:.:.:.
chr19	16061401	HG4_Ill_manta_4063	ATATACATATATATGTATACATATATATATACATACATATGTATACATATATACATATATATATATACATACATATGTATACATATATACATATATATG	A	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11161:HG4_PB_pbsv_17885:HG4_Ill_svaba_22008:HG4_Ill_scalpel_16255:HG4_Ill_manta_4063:HG4_Ill_SVrefine2DISCOVARDovetail_12477:HG4_Ill_Krunchall_24215:HG4_Ill_GATKHC_28235:HG4_Ill_GATKHCSBGrefine_12108:HG4_Ill_250bpfermikitraw_23180:HG2_PB_SVrefine2PB10Xhap12_13081:HG2_Ill_svaba_22035:HG2_Ill_scalpel_16624:HG2_Ill_manta_4776:HG2_Ill_SpiralSDKrefine_7740:HG2_Ill_SVrefine2DISCOVARplusDovetail_5931:HG2_Ill_Krunchall_23842:HG2_Ill_GATKHC_28227:HG2_Ill_GATKHCSBGrefine_11726:HG2_Ill_250bpfermikitraw_23522:HG2_PB_pbsv_17970;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23522:HG2_Ill_GATKHCSBGrefine_11726:HG2_Ill_GATKHC_28227:HG2_Ill_Krunchall_23842:HG2_Ill_SVrefine2DISCOVARplusDovetail_5931:HG2_Ill_SpiralSDKrefine_7740:HG2_Ill_manta_4776:HG2_Ill_scalpel_16624:HG2_Ill_svaba_22035:HG2_PB_SVrefine2PB10Xhap12_13081:HG4_Ill_250bpfermikitraw_23180:HG4_Ill_GATKHCSBGrefine_12108:HG4_Ill_GATKHC_28235:HG4_Ill_Krunchall_24215:HG4_Ill_SVrefine2DISCOVARDovetail_12477:HG4_Ill_manta_4063:HG4_Ill_scalpel_16255:HG4_Ill_svaba_22008;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0414508;ClusterMaxSizeDiff=0.0412371;ClusterMaxEditDist=0.103627;PBcalls=4;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-98;DistBack=16521;DistForward=-74;DistMin=-74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=71;REFWIDENED=19:16061357-16061525;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1729.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:28:0|1:33:3:1:25:0|1:44:2:1:35:0/1:37:18:./.:.:.:.:.:.
chr19	17459941	HG3_Ill_250bpfermikitraw_22887	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_17978:HG4_PB_SVrefine2Falcon1Dovetail_11167:HG3_PB_pbsv_17670:HG4_PB_assemblyticsfalcon_12181:HG3_PB_assemblyticsfalcon_12373:HG2_PB_assemblyticsfalcon_12323:HG2_PB_assemblyticsPBcR_11946:HG3_PB_HySA_27030:HG4_Ill_GATKHC_28253:HG4_Ill_GATKHCSBGrefine_12115:HG3_Ill_GATKHC_28154:HG3_Ill_GATKHCSBGrefine_11632:HG2_Ill_GATKHC_28245:HG2_Ill_GATKHCSBGrefine_11734:HG4_PB_SVrefine2PBcRDovetail_9004:HG4_Ill_SVrefine2DISCOVARDovetail_12487:HG3_Ill_manta_3915:HG3_Ill_SVrefine2DISCOVARDovetail_12694:HG2_PB_SVrefine2PBcRplusDovetail_5135:HG2_PB_SVrefine2PB10Xhap12_13089:HG2_PB_SVrefine2Falcon2Bionano_8817:HG2_Ill_SVrefine2DISCOVARplusDovetail_5942:HG2_CG_vcfBeta_10103:HG2_10X_SVrefine210Xhap12_12481:HG3_PB_SVrefine2PBcRDovetail_8764:HG3_PB_SVrefine2Falcon1Dovetail_11151:HG2_PB_SVrefine2PB10Xhap12_13088:HG2_PB_SVrefine2Falcon1plusDovetail_5583:HG2_PB_HySA_32637:HG4_PB_HySA_26092:HG4_Ill_svaba_22026:HG4_Ill_Krunchall_24233:HG4_Ill_250bpfermikitraw_23198:HG4_Ill_150bpfermikitraw_22305:HG4_10X_allpass_3231:HG3_Ill_svaba_22278:HG3_Ill_Krunchall_23467:HG3_Ill_250bpfermikitraw_22887:HG3_Ill_150bpfermikitraw_22207:HG3_10X_allpass_3382:HG2_Ill_svaba_22055:HG2_Ill_Krunchall_23864:HG2_Ill_250bpfermikitraw_23540:HG2_Ill_150bpfermikitraw_22168:HG2_10X_allpass_2745:HG4_PB_pbsv_17895;NumClusterSVs=46;ExactMatchIDs=HG2_10X_allpass_2745:HG2_Ill_150bpfermikitraw_22168:HG2_Ill_250bpfermikitraw_23540:HG2_Ill_Krunchall_23864:HG2_Ill_svaba_22055:HG3_10X_allpass_3382:HG3_Ill_150bpfermikitraw_22207:HG3_Ill_250bpfermikitraw_22887:HG3_Ill_Krunchall_23467:HG3_Ill_svaba_22278:HG4_10X_allpass_3231:HG4_Ill_150bpfermikitraw_22305:HG4_Ill_250bpfermikitraw_23198:HG4_Ill_Krunchall_24233:HG4_Ill_svaba_22026:HG4_PB_HySA_26092;NumExactMatchSVs=16;ClusterMaxShiftDist=0.103627;ClusterMaxSizeDiff=0.103627;ClusterMaxEditDist=0.132653;PBcalls=19;Illcalls=22;TenXcalls=4;CGcalls=1;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=14;HG4count=13;NumTechs=4;NumTechsExact=3;SVLEN=-94;DistBack=13277;DistForward=4677;DistMin=4677;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=33;REFWIDENED=19:17459934-17460060;PctSeqSimilarity=0.9922;PctSizeSimilarity=0.9894;PctRecOverlap=0.8421;SizeDiff=1;StartDistance=-15;EndDistance=-14;GTMatch=0;TruScore=94;MatchId=1730.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:36:1/1:2:16:0:16:1/1:0:5:0:8:1/1:0:31:./.:.:.:.:.:.
chr19	17574579	HG3_PB_SVrefine2PBcRDovetail_8765	AAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAAAGAAGAAGAAGAAAAGAAGAAGAAG	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_11735:HG2_PB_SVrefine2PB10Xhap12_13090:HG2_Ill_SVrefine2DISCOVARplusDovetail_5944:HG4_Ill_Spiral_1385:HG3_Ill_Spiral_18198:HG2_Ill_Spiral_1164:HG4_Ill_MetaSV_2337:HG3_Ill_MetaSV_2414:HG2_Ill_MetaSV_2271:HG4_PB_SVrefine2PBcRDovetail_9005:HG4_PB_SVrefine2Falcon1Dovetail_11168:HG4_Ill_SVrefine2DISCOVARDovetail_12489:HG3_PB_SVrefine2PBcRDovetail_8765:HG3_PB_SVrefine2Falcon1Dovetail_11152:HG3_Ill_SVrefine2DISCOVARDovetail_12695:HG2_PB_SVrefine2PBcRplusDovetail_5136:HG2_PB_SVrefine2Falcon2Bionano_8818:HG2_PB_SVrefine2Falcon1plusDovetail_5584:HG2_Ill_SVrefine2DISCOVARplusDovetail_5943:HG2_10X_SVrefine210Xhap12_12483:HG3_Ill_Krunchall_23469:HG2_Ill_Krunchall_23867:HG2_PB_HySA_32642:HG4_PB_HySA_26095:HG3_PB_HySA_27033:HG4_10X_allpass_3232:HG3_10X_allpass_3383:HG2_10X_allpass_2746:HG3_PB_pbsv_17671:HG4_PB_pbsv_17897:HG2_PB_pbsv_17979:HG4_Ill_manta_4066:HG4_PB_assemblyticsfalcon_12184:HG3_PB_assemblyticsfalcon_12376:HG2_PB_assemblyticsfalcon_12326:HG2_PB_assemblyticsPBcR_11950:HG4_Ill_GATKHCSBGrefine_12116:HG3_Ill_GATKHCSBGrefine_11633:HG2_Ill_manta_4779;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12483:HG2_Ill_SVrefine2DISCOVARplusDovetail_5943:HG2_PB_SVrefine2Falcon1plusDovetail_5584:HG2_PB_SVrefine2Falcon2Bionano_8818:HG2_PB_SVrefine2PBcRplusDovetail_5136:HG3_Ill_SVrefine2DISCOVARDovetail_12695:HG3_PB_SVrefine2Falcon1Dovetail_11152:HG3_PB_SVrefine2PBcRDovetail_8765:HG4_Ill_SVrefine2DISCOVARDovetail_12489:HG4_PB_SVrefine2Falcon1Dovetail_11168:HG4_PB_SVrefine2PBcRDovetail_9005;NumExactMatchSVs=11;ClusterMaxShiftDist=0.387464;ClusterMaxSizeDiff=0.387464;ClusterMaxEditDist=0.387464;PBcalls=18;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-178;DistBack=10654;DistForward=3363;DistMin=3363;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:17574580-17574758;PctSeqSimilarity=0.9797;PctSizeSimilarity=1;PctRecOverlap=0.8659;SizeDiff=0;StartDistance=-24;EndDistance=-24;GTMatch=0;TruScore=94;MatchId=1731.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:./.:0:1:0:0:./.:1:6:1:11:1/1:0:14:./.:.:.:.:.:.
chr19	17748482	HG3_Ill_MetaSV_2416	TCTAATTTAATCCAGTTCACCTCAACTCAATTCAAATGAGAGTGAGACTGATTCCAACTCTAGTCAACTGAATGTAAAGGAACAGAATGAAATCAAATTGAACTGAACACAGCTTATGTGTTATATCCTATCAGAACCTGGGTAGGGGCTGCCTCCAGCTCCCACAGCCTCCTGAGATCCCACTATCTCAATACTAACCATCCCTGTTTGTAAATTTCCAGTTTGTACATCTTTCCCTCATAATAGGCTATAAGCTCCTTATAGC	T	20	PASS	ClusterIDs=HG2_10X_allpass_2747:HG4_PB_pbsv_17900:HG2_PB_pbsv_17981:HG2_Ill_MetaSV_2272:HG4_PB_SVrefine2PBcRDovetail_9006:HG4_Ill_SVrefine2DISCOVARDovetail_12490:HG3_Ill_MetaSV_2416:HG2_PB_SVrefine2Falcon2Bionano_8819:HG2_PB_SVrefine2Falcon1plusDovetail_5585;NumClusterSVs=9;ExactMatchIDs=HG2_10X_allpass_2747:HG4_PB_SVrefine2PBcRDovetail_9006:HG4_Ill_SVrefine2DISCOVARDovetail_12490:HG3_Ill_MetaSV_2416:HG2_PB_SVrefine2Falcon2Bionano_8819:HG2_PB_SVrefine2Falcon1plusDovetail_5585;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0151515;ClusterMaxSizeDiff=0.0151515;ClusterMaxEditDist=0.0190476;PBcalls=5;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-264;DistBack=6430;DistForward=-263;DistMin=-263;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=260;REFWIDENED=19:17748483-17749006;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1732.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:22:0|1:32:0:0:18:./.:0:2:14:0:0/1:27:5:./.:.:.:.:.:.
chr19	17776786	HG3_Ill_Krunchall_23471	AATCAAGCCCAAGTCTCAGAACTCTCCTTCCTTCCTTCCTTTCTTCCTTCTTGTCTTTC	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22172:HG4_PB_HySA_26096:HG4_PB_pbsv_17901:HG2_PB_pbsv_17982:HG3_PB_pbsv_17674:HG4_Ill_svaba_22030:HG4_Ill_manta_4067:HG4_Ill_Krunchall_24236:HG4_Ill_GATKHCSBGrefine_12118:HG3_PB_HySA_27035:HG3_Ill_svaba_22280:HG3_Ill_manta_3916:HG3_Ill_Krunchall_23471:HG3_Ill_GATKHC_28158:HG3_Ill_GATKHCSBGrefine_11635:HG3_Ill_250bpfermikitraw_22889:HG2_Ill_svaba_22059:HG2_Ill_manta_4780:HG2_Ill_Krunchall_23869:HG2_Ill_GATKHCSBGrefine_11737:HG2_Ill_250bpfermikitraw_23545;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22172:HG4_Ill_svaba_22030:HG4_Ill_manta_4067:HG4_Ill_Krunchall_24236:HG4_Ill_GATKHCSBGrefine_12118:HG3_PB_HySA_27035:HG3_Ill_svaba_22280:HG3_Ill_manta_3916:HG3_Ill_Krunchall_23471:HG3_Ill_GATKHC_28158:HG3_Ill_GATKHCSBGrefine_11635:HG3_Ill_250bpfermikitraw_22889:HG2_Ill_svaba_22059:HG2_Ill_manta_4780:HG2_Ill_Krunchall_23869:HG2_Ill_GATKHCSBGrefine_11737:HG2_Ill_250bpfermikitraw_23545;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.0344828;PBcalls=5;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=27870;DistForward=141;DistMin=141;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=19:17776787-17776890;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1733.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:44:1/1:4:26:1:15:1/1:0:10:0:12:1/1:0:22:./.:.:.:.:.:.
chr19	18242060	HG4_PB_SVrefine2Falcon1Dovetail_11173	ACGCCTATAGTCCCAGCTACTCGGGAGGCTGAAGCAGGAGATTCGCTTGAACTCTAGAGGCGGAGCTTGCAGTGAGCCGAGACTGCGCCACTGCACTCTAGCCTGGGCAACAGAGCGGGCAACAGAGTGAGACTCTGTCTCAAAAAAATAAATAAAAATTTAAAAAATAGGCCAGGCGCGGTGGCCAACGCCTGTAATCTCAGCACTTTGGGAGGCCAAGGCTGGTGGATCACGAGGTCAAGAGATCGAGACCATCCTGACCAACATAGTGAAGCCCCATCTCTACTAAGAATACAAAAATTAGCTGGGTGTGGTGGTGTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12489:HG3_Ill_Spiral_18203:HG2_PB_HySA_32648:HG3_PB_pbsv_17678:HG3_Ill_scalpel_17000:HG3_Ill_GATKHCSBGrefine_11638:HG3_10X_allpass_3385:HG2_Ill_scalpel_16646:HG2_Ill_MetaSV_2274:HG2_Ill_GATKHCSBGrefine_11739:HG2_PB_pbsv_17985:HG4_PB_SVrefine2Falcon1Dovetail_11173:HG3_Ill_SVrefine2DISCOVARDovetail_12703:HG2_PB_SVrefine2PBcRplusDovetail_5139:HG2_PB_SVrefine2PB10Xhap12_13095:HG2_PB_SVrefine2Falcon1plusDovetail_5587:HG2_Ill_SVrefine2DISCOVARplusDovetail_5948;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12489:HG4_PB_SVrefine2Falcon1Dovetail_11173:HG3_Ill_SVrefine2DISCOVARDovetail_12703:HG2_PB_SVrefine2PBcRplusDovetail_5139:HG2_PB_SVrefine2PB10Xhap12_13095:HG2_PB_SVrefine2Falcon1plusDovetail_5587:HG2_Ill_SVrefine2DISCOVARplusDovetail_5948;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00623053;ClusterMaxSizeDiff=0.00623053;ClusterMaxEditDist=0.0436817;PBcalls=7;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=14368;DistForward=-235;DistMin=-235;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=115;REFWIDENED=19:18242061-18242495;PctSeqSimilarity=0.9343;PctSizeSimilarity=1;PctRecOverlap=0.6947;SizeDiff=0;StartDistance=-98;EndDistance=-98;GTMatch=0;TruScore=87;MatchId=1734.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:35:24:./.:24:21:8:1:./.:28:0:7:5:0/1:64:8:0/0:27:1:.:.:.
chr19	19258018	HG3_Ill_Cortex_1677	GAGGACCCCAGGCCAGATGGGGGTGCCAAGTCCAAGGGAGAAAATCCTGATGAGTTCAGGGGCCCAGCTCTACCTTCAGGAAGCCTTTGCTCCACCTCCCACCAGGCTCCCTACCTGCTCCTCCCCCTGCCCTAACCCTACAGGCTGGGGGAGCTTCTGTCTGGCTCTGCCTGTCCTTGACAGGTAGGTCCAGAGCCAAGACCTCTCACTTAGTGTAGAGTTGGCACTGAGGGGGCTGCACAGAGTGTTTGATGAATCAAAGATGAAATGAAGGA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2580:HG2_PB_assemblyticsPBcR_11975:HG4_PB_HySA_26116:HG2_PB_HySA_32666:HG4_PB_assemblyticsfalcon_12202:HG3_PB_assemblyticsfalcon_12393:HG2_PB_pbsv_17993:HG2_Ill_Krunchall_23882:HG2_PB_SVrefine2Falcon2Bionano_8827:HG2_Ill_MetaSV_2278:HG4_PB_SVrefine2PBcRDovetail_9016:HG4_PB_SVrefine2Falcon1Dovetail_11180:HG4_Ill_scalpel_16284:HG4_Ill_manta_4070:HG4_Ill_SVrefine2DISCOVARDovetail_12501:HG4_Ill_MetaSV_2345:HG4_Ill_GATKHCSBGrefine_12127:HG4_Ill_Cortex_1635:HG3_PB_SVrefine2Falcon1Dovetail_11163:HG3_Ill_scalpel_17011:HG3_Ill_MetaSV_2424:HG3_Ill_GATKHCSBGrefine_11643:HG3_Ill_Cortex_1677:HG3_10X_allpass_3388:HG2_PB_SVrefine2PBcRplusDovetail_5146:HG2_PB_SVrefine2PB10Xhap12_13102:HG2_PB_SVrefine2Falcon1plusDovetail_5595:HG2_Ill_scalpel_16655:HG2_Ill_manta_4784:HG2_Ill_SpiralSDKrefine_7761:HG2_Ill_SVrefine2DISCOVARplusDovetail_5956:HG2_Ill_GATKHCSBGrefine_11746:HG2_Ill_Cortex_3911:HG2_10X_allpass_2749:HG2_10X_SVrefine210Xhap12_12502:HG2_PB_assemblyticsfalcon_12343:HG4_PB_pbsv_17914:HG3_PB_pbsv_17685;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12502:HG2_10X_allpass_2749:HG2_Ill_Cortex_3911:HG2_Ill_GATKHCSBGrefine_11746:HG2_Ill_SVrefine2DISCOVARplusDovetail_5956:HG2_Ill_SpiralSDKrefine_7761:HG2_Ill_manta_4784:HG2_Ill_scalpel_16655:HG2_PB_SVrefine2Falcon1plusDovetail_5595:HG2_PB_SVrefine2PB10Xhap12_13102:HG2_PB_SVrefine2PBcRplusDovetail_5146:HG3_10X_allpass_3388:HG3_Ill_Cortex_1677:HG3_Ill_GATKHCSBGrefine_11643:HG3_Ill_MetaSV_2424:HG3_Ill_scalpel_17011:HG3_PB_SVrefine2Falcon1Dovetail_11163:HG4_Ill_Cortex_1635:HG4_Ill_GATKHCSBGrefine_12127:HG4_Ill_MetaSV_2345:HG4_Ill_SVrefine2DISCOVARDovetail_12501:HG4_Ill_manta_4070:HG4_Ill_scalpel_16284:HG4_PB_SVrefine2Falcon1Dovetail_11180:HG4_PB_SVrefine2PBcRDovetail_9016;NumExactMatchSVs=25;ClusterMaxShiftDist=0.025641;ClusterMaxSizeDiff=0.025641;ClusterMaxEditDist=0.0256881;PBcalls=16;Illcalls=19;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=8;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-274;DistBack=30665;DistForward=19746;DistMin=19746;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=19:19258019-19258296;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1736.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:43:1/1:2:11:2:19:1/1:0:12:0:16:1/1:0:49:./.:.:.:.:.:.
chr19	19834443	HG4_PB_pbsv_17919	ATTGGAATAGTTTCAGAAGGAATGGTACCAGCTACTCTTTGTACCTCTGGTAGAATCTGGCTGTGAATCCATCTGGTCCTGGGCTTTTTTTGGTTGGTACGCTACTAACTGTTGCTTCAATTTCAGAGCCTGTTATTGGTCTATTCAGGGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGGGTGTATGTCCAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTATACTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCAGTGGTGATATCCCCTTTATCATTTTTTATTGCATCTATTTGATTCTTCTCTCTTTTATTCTTTATTAGTCTTGCTAGCAGTCTATCAATTTTGTTGATCTTTTTGAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGAGTTTTTTGTGTCTCTATCTCCTTCAGTTCTGCTCTGATCTTAGTTATTTCTTGCTTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTCTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTAGATCTTTCCTGCTTTCTCTTGTGGGCATTTCGTGCTATAAATTTCCCTCTACACGCTGCTTTAAATGTGTCCCAGAGATTCTGGTATGTTTTGTCTTTGTTCTCACTGGTTTCAAAGAACATGTTTATTTCTGCCTTCATTTCGTTATGCACCCAATAGTCATTCAGGAGCAGGTTGTTCAGTTTCGATGCAGTTGAGTGGTTTTGAGTTAGTTTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGACAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGTGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAAGTGCGATGTGATGCTGAGAAGAATGTACATTCTGTTGATTTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTAGATATCTTGTTAACTTTCTGTCTTGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTATTGTGTGGGAGTCTAAGTCTCTTTGTAGGTCTCTAAGGGCTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAGGATAGTTAGCTCTTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTACTTTTGTTTGTTTTCCATTTGGTTGGTAGATCTTCCTTTGTCCCTTTATCTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTCTCCTGAATACAGCACACTGATGGGTGTTGACTCTTTATCCAATTTGCCAGTCTGTGTCTTTTAATTGGAGCATTTACCCCACTTACATTTAAGGTTAATATTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTAGTTATTTTGCTTGTTAGTTGATGCAGTTTCTTCCTAGCATCAACGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGGTACCAGTTGTTCCCTTCCATGTTTAGTGCTTCCCTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGTTTGTCTGTAAAGGATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGTTTCTGCCGAGAGATTTGCTGTTAGTCTGATGGGCTTCCCTCTGTGGGGAACAAGACCTTTCTCTCTGGCTGCCCTTAACATTTTTCCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTATCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCATTCTCTGTATTTCCTGAATTTGAATGTTGGCCTGCCTTGCTAGGTTGGGGAAGTTCTCCTGGATAATATCCTGAAGAGTGTTTTCCAACTTGGTTCCATTCTCCCCGTCACTTTCAGGTATACCAATCAGATGTAGATTTGTATTTTCACATAGTCCCAAATTTCTTGGAGGCTTTGTTAATTTCTTTTTACTCTTTTTTTCTCTAAAGTTCTCTTCTCACTTCATTTCATTCATTTGATCTTCAATCACTGATACCCTTTCTCCCACTTGATGAAATCAGCTACTGAAGCTTGTGCATGCATCAAGTAGTTCTCGTGCCACGGTTTTCAGCTCCATCAGGTCATTTAAGGTCTTCTCCACACTGTTTATTCTAGTTAGCCATTCGTCTAATCTTTTTTCAAGGTTTTTAGCTTCTTTGCGATGGGTCTGAACATCCTCCTTTAGCTCAGAGAAGTTTGTTATTACCAGTCATCTGAAGCCTTCTTCTCTCAACTCATCAAAGTAATTCTCTCCGTCCAGCTTTGTTCCATTGCTGGCAAAGAGCTGCATTCCTTTGGAGGAGAAGAGGTGCTCTGATTTTTAGAATTTTCAGCTTTTCTGCTCTGGTTTCTTCCCATCTTTGTGGTTTTATCTACCTCTGGTCTTTGATGATGGTGACGTACAAATGGGGTTTTGGTGTGGATGTCCTTTCTGTTTGTTAGTTTTCCTCCTAACAGTCAGGACCCTCAGCTGCAGGTTGGTTGGAGTTTGCTGGAGGTCCACTCCAGACCATTTGCCTGGATATCACCAGCGGAGGCTGCAGAACAGCAAATATTGCAGAACGGCAAATGTTGCTGCCTGATCCTTCCTCTTGAAGCTTCGTCTCAGAGGGGCACCCGGCTGTATGAGGTGTCAGTTGGCCCCTATTGGGAGGTGTCTCCCAGTTAGGCTACTCAGGGGTCAGGGACCCATTTGAGGAGGCAGTCTGTCCGTTCTCAGATCTCAAAATCCATGCTGGGAGAACCACTACTCTCTTCAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAAGTTTCTGCTGCCTTTTGTTCAGCTATGCCCTGCCCCCAGAGGTGGAGTCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGAGCTCCACCCAGTTCGAGCTTCCCAGCCGCTTTGTTTACCTACTCAAGCCTCAGCAATGACGGACGCCCCTTCCCCAGCCTTGCTGCCGACTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAGTGAAAGAGGCTCCGTGGGTGTGGGACCCTCCGAGCCAGGCATGGGATATAATCTCCTGGTGTGTCATTTGCTAAGACTGTTGGAAAAGTGCAGTATTAGGGTGGAAGTGTCCCGATTTTCCAGATACCATCTTTCACGGCTTCCCTTGACTAGGAAAGGGAATTCCCCGACCCCTTGCACTTCCCAAGTGAGGCAATGCCCCGCCCTGCTCCATGGGCTGCACCCACTGTCTGCCAAGCCCCAGTGAGATGAACCTGGTACCTCAGTTGGAAATGCAGAAATCACCCATCTTCTGCATTGCTCATGCAGGGAGCTGTAGACTGGAGCTGTTCCTATTTGGCCATCTTGGAGCCTCAAGGCCGAGTACTGTTATATCTTAGTTGTTACAGTGTTATGTTTAATCAGATACATATTACATATCCAATAATTAATATAAAACATAGGATTGACACAAATAGACTAAAATAGTTAATTTTTTTCTTTTTTTGTAGTGATGGGGTCTCCCTATGTTGCTGGTCTCAAGTCATCCTCCCGCCTTGACCTTCCGAAGTGCTGGGATTATAGGTGTGAGGCAATGCACGCAGCCTAAAATATTTTAGAATATAAAAGGGATATAACAGATACAACAACTACTACTACTACTACTTCTGTTCCTACCACTCCTACTAAAGCCACCGTAAAAATTCCTGAGCCTCGAATACATAGATATCCAACAATGCCAACTCATACCTAAAATCACACGATTACCAGAACACACTCCACATGTACTTGATGAAAATATATTCTTTTTTGAACAACTGCCAGAAAAATCAAGGGACTAATAATATGTAGTCTCAGACCATTTGAAATGAATGCCTAAAGAGTTTCTACACACACATCCAATCAATGCATCTTTATAGACGCTTGGCATGTATTCCCAAACACCCCTTAGAAGACCACATAAATGCGACTCAACCAATGTATGTAGCTATAATCAAGCATTCAATAACATCTCAAACCAATGGACAGCACACATAATAATAGAAAAATGCTACCAGAAACAGACATGCCAATCCAAACAGATCATTACCCAGCCTGGCCATCATGGTGAAACTCCGTCTCTACTAAAAATACAAAAATTAGCTGGCATGGTGGCTCATGCCTATAATCCCAGCCACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGATGTGGAGGTTGCAGTGAGCCAAGATCGCACCATTGCACTCCAGCCTGGGCAACACAGTGAGACTCTTGTCTCAAACAAAACAAAACAAAACAAACAAAAAAACACAACAACAAAACAAAACAGATCATTAGATAAAAGCAATCTGTCAGACCAAACACCAATCCCAGTACCACAGTCAAACCATATACTGGGGCCAGGTGCAGAGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGCCGTGGTGGGTGGATCACAAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAATCCCGACTCTAATAAAAATACAAAAAGTAGCCAGGCATGGTGGCAGGCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAAACTGGAAGGCAGAGGTTGCAGTGAGCCAAGATCGAGCCACTGCACTCCAGACTGTGCGAAAGTGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAACATATACTGGAAGAACTAACATGACAAGCTTAAATATGATATATACTCCTATGAGTCATTTGTTGATACTTGATGTGAATTCTGGTACCAATCTGAACTCGAAGGAAGTAAAGATTATGATTACAAAGCAGATCTAAAAGATGGTACAACACCAGACACAGCTATCACACCAATCATTCATATTACATATACCCAACTTTCAGACCTCCACGGGAAAAAATACCAATGCCACTGGGATACCCATTGGACTGTGATATATAATAGAAGAGGATAAGACATACTATAATGATTCTCTAACTTTCCACTTTTGAGAAATT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12506:HG4_10X_allpass_3237:HG3_10X_allpass_3389:HG3_PB_pbsv_17690:HG3_Ill_Krunchall_23488:HG2_PB_pbsv_17998:HG3_PB_assemblyticsfalcon_12400:HG2_PB_assemblyticsfalcon_12351:HG2_10X_allpass_2751:HG2_PB_assemblyticsPBcR_11982:HG3_PB_HySA_27051:HG2_Ill_tnscope_1901:HG4_PB_pbsv_17919:HG4_Ill_MetaSV_2349:HG3_PB_SVrefine2PBcRDovetail_8775:HG3_PB_SVrefine2Falcon1Dovetail_11166:HG3_Ill_MetaSV_2426:HG2_PB_SVrefine2PBcRplusDovetail_5149:HG2_PB_SVrefine2PB10Xhap12_13105:HG2_PB_SVrefine2Falcon2Bionano_8830:HG2_PB_SVrefine2Falcon1plusDovetail_5598:HG2_Ill_MetaSV_2280;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12506:HG4_PB_pbsv_17919:HG4_Ill_MetaSV_2349:HG3_PB_SVrefine2PBcRDovetail_8775:HG3_PB_SVrefine2Falcon1Dovetail_11166:HG3_Ill_MetaSV_2426:HG2_PB_SVrefine2PBcRplusDovetail_5149:HG2_PB_SVrefine2PB10Xhap12_13105:HG2_PB_SVrefine2Falcon2Bionano_8830:HG2_PB_SVrefine2Falcon1plusDovetail_5598:HG2_Ill_MetaSV_2280;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00249305;ClusterMaxSizeDiff=0.00249305;ClusterMaxEditDist=0.00249305;PBcalls=13;Illcalls=5;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-5219;DistBack=9799;DistForward=-5219;DistMin=-5219;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=19:19834444-19839665;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1737.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:52:0|1:32:0:3:27:0|1:57:0:0:29:0/1:60:29:0/1:383:189:5218:.:.
chr19	19996080	HG2_PB_SVrefine2PBcRplusDovetail_5151	CTTTCTTTCTTTCTTTCTTTCTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTTTCTTTCTTTTCTTTCTTTTCTTTCTTTTCTTTCTTTCTTTTCTT	TTG	20	PASS	ClusterIDs=HG2_PB_pbsv_18001:HG2_PB_assemblyticsPBcR_11984:HG2_PB_SVrefine2PBcRplusDovetail_5151:HG2_PB_SVrefine2PB10Xhap12_13108:HG3_PB_SVrefine2PBcRDovetail_8777:HG2_PB_SVrefine2Falcon2Bionano_8832:HG2_Ill_SVrefine2DISCOVARplusDovetail_5960:HG2_PB_SVrefine2Falcon1plusDovetail_5600:HG2_PB_assemblyticsfalcon_12353:HG3_Ill_manta_3919:HG3_Ill_scalpel_17020:HG3_PB_HySA_27056:HG2_PB_HySA_32668:HG3_PB_pbsv_17692;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5151:HG2_PB_assemblyticsPBcR_11984;NumExactMatchSVs=2;ClusterMaxShiftDist=0.207792;ClusterMaxSizeDiff=0.207792;ClusterMaxEditDist=0.207792;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-136;DistBack=-27;DistForward=-137;DistMin=-137;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=19:19996080-19996218;PctSeqSimilarity=0.9355;PctSizeSimilarity=0.9444;PctRecOverlap=0.9103;SizeDiff=-8;StartDistance=13;EndDistance=7;GTMatch=0;TruScore=93;MatchId=1738.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:0|1:28:2:3:27:./.:23:2:2:13:0/1:38:13:./.:.:.:.:.:.
chr19	20174679	HG3_Ill_GATKHCSBGrefine_11649	AGAAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGCGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGACTACAGGAGCCCGCCACCGCTCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTACCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12508:HG2_PB_assemblyticsfalcon_12354:HG4_PB_assemblyticsfalcon_12213:HG4_10X_allpass_3238:HG4_PB_HySA_26122:HG3_PB_pbsv_17693:HG2_PB_HySA_32670:HG3_Ill_MetaSV_2427:HG4_PB_pbsv_17922:HG4_Ill_MetaSV_2350:HG4_Ill_GATKHCSBGrefine_12130:HG3_PB_assemblyticsfalcon_12403:HG3_Ill_manta_3920:HG3_Ill_GATKHCSBGrefine_11649:HG2_PB_pbsv_18002:HG2_PB_SVrefine2Falcon1plusDovetail_5601:HG2_Ill_GATKHCSBGrefine_11753:HG4_PB_SVrefine2PBcRDovetail_9020:HG4_PB_SVrefine2Falcon1Dovetail_11183:HG3_PB_SVrefine2Falcon1Dovetail_11168:HG2_PB_SVrefine2PB10Xhap12_13110;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11753:HG2_PB_SVrefine2Falcon1plusDovetail_5601:HG2_PB_pbsv_18002:HG3_Ill_GATKHCSBGrefine_11649:HG3_Ill_manta_3920:HG3_PB_assemblyticsfalcon_12403:HG4_Ill_GATKHCSBGrefine_12130:HG4_Ill_MetaSV_2350:HG4_PB_pbsv_17922;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0929487;ClusterMaxSizeDiff=0.0929487;ClusterMaxEditDist=0.0929487;PBcalls=13;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-318;DistBack=18733;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=19:20174676-20175008;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1739.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:28:0|1:32:0:0:27:./.:0:2:39:0:0/1:21:4:0/1:21:12:.:.:.
chr19	21513957	HG3_PB_SVrefine2Falcon1Dovetail_11177	TAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12516:HG3_PB_pbsv_17703:HG4_PB_HySA_26138:HG3_PB_HySA_27072:HG4_Ill_scalpel_16310:HG4_Ill_GATKHCSBGrefine_12143:HG3_Ill_scalpel_17033:HG3_Ill_GATKHCSBGrefine_11657:HG2_Ill_SVrefine2DISCOVARplusDovetail_5972:HG2_Ill_GATKHC_28300:HG2_Ill_GATKHCSBGrefine_11763:HG4_PB_pbsv_17936:HG2_PB_pbsv_18013:HG4_PB_SVrefine2PBcRDovetail_9030:HG4_PB_SVrefine2Falcon1Dovetail_11195:HG4_Ill_SVrefine2DISCOVARDovetail_12513:HG3_PB_SVrefine2PBcRDovetail_8783:HG3_PB_SVrefine2Falcon1Dovetail_11177:HG3_Ill_SVrefine2DISCOVARDovetail_12725:HG2_PB_SVrefine2PBcRplusDovetail_5160:HG2_PB_SVrefine2PB10Xhap12_13120:HG2_PB_SVrefine2Falcon2Bionano_8839:HG2_PB_SVrefine2Falcon1plusDovetail_5607:HG2_Ill_SVrefine2DISCOVARplusDovetail_5971;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12516:HG4_PB_SVrefine2PBcRDovetail_9030:HG4_PB_SVrefine2Falcon1Dovetail_11195:HG4_Ill_SVrefine2DISCOVARDovetail_12513:HG3_PB_SVrefine2PBcRDovetail_8783:HG3_PB_SVrefine2Falcon1Dovetail_11177:HG3_Ill_SVrefine2DISCOVARDovetail_12725:HG2_PB_SVrefine2PBcRplusDovetail_5160:HG2_PB_SVrefine2PB10Xhap12_13120:HG2_PB_SVrefine2Falcon2Bionano_8839:HG2_PB_SVrefine2Falcon1plusDovetail_5607:HG2_Ill_SVrefine2DISCOVARplusDovetail_5971;NumExactMatchSVs=12;ClusterMaxShiftDist=0.016;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.0160428;PBcalls=13;Illcalls=10;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-187;DistBack=24098;DistForward=-24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=157;REFWIDENED=19:21513958-21514301;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0.9574;SizeDiff=0;StartDistance=-8;EndDistance=-8;GTMatch=0;TruScore=98;MatchId=1742.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:9:0:16:./.:0:7:1:4:1/1:0:11:./.:.:.:.:.:.
chr19	21959599	HG3_PB_SVrefine2PBcRDovetail_8787	ATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGACCACAAGGTCAGGAGTTTGAGACCAGCCTGGCCAATATGGTGAAACCCCATCTCTACTAAAAATACCACAATTAGCCAGGAGTGGTGGTGGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12519:HG3_PB_pbsv_17709:HG4_PB_pbsv_17941:HG2_PB_pbsv_18018:HG4_PB_SVrefine2PBcRDovetail_9033:HG4_PB_SVrefine2Falcon1Dovetail_11199:HG4_10X_allpass_3241:HG3_PB_SVrefine2PBcRDovetail_8787:HG3_PB_SVrefine2Falcon1Dovetail_11180:HG3_Ill_150bpfermikitraw_22256:HG3_10X_allpass_3391:HG2_PB_SVrefine2PBcRplusDovetail_5163:HG2_PB_SVrefine2PB10Xhap12_13124:HG2_PB_SVrefine2Falcon2Bionano_8841:HG2_PB_SVrefine2Falcon1plusDovetail_5610:HG2_Ill_SVrefine2DISCOVARplusDovetail_5976;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12519:HG4_PB_SVrefine2PBcRDovetail_9033:HG4_PB_SVrefine2Falcon1Dovetail_11199:HG4_10X_allpass_3241:HG3_PB_SVrefine2PBcRDovetail_8787:HG3_PB_SVrefine2Falcon1Dovetail_11180:HG3_Ill_150bpfermikitraw_22256:HG3_10X_allpass_3391:HG2_PB_SVrefine2PBcRplusDovetail_5163:HG2_PB_SVrefine2PB10Xhap12_13124:HG2_PB_SVrefine2Falcon2Bionano_8841:HG2_PB_SVrefine2Falcon1plusDovetail_5610:HG2_Ill_SVrefine2DISCOVARplusDovetail_5976;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0151515;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.030303;PBcalls=11;Illcalls=2;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=3;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-133;DistBack=43484;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=170;REFWIDENED=19:21959600-21959902;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1743.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:0:27:0:24:./.:0:2:0:1:1/1:0:13:./.:.:.:.:.:.
chr19	23078045	HG3_Ill_scalpel_17044	CTATCTATGTATCTATCTATCTATCATCTATCTATCTATGTATCTATCTATG	C	20	PASS	ClusterIDs=HG2_PB_pbsv_18028:HG3_PB_HySA_27081:HG4_Ill_scalpel_16323:HG2_PB_HySA_32695:HG4_Ill_svaba_22095:HG4_Ill_Krunchall_24311:HG4_Ill_GATKHC_28337:HG4_Ill_GATKHCSBGrefine_12154:HG4_Ill_250bpfermikitraw_23269:HG4_Ill_150bpfermikitraw_22378:HG2_PB_assemblyticsPBcR_12022:HG2_Ill_svaba_22112:HG2_Ill_Krunchall_23933:HG2_Ill_GATKHC_28320:HG2_Ill_GATKHCSBGrefine_11773:HG2_Ill_250bpfermikitraw_23604:HG2_Ill_150bpfermikitraw_22231:HG3_PB_pbsv_17719:HG3_PB_assemblyticsfalcon_12449:HG4_PB_assemblyticsfalcon_12255:HG3_Ill_svaba_22330:HG3_Ill_scalpel_17044:HG3_Ill_manta_3926:HG3_Ill_Krunchall_23526:HG3_Ill_GATKHC_28221:HG3_Ill_GATKHCSBGrefine_11663:HG3_Ill_250bpfermikitraw_22944:HG3_Ill_150bpfermikitraw_22266:HG2_Ill_svaba_22111:HG2_Ill_Krunchall_23932:HG2_Ill_GATKHC_28319:HG2_Ill_GATKHCSBGrefine_11772:HG2_Ill_250bpfermikitraw_23603:HG2_Ill_150bpfermikitraw_22230:HG2_PB_assemblyticsfalcon_12395:HG4_Ill_svaba_22094:HG4_Ill_Krunchall_24310:HG4_Ill_250bpfermikitraw_23268:HG4_Ill_150bpfermikitraw_22377;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22230:HG2_Ill_250bpfermikitraw_23603:HG2_Ill_GATKHCSBGrefine_11772:HG2_Ill_GATKHC_28319:HG2_Ill_Krunchall_23932:HG2_Ill_svaba_22111:HG3_Ill_150bpfermikitraw_22266:HG3_Ill_250bpfermikitraw_22944:HG3_Ill_GATKHCSBGrefine_11663:HG3_Ill_GATKHC_28221:HG3_Ill_Krunchall_23526:HG3_Ill_manta_3926:HG3_Ill_scalpel_17044:HG3_Ill_svaba_22330:HG4_PB_assemblyticsfalcon_12255;NumExactMatchSVs=15;ClusterMaxShiftDist=0.37037;ClusterMaxSizeDiff=0.37037;ClusterMaxEditDist=0.37037;PBcalls=8;Illcalls=31;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=12;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=30730;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=82;REFWIDENED=19:23078021-23078153;PctSeqSimilarity=0.9586;PctSizeSimilarity=0.9107;PctRecOverlap=0.3684;SizeDiff=-5;StartDistance=-31;EndDistance=-36;GTMatch=0;TruScore=74;MatchId=1744.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:0:22:0:16:./.:3:13:5:11:./.:2:35:./.:.:.:.:.:.
chr19	23320788	HG4_Ill_manta_4076	TGAAAATGGCTTTCACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12530:HG4_10X_allpass_3243:HG2_10X_allpass_2756:HG2_Ill_Krunchall_23939:HG2_PB_assemblyticsPBcR_12027:HG2_PB_pbsv_18033:HG2_PB_PB10Xdip_14778:HG4_PB_pbsv_17957:HG2_PB_SVrefine2PB10Xhap12_13136:HG4_PB_HySA_26158:HG4_Ill_MetaSV_2361:HG2_Ill_tnscope_1903:HG2_Ill_MetaSV_2290:HG4_PB_SVrefine2PBcRDovetail_9040:HG4_Ill_scalpel_16325:HG4_Ill_manta_4076:HG4_Ill_SVrefine2DISCOVARDovetail_12526:HG4_Ill_GATKHCSBGrefine_12169:HG3_PB_assemblyticsfalcon_12452:HG3_PB_SVrefine2Falcon1Dovetail_11188:HG2_PB_SVrefine2PBcRplusDovetail_5171:HG2_PB_SVrefine2PB10Xhap12_13135:HG2_Ill_manta_4791:HG2_Ill_breakscan11_2582:HG2_Ill_GATKHCSBGrefine_11774;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12530:HG4_PB_SVrefine2PBcRDovetail_9040:HG4_Ill_scalpel_16325:HG4_Ill_manta_4076:HG4_Ill_SVrefine2DISCOVARDovetail_12526:HG4_Ill_GATKHCSBGrefine_12169:HG3_PB_assemblyticsfalcon_12452:HG3_PB_SVrefine2Falcon1Dovetail_11188:HG2_PB_SVrefine2PBcRplusDovetail_5171:HG2_PB_SVrefine2PB10Xhap12_13135:HG2_Ill_manta_4791:HG2_Ill_breakscan11_2582:HG2_Ill_GATKHCSBGrefine_11774;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0963082;ClusterMaxSizeDiff=0.0963082;ClusterMaxEditDist=0.0963082;PBcalls=11;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=2764;DistForward=10331;DistMin=2764;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=19:23320789-23321120;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1745.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:27:0|1:23:6:0:11:1|0:0:12:45:1:0/1:36:19:0/1:34:8:.:.:.
chr19	23768862	HG2_PB_SVrefine2Falcon2Bionano_8850	TGTATAATTTCTCCTGAAAGATATTTTATGTATTTTTTATTTTTATTTTCATTTTGTTATTTTTTTCTTTGCTCTGTCTTGCCCTGTTGCCCAGGCTGGAGTGCATGGGTGCAGTCTTGACTCACTGTGACCTCCTGAAATTATAATTTCTCAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12532:HG2_PB_pbsv_18038:HG4_PB_pbsv_17964:HG3_PB_pbsv_17727:HG4_Ill_250bpfermikitraw_23280:HG4_Ill_150bpfermikitraw_22389:HG2_Ill_250bpfermikitraw_23616:HG2_Ill_150bpfermikitraw_22241:HG4_PB_SVrefine2PBcRDovetail_9042:HG4_Ill_SVrefine2DISCOVARDovetail_12533:HG3_PB_SVrefine2PBcRDovetail_8795:HG2_PB_SVrefine2PBcRplusDovetail_5174:HG2_PB_SVrefine2PB10Xhap12_13140:HG2_PB_SVrefine2Falcon2Bionano_8850:HG2_PB_SVrefine2Falcon1plusDovetail_5621:HG2_Ill_SVrefine2DISCOVARplusDovetail_5988;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12532:HG4_PB_SVrefine2PBcRDovetail_9042:HG4_Ill_SVrefine2DISCOVARDovetail_12533:HG3_PB_SVrefine2PBcRDovetail_8795:HG2_PB_SVrefine2PBcRplusDovetail_5174:HG2_PB_SVrefine2PB10Xhap12_13140:HG2_PB_SVrefine2Falcon2Bionano_8850:HG2_PB_SVrefine2Falcon1plusDovetail_5621:HG2_Ill_SVrefine2DISCOVARplusDovetail_5988;NumExactMatchSVs=9;ClusterMaxShiftDist=0.025641;ClusterMaxSizeDiff=0.0254777;ClusterMaxEditDist=0.0961538;PBcalls=9;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=2;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-154;DistBack=17705;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=296;REFWIDENED=19:23768863-23769312;PctSeqSimilarity=0.9278;PctSizeSimilarity=0.9747;PctRecOverlap=0.4277;SizeDiff=-4;StartDistance=-87;EndDistance=-91;GTMatch=0;TruScore=77;MatchId=1746.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:45:1/1:2:24:2:15:0/0:21:1:13:0:0/0:65:0:./.:.:.:.:.:.
chr19	23986395	HG3_Ill_SVrefine2DISCOVARDovetail_12746	AAAAAAATCAGTGACAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_23954:HG3_PB_assemblyticsfalcon_12468:HG2_PB_assemblyticsfalcon_12422:HG2_PB_pbsv_18044:HG2_PB_assemblyticsPBcR_12043:HG4_PB_HySA_26178:HG4_Ill_GATKHCSBGrefine_12175:HG3_Ill_GATKHCSBGrefine_11670:HG2_Ill_GATKHCSBGrefine_11782:HG4_PB_SVrefine2Falcon1Dovetail_11213:HG4_PB_SVrefine2PBcRDovetail_9047:HG4_Ill_SVrefine2DISCOVARDovetail_12535:HG3_PB_SVrefine2PBcRDovetail_8799:HG3_PB_SVrefine2Falcon1Dovetail_11194:HG3_Ill_SVrefine2DISCOVARDovetail_12746:HG2_PB_SVrefine2PBcRplusDovetail_5178:HG2_PB_SVrefine2PB10Xhap12_13145:HG2_PB_SVrefine2Falcon2Bionano_8855:HG2_PB_SVrefine2Falcon1plusDovetail_5625:HG2_Ill_SVrefine2DISCOVARplusDovetail_5991:HG2_10X_SVrefine210Xhap12_12535:HG2_Ill_tnscope_1904:HG4_Ill_manta_4078:HG3_Ill_manta_3928:HG2_PB_PB10Xdip_14811:HG2_Ill_manta_4795:HG4_Ill_MetaSV_2367:HG2_Ill_MetaSV_2293:HG3_PB_HySA_27098:HG2_PB_HySA_32718:HG4_Ill_scalpel_16335:HG4_10X_allpass_3244:HG3_Ill_scalpel_17053:HG3_Ill_MetaSV_2445:HG3_10X_allpass_3393:HG2_Ill_scalpel_16697:HG2_Ill_breakscan11_2584:HG2_10X_allpass_2757:HG4_PB_pbsv_17971:HG4_PB_assemblyticsfalcon_12273:HG4_Ill_Krunchall_24327:HG3_PB_pbsv_17734:HG3_Ill_Krunchall_23539;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12535:HG2_Ill_SVrefine2DISCOVARplusDovetail_5991:HG2_PB_SVrefine2Falcon1plusDovetail_5625:HG2_PB_SVrefine2Falcon2Bionano_8855:HG2_PB_SVrefine2PB10Xhap12_13145:HG2_PB_SVrefine2PBcRplusDovetail_5178:HG3_Ill_SVrefine2DISCOVARDovetail_12746:HG3_PB_SVrefine2Falcon1Dovetail_11194:HG3_PB_SVrefine2PBcRDovetail_8799:HG4_Ill_SVrefine2DISCOVARDovetail_12535:HG4_PB_SVrefine2PBcRDovetail_9047;NumExactMatchSVs=11;ClusterMaxShiftDist=0.10443;ClusterMaxSizeDiff=0.10443;ClusterMaxEditDist=0.10443;PBcalls=19;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=17858;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=19:23986396-23986732;PctSeqSimilarity=0.9969;PctSizeSimilarity=0.9938;PctRecOverlap=0.9938;SizeDiff=-2;StartDistance=2;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1747.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:39:1/1:0:17:0:17:1/1:0:14:0:20:1/1:0:46:./.:1:16:.:.:.
chr19	24224791	HG2_Ill_scalpel_16699	GTGCACCAGTCGACACTCTGTATCTAGCTGCTCTGGTGAGGACGTGGAGAACATTTATGTGTAGCTCAAGGATTGTAAATACACCAATCGGCACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTTTAGCTCAAGGTTTGTGAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12538:HG2_PB_HySA_32724:HG2_PB_pbsv_18050:HG3_PB_pbsv_17740:HG3_Ill_scalpel_17055:HG3_Ill_GATKHCSBGrefine_11673:HG3_10X_allpass_3394:HG2_Ill_scalpel_16699:HG2_Ill_GATKHCSBGrefine_11783:HG2_10X_allpass_2758:HG3_PB_HySA_27105:HG3_PB_SVrefine2PBcRDovetail_8804:HG3_Ill_SVrefine2DISCOVARDovetail_12751:HG2_PB_SVrefine2PB10Xhap12_13150;NumClusterSVs=14;ExactMatchIDs=HG2_10X_allpass_2758:HG2_Ill_GATKHCSBGrefine_11783:HG2_Ill_scalpel_16699:HG3_10X_allpass_3394:HG3_Ill_GATKHCSBGrefine_11673:HG3_Ill_scalpel_17055;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00625;ClusterMaxSizeDiff=0.00623053;ClusterMaxEditDist=0.0434783;PBcalls=6;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-160;DistBack=34595;DistForward=-160;DistMin=-160;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=259;REFWIDENED=19:24224584-24225002;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1748.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:33:0|1:41:0:1:30:0|1:27:0:0:11:0/1:28:10:./.:.:.:.:.:.
chr19	24573555	HG3_Ill_MetaSV_2449	TTTGAGGCCTATGGTGGAAAAGGAAATAACTTCACATAAAATCTACACAGAAGCGTTCTGAGAAACTACTTTGTGGTGTGTGCACTCATCTCACAGAGTTGAACCTTTCTTTTGATTGAGCACTTTTGAACACCCTTTTTGTAGAATCTGCAAGTGGATATTTAGAATTCTTTGTGGACTATTGTGGAAAAGGAAATATCTTCACTTAAAAACTACACAGAATACTGAGAAACTTATTTGTGATGTGTGCATTCATCTCAAAGTATTGAAGATTTCTTTTGATTGAGCAGTTTGGAAAATTCTTTTTGAAGAATCTGAAAGTGGATATCTGGAGCCATTTGAGGCCTAAGGTGGAAAAGGAAATATCTTCACACAACCACTACACAGAAGCATTCTGGGAAAGTTCTTTCTGAAGTGTGCATTCATCTCACAGGTTTGAACGTTTCTTTTGATTGTGTAGTTTTGAAACACTCTTTTCTAGAATCTGCAGGTGGATTTTCTGACTGCTTTGAGGCTTATTGTAGAAAAGGAAATATCTTCATATAAAGACTATACAGAAGCATTCTGATAAACTTCTTTGTGATGTGTGTGTTCATCTCACATTGTTTAACCTTTCTTTTGATTGAGCAGTTTTGAAACACGTTTTTGCAGATTCTGCAAGTGGATATTTGGAGTGCA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_17979:HG3_10X_allpass_3395:HG4_Ill_GATKHCSBGrefine_12178:HG3_Ill_GATKHCSBGrefine_11676:HG2_Ill_GATKHCSBGrefine_11786:HG2_10X_allpass_2760:HG4_10X_allpass_3245:HG3_PB_pbsv_17744:HG3_Ill_manta_3930:HG3_Ill_MetaSV_2449:HG2_PB_pbsv_18054;NumClusterSVs=11;ExactMatchIDs=HG2_PB_pbsv_18054:HG3_Ill_MetaSV_2449:HG3_Ill_manta_3930:HG3_PB_pbsv_17744:HG4_10X_allpass_3245;NumExactMatchSVs=5;ClusterMaxShiftDist=0.286678;ClusterMaxSizeDiff=0.286678;ClusterMaxEditDist=0.293423;PBcalls=3;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-677;DistBack=2456;DistForward=-671;DistMin=-671;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=4163;REFWIDENED=19:24570416-24575255;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1749.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:64:62:0|1:52:9:7:47:0|1:131:1:0:46:0/1:114:31:0/1:111:28:.:.:.
chr19	29950184	HG2_10X_SVrefine210Xhap12_12556	TAAAAAAGAAATTAGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCTGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGATGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAAAAATGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACACCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCAGGAAGCTCCAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGTCAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCTATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAATGGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGATGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTTAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTTGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCAGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCAGTACCAGCCACTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAACTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTAAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATGAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCAATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATAAACTAGCAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAATTCTATTGGAAAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCGCCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGTCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATAAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATTCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCAAAAAAAAAAAAAAGTGTATTTTTATGGAATACATAAAAGGTAACTCTTGTGAGTTATGACTTTGAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_17764:HG2_PB_assemblyticsfalcon_12452:HG2_PB_SVrefine2Falcon1plusDovetail_5647:HG4_PB_assemblyticsfalcon_12303:HG4_PB_SVrefine2Falcon1Dovetail_11231:HG2_PB_assemblyticsPBcR_12075:HG2_10X_allpass_2764:HG3_10X_allpass_3403:HG2_Ill_tnscope_1906:HG3_PB_SVrefine2PBcRDovetail_8820:HG3_PB_SVrefine2Falcon1Dovetail_11211:HG3_Ill_SVrefine2DISCOVARDovetail_12762:HG3_Ill_MetaSV_2456:HG3_Ill_GATKHCSBGrefine_11690:HG2_PB_pbsv_18071:HG2_PB_SVrefine2PBcRplusDovetail_5200:HG2_PB_SVrefine2PB10Xhap12_13169:HG2_Ill_breakscan11_2589:HG2_Ill_SVrefine2DISCOVARplusDovetail_6008:HG2_Ill_MetaSV_2303:HG2_Ill_GATKHCSBGrefine_11800:HG2_10X_SVrefine210Xhap12_12556;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12556:HG2_Ill_GATKHCSBGrefine_11800:HG2_Ill_MetaSV_2303:HG2_Ill_SVrefine2DISCOVARplusDovetail_6008:HG2_Ill_breakscan11_2589:HG2_PB_SVrefine2PB10Xhap12_13169:HG2_PB_SVrefine2PBcRplusDovetail_5200:HG2_PB_pbsv_18071:HG3_Ill_GATKHCSBGrefine_11690:HG3_Ill_MetaSV_2456:HG3_Ill_SVrefine2DISCOVARDovetail_12762:HG3_PB_SVrefine2Falcon1Dovetail_11211:HG3_PB_SVrefine2PBcRDovetail_8820;NumExactMatchSVs=13;ClusterMaxShiftDist=0.00568372;ClusterMaxSizeDiff=0.00568372;ClusterMaxEditDist=0.0105334;PBcalls=11;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-5983;DistBack=18374;DistForward=-5970;DistMin=-5970;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=19:29950185-29956180;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1750.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:57:0|1:35:1:0:29:1|0:0:41:43:0:0/1:38:22:0/1:403:220:6275:.:.
chr19	30289450	HG3_Ill_MetaSV_2458	AGGTGTGAGCCTGTATGAATACATGTGAATATAAACTGATACCAAGAATTAGTGTTCATTTTGGTAGGTGTGTTACTGGTGTGGTTATATAAGAAAACACTCGGCCG	A	20	PASS	ClusterIDs=HG2_PB_HySA_32785:HG3_PB_HySA_27138:HG3_Ill_Spiral_18277:HG3_PB_pbsv_17769:HG3_PB_SVrefine2PBcRDovetail_8824:HG3_Ill_svaba_22372:HG3_Ill_scalpel_17084:HG3_Ill_MetaSV_2458:HG3_Ill_GATKHC_28282:HG3_Ill_GATKHCSBGrefine_11691:HG3_CG_vcfBeta_9620:HG3_10X_allpass_3404:HG2_PB_pbsv_18078:HG2_PB_SVrefine2PB10Xhap12_13174:HG2_Ill_svaba_22162:HG2_Ill_scalpel_16728:HG2_Ill_SpiralSDKrefine_7833:HG2_Ill_SVrefine2DISCOVARplusDovetail_6011:HG2_Ill_MetaSV_2305:HG2_Ill_GATKHC_28385:HG2_Ill_GATKHCSBGrefine_11805:HG2_CG_vcfBeta_10164:HG2_10X_allpass_2766:HG2_10X_SVrefine210Xhap12_12558:HG2_Ill_Krunchall_23990;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12558:HG2_10X_allpass_2766:HG2_CG_vcfBeta_10164:HG2_Ill_GATKHCSBGrefine_11805:HG2_Ill_GATKHC_28385:HG2_Ill_MetaSV_2305:HG2_Ill_SVrefine2DISCOVARplusDovetail_6011:HG2_Ill_SpiralSDKrefine_7833:HG2_Ill_scalpel_16728:HG2_Ill_svaba_22162:HG2_PB_SVrefine2PB10Xhap12_13174:HG2_PB_pbsv_18078:HG3_10X_allpass_3404:HG3_CG_vcfBeta_9620:HG3_Ill_GATKHCSBGrefine_11691:HG3_Ill_GATKHC_28282:HG3_Ill_MetaSV_2458:HG3_Ill_scalpel_17084:HG3_Ill_svaba_22372:HG3_PB_SVrefine2PBcRDovetail_8824:HG3_PB_pbsv_17769;NumExactMatchSVs=21;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0550459;PBcalls=6;Illcalls=14;TenXcalls=3;CGcalls=2;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=2;HG2count=14;HG3count=11;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-106;DistBack=48871;DistForward=19233;DistMin=19233;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=19:30289451-30289558;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1751.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:17:0|1:15:2:1:13:./.:1:10:36:1:0/1:27:19:./.:.:.:.:.:.
chr19	31287231	HG2_10X_SVrefine210Xhap12_12570	CAGTGGCTGGGCGTGGTGGCTCACGCCTGTCATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACCAGGAGTTTGAGACCAGCTTGGACAACATGGTGAAACCCCGTCTCTACTAGAAAAATACAAAAATTAGCTGGGTGTGGTGGTGCACGTCTGTAGTCCCAGCTACTCGGGAGGCTGAAGGGGAGGATCTTTTGAGCCCAGGAGGTAGAGATTGCAGTGAGCCAAGATCGCACCAATGCACTCCAGCCTTGGTGACAATGTGAGACCCTTATCTTTTCTTCTTAAAAAAATAAGAAAGAAAAAGAAGTGGAAGTCAAGAGCACCTCACCTGGCCCTCTGTTCCCTCCTAGCTAGAACAAGTCTGCTTCTACCTTCTTTGTTTCAACAAGAGTTCCTGTGACACACACACTATATATATAATTGTGAAATACATAACATATATATGTGTACACACATCATGTGGTGTATATGTGTGTATGTATAAGCACATGAACACATACAACAAACTCCCACTCATTGTTTTGCTTGCGACCACGTCTGTGCAGCAAACACATTGAGTCTTAGCACTAAAGTTGTGTCAACATACTCAAAGTCACATGTACAGCTGAGCTGAAGGGAGGGTGCTGTCATCTGGCCCAATTTTCAACGTCTGGGTGATGTGGATTTTCATTGCTTTGGATCTTAACGAGGCATTAATTTTTTTCCCTCATTGACATGCATAGTCAGACATAGTTAATCTTTGGGACACTTGCTGGTCAGATGCCTGGGATAAGTATGGATTAAGGGAATTCTGATTACCCAGAGTGCAAGGAAACTTGGGAATTCAGGCAACGAGGGGGTGTTTTTGTAGGTGGCAGAGCTGCCCGTGGCAGAGCAAGTTGTATCCAGAAAGGATTTTGATCAATGAAAGTTTCTGTGTTGGCAGCATGTGGGGTTTACTGGGAAGATGGGCCCCCTGTGTTCATGTTTGCTTTTCAAACCTGTCTCTATATAGGGGTGGAATCTGAACTCAGCCTTCCTGGGACTCTACCTTCGGCTCTGGTTTTATGGCCAGGTGCCACATCTATGGAGCAATGCTGCTGCCTCCCCATATGAAAATCCTTAATCTACTGAAAAACCCAGTCCTGGACTAGCCTGGATAGAGAGGCAGTTCTATAAATCACTATTTATCACAAACTTTATTGTTAGTGTTCCACAGTGGAATGTAAACTCCATGAAGGTATGTCTTAAAATTATTTGCAAATGAATGGCTCCTCATTGAGAAGGTTAGCTCTAGACCTCAGCCAGGATGTGTGCCTGTCACCAAGTCCTTCCTGCACTCACAGTGCCCTCCACGTTGTGCCAGGCCCTAGGTGGTCTGAGTGGAACTTGACCAAAAGGAATCTTTCCTCCAGTCTGGCCTCAGACAATTCACCCCCACTGTGTGGGGTAGGATGGATGCTCTTAGGTTTTCTGCCATGATCTGATGTCTTAGTAGAGCTGTATGCTCCTGGATTTCAGTCTTGCCTTTCCCAGAGACATTCTCTGCTGTCATAAAAGATCCTTCCTTTCTCTCACACACAGCATCAGTGATGCTACTTCTACTTGAGGGAGGTGTGGTGTCCTCTAACTTCAATTCTAAAGTCAGCCTGTTGGGCTTGGTTAAAAAGGTGCTTTAGCCCTTCTTGGGGAGAATGGAGACTCTCATTGGAGATCCTTGTGTTGGAGGAGGATGTGAAAGTGGATTTTAAAGTTAAATATATGTATTACTTTGTAATCTAGCAAATTGACTTCTTGGCATATCTTCCTTGTACTTTCTTGGATACGTGAAGGCAGATACAAGAATATTTATTGCAACATTTTTGTAATAGTGAAAAATTGAAAACAATTTACATGTCCATTAATATAGGAACAAATAAAACTGAATGCAGCCATACTAAAGAATCTTATGCAGCAATTAGAAAGCATGAGATAAATCTATATGTATTAATATGGATACGACTTCAATGGATATGGCAAGTGAAAAAAAAGCATGCTATGGATAGCTACACTGGTTTCATGAAGTTTATGTTAAGAGAAATAAAGAATAAATAAATGATTTTGTATTTTCTATAAGAATATATATTTTCATATATTTGTAAATGATTACAAAAGGCCTAAGAGTCTACACCCCAAGTGGATTCCAGTAGACACTTTTTAGGAAGGAGAAATAGATTTGCAGAGGTGGACAACAGGTATAGACTCTGTTGTTTCATACATACATATATATATATATATATATATATAGTA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12570:HG4_10X_allpass_3256:HG2_10X_allpass_2769:HG4_PB_pbsv_18016:HG3_PB_assemblyticsfalcon_12515:HG2_PB_pbsv_18088:HG2_Ill_MetaSV_2309:HG4_Ill_MetaSV_2381:HG4_Ill_GATKHCSBGrefine_12204:HG3_PB_SVrefine2Falcon1Dovetail_11224:HG4_PB_SVrefine2PBcRDovetail_9075:HG4_PB_SVrefine2Falcon1Dovetail_11246:HG4_Ill_SVrefine2DISCOVARDovetail_12557:HG2_PB_SVrefine2PB10Xhap12_13184:HG2_PB_SVrefine2Falcon1plusDovetail_5657:HG2_Ill_SVrefine2DISCOVARplusDovetail_6021;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12570:HG4_PB_SVrefine2PBcRDovetail_9075:HG4_PB_SVrefine2Falcon1Dovetail_11246:HG4_Ill_SVrefine2DISCOVARDovetail_12557:HG2_PB_SVrefine2PB10Xhap12_13184:HG2_PB_SVrefine2Falcon1plusDovetail_5657:HG2_Ill_SVrefine2DISCOVARplusDovetail_6021;NumExactMatchSVs=7;ClusterMaxShiftDist=0.122131;ClusterMaxSizeDiff=0.122131;ClusterMaxEditDist=0.122131;PBcalls=8;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2273;DistBack=63309;DistForward=-2026;DistMin=-2026;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=274;REFWIDENED=19:31287232-31289778;PctSeqSimilarity=0.9545;PctSizeSimilarity=1;PctRecOverlap=0.894;SizeDiff=0;StartDistance=-241;EndDistance=-241;GTMatch=0;TruScore=94;MatchId=1752.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:34:31:./.:12:21:16:3:./.:65:0:14:2:0/0:68:1:0/1:184:64:2231:.:.
chr19	31495618	HG2_Ill_SVrefine2DISCOVARplusDovetail_6023	TCCTTCCTTCCTTCCTGCCTTCCTTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCCTGCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCATTCTGGTTAGCCTCCCTCTCTTA	GGTTAGCCTCCC	20	PASS	ClusterIDs=HG3_PB_pbsv_17776:HG2_PB_pbsv_18089:HG3_Ill_SVrefine2DISCOVARDovetail_12773:HG2_PB_assemblyticsfalcon_12474:HG2_PB_SVrefine2Falcon1plusDovetail_5658:HG2_PB_SVrefine2Falcon2Bionano_8881:HG2_Ill_SVrefine2DISCOVARplusDovetail_6023:HG2_10X_SVrefine210Xhap12_12571;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6023:HG2_PB_SVrefine2Falcon2Bionano_8881:HG3_Ill_SVrefine2DISCOVARDovetail_12773;NumExactMatchSVs=3;ClusterMaxShiftDist=0.177215;ClusterMaxSizeDiff=0.177215;ClusterMaxEditDist=0.242915;PBcalls=5;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-127;DistBack=-17;DistForward=-130;DistMin=-130;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=151;REFWIDENED=19:31495467-31495737;PctSeqSimilarity=0.9372;PctSizeSimilarity=0.9449;PctRecOverlap=0.1223;SizeDiff=7;StartDistance=104;EndDistance=122;GTMatch=0;TruScore=66;MatchId=1753.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:0|1:31:2:5:24:./.:9:23:32:3:0/1:15:13:./.:.:.:.:.:.
chr19	33572781	HG2_Ill_SVrefine2DISCOVARplusDovetail_6032	TATATATATGATTTTTAGAGACAGGGTTTTGCTCTGTTTCCCAGGCTGGTCTTGAACTCCTGACTTCAAGTGATCCTCTCGCTTCTGCCTCCCAAAGTGCAGGGATTACAGGCTTGAGCCACTGTGCTCGGCCAATTTTTAATGTTATTCTATCTTTGATGTTGAGAATACACTGGTTGGGGATGGGTAAGAGTGAAGCAGGGAGATTAGCAAAAAGAGGTCAGGAGATGATGGTGGCATGGATGGGACAGCAGTGGTGGTGGT	ATTACACA	20	PASS	ClusterIDs=HG2_PB_HySA_32839:HG2_PB_pbsv_18096:HG4_PB_HySA_26243:HG4_Ill_Spiral_1389:HG2_Ill_Spiral_1167:HG2_Ill_SpiralSDKrefine_7849:HG2_PB_SVrefine2PB10Xhap12_13192:HG2_PB_PB10Xdip_15154:HG4_PB_assemblyticsfalcon_12335:HG4_PB_SVrefine2Falcon1Dovetail_11252:HG3_PB_SVrefine2Falcon1Dovetail_11228:HG2_PB_assemblyticsfalcon_12489:HG2_PB_assemblyticsPBcR_12109:HG2_PB_SVrefine2PBcRplusDovetail_5216:HG2_PB_SVrefine2Falcon2Bionano_8885:HG2_PB_SVrefine2Falcon1plusDovetail_5664:HG2_Ill_manta_4809:HG2_Ill_SVrefine2DISCOVARplusDovetail_6032:HG2_10X_SVrefine210Xhap12_12582:HG4_10X_allpass_3257:HG2_10X_allpass_2771:HG4_Ill_Krunchall_24382:HG2_Ill_Krunchall_24014:HG3_PB_assemblyticsfalcon_12528:HG4_PB_pbsv_18023;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12582:HG2_Ill_SVrefine2DISCOVARplusDovetail_6032:HG2_Ill_manta_4809:HG2_PB_SVrefine2Falcon1plusDovetail_5664:HG2_PB_SVrefine2Falcon2Bionano_8885:HG2_PB_SVrefine2PBcRplusDovetail_5216:HG2_PB_assemblyticsPBcR_12109:HG2_PB_assemblyticsfalcon_12489:HG3_PB_SVrefine2Falcon1Dovetail_11228:HG4_PB_SVrefine2Falcon1Dovetail_11252:HG4_PB_assemblyticsfalcon_12335;NumExactMatchSVs=11;ClusterMaxShiftDist=0.115768;ClusterMaxSizeDiff=0.115768;ClusterMaxEditDist=0.115768;PBcalls=15;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-256;DistBack=-104;DistForward=-155;DistMin=-155;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=19:33572781-33573044;PctSeqSimilarity=0.9866;PctSizeSimilarity=1;PctRecOverlap=0.9735;SizeDiff=0;StartDistance=-7;EndDistance=0;GTMatch=0;TruScore=98;MatchId=1754.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:38:0|1:32:1:0:34:0|1:50:0:0:12:0/1:32:18:./.:.:.:.:.:.
chr19	34316368	HG2_PB_SVrefine2PB10Xhap12_13199	TATATATATATATATGCATGGTATATATATAAATATATATATATATATATGCATGGTATATATATATATGCATGGTATATATATAAATATATATATATATATGCATGGTATATATATATATGCATGGTATATATATATATATATATATATATATATATCATGCATATATATACACATACATACACATACACCATATATATGAGTAATGTCT	CCA	20	PASS	ClusterIDs=HG4_10X_allpass_3259:HG2_PB_assemblyticsPBcR_12120:HG2_PB_SVrefine2PBcRplusDovetail_5222:HG2_Ill_SpiralSDKrefine_7857:HG4_PB_SVrefine2PBcRDovetail_9083:HG4_Ill_SVrefine2DISCOVARDovetail_12573:HG2_PB_SVrefine2PB10Xhap12_13199:HG2_Ill_SVrefine2DISCOVARplusDovetail_6040:HG2_10X_SVrefine210Xhap12_12587:HG4_Ill_MetaSV_2385:HG2_Ill_MetaSV_2313:HG2_Ill_Krunchall_24029:HG4_Ill_scalpel_16398:HG4_Ill_GATKHCSBGrefine_12214:HG2_Ill_GATKHCSBGrefine_11827:HG4_PB_pbsv_18028:HG2_PB_pbsv_18103:HG4_Ill_Krunchall_24391:HG2_PB_HySA_32853:HG4_PB_HySA_26257;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12587:HG2_Ill_SVrefine2DISCOVARplusDovetail_6040:HG2_PB_SVrefine2PB10Xhap12_13199:HG4_Ill_SVrefine2DISCOVARDovetail_12573:HG4_PB_SVrefine2PBcRDovetail_9083;NumExactMatchSVs=5;ClusterMaxShiftDist=0.247706;ClusterMaxSizeDiff=0.247706;ClusterMaxEditDist=0.247706;PBcalls=8;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-208;DistBack=0;DistForward=-207;DistMin=-207;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=19:34316368-34316578;PctSeqSimilarity=0.9976;PctSizeSimilarity=0.9952;PctRecOverlap=0.9953;SizeDiff=-1;StartDistance=-1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=1755.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:./.:23:4:8:22:0|1:13:1:0:28:0/1:14:16:./.:.:.:.:.:.
chr19	35661075	HG2_PB_SVrefine2PBcRplusDovetail_5229	GGAGGTCGAGACTGTAGTGAGCTGTGATTGCACCACTATATTCCTGCCTGGGTGACAGAGTGAGATCCTGTTTCTAAAAAAGAAAAATATAACAAGCCAAGGCAGGGAATAAAGTTAGGGAAGCCAGTCTAGTGTGTGGCAGACAGGATGGCGGTGGGCGGTTGCAGGTGAGTCTGTGTGCTGGGTGACTGGCCAGAGAGAGAGTCAGGGCTGGCTTCTGCCTGCAGTCAGTTTGAGAACACTGGCGTGGTCCCCATAAGGGAGCAGGTACCCAGTGTCAGCTCACCCCTAACATTTTTAAGGGTTTGGAGGTCCCAGATCACAGGGATCCCCTCTCCTTCCTACTTCTAGTCCCTTCCCACACCGGGAGGGGCCTTGCACACATGAGTGTGGATGCCACAGCCTGCACCTCCAAGCTCTATCCACAGCCCCCAATACACAAATGGCCACCCTCCAGGGCACTTCTTGGCTTAGGAATGTGTCCACCAAGAAGGCCCTGCAGGCCCCAGCATGGGCGCAGAGCAATTTGGGAGAGGAATTCAGGGGTCCTAGGGATCTAGAACATGGTCGAGAAGAGCATAGGTGCTGGTGGGCACTTCCTGAAGGCCCTTGGGCTCGACCAGATTAGGCCAGAGCAGGTCCCCTGAAGTGCAGGACTTAGACCAGAGCTCTACTCAGGCTTAAGGGTCGTGCCAAAATCAAGAGACAAGGTCCCGGTCACAGGGCTTACATAACAGTGTTTCACAACTTCAGGTCATAGCCCATTCATGGGTTACTAAATCAGTTTAGTGGGCTCTGAGTAGCATAAGAAAAAAGAGAGAAAGAAAGAATAATTTTTAAAAGACATTAGTATATCACTAATAAATGTAAGATTGTATATATATAATATACATAGCATGTCATATACATCATATGCAATATAATTATATATAATGTATAGAATATGACAATTATAACATATATAATTGTTATTAATGCATCACTATAAATGTTATTACTGCATCACTAATCTCAAATATAAGACTGTATATATAATATGTAGCATGTTATATACATTATATATGTATGCATATCTTCATTATAATATGTATATTATACACATACAGGGGGATACTAAAATTATTTCATTATTTGCACCTACCACATAAAGCAGAACAGATGTCTAACTGATCAGGAGGGGATGTCATCTAGATATGAGTATACATTTACATATACAATGGATTATGTCTTTTTTTTTCTCTTTTTTTTTTTTAGATGGACTCTTGCTCTGTCACCCAAGCTGGACTGCAGTGGAGTGATCTCAGCTCACTGCAACCTCTGCTTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGCAGCTGAGATCACAGGCGCCCGCCACCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTCGGCCAGGCTTGTCTCGAACTCCTGACTTCAGGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGCCCAGCCTGATTATATATATTAAGTTGAATAATTTGAAAATGTCAATATTCAAATGTGTTTGACCTATAAAACTAGCAATGTCATATGGCTCAACCTAACAGTATACATGATAGTGTGATATGAAATGCATTTCATACTGCAGGTTGCTTTTTGAAAACGTTGAGAAGCACTGGGCAGTGGGGGACATAGGTTGTGGCAGGGAAGATAAATTTCCGGTTAGAACAGGAAATGCTGGCAGCTATTTTTGCCTGCTGGCTGGGTGGTGGCCACACCAGTGTGTGCAAGATGTTTCTAGTACGATAGTTCTCAAACTTCAATCATCACATATTCCCAACTTATGACATATTTTCACCCCATCTGTACTATTATTCTCTCTTTTAAAAGATCAACTCCCTTTTTAGTTTAAACATATTTATTTTAAAAGCCACAATCATGTATGGAAAATCAGTACTGCTTGATATAGATAGAAGATAGCTATAAAGATAAATCCAAGGCCAGGCGCAGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGGAGACCGAGGTGGGTAGATTATTTGGGGTCAGGAGTAAGAGACCAGCCTGGCCAAGATGGTGAAACCCTGTCTCTACTATATAAAAATACAAAAATTAGCTGGGCGTGGTATCGCACGCCTGTAGTCCCAGCTACCCAGGAAGCTGAAGCACAAAAATTGCTCGAACTCAGGAGGCAGAGGCTGCCGTTAGCTGAGATCGTGTCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCTGTCAAATAAATAAATAAATCCAGTGAAAAGAAATGAAGATGTTATGTTGCATTCTAGCTGGGTCTGGAGTTTCTTGCAGAGGGCTGTGAACCAGAGGCCTGGGTCTGTGGTGTTGGAGGGAGACCCTCAAATATCAGGGAGGTGATCTTCACGCTGCTGCCCAAAGAAACTGCAGGGTTTGGGAGTTTCTTTGGAACTCTCAGCTCTGACTGTGAGTCTCACTTCTGACACCAGCTGCGGGTTTGAGGGTTCCCGAGGGTTTGACAATTCACTACAAGGACTCACGGAACTCACCGAATGCTCTCAGACTCACAGTTAGGGTTTATTATAGTGAAAGGAAACAGATGAAAGCCAGCCGAGGACAGAGACACATGCGGAAGCATCCAGGAATGTCCCAAGTGCAAAGCTTCCAGCTGTCTCCTCCCAGCGCTGTCTTCTGCGGGCACCCATGTGGGACAGTACACGCAGAGTGTTGCCAATCAGGGAAACCCACTCGAGCCTTGGCGTCCAGAGTTTTTACTGGGGCTCAGTCACATAGACGTAATTGACCACACGTGTGGCCGACATTAGTTTCCAGCCCCTCCAGGGGTGGAGCTGATACTGTGTGGCCCACATTCCTCAATGGAAATCACACTGTTAGAAATGATCTGGTGTGGCCCTAGGTCCCTATGTAAATAGAGACACTCTTATCAGGCAGAACATTCCAAGGGCTTAGAGATTACCTTCCAACAGCAAGGCCAGAAGTCAGCCCTTTGGGGTAAAATTAATTCCTTACTATAGAGACTTTCTCCCTCATCTCATTTGATGGATTAAGAGATATTCAAGGCCGGGCGCTGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATGACCTGAGGTCAGAAGTTCGAGACCAGCATGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATAGCCAAGCATGGTGGTGCATGCTGTAGTCCAGCTACTCAGGAGGCTGAGGCAGGATAATCGCTTGAACCCAAGAGGTGGAGCTTTCAGTGAGCCGAGATCACACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAACAAACAAACAAAACATAAGAGATATTCAAAGGTGATTTACTTTCTGACCATGTGACTCAACATGATTTTACCTTGTTTGGGGCCTAAAGCCATGTTGTGTGCTACCACGTCAGTTCAGGAGAATACCTGACAGCTTCCTTGCGCAGAATAGAGGCGGTACTAACTCAAGGGGGGATGAGTGGGGTTGGCCCTCGGTGTTCTCTCGCCACTCATTCTATCTTCCATGGGGTCGGGATGAAAACGCCAATACTATGTTTCCCAGATGCGCTCAAAGATGTGGTTTTGGGTGTGGATTCAGCTCTGCGAATTAGAGGCCCTCGCAGAAGACTTGGAAGACCAAAAGAGACCATCTTTCTGTGCCATTTGCTGTTTGCTGTGAGCTCATAGGATGGTGAAAGTGTTGAGTTTTTTTGGCTGTACCATTCCAGTGTCCAGTCACTAGCCTCGTAGGTACTAAAAGGCAGTTATGCTCATAAAAGAATATCTAAATTGGCCAGGCGTGGTGGCTTATGCTTGTATTCTCAGTACTTTGGCAGGCCAAGGCAGGCGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCAGGCCAACATGGCAAAACTCTATCTCTGCTAAAATACAAAAATTAGCCAGGCGTGGTGTAGTCCCAGCTGCTCAGGAGGCTGAGGCAGGAGAATCGCTTGAGCCTGGGAGGCGGAGGTTTCAGTGAGCAGAGATTGCGCCATTGTACTCCAGCCTGGGCAACAGAGAGAGACTCCATTTTGAAAGAAAGAAAGAGAGAGAGAGAAAGAGAGAAAGAAGAAAGGAAGGAAGGAAGGAAGGAACGAAGGAAGGAACGAAGGAAGGAAGGAAGGGAAAGGGAAATCTAAATGGCCAATAAGCACATGAAAAGATGTTCAATATCAACAGTCATCAGTAAAAATAAATGAAAATCACAATGAGATACCACCACACACCCACTAGGATGGCTAAAATTAAAAAGACAGACACTTCCAAGTGGGAAGAGGATGTGGAACAAGTGGAATTTCCATTCGTAGCTGGACCAGAAAGGGATACAATCACTTTAGAAAACTGGCAGTTTCTAGGCTGGCCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAAGACCATCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAGCCCCGTCTCTACTAAAAATACAAAAATTAGCTGGATGTGGTGGTGGGTGCTTGTAATCCCAGCTACCCGGGGGGCTGAGGCAGGAAAATCACTTGAACCCAGGAGACAGAGGTTGCAGTGAGCC	G	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11262:HG2_PB_assemblyticsPBcR_12136:HG3_10X_allpass_3410:HG3_PB_pbsv_17795:HG2_10X_allpass_2773:HG2_PB_pbsv_18111:HG2_Ill_tnscope_1909:HG3_Ill_MetaSV_2465:HG2_Ill_SpiralSDKrefine_7864:HG2_Ill_MetaSV_2314:HG3_PB_SVrefine2PBcRDovetail_8842:HG3_PB_SVrefine2Falcon1Dovetail_11236:HG3_Ill_SVrefine2DISCOVARDovetail_12796:HG2_PB_SVrefine2PBcRplusDovetail_5229:HG2_PB_SVrefine2PB10Xhap12_13206:HG2_PB_SVrefine2Falcon2Bionano_8898:HG2_PB_SVrefine2Falcon1plusDovetail_5677:HG2_10X_SVrefine210Xhap12_12594;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12594:HG2_PB_SVrefine2Falcon1plusDovetail_5677:HG2_PB_SVrefine2Falcon2Bionano_8898:HG2_PB_SVrefine2PB10Xhap12_13206:HG2_PB_SVrefine2PBcRplusDovetail_5229:HG3_Ill_SVrefine2DISCOVARDovetail_12796:HG3_PB_SVrefine2Falcon1Dovetail_11236:HG3_PB_SVrefine2PBcRDovetail_8842;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00466547;ClusterMaxSizeDiff=0.00466547;ClusterMaxEditDist=0.00466547;PBcalls=10;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-4718;DistBack=567;DistForward=-4714;DistMin=-4714;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=19:35661076-35665803;PctSeqSimilarity=0.9907;PctSizeSimilarity=1;PctRecOverlap=0.9992;SizeDiff=0;StartDistance=-4;EndDistance=-4;GTMatch=0;TruScore=99;MatchId=1756.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:62:1|0:3:32:45:0:0|1:51:0:1:26:0/1:37:9:0/1:325:177:4405:.:.
chr19	36662674	HG4_Ill_GATKHCSBGrefine_12221	GGTCCCAGCTACTGGGAAAGGCTGAGGTGAGGGAATCACTTGGGCCTGAGAGGCAGAGGTTGCAGTGAGCCAGGATTGCACCACTGCACTCCACCCTGGGTGACAGAATGTGACCCTGTCTCAAAAATAAAAAATAAGGCCGGGTGCGGTGGCTCACGCCTGTACTCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAAGAGATCGAGACCATCCTGGCTAATGCGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGCGGGTGCCTGTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12604:HG4_Ill_Krunchall_24409:HG4_PB_pbsv_18040:HG3_PB_pbsv_17802:HG2_PB_HySA_32875:HG4_PB_HySA_26278:HG4_Ill_scalpel_16413:HG4_Ill_GATKHCSBGrefine_12221:HG3_PB_HySA_27198:HG3_Ill_scalpel_17133:HG3_Ill_MetaSV_2469:HG3_Ill_GATKHCSBGrefine_11714:HG3_10X_allpass_3411:HG2_PB_pbsv_18118:HG2_Ill_manta_4813:HG2_Ill_GATKHCSBGrefine_11833:HG4_Ill_MetaSV_2392:HG2_Ill_MetaSV_2316:HG2_Ill_tnscope_1910:HG2_PB_SVrefine2Falcon2Bionano_8903:HG3_Ill_Krunchall_23633:HG4_PB_SVrefine2PBcRDovetail_9091:HG4_PB_SVrefine2Falcon1Dovetail_11266:HG4_Ill_SVrefine2DISCOVARDovetail_12588:HG3_PB_SVrefine2PBcRDovetail_8847:HG3_PB_SVrefine2Falcon1Dovetail_11240:HG3_Ill_SVrefine2DISCOVARDovetail_12801:HG2_10X_SVrefine210Xhap12_12605:HG2_PB_SVrefine2PBcRplusDovetail_5235:HG2_PB_SVrefine2PB10Xhap12_13212:HG2_PB_SVrefine2Falcon1plusDovetail_5682;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11833:HG2_Ill_manta_4813:HG2_PB_pbsv_18118:HG3_10X_allpass_3411:HG3_Ill_GATKHCSBGrefine_11714:HG3_Ill_MetaSV_2469:HG3_Ill_scalpel_17133:HG3_PB_HySA_27198:HG4_Ill_GATKHCSBGrefine_12221:HG4_Ill_scalpel_16413;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0232945;ClusterMaxSizeDiff=0.0232945;ClusterMaxEditDist=0.153078;PBcalls=14;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-297;DistBack=-297;DistForward=4934;DistMin=-297;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=148;REFWIDENED=19:36662632-36663076;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1757.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:36:1/1:2:12:1:13:1/1:0:19:0:30:1/1:1:57:./.:.:.:.:.:.
chr19	36840751	HG2_PB_pbsv_18121	AATAAAAAAGAACAATAGATAGGCTGGGCGTGGTGGCTCACACCTGTAATCCCAACACTTTAGGAGGCCAAGGCGGGCAGACTGCTTTGAACTCAAACTCCACAAGTTTGAGACCAGCATGGCCAGCATGGTGAAACCCTGTCTCTACTAAAAATACACACACAAAAAAGTAGCTGGGTGTGGTGGTGCTTGAGCCCGGGAAGTGGAGTCTGCAGTGAGCTGAGATTGTGCCACTGCACCCCAGCCTGGAAAACAGAGCCACACTCTGTCTCAAAAAAACAAAACAAACAAAAAAAAAAAACAGAAAAGAACATAAAAGATACATGGGACAATGTTAAAGTGTCTAACATATGTGTAACTCACACAGAGAAAAGAACAAAAATGAGAAACAAACACTATCTGAAGATATAGTAACCAGAATTTTCCCAAACTGACAAAAGACATCAAACCCAAGATTTAAAAAAATTCCTAGCTGAGCCTAGTGACTCAGGCCTGTAATCTCAACAATTTGGGAAGCCAAGGAGGGAAAACTACTTGAGGCTAGGAGTTCAAGACCATCCTGGGCAACATAGGGAGACCCCCATCTCTAAAAAAATACAAAAGTTCACTGGGTGTGGTGGTGTGCACCTGTGGTCCAAGCTACTTGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGGGTGAGGCTGCCGTGAGCTGAAATCATGCCACTGCACTCCAACCTGGGCATCCAAGCAAGATCCTGTCTTTAAAAAACCAAAAAAAAACAAAAAACAGCTTCCTAAATACTTCAAGCAGATGACAACACAATATCCACCACACTACAAAACTACACCACAATATAATTGGGATTTTTACATTTCACTGCAATATAAAATTAGGCACACCACAGTAATCTGTTAAAAAAAAATCCAAAAGCAGCTAACGGGAAAAAATACCTCTAAAACAATATCTCTGAAGGAGTTACAATATAAGTGACAAACTACTACTCAATGGAAATAATGAAAGCCAGAAGACAAGGAGGGGATATTTGCTAAGAGAAAATAACTGCCAACTCAGAATTCTATTCTCCACAAAAATAAAGACAAAATTTTGTACCCTTTAAAAATTAAGACGTAATAAAGATATTTTCTAATAAAACCTAAGATAATTTATTGCCAGTGGACACAATAAAATAAATACTAAGTAAGTTCTTTGGGTACACAGAAAATGGTTCCAGATAAAAGCAATGCAATGCAGAAAATAATAAGGAGCACTGTAAAAGGTAAATGTGTGGGCAAATGTAAAAAAAATTCACTACTTATTACAATAAGAAATTAATGCCCTGTGGGGATTAAAATGTGGAATTAAGATACATGACAACAGAGCTGGGTACAGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACCTGGGATCAGGAGTTCAAGACCAGCCTGGCCAACATGGCGAAACCCCGTCTCTACTAAAAACTACAAAAATTAGCCGGCATGGTGGTGCATGCCTGTAGTCCCAGCTACTCTAGAGGCCGAGGTGGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAGGATCCCACCACTGCACTCCAGCCTAGGCAACAGAGCAAGACTGCATATCACAAAAAGAAAAAAAAAGGCATATGACAACAAATGCACAAAAAACTGAGGACACATAAAAGGAATTAAAATACTATTAAGGGTTGCGTACAGTGGCTTACGCCTGTAATCACAGTACTTTGGGAGGCTGAGACAGGAGGATCATCTGAGACCAAGAGTTTGAGACCAGCCTGGCCAACACAGTGAGACCCCCATCTCTAAAATAAAACAAATTAGCCGGGCATGGTGGTGTGTACCCGTAGTCCTACCTACCCAAGAGGCTGAAGTAGGAGAATTGCTTGAGCCCAGGAGTTTGAGGTTGCAGTGAGCTATGATCACACCACTGCACTCCAGCCTGGGTGATGCAGTGAGACCTTGTCTCTAAAAATAAATGAATACATTTTTTAAAGATTCTATTAAGATCCGGCCGGGTGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACAAGGTCAGGATATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCGGGGCGTGGTGGTGAGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACGGCGTGAACTCGGGAGGCAGAGCTTGCAGCGAGCCGAGATCGTGCCACTGCACTCCATTCTGGGCAACGGAGCCAGACTCTGTCTCAAAAAAAAAAAAATTCTATTAAGATCCCTACAATTTTGAACAAGATATAAAGAAGCTAATTTCAGATTCAATGCAATAAGTAAATAATGTACTTGTTATTGTCTAAGGCAACCACAAGAAGAAAAATAAATGTATGTATAATGATCATGTTATAAAAGGAAAAACTAGAATAAAAATGCTTGATTAATCCAAAAAAGGCAGGAGAATGAAAAAAGTAAGAACATATTAAGCAAACAGAAAAACACTGGGAAGACAGCAGATTTAAACCCAAATATGTAAGAAAATTAATGAAATGTAGATGCATAAAATACATCAATTAATAGACAAAAATGACTGGGCACAGTGGCTCACACCTGTAATACCAGCACTTCGGGAGGCCAAGGTGGGAGAATCCCTTGAGGCCAGGAGTTTTAGAGCAACCTGGCAACACAGTGAGACACTGTCTCTACAAAAAATGCTTAAAAATTAGCCATGTGGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAACACTTTGGGAGGCCGAGGCGGGCGGATCACAAGGCCAGGAGATCGAGACCATCATGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATATAAAAAATTAGCCGGGCGTGGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGAAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCCGGGCGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAAAAATTAGCCATGTGTGGTGGTGCGCACCTGTAGTCCCAACTACTCAGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAAGTTGAGCCATGTTCATGTCACTGCCCTCCAGCCTGAGGCAACAGAGCAAGACCCTATCTCGAAGAAAAAAAAAAGATCTTCCTTACCCACACTGGGGATGGGATGCTGTTTCCATTACTGGAGGCAGCCTAGTGCAGGCTGTTGCAGTACAAGCACAGTAAGGGAAGTATTCAGAGAAGAGCAGCCCAGCATGTACCAGGCAAACCTATCAGGAATCTAACATTTTCTCTCAGCCTTCCACTAGTACCATTCTCAGCAAAACCACTATCATCTTCAATGTGGACAAATGAAATAGCCTCCTAGTGGGTCTTCAAACTATCCATCATGCCCTTATTCAATCTATTCTCTGTAGAGTGGTAATTATTTAAAAATCAGCTCATGTAGGCCGGGTGTGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACAAGGTCAGGCGTTCGAGACCAGCCTGACCAACACACTGAAACCCCATGTCTACTAAAAATACAAAAATTAGCTGAGCGTGGTAGCGTGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGACAATCGCTTGAACCAGGAGGCGGAGGTTGCAGTGAGCCGAGATTGCGCCACTACACTCCAGTCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAATCAGCTCATGTTACTCCCCTGCTCAAAAATCTCCAGCAGCTTTCTACTACACTTAAAATAAAAAAAAGTCAGATGCAGCTGAGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACTGAGGTGGGAGGATCGCTTGAGCCTAGGAGTTCAAGACCAGCCTGGGCAACATAGCAAAACTCCCGTCTCTACAAAAAATACAAAAATTTTCCAGCGGTGGTGGCATGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGACGATCACTTGAACCCAGGAGTTCAAGGCTGCAGTGAGTCATGATCACACCACTGCACTCCAGCCTGGGCAACAGAACAAGACCCTGTCTCAAAAAAAAAAAAAAAAAGCCGGGCACAGTGGCTCATATCTGTAATCCCAACACTTTGGGAGGCCGAGGCAGGTAGATTACAAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCTTGTCTCTACTAAAAATACAAAAATTAGCCAAGCACGGTGGTGGGCACCTGTAATCCCAGCTACTTAGGAGGCTGAGACAGGAGTATCGCCTGAACCTGGGAGGTGGAGATTGCAGTGAGCTGAGATGGTGCAACTGCACTCCAGGCTGGGCGACAGAGAGAGATTCCATCTCAAAAAAAAAAAAAAAAAGTCAAATGCCTTCTCCTATGATATACAAACCATTACATGATCTCGCTCTTGCCTAACATTATCTTGTTTCTACACCTTTCACTTACCTTTTGAATAAGCATCTTAATCATCTTGGGCTTCTTGCAGTTCCTCAAAAATACAAAGCTCCCCTCAGCCCACCCAAAGCCTTTGTATTTGCTGTTCTCTGCCAGGAATGCCGTTGCTTTAGATATTCATATGGCCTGGGCTCTTTTTTCATGTCACTATTCAAGTATCACCTCCTCAAAATGTCCTGACCACCCTATTTAAAACATCCCTATCTCTACTTGCCAACTTCCATTCTCACCCAGGCTGGAATGCAGCAGCGCGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATACTTCTGCCTTAGCCTCCTGAGTAGCTGGGACTACAGGCATGTGCCACCACGCCCAGCTAATTTTCGTATTTTCAGTAGAGACAGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGCCTCAAGTGATCCTCCCACCTCAGCCTCTCAAAGTGCTGGGATTACAGGCACGAAGCCACTGCGCCTGGCCCTTCTTACTTTTCTTAATACTTGTCCCTACCTAATATTATGTATTGATGTACTTGTTTACTTCATGTCCTTACTCCTATTAAGATGTAAGCAACATGATTGCTGGGACCCATGATTCTCATTCACATCTGCTCCACTGGTGTCCAGCACAACACCTAGTTCCAACTAGGCACTCAAGTATTTGCCAAATAAATAAAGGAATATATTTCTAGCCAATGAAAGACATATCAACCTAATCATAATAGAAGCTAGAAAGAAACTGGGTCCTAAATATGGACTGAACTCTGTTCCCCTAAAATTTGAATGTTGAGCCCTAACTAACTGTATGTGGAGATGGGGCTTTTAGGAGGTAATTAAGGTTAAAGGAGGCCTAGAGGAGGGGTCCTAATCCACTAGAATTACTGGCCTTGTAAGAAGAAGAAGAGGGCCAGGTGCAGTGGCTCGCGCCTGTAATCCCAGCACCTTGGGAGGCAGAGGTATGAGGATCACTTGAGCCCAGGAGTTCAAGAACAGCCTAGGGAATACAGGGAGATCTCTGTCTCTATAAATTTTTTTTTTTTTAAATAGCTAAGTGTGGAGGCATGTGCCAGTAAACCCAGCTACTCAGGAGGCTGAGACGGGAGGATTGCTTGGGCCCAGGAGTTCAAGACTGCAGTGAGCTGTGATGGCACCATTGCACTCCAGCCTGGGCAACACAGTGAAGCCCTGTCTCAAAAAAAAAAAGAAGAAAAAAAAAGGAAGAGAGTGACCTCTTTCTCTCTCTGTGTCATATGAGGACACAACAAGAAGGCAGCTGCCTGCAAGCCAGGAAGAGAGACTTCACCAGAACCTGGCACCCTGATTTTGGACTTCCAGCATCTAGAATTGTGAGAAAATACATATCTGGTGTTTAAGCCACCCAGACTATGGTATTCTGTTACAGCAGCTTAAGATGATACAGATTTAAATAGAGATGAAACTGTAGTCACCGATCAAAAAAAAGAGTAGCCCCTCTCTTTGTCAAATCTTTTCCCCATTCCCCTCAACAGCATCCTTAAAATTTTTTTTATTTTAAAATAATTATAGATCCATGGGAAGTTGCACAAAATGTACAGAAAAGTCCTGTGTAGACTTCACCCAGCCCCTCCCAGTGTTAACATCTTAGGTAAGTATAGCACAATATTCAAAACAAGAAATTAATGGGGCTGGGCGCAGTAGCTC	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1911:HG2_PB_SVrefine2Falcon1plusDovetail_5685:HG2_PB_assemblyticsPBcR_12150:HG2_10X_allpass_2774:HG2_PB_assemblyticsfalcon_12530:HG3_PB_pbsv_17805:HG3_PB_SVrefine2PBcRDovetail_8851:HG3_Ill_MetaSV_2471:HG2_PB_pbsv_18121:HG2_PB_SVrefine2PB10Xhap12_13217:HG2_PB_SVrefine2Falcon2Bionano_8906:HG2_Ill_SpiralSDKrefine_7870:HG2_Ill_MetaSV_2318;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_MetaSV_2318:HG2_Ill_SpiralSDKrefine_7870:HG2_PB_SVrefine2Falcon2Bionano_8906:HG2_PB_SVrefine2PB10Xhap12_13217:HG2_PB_pbsv_18121:HG3_Ill_MetaSV_2471:HG3_PB_SVrefine2PBcRDovetail_8851:HG3_PB_pbsv_17805;NumExactMatchSVs=8;ClusterMaxShiftDist=0.000949367;ClusterMaxSizeDiff=0.000949367;ClusterMaxEditDist=0.000949367;PBcalls=8;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-6321;DistBack=17192;DistForward=-6321;DistMin=-6321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=19:36840752-36847074;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1759.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:48:0|1:25:2:3:22:0|1:46:0:0:20:0/1:54:15:0/1:416:175:971228:103862:.
chr19	37046181	HG2_Ill_SVrefine2DISCOVARplusDovetail_6059	AGCGATAAAGTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG3_PB_HySA_27204:HG2_PB_SVrefine2PB10Xhap12_13219:HG4_PB_assemblyticsfalcon_12367:HG3_PB_assemblyticsfalcon_12563:HG2_PB_assemblyticsfalcon_12533:HG2_PB_assemblyticsPBcR_12153:HG3_Ill_Krunchall_23640:HG2_Ill_Krunchall_24056:HG2_Ill_Spiral_1168:HG3_PB_pbsv_17806:HG2_PB_HySA_32881:HG4_PB_HySA_26283:HG4_Ill_MetaSV_2394:HG3_Ill_MetaSV_2472:HG2_Ill_tnscope_1912:HG4_PB_pbsv_18044:HG4_PB_SVrefine2Falcon1Dovetail_11269:HG4_Ill_manta_4086:HG4_Ill_GATKHCSBGrefine_12223:HG4_10X_allpass_3261:HG3_PB_SVrefine2PBcRDovetail_8852:HG3_PB_SVrefine2Falcon1Dovetail_11242:HG3_Ill_scalpel_17138:HG3_Ill_manta_3941:HG3_Ill_GATKHCSBGrefine_11716:HG3_10X_allpass_3412:HG2_PB_pbsv_18123:HG2_PB_SVrefine2PB10Xhap12_13218:HG2_PB_SVrefine2Falcon2Bionano_8907:HG2_PB_SVrefine2Falcon1plusDovetail_5687:HG2_Ill_manta_4814:HG2_Ill_breakscan11_2598:HG2_Ill_SpiralSDKrefine_7873:HG2_Ill_SVrefine2DISCOVARplusDovetail_6059:HG2_Ill_MetaSV_2319:HG2_Ill_GATKHCSBGrefine_11835:HG2_10X_allpass_2775;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_2775:HG2_Ill_GATKHCSBGrefine_11835:HG2_Ill_MetaSV_2319:HG2_Ill_SVrefine2DISCOVARplusDovetail_6059:HG2_Ill_SpiralSDKrefine_7873:HG2_Ill_breakscan11_2598:HG2_Ill_manta_4814:HG2_PB_SVrefine2Falcon1plusDovetail_5687:HG2_PB_SVrefine2Falcon2Bionano_8907:HG2_PB_SVrefine2PB10Xhap12_13218:HG2_PB_pbsv_18123:HG3_10X_allpass_3412:HG3_Ill_GATKHCSBGrefine_11716:HG3_Ill_manta_3941:HG3_Ill_scalpel_17138:HG3_PB_SVrefine2Falcon1Dovetail_11242:HG3_PB_SVrefine2PBcRDovetail_8852:HG4_10X_allpass_3261:HG4_Ill_GATKHCSBGrefine_12223:HG4_Ill_manta_4086:HG4_PB_SVrefine2Falcon1Dovetail_11269:HG4_PB_pbsv_18044;NumExactMatchSVs=22;ClusterMaxShiftDist=0.0869565;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.0869565;PBcalls=17;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=27078;DistForward=-302;DistMin=-302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=19:37046182-37046511;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1760.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:33:0|1:26:1:1:30:0|1:47:0:0:23:0/1:46:22:0/1:27:8:971228:103862:.
chr19	37463442	HG4_Ill_GATKHC_28467	GAGCAGAAATTAGTGACTTAAATGTTGAGATGCCAGAAGACCTGGACTGGGGCATGAATTCCCAGCCCA	G	20	PASS	ClusterIDs=HG4_PB_HySA_26286:HG2_PB_HySA_32886:HG4_Ill_svaba_22196:HG4_Ill_manta_4088:HG4_Ill_Krunchall_24413:HG4_Ill_GATKHC_28467:HG4_Ill_GATKHCSBGrefine_12224:HG4_Ill_250bpfermikitraw_23373:HG4_Ill_150bpfermikitraw_22484:HG4_CG_vcfBeta_11222:HG2_PB_pbsv_18127:HG2_Ill_svaba_22217:HG2_Ill_scalpel_16790:HG2_Ill_breakscan11_2600:HG2_Ill_SpiralSDKrefine_7874:HG2_Ill_Krunchall_24060:HG2_Ill_GATKHC_28471:HG2_Ill_GATKHCSBGrefine_11836:HG2_Ill_250bpfermikitraw_23716:HG2_Ill_150bpfermikitraw_22341:HG2_CG_vcfBeta_10192:HG4_PB_pbsv_18047;NumClusterSVs=22;ExactMatchIDs=HG2_CG_vcfBeta_10192:HG2_Ill_150bpfermikitraw_22341:HG2_Ill_250bpfermikitraw_23716:HG2_Ill_GATKHCSBGrefine_11836:HG2_Ill_GATKHC_28471:HG2_Ill_Krunchall_24060:HG2_Ill_SpiralSDKrefine_7874:HG2_Ill_breakscan11_2600:HG2_Ill_scalpel_16790:HG2_Ill_svaba_22217:HG2_PB_pbsv_18127:HG4_CG_vcfBeta_11222:HG4_Ill_150bpfermikitraw_22484:HG4_Ill_250bpfermikitraw_23373:HG4_Ill_GATKHCSBGrefine_12224:HG4_Ill_GATKHC_28467:HG4_Ill_Krunchall_24413:HG4_Ill_manta_4088:HG4_Ill_svaba_22196;NumExactMatchSVs=19;ClusterMaxShiftDist=0.137405;ClusterMaxSizeDiff=0.137405;ClusterMaxEditDist=0.183206;PBcalls=4;Illcalls=16;TenXcalls=0;CGcalls=2;PBexactcalls=1;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=2;HG2count=12;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-68;DistBack=270;DistForward=15000;DistMin=270;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:37463441-37463512;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1761.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:22:0|1:31:0:2:22:1|0:0:15:36:0:0/1:29:23:./.:.:.:971228:103862:.
chr19	38614441	HG2_Ill_250bpfermikitraw_23725	CGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCT	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23725:HG2_PB_assemblyticsfalcon_12546:HG3_PB_assemblyticsfalcon_12578:HG2_PB_assemblyticsPBcR_12166:HG4_PB_pbsv_18056:HG2_PB_pbsv_18132:HG4_Ill_GATKHC_28479:HG4_Ill_GATKHCSBGrefine_12230:HG4_Ill_250bpfermikitraw_23380:HG2_Ill_Krunchall_24070:HG2_Ill_GATKHC_28487:HG2_Ill_GATKHCSBGrefine_11841;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23725:HG4_Ill_GATKHC_28479:HG4_Ill_GATKHCSBGrefine_12230:HG4_Ill_250bpfermikitraw_23380:HG2_Ill_Krunchall_24070:HG2_Ill_GATKHC_28487:HG2_Ill_GATKHCSBGrefine_11841;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0382166;ClusterMaxSizeDiff=0.0382166;ClusterMaxEditDist=0.103226;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=53609;DistForward=-12;DistMin=-12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=755;REFWIDENED=19:38614422-38615254;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1762.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:22:./.:21:3:7:12:./.:0:3:5:3:0/1:18:15:./.:.:.:.:.:.
chr19	39233969	HG2_PB_assemblyticsPBcR_12177	TGTCCCGAGCCCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCAGCCCCTCCTCCCTCAGACCCAGGAGTCCAG	T	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_12177:HG3_PB_HySA_27220:HG2_PB_assemblyticsfalcon_12558:HG4_PB_pbsv_18062:HG3_PB_pbsv_17822:HG2_PB_pbsv_18140:HG3_PB_assemblyticsfalcon_12588;NumClusterSVs=7;ExactMatchIDs=HG2_PB_assemblyticsPBcR_12177:HG3_PB_assemblyticsfalcon_12588;NumExactMatchSVs=2;ClusterMaxShiftDist=0.117647;ClusterMaxSizeDiff=0.117647;ClusterMaxEditDist=0.117647;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-72;DistBack=6840;DistForward=3375;DistMin=3375;DistMinlt1000=FALSE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=249;REFWIDENED=19:39233906-39234226;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1765.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:16:./.:22:2:6:14:./.:0:1:3:0:./.:5:2:./.:.:.:.:.:.
chr19	39393124	HG2_10X_SVrefine210Xhap12_12617	TGCTTTTGTATGGTTGTGAGCTAAGAATGGTCTTTACATTTTTAAACAGTTTCTAAAAATCAAAAGAATAATAATATTATATG	T	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_12561:HG2_PB_HySA_32907:HG3_PB_pbsv_17824:HG4_PB_pbsv_18066:HG2_PB_pbsv_18143:HG4_Ill_svaba_22212:HG4_Ill_GATKHCSBGrefine_12237:HG4_Ill_250bpfermikitraw_23391:HG3_PB_assemblyticsfalcon_12593:HG3_Ill_svaba_22447:HG3_Ill_SVrefine2DISCOVARDovetail_12816:HG3_Ill_GATKHCSBGrefine_11724:HG3_Ill_250bpfermikitraw_23065:HG2_PB_SVrefine2PBcRplusDovetail_5249:HG2_Ill_svaba_22233:HG2_Ill_SpiralSDKrefine_7890:HG2_Ill_SVrefine2DISCOVARplusDovetail_6085:HG2_Ill_GATKHCSBGrefine_11846:HG2_Ill_250bpfermikitraw_23736:HG2_10X_SVrefine210Xhap12_12617;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12617:HG2_Ill_250bpfermikitraw_23736:HG2_Ill_GATKHCSBGrefine_11846:HG2_Ill_SVrefine2DISCOVARplusDovetail_6085:HG2_Ill_SpiralSDKrefine_7890:HG2_Ill_svaba_22233:HG2_PB_SVrefine2PBcRplusDovetail_5249:HG3_Ill_250bpfermikitraw_23065:HG3_Ill_GATKHCSBGrefine_11724:HG3_Ill_SVrefine2DISCOVARDovetail_12816:HG3_Ill_svaba_22447:HG3_PB_assemblyticsfalcon_12593:HG4_Ill_250bpfermikitraw_23391:HG4_Ill_GATKHCSBGrefine_12237:HG4_Ill_svaba_22212;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0368098;PBcalls=7;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-82;DistBack=2895;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=84;REFWIDENED=19:39393125-39393290;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1767.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:20:0|1:32:0:1:20:0|1:24:0:0:9:0/1:19:14:./.:.:.:.:.:.
chr19	39559136	HG3_Ill_Krunchall_23663	GTTTACAATCCTTTAGCTAGACACAGAGTGCTGATTGGTGTGTTTTTACAGAGTGCTGATTGGTGCA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22364:HG2_PB_assemblyticsfalcon_12564:HG2_PB_assemblyticsPBcR_12183:HG3_PB_HySA_27225:HG2_PB_HySA_32911:HG3_PB_pbsv_17826:HG2_PB_pbsv_18145:HG3_Ill_svaba_22454:HG3_Ill_scalpel_17165:HG3_Ill_Krunchall_23663:HG3_Ill_GATKHC_28413:HG3_Ill_GATKHCSBGrefine_11725:HG3_Ill_250bpfermikitraw_23071:HG3_Ill_150bpfermikitraw_22394:HG2_Ill_svaba_22237:HG2_Ill_scalpel_16809:HG2_Ill_manta_4820:HG2_Ill_SpiralSDKrefine_7893:HG2_Ill_Krunchall_24083:HG2_Ill_GATKHC_28504:HG2_Ill_GATKHCSBGrefine_11848:HG2_Ill_250bpfermikitraw_23742;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22364:HG3_Ill_svaba_22454:HG3_Ill_scalpel_17165:HG3_Ill_Krunchall_23663:HG3_Ill_GATKHC_28413:HG3_Ill_GATKHCSBGrefine_11725:HG3_Ill_250bpfermikitraw_23071:HG3_Ill_150bpfermikitraw_22394:HG2_Ill_svaba_22237:HG2_Ill_scalpel_16809:HG2_Ill_manta_4820:HG2_Ill_SpiralSDKrefine_7893:HG2_Ill_Krunchall_24083:HG2_Ill_GATKHC_28504:HG2_Ill_GATKHCSBGrefine_11848:HG2_Ill_250bpfermikitraw_23742;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.075188;PBcalls=6;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=29648;DistForward=24525;DistMin=24525;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=87;REFWIDENED=19:39559094-39559246;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1768.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:22:0|1:19:2:1:20:0|1:24:0:0:20:0/1:18:16:./.:.:.:.:.:.
chr19	40124704	HG3_Ill_Krunchall_23667	ATCCTAAAAGGTATTGCCTAGGTCTTCCTCTATGGTTTTAGATCTAACATTTAAGTCTTTAATCCATCTTGAATTAAGTTTTG	A	20	PASS	ClusterIDs=HG2_PB_HySA_32923:HG3_PB_HySA_27234:HG4_PB_HySA_26313:HG4_PB_pbsv_18072:HG4_PB_assemblyticsfalcon_12396:HG4_Ill_svaba_22219:HG4_Ill_Krunchall_24438:HG4_Ill_GATKHC_28503:HG4_Ill_GATKHCSBGrefine_12241:HG4_Ill_250bpfermikitraw_23398:HG4_Ill_150bpfermikitraw_22513:HG4_10X_allpass_3264:HG3_PB_pbsv_17829:HG3_PB_assemblyticsfalcon_12597:HG3_Ill_svaba_22457:HG3_Ill_scalpel_17171:HG3_Ill_manta_3945:HG3_Ill_Krunchall_23667:HG3_Ill_GATKHC_28421:HG3_Ill_GATKHCSBGrefine_11727:HG3_Ill_250bpfermikitraw_23074:HG3_10X_allpass_3418:HG2_PB_pbsv_18150:HG2_Ill_svaba_22241:HG2_Ill_SpiralSDKrefine_7899:HG2_Ill_Krunchall_24089:HG2_Ill_GATKHC_28513:HG2_Ill_GATKHCSBGrefine_11851:HG2_Ill_250bpfermikitraw_23749:HG2_Ill_150bpfermikitraw_22371:HG2_10X_allpass_2777;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_2777:HG2_Ill_150bpfermikitraw_22371:HG2_Ill_250bpfermikitraw_23749:HG2_Ill_GATKHCSBGrefine_11851:HG2_Ill_GATKHC_28513:HG2_Ill_Krunchall_24089:HG2_Ill_SpiralSDKrefine_7899:HG2_Ill_svaba_22241:HG2_PB_pbsv_18150:HG3_10X_allpass_3418:HG3_Ill_250bpfermikitraw_23074:HG3_Ill_GATKHCSBGrefine_11727:HG3_Ill_GATKHC_28421:HG3_Ill_Krunchall_23667:HG3_Ill_manta_3945:HG3_Ill_scalpel_17171:HG3_Ill_svaba_22457:HG3_PB_assemblyticsfalcon_12597:HG3_PB_pbsv_17829:HG4_10X_allpass_3264:HG4_Ill_150bpfermikitraw_22513:HG4_Ill_250bpfermikitraw_23398:HG4_Ill_GATKHCSBGrefine_12241:HG4_Ill_GATKHC_28503:HG4_Ill_Krunchall_24438:HG4_Ill_svaba_22219:HG4_PB_assemblyticsfalcon_12396:HG4_PB_pbsv_18072;NumExactMatchSVs=28;ClusterMaxShiftDist=0.0809249;ClusterMaxSizeDiff=0.0809249;ClusterMaxEditDist=0.126437;PBcalls=8;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-82;DistBack=96847;DistForward=-81;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:40124703-40124788;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1769.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:34:0|1:21:0:1:30:0|1:30:1:0:24:0/1:30:21:./.:.:.:.:.:.
chr19	42400864	HG2_Ill_svaba_22260	CCTCCTCTCTCACCTCCCCTCTCCTCTCTCACCTCCCCCCTCCTCTCTCACCTCCCCCCTCCTCTCTCACCTCCCCT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8926:HG4_PB_pbsv_18089:HG3_PB_pbsv_17846:HG4_Ill_svaba_22237:HG3_Ill_svaba_22480:HG3_Ill_GATKHC_28445:HG2_Ill_svaba_22260:HG2_Ill_GATKHC_28535:HG2_PB_pbsv_18164:HG3_PB_SVrefine2PBcRDovetail_8874:HG3_PB_SVrefine2Falcon1Dovetail_11265;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_GATKHC_28535:HG2_Ill_svaba_22260:HG3_Ill_GATKHC_28445:HG3_Ill_svaba_22480:HG4_Ill_svaba_22237;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0131579;ClusterMaxSizeDiff=0.0130719;ClusterMaxEditDist=0.0263158;PBcalls=6;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-76;DistBack=2885;DistForward=-41;DistMin=-41;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=207;REFWIDENED=19:42400860-42401142;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1770.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:32:1/1:0:14:1:10:./.:3:5:1:5:./.:1:5:./.:.:.:.:.:.
chr19	44841489	HG4_Ill_250bpfermikitraw_23430	CATTTTGTATATGTGTAAAATATATATTATTATATATATTTTATATATAATAATATATATAATATATATTTTATATATAATAATATATATT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_18178:HG4_PB_pbsv_18103:HG4_Ill_Krunchall_24471:HG4_Ill_GATKHCSBGrefine_12259:HG4_Ill_250bpfermikitraw_23430:HG4_Ill_150bpfermikitraw_22547:HG2_Ill_Krunchall_24120:HG2_Ill_GATKHCSBGrefine_11867:HG2_Ill_250bpfermikitraw_23780:HG2_Ill_150bpfermikitraw_22403:HG4_Ill_manta_4096:HG2_PB_SVrefine2Falcon2Bionano_8937:HG2_Ill_manta_4827:HG2_10X_SVrefine210Xhap12_12651:HG2_Ill_SpiralSDKrefine_7924:HG4_Ill_svaba_22251:HG2_Ill_svaba_22274;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22403:HG2_Ill_250bpfermikitraw_23780:HG2_Ill_GATKHCSBGrefine_11867:HG2_Ill_Krunchall_24120:HG4_Ill_150bpfermikitraw_22547:HG4_Ill_250bpfermikitraw_23430:HG4_Ill_GATKHCSBGrefine_12259:HG4_Ill_Krunchall_24471;NumExactMatchSVs=8;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.181818;PBcalls=3;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-90;DistBack=17924;DistForward=-79;DistMin=-79;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=130;REFWIDENED=19:44841372-44841591;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1772.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:27:0|1:46:2:4:24:0|1:21:0:0:27:0/1:27:19:./.:.:.:.:.:.
chr19	45223152	HG2_Ill_scalpel_16840	TATATATATATATATATATATATATATATATATATATATACACACACACACAC	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22416:HG4_Ill_svaba_22261:HG4_Ill_scalpel_16474:HG4_Ill_manta_4099:HG4_Ill_Krunchall_24481:HG4_Ill_GATKHCSBGrefine_12264:HG4_Ill_150bpfermikitraw_22557:HG4_10X_allpass_3271:HG2_Ill_svaba_22280:HG2_Ill_scalpel_16840:HG2_Ill_manta_4828:HG2_Ill_Krunchall_24132:HG2_Ill_GATKHC_28569:HG2_Ill_GATKHCSBGrefine_11872:HG2_Ill_250bpfermikitraw_23792;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22416:HG4_Ill_svaba_22261:HG4_Ill_scalpel_16474:HG4_Ill_manta_4099:HG4_Ill_Krunchall_24481:HG4_Ill_GATKHCSBGrefine_12264:HG4_Ill_150bpfermikitraw_22557:HG4_10X_allpass_3271:HG2_Ill_svaba_22280:HG2_Ill_scalpel_16840:HG2_Ill_manta_4828:HG2_Ill_Krunchall_24132:HG2_Ill_GATKHC_28569:HG2_Ill_GATKHCSBGrefine_11872:HG2_Ill_250bpfermikitraw_23792;NumExactMatchSVs=15;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=10008;DistForward=104;DistMin=104;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:45223151-45223206;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1773.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:21:0|1:22:6:3:11:0|1:14:0:0:14:0/1:4:10:./.:.:.:.:.:.
chr19	45472943	HG2_PB_SVrefine2Falcon1plusDovetail_5721	ACTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTACTCTGTCACCCAGACTGGAGTCCAGTGGCATGATCTCGGCTCACTGCGACCTCCACCTCCCAGGTTCAAGCGATTCTTTTGCCTCCGCCTACCAAGTAGCTGGGATTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGTTGGTCTCGAACTCCTGACCTCAAGTGTTGGCTTCCCAAAGTGCTGGGATTATAGGTGTAAGCCACCACGCCCAGCCTCGTTTTGGTTTTGGTATCTGTTGTTGCTGCTGATTCTCGCTCATAATGTCGTTTCCTTTTGTGCCTGGCTTATCTCTGTCTGTGTCCTAGTCATTATACTTGAAAAGTTATTTGTAGGAATTTCAGGGCTAGGATGAGCATATTTTCCTACAGAGAGGATTGCCTTTGCTTCTGCCTGGGGGCATTACCAAGTCCTAGGTTTCCTTGCACCAGGTTCAGGGCTTGAGCTGCCCTTCGTGACTCCTTATCCCACGAGTGGCCTTGCATACTTCGCCCTGCATACCTGTTGTGCAACTCCTGGGAATGGGTAGGCCACCTGGTTCCTTCCTTCTCAGGGGTGGAGGCTTGCACCTTGTGGGGTCTTAGTTTCCTATAGGGTAGGTCTCTGGTTACCTCATATGTTGTATGTGCCCTGGGCTAGCATTTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCGTGGTTCACTGCAGCCTCGACCTCCTGGGCTCAGGTGATTCTCCCACCTCAGCCTCCTGAGTAGCTGGGAATATAGGCATGGTGCGTGCTGCCATGCCTGGCTAATTTTTGTATTTTTTGTAGAAACTGTGTGTTGCCCAGGCTGGTCTCAAACTCCTGGGCTCAAGCAATCCACCTACCTCAGCCTCCCAGCGTGCTGGGGTTACAGGTGTGAGCCACCGCGCCCAGCCTAGGCCAGCATTTTTGTCACCCACCAAAACACCTAGCAGATGTCCTCGGACACATGAAGAAGCTTATAGGGCTCCTTTACTTATTCTTTTTTTTTTTTTCCCCTAGACCTGCAAATCCAAGATCCTTTACTT	A	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_12845:HG2_PB_pbsv_18185:HG3_10X_allpass_3420:HG2_10X_allpass_2779:HG3_PB_pbsv_17868:HG3_PB_SVrefine2PBcRDovetail_8887:HG2_PB_SVrefine2PB10Xhap12_13264:HG2_PB_SVrefine2Falcon1plusDovetail_5721:HG2_10X_SVrefine210Xhap12_12656;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12656:HG2_PB_SVrefine2Falcon1plusDovetail_5721:HG2_PB_SVrefine2PB10Xhap12_13264:HG3_PB_SVrefine2PBcRDovetail_8887;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0594595;ClusterMaxSizeDiff=0.0594595;ClusterMaxEditDist=0.0838972;PBcalls=5;Illcalls=1;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-1142;DistBack=5717;DistForward=-911;DistMin=-911;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=241;REFWIDENED=19:45472944-45474326;PctSeqSimilarity=0.896;PctSizeSimilarity=0.9991;PctRecOverlap=0.8575;SizeDiff=-1;StartDistance=-162;EndDistance=-163;GTMatch=0;TruScore=91;MatchId=1774.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:33:38:0|1:30:1:1:27:./.:8:2:27:0:0/0:49:2:0/1:108:40:1016:.:.
chr19	45527173	HG2_Ill_GATKHCSBGrefine_11875	TAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCACGTTGGTCAGGCTGATCTCAAAATTCTGACCTTGTGACCCACCCGCCTCGGCCTCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12658:HG3_PB_HySA_27278:HG2_PB_pbsv_18187:HG3_PB_pbsv_17870:HG4_PB_pbsv_18110:HG2_PB_HySA_32985:HG4_PB_SVrefine2Falcon1Dovetail_11299:HG4_Ill_GATKHCSBGrefine_12265:HG3_PB_SVrefine2PBcRDovetail_8889:HG3_PB_SVrefine2Falcon1Dovetail_11284:HG3_Ill_GATKHCSBGrefine_11747:HG3_Ill_150bpfermikitraw_22448:HG2_PB_SVrefine2PBcRplusDovetail_5269:HG2_PB_SVrefine2PB10Xhap12_13267:HG2_PB_SVrefine2Falcon2Bionano_8940:HG2_Ill_SpiralSDKrefine_7933:HG2_Ill_GATKHCSBGrefine_11875:HG2_Ill_150bpfermikitraw_22422;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12658:HG4_PB_SVrefine2Falcon1Dovetail_11299:HG4_Ill_GATKHCSBGrefine_12265:HG3_PB_SVrefine2PBcRDovetail_8889:HG3_PB_SVrefine2Falcon1Dovetail_11284:HG3_Ill_GATKHCSBGrefine_11747:HG3_Ill_150bpfermikitraw_22448:HG2_PB_SVrefine2PBcRplusDovetail_5269:HG2_PB_SVrefine2PB10Xhap12_13267:HG2_PB_SVrefine2Falcon2Bionano_8940:HG2_Ill_SpiralSDKrefine_7933:HG2_Ill_GATKHCSBGrefine_11875:HG2_Ill_150bpfermikitraw_22422;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0324324;ClusterMaxSizeDiff=0.0324324;ClusterMaxEditDist=0.043956;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-92;DistBack=8992;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=92;REFWIDENED=19:45527174-45527357;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1775.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:42:1/1:2:19:2:17:./.:0:3:0:1:1/1:0:21:./.:.:.:.:.:.
chr19	45904007	HG3_Ill_manta_3949	ACACCCAGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTTCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	A	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_11878:HG2_10X_allpass_2780:HG2_PB_assemblyticsPBcR_12243:HG3_PB_assemblyticsfalcon_12657:HG2_PB_pbsv_18191:HG3_PB_pbsv_17874:HG3_PB_HySA_27280:HG3_Ill_MetaSV_2490:HG2_PB_HySA_32989:HG3_PB_SVrefine2PBcRDovetail_8892:HG3_PB_SVrefine2Falcon1Dovetail_11288:HG3_Ill_scalpel_17204:HG3_Ill_manta_3949:HG3_Ill_SVrefine2DISCOVARDovetail_12850:HG3_Ill_GATKHCSBGrefine_11750:HG3_10X_allpass_3421:HG2_PB_SVrefine2PBcRplusDovetail_5273:HG2_PB_SVrefine2PB10Xhap12_13273:HG2_PB_SVrefine2Falcon2Bionano_8944:HG2_PB_SVrefine2Falcon1plusDovetail_5726:HG2_Ill_scalpel_16847:HG2_Ill_SpiralSDKrefine_7938:HG2_Ill_SVrefine2DISCOVARplusDovetail_6126;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11878:HG3_PB_SVrefine2PBcRDovetail_8892:HG3_PB_SVrefine2Falcon1Dovetail_11288:HG3_Ill_scalpel_17204:HG3_Ill_manta_3949:HG3_Ill_SVrefine2DISCOVARDovetail_12850:HG3_Ill_GATKHCSBGrefine_11750:HG3_10X_allpass_3421:HG2_PB_SVrefine2PBcRplusDovetail_5273:HG2_PB_SVrefine2PB10Xhap12_13273:HG2_PB_SVrefine2Falcon2Bionano_8944:HG2_PB_SVrefine2Falcon1plusDovetail_5726:HG2_Ill_scalpel_16847:HG2_Ill_SpiralSDKrefine_7938:HG2_Ill_SVrefine2DISCOVARplusDovetail_6126;NumExactMatchSVs=15;ClusterMaxShiftDist=0.110063;ClusterMaxSizeDiff=0.110063;ClusterMaxEditDist=0.110063;PBcalls=12;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-875;DistForward=-313;DistMin=-875;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=19:45904008-45904349;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1776.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:13:33:./.:11:5:0:27:1|0:0:13:33:0:0/1:19:10:0/1:15:6:.:.:.
chr19	46097979	HG2_Ill_SpiralSDKrefine_7942	GCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGAGGATCGCCTGAGGTCAGGAGTTCAAGATCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCACATA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12662:HG4_PB_HySA_26363:HG4_PB_pbsv_18115:HG4_PB_assemblyticsfalcon_12455:HG4_PB_SVrefine2Falcon1Dovetail_11303:HG4_Ill_manta_4100:HG4_Ill_MetaSV_2416:HG4_Ill_GATKHCSBGrefine_12267:HG4_10X_allpass_3272:HG2_PB_pbsv_18192:HG2_Ill_SpiralSDKrefine_7942:HG2_Ill_MetaSV_2344:HG2_Ill_GATKHCSBGrefine_11880:HG2_10X_allpass_2781:HG4_PB_SVrefine2PBcRDovetail_9122:HG4_Ill_SVrefine2DISCOVARDovetail_12636;NumClusterSVs=16;ExactMatchIDs=HG2_10X_allpass_2781:HG2_Ill_GATKHCSBGrefine_11880:HG2_Ill_MetaSV_2344:HG2_Ill_SpiralSDKrefine_7942:HG2_PB_pbsv_18192:HG4_10X_allpass_3272:HG4_Ill_GATKHCSBGrefine_12267:HG4_Ill_MetaSV_2416:HG4_Ill_manta_4100:HG4_PB_SVrefine2Falcon1Dovetail_11303:HG4_PB_assemblyticsfalcon_12455:HG4_PB_pbsv_18115;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00732601;ClusterMaxSizeDiff=0.00732601;ClusterMaxEditDist=0.021978;PBcalls=6;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-135;DistBack=642;DistForward=23479;DistMin=642;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=66;REFWIDENED=19:46097970-46098170;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1777.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:15:0|1:27:0:2:15:0|1:34:0:0:10:0/1:35:23:./.:.:.:.:.:.
chr19	46582071	HG3_PB_pbsv_17878	CGTCGTCAGTAGACATCGCGCAGGCGTCGTCAGTAGACATCGCGCAGGCGTCGTCAGTAGACATCGCGCAGG	C	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11291:HG2_PB_pbsv_18195:HG3_PB_pbsv_17878:HG3_PB_HySA_27286;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_17878;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0277778;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-71;DistBack=-209;DistForward=-38;DistMin=-209;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=19:46582070-46582143;PctSeqSimilarity=0.9915;PctSizeSimilarity=0.9861;PctRecOverlap=0.8904;SizeDiff=-1;StartDistance=8;EndDistance=7;GTMatch=0;TruScore=95;MatchId=1778.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:30:./.:6:16:16:1:./.:4:0:8:0:./.:35:2:./.:.:.:.:.:.
chr19	46796793	HG2_Ill_SVrefine2DISCOVARplusDovetail_6131	AAAAAAAAAAATTAAGAGATAGAGGCCGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTTCGCCACTGCAGTCCGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_24143:HG4_PB_assemblyticsfalcon_12463:HG4_PB_pbsv_18122:HG2_PB_pbsv_18197:HG4_PB_SVrefine2Falcon1Dovetail_11306:HG4_Ill_GATKHCSBGrefine_12271:HG2_PB_HySA_32995:HG4_10X_allpass_3274:HG4_Ill_manta_4103:HG4_Ill_SVrefine2DISCOVARDovetail_12643:HG2_PB_SVrefine2PBcRplusDovetail_5276:HG2_PB_SVrefine2PB10Xhap12_13276:HG2_PB_SVrefine2Falcon1plusDovetail_5729:HG2_Ill_SVrefine2DISCOVARplusDovetail_6131:HG2_10X_SVrefine210Xhap12_12667:HG4_Ill_MetaSV_2418:HG3_PB_SVrefine2Falcon1Dovetail_11292;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12667:HG2_Ill_SVrefine2DISCOVARplusDovetail_6131:HG2_PB_SVrefine2Falcon1plusDovetail_5729:HG2_PB_SVrefine2PB10Xhap12_13276:HG2_PB_SVrefine2PBcRplusDovetail_5276:HG4_Ill_SVrefine2DISCOVARDovetail_12643;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.085758;PBcalls=9;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-328;DistBack=-341;DistForward=-299;DistMin=-341;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=318;REFWIDENED=19:46796794-46797439;PctSeqSimilarity=0.9758;PctSizeSimilarity=1;PctRecOverlap=0.9635;SizeDiff=0;StartDistance=-12;EndDistance=-12;GTMatch=0;TruScore=97;MatchId=1779.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:25:./.:19:12:8:13:./.:2:30:32:0:0/1:25:20:0/1:20:4:.:.:.
chr19	46816970	HG2_PB_SVrefine2PBcRplusDovetail_5277	TGGATTGCACTGGCACGATCTCGGCTCACTTCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCTTCAGCCTCCCGACTAGCTGGGATTACACGCAACAACACGCCCAGCTAATTTTTATATTTTTAATAGAGAAGGAGTTTCACCAGGTTGGCCGGTCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCCCCTCAGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCACCCGGCCCATGTTGTGGTTTATATCAGTAGTTCCTTTGTAAATAGTGAACAGTATTCCATGGTATGAATAGAGCACAGGTTTTTTTTTTATCCATTCACCAGTTAGAAGACATTGGGCTGTTTCCAAGTTTGGGTGATTACAAAAAAACAGCTACTGTAAACATTCTCATACAAGATTTTATGAGATCACATGTTTTCATTTCTCTTGGGTAAACAGCTAGGATTGGAATGGATGGGTTATATAGTAAGTGTATATTTAATCTAAGAAACTGCCATGGCTGGGCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAAGCCAAGGAAGGAGGATGACTAGAGCCTCTGAGGTGAAGACCAGCCTGGGCAAAGTGGTTAAGACTCAACCGCAAAAAAAGAAAAACAGAAAACCTGAAAACAAACCAAAAAAAAAAAACAAACACAAAAATATATATGGTTTTCATGCAGTAAATTCTGTTTATGGTACACAGTTCTGTGAATTTTGACACATGCATGCAATTGTGTAACCACTATCACAATCCAGCTATTGACCAATTAGTGTGGTTACACAATTACCACAATTTATTTATTTTTATTTTTATTTATTTATTTTTTTTGAGACAGAGTTTTGCCCTTGTCACTCAGGCTGGAGTGCACTGGCACGATCTCGGCTCACTTCAACTTCCGCCTCCCGGGTTCAAGCAATTCTTCTGCTTCAGCCTCCTGAGTAGCTGGGATTACAGCTGGGATTACACCAAGCCCAGCTAATTTTTGTATTTTTAGTAGAGTCGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCACACCCGGCCATTACCACGATTTTTTACACAAAAATATTCTCTTGTAGTAAACCCCTCCCACACTCCCATGTCCCTGGCAACCACTGTCCTCAGACCCCAGAGTTTTGCTTTTTCCAGAGGGTCACATACAGGGAATCCTACAGTATGTAGCCTTTTGGGCCTGGCTCTTACTTAGCTTGATATATTTAAAATTCCTCCATGTTGTGGTTTTTCTTTCTTGGTTTTTTTGTTTTGTTTTTGAGACAGAGTCTCATTCTGTTGCCCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12668:HG2_10X_allpass_2783:HG4_PB_pbsv_18123:HG2_PB_pbsv_18198:HG4_Ill_GATKHCSBGrefine_12272:HG4_10X_allpass_3275:HG2_Ill_GATKHCSBGrefine_11883:HG4_PB_SVrefine2PBcRDovetail_9126:HG2_PB_SVrefine2PBcRplusDovetail_5277:HG2_PB_SVrefine2PB10Xhap12_13278:HG2_PB_SVrefine2Falcon1plusDovetail_5730;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12668:HG4_PB_SVrefine2PBcRDovetail_9126:HG2_PB_SVrefine2PBcRplusDovetail_5277:HG2_PB_SVrefine2PB10Xhap12_13278:HG2_PB_SVrefine2Falcon1plusDovetail_5730;NumExactMatchSVs=5;ClusterMaxShiftDist=0.131509;ClusterMaxSizeDiff=0.131509;ClusterMaxEditDist=0.158875;PBcalls=6;Illcalls=2;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-1401;DistBack=18230;DistForward=-1023;DistMin=-1023;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=570;REFWIDENED=19:46816971-46818941;PctSeqSimilarity=0.9451;PctSizeSimilarity=1;PctRecOverlap=0.7475;SizeDiff=0;StartDistance=-354;EndDistance=-354;GTMatch=0;TruScore=89;MatchId=1780.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:34:13:0|1:25:2:1:10:0/0:33:0:43:0:0/0:44:0:0/1:120:48:1343:.:.
chr19	46941767	HG4_Ill_SVrefine2DISCOVARDovetail_12645	CGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATTGCCTGAGCTCAGGAGTTCAAGACTAGCTGGGCAACATGGTGAAATCCTGTCTCTACTAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCTTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTTCTTCTCAAAAAAAAAAGAAAAAAAAAAAGTCAGTGCAAAGGCCCTGAGGCTGGAGCCTGCCTGGTGTACTTGAAGAACAGCAGAAACCCGTGGTGCCTGGCAGCAGAGGGAGCAAGGGAGTGTTGAGAAGAAAGCCCAAGAAAAAGCAGGCCGCGCAAGAGAGGAGGTGACAGCCAGATCTTACAAGACCTCAAAGCTCCTGGTGGGGACTTGGGACTTTTCTCTGGGTGAGATGGAACACCCAAGGTGGGGAGGTTTGATGAGGTAACTGAGGGCGTTATAGGAGTTTGCCAGTCAGGAATGATGTTGGAGTAGGAGGATGTAGGTTTCTGAGAGTTGAAAAGGAACAATTAATCCTTCACACAGCAAATGTATATATTTATACATTTAACTCTGGCTCTGTTCCAAACCTTGTGTTAACAGTGAGCCCAATAGCTATTAATACAAATAGAATGTAATGCCAGGAATTTAGCCACTCATAACTTACATGAGTTATGAACTTTTTTTTCTTTTTGAGACAGGGTCTCTCTCTGTCACCCAGGCTGGAGTGCAGTGGCGTCATCCTGGCTCACTGCAATCTCTGCCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGAGCACACCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGGTCTCAACATGTTGCCCAGGCTGGTCACGAACTCCTGACCTCAGGTGATACACTTGCCTCGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCTGCCTGAGGTGTCGTTTTTGACATTTAAATCTGCAATCTAGGCTGAGGATGGTGGCGCACGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCCTCCACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATGATGCCACTGCACTCCAGCCTAAGTGACAGAGTAAGACTCTCTCTCAAAAAAAATTAAAAAAAAAAAAAATAAATAAATAATAAATCTCCAATCTACCTCTAACTTTATACCTTTCCAGATGGCTATTGAGTGTCTTAGTTTTATGGAGAAAAGTCCATCTCGTTTTCAATGATATGAAATTCCACTGTTAAAATGTAAATTCCCAGCTGGGTATGGT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6132:HG4_PB_pbsv_18124:HG3_PB_pbsv_17881:HG2_PB_pbsv_18200:HG4_Ill_MetaSV_2419:HG3_Ill_MetaSV_2492:HG2_Ill_MetaSV_2347:HG3_PB_pbsv_17880:HG4_PB_SVrefine2PBcRDovetail_9127:HG4_PB_SVrefine2Falcon1Dovetail_11307:HG4_Ill_SVrefine2DISCOVARDovetail_12645:HG3_PB_SVrefine2PBcRDovetail_8895:HG3_PB_SVrefine2Falcon1Dovetail_11294:HG3_Ill_SVrefine2DISCOVARDovetail_12856:HG2_PB_SVrefine2PBcRplusDovetail_5278:HG2_PB_SVrefine2PB10Xhap12_13279:HG2_PB_SVrefine2Falcon2Bionano_8947:HG2_PB_SVrefine2Falcon1plusDovetail_5731;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6132:HG4_PB_SVrefine2PBcRDovetail_9127:HG4_PB_SVrefine2Falcon1Dovetail_11307:HG4_Ill_SVrefine2DISCOVARDovetail_12645:HG3_PB_SVrefine2PBcRDovetail_8895:HG3_PB_SVrefine2Falcon1Dovetail_11294:HG3_Ill_SVrefine2DISCOVARDovetail_12856:HG2_PB_SVrefine2PBcRplusDovetail_5278:HG2_PB_SVrefine2PB10Xhap12_13279:HG2_PB_SVrefine2Falcon2Bionano_8947:HG2_PB_SVrefine2Falcon1plusDovetail_5731;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0529177;ClusterMaxSizeDiff=0.0529177;ClusterMaxEditDist=0.053701;PBcalls=12;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-1414;DistBack=26804;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1702;REFWIDENED=19:46941768-46944883;PctSeqSimilarity=0.9914;PctSizeSimilarity=1;PctRecOverlap=0.9951;SizeDiff=0;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=99;MatchId=1781.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:39:1/1:2:13:0:21:./.:5:0:4:0:0/0:8:0:0/1:7:57:1531:.:.
chr19	47528265	HG2_PB_SVrefine2Falcon1plusDovetail_5735	ACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCCTTATCCTCCCAAAGTGCTGGGATTGCAGGCGTGAGGCGCCGTGCCCGGCTTTTACAGCCTTCTTTCTTCCCATAGCACTTATTGTCATCTGACACTCTCTGTATTTATCTTGTTATTTTGTGTCATTCACCAACAGCCTCTTGGTTGCTGAGCCTGGAGTAGCATCTGGGACACAATGAAGGCTTACTAAATTGTTGAGTGACTGTGGCAGTTGAGGGAAGGAGGGGTGACATCTTTATTTATTTATTTATAGACGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTCGGCTCACTGCAACCTCCTTCTCCTGGGTTCAAGCGATTCTCCTGCTTCAGCCTCCCTAATAGCTGGGATTACAGGCATGCGCCACCACGCCCAGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5281:HG2_PB_pbsv_18205:HG4_10X_allpass_3277:HG2_PB_HySA_33007:HG4_PB_HySA_26381:HG4_Ill_manta_4104:HG2_PB_SVrefine2Falcon1plusDovetail_5735:HG2_Ill_manta_4833:HG2_Ill_GATKHCSBGrefine_11887:HG2_10X_allpass_2785:HG4_PB_pbsv_18132:HG4_Ill_MetaSV_2422:HG2_Ill_tnscope_1917:HG4_PB_SVrefine2Falcon1Dovetail_11311:HG2_PB_SVrefine2Falcon2Bionano_8950;NumClusterSVs=15;ExactMatchIDs=HG2_10X_allpass_2785:HG2_Ill_GATKHCSBGrefine_11887:HG2_Ill_manta_4833:HG2_PB_SVrefine2Falcon1plusDovetail_5735:HG4_Ill_manta_4104:HG4_PB_HySA_26381;NumExactMatchSVs=6;ClusterMaxShiftDist=0.165517;ClusterMaxSizeDiff=0.165517;ClusterMaxEditDist=0.216092;PBcalls=8;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-467;DistBack=-438;DistForward=-433;DistMin=-438;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=236;REFWIDENED=19:47528066-47528768;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1782.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:25:0|1:26:5:2:12:1|0:0:7:25:1:0/1:65:21:0/1:22:6:.:.:.
chr19	47993679	HG4_Ill_svaba_22286	ATGTGTGTGGTGTGGTGTGATGTGTGTGGTGTGGTGTGTGTAGTGTATGTTTGG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_22450:HG4_PB_assemblyticsfalcon_12482:HG2_PB_assemblyticsPBcR_12270:HG2_PB_HySA_33016:HG4_PB_pbsv_18134:HG3_PB_assemblyticsfalcon_12684:HG3_PB_pbsv_17891:HG2_PB_pbsv_18208:HG4_Ill_svaba_22286:HG4_Ill_scalpel_16494:HG4_Ill_Krunchall_24506:HG4_Ill_GATKHCSBGrefine_12282:HG4_Ill_250bpfermikitraw_23473:HG4_Ill_150bpfermikitraw_22582:HG3_Ill_svaba_22527:HG3_Ill_scalpel_17215:HG3_Ill_Krunchall_23730:HG3_Ill_GATKHCSBGrefine_11762:HG3_Ill_250bpfermikitraw_23145:HG3_Ill_150bpfermikitraw_22469:HG2_PB_assemblyticsfalcon_12660:HG2_Ill_svaba_22308:HG2_Ill_scalpel_16862:HG2_Ill_manta_4834:HG2_Ill_SpiralSDKrefine_7955:HG2_Ill_GATKHCSBGrefine_11891:HG2_Ill_250bpfermikitraw_23823;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22450:HG4_Ill_svaba_22286:HG4_Ill_scalpel_16494:HG4_Ill_Krunchall_24506:HG4_Ill_GATKHCSBGrefine_12282:HG4_Ill_250bpfermikitraw_23473:HG4_Ill_150bpfermikitraw_22582:HG3_Ill_svaba_22527:HG3_Ill_scalpel_17215:HG3_Ill_Krunchall_23730:HG3_Ill_GATKHCSBGrefine_11762:HG3_Ill_250bpfermikitraw_23145:HG3_Ill_150bpfermikitraw_22469:HG2_PB_assemblyticsfalcon_12660:HG2_Ill_svaba_22308:HG2_Ill_scalpel_16862:HG2_Ill_manta_4834:HG2_Ill_SpiralSDKrefine_7955:HG2_Ill_GATKHCSBGrefine_11891:HG2_Ill_250bpfermikitraw_23823;NumExactMatchSVs=20;ClusterMaxShiftDist=0.244898;ClusterMaxSizeDiff=0.244898;ClusterMaxEditDist=0.265306;PBcalls=8;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-53;DistBack=-86;DistForward=62266;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=19:47993678-47993804;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1783.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:27:1/1:0:9:0:7:./.:9:27:12:45:1/1:0:15:./.:.:.:.:.:.
chr19	48837689	HG2_Ill_250bpfermikitraw_23832	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTC	T	20	PASS	ClusterIDs=HG2_PB_pbsv_18213:HG2_PB_assemblyticsPBcR_12279:HG3_Ill_svaba_22536:HG3_Ill_scalpel_17225:HG3_Ill_manta_3952:HG3_Ill_Krunchall_23741:HG3_Ill_GATKHC_28516:HG3_Ill_GATKHCSBGrefine_11764:HG3_Ill_150bpfermikitraw_22478:HG2_Ill_svaba_22313:HG2_Ill_scalpel_16869:HG2_Ill_SpiralSDKrefine_7962:HG2_Ill_Krunchall_24172:HG2_Ill_GATKHC_28614:HG2_Ill_GATKHCSBGrefine_11894:HG2_Ill_250bpfermikitraw_23832:HG2_Ill_150bpfermikitraw_22463;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22463:HG2_Ill_250bpfermikitraw_23832:HG2_Ill_GATKHCSBGrefine_11894:HG2_Ill_GATKHC_28614:HG2_Ill_Krunchall_24172:HG2_Ill_SpiralSDKrefine_7962:HG2_Ill_scalpel_16869:HG2_Ill_svaba_22313:HG3_Ill_150bpfermikitraw_22478:HG3_Ill_GATKHCSBGrefine_11764:HG3_Ill_GATKHC_28516:HG3_Ill_Krunchall_23741:HG3_Ill_manta_3952:HG3_Ill_scalpel_17225:HG3_Ill_svaba_22536;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0970874;ClusterMaxSizeDiff=0.0970874;ClusterMaxEditDist=0.0970874;PBcalls=2;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-52;DistBack=-23;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:48837688-48837743;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1784.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:42:0|1:23:5:6:36:1|0:0:12:10:0:0/1:20:18:./.:.:.:2182339:.:.
chr19	48845546	HG3_Ill_svaba_22537	AGGAAGGAAGGAAGGACAGGGAGGGAAGGGAAGGGAAAGAAAAGAGGAAGAATG	A	20	PASS	ClusterIDs=HG2_Ill_scalpel_16870:HG2_PB_pbsv_18214:HG3_PB_pbsv_17894:HG3_PB_HySA_27316:HG2_PB_HySA_33032:HG3_Ill_svaba_22537:HG3_Ill_scalpel_17226:HG3_Ill_GATKHCSBGrefine_11765:HG2_PB_assemblyticsfalcon_12668:HG2_Ill_svaba_22314;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_scalpel_16870:HG3_Ill_svaba_22537:HG3_Ill_scalpel_17226:HG3_Ill_GATKHCSBGrefine_11765:HG2_PB_assemblyticsfalcon_12668:HG2_Ill_svaba_22314;NumExactMatchSVs=6;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.037037;PBcalls=5;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-53;DistBack=7737;DistForward=23020;DistMin=7737;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=67;REFWIDENED=19:48845545-48845667;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1785.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:25:0|1:25:5:3:19:1|0:0:5:13:1:0/1:14:6:./.:.:.:2182339:.:.
chr19	49338247	HG3_PB_pbsv_17899	GAGGGAGGAGGGGCTGAGGTCTGGACTCCTGGGTCCGAGGAAGTAGGGCCTGGGGGCCTGGACTCCTGGGTCTGAGGGAGGAGGTGCTGGGAGCCTGGACTCCTGGGTCT	G	10	PASS	ClusterIDs=HG2_PB_pbsv_18219:HG3_PB_pbsv_17899:HG2_PB_SVrefine2PB10Xhap12_13291:HG2_PB_PB10Xdip_15933;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_17899;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0267857;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.0357143;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-109;DistBack=36;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=682;REFWIDENED=19:49337615-49338368;PctSeqSimilarity=0.9927;PctSizeSimilarity=0.9909;PctRecOverlap=0.8288;SizeDiff=-1;StartDistance=19;EndDistance=18;GTMatch=0;TruScore=93;MatchId=1786.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:10:./.:20:1:2:6:./.:1:0:1:0:./.:1:0:./.:.:.:2182339:.:.
chr19	49359569	HG3_Ill_GATKHC_28525	GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCATCTCTACTAAAAATACAAAAAAGTTGGGCCAGGCGCA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13292:HG4_PB_assemblyticsfalcon_12491:HG4_PB_SVrefine2Falcon1Dovetail_11317:HG2_PB_assemblyticsfalcon_12673:HG2_PB_SVrefine2Falcon1plusDovetail_5742:HG4_PB_pbsv_18145:HG3_PB_pbsv_17900:HG2_PB_HySA_33036:HG2_PB_pbsv_18221:HG2_PB_SVrefine2PB10Xhap12_13293:HG2_PB_PB10Xdip_15934:HG2_PB_PB10Xdip_15935:HG4_PB_SVrefine2PBcRDovetail_9132:HG4_Ill_GATKHCSBGrefine_12287:HG4_10X_allpass_3278:HG3_Ill_scalpel_17230:HG3_Ill_GATKHC_28525:HG3_Ill_GATKHCSBGrefine_11770:HG2_Ill_scalpel_16873:HG2_Ill_GATKHC_28618:HG2_Ill_GATKHCSBGrefine_11898:HG2_10X_SVrefine210Xhap12_12687:HG3_Ill_MetaSV_2500:HG3_PB_SVrefine2PBcRDovetail_8904:HG2_PB_SVrefine2PBcRplusDovetail_5288;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12687:HG2_Ill_GATKHCSBGrefine_11898:HG2_Ill_GATKHC_28618:HG2_Ill_scalpel_16873:HG2_PB_PB10Xdip_15934:HG4_PB_SVrefine2PBcRDovetail_9132:HG4_Ill_GATKHCSBGrefine_12287:HG4_10X_allpass_3278:HG3_Ill_scalpel_17230:HG3_Ill_GATKHC_28525:HG3_Ill_GATKHCSBGrefine_11770;NumExactMatchSVs=11;ClusterMaxShiftDist=0.130909;ClusterMaxSizeDiff=0.130909;ClusterMaxEditDist=0.295203;PBcalls=15;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=7;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-136;DistBack=12168;DistForward=-17;DistMin=-17;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=131;REFWIDENED=19:49359559-49359825;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1787.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:18:0|1:14:2:1:16:1|0:0:15:36:1:0/1:32:7:./.:.:.:2182339:.:.
chr19	49889475	HG2_Ill_breakscan11_2603	CAGATCATGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCCCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAACAAAAAAACAAAAAAAAAAACAGCA	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13299:HG2_PB_PB10Xdip_15949:HG2_Ill_Krunchall_24177:HG2_PB_assemblyticsPBcR_12286:HG2_Ill_Krunchall_24176:HG4_PB_HySA_26400:HG2_Ill_MetaSV_2353:HG4_Ill_MetaSV_2431:HG4_Ill_GATKHCSBGrefine_12288:HG4_10X_allpass_3280:HG2_PB_pbsv_18228:HG2_Ill_breakscan11_2603:HG2_Ill_GATKHCSBGrefine_11899:HG2_10X_allpass_2787:HG4_PB_pbsv_18150:HG4_PB_SVrefine2PBcRDovetail_9136:HG2_PB_SVrefine2PBcRplusDovetail_5293;NumClusterSVs=17;ExactMatchIDs=HG2_10X_allpass_2787:HG2_Ill_GATKHCSBGrefine_11899:HG2_Ill_breakscan11_2603:HG2_PB_PB10Xdip_15949:HG4_Ill_MetaSV_2431:HG4_Ill_GATKHCSBGrefine_12288:HG4_10X_allpass_3280:HG2_PB_pbsv_18228;NumExactMatchSVs=8;ClusterMaxShiftDist=0.113924;ClusterMaxSizeDiff=0.113924;ClusterMaxEditDist=0.113924;PBcalls=8;Illcalls=7;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-324;DistBack=25010;DistForward=-318;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=19:49889464-49889805;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1788.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:19:0|1:22:1:2:15:0|1:34:0:0:8:0/1:31:12:0/1:20:11:2182339:.:.
chr19	50378550	HG4_Ill_Krunchall_24526	AGTGAGGCTCAGAGAGCTTAGGACACTGGCAAAAAAGCACACAGCTACACAGGGCACAAGTGGGGCTGAAACT	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_1175:HG3_PB_HySA_27335:HG2_PB_HySA_33073:HG3_PB_assemblyticsfalcon_12716:HG4_PB_pbsv_18157:HG3_PB_pbsv_17913:HG2_PB_pbsv_18236:HG4_PB_SVrefine2PBcRDovetail_9138:HG4_PB_SVrefine2Falcon1Dovetail_11325:HG4_PB_HySA_26405:HG4_Ill_svaba_22308:HG4_Ill_scalpel_16510:HG4_Ill_SVrefine2DISCOVARDovetail_12668:HG4_Ill_Krunchall_24526:HG4_Ill_GATKHCSBGrefine_12294:HG4_Ill_250bpfermikitraw_23489:HG4_Ill_150bpfermikitraw_22603:HG3_PB_SVrefine2PBcRDovetail_8910:HG3_Ill_svaba_22558:HG3_Ill_scalpel_17237:HG3_Ill_SVrefine2DISCOVARDovetail_12879:HG3_Ill_Krunchall_23752:HG3_Ill_GATKHCSBGrefine_11777:HG3_Ill_250bpfermikitraw_23166:HG3_Ill_150bpfermikitraw_22491:HG2_PB_assemblyticsfalcon_12689:HG2_PB_SVrefine2PBcRplusDovetail_5298:HG2_PB_SVrefine2PB10Xhap12_13305:HG2_Ill_svaba_22332:HG2_Ill_scalpel_16881:HG2_Ill_manta_4839:HG2_Ill_SpiralSDKrefine_7972:HG2_Ill_SVrefine2DISCOVARplusDovetail_6158:HG2_Ill_GATKHCSBGrefine_11904:HG2_Ill_250bpfermikitraw_23840:HG2_Ill_150bpfermikitraw_22476:HG2_10X_SVrefine210Xhap12_12702:HG4_Ill_Spiral_1397:HG3_Ill_Spiral_18426;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12702:HG2_Ill_150bpfermikitraw_22476:HG2_Ill_250bpfermikitraw_23840:HG2_Ill_GATKHCSBGrefine_11904:HG2_Ill_SVrefine2DISCOVARplusDovetail_6158:HG2_Ill_SpiralSDKrefine_7972:HG2_Ill_manta_4839:HG2_Ill_scalpel_16881:HG2_Ill_svaba_22332:HG2_PB_SVrefine2PB10Xhap12_13305:HG2_PB_SVrefine2PBcRplusDovetail_5298:HG2_PB_assemblyticsfalcon_12689:HG3_Ill_150bpfermikitraw_22491:HG3_Ill_250bpfermikitraw_23166:HG3_Ill_GATKHCSBGrefine_11777:HG3_Ill_Krunchall_23752:HG3_Ill_SVrefine2DISCOVARDovetail_12879:HG3_Ill_scalpel_17237:HG3_Ill_svaba_22558:HG3_PB_SVrefine2PBcRDovetail_8910:HG4_Ill_150bpfermikitraw_22603:HG4_Ill_250bpfermikitraw_23489:HG4_Ill_GATKHCSBGrefine_12294:HG4_Ill_Krunchall_24526:HG4_Ill_SVrefine2DISCOVARDovetail_12668:HG4_Ill_scalpel_16510:HG4_Ill_svaba_22308:HG4_PB_HySA_26405:HG4_PB_SVrefine2Falcon1Dovetail_11325:HG4_PB_SVrefine2PBcRDovetail_9138;NumExactMatchSVs=30;ClusterMaxShiftDist=0.0555556;ClusterMaxSizeDiff=0.0555556;ClusterMaxEditDist=0.056338;PBcalls=13;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-72;DistBack=-73;DistForward=-1;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6665;REFWIDENED=19:50371959-50388424;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1789.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:71:1/1:2:12:0:10:./.:0:11:0:5:1/1:0:46:./.:.:.:2182339:.:.
chr19	50898396	HG2_PB_SVrefine2Falcon2Bionano_8955	AGCTGGGTACAGGTACTTTTTAAAAACTTCTTTCTCTGACAATTTCAAATTAACAGGAAGGTTGAAAGAATAAATAGTGTAGGCCGGGCGCGGTG	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_12718:HG3_PB_HySA_27339:HG3_PB_pbsv_17916:HG2_PB_pbsv_18240:HG3_PB_SVrefine2PBcRDovetail_8916:HG3_PB_SVrefine2Falcon1Dovetail_11310:HG3_10X_allpass_3426:HG2_PB_SVrefine2Falcon2Bionano_8955:HG2_Ill_GATKHCSBGrefine_11906;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11906:HG2_PB_SVrefine2Falcon2Bionano_8955:HG3_10X_allpass_3426:HG3_PB_SVrefine2Falcon1Dovetail_11310:HG3_PB_SVrefine2PBcRDovetail_8916;NumExactMatchSVs=5;ClusterMaxShiftDist=0.031746;ClusterMaxSizeDiff=0.031746;ClusterMaxEditDist=0.0320856;PBcalls=7;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-94;DistBack=6333;DistForward=-6;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=97;REFWIDENED=19:50898397-50898587;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1791.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:21:0|1:27:0:1:21:./.:0:3:15:0:0/1:25:7:./.:.:.:.:.:.
chr19	51077889	HG2_PB_SVrefine2Falcon2Bionano_8957	CCTGCAGCAATGAATGAGTTCTTGCTCTATTAGTTCACTGAGGTCTAGTTGTTAAAAAGGGCCTGGCGCCTCCCTCCTCACTGTCTTTTTTGCTCCTTCTCTCACCATGTGACATACCAGCTTCCCCTCGCCTTTCACCCTCTTCTATGATTGAAAGCTTCCTGGCTGGGTGCAGTGGTTCACGCCTGTAATCCCAGCACTTTGGGAGGCGGAGGTGGGAGGATCGCCTGAGGTCAGGAGCTGGAGACCAGCCTGGCCAACATGGCAAAATCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCGTGGTGGCATGCACCGGTAGTTCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGATGACAGAGCAAGACTCCGTCTTGGGAAAAAACAAAAACAAAAACAGAGCATCACTTACGACGTTTTCTTGCCAAGAGCATTTAAAGTAAATCTAATTAAGCCCCAAGACCTATGGTTCCCAAACTAGATGCCAAGACACCCTGGGGGGACTACAGCAAATTCATAGCAGGCCACAGCAGTGCCATGCAGGTAAACGTTTACCAGCCGGTTCTCAACATTCGCTAGAGAAGAGTCGTATTTTTTTTGCTTCTGTTTGCAAAGCCACCATTCGCTGGCTCCAGCACACAACTGGTTACAGCATCTTTAAATTTTTCAAGTGAAACACAGTGATAGTTGACATCTCTCAGACACCACCATGACCTCATGGCTTGGGACAGTCCACAGTTTCAACATTAGATTATGCTACATTTGGGGGATGATATTATCTCTGTAAAGCTGAGTTTTTGGCAGTTCCATGATTAAAAGCAACCACTACCTGTTTGTGGAACAGGAAAGGAGGGTGGTAGTGTCCAATCTGATTCCAAAGTGTGATAGGTTGTACAGTGCCCAACAGGTGCGTATACCCTTTTAGTAAGTAATCAGTGCCCTTTAAGACTGAAATAAAGGCCGGGCACGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCAAGGGGGGCAGATCATTTGAGACCAGGAGTTCGAGACAAGCCTGGCCAACATGGCAAAACCCGTTGGTGAAACCCCGTCTCTACTAAAAATACAAAAAGTAGCCAGGCGTGGTGGCGCACGCCTGCAGCCTCAGCTACTCTGGTGCCTGAAGCAGGAGGATCACTTGGACCCCAGAGGCGGAGGTTACAGTGAGCCGAGATTGCACCACTGCACTCCAGGCTGGGTGACAAAGCAAGACTCTGTATCAATTAAAAAAAAAAAAGGATGAAATACAATATTTTTTCTTTCAATTTGTGTGCATTACTTTTTCAACTGGTGCTAAGTTGCTAGAACATAATACTTCTTAAGTTGTGTGAACATAACTGCTTAATAACGGCCACCACGTATTTCTTTTTGGGTCAGGGACACCATGAGAAAATGACTGAGGTGCTGTGAACTGAGAATGTGGGGGATCCTCTGCACGAGCTCTCTTGTCCATCTACAGGAATTAGGAGAGAGAAACAAGCTGGAAGACACTGCGAAGGAACAATCAGGCAAATCTAGAATGTGGGGCATTCTAGGAGACAACCAGCCTGGTCCCTCCAAAAAGTCCCCATGATGGGGCAGAGAAACTGGCTGGAGTGGTTGCTCTAAGTTAAAATAGATTAAGGAGATACAACCACCACATGCAGTGCTTGAGCCTTGCTTGGATCCTGGTTTGCAACATTTCTTTTTTCTTTTTTTTTTTTTTTGGGAGTGGGGGTCTCACTTTTTTGCTTAAGCTGGAGTGCAGTGGCACAATCATAGCTCACTGCAGCCTCCAACTCCTGGGCTTAAGTGAGCCTCCTGCCACAGCCTTCTGAGTAGCGGGGATTACAGGCAGGTGCCACCACACCTGGCTAATTTTTTGTTGTTGTTGAGATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCTCCACCTTCCAGGCTCAATCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGAAACTGCAGGCGCACACCACTATGCCTGGGTAATTTTTTTTCTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGGTCAGGCTGGTCCCAAACTCCTGACCTCAAGTGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGTGATTACAAGTGGCAGCTACTGCACCTGGCTAATTTTTAAACCTTTTTTTTTTTTTTTAGAGATGGGGTCTTGCTATGTTGCCCAGGCTGGTCTTCAACTCCTGGCCTCACGTGATCCTCCTGCCTTGGCCTCTCAAAGCACTAGGATTATAGATGTGGGCCACTGTGCCCAGCCCATAGTATGTTTTAAAAGTCCTAAAATACAATGTCTGGACAAGTGGGATAATGTGAATTTGGACTCGATCTTAGAAGCACTAGGGAATTAAGTTTACTCTTCTTGGGTGTGATATGATATAATATTGTAGTTATGTAGGAGAATGTTCTTATTCTTTTCTTTCTTTTTTTTTTTTTTATTTTTGTTTTTGAGACAAGGTCTCACTCTGTTGCCCAGGCCGGAGGGCAGTGGCACAGTCTTGGCTTGGTGTAACCTCTGCCTCCCAGGTTCAAGCCATCTTCTCTTTTCAGCCTCCTGGGTAGCTGGGACTACAGGTGTGCACCACCATGGCTGGCTAATTTTTGTATTTTTTGTAGAGTTTCATCATGTTTCTCTACATTGCCCAGGCTGGTCTTGAACTCCTGGCCACAAGCGATCTGCCTGTCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGTCTGGCCTAGAATGTTCTTATCTTAGGAGATTCGTATGGAAGCATTTGCGTCTGCAACCTCTTCTCAAATCATTCAGCATCTCAAATATTAACAACGATGGAATCAAAGCGGTGGGCATATGGATGCTCAATGTTTTTTCAACTTTCTGGATATATGACATTTCTCATAAAAAATTTGGGGGAGATTCATCTGAGAGAAGTCACATTTAGGGCAGGTTGTTGCTTGCAATTAACCACTCCCCTCCTGCATAAACGCTTTTCCCTGTCTGCACCAGCATTTAAGATTTCCCCAGTATCTCCCATCTTAAAGAGGAACCACCCCATCATGCCCTCCTCTGACACGTCTCCCTGCAGTGACCGCCCACTTCTCTTGTTCTTCTCAGCAAAACTTCACAAAAGCTACCTCTCCTTCTTCATCTCATAGTCCCTCTGCAAACACCAGCTGGGCTTCTGCATCCCACTTCCGACCAAGCTGTCCTTGTCCAAGGCCACCAATGGCCTCCGTACTGCACACTCAATGGCCACTTCTCTACCCGCATCCCAGTCTTCCACTTGGCAGCACTGGCCACAGAACCTCCTGGAAACCAATGTCTTTTCATGGCTTCAGTGACTTCAAACCCTCCCTCACTTTCCTCCTCTTTCACCTGGCTGAGCCTTCTGGGACTTGTCTGCCAGTTCCCCTCCTTTGCTTGCTCCCTAAATGTGGGAGGAAAGCCACTGGATCCCAGCCCTCTTTGTGCTCTGTTCTCTACCCCTAGGTGACCCAGTTCTGTGGCTTTAAACCCAGACAGCCGGGCCGGGCGTAGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCAGATCACTTGAGGCCAGGAGTTCGAGACCAGCCTGACCAACATGGTGAAACCCTTTCTCTAATAACAATACAAAAATTAGCCGGGTGTGGTGGTGGGCGCCTGTAATCTCAGCTACTCGGGAGGCTGAGGCGGGAGGATCACGTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACCCTGTCTCAGAAAACGAAACAAACCAAACAAACAAAAAATCCAGGCAGCTGATGACTCCCCAGTATGGGTGTCCAACTCTGAACTCTGCGCCGAGCTCCTCCTGCAGGTATACAAATGGCTCCTTGACATCTCTTCTTAAATGTAGCGGCCAAAGTTGGGCTCCTGACTCCCGGCCCCTGCCCACACACACTTGCTTTGCTTCCAGTCTTCCTTATCTCAGTAAACTGTACCATCCTCCACTCAGCTGTTGACTTCAAGACGTAGAAATTGTTCTCGATGGCACTCTTTTCTCACTCCCTCTGTCCAGTCCATCATCCAGTGACTCTACCTTTAAAATACATTTCCAAGTATCCCTTCTTTTCATCCCTTCTGGCACCACGGTAGCAAAAGCCACCATCCTCTCTCCCATGGCCGACTGAAGGCCTCCTCCCTGGCCTTACTGCTTTTTTTAATTGTTGTTGTTTTTGTTTTTTTGAGATGGAGTCTCACTCTGTCGCTCAGGCTGGAATGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCATCTCCTGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCTGCCACCACGCCCGGCTAACTTTTGTATTTTTAGTAGAGGCGGAGTTTCACCATATTGGTCAGGCTGGTCTTGAA	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_1918:HG3_10X_allpass_3427:HG2_10X_allpass_2788:HG3_PB_assemblyticsfalcon_12724:HG4_PB_pbsv_18163:HG4_PB_SVrefine2PBcRDovetail_9143:HG4_PB_SVrefine2Falcon1Dovetail_11327:HG4_Ill_SVrefine2DISCOVARDovetail_12673:HG4_Ill_MetaSV_2434:HG3_PB_pbsv_17920:HG3_PB_SVrefine2PBcRDovetail_8919:HG3_PB_SVrefine2Falcon1Dovetail_11312:HG3_Ill_SVrefine2DISCOVARDovetail_12883:HG3_Ill_MetaSV_2504:HG2_PB_pbsv_18243:HG2_PB_assemblyticsfalcon_12698:HG2_PB_SVrefine2PBcRplusDovetail_5301:HG2_PB_SVrefine2PB10Xhap12_13310:HG2_PB_SVrefine2Falcon2Bionano_8957:HG2_PB_SVrefine2Falcon1plusDovetail_5756:HG2_Ill_SpiralSDKrefine_7984:HG2_Ill_SVrefine2DISCOVARplusDovetail_6163:HG2_Ill_MetaSV_2356:HG2_10X_SVrefine210Xhap12_12708:HG2_PB_HySA_33087;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12708:HG2_Ill_MetaSV_2356:HG2_Ill_SVrefine2DISCOVARplusDovetail_6163:HG2_Ill_SpiralSDKrefine_7984:HG2_PB_SVrefine2Falcon1plusDovetail_5756:HG2_PB_SVrefine2Falcon2Bionano_8957:HG2_PB_SVrefine2PB10Xhap12_13310:HG2_PB_SVrefine2PBcRplusDovetail_5301:HG2_PB_assemblyticsfalcon_12698:HG2_PB_pbsv_18243:HG3_Ill_MetaSV_2504:HG3_Ill_SVrefine2DISCOVARDovetail_12883:HG3_PB_SVrefine2Falcon1Dovetail_11312:HG3_PB_SVrefine2PBcRDovetail_8919:HG3_PB_pbsv_17920:HG4_Ill_MetaSV_2434:HG4_Ill_SVrefine2DISCOVARDovetail_12673:HG4_PB_SVrefine2Falcon1Dovetail_11327:HG4_PB_SVrefine2PBcRDovetail_9143:HG4_PB_pbsv_18163;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00129842;ClusterMaxSizeDiff=0.00129842;ClusterMaxEditDist=0.00129842;PBcalls=14;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=12;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-4622;DistBack=24167;DistForward=-4622;DistMin=-4622;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=19:51077890-51082513;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1792.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:31:0|1:26:1:2:15:1|0:0:44:57:0:0/1:61:17:0/1:323:161:6424:.:.
chr19	51128990	HG4_Ill_svaba_22323	CGACCCAGGAGTCCAGGCCCCTGGCCCCTCCTCCCTCAGACCCAGGAGTCCAGATCCCCAGCTCCTCCTCCCTCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12710:HG3_PB_assemblyticsfalcon_12728:HG4_PB_HySA_26417:HG4_PB_pbsv_18165:HG2_PB_pbsv_18245:HG3_PB_pbsv_17923:HG2_PB_HySA_33089:HG4_PB_assemblyticsfalcon_12518:HG4_Ill_svaba_22323:HG4_Ill_scalpel_16519:HG4_Ill_Krunchall_24539:HG4_Ill_GATKHC_28638:HG4_Ill_GATKHCSBGrefine_12299:HG4_Ill_250bpfermikitraw_23496:HG4_Ill_150bpfermikitraw_22614:HG3_Ill_svaba_22570:HG3_Ill_scalpel_17244:HG3_Ill_Krunchall_23766:HG3_Ill_250bpfermikitraw_23178:HG3_Ill_150bpfermikitraw_22503:HG2_Ill_svaba_22350:HG2_Ill_scalpel_16892:HG2_Ill_SpiralSDKrefine_7985:HG2_Ill_Krunchall_24201:HG2_Ill_GATKHC_28647:HG2_Ill_GATKHCSBGrefine_11910:HG2_Ill_250bpfermikitraw_23855:HG2_Ill_150bpfermikitraw_22492:HG4_PB_SVrefine2PBcRDovetail_9146:HG4_Ill_SVrefine2DISCOVARDovetail_12676:HG3_PB_SVrefine2PBcRDovetail_8922:HG3_Ill_SVrefine2DISCOVARDovetail_12884:HG2_PB_SVrefine2PBcRplusDovetail_5302:HG2_PB_SVrefine2PB10Xhap12_13311:HG2_Ill_SVrefine2DISCOVARplusDovetail_6164;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22492:HG2_Ill_250bpfermikitraw_23855:HG2_Ill_GATKHCSBGrefine_11910:HG2_Ill_GATKHC_28647:HG2_Ill_Krunchall_24201:HG2_Ill_SpiralSDKrefine_7985:HG2_Ill_scalpel_16892:HG2_Ill_svaba_22350:HG3_Ill_150bpfermikitraw_22503:HG3_Ill_250bpfermikitraw_23178:HG3_Ill_Krunchall_23766:HG3_Ill_scalpel_17244:HG3_Ill_svaba_22570:HG4_Ill_150bpfermikitraw_22614:HG4_Ill_250bpfermikitraw_23496:HG4_Ill_GATKHCSBGrefine_12299:HG4_Ill_GATKHC_28638:HG4_Ill_Krunchall_24539:HG4_Ill_scalpel_16519:HG4_Ill_svaba_22323:HG4_PB_assemblyticsfalcon_12518;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0266667;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.189189;PBcalls=11;Illcalls=23;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=20;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-74;DistBack=2098;DistForward=7;DistMin=7;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=144;REFWIDENED=19:51128929-51129146;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1793.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:54:1/1:1:9:2:14:1/1:0:10:0:11:1/1:0:39:./.:.:.:.:.:.
chr19	51203247	HG3_Ill_GATKHCSBGrefine_11782	ATCGGGGCATTGGAGGGTTGGAAGGCTCGGGGCATTGGAGGATTGGAGGGC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_17927:HG2_Ill_GATKHCSBGrefine_11911:HG3_PB_HySA_27350:HG3_PB_assemblyticsfalcon_12731:HG4_Ill_GATKHC_28641:HG4_Ill_GATKHCSBGrefine_12300:HG3_Ill_GATKHC_28549:HG3_Ill_GATKHCSBGrefine_11782;NumClusterSVs=8;ExactMatchIDs=HG3_Ill_GATKHCSBGrefine_11782:HG3_Ill_GATKHC_28549:HG4_Ill_GATKHCSBGrefine_12300:HG4_Ill_GATKHC_28641;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.0392157;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=5;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=147;DistForward=-6;DistMin=-6;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=27;REFWIDENED=19:51203246-51203325;PctSeqSimilarity=0.9936;PctSizeSimilarity=1;PctRecOverlap=0.451;SizeDiff=0;StartDistance=-28;EndDistance=-28;GTMatch=0;TruScore=81;MatchId=1794.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:23:./.:19:9:2:7:./.:3:5:25:5:./.:2:0:./.:.:.:.:.:.
chr19	51406755	HG3_10X_allpass_3428	AGAGTAGCTGGGATTACAGGCACATGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACCTCGGCCTACCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCCGGCCAGCTCTTTTTCTTCTATAATTATGTGCTTATGGCTGCATGTTTCTCTCCGAGCACTGTAGTAGGCATACGCAATACATGTGTATACATCTGGTATTTTCCTTAGCATTTAATTCCAAATATTTTCTAATTTCCATTATATCTCTTGTTTGAACTCTGGGTTCTTTAGAGGTGTTCTTTTAAAATCAAAACGCACAGTCCTAGATGAGATAACTCAGAAACAGCCAGTCAAATACCACATGTTCTGTCTTATAAATGGGAGCTAAACAGTGGGTACAGACAGGCATAGAGTGAAATAATAGACACTGGAGACTCCGAAAGGTGGAAGCATGAGAGGGGGTGAGGCGAAGGAGGAAAATGACCTGTTGGGCACAGTGCACACTACTTGGGTGATGGGTACAGTAAAAAGCCCAGAGTTCACCACCACACAACATATCCCTGTAAGAAACCTGCACTTGCGGGCGGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGAGGATCGCCTGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACCAAAAATACAAAAAATTAGCCGGGCGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGCGAGGCTGAGGCAGGAGAATGGCGTAAACCCGGGGGGCGGAGCCTGCAGTGAGCGGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCCAGAGCGCGACTCCGCCTCAAAAACAAAAAACAAAAAAGTGCACTTGCACTCCCTAAGACCATTTTGAAAACACATGAGGATTTTCTGGTTATCATGATTTCTAGCTTAATTACATTGTGGTCAGACAACATACTCTATATATTCCAACTTGGAAATTTGTTGAGACTTGCTTCGTACCTCAGTAACAGGTTCACTTTTGTAAATGCTATGTGTGGTTTTTAAATTGAGGTAAAGTTTTTATTGAGGTATGCACAGTGTGGCGTTAGAGTTCAATGAGTTTTGGCAAATGCATACTCATGTAATCCTCACTCCTGTAAAGTTATGGAAAATTCCCATCACCCGAGAACGTTCTTTTACCCTTATTCCCAGTCTGTTTTTTTTTTTTTTACTTTTATTTTTGAGATGGAGTCTCACTCTTTTGCCCAGACTGCTGTGCAGTGGTGTGATCTCGGCTCACTGCAGCCTCTGCCTCCTGGGTTCAAGCAAGTCTCCCACCTCAGCCTCCAGAGTAGCTGGAATTACAGGCCCCCACCAACACACCCATCTAATTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCCTGGCTCGAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGATTCAGCCTCCT	A	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_12681:HG4_PB_assemblyticsfalcon_12528:HG2_PB_assemblyticsfalcon_12708:HG2_10X_allpass_2789:HG2_Ill_Krunchall_24206:HG2_PB_HySA_33102:HG3_PB_HySA_27356:HG4_Ill_MetaSV_2437:HG4_10X_allpass_3283:HG3_PB_SVrefine2Falcon1Dovetail_11319:HG3_Ill_MetaSV_2506:HG3_10X_allpass_3428:HG2_PB_pbsv_18251:HG2_Ill_SpiralSDKrefine_7991:HG2_Ill_SVrefine2DISCOVARplusDovetail_6170:HG2_Ill_GATKHCSBGrefine_11914:HG2_Ill_MetaSV_2358:HG3_PB_pbsv_17931:HG4_PB_SVrefine2Falcon1Dovetail_11335:HG3_PB_SVrefine2PBcRDovetail_8926:HG2_PB_SVrefine2PBcRplusDovetail_5306:HG2_PB_SVrefine2PB10Xhap12_13318:HG2_PB_SVrefine2Falcon2Bionano_8964:HG2_PB_SVrefine2Falcon1plusDovetail_5763:HG2_Ill_SVrefine2DISCOVARplusDovetail_6169:HG2_10X_SVrefine210Xhap12_12715;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11914:HG2_Ill_SVrefine2DISCOVARplusDovetail_6170:HG2_Ill_SpiralSDKrefine_7991:HG2_PB_pbsv_18251:HG3_10X_allpass_3428:HG3_Ill_MetaSV_2506:HG3_PB_SVrefine2Falcon1Dovetail_11319:HG4_10X_allpass_3283:HG4_Ill_MetaSV_2437;NumExactMatchSVs=9;ClusterMaxShiftDist=0.13855;ClusterMaxSizeDiff=0.13855;ClusterMaxEditDist=0.13855;PBcalls=13;Illcalls=9;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1576;DistBack=406;DistForward=-1474;DistMin=-1474;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=229;REFWIDENED=19:51406631-51408435;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1795.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:64:1/1:1:17:1:16:1/1:0:30:0:22:1/1:0:51:1/1:3:91:1188:.:.
chr19	51464184	HG2_Ill_SVrefine2DISCOVARplusDovetail_6172	GCTAATTTTTGTATTTTTAGTAGAGATGAGGTTTCCCCATATCGGCCAGGCTGGTCTCAATCTCTTGACCTGGTTATTCACCCACCTCGGCCTCCCAAGGTGCTGGGATTACAGGCATGAGCCACTGTGCCCATC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6172:HG2_PB_pbsv_18256:HG2_10X_SVrefine210Xhap12_12717:HG4_PB_pbsv_18176:HG4_Ill_250bpfermikitraw_23503:HG4_Ill_SVrefine2DISCOVARDovetail_12684:HG2_PB_SVrefine2PB10Xhap12_13322;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6172:HG4_Ill_SVrefine2DISCOVARDovetail_12684:HG2_PB_SVrefine2PB10Xhap12_13322;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0763359;ClusterMaxSizeDiff=0.0757576;ClusterMaxEditDist=0.221374;PBcalls=3;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-134;DistBack=841;DistForward=-50;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=400;REFWIDENED=19:51464185-51464718;PctSeqSimilarity=0.8908;PctSizeSimilarity=0.9853;PctRecOverlap=0.365;SizeDiff=-2;StartDistance=-85;EndDistance=-87;GTMatch=0;TruScore=74;MatchId=1797.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:12:1|0:2:11:13:0:./.:3:0:8:0:0/0:48:0:./.:.:.:.:.:.
chr19	51684146	HG2_Ill_250bpfermikitraw_23870	ATGTGTGTGTATACATATATATGTACATAGTATATGTGTGTGTATACATATATATGTACATAGTATATG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_17940:HG4_PB_assemblyticsfalcon_12536:HG3_Ill_GATKHC_28566:HG2_Ill_GATKHC_28664:HG2_Ill_250bpfermikitraw_23870:HG2_Ill_150bpfermikitraw_22504:HG2_PB_pbsv_18258;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22504:HG2_Ill_250bpfermikitraw_23870:HG2_Ill_GATKHC_28664:HG3_Ill_GATKHC_28566;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0597015;ClusterMaxSizeDiff=0.0597015;ClusterMaxEditDist=0.0597015;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-68;DistBack=-172;DistForward=27;DistMin=-172;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=223;REFWIDENED=19:51684087-51684377;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1798.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:45:0|1:35:5:1:36:./.:1:17:8:1:0/1:25:30:./.:.:.:.:.:.
chr19	51776390	HG3_Ill_MetaSV_2507	TAAGAATTACCACAACTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12719:HG3_Ill_GATKHCSBGrefine_11786:HG2_Ill_GATKHCSBGrefine_11917:HG2_10X_allpass_2791:HG2_Ill_breakscan11_2608:HG4_PB_assemblyticsfalcon_12537:HG4_PB_SVrefine2Falcon1Dovetail_11340:HG3_Ill_manta_3958:HG2_Ill_manta_4842:HG2_Ill_MetaSV_2360:HG3_Ill_Spiral_18444:HG2_Ill_Spiral_1176:HG2_PB_assemblyticsfalcon_12716:HG3_PB_assemblyticsfalcon_12745:HG3_Ill_Krunchall_23778:HG2_Ill_Krunchall_24213:HG2_PB_pbsv_18259:HG3_PB_pbsv_17941:HG3_PB_SVrefine2PBcRDovetail_8932:HG3_Ill_MetaSV_2507:HG3_10X_allpass_3430:HG2_PB_SVrefine2PB10Xhap12_13325:HG2_PB_SVrefine2Falcon1plusDovetail_5767:HG2_Ill_MetaSV_2359;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12719:HG3_PB_SVrefine2PBcRDovetail_8932:HG3_Ill_MetaSV_2507:HG3_10X_allpass_3430:HG2_PB_SVrefine2PB10Xhap12_13325:HG2_PB_SVrefine2Falcon1plusDovetail_5767:HG2_Ill_MetaSV_2359;NumExactMatchSVs=7;ClusterMaxShiftDist=0.157051;ClusterMaxSizeDiff=0.157051;ClusterMaxEditDist=0.157051;PBcalls=9;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-311;DistBack=-45;DistForward=-301;DistMin=-301;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=19:51776391-51776718;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1799.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:30:0|1:39:0:0:27:1|0:0:12:31:0:0/1:38:26:0/1:31:8:.:.:.
chr19	51857006	HG3_Ill_GATKHC_28568	CCAGACTTCCAGCCTCCTCCTCCCTCAGACCCAGGAGTCCAGGTCCCAGCCCCTCCTTCCTCAGACCCAGGAGTCCAGGGCCCCATCCCCTCCTTCCTCAGACCCAGGA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_18182:HG4_PB_SVrefine2PBcRDovetail_9154:HG4_PB_SVrefine2Falcon1Dovetail_11343:HG4_Ill_GATKHC_28656:HG3_Ill_GATKHC_28568:HG3_Ill_GATKHCSBGrefine_11787:HG2_Ill_GATKHC_28667;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_28667:HG3_Ill_GATKHCSBGrefine_11787:HG3_Ill_GATKHC_28568:HG4_Ill_GATKHC_28656;NumExactMatchSVs=4;ClusterMaxShiftDist=0.044843;ClusterMaxSizeDiff=0.044843;ClusterMaxEditDist=0.346667;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-108;DistBack=-46;DistForward=26;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=683;REFWIDENED=19:51856589-51857379;PctSeqSimilarity=0.9091;PctSizeSimilarity=0.9643;PctRecOverlap=0.115;SizeDiff=-4;StartDistance=100;EndDistance=96;GTMatch=0;TruScore=66;MatchId=1801.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:17:./.:15:7:15:6:./.:3:0:3:1:./.:0:0:./.:.:.:.:.:.
chr19	52175929	HG2_PB_SVrefine2PB10Xhap12_13328	TTAATTTTCTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGAACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCACAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCACCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCA	T	20	PASS	ClusterIDs=HG2_Ill_tnscope_1919:HG4_PB_assemblyticsfalcon_12544:HG4_Ill_Krunchall_24555:HG2_Ill_Krunchall_24222:HG4_PB_pbsv_18186:HG4_PB_SVrefine2PBcRDovetail_9156:HG4_PB_SVrefine2Falcon1Dovetail_11345:HG4_Ill_SVrefine2DISCOVARDovetail_12685:HG4_Ill_MetaSV_2439:HG4_Ill_GATKHCSBGrefine_12307:HG4_10X_allpass_3286:HG3_PB_SVrefine2Falcon1Dovetail_11325:HG2_PB_pbsv_18264:HG2_PB_assemblyticsfalcon_12725:HG2_PB_SVrefine2PB10Xhap12_13328:HG2_PB_SVrefine2Falcon2Bionano_8969:HG2_PB_SVrefine2Falcon1plusDovetail_5769:HG2_Ill_breakscan11_2610:HG2_Ill_SVrefine2DISCOVARplusDovetail_6179:HG2_Ill_MetaSV_2361:HG2_Ill_GATKHCSBGrefine_11920:HG2_10X_allpass_2792:HG2_10X_SVrefine210Xhap12_12720;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12720:HG2_10X_allpass_2792:HG2_Ill_GATKHCSBGrefine_11920:HG2_Ill_MetaSV_2361:HG2_Ill_SVrefine2DISCOVARplusDovetail_6179:HG2_Ill_breakscan11_2610:HG2_PB_SVrefine2Falcon1plusDovetail_5769:HG2_PB_SVrefine2Falcon2Bionano_8969:HG2_PB_SVrefine2PB10Xhap12_13328:HG2_PB_assemblyticsfalcon_12725:HG2_PB_pbsv_18264:HG3_PB_SVrefine2Falcon1Dovetail_11325:HG4_10X_allpass_3286:HG4_Ill_GATKHCSBGrefine_12307:HG4_Ill_MetaSV_2439:HG4_Ill_SVrefine2DISCOVARDovetail_12685:HG4_PB_SVrefine2Falcon1Dovetail_11345:HG4_PB_SVrefine2PBcRDovetail_9156:HG4_PB_pbsv_18186;NumExactMatchSVs=19;ClusterMaxShiftDist=0.00948467;ClusterMaxSizeDiff=0.00948467;ClusterMaxEditDist=0.00948467;PBcalls=10;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1584;DistBack=6073;DistForward=-1576;DistMin=-1576;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=19:52175930-52177521;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1802.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:53:50:0|1:50:0:0:33:0|1:42:0:0:19:0/1:39:22:0/1:102:52:1635:.:.
chr19	52479282	HG2_PB_SVrefine2PBcRplusDovetail_5310	TCCCTGGCGCCGTTATCTACTGCGACATCTAGAGAATGCAGTCTTGCAAGACTACTCTGGAC	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23880:HG3_PB_assemblyticsfalcon_12753:HG4_PB_pbsv_18188:HG2_PB_pbsv_18266:HG2_PB_HySA_33133:HG3_PB_pbsv_17946:HG4_Ill_GATKHC_28666:HG4_Ill_GATKHCSBGrefine_12310:HG2_Ill_GATKHC_28678:HG2_Ill_GATKHCSBGrefine_11923:HG4_Ill_Spiral_1399:HG2_Ill_Spiral_1177:HG4_PB_SVrefine2Falcon1Dovetail_11347:HG4_Ill_SVrefine2DISCOVARDovetail_12686:HG4_Ill_Krunchall_24557:HG4_Ill_250bpfermikitraw_23511:HG3_Ill_250bpfermikitraw_23201:HG2_PB_assemblyticsfalcon_12727:HG2_PB_SVrefine2PBcRplusDovetail_5310:HG2_PB_SVrefine2PB10Xhap12_13329:HG2_PB_SVrefine2Falcon2Bionano_8970:HG2_Ill_svaba_22372:HG2_Ill_SVrefine2DISCOVARplusDovetail_6181:HG2_Ill_Krunchall_24225;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23880:HG4_PB_SVrefine2Falcon1Dovetail_11347:HG4_Ill_SVrefine2DISCOVARDovetail_12686:HG4_Ill_Krunchall_24557:HG4_Ill_250bpfermikitraw_23511:HG3_Ill_250bpfermikitraw_23201:HG2_PB_assemblyticsfalcon_12727:HG2_PB_SVrefine2PBcRplusDovetail_5310:HG2_PB_SVrefine2PB10Xhap12_13329:HG2_PB_SVrefine2Falcon2Bionano_8970:HG2_Ill_svaba_22372:HG2_Ill_SVrefine2DISCOVARplusDovetail_6181:HG2_Ill_Krunchall_24225;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0645161;ClusterMaxSizeDiff=0.0645161;ClusterMaxEditDist=0.0666667;PBcalls=10;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=3;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-61;DistBack=0;DistForward=102959;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=123;REFWIDENED=19:52479283-52479466;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1803.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:62:1/1:4:28:2:27:./.:0:3:0:4:1/1:0:21:./.:.:.:.:.:.
chr19	52888817	HG2_PB_SVrefine2Falcon2Bionano_8971	TGCTGAGGCTATTATTCAAGGACCATTACTATGGAACATGATAAGATTTACACAAGCGATAATTCAGTCTCTAGTTCTCCAATATTTATGATACTGCATGCTGCAGAAAAGTCACAGCTCCAAATACGTTGAATCTCATGACGCGATGCATGTCGAAGGTCCAAGGGCATGTGGAAATGGTCAGTTATATTCAGGCAATTAAAAAACCTAATTATATGGGGTTTTTTGAAAAGGCTACTTTACATTTTATGACTTTCATCCTCAACTCTGAAATCACTTCATGTGACTTCTTTACAGACCTTTCACTGTGGTCTCTTGAATCAGTAGGATGCTGGGCGCGGTGGCTCCCGCCTGTAATCTCAGTACTTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTTAGGAGATCAAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGCAGACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGACAATGGTGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCTATCACGCCACTGCACTCCAGCCTGGGGGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAGCAGTATGATGACAGGGATGACTTCATTAGCTGAGAATCATTTCTATCAGTTTGCCGAGGAAGAAGGACACTGCGTTTTCTTATTATTGTCTGATTTAGAGAGCATGGAGGTGGGGAGGAATCATATAAAATGATGATGGCAGTCATCATACTGTTGCTGAGCACTTTTTTCCTGACAGAATGGCACAGTGCTTCTGTGCTCTACCAACTAGCCATGAAATAGAGCATATCTGTAGAAATCATGCAAGGGAGATGGTGGGCACTAGGACTGCATAGCAATCACTGTTTAGGCAAGAATGATTAAAAAGTAGTCATTTTTGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGTCAATATCTCCAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGAGCGTGGTGGTAGATGCTTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCGCACCATTGCACTCCAGCCTGGGTGACAAGAGCAAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAATAGTGGTCATTTTTGAAATGGAAGAGAGAACAGTTGATTAGAGAATTTAAACTACCAGTATGCCATGTTCTTGAGTAGCATTTACATTTAACTGTTGGCATAATTTCCAACTGTTTGATTTAGAATGTACATAGTTCTCATGTTTTAATTAATAAAATTTTCCTAAGTATGAATGAATCACATCATTTCTACCAATTGTTTTAGTCCCCCTTAGGAGAATATACTGCACAGTAATGCAACATTAATAGTAAATACTCTGCAATTTGGTTTTCTTTGTCTTCACACTGAGTTATGTAGCAGTGATATGTGTCTAATCACTCTAACTTTAGTGTAAAATAGGCATTTTTAAAAAATGCACCATTAAGGTTGACGCATCCAGAACAATTTTGTGTGTGTGAAATCAACATATGCACACACTTGTGGTGCATATCCTTGGGTAAGTATAATTTACACTAATCATACTTAATACTTGAGTTATTCTTTCTGTGCCACTTCAGCCTCCTACACCCTCAAAAGTCCATGAAACATTCACTGTTCATTATATTTCTACGTGCCTATTGTGTGCCAAGGAAGACTCATGGCATGCACCTTAATTTTTATGAAGCAAAAATACAAATATATGACAAATACTTTTTTTTTTTTTTGAGACAGTGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCTTCAGCTTCCCTAATAGCTGGGACTACAGGCGCACGCTGCCACGCCCAGCTAATTTTTTGTATTTTATTAGAGACGGGGTTTCACCATGTTGCCCAGGCTGTTCTCGAACTCCTGAACTCAGGCAATCTGCCTGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACTGTGCCTGGCGACAAATACTATTAAATGAAAGAAAGTATGTTAATAAGAGTGAAAATACTGTACCACAATGTCTTTTTTTTCCTAGTAGTGCATGTCTTTTTTTTTTTTCCTAGTAGTGCTCAGTGACGTAAGTGGAAAATATTAATGTTCATAAATTTTCTTTTTTTTTTTTTTTTTGAGACAGAGTCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTGAAGCAATTCTTCTGCTTCAGCCTCCCAAATAACTGTGACTACAGGCGCGCACCACCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAAGGTTTCACCATATTGGCTAGGCTGGTCTCAAACTCCTGACCTTGTGATCCACCCGCCTCGGAC	A	20	PASS	ClusterIDs=HG4_10X_allpass_3287:HG2_PB_pbsv_18267:HG2_10X_allpass_2793:HG2_Ill_tnscope_1920:HG4_PB_pbsv_18189:HG2_Ill_SpiralSDKrefine_8007:HG4_PB_SVrefine2PBcRDovetail_9157:HG2_PB_assemblyticsfalcon_12729:HG2_PB_assemblyticsPBcR_12330:HG2_PB_SVrefine2PBcRplusDovetail_5311:HG2_PB_SVrefine2PB10Xhap12_13330:HG2_PB_SVrefine2Falcon2Bionano_8971:HG2_PB_SVrefine2Falcon1plusDovetail_5770:HG2_PB_PB10Xdip_15989:HG2_Ill_SVrefine2DISCOVARplusDovetail_6182:HG4_PB_HySA_26442:HG4_Ill_MetaSV_2440:HG2_Ill_MetaSV_2362:HG2_PB_assemblyticsPBcR_12329:HG2_Ill_Krunchall_24228;NumClusterSVs=20;ExactMatchIDs=HG2_PB_assemblyticsPBcR_12329:HG2_Ill_SVrefine2DISCOVARplusDovetail_6182:HG2_PB_PB10Xdip_15989:HG2_PB_SVrefine2Falcon1plusDovetail_5770:HG2_PB_SVrefine2Falcon2Bionano_8971:HG2_PB_SVrefine2PB10Xhap12_13330:HG2_PB_SVrefine2PBcRplusDovetail_5311:HG2_PB_assemblyticsPBcR_12330:HG2_PB_assemblyticsfalcon_12729:HG4_PB_SVrefine2PBcRDovetail_9157;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00893031;ClusterMaxSizeDiff=0.00893031;ClusterMaxEditDist=0.00893031;PBcalls=12;Illcalls=6;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-2569;DistBack=0;DistForward=-2570;DistMin=-2570;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=19:52888817-52891386;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9996;PctRecOverlap=0.9992;SizeDiff=1;StartDistance=1;EndDistance=2;GTMatch=0;TruScore=99;MatchId=1804.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:56:37:0|1:42:1:6:24:0|1:68:0:0:19:0/1:45:8:0/1:203:82:2643:.:.
chr19	52948969	HG4_Ill_GATKHC_28669	AATTTACTCTTGCAGTCATTCTGGAGCAAAAATTCATGATGCAGGACTCCACACACTACTGTCCATCTGAGTGGAAGCTGCAAGTTAGTCCTGCCCTGCCATCTGCC	A	20	PASS	ClusterIDs=HG3_PB_pbsv_17947:HG4_PB_HySA_26443:HG3_PB_HySA_27381:HG4_Ill_Krunchall_24560:HG3_Ill_Krunchall_23788:HG3_PB_assemblyticsfalcon_12754:HG4_Ill_Krunchall_24559:HG2_Ill_Krunchall_24229:HG4_PB_assemblyticsfalcon_12547:HG4_PB_SVrefine2PBcRDovetail_9158:HG4_PB_SVrefine2Falcon1Dovetail_11348:HG4_Ill_svaba_22343:HG4_Ill_scalpel_16531:HG4_Ill_manta_4114:HG4_Ill_SVrefine2DISCOVARDovetail_12689:HG4_Ill_MetaSV_2441:HG4_Ill_GATKHC_28669:HG4_Ill_GATKHCSBGrefine_12311:HG4_Ill_250bpfermikitraw_23513:HG4_Ill_150bpfermikitraw_22633:HG4_CG_vcfBeta_11302:HG4_10X_allpass_3288:HG3_PB_SVrefine2PBcRDovetail_8936:HG3_PB_SVrefine2Falcon1Dovetail_11327:HG3_Ill_svaba_22592:HG3_Ill_scalpel_17260:HG3_Ill_manta_3959:HG3_Ill_SVrefine2DISCOVARDovetail_12895:HG3_Ill_MetaSV_2508:HG3_Ill_GATKHC_28580:HG3_Ill_GATKHCSBGrefine_11790:HG3_Ill_250bpfermikitraw_23204:HG3_Ill_150bpfermikitraw_22525:HG3_CG_vcfBeta_9745:HG3_10X_allpass_3431:HG2_PB_pbsv_18268:HG2_PB_assemblyticsfalcon_12730:HG2_PB_assemblyticsPBcR_12331:HG2_PB_SVrefine2PBcRplusDovetail_5312:HG2_PB_SVrefine2PB10Xhap12_13331:HG2_PB_SVrefine2Falcon2Bionano_8972:HG2_PB_SVrefine2Falcon1plusDovetail_5771:HG2_Ill_svaba_22375:HG2_Ill_scalpel_16909:HG2_Ill_manta_4844:HG2_Ill_breakscan11_2613:HG2_Ill_SVrefine2DISCOVARplusDovetail_6183:HG2_Ill_MetaSV_2363:HG2_Ill_GATKHC_28681:HG2_Ill_GATKHCSBGrefine_11924:HG2_Ill_250bpfermikitraw_23883:HG2_Ill_150bpfermikitraw_22512:HG2_CG_vcfBeta_10275:HG2_10X_allpass_2794:HG2_10X_SVrefine210Xhap12_12725:HG2_PB_HySA_33134:HG4_PB_pbsv_18190;NumClusterSVs=57;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12725:HG2_10X_allpass_2794:HG2_CG_vcfBeta_10275:HG2_Ill_150bpfermikitraw_22512:HG2_Ill_250bpfermikitraw_23883:HG2_Ill_GATKHCSBGrefine_11924:HG2_Ill_GATKHC_28681:HG2_Ill_MetaSV_2363:HG2_Ill_SVrefine2DISCOVARplusDovetail_6183:HG2_Ill_breakscan11_2613:HG2_Ill_manta_4844:HG2_Ill_scalpel_16909:HG2_Ill_svaba_22375:HG2_PB_SVrefine2Falcon1plusDovetail_5771:HG2_PB_SVrefine2Falcon2Bionano_8972:HG2_PB_SVrefine2PB10Xhap12_13331:HG2_PB_SVrefine2PBcRplusDovetail_5312:HG2_PB_assemblyticsPBcR_12331:HG2_PB_assemblyticsfalcon_12730:HG2_PB_pbsv_18268:HG3_10X_allpass_3431:HG3_CG_vcfBeta_9745:HG3_Ill_150bpfermikitraw_22525:HG3_Ill_250bpfermikitraw_23204:HG3_Ill_GATKHCSBGrefine_11790:HG3_Ill_GATKHC_28580:HG3_Ill_MetaSV_2508:HG3_Ill_SVrefine2DISCOVARDovetail_12895:HG3_Ill_manta_3959:HG3_Ill_scalpel_17260:HG3_Ill_svaba_22592:HG3_PB_SVrefine2Falcon1Dovetail_11327:HG3_PB_SVrefine2PBcRDovetail_8936:HG4_10X_allpass_3288:HG4_CG_vcfBeta_11302:HG4_Ill_150bpfermikitraw_22633:HG4_Ill_250bpfermikitraw_23513:HG4_Ill_GATKHCSBGrefine_12311:HG4_Ill_GATKHC_28669:HG4_Ill_MetaSV_2441:HG4_Ill_SVrefine2DISCOVARDovetail_12689:HG4_Ill_manta_4114:HG4_Ill_scalpel_16531:HG4_Ill_svaba_22343:HG4_PB_SVrefine2Falcon1Dovetail_11348:HG4_PB_SVrefine2PBcRDovetail_9158:HG4_PB_assemblyticsfalcon_12547;NumExactMatchSVs=47;ClusterMaxShiftDist=0.0186916;ClusterMaxSizeDiff=0.0186916;ClusterMaxEditDist=0.028169;PBcalls=18;Illcalls=32;TenXcalls=4;CGcalls=3;PBexactcalls=12;Illexactcalls=28;TenXexactcalls=4;CGexactcalls=3;HG2count=22;HG3count=17;HG4count=18;NumTechs=4;NumTechsExact=4;SVLEN=-106;DistBack=6442;DistForward=2071;DistMin=2071;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=19:52948970-52949077;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1805.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:56:1/1:0:9:1:6:1/1:0:18:0:10:1/1:0:26:./.:.:.:.:.:.
chr19	53084111	HG3_Ill_manta_3960	TCATGCCTGTAATCCCAGGACTTCGGGAGGCTGAGACATGTGGATCACCTGAGGTCAGGTGTTTGAGACAAACCTGGCCAATATGGTGAAACCCCATCTCTACTAAAAATATAAAAATTAGCCGGGCATGATGGTG	T	20	PASS	ClusterIDs=HG2_PB_pbsv_18269:HG4_PB_assemblyticsfalcon_12548:HG2_PB_assemblyticsfalcon_12731:HG3_PB_HySA_27383:HG2_PB_HySA_33135:HG4_Ill_Krunchall_24561:HG3_Ill_Krunchall_23789:HG2_Ill_Krunchall_24230:HG3_PB_pbsv_17948:HG2_Ill_breakscan11_2614:HG4_PB_HySA_26444:HG4_PB_pbsv_18191:HG4_PB_SVrefine2PBcRDovetail_9159:HG4_PB_SVrefine2Falcon1Dovetail_11349:HG4_Ill_svaba_22344:HG4_Ill_scalpel_16532:HG4_Ill_SVrefine2DISCOVARDovetail_12691:HG4_Ill_MetaSV_2443:HG4_Ill_GATKHCSBGrefine_12312:HG4_Ill_250bpfermikitraw_23514:HG4_Ill_150bpfermikitraw_22634:HG4_10X_allpass_3289:HG3_PB_SVrefine2PBcRDovetail_8937:HG3_PB_SVrefine2Falcon1Dovetail_11328:HG3_Ill_svaba_22593:HG3_Ill_manta_3960:HG3_Ill_SVrefine2DISCOVARDovetail_12896:HG3_Ill_MetaSV_2509:HG3_Ill_GATKHCSBGrefine_11791:HG3_Ill_250bpfermikitraw_23205:HG3_Ill_150bpfermikitraw_22526:HG3_10X_allpass_3432:HG2_PB_SVrefine2PBcRplusDovetail_5313:HG2_PB_SVrefine2PB10Xhap12_13332:HG2_PB_SVrefine2Falcon2Bionano_8973:HG2_PB_SVrefine2Falcon1plusDovetail_5772:HG2_Ill_svaba_22376:HG2_Ill_scalpel_16910:HG2_Ill_manta_4845:HG2_Ill_SVrefine2DISCOVARplusDovetail_6185:HG2_Ill_MetaSV_2364:HG2_Ill_GATKHCSBGrefine_11925:HG2_Ill_250bpfermikitraw_23884:HG2_Ill_150bpfermikitraw_22513:HG2_10X_allpass_2795:HG2_10X_SVrefine210Xhap12_12727;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12727:HG2_10X_allpass_2795:HG2_Ill_150bpfermikitraw_22513:HG2_Ill_250bpfermikitraw_23884:HG2_Ill_GATKHCSBGrefine_11925:HG2_Ill_MetaSV_2364:HG2_Ill_SVrefine2DISCOVARplusDovetail_6185:HG2_Ill_manta_4845:HG2_Ill_scalpel_16910:HG2_Ill_svaba_22376:HG2_PB_SVrefine2Falcon1plusDovetail_5772:HG2_PB_SVrefine2Falcon2Bionano_8973:HG2_PB_SVrefine2PB10Xhap12_13332:HG2_PB_SVrefine2PBcRplusDovetail_5313:HG3_10X_allpass_3432:HG3_Ill_150bpfermikitraw_22526:HG3_Ill_250bpfermikitraw_23205:HG3_Ill_GATKHCSBGrefine_11791:HG3_Ill_MetaSV_2509:HG3_Ill_SVrefine2DISCOVARDovetail_12896:HG3_Ill_manta_3960:HG3_Ill_svaba_22593:HG3_PB_SVrefine2Falcon1Dovetail_11328:HG3_PB_SVrefine2PBcRDovetail_8937:HG4_10X_allpass_3289:HG4_Ill_150bpfermikitraw_22634:HG4_Ill_250bpfermikitraw_23514:HG4_Ill_GATKHCSBGrefine_12312:HG4_Ill_MetaSV_2443:HG4_Ill_SVrefine2DISCOVARDovetail_12691:HG4_Ill_scalpel_16532:HG4_Ill_svaba_22344:HG4_PB_SVrefine2Falcon1Dovetail_11349:HG4_PB_SVrefine2PBcRDovetail_9159;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0147601;ClusterMaxSizeDiff=0.0147059;ClusterMaxEditDist=0.0732601;PBcalls=16;Illcalls=26;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=22;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-135;DistBack=-201252;DistForward=-103;DistMin=-201252;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=34;REFWIDENED=19:53084112-53084280;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1806.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:51:1/1:0:11:1:13:1/1:0:36:0:27:1/1:1:51:./.:.:.:.:.:.
chr19	53496899	HG4_Ill_GATKHCSBGrefine_12315	GGGGCGGGGCGCGAGGCGGAGAGACCTTCCCCTATAGAACCGGCAGGGGGCGGGGCGCGAGGCGGAGAGACCTTCCCCTATAGAACCGGCAGA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6188:HG4_Ill_Krunchall_24570:HG4_Ill_GATKHC_28679:HG4_Ill_GATKHCSBGrefine_12315:HG4_Ill_250bpfermikitraw_23523:HG3_Ill_Krunchall_23797:HG3_Ill_GATKHC_28588:HG3_Ill_GATKHCSBGrefine_11793:HG3_Ill_250bpfermikitraw_23212:HG2_Ill_manta_4848:HG2_Ill_SpiralSDKrefine_8014:HG2_Ill_Krunchall_24238:HG2_Ill_GATKHC_28688:HG2_Ill_GATKHCSBGrefine_11928:HG2_Ill_250bpfermikitraw_23894:HG2_Ill_150bpfermikitraw_22521:HG2_10X_SVrefine210Xhap12_12733:HG2_PB_HySA_33142:HG2_PB_pbsv_18276:HG3_PB_HySA_27388:HG4_PB_pbsv_18196:HG2_PB_SVrefine2Falcon1plusDovetail_5775:HG2_Ill_breakscan11_2616:HG3_PB_pbsv_17955:HG4_PB_SVrefine2Falcon1Dovetail_11352:HG2_PB_SVrefine2PBcRplusDovetail_5317:HG2_PB_SVrefine2PB10Xhap12_13337:HG2_PB_SVrefine2Falcon2Bionano_8976;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12733:HG2_Ill_150bpfermikitraw_22521:HG2_Ill_250bpfermikitraw_23894:HG2_Ill_GATKHCSBGrefine_11928:HG2_Ill_GATKHC_28688:HG2_Ill_Krunchall_24238:HG2_Ill_SpiralSDKrefine_8014:HG2_Ill_manta_4848:HG3_Ill_250bpfermikitraw_23212:HG3_Ill_GATKHCSBGrefine_11793:HG3_Ill_GATKHC_28588:HG3_Ill_Krunchall_23797:HG4_Ill_250bpfermikitraw_23523:HG4_Ill_GATKHCSBGrefine_12315:HG4_Ill_GATKHC_28679:HG4_Ill_Krunchall_24570;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0320856;ClusterMaxSizeDiff=0.0320856;ClusterMaxEditDist=0.0421053;PBcalls=10;Illcalls=17;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-92;DistBack=47;DistForward=-84;DistMin=-84;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=58;REFWIDENED=19:53496852-53497001;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1807.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:48:1/1:1:12:0:10:./.:0:0:0:0:1/1:0:29:./.:.:.:35175:.:.
chr19	53616464	HG3_Ill_GATKHCSBGrefine_11794	TAAAAACCGAGGCATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCACGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_24239:HG4_Ill_Krunchall_24573:HG3_PB_assemblyticsfalcon_12761:HG4_PB_assemblyticsfalcon_12559:HG2_PB_assemblyticsfalcon_12741:HG2_PB_assemblyticsPBcR_12345:HG4_Ill_Krunchall_24574:HG4_Ill_Spiral_1401:HG3_PB_HySA_27391:HG3_Ill_Spiral_18462:HG2_Ill_Spiral_1179:HG2_PB_pbsv_18279:HG4_Ill_MetaSV_2446:HG3_Ill_MetaSV_2511:HG2_Ill_tnscope_1922:HG2_Ill_MetaSV_2365:HG4_PB_SVrefine2PBcRDovetail_9164:HG4_PB_SVrefine2Falcon1Dovetail_11353:HG4_Ill_scalpel_16541:HG4_Ill_manta_4117:HG4_Ill_SVrefine2DISCOVARDovetail_12695:HG4_Ill_GATKHCSBGrefine_12316:HG4_10X_allpass_3292:HG3_PB_SVrefine2PBcRDovetail_8941:HG3_PB_SVrefine2Falcon1Dovetail_11332:HG3_Ill_manta_3963:HG3_Ill_SVrefine2DISCOVARDovetail_12904:HG3_Ill_GATKHCSBGrefine_11794:HG3_10X_allpass_3433:HG2_PB_SVrefine2PBcRplusDovetail_5319:HG2_PB_SVrefine2PB10Xhap12_13338:HG2_PB_SVrefine2Falcon2Bionano_8978:HG2_PB_SVrefine2Falcon1plusDovetail_5776:HG2_PB_HySA_33145:HG2_Ill_scalpel_16917:HG2_Ill_manta_4849:HG2_Ill_SVrefine2DISCOVARplusDovetail_6189:HG2_Ill_GATKHCSBGrefine_11929:HG2_10X_allpass_2799:HG2_10X_SVrefine210Xhap12_12734:HG4_PB_pbsv_18199:HG3_PB_pbsv_17956:HG2_Ill_breakscan11_2617;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12734:HG2_10X_allpass_2799:HG2_Ill_GATKHCSBGrefine_11929:HG2_Ill_SVrefine2DISCOVARplusDovetail_6189:HG2_Ill_manta_4849:HG2_Ill_scalpel_16917:HG2_PB_HySA_33145:HG2_PB_SVrefine2Falcon1plusDovetail_5776:HG2_PB_SVrefine2Falcon2Bionano_8978:HG2_PB_SVrefine2PB10Xhap12_13338:HG2_PB_SVrefine2PBcRplusDovetail_5319:HG3_10X_allpass_3433:HG3_Ill_GATKHCSBGrefine_11794:HG3_Ill_SVrefine2DISCOVARDovetail_12904:HG3_Ill_manta_3963:HG3_PB_SVrefine2Falcon1Dovetail_11332:HG3_PB_SVrefine2PBcRDovetail_8941:HG4_10X_allpass_3292:HG4_Ill_GATKHCSBGrefine_12316:HG4_Ill_SVrefine2DISCOVARDovetail_12695:HG4_Ill_manta_4117:HG4_Ill_scalpel_16541:HG4_PB_SVrefine2Falcon1Dovetail_11353:HG4_PB_SVrefine2PBcRDovetail_9164;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0929487;ClusterMaxSizeDiff=0.0929487;ClusterMaxEditDist=0.270531;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=8431;DistForward=5914;DistMin=5914;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=19:53616465-53616797;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1808.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:./.:0:1:0:0:1/1:0:10:0:10:1/1:0:29:./.:2:11:.:.:.
chr19	53689169	HG2_PB_SVrefine2PB10Xhap12_13339	AGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTAATTTATTTTTTTTTTATTGATCATTCTTGGGTGTTTCTCGCAGAGGGGGATTTGGCAGGGTCATAGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGTCCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTGAGATTAGGGAGTGGTGATGACTCTTAAGGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGATAAGGTCACAGATCAACAGGATCCCAAGGCAGAAGAATTTTTCTTAGTACAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTATCCACAGAGACCCGGCAACCATCCGATTTCTCAATTTTTTCCCCACCCTTCCCGCCTTTCTATTCCACAAAACCGCCATTGTCATCATGGCCCATCCCCAATGAGCCGCTGGGCACACCTCCCAGACGGGGTCGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAAGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCACCCTCCCGGACGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGACGGCCGGGCAGAGGCGCCCCTCACCTCCTGGATAGGGCGGCTGGCTGGGCGGGGGGGCTGTCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGACTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGACCCCCCCCCCCCCGCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTTCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGACTGGCCAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCTCCCCCCTCCCGGACGGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGGCGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGCCAGGCGGGGGGCTGATCCCCCCAACTCCCTCCCAGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACTGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGTCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGACCCCCCCCCCCGCCTCCCTCCCGGATGGGGCGGCTGGCCAGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCTGGGCGGAGACGCTCCTCACTTCCCAGACGGGGTGGTTGCCGGACGGAGGGGCTCCTCACTTCTCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGAGCGGCCGGGCAGAGACGCTCCCCACCTCCCAGACAGGGCTGCGGCCCAGCAGAGGCGCTCCTCACATCCCAGACAGGGCGGCGGGGCAGAGGTGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCGGGGAAGAGGCGCTCCTCGCTTCCCAGATGGGATGGCGGCCAGGCAGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAAGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGGGGCCGGGCAGAGGCTGCAATCTCGGCTCTCCGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGTTGCAGCGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTGAACGAGACTCCATCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGGCGGATCACTCGCGGCTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAAACCCCGTCTCCACCAAAAAAAAAAACGAAAACCAGTCAGGCGTGGCGGTGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGGCAGCAGTACCGTCCAGCCTTGGCTCGGCATCAGAGGGAGACCGTGGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGGGGGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGCCCCTTTGTTTCTTATAGGAGATGCTGGGTAATCCAGATTAAATTTTTGACC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2366:HG2_10X_allpass_2800:HG4_10X_allpass_3293:HG3_10X_allpass_3434:HG4_PB_assemblyticsfalcon_12560:HG2_PB_assemblyticsfalcon_12742:HG4_Ill_Krunchall_24575:HG2_Ill_Krunchall_24240:HG2_PB_HySA_33146:HG4_PB_pbsv_18201:HG2_Ill_tnscope_1923:HG4_PB_SVrefine2PBcRDovetail_9165:HG4_PB_SVrefine2Falcon1Dovetail_11354:HG3_PB_pbsv_17957:HG3_PB_SVrefine2PBcRDovetail_8942:HG3_PB_SVrefine2Falcon1Dovetail_11333:HG2_PB_pbsv_18280:HG2_PB_SVrefine2PBcRplusDovetail_5320:HG2_PB_SVrefine2PB10Xhap12_13339:HG2_PB_SVrefine2Falcon2Bionano_8979:HG2_PB_SVrefine2Falcon1plusDovetail_5777:HG2_10X_SVrefine210Xhap12_12735:HG4_Ill_MetaSV_2447:HG3_Ill_MetaSV_2512;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12735:HG2_PB_SVrefine2Falcon1plusDovetail_5777:HG2_PB_SVrefine2Falcon2Bionano_8979:HG2_PB_SVrefine2PB10Xhap12_13339:HG2_PB_SVrefine2PBcRplusDovetail_5320:HG2_PB_pbsv_18280:HG3_PB_SVrefine2Falcon1Dovetail_11333:HG3_PB_SVrefine2PBcRDovetail_8942:HG3_PB_pbsv_17957:HG4_PB_SVrefine2Falcon1Dovetail_11354:HG4_PB_SVrefine2PBcRDovetail_9165;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0126058;ClusterMaxSizeDiff=0.0126058;ClusterMaxEditDist=0.0126058;PBcalls=14;Illcalls=6;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-2782;DistBack=34381;DistForward=-2768;DistMin=-2768;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=19:53689170-53691968;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1809.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:78:1/1:1:22:0:27:1/1:0:14:0:17:1/1:0:14:1/1:2:138:2796:.:.
chr19	54633442	HG4_PB_assemblyticsfalcon_12584	CGGGCGCAGACAGCTCAGTAAGATGTCCAGTGTAGGAGAAGGCAGAAATGCCAGGCT	C	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_12362:HG3_PB_assemblyticsfalcon_12785:HG4_PB_pbsv_18212:HG3_PB_pbsv_17973:HG2_PB_pbsv_18296:HG4_PB_assemblyticsfalcon_12584:HG2_PB_assemblyticsfalcon_12763;NumClusterSVs=7;ExactMatchIDs=HG2_PB_assemblyticsPBcR_12362:HG4_PB_assemblyticsfalcon_12584:HG2_PB_assemblyticsfalcon_12763;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.142857;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-56;DistBack=59;DistForward=3648;DistMin=59;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=346;REFWIDENED=19:54633383-54633784;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1811.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:28:1/1:1:13:0:9:./.:0:0:0:0:./.:0:4:./.:.:.:.:.:.
chr19	54675943	HG3_PB_pbsv_17975	TCCCTCAGACCCAGGAGTCCAGGCCCCCGGCTCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCCCGGCTCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCCCGGCTCCTCCTCCCTCAGACCCAGGAGAACAGGCCCCCGGCCCCTCCTC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13345:HG2_PB_assemblyticsPBcR_12365:HG2_PB_SVrefine2PBcRplusDovetail_5330:HG3_PB_pbsv_17975:HG2_PB_pbsv_18297;NumClusterSVs=5;ExactMatchIDs=HG3_PB_pbsv_17975;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0135135;ClusterMaxSizeDiff=0.0134228;ClusterMaxEditDist=0.047138;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-149;DistBack=1057;DistForward=-58;DistMin=-58;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=282;REFWIDENED=19:54675901-54676331;PctSeqSimilarity=0.9752;PctSizeSimilarity=0.9933;PctRecOverlap=0.7933;SizeDiff=1;StartDistance=-31;EndDistance=-30;GTMatch=0;TruScore=92;MatchId=1812.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:25:0|1:19:0:2:19:0/0:10:0:10:1:./.:20:3:./.:.:.:.:.:.
chr19	54810770	HG3_Ill_GATKHCSBGrefine_11803	GATTCTCCTGCCTCAGCCTCCCAAGTAATTGGGATTACAGGCGCATGCCACCACACCCAGCTAATTTTTGTATTTTTTATAGAGACGGGGTTTCTCCACGTTGGTAAGGCTGGTCTTGAACTCCCGACCTCAGGTGATCCGCCTGCCTTGGACTCTCAAAGTGCTGGGATTACAGGCGTGAGCCAACGCGCCCAGCCCATGTTGGACCCTTTCTTATCAGGCACACTTCTGAGAGGATGCTATGTTTGGAAGAGTAGATGCTTGATCCATTCTGCTTTTGAGAGCTTGTAATAAAATTTTCAGTTCAGCCAATGTGTTTCTCAGCGTTAGTATTTCTGTTTAAATTCTTGAAACTATTTCAATTTCTTTGCCAAATTTATCTGATACATTTCTAAATTGGTTTTATTTGTTATCATGGAGTTTGCCTAGTTTTTTTTGTTGTTGTTGTTTTTGCATAACTGCTATTTTGAATTCTTCATCCAAGAGCTCACACAGCACCATCTTTTTAGGCTCAGTTCCTAGCTCCATGCTTTGTCCATTTGAGGTGGTCATAATTCCCTGTTTGCTCTTGTTTCTTTTGGACATTTGTCCATGGTCTTTCAATGAAGGACTAGTTATTTATTTATTTATTTTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCTTTCTCCCAGGTTCAAGCA	G	20	PASS	ClusterIDs=HG4_Ill_MetaSV_2450:HG4_PB_pbsv_18214:HG3_10X_allpass_3436:HG2_10X_allpass_2802:HG4_10X_allpass_3296:HG3_PB_pbsv_17978:HG2_PB_pbsv_18299:HG4_Ill_GATKHCSBGrefine_12327:HG3_Ill_GATKHCSBGrefine_11803:HG2_Ill_manta_4853:HG2_Ill_SVrefine2DISCOVARplusDovetail_6203:HG2_Ill_MetaSV_2371:HG2_Ill_GATKHCSBGrefine_11935:HG2_Ill_tnscope_1925:HG4_PB_SVrefine2PBcRDovetail_9172:HG4_PB_SVrefine2Falcon1Dovetail_11367:HG4_Ill_SVrefine2DISCOVARDovetail_12705:HG2_PB_SVrefine2Falcon2Bionano_8987:HG3_PB_SVrefine2PBcRDovetail_8949:HG3_PB_SVrefine2Falcon1Dovetail_11344:HG3_Ill_SVrefine2DISCOVARDovetail_12913:HG2_PB_SVrefine2PB10Xhap12_13347:HG2_PB_SVrefine2Falcon1plusDovetail_5787:HG2_Ill_SVrefine2DISCOVARplusDovetail_6202:HG2_PB_SVrefine2PBcRplusDovetail_5331:HG3_Ill_MetaSV_2515;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11935:HG2_Ill_MetaSV_2371:HG2_Ill_SVrefine2DISCOVARplusDovetail_6203:HG2_Ill_manta_4853:HG3_Ill_GATKHCSBGrefine_11803:HG4_Ill_GATKHCSBGrefine_12327;NumExactMatchSVs=6;ClusterMaxShiftDist=0.325835;ClusterMaxSizeDiff=0.325835;ClusterMaxEditDist=0.325835;PBcalls=11;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=1;SVLEN=-721;DistBack=137;DistForward=-529;DistMin=-529;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=291;REFWIDENED=19:54810676-54811687;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1813.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:1:27:0:23:1/1:0:20:0:15:1/1:0:23:0/1:3:16:1213:.:.
chr19	54856213	HG4_Ill_GATKHCSBGrefine_12329	GGATTACAGGGGTGAGCCACCCCGCCCGGCTGTATCTGTGTTTTTATATTGCATGAATGAACATGAAGAGGATAAATCGGCTTTACTGGGGGAAATGAATTTCAGGAGAACGTGAGGAAGCAACAGATGGAGATCACTGGTGGGCGAATTGATCTGGTGAGAAATGACAGGTGCTTGGATCAGGTTGATGCAGGAAGTGGAGGTCATGAGGGTTTTGAGATATGTGTGTGATTAGAGTCATCAGAACTTGAAGAACCTCTAGATTCGATTTTCAAAGTGAAAGATCTGCGAATGGACTCATCTTTTTTTTTTTTTTCAAGATGGACTCTTGCTCTGTCGCCCAGGCTGGAGTGCCACGGCGCGATGTCGGCTCACTGCGAACTCCGCCTCCCTGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCGGCTAAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5332:HG4_10X_allpass_3297:HG2_10X_allpass_2803:HG4_Ill_MetaSV_2451:HG4_Ill_manta_4122:HG4_Ill_GATKHCSBGrefine_12329:HG2_Ill_manta_4854:HG2_Ill_MetaSV_2372:HG4_Ill_Spiral_1404:HG2_Ill_Spiral_1183:HG4_PB_pbsv_18216:HG2_PB_pbsv_18300:HG2_Ill_tnscope_1926:HG4_PB_SVrefine2PBcRDovetail_9173:HG2_PB_SVrefine2Falcon1plusDovetail_5788:HG4_Ill_SVrefine2DISCOVARDovetail_12706:HG2_PB_SVrefine2PB10Xhap12_13348:HG2_Ill_SVrefine2DISCOVARplusDovetail_6204:HG2_10X_SVrefine210Xhap12_12753;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_MetaSV_2372:HG2_Ill_manta_4854:HG4_Ill_GATKHCSBGrefine_12329:HG4_Ill_manta_4122;NumExactMatchSVs=4;ClusterMaxShiftDist=0.345083;ClusterMaxSizeDiff=0.345083;ClusterMaxEditDist=0.345083;PBcalls=6;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=-567;DistBack=-4682;DistForward=-560;DistMin=-4682;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=115;REFWIDENED=19:54856119-54856800;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1814.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:28:0|1:25:3:2:14:1|0:0:26:60:0:0/1:59:15:0/1:42:9:.:.:.
chr19	55001827	HG3_Ill_250bpfermikitraw_23242	CTTCCTTCCTTCCTTTCTTTCTCTCTCTCTCCCTCCCTTCCTTTCCTTCTTTCTCTCTTTCTCTTT	C	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_23919:HG3_PB_pbsv_17986:HG2_PB_assemblyticsfalcon_12775:HG2_Ill_SpiralSDKrefine_8034:HG4_PB_assemblyticsfalcon_12597:HG3_Ill_GATKHC_28629:HG3_Ill_GATKHCSBGrefine_11806:HG3_Ill_250bpfermikitraw_23242:HG2_Ill_GATKHC_28724:HG2_Ill_GATKHCSBGrefine_11938:HG2_PB_assemblyticsPBcR_12373:HG2_PB_pbsv_18306:HG4_Ill_250bpfermikitraw_23549;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11938:HG2_Ill_GATKHC_28724:HG3_Ill_250bpfermikitraw_23242:HG3_Ill_GATKHCSBGrefine_11806:HG3_Ill_GATKHC_28629:HG4_PB_assemblyticsfalcon_12597;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.09375;PBcalls=5;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-65;DistBack=-341;DistForward=134;DistMin=-341;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=2873;REFWIDENED=19:55001689-55004626;PctSeqSimilarity=0.9714;PctSizeSimilarity=0.9559;PctRecOverlap=0.2319;SizeDiff=-3;StartDistance=-50;EndDistance=-53;GTMatch=1;TruScore=71;MatchId=1815.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:44:1/1:4:28:4:14:./.:3:7:9:4:0/1:11:14:./.:.:.:1288:.:.
chr19	56041811	HG4_10X_allpass_3301	AGGCCTAGTGTGACCTGTGAGGCCTGCGGGTTTAGTGTGGCCTAGGGTGACCCCGTGAGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGGGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGTGGCTTAGTGTGACCCGTGAGGCCTGTGGGTTTAGTGTGGCCTAGTGTGACCCGTGAGGCCTGTGGGTTTAGTGTGGCCTAGGGTGACCCCGTGAGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGGGGCCTAGTGTGACCTGTGAGGCCTGTGGGTTTAGTGTGGCTTAGTGTGACCCGTGAGGCCTGTGGGTTTAGTGT	A	20	PASS	ClusterIDs=HG3_10X_allpass_3439:HG4_Ill_Krunchall_24610:HG3_Ill_Krunchall_23842:HG4_PB_HySA_26481:HG2_PB_HySA_33209:HG2_PB_pbsv_18341:HG3_PB_pbsv_18022:HG4_Ill_MetaSV_2462:HG3_Ill_MetaSV_2524:HG2_Ill_tnscope_1927:HG2_Ill_MetaSV_2378:HG4_PB_pbsv_18258:HG4_Ill_manta_4127:HG4_Ill_GATKHCSBGrefine_12354:HG4_10X_allpass_3301:HG3_Ill_GATKHCSBGrefine_11817:HG2_Ill_manta_4858:HG2_Ill_SpiralSDKrefine_8051:HG2_Ill_GATKHCSBGrefine_11952:HG4_PB_SVrefine2PBcRDovetail_9198:HG4_PB_SVrefine2Falcon1Dovetail_11398:HG4_Ill_SVrefine2DISCOVARDovetail_12726:HG3_PB_SVrefine2Falcon1Dovetail_11370:HG3_Ill_SVrefine2DISCOVARDovetail_12926:HG2_PB_SVrefine2PB10Xhap12_13378:HG2_Ill_SVrefine2DISCOVARplusDovetail_6220:HG2_10X_SVrefine210Xhap12_12783;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_11952:HG2_Ill_SpiralSDKrefine_8051:HG2_Ill_manta_4858:HG3_Ill_GATKHCSBGrefine_11817:HG4_10X_allpass_3301:HG4_Ill_GATKHCSBGrefine_12354:HG4_Ill_manta_4127:HG4_PB_pbsv_18258;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0118343;ClusterMaxSizeDiff=0.0118343;ClusterMaxEditDist=0.0177515;PBcalls=9;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-336;DistBack=2609;DistForward=-286;DistMin=-286;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=56;REFWIDENED=19:56041808-56042199;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1816.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:43:1/1:2:11:4:19:./.:0:2:0:9:1/1:0:37:./.:2:6:.:.:.
chr19	56580932	HG2_PB_SVrefine2PB10Xhap12_13385	AGTCTATTGTAACTGCTCAGCTCTGCTGATACAGGGTAAAAACAAGCATAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12788:HG4_Ill_svaba_22430:HG4_Ill_Krunchall_24619:HG4_Ill_GATKHC_28758:HG4_Ill_GATKHCSBGrefine_12359:HG4_Ill_250bpfermikitraw_23576:HG4_Ill_150bpfermikitraw_22693:HG4_10X_allpass_3302:HG3_Ill_svaba_22683:HG2_Ill_svaba_22466:HG2_Ill_scalpel_16967:HG2_Ill_breakscan11_2627:HG2_Ill_Krunchall_24290:HG2_Ill_GATKHC_28784:HG2_Ill_GATKHCSBGrefine_11957:HG2_Ill_250bpfermikitraw_23953:HG2_Ill_150bpfermikitraw_22576:HG2_PB_assemblyticsfalcon_12821:HG2_PB_HySA_33227:HG4_Ill_svaba_22429:HG4_Ill_SVrefine2DISCOVARDovetail_12733:HG3_Ill_svaba_22682:HG3_Ill_Krunchall_23853:HG3_Ill_GATKHC_28691:HG3_Ill_GATKHCSBGrefine_11820:HG3_Ill_250bpfermikitraw_23274:HG2_PB_SVrefine2PBcRplusDovetail_5361:HG2_PB_SVrefine2PB10Xhap12_13385:HG2_PB_SVrefine2Falcon2Bionano_9013:HG2_Ill_svaba_22465:HG2_Ill_SVrefine2DISCOVARplusDovetail_6225:HG2_Ill_Krunchall_24289:HG2_Ill_GATKHC_28783:HG2_Ill_GATKHCSBGrefine_11956:HG2_Ill_250bpfermikitraw_23952:HG2_Ill_150bpfermikitraw_22575;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12788:HG4_Ill_svaba_22429:HG4_Ill_SVrefine2DISCOVARDovetail_12733:HG3_Ill_svaba_22682:HG3_Ill_Krunchall_23853:HG3_Ill_GATKHC_28691:HG3_Ill_GATKHCSBGrefine_11820:HG3_Ill_250bpfermikitraw_23274:HG2_PB_SVrefine2PBcRplusDovetail_5361:HG2_PB_SVrefine2PB10Xhap12_13385:HG2_PB_SVrefine2Falcon2Bionano_9013:HG2_Ill_svaba_22465:HG2_Ill_SVrefine2DISCOVARplusDovetail_6225:HG2_Ill_Krunchall_24289:HG2_Ill_GATKHC_28783:HG2_Ill_GATKHCSBGrefine_11956:HG2_Ill_250bpfermikitraw_23952:HG2_Ill_150bpfermikitraw_22575;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.038835;PBcalls=5;Illcalls=29;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=21;HG3count=6;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=23147;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=50;REFWIDENED=19:56580933-56581032;PctSeqSimilarity=0.9934;PctSizeSimilarity=1;PctRecOverlap=0.4902;SizeDiff=0;StartDistance=-26;EndDistance=-26;GTMatch=1;TruScore=82;MatchId=1817.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:15:38:./.:14:25:1:9:./.:0:11:1:9:1/1:0:42:./.:.:.:.:.:.
chr19	56610005	HG2_Ill_breakscan11_2628	ATACAGCCGCAGGGTGATGCCACCAGGGTGATATGGCCGCCGGGTGATGGAGCCTAGGTGATACGGCCACCAGGTGAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_18037:HG4_PB_pbsv_18265:HG2_PB_pbsv_18351:HG4_Ill_GATKHC_28759:HG4_Ill_GATKHCSBGrefine_12361:HG3_Ill_GATKHC_28693:HG3_Ill_GATKHCSBGrefine_11823:HG2_Ill_GATKHC_28785:HG2_Ill_GATKHCSBGrefine_11959:HG2_PB_PB10Xdip_16086:HG4_PB_HySA_26504:HG3_PB_HySA_27447:HG2_PB_HySA_33231:HG4_Ill_250bpfermikitraw_23577:HG4_Ill_150bpfermikitraw_22694:HG4_10X_allpass_3303:HG3_Ill_250bpfermikitraw_23277:HG3_Ill_150bpfermikitraw_22593:HG3_10X_allpass_3441:HG2_Ill_breakscan11_2628:HG2_Ill_Krunchall_24291:HG2_Ill_250bpfermikitraw_23954:HG2_Ill_150bpfermikitraw_22578:HG2_PB_assemblyticsPBcR_12423:HG4_PB_assemblyticsfalcon_12644:HG3_PB_assemblyticsfalcon_12848:HG2_PB_assemblyticsfalcon_12823;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22578:HG2_Ill_250bpfermikitraw_23954:HG2_Ill_Krunchall_24291:HG2_Ill_breakscan11_2628:HG3_10X_allpass_3441:HG3_Ill_150bpfermikitraw_22593:HG3_Ill_250bpfermikitraw_23277:HG4_10X_allpass_3303:HG4_Ill_150bpfermikitraw_22694:HG4_Ill_250bpfermikitraw_23577;NumExactMatchSVs=10;ClusterMaxShiftDist=0.120805;ClusterMaxSizeDiff=0.120805;ClusterMaxEditDist=0.136054;PBcalls=11;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-77;DistBack=14602;DistForward=1892;DistMin=1892;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=19:56610004-56610086;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=0.9872;SizeDiff=0;StartDistance=-1;EndDistance=-1;GTMatch=0;TruScore=99;MatchId=1818.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:65:1/1:2:29:3:21:1/1:1:14:0:10:1/1:0:10:./.:.:.:.:.:.
chr19	56866457	HG2_PB_pbsv_18362	AACGTGGTTTTTCTATTGAGGATAGTAATCATGATGTGGGGCATTTTGTTCCCAATTGACAGCTCCACGGGTCTCCCATACATAATTTCAGAAGCTCCACATGAAGCCTCTAGCATTGAGTAACCCTGGGCAGTAAGTGTGAACTTTTTCTCATGATAGATTATTGCTTAAATCAAAACTTACCAAAACTATCAAAATTGTATAAAACTGCCTCCAAATGTCTCAGGTGATGTGGTAGTAACAGTATTATCAAAATGTTCTAATATTACAGTGTCACAATGTATTAATACTGTGCTGTATTTCTATTTGCTTATTTACTGTCAGGTTCATTTATTTTACTGTATACTCCATGATTTTGAAGATCATGTCAATTTTTTTCCCAATTTTTACTGTTTTACACTGACTTAGCTGATGCTTAAAACATTGTAGAGATACAAGAAAATACTGGAAAAACTAAATTAAAAAATAAAGTAACAACAATAGCCCAAGACCAAGCTCTGTAAAACAATTATGACTGTAAAACAATTATGATAAAATGATTTATAACAGAAAATTCCAACTTGAACTTTGGCTCCAGACTGTGTTTATTGGCAAATAGTGCAAGATGTTTGAAGCGCAGTTTGTGTGTGTTTAAACTGGCAGTACTGATCCTTCCATGTATTTGTTCCTGATTATTTATTAACTTAGAATATGCATCCATTCTTTATTCCTTCATATGTTTAGGTATTAAGCACCTATTATGGGTCAAGGTTTGAATCAGGATTGGGAAGAAGGTAATGATTATGATGACCTCAAGTCACAACCTAAAGAAATTTACAGATTAGTATTTGGGAAGACAAAGAACAGACATACACTTATTTTCTGTGGTGCCAATATTATTTACTGACATCCTCATTAATACCAGATACCAGTGTGTAGTTGGTGAAAAACATCTACTTTAAGATATGCAATAAATAGATGAAAGGATGAGACAGGGAGAAAAATGTAGGGAAAGTACCACATTGTCCCAGAAGGTAAATGCAGGGTTTGCTGATGGAGTTATGCAGATGGAGGATTTGGTAACTGTCTTGTAGCGGGACAATCAGAGATGGGAGAGACTGAACAGAGTTCAGGAGAGCCTTTATTAAGGTGAGCACCTGGCTCAGTAGGACTAGCGTCCAGGAAAGTCTGAGCCCCGAACAAAGAGAGCAGCCACCTTTTAAACAATCAGTGGTGGGAATTACGTGATGCAGGAAGCGTACTTACAGAAGCGAGAAGAAAGGCAGTTGTTACTCCATGTCTTACATCCTTGGGAATACATGGTTGTGTAATATATACGTATCAATCTTATGACCTTGCAGCTGTGCTGGGGAGGTAAGCAAGAATTCACAGAGCTCTAAGGAATGTGAAACTGGGGAGTATAGATGAGGCTCATGGAGCACAGAAGGAGCACAGGCTGTTAATATCCTTCTCTAACTTCTACTACGGGGTGGGGACGGGGGCGCTACCTTATAACTAAGCCCTGAGGGGAAAGTTAATTTTCTGGCTTCACATATTGTAAAATTCATTAATTTCCTCTTCAGTCTCAGTGAGGAGAAAACCAAGAGTGTATAACTGATTCCATTTACCCCATATCCTTCTTTGTGCAATTCTTATAATTTTTACTTTTGCCTGCAGTATAAAAACTGCCTGTGGGGTTATTGTTCTTTAAAGAGTCGGTAGTGTTTTACAGCAATTCCATCAGGAAAGAAAATGTTGTCTTTTATATATACTCCTTTACTGCTTCTCAGGTTCATCCCTGGACCTGCACTATGATTCCTGCAGACTGAAGGAGTTCCTTTAGAACTGGTTGTCATGTAGGTTGTAGGCAATAAAAATTCTCATAGCTTGGCATGTTTCTAAGATTACCTTGATTTTTATCCTCATATTTAAAGGATATTTTCATAGGATATAGCATTAAGTATTTTTTATTCTTCAGCAATTTAAAGACAATTTTCCATTTGTGTTAGGCCTCCATTTTTTGGATGAGAAGTCAGGGGGCCTTCTTCTCCTCTTTCTCCACTGTCTGTGACGTGTCTGTTTTTGTCTGGCTACATTCAATGACTCAGCTGGATGCCAAGGGTGTTAAGGAACTGTTCATAGTCACTGCTGTGTGTTAACAAGTTTGGAGAGTGAGGAATAATAAAACATATCACTGCTATTTGGTAAATGTCTGGTGATCTTGCCTCATGCATGCGAAGCCCAGCCCTCAGCCATAAGTGTACAGAGACCCCTGACACAGACTTTATCATTACATAATACTTACACATGTTTTGTTGGTACACGCAGTATTTTGATACATGCATACAATGTATACCAATAAACCAGGGCAACTGGGACTCCCTCACCCCAAACCTTCACCCATCTTTATGTTGGGAACATTCCAATTCCTCTTCCCCAGCAACTATACCACAAAATATTGTTAGCTATAGTTCTACTGTACTGTCAAATACTAGATCTTAATCCTTCTGTCCACATGAAAAAAAATCAAATTCAAATTGAAGGACATTTGATAAAAAAATTTGACAAGTGCTCTTCAAAACTACAAAAACACCCTGAAGTACACAGACCAACGACACCATGAAGCAACTAGATTAACAAGTCTGCAAAATTAACCAGCCAGCATCATGATGACAGGATCAAATTCACACATAACAATATTAACCTTATGTGTGAATGGGCTAAATGCCCCCAGTAAAAGACAAAGACTAAAAAATTGGATAAAGAATCAAGACCCATTGGACTGCTGTATTCAAGAGACCCATCTCACGTGCAAAGATACACCTAGGCTCAAAGTAAACGGATGGAGGAAAATTTACCAAGCAAATGGAAAGCAGAAACAAGCAGGGGTTGCAATCCTAGTCTCTGGCAAAACAGACTTTAAACCAAGAAAGGTCAAAAAAGACAAAGAAGGGCATTAGGTAATGGTAAAAACTTTAATTCAGCAAAAAGAGCCAACTATCATAAATATATATTCACCCAATACAGGAGCACCCAGATTCATAAAACAAGTTATTTTTATTTTGTTTTATTAGGACTGAATCTCTCTCTATCTCACAGGCTGTACTGCAGTGGTGCGATCTCAGCTTACTGCAACCTCCACTTTTCAGGATCAAGTGACTCTTGTGCTTCAGCCTCTCAAGTAGCTAGGATTACAGGCGCCCACTACCATACCCGTCTAATTTTTGTATTTTGAGTAGAGGCAGGGTTTCACCACGTAGGCCAGGCTGGTCTCGGACTCCTGACCTCAAGTGATCCACCCGCCTCAGCCTCCCAAAGCGCTGGGATTACAGGCGTGAGCCTCCACGCCCAGCCCATAAAACAAATTTTTAAAGACATACAAAGAGACTTGAATACCCACCCAATAATAGCGGGAGACTTTAATACCTCACTGCCAATATTAGACAGATCATCGAGAAAGAAAATTTAGAAAGATATTCAGGACTTG	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1928:HG3_10X_allpass_3443:HG2_10X_allpass_2808:HG2_PB_assemblyticsPBcR_12433:HG4_PB_assemblyticsfalcon_12652:HG4_PB_SVrefine2Falcon1Dovetail_11406:HG3_PB_pbsv_18049:HG3_PB_assemblyticsfalcon_12859:HG3_PB_SVrefine2PBcRDovetail_8975:HG3_PB_SVrefine2Falcon1Dovetail_11380:HG3_Ill_SVrefine2DISCOVARDovetail_12942:HG2_PB_pbsv_18362:HG2_PB_assemblyticsfalcon_12834:HG2_PB_SVrefine2PBcRplusDovetail_5368:HG2_PB_SVrefine2PB10Xhap12_13392:HG2_PB_SVrefine2Falcon2Bionano_9020:HG2_PB_SVrefine2Falcon1plusDovetail_5820:HG2_Ill_breakscan11_2629:HG2_Ill_SpiralSDKrefine_8059:HG2_Ill_SVrefine2DISCOVARplusDovetail_6233:HG2_Ill_MetaSV_2383:HG2_10X_SVrefine210Xhap12_12802:HG3_Ill_Krunchall_23857:HG2_Ill_Krunchall_24296:HG3_Ill_MetaSV_2530;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12802:HG2_Ill_MetaSV_2383:HG2_Ill_SVrefine2DISCOVARplusDovetail_6233:HG2_Ill_SpiralSDKrefine_8059:HG2_Ill_breakscan11_2629:HG2_PB_SVrefine2Falcon1plusDovetail_5820:HG2_PB_SVrefine2Falcon2Bionano_9020:HG2_PB_SVrefine2PB10Xhap12_13392:HG2_PB_SVrefine2PBcRplusDovetail_5368:HG2_PB_assemblyticsfalcon_12834:HG2_PB_pbsv_18362:HG3_Ill_SVrefine2DISCOVARDovetail_12942:HG3_PB_SVrefine2Falcon1Dovetail_11380:HG3_PB_SVrefine2PBcRDovetail_8975:HG3_PB_assemblyticsfalcon_12859:HG3_PB_pbsv_18049:HG4_PB_SVrefine2Falcon1Dovetail_11406:HG4_PB_assemblyticsfalcon_12652;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0217329;ClusterMaxSizeDiff=0.0217329;ClusterMaxEditDist=0.0217329;PBcalls=13;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=12;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-3465;DistBack=3913;DistForward=-3464;DistMin=-3464;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=19:56866458-56869923;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1819.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:62:61:0|1:55:1:2:37:1|0:1:38:80:0:0/1:56:18:0/1:266:141:3407:.:1
chr19	57111544	HG2_10X_SVrefine210Xhap12_12805	ACCCTCTGTATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG	A	20	PASS	ClusterIDs=HG3_Ill_Spiral_18516:HG3_PB_assemblyticsfalcon_12864:HG4_PB_pbsv_18276:HG4_Ill_MetaSV_2469:HG3_Ill_MetaSV_2533:HG4_PB_assemblyticsfalcon_12659:HG4_PB_SVrefine2Falcon1Dovetail_11410:HG4_Ill_scalpel_16594:HG4_Ill_GATKHCSBGrefine_12367:HG4_10X_allpass_3304:HG3_PB_pbsv_18052:HG3_PB_SVrefine2PBcRDovetail_8977:HG3_PB_SVrefine2Falcon1Dovetail_11383:HG3_Ill_scalpel_17319:HG3_Ill_SVrefine2DISCOVARDovetail_12943:HG3_Ill_GATKHCSBGrefine_11826:HG3_10X_allpass_3444:HG2_PB_SVrefine2PB10Xhap12_13396:HG2_Ill_scalpel_16972:HG2_Ill_manta_4862:HG2_Ill_GATKHCSBGrefine_11964:HG2_10X_SVrefine210Xhap12_12805:HG2_PB_pbsv_18366:HG4_Ill_Spiral_1406;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12805:HG2_Ill_GATKHCSBGrefine_11964:HG2_Ill_manta_4862:HG2_Ill_scalpel_16972:HG2_PB_SVrefine2PB10Xhap12_13396:HG3_10X_allpass_3444:HG3_Ill_GATKHCSBGrefine_11826:HG3_Ill_SVrefine2DISCOVARDovetail_12943:HG3_Ill_scalpel_17319:HG3_PB_SVrefine2Falcon1Dovetail_11383:HG3_PB_SVrefine2PBcRDovetail_8977:HG3_PB_pbsv_18052:HG4_10X_allpass_3304:HG4_Ill_GATKHCSBGrefine_12367:HG4_Ill_scalpel_16594:HG4_PB_SVrefine2Falcon1Dovetail_11410:HG4_PB_assemblyticsfalcon_12659;NumExactMatchSVs=17;ClusterMaxShiftDist=0.099359;ClusterMaxSizeDiff=0.099359;ClusterMaxEditDist=0.099359;PBcalls=9;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=8;TenXexactcalls=3;CGexactcalls=0;HG2count=6;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=-11;DistForward=-310;DistMin=-310;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=19:57111545-57111878;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1820.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:41:0|1:30:1:0:36:1|0:0:22:48:0:0/1:22:4:0/1:15:7:.:.:.
chr19	57458398	HG3_Ill_GATKHC_28707	GTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	G	20	PASS	ClusterIDs=HG4_Ill_svaba_22438:HG2_PB_HySA_33261:HG3_PB_assemblyticsfalcon_12870:HG2_PB_assemblyticsPBcR_12442:HG3_PB_assemblyticsfalcon_12869:HG3_Ill_scalpel_17322:HG3_Ill_Krunchall_23862:HG3_Ill_GATKHC_28707:HG3_Ill_GATKHCSBGrefine_11832:HG3_Ill_250bpfermikitraw_23286:HG3_Ill_150bpfermikitraw_22599:HG2_Ill_manta_4863:HG2_Ill_Krunchall_24301:HG2_Ill_GATKHC_28797:HG2_Ill_GATKHCSBGrefine_11971:HG2_Ill_250bpfermikitraw_23966:HG2_Ill_150bpfermikitraw_22582:HG2_PB_pbsv_18372:HG4_PB_assemblyticsfalcon_12669:HG4_Ill_Krunchall_24624:HG4_Ill_GATKHC_28778:HG4_Ill_GATKHCSBGrefine_12370:HG4_Ill_250bpfermikitraw_23586:HG4_Ill_SVrefine2DISCOVARDovetail_12749:HG4_PB_SVrefine2PBcRDovetail_9211:HG3_PB_SVrefine2PBcRDovetail_8982:HG3_Ill_SVrefine2DISCOVARDovetail_12950:HG2_PB_SVrefine2Falcon1plusDovetail_5827:HG2_Ill_SVrefine2DISCOVARplusDovetail_6238:HG2_10X_SVrefine210Xhap12_12810:HG3_PB_pbsv_18061;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22582:HG2_Ill_250bpfermikitraw_23966:HG2_Ill_GATKHCSBGrefine_11971:HG2_Ill_GATKHC_28797:HG2_Ill_Krunchall_24301:HG2_Ill_manta_4863:HG3_Ill_150bpfermikitraw_22599:HG3_Ill_250bpfermikitraw_23286:HG3_Ill_GATKHCSBGrefine_11832:HG3_Ill_GATKHC_28707:HG3_Ill_Krunchall_23862:HG3_Ill_scalpel_17322:HG3_PB_assemblyticsfalcon_12869;NumExactMatchSVs=13;ClusterMaxShiftDist=0.301887;ClusterMaxSizeDiff=0.301887;ClusterMaxEditDist=0.320755;PBcalls=10;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-60;DistBack=-31;DistForward=11331;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=24;REFWIDENED=19:57458395-57458478;PctSeqSimilarity=0.8039;PctSizeSimilarity=0.6667;PctRecOverlap=0.6721;SizeDiff=20;StartDistance=0;EndDistance=20;GTMatch=1;TruScore=71;MatchId=1821.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:12:41:./.:7:6:1:24:1|0:1:13:6:0:0/1:12:13:./.:.:.:.:2559:.
chr19	57474905	HG2_Ill_breakscan11_2631	AAGATCTTTTGGCAGTAGACTTCAAAGTTTAATATCTGCATGCCCTTTGACCCAGCAAATCCACTTCTGGGAACCCACCTCCCCACAGACATACACAAAAGCACACCCCACACACACACATGGTCATGGCAGCCTTGCCAGAGCACGATCAGCCGAAAAGTCCATAGAACGTGCATCTGGGTTGTGTGAAGCTCAACACTGATGCAGAATTTTACAGTCCAAAGACATCAGCCCCTTGTTAGACAAATGAGCTGTGTTTTGAAGGTCATCTAATGTTAAGATGTATATTACATAAGCAAAAGTTGGATTAAAAAACAAAAATGCATCATTATCCAAGTTTGAGCAACTGTAATACATTTATGCATCCATTTATTTATTCAGCTTCTAAAAACCATTGATGCTGGGCATGGTGGCTCATGCCTGTAATCCCAGTACTTTGGGAGGGTGAGGTGGGCAAATCTCAAACCTGGGAGTTTCAGACCAGCCTGGGCAACATGGCGAAACCCCGTCTCTACAGAAAAAAAAAAAAATTAGCTGGGTGTGGTGGCGCCTGTGGTCCCAGGTACTTGGGGAGGCTGTGGTGGGAGGATCACCTGAGCCAGGGAAGGTTAAGGCTGCAGTTGGAGGTTGAGGATCACCTGAGCCTGCGAGGTTGAGGCTGCAGTGAGCCATGGGGATGCCACTGCACTCCAGCCTGGGCGACAG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_18062:HG2_10X_allpass_2810:HG4_10X_allpass_3305:HG3_Ill_Krunchall_23864:HG4_PB_assemblyticsfalcon_12670:HG2_PB_assemblyticsPBcR_12444:HG3_PB_assemblyticsfalcon_12872:HG4_PB_pbsv_18284:HG4_Ill_Krunchall_24626:HG2_PB_pbsv_18373:HG2_Ill_Krunchall_24303:HG4_PB_SVrefine2PBcRDovetail_9212:HG4_PB_SVrefine2Falcon1Dovetail_11417:HG4_Ill_manta_4131:HG4_Ill_SVrefine2DISCOVARDovetail_12750:HG4_Ill_MetaSV_2472:HG4_Ill_GATKHCSBGrefine_12371:HG3_PB_SVrefine2PBcRDovetail_8983:HG3_PB_SVrefine2Falcon1Dovetail_11388:HG3_Ill_SVrefine2DISCOVARDovetail_12951:HG3_Ill_MetaSV_2535:HG3_Ill_GATKHCSBGrefine_11833:HG3_10X_allpass_3445:HG2_PB_SVrefine2PBcRplusDovetail_5377:HG2_PB_SVrefine2PB10Xhap12_13403:HG2_PB_SVrefine2Falcon2Bionano_9029:HG2_PB_SVrefine2Falcon1plusDovetail_5828:HG2_Ill_breakscan11_2631:HG2_Ill_SpiralSDKrefine_8064:HG2_Ill_MetaSV_2387:HG2_Ill_GATKHCSBGrefine_11972:HG2_10X_SVrefine210Xhap12_12811:HG2_Ill_tnscope_1929;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12811:HG2_Ill_GATKHCSBGrefine_11972:HG2_Ill_MetaSV_2387:HG2_Ill_SpiralSDKrefine_8064:HG2_Ill_breakscan11_2631:HG2_PB_SVrefine2Falcon1plusDovetail_5828:HG2_PB_SVrefine2Falcon2Bionano_9029:HG2_PB_SVrefine2PB10Xhap12_13403:HG2_PB_SVrefine2PBcRplusDovetail_5377:HG3_10X_allpass_3445:HG3_Ill_GATKHCSBGrefine_11833:HG3_Ill_MetaSV_2535:HG3_Ill_SVrefine2DISCOVARDovetail_12951:HG3_PB_SVrefine2Falcon1Dovetail_11388:HG3_PB_SVrefine2PBcRDovetail_8983:HG4_Ill_GATKHCSBGrefine_12371:HG4_Ill_MetaSV_2472:HG4_Ill_SVrefine2DISCOVARDovetail_12750:HG4_Ill_manta_4131:HG4_PB_SVrefine2Falcon1Dovetail_11417:HG4_PB_SVrefine2PBcRDovetail_9212;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00853485;ClusterMaxSizeDiff=0.00853485;ClusterMaxEditDist=0.0127932;PBcalls=14;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=11;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-704;DistBack=5094;DistForward=-703;DistMin=-703;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=19:57474906-57475611;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1822.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:24:34:./.:12:10:8:10:0|1:53:0:0:25:0/1:64:18:0/1:54:10:.:1363:.
chr19	57491143	HG4_Ill_150bpfermikitraw_22698	GGGGGAGGTTCTGTGGTACGGGGTGGTGGCCAGGACCTCAGATGGATGGGTCACCCTCA	G	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9213:HG4_PB_assemblyticsfalcon_12671:HG2_PB_assemblyticsPBcR_12445:HG3_PB_pbsv_18063:HG3_PB_HySA_27465:HG2_PB_pbsv_18374:HG4_Ill_GATKHC_28780:HG4_Ill_GATKHCSBGrefine_12372:HG4_Ill_150bpfermikitraw_22698:HG3_PB_assemblyticsfalcon_12873:HG3_Ill_GATKHC_28710:HG2_Ill_SpiralSDKrefine_8065:HG2_Ill_GATKHC_28800:HG2_Ill_250bpfermikitraw_23968:HG4_PB_pbsv_18285;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_23968:HG2_Ill_GATKHC_28800:HG2_Ill_SpiralSDKrefine_8065:HG3_Ill_GATKHC_28710:HG3_PB_assemblyticsfalcon_12873:HG4_Ill_150bpfermikitraw_22698:HG4_Ill_GATKHCSBGrefine_12372:HG4_Ill_GATKHC_28780;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0677966;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.116667;PBcalls=8;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-58;DistBack=15531;DistForward=7833;DistMin=7833;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=284;REFWIDENED=19:57491047-57491388;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1823.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:35:0|1:26:3:1:23:0|1:5:1:0:6:0/1:11:11:./.:.:.:.:.:.
chr19	57683315	HG4_Ill_GATKHC_28788	GGGCCGCGAGCTGGGGTCCGGGGAGCGCGAGCGGGGGTCCGGGGGGCGGGGGCCGC	G	20	PASS	ClusterIDs=HG4_Ill_GATKHC_28788:HG2_PB_PB10Xdip_16122:HG4_Ill_scalpel_16600;NumClusterSVs=3;ExactMatchIDs=HG4_Ill_GATKHC_28788:HG4_Ill_scalpel_16600;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0176991;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.0176991;PBcalls=1;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-55;DistBack=-90;DistForward=14;DistMin=-90;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=19:57683314-57683373;PctSeqSimilarity=0.7742;PctSizeSimilarity=0.6111;PctRecOverlap=0.5165;SizeDiff=-35;StartDistance=-9;EndDistance=-44;GTMatch=0;TruScore=63;MatchId=1824.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:26:0|1:27:3:1:22:./.:11:0:0:1:./.:3:1:./.:.:.:.:.:.
chr19	57685337	HG2_PB_SVrefine2PB10Xhap12_13407	GACCTCAGGTGATCCACCCCCCTCGGCCTCCCAAAGTGTTGAGATTACAGGCGTGAGCCACCGCGCCCGGCCC	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13407:HG2_PB_pbsv_18379:HG4_PB_pbsv_18291:HG2_PB_HySA_33266:HG2_PB_SVrefine2PBcRplusDovetail_5379;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_13407:HG2_PB_SVrefine2PBcRplusDovetail_5379;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0138889;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0689655;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-72;DistBack=1736;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=217;REFWIDENED=19:57685338-57685626;PctSeqSimilarity=0.9706;PctSizeSimilarity=1;PctRecOverlap=0.0822;SizeDiff=0;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=68;MatchId=1825.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:30:0|1:30:2:3:27:0/0:27:0:12:1:0/0:26:0:./.:.:.:.:.:.
chr19	57993883	HG3_PB_SVrefine2PBcRDovetail_8987	CCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCCTCTCCCTTCTCCCCTCTCCCTCTCGGTCTCCCTCTCCCTCTCTTG	TT	10	PASS	ClusterIDs=HG3_PB_pbsv_18071:HG2_PB_pbsv_18382:HG2_PB_assemblyticsPBcR_12453:HG4_PB_SVrefine2Falcon1Dovetail_11421:HG3_PB_SVrefine2PBcRDovetail_8987:HG2_PB_SVrefine2PB10Xhap12_13410:HG2_PB_SVrefine2Falcon2Bionano_9031:HG4_PB_assemblyticsfalcon_12679:HG2_PB_HySA_33273:HG2_PB_assemblyticsfalcon_12853:HG4_PB_pbsv_18295;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9031:HG2_PB_SVrefine2PB10Xhap12_13410:HG3_PB_SVrefine2PBcRDovetail_8987:HG4_PB_SVrefine2Falcon1Dovetail_11421;NumExactMatchSVs=4;ClusterMaxShiftDist=0.320513;ClusterMaxSizeDiff=0.320513;ClusterMaxEditDist=0.35443;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-89;DistBack=68;DistForward=620;DistMin=68;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=19:57993882-57993974;PctSeqSimilarity=0.9506;PctSizeSimilarity=0.9326;PctRecOverlap=0.0879;SizeDiff=6;StartDistance=76;EndDistance=83;GTMatch=0;TruScore=65;MatchId=1826.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:41:1/1:3:28:4:11:./.:1:1:6:1:0/0:13:1:./.:.:.:.:.:.
chr19	58567913	HG2_PB_SVrefine2PB10Xhap12_13414	CCCTTGAGGGCCACTCTCAATGCGCTCCACCTTGGCTGACGGAAGCAAGGACGTGGCCCAGGATCCTGGAGGGCCACTCCTGTGTGCGCCACCTTGGCTGACAGAAGCAAGGACGTGGCCCAGGGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12821:HG2_Ill_Krunchall_24314:HG4_PB_pbsv_18299:HG3_PB_pbsv_18074:HG2_PB_pbsv_18385:HG3_PB_HySA_27472:HG2_PB_HySA_33279:HG4_Ill_GATKHCSBGrefine_12385:HG4_10X_allpass_3307:HG2_Ill_SpiralSDKrefine_8072:HG2_Ill_GATKHCSBGrefine_11980:HG2_Ill_250bpfermikitraw_23978:HG2_Ill_150bpfermikitraw_22590:HG4_PB_SVrefine2PBcRDovetail_9220:HG4_Ill_SVrefine2DISCOVARDovetail_12761:HG3_PB_SVrefine2PBcRDovetail_8988:HG3_Ill_SVrefine2DISCOVARDovetail_12966:HG2_PB_SVrefine2PBcRplusDovetail_5383:HG2_PB_SVrefine2PB10Xhap12_13414:HG2_PB_SVrefine2Falcon2Bionano_9033:HG2_PB_SVrefine2Falcon1plusDovetail_5834:HG2_Ill_SVrefine2DISCOVARplusDovetail_6251;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12821:HG4_PB_SVrefine2PBcRDovetail_9220:HG4_Ill_SVrefine2DISCOVARDovetail_12761:HG3_PB_SVrefine2PBcRDovetail_8988:HG3_Ill_SVrefine2DISCOVARDovetail_12966:HG2_PB_SVrefine2PBcRplusDovetail_5383:HG2_PB_SVrefine2PB10Xhap12_13414:HG2_PB_SVrefine2Falcon2Bionano_9033:HG2_PB_SVrefine2Falcon1plusDovetail_5834:HG2_Ill_SVrefine2DISCOVARplusDovetail_6251;NumExactMatchSVs=10;ClusterMaxShiftDist=0.016;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.064;PBcalls=11;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-125;DistBack=30875;DistForward=-39;DistMin=-39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=192;REFWIDENED=19:58567914-58568230;PctSeqSimilarity=0.9655;PctSizeSimilarity=0.992;PctRecOverlap=0.8254;SizeDiff=1;StartDistance=-22;EndDistance=-21;GTMatch=0;TruScore=92;MatchId=1827.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:57:1/1:5:24:0:22:0/0:13:0:10:1:0/1:24:14:./.:.:.:.:.:.
chr19	58617769	HG2_PB_SVrefine2Falcon2Bionano_9034	AAAAGAAAAAAAGACATCTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAGAAAG	A	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9221:HG3_Ill_manta_3973:HG2_Ill_manta_4867:HG4_PB_pbsv_18300:HG2_PB_HySA_33281:HG3_PB_HySA_27474:HG2_10X_allpass_2811:HG2_PB_pbsv_18386:HG4_PB_assemblyticsfalcon_12685:HG3_PB_assemblyticsfalcon_12888:HG2_PB_assemblyticsPBcR_12461:HG2_PB_assemblyticsfalcon_12860:HG3_Ill_Krunchall_23870:HG2_Ill_Krunchall_24317:HG3_PB_pbsv_18075:HG4_PB_HySA_26553:HG4_PB_SVrefine2Falcon1Dovetail_11423:HG4_Ill_SVrefine2DISCOVARDovetail_12762:HG4_Ill_GATKHCSBGrefine_12386:HG4_10X_allpass_3308:HG3_PB_SVrefine2PBcRDovetail_8989:HG3_PB_SVrefine2Falcon1Dovetail_11395:HG3_Ill_scalpel_17327:HG3_Ill_SVrefine2DISCOVARDovetail_12967:HG3_Ill_GATKHCSBGrefine_11840:HG3_10X_allpass_3447:HG2_PB_SVrefine2PBcRplusDovetail_5384:HG2_PB_SVrefine2PB10Xhap12_13415:HG2_PB_SVrefine2Falcon2Bionano_9034:HG2_PB_SVrefine2Falcon1plusDovetail_5835:HG2_Ill_SVrefine2DISCOVARplusDovetail_6252:HG2_Ill_GATKHCSBGrefine_11981:HG2_10X_SVrefine210Xhap12_12822:HG2_Ill_tnscope_1930;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12822:HG2_Ill_GATKHCSBGrefine_11981:HG2_Ill_SVrefine2DISCOVARplusDovetail_6252:HG2_PB_SVrefine2Falcon1plusDovetail_5835:HG2_PB_SVrefine2Falcon2Bionano_9034:HG2_PB_SVrefine2PB10Xhap12_13415:HG2_PB_SVrefine2PBcRplusDovetail_5384:HG3_10X_allpass_3447:HG3_Ill_GATKHCSBGrefine_11840:HG3_Ill_SVrefine2DISCOVARDovetail_12967:HG3_Ill_scalpel_17327:HG3_PB_SVrefine2Falcon1Dovetail_11395:HG3_PB_SVrefine2PBcRDovetail_8989:HG4_10X_allpass_3308:HG4_Ill_GATKHCSBGrefine_12386:HG4_Ill_SVrefine2DISCOVARDovetail_12762:HG4_PB_SVrefine2Falcon1Dovetail_11423;NumExactMatchSVs=17;ClusterMaxShiftDist=0.134557;ClusterMaxSizeDiff=0.134557;ClusterMaxEditDist=0.134557;PBcalls=18;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-331;DistBack=-358;DistForward=-313;DistMin=-358;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=19:58617770-58618119;PctSeqSimilarity=0.9379;PctSizeSimilarity=0.9735;PctRecOverlap=0.9238;SizeDiff=-9;StartDistance=-17;EndDistance=-26;GTMatch=0;TruScore=94;MatchId=1828.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:53:1/1:2:11:0:25:1/1:0:7:0:12:1/1:0:23:0/1:3:9:.:.:.
chr19	58921886	HG2_PB_SVrefine2Falcon2Bionano_9037	ATATATATATATATATATATATATATATATATATATATATGTGTATATATATATGTATATATATGTATATATATGTATATATATGTATATATATGTGTATATATGTGTATATATGTGTATATATATGTGTATATATGTGTATATATGTATATATGTGTATATATATGTATATATGTATATATATATGTATATATGTGTATATATATATGTATATATATATATGTGTGTATATATATATATATATG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_18390:HG2_PB_HySA_33287:HG3_PB_pbsv_18080:HG3_Ill_SVrefine2DISCOVARDovetail_12970:HG2_PB_SVrefine2Falcon2Bionano_9037;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9037:HG3_Ill_SVrefine2DISCOVARDovetail_12970;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0289855;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.0414938;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-244;DistBack=4876;DistForward=-223;DistMin=-223;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=19:58921887-58922144;PctSeqSimilarity=0.9724;PctSizeSimilarity=0.9959;PctRecOverlap=0.9102;SizeDiff=1;StartDistance=-22;EndDistance=-21;GTMatch=0;TruScore=95;MatchId=1829.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:19:0|1:25:1:0:17:./.:1:11:39:0:0/1:27:4:./.:.:.:.:.:.
chr19	59035205	HG4_Ill_GATKHCSBGrefine_12392	TTTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATATGGACTCCATCTTTAAAAATATATATATATAGAAAAATTAGCTGG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_18306:HG4_PB_HySA_26558:HG3_PB_HySA_27485:HG2_PB_HySA_33292:HG4_PB_SVrefine2PBcRDovetail_9223:HG4_PB_SVrefine2Falcon1Dovetail_11427:HG4_Ill_svaba_22457:HG4_Ill_scalpel_16609:HG4_Ill_manta_4135:HG4_Ill_SVrefine2DISCOVARDovetail_12764:HG4_Ill_Krunchall_24641:HG4_Ill_GATKHC_28806:HG4_Ill_GATKHCSBGrefine_12392:HG4_Ill_150bpfermikitraw_22716:HG4_CG_vcfBeta_11339:HG4_10X_allpass_3309:HG3_PB_SVrefine2PBcRDovetail_8993:HG3_PB_SVrefine2Falcon1Dovetail_11398:HG3_Ill_svaba_22711:HG3_Ill_scalpel_17334:HG3_Ill_manta_3977:HG3_Ill_SVrefine2DISCOVARDovetail_12971:HG3_Ill_Krunchall_23874:HG3_Ill_GATKHC_28734:HG3_Ill_GATKHCSBGrefine_11847:HG2_PB_assemblyticsfalcon_12867:HG2_PB_SVrefine2PBcRplusDovetail_5388:HG2_PB_SVrefine2PB10Xhap12_13420:HG2_PB_SVrefine2Falcon2Bionano_9039:HG2_PB_SVrefine2Falcon1plusDovetail_5840:HG2_Ill_svaba_22492:HG2_Ill_scalpel_16984:HG2_Ill_manta_4870:HG2_Ill_SVrefine2DISCOVARplusDovetail_6256:HG2_Ill_Krunchall_24321:HG2_Ill_GATKHC_28818:HG2_Ill_GATKHCSBGrefine_11988:HG2_Ill_150bpfermikitraw_22598:HG2_CG_vcfBeta_10317:HG2_10X_allpass_2812:HG2_Ill_breakscan11_2635:HG4_PB_assemblyticsfalcon_12690:HG3_PB_assemblyticsfalcon_12896:HG2_PB_assemblyticsPBcR_12467:HG3_PB_pbsv_18085:HG2_PB_pbsv_18394;NumClusterSVs=46;ExactMatchIDs=HG2_10X_allpass_2812:HG2_CG_vcfBeta_10317:HG2_Ill_150bpfermikitraw_22598:HG2_Ill_GATKHCSBGrefine_11988:HG2_Ill_GATKHC_28818:HG2_Ill_Krunchall_24321:HG2_Ill_SVrefine2DISCOVARplusDovetail_6256:HG2_Ill_manta_4870:HG2_Ill_scalpel_16984:HG2_Ill_svaba_22492:HG2_PB_SVrefine2Falcon1plusDovetail_5840:HG2_PB_SVrefine2Falcon2Bionano_9039:HG2_PB_SVrefine2PB10Xhap12_13420:HG2_PB_SVrefine2PBcRplusDovetail_5388:HG2_PB_assemblyticsfalcon_12867:HG3_Ill_GATKHCSBGrefine_11847:HG3_Ill_GATKHC_28734:HG3_Ill_Krunchall_23874:HG3_Ill_SVrefine2DISCOVARDovetail_12971:HG3_Ill_manta_3977:HG3_Ill_scalpel_17334:HG3_Ill_svaba_22711:HG3_PB_SVrefine2Falcon1Dovetail_11398:HG3_PB_SVrefine2PBcRDovetail_8993:HG4_10X_allpass_3309:HG4_CG_vcfBeta_11339:HG4_Ill_150bpfermikitraw_22716:HG4_Ill_GATKHCSBGrefine_12392:HG4_Ill_GATKHC_28806:HG4_Ill_Krunchall_24641:HG4_Ill_SVrefine2DISCOVARDovetail_12764:HG4_Ill_manta_4135:HG4_Ill_scalpel_16609:HG4_Ill_svaba_22457:HG4_PB_SVrefine2Falcon1Dovetail_11427:HG4_PB_SVrefine2PBcRDovetail_9223;NumExactMatchSVs=36;ClusterMaxShiftDist=0.0212766;ClusterMaxSizeDiff=0.0210526;ClusterMaxEditDist=0.0531915;PBcalls=18;Illcalls=24;TenXcalls=2;CGcalls=2;PBexactcalls=9;Illexactcalls=23;TenXexactcalls=2;CGexactcalls=2;HG2count=19;HG3count=12;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-94;DistBack=21000;DistForward=15013;DistMin=15013;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=19:59035206-59035299;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=1831.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:42:1/1:2:22:0:13:1/1:0:12:0:22:1/1:0:9:./.:.:.:.:.:.
chr20	373683	HG4_Ill_manta_4136	TTTTATCTTGAAATAATTTTAGACTTTTAGAAAACCTACAAAAATAGTTCAAAGAGTTTCTGCATATCCTTTAACCAGTGCTCTCCAATGTTAACACCTGACGTAGCTATGGTACAATTACCCAA	AAGGGGTGTTAGTGGGTACTAAGAAGTCAACCTTGGTAGAGT	20	PASS	ClusterIDs=HG2_Ill_Cortex_4809:HG4_PB_SVrefine2Falcon1Dovetail_11431:HG4_Ill_manta_4136:HG3_Ill_manta_3978:HG2_Ill_manta_4871:HG3_Ill_Spiral_18538:HG2_Ill_Spiral_1187:HG4_Ill_Spiral_1407:HG2_Ill_SpiralSDKrefine_9627:HG3_PB_HySA_27493:HG4_PB_pbsv_18310:HG2_PB_pbsv_18401:HG4_PB_assemblyticsfalcon_14902:HG4_Ill_Cortex_2043:HG3_Ill_Cortex_2080;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_manta_4871:HG3_Ill_manta_3978:HG4_Ill_manta_4136:HG4_PB_SVrefine2Falcon1Dovetail_11431;NumExactMatchSVs=4;ClusterMaxShiftDist=0.271739;ClusterMaxSizeDiff=0.271739;ClusterMaxEditDist=0.301508;PBcalls=5;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-83;DistBack=-123;DistForward=-103;DistMin=-123;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=20:373682-373808;PctSeqSimilarity=0.8938;PctSizeSimilarity=0.83;PctRecOverlap=0.808;SizeDiff=-17;StartDistance=-24;EndDistance=0;GTMatch=0;TruScore=84;MatchId=2185.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:33:0|1:36:8:0:22:1|0:0:30:39:0:0/1:32:12:./.:.:.:.:.:.
chr20	594427	HG2_PB_assemblyticsfalcon_15151	TGTGTGCTGAGTCCAGCTCAAGTCCCTTGGTTCCCACTGCTGCTAAGCATGCACG	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2639:HG3_PB_pbsv_18093:HG2_PB_pbsv_18403:HG4_PB_assemblyticsfalcon_14904:HG2_PB_assemblyticsPBcR_14747:HG4_PB_pbsv_18312:HG4_PB_HySA_26563:HG2_PB_HySA_33307:HG4_PB_SVrefine2PBcRDovetail_9226:HG4_PB_SVrefine2Falcon1Dovetail_11433:HG4_Ill_svaba_22461:HG4_Ill_scalpel_16611:HG4_Ill_manta_4137:HG4_Ill_SVrefine2DISCOVARDovetail_12765:HG4_Ill_Krunchall_24644:HG4_Ill_GATKHC_28808:HG4_Ill_GATKHCSBGrefine_12395:HG4_Ill_Cortex_2044:HG4_Ill_250bpfermikitraw_23603:HG4_Ill_150bpfermikitraw_22718:HG3_PB_assemblyticsfalcon_15143:HG3_PB_SVrefine2PBcRDovetail_9000:HG3_Ill_svaba_22718:HG3_Ill_scalpel_17339:HG3_Ill_manta_3979:HG3_Ill_SVrefine2DISCOVARDovetail_12975:HG3_Ill_Krunchall_23881:HG3_Ill_GATKHC_28741:HG3_Ill_GATKHCSBGrefine_11851:HG3_Ill_Cortex_2081:HG3_Ill_250bpfermikitraw_23311:HG3_Ill_150bpfermikitraw_22621:HG2_PB_assemblyticsfalcon_15151:HG2_PB_SVrefine2PBcRplusDovetail_6303:HG2_PB_SVrefine2PB10Xhap12_13428:HG2_PB_SVrefine2Falcon2Bionano_9044:HG2_Ill_svaba_22498:HG2_Ill_scalpel_16989:HG2_Ill_manta_4872:HG2_Ill_SpiralSDKrefine_9628:HG2_Ill_SVrefine2DISCOVARplusDovetail_7401:HG2_Ill_Krunchall_24327:HG2_Ill_GATKHC_28824:HG2_Ill_GATKHCSBGrefine_11992:HG2_Ill_Cortex_4810:HG2_Ill_250bpfermikitraw_23991:HG2_Ill_150bpfermikitraw_22601:HG2_10X_SVrefine210Xhap12_12831;NumClusterSVs=48;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12831:HG2_Ill_150bpfermikitraw_22601:HG2_Ill_250bpfermikitraw_23991:HG2_Ill_Cortex_4810:HG2_Ill_GATKHCSBGrefine_11992:HG2_Ill_GATKHC_28824:HG2_Ill_Krunchall_24327:HG2_Ill_SVrefine2DISCOVARplusDovetail_7401:HG2_Ill_SpiralSDKrefine_9628:HG2_Ill_manta_4872:HG2_Ill_scalpel_16989:HG2_Ill_svaba_22498:HG2_PB_SVrefine2Falcon2Bionano_9044:HG2_PB_SVrefine2PB10Xhap12_13428:HG2_PB_SVrefine2PBcRplusDovetail_6303:HG2_PB_assemblyticsfalcon_15151:HG3_Ill_150bpfermikitraw_22621:HG3_Ill_250bpfermikitraw_23311:HG3_Ill_Cortex_2081:HG3_Ill_GATKHCSBGrefine_11851:HG3_Ill_GATKHC_28741:HG3_Ill_Krunchall_23881:HG3_Ill_SVrefine2DISCOVARDovetail_12975:HG3_Ill_manta_3979:HG3_Ill_scalpel_17339:HG3_Ill_svaba_22718:HG3_PB_SVrefine2PBcRDovetail_9000:HG3_PB_assemblyticsfalcon_15143:HG4_Ill_150bpfermikitraw_22718:HG4_Ill_250bpfermikitraw_23603:HG4_Ill_Cortex_2044:HG4_Ill_GATKHCSBGrefine_12395:HG4_Ill_GATKHC_28808:HG4_Ill_Krunchall_24644:HG4_Ill_SVrefine2DISCOVARDovetail_12765:HG4_Ill_manta_4137:HG4_Ill_scalpel_16611:HG4_Ill_svaba_22461:HG4_PB_SVrefine2Falcon1Dovetail_11433:HG4_PB_SVrefine2PBcRDovetail_9226:HG4_PB_pbsv_18312;NumExactMatchSVs=41;ClusterMaxShiftDist=0.209524;ClusterMaxSizeDiff=0.209524;ClusterMaxEditDist=0.209524;PBcalls=15;Illcalls=32;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=31;TenXexactcalls=1;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=15;NumTechs=3;NumTechsExact=3;SVLEN=-54;DistBack=85173;DistForward=28028;DistMin=28028;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=20:594428-594487;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2186.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:70:1/1:3:40:0:23:1/1:0:19:0:23:1/1:0:49:./.:.:.:.:.:.
chr20	930159	HG4_Ill_250bpfermikitraw_23609	CTCTGAAGAGGTAACATTTGAACTGAGATGTAGAGGGAGAGAAGGAACTAGCCATGTGGAGATCTGGGGGAGGAGCATTCCAGGCAGAGGGGATAGCAAGTGCA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12833:HG4_PB_pbsv_18318:HG2_PB_pbsv_18409:HG4_PB_HySA_26567:HG2_PB_HySA_33318:HG4_PB_SVrefine2PBcRDovetail_9230:HG4_Ill_SVrefine2DISCOVARDovetail_12767:HG4_Ill_250bpfermikitraw_23609:HG4_Ill_150bpfermikitraw_22724:HG2_PB_SVrefine2PBcRplusDovetail_6308:HG2_PB_SVrefine2PB10Xhap12_13434:HG2_PB_SVrefine2Falcon2Bionano_9049:HG2_Ill_SpiralSDKrefine_9632;NumClusterSVs=13;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12833:HG4_PB_SVrefine2PBcRDovetail_9230:HG4_Ill_SVrefine2DISCOVARDovetail_12767:HG4_Ill_250bpfermikitraw_23609:HG4_Ill_150bpfermikitraw_22724:HG2_PB_SVrefine2PBcRplusDovetail_6308:HG2_PB_SVrefine2PB10Xhap12_13434:HG2_PB_SVrefine2Falcon2Bionano_9049:HG2_Ill_SpiralSDKrefine_9632;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0192308;ClusterMaxSizeDiff=0.0192308;ClusterMaxEditDist=0.0194175;PBcalls=8;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-103;DistBack=37672;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=103;REFWIDENED=20:930160-930365;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2187.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:37:0|1:20:6:2:27:1|0:0:7:16:1:0/1:18:16:./.:.:.:.:.:.
chr20	1995501	HG2_PB_SVrefine2Falcon1plusDovetail_6809	TACCAATCTCTAGAGTAAAAGTATTGGAATATTACTACAGACCACACAGACATAAATGGATAATAAAAAATACTATGAACAAATCTATCCACTTAAATTTGACAACTTAGCTGAAATGGGCCTATTTCTTGAAAGCCACAAACTATCAAGACTCACCCAAGAAGAAATAGATGACCTAAATATTCCCATGTCCATTACAAAACCAAATTAATATTAATAGTTAAAAACATTCAATAATATAACTCCAAACTCATACATATGGTTTCAACAAAATATCAGCAAATCATGTACAGTCATGCACCACGTAACAACCTTTTGGTCAATAATGGACCAAGTATACAACGGTGGTCTCATAAGATTATAGAGACGAAAAATTCCTATTACTAGTGGTGTTATAGCCATCCTAATGTCATAGTGAAACACCTTACTAACATGTTTGTGTGGATGCTGGCATAAACAAGCCTATAGCACTGCCAATCATATTAAAGTATAGCAGTACAATTATGTACAGTACATAACATGTGGTAATGATAATAAAAGACTATGTTATTGGTGTACATGTTCATTATGCTATATTTTTAATCCTTATTTTAAAGTGCACTTCTACTACTTATTTTTAAAAAGTTAACTTTAGGCCGGGCGCGATGGCTCATGCCTGTGATCCCAGCACTTTGGGAGGCCGAGGAGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCTTGGTGGCGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCTGAGCTTGCAGTGAGCCCAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATATAAAAAATTTACTTTAAAACAGCCTCAGGCAAATCTTTCAGGAAGTATTATAGAAGAAGGCACTGTTATCGTAGGAGATGACAGCTCCACACGTGTTATTGCCCCTGAACACCTCCCGCTGCAACAAGATGCGGAAGTGGAAGACAGTGACACTGATGATCGTGACCATGTGTAGCCCTAGGCTAATATAGGTGCTATGTTTTAATTTTTAACAAAAAAGTTTTAAAAAATAAAAATTTTAAAAAAGTGAATAGAATGAAAATATAAAGAAAGAAAATATTTTTGCACAAACGTGCGATGTGTTTTAGGCTGTTATTTCAAAAGAGTCAAAAAGTTTTTTAAATTAAAAAGGCTATAGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCTGAGGCGGAGGGATCACCTGAGGTCGGGAATTCGAGACCAGGATGACCAACATGGAGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCCAAGCGTGGTGGCACATGCCTCTAATCCCAGCTACTCTGGAGGTTGAGACAGGAGAATCGCTTGAACCCGGGAGGAGGTTGCAGTGAGCCAAGATCGCGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAAGTCCATCTCAAAAATAAAAAATAAATAAAAATAAAAAGTTTATGTTACAGTGAGCTAAGGGTTAATTAATTATGGAAGAAAGAAAAATGATTTTTATAAATTTCGTAGCCTAAGTGTATAGTGTTTACAAAGTTCACAGTCATGTGCAGTAATGCCATTCACATTCACATTCACTGAACACTCACTCACTGACTCACCCAGAGCAACTTACAGTCCTGCAAGCTCCATTCATGAGAAGTGCCCTATACAGGTGTATTTTTTTTTAATCTTTTATACTCTATTTTTACAGTACCTTTTTTATGTTTAGAAATATTTAGATACACAAACACCATTGTGTTAAAACTGCCTGCAGCATTCAGTACAGTAACATATTATACAGGTTTGTAGCCTCAGAGCAATAAACTATACCATACATAATAGTGTGCAGTAGGCTATA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_18333:HG4_PB_SVrefine2PBcRDovetail_9238:HG2_Ill_tnscope_1931:HG4_Ill_SVrefine2DISCOVARDovetail_12774:HG4_10X_allpass_3311:HG3_PB_assemblyticsfalcon_15161:HG3_PB_SVrefine2Falcon1Dovetail_11415:HG2_PB_pbsv_18421:HG2_PB_assemblyticsfalcon_15171:HG2_PB_SVrefine2PB10Xhap12_13444:HG2_PB_SVrefine2Falcon1plusDovetail_6809:HG2_Ill_breakscan11_2641:HG2_Ill_GATKHCSBGrefine_11996:HG2_10X_SVrefine210Xhap12_12839:HG2_10X_allpass_2815:HG4_Ill_MetaSV_2918:HG2_Ill_MetaSV_2825:HG4_Ill_Krunchall_24655:HG2_Ill_Krunchall_24338;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12839:HG2_Ill_GATKHCSBGrefine_11996:HG2_Ill_breakscan11_2641:HG2_PB_SVrefine2Falcon1plusDovetail_6809:HG2_PB_SVrefine2PB10Xhap12_13444:HG2_PB_assemblyticsfalcon_15171:HG2_PB_pbsv_18421:HG3_PB_SVrefine2Falcon1Dovetail_11415:HG3_PB_assemblyticsfalcon_15161:HG4_10X_allpass_3311:HG4_Ill_SVrefine2DISCOVARDovetail_12774;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00246245;ClusterMaxSizeDiff=0.00246245;ClusterMaxEditDist=0.00344828;PBcalls=8;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-2031;DistBack=-1;DistForward=-2031;DistMin=-2031;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=20:1995502-1997532;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2188.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:61:56:0|1:59:0:0:38:1|0:0:40:74:0:0/1:58:15:0/1:205:80:2089:.:.
chr20	2803147	HG4_Ill_SVrefine2DISCOVARDovetail_12782	TAAAAGAACTTGATTTGCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCGTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCGTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCGTCTCCCTCCACGGTCTCCCTCTGATGCCGAGCCAAAGCTGGACGGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCACACCTGACTGGTTTTCGGTTTTTTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCTGCTCTCCAGCTCCTAACCGCGAGTGATCTGCCAGCCTCGGCATCCTGAGGTGCCGGGATTGCAGACGGAGTCTCGTTCACTCAGTGCTCAGTGGTGTCCAGGCTGGAGTGCAGTGGCGTGATCTCCGCTCGCTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGAGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCTTGGCCACCCATCGTCTGGGATATGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCGCCATCCCATCTAGGAAGCGAGGAGCGCCTCTTCCCGGCTGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCACCTCTGCCCCACCGCCCTGTCTGGGATGTGAGGAGCGCCTCTGCTGGGCCGCAACCCTGTCTGGGAGGTGAGGAGCGTCTCTGCCCCGCCGCTCCGTCTGAGAAGTGAGGAAACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGTCCGGCAACCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCTCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAACCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGCCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCTCGTCCGGGAGGGGGGAGGGGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCACCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAAACCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCACCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGACCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGAACAGCCCCCCGCCCGGCCAGCCGCCCTATCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGCGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCTGGGAGGTGAGGGGCACTTCTGCCGGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACGACCCCGTCTGGGAGGTGTGCCCAGCGGCTCATTGGGGATGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAGGCGGGAAGGGTGGGGAAAAAATTGAGAAATCGGATGGTTGCTGGGTCTGTGTGGATAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGTACTAAGAAAAATTCTTCTGCCTTGGGATCCTGTTGATCTGTGACCTTATCCCCAACCCTGTGCTCTCTGAGACATGTGCTGTGTCCACTCAGGGTTAGATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTGAACAGATGCTTGAGGGCAGCATGCTCGTTGAGAGTCATCACCACTCCCTAATCTTAAGTACCCAGGGACACAAACGCTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCTATGACCCTGCCAAATCCCCCTCTGCGAGAAACACCCAAGAATGATCAATAAAAATAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2642:HG4_10X_allpass_3312:HG4_PB_assemblyticsfalcon_14929:HG3_PB_assemblyticsfalcon_15169:HG2_PB_assemblyticsfalcon_15177:HG2_PB_assemblyticsPBcR_14771:HG2_10X_allpass_2816:HG3_PB_pbsv_18117:HG3_Ill_Krunchall_23904:HG2_Ill_Krunchall_24348:HG4_Ill_MetaSV_2921:HG2_Ill_tnscope_1932:HG4_PB_pbsv_18338:HG4_PB_SVrefine2PBcRDovetail_9240:HG4_Ill_SVrefine2DISCOVARDovetail_12782:HG4_Ill_GATKHCSBGrefine_12402:HG3_Ill_MetaSV_2975:HG3_Ill_GATKHCSBGrefine_11863:HG2_PB_pbsv_18425:HG2_PB_SVrefine2PBcRplusDovetail_6317:HG2_PB_SVrefine2PB10Xhap12_13446:HG2_PB_SVrefine2Falcon2Bionano_9059:HG2_PB_SVrefine2Falcon1plusDovetail_6811:HG2_Ill_SVrefine2DISCOVARplusDovetail_7412:HG2_Ill_MetaSV_2826:HG2_Ill_GATKHCSBGrefine_12001:HG2_10X_SVrefine210Xhap12_12844;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12844:HG2_Ill_GATKHCSBGrefine_12001:HG2_Ill_MetaSV_2826:HG2_Ill_SVrefine2DISCOVARplusDovetail_7412:HG2_PB_SVrefine2Falcon1plusDovetail_6811:HG2_PB_SVrefine2Falcon2Bionano_9059:HG2_PB_SVrefine2PB10Xhap12_13446:HG2_PB_SVrefine2PBcRplusDovetail_6317:HG2_PB_pbsv_18425:HG3_Ill_GATKHCSBGrefine_11863:HG3_Ill_MetaSV_2975:HG4_Ill_GATKHCSBGrefine_12402:HG4_Ill_SVrefine2DISCOVARDovetail_12782:HG4_PB_SVrefine2PBcRDovetail_9240:HG4_PB_pbsv_18338;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00890663;ClusterMaxSizeDiff=0.00890663;ClusterMaxEditDist=0.00890663;PBcalls=12;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3262;DistBack=14082;DistForward=-3242;DistMin=-3242;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=20:2803148-2806424;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2189.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:92:1/1:2:27:0:18:1/1:0:26:0:17:1/1:0:39:1/1:2:213:3333:.:.
chr20	2864001	HG2_PB_SVrefine2PB10Xhap12_13450	TAGAAAGAAATGTGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCCACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12847:HG4_Ill_Krunchall_24665:HG2_Ill_Krunchall_24349:HG2_PB_HySA_33344:HG4_PB_assemblyticsfalcon_14933:HG2_PB_assemblyticsfalcon_15180:HG2_PB_assemblyticsPBcR_14774:HG2_PB_pbsv_18427:HG3_PB_pbsv_18120:HG2_Ill_breakscan11_2643:HG2_Ill_tnscope_1933:HG2_Ill_MetaSV_2828:HG4_PB_pbsv_18343:HG4_PB_SVrefine2Falcon1Dovetail_11447:HG4_Ill_manta_4141:HG4_Ill_SVrefine2DISCOVARDovetail_12784:HG4_Ill_GATKHCSBGrefine_12404:HG4_10X_allpass_3313:HG3_Ill_SVrefine2DISCOVARDovetail_12985:HG3_Ill_MetaSV_2976:HG3_Ill_GATKHCSBGrefine_11864:HG3_10X_allpass_3452:HG2_PB_SVrefine2PBcRplusDovetail_6320:HG2_PB_SVrefine2PB10Xhap12_13450:HG2_PB_SVrefine2Falcon2Bionano_9062:HG2_PB_SVrefine2Falcon1plusDovetail_6814:HG2_Ill_scalpel_17008:HG2_Ill_manta_4877:HG2_Ill_SVrefine2DISCOVARplusDovetail_7414:HG2_Ill_GATKHCSBGrefine_12002:HG2_10X_allpass_2817;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12847:HG4_PB_pbsv_18343:HG4_PB_SVrefine2Falcon1Dovetail_11447:HG4_Ill_manta_4141:HG4_Ill_SVrefine2DISCOVARDovetail_12784:HG4_Ill_GATKHCSBGrefine_12404:HG4_10X_allpass_3313:HG3_Ill_SVrefine2DISCOVARDovetail_12985:HG3_Ill_MetaSV_2976:HG3_Ill_GATKHCSBGrefine_11864:HG3_10X_allpass_3452:HG2_PB_SVrefine2PBcRplusDovetail_6320:HG2_PB_SVrefine2PB10Xhap12_13450:HG2_PB_SVrefine2Falcon2Bionano_9062:HG2_PB_SVrefine2Falcon1plusDovetail_6814:HG2_Ill_scalpel_17008:HG2_Ill_manta_4877:HG2_Ill_SVrefine2DISCOVARplusDovetail_7414:HG2_Ill_GATKHCSBGrefine_12002:HG2_10X_allpass_2817;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0916272;ClusterMaxSizeDiff=0.0916272;ClusterMaxEditDist=0.0916272;PBcalls=12;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=-191;DistForward=26730;DistMin=-191;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=20:2864002-2864338;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2190.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:60:./.:6:13:0:18:1/1:0:18:0:6:1/1:0:40:./.:2:9:.:.:.
chr20	2950208	HG2_10X_SVrefine210Xhap12_12850	ATAAATAAATAGGCCGGGCGCGGCGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACGAGGTCAGGAGATCAAGACCCTCCTGGCTAACATGGTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12850:HG4_PB_pbsv_18344:HG3_PB_pbsv_18121:HG3_PB_HySA_27533:HG2_PB_assemblyticsfalcon_15181:HG2_PB_SVrefine2Falcon1plusDovetail_6815:HG2_PB_HySA_33346:HG2_PB_pbsv_18428:HG4_Ill_MetaSV_2924:HG3_Ill_MetaSV_2977:HG4_PB_assemblyticsfalcon_14934:HG4_PB_SVrefine2PBcRDovetail_9244:HG4_PB_SVrefine2Falcon1Dovetail_11448:HG4_PB_HySA_26592:HG4_Ill_SVrefine2DISCOVARDovetail_12786:HG3_PB_SVrefine2Falcon1Dovetail_11420:HG3_Ill_SVrefine2DISCOVARDovetail_12987:HG2_PB_SVrefine2PBcRplusDovetail_6321:HG2_PB_SVrefine2PB10Xhap12_13451:HG2_PB_SVrefine2Falcon2Bionano_9063:HG2_Ill_SpiralSDKrefine_9646:HG2_Ill_SVrefine2DISCOVARplusDovetail_7415:HG2_Ill_250bpfermikitraw_24016:HG2_Ill_150bpfermikitraw_22621;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12850:HG4_PB_assemblyticsfalcon_14934:HG4_PB_SVrefine2PBcRDovetail_9244:HG4_PB_SVrefine2Falcon1Dovetail_11448:HG4_PB_HySA_26592:HG4_Ill_SVrefine2DISCOVARDovetail_12786:HG3_PB_SVrefine2Falcon1Dovetail_11420:HG3_Ill_SVrefine2DISCOVARDovetail_12987:HG2_PB_SVrefine2PBcRplusDovetail_6321:HG2_PB_SVrefine2PB10Xhap12_13451:HG2_PB_SVrefine2Falcon2Bionano_9063:HG2_Ill_SpiralSDKrefine_9646:HG2_Ill_SVrefine2DISCOVARplusDovetail_7415:HG2_Ill_250bpfermikitraw_24016:HG2_Ill_150bpfermikitraw_22621;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0266667;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.0269058;PBcalls=15;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-112;DistBack=10717;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=112;REFWIDENED=20:2950209-2950432;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2191.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:43:./.:0:15:2:6:./.:0:8:0:3:1/1:0:34:./.:.:.:.:.:.
chr20	5534545	HG2_Ill_SVrefine2DISCOVARplusDovetail_7429	AGCTGCAGTTAAGGTATCCAGAAGGTCTTGCTAAGATCACTTAACAAAGTGGCTACATTGAACAACAGATTTTCTTTTCTTTTTTTTTAAGACAGAGTCTCGCTCTGTCACCCAGGCTGCAGTGCAGTGGTGTGATCTCTGCTCACTGCAAGCTCCGACTCCTCGGTTCAGGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTATTATTATTATTATTATTTTGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGACCTTGTGATCCGCTCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCATCAG	A	20	PASS	ClusterIDs=HG2_Ill_Krunchall_24372:HG2_PB_SVrefine2PB10Xhap12_13464:HG3_PB_pbsv_18137:HG2_PB_assemblyticsPBcR_14803:HG3_Ill_MetaSV_2983:HG2_Ill_tnscope_1936:HG4_PB_assemblyticsfalcon_14961:HG4_PB_SVrefine2Falcon1Dovetail_11456:HG3_PB_assemblyticsfalcon_15200:HG3_PB_SVrefine2PBcRDovetail_9008:HG3_PB_SVrefine2Falcon1Dovetail_11432:HG3_PB_HySA_27560:HG3_Ill_manta_3985:HG3_Ill_SVrefine2DISCOVARDovetail_12999:HG3_Ill_GATKHCSBGrefine_11871:HG3_10X_allpass_3454:HG2_PB_SVrefine2PBcRplusDovetail_6332:HG2_PB_SVrefine2PB10Xhap12_13463:HG2_PB_SVrefine2Falcon1plusDovetail_6830:HG2_Ill_manta_4881:HG2_Ill_breakscan11_2644:HG2_Ill_SpiralSDKrefine_9657:HG2_Ill_SVrefine2DISCOVARplusDovetail_7429:HG2_Ill_MetaSV_2835:HG2_Ill_GATKHCSBGrefine_12012:HG2_10X_allpass_2819:HG2_10X_SVrefine210Xhap12_12868:HG2_PB_pbsv_18446:HG2_PB_PB10Xdip_18434;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12868:HG2_10X_allpass_2819:HG2_Ill_GATKHCSBGrefine_12012:HG2_Ill_MetaSV_2835:HG2_Ill_SVrefine2DISCOVARplusDovetail_7429:HG2_Ill_SpiralSDKrefine_9657:HG2_Ill_breakscan11_2644:HG2_Ill_manta_4881:HG2_PB_SVrefine2Falcon1plusDovetail_6830:HG2_PB_SVrefine2PB10Xhap12_13463:HG2_PB_SVrefine2PBcRplusDovetail_6332:HG3_10X_allpass_3454:HG3_Ill_GATKHCSBGrefine_11871:HG3_Ill_SVrefine2DISCOVARDovetail_12999:HG3_Ill_manta_3985:HG3_PB_HySA_27560:HG3_PB_SVrefine2Falcon1Dovetail_11432:HG3_PB_SVrefine2PBcRDovetail_9008:HG3_PB_assemblyticsfalcon_15200:HG4_PB_SVrefine2Falcon1Dovetail_11456:HG4_PB_assemblyticsfalcon_14961;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0531915;ClusterMaxSizeDiff=0.0531915;ClusterMaxEditDist=0.0531915;PBcalls=14;Illcalls=12;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-376;DistBack=-23;DistForward=-375;DistMin=-375;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=20:5534546-5534923;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2192.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:46:0|1:39:1:2:43:0|1:48:0:0:26:0/1:59:20:0/1:33:10:.:.:.
chr20	5942987	HG3_Ill_MetaSV_2984	AGCCTTCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCCGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12871:HG2_Ill_breakscan11_2645:HG2_PB_assemblyticsPBcR_14809:HG4_PB_SVrefine2Falcon1Dovetail_11459:HG4_Ill_Krunchall_24694:HG2_PB_assemblyticsfalcon_15214:HG4_Ill_Spiral_1410:HG3_Ill_Spiral_18580:HG3_PB_HySA_27565:HG4_PB_pbsv_18368:HG4_Ill_MetaSV_2932:HG2_Ill_MetaSV_2837:HG4_PB_SVrefine2PBcRDovetail_9255:HG4_PB_SVrefine2Falcon1Dovetail_11458:HG4_PB_HySA_26619:HG4_Ill_SVrefine2DISCOVARDovetail_12811:HG4_Ill_GATKHCSBGrefine_12415:HG4_10X_allpass_3315:HG3_PB_pbsv_18141:HG3_Ill_scalpel_17384:HG3_Ill_manta_3986:HG3_Ill_SVrefine2DISCOVARDovetail_13003:HG3_Ill_MetaSV_2984:HG3_Ill_GATKHCSBGrefine_11873:HG3_10X_allpass_3455:HG2_PB_pbsv_18449:HG2_PB_SVrefine2PBcRplusDovetail_6336:HG2_PB_SVrefine2PB10Xhap12_13468:HG2_PB_SVrefine2Falcon2Bionano_9074:HG2_PB_SVrefine2Falcon1plusDovetail_6832:HG2_Ill_SpiralSDKrefine_9661:HG2_Ill_SVrefine2DISCOVARplusDovetail_7433:HG2_Ill_GATKHCSBGrefine_12015:HG2_10X_allpass_2820;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12871:HG4_PB_SVrefine2PBcRDovetail_9255:HG4_PB_SVrefine2Falcon1Dovetail_11458:HG4_PB_HySA_26619:HG4_Ill_SVrefine2DISCOVARDovetail_12811:HG4_Ill_GATKHCSBGrefine_12415:HG4_10X_allpass_3315:HG3_PB_pbsv_18141:HG3_Ill_scalpel_17384:HG3_Ill_manta_3986:HG3_Ill_SVrefine2DISCOVARDovetail_13003:HG3_Ill_MetaSV_2984:HG3_Ill_GATKHCSBGrefine_11873:HG3_10X_allpass_3455:HG2_PB_pbsv_18449:HG2_PB_SVrefine2PBcRplusDovetail_6336:HG2_PB_SVrefine2PB10Xhap12_13468:HG2_PB_SVrefine2Falcon2Bionano_9074:HG2_PB_SVrefine2Falcon1plusDovetail_6832:HG2_Ill_SpiralSDKrefine_9661:HG2_Ill_SVrefine2DISCOVARplusDovetail_7433:HG2_Ill_GATKHCSBGrefine_12015:HG2_10X_allpass_2820;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0772798;ClusterMaxSizeDiff=0.0772798;ClusterMaxEditDist=0.0772798;PBcalls=14;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-329;DistBack=21507;DistForward=-324;DistMin=-324;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=20:5942988-5943329;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2193.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:45:0|1:41:1:0:41:0|1:39:0:0:30:0/1:27:15:0/1:24:12:.:.:.
chr20	6025586	HG4_PB_SVrefine2Falcon1Dovetail_11460	GACATAGCTAGAATGGAAATGTTAGAATGAGAGTTCAATCAGTATTTTTGTGTGTGTGTGGAAAGGAAATGCTTTTCTTTTTCCCTGAAGTGGGAAAGGAAGAGGATTACATTTTTTTTCTTTGAGTAACACCGTTGAGTCCTTTACTTACATTGTCTCATATCAACTGGGGACAATATTCCCATGACTGATCGTTGTATCAAAAAGAATGTGTGTTGGCTGGGCACGGTGGCTCATACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATTATTTGAGGTTAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACTCTGTCTGTACTAAAAATACAAAAATTAGCCGGGCGGTAGTGGTGCACCTGTAATCCCAGTTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAGCCTGGGAGGCAGAGGTTGCGGTGAGCCAAGAGCACACCACTACCCTCCAGGATAGGCAGGAGAGTGAGACCCTGTCTCAAAAAATAAAACAAAACAAAACAAACAACAACAACAAAAACACACACACAAAAAAGAATGCATGATGATAAAAGTGTTTGTAAATGCAAATCTCCACATACAAATAGATATTGTTATTATGGACCAGTGTTATTGCACTGTGGCTGGTGACACTCAACACCAGTCCTTTGGAAGATGCCTCATTTAAGTGCATCAGTGAACTCTTGCTAAGTAGAGAGTATCCTCCAAACTTAGTAACTTAAAACAATAAATATTTATTCCTTTGCATGATTCTGTGGGTTGGCTCAGTGGTTCTTGTGGTCTGGATTAGCTCAGCTGGGGCCAGATGATCTGGGATGGCCTCATGTGTAAGCCTCAACTGGCTGTGCTGGGACTTCTCTCCATGTGTCTGTCATCACCCAGGAGGCTAGCCTGGGCTTATTCACATGGTAGTGGAGGGATCCCCAATAGCAGGAGAGGGCAGGCCCCAGTGCTCAATTGCTTTCTAGTTTCTGCTTACATCACATTTGCTAATATCCCACTGGCCCCAAGCAAATCACAAGGCCAAGCCCAGCTTCAAGAGGTAGAGCAATAGACTCCTTGAAATATGGGGCCTGGTGCAATGGCTCATGCCTGTAATCCTAGCCCTTTGGGAGGCCAAGGTGGGAGGATCATTTGAGGCCAGGAGTTTCAGACTAGCCTGGGAAACATAGCAAGACCCTGTCTCTACAAAAAAAATTTAACAATTGGCCAGGCATGGTGGAGTACACCTGTGGTCCCAGCTACTTGGGAGGCTGAGATGGGAGGATTGCTTGAGTTAGAGGTTACAGTGAGCCATGATTGTGCCACTGCACTCCAGCCTGGGGAGCAGAACTAGGCCTTGACTCTAAAGAATTGAAATTTAAAAATATATATATAGGAGGAGCTGCAGTCATGTTGCAAAGAGTTGTGCCTACAGGGATGGGGGGAATTACTGAGGCCATTTTTGCATAGAGTCTACCATACCTAGCAATGGCAGATCTGCTCCTGGCTCCCTTCTCTTTCTCACCCAGAGTCTCACAGAGTGTTTGGCCTTGACTTTCTCGACTCCCTGAGTCTCCTGGACCTCCCAGATTTTACCTCATTTACATGTACTCAGTGATAATTCATCATGGGCAATGGGAGCTGCATTTTACATTCAAGTCTCTTCTGACCAAAGGCTGGCTTTCCTCAGTCTGCCTGGGAACCTGCCCTTTACTACTCTGGAGAAGATGCTGTTGTTCTGGGAAAGGAAGGACATGTCACCCACATCTGCTCTATCACTTCTGGCCAGTAGGAAAGTGACAGTCACCCCTGGGACACCAGATTTATGTATGTGCCATTTATATTAAAACTTAAGCCATATGTGCATATACAAGTGTATATATGTATATATGCGTGTATGCTTGTTTTTGCAGATTTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12872:HG2_10X_allpass_2821:HG3_PB_SVrefine2Falcon1Dovetail_11434:HG3_PB_assemblyticsfalcon_15204:HG2_Ill_Krunchall_24378:HG4_10X_allpass_3316:HG4_Ill_MetaSV_2933:HG2_PB_pbsv_18450:HG4_PB_pbsv_18369:HG2_Ill_MetaSV_2838:HG4_PB_SVrefine2PBcRDovetail_9256:HG4_PB_SVrefine2Falcon1Dovetail_11460:HG4_Ill_SVrefine2DISCOVARDovetail_12813:HG2_PB_SVrefine2PBcRplusDovetail_6337:HG2_PB_SVrefine2PB10Xhap12_13470:HG2_Ill_SVrefine2DISCOVARplusDovetail_7434;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12872:HG4_PB_SVrefine2PBcRDovetail_9256:HG4_PB_SVrefine2Falcon1Dovetail_11460:HG4_Ill_SVrefine2DISCOVARDovetail_12813:HG2_PB_SVrefine2PBcRplusDovetail_6337:HG2_PB_SVrefine2PB10Xhap12_13470:HG2_Ill_SVrefine2DISCOVARplusDovetail_7434;NumExactMatchSVs=7;ClusterMaxShiftDist=0.129101;ClusterMaxSizeDiff=0.129101;ClusterMaxEditDist=0.129101;PBcalls=8;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-1917;DistBack=0;DistForward=-1805;DistMin=-1805;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=161;REFWIDENED=20:6025587-6027664;PctSeqSimilarity=0.9955;PctSizeSimilarity=1;PctRecOverlap=0.9432;SizeDiff=0;StartDistance=-109;EndDistance=-109;GTMatch=0;TruScore=97;MatchId=2194.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:37:0|1:39:2:1:24:./.:1:18:47:0:0/1:46:16:0/1:152:56:1811:.:.
chr20	6150945	HG2_Ill_manta_4882	TAAGAGTGGACATCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTGAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1190:HG2_Ill_Krunchall_24380:HG4_PB_assemblyticsfalcon_14965:HG3_PB_assemblyticsfalcon_15206:HG2_PB_assemblyticsfalcon_15216:HG2_PB_assemblyticsPBcR_14812:HG4_PB_pbsv_18370:HG3_PB_pbsv_18143:HG2_PB_pbsv_18451:HG4_Ill_MetaSV_2934:HG3_Ill_MetaSV_2986:HG2_Ill_tnscope_1937:HG2_Ill_MetaSV_2839:HG4_PB_SVrefine2PBcRDovetail_9257:HG4_PB_SVrefine2Falcon1Dovetail_11461:HG4_Ill_scalpel_16655:HG4_Ill_manta_4147:HG4_Ill_SVrefine2DISCOVARDovetail_12814:HG4_Ill_GATKHCSBGrefine_12416:HG4_10X_allpass_3317:HG3_PB_SVrefine2PBcRDovetail_9011:HG3_PB_SVrefine2Falcon1Dovetail_11436:HG3_Ill_manta_3987:HG3_Ill_SVrefine2DISCOVARDovetail_13006:HG3_Ill_GATKHCSBGrefine_11875:HG3_10X_allpass_3456:HG2_PB_SVrefine2PBcRplusDovetail_6338:HG2_PB_SVrefine2PB10Xhap12_13471:HG2_PB_SVrefine2Falcon2Bionano_9075:HG2_PB_SVrefine2Falcon1plusDovetail_6833:HG2_PB_HySA_33381:HG2_Ill_scalpel_17035:HG2_Ill_manta_4882:HG2_Ill_breakscan11_2646:HG2_Ill_SVrefine2DISCOVARplusDovetail_7435:HG2_Ill_GATKHCSBGrefine_12016:HG2_10X_allpass_2822:HG2_10X_SVrefine210Xhap12_12873:HG4_Ill_Spiral_1411:HG3_Ill_Spiral_18581;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12873:HG2_10X_allpass_2822:HG2_Ill_GATKHCSBGrefine_12016:HG2_Ill_SVrefine2DISCOVARplusDovetail_7435:HG2_Ill_breakscan11_2646:HG2_Ill_manta_4882:HG2_Ill_scalpel_17035:HG2_PB_HySA_33381:HG2_PB_SVrefine2Falcon1plusDovetail_6833:HG2_PB_SVrefine2Falcon2Bionano_9075:HG2_PB_SVrefine2PB10Xhap12_13471:HG2_PB_SVrefine2PBcRplusDovetail_6338:HG3_10X_allpass_3456:HG3_Ill_GATKHCSBGrefine_11875:HG3_Ill_SVrefine2DISCOVARDovetail_13006:HG3_Ill_manta_3987:HG3_PB_SVrefine2Falcon1Dovetail_11436:HG3_PB_SVrefine2PBcRDovetail_9011:HG4_10X_allpass_3317:HG4_Ill_GATKHCSBGrefine_12416:HG4_Ill_SVrefine2DISCOVARDovetail_12814:HG4_Ill_manta_4147:HG4_Ill_scalpel_16655:HG4_PB_SVrefine2Falcon1Dovetail_11461:HG4_PB_SVrefine2PBcRDovetail_9257;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0825688;ClusterMaxSizeDiff=0.0825688;ClusterMaxEditDist=0.0825688;PBcalls=16;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=10;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-332;DistBack=8114;DistForward=-319;DistMin=-319;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:6150946-6151291;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2195.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:51:1/1:0:27:0:13:1/1:0:21:0:22:1/1:0:33:0/1:3:13:.:.:.
chr20	6251168	HG2_Ill_GATKHC_28889	ATTTAAAATATTAAATAATGTTTAAAATATTTAAAATATTAAATAATGTTTAAAATATTTAAAATATTAAATAATG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_18371:HG2_PB_assemblyticsPBcR_14813:HG4_PB_HySA_26622:HG4_PB_assemblyticsfalcon_14967:HG4_Ill_svaba_22514:HG4_Ill_manta_4148:HG4_Ill_Krunchall_24697:HG4_Ill_GATKHC_28873:HG4_Ill_GATKHCSBGrefine_12417:HG4_Ill_250bpfermikitraw_23658:HG4_Ill_150bpfermikitraw_22772:HG3_PB_assemblyticsfalcon_15209:HG3_Ill_svaba_22774:HG3_Ill_manta_3988:HG3_Ill_Krunchall_23939:HG3_Ill_GATKHC_28816:HG3_Ill_GATKHCSBGrefine_11876:HG3_Ill_250bpfermikitraw_23373:HG3_Ill_150bpfermikitraw_22677:HG2_PB_assemblyticsfalcon_15217:HG2_Ill_svaba_22545:HG2_Ill_SpiralSDKrefine_9663:HG2_Ill_Krunchall_24381:HG2_Ill_GATKHC_28889:HG2_Ill_GATKHCSBGrefine_12017:HG2_Ill_250bpfermikitraw_24045:HG2_Ill_150bpfermikitraw_22648:HG2_PB_pbsv_18452:HG3_PB_pbsv_18144;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22648:HG2_Ill_250bpfermikitraw_24045:HG2_Ill_GATKHCSBGrefine_12017:HG2_Ill_GATKHC_28889:HG2_Ill_Krunchall_24381:HG2_Ill_SpiralSDKrefine_9663:HG2_Ill_svaba_22545:HG2_PB_assemblyticsfalcon_15217:HG3_Ill_150bpfermikitraw_22677:HG3_Ill_250bpfermikitraw_23373:HG3_Ill_GATKHCSBGrefine_11876:HG3_Ill_GATKHC_28816:HG3_Ill_Krunchall_23939:HG3_Ill_manta_3988:HG3_Ill_svaba_22774:HG3_PB_assemblyticsfalcon_15209:HG4_Ill_150bpfermikitraw_22772:HG4_Ill_250bpfermikitraw_23658:HG4_Ill_GATKHCSBGrefine_12417:HG4_Ill_GATKHC_28873:HG4_Ill_Krunchall_24697:HG4_Ill_manta_4148:HG4_Ill_svaba_22514:HG4_PB_assemblyticsfalcon_14967;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0397351;ClusterMaxSizeDiff=0.0397351;ClusterMaxEditDist=0.0533333;PBcalls=8;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-75;DistBack=4257;DistForward=-73;DistMin=-73;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=150;REFWIDENED=20:6251148-6251372;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2196.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:39:0|1:28:4:0:33:1|0:0:12:12:1:0/1:36:24:./.:.:.:.:.:.
chr20	7274336	HG2_Ill_scalpel_17047	TGACAATACATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_PB_HySA_33391:HG4_PB_assemblyticsfalcon_14979:HG3_PB_assemblyticsfalcon_15221:HG2_PB_assemblyticsfalcon_15227:HG2_PB_assemblyticsPBcR_14825:HG2_Ill_Krunchall_24394:HG4_Ill_Spiral_1412:HG3_Ill_Spiral_18594:HG2_Ill_Spiral_1191:HG4_PB_pbsv_18375:HG3_PB_pbsv_18149:HG4_Ill_MetaSV_2935:HG3_Ill_MetaSV_2988:HG2_Ill_tnscope_1938:HG2_Ill_MetaSV_2840:HG4_PB_SVrefine2PBcRDovetail_9259:HG4_PB_SVrefine2Falcon1Dovetail_11464:HG4_Ill_scalpel_16664:HG4_Ill_manta_4151:HG4_Ill_SVrefine2DISCOVARDovetail_12818:HG4_Ill_GATKHCSBGrefine_12419:HG4_10X_allpass_3318:HG3_PB_SVrefine2PBcRDovetail_9016:HG3_PB_SVrefine2Falcon1Dovetail_11440:HG3_Ill_scalpel_17392:HG3_Ill_manta_3991:HG3_Ill_SVrefine2DISCOVARDovetail_13015:HG3_Ill_GATKHCSBGrefine_11878:HG3_10X_allpass_3458:HG2_PB_pbsv_18455:HG2_PB_SVrefine2PBcRplusDovetail_6341:HG2_PB_SVrefine2PB10Xhap12_13474:HG2_PB_SVrefine2Falcon2Bionano_9078:HG2_PB_SVrefine2Falcon1plusDovetail_6836:HG2_Ill_scalpel_17047:HG2_Ill_manta_4884:HG2_Ill_SVrefine2DISCOVARplusDovetail_7441:HG2_Ill_GATKHCSBGrefine_12019:HG2_10X_allpass_2823:HG2_10X_SVrefine210Xhap12_12877:HG2_Ill_breakscan11_2647:HG3_PB_HySA_27578;NumClusterSVs=42;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12877:HG2_10X_allpass_2823:HG2_Ill_GATKHCSBGrefine_12019:HG2_Ill_SVrefine2DISCOVARplusDovetail_7441:HG2_Ill_manta_4884:HG2_Ill_scalpel_17047:HG2_PB_SVrefine2Falcon1plusDovetail_6836:HG2_PB_SVrefine2Falcon2Bionano_9078:HG2_PB_SVrefine2PB10Xhap12_13474:HG2_PB_SVrefine2PBcRplusDovetail_6341:HG2_PB_pbsv_18455:HG3_10X_allpass_3458:HG3_Ill_GATKHCSBGrefine_11878:HG3_Ill_SVrefine2DISCOVARDovetail_13015:HG3_Ill_manta_3991:HG3_Ill_scalpel_17392:HG3_PB_SVrefine2Falcon1Dovetail_11440:HG3_PB_SVrefine2PBcRDovetail_9016:HG4_10X_allpass_3318:HG4_Ill_GATKHCSBGrefine_12419:HG4_Ill_SVrefine2DISCOVARDovetail_12818:HG4_Ill_manta_4151:HG4_Ill_scalpel_16664:HG4_PB_SVrefine2Falcon1Dovetail_11464:HG4_PB_SVrefine2PBcRDovetail_9259;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0878049;ClusterMaxSizeDiff=0.0878049;ClusterMaxEditDist=0.0878049;PBcalls=17;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=2783;DistForward=48680;DistMin=2783;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:7274337-7274663;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2197.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:85:./.:0:2:1:5:1/1:0:18:0:19:1/1:0:51:0/1:1:7:.:.:.
chr20	8187617	HG2_Ill_scalpel_17050	AAAAATACAAGGAGAATAAAAATTGTGCCTTCACTCTGATATAAATATGTAAAATATGTTAGTTTATAGACAAAAGACTGTAAGAGGATGTTCAAAAATGAAGCCAGATGTTGCATTATAGTGTTGGTATTAAGGATGAGTTATTTTTCCTTTAAATTCTCTTCTGCTGTTATATGATATTTAT	A	20	PASS	ClusterIDs=HG4_Ill_MetaSV_2938:HG2_PB_pbsv_18460:HG4_PB_pbsv_18379:HG3_PB_pbsv_18153:HG4_PB_assemblyticsfalcon_14984:HG4_PB_HySA_26637:HG4_Ill_Krunchall_24710:HG2_Ill_Krunchall_24397:HG4_PB_SVrefine2PBcRDovetail_9262:HG4_PB_SVrefine2Falcon1Dovetail_11468:HG4_Ill_svaba_22525:HG4_Ill_scalpel_16666:HG4_Ill_manta_4152:HG4_Ill_SVrefine2DISCOVARDovetail_12823:HG4_Ill_GATKHCSBGrefine_12422:HG4_Ill_Cortex_2062:HG4_CG_vcfBeta_11385:HG4_10X_allpass_3319:HG3_Ill_svaba_22784:HG3_Ill_manta_3993:HG3_Ill_SVrefine2DISCOVARDovetail_13018:HG3_Ill_MetaSV_2990:HG3_Ill_GATKHCSBGrefine_11880:HG3_Ill_Cortex_2098:HG3_10X_allpass_3460:HG2_PB_SVrefine2Falcon2Bionano_9081:HG2_Ill_svaba_22556:HG2_Ill_scalpel_17050:HG2_Ill_manta_4885:HG2_Ill_SpiralSDKrefine_9672:HG2_Ill_MetaSV_2844:HG2_Ill_GATKHCSBGrefine_12021:HG2_Ill_Cortex_4837:HG2_10X_SVrefine210Xhap12_12883;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12883:HG2_Ill_Cortex_4837:HG2_Ill_GATKHCSBGrefine_12021:HG2_Ill_MetaSV_2844:HG2_Ill_SpiralSDKrefine_9672:HG2_Ill_manta_4885:HG2_Ill_scalpel_17050:HG2_Ill_svaba_22556:HG2_PB_SVrefine2Falcon2Bionano_9081:HG3_10X_allpass_3460:HG3_Ill_Cortex_2098:HG3_Ill_GATKHCSBGrefine_11880:HG3_Ill_MetaSV_2990:HG3_Ill_SVrefine2DISCOVARDovetail_13018:HG3_Ill_manta_3993:HG3_Ill_svaba_22784:HG4_10X_allpass_3319:HG4_CG_vcfBeta_11385:HG4_Ill_Cortex_2062:HG4_Ill_GATKHCSBGrefine_12422:HG4_Ill_SVrefine2DISCOVARDovetail_12823:HG4_Ill_manta_4152:HG4_Ill_scalpel_16666:HG4_Ill_svaba_22525:HG4_PB_SVrefine2Falcon1Dovetail_11468:HG4_PB_SVrefine2PBcRDovetail_9262;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0494506;ClusterMaxSizeDiff=0.0494506;ClusterMaxEditDist=0.0497238;PBcalls=8;Illcalls=22;TenXcalls=3;CGcalls=1;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=1;HG2count=11;HG3count=8;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-183;DistBack=110848;DistForward=-179;DistMin=-179;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=5;REFWIDENED=20:8187618-8187805;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2198.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:27:0|1:34:0:1:26:1|0:0:19:50:0:0/1:43:20:./.:.:.:.:.:.
chr20	9696761	HG2_Ill_Krunchall_24411	CAAAAGCATACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAATTAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2648:HG3_PB_pbsv_18163:HG2_PB_HySA_33414:HG4_Ill_svaba_22532:HG4_Ill_scalpel_16675:HG4_Ill_manta_4153:HG4_Ill_Krunchall_24724:HG4_Ill_GATKHC_28904:HG4_Ill_GATKHCSBGrefine_12428:HG4_Ill_250bpfermikitraw_23684:HG4_Ill_150bpfermikitraw_22795:HG4_CG_vcfBeta_11392:HG4_10X_allpass_3320:HG3_Ill_svaba_22791:HG3_Ill_manta_3995:HG3_Ill_SVrefine2DISCOVARDovetail_13026:HG3_Ill_Krunchall_23961:HG3_Ill_GATKHC_28843:HG3_Ill_GATKHCSBGrefine_11884:HG3_Ill_250bpfermikitraw_23393:HG3_Ill_150bpfermikitraw_22696:HG3_10X_allpass_3462:HG2_PB_pbsv_18468:HG2_PB_SVrefine2PBcRplusDovetail_6348:HG2_PB_SVrefine2PB10Xhap12_13483:HG2_PB_SVrefine2Falcon1plusDovetail_6848:HG2_Ill_svaba_22567:HG2_Ill_manta_4886:HG2_Ill_SpiralSDKrefine_9682:HG2_Ill_SVrefine2DISCOVARplusDovetail_7450:HG2_Ill_Krunchall_24411:HG2_Ill_GATKHC_28922:HG2_Ill_GATKHCSBGrefine_12026:HG2_Ill_250bpfermikitraw_24071:HG2_Ill_150bpfermikitraw_22668:HG2_10X_allpass_2825:HG4_PB_pbsv_18386;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_2825:HG2_Ill_150bpfermikitraw_22668:HG2_Ill_250bpfermikitraw_24071:HG2_Ill_GATKHCSBGrefine_12026:HG2_Ill_GATKHC_28922:HG2_Ill_Krunchall_24411:HG2_Ill_SVrefine2DISCOVARplusDovetail_7450:HG2_Ill_SpiralSDKrefine_9682:HG2_Ill_manta_4886:HG2_Ill_svaba_22567:HG2_PB_SVrefine2Falcon1plusDovetail_6848:HG2_PB_SVrefine2PB10Xhap12_13483:HG2_PB_SVrefine2PBcRplusDovetail_6348:HG2_PB_pbsv_18468:HG3_10X_allpass_3462:HG3_Ill_150bpfermikitraw_22696:HG3_Ill_250bpfermikitraw_23393:HG3_Ill_GATKHCSBGrefine_11884:HG3_Ill_GATKHC_28843:HG3_Ill_Krunchall_23961:HG3_Ill_SVrefine2DISCOVARDovetail_13026:HG3_Ill_manta_3995:HG3_Ill_svaba_22791:HG4_10X_allpass_3320:HG4_CG_vcfBeta_11392:HG4_Ill_150bpfermikitraw_22795:HG4_Ill_250bpfermikitraw_23684:HG4_Ill_GATKHCSBGrefine_12428:HG4_Ill_GATKHC_28904:HG4_Ill_Krunchall_24724:HG4_Ill_manta_4153:HG4_Ill_scalpel_16675:HG4_Ill_svaba_22532;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.037037;PBcalls=7;Illcalls=26;TenXcalls=3;CGcalls=1;PBexactcalls=4;Illexactcalls=25;TenXexactcalls=3;CGexactcalls=1;HG2count=16;HG3count=10;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-54;DistBack=48606;DistForward=-48;DistMin=-48;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=20:9696762-9696823;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2199.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:33:0|1:21:3:2:30:1|0:0:22:28:0:0/1:32:33:./.:.:.:.:.:.
chr20	10130728	HG4_Ill_SVrefine2DISCOVARDovetail_12830	GTATGTATGTATATGTACATAATATATACATATATGTATATGTATGTGTATGTACATAATATATACGTA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7453:HG2_PB_pbsv_18469:HG3_PB_pbsv_18164:HG2_Ill_SpiralSDKrefine_9684:HG4_Ill_250bpfermikitraw_23688:HG3_Ill_GATKHCSBGrefine_11885:HG3_Ill_250bpfermikitraw_23402:HG2_Ill_250bpfermikitraw_24076:HG4_PB_pbsv_18387:HG4_Ill_SVrefine2DISCOVARDovetail_12830:HG2_PB_SVrefine2PBcRplusDovetail_6349:HG2_PB_SVrefine2PB10Xhap12_13484;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7453:HG4_Ill_SVrefine2DISCOVARDovetail_12830:HG2_PB_SVrefine2PBcRplusDovetail_6349:HG2_PB_SVrefine2PB10Xhap12_13484;NumExactMatchSVs=4;ClusterMaxShiftDist=0.15625;ClusterMaxSizeDiff=0.15625;ClusterMaxEditDist=0.15625;PBcalls=5;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-68;DistBack=31941;DistForward=-34;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=217;REFWIDENED=20:10130729-10131013;PctSeqSimilarity=0.9568;PctSizeSimilarity=0.9118;PctRecOverlap=0.5072;SizeDiff=6;StartDistance=-34;EndDistance=-28;GTMatch=0;TruScore=79;MatchId=2200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:./.:23:23:3:1:0/0:30:1:43:1:./.:50:3:./.:.:.:.:.:.
chr20	14466306	HG3_Ill_150bpfermikitraw_22733	CACTTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAG	C	20	PASS	ClusterIDs=HG3_PB_pbsv_18179:HG2_PB_assemblyticsPBcR_14881:HG3_Ill_svaba_22825:HG3_Ill_scalpel_17427:HG3_Ill_SVrefine2DISCOVARDovetail_13040:HG3_Ill_Krunchall_24003:HG3_Ill_GATKHC_28889:HG3_Ill_GATKHCSBGrefine_11901:HG3_Ill_250bpfermikitraw_23431:HG3_Ill_150bpfermikitraw_22733:HG3_CG_vcfBeta_9838:HG2_PB_pbsv_18481:HG2_PB_assemblyticsfalcon_15290:HG2_PB_SVrefine2PBcRplusDovetail_6359:HG2_PB_SVrefine2Falcon2Bionano_9093:HG2_Ill_svaba_22602:HG2_Ill_scalpel_17086:HG2_Ill_Krunchall_24452:HG2_Ill_GATKHC_28969:HG2_Ill_GATKHCSBGrefine_12038:HG2_Ill_250bpfermikitraw_24113:HG2_CG_vcfBeta_10391:HG2_10X_SVrefine210Xhap12_12906;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12906:HG2_CG_vcfBeta_10391:HG2_Ill_250bpfermikitraw_24113:HG2_Ill_GATKHCSBGrefine_12038:HG2_Ill_GATKHC_28969:HG2_Ill_Krunchall_24452:HG2_Ill_scalpel_17086:HG2_Ill_svaba_22602:HG2_PB_SVrefine2Falcon2Bionano_9093:HG2_PB_SVrefine2PBcRplusDovetail_6359:HG2_PB_assemblyticsfalcon_15290:HG2_PB_pbsv_18481:HG3_CG_vcfBeta_9838:HG3_Ill_150bpfermikitraw_22733:HG3_Ill_250bpfermikitraw_23431:HG3_Ill_GATKHCSBGrefine_11901:HG3_Ill_GATKHC_28889:HG3_Ill_Krunchall_24003:HG3_Ill_SVrefine2DISCOVARDovetail_13040:HG3_Ill_scalpel_17427:HG3_Ill_svaba_22825;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.0775194;PBcalls=6;Illcalls=14;TenXcalls=1;CGcalls=2;PBexactcalls=4;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=2;HG2count=13;HG3count=10;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-64;DistBack=68590;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=20:14466307-14466372;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2201.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:35:0|1:33:3:4:30:1|0:0:27:39:0:0/1:18:17:./.:.:.:.:.:.
chr20	14529068	HG4_PB_SVrefine2Falcon1Dovetail_11490	TAAAATACATTATCTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTTGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12907:HG3_Ill_Krunchall_24005:HG2_Ill_Krunchall_24453:HG4_PB_assemblyticsfalcon_15040:HG3_PB_assemblyticsfalcon_15278:HG2_PB_assemblyticsfalcon_15291:HG2_PB_assemblyticsPBcR_14882:HG4_Ill_MetaSV_2947:HG3_Ill_MetaSV_2995:HG2_PB_HySA_33461:HG2_Ill_tnscope_1940:HG2_Ill_MetaSV_2850:HG4_PB_pbsv_18400:HG4_PB_SVrefine2PBcRDovetail_9276:HG4_PB_SVrefine2Falcon1Dovetail_11490:HG4_PB_HySA_26686:HG4_Ill_scalpel_16706:HG4_Ill_manta_4156:HG4_Ill_SVrefine2DISCOVARDovetail_12845:HG4_Ill_GATKHCSBGrefine_12447:HG3_PB_pbsv_18180:HG3_PB_SVrefine2PBcRDovetail_9036:HG3_PB_SVrefine2Falcon1Dovetail_11462:HG3_PB_HySA_27632:HG3_Ill_scalpel_17429:HG3_Ill_manta_3998:HG3_Ill_SVrefine2DISCOVARDovetail_13041:HG3_Ill_GATKHCSBGrefine_11902:HG3_10X_allpass_3464:HG2_PB_pbsv_18482:HG2_PB_SVrefine2PBcRplusDovetail_6360:HG2_PB_SVrefine2PB10Xhap12_13495:HG2_PB_SVrefine2Falcon2Bionano_9094:HG2_PB_SVrefine2Falcon1plusDovetail_6857:HG2_Ill_scalpel_17087:HG2_Ill_manta_4890:HG2_Ill_SVrefine2DISCOVARplusDovetail_7468:HG2_Ill_GATKHCSBGrefine_12039;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12907:HG4_PB_pbsv_18400:HG4_PB_SVrefine2PBcRDovetail_9276:HG4_PB_SVrefine2Falcon1Dovetail_11490:HG4_PB_HySA_26686:HG4_Ill_scalpel_16706:HG4_Ill_manta_4156:HG4_Ill_SVrefine2DISCOVARDovetail_12845:HG4_Ill_GATKHCSBGrefine_12447:HG3_PB_pbsv_18180:HG3_PB_SVrefine2PBcRDovetail_9036:HG3_PB_SVrefine2Falcon1Dovetail_11462:HG3_PB_HySA_27632:HG3_Ill_scalpel_17429:HG3_Ill_manta_3998:HG3_Ill_SVrefine2DISCOVARDovetail_13041:HG3_Ill_GATKHCSBGrefine_11902:HG3_10X_allpass_3464:HG2_PB_pbsv_18482:HG2_PB_SVrefine2PBcRplusDovetail_6360:HG2_PB_SVrefine2PB10Xhap12_13495:HG2_PB_SVrefine2Falcon2Bionano_9094:HG2_PB_SVrefine2Falcon1plusDovetail_6857:HG2_Ill_scalpel_17087:HG2_Ill_manta_4890:HG2_Ill_SVrefine2DISCOVARplusDovetail_7468:HG2_Ill_GATKHCSBGrefine_12039;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0876623;ClusterMaxSizeDiff=0.0876623;ClusterMaxEditDist=0.0876623;PBcalls=18;Illcalls=18;TenXcalls=2;CGcalls=0;PBexactcalls=13;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=26159;DistForward=3523;DistMin=3523;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:14529069-14529395;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2202.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:74:./.:0:3:0:3:1/1:0:18:0:12:1/1:0:33:./.:1:14:.:.:.
chr20	14680469	HG2_PB_assemblyticsPBcR_14884	TAGAAGTTTAAAGTTTAAACTTTTTAAATCTAGAAGTTTAAAGTTTAAACTTTTTAAATCC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_18182:HG4_PB_pbsv_18402:HG4_Ill_250bpfermikitraw_23728:HG2_PB_assemblyticsPBcR_14884:HG2_Ill_250bpfermikitraw_24114:HG2_PB_pbsv_18484;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24114:HG2_PB_assemblyticsPBcR_14884:HG4_Ill_250bpfermikitraw_23728;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0166667;ClusterMaxSizeDiff=0.0165289;ClusterMaxEditDist=0.0833333;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=-82;DistForward=-31;DistMin=-82;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=59;REFWIDENED=20:14680468-14680589;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2203.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:57:1/1:2:23:0:13:./.:0:2:0:2:1/1:0:23:./.:.:.:.:.:.
chr20	17061944	HG2_Ill_GATKHCSBGrefine_12061	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_18505:HG3_Ill_GATKHC_28923:HG3_Ill_GATKHCSBGrefine_11918:HG3_Ill_250bpfermikitraw_23453:HG3_Ill_150bpfermikitraw_22756:HG2_Ill_svaba_22633:HG2_Ill_manta_4897:HG2_Ill_Krunchall_24478:HG2_Ill_GATKHC_29007:HG2_Ill_GATKHCSBGrefine_12061:HG2_Ill_250bpfermikitraw_24138:HG2_Ill_150bpfermikitraw_22732:HG3_PB_assemblyticsfalcon_15319:HG4_Ill_Krunchall_24792:HG4_Ill_GATKHCSBGrefine_12471:HG4_Ill_250bpfermikitraw_23750:HG2_Ill_Krunchall_24477:HG2_Ill_GATKHC_29006:HG2_Ill_GATKHCSBGrefine_12060:HG2_Ill_250bpfermikitraw_24137:HG4_PB_assemblyticsfalcon_15073:HG3_PB_pbsv_18196:HG4_PB_pbsv_18426:HG2_PB_SVrefine2PBcRplusDovetail_6371:HG2_PB_SVrefine2Falcon1plusDovetail_6870;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22732:HG2_Ill_250bpfermikitraw_24138:HG2_Ill_GATKHCSBGrefine_12061:HG2_Ill_GATKHC_29007:HG2_Ill_Krunchall_24478:HG2_Ill_manta_4897:HG2_Ill_svaba_22633:HG3_Ill_150bpfermikitraw_22756:HG3_Ill_250bpfermikitraw_23453:HG3_Ill_GATKHCSBGrefine_11918:HG3_Ill_GATKHC_28923;NumExactMatchSVs=11;ClusterMaxShiftDist=0.142857;ClusterMaxSizeDiff=0.142857;ClusterMaxEditDist=0.142857;PBcalls=7;Illcalls=18;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=4;DistForward=-60;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=20:17061943-17062011;PctSeqSimilarity=0.964;PctSizeSimilarity=0.9296;PctRecOverlap=0.9306;SizeDiff=-5;StartDistance=5;EndDistance=0;GTMatch=0;TruScore=94;MatchId=2204.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:23:0:27:./.:0:11:1:16:1/1:0:47:./.:.:.:.:.:.
chr20	17103451	HG4_Ill_GATKHCSBGrefine_12472	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTCTTATTCACTTCTTTAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_9292:HG2_PB_PB10Xdip_18094:HG2_10X_allpass_2829:HG4_Ill_MetaSV_2952:HG2_Ill_MetaSV_2854:HG4_Ill_scalpel_16725:HG4_Ill_manta_4162:HG4_Ill_SVrefine2DISCOVARDovetail_12863:HG4_Ill_GATKHCSBGrefine_12472:HG4_10X_allpass_3324:HG3_PB_assemblyticsfalcon_15320:HG3_PB_SVrefine2PBcRDovetail_9045:HG3_PB_SVrefine2Falcon1Dovetail_11477:HG3_PB_HySA_27654:HG3_Ill_manta_4001:HG3_Ill_SVrefine2DISCOVARDovetail_13051:HG3_10X_allpass_3466:HG2_PB_assemblyticsPBcR_14918:HG2_PB_SVrefine2PBcRplusDovetail_6372:HG2_Ill_scalpel_17103:HG2_Ill_manta_4898:HG2_Ill_SVrefine2DISCOVARplusDovetail_7480:HG2_Ill_GATKHCSBGrefine_12062:HG4_PB_assemblyticsfalcon_15074:HG4_PB_SVrefine2Falcon1Dovetail_11506:HG4_Ill_Krunchall_24793:HG2_PB_assemblyticsfalcon_15328:HG2_PB_SVrefine2PB10Xhap12_13512:HG2_PB_SVrefine2Falcon2Bionano_9103:HG2_PB_SVrefine2Falcon1plusDovetail_6871:HG2_Ill_Krunchall_24479:HG3_Ill_MetaSV_3001:HG3_Ill_scalpel_17448:HG3_Ill_GATKHCSBGrefine_11919:HG2_Ill_Spiral_1195:HG2_Ill_breakscan11_2650:HG4_PB_HySA_26733:HG3_PB_pbsv_18197:HG2_PB_pbsv_18506:HG2_Ill_tnscope_1943:HG4_PB_pbsv_18427;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12062:HG2_Ill_SVrefine2DISCOVARplusDovetail_7480:HG2_Ill_manta_4898:HG2_Ill_scalpel_17103:HG2_PB_SVrefine2PBcRplusDovetail_6372:HG2_PB_assemblyticsPBcR_14918:HG3_10X_allpass_3466:HG3_Ill_SVrefine2DISCOVARDovetail_13051:HG3_Ill_manta_4001:HG3_PB_HySA_27654:HG3_PB_SVrefine2Falcon1Dovetail_11477:HG3_PB_SVrefine2PBcRDovetail_9045:HG3_PB_assemblyticsfalcon_15320:HG4_10X_allpass_3324:HG4_Ill_GATKHCSBGrefine_12472:HG4_Ill_SVrefine2DISCOVARDovetail_12863:HG4_Ill_manta_4162:HG4_Ill_scalpel_16725;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0804769;ClusterMaxSizeDiff=0.0804769;ClusterMaxEditDist=0.0804769;PBcalls=18;Illcalls=20;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-347;DistBack=-544;DistForward=61549;DistMin=-544;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=20:17103452-17103798;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:44:./.:1:23:0:4:1/1:0:37:0:26:1/1:0:24:./.:3:18:.:.:.
chr20	18757019	HG3_PB_SVrefine2PBcRDovetail_9053	GTAAAAAGTAAAGTAGAGGTTCCTCTTCCAAGACTTTCCTCCCCATTTAACTAGTAATAAATAGTGACTTATCTTAGAAGCAAAATTTATTCAAAGACCTGTGCTAACATTTTTAAATATCTGCTAGCCGAAAAATTACTTCTCTTAGAAGGTCAAACAAAGCAATTAAGTTAAAACATATTAAACAAGTTTGAAGAGGAATTATGAAATAAAAAGAGGGGGAATTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12924:HG4_PB_pbsv_18439:HG3_PB_pbsv_18207:HG2_PB_pbsv_18516:HG4_Ill_GATKHCSBGrefine_12482:HG4_10X_allpass_3325:HG3_Ill_GATKHCSBGrefine_11930:HG3_10X_allpass_3468:HG2_Ill_GATKHCSBGrefine_12072:HG4_Ill_MetaSV_2955:HG3_Ill_MetaSV_3004:HG4_PB_SVrefine2PBcRDovetail_9300:HG4_PB_SVrefine2Falcon1Dovetail_11513:HG4_Ill_SVrefine2DISCOVARDovetail_12872:HG3_PB_SVrefine2PBcRDovetail_9053:HG3_PB_SVrefine2Falcon1Dovetail_11484:HG3_Ill_SVrefine2DISCOVARDovetail_13061:HG2_PB_SVrefine2PBcRplusDovetail_6380:HG2_PB_SVrefine2PB10Xhap12_13520:HG2_PB_SVrefine2Falcon2Bionano_9109:HG2_PB_SVrefine2Falcon1plusDovetail_6879:HG2_Ill_SVrefine2DISCOVARplusDovetail_7487;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12924:HG4_PB_SVrefine2PBcRDovetail_9300:HG4_PB_SVrefine2Falcon1Dovetail_11513:HG4_Ill_SVrefine2DISCOVARDovetail_12872:HG3_PB_SVrefine2PBcRDovetail_9053:HG3_PB_SVrefine2Falcon1Dovetail_11484:HG3_Ill_SVrefine2DISCOVARDovetail_13061:HG2_PB_SVrefine2PBcRplusDovetail_6380:HG2_PB_SVrefine2PB10Xhap12_13520:HG2_PB_SVrefine2Falcon2Bionano_9109:HG2_PB_SVrefine2Falcon1plusDovetail_6879:HG2_Ill_SVrefine2DISCOVARplusDovetail_7487;NumExactMatchSVs=12;ClusterMaxShiftDist=0.013245;ClusterMaxSizeDiff=0.013245;ClusterMaxEditDist=0.0265487;PBcalls=11;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-226;DistBack=9637;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=353;REFWIDENED=20:18757020-18757598;PctSeqSimilarity=0.9881;PctSizeSimilarity=1;PctRecOverlap=0.2643;SizeDiff=0;StartDistance=-167;EndDistance=-167;GTMatch=0;TruScore=75;MatchId=2206.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:50:1/1:2:26:1:16:./.:7:1:14:0:0/0:31:0:./.:.:.:.:.:.
chr20	19061416	HG3_PB_SVrefine2PBcRDovetail_9054	TCCAGGGCCTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_18440:HG4_PB_assemblyticsfalcon_15095:HG3_PB_assemblyticsfalcon_15337:HG2_PB_HySA_33512:HG2_PB_assemblyticsPBcR_14945:HG4_Ill_Krunchall_24807:HG3_Ill_Krunchall_24046:HG2_Ill_Krunchall_24501:HG3_PB_HySA_27669:HG4_PB_HySA_26746:HG3_Ill_MetaSV_3005:HG2_Ill_tnscope_1944:HG2_Ill_MetaSV_2858:HG4_PB_SVrefine2PBcRDovetail_9301:HG4_PB_SVrefine2Falcon1Dovetail_11514:HG4_Ill_scalpel_16734:HG4_Ill_manta_4163:HG4_Ill_SVrefine2DISCOVARDovetail_12873:HG4_Ill_MetaSV_2956:HG4_Ill_GATKHCSBGrefine_12483:HG3_PB_pbsv_18208:HG3_PB_SVrefine2PBcRDovetail_9054:HG3_PB_SVrefine2Falcon1Dovetail_11485:HG3_Ill_scalpel_17464:HG3_Ill_manta_4004:HG3_Ill_SVrefine2DISCOVARDovetail_13063:HG3_Ill_GATKHCSBGrefine_11931:HG3_10X_allpass_3469:HG2_PB_pbsv_18517:HG2_PB_SVrefine2PBcRplusDovetail_6381:HG2_PB_SVrefine2PB10Xhap12_13521:HG2_PB_SVrefine2Falcon2Bionano_9110:HG2_Ill_scalpel_17120:HG2_Ill_SVrefine2DISCOVARplusDovetail_7489:HG2_Ill_GATKHCSBGrefine_12073:HG2_10X_SVrefine210Xhap12_12925:HG2_Ill_breakscan11_2652;NumClusterSVs=37;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12925:HG2_Ill_GATKHCSBGrefine_12073:HG2_Ill_SVrefine2DISCOVARplusDovetail_7489:HG2_Ill_scalpel_17120:HG2_PB_SVrefine2Falcon2Bionano_9110:HG2_PB_SVrefine2PB10Xhap12_13521:HG2_PB_SVrefine2PBcRplusDovetail_6381:HG2_PB_pbsv_18517:HG3_10X_allpass_3469:HG3_Ill_GATKHCSBGrefine_11931:HG3_Ill_SVrefine2DISCOVARDovetail_13063:HG3_Ill_manta_4004:HG3_Ill_scalpel_17464:HG3_PB_SVrefine2Falcon1Dovetail_11485:HG3_PB_SVrefine2PBcRDovetail_9054:HG3_PB_pbsv_18208:HG4_Ill_GATKHCSBGrefine_12483:HG4_Ill_MetaSV_2956:HG4_Ill_SVrefine2DISCOVARDovetail_12873:HG4_Ill_manta_4163:HG4_Ill_scalpel_16734:HG4_PB_SVrefine2Falcon1Dovetail_11514:HG4_PB_SVrefine2PBcRDovetail_9301;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0909091;ClusterMaxSizeDiff=0.0909091;ClusterMaxEditDist=0.0909091;PBcalls=16;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=9;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-313;DistBack=2378;DistForward=-300;DistMin=-300;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:19061417-19061743;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2207.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:42:0|1:36:2:0:38:1|0:0:32:45:0:0/1:23:25:0/1:22:3:.:.:.
chr20	21285901	HG2_10X_SVrefine210Xhap12_12935	GTTTATTTATTTAGAGACGGAGTCTCGCTATGTCTCTTAGGCTGGAGTACGGTGGCATGATCTCGGCTCACTACAACCTCTGGCCTCCTGGGTTCAAGCCATTCTTCTGCCACAGCGTCCAGAGCAGCTAGGACTACAGGTGTGCGCCGCCACGCCCAGCTGATTTTTTTTTAGTAGAGACGGAGTTTTGCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTCAGCCTCCACAGTGCTGAGACTACAGGCATGAGCCACCATACGTGGCCTTTTTTTTTTTTTTTTTTTTTTTGGATTTTTAGTAGAGACGGGGTTTTGCCATGTTGGCTATGCTGGTCTCTGTCCTGACCACACGTGATCCGCCTCCCTGGGCCTCCCTTGTGCTAGGATTACAGGTGTGAGCCACGGCGCCCGGCCCATCTTTCTTCCTTTAAATCGTTTTCTTAGTTTTTATTCTTAATTCTTTTTTTTTTTTTTTTGAGACGGAGCCTCGCTCTGTCTCCCAGGCTGGAGTGCAGTGGCTCAATCAATCTCGGCTCACTGCAAGCTCCGCCTTCGGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGCTAATTTTTTTGTACTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTCTGATCCGCCTGCCTTGGCCTCCTTATTCTTAATTCTTAAGAAATGCTGTGTGGGATGTGAGATTTCCGAGTCATTGTAGGACCCAAAATAGCTCCATTCTACCCTTATACACGTGAATGATCATTAGCTAGGCATGGAATTCGAGGTGTTTTTTTTTTCTTCTTCTTTGAGACGGAGTCTAGCTCTGTCACCCAGGCAGGAGTGCAGTGGTGTGATATCGGCTCACTGCAGCCTCCACTTCCCGGGTTCAAGCCGTTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCGCCACCACGCCCGGCTAATTTTTGTAGTTTTAGTAGAGACGGAGTTTCACCATGTTGGCCAAGCTGATCTTGAACTCCTGACCTCAGGTGATCCACCAGCCCCTGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCTGGCCAGGAATTCCAGTTTTAATATTAGGTTCCCTCAGAACTTTGAAAGAAATTGTTCTTTTGTACTCTCTCATCTAGTAGTGTTGATGACAAGTTCGGTGTTAATGTGATGTATTTATTTAACCAGCAGTTATATAGCATTTACCATTGTTTTAAGAACTTTATTATAACTTGTTTGATCCTCACAACCACATGACTTCTACTGTTGTAATTATTTTTATTACATACAAATAATAGAAGCACGTTATTTGGAGACAACCAATATTGTTATTATGTTATAATAATTACTATGTTTATTGGCCGGGTGCGGTGGCTCACGACTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCACGAGGTCAAGAGATCCAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGCGCATGGTGGCGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGCACCCGGGAGACAGACATTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGTGACAGAGCGAGACTCCATCTCAGAAAAATAATGATTATTGTTATGTTTATTATTATTTCAGATGAGAAAATGGAAACACAGCAGGGTCGCGTATCATACCCAAGGTCACTCAGCTGATAAATGTCAGAGCTAGTGTGGAAACCAGAAGGACTTAATTTTTATGCTCATATGCTTTCATTCTTTTGTGATCAGTTTTCCTTCCTAGATTTTAAAAAGATCTTTTTCTTGATAGTGTAAACTTTCATTATTAGGTACCCAGGTATAGATGTTATTTTAAATTCAGATTCATTTTGATCAGTACGTGGCTCACTCTTTGAGTCTGGAGTCTTACGTTCTTCGGTTTTAGGGAATGCTGTTTGATGATTTCTTGACCTTTTTTTCTTCCCTTTCCAGACTCAGGATACTGGTCCTCTTAGACTCATGTATTTTTATTTTTATTTTCTCTCTCATTCTCTGGCTTTCCTTGAAACCTCCCCCAACCTTTGGTGTTTTTGCAGCTTTGTTGAGGTATACTTGACATAGAATAAACTGCAGGTAATTAAAGTGTACAATTTTCTTTTAACTTTTTTCGAGTTGAGGTCTTGCTCTGTCACCAGGCTGGAATGTAGTGTGCAATCATGGCTCACTGCAGCCTCAAAGTCCTGGGCTTAAAGTATATAATTTAATACAGTGCATACATCTGTGAAACCAGCACAACCAAGACAGTGAACGTGACCTCTAAAACATTCCTTCTGCCCTTTTGTAGTTCCTTTCTACTATCCCTCCCTGCCACCTGTCTTTTGCCAACCACTGACTGGTTTGCTTTCTGACCGTATGATAAGTTTTCATTTTCTATAATTTTTTATAAATGAGATTATATAGTATATACTCATTTTTTGCCTCAGTTACTTTCATTCAGTATACTTATTTTGAAATTCTTCCGTTGTTGTATGTGTCAGTAGTTTATTTCTTTTTTGTT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12935:HG2_PB_assemblyticsPBcR_14973:HG4_PB_assemblyticsfalcon_15123:HG3_PB_assemblyticsfalcon_15366:HG2_PB_assemblyticsfalcon_15381:HG4_PB_pbsv_18456:HG2_PB_pbsv_18530:HG4_Ill_Krunchall_24823:HG3_Ill_Krunchall_24064:HG2_Ill_Krunchall_24517:HG4_10X_allpass_3327:HG2_10X_allpass_2830:HG3_PB_pbsv_18221:HG3_10X_allpass_3471:HG2_Ill_SpiralSDKrefine_9745:HG4_Ill_MetaSV_2958:HG4_Ill_GATKHCSBGrefine_12491:HG3_Ill_MetaSV_3008:HG3_Ill_GATKHCSBGrefine_11944:HG2_Ill_MetaSV_2862:HG2_Ill_GATKHCSBGrefine_12082:HG2_Ill_tnscope_1945:HG4_PB_SVrefine2PBcRDovetail_9310:HG4_PB_SVrefine2Falcon1Dovetail_11528:HG4_Ill_SVrefine2DISCOVARDovetail_12886:HG3_PB_SVrefine2PBcRDovetail_9060:HG3_PB_SVrefine2Falcon1Dovetail_11500:HG3_Ill_SVrefine2DISCOVARDovetail_13071:HG2_PB_SVrefine2PBcRplusDovetail_6393:HG2_PB_SVrefine2PB10Xhap12_13536:HG2_PB_SVrefine2Falcon2Bionano_9119:HG2_PB_SVrefine2Falcon1plusDovetail_6893:HG2_Ill_SVrefine2DISCOVARplusDovetail_7501;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12935:HG4_PB_SVrefine2PBcRDovetail_9310:HG4_PB_SVrefine2Falcon1Dovetail_11528:HG4_Ill_SVrefine2DISCOVARDovetail_12886:HG3_PB_SVrefine2PBcRDovetail_9060:HG3_PB_SVrefine2Falcon1Dovetail_11500:HG3_Ill_SVrefine2DISCOVARDovetail_13071:HG2_PB_SVrefine2PBcRplusDovetail_6393:HG2_PB_SVrefine2PB10Xhap12_13536:HG2_PB_SVrefine2Falcon2Bionano_9119:HG2_PB_SVrefine2Falcon1plusDovetail_6893:HG2_Ill_SVrefine2DISCOVARplusDovetail_7501;NumExactMatchSVs=12;ClusterMaxShiftDist=0.190625;ClusterMaxSizeDiff=0.190625;ClusterMaxEditDist=0.190625;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-2678;DistBack=15507;DistForward=45298;DistMin=15507;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=246;REFWIDENED=20:21285902-21288825;PctSeqSimilarity=0.8906;PctSizeSimilarity=0.9985;PctRecOverlap=0.9281;SizeDiff=-4;StartDistance=-189;EndDistance=-193;GTMatch=0;TruScore=93;MatchId=2209.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:1:86:1/1:1:10:0:15:./.:3:0:8:0:0/0:49:0:./.:19:185:2677:.:.
chr20	21849902	HG2_Ill_scalpel_17141	GTCTTTACATCTGTTGAAATCAGGAAGTAACTGGAATTCACAAATTTCTGGTCACTTGAGATTTCCTGACTGTTTTATGAACCACAGTTGAACATAAATTAATCTTGGGAACATACTGGAGTTTACTTGTGTCTCTAGACCATTTTATAGCCCAGATCTTTTCCTGAAAGATGGCTTTGCTGTTGATTTCCACTTTCCTTAGGATCTTTACAGAAACTTCTCCAGCTTCTGAAAGGGCCAGAAGAATTTACCTGTCTGAAAGCAGAGGTCACACATGAATGGAATGAA	G	20	PASS	ClusterIDs=HG3_PB_pbsv_18223:HG4_PB_pbsv_18459:HG2_PB_pbsv_18532:HG4_Ill_MetaSV_2959:HG3_Ill_MetaSV_3009:HG2_PB_HySA_33550:HG2_Ill_tnscope_1946:HG2_Ill_MetaSV_2863:HG4_PB_assemblyticsfalcon_15128:HG4_PB_SVrefine2PBcRDovetail_9312:HG4_PB_SVrefine2Falcon1Dovetail_11530:HG4_Ill_svaba_22629:HG4_Ill_scalpel_16754:HG4_Ill_manta_4168:HG4_Ill_SVrefine2DISCOVARDovetail_12890:HG4_Ill_GATKHCSBGrefine_12494:HG4_10X_allpass_3328:HG3_PB_assemblyticsfalcon_15370:HG3_PB_SVrefine2Falcon1Dovetail_11502:HG3_Ill_svaba_22898:HG3_Ill_scalpel_17484:HG3_Ill_manta_4007:HG3_Ill_SVrefine2DISCOVARDovetail_13073:HG3_Ill_GATKHCSBGrefine_11946:HG3_10X_allpass_3473:HG2_PB_assemblyticsfalcon_15384:HG2_PB_SVrefine2PBcRplusDovetail_6395:HG2_PB_SVrefine2PB10Xhap12_13539:HG2_PB_SVrefine2Falcon2Bionano_9121:HG2_PB_SVrefine2Falcon1plusDovetail_6895:HG2_Ill_svaba_22675:HG2_Ill_scalpel_17141:HG2_Ill_manta_4906:HG2_Ill_SpiralSDKrefine_9747:HG2_Ill_SVrefine2DISCOVARplusDovetail_7503:HG2_Ill_GATKHCSBGrefine_12084:HG2_10X_allpass_2831:HG2_10X_SVrefine210Xhap12_12938:HG2_PB_assemblyticsPBcR_14977:HG4_Ill_Krunchall_24826:HG3_Ill_Krunchall_24068:HG2_Ill_breakscan11_2654:HG2_Ill_Krunchall_24520;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12938:HG2_10X_allpass_2831:HG2_Ill_GATKHCSBGrefine_12084:HG2_Ill_SVrefine2DISCOVARplusDovetail_7503:HG2_Ill_SpiralSDKrefine_9747:HG2_Ill_manta_4906:HG2_Ill_scalpel_17141:HG2_Ill_svaba_22675:HG2_PB_SVrefine2Falcon1plusDovetail_6895:HG2_PB_SVrefine2Falcon2Bionano_9121:HG2_PB_SVrefine2PB10Xhap12_13539:HG2_PB_SVrefine2PBcRplusDovetail_6395:HG2_PB_assemblyticsfalcon_15384:HG3_10X_allpass_3473:HG3_Ill_GATKHCSBGrefine_11946:HG3_Ill_SVrefine2DISCOVARDovetail_13073:HG3_Ill_manta_4007:HG3_Ill_scalpel_17484:HG3_Ill_svaba_22898:HG3_PB_SVrefine2Falcon1Dovetail_11502:HG3_PB_assemblyticsfalcon_15370:HG4_10X_allpass_3328:HG4_Ill_GATKHCSBGrefine_12494:HG4_Ill_SVrefine2DISCOVARDovetail_12890:HG4_Ill_manta_4168:HG4_Ill_scalpel_16754:HG4_Ill_svaba_22629:HG4_PB_SVrefine2Falcon1Dovetail_11530:HG4_PB_SVrefine2PBcRDovetail_9312:HG4_PB_assemblyticsfalcon_15128;NumExactMatchSVs=30;ClusterMaxShiftDist=0.00694444;ClusterMaxSizeDiff=0.00694444;ClusterMaxEditDist=0.00695652;PBcalls=15;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-287;DistBack=6219;DistForward=54044;DistMin=6219;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=20:21849903-21850190;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2210.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:56:./.:0:0:0:1:1/1:0:26:1:10:1/1:0:59:./.:.:.:.:.:.
chr20	22097665	HG3_PB_SVrefine2PBcRDovetail_9062	GTAAAGGGATCAATTCAACAAGAAGAACTAACTATCCTAAATATATATGCACACAA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_18460:HG4_PB_assemblyticsfalcon_15131:HG2_PB_assemblyticsfalcon_15388:HG2_PB_assemblyticsPBcR_14979:HG4_Ill_svaba_22630:HG4_Ill_scalpel_16755:HG4_Ill_manta_4169:HG4_Ill_SVrefine2DISCOVARDovetail_12892:HG4_Ill_Krunchall_24828:HG4_Ill_GATKHC_29025:HG4_Ill_GATKHCSBGrefine_12495:HG4_Ill_250bpfermikitraw_23794:HG4_Ill_150bpfermikitraw_22888:HG4_10X_allpass_3329:HG3_PB_SVrefine2PBcRDovetail_9062:HG3_PB_SVrefine2Falcon1Dovetail_11504:HG3_Ill_svaba_22902:HG3_Ill_Krunchall_24071:HG3_Ill_GATKHC_28973:HG3_Ill_GATKHCSBGrefine_11947:HG3_Ill_250bpfermikitraw_23497:HG3_Ill_150bpfermikitraw_22807:HG2_PB_pbsv_18536:HG2_PB_SVrefine2PBcRplusDovetail_6397:HG2_PB_SVrefine2PB10Xhap12_13541:HG2_PB_SVrefine2Falcon2Bionano_9122:HG2_PB_SVrefine2Falcon1plusDovetail_6897:HG2_Ill_svaba_22679:HG2_Ill_manta_4908:HG2_Ill_SpiralSDKrefine_9752:HG2_Ill_Krunchall_24523:HG2_Ill_GATKHC_29058:HG2_Ill_GATKHCSBGrefine_12086:HG2_Ill_250bpfermikitraw_24182:HG2_Ill_150bpfermikitraw_22774:HG2_10X_allpass_2832:HG2_10X_SVrefine210Xhap12_12939:HG3_PB_pbsv_18227;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12939:HG2_10X_allpass_2832:HG2_Ill_150bpfermikitraw_22774:HG2_Ill_250bpfermikitraw_24182:HG2_Ill_GATKHCSBGrefine_12086:HG2_Ill_GATKHC_29058:HG2_Ill_Krunchall_24523:HG2_Ill_SpiralSDKrefine_9752:HG2_Ill_manta_4908:HG2_Ill_svaba_22679:HG2_PB_SVrefine2Falcon1plusDovetail_6897:HG2_PB_SVrefine2Falcon2Bionano_9122:HG2_PB_SVrefine2PB10Xhap12_13541:HG2_PB_SVrefine2PBcRplusDovetail_6397:HG2_PB_pbsv_18536:HG3_Ill_150bpfermikitraw_22807:HG3_Ill_250bpfermikitraw_23497:HG3_Ill_GATKHCSBGrefine_11947:HG3_Ill_GATKHC_28973:HG3_Ill_Krunchall_24071:HG3_Ill_svaba_22902:HG3_PB_SVrefine2Falcon1Dovetail_11504:HG3_PB_SVrefine2PBcRDovetail_9062:HG4_10X_allpass_3329:HG4_Ill_150bpfermikitraw_22888:HG4_Ill_250bpfermikitraw_23794:HG4_Ill_GATKHCSBGrefine_12495:HG4_Ill_GATKHC_29025:HG4_Ill_Krunchall_24828:HG4_Ill_SVrefine2DISCOVARDovetail_12892:HG4_Ill_manta_4169:HG4_Ill_scalpel_16755:HG4_Ill_svaba_22630;NumExactMatchSVs=33;ClusterMaxShiftDist=0.188679;ClusterMaxSizeDiff=0.188679;ClusterMaxEditDist=0.261682;PBcalls=12;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=23;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-55;DistBack=6420;DistForward=2109;DistMin=2109;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=20:22097666-22097726;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2211.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:30:0|1:11:3:1:27:0|1:37:1:0:38:0/1:38:22:./.:.:.:.:.:.
chr20	22519494	HG4_PB_HySA_26788	TTCTTCTTCTTCCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTGCTTCTTCTCCTTCTTCTTCTCCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_18463:HG4_Ill_250bpfermikitraw_23799:HG4_PB_HySA_26788:HG2_PB_pbsv_18540:HG3_PB_pbsv_18230;NumClusterSVs=5;ExactMatchIDs=HG4_PB_HySA_26788;NumExactMatchSVs=1;ClusterMaxShiftDist=0.233333;ClusterMaxSizeDiff=0.233333;ClusterMaxEditDist=0.283333;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=-19;DistForward=-56;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=224;REFWIDENED=20:22519416-22519705;PctSeqSimilarity=0.9771;PctSizeSimilarity=0.9545;PctRecOverlap=0.9552;SizeDiff=3;StartDistance=-3;EndDistance=0;GTMatch=0;TruScore=96;MatchId=2212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:8:40:1/1:1:5:3:17:./.:1:5:0:1:0/1:11:19:./.:.:.:.:.:.
chr20	24873683	HG4_Ill_150bpfermikitraw_22919	CGTGGGGTCCTCGCCTGGGGCCACCTGATGAGTGCTCGGGATGAGGTCAGACTCGGGCATCCCAGG	C	20	PASS	ClusterIDs=HG4_PB_HySA_26812:HG2_PB_HySA_33601:HG2_PB_pbsv_18559:HG4_PB_pbsv_18482:HG2_PB_assemblyticsPBcR_15013:HG4_PB_assemblyticsfalcon_15165:HG4_Ill_svaba_22653:HG4_Ill_scalpel_16777:HG4_Ill_manta_4175:HG4_Ill_Krunchall_24851:HG4_Ill_GATKHC_29059:HG4_Ill_GATKHCSBGrefine_12510:HG4_Ill_250bpfermikitraw_23821:HG4_Ill_150bpfermikitraw_22919:HG4_10X_allpass_3331:HG2_PB_assemblyticsfalcon_15424:HG2_Ill_svaba_22700:HG2_Ill_SpiralSDKrefine_9767:HG2_Ill_Krunchall_24543:HG2_Ill_GATKHC_29086:HG2_Ill_GATKHCSBGrefine_12100:HG2_Ill_250bpfermikitraw_24207:HG2_Ill_150bpfermikitraw_22798;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22798:HG2_Ill_250bpfermikitraw_24207:HG2_Ill_GATKHCSBGrefine_12100:HG2_Ill_GATKHC_29086:HG2_Ill_Krunchall_24543:HG2_Ill_SpiralSDKrefine_9767:HG2_Ill_svaba_22700:HG2_PB_assemblyticsfalcon_15424:HG4_10X_allpass_3331:HG4_Ill_150bpfermikitraw_22919:HG4_Ill_250bpfermikitraw_23821:HG4_Ill_GATKHCSBGrefine_12510:HG4_Ill_GATKHC_29059:HG4_Ill_Krunchall_24851:HG4_Ill_manta_4175:HG4_Ill_scalpel_16777:HG4_Ill_svaba_22653:HG4_PB_assemblyticsfalcon_15165;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0451128;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.075188;PBcalls=7;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=15;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-65;DistBack=4331;DistForward=20480;DistMin=4331;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=66;REFWIDENED=20:24873665-24873795;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2214.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:30:0|1:29:1:2:26:0|1:30:1:0:13:0/1:19:16:./.:.:.:.:.:.
chr20	24903697	HG2_PB_SVrefine2PBcRplusDovetail_6416	TGCAGAAGCCTCAGGAGCTGATGGAATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATGAAATGAATGAAATGAAGTGAGAAGGAAAGTTTAGAGAAAAAAGAATAAAAAGAAACAAACAACACCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGCTGTACCTGAAAGTGACGGGGAGAATGAAAACAAGTTGGAAAACACTCTCCAGGATATTATCCAGGAGAACTTCCCCAGTCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAATGCCACAAAGATACTCCTCAAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCAAAAAGGGAAGCCCATGAGACTAACAGTGGATCTCTTGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACGTTCTTAAGGAAAAGAATTTTTAACCCAGAATTTTATATCCAGCCAAACTAAGCTTCGTAAGTGAAGGAGAAATAAAATCCTTTACAGAAAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAAATATAAAGACCATCAAG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_18484:HG3_PB_assemblyticsfalcon_15408:HG3_PB_SVrefine2Falcon1Dovetail_11523:HG2_10X_allpass_2834:HG2_PB_HySA_33602:HG4_Ill_Krunchall_24853:HG3_Ill_Krunchall_24092:HG2_Ill_Krunchall_24544:HG2_PB_assemblyticsfalcon_15425:HG2_Ill_tnscope_1947:HG4_PB_SVrefine2PBcRDovetail_9329:HG4_PB_SVrefine2Falcon1Dovetail_11546:HG4_Ill_manta_4176:HG4_Ill_SVrefine2DISCOVARDovetail_12907:HG4_Ill_MetaSV_2966:HG4_Ill_GATKHCSBGrefine_12513:HG4_10X_allpass_3332:HG3_PB_SVrefine2PBcRDovetail_9079:HG3_Ill_SVrefine2DISCOVARDovetail_13086:HG3_Ill_MetaSV_3016:HG3_Ill_GATKHCSBGrefine_11962:HG3_10X_allpass_3475:HG2_PB_pbsv_18561:HG2_PB_SVrefine2PBcRplusDovetail_6416:HG2_PB_SVrefine2PB10Xhap12_13559:HG2_PB_SVrefine2Falcon2Bionano_9136:HG2_PB_SVrefine2Falcon1plusDovetail_6913:HG2_Ill_MetaSV_2870:HG2_Ill_GATKHCSBGrefine_12101:HG2_10X_SVrefine210Xhap12_12958:HG2_Ill_breakscan11_2657:HG2_PB_assemblyticsPBcR_15014:HG3_PB_pbsv_18251;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12958:HG2_Ill_GATKHCSBGrefine_12101:HG2_Ill_MetaSV_2870:HG2_PB_SVrefine2Falcon1plusDovetail_6913:HG2_PB_SVrefine2Falcon2Bionano_9136:HG2_PB_SVrefine2PB10Xhap12_13559:HG2_PB_SVrefine2PBcRplusDovetail_6416:HG2_PB_pbsv_18561:HG3_10X_allpass_3475:HG3_Ill_GATKHCSBGrefine_11962:HG3_Ill_MetaSV_3016:HG3_Ill_SVrefine2DISCOVARDovetail_13086:HG3_PB_SVrefine2PBcRDovetail_9079:HG4_10X_allpass_3332:HG4_Ill_GATKHCSBGrefine_12513:HG4_Ill_MetaSV_2966:HG4_Ill_SVrefine2DISCOVARDovetail_12907:HG4_Ill_manta_4176:HG4_PB_SVrefine2Falcon1Dovetail_11546:HG4_PB_SVrefine2PBcRDovetail_9329;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0111732;ClusterMaxSizeDiff=0.0111732;ClusterMaxEditDist=0.0195531;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-718;DistBack=-719;DistForward=33213;DistMin=-719;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=20:24903698-24904417;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2215.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:0:25:1:10:1/1:0:16:0:25:1/1:0:35:1/1:2:30:.:.:.
chr20	30899227	HG3_PB_SVrefine2Falcon1Dovetail_11534	TAAAGAACAGCAACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2660:HG4_PB_assemblyticsfalcon_15199:HG3_PB_assemblyticsfalcon_15435:HG2_PB_assemblyticsfalcon_15463:HG2_PB_assemblyticsPBcR_15046:HG4_Ill_Spiral_1427:HG3_PB_pbsv_18275:HG3_PB_HySA_27777:HG4_PB_HySA_26848:HG2_PB_pbsv_18583:HG3_Ill_MetaSV_3028:HG2_PB_HySA_33650:HG2_Ill_MetaSV_2877:HG4_PB_pbsv_18508:HG4_PB_SVrefine2PBcRDovetail_9342:HG4_PB_SVrefine2Falcon1Dovetail_11560:HG4_Ill_scalpel_16799:HG4_Ill_manta_4178:HG4_Ill_SVrefine2DISCOVARDovetail_12921:HG4_Ill_MetaSV_2977:HG4_Ill_GATKHCSBGrefine_12530:HG4_10X_allpass_3335:HG3_PB_SVrefine2PBcRDovetail_9090:HG3_PB_SVrefine2Falcon1Dovetail_11534:HG3_Ill_scalpel_17528:HG3_Ill_manta_4014:HG3_Ill_SVrefine2DISCOVARDovetail_13096:HG3_Ill_GATKHCSBGrefine_11978:HG3_10X_allpass_3479:HG2_PB_SVrefine2PBcRplusDovetail_6429:HG2_PB_SVrefine2PB10Xhap12_13583:HG2_PB_SVrefine2Falcon2Bionano_9151:HG2_PB_SVrefine2Falcon1plusDovetail_6929:HG2_Ill_scalpel_17190:HG2_Ill_manta_4916:HG2_Ill_SVrefine2DISCOVARplusDovetail_7535:HG2_Ill_GATKHCSBGrefine_12120:HG2_10X_allpass_2837:HG2_10X_SVrefine210Xhap12_12973;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12973:HG2_10X_allpass_2837:HG2_Ill_GATKHCSBGrefine_12120:HG2_Ill_SVrefine2DISCOVARplusDovetail_7535:HG2_Ill_manta_4916:HG2_Ill_scalpel_17190:HG2_PB_SVrefine2Falcon1plusDovetail_6929:HG2_PB_SVrefine2Falcon2Bionano_9151:HG2_PB_SVrefine2PB10Xhap12_13583:HG2_PB_SVrefine2PBcRplusDovetail_6429:HG3_10X_allpass_3479:HG3_Ill_GATKHCSBGrefine_11978:HG3_Ill_SVrefine2DISCOVARDovetail_13096:HG3_Ill_manta_4014:HG3_Ill_scalpel_17528:HG3_PB_SVrefine2Falcon1Dovetail_11534:HG3_PB_SVrefine2PBcRDovetail_9090:HG4_10X_allpass_3335:HG4_Ill_GATKHCSBGrefine_12530:HG4_Ill_MetaSV_2977:HG4_Ill_SVrefine2DISCOVARDovetail_12921:HG4_Ill_manta_4178:HG4_Ill_scalpel_16799:HG4_PB_SVrefine2Falcon1Dovetail_11560:HG4_PB_SVrefine2PBcRDovetail_9342:HG4_PB_pbsv_18508;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0765391;ClusterMaxSizeDiff=0.0765391;ClusterMaxEditDist=0.0765391;PBcalls=18;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=13;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-305;DistBack=-430;DistForward=10886;DistMin=-430;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8464;REFWIDENED=20:30889479-30907996;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2216.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:53:1/1:0:8:0:12:./.:0:13:0:4:1/1:0:25:./.:2:11:.:.:.
chr20	31310837	HG3_Ill_SVrefine2DISCOVARDovetail_13099	AAATAAATAAATAAATAATAATAATAATAATAATAAAGACTTGTGATCCTCTCCCTCTCCCTCTCCCTCTCCGTCTCCCTCTCCCTCTCCCTCTCCCTCCCTCTCCGTCTCCGTCTCCGTCTCCGTCTCCCTCTCCCTCTCCCCACGGTCTCCCTCTCATGCGGAGCCGAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGCACGCGCCGCCACGCCTGACTGGTTTTGGTGGAGACGGGGTTTCGCTGTGTTGGCCGGGCCGGTCTCCAGCCCCTAACCGCGAGTGATCCGCCAACCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTACAACCTCCACCTCCCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCCGGCCGCCCAGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCACCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCAGCAGCCACCCCATCTGGGAAGTGAGGAGCATCTCCGCCCGGCAGCCACCCTGTCCGGGAGGGAGGTGAGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGACCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGCCCAGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATC	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11538:HG2_PB_pbsv_18589:HG4_10X_allpass_3336:HG4_PB_pbsv_18513:HG3_10X_allpass_3480:HG2_10X_allpass_2838:HG4_PB_assemblyticsfalcon_15203:HG2_PB_assemblyticsfalcon_15469:HG2_PB_assemblyticsPBcR_15055:HG3_PB_assemblyticsfalcon_15439:HG3_PB_pbsv_18278:HG3_Ill_GATKHCSBGrefine_11980:HG2_Ill_GATKHCSBGrefine_12122:HG3_PB_SVrefine2PBcRDovetail_9093:HG2_PB_PB10Xdip_18285:HG3_Ill_GATKHCSBGrefine_11979:HG2_Ill_tnscope_1950:HG3_Ill_Krunchall_24128:HG2_Ill_Krunchall_24580:HG3_Ill_MetaSV_3029:HG2_Ill_MetaSV_2879:HG3_Ill_Krunchall_24127:HG4_Ill_Krunchall_24885:HG2_Ill_Krunchall_24579:HG4_Ill_MetaSV_2978:HG4_PB_SVrefine2Falcon1Dovetail_11564:HG3_Ill_SVrefine2DISCOVARDovetail_13099:HG2_PB_SVrefine2PBcRplusDovetail_6433:HG2_PB_SVrefine2PB10Xhap12_13587:HG2_PB_SVrefine2Falcon2Bionano_9155:HG2_PB_SVrefine2Falcon1plusDovetail_6933:HG2_10X_SVrefine210Xhap12_12975:HG4_PB_SVrefine2PBcRDovetail_9345:HG2_Ill_SVrefine2DISCOVARplusDovetail_7540:HG2_10X_SVrefine210Xhap12_12974;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12975:HG2_PB_SVrefine2Falcon1plusDovetail_6933:HG2_PB_SVrefine2Falcon2Bionano_9155:HG2_PB_SVrefine2PB10Xhap12_13587:HG2_PB_SVrefine2PBcRplusDovetail_6433:HG3_Ill_SVrefine2DISCOVARDovetail_13099:HG4_PB_SVrefine2Falcon1Dovetail_11564;NumExactMatchSVs=7;ClusterMaxShiftDist=0.120044;ClusterMaxSizeDiff=0.120044;ClusterMaxEditDist=0.120044;PBcalls=16;Illcalls=14;TenXcalls=5;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1904;DistBack=15642;DistForward=-160;DistMin=-160;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=20:31310838-31312756;PctSeqSimilarity=0.9471;PctSizeSimilarity=0.999;PctRecOverlap=0.9816;SizeDiff=-2;StartDistance=-33;EndDistance=-35;GTMatch=0;TruScore=97;MatchId=2217.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:48:1/1:0:16:0:15:1/1:0:21:1:20:./.:2:22:./.:10:116:2117:.:.
chr20	31327178	HG2_10X_SVrefine210Xhap12_12976	CGCGGTGTCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATAAAGACCATCCTCACTAAAGCGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCAGGGAGTAGTGGCGGGTGCCTGTACTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGTCGAGATTGCACCACTGTACTCCAGCCTCGGTGACAGAGCAAGGCTCTGTATCAAAAAAAAAAAAAAAAAAAATACATAAAAGCACTTAGATCCCTATTGTCCAGTGGCCACTTGCCACATAAGCGCTTGAAAAGGGCTAATCTGACCAGGGGTGGTGGCTCACTCCTGTAATCCCAGCACTTTGGGGGGCCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTCGAGACTACCCTGACCAACATGGCGAAAGCCCATCTCTACTAAAAATACAAGAAAAAATTAGATGGGCATGGTGGTGAACACCTGTAATCTCAGCTACTTGAGTGGCTGCAGCATGAGACTCACTTGAACCCTGTAGGCGGAGGTTTCAGTGAGCCGAGATCACATCCCCGCACTCTAGCCTGGGCAACAAAGCGAGACTGTCTTTAAAAAGAAAAGGGCTGGCCGGAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12976:HG2_10X_allpass_2839:HG4_PB_pbsv_18514:HG2_PB_pbsv_18590:HG4_Ill_GATKHCSBGrefine_12532:HG4_10X_allpass_3337:HG2_Ill_MetaSV_2880:HG2_Ill_GATKHCSBGrefine_12124:HG2_Ill_tnscope_1951:HG4_Ill_MetaSV_2979:HG4_PB_SVrefine2PBcRDovetail_9346:HG2_PB_SVrefine2PBcRplusDovetail_6434:HG2_PB_SVrefine2PB10Xhap12_13588:HG2_PB_SVrefine2Falcon2Bionano_9156:HG2_PB_SVrefine2Falcon1plusDovetail_6934:HG2_Ill_SVrefine2DISCOVARplusDovetail_7541;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12976:HG4_PB_SVrefine2PBcRDovetail_9346:HG2_PB_SVrefine2PBcRplusDovetail_6434:HG2_PB_SVrefine2PB10Xhap12_13588:HG2_PB_SVrefine2Falcon2Bionano_9156:HG2_PB_SVrefine2Falcon1plusDovetail_6934:HG2_Ill_SVrefine2DISCOVARplusDovetail_7541;NumExactMatchSVs=7;ClusterMaxShiftDist=0.243017;ClusterMaxSizeDiff=0.243017;ClusterMaxEditDist=0.243017;PBcalls=7;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-672;DistBack=9177;DistForward=-486;DistMin=-486;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=288;REFWIDENED=20:31327179-31328138;PctSeqSimilarity=0.9189;PctSizeSimilarity=1;PctRecOverlap=0.7266;SizeDiff=0;StartDistance=-184;EndDistance=-184;GTMatch=0;TruScore=88;MatchId=2218.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:0|1:26:4:1:20:./.:44:0:16:7:./.:68:6:./.:55:6:.:.:.
chr20	31525487	HG2_PB_SVrefine2Falcon1plusDovetail_6935	TGATCTTGACTCACTGCAACCTCTGCCTCCGGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCACATTGGCTAGGCTGGTCTCGAACTCCCAACCTCGTGATCCGCCCACCATGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACACCTGGCTAAAGAATTAATGTCAATTGCTCACAAACTCTTCCAAAAGAGTTCTCTATGAGGCCAGTATTACCTTGATACCAAAACCAGATAAAGATATCACAGGAAAATAAAACTGTAGACCAAATATTTTTATGAATATAGATACAAAAATCTTCAAAATACTAGCAAATTGAAACCAACAACATATGAAAATGATTATACACCATGACCAAGTAAGATTTATCCCAGGAATGCAAAGTTGGCTAAATATCCAAAATCAATTAATGTAATACACCATATTAACTGAATAAAAAACAAAAGCCATATGATTATGCCAATAGATGCAAAAAGAGCATTTAACAAAATTGAACACCGTTTTCTGATTGAAACACCCAATAAACTAGAAATAGAAACTCCTTCAACCTGATAAAAGCCATTTATGAAAACTCACAGGTAGCATAAAACTTCATGTTGAAATATTAAATACTTTCCTGTAAAATCAGAAATAAAACAAGAATGGTTACTCTTGCCACCCCAATTTAACATTTTATTGGGAGGTCAGTTAGGCAAGAAAATGAAATAAAAAGTATCTATATTGGGGAGGAAGAAGTTAACTATCTCTATCTGCAGATGACATAATCTTATATCTAGAAAATCCTAAATAATTTATTAAAAACTATTAAAACTAATAAATTCAATAGGGTTGCTTGATATAAATATACAAAACCAATATATTTATATACACTAGCAATAAACAATCTGAAAATGAAAATTTAAAAATTTCACTTATAATCGCATCAAAAAAATACTTAGGAATAAATTTGGAAAAGTAGTGCAAAACTTGATTCCTGAAAATTGCATAACATTATGGGAAGAGATGAAAGAATACCCAAATAAATGGAAATACATCTCATGTTCATTGATTGGAAGACTGGATGTTGTTAATATAGCATATTCCCCAAATTGATTTAATGCAATTTATATCAAAATCCCAGCTGCTTTCTCTTCTCTTTTCTCTTCCCTTTTCTTTTTCTTTTCTTTTCTTCCTTCCCTCCCTCCCTTCCTTCCTTCCTTTCTTTTTCTTTCTTTTCCTTCCCTTCCTTCCTTCCTTCCCTCCTTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCGTTTCTCTCTTTCTTTCTTTCTCTCTCCCCAACTTCTTTCTTTTTTCTTTTCCTTCCTTCCTTTCTTTCTCTCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTCTCTCTCTCTCTCTCTCTCTCTTTCCCTCCCTCCCTGCCTTCCTTCCTTCCATATTCTCTCTCTCTCTCTCCTTTTTTTTTTTGTTTTTTGTTTTTTGACAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTCCGCCTCCCAGGTTCAAACGATTTTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGTGCCACCATGCCTGACTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTATTGGTCACGCTGGTCTCAAACTCCTGACTTTGTGGTCCGCCTGCCTTGGCCTCTCAAAGTGCTTGGATTGCAGGCATGAGCCACCTCGCCTGGCGGGCTGGCTTTCTTTTCTTCCTTCCTTCCCTCCTTTTCTCCCTCCCTTCCTCCCTCCTTTCTCTCTCTGTCTCTCTTTTTCTTTTTTTCTCCCTTCCTTCCTTCTCTCTCTCTCTTTTTTTTTTCTTCTATTTGACAGAGTCTTGCTCTGGTACCCAGGCTGGAGTGCAGTGGCGCCACCTCGGTTCACTGCAACCTCCGCCTCCCAGATTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCCCGCCACCATGCCTGGCTAATTTTTGTATTTTCAGTAGAGATGGGGTTTTGCCATGTTGGCCAAGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACTCGCCTCAGCCTCCCAAAGTGCTACGATTACAGGCATGAGCCACTGTGCCTGCCTGCCTGCCTGCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTGCTTTTTGGAGATACAAGGGATATAGATAGTAAGAAAAAAATCTTGAGAAAGAACAGAGTTGAAGGACTCACAATTCCCAAGTTCAAAACTGAATATGAAGTTAAGTAATCAAGACAATGTGATACTGGCATAAAGAAAGACATGTAAATCAATGGAATAGAATTTAGAGTTAAAAAATAAATTCTCACATTATGATCAATTGATTTTTGACAAGAATGCTGAGACAATCAAATGGGGAGAAATAATATATTTTTTAAAACATGTCCTGCTGGGACAATAGGGATAACTTTATCTGTATTAGAAGAATGAAGTTAGACTCCTACCTCATAACACATACAAAAATTAACTCCAAATGGATCATAGACCTAAATGTAAGAGCCAAAATTATAAGACTTTTAGAAGAAAATAAATGGAAAATACTTGTGACCTTAGACAGTGTGTCTTAGATATGACACCAAAAACAAGCTACAAAAGAAAAAAACAGATAAATTGGACTTTGTCAAAATTAAAAACTTTTGGGCTGCAAAGGATACCGTCAAGAAAGTGAAAGGGTAACCTGAAAGAAAATACTTGCAAATCATATATCTGATAAGGGACTAGTATCCAGAATATATAAAGCACTCTTGCAACTTGATAAAAATGATAAATAACCAAATTAAGATACGGGTAAAGGATCTAAATAAACATTTCTTCAAAGAAGATGTACAAATGGCTAATAAGTATATTAAATGATGGTGAACATCATTAGCTATCAGGGAAATGCATATTAAAACTATAATGAGATCCCACTTTACACTTGCCAGGATAACTATAGATAATAGCAATGGTTGGCTGGGATGTGGACAAACTGGGACTCTTACACATTGCTGGATAGAATGTAGAAAGCTGGCCAGGTACGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATTATGAGGTCAGGAGTTTGAGACCAGCCTGGCCAGCATGGTGTAACCCCGTCTCTACTAAACATACAAAAATTAGCAGGGCATGATGGCGGGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCAGAGATCATGCCATTGCGTTCCAGTCTGGGCAACAAGAGCAAAACTCCAAACTCTGTTTAAAAAAAAAAAAAGAAAAAGAACATAGAAAGCTGCAGTCACTTTGGAAAACAGTCTGGCAGTTCCTCAAAAATTAAGTGTAGACTTACCATATTACCCAACAGTTCCACTCCCAAGTGTATACCCAAGAGAAATGAAAACATATGTTCACATAAAATCTTGTACATGAATGTTTATAGTAGCATTATTTATAATACAAAAGTGGAAACAACCCAAATGTCAACTTCCAAATGGATAAAGTGTGGTATGGTGATACAATGGAATGTTATTTAATAATAAAAAGGAATAAAGTACTGATGCATGCAACAACATGGATGAACCTTGAA	GTGGAGTAC	20	PASS	ClusterIDs=HG2_Ill_Krunchall_24581:HG2_PB_pbsv_18591:HG4_PB_pbsv_18515:HG2_Ill_tnscope_1952:HG4_Ill_SVrefine2DISCOVARDovetail_12924:HG2_PB_SVrefine2PBcRplusDovetail_6435:HG2_PB_SVrefine2PB10Xhap12_13590:HG2_PB_SVrefine2Falcon1plusDovetail_6935:HG2_Ill_SVrefine2DISCOVARplusDovetail_7542:HG2_10X_SVrefine210Xhap12_12977:HG2_PB_assemblyticsfalcon_15471:HG2_PB_assemblyticsPBcR_15058:HG4_Ill_MetaSV_2980:HG2_Ill_MetaSV_2881:HG2_10X_allpass_2840:HG4_10X_allpass_3338;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12977:HG2_Ill_SVrefine2DISCOVARplusDovetail_7542:HG2_PB_SVrefine2Falcon1plusDovetail_6935:HG2_PB_SVrefine2PB10Xhap12_13590:HG2_PB_SVrefine2PBcRplusDovetail_6435:HG4_Ill_SVrefine2DISCOVARDovetail_12924;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0028216;ClusterMaxSizeDiff=0.0028216;ClusterMaxEditDist=0.0028216;PBcalls=7;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-3894;DistBack=-2388;DistForward=-1502;DistMin=-2388;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=20:31525487-31529389;PctSeqSimilarity=0.9643;PctSizeSimilarity=0.999;PctRecOverlap=0.999;SizeDiff=-4;StartDistance=-1;EndDistance=3;GTMatch=0;TruScore=98;MatchId=2219.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:40:0|1:39:1:0:24:0|1:50:0:0:45:0/1:52:23:0/1:275:149:3981:.:.
chr20	32043585	HG4_Ill_SVrefine2DISCOVARDovetail_12927	TGGCTTTTTCTTTTTTTTTCACCCTCGAGACAGAGTCTTGCTCTGTCACCCAGGCTGTAGCGCAGTGGCCCGATCTTGGCTCACCGTAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCTTCAGCCTCCCGAGTAGCTGGGATTACAGGTGCGTCCCAGCACGCCGGCTAATTTTTGTATTTTTAGTTAAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCATGATCCGCCCACCTTGGCCTCCCAAACTGTTGGGATTATAGGCATGAGCCACCCGGCCGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGTTTCTTTTTTGTTTATTTCTTTGTTTTTGGAGAAGGGGGTCTCAATCCATCACCCAGGCTGGAGTGCAGTCGTGCAATCATGGCTCACTGCAACCTCCACCTCCCAGACTCAAGTGATCCTCCCACCTCAGCCTCCTGACTAGCTGTGATTACCAGTGTGCACCAATTTTTTTTTTCCCGTAGAGACAGGGTTTCACCATGTTGCCCAGGCTAGTTTGGAACTCCTGAGTTCATTTGATCCACCTACCTCAGCCTCCCAAAGTGCTGGGATTACAGGGGTGAGCCACCACACCCTGCAGGGTTTGGCTTTTTGGCTGGAGATGGTGAAAGGCCA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12981:HG2_PB_HySA_33665:HG4_PB_pbsv_18523:HG3_PB_HySA_27788:HG2_PB_pbsv_18594:HG4_Ill_MetaSV_2982:HG3_Ill_MetaSV_3031:HG2_Ill_MetaSV_2882:HG4_PB_HySA_26860:HG3_PB_pbsv_18281:HG4_PB_pbsv_18522:HG4_PB_SVrefine2PBcRDovetail_9349:HG4_PB_SVrefine2Falcon1Dovetail_11566:HG4_Ill_SVrefine2DISCOVARDovetail_12927:HG3_PB_SVrefine2PBcRDovetail_9095:HG3_PB_SVrefine2Falcon1Dovetail_11540:HG3_Ill_SVrefine2DISCOVARDovetail_13105:HG2_PB_SVrefine2PBcRplusDovetail_6438:HG2_PB_SVrefine2PB10Xhap12_13593:HG2_PB_SVrefine2Falcon2Bionano_9159:HG2_PB_SVrefine2Falcon1plusDovetail_6938:HG2_Ill_SVrefine2DISCOVARplusDovetail_7545;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12981:HG4_PB_SVrefine2PBcRDovetail_9349:HG4_PB_SVrefine2Falcon1Dovetail_11566:HG4_Ill_SVrefine2DISCOVARDovetail_12927:HG3_PB_SVrefine2PBcRDovetail_9095:HG3_PB_SVrefine2Falcon1Dovetail_11540:HG3_Ill_SVrefine2DISCOVARDovetail_13105:HG2_PB_SVrefine2PBcRplusDovetail_6438:HG2_PB_SVrefine2PB10Xhap12_13593:HG2_PB_SVrefine2Falcon2Bionano_9159:HG2_PB_SVrefine2Falcon1plusDovetail_6938:HG2_Ill_SVrefine2DISCOVARplusDovetail_7545;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0131675;ClusterMaxSizeDiff=0.0131675;ClusterMaxEditDist=0.013245;PBcalls=15;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-683;DistBack=978;DistForward=-168;DistMin=-168;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=685;REFWIDENED=20:32043586-32044953;PctSeqSimilarity=0.9983;PctSizeSimilarity=0.9985;PctRecOverlap=0.5585;SizeDiff=1;StartDistance=-302;EndDistance=-301;GTMatch=0;TruScore=85;MatchId=2220.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:42:1/1:1:12:0:17:./.:0:0:0:0:./.:0:0:./.:2:11:.:.:.
chr20	32815928	HG4_PB_SVrefine2PBcRDovetail_9353	ATAGAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTGATTAATTTTTATTTATTTTTTTTATTTTTTCCTTTGGAAACTACTTTATTTTTTATTTATTTTTTTTTTGAACATATGTATTTGTCAATATATTTTTGGCTGATGTGTTTACACAGGAAAAAATAATATTTACATACTCAAACCTCAGTTCAACATTTTAACAAAACAACATGCAGAAAAGTCTTCACTTCCTTTCTAAATACAAATGCTAGAATGTCGGAATCACACGTGGATGTTTTGAAAAGCGTGCTGAGCCTCCTCAAGGGTCATGGAGCTGCACATGCTACGACACCAAAGCAACTGGGTTTTGTTGGTTTTGTGGCAGTTGCTTATTAATATGTAATTTACATTCAGTAAAATCTGCCTTTTATTTTTTTTTTATTTTTTATTTTTAAATTTATTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGAGTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAACAGGATCCCAAGGCAGAGGAATTTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTGGGCACACCTCCCAGACGGGGTGGTGGCTGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGTGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCAGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCACCCCTCACCTCCCGGAAGGGGCGGCTGGCCGGGCGGGGGGCCGACACCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACACCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCACACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCAGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCAGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCACCCCTCACCTCCCGGAAGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCTGGCCGGGGCTGACCCCCCCGCACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCAGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCATCTTCCAGACGGGGTCGCGGCTGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGCTGGGAAGAGGCGCTCCTCACTGCCTAGATGGGATGGCGGCCGGGCGGAGACGCTCCTCACTTTCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGCTCCTTGCCCTCGGGCCCCGCGGGGCCCGTCCGCTCCTCCAGCCGCTGCCTCCCGGGCGGCGCTCGCCGGCGCGGCGGCAAAGACTGAGC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12986:HG3_10X_allpass_3481:HG4_10X_allpass_3340:HG2_10X_allpass_2842:HG3_PB_assemblyticsfalcon_15448:HG2_PB_assemblyticsfalcon_15484:HG2_PB_assemblyticsPBcR_15072:HG4_PB_assemblyticsfalcon_15210:HG4_Ill_Krunchall_24894:HG3_PB_pbsv_18285:HG3_Ill_Krunchall_24137:HG2_Ill_Krunchall_24591:HG4_PB_pbsv_18527:HG2_PB_HySA_33674:HG2_PB_HySA_33673:HG2_Ill_tnscope_1953:HG4_PB_SVrefine2PBcRDovetail_9353:HG4_PB_SVrefine2Falcon1Dovetail_11568:HG4_Ill_SVrefine2DISCOVARDovetail_12929:HG4_Ill_MetaSV_2985:HG4_Ill_GATKHCSBGrefine_12536:HG3_PB_SVrefine2PBcRDovetail_9097:HG3_PB_SVrefine2Falcon1Dovetail_11544:HG3_Ill_SVrefine2DISCOVARDovetail_13109:HG3_Ill_MetaSV_3033:HG3_Ill_GATKHCSBGrefine_11987:HG2_PB_pbsv_18598:HG2_PB_SVrefine2PBcRplusDovetail_6442:HG2_PB_SVrefine2PB10Xhap12_13598:HG2_PB_SVrefine2Falcon2Bionano_9163:HG2_PB_SVrefine2Falcon1plusDovetail_6942:HG2_Ill_breakscan11_2661:HG2_Ill_SVrefine2DISCOVARplusDovetail_7547:HG2_Ill_MetaSV_2884:HG2_Ill_GATKHCSBGrefine_12127;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12986:HG4_PB_SVrefine2PBcRDovetail_9353:HG4_PB_SVrefine2Falcon1Dovetail_11568:HG4_Ill_SVrefine2DISCOVARDovetail_12929:HG4_Ill_MetaSV_2985:HG4_Ill_GATKHCSBGrefine_12536:HG3_PB_SVrefine2PBcRDovetail_9097:HG3_PB_SVrefine2Falcon1Dovetail_11544:HG3_Ill_SVrefine2DISCOVARDovetail_13109:HG3_Ill_MetaSV_3033:HG3_Ill_GATKHCSBGrefine_11987:HG2_PB_pbsv_18598:HG2_PB_SVrefine2PBcRplusDovetail_6442:HG2_PB_SVrefine2PB10Xhap12_13598:HG2_PB_SVrefine2Falcon2Bionano_9163:HG2_PB_SVrefine2Falcon1plusDovetail_6942:HG2_Ill_breakscan11_2661:HG2_Ill_SVrefine2DISCOVARplusDovetail_7547:HG2_Ill_MetaSV_2884:HG2_Ill_GATKHCSBGrefine_12127;NumExactMatchSVs=20;ClusterMaxShiftDist=0.00576894;ClusterMaxSizeDiff=0.00576894;ClusterMaxEditDist=0.00576894;PBcalls=17;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=17;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3297;DistBack=4604;DistForward=4404;DistMin=4404;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=20:32815929-32819235;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2221.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:69:1/1:0:17:0:9:1/1:0:22:0:16:1/1:0:44:1/1:6:262:3302:.:.
chr20	33115811	HG3_Ill_manta_4015	TAAAAACTACCCTACTGGAGTAGCCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1199:HG4_10X_allpass_3341:HG4_Ill_Krunchall_24895:HG3_Ill_Krunchall_24140:HG2_Ill_Krunchall_24593:HG4_PB_assemblyticsfalcon_15212:HG3_PB_assemblyticsfalcon_15451:HG2_PB_assemblyticsfalcon_15486:HG2_PB_assemblyticsPBcR_15074:HG2_PB_pbsv_18600:HG3_PB_pbsv_18286:HG3_Ill_MetaSV_3034:HG2_PB_HySA_33681:HG2_Ill_tnscope_1954:HG2_Ill_MetaSV_2885:HG4_PB_pbsv_18529:HG4_PB_SVrefine2PBcRDovetail_9354:HG4_PB_SVrefine2Falcon1Dovetail_11569:HG4_Ill_MetaSV_2986:HG4_Ill_GATKHCSBGrefine_12537:HG3_PB_SVrefine2PBcRDovetail_9098:HG3_PB_SVrefine2Falcon1Dovetail_11545:HG3_Ill_scalpel_17539:HG3_Ill_manta_4015:HG3_Ill_SVrefine2DISCOVARDovetail_13111:HG3_Ill_GATKHCSBGrefine_11988:HG3_10X_allpass_3482:HG2_PB_SVrefine2PBcRplusDovetail_6443:HG2_PB_SVrefine2PB10Xhap12_13599:HG2_PB_SVrefine2Falcon2Bionano_9164:HG2_PB_SVrefine2Falcon1plusDovetail_6943:HG2_Ill_scalpel_17202:HG2_Ill_manta_4918:HG2_Ill_SVrefine2DISCOVARplusDovetail_7548:HG2_Ill_GATKHCSBGrefine_12129:HG2_10X_allpass_2843:HG2_10X_SVrefine210Xhap12_12987:HG2_Ill_breakscan11_2663:HG4_Ill_Spiral_1428:HG3_Ill_Spiral_18739;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12987:HG2_10X_allpass_2843:HG2_Ill_GATKHCSBGrefine_12129:HG2_Ill_SVrefine2DISCOVARplusDovetail_7548:HG2_Ill_manta_4918:HG2_Ill_scalpel_17202:HG2_PB_SVrefine2Falcon1plusDovetail_6943:HG2_PB_SVrefine2Falcon2Bionano_9164:HG2_PB_SVrefine2PB10Xhap12_13599:HG2_PB_SVrefine2PBcRplusDovetail_6443:HG3_10X_allpass_3482:HG3_Ill_GATKHCSBGrefine_11988:HG3_Ill_SVrefine2DISCOVARDovetail_13111:HG3_Ill_manta_4015:HG3_Ill_scalpel_17539:HG3_PB_SVrefine2Falcon1Dovetail_11545:HG3_PB_SVrefine2PBcRDovetail_9098:HG4_Ill_GATKHCSBGrefine_12537:HG4_Ill_MetaSV_2986:HG4_PB_SVrefine2Falcon1Dovetail_11569:HG4_PB_SVrefine2PBcRDovetail_9354:HG4_PB_pbsv_18529;NumExactMatchSVs=22;ClusterMaxShiftDist=0.12;ClusterMaxSizeDiff=0.12;ClusterMaxEditDist=0.12;PBcalls=16;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-333;DistBack=5569;DistForward=-314;DistMin=-314;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=20:33115812-33116164;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2222.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:58:./.:0:4:0:4:1/1:0:10:0:9:1/1:0:49:./.:1:14:.:.:.
chr20	33477172	HG2_10X_allpass_2844	TCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGTGCCACTGCGCCTGGCCAATTTTTGTATTTTTAGTAGAGACAGGTTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTTGTGACCCGCCCG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12989:HG2_PB_pbsv_18602:HG2_PB_assemblyticsfalcon_15490:HG3_PB_HySA_27795:HG3_PB_pbsv_18288:HG4_PB_pbsv_18531:HG2_PB_HySA_33686:HG4_PB_SVrefine2PBcRDovetail_9356:HG4_PB_HySA_26867:HG4_Ill_svaba_22689:HG4_Ill_manta_4179:HG4_Ill_GATKHCSBGrefine_12539:HG4_10X_allpass_3344:HG3_Ill_svaba_22956:HG3_Ill_scalpel_17543:HG3_Ill_GATKHC_29069:HG3_Ill_GATKHCSBGrefine_11990:HG3_10X_allpass_3484:HG2_PB_SVrefine2Falcon1plusDovetail_6944:HG2_Ill_svaba_22736:HG2_Ill_scalpel_17206:HG2_Ill_manta_4919:HG2_Ill_GATKHC_29156:HG2_Ill_GATKHCSBGrefine_12131:HG2_10X_allpass_2844:HG4_PB_SVrefine2Falcon1Dovetail_11571:HG3_PB_SVrefine2PBcRDovetail_9099:HG3_PB_SVrefine2Falcon1Dovetail_11546:HG3_Ill_SVrefine2DISCOVARDovetail_13114:HG2_PB_SVrefine2PBcRplusDovetail_6444:HG2_PB_SVrefine2PB10Xhap12_13600:HG2_PB_SVrefine2Falcon2Bionano_9165:HG2_Ill_SVrefine2DISCOVARplusDovetail_7551;NumClusterSVs=33;ExactMatchIDs=HG2_10X_allpass_2844:HG2_Ill_GATKHCSBGrefine_12131:HG2_Ill_GATKHC_29156:HG2_Ill_manta_4919:HG2_Ill_scalpel_17206:HG2_Ill_svaba_22736:HG2_PB_SVrefine2Falcon1plusDovetail_6944:HG3_10X_allpass_3484:HG3_Ill_GATKHCSBGrefine_11990:HG3_Ill_GATKHC_29069:HG3_Ill_scalpel_17543:HG3_Ill_svaba_22956:HG4_10X_allpass_3344:HG4_Ill_GATKHCSBGrefine_12539:HG4_Ill_manta_4179:HG4_Ill_svaba_22689:HG4_PB_HySA_26867:HG4_PB_SVrefine2PBcRDovetail_9356;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0223881;ClusterMaxSizeDiff=0.0223048;ClusterMaxEditDist=0.208178;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=12;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-133;DistBack=33554;DistForward=-117;DistMin=-117;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=158;REFWIDENED=20:33477056-33477346;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2223.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:33:0:7:1/1:0:13:0:12:1/1:0:42:./.:.:.:.:.:.
chr20	33621655	HG3_10X_allpass_3485	TAAAAGAGTAAAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12991:HG2_10X_allpass_2845:HG2_Ill_breakscan11_2664:HG3_Ill_Spiral_18742:HG4_Ill_MetaSV_2988:HG3_Ill_MetaSV_3035:HG2_Ill_MetaSV_2886:HG4_Ill_scalpel_16811:HG4_Ill_manta_4180:HG4_Ill_GATKHCSBGrefine_12540:HG4_10X_allpass_3345:HG3_Ill_scalpel_17546:HG3_Ill_manta_4016:HG3_Ill_GATKHCSBGrefine_11991:HG3_10X_allpass_3485:HG2_Ill_manta_4920:HG2_Ill_GATKHCSBGrefine_12132:HG3_PB_pbsv_18289:HG2_PB_pbsv_18603:HG2_Ill_tnscope_1955:HG4_PB_pbsv_18532:HG4_PB_HySA_26868:HG4_PB_SVrefine2PBcRDovetail_9357:HG4_PB_SVrefine2Falcon1Dovetail_11572:HG4_Ill_SVrefine2DISCOVARDovetail_12931:HG3_PB_SVrefine2Falcon1Dovetail_11547:HG3_Ill_SVrefine2DISCOVARDovetail_13116:HG2_PB_SVrefine2Falcon2Bionano_9166;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12132:HG2_Ill_manta_4920:HG3_10X_allpass_3485:HG3_Ill_GATKHCSBGrefine_11991:HG3_Ill_manta_4016:HG3_Ill_scalpel_17546:HG4_10X_allpass_3345:HG4_Ill_GATKHCSBGrefine_12540:HG4_Ill_manta_4180:HG4_Ill_scalpel_16811;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0184615;ClusterMaxSizeDiff=0.0184615;ClusterMaxEditDist=0.0337942;PBcalls=8;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-322;DistBack=22213;DistForward=-316;DistMin=-316;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=20:33621649-33621988;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2224.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:28:0|1:26:0:0:24:1|0:0:12:22:0:0/1:22:24:0/1:25:18:.:.:.
chr20	33716057	HG2_Ill_MetaSV_2887	GCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAATCCGGGAGGTGGAGTTTGTAGTGAGCGGAGATCACACCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCTGTCTCCAAAAAAAATAAAAACAAAAACAAAAATTAGCTGGGCGTAGTGGTGGGTGCCTATAATCCCAGCTGCTCAGGAGGCTAAGACAGGAAAATCACAGGAGAATTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATGGTGCCACTGCACTCCAGCCTGGGCAACATAAGCAAAACTCTGTCTAAAAAAAAAAAAAAAATGAAACAGCTTCAGGCAGGTCCTTCAAGGAATTCCAGAAGGCATTGTTATCAATCATCTGAGATAACAACAGTTCTGTGAGTGTTACTGCCCCCAAAGACCTTCTAGCAGGATAACATGGGGAAGTGGAAGACAGTGATATTGATGATACTGACCCTAGGCCTAGGCTAATGTGTGTTTGTAGCTTAGTTTTTAACAAAAAAGTCTAAAAGGTGAAAACAAAATAAAAAACTAAAAACAGAAAAAAACTTAGAGAATAAGGATATAAATAAAATATTTCTGTATAGCTGTACAATGTGTTTTAAGCTAAGCATTATTACAAATGAGTCAAAAAGTTTTTTAAAATTTTAAAGTTCATAAAGTAAAAAAGTTACAGTAAGCTAACGTTAATTTATTATTGGAGGCCAGGCATGGTGGCTCA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6946:HG2_PB_assemblyticsfalcon_15492:HG4_10X_allpass_3346:HG2_PB_pbsv_18605:HG2_Ill_tnscope_1956:HG4_Ill_MetaSV_2989:HG4_Ill_GATKHCSBGrefine_12542:HG2_Ill_MetaSV_2887:HG2_Ill_GATKHCSBGrefine_12134:HG2_10X_allpass_2846:HG2_PB_SVrefine2PBcRplusDovetail_6446:HG2_PB_SVrefine2PB10Xhap12_13602:HG2_PB_SVrefine2Falcon2Bionano_9168;NumClusterSVs=13;ExactMatchIDs=HG2_10X_allpass_2846:HG2_Ill_GATKHCSBGrefine_12134:HG2_Ill_MetaSV_2887:HG4_Ill_GATKHCSBGrefine_12542:HG4_Ill_MetaSV_2989;NumExactMatchSVs=5;ClusterMaxShiftDist=0.10281;ClusterMaxSizeDiff=0.10281;ClusterMaxEditDist=0.10281;PBcalls=6;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-747;DistBack=279;DistForward=-746;DistMin=-746;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=TRUE;HG003_GT=0/0;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=38;REFWIDENED=20:33716048-33716832;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2225.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:29:26:0|1:25:4:3:17:1|0:0:36:72:0:0/1:64:10:0/1:64:21:.:.:.
chr20	35815609	HG4_PB_SVrefine2Falcon1Dovetail_11581	TAAGATCAATCATTTGGCGGGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACACCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_27811:HG4_PB_assemblyticsfalcon_15235:HG2_PB_assemblyticsfalcon_15507:HG3_PB_assemblyticsfalcon_15474:HG2_PB_assemblyticsPBcR_15098:HG4_PB_pbsv_18542:HG3_Ill_Krunchall_24162:HG2_PB_pbsv_18613:HG3_PB_pbsv_18303:HG4_Ill_MetaSV_2992:HG3_Ill_MetaSV_3038:HG2_PB_HySA_33709:HG2_Ill_tnscope_1957:HG2_Ill_MetaSV_2890:HG4_PB_SVrefine2PBcRDovetail_9363:HG4_PB_SVrefine2Falcon1Dovetail_11581:HG4_Ill_svaba_22704:HG4_Ill_scalpel_16821:HG4_Ill_manta_4181:HG4_Ill_SVrefine2DISCOVARDovetail_12941:HG4_Ill_GATKHCSBGrefine_12544:HG4_10X_allpass_3348:HG3_PB_SVrefine2PBcRDovetail_9110:HG3_PB_SVrefine2Falcon1Dovetail_11557:HG3_Ill_svaba_22978:HG3_Ill_scalpel_17563:HG3_Ill_manta_4021:HG3_Ill_SVrefine2DISCOVARDovetail_13135:HG3_Ill_GATKHCSBGrefine_12001:HG3_10X_allpass_3487:HG2_PB_SVrefine2PBcRplusDovetail_6453:HG2_PB_SVrefine2PB10Xhap12_13608:HG2_PB_SVrefine2Falcon2Bionano_9175:HG2_PB_SVrefine2Falcon1plusDovetail_6953:HG2_Ill_svaba_22748:HG2_Ill_manta_4923:HG2_Ill_SVrefine2DISCOVARplusDovetail_7564:HG2_Ill_GATKHCSBGrefine_12137:HG2_10X_allpass_2847:HG2_10X_SVrefine210Xhap12_13014;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13014:HG2_10X_allpass_2847:HG2_Ill_GATKHCSBGrefine_12137:HG2_Ill_SVrefine2DISCOVARplusDovetail_7564:HG2_Ill_manta_4923:HG2_Ill_svaba_22748:HG2_PB_SVrefine2Falcon1plusDovetail_6953:HG2_PB_SVrefine2Falcon2Bionano_9175:HG2_PB_SVrefine2PB10Xhap12_13608:HG2_PB_SVrefine2PBcRplusDovetail_6453:HG3_10X_allpass_3487:HG3_Ill_GATKHCSBGrefine_12001:HG3_Ill_SVrefine2DISCOVARDovetail_13135:HG3_Ill_manta_4021:HG3_Ill_scalpel_17563:HG3_Ill_svaba_22978:HG3_PB_SVrefine2Falcon1Dovetail_11557:HG3_PB_SVrefine2PBcRDovetail_9110:HG4_10X_allpass_3348:HG4_Ill_GATKHCSBGrefine_12544:HG4_Ill_SVrefine2DISCOVARDovetail_12941:HG4_Ill_manta_4181:HG4_Ill_scalpel_16821:HG4_Ill_svaba_22704:HG4_PB_SVrefine2Falcon1Dovetail_11581:HG4_PB_SVrefine2PBcRDovetail_9363;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0912052;ClusterMaxSizeDiff=0.0912052;ClusterMaxEditDist=0.0912052;PBcalls=17;Illcalls=19;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-312;DistBack=7816;DistForward=1792;DistMin=1792;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:35815610-35815935;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2226.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:61:1/1:1:34:0:22:1/1:0:31:0:23:1/1:0:48:0/1:2:10:.:.:.
chr20	37524548	HG2_PB_assemblyticsfalcon_15531	CCTTCTTTCTTCCCTCCCTCCCTCCTTCCTTCTTTCTTCCCTCCCTCCCTCCTTT	C	10	PASS	ClusterIDs=HG3_PB_pbsv_18315:HG2_PB_assemblyticsPBcR_15113:HG2_PB_assemblyticsfalcon_15531:HG2_PB_pbsv_18627;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsfalcon_15531;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0720721;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-54;DistBack=138;DistForward=-32;DistMin=-32;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=20:37524547-37524639;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2227.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:23:./.:10:8:9:6:./.:1:8:15:3:0/1:7:7:./.:.:.:.:.:.
chr20	39886355	HG2_Ill_breakscan11_2666	AATTCTCCTGCCTCAGCCTCCTTAGTAGCTGGGACTACAGGCACACGCCACCATGCCTGGCTAAGTTTTCGTATTTTTAGTAGAGACGGGGTTTCACCATGCTAGCCAGGCTGGTCTCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTTAGCCACCACGCCCAACCCTTTTTTTTTTTGAGACGGAGTTTTGCTCTTGTCAGCCAGGCTGGGGTACAGTGGCACAGCTCACTGCAACCTCCACCTCCCAGGTTCAAGTG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6969:HG2_PB_pbsv_18636:HG2_PB_HySA_33748:HG3_PB_HySA_27841:HG3_Ill_scalpel_17581:HG3_Ill_GATKHCSBGrefine_12016:HG3_10X_allpass_3490:HG2_Ill_scalpel_17240:HG2_Ill_breakscan11_2666:HG2_Ill_SpiralSDKrefine_9841:HG2_Ill_GATKHCSBGrefine_12155:HG3_Ill_MetaSV_3042:HG3_PB_pbsv_18323:HG2_Ill_tnscope_1958:HG3_PB_SVrefine2Falcon1Dovetail_11572:HG3_Ill_SVrefine2DISCOVARDovetail_13147:HG2_PB_SVrefine2PB10Xhap12_13623:HG2_PB_SVrefine2Falcon2Bionano_9188:HG2_Ill_SVrefine2DISCOVARplusDovetail_7578:HG2_10X_SVrefine210Xhap12_13026;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12155:HG2_Ill_SpiralSDKrefine_9841:HG2_Ill_breakscan11_2666:HG2_Ill_scalpel_17240:HG3_10X_allpass_3490:HG3_Ill_GATKHCSBGrefine_12016:HG3_Ill_scalpel_17581:HG3_PB_HySA_27841;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0240137;ClusterMaxSizeDiff=0.0240137;ClusterMaxEditDist=0.0823328;PBcalls=8;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-288;DistBack=37640;DistForward=-286;DistMin=-286;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=282;REFWIDENED=20:39886259-39886828;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2228.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:32:0|1:27:4:1:14:1|0:0:11:43:1:0/1:34:14:./.:.:.:.:.:.
chr20	39906230	HG2_PB_SVrefine2PB10Xhap12_13624	TTTTTTTTTTCTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGTTGGAGTGCAGTGGTGTGATCTCCGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCTACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCACGCCCGGCCCCCTCCATGTCAAATATTTTAAGCATGTTTTAAATGCAGAAAGTATAGTGTAGGGGATGGAAAGATTAATTTAAGTGTGGAAAAAAAACTCCCCTGATTACAAGAGCAATACACTTTCAATAAAAGCAAACTGTAAAATACAAAGAAGTAGAGAAGATTATAGCTAGGGGAGGCTGGGTGTGGTGGCTCACGCCTGGGATTGTACACTTTGGGAGGTCGAGGTGGGCAGATCACTTGAGGCCAGGAATTCGAGACTAGCCTGGCCAACATGGTGAAACTACATCTCTACTAAAAATACAAAAATTAGCTGGGTGTTGGGGGTAACACTTGTAGTCCCAGCTACTCGGGAAGCTGGGGCAGGAGAACTGCTTGAACTAGGGAGGCAGAGGTTGCAGTGAGCAGAGATTGTGCCACTGTAACTCCAGCCTGGGTGACAGAGAGAGACCCTGTCTTGAAGGAAAAAAAAAAAGATTATAGTTGGGGGAAAGCTCATGTAAGCCAAAACTATCCACTACCAAAAGATAAGCACTGTCAACATTCTGATGCACATGCACAATTTTAACCATACTGGGATCATACTGCACATATTGGTATTTTTTCTCACTTAAATATAGGTCTGATAAACATCTCTCATGTTATTGAGCATTCTTTGCATCTTTTATTACTACTGAGGTTAAATCTTTTCATGTGATTAGCGGCCATTCATATTTCTTTGTGGAACAGCTTGGCAATTTAGAAAATAATGCCAATATTTTCCTGAATATACTTATTGTAGATATATGGAAAATACAGAAGAGTATAAGACTATAGAGGAAAAAATTCACATAATTCAAATCATAGAAACAATCACTGCTGCTAATTTTTACTTTTCTCTGCACAG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13027:HG4_PB_SVrefine2PBcRDovetail_9376:HG3_PB_pbsv_18324:HG3_10X_allpass_3491:HG4_PB_pbsv_18565:HG4_Ill_MetaSV_2995:HG4_10X_allpass_3351:HG3_Ill_MetaSV_3043:HG2_Ill_MetaSV_2894:HG2_Ill_tnscope_1959:HG4_Ill_SVrefine2DISCOVARDovetail_12954:HG3_PB_SVrefine2Falcon1Dovetail_11573:HG2_PB_pbsv_18637:HG2_PB_SVrefine2PBcRplusDovetail_6466:HG2_PB_SVrefine2PB10Xhap12_13624:HG2_PB_SVrefine2Falcon2Bionano_9189:HG2_PB_SVrefine2Falcon1plusDovetail_6970;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13027:HG4_Ill_SVrefine2DISCOVARDovetail_12954:HG3_PB_SVrefine2Falcon1Dovetail_11573:HG2_PB_pbsv_18637:HG2_PB_SVrefine2PBcRplusDovetail_6466:HG2_PB_SVrefine2PB10Xhap12_13624:HG2_PB_SVrefine2Falcon2Bionano_9189:HG2_PB_SVrefine2Falcon1plusDovetail_6970;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0467128;ClusterMaxSizeDiff=0.0467128;ClusterMaxEditDist=0.0502165;PBcalls=9;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-1180;DistBack=19678;DistForward=-1052;DistMin=-1052;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=295;REFWIDENED=20:39906231-39907705;PctSeqSimilarity=0.9379;PctSizeSimilarity=0.9992;PctRecOverlap=0.9255;SizeDiff=-1;StartDistance=-87;EndDistance=-88;GTMatch=0;TruScore=95;MatchId=2229.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:36:18:0|1:32:0:1:11:./.:6:7:41:0:0/0:59:4:0/1:107:45:.:.:.
chr20	40541069	HG2_Ill_SVrefine2DISCOVARplusDovetail_7584	AACTTCCACCTCCCGGGTTCAAGCAATTCTCCTTCCTCAGCCTCCCGAGTAGCTGGG	A	20	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_15510:HG3_PB_HySA_27843:HG4_PB_assemblyticsfalcon_15271:HG3_PB_pbsv_18326:HG3_Ill_svaba_23012:HG3_Ill_SVrefine2DISCOVARDovetail_13153:HG3_Ill_Krunchall_24194:HG3_Ill_GATKHC_29128:HG3_Ill_GATKHCSBGrefine_12018:HG3_Ill_FB_15561:HG3_Ill_250bpfermikitraw_23613:HG3_Ill_150bpfermikitraw_22931:HG3_CG_vcfBeta_9916:HG2_PB_pbsv_18640:HG2_Ill_svaba_22781:HG2_Ill_scalpel_17242:HG2_Ill_manta_4929:HG2_Ill_SVrefine2DISCOVARplusDovetail_7584:HG2_Ill_Krunchall_24643:HG2_Ill_GATKHC_29218:HG2_Ill_GATKHCSBGrefine_12157:HG2_Ill_FB_15601:HG2_PB_PB10Xdip_18325:HG2_PB_HySA_33754;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_FB_15601:HG2_Ill_GATKHCSBGrefine_12157:HG2_Ill_GATKHC_29218:HG2_Ill_Krunchall_24643:HG2_Ill_SVrefine2DISCOVARplusDovetail_7584:HG2_Ill_manta_4929:HG2_Ill_scalpel_17242:HG2_Ill_svaba_22781:HG2_PB_pbsv_18640:HG3_CG_vcfBeta_9916:HG3_Ill_150bpfermikitraw_22931:HG3_Ill_250bpfermikitraw_23613:HG3_Ill_FB_15561:HG3_Ill_GATKHCSBGrefine_12018:HG3_Ill_GATKHC_29128:HG3_Ill_Krunchall_24194:HG3_Ill_SVrefine2DISCOVARDovetail_13153:HG3_Ill_svaba_23012:HG3_PB_pbsv_18326:HG4_PB_assemblyticsfalcon_15271;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0347826;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=1;PBexactcalls=3;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=1;HG2count=11;HG3count=12;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=3284;DistForward=5401;DistMin=3284;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=20:40541070-40541128;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2230.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:29:1|0:6:19:17:5:1|0:1:24:31:1:0/1:20:8:./.:.:.:.:.:.
chr20	42024594	HG3_PB_SVrefine2Falcon1Dovetail_11580	ATGGTAAAACCCCATTTCTTTTTTTTTTTTTTTTTTTTTAATGTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGTCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGGTTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGTCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAAT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13036:HG4_10X_allpass_3353:HG2_PB_assemblyticsPBcR_15147:HG4_Ill_Krunchall_24960:HG3_Ill_Krunchall_24198:HG2_Ill_Krunchall_24648:HG3_PB_assemblyticsfalcon_15524:HG4_PB_assemblyticsfalcon_15281:HG2_PB_assemblyticsfalcon_15560:HG3_PB_pbsv_18335:HG4_PB_pbsv_18578:HG2_Ill_tnscope_1960:HG4_PB_SVrefine2Falcon1Dovetail_11600:HG4_Ill_SVrefine2DISCOVARDovetail_12967:HG4_Ill_MetaSV_2998:HG4_Ill_GATKHCSBGrefine_12567:HG3_PB_SVrefine2PBcRDovetail_9126:HG3_PB_SVrefine2Falcon1Dovetail_11580:HG3_Ill_SVrefine2DISCOVARDovetail_13159:HG3_Ill_MetaSV_3046:HG3_Ill_GATKHCSBGrefine_12022:HG2_PB_pbsv_18649:HG2_PB_SVrefine2PBcRplusDovetail_6474:HG2_PB_SVrefine2PB10Xhap12_13634:HG2_PB_SVrefine2Falcon2Bionano_9197:HG2_PB_SVrefine2Falcon1plusDovetail_6978:HG2_Ill_breakscan11_2667:HG2_Ill_SVrefine2DISCOVARplusDovetail_7587:HG2_Ill_MetaSV_2896:HG2_Ill_GATKHCSBGrefine_12160:HG2_10X_allpass_2850;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13036:HG4_PB_SVrefine2Falcon1Dovetail_11600:HG4_Ill_SVrefine2DISCOVARDovetail_12967:HG4_Ill_MetaSV_2998:HG4_Ill_GATKHCSBGrefine_12567:HG3_PB_SVrefine2PBcRDovetail_9126:HG3_PB_SVrefine2Falcon1Dovetail_11580:HG3_Ill_SVrefine2DISCOVARDovetail_13159:HG3_Ill_MetaSV_3046:HG3_Ill_GATKHCSBGrefine_12022:HG2_PB_pbsv_18649:HG2_PB_SVrefine2PBcRplusDovetail_6474:HG2_PB_SVrefine2PB10Xhap12_13634:HG2_PB_SVrefine2Falcon2Bionano_9197:HG2_PB_SVrefine2Falcon1plusDovetail_6978:HG2_Ill_breakscan11_2667:HG2_Ill_SVrefine2DISCOVARplusDovetail_7587:HG2_Ill_MetaSV_2896:HG2_Ill_GATKHCSBGrefine_12160:HG2_10X_allpass_2850;NumExactMatchSVs=20;ClusterMaxShiftDist=0.0293871;ClusterMaxSizeDiff=0.0293871;ClusterMaxEditDist=0.0293871;PBcalls=14;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1198;DistBack=46219;DistForward=30598;DistMin=30598;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=18;REFWIDENED=20:42024595-42025810;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2231.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:95:1/1:1:5:0:17:./.:0:24:0:1:1/1:0:42:./.:5:76:1328:.:.
chr20	42271853	HG2_PB_SVrefine2PB10Xhap12_13635	TGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGTTCAGCTGAGGTCAGGAGTTTGAGACCAGCCTGGCGAACATGGTGAAACTCCATCTCTACTAAAAATATAAAAATTAACCAGGTGTGGTGGTGCACGCCTGTAATCCCAGCTACTAGGGAGGCCGAGGCAGGGGAATCTCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATGGCACCACTGTACTCCAGCCTGGGTAAGAGAGTGAGACTCTGTCTCAAAAAAAAAACAAAAAAATAGAGCTGGGTAAGAGGGATCAAGTGTGCTGAGTGTGGCCATGATGACTGGTGAGTATTAAATAGGGAGATCAGGGTGGGTTTCATTGCAAAGTTGTATTGGAGCAAAGATTTGAAGGTGTTGAGAGACTTAGCCATGCAGATATCTGGGGGAGGAGTGTCCCAGGCAGAGGGGAGATGTGTGCAAAGTTCCTAAGGCTGGGCTGTGCCTGGTATGCTTGACGAACGGCAGTGATGCCAGTGTGACAAGAGAACAGAGGAAAGGACAGAGCAGTAGAACATGAGGTGATCACCTTATGTAAGAAATGATTTTCTCAGGCCGGGCACCGTGGCCCACACCTGTAATCCCAGCAATTGGGAGCCCAAGGCGGGCAGATCACAAAGTCAAGAGATTGAGACCATCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGTGCATGCCTGTAGTCCCAGCTCCCATACTCGGGAGGCTGAGACAGGAGAATTGCTTGAACCTGGGAGGCGGAGGTTACAGTAAGCCAAGACCACACCACTGCAGTCCATCCAGCCTGGCGACAGAGCAAGACTCTGTCTCAAAAAAAAAAGAAAAAGAAATCATCTTTCTCTGACTGAGGACCAAGAACTTCAAAATTATCCCTGGCCTTCTTTTTTCCAAGGATTTCAAAAATTGAATGCCCAACCAGCTTTGGTAAATAGGCATTCATACACTACTGATGGAGAATAAGTTGGTTCCACTTGTCTGGAGATATTTTTATAATACTGTTGAAAAGCCCTAAAATGTATATACCGTTGACCCATTCTAATCTTCAGAATTTGTTTTAATAATATAATTCGGAATACGTACAGATTTATCAACCAGGATTCTCAGTGCCACATTATTTTATAGAAGAAAAATCTTCATCAATAGGGAACTGGTTAAGTATCCTAGGGTACATCCATAAGATAAAAAATGTTTTTAAAAATGTTTGGCCAGGAATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCACGAGGTCAGGAGTTCAAGACTAGCCTGACCAACATGGTGAACCCTCCTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCGTGCACCTGTAGTCCCTGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGACAGAGGTTGGCAGTGAGCCAAGAACGTGCCATTGCACTCCAGCCTGGGAGACAGAGTGAGACTCTATCTCAAAAAAATAAATAAAAAATAAAAATAAAAATGTTTAAGGACTTGGGCCAGGCGCTGTGGCTCACATCTGTAATCCCAACACTTTGGGAGGCTGAGGTGGGCGGATCACTTGAGGTCAGGAATTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATAAAAAAATCAGCTGGGTGTGGTGGCCCGTGCCTGTAGTCCCAGTTACTCAGGAGGCTGAGGCAAGAGATTCGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATTGCACCACTGTACTCCAACCTGGGCAACAGAGTAAGACTCAAAAAAAAAAAAGTTTAAGGACTTGGGAATACATTCGTGATACAGTAAATATGTGGTGGGGAGAGACTAAAGAACAGTATATAGAGAGATTCTACTTTCTTTACAGAATACAATACACACATAGAATTATTTTGCATAATAAAAAAATAACATAAAGATATTTATCCTTGGGGCCCAGTGCGGTGGCTCACGCCTGTAATTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACGAGGTCAGGAGATCGAGACCATACTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGCCGTGTTGGCGGGTGCCCATAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCTGAGATCATGCCACTGCACTCCAGCCTGGGTGACAGAGTAAGACTCTGTCCCCCCCAAAAAAAGAAGATATTTATCCTTGGGCTGGGCACAGTGGCTCACGCTTGCAATCCCAGCACTTTGGGGGGCCAAGGTAGGTGAATCATTTAAGCCCAGGAGTTCTAGTCCAGCCTGGGCAACAGAAACTCCACATCCATAAAAAAATACAAAAATTAGCCAGGTGTGGTGGTGTGCACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGTGGGAGGATCATCTGAGCCTGGGGAGGTTGAGGTTGCAGTGAGCAGTGATCATGCCACTGCACTCCATCCAGGGTGATAGAGTGAGACCCTGTTTAAAAAAAAAAAAAAAAGATAGTGTTTAATTTTTATTTTCCTTCTTTATTAAAATTTCTATAGTGGGCCGGGCGC	T	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3047:HG3_PB_pbsv_18337:HG2_10X_allpass_2851:HG3_PB_assemblyticsfalcon_15526:HG2_PB_assemblyticsPBcR_15150:HG4_PB_assemblyticsfalcon_15283:HG2_PB_assemblyticsfalcon_15563:HG3_10X_allpass_3492:HG4_10X_allpass_3354:HG3_PB_pbsv_18336:HG4_Ill_MetaSV_2999:HG4_Ill_GATKHCSBGrefine_12568:HG3_PB_HySA_27855:HG3_Ill_GATKHCSBGrefine_12023:HG2_Ill_SpiralSDKrefine_9849:HG2_Ill_MetaSV_2897:HG2_Ill_GATKHCSBGrefine_12161:HG2_PB_pbsv_18650:HG4_PB_pbsv_18579:HG4_PB_SVrefine2PBcRDovetail_9384:HG4_PB_SVrefine2Falcon1Dovetail_11601:HG4_Ill_SVrefine2DISCOVARDovetail_12970:HG3_PB_SVrefine2PBcRDovetail_9127:HG3_PB_SVrefine2Falcon1Dovetail_11581:HG3_Ill_SVrefine2DISCOVARDovetail_13160:HG2_PB_SVrefine2PBcRplusDovetail_6475:HG2_PB_SVrefine2PB10Xhap12_13635:HG2_PB_SVrefine2Falcon2Bionano_9198:HG2_PB_SVrefine2Falcon1plusDovetail_6979:HG2_Ill_SVrefine2DISCOVARplusDovetail_7589:HG2_10X_SVrefine210Xhap12_13040:HG2_Ill_tnscope_1961:HG2_PB_HySA_33772;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13040:HG2_Ill_SVrefine2DISCOVARplusDovetail_7589:HG2_PB_SVrefine2Falcon1plusDovetail_6979:HG2_PB_SVrefine2Falcon2Bionano_9198:HG2_PB_SVrefine2PB10Xhap12_13635:HG2_PB_SVrefine2PBcRplusDovetail_6475:HG3_Ill_SVrefine2DISCOVARDovetail_13160:HG3_PB_SVrefine2Falcon1Dovetail_11581:HG3_PB_SVrefine2PBcRDovetail_9127:HG4_Ill_SVrefine2DISCOVARDovetail_12970:HG4_PB_SVrefine2Falcon1Dovetail_11601:HG4_PB_SVrefine2PBcRDovetail_9384:HG4_PB_pbsv_18579;NumExactMatchSVs=13;ClusterMaxShiftDist=0.254186;ClusterMaxSizeDiff=0.254186;ClusterMaxEditDist=0.254186;PBcalls=18;Illcalls=11;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-2724;DistBack=20440;DistForward=26291;DistMin=20440;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=288;REFWIDENED=20:42271854-42274865;PctSeqSimilarity=0.9919;PctSizeSimilarity=1;PctRecOverlap=0.996;SizeDiff=0;StartDistance=-11;EndDistance=-11;GTMatch=0;TruScore=99;MatchId=2232.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:51:1/1:1:5:2:17:./.:3:32:0:0:1/1:2:31:1/1:4:160:2610:.:.
chr20	42676125	HG4_PB_SVrefine2Falcon1Dovetail_11604	TTAACATCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2898:HG2_Ill_Krunchall_24652:HG4_Ill_Krunchall_24968:HG3_Ill_Krunchall_24204:HG2_PB_pbsv_18654:HG3_PB_assemblyticsfalcon_15531:HG2_PB_assemblyticsPBcR_15155:HG4_PB_assemblyticsfalcon_15289:HG2_PB_assemblyticsfalcon_15569:HG4_PB_HySA_26929:HG2_PB_HySA_33778:HG4_PB_pbsv_18583:HG4_PB_SVrefine2PBcRDovetail_9387:HG4_PB_SVrefine2Falcon1Dovetail_11604:HG4_Ill_SVrefine2DISCOVARDovetail_12975:HG4_Ill_GATKHCSBGrefine_12570:HG4_10X_allpass_3355:HG3_PB_pbsv_18341:HG3_PB_SVrefine2PBcRDovetail_9131:HG3_PB_SVrefine2Falcon1Dovetail_11585:HG3_Ill_SVrefine2DISCOVARDovetail_13167:HG3_Ill_MetaSV_3048:HG3_Ill_GATKHCSBGrefine_12025:HG3_10X_allpass_3493:HG2_PB_SVrefine2PBcRplusDovetail_6479:HG2_PB_SVrefine2PB10Xhap12_13639:HG2_PB_SVrefine2Falcon2Bionano_9202:HG2_PB_SVrefine2Falcon1plusDovetail_6983:HG2_Ill_breakscan11_2668:HG2_Ill_SpiralSDKrefine_9851:HG2_Ill_SVrefine2DISCOVARplusDovetail_7594:HG2_Ill_MetaSV_2899:HG2_Ill_GATKHCSBGrefine_12163:HG2_10X_allpass_2852:HG2_10X_SVrefine210Xhap12_13045:HG4_Ill_Spiral_1430:HG4_Ill_MetaSV_3000:HG2_Ill_tnscope_1962;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13045:HG2_10X_allpass_2852:HG2_Ill_GATKHCSBGrefine_12163:HG2_Ill_MetaSV_2899:HG2_Ill_SVrefine2DISCOVARplusDovetail_7594:HG2_Ill_SpiralSDKrefine_9851:HG2_Ill_breakscan11_2668:HG2_PB_SVrefine2Falcon1plusDovetail_6983:HG2_PB_SVrefine2Falcon2Bionano_9202:HG2_PB_SVrefine2PB10Xhap12_13639:HG2_PB_SVrefine2PBcRplusDovetail_6479:HG3_10X_allpass_3493:HG3_Ill_GATKHCSBGrefine_12025:HG3_Ill_MetaSV_3048:HG3_Ill_SVrefine2DISCOVARDovetail_13167:HG3_PB_SVrefine2Falcon1Dovetail_11585:HG3_PB_SVrefine2PBcRDovetail_9131:HG3_PB_pbsv_18341:HG4_10X_allpass_3355:HG4_Ill_GATKHCSBGrefine_12570:HG4_Ill_SVrefine2DISCOVARDovetail_12975:HG4_PB_SVrefine2Falcon1Dovetail_11604:HG4_PB_SVrefine2PBcRDovetail_9387;NumExactMatchSVs=23;ClusterMaxShiftDist=0.0125313;ClusterMaxSizeDiff=0.0125313;ClusterMaxEditDist=0.0150565;PBcalls=17;Illcalls=17;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=18;HG3count=9;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-399;DistBack=21256;DistForward=-398;DistMin=-398;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=20:42676126-42676527;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2233.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:0:6:0:17:./.:0:29:0:0:1/1:0:54:0/1:2:11:.:.:.
chr20	43836817	HG2_Ill_SVrefine2DISCOVARplusDovetail_7600	AGAAGAAAGACGACTCCACTATGGAGAAAATGGTGTGCAGAAAGATGTATCCCAAAGCAGTATTTATAGCCAAACTGAAGAGAAAGCACAGGGCAAGTCTCAAAAACAGATAACAATTCCCAGTCAAGAGCAAGAGCATAGCCAAAAGGCAAATAAAATATCATACCAATCTTCAAGTACG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9209:HG4_PB_pbsv_18591:HG2_PB_pbsv_18662:HG4_PB_HySA_26941:HG4_Ill_MetaSV_3003:HG4_Ill_GATKHCSBGrefine_12576:HG4_Ill_250bpfermikitraw_23941:HG4_Ill_150bpfermikitraw_23042:HG4_10X_allpass_3356:HG2_Ill_SpiralSDKrefine_9854:HG2_Ill_SVrefine2DISCOVARplusDovetail_7600:HG2_Ill_GATKHCSBGrefine_12170:HG2_10X_allpass_2853:HG2_10X_SVrefine210Xhap12_13050:HG2_PB_HySA_33798:HG4_PB_SVrefine2PBcRDovetail_9392:HG4_Ill_SVrefine2DISCOVARDovetail_12982;NumClusterSVs=17;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13050:HG2_10X_allpass_2853:HG2_Ill_GATKHCSBGrefine_12170:HG2_Ill_SVrefine2DISCOVARplusDovetail_7600:HG2_Ill_SpiralSDKrefine_9854:HG4_10X_allpass_3356:HG4_Ill_150bpfermikitraw_23042:HG4_Ill_250bpfermikitraw_23941:HG4_Ill_GATKHCSBGrefine_12576;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0222222;ClusterMaxSizeDiff=0.0222222;ClusterMaxEditDist=0.0891365;PBcalls=6;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=3;CGexactcalls=0;HG2count=8;HG3count=0;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-180;DistBack=145186;DistForward=-132;DistMin=-132;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=185;REFWIDENED=20:43836736-43837100;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2234.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:29:1:0:19:1|0:0:7:45:2:0/1:31:21:./.:.:.:.:.:.
chr20	44204061	HG2_Ill_SpiralSDKrefine_9857	AGCATAAAAAATACTTAGGAGTAAATTTAACAAAGGATATGAAAGATCTGTACACTGAAAACTACAAAATATTAGTGAAAGAAATTGGAGAAGACATAAATAAATGAAAAGATATTTCATATTCATATTTCATATGGATTAGAAGAATTAATATTGTTAAAATGCCCATACCACCCAGAACCTATCTTTTTGCCCAGCTTCCCCAAATAGCAGAGGTTGCACTTTGCAGGAAACTGAGCAGCATTTTGCAATTGAAAGGTCTACAGATGGCCAGGAGCTGGGGGAGCAGTGTGAATTCCCAGGTTACAATATTTAGGAACTACAGGTAAGGGCCCACTATGACTCTATTACATCTCGCTACCCTCTAGTTCTCCCCAGTTAGGCGCTTGCCCAGCCCCAGGCCCTGTTTCCATGGCTGAGAGCTCCTAGCTCACACCCCTCCTCATCCCCATAGCATAGCATGTTCTGTTGCAAGGCTACTCAACCAGATATGTGCCTCTAGCCTCAGTTACTAGGAAGCAGACCTTGAGGAGGACAACTAGCTCCATAAGTCACTTTAATACACCTTGCCCTAAGTTCAGGCTGAGTAAGTAAGTAAATTAGTAAGCCTCGTCCAAAGATATTTTCTTCTAAATGCTGCCTAGTCAGATATCTACATTCTGATACCGGAGAAGGATTGTCTCTAAATATTGAGTACAGAACACTCCGTACATATCTCCATATTGTGCTGCTAAAATATTTTAAATCTTTTACATTTTTTGTCCTTTTGATCTGTCAATGATTGAGAAAGGTGTGTCAAGGGCCCTCAATACAGCCATAGATTTCTCAATTTATGCCTATAATGATGTCAATGTTTGCTTTAATATATCCTGATTTGATTGGTTTAGGTAAATACAAATGTATTCCTGGTGAACTGAGTCTTTTACCATTATCTAGCAAGCCATCCTTTATCCTTAAAGATAAAACTTCGTCTTAGAGTTTTCTTTTTTTTTTTCAGACAGTCTCTCACTGTCTTTCTCCCAGGGCGGAGCGCAGTGGCACGATCTTGGCTCACTCCAACCTCCCTCTCCTGGGTTCAAATGATTCTTGTGCCTCGGCCTCCCAAGGAGCTGGGATTATAGGCATGTGCCACCACACCTGTAATTTTTGTAATTTTAGTAGAGACGGGGTCTTTCCATGTTGCCTAGGCTGGTCTTGAACTCCTGGCCTCAAGCAATCTGCCTGCCTCGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCAATGTGCCCAGCCTTAGAGTTTTCTATTGCCTAATATTAATCAAACTATACTCTCTCTTCTTTGTTTGCATTTGCCTAGTCTTTTTTCCATTCTTTTGCGTTCAACCATTCTACTTATGTTTTAAGTTTATCCTTCAAATCGTGTAAATCTACATTGTAAAAATCCAGTCCAGAAATTATTACCTATTAATTGACATTTATGGGCACTAATGACATATTTGGATTCATTTCTACAATTTTATTACAAGTTATCTACTCTCAGTCCTCATTATTCAGATTCTGTACTTGCCAATTTGCCTACTTGCTGAAATTTATTTATTACCCAAAAATCAATACTCATGATGCTTTTGTGGTCATTCAGGGATATGTGCAGAATGGCAAAAAATTTGAGTCCCCCAACGTACACATTCCCAGCTGAAGTCAAACAAGGCAACGCTCTGCTTGTTTAAGCTCTTCTACTACTATAAACAAGCTTCCTTTTTGCAGTCTACTTAGTGTCACATTTTTCACATTTTTGTGCTTTTTGTTGGTGAGTTTGCTGTTTAAAATGGCTGCCAAGAATTACTAAAGTGCTGTCAAGTGTCCTAAGAGCAAGAGGCCTGCAATGTGCCTTACAAAGAAATTACTTGTGTCAGATAAGCTTGGTTCAGGCATGAGTTACAGGGCTTTCAGCCACAATTCAATGTTAATGAAACAATAATATATATTACATAAGGTGTCTTTTTTTTTTTTTGAGATGGAGTCTCACTCTGTCGCCAGGCTAGAGTACAGTAGTGCGATCTCGGCTCGCTGCAACCTCCGCCTTCTGGGTTCAAGTGATTCTCCTGCCTCAGACTCCCGAGTAGCTGGGATTACAGGCACCCACCACCACGTCCTGCTAATTTTTTGTATTTTTAGTAGAGATGAGGTTTCACTGTGTTGGCCAGGATGGTCTCAATCTCCTGACCTAGTGATCCGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGGCCTATATACATGTTTAAAAAATAAAGACAGGGCCAGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAGATCACCTGTGGTCAGGAGTTCAAGACTAGCCTGGCCAACACGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCTGGAGTGGTGGTGCACACCTGTAGTCCCAGCTACTCAGGAGGCTAAGGCAGGAGGATCCCTTGAACCCAGAAGGTGGAGGTTGCAGAGAGCCGAGATCACACCACTATGCTCCAGCCTGGGGGACAGAGAGAGATTCCCTCTCAAACAAAACAAAAAAAATAAAAATAAAAATAAATAAATAAATAAAGTATGTAGAGTTTTATTTAATAATTAACCACACAGATTAAAAAATAGAAAGTAGCCAGCTTCCCAGAAGTCTTCTGTGTGCACCTTCTAATTACCATCTCTGTCATGTGTCTTCAGACAGAAGCACATATAAAAACAAGGTTATGTATTGATCAAATGATGAAAATGTGTGGTCAGAGGCTTGCATTTTCCCTAGGAGCAATGGCTCAGTATTTGCTAATCCGGTGTTCACAGTGACTTTACAGAACATAACTACCCCCAAGTAATGGGAATCAACTGTATTTTTATTACTTTGGTGTACAAAGAACTTTGAGCTCTCCATGGCTTGCCACAACAAAAGACTTCCTAGGCAAATTGTCTACTGCTTTGTTCCAAGTGGGGGCTCTACTTGAGGCTGTGGGACCAAGACAAAAGAAGCAGCCTCTATGTGGATTAGGCCCCTTCTCCTGGCAGAGAGAAAGCACAAAGGAGCTGGCAGAAACTCACAGTGCAAAACTCACTATGCATATGCTACATCTGCTCATACTCCAATAGGCAAAGCACAGCTGACAGCAAACCCAAAGTCAATGAGACAGAAATGTGTCTTCCTTCCACGGGCCGTTCTAAAATT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13051:HG4_10X_allpass_3357:HG2_10X_allpass_2854:HG4_Ill_Krunchall_24976:HG2_Ill_Krunchall_24660:HG3_PB_assemblyticsfalcon_15544:HG2_PB_assemblyticsPBcR_15167:HG4_PB_assemblyticsfalcon_15304:HG2_Ill_tnscope_1963:HG4_PB_pbsv_18592:HG4_PB_SVrefine2PBcRDovetail_9393:HG4_Ill_MetaSV_3004:HG3_PB_SVrefine2Falcon1Dovetail_11591:HG2_PB_assemblyticsfalcon_15579:HG2_PB_SVrefine2PBcRplusDovetail_6485:HG2_PB_SVrefine2Falcon1plusDovetail_6991:HG2_Ill_SpiralSDKrefine_9857:HG2_Ill_MetaSV_2901:HG4_PB_SVrefine2Falcon1Dovetail_11612:HG2_PB_pbsv_18663:HG2_PB_SVrefine2PB10Xhap12_13648:HG2_PB_SVrefine2Falcon1plusDovetail_6990:HG2_Ill_SVrefine2DISCOVARplusDovetail_7602;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_MetaSV_2901:HG2_Ill_SpiralSDKrefine_9857:HG2_PB_SVrefine2Falcon1plusDovetail_6991:HG2_PB_SVrefine2PBcRplusDovetail_6485:HG2_PB_assemblyticsfalcon_15579:HG3_PB_SVrefine2Falcon1Dovetail_11591:HG4_Ill_MetaSV_3004:HG4_PB_SVrefine2PBcRDovetail_9393:HG4_PB_pbsv_18592;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00464037;ClusterMaxSizeDiff=0.00464037;ClusterMaxEditDist=0.00464037;PBcalls=13;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-3238;DistBack=9876;DistForward=-3238;DistMin=-3238;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=20:44204058-44207302;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2235.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:69:49:./.:15:16:41:15:1|0:0:27:46:0:0/1:58:16:0/1:296:122:3225:.:.
chr20	44359412	HG4_Ill_manta_4195	CTCACTGCAACCTCCGCTTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCCGGGATTACAGGCACGTGCCACCACACCCAGCTAATTTTTCTATTTTTAGTA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_18597:HG2_PB_HySA_33802:HG4_PB_SVrefine2PBcRDovetail_9396:HG4_Ill_manta_4195:HG4_Ill_MetaSV_3006:HG4_Ill_GATKHC_29218:HG4_Ill_GATKHCSBGrefine_12580:HG4_CG_vcfBeta_11538:HG3_Ill_GATKHCSBGrefine_12033:HG3_CG_vcfBeta_9935:HG2_PB_assemblyticsfalcon_15584:HG2_PB_SVrefine2PBcRplusDovetail_6488:HG2_PB_SVrefine2PB10Xhap12_13651:HG2_PB_SVrefine2Falcon1plusDovetail_6994:HG2_Ill_scalpel_17262:HG2_Ill_SVrefine2DISCOVARplusDovetail_7606:HG2_Ill_MetaSV_2902:HG2_Ill_GATKHC_29246:HG2_Ill_GATKHCSBGrefine_12175:HG2_PB_pbsv_18666:HG2_PB_assemblyticsPBcR_15170:HG3_PB_pbsv_18352;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12175:HG2_Ill_GATKHC_29246:HG2_Ill_MetaSV_2902:HG2_Ill_SVrefine2DISCOVARplusDovetail_7606:HG2_Ill_scalpel_17262:HG2_PB_SVrefine2Falcon1plusDovetail_6994:HG2_PB_SVrefine2PB10Xhap12_13651:HG2_PB_SVrefine2PBcRplusDovetail_6488:HG2_PB_assemblyticsfalcon_15584:HG3_CG_vcfBeta_9935:HG3_Ill_GATKHCSBGrefine_12033:HG4_CG_vcfBeta_11538:HG4_Ill_GATKHCSBGrefine_12580:HG4_Ill_GATKHC_29218:HG4_Ill_MetaSV_3006:HG4_Ill_manta_4195:HG4_PB_SVrefine2PBcRDovetail_9396;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0176991;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.0442478;PBcalls=10;Illcalls=10;TenXcalls=0;CGcalls=2;PBexactcalls=5;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=2;HG2count=12;HG3count=3;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-112;DistBack=2342;DistForward=7972;DistMin=2342;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=20:44359413-44359524;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2236.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:41:./.:18:25:23:14:0|1:41:1:0:27:0/1:22:11:./.:.:.:.:.:.
chr20	44402438	HG2_10X_SVrefine210Xhap12_13052	GTTCCACCCTCAACCCACATTCTCCAATAAAAGAAAGAAGGTCAGCAGGTCTAAAAGAGACTGACCTCCACCCCCACCAGGGCTTGAGAAAGACATCTATGGCAAGTCACTCTCAGTTTAGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13052:HG4_Ill_GATKHCSBGrefine_12583:HG3_Ill_GATKHCSBGrefine_12036:HG2_Ill_GATKHCSBGrefine_12178:HG2_PB_assemblyticsfalcon_15588:HG2_PB_SVrefine2Falcon1plusDovetail_6996:HG2_PB_pbsv_18668:HG3_PB_pbsv_18354:HG4_PB_pbsv_18599:HG3_PB_HySA_27878:HG4_PB_HySA_26943:HG4_Ill_SVrefine2DISCOVARDovetail_12985:HG3_PB_SVrefine2PBcRDovetail_9138:HG2_PB_SVrefine2PB10Xhap12_13653:HG2_PB_HySA_33804;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13052:HG4_PB_HySA_26943:HG4_Ill_SVrefine2DISCOVARDovetail_12985:HG3_PB_SVrefine2PBcRDovetail_9138:HG2_PB_SVrefine2PB10Xhap12_13653:HG2_PB_HySA_33804;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0337553;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0590717;PBcalls=10;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-121;DistBack=13388;DistForward=-121;DistMin=-121;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=129;REFWIDENED=20:44402439-44402688;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2237.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:21:0|1:23:4:3:14:./.:7:0:0:4:0/1:19:11:./.:.:.:.:.:.
chr20	44535257	HG2_PB_SVrefine2PB10Xhap12_13655	GGTGGCTCACACCTGTAATCCCAGCACTTAGGGAGGTCAAGGCGGGCGGATCACCTGAGGTCAGGTGTTCGAGACCAGCCTGGTCCACCACGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGTTGGGCATGGTGGTGGGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGATCCTGGGAGGTGGAGGTTGCAGGGAGCCAGGATTGCACCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGATGGCATGAGGTTCCTTTCCCTTGGTTTCTCCTACCTCCTCCTTCGCTTCCCATGCCTGTGTGTTAGGTGTGATGGGAAAATACCTTTGCCCCACAGTAGACAGAGGTCATGGCTTAGAAAAAGGGAATTCATGGCCAGGCACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13054:HG4_10X_allpass_3358:HG3_10X_allpass_3494:HG3_PB_HySA_27879:HG3_PB_pbsv_18355:HG4_PB_pbsv_18601:HG2_PB_pbsv_18670:HG2_Ill_breakscan11_2669:HG2_PB_HySA_33807:HG2_Ill_tnscope_1964:HG4_Ill_GATKHCSBGrefine_12585:HG3_Ill_GATKHCSBGrefine_12037:HG2_Ill_manta_4932:HG2_Ill_SpiralSDKrefine_9863:HG2_Ill_GATKHCSBGrefine_12180:HG2_10X_allpass_2855:HG4_PB_HySA_26944:HG3_Ill_MetaSV_3052:HG4_Ill_MetaSV_3008:HG4_PB_SVrefine2PBcRDovetail_9397:HG4_PB_SVrefine2Falcon1Dovetail_11616:HG4_Ill_SVrefine2DISCOVARDovetail_12986:HG3_PB_SVrefine2PBcRDovetail_9139:HG3_PB_SVrefine2Falcon1Dovetail_11596:HG3_Ill_SVrefine2DISCOVARDovetail_13178:HG2_PB_SVrefine2PBcRplusDovetail_6491:HG2_PB_SVrefine2PB10Xhap12_13655:HG2_PB_SVrefine2Falcon2Bionano_9214:HG2_PB_SVrefine2Falcon1plusDovetail_6998:HG2_Ill_SVrefine2DISCOVARplusDovetail_7607;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13054:HG4_PB_SVrefine2PBcRDovetail_9397:HG4_PB_SVrefine2Falcon1Dovetail_11616:HG4_Ill_SVrefine2DISCOVARDovetail_12986:HG3_PB_SVrefine2PBcRDovetail_9139:HG3_PB_SVrefine2Falcon1Dovetail_11596:HG3_Ill_SVrefine2DISCOVARDovetail_13178:HG2_PB_SVrefine2PBcRplusDovetail_6491:HG2_PB_SVrefine2PB10Xhap12_13655:HG2_PB_SVrefine2Falcon2Bionano_9214:HG2_PB_SVrefine2Falcon1plusDovetail_6998:HG2_Ill_SVrefine2DISCOVARplusDovetail_7607;NumExactMatchSVs=12;ClusterMaxShiftDist=0.381818;ClusterMaxSizeDiff=0.381818;ClusterMaxEditDist=0.381818;PBcalls=14;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-439;DistBack=-527;DistForward=-176;DistMin=-527;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=261;REFWIDENED=20:44535258-44535957;PctSeqSimilarity=0.905;PctSizeSimilarity=0.9932;PctRecOverlap=0.7955;SizeDiff=3;StartDistance=-90;EndDistance=-87;GTMatch=0;TruScore=89;MatchId=2238.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:4:50:./.:3:6:1:4:./.:11:5:7:4:0/0:25:1:0/1:19:4:.:.:.
chr20	47487213	HG3_PB_SVrefine2Falcon1Dovetail_11615	AGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAAGCAGGCAGGTCACTTGAGGTCAGGAATTCGAGACCTACCTGGGTAACATGGCAAAACCCTGTCTCTACTATGAAAAATACAAAAATTAGCTGGGTGCAGTGGCAGGTGCCTGTAATCCCAGCTACTCAAGAGACTGAAGCATGATAATCACTTGAACCCGGGAGGCAGAGGTTGCAACAAGATGAGATTGTGGCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACCATATTTACTTCTGTTCTTTTATCCAAGTGCTTGAGGAAGCTTAGGATTCAGACAGACTTGGAGCGTCAGTCCTGGCTCAACCTCCTGCAAGCTGTATGATTTTGGGTAATTTACTTGTCCCTCCTAAGCTTCAGTTTTCTTAACTATAATATGGAGATAATAATAGTCTATATTGTGAATTGTGCTTGGTAATCACACCAGACACAAAATATATACCTTTAAACATTAGAGTCAGGTCCAGCTCACCAAAATACTCAGGCTATGAAAGGCTGACAAGATTCAGGGCACCTCGGCCGGGCGTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13063:HG3_PB_HySA_27901:HG2_PB_pbsv_18684:HG4_PB_pbsv_18620:HG4_Ill_MetaSV_3010:HG3_Ill_MetaSV_3055:HG3_PB_pbsv_18373:HG4_PB_pbsv_18619:HG2_PB_HySA_33843:HG4_PB_HySA_26972:HG4_PB_SVrefine2PBcRDovetail_9410:HG4_PB_SVrefine2Falcon1Dovetail_11629:HG4_Ill_SVrefine2DISCOVARDovetail_12999:HG3_PB_SVrefine2PBcRDovetail_9148:HG3_PB_SVrefine2Falcon1Dovetail_11615:HG3_Ill_SVrefine2DISCOVARDovetail_13184:HG2_PB_SVrefine2PBcRplusDovetail_6503:HG2_PB_SVrefine2PB10Xhap12_13670:HG2_PB_SVrefine2Falcon2Bionano_9225:HG2_PB_SVrefine2Falcon1plusDovetail_7013:HG2_Ill_SVrefine2DISCOVARplusDovetail_7613;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13063:HG4_PB_SVrefine2PBcRDovetail_9410:HG4_PB_SVrefine2Falcon1Dovetail_11629:HG4_Ill_SVrefine2DISCOVARDovetail_12999:HG3_PB_SVrefine2PBcRDovetail_9148:HG3_PB_SVrefine2Falcon1Dovetail_11615:HG3_Ill_SVrefine2DISCOVARDovetail_13184:HG2_PB_SVrefine2PBcRplusDovetail_6503:HG2_PB_SVrefine2PB10Xhap12_13670:HG2_PB_SVrefine2Falcon2Bionano_9225:HG2_PB_SVrefine2Falcon1plusDovetail_7013:HG2_Ill_SVrefine2DISCOVARplusDovetail_7613;NumExactMatchSVs=12;ClusterMaxShiftDist=0.00988468;ClusterMaxSizeDiff=0.00988468;ClusterMaxEditDist=0.00993378;PBcalls=15;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-606;DistBack=2965;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=893;REFWIDENED=20:47487214-47488712;PctSeqSimilarity=0.9946;PctSizeSimilarity=0.9967;PctRecOverlap=0.5468;SizeDiff=-2;StartDistance=-274;EndDistance=-276;GTMatch=1;TruScore=84;MatchId=2239.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:54:1/1:0:21:0:24:0/0:7:0:7:0:0/0:12:0:0/1:5:9:.:.:.
chr20	47724665	HG4_PB_HySA_26973	CAAAAAAAAAAAAAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGACCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13065:HG2_10X_allpass_2856:HG4_10X_allpass_3360:HG4_PB_assemblyticsfalcon_15346:HG4_PB_SVrefine2Falcon1Dovetail_11631:HG2_PB_assemblyticsfalcon_15623:HG2_PB_SVrefine2Falcon1plusDovetail_7015:HG2_PB_SVrefine2Falcon2Bionano_9227:HG2_Ill_SVrefine2DISCOVARplusDovetail_7615:HG3_PB_SVrefine2Falcon1Dovetail_11618:HG3_PB_assemblyticsfalcon_15586:HG2_PB_assemblyticsPBcR_15204:HG2_PB_SVrefine2PB10Xhap12_13672:HG2_PB_PB10Xdip_18416:HG4_PB_SVrefine2PBcRDovetail_9412:HG4_PB_HySA_26973:HG2_Ill_tnscope_1965:HG2_Ill_MetaSV_2909:HG4_Ill_GATKHCSBGrefine_12596:HG2_Ill_GATKHCSBGrefine_12189:HG2_PB_SVrefine2PBcRplusDovetail_6505:HG4_PB_pbsv_18622:HG2_PB_pbsv_18686;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_MetaSV_2909:HG2_Ill_tnscope_1965:HG4_PB_HySA_26973:HG4_PB_SVrefine2PBcRDovetail_9412;NumExactMatchSVs=4;ClusterMaxShiftDist=0.273973;ClusterMaxSizeDiff=0.273973;ClusterMaxEditDist=0.273973;PBcalls=15;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-326;DistBack=-419;DistForward=23;DistMin=-419;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=20:47724666-47725004;PctSeqSimilarity=0.9985;PctSizeSimilarity=0.9969;PctRecOverlap=0.9969;SizeDiff=1;StartDistance=0;EndDistance=1;GTMatch=0;TruScore=99;MatchId=2240.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:26:0|1:27:0:2:24:./.:0:12:26:3:./.:3:4:0/1:20:7:.:.:0.88413
chr20	48450944	HG2_Ill_svaba_22834	ATATATATATACTGTATATATATACTGTATATATATATATATACTGTATATATATATACTGTG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_18688:HG3_Ill_svaba_23063:HG3_Ill_scalpel_17626:HG3_Ill_manta_4030:HG3_Ill_GATKHC_29198:HG3_Ill_GATKHCSBGrefine_12046:HG3_Ill_250bpfermikitraw_23659:HG3_Ill_150bpfermikitraw_22979:HG2_Ill_svaba_22834:HG2_Ill_scalpel_17287:HG2_Ill_manta_4936:HG2_Ill_Krunchall_24694:HG2_Ill_GATKHC_29287:HG2_Ill_GATKHCSBGrefine_12192:HG2_Ill_250bpfermikitraw_24356:HG2_Ill_150bpfermikitraw_22939:HG2_Ill_SpiralSDKrefine_9885:HG3_PB_pbsv_18376;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22939:HG2_Ill_250bpfermikitraw_24356:HG2_Ill_GATKHCSBGrefine_12192:HG2_Ill_GATKHC_29287:HG2_Ill_Krunchall_24694:HG2_Ill_manta_4936:HG2_Ill_scalpel_17287:HG2_Ill_svaba_22834:HG3_Ill_150bpfermikitraw_22979:HG3_Ill_250bpfermikitraw_23659:HG3_Ill_GATKHCSBGrefine_12046:HG3_Ill_GATKHC_29198:HG3_Ill_manta_4030:HG3_Ill_scalpel_17626:HG3_Ill_svaba_23063;NumExactMatchSVs=15;ClusterMaxShiftDist=0.255034;ClusterMaxSizeDiff=0.255034;ClusterMaxEditDist=0.268456;PBcalls=2;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=47603;DistForward=49751;DistMin=47603;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=20:48450943-48451017;PctSeqSimilarity=0.9005;PctSizeSimilarity=0.7654;PctRecOverlap=0.3293;SizeDiff=-19;StartDistance=55;EndDistance=36;GTMatch=0;TruScore=66;MatchId=2241.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:22:0|1:35:1:1:18:./.:30:3:6:10:0/1:37:19:./.:.:.:.:.:.
chr20	48543735	HG2_PB_assemblyticsfalcon_15632	CAAAGGTTGCAGTGAGCCGAGATGGTACCACTGCACTCCAGCCTGGGAACAAAGTGAGACTCCATCTCAAAAAAAAAAATA	C	20	PASS	ClusterIDs=HG2_PB_pbsv_18689:HG2_PB_assemblyticsPBcR_15212:HG3_PB_assemblyticsfalcon_15594:HG4_PB_pbsv_18623:HG4_PB_HySA_26979:HG3_Ill_Spiral_18824:HG4_PB_assemblyticsfalcon_15354:HG4_PB_SVrefine2PBcRDovetail_9414:HG4_Ill_svaba_22795:HG4_Ill_scalpel_16890:HG4_Ill_manta_4198:HG4_Ill_SVrefine2DISCOVARDovetail_13006:HG4_Ill_Krunchall_25020:HG4_Ill_GATKHC_29266:HG4_Ill_GATKHCSBGrefine_12598:HG4_Ill_250bpfermikitraw_23987:HG4_Ill_150bpfermikitraw_23083:HG4_CG_vcfBeta_11563:HG4_10X_allpass_3361:HG3_Ill_svaba_23064:HG3_Ill_manta_4031:HG3_Ill_MetaSV_3057:HG3_Ill_Krunchall_24247:HG3_Ill_GATKHC_29200:HG3_Ill_GATKHCSBGrefine_12047:HG3_Ill_250bpfermikitraw_23661:HG3_Ill_150bpfermikitraw_22981:HG3_10X_allpass_3497:HG2_PB_assemblyticsfalcon_15632:HG2_PB_SVrefine2PB10Xhap12_13677:HG2_PB_SVrefine2Falcon2Bionano_9229:HG2_Ill_svaba_22836:HG2_Ill_scalpel_17288:HG2_Ill_breakscan11_2671:HG2_Ill_Krunchall_24696:HG2_Ill_GATKHC_29289:HG2_Ill_GATKHCSBGrefine_12193:HG2_Ill_250bpfermikitraw_24358:HG2_Ill_150bpfermikitraw_22941:HG3_PB_pbsv_18377:HG2_PB_HySA_33851;NumClusterSVs=41;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22941:HG2_Ill_250bpfermikitraw_24358:HG2_Ill_GATKHCSBGrefine_12193:HG2_Ill_GATKHC_29289:HG2_Ill_Krunchall_24696:HG2_Ill_breakscan11_2671:HG2_Ill_scalpel_17288:HG2_Ill_svaba_22836:HG2_PB_SVrefine2Falcon2Bionano_9229:HG2_PB_SVrefine2PB10Xhap12_13677:HG2_PB_assemblyticsfalcon_15632:HG3_10X_allpass_3497:HG3_Ill_150bpfermikitraw_22981:HG3_Ill_250bpfermikitraw_23661:HG3_Ill_GATKHCSBGrefine_12047:HG3_Ill_GATKHC_29200:HG3_Ill_Krunchall_24247:HG3_Ill_MetaSV_3057:HG3_Ill_manta_4031:HG3_Ill_svaba_23064:HG4_10X_allpass_3361:HG4_CG_vcfBeta_11563:HG4_Ill_150bpfermikitraw_23083:HG4_Ill_250bpfermikitraw_23987:HG4_Ill_GATKHCSBGrefine_12598:HG4_Ill_GATKHC_29266:HG4_Ill_Krunchall_25020:HG4_Ill_SVrefine2DISCOVARDovetail_13006:HG4_Ill_manta_4198:HG4_Ill_scalpel_16890:HG4_Ill_svaba_22795:HG4_PB_SVrefine2PBcRDovetail_9414:HG4_PB_assemblyticsfalcon_15354;NumExactMatchSVs=33;ClusterMaxShiftDist=0.05;ClusterMaxSizeDiff=0.05;ClusterMaxEditDist=0.0503145;PBcalls=12;Illcalls=26;TenXcalls=2;CGcalls=1;PBexactcalls=5;Illexactcalls=25;TenXexactcalls=2;CGexactcalls=1;HG2count=14;HG3count=12;HG4count=15;NumTechs=4;NumTechsExact=4;SVLEN=-80;DistBack=23250;DistForward=24702;DistMin=23250;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=20:48543736-48543817;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:36:0|1:33:2:3:33:1|0:0:31:22:0:0/1:42:20:./.:.:.:.:.:.
chr20	48772774	HG2_10X_SVrefine210Xhap12_13070	TGACTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_18628:HG4_PB_SVrefine2Falcon1Dovetail_11635:HG2_PB_SVrefine2Falcon1plusDovetail_7020:HG2_PB_HySA_33857:HG4_PB_HySA_26984:HG3_Ill_MetaSV_3058:HG2_Ill_tnscope_1966:HG2_Ill_MetaSV_2910:HG4_PB_SVrefine2PBcRDovetail_9418:HG4_Ill_manta_4199:HG4_Ill_SVrefine2DISCOVARDovetail_13008:HG4_Ill_GATKHCSBGrefine_12600:HG4_10X_allpass_3362:HG3_PB_SVrefine2PBcRDovetail_9154:HG3_PB_SVrefine2Falcon1Dovetail_11623:HG3_PB_HySA_27911:HG3_Ill_manta_4032:HG3_Ill_SVrefine2DISCOVARDovetail_13193:HG3_Ill_GATKHCSBGrefine_12048:HG3_10X_allpass_3498:HG2_PB_pbsv_18693:HG2_PB_SVrefine2PBcRplusDovetail_6510:HG2_PB_SVrefine2PB10Xhap12_13680:HG2_PB_SVrefine2Falcon2Bionano_9232:HG2_Ill_manta_4937:HG2_Ill_SpiralSDKrefine_9888:HG2_Ill_SVrefine2DISCOVARplusDovetail_7623:HG2_Ill_GATKHCSBGrefine_12194:HG2_10X_SVrefine210Xhap12_13070:HG3_PB_pbsv_18380;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13070:HG2_Ill_GATKHCSBGrefine_12194:HG2_Ill_SVrefine2DISCOVARplusDovetail_7623:HG2_Ill_SpiralSDKrefine_9888:HG2_Ill_manta_4937:HG2_PB_SVrefine2Falcon2Bionano_9232:HG2_PB_SVrefine2PB10Xhap12_13680:HG2_PB_SVrefine2PBcRplusDovetail_6510:HG2_PB_pbsv_18693:HG3_10X_allpass_3498:HG3_Ill_GATKHCSBGrefine_12048:HG3_Ill_SVrefine2DISCOVARDovetail_13193:HG3_Ill_manta_4032:HG3_PB_HySA_27911:HG3_PB_SVrefine2Falcon1Dovetail_11623:HG3_PB_SVrefine2PBcRDovetail_9154:HG4_10X_allpass_3362:HG4_Ill_GATKHCSBGrefine_12600:HG4_Ill_SVrefine2DISCOVARDovetail_13008:HG4_Ill_manta_4199:HG4_PB_SVrefine2PBcRDovetail_9418;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0416;ClusterMaxSizeDiff=0.0416;ClusterMaxEditDist=0.0416667;PBcalls=14;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-318;DistForward=-118;DistMin=-318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=591;REFWIDENED=20:48772775-48773682;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2243.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:35:1/1:0:8:0:20:./.:1:10:1:15:1/1:0:20:./.:2:6:.:.:.
chr20	50783964	HG3_Ill_svaba_23082	ACTACTTTGTTAACTACATTTATAGTCTGGGACTTAGGCATGTTTCCTCCCTCCCTTCCTCCCTCCCTT	A	20	PASS	ClusterIDs=HG2_PB_pbsv_18710:HG2_PB_HySA_33883:HG2_PB_assemblyticsfalcon_15662:HG2_PB_assemblyticsPBcR_15244:HG3_PB_HySA_27937:HG2_PB_HySA_33882:HG4_Ill_svaba_22818:HG4_Ill_Krunchall_25053:HG4_Ill_GATKHC_29307:HG4_Ill_GATKHCSBGrefine_12614:HG4_Ill_250bpfermikitraw_24020:HG4_Ill_150bpfermikitraw_23109:HG4_10X_allpass_3364:HG3_Ill_svaba_23082:HG3_Ill_scalpel_17648:HG3_Ill_Krunchall_24275:HG3_Ill_GATKHC_29231:HG3_Ill_GATKHCSBGrefine_12059:HG3_Ill_250bpfermikitraw_23692:HG3_Ill_150bpfermikitraw_23006:HG2_PB_SVrefine2PBcRplusDovetail_6523:HG2_PB_SVrefine2PB10Xhap12_13693:HG2_PB_SVrefine2Falcon2Bionano_9242:HG2_PB_SVrefine2Falcon1plusDovetail_7031:HG2_Ill_svaba_22858:HG2_Ill_scalpel_17311:HG2_Ill_manta_4939:HG2_Ill_SVrefine2DISCOVARplusDovetail_7637:HG2_Ill_Krunchall_24732:HG2_Ill_GATKHC_29328:HG2_Ill_GATKHCSBGrefine_12208:HG2_Ill_250bpfermikitraw_24389:HG2_Ill_150bpfermikitraw_22967:HG2_10X_allpass_2858:HG2_10X_SVrefine210Xhap12_13078:HG4_PB_pbsv_18646:HG2_Ill_breakscan11_2672:HG3_PB_pbsv_18396;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13078:HG2_10X_allpass_2858:HG2_Ill_150bpfermikitraw_22967:HG2_Ill_250bpfermikitraw_24389:HG2_Ill_GATKHCSBGrefine_12208:HG2_Ill_GATKHC_29328:HG2_Ill_Krunchall_24732:HG2_Ill_SVrefine2DISCOVARplusDovetail_7637:HG2_Ill_manta_4939:HG2_Ill_scalpel_17311:HG2_Ill_svaba_22858:HG2_PB_SVrefine2Falcon1plusDovetail_7031:HG2_PB_SVrefine2Falcon2Bionano_9242:HG2_PB_SVrefine2PB10Xhap12_13693:HG2_PB_SVrefine2PBcRplusDovetail_6523:HG3_Ill_150bpfermikitraw_23006:HG3_Ill_250bpfermikitraw_23692:HG3_Ill_GATKHCSBGrefine_12059:HG3_Ill_GATKHC_29231:HG3_Ill_Krunchall_24275:HG3_Ill_scalpel_17648:HG3_Ill_svaba_23082:HG4_10X_allpass_3364:HG4_Ill_150bpfermikitraw_23109:HG4_Ill_250bpfermikitraw_24020:HG4_Ill_GATKHCSBGrefine_12614:HG4_Ill_GATKHC_29307:HG4_Ill_Krunchall_25053:HG4_Ill_svaba_22818;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0434783;ClusterMaxSizeDiff=0.0434783;ClusterMaxEditDist=0.131387;PBcalls=12;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=4;Illexactcalls=22;TenXexactcalls=3;CGexactcalls=0;HG2count=21;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-68;DistBack=-35;DistForward=37074;DistMin=-35;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=20:50783965-50784034;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2245.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:77:./.:3:25:1:2:1/1:0:16:0:11:1/1:0:44:./.:.:.:.:.:.
chr20	51845112	HG2_Ill_250bpfermikitraw_24406	GCCTCTGCCCATTGGATGCCAGTGGCACCACCTCCCGAGTTGAGACAACCAAAATTGT	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24406:HG2_PB_pbsv_18716:HG4_PB_pbsv_18651:HG4_PB_SVrefine2PBcRDovetail_9428:HG4_Ill_SVrefine2DISCOVARDovetail_13024:HG2_PB_SVrefine2PBcRplusDovetail_6526;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24406:HG4_PB_SVrefine2PBcRDovetail_9428:HG4_Ill_SVrefine2DISCOVARDovetail_13024:HG2_PB_SVrefine2PBcRplusDovetail_6526;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0357143;ClusterMaxSizeDiff=0.0350877;ClusterMaxEditDist=0.0714286;PBcalls=4;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-57;DistBack=2;DistForward=58;DistMin=2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=172;REFWIDENED=20:51845113-51845341;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2246.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:25:0|1:36:3:1:20:./.:0:1:0:1:0/1:10:12:./.:.:.:.:.:.
chr20	53292651	HG3_Ill_GATKHCSBGrefine_12071	TTGATTCCTAATTTCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2919:HG4_PB_assemblyticsfalcon_15401:HG3_PB_assemblyticsfalcon_15643:HG2_PB_assemblyticsPBcR_15274:HG4_PB_HySA_27030:HG3_PB_HySA_27958:HG4_Ill_Krunchall_25076:HG3_Ill_Krunchall_24301:HG2_Ill_Krunchall_24769:HG2_PB_pbsv_18723:HG3_PB_pbsv_18409:HG2_PB_PB10Xdip_18457:HG2_Ill_breakscan11_2674:HG2_PB_SVrefine2PB10Xhap12_13703:HG4_PB_pbsv_18665:HG4_PB_SVrefine2PBcRDovetail_9436:HG4_PB_SVrefine2Falcon1Dovetail_11654:HG4_Ill_scalpel_16929:HG4_Ill_SVrefine2DISCOVARDovetail_13033:HG4_Ill_GATKHCSBGrefine_12626:HG4_10X_allpass_3368:HG3_PB_SVrefine2PBcRDovetail_9165:HG3_PB_SVrefine2Falcon1Dovetail_11640:HG3_Ill_scalpel_17670:HG3_Ill_manta_4037:HG3_Ill_SVrefine2DISCOVARDovetail_13220:HG3_Ill_GATKHCSBGrefine_12071:HG3_10X_allpass_3500:HG2_PB_assemblyticsfalcon_15689:HG2_PB_SVrefine2PBcRplusDovetail_6530:HG2_PB_SVrefine2PB10Xhap12_13702:HG2_PB_SVrefine2Falcon2Bionano_9248:HG2_PB_SVrefine2Falcon1plusDovetail_7041:HG2_PB_HySA_33911:HG2_Ill_scalpel_17331:HG2_Ill_manta_4945:HG2_Ill_SpiralSDKrefine_9920:HG2_Ill_GATKHCSBGrefine_12220:HG2_10X_allpass_2860:HG2_10X_SVrefine210Xhap12_13093:HG4_Ill_Spiral_1433:HG4_Ill_MetaSV_3022:HG3_Ill_Spiral_18864:HG3_Ill_MetaSV_3064:HG2_Ill_Spiral_1201;NumClusterSVs=45;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13093:HG2_10X_allpass_2860:HG2_Ill_GATKHCSBGrefine_12220:HG2_Ill_SpiralSDKrefine_9920:HG2_Ill_manta_4945:HG2_Ill_scalpel_17331:HG2_PB_HySA_33911:HG2_PB_SVrefine2Falcon1plusDovetail_7041:HG2_PB_SVrefine2Falcon2Bionano_9248:HG2_PB_SVrefine2PB10Xhap12_13702:HG2_PB_SVrefine2PBcRplusDovetail_6530:HG2_PB_assemblyticsfalcon_15689:HG3_10X_allpass_3500:HG3_Ill_GATKHCSBGrefine_12071:HG3_Ill_SVrefine2DISCOVARDovetail_13220:HG3_Ill_manta_4037:HG3_Ill_scalpel_17670:HG3_PB_SVrefine2Falcon1Dovetail_11640:HG3_PB_SVrefine2PBcRDovetail_9165:HG4_10X_allpass_3368:HG4_Ill_GATKHCSBGrefine_12626:HG4_Ill_SVrefine2DISCOVARDovetail_13033:HG4_Ill_scalpel_16929:HG4_PB_SVrefine2Falcon1Dovetail_11654:HG4_PB_SVrefine2PBcRDovetail_9436:HG4_PB_pbsv_18665;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0875203;ClusterMaxSizeDiff=0.0875203;ClusterMaxEditDist=0.0875203;PBcalls=20;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=11;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=30660;DistForward=14373;DistMin=14373;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:53292652-53292979;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2247.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:44:0|1:16:0:0:43:0|1:40:0:0:13:0/1:26:15:0/1:37:9:.:.:.
chr20	53963833	HG4_Ill_250bpfermikitraw_24043	GTCCAGTCATACGGAGTGTCGTACTCTTCTTTGAGTTCTGTCCAGTCATACGGAGTGTCGTACTCTTCTTTGAGTTCTC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13095:HG3_PB_HySA_27964:HG2_PB_HySA_33918:HG4_Ill_svaba_22840:HG4_Ill_manta_4211:HG4_Ill_Krunchall_25077:HG4_Ill_GATKHC_29338:HG4_Ill_GATKHCSBGrefine_12630:HG4_Ill_250bpfermikitraw_24043:HG4_Ill_150bpfermikitraw_23134:HG3_Ill_svaba_23115:HG3_Ill_manta_4039:HG3_Ill_Krunchall_24303:HG3_Ill_GATKHC_29267:HG3_Ill_GATKHCSBGrefine_12075:HG3_Ill_250bpfermikitraw_23721:HG3_Ill_150bpfermikitraw_23037:HG2_Ill_svaba_22889:HG2_Ill_manta_4947:HG2_Ill_Krunchall_24771:HG2_Ill_GATKHC_29366:HG2_Ill_GATKHCSBGrefine_12224:HG2_Ill_250bpfermikitraw_24418:HG2_Ill_150bpfermikitraw_22998:HG4_PB_pbsv_18669:HG2_PB_pbsv_18728:HG3_PB_pbsv_18412:HG4_PB_SVrefine2PBcRDovetail_9438:HG4_PB_SVrefine2Falcon1Dovetail_11657:HG4_Ill_SVrefine2DISCOVARDovetail_13035:HG3_PB_SVrefine2PBcRDovetail_9167:HG3_PB_SVrefine2Falcon1Dovetail_11643:HG3_Ill_SVrefine2DISCOVARDovetail_13223:HG2_PB_SVrefine2PBcRplusDovetail_6532:HG2_PB_SVrefine2PB10Xhap12_13705:HG2_PB_SVrefine2Falcon2Bionano_9251:HG2_PB_SVrefine2Falcon1plusDovetail_7044:HG2_Ill_SVrefine2DISCOVARplusDovetail_7650;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_22998:HG2_Ill_250bpfermikitraw_24418:HG2_Ill_GATKHCSBGrefine_12224:HG2_Ill_GATKHC_29366:HG2_Ill_Krunchall_24771:HG2_Ill_manta_4947:HG2_Ill_svaba_22889:HG3_Ill_150bpfermikitraw_23037:HG3_Ill_250bpfermikitraw_23721:HG3_Ill_GATKHCSBGrefine_12075:HG3_Ill_GATKHC_29267:HG3_Ill_Krunchall_24303:HG3_Ill_manta_4039:HG3_Ill_svaba_23115:HG4_Ill_150bpfermikitraw_23134:HG4_Ill_250bpfermikitraw_24043:HG4_Ill_GATKHCSBGrefine_12630:HG4_Ill_GATKHC_29338:HG4_Ill_Krunchall_25077:HG4_Ill_manta_4211:HG4_Ill_svaba_22840;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.0379747;PBcalls=13;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=21;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=11;NumTechs=3;NumTechsExact=1;SVLEN=-78;DistBack=52087;DistForward=-44;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=92;REFWIDENED=20:53963791-53963960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2248.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:60:1/1:1:27:2:17:./.:0:4:0:12:1/1:0:43:./.:.:.:.:.:.
chr20	54114163	HG3_Ill_MetaSV_3066	TTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCGCCACCGTGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_pbsv_18670:HG2_10X_allpass_2861:HG3_10X_allpass_3501:HG3_PB_HySA_27967:HG2_PB_HySA_33921:HG4_PB_SVrefine2PBcRDovetail_9439:HG4_PB_SVrefine2Falcon1Dovetail_11658:HG4_Ill_SVrefine2DISCOVARDovetail_13036:HG4_Ill_GATKHCSBGrefine_12631:HG3_PB_SVrefine2PBcRDovetail_9168:HG3_PB_SVrefine2Falcon1Dovetail_11644:HG3_Ill_SVrefine2DISCOVARDovetail_13225:HG3_Ill_MetaSV_3066:HG3_Ill_GATKHCSBGrefine_12076:HG2_PB_pbsv_18729:HG2_PB_SVrefine2PBcRplusDovetail_6533:HG2_PB_SVrefine2PB10Xhap12_13706:HG2_PB_SVrefine2Falcon2Bionano_9252:HG2_PB_SVrefine2Falcon1plusDovetail_7045:HG2_Ill_SVrefine2DISCOVARplusDovetail_7651:HG2_Ill_GATKHCSBGrefine_12225:HG2_10X_SVrefine210Xhap12_13097:HG2_Ill_MetaSV_2922:HG3_PB_pbsv_18413;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13097:HG2_Ill_GATKHCSBGrefine_12225:HG2_Ill_SVrefine2DISCOVARplusDovetail_7651:HG2_PB_SVrefine2Falcon1plusDovetail_7045:HG2_PB_SVrefine2Falcon2Bionano_9252:HG2_PB_SVrefine2PB10Xhap12_13706:HG2_PB_SVrefine2PBcRplusDovetail_6533:HG2_PB_pbsv_18729:HG3_Ill_GATKHCSBGrefine_12076:HG3_Ill_MetaSV_3066:HG3_Ill_SVrefine2DISCOVARDovetail_13225:HG3_PB_SVrefine2Falcon1Dovetail_11644:HG3_PB_SVrefine2PBcRDovetail_9168:HG4_Ill_GATKHCSBGrefine_12631:HG4_Ill_SVrefine2DISCOVARDovetail_13036:HG4_PB_SVrefine2Falcon1Dovetail_11658:HG4_PB_SVrefine2PBcRDovetail_9439;NumExactMatchSVs=17;ClusterMaxShiftDist=0.057508;ClusterMaxSizeDiff=0.057508;ClusterMaxEditDist=0.0641026;PBcalls=13;Illcalls=8;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-320;DistBack=13052;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=20:54114164-54114492;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2249.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:63:1/1:1:34:0:23:./.:0:5:0:5:0/1:8:36:1/1:1:23:.:.:.
chr20	54203255	HG4_PB_SVrefine2Falcon1Dovetail_11661	TTATGTATACATATATGTATATATTATATATTATGTATACATATATGTATATATGTATGTATACATGTATATACATATATACGTATACACATATATACGTGTATATACA	CG	20	PASS	ClusterIDs=HG2_PB_pbsv_18732:HG2_PB_HySA_33931:HG2_PB_SVrefine2PB10Xhap12_13708:HG4_PB_assemblyticsfalcon_15410:HG4_PB_SVrefine2Falcon1Dovetail_11661:HG2_Ill_manta_4951:HG4_Ill_250bpfermikitraw_24047:HG2_Ill_250bpfermikitraw_24426;NumClusterSVs=8;ExactMatchIDs=HG4_PB_SVrefine2Falcon1Dovetail_11661:HG4_PB_assemblyticsfalcon_15410;NumExactMatchSVs=2;ClusterMaxShiftDist=0.358974;ClusterMaxSizeDiff=0.358974;ClusterMaxEditDist=0.358974;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-107;DistBack=-10;DistForward=-86;DistMin=-86;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=20:54203254-54203364;PctSeqSimilarity=0.8717;PctSizeSimilarity=0.785;PctRecOverlap=0.5046;SizeDiff=23;StartDistance=30;EndDistance=54;GTMatch=0;TruScore=72;MatchId=2250.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:58:./.:18:33:4:17:./.:22:3:10:6:0/1:31:12:./.:.:.:.:.:.
chr20	54208632	HG3_PB_SVrefine2PBcRDovetail_9171	TCAGCAGGGAGAAGCCCTGCAGTGGGAGAGGGCACTTCCTAGCTCATTGGTGCCCAAAGTCCAGAGGAGGCCAAGGTGGCAGGGGCTGGTTTATCAGCACTGCCCCAAGCTTGTGCATACCTGGCCCCAAGACTAGAGCAGGTGCCAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13099:HG3_Ill_Krunchall_24309:HG2_Ill_Krunchall_24780:HG3_PB_pbsv_18417:HG2_PB_pbsv_18733:HG3_PB_SVrefine2PBcRDovetail_9171:HG3_Ill_svaba_23119:HG3_Ill_scalpel_17674:HG3_Ill_SVrefine2DISCOVARDovetail_13226:HG3_Ill_GATKHC_29274:HG3_Ill_GATKHCSBGrefine_12079:HG2_Ill_svaba_22897:HG2_Ill_scalpel_17333:HG2_Ill_manta_4952:HG2_Ill_breakscan11_2675:HG2_Ill_SpiralSDKrefine_9928:HG2_Ill_SVrefine2DISCOVARplusDovetail_7654:HG2_Ill_GATKHC_29373:HG2_Ill_GATKHCSBGrefine_12227;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13099:HG3_PB_SVrefine2PBcRDovetail_9171:HG3_Ill_svaba_23119:HG3_Ill_scalpel_17674:HG3_Ill_SVrefine2DISCOVARDovetail_13226:HG3_Ill_GATKHC_29274:HG3_Ill_GATKHCSBGrefine_12079:HG2_Ill_svaba_22897:HG2_Ill_scalpel_17333:HG2_Ill_manta_4952:HG2_Ill_breakscan11_2675:HG2_Ill_SpiralSDKrefine_9928:HG2_Ill_SVrefine2DISCOVARplusDovetail_7654:HG2_Ill_GATKHC_29373:HG2_Ill_GATKHCSBGrefine_12227;NumExactMatchSVs=15;ClusterMaxShiftDist=0.00680272;ClusterMaxSizeDiff=0.00677966;ClusterMaxEditDist=0.0136054;PBcalls=3;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=13;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-147;DistBack=5322;DistForward=-96;DistMin=-96;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=59;REFWIDENED=20:54208611-54208816;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2251.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:30:0|1:47:2:2:27:0|1:34:1:0:11:0/1:38:20:./.:.:.:.:.:.
chr20	54213954	HG2_Ill_manta_4953	AGCTGGGATTACAAGTGCACACCACCACACCCAGCTAATTTTTATATTTTTAGTAGAGACAGCATTTCACCATGTTGGCCAGCATGTTCTCGATCTCCTGACCTTGTGATTCACCTGCTTCGGCCTCCCAAAGT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13100:HG3_PB_HySA_27975:HG3_Ill_Krunchall_24310:HG3_PB_pbsv_18418:HG3_PB_SVrefine2PBcRDovetail_9172:HG3_Ill_svaba_23120:HG3_Ill_MetaSV_3067:HG3_Ill_GATKHCSBGrefine_12080:HG3_10X_allpass_3502:HG2_PB_pbsv_18734:HG2_Ill_svaba_22898:HG2_Ill_scalpel_17334:HG2_Ill_manta_4953:HG2_Ill_SVrefine2DISCOVARplusDovetail_7655:HG2_Ill_MetaSV_2924:HG2_Ill_GATKHCSBGrefine_12228;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13100:HG3_PB_SVrefine2PBcRDovetail_9172:HG3_Ill_svaba_23120:HG3_Ill_MetaSV_3067:HG3_Ill_GATKHCSBGrefine_12080:HG3_10X_allpass_3502:HG2_PB_pbsv_18734:HG2_Ill_svaba_22898:HG2_Ill_scalpel_17334:HG2_Ill_manta_4953:HG2_Ill_SVrefine2DISCOVARplusDovetail_7655:HG2_Ill_MetaSV_2924:HG2_Ill_GATKHCSBGrefine_12228;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0380228;ClusterMaxSizeDiff=0.0380228;ClusterMaxEditDist=0.0610687;PBcalls=4;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-133;DistBack=10;DistForward=-109;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=33;REFWIDENED=20:54213934-54214099;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2252.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:38:0|1:35:9:6:26:0|1:37:0:0:19:0/1:43:30:./.:.:.:.:.:.
chr20	54434610	HG2_PB_SVrefine2Falcon1plusDovetail_7049	TAATAAATTTGTGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACACAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGAAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCCCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACACCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGCCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAACCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACACCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATATTTTATAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAGGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACGAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTAAAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTTAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGTGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATAGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATTCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACATTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCCTCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACATATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACACGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAAACAAAAAAAAAAAATAAATA	T	20	PASS	ClusterIDs=HG4_PB_pbsv_18677:HG3_10X_allpass_3503:HG2_10X_allpass_2862:HG4_Ill_Krunchall_25085:HG3_Ill_Krunchall_24312:HG2_Ill_Krunchall_24783:HG4_PB_assemblyticsfalcon_15411:HG2_PB_assemblyticsPBcR_15285:HG2_PB_assemblyticsfalcon_15702:HG2_Ill_tnscope_1967:HG4_PB_SVrefine2PBcRDovetail_9443:HG4_PB_SVrefine2Falcon1Dovetail_11662:HG4_Ill_SVrefine2DISCOVARDovetail_13041:HG4_Ill_MetaSV_3026:HG4_Ill_GATKHCSBGrefine_12636:HG3_PB_pbsv_18420:HG3_PB_assemblyticsfalcon_15652:HG3_PB_SVrefine2PBcRDovetail_9174:HG3_Ill_SVrefine2DISCOVARDovetail_13229:HG3_Ill_MetaSV_3068:HG3_Ill_GATKHCSBGrefine_12081:HG2_PB_pbsv_18736:HG2_PB_SVrefine2PBcRplusDovetail_6537:HG2_PB_SVrefine2PB10Xhap12_13711:HG2_PB_SVrefine2Falcon2Bionano_9257:HG2_PB_SVrefine2Falcon1plusDovetail_7049:HG2_Ill_breakscan11_2676:HG2_Ill_SVrefine2DISCOVARplusDovetail_7657:HG2_Ill_MetaSV_2925:HG2_Ill_GATKHCSBGrefine_12231:HG2_10X_SVrefine210Xhap12_13101;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13101:HG2_Ill_GATKHCSBGrefine_12231:HG2_Ill_MetaSV_2925:HG2_Ill_SVrefine2DISCOVARplusDovetail_7657:HG2_Ill_breakscan11_2676:HG2_PB_SVrefine2Falcon1plusDovetail_7049:HG2_PB_SVrefine2Falcon2Bionano_9257:HG2_PB_SVrefine2PB10Xhap12_13711:HG2_PB_SVrefine2PBcRplusDovetail_6537:HG2_PB_pbsv_18736:HG3_Ill_GATKHCSBGrefine_12081:HG3_Ill_MetaSV_3068:HG3_Ill_SVrefine2DISCOVARDovetail_13229:HG3_PB_SVrefine2PBcRDovetail_9174:HG3_PB_assemblyticsfalcon_15652:HG3_PB_pbsv_18420:HG4_Ill_GATKHCSBGrefine_12636:HG4_Ill_MetaSV_3026:HG4_Ill_SVrefine2DISCOVARDovetail_13041:HG4_PB_SVrefine2Falcon1Dovetail_11662:HG4_PB_SVrefine2PBcRDovetail_9443;NumExactMatchSVs=21;ClusterMaxShiftDist=0.00416563;ClusterMaxSizeDiff=0.00416563;ClusterMaxEditDist=0.00416563;PBcalls=14;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-6006;DistBack=27865;DistForward=-5990;DistMin=-5990;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=20:54434611-54440629;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2253.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:115:./.:0:2:0:0:1/1:0:16:0:27:1/1:0:33:1/1:0:395:6308:.:.
chr20	54463220	HG2_PB_SVrefine2PB10Xhap12_13712	GTGGGCATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2677:HG2_PB_assemblyticsfalcon_15703:HG4_PB_HySA_27040:HG4_PB_assemblyticsfalcon_15412:HG3_PB_assemblyticsfalcon_15653:HG2_PB_assemblyticsPBcR_15286:HG3_Ill_Krunchall_24313:HG2_Ill_Krunchall_24784:HG3_PB_HySA_27978:HG3_Ill_Spiral_18875:HG2_PB_HySA_33934:HG2_Ill_Spiral_1202:HG4_PB_pbsv_18678:HG3_PB_pbsv_18421:HG4_Ill_MetaSV_3027:HG3_Ill_MetaSV_3069:HG2_Ill_tnscope_1968:HG4_PB_SVrefine2PBcRDovetail_9444:HG4_PB_SVrefine2Falcon1Dovetail_11663:HG4_Ill_scalpel_16932:HG4_Ill_manta_4215:HG4_Ill_GATKHCSBGrefine_12637:HG4_10X_allpass_3370:HG3_PB_SVrefine2PBcRDovetail_9175:HG3_Ill_scalpel_17675:HG3_Ill_manta_4042:HG3_Ill_SVrefine2DISCOVARDovetail_13230:HG3_Ill_GATKHCSBGrefine_12082:HG3_10X_allpass_3504:HG2_PB_pbsv_18737:HG2_PB_SVrefine2PBcRplusDovetail_6538:HG2_PB_SVrefine2PB10Xhap12_13712:HG2_PB_SVrefine2Falcon2Bionano_9258:HG2_PB_SVrefine2Falcon1plusDovetail_7050:HG2_Ill_scalpel_17335:HG2_Ill_manta_4955:HG2_Ill_SVrefine2DISCOVARplusDovetail_7658:HG2_Ill_MetaSV_2926:HG2_Ill_GATKHCSBGrefine_12232:HG2_10X_allpass_2863:HG2_10X_SVrefine210Xhap12_13102;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13102:HG2_10X_allpass_2863:HG2_Ill_GATKHCSBGrefine_12232:HG2_Ill_MetaSV_2926:HG2_Ill_SVrefine2DISCOVARplusDovetail_7658:HG2_Ill_manta_4955:HG2_Ill_scalpel_17335:HG2_PB_SVrefine2Falcon1plusDovetail_7050:HG2_PB_SVrefine2Falcon2Bionano_9258:HG2_PB_SVrefine2PB10Xhap12_13712:HG2_PB_SVrefine2PBcRplusDovetail_6538:HG2_PB_pbsv_18737:HG3_10X_allpass_3504:HG3_Ill_GATKHCSBGrefine_12082:HG3_Ill_SVrefine2DISCOVARDovetail_13230:HG3_Ill_manta_4042:HG3_Ill_scalpel_17675:HG3_PB_SVrefine2PBcRDovetail_9175:HG4_10X_allpass_3370:HG4_Ill_GATKHCSBGrefine_12637:HG4_Ill_manta_4215:HG4_Ill_scalpel_16932:HG4_PB_SVrefine2Falcon1Dovetail_11663:HG4_PB_SVrefine2PBcRDovetail_9444;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0900322;ClusterMaxSizeDiff=0.0900322;ClusterMaxEditDist=0.0900322;PBcalls=17;Illcalls=20;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=12;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=17673;DistForward=27530;DistMin=17673;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:54463221-54463551;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2254.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:75:1/1:0:32:2:23:1/1:0:20:0:28:1/1:0:46:./.:2:14:.:.:.
chr20	54940961	HG4_Ill_GATKHC_29355	AAGTGCTAGGATTACAGGCGTGAGCCACTGCACCTGGCCACTAAGACTTTTATTCATTCAGCTACTTCATTACATTTTTTAAAATACTGTAAATCTTAT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_18427:HG2_PB_SVrefine2PBcRplusDovetail_6544:HG2_PB_assemblyticsPBcR_15300:HG4_PB_pbsv_18683:HG4_PB_SVrefine2PBcRDovetail_9447:HG4_Ill_scalpel_16935:HG4_Ill_manta_4218:HG4_Ill_SVrefine2DISCOVARDovetail_13044:HG4_Ill_Krunchall_25092:HG4_Ill_GATKHC_29355:HG4_Ill_GATKHCSBGrefine_12640:HG4_Ill_250bpfermikitraw_24057:HG4_Ill_150bpfermikitraw_23148:HG4_CG_vcfBeta_11596:HG4_10X_allpass_3371:HG3_PB_SVrefine2PBcRDovetail_9180:HG3_Ill_SVrefine2DISCOVARDovetail_13238:HG3_Ill_Krunchall_24318:HG3_Ill_GATKHC_29284:HG3_Ill_GATKHCSBGrefine_12085:HG3_Ill_250bpfermikitraw_23738:HG2_PB_pbsv_18745:HG2_PB_SVrefine2PB10Xhap12_13717:HG2_PB_SVrefine2Falcon2Bionano_9261:HG2_Ill_SVrefine2DISCOVARplusDovetail_7662:HG2_Ill_Krunchall_24790:HG2_Ill_GATKHC_29387:HG2_Ill_GATKHCSBGrefine_12234:HG2_Ill_250bpfermikitraw_24436:HG2_Ill_150bpfermikitraw_23015:HG2_CG_vcfBeta_10548:HG2_10X_SVrefine210Xhap12_13108:HG2_Ill_Spiral_1203:HG3_PB_HySA_27982:HG2_PB_PB10Xdip_18468;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13108:HG2_CG_vcfBeta_10548:HG2_Ill_150bpfermikitraw_23015:HG2_Ill_250bpfermikitraw_24436:HG2_Ill_GATKHCSBGrefine_12234:HG2_Ill_GATKHC_29387:HG2_Ill_Krunchall_24790:HG2_Ill_SVrefine2DISCOVARplusDovetail_7662:HG2_PB_SVrefine2Falcon2Bionano_9261:HG2_PB_SVrefine2PB10Xhap12_13717:HG2_PB_pbsv_18745:HG3_Ill_250bpfermikitraw_23738:HG3_Ill_GATKHCSBGrefine_12085:HG3_Ill_GATKHC_29284:HG3_Ill_Krunchall_24318:HG3_Ill_SVrefine2DISCOVARDovetail_13238:HG3_PB_SVrefine2PBcRDovetail_9180:HG4_10X_allpass_3371:HG4_CG_vcfBeta_11596:HG4_Ill_150bpfermikitraw_23148:HG4_Ill_250bpfermikitraw_24057:HG4_Ill_GATKHCSBGrefine_12640:HG4_Ill_GATKHC_29355:HG4_Ill_Krunchall_25092:HG4_Ill_SVrefine2DISCOVARDovetail_13044:HG4_Ill_manta_4218:HG4_Ill_scalpel_16935:HG4_PB_SVrefine2PBcRDovetail_9447:HG4_PB_pbsv_18683;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0942408;ClusterMaxSizeDiff=0.0942408;ClusterMaxEditDist=0.0947368;PBcalls=11;Illcalls=20;TenXcalls=2;CGcalls=2;PBexactcalls=6;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=2;HG2count=15;HG3count=8;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-98;DistBack=37567;DistForward=22089;DistMin=22089;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=20:54940962-54941061;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2255.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:23:0|1:22:4:3:17:1|0:0:21:34:0:0/1:32:19:./.:.:.:.:.:.
chr20	55606894	HG4_Ill_150bpfermikitraw_23152	GGTGTGTGTGTATGTGTGTGTGTGTGTGTATGTGTGTGTATGTGTGTGTGGTGTGTGTGGTGTGTGTATGTGTGTGGTGTGTGTGGTGTGTGTGTATGTGTATGTATGTGTGTGTATGCATGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13111:HG4_PB_assemblyticsfalcon_15428:HG4_PB_SVrefine2Falcon1Dovetail_11671:HG4_Ill_svaba_22860:HG4_Ill_GATKHC_29359:HG4_Ill_150bpfermikitraw_23152:HG3_Ill_svaba_23133:HG3_Ill_scalpel_17683:HG3_Ill_GATKHC_29287:HG3_Ill_GATKHCSBGrefine_12088:HG3_Ill_150bpfermikitraw_23052:HG2_Ill_svaba_22912:HG2_Ill_scalpel_17343:HG2_Ill_manta_4960:HG2_Ill_SpiralSDKrefine_9938:HG2_Ill_GATKHC_29390:HG2_Ill_GATKHCSBGrefine_12236:HG2_Ill_150bpfermikitraw_23019:HG2_Ill_MetaSV_2928:HG4_PB_pbsv_18687:HG2_PB_HySA_33951:HG3_PB_pbsv_18433:HG2_PB_pbsv_18749:HG4_PB_SVrefine2PBcRDovetail_9450:HG4_Ill_SVrefine2DISCOVARDovetail_13051:HG3_PB_SVrefine2PBcRDovetail_9182:HG3_PB_SVrefine2Falcon1Dovetail_11654:HG3_Ill_SVrefine2DISCOVARDovetail_13245:HG2_PB_SVrefine2PBcRplusDovetail_6547:HG2_PB_SVrefine2PB10Xhap12_13720:HG2_PB_SVrefine2Falcon2Bionano_9264:HG2_PB_SVrefine2Falcon1plusDovetail_7057:HG2_Ill_SVrefine2DISCOVARplusDovetail_7665;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23019:HG2_Ill_GATKHCSBGrefine_12236:HG2_Ill_GATKHC_29390:HG2_Ill_SpiralSDKrefine_9938:HG2_Ill_manta_4960:HG2_Ill_scalpel_17343:HG2_Ill_svaba_22912:HG3_Ill_150bpfermikitraw_23052:HG3_Ill_GATKHCSBGrefine_12088:HG3_Ill_GATKHC_29287:HG3_Ill_scalpel_17683:HG3_Ill_svaba_23133:HG4_Ill_150bpfermikitraw_23152:HG4_Ill_GATKHC_29359:HG4_Ill_svaba_22860;NumExactMatchSVs=15;ClusterMaxShiftDist=0.192;ClusterMaxSizeDiff=0.192;ClusterMaxEditDist=0.192;PBcalls=13;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=1;SVLEN=-122;DistBack=19983;DistForward=-26;DistMin=-26;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=274;REFWIDENED=20:55606869-55607264;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2256.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:52:./.:0:4:4:35:./.:15:39:0:27:1/1:0:16:./.:.:.:.:.:.
chr20	56173516	HG3_Ill_GATKHC_29291	CTGGGTTTGAATCCTATCTCTGTCCTTGGGCAGTAGTTTCACCTCCCTGAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13116:HG3_PB_assemblyticsfalcon_15671:HG4_PB_HySA_27056:HG4_Ill_svaba_22865:HG3_Ill_svaba_23140:HG2_Ill_svaba_22918:HG4_Ill_svaba_22864:HG4_Ill_scalpel_16937:HG4_Ill_Krunchall_25101:HG4_Ill_GATKHC_29364:HG4_Ill_GATKHCSBGrefine_12644:HG4_Ill_Cortex_2116:HG4_Ill_250bpfermikitraw_24067:HG4_Ill_150bpfermikitraw_23159:HG3_Ill_svaba_23139:HG3_Ill_scalpel_17685:HG3_Ill_Krunchall_24325:HG3_Ill_GATKHC_29291:HG3_Ill_GATKHCSBGrefine_12089:HG3_Ill_Cortex_2154:HG3_Ill_250bpfermikitraw_23747:HG3_Ill_150bpfermikitraw_23056:HG2_Ill_svaba_22917:HG2_Ill_scalpel_17345:HG2_Ill_SpiralSDKrefine_9942:HG2_Ill_SVrefine2DISCOVARplusDovetail_7668:HG2_Ill_Krunchall_24795:HG2_Ill_GATKHC_29395:HG2_Ill_GATKHCSBGrefine_12238:HG2_Ill_Cortex_4961:HG2_Ill_250bpfermikitraw_24443:HG2_Ill_150bpfermikitraw_23024;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13116:HG4_Ill_svaba_22864:HG4_Ill_scalpel_16937:HG4_Ill_Krunchall_25101:HG4_Ill_GATKHC_29364:HG4_Ill_GATKHCSBGrefine_12644:HG4_Ill_Cortex_2116:HG4_Ill_250bpfermikitraw_24067:HG4_Ill_150bpfermikitraw_23159:HG3_Ill_svaba_23139:HG3_Ill_scalpel_17685:HG3_Ill_Krunchall_24325:HG3_Ill_GATKHC_29291:HG3_Ill_GATKHCSBGrefine_12089:HG3_Ill_Cortex_2154:HG3_Ill_250bpfermikitraw_23747:HG3_Ill_150bpfermikitraw_23056:HG2_Ill_svaba_22917:HG2_Ill_scalpel_17345:HG2_Ill_SpiralSDKrefine_9942:HG2_Ill_SVrefine2DISCOVARplusDovetail_7668:HG2_Ill_Krunchall_24795:HG2_Ill_GATKHC_29395:HG2_Ill_GATKHCSBGrefine_12238:HG2_Ill_Cortex_4961:HG2_Ill_250bpfermikitraw_24443:HG2_Ill_150bpfermikitraw_23024;NumExactMatchSVs=27;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0392157;PBcalls=2;Illcalls=29;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=26;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=60383;DistForward=-46;DistMin=-46;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=54;REFWIDENED=20:56173517-56173620;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2257.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:27:./.:12:19:16:5:0|1:11:0:0:14:0/1:33:28:./.:.:.:.:.:.
chr20	59804673	HG3_10X_allpass_3508	GATATATATATATATATATATATATATATATATATATATATATATATATAT	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_1204:HG2_PB_HySA_34020:HG4_PB_assemblyticsfalcon_15486:HG4_Ill_FB_15573:HG3_Ill_FB_15673:HG4_Ill_SVrefine2DISCOVARDovetail_13073:HG4_Ill_Krunchall_25130:HG4_Ill_GATKHC_29413:HG4_Ill_GATKHCSBGrefine_12664:HG4_Ill_250bpfermikitraw_24101:HG4_Ill_150bpfermikitraw_23189:HG3_Ill_Krunchall_24353:HG3_Ill_GATKHC_29332:HG3_Ill_GATKHCSBGrefine_12103:HG3_Ill_250bpfermikitraw_23778:HG3_Ill_150bpfermikitraw_23083:HG3_10X_allpass_3508:HG2_PB_SVrefine2Falcon1plusDovetail_7076:HG2_Ill_SVrefine2DISCOVARplusDovetail_7686:HG2_Ill_Krunchall_24825:HG2_Ill_GATKHC_29441:HG2_Ill_GATKHCSBGrefine_12254:HG2_Ill_250bpfermikitraw_24472:HG2_Ill_150bpfermikitraw_23057:HG2_10X_SVrefine210Xhap12_13146:HG2_Ill_breakscan11_2680:HG3_PB_assemblyticsfalcon_15714:HG2_PB_SVrefine2PBcRplusDovetail_6567:HG2_PB_SVrefine2PB10Xhap12_13745:HG4_PB_SVrefine2PBcRDovetail_9472:HG3_PB_SVrefine2PBcRDovetail_9204:HG3_Ill_SVrefine2DISCOVARDovetail_13265:HG2_PB_SVrefine2Falcon2Bionano_9290:HG2_Ill_FB_15723:HG4_Ill_Spiral_1434:HG3_Ill_Spiral_18911;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13146:HG2_Ill_150bpfermikitraw_23057:HG2_Ill_250bpfermikitraw_24472:HG2_Ill_GATKHCSBGrefine_12254:HG2_Ill_GATKHC_29441:HG2_Ill_Krunchall_24825:HG2_Ill_SVrefine2DISCOVARplusDovetail_7686:HG2_PB_SVrefine2Falcon1plusDovetail_7076:HG3_10X_allpass_3508:HG3_Ill_150bpfermikitraw_23083:HG3_Ill_250bpfermikitraw_23778:HG3_Ill_GATKHCSBGrefine_12103:HG3_Ill_GATKHC_29332:HG3_Ill_Krunchall_24353:HG4_Ill_150bpfermikitraw_23189:HG4_Ill_250bpfermikitraw_24101:HG4_Ill_GATKHCSBGrefine_12664:HG4_Ill_GATKHC_29413:HG4_Ill_Krunchall_25130:HG4_Ill_SVrefine2DISCOVARDovetail_13073;NumExactMatchSVs=20;ClusterMaxShiftDist=0.10101;ClusterMaxSizeDiff=0.10101;ClusterMaxEditDist=0.10101;PBcalls=9;Illcalls=25;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-50;DistBack=11190;DistForward=-32;DistMin=-32;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=20:59804674-59804743;PctSeqSimilarity=0.9592;PctSizeSimilarity=0.92;PctRecOverlap=0.9216;SizeDiff=4;StartDistance=0;EndDistance=4;GTMatch=0;TruScore=93;MatchId=2260.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:71:1/1:5:38:2:24:./.:0:10:5:10:1/1:1:41:./.:.:.:.:.:.
chr20	59884412	HG3_Ill_Krunchall_24357	CGAGTTTCCAGAACCATGCAGGTGTGCATAGAGGTGTTCAGCTGTCTTCCTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13148:HG4_PB_HySA_27102:HG2_PB_pbsv_18794:HG4_PB_pbsv_18731:HG2_PB_HySA_34022:HG3_PB_pbsv_18489:HG3_PB_HySA_28041:HG4_Ill_svaba_22895:HG4_Ill_scalpel_16958:HG4_Ill_manta_4222:HG4_Ill_Krunchall_25132:HG4_Ill_GATKHC_29420:HG4_Ill_GATKHCSBGrefine_12665:HG4_Ill_250bpfermikitraw_24103:HG4_Ill_150bpfermikitraw_23191:HG3_PB_assemblyticsfalcon_15717:HG3_Ill_svaba_23164:HG3_Ill_scalpel_17710:HG3_Ill_manta_4048:HG3_Ill_Krunchall_24357:HG3_Ill_GATKHC_29336:HG3_Ill_GATKHCSBGrefine_12106:HG3_Ill_250bpfermikitraw_23780:HG3_Ill_150bpfermikitraw_23085:HG2_PB_assemblyticsfalcon_15774:HG2_Ill_svaba_22953:HG2_Ill_scalpel_17369:HG2_Ill_manta_4966:HG2_Ill_SpiralSDKrefine_9964:HG2_Ill_Krunchall_24827:HG2_Ill_GATKHC_29445:HG2_Ill_GATKHCSBGrefine_12258:HG2_Ill_250bpfermikitraw_24474:HG2_Ill_150bpfermikitraw_23059:HG4_PB_assemblyticsfalcon_15489:HG4_PB_SVrefine2PBcRDovetail_9475:HG4_Ill_SVrefine2DISCOVARDovetail_13075:HG3_PB_SVrefine2PBcRDovetail_9206:HG3_Ill_SVrefine2DISCOVARDovetail_13266:HG2_PB_SVrefine2PBcRplusDovetail_6570:HG2_PB_SVrefine2PB10Xhap12_13750:HG2_PB_SVrefine2Falcon2Bionano_9292:HG2_Ill_SVrefine2DISCOVARplusDovetail_7687;NumClusterSVs=43;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23059:HG2_Ill_250bpfermikitraw_24474:HG2_Ill_GATKHCSBGrefine_12258:HG2_Ill_GATKHC_29445:HG2_Ill_Krunchall_24827:HG2_Ill_SpiralSDKrefine_9964:HG2_Ill_manta_4966:HG2_Ill_scalpel_17369:HG2_Ill_svaba_22953:HG2_PB_assemblyticsfalcon_15774:HG3_Ill_150bpfermikitraw_23085:HG3_Ill_250bpfermikitraw_23780:HG3_Ill_GATKHCSBGrefine_12106:HG3_Ill_GATKHC_29336:HG3_Ill_Krunchall_24357:HG3_Ill_manta_4048:HG3_Ill_scalpel_17710:HG3_Ill_svaba_23164:HG3_PB_assemblyticsfalcon_15717:HG4_Ill_150bpfermikitraw_23191:HG4_Ill_250bpfermikitraw_24103:HG4_Ill_GATKHCSBGrefine_12665:HG4_Ill_GATKHC_29420:HG4_Ill_Krunchall_25132:HG4_Ill_manta_4222:HG4_Ill_scalpel_16958:HG4_Ill_svaba_22895;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0588235;PBcalls=14;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=25;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-51;DistBack=13075;DistForward=-40;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=102;REFWIDENED=20:59884373-59884525;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2261.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:61:1/1:1:23:1:26:1/1:0:11:0:9:1/1:0:40:./.:.:.:.:.:.
chr20	59974166	HG3_Ill_SVrefine2DISCOVARDovetail_13268	AAAAACCCACTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_Ill_MetaSV_2934:HG2_PB_SVrefine2Falcon1plusDovetail_7088:HG3_PB_HySA_28053:HG3_Ill_Krunchall_24361:HG2_Ill_Krunchall_24831:HG2_Ill_Spiral_1205:HG3_PB_pbsv_18501:HG3_Ill_scalpel_17712:HG3_Ill_manta_4052:HG3_Ill_SVrefine2DISCOVARDovetail_13268:HG3_Ill_MetaSV_3081:HG3_Ill_GATKHCSBGrefine_12111:HG3_10X_allpass_3509:HG2_PB_pbsv_18805:HG2_PB_SVrefine2PBcRplusDovetail_6581:HG2_PB_SVrefine2PB10Xhap12_13759:HG2_Ill_scalpel_17371:HG2_Ill_manta_4970:HG2_Ill_breakscan11_2684:HG2_Ill_SpiralSDKrefine_9967:HG2_Ill_SVrefine2DISCOVARplusDovetail_7694:HG2_Ill_GATKHCSBGrefine_12260:HG2_10X_allpass_2864:HG2_10X_SVrefine210Xhap12_13153;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13153:HG2_10X_allpass_2864:HG2_Ill_GATKHCSBGrefine_12260:HG2_Ill_SVrefine2DISCOVARplusDovetail_7694:HG2_Ill_SpiralSDKrefine_9967:HG2_Ill_breakscan11_2684:HG2_Ill_manta_4970:HG2_Ill_scalpel_17371:HG2_PB_SVrefine2PB10Xhap12_13759:HG2_PB_SVrefine2PBcRplusDovetail_6581:HG2_PB_pbsv_18805:HG3_10X_allpass_3509:HG3_Ill_GATKHCSBGrefine_12111:HG3_Ill_MetaSV_3081:HG3_Ill_SVrefine2DISCOVARDovetail_13268:HG3_Ill_manta_4052:HG3_Ill_scalpel_17712;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0278638;ClusterMaxSizeDiff=0.00621118;ClusterMaxEditDist=0.13354;PBcalls=6;Illcalls=15;TenXcalls=3;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=9;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-321;DistBack=8444;DistForward=-321;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:59974167-59974501;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2262.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:24:0|1:35:0:2:19:1|0:0:20:38:0:0/1:35:16:0/1:20:8:.:.:.
chr20	60160728	HG4_Ill_250bpfermikitraw_24108	GGTGATGGTGATGGTGATGATTGTGGTCATGTGGAGGATGGTGGTGATGATGGTGATGTGGTGATGGGGAGGATGATGGTGATGAAGATGATGATGATGGTGATGGTGATT	G	20	PASS	ClusterIDs=HG2_Ill_GATKHCSBGrefine_12263:HG4_PB_SVrefine2PBcRDovetail_9486:HG4_Ill_SVrefine2DISCOVARDovetail_13082:HG2_PB_SVrefine2PBcRplusDovetail_6585:HG2_PB_SVrefine2PB10Xhap12_13763:HG2_PB_SVrefine2Falcon2Bionano_9303:HG2_10X_SVrefine210Xhap12_13161:HG2_PB_assemblyticsPBcR_15377:HG2_PB_pbsv_18811:HG4_PB_pbsv_18744:HG4_Ill_scalpel_16961:HG4_Ill_GATKHC_29425:HG4_Ill_GATKHCSBGrefine_12669:HG4_Ill_250bpfermikitraw_24108:HG4_Ill_150bpfermikitraw_23196:HG2_Ill_SpiralSDKrefine_9968:HG2_Ill_GATKHC_29450;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12263:HG4_PB_pbsv_18744:HG4_Ill_scalpel_16961:HG4_Ill_GATKHC_29425:HG4_Ill_GATKHCSBGrefine_12669:HG4_Ill_250bpfermikitraw_24108:HG4_Ill_150bpfermikitraw_23196:HG2_Ill_SpiralSDKrefine_9968:HG2_Ill_GATKHC_29450;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0269058;ClusterMaxSizeDiff=0.0179372;ClusterMaxEditDist=0.107143;PBcalls=7;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-110;DistBack=2465;DistForward=34371;DistMin=2465;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=432;REFWIDENED=20:60160689-60161230;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2263.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:32:0|1:28:0:4:31:./.:95:8:1:29:0/1:17:11:./.:.:.:.:.:.
chr20	60228740	HG3_PB_SVrefine2PBcRDovetail_9219	AGACGCTCCTCACCTCCCAGACGGGGTCGCAGCCGGGCAGAGGCGCTCCTCACATCCCAGACGGGGCGGCGGGGCAGAGGCGCTCCCCACATCCCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCCGCGCAGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13164:HG2_PB_pbsv_18814:HG4_PB_assemblyticsfalcon_15506:HG4_PB_SVrefine2PBcRDovetail_9489:HG4_PB_SVrefine2Falcon1Dovetail_11711:HG3_PB_SVrefine2PBcRDovetail_9219:HG2_PB_SVrefine2PB10Xhap12_13766:HG2_PB_SVrefine2Falcon2Bionano_9305:HG3_PB_pbsv_18509:HG2_PB_HySA_34046:HG4_PB_pbsv_18747:HG3_Ill_GATKHCSBGrefine_12119:HG2_Ill_GATKHCSBGrefine_12264:HG2_10X_SVrefine210Xhap12_13165:HG4_Ill_MetaSV_3037:HG3_PB_SVrefine2Falcon1Dovetail_11689:HG2_PB_SVrefine2PB10Xhap12_13765;NumClusterSVs=17;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9305:HG2_PB_SVrefine2PB10Xhap12_13766:HG3_PB_SVrefine2PBcRDovetail_9219:HG4_PB_SVrefine2Falcon1Dovetail_11711:HG4_PB_SVrefine2PBcRDovetail_9489;NumExactMatchSVs=5;ClusterMaxShiftDist=0.211009;ClusterMaxSizeDiff=0.211009;ClusterMaxEditDist=0.314088;PBcalls=12;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-236;DistBack=-117;DistForward=-46;DistMin=-117;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=348;REFWIDENED=20:60228510-60229093;PctSeqSimilarity=0.9106;PctSizeSimilarity=0.9873;PctRecOverlap=0.6203;SizeDiff=3;StartDistance=87;EndDistance=90;GTMatch=0;TruScore=83;MatchId=2265.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:31:./.:14:21:15:9:0/0:8:1:29:0:0/0:37:1:./.:.:.:.:.:.
chr20	60526288	HG4_Ill_manta_4231	CAAAAAACCACTCACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGGTCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	C	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_13088:HG3_PB_pbsv_18523:HG2_PB_pbsv_18833:HG4_PB_SVrefine2Falcon1Dovetail_11721:HG4_PB_assemblyticsfalcon_15522:HG4_PB_SVrefine2PBcRDovetail_9496:HG4_PB_SVrefine2Falcon1Dovetail_11720:HG4_Ill_manta_4231:HG4_Ill_MetaSV_3040:HG3_PB_SVrefine2PBcRDovetail_9228:HG3_PB_SVrefine2Falcon1Dovetail_11700:HG3_Ill_scalpel_17723:HG3_Ill_manta_4054:HG3_Ill_MetaSV_3087:HG3_10X_allpass_3512:HG2_PB_SVrefine2PBcRplusDovetail_6596:HG2_PB_SVrefine2PB10Xhap12_13777:HG2_PB_SVrefine2Falcon2Bionano_9313:HG2_PB_SVrefine2Falcon1plusDovetail_7099:HG2_Ill_MetaSV_2942:HG4_PB_pbsv_18764:HG2_Ill_breakscan11_2689;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_MetaSV_2942:HG2_PB_SVrefine2Falcon1plusDovetail_7099:HG2_PB_SVrefine2Falcon2Bionano_9313:HG2_PB_SVrefine2PB10Xhap12_13777:HG2_PB_SVrefine2PBcRplusDovetail_6596:HG3_10X_allpass_3512:HG3_Ill_MetaSV_3087:HG3_Ill_manta_4054:HG3_Ill_scalpel_17723:HG3_PB_SVrefine2Falcon1Dovetail_11700:HG3_PB_SVrefine2PBcRDovetail_9228:HG4_Ill_MetaSV_3040:HG4_Ill_manta_4231:HG4_PB_SVrefine2Falcon1Dovetail_11720:HG4_PB_SVrefine2PBcRDovetail_9496:HG4_PB_assemblyticsfalcon_15522;NumExactMatchSVs=16;ClusterMaxShiftDist=0.107246;ClusterMaxSizeDiff=0.107246;ClusterMaxEditDist=0.107246;PBcalls=13;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-305;DistBack=-306;DistForward=5763;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:60526289-60526607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2267.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:14:26:0|1:13:0:0:23:0|1:28:0:0:15:0/1:25:6:./.:12:2:2331:.:.
chr20	60545961	HG4_PB_pbsv_18765	CACCGGGCAGACGTGCATTCAACACCGGTTAGACGGGCATTCAGCTTCATCACTGCGTCACA	C	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_15802:HG4_PB_assemblyticsfalcon_15523:HG3_PB_assemblyticsfalcon_15747:HG4_PB_pbsv_18765:HG2_PB_pbsv_18834;NumClusterSVs=5;ExactMatchIDs=HG4_PB_pbsv_18765;NumExactMatchSVs=1;ClusterMaxShiftDist=0.016129;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.177419;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-61;DistBack=-160;DistForward=6066;DistMin=-160;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1042;REFWIDENED=20:60545685-60546787;PctSeqSimilarity=0.9941;PctSizeSimilarity=0.9839;PctRecOverlap=0.4603;SizeDiff=-1;StartDistance=34;EndDistance=33;GTMatch=0;TruScore=81;MatchId=2268.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:16:0|1:28:3:3:13:./.:7:0:4:0:0/0:15:0:./.:.:.:2331:.:.
chr20	60570624	HG2_Ill_GATKHCSBGrefine_12272	GAAAAAAAAATTTGAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_13780:HG2_PB_assemblyticsfalcon_15807:HG4_PB_pbsv_18772:HG4_Ill_Krunchall_25145:HG2_PB_pbsv_18839:HG2_Ill_Krunchall_24842:HG2_PB_assemblyticsPBcR_15394:HG4_PB_SVrefine2Falcon1Dovetail_11725:HG2_PB_SVrefine2Falcon1plusDovetail_7103:HG4_Ill_MetaSV_3042:HG2_Ill_tnscope_1970:HG2_Ill_MetaSV_2943:HG4_PB_SVrefine2PBcRDovetail_9499:HG4_Ill_scalpel_16968:HG4_Ill_manta_4232:HG4_Ill_GATKHCSBGrefine_12678:HG2_PB_SVrefine2PBcRplusDovetail_6599:HG2_Ill_manta_4975:HG2_Ill_GATKHCSBGrefine_12272:HG2_10X_allpass_2866:HG2_10X_SVrefine210Xhap12_13174:HG2_Ill_breakscan11_2691;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13174:HG2_10X_allpass_2866:HG2_Ill_GATKHCSBGrefine_12272:HG2_Ill_manta_4975:HG2_PB_SVrefine2PBcRplusDovetail_6599:HG4_Ill_GATKHCSBGrefine_12678:HG4_Ill_manta_4232:HG4_Ill_scalpel_16968:HG4_PB_SVrefine2PBcRDovetail_9499;NumExactMatchSVs=9;ClusterMaxShiftDist=0.163447;ClusterMaxSizeDiff=0.163447;ClusterMaxEditDist=0.16692;PBcalls=9;Illcalls=11;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=37;DistForward=-319;DistMin=-319;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=20:60570625-60570957;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2270.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:20:0|1:26:1:1:19:0|1:52:0:0:9:0/1:33:25:0/1:25:11:.:.:.
chr20	60948630	HG2_PB_SVrefine2PB10Xhap12_13787	GGCCTCGGTCACGTTCACTAGGGATCGCGGGTGTGCGCCTCGGTCACGTTCACTAGGGATCGCGGGTGTGGGCCTCGGTCACGTTCACTAGGGATCGCGGGTGTGCGCCTCGGTCACGTTCACTAGGGATCGCGGGTGTGG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7114:HG4_PB_SVrefine2Falcon1Dovetail_11735:HG4_PB_assemblyticsfalcon_15543:HG2_PB_assemblyticsPBcR_15412:HG2_PB_SVrefine2PBcRplusDovetail_6605:HG2_PB_SVrefine2PB10Xhap12_13787:HG2_PB_SVrefine2Falcon2Bionano_9320:HG4_PB_pbsv_18785:HG2_PB_pbsv_18854:HG3_PB_pbsv_18534;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9320:HG2_PB_SVrefine2PB10Xhap12_13787:HG2_PB_SVrefine2PBcRplusDovetail_6605:HG2_PB_assemblyticsPBcR_15412;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0142857;ClusterMaxSizeDiff=0.0142857;ClusterMaxEditDist=0.0496454;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-140;DistBack=104;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=274;REFWIDENED=20:60948473-60948886;PctSeqSimilarity=0.9884;PctSizeSimilarity=0.9929;PctRecOverlap=0.7376;SizeDiff=1;StartDistance=36;EndDistance=37;GTMatch=0;TruScore=90;MatchId=2272.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:37:1/1:3:10:0:6:./.:0:1:0:0:./.:0:2:./.:.:.:.:6878:.
chr20	61286661	HG3_PB_assemblyticsfalcon_15769	TGGGGGCGGCACAGGTGTTCTGTATCACAGCAGCCCCGGGAAGGACCCTCCCAGGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13185:HG3_PB_pbsv_18543:HG4_PB_pbsv_18797:HG4_PB_assemblyticsfalcon_15553:HG4_Ill_Krunchall_25157:HG4_Ill_250bpfermikitraw_24132:HG4_Ill_150bpfermikitraw_23218:HG3_PB_assemblyticsfalcon_15769:HG3_Ill_Krunchall_24379:HG3_Ill_GATKHCSBGrefine_12129:HG3_Ill_250bpfermikitraw_23808:HG3_Ill_150bpfermikitraw_23112:HG2_PB_assemblyticsfalcon_15836:HG2_Ill_Krunchall_24852:HG2_Ill_GATKHCSBGrefine_12280:HG2_Ill_250bpfermikitraw_24497:HG2_Ill_150bpfermikitraw_23081:HG2_PB_pbsv_18865:HG2_PB_HySA_34116:HG4_PB_SVrefine2PBcRDovetail_9505:HG4_Ill_SVrefine2DISCOVARDovetail_13097:HG3_PB_SVrefine2PBcRDovetail_9239:HG3_Ill_SVrefine2DISCOVARDovetail_13284:HG2_PB_SVrefine2PBcRplusDovetail_6611:HG2_PB_SVrefine2PB10Xhap12_13794:HG2_PB_SVrefine2Falcon2Bionano_9325:HG2_Ill_SVrefine2DISCOVARplusDovetail_7714;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23081:HG2_Ill_250bpfermikitraw_24497:HG2_Ill_GATKHCSBGrefine_12280:HG2_Ill_Krunchall_24852:HG2_PB_assemblyticsfalcon_15836:HG3_Ill_150bpfermikitraw_23112:HG3_Ill_250bpfermikitraw_23808:HG3_Ill_GATKHCSBGrefine_12129:HG3_Ill_Krunchall_24379:HG3_PB_assemblyticsfalcon_15769:HG4_Ill_150bpfermikitraw_23218:HG4_Ill_250bpfermikitraw_24132:HG4_Ill_Krunchall_25157:HG4_PB_assemblyticsfalcon_15553;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.0877193;PBcalls=12;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=11;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-56;DistBack=-28;DistForward=10753;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=165;REFWIDENED=20:61286532-61286752;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2273.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:74:1/1:2:23:0:21:./.:0:3:0:5:1/1:0:34:./.:.:.:.:.:.
chr20	61597365	HG2_PB_SVrefine2PBcRplusDovetail_6615	CTGGGGCTCGGGTTGGCATGGTGTGCAGGGCTGCAGTGCTCTGGCCAGTGGGTGGT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7127:HG3_PB_HySA_28126:HG4_PB_pbsv_18808:HG3_PB_pbsv_18554:HG2_PB_pbsv_18873:HG4_Ill_GATKHC_29474:HG2_Ill_SpiralSDKrefine_9993:HG4_PB_SVrefine2Falcon1Dovetail_11747:HG3_PB_SVrefine2PBcRDovetail_9247:HG3_PB_SVrefine2Falcon1Dovetail_11721:HG2_PB_SVrefine2PBcRplusDovetail_6615:HG2_PB_SVrefine2PB10Xhap12_13800:HG2_PB_SVrefine2Falcon2Bionano_9329;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7127:HG4_PB_SVrefine2Falcon1Dovetail_11747:HG3_PB_SVrefine2PBcRDovetail_9247:HG3_PB_SVrefine2Falcon1Dovetail_11721:HG2_PB_SVrefine2PBcRplusDovetail_6615:HG2_PB_SVrefine2PB10Xhap12_13800:HG2_PB_SVrefine2Falcon2Bionano_9329;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0550459;ClusterMaxSizeDiff=0.0550459;ClusterMaxEditDist=0.130841;PBcalls=11;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-55;DistBack=4626;DistForward=-56;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=322;REFWIDENED=20:61597366-61597742;PctSeqSimilarity=0.9926;PctSizeSimilarity=1;PctRecOverlap=0.6964;SizeDiff=0;StartDistance=-17;EndDistance=-17;GTMatch=0;TruScore=89;MatchId=2274.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:49:1/1:1:17:0:19:./.:2:0:1:1:./.:1:4:./.:.:.:.:.:.
chr20	61607442	HG2_Ill_scalpel_17396	CCTGTCCCCGAACCTTCCCCCAGCAGGCACAGGACTGCCTCTGGGGCCCCCGACCCACCCACACCAGCCCCACACCCACAT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13195:HG3_PB_pbsv_18555:HG3_Ill_svaba_23209:HG3_Ill_scalpel_17743:HG3_Ill_manta_4058:HG3_Ill_MetaSV_3090:HG3_Ill_GATKHC_29389:HG3_Ill_GATKHCSBGrefine_12133:HG3_Ill_250bpfermikitraw_23817:HG3_Ill_150bpfermikitraw_23120:HG3_10X_allpass_3515:HG2_PB_HySA_34134:HG2_Ill_svaba_22993:HG2_Ill_scalpel_17396:HG2_Ill_Krunchall_24859:HG2_Ill_GATKHC_29499:HG2_Ill_GATKHCSBGrefine_12282:HG2_Ill_250bpfermikitraw_24505:HG2_PB_pbsv_18874:HG3_PB_SVrefine2PBcRDovetail_9248:HG3_Ill_SVrefine2DISCOVARDovetail_13291:HG2_PB_SVrefine2PB10Xhap12_13801:HG2_PB_SVrefine2Falcon1plusDovetail_7128;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24505:HG2_Ill_GATKHCSBGrefine_12282:HG2_Ill_GATKHC_29499:HG2_Ill_Krunchall_24859:HG2_Ill_scalpel_17396:HG2_Ill_svaba_22993:HG2_PB_HySA_34134:HG3_10X_allpass_3515:HG3_Ill_150bpfermikitraw_23120:HG3_Ill_250bpfermikitraw_23817:HG3_Ill_GATKHCSBGrefine_12133:HG3_Ill_GATKHC_29389:HG3_Ill_MetaSV_3090:HG3_Ill_manta_4058:HG3_Ill_scalpel_17743:HG3_Ill_svaba_23209:HG3_PB_pbsv_18555;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0124224;ClusterMaxSizeDiff=0.0124224;ClusterMaxEditDist=0.0621118;PBcalls=6;Illcalls=15;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=12;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-80;DistBack=51;DistForward=-67;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=36;REFWIDENED=20:61607431-61607546;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2275.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:29:0|1:24:3:3:21:1|0:0:12:32:2:0/1:23:19:./.:.:.:.:.:.
chr20	61624968	HG3_Ill_GATKHC_29391	GGAGGCTGGGAGCAGGAGAGGCTGGGAGGCAGGGGAGGCTGGGAGGCAGGAGAGGCTGGGAGGCAGGA	G	20	PASS	ClusterIDs=HG3_Ill_GATKHC_29391:HG4_Ill_svaba_22935:HG3_PB_pbsv_18557:HG2_PB_pbsv_18876;NumClusterSVs=4;ExactMatchIDs=HG3_Ill_GATKHC_29391;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0294118;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0592593;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-67;DistBack=-24;DistForward=-21;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=442;REFWIDENED=20:61624652-61625160;PctSeqSimilarity=0.8947;PctSizeSimilarity=0.8072;PctRecOverlap=0.8095;SizeDiff=-16;StartDistance=16;EndDistance=0;GTMatch=0;TruScore=83;MatchId=2276.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:35:./.:20:8:2:24:0|1:11:1:0:8:./.:0:0:./.:.:.:.:.:.
chr20	61676577	HG3_Ill_250bpfermikitraw_23821	CTGCATGGCGGGAACCCTCTGTCCTATCGGAGCCTGGAGACCCCAGGTCTTTCCCTTCAGCAGCTTCCACAGAGGTGGCG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7720:HG2_PB_pbsv_18881:HG4_PB_pbsv_18816:HG2_PB_assemblyticsfalcon_15857:HG3_PB_pbsv_18561:HG2_PB_assemblyticsfalcon_15856:HG4_Ill_Krunchall_25169:HG4_Ill_GATKHC_29477:HG4_Ill_GATKHCSBGrefine_12690:HG4_Ill_250bpfermikitraw_24144:HG4_Ill_150bpfermikitraw_23230:HG3_PB_assemblyticsfalcon_15794:HG3_Ill_Krunchall_24389:HG3_Ill_GATKHCSBGrefine_12134:HG3_Ill_250bpfermikitraw_23821:HG2_Ill_SpiralSDKrefine_9999:HG2_Ill_Krunchall_24867:HG2_Ill_GATKHCSBGrefine_12283:HG2_Ill_250bpfermikitraw_24509:HG4_PB_SVrefine2Falcon1Dovetail_11752:HG4_Ill_SVrefine2DISCOVARDovetail_13106:HG2_PB_SVrefine2PBcRplusDovetail_6620:HG2_PB_SVrefine2PB10Xhap12_13808;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24509:HG2_Ill_GATKHCSBGrefine_12283:HG2_Ill_Krunchall_24867:HG2_Ill_SpiralSDKrefine_9999:HG3_Ill_250bpfermikitraw_23821:HG3_Ill_GATKHCSBGrefine_12134:HG3_Ill_Krunchall_24389:HG3_PB_assemblyticsfalcon_15794:HG4_Ill_150bpfermikitraw_23230:HG4_Ill_250bpfermikitraw_24144:HG4_Ill_GATKHCSBGrefine_12690:HG4_Ill_GATKHC_29477:HG4_Ill_Krunchall_25169;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0506329;ClusterMaxSizeDiff=0.0506329;ClusterMaxEditDist=0.101911;PBcalls=9;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-79;DistBack=1004;DistForward=-20;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=158;REFWIDENED=20:61676479-61676715;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:8:14:./.:3:7:4:3:./.:7:0:0:3:0/1:14:21:./.:.:.:.:4314:.
chr20	61724699	HG3_Ill_manta_4059	CATTTTAAAGAACATGAAAAACTTTAAAAGGACGGGTAATTGTCTAACATTTTGTTAATTCAATCAGGCTTGCAATTTAAAAATAGCTTTGCCTTTTACTGAAAAAGAAATTAATTATAATTTCTTACTGAATCCAGGGAGAGAATTCGGGACTAGGGGGTTCCCTGAGAAGGTCTTCTTACACGTTACCCTCCAATGTCCTGTGGCCAAGGGAGCTTCAACCCCCTCTTTACGAGGGTTCTGGTGGCTGGAGAACTCAGAGACGGCTCTAAAAAAATTGCAAGCTGGCCAGGCACGGTGGCTCACCCCCGTATTCCCAGCACTTTAGGAGGCTGAGGCAGGCAGATCACCTGAGGTCAGGAGTTTGAGACCATCCTGGCCAACACGGTGAATCCCCGTCTCTACTAAAAATACAAAAATTAGCTGGACGTGGTGGCGCACGCCTGTAATCCCAGCTACTCAGGGGGCTGAGGCAGGAGAATCACTTGAACTTGGGAGGTGGAGGTCGCAGTGAGCCAAGATGGTGCCATTGCACCCCAGCCTGGGCGACAGAGCAAGACTTCATCTCAAAAAAATAAAAAAATGTAAACATCGCAAGCTGCACCCAGGTGTGAATCTGGAGGGCGCCTCCTTGGAAAACTTGGCTGGTGACCGCACCCTCAGTTCAAGCTCACCGGCCGCCCTTCCCTGTGCACACACGTGAGCTCTCCAGTATGTTTGGAATATCCCAGAGCCGCTGTCTCCTGGCTGCCCGGCCTCTGTGAGCCGCACTCCAGCCTGAAGGCCAAGACGGCTGCTCTGGAGAAAGAACTTCCCCTGGTGCTGAAGTCCCGAAGGAGAGCCCCATGGGCATGGGGAGGGGAGGGTGCCTCGCCCCCAAGGCTGCGCTGCTCCGCGGC	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_24870:HG4_Ill_GATKHCSBGrefine_12691:HG3_Ill_GATKHCSBGrefine_12136:HG2_Ill_GATKHCSBGrefine_12284:HG2_10X_allpass_2868:HG4_10X_allpass_3373:HG2_Ill_tnscope_1971:HG4_Ill_manta_4234:HG3_PB_SVrefine2PBcRDovetail_9254:HG3_Ill_manta_4059:HG3_Ill_SVrefine2DISCOVARDovetail_13292:HG2_PB_SVrefine2PBcRplusDovetail_6623:HG2_PB_SVrefine2PB10Xhap12_13811:HG2_PB_SVrefine2Falcon2Bionano_9335:HG2_PB_SVrefine2Falcon1plusDovetail_7135:HG2_Ill_manta_4977:HG2_Ill_SVrefine2DISCOVARplusDovetail_7721:HG2_10X_SVrefine210Xhap12_13204:HG2_Ill_SpiralSDKrefine_10001:HG4_Ill_Spiral_1438:HG3_Ill_Spiral_18950:HG2_Ill_Spiral_1207:HG4_Ill_MetaSV_3046:HG3_Ill_MetaSV_3091:HG2_Ill_MetaSV_2947:HG4_PB_pbsv_18819:HG3_PB_pbsv_18565:HG3_10X_allpass_3516:HG2_PB_pbsv_18884:HG4_Ill_Krunchall_25171;NumClusterSVs=30;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13204:HG2_Ill_SVrefine2DISCOVARplusDovetail_7721:HG2_Ill_manta_4977:HG2_PB_SVrefine2Falcon1plusDovetail_7135:HG2_PB_SVrefine2Falcon2Bionano_9335:HG2_PB_SVrefine2PB10Xhap12_13811:HG2_PB_SVrefine2PBcRplusDovetail_6623:HG3_Ill_SVrefine2DISCOVARDovetail_13292:HG3_Ill_manta_4059:HG3_PB_SVrefine2PBcRDovetail_9254:HG4_Ill_manta_4234;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00668151;ClusterMaxSizeDiff=0.00668151;ClusterMaxEditDist=0.00668524;PBcalls=8;Illcalls=18;TenXcalls=4;CGcalls=0;PBexactcalls=5;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-898;DistBack=0;DistForward=-845;DistMin=-845;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=20:61724699-61725597;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=0.9978;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2278.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:28:0|1:22:2:0:23:1|0:0:9:35:0:0/1:61:21:0/1:58:26:.:4314:.
chr20	61851644	HG2_Ill_Cortex_4992	GGCTGACATGGAGTGGGCTGGCATGGAGTGTGTGGAGTGGGCTGACGTGGAGTGCGCTGACGAGTGTGTGGAGTGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13205:HG3_PB_pbsv_18573:HG2_PB_pbsv_18892:HG3_Ill_svaba_23225:HG3_Ill_scalpel_17748:HG3_Ill_GATKHC_29403:HG3_Ill_Cortex_2169:HG2_Ill_scalpel_17403:HG2_Ill_SpiralSDKrefine_10003:HG2_Ill_GATKHC_29511:HG2_Ill_Cortex_4992:HG4_PB_SVrefine2Falcon1Dovetail_11759:HG2_Ill_SVrefine2DISCOVARplusDovetail_7724;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_Cortex_4992:HG2_Ill_GATKHC_29511:HG2_Ill_SpiralSDKrefine_10003:HG2_Ill_scalpel_17403:HG3_Ill_Cortex_2169:HG3_Ill_GATKHC_29403:HG3_Ill_scalpel_17748:HG3_Ill_svaba_23225;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0133333;ClusterMaxSizeDiff=0.013245;ClusterMaxEditDist=0.145695;PBcalls=3;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=-75;DistBack=8311;DistForward=74;DistMin=74;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=232;REFWIDENED=20:61851563-61851869;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2279.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:31:0|1:23:2:2:26:./.:0:17:18:1:0/1:11:6:./.:.:.:.:.:.
chr20	61881911	HG2_Ill_Cortex_4994	TGCTGCCTGCATCTCGGCCTTGGGGACAGGGCTGGTGAGGCTGCTCTCTGGCAGGCAG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23091:HG4_PB_assemblyticsfalcon_15583:HG3_PB_pbsv_18579:HG2_PB_HySA_34164:HG3_Ill_svaba_23227:HG3_Ill_scalpel_17750:HG3_Ill_Krunchall_24394:HG3_Ill_GATKHC_29408:HG3_Ill_GATKHCSBGrefine_12144:HG3_Ill_Cortex_2170:HG3_Ill_250bpfermikitraw_23828:HG3_Ill_150bpfermikitraw_23127:HG2_PB_pbsv_18898:HG2_Ill_svaba_23008:HG2_Ill_manta_4980:HG2_Ill_breakscan11_2697:HG2_Ill_SpiralSDKrefine_10005:HG2_Ill_Krunchall_24876:HG2_Ill_GATKHCSBGrefine_12291:HG2_Ill_Cortex_4994:HG2_Ill_250bpfermikitraw_24515;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23091:HG3_Ill_svaba_23227:HG3_Ill_scalpel_17750:HG3_Ill_Krunchall_24394:HG3_Ill_GATKHC_29408:HG3_Ill_GATKHCSBGrefine_12144:HG3_Ill_Cortex_2170:HG3_Ill_250bpfermikitraw_23828:HG3_Ill_150bpfermikitraw_23127:HG2_PB_pbsv_18898:HG2_Ill_svaba_23008:HG2_Ill_manta_4980:HG2_Ill_breakscan11_2697:HG2_Ill_SpiralSDKrefine_10005:HG2_Ill_Krunchall_24876:HG2_Ill_GATKHCSBGrefine_12291:HG2_Ill_Cortex_4994:HG2_Ill_250bpfermikitraw_24515;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.0347826;PBcalls=4;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=9;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-57;DistBack=11276;DistForward=6845;DistMin=6845;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=20:61881912-61881975;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2280.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:24:0|1:19:0:1:23:1|0:0:10:26:0:0/1:40:18:./.:.:.:.:.:.
chr20	62023983	HG2_Ill_250bpfermikitraw_24521	CGGGCAGGTCAGCAAGGGAGGAGCCGAAGCAAGGGGCAGGTCAGCAAGGGAGGAGCCGAAGCAAG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7729:HG3_Ill_Spiral_18958:HG3_Ill_svaba_23237:HG3_Ill_manta_4062:HG3_Ill_GATKHCSBGrefine_12149:HG3_Ill_250bpfermikitraw_23833:HG2_Ill_svaba_23018:HG2_Ill_SpiralSDKrefine_10010:HG2_Ill_GATKHCSBGrefine_12296:HG2_Ill_250bpfermikitraw_24521:HG3_PB_pbsv_18590:HG2_PB_pbsv_18911:HG3_PB_SVrefine2Falcon1Dovetail_11746:HG3_Ill_SVrefine2DISCOVARDovetail_13297;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24521:HG2_Ill_GATKHCSBGrefine_12296:HG2_Ill_SpiralSDKrefine_10010:HG2_Ill_svaba_23018:HG3_Ill_250bpfermikitraw_23833:HG3_Ill_GATKHCSBGrefine_12149:HG3_Ill_manta_4062:HG3_Ill_svaba_23237;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.0461538;PBcalls=3;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=8;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-64;DistBack=9;DistForward=-47;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=96;REFWIDENED=20:62023976-62024135;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2281.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:22:0|1:30:1:2:20:./.:0:3:10:1:0/1:16:28:./.:.:.:.:.:.
chr20	62033353	HG3_Ill_GATKHCSBGrefine_12150	ATCTGCCGGGCACCCTCCATGGCAGGTCCAAGCCCTGTGAACCATCCCTCTCACACCACG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23099:HG3_PB_assemblyticsfalcon_15825:HG2_PB_pbsv_18912:HG3_PB_pbsv_18591:HG3_Ill_svaba_23239:HG3_Ill_scalpel_17754:HG3_Ill_GATKHC_29420:HG3_Ill_GATKHCSBGrefine_12150:HG3_Ill_150bpfermikitraw_23133:HG2_Ill_svaba_23020:HG2_Ill_scalpel_17408:HG2_Ill_GATKHC_29527:HG2_Ill_GATKHCSBGrefine_12297;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23099:HG3_Ill_svaba_23239:HG3_Ill_scalpel_17754:HG3_Ill_GATKHC_29420:HG3_Ill_GATKHCSBGrefine_12150:HG3_Ill_150bpfermikitraw_23133:HG2_Ill_svaba_23020:HG2_Ill_scalpel_17408:HG2_Ill_GATKHC_29527:HG2_Ill_GATKHCSBGrefine_12297;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.186441;PBcalls=3;Illcalls=10;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-59;DistBack=-95;DistForward=2294;DistMin=-95;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=39;REFWIDENED=20:62033352-62033452;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2282.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:27:0|1:23:0:4:26:./.:0:5:8:0:0/1:12:3:./.:.:.:.:.:.
chr20	62184911	HG2_Ill_150bpfermikitraw_23104	CGCGGTGGGAGGAGCCTATGATGGGAGGGGCCGTTGCGGGGGAGGGGGGAGCCCATGGTGGGAGGAGCCTGTGGTTGAGGAGCCTGCGGTGGGGGGAGCCT	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11776:HG4_PB_assemblyticsfalcon_15602:HG3_PB_HySA_28179:HG3_PB_pbsv_18602:HG2_PB_pbsv_18922:HG3_PB_SVrefine2PBcRDovetail_9271:HG3_PB_SVrefine2Falcon1Dovetail_11754:HG3_Ill_svaba_23245:HG3_Ill_scalpel_17755:HG3_Ill_SVrefine2DISCOVARDovetail_13300:HG3_Ill_GATKHC_29424:HG3_Ill_GATKHCSBGrefine_12153:HG2_Ill_svaba_23026:HG2_Ill_scalpel_17409:HG2_Ill_manta_4982:HG2_Ill_GATKHC_29530:HG2_Ill_GATKHCSBGrefine_12300:HG2_Ill_250bpfermikitraw_24528:HG2_Ill_150bpfermikitraw_23104:HG2_10X_allpass_2870:HG2_Ill_breakscan11_2704;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_2870:HG2_Ill_150bpfermikitraw_23104:HG2_Ill_250bpfermikitraw_24528:HG2_Ill_GATKHCSBGrefine_12300:HG2_Ill_GATKHC_29530:HG2_Ill_manta_4982:HG2_Ill_scalpel_17409:HG2_Ill_svaba_23026:HG3_Ill_GATKHCSBGrefine_12153:HG3_Ill_GATKHC_29424:HG3_Ill_SVrefine2DISCOVARDovetail_13300:HG3_Ill_scalpel_17755:HG3_Ill_svaba_23245:HG3_PB_SVrefine2Falcon1Dovetail_11754:HG3_PB_SVrefine2PBcRDovetail_9271;NumExactMatchSVs=15;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.049505;PBcalls=7;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-100;DistBack=13;DistForward=5725;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=258;REFWIDENED=20:62184678-62185035;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2283.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:24:0|1:28:3:2:21:./.:0:12:21:2:0/1:9:9:./.:.:.:.:.:.
chr20	62309030	HG4_PB_SVrefine2PBcRDovetail_9526	CCTGTGTAGCCTCTTCCTTCGCCTGTTGGTGGATTTGGCCTGCACGGATTCTGTGTGGCCTCTTCCTTCCCCTGTTGGTGGATTTGGCCTGCACGGATTCTGTGTGGCCTCTTCCTTCCCCTGTTGGTGGATTTGGCCTGCACGGATT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13227:HG3_PB_SVrefine2PBcRDovetail_9278:HG2_PB_SVrefine2Falcon1plusDovetail_7165:HG4_PB_pbsv_18865:HG2_PB_pbsv_18933:HG4_Ill_SVrefine2DISCOVARDovetail_13118:HG2_PB_SVrefine2PB10Xhap12_13846:HG3_PB_pbsv_18615:HG4_PB_SVrefine2PBcRDovetail_9526:HG4_PB_SVrefine2Falcon1Dovetail_11785:HG3_Ill_SVrefine2DISCOVARDovetail_13306:HG2_PB_SVrefine2PBcRplusDovetail_6648:HG2_PB_SVrefine2PB10Xhap12_13845:HG2_PB_SVrefine2Falcon2Bionano_9363;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13227:HG4_PB_SVrefine2PBcRDovetail_9526:HG4_PB_SVrefine2Falcon1Dovetail_11785:HG3_Ill_SVrefine2DISCOVARDovetail_13306:HG2_PB_SVrefine2PBcRplusDovetail_6648:HG2_PB_SVrefine2PB10Xhap12_13845:HG2_PB_SVrefine2Falcon2Bionano_9363;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0271186;ClusterMaxSizeDiff=0.0271186;ClusterMaxEditDist=0.0341297;PBcalls=11;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-147;DistBack=-148;DistForward=-128;DistMin=-148;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=226;REFWIDENED=20:62309031-62309403;PctSeqSimilarity=0.9857;PctSizeSimilarity=1;PctRecOverlap=0.8649;SizeDiff=0;StartDistance=-20;EndDistance=-20;GTMatch=0;TruScore=95;MatchId=2284.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:34:./.:11:4:0:29:./.:2:0:3:0:./.:19:2:./.:.:.:.:.:.
chr20	62362809	HG4_Ill_250bpfermikitraw_24164	GGTGTGTATGTGTGCATGTGCATACGTGTGTAAAGTGTACAATTGGCCCTTGGTGTGTGTGTGATTGTGTGCATACGTGTGTAAAGTGTACAGTTGGCCCTTGGT	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24537:HG4_PB_pbsv_18867:HG3_PB_SVrefine2Falcon1Dovetail_11762:HG2_PB_SVrefine2PB10Xhap12_13847:HG2_PB_SVrefine2Falcon2Bionano_9364:HG2_10X_SVrefine210Xhap12_13228:HG3_PB_assemblyticsfalcon_15836:HG2_PB_pbsv_18935:HG3_PB_pbsv_18617:HG4_Ill_scalpel_16994:HG4_Ill_GATKHC_29500:HG4_Ill_GATKHCSBGrefine_12707:HG4_Ill_250bpfermikitraw_24164:HG3_Ill_scalpel_17759:HG3_Ill_GATKHC_29434:HG3_Ill_GATKHCSBGrefine_12157:HG3_Ill_250bpfermikitraw_23844:HG3_10X_allpass_3520:HG2_Ill_scalpel_17412:HG2_Ill_GATKHC_29539:HG2_Ill_GATKHCSBGrefine_12304;NumClusterSVs=21;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24537:HG4_Ill_scalpel_16994:HG4_Ill_GATKHC_29500:HG4_Ill_GATKHCSBGrefine_12707:HG4_Ill_250bpfermikitraw_24164:HG3_Ill_scalpel_17759:HG3_Ill_GATKHC_29434:HG3_Ill_GATKHCSBGrefine_12157:HG3_Ill_250bpfermikitraw_23844:HG3_10X_allpass_3520:HG2_Ill_scalpel_17412:HG2_Ill_GATKHC_29539:HG2_Ill_GATKHCSBGrefine_12304;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0980392;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.258706;PBcalls=7;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-104;DistBack=7978;DistForward=675;DistMin=675;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=357;REFWIDENED=20:62362649-62363109;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2285.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:26:0|1:16:5:4:20:1|0:0:18:59:2:0/1:16:9:./.:.:.:.:.:.
chr20	62408400	HG4_Ill_GATKHC_29504	CCACACGCCACGGTTCCAGCACACGCCACGGTTCCACCACACGCCACGGTTCCAGCACACGCCACGGTTCCACCACACGCCACGGTTCCAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13230:HG2_PB_pbsv_18939:HG2_Ill_breakscan11_2711:HG4_Ill_manta_4238:HG4_Ill_Krunchall_25185:HG4_Ill_GATKHC_29504:HG4_Ill_GATKHCSBGrefine_12710:HG4_Ill_250bpfermikitraw_24166:HG4_Ill_150bpfermikitraw_23249:HG3_Ill_Krunchall_24407:HG3_Ill_GATKHC_29438:HG3_Ill_GATKHCSBGrefine_12159:HG3_Ill_250bpfermikitraw_23847:HG2_PB_assemblyticsfalcon_15901:HG2_PB_SVrefine2Falcon1plusDovetail_7167:HG2_Ill_manta_4984:HG2_Ill_SpiralSDKrefine_10018:HG2_Ill_Krunchall_24887:HG2_Ill_GATKHC_29543:HG2_Ill_GATKHCSBGrefine_12307:HG2_Ill_250bpfermikitraw_24540:HG4_PB_HySA_27227:HG4_PB_pbsv_18870:HG3_PB_pbsv_18621:HG4_PB_SVrefine2PBcRDovetail_9527:HG4_PB_SVrefine2Falcon1Dovetail_11787:HG4_Ill_SVrefine2DISCOVARDovetail_13119:HG3_PB_SVrefine2Falcon1Dovetail_11764:HG3_Ill_SVrefine2DISCOVARDovetail_13308:HG2_Ill_SVrefine2DISCOVARplusDovetail_7738;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24540:HG2_Ill_GATKHCSBGrefine_12307:HG2_Ill_GATKHC_29543:HG2_Ill_Krunchall_24887:HG2_Ill_SpiralSDKrefine_10018:HG2_Ill_manta_4984:HG2_PB_SVrefine2Falcon1plusDovetail_7167:HG2_PB_assemblyticsfalcon_15901:HG3_Ill_250bpfermikitraw_23847:HG3_Ill_GATKHCSBGrefine_12159:HG3_Ill_GATKHC_29438:HG3_Ill_Krunchall_24407:HG4_Ill_150bpfermikitraw_23249:HG4_Ill_250bpfermikitraw_24166:HG4_Ill_GATKHCSBGrefine_12710:HG4_Ill_GATKHC_29504:HG4_Ill_Krunchall_25185:HG4_Ill_manta_4238;NumExactMatchSVs=18;ClusterMaxShiftDist=0.190955;ClusterMaxSizeDiff=0.190955;ClusterMaxEditDist=0.22;PBcalls=9;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=16;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-90;DistBack=4304;DistForward=-67;DistMin=-67;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=88;REFWIDENED=20:62408336-62408513;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2286.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:41:0|1:39:2:3:33:0|1:32:0:0:24:0/1:20:19:./.:.:.:.:.:.
chr20	62481178	HG2_PB_SVrefine2PB10Xhap12_13849	ACCACCTCCGCTGCCGCCGGGTCCCCTGCCCCGCCAACCAACCACGCATCTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13233:HG2_PB_HySA_34206:HG4_Ill_Spiral_1440:HG3_PB_HySA_28198:HG3_Ill_Spiral_18968:HG2_Ill_Spiral_1209:HG2_PB_pbsv_18944:HG4_PB_pbsv_18872:HG4_PB_HySA_27228:HG2_PB_HySA_34205:HG4_Ill_svaba_22968:HG4_Ill_SVrefine2DISCOVARDovetail_13122:HG4_Ill_Krunchall_25187:HG4_Ill_GATKHC_29506:HG4_Ill_250bpfermikitraw_24167:HG3_PB_pbsv_18625:HG3_PB_SVrefine2PBcRDovetail_9282:HG3_Ill_svaba_23261:HG3_Ill_SVrefine2DISCOVARDovetail_13311:HG3_Ill_Krunchall_24410:HG3_Ill_GATKHC_29441:HG3_Ill_250bpfermikitraw_23849:HG3_Ill_150bpfermikitraw_23143:HG2_PB_SVrefine2PBcRplusDovetail_6650:HG2_PB_SVrefine2PB10Xhap12_13849:HG2_PB_SVrefine2Falcon2Bionano_9368:HG2_Ill_svaba_23041:HG2_Ill_SVrefine2DISCOVARplusDovetail_7740:HG2_Ill_Krunchall_24890:HG2_Ill_GATKHC_29547:HG2_Ill_GATKHCSBGrefine_12310:HG2_Ill_250bpfermikitraw_24542:HG2_Ill_150bpfermikitraw_23113;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13233:HG4_Ill_svaba_22968:HG4_Ill_SVrefine2DISCOVARDovetail_13122:HG4_Ill_Krunchall_25187:HG4_Ill_GATKHC_29506:HG4_Ill_250bpfermikitraw_24167:HG3_PB_pbsv_18625:HG3_PB_SVrefine2PBcRDovetail_9282:HG3_Ill_svaba_23261:HG3_Ill_SVrefine2DISCOVARDovetail_13311:HG3_Ill_Krunchall_24410:HG3_Ill_GATKHC_29441:HG3_Ill_250bpfermikitraw_23849:HG3_Ill_150bpfermikitraw_23143:HG2_PB_SVrefine2PBcRplusDovetail_6650:HG2_PB_SVrefine2PB10Xhap12_13849:HG2_PB_SVrefine2Falcon2Bionano_9368:HG2_Ill_svaba_23041:HG2_Ill_SVrefine2DISCOVARplusDovetail_7740:HG2_Ill_Krunchall_24890:HG2_Ill_GATKHC_29547:HG2_Ill_GATKHCSBGrefine_12310:HG2_Ill_250bpfermikitraw_24542:HG2_Ill_150bpfermikitraw_23113;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0970874;ClusterMaxSizeDiff=0.0970874;ClusterMaxEditDist=0.135922;PBcalls=11;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=18;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=-3876;DistForward=3823;DistMin=-3876;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=103;REFWIDENED=20:62481179-62481332;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2287.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:30:1/1:0:6:1:9:1/1:0:7:0:5:1/1:0:41:./.:.:.:.:.:.
chr20	62722087	HG2_PB_SVrefine2Falcon1plusDovetail_7180	CCACTGATCTGGGGCCCAGCTGTGGCAGAGGTGCCCTGGGCACTGATCTGGGGCCCAGCTGTGGCAGAGGTGCCCTGGGCACTGATCTGGGGCCCAGCTGTGGCAGAGGTGCCCTGGGCACTGATCTGGGGCCCAGCTGTGGCAGAGGTGCCCTGGGCACTGATCTGGGGCCCAGCTGTGGCAGGGGTGCCCTGGGCACTGATCTGGGGCCCAGCTGTGGCAGAGGTGCCCTGGG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7180:HG2_PB_pbsv_18958:HG4_PB_pbsv_18881:HG3_PB_assemblyticsfalcon_15853:HG3_PB_SVrefine2Falcon1Dovetail_11778:HG3_PB_pbsv_18638:HG4_PB_SVrefine2Falcon1Dovetail_11795:HG3_PB_SVrefine2Falcon1Dovetail_11777:HG2_PB_SVrefine2PBcRplusDovetail_6657:HG2_PB_SVrefine2PB10Xhap12_13857;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7180:HG2_PB_SVrefine2PB10Xhap12_13857;NumExactMatchSVs=2;ClusterMaxShiftDist=0.284672;ClusterMaxSizeDiff=0.284672;ClusterMaxEditDist=0.288321;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-234;DistBack=-118;DistForward=-234;DistMin=-234;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=391;REFWIDENED=20:62722088-62722712;PctSeqSimilarity=0.9936;PctSizeSimilarity=1;PctRecOverlap=0.8809;SizeDiff=0;StartDistance=-28;EndDistance=-28;GTMatch=1;TruScore=95;MatchId=2289.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:0/1:10:26:1/1:1:10:1:11:./.:0:0:0:0:0/1:6:4:./.:.:.:.:2339:.
chr21	16275282	HG3_Ill_manta_4073	TTGCAGTGAGCCGAGATCGTGCCACTGCACGCCAGCCTGGGGACAGAGCAAGACGCTGTTTCAAAAAAAAAAAATAATAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_19044:HG2_PB_HySA_34295:HG4_PB_pbsv_18951:HG4_PB_assemblyticsfalcon_15721:HG4_Ill_svaba_23042:HG4_Ill_scalpel_17052:HG4_Ill_manta_4250:HG4_Ill_Krunchall_25344:HG4_Ill_GATKHC_29663:HG4_Ill_GATKHCSBGrefine_12763:HG4_Ill_250bpfermikitraw_24304:HG4_Ill_150bpfermikitraw_23378:HG4_CG_vcfBeta_11687:HG4_10X_allpass_3389:HG3_PB_pbsv_18705:HG3_Ill_svaba_23343:HG3_Ill_scalpel_17808:HG3_Ill_manta_4073:HG3_Ill_Krunchall_24547:HG3_Ill_GATKHC_29602:HG3_Ill_GATKHCSBGrefine_12201:HG3_Ill_250bpfermikitraw_23985:HG3_Ill_150bpfermikitraw_23260:HG3_CG_vcfBeta_10064:HG3_10X_allpass_3535:HG2_PB_pbsv_19022:HG2_PB_assemblyticsfalcon_16021:HG2_PB_assemblyticsPBcR_15529:HG2_Ill_svaba_23113:HG2_Ill_scalpel_17457:HG2_Ill_manta_5005:HG2_Ill_SpiralSDKrefine_10081:HG2_Ill_Krunchall_25013:HG2_Ill_GATKHC_29699:HG2_Ill_GATKHCSBGrefine_12357:HG2_Ill_250bpfermikitraw_24672:HG2_Ill_150bpfermikitraw_23223:HG2_CG_vcfBeta_10629:HG2_10X_allpass_2877:HG2_Ill_breakscan11_2724;NumClusterSVs=40;ExactMatchIDs=HG2_10X_allpass_2877:HG2_CG_vcfBeta_10629:HG2_Ill_150bpfermikitraw_23223:HG2_Ill_250bpfermikitraw_24672:HG2_Ill_GATKHCSBGrefine_12357:HG2_Ill_GATKHC_29699:HG2_Ill_Krunchall_25013:HG2_Ill_SpiralSDKrefine_10081:HG2_Ill_manta_5005:HG2_Ill_scalpel_17457:HG2_Ill_svaba_23113:HG2_PB_assemblyticsPBcR_15529:HG2_PB_assemblyticsfalcon_16021:HG2_PB_pbsv_19022:HG3_10X_allpass_3535:HG3_CG_vcfBeta_10064:HG3_Ill_150bpfermikitraw_23260:HG3_Ill_250bpfermikitraw_23985:HG3_Ill_GATKHCSBGrefine_12201:HG3_Ill_GATKHC_29602:HG3_Ill_Krunchall_24547:HG3_Ill_manta_4073:HG3_Ill_scalpel_17808:HG3_Ill_svaba_23343:HG3_PB_pbsv_18705:HG4_10X_allpass_3389:HG4_CG_vcfBeta_11687:HG4_Ill_150bpfermikitraw_23378:HG4_Ill_250bpfermikitraw_24304:HG4_Ill_GATKHCSBGrefine_12763:HG4_Ill_GATKHC_29663:HG4_Ill_Krunchall_25344:HG4_Ill_manta_4250:HG4_Ill_scalpel_17052:HG4_Ill_svaba_23042:HG4_PB_assemblyticsfalcon_15721:HG4_PB_pbsv_18951;NumExactMatchSVs=37;ClusterMaxShiftDist=0.025;ClusterMaxSizeDiff=0.025;ClusterMaxEditDist=0.025;PBcalls=7;Illcalls=27;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=25;TenXexactcalls=3;CGexactcalls=3;HG2count=16;HG3count=12;HG4count=12;NumTechs=4;NumTechsExact=4;SVLEN=-79;DistBack=10913;DistForward=6146;DistMin=6146;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=21:16275281-16275363;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2290.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:61:1/1:5:22:1:25:1/1:0:22:0:20:1/1:1:38:./.:.:.:.:.:.
chr21	16588378	HG2_10X_SVrefine210Xhap12_13257	GATAACAATGGTTGCCTGTACACTTCACTGGTCATTGTGAGTAACAATGAGAAACAATAGAATAAAGGCATAAGTGCATCTCAAGTTGTCAGGTGCTAAATCTTTGTAAGGGTGGTGAGTATTATTCTTCCTGGATGGAGTTCTTTCTCCTCCACTGGTTTATTTTCTTAGTTTCTGAGAATGCATATATTTGTTAATAACTCACCCAGAATGTTGAAGTAAATATTTTTTTAGTCCTTTAATCATCAGAGGAGACATGTTAGCCTGATTAAAATATCTATCCTTGATATCAATCTACTTGCGTATTAGTCTGTTCCCACAGTCAAATGAAAGTATGGCCCTTTTCCGAATTCCAGAAGCTCAAAGCCTTTCATTTCAGCAAATCTATAAACTAGAGAATTTCTTGTCTACAAAGTACTAGTTCATGGTTTGTGGTCCTTTTGACACCTGTGACATTGACTCTCTACAAGATCCTTGAGGGCACAGACTTTTTGTTAGGACAAGTTTTCCAATATCCACCCAGTTGCCACTAGAGTTGTGTTAAAACAGAGTACTGTTGAGATGCCACCCTACTTAAAATCTGTCACTCAACTCATCGAAACTGATTGTTTCGATGCAATTCAGGAAACAGATATTTTGGGTTATATCAGGGCTAGGCTCTGTGCTAGGTACAAAGCAATTCAACAAGGACTTAGATATGATAGGAGCCCTCCAGGAGCCCCTCCTGCTTATGTGATGTTACTCAACTCCACGGGATGGCAGCTGGGCTTTAAAAAATCTTTCTCTAACTTAAAACACAAACCATGTTAAAGGCAGTTTTCAGAAAAATGGAAAAATTTAATATGAGCCTCTATTAGATGATATCTGACCATCTAATAAATTATCATTGATTTTATTTGTGATAATGGCATTGTGATATATAAGAAAATATCCACCTTTTTAGAGATACACATCAAAATCAGAAGATGTAAACTAATAGATGTCTGCAGTATACTTTAAAAAAAAATTAAGCGAAAAAAAGAAAAAACAAAACAAAACAAAACAGGTTGATGAACAAATGGGCCAAAATTTTTTTGAGACCGTGTCTTACTGTGTCACCCAGAGGCTGGAATGCGTTGGTGTGATTATGGCTCACGGCAGCCTTGACCCCCCCGGGCTCAGACAATCCTCCTACCTCAGCCTCCAGTGTAGCTGGAACCACAGGTACACACCACCATGCCTGACTTTTTTTTTTTCATGTTTCATAGAGACCAGGTCTCACTGTGCTGCCTAGGCTGGTCTCAGACTCCTGGGCTCAACCAATCCACACACCTCAGCCTTCCAAAGTGGCAGGATTACAGATGTGAGCCACCATACCTGGCGCCAAATTTTGATAATTGTTAAATGTAAGTAATAGGCCTTTGAGGAATCATTTTATTATTCTCTTTCCTTTTGTGAATTCTTGGAATCTTTCATAATAAACACATTTAAAGAATTGGTTTCCCAAACTTCTAGACTTTTATTCACTTAGGATTAGCCTTAGCACCCATAGCAGTGTGTCCGGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAACGAAGCCGCGGACCCTCGCGGTGAGTATTACAGCCCTTAAGGTGGCGCGTCTGGAGTTTGTCCCTTCTGATGTTCAGATGTGTTCGGAGTTTCCTTTTTCTGGTGGGTTCGTGGCCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAGTGTTACAGCTCTTAAGGCAGCGCGTCTGGAGTTGTTCGTTCCTCCCGGTGGGCTCGTGGTCTCGCCGGGCTCAGAACTGAAGCTGCAGATCTTCGCGGTGAGTGTTACAGCTCATAAATGCAGCGTGGACCCAAAGAGTGAGCAATAGCAAGATTTATTGCAAAGAGCGAAAGAACAAAGCTTCCACAGTGTGGAAGGGGACCCGAGCGGGTTGCCAATGCTGGCTCGGGCAGCCTGCGTTTATTCTCTTATTTGGCCCCACCCATATCCTGCTGATTGGTAGAGCCGAGTGGCCTGTTTTGTCGGGGCGCTGATTGGTGCGTTTACAATCCCTGAGCTAGATACAAAGGTTCTCCACGTCCCCATCAGATTAGTTAGATACAGAGTTTGGACACACAGGTTCTCCAAGGCCCCACCAGAGCAGCTAGATACAGAGTGTCGATTGGTGCACTCACAAACCTTGAGCTAAACACAGGGTGCTGATTGGTGTGTTTACAAACCCTGAGCCAGACACAGAGTGCCGATTGGTGTATTTACAAACCTTGAGCTAGACATAAAGGTTCTCCACGTCCTCACCAGAGCAGCTAGATACAGAGTGTCGATTGGTGCACTCACAAACCTTGAGCTAAACACAGGGTGCTGATTGGTGTGTTTACAATCCCTGAGCTAGATATAAAGACTCCCCACATCCCCACCAGACTCAGGAGTCCAGCTGGCTTCACCTAGTGGATCCCGCACCGGGACTGCAGGTGGAGCTGCCTGCCAGTCCTGCGCCGTGCGCTCGCATTCCTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCAGTGGAGTAGGGGGTGGTGCTCCTAGGGGAGGCTCGGGCCGCACAGGAGCCCATGGAGTGGGTGGGAGGCTCAGGCATGGCGGGCTGCAGGTCCCGAGCCCTGCCCCGCGGGAAGGCAGCCAAGGCCCAGCGAGAAATCGAGCACAGTGCCGGTGGGCCGGCACTGCTGGGGGACTCAGTACACCCTCCGCAGCCACTGGCCCGGGTGCTAAGTCCCCCATTGCCCGGGGCCAGCAGGGCTTGCTGGCTGCTCCGAGTGCGGGGCCCACCAAGCCCACGCCCACCCGGAACTCCAGCTGGCCCGCAAGCGCCGCACGCAGCCCCGGTTCCCGCTCGTGCCTCTCCCTCCACACCTCCCTGCAAGCTGAGGGAGTGGGCTCCAGCCTTGGCCAGCCCAGAAAGGGGCTCCCACAGTGCATTGGGGGGGTGGGTGGCTGAAGGGCTCCTCAAATGCCACCGAAGTGGGAGCCCAGGCAGGGGAGGTGCCGAGAGCAAGCGAGGGCTCTGAGGACTGCCAGC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_18953:HG2_10X_allpass_2878:HG3_10X_allpass_3536:HG4_Ill_Krunchall_25345:HG3_Ill_Krunchall_24548:HG2_Ill_Krunchall_25014:HG4_10X_allpass_3390:HG2_PB_assemblyticsfalcon_16023:HG2_PB_assemblyticsPBcR_15531:HG4_PB_assemblyticsfalcon_15723:HG3_PB_assemblyticsfalcon_15953:HG2_PB_pbsv_19024:HG2_Ill_tnscope_1977:HG4_PB_SVrefine2PBcRDovetail_9569:HG4_PB_SVrefine2Falcon1Dovetail_11853:HG4_Ill_MetaSV_3075:HG3_PB_pbsv_18707:HG3_PB_SVrefine2PBcRDovetail_9330:HG3_PB_SVrefine2Falcon1Dovetail_11826:HG3_Ill_SVrefine2DISCOVARDovetail_13332:HG3_Ill_MetaSV_3123:HG3_Ill_GATKHCSBGrefine_12202:HG2_PB_SVrefine2PBcRplusDovetail_6715:HG2_PB_SVrefine2PB10Xhap12_13901:HG2_PB_SVrefine2Falcon1plusDovetail_7247:HG2_PB_HySA_34297:HG2_Ill_SVrefine2DISCOVARplusDovetail_7751:HG2_Ill_MetaSV_2969:HG2_10X_SVrefine210Xhap12_13257;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13257:HG2_Ill_MetaSV_2969:HG2_Ill_SVrefine2DISCOVARplusDovetail_7751:HG2_PB_HySA_34297:HG2_PB_SVrefine2Falcon1plusDovetail_7247:HG2_PB_SVrefine2PB10Xhap12_13901:HG2_PB_SVrefine2PBcRplusDovetail_6715:HG3_Ill_GATKHCSBGrefine_12202:HG3_Ill_MetaSV_3123:HG3_Ill_SVrefine2DISCOVARDovetail_13332:HG3_PB_SVrefine2Falcon1Dovetail_11826:HG3_PB_SVrefine2PBcRDovetail_9330:HG3_PB_pbsv_18707:HG4_Ill_MetaSV_3075:HG4_PB_SVrefine2Falcon1Dovetail_11853:HG4_PB_SVrefine2PBcRDovetail_9569;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00325627;ClusterMaxSizeDiff=0.00325627;ClusterMaxEditDist=0.00325627;PBcalls=15;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-3074;DistBack=142067;DistForward=-3074;DistMin=-3074;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=21:16588379-16591454;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2291.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:43:61:0|1:40:0:0:41:1|0:0:21:53:0:0/1:77:17:0/1:269:117:3115:.:.
chr21	17381497	HG2_Ill_250bpfermikitraw_24675	ATATTATATGTATACATATTATATATTAATATATGTATTATATGTATACATATTATATATTAATATATG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13260:HG4_PB_pbsv_18954:HG2_PB_pbsv_19025:HG4_Ill_svaba_23047:HG4_Ill_Krunchall_25348:HG4_Ill_GATKHCSBGrefine_12764:HG4_Ill_250bpfermikitraw_24310:HG2_Ill_svaba_23116:HG2_Ill_SpiralSDKrefine_10085:HG2_Ill_GATKHCSBGrefine_12358:HG2_Ill_250bpfermikitraw_24675;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24675:HG2_Ill_GATKHCSBGrefine_12358:HG2_Ill_SpiralSDKrefine_10085:HG2_Ill_svaba_23116:HG4_Ill_250bpfermikitraw_24310:HG4_Ill_GATKHCSBGrefine_12764:HG4_Ill_Krunchall_25348:HG4_Ill_svaba_23047;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0147059;ClusterMaxSizeDiff=0.0145985;ClusterMaxEditDist=0.0294118;PBcalls=2;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-68;DistBack=14540;DistForward=-40;DistMin=-40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=84;REFWIDENED=21:17381494-17381645;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2292.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:23:1|0:4:15:28:7:0|1:17:0:0:14:0/1:28:25:./.:.:.:.:.:.
chr21	18297440	HG2_Ill_150bpfermikitraw_23235	CAGAACATGTATAACATTGGCTTGGAGTAAGAGTCAAGGACAGAAGTTAGGT	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23235:HG3_PB_HySA_28329:HG2_PB_HySA_34310:HG4_PB_pbsv_18961:HG2_PB_pbsv_19031:HG4_Ill_GATKHC_29679:HG4_Ill_GATKHCSBGrefine_12773:HG3_Ill_GATKHC_29621:HG3_Ill_GATKHCSBGrefine_12209:HG2_Ill_GATKHC_29711:HG2_Ill_GATKHCSBGrefine_12367:HG2_Ill_SpiralSDKrefine_10093:HG4_PB_assemblyticsfalcon_15736:HG3_PB_assemblyticsfalcon_15966:HG2_PB_assemblyticsfalcon_16037:HG2_PB_assemblyticsPBcR_15543:HG3_PB_pbsv_18715:HG4_PB_HySA_27318:HG4_Ill_svaba_23061:HG4_Ill_Krunchall_25358:HG4_Ill_250bpfermikitraw_24321:HG3_Ill_svaba_23360:HG3_Ill_Krunchall_24558:HG3_Ill_250bpfermikitraw_24000:HG2_Ill_svaba_23130:HG2_Ill_Krunchall_25027:HG2_Ill_250bpfermikitraw_24687;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23235:HG4_PB_HySA_27318:HG4_Ill_svaba_23061:HG4_Ill_Krunchall_25358:HG4_Ill_250bpfermikitraw_24321:HG3_Ill_svaba_23360:HG3_Ill_Krunchall_24558:HG3_Ill_250bpfermikitraw_24000:HG2_Ill_svaba_23130:HG2_Ill_Krunchall_25027:HG2_Ill_250bpfermikitraw_24687;NumExactMatchSVs=11;ClusterMaxShiftDist=0.185567;ClusterMaxSizeDiff=0.185567;ClusterMaxEditDist=0.189474;PBcalls=10;Illcalls=17;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=5085;DistForward=15941;DistMin=5085;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=142;REFWIDENED=21:18297417-18297609;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2293.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:47:./.:0:0:0:0:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr21	18457487	HG4_Ill_GATKHCSBGrefine_12774	CATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	C	20	PASS	ClusterIDs=HG2_Ill_svaba_23137:HG3_Ill_Krunchall_24564:HG3_Ill_GATKHC_29628:HG3_Ill_GATKHCSBGrefine_12210:HG3_Ill_250bpfermikitraw_24009:HG3_Ill_150bpfermikitraw_23285:HG2_PB_assemblyticsPBcR_15549:HG3_PB_assemblyticsfalcon_15970:HG2_PB_pbsv_19034:HG4_PB_pbsv_18964:HG3_PB_pbsv_18719:HG4_PB_assemblyticsfalcon_15739:HG4_Ill_Krunchall_25366:HG4_Ill_GATKHC_29687:HG4_Ill_GATKHCSBGrefine_12774:HG4_Ill_250bpfermikitraw_24329:HG4_Ill_150bpfermikitraw_23398:HG2_PB_assemblyticsfalcon_16042:HG2_Ill_GATKHC_29719:HG2_Ill_GATKHCSBGrefine_12368:HG2_Ill_250bpfermikitraw_24695:HG2_Ill_150bpfermikitraw_23243:HG3_Ill_GATKHC_29627:HG3_Ill_250bpfermikitraw_24008:HG3_Ill_150bpfermikitraw_23284:HG2_Ill_SVrefine2DISCOVARplusDovetail_7759:HG3_PB_HySA_28337:HG2_PB_HySA_34325:HG4_PB_HySA_27327:HG3_Ill_svaba_23368;NumClusterSVs=30;ExactMatchIDs=HG2_PB_assemblyticsfalcon_16042:HG4_Ill_150bpfermikitraw_23398:HG4_Ill_250bpfermikitraw_24329:HG4_Ill_GATKHCSBGrefine_12774:HG4_Ill_GATKHC_29687:HG4_Ill_Krunchall_25366:HG4_PB_assemblyticsfalcon_15739;NumExactMatchSVs=7;ClusterMaxShiftDist=0.184615;ClusterMaxSizeDiff=0.184615;ClusterMaxEditDist=0.184615;PBcalls=10;Illcalls=20;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=12;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-68;DistBack=20735;DistForward=15110;DistMin=15110;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=27;REFWIDENED=21:18457488-18457582;PctSeqSimilarity=0.9853;PctSizeSimilarity=0.9706;PctRecOverlap=0.971;SizeDiff=2;StartDistance=0;EndDistance=2;GTMatch=1;TruScore=97;MatchId=2294.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:75:1/1:3:35:3:38:./.:2:11:6:6:0/1:3:23:./.:.:.:.:.:.
chr21	18612329	HG4_PB_SVrefine2PBcRDovetail_9574	AATAATAATTATAAAAACTATGGAAGAAATGACTGTTGCTGAGGGCTGTCATTTCACTGGAGAAAGACAATGGAAAACTGGAGATAATTAATTACCAATTTAAAGTAAGTGTGAAAACCACAGGGATTGTTTGGCAGCATATGAAGAATCTCTGCCCCAGGGTGGTTGGCAAGATGGCCAAATAGAAACAGCTCCGGTCTGCAGCTCCCAGTGAGATCAACGCAGAAGGCAGGTGACTTCTGCATTTCCAACTGAGGTACTCGGCTCATCTCACCGGGAGTGATTAGACAGTAGGTGCAGCCCACAGAGGGCAAGACAAAGCAGGGTGGGGTGTCGCCTCACCTGGGAAGCACAAGGGGTCAAAGAGCTCCTTTCCCTAGCCAAGGGAAGCAATGAGAGACTGTGCCATAAGGAACAACGAATTCTGGCCCAGAAACTATGCTTTCCCCACAGTCTTCACAACCTGCAGACCAAGAGATTCCCTCAAGTGGCTACACCATCAGGGCCCTAGGTTTCAAGCACAAAACTGGGTGGCCATTTAGGCAGGCACTGAGCTAGCTGCAGGAGTTTTTTTCATACCCCAGTGGCACCTGGAATGCCAGTGAGACAGAACCATTCATTCCCCTGGAAAGAGGGCTGAAGCCAGGAAGCCAAGTGGTCTAGCTCAGTGGATCCCACCCCCATGGAGCCCAGCAAGCTAAGATCCACTGGCTTGAAATGCTTGCTGCCAGCACAACAGTTTGAAGTCAACCTGGGATGCTCGAGCTTGGTGGGGTAGGGGTGTCCAGCATTACTGAGACTCGAGAAAGCTGTTTTCCCCTTACAGTGTAAACAAAGCTGCCAGGAAGTTCAGACTGGGCAGAGCCCATCACAGCTTGGCAAAGCTGCTATAGCCAGCCTTCCTCTCTAGATTTCTCCTCTCTGGGCAAGGCATCTCTGAAAGAAAGGCACCAGCCCCTGTTAGGGGCTTATAGATAAAACTCCCATCTCCTTGGGACAGAGCACCTGGGGGAAAAGAGGGCTGTGGACACAGGTTTAGCAGACTTAAACATTCCTGCCTGCCAGCTCTGAAGAGAGTGGCAGATCTCCTAGCATAGCGCTCGAGCTCTGCTAAGGGACAGACTGCCTCCTCAAGTGGGTCTCTGACCCCCATGTCTCCTGACTGGGAGACACCTCCTAGCAGGGGTCGACAGACATGTCATAGAGGAGAGCTCCGGCTGGCATCTGGTGGGTGCCCCTCTGGGAAGAAGCTTCCAGAGGCAGCAAAAGGCAGCAATCTTAGCTGCTCTGCAGCCTCCACTGGTG	A	20	PASS	ClusterIDs=HG2_Ill_tnscope_1978:HG2_Ill_SVrefine2DISCOVARplusDovetail_7763:HG4_Ill_SVrefine2DISCOVARDovetail_13157:HG4_Ill_MetaSV_3079:HG4_PB_HySA_27328:HG4_Ill_Krunchall_25368:HG2_Ill_Krunchall_25033:HG2_PB_assemblyticsPBcR_15551:HG4_PB_assemblyticsfalcon_15742:HG4_PB_pbsv_18965:HG4_PB_assemblyticsfalcon_15741:HG4_PB_SVrefine2PBcRDovetail_9574:HG4_PB_SVrefine2Falcon1Dovetail_11858:HG4_Ill_GATKHCSBGrefine_12775:HG4_10X_allpass_3391:HG2_PB_pbsv_19035:HG2_PB_SVrefine2PBcRplusDovetail_6721:HG2_PB_SVrefine2Falcon2Bionano_9398:HG2_Ill_SpiralSDKrefine_10099:HG2_Ill_GATKHCSBGrefine_12369:HG2_10X_allpass_2880:HG2_10X_SVrefine210Xhap12_13272:HG2_PB_HySA_34326:HG2_Ill_MetaSV_2972;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13272:HG2_10X_allpass_2880:HG2_Ill_GATKHCSBGrefine_12369:HG2_Ill_SpiralSDKrefine_10099:HG2_PB_SVrefine2Falcon2Bionano_9398:HG2_PB_SVrefine2PBcRplusDovetail_6721:HG2_PB_pbsv_19035:HG4_10X_allpass_3391:HG4_Ill_GATKHCSBGrefine_12775:HG4_PB_SVrefine2Falcon1Dovetail_11858:HG4_PB_SVrefine2PBcRDovetail_9574:HG4_PB_assemblyticsfalcon_15741:HG4_PB_pbsv_18965;NumExactMatchSVs=13;ClusterMaxShiftDist=0.277976;ClusterMaxSizeDiff=0.277976;ClusterMaxEditDist=0.277976;PBcalls=11;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=11;NumTechs=3;NumTechsExact=3;SVLEN=-1304;DistBack=-292;DistForward=-1302;DistMin=-1302;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=21:18612330-18613636;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2295.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:57:1|0:2:45:21:0:1|0:0:37:62:0:0/1:35:12:0/1:84:47:1516:3071:.
chr21	19326600	HG2_PB_SVrefine2PB10Xhap12_13914	TAAAGGAAAGAAGAGATAAACCCAAGAACATAGTTGCAAATTTTAACATCCTTGTGAAGGTTAATTTTATGTATAAGCTTGACTGGGCCACTAGATATTCAGATATCTAGTTAAACATTATTTCTGGGTGTGTCTGTGAGTGTTTCTGGAAGAGATCAGCATTTGAATCAGTGAACTGAGTAAAGAAGGTTGTCCTCTCCAATGTGGGTGGGCAACCAATCTGTTGATGGCCTAACTAGAACAAAGAGACAGAGGAAGGGAGAATTTGTTCTCTCTGCCTGACTGAGCTTGGACATCAGTCTTCTCCTGCATTGGACTGTGTTTATACCATCAGTGCAGCTGGTCCTCAGGCCTTTGGACTTGGATTGGAACTTGAAGTAAAGGTTCTGTTGTTTCTCAGGCTTCAGACTCAGGCTGGAAGTACACCACCAGCTTTCCTGAATCTCCAGCTTGCAGATACATATTGCAAGACACATGTTACAGCTCAGCCTCCATAATTCATAAGCCAATTCCTCCAATTATTCATAATTCTCTCTCTGTATATATTTATAAATATATATTTAAAATATAAATATATAATTCTTATATATTTATATTTTAAATTAAATCATATATTTTATATAATATCTATAATTTTATGTAATGTATAATTTTTAAAAAATATTTATAATCTGGGTCTGTTTAGGCTACTGTCATAAACTTTTACTACCATCAACTGGATAGCTTATAGACAAGAGGAATTTATTTCTCACAGTTCTGGAGGCTGGAAAGTCCAAGATGAAGGCACAGGCAGATTCAGTGTCTGGTGAGAGCATGTCCATTAAGGTGTTCTAAGCAAAAGAGCAGTTCTTTTCTAAGAAATTTTTACCTTCAATGTTGACCAACTGAATAAAAATTCAGCCACCTTAAAAATGATAATTTCTTTTTTCACTGAAATAATCTTACCTGCCTGAAGTCATGGGATTAAATATTATCCTGGAGATTCATCTCATGATTGCAGGTGGCATTAAGTGAATGATTAAATGGCTATTCTTAATCTCCTATTGTCCATTTCTGAAAAAGTTTTCCTGAGAAAAACCCTGACTTCTTTAGTAGGGGTTGTGCTATTATTGTCATAGATGTAAATACTGTACAATTGTTCTACTCCTTTCTCTTGAAATCTTACAACCTGACTTTAAGCTCCGCTGTTTTATTACTTTTTTTTCCTCTTGGAAACACCTTTAGTTTTCAGGAGAGTCCTAGGAATATTCAATTAAAATTCTGCATAATGACTCTTTAGACAGTCACCAGGGGAGTACTAATGCAGAAACCATGAGACCAGCTTATCTTAGAGTTGCCAAATATACCTGAAAATCATATAATGAGTGGATTGATATTGCACATAAGAGTCAGAGTAGTGGGAATTTTGATTTGCCCTCAGAAATGATGTGCTTTAGGGAAAAAAATTGCTTGCTTTTTTGGGAATAGACTTTTATAAAAACCTGAAGTGCTGTGAAGCAAGTCAGGGGATTTGGGTTCCAGGGCTTGCATGGTCACTTACTAATTCTGTGGTTAGATGTCTTCAATCCTTTATTTGTCAATAATTTGTGAGGCTGTTTTGAGGATTAAACAAGGATGTCTCAGAAAAGAGCTTCAGAAATATATTAAAGCCCATCTATCTGTTTGACTGAATGCCTTGATCCCGGAAGAAAAAGATTTTGAGGAGTTCATATAACTTTCAGGGAGTCTTTTCATATGTTCTATGGGGATTGCAGGCTAGGAGTATCGAGTCAAAAGAGAAGCATCTCCATCTGATATAGTTTGAATATTTGTCTGCATCCAAATCTCATGTTGAGATGTAATCCCCAGTGTTGGAGATGGGGCCCAGTGGGAGGTGTTGGAATCACGGGGGTGGGTCCTTCATGAATGATTTGGGTCATCTCCTTGATGACAAGTGAACTCTTGCACTGAATTCACATGAGATCTGGTCTTTTAAAAATGTGTGACACCTCCCCTCACTCTCTCTCTCATGCTTCTCCTGCCATGACACGCCTGCTCCACCTTTATCTTATGCCATAATTGAAAGCCTCCTGAGGCCCCCCCAGAAGCAGATGCTAGCACTATGCTTCCTGCACAGCCTCCAGAACTGTGAGCTAATTAAACCTCTTTTCTTATAAATTACCTAGTCTCAGATATTTCTTTATTGCAATGCAAGAACAACCTAAGATACCATCCTTCCAATCTTTATATCAGTTTCTTAGTCTGTTTGGGCTGGCATAACAAAAATATCAAAGACTAGATGGCTTATAAACAACATAAATTTATTTATCACAGTTCTGGAGGCTGAGAGGTCCAAGATCAAGGCACCAGCATATTCAGTGTCTGGTGAGGGCCCACTTCTGGTACCTTAGAGAGCTATCTTCTCACTGTGTTTTCATATGGCAGAAGGGGCCAGAAAATTATCTGGAGTTTTTTCTATGAGTGCACTAATCCCATTCATGAGAGCTGTGTCCTTATGACCTTAACCCCTC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7259:HG4_PB_assemblyticsfalcon_15749:HG3_PB_assemblyticsfalcon_15979:HG4_10X_allpass_3392:HG4_PB_pbsv_18975:HG2_PB_pbsv_19045:HG3_PB_pbsv_18730:HG4_Ill_MetaSV_3080:HG3_Ill_MetaSV_3128:HG4_PB_SVrefine2PBcRDovetail_9580:HG4_PB_SVrefine2Falcon1Dovetail_11865:HG4_Ill_SVrefine2DISCOVARDovetail_13162:HG3_PB_SVrefine2PBcRDovetail_9343:HG3_PB_SVrefine2Falcon1Dovetail_11840:HG2_PB_SVrefine2PBcRplusDovetail_6727:HG2_PB_SVrefine2PB10Xhap12_13914:HG2_PB_SVrefine2Falcon2Bionano_9405:HG2_Ill_SVrefine2DISCOVARplusDovetail_7766:HG2_10X_SVrefine210Xhap12_13279:HG2_PB_assemblyticsfalcon_16051:HG2_PB_SVrefine2PBcRplusDovetail_6728:HG2_PB_assemblyticsPBcR_15559;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13279:HG2_Ill_SVrefine2DISCOVARplusDovetail_7766:HG2_PB_SVrefine2Falcon2Bionano_9405:HG2_PB_SVrefine2PB10Xhap12_13914:HG2_PB_SVrefine2PBcRplusDovetail_6727:HG3_PB_SVrefine2Falcon1Dovetail_11840:HG3_PB_SVrefine2PBcRDovetail_9343:HG4_Ill_SVrefine2DISCOVARDovetail_13162:HG4_PB_SVrefine2Falcon1Dovetail_11865:HG4_PB_SVrefine2PBcRDovetail_9580;NumExactMatchSVs=10;ClusterMaxShiftDist=0.280622;ClusterMaxSizeDiff=0.280622;ClusterMaxEditDist=0.280622;PBcalls=16;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=5;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-2509;DistBack=51165;DistForward=-2291;DistMin=-2291;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=239;REFWIDENED=21:19326601-19329348;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2296.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:37:1|0:0:26:40:1:1|0:0:7:62:0:0/1:43:13:0/1:174:79:2540:.:.
chr21	20231517	HG2_Ill_Krunchall_25040	TTCTATATATATATATATATATATATATGTATATATATATATATATATATATATATATATGTATATATATA	T	20	PASS	ClusterIDs=HG2_PB_HySA_34334:HG4_Ill_scalpel_17066:HG3_PB_HySA_28349:HG4_PB_assemblyticsfalcon_15757:HG4_PB_HySA_27337:HG3_Ill_GATKHC_29647:HG3_Ill_GATKHCSBGrefine_12221:HG4_Ill_GATKHC_29701:HG4_Ill_GATKHCSBGrefine_12784:HG2_Ill_GATKHC_29734:HG2_Ill_GATKHCSBGrefine_12376:HG2_Ill_SpiralSDKrefine_10103:HG4_Ill_Krunchall_25377:HG4_Ill_GATKHC_29700:HG4_Ill_GATKHCSBGrefine_12783:HG4_Ill_250bpfermikitraw_24338:HG4_Ill_150bpfermikitraw_23409:HG2_PB_pbsv_19051:HG4_PB_pbsv_18982:HG4_Ill_scalpel_17065:HG4_Ill_Krunchall_25376:HG4_Ill_250bpfermikitraw_24337:HG4_Ill_150bpfermikitraw_23408:HG4_10X_allpass_3393:HG2_Ill_scalpel_17468:HG2_Ill_manta_5015:HG2_Ill_Krunchall_25040:HG2_Ill_250bpfermikitraw_24702:HG2_Ill_150bpfermikitraw_23250:HG2_10X_allpass_2881:HG3_Ill_scalpel_17828:HG3_Ill_manta_4084:HG3_Ill_Krunchall_24578:HG3_Ill_150bpfermikitraw_23297:HG3_10X_allpass_3537:HG2_PB_assemblyticsfalcon_16059:HG3_PB_pbsv_18737:HG3_PB_assemblyticsfalcon_15989:HG2_PB_assemblyticsPBcR_15566;NumClusterSVs=39;ExactMatchIDs=HG2_10X_allpass_2881:HG2_Ill_150bpfermikitraw_23250:HG2_Ill_250bpfermikitraw_24702:HG2_Ill_Krunchall_25040:HG2_Ill_manta_5015:HG2_Ill_scalpel_17468:HG4_10X_allpass_3393:HG4_Ill_150bpfermikitraw_23408:HG4_Ill_250bpfermikitraw_24337:HG4_Ill_Krunchall_25376:HG4_Ill_scalpel_17065;NumExactMatchSVs=11;ClusterMaxShiftDist=0.23622;ClusterMaxSizeDiff=0.23622;ClusterMaxEditDist=0.276423;PBcalls=10;Illcalls=26;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=16;NumTechs=3;NumTechsExact=2;SVLEN=-70;DistBack=34600;DistForward=8016;DistMin=8016;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=20;REFWIDENED=21:20231520-20231607;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2297.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:41:0|1:39:5:1:34:./.:1:18:31:0:0/1:15:19:./.:.:.:.:.:.
chr21	21598721	HG2_Ill_GATKHC_29745	AAACGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_1210:HG3_PB_SVrefine2PBcRDovetail_9352:HG2_Ill_Krunchall_25048:HG3_PB_pbsv_18745:HG2_PB_pbsv_19058:HG3_PB_HySA_28359:HG3_Ill_svaba_23388:HG3_Ill_GATKHC_29656:HG3_Ill_GATKHCSBGrefine_12228:HG2_PB_SVrefine2Falcon2Bionano_9415:HG2_Ill_svaba_23154:HG2_Ill_GATKHC_29745:HG2_Ill_GATKHCSBGrefine_12384:HG2_10X_allpass_2882:HG2_10X_SVrefine210Xhap12_13286:HG2_Ill_breakscan11_2725;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13286:HG2_10X_allpass_2882:HG2_Ill_GATKHCSBGrefine_12384:HG2_Ill_GATKHC_29745:HG2_Ill_svaba_23154:HG2_PB_SVrefine2Falcon2Bionano_9415:HG3_Ill_GATKHCSBGrefine_12228:HG3_Ill_GATKHC_29656:HG3_Ill_svaba_23388;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0540541;PBcalls=5;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-112;DistBack=5345;DistForward=-81;DistMin=-81;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=21;REFWIDENED=21:21598722-21598854;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2298.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:19:0|1:22:3:2:14:1|0:0:25:26:1:0/1:35:24:./.:.:.:.:.:.
chr21	23636869	HG3_Ill_GATKHC_29688	GTTGATATTTTACCAGATGACAGTTTTACTTGTGTTAAAAACAGAATCATAAACAGTAACTAAACACA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13299:HG3_Ill_Spiral_19091:HG2_PB_pbsv_19075:HG3_PB_pbsv_18765:HG3_Ill_svaba_23407:HG3_Ill_manta_4091:HG3_Ill_Krunchall_24609:HG3_Ill_GATKHC_29688:HG3_Ill_GATKHCSBGrefine_12247:HG3_Ill_250bpfermikitraw_24053:HG3_Ill_150bpfermikitraw_23335:HG2_Ill_svaba_23171:HG2_Ill_manta_5027:HG2_Ill_SpiralSDKrefine_10125:HG2_Ill_Krunchall_25070:HG2_Ill_GATKHC_29771:HG2_Ill_GATKHCSBGrefine_12404:HG2_Ill_250bpfermikitraw_24741:HG2_Ill_150bpfermikitraw_23288:HG3_PB_SVrefine2PBcRDovetail_9365:HG3_Ill_SVrefine2DISCOVARDovetail_13374:HG2_PB_SVrefine2PBcRplusDovetail_6747:HG2_PB_SVrefine2Falcon1plusDovetail_7282:HG2_Ill_SVrefine2DISCOVARplusDovetail_7790;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23288:HG2_Ill_250bpfermikitraw_24741:HG2_Ill_GATKHCSBGrefine_12404:HG2_Ill_GATKHC_29771:HG2_Ill_Krunchall_25070:HG2_Ill_SpiralSDKrefine_10125:HG2_Ill_manta_5027:HG2_Ill_svaba_23171:HG3_Ill_150bpfermikitraw_23335:HG3_Ill_250bpfermikitraw_24053:HG3_Ill_GATKHCSBGrefine_12247:HG3_Ill_GATKHC_29688:HG3_Ill_Krunchall_24609:HG3_Ill_manta_4091:HG3_Ill_svaba_23407;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0294118;ClusterMaxSizeDiff=0.0294118;ClusterMaxEditDist=0.0740741;PBcalls=5;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-67;DistBack=7268;DistForward=-34;DistMin=-34;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=21:23636837-23636974;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2299.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:35:./.:24:9:4:13:1|0:0:19:28:0:0/1:26:21:./.:.:.:.:6503:.
chr21	24374797	HG3_PB_SVrefine2Falcon1Dovetail_11863	ATCAGCTATGGTTTATGGTCTTGAGAAACTGCAAATATGTATATTTACTTTTATAGTTAACATATCTTTTTGGAGCCTTCTAAAAATTTGCTCTGGTTCTCAGTATTTTCATTTCATTCTATCAAGCCTTGCTAGCTGTGGGCAAATGAGTAAATAGTTTCACTCTAGGTGAGCATCACTAATAATTGTATTTTTGTGAGTTGGGCGAGTACCGTTTAAAGCATGCTCTTTTGGATTATGCTAGATAATAATTTGGAGAAGTATTAAATGTGTATCCTTGTAAACTGAAATAATTTAAACATATAAGTATATAATTAGTATGTTTAAATTCTGTTATTTGAACAATCATAATAATATTGATTTAAAGTGATATTTATTAATTGCTTGTTTTTAGATAAGATTTTGTTTACTCCTAAAGTCATACTGCCACTAAGTTGGACGGGTAGAACTTGAACCATAGTTCTAAATTCAACGACTCTGTGTTATTATAATCTTTGCTACCATTATTGAGAAAAGGTTATCTATACCCAGAACTTTAACATTTTATACAGTTAATTGGAAAAATAATTTCAGGCTCGGAGACTTTTATGACCTTTCTTGACTATACTATTGGTC	G	20	PASS	ClusterIDs=HG2_Ill_Krunchall_25081:HG3_Ill_manta_4094:HG2_Ill_manta_5030:HG2_Ill_tnscope_1979:HG4_PB_SVrefine2Falcon1Dovetail_11891:HG3_PB_assemblyticsfalcon_16027:HG3_PB_SVrefine2PBcRDovetail_9368:HG3_PB_SVrefine2Falcon1Dovetail_11863:HG3_Ill_SVrefine2DISCOVARDovetail_13379:HG2_PB_SVrefine2PBcRplusDovetail_6749:HG2_PB_SVrefine2PB10Xhap12_13936:HG2_10X_SVrefine210Xhap12_13303:HG3_10X_allpass_3541:HG2_10X_allpass_2883:HG3_Ill_Spiral_19100:HG2_Ill_Spiral_1212:HG2_PB_pbsv_19078:HG4_PB_assemblyticsfalcon_15797:HG3_PB_pbsv_18768:HG2_PB_assemblyticsPBcR_15607:HG2_Ill_SpiralSDKrefine_10134:HG3_Ill_MetaSV_3135:HG2_Ill_MetaSV_2979:HG3_Ill_Krunchall_24620;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13303:HG2_PB_SVrefine2PB10Xhap12_13936:HG2_PB_SVrefine2PBcRplusDovetail_6749:HG3_Ill_SVrefine2DISCOVARDovetail_13379:HG3_PB_SVrefine2Falcon1Dovetail_11863:HG3_PB_SVrefine2PBcRDovetail_9368:HG3_PB_assemblyticsfalcon_16027:HG4_PB_SVrefine2Falcon1Dovetail_11891;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0977502;ClusterMaxSizeDiff=0.0977502;ClusterMaxEditDist=0.0977502;PBcalls=10;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-614;DistBack=-243;DistForward=-364;DistMin=-364;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=21:24374797-24375411;PctSeqSimilarity=0.9904;PctSizeSimilarity=1;PctRecOverlap=0.9967;SizeDiff=0;StartDistance=2;EndDistance=2;GTMatch=0;TruScore=99;MatchId=2300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:38:69:0|1:33:2:1:46:1|0:0:27:52:0:0/1:55:16:0/1:60:12:.:.:.
chr21	24742232	HG2_PB_SVrefine2PB10Xhap12_13938	TAAAAAAATTATCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG4_PB_HySA_27382:HG4_Ill_Krunchall_25428:HG2_Ill_Krunchall_25086:HG4_Ill_Krunchall_25427:HG2_Ill_Krunchall_25085:HG4_PB_assemblyticsfalcon_15802:HG2_PB_assemblyticsPBcR_15613:HG2_PB_pbsv_19082:HG4_Ill_MetaSV_3084:HG2_Ill_tnscope_1980:HG4_PB_SVrefine2PBcRDovetail_9603:HG4_PB_SVrefine2Falcon1Dovetail_11893:HG4_Ill_scalpel_17105:HG4_Ill_manta_4270:HG4_Ill_GATKHCSBGrefine_12823:HG4_10X_allpass_3395:HG2_PB_SVrefine2PBcRplusDovetail_6751:HG2_PB_SVrefine2PB10Xhap12_13938:HG2_PB_SVrefine2Falcon1plusDovetail_7284:HG2_PB_HySA_34402:HG2_Ill_manta_5033:HG2_Ill_MetaSV_2980:HG2_Ill_GATKHCSBGrefine_12413:HG2_10X_SVrefine210Xhap12_13307:HG4_PB_pbsv_19015:HG2_Ill_breakscan11_2726;NumClusterSVs=26;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13307:HG2_Ill_GATKHCSBGrefine_12413:HG2_Ill_MetaSV_2980:HG2_Ill_manta_5033:HG2_PB_HySA_34402:HG2_PB_SVrefine2Falcon1plusDovetail_7284:HG2_PB_SVrefine2PB10Xhap12_13938:HG2_PB_SVrefine2PBcRplusDovetail_6751:HG4_10X_allpass_3395:HG4_Ill_GATKHCSBGrefine_12823:HG4_Ill_manta_4270:HG4_Ill_scalpel_17105:HG4_PB_SVrefine2Falcon1Dovetail_11893:HG4_PB_SVrefine2PBcRDovetail_9603;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0873786;ClusterMaxSizeDiff=0.0873786;ClusterMaxEditDist=0.0873786;PBcalls=11;Illcalls=13;TenXcalls=2;CGcalls=0;PBexactcalls=6;Illexactcalls=6;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-314;DistBack=19370;DistForward=17874;DistMin=17874;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=21:24742233-24742560;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2301.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:38:0|1:23:1:1:30:0|1:36:0:0:30:0/1:14:29:0/1:17:5:.:.:.
chr21	24828945	HG2_PB_SVrefine2PB10Xhap12_13941	CAAGAAATATAGTGACAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2727:HG2_Ill_GATKHCSBGrefine_12418:HG2_PB_HySA_34409:HG2_PB_pbsv_19085:HG4_Ill_MetaSV_3086:HG2_Ill_tnscope_1981:HG4_Ill_SVrefine2DISCOVARDovetail_13191:HG3_PB_SVrefine2Falcon1Dovetail_11866:HG2_PB_SVrefine2PBcRplusDovetail_6754:HG2_PB_SVrefine2PB10Xhap12_13941:HG2_PB_SVrefine2Falcon1plusDovetail_7287:HG2_Ill_MetaSV_2982:HG2_Ill_GATKHCSBGrefine_12417:HG2_10X_SVrefine210Xhap12_13309:HG4_PB_pbsv_19019;NumClusterSVs=15;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13309:HG2_Ill_GATKHCSBGrefine_12417:HG2_Ill_MetaSV_2982:HG2_PB_SVrefine2Falcon1plusDovetail_7287:HG2_PB_SVrefine2PB10Xhap12_13941:HG2_PB_SVrefine2PBcRplusDovetail_6754:HG3_PB_SVrefine2Falcon1Dovetail_11866:HG4_Ill_SVrefine2DISCOVARDovetail_13191;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0413355;ClusterMaxSizeDiff=0.0413355;ClusterMaxEditDist=0.114833;PBcalls=7;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=3;NumTechs=3;NumTechsExact=3;SVLEN=-319;DistBack=4913;DistForward=-228;DistMin=-228;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=339;REFWIDENED=21:24828946-24829603;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2302.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:36:0|1:34:2:0:32:0|1:37:0:1:22:0/1:21:15:0/1:40:7:.:.:.
chr21	25083440	HG4_Ill_GATKHC_29763	TATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATACAATAAAATAAA	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23312:HG4_PB_pbsv_19022:HG3_PB_pbsv_18773:HG2_PB_pbsv_19088:HG4_PB_HySA_27387:HG2_PB_HySA_34415:HG4_PB_SVrefine2PBcRDovetail_9608:HG4_PB_SVrefine2Falcon1Dovetail_11898:HG4_Ill_svaba_23123:HG4_Ill_SVrefine2DISCOVARDovetail_13193:HG4_Ill_Krunchall_25431:HG4_Ill_GATKHC_29763:HG4_Ill_GATKHCSBGrefine_12825:HG4_Ill_250bpfermikitraw_24402:HG4_Ill_150bpfermikitraw_23470:HG3_PB_SVrefine2Falcon1Dovetail_11869:HG3_PB_HySA_28404:HG3_Ill_svaba_23422:HG3_Ill_manta_4096:HG3_Ill_SVrefine2DISCOVARDovetail_13384:HG3_Ill_Krunchall_24625:HG3_Ill_GATKHC_29709:HG3_Ill_GATKHCSBGrefine_12257:HG3_Ill_250bpfermikitraw_24071:HG3_Ill_150bpfermikitraw_23354:HG2_PB_SVrefine2PBcRplusDovetail_6757:HG2_PB_SVrefine2PB10Xhap12_13944:HG2_PB_SVrefine2Falcon2Bionano_9432:HG2_PB_SVrefine2Falcon1plusDovetail_7290:HG2_Ill_svaba_23190:HG2_Ill_manta_5035:HG2_Ill_SpiralSDKrefine_10140:HG2_Ill_SVrefine2DISCOVARplusDovetail_7803:HG2_Ill_Krunchall_25091:HG2_Ill_GATKHC_29796:HG2_Ill_GATKHCSBGrefine_12419:HG2_Ill_250bpfermikitraw_24763;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23312:HG4_PB_SVrefine2PBcRDovetail_9608:HG4_PB_SVrefine2Falcon1Dovetail_11898:HG4_Ill_svaba_23123:HG4_Ill_SVrefine2DISCOVARDovetail_13193:HG4_Ill_Krunchall_25431:HG4_Ill_GATKHC_29763:HG4_Ill_GATKHCSBGrefine_12825:HG4_Ill_250bpfermikitraw_24402:HG4_Ill_150bpfermikitraw_23470:HG3_PB_SVrefine2Falcon1Dovetail_11869:HG3_PB_HySA_28404:HG3_Ill_svaba_23422:HG3_Ill_manta_4096:HG3_Ill_SVrefine2DISCOVARDovetail_13384:HG3_Ill_Krunchall_24625:HG3_Ill_GATKHC_29709:HG3_Ill_GATKHCSBGrefine_12257:HG3_Ill_250bpfermikitraw_24071:HG3_Ill_150bpfermikitraw_23354:HG2_PB_SVrefine2PBcRplusDovetail_6757:HG2_PB_SVrefine2PB10Xhap12_13944:HG2_PB_SVrefine2Falcon2Bionano_9432:HG2_PB_SVrefine2Falcon1plusDovetail_7290:HG2_Ill_svaba_23190:HG2_Ill_manta_5035:HG2_Ill_SpiralSDKrefine_10140:HG2_Ill_SVrefine2DISCOVARplusDovetail_7803:HG2_Ill_Krunchall_25091:HG2_Ill_GATKHC_29796:HG2_Ill_GATKHCSBGrefine_12419:HG2_Ill_250bpfermikitraw_24763;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0333333;PBcalls=13;Illcalls=24;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=24;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=11;HG4count=11;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=57015;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=21:25083441-25083552;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2303.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:83:1/1:0:32:4:30:1/1:0:8:0:11:1/1:0:26:./.:.:.:.:.:.
chr21	25179970	HG3_Ill_150bpfermikitraw_23356	CCTTGGAGAACCTTTGTGTCCACACTCTGTATCTAGCTAATCTGGTGGGGA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13315:HG4_PB_assemblyticsfalcon_15811:HG2_PB_HySA_34420:HG3_PB_HySA_28405:HG4_PB_pbsv_19025:HG4_Ill_svaba_23126:HG4_Ill_scalpel_17113:HG4_Ill_Krunchall_25436:HG4_Ill_GATKHC_29767:HG4_Ill_GATKHCSBGrefine_12827:HG4_Ill_250bpfermikitraw_24406:HG4_Ill_150bpfermikitraw_23475:HG3_PB_assemblyticsfalcon_16037:HG3_Ill_svaba_23423:HG3_Ill_Krunchall_24627:HG3_Ill_GATKHC_29711:HG3_Ill_GATKHCSBGrefine_12258:HG3_Ill_250bpfermikitraw_24073:HG3_Ill_150bpfermikitraw_23356:HG2_Ill_svaba_23193:HG2_Ill_Krunchall_25094:HG2_Ill_GATKHC_29802:HG2_Ill_GATKHCSBGrefine_12421:HG2_Ill_250bpfermikitraw_24767:HG2_Ill_150bpfermikitraw_23316:HG4_PB_SVrefine2PBcRDovetail_9610:HG4_PB_HySA_27392:HG4_Ill_SVrefine2DISCOVARDovetail_13195:HG2_PB_SVrefine2Falcon2Bionano_9434;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23316:HG2_Ill_250bpfermikitraw_24767:HG2_Ill_GATKHCSBGrefine_12421:HG2_Ill_GATKHC_29802:HG2_Ill_Krunchall_25094:HG2_Ill_svaba_23193:HG3_Ill_150bpfermikitraw_23356:HG3_Ill_250bpfermikitraw_24073:HG3_Ill_GATKHCSBGrefine_12258:HG3_Ill_GATKHC_29711:HG3_Ill_Krunchall_24627:HG3_Ill_svaba_23423:HG3_PB_assemblyticsfalcon_16037:HG4_Ill_150bpfermikitraw_23475:HG4_Ill_250bpfermikitraw_24406:HG4_Ill_GATKHCSBGrefine_12827:HG4_Ill_GATKHC_29767:HG4_Ill_Krunchall_25436:HG4_Ill_scalpel_17113:HG4_Ill_svaba_23126:HG4_PB_pbsv_19025;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0582524;ClusterMaxSizeDiff=0.0582524;ClusterMaxEditDist=0.176471;PBcalls=8;Illcalls=20;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-50;DistBack=1137;DistForward=7134;DistMin=1137;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=102;REFWIDENED=21:25179938-25180089;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2304.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:28:0|1:33:5:2:21:0|1:15:1:0:9:0/1:23:18:./.:.:.:.:.:.
chr21	26344478	HG2_Ill_MetaSV_2986	TGTGAGAGCAGCCAGATATCAAATTTAACAGGAAAGGCTTCATGGTAGCCATTTTAAGTATGTTCACAGATTGAAAGGGAACTTTGTTTAAAAAGTAAAGGAAGTCATGATGACGATGTCCAACACAAGACAAAGTATCAATAAAGAGATAAAAATTATTATGGAAATTCTGGAGCTGATAAACACAAGAACTGAAATGAAAATTATACTAGATGGGCCCAACAGTAGATTTGAATTGGCAGAAGAAGGAATGAGCAAACTTGAAGATAGACTCATTCAGATTATGCAAGCTAAAAAACAGAAAACATAAAAAAGAGAAATAAGGAGCCTCAGGGAAATCTGGGACACCATTAAGTGCATCAACATCCATGTCCATATCCACATCAGACACATCATAGTAAAAATGCTTAAACTTAAAACAAGGAGAAAATCTTGAAAGCAGCAAGAGAAAATTACAACAAAACAAAACTCCTCACTTTCAAGGGAACCTCAATACGATTTAACAGCTGACTTCTCAGCAAAAACAATGTAGGCTGGAAGGCAATAGGATATCATATTTAAAGTGTTCAGTTAAAAAAAAAAAAAAGCAAAACCTGTCAGCCAAAAATCTTATATCAGGTAAATCTATCTTTCCAAAATTAAAGTAAAATAAGAACATTCCTAGATTAACAAAAACTGAGAGAATGTGTTGCTAGCAGACCCACCTTACAATAAACTCTAAAGGAGTTTCTTCAGGCTGACGGGAAATAACCCTAGATAATAATTTGAATACACATAGAAAAATAGGAGCTTCAATAAAGTTAGTTATATGATTCCACAAGGCAGTATAAATCTATATTTTTCTTTTTCTCTTGATTTACAAAGCAGTTGTATAAAATAATATGTTACAATGTATTGTTCGGTCTGTAACACAGAAATGTAATAAATTGGTAATATGTTTGCTAATGACAGCACAAAGGAGGTGGGTGAGAACAAACCTACATTGGGCTAAGGAAATGACTGCAGATGAGTAAGTTAATAATTATAACAAAGTATCATGAGTTTGTAGGTTTGTAATATTAATACATAAATATGTATAATACCAGTATAACAAAAATAGGGGAAAAAGAATAGAGATAATGTCTTAGGCATCTCAGGCTGCAATAACAAAATGCCATGGACTAGGAAGCTTAAAGAGTAAACATCTGGGCCAGGCGCGGTGGCTCAGGCCTGTTATCCCAGCACTTTAGGAGGCCGAAGTGTGTGGATCACGAGGTCAGGAGATTGAGACCCTCCTGGCTAACACG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13324:HG4_PB_pbsv_19032:HG2_Ill_tnscope_1982:HG4_PB_SVrefine2Falcon1Dovetail_11905:HG4_Ill_MetaSV_3092:HG4_10X_allpass_3397:HG2_PB_pbsv_19094:HG2_Ill_SpiralSDKrefine_10153:HG2_Ill_MetaSV_2986:HG2_10X_allpass_2884;NumClusterSVs=10;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13324:HG4_PB_SVrefine2Falcon1Dovetail_11905:HG4_Ill_MetaSV_3092:HG4_10X_allpass_3397:HG2_PB_pbsv_19094:HG2_Ill_SpiralSDKrefine_10153:HG2_Ill_MetaSV_2986:HG2_10X_allpass_2884;NumExactMatchSVs=8;ClusterMaxShiftDist=0.000777303;ClusterMaxSizeDiff=0.000777303;ClusterMaxEditDist=0.001554;PBcalls=3;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-1285;DistBack=2390;DistForward=-973;DistMin=-973;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=21:26344479-26345767;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2305.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:32:./.:27:5:9:15:0|1:82:0:0:22:0/1:66:19:0/1:110:53:.:.:.
chr21	26825131	HG4_Ill_scalpel_17122	TAAAGTGTAGATGCTCTATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2730:HG4_Ill_Krunchall_25448:HG3_Ill_Krunchall_24636:HG2_Ill_Krunchall_25105:HG4_PB_pbsv_19036:HG4_PB_assemblyticsfalcon_15825:HG3_PB_assemblyticsfalcon_16049:HG2_PB_assemblyticsfalcon_16127:HG2_PB_assemblyticsPBcR_15636:HG2_PB_pbsv_19099:HG3_PB_HySA_28419:HG3_PB_pbsv_18784:HG4_PB_HySA_27408:HG4_Ill_MetaSV_3094:HG3_Ill_MetaSV_3139:HG2_PB_HySA_34438:HG2_Ill_tnscope_1983:HG2_Ill_MetaSV_2989:HG4_PB_SVrefine2PBcRDovetail_9619:HG4_PB_SVrefine2Falcon1Dovetail_11909:HG4_Ill_svaba_23137:HG4_Ill_scalpel_17122:HG4_Ill_manta_4277:HG4_Ill_SVrefine2DISCOVARDovetail_13207:HG4_Ill_GATKHCSBGrefine_12836:HG4_10X_allpass_3398:HG3_PB_SVrefine2PBcRDovetail_9377:HG3_PB_SVrefine2Falcon1Dovetail_11877:HG3_Ill_svaba_23433:HG3_Ill_scalpel_17873:HG3_Ill_manta_4099:HG3_Ill_SVrefine2DISCOVARDovetail_13394:HG3_Ill_GATKHCSBGrefine_12265:HG3_10X_allpass_3544:HG2_PB_SVrefine2PBcRplusDovetail_6765:HG2_PB_SVrefine2PB10Xhap12_13951:HG2_PB_SVrefine2Falcon2Bionano_9440:HG2_PB_SVrefine2Falcon1plusDovetail_7296:HG2_Ill_svaba_23208:HG2_Ill_scalpel_17522:HG2_Ill_manta_5041:HG2_Ill_SpiralSDKrefine_10156:HG2_Ill_SVrefine2DISCOVARplusDovetail_7809:HG2_Ill_GATKHCSBGrefine_12429:HG2_10X_allpass_2885:HG2_10X_SVrefine210Xhap12_13330;NumClusterSVs=46;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13330:HG2_10X_allpass_2885:HG2_Ill_GATKHCSBGrefine_12429:HG2_Ill_SVrefine2DISCOVARplusDovetail_7809:HG2_Ill_SpiralSDKrefine_10156:HG2_Ill_manta_5041:HG2_Ill_scalpel_17522:HG2_Ill_svaba_23208:HG2_PB_SVrefine2Falcon1plusDovetail_7296:HG2_PB_SVrefine2Falcon2Bionano_9440:HG2_PB_SVrefine2PB10Xhap12_13951:HG2_PB_SVrefine2PBcRplusDovetail_6765:HG3_10X_allpass_3544:HG3_Ill_GATKHCSBGrefine_12265:HG3_Ill_SVrefine2DISCOVARDovetail_13394:HG3_Ill_manta_4099:HG3_Ill_scalpel_17873:HG3_Ill_svaba_23433:HG3_PB_SVrefine2Falcon1Dovetail_11877:HG3_PB_SVrefine2PBcRDovetail_9377:HG4_10X_allpass_3398:HG4_Ill_GATKHCSBGrefine_12836:HG4_Ill_SVrefine2DISCOVARDovetail_13207:HG4_Ill_manta_4277:HG4_Ill_scalpel_17122:HG4_Ill_svaba_23137:HG4_PB_SVrefine2Falcon1Dovetail_11909:HG4_PB_SVrefine2PBcRDovetail_9619;NumExactMatchSVs=28;ClusterMaxShiftDist=0.114723;ClusterMaxSizeDiff=0.114723;ClusterMaxEditDist=0.114723;PBcalls=18;Illcalls=24;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=16;TenXexactcalls=4;CGexactcalls=0;HG2count=20;HG3count=13;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-267;DistBack=60216;DistForward=2906;DistMin=2906;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=21:26825132-26825413;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2306.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:68:1/1:0:27:2:26:1/1:0:25:0:18:1/1:0:45:./.:.:.:.:.:.
chr21	30045718	HG3_10X_allpass_3547	GGATTTAAATCTACTTTCTCACTCCAAAAATAAACTTCAGATAAATTTATATTCTCAGCAACATTCCAAACTCAAACACTTAGCTCACATATAACCCACATATATGGTCATATGAATATATGACTTGAAAAAGCTACATAAGTGAAAAATGCATAAAATGAATAGTTTCTCTTGCATTATAATCAACAATGTCCTTCAAGGTTTGAGGACAAAACATTCGTTAAAATTAACCACTCAGATAACTCAGATGGTAGTGTCA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7305:HG2_PB_pbsv_19113:HG4_PB_pbsv_19046:HG4_PB_assemblyticsfalcon_15858:HG3_PB_assemblyticsfalcon_16085:HG4_PB_SVrefine2Falcon1Dovetail_11916:HG3_PB_SVrefine2Falcon1Dovetail_11889:HG3_10X_allpass_3547:HG2_PB_SVrefine2Falcon2Bionano_9447;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7305:HG4_PB_SVrefine2Falcon1Dovetail_11916:HG3_PB_SVrefine2Falcon1Dovetail_11889:HG3_10X_allpass_3547:HG2_PB_SVrefine2Falcon2Bionano_9447;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0077821;ClusterMaxSizeDiff=0.00775194;ClusterMaxEditDist=0.0155642;PBcalls=8;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-258;DistBack=52740;DistForward=-258;DistMin=-258;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=260;REFWIDENED=21:30045719-30046236;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2307.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:34:./.:16:14:11:3:./.:9:0:0:3:./.:28:3:./.:.:.:.:.:.
chr21	30263533	HG2_Ill_SVrefine2DISCOVARplusDovetail_7827	CAAGAATGAACTCTAATGTAAGCTATGGATTTGGGGTCATAAATGTGTATAAATGTAGGTTTGTTGATTGTAACAAATGTACCACTCTCTTGTATGAGGCTGATAGTCGGGGAGGCTATGTGTGTGTGTCAGGGGGTGCAGAGTATAGATGGGAACACCCTCTACTTTGTACTCAATTTTGCTGTGAACCTAAAACTTCTCTGAAAGATAAATTTTATTTTGAAAAACACTATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCGCGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTATTCCCAGCTACTCGGGAGGCTGAGGCAGGAAAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_11917:HG2_PB_SVrefine2PBcRplusDovetail_6774:HG4_PB_pbsv_19048:HG3_PB_pbsv_18800:HG2_PB_SVrefine2PBcRplusDovetail_6773:HG4_Ill_GATKHCSBGrefine_12844:HG3_Ill_GATKHCSBGrefine_12269:HG2_Ill_GATKHCSBGrefine_12437:HG4_Ill_MetaSV_3097:HG3_Ill_MetaSV_3146:HG2_PB_pbsv_19115:HG4_Ill_SVrefine2DISCOVARDovetail_13219:HG3_PB_SVrefine2PBcRDovetail_9389:HG3_Ill_SVrefine2DISCOVARDovetail_13409:HG3_10X_allpass_3548:HG2_PB_assemblyticsPBcR_15674:HG2_PB_SVrefine2PBcRplusDovetail_6772:HG2_PB_SVrefine2PB10Xhap12_13962:HG2_PB_SVrefine2Falcon1plusDovetail_7306:HG2_Ill_SVrefine2DISCOVARplusDovetail_7827:HG2_10X_SVrefine210Xhap12_13340:HG3_PB_SVrefine2Falcon1Dovetail_11890;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13340:HG2_Ill_SVrefine2DISCOVARplusDovetail_7827:HG2_PB_SVrefine2Falcon1plusDovetail_7306:HG2_PB_SVrefine2PB10Xhap12_13962:HG2_PB_SVrefine2PBcRplusDovetail_6772:HG2_PB_assemblyticsPBcR_15674:HG3_10X_allpass_3548:HG3_Ill_SVrefine2DISCOVARDovetail_13409:HG3_PB_SVrefine2PBcRDovetail_9389:HG4_Ill_SVrefine2DISCOVARDovetail_13219;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0145191;ClusterMaxSizeDiff=0.0145191;ClusterMaxEditDist=0.0834846;PBcalls=12;Illcalls=8;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=2;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-549;DistBack=13951;DistForward=-414;DistMin=-414;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=233;REFWIDENED=21:30263534-30264315;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2308.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:40:30:0|1:29:0:3:27:1|0:0:9:22:0:0/1:23:9:0/1:35:6:.:.:.
chr21	30552224	HG3_PB_SVrefine2Falcon1Dovetail_11893	ATGTTTTTTGCTAGAATAGCATGTTTTTTAAGAGTTTTCTGGCTGGGTACAGTGGCTCACACCTGTAATCCCAGCACTTCATGAGGCCAAGGTGGGCGGATCACCTGAGGTCAGGAGTTCGAGAACAGCCTGGCCAATGTGGTGAAACCTCATCTCTACTAAAAAAAAAAAAAAAAAAAAATGTAGCAGGGCATGGTGGCGTGCCTGTAATCCCAGCTACTTGGGAGACTGAGATGGGAGAATCACTTGAACCCAGAAGGTGGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGTGCGACAGAGTGAGACTCAGTCTCAAAAAAAAAAAAGAGTTTTCTAAG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6777:HG2_PB_SVrefine2PB10Xhap12_13966:HG2_PB_PB10Xdip_18854:HG4_PB_pbsv_19051:HG4_Ill_Krunchall_25482:HG3_Ill_Krunchall_24674:HG4_Ill_MetaSV_3099:HG3_PB_HySA_28461:HG3_Ill_MetaSV_3148:HG2_Ill_tnscope_1988:HG4_PB_assemblyticsfalcon_15863:HG4_PB_SVrefine2PBcRDovetail_9628:HG4_PB_SVrefine2Falcon1Dovetail_11920:HG4_Ill_SVrefine2DISCOVARDovetail_13221:HG4_Ill_GATKHCSBGrefine_12847:HG4_10X_allpass_3400:HG3_PB_pbsv_18805:HG3_PB_assemblyticsfalcon_16090:HG3_PB_SVrefine2PBcRDovetail_9393:HG3_PB_SVrefine2Falcon1Dovetail_11893:HG3_Ill_scalpel_17898:HG3_Ill_manta_4105:HG3_Ill_SVrefine2DISCOVARDovetail_13413:HG3_Ill_GATKHCSBGrefine_12272:HG2_PB_pbsv_19119:HG2_PB_assemblyticsfalcon_16167:HG2_PB_SVrefine2PB10Xhap12_13965:HG2_PB_SVrefine2Falcon2Bionano_9450:HG2_PB_SVrefine2Falcon1plusDovetail_7309:HG2_Ill_manta_5046:HG2_Ill_SpiralSDKrefine_10175:HG2_Ill_SVrefine2DISCOVARplusDovetail_7830:HG2_Ill_MetaSV_2995:HG2_Ill_GATKHCSBGrefine_12439:HG2_10X_allpass_2887:HG2_10X_SVrefine210Xhap12_13345:HG2_PB_HySA_34485:HG2_PB_assemblyticsPBcR_15678;NumClusterSVs=38;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13345:HG2_10X_allpass_2887:HG2_Ill_GATKHCSBGrefine_12439:HG2_Ill_MetaSV_2995:HG2_Ill_SVrefine2DISCOVARplusDovetail_7830:HG2_Ill_SpiralSDKrefine_10175:HG2_Ill_manta_5046:HG2_PB_SVrefine2Falcon1plusDovetail_7309:HG2_PB_SVrefine2Falcon2Bionano_9450:HG2_PB_SVrefine2PB10Xhap12_13965:HG2_PB_assemblyticsfalcon_16167:HG2_PB_pbsv_19119:HG3_Ill_GATKHCSBGrefine_12272:HG3_Ill_SVrefine2DISCOVARDovetail_13413:HG3_Ill_manta_4105:HG3_Ill_scalpel_17898:HG3_PB_SVrefine2Falcon1Dovetail_11893:HG3_PB_SVrefine2PBcRDovetail_9393:HG3_PB_assemblyticsfalcon_16090:HG3_PB_pbsv_18805:HG4_10X_allpass_3400:HG4_Ill_GATKHCSBGrefine_12847:HG4_Ill_SVrefine2DISCOVARDovetail_13221:HG4_PB_SVrefine2Falcon1Dovetail_11920:HG4_PB_SVrefine2PBcRDovetail_9628:HG4_PB_assemblyticsfalcon_15863;NumExactMatchSVs=26;ClusterMaxShiftDist=0.143046;ClusterMaxSizeDiff=0.143046;ClusterMaxEditDist=0.143046;PBcalls=19;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=12;Illexactcalls=11;TenXexactcalls=3;CGexactcalls=0;HG2count=18;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-354;DistBack=-353;DistForward=49237;DistMin=-353;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=21:30552225-30552579;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2309.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:32:0|1:23:0:2:30:1|0:0:22:45:0:0/1:40:13:0/1:36:12:.:.:.
chr21	30601816	HG3_Ill_SVrefine2DISCOVARDovetail_13414	ACCGGCTATTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGG	A	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2731:HG4_Ill_Krunchall_25483:HG3_Ill_Krunchall_24675:HG2_Ill_Krunchall_25138:HG2_PB_assemblyticsfalcon_16168:HG4_PB_assemblyticsfalcon_15864:HG3_PB_HySA_28462:HG4_Ill_Spiral_1447:HG2_PB_pbsv_19120:HG4_PB_SVrefine2PBcRDovetail_9629:HG4_Ill_MetaSV_3100:HG3_Ill_MetaSV_3149:HG2_Ill_tnscope_1989:HG2_Ill_MetaSV_2996:HG4_PB_pbsv_19052:HG4_PB_SVrefine2Falcon1Dovetail_11921:HG4_Ill_SVrefine2DISCOVARDovetail_13222:HG4_Ill_GATKHCSBGrefine_12848:HG4_10X_allpass_3401:HG3_PB_pbsv_18806:HG3_PB_SVrefine2PBcRDovetail_9394:HG3_PB_SVrefine2Falcon1Dovetail_11894:HG3_Ill_scalpel_17899:HG3_Ill_SVrefine2DISCOVARDovetail_13414:HG3_Ill_GATKHCSBGrefine_12273:HG2_PB_SVrefine2Falcon2Bionano_9451:HG2_PB_SVrefine2Falcon1plusDovetail_7310:HG2_Ill_manta_5047:HG2_Ill_GATKHCSBGrefine_12440:HG2_10X_allpass_2888:HG2_10X_SVrefine210Xhap12_13346;NumClusterSVs=31;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13346:HG2_10X_allpass_2888:HG2_Ill_GATKHCSBGrefine_12440:HG2_Ill_manta_5047:HG2_PB_SVrefine2Falcon1plusDovetail_7310:HG2_PB_SVrefine2Falcon2Bionano_9451:HG3_Ill_GATKHCSBGrefine_12273:HG3_Ill_SVrefine2DISCOVARDovetail_13414:HG3_Ill_scalpel_17899:HG3_PB_SVrefine2Falcon1Dovetail_11894:HG3_PB_SVrefine2PBcRDovetail_9394:HG3_PB_pbsv_18806:HG4_10X_allpass_3401:HG4_Ill_GATKHCSBGrefine_12848:HG4_Ill_SVrefine2DISCOVARDovetail_13222:HG4_PB_SVrefine2Falcon1Dovetail_11921:HG4_PB_pbsv_19052;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0533333;ClusterMaxSizeDiff=0.0533333;ClusterMaxEditDist=0.0533333;PBcalls=12;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=7;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-340;DistBack=49237;DistForward=-328;DistMin=-328;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=21:30601817-30602165;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2310.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:32:0|1:27:4:2:22:1|0:0:19:40:0:0/1:23:16:0/1:31:17:.:.:.
chr21	32916623	HG3_PB_SVrefine2Falcon1Dovetail_11900	CAGGATGAAAAGCCCATTTCTTTCTCAAAAGGGCCACGATCCCTCTTGCTGTCCCAGACCACCAGAGCTAACATTTGGTTCCGGTGAAATGGAAACCTCGAAATGACGA	C	20	PASS	ClusterIDs=HG4_PB_pbsv_19061:HG4_PB_HySA_27452:HG3_PB_HySA_28486:HG3_PB_pbsv_18813:HG4_PB_assemblyticsfalcon_15877:HG3_PB_assemblyticsfalcon_16102:HG2_PB_assemblyticsfalcon_16184:HG2_PB_assemblyticsPBcR_15695:HG3_Ill_Krunchall_24692:HG2_Ill_Krunchall_25156:HG2_PB_HySA_34504:HG3_Ill_MetaSV_3151:HG4_PB_SVrefine2Falcon1Dovetail_11926:HG4_Ill_svaba_23176:HG4_Ill_manta_4282:HG4_Ill_MetaSV_3102:HG4_Ill_GATKHCSBGrefine_12855:HG4_CG_vcfBeta_11744:HG4_10X_allpass_3402:HG3_PB_SVrefine2PBcRDovetail_9400:HG3_PB_SVrefine2Falcon1Dovetail_11900:HG3_Ill_svaba_23478:HG3_Ill_scalpel_17913:HG3_Ill_manta_4106:HG3_Ill_SVrefine2DISCOVARDovetail_13421:HG3_Ill_GATKHCSBGrefine_12277:HG3_Ill_250bpfermikitraw_24129:HG3_Ill_150bpfermikitraw_23417:HG3_CG_vcfBeta_10107:HG2_PB_pbsv_19128:HG2_PB_SVrefine2PBcRplusDovetail_6784:HG2_PB_SVrefine2PB10Xhap12_13974:HG2_PB_SVrefine2Falcon2Bionano_9456:HG2_PB_SVrefine2Falcon1plusDovetail_7316:HG2_Ill_svaba_23252:HG2_Ill_scalpel_17558:HG2_Ill_manta_5050:HG2_Ill_SVrefine2DISCOVARplusDovetail_7838:HG2_Ill_GATKHC_29872:HG2_Ill_GATKHCSBGrefine_12444:HG2_Ill_250bpfermikitraw_24829:HG2_Ill_150bpfermikitraw_23368:HG2_10X_allpass_2890:HG2_10X_SVrefine210Xhap12_13355;NumClusterSVs=44;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13355:HG2_10X_allpass_2890:HG2_Ill_150bpfermikitraw_23368:HG2_Ill_250bpfermikitraw_24829:HG2_Ill_GATKHCSBGrefine_12444:HG2_Ill_GATKHC_29872:HG2_Ill_SVrefine2DISCOVARplusDovetail_7838:HG2_Ill_manta_5050:HG2_Ill_scalpel_17558:HG2_Ill_svaba_23252:HG2_PB_SVrefine2Falcon1plusDovetail_7316:HG2_PB_SVrefine2Falcon2Bionano_9456:HG2_PB_SVrefine2PB10Xhap12_13974:HG2_PB_SVrefine2PBcRplusDovetail_6784:HG2_PB_pbsv_19128:HG3_CG_vcfBeta_10107:HG3_Ill_150bpfermikitraw_23417:HG3_Ill_250bpfermikitraw_24129:HG3_Ill_GATKHCSBGrefine_12277:HG3_Ill_SVrefine2DISCOVARDovetail_13421:HG3_Ill_manta_4106:HG3_Ill_scalpel_17913:HG3_Ill_svaba_23478:HG3_PB_SVrefine2Falcon1Dovetail_11900:HG3_PB_SVrefine2PBcRDovetail_9400:HG4_10X_allpass_3402:HG4_CG_vcfBeta_11744:HG4_Ill_GATKHCSBGrefine_12855:HG4_Ill_MetaSV_3102:HG4_Ill_manta_4282:HG4_Ill_svaba_23176:HG4_PB_SVrefine2Falcon1Dovetail_11926;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0648148;ClusterMaxSizeDiff=0.0648148;ClusterMaxEditDist=0.0648148;PBcalls=17;Illcalls=22;TenXcalls=3;CGcalls=2;PBexactcalls=8;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=2;HG2count=19;HG3count=15;HG4count=10;NumTechs=4;NumTechsExact=4;SVLEN=-108;DistBack=-291;DistForward=19724;DistMin=-291;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=21:32916624-32916735;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2311.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:47:./.:0:0:0:0:./.:0:9:0:3:1/1:0:27:./.:.:.:.:.:.
chr21	34144186	HG2_Ill_GATKHCSBGrefine_12451	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGC	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9406:HG4_Ill_Krunchall_25511:HG4_Ill_GATKHC_29852:HG4_Ill_GATKHCSBGrefine_12861:HG4_Ill_250bpfermikitraw_24478:HG4_Ill_150bpfermikitraw_23547:HG2_Ill_GATKHC_29892:HG2_Ill_GATKHCSBGrefine_12452:HG2_Ill_250bpfermikitraw_24849:HG2_Ill_150bpfermikitraw_23386:HG4_Ill_svaba_23190:HG4_Ill_Krunchall_25510:HG4_Ill_GATKHC_29851:HG4_Ill_GATKHCSBGrefine_12860:HG4_Ill_250bpfermikitraw_24477:HG4_Ill_150bpfermikitraw_23546:HG3_Ill_svaba_23498:HG3_Ill_Krunchall_24711:HG3_Ill_GATKHC_29802:HG3_Ill_GATKHCSBGrefine_12283:HG3_Ill_250bpfermikitraw_24150:HG3_Ill_150bpfermikitraw_23438:HG2_Ill_svaba_23268:HG2_Ill_Krunchall_25172:HG2_Ill_GATKHC_29891:HG2_Ill_GATKHCSBGrefine_12451:HG2_Ill_250bpfermikitraw_24848:HG2_Ill_150bpfermikitraw_23385:HG3_PB_pbsv_18822:HG2_PB_assemblyticsfalcon_16202:HG2_PB_pbsv_19138:HG4_PB_pbsv_19070:HG4_Ill_SVrefine2DISCOVARDovetail_13236:HG2_Ill_SVrefine2DISCOVARplusDovetail_7851:HG2_PB_SVrefine2PBcRplusDovetail_6791:HG2_PB_SVrefine2PB10Xhap12_13984:HG2_PB_SVrefine2Falcon2Bionano_9461:HG4_PB_SVrefine2PBcRDovetail_9641;NumClusterSVs=38;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23385:HG2_Ill_250bpfermikitraw_24848:HG2_Ill_GATKHCSBGrefine_12451:HG2_Ill_GATKHC_29891:HG2_Ill_Krunchall_25172:HG2_Ill_svaba_23268:HG3_Ill_150bpfermikitraw_23438:HG3_Ill_250bpfermikitraw_24150:HG3_Ill_GATKHCSBGrefine_12283:HG3_Ill_GATKHC_29802:HG3_Ill_Krunchall_24711:HG3_Ill_svaba_23498:HG4_Ill_150bpfermikitraw_23546:HG4_Ill_250bpfermikitraw_24477:HG4_Ill_GATKHCSBGrefine_12860:HG4_Ill_GATKHC_29851:HG4_Ill_Krunchall_25510:HG4_Ill_svaba_23190;NumExactMatchSVs=18;ClusterMaxShiftDist=0.158273;ClusterMaxSizeDiff=0.158273;ClusterMaxEditDist=0.172662;PBcalls=9;Illcalls=29;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=18;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=8;HG4count=14;NumTechs=2;NumTechsExact=1;SVLEN=-74;DistBack=-13;DistForward=-63;DistMin=-63;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=73;REFWIDENED=21:34144155-34144301;PctSeqSimilarity=0.9583;PctSizeSimilarity=0.9189;PctRecOverlap=0.92;SizeDiff=6;StartDistance=-6;EndDistance=0;GTMatch=0;TruScore=93;MatchId=2312.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:53:./.:0:0:0:1:./.:0:1:1:1:./.:3:27:./.:.:.:.:.:.
chr21	37014963	HG4_10X_allpass_3405	ACATCATCAGATTAAATATTAACATATTAATGAAAAGACTTCATTTCTCTGAACCAAAGAAAACGAAAACAATGATGAAGAATGCATTAATGAGGGTTTTAAGCATAAATGACAGAAATTTTAATGCCACTTCCAAATATGCTAACTTACTTAAAATTAGAATAAAATGTATCAATACTTACAGATTATCAGAGTCACCTTCTATC	A	20	PASS	ClusterIDs=HG2_PB_HySA_34561:HG4_PB_HySA_27492:HG3_PB_HySA_28520:HG3_Ill_MetaSV_3156:HG4_PB_pbsv_19086:HG4_PB_SVrefine2PBcRDovetail_9652:HG4_Ill_svaba_23219:HG4_Ill_manta_4290:HG4_Ill_MetaSV_3108:HG4_Ill_GATKHCSBGrefine_12880:HG4_Ill_Cortex_2165:HG4_10X_allpass_3405:HG3_PB_assemblyticsfalcon_16145:HG3_PB_SVrefine2PBcRDovetail_9416:HG3_PB_SVrefine2Falcon1Dovetail_11920:HG3_Ill_svaba_23530:HG3_Ill_scalpel_17946:HG3_Ill_manta_4114:HG3_Ill_SVrefine2DISCOVARDovetail_13446:HG3_Ill_GATKHCSBGrefine_12302:HG3_Ill_Cortex_2201:HG3_10X_allpass_3553:HG2_PB_pbsv_19154:HG2_PB_assemblyticsfalcon_16229:HG2_PB_assemblyticsPBcR_15735:HG2_PB_SVrefine2PBcRplusDovetail_6803:HG2_PB_SVrefine2PB10Xhap12_13998:HG2_PB_SVrefine2Falcon1plusDovetail_7333:HG2_Ill_svaba_23300:HG2_Ill_scalpel_17589:HG2_Ill_manta_5058:HG2_Ill_breakscan11_2734:HG2_Ill_SpiralSDKrefine_10211:HG2_Ill_MetaSV_3004:HG2_Ill_GATKHCSBGrefine_12467:HG2_Ill_Cortex_5140:HG2_10X_SVrefine210Xhap12_13381:HG4_Ill_Krunchall_25536:HG3_PB_pbsv_18840:HG3_Ill_Krunchall_24734:HG2_Ill_Krunchall_25200;NumClusterSVs=41;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13381:HG2_Ill_Cortex_5140:HG2_Ill_GATKHCSBGrefine_12467:HG2_Ill_MetaSV_3004:HG2_Ill_SpiralSDKrefine_10211:HG2_Ill_breakscan11_2734:HG2_Ill_manta_5058:HG2_Ill_scalpel_17589:HG2_Ill_svaba_23300:HG2_PB_SVrefine2Falcon1plusDovetail_7333:HG2_PB_SVrefine2PB10Xhap12_13998:HG2_PB_SVrefine2PBcRplusDovetail_6803:HG2_PB_assemblyticsPBcR_15735:HG2_PB_assemblyticsfalcon_16229:HG2_PB_pbsv_19154:HG3_10X_allpass_3553:HG3_Ill_Cortex_2201:HG3_Ill_GATKHCSBGrefine_12302:HG3_Ill_SVrefine2DISCOVARDovetail_13446:HG3_Ill_manta_4114:HG3_Ill_scalpel_17946:HG3_Ill_svaba_23530:HG3_PB_SVrefine2Falcon1Dovetail_11920:HG3_PB_SVrefine2PBcRDovetail_9416:HG3_PB_assemblyticsfalcon_16145:HG4_10X_allpass_3405:HG4_Ill_Cortex_2165:HG4_Ill_GATKHCSBGrefine_12880:HG4_Ill_MetaSV_3108:HG4_Ill_manta_4290:HG4_Ill_svaba_23219:HG4_PB_SVrefine2PBcRDovetail_9652:HG4_PB_pbsv_19086;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0382775;ClusterMaxSizeDiff=0.0382775;ClusterMaxEditDist=0.0382775;PBcalls=15;Illcalls=23;TenXcalls=3;CGcalls=0;PBexactcalls=11;Illexactcalls=19;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=14;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-205;DistBack=-77;DistForward=-122;DistMin=-122;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=21:37014964-37015169;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2313.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:0|1:23:1:1:28:0|1:37:0:0:25:0/1:50:14:./.:.:.:.:.:.
chr21	37516620	HG3_Ill_SVrefine2DISCOVARDovetail_13449	GGTGGCACACACCTTCATCCCAGCTACTTGGGAGGCTGAAGCAGTAGAATCACTTGATCCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATTGTGCCACTGCACTGCAGCCTAGGCAACAAAACAAGACTGTCTCACAAAACAAAATAAAAAATTTTTAGGCCGGGTGTA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7866:HG3_PB_HySA_28527:HG2_PB_HySA_34567:HG3_PB_pbsv_18845:HG4_PB_pbsv_19088:HG2_PB_pbsv_19156:HG2_Ill_150bpfermikitraw_23420:HG2_10X_SVrefine210Xhap12_13384:HG3_PB_SVrefine2Falcon1Dovetail_11923:HG2_PB_SVrefine2Falcon1plusDovetail_7335:HG4_PB_SVrefine2Falcon1Dovetail_11948:HG3_PB_SVrefine2PBcRDovetail_9418:HG3_Ill_SVrefine2DISCOVARDovetail_13449:HG2_PB_SVrefine2PBcRplusDovetail_6804:HG2_PB_SVrefine2PB10Xhap12_13999:HG2_PB_SVrefine2Falcon2Bionano_9474;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7866:HG4_PB_SVrefine2Falcon1Dovetail_11948:HG3_PB_SVrefine2PBcRDovetail_9418:HG3_Ill_SVrefine2DISCOVARDovetail_13449:HG2_PB_SVrefine2PBcRplusDovetail_6804:HG2_PB_SVrefine2PB10Xhap12_13999:HG2_PB_SVrefine2Falcon2Bionano_9474;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0233918;ClusterMaxSizeDiff=0.0233918;ClusterMaxEditDist=0.0828402;PBcalls=12;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-168;DistBack=1;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=378;REFWIDENED=21:37516621-37517166;PctSeqSimilarity=0.9666;PctSizeSimilarity=0.9825;PctRecOverlap=0.0407;SizeDiff=-3;StartDistance=-162;EndDistance=-165;GTMatch=0;TruScore=66;MatchId=2315.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:47:1/1:3:17:1:13:0/0:25:0:25:0:0/0:45:0:./.:.:.:.:.:.
chr21	37588017	HG3_Ill_SVrefine2DISCOVARDovetail_13450	AAAAAGAAATTTGCGACCAGGCACGGTGGCTCACACCTGTGATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCATGAGGTCAGGAGTTCAGGACCAGCCTGGCCAAGATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCCACTCGGGAGGCTGAGGCAAGAGAATCGCTTGAACCAGGGAGGTGGAGGTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGCGACAGAGCAAGACTCCATCTCAAAAAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13385:HG4_PB_HySA_27501:HG2_PB_HySA_34570:HG2_PB_pbsv_19157:HG3_PB_pbsv_18846:HG3_PB_HySA_28529:HG4_PB_pbsv_19089:HG4_PB_SVrefine2PBcRDovetail_9654:HG4_PB_SVrefine2Falcon1Dovetail_11949:HG4_Ill_SVrefine2DISCOVARDovetail_13252:HG3_PB_SVrefine2PBcRDovetail_9419:HG3_PB_SVrefine2Falcon1Dovetail_11924:HG3_Ill_SVrefine2DISCOVARDovetail_13450:HG2_PB_SVrefine2PBcRplusDovetail_6805:HG2_PB_SVrefine2PB10Xhap12_14000:HG2_PB_SVrefine2Falcon2Bionano_9475:HG2_PB_SVrefine2Falcon1plusDovetail_7336:HG2_Ill_SVrefine2DISCOVARplusDovetail_7867;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13385:HG4_PB_SVrefine2PBcRDovetail_9654:HG4_PB_SVrefine2Falcon1Dovetail_11949:HG4_Ill_SVrefine2DISCOVARDovetail_13252:HG3_PB_SVrefine2PBcRDovetail_9419:HG3_PB_SVrefine2Falcon1Dovetail_11924:HG3_Ill_SVrefine2DISCOVARDovetail_13450:HG2_PB_SVrefine2PBcRplusDovetail_6805:HG2_PB_SVrefine2PB10Xhap12_14000:HG2_PB_SVrefine2Falcon2Bionano_9475:HG2_PB_SVrefine2Falcon1plusDovetail_7336:HG2_Ill_SVrefine2DISCOVARplusDovetail_7867;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0134228;ClusterMaxSizeDiff=0.0134228;ClusterMaxEditDist=0.0336134;PBcalls=14;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-298;DistBack=39621;DistForward=-143;DistMin=-143;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=610;REFWIDENED=21:37588018-37588925;PctSeqSimilarity=0.9435;PctSizeSimilarity=1;PctRecOverlap=0.796;SizeDiff=0;StartDistance=-61;EndDistance=-61;GTMatch=0;TruScore=91;MatchId=2316.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:71:1/1:1:25:0:16:0/0:19:0:6:0:0/0:38:0:./.:.:.:.:.:.
chr21	37857255	HG2_PB_pbsv_19158	CTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTACTGGGCTGATAAGGGCCAATTCTAATGGGCTCATCTTAACTTGATGACATCCACAAAGTCTCTGTTTCCAAATAAGGTCACATTCACAGGCACCAGAAGGTAGGGCTTCAATATGCATTTTGGGGGACAGACTTCACCCACTGACAGCCATATGTGTTCTTTACAGTTGCCACTATTTCTATGACTTGGAGTGAGACTGTGATTTTGTTTTTCTTTTTTTTTTGATGGCGTCTTAGTCTGTCACCTAGTCTGGAGTGCAGTGGCGTGATTTTTGGCTCACTGCACTCTTTGCCTCCCAGGTTCAAGCGATTCTCT	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_1990:HG2_10X_allpass_2893:HG4_PB_SVrefine2PBcRDovetail_9655:HG4_10X_allpass_3408:HG2_PB_assemblyticsPBcR_15745:HG3_PB_assemblyticsfalcon_16157:HG2_PB_SVrefine2PB10Xhap12_14002:HG4_PB_pbsv_19091:HG4_Ill_Krunchall_25546:HG2_Ill_Krunchall_25211:HG2_PB_SVrefine2PBcRplusDovetail_6806:HG4_Ill_MetaSV_3111:HG2_Ill_MetaSV_3005:HG4_Ill_SVrefine2DISCOVARDovetail_13256:HG4_Ill_GATKHCSBGrefine_12884:HG3_PB_SVrefine2Falcon1Dovetail_11925:HG2_PB_pbsv_19158:HG2_PB_SVrefine2PB10Xhap12_14001:HG2_PB_SVrefine2Falcon2Bionano_9477:HG2_Ill_manta_5059:HG2_Ill_SVrefine2DISCOVARplusDovetail_7869:HG2_Ill_GATKHCSBGrefine_12468;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12468:HG2_Ill_SVrefine2DISCOVARplusDovetail_7869:HG2_Ill_manta_5059:HG2_PB_SVrefine2Falcon2Bionano_9477:HG2_PB_SVrefine2PB10Xhap12_14001:HG2_PB_pbsv_19158:HG3_PB_SVrefine2Falcon1Dovetail_11925:HG4_Ill_GATKHCSBGrefine_12884:HG4_Ill_SVrefine2DISCOVARDovetail_13256;NumExactMatchSVs=9;ClusterMaxShiftDist=0.214379;ClusterMaxSizeDiff=0.214379;ClusterMaxEditDist=0.214379;PBcalls=10;Illcalls=10;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-362;DistBack=43099;DistForward=-356;DistMin=-356;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=21:37857256-37857654;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2317.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:25:./.:11:23:24:0:1|0:0:20:61:0:0/1:56:23:0/1:30:5:.:.:.
chr21	38961700	HG3_Ill_SVrefine2DISCOVARDovetail_13456	TAAAAGGCCATGCTGTTGGGAGGCCGAGGCGGGCGGATCACAAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCAGTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13389:HG4_PB_assemblyticsfalcon_15937:HG4_PB_SVrefine2Falcon1Dovetail_11951:HG3_PB_SVrefine2Falcon1Dovetail_11927:HG3_PB_assemblyticsfalcon_16164:HG2_PB_assemblyticsPBcR_15751:HG2_PB_PB10Xdip_18915:HG2_PB_SVrefine2PB10Xhap12_14004:HG4_PB_HySA_27506:HG2_PB_pbsv_19161:HG3_PB_pbsv_18848:HG3_PB_HySA_28534:HG3_Ill_MetaSV_3157:HG2_PB_HySA_34576:HG4_PB_pbsv_19093:HG4_PB_SVrefine2PBcRDovetail_9657:HG4_Ill_SVrefine2DISCOVARDovetail_13264:HG4_Ill_GATKHCSBGrefine_12888:HG3_PB_SVrefine2PBcRDovetail_9420:HG3_Ill_SVrefine2DISCOVARDovetail_13456:HG3_Ill_GATKHCSBGrefine_12307:HG2_PB_SVrefine2PBcRplusDovetail_6808:HG2_PB_SVrefine2PB10Xhap12_14003:HG2_Ill_SVrefine2DISCOVARplusDovetail_7873:HG2_Ill_GATKHCSBGrefine_12473;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13389:HG4_PB_pbsv_19093:HG4_PB_SVrefine2PBcRDovetail_9657:HG4_Ill_SVrefine2DISCOVARDovetail_13264:HG4_Ill_GATKHCSBGrefine_12888:HG3_PB_SVrefine2PBcRDovetail_9420:HG3_Ill_SVrefine2DISCOVARDovetail_13456:HG3_Ill_GATKHCSBGrefine_12307:HG2_PB_SVrefine2PBcRplusDovetail_6808:HG2_PB_SVrefine2PB10Xhap12_14003:HG2_Ill_SVrefine2DISCOVARplusDovetail_7873:HG2_Ill_GATKHCSBGrefine_12473;NumExactMatchSVs=12;ClusterMaxShiftDist=0.277228;ClusterMaxSizeDiff=0.277228;ClusterMaxEditDist=0.277228;PBcalls=17;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-282;DistBack=32483;DistForward=-47;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=15;REFWIDENED=21:38961701-38961997;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2318.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:35:./.:8:12:11:11:0|1:25:0:0:8:0/1:18:18:./.:.:.:.:.:.
chr21	39481194	HG4_PB_HySA_27525	TTCTAGAACAGTAGGAATTTTGCTAATGTTTAGTAAGGCCTCATGATCAGATTTGGCCCACACCAGGGAGAGAAACCGGAGATGTTTTTGTTGGTCACTCAGGGCTGGTATGGGCGCAAAAGATTATATAACTTGAGAAGCACAGACTTAATAGGTGTTTTCCCCAAGAAATTCTCTGTGTGCTGGAGATGAACATGGAGGACTCGAGAGCTAGGCTAAGGGTTCCTAAAAGACAGAGTAAAATCTGCTTTATTCTCCAAGTGCTTGAGAGACTGTATTTCCCCAGAGGGACTGGGCCTACCAACTAGTCCTCCAAGATGTTTGCCACATTTAAAGCTGCAGGATATGGGAGCTAAAGATCCAAGCTCAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13395:HG2_PB_HySA_34599:HG4_PB_pbsv_19104:HG3_PB_pbsv_18857:HG2_PB_pbsv_19172:HG4_PB_SVrefine2PBcRDovetail_9664:HG4_PB_SVrefine2Falcon1Dovetail_11958:HG4_PB_HySA_27525:HG4_Ill_SVrefine2DISCOVARDovetail_13270:HG4_Ill_MetaSV_3117:HG3_PB_SVrefine2PBcRDovetail_9426:HG3_PB_SVrefine2Falcon1Dovetail_11934:HG3_PB_HySA_28546:HG3_Ill_SVrefine2DISCOVARDovetail_13461:HG3_Ill_MetaSV_3160:HG2_PB_SVrefine2PBcRplusDovetail_6815:HG2_PB_SVrefine2PB10Xhap12_14011:HG2_PB_SVrefine2Falcon2Bionano_9484:HG2_PB_SVrefine2Falcon1plusDovetail_7344:HG2_Ill_SVrefine2DISCOVARplusDovetail_7878;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13395:HG4_PB_SVrefine2PBcRDovetail_9664:HG4_PB_SVrefine2Falcon1Dovetail_11958:HG4_PB_HySA_27525:HG4_Ill_SVrefine2DISCOVARDovetail_13270:HG4_Ill_MetaSV_3117:HG3_PB_SVrefine2PBcRDovetail_9426:HG3_PB_SVrefine2Falcon1Dovetail_11934:HG3_PB_HySA_28546:HG3_Ill_SVrefine2DISCOVARDovetail_13461:HG3_Ill_MetaSV_3160:HG2_PB_SVrefine2PBcRplusDovetail_6815:HG2_PB_SVrefine2PB10Xhap12_14011:HG2_PB_SVrefine2Falcon2Bionano_9484:HG2_PB_SVrefine2Falcon1plusDovetail_7344:HG2_Ill_SVrefine2DISCOVARplusDovetail_7878;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0108108;ClusterMaxSizeDiff=0.0108108;ClusterMaxEditDist=0.0163043;PBcalls=14;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=10;Illexactcalls=5;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-370;DistBack=0;DistForward=-229;DistMin=-229;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=376;REFWIDENED=21:39481195-39481940;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2319.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:71:1/1:2:29:4:36:./.:0:0:0:1:./.:0:6:./.:2:3:.:.:.
chr21	39590526	HG2_PB_SVrefine2PB10Xhap12_14012	TCACCTGGGCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	T	20	PASS	ClusterIDs=HG2_Ill_Krunchall_25227:HG4_Ill_Krunchall_25567:HG4_PB_assemblyticsfalcon_15951:HG2_PB_assemblyticsPBcR_15765:HG3_PB_assemblyticsfalcon_16179:HG2_Ill_Krunchall_25228:HG4_PB_pbsv_19106:HG4_PB_HySA_27528:HG2_PB_HySA_34601:HG2_PB_pbsv_19174:HG3_PB_pbsv_18859:HG4_Ill_MetaSV_3118:HG3_Ill_MetaSV_3161:HG2_Ill_tnscope_1991:HG4_PB_SVrefine2PBcRDovetail_9665:HG4_PB_SVrefine2Falcon1Dovetail_11959:HG4_Ill_scalpel_17216:HG4_Ill_manta_4293:HG4_Ill_SVrefine2DISCOVARDovetail_13271:HG4_Ill_GATKHCSBGrefine_12892:HG4_10X_allpass_3411:HG3_PB_SVrefine2PBcRDovetail_9427:HG3_PB_SVrefine2Falcon1Dovetail_11935:HG3_Ill_scalpel_17968:HG3_Ill_manta_4116:HG3_Ill_SVrefine2DISCOVARDovetail_13462:HG3_Ill_GATKHCSBGrefine_12311:HG3_10X_allpass_3555:HG2_PB_assemblyticsfalcon_16252:HG2_PB_SVrefine2PBcRplusDovetail_6816:HG2_PB_SVrefine2PB10Xhap12_14012:HG2_PB_SVrefine2Falcon2Bionano_9485:HG2_PB_SVrefine2Falcon1plusDovetail_7345:HG2_Ill_scalpel_17613:HG2_Ill_manta_5063:HG2_Ill_breakscan11_2735:HG2_Ill_SVrefine2DISCOVARplusDovetail_7879:HG2_Ill_MetaSV_3010:HG2_Ill_GATKHCSBGrefine_12477:HG2_10X_allpass_2895:HG2_10X_SVrefine210Xhap12_13396:HG4_Ill_Krunchall_25566:HG3_Ill_Krunchall_24760;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13396:HG2_10X_allpass_2895:HG2_Ill_GATKHCSBGrefine_12477:HG2_Ill_MetaSV_3010:HG2_Ill_SVrefine2DISCOVARplusDovetail_7879:HG2_Ill_breakscan11_2735:HG2_Ill_manta_5063:HG2_Ill_scalpel_17613:HG2_PB_SVrefine2Falcon1plusDovetail_7345:HG2_PB_SVrefine2Falcon2Bionano_9485:HG2_PB_SVrefine2PB10Xhap12_14012:HG2_PB_SVrefine2PBcRplusDovetail_6816:HG2_PB_assemblyticsfalcon_16252:HG3_10X_allpass_3555:HG3_Ill_GATKHCSBGrefine_12311:HG3_Ill_SVrefine2DISCOVARDovetail_13462:HG3_Ill_manta_4116:HG3_Ill_scalpel_17968:HG3_PB_SVrefine2Falcon1Dovetail_11935:HG3_PB_SVrefine2PBcRDovetail_9427:HG4_10X_allpass_3411:HG4_Ill_GATKHCSBGrefine_12892:HG4_Ill_SVrefine2DISCOVARDovetail_13271:HG4_Ill_manta_4293:HG4_Ill_scalpel_17216:HG4_PB_SVrefine2Falcon1Dovetail_11959:HG4_PB_SVrefine2PBcRDovetail_9665;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0941176;ClusterMaxSizeDiff=0.0941176;ClusterMaxEditDist=0.221893;PBcalls=17;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=14;TenXexactcalls=4;CGexactcalls=0;HG2count=19;HG3count=11;HG4count=13;NumTechs=3;NumTechsExact=3;SVLEN=-346;DistBack=10866;DistForward=-331;DistMin=-331;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=21:39590527-39590888;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2320.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:55:1/1:0:26:0:26:1/1:0:21:0:23:1/1:0:58:./.:2:14:.:.:.
chr21	39801471	HG4_Ill_svaba_23252	GTATATGTACATGTATACACATGTACATATATACATATGTGTATATGTACA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23438:HG2_PB_HySA_34602:HG4_PB_HySA_27529:HG4_Ill_svaba_23252:HG4_Ill_250bpfermikitraw_24541:HG4_Ill_150bpfermikitraw_23609:HG3_Ill_svaba_23561:HG3_Ill_250bpfermikitraw_24204:HG3_Ill_150bpfermikitraw_23491:HG2_Ill_svaba_23333:HG2_Ill_250bpfermikitraw_24909;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23438:HG4_Ill_svaba_23252:HG4_Ill_250bpfermikitraw_24541:HG4_Ill_150bpfermikitraw_23609:HG3_Ill_svaba_23561:HG3_Ill_250bpfermikitraw_24204:HG3_Ill_150bpfermikitraw_23491:HG2_Ill_svaba_23333:HG2_Ill_250bpfermikitraw_24909;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0392157;ClusterMaxSizeDiff=0.0392157;ClusterMaxEditDist=0.039604;PBcalls=2;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=-7;DistForward=-45;DistMin=-45;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=21:39801470-39801523;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2321.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:44:1/1:3:12:3:16:1/1:0:31:1:27:1/1:0:40:./.:.:.:.:.:.
chr21	40507972	HG2_10X_SVrefine210Xhap12_13398	ATGGTGGATCCATGTCATTACACGTTTGTCCAGGCCCGTAGAACATACAACCCCAAGAGTGAGCCCTGTGTAAACTCTGGCTC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13398:HG4_PB_assemblyticsfalcon_15962:HG2_PB_assemblyticsfalcon_16262:HG4_PB_pbsv_19109:HG2_PB_pbsv_19176:HG3_PB_pbsv_18862:HG4_Ill_250bpfermikitraw_24549:HG4_Ill_150bpfermikitraw_23619:HG3_Ill_250bpfermikitraw_24214:HG3_Ill_150bpfermikitraw_23504:HG2_Ill_250bpfermikitraw_24920:HG2_Ill_150bpfermikitraw_23447:HG4_PB_SVrefine2PBcRDovetail_9668:HG4_PB_SVrefine2Falcon1Dovetail_11963:HG4_Ill_SVrefine2DISCOVARDovetail_13279:HG3_PB_SVrefine2PBcRDovetail_9430:HG3_PB_SVrefine2Falcon1Dovetail_11940:HG3_Ill_SVrefine2DISCOVARDovetail_13468:HG2_PB_SVrefine2PBcRplusDovetail_6819:HG2_PB_SVrefine2PB10Xhap12_14015:HG2_PB_SVrefine2Falcon2Bionano_9488:HG2_Ill_SVrefine2DISCOVARplusDovetail_7886;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13398:HG4_PB_SVrefine2PBcRDovetail_9668:HG4_PB_SVrefine2Falcon1Dovetail_11963:HG4_Ill_SVrefine2DISCOVARDovetail_13279:HG3_PB_SVrefine2PBcRDovetail_9430:HG3_PB_SVrefine2Falcon1Dovetail_11940:HG3_Ill_SVrefine2DISCOVARDovetail_13468:HG2_PB_SVrefine2PBcRplusDovetail_6819:HG2_PB_SVrefine2PB10Xhap12_14015:HG2_PB_SVrefine2Falcon2Bionano_9488:HG2_Ill_SVrefine2DISCOVARplusDovetail_7886;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0363636;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0493827;PBcalls=12;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-82;DistBack=10269;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=168;REFWIDENED=21:40507973-40508222;PctSeqSimilarity=0.9808;PctSizeSimilarity=1;PctRecOverlap=0.3855;SizeDiff=0;StartDistance=-51;EndDistance=-51;GTMatch=0;TruScore=78;MatchId=2322.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:2:19:0:19:0/0:6:0:7:0:0/1:6:11:./.:.:.:.:.:.
chr21	41586865	HG3_10X_allpass_3557	TAAAGATATGGAATCCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAGTACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13405:HG2_10X_allpass_2896:HG2_PB_pbsv_19188:HG3_PB_assemblyticsfalcon_16207:HG4_PB_assemblyticsfalcon_15980:HG2_PB_assemblyticsfalcon_16283:HG2_PB_assemblyticsPBcR_15793:HG3_PB_HySA_28582:HG3_Ill_Krunchall_24783:HG2_PB_HySA_34631:HG2_Ill_Krunchall_25253:HG4_PB_pbsv_19118:HG3_PB_pbsv_18877:HG4_Ill_MetaSV_3124:HG3_Ill_MetaSV_3166:HG2_Ill_tnscope_1992:HG4_PB_SVrefine2PBcRDovetail_9670:HG4_PB_SVrefine2Falcon1Dovetail_11966:HG4_Ill_manta_4297:HG4_Ill_GATKHCSBGrefine_12898:HG4_10X_allpass_3414:HG3_PB_SVrefine2PBcRDovetail_9436:HG3_PB_SVrefine2Falcon1Dovetail_11945:HG3_Ill_scalpel_17991:HG3_Ill_manta_4119:HG3_Ill_SVrefine2DISCOVARDovetail_13471:HG3_Ill_Krunchall_24782:HG3_Ill_GATKHCSBGrefine_12318:HG3_10X_allpass_3557:HG2_PB_SVrefine2PBcRplusDovetail_6824:HG2_PB_SVrefine2PB10Xhap12_14020:HG2_PB_SVrefine2Falcon2Bionano_9493:HG2_PB_SVrefine2Falcon1plusDovetail_7353:HG2_Ill_breakscan11_2737:HG2_Ill_GATKHCSBGrefine_12485;NumClusterSVs=35;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13405:HG4_PB_SVrefine2PBcRDovetail_9670:HG4_PB_SVrefine2Falcon1Dovetail_11966:HG4_Ill_manta_4297:HG4_Ill_GATKHCSBGrefine_12898:HG4_10X_allpass_3414:HG3_PB_SVrefine2PBcRDovetail_9436:HG3_PB_SVrefine2Falcon1Dovetail_11945:HG3_Ill_scalpel_17991:HG3_Ill_manta_4119:HG3_Ill_SVrefine2DISCOVARDovetail_13471:HG3_Ill_Krunchall_24782:HG3_Ill_GATKHCSBGrefine_12318:HG3_10X_allpass_3557:HG2_PB_SVrefine2PBcRplusDovetail_6824:HG2_PB_SVrefine2PB10Xhap12_14020:HG2_PB_SVrefine2Falcon2Bionano_9493:HG2_PB_SVrefine2Falcon1plusDovetail_7353:HG2_Ill_breakscan11_2737:HG2_Ill_GATKHCSBGrefine_12485;NumExactMatchSVs=20;ClusterMaxShiftDist=0.084507;ClusterMaxSizeDiff=0.084507;ClusterMaxEditDist=0.084507;PBcalls=17;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=13;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-325;DistBack=-641;DistForward=-39;DistMin=-641;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=21:41586866-41587204;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:0|1:28:1:1:29:0|1:38:0:0:15:0/1:21:13:0/1:30:7:.:.:.
chr21	41902806	HG2_Ill_manta_5072	GTCCATCCATCCATCCATCCATCCATCCATCCATCCATTCAACCATCCATCCA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24941:HG2_PB_assemblyticsfalcon_16293:HG2_PB_HySA_34641:HG4_Ill_svaba_23277:HG4_Ill_scalpel_17243:HG4_Ill_manta_4301:HG4_Ill_Krunchall_25590:HG4_Ill_GATKHC_29956:HG4_Ill_GATKHCSBGrefine_12903:HG4_Ill_250bpfermikitraw_24569:HG4_Ill_150bpfermikitraw_23636:HG2_Ill_svaba_23362:HG2_Ill_scalpel_17643:HG2_Ill_manta_5072:HG2_Ill_Krunchall_25261:HG2_Ill_GATKHC_29998:HG2_Ill_GATKHCSBGrefine_12489;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24941:HG4_Ill_svaba_23277:HG4_Ill_scalpel_17243:HG4_Ill_manta_4301:HG4_Ill_Krunchall_25590:HG4_Ill_GATKHC_29956:HG4_Ill_GATKHCSBGrefine_12903:HG4_Ill_250bpfermikitraw_24569:HG4_Ill_150bpfermikitraw_23636:HG2_Ill_svaba_23362:HG2_Ill_scalpel_17643:HG2_Ill_manta_5072:HG2_Ill_Krunchall_25261:HG2_Ill_GATKHC_29998:HG2_Ill_GATKHCSBGrefine_12489;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0990099;ClusterMaxSizeDiff=0.0990099;ClusterMaxEditDist=0.116505;PBcalls=2;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-52;DistBack=12261;DistForward=2571;DistMin=2571;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=37;REFWIDENED=21:41902807-41902895;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2325.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:22:0|1:29:4:3:17:./.:1:18:29:0:0/1:26:28:./.:.:.:.:.:.
chr21	41957248	HG3_Ill_MetaSV_3169	TAAAGAAAAATGCTGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_PB_HySA_28592:HG3_PB_pbsv_18885:HG2_PB_pbsv_19194:HG3_PB_SVrefine2PBcRDovetail_9441:HG3_Ill_svaba_23586:HG3_Ill_scalpel_17996:HG3_Ill_manta_4120:HG3_Ill_SVrefine2DISCOVARDovetail_13476:HG3_Ill_MetaSV_3169:HG3_Ill_GATKHC_29913:HG3_Ill_GATKHCSBGrefine_12322:HG3_Ill_250bpfermikitraw_24235:HG3_Ill_150bpfermikitraw_23523:HG3_CG_vcfBeta_10154:HG3_10X_allpass_3558:HG2_PB_SVrefine2PB10Xhap12_14027:HG2_Ill_svaba_23364:HG2_Ill_scalpel_17646:HG2_Ill_manta_5073:HG2_Ill_breakscan11_2738:HG2_Ill_SpiralSDKrefine_10257:HG2_Ill_SVrefine2DISCOVARplusDovetail_7895:HG2_Ill_MetaSV_3015:HG2_Ill_GATKHCSBGrefine_12490:HG2_CG_vcfBeta_10722:HG2_10X_allpass_2897:HG2_10X_SVrefine210Xhap12_13411:HG3_Ill_Spiral_19223:HG2_Ill_Spiral_1220;NumClusterSVs=29;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13411:HG2_10X_allpass_2897:HG2_CG_vcfBeta_10722:HG2_Ill_GATKHCSBGrefine_12490:HG2_Ill_MetaSV_3015:HG2_Ill_SVrefine2DISCOVARplusDovetail_7895:HG2_Ill_SpiralSDKrefine_10257:HG2_Ill_breakscan11_2738:HG2_Ill_manta_5073:HG2_Ill_scalpel_17646:HG2_Ill_svaba_23364:HG2_PB_SVrefine2PB10Xhap12_14027:HG3_10X_allpass_3558:HG3_CG_vcfBeta_10154:HG3_Ill_150bpfermikitraw_23523:HG3_Ill_250bpfermikitraw_24235:HG3_Ill_GATKHCSBGrefine_12322:HG3_Ill_GATKHC_29913:HG3_Ill_MetaSV_3169:HG3_Ill_SVrefine2DISCOVARDovetail_13476:HG3_Ill_manta_4120:HG3_Ill_scalpel_17996:HG3_Ill_svaba_23586:HG3_PB_SVrefine2PBcRDovetail_9441;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0166667;ClusterMaxSizeDiff=0.0166667;ClusterMaxEditDist=0.0252101;PBcalls=5;Illcalls=19;TenXcalls=3;CGcalls=2;PBexactcalls=2;Illexactcalls=17;TenXexactcalls=3;CGexactcalls=2;HG2count=14;HG3count=15;HG4count=0;NumTechs=4;NumTechsExact=4;SVLEN=-119;DistBack=-16;DistForward=-59;DistMin=-59;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=21:41957249-41957380;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2326.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:38:0|1:23:2:2:35:0|1:30:0:0:22:0/1:15:14:./.:.:.:.:.:.
chr21	42341846	HG4_Ill_svaba_23281	TGGAAGGAATTAAAGAGAGAGAAGTTAGGAAGGAGGGAGGGAGGAAAGATACAGAA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13414:HG2_PB_pbsv_19195:HG4_PB_pbsv_19124:HG4_PB_HySA_27562:HG4_PB_assemblyticsfalcon_15993:HG4_Ill_svaba_23281:HG4_Ill_scalpel_17245:HG4_Ill_Krunchall_25593:HG4_Ill_GATKHC_29957:HG4_Ill_GATKHCSBGrefine_12904:HG4_Ill_250bpfermikitraw_24571:HG4_Ill_150bpfermikitraw_23639:HG2_Ill_svaba_23367:HG2_Ill_scalpel_17649:HG2_Ill_SpiralSDKrefine_10260:HG2_Ill_Krunchall_25264:HG2_Ill_GATKHC_30004:HG2_Ill_GATKHCSBGrefine_12491:HG2_Ill_250bpfermikitraw_24944:HG2_Ill_150bpfermikitraw_23469:HG4_PB_SVrefine2PBcRDovetail_9674:HG4_Ill_SVrefine2DISCOVARDovetail_13287:HG2_PB_SVrefine2PBcRplusDovetail_6829:HG2_PB_SVrefine2PB10Xhap12_14028:HG2_PB_SVrefine2Falcon2Bionano_9499;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23469:HG2_Ill_250bpfermikitraw_24944:HG2_Ill_GATKHCSBGrefine_12491:HG2_Ill_GATKHC_30004:HG2_Ill_Krunchall_25264:HG2_Ill_SpiralSDKrefine_10260:HG2_Ill_scalpel_17649:HG2_Ill_svaba_23367:HG4_Ill_150bpfermikitraw_23639:HG4_Ill_250bpfermikitraw_24571:HG4_Ill_GATKHCSBGrefine_12904:HG4_Ill_GATKHC_29957:HG4_Ill_Krunchall_25593:HG4_Ill_scalpel_17245:HG4_Ill_svaba_23281:HG4_PB_assemblyticsfalcon_15993;NumExactMatchSVs=16;ClusterMaxShiftDist=0.036036;ClusterMaxSizeDiff=0.0357143;ClusterMaxEditDist=0.18018;PBcalls=8;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-55;DistBack=9673;DistForward=-36;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=83;REFWIDENED=21:42341812-42341949;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2327.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:39:0|1:37:3:0:34:1|0:0:16:20:1:0/1:15:19:./.:.:.:.:.:.
chr21	42616454	HG2_PB_pbsv_19197	TAATGTCATCAGTTAAGGCAGGGACTGGCCATTTTCACTTCTTTTGTGGTGG	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24949:HG4_PB_pbsv_19127:HG2_PB_HySA_34647:HG4_Ill_svaba_23283:HG4_Ill_manta_4303:HG4_Ill_Krunchall_25600:HG4_Ill_GATKHC_29961:HG4_Ill_GATKHCSBGrefine_12907:HG4_Ill_250bpfermikitraw_24575:HG4_Ill_150bpfermikitraw_23643:HG2_PB_pbsv_19197:HG2_PB_assemblyticsPBcR_15810:HG2_Ill_svaba_23371:HG2_Ill_scalpel_17654:HG2_Ill_manta_5075:HG2_Ill_Krunchall_25269:HG2_Ill_GATKHC_30011:HG2_Ill_GATKHCSBGrefine_12494;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24949:HG4_Ill_svaba_23283:HG4_Ill_manta_4303:HG4_Ill_Krunchall_25600:HG4_Ill_GATKHC_29961:HG4_Ill_GATKHCSBGrefine_12907:HG4_Ill_250bpfermikitraw_24575:HG4_Ill_150bpfermikitraw_23643:HG2_PB_pbsv_19197:HG2_PB_assemblyticsPBcR_15810:HG2_Ill_svaba_23371:HG2_Ill_scalpel_17654:HG2_Ill_manta_5075:HG2_Ill_Krunchall_25269:HG2_Ill_GATKHC_30011:HG2_Ill_GATKHCSBGrefine_12494;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0384615;PBcalls=4;Illcalls=14;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=65208;DistForward=4514;DistMin=4514;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=47;REFWIDENED=21:42616455-42616552;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2328.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:29:0|1:19:2:0:25:1|0:0:10:11:1:0/1:22:18:./.:.:.:.:.:.
chr21	42911938	HG2_PB_SVrefine2PB10Xhap12_14035	GAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCGCCACTTCACTCCCGCCTGGCAACGAGTGAGACTCCATCTCAATAAATAAATAAGTAAATAATTGAGATGGGTTCTCACTATATTGCCTAGGCTGGATCCCAACCCCTTGGCTCAAGGGATCCTCCTGCCTCAATACAAATACCAATTTTTGTATTTGTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCCATCTCTTGACCTCGTGATCTGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCACTGCACCTGGCCAATTTGTTATTTTTTTATAGAAATGAGGTCTCACTATGTTGCCCAGGCTAGTCTCAAACCCTTAGGCTCAAGCAGTCCTCACACTTCAGCCTCCCAAAGTGCAGGGATTAC	G	20	PASS	ClusterIDs=HG2_10X_allpass_2898:HG3_PB_assemblyticsfalcon_16238:HG2_PB_assemblyticsPBcR_15814:HG2_Ill_MetaSV_3016:HG2_Ill_Spiral_1221:HG3_Ill_Krunchall_24803:HG2_PB_pbsv_19202:HG2_Ill_tnscope_1993:HG3_PB_pbsv_18890:HG3_PB_SVrefine2Falcon1Dovetail_11955:HG3_Ill_manta_4123:HG3_Ill_SVrefine2DISCOVARDovetail_13482:HG3_Ill_GATKHCSBGrefine_12327:HG3_10X_allpass_3560:HG2_PB_SVrefine2PBcRplusDovetail_6831:HG2_PB_SVrefine2PB10Xhap12_14035:HG2_Ill_manta_5076:HG2_Ill_SpiralSDKrefine_10264:HG2_Ill_SVrefine2DISCOVARplusDovetail_7900:HG2_Ill_Krunchall_25273:HG2_Ill_GATKHCSBGrefine_12495;NumClusterSVs=21;ExactMatchIDs=HG2_10X_allpass_2898:HG3_PB_pbsv_18890:HG3_PB_SVrefine2Falcon1Dovetail_11955:HG3_Ill_manta_4123:HG3_Ill_SVrefine2DISCOVARDovetail_13482:HG3_Ill_GATKHCSBGrefine_12327:HG3_10X_allpass_3560:HG2_PB_SVrefine2PBcRplusDovetail_6831:HG2_PB_SVrefine2PB10Xhap12_14035:HG2_Ill_manta_5076:HG2_Ill_SpiralSDKrefine_10264:HG2_Ill_SVrefine2DISCOVARplusDovetail_7900:HG2_Ill_Krunchall_25273:HG2_Ill_GATKHCSBGrefine_12495;NumExactMatchSVs=14;ClusterMaxShiftDist=0.0892274;ClusterMaxSizeDiff=0.0892274;ClusterMaxEditDist=0.0892274;PBcalls=7;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-449;DistBack=-543;DistForward=-448;DistMin=-543;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=21:42911939-42912396;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2329.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:22:0|1:22:0:0:21:0|1:41:0:0:15:0/1:55:28:0/1:39:14:.:.:.
chr21	43109417	HG3_Ill_svaba_23599	CCACGGGCCCTCGTCACCGGGTCACCCCGCATGGGCCCTGGTCACCGGGTCACCCTG	C	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23479:HG3_Ill_GATKHC_29931:HG3_Ill_GATKHCSBGrefine_12328:HG2_Ill_GATKHC_30018:HG2_Ill_GATKHCSBGrefine_12497:HG2_Ill_SpiralSDKrefine_10265:HG2_PB_assemblyticsfalcon_16309:HG2_PB_pbsv_19205:HG3_PB_pbsv_18892:HG3_PB_assemblyticsfalcon_16244:HG3_Ill_svaba_23599:HG3_Ill_250bpfermikitraw_24246:HG3_Ill_150bpfermikitraw_23532:HG2_Ill_Krunchall_25278:HG2_Ill_250bpfermikitraw_24956;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23479:HG3_PB_assemblyticsfalcon_16244:HG3_Ill_svaba_23599:HG3_Ill_250bpfermikitraw_24246:HG3_Ill_150bpfermikitraw_23532:HG2_Ill_Krunchall_25278:HG2_Ill_250bpfermikitraw_24956;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0917431;ClusterMaxSizeDiff=0.0917431;ClusterMaxEditDist=0.111111;PBcalls=4;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=6458;DistForward=631;DistMin=631;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=414;REFWIDENED=21:43109250-43109719;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2330.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:0|1:27:5:5:21:./.:10:1:0:5:0/1:20:15:./.:.:.:.:.:.
chr21	43264498	HG2_PB_SVrefine2Falcon2Bionano_9507	GACACAGCCCCTCCCCCCTCACAGGGACACACACACACACACACACACACACACACACACACACACACACAGAGCCCCTCCCCCCTCACAGGGACACACACACAGTCCCTCCCCCCTCACAGGGACACACACAGCCCCTCCCCCCTCACAGGGACACACACACACACACACACACACACACACAGCCCCTCCCCCCTCACAGGGACACATACAGCCCCTCCCCCTCACAGGGACACACAGCCCCTCCCCCCTCACAGAGACACACATACACAGTCCCTCCCCCCTCACAGGGACACACACAGCCCCTCCTCCATCACAGGGACACACACACACACACACACACACACACACACAGAGTCCCTTCCCCCTCACAGGGACACACACAGTCCCTCCCCCCTCACAGGGACACACACAGTCCCTCCCCCCTCACAGGGACACACACAGCCCCTCCCCCCTCACAGGGACACACAGCCCCTCCCCCTCACAAGGACACACACAGCCCCTCCCCCTCACAGGGACACACACAGCCTCTCCCCCCACACAGGGACACACAGCCCCTCCCCCCTCACAGGGACAC	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9507:HG2_PB_pbsv_19209:HG4_PB_pbsv_19138:HG2_PB_SVrefine2PBcRplusDovetail_6834:HG4_PB_SVrefine2PBcRDovetail_9682:HG2_PB_SVrefine2PB10Xhap12_14039:HG4_PB_SVrefine2Falcon1Dovetail_11978;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9507:HG4_PB_SVrefine2Falcon1Dovetail_11978;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0315789;ClusterMaxSizeDiff=0.0299033;ClusterMaxEditDist=0.142105;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-576;DistBack=-179;DistForward=-577;DistMin=-577;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=32;REFWIDENED=21:43264499-43265079;PctSeqSimilarity=0.8834;PctSizeSimilarity=0.9878;PctRecOverlap=0.6984;SizeDiff=7;StartDistance=-174;EndDistance=-167;GTMatch=0;TruScore=85;MatchId=2332.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:24:./.:9:14:19:5:0/0:29:2:39:0:0/0:11:0:./.:51:5:.:.:.
chr21	43311216	HG2_Ill_svaba_23382	GGACTGCTGGAAAAGGAATGAAAAAGGTGGGTAAGTAGTGACATTTTTTACAGTGATCTAAAGTTAGGAGCCTGTGTGCAGGAGCTTCGGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13426:HG2_PB_HySA_34677:HG4_PB_assemblyticsfalcon_16019:HG3_Ill_Spiral_19233:HG2_Ill_Spiral_1222:HG3_PB_pbsv_18899:HG2_PB_pbsv_19212:HG4_PB_SVrefine2Falcon1Dovetail_11983:HG3_Ill_svaba_23605:HG3_Ill_Krunchall_24811:HG3_Ill_GATKHC_29936:HG3_Ill_GATKHCSBGrefine_12332:HG3_Ill_250bpfermikitraw_24251:HG2_Ill_svaba_23382:HG2_Ill_manta_5079:HG2_Ill_SpiralSDKrefine_10267:HG2_Ill_Krunchall_25284:HG2_Ill_GATKHC_30023:HG2_Ill_GATKHCSBGrefine_12498:HG2_Ill_250bpfermikitraw_24959:HG3_PB_SVrefine2PBcRDovetail_9449:HG3_PB_SVrefine2Falcon1Dovetail_11961:HG3_PB_HySA_28613:HG2_PB_SVrefine2PBcRplusDovetail_6836:HG2_PB_SVrefine2PB10Xhap12_14042:HG2_PB_SVrefine2Falcon1plusDovetail_7366:HG2_Ill_SVrefine2DISCOVARplusDovetail_7905;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24959:HG2_Ill_GATKHCSBGrefine_12498:HG2_Ill_GATKHC_30023:HG2_Ill_Krunchall_25284:HG2_Ill_SpiralSDKrefine_10267:HG2_Ill_manta_5079:HG2_Ill_svaba_23382:HG3_Ill_250bpfermikitraw_24251:HG3_Ill_GATKHCSBGrefine_12332:HG3_Ill_GATKHC_29936:HG3_Ill_Krunchall_24811:HG3_Ill_svaba_23605:HG4_PB_SVrefine2Falcon1Dovetail_11983;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0444444;ClusterMaxSizeDiff=0.0444444;ClusterMaxEditDist=0.0782123;PBcalls=11;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=2;SVLEN=-90;DistBack=25883;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=90;REFWIDENED=21:43311165-43311344;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2333.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:29:./.:14:14:8:10:0|1:24:0:0:10:0/1:31:26:./.:.:.:.:.:.
chr21	43678059	HG2_Ill_SVrefine2DISCOVARplusDovetail_7908	TCTCCATCCATCCCTCCACTCATCCCTTCATTTACTCCATCCATCCTTCCTCCCATTTCCCCATCCACTCCATCAGCCTCTCCATCCATCCCTCCACTCATCCCTCAACTCACCTCTTCATCCACTCCATCCATCCTTCCACACTTTTCCCCATCCACTCCATCAGCCTCTCCATCCATCCCTCCATTAATCCTCCC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7908:HG3_PB_SVrefine2PBcRDovetail_9452:HG4_PB_pbsv_19148:HG4_PB_assemblyticsfalcon_16028:HG3_PB_pbsv_18902:HG2_PB_pbsv_19217:HG4_Ill_scalpel_17259:HG3_Ill_scalpel_18013:HG2_Ill_scalpel_17661:HG4_PB_SVrefine2Falcon1Dovetail_11986:HG4_Ill_SVrefine2DISCOVARDovetail_13300:HG3_PB_SVrefine2Falcon1Dovetail_11963:HG3_Ill_SVrefine2DISCOVARDovetail_13491:HG2_PB_SVrefine2PB10Xhap12_14046:HG2_PB_SVrefine2Falcon2Bionano_9512:HG2_PB_SVrefine2Falcon1plusDovetail_7370;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7908:HG4_PB_SVrefine2Falcon1Dovetail_11986:HG4_Ill_SVrefine2DISCOVARDovetail_13300:HG3_PB_SVrefine2Falcon1Dovetail_11963:HG3_Ill_SVrefine2DISCOVARDovetail_13491:HG2_PB_SVrefine2PB10Xhap12_14046:HG2_PB_SVrefine2Falcon2Bionano_9512:HG2_PB_SVrefine2Falcon1plusDovetail_7370;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0204082;ClusterMaxSizeDiff=0.0203562;ClusterMaxEditDist=0.0305344;PBcalls=10;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-196;DistBack=6405;DistForward=-188;DistMin=-188;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=95;REFWIDENED=21:43678060-43678350;PctSeqSimilarity=0.9828;PctSizeSimilarity=1;PctRecOverlap=0.9645;SizeDiff=0;StartDistance=-7;EndDistance=-7;GTMatch=0;TruScore=98;MatchId=2334.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:33:./.:11:30:13:3:./.:7:8:91:2:0/1:30:15:./.:.:.:.:.:.
chr21	44007969	HG3_Ill_MetaSV_3180	CATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTGCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTGCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTGCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCATGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCGGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTGCCGCCCCGTTTACATCCACGCAGGCGTTGCCCCTTACCTGCACCGAGCCTGCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGGGCCTGCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCCGCCCCGTTTACATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTAT	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_11968:HG4_Ill_MetaSV_3134:HG3_Ill_MetaSV_3180:HG2_Ill_MetaSV_3021:HG4_PB_pbsv_19156:HG2_PB_pbsv_19224:HG4_PB_SVrefine2Falcon1Dovetail_11990:HG2_PB_SVrefine2PB10Xhap12_14052:HG4_PB_SVrefine2PBcRDovetail_9689;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_MetaSV_3021:HG3_Ill_MetaSV_3180:HG4_Ill_MetaSV_3134;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0245631;ClusterMaxSizeDiff=0.0245631;ClusterMaxEditDist=0.0321133;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-2091;DistBack=10;DistForward=-2000;DistMin=-2000;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=875;REFWIDENED=21:44007557-44010522;PctSeqSimilarity=0.7977;PctSizeSimilarity=0.9762;PctRecOverlap=0.9286;SizeDiff=-51;StartDistance=153;EndDistance=102;GTMatch=0;TruScore=90;MatchId=2335.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:33:0|1:31:3:0:25:./.:0:0:0:1:./.:0:1:0/1:23:51:2042:.:.
chr21	44328674	HG2_Ill_250bpfermikitraw_24991	GCCTGTGTGTGAGCCGAGTCATTCATAAAGAGCTGTTCACAGATAGGGTTGATGAAGAATGCTTGGTAGGTAAGCA	G	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_24991:HG3_PB_pbsv_18916:HG2_PB_pbsv_19232:HG2_Ill_GATKHCSBGrefine_12509;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_250bpfermikitraw_24991:HG2_Ill_GATKHCSBGrefine_12509;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0266667;ClusterMaxSizeDiff=0.0266667;ClusterMaxEditDist=0.0805369;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-75;DistBack=12245;DistForward=-29;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=299;REFWIDENED=21:44328561-44328934;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2336.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:25:./.:16:8:4:14:./.:16:2:0:2:0/1:12:7:./.:.:.:.:.:.
chr21	44340137	HG2_PB_SVrefine2Falcon2Bionano_9521	TGAGGACAAATGAGGATAGGGCAGAGACGTTGCAGGACAGGTTTGTACCCGAC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13441:HG4_PB_pbsv_19165:HG2_PB_pbsv_19233:HG3_PB_pbsv_18917:HG4_PB_assemblyticsfalcon_16056:HG4_Ill_svaba_23328:HG4_Ill_manta_4310:HG4_Ill_SVrefine2DISCOVARDovetail_13304:HG4_Ill_Krunchall_25639:HG4_Ill_GATKHCSBGrefine_12926:HG4_Ill_250bpfermikitraw_24615:HG4_Ill_150bpfermikitraw_23676:HG3_PB_SVrefine2PBcRDovetail_9461:HG3_PB_SVrefine2Falcon1Dovetail_11975:HG3_Ill_svaba_23634:HG3_Ill_scalpel_18030:HG3_Ill_manta_4129:HG3_Ill_SVrefine2DISCOVARDovetail_13497:HG3_Ill_Krunchall_24834:HG3_Ill_GATKHCSBGrefine_12342:HG3_Ill_250bpfermikitraw_24273:HG3_Ill_150bpfermikitraw_23556:HG2_PB_SVrefine2PBcRplusDovetail_6848:HG2_PB_SVrefine2PB10Xhap12_14058:HG2_PB_SVrefine2Falcon2Bionano_9521:HG2_Ill_svaba_23421:HG2_Ill_scalpel_17684:HG2_Ill_manta_5086:HG2_Ill_SVrefine2DISCOVARplusDovetail_7912:HG2_Ill_Krunchall_25313:HG2_Ill_GATKHCSBGrefine_12510:HG2_Ill_250bpfermikitraw_24992;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13441:HG4_PB_assemblyticsfalcon_16056:HG4_Ill_svaba_23328:HG4_Ill_manta_4310:HG4_Ill_SVrefine2DISCOVARDovetail_13304:HG4_Ill_Krunchall_25639:HG4_Ill_GATKHCSBGrefine_12926:HG4_Ill_250bpfermikitraw_24615:HG4_Ill_150bpfermikitraw_23676:HG3_PB_SVrefine2PBcRDovetail_9461:HG3_PB_SVrefine2Falcon1Dovetail_11975:HG3_Ill_svaba_23634:HG3_Ill_scalpel_18030:HG3_Ill_manta_4129:HG3_Ill_SVrefine2DISCOVARDovetail_13497:HG3_Ill_Krunchall_24834:HG3_Ill_GATKHCSBGrefine_12342:HG3_Ill_250bpfermikitraw_24273:HG3_Ill_150bpfermikitraw_23556:HG2_PB_SVrefine2PBcRplusDovetail_6848:HG2_PB_SVrefine2PB10Xhap12_14058:HG2_PB_SVrefine2Falcon2Bionano_9521:HG2_Ill_svaba_23421:HG2_Ill_scalpel_17684:HG2_Ill_manta_5086:HG2_Ill_SVrefine2DISCOVARplusDovetail_7912:HG2_Ill_Krunchall_25313:HG2_Ill_GATKHCSBGrefine_12510:HG2_Ill_250bpfermikitraw_24992;NumExactMatchSVs=29;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0582524;PBcalls=9;Illcalls=22;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=22;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-52;DistBack=11325;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=52;REFWIDENED=21:44340138-44340241;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2337.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:44:1/1:2:17:2:18:1/1:0:10:0:11:1/1:0:35:./.:.:.:.:.:.
chr21	44970364	HG3_Ill_GATKHCSBGrefine_12346	GGAGATGGCACTGAGACACCCTAGCTCCACATGCCCTTGTGATAGCTCTTGTCGCAGGCATTGATTTCCCAGTGCCACATTTCTCAGACATGGGCACTCATGCTAACACAAAGAAAACTCACCAAACTCGGCCTGGAGGACACCCTGACAGCTATGCTGGCTCCTTGGTACTTGCTGGTGGGCTCCTCAGGCACATGCTCACAGGGCCCTATTGTCAACCACACCTTCAAATGACAATAAACAAATCTATCTTTACTTATCTGCTAATTGTCTGTTTTTCTAAAACTCACACATTAAATGCATAAACTATAATAACACATGAGGCACACTGAGTGTGCAGCACCATGTGGAGGCGCAAACACAGACTCTGGAGTCACTCACCAGCAGCCCCTCGGCAAAGCCATGTCACCTTGCTAGGCCTTTGTTTTCTCATCTATAAACTGGTTTTAAATTCTCTACACCACTATTATAAAGACTAAATAAAGGAGGAGATACCAGCAAAACTGTCTATCACACTTGGTAGATAGTAGGCATTCCATAAACAGTAATTTCCAAATTACACAAACTAAAGCCTCACCCCACCCCCATGCTCTCCTCCAACACCCCATGCCTGCCACATGGGCCTCTGGCTCTGCTAACACACCCCACCTCGGGCGCTTGTACATGTTGATCCCTCTGGCTGGAACGTGCCTTCCCAGACACCCTAAGAGCTTGCTTCGCTTCCTTTCCAACTTGGGCCTGGCAGAATGGCTCCTACAAAGGGTGGCGAGAAGAAAAAGGGCCGTTCTACCATCAACAAGGTGGTGACCTGAGATACGCCATCAACATTCACAGCACATCCACAGAGTGGCCTTCAAGAAGCGTGCCCCTCAGGCACTCAAAGAGATTTGGAAATTTGCCATGAAGGAGATGGGAACTCCAGATATGTGCATTGATACCAGGCTCAACAAAGCTGTCTGGACCAAAGGAATAAGGAATATCCCATACCGCATCCGTGTGCGGTTGTCCAGAAAATGTAAAGAGAATGAAGATTCACCAAATAAACTCTATACTTTGATTACTTATGTACCCGTTACTGCTTTCAAAAATCTATAGACAGTCAATGTGGATGAGAACTAACAGCTGATCATCAAATACATCAAATAAAGTTATAAAATTGCCTTAAAAAAAAGAGCTCACTTCCCTCTTCTTTCAGATCTTCGTGTGGATGTCAACCGCTCAGTGGTCTTCCATGACCACTCTAAAATTAAAACACAAAAGCTACCCCTCTCAGGTCTCCCGCCCTTTACCCTCCATGGCATTAAATATCACAGAGTCCACAGTGCCCTGCGCTGCTTTACTGGCGCTGCTGTCTCTCCTCACTGGCTAGCTCCATGAAGGCAAGGACTTGGGGCTGTCTGGCTTGCTGCTGTGGCCTCAGTGCCTAGAACAGGACCTGGCACGTAGTGGTGAGTGAATTAGTGATGTTTAGTGATAGACACTGTTTCTAATTATGTAATTAGAAAGAAGGAGGACTACTACTAAGTGTAAATCTGATTAAAGATATTGAAGACCTCCATTCAGAAAACTACAATACCCTGTTGAGAGAAAGACGGCCCTAAGCAGTGAAGAAATGTATCATGTCATGTACTGGAGGTCTCAACACTCTAAAAACGTCAATTCTTCCAAACTGATCTACAGATTCCATGAAATTTCCATCAAAATCAACACGGTGTCCTTTGTGGAATTTGACAGGCAGATTCTAAAATTTATATGGAAAGGAGACAATAATAGTGAAGGCATTTTTTGAAGAAAAACAATGTTCGTTCTAGGTATCAAAAACTTATCCATCTTGACAAGAGGCAATGTAGCACTGCAGGATGGGAGACTGGCCGAGTGCAATGGAGAGCACAGACACAGACCCCACACACGTGTGGGCACCGAGGAGAGTGGGGAAAGCACAGTGCCCTCCGCAGTCAGTGCTGGGTCTGTGAGAACCCTGGGGAACGCTTAACTTGACCCCTATCACAGAGCATGCCCAAAGATAAATGCAAAAGGCAAAAAGAGAAACCGAGGAGAAAATATAGGCAGATATATTCATGACCTTGAGGTAAGCAGACATTTTCTTAACAGGATACATTAAGCACTCAGAGTACATTCAAATCAGGAACTTCTGTTCATCAAAACATACCATTAAGAGAAATAAAGCAAGACATGGAGTGGTAAAATAAATGCGCAACTTTAATAAAATCAAAAAAGATTCTGTATCCAGAATATACAAATTCAGACAACCTAAAAGAAAAAAAGGCAAGAGCTCTGAATAGGTTGTGACAAAAATGGATATCCAAATGGCCAGTAAACACAGGAAAAGGTGCTCCACTTCAGAACTCATAAAAACAATGCAAATTAAAACCACAATGAGCCAGCCCTCCATCCCCACAGAATGGCTACAATGAAGATCTCTGACAATACCAGGTGTTTCCAAGAAAGAAAAGCAACCAGAACGCTCCTTTGCTGTTGGTAAATGTTCACACCTGATATAACCACTTTGCAAAACAGCCCAGCATAAACTACTAGAGGTGAAGACATGCACTTCTATAGATCCCAAACTTCCATTCCTAAAGATAAACGCAACAGGAAAACATGCACATGTCCTTTACCAAACGACAAGTACAAGAATGTTAGAGAAGTACTATTTGTAAAGGCCAATAACTAGAAATAATCCAAATGTGCATCAATAGTAAAATGGATAACTAAACTGGTAAATTCATACAATAGAATACAGGTTGAGCATCATCAATCTGAAAATCCAAAACCCAAAGTGCTCCAAAGTTGGAAACTTTTTGAGTGCCAACATGATGACACAAGTGAAAAATTCCACACCTGACTTCACACGACAGGTTACAATCAAAAGGCAGGCACACAACACACAGTTTATTCAGAGTCACCAAGGGAAAA	G	20	PASS	ClusterIDs=HG3_10X_allpass_3563:HG3_Ill_Krunchall_24850:HG2_Ill_Krunchall_25327:HG3_PB_assemblyticsfalcon_16301:HG2_10X_allpass_2902:HG3_Ill_Krunchall_24849:HG2_Ill_Krunchall_25326:HG4_PB_SVrefine2Falcon1Dovetail_12000:HG3_PB_pbsv_18929:HG3_PB_SVrefine2PBcRDovetail_9471:HG3_PB_SVrefine2Falcon1Dovetail_11983:HG3_Ill_SVrefine2DISCOVARDovetail_13506:HG3_Ill_MetaSV_3183:HG3_Ill_GATKHCSBGrefine_12346:HG2_PB_pbsv_19244:HG2_PB_assemblyticsPBcR_15873:HG2_PB_SVrefine2PBcRplusDovetail_6856:HG2_PB_SVrefine2PB10Xhap12_14066:HG2_PB_SVrefine2Falcon1plusDovetail_7385:HG2_Ill_breakscan11_2745:HG2_Ill_SpiralSDKrefine_10297:HG2_Ill_MetaSV_3027:HG2_10X_SVrefine210Xhap12_13445:HG2_Ill_tnscope_1994;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13445:HG2_Ill_MetaSV_3027:HG2_Ill_SpiralSDKrefine_10297:HG2_Ill_breakscan11_2745:HG2_PB_SVrefine2Falcon1plusDovetail_7385:HG2_PB_SVrefine2PB10Xhap12_14066:HG2_PB_SVrefine2PBcRplusDovetail_6856:HG2_PB_assemblyticsPBcR_15873:HG2_PB_pbsv_19244:HG3_Ill_GATKHCSBGrefine_12346:HG3_Ill_MetaSV_3183:HG3_Ill_SVrefine2DISCOVARDovetail_13506:HG3_PB_SVrefine2Falcon1Dovetail_11983:HG3_PB_SVrefine2PBcRDovetail_9471:HG3_PB_pbsv_18929:HG4_PB_SVrefine2Falcon1Dovetail_12000;NumExactMatchSVs=16;ClusterMaxShiftDist=0.00985222;ClusterMaxSizeDiff=0.00985222;ClusterMaxEditDist=0.00985222;PBcalls=10;Illcalls=11;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-2936;DistBack=14724;DistForward=-2935;DistMin=-2935;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=21:44970365-44973304;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2339.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:43:0|1:38:0:0:23:1|0:0:37:50:0:0/1:58:17:0/1:243:100:2969:.:.
chr21	45207055	HG3_Ill_GATKHCSBGrefine_12348	CACCCACTGTGTGCGTGCAACATACCCACTGTGTGCCTGACACTGTGTGCATGCGACATACCCACTGTGTGCGAGACAT	C	20	PASS	ClusterIDs=HG2_10X_allpass_2903:HG3_PB_pbsv_18936:HG3_PB_SVrefine2PBcRDovetail_9474:HG3_Ill_SVrefine2DISCOVARDovetail_13508:HG2_10X_SVrefine210Xhap12_13447:HG4_PB_assemblyticsfalcon_16076:HG4_PB_SVrefine2Falcon1Dovetail_12004:HG2_PB_pbsv_19249:HG4_PB_pbsv_19181:HG4_Ill_GATKHCSBGrefine_12933:HG4_10X_allpass_3418:HG3_Ill_manta_4131:HG3_Ill_GATKHCSBGrefine_12348:HG3_10X_allpass_3564;NumClusterSVs=14;ExactMatchIDs=HG2_10X_allpass_2903:HG4_Ill_GATKHCSBGrefine_12933:HG4_10X_allpass_3418:HG3_Ill_manta_4131:HG3_Ill_GATKHCSBGrefine_12348:HG3_10X_allpass_3564;NumExactMatchSVs=6;ClusterMaxShiftDist=0.260417;ClusterMaxSizeDiff=0.260417;ClusterMaxEditDist=0.322917;PBcalls=6;Illcalls=4;TenXcalls=4;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=3;CGexactcalls=0;HG2count=3;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-78;DistBack=-157;DistForward=52;DistMin=-157;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=21:45207054-45207144;PctSeqSimilarity=0.8744;PctSizeSimilarity=0.8041;PctRecOverlap=0.3571;SizeDiff=-19;StartDistance=-44;EndDistance=-63;GTMatch=0;TruScore=67;MatchId=2340.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:27:0|1:24:5:5:21:./.:1:6:28:0:0/1:17:4:./.:.:.:.:.:.
chr21	45583194	HG2_Ill_GATKHC_30091	TATCTGAGCCTGGCCGTTGCTCCTGGCTCTGGAGGTGCCAGAGTTTCTGAACGTTA	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_16082:HG3_PB_pbsv_18942:HG3_PB_assemblyticsfalcon_16310:HG2_PB_pbsv_19253:HG4_PB_pbsv_19186:HG4_PB_SVrefine2Falcon1Dovetail_12007:HG4_Ill_svaba_23347:HG4_Ill_SVrefine2DISCOVARDovetail_13312:HG4_Ill_Krunchall_25660:HG4_Ill_GATKHC_30040:HG4_Ill_GATKHCSBGrefine_12936:HG4_Ill_250bpfermikitraw_24633:HG3_PB_SVrefine2PBcRDovetail_9477:HG3_Ill_svaba_23657:HG3_Ill_manta_4132:HG3_Ill_SVrefine2DISCOVARDovetail_13511:HG3_Ill_Krunchall_24858:HG3_Ill_GATKHC_30000:HG3_Ill_GATKHCSBGrefine_12351:HG3_Ill_250bpfermikitraw_24294:HG3_Ill_150bpfermikitraw_23577:HG2_PB_assemblyticsfalcon_16371:HG2_PB_SVrefine2PBcRplusDovetail_6859:HG2_PB_SVrefine2PB10Xhap12_14069:HG2_PB_SVrefine2Falcon2Bionano_9530:HG2_Ill_svaba_23438:HG2_Ill_manta_5090:HG2_Ill_SVrefine2DISCOVARplusDovetail_7924:HG2_Ill_Krunchall_25334:HG2_Ill_GATKHC_30091:HG2_Ill_GATKHCSBGrefine_12518:HG2_Ill_250bpfermikitraw_25010:HG2_Ill_150bpfermikitraw_23527;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23527:HG2_Ill_250bpfermikitraw_25010:HG2_Ill_GATKHCSBGrefine_12518:HG2_Ill_GATKHC_30091:HG2_Ill_Krunchall_25334:HG2_Ill_SVrefine2DISCOVARplusDovetail_7924:HG2_Ill_manta_5090:HG2_Ill_svaba_23438:HG2_PB_SVrefine2Falcon2Bionano_9530:HG2_PB_SVrefine2PB10Xhap12_14069:HG2_PB_SVrefine2PBcRplusDovetail_6859:HG2_PB_assemblyticsfalcon_16371:HG3_Ill_150bpfermikitraw_23577:HG3_Ill_250bpfermikitraw_24294:HG3_Ill_GATKHCSBGrefine_12351:HG3_Ill_GATKHC_30000:HG3_Ill_Krunchall_24858:HG3_Ill_SVrefine2DISCOVARDovetail_13511:HG3_Ill_manta_4132:HG3_Ill_svaba_23657:HG3_PB_SVrefine2PBcRDovetail_9477:HG4_Ill_250bpfermikitraw_24633:HG4_Ill_GATKHCSBGrefine_12936:HG4_Ill_GATKHC_30040:HG4_Ill_Krunchall_25660:HG4_Ill_SVrefine2DISCOVARDovetail_13312:HG4_Ill_svaba_23347:HG4_PB_SVrefine2Falcon1Dovetail_12007;NumExactMatchSVs=28;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.0925926;PBcalls=11;Illcalls=22;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=22;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=11;HG4count=9;NumTechs=2;NumTechsExact=2;SVLEN=-55;DistBack=5172;DistForward=37;DistMin=37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=92;REFWIDENED=21:45583195-45583341;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2341.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:54:1/1:1:24:0:8:./.:0:3:0:5:1/1:0:48:./.:.:.:.:.:.
chr21	45635347	HG3_Ill_MetaSV_3186	CGCCCCGAGGCGGCCGGGTTACAGCTTGACTGAGTGGCCCCGAGGCGGCCGGGTTACAGCCTGAGTGAGTGGCCCCGAGGCGGCCGGGTTACAGCTTGACTGAGTG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9533:HG3_Ill_Krunchall_24861:HG2_PB_pbsv_19256:HG3_Ill_svaba_23659:HG3_Ill_manta_4133:HG3_Ill_MetaSV_3186:HG3_Ill_GATKHCSBGrefine_12352:HG3_10X_allpass_3566:HG2_Ill_svaba_23440:HG2_Ill_manta_5091:HG2_Ill_SpiralSDKrefine_10304:HG2_Ill_MetaSV_3028:HG2_Ill_GATKHCSBGrefine_12519:HG3_PB_pbsv_18945:HG3_Ill_SVrefine2DISCOVARDovetail_13512;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12519:HG2_Ill_MetaSV_3028:HG2_Ill_SpiralSDKrefine_10304:HG2_Ill_manta_5091:HG2_Ill_svaba_23440:HG3_10X_allpass_3566:HG3_Ill_GATKHCSBGrefine_12352:HG3_Ill_MetaSV_3186:HG3_Ill_manta_4133:HG3_Ill_svaba_23659;NumExactMatchSVs=10;ClusterMaxShiftDist=0.00952381;ClusterMaxSizeDiff=0.00947867;ClusterMaxEditDist=0.0380952;PBcalls=3;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-105;DistBack=4402;DistForward=-77;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=70;REFWIDENED=21:45635336-45635510;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2342.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:22:0|1:30:3:0:17:1|0:0:16:18:0:0/1:31:17:./.:.:.:.:.:.
chr21	45755814	HG2_Ill_250bpfermikitraw_25014	ACTCAGCCAGTGTGCCCAGGGTGAATGCCCAGGGCCTGAGGGGAGCGGCCCTG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7395:HG3_PB_HySA_28681:HG3_PB_pbsv_18948:HG2_PB_pbsv_19259:HG2_PB_assemblyticsPBcR_15889:HG2_Ill_250bpfermikitraw_25014:HG2_Ill_SVrefine2DISCOVARplusDovetail_7926;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25014:HG2_PB_assemblyticsPBcR_15889;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0377358;ClusterMaxSizeDiff=0.0377358;ClusterMaxEditDist=0.113208;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-52;DistBack=1412;DistForward=-52;DistMin=-52;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=208;REFWIDENED=21:45755793-45756052;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2343.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:36:0|1:20:0:0:35:./.:0:1:0:1:0/1:12:8:./.:.:.:.:.:.
chr21	45824707	HG2_Ill_GATKHCSBGrefine_12521	GTAGTGATGATAGTGACAGTGATAGTGATGATAGTGACAGTGACTGTGATGATAGTGGATAGTGATATGACAGTGATGGTGACAGCAAGGA	G	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_13515:HG2_PB_pbsv_19261:HG3_PB_pbsv_18949:HG3_Ill_250bpfermikitraw_24298:HG2_Ill_GATKHCSBGrefine_12521:HG2_Ill_250bpfermikitraw_25017:HG3_PB_HySA_28686;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25017:HG2_Ill_GATKHCSBGrefine_12521:HG3_Ill_250bpfermikitraw_24298;NumExactMatchSVs=3;ClusterMaxShiftDist=0.105263;ClusterMaxSizeDiff=0.105263;ClusterMaxEditDist=0.147368;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-90;DistBack=72;DistForward=22;DistMin=22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=356;REFWIDENED=21:45824520-45824965;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2344.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:14:./.:0:3:17:8:./.:0:0:1:0:0/1:10:4:./.:.:.:.:.:.
chr21	45850285	HG3_PB_SVrefine2PBcRDovetail_9484	TGAGCAAGTGGATTTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTTCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	T	20	PASS	ClusterIDs=HG2_Ill_Spiral_1224:HG3_Ill_Krunchall_24866:HG2_Ill_Krunchall_25340:HG4_Ill_Krunchall_25665:HG3_Ill_Krunchall_24865:HG2_Ill_Krunchall_25339:HG4_PB_pbsv_19199:HG4_Ill_MetaSV_3141:HG3_Ill_MetaSV_3187:HG2_Ill_tnscope_1995:HG2_Ill_MetaSV_3030:HG4_PB_SVrefine2PBcRDovetail_9708:HG4_PB_SVrefine2Falcon1Dovetail_12011:HG4_Ill_scalpel_17297:HG4_Ill_manta_4313:HG4_Ill_GATKHCSBGrefine_12941:HG4_10X_allpass_3420:HG3_PB_pbsv_18954:HG3_PB_SVrefine2PBcRDovetail_9484:HG3_PB_SVrefine2Falcon1Dovetail_11991:HG3_Ill_scalpel_18052:HG3_Ill_manta_4134:HG3_Ill_GATKHCSBGrefine_12355:HG3_10X_allpass_3571:HG2_PB_pbsv_19265:HG2_PB_SVrefine2PBcRplusDovetail_6865:HG2_PB_SVrefine2PB10Xhap12_14077:HG2_PB_SVrefine2Falcon2Bionano_9536:HG2_PB_SVrefine2Falcon1plusDovetail_7397:HG2_Ill_scalpel_17705:HG2_Ill_manta_5092:HG2_Ill_SVrefine2DISCOVARplusDovetail_7931:HG2_Ill_GATKHCSBGrefine_12525:HG2_10X_allpass_2905:HG2_10X_SVrefine210Xhap12_13461:HG2_Ill_breakscan11_2749;NumClusterSVs=36;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13461:HG2_10X_allpass_2905:HG2_Ill_GATKHCSBGrefine_12525:HG2_Ill_SVrefine2DISCOVARplusDovetail_7931:HG2_Ill_manta_5092:HG2_Ill_scalpel_17705:HG2_PB_SVrefine2Falcon1plusDovetail_7397:HG2_PB_SVrefine2Falcon2Bionano_9536:HG2_PB_SVrefine2PB10Xhap12_14077:HG2_PB_SVrefine2PBcRplusDovetail_6865:HG2_PB_pbsv_19265:HG3_10X_allpass_3571:HG3_Ill_GATKHCSBGrefine_12355:HG3_Ill_manta_4134:HG3_Ill_scalpel_18052:HG3_PB_SVrefine2Falcon1Dovetail_11991:HG3_PB_SVrefine2PBcRDovetail_9484:HG3_PB_pbsv_18954:HG4_10X_allpass_3420:HG4_Ill_GATKHCSBGrefine_12941:HG4_Ill_manta_4313:HG4_Ill_scalpel_17297:HG4_PB_SVrefine2Falcon1Dovetail_12011:HG4_PB_SVrefine2PBcRDovetail_9708;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0184615;ClusterMaxSizeDiff=0.0184615;ClusterMaxEditDist=0.0185185;PBcalls=11;Illcalls=21;TenXcalls=4;CGcalls=0;PBexactcalls=10;Illexactcalls=10;TenXexactcalls=4;CGexactcalls=0;HG2count=17;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-326;DistBack=1123;DistForward=9572;DistMin=1123;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=21:45850286-45850627;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2345.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:52:1/1:1:30:1:11:1/1:0:13:0:21:1/1:0:42:0/1:3:7:.:.:.
chr21	46153266	HG2_Ill_manta_5094	GCCCCATTCTGAAGCTGCCTAGGGCCCCGCCTCCTGCCTTGGTCTTTCTAGCCACCAGCACCCCATCCTGAAGCTGGCTAGGGCCCCACCTCCAGTCATCTGTCTTGGTCTTTCTAGCCACCAGCACCCCATCCTGAACCTGGTTAGGGCCTCACCTCCAGGCATCTGCCTTAATCTTTCTGCCACCAGCA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13469:HG3_Ill_Krunchall_24875:HG3_PB_pbsv_18959:HG2_PB_pbsv_19270:HG3_Ill_scalpel_18062:HG3_Ill_MetaSV_3191:HG3_Ill_GATKHC_30025:HG3_Ill_GATKHCSBGrefine_12358:HG3_10X_allpass_3572:HG2_Ill_scalpel_17714:HG2_Ill_manta_5094:HG2_Ill_MetaSV_3034:HG2_Ill_GATKHC_30116:HG2_Ill_GATKHCSBGrefine_12527:HG2_10X_allpass_2906:HG3_PB_SVrefine2PBcRDovetail_9487:HG2_PB_SVrefine2PB10Xhap12_14082:HG2_PB_SVrefine2PBcRplusDovetail_6869:HG2_PB_SVrefine2PB10Xhap12_14081;NumClusterSVs=19;ExactMatchIDs=HG2_10X_allpass_2906:HG2_Ill_GATKHCSBGrefine_12527:HG2_Ill_GATKHC_30116:HG2_Ill_MetaSV_3034:HG2_Ill_manta_5094:HG2_Ill_scalpel_17714:HG3_10X_allpass_3572:HG3_Ill_GATKHCSBGrefine_12358:HG3_Ill_GATKHC_30025:HG3_Ill_MetaSV_3191:HG3_Ill_scalpel_18062;NumExactMatchSVs=11;ClusterMaxShiftDist=0.00526316;ClusterMaxSizeDiff=0.00524934;ClusterMaxEditDist=0.0736842;PBcalls=6;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-190;DistBack=5770;DistForward=8058;DistMin=5770;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=124;REFWIDENED=21:46153176-46153489;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2346.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:32:0|1:36:1:2:29:./.:27:6:0:13:0/1:23:16:./.:.:.:.:.:.
chr21	46184082	HG4_PB_HySA_27649	ACACCCTGCACACCCAGGCACCCAGCACACCCGGGCACCCAGCACACCCGGGCATCCAGCACACCCGGGACACCCGGCACACCCAGG	A	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23543:HG2_PB_assemblyticsfalcon_16394:HG2_PB_SVrefine2Falcon1plusDovetail_7400:HG2_PB_PB10Xdip_19062:HG2_PB_pbsv_19272:HG4_PB_pbsv_19204:HG3_PB_pbsv_18961:HG3_PB_assemblyticsfalcon_16335:HG4_PB_HySA_27649:HG4_Ill_150bpfermikitraw_23709:HG2_PB_assemblyticsPBcR_15911;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23543:HG4_PB_HySA_27649:HG4_Ill_150bpfermikitraw_23709:HG2_PB_assemblyticsPBcR_15911;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.045977;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-86;DistBack=-114;DistForward=102;DistMin=-114;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=91;REFWIDENED=21:46184081-46184260;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2347.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:37:0|1:34:1:2:35:./.:1:2:10:0:./.:0:0:./.:.:.:.:.:.
chr21	46254179	HG4_Ill_GATKHC_30063	GAATATGCCTTTCCGTGCACGGAGAGACCTCCACGCCAACACTGGTGAAGGA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23545:HG4_PB_HySA_27651:HG4_PB_assemblyticsfalcon_16108:HG4_PB_pbsv_19207:HG2_PB_pbsv_19275:HG4_Ill_svaba_23371:HG4_Ill_manta_4314:HG4_Ill_Krunchall_25675:HG4_Ill_GATKHC_30063:HG4_Ill_GATKHCSBGrefine_12947:HG4_Ill_250bpfermikitraw_24652:HG4_Ill_150bpfermikitraw_23711:HG2_PB_assemblyticsfalcon_16399:HG2_PB_assemblyticsPBcR_15914:HG2_PB_HySA_34780:HG2_Ill_svaba_23462:HG2_Ill_manta_5095:HG2_Ill_SpiralSDKrefine_10316:HG2_Ill_Krunchall_25351:HG2_Ill_GATKHC_30121:HG2_Ill_GATKHCSBGrefine_12530:HG2_Ill_250bpfermikitraw_25030;NumClusterSVs=22;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23545:HG4_Ill_svaba_23371:HG4_Ill_manta_4314:HG4_Ill_Krunchall_25675:HG4_Ill_GATKHC_30063:HG4_Ill_GATKHCSBGrefine_12947:HG4_Ill_250bpfermikitraw_24652:HG4_Ill_150bpfermikitraw_23711:HG2_PB_assemblyticsfalcon_16399:HG2_PB_assemblyticsPBcR_15914:HG2_PB_HySA_34780:HG2_Ill_svaba_23462:HG2_Ill_manta_5095:HG2_Ill_SpiralSDKrefine_10316:HG2_Ill_Krunchall_25351:HG2_Ill_GATKHC_30121:HG2_Ill_GATKHCSBGrefine_12530:HG2_Ill_250bpfermikitraw_25030;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0392157;PBcalls=7;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=8904;DistForward=1963;DistMin=1963;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=135;REFWIDENED=21:46254136-46254321;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2348.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:28:0|1:20:1:4:27:1|0:1:10:18:0:0/1:28:33:./.:.:.:.:.:.
chr21	46528631	HG4_Ill_svaba_23383	TTTCTTAGGATGGCTCTGTATTCATTATGGATTTCATAAGTCACATGGCTGGAAGGTACCTGATA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_19282:HG4_PB_HySA_27669:HG2_PB_HySA_34798:HG2_PB_pbsv_19291:HG4_PB_pbsv_19226:HG3_PB_pbsv_18978:HG4_PB_SVrefine2PBcRDovetail_9721:HG4_PB_SVrefine2Falcon1Dovetail_12025:HG4_Ill_svaba_23383:HG4_Ill_scalpel_17310:HG4_Ill_manta_4315:HG4_Ill_SVrefine2DISCOVARDovetail_13321:HG4_Ill_Krunchall_25683:HG4_Ill_GATKHCSBGrefine_12952:HG4_Ill_250bpfermikitraw_24665:HG4_Ill_150bpfermikitraw_23720:HG3_PB_SVrefine2PBcRDovetail_9496:HG3_PB_SVrefine2Falcon1Dovetail_12006:HG3_PB_HySA_28726:HG3_Ill_svaba_23695:HG3_Ill_scalpel_18068:HG3_Ill_manta_4136:HG3_Ill_SVrefine2DISCOVARDovetail_13527:HG3_Ill_Krunchall_24883:HG3_Ill_GATKHCSBGrefine_12363:HG3_Ill_250bpfermikitraw_24319:HG3_Ill_150bpfermikitraw_23599:HG2_PB_SVrefine2PBcRplusDovetail_6881:HG2_PB_SVrefine2PB10Xhap12_14098:HG2_PB_SVrefine2Falcon2Bionano_9550:HG2_PB_SVrefine2Falcon1plusDovetail_7412:HG2_Ill_svaba_23472:HG2_Ill_scalpel_17720:HG2_Ill_manta_5096:HG2_Ill_SpiralSDKrefine_10322:HG2_Ill_SVrefine2DISCOVARplusDovetail_7942:HG2_Ill_GATKHCSBGrefine_12533:HG2_Ill_250bpfermikitraw_25040:HG2_Ill_150bpfermikitraw_23552:HG2_10X_SVrefine210Xhap12_13480;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13480:HG2_Ill_150bpfermikitraw_23552:HG2_Ill_250bpfermikitraw_25040:HG2_Ill_GATKHCSBGrefine_12533:HG2_Ill_SVrefine2DISCOVARplusDovetail_7942:HG2_Ill_SpiralSDKrefine_10322:HG2_Ill_manta_5096:HG2_Ill_scalpel_17720:HG2_Ill_svaba_23472:HG2_PB_SVrefine2Falcon1plusDovetail_7412:HG2_PB_SVrefine2Falcon2Bionano_9550:HG2_PB_SVrefine2PB10Xhap12_14098:HG2_PB_SVrefine2PBcRplusDovetail_6881:HG3_Ill_150bpfermikitraw_23599:HG3_Ill_250bpfermikitraw_24319:HG3_Ill_GATKHCSBGrefine_12363:HG3_Ill_Krunchall_24883:HG3_Ill_SVrefine2DISCOVARDovetail_13527:HG3_Ill_manta_4136:HG3_Ill_scalpel_18068:HG3_Ill_svaba_23695:HG3_PB_HySA_28726:HG3_PB_SVrefine2Falcon1Dovetail_12006:HG3_PB_SVrefine2PBcRDovetail_9496:HG4_Ill_150bpfermikitraw_23720:HG4_Ill_250bpfermikitraw_24665:HG4_Ill_GATKHCSBGrefine_12952:HG4_Ill_Krunchall_25683:HG4_Ill_SVrefine2DISCOVARDovetail_13321:HG4_Ill_manta_4315:HG4_Ill_scalpel_17310:HG4_Ill_svaba_23383:HG4_PB_SVrefine2Falcon1Dovetail_12025:HG4_PB_SVrefine2PBcRDovetail_9721;NumExactMatchSVs=34;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.0775194;PBcalls=14;Illcalls=25;TenXcalls=1;CGcalls=0;PBexactcalls=9;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-64;DistBack=2547;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=64;REFWIDENED=21:46528632-46528759;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2349.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:65:./.:0:0:0:0:./.:0:0:0:0:1/1:0:54:./.:.:.:.:.:.
chr21	46750519	HG4_Ill_GATKHC_30082	CCAGGGCCTCAGGGTGGAGGATGGTCAGGACTCAGGGCCTCAGGGTGGGTGGTCAGGGCCCAGGGCCTCAGGGTGAAGGGGGGTCAGGGCT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7945:HG2_PB_pbsv_19297:HG4_Ill_svaba_23386:HG4_Ill_Krunchall_25686:HG4_Ill_GATKHC_30082:HG4_Ill_GATKHCSBGrefine_12955:HG4_Ill_250bpfermikitraw_24669:HG4_Ill_150bpfermikitraw_23723:HG2_Ill_svaba_23476:HG2_Ill_Krunchall_25361:HG2_Ill_GATKHCSBGrefine_12534:HG2_Ill_250bpfermikitraw_25044:HG4_PB_pbsv_19231:HG4_Ill_SVrefine2DISCOVARDovetail_13325:HG2_PB_SVrefine2Falcon2Bionano_9555;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25044:HG2_Ill_GATKHCSBGrefine_12534:HG2_Ill_Krunchall_25361:HG2_Ill_svaba_23476:HG4_Ill_150bpfermikitraw_23723:HG4_Ill_250bpfermikitraw_24669:HG4_Ill_GATKHCSBGrefine_12955:HG4_Ill_GATKHC_30082:HG4_Ill_Krunchall_25686:HG4_Ill_svaba_23386;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0223464;ClusterMaxSizeDiff=0.0222222;ClusterMaxEditDist=0.0555556;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-90;DistBack=-1;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=164;REFWIDENED=21:46750484-46750737;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2350.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:19:0|1:19:0:0:19:./.:6:1:0:5:0/1:30:18:./.:.:.:.:.:.
chr21	46785156	HG3_Ill_250bpfermikitraw_24327	ACCAGCGTCACCGGGCCATAGTGAGCGGCCAAGCCAGCGTCACCGGGCCATAGTGAGCGGCCAAG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13485:HG2_PB_pbsv_19301:HG3_PB_pbsv_18987:HG3_Ill_svaba_23707:HG3_Ill_Krunchall_24891:HG3_Ill_GATKHC_30048:HG3_Ill_GATKHCSBGrefine_12366:HG3_Ill_250bpfermikitraw_24327:HG2_PB_SVrefine2PBcRplusDovetail_6888:HG2_PB_SVrefine2PB10Xhap12_14106:HG2_PB_SVrefine2Falcon1plusDovetail_7418:HG2_Ill_svaba_23479:HG2_Ill_SpiralSDKrefine_10326:HG2_Ill_Krunchall_25363:HG2_Ill_GATKHC_30137:HG2_Ill_GATKHCSBGrefine_12535:HG2_Ill_250bpfermikitraw_25046:HG2_Ill_150bpfermikitraw_23557;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13485:HG3_PB_pbsv_18987:HG3_Ill_svaba_23707:HG3_Ill_Krunchall_24891:HG3_Ill_GATKHC_30048:HG3_Ill_GATKHCSBGrefine_12366:HG3_Ill_250bpfermikitraw_24327:HG2_PB_SVrefine2PBcRplusDovetail_6888:HG2_PB_SVrefine2PB10Xhap12_14106:HG2_PB_SVrefine2Falcon1plusDovetail_7418:HG2_Ill_svaba_23479:HG2_Ill_SpiralSDKrefine_10326:HG2_Ill_Krunchall_25363:HG2_Ill_GATKHC_30137:HG2_Ill_GATKHCSBGrefine_12535:HG2_Ill_250bpfermikitraw_25046:HG2_Ill_150bpfermikitraw_23557;NumExactMatchSVs=17;ClusterMaxShiftDist=0.0155039;ClusterMaxSizeDiff=0.0155039;ClusterMaxEditDist=0.0155039;PBcalls=5;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=6;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-64;DistBack=5028;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=25;REFWIDENED=21:46785155-46785246;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2351.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:28:0|1:30:0:3:23:./.:0:4:5:0:0/1:26:28:./.:.:.:.:.:.
chr21	46795933	HG2_Ill_scalpel_17725	AGCCTGGAGGTGGCCTGGAGATGATGGCCTGGAGGTGGCCTGGAAATGATGGCCTGGAAGTGGCCTGGAGGTGGCCTGGAGATGATG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7948:HG3_PB_HySA_28743:HG2_PB_pbsv_19302:HG3_PB_pbsv_18988:HG3_Ill_svaba_23708:HG3_Ill_scalpel_18076:HG3_Ill_Krunchall_24892:HG3_Ill_GATKHC_30049:HG3_Ill_GATKHCSBGrefine_12367:HG3_Ill_250bpfermikitraw_24328:HG3_Ill_150bpfermikitraw_23607:HG2_Ill_svaba_23480:HG2_Ill_scalpel_17725:HG2_Ill_manta_5097:HG2_Ill_GATKHC_30138:HG2_Ill_GATKHCSBGrefine_12536:HG2_Ill_250bpfermikitraw_25047:HG2_Ill_150bpfermikitraw_23558:HG3_PB_SVrefine2PBcRDovetail_9501:HG3_Ill_SVrefine2DISCOVARDovetail_13530:HG2_PB_SVrefine2PBcRplusDovetail_6889:HG2_PB_SVrefine2PB10Xhap12_14107:HG2_PB_SVrefine2Falcon1plusDovetail_7419;NumClusterSVs=23;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23558:HG2_Ill_250bpfermikitraw_25047:HG2_Ill_GATKHCSBGrefine_12536:HG2_Ill_GATKHC_30138:HG2_Ill_manta_5097:HG2_Ill_scalpel_17725:HG2_Ill_svaba_23480:HG3_Ill_150bpfermikitraw_23607:HG3_Ill_250bpfermikitraw_24328:HG3_Ill_GATKHCSBGrefine_12367:HG3_Ill_GATKHC_30049:HG3_Ill_Krunchall_24892:HG3_Ill_scalpel_18076:HG3_Ill_svaba_23708;NumExactMatchSVs=14;ClusterMaxShiftDist=0.130435;ClusterMaxSizeDiff=0.130435;ClusterMaxEditDist=0.173913;PBcalls=7;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=14;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=11;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-86;DistBack=-65;DistForward=-75;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=177;REFWIDENED=21:46795840-46796102;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2352.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:28:0|1:17:1:4:25:1|0:0:8:11:1:0/1:6:3:./.:.:.:.:.:.
chr21	47322167	HG2_Ill_GATKHCSBGrefine_12549	ACTGCAGACACTGGGGCCAGTGTTCCCCTATCGTAGGTGGCCTGGCCTCCAAGGCTGGACG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13499:HG4_PB_assemblyticsfalcon_16175:HG4_Ill_Spiral_1453:HG2_PB_HySA_34876:HG2_PB_pbsv_19341:HG3_PB_pbsv_19035:HG3_PB_assemblyticsfalcon_16402:HG4_PB_pbsv_19281:HG2_PB_HySA_34875:HG2_PB_assemblyticsfalcon_16470:HG4_Ill_svaba_23418:HG4_Ill_scalpel_17326:HG4_Ill_Krunchall_25702:HG4_Ill_GATKHCSBGrefine_12973:HG3_PB_assemblyticsfalcon_16401:HG3_Ill_svaba_23735:HG3_Ill_manta_4141:HG3_Ill_Krunchall_24907:HG3_Ill_GATKHC_30093:HG3_Ill_GATKHCSBGrefine_12380:HG3_Ill_250bpfermikitraw_24348:HG3_Ill_150bpfermikitraw_23625:HG2_PB_assemblyticsPBcR_15972:HG2_Ill_svaba_23506:HG2_Ill_manta_5104:HG2_Ill_SpiralSDKrefine_10342:HG2_Ill_Krunchall_25380:HG2_Ill_GATKHC_30174:HG2_Ill_GATKHCSBGrefine_12549:HG2_Ill_250bpfermikitraw_25071:HG2_Ill_150bpfermikitraw_23581:HG4_PB_SVrefine2PBcRDovetail_9739:HG4_Ill_SVrefine2DISCOVARDovetail_13334:HG2_PB_SVrefine2Falcon1plusDovetail_7446;NumClusterSVs=34;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23581:HG2_Ill_250bpfermikitraw_25071:HG2_Ill_GATKHCSBGrefine_12549:HG2_Ill_GATKHC_30174:HG2_Ill_Krunchall_25380:HG2_Ill_SpiralSDKrefine_10342:HG2_Ill_manta_5104:HG2_Ill_svaba_23506:HG2_PB_assemblyticsPBcR_15972:HG3_Ill_150bpfermikitraw_23625:HG3_Ill_250bpfermikitraw_24348:HG3_Ill_GATKHCSBGrefine_12380:HG3_Ill_GATKHC_30093:HG3_Ill_Krunchall_24907:HG3_Ill_manta_4141:HG3_Ill_svaba_23735:HG3_PB_assemblyticsfalcon_16401:HG4_Ill_GATKHCSBGrefine_12973:HG4_Ill_Krunchall_25702:HG4_Ill_scalpel_17326:HG4_Ill_svaba_23418;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0327869;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0491803;PBcalls=12;Illcalls=21;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-60;DistBack=533;DistForward=-61;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=21:47322143-47322273;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2354.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:59:1/1:2:47:2:8:./.:0:0:0:0:1/1:0:37:./.:.:.:.:.:.
chr21	47417051	HG2_Ill_scalpel_17748	CGGGCGCCCACCAAAGTCATCTGGGAGAGGCTTCACCCCTCCGTGGGGGCCTGAGGCACCAGCT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_14143:HG2_PB_HySA_34889:HG2_PB_pbsv_19350:HG4_Ill_Spiral_1454:HG4_PB_pbsv_19293:HG4_PB_HySA_27729:HG4_Ill_svaba_23426:HG4_Ill_scalpel_17332:HG4_Ill_Krunchall_25706:HG4_Ill_GATKHC_30119:HG4_Ill_GATKHCSBGrefine_12979:HG4_Ill_Cortex_2196:HG4_Ill_250bpfermikitraw_24693:HG4_Ill_150bpfermikitraw_23743:HG2_Ill_svaba_23513:HG2_Ill_scalpel_17748:HG2_Ill_manta_5107:HG2_Ill_breakscan11_2771:HG2_Ill_SpiralSDKrefine_10343:HG2_Ill_Krunchall_25382:HG2_Ill_GATKHC_30182:HG2_Ill_GATKHCSBGrefine_12554:HG2_Ill_Cortex_5214:HG2_Ill_250bpfermikitraw_25077:HG2_Ill_150bpfermikitraw_23585:HG2_Ill_Spiral_1225:HG2_PB_SVrefine2PBcRplusDovetail_6917;NumClusterSVs=27;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23585:HG2_Ill_250bpfermikitraw_25077:HG2_Ill_Cortex_5214:HG2_Ill_GATKHCSBGrefine_12554:HG2_Ill_GATKHC_30182:HG2_Ill_Krunchall_25382:HG2_Ill_SpiralSDKrefine_10343:HG2_Ill_breakscan11_2771:HG2_Ill_manta_5107:HG2_Ill_scalpel_17748:HG2_Ill_svaba_23513:HG4_Ill_150bpfermikitraw_23743:HG4_Ill_250bpfermikitraw_24693:HG4_Ill_Cortex_2196:HG4_Ill_GATKHCSBGrefine_12979:HG4_Ill_GATKHC_30119:HG4_Ill_Krunchall_25706:HG4_Ill_scalpel_17332:HG4_Ill_svaba_23426;NumExactMatchSVs=19;ClusterMaxShiftDist=0.0472441;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.15873;PBcalls=6;Illcalls=21;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=19;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=0;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=-63;DistBack=6550;DistForward=-25;DistMin=-25;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=110;REFWIDENED=21:47416957-47417129;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2355.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:22:0|1:25:1:6:20:0|1:11:0:0:9:0/1:33:15:./.:.:.:.:.:.
chr21	47657351	HG3_10X_allpass_3577	CTCTGTTGGCCAGGCCGGAGTGCAGTGTTACAATCTTGGCTCACTGCAACCTTGACCTCCCAAGCTCAAATGATCTCACCTCAGCCTCCCAAATACCTGGGACTAGAGGCGCATGCCACCCAGCTAATTTTTGTATTTTTTTGTAGAAACGGGATTTTGCTGTATTGTCAGGCTAGTCTACAACTCCTGAACTCAAGTGATGTGCACACCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGTCACCACACCCAGCCTTAAGCCTTTGCTTTTTACTAAGAATATAACTAAGTTATGACATCAACTGAGAAGCAGAAATGTACTTATTAAAAATTTAACAACTTCCTATGATAAAGCTTAATTTAAAAAAAAAAACTAGGCTGGGCTCGGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCCGAGGCGGGCAGATCACCTGAGGTCAGGAGTTCAAGATCAGCCTGATCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGACACGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAACTGCCTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAGATCACGCCATTGCACTCCAGCCAGGGCAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAAAAAAAATTAGAGAAACCACTTCCCTTTAATTTATAAATCCAATTCCAATTTATATTTAATGAAAAAGGTGGTATTAATCCAAAAACAACTGCTTCGATGTGTTACTTAACATTACTTGTAATTGTCTTGTTTGGCTTATCTTATTTAATTTACTTTGGTTTTATGCATCTATAATTAATTCTTCTGACATTTTCCAAATGAGTGGATTGCTGCTTATAGCTTAAAATTAACTCAAAATAATATCCCACTGCCACCTAACATACTCTAGAGCTGTCTACTTCCATATACCGGTCTTTTCAAGAAAAACAATCTTGGCCAGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACTGCGTCTCTACTAAAAATACAAAAATCAGCCAGGCATGGTGATGGGTACCTGTAGTCCCAGCTACTTGGGAGGCTGGGGCAGGAGAACTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGTCGAGATTGTGCCACTGCACTCTAGCCTGGGCAACAGAGCGAGACTCTATCTAATAAAAAGGAAAAAAAAATCTCATCCCAAACCACTTAAATTATAGAGACTGA	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3199:HG4_10X_allpass_3426:HG2_Ill_tnscope_1997:HG4_PB_pbsv_19328:HG4_PB_SVrefine2PBcRDovetail_9754:HG4_PB_SVrefine2Falcon1Dovetail_12080:HG4_Ill_SVrefine2DISCOVARDovetail_13345:HG4_Ill_MetaSV_3157:HG4_Ill_GATKHCSBGrefine_12987:HG3_PB_assemblyticsfalcon_16437:HG3_PB_SVrefine2PBcRDovetail_9540:HG3_PB_SVrefine2Falcon1Dovetail_12068:HG3_Ill_SVrefine2DISCOVARDovetail_13548:HG3_Ill_GATKHCSBGrefine_12390:HG3_10X_allpass_3577:HG2_PB_pbsv_19392:HG2_PB_SVrefine2PB10Xhap12_14170:HG2_PB_SVrefine2Falcon2Bionano_9602:HG2_Ill_breakscan11_2775:HG2_Ill_SpiralSDKrefine_10353:HG2_Ill_SVrefine2DISCOVARplusDovetail_7968:HG2_Ill_MetaSV_3045:HG2_10X_allpass_2910:HG2_10X_SVrefine210Xhap12_13518:HG3_Ill_Krunchall_24916:HG4_PB_assemblyticsfalcon_16199:HG3_PB_pbsv_19074;NumClusterSVs=27;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13518:HG2_10X_allpass_2910:HG2_Ill_MetaSV_3045:HG2_Ill_SVrefine2DISCOVARplusDovetail_7968:HG2_Ill_SpiralSDKrefine_10353:HG2_Ill_breakscan11_2775:HG2_PB_SVrefine2Falcon2Bionano_9602:HG2_PB_SVrefine2PB10Xhap12_14170:HG2_PB_pbsv_19392:HG3_10X_allpass_3577:HG3_Ill_GATKHCSBGrefine_12390:HG3_Ill_SVrefine2DISCOVARDovetail_13548:HG3_PB_SVrefine2Falcon1Dovetail_12068:HG3_PB_SVrefine2PBcRDovetail_9540:HG3_PB_assemblyticsfalcon_16437:HG4_Ill_GATKHCSBGrefine_12987:HG4_Ill_MetaSV_3157:HG4_Ill_SVrefine2DISCOVARDovetail_13345:HG4_PB_SVrefine2Falcon1Dovetail_12080:HG4_PB_SVrefine2PBcRDovetail_9754:HG4_PB_pbsv_19328;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0172997;ClusterMaxSizeDiff=0.0172997;ClusterMaxEditDist=0.0172997;PBcalls=11;Illcalls=12;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=10;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-1322;DistBack=8335;DistForward=-1322;DistMin=-1322;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=21:47657352-47658674;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2356.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:27:1|0:2:17:23:0:1|0:0:32:52:0:0/1:48:17:0/1:116:53:1299:.:.
chr22	17665782	HG4_Ill_Krunchall_25732	ACACTCTAGCCTGGGTGACAGAGGTGGAGGCTGTAGTGAGCTGTCATCACACCACCG	A	20	PASS	ClusterIDs=HG2_10X_allpass_2913:HG3_PB_pbsv_19100:HG4_PB_pbsv_19350:HG2_PB_pbsv_19415:HG4_Ill_svaba_23457:HG4_Ill_manta_4323:HG4_Ill_Krunchall_25732:HG4_Ill_GATKHC_30173:HG4_Ill_GATKHCSBGrefine_12998:HG4_Ill_250bpfermikitraw_24726:HG4_Ill_150bpfermikitraw_23777:HG3_Ill_svaba_23787:HG3_Ill_Krunchall_24941:HG3_Ill_GATKHC_30158:HG3_Ill_GATKHCSBGrefine_12403:HG3_Ill_250bpfermikitraw_24388:HG3_Ill_150bpfermikitraw_23661:HG3_10X_allpass_3581:HG2_Ill_svaba_23551:HG2_Ill_manta_5112:HG2_Ill_breakscan11_2780:HG2_Ill_SpiralSDKrefine_10374:HG2_Ill_Krunchall_25407:HG2_Ill_GATKHC_30235:HG2_Ill_GATKHCSBGrefine_12568:HG2_Ill_250bpfermikitraw_25122:HG2_Ill_150bpfermikitraw_23619;NumClusterSVs=27;ExactMatchIDs=HG2_10X_allpass_2913:HG4_Ill_svaba_23457:HG4_Ill_manta_4323:HG4_Ill_Krunchall_25732:HG4_Ill_GATKHC_30173:HG4_Ill_GATKHCSBGrefine_12998:HG4_Ill_250bpfermikitraw_24726:HG4_Ill_150bpfermikitraw_23777:HG3_Ill_svaba_23787:HG3_Ill_Krunchall_24941:HG3_Ill_GATKHC_30158:HG3_Ill_GATKHCSBGrefine_12403:HG3_Ill_250bpfermikitraw_24388:HG3_Ill_150bpfermikitraw_23661:HG3_10X_allpass_3581:HG2_Ill_svaba_23551:HG2_Ill_manta_5112:HG2_Ill_breakscan11_2780:HG2_Ill_SpiralSDKrefine_10374:HG2_Ill_Krunchall_25407:HG2_Ill_GATKHC_30235:HG2_Ill_GATKHCSBGrefine_12568:HG2_Ill_250bpfermikitraw_25122:HG2_Ill_150bpfermikitraw_23619;NumExactMatchSVs=24;ClusterMaxShiftDist=0.0178571;ClusterMaxSizeDiff=0.0176991;ClusterMaxEditDist=0.0357143;PBcalls=3;Illcalls=22;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=22;TenXexactcalls=2;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-56;DistBack=2088;DistForward=-29;DistMin=-29;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=22;REFWIDENED=22:17665781-17665861;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2360.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:37:1/1:2:14:0:12:./.:0:11:0:5:1/1:0:38:./.:.:.:.:.:.
chr22	17770351	HG2_PB_SVrefine2Falcon2Bionano_9610	AGCAGTTTGCCAGCTTTGCCATTTGTGTCCTGGTCTTGATATTTCGAGAAGGGTTTATTCCTTGTACATGCTGGGGTTACAGGTTTGCTCTTCGTACATAAACATGTGGCATGTGTATATTGCATGCCTATGCTACATGCAGCATAAACGTTGCTTTGAATAAATGTGGTCATTTATTAATTTGCCCACAAAAATTTATTGAGCACCTGCTCTGTGCAAGGCACTGACAAGTGTTCAGGGGAGACAAAATGGATAAAAAACAGACCTGCACTCTGAAGCAACACTAGGGTATTAGAGTGCAGCTCTTCAGGAGACGTAGAATGTGAACCACACAAGTAATTTTTAAAAAATCAAGTTGTTTGTTAGAGACGGAGTCTCGCTCTGTCGTCCAGGCTGGAGTGCAGTAGCGCAATCATAGCTCACAGCAGCCTCAGACTCCTGGACTCTGTGATCCTCCCCACTCAGACTTCCTAGTAGCTGGGATGCCAGGTCTGCACCACCACACTCAGCTAATTTAAAATTTTGTTTTGTAGAGGCAGAGTCTTGCTATGTTGCCTCGTCTGGTCTCGAACTTCTGGGCTCAAGTGATCCTCCTGCCTCTGTCTCCAAAAGTGCTGACATTACAGCTATGAGCCACCACGCTCAGCTGATTTTTAAAAATTATTAAGATATGTTATGTGTGTTTATTTTTCTCCAGTAAGCCTTCAAAATCCTATGTGCATTTCATACCTACAGCACATCTCAGTTTGGACTAGCCACATTGCAAGTGGCTTGTGACTTCTGTATTGGACAACACAATTTTAAAGTGTGCCTCTAAGCGTCAAGGTTAATGTCAAAGGGACTTCTGGGCAACCTCCACCCCACTGCCTCCCTTGGCTCCAGTCAGAGGCTGGTTGAAGCAGGGCTATGCCCAGGAGGCCAGCGTTTGTTCTGAGCTGCTCGTGACCCAGGAAGGCTGGCCATTCCCCATTCCCCTGATCCTGTGCCCAGCCAGAGGCTGCTGCAACCTCTAGCTGTGCAGCCTCAACAAACGCCCAATCAAACTTCCTCCCCAGGGGAAAGAAGCAAAAAGAGCCATTGCCTTTCTTCTTGGGTCCTGCAAGCTCACACAAAGTGGTAAGGCTGTTTGTTTCTTACCTTGGAAGTTCAGTTACAAATGACTTGCAGCTGTGAGTTGTTTTCAGGCTTTCTCTGGTGCCGTTGCCCCCGACACCCTCCACCCTCACTGTTGCTGTGTTTACTCACAGTAGTGGGCATCTGAGCCTTTTTTTTTTCTTTGTCCGGCATCCTTTCTTTTGGGAAATAGCCCCATCCCATAGACCACATTTCATGTAATTCTGGCGGGGGTGTCAGTCTTAGGGGCCAGCCCCACTCCTACCATGAAGGCGGACACTTGACCCATCCCACACCAATCAGAAGGGCTTTCCCTGGAATTTAAATATGGAGCAGGAGGTCAGGAGTGATGGCTCACACCTGTAGTCCTAGCACTTTGGGAGACCAAGGCGGGAGGAGCACTTGAGCCCAGGAGTTCGAGACCAGCTCTGGGCAACATAGTGAGACCCCGTCTCTACAAAAATACAAAAATTAGCTGGATGTGGTGGCACTCGCCTGCAGTCCCAGCTGTTTGGGAGGCCGAAGTGGGAGGATTGCCTGAGCTCAGGAGGTCAAGGCTGCAGTGAGCCAAAGTCACACCACTGTACTCCAGCCTGTGTGACAAGGGGAGACCCTGTCTCTCAAAAAAAAAAAAACCTTAAAAATGAAAATAAACAAATAAATAAAGATTGAGCAGAAACAGAGGGGCTGAAGACAATGTGGGGCCAGAGCCCAAGATCCATCTAAGTTGAGGCCTGTCCTTTTAAAGCCTGGTCGCTGAACTCTGCCTTTGATTCTACGAGCCCTCCTTCCTGTGCTCCCTCCTTTGCCCTCCTCCTTCCCAGTCAAGTTAGCCAGAATCCATTCCGGTTGCTTATAATAGAAGAATCCTGATAACAAATTTTTTTTTTTTTTGAGACTGACTTTCACTCCTGTTGCCCAGGCTAGAGTGCAATGGCACAATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTACAGGTGTGCACCACCACACCCAGCTACTTTTTGTATTTTTATTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGATCTCCTGACCTCAGATGATCTGCCCGCCTTGGCGTGTCAAAGTGCTGGGATTATAGGTGAGAGCTACCACTACCCGGACCTGGTAACAAAATTTTAATCTCAGTTTTACCAAAGAGAAAAAAGATACAGCAGTTAAATATATATATGAATATGGATATTACATTTATAATTTCTCTCTTTTTTTTAATTTCTCTCTCTCTTTTTTTTTTTTAGACAAGAGTCTCGCTCTGTCGCCCAGGCTGGAATGCAATGGCACGATCTTGGCTCACTACAACCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGAGCGCCACCACACCCAACTAATTTTTGTACTTTTAGTAGAGACCGGGTTTCACCATGTTGGCCAGAATGGTCTCCATCTCTTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAATGCTGGGATTACAGGCATGAGCCACCGCACCCGCCCTAGTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTTCAAGCTCCACCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCGAGTAGCTGGGACTACAGGCATTCGCCACCACGCCCAACTAATTTTTTGTAGTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGTCTCAATCTCCTGACCTGGTGATCCACCTGCCTCGGCCTCCCAAAATGCTGGGATTACAGGCATGAGCCACTGCACCTGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAAACAAGGAGCATTAGAAGTTTCCTATGCCTTACCATACTCTGAAGTCAGTATGTGTCCAGGTAAGATCACATCACCCGCCACCTCTGGCTCAGCAGCCAAGTGGCCAGCAGGATCCAGGAAAGAAGCAGGCAAACTTTTCTCTTGGCTGCTAAAGGAGAGGCTGCCCCTCGGGTAACTTCTTATGAGGCCAGCAGTGAGTTGCCCTTTTCCTCCTATTGAGGGACTGGATTTTGAATACTTCAGCACGGTGGCTCATGCTTATAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCGCTTGAGTCCAGGAATGGGAGGCCAGCCTGGGCAATGTGGCAAAACATTGTCTCTGCAATGGGCATGGTGGCCCACACATCTGTAGTCCCACCTACCTGGGTGGCTGAGGCAGGAGGATCGCTTGAGTCAGGGGGGTTGAGGCTGCAGTGAGCCATGATCACACCATTGCACTCCAGCCTGGGAGACAGAGCGAGATCCCATCTCAAAAAAAAAAAAATTGGTCTGTGATATTTTGATCAACTATGTAAAAACCAAAAAATAAGAGAATATTCTTCTGAAGTGTGATAATACATGACATCACAGCAGCTAACAATATAGGGGACAAGATCACTTGGCTTACAATGATTTTCACACAGAAAACCAGAAAGTAGTTTGAATCTTAAGGAAGAGAGCTGCATTTTAAAGTTTAACAGCAAGTTGGGGGTCAGGAGACCTGATTTTTTCCCCAGTTTGTGTGCTGCCACTTTACCAGTAGCGAGTCCTTGGGGATGCTACTAAAACTTTTTTTTTTTAATTATACTTTAAGTTCTAGGATACATGTGCACAACGTGCAGGTTTGTTACATATGTATACATGTGACATGTTGGTTTGATGCACCCATTAACTCGTCATTTACATTACCTATTTCTCCTAATGCTAACCCTCCCCCCAACCCCCCACCCCACAACAGGCCCTGGTGTGTGATGTTCCCCGCCCTGTGTCCAAGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTGTGGTTTTCTGTTCTTGTGACAGTTTGCTGAGAATGATGGTTTCCAGCTTTATCCATGTCCCTACAAAGGATATTAACTCATCTTTTTTTACGGCTGCATAGTATTCCGTGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGGTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAATCCTTTGGGTATATACCCAGTAATGGGATGGCTGGATCAAATGGTATTTCTAGTTCTAGATCCTTGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATCATCATTCTAACTGGTGTGAGATGGTATCTCACTGTAGTTTTGATTTGCATTTCTCTGATGACCAGTGATGATGAACATTTTTTCATGTGTCTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATATCCTTCGCCCACTCTTTGATGGGGTTGTTTGATTTTTTTCTTGTAAATTTGTTTAAGTTCTTTGTAGATTCTGGATATTAGCCCTTTGTCAGATGGGTAGATTGTAAAAATTTTCTCCCATTCTGTAAGTTGCCCGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCTATTTTGGCTTTTGTTGCCATTGCCTTTGGTGTTTTAGTCATGAAGTCCTTGCCCATGCCTGTGTCTTGAATGGTATTGCCTAGGTTTTCTTCTAGGGTTTTTACGGTTTTAGGTCTAACATTAAGTCTTTAATCCATCTTGAATTAATTTTTGTATAAGGTATAAAGAAGGGATCCAGTTTCAGCTTTCTACATGTGGCTGGCCAGTTTTCCCAGCACCATTTGTTAAATAGGGAATCCTTTCCCTATTTCTTTTTTTTGTCAGGTTTGTCAAAGGTCAGATGGTTGTAGATGTGTGGTGTTATTTCTGAGGGATCTTTTCTGTTCCATTGGTCTACATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGCAGTATAGTTTGAAGTCAGGTAGCGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGTCTTGGCAATGCGGGCTATTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTTTCCAGTTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATGTATAAATTACCTTGGGCAGTATGGCCACTTTCACAATATTGATTCTTCCTATCCATGAGCATGGGATGTTCTTCCATTTGTGTGTGTCCTCTTTTATTTCGTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGGTTCCTAGGTATTTTAATCTCTTTGTAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTCTGTTATTGGTGTATAGGAATCCTTGTGATTTTTGCACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTGGGGCTGAGACGATGGGGTTTTCTAAATATACAATCATGTCATCTGCAAACAGGGACAATTTGACTTCTTCATTTCCTAATTGAATACCCTTTATTTCTTTCTCTTGCCTGATTGCCTTGGCCATAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGCATGATATTGGCTGTGGGTTTTTCATAAATAGCTCTTACTATTTTGAGATATGTTCCATCAATACCTAGTTTATTGAGAGTTTTTAGGATGAAGGGCTGTTGAATTTTTTCAAAGGCCTTTTCTGCGTCTATTGAGATAATCATGTGGTTTTTGTCATTGGTTCTGTTTATGTGATGGATTACGTTTATTGATTTGCATATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCGACTTGATCTTGGTGGATAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAATATTTTATTGAGGATTTTCGCATTGATGTTCATCAGGGATATTGGTCTAAAATTCTCTTTCTTTGTTGTGTCTCTGCCAGGTTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGTAATAGTTTCAGAAGGAATGGTACCAGCTCTTCTTTGTACCTCTGGTAGAATTTGGCTGTGAATCCATCTGGTCCTGGACTTTATTTTGGTTGGTAGGCTATGAATTATTGCCTCAATTTCAGAGCCTGTTATTCGTCTATTCAGGGATTCAACCTCTTCCTGGTTTAGTCTTGGGTGGGTATATGTGTCCAGGAATTTATCCATTTCTTCTAAATTTTCTAGTTTATTTGCATAGAGGTGTTTATAGTATTCTCTGATGGTAATTTGTATTCCTGCGGGATTGGTGGTGATATCCCCTTTATCGTTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTCTTCTTTATTAGTCTTGCTAGTGGTATATCAATTTTGTTGATCTTTTGAAAAAACCAGCTCCTGGATTCATTGATTTTTTTGAAGGGTTTTTTGTGTCTCTATCTCCTTCAGTTCTGCTCTGATCTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATTTGTTTGCTCTTGCTTCTCTAGTTCTTTTAATTGTGATGTTAAGGTGTCGATTTTAGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTATAAATTTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTACGTTGTGTCTTTGTTCTCATTGGTTTCAAAGAACATCTTTTCTTTTTTTTTTTTTTGAGACAGATTCTTGCTCTGTTGCCCAGGCTGGAGTGCAATGCTGTGATCTTGGCTCACTGAAACCTCCGCCTCCCAAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCACCACTATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGGTCTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCGTCTTAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACCCCCAGCCTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATTTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGTGCAGTTTTGAGTGATTTTCTTAATCCTGAGTTCTAATTTGATTGCACTGTAGTCTGAGAGACAGGTTGTTGTGATTTCTGTCCTTTTACATTTGCTGAGGAGTGCTTTACTTCCAATTATGTGGTCAGTTTTAGAATAAGTGCAATGTGGTGCTGAGAAGAATGTATATTCTGTTGATGTGGAGAGTTCTGTAGATGTCTGTTAGGTCTGCTTGGTGCAGAGCTGAATTCAAGTCCTGGATATCCTTGTTAACCTTCTGTCTTGTTGATCTGTCTAATATTGACAGTGGGGTGTTAAAGTCTCCCATTATTATTGTGTGGGATTCTAAGTCTCTTTGTAGGTCTCTAAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTAGGTGCATATATATTTAGGATAGTTAGCTCTTCTCATTGAATTGATCCCTTTACCATTGTGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAATTCTGTTTTATCAAAGACTGGGATTGCAACCCCTGCTTTTTTATGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCCTTTATTTTGGGCCTATGTGTGTCTCTGCGTGTGAGATGGGTCTCCTGAATACAGCATACTGATGAGTTTTGACTCTTTGTCCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTAGCTCATTTACATTTAAGGTTAATATTGTTGTGTGTGAATTTGATCCTGTCATTATGATGTCAGCTGGTTATTTTTCCTGTTAGTTGATACAGTTTCTTCCTAGCATCGATGATCTTTACAATTTGGCATCTTTTTGCAGTGGCTGGTACCAGTCATTCCTTTCCATGTTTAGTGCTTCCTTCAGGAGCTGTTGTAAGGCAGGTCTGGTGGTGACAAATATCAGCATTTGCTTGTCTGTAAAGGATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCATTAAGAATGTTGAATATTGGCCCCCACCCTCTTCTGGCTTGTAGAGTTTCTGCTGAGACATCCGCCGTTAGTCTGATGGGCTTCCCTTTGTGGGTAACCTGGCCTTTCTCTCTGGCTGCCTTTAACACTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGGGTCTTGTGGTTGCTCTTCTCGCGGAGTATCTTTGTGGCATTCTCTGTATTTCCTGAATTTGAATGTTGGCCTGCCTTGCTAGGTTGGCGAAGTTCTCCTGGATAATATCCTGAAGAGCTTTTTCCAACTTGGTT	C	20	PASS	ClusterIDs=HG2_Ill_Krunchall_25412:HG3_PB_SVrefine2PBcRDovetail_9554:HG3_PB_SVrefine2Falcon1Dovetail_12082:HG3_Ill_SVrefine2DISCOVARDovetail_13567:HG2_PB_SVrefine2PBcRplusDovetail_6954:HG2_PB_SVrefine2PB10Xhap12_14189:HG2_PB_SVrefine2Falcon2Bionano_9610:HG2_Ill_SVrefine2DISCOVARplusDovetail_7982:HG2_10X_SVrefine210Xhap12_13531:HG3_PB_pbsv_19102:HG2_PB_pbsv_19417:HG3_10X_allpass_3582:HG2_Ill_tnscope_1999:HG2_10X_allpass_2914:HG3_PB_assemblyticsfalcon_16471:HG2_PB_assemblyticsfalcon_16528:HG2_PB_assemblyticsPBcR_16027:HG3_Ill_MetaSV_3208:HG2_Ill_MetaSV_3050:HG3_Ill_Krunchall_24946;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13531:HG2_Ill_SVrefine2DISCOVARplusDovetail_7982:HG2_PB_SVrefine2Falcon2Bionano_9610:HG2_PB_SVrefine2PB10Xhap12_14189:HG2_PB_SVrefine2PBcRplusDovetail_6954:HG3_Ill_SVrefine2DISCOVARDovetail_13567:HG3_PB_SVrefine2Falcon1Dovetail_12082:HG3_PB_SVrefine2PBcRDovetail_9554;NumExactMatchSVs=8;ClusterMaxShiftDist=0.000570939;ClusterMaxSizeDiff=0.000570939;ClusterMaxEditDist=0.000570939;PBcalls=10;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-8757;DistBack=-3010;DistForward=-5735;DistMin=-5735;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=22:17770351-17779108;PctSeqSimilarity=0.9999;PctSizeSimilarity=0.9999;PctRecOverlap=0.9999;SizeDiff=-1;StartDistance=1;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:65:50:1|0:0:24:55:3:0|1:52:0:0:22:0/1:57:19:0/1:374:159:8748:.:.
chr22	18057644	HG3_Ill_SVrefine2DISCOVARDovetail_13573	ATTTTTTTTTTTTTTTTTTTTGAGATGGAGGCTCGCTGTGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCCCTGCAAGTTCTGCCTCCCAGGTTCATGCCATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGACTACAAGCGCCCGCCACCACACCCGGCTAATTTTTTTGTATTTTTAGTGGAGACAGGTTTCACCGTGTTGGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCTGCCCACCTTGCCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATACCCGGCAGTGTCCTATCCATTTTTAAGGCAGCCACTTGGAGTTGGAGCATGTCTTTCTCTCATAATCTCTTACCAGATGTCTCAGAGCAGCCTGTGCACTTTAACTCCAGACATTCTGCCACTGAGCCCCCTAGAGCTCCAGCTTTTAAAGCACTTGGGGTGAGCCTCGAGAGATGACAGACGGAGCTGCCCAAGAGCTGCCAGCTGCCAACCCTGCCTGGGGCTTCACGGCCCGCGCCCTACTTCCTCTCAGCTGGCTCCACACCCTGGGGCGTGTAATTTCCAAATTCTCACTCCCAGGGCTAATTTGGGGGATAAGACATTTGATTAGAAGTATCAGAAACCAGCTGGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGTTATGACTAGAGGATCATTTGAACTCAGGAATTCAAGACCAGCCTGGATAACAGTGAGACCCCATCTCTACAAAATATAAACAATTATGTGAGCATGGTGGTGCACACCTGTAGTCCCTGTTCCTTGGGAGGCTGAGGCCGGAGGATCCCTTGAGCCCAGGAGTTCAAGGCTGCAGAGAGCTGCGATTGTGCCACTGCACACTAACCTGGGAGATAGAGCAAGAACTTGTCTCAGAAAAAAAAAGTATCAGGAACTAATCTCCAGTCCTATCAAGTTAGGCATAAGGTCAATGTGTGATAGCTGAGTGTCACAGAAACCAAGGACAGGAATGCAACTGCCACTGGGGATGAACTGGAAGTGGGGAGTTAAACCACCTCAGAATGTCCCCATTTTTGTTTCTTCTCCAGATGTGCTGCTTTGCTTTTCCGTATGTTTCTCTACGGACCAGCTACCTCTCCTCTGCCAACAGATCCAAGTTGTGCATGTTATGGGTCCAAACACCACGTGACAAGCCCATTCTTCCAGTTTCTCAGACCAGAAACTGCACTGTCCTCTAACTGCTTCTTCTCCCTCTTGCATCTGGTCCTTGGGGAAATCCTGTTTGCCCGGCCTTCAGCATATATCCACAGTTTAACCTTAACCACTCCTCGCCACCACTCGCGGGGGCGAGCAGCCTTCGCCCCCTGCCTAGATTACTACAGTAACTTCATTGTTCTTTCTACTTCTCTCTTTGCCCCTCTGCTATCTCAAAACAGCATCCAAAATGCACCTAGCAAGAGCATGTCATTCCTCTGCACAAAACTCTCCAACTTCTCTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAATAGTGTGATCTTGGCTCACTGCAACCTCCACCTCCCAGATTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGTTCATGTCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTAGTCAGGCTGGTCTCGAACTCCTGACCTTGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCGTGCATGACCAACTTCTCTTTTTGTTCAGAGTAAAAGCCAACGGCCCATGAGGCTTTCCATGGTCACGCCTCCGCTCATTCGCTCTGTGGCTTTGTCTTACACGGGTTCACTCCTCACTGGCCGCCTTGCTGACCCCATAGCTCACGGGCCTTACTCTGCTCTCGGGGCCTTTGCACTTGCTCCACTGCAAATGCTCCTCCCCCAGAGGCCTTTGTGGCCCATTCCCTCGGTTCCTTAGGAACAATCCCTTCCCTGGTCAAACCTCCACTGACATCTGTCTCCTTCCCTTCTGAATTTTTTTTCTCCGGTAGTATTTATCACTCTGCTATCCTTAGGATTTCCTTATCTTGTTTATCATCATCTCCTCATCCAGAGCTTAAGTCCTTTTTTTTTTTTTGAGATAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGTCTCGCTGAAAGCTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACTCGCCACCACACCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGAATTACAGGCGTGAGCCACCGCGCCTGGCCAACTTAAGTCCTTTTTAAAAATTTTTTTACTTTATATAAACTGTTTGTTTTCTTTATTTATTTCTTTTTTGAGACAAAATCTCTATCGCCCAGGCTGGAGTATAGTGGCACAGTCTCTGCTCACTGCAACCTTCACTTCCCAGGTTCAAGTGATTCTTCTGCCTTAGCCTCCCAAGTAGCTAGGATTACAGGCGCCCGCCACCACACAGGCTAATATTTGTGGGGTTTT	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13537:HG2_PB_pbsv_19422:HG3_PB_assemblyticsfalcon_16479:HG4_PB_pbsv_19359:HG2_10X_allpass_2915:HG4_PB_SVrefine2PBcRDovetail_9772:HG4_10X_allpass_3429:HG3_10X_allpass_3584:HG2_Ill_tnscope_2000:HG4_Ill_MetaSV_3169:HG3_Ill_MetaSV_3212:HG3_Ill_GATKHCSBGrefine_12408:HG3_PB_pbsv_19108:HG2_Ill_MetaSV_3054:HG4_PB_SVrefine2Falcon1Dovetail_12094:HG3_PB_SVrefine2PBcRDovetail_9559:HG3_PB_SVrefine2Falcon1Dovetail_12088:HG2_PB_SVrefine2PBcRplusDovetail_6958:HG3_Ill_SVrefine2DISCOVARDovetail_13573:HG2_PB_SVrefine2PB10Xhap12_14194:HG2_PB_SVrefine2Falcon2Bionano_9614:HG2_Ill_SVrefine2DISCOVARplusDovetail_7987;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13537:HG3_Ill_SVrefine2DISCOVARDovetail_13573:HG2_PB_SVrefine2PB10Xhap12_14194:HG2_PB_SVrefine2Falcon2Bionano_9614:HG2_Ill_SVrefine2DISCOVARplusDovetail_7987;NumExactMatchSVs=5;ClusterMaxShiftDist=0.218382;ClusterMaxSizeDiff=0.218382;ClusterMaxEditDist=0.218382;PBcalls=11;Illcalls=7;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=8;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-2704;DistBack=2748;DistForward=-2589;DistMin=-2589;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=245;REFWIDENED=22:18057645-18060593;PctSeqSimilarity=0.9032;PctSizeSimilarity=0.9989;PctRecOverlap=0.9597;SizeDiff=-3;StartDistance=-106;EndDistance=-109;GTMatch=0;TruScore=95;MatchId=2362.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:23:47:0|1:19:4:2:23:./.:30:0:10:1:0/0:45:2:0/1:190:72:2674:.:.
chr22	18099516	HG3_PB_SVrefine2Falcon1Dovetail_12089	GAAAGAGTCATACAAGAGGCCAGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGTGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2781:HG3_PB_HySA_28880:HG2_Ill_Krunchall_25419:HG3_PB_assemblyticsfalcon_16480:HG2_PB_pbsv_19423:HG3_PB_pbsv_19109:HG2_PB_HySA_34982:HG2_Ill_MetaSV_3055:HG2_PB_assemblyticsfalcon_16537:HG2_PB_assemblyticsPBcR_16036:HG4_PB_SVrefine2PBcRDovetail_9773:HG4_Ill_scalpel_17353:HG4_Ill_manta_4325:HG4_Ill_GATKHCSBGrefine_13006:HG4_10X_allpass_3430:HG3_PB_SVrefine2PBcRDovetail_9560:HG3_PB_SVrefine2Falcon1Dovetail_12089:HG3_Ill_scalpel_18130:HG3_Ill_manta_4148:HG3_Ill_SVrefine2DISCOVARDovetail_13574:HG3_Ill_MetaSV_3213:HG3_Ill_GATKHCSBGrefine_12409:HG3_10X_allpass_3585:HG2_PB_SVrefine2PBcRplusDovetail_6959:HG2_PB_SVrefine2PB10Xhap12_14195:HG2_PB_SVrefine2Falcon2Bionano_9615:HG2_PB_SVrefine2Falcon1plusDovetail_7496:HG2_Ill_manta_5115:HG2_Ill_SVrefine2DISCOVARplusDovetail_7988:HG2_Ill_GATKHCSBGrefine_12573:HG2_10X_allpass_2916:HG2_10X_SVrefine210Xhap12_13538:HG4_PB_pbsv_19361;NumClusterSVs=33;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13538:HG2_10X_allpass_2916:HG2_Ill_GATKHCSBGrefine_12573:HG2_Ill_SVrefine2DISCOVARplusDovetail_7988:HG2_Ill_manta_5115:HG2_PB_SVrefine2Falcon1plusDovetail_7496:HG2_PB_SVrefine2Falcon2Bionano_9615:HG2_PB_SVrefine2PB10Xhap12_14195:HG2_PB_SVrefine2PBcRplusDovetail_6959:HG3_10X_allpass_3585:HG3_Ill_GATKHCSBGrefine_12409:HG3_Ill_MetaSV_3213:HG3_Ill_SVrefine2DISCOVARDovetail_13574:HG3_Ill_manta_4148:HG3_Ill_scalpel_18130:HG3_PB_SVrefine2Falcon1Dovetail_12089:HG3_PB_SVrefine2PBcRDovetail_9560:HG4_10X_allpass_3430:HG4_Ill_GATKHCSBGrefine_13006:HG4_Ill_manta_4325:HG4_Ill_scalpel_17353:HG4_PB_SVrefine2PBcRDovetail_9773;NumExactMatchSVs=22;ClusterMaxShiftDist=0.126623;ClusterMaxSizeDiff=0.126623;ClusterMaxEditDist=0.126623;PBcalls=15;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=11;TenXexactcalls=4;CGexactcalls=0;HG2count=16;HG3count=11;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-310;DistBack=2398;DistForward=3456;DistMin=2398;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=22:18099517-18099842;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2363.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:45:1/1:4:20:2:15:1/1:0:22:0:23:1/1:0:23:0/1:2:17:.:.:.
chr22	18283896	HG2_Ill_manta_5116	ATCCTGAGTTTCCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCCGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13541:HG2_PB_PB10Xdip_19341:HG2_PB_assemblyticsfalcon_16541:HG2_PB_SVrefine2PB10Xhap12_14199:HG4_PB_pbsv_19364:HG2_Ill_breakscan11_2782:HG4_PB_SVrefine2PBcRDovetail_9774:HG4_Ill_MetaSV_3170:HG2_Ill_tnscope_2001:HG2_Ill_MetaSV_3056:HG4_Ill_GATKHCSBGrefine_13007:HG4_10X_allpass_3431:HG2_PB_pbsv_19426:HG2_Ill_scalpel_17766:HG2_Ill_manta_5116:HG2_Ill_GATKHCSBGrefine_12574:HG2_10X_allpass_2917:HG4_Ill_SVrefine2DISCOVARDovetail_13368:HG2_PB_SVrefine2PB10Xhap12_14198:HG2_PB_SVrefine2Falcon1plusDovetail_7498;NumClusterSVs=20;ExactMatchIDs=HG2_10X_allpass_2917:HG2_Ill_GATKHCSBGrefine_12574:HG2_Ill_manta_5116:HG2_Ill_scalpel_17766:HG2_PB_pbsv_19426:HG4_10X_allpass_3431:HG4_Ill_GATKHCSBGrefine_13007;NumExactMatchSVs=7;ClusterMaxShiftDist=0.198052;ClusterMaxSizeDiff=0.198052;ClusterMaxEditDist=0.198052;PBcalls=8;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=1;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=29342;DistForward=-252;DistMin=-252;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=27;REFWIDENED=22:18283897-18284245;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:23:0|1:39:1:0:20:1|0:0:24:41:0:0/1:25:26:0/1:21:7:.:.:.
chr22	18977575	HG2_Ill_scalpel_17775	CTGATCACATTTCAACATGAGATTTGGAGGGGCCAGACCTCAAAACTGCATCAGATACATTCATGT	C	20	PASS	ClusterIDs=HG4_Ill_Spiral_1456:HG3_PB_HySA_28906:HG2_PB_HySA_35006:HG4_PB_pbsv_19375:HG4_Ill_svaba_23491:HG4_Ill_scalpel_17365:HG4_Ill_manta_4328:HG4_Ill_Krunchall_25757:HG4_Ill_GATKHC_30204:HG4_Ill_GATKHCSBGrefine_13014:HG4_Ill_250bpfermikitraw_24751:HG4_Ill_150bpfermikitraw_23802:HG4_CG_vcfBeta_11890:HG4_10X_allpass_3435:HG3_PB_pbsv_19122:HG3_Ill_svaba_23823:HG3_Ill_scalpel_18136:HG3_Ill_manta_4150:HG3_Ill_Krunchall_24966:HG3_Ill_GATKHC_30187:HG3_Ill_GATKHCSBGrefine_12416:HG3_Ill_250bpfermikitraw_24409:HG3_Ill_150bpfermikitraw_23678:HG3_CG_vcfBeta_10240:HG3_10X_allpass_3586:HG2_PB_pbsv_19439:HG2_PB_assemblyticsfalcon_16552:HG2_Ill_svaba_23588:HG2_Ill_scalpel_17775:HG2_Ill_breakscan11_2783:HG2_Ill_SpiralSDKrefine_10393:HG2_Ill_Krunchall_25436:HG2_Ill_GATKHC_30275:HG2_Ill_GATKHCSBGrefine_12581:HG2_Ill_250bpfermikitraw_25146:HG2_CG_vcfBeta_10817:HG4_PB_assemblyticsfalcon_16249:HG4_PB_HySA_27839;NumClusterSVs=38;ExactMatchIDs=HG2_CG_vcfBeta_10817:HG2_Ill_250bpfermikitraw_25146:HG2_Ill_GATKHCSBGrefine_12581:HG2_Ill_GATKHC_30275:HG2_Ill_Krunchall_25436:HG2_Ill_SpiralSDKrefine_10393:HG2_Ill_breakscan11_2783:HG2_Ill_scalpel_17775:HG2_Ill_svaba_23588:HG2_PB_assemblyticsfalcon_16552:HG2_PB_pbsv_19439:HG3_10X_allpass_3586:HG3_CG_vcfBeta_10240:HG3_Ill_150bpfermikitraw_23678:HG3_Ill_250bpfermikitraw_24409:HG3_Ill_GATKHCSBGrefine_12416:HG3_Ill_GATKHC_30187:HG3_Ill_Krunchall_24966:HG3_Ill_manta_4150:HG3_Ill_scalpel_18136:HG3_Ill_svaba_23823:HG3_PB_pbsv_19122:HG4_10X_allpass_3435:HG4_CG_vcfBeta_11890:HG4_Ill_150bpfermikitraw_23802:HG4_Ill_250bpfermikitraw_24751:HG4_Ill_GATKHCSBGrefine_13014:HG4_Ill_GATKHC_30204:HG4_Ill_Krunchall_25757:HG4_Ill_manta_4328:HG4_Ill_scalpel_17365:HG4_Ill_svaba_23491:HG4_PB_pbsv_19375;NumExactMatchSVs=33;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.0300752;PBcalls=8;Illcalls=25;TenXcalls=2;CGcalls=3;PBexactcalls=4;Illexactcalls=24;TenXexactcalls=2;CGexactcalls=3;HG2count=12;HG3count=12;HG4count=14;NumTechs=4;NumTechsExact=4;SVLEN=-65;DistBack=1250;DistForward=-31;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=22:18977574-18977642;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2365.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:48:30:0|1:46:1:1:29:1|0:0:18:23:0:0/1:33:25:./.:.:.:.:.:.
chr22	19123752	HG3_Ill_GATKHCSBGrefine_12418	GTAGTCCCAGTTACTTGGGAGGTTGAGGCAGGAGAATCACTTGAACCCAAAAATCAAACTAAATATTCGCCACTATTTTC	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23644:HG2_PB_HySA_35008:HG4_PB_pbsv_19376:HG3_PB_pbsv_19123:HG2_PB_pbsv_19440:HG4_PB_HySA_27840:HG3_PB_HySA_28909:HG4_Ill_svaba_23492:HG4_Ill_scalpel_17366:HG4_Ill_manta_4329:HG4_Ill_SVrefine2DISCOVARDovetail_13371:HG4_Ill_GATKHCSBGrefine_13015:HG4_Ill_250bpfermikitraw_24752:HG4_10X_allpass_3436:HG3_Ill_svaba_23827:HG3_Ill_manta_4151:HG3_Ill_SVrefine2DISCOVARDovetail_13581:HG3_Ill_GATKHCSBGrefine_12418:HG3_Ill_250bpfermikitraw_24412:HG3_10X_allpass_3588:HG2_PB_SVrefine2PBcRplusDovetail_6967:HG2_PB_SVrefine2PB10Xhap12_14204:HG2_PB_SVrefine2Falcon1plusDovetail_7506:HG2_Ill_svaba_23592:HG2_Ill_scalpel_17776:HG2_Ill_manta_5119:HG2_Ill_SpiralSDKrefine_10395:HG2_Ill_SVrefine2DISCOVARplusDovetail_7994:HG2_Ill_GATKHCSBGrefine_12583:HG2_Ill_250bpfermikitraw_25149;NumClusterSVs=30;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23644:HG4_Ill_svaba_23492:HG4_Ill_scalpel_17366:HG4_Ill_manta_4329:HG4_Ill_SVrefine2DISCOVARDovetail_13371:HG4_Ill_GATKHCSBGrefine_13015:HG4_Ill_250bpfermikitraw_24752:HG4_10X_allpass_3436:HG3_Ill_svaba_23827:HG3_Ill_manta_4151:HG3_Ill_SVrefine2DISCOVARDovetail_13581:HG3_Ill_GATKHCSBGrefine_12418:HG3_Ill_250bpfermikitraw_24412:HG3_10X_allpass_3588:HG2_PB_SVrefine2PBcRplusDovetail_6967:HG2_PB_SVrefine2PB10Xhap12_14204:HG2_PB_SVrefine2Falcon1plusDovetail_7506:HG2_Ill_svaba_23592:HG2_Ill_scalpel_17776:HG2_Ill_manta_5119:HG2_Ill_SpiralSDKrefine_10395:HG2_Ill_SVrefine2DISCOVARplusDovetail_7994:HG2_Ill_GATKHCSBGrefine_12583:HG2_Ill_250bpfermikitraw_25149;NumExactMatchSVs=24;ClusterMaxShiftDist=0.145695;ClusterMaxSizeDiff=0.145695;ClusterMaxEditDist=0.162162;PBcalls=9;Illcalls=19;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=19;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-79;DistBack=27669;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=80;REFWIDENED=22:19123753-19123911;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2366.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:44:1/1:1:14:1:14:./.:0:1:0:7:1/1:0:25:./.:.:.:.:.:.
chr22	19155934	HG2_Ill_Krunchall_25441	TCCTGTGCACCTTGGTAAACACACACCTGTCCGTCCAGGTAAATGCCCCACTCACTCA	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_25150:HG4_PB_HySA_27841:HG2_PB_pbsv_19442:HG4_PB_pbsv_19377:HG4_Ill_svaba_23493:HG4_Ill_Krunchall_25758:HG4_Ill_250bpfermikitraw_24753:HG2_Ill_svaba_23593:HG2_Ill_SpiralSDKrefine_10396:HG2_Ill_Krunchall_25441:HG2_Ill_GATKHCSBGrefine_12584;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25150:HG4_Ill_svaba_23493:HG4_Ill_Krunchall_25758:HG4_Ill_250bpfermikitraw_24753:HG2_Ill_svaba_23593:HG2_Ill_SpiralSDKrefine_10396:HG2_Ill_Krunchall_25441:HG2_Ill_GATKHCSBGrefine_12584;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0175439;ClusterMaxSizeDiff=0.0173913;ClusterMaxEditDist=0.0350877;PBcalls=3;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-57;DistBack=11776;DistForward=7403;DistMin=7403;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=65;REFWIDENED=22:19155935-19156056;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2367.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:16:./.:8:13:11:2:./.:0:4:23:1:0/1:25:26:./.:.:.:.:9070:.
chr22	19538796	HG2_Ill_GATKHCSBGrefine_12585	CGGAATCACACAGCATGTGGGCTTTTGTGTCTGGCATCTTTCTCTCCGTAGATTTGCCTATTCTGGACATTTCATAAAACT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7998:HG4_Ill_scalpel_17368:HG2_PB_assemblyticsfalcon_16560:HG2_PB_pbsv_19445:HG4_PB_pbsv_19382:HG4_Ill_GATKHC_30208:HG4_Ill_250bpfermikitraw_24757:HG2_Ill_scalpel_17779:HG2_Ill_SpiralSDKrefine_10398:HG2_Ill_GATKHC_30282:HG2_Ill_GATKHCSBGrefine_12585:HG2_Ill_250bpfermikitraw_25154:HG2_Ill_breakscan11_2784:HG4_PB_assemblyticsfalcon_16254:HG2_PB_HySA_35014:HG4_Ill_SVrefine2DISCOVARDovetail_13374:HG2_PB_SVrefine2PBcRplusDovetail_6971:HG2_PB_SVrefine2PB10Xhap12_14208:HG2_PB_SVrefine2Falcon2Bionano_9624;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25154:HG2_Ill_GATKHCSBGrefine_12585:HG2_Ill_GATKHC_30282:HG2_Ill_SpiralSDKrefine_10398:HG2_Ill_scalpel_17779:HG4_Ill_250bpfermikitraw_24757:HG4_Ill_GATKHC_30208:HG4_Ill_scalpel_17368;NumExactMatchSVs=8;ClusterMaxShiftDist=0.222222;ClusterMaxSizeDiff=0.222222;ClusterMaxEditDist=0.342541;PBcalls=8;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-80;DistBack=-44;DistForward=18883;DistMin=-44;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=243;REFWIDENED=22:19538598-19538920;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2368.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:21:./.:19:17:1:3:1|0:0:17:37:0:0/1:21:16:./.:.:.:.:.:.
chr22	19558189	HG2_Ill_150bpfermikitraw_23648	GTGGGGTAATGTGGGGTAAGGCTGGGATAAGATAGAGAAAGGTTGGGGTAAAGTTGGAGTAAGGA	G	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23648:HG3_PB_assemblyticsfalcon_16496:HG4_PB_assemblyticsfalcon_16255:HG3_PB_pbsv_19126:HG2_PB_pbsv_19446:HG3_PB_HySA_28916:HG2_PB_HySA_35015:HG4_PB_pbsv_19383:HG4_Ill_250bpfermikitraw_24758:HG2_Ill_250bpfermikitraw_25155;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23648:HG4_PB_pbsv_19383:HG4_Ill_250bpfermikitraw_24758:HG2_Ill_250bpfermikitraw_25155;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0465116;ClusterMaxSizeDiff=0.0465116;ClusterMaxEditDist=0.0472441;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-64;DistBack=428;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=516;REFWIDENED=22:19557710-19558341;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2369.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:34:1/1:3:17:2:12:./.:5:22:4:24:1/1:0:9:./.:.:.:.:.:.
chr22	19947322	HG3_Ill_manta_4152	TCCCCCATGGCTCTTGGCCGTTGGGGCCCAGTTGGCCGCAGAGCCTTTGGCCTTGAGCACTTCCCCAG	T	20	PASS	ClusterIDs=HG2_Ill_150bpfermikitraw_23651:HG2_PB_assemblyticsfalcon_16566:HG2_PB_HySA_35021:HG3_PB_assemblyticsfalcon_16500:HG2_PB_assemblyticsPBcR_16062:HG4_PB_pbsv_19387:HG4_PB_assemblyticsfalcon_16258:HG3_PB_pbsv_19131:HG2_PB_pbsv_19450:HG4_PB_HySA_27853:HG3_PB_HySA_28921:HG4_Ill_svaba_23500:HG4_Ill_scalpel_17370:HG4_Ill_manta_4333:HG4_Ill_Krunchall_25763:HG4_Ill_GATKHC_30211:HG4_Ill_GATKHCSBGrefine_13021:HG4_Ill_Cortex_2205:HG4_Ill_250bpfermikitraw_24760:HG4_Ill_150bpfermikitraw_23807:HG4_10X_allpass_3437:HG3_Ill_svaba_23834:HG3_Ill_scalpel_18144:HG3_Ill_manta_4152:HG3_Ill_Krunchall_24976:HG3_Ill_GATKHC_30200:HG3_Ill_GATKHCSBGrefine_12421:HG3_Ill_Cortex_2240:HG3_Ill_250bpfermikitraw_24420:HG3_Ill_150bpfermikitraw_23688:HG2_Ill_svaba_23599:HG2_Ill_scalpel_17783:HG2_Ill_manta_5121:HG2_Ill_SpiralSDKrefine_10401:HG2_Ill_Krunchall_25447:HG2_Ill_GATKHC_30288:HG2_Ill_GATKHCSBGrefine_12587:HG2_Ill_Cortex_5229:HG2_Ill_250bpfermikitraw_25157;NumClusterSVs=39;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23651:HG4_Ill_svaba_23500:HG4_Ill_scalpel_17370:HG4_Ill_manta_4333:HG4_Ill_Krunchall_25763:HG4_Ill_GATKHC_30211:HG4_Ill_GATKHCSBGrefine_13021:HG4_Ill_Cortex_2205:HG4_Ill_250bpfermikitraw_24760:HG4_Ill_150bpfermikitraw_23807:HG4_10X_allpass_3437:HG3_Ill_svaba_23834:HG3_Ill_scalpel_18144:HG3_Ill_manta_4152:HG3_Ill_Krunchall_24976:HG3_Ill_GATKHC_30200:HG3_Ill_GATKHCSBGrefine_12421:HG3_Ill_Cortex_2240:HG3_Ill_250bpfermikitraw_24420:HG3_Ill_150bpfermikitraw_23688:HG2_Ill_svaba_23599:HG2_Ill_scalpel_17783:HG2_Ill_manta_5121:HG2_Ill_SpiralSDKrefine_10401:HG2_Ill_Krunchall_25447:HG2_Ill_GATKHC_30288:HG2_Ill_GATKHCSBGrefine_12587:HG2_Ill_Cortex_5229:HG2_Ill_250bpfermikitraw_25157;NumExactMatchSVs=29;ClusterMaxShiftDist=0.123077;ClusterMaxSizeDiff=0.123077;ClusterMaxEditDist=0.170543;PBcalls=10;Illcalls=28;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=28;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=12;HG4count=13;NumTechs=3;NumTechsExact=2;SVLEN=-67;DistBack=1721;DistForward=35047;DistMin=1721;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=82;REFWIDENED=22:19947285-19947433;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2370.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:44:1/1:0:12:0:16:1/1:0:15:0:13:1/1:0:42:./.:.:.:.:.:.
chr22	20950622	HG2_PB_assemblyticsfalcon_16595	CCAGAAATAATGTGTAACCAGATATGTGTGCATCCAGTGGCCCAGACAAGTTGACATATAGAATTAACCATCACAAGTCCACCCCTTGTCAACCTGGTACCTACACACATCTCCTTAAACCATACTTAACCTCCAAATAAACACAATAACAAAGTCAGTGTTAGCAGTGGAAGGTGTCTGAGTTAGTGGCAGCGAATCCGTATGGGTCTGCAGCAACCTCAATTCTTGCCTCCTCAGAAAAAAGAATTCAACTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGACCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCTCGTCTTTACTAAAAATACAAAAATTAGCCGGGCATGGTGGTGGGTGCCTGTTGTCCCAGCTACATGAGAGACTGAGGCAGGAGAATGGCAGGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAGAATTCAACTGAGGGGCATAAGGCAGAAAAAGAGACCGAGGCAAGTTTTGGAGGAGGAGTGAAAGTTTATTTAAAAAAGCTTTACAACAGGAAAGAAAGTATTCTTGGAAGAGACCTAAACAGGCACATAAAGGTCAAGTGCGGTGTTTAACCTTGATTCTAGGACTTTATAGACTGACCCCTTTCCCAAGATTCTTCCCCTAGGGTGGGCTGCCTACATGCACAGTGTCCTCCTTACCCTTGGGAGATGAGCACACGCAGTGTGTTTAGGAAACTGTACGCATGCCCATCTGAAGATTTCTTCCGTCCCAGAAGGTCATACTCTGCCATTGTCTCTTAATGCACATGGCCGGGGAAATTGCTTCTCCCTGGTGCCTGCATTCAATTAACACTTTAATGAAACAGGTGTGACCCATCAGGAACTGGCCTCTCCCTGATGCCAGCTGCCAATTTATCACTTTCATTTTTAATTTATTTTTTAGAAGGAGTCTCACTCTGTCACCCAGACTGGAGAGCAGTGGCATGATCTCGGCTCACTGTAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTGGCTGGGATTAGAGGCATGCACCAACATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGCTTTCACCATGTTGGCCAGGCTGGTCTCGAACCCCTGATGTCAAGTGACCCACCCACCTTGACCTCACAAAGTGCTAGGATTACAGGCATGAGACACCATGCCCAGCCCTGGCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGCTGTAGTGCAGTGGCATGATCTCGCCTCGCTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCAGAGCAGCTGGGACCACAGGCGCCCACCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGATTTCACTGTGTTAGCCAGGATGGTCTCGATCTGACCTCATGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCAGCCGCTAATTTTTTATTTTTTATTGTTTGTAGAGAGGGGGTCTCCCTATGTTGCCTAGGCTGTTTTGTTTTTTTTTTTAAACAGAGACAGGGTCTTGCTATGTTGCCCAGGCTGGTCTTGAACTCCTGGGCTCAAGCAGTCCTCCCATCTTGGTTTTCCAAAGTGCTAGGATTACAGGCATGAACCACCAGGCCCGGTCTCCACTGTGAATCTTTTTTTTTTTTTTTTGAGACTGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAGTGGCACCATCTCGGCTCACCGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTGCTGCCTCAGCCTCCTGAGTAGCTCAGATTACAGGCATGCACCACTACGCCCAGCTAATTTTTTGTATTTTTAATAGATACAGGTTTTCACCATGCTACCCAGGATAGTCTTGATCTCCTGACCTCATGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGATGTGAGCCACCGCACCCGGCCGCTAATGTTTTATTTTTTATTGTTTGTAGAGACAGGGTCTCCCCATGTTGCCTAGGCTGTTTTTTGTTTTGTTTTGTTTTGTTTAACAGAGACAGGATCTTGCTATGTTGCCAAGGCTGGTCTTGAACTCCTGGGTTCAAGCAGTCCTCCCATCTTGGTCTCCCACCCAAAATGCTAGGATAGGCGTGAACCGCCAGGCCCGGTCTCCATTGTGAATCTTTTTTTTTTCTTTTTTTTTTTTTGAGACTGTGTTTTGCTCTTGTTGCCCAGGCGGGAGTACAGTGGTGCGATCTCGGCTCACCGCAACCTCCGTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCTGAGTAGCTGGGATTACAGGCATGCGCCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCCCCATGTTGGTCAAGCTGATCACGAACTCCCGACCTCAGATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACCGCGCCCGGTTTACCATTTTGAATCTTAAGAGGACAAAGTCTGGTTCTCTAGAAGGCCCGAGTAGCTTTTCCCCTGAGCATCTTGAGAAAAAAGTGCTCTGAGCACTCCTTGGGAAGTCCGAGACAGCACATGCAGCCAGGTGCTCCCTGGCTGCTCTCCCAGAGGTCAGCACAGCTGGAGGCAGCTGGAGGGAGGAGGCTGCAGAGGCGCTGAAGCCAGGAAGACCCAACAGTGGAGAGAGAAGTTGCCTGGTGACTGACCCTCGGCTTGACCCTGTGCTCCCCTGGGCTGAGCTGGGTGTCAAAAGGCCTCCACCCTCCAAAGTGCCAGCCTCCTGCTGTGGCTGGAAAGCATTTGCTCCTCCTCCTCTTCTCACTTCTTTGCATTCTTCTGATCTCTTAAGGGCGTACAAAGATTCACATGGATATTAAAGTCAATGGTGATTTTCATAGCTGGAATACTCGTTGGGAGAAAGTAGGAATTCTTTTTTTTTTTTTTTTCTCCCAAGCTCAAGCGATCCTCCCACCTCAGCCTTCTGAGTAGCTGGGACCACAGGTGTGAGCCTCCATGATGGCCTGG	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_2002:HG3_PB_pbsv_19141:HG3_10X_allpass_3589:HG3_Ill_Krunchall_24999:HG2_Ill_Krunchall_25466:HG2_10X_allpass_2918:HG2_Ill_MetaSV_3061:HG2_PB_pbsv_19460:HG2_PB_assemblyticsfalcon_16595:HG2_PB_assemblyticsPBcR_16077:HG2_PB_SVrefine2PBcRplusDovetail_6980:HG2_PB_SVrefine2PB10Xhap12_14218:HG2_PB_SVrefine2Falcon1plusDovetail_7525:HG2_10X_SVrefine210Xhap12_13547:HG3_Ill_Krunchall_24998:HG3_Ill_MetaSV_3218;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13547:HG2_PB_SVrefine2Falcon1plusDovetail_7525:HG2_PB_SVrefine2PB10Xhap12_14218:HG2_PB_SVrefine2PBcRplusDovetail_6980:HG2_PB_assemblyticsPBcR_16077:HG2_PB_assemblyticsfalcon_16595:HG2_PB_pbsv_19460;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0741634;ClusterMaxSizeDiff=0.0741634;ClusterMaxEditDist=0.0741634;PBcalls=7;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-3217;DistBack=8402;DistForward=-3217;DistMin=-3217;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=22:20950623-20953840;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2371.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:39:0|1:26:4:2:16:0|1:54:0:1:26:0/1:50:21:0/1:282:137:3267:.:.
chr22	22069948	HG3_10X_allpass_3590	GCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACTGGCACGTGCCACCACACCTAATTTTTCTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTGAGACAGAGTTTCGCTCTTATTGCCCAGGCTGGAGTGCAATGGCACGATCTTGGCTCACCA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6982:HG2_Ill_Krunchall_25480:HG3_PB_HySA_28950:HG2_PB_pbsv_19463:HG3_PB_pbsv_19143:HG2_PB_HySA_35070:HG2_Ill_Spiral_1226:HG3_Ill_MetaSV_3220:HG3_Ill_scalpel_18161:HG3_Ill_manta_4155:HG3_Ill_GATKHC_30247:HG3_Ill_GATKHCSBGrefine_12435:HG3_10X_allpass_3590:HG2_Ill_scalpel_17805:HG2_Ill_manta_5125:HG2_Ill_MetaSV_3064:HG2_Ill_GATKHC_30336:HG2_Ill_GATKHCSBGrefine_12598:HG2_10X_allpass_2920:HG3_PB_SVrefine2PBcRDovetail_9568:HG3_Ill_SVrefine2DISCOVARDovetail_13591:HG2_PB_SVrefine2Falcon2Bionano_9632:HG2_Ill_SVrefine2DISCOVARplusDovetail_8009:HG2_10X_SVrefine210Xhap12_13552;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_2920:HG2_Ill_GATKHCSBGrefine_12598:HG2_Ill_GATKHC_30336:HG2_Ill_MetaSV_3064:HG2_Ill_manta_5125:HG2_Ill_scalpel_17805:HG3_10X_allpass_3590:HG3_Ill_GATKHCSBGrefine_12435:HG3_Ill_GATKHC_30247:HG3_Ill_manta_4155:HG3_Ill_scalpel_18161;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0813008;ClusterMaxSizeDiff=0.0813008;ClusterMaxEditDist=0.146341;PBcalls=7;Illcalls=14;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=10;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-182;DistBack=5917;DistForward=-174;DistMin=-174;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=120;REFWIDENED=22:22069910-22070211;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2372.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:29:0|1:25:0:0:27:0|1:29:1:0:10:0/1:15:16:./.:.:.:.:.:.
chr22	22928287	HG2_Ill_GATKHCSBGrefine_12600	CCTTTCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCCTTTCTTTCCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	C	20	PASS	ClusterIDs=HG3_PB_pbsv_19148:HG4_PB_SVrefine2PBcRDovetail_9787:HG4_Ill_SVrefine2DISCOVARDovetail_13393:HG3_PB_assemblyticsfalcon_16530:HG4_PB_assemblyticsfalcon_16287:HG2_PB_assemblyticsfalcon_16612:HG2_PB_assemblyticsPBcR_16089:HG2_PB_SVrefine2PB10Xhap12_14229:HG2_PB_SVrefine2PBcRplusDovetail_6989:HG2_PB_SVrefine2Falcon1plusDovetail_7537:HG4_PB_SVrefine2Falcon1Dovetail_12109:HG3_PB_SVrefine2PBcRDovetail_9573:HG3_PB_SVrefine2Falcon1Dovetail_12110:HG2_PB_SVrefine2PB10Xhap12_14228:HG3_Ill_SVrefine2DISCOVARDovetail_13594:HG2_10X_SVrefine210Xhap12_13557:HG3_Ill_GATKHC_30260:HG3_Ill_GATKHCSBGrefine_12438:HG2_Ill_GATKHC_30346:HG2_Ill_GATKHCSBGrefine_12600:HG4_Ill_GATKHC_30275:HG4_Ill_GATKHCSBGrefine_13039:HG4_Ill_250bpfermikitraw_24808:HG4_Ill_150bpfermikitraw_23840:HG2_Ill_Krunchall_25490:HG3_Ill_Krunchall_25024:HG4_Ill_Krunchall_25805:HG4_PB_pbsv_19402:HG2_PB_pbsv_19468;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12600:HG2_Ill_GATKHC_30346:HG3_Ill_GATKHCSBGrefine_12438:HG3_Ill_GATKHC_30260;NumExactMatchSVs=4;ClusterMaxShiftDist=0.273504;ClusterMaxSizeDiff=0.273504;ClusterMaxEditDist=0.273504;PBcalls=15;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=10;NumTechs=3;NumTechsExact=1;SVLEN=-132;DistBack=12;DistForward=10553;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=22:22928288-22928419;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2374.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:29:0|1:20:0:0:29:0|1:51:1:1:23:0/1:41:25:./.:.:.:.:.:.
chr22	23472246	HG2_Ill_GATKHC_30350	AAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_19151:HG2_PB_assemblyticsfalcon_16618:HG3_Ill_svaba_23873:HG3_Ill_Krunchall_25031:HG3_Ill_GATKHC_30264:HG3_Ill_GATKHCSBGrefine_12440:HG3_Ill_250bpfermikitraw_24479:HG3_Ill_150bpfermikitraw_23739:HG2_Ill_svaba_23633:HG2_Ill_manta_5129:HG2_Ill_GATKHC_30350:HG2_Ill_GATKHCSBGrefine_12603:HG2_Ill_250bpfermikitraw_25214:HG2_Ill_150bpfermikitraw_23693:HG2_PB_pbsv_19473;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23693:HG2_Ill_250bpfermikitraw_25214:HG2_Ill_GATKHCSBGrefine_12603:HG2_Ill_GATKHC_30350:HG2_Ill_manta_5129:HG2_Ill_svaba_23633:HG3_Ill_150bpfermikitraw_23739:HG3_Ill_250bpfermikitraw_24479:HG3_Ill_GATKHCSBGrefine_12440:HG3_Ill_GATKHC_30264:HG3_Ill_Krunchall_25031:HG3_Ill_svaba_23873;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0487805;ClusterMaxSizeDiff=0.0487805;ClusterMaxEditDist=0.162602;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-60;DistBack=57070;DistForward=8;DistMin=8;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=24;REFWIDENED=22:23472245-23472331;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2375.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:25:0|1:22:2:3:23:./.:5:0:0:13:0/1:21:19:./.:.:.:.:.:.
chr22	23478348	HG2_PB_SVrefine2Falcon1plusDovetail_7540	GTGTTTGCCTGTGTGCCTCCTCACCAGAGGCAAGCAAGAGGGCAGGGAACAGGCTGCCAGGAAGCTCTCTTGTCCGTGGGATGTCATGCAAATTAACTCCTCAAGGTGACAAGATGCCAAGCCCAGGGCTGCTATCCTCATTCCCCCTTCCTGTCACTACTTCTGTGGGTAGAAGAGGCAGAAGAGTTTCAACCTGGGCAGTTCAGGGCAGCTACTTAGAGCTTGATGGGCTCTGAAAGCTATTGACATTGGTTATAAGATCACCACTGACCTCAAGGGAAATTTAGAAGTTGGCCACATTTCTGAGAACGCTGAAGGAGTGCACGGGCCAGGCCATTATCAGGTCCCTGGTCAGGGATGGTCACTTCACCATGTCTTCCTGCCTTGCTAATGTGGGCACAGCCAGGACCCCTGGCTTAGGCACTCTAGGTGCTGCTAAACAAATCCTTACTACCATTCATTATAAGTAGGTTGATGCAAAAGTAATTGCGGTTTTTACCACTACTTTTAATTGCAAAACTGCAATTACTTTTGCACTAACCTGATAATTGCTCAGGCTTCAGGGACCTGTCCTCTCAGCATCTGTCCCCCCTAACTGGGGATTACTACCTAATGTCCACATCAGGTCCAGAAAAGTAGGGAGGAAAAACCAGCAAGAAAGGTGACTTGACTCCTGTGTGCCCCTAACCTTTTAAAGCACCTTGCCTGGGTCATCTAAGATCTGCAGAGTGAGGCTGGGATTAGGATTGTTGCCCAGATCACAGAGCAGGAAAGAGTGGGCCCCCCAAAAGGCTGGGGCTTGTGTCCCTACTTCACTGGTCTGTCTGCAGTGCCAGCCTGCCCTTCTTGGTACAAAGCATGTGAATTAGGGTGCTAGCCATGGCACCACCTCCACACACACATGCACGGTTCACACAGGGCCGGGGCTGCACACAGGATCAGCCACCAAGGCAGCGAGAGCTTGGGGACTAGCAGGGCTGAGTGACTTTGGGTTTTATGAGATGCCCTGCAGCCTCTGCCTCTCTGGGTTCAAGCAATTCTTGTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCATGTGTCATCATGCTCAGCTAATTTTTGTATTTTTAGTAGAGACTGGTTTCACCA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7540:HG3_PB_pbsv_19152:HG2_PB_pbsv_19474:HG3_10X_allpass_3593:HG3_Ill_MetaSV_3224:HG3_PB_SVrefine2PBcRDovetail_9575:HG3_PB_SVrefine2Falcon1Dovetail_12111:HG2_PB_SVrefine2PB10Xhap12_14231;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7540:HG3_PB_SVrefine2PBcRDovetail_9575:HG3_PB_SVrefine2Falcon1Dovetail_12111:HG2_PB_SVrefine2PB10Xhap12_14231;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00176678;ClusterMaxSizeDiff=0.00176678;ClusterMaxEditDist=0.00265135;PBcalls=6;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-1131;DistBack=5664;DistForward=-1051;DistMin=-1051;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=233;REFWIDENED=22:23478349-23479712;PctSeqSimilarity=0.9877;PctSizeSimilarity=1;PctRecOverlap=0.9293;SizeDiff=0;StartDistance=-80;EndDistance=-80;GTMatch=0;TruScore=97;MatchId=2376.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:33:0|1:24:0:1:24:./.:52:0:7:8:0/1:48:9:0/1:77:33:.:.:.
chr22	24025617	HG2_10X_SVrefine210Xhap12_13567	TGTGTGGCGTACCTGGAGAGACTCTCTGGTCCTGTGCCCTCTTCTGGCTCACTGGATTCTTAGGATTATTGAGAGACTGGGCTTAAAGCTCTCAGCCTAGGGCCCACAATGCCACAGGGAATCAAATCAGCATGACCAGGGATCGAAGACCTCTCCTTGGCTGGGAATGGGGAATCAGGGTTGCAGAGACAAGGGGCACAGAGAGATGCCTGTGCCATCAGAGAAGGGACTGGGGATCTGGTCCACTCTGGGCTCCTCAACCTGAGCGTGAGGCCTTGCTGTGCCATGAGCTCACCTGCCCCTTGGGAGTCCACTGTGACTGCAGTCCAGTGGGGTCAATGTCCACACTGATGCCGGAAAGAAGTCCTGGGAGATGCGGAGGGCATCCTGTAGCGGCAGGCAGTCTGGGTGGTCCACGGGTGTGAGCTTCAGCAGGTCCTGGGAAGGGATGAGGTGGTGAATTGGGGGCCGTGTTTTTGGGGTTCGATGAGAAGCTCCTGGGGGAATGCTCAGTCCTCACCAAAAGAATTCAAAGGGCAGGTACTCAGGGACCCACACTCGTGCCTGCAAAATCTGAACTGAAAATTAGAATCGGAGCAGCAGGGTTGATTCTAAAAGGGGCTGGGCTCGCTTTTCTCCCTGCTGCAGTCATTACTCGTTTCCCCTGGCAGAGGCAGCCGGGTGGAGGCTCATCTCTTCAAGCAGCTGGGAGAGACACCCCACTACCCACCCTGCAGCTGCTCCAAGGATACTGGAGACAAAAAGACAGGGGCTGGGGAAGCAAGATGTTCCTGCCTCGACCAAGACAGCAATTGGCCAAATGCCCTGACCCTGCTGGCATGGTTACCGCAGGCCAGGCAGGCATATTCAGGGCTCAGGATCCCTCTGCCTGACTTTTCAAATGGGCTGTTCTCAGTGACTCTGGCCCCCTCCCACCCTGGGCTCACTCTTGAGAAACTCCTAAGCCTTCTCTGGCCCTTCAGGGGCCTTAACGCTTATGTGTAGGACCAGGATGCTCTGAGTGACCTACTTGGTCAATGGGCTGCTACAGCAGAGCTGTTGGGGAAGGCAGAGAGAAAAAGGACAATGACAGACAAAGAACCACTCAACACCTCAGAGACCAGCTTTGTCCCCCACCCAACCGCCTTGCTCCCCACATGAACACCTGCTTGCAGGAAGCCAAAGTGGGTCCACAGCAGCCCACCTCTGTTCTCACTCCCAGGGCAGACAAAGCAGCAAGAACAGGTGACACACAGCCCCGGTGACCCTGTCCCCTCCCTACCCGTGCCTACTCTCCCATCAAACCTGGCTTCGAGGGCTGCCCGCCAGTCCTGTCCAGGCCTTATCTGGCTCAGAGCAGATGATCCCCTGCACCTCCCACCCTGAATCACACAGCTACACCCAGCACATGCTACAGAGGCCCAGCACACTCTGGATCACATCCAGAAACTCCACAATAGGGGAGGAGACATGCTGTTTCCCAGGAAGGGCAGCTCCCCAGACTTGGTCATTCTCAGACTCCTCCAGTCAAAGGCCGGGCACAGCCAGCTGGGATCGCCATGCTTCACTCTGACCCACACGACTGGCCTTGCCTCCTCTATGGGAAGAGACCCCTCAGCACAACCTCAAACCGAGACATAACAGGACAGGACAGGCTGGATGCTAGAGAGGCCAGCCAGATCTCCACACAAAGGCTCTGCTCTTAAGCAGGAGGTAGCCTGAGGGTCAAAGGTTTCCTGAAGCAACTCAGGTGAGACCTCACATACAAGAGCCCCAAAGAGGCTGCAAAAGCACCAGCTCAGCCAGCCAAGAACCCAGGTGTCACACCCTTCTCAGACCACTGAGGATCGCTGGGATTCAGCAGGAAAAGGTGGACATGACAGCTGATGGACCAATACTTCCCAACACCCTTCCAGCAAGCA	T	20	PASS	ClusterIDs=HG3_PB_pbsv_19159:HG2_PB_pbsv_19482:HG3_PB_assemblyticsfalcon_16552:HG2_PB_assemblyticsfalcon_16630:HG4_PB_assemblyticsfalcon_16303:HG2_PB_assemblyticsPBcR_16106:HG4_PB_pbsv_19413:HG4_Ill_MetaSV_3182:HG2_Ill_tnscope_2003:HG4_PB_SVrefine2Falcon1Dovetail_12118:HG4_Ill_SVrefine2DISCOVARDovetail_13398:HG4_10X_allpass_3441:HG3_PB_SVrefine2PBcRDovetail_9580:HG3_PB_SVrefine2Falcon1Dovetail_12118:HG3_Ill_SVrefine2DISCOVARDovetail_13599:HG3_Ill_MetaSV_3229:HG3_10X_allpass_3597:HG2_PB_SVrefine2PBcRplusDovetail_6995:HG2_PB_SVrefine2PB10Xhap12_14235:HG2_PB_SVrefine2Falcon2Bionano_9644:HG2_PB_SVrefine2Falcon1plusDovetail_7546:HG2_Ill_breakscan11_2791:HG2_Ill_MetaSV_3069:HG2_10X_allpass_2922:HG2_10X_SVrefine210Xhap12_13567:HG4_Ill_Krunchall_25822:HG3_Ill_Krunchall_25040:HG2_Ill_Krunchall_25504;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13567:HG2_10X_allpass_2922:HG2_Ill_MetaSV_3069:HG2_Ill_breakscan11_2791:HG2_PB_SVrefine2Falcon1plusDovetail_7546:HG2_PB_SVrefine2Falcon2Bionano_9644:HG2_PB_SVrefine2PB10Xhap12_14235:HG2_PB_SVrefine2PBcRplusDovetail_6995:HG3_10X_allpass_3597:HG3_Ill_MetaSV_3229:HG3_Ill_SVrefine2DISCOVARDovetail_13599:HG3_PB_SVrefine2Falcon1Dovetail_12118:HG3_PB_SVrefine2PBcRDovetail_9580:HG4_10X_allpass_3441:HG4_Ill_SVrefine2DISCOVARDovetail_13398:HG4_PB_SVrefine2Falcon1Dovetail_12118;NumExactMatchSVs=16;ClusterMaxShiftDist=0.0816224;ClusterMaxSizeDiff=0.0816224;ClusterMaxEditDist=0.0816224;PBcalls=14;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=5;TenXexactcalls=4;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-1921;DistBack=7139;DistForward=-1921;DistMin=-1921;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=22:24025618-24027539;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2377.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:46:51:./.:21:30:22:5:0|1:41:0:0:17:0/1:71:24:0/1:144:52:.:.:.
chr22	24054882	HG3_Ill_GATKHC_30275	ACCGTGTATTTTGGACTTCACGATCTTTTTTTAGATGGGGTCTCGCTCTGTCACCCAGGCTGTCTCAGCCTC	A	20	PASS	ClusterIDs=HG2_Ill_Spiral_1228:HG3_PB_pbsv_19160:HG2_PB_assemblyticsfalcon_16631:HG2_PB_assemblyticsPBcR_16107:HG4_PB_HySA_27925:HG2_PB_PB10Xdip_19428:HG2_PB_HySA_35091:HG4_PB_pbsv_19414:HG4_Ill_svaba_23552:HG4_Ill_manta_4338:HG4_Ill_Krunchall_25823:HG4_Ill_GATKHC_30295:HG4_Ill_GATKHCSBGrefine_13049:HG4_Ill_250bpfermikitraw_24833:HG4_Ill_150bpfermikitraw_23858:HG4_CG_vcfBeta_11912:HG4_10X_allpass_3442:HG3_PB_assemblyticsfalcon_16553:HG3_Ill_svaba_23887:HG3_Ill_Krunchall_25041:HG3_Ill_GATKHC_30275:HG3_Ill_GATKHCSBGrefine_12445:HG3_Ill_250bpfermikitraw_24488:HG3_Ill_150bpfermikitraw_23747:HG3_CG_vcfBeta_10269:HG3_10X_allpass_3598:HG2_PB_pbsv_19483:HG2_PB_SVrefine2PBcRplusDovetail_6996:HG2_PB_SVrefine2PB10Xhap12_14236:HG2_PB_SVrefine2Falcon1plusDovetail_7547:HG2_Ill_svaba_23648:HG2_Ill_scalpel_17818:HG2_Ill_manta_5132:HG2_Ill_breakscan11_2792:HG2_Ill_SpiralSDKrefine_10443:HG2_Ill_SVrefine2DISCOVARplusDovetail_8022:HG2_Ill_Krunchall_25505:HG2_Ill_GATKHC_30363:HG2_Ill_GATKHCSBGrefine_12606:HG2_Ill_250bpfermikitraw_25227:HG2_Ill_150bpfermikitraw_23701:HG2_CG_vcfBeta_10843:HG2_10X_SVrefine210Xhap12_13568;NumClusterSVs=43;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13568:HG2_CG_vcfBeta_10843:HG2_Ill_150bpfermikitraw_23701:HG2_Ill_250bpfermikitraw_25227:HG2_Ill_GATKHCSBGrefine_12606:HG2_Ill_GATKHC_30363:HG2_Ill_Krunchall_25505:HG2_Ill_SVrefine2DISCOVARplusDovetail_8022:HG2_Ill_SpiralSDKrefine_10443:HG2_Ill_breakscan11_2792:HG2_Ill_manta_5132:HG2_Ill_scalpel_17818:HG2_Ill_svaba_23648:HG2_PB_SVrefine2Falcon1plusDovetail_7547:HG2_PB_SVrefine2PB10Xhap12_14236:HG2_PB_SVrefine2PBcRplusDovetail_6996:HG2_PB_pbsv_19483:HG3_10X_allpass_3598:HG3_CG_vcfBeta_10269:HG3_Ill_150bpfermikitraw_23747:HG3_Ill_250bpfermikitraw_24488:HG3_Ill_GATKHCSBGrefine_12445:HG3_Ill_GATKHC_30275:HG3_Ill_Krunchall_25041:HG3_Ill_svaba_23887:HG3_PB_assemblyticsfalcon_16553:HG4_10X_allpass_3442:HG4_CG_vcfBeta_11912:HG4_Ill_150bpfermikitraw_23858:HG4_Ill_250bpfermikitraw_24833:HG4_Ill_GATKHCSBGrefine_13049:HG4_Ill_GATKHC_30295:HG4_Ill_Krunchall_25823:HG4_Ill_manta_4338:HG4_Ill_svaba_23552:HG4_PB_pbsv_19414;NumExactMatchSVs=36;ClusterMaxShiftDist=0.18705;ClusterMaxSizeDiff=0.18705;ClusterMaxEditDist=0.18705;PBcalls=12;Illcalls=25;TenXcalls=3;CGcalls=3;PBexactcalls=6;Illexactcalls=24;TenXexactcalls=3;CGexactcalls=3;HG2count=22;HG3count=10;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-71;DistBack=27343;DistForward=14692;DistMin=14692;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=22:24054883-24054960;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2378.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:27:1|0:2:23:18:1:1|0:0:23:27:0:0/1:37:26:./.:.:.:.:.:.
chr22	25744965	HG2_PB_SVrefine2PBcRplusDovetail_7004	CGGCCTAGCCCAGCCCCAGGTGAGACCTGGCCTAGCCCAGCCCCAGGTGAGACCT	C	20	PASS	ClusterIDs=HG2_PB_pbsv_19495:HG3_PB_HySA_28976:HG3_PB_pbsv_19171:HG2_PB_HySA_35113:HG4_PB_SVrefine2Falcon1Dovetail_12124:HG3_PB_SVrefine2PBcRDovetail_9589:HG3_Ill_SVrefine2DISCOVARDovetail_13606:HG3_Ill_GATKHCSBGrefine_12450:HG3_Ill_250bpfermikitraw_24500:HG3_Ill_150bpfermikitraw_23759:HG2_PB_SVrefine2PBcRplusDovetail_7004:HG2_PB_SVrefine2PB10Xhap12_14247:HG2_PB_SVrefine2Falcon1plusDovetail_7555:HG2_Ill_SpiralSDKrefine_10458:HG2_Ill_SVrefine2DISCOVARplusDovetail_8034:HG2_Ill_GATKHCSBGrefine_12613:HG2_Ill_250bpfermikitraw_25239;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25239:HG2_Ill_GATKHCSBGrefine_12613:HG2_Ill_SVrefine2DISCOVARplusDovetail_8034:HG2_Ill_SpiralSDKrefine_10458:HG2_PB_SVrefine2Falcon1plusDovetail_7555:HG2_PB_SVrefine2PB10Xhap12_14247:HG2_PB_SVrefine2PBcRplusDovetail_7004:HG3_Ill_150bpfermikitraw_23759:HG3_Ill_250bpfermikitraw_24500:HG3_Ill_GATKHCSBGrefine_12450:HG3_Ill_SVrefine2DISCOVARDovetail_13606:HG3_PB_SVrefine2PBcRDovetail_9589:HG4_PB_SVrefine2Falcon1Dovetail_12124;NumExactMatchSVs=13;ClusterMaxShiftDist=0.0540541;ClusterMaxSizeDiff=0.0540541;ClusterMaxEditDist=0.0540541;PBcalls=9;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=-28;DistForward=4228;DistMin=-28;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=109;REFWIDENED=22:25744966-25745128;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2379.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:10:40:1/1:3:13:1:10:./.:1:1:0:1:0/1:12:16:./.:.:.:.:.:.
chr22	26891514	HG4_Ill_svaba_23574	ATGTGTATATATATACACATATATATATGTGTGTGTGTGTATACATATATACATATATATGTGTGTATATACATATATGTGTATATACATGTGTATATATACATGTATATGCATGTGTGTATATATATACATATATG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_19174:HG2_Ill_Krunchall_25540:HG4_PB_HySA_27956:HG3_Ill_Krunchall_25071:HG2_Ill_Krunchall_25539:HG3_PB_SVrefine2PBcRDovetail_9591:HG3_PB_assemblyticsfalcon_16582:HG2_PB_assemblyticsPBcR_16140:HG2_PB_assemblyticsfalcon_16662:HG4_PB_assemblyticsfalcon_16328:HG4_PB_SVrefine2PBcRDovetail_9801:HG4_PB_SVrefine2Falcon1Dovetail_12126:HG4_Ill_svaba_23574:HG4_Ill_MetaSV_3188:HG4_Ill_GATKHC_30324:HG4_Ill_GATKHCSBGrefine_13055:HG4_10X_allpass_3445:HG3_Ill_svaba_23913:HG3_Ill_MetaSV_3235:HG3_Ill_GATKHC_30314:HG3_Ill_GATKHCSBGrefine_12452:HG3_10X_allpass_3602:HG2_Ill_svaba_23678:HG2_Ill_scalpel_17844:HG2_Ill_MetaSV_3076:HG2_Ill_GATKHC_30403:HG2_Ill_GATKHCSBGrefine_12615:HG2_10X_allpass_2926:HG2_PB_pbsv_19499:HG4_PB_pbsv_19426:HG3_PB_SVrefine2Falcon1Dovetail_12122:HG2_PB_SVrefine2PBcRplusDovetail_7006:HG2_PB_SVrefine2PB10Xhap12_14251:HG2_PB_SVrefine2Falcon1plusDovetail_7558:HG2_10X_SVrefine210Xhap12_13582;NumClusterSVs=35;ExactMatchIDs=HG2_10X_allpass_2926:HG2_Ill_GATKHCSBGrefine_12615:HG2_Ill_GATKHC_30403:HG2_Ill_MetaSV_3076:HG2_Ill_scalpel_17844:HG2_Ill_svaba_23678:HG3_10X_allpass_3602:HG3_Ill_GATKHCSBGrefine_12452:HG3_Ill_GATKHC_30314:HG3_Ill_MetaSV_3235:HG3_Ill_svaba_23913:HG4_10X_allpass_3445:HG4_Ill_GATKHCSBGrefine_13055:HG4_Ill_GATKHC_30324:HG4_Ill_MetaSV_3188:HG4_Ill_svaba_23574:HG4_PB_SVrefine2Falcon1Dovetail_12126:HG4_PB_SVrefine2PBcRDovetail_9801:HG4_PB_assemblyticsfalcon_16328;NumExactMatchSVs=19;ClusterMaxShiftDist=0.1673;ClusterMaxSizeDiff=0.1673;ClusterMaxEditDist=0.167939;PBcalls=15;Illcalls=16;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=13;TenXexactcalls=3;CGexactcalls=0;HG2count=15;HG3count=10;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-136;DistBack=-130;DistForward=-133;DistMin=-133;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=22:26891510-26891653;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2381.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:29:1|0:6:24:15:0:0|1:27:0:0:19:0/1:30:22:./.:.:.:.:.:.
chr22	27168066	HG4_PB_SVrefine2PBcRDovetail_9803	CCTTAACCTCTTTTTTTTATTTTATTTTATTTTATTTTATTTTATTTATTTATTTATTTTTTTTTATTGATAATTCTTGGGTGTTTCTCACAGAGGGGGATTTGGCAGGGTCATGGGACAATAGTGGAGGGAAGGTCAGCAGATAAACAAGTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGACCCTGCGGCCTTCCGCAGTGTTTGTGTCCCTGATTACTTGAGATTAGGGATTGGTGATGACTCTTAACGAGCATGCTGCCTTCAAGCATCTGTTTAACAAAGCACATCTTGCACCGCCCTTAATCCATTTAACCCTGAGTGGACACAGCACATGTTTCAGAGAGCACAGGGTTGGGGGTAAGGTCACAGATCAATAGGATCCCAAGGCAGAAGAATCTTTCTTAGTGCAGAACAAAATGAAAAGTCTCCCATGTCTACTTCTTTCTACACAGACACGGCAACCATCCGATTTCTCAATCTTTTCCCCACCTTTCCCGCCTTTCTATTCCACAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGCTGGGCACACCTCCCAGACGGGGTGGTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCCACCTCCTTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCAGACGGGGCAGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCCATCTCCCTCCCAGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGGCGGGCAGAGGCGCCCCTCACCTCCTGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGCATGGCTGGCCAGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGATGGCACGGCTGGCCGGGCGGGGGGGCTGACCCCCCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCTGGGCGGAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCGGCTGCCGGGCGGAGGGGCTCCTCACTTCTCAGACGGGGTGGTTGCCAGGCAGAGGGTCTCCTCACTTCTCAGACGGGGCGGCCGGGCAGAGACACTCCTCACCTCCCAGACGGGGTCTCGGCCGGGCAGAGGCGCTCCTCACATCCCAGATGGGGCGGCGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGTGATGGCGGG	C	20	PASS	ClusterIDs=HG2_Ill_tnscope_2006:HG2_PB_HySA_35137:HG2_PB_assemblyticsfalcon_16667:HG3_10X_allpass_3603:HG4_Ill_Krunchall_25857:HG3_Ill_Krunchall_25077:HG2_Ill_Krunchall_25548:HG2_PB_assemblyticsPBcR_16144:HG2_Ill_MetaSV_3077:HG4_PB_pbsv_19428:HG4_PB_assemblyticsfalcon_16335:HG4_PB_SVrefine2PBcRDovetail_9803:HG4_PB_SVrefine2Falcon1Dovetail_12128:HG4_Ill_SVrefine2DISCOVARDovetail_13412:HG4_Ill_MetaSV_3190:HG4_Ill_GATKHCSBGrefine_13056:HG4_10X_allpass_3446:HG3_PB_pbsv_19176:HG3_PB_assemblyticsfalcon_16588:HG3_PB_SVrefine2PBcRDovetail_9593:HG3_PB_SVrefine2Falcon1Dovetail_12123:HG3_Ill_SVrefine2DISCOVARDovetail_13614:HG3_Ill_MetaSV_3236:HG3_Ill_GATKHCSBGrefine_12453:HG2_PB_pbsv_19500:HG2_PB_SVrefine2PBcRplusDovetail_7007:HG2_PB_SVrefine2PB10Xhap12_14252:HG2_PB_SVrefine2Falcon2Bionano_9653:HG2_PB_SVrefine2Falcon1plusDovetail_7559:HG2_Ill_breakscan11_2794:HG2_Ill_SVrefine2DISCOVARplusDovetail_8041:HG2_Ill_GATKHCSBGrefine_12616:HG2_10X_allpass_2927:HG2_10X_SVrefine210Xhap12_13584;NumClusterSVs=34;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13584:HG2_10X_allpass_2927:HG2_Ill_GATKHCSBGrefine_12616:HG2_Ill_SVrefine2DISCOVARplusDovetail_8041:HG2_Ill_breakscan11_2794:HG2_PB_SVrefine2Falcon1plusDovetail_7559:HG2_PB_SVrefine2Falcon2Bionano_9653:HG2_PB_SVrefine2PB10Xhap12_14252:HG2_PB_SVrefine2PBcRplusDovetail_7007:HG2_PB_pbsv_19500:HG3_Ill_GATKHCSBGrefine_12453:HG3_Ill_MetaSV_3236:HG3_Ill_SVrefine2DISCOVARDovetail_13614:HG3_PB_SVrefine2Falcon1Dovetail_12123:HG3_PB_SVrefine2PBcRDovetail_9593:HG3_PB_assemblyticsfalcon_16588:HG3_PB_pbsv_19176:HG4_10X_allpass_3446:HG4_Ill_GATKHCSBGrefine_13056:HG4_Ill_MetaSV_3190:HG4_Ill_SVrefine2DISCOVARDovetail_13412:HG4_PB_SVrefine2Falcon1Dovetail_12128:HG4_PB_SVrefine2PBcRDovetail_9803:HG4_PB_assemblyticsfalcon_16335:HG4_PB_pbsv_19428;NumExactMatchSVs=25;ClusterMaxShiftDist=0.0287687;ClusterMaxSizeDiff=0.0287687;ClusterMaxEditDist=0.0287687;PBcalls=16;Illcalls=14;TenXcalls=4;CGcalls=0;PBexactcalls=13;Illexactcalls=9;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-1726;DistBack=35654;DistForward=-1717;DistMin=-1717;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=10;REFWIDENED=22:27168067-27169802;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2382.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:123:1/1:1:21:0:8:1/1:0:24:0:21:1/1:0:30:1/1:3:107:1650:.:.
chr22	27375675	HG2_Ill_Cortex_5258	CCCTTTCTTTCATCCATTCATCTATCCATTATCCATCCACTCTGAAATACTTCATTTCATTTTTAATTCCCCTCCTCCTTCCTTCCTTTATCCCGCCCATCCTT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13585:HG4_Ill_Krunchall_25860:HG3_Ill_Krunchall_25080:HG2_Ill_Krunchall_25552:HG2_Ill_Krunchall_25551:HG3_Ill_Krunchall_25079:HG3_PB_pbsv_19177:HG4_PB_pbsv_19429:HG4_Ill_svaba_23582:HG4_Ill_MetaSV_3191:HG4_Ill_GATKHC_30336:HG4_Ill_GATKHCSBGrefine_13057:HG4_Ill_Cortex_2220:HG4_10X_allpass_3447:HG3_Ill_svaba_23921:HG3_Ill_MetaSV_3237:HG3_Ill_GATKHC_30325:HG3_Ill_GATKHCSBGrefine_12454:HG3_Ill_Cortex_2249:HG3_10X_allpass_3604:HG2_PB_pbsv_19501:HG2_Ill_svaba_23686:HG2_Ill_SpiralSDKrefine_10474:HG2_Ill_MetaSV_3078:HG2_Ill_GATKHC_30414:HG2_Ill_GATKHCSBGrefine_12617:HG2_Ill_Cortex_5258:HG2_10X_allpass_2928:HG2_PB_SVrefine2Falcon1plusDovetail_7560:HG2_PB_HySA_35139:HG2_Ill_SVrefine2DISCOVARplusDovetail_8043;NumClusterSVs=31;ExactMatchIDs=HG2_10X_allpass_2928:HG2_Ill_Cortex_5258:HG2_Ill_GATKHCSBGrefine_12617:HG2_Ill_GATKHC_30414:HG2_Ill_MetaSV_3078:HG2_Ill_SpiralSDKrefine_10474:HG2_Ill_svaba_23686:HG2_PB_pbsv_19501:HG3_10X_allpass_3604:HG3_Ill_Cortex_2249:HG3_Ill_GATKHCSBGrefine_12454:HG3_Ill_GATKHC_30325:HG3_Ill_MetaSV_3237:HG3_Ill_svaba_23921:HG4_10X_allpass_3447:HG4_Ill_Cortex_2220:HG4_Ill_GATKHCSBGrefine_13057:HG4_Ill_GATKHC_30336:HG4_Ill_MetaSV_3191:HG4_Ill_svaba_23582:HG4_PB_pbsv_19429;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0676328;ClusterMaxSizeDiff=0.0676328;ClusterMaxEditDist=0.10628;PBcalls=5;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=2;Illexactcalls=16;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-103;DistBack=50311;DistForward=-78;DistMin=-78;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=60;REFWIDENED=22:27375653-27375815;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2383.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:26:./.:17:12:9:13:0|1:51:0:0:34:0/1:24:28:./.:.:.:.:.:.
chr22	27423653	HG2_Ill_GATKHC_30416	GTATATATATACATATATACACACGTATATATATACATATATACACACGTATATATATACATATATACACACGTATATATATACATATATACACACGTATATATATACATATATACACACGTA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_7008:HG2_PB_HySA_35141:HG2_PB_SVrefine2PB10Xhap12_14253:HG4_PB_assemblyticsfalcon_16338:HG3_PB_assemblyticsfalcon_16590:HG2_PB_assemblyticsfalcon_16670:HG2_PB_SVrefine2Falcon1plusDovetail_7561:HG3_PB_SVrefine2Falcon1Dovetail_12124:HG4_PB_SVrefine2Falcon1Dovetail_12129:HG2_Ill_Krunchall_25554:HG3_Ill_SVrefine2DISCOVARDovetail_13615:HG4_Ill_Krunchall_25862:HG4_Ill_GATKHC_30338:HG4_Ill_GATKHCSBGrefine_13058:HG4_Ill_250bpfermikitraw_24866:HG3_Ill_Krunchall_25082:HG3_Ill_GATKHC_30328:HG3_Ill_GATKHCSBGrefine_12455:HG3_Ill_250bpfermikitraw_24526:HG2_Ill_Krunchall_25553:HG2_Ill_GATKHC_30416:HG2_Ill_GATKHCSBGrefine_12618:HG2_Ill_250bpfermikitraw_25265:HG3_PB_pbsv_19178:HG2_PB_pbsv_19502:HG2_Ill_SVrefine2DISCOVARplusDovetail_8044;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25265:HG2_Ill_GATKHCSBGrefine_12618:HG2_Ill_GATKHC_30416:HG2_Ill_Krunchall_25553:HG3_Ill_250bpfermikitraw_24526:HG3_Ill_GATKHCSBGrefine_12455:HG3_Ill_GATKHC_30328:HG3_Ill_Krunchall_25082:HG4_Ill_250bpfermikitraw_24866:HG4_Ill_GATKHCSBGrefine_13058:HG4_Ill_GATKHC_30338:HG4_Ill_Krunchall_25862;NumExactMatchSVs=12;ClusterMaxShiftDist=0.4;ClusterMaxSizeDiff=0.4;ClusterMaxEditDist=0.4;PBcalls=11;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-122;DistBack=-55;DistForward=-80;DistMin=-80;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=138;REFWIDENED=22:27423593-27423852;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2384.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:26:0|1:34:4:0:21:1|0:0:38:26:1:0/1:41:25:./.:.:.:.:.:.
chr22	29177321	HG2_Ill_MetaSV_3080	TTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_HySA_27977:HG4_PB_assemblyticsfalcon_16351:HG2_PB_SVrefine2PB10Xhap12_14259:HG3_PB_assemblyticsfalcon_16605:HG2_PB_assemblyticsfalcon_16685:HG2_Ill_breakscan11_2795:HG4_PB_SVrefine2PBcRDovetail_9808:HG4_PB_SVrefine2Falcon1Dovetail_12135:HG4_Ill_SVrefine2DISCOVARDovetail_13417:HG4_Ill_GATKHCSBGrefine_13062:HG4_10X_allpass_3448:HG3_PB_SVrefine2Falcon1Dovetail_12129:HG2_PB_pbsv_19507:HG2_PB_SVrefine2Falcon2Bionano_9657:HG2_PB_SVrefine2Falcon1plusDovetail_7566:HG2_Ill_scalpel_17866:HG2_Ill_manta_5133:HG2_Ill_SVrefine2DISCOVARplusDovetail_8050:HG2_Ill_MetaSV_3080:HG2_Ill_GATKHCSBGrefine_12619:HG4_Ill_Spiral_1461:HG4_Ill_MetaSV_3194:HG2_Ill_tnscope_2007:HG2_Ill_Spiral_1229:HG4_PB_pbsv_19437;NumClusterSVs=25;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12619:HG2_Ill_MetaSV_3080:HG2_Ill_SVrefine2DISCOVARplusDovetail_8050:HG2_Ill_manta_5133:HG2_Ill_scalpel_17866:HG2_PB_SVrefine2Falcon1plusDovetail_7566:HG2_PB_SVrefine2Falcon2Bionano_9657:HG2_PB_pbsv_19507:HG3_PB_SVrefine2Falcon1Dovetail_12129:HG4_10X_allpass_3448:HG4_Ill_GATKHCSBGrefine_13062:HG4_Ill_SVrefine2DISCOVARDovetail_13417:HG4_PB_SVrefine2Falcon1Dovetail_12135:HG4_PB_SVrefine2PBcRDovetail_9808;NumExactMatchSVs=14;ClusterMaxShiftDist=0.298781;ClusterMaxSizeDiff=0.298781;ClusterMaxEditDist=0.298781;PBcalls=12;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=7;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-317;DistBack=-937;DistForward=-305;DistMin=-937;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=13;REFWIDENED=22:29177322-29177651;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2385.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:./.:44:12:0|1:38:1:0:11:1|0:0:22:29:0:0/1:21:17:0/1:25:6:.:.:.
chr22	29633086	HG2_PB_SVrefine2PB10Xhap12_14260	TATTTTCTATTTGTTTTCCTTGTTCTTTGTTCCTATTTTTGTCTGCCAGACTTTTTCTGCCTTTTTTTGGCTTTATTTATTTATTTACTTACTTATTTTCTTTTGAGAGAGAGTCTTGCTCTGTCACCCAGGCTGTAGTGCAGTGGTGTGATCTCTGCTACTGCAACCTCTGCCTCTTGGGTTCAAGCAATTCTCTGCCTCAGCCTCCTGAATAGCTGGGACTACAGGCACCTGCCACCCTGCCTGGCTAATTTTTATATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGACTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAGAGTGCTGGGGTTACAGGTGTGAGCCACCATGCCCGGCCATGCTCCTCCTTTCTTTATGTAAAATCTGAGTTTCTGGCCAGGCACGGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCATGAGGTCAGGAGATGGAGACCATCCTGGTGAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAATGTAGCTGGGCGTGCTGGCAGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCATGAACCTGGGGGATGGAGCTTGCAGTGAGTGGAGATCGCGCCACTGCACTGCAGCCTGGGCAACAGAGCGAGACTCCGTTTCAAAAAAAACAAACAAAAAAAATCTGAGTTTCTGACACATAATTTTTGTCCTCTCTGAAGAACTACCTTTATTTTTTCCCAGTTGGCTTTATTTGTGATTCTAGAATCGGGCAACACTTCATTCCATAAAATAAAATAAGTGCTCCGCTGAAGAACTTCTTTTAATGTTTCCTACAAGGCAGATCTACTGACAAAAATTCCCTCACTGTTTGTTTGTCTGAAAGTCTTCATTTCCCTTTCATGCATGAAGGATAATTTTTCAGGGTAAAGAATTCTAGGTTGATGTGTTTTTTTCCTCTCAATACTTGGTATATTACTCTCCACTCTCTTGCTTGCATGGTTTCTGCAGAGTTGGTTGTAATTATTATTGTTGCTCCTCTGCAGGAAAGATATTTTTTCCCTCTGTTTTCTTTTCAGTATTTTTTTATCTTTGATTCTCTGAAGTTTTTCTAAAAATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAGAGATAAGGTCATACTCTGTCACCTCAGAAGCCTTGAGGCTTCTGGGCTCAAGGGATCCTCCCGCCTCCACCTCTCGAGTAGCTGGGACTACTGTCATGTGCCACACCTGGCTAATTTTTTTTTCTGTTTTGAGATGAAATCTCACTCTTGTCCCCAAGGCTGGAGTGCAATGGTGTGATCTTGGCTCACTGCAACCTCCGCTTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAATAGCTGGGATTACAGGCACCTGCCATCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTTCTGACCTCAGGTGATCCGCCCGCCTCGGCCTCCCAAAGTGGTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCATTTTTTTTTTTTTTTTTTTTAATTTTAGAAGCAAGATCTCACTATGTTGCCCAGGCTGGTCTTTCTGACCTCTAGTGATCCTCTTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCACCCAGCCTGATTTTCTGAAATTTGGATATGATATGCCTACTTGTCATTTCTTGGCATTTATCCTATATGGTATTCCCTTATCTTCCTAGATCTGTGGTTTGGTGTCTGACATTTTTGGGGGGAAAATTCTGTCATTATTACTTCAAATATTGCTTGTGTTTCTTTCTCTTTTTTCCTTCTGGTATTCTATTATGCATATTTACATCTTTTGTAATTGTCCCACAATTCTTGGATATTCTGTTCTATTCTTTCAGCCTTTTTTCTCTTTGCATTTCAGTTTTGAAAGTTTCCATTGTCATATCATCAGGCTTAGAGATTCTTTCCTCAGCCATGTCCAGTCCACGAATAAGCCCATCAATGGCATTCTTTATTTCTGTTACAGTGCTTTTTATATCTACCACTTATTTTTAATTATTTCTTAGAATATCTTTTTTTTCTTTTAAAAAAAATTTTTTTTTAATGTAGAGGCAGGGTTTTACCATGTTACCCAGGCTGGTCTCAAACTCCTGAGTTTAAGCAGTCTACCCACCTCAGCCTCCCAAAGTGTTGGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13593:HG3_10X_allpass_3605:HG2_10X_allpass_2929:HG3_PB_assemblyticsfalcon_16609:HG3_Ill_Krunchall_25104:HG2_PB_pbsv_19510:HG2_PB_SVrefine2PBcRplusDovetail_7014:HG2_Ill_Krunchall_25574:HG3_PB_HySA_29022:HG2_Ill_tnscope_2008:HG3_PB_pbsv_19185:HG3_PB_SVrefine2PBcRDovetail_9598:HG3_PB_SVrefine2Falcon1Dovetail_12131:HG3_Ill_MetaSV_3240:HG2_PB_assemblyticsfalcon_16688:HG2_PB_SVrefine2PB10Xhap12_14260:HG2_PB_SVrefine2Falcon2Bionano_9659:HG2_PB_SVrefine2Falcon1plusDovetail_7568:HG2_Ill_MetaSV_3081;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13593:HG3_PB_pbsv_19185:HG3_PB_SVrefine2PBcRDovetail_9598:HG3_PB_SVrefine2Falcon1Dovetail_12131:HG3_Ill_MetaSV_3240:HG2_PB_assemblyticsfalcon_16688:HG2_PB_SVrefine2PB10Xhap12_14260:HG2_PB_SVrefine2Falcon2Bionano_9659:HG2_PB_SVrefine2Falcon1plusDovetail_7568:HG2_Ill_MetaSV_3081;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0109004;ClusterMaxSizeDiff=0.0109004;ClusterMaxEditDist=0.0109004;PBcalls=11;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-2304;DistBack=-2306;DistForward=-2303;DistMin=-2306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=22:29633087-29635393;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2386.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:31:40:./.:19:8:6:15:0|1:53:0:0:26:0/1:63:12:0/1:177:93:2298:.:.
chr22	29695950	HG3_Ill_SVrefine2DISCOVARDovetail_13621	GTTGGGAGGAGCCAGGAAGGGGCACCTGGGGGCTCTGGAAGGGCTTCCTCACCCCTTCCCATTCTAACCGA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13594:HG4_PB_HySA_27985:HG2_PB_pbsv_19511:HG4_PB_pbsv_19442:HG3_PB_pbsv_19186:HG3_PB_HySA_29023:HG2_PB_HySA_35166:HG4_PB_SVrefine2PBcRDovetail_9810:HG4_PB_SVrefine2Falcon1Dovetail_12137:HG4_Ill_svaba_23604:HG4_Ill_scalpel_17452:HG4_Ill_manta_4342:HG4_Ill_SVrefine2DISCOVARDovetail_13419:HG4_Ill_Krunchall_25885:HG4_Ill_GATKHCSBGrefine_13065:HG4_Ill_250bpfermikitraw_24886:HG4_Ill_150bpfermikitraw_23913:HG3_PB_SVrefine2PBcRDovetail_9599:HG3_PB_SVrefine2Falcon1Dovetail_12132:HG3_Ill_svaba_23941:HG3_Ill_scalpel_18224:HG3_Ill_manta_4161:HG3_Ill_SVrefine2DISCOVARDovetail_13621:HG3_Ill_Krunchall_25105:HG3_Ill_GATKHCSBGrefine_12458:HG3_Ill_250bpfermikitraw_24548:HG3_Ill_150bpfermikitraw_23802:HG2_PB_SVrefine2PBcRplusDovetail_7015:HG2_PB_SVrefine2PB10Xhap12_14261:HG2_PB_SVrefine2Falcon2Bionano_9660:HG2_PB_SVrefine2Falcon1plusDovetail_7569:HG2_Ill_svaba_23705:HG2_Ill_scalpel_17872:HG2_Ill_manta_5135:HG2_Ill_SpiralSDKrefine_10488:HG2_Ill_SVrefine2DISCOVARplusDovetail_8055:HG2_Ill_GATKHCSBGrefine_12620:HG2_Ill_250bpfermikitraw_25279:HG2_Ill_150bpfermikitraw_23755;NumClusterSVs=39;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13594:HG4_PB_SVrefine2PBcRDovetail_9810:HG4_PB_SVrefine2Falcon1Dovetail_12137:HG4_Ill_svaba_23604:HG4_Ill_scalpel_17452:HG4_Ill_manta_4342:HG4_Ill_SVrefine2DISCOVARDovetail_13419:HG4_Ill_Krunchall_25885:HG4_Ill_GATKHCSBGrefine_13065:HG4_Ill_250bpfermikitraw_24886:HG4_Ill_150bpfermikitraw_23913:HG3_PB_SVrefine2PBcRDovetail_9599:HG3_PB_SVrefine2Falcon1Dovetail_12132:HG3_Ill_svaba_23941:HG3_Ill_scalpel_18224:HG3_Ill_manta_4161:HG3_Ill_SVrefine2DISCOVARDovetail_13621:HG3_Ill_Krunchall_25105:HG3_Ill_GATKHCSBGrefine_12458:HG3_Ill_250bpfermikitraw_24548:HG3_Ill_150bpfermikitraw_23802:HG2_PB_SVrefine2PBcRplusDovetail_7015:HG2_PB_SVrefine2PB10Xhap12_14261:HG2_PB_SVrefine2Falcon2Bionano_9660:HG2_PB_SVrefine2Falcon1plusDovetail_7569:HG2_Ill_svaba_23705:HG2_Ill_scalpel_17872:HG2_Ill_manta_5135:HG2_Ill_SpiralSDKrefine_10488:HG2_Ill_SVrefine2DISCOVARplusDovetail_8055:HG2_Ill_GATKHCSBGrefine_12620:HG2_Ill_250bpfermikitraw_25279:HG2_Ill_150bpfermikitraw_23755;NumExactMatchSVs=33;ClusterMaxShiftDist=0.028169;ClusterMaxSizeDiff=0.028169;ClusterMaxEditDist=0.0285714;PBcalls=14;Illcalls=24;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=24;TenXexactcalls=1;CGexactcalls=0;HG2count=15;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-70;DistBack=49227;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=70;REFWIDENED=22:29695951-29696090;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2387.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:62:1/1:0:32:1:18:./.:0:1:0:3:1/1:0:45:./.:.:.:.:.:.
chr22	30214392	HG4_Ill_250bpfermikitraw_24893	TACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	T	20	PASS	ClusterIDs=HG2_Ill_breakscan11_2796:HG3_PB_HySA_29025:HG3_PB_pbsv_19187:HG2_PB_pbsv_19515:HG2_PB_HySA_35173:HG4_Ill_svaba_23611:HG4_Ill_SVrefine2DISCOVARDovetail_13424:HG4_Ill_Krunchall_25891:HG4_Ill_GATKHCSBGrefine_13069:HG4_Ill_250bpfermikitraw_24893:HG4_Ill_150bpfermikitraw_23920:HG4_10X_allpass_3449:HG3_PB_SVrefine2PBcRDovetail_9600:HG3_Ill_svaba_23946:HG3_Ill_scalpel_18226:HG3_Ill_manta_4163:HG3_Ill_SVrefine2DISCOVARDovetail_13623:HG3_Ill_Krunchall_25109:HG3_Ill_GATKHC_30354:HG3_Ill_GATKHCSBGrefine_12460:HG3_Ill_250bpfermikitraw_24552:HG3_Ill_150bpfermikitraw_23807:HG2_Ill_svaba_23713:HG2_Ill_scalpel_17877:HG2_Ill_manta_5137:HG2_Ill_SpiralSDKrefine_10491:HG2_Ill_SVrefine2DISCOVARplusDovetail_8060:HG2_Ill_Krunchall_25582:HG2_Ill_GATKHCSBGrefine_12623:HG2_Ill_150bpfermikitraw_23765:HG2_10X_allpass_2930:HG4_PB_pbsv_19446:HG2_PB_SVrefine2PBcRplusDovetail_7016:HG2_PB_SVrefine2PB10Xhap12_14262:HG4_PB_assemblyticsfalcon_16356:HG3_PB_assemblyticsfalcon_16612:HG2_PB_assemblyticsfalcon_16693;NumClusterSVs=37;ExactMatchIDs=HG2_10X_allpass_2930:HG2_Ill_150bpfermikitraw_23765:HG2_Ill_GATKHCSBGrefine_12623:HG2_Ill_Krunchall_25582:HG2_Ill_SVrefine2DISCOVARplusDovetail_8060:HG2_Ill_SpiralSDKrefine_10491:HG2_Ill_manta_5137:HG2_Ill_scalpel_17877:HG2_Ill_svaba_23713:HG3_Ill_150bpfermikitraw_23807:HG3_Ill_250bpfermikitraw_24552:HG3_Ill_GATKHCSBGrefine_12460:HG3_Ill_GATKHC_30354:HG3_Ill_Krunchall_25109:HG3_Ill_SVrefine2DISCOVARDovetail_13623:HG3_Ill_manta_4163:HG3_Ill_scalpel_18226:HG3_Ill_svaba_23946:HG3_PB_SVrefine2PBcRDovetail_9600:HG4_10X_allpass_3449:HG4_Ill_150bpfermikitraw_23920:HG4_Ill_250bpfermikitraw_24893:HG4_Ill_GATKHCSBGrefine_13069:HG4_Ill_Krunchall_25891:HG4_Ill_SVrefine2DISCOVARDovetail_13424:HG4_Ill_svaba_23611;NumExactMatchSVs=26;ClusterMaxShiftDist=0.148148;ClusterMaxSizeDiff=0.148148;ClusterMaxEditDist=0.148148;PBcalls=11;Illcalls=24;TenXcalls=2;CGcalls=0;PBexactcalls=1;Illexactcalls=23;TenXexactcalls=2;CGexactcalls=0;HG2count=15;HG3count=13;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-56;DistBack=55110;DistForward=9396;DistMin=9396;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=19;REFWIDENED=22:30214393-30214467;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2388.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:28:0|1:15:0:1:26:./.:28:0:1:13:0/1:14:19:./.:.:.:.:.:.
chr22	31419872	HG3_PB_SVrefine2PBcRDovetail_9604	ACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGGGGTTGCAGTGAGCCGCGATCGTGCCATTGCACTCCAACCTGGGCGACAGAGCGAGACTTGGTCTCCAGAAAAAAAAAAGAAATCCTAACCTTGTAGGAATGCAGCCCAGTAGGTCTCAATCTTATTGTACCCAGCCCTTATTCAAGATGGAGTCACTCTGGTCCAAATGCCTCTGACAATGGGATTACAGGCATCCACCACAATGCCCAGCTAAGGCCCCATCTCTTAATACTGTTACACTGGGGATTCTGTTTCCAACACGTGAACTTTTTGAGGACACATTCAAATCATCGCATGGGAAAGCATCCAGTCTTTTCTGCATTAAGTATGTTAGCTGTAGGTTTTTCATAGATGCCCTTTATCACTTGAGGGAGCTCCCTTCTATTGCTACTTCATGTGTGTTTTTGTCATGAAATAATGTTAGAGGTTGTCAAATGCTTTTTCTGCATCTATAGAGATGATTGTGTAGTTTTTATAATTTATGCTATTGATATTATGTGTTGTATAAATTGATGTTTGGATGCTTAGCAAACTTGGCATTCTGTGACATAACCCACTTGGTCATGCTGTATATGTTGTTGGGTTCTAGCCCTTTATTTATTTATTTATTTATTTATTTTTTGAGACAGAGTCTCGCTCTTTCACCTCCGCCTCCTGCTTCAGCTTCCTGAGTAGCTGGGATTACAGGCGCCCACCACCATGCCCAGTCTAGCCCATTTTAAAATTGGGTAGTCTTCTAATTATGAGTTGTAATATTTACTTGTATATTGTGGATACAAGTCCCTTATTAAATATATTATTTGAAAATATTTTCTCCCACGTTTTTCTTTTCATCATTTTATAAATGAGTCTTGGCCGGGCACAGTGGCTCATG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8067:HG3_PB_pbsv_19191:HG2_PB_HySA_35192:HG2_PB_pbsv_19518:HG3_Ill_manta_4166:HG3_Ill_GATKHCSBGrefine_12464:HG3_10X_allpass_3606:HG2_Ill_MetaSV_3083:HG2_Ill_GATKHCSBGrefine_12628:HG3_Ill_MetaSV_3242:HG3_PB_HySA_29037:HG3_PB_SVrefine2PBcRDovetail_9604:HG3_Ill_SVrefine2DISCOVARDovetail_13628:HG2_PB_SVrefine2PB10Xhap12_14265:HG2_PB_SVrefine2Falcon1plusDovetail_7573;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8067:HG3_PB_SVrefine2PBcRDovetail_9604:HG3_Ill_SVrefine2DISCOVARDovetail_13628:HG2_PB_SVrefine2PB10Xhap12_14265:HG2_PB_SVrefine2Falcon1plusDovetail_7573;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0470465;ClusterMaxSizeDiff=0.0470465;ClusterMaxEditDist=0.0480418;PBcalls=7;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-935;DistBack=5345;DistForward=-881;DistMin=-881;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=80;REFWIDENED=22:31419873-31420887;PctSeqSimilarity=0.9734;PctSizeSimilarity=1;PctRecOverlap=0.9541;SizeDiff=0;StartDistance=-43;EndDistance=-43;GTMatch=0;TruScore=97;MatchId=2389.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:25:40:1|0:0:32:25:0:./.:6:23:69:0:0/1:61:7:0/1:104:32:.:.:.
chr22	31510970	HG3_Ill_GATKHC_30366	AAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATAT	A	20	PASS	ClusterIDs=HG4_PB_pbsv_19451:HG4_Ill_svaba_23623:HG3_PB_assemblyticsfalcon_16624:HG4_PB_assemblyticsfalcon_16368:HG4_Ill_svaba_23624:HG3_Ill_svaba_23953:HG3_Ill_GATKHC_30366:HG3_Ill_GATKHCSBGrefine_12465:HG3_Ill_150bpfermikitraw_23818:HG2_Ill_svaba_23723:HG2_Ill_GATKHCSBGrefine_12629:HG3_Ill_Spiral_19454:HG2_Ill_Spiral_1230:HG4_Ill_scalpel_17462:HG4_Ill_GATKHC_30379:HG4_Ill_GATKHCSBGrefine_13074:HG4_Ill_150bpfermikitraw_23933:HG3_Ill_svaba_23952:HG2_Ill_svaba_23722;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12629:HG2_Ill_svaba_23723:HG3_Ill_150bpfermikitraw_23818:HG3_Ill_GATKHCSBGrefine_12465:HG3_Ill_GATKHC_30366:HG3_Ill_svaba_23953:HG4_Ill_svaba_23624:HG4_PB_assemblyticsfalcon_16368;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0594059;ClusterMaxSizeDiff=0.0594059;ClusterMaxEditDist=0.257426;PBcalls=3;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=-75;DistForward=-47;DistMin=-75;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=22:31510969-31511022;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2390.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:./.:26:10:4:26:./.:0:2:10:0:0/1:5:10:./.:.:.:.:.:.
chr22	31987851	HG2_PB_SVrefine2PBcRplusDovetail_7021	CCCTCACCTCCCAGACGGGGTGGCTGGCCGGGCAGGGGGGCTGACCCCCCCCACCTCCCTCCCAGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCTCACCTCCCTCCCGGATGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACGGGGCGGCTGGCCAGGCGGAGGGCTGACCCCCCCA	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9666:HG3_PB_assemblyticsfalcon_16630:HG2_PB_assemblyticsfalcon_16705:HG2_PB_pbsv_19523:HG4_PB_SVrefine2Falcon1Dovetail_12142:HG3_PB_SVrefine2Falcon1Dovetail_12139:HG2_PB_SVrefine2Falcon1plusDovetail_7575:HG4_PB_pbsv_19456:HG3_PB_pbsv_19193:HG2_PB_SVrefine2PBcRplusDovetail_7021:HG2_PB_SVrefine2PB10Xhap12_14268;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_9666:HG2_PB_SVrefine2PBcRplusDovetail_7021:HG2_PB_SVrefine2PB10Xhap12_14268;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0216383;ClusterMaxSizeDiff=0.0216383;ClusterMaxEditDist=0.0337423;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-326;DistBack=94;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=366;REFWIDENED=22:31987545-31988236;PctSeqSimilarity=0.9427;PctSizeSimilarity=0.9908;PctRecOverlap=0.7584;SizeDiff=3;StartDistance=-79;EndDistance=-76;GTMatch=0;TruScore=89;MatchId=2391.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:33:1/1:0:15:0:12:./.:2:0:2:0:./.:7:0:./.:4:3:.:.:.
chr22	33000495	HG2_Ill_250bpfermikitraw_25306	ATCCCGTCTCATACTCATGTCTCCGCTGAGATACCCTCCCTCACACTCTTTTCTAGGCCAG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8080:HG2_PB_pbsv_19528:HG4_Ill_svaba_23639:HG4_Ill_scalpel_17470:HG4_Ill_manta_4349:HG4_Ill_Krunchall_25913:HG4_Ill_GATKHC_30398:HG4_Ill_GATKHCSBGrefine_13081:HG4_Ill_250bpfermikitraw_24916:HG4_Ill_150bpfermikitraw_23946:HG2_Ill_svaba_23735:HG2_Ill_manta_5141:HG2_Ill_Krunchall_25601:HG2_Ill_GATKHC_30471:HG2_Ill_GATKHCSBGrefine_12633:HG2_Ill_250bpfermikitraw_25306:HG2_Ill_150bpfermikitraw_23783:HG4_PB_HySA_28015:HG4_PB_pbsv_19464;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23783:HG2_Ill_250bpfermikitraw_25306:HG2_Ill_GATKHCSBGrefine_12633:HG2_Ill_GATKHC_30471:HG2_Ill_Krunchall_25601:HG2_Ill_manta_5141:HG2_Ill_svaba_23735:HG4_Ill_150bpfermikitraw_23946:HG4_Ill_250bpfermikitraw_24916:HG4_Ill_GATKHCSBGrefine_13081:HG4_Ill_GATKHC_30398:HG4_Ill_Krunchall_25913:HG4_Ill_manta_4349:HG4_Ill_scalpel_17470:HG4_Ill_svaba_23639;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0166667;ClusterMaxSizeDiff=0.0165289;ClusterMaxEditDist=0.0666667;PBcalls=3;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=0;HG4count=10;NumTechs=2;NumTechsExact=1;SVLEN=-60;DistBack=18576;DistForward=16355;DistMin=16355;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=22:33000453-33000583;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2392.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:22:10:./.:15:3:6:6:0|1:20:2:0:8:0/1:17:17:./.:.:.:.:.:.
chr22	33295758	HG4_Ill_GATKHCSBGrefine_13083	TAAAACAAGGAAGTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATATAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCGGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAA	T	20	PASS	ClusterIDs=HG3_Ill_Spiral_19470:HG3_PB_assemblyticsfalcon_16644:HG2_PB_assemblyticsfalcon_16715:HG4_PB_assemblyticsfalcon_16382:HG2_PB_assemblyticsPBcR_16196:HG2_PB_HySA_35217:HG4_Ill_Krunchall_25918:HG3_Ill_Krunchall_25129:HG2_Ill_Krunchall_25607:HG4_PB_pbsv_19465:HG2_PB_pbsv_19530:HG4_PB_HySA_28019:HG4_Ill_MetaSV_3200:HG3_PB_HySA_29056:HG3_Ill_MetaSV_3245:HG2_Ill_tnscope_2009:HG2_Ill_MetaSV_3086:HG4_PB_SVrefine2PBcRDovetail_9821:HG4_PB_SVrefine2Falcon1Dovetail_12149:HG4_Ill_svaba_23641:HG4_Ill_scalpel_17473:HG4_Ill_manta_4350:HG4_Ill_SVrefine2DISCOVARDovetail_13442:HG4_Ill_GATKHCSBGrefine_13083:HG4_10X_allpass_3451:HG3_PB_pbsv_19204:HG3_PB_SVrefine2PBcRDovetail_9611:HG3_PB_SVrefine2Falcon1Dovetail_12145:HG3_Ill_svaba_23966:HG3_Ill_scalpel_18241:HG3_Ill_manta_4168:HG3_Ill_SVrefine2DISCOVARDovetail_13640:HG3_Ill_GATKHCSBGrefine_12472:HG3_10X_allpass_3608:HG2_PB_SVrefine2PBcRplusDovetail_7026:HG2_PB_SVrefine2PB10Xhap12_14274:HG2_PB_SVrefine2Falcon2Bionano_9672:HG2_PB_SVrefine2Falcon1plusDovetail_7580:HG2_Ill_svaba_23738:HG2_Ill_scalpel_17893:HG2_Ill_manta_5142:HG2_Ill_SVrefine2DISCOVARplusDovetail_8082:HG2_Ill_GATKHCSBGrefine_12635:HG2_10X_allpass_2931:HG4_Ill_Spiral_1463;NumClusterSVs=45;ExactMatchIDs=HG2_10X_allpass_2931:HG2_Ill_GATKHCSBGrefine_12635:HG2_Ill_SVrefine2DISCOVARplusDovetail_8082:HG2_Ill_manta_5142:HG2_Ill_scalpel_17893:HG2_Ill_svaba_23738:HG2_PB_SVrefine2Falcon1plusDovetail_7580:HG2_PB_SVrefine2Falcon2Bionano_9672:HG2_PB_SVrefine2PB10Xhap12_14274:HG2_PB_SVrefine2PBcRplusDovetail_7026:HG3_10X_allpass_3608:HG3_Ill_GATKHCSBGrefine_12472:HG3_Ill_SVrefine2DISCOVARDovetail_13640:HG3_Ill_manta_4168:HG3_Ill_scalpel_18241:HG3_Ill_svaba_23966:HG3_PB_SVrefine2Falcon1Dovetail_12145:HG3_PB_SVrefine2PBcRDovetail_9611:HG3_PB_pbsv_19204:HG4_10X_allpass_3451:HG4_Ill_GATKHCSBGrefine_13083:HG4_Ill_SVrefine2DISCOVARDovetail_13442:HG4_Ill_manta_4350:HG4_Ill_scalpel_17473:HG4_Ill_svaba_23641:HG4_PB_SVrefine2Falcon1Dovetail_12149:HG4_PB_SVrefine2PBcRDovetail_9821;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0864;ClusterMaxSizeDiff=0.0864;ClusterMaxEditDist=0.0864;PBcalls=18;Illcalls=24;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=17;HG3count=14;HG4count=14;NumTechs=3;NumTechsExact=3;SVLEN=-318;DistBack=649;DistForward=3451;DistMin=649;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=22:33295759-33296090;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2393.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:48:1/1:1:26:0:10:1/1:0:14:0:12:1/1:0:46:0/1:3:13:.:.:.
chr22	33751615	HG2_CG_vcfBeta_10886	TCTCAAAAGTAGATCTTCTAACTCCTCCTGGACCACCCTTTCTCTGCCTAGCCCTCCGGCTTTCTGAGGCCCAGTGTTAATATCATGCACCTGAGCCTTCTATAGGGGAGGCTCTCAGTTAGTGGCTCAATGTCCATGGTCGCCAAATACTG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_19468:HG3_PB_HySA_29060:HG2_PB_pbsv_19534:HG3_PB_assemblyticsfalcon_16649:HG2_PB_assemblyticsfalcon_16721:HG4_Ill_Krunchall_25921:HG3_Ill_Krunchall_25136:HG2_Ill_Krunchall_25613:HG2_PB_HySA_35220:HG4_PB_assemblyticsfalcon_16386:HG4_PB_SVrefine2PBcRDovetail_9823:HG4_PB_SVrefine2Falcon1Dovetail_12151:HG4_Ill_svaba_23642:HG4_Ill_scalpel_17475:HG4_Ill_manta_4351:HG4_Ill_SVrefine2DISCOVARDovetail_13444:HG4_Ill_GATKHCSBGrefine_13085:HG4_10X_allpass_3452:HG3_PB_SVrefine2PBcRDovetail_9613:HG3_PB_SVrefine2Falcon1Dovetail_12147:HG3_Ill_svaba_23971:HG3_Ill_scalpel_18246:HG3_Ill_SVrefine2DISCOVARDovetail_13643:HG3_Ill_GATKHCSBGrefine_12474:HG3_10X_allpass_3610:HG2_PB_assemblyticsPBcR_16201:HG2_PB_SVrefine2PBcRplusDovetail_7027:HG2_PB_SVrefine2PB10Xhap12_14276:HG2_PB_SVrefine2Falcon2Bionano_9674:HG2_PB_SVrefine2Falcon1plusDovetail_7582:HG2_Ill_svaba_23740:HG2_Ill_scalpel_17896:HG2_Ill_manta_5143:HG2_Ill_SpiralSDKrefine_10506:HG2_Ill_SVrefine2DISCOVARplusDovetail_8085:HG2_Ill_MetaSV_3087:HG2_Ill_GATKHCSBGrefine_12637:HG2_Ill_250bpfermikitraw_25316:HG2_Ill_150bpfermikitraw_23791:HG2_CG_vcfBeta_10886:HG2_10X_allpass_2932:HG3_PB_pbsv_19207;NumClusterSVs=42;ExactMatchIDs=HG2_10X_allpass_2932:HG2_CG_vcfBeta_10886:HG2_Ill_150bpfermikitraw_23791:HG2_Ill_250bpfermikitraw_25316:HG2_Ill_GATKHCSBGrefine_12637:HG2_Ill_MetaSV_3087:HG2_Ill_SVrefine2DISCOVARplusDovetail_8085:HG2_Ill_SpiralSDKrefine_10506:HG2_Ill_manta_5143:HG2_Ill_scalpel_17896:HG2_Ill_svaba_23740:HG2_PB_SVrefine2Falcon1plusDovetail_7582:HG2_PB_SVrefine2Falcon2Bionano_9674:HG2_PB_SVrefine2PB10Xhap12_14276:HG2_PB_SVrefine2PBcRplusDovetail_7027:HG2_PB_assemblyticsPBcR_16201:HG3_10X_allpass_3610:HG3_Ill_GATKHCSBGrefine_12474:HG3_Ill_SVrefine2DISCOVARDovetail_13643:HG3_Ill_scalpel_18246:HG3_Ill_svaba_23971:HG3_PB_SVrefine2Falcon1Dovetail_12147:HG3_PB_SVrefine2PBcRDovetail_9613:HG4_10X_allpass_3452:HG4_Ill_GATKHCSBGrefine_13085:HG4_Ill_SVrefine2DISCOVARDovetail_13444:HG4_Ill_manta_4351:HG4_Ill_scalpel_17475:HG4_Ill_svaba_23642:HG4_PB_SVrefine2Falcon1Dovetail_12151:HG4_PB_SVrefine2PBcRDovetail_9823:HG4_PB_assemblyticsfalcon_16386;NumExactMatchSVs=32;ClusterMaxShiftDist=0.0264901;ClusterMaxSizeDiff=0.0264901;ClusterMaxEditDist=0.04;PBcalls=17;Illcalls=21;TenXcalls=3;CGcalls=1;PBexactcalls=10;Illexactcalls=18;TenXexactcalls=3;CGexactcalls=1;HG2count=20;HG3count=11;HG4count=11;NumTechs=4;NumTechsExact=4;SVLEN=-151;DistBack=10834;DistForward=3789;DistMin=3789;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=22:33751616-33751768;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2395.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:65:1/1:1:21:0:24:1/1:0:13:0:16:1/1:0:43:./.:.:.:.:.:.
chr22	33780448	HG3_PB_SVrefine2Falcon1Dovetail_12149	TTCTTCCAATGAGGCTCCACAGTATGGGGCACCTGTTTTGGAGACGAATACACCTGGGTTCAAGCCTAGGACCTGCCAGTTACTCGATAGGAGACATGAAACCATCTCTCTGAGACCTCCTTGTTGTATGGAGACTGGTCATACAGGCCTCAAAGGACTGTTGGAAGGAGTAAGTGATGAGGGCAGGGAGAGCCTAGCATTGTATGGAGATGGACAGTGGTGGTGGCCGCACAACAATGTGAATGGACTTCATGCCGCTCAACTGTACGTTTAAACATGGTTAACACGGTAAATTTATGTTATGTATATCTCACCACAATAATGAAAAAAAAGATTCTAGCTCTGCACTGGATACAGAGCACATTCCTTATAGACATTAGGTTCTCTCCTGTGTTTTTCCCCAGAGATATGACCACCTACCTAGGTTGAGCTGATAGGTGGAATTTGTACGATGTATACCATTTATCCGTACACACAAAAGCAGCTCCTCTGTGACTTTATTCTGGGTATGGCTTTGCCAATTTGCTTGATGATTACTGACAAGCCATATGGGCCTGTCTCAGTCTTCCTGATTTCAAGAGGGTCTTTTTGGCCCATCCACGCTGGGTCTTTAAGGTGAGCTCCAGAAGCCTGTGAGCTCATAAGAAACTAATAATAAGAGGTGGTTCCTCTTCCTTGGTATCTTTTCTTGGTTACTTTCTGCGGAAGGGACCTGGGTGAATGGAGGGTTGTTTAGGGAGGGAAACTCCCCTTGTCTATATCCTTTTGTGTTTTTTAAAACGCTAAAACAACAGCCGGGTGTGGTGGTGGTTCATGCCTGTAAACCCAGCACTTTGGGAGGGGAGGTGGGTGGATCACCTGAGGTCAGATTAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATGCAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTGATCCCAGTTACTTGGGAGGCTGAGGCAGGAGAATCACTCGAACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCACGGCACTCCAGCCTGGACGACAGCGCAGGACACCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTAAAACAACTAAACATATTATTCAGGCAAAAAATAAATACATCAGTTAAAATCTAAAAAAGAAAAATACACTTAGGCTTAGCTGAATGGCTGAGAAGCAACTATCTACCATCAGGTCAGTTAGAGCAAGCAGAAAAAGCCCTGAGCACGGAACACAAAAAGCCGAGAGAATTTCCCTGCAGGCCACTGCAGTCAATTTGGTGGGTGGAACTGTAGCACCCAGAGGCCCCCAAATCAATCCTCTTCAGGATGCTTAGCTCAGCAGAATGGTCAGTGGGGAAGACTCAAGGCAGTTGAAAAATGATCTTAGTTGAAACCTAGCACCTGCATTTCCAAGACTCTAGGAAAGAAACTGATTTCCCCAAATCACATACAAATGTCAACTCTAAGCCTCTTTACTTATTCCAGTGGCACATATTTGGAGAAAAGATATATTCACCATTTAGTGAAAGGTGTTTGGCCAGGTGGAGTTGGAAAAAAAATAGTATCTATATGGCTATGGGAAGATTGGGTTAATACACAGAGATCTGAACTTGTAAGTCTGAAGGACAAATTAGATCTGCTGCATAGGTCCTTTGTGCTTTGTTAGGGTTTTTGCACATCACGTATCATTTCCCCTAATGCTCCCTGAGATCTCTACAAGATAGATTTTGTTATCCTTATTTTATAGGTGAGGAAACTGAGGGGCTAAATCGGACACTTGTCAATTCACTGTTCAAAAGTAGCTATGTCAGATTCAAACTCAGATCTGCGTGATTCCAAGGCCAGTGCTTCTTCCACTCAACCACATAGACTAGAGCCCCAGCAATGTCACTTTGGAGCCATGGGACTCAGGTCAAGATCTGTCTTTTGTTGACTCTCAGTTTCTATGAGTGTTAAATGAGAAAAATGCTACTTGCCCTGCACAGCTCAGAAAACTGTTGCGCACTCTTGTGGTAGGCTGGTAATGTTTAACCATCAGCTCTCTGGGGGAAAAAAACGGCCGGATTTGTAGCATTTGCCAATTGCCAAGGTGTAAACACTCCCATCATGGCTAATTTCAAGCTAGCAATATCATATCACTGAATATGGAGTTGGGGAGGAAGGTACACAGTGGAAATTGTTCGCCATAAATGTATTATCTGATTGTTTTACTCAGATAAACAATGTTGGGGGGGGTAGAAAGAAAAGAAACATTTACAAAGTTACAAACCAAGAGAATATAGTGATGTAAGTCACTGGTGACTGATTTAAGAAAATATATTCCAGTCAAAAATATGAATGAAGCCGGGCATGGTGGCTCACACCTGTGACCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCTAGGCATTGTGGTGTGTGCTTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAAGTGCTTGAATCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATTGTGCCACTGTACTCCAGCCTAGGTAACTGAGCAAGACTCCATCTCAAAAAACAAAAAACAAAAAACAAAAAACAAAAAAAGGGCGGGCAGGTGTGGTGGCTCATGCCTGTAATCTCAGCACTTTGGGAGGCCAAGGTGCACAGATCATCTGAAGTCAGGAGTCCAAGACCAGCCCCGCCAACATGGCGAAACCCCACCTCTACTAAAAATACAAAAAAACTAGCCGGGTGTGGTGGTGCACGCCTGTAGTCCCAGCTACTCCTGAGGCTGAGGCACAAGAATAGCTTGAACCCA	AGAT	20	PASS	ClusterIDs=HG2_10X_allpass_2933:HG4_PB_pbsv_19470:HG3_PB_pbsv_19208:HG2_PB_pbsv_19535:HG2_PB_HySA_35221:HG3_10X_allpass_3611:HG2_Ill_tnscope_2010:HG2_Ill_SpiralSDKrefine_10507:HG4_PB_assemblyticsfalcon_16388:HG4_PB_SVrefine2PBcRDovetail_9825:HG4_PB_SVrefine2Falcon1Dovetail_12153:HG3_PB_SVrefine2PBcRDovetail_9614:HG3_PB_SVrefine2Falcon1Dovetail_12149:HG2_PB_SVrefine2PB10Xhap12_14277:HG2_PB_SVrefine2Falcon2Bionano_9675:HG2_PB_SVrefine2Falcon1plusDovetail_7583:HG2_PB_PB10Xdip_19478:HG4_10X_allpass_3454:HG2_Ill_MetaSV_3088:HG3_PB_assemblyticsfalcon_16650:HG2_PB_assemblyticsfalcon_16722:HG4_Ill_MetaSV_3202:HG3_Ill_MetaSV_3246;NumClusterSVs=23;ExactMatchIDs=HG2_PB_PB10Xdip_19478:HG2_PB_SVrefine2Falcon1plusDovetail_7583:HG2_PB_SVrefine2Falcon2Bionano_9675:HG2_PB_SVrefine2PB10Xhap12_14277:HG3_PB_SVrefine2Falcon1Dovetail_12149:HG3_PB_SVrefine2PBcRDovetail_9614:HG4_PB_SVrefine2Falcon1Dovetail_12153:HG4_PB_SVrefine2PBcRDovetail_9825:HG4_PB_assemblyticsfalcon_16388;NumExactMatchSVs=9;ClusterMaxShiftDist=0.00725013;ClusterMaxSizeDiff=0.00725013;ClusterMaxEditDist=0.00725013;PBcalls=15;Illcalls=5;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-2887;DistBack=20402;DistForward=-2891;DistMin=-2891;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=22:33780448-33783338;PctSeqSimilarity=1;PctSizeSimilarity=0.999;PctRecOverlap=1;SizeDiff=-3;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2396.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:45:0|1:47:0:0:24:1|0:1:25:38:0:0/1:34:6:0/1:222:89:2934:.:.
chr22	34069804	HG2_Ill_svaba_23742	TCCTGGGTTACACGACCACGCCCAGCTAATTTTGTGTGTTGTGGGTGTATTTTTAGTAGATACGGGGTTTCGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCATGTGATCCACCTG	T	20	PASS	ClusterIDs=HG2_10X_allpass_2934:HG4_PB_assemblyticsfalcon_16390:HG4_PB_SVrefine2Falcon1Dovetail_12155:HG3_PB_SVrefine2PBcRDovetail_9616:HG3_Ill_SVrefine2DISCOVARDovetail_13646:HG2_PB_SVrefine2Falcon1plusDovetail_7585:HG2_PB_SVrefine2PB10Xhap12_14279:HG2_PB_assemblyticsfalcon_16725:HG3_PB_HySA_29064:HG3_Ill_Krunchall_25137:HG3_PB_SVrefine2Falcon1Dovetail_12151:HG3_PB_assemblyticsfalcon_16652:HG3_PB_pbsv_19210:HG4_PB_pbsv_19472:HG2_PB_pbsv_19537:HG3_Ill_MetaSV_3247:HG4_Ill_svaba_23644:HG4_Ill_MetaSV_3203:HG4_Ill_GATKHC_30405:HG4_Ill_GATKHCSBGrefine_13086:HG4_10X_allpass_3455:HG3_Ill_svaba_23973:HG3_Ill_scalpel_18248:HG3_Ill_manta_4169:HG3_Ill_GATKHC_30394:HG3_Ill_GATKHCSBGrefine_12475:HG3_10X_allpass_3612:HG2_Ill_svaba_23742:HG2_Ill_breakscan11_2797:HG2_Ill_SpiralSDKrefine_10509:HG2_Ill_MetaSV_3089:HG2_Ill_GATKHC_30484:HG2_Ill_GATKHCSBGrefine_12639;NumClusterSVs=33;ExactMatchIDs=HG2_10X_allpass_2934:HG4_Ill_svaba_23644:HG4_Ill_MetaSV_3203:HG4_Ill_GATKHC_30405:HG4_Ill_GATKHCSBGrefine_13086:HG4_10X_allpass_3455:HG3_Ill_svaba_23973:HG3_Ill_scalpel_18248:HG3_Ill_manta_4169:HG3_Ill_GATKHC_30394:HG3_Ill_GATKHCSBGrefine_12475:HG3_10X_allpass_3612:HG2_Ill_svaba_23742:HG2_Ill_breakscan11_2797:HG2_Ill_SpiralSDKrefine_10509:HG2_Ill_MetaSV_3089:HG2_Ill_GATKHC_30484:HG2_Ill_GATKHCSBGrefine_12639;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0655738;ClusterMaxSizeDiff=0.0655738;ClusterMaxEditDist=0.120968;PBcalls=12;Illcalls=18;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=11;HG3count=14;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-121;DistBack=22576;DistForward=1;DistMin=1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=120;REFWIDENED=22:34069805-34070045;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2397.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:36:0|1:25:3:0:32:1|0:0:17:36:2:0/1:25:16:./.:.:.:.:.:.
chr22	35459002	HG2_PB_SVrefine2Falcon2Bionano_9679	GGGGTGGAAGTGGCAGAGGCAAAAAGAGAGAGGCGATGGAGCCCTTTCTCTCTGCTGGGCCTCGTGCCTGCAGCTGTGTGCTCACCGTTTCACTTAATCCATTCAACAGCCTGATCAATTAGGTGTCATTAATGCCATTTAACAGCTGAGGAGACATGCCCAGAGAAGTGGAGTGATAGGACAGCTAGCCACTAGAAGCAGCAAGATTCAAACCCAGGTGAGTCTGGCTCTGCACCTCACATCCCTCCCACTTTGCTGTAATACCCAGAGACCATCTGGCTCAGCCCTCTCATTTCACAGGTGAAGAACTGAGCAGCAGCGAGAGAAATTGCCAGAGTTACACCTGTTGTTTTCAGCACCTTGTTTGATTTCCTTTCATTTTGCCTCTTTCCAAGGTGTGACTGGCCCCTGGACAGGTTA	AATGGGGGC	20	PASS	ClusterIDs=HG2_PB_pbsv_19545:HG4_Ill_GATKHCSBGrefine_13093:HG3_Ill_GATKHCSBGrefine_12484:HG2_Ill_GATKHCSBGrefine_12645:HG4_PB_HySA_28042:HG2_PB_HySA_35252:HG3_10X_allpass_3613:HG2_Ill_tnscope_2011:HG4_PB_assemblyticsfalcon_16404:HG4_PB_SVrefine2PBcRDovetail_9830:HG4_PB_SVrefine2Falcon1Dovetail_12160:HG4_Ill_SVrefine2DISCOVARDovetail_13454:HG3_PB_SVrefine2Falcon1Dovetail_12156:HG2_PB_assemblyticsPBcR_16223:HG2_PB_SVrefine2PBcRplusDovetail_7032:HG2_PB_SVrefine2PB10Xhap12_14284:HG2_PB_SVrefine2Falcon2Bionano_9679:HG2_PB_SVrefine2Falcon1plusDovetail_7588:HG2_PB_PB10Xdip_19488:HG2_Ill_SVrefine2DISCOVARplusDovetail_8098:HG2_10X_allpass_2935:HG4_Ill_MetaSV_3205:HG2_Ill_MetaSV_3092:HG4_Ill_Spiral_1464:HG3_Ill_Spiral_19491:HG2_Ill_Spiral_1231:HG4_Ill_Krunchall_25945:HG3_Ill_Krunchall_25158:HG2_Ill_Krunchall_25634:HG3_PB_assemblyticsfalcon_16664:HG2_PB_assemblyticsfalcon_16744:HG4_PB_pbsv_19476:HG3_PB_pbsv_19217;NumClusterSVs=33;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8098:HG2_PB_PB10Xdip_19488:HG2_PB_SVrefine2Falcon1plusDovetail_7588:HG2_PB_SVrefine2Falcon2Bionano_9679:HG2_PB_SVrefine2PB10Xhap12_14284:HG2_PB_SVrefine2PBcRplusDovetail_7032:HG2_PB_assemblyticsPBcR_16223:HG3_PB_SVrefine2Falcon1Dovetail_12156:HG4_Ill_SVrefine2DISCOVARDovetail_13454:HG4_PB_SVrefine2Falcon1Dovetail_12160:HG4_PB_SVrefine2PBcRDovetail_9830:HG4_PB_assemblyticsfalcon_16404;NumExactMatchSVs=12;ClusterMaxShiftDist=0.155811;ClusterMaxSizeDiff=0.155811;ClusterMaxEditDist=0.155811;PBcalls=17;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=10;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=16;HG3count=7;HG4count=10;NumTechs=3;NumTechsExact=2;SVLEN=-411;DistBack=-420;DistForward=-408;DistMin=-420;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=22:35459002-35459421;PctSeqSimilarity=0.9952;PctSizeSimilarity=0.9904;PctRecOverlap=0.9905;SizeDiff=-4;StartDistance=-4;EndDistance=0;GTMatch=0;TruScore=99;MatchId=2398.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:80:1/1:2:23:0:38:1/1:1:28:1:31:1/1:1:31:./.:2:24:.:.:.
chr22	35645164	HG4_10X_allpass_3456	GCCTCGGCCTCCTGAGTAGCTGGAATTACAGGCACCTACCACCACGCCTGTCTAATTTTTGTATTTTTAGTAGAAACGGGATTTCACCATGTTGACCAGGCTGGTCCCGAACTCCTGACCTCAGGTAATCCACCCACCTCAGCCTCCCCCAAGTACTGGGATTACAAGCGTGAGCCACTGCACCTGGCCTTTAATTTTCTTTCTTTAATAATAAATTAACCTTGCTACTGTAACTTTTTTACTTTATAAACTTTTTAATTTTTTTTAACTTCTTGACTCTTACCAATATTTTGTACTGCATGTAATCAAATATGGGCTATACTGCTTCTCCTGCAAATAGGTGATCAGAACATGGACAGGAAAGACACACCAATTTCTATTCCTCTGAGAAGGGTGCTGGGGATAGATCTGGGGCCTAAACTGTGTTCATGTGTTTTCTTAACTAAAACAATTTTTTTAAAAAAAAGAATCTGAAGCCATTATAGTAGAATAATGTTAATATGTATTCACTCTGGGTGGTGGGTACATGGATGTTTGTACTTTGAAATATCTTCGCATTTTTAAATATTATTCTGTGAAAAGAAGGGGAAGACAAAATGTAAAATGTTACTGCTATTTTAGAATTTGTCTAGCAGGTTTTCCGGTCTTCACCAGAAAACCCCTAGAAAGAAAAAGAAAAGAAAAAAAAATATTTTAATGGAGAGAGTCACCATGAGATACAAATGCACAGATGGGAGGGAGAGGCAGCAGTTCTGGAGGAGAAGGTAGGGGCTGGCCCAGGTCCTTCCAGGTTAAGTACAAACCCTCAGCATGTTCCCAACCTTCCCTGAGAACTCTCAGGAACTGACGCCACATACCAGAAAATGCCACTGCTTGTCATTCCAAAGACACAAGGCAGTACTGACCCTCCTTACCTCCTTTCACCCAGTTTCTCCCATCAGGAATGTCCTCCCATCCTACCCCACCACATTCCAAC	G	20	PASS	ClusterIDs=HG2_PB_pbsv_19547:HG2_10X_allpass_2936:HG3_PB_assemblyticsfalcon_16668:HG2_PB_assemblyticsfalcon_16748:HG4_PB_assemblyticsfalcon_16408:HG2_PB_assemblyticsPBcR_16227:HG4_Ill_Spiral_1465:HG3_Ill_Spiral_19495:HG2_Ill_tnscope_2012:HG2_Ill_Spiral_1232:HG4_PB_pbsv_19478:HG4_PB_SVrefine2PBcRDovetail_9832:HG4_PB_SVrefine2Falcon1Dovetail_12161:HG4_Ill_manta_4353:HG4_Ill_SVrefine2DISCOVARDovetail_13456:HG4_Ill_MetaSV_3206:HG4_Ill_GATKHCSBGrefine_13095:HG4_10X_allpass_3456:HG3_PB_pbsv_19219:HG3_PB_SVrefine2PBcRDovetail_9621:HG3_PB_SVrefine2Falcon1Dovetail_12157:HG3_Ill_manta_4170:HG3_Ill_SVrefine2DISCOVARDovetail_13657:HG3_Ill_MetaSV_3251:HG3_Ill_GATKHCSBGrefine_12486:HG3_10X_allpass_3614:HG2_PB_SVrefine2PBcRplusDovetail_7034:HG2_PB_SVrefine2PB10Xhap12_14286:HG2_PB_SVrefine2Falcon2Bionano_9681:HG2_PB_SVrefine2Falcon1plusDovetail_7590:HG2_Ill_manta_5145:HG2_Ill_SVrefine2DISCOVARplusDovetail_8101:HG2_Ill_MetaSV_3093:HG2_Ill_GATKHCSBGrefine_12647:HG3_Ill_Krunchall_25161;NumClusterSVs=35;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12647:HG2_Ill_MetaSV_3093:HG2_Ill_SVrefine2DISCOVARplusDovetail_8101:HG2_Ill_manta_5145:HG2_PB_SVrefine2Falcon1plusDovetail_7590:HG2_PB_SVrefine2Falcon2Bionano_9681:HG2_PB_SVrefine2PB10Xhap12_14286:HG2_PB_SVrefine2PBcRplusDovetail_7034:HG3_10X_allpass_3614:HG3_Ill_GATKHCSBGrefine_12486:HG3_Ill_MetaSV_3251:HG3_Ill_SVrefine2DISCOVARDovetail_13657:HG3_Ill_manta_4170:HG3_PB_SVrefine2Falcon1Dovetail_12157:HG3_PB_SVrefine2PBcRDovetail_9621:HG3_PB_pbsv_19219:HG4_10X_allpass_3456:HG4_Ill_GATKHCSBGrefine_13095:HG4_Ill_MetaSV_3206:HG4_Ill_SVrefine2DISCOVARDovetail_13456:HG4_Ill_manta_4353:HG4_PB_SVrefine2Falcon1Dovetail_12161:HG4_PB_SVrefine2PBcRDovetail_9832:HG4_PB_pbsv_19478;NumExactMatchSVs=24;ClusterMaxShiftDist=0.00410256;ClusterMaxSizeDiff=0.00410256;ClusterMaxEditDist=0.00410678;PBcalls=15;Illcalls=17;TenXcalls=3;CGcalls=0;PBexactcalls=10;Illexactcalls=12;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=11;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-975;DistBack=52588;DistForward=29552;DistMin=29552;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=2;REFWIDENED=22:35645165-35646141;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2399.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:59:1/1:0:21:0:19:1/1:0:29:0:31:1/1:0:38:1/1:3:59:1637:.:.
chr22	36133507	HG3_10X_allpass_3616	GAGTGAGACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTACAAGGAATAACTTGAGATTTTCCAATTTTTTTTTTAACTTAAGATCTAAGCACGCTTAAGTGCCAAAGGGACTATTGAGAGGAAGAGGCAAACCAGGCAAGGGAGGAAACTGAAGCAAAGCACCGAGCAGGTGGGAAAGGCTGGGATGCAGAGCACAGGTGTGGGGTTCACGGTGATGTGAAGAATGCCTCTAATAGAACGAGAGAGAAGGGGAAAGACACCCTGTGTGGAATTCAAGTAGGCTTGTAGATCTGGTAGGGAAACTTCATTCAGGGAGACTATGTCTGACAACCTCCATATTCTGTGAAATAGGAAGCATGATGATCTCATATGGTGAAGTGAAGGGAGTTAGAGATTTATGGATTATGGAGAATTTCAGAGATTTGGGAATTATTGGCTGAGAAACGAAACAAATGCAGCAAGGGATGGGTTTCAGCACAGGTAAGAAAGAAAAGAGGCCAGGTGTGCTGGCTCATGCCTGTAATGCCAGCACTTTGGGAGGCTGAGGTGGGAGGATCACTTGAGGCCAGGAGTTCGAGACCAGCCTGGGCAACACAGTGTAGCCCCATCTCTACAAAAAATGTTGCCGGGTGTGGTGGCGTGCACCTGTAGTTCCAGCTTCTCGGGAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAGTTTGAGGCTACAGTGAGCCTTGATCACACCACTGCACTCCAGCCTGGGCGACAC	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7597:HG2_PB_assemblyticsfalcon_16761:HG2_PB_assemblyticsPBcR_16240:HG3_Ill_Krunchall_25170:HG2_Ill_Krunchall_25644:HG2_PB_HySA_35274:HG3_PB_pbsv_19226:HG3_PB_SVrefine2Falcon1Dovetail_12163:HG3_Ill_MetaSV_3253:HG3_Ill_GATKHCSBGrefine_12490:HG3_10X_allpass_3616:HG2_PB_pbsv_19555:HG2_Ill_MetaSV_3095:HG2_Ill_GATKHCSBGrefine_12652:HG2_10X_allpass_2937:HG2_Ill_breakscan11_2800:HG3_PB_assemblyticsfalcon_16681:HG2_Ill_tnscope_2013:HG4_PB_SVrefine2Falcon1Dovetail_12167:HG3_PB_SVrefine2PBcRDovetail_9626:HG3_Ill_SVrefine2DISCOVARDovetail_13664:HG2_PB_SVrefine2PBcRplusDovetail_7041:HG2_PB_SVrefine2PB10Xhap12_14293:HG2_PB_SVrefine2Falcon2Bionano_9688;NumClusterSVs=24;ExactMatchIDs=HG2_10X_allpass_2937:HG2_Ill_GATKHCSBGrefine_12652:HG2_Ill_MetaSV_3095:HG2_PB_pbsv_19555:HG3_10X_allpass_3616:HG3_Ill_GATKHCSBGrefine_12490:HG3_Ill_MetaSV_3253:HG3_PB_SVrefine2Falcon1Dovetail_12163;NumExactMatchSVs=8;ClusterMaxShiftDist=0.178353;ClusterMaxSizeDiff=0.178353;ClusterMaxEditDist=0.178353;PBcalls=13;Illcalls=9;TenXcalls=2;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-766;DistBack=38529;DistForward=-758;DistMin=-758;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=66;REFWIDENED=22:36133480-36134311;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2401.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:36:./.:18:19:6:5:0|1:52:0:0:20:0/1:27:17:0/1:61:17:.:.:.
chr22	37127073	HG4_Ill_scalpel_17505	TTGTTTTTTGTTTTTTTTTATTTTTTTTTATTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGG	T	20	PASS	ClusterIDs=HG4_PB_pbsv_19490:HG4_Ill_Krunchall_25963:HG4_PB_assemblyticsfalcon_16425:HG2_PB_assemblyticsPBcR_16245:HG3_PB_assemblyticsfalcon_16687:HG2_PB_assemblyticsfalcon_16768:HG2_Ill_Krunchall_25649:HG3_PB_pbsv_19231:HG2_PB_HySA_35288:HG3_PB_HySA_29096:HG2_PB_HySA_35287:HG4_PB_SVrefine2Falcon1Dovetail_12172:HG4_PB_SVrefine2PBcRDovetail_9837:HG4_PB_HySA_28061:HG4_Ill_svaba_23676:HG4_Ill_scalpel_17505:HG4_Ill_SVrefine2DISCOVARDovetail_13462:HG4_Ill_MetaSV_3213:HG4_Ill_GATKHCSBGrefine_13102:HG4_10X_allpass_3457:HG3_PB_SVrefine2PBcRDovetail_9629:HG3_PB_SVrefine2Falcon1Dovetail_12166:HG3_Ill_svaba_24008:HG3_Ill_scalpel_18280:HG3_Ill_SVrefine2DISCOVARDovetail_13667:HG3_Ill_MetaSV_3254:HG3_Ill_GATKHCSBGrefine_12493:HG3_Ill_250bpfermikitraw_24619:HG3_Ill_150bpfermikitraw_23878:HG3_10X_allpass_3618:HG2_PB_SVrefine2PBcRplusDovetail_7045:HG2_PB_SVrefine2PB10Xhap12_14299:HG2_PB_SVrefine2Falcon2Bionano_9690:HG2_PB_SVrefine2Falcon1plusDovetail_7602:HG2_Ill_svaba_23770:HG2_Ill_scalpel_17917:HG2_Ill_manta_5146:HG2_Ill_SVrefine2DISCOVARplusDovetail_8108:HG2_Ill_MetaSV_3097:HG2_Ill_GATKHCSBGrefine_12658:HG2_Ill_250bpfermikitraw_25350:HG2_Ill_150bpfermikitraw_23821:HG2_10X_allpass_2938:HG2_PB_pbsv_19560;NumClusterSVs=44;ExactMatchIDs=HG2_10X_allpass_2938:HG2_Ill_150bpfermikitraw_23821:HG2_Ill_250bpfermikitraw_25350:HG2_Ill_GATKHCSBGrefine_12658:HG2_Ill_MetaSV_3097:HG2_Ill_SVrefine2DISCOVARplusDovetail_8108:HG2_Ill_manta_5146:HG2_Ill_scalpel_17917:HG2_Ill_svaba_23770:HG2_PB_SVrefine2Falcon1plusDovetail_7602:HG2_PB_SVrefine2Falcon2Bionano_9690:HG2_PB_SVrefine2PB10Xhap12_14299:HG2_PB_SVrefine2PBcRplusDovetail_7045:HG3_10X_allpass_3618:HG3_Ill_150bpfermikitraw_23878:HG3_Ill_250bpfermikitraw_24619:HG3_Ill_GATKHCSBGrefine_12493:HG3_Ill_MetaSV_3254:HG3_Ill_SVrefine2DISCOVARDovetail_13667:HG3_Ill_scalpel_18280:HG3_Ill_svaba_24008:HG3_PB_SVrefine2Falcon1Dovetail_12166:HG3_PB_SVrefine2PBcRDovetail_9629:HG4_10X_allpass_3457:HG4_Ill_GATKHCSBGrefine_13102:HG4_Ill_MetaSV_3213:HG4_Ill_SVrefine2DISCOVARDovetail_13462:HG4_Ill_scalpel_17505:HG4_Ill_svaba_23676:HG4_PB_HySA_28061:HG4_PB_SVrefine2PBcRDovetail_9837;NumExactMatchSVs=31;ClusterMaxShiftDist=0.187879;ClusterMaxSizeDiff=0.187879;ClusterMaxEditDist=0.224924;PBcalls=19;Illcalls=22;TenXcalls=3;CGcalls=0;PBexactcalls=8;Illexactcalls=20;TenXexactcalls=3;CGexactcalls=0;HG2count=19;HG3count=13;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-172;DistBack=24801;DistForward=6869;DistMin=6869;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=16;REFWIDENED=22:37127074-37127261;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2402.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:61:1/1:0:18:0:16:1/1:0:15:0:12:1/1:0:51:./.:.:.:.:.:.
chr22	37143113	HG2_PB_SVrefine2PBcRplusDovetail_7046	GGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCTTCCCAAGTAGCTAGGATTACAGACGCCCGCCACCGCGCCCAACTAATTTTTGTGTTTTTAGTAGAGTTGGAGTTTCACCATGTTGGCCAAGTTGGTCTTGAACTCTTGACCTCCAGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCTCGGCTGGAAACTCTTTTCCCCGTGCTCCCTTCACTCAGTGCCCAGGAGTTCTGGCCTTTTGTGGGCCAACCTCCTCTGCCGCAGGACCCTCAAACATGCTATTTCCTCTGGCTAATGTACAACTCCCCGTTCACTGCCTGACTCCTGCTCCTTCATGTCTCCACAGAGAGGCTGCTGCTGGACACCTCCTCCCTGCTAAGACTCCTTTGGAGTCTTGTATAGAGGGTTCTGTTCTTTTCTTTCCAGTGATTTTTACAACCTGTGGTTTTCTACGGGATTGCAAACTGACTTATTGTCTCTCTCCCTCACCAGCTTGTGTGCTCCATGGAGCAAGGAGTAGGAGGCTCATCTGCCCTGTCCAGCTCTTAAGCCCCTGCACCTACAGCGGGGCCTGGCTGGTGGCTGGTGGTCAAAAAGCCAGGGCCTGTTGAGACACAGGGGCTCTGTGTCGAGGCTGCTCCTTAAACGCTTCTTGCCTGCACGCTGTGCGTGGAAACCCAAAGAAGTGAGAGACGCGAGGACTCCAGGGATTGCTAACCCACTAGTGTCATGCCAGAGGCCCCAAGGCAAAGGCGCTCTCAGCCAGGGCAAGAGACCGACTGGGCTCAGGCCTCCTAGCCCCTGCTGGGCCTCTCTCCAGTCCTCTCTGGGGCCATGGCAAGCCACTCTTCCCAGGGGTCACTCACCGGGGACCCAGGCCTCCTAGTCCCAGAGCTCCTTTGGACGAAGGGTGGAGGGCAGCAGACTCCACCCCTGGGATTATCCAGGATAGGGTCACAACAGCAGCGGCAACAACCGAAACAATAGGGTGAGCGGCGAGTGTCCCACTCAGCAGGGGCTGGGGGGTCTGCAGCTATCGCCAGGCTGTGAACCCTCAGCAAACATCTGAAGTAGGTGATGTTAGGGCCCAGAGAGGCGAAGTGACTTGTCCAAGGCCACTCAGTGAGGTAGAGCTGAGCAAAGACTCGCACCCAGAGGCTGTGTGATTCCAAAGCCTTGGGTGCCGCGTGCAGGTGAAACCGCCCCACATTGCTTCTCGACCGTCACCACCTTCTGCCCCTGAGATCAGCAAGCACCTGCAGGGAGGTGGTTGGGAAGGGCCTGACCTTCCTCTGGAGGTTTCCTGAGATTCACAGAGTCTGACGGTAGCTGTGACATCGCTAGGAGCCTGCACTGGGGAACGCAGGTCATGGGCCCATTGCGTCCTCAGCCGTAACGTAAAACAGTTGCCTTGGCTTCCTGGGGTGGCTGTGAAGGTTGAGTGAGAGGAAACACGCTGGAAGAGGCTTTGGGGGAGATTCTGGGAGCACAGTGTGGCTCACAGGGGTTCAAGCCCCTGCTTGTACCTTGCATTCAGCTTGCCCCTGGGCAAGGTTGCTGCTGTTGGAATCTACAATGAGGCAATGAGCCAGGAGGCAAAAAAGACTCACAGATGTCGAGAAGGAGCCTGAGGTCACAAGAAGCAGCCAAGTGTCATGTCATCTGTCTGGGGTGCATTTTCTTCTTTTGCGCAGTGGGACACAAACAGCCACTTTAAAGAGTTGCCATGTGAAATAAAATCAAGATACAATGTATGAGCTGCTGATTTTTTTGAAAATAATAGGATACTTGTTCATGCAACTTTCTTCTTTGCTTAAAAACTTCCTTTCATACTGCAAGAATCCACCATAATCTAGAGGGTACATGCCTTAAACAATTTTTTAATTGATATATCATAGTTGTACATATTTTGGGGGGGTATATGTGATATTTTGACTGTCTGCTTTTAATTTAAATGCCATCTGATAAATGATATGGTGACCAGGGGATTTCTGGACTTGGCACTATGAACTCAGTACAGTCCTTATCTCAGAGTATTTGATGCTTACTGTTGGAATGGCTTGGTCAATTGAAAATTAGGTCATTTGGGCCGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATGACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCCAACTCTACTAAAAATACAAAAATTATCCGGGTGTAGTGGCAGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGCTAATCACTTGAACCCAGGAAGTGGAGGTTGCAGTGAGCCGAGATTGTGCCATTGCACTCCAGCCTGGGCAACAAGAATGAGACTTCATCTCAAAAAAAAAGAAAAAGAAAATTAGGTCATTTTTATCCACGGACTAGTTCTTTTTTGGGTACTTGTAATCAACATATAAATATACTAGTGTGAACCGGAGAGGGTACATTGAAGGTAAGCAATGCATCATGGCGTCCACCCAAGAGGGAACCTCCAACAGCACAGGCTGTAGGGCCAGAACCAGCCTGTTCTCCATTTTTGTGTGTAGTTCCATGCTTCAAATGTATCTTAATTTTATTTGCTTTTCTCAAACCTGAAATAAATTTTAGTTTTTAGCTATAGCAAAAACAAAAAAAATAAAAACAAAACAAAATAAAAACAAACAAAAAAAACAAACAATGCAGCAGCAGCCGCCACAGCAAGGTCATTGCTCCCACACATGGGTCTCCTTCCCGCCCTCTCCCTGTCCTTAGCGAGGTCCCAGTGCTGAACGCACCCTGACCTTTGGTGGTAGAGATCTTTGCTCCTAGTGGGATCCTACAACTCTCAGAACAACAGGGTCCCCCTGGACTGTGAGCACAGTAGAACCAGCTCTTTCTTGGGATTTTAAGAAAACAGACAAGCTTCGCGCACAGCTGGGTTGCAGCAGTTTTTTTCTTTTCCTTCTTTTTTTTGCTTTCAGCCGTGGCAGCCTGCTCTTGATTTCTCTGGAAAGGCAGCTCCTAATTAGAATGGATCGAAGAGTCTTTGCTTCAGCTTTGTTCTCGGTCTCGACTGAATCGTTGCTTTAGGGCTTAATCTGGTGCAGCCGCTGGTTGGTTGATACCCTTGGTTCTCTGAGCTCCTCTCTGGCTCGGGCAGGCTGGCACCCAGGGGGCACCAGAGCTCTGCAGTGTCACTCTGCTCCCTCTCACTCCAGCCCTCTCTTCCTTCTCTCTTTTTCTCTCCACCTGCCTTCTCTCTCTCTAATTTCTTTTCATTAACGACCCAGAGCTGTCCAGGGTGCCAGTCCCCACTCCTAGGAGTGTAAACTGGTACAATTTATCTGGAGGGCAATTTGTCAAATGCTATTAAAAGCTTTTTTAAAAAAGTACGTAGACTTTGACTTGGAATGTCCCTTTCTAGGAATGTATGTCCTGCAGAAATAATTGGACAGGGGTCCACAGATATGTGCAAGGGGACACTGTCCTTGGCTGTTTTCCTGAGTGACCACCTGGAAACCTGGTGTCCTTCAACTGGAAATCATTATGCGTGGGTCACGTAATAAACCAACTGCAAAAGAACCTTTGGGAGTAAATCAGGGAAATTTGACTGTGGACTGAACAGTAGATGCTCCTAAAGAATTACTATTAATTTTATGTGGTGTGATAATGGCTTTGTGGTTGGTTTAGAGGCAGTGACTGGAGGGCTGGCATTTGGTTTAAACGATCGTAACCACCACCATCATGGCAGGGGAGCAGGACAGAGCAAGTGCGGCAGGATCTTGGAAGTTCCGAATCTGGCTGTCAGGTAAATGAGCGTTCATCATGCTGTTCTGTTTTTGTGTAGGTTTTACAATTCTCACGATTTAAAAAGAAATAAAAAGACCATGTAAAATCACATATATATCATATATATGATATATATGGGATATATATATCATATATGATCATATATATCATATATGATCATATATGATCATATATATGATATATATGAGATATATGAGATATATGAGATATGATATATATGAGATATATATGATATATATGAGATATACATGATACATATATGCATCATATATATGATACATATATGTATCATATATATGTATATATGATACATATATGATATATATGATACATATATGATTTATATATCATATATATGATATATATGATTTATATATGATATATATGATATATATGAGATATATGAGATATATATGATATATATGATATATATGATACATATGATATATATGATATATATGATACATATGATATATATGTTATATATGATATATATGATATATATGTTATATATGATATATATGATATGATATATATGTGATATATGATATGATATATATGTGATATATGATATGATATATATGTGATATATATATGATGTATATCACATATATATCATATATATATCATATATGTCACATATATATCATATATATCATATATATCATATATGTCATATATATCATATATATCATATATATATCATATATATCATATATATATCACATATATGATATATATCATATATATCACATATATCACATATATATGATATATATCATATATATCACATATCATATATATGATATATATATCATATATATGTGATATATATGATACATATATTTGAGACAGAGTCTC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8109:HG3_PB_pbsv_19232:HG2_PB_pbsv_19561:HG4_PB_assemblyticsfalcon_16427:HG2_PB_assemblyticsPBcR_16247:HG3_PB_assemblyticsfalcon_16688:HG2_PB_assemblyticsfalcon_16770:HG3_10X_allpass_3619:HG2_10X_allpass_2939:HG4_10X_allpass_3458:HG2_PB_HySA_35291:HG4_PB_HySA_28063:HG4_Ill_MetaSV_3214:HG4_Ill_GATKHCSBGrefine_13103:HG3_Ill_MetaSV_3255:HG3_Ill_GATKHCSBGrefine_12494:HG2_Ill_MetaSV_3098:HG2_Ill_GATKHCSBGrefine_12659:HG2_Ill_tnscope_2014:HG2_PB_HySA_35290:HG4_PB_pbsv_19491:HG4_PB_SVrefine2PBcRDovetail_9838:HG4_PB_SVrefine2Falcon1Dovetail_12173:HG4_Ill_SVrefine2DISCOVARDovetail_13463:HG3_PB_SVrefine2PBcRDovetail_9630:HG3_PB_SVrefine2Falcon1Dovetail_12167:HG3_Ill_SVrefine2DISCOVARDovetail_13668:HG2_PB_SVrefine2PBcRplusDovetail_7046:HG2_PB_SVrefine2PB10Xhap12_14300:HG2_PB_SVrefine2Falcon2Bionano_9691:HG2_PB_SVrefine2Falcon1plusDovetail_7603;NumClusterSVs=31;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8109:HG4_PB_pbsv_19491:HG4_PB_SVrefine2PBcRDovetail_9838:HG4_PB_SVrefine2Falcon1Dovetail_12173:HG4_Ill_SVrefine2DISCOVARDovetail_13463:HG3_PB_SVrefine2PBcRDovetail_9630:HG3_PB_SVrefine2Falcon1Dovetail_12167:HG3_Ill_SVrefine2DISCOVARDovetail_13668:HG2_PB_SVrefine2PBcRplusDovetail_7046:HG2_PB_SVrefine2PB10Xhap12_14300:HG2_PB_SVrefine2Falcon2Bionano_9691:HG2_PB_SVrefine2Falcon1plusDovetail_7603;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0961663;ClusterMaxSizeDiff=0.0961663;ClusterMaxEditDist=0.0961663;PBcalls=18;Illcalls=10;TenXcalls=3;CGcalls=0;PBexactcalls=9;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-4726;DistBack=8980;DistForward=36784;DistMin=8980;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=222;REFWIDENED=22:37143114-37148061;PctSeqSimilarity=0.9123;PctSizeSimilarity=1;PctRecOverlap=0.9882;SizeDiff=0;StartDistance=-56;EndDistance=-56;GTMatch=0;TruScore=96;MatchId=2403.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:133:1/1:0:18:0:17:./.:1:7:2:13:0/1:8:39:1/1:8:342:4751:.:.
chr22	37196055	HG2_PB_SVrefine2PB10Xhap12_14301	TCCATCCCCCCACCCATCCACCCATTCATCCATCGTCCATTCACCCACCCATCCATCCATTTACCCATCTGCCCACCCATCTACTCACCCATCCATCTATCCATCTATCCACCCACCCATCCACCCACCCATTCATCTACCCACCCATCCATCCATCCATTCATCCA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8110:HG2_PB_pbsv_19562:HG4_PB_pbsv_19492:HG4_PB_assemblyticsfalcon_16429:HG4_PB_SVrefine2PBcRDovetail_9839:HG4_PB_SVrefine2Falcon1Dovetail_12174:HG4_Ill_manta_4354:HG2_PB_SVrefine2PB10Xhap12_14301:HG2_PB_assemblyticsPBcR_16249:HG2_PB_SVrefine2PBcRplusDovetail_7047:HG4_Ill_SVrefine2DISCOVARDovetail_13464:HG2_PB_SVrefine2Falcon2Bionano_9692;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14301:HG4_Ill_manta_4354:HG4_PB_SVrefine2Falcon1Dovetail_12174:HG4_PB_SVrefine2PBcRDovetail_9839:HG4_PB_assemblyticsfalcon_16429;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0733945;ClusterMaxSizeDiff=0.0302115;ClusterMaxEditDist=0.140673;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-166;DistBack=1260;DistForward=-133;DistMin=-133;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7526;REFWIDENED=22:37188737-37205926;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:36:./.:34:15:5:17:./.:6:30:109:15:0/1:15:11:./.:.:.:.:.:.
chr22	37905677	HG3_Ill_manta_4174	GGTACCTGCTGCAGGCCCTCCTGACCCCCCCTCAACCCCCATGGCCACGAGGCCCAGCCCTGGTACCTGCTGCAGGTCCTTCTGACCTCCCCCGACCCCCATGCCCATGGGCCCCAGCCCTGGTACCTGCTGCAGGCCCTCCTGACCTCCTGCCAGCCTGTGCCCACAAGCCCCAGCCCTGGTACCTACCGCAGGCCCTCCTGACCACCCCCCACCCCCGTGCCCATGGGCCCCAGCCCTGGTACCTGCTGCAGGCCCTCCTGACCTCCTGCCAGCCTGTGCCCACAAGCCCCAGCCCTGGTACCTACCGCAGGCCCTCCTGACCACCCCCCACCCCCGTGCCCATGGGCCCCAGCCCTGGTACCTGCTGCAGGCCCTCCTGAGCCCCGCTACCCAGCCTGTGCCCAGAAGCCCTGGCCCTGCTACCTGCTGCAGGCCTTCCTGATCCCCCACCCCGCAGCCTGTGCCCACAAGCCCCA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8115:HG4_PB_assemblyticsfalcon_16440:HG3_PB_assemblyticsfalcon_16702:HG2_Ill_Krunchall_25660:HG4_Ill_Krunchall_25974:HG2_PB_HySA_35297:HG3_Ill_Spiral_19518:HG2_Ill_Spiral_1234:HG3_PB_pbsv_19240:HG2_PB_pbsv_19569:HG4_PB_pbsv_19499:HG4_PB_SVrefine2Falcon1Dovetail_12180:HG4_Ill_manta_4355:HG4_Ill_MetaSV_3215:HG4_10X_allpass_3459:HG3_PB_SVrefine2Falcon1Dovetail_12173:HG3_Ill_manta_4174:HG3_Ill_GATKHCSBGrefine_12498:HG2_Ill_GATKHCSBGrefine_12663:HG2_10X_allpass_2940:HG3_Ill_MetaSV_3256:HG2_Ill_MetaSV_3100:HG2_Ill_tnscope_2015:HG4_PB_SVrefine2PBcRDovetail_9847:HG3_Ill_SVrefine2DISCOVARDovetail_13671:HG2_PB_SVrefine2PBcRplusDovetail_7054:HG2_PB_SVrefine2PB10Xhap12_14309:HG2_PB_SVrefine2Falcon2Bionano_9698:HG2_PB_SVrefine2Falcon1plusDovetail_7610;NumClusterSVs=29;ExactMatchIDs=HG2_10X_allpass_2940:HG2_Ill_GATKHCSBGrefine_12663:HG3_Ill_GATKHCSBGrefine_12498:HG3_Ill_manta_4174:HG3_PB_SVrefine2Falcon1Dovetail_12173:HG4_10X_allpass_3459:HG4_Ill_MetaSV_3215:HG4_Ill_manta_4355:HG4_PB_SVrefine2Falcon1Dovetail_12180:HG4_PB_pbsv_19499;NumExactMatchSVs=10;ClusterMaxShiftDist=0.031348;ClusterMaxSizeDiff=0.031348;ClusterMaxEditDist=0.0667362;PBcalls=13;Illcalls=14;TenXcalls=2;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=2;CGexactcalls=0;HG2count=13;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-478;DistBack=-20;DistForward=-390;DistMin=-390;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=161;REFWIDENED=22:37905606-37906244;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2405.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:63:1/1:3:31:1:22:1/1:0:13:0:15:1/1:0:35:./.:2:14:.:.:.
chr22	39497639	HG2_Ill_GATKHC_30556	GGGGGGTGGGGGCGGGTTGGAGGAGGTTGGCGGGGGGCGGGGGCGGGTTGGAGGAGGTTGGCA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_19581:HG3_PB_pbsv_19255:HG3_Ill_svaba_24030:HG3_Ill_GATKHC_30478:HG3_Ill_GATKHCSBGrefine_12503:HG2_Ill_svaba_23791:HG2_Ill_GATKHC_30556;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_GATKHC_30556:HG2_Ill_svaba_23791:HG3_Ill_GATKHCSBGrefine_12503:HG3_Ill_GATKHC_30478:HG3_Ill_svaba_24030:HG3_PB_pbsv_19255;NumExactMatchSVs=6;ClusterMaxShiftDist=0.015748;ClusterMaxSizeDiff=0.015748;ClusterMaxEditDist=0.0314961;PBcalls=2;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-62;DistBack=-27;DistForward=20028;DistMin=-27;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=61;REFWIDENED=22:39497590-39497712;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2407.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:22:0|1:26:5:2:17:./.:0:8:23:3:./.:1:1:./.:.:.:.:.:.
chr22	40794223	HG2_Ill_MetaSV_3105	GGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGGGCCCAGCCTGTCATCTGATTCTCTAATGTAAGGGTCAGGACTTTTTCCCCCACTGTTGTGTCCCAGCTCTTAGAAGCTGCCTGGCTCTTAGGGGTGCTCAGTCCCCATTTGCTGATGAATGAATGAGTGGGAGGACAGCCAAGATCAGGAAAGGGGAGGGACTCCTGAGTGGGCCTTCCCAGCCCCTTCAGGCCTCCACAGCCAGATGTAGCTGATTTCTCTGCTACAAGCAGCCTGCAGGTGCTCTGTCACACTTTTACTCTGCCCTTTCAGAACCACCAACCAAACCCCTGCCTCTGGGGCCGATGGTGATGAGGAGTCTTTCTCATGCTCTCAACTGGGACATGTTATGTGGAACCATACACAGTTGTCATTTTTCTAGGCTGTAATGGATGAATATCGGCAATTTAATATGGTTCAACATAGTTTTTAGTATACCTCAATGAGGAGGGTCCATATATTAACAATAACTTTCTAAAAATTTTTAGGACTACTAATTGCCTGATACTTATTGAGTACTTATATGTGTCAGGCAGTGTGCTAAAGGCCTTATTTGCATCAGCTCACGTAATCCTCATAACCACAGTAAGGCATAGGTATTATTATTCCATTCTATCGAAAAGAAAACTGATACAGACGTGAAGTAAACTTGCCCACGGTTATAACAAGTGGGCACAGGCCCACTCTGCTACACGAGTAGCAGAGCTAGGATTGGACTGGAGATGTCTTTACTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGGGCAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTTGTGCCTCAGCCTCTCAAGTAGCTGCGATTACAGGGATGCATCACCATGCCTGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGGTGGCCAAGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCGCCCACCTCA	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9649:HG2_10X_allpass_2943:HG3_PB_HySA_29143:HG2_PB_pbsv_19592:HG3_PB_pbsv_19268:HG3_Ill_MetaSV_3260:HG3_10X_allpass_3623:HG2_Ill_MetaSV_3105:HG2_Ill_GATKHCSBGrefine_12673:HG2_PB_HySA_35321:HG2_PB_SVrefine2Falcon2Bionano_9715:HG2_PB_SVrefine2PB10Xhap12_14331:HG2_PB_SVrefine2PBcRplusDovetail_7071:HG2_Ill_SVrefine2DISCOVARplusDovetail_8135;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12673:HG2_Ill_MetaSV_3105:HG3_10X_allpass_3623:HG3_Ill_MetaSV_3260;NumExactMatchSVs=4;ClusterMaxShiftDist=0.117159;ClusterMaxSizeDiff=0.117159;ClusterMaxEditDist=0.142857;PBcalls=8;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-1019;DistBack=11656;DistForward=-1018;DistMin=-1018;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=287;REFWIDENED=22:40793984-40795289;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:14:0|1:30:0:0:13:1|0:0:28:57:0:0/1:42:19:0/1:82:37:.:.:.
chr22	42140478	HG3_Ill_manta_4178	GCTATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCTCTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCTTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8140:HG3_PB_HySA_29155:HG2_PB_HySA_35332:HG4_Ill_MetaSV_3220:HG2_Ill_tnscope_2016:HG2_Ill_MetaSV_3107:HG4_Ill_scalpel_17535:HG4_Ill_manta_4361:HG4_Ill_GATKHCSBGrefine_13114:HG4_10X_allpass_3461:HG3_PB_pbsv_19279:HG3_Ill_scalpel_18315:HG3_Ill_manta_4178:HG3_Ill_GATKHCSBGrefine_12511:HG3_10X_allpass_3624:HG2_PB_pbsv_19603:HG2_Ill_scalpel_17947:HG2_Ill_manta_5152:HG2_Ill_breakscan11_2802:HG2_Ill_GATKHCSBGrefine_12675:HG2_10X_allpass_2944:HG4_PB_HySA_28104:HG4_PB_pbsv_19534:HG4_PB_SVrefine2PBcRDovetail_9857:HG4_PB_SVrefine2Falcon1Dovetail_12203:HG4_Ill_SVrefine2DISCOVARDovetail_13483:HG3_PB_SVrefine2PBcRDovetail_9655:HG3_PB_SVrefine2Falcon1Dovetail_12195:HG3_Ill_SVrefine2DISCOVARDovetail_13701:HG2_PB_SVrefine2PBcRplusDovetail_7080:HG2_PB_SVrefine2PB10Xhap12_14340:HG2_PB_SVrefine2Falcon2Bionano_9720:HG2_PB_SVrefine2Falcon1plusDovetail_7634;NumClusterSVs=33;ExactMatchIDs=HG2_10X_allpass_2944:HG2_Ill_GATKHCSBGrefine_12675:HG2_Ill_breakscan11_2802:HG2_Ill_manta_5152:HG2_Ill_scalpel_17947:HG2_PB_pbsv_19603:HG3_10X_allpass_3624:HG3_Ill_GATKHCSBGrefine_12511:HG3_Ill_manta_4178:HG3_Ill_scalpel_18315:HG3_PB_pbsv_19279:HG4_10X_allpass_3461:HG4_Ill_GATKHCSBGrefine_13114:HG4_Ill_manta_4361:HG4_Ill_scalpel_17535;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0275651;ClusterMaxSizeDiff=0.0275651;ClusterMaxEditDist=0.125574;PBcalls=14;Illcalls=16;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=10;TenXexactcalls=3;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=28094;DistForward=-323;DistMin=-323;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=313;REFWIDENED=22:42140179-42140813;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2411.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:34:1/1:0:6:0:10:1/1:0:23:0:14:1/1:0:53:./.:2:20:.:.:.
chr22	42942996	HG2_PB_SVrefine2PB10Xhap12_14344	TCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGCGCCACCATGCCCAGCTAATTTTGTATTTTTAGTAGAGAAGGGGTTTCTCCATGTTGAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8144:HG2_PB_PB10Xdip_19569:HG3_PB_pbsv_19284:HG3_Ill_250bpfermikitraw_24673:HG2_PB_pbsv_19608:HG2_Ill_250bpfermikitraw_25397:HG4_PB_pbsv_19540:HG4_PB_SVrefine2PBcRDovetail_9860:HG4_PB_SVrefine2Falcon1Dovetail_12207:HG3_PB_SVrefine2PBcRDovetail_9659:HG3_PB_SVrefine2Falcon1Dovetail_12199:HG3_Ill_SVrefine2DISCOVARDovetail_13703:HG2_PB_SVrefine2PBcRplusDovetail_7083:HG2_PB_SVrefine2PB10Xhap12_14344:HG2_PB_SVrefine2Falcon2Bionano_9724:HG2_PB_SVrefine2Falcon1plusDovetail_7639;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8144:HG4_PB_SVrefine2PBcRDovetail_9860:HG4_PB_SVrefine2Falcon1Dovetail_12207:HG3_PB_SVrefine2PBcRDovetail_9659:HG3_PB_SVrefine2Falcon1Dovetail_12199:HG3_Ill_SVrefine2DISCOVARDovetail_13703:HG2_PB_SVrefine2PBcRplusDovetail_7083:HG2_PB_SVrefine2PB10Xhap12_14344:HG2_PB_SVrefine2Falcon2Bionano_9724:HG2_PB_SVrefine2Falcon1plusDovetail_7639;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0153846;ClusterMaxSizeDiff=0.0152672;ClusterMaxEditDist=0.0458015;PBcalls=12;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-131;DistBack=16621;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=308;REFWIDENED=22:42942997-42943435;PctSeqSimilarity=0.9691;PctSizeSimilarity=0.9847;PctRecOverlap=0.6439;SizeDiff=2;StartDistance=-47;EndDistance=-45;GTMatch=0;TruScore=86;MatchId=2412.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:50:1/1:3:29:1:6:0/0:11:0:14:0:0/0:29:0:./.:.:.:.:.:.
chr22	43101325	HG2_PB_SVrefine2Falcon1plusDovetail_7640	AGCCGGGCGCAATGGCTCATGCCTGTAATCTCAGCACTTTGGGGGCCCGAGGTGGGTGGATCACTTGAGGTCGGGAGTTCGAGACCAGCCTGGCCAATAAGGGCGAAACCCTCTCTCTACTGAAAATACAAAAAATTAGCTGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACTTGGGAGGCCAAGGCAGGAGAATCATTTGAACCCAGGAGGTAGAGGCTGTGGTGAGCTGAGATCGTACCACTGCACTCCAGCCTGGGCGACAGAGATTCTGTCTCAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAGAAAATACTGGCACAAGACAAATACAAATTCGAATCCAAAATTACAGCATGAATTTAAAAATAAAAACACTTTAAAAAGTAATTCCAGGCCAGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTAATAGGCCGAGGCTGGCAGATCGTTTGAGGTCTGGAGTTGGAGACCAGCCTGCCCAACAAGGTGAAACCCCATCTCCATTAAAAATACAAAAATTACAGCCCGACCAATATGGTGAAACCCTGTATCTACTAAAAATACGAAAATTAGCCAGGCGTGGTAATGTGTGCCTGTCATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAAGTGGAGGTTGCAATGAGTCAAGATCGCACCACTGCACTCCAGCCTGGGTGACACAGACTACATCTCAAAAAAAAAAAAAAAAAAAAAGTTG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13614:HG3_10X_allpass_3626:HG4_10X_allpass_3463:HG2_10X_allpass_2946:HG4_PB_pbsv_19542:HG4_Ill_MetaSV_3222:HG4_Ill_GATKHCSBGrefine_13116:HG3_Ill_GATKHCSBGrefine_12514:HG2_PB_pbsv_19610:HG2_Ill_GATKHCSBGrefine_12677:HG3_PB_pbsv_19285:HG2_Ill_tnscope_2018:HG2_Ill_MetaSV_3110:HG3_Ill_MetaSV_3264:HG4_PB_SVrefine2PBcRDovetail_9861:HG4_PB_SVrefine2Falcon1Dovetail_12209:HG4_Ill_SVrefine2DISCOVARDovetail_13487:HG3_PB_SVrefine2Falcon1Dovetail_12200:HG3_Ill_SVrefine2DISCOVARDovetail_13704:HG2_PB_SVrefine2PBcRplusDovetail_7085:HG2_PB_SVrefine2PB10Xhap12_14345:HG2_PB_SVrefine2Falcon2Bionano_9726:HG2_PB_SVrefine2Falcon1plusDovetail_7640:HG2_Ill_SVrefine2DISCOVARplusDovetail_8146;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13614:HG4_PB_SVrefine2PBcRDovetail_9861:HG4_PB_SVrefine2Falcon1Dovetail_12209:HG4_Ill_SVrefine2DISCOVARDovetail_13487:HG3_PB_SVrefine2Falcon1Dovetail_12200:HG3_Ill_SVrefine2DISCOVARDovetail_13704:HG2_PB_SVrefine2PBcRplusDovetail_7085:HG2_PB_SVrefine2PB10Xhap12_14345:HG2_PB_SVrefine2Falcon2Bionano_9726:HG2_PB_SVrefine2Falcon1plusDovetail_7640:HG2_Ill_SVrefine2DISCOVARplusDovetail_8146;NumExactMatchSVs=11;ClusterMaxShiftDist=0.322257;ClusterMaxSizeDiff=0.322257;ClusterMaxEditDist=0.322257;PBcalls=10;Illcalls=10;TenXcalls=4;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-755;DistBack=23488;DistForward=-458;DistMin=-458;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=300;REFWIDENED=22:43101326-43102380;PctSeqSimilarity=0.9087;PctSizeSimilarity=0.996;PctRecOverlap=0.8399;SizeDiff=3;StartDistance=-121;EndDistance=-118;GTMatch=0;TruScore=91;MatchId=2414.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:1/1:3:46:1/1:0:14:2:16:./.:10:2:8:9:0/1:24:7:0/1:20:21:.:.:.
chr22	43292348	HG2_Ill_Krunchall_25702	GTCACTCTTTCTTACTGCTAAGTAGTATTCGATTGTGTAGTTATGCCACTATCAGAAGT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13617:HG3_PB_HySA_29163:HG2_PB_pbsv_19612:HG2_PB_PB10Xdip_19570:HG3_PB_pbsv_19287:HG2_PB_HySA_35346:HG3_Ill_svaba_24060:HG3_Ill_manta_4179:HG3_Ill_Krunchall_25224:HG3_Ill_GATKHC_30512:HG3_Ill_GATKHCSBGrefine_12515:HG3_Ill_250bpfermikitraw_24677:HG3_Ill_150bpfermikitraw_23926:HG2_Ill_svaba_23815:HG2_Ill_manta_5153:HG2_Ill_SpiralSDKrefine_10564:HG2_Ill_Krunchall_25702:HG2_Ill_GATKHC_30589:HG2_Ill_GATKHCSBGrefine_12678:HG2_Ill_250bpfermikitraw_25404:HG2_Ill_150bpfermikitraw_23865:HG2_Ill_Spiral_1235:HG3_PB_SVrefine2PBcRDovetail_9661:HG3_Ill_SVrefine2DISCOVARDovetail_13705:HG2_PB_SVrefine2PBcRplusDovetail_7086:HG2_PB_SVrefine2PB10Xhap12_14346:HG2_PB_SVrefine2Falcon2Bionano_9728:HG2_Ill_SVrefine2DISCOVARplusDovetail_8147;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23865:HG2_Ill_250bpfermikitraw_25404:HG2_Ill_GATKHCSBGrefine_12678:HG2_Ill_GATKHC_30589:HG2_Ill_Krunchall_25702:HG2_Ill_SpiralSDKrefine_10564:HG2_Ill_manta_5153:HG2_Ill_svaba_23815:HG3_Ill_150bpfermikitraw_23926:HG3_Ill_250bpfermikitraw_24677:HG3_Ill_GATKHCSBGrefine_12515:HG3_Ill_GATKHC_30512:HG3_Ill_Krunchall_25224:HG3_Ill_manta_4179:HG3_Ill_svaba_24060;NumExactMatchSVs=15;ClusterMaxShiftDist=0.101695;ClusterMaxSizeDiff=0.101695;ClusterMaxEditDist=0.155172;PBcalls=9;Illcalls=18;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=15;TenXexactcalls=0;CGexactcalls=0;HG2count=17;HG3count=11;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-58;DistBack=6943;DistForward=-9;DistMin=-9;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=115;REFWIDENED=22:43292341-43292513;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2415.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:24:0|1:28:0:5:24:1|0:0:10:13:1:0/1:30:14:./.:.:.:.:.:.
chr22	43549325	HG3_Ill_manta_4180	TGGCTTATTTGTGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCTGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_9731:HG2_PB_SVrefine2Falcon1plusDovetail_7644:HG3_PB_SVrefine2PBcRDovetail_9664:HG2_10X_SVrefine210Xhap12_13619:HG4_PB_assemblyticsfalcon_16496:HG4_PB_SVrefine2Falcon1Dovetail_12212:HG2_Ill_Spiral_1236:HG4_PB_pbsv_19545:HG3_PB_pbsv_19291:HG2_PB_pbsv_19616:HG2_Ill_breakscan11_2803:HG2_Ill_MetaSV_3112:HG4_Ill_scalpel_17543:HG4_Ill_manta_4363:HG4_Ill_MetaSV_3223:HG4_Ill_GATKHCSBGrefine_13119:HG4_10X_allpass_3464:HG3_Ill_manta_4180:HG3_Ill_GATKHCSBGrefine_12518:HG3_10X_allpass_3627:HG2_Ill_manta_5155:HG2_Ill_GATKHCSBGrefine_12682:HG2_Ill_tnscope_2019:HG4_PB_SVrefine2PBcRDovetail_9864:HG3_PB_SVrefine2Falcon1Dovetail_12203:HG3_Ill_SVrefine2DISCOVARDovetail_13708:HG2_PB_SVrefine2PBcRplusDovetail_7090:HG2_PB_SVrefine2PB10Xhap12_14351;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12682:HG2_Ill_manta_5155:HG3_10X_allpass_3627:HG3_Ill_GATKHCSBGrefine_12518:HG3_Ill_manta_4180:HG4_10X_allpass_3464:HG4_Ill_GATKHCSBGrefine_13119:HG4_Ill_MetaSV_3223:HG4_Ill_manta_4363:HG4_Ill_scalpel_17543;NumExactMatchSVs=10;ClusterMaxShiftDist=0.175824;ClusterMaxSizeDiff=0.175824;ClusterMaxEditDist=0.200734;PBcalls=12;Illcalls=13;TenXcalls=3;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=2;CGexactcalls=0;HG2count=12;HG3count=7;HG4count=9;NumTechs=3;NumTechsExact=2;SVLEN=-327;DistBack=-568;DistForward=-309;DistMin=-568;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=78;REFWIDENED=22:43549268-43549672;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2416.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:53:1/1:2:19:0:25:1/1:0:20:0:18:1/1:0:39:0/1:3:8:.:.:.
chr22	43910984	HG2_Ill_SpiralSDKrefine_10575	CCCAGTTCCTACTGCAGTCTGTGCCTGGCACACAGAGCCGAGGCTGGAGTGTGCAGAGGGGAGTAGATGGGGCCACTCTGGAAGGTCTCAGTGAGGGGCTCCCACTGACCCTGTGGGCA	GC	20	PASS	ClusterIDs=HG4_PB_pbsv_19555:HG4_Ill_GATKHCSBGrefine_13122:HG2_Ill_GATKHC_30603:HG2_Ill_GATKHCSBGrefine_12687:HG4_Ill_Krunchall_26021:HG4_Ill_svaba_23722:HG2_Ill_svaba_23831:HG4_PB_SVrefine2PBcRDovetail_9867:HG4_Ill_manta_4364:HG4_Ill_SVrefine2DISCOVARDovetail_13495:HG4_Ill_Cortex_2245:HG2_PB_assemblyticsPBcR_16338:HG2_PB_SVrefine2PBcRplusDovetail_7095:HG2_PB_SVrefine2Falcon2Bionano_9736:HG2_Ill_SpiralSDKrefine_10575:HG2_Ill_SVrefine2DISCOVARplusDovetail_8154:HG2_Ill_Cortex_5308:HG2_10X_SVrefine210Xhap12_13624:HG4_PB_HySA_28118:HG4_Ill_MetaSV_3226:HG2_Ill_MetaSV_3114:HG2_Ill_Spiral_1237:HG2_PB_pbsv_19625;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13624:HG2_Ill_Cortex_5308:HG2_Ill_SVrefine2DISCOVARplusDovetail_8154:HG2_Ill_SpiralSDKrefine_10575:HG2_PB_SVrefine2Falcon2Bionano_9736:HG2_PB_SVrefine2PBcRplusDovetail_7095:HG2_PB_assemblyticsPBcR_16338:HG4_Ill_Cortex_2245:HG4_Ill_SVrefine2DISCOVARDovetail_13495:HG4_Ill_manta_4364:HG4_PB_SVrefine2PBcRDovetail_9867;NumExactMatchSVs=11;ClusterMaxShiftDist=0.133333;ClusterMaxSizeDiff=0.133333;ClusterMaxEditDist=0.133333;PBcalls=7;Illcalls=15;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=0;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-117;DistBack=-18;DistForward=-87;DistMin=-87;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=22:43910984-43911102;PctSeqSimilarity=0.9905;PctSizeSimilarity=0.9915;PctRecOverlap=0.9748;SizeDiff=1;StartDistance=1;EndDistance=3;GTMatch=0;TruScore=98;MatchId=2418.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:29:0|1:33:2:0:26:0|1:19:0:0:10:0/1:42:14:./.:.:.:.:2021:.
chr22	45057006	HG3_Ill_manta_4182	GGCGCTAAACCATTCATGAGGGATCCGCCCCCATGAGCCAATCCCCTCCCGCCAGCCCCCAGCTCCC	G	20	PASS	ClusterIDs=HG3_PB_HySA_29196:HG3_PB_assemblyticsfalcon_16797:HG2_PB_assemblyticsfalcon_16886:HG2_PB_pbsv_19641:HG4_PB_HySA_28133:HG4_PB_assemblyticsfalcon_16530:HG2_PB_assemblyticsPBcR_16360:HG3_Ill_Spiral_19566:HG2_Ill_Spiral_1239:HG3_PB_pbsv_19319:HG4_PB_pbsv_19571:HG4_Ill_svaba_23739:HG4_Ill_scalpel_17565:HG4_Ill_manta_4366:HG4_Ill_Krunchall_26039:HG4_Ill_GATKHC_30545:HG4_Ill_GATKHCSBGrefine_13129:HG4_Ill_250bpfermikitraw_25032:HG4_Ill_150bpfermikitraw_24051:HG3_Ill_svaba_24093:HG3_Ill_scalpel_18352:HG3_Ill_manta_4182:HG3_Ill_Krunchall_25254:HG3_Ill_GATKHC_30567:HG3_Ill_GATKHCSBGrefine_12531:HG3_Ill_250bpfermikitraw_24709:HG3_Ill_150bpfermikitraw_23957:HG3_10X_allpass_3630:HG2_Ill_svaba_23848:HG2_Ill_scalpel_17986:HG2_Ill_manta_5159:HG2_Ill_SpiralSDKrefine_10588:HG2_Ill_Krunchall_25732:HG2_Ill_GATKHC_30638:HG2_Ill_GATKHCSBGrefine_12695:HG2_Ill_250bpfermikitraw_25437:HG2_Ill_150bpfermikitraw_23892;NumClusterSVs=37;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23892:HG2_Ill_250bpfermikitraw_25437:HG2_Ill_GATKHCSBGrefine_12695:HG2_Ill_GATKHC_30638:HG2_Ill_Krunchall_25732:HG2_Ill_SpiralSDKrefine_10588:HG2_Ill_manta_5159:HG2_Ill_scalpel_17986:HG2_Ill_svaba_23848:HG3_10X_allpass_3630:HG3_Ill_150bpfermikitraw_23957:HG3_Ill_250bpfermikitraw_24709:HG3_Ill_GATKHCSBGrefine_12531:HG3_Ill_GATKHC_30567:HG3_Ill_Krunchall_25254:HG3_Ill_manta_4182:HG3_Ill_scalpel_18352:HG3_Ill_svaba_24093:HG4_Ill_150bpfermikitraw_24051:HG4_Ill_250bpfermikitraw_25032:HG4_Ill_GATKHCSBGrefine_13129:HG4_Ill_GATKHC_30545:HG4_Ill_Krunchall_26039:HG4_Ill_manta_4366:HG4_Ill_scalpel_17565:HG4_Ill_svaba_23739;NumExactMatchSVs=26;ClusterMaxShiftDist=0.0451128;ClusterMaxSizeDiff=0.0451128;ClusterMaxEditDist=0.0458015;PBcalls=9;Illcalls=27;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=25;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=13;HG4count=11;NumTechs=3;NumTechsExact=2;SVLEN=-66;DistBack=7829;DistForward=15197;DistMin=7829;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=71;REFWIDENED=22:45057007-45057143;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2419.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:6:52:1/1:2:28:3:24:1/1:0:6:0:11:1/1:0:39:./.:.:.:.:.:.
chr22	45280247	HG3_Ill_GATKHC_30570	GTCACCACCACCACCATCACGGTGATGAGCACCATCACCACCATCACCACCACCATGATCACCATTA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_16890:HG3_PB_HySA_29201:HG2_PB_HySA_35406:HG3_PB_pbsv_19321:HG2_PB_pbsv_19644:HG4_Ill_GATKHC_30551:HG3_Ill_svaba_24099:HG3_Ill_GATKHC_30570:HG3_Ill_GATKHCSBGrefine_12533:HG3_Ill_150bpfermikitraw_23962:HG2_PB_assemblyticsPBcR_16362:HG2_Ill_SpiralSDKrefine_10590:HG2_Ill_GATKHC_30643:HG2_Ill_150bpfermikitraw_23896:HG3_PB_assemblyticsfalcon_16802;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23896:HG2_Ill_GATKHC_30643:HG2_Ill_SpiralSDKrefine_10590:HG2_PB_assemblyticsPBcR_16362:HG3_Ill_150bpfermikitraw_23962:HG3_Ill_GATKHCSBGrefine_12533:HG3_Ill_GATKHC_30570:HG3_Ill_svaba_24099:HG4_Ill_GATKHC_30551;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.0606061;PBcalls=7;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=-36;DistForward=-3;DistMin=-36;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=64;REFWIDENED=22:45280246-45280378;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=1;TruScore=100;MatchId=2420.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:47:1/1:1:16:1:24:./.:29:65:52:14:./.:0:2:./.:.:.:.:.:.
chr22	45488361	HG3_Ill_Krunchall_25261	GGGAGAAGGGTCTTTCTAGAAGCAGAGGGGCAGCAGAATCTCTGGAGGGCTCCTCGCTCTATGA	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_1240:HG2_PB_pbsv_19650:HG3_PB_pbsv_19325:HG4_PB_assemblyticsfalcon_16544:HG3_PB_assemblyticsfalcon_16807:HG3_Ill_scalpel_18359:HG3_Ill_Krunchall_25261:HG3_Ill_GATKHCSBGrefine_12535:HG3_Ill_250bpfermikitraw_24716:HG3_Ill_150bpfermikitraw_23966:HG3_10X_allpass_3631:HG2_PB_SVrefine2PBcRplusDovetail_7109:HG2_Ill_manta_5161:HG2_Ill_SpiralSDKrefine_10593:HG2_Ill_Krunchall_25743:HG2_Ill_GATKHCSBGrefine_12703:HG2_Ill_250bpfermikitraw_25450:HG3_PB_HySA_29206:HG3_Ill_Spiral_19574;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25450:HG2_Ill_GATKHCSBGrefine_12703:HG2_Ill_Krunchall_25743:HG2_Ill_SpiralSDKrefine_10593:HG2_Ill_manta_5161:HG2_PB_SVrefine2PBcRplusDovetail_7109:HG3_10X_allpass_3631:HG3_Ill_150bpfermikitraw_23966:HG3_Ill_250bpfermikitraw_24716:HG3_Ill_GATKHCSBGrefine_12535:HG3_Ill_Krunchall_25261:HG3_Ill_scalpel_18359:HG3_PB_assemblyticsfalcon_16807:HG4_PB_assemblyticsfalcon_16544;NumExactMatchSVs=14;ClusterMaxShiftDist=0.03125;ClusterMaxSizeDiff=0.03125;ClusterMaxEditDist=0.031746;PBcalls=6;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=10;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-63;DistBack=12029;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=72;REFWIDENED=22:45488362-45488496;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2421.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:28:./.:8:20:17:7:1|0:0:8:18:0:0/1:19:17:./.:.:.:.:.:.
chr22	45875020	HG4_Ill_SVrefine2DISCOVARDovetail_13510	TTATTATAAATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCTCCCGGCC	T	20	PASS	ClusterIDs=HG4_PB_HySA_28147:HG2_PB_assemblyticsfalcon_16899:HG2_PB_SVrefine2PBcRplusDovetail_7113:HG2_PB_assemblyticsPBcR_16373:HG4_PB_assemblyticsfalcon_16549:HG3_PB_assemblyticsfalcon_16815:HG4_PB_pbsv_19585:HG4_PB_SVrefine2PBcRDovetail_9881:HG4_PB_SVrefine2Falcon1Dovetail_12236:HG4_Ill_SVrefine2DISCOVARDovetail_13510:HG4_Ill_GATKHCSBGrefine_13137:HG4_10X_allpass_3468:HG3_PB_SVrefine2Falcon1Dovetail_12226:HG2_PB_pbsv_19655:HG2_PB_SVrefine2Falcon1plusDovetail_7668:HG2_Ill_SVrefine2DISCOVARplusDovetail_8171:HG2_Ill_GATKHCSBGrefine_12707:HG2_10X_allpass_2950:HG2_10X_SVrefine210Xhap12_13636:HG2_Ill_tnscope_2022:HG4_Ill_manta_4369:HG2_Ill_manta_5163:HG2_Ill_MetaSV_3121:HG4_Ill_MetaSV_3235;NumClusterSVs=24;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13636:HG2_10X_allpass_2950:HG2_Ill_GATKHCSBGrefine_12707:HG2_Ill_SVrefine2DISCOVARplusDovetail_8171:HG2_PB_SVrefine2Falcon1plusDovetail_7668:HG2_PB_pbsv_19655:HG3_PB_SVrefine2Falcon1Dovetail_12226:HG4_10X_allpass_3468:HG4_Ill_GATKHCSBGrefine_13137:HG4_Ill_SVrefine2DISCOVARDovetail_13510:HG4_PB_SVrefine2Falcon1Dovetail_12236:HG4_PB_SVrefine2PBcRDovetail_9881;NumExactMatchSVs=12;ClusterMaxShiftDist=0.101227;ClusterMaxSizeDiff=0.101227;ClusterMaxEditDist=0.101227;PBcalls=12;Illcalls=9;TenXcalls=3;CGcalls=0;PBexactcalls=5;Illexactcalls=4;TenXexactcalls=3;CGexactcalls=0;HG2count=12;HG3count=2;HG4count=10;NumTechs=3;NumTechsExact=3;SVLEN=-330;DistBack=-235;DistForward=-294;DistMin=-294;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=14;REFWIDENED=22:45875021-45875364;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2422.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:25:0|1:25:2:5:20:./.:25:0:1:15:0/1:27:17:0/1:15:4:.:.:.
chr22	45983114	HG4_Ill_SVrefine2DISCOVARDovetail_13513	AAGCCCCACTTTTCACATCCATCCCCGCTGCCCGGCCAGAGAGACGTCCTCAGCCCAGAGCCCCACTTTTCACATCCATCCCCGCTGCCCGGCCAGAGACACGTCCTCAGCCCAG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_19587:HG2_Ill_SpiralSDKrefine_10599:HG2_PB_pbsv_19657:HG3_PB_pbsv_19333:HG4_PB_SVrefine2PBcRDovetail_9883:HG4_PB_SVrefine2Falcon1Dovetail_12238:HG4_Ill_SVrefine2DISCOVARDovetail_13513:HG2_PB_SVrefine2PBcRplusDovetail_7115:HG2_PB_SVrefine2PB10Xhap12_14381:HG2_PB_SVrefine2Falcon2Bionano_9754:HG2_PB_SVrefine2Falcon1plusDovetail_7670:HG2_Ill_SVrefine2DISCOVARplusDovetail_8174;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8174:HG2_PB_SVrefine2Falcon1plusDovetail_7670:HG2_PB_SVrefine2Falcon2Bionano_9754:HG2_PB_SVrefine2PB10Xhap12_14381:HG2_PB_SVrefine2PBcRplusDovetail_7115:HG4_Ill_SVrefine2DISCOVARDovetail_13513:HG4_PB_SVrefine2Falcon1Dovetail_12238:HG4_PB_SVrefine2PBcRDovetail_9883;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00877193;ClusterMaxSizeDiff=0.00873362;ClusterMaxEditDist=0.0175439;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-114;DistBack=18430;DistForward=-55;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=117;REFWIDENED=22:45983115-45983345;PctSeqSimilarity=0.9946;PctSizeSimilarity=1;PctRecOverlap=0.6348;SizeDiff=0;StartDistance=-42;EndDistance=-42;GTMatch=0;TruScore=87;MatchId=2423.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:35:0|1:21:3:2:32:./.:15:2:2:2:0/1:14:13:./.:.:.:.:.:.
chr22	46363334	HG3_Ill_GATKHC_30583	GGCTCCCACTGCATGTGGCCCCTTCCAATTGGGAAGTCCTCCAGAATGCACT	G	20	PASS	ClusterIDs=HG2_Ill_Spiral_1241:HG2_PB_HySA_35435:HG3_PB_pbsv_19336:HG3_Ill_svaba_24115:HG3_Ill_manta_4185:HG3_Ill_Krunchall_25271:HG3_Ill_GATKHC_30583:HG3_Ill_GATKHCSBGrefine_12538:HG3_Ill_250bpfermikitraw_24728:HG2_PB_pbsv_19659:HG2_PB_assemblyticsfalcon_16909:HG2_Ill_svaba_23872:HG2_Ill_manta_5165:HG2_Ill_SpiralSDKrefine_10605:HG2_Ill_Krunchall_25753:HG2_Ill_GATKHC_30658:HG2_Ill_GATKHCSBGrefine_12712:HG2_Ill_250bpfermikitraw_25461:HG2_Ill_150bpfermikitraw_23911:HG2_10X_allpass_2953:HG2_PB_assemblyticsPBcR_16380:HG3_Ill_Spiral_19582;NumClusterSVs=22;ExactMatchIDs=HG2_10X_allpass_2953:HG2_Ill_150bpfermikitraw_23911:HG2_Ill_250bpfermikitraw_25461:HG2_Ill_GATKHCSBGrefine_12712:HG2_Ill_GATKHC_30658:HG2_Ill_Krunchall_25753:HG2_Ill_SpiralSDKrefine_10605:HG2_Ill_manta_5165:HG2_Ill_svaba_23872:HG2_PB_assemblyticsfalcon_16909:HG2_PB_pbsv_19659:HG3_Ill_250bpfermikitraw_24728:HG3_Ill_GATKHCSBGrefine_12538:HG3_Ill_GATKHC_30583:HG3_Ill_Krunchall_25271:HG3_Ill_manta_4185:HG3_Ill_svaba_24115:HG3_PB_pbsv_19336;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.0582524;PBcalls=5;Illcalls=16;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=14;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=8;HG4count=0;NumTechs=3;NumTechsExact=3;SVLEN=-51;DistBack=14201;DistForward=15317;DistMin=14201;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=22:46363333-46363387;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2424.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:26:0|1:20:2:2:24:1|0:0:15:21:1:0/1:26:19:./.:.:.:.:.:.
chr22	47083172	HG2_Ill_scalpel_18012	CTGGACAGGGGCTGCAGTAAACCCCACGTGTCCCTCACTCAAAGCTGGCCCTGAGCACCGCTCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13657:HG4_PB_pbsv_19608:HG2_PB_HySA_35469:HG2_PB_assemblyticsfalcon_16933:HG4_Ill_svaba_23774:HG4_Ill_scalpel_17588:HG4_Ill_manta_4374:HG4_Ill_Krunchall_26070:HG4_Ill_GATKHC_30591:HG4_Ill_GATKHCSBGrefine_13146:HG4_Ill_250bpfermikitraw_25066:HG4_Ill_150bpfermikitraw_24085:HG2_PB_pbsv_19683:HG2_Ill_svaba_23888:HG2_Ill_scalpel_18012:HG2_Ill_manta_5168:HG2_Ill_breakscan11_2811:HG2_Ill_SpiralSDKrefine_10620:HG2_Ill_Krunchall_25770:HG2_Ill_GATKHC_30682:HG2_Ill_GATKHCSBGrefine_12721:HG2_Ill_250bpfermikitraw_25476:HG4_PB_SVrefine2PBcRDovetail_9894:HG4_PB_SVrefine2Falcon1Dovetail_12257:HG4_Ill_SVrefine2DISCOVARDovetail_13521:HG2_Ill_SVrefine2DISCOVARplusDovetail_8184;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25476:HG2_Ill_GATKHCSBGrefine_12721:HG2_Ill_GATKHC_30682:HG2_Ill_Krunchall_25770:HG2_Ill_SpiralSDKrefine_10620:HG2_Ill_breakscan11_2811:HG2_Ill_manta_5168:HG2_Ill_scalpel_18012:HG2_Ill_svaba_23888:HG2_PB_pbsv_19683:HG4_Ill_150bpfermikitraw_24085:HG4_Ill_250bpfermikitraw_25066:HG4_Ill_GATKHCSBGrefine_13146:HG4_Ill_GATKHC_30591:HG4_Ill_Krunchall_26070:HG4_Ill_manta_4374:HG4_Ill_scalpel_17588:HG4_Ill_svaba_23774;NumExactMatchSVs=18;ClusterMaxShiftDist=0.0472441;ClusterMaxSizeDiff=0.0472441;ClusterMaxEditDist=0.096;PBcalls=6;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=17;TenXexactcalls=0;CGexactcalls=0;HG2count=14;HG3count=0;HG4count=12;NumTechs=3;NumTechsExact=2;SVLEN=-63;DistBack=-46;DistForward=-50;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=64;REFWIDENED=22:47083126-47083252;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2425.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:27:0|1:27:3:1:24:0|1:16:1:0:13:0/1:36:36:./.:.:.:.:.:.
chr22	47459828	HG3_Ill_scalpel_18381	GCCCCCCTACTCCAGTGTGGCCTCCTCTGAACTGCATCTTCAGGTGCCCTGTTTTCCTCTTCTGTGAGGACACCCGTCATTGGATCAGGGC	G	20	PASS	ClusterIDs=HG2_PB_pbsv_19688:HG3_PB_assemblyticsfalcon_16853:HG3_PB_pbsv_19364:HG3_PB_SVrefine2PBcRDovetail_9704:HG3_PB_SVrefine2Falcon1Dovetail_12251:HG3_Ill_SVrefine2DISCOVARDovetail_13742:HG2_Ill_SVrefine2DISCOVARplusDovetail_8185:HG2_10X_SVrefine210Xhap12_13659:HG2_Ill_SpiralSDKrefine_10626:HG3_Ill_Spiral_19601:HG3_Ill_GATKHC_30614:HG3_Ill_GATKHCSBGrefine_12541:HG2_Ill_GATKHC_30688:HG2_Ill_GATKHCSBGrefine_12723:HG3_Ill_manta_4187:HG2_Ill_manta_5169:HG3_Ill_svaba_24138:HG3_Ill_scalpel_18381:HG3_Ill_Krunchall_25289:HG3_Ill_250bpfermikitraw_24747:HG2_Ill_svaba_23892:HG2_Ill_scalpel_18017:HG2_Ill_Krunchall_25774:HG2_Ill_250bpfermikitraw_25480:HG2_Ill_150bpfermikitraw_23929:HG3_PB_HySA_29260;NumClusterSVs=26;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23929:HG2_Ill_250bpfermikitraw_25480:HG2_Ill_Krunchall_25774:HG2_Ill_scalpel_18017:HG2_Ill_svaba_23892:HG3_Ill_250bpfermikitraw_24747:HG3_Ill_Krunchall_25289:HG3_Ill_scalpel_18381:HG3_Ill_svaba_24138;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0552486;ClusterMaxSizeDiff=0.0552486;ClusterMaxEditDist=0.0903955;PBcalls=6;Illcalls=19;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=14;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-90;DistBack=2763;DistForward=1588;DistMin=1588;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=94;REFWIDENED=22:47459789-47459972;PctSeqSimilarity=0.9942;PctSizeSimilarity=0.9889;PctRecOverlap=0.6044;SizeDiff=1;StartDistance=-36;EndDistance=-35;GTMatch=0;TruScore=86;MatchId=2427.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:19:0|1:23:2:1:17:1|0:0:12:31:1:0/1:19:13:./.:.:.:.:.:.
chr22	47558258	HG4_Ill_Krunchall_26075	GTGGGACTGTGGACCCGGTGCAGGGAGAGTCGTGGGAATGGGACTGCGGACCCGGTGCAGGGAGAGTCGTGGGAA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13662:HG2_PB_assemblyticsfalcon_16946:HG4_PB_pbsv_19615:HG4_Ill_Krunchall_26075:HG4_Ill_GATKHC_30597:HG4_Ill_250bpfermikitraw_25071:HG3_PB_pbsv_19369:HG3_Ill_GATKHC_30623:HG3_Ill_150bpfermikitraw_23999:HG2_PB_pbsv_19692:HG2_PB_assemblyticsPBcR_16404:HG2_Ill_SpiralSDKrefine_10629:HG2_Ill_GATKHC_30693:HG2_Ill_250bpfermikitraw_25484:HG3_PB_assemblyticsfalcon_16860;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25484:HG2_Ill_GATKHC_30693:HG2_Ill_SpiralSDKrefine_10629:HG2_PB_assemblyticsPBcR_16404:HG2_PB_pbsv_19692:HG3_Ill_150bpfermikitraw_23999:HG3_Ill_GATKHC_30623:HG3_PB_pbsv_19369:HG4_Ill_250bpfermikitraw_25071:HG4_Ill_GATKHC_30597:HG4_Ill_Krunchall_26075:HG4_PB_pbsv_19615;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0133333;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.186667;PBcalls=6;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-74;DistBack=2699;DistForward=-66;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=8;REFWIDENED=22:47558257-47558341;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:30:0|1:22:3:3:26:0|1:12:1:0:16:0/1:20:11:./.:.:.:.:.:.
chr22	47616402	HG2_PB_assemblyticsPBcR_16412	TGTACATATGGGCATGCACACATACACATCCAGGTACACAGGCACACACATGCAAAACACCG	T	20	PASS	ClusterIDs=HG4_PB_HySA_28203:HG3_PB_assemblyticsfalcon_16868:HG4_PB_assemblyticsfalcon_16594:HG4_Ill_GATKHCSBGrefine_13153:HG4_Ill_250bpfermikitraw_25076:HG2_PB_assemblyticsfalcon_16955:HG2_PB_assemblyticsPBcR_16412:HG2_Ill_Krunchall_25780:HG2_Ill_GATKHCSBGrefine_12726:HG2_Ill_250bpfermikitraw_25490:HG4_PB_pbsv_19620:HG2_PB_pbsv_19696;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25490:HG2_Ill_GATKHCSBGrefine_12726:HG2_Ill_Krunchall_25780:HG2_PB_assemblyticsPBcR_16412:HG2_PB_assemblyticsfalcon_16955:HG4_Ill_250bpfermikitraw_25076:HG4_Ill_GATKHCSBGrefine_13153:HG4_PB_assemblyticsfalcon_16594;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0327869;ClusterMaxEditDist=0.0666667;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-61;DistBack=7152;DistForward=-60;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=213;REFWIDENED=22:47616221-47616494;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2430.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:27:./.:14:4:10:18:0|1:31:2:1:13:0/1:19:13:./.:.:.:.:.:.
chr22	47696463	HG4_Ill_svaba_23788	GAGGAAGACCACAGCACGTGGAGGGGGACACCAAGCGGCTAGGACCCTGTGGACAGGGTGGCTGGGACAGCTGCCTCTAACTGGGCAGGGCCTGGCGTCCTCCACGGTGGACCTGCCACCTGCCCCAGCCCAGCCTCACCGGGGAAGGGGCCAGCCAACCCCAGCCCCTCTCTTGGGGGCCTCTGCTTTCTCTGGCTGGGTCCAGGGTCCTGTTGCCACCTTTGGCCAGAGCTCCCCTTCATGATGTCCCCTCATCTGGGCCACATGGAAGGAAGGACTGACCACCTGGTCCCATCCAGACCATGTTACTCACCTCTCTGTGCTTCAAGTCTTTCATCTGTAAAGGGAGACCCACAGGTCCTTCCTCAGTGGCGCTGGGAGGCCGATGAGTTAATCA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_19698:HG2_10X_allpass_2957:HG3_PB_assemblyticsfalcon_16870:HG4_PB_assemblyticsfalcon_16596:HG4_Ill_Krunchall_26081:HG3_Ill_Krunchall_25297:HG2_Ill_Krunchall_25782:HG3_PB_HySA_29272:HG4_Ill_MetaSV_3240:HG3_Ill_MetaSV_3279:HG2_Ill_tnscope_2024:HG2_Ill_MetaSV_3124:HG4_PB_pbsv_19622:HG4_PB_SVrefine2PBcRDovetail_9902:HG4_PB_SVrefine2Falcon1Dovetail_12266:HG4_Ill_svaba_23788:HG4_Ill_manta_4377:HG4_Ill_SVrefine2DISCOVARDovetail_13526:HG4_Ill_GATKHCSBGrefine_13155:HG4_Ill_Cortex_2257:HG4_10X_allpass_3472:HG3_PB_pbsv_19371:HG3_PB_SVrefine2PBcRDovetail_9711:HG3_PB_SVrefine2Falcon1Dovetail_12255:HG3_Ill_svaba_24149:HG3_Ill_manta_4190:HG3_Ill_GATKHCSBGrefine_12550:HG3_Ill_Cortex_2288:HG3_10X_allpass_3638:HG2_PB_SVrefine2PB10Xhap12_14409:HG2_PB_SVrefine2Falcon2Bionano_9776:HG2_PB_SVrefine2Falcon1plusDovetail_7699:HG2_Ill_svaba_23901:HG2_Ill_manta_5171:HG2_Ill_breakscan11_2814:HG2_Ill_SpiralSDKrefine_10632:HG2_Ill_GATKHCSBGrefine_12728:HG2_Ill_Cortex_5329:HG2_10X_SVrefine210Xhap12_13664:HG2_PB_assemblyticsfalcon_16956;NumClusterSVs=40;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13664:HG2_Ill_Cortex_5329:HG2_Ill_GATKHCSBGrefine_12728:HG2_Ill_SpiralSDKrefine_10632:HG2_Ill_breakscan11_2814:HG2_Ill_manta_5171:HG2_Ill_svaba_23901:HG2_PB_SVrefine2Falcon1plusDovetail_7699:HG2_PB_SVrefine2Falcon2Bionano_9776:HG2_PB_SVrefine2PB10Xhap12_14409:HG3_10X_allpass_3638:HG3_Ill_Cortex_2288:HG3_Ill_GATKHCSBGrefine_12550:HG3_Ill_manta_4190:HG3_Ill_svaba_24149:HG3_PB_SVrefine2Falcon1Dovetail_12255:HG3_PB_SVrefine2PBcRDovetail_9711:HG3_PB_pbsv_19371:HG4_10X_allpass_3472:HG4_Ill_Cortex_2257:HG4_Ill_GATKHCSBGrefine_13155:HG4_Ill_SVrefine2DISCOVARDovetail_13526:HG4_Ill_manta_4377:HG4_Ill_svaba_23788:HG4_PB_SVrefine2Falcon1Dovetail_12266:HG4_PB_SVrefine2PBcRDovetail_9902:HG4_PB_pbsv_19622;NumExactMatchSVs=27;ClusterMaxShiftDist=0.0306122;ClusterMaxSizeDiff=0.0306122;ClusterMaxEditDist=0.0306122;PBcalls=14;Illcalls=22;TenXcalls=4;CGcalls=0;PBexactcalls=9;Illexactcalls=15;TenXexactcalls=3;CGexactcalls=0;HG2count=16;HG3count=12;HG4count=12;NumTechs=3;NumTechsExact=3;SVLEN=-396;DistBack=-397;DistForward=-392;DistMin=-397;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=22:47696464-47696865;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2431.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:47:0|1:34:0:1:35:1|0:0:17:33:0:0/1:58:15:0/1:38:14:.:.:.
chr22	48716117	HG4_Ill_GATKHC_30627	ACACAGCACAGCACAGCACAGCACAGTACAACACAGCTCAACACAACACAACACAGCACAG	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8198:HG4_PB_assemblyticsfalcon_16614:HG3_PB_assemblyticsfalcon_16891:HG2_PB_HySA_35507:HG2_PB_pbsv_19713:HG4_PB_pbsv_19640:HG2_PB_assemblyticsfalcon_16973:HG4_Ill_scalpel_17606:HG4_Ill_Krunchall_26096:HG4_Ill_GATKHC_30627:HG4_Ill_250bpfermikitraw_25091:HG3_Ill_scalpel_18405:HG3_Ill_Krunchall_25311:HG3_Ill_250bpfermikitraw_24772:HG2_Ill_scalpel_18033:HG2_Ill_SpiralSDKrefine_10645:HG2_Ill_GATKHC_30714:HG2_Ill_GATKHCSBGrefine_12737:HG2_Ill_250bpfermikitraw_25501:HG2_Ill_150bpfermikitraw_23946:HG4_Ill_SVrefine2DISCOVARDovetail_13537:HG4_PB_HySA_28223:HG4_Ill_Krunchall_26095:HG4_Ill_GATKHCSBGrefine_13168:HG4_Ill_250bpfermikitraw_25090:HG3_Ill_SVrefine2DISCOVARDovetail_13757:HG2_PB_SVrefine2PBcRplusDovetail_7148:HG2_PB_SVrefine2PB10Xhap12_14423:HG2_PB_SVrefine2Falcon2Bionano_9785;NumClusterSVs=29;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23946:HG2_Ill_250bpfermikitraw_25501:HG2_Ill_GATKHCSBGrefine_12737:HG2_Ill_GATKHC_30714:HG2_Ill_SpiralSDKrefine_10645:HG2_Ill_scalpel_18033:HG3_Ill_250bpfermikitraw_24772:HG3_Ill_Krunchall_25311:HG3_Ill_scalpel_18405:HG4_Ill_250bpfermikitraw_25091:HG4_Ill_GATKHC_30627:HG4_Ill_Krunchall_26096:HG4_Ill_scalpel_17606;NumExactMatchSVs=13;ClusterMaxShiftDist=0.220183;ClusterMaxSizeDiff=0.218182;ClusterMaxEditDist=0.254545;PBcalls=10;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=13;TenXexactcalls=0;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=11;NumTechs=2;NumTechsExact=1;SVLEN=-60;DistBack=4536;DistForward=-56;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=118;REFWIDENED=22:48716073-48716250;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2433.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:11:45:1/1:3:10:1:11:./.:0:11:1:4:1/1:0:37:./.:.:.:.:.:.
chr22	49300812	HG2_Ill_250bpfermikitraw_25525	ATGGCACATGAGACCCGCATCCCTCTCACCCTCTCCGTTCCCCTGATGTGGGCACCTCCCATGGCATGGCACATGAGACCCGCATCCCTCTCACCCTCTCGGTTCCCCTGATGTGGGCATCTCCCATGGTG	A	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12283:HG2_PB_HySA_35541:HG4_Ill_GATKHCSBGrefine_13179:HG4_Ill_250bpfermikitraw_25108:HG3_Ill_GATKHCSBGrefine_12584:HG3_Ill_250bpfermikitraw_24798:HG2_Ill_GATKHC_30737:HG2_Ill_GATKHCSBGrefine_12748:HG2_Ill_250bpfermikitraw_25525:HG2_Ill_150bpfermikitraw_23966:HG3_PB_pbsv_19416:HG2_PB_pbsv_19733:HG4_PB_pbsv_19662:HG4_PB_SVrefine2PBcRDovetail_9917:HG4_PB_SVrefine2Falcon1Dovetail_12294:HG2_PB_SVrefine2PBcRplusDovetail_7160:HG2_PB_SVrefine2PB10Xhap12_14439:HG2_PB_SVrefine2Falcon2Bionano_9798:HG2_PB_SVrefine2Falcon1plusDovetail_7722:HG2_10X_SVrefine210Xhap12_13691;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_23966:HG2_Ill_250bpfermikitraw_25525:HG2_Ill_GATKHCSBGrefine_12748:HG2_Ill_GATKHC_30737:HG3_Ill_250bpfermikitraw_24798:HG3_Ill_GATKHCSBGrefine_12584:HG4_Ill_250bpfermikitraw_25108:HG4_Ill_GATKHCSBGrefine_13179;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0152672;ClusterMaxSizeDiff=0.0152672;ClusterMaxEditDist=0.129278;PBcalls=11;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=1;SVLEN=-130;DistBack=41;DistForward=-127;DistMin=-127;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=254;REFWIDENED=22:49300695-49301078;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2434.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:0:62:1/1:0:19:0:26:1/1:0:6:0:7:1/1:0:34:./.:.:.:.:.:.
chr22	49544116	HG4_PB_SVrefine2PBcRDovetail_9923	CCTTCCCCACAGAGAACCCCACACCACCAGAGAGACCAGTGCAGATGGAGGGAGACCCAGTAGAGAGACCTTCCCCACAGAGAACCCCACACCACCTAAGAGACTAATGCAGGCAGAATGAGATCCAGTGGAGAA	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8210:HG4_PB_pbsv_19672:HG2_PB_pbsv_19742:HG4_10X_allpass_3475:HG4_PB_HySA_28257:HG4_PB_SVrefine2PBcRDovetail_9923:HG4_PB_SVrefine2Falcon1Dovetail_12303;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8210:HG4_PB_SVrefine2PBcRDovetail_9923:HG4_PB_SVrefine2Falcon1Dovetail_12303;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0149254;ClusterMaxSizeDiff=0.0149254;ClusterMaxEditDist=0.0746269;PBcalls=5;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-134;DistBack=10192;DistForward=-47;DistMin=-47;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=534;REFWIDENED=22:49544117-49544784;PctSeqSimilarity=0.9492;PctSizeSimilarity=0.9925;PctRecOverlap=0.3481;SizeDiff=1;StartDistance=-88;EndDistance=-87;GTMatch=0;TruScore=76;MatchId=2436.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:12:0|1:26:1:1:11:0/0:35:1:33:1:0/0:36:0:./.:.:.:.:.:.
chr22	49962146	HG2_Ill_svaba_23990	TCCCCTTAACCCTGTCCCAGGCCCAGGGCCAACTCCCAGTGGACAGGAGAGTTCTGGGCCCTGTGTC	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_25561:HG2_PB_assemblyticsfalcon_17039:HG2_PB_pbsv_19766:HG3_PB_pbsv_19439:HG2_PB_PB10Xdip_19746:HG3_Ill_svaba_24237:HG3_Ill_Krunchall_25359:HG3_Ill_GATKHC_30711:HG3_Ill_GATKHCSBGrefine_12596:HG3_Ill_250bpfermikitraw_24825:HG3_Ill_150bpfermikitraw_24071:HG2_PB_assemblyticsPBcR_16480:HG2_Ill_svaba_23990:HG2_Ill_SpiralSDKrefine_10685:HG2_Ill_Krunchall_25848:HG2_Ill_GATKHC_30776:HG2_Ill_GATKHCSBGrefine_12759;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25561:HG3_Ill_svaba_24237:HG3_Ill_Krunchall_25359:HG3_Ill_GATKHC_30711:HG3_Ill_GATKHCSBGrefine_12596:HG3_Ill_250bpfermikitraw_24825:HG3_Ill_150bpfermikitraw_24071:HG2_PB_assemblyticsPBcR_16480:HG2_Ill_svaba_23990:HG2_Ill_SpiralSDKrefine_10685:HG2_Ill_Krunchall_25848:HG2_Ill_GATKHC_30776:HG2_Ill_GATKHCSBGrefine_12759;NumExactMatchSVs=13;ClusterMaxShiftDist=0.136364;ClusterMaxSizeDiff=0.135338;ClusterMaxEditDist=0.318182;PBcalls=5;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=7;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-66;DistBack=10399;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=200;REFWIDENED=22:49962091-49962356;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2438.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:33:./.:15:5:1:28:./.:0:12:14:1:0/1:21:23:./.:.:.:.:.:.
chr22	50061254	HG2_PB_SVrefine2PB10Xhap12_14463	ATCCTGACCACCCTGGGGCCCCCAGCCCAGCACGCGCAGGTGGGGGGAGGTCCTGACCATCCTGGGGCCCCCAGCTCAGCACATGCAGGTGGGAGGAGGTCCTGACCACCCTGGGGCCCCCAGCTCAGCACGCGCAGGTGGGGGGAGGTCCTGACCATCCTGGGGCCCCCAGCTCAGCACATGCAGGTGGGGGGAGGTCCTGACCACCCTGGGGCCCCCAGCCCAGCACGCGCAGGTGGGGGGAGGTCCTGACCATCCTGGGGCCCCCAGCTCAGCACATGCAGGTGGGGGGAGGTCCTGACCATCCTGGGGCCCCCAGCTCAGCACATGCAGGTGGGGGGAGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13718:HG2_PB_pbsv_19769:HG4_10X_allpass_3477:HG3_PB_HySA_29378:HG3_PB_pbsv_19442:HG2_PB_HySA_35603:HG4_PB_HySA_28281:HG3_PB_SVrefine2Falcon1Dovetail_12308:HG2_Ill_SVrefine2DISCOVARplusDovetail_8225:HG4_PB_pbsv_19696:HG4_PB_SVrefine2PBcRDovetail_9935:HG4_PB_SVrefine2Falcon1Dovetail_12320:HG4_Ill_SVrefine2DISCOVARDovetail_13564:HG3_PB_SVrefine2PBcRDovetail_9751:HG3_PB_SVrefine2Falcon1Dovetail_12307:HG3_Ill_SVrefine2DISCOVARDovetail_13787:HG2_PB_SVrefine2PBcRplusDovetail_7179:HG2_PB_SVrefine2PB10Xhap12_14463:HG2_PB_SVrefine2Falcon2Bionano_9818:HG2_PB_SVrefine2Falcon1plusDovetail_7745:HG2_Ill_SVrefine2DISCOVARplusDovetail_8224;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13718:HG4_PB_SVrefine2PBcRDovetail_9935:HG4_PB_SVrefine2Falcon1Dovetail_12320:HG4_Ill_SVrefine2DISCOVARDovetail_13564:HG3_PB_SVrefine2PBcRDovetail_9751:HG3_PB_SVrefine2Falcon1Dovetail_12307:HG3_Ill_SVrefine2DISCOVARDovetail_13787:HG2_PB_SVrefine2PBcRplusDovetail_7179:HG2_PB_SVrefine2PB10Xhap12_14463:HG2_PB_SVrefine2Falcon2Bionano_9818:HG2_PB_SVrefine2Falcon1plusDovetail_7745:HG2_Ill_SVrefine2DISCOVARplusDovetail_8224;NumExactMatchSVs=12;ClusterMaxShiftDist=0.017341;ClusterMaxSizeDiff=0.017341;ClusterMaxEditDist=0.0317003;PBcalls=15;Illcalls=4;TenXcalls=2;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-343;DistBack=10558;DistForward=-119;DistMin=-119;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=227;REFWIDENED=22:50061255-50061824;PctSeqSimilarity=0.9762;PctSizeSimilarity=1;PctRecOverlap=0.7587;SizeDiff=0;StartDistance=-83;EndDistance=-83;GTMatch=0;TruScore=91;MatchId=2439.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:60:1/1:2:24:2:26:./.:3:1:3:1:0/1:13:3:0/1:11:3:.:.:.
chr22	50460310	HG2_Ill_GATKHC_30785	TCTCCATCTGACGTGCACTCCTCCATCTGATGATGTGTACTCCTCCACCTGACATGCAGTC	T	20	PASS	ClusterIDs=HG2_Ill_svaba_23999:HG2_PB_pbsv_19777:HG3_PB_pbsv_19453:HG3_Ill_svaba_24246:HG3_Ill_GATKHC_30725:HG3_Ill_GATKHCSBGrefine_12599:HG3_Ill_150bpfermikitraw_24081:HG2_PB_assemblyticsfalcon_17054:HG2_Ill_svaba_24000:HG2_Ill_manta_5188:HG2_Ill_breakscan11_2829:HG2_Ill_GATKHC_30785:HG2_Ill_GATKHCSBGrefine_12764:HG2_Ill_150bpfermikitraw_24008:HG3_Ill_svaba_24245;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_150bpfermikitraw_24008:HG2_Ill_GATKHCSBGrefine_12764:HG2_Ill_GATKHC_30785:HG2_Ill_breakscan11_2829:HG2_Ill_manta_5188:HG2_Ill_svaba_24000:HG2_PB_assemblyticsfalcon_17054:HG3_Ill_150bpfermikitraw_24081:HG3_Ill_GATKHCSBGrefine_12599:HG3_Ill_GATKHC_30725:HG3_Ill_svaba_24246;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0333333;ClusterMaxSizeDiff=0.0333333;ClusterMaxEditDist=0.0504202;PBcalls=3;Illcalls=12;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=10;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-60;DistBack=309;DistForward=-43;DistMin=-43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=29;REFWIDENED=22:50460309-50460400;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:28:./.:25:18:8:7:./.:1:11:10:1:./.:6:1:./.:.:.:.:.:.
chr22	50464724	HG4_PB_SVrefine2PBcRDovetail_9944	AGCCGCCACCTCAGAGGGGAGGGTCAGACACAGAAATACGCCTGCCACTCTGCACAGCCACCACCTCAGAGTGGAGGGTCAGACACGGAAATACACCCGCCATTCTGCACC	A	20	PASS	ClusterIDs=HG4_PB_HySA_28291:HG2_PB_SVrefine2Falcon1plusDovetail_7752:HG3_PB_pbsv_19454:HG4_PB_pbsv_19704:HG2_PB_pbsv_19778:HG2_PB_assemblyticsPBcR_16495:HG3_PB_assemblyticsfalcon_16983:HG4_PB_SVrefine2PBcRDovetail_9944:HG4_PB_SVrefine2Falcon1Dovetail_12329:HG4_Ill_SVrefine2DISCOVARDovetail_13570:HG4_Ill_GATKHC_30689:HG4_Ill_GATKHCSBGrefine_13199:HG4_Ill_150bpfermikitraw_24159:HG3_PB_SVrefine2PBcRDovetail_9758:HG3_PB_SVrefine2Falcon1Dovetail_12317:HG3_Ill_GATKHCSBGrefine_12600:HG2_PB_SVrefine2PBcRplusDovetail_7185:HG2_PB_SVrefine2PB10Xhap12_14471:HG2_PB_SVrefine2Falcon1plusDovetail_7751:HG2_Ill_SVrefine2DISCOVARplusDovetail_8230:HG2_10X_SVrefine210Xhap12_13728:HG2_Ill_breakscan11_2830;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13728:HG2_Ill_SVrefine2DISCOVARplusDovetail_8230:HG2_PB_SVrefine2Falcon1plusDovetail_7751:HG2_PB_SVrefine2PB10Xhap12_14471:HG2_PB_SVrefine2PBcRplusDovetail_7185:HG2_PB_assemblyticsPBcR_16495:HG4_PB_SVrefine2PBcRDovetail_9944:HG4_PB_SVrefine2Falcon1Dovetail_12329:HG4_Ill_SVrefine2DISCOVARDovetail_13570:HG4_Ill_GATKHC_30689:HG4_Ill_GATKHCSBGrefine_13199:HG4_Ill_150bpfermikitraw_24159:HG3_PB_SVrefine2PBcRDovetail_9758:HG3_PB_SVrefine2Falcon1Dovetail_12317:HG3_Ill_GATKHCSBGrefine_12600;NumExactMatchSVs=15;ClusterMaxShiftDist=0.0452489;ClusterMaxSizeDiff=0.0452489;ClusterMaxEditDist=0.0542986;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=6;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=8;NumTechs=3;NumTechsExact=3;SVLEN=-110;DistBack=4336;DistForward=-102;DistMin=-102;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=163;REFWIDENED=22:50464706-50464978;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2442.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:29:0|1:25:8:3:18:0|1:7:1:0:10:0/1:11:11:./.:.:.:.:.:.
chr22	50628119	HG2_Ill_SpiralSDKrefine_10694	CGCTGGCCGGACCCCAGGTGATGCTCTGCTGGGACCCAGAGGGGGTGGCTGCAGTGTGT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13731:HG2_PB_pbsv_19785:HG3_PB_HySA_29405:HG3_PB_assemblyticsfalcon_16993:HG3_PB_pbsv_19465:HG3_Ill_svaba_24258:HG3_Ill_GATKHCSBGrefine_12604:HG3_Ill_250bpfermikitraw_24844:HG2_Ill_SpiralSDKrefine_10694:HG2_Ill_GATKHCSBGrefine_12767:HG2_Ill_250bpfermikitraw_25579:HG3_PB_SVrefine2PBcRDovetail_9764:HG2_PB_SVrefine2PBcRplusDovetail_7189:HG2_PB_SVrefine2PB10Xhap12_14476:HG2_PB_SVrefine2Falcon2Bionano_9827;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25579:HG2_Ill_GATKHCSBGrefine_12767:HG2_Ill_SpiralSDKrefine_10694:HG3_Ill_250bpfermikitraw_24844:HG3_Ill_GATKHCSBGrefine_12604:HG3_Ill_svaba_24258;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0677966;ClusterMaxSizeDiff=0.0677966;ClusterMaxEditDist=0.0689655;PBcalls=8;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=7;HG4count=0;NumTechs=3;NumTechsExact=1;SVLEN=-58;DistBack=21;DistForward=3012;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=119;REFWIDENED=22:50628100-50628276;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2443.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:39:1|0:7:34:14:2:./.:0:2:2:0:0/1:28:18:./.:.:.:.:.:.
chr22	50986299	HG4_PB_SVrefine2PBcRDovetail_9957	CCATCCCCAGCCCTAACCCCAGTCCCAACCCCAGCCCTAAGCCCAGCTCCAACTCCAGCCCTAACCCCAGCCG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13739:HG2_PB_pbsv_19803:HG3_PB_HySA_29425:HG3_PB_pbsv_19484:HG4_PB_pbsv_19729:HG4_PB_SVrefine2PBcRDovetail_9957:HG4_PB_SVrefine2Falcon1Dovetail_12349:HG4_PB_HySA_28320:HG4_Ill_svaba_23890:HG4_Ill_SVrefine2DISCOVARDovetail_13582:HG4_Ill_250bpfermikitraw_25160:HG3_PB_SVrefine2PBcRDovetail_9775:HG3_PB_SVrefine2Falcon1Dovetail_12336:HG3_Ill_svaba_24270:HG3_Ill_SVrefine2DISCOVARDovetail_13799:HG3_Ill_Krunchall_25380:HG3_Ill_GATKHC_30751:HG3_Ill_250bpfermikitraw_24853:HG2_PB_SVrefine2PBcRplusDovetail_7198:HG2_PB_SVrefine2PB10Xhap12_14487:HG2_PB_SVrefine2Falcon1plusDovetail_7768:HG2_Ill_svaba_24020:HG2_Ill_SVrefine2DISCOVARplusDovetail_8246:HG2_Ill_250bpfermikitraw_25588:HG2_Ill_150bpfermikitraw_24022;NumClusterSVs=25;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13739:HG4_PB_SVrefine2PBcRDovetail_9957:HG4_PB_SVrefine2Falcon1Dovetail_12349:HG4_PB_HySA_28320:HG4_Ill_svaba_23890:HG4_Ill_SVrefine2DISCOVARDovetail_13582:HG4_Ill_250bpfermikitraw_25160:HG3_PB_SVrefine2PBcRDovetail_9775:HG3_PB_SVrefine2Falcon1Dovetail_12336:HG3_Ill_svaba_24270:HG3_Ill_SVrefine2DISCOVARDovetail_13799:HG3_Ill_Krunchall_25380:HG3_Ill_GATKHC_30751:HG3_Ill_250bpfermikitraw_24853:HG2_PB_SVrefine2PBcRplusDovetail_7198:HG2_PB_SVrefine2PB10Xhap12_14487:HG2_PB_SVrefine2Falcon1plusDovetail_7768:HG2_Ill_svaba_24020:HG2_Ill_SVrefine2DISCOVARplusDovetail_8246:HG2_Ill_250bpfermikitraw_25588:HG2_Ill_150bpfermikitraw_24022;NumExactMatchSVs=21;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0273973;ClusterMaxEditDist=0.0416667;PBcalls=12;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=12;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=9;HG4count=7;NumTechs=3;NumTechsExact=3;SVLEN=-72;DistBack=26530;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=118;REFWIDENED=22:50986300-50986489;PctSeqSimilarity=1;PctSizeSimilarity=1;PctRecOverlap=1;SizeDiff=0;StartDistance=0;EndDistance=0;GTMatch=0;TruScore=100;MatchId=2444.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:33:0|1:14:2:3:30:./.:0:0:0:0:./.:4:3:./.:.:.:.:.:.
chr1	899922	HG3_Ill_SVrefine2DISCOVARDovetail_2	GGCTGCGGGGAGGGGGGCGCGGGTCCGCAGTGGGGCTGTGGGAGGGGTCCGCGCGTCCGCAGTGGGGATGT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3:HG2_PB_assemblyticsfalcon_10:HG3_PB_HySA_11:HG3_Ill_150bpfermikitraw_10:HG2_PB_PB10Xdip_2751:HG2_PB_PB10Xdip_2752:HG3_PB_pbsv_8:HG4_PB_pbsv_9:HG2_PB_pbsv_6:HG4_PB_SVrefine2Falcon1Dovetail_7:HG3_PB_SVrefine2PBcRDovetail_10:HG3_PB_SVrefine2Falcon1Dovetail_10:HG3_Ill_SVrefine2DISCOVARDovetail_2:HG2_PB_SVrefine2PBcRplusDovetail_10:HG2_PB_SVrefine2PB10Xhap12_15:HG2_PB_SVrefine2Falcon2Bionano_6;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3:HG4_PB_SVrefine2Falcon1Dovetail_7:HG3_PB_SVrefine2PBcRDovetail_10:HG3_PB_SVrefine2Falcon1Dovetail_10:HG3_Ill_SVrefine2DISCOVARDovetail_2:HG2_PB_SVrefine2PBcRplusDovetail_10:HG2_PB_SVrefine2PB10Xhap12_15:HG2_PB_SVrefine2Falcon2Bionano_6;NumExactMatchSVs=8;ClusterMaxShiftDist=0.106667;ClusterMaxSizeDiff=0.106667;ClusterMaxEditDist=0.174497;PBcalls=13;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-70;DistBack=15812;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=232;REFWIDENED=1:899923-900224;PctSeqSimilarity=0.9235;PctSizeSimilarity=0.9459;PctRecOverlap=0;SizeDiff=-4;StartDistance=-82;EndDistance=-86;GTMatch=0;TruScore=62;MatchId=1.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:52:1/1:2:12:0:9:./.:1:0:5:0:0/0:8:0:./.:.:.:.:.:.
chr1	1285401	HG2_Ill_MetaSV_3	AGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCTGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACCGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACCGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACCGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACCGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACCGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCTGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACCGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGGAGTGAGGAGGGGGCCTGGACGGGGCAGGAGCGACGGGGGG	A	10	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12:HG2_Ill_SVrefine2DISCOVARplusDovetail_13:HG3_Ill_MetaSV_6:HG2_Ill_MetaSV_3:HG4_Ill_MetaSV_6:HG4_Ill_SVrefine2DISCOVARDovetail_9;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_MetaSV_3:HG3_Ill_MetaSV_6;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0296779;ClusterMaxSizeDiff=0.0296779;ClusterMaxEditDist=0.0296886;PBcalls=0;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-1399;DistBack=-354;DistForward=-1352;DistMin=-1352;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=85;REFWIDENED=1:1285355-1286838;PctSeqSimilarity=0.2381;PctSizeSimilarity=0.7713;PctRecOverlap=0.7714;SizeDiff=320;StartDistance=-99;EndDistance=221;GTMatch=1;TruScore=59;MatchId=2.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:34:./.:0:0:4:0:./.:3:0:2:0:./.:11:1:0/1:9:37:.:2090:.
chr1	1865644	HG3_PB_SVrefine2PBcRDovetail_27	TGTGTGTATGTGTGAGTGTTAGGGTATAGGTACACACGTGTGTACGTGTGTTAGGCTGTAGGTACACAGGTGTATACGTGGGTGTTAGGTTGTAGGTACACAGGTGTACACGTGGGTGTTAGGTTGTAGGTACACAGGTGTATACGTGGGTGTTAGGTTGTAGGTACACACATGTGTACGTGTGTGTTAGGTTGTAGGTACACACGTGTGTACATGTGTGTTGTAGGTACACATGTGTGTATTAGGTTGTAGGTACACAGGTGTGTATGTGTGTTAGGTTGTAGGTACACAGGTGTATACGTGGGTGTTAGGTTGTAGGTACACAGGTGTATACGTGGGTGTTAGGTTGTAGGTACACACGTGTGTACGTGGGTGTTAGGTTATAGGTACACGTGTGTATGTGTGTGTGTTAGGTTGTAGGTACACACGTGTGTACGTGGGTGTTAGGCTGTAGGTACACACGTGTGTACGTGGGTGTTAGGCTGTAGGTACACAGGTGTGTACGTGGGTGTTAGGCTGTAGGTACACACGTGTGTACGTGGGTGTTAGGTTGTAGGTACACACGTGTGTACGTGGGTGTTAGGTTGTAGGTACACAC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_35:HG2_PB_pbsv_37:HG3_Ill_MetaSV_9:HG2_Ill_MetaSV_6:HG2_Ill_tnscope_1:HG3_PB_pbsv_38:HG4_PB_SVrefine2Falcon1Dovetail_31:HG3_PB_SVrefine2PBcRDovetail_27:HG3_PB_SVrefine2Falcon1Dovetail_32:HG3_Ill_SVrefine2DISCOVARDovetail_12:HG2_PB_SVrefine2PBcRplusDovetail_30:HG2_PB_SVrefine2PB10Xhap12_35:HG2_PB_SVrefine2Falcon2Bionano_25;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_35:HG4_PB_SVrefine2Falcon1Dovetail_31:HG3_PB_SVrefine2PBcRDovetail_27:HG3_PB_SVrefine2Falcon1Dovetail_32:HG3_Ill_SVrefine2DISCOVARDovetail_12:HG2_PB_SVrefine2PBcRplusDovetail_30:HG2_PB_SVrefine2PB10Xhap12_35:HG2_PB_SVrefine2Falcon2Bionano_25;NumExactMatchSVs=8;ClusterMaxShiftDist=0.150504;ClusterMaxSizeDiff=0.150504;ClusterMaxEditDist=0.254067;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-597;DistBack=-10917;DistForward=-543;DistMin=-10917;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=214;REFWIDENED=1:1865645-1866455;PctSeqSimilarity=0.9264;PctSizeSimilarity=0.9522;PctRecOverlap=0;SizeDiff=-30;StartDistance=-752;EndDistance=-782;GTMatch=0;TruScore=62;MatchId=4.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:18:0|1:18:0:6:20:0/0:46:1:49:1:0/0:78:0:0/0:102:2:.:.:.
chr1	4124298	HG2_PB_SVrefine2Falcon2Bionano_74	CCACTCACACTCACACACTCACTTATTCACTCACACTAGCTCACTCACTCACATTTAGTCATTCACTCACAGTCACTCGCTCACTCACACACACACTTGCTCAGTCACTCACTCACACTCATTCACTCACACACACTTGGTCACTCATTCACTCACTCACTTATTGACTCACACACTCGCTCAGTCACTCACACACTCATTCACTCACACATTCAGTCACTCATTCACTCACACACTCACACTCAGTCACTCACACGCTCATTCATTCACTCATACTCACACTCATTCACTCACACACTTGCTCAGTCACTCATTCACTCAGTCACTCATTCACTCACTCATTTACTCACACACACTCACTCAGTCACTCACTCGCTCACTCATTCATTCACTCATACTCACACTCATTCACTCACACACTTGCTCAGTCACTCATTCACACTCAGTCACTCAGTCACTCATTCACTCACACACATTTACTCACACACACTCATTCACTCACACACGCTCATTCATTCATACACTCATTCACTCACACACTCACACTCAGTCACTCTTACTCCCTCCCCACTCACACTCACTTACACTCACTTATTCACTCACACTAGCTCACTCACATTTAGTCATTCATTCACAGTCACTCGCTCACTCACACTCATACACACTTGCTCAGTCACTCACATTCACTCACTCATTTACTCACACACACAGTCACACACACTCGCTCACTCATTCATTCACTCATACACTCATTCACTCACACTTGCTCACTCAGTCATTCACTCACACACTCACATACTCAGTCACTCATTCACTCACACCCATCCACTCACTCATTCACTCACACACACTCATTCACTCACACGCTCACACTTGCTCACTCATTCACTCACTCATACTCATTCACTCACAGTCACTCATTCACTCACTCGCACACATTCACTCACTTATTCACTCACTCGCTCATTCACTCACACACACTCATT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_57:HG3_PB_SVrefine2Falcon1Dovetail_83:HG4_PB_SVrefine2PBcRDovetail_58:HG4_Ill_SVrefine2DISCOVARDovetail_45:HG2_PB_SVrefine2PBcRplusDovetail_77:HG2_PB_SVrefine2PB10Xhap12_97:HG2_PB_SVrefine2Falcon2Bionano_74:HG2_PB_SVrefine2Falcon1plusDovetail_92;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_57:HG4_Ill_SVrefine2DISCOVARDovetail_45:HG2_PB_SVrefine2PBcRplusDovetail_77:HG2_PB_SVrefine2PB10Xhap12_97:HG2_PB_SVrefine2Falcon2Bionano_74:HG2_PB_SVrefine2Falcon1plusDovetail_92;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0307062;ClusterMaxSizeDiff=0.0307062;ClusterMaxEditDist=0.171891;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-985;DistBack=14016;DistForward=-968;DistMin=-968;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=813;REFWIDENED=1:4124299-4126096;PctSeqSimilarity=0.8104;PctSizeSimilarity=0.5787;PctRecOverlap=0;SizeDiff=415;StartDistance=-1496;EndDistance=-1081;GTMatch=0;TruScore=46;MatchId=17.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:27:10:./.:14:0:8:7:0/0:197:1:7:0:0/0:59:0:0/1:139:21:1042:.:.
chr1	183358940	HG2_Ill_GATKHC_1572	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAAAAAGAGAAAGAAAGAAAGAAAGAAGGG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_783:HG3_Ill_GATKHC_1614:HG2_Ill_GATKHC_1572:HG3_Ill_GATKHC_1613;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_GATKHC_1572;NumExactMatchSVs=1;ClusterMaxShiftDist=0.167939;ClusterMaxSizeDiff=0.167939;ClusterMaxEditDist=0.167939;PBcalls=0;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-70;DistBack=25120;DistForward=37387;DistMin=25120;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=1:183358939-183359012;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=213.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:49:37:0|1:36:5:6:25:./.:22:3:1:3:0/1:24:3:./.:.:.:.:.:.
chr1	188947555	HG4_10X_allpass_168	AGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGGAGGGACGGAG	A	20	PASS	ClusterIDs=HG4_10X_allpass_167:HG4_Ill_svaba_1220:HG4_10X_allpass_168:HG2_Ill_svaba_1223;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_svaba_1223:HG4_10X_allpass_168:HG4_Ill_svaba_1220;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0625;ClusterMaxSizeDiff=0.0625;ClusterMaxEditDist=0.15625;PBcalls=0;Illcalls=2;TenXcalls=2;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-61;DistBack=-21;DistForward=-22;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=17;REFWIDENED=1:188947554-188947634;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=219.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:30:0|1:23:4:6:23:1|0:0:11:34:1:0/1:10:9:./.:.:.:.:.:.
chr1	195112192	HG2_Ill_250bpfermikitraw_1410	AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAAAG	A	10	PASS	ClusterIDs=HG4_Ill_scalpel_968:HG3_Ill_GATKHC_1727:HG3_Ill_GATKHCSBGrefine_706:HG2_Ill_GATKHC_1697:HG2_Ill_GATKHCSBGrefine_682:HG4_Ill_GATKHC_1655:HG4_Ill_GATKHCSBGrefine_719:HG3_Ill_GATKHC_1726:HG3_Ill_GATKHCSBGrefine_705:HG2_Ill_GATKHC_1696:HG2_Ill_GATKHCSBGrefine_681:HG3_Ill_svaba_1309:HG3_Ill_Krunchall_1445:HG3_Ill_250bpfermikitraw_1391:HG3_Ill_150bpfermikitraw_1322:HG2_Ill_svaba_1287:HG2_Ill_manta_300:HG2_Ill_Krunchall_1414:HG2_Ill_250bpfermikitraw_1410;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_250bpfermikitraw_1410:HG2_Ill_Krunchall_1414:HG2_Ill_manta_300:HG2_Ill_svaba_1287:HG3_Ill_150bpfermikitraw_1322:HG3_Ill_250bpfermikitraw_1391:HG3_Ill_Krunchall_1445:HG3_Ill_svaba_1309;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0727273;ClusterMaxSizeDiff=0.0727273;ClusterMaxEditDist=0.0754717;PBcalls=0;Illcalls=19;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=8;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-52;DistBack=29;DistForward=-23;DistMin=-23;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=31;REFWIDENED=1:195112191-195112276;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=230.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:9:45:1/1:2:26:1:6:./.:1:0:2:9:./.:3:25:./.:.:.:.:.:.
chr1	242556207	HG2_PB_SVrefine2PBcRplusDovetail_887	AATAAAAGTATTTTTAGGCAGGGCCGCAGTGGCTCACGCCTGTATTCTCAGCACTTTGGGAGGCCGAGGCGGGTGGATTACCTGAAGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATGCAAAAATTAGCTGGGTGTGGGGATGCGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGCGGAGGTTGCAGTGAGCTGAGATCACGCCACTGAACTCCAGCCTGGATAAGACGACGACTCCGTCTCAAAAAAATATATATATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATATGTGTATATATGAGTATATATATGTGTATATATGAGTATATATATATGTGTATATATGTGAGTATATATATGTGTATATATATGAGTATATATGTGTATATATATGAGTATACATATGTGTATATATATGAGCATATATGTGTATATATATGAGTATATATATGTGTATATATATGAGTATATATGTGTATATATATGAGTATATATGTGTATATATATGAGTATATATGTGTGTATATATGAGTATATATGTGTGTATATATGAGTATATATGTGTGTATATGAGT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_426:HG4_PB_assemblyticsfalcon_1957:HG4_PB_SVrefine2Falcon1Dovetail_850:HG2_PB_SVrefine2PBcRplusDovetail_888:HG2_PB_assemblyticsPBcR_2025:HG2_Ill_SVrefine2DISCOVARplusDovetail_1070:HG3_PB_SVrefine2PBcRDovetail_729:HG3_Ill_MetaSV_381:HG3_Ill_SVrefine2DISCOVARDovetail_954:HG2_PB_SVrefine2PBcRplusDovetail_887:HG2_PB_SVrefine2PB10Xhap12_1089;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_426:HG3_Ill_SVrefine2DISCOVARDovetail_954:HG2_PB_SVrefine2PBcRplusDovetail_887:HG2_PB_SVrefine2PB10Xhap12_1089;NumExactMatchSVs=4;ClusterMaxShiftDist=0.183439;ClusterMaxSizeDiff=0.183439;ClusterMaxEditDist=0.189809;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-856;DistBack=2819;DistForward=-554;DistMin=-554;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=660;REFWIDENED=1:242556208-242557723;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=306.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:25:0|1:22:2:2:23:./.:54:0:5:5:./.:46:5:./.:67:7:.:.:.
chr1	244649946	HG3_PB_pbsv_1338	CTGGTGGGTGGTCCAGCATGTGGAGTACTCGTGGGCCAGGTATAGACCCTCGTAGTCA	C	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_1982:HG3_PB_pbsv_1338:HG4_Ill_GATKHC_2207:HG4_Ill_scalpel_1277:HG2_PB_pbsv_1357;NumClusterSVs=5;ExactMatchIDs=HG3_PB_pbsv_1338;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0504202;ClusterMaxSizeDiff=0.0504202;ClusterMaxEditDist=0.169492;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-57;DistBack=-334;DistForward=2;DistMin=-334;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1003;REFWIDENED=1:244649557-244650616;PctSeqSimilarity=0.9838;PctSizeSimilarity=0.9661;PctRecOverlap=0;SizeDiff=-2;StartDistance=154;EndDistance=152;GTMatch=0;TruScore=64;MatchId=309.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:26:./.:17:8:5:11:./.:5:0:1:0:./.:15:1:./.:.:.:.:.:.
chr1	244784320	HG3_Ill_svaba_1719	AATATATATAAATATATATAAAATATATATATAAATATATATAAATATATATAAAAT	A	10	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_1333:HG4_Ill_svaba_1701:HG4_Ill_scalpel_1279:HG3_Ill_svaba_1719:HG3_Ill_scalpel_1414:HG2_Ill_svaba_1683:HG2_Ill_scalpel_1324;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SpiralSDKrefine_1333:HG4_Ill_svaba_1701:HG4_Ill_scalpel_1279:HG3_Ill_svaba_1719:HG3_Ill_scalpel_1414:HG2_Ill_svaba_1683:HG2_Ill_scalpel_1324;NumExactMatchSVs=7;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-56;DistBack=20200;DistForward=30;DistMin=30;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=30;REFWIDENED=1:244784319-244784407;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=311.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:19:./.:44:14:0:1:./.:0:4:0:5:1/1:1:33:./.:.:.:.:.:.
chr2	2796470	HG3_Ill_scalpel_1520	CGCAGGCCACCCTCCATGGGGAAGAGCCTCAGGGATCAGCACCCACTCAGGCAGGAGGAT	C	20	PASS	ClusterIDs=HG3_Ill_scalpel_1520:HG4_PB_HySA_2309:HG2_Ill_SpiralSDKrefine_8126:HG2_PB_pbsv_1577:HG3_PB_pbsv_1569:HG4_Ill_scalpel_1370;NumClusterSVs=6;ExactMatchIDs=HG3_Ill_scalpel_1520:HG4_Ill_scalpel_1370;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0169492;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.2;PBcalls=3;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-59;DistBack=-114;DistForward=53;DistMin=-114;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=472;REFWIDENED=2:2796450-2796980;PctSeqSimilarity=0.9852;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-336;EndDistance=-336;GTMatch=0;TruScore=66;MatchId=1845.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:26:1|0:3:21:31:4:./.:6:0:1:0:0/0:11:0:./.:.:.:.:.:.
chr2	44484172	HG2_PB_SVrefine2PBcRplusDovetail_5608	ACAGTGGCTAACACCTGTAACCCCAGCCCTTTGGGAGGCTGAGGCTGGCAGTTCACATGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAGTTAGCTGGGCATGGTGGTGCACACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGGAGAACCGCTTGAACCCAGGAGGCAGAGGCTGCAGTGAAACAAGATTGCACTACCGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAGACTCAACTAATCAAAAGGATTATAAATATAAACATGTGTGTATCTAATAACAGTTTCAAAATACACAAGGCAAAAGCTGATAGAAGTAAGAAGAGAACTGGACAAATTCACCTTTATAGTTGGAGGTCTCAACACTTCTCTGTCAATAATTGATAGAACAAGTAGACAAAAAATGGATAAGGATATAGAAGACTTGGCCGGGCACGGTGGCTCACGCCTGTAATGGGGAGGCCAAGGCAGGTGGATCATGAGGTCAGGAGTTCAAGACCAACCTGGCCAACATGATGAATCCCCGTCTCTACGAAAAATACAAAAATTAGCTGGACGTGGTTGTGGACCTGTAATCCCAGCTATTCGGGAGGCTGAGGCAGGAGAATTGCTTGAATCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCGTGGCACTGCACTCCAGCCTGGGTAACAGTGAGACTCTGTCTCAGAAAAAAAAACACAACACCACCAATCAACTTGCCTAAAATGACATTTATACAATACTCCACCCAACAACATGAGACTACATATTCTTTTTAAATGCCCACAAAACATCCACAAAGATGGACTATGTTCTGGGCTATACAGGGAGTCTCACTAAATGTAAGGAAGGTTGTAATTATACAAGGCATGTTTCTGGTCATGGGGAGGATCCCTCATGACTGTCTTGTGCCTTTCTTGCAGTAATGAATGAGCTCTTGCTCTATTAGTTCCCACAAGAACTGGTTGTTAAAAAAAACTTGGGGCCAGGCGTGGTGACTCATGCCTGTAATCTCAGCACTTTGGGAGGCCAAGGTGGGAGGATCACTTGAGCCCAGGAGTTTGAGACCAGCCTGAGCAACATAGGGAGACCCCATCTCTACAAAAAAAAAATCGTTTTTTACTTAGTTGGGCGTGGTGGTGTGCACCTGTGGTCCCAGCTACTAAGGAGGCTGAGGCAGGAGGATCACTTGACCCCAGGAGGTCAAGGCTGCAGTGAGCTGTGATCATGCCACAGCGCTCCAGCCTGAGTGACAGAGCAAGACCTTGTCCTTTGTCTCAAAAACAAAAACAAATGAAAAAAACTAGGCATATCCCCCCTCTCTCTTGCTTCTATGTGATCCCTGCACATGTCAGTTCAGCTTTACCTTCCACCATGAGCAGAAGCAGTCTGAAGCCCTCACCAGAAGCAGATACTGGCACCATGCTTCTTGTACAGCCTGCAGAAACATGAGACAAATAAGCCTCTTTTCTTTATAAATTACCCAGCCTCAAGTATTCCTGTATGGCAACACAAACGGACTAAGACATCCTCCAACACTTTCCCTACTTCAAATGTAGCCATTCTTTTAGGTGTGATTTCCATGTTAGAATTAACCTAGTAATAACTGAAGGATAAAAACAACACACTGCTAAATAATTCATGTGCAAAGAATATATTACAAGTGAAATTAGAAAATACCTTGACTAGCATGAAAATGAAAACAATTTATCAAAATCTGTGGGCTGCAGCTAAGGCAGTGTTTACAGGGAAATTTATAACTTGAAACACATATTAGTCCAGTTGTGGTGCCTCACGCCTATAATCCTAACACTTTGCGAGGCCGAGGCAGGCGGAGTACTTGAACTCAGGAGTTAGAGACCAGCCAGGGCAACGTGGCAAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCAGGGTGGCACGGGCCTGTAATCCCAGCTACACGGGAGGCTGAGTCATGAGAATAGCTTGAACCTGGGAGGTGGAGATTACAGTGAGCCGAAATCATGCCACTGCACTCCAGCCTGGGTGACAGACTCTGTCTCCAAAAAGAAAAAAGTAAAAGAAAAAACACATATCAGAAAAAATGTAAGATCACAGATTAATGATTTACCAACTTAAGAATTAAGTACAAGTGCAAGAAAGGAAGGAAACAATAAGAGTAGAAATGGATGGCATAGAATATGGAAAATAGAGGAAAATCAAAACCTGGCTCTTTGAAAAATATGAATAGCATTAATAAACCTCTCTAACCAGACCAAATCAGGAAAAAAGAAAGACACACATTATTAATATCAGGAATGAAAGGGAAGATATCACGACAAACCTGACAGACATTTTTTTTCTTGAGACAGGGTCTCACTCTGTTGTCCAGGCTAGAGTGCAGTGGCACCATCATAGCTTCCTGCAGTTTTTTTTTTTTTTCTCTTTTGAAACGGAGTTTCCACTCTTGTTGCACAGGCTGGAGTTCAGTGGCGCAATCTCAGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCCGAGTAGTTGGGATTACAGGCACGCACCACCACACCCGGCTAACTTTTTGTATTTTTAGTAGAGATGGGGTTTTACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACTTCAAGTGATCTGCCCTTCTCAGCCTCCCAAAGTGTTGGGATTACAGGTGTGAGCCACTGCACCCAGTATAGCTTCCTGCAGGCTTGACCTCCCAGTCTTGAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGTCTACAGAAGTGTGCACCCATTTCTAGCTAATTTTTGTATTTTTAATATAAACAGGGTTTCACTGTGTTGCCTAGGCTATCTGGAACTCCTGGGCTCAAGGGATCCTCCTGCCTTGGCCTCTCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCTGGGCTAGACATTTTTTTAAAGTTAAAGGAATACCATGAAAATGTTTATACTAATAAATTTGACACCTTAAAGGAAATGAACAAATCCCTTGAAAGGCATAAACTACCAAATTTCACTCAAGAAAAAACAGGTAACTTGAATAGCCCTGTGTTTTTTGAAGAAATTGAATTCATAATTGGATAGCCCTATATCTATTACAGAAATAATTGCCTAGATATAATACTAAATATACATAAAGTCTCCCAGAGAATTGAAGAGGAGGGAGTCCCTCCAAAACCATTTTATAAAATTACCGTTACTTTGATATGAAACCAGACAAATCTATTACAAGGAGAAAAAACTACAGACCAATATCTCTAATAAATATTGTTGCAATAATTTTTAACAAAATTTCAGCAAACTGAATCTAGCACAATACAGCAAGAATAACAGCTTATGACCAAGTGGGATGCATCCCAAGAATGCAAGATAAGTTTAACATTTGGAAGTCAATCAATGCAATTCGACATGTGAAGTTGAAAAAAATCAAAAAACAAAACCATTTCATTGCCTCGTTAGATTCAGAAAAAGCATTTGACAAATATGGGACCCAGTCAAGACAGAAATTCTCAGCAAACTACCAATAAAAGAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAATTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATCTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTAGAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCCAGAGGCATCACGCTACCTGACTTCAAACTACACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATCATGCCGCATATCTAAGACCATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTACATGTTAGACCTAAAACCATAAAAACCGTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACAAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTATCTCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATAAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGTGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGTGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTGTAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAACGATAGACTGGATTAAGAAAAGGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAACTGGAAACCATCATTCTTAGCAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAACTGAACAATGAGAACACATGGACACAGGTAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGAGAGGGGAGGGATAGCATTAGGAGATATACCTAATATTAAATGACAAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACTAACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTGTAATAATAATAAAATTTAAAAAAAAACACACAGGAAAACAAATAAACAAAAGAAACCGTAGAAGGTATTTAGGTGGGGTGGGGGAAGGGGTTGTCACTTTTTATTTCATACACTTCTGTATCATTTGAATTTCTAAAAAAAGTTTGTATCAGGATTGTTAACAAAAAATGAATAAGAGAAAATAAATAAGTTTAGAAGGGTCAAAAAAAAAGAGAGAAACTGCTCAACTTGATAAAGGATAACTGTGTTACGACTAAACCTAACATCATGCTGGGTGGTGAATCCATAAGGGTCTGCAGCAACCTCAGTTCTTGCCTCCTCAGATGAAATAATTCGACTAAGTGACAGAAGGCAGAGTGTGAGACTGAGGCAAGTTTTAGAGCAGGAGTGAAAGCTTATTAAAAAGCTTTAGAGCAGGAATGCAAGGAAGTAAAGTACACTTGGAAGAGGGTCAAGTGGGTGACTTGAGAGATCAAGTGCAGTTTCACCTTTGACTTGGGATTTTATACATTTGTGTGCTTCTGGGGTCTTGCATCCCTTCTCTGATTCTTCCCTTGAGGTGGGCTGTCCAAGTGCGCAGTGGCCTGTCAGCGCTTCGAAGGGGTCACACGTGCAGTGTGTTTACTGGAGTTGTATGCATGCTCACTTGAGGCATTCTTCCCTTACCAAAGGTTCCTAGGTCATAGGCCAGTTAAATGCCGCCATTTTTGCCTTCAGTGCACATATGTGAGCCCACTCGCCCTACTCCTGAGATTTTATTGGGAAGCTGCTGATCGCATTTCAGGTTTTTTCTGTCTATTGGGAGGCTGCCCCTTCCTGGTGCCAGTTGCAACCAATTATTATTTTAGAGTGACAGTTAACAACCATCTGACCATCACCTGCTGGTTGCCTGATATTCCTGGGGGAGGGCAAGGGGCCCTCTCCTGCCCTGCTCATGCCTGACCAGCTACCTACTGTAACAATACTTAATGGTAAAAGACTGAATGTTCCCTCTAACACAGGGAACAAGGCAAGAATGTCTGTCTGCTCTCGCCACTTGTATTCAGTATTGACTGGAGATCAACTGCCAGTATAGTAAGGCAAAACAAATAAATAAAAGGAAATAAAAGGCATAAATATTGGAAAGAAACAAAATGGTCTTTATTTGCAGATGACATGATTATGTAAATAGAAATTCATAAAGAATCTATAAATAAGGTATTAATAAGCTTAGCAAGGTCACAGGATTCAAGGTCAATGTACCAGTATGCATTTCTATATATTAGGATCAAACAGTTAAAAATTGAAATTAAAAAATCAATACCATTTACGATAGCATTCAAAACTATGAAATACGGCCAGGTG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6073:HG3_PB_pbsv_1844:HG2_10X_allpass_272:HG3_10X_allpass_335:HG3_Ill_MetaSV_2630:HG2_PB_pbsv_1860:HG2_Ill_tnscope_189:HG3_PB_pbsv_1843:HG3_Ill_Krunchall_2433:HG4_PB_SVrefine2Falcon1Dovetail_1157:HG2_PB_SVrefine2PBcRplusDovetail_5608:HG2_PB_SVrefine2Falcon2Bionano_697;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6073:HG4_PB_SVrefine2Falcon1Dovetail_1157:HG2_PB_SVrefine2PBcRplusDovetail_5608:HG2_PB_SVrefine2Falcon2Bionano_697;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0129234;ClusterMaxSizeDiff=0.0129234;ClusterMaxEditDist=0.0149137;PBcalls=7;Illcalls=3;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=1;SVLEN=-7085;DistBack=7202;DistForward=22378;DistMin=7202;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=293;REFWIDENED=2:44484173-44491550;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1908.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:60:64:./.:34:1:6:16:./.:8:3:66:0:./.:65:6:0/1:436:184:7117:.:.
chr2	112871187	HG2_PB_SVrefine2PBcRplusDovetail_5791	CAAGATTCATAACTCTACAGAAAGATGTAGCATTACAGAAAGATTCATAACTCTACAGAAAGATGTAGCATTACAGAAAGATTCATAACTCTACAGAAAGATGTAGCATTACAGAAAGATTCATAACTCTACAGAAAGAGGTAGCATTACAGAAAGATTCATAACTCTACAGAAAGATGTAGCATTACAGAAAGATTCATAACTCTACAGAAAGATGTAGCATTACAGAAAGATTCATAACTCTACAGAAAGAGGTAGCATTACAGAAAGATTCATAACTCTACAGAAAGAGGTAGCATTACAGAAAGATTCATAACTCTACAGAAAGATGTAGCATTACAGA	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_837:HG4_PB_pbsv_2164:HG4_PB_SVrefine2PBcRDovetail_1144:HG4_PB_assemblyticsfalcon_13683:HG4_PB_SVrefine2Falcon1Dovetail_1285:HG2_PB_pbsv_2145:HG3_PB_pbsv_2128:HG3_PB_SVrefine2PBcRDovetail_1099:HG2_PB_SVrefine2Falcon1plusDovetail_6273:HG2_PB_SVrefine2PBcRplusDovetail_5791:HG2_PB_SVrefine2PB10Xhap12_1660;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_837:HG2_PB_SVrefine2PBcRplusDovetail_5791:HG2_PB_SVrefine2PB10Xhap12_1660;NumExactMatchSVs=3;ClusterMaxShiftDist=0.273159;ClusterMaxSizeDiff=0.273159;ClusterMaxEditDist=0.320665;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-342;DistBack=456;DistForward=-343;DistMin=-343;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=214;REFWIDENED=2:112871188-112871743;PctSeqSimilarity=0.9747;PctSizeSimilarity=0.9;PctRecOverlap=0;SizeDiff=-38;StartDistance=-988;EndDistance=-1026;GTMatch=0;TruScore=62;MatchId=1981.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:31:0|1:23:2:7:27:./.:5:0:3:0:0/0:17:0:./.:4:3:.:.:.
chr2	120309863	HG2_PB_SVrefine2Falcon2Bionano_873	TAATAAATAGAAATATTTCTTTCTTTAATAAGAAATAAATAGAAATATTTCTTTCTTTAATAAGA	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_873:HG2_PB_pbsv_2206:HG3_PB_pbsv_2188:HG4_PB_SVrefine2Falcon1Dovetail_1322:HG3_PB_SVrefine2Falcon1Dovetail_1372:HG2_PB_SVrefine2PBcRplusDovetail_5835:HG2_PB_SVrefine2PB10Xhap12_1698;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_873:HG4_PB_SVrefine2Falcon1Dovetail_1322:HG3_PB_SVrefine2Falcon1Dovetail_1372:HG2_PB_SVrefine2PBcRplusDovetail_5835:HG2_PB_SVrefine2PB10Xhap12_1698;NumExactMatchSVs=5;ClusterMaxShiftDist=0.015625;ClusterMaxSizeDiff=0.0155039;ClusterMaxEditDist=0.03125;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-64;DistBack=21489;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=512;REFWIDENED=2:120309864-120310439;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1993.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:13:79:1/1:3:17:1:32:./.:0:0:0:0:./.:0:1:./.:.:.:.:.:.
chr2	124441887	HG4_PB_SVrefine2PBcRDovetail_1188	ATCTAGCTCAAGGTTTGTAAATACACCAATCAGCACCCTGTGTTTAGCTCAAGGTTTGTGAGTGCACCAATCGACACTCTGTGTCTAGCTGCTCTAGTGGGGCCTTGCAGAACCTTTATGTCTAGCTCAGGGATTGTAAATACACCAATCAGCCCCCTGTGTTTAGCTCAAGGTTTGTGAGTGCACCAATCGACACTCTGTATCTAGCTGCTCTGGTGGGGCCTTGCAGAACCTTTATG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_5848:HG2_PB_pbsv_2237:HG4_PB_pbsv_2255:HG4_PB_SVrefine2PBcRDovetail_1188:HG3_PB_SVrefine2Falcon1Dovetail_1390:HG3_Ill_SVrefine2DISCOVARDovetail_1554;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_5848:HG4_PB_SVrefine2PBcRDovetail_1188:HG3_PB_SVrefine2Falcon1Dovetail_1390:HG3_Ill_SVrefine2DISCOVARDovetail_1554;NumExactMatchSVs=4;ClusterMaxShiftDist=0.00420168;ClusterMaxSizeDiff=0.00419287;ClusterMaxEditDist=0.125786;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-238;DistBack=-239;DistForward=-239;DistMin=-239;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1129;REFWIDENED=2:124441888-124443254;PctSeqSimilarity=0.9752;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-583;EndDistance=-583;GTMatch=0;TruScore=65;MatchId=2000.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:11:0|1:14:0:1:10:./.:17:2:14:0:0/0:43:0:./.:.:.:.:.:.
chr2	134995195	HG2_Ill_SVrefine2DISCOVARplusDovetail_6892	TTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGTTGGAGTGCAGTTTTTGTTTTTG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6892:HG4_PB_assemblyticsfalcon_13873:HG2_PB_pbsv_2301:HG2_PB_HySA_4327:HG3_Ill_svaba_2863:HG2_PB_assemblyticsPBcR_13651:HG3_PB_pbsv_2286:HG3_Ill_GATKHC_3763:HG3_Ill_GATKHCSBGrefine_1506:HG4_Ill_SVrefine2DISCOVARDovetail_1672:HG3_PB_SVrefine2Falcon1Dovetail_1422:HG3_PB_HySA_3514:HG3_Ill_SVrefine2DISCOVARDovetail_1611;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6892:HG4_Ill_SVrefine2DISCOVARDovetail_1672:HG3_PB_SVrefine2Falcon1Dovetail_1422:HG3_PB_HySA_3514:HG3_Ill_SVrefine2DISCOVARDovetail_1611;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0967742;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.129032;PBcalls=7;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=7;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-65;DistBack=475;DistForward=-66;DistMin=-66;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=119;REFWIDENED=2:134995196-134995379;PctSeqSimilarity=0.9925;PctSizeSimilarity=0.9846;PctRecOverlap=0;SizeDiff=1;StartDistance=-66;EndDistance=-65;GTMatch=0;TruScore=65;MatchId=2013.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:30:./.:2:22:12:7:./.:0:2:6:1:0/1:4:6:./.:.:.:.:.:.
chr2	176677800	HG2_PB_pbsv_2471	AAAAAAAAAAAAAAAAGAAAAAGAAAACACCACTTAGAGTTTTTGAAATAGAGGGAGTTTAGAAAATGTGTCCAGTTGTGAAGAACATGAAAGCTTAATCCAAAATAATCAGGTCAAAAAATTCCAGATTCTGGGAAATTGTATAACGCCATTTGTTGGAGAAAATGTACCTGCAGGAGAGACTGGAAGAAGAATGGCCAGAGCTCTGGGTTCAAAGACAGCTCTGTCACCAGTCTCTGTGGTCTTATCTCTAAGAGGGGCGCGTACCTTCACAGTTTCACAATGACCCTCCCAGGCTGGTGTTTAAAGATTACAAGTTGCGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATCACCTGAGGTCCGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCCACTAAAAATACAAAATTAGCCCAGCGTGGTCGCACATGCATGTAATCCCAGCTACTCCGGAGGCTGAGGCAGGAGAATGGCTTGAACCTGGGAGGTGGAGGTTGCTGTGAGCCGAGATCGTGCCGTTGCACTCCAGCCTGGGAAACAAGAGCGAAACTTCCTCTC	A	20	PASS	ClusterIDs=HG3_Ill_SVrefine2DISCOVARDovetail_1812:HG3_PB_pbsv_2462:HG4_PB_pbsv_2483:HG2_PB_SVrefine2Falcon2Bionano_1018:HG3_PB_pbsv_2461:HG2_PB_SVrefine2PB10Xhap12_1865:HG4_PB_SVrefine2PBcRDovetail_1304:HG3_PB_SVrefine2Falcon1Dovetail_1533:HG2_PB_pbsv_2471:HG3_PB_SVrefine2PBcRDovetail_1265:HG3_PB_HySA_3861:HG2_PB_SVrefine2Falcon1plusDovetail_6471;NumClusterSVs=12;ExactMatchIDs=HG2_PB_pbsv_2471:HG3_PB_SVrefine2Falcon1Dovetail_1533:HG4_PB_SVrefine2PBcRDovetail_1304;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0281224;ClusterMaxSizeDiff=0.0281224;ClusterMaxEditDist=0.0451883;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=6;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-602;DistBack=3830;DistForward=-599;DistMin=-599;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=651;REFWIDENED=2:176677794-176679047;PctSeqSimilarity=0.9797;PctSizeSimilarity=0.9601;PctRecOverlap=0.0016;SizeDiff=-25;StartDistance=-602;EndDistance=-627;GTMatch=1;TruScore=64;MatchId=2068.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:47:0|1:24:0:2:40:0|1:24:0:0:11:0/1:13:3:0/1:11:9:.:.:.
chr2	188502070	HG2_PB_assemblyticsPBcR_14098	ACTTCCCAGATGGGGCGGCCGGGTAGAGGCGCTCCTCGCTTCCCAGACGGGGCGGCCGGGCAGAGGCCCTCCTCG	A	20	PASS	ClusterIDs=HG4_PB_pbsv_2535:HG3_PB_assemblyticsfalcon_14508:HG2_PB_assemblyticsPBcR_14098:HG3_PB_pbsv_2517:HG2_PB_pbsv_2523:HG4_PB_assemblyticsfalcon_14275:HG4_Ill_GATKHCSBGrefine_1751;NumClusterSVs=7;ExactMatchIDs=HG2_PB_assemblyticsPBcR_14098:HG3_PB_assemblyticsfalcon_14508;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0402685;ClusterMaxSizeDiff=0.0402685;ClusterMaxEditDist=0.0816327;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-74;DistBack=-93;DistForward=-9;DistMin=-93;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=2:188502069-188502191;PctSeqSimilarity=0.9947;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=94;EndDistance=94;GTMatch=0;TruScore=66;MatchId=2081.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:46:./.:13:27:16:7:./.:1:0:4:0:./.:4:0:./.:.:.:.:.:.
chr2	191248205	HG2_Ill_SVrefine2DISCOVARplusDovetail_7138	CTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCTGGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGCCACCATGCCCGGCTAATTTTTTGTGTATTTTTAGTAGAGAAGAGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTTGTGATCTGCCTGCCTCGGCCTCCCAAAATGATGGGACTACACAGGTGTAAGCCACCACGCCCGACCCTT	C	20	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_1524:HG4_PB_pbsv_2550:HG2_PB_pbsv_2536:HG3_Ill_MetaSV_2852:HG2_PB_HySA_4835:HG2_Ill_150bpfermikitraw_3197:HG3_PB_pbsv_2530:HG3_PB_HySA_3973:HG2_Ill_MetaSV_2710:HG4_Ill_SVrefine2DISCOVARDovetail_1905:HG3_PB_SVrefine2PBcRDovetail_1303:HG3_Ill_SVrefine2DISCOVARDovetail_1882:HG2_PB_SVrefine2PBcRplusDovetail_6047:HG2_PB_SVrefine2Falcon2Bionano_1059:HG2_Ill_SVrefine2DISCOVARplusDovetail_7138:HG2_10X_SVrefine210Xhap12_1933:HG4_PB_SVrefine2PBcRDovetail_1339:HG3_PB_SVrefine2Falcon1Dovetail_1577:HG2_PB_SVrefine2Falcon1plusDovetail_6520;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_1933:HG2_Ill_SVrefine2DISCOVARplusDovetail_7138:HG2_PB_SVrefine2Falcon2Bionano_1059:HG2_PB_SVrefine2PBcRplusDovetail_6047:HG3_Ill_SVrefine2DISCOVARDovetail_1882:HG3_PB_SVrefine2PBcRDovetail_1303:HG4_Ill_SVrefine2DISCOVARDovetail_1905;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0200334;ClusterMaxSizeDiff=0.0199336;ClusterMaxEditDist=0.066778;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-298;DistBack=17307;DistForward=-2;DistMin=-2;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=533;REFWIDENED=2:191248206-191249036;PctSeqSimilarity=0.9717;PctSizeSimilarity=0.9868;PctRecOverlap=0.0066;SizeDiff=-4;StartDistance=-297;EndDistance=-301;GTMatch=0;TruScore=65;MatchId=2084.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:62:./.:0:1:0:1:0/0:9:0:8:0:0/0:31:2:./.:.:.:.:.:.
chr2	205922043	HG2_Ill_manta_751	TTATATATGTATATGTGTTATATACATATACATATATACATGTATATGTGTTATATACATATACATA	T	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_3579:HG3_Ill_250bpfermikitraw_3532:HG2_Ill_SpiralSDKrefine_9309:HG2_Ill_GATKHC_4299:HG2_Ill_250bpfermikitraw_3580:HG4_PB_HySA_3964:HG4_Ill_svaba_3319:HG4_Ill_manta_641:HG4_Ill_Krunchall_3799:HG4_Ill_GATKHC_4356:HG4_Ill_GATKHCSBGrefine_1816:HG4_Ill_250bpfermikitraw_3595:HG4_Ill_150bpfermikitraw_3474:HG2_Ill_svaba_3228:HG2_Ill_manta_751:HG2_Ill_Krunchall_3632:HG2_Ill_GATKHC_4298;NumClusterSVs=17;ExactMatchIDs=HG2_Ill_250bpfermikitraw_3579:HG4_Ill_svaba_3319:HG4_Ill_manta_641:HG4_Ill_Krunchall_3799:HG4_Ill_GATKHC_4356:HG4_Ill_GATKHCSBGrefine_1816:HG4_Ill_250bpfermikitraw_3595:HG4_Ill_150bpfermikitraw_3474:HG2_Ill_svaba_3228:HG2_Ill_manta_751:HG2_Ill_Krunchall_3632:HG2_Ill_GATKHC_4298;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0148148;ClusterMaxSizeDiff=0.0148148;ClusterMaxEditDist=0.0296296;PBcalls=1;Illcalls=16;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=12;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=1;SVLEN=-66;DistBack=2875;DistForward=-62;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=422;REFWIDENED=2:205921981-205922468;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2107.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:54:./.:11:27:5:21:./.:4:6:0:14:1/1:1:30:./.:.:.:.:.:.
chr2	234123638	HG2_PB_SVrefine2PB10Xhap12_2062	CAAGGGTGCGGAGAATGACGAAGAACCTTGTTAAGGGTGGGGAGAATGATGAAGAACCTTGTTAAGTGTGGGGAGAATGATGAAGAACCTTGTT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2062:HG4_Ill_250bpfermikitraw_3886:HG2_PB_SVrefine2Falcon2Bionano_1205:HG4_PB_pbsv_2784:HG2_PB_pbsv_2780:HG4_Ill_SVrefine2DISCOVARDovetail_2102:HG3_PB_SVrefine2PBcRDovetail_1388;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_2062:HG4_Ill_SVrefine2DISCOVARDovetail_2102:HG3_PB_SVrefine2PBcRDovetail_1388;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0213904;ClusterMaxSizeDiff=0.0212766;ClusterMaxEditDist=0.0638298;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-93;DistBack=14006;DistForward=-76;DistMin=-76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=290;REFWIDENED=2:234123639-234124021;PctSeqSimilarity=0.9894;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-282;EndDistance=-282;GTMatch=0;TruScore=66;MatchId=2149.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:33:15:./.:18:4:9:8:./.:15:1:19:1:0/0:28:0:./.:.:.:.:.:.
chr2	238456193	HG3_PB_assemblyticsfalcon_14992	AGCTCCCCGTGTTCAGGTGGAGTGGTTAGGAGTAGGAGCAGTGCACAGAGGGCAGAGCCAGCCTGGGAGGGAGTT	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2090:HG2_PB_assemblyticsfalcon_15008:HG3_PB_assemblyticsfalcon_14992:HG2_PB_pbsv_2823:HG3_PB_pbsv_2803;NumClusterSVs=5;ExactMatchIDs=HG3_PB_assemblyticsfalcon_14992;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0680272;ClusterMaxSizeDiff=0.0680272;ClusterMaxEditDist=0.0972222;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-74;DistBack=-71;DistForward=949;DistMin=-71;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=518;REFWIDENED=2:238455934-238456525;PctSeqSimilarity=0.9952;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=209;EndDistance=209;GTMatch=0;TruScore=66;MatchId=2158.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:19:0|1:8:1:1:4:./.:0:0:0:0:./.:4:0:./.:.:.:.:2300:.
chr2	240739436	HG2_PB_SVrefine2Falcon2Bionano_1248	TCATCTGATCATTCACCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCTGGCATGCTGACCTGGGCCCCATCTGATCACTGTCCGGCATGCTGACCTGAGCCC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_1248:HG4_PB_SVrefine2PBcRDovetail_1514:HG2_PB_pbsv_2861:HG4_PB_pbsv_2869:HG2_PB_SVrefine2PBcRplusDovetail_6241;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1248:HG2_PB_SVrefine2PBcRplusDovetail_6241;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0188679;ClusterMaxSizeDiff=0.0188679;ClusterMaxEditDist=0.0849057;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-105;DistBack=-1;DistForward=-106;DistMin=-106;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=425;REFWIDENED=2:240739437-240739966;PctSeqSimilarity=0.9745;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-136;EndDistance=-136;GTMatch=0;TruScore=65;MatchId=2163.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:21:0|1:28:1:2:19:./.:8:2:14:0:0/0:16:0:./.:.:.:.:.:.
chr3	28773990	HG4_Ill_SVrefine2DISCOVARDovetail_2320	ATAATGGCTTCCAACTCCATCCATGTCCCTGCAAAGTACATGATCTCATTCCTTTTTATGGCTGCATAGTATTTCATAGTATT	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8376:HG3_PB_pbsv_3103:HG4_PB_pbsv_3147:HG4_PB_HySA_4723:HG2_PB_pbsv_3138:HG2_PB_HySA_5898:HG4_PB_SVrefine2PBcRDovetail_1669:HG4_Ill_SVrefine2DISCOVARDovetail_2320:HG3_PB_SVrefine2PBcRDovetail_1563:HG3_PB_SVrefine2Falcon1Dovetail_1952:HG3_Ill_SVrefine2DISCOVARDovetail_2316;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8376:HG4_PB_SVrefine2PBcRDovetail_1669:HG4_Ill_SVrefine2DISCOVARDovetail_2320:HG3_PB_SVrefine2PBcRDovetail_1563:HG3_PB_SVrefine2Falcon1Dovetail_1952:HG3_Ill_SVrefine2DISCOVARDovetail_2316;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0372671;ClusterMaxSizeDiff=0.0368098;ClusterMaxEditDist=0.0745342;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-82;DistBack=48429;DistForward=-71;DistMin=-71;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=240;REFWIDENED=3:28773991-28774312;PctSeqSimilarity=0.989;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-90;EndDistance=-90;GTMatch=0;TruScore=66;MatchId=2480.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:52:35:./.:35:4:9:27:./.:0:0:0:0:0/0:23:1:./.:.:.:.:.:.
chr3	98410705	HG2_PB_SVrefine2PB10Xhap12_2556	CATAGAATTAGCTAAGCTTGTTATTGAAAAAAAAAAAACACAAAAAAAACCTGAATTCTTATAAGAAGTCAGCAAATGGCTACAAAGCTATGATGGATATTCAGATCTATTTATAACCTACAGTTCATCATTGCACTTTCAGTAGACGGTAAGCAATTATTCAGTTTGCATCAGTAGCTATGTTGAGCTTACTCTGACATCCTGTTTTCCACACCTCTTGATCAGGCTTACTGGCATTTTGTTCTTCATAAGTCTTTGTCAGCACTTCCTACAGTTGTCCAACACTATCTAGCACATACAATTAGTCACATTTGTCAACAGTCCTCAGTAAGGTTAGATTAAGTTCAATTTCTCATGGCACCCATATAAAAAGCTCCTGATTTGACTCTCCTATAGCACAATAAATTTCACTAGCCAATAGAAAATTCTGTGAAATATATGTAAATGCATATATATGTGTGTATATATATTTGATTGTGGTACTTCTTGTGGTAGGTTTGGTCTGTATCCTCAAATAGGTGACAATCAGACATTTTTTTTTTTGTTCTAAAGGCATCAAGAAGGCTATACAGAGGCCGGGTGTGGTGGCTAACACCTTTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACTTGAGGTCAAGAATTTGAGACCACCCTGGTCAACATGGCAAAACCCTGTCTCCATAAAAATGCAAAAAGTAGGCGTGGTGGTGCATTCCTATAGACCTCGCTACCCGGGGGGCTGAGGCAGGAGAATCACTTGAACCCAGAAGGCAGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCTGTCTCAAAACAAACAAACAAAAAAGCTATACAGTGTCTATAGGTGTTAGCAGTTAAATGGAATACATGGATAAAAAAGGAAAAATAAGGAGGGAAGCAGTGAAAGAAGGAAGAAAGAACTGTATACATAGGGCAAGGGAAGGGGACAGACAGTGCTGTCACTATTGTCAATTTTGCTGTGACAGAATAAATTCTAGAACAGACTGGGAAACAGCACAGGGCAAATGTTTCTGTCCTGCCAACAGGACTAGCAGAGACTAAGCCAAACTGCTGTCACTGATTGCACCACTGCAGGTTGTCACGGATTACATCACTATGGTTTCTCTTCTCTGAGGACACATTTTTCTCTGCTCTCCACCCAGGGACTTGGACACTTGATTTCAAATTCTCCTAACAAACAGTTTCAGGCTCTTTAGGCCCAGTCTCACTTATTTGCCTACCCGCTTCCAGGACATGCTCCAAAGGGCTTTACCAATATACCCCTCATGTCGAAGACCAGCCCCATCTCTGGCTTCCTCTTCTCCCCATGTCATTCCTGACTATGGCATGGGTGGTTCTGGGAGAAAGGTGACATAAACAGGTTCCCTCTGGACTCAACACAGCAGAGCCAAATGGGAAGTGATGTTGGGAGCTTTCCTTGTGAGGCCAGTCAGTGAAAAGTGCCGACAGTCTGGCAGATGGGAAATCAGTGTTTCCTGAGAGAACAGGAAACACTCACCAAGCTTCTCAGCCTCCTTTTTTTGCCCTCTGCTATAGCTATCTGAAGCTGTCCTAGGGTCAGTGAACAAGAAAGTTCTCCCCAGTCTGTCTGGCCAGACCAAAGTAATATTTTGGATTAAGCTTCATGACATTTCTTTGTCCCATCCTGAAACAACCCTCTGGGAAGGAGAGGGGAATTCATAAATTTACTTTAGTTTGATTTTTGTGACTAAGAAAGTGGTGTTTTACCTTTTCTTCATTCTAGGTTGCTAATGTGCTCACTCTTGGCACCTTGTTAATAATATATAAGATTTATTTACCCCATCTTCATTTACTTATCATCTTTCTCCTGTCTTAAACCCCACACTTGGAGCATATAAATTTACACAGTTTATTTTAAAAGAACAGACTTTGAAGACCTACAGATCTGGTTTTCATACTGGCTCCCACGTGTCTTAGCAGAGTGACATTGGACAAGCTGGTCAACTTCTTTCAATATCACTCAGTTGCTTCATCACCAAAATGAAGGTTATGATGTCTACCTCAGAAGGTTCTTAAGATTTAAGAGAAAGGATGTCCATCAAGTGAAAGGCAAGGAGTGACTGAGTAGAAATATCCATTCCCTTTCCCCTCTCTTTAACCCATCAGCCAAAAGAATATAGCATTTTTTGTTTGTTTGTTTGTTTGTTTTTTAACAAGTTGTGAACCCAGAAAATCTGAGACAGGTCTCAGTTTATTTAGAAAGTTGATTTTGCCAAGATTGAGGACAAGCCTATAACACATCCTCAGGAAGTCCTAATGACAGGTGCCCAAGATGGTCAGGGCACAGCTTGCTTTTATACATTTAGGGAGACAGGAAACATTAATCAATATATGTAAGAAGTACATTGGTTCCGTCTGGAAAGGCGGGACAACTTGAAGCAAAGGCAGGAAGACTGGAAGCGGGGAGACAGCTTCCAGGTCACAGATAAGTGATACACAAATGGTGTACACAAAAAAGGGTGTACACAAATGGTGTACACAAAAAGTGATACACAAACCTACTCTATGAGATATGTGTGTGTGTACATATATATATATTTATCATATATATATGATAGTTAATTTTATGTGTTAACTTGGCTAGGTCACACTGCTCAGATATGTGATCAAACATTATTCTGGATATTTCTGGGTAGGGGGGTATGGATGAAAATAGCATTTAAATTAGTGGACTTTGAGTGCAGCAGCTTGCTCTCCATAATGTGAGTAGACCTCATCCAGTTACTTCAATAGAACAGAACAATAGTTTCCCTAGAGAAGGGAGAATTTTCCAGGAGAAGGCCTTCAGTAGTGAACTGCACCATTAACTCTCCCCTGATCTCCAGCCTGCTGGCCCAACCTGCAGATTTTGGATTTTCCAACCTCCATATTCATGTGAGCCAATTCCTCTATCTATCTATTTATCTATCTCTCTATCTATCTATCTATCTATCATCTATCTATCATCTATCTATCTACATACATATACATGCACATACACATCATGTTGCTTCTGTTTATATATAATTTGTATATAAACATACATATGAAATTTATAAGAAAAGGAAGTAGATGAGTTTAAAGAGAGGTTTACAGCAATGCATTGTCATGGAAAGGAATTTCTGGCCTAATAGAATATGCCATTCTTTAATTATACTAAATAAGGATTCTCCTGTGCTTGCTCAGAATTCACCAGTGCTTATGAAATACTGGTTTGGGGACACTCATTTAGGTTTTGAGTCCAACTGCTCGTTAGAATCCTGGTTCTGCCATTTTCTGGCACTGTGACCTTGGGTAAATGACTTCATCTCTCTCACCCCATTTTTCTCATCTACAAAATGAGGCCATTTATACCTACCCTATGCCTAGGACAGTTGTGAGGACTGAATGAATCCCCAAACTCTCTCAAAAAAAATACTCTAAAAATCCATGTTAGAGGCCGGGCACTGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGACAGCATGGTGAAACCCATCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCGCAGGCCTGTAATTCTGTAATCCCGGTTACTCAGGAGGACGAGGCAGGAGAATCACTTGAACCCTGAGGCAGAGGTTGCAGTGAGCCAAGATCTCGCCACTGCACTCCAGCCTGGGTGACAGAATGAAAAAAAAAAAATCCACATAGAATTAATCTCTCCTTCCAATCCTCTTATAAATCTATAACACTTTGCTCCTAACTTGTGCCTATCATGATGATTATAAAAGTATTTTACATAAAAATTTCCCCCTGCTTACTCAGTCAATAAGATTCCATCAGAAATGTATGAAATAAGAATTTCCCAGCTCCCTTCTACTCCCACTTACCAAAGAAGCAGAAATTCTATCAAATATCAGGAATAATTTTTTTTAATGCAAATTCCTCTTTGAAACCCTTTGACCCTCAGGAGATTTAAATTCTATGAGGTG	AAAAAAAA	20	PASS	ClusterIDs=HG3_Ill_MetaSV_3458:HG2_PB_pbsv_3496:HG3_PB_pbsv_3431:HG4_PB_pbsv_3504:HG4_Ill_SVrefine2DISCOVARDovetail_2645:HG2_PB_SVrefine2PBcRplusDovetail_7500:HG2_PB_SVrefine2PB10Xhap12_2556:HG2_PB_SVrefine2Falcon2Bionano_1606:HG4_PB_SVrefine2PBcRDovetail_1811:HG2_PB_SVrefine2Falcon1plusDovetail_8108:HG2_PB_assemblyticsPBcR_17322:HG2_PB_assemblyticsfalcon_17950:HG3_PB_HySA_5411:HG3_10X_allpass_667:HG2_PB_HySA_6619:HG2_10X_allpass_533:HG2_10X_SVrefine210Xhap12_2597:HG4_10X_allpass_626;NumClusterSVs=18;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1606:HG2_PB_SVrefine2PB10Xhap12_2556:HG2_PB_SVrefine2PBcRplusDovetail_7500;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0296657;ClusterMaxSizeDiff=0.0296657;ClusterMaxEditDist=0.0296657;PBcalls=12;Illcalls=2;TenXcalls=4;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=4;NumTechs=3;NumTechsExact=1;SVLEN=-4071;DistBack=-4079;DistForward=8171;DistMin=-4079;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=3:98410705-98414783;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2550.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:65:./.:0:4:0:1:./.:0:0:0:0:./.:0:2:0/1:20:138:.:.:.
chr3	178749729	HG2_Ill_svaba_4927	CCCTCCCCCTCCCCCTCCCCCTCCTCCTCCCCCTCCCCCTCCTCCTCCCCCTCCTCCTCCCCCTCCCCCTCCT	C	10	PASS	ClusterIDs=HG2_Ill_svaba_4927:HG4_Ill_svaba_5042:HG3_Ill_svaba_5018:HG2_Ill_svaba_4928:HG4_Ill_svaba_5041:HG3_Ill_svaba_5017;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_svaba_4927:HG4_Ill_svaba_5041:HG3_Ill_svaba_5017;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0857143;ClusterMaxSizeDiff=0.0857143;ClusterMaxEditDist=0.0857143;PBcalls=0;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-72;DistBack=8230;DistForward=-43;DistMin=-43;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=34;REFWIDENED=3:178749713-178749818;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2634.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:51:./.:3:16:14:19:./.:0:0:0:0:./.:1:0:./.:.:.:.:.:.
chr3	183675524	HG2_PB_SVrefine2Falcon2Bionano_1844	GGTTACATGCGGATCCGTGTGTATATCACATCGGTTACACGTAAATCCGTGTGTATATCACATCGGTTACACGCAGATCCGTGTGTATATCACATCTGTTACATGCGGATCCGTGTGTATATCACATCTGTTACATGCGGATCCGTGTGTATATCACATCG	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_2865:HG4_PB_SVrefine2PBcRDovetail_2021:HG4_PB_SVrefine2Falcon1Dovetail_2382:HG4_PB_assemblyticsfalcon_18191:HG2_PB_SVrefine2Falcon2Bionano_1844;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_1844:HG4_PB_SVrefine2PBcRDovetail_2021;NumExactMatchSVs=2;ClusterMaxShiftDist=0.180791;ClusterMaxSizeDiff=0.180791;ClusterMaxEditDist=0.355932;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-160;DistBack=8;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=2154;REFWIDENED=3:183673409-183675722;PctSeqSimilarity=0.9459;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=341;EndDistance=341;GTMatch=0;TruScore=64;MatchId=2640.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:51:27:./.:35:2:9:22:./.:0:0:0:0:0/0:42:1:./.:.:.:.:.:.
chr3	194830065	HG4_PB_SVrefine2PBcRDovetail_2069	CGTGTGTGTGCGTGTATGGTGTGTCTGTGTGTGGCATGTGTGTAGTGTATAAGTGTGCATGTATGTGTGCATGTGTATGGTGTGTGTGTTGGTGGTGTATGAGTGTGTGGTATATGTGTGCGTGTATGTGGTATATGTGTGCATGTGTGTGTGAGGTATGTGTACGTGTGTGGTGTATGAGTGTGCATGTGTGTGGTGTACATGTGTAGGGGGTGTGTGTGTGCATGGTGTGTGTGGTTGTGTGGCATATGAGTGCACGTGTGTGTGGTGTGTGTTGTATGAGTGTGTGTGGTGTCTGTGTGGTGTGTGTGGTGTATGTGTGCGTGTGTGTG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9130:HG4_PB_SVrefine2PBcRDovetail_2069:HG4_Ill_SVrefine2DISCOVARDovetail_3106:HG3_PB_SVrefine2PBcRDovetail_1876:HG3_Ill_SVrefine2DISCOVARDovetail_3122:HG2_PB_SVrefine2PBcRplusDovetail_7815:HG2_PB_SVrefine2PB10Xhap12_2937:HG2_PB_SVrefine2Falcon1plusDovetail_8422;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9130:HG4_PB_SVrefine2PBcRDovetail_2069:HG4_Ill_SVrefine2DISCOVARDovetail_3106:HG3_PB_SVrefine2PBcRDovetail_1876:HG3_Ill_SVrefine2DISCOVARDovetail_3122:HG2_PB_SVrefine2PBcRplusDovetail_7815:HG2_PB_SVrefine2PB10Xhap12_2937:HG2_PB_SVrefine2Falcon1plusDovetail_8422;NumExactMatchSVs=8;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-331;DistBack=1689;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=706;REFWIDENED=3:194830066-194831102;PctSeqSimilarity=0.8718;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-506;EndDistance=-506;GTMatch=1;TruScore=62;MatchId=2672.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:55:./.:6:22:13:27:./.:0:0:0:0:0/0:52:0:0/0:101:1:.:.:.
chr3	195607839	HG3_PB_HySA_6214	GTAACACCCGCCCCCAGCGATGCCCCTTGGAGAGGACACAGTGTCTATCCCTCTAACACCACCCGCCAGCAATGCCCCTTGAAGAGGACACAGGATCTGTCCCTC	G	20	PASS	ClusterIDs=HG2_Ill_breakscan11_540:HG4_PB_pbsv_4044:HG4_PB_HySA_6035:HG3_PB_HySA_6214:HG3_PB_HySA_6213;NumClusterSVs=5;ExactMatchIDs=HG3_PB_HySA_6214:HG4_PB_HySA_6035;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0291262;ClusterMaxSizeDiff=0.0289855;ClusterMaxEditDist=0.194175;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-104;DistBack=5546;DistForward=-71;DistMin=-71;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1067;REFWIDENED=3:195607246-195608416;PctSeqSimilarity=0.6788;PctSizeSimilarity=0.4904;PctRecOverlap=0.4476;SizeDiff=53;StartDistance=-58;EndDistance=-5;GTMatch=0;TruScore=53;MatchId=2677.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:19:./.:24:4:7:14:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr3	196554680	HG2_PB_assemblyticsfalcon_18783	GCAGTTTGTGCATCGTATCAATCCTCAGACCTGTTTACAGTTTGTGCATCGTATCAATCCTCAGACCTGTTT	C	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_18783:HG4_PB_assemblyticsfalcon_18372:HG2_PB_assemblyticsPBcR_18170:HG2_PB_pbsv_4032:HG3_PB_pbsv_3928;NumClusterSVs=5;ExactMatchIDs=HG2_PB_assemblyticsfalcon_18783;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0138889;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0555556;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-71;DistBack=16430;DistForward=-16;DistMin=-16;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=217;REFWIDENED=3:196554680-196554968;PctSeqSimilarity=0.9926;PctSizeSimilarity=0.9861;PctRecOverlap=0;SizeDiff=-1;StartDistance=-200;EndDistance=-201;GTMatch=0;TruScore=65;MatchId=2681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:46:0|1:23:2:5:42:./.:0:0:0:0:./.:46:4:./.:.:.:.:.:.
chr3	197603671	HG3_PB_SVrefine2PBcRDovetail_1903	TCCATGACAGTGATTCTCTTTACCCAACTCACCGCACCCATGGCAGTGATTCTCTTTACCCAACTCACCGCACCCATGACAGTGATTCTCTTTACCCAACTCACCGCAC	T	10	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_1903:HG2_PB_pbsv_4054:HG2_PB_SVrefine2Falcon2Bionano_1942:HG4_PB_pbsv_4079:HG3_PB_pbsv_3951:HG4_PB_SVrefine2Falcon1Dovetail_2486;NumClusterSVs=6;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_1903:HG4_PB_SVrefine2Falcon1Dovetail_2486;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0275229;ClusterMaxSizeDiff=0.0275229;ClusterMaxEditDist=0.0733945;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-108;DistBack=6062;DistForward=-109;DistMin=-109;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=685;REFWIDENED=3:197603672-197604464;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9907;PctRecOverlap=0;SizeDiff=1;StartDistance=-532;EndDistance=-531;GTMatch=0;TruScore=66;MatchId=2688.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:24:./.:15:3:10:8:./.:0:0:0:0:0/0:10:0:./.:.:.:.:.:.
chr4	897856	HG2_Ill_SVrefine2DISCOVARplusDovetail_9172	ATCCTAACTGAGCGGGAGCCCCCCACAGAGGCTGTGAACCGCGTGTGGAGGGAGCCACTACCTTGTGGTCCCTGTGGATGATGGGCGGC	A	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9172:HG2_PB_pbsv_4081:HG3_PB_pbsv_3976:HG4_PB_SVrefine2PBcRDovetail_2105:HG4_Ill_SVrefine2DISCOVARDovetail_3152:HG3_Ill_SVrefine2DISCOVARDovetail_3161:HG2_PB_SVrefine2Falcon2Bionano_1956;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9172:HG4_PB_SVrefine2PBcRDovetail_2105:HG4_Ill_SVrefine2DISCOVARDovetail_3152:HG3_Ill_SVrefine2DISCOVARDovetail_3161:HG2_PB_SVrefine2Falcon2Bionano_1956;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0224719;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.179775;PBcalls=4;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-88;DistBack=462;DistForward=39;DistMin=39;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=461;REFWIDENED=4:897857-898405;PctSeqSimilarity=0.9533;PctSizeSimilarity=0.9778;PctRecOverlap=0;SizeDiff=-2;StartDistance=-148;EndDistance=-150;GTMatch=0;TruScore=64;MatchId=2692.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:21:0|1:23:5:4:13:./.:0:0:0:0:0/0:40:0:./.:.:.:.:.:.
chr4	993364	HG4_PB_SVrefine2Falcon1Dovetail_2503	TTCCCTGACGACGCCTGTCCCCTCGGAATGCAGGCCTCGTGGGAATTCAGCCCATCCGCAAGTGCAGTGGCAGGGCGGCCCCCTTCCCCCTTGACGACGCCTGTCCCCTTGGAATGCAGGCCTCGTGGGAATTCAGCCCATCTGCAAGTGCAGTGGCAGGGCGGCCCCCTTC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9174:HG4_PB_HySA_6123:HG2_PB_HySA_7687:HG3_Ill_250bpfermikitraw_5494:HG2_Ill_250bpfermikitraw_5677:HG2_Ill_150bpfermikitraw_5254:HG4_PB_pbsv_4115:HG3_PB_pbsv_3981:HG2_PB_pbsv_4087:HG4_PB_SVrefine2PBcRDovetail_2107:HG4_PB_SVrefine2Falcon1Dovetail_2503:HG4_Ill_SVrefine2DISCOVARDovetail_3153:HG3_PB_SVrefine2PBcRDovetail_1912:HG3_PB_SVrefine2Falcon1Dovetail_2574:HG3_Ill_SVrefine2DISCOVARDovetail_3162:HG2_PB_SVrefine2PBcRplusDovetail_7879:HG2_PB_SVrefine2PB10Xhap12_3009:HG2_PB_SVrefine2Falcon2Bionano_1959:HG2_PB_SVrefine2Falcon1plusDovetail_8487;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9174:HG4_PB_SVrefine2PBcRDovetail_2107:HG4_PB_SVrefine2Falcon1Dovetail_2503:HG4_Ill_SVrefine2DISCOVARDovetail_3153:HG3_PB_SVrefine2PBcRDovetail_1912:HG3_PB_SVrefine2Falcon1Dovetail_2574:HG3_Ill_SVrefine2DISCOVARDovetail_3162:HG2_PB_SVrefine2PBcRplusDovetail_7879:HG2_PB_SVrefine2PB10Xhap12_3009:HG2_PB_SVrefine2Falcon2Bionano_1959:HG2_PB_SVrefine2Falcon1plusDovetail_8487;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0172911;ClusterMaxSizeDiff=0.0172911;ClusterMaxEditDist=0.0691643;PBcalls=13;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=5;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-171;DistBack=23828;DistForward=-172;DistMin=-172;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=86;REFWIDENED=4:993365-993621;PctSeqSimilarity=0.9795;PctSizeSimilarity=0.9884;PctRecOverlap=0;SizeDiff=-2;StartDistance=-266;EndDistance=-268;GTMatch=0;TruScore=65;MatchId=2693.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:56:1/1:5:19:4:26:./.:0:0:0:0:0/0:34:0:./.:.:.:.:.:.
chr4	3513700	HG2_PB_assemblyticsfalcon_18922	GGCTCAGACACGGGAAGGGAACCACGCTCGGAGCCGGACCCGAGCCTCTTCC	G	20	PASS	ClusterIDs=HG4_PB_HySA_6215:HG4_PB_assemblyticsfalcon_18533:HG3_PB_pbsv_4053:HG4_Ill_GATKHCSBGrefine_2883:HG2_Ill_GATKHCSBGrefine_2760:HG3_PB_assemblyticsfalcon_18840:HG2_PB_assemblyticsfalcon_18922:HG4_Ill_GATKHCSBGrefine_2882:HG2_Ill_GATKHCSBGrefine_2759:HG4_PB_pbsv_4191:HG2_PB_assemblyticsfalcon_18921:HG2_PB_assemblyticsPBcR_18301:HG2_PB_pbsv_4162:HG3_PB_HySA_6376:HG3_Ill_150bpfermikitraw_5362;NumClusterSVs=15;ExactMatchIDs=HG2_PB_assemblyticsfalcon_18922:HG3_PB_assemblyticsfalcon_18840;NumExactMatchSVs=2;ClusterMaxShiftDist=0.113208;ClusterMaxSizeDiff=0.113208;ClusterMaxEditDist=0.153846;PBcalls=10;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=4;HG4count=5;NumTechs=2;NumTechsExact=1;SVLEN=-51;DistBack=126;DistForward=4346;DistMin=126;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=397;REFWIDENED=4:3513427-3513874;PctSeqSimilarity=0.9923;PctSizeSimilarity=0.9623;PctRecOverlap=0;SizeDiff=-2;StartDistance=130;EndDistance=128;GTMatch=0;TruScore=65;MatchId=2705.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:57:1/1:3:23:3:26:./.:0:0:0:0:0/0:18:0:./.:.:.:.:.:.
chr4	16325017	HG2_Ill_SVrefine2DISCOVARplusDovetail_9277	GATCCTAGTTGTGCAGTAGATCAGTATAAATTGAAGCCCCAGTCTACCTTCACCACCTCCTCTCTACCACTCAGCTTGTCATGACCTGCTCAGCAAATAGCTCCACAATTCCTATTTCTCC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9277:HG4_PB_pbsv_4317:HG2_PB_PB10Xdip_21655:HG2_PB_PB10Xdip_21654:HG3_PB_pbsv_4185:HG2_PB_pbsv_4293:HG4_PB_SVrefine2PBcRDovetail_2193:HG4_PB_SVrefine2Falcon1Dovetail_2629:HG4_Ill_SVrefine2DISCOVARDovetail_3248:HG3_PB_SVrefine2Falcon1Dovetail_2701:HG3_Ill_SVrefine2DISCOVARDovetail_3252:HG2_PB_SVrefine2PBcRplusDovetail_8001:HG2_PB_SVrefine2PB10Xhap12_3160:HG2_PB_SVrefine2Falcon2Bionano_2060:HG2_PB_SVrefine2Falcon1plusDovetail_8619;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_9277:HG4_PB_SVrefine2PBcRDovetail_2193:HG4_PB_SVrefine2Falcon1Dovetail_2629:HG4_Ill_SVrefine2DISCOVARDovetail_3248:HG3_PB_SVrefine2Falcon1Dovetail_2701:HG3_Ill_SVrefine2DISCOVARDovetail_3252:HG2_PB_SVrefine2PBcRplusDovetail_8001:HG2_PB_SVrefine2PB10Xhap12_3160:HG2_PB_SVrefine2Falcon2Bionano_2060:HG2_PB_SVrefine2Falcon1plusDovetail_8619;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0248963;ClusterMaxSizeDiff=0.0166667;ClusterMaxEditDist=0.0336134;PBcalls=12;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=3;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-120;DistBack=0;DistForward=-121;DistMin=-121;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=233;REFWIDENED=4:16325018-16325370;PctSeqSimilarity=0.9975;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-202;EndDistance=-202;GTMatch=0;TruScore=66;MatchId=2728.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:1:52:1/1:0:18:1:23:./.:0:0:0:0:./.:2:4:./.:.:.:.:.:.
chr4	17460790	HG2_PB_SVrefine2Falcon1plusDovetail_8623	TTTATATATACATATGTATTATATATGTACAGATTATGTATACATATGTATTATATATGCACAGGTTATGTATACATATGTATTATATACGCACAGCTTATGTATACATATGTATTCTATACGCACAGCTTATGTATACATATGTATTATATACGCACAGC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_2706:HG2_PB_pbsv_4302:HG3_PB_pbsv_4194:HG2_PB_pbsv_4303:HG3_PB_pbsv_4193:HG3_Ill_SVrefine2DISCOVARDovetail_3259:HG2_PB_SVrefine2PBcRplusDovetail_8004:HG2_PB_SVrefine2Falcon1plusDovetail_8623;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8623:HG2_PB_SVrefine2PBcRplusDovetail_8004:HG3_Ill_SVrefine2DISCOVARDovetail_3259;NumExactMatchSVs=3;ClusterMaxShiftDist=0.19209;ClusterMaxSizeDiff=0.19209;ClusterMaxEditDist=0.237288;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-160;DistBack=9766;DistForward=-65;DistMin=-65;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=689;REFWIDENED=4:17460791-17461639;PctSeqSimilarity=0.9828;PctSizeSimilarity=0.9938;PctRecOverlap=0;SizeDiff=1;StartDistance=-320;EndDistance=-319;GTMatch=0;TruScore=65;MatchId=2734.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:49:./.:4:39:15:6:./.:0:0:0:0:./.:14:1:./.:.:.:.:.:.
chr4	86396781	HG4_Ill_SVrefine2DISCOVARDovetail_3573	AGGGGAGGGGGCTGCGGGGGGCGGGGAGGGGGCTGCGGGGGGCGGGGAGGGGGCTGCGGGGGGC	A	20	PASS	ClusterIDs=HG2_Ill_svaba_5972:HG4_PB_assemblyticsfalcon_19280:HG4_PB_pbsv_4701:HG4_Ill_svaba_6092:HG4_Ill_SVrefine2DISCOVARDovetail_3573:HG4_Ill_Krunchall_6900:HG4_Ill_GATKHC_7872:HG4_Ill_GATKHCSBGrefine_3295:HG4_Ill_250bpfermikitraw_6572:HG4_Ill_150bpfermikitraw_6278:HG3_Ill_svaba_6090;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_svaba_5972:HG4_Ill_svaba_6092:HG4_Ill_SVrefine2DISCOVARDovetail_3573:HG4_Ill_Krunchall_6900:HG4_Ill_GATKHC_7872:HG4_Ill_GATKHCSBGrefine_3295:HG4_Ill_250bpfermikitraw_6572:HG4_Ill_150bpfermikitraw_6278:HG3_Ill_svaba_6090;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0155039;ClusterMaxSizeDiff=0.0155039;ClusterMaxEditDist=0.0310078;PBcalls=2;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=9;NumTechs=2;NumTechsExact=1;SVLEN=-63;DistBack=-22;DistForward=10;DistMin=-22;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=50;REFWIDENED=4:86396782-86396894;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2836.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:57:20:./.:25:9:20:8:./.:0:0:0:0:./.:5:1:./.:.:.:.:.:.
chr4	123733539	HG2_PB_SVrefine2PBcRplusDovetail_8330	GGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCTCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCA	G	20	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_20009:HG2_PB_SVrefine2Falcon1plusDovetail_8959:HG4_PB_SVrefine2PBcRDovetail_2470:HG4_PB_SVrefine2Falcon1Dovetail_2976:HG4_Ill_GATKHC_8190:HG4_Ill_GATKHCSBGrefine_3426:HG2_PB_SVrefine2PBcRplusDovetail_8330:HG2_Ill_GATKHCSBGrefine_3285:HG4_PB_assemblyticsfalcon_19544:HG2_PB_assemblyticsPBcR_19357:HG2_PB_pbsv_4850:HG4_PB_pbsv_4883;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_3285:HG2_PB_SVrefine2PBcRplusDovetail_8330:HG4_Ill_GATKHCSBGrefine_3426:HG4_Ill_GATKHC_8190:HG4_PB_SVrefine2Falcon1Dovetail_2976;NumExactMatchSVs=5;ClusterMaxShiftDist=0.202703;ClusterMaxSizeDiff=0.202703;ClusterMaxEditDist=0.255034;PBcalls=9;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=2;SVLEN=-127;DistBack=19;DistForward=32070;DistMin=19;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=968;REFWIDENED=4:123732752-123733846;PctSeqSimilarity=0.8873;PctSizeSimilarity=0.7937;PctRecOverlap=0;SizeDiff=-33;StartDistance=193;EndDistance=160;GTMatch=0;TruScore=56;MatchId=2909.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:47:24:0|1:41:1:3:22:./.:0:0:0:0:0/1:12:7:./.:.:.:.:.:.
chr4	135510631	HG2_PB_SVrefine2Falcon1plusDovetail_8995	GTGTATATGTGTGTGTATATATATTATATATACACATATATATGTATATGTGTGTATATATAATATATACACACATATATATGTATATGTGTGTATATATTATATATACACATACATATGTATATGTGTGTGTATATATTATATATACACATACATATGTATATGTGTGTGTATATATTATATATACACATACATATGTATATGTGTGTGTATATATTATATATACACATACATATGTATATGTGTGTATCTATATAATATATACACATACATATGTATATGTGTGTGTATCTATATAATATATACACATACATATGTATATGTGTGTGTATCTATATTATATATACACATACATA	G	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_3039:HG3_PB_pbsv_4775:HG2_PB_SVrefine2PB10Xhap12_3581:HG4_PB_pbsv_4941:HG2_PB_pbsv_4907:HG3_PB_SVrefine2PBcRDovetail_2237:HG4_PB_SVrefine2PBcRDovetail_2505:HG2_PB_SVrefine2PBcRplusDovetail_8364:HG2_PB_SVrefine2Falcon2Bionano_2364:HG2_PB_SVrefine2Falcon1plusDovetail_8995:HG4_PB_SVrefine2Falcon1Dovetail_3014;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_8995:HG2_PB_SVrefine2Falcon2Bionano_2364:HG2_PB_SVrefine2PBcRplusDovetail_8364:HG3_PB_SVrefine2PBcRDovetail_2237;NumExactMatchSVs=4;ClusterMaxShiftDist=0.239774;ClusterMaxSizeDiff=0.239774;ClusterMaxEditDist=0.277108;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-355;DistBack=21476;DistForward=-356;DistMin=-356;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1203;REFWIDENED=4:135510632-135512189;PctSeqSimilarity=0.9279;PctSizeSimilarity=0.8901;PctRecOverlap=0;SizeDiff=39;StartDistance=-379;EndDistance=-340;GTMatch=0;TruScore=60;MatchId=2926.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:16:60:1/1:4:13:7:22:./.:0:0:0:0:0/0:52:0:0/0:49:1:.:.:.
chr4	139660352	HG2_10X_SVrefine210Xhap12_3616	GCCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGCCCGGCTGCCCCGTCTGAGAAGTGAGGAGCC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3616:HG3_Ill_SVrefine2DISCOVARDovetail_3825;NumClusterSVs=2;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3616:HG3_Ill_SVrefine2DISCOVARDovetail_3825;NumExactMatchSVs=2;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-77;DistBack=98548;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=224;REFWIDENED=4:139660353-139660653;PctSeqSimilarity=0.8086;PctSizeSimilarity=0.5195;PctRecOverlap=0;SizeDiff=37;StartDistance=-122;EndDistance=-85;GTMatch=0;TruScore=44;MatchId=2934.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:30:./.:30:1:11:27:./.:0:0:0:0:0/0:32:0:./.:.:.:.:.:.
chr4	148271689	HG3_Ill_scalpel_5016	AAAAGAAAGAAGAAAGAGAAAGAAAGAAAGAAGGAAGGAAAGAAAGAAGGAAGAAAGAGAAAG	A	20	PASS	ClusterIDs=HG2_Ill_GATKHC_8361:HG2_PB_pbsv_4967:HG4_Ill_scalpel_4842:HG3_Ill_scalpel_5016:HG3_Ill_GATKHCSBGrefine_3371:HG2_Ill_scalpel_4930:HG2_Ill_manta_1408:HG2_Ill_SpiralSDKrefine_12798;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_8361:HG4_Ill_scalpel_4842:HG3_Ill_scalpel_5016:HG3_Ill_GATKHCSBGrefine_3371:HG2_Ill_scalpel_4930:HG2_Ill_manta_1408:HG2_Ill_SpiralSDKrefine_12798;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0322581;ClusterMaxSizeDiff=0.0322581;ClusterMaxEditDist=0.0322581;PBcalls=1;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=1035;DistForward=30;DistMin=30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=51;REFWIDENED=4:148271688-148271803;PctSeqSimilarity=0.931;PctSizeSimilarity=0.8387;PctRecOverlap=0;SizeDiff=10;StartDistance=-91;EndDistance=-81;GTMatch=0;TruScore=58;MatchId=2947.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:9:32:1/1:4:16:1:9:./.:0:0:0:0:1/1:0:13:./.:.:.:.:.:.
chr4	157680435	HG3_PB_SVrefine2Falcon1Dovetail_3102	AGTCAATGCACCTGGAGACAGGGATGCACCGAGGGTAACCAAACCATAGTCAATGCACCTGGAGACAGGGATACACCGAGGGTAACCAAACCATAGTCAATGCACCTGGAGACAGGGATGCACCGAGGGTAACCAAACCACGTTCAATGCGCCTGGAGACAGGGATGCACCGAGGGTAACCAAACCACG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9056:HG2_PB_pbsv_5025:HG3_PB_pbsv_4882:HG4_PB_SVrefine2Falcon1Dovetail_3063:HG3_PB_SVrefine2PBcRDovetail_2292:HG3_PB_SVrefine2Falcon1Dovetail_3102:HG2_PB_SVrefine2PBcRplusDovetail_8422:HG2_PB_SVrefine2PB10Xhap12_3654;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9056:HG4_PB_SVrefine2Falcon1Dovetail_3063:HG3_PB_SVrefine2PBcRDovetail_2292:HG3_PB_SVrefine2Falcon1Dovetail_3102:HG2_PB_SVrefine2PBcRplusDovetail_8422:HG2_PB_SVrefine2PB10Xhap12_3654;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0106101;ClusterMaxSizeDiff=0.00530504;ClusterMaxEditDist=0.0954907;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-188;DistBack=9529;DistForward=-189;DistMin=-189;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=834;REFWIDENED=4:157680436-157681457;PctSeqSimilarity=0.9718;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-372;EndDistance=-372;GTMatch=0;TruScore=65;MatchId=2963.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:40:0|1:29:3:2:35:./.:0:0:0:0:0/0:16:0:./.:.:.:.:.:.
chr4	184303362	HG2_PB_SVrefine2PBcRplusDovetail_8526	TCTAACACAGCACTTTTTTTTTTTAATTTTTTTATTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTAGAGTGCAGTGGTGCGATCTTGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGGGTAGCTGGGATTACAGGCACCCATCACCATGGCTGACTAATTTTTGTATTTTTAGCAGAGACGGGGTTCCACCATCTTGGCCAGGCTGGTCTCAAACTCCTCACCTCATGATCCATATGACTCCGCCTCCCAAACTGCTAGGATTATAGGCATGAGCCACCACACCCGGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_3816:HG3_PB_HySA_8073:HG2_PB_pbsv_5201:HG4_PB_pbsv_5232:HG4_PB_HySA_7838:HG4_Ill_GATKHCSBGrefine_3734:HG3_Ill_GATKHCSBGrefine_3552:HG2_Ill_GATKHCSBGrefine_3581:HG4_Ill_manta_1314:HG3_Ill_manta_1229:HG2_Ill_manta_1495:HG2_Ill_SpiralSDKrefine_13042:HG2_Ill_MetaSV_3816:HG4_Ill_scalpel_5086:HG4_10X_allpass_1008:HG3_Ill_scalpel_5289:HG3_10X_allpass_1056:HG2_Ill_scalpel_5177:HG2_10X_allpass_853:HG3_PB_pbsv_5066:HG2_Ill_tnscope_586:HG4_PB_SVrefine2PBcRDovetail_2661:HG4_PB_SVrefine2Falcon1Dovetail_3176:HG4_Ill_SVrefine2DISCOVARDovetail_3984:HG3_PB_SVrefine2PBcRDovetail_2409:HG3_PB_SVrefine2Falcon1Dovetail_3217:HG3_Ill_SVrefine2DISCOVARDovetail_4069:HG2_PB_SVrefine2PBcRplusDovetail_8526:HG2_PB_SVrefine2PB10Xhap12_3773:HG2_PB_SVrefine2Falcon2Bionano_2542:HG2_PB_SVrefine2Falcon1plusDovetail_9169:HG2_Ill_SVrefine2DISCOVARplusDovetail_10012;NumClusterSVs=32;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_3816:HG4_PB_SVrefine2PBcRDovetail_2661:HG4_PB_SVrefine2Falcon1Dovetail_3176:HG4_Ill_SVrefine2DISCOVARDovetail_3984:HG3_PB_SVrefine2PBcRDovetail_2409:HG3_PB_SVrefine2Falcon1Dovetail_3217:HG3_Ill_SVrefine2DISCOVARDovetail_4069:HG2_PB_SVrefine2PBcRplusDovetail_8526:HG2_PB_SVrefine2PB10Xhap12_3773:HG2_PB_SVrefine2Falcon2Bionano_2542:HG2_PB_SVrefine2Falcon1plusDovetail_9169:HG2_Ill_SVrefine2DISCOVARplusDovetail_10012;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0123457;ClusterMaxSizeDiff=0.0123457;ClusterMaxEditDist=0.170543;PBcalls=13;Illcalls=15;TenXcalls=4;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=14;HG3count=9;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-322;DistBack=22153;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=342;REFWIDENED=4:184303363-184304026;PctSeqSimilarity=0.9186;PctSizeSimilarity=0.9969;PctRecOverlap=0;SizeDiff=-1;StartDistance=-324;EndDistance=-325;GTMatch=0;TruScore=63;MatchId=3004.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:71:1/1:0:42:2:23:./.:0:0:0:0:0/0:52:0:0/0:46:3:.:.:.
chr4	188225552	HG4_PB_SVrefine2Falcon1Dovetail_3211	ATCTCTGCCTCCGCCTCCTCCTCTGGGTGGCCCTGTCTCTGCCTCCGTCTCCTCCTCTGGGTGGCCCTGTCTCTGCCTCCGTCTCCTCCTCTGGGTGGCCCTGTCTCTGCCTCCGTCTCCTCCTCTGGGTGGCCCTGTCTCTGCCTCCGTCTCCTCCTCTGGGTGGCCCTGCCTCTGCCTCCGTCTCCTCCTCTGGGTGGCCCTGCCTCTGCCTCCGTCTCCTCCTCTGGGTGGCCCTGCCTCTGCCTCCGTCTCCTCCTCTGGGTGGCCCTG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9211:HG3_PB_pbsv_5128:HG2_PB_SVrefine2PBcRplusDovetail_8564:HG2_PB_SVrefine2PB10Xhap12_3815:HG4_PB_SVrefine2Falcon1Dovetail_3211:HG3_PB_SVrefine2PBcRDovetail_2443:HG3_PB_SVrefine2Falcon1Dovetail_3255:HG2_PB_pbsv_5268:HG2_PB_SVrefine2PB10Xhap12_3814:HG2_PB_SVrefine2Falcon2Bionano_2577;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9211:HG4_PB_SVrefine2Falcon1Dovetail_3211:HG3_PB_SVrefine2PBcRDovetail_2443:HG3_PB_SVrefine2Falcon1Dovetail_3255:HG2_PB_pbsv_5268:HG2_PB_SVrefine2PB10Xhap12_3814:HG2_PB_SVrefine2Falcon2Bionano_2577;NumExactMatchSVs=7;ClusterMaxShiftDist=0.284519;ClusterMaxSizeDiff=0.284519;ClusterMaxEditDist=0.284519;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-272;DistBack=4524;DistForward=-273;DistMin=-273;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=479;REFWIDENED=4:188225553-188226303;PctSeqSimilarity=0.3289;PctSizeSimilarity=0.25;PctRecOverlap=0.2527;SizeDiff=204;StartDistance=-137;EndDistance=67;GTMatch=1;TruScore=27;MatchId=3023.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:37:./.:10:6:5:27:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr5	402397	HG2_PB_SVrefine2PBcRplusDovetail_8652	TGGAAGGCAGTCGTTGATGAGGGTGTGGAGAGAAGGGGACCCTCGTGCACTGTTGGCG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10075:HG2_PB_pbsv_5409:HG4_PB_pbsv_5427:HG2_PB_PB10Xdip_23756:HG4_PB_SVrefine2Falcon1Dovetail_3281:HG4_Ill_SVrefine2DISCOVARDovetail_4045:HG3_PB_SVrefine2Falcon1Dovetail_3339:HG2_PB_SVrefine2PBcRplusDovetail_8652:HG2_PB_SVrefine2PB10Xhap12_3895:HG2_PB_SVrefine2Falcon2Bionano_2648:HG2_PB_SVrefine2Falcon1plusDovetail_9294;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10075:HG4_PB_SVrefine2Falcon1Dovetail_3281:HG4_Ill_SVrefine2DISCOVARDovetail_4045:HG3_PB_SVrefine2Falcon1Dovetail_3339:HG2_PB_SVrefine2PBcRplusDovetail_8652:HG2_PB_SVrefine2PB10Xhap12_3895:HG2_PB_SVrefine2Falcon2Bionano_2648:HG2_PB_SVrefine2Falcon1plusDovetail_9294;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0884956;ClusterMaxSizeDiff=0.0869565;ClusterMaxEditDist=0.123894;PBcalls=9;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-57;DistBack=7996;DistForward=-58;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=234;REFWIDENED=5:402398-402688;PctSeqSimilarity=0.9932;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-73;EndDistance=-73;GTMatch=0;TruScore=66;MatchId=3040.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:37:1|0:8:28:31:4:./.:0:0:0:0:./.:5:1:./.:.:.:.:1354:.
chr5	897227	HG2_PB_SVrefine2Falcon1plusDovetail_9327	TGATGGGCTCTAGCAGGCCAAGCCCACGGCTTCATTCAGTCAGTGTGTGGGGAAACAGGTGGATTTGGATGGGCTCTAGCAGGCCAAGCCCAGGGCTTCATTCAGTCAGTGTGTGGGGAAACAGGTGGATTTGGATGGGCTCTAGCAGGCCAAGCCCAGGGCTTCATTCAGTCAGTGTGTGGGGAAACAGGTGGATTTGGATGGGCTCTAGCAGGCCAAGCCCAGGGCTTCATTCATTCAGTGTGTGGGGAAACAGGTGGATTTGGATGGGCTCTGGCAGGCCAAGCCCAGGGCTTCATTCAGTCAGTGTGTGGGGAAACAGGTGGATTTGGATGGGCTCTGGCAGGCCAAGCCCAGGGCTTCATGCAGTCAGTGTGTGGGGAAACAGGTGGATTTGGATGGGCTCTGGCAGGCCAAGCCCAGGGCTTCATTCAGTCAGTGTGTGGGGAAACAGGTGGATTTG	T	10	PASS	ClusterIDs=HG4_PB_pbsv_5473:HG4_PB_pbsv_5474:HG2_PB_pbsv_5451:HG3_PB_pbsv_5295:HG4_PB_SVrefine2Falcon1Dovetail_3315:HG3_PB_SVrefine2Falcon1Dovetail_3372:HG2_PB_SVrefine2PBcRplusDovetail_8678:HG2_PB_SVrefine2PB10Xhap12_3934:HG2_PB_SVrefine2Falcon1plusDovetail_9327;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9327:HG2_PB_SVrefine2PB10Xhap12_3934:HG2_PB_SVrefine2PBcRplusDovetail_8678:HG3_PB_SVrefine2Falcon1Dovetail_3372:HG4_PB_SVrefine2Falcon1Dovetail_3315;NumExactMatchSVs=5;ClusterMaxShiftDist=0.004329;ClusterMaxSizeDiff=0.004329;ClusterMaxEditDist=0.0195016;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-462;DistBack=14475;DistForward=-463;DistMin=-463;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1288;REFWIDENED=5:897228-898977;PctSeqSimilarity=0.9953;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-1289;EndDistance=-1289;GTMatch=1;TruScore=66;MatchId=3045.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:41:./.:6:8:1:7:./.:0:0:0:0:0/0:33:0:./.:6:3:.:.:.
chr5	1458924	HG3_Ill_SVrefine2DISCOVARDovetail_4169	TGTGTGTACATGTGTAAGCCTCAGCATGAGTGCATGTGAGCATGTGTGTACATGTAAGCCTCAGCATGAGTGCATGTGAGCATGTGTACATGTGTAAGCCTCAGCATGAGTGCATGTGAGCATGTGTGTACATATGTAAGCCTCAGCATGAGTGCATGTGAGCATGTGTACATGTGTAAGCCTCAGCATGAGTGCATGTGAGCCTCAGCGTGAGTGCATGTGAGC	T	20	PASS	ClusterIDs=HG4_Ill_SVrefine2DISCOVARDovetail_4073:HG4_PB_SVrefine2Falcon1Dovetail_3340:HG3_PB_SVrefine2PBcRDovetail_2527:HG3_PB_SVrefine2Falcon1Dovetail_3397:HG3_Ill_SVrefine2DISCOVARDovetail_4169:HG2_PB_SVrefine2Falcon2Bionano_2695:HG2_PB_SVrefine2Falcon1plusDovetail_9357;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9357:HG2_PB_SVrefine2Falcon2Bionano_2695:HG3_Ill_SVrefine2DISCOVARDovetail_4169:HG3_PB_SVrefine2Falcon1Dovetail_3397:HG3_PB_SVrefine2PBcRDovetail_2527:HG4_PB_SVrefine2Falcon1Dovetail_3340;NumExactMatchSVs=6;ClusterMaxShiftDist=0.170732;ClusterMaxSizeDiff=0.170732;ClusterMaxEditDist=0.170732;PBcalls=5;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-224;DistBack=-916;DistForward=-26;DistMin=-916;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=616;REFWIDENED=5:1458925-1459764;PctSeqSimilarity=0.8912;PctSizeSimilarity=0.7321;PctRecOverlap=0;SizeDiff=60;StartDistance=-383;EndDistance=-323;GTMatch=0;TruScore=54;MatchId=3050.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:55:21:0|1:49:1:2:20:./.:0:0:0:0:0/0:24:0:./.:.:.:.:.:.
chr5	1644591	HG3_PB_SVrefine2PBcRDovetail_2533	AGAGCTCCACCGCACCCCGCAGGCAGGTGGATCTGATTTTCCTCTGCTGCAGAGTTTGCTGAAAGC	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_3968:HG3_PB_HySA_8354:HG4_PB_assemblyticsfalcon_20381:HG2_PB_assemblyticsPBcR_20150:HG3_PB_pbsv_5340:HG3_PB_HySA_8353:HG4_PB_pbsv_5515:HG2_PB_pbsv_5491:HG4_PB_SVrefine2PBcRDovetail_2786:HG3_PB_SVrefine2PBcRDovetail_2533:HG3_PB_SVrefine2Falcon1Dovetail_3406;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_3968:HG4_PB_SVrefine2PBcRDovetail_2786:HG3_PB_SVrefine2PBcRDovetail_2533:HG3_PB_SVrefine2Falcon1Dovetail_3406;NumExactMatchSVs=4;ClusterMaxShiftDist=0.146341;ClusterMaxSizeDiff=0.146341;ClusterMaxEditDist=0.218487;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-65;DistBack=6609;DistForward=292;DistMin=292;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=450;REFWIDENED=5:1644592-1645106;PctSeqSimilarity=0.9951;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-305;EndDistance=-305;GTMatch=0;TruScore=66;MatchId=3053.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:21:./.:3:12:21:8:./.:0:0:0:0:0/0:13:0:./.:.:.:.:.:.
chr5	11880584	HG2_PB_SVrefine2PBcRplusDovetail_8785	TACTACTACAACCACTACTACTGCTACTAGTACTACTACTACTACCACTACTACTACTACCACCACCACTACTACTACCACTACTACTGCTACTAGTACTACTACTACTACCACTACTCCTACTATCAGC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4038:HG4_PB_pbsv_5640:HG3_PB_pbsv_5448:HG2_PB_pbsv_5608:HG3_PB_HySA_8551:HG3_Ill_250bpfermikitraw_7425:HG3_Ill_150bpfermikitraw_7241:HG4_PB_SVrefine2PBcRDovetail_2847:HG4_PB_SVrefine2Falcon1Dovetail_3423:HG4_Ill_SVrefine2DISCOVARDovetail_4138:HG3_PB_SVrefine2PBcRDovetail_2588:HG3_PB_SVrefine2Falcon1Dovetail_3486:HG3_Ill_SVrefine2DISCOVARDovetail_4235:HG2_PB_SVrefine2PBcRplusDovetail_8785:HG2_PB_SVrefine2PB10Xhap12_4073:HG2_PB_SVrefine2Falcon2Bionano_2769:HG2_PB_SVrefine2Falcon1plusDovetail_9437:HG2_Ill_SVrefine2DISCOVARplusDovetail_10174;NumClusterSVs=18;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4038:HG4_PB_SVrefine2PBcRDovetail_2847:HG4_PB_SVrefine2Falcon1Dovetail_3423:HG4_Ill_SVrefine2DISCOVARDovetail_4138:HG3_PB_SVrefine2PBcRDovetail_2588:HG3_PB_SVrefine2Falcon1Dovetail_3486:HG3_Ill_SVrefine2DISCOVARDovetail_4235:HG2_PB_SVrefine2PBcRplusDovetail_8785:HG2_PB_SVrefine2PB10Xhap12_4073:HG2_PB_SVrefine2Falcon2Bionano_2769:HG2_PB_SVrefine2Falcon1plusDovetail_9437:HG2_Ill_SVrefine2DISCOVARplusDovetail_10174;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0634921;ClusterMaxSizeDiff=0.0634921;ClusterMaxEditDist=0.126984;PBcalls=12;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=4;NumTechs=3;NumTechsExact=3;SVLEN=-129;DistBack=-130;DistForward=-1;DistMin=-130;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=470;REFWIDENED=5:11880585-11881183;PctSeqSimilarity=0.9735;PctSizeSimilarity=0.9922;PctRecOverlap=0;SizeDiff=1;StartDistance=-283;EndDistance=-282;GTMatch=0;TruScore=65;MatchId=3082.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:59:1/1:1:32:4:21:./.:0:0:0:0:0/0:25:0:./.:.:.:.:.:.
chr5	14403087	HG4_PB_SVrefine2PBcRDovetail_2854	AGGTTGGAGATGGTGGTGAGGGTGCAGGTTGTGGTGAGGGTACAGGTTGTGGTGGTGAAGGTGCAGGTTGTGGTGGGTTGTGAGGGTGCAGGTTGTGGTGAGGGTACAGGTTGTGGTGGTGAGGGCATAGGTTGTGAGGGTGCAGGTTGTGGTGAGGGTGCAGGTTGTGGTGGTGAG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9445:HG4_PB_SVrefine2PBcRDovetail_2854:HG3_PB_SVrefine2PBcRDovetail_2595:HG2_PB_SVrefine2PBcRplusDovetail_8792:HG2_PB_SVrefine2PB10Xhap12_4078:HG2_PB_SVrefine2Falcon2Bionano_2778;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9445:HG4_PB_SVrefine2PBcRDovetail_2854:HG3_PB_SVrefine2PBcRDovetail_2595:HG2_PB_SVrefine2PBcRplusDovetail_8792:HG2_PB_SVrefine2PB10Xhap12_4078:HG2_PB_SVrefine2Falcon2Bionano_2778;NumExactMatchSVs=6;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-176;DistBack=-943;DistForward=-1;DistMin=-943;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=71;REFWIDENED=5:14403088-14403334;PctSeqSimilarity=0.9177;PctSizeSimilarity=0.9716;PctRecOverlap=0;SizeDiff=5;StartDistance=-439;EndDistance=-434;GTMatch=0;TruScore=62;MatchId=3089.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:44:1/1:3:26:3:12:./.:0:0:0:0:./.:14:1:./.:.:.:.:.:.
chr5	21543073	HG3_PB_pbsv_5490	ACAATTTATGATGTGATCTCATTATTTTTTTATGACTGGATAGTATTTCATGGTTTATGTGTATCCCATTTACTTTATCTACTGATCACTGATGGGTATTATGTTGATTCTGTGTCTTTGCTATTGTGAATAGGGCTGCAATGAACATACAAGTGCATGTGTCTTTATAATG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_8813:HG3_PB_pbsv_5490:HG3_PB_HySA_8658:HG4_PB_pbsv_5688:HG2_PB_pbsv_5656;NumClusterSVs=5;ExactMatchIDs=HG3_PB_pbsv_5490;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0233236;ClusterMaxSizeDiff=0.0231214;ClusterMaxEditDist=0.0520231;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-171;DistBack=-182;DistForward=4172;DistMin=-182;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=166;REFWIDENED=5:21542908-21543246;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3097.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:66:62:0|1:57:4:3:19:./.:0:0:0:0:0/0:138:5:./.:.:.:.:.:.
chr5	100645889	HG2_Ill_SVrefine2DISCOVARplusDovetail_10512	TGTATATATGGTATATATACACCTATGATGTATATATATGGTATATATACACCTATGATATATATATGGTATATATACACCTATGATGTATATATATGGTATATATACACCTATGATGT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10512:HG2_PB_assemblyticsfalcon_21726:HG2_PB_assemblyticsPBcR_20980:HG2_PB_SVrefine2PBcRplusDovetail_9025:HG2_PB_SVrefine2PB10Xhap12_4374:HG2_PB_SVrefine2Falcon2Bionano_2989:HG2_PB_SVrefine2Falcon1plusDovetail_9677;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10512:HG2_PB_SVrefine2PBcRplusDovetail_9025:HG2_PB_SVrefine2PB10Xhap12_4374:HG2_PB_SVrefine2Falcon2Bionano_2989:HG2_PB_SVrefine2Falcon1plusDovetail_9677;NumExactMatchSVs=5;ClusterMaxShiftDist=0.025;ClusterMaxSizeDiff=0.0166667;ClusterMaxEditDist=0.0833333;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-118;DistBack=31;DistForward=23002;DistMin=31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=449;REFWIDENED=5:100645549-100646115;PctSeqSimilarity=0.9214;PctSizeSimilarity=0.9219;PctRecOverlap=0;SizeDiff=-10;StartDistance=233;EndDistance=223;GTMatch=0;TruScore=61;MatchId=3204.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:37:0|1:24:5:4:31:./.:0:0:0:0:0/0:60:0:./.:.:.:.:.:.
chr5	106741701	HG3_PB_pbsv_5880	CTATGTATTTATATACATAGAATGTATAAAAATACCTATATTTGTATACATATT	C	20	PASS	ClusterIDs=HG2_Ill_SpiralSDKrefine_13843:HG3_PB_pbsv_5880:HG2_PB_pbsv_6044:HG3_Ill_250bpfermikitraw_8154;NumClusterSVs=4;ExactMatchIDs=HG3_PB_pbsv_5880;NumExactMatchSVs=1;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.0740741;PBcalls=2;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-53;DistBack=-83;DistForward=-6;DistMin=-83;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=377;REFWIDENED=5:106741522-106741951;PctSeqSimilarity=0.9932;PctSizeSimilarity=0.9815;PctRecOverlap=0;SizeDiff=-1;StartDistance=73;EndDistance=72;GTMatch=0;TruScore=65;MatchId=3212.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:39:1|0:3:28:28:2:./.:0:0:0:0:0/0:26:1:./.:.:.:.:.:.
chr5	165227784	HG2_PB_SVrefine2Falcon1plusDovetail_9865	GTGAAAAGACAATCTTTTCAATAAAAGATTTTGAAAAGACAATCTTTTCAATAAAAGATTTTGAAAAGACAATCTTTTCAATAAAAGATTT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9865:HG4_Ill_GATKHC_10684:HG4_PB_pbsv_6311:HG2_PB_pbsv_6297:HG2_PB_SVrefine2PB10Xhap12_4607;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9865:HG2_PB_SVrefine2PB10Xhap12_4607;NumExactMatchSVs=2;ClusterMaxShiftDist=0.153846;ClusterMaxSizeDiff=0.153846;ClusterMaxEditDist=0.190476;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-90;DistBack=0;DistForward=-91;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=459;REFWIDENED=5:165227785-165228333;PctSeqSimilarity=0.9965;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-283;EndDistance=-283;GTMatch=0;TruScore=66;MatchId=3291.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:41:./.:20:13:2:24:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr5	173391440	HG2_10X_SVrefine210Xhap12_4588	TGGGTGGGGTAGGGTGGGTGAGGGTGGGGTGGGGTGAGGGTGACGGTGGGGTGGGGTGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4588:HG3_PB_pbsv_6136:HG2_PB_pbsv_6331:HG3_Ill_SVrefine2DISCOVARDovetail_4864;NumClusterSVs=4;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4588:HG3_Ill_SVrefine2DISCOVARDovetail_4864;NumExactMatchSVs=2;ClusterMaxShiftDist=0.126984;ClusterMaxSizeDiff=0.126984;ClusterMaxEditDist=0.222222;PBcalls=2;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=0;NumTechs=3;NumTechsExact=2;SVLEN=-58;DistBack=91468;DistForward=12;DistMin=12;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=142;REFWIDENED=5:173391441-173391640;PctSeqSimilarity=0.9274;PctSizeSimilarity=0.8923;PctRecOverlap=0;SizeDiff=-7;StartDistance=-85;EndDistance=-92;GTMatch=0;TruScore=60;MatchId=3300.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:28:0|1:26:2:5:19:./.:0:0:0:0:0/0:13:0:./.:.:.:.:.:.
chr5	173544924	HG2_PB_SVrefine2Falcon2Bionano_3174	CCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCCT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_9893:HG3_PB_SVrefine2Falcon1Dovetail_3952:HG3_PB_assemblyticsfalcon_22199:HG3_PB_assemblyticsfalcon_22198:HG3_Ill_manta_1515:HG4_Ill_250bpfermikitraw_9053:HG3_PB_pbsv_6139:HG2_PB_pbsv_6334:HG4_PB_pbsv_6346:HG3_Ill_SVrefine2DISCOVARDovetail_4866:HG2_PB_SVrefine2PBcRplusDovetail_9221:HG2_PB_SVrefine2Falcon2Bionano_3174:HG2_Ill_SVrefine2DISCOVARplusDovetail_10812:HG4_PB_SVrefine2Falcon1Dovetail_3852:HG4_Ill_SVrefine2DISCOVARDovetail_4744:HG2_PB_SVrefine2PB10Xhap12_4633;NumClusterSVs=16;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_10812:HG2_PB_SVrefine2Falcon2Bionano_3174:HG2_PB_SVrefine2PBcRplusDovetail_9221:HG3_Ill_SVrefine2DISCOVARDovetail_4866;NumExactMatchSVs=4;ClusterMaxShiftDist=0.281369;ClusterMaxSizeDiff=0.281369;ClusterMaxEditDist=0.288973;PBcalls=11;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=6;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-148;DistBack=-81;DistForward=-98;DistMin=-98;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=191;REFWIDENED=5:173544925-173545263;PctSeqSimilarity=0.9423;PctSizeSimilarity=0.9459;PctRecOverlap=0;SizeDiff=8;StartDistance=-159;EndDistance=-151;GTMatch=0;TruScore=62;MatchId=3301.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:./.:20:9:8:18:./.:0:0:0:0:0/1:19:7:./.:.:.:.:.:.
chr5	174645851	HG2_PB_SVrefine2PB10Xhap12_4638	AAGAATGAGGACTGCACCAGGGCAGGAATACTCACAGCCAGAGCCCATTGC	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4638:HG4_PB_assemblyticsfalcon_21752:HG4_PB_HySA_9500:HG3_PB_assemblyticsfalcon_22206:HG4_Ill_SVrefine2DISCOVARDovetail_4746;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4638:HG4_Ill_SVrefine2DISCOVARDovetail_4746;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0384615;ClusterMaxSizeDiff=0.0384615;ClusterMaxEditDist=0.211538;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=7579;DistForward=84;DistMin=84;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=299;REFWIDENED=5:174645852-174646200;PctSeqSimilarity=0.9467;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-74;EndDistance=-74;GTMatch=0;TruScore=64;MatchId=3302.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:22:./.:11:18:20:3:./.:0:0:0:0:0/0:50:0:./.:.:.:.:.:.
chr5	176878317	HG4_PB_SVrefine2Falcon1Dovetail_3873	CAGCCTGCTTCGGAGAGTGAGTGTGGAGCCCACCCTCAGGCAGGGAGCACCCTGTAGCCTGCTTCGGAGAGTGAGTGTGGAGCCCACCCTCAGGCAGGGAGCACCCTGTAGCCTGCTTCGGAGAGTGAGTGTGGAGCCCACCCTCAGGCAGGGAGCACCCTGTAGCCTGCTTCGGAGAGTGAGTGTGGAACCCACCCTCAGGCAGGGAGCACCCTGT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_3186:HG2_PB_SVrefine2Falcon1plusDovetail_9908:HG2_PB_assemblyticsfalcon_22319:HG2_PB_pbsv_6365:HG3_PB_pbsv_6168:HG4_PB_SVrefine2Falcon1Dovetail_3873:HG3_PB_SVrefine2PBcRDovetail_2948:HG3_PB_SVrefine2Falcon1Dovetail_3972:HG3_Ill_SVrefine2DISCOVARDovetail_4879;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_3186:HG4_PB_SVrefine2Falcon1Dovetail_3873:HG3_PB_SVrefine2PBcRDovetail_2948:HG3_PB_SVrefine2Falcon1Dovetail_3972:HG3_Ill_SVrefine2DISCOVARDovetail_4879;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0137931;ClusterMaxSizeDiff=0.0137931;ClusterMaxEditDist=0.0367816;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-216;DistBack=-163;DistForward=-120;DistMin=-163;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=325;REFWIDENED=5:176878318-176878858;PctSeqSimilarity=0.9859;PctSizeSimilarity=0.9908;PctRecOverlap=0;SizeDiff=-2;StartDistance=-247;EndDistance=-249;GTMatch=0;TruScore=65;MatchId=3306.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:17:0|1:26:2:2:14:./.:0:0:0:0:./.:7:1:./.:.:.:.:.:.
chr6	418972	HG4_PB_SVrefine2PBcRDovetail_3206	CCAACCCAAGCGGGACCTCCCTCCCCCACCAGCACCCCCATGCGGGACCTCTCTCCCCCACCAGCACCCCCATGTGGGACCTCCAACCCCCACCAG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_4712:HG4_PB_HySA_9626:HG3_PB_HySA_9995:HG3_PB_pbsv_6251:HG2_PB_pbsv_6439:HG4_PB_pbsv_6453:HG4_PB_SVrefine2PBcRDovetail_3206:HG4_PB_SVrefine2Falcon1Dovetail_3924:HG3_PB_SVrefine2PBcRDovetail_2987:HG2_PB_SVrefine2PBcRplusDovetail_9283;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_4712:HG4_PB_SVrefine2PBcRDovetail_3206:HG4_PB_SVrefine2Falcon1Dovetail_3924:HG3_PB_SVrefine2PBcRDovetail_2987:HG2_PB_SVrefine2PBcRplusDovetail_9283;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0307692;ClusterMaxSizeDiff=0.0307692;ClusterMaxEditDist=0.102564;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-95;DistBack=21915;DistForward=-93;DistMin=-93;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=416;REFWIDENED=6:418973-419483;PctSeqSimilarity=0.9657;PctSizeSimilarity=0.9896;PctRecOverlap=0;SizeDiff=-1;StartDistance=-115;EndDistance=-116;GTMatch=0;TruScore=65;MatchId=3319.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:28:1|0:3:18:16:5:./.:0:0:0:0:0/0:10:0:./.:.:.:.:.:.
chr6	13231229	HG2_PB_SVrefine2PB10Xhap12_4818	CAGAGAGAGAGAGAGAGAGAAGGAAAGAAAGAAAGAGAGAGAGAGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAGGAAGGAAGGGAAAAGAAAGAAGGAA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_4746:HG4_PB_SVrefine2PBcRDovetail_3288:HG2_PB_pbsv_6578:HG3_PB_assemblyticsfalcon_22496:HG4_PB_assemblyticsfalcon_22033:HG2_PB_HySA_12261:HG3_Ill_250bpfermikitraw_8926:HG2_Ill_150bpfermikitraw_8654:HG4_Ill_GATKHC_11077:HG4_PB_pbsv_6587:HG3_PB_HySA_10221:HG2_Ill_SpiralSDKrefine_14386:HG3_PB_SVrefine2PBcRDovetail_3072:HG3_Ill_SVrefine2DISCOVARDovetail_5001:HG4_PB_SVrefine2Falcon1Dovetail_4014:HG4_Ill_SVrefine2DISCOVARDovetail_4892:HG2_PB_SVrefine2PBcRplusDovetail_9339:HG2_PB_SVrefine2PB10Xhap12_4818:HG2_PB_SVrefine2Falcon2Bionano_3301:HG2_PB_SVrefine2Falcon1plusDovetail_10055:HG2_Ill_SVrefine2DISCOVARplusDovetail_10943:HG3_PB_pbsv_6399;NumClusterSVs=22;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_4746:HG4_Ill_SVrefine2DISCOVARDovetail_4892:HG2_PB_SVrefine2PBcRplusDovetail_9339:HG2_PB_SVrefine2PB10Xhap12_4818:HG2_PB_SVrefine2Falcon2Bionano_3301:HG2_PB_SVrefine2Falcon1plusDovetail_10055:HG2_Ill_SVrefine2DISCOVARplusDovetail_10943;NumExactMatchSVs=7;ClusterMaxShiftDist=0.341085;ClusterMaxSizeDiff=0.341085;ClusterMaxEditDist=0.341085;PBcalls=14;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-118;DistBack=6324;DistForward=-77;DistMin=-77;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=291;REFWIDENED=6:13231230-13231638;PctSeqSimilarity=0.9393;PctSizeSimilarity=0.8872;PctRecOverlap=0;SizeDiff=-15;StartDistance=-329;EndDistance=-344;GTMatch=0;TruScore=60;MatchId=3343.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:64:1/1:3:43:1:12:./.:0:0:0:0:0/1:33:14:./.:.:.:.:.:.
chr6	74370288	HG3_PB_assemblyticsfalcon_23130	GGGGGCTGACCCCCCCACCTCCCTCCCGGACGAGGCGGCTGGCCGGGCAGA	G	10	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_22486:HG4_PB_assemblyticsfalcon_22652:HG3_PB_assemblyticsfalcon_23130:HG2_PB_assemblyticsfalcon_23252;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsfalcon_23252:HG3_PB_assemblyticsfalcon_23130:HG4_PB_assemblyticsfalcon_22652;NumExactMatchSVs=3;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.0990099;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-50;DistBack=-109;DistForward=250;DistMin=-109;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=138;REFWIDENED=6:74370157-74370344;PctSeqSimilarity=0.9778;PctSizeSimilarity=0.98;PctRecOverlap=0;SizeDiff=1;StartDistance=111;EndDistance=112;GTMatch=1;TruScore=65;MatchId=3426.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:48:1/1:4:33:1:10:./.:0:0:0:0:0/1:22:4:./.:.:.:.:.:.
chr6	111450070	HG4_Ill_150bpfermikitraw_9726	TTTTATTTTTTCATATTCAAAAATAAAACAATTTTCATATTCATTTCAATTG	T	20	PASS	ClusterIDs=HG2_PB_HySA_13332:HG2_PB_assemblyticsPBcR_22788:HG4_Ill_GATKHC_12093:HG4_Ill_GATKHCSBGrefine_5093:HG2_Ill_GATKHC_12060:HG2_Ill_GATKHCSBGrefine_5019:HG4_Ill_manta_1807:HG2_Ill_manta_2082:HG2_Ill_SpiralSDKrefine_15025:HG2_PB_pbsv_7199:HG4_PB_pbsv_7199:HG4_Ill_svaba_9418:HG4_Ill_Krunchall_10746:HG4_Ill_250bpfermikitraw_10135:HG4_Ill_150bpfermikitraw_9726:HG3_PB_assemblyticsfalcon_23416:HG2_Ill_svaba_9330:HG2_Ill_Krunchall_10419:HG2_Ill_250bpfermikitraw_10126:HG2_Ill_150bpfermikitraw_9534;NumClusterSVs=20;ExactMatchIDs=HG2_Ill_150bpfermikitraw_9534:HG2_Ill_250bpfermikitraw_10126:HG2_Ill_Krunchall_10419:HG2_Ill_svaba_9330:HG3_PB_assemblyticsfalcon_23416:HG4_Ill_150bpfermikitraw_9726:HG4_Ill_250bpfermikitraw_10135:HG4_Ill_Krunchall_10746:HG4_Ill_svaba_9418;NumExactMatchSVs=9;ClusterMaxShiftDist=0.178571;ClusterMaxSizeDiff=0.178571;ClusterMaxEditDist=0.307692;PBcalls=5;Illcalls=15;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=8;TenXexactcalls=0;CGexactcalls=0;HG2count=11;HG3count=1;HG4count=8;NumTechs=2;NumTechsExact=2;SVLEN=-51;DistBack=38958;DistForward=13110;DistMin=13110;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=68;REFWIDENED=6:111450071-111450189;PctSeqSimilarity=0.9194;PctSizeSimilarity=0.8361;PctRecOverlap=0;SizeDiff=-10;StartDistance=-56;EndDistance=-66;GTMatch=0;TruScore=58;MatchId=3484.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:37:0|1:32:4:2:31:./.:0:0:0:0:0/1:31:21:./.:.:.:.:.:.
chr6	161511387	HG4_Ill_SVrefine2DISCOVARDovetail_5558	CGAGCCAGGGCAGGGCTTCTCAGCCTCTTGGATGTGGACGTTTGGGCCCGTAACTCTTGGTCGTGGAGGGCCGTCCTGCGCATTGTAGGATGTTTAGAGCTAGGGCAGGGCTTCTCAGCCTCTTGGATGTGGACGTTTGGGCCCGTAACTCTTGGTCGTGGAGGGCTGTCCTGCGCATTGTAGGATGTTTA	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11646:HG2_PB_pbsv_7487:HG4_PB_pbsv_7485:HG2_Ill_breakscan11_1082:HG4_PB_SVrefine2PBcRDovetail_3694:HG4_Ill_SVrefine2DISCOVARDovetail_5558:HG2_PB_SVrefine2PB10Xhap12_5438:HG2_PB_SVrefine2Falcon2Bionano_3655;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11646:HG4_PB_SVrefine2PBcRDovetail_3694:HG4_Ill_SVrefine2DISCOVARDovetail_5558:HG2_PB_SVrefine2PB10Xhap12_5438:HG2_PB_SVrefine2Falcon2Bionano_3655;NumExactMatchSVs=5;ClusterMaxShiftDist=0.015748;ClusterMaxSizeDiff=0.015748;ClusterMaxEditDist=0.0421053;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-190;DistBack=89251;DistForward=-191;DistMin=-191;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=286;REFWIDENED=6:161511388-161511863;PctSeqSimilarity=0.9881;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-252;EndDistance=-252;GTMatch=0;TruScore=66;MatchId=3553.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:30:./.:7:17:18:8:./.:0:0:0:0:0/0:29:1:./.:.:.:.:.:.
chr6	162583759	HG4_PB_SVrefine2Falcon1Dovetail_4551	TGGCCGGGTGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACAAGGTAAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCCATCTCTACTAAAAATACAAAAATCAGTGGGGCGTGATGGTGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGAAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCACTGTACTCCAGCCTGGGCGACAGAGCGAGATTCTGTCTCAAAAAAATAAATAAATAAAAAGAAAAATTTCTCATAGGACTACAGTTCCCCTGGGATATTACTATTCATTTATAATCTATCATTTTGCAAGCTGAATACCTTCTTAACAATTTCTTAAAGTGCTATGAATGCCTAGACTTCTAAGACAGTGATGCCAGTGTCTCTAACTTCCTGTATATGCCACGCTAGTTTCTGTATAGAATAGGTTATCAATTTTACGTCTGTGTTAAGGACAGGAATCACAGGACATCTCACTTATTAAACGGCATCTATGGAATTATGCCAAACACATTTATCTATAAAGAATGCTGGTCCTCACTATTTTTCATTAATCAAATGCAATGTGTAACCAGTTACAAAGCCTGTAGTATTAATAGAAGCTTCTAATCTGTATAGCATGCTGCTTTCTTTTAGCTGAAATAACATTTAAAATTCATAAATATTGGAGGTAAAAAGAAGAAAAAAGATTATAATGTGTGCTCTGGCTTGTAGCCCGAGGAGAACAGAAACAGGGGAAAAACAGGTAATGCTTTCCAGCGATGAGTGATGAAAAAGAAGCACAACAATTCCAGTGACTGTATGAGAACAGCCAGAAATCATTCTTCTAAAAAATAGTTTTAAGCAGAACAATGATCTAGAAAAGGATCACAACACATTGCACCGCCCTGAGCAGTCCCATAAAGCAGTGTGATGCCTCTATAAAGCAAAGTTCCGTCCAACAGGGCTGTCAGAGGGGAACATGAGTGAAAGGGAGGGAGCGCCTTGCACATTTATATCCATGCTGCAATGATCCCCACATCTCTCATGGTGCCCAGCGCACGTCTCCTCCTGCACCCACAACCAGGAATTAGGCTCCACGTTCACCTGCTCTGCAGCTACAGGCCTTATCCTCTAATTAAACCAACCCCACTGCTCTAGAAGAATAGCCCTGCTCGGTGACTCACTAACATTTAAGAATACACACATGTGAAACTAAGATGAAAATGAGGGCGGAGATGATTTATGTGAAAGGACATTTAAAGATGAATAGGTTTTGTGAGGTTGAGGAAGCCTGCCCCTCTAGAGACAGAGGAGGCATTTGCTCAAGTGTGGAATACCAGCTGTTGAAATGTTAAGTCAAATGAAGTAGAAATGTAATGTTATTTAACAATGGCCGAAAAGGAACTCGCTAATTAGTATTTAGCAAAAAAAGGTTTTGAGTGGTCAACCTGTGTATTTGTTTATTTGTTTGCTTTTGTTTGGAGACGGTCTTGCTCTGTCCTCTGGAGGGCAGTGGCACTATCTCGGCTCTGCAACCCCCATCTCCATCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTCTGCGCTACCATGCCCGGCTAATTTTTTTGTATTTTAGTAGTGACGGTGTGTTTCACCATGTTGCCCAGGTTGGTCTCGAACTGCCGACCTCAGGCAAACCTCCCACCTTGGCCTCCCAAAGTGCTAAGATTACAGGTGTGAGCCACCATGCCTGGCCTAATCTGTGGACTTTTTGTGTGTAGAGTGTGACTGTTACAAATGGGAATGCCCTAATCTATATGTTACTGTGGAATTTTCCTATATAACAAAAGAAACTTCTAAGAACTGCTACCATTTGGAATCCAGTAATTGTATTTATATTGAAATATTTATTATAATGAAGTATAGCAGAAAGGCTAGTGAGTTACAGAACAATATCAGAAGCCTATGTGCCATCTAAAATTTTCTTTTATTTTTTAAATTAAAATGATCTCACCAAGCTTAATCATCTCTAAATCTAAAATTTTCTACCAAGTTTACTAGGACACTAGAGGCCTATTTCTCCAGAAAAAATGGTAATACTAATTTTTACATATATTAGAAACTAAACATTTTCCAGGAATGTACAATTACTCTGGAAATTCCAAATCTTTATGTCAAAAAACCTAGAAAATCTGCCAAATGTACCATGTCTAAACCTAAGTGGGTATTGCTACTAATGGTATCTTTACTCTGTCTTTATATAGAAACAGGCTTATTTGGAATTTAGGGCTCAGAAATAGACCTACACATACATGACATGGTCATTTGATTTTCAACAAATGTATCATAGTCATCCAAATAAAAAAGTAACAACTGCATATCCATATAGATATCCATACCTCACACTATCATAAAATTTACATATGTTGGATCCTAAACCTAAATGTGAATGCCAAAACTATGGAGCTTCTGGAAAAAAAAATAGGAGAATATTTCATGAGTTGGGATTAGGCAAAGGTTTCTTTGACAGGTTAGAGACCACAATATCATTAAAAAGTAATAAACTTAGAAATTAAAACATCTGTTCATAAAAAATATGAAGAAAATGAATTACCAAACTCCAGACTATAAGAAAATAGTTCCAAAACATACACCTGATAAAGTACTGATATGTAATAAATAGATCAAAGCTTCCAGAACAATATATACATTTCCTAATGAACCTAATTTGAAAGTGAACAAAATACAAGAAGAGACATCACGAAAAGAAAAATATGAATCACTAACCAGCACGTAAGAAAGCACATAACATTGTCAGTGAGTCTGAATGGAATGCCAGTGCACAGGCACCAGAATGAAAGCCTGACAGCATCCGAGGCGGCGGAGCCACCGTAATGCTCATGAAGAGTCAGAGGTTTGACCTTTTGCTATCAATGTTGTTATAAATGTTAATGCACAACTATCTGTCAGCCCAGCAATTCCACTGCAGGACATTTACTCAAGAGAAGTGA	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_5386:HG4_PB_pbsv_7499:HG4_10X_allpass_1499:HG4_PB_assemblyticsfalcon_23381:HG2_10X_allpass_1279:HG2_PB_assemblyticsPBcR_23236:HG2_PB_SVrefine2PBcRplusDovetail_9873:HG4_Ill_Krunchall_11176:HG4_PB_pbsv_7498:HG2_PB_pbsv_7500:HG4_Ill_MetaSV_4739:HG2_Ill_MetaSV_4539:HG4_PB_SVrefine2PBcRDovetail_3702:HG4_PB_SVrefine2Falcon1Dovetail_4551:HG4_Ill_SVrefine2DISCOVARDovetail_5566:HG3_PB_SVrefine2Falcon1Dovetail_4497:HG2_PB_SVrefine2PBcRplusDovetail_9872:HG2_PB_SVrefine2PB10Xhap12_5449:HG2_PB_SVrefine2Falcon2Bionano_3663:HG2_PB_SVrefine2Falcon1plusDovetail_10616;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_5386:HG4_PB_SVrefine2PBcRDovetail_3702:HG4_PB_SVrefine2Falcon1Dovetail_4551:HG4_Ill_SVrefine2DISCOVARDovetail_5566:HG3_PB_SVrefine2Falcon1Dovetail_4497:HG2_PB_SVrefine2PBcRplusDovetail_9872:HG2_PB_SVrefine2PB10Xhap12_5449:HG2_PB_SVrefine2Falcon2Bionano_3663:HG2_PB_SVrefine2Falcon1plusDovetail_10616;NumExactMatchSVs=9;ClusterMaxShiftDist=0.214298;ClusterMaxSizeDiff=0.214298;ClusterMaxEditDist=0.214298;PBcalls=13;Illcalls=4;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=1;HG4count=9;NumTechs=3;NumTechsExact=3;SVLEN=-3039;DistBack=99090;DistForward=-3029;DistMin=-3029;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=302;REFWIDENED=6:162583760-162587100;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3556.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:50:53:./.:25:12:20:15:./.:0:0:0:0:0/1:49:11:0/1:247:117:3067:.:.
chr6	167657503	HG2_Ill_SVrefine2DISCOVARplusDovetail_11685	GCCATCCTGCTTTCTGTGGGACCGCTGACAGAGGAGGGGTGCTGGTCTGCCTTCTCTGTGAGCTGTGCCTTGGGTACTGCA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11685:HG3_PB_pbsv_7304:HG2_PB_pbsv_7548:HG3_PB_SVrefine2PBcRDovetail_3435:HG3_Ill_SVrefine2DISCOVARDovetail_5779;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11685:HG3_PB_SVrefine2PBcRDovetail_3435:HG3_Ill_SVrefine2DISCOVARDovetail_5779;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0125;ClusterMaxSizeDiff=0.0124224;ClusterMaxEditDist=0.0993789;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-80;DistBack=4433;DistForward=3383;DistMin=3383;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=395;REFWIDENED=6:167657504-167657978;PctSeqSimilarity=0.9703;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-117;EndDistance=-117;GTMatch=0;TruScore=65;MatchId=3574.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:22:./.:19:15:11:5:./.:0:0:0:0:0/0:40:0:./.:.:.:.:.:.
chr6	167708862	HG2_Ill_SVrefine2DISCOVARplusDovetail_11686	CCCTCGGCCTCCCTCGTGCTCCTCGCCTCCCTCGTGCTCCTCGCCTCCCTCGTGATCCTCGGCCTCCCTCGTGCTCCTCGCCTCCCTCGTGCTCCTCGCCTCCCTCGTGAACCTCGCCTCCCTCGTGATCCTCGCCTGCCTCGTGCT	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_3436:HG3_PB_HySA_11560:HG2_Ill_breakscan11_1091:HG2_PB_pbsv_7550:HG3_PB_pbsv_7305:HG4_PB_SVrefine2Falcon1Dovetail_4588:HG3_PB_SVrefine2Falcon1Dovetail_4535:HG3_Ill_SVrefine2DISCOVARDovetail_5780:HG2_PB_SVrefine2PB10Xhap12_5488:HG2_PB_SVrefine2Falcon1plusDovetail_10652:HG2_Ill_SVrefine2DISCOVARplusDovetail_11686;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11686:HG2_PB_SVrefine2Falcon1plusDovetail_10652:HG2_PB_SVrefine2PB10Xhap12_5488:HG3_Ill_SVrefine2DISCOVARDovetail_5780:HG3_PB_SVrefine2Falcon1Dovetail_4535:HG4_PB_SVrefine2Falcon1Dovetail_4588;NumExactMatchSVs=6;ClusterMaxShiftDist=0.145985;ClusterMaxSizeDiff=0.145985;ClusterMaxEditDist=0.21978;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-146;DistBack=24114;DistForward=-147;DistMin=-147;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=242;REFWIDENED=6:167708863-167709250;PctSeqSimilarity=0.9682;PctSizeSimilarity=0.9863;PctRecOverlap=0;SizeDiff=2;StartDistance=-173;EndDistance=-171;GTMatch=0;TruScore=65;MatchId=3575.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:34:0|1:16:1:2:32:./.:0:0:0:0:0/0:21:1:./.:.:.:.:.:.
chr6	169012073	HG2_PB_assemblyticsfalcon_24119	TCTGGTTCTCATGTCCGGGACCCACCGTGGCTCCCGTGTCGGGCCTGGCCGTGGCTCCCATGTCTGGCCCTGCA	T	10	PASS	ClusterIDs=HG3_PB_HySA_11656:HG2_PB_assemblyticsPBcR_23358:HG2_PB_assemblyticsPBcR_23360:HG2_PB_assemblyticsPBcR_23359:HG3_PB_assemblyticsfalcon_23952:HG2_PB_assemblyticsfalcon_24119:HG4_PB_assemblyticsfalcon_23521:HG3_PB_pbsv_7366:HG2_PB_pbsv_7609:HG2_PB_HySA_14039:HG4_PB_pbsv_7612;NumClusterSVs=11;ExactMatchIDs=HG2_PB_assemblyticsfalcon_24119:HG3_PB_assemblyticsfalcon_23952;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0408163;ClusterMaxSizeDiff=0.0408163;ClusterMaxEditDist=0.205479;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-73;DistBack=465;DistForward=95;DistMin=95;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=500;REFWIDENED=6:169011880-169012452;PctSeqSimilarity=0.9923;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=194;EndDistance=194;GTMatch=0;TruScore=66;MatchId=3582.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:47:1/1:2:20:4:25:./.:0:0:0:0:./.:2:1:./.:.:.:.:6690:.
chr6	170744351	HG4_Ill_SVrefine2DISCOVARDovetail_5637	CGTGAAGCGGCCTTTCCCCAGGAACATCCCCAGGTCTCCCCCACGCGAGGCTCAGGCCCGGCTGTCAGCACGGGAGATTGACAG	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11738:HG4_PB_pbsv_7707:HG4_Ill_250bpfermikitraw_10690:HG4_Ill_150bpfermikitraw_10249:HG2_Ill_250bpfermikitraw_10679:HG2_PB_pbsv_7681:HG4_PB_SVrefine2PBcRDovetail_3796:HG4_Ill_SVrefine2DISCOVARDovetail_5637:HG3_PB_SVrefine2Falcon1Dovetail_4620:HG2_PB_SVrefine2PBcRplusDovetail_9981:HG2_PB_SVrefine2Falcon2Bionano_3768:HG2_PB_SVrefine2Falcon1plusDovetail_10745;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11738:HG4_PB_SVrefine2PBcRDovetail_3796:HG4_Ill_SVrefine2DISCOVARDovetail_5637:HG3_PB_SVrefine2Falcon1Dovetail_4620:HG2_PB_SVrefine2PBcRplusDovetail_9981:HG2_PB_SVrefine2Falcon2Bionano_3768:HG2_PB_SVrefine2Falcon1plusDovetail_10745;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0240964;ClusterMaxSizeDiff=0.0240964;ClusterMaxEditDist=0.060241;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-83;DistBack=5033;DistForward=0;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=166;REFWIDENED=6:170744352-170744600;PctSeqSimilarity=0.9885;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-129;EndDistance=-129;GTMatch=0;TruScore=66;MatchId=3587.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:27:0|1:16:3:2:16:./.:0:0:0:0:0/1:20:10:./.:.:.:.:.:.
chr7	1358742	HG2_PB_SVrefine2PB10Xhap12_5663	ATGTGCGTGTCTGTGTGGGTGCATCTGATGTGTGCGTGTCTGTGTGGGTGCATCTGATGTGTGCGTGTCTGTGTGGGTGCATCTGATGTGTGCGTGTCTGTGTGTGTGCATCTTATGTGTGTCTGTGTGTGTGCATCTGATGTGTGCGTGTCTGTGTGGGTGCATCTGATGTGTGCGTGTCTGTGTGGGTGCATCTGATGTGTGTGTCTGTGTGTGTGCATCTGATGTGTGTGTCTGTGTGTGTGCATCTGATGTGTGCGTGTCTGTGTGGGTGCATCTGATGTGTGTGTGTCTGTGTGTGTGCATCTGATGTGTGTGTCTGTGTGTGTGCATCTGATG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10835:HG2_PB_SVrefine2PBcRplusDovetail_10063:HG2_PB_pbsv_7808:HG2_PB_SVrefine2PB10Xhap12_5663;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_5663:HG2_PB_SVrefine2PBcRplusDovetail_10063;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0893683;ClusterMaxSizeDiff=0.0893683;ClusterMaxEditDist=0.216383;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-338;DistBack=-30;DistForward=-306;DistMin=-306;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1076;REFWIDENED=7:1358743-1360156;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3613.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:22:0|1:17:1:5:20:./.:0:0:0:0:0/0:22:0:0/0:38:1:.:.:.
chr7	1396641	HG2_Ill_SVrefine2DISCOVARplusDovetail_11774	GCAGCACACAGTAGGTAAATCCTCAGCACACACTAGATAAATCTTTAGCACACAGTAGGTCAATCCTCAGCACATAGTAGGTAAATCCT	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11774:HG2_Ill_breakscan11_1136:HG2_PB_pbsv_7809:HG2_Ill_GATKHCSBGrefine_5386:HG4_PB_pbsv_7845:HG4_PB_SVrefine2PBcRDovetail_3851:HG4_Ill_SVrefine2DISCOVARDovetail_5676:HG2_PB_SVrefine2PBcRplusDovetail_10064:HG2_PB_SVrefine2PB10Xhap12_5664;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11774:HG4_PB_SVrefine2PBcRDovetail_3851:HG4_Ill_SVrefine2DISCOVARDovetail_5676:HG2_PB_SVrefine2PBcRplusDovetail_10064:HG2_PB_SVrefine2PB10Xhap12_5664;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0338983;ClusterMaxSizeDiff=0.0338983;ClusterMaxEditDist=0.102273;PBcalls=5;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-88;DistBack=29532;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=626;REFWIDENED=7:1396552-1397265;PctSeqSimilarity=0.9843;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-254;EndDistance=-254;GTMatch=0;TruScore=66;MatchId=3614.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:27:./.:28:8:10:18:./.:0:0:0:0:0/0:68:0:./.:.:.:.:.:.
chr7	26050235	HG4_PB_SVrefine2PBcRDovetail_3951	TAGAATAGCCTGTAACAGGCTATACATAAGAATAGCCTGTTACAGGCTATACATAAGAATAGCCTGTAACAGGCTATACATAAGAATAGCCTGTAACAGGCTATACATA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11927:HG4_PB_HySA_11765:HG2_PB_pbsv_7991:HG4_PB_pbsv_8016:HG4_PB_SVrefine2PBcRDovetail_3951:HG2_PB_SVrefine2PB10Xhap12_5800:HG2_PB_SVrefine2Falcon1plusDovetail_10953;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_11927:HG4_PB_SVrefine2PBcRDovetail_3951:HG2_PB_SVrefine2PB10Xhap12_5800:HG2_PB_SVrefine2Falcon1plusDovetail_10953;NumExactMatchSVs=4;ClusterMaxShiftDist=0.027907;ClusterMaxSizeDiff=0.027907;ClusterMaxEditDist=0.056338;PBcalls=6;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-108;DistBack=-1;DistForward=-109;DistMin=-109;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=208;REFWIDENED=7:26050236-26050551;PctSeqSimilarity=0.9943;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-175;EndDistance=-175;GTMatch=0;TruScore=66;MatchId=3659.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:19:0|1:20:3:1:16:./.:0:0:0:0:0/1:17:7:./.:.:.:.:.:.
chr7	26216057	HG3_PB_SVrefine2PBcRDovetail_3673	AGCCAGGCAGAGGCGCTCCTCACTTCCCAGACGGGGCGGCCGGGCAGAGGCGCTCCTCACATCCCAGACGATGGGCAGCCGGGCAGAGGCGCTCCTCACATCCCAGACGGGGTG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10955:HG2_PB_PB10Xdip_27234:HG3_PB_pbsv_7779:HG4_PB_pbsv_8019:HG2_PB_assemblyticsfalcon_24579:HG2_PB_SVrefine2Falcon1plusDovetail_10956:HG2_PB_assemblyticsPBcR_23796:HG2_PB_SVrefine2PBcRplusDovetail_10154:HG2_PB_SVrefine2PB10Xhap12_5804:HG2_PB_pbsv_7995:HG4_PB_SVrefine2PBcRDovetail_3954:HG4_PB_SVrefine2Falcon1Dovetail_4899:HG3_PB_SVrefine2PBcRDovetail_3673:HG3_PB_SVrefine2Falcon1Dovetail_4827:HG2_PB_SVrefine2PB10Xhap12_5803:HG2_PB_SVrefine2Falcon2Bionano_3939;NumClusterSVs=16;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_10955:HG4_PB_SVrefine2PBcRDovetail_3954:HG4_PB_SVrefine2Falcon1Dovetail_4899:HG3_PB_SVrefine2PBcRDovetail_3673:HG3_PB_SVrefine2Falcon1Dovetail_4827:HG2_PB_SVrefine2PB10Xhap12_5803:HG2_PB_SVrefine2Falcon2Bionano_3939;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0344828;ClusterMaxSizeDiff=0.0344828;ClusterMaxEditDist=0.245614;PBcalls=16;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-113;DistBack=8010;DistForward=-114;DistMin=-114;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=300;REFWIDENED=7:26216058-26216470;PctSeqSimilarity=0.9855;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-343;EndDistance=-343;GTMatch=1;TruScore=66;MatchId=3661.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:47:1/1:3:25:3:18:./.:0:0:0:0:0/0:10:0:./.:.:.:.:.:.
chr7	29930727	HG2_Ill_250bpfermikitraw_11024	ACGGGCCTGCCCTGTGCTCAGGTGGAGGGGGCGCGGGCCTGCCCTGTGCTCAGGTGGAGGGGGCG	A	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_11024:HG3_Ill_GATKHCSBGrefine_5438:HG3_Ill_250bpfermikitraw_10695:HG2_Ill_breakscan11_1167:HG2_Ill_GATKHCSBGrefine_5517;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11024:HG3_Ill_GATKHCSBGrefine_5438:HG3_Ill_250bpfermikitraw_10695:HG2_Ill_breakscan11_1167:HG2_Ill_GATKHCSBGrefine_5517;NumExactMatchSVs=5;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-64;DistBack=8;DistForward=5095;DistMin=8;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=32;REFWIDENED=7:29930726-29930824;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3665.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:25:0|1:25:8:4:15:./.:0:0:0:0:0/1:2:13:./.:.:.:.:.:.
chr7	73783745	HG2_Ill_SVrefine2DISCOVARplusDovetail_12147	CGCCTGTAGTCCCAGCTACTTGGGGGGCTGAGGCAGGAGGATCCTTTGAGTCCAGGAGGTTGAGGCTACAGTGAGCTATGATGGCGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACCCCATCTCTAAAAATAAATAAATAAAAATTTTTAAAATATGGCTGGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAAGCCAAGGCCAGCGGATCATTCGAGGTCAGGAGCTCCAAACCAGCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATAGTGGTGCTT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12147:HG2_PB_HySA_15164:HG4_PB_pbsv_8291:HG4_Ill_MetaSV_4962:HG2_PB_HySA_15163:HG4_Ill_GATKHCSBGrefine_5786:HG3_Ill_GATKHCSBGrefine_5610:HG2_Ill_MetaSV_4742:HG3_Ill_MetaSV_4916:HG3_PB_pbsv_8059:HG2_10X_allpass_1394:HG2_PB_pbsv_8266:HG4_PB_SVrefine2PBcRDovetail_4110:HG4_PB_SVrefine2Falcon1Dovetail_5028:HG3_PB_SVrefine2Falcon1Dovetail_5007:HG2_PB_SVrefine2PBcRplusDovetail_10325:HG2_PB_SVrefine2PB10Xhap12_6029:HG2_PB_SVrefine2Falcon2Bionano_4006:HG2_PB_SVrefine2Falcon1plusDovetail_11127;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_12147:HG4_PB_SVrefine2PBcRDovetail_4110:HG4_PB_SVrefine2Falcon1Dovetail_5028:HG3_PB_SVrefine2Falcon1Dovetail_5007:HG2_PB_SVrefine2PBcRplusDovetail_10325:HG2_PB_SVrefine2PB10Xhap12_6029:HG2_PB_SVrefine2Falcon2Bionano_4006:HG2_PB_SVrefine2Falcon1plusDovetail_11127;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0588235;ClusterMaxSizeDiff=0.0588235;ClusterMaxEditDist=0.207006;PBcalls=12;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=10;HG3count=4;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-314;DistBack=8238;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7598;REFWIDENED=7:73773985-73784059;PctSeqSimilarity=0.9323;PctSizeSimilarity=0.9427;PctRecOverlap=0;SizeDiff=18;StartDistance=-444;EndDistance=-426;GTMatch=0;TruScore=62;MatchId=3718.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:6:31:1/1:4:14:0:15:./.:0:0:0:0:0/0:52:0:0/0:38:2:.:.:.
chr7	94468912	HG3_Ill_150bpfermikitraw_10951	ATATATATAGGATATATATATGATCCATATATTATATATAGGATATATATATGATCCATATAT	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_11563:HG3_Ill_GATKHC_13793:HG3_Ill_GATKHCSBGrefine_5704:HG2_Ill_GATKHC_13815:HG2_Ill_GATKHCSBGrefine_5793:HG3_PB_pbsv_8174:HG2_PB_pbsv_8385:HG3_Ill_Krunchall_11602:HG3_Ill_150bpfermikitraw_10951:HG2_Ill_Krunchall_11880;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_11563:HG3_Ill_Krunchall_11602:HG3_Ill_150bpfermikitraw_10951:HG2_Ill_Krunchall_11880;NumExactMatchSVs=4;ClusterMaxShiftDist=0.016129;ClusterMaxSizeDiff=0.016;ClusterMaxEditDist=0.0322581;PBcalls=2;Illcalls=8;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-62;DistBack=159112;DistForward=-62;DistMin=-62;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=136;REFWIDENED=7:94468911-94469111;PctSeqSimilarity=0.9953;PctSizeSimilarity=0.9839;PctRecOverlap=0;SizeDiff=1;StartDistance=-105;EndDistance=-104;GTMatch=0;TruScore=65;MatchId=3747.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:26:0|1:28:4:6:30:./.:0:0:0:0:0/1:18:11:./.:.:.:.:.:.
chr7	138039866	HG3_10X_allpass_1751	AAGAGTAAACTCCATCTCAAAACAACAACAACAAAATCAAAATAATAGCTGGGTGCAGAGGCGTGCACTTGTAGTCCCAGCTACTGGGGAGGCTG	A	20	PASS	ClusterIDs=HG2_PB_HySA_15810:HG4_PB_SVrefine2PBcRDovetail_4285:HG4_Ill_SVrefine2DISCOVARDovetail_6318:HG2_10X_SVrefine210Xhap12_6168:HG4_Ill_Spiral_715:HG2_Ill_Spiral_615:HG3_PB_assemblyticsfalcon_25359:HG3_PB_SVrefine2Falcon1Dovetail_5263:HG4_PB_pbsv_8635:HG4_PB_HySA_12777:HG3_PB_pbsv_8408:HG2_PB_pbsv_8624:HG4_Ill_250bpfermikitraw_11870:HG3_PB_HySA_13169:HG3_Ill_GATKHCSBGrefine_5876:HG3_Ill_250bpfermikitraw_11580:HG3_10X_allpass_1751:HG2_PB_SVrefine2Falcon1plusDovetail_11323:HG2_Ill_Krunchall_12242:HG2_10X_SVrefine210Xhap12_6167;NumClusterSVs=20;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6167:HG2_Ill_Krunchall_12242:HG2_PB_SVrefine2Falcon1plusDovetail_11323:HG3_10X_allpass_1751:HG3_Ill_250bpfermikitraw_11580:HG3_Ill_GATKHCSBGrefine_5876:HG3_PB_HySA_13169:HG4_Ill_250bpfermikitraw_11870;NumExactMatchSVs=8;ClusterMaxShiftDist=0.052356;ClusterMaxSizeDiff=0.052356;ClusterMaxEditDist=0.052356;PBcalls=10;Illcalls=7;TenXcalls=3;CGcalls=0;PBexactcalls=2;Illexactcalls=4;TenXexactcalls=2;CGexactcalls=0;HG2count=7;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-94;DistBack=9621;DistForward=-94;DistMin=-94;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=96;REFWIDENED=7:138039867-138040056;PctSeqSimilarity=0.9948;PctSizeSimilarity=0.9894;PctRecOverlap=0;SizeDiff=1;StartDistance=-96;EndDistance=-95;GTMatch=0;TruScore=66;MatchId=3794.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:20:0|1:23:4:1:22:./.:0:0:0:0:0/1:23:10:./.:.:.:.:.:.
chr7	157618983	HG2_PB_pbsv_8841	CGCCATTTCCACGCGTGCTGTGCAAAGACGGCAGCACGAACACGATCGTCACAATCGCG	C	10	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_25188:HG4_PB_pbsv_8859:HG2_PB_pbsv_8841:HG2_PB_PB10Xdip_26878:HG2_PB_assemblyticsPBcR_24990;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_8841;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0833333;ClusterMaxSizeDiff=0.0813008;ClusterMaxEditDist=0.133333;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-58;DistBack=-180;DistForward=125;DistMin=-180;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=496;REFWIDENED=7:157618761-157619314;PctSeqSimilarity=0.9838;PctSizeSimilarity=0.9508;PctRecOverlap=0;SizeDiff=-3;StartDistance=93;EndDistance=90;GTMatch=0;TruScore=64;MatchId=3834.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:21:./.:22:18:5:0:./.:0:0:0:0:0/0:12:0:./.:.:.:.:.:.
chr7	157862939	HG2_PB_SVrefine2Falcon2Bionano_4327	AGAGGTGCTCATGGTGATGGAGGTGCTCATGGTGGAGGTGCTCGTGGTGGTGGAGGTGCTCCTGGTGGTGGAGGTGCTCGTGGTGTGGAGGTGCCCGTGGTGGTGGAGGTGCCCCTGGTGGTGGAGGTGCCCGTGGTGGTGGAGGTGCTCGTGGTGGTGGACGTGCTCGTGGTGGTGGTGCTCGTGGTGGTGGAGGTGCCCGTGGTGGTGGAGGTGCCCGTGGTGGTG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_4327:HG4_PB_SVrefine2Falcon1Dovetail_5380:HG3_PB_SVrefine2Falcon1Dovetail_5409:HG4_PB_SVrefine2PBcRDovetail_4407;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_4327:HG4_PB_SVrefine2PBcRDovetail_4407;NumExactMatchSVs=2;ClusterMaxShiftDist=0.146341;ClusterMaxSizeDiff=0.146341;ClusterMaxEditDist=0.146341;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-227;DistBack=9944;DistForward=35;DistMin=35;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1658;REFWIDENED=7:157862940-157864824;PctSeqSimilarity=0.9176;PctSizeSimilarity=0.7721;PctRecOverlap=0;SizeDiff=-67;StartDistance=-1373;EndDistance=-1440;GTMatch=0;TruScore=56;MatchId=3836.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:45:17:./.:9:14:38:3:./.:0:0:0:0:0/0:22:0:./.:.:.:.:.:.
chr7	158521750	HG3_PB_SVrefine2Falcon1Dovetail_5446	AGCAAGTGTGGAGGTGGGTGGGGCAGGAGCAGGTGTGGATGTGCTGGAGGGGAGGGGCAGACGTGGAGGTGCTGGGGGGAGGAGCAAGCATGGAGGTGGGGAGGTTGGAGCAAGTGTGGAGGTGGGGGGATTGGAGCAAATGTGGATGTGCTGCGGGGGAAGAGCAAGCGTGGAGGTGGGGGGGGAGGAGCAAATGTGGAGGTGCTGGGGGGAGGAGCAGGTGTGGAGATAGTGGGGGAAGAGCAAGCGTGGAGGTGTTGGGAGAAGCAAGTGTGGATGT	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_6535:HG4_PB_SVrefine2PBcRDovetail_4426:HG2_PB_pbsv_8929:HG4_PB_pbsv_8960:HG2_PB_SVrefine2PB10Xhap12_6536:HG3_PB_SVrefine2Falcon1Dovetail_5446:HG2_PB_SVrefine2PBcRplusDovetail_10701;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6535:HG3_PB_SVrefine2Falcon1Dovetail_5446:HG2_PB_SVrefine2PBcRplusDovetail_10701;NumExactMatchSVs=3;ClusterMaxShiftDist=0.104895;ClusterMaxSizeDiff=0.104895;ClusterMaxEditDist=0.105263;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-279;DistBack=6830;DistForward=-138;DistMin=-138;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=107;REFWIDENED=7:158521710-158522095;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3848.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:25:0|1:15:1:6:22:./.:0:0:0:0:./.:4:0:./.:.:.:.:.:.
chr7	158631690	HG2_PB_assemblyticsPBcR_25068	GTGACTCCGTAACACCTGACTGCAAAACCTAAAGAGGATGCTAATGTGACTCCGTAACACCTGACTGCAAAACCTAAAGAGGATGCTAATG	A	20	PASS	ClusterIDs=HG2_PB_pbsv_8939:HG3_PB_assemblyticsfalcon_25719:HG3_PB_SVrefine2PBcRDovetail_4030:HG3_PB_SVrefine2Falcon1Dovetail_5452:HG3_Ill_SVrefine2DISCOVARDovetail_6637:HG2_PB_assemblyticsPBcR_25068:HG2_PB_SVrefine2PBcRplusDovetail_10704:HG2_PB_SVrefine2PB10Xhap12_6542:HG3_PB_pbsv_8727;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6542:HG2_PB_SVrefine2PBcRplusDovetail_10704:HG2_PB_assemblyticsPBcR_25068:HG3_Ill_SVrefine2DISCOVARDovetail_6637:HG3_PB_SVrefine2Falcon1Dovetail_5452:HG3_PB_SVrefine2PBcRDovetail_4030:HG3_PB_assemblyticsfalcon_25719;NumExactMatchSVs=7;ClusterMaxShiftDist=0.021978;ClusterMaxSizeDiff=0.021978;ClusterMaxEditDist=0.0659341;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-90;DistBack=-55;DistForward=132;DistMin=-55;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=593;REFWIDENED=7:158631277-158631959;PctSeqSimilarity=0.9971;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=172;EndDistance=172;GTMatch=0;TruScore=66;MatchId=3850.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:41:1|0:5:40:15:2:./.:0:0:0:0:./.:1:1:./.:.:.:.:.:.
chr8	832619	HG2_PB_SVrefine2PB10Xhap12_6574	CCCTGCGCGCACCCTCGCCTGATCCAGCGGTACCTCTCCCTGCGGAGGCCTCCCCTGCGCGCACCCTCGCCTGATCCAGCGGTACCTCTCCCTGCGGAGGCCTCT	C	10	PASS	ClusterIDs=HG3_PB_pbsv_8784:HG3_PB_assemblyticsfalcon_25778:HG3_PB_SVrefine2Falcon1Dovetail_5495:HG2_PB_assemblyticsPBcR_25107:HG2_PB_SVrefine2PBcRplusDovetail_10727:HG2_PB_SVrefine2PB10Xhap12_6574:HG4_PB_pbsv_9028:HG2_PB_pbsv_8998;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_6574:HG2_PB_SVrefine2PBcRplusDovetail_10727:HG2_PB_assemblyticsPBcR_25107;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0943396;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-104;DistBack=354;DistForward=-105;DistMin=-105;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=471;REFWIDENED=8:832242-832816;PctSeqSimilarity=0.9876;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=282;EndDistance=282;GTMatch=0;TruScore=66;MatchId=3856.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:30:0|1:23:2:4:30:./.:0:0:0:0:0/1:5:4:./.:.:.:.:.:.
chr8	1822739	HG2_PB_SVrefine2PB10Xhap12_6630	TCTGGAGGGACAGTCCAGATACATACCGGGGTGTGTAGCGGGTGGAGGTTCTAAGACAGGCTGGAGGAACAGTGCAGACACACACCAGGGTGTGTAGGGGGTAGAGGTTCTAAGACAGTCTGGAGGGAGAGTGCAGACACACACCGGGGTGTGTAAGCAGTGGAGGTTCTAAGACAGGCTGGAGGAACAGTGGAGACACACACCAGGGCGTGTAGGGGGTAGAGGTTCTAAGACAGG	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_6456:HG2_PB_assemblyticsfalcon_25979:HG2_PB_pbsv_9085:HG3_PB_pbsv_8865:HG2_PB_SVrefine2Falcon1plusDovetail_11585:HG4_PB_SVrefine2Falcon1Dovetail_5525:HG4_Ill_SVrefine2DISCOVARDovetail_6470:HG3_PB_SVrefine2PBcRDovetail_4077:HG3_Ill_SVrefine2DISCOVARDovetail_6666:HG2_PB_SVrefine2PB10Xhap12_6630:HG2_PB_SVrefine2Falcon2Bionano_4426;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_6456:HG4_PB_SVrefine2Falcon1Dovetail_5525:HG4_Ill_SVrefine2DISCOVARDovetail_6470:HG3_PB_SVrefine2PBcRDovetail_4077:HG3_Ill_SVrefine2DISCOVARDovetail_6666:HG2_PB_SVrefine2PB10Xhap12_6630:HG2_PB_SVrefine2Falcon2Bionano_4426;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0127389;ClusterMaxSizeDiff=0.0127389;ClusterMaxEditDist=0.152866;PBcalls=8;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-236;DistBack=-118;DistForward=-120;DistMin=-120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=497;REFWIDENED=8:1822740-1823472;PctSeqSimilarity=0.9451;PctSizeSimilarity=0.9958;PctRecOverlap=0;SizeDiff=1;StartDistance=-309;EndDistance=-308;GTMatch=0;TruScore=64;MatchId=3869.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:24:0|1:16:0:1:25:./.:0:0:0:0:0/0:37:0:./.:.:.:.:.:.
chr8	1938340	HG4_PB_SVrefine2PBcRDovetail_4501	GCCTGTCTGGGTAGATGCTGGGCCTTGGCGCCCTGTCCAGGTGGGTGCTGGGCCTTGGTGCCCTGTCTGGGTAGATGCTGGGCCTTGGCGCCCTGTCTGGGTAGATGCTGCTGGGCCTTGGTGCCCTGTCCGGGTGGGTACTGGGCCTTGGTGCCCTGTCTGGGTAGATGCTGGGCCTTGGCGC	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11592:HG2_PB_pbsv_9096:HG3_PB_pbsv_8877:HG4_PB_pbsv_9125:HG4_PB_SVrefine2PBcRDovetail_4501:HG4_PB_SVrefine2Falcon1Dovetail_5531:HG3_PB_SVrefine2Falcon1Dovetail_5560:HG2_PB_SVrefine2PBcRplusDovetail_10781:HG2_PB_SVrefine2PB10Xhap12_6640:HG2_PB_SVrefine2Falcon2Bionano_4433;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11592:HG4_PB_SVrefine2PBcRDovetail_4501:HG4_PB_SVrefine2Falcon1Dovetail_5531:HG3_PB_SVrefine2Falcon1Dovetail_5560:HG2_PB_SVrefine2PBcRplusDovetail_10781:HG2_PB_SVrefine2PB10Xhap12_6640:HG2_PB_SVrefine2Falcon2Bionano_4433;NumExactMatchSVs=7;ClusterMaxShiftDist=0.078534;ClusterMaxSizeDiff=0.0732984;ClusterMaxEditDist=0.188482;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-183;DistBack=20473;DistForward=-184;DistMin=-184;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=795;REFWIDENED=8:1938341-1939318;PctSeqSimilarity=0.9669;PctSizeSimilarity=0.9242;PctRecOverlap=0;SizeDiff=-15;StartDistance=-626;EndDistance=-641;GTMatch=0;TruScore=63;MatchId=3871.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:15:46:1/1:1:8:0:14:./.:0:0:0:0:0/0:27:0:./.:.:.:.:.:.
chr8	9113941	HG3_Ill_150bpfermikitraw_11655	TTTTCTCTCTTTCTCTCTCTTTCTCTCTTTCTCTCTCTTTCTCTCTCTTTCTCTCTC	T	10	PASS	ClusterIDs=HG2_Ill_svaba_11492:HG4_Ill_manta_2230:HG4_Ill_250bpfermikitraw_12294:HG3_Ill_manta_2124:HG3_Ill_250bpfermikitraw_11998:HG3_Ill_150bpfermikitraw_11655:HG2_Ill_250bpfermikitraw_12335:HG4_Ill_svaba_11608:HG3_Ill_svaba_11599;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_250bpfermikitraw_12335:HG3_Ill_150bpfermikitraw_11655:HG3_Ill_250bpfermikitraw_11998:HG3_Ill_manta_2124:HG4_Ill_250bpfermikitraw_12294:HG4_Ill_manta_2230;NumExactMatchSVs=6;ClusterMaxShiftDist=0.192308;ClusterMaxSizeDiff=0.192308;ClusterMaxEditDist=0.192308;PBcalls=0;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-56;DistBack=-5;DistForward=5984;DistMin=-5;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=9;REFWIDENED=8:9113940-9114007;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=3896.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:34:./.:13:16:4:12:./.:0:0:0:0:0/1:10:25:./.:.:.:4167043:.:.
chr8	85948910	HG2_PB_pbsv_9578	AAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_11892:HG3_Ill_GATKHCSBGrefine_6430:HG3_Ill_250bpfermikitraw_12590:HG2_PB_pbsv_9578:HG3_PB_pbsv_9331;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_9578;NumExactMatchSVs=1;ClusterMaxShiftDist=0.181818;ClusterMaxSizeDiff=0.181818;ClusterMaxEditDist=0.181818;PBcalls=3;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-55;DistBack=44217;DistForward=76;DistMin=76;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=158;REFWIDENED=8:85948891-85949103;PctSeqSimilarity=0.9701;PctSizeSimilarity=0.9322;PctRecOverlap=0;SizeDiff=-4;StartDistance=-64;EndDistance=-68;GTMatch=0;TruScore=63;MatchId=4004.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:21:45:./.:17:6:4:39:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr8	139071806	HG2_PB_SVrefine2Falcon1plusDovetail_12071	CTAGAACCTTATATTTAACTAGGACCAAATCTCACCAGCTAGAACCTTATATTTAACTAGGACCAAATCTCACCAGCTAGAACCTTATATTTAACTGGGACCAAATCTCACCAGC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_6020:HG2_PB_assemblyticsfalcon_27153:HG3_PB_SVrefine2PBcRDovetail_4506:HG3_Ill_SVrefine2DISCOVARDovetail_7366:HG2_PB_SVrefine2Falcon2Bionano_4619:HG2_PB_SVrefine2Falcon1plusDovetail_12071:HG2_Ill_SVrefine2DISCOVARplusDovetail_13254:HG3_Ill_GATKHCSBGrefine_6636:HG2_Ill_GATKHC_16014:HG2_Ill_GATKHCSBGrefine_6737:HG2_PB_pbsv_9842:HG3_PB_pbsv_9586;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_13254:HG2_PB_SVrefine2Falcon1plusDovetail_12071:HG2_PB_SVrefine2Falcon2Bionano_4619:HG3_Ill_SVrefine2DISCOVARDovetail_7366:HG3_PB_SVrefine2PBcRDovetail_4506;NumExactMatchSVs=5;ClusterMaxShiftDist=0.00877193;ClusterMaxSizeDiff=0.00873362;ClusterMaxEditDist=0.104803;PBcalls=7;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-114;DistBack=13;DistForward=6622;DistMin=13;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=306;REFWIDENED=8:139071564-139071983;PctSeqSimilarity=0.9808;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=207;EndDistance=207;GTMatch=0;TruScore=66;MatchId=4086.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:27:0|1:26:0:1:32:./.:0:0:0:0:0/0:46:0:./.:.:.:.:.:.
chr8	140760538	HG2_PB_SVrefine2Falcon1plusDovetail_12085	TCCTGGGGTCAGAGCAGGTGGGAGGTGTGCAGGGATCAGAGAAGATGCAGGGGGTACACACAGCAGGAGTCAGAGCAGGTAGGGGGGCGTACAGGGGTCAGAGCAGGTGTGGGGGCTGTG	T	10	PASS	ClusterIDs=HG2_PB_pbsv_9860:HG2_PB_assemblyticsPBcR_26439:HG2_PB_assemblyticsfalcon_27182:HG2_PB_SVrefine2Falcon1plusDovetail_12085:HG2_PB_SVrefine2PBcRplusDovetail_11295:HG2_PB_SVrefine2PB10Xhap12_7174:HG4_PB_pbsv_9878;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12085:HG2_PB_assemblyticsfalcon_27182;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0168776;ClusterMaxSizeDiff=0.0168067;ClusterMaxEditDist=0.23431;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-119;DistBack=0;DistForward=80;DistMin=0;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1046;REFWIDENED=8:140759654-140760818;PctSeqSimilarity=0.9721;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=393;EndDistance=393;GTMatch=0;TruScore=65;MatchId=4090.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:19:./.:12:6:5:12:./.:0:0:0:0:./.:2:0:./.:.:.:.:.:.
chr8	140971176	HG3_PB_SVrefine2Falcon1Dovetail_6037	AGAGCACTGCATTCCGAGTCACACAGAGGAGCACTGCATTCCGAGTCACACAGGG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_7178:HG2_PB_assemblyticsfalcon_27185:HG4_PB_pbsv_9883:HG2_PB_pbsv_9864:HG3_PB_pbsv_9602:HG4_PB_SVrefine2Falcon1Dovetail_6063:HG3_PB_SVrefine2PBcRDovetail_4519:HG3_PB_SVrefine2Falcon1Dovetail_6037:HG2_PB_SVrefine2PBcRplusDovetail_11297;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_7178:HG4_PB_SVrefine2Falcon1Dovetail_6063:HG3_PB_SVrefine2PBcRDovetail_4519:HG3_PB_SVrefine2Falcon1Dovetail_6037:HG2_PB_SVrefine2PBcRplusDovetail_11297;NumExactMatchSVs=5;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.0363636;ClusterMaxEditDist=0.181818;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-54;DistBack=10969;DistForward=23;DistMin=23;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=4765;REFWIDENED=8:140971177-140975995;PctSeqSimilarity=0.9731;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-166;EndDistance=-166;GTMatch=0;TruScore=65;MatchId=4091.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:4:32:1/1:1:14:2:11:./.:0:0:0:0:./.:11:1:./.:.:.:.:.:.
chr8	141632352	HG2_PB_SVrefine2Falcon1plusDovetail_12097	TTAATCCACATGGGGTCTCCTCTTGGGGGAATAATGCACATGGGGTCTCCTCTTGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAA	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12097:HG4_PB_assemblyticsfalcon_26616:HG4_PB_SVrefine2Falcon1Dovetail_6069:HG4_PB_pbsv_9894:HG3_PB_SVrefine2PBcRDovetail_4525:HG4_PB_SVrefine2PBcRDovetail_4952:HG3_PB_pbsv_9611:HG3_PB_SVrefine2Falcon1Dovetail_6045:HG2_PB_pbsv_9875:HG2_PB_SVrefine2PBcRplusDovetail_11307:HG2_PB_SVrefine2PB10Xhap12_7188:HG2_PB_SVrefine2Falcon2Bionano_4638;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12097:HG4_PB_SVrefine2PBcRDovetail_4952:HG3_PB_pbsv_9611:HG3_PB_SVrefine2Falcon1Dovetail_6045:HG2_PB_pbsv_9875:HG2_PB_SVrefine2PBcRplusDovetail_11307:HG2_PB_SVrefine2PB10Xhap12_7188:HG2_PB_SVrefine2Falcon2Bionano_4638;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0825566;ClusterMaxSizeDiff=0.0825566;ClusterMaxEditDist=0.119522;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=4;NumTechs=1;NumTechsExact=1;SVLEN=-360;DistBack=10012;DistForward=-361;DistMin=-361;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=544;REFWIDENED=8:141632353-141633226;PctSeqSimilarity=0.9874;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-671;EndDistance=-671;GTMatch=0;TruScore=66;MatchId=4094.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:4:52:1/1:2:20:2:13:./.:0:0:0:0:./.:10:1:./.:5:2:.:.:.
chr8	142819484	HG2_Ill_250bpfermikitraw_13460	GGGGGGAGATGGAACTGCTGCGCTGGGCTGTCCGCCTGTGCCGCGGACCCAGGAGCCCCGGGGGGAGA	G	20	PASS	ClusterIDs=HG2_PB_pbsv_9898:HG2_PB_PB10Xdip_29603:HG3_Ill_Krunchall_13450:HG3_PB_pbsv_9630:HG3_Ill_250bpfermikitraw_13061:HG2_Ill_250bpfermikitraw_13460:HG2_Ill_breakscan11_1434;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_250bpfermikitraw_13460:HG3_Ill_250bpfermikitraw_13061;NumExactMatchSVs=2;ClusterMaxShiftDist=0.229508;ClusterMaxSizeDiff=0.229508;ClusterMaxEditDist=0.229508;PBcalls=3;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-67;DistBack=-68;DistForward=-9;DistMin=-68;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=8:142819483-142819552;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=4096.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:19:./.:0:0:0:0:./.:0:0:0:0:0/1:13:4:./.:.:.:.:.:.
chr8	143858726	HG2_PB_SVrefine2PBcRplusDovetail_11342	CCAGGCCTGCCCCGGCCCCACCTCCTGAGCAACCCCCCGAGCCGAGCTCACCGCAGGCCCCGCCCCGGACCCGCCTCCTGGGCTACTCACCAAGCCGCGCTCACTG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7105:HG3_PB_assemblyticsfalcon_27174:HG4_Ill_GATKHCSBGrefine_6898:HG3_Ill_GATKHCSBGrefine_6670:HG2_Ill_GATKHCSBGrefine_6768:HG3_PB_SVrefine2Falcon1Dovetail_6081:HG3_Ill_250bpfermikitraw_13094:HG3_Ill_150bpfermikitraw_12690:HG2_PB_SVrefine2PB10Xhap12_7237:HG2_Ill_SVrefine2DISCOVARplusDovetail_13292:HG2_Ill_250bpfermikitraw_13485:HG2_Ill_150bpfermikitraw_12660:HG2_PB_PB10Xdip_29649:HG2_Ill_manta_2847:HG3_Ill_MetaSV_5425:HG2_10X_SVrefine210Xhap12_7106:HG3_PB_HySA_14878:HG2_PB_HySA_17909:HG4_PB_pbsv_9962:HG3_PB_pbsv_9665:HG2_PB_pbsv_9940:HG3_PB_SVrefine2PBcRDovetail_4551:HG3_Ill_SVrefine2DISCOVARDovetail_7402:HG2_PB_SVrefine2PBcRplusDovetail_11342:HG2_PB_SVrefine2PB10Xhap12_7236:HG2_PB_SVrefine2Falcon2Bionano_4674:HG2_PB_SVrefine2Falcon1plusDovetail_12137:HG2_Ill_SVrefine2DISCOVARplusDovetail_13291;NumClusterSVs=28;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7105:HG3_PB_SVrefine2PBcRDovetail_4551:HG3_Ill_SVrefine2DISCOVARDovetail_7402:HG2_PB_SVrefine2PBcRplusDovetail_11342:HG2_PB_SVrefine2PB10Xhap12_7236:HG2_PB_SVrefine2Falcon2Bionano_4674:HG2_PB_SVrefine2Falcon1plusDovetail_12137:HG2_Ill_SVrefine2DISCOVARplusDovetail_13291;NumExactMatchSVs=8;ClusterMaxShiftDist=0.128079;ClusterMaxSizeDiff=0.128079;ClusterMaxEditDist=0.28125;PBcalls=14;Illcalls=12;TenXcalls=2;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=16;HG3count=10;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-105;DistBack=7755;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=228;REFWIDENED=8:143858727-143859059;PctSeqSimilarity=0.93;PctSizeSimilarity=0.9905;PctRecOverlap=0;SizeDiff=1;StartDistance=-121;EndDistance=-120;GTMatch=0;TruScore=64;MatchId=4103.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:45:./.:0:0:0:0:./.:0:0:0:0:0/1:17:2:./.:.:.:.:.:.
chr8	143979719	HG3_PB_assemblyticsfalcon_27176	CCGAAAACAGGCCCAAACTGCAAAGACAAAGACAGTGTTGGCTGTGTCTACA	C	10	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_27176:HG2_PB_pbsv_9942:HG3_PB_pbsv_9667:HG4_PB_pbsv_9964:HG4_PB_assemblyticsfalcon_26688;NumClusterSVs=5;ExactMatchIDs=HG3_PB_assemblyticsfalcon_27176:HG4_PB_assemblyticsfalcon_26688;NumExactMatchSVs=2;ClusterMaxShiftDist=0.163636;ClusterMaxSizeDiff=0.126126;ClusterMaxEditDist=0.218182;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-51;DistBack=-218;DistForward=-49;DistMin=-218;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=549;REFWIDENED=8:143979517-143980116;PctSeqSimilarity=0.9254;PctSizeSimilarity=0.8644;PctRecOverlap=0;SizeDiff=-8;StartDistance=-62;EndDistance=-70;GTMatch=0;TruScore=59;MatchId=4104.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:30:0|1:25:2:7:40:./.:0:0:0:0:./.:5:0:./.:.:.:.:.:.
chr9	17765225	HG2_PB_assemblyticsPBcR_26768	CGGGTGCTTGCTGGCTTTCACATCTTGGGTTCATGGACAGGCCAGGGGAATCAGTAGGATTTGATGCTTCGAGGGTACTTTGGGAGTACATCTGTATTAGATTACTGCTCCT	C	10	PASS	ClusterIDs=HG2_PB_HySA_18244:HG4_PB_assemblyticsfalcon_26943:HG4_PB_SVrefine2Falcon1Dovetail_6216:HG3_PB_assemblyticsfalcon_27430:HG3_PB_SVrefine2PBcRDovetail_4658:HG2_PB_assemblyticsfalcon_27500:HG2_PB_assemblyticsPBcR_26768:HG2_PB_SVrefine2PBcRplusDovetail_11469:HG2_PB_SVrefine2PB10Xhap12_7395:HG2_PB_SVrefine2Falcon2Bionano_4787:HG2_PB_SVrefine2Falcon1plusDovetail_12264:HG2_PB_pbsv_10118:HG3_PB_pbsv_9851:HG4_PB_pbsv_10144:HG3_PB_HySA_15142;NumClusterSVs=15;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12264:HG2_PB_SVrefine2Falcon2Bionano_4787:HG2_PB_SVrefine2PB10Xhap12_7395:HG2_PB_SVrefine2PBcRplusDovetail_11469:HG2_PB_assemblyticsPBcR_26768:HG2_PB_assemblyticsfalcon_27500:HG3_PB_SVrefine2PBcRDovetail_4658:HG3_PB_assemblyticsfalcon_27430:HG4_PB_SVrefine2Falcon1Dovetail_6216:HG4_PB_assemblyticsfalcon_26943;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0273973;ClusterMaxSizeDiff=0.0271493;ClusterMaxEditDist=0.108597;PBcalls=15;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=10;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-111;DistBack=285;DistForward=54220;DistMin=285;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=666;REFWIDENED=9:17764588-17765364;PctSeqSimilarity=0.9912;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=397;EndDistance=397;GTMatch=0;TruScore=66;MatchId=4140.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:48:./.:0:3:0:8:./.:0:0:0:0:0/1:7:5:./.:.:.:.:.:.
chr9	88722221	HG4_PB_SVrefine2Falcon1Dovetail_6354	AGTTCAACTACACGGTTTGACAGAAGAACTAAGAACTAGTAATTGATAGACCAGTAGGGTGACTACAGTTTACAGTAGTTTATTGTATGTTTCAAATAGCTAGAAGACAATAATTTGAATGTGTTCCTAGCACAAAGAGAAGACAAATATTTAATGTGATAGATATTCTAATCACACTGATTTAATCTTTAGAAATATATGAATGTTCAACTACACGGTTTGACAGAAGAACTAAGAACTAGTAATTGATAGACCAGTAGGGTGACTACAGTTTACAGTAGTTTATTGTATATTTCAAATAGCTAGAAGACAATAATTTGAATGTGTTCCTAGCACAAAGAGAAGACAAATATTTAATGTGATAGATATTCTAATCACACTGATTTAATCTTTAGAAATATATGAATGTTCAACTACACGGTTTGACAGAAGAACTAAGAACTAGTAATTGATAGACCAGTAGGGTGACTACAGTTTACAGTAGTTTATTGTATATTTCAAATAGCTAGAAGACAATAATTTGAATGTGTTCCTAGCACAAAGAGAAGACAAATATTTAATGTGATAGATATTCTAATCACACTGATTTAATCTTTAGAAATATATGAATGTTCAACTACACGGTTTGACAGAAGAACTAAGAACTAGTAATTGATAGACCAGTAGGGTGACTACAGTTTACAGTAGTTTATTGTATATTTCAAATAGCTAGAAGACAATAATTTGAATGTGTTCCTAGCACAAAGAGAAGACAAATATTTAATGTGATAGATATTCTAATCACACTGATTTAATCTTTAGAAATATATGAATGTTCAACTACACGGTTTGACAGAAGAACTAAGAACTAGTAATTGATAGACCAGTAGGGTGACTACAGTTTACAGTAGTTTATTGTATGTTTCAAATAGCTAGAAGACAATAATTTGAATGTGTTCCTAGCACAAAGAGAAGACAAATATTTAATGTGATAGATATTCTAATCACACTGATTTAATCTTTAGAAATATATGAAT	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12421:HG4_Ill_MetaSV_5624:HG2_Ill_MetaSV_5387:HG2_PB_pbsv_10358:HG3_PB_pbsv_10103:HG4_PB_pbsv_10383:HG4_PB_SVrefine2PBcRDovetail_5198:HG4_PB_SVrefine2Falcon1Dovetail_6354:HG3_PB_SVrefine2PBcRDovetail_4801:HG2_PB_SVrefine2PBcRplusDovetail_11619:HG2_PB_SVrefine2PB10Xhap12_7580:HG2_PB_SVrefine2Falcon2Bionano_4904;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12421:HG4_PB_SVrefine2PBcRDovetail_5198:HG4_PB_SVrefine2Falcon1Dovetail_6354:HG3_PB_SVrefine2PBcRDovetail_4801:HG2_PB_SVrefine2PBcRplusDovetail_11619:HG2_PB_SVrefine2PB10Xhap12_7580:HG2_PB_SVrefine2Falcon2Bionano_4904;NumExactMatchSVs=7;ClusterMaxShiftDist=0.00197141;ClusterMaxSizeDiff=0.00197044;ClusterMaxEditDist=0.00295712;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-1015;DistBack=-610;DistForward=-1016;DistMin=-1016;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1418;REFWIDENED=9:88722222-88724654;PctSeqSimilarity=0.9948;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-1153;EndDistance=-1153;GTMatch=1;TruScore=66;MatchId=4205.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:8:47:1/1:4:15:6:23:./.:0:0:0:0:./.:0:4:1/1:1:46:.:.:.
chr9	116215390	HG4_PB_SVrefine2Falcon1Dovetail_6466	CATACTCATTATATGATTATATAATATACTCATATGATTATATAATATACTCATATGATTATATAATATACTCATTATATGATTACATAATATACTCATTATATGATTACATAATATACTCATTATATGATTACATAATATACTCATTATATGATTACATAAT	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12530:HG4_PB_pbsv_10559:HG2_PB_pbsv_10519:HG3_PB_pbsv_10262:HG2_PB_SVrefine2PBcRplusDovetail_11723:HG4_PB_SVrefine2PBcRDovetail_5299:HG3_PB_SVrefine2PBcRDovetail_4900:HG3_PB_SVrefine2Falcon1Dovetail_6372:HG4_PB_SVrefine2Falcon1Dovetail_6466:HG2_PB_SVrefine2PB10Xhap12_7702:HG2_PB_SVrefine2Falcon2Bionano_5004;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12530:HG4_PB_SVrefine2Falcon1Dovetail_6466:HG2_PB_SVrefine2PB10Xhap12_7702:HG2_PB_SVrefine2Falcon2Bionano_5004;NumExactMatchSVs=4;ClusterMaxShiftDist=0.256684;ClusterMaxSizeDiff=0.256684;ClusterMaxEditDist=0.256684;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-162;DistBack=-323;DistForward=-112;DistMin=-323;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=541;REFWIDENED=9:116215391-116216093;PctSeqSimilarity=0.9622;PctSizeSimilarity=0.9643;PctRecOverlap=0;SizeDiff=-6;StartDistance=-181;EndDistance=-187;GTMatch=0;TruScore=64;MatchId=4242.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:9:42:1/1:2:13:1:14:./.:0:0:0:0:0/0:39:1:./.:.:.:.:.:.
chr9	128775415	HG2_PB_SVrefine2PBcRplusDovetail_11761	ACTCAGTAAATGTGTATGGAATGAATGAAGAGGTGAATGAATGGGTGGATGAGTGCATCTCAGTAAATGTGTATGGAGGGAATGAAGAGGTGAATGGGTGGATGAGTACATCTCAGTAAATGTGTATGGAGTGAATGAAGAGGTGAATGAATGGGTGGATGAGTGCAT	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_11761:HG2_PB_pbsv_10579:HG3_PB_pbsv_10317:HG4_PB_pbsv_10619:HG3_PB_SVrefine2PBcRDovetail_4937:HG3_PB_SVrefine2Falcon1Dovetail_6406;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_11761:HG3_PB_SVrefine2PBcRDovetail_4937:HG3_PB_SVrefine2Falcon1Dovetail_6406;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0295858;ClusterMaxSizeDiff=0.0236686;ClusterMaxEditDist=0.0710059;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-167;DistBack=-112;DistForward=-168;DistMin=-168;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1082;REFWIDENED=9:128775416-128776664;PctSeqSimilarity=0.9632;PctSizeSimilarity=0.9543;PctRecOverlap=0;SizeDiff=-8;StartDistance=-199;EndDistance=-207;GTMatch=0;TruScore=63;MatchId=4250.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:26:0|1:19:0:2:29:./.:0:0:0:0:./.:34:3:./.:.:.:.:.:.
chr9	139325624	HG2_PB_SVrefine2Falcon1plusDovetail_12670	ACCCCAGGCCCTCACCTCTCCTCATCTCCCACCACGCCCACCCTCCCCCCACCCGCCGCAGGCCCTCACCTTTCCTCATCTCCCGCCACGCCCGCCCCCCCAGGCCCTCACCTCTCCTCATCTCCCTCCACGCCCGCCCCCCAGGCCCTCACCTCTCCTCATCTCCCTCCACGCCCGCCCCCCAGGCCCTCACCTCTCCTCATCTCCCTCCACGCCCGCCCCCCCAGGCCCTCACCTCTCCTCATCTCCCTCCACGCCCGCCC	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12670:HG2_PB_SVrefine2PB10Xhap12_7853:HG2_PB_SVrefine2PB10Xhap12_7854:HG3_PB_SVrefine2PBcRDovetail_5023:HG3_PB_pbsv_10487:HG2_PB_pbsv_10746:HG2_PB_SVrefine2PBcRplusDovetail_11865;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12670:HG2_PB_SVrefine2PBcRplusDovetail_11865;NumExactMatchSVs=2;ClusterMaxShiftDist=0.331337;ClusterMaxSizeDiff=0.331337;ClusterMaxEditDist=0.343313;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-262;DistBack=-549;DistForward=-193;DistMin=-549;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=404;REFWIDENED=9:139325625-139326290;PctSeqSimilarity=0.9595;PctSizeSimilarity=0.9504;PctRecOverlap=0;SizeDiff=13;StartDistance=-302;EndDistance=-289;GTMatch=0;TruScore=63;MatchId=4277.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:31:0|1:16:1:1:31:./.:0:0:0:0:./.:10:1:./.:.:.:.:.:.
chr9	140870948	HG4_PB_SVrefine2Falcon1Dovetail_6644	TTTACCAACTTATGTAGGTAGGGAGGCCTTGGAGGCAGTGTGTTTCCCAGCTTACCATGACAGTTGAACACAGACGGCAGGGCAGGGCAGTCTGAGAATTACCAACTTATGTAGGTGGGGAGGCCTTGGAGGCAGTGTGTTTCCCAGCTTACCATGACAGCTGAGCACAGAGGGCAGGGCAGGGCAGTCTGAGAA	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12713:HG2_PB_pbsv_10809:HG4_PB_pbsv_10845:HG3_PB_pbsv_10554:HG4_PB_SVrefine2PBcRDovetail_5443:HG4_PB_SVrefine2Falcon1Dovetail_6644:HG3_PB_SVrefine2PBcRDovetail_5054:HG3_PB_SVrefine2Falcon1Dovetail_6561:HG2_PB_SVrefine2PBcRplusDovetail_11903:HG2_PB_SVrefine2PB10Xhap12_7895;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_12713:HG4_PB_SVrefine2PBcRDovetail_5443:HG4_PB_SVrefine2Falcon1Dovetail_6644:HG3_PB_SVrefine2PBcRDovetail_5054:HG3_PB_SVrefine2Falcon1Dovetail_6561:HG2_PB_SVrefine2PBcRplusDovetail_11903:HG2_PB_SVrefine2PB10Xhap12_7895;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0103359;ClusterMaxSizeDiff=0.0103093;ClusterMaxEditDist=0.0721649;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-194;DistBack=16061;DistForward=-195;DistMin=-195;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=875;REFWIDENED=9:140870949-140872017;PctSeqSimilarity=0.9872;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-505;EndDistance=-505;GTMatch=0;TruScore=66;MatchId=4282.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:32:./.:0:0:0:0:./.:0:0:0:0:0/0:34:0:./.:.:.:.:.:.
chr10	446411	HG4_PB_SVrefine2Falcon1Dovetail_6655	GTACATGTGGGGTAGCATTAGCGTTACTCTTCCTTCTGGACAAGTTTGGTACATTTTCATCAGCACATGAATCCTGTGATTTTACACGTGTGGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTACGTGTTCATCAGCACATGAATCCTGTGATTTTACATGTGGGGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTATGTGTTCATCAGCACATGAATCCTGTGATTTTACACGTGTGGTAGCATTAGCATTACTCTTCTTTATGGACAAGTTTGGTAATCCTGTGATTTTACACGTGTGGTAGCATTAGCATTACTCTTCCTTATGAACAAGTTTGGTATGTGTTCCTCACCACATGAATCCTGTGATTTTACACGTGTGGCAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTACATTTTCATCAGTACATGAATCCTATGATTTTACACGTGTGGCAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTATGTGTTCATCAGCACATGAATCCTGTGATTTTACACGTGTGGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTATGTGTTCATCAGCACATGAATCCTGTGATTTTACACGTGTGGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTATGTGTTCATCAGCACATGAATCCTGTGATTTTACATGTGTGGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTACATTTTCATCAGCCCATGAATCCTATGATTTTACATGTGGGGTAGCATTAGCATTACTCTTCCTTACGGACAAGTTTGGTATGTGTTCATCAGCACATGAATCCTATGATTTTACATGTGTGGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTCGTACATTTTCATCAGCACATGAATCCTGTGATTTTACATGTGTGGTAGCATTAGCGTTACTATTCCTTATGGACAAGTTTCGTATGTGTTCATCAGCACATGAATCCTGTGATTTTACATGTGTGGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTACATTTTCATCAGCACATGAATCCTATTTTACATGTGTGGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTACATTTTCATCAGCACATGAATCCTATGATTTTACATGTGTGGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTATGTGTTCCTCAGCACATGAATCCTGTGATTTTACACGTGTGGCAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTACATTTTCATCAGCACATGAATCCTATGATTT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_995:HG2_PB_SVrefine2PB10Xhap12_7909:HG4_PB_SVrefine2PBcRDovetail_5451:HG3_PB_pbsv_10571:HG2_PB_pbsv_10825:HG4_Ill_MetaSV_441:HG2_Ill_MetaSV_425:HG2_PB_SVrefine2PBcRplusDovetail_961:HG2_PB_SVrefine2PB10Xhap12_7908:HG4_PB_SVrefine2Falcon1Dovetail_6655:HG3_PB_SVrefine2Falcon1Dovetail_6573:HG3_Ill_SVrefine2DISCOVARDovetail_7996:HG2_PB_SVrefine2Falcon2Bionano_5181;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_995:HG4_PB_SVrefine2Falcon1Dovetail_6655:HG3_PB_SVrefine2Falcon1Dovetail_6573:HG3_Ill_SVrefine2DISCOVARDovetail_7996:HG2_PB_SVrefine2Falcon2Bionano_5181;NumExactMatchSVs=5;ClusterMaxShiftDist=0.359843;ClusterMaxSizeDiff=0.359843;ClusterMaxEditDist=0.383429;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-1355;DistBack=3613;DistForward=-113;DistMin=-113;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=293;REFWIDENED=10:446412-448059;PctSeqSimilarity=0.9752;PctSizeSimilarity=0.9862;PctRecOverlap=0;SizeDiff=-19;StartDistance=-1765;EndDistance=-1784;GTMatch=0;TruScore=65;MatchId=323.0.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:40:./.:9:15:6:24:0/0:43:1:35:0:0/0:106:0:0/1:52:52:1537:978:.
chr10	535479	HG3_Ill_SVrefine2DISCOVARDovetail_7998	TCACTAGGGAGACGGTGGCTCTGACAGTGCCTGGTGCTTCCTCCATTTCACACTAGGGACACAGTGGCTCTGACAGAGCCTGGTGCTTCCTCCATTTCACACTAGGGACACGGTGGCTCTGACGGTGCCCGGGGCTTCCTCCACTTCACACTAGGGACACGGTGGCTCTGACGGTGCCCGGGGCTTCCTCCACTTCA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1125:HG2_Ill_SpiralSDKrefine_1396:HG4_PB_pbsv_10865:HG2_PB_pbsv_10833:HG3_PB_pbsv_10576:HG2_PB_PB10Xdip_3523:HG3_PB_HySA_16354:HG4_PB_SVrefine2PBcRDovetail_5455:HG4_PB_SVrefine2Falcon1Dovetail_6660:HG4_Ill_SVrefine2DISCOVARDovetail_7798:HG3_PB_SVrefine2PBcRDovetail_5064:HG3_PB_SVrefine2Falcon1Dovetail_6580:HG3_Ill_SVrefine2DISCOVARDovetail_7998:HG2_PB_SVrefine2PB10Xhap12_7916;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1125:HG4_PB_SVrefine2PBcRDovetail_5455:HG4_PB_SVrefine2Falcon1Dovetail_6660:HG4_Ill_SVrefine2DISCOVARDovetail_7798:HG3_PB_SVrefine2PBcRDovetail_5064:HG3_PB_SVrefine2Falcon1Dovetail_6580:HG3_Ill_SVrefine2DISCOVARDovetail_7998:HG2_PB_SVrefine2PB10Xhap12_7916;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0151899;ClusterMaxSizeDiff=0.0151899;ClusterMaxEditDist=0.147583;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-196;DistBack=9512;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=494;REFWIDENED=10:535480-536169;PctSeqSimilarity=0.9565;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-321;EndDistance=-321;GTMatch=0;TruScore=65;MatchId=324.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:40:23:0|1:26:5:2:14:0/0:19:0:16:0:0/0:41:0:./.:.:.:.:.:.
chr10	10809803	HG3_Ill_GATKHC_17594	CAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAA	C	20	PASS	ClusterIDs=HG2_Ill_GATKHC_17671:HG3_PB_assemblyticsfalcon_2436:HG2_PB_pbsv_11049:HG3_PB_HySA_16642:HG3_PB_pbsv_10776:HG2_PB_SVrefine2Falcon2Bionano_5298:HG3_PB_SVrefine2PBcRDovetail_5169:HG3_Ill_SVrefine2DISCOVARDovetail_8099:HG2_PB_SVrefine2PB10Xhap12_8068:HG2_PB_PB10Xdip_2901:HG2_Ill_SVrefine2DISCOVARplusDovetail_1239:HG3_PB_SVrefine2Falcon1Dovetail_6690:HG4_PB_assemblyticsfalcon_2386:HG3_Ill_scalpel_10549:HG3_Ill_GATKHC_17594:HG3_Ill_250bpfermikitraw_14332:HG3_Ill_150bpfermikitraw_13868:HG3_10X_allpass_2189;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_GATKHC_17671:HG3_Ill_GATKHC_17594:HG3_Ill_250bpfermikitraw_14332:HG3_Ill_150bpfermikitraw_13868:HG3_10X_allpass_2189;NumExactMatchSVs=5;ClusterMaxShiftDist=0.206452;ClusterMaxSizeDiff=0.206452;ClusterMaxEditDist=0.270968;PBcalls=10;Illcalls=7;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=11;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-170;DistBack=15037;DistForward=3;DistMin=3;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=179;REFWIDENED=10:10809796-10810144;PctSeqSimilarity=0.8976;PctSizeSimilarity=0.8706;PctRecOverlap=0;SizeDiff=22;StartDistance=-176;EndDistance=-154;GTMatch=0;TruScore=58;MatchId=361.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:18:0|1:21:0:3:22:0|1:25:1:0:10:0/1:22:11:./.:.:.:.:.:.
chr10	35143672	HG2_PB_SVrefine2Falcon1plusDovetail_1226	GATTTATTATTTATTTATTTATTTTTGAGATGGAGTCTCTCTCTGTCACCCAGGCTAGAGGGCAGTGGCATAATCTCGGCTCACTGCAGCCTCTGCCTCCTGGGTTCAAGTGATTCTCTTGCCTCAGCCTCCCAAATAGCTGGGATTACAGGTGCCTGCCACTATGCCTGGCTA	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_7884:HG4_PB_assemblyticsfalcon_2616:HG2_PB_pbsv_11217:HG4_Ill_MetaSV_538:HG4_PB_pbsv_11224:HG4_PB_SVrefine2PBcRDovetail_5643:HG4_Ill_SVrefine2DISCOVARDovetail_8015:HG3_Ill_SVrefine2DISCOVARDovetail_8240:HG2_PB_SVrefine2Falcon2Bionano_5384:HG2_PB_SVrefine2Falcon1plusDovetail_1226:HG2_Ill_SVrefine2DISCOVARplusDovetail_1366;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_7884:HG4_PB_SVrefine2PBcRDovetail_5643:HG4_Ill_SVrefine2DISCOVARDovetail_8015:HG3_Ill_SVrefine2DISCOVARDovetail_8240:HG2_PB_SVrefine2Falcon2Bionano_5384:HG2_PB_SVrefine2Falcon1plusDovetail_1226:HG2_Ill_SVrefine2DISCOVARplusDovetail_1366;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0288184;ClusterMaxSizeDiff=0.0288184;ClusterMaxEditDist=0.17341;PBcalls=6;Illcalls=4;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-173;DistBack=1118;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=359;REFWIDENED=10:35143673-35144204;PctSeqSimilarity=0.9402;PctSizeSimilarity=0.9943;PctRecOverlap=0;SizeDiff=-1;StartDistance=-174;EndDistance=-175;GTMatch=0;TruScore=64;MatchId=402.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:19:0|1:21:6:3:11:0/0:22:0:15:0:0/0:43:0:./.:.:.:.:.:.
chr10	134518227	HG4_Ill_SVrefine2DISCOVARDovetail_8456	TTGGACGTGTGGGAGATGGAGGAAGGGCGTCTAGTCAGGCAGCAGGCAGCTCCTC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1808:HG2_PB_pbsv_11815:HG4_PB_assemblyticsfalcon_3519:HG3_PB_assemblyticsfalcon_3585:HG4_PB_pbsv_11806:HG3_PB_pbsv_11511:HG4_Ill_250bpfermikitraw_15674:HG4_Ill_SVrefine2DISCOVARDovetail_8456:HG2_PB_SVrefine2PB10Xhap12_8529:HG2_PB_SVrefine2Falcon2Bionano_5710;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_1808:HG4_Ill_SVrefine2DISCOVARDovetail_8456:HG2_PB_SVrefine2PB10Xhap12_8529:HG2_PB_SVrefine2Falcon2Bionano_5710;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0560748;ClusterMaxSizeDiff=0.0560748;ClusterMaxEditDist=0.220183;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=746;DistForward=-20;DistMin=-20;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=272;REFWIDENED=10:134518228-134518553;PctSeqSimilarity=0.9727;PctSizeSimilarity=0.9815;PctRecOverlap=0;SizeDiff=1;StartDistance=-146;EndDistance=-145;GTMatch=0;TruScore=65;MatchId=519.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:32:0|1:19:6:1:19:./.:5:0:20:0:0/0:34:0:./.:.:.:.:.:.
chr10	134709420	HG2_Ill_250bpfermikitraw_15830	TGAGAAGGCAGCCAGGCTCTGTGTGCCATGAGACACGGCGAGAAGGCAGCTAGGCTCTGTGTGCCATGAGACACGGC	T	10	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_15830:HG4_Ill_GATKHCSBGrefine_8193:HG3_Ill_250bpfermikitraw_15386:HG2_Ill_GATKHCSBGrefine_7990;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_250bpfermikitraw_15830:HG4_Ill_GATKHCSBGrefine_8193:HG3_Ill_250bpfermikitraw_15386:HG2_Ill_GATKHCSBGrefine_7990;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-76;DistBack=7091;DistForward=-50;DistMin=-50;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=77;REFWIDENED=10:134709396-134709548;PctSeqSimilarity=0.7143;PctSizeSimilarity=0.4737;PctRecOverlap=0.4805;SizeDiff=40;StartDistance=-27;EndDistance=13;GTMatch=1;TruScore=55;MatchId=522.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:45:1|0:13:43:9:3:./.:1:9:1:3:0/1:3:14:./.:.:.:.:.:.
chr11	9000270	HG3_PB_SVrefine2Falcon1Dovetail_7312	TGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGG	GA	10	PASS	ClusterIDs=HG4_PB_pbsv_12044:HG4_PB_SVrefine2PBcRDovetail_6051:HG3_PB_SVrefine2Falcon1Dovetail_7312:HG2_PB_SVrefine2Falcon2Bionano_5850:HG4_PB_assemblyticsfalcon_3793:HG3_PB_assemblyticsfalcon_3874:HG3_PB_SVrefine2PBcRDovetail_5644:HG3_PB_pbsv_11754:HG2_PB_pbsv_12074;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_5850:HG3_PB_SVrefine2Falcon1Dovetail_7312:HG4_PB_SVrefine2PBcRDovetail_6051;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0502513;ClusterMaxSizeDiff=0.0502513;ClusterMaxEditDist=0.119403;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=4;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-100;DistBack=74;DistForward=61595;DistMin=74;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=138;REFWIDENED=11:9000132-9000319;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=553.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:25:0|1:24:4:2:19:./.:5:0:1:0:0/0:15:0:./.:.:.:.:.:.
chr11	63638754	HG4_PB_SVrefine2PBcRDovetail_6234	TTTCACTGTGTGCAGGTGTGGCTAAAGAGTATTCACTGTGTGCAGGTGTGGGTGAAGAGTATTCACCGTGTGCAGGTGTGGCTGAAGAGTATTCACCGTGTGCAGGTGTGGCTGAAGAGTATTCACCGTGTGCAGGTGTGGCTGAAGAGTA	T	20	PASS	ClusterIDs=HG4_PB_SVrefine2PBcRDovetail_6234:HG4_PB_pbsv_12377:HG2_PB_pbsv_12397:HG2_Ill_SpiralSDKrefine_2805;NumClusterSVs=4;ExactMatchIDs=HG4_PB_SVrefine2PBcRDovetail_6234;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0133779;ClusterMaxSizeDiff=0.0133333;ClusterMaxEditDist=0.126667;PBcalls=3;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-150;DistBack=13927;DistForward=318;DistMin=318;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=480;REFWIDENED=11:63638755-63639384;PctSeqSimilarity=0.9705;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-321;EndDistance=-321;GTMatch=0;TruScore=65;MatchId=634.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:41:15:0|1:39:0:3:11:0/0:12:0:18:0:0/0:33:0:./.:.:.:.:.:.
chr11	87596057	HG2_PB_SVrefine2PB10Xhap12_9031	CTTCAGATGTACTGGGTGTGTCAGGTGTGATCCTTAGTTGCTCTGTTGCTACACTTACCACCCTGAATATTCCTGCTTCTGCTCTCTCTGCTTTGGA	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2274:HG4_PB_assemblyticsfalcon_4536:HG4_PB_SVrefine2Falcon1Dovetail_7658:HG3_PB_pbsv_12230:HG2_PB_pbsv_12541:HG4_Ill_GATKHCSBGrefine_8657:HG3_Ill_250bpfermikitraw_16244:HG4_PB_pbsv_12523:HG4_Ill_SVrefine2DISCOVARDovetail_8904:HG3_PB_SVrefine2Falcon1Dovetail_7622:HG2_PB_SVrefine2PBcRplusDovetail_1957:HG2_PB_SVrefine2PB10Xhap12_9031:HG2_PB_SVrefine2Falcon1plusDovetail_2053;NumClusterSVs=13;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_2274:HG4_Ill_SVrefine2DISCOVARDovetail_8904:HG3_PB_SVrefine2Falcon1Dovetail_7622:HG2_PB_SVrefine2PBcRplusDovetail_1957:HG2_PB_SVrefine2PB10Xhap12_9031:HG2_PB_SVrefine2Falcon1plusDovetail_2053;NumExactMatchSVs=6;ClusterMaxShiftDist=0.052356;ClusterMaxSizeDiff=0.052356;ClusterMaxEditDist=0.0744681;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-96;DistBack=6942;DistForward=-97;DistMin=-97;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=192;REFWIDENED=11:87596058-87596345;PctSeqSimilarity=0.9903;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-102;EndDistance=-102;GTMatch=0;TruScore=66;MatchId=653.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:40:0|1:30:5:6:36:./.:6:2:13:0:0/1:21:7:./.:.:.:.:.:.
chr11	134327192	HG2_PB_SVrefine2PB10Xhap12_9243	GTGTGCTGTCATACCACCCTTGCATAAGGTCTCTGTCTCTGTGCTGTCACACCACCCTTGCCTAAGGCCTCTGTCTCTGTGCTGTCACACCATTCTTGCCTAAGGCCTCTGTCTCTGTGCTATCACACCATCCTTGCCTAAGGCCTCTGTCTCTGTGCTGTATCACACCATCCTTGCCTAAGGCCTCTGTCTCTGTGCTATCACACCATCCTTGCCTAAGGCCTCTTTCTC	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2240:HG3_PB_HySA_19349:HG2_PB_pbsv_12814:HG3_PB_pbsv_12497:HG4_PB_SVrefine2Falcon1Dovetail_7839:HG3_PB_SVrefine2PBcRDovetail_6043:HG3_PB_SVrefine2Falcon1Dovetail_7802:HG2_PB_SVrefine2PBcRplusDovetail_2135:HG2_PB_SVrefine2PB10Xhap12_9243:HG2_PB_SVrefine2Falcon2Bionano_6298;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2240:HG4_PB_SVrefine2Falcon1Dovetail_7839:HG3_PB_SVrefine2PBcRDovetail_6043:HG3_PB_SVrefine2Falcon1Dovetail_7802:HG2_PB_SVrefine2PBcRplusDovetail_2135:HG2_PB_SVrefine2PB10Xhap12_9243:HG2_PB_SVrefine2Falcon2Bionano_6298;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0087146;ClusterMaxSizeDiff=0.00869565;ClusterMaxEditDist=0.0782609;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-230;DistBack=-231;DistForward=-231;DistMin=-231;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=464;REFWIDENED=11:134327193-134327886;PctSeqSimilarity=0.972;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-303;EndDistance=-303;GTMatch=0;TruScore=65;MatchId=702.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:24:0|1:33:3:5:21:0/0:20:0:24:1:0/0:47:0:./.:.:.:.:.:.
chr12	260023	HG2_10X_SVrefine210Xhap12_8980	TTGGGTGCTCCTGAGGATGATTCAGTAGAGGGGAGGCGTGGTAGCTATCTGAAAGAACACCTCAAACTTCGTGTGCCCCAAGATGGAGACTCCGTCTCTCCAGCATGTGTCTGCACCATGATACACTCACACTAGAGAACGGTACCTCCAGGCCCC	T	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_8980:HG4_PB_SVrefine2Falcon1Dovetail_7866:HG2_PB_SVrefine2Falcon2Bionano_6317:HG4_PB_assemblyticsfalcon_5012:HG2_PB_pbsv_12849:HG4_PB_pbsv_12834:HG2_PB_PB10Xdip_6973:HG4_Ill_MetaSV_976:HG4_PB_SVrefine2PBcRDovetail_6496:HG3_PB_SVrefine2Falcon1Dovetail_7825:HG2_PB_SVrefine2PB10Xhap12_9269;NumClusterSVs=11;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_8980:HG4_PB_SVrefine2PBcRDovetail_6496:HG3_PB_SVrefine2Falcon1Dovetail_7825:HG2_PB_SVrefine2PB10Xhap12_9269;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0190476;ClusterMaxSizeDiff=0.0190476;ClusterMaxEditDist=0.0825397;PBcalls=9;Illcalls=1;TenXcalls=1;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=5;NumTechs=3;NumTechsExact=2;SVLEN=-155;DistBack=7215;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=324;REFWIDENED=12:260024-260502;PctSeqSimilarity=0.9773;PctSizeSimilarity=0.9873;PctRecOverlap=0;SizeDiff=-2;StartDistance=-218;EndDistance=-220;GTMatch=0;TruScore=65;MatchId=706.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:41:32:0|1:29:6:6:24:0/0:18:0:15:0:0/0:41:0:./.:.:.:.:.:.
chr12	892556	HG2_PB_SVrefine2PB10Xhap12_9280	ATGCCTGAATCCCAGCACTTTGGGAGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTTGAGACCAGGCTAGGCAACAAACCAAGATGCTGTCTCCACCAAAAAAAAAACAAAACAAAAATTATCCAGGCACAGTGGCATG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2271:HG3_PB_pbsv_12553:HG4_PB_pbsv_12853:HG2_PB_pbsv_12867:HG4_PB_SVrefine2PBcRDovetail_6505:HG4_PB_SVrefine2Falcon1Dovetail_7879:HG3_PB_SVrefine2PBcRDovetail_6069:HG3_PB_SVrefine2Falcon1Dovetail_7836:HG2_PB_SVrefine2PBcRplusDovetail_2163:HG2_PB_SVrefine2PB10Xhap12_9280:HG2_PB_SVrefine2Falcon2Bionano_6326;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2271:HG4_PB_SVrefine2PBcRDovetail_6505:HG4_PB_SVrefine2Falcon1Dovetail_7879:HG3_PB_SVrefine2PBcRDovetail_6069:HG3_PB_SVrefine2Falcon1Dovetail_7836:HG2_PB_SVrefine2PBcRplusDovetail_2163:HG2_PB_SVrefine2PB10Xhap12_9280:HG2_PB_SVrefine2Falcon2Bionano_6326;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0428571;ClusterMaxSizeDiff=0.0428571;ClusterMaxEditDist=0.107143;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-142;DistBack=58429;DistForward=-143;DistMin=-143;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=392;REFWIDENED=12:892557-893090;PctSeqSimilarity=0.969;PctSizeSimilarity=0.9718;PctRecOverlap=0;SizeDiff=4;StartDistance=-243;EndDistance=-239;GTMatch=0;TruScore=64;MatchId=709.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:57:1/1:0:19:3:23:0/0:26:0:31:0:0/0:28:0:./.:.:.:.:.:.
chr12	2214720	HG4_PB_SVrefine2PBcRDovetail_6519	CGCATCGGGAAACCACTGGGCGCCCACCCCGGGGAGGGTTTCCACCTCAGCTGGGCGTCCTGAAGCCACTGGGTGCCCACCCCGGGGAGGGTTTCCACCTCAGCTGGGCATCCTGAAGCCACTGGGCGCCCACCCCGGGGAGGGTTTCCACCTCAGCTGGGCATCGTGAAGCCACTGGGCGCCCACCCCGGGGAGGGTTTCCACCTCAGCTGGGCGTCCTGAAGCCACTGGGCGCCCACCCCGGGGAGGGTTTCCACCTCAGCTGGGCATCCTGAAGCCACTGGGCGCCCACCCTGGGGAGGGTTTCCACCTCAGCTGG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_2181:HG4_PB_SVrefine2PBcRDovetail_6519:HG4_PB_SVrefine2Falcon1Dovetail_7900:HG3_PB_SVrefine2PBcRDovetail_6085:HG3_PB_SVrefine2Falcon1Dovetail_7853;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_2181:HG4_PB_SVrefine2PBcRDovetail_6519:HG4_PB_SVrefine2Falcon1Dovetail_7900:HG3_PB_SVrefine2PBcRDovetail_6085:HG3_PB_SVrefine2Falcon1Dovetail_7853;NumExactMatchSVs=5;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-318;DistBack=62609;DistForward=-314;DistMin=-314;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1120;REFWIDENED=12:2214721-2216158;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=713.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:24:0|1:31:2:7:22:./.:19:1:7:1:0/0:33:0:./.:18:1:.:.:.
chr12	6290420	HG2_Ill_250bpfermikitraw_17200	GTGTCTGTGTGTATCTATGTGTGTATGTGTGTGTCTGTATGTGTATGTGTCTGTATGATGTC	G	20	PASS	ClusterIDs=HG4_PB_pbsv_12915:HG4_Ill_GATKHC_20659:HG4_Ill_GATKHCSBGrefine_8880:HG2_Ill_GATKHC_20663:HG2_Ill_GATKHCSBGrefine_8616:HG4_Ill_scalpel_11883:HG4_Ill_250bpfermikitraw_17049:HG4_Ill_150bpfermikitraw_16397:HG2_Ill_scalpel_12167:HG2_Ill_250bpfermikitraw_17200;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_250bpfermikitraw_17200:HG2_Ill_scalpel_12167:HG4_Ill_150bpfermikitraw_16397:HG4_Ill_250bpfermikitraw_17049:HG4_Ill_scalpel_11883;NumExactMatchSVs=5;ClusterMaxShiftDist=0.184874;ClusterMaxSizeDiff=0.184874;ClusterMaxEditDist=0.184874;PBcalls=1;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=6;NumTechs=2;NumTechsExact=1;SVLEN=-61;DistBack=-70;DistForward=33028;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=3;REFWIDENED=12:6290419-6290485;PctSeqSimilarity=0.8741;PctSizeSimilarity=0.6854;PctRecOverlap=0;SizeDiff=-28;StartDistance=156;EndDistance=128;GTMatch=0;TruScore=51;MatchId=718.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:42:32:0|1:41:4:4:27:./.:30:14:81:8:./.:26:3:./.:.:.:.:.:.
chr12	13097681	HG2_Ill_svaba_16130	TCCTTCCTTCCTTTCTTCCTTCCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTC	T	10	PASS	ClusterIDs=HG2_Ill_svaba_16130:HG3_Ill_svaba_16271:HG2_Ill_svaba_16131:HG4_Ill_svaba_16187;NumClusterSVs=4;ExactMatchIDs=HG2_Ill_svaba_16130:HG4_Ill_svaba_16187;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0769231;ClusterMaxSizeDiff=0.0769231;ClusterMaxEditDist=0.0769231;PBcalls=0;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-53;DistBack=15374;DistForward=-7;DistMin=-7;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=12;REFWIDENED=12:13097680-13097747;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=731.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:10:25:./.:12:15:1:1:./.:0:6:0:4:0/1:4:27:./.:.:.:.:.:.
chr12	53892692	HG3_Ill_150bpfermikitraw_16643	CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_9236:HG3_Ill_SVrefine2DISCOVARDovetail_9535:HG3_Ill_Krunchall_17623:HG3_Ill_GATKHC_20988:HG3_Ill_GATKHCSBGrefine_8719:HG3_Ill_250bpfermikitraw_17139:HG3_Ill_150bpfermikitraw_16643;NumClusterSVs=7;ExactMatchIDs=HG3_Ill_150bpfermikitraw_16643:HG3_Ill_250bpfermikitraw_17139:HG3_Ill_GATKHCSBGrefine_8719:HG3_Ill_GATKHC_20988:HG3_Ill_Krunchall_17623:HG3_Ill_SVrefine2DISCOVARDovetail_9535;NumExactMatchSVs=6;ClusterMaxShiftDist=0.04;ClusterMaxSizeDiff=0.04;ClusterMaxEditDist=0.04;PBcalls=0;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=6;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=-31;DistForward=30408;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=46;REFWIDENED=12:53892695-53892788;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=778.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:0/0:./.:11:42:1/1:2:16:2:6:0/0:6:0:12:0:./.:17:1:./.:.:.:.:.:.
chr12	125894104	HG3_PB_SVrefine2PBcRDovetail_6441	CAGTGGAGTGGAGTGAGTGGAGTGGAGTGGAGTGGAGTGGAGGAGTGGAGTGGAGTGGAGTGGAGGAGTGGAGTGGAGTGGAGGAGTGGAGTGGAGTGGAGTGGAGTGAGTGGAGTGGAGTGGAGTGGAGTGGAGGAGTGGAGTGGAGTGGAGTGAGTGGAGTGGAGTGAGTGGAGTGG	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_6441:HG2_Ill_GATKHC_21818;NumClusterSVs=2;ExactMatchIDs=HG3_PB_SVrefine2PBcRDovetail_6441;NumExactMatchSVs=1;ClusterMaxShiftDist=0.110818;ClusterMaxSizeDiff=0.110818;ClusterMaxEditDist=0.110818;PBcalls=1;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-178;DistBack=76974;DistForward=-179;DistMin=-179;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=241;REFWIDENED=12:125894105-125894435;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=852.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:35:19:./.:12:5:11:6:0/0:89:1:52:1:0/0:11:0:./.:.:.:.:.:.
chr12	131612017	HG2_PB_SVrefine2Falcon1plusDovetail_2786	TGTTGGTTGTGATGGGACCCTGAGCTCAGATGGGGTGTTGGTTGGGTTGGTTGTGATGGGACCCTGAGCTCAGGTGAGGTGTTGGTTGGGTTGGTTGTGATGGGACCCTGAGCTCAGGTGGGGTGTTGGTTGGGTTGGTTGTGATGGGACCCTGAGCTCAGGTGGGGTGTTGGTTGG	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2786:HG2_PB_pbsv_13707:HG2_PB_PB10Xdip_6792:HG2_PB_HySA_24979:HG3_PB_pbsv_13401:HG2_PB_SVrefine2PBcRplusDovetail_2634;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2786:HG2_PB_SVrefine2PBcRplusDovetail_2634;NumExactMatchSVs=2;ClusterMaxShiftDist=0.156522;ClusterMaxSizeDiff=0.156522;ClusterMaxEditDist=0.313953;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-176;DistBack=-133;DistForward=193;DistMin=-133;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=28;REFWIDENED=12:131612018-131612221;PctSeqSimilarity=0.9603;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-352;EndDistance=-352;GTMatch=0;TruScore=65;MatchId=879.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:29:0|1:14:2:4:24:0/0:56:1:52:0:0/0:41:0:./.:.:.:.:.:.
chr12	131763115	HG2_PB_SVrefine2PB10Xhap12_9894	CCACCCAGCCCAAGAGAGCACCCAGCAAGGTCACTCGGTGTACTGTCACCCAGCCCAAGAGAGCACCCAGCAAGGTCACTCGGTGTACTGTCACCCAGCATGTGAGAGCACCCAGCAAGGTCACTCGGTGTACTGT	C	10	PASS	ClusterIDs=HG4_PB_pbsv_13705:HG3_PB_SVrefine2PBcRDovetail_6493:HG2_PB_SVrefine2PBcRplusDovetail_2636:HG2_PB_SVrefine2PB10Xhap12_9894:HG2_PB_assemblyticsPBcR_6237:HG3_PB_assemblyticsfalcon_6442:HG3_PB_SVrefine2Falcon1Dovetail_8304:HG2_PB_pbsv_13710:HG3_PB_pbsv_13404;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_9894:HG2_PB_SVrefine2PBcRplusDovetail_2636:HG3_PB_SVrefine2PBcRDovetail_6493;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0147059;ClusterMaxSizeDiff=0.0147059;ClusterMaxEditDist=0.103321;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-135;DistBack=302;DistForward=-89;DistMin=-89;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=451;REFWIDENED=12:131762687-131763272;PctSeqSimilarity=0.9849;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=429;EndDistance=429;GTMatch=0;TruScore=66;MatchId=881.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:37:0|1:23:1:5:34:./.:11:0:0:2:0/1:17:5:./.:.:.:.:.:.
chr12	133450092	HG2_PB_SVrefine2Falcon2Bionano_6870	TGCTGGACTGACTTTCTGTGTCCTCCTGCTCCACAGGGCTGGCTACGGGGCTGGAGTGCACACGGACTTGGGTGCATGCAGGGGCGCTGGA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3146:HG4_PB_SVrefine2Falcon1Dovetail_8412:HG4_Ill_250bpfermikitraw_18208:HG2_Ill_250bpfermikitraw_18444:HG4_PB_SVrefine2PBcRDovetail_6885:HG2_10X_SVrefine210Xhap12_9630:HG2_PB_pbsv_13820:HG4_PB_pbsv_13801:HG3_PB_SVrefine2Falcon1Dovetail_8361:HG2_PB_SVrefine2PB10Xhap12_9960:HG2_PB_SVrefine2Falcon2Bionano_6870:HG2_PB_SVrefine2Falcon1plusDovetail_2835;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3146:HG3_PB_SVrefine2Falcon1Dovetail_8361:HG2_PB_SVrefine2PB10Xhap12_9960:HG2_PB_SVrefine2Falcon2Bionano_6870:HG2_PB_SVrefine2Falcon1plusDovetail_2835;NumExactMatchSVs=5;ClusterMaxShiftDist=0.120879;ClusterMaxSizeDiff=0.120879;ClusterMaxEditDist=0.153846;PBcalls=8;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=4;NumTechs=3;NumTechsExact=2;SVLEN=-90;DistBack=4259;DistForward=-91;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=181;REFWIDENED=12:133450093-133450363;PctSeqSimilarity=0.99;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-149;EndDistance=-149;GTMatch=0;TruScore=66;MatchId=892.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:28:./.:13:10:7:14:./.:7:1:1:2:0/1:9:8:./.:.:.:.:.:.
chr13	30131788	HG2_PB_SVrefine2Falcon1plusDovetail_2902	GTGAGGGGGGAGTGAATGTGAATGAGGGAGAGTGAATATGAGTGGGGGGGAGTGAATGTGAATGAGGAGGAGAGTGAATGTGAGTGAGGAGGAGTGAATGTGAGGGAGGAGTGAATATGAGTGAGGGAGGAGTGAATGTGAATGAGGGGGAAAGTGAATGTGAGGGGGAGTGAATGTGAGTGAGGGGGAGTGAATGTGTATGGGGGGGAGTGAATGTGAGTGGGGGGAGTGAATGTGAGTAGGGGGGAGTGAATGTGAGTGAAGGGGGAGTGAATGTGAGTGGGGGGAGTGAATGTGAGTAGGGGGGAGTGAATGTGAGTGGGGGGAGTGAATGTGAATGAGGGGGAGTGAATGCGAA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_6932:HG4_PB_SVrefine2Falcon1Dovetail_8480:HG3_PB_SVrefine2Falcon1Dovetail_8436:HG2_PB_SVrefine2PBcRplusDovetail_2758:HG2_PB_SVrefine2PB10Xhap12_10055:HG2_PB_SVrefine2Falcon1plusDovetail_2902;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_2902:HG2_PB_SVrefine2PB10Xhap12_10055:HG2_PB_SVrefine2PBcRplusDovetail_2758;NumExactMatchSVs=3;ClusterMaxShiftDist=0.251572;ClusterMaxSizeDiff=0.251572;ClusterMaxEditDist=0.251572;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-357;DistBack=44811;DistForward=-78;DistMin=-78;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=482;REFWIDENED=13:30131789-30132627;PctSeqSimilarity=0.9391;PctSizeSimilarity=0.8459;PctRecOverlap=0;SizeDiff=55;StartDistance=-1406;EndDistance=-1351;GTMatch=0;TruScore=59;MatchId=909.0.2	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:43:./.:7:19:2:8:0/0:50:0:134:1:0/0:23:0:0/0:53:2:.:.:.
chr13	48315756	HG2_PB_assemblyticsfalcon_6887	TAAAACCACAAAGAGATACCATCTCACACCAGTTAGAATGGTGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGTGATTCCTCAAGGATCCAGAACTAGAAATGCCATTTGATCCAGTGATCCCATTACTGGTTATATACCCAAAGGATTATAAATCATGCTACTATAAAGACACATGTACGTATATGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCATCAGTGATAGACTGGATTAAGAAAATGTGGCACGTATACACCATGGAATATTATGCAGCCATAAAAAAGGATGAGTTAATGTCCTTTGTAGGGACATGGATGAAGTTGGAAACCATCATTCTGAGCAAACTATCACAAGGACAGAAACCCAAACACTGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACTTGGACACAGGGCGGGGAACATCACACACTGGGGTCTGTTCTGGGGTGGGGGAAGGGGGAGGGATAGCATTAAGAGAAATACCTAATGTAAATGATGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTATCCTAGAACTTAAAGTATAATGATAATAATTA	T	20	PASS	ClusterIDs=HG2_PB_pbsv_14050:HG2_PB_assemblyticsfalcon_6887:HG2_PB_SVrefine2Falcon1plusDovetail_2972:HG3_PB_pbsv_13738:HG4_Ill_GATKHCSBGrefine_9656;NumClusterSVs=5;ExactMatchIDs=HG2_PB_assemblyticsfalcon_6887;NumExactMatchSVs=1;ClusterMaxShiftDist=0.00413793;ClusterMaxSizeDiff=0.00275482;ClusterMaxEditDist=0.0703448;PBcalls=4;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-724;DistBack=344;DistForward=25377;DistMin=344;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1456;REFWIDENED=13:48314305-48316484;PctSeqSimilarity=0.9776;PctSizeSimilarity=0.9972;PctRecOverlap=0;SizeDiff=-2;StartDistance=1071;EndDistance=1069;GTMatch=0;TruScore=65;MatchId=941.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:19:./.:26:1:7:18:0/0:64:0:33:0:0/0:116:0:./.:87:7:.:.:.
chr13	111109157	HG2_PB_SVrefine2PBcRplusDovetail_3048	GATGCCCTGCGTCTGCGTGGAACCCCAGGCGTCCGTGGGGCTGATGCCCTGCGTCTGCGTGGGACCCCAGGCGTCCGTGGGGCTGATGCCGTGCGTCTGCGTGGGACCCCAGGCGTCCGTGGGGCTG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_7212:HG4_PB_assemblyticsfalcon_7372:HG4_PB_SVrefine2Falcon1Dovetail_8795:HG2_PB_pbsv_14449:HG4_PB_pbsv_14417:HG4_PB_assemblyticsfalcon_7371:HG4_PB_SVrefine2Falcon1Dovetail_8794:HG2_Ill_breakscan11_2049:HG4_PB_SVrefine2PBcRDovetail_7198:HG4_Ill_SVrefine2DISCOVARDovetail_10230:HG2_PB_SVrefine2PBcRplusDovetail_3048:HG2_PB_SVrefine2PB10Xhap12_10438;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7212:HG2_PB_SVrefine2PBcRplusDovetail_3048:HG2_PB_SVrefine2PB10Xhap12_10438;NumExactMatchSVs=3;ClusterMaxShiftDist=0.289562;ClusterMaxSizeDiff=0.289562;ClusterMaxEditDist=0.344595;PBcalls=10;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-126;DistBack=0;DistForward=-127;DistMin=-127;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=391;REFWIDENED=13:111109158-111109674;PctSeqSimilarity=0.9792;PctSizeSimilarity=0.9921;PctRecOverlap=0;SizeDiff=1;StartDistance=-216;EndDistance=-215;GTMatch=0;TruScore=65;MatchId=1041.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:29:38:0|1:29:0:2:36:./.:2:2:2:0:./.:20:1:./.:.:.:.:.:.
chr13	113739909	HG2_PB_SVrefine2PBcRplusDovetail_3095	TAGGGTGGCGAGAGGAAACTCCCCAGGGAGCAGGTGCGAGGGGTTTGCACCTGGCATC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3613:HG3_PB_pbsv_14194:HG4_PB_pbsv_14508:HG3_PB_assemblyticsfalcon_7588:HG2_PB_pbsv_14534:HG4_Ill_250bpfermikitraw_19100:HG4_Ill_150bpfermikitraw_18392:HG3_Ill_250bpfermikitraw_18795:HG3_Ill_150bpfermikitraw_18271:HG2_Ill_Krunchall_19701:HG2_Ill_250bpfermikitraw_19366:HG4_PB_SVrefine2PBcRDovetail_7239:HG4_Ill_SVrefine2DISCOVARDovetail_10264:HG3_PB_SVrefine2PBcRDovetail_6863:HG3_Ill_SVrefine2DISCOVARDovetail_10383:HG2_PB_SVrefine2PBcRplusDovetail_3095:HG2_PB_SVrefine2PB10Xhap12_10493:HG2_PB_SVrefine2Falcon2Bionano_7258:HG2_PB_SVrefine2Falcon1plusDovetail_3287;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3613:HG4_PB_SVrefine2PBcRDovetail_7239:HG4_Ill_SVrefine2DISCOVARDovetail_10264:HG3_PB_SVrefine2PBcRDovetail_6863:HG3_Ill_SVrefine2DISCOVARDovetail_10383:HG2_PB_SVrefine2PBcRplusDovetail_3095:HG2_PB_SVrefine2PB10Xhap12_10493:HG2_PB_SVrefine2Falcon2Bionano_7258:HG2_PB_SVrefine2Falcon1plusDovetail_3287;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0521739;ClusterMaxSizeDiff=0.0521739;ClusterMaxEditDist=0.140351;PBcalls=10;Illcalls=9;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=6;HG4count=5;NumTechs=2;NumTechsExact=2;SVLEN=-57;DistBack=-3613;DistForward=-34;DistMin=-3613;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=283;REFWIDENED=13:113739910-113740249;PctSeqSimilarity=0.9827;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-172;EndDistance=-172;GTMatch=0;TruScore=66;MatchId=1052.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:68:1/1:4:47:0:16:./.:3:0:2:0:0/0:48:0:./.:.:.:.:.:.
chr13	114195537	HG2_PB_SVrefine2PBcRplusDovetail_3114	CACGCACACGATTGCTGATCACTGCCATGCTTTATTACCGCCGAGATGTGTGGATGATACGCACACGATTGCTGATCACTGCCATGCTTTATTACCGCTGAGTTGTGTGGATGCCATGCACACGATTGCTGATCACTGCCATGCTTTATTACTGCCCAGATGTGTGGATGATACGCACACGATCGCTGATCACTGCCATGCTTTAATACCGCCGAGATATGTGGATGATACGCACACGATCGCTGATCACTGCCATGCTTTATTACCGCCGAGATGTGTGGATGAT	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_10522:HG2_PB_pbsv_14576:HG4_PB_pbsv_14542:HG4_PB_SVrefine2PBcRDovetail_7256:HG2_PB_SVrefine2PBcRplusDovetail_3114;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_3114:HG4_PB_SVrefine2PBcRDovetail_7256;NumExactMatchSVs=2;ClusterMaxShiftDist=0.181529;ClusterMaxSizeDiff=0.18124;ClusterMaxEditDist=0.216561;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-285;DistBack=2981;DistForward=58;DistMin=58;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=906;REFWIDENED=13:114195538-114196728;PctSeqSimilarity=0.9013;PctSizeSimilarity=0.8382;PctRecOverlap=0;SizeDiff=-55;StartDistance=-326;EndDistance=-381;GTMatch=0;TruScore=57;MatchId=1057.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:22:15:0|1:21:1:2:13:./.:18:1:22:1:0/0:31:0:./.:.:.:.:.:.
chr13	114237984	HG4_PB_SVrefine2PBcRDovetail_7261	GTGCACACACACTAGTGCACACACCAGTCCCCGCTCCCTCACATGCACACACACTAGTGCACACACCAGTCCCCGCTCCCTCACA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3318:HG4_PB_pbsv_14548:HG3_PB_pbsv_14237:HG2_PB_pbsv_14581:HG4_PB_SVrefine2PBcRDovetail_7261:HG3_PB_SVrefine2PBcRDovetail_6883:HG2_PB_SVrefine2PBcRplusDovetail_3119:HG2_PB_SVrefine2PB10Xhap12_10529:HG2_PB_SVrefine2Falcon2Bionano_7283;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_3318:HG4_PB_SVrefine2PBcRDovetail_7261:HG3_PB_SVrefine2PBcRDovetail_6883:HG2_PB_SVrefine2PBcRplusDovetail_3119:HG2_PB_SVrefine2PB10Xhap12_10529:HG2_PB_SVrefine2Falcon2Bionano_7283;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0606061;ClusterMaxSizeDiff=0.0606061;ClusterMaxEditDist=0.0848485;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-84;DistBack=18008;DistForward=-85;DistMin=-85;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=255;REFWIDENED=13:114237985-114238323;PctSeqSimilarity=0.9794;PctSizeSimilarity=0.9762;PctRecOverlap=0;SizeDiff=2;StartDistance=-218;EndDistance=-216;GTMatch=0;TruScore=65;MatchId=1060.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:11:48:1/1:1:16:3:16:./.:4:1:6:0:./.:5:0:./.:.:.:.:.:.
chr13	114841327	HG3_PB_SVrefine2Falcon1Dovetail_8865	CGTGTGGAGGCGCCGGCAGGACGAAGCCTCCCGTGTCCGCGCCGCGTATCTCTGCGTGTGGAGGCGCCGGCAGGACGAAGCCTCCCGTGTCGGCGCCGCGTATCTCTGG	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_3146:HG4_PB_SVrefine2Falcon1Dovetail_8899:HG3_PB_SVrefine2PBcRDovetail_6900:HG3_PB_SVrefine2Falcon1Dovetail_8865:HG3_Ill_SVrefine2DISCOVARDovetail_10410:HG2_PB_SVrefine2PB10Xhap12_10572:HG2_PB_SVrefine2Falcon2Bionano_7305:HG3_Ill_250bpfermikitraw_18839:HG2_Ill_250bpfermikitraw_19407:HG2_PB_pbsv_14636:HG3_PB_pbsv_14292;NumClusterSVs=11;ExactMatchIDs=HG3_Ill_SVrefine2DISCOVARDovetail_10410:HG3_PB_SVrefine2Falcon1Dovetail_8865:HG3_PB_SVrefine2PBcRDovetail_6900:HG4_PB_SVrefine2Falcon1Dovetail_8899;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0185185;ClusterMaxSizeDiff=0.00921659;ClusterMaxEditDist=0.165899;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-108;DistBack=175;DistForward=-50;DistMin=-50;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=488;REFWIDENED=13:114840913-114841508;PctSeqSimilarity=0.9815;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=242;EndDistance=242;GTMatch=0;TruScore=66;MatchId=1070.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:28:0|1:23:7:3:25:./.:0:0:1:1:0/1:7:3:./.:.:.:.:.:.
chr13	114852676	HG3_Ill_scalpel_13973	CTCCCTTCGTCCTCGCGGGGAAATCACGGGGAAGTGCTGAGTCTGGAGTATTTAT	C	20	PASS	ClusterIDs=HG3_PB_HySA_22008:HG4_Ill_scalpel_13399:HG4_Ill_GATKHC_23184:HG3_Ill_scalpel_13973:HG2_Ill_scalpel_13723:HG3_PB_HySA_22009;NumClusterSVs=6;ExactMatchIDs=HG2_Ill_scalpel_13723:HG3_Ill_scalpel_13973:HG4_Ill_GATKHC_23184:HG4_Ill_scalpel_13399;NumExactMatchSVs=4;ClusterMaxShiftDist=0.018018;ClusterMaxSizeDiff=0.018018;ClusterMaxEditDist=0.198198;PBcalls=2;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=4;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=-61;DistForward=11675;DistMin=-61;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=26;REFWIDENED=13:114852675-114852757;PctSeqSimilarity=0.0968;PctSizeSimilarity=0.05;PctRecOverlap=0.0509;SizeDiff=-1026;StartDistance=1026;EndDistance=0;GTMatch=0;TruScore=6;MatchId=1071.1.1	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:21:10:0|1:20:0:2:7:./.:4:0:0:4:0/1:10:7:./.:.:.:.:.:.
chr14	21895403	HG4_Ill_SVrefine2DISCOVARDovetail_10304	TGTCCCATCACAATAGCAAGGAGTACTCAATCTTGAGCTTGCTCTTGCCCGTCCCATCCCAATAGCAAGGAGCACTCACTTGAGCTTGCTCTTGCCC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3652:HG2_10X_SVrefine210Xhap12_10145:HG4_PB_HySA_21328:HG2_PB_pbsv_14689:HG3_PB_pbsv_14340:HG4_PB_pbsv_14628:HG3_PB_HySA_22066:HG2_PB_HySA_26694:HG4_Ill_GATKHCSBGrefine_10047:HG4_Ill_250bpfermikitraw_19162:HG4_Ill_150bpfermikitraw_18447:HG3_Ill_GATKHCSBGrefine_9630:HG3_Ill_250bpfermikitraw_18873:HG3_Ill_150bpfermikitraw_18341:HG2_Ill_SpiralSDKrefine_4783:HG2_Ill_GATKHCSBGrefine_9746:HG2_Ill_250bpfermikitraw_19444:HG2_Ill_150bpfermikitraw_18317:HG4_PB_SVrefine2PBcRDovetail_7289:HG4_PB_SVrefine2Falcon1Dovetail_8926:HG4_Ill_SVrefine2DISCOVARDovetail_10304:HG3_PB_SVrefine2PBcRDovetail_6930:HG3_PB_SVrefine2Falcon1Dovetail_8896:HG3_Ill_SVrefine2DISCOVARDovetail_10426:HG2_PB_SVrefine2PBcRplusDovetail_3174:HG2_PB_SVrefine2PB10Xhap12_10609:HG2_PB_SVrefine2Falcon2Bionano_7325:HG2_PB_SVrefine2Falcon1plusDovetail_3384;NumClusterSVs=28;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_3652:HG4_PB_SVrefine2PBcRDovetail_7289:HG4_PB_SVrefine2Falcon1Dovetail_8926:HG4_Ill_SVrefine2DISCOVARDovetail_10304:HG3_PB_SVrefine2PBcRDovetail_6930:HG3_PB_SVrefine2Falcon1Dovetail_8896:HG3_Ill_SVrefine2DISCOVARDovetail_10426:HG2_PB_SVrefine2PBcRplusDovetail_3174:HG2_PB_SVrefine2PB10Xhap12_10609:HG2_PB_SVrefine2Falcon2Bionano_7325:HG2_PB_SVrefine2Falcon1plusDovetail_3384;NumExactMatchSVs=11;ClusterMaxShiftDist=0.0638298;ClusterMaxSizeDiff=0.0638298;ClusterMaxEditDist=0.191489;PBcalls=14;Illcalls=13;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=12;HG3count=8;HG4count=8;NumTechs=3;NumTechsExact=2;SVLEN=-96;DistBack=64008;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=571;REFWIDENED=14:21895404-21896070;PctSeqSimilarity=0.9491;PctSizeSimilarity=0.9792;PctRecOverlap=0;SizeDiff=2;StartDistance=-108;EndDistance=-106;GTMatch=0;TruScore=64;MatchId=1077.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:47:1/1:1:12:1:11:0/0:31:1:23:1:0/0:37:1:./.:.:.:.:.:.
chr14	35605587	HG2_PB_pbsv_14767	GTTTTTTTTTTGAAACAGAGTTTCGCTGTTGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGCTTACCGCAACCTCCGCCTCTCGGGTTTAAGCAATTCTCCTGTCTCAGCCGCCTGAGTAGCTGGGATTACAGGCATGCACCACCACACCCGGCTAATTTTGTATTTTTAGTAGAGACGGGGGTTTCTCCATATTGGTGAGGCTGGTCTCGAACTCCCAGCCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCTGGCCCATATTGGGTTTTAATGTCAGCAGAAGATCCAGGACTTGGGTTCCAGCTTACAGGGGAGAGTTAATGCTGGAGGTTTGGGGACCATCACATAATAGTAATAGGTTAAATGCGAAGAGTGCCTGAGCTCATCCAGGAAAACAGTGAGAACAGTAGTGGGCTCAATTCACAACTTGGTGGGGGTGGGATGGGGAACACCAGCATAGGAAGGAAGGTCAGAGAAGAAGTTTCATATATTAGATAGAACAGTCAGAACAAGGCAGAAAGAATCTATTCAGTACAGTGTCACAAATATCAAAACAGAGTGCAATACACTAGAGATTTGTTAAGGTGTGGACTGAAGGGATACATTGGATTTGGCAACTAAGAAATCATTGATGACCTTGGGAAGAACAGTTTCAGTAGTTTAATGGGGGCCAAATTCAGCCAGGTTATAGCAGCTGAGTGAATACCCATTGAGTGTAAACTCTAATTTTAAGAAGTTTACATGAAAATTAGAAAGATGATATAGTGGTGGCTAGAGGATGGTGGAGTCAAGGGAGGGTTTAGAGAGATAGGCTTGTGCCTGTTTGGAGGATGAAGAAAAGGTATCAATAGAGATAAAAAATATTGAGTATACAGGATATGTAGGAGAGAAAAAGGAATATTGCTGAGTAAAAGTAGCAGGGGTTGCCAAAAAGAGCACAAATGTGGAGGTTGGAAATGAAGGAAATATCATTTGAGGCTGTAGAAAAGAAAGTGAAGATGGGTGTGGATGATAAATTGGTAGAAAGAGGGAACATTGAGAGAAATGATACCTGCTGTGTTAAGTGGTATACAAGATGAGAGAGATGAGAGTCAAGTAGAGTACTAGAGAGAGTGGGGAAGGTTTGGAATGGTTCTTGAGGGGATGTCAAGATGCTAACTCAAGGCAGAAGGATTATGGCAGAGGGTGGGTGCTGAGGTTTGAATCTGTGAATCTGTAGACATTACTCTGTGTGATTGTGTGATTTAATATATTTCCAACAGAGCTTGGCTCACCAAGAGCAGAGGTAGTAAAGACAAAGGGTAGCGTTGGTCCAGAGTTTGGGTTTTGTTGGTTAGATGTGGCACATGATAGAGAGCAAGAGAAGGCGATTCTGACAAAGTAGTTAACATGGTCTGCATGGGGTCCAGGCCAGATAGGAAAGGGAGGAAGGCCAAAGAGCACTATATGAGAGGATTCCAGGGACTGGTTGTCTCTTCGTGCATGTACATGTGTGTGTTGGTTTTGTTTTGGTTGGTTGGTTGTTTTTTTTCCTCACCATTTGTATTAATTTGCTAAAGCTGCTATTGCAAATACCACAAACCAGGTGGCTTTAACAGCAGAAATTCATTTTCTCACCATTCTGGATTCTAGAAGTCCAAGATCAAGGTGTTGTCAGCTTTGGTTTCTCTTGATCCCTCTCTCTTTGGCTTGCCGATGGCTACCTTCTTGTGGTATCTTCACATGGCCTTCCTCTGGTGTATTCCTGGTATCATCTTTGTATGTACAAATTTCCTCTTATAAGGACACCCATCAGATTTGATTAGGGCCCATCCTTATGACCTTATTTTACCTTAATTACCTCTTTAAAGGCCTATCTCCAAATACAGTCACATTCTGAAATACTATGGGCTGAGACTTCAACATATGAATTTGGTGAGTGGACACAAGTCAGTCCGTAATACCGTTCATTGTAAATATGCGTTAATAAAACTATATTATATTCAGCATTTTAAATTATTTTGTGTTAGGAACATTAGAAACATCTAGTTGACAAATAGCTGGATCTGCCTTCAATGTTGCTTTCTAAAGCTTGCTTATAATTTGAGAATATGAGGTATAAACCAAGGAATAATTATTAAAGGAATAAATTATTAAATAATTATTAAATTATTAAATCTACTTAAAAAAATTTTGCCAACTGACCTCCATAAACACCTAAAATGAGCATTATAAAAGTTATTTTAGGCTTATATGTTTTCCCCAAATAGTACTGTTGTTCAAAACAAAGTAAATTAGATGACACCCTCTAATGTAGCGGCTTTCAACTGTGGCTGCTGGTTAGAATACTTGGGAAGTGTTTAAAACTGCTACCTGGACCTCAGCCACTAAAGATATTGATTTTTTTTTTTTAGACGGAGTCTCCCTCTGTCGCTCAGGCTGGAGTACAGTGGTGCCATCTGGGCTCACTGCACCCTCTGTCTCCTGGGTTCACATGAGTCTCCTGCCTCAGCCTCCCGAGTGGCTGGGACTACAGGTGCATACCACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACGGGGTTTTACCATGTTGGCTAGGCTGGTGTCGAACTCCTGACCAAAAGTGATCCACCCACCTCAGCCTCCCGAAGTGCTGGGATTACAGGCATGAGCCGCCATGCCCGGCCAAAGATACTGATTTTTCATACAAGTCCTTTTGGTTTTGTTGTTAAAATTAGAGATAGGGTCTCACTGTGTTGCTCAGGCTGGTCTTGAGCTCCTGGGCTCAAGTGATTCTCCTGCCTTGGCCTCCTAAGGTTCTGGGATTACAGGTGTGAGCCACCGTGCCCAGGAATATTTTGATTTTTCAACTATAGTTTTATTGCAGTATATTTGACATACAGTAAACAGCAGATATTTAAAGTGTACAACTTTATGAGTTTTGTCATATGTATATACCTGTGGAACTGTCACTGCAATCAAGATAATGAACATATGGATCACCCCCAAAAGTTTCCTCATGCCATTTTGTAATGACTCCCTTGCCCTGCCATCCCCAGGCAACCACTATGGAATCATACAATATATACTTTTTTTTTTGGTCTGATTTGTTTTATTCAGCATAATCATTTTGAGATTTCATCCTTGTTTTGTGTCTCAATCATTCTTTCATTTTTATAATTGAGTAGTATTCCATTGTGTGACTATTTTACAATTTGTACATTTGTTGATGGACATTTAGGTTATTTCCAGTTTGGTGCTGTTATAAATAAAGCTGATTAGAACAGTCTTGAACAAGTCTTTGTGCTTTTGTTATTGTTTCCTAGGGCTGCCCTAACAAATTACCACAAACTGGGTAGCTTCAAATGACAGATATTTACTCTCTCACAATTCTGGAGGCTAGAAATCTGAAATCAAGATGTTGGCAAGGTCATGCTCCTTTTGAAGGATCCAGGGAAGAATCCTTCCTTCTCTTTCCTACCTTCAGAAGCCAGATCCTGGCAATTGATGGTGTTCCTTGGCTTTTAGCTGCATCACTCCATTCTCTGCGTCTGTCTTCATGTGGCCTTTGTGTGTGTGTATCTCTGTGTGCCATCTCTTCCTCTTATAAGGCTACAAGTTATGGGATTTAGAGCCCACCCTAATCTAGCATGACCTTGTCTTATTTCATTTACAAAGACCCTCTTTCTACATTCACATTCTGTGTTTCCTGCTAGACATAAATTTTGAGGTTACACTATTCAACCTACTACAGCTTTTTTTTTCTCTTGGGTAACTCTCTTAGGACTGGAATGGTTTGGTCTTATGGTAGATGTCTTATGGTAGATATGTGTGTGTGTGTGTCGCTTTTTCAGAAACTGCCCAACTGTTTTCCAGAGTGGTTGTACCATTTTACATTTCCACCAGCAGAGTATGAGGGCTATAGTAGCCCCACATCCTGGCTGATGCTTAGTATGGTTAAGGTTAGTCTCTTTACTGTTCTAATAGGTATGAAGTGGTATCTCATTGTGATTTTAATTTAGATTTTCCTAATGACTAATGTTGTTGAGCATCTTTTTATATGCTTAATTGCCATCCATATATCTTTGGTATAATATTTATTTGTTCAGATTTTTTGCCTATTTTAAAAATTGGATTGTTTCATTATTGAGTTGTAAGAACTGTTTCTATATTCTAGATACAAGTCCTAAGTCCAATATATTTTACAAATATTTTCTGTCAGTCTGTGGTTGACTTTCATTTCATAACATGGAGATTCTGATTTAATTGCTTTGGCTTGGTGGGGTCCAGGTATTAGGATTTTCAAAAGCTTCCAGGTGATTTTAAAGTGCAGCTAGAATCAAGGACAATTGCTTCTAATGTGAGATTTTGAGGAAACTTAAAGTATGGCAGCTTCTTTTCTGTTGAATAGTTTTGGGAGAAAAATCTCAGTTATTATATAAGGTAATTTTTTAGCTTTTCTGTTTTAAACATTTGTTTACTGTAATTAGACAACATAGCCAGCAGATGGCAATAATGTAACATATAAAAATTATTCTAGGTATGACCAAGTCCATCAGGTTAAAGGATTTGTTGAACTTTTTAAAATATTAAACTGAAAGATATCTGTCATTTCTGTGTAAGTCAGATTAGTGATAGTAGGTAGAGAAAAGAGTGGTATATGTGAATTTTAAGTGAACAAAGCAGAATTCCAAATAATTTGCATCTACTGATTTAACTACTGACACTAATTGAGTGGGCATCAGTGAAGGTCAAAAAGTGAATTTGGAGCTATGCGCATAGTGTTACTTTAATGTTAATTAGGTTTTTTTCTTATTTTCCTTCCTTCTTTTTCTTTTTTTTTTTGTTTTTGTTTGTTTGTTTTGTTTTGTTTTTTGAGACAAGTTCTTACTATTCACCCAGGCTGGAATACAGTGGCATGATCATAACTCACTGCAGCCTTGAACTCCTGGGCTGAAGTAATCCTCCTGCCTCATCCTCCTGGGTAGCTAGGATTCAGGTGTGTACCATCACATCTGGCTAATTTTTTTATTTTAATTTTTTCTGTAGAGACGGGGTCTCACTATGTTGCCTAGGCTGGTCTTGAACTCCTGGCTTCTAGTGGTCCTCCCACCTTGGCCTCCCAAAGTGCTGAGATTTCAGGTGTGAGCTACTATGCCTAGACATGGTTCTTGATAATAACATTAAATTACAGTCAGATTTTTTATATTCAACTACAAAGATAATAATTCTTTAATATTTTCATTAGAGAAAATTTCAAACATAATCAAAAAGAGACTAACATAATGGACCCCCATCCTCCATGATTATTAACTCATGACCACTTTTTTTTTGACAGGGTCTTGCTCTGTCACCTAAGCTGGAGTGCAGTGGCACAATCACGGCTCACTGCAGCTGAGACCTCCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCATGAGTAGCTGGGACTACAGGCATGTGGCACAACACCTGGGCAATTTTTTTTTTTTAAGACGGAGTGTTGCTGTTGTTGCCCAGGCTGGAGTGCAATGGCACGATTTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAACGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCAACCACGCCCAGCTAATTTTTGTATTTTTAGTGGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGCTGATCCATCCGCCTCGGCCTCCTAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCCTTAATTTATTATCTTATGTAGAGATGGAGTCTCATTATGTTGCCAAGGCTGGTGTTGAACTCCTGGGCTCAAGCATTCCTCCCACCTCAGCCTCCCAAAGTGCTGGGATAATAAGTGTGAGCCACCACACCTGGAAGCTCATCCTGTAAATTATAAATTCATTGCTTTTTTTTTTTTTTTTTTCCAAGAGATGACGCCTTGCTCTTTTGCCCAAGCTGGGGTGCAATGGTGTGATCATAGCTCACTGCAGCAATGAACTCCTGGGCTGGAGCAATCCTCCCACCTCAACTTCCCAAGTAGCTAGGACTTACAGGTGCATGCCACCCTGCCCTGCTAATTTTTAAATTAAAAAAAAAAAAATTTTAGATAGGGTAGAGATGGCATTGGGCTTGGTGGCTCACACCTGTAATCCTAGCACTTTGGGAGGCCGAGGTGGGTGGATTGCCTGAGCTCAGAAGTTTGAGACTAGCCTGGACAACATGGCAAAACCCGTTCTCTAATAAAAATACAAAAAATTAGCTGGGCATAGTGGCTCATGCCTGTAGTCCTAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGCTGAGGTTGCAGTGAGCTGAGATCGCGCCACTGCATTCCAGCAGCCTAGGTGACAGAGTGAGACTCTTGTCTCAAAAAAAAAAAAATTGTAAAGATGGGATCTCACTATGTGGTCCAGGCTGGTCTTGATGCCCTGAGCTCAAGTGATCCTCTTGCCTTGGCTTCCCGAAGTGCTGGGATTACAGGCATAAGCCACCATGCTTGGCCTAAATTCTCTCTTAAACAGCTTTCTTTGTTTTCTTGTTGTAAAAAGTACTTCTTTGTAAAGCTATATTTTTCGTGTACTTTAAGAAATACTTTAGAATTGCAGTTCTTAACCTTTTGGTCTCGGGACCCTTTTACATATTTAAACATTATTGAACATTCTAGAGAGCTTTTGTTTTTTGTTTTGTTTTAAGCGAGACAGTCTCTCTCTGTTGCTCAGGCTGGAGTGCAGTGGCGCAATCGCTGCTCACTGCAACCTCTGCCTCCCAGGTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCCCGAGTAGCTGGGATTACAGGCATATGCCACCACACCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGAACTCCTGACCTCAAGTGATCCAGCCGCCTCGGCTTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGTGCCCAGCCAGATATATATTAATTTATTGAAAATAATATAAAAACTATTATAAAACATAACATTTTTATAGAAAATAATTCTGTTGTCCAGAATAAAACCAATATTAGTGAGAAGAGTACATTGTATTACATTTTTGCAGGTCTTTTAAATAATATGGCTTAATAAAAGACAGATAGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGAGTTTTGCTCTTGTTGCCTAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCGCAACCTCCGCCTCCGAGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCCAAGTAGCTGGGATTACAGGCATGCGCCACCAAGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCGACCTCAGGTGATCCGCCCACCGCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCGCGCCCGGCCAAAGACAGGTAGTTTTTTAAATAAGTGGCAAAAAAAAAACCCTTATATTTAGAATTAGCTATTCGGACTCAGTTTAGGTTATCCCAGTTTTACTGGCAACATCCAAAACATCATAGTTAGGAGCCAGTCAAACATAGGCTGCCTTCTCTCCATCAGTCCTGATTAGGGTGTTGATCGTGGTCATGTCAGTGTCACAGACCTTCATATAGCCTGTTTGATCTGGTGCTTGTTGGCTTTGATAACCACAGTGAACACAGATGTGGTATTGTCTTCTTCATGGTCAGCTCAGTGGTCAAGGGGAACTTGATGGCATAATAGTCCAGCTTGTATATCCTGCAGGTTCTCTACTGAGGATGTTTGGGCTACCTTCAAAGCCAAAGTGTGTTGGGCTACTGGAACATAGGTGACCTGCAGATATTTTTTTGTGTGTGTGACTGGATGCCTTTCAACACTGCCTTGCTGGCCTTAAAAGCCTTAGCTTTGGATTTGGCTTTGGGAGGAGCAGGGATTTCCTTCTTTGCTTTCAGCATCATCATTTTGGTGAAAAGGGTTGACACCTGGATTTTTATATCTATTTCTATATTCAGTCTGTTGTGGTATGGTATGGCGTTTTGGTAGAAGCATATGAAGAAAATGAAAGCTCATGGAAATAGGTAGTTGGAAAGCAAAGAGGATTTTGTTGGCTCTTGGAGATAATCATAATCGTTCTTTGATACTATGCCCAAACTCTACTGTACACTTGTGAGCAAATGAGAGTGAAAAAGGCATATAACGTCTTAGCATTATGAAAATAGTTTTAACTTTGCAGATCCCCTGAGAGGGTCTTGGGGATACCCAGCAGTCCTTGAACCACAGTTTTAGAAAGTACTCTGGTTTAGATATGATTTTCTTTTTCTTTCTATTGTAAAAGTTCAAGTAAAGTTTATTTCCCTCTATCTTATTACACAAGCATATTAACAAAGGAAGCTAAAACAAAGACAGCAGTCTCAGTACTCAGTATATTTTCTATTAGTTTCTTATGTTCTTTTTTAGTTCTTTTGTTTGTTTTAAGAGACCCTTGTCACCCAAACTAGAGTGCAGTGGCGTGATCATAGCTCATTGCAGCCTCAACCTCCCAGGCTCAAGTGATCCTCTCACCTTAGCCTCTTGAGTAGCTAAGACTACAGGCACACACCACCACGACCAGCTAATTTTTTAATTTTTTGTAGAGATGGGGGATCTCACTTTGTTGCCTGGGCTTGTCGTGAACTCCTGGGCTCAAGTAATCCTCCAACCTTGGCCTCCCAAAGGGCTGGGATTACAGGCGTGAGCTACTGCACCTGGTGCTTTTTTAGTTCTTATTGAGACTTCTTAATCATTTTCTTTTACTTTTCAAAATGGAAGTGGGTTTTATCCTGATTATAATATTTATTAATTATAAAAAATTTCATCAACACCTGTGAAAAGGGGAAAATTTTTTTTTTGGTCAAAATAGCTATAAAGAAAGATAAAAGGCCGGGCGCAGTGGCTCACGCCTGTAATCTCAGCACTTTGGGAGGCCGAGGCAGGCAGATCATAAGGTCAAGAGATCAAGACTATCCTGGCTAACATGGTGAAACCCCGTCTGTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCATGCGTCTGTAGTCCCAGCTACTGAGGAGGCTGAGACAGGAGAATTGCTTGGACCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATCGCGCCACTGCACTCCAGCCTGGCGACAGAGCGAGACTCCATCTCAAAAAAGAAAGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAACAGCCCACCATGATCCATTCATTTTGAACTTTAATTTTATTTGATTATTTATTTATTTATTTATTTATTTATTT	G	20	PASS	ClusterIDs=HG3_Ill_MetaSV_1552:HG2_PB_pbsv_14768:HG2_PB_assemblyticsfalcon_7827:HG2_10X_allpass_2325:HG3_10X_allpass_2836:HG2_Ill_MetaSV_1440:HG2_Ill_breakscan11_2113:HG2_Ill_tnscope_1616:HG4_PB_SVrefine2Falcon1Dovetail_8980:HG3_PB_SVrefine2PBcRDovetail_6972:HG3_Ill_SVrefine2DISCOVARDovetail_10493:HG2_PB_pbsv_14767:HG2_PB_SVrefine2PBcRplusDovetail_3222:HG2_PB_SVrefine2PB10Xhap12_10673:HG2_PB_SVrefine2Falcon2Bionano_7368:HG2_PB_SVrefine2Falcon1plusDovetail_3431:HG2_Ill_SVrefine2DISCOVARplusDovetail_3727:HG2_10X_SVrefine210Xhap12_10196:HG3_PB_pbsv_14409;NumClusterSVs=19;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_10196:HG2_Ill_SVrefine2DISCOVARplusDovetail_3727:HG2_PB_SVrefine2Falcon1plusDovetail_3431:HG2_PB_SVrefine2Falcon2Bionano_7368:HG2_PB_SVrefine2PB10Xhap12_10673:HG2_PB_SVrefine2PBcRplusDovetail_3222:HG2_PB_pbsv_14767:HG3_Ill_SVrefine2DISCOVARDovetail_10493:HG3_PB_SVrefine2PBcRDovetail_6972:HG4_PB_SVrefine2Falcon1Dovetail_8980;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0767304;ClusterMaxSizeDiff=0.0767304;ClusterMaxEditDist=0.0767304;PBcalls=10;Illcalls=6;TenXcalls=3;CGcalls=0;PBexactcalls=7;Illexactcalls=2;TenXexactcalls=1;CGexactcalls=0;HG2count=13;HG3count=5;HG4count=1;NumTechs=3;NumTechsExact=3;SVLEN=-9453;DistBack=32703;DistForward=-9413;DistMin=-9413;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=290;REFWIDENED=14:35605588-35615330;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1102.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:57:49:0|1:49:2:0:27:./.:62:0:3:18:0/1:47:19:0/1:437:235:9485:.:.
chr14	86753415	HG3_Ill_scalpel_14396	GGGAAGGGAAGGAGGAAGGGAAGGGGAGGGAAGGAGGAAGGGAAGGAAAGGGAAGGGAAGGGAAA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_14934:HG4_Ill_GATKHCSBGrefine_10312:HG2_Ill_GATKHCSBGrefine_9968:HG2_PB_HySA_27327:HG4_Ill_svaba_18655:HG4_Ill_scalpel_13796:HG4_Ill_manta_3515:HG4_Ill_150bpfermikitraw_18968:HG4_10X_allpass_2768:HG3_Ill_svaba_18808:HG3_Ill_scalpel_14396:HG2_Ill_svaba_18652:HG2_Ill_SpiralSDKrefine_5164:HG2_Ill_150bpfermikitraw_18839;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_150bpfermikitraw_18839:HG2_Ill_SpiralSDKrefine_5164:HG2_Ill_svaba_18652:HG3_Ill_scalpel_14396:HG3_Ill_svaba_18808:HG4_10X_allpass_2768:HG4_Ill_150bpfermikitraw_18968:HG4_Ill_manta_3515:HG4_Ill_scalpel_13796:HG4_Ill_svaba_18655;NumExactMatchSVs=10;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.111111;PBcalls=2;Illcalls=11;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=9;TenXexactcalls=1;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=7;NumTechs=3;NumTechsExact=2;SVLEN=-64;DistBack=8468;DistForward=120;DistMin=120;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=14:86753414-86753486;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1159.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:30:./.:0:0:0:0:./.:0:0:0:0:1/1:0:9:./.:.:.:.:.:.
chr14	86772510	HG2_Ill_svaba_18654	ATATATTAAATATATATTTTATATATATTATATATAAAATATATATTTAATATATATAGTATATTATATATATATT	A	20	PASS	ClusterIDs=HG3_PB_pbsv_14649:HG4_Ill_svaba_18657:HG3_Ill_svaba_18810:HG3_Ill_scalpel_14397:HG3_Ill_Krunchall_19915:HG3_Ill_GATKHC_23738:HG3_Ill_GATKHCSBGrefine_9855:HG3_Ill_250bpfermikitraw_19389:HG3_10X_allpass_2891:HG2_Ill_svaba_18654;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_svaba_18654:HG3_10X_allpass_2891:HG3_Ill_250bpfermikitraw_19389:HG3_Ill_GATKHCSBGrefine_9855:HG3_Ill_GATKHC_23738:HG3_Ill_Krunchall_19915:HG3_Ill_scalpel_14397:HG3_Ill_svaba_18810:HG4_Ill_svaba_18657;NumExactMatchSVs=9;ClusterMaxShiftDist=0.013245;ClusterMaxSizeDiff=0.013245;ClusterMaxEditDist=0.0794702;PBcalls=1;Illcalls=8;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=1;HG3count=8;HG4count=1;NumTechs=3;NumTechsExact=2;SVLEN=-75;DistBack=18710;DistForward=-58;DistMin=-58;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=120;REFWIDENED=14:86772483-86772677;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1160.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:30:./.:0:0:0:3:./.:0:0:0:0:1/1:0:31:./.:.:.:.:.:.
chr14	89827045	HG2_PB_SVrefine2PBcRplusDovetail_3343	CACCACCTCCAGCACTACCTCCACCACCACCACCTCCAGCACCACCTCCACCACCACCTCCACCACTACCACCTCCACCACCACCTCCACCACCACCACCTCCAGCACCACCTCCACCACCACCTCCACCACTACCACCTCCAGCACCACCTCCACCACCACCTCCACCACCACCTCCACCACCACCTCCACCACCACCACCTCCACCACCACCACCTCCAGCACCACCTCCACCACCACCACCTCCACCACCACCACCTCCAGCACCACCTCCACCACTACCACCTCCAGCACCACCTCCACCACCACCTCCACCACCACCTCCACCACCACCTCCACCACCACCACCTCCAGCACTACCTCCAGCACCACCTCCACCACCACCACCTCCAGCACCACCACCACCACCACCTCCACCACTACCACCTCCAGCACCACCTCCACCACCACCACCTCCAGCACTACCTCCAGCACCACCTCCACCACCACCACCTCCAGCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCTCCAGCACCACCTCCACCACCACCACCACCTCCACCACCACCACCTCCAGCACCACCTCCACCACCACCACCTCCAGCACCACCTCCACCACCACCACCTCCAGCACCACCTCCACCACCACCTCCAGCACCACCTCCACCACCACCACCTCCAGCACCACCTCCACCACCACCACCTCCACCACCACCTCCTACCACT	C	10	PASS	ClusterIDs=HG4_PB_SVrefine2Falcon1Dovetail_9151:HG4_PB_pbsv_14950:HG2_PB_pbsv_15019:HG4_PB_SVrefine2PBcRDovetail_7466:HG2_PB_SVrefine2PBcRplusDovetail_3343:HG2_PB_SVrefine2PB10Xhap12_10859;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_3343:HG4_PB_SVrefine2PBcRDovetail_7466;NumExactMatchSVs=2;ClusterMaxShiftDist=0.241327;ClusterMaxSizeDiff=0.241327;ClusterMaxEditDist=0.241327;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-742;DistBack=-181;DistForward=-741;DistMin=-741;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=522;REFWIDENED=14:89827046-89828309;PctSeqSimilarity=0.9212;PctSizeSimilarity=0.8771;PctRecOverlap=0;SizeDiff=-104;StartDistance=-1089;EndDistance=-1193;GTMatch=0;TruScore=59;MatchId=1166.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:25:1|0:1:19:14:3:./.:434:99:323:49:./.:2:1:./.:41:4:.:.:.
chr14	92023679	HG2_PB_pbsv_15029	GGGGGCTGAGCCCCCCACCTCCCTCCCGGACGGGGCGACTGGCCGGGCAGA	G	10	PASS	ClusterIDs=HG3_PB_assemblyticsfalcon_8313:HG2_PB_HySA_27397:HG3_PB_pbsv_14683:HG2_PB_assemblyticsPBcR_8024:HG4_PB_pbsv_14961:HG2_PB_pbsv_15029:HG2_PB_assemblyticsfalcon_8324;NumClusterSVs=7;ExactMatchIDs=HG2_PB_assemblyticsfalcon_8324:HG2_PB_pbsv_15029:HG4_PB_pbsv_14961;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0194175;ClusterMaxSizeDiff=0.0194175;ClusterMaxEditDist=0.038835;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-50;DistBack=-143;DistForward=-44;DistMin=-143;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=14:92023678-92023736;PctSeqSimilarity=0.7296;PctSizeSimilarity=0.5882;PctRecOverlap=0;SizeDiff=-35;StartDistance=-61;EndDistance=-96;GTMatch=0;TruScore=43;MatchId=1167.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:7:70:./.:0:11:1:2:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr15	23766011	HG2_PB_HySA_27690	CACACCTCTAGAATTAGCACCATGTGCACGCTGCACACCTCTAGAATTAGCACCATGTGCACGCTGCA	C	20	PASS	ClusterIDs=HG2_PB_assemblyticsPBcR_8288:HG3_PB_HySA_22872:HG2_PB_HySA_27690:HG3_PB_pbsv_14916:HG4_PB_pbsv_15178:HG2_PB_pbsv_15270:HG2_PB_assemblyticsfalcon_8579:HG2_Ill_250bpfermikitraw_20237:HG4_PB_assemblyticsfalcon_8441;NumClusterSVs=9;ExactMatchIDs=HG2_PB_HySA_27690:HG3_PB_HySA_22872;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0298507;ClusterMaxSizeDiff=0.0298507;ClusterMaxEditDist=0.030303;PBcalls=8;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-67;DistBack=42;DistForward=-16;DistMin=-16;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=15:23766010-23766079;PctSeqSimilarity=0.9965;PctSizeSimilarity=0.9851;PctRecOverlap=0;SizeDiff=1;StartDistance=142;EndDistance=143;GTMatch=0;TruScore=66;MatchId=1200.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:75:1/1:1:14:2:31:0/0:8:1:9:0:0/1:14:23:./.:.:.:.:.:.
chr16	1507329	HG2_PB_SVrefine2PBcRplusDovetail_3824	TCGGCCCTTCCTGGAGACCAGAAGGACCGGTGCTCAGAGACACGCGTGACGCGGCCCTTCCTGGAGACCAGAAGGACCGATGCTCAGAGACACGCGTGACG	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4482:HG2_PB_assemblyticsfalcon_9392:HG4_Ill_GATKHCSBGrefine_10800:HG2_PB_SVrefine2Falcon2Bionano_7845:HG2_PB_SVrefine2Falcon1plusDovetail_4079:HG2_Ill_GATKHCSBGrefine_10435:HG3_Ill_250bpfermikitraw_20316:HG2_PB_SVrefine2Falcon1plusDovetail_4078:HG2_PB_pbsv_15832:HG3_PB_pbsv_15477:HG4_PB_pbsv_15747:HG4_Ill_SVrefine2DISCOVARDovetail_11127:HG3_Ill_SVrefine2DISCOVARDovetail_11308:HG2_PB_SVrefine2PBcRplusDovetail_3824:HG2_PB_SVrefine2PB10Xhap12_11443;NumClusterSVs=15;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_4482:HG4_Ill_SVrefine2DISCOVARDovetail_11127:HG3_Ill_SVrefine2DISCOVARDovetail_11308:HG2_PB_SVrefine2PBcRplusDovetail_3824:HG2_PB_SVrefine2PB10Xhap12_11443;NumExactMatchSVs=5;ClusterMaxShiftDist=0.01;ClusterMaxSizeDiff=0.00995025;ClusterMaxEditDist=0.0497512;PBcalls=9;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-100;DistBack=6402;DistForward=-56;DistMin=-56;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=192;REFWIDENED=16:1507330-1507621;PctSeqSimilarity=0.9885;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-129;EndDistance=-129;GTMatch=0;TruScore=66;MatchId=1303.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:40:1/1:4:24:1:14:./.:2:0:5:0:0/1:12:12:./.:.:.:.:.:.
chr16	11587680	HG2_PB_SVrefine2PB10Xhap12_11492	AGGGGCAGTGGCGTGGGGGGCGGGGCAGTGGCGTGGGGGGCGGGGCAGTGGCGTGGGGGGCGGGGCAGTGGCGTGGGGGGCGGGGCAGTGGCGTGGGGGGC	A	10	PASS	ClusterIDs=HG4_PB_pbsv_15822:HG4_PB_assemblyticsfalcon_9347:HG3_PB_SVrefine2Falcon1Dovetail_9660:HG4_PB_SVrefine2Falcon1Dovetail_9681:HG3_PB_pbsv_15564:HG3_PB_SVrefine2PBcRDovetail_7506:HG2_PB_pbsv_15912:HG2_PB_SVrefine2PBcRplusDovetail_3865:HG2_PB_SVrefine2PB10Xhap12_11492:HG2_PB_SVrefine2Falcon1plusDovetail_4120;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4120:HG2_PB_SVrefine2PB10Xhap12_11492:HG2_PB_SVrefine2PBcRplusDovetail_3865:HG2_PB_pbsv_15912:HG3_PB_SVrefine2PBcRDovetail_7506:HG3_PB_pbsv_15564;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0612245;ClusterMaxSizeDiff=0.0612245;ClusterMaxEditDist=0.165803;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-100;DistBack=-21;DistForward=-101;DistMin=-101;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=245;REFWIDENED=16:11587681-11588025;PctSeqSimilarity=0.9968;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-155;EndDistance=-155;GTMatch=0;TruScore=66;MatchId=1316.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:4:28:1/1:2:8:2:17:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr16	64696176	HG2_PB_SVrefine2Falcon2Bionano_7929	TCTTCCCTCTTTTCCTCCCTCCCTCCCTCCCTACTTCTTCCTTTTCTCCTTCCCTTATTTTTCTTCCTTCCTTCCCTCCTTCCTTCCCTCCTTCCCTCCCTCCTTCCTTCCCTCCTTCCTTCCTTCCCTCCTTCCTTCCCTTCTTCCTTCCCTCCCTCCTTC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_11673:HG2_PB_pbsv_16125:HG2_PB_SVrefine2PBcRplusDovetail_4011:HG2_PB_SVrefine2Falcon2Bionano_7929;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_7929:HG2_PB_SVrefine2PBcRplusDovetail_4011;NumExactMatchSVs=2;ClusterMaxShiftDist=0.189189;ClusterMaxSizeDiff=0.189189;ClusterMaxEditDist=0.189189;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-161;DistBack=19862;DistForward=-162;DistMin=-162;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=380;REFWIDENED=16:64696177-64696717;PctSeqSimilarity=0.918;PctSizeSimilarity=0.9583;PctRecOverlap=0;SizeDiff=-7;StartDistance=-215;EndDistance=-222;GTMatch=0;TruScore=62;MatchId=1364.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:35:0|1:25:6:4:26:0/0:78:2:47:3:0/0:44:0:./.:.:.:.:.:.
chr16	89259255	HG2_PB_SVrefine2Falcon1plusDovetail_4520	GCCCCTCAGTACCAGCCACGCCGCTTCCTCCCCAGCTCCTCCTCCTCCGTAACCCCGCCCCCTCAGTACCAGCCACGCCCCTTCCTCCCCAGTTCCACCTCCTCCGCAACACCACCCACTCATTACCAGCCACGCCGCTTCCACCCAACCCGCCCCCTGCTCGCCAACCCCGC	G	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10100:HG2_PB_SVrefine2Falcon2Bionano_8044:HG2_PB_assemblyticsfalcon_10183:HG2_PB_SVrefine2Falcon1plusDovetail_4520:HG2_PB_pbsv_16347:HG3_PB_pbsv_15987:HG2_PB_SVrefine2PB10Xhap12_11830;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4520:HG2_PB_SVrefine2Falcon2Bionano_8044;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0174927;ClusterMaxSizeDiff=0.0174927;ClusterMaxEditDist=0.215116;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-172;DistBack=62;DistForward=3238;DistMin=62;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=531;REFWIDENED=16:89258924-89259626;PctSeqSimilarity=0.9385;PctSizeSimilarity=0.9942;PctRecOverlap=0;SizeDiff=1;StartDistance=210;EndDistance=211;GTMatch=0;TruScore=64;MatchId=1403.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:27:./.:15:1:8:22:0/0:29:1:18:0:./.:0:0:./.:.:.:.:.:.
chr16	89487446	HG3_PB_SVrefine2PBcRDovetail_7889	GGAGACATGAAGGGTCAGTGTGTGATGACGGAGTCAGGGAGTCAGGGATGGGACCATCACCCATCCATGTCTGGGGGTGGGGCTGAGACACGAAGGGTCAGTGTGTGATGACGGAGTCAGGGATGGGACCATCACCCGTCCATGTCTGGGGGTGGGGGT	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4526:HG2_PB_pbsv_16360:HG4_PB_SVrefine2Falcon1Dovetail_10082:HG4_PB_pbsv_16279:HG3_PB_pbsv_16003:HG2_PB_pbsv_16359:HG4_PB_SVrefine2PBcRDovetail_8152:HG3_PB_SVrefine2PBcRDovetail_7889:HG3_PB_SVrefine2Falcon1Dovetail_10109:HG2_PB_SVrefine2PBcRplusDovetail_4141:HG2_PB_SVrefine2PB10Xhap12_11838:HG2_PB_SVrefine2Falcon2Bionano_8049;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4526:HG4_PB_SVrefine2PBcRDovetail_8152:HG3_PB_SVrefine2PBcRDovetail_7889:HG3_PB_SVrefine2Falcon1Dovetail_10109:HG2_PB_SVrefine2PBcRplusDovetail_4141:HG2_PB_SVrefine2PB10Xhap12_11838:HG2_PB_SVrefine2Falcon2Bionano_8049;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0582524;ClusterMaxSizeDiff=0.0582524;ClusterMaxEditDist=0.110032;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-158;DistBack=5188;DistForward=-159;DistMin=-159;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=628;REFWIDENED=16:89487447-89488232;PctSeqSimilarity=0.9688;PctSizeSimilarity=0.9494;PctRecOverlap=0;SizeDiff=8;StartDistance=-227;EndDistance=-219;GTMatch=0;TruScore=63;MatchId=1404.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:5:45:1/1:2:10:1:10:0/0:11:0:13:0:0/0:39:0:./.:.:.:.:.:.
chr16	89645802	HG2_PB_SVrefine2Falcon1plusDovetail_4529	TCCCGTCACACGGAACATCTCACCTGTCACACAGAACATCCCTTCACCCCTCACACGGAACATCCTGTCACCTGCTGACACGGAACATCCGATCACCCGTCACACGGAACATCCCATCACACAGAACATCCCATCACTTGTCACATCTCACCCATGACACGGAACATCCCGTCAGCCATCACATCTCACCCGTCACACAGAACATCCCTTCACCCATCACACGGAACATCCCATCACCCATCACATCTCACCCGTCACATGGAACATCCCTTCACCCATCACATGGAACATCCCGTCATCTGCTCACATGGAACATCCCATCACCCATCACACGGAACATCCCATCACCCATCACACAGAACATCTCACCCATCACACGGAACATCCCGTCACCCGCTGACACGGAACATCTCA	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4529:HG4_PB_SVrefine2Falcon1Dovetail_10085:HG3_PB_SVrefine2PBcRDovetail_7892:HG3_PB_SVrefine2Falcon1Dovetail_10112:HG2_PB_SVrefine2PB10Xhap12_11841;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4529:HG4_PB_SVrefine2Falcon1Dovetail_10085:HG3_PB_SVrefine2PBcRDovetail_7892:HG3_PB_SVrefine2Falcon1Dovetail_10112:HG2_PB_SVrefine2PB10Xhap12_11841;NumExactMatchSVs=5;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-413;DistBack=8267;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=655;REFWIDENED=16:89645803-89646870;PctSeqSimilarity=0.8966;PctSizeSimilarity=0.965;PctRecOverlap=0;SizeDiff=-15;StartDistance=-417;EndDistance=-432;GTMatch=0;TruScore=62;MatchId=1405.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:22:0|1:15:4:2:16:0/0:34:1:48:0:0/0:41:0:0/0:54:2:.:.:.
chr16	90069634	HG2_PB_SVrefine2PBcRplusDovetail_4156	AGTGAATCCCTCCCCTGGCCTGGGCCACCTTTACCACCACGTGGGGTGGGATTCTGTGACTCCCTCCCCCGGCCTGGGCTACCTTTACATGCACGTGGGGTGGGACTTCTGTGACTCCCTCCCCTGGCCCGGGCCACCTTTACGTGCACGTGGGGTGGGACTTCTATGACTCCTTCCCCCGGCCCGGGCTACCTTTACATGCACGTGCGGTGGGACTTCT	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4541:HG2_PB_pbsv_16385:HG4_PB_pbsv_16304:HG4_PB_SVrefine2Falcon1Dovetail_10104:HG3_PB_SVrefine2Falcon1Dovetail_10131:HG2_PB_SVrefine2PBcRplusDovetail_4156:HG2_PB_SVrefine2PB10Xhap12_11856;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4541:HG4_PB_SVrefine2Falcon1Dovetail_10104:HG3_PB_SVrefine2Falcon1Dovetail_10131:HG2_PB_SVrefine2PBcRplusDovetail_4156:HG2_PB_SVrefine2PB10Xhap12_11856;NumExactMatchSVs=5;ClusterMaxShiftDist=0.00454545;ClusterMaxSizeDiff=0.00453515;ClusterMaxEditDist=0.15;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-219;DistBack=7475;DistForward=-220;DistMin=-220;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1209;REFWIDENED=16:90069635-90071062;PctSeqSimilarity=0.9468;PctSizeSimilarity=0.9955;PctRecOverlap=0;SizeDiff=-1;StartDistance=-299;EndDistance=-300;GTMatch=0;TruScore=64;MatchId=1409.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:30:./.:10:26:22:3:0/0:9:0:27:0:0/0:36:0:./.:.:.:.:.:.
chr17	225238	HG4_PB_SVrefine2PBcRDovetail_8183	AAGAGTGGCTGACTGCAGGGGGAGTGGGACAGGGATTGACGGGGACGGGGTGTG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4573:HG2_PB_assemblyticsPBcR_9887:HG4_PB_pbsv_16351:HG3_PB_pbsv_16070:HG2_PB_pbsv_16427:HG4_Ill_GATKHC_26032:HG3_Ill_GATKHC_25918:HG3_Ill_GATKHCSBGrefine_10734:HG2_Ill_GATKHC_26081:HG4_PB_assemblyticsfalcon_10064:HG3_PB_assemblyticsfalcon_10240:HG4_PB_SVrefine2PBcRDovetail_8183:HG3_PB_SVrefine2PBcRDovetail_7917:HG2_PB_SVrefine2PB10Xhap12_11898;NumClusterSVs=14;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4573:HG4_PB_SVrefine2PBcRDovetail_8183:HG3_PB_SVrefine2PBcRDovetail_7917:HG2_PB_SVrefine2PB10Xhap12_11898;NumExactMatchSVs=4;ClusterMaxShiftDist=0.037037;ClusterMaxSizeDiff=0.037037;ClusterMaxEditDist=0.168224;PBcalls=10;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-53;DistBack=4935;DistForward=-54;DistMin=-54;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=375;REFWIDENED=17:225239-225666;PctSeqSimilarity=0.9688;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-127;EndDistance=-127;GTMatch=0;TruScore=65;MatchId=1420.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:./.:./.:9:46:1/1:4:13:0:14:./.:5:1:4:1:0/0:10:0:./.:.:.:.:.:.
chr17	796755	HG2_PB_SVrefine2PBcRplusDovetail_4209	GGCCAGAGGAAGCATCTCAACGCCTGGAAGCCAGAGGAAGCATCTCAACCTCCGGAAGCCAGAGGAAGCATCTCAACTCCCTGGAAGCCAGAGGAAGCATCTCAATGCCCTGGAAGCCAGAGGAAGCATCTCAACCCCTGGAAGCCAGAGGAAGCATCTCAACTCCCTGGAAGCCAGAGGAAGCATCTCAATGCCCTGGAAGCCAGAGGAAGCATCTCAACCCCTGGAAGCCAGAGGAAGCATCTCAACTCCCTGGAA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4591:HG3_PB_SVrefine2Falcon1Dovetail_10189:HG3_PB_pbsv_16107:HG2_PB_pbsv_16456:HG4_PB_pbsv_16395:HG4_PB_SVrefine2Falcon1Dovetail_10171:HG3_PB_SVrefine2Falcon1Dovetail_10188:HG2_PB_SVrefine2PBcRplusDovetail_4209:HG4_PB_SVrefine2PBcRDovetail_8205:HG2_PB_SVrefine2PB10Xhap12_11918:HG2_PB_SVrefine2Falcon2Bionano_8104;NumClusterSVs=11;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_4209:HG3_PB_SVrefine2Falcon1Dovetail_10188:HG4_PB_SVrefine2Falcon1Dovetail_10171;NumExactMatchSVs=3;ClusterMaxShiftDist=0.252174;ClusterMaxSizeDiff=0.252174;ClusterMaxEditDist=0.346895;PBcalls=11;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-257;DistBack=1211;DistForward=-258;DistMin=-258;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=904;REFWIDENED=17:796756-797916;PctSeqSimilarity=0.9721;PctSizeSimilarity=0.9662;PctRecOverlap=0;SizeDiff=-9;StartDistance=-479;EndDistance=-488;GTMatch=1;TruScore=64;MatchId=1425.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:53:1/1:2:19:4:25:./.:9:0:14:1:0/0:27:0:./.:.:.:.:.:.
chr17	1034275	HG3_PB_SVrefine2Falcon1Dovetail_10208	ACAAATGCAGCGCCTGACACGCACACAGCTCTCCCCTTTGCACACCAAATGCAGTGCCTGCCACGCACACAGCTCGCCCCTTTGCACACCAAATGCAGTGCCTGCCACGCGCACAGCTCCCCCCTCTTTGCACACCAAATGCAGTGCCTGCCACGCGCACAGCTCCCCCCTTTGCACACCAAATGCAGTGCCTGCCACGCACACAGCTCCCCCCTCTTTGCACACCAAATGCAGTGCCTGCCACGCACACAGCTCCCCCCTTTGCACACCAAATGCAGTGCCTGACACGCACACAGCTCCCCCCTTTGCACAC	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4606:HG3_PB_assemblyticsfalcon_10311:HG3_PB_SVrefine2Falcon1Dovetail_10209:HG3_PB_pbsv_16131:HG2_PB_pbsv_16485:HG4_PB_pbsv_16417:HG4_PB_SVrefine2PBcRDovetail_8218:HG4_PB_SVrefine2Falcon1Dovetail_10185:HG3_PB_SVrefine2PBcRDovetail_7953:HG3_PB_SVrefine2Falcon1Dovetail_10208:HG2_PB_SVrefine2PBcRplusDovetail_4220:HG2_PB_SVrefine2PB10Xhap12_11933:HG2_PB_SVrefine2Falcon2Bionano_8118;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4606:HG4_PB_SVrefine2Falcon1Dovetail_10185:HG3_PB_SVrefine2PBcRDovetail_7953:HG3_PB_SVrefine2Falcon1Dovetail_10208:HG2_PB_SVrefine2PBcRplusDovetail_4220:HG2_PB_SVrefine2PB10Xhap12_11933:HG2_PB_SVrefine2Falcon2Bionano_8118;NumExactMatchSVs=7;ClusterMaxShiftDist=0.14093;ClusterMaxSizeDiff=0.14093;ClusterMaxEditDist=0.221566;PBcalls=13;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-312;DistBack=9389;DistForward=-313;DistMin=-313;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=673;REFWIDENED=17:1034276-1035260;PctSeqSimilarity=0.9744;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-390;EndDistance=-390;GTMatch=0;TruScore=65;MatchId=1428.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:5:49:1/1:0:11:2:22:0/0:16:0:8:0:0/0:22:0:0/0:20:2:.:.:.
chr17	4499302	HG2_Ill_GATKHC_26191	TGCTGTGTGCAGGGTGTGGCCCAAGCGTGGTATTGATGTCTGCTGTGTGCAGGGTGTGGCCCACGCGTGGTATTGATGC	T	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_7987:HG3_Ill_GATKHC_26019:HG3_Ill_GATKHC_26018:HG2_Ill_GATKHC_26191:HG2_PB_assemblyticsPBcR_10004:HG2_PB_assemblyticsfalcon_10388:HG2_PB_pbsv_16551:HG3_PB_pbsv_16197;NumClusterSVs=8;ExactMatchIDs=HG2_Ill_GATKHC_26191:HG3_Ill_GATKHC_26018;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.025;ClusterMaxEditDist=0.0754717;PBcalls=5;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-78;DistBack=-159;DistForward=72795;DistMin=-159;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=318;REFWIDENED=17:4499169-4499564;PctSeqSimilarity=0.9878;PctSizeSimilarity=0.975;PctRecOverlap=0;SizeDiff=-2;StartDistance=82;EndDistance=80;GTMatch=0;TruScore=65;MatchId=1440.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:17:19:./.:6:10:5:5:./.:4:1:2:1:0/0:16:0:./.:.:.:.:.:.
chr17	4733330	HG4_PB_SVrefine2PBcRDovetail_8252	TTCCCCAAGTGCTGGGATTGCAGGCATGAGCCACCACGCCCGGCCAATTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACGACCTCGGCTCACTGCAAGCTCCGCCTCCGGGGTTCACACCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCGGCTAATTTTTTTTTGTATTTTTGGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCTCCCGCCTCAGCC	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4655:HG4_PB_pbsv_16473:HG3_PB_pbsv_16200:HG2_PB_pbsv_16554:HG2_Ill_MetaSV_1897:HG4_PB_SVrefine2PBcRDovetail_8252:HG4_PB_SVrefine2Falcon1Dovetail_10237:HG3_PB_SVrefine2PBcRDovetail_7990:HG3_PB_SVrefine2Falcon1Dovetail_10257:HG2_PB_SVrefine2PBcRplusDovetail_4260:HG2_PB_SVrefine2PB10Xhap12_11985:HG2_PB_SVrefine2Falcon2Bionano_8155;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4655:HG4_PB_SVrefine2PBcRDovetail_8252:HG4_PB_SVrefine2Falcon1Dovetail_10237:HG3_PB_SVrefine2PBcRDovetail_7990:HG3_PB_SVrefine2Falcon1Dovetail_10257:HG2_PB_SVrefine2PBcRplusDovetail_4260:HG2_PB_SVrefine2PB10Xhap12_11985:HG2_PB_SVrefine2Falcon2Bionano_8155;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0229885;ClusterMaxSizeDiff=0.0164204;ClusterMaxEditDist=0.180624;PBcalls=11;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-306;DistBack=39301;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=668;REFWIDENED=17:4733331-4734304;PctSeqSimilarity=0.9242;PctSizeSimilarity=0.9902;PctRecOverlap=0;SizeDiff=3;StartDistance=-350;EndDistance=-347;GTMatch=0;TruScore=63;MatchId=1441.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:10:45:1/1:1:8:4:23:0/0:13:0:6:0:./.:7:0:0/0:56:3:.:.:.
chr17	26842625	HG2_PB_SVrefine2PBcRplusDovetail_4358	TCTCCACAGGTGTACACCCCTCCAAAAGTATAGACTTCCACAGGTGTACACACCTCCACAGGGTATACAGTTCCATTGGTGAATATACCTCCACAGGTGTACACTCCTCAACAGGTATACACCCCTCCACAAGTATACACACTTTCACAGGAGTACACCCCTCCACAGTGTACATACCTCCAAAGGTGAACACCATTCCCCAGGTGTATACACCTCCACAGATATACATACCTTCACAGGCGTACACACCTCCACAGGGTACACACTTCCACAGGTGAACATATCTCTACAGTGTCCATACCTTCACAGGGTACACATTTCCACAGGTATACCCTC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4740:HG4_PB_SVrefine2Falcon1Dovetail_10321:HG3_PB_SVrefine2PBcRDovetail_8054:HG3_PB_SVrefine2Falcon1Dovetail_10307:HG2_PB_SVrefine2PBcRplusDovetail_4358:HG2_PB_SVrefine2PB10Xhap12_12104:HG2_PB_SVrefine2Falcon2Bionano_8223;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4740:HG4_PB_SVrefine2Falcon1Dovetail_10321:HG3_PB_SVrefine2PBcRDovetail_8054:HG3_PB_SVrefine2Falcon1Dovetail_10307:HG2_PB_SVrefine2PBcRplusDovetail_4358:HG2_PB_SVrefine2PB10Xhap12_12104:HG2_PB_SVrefine2Falcon2Bionano_8223;NumExactMatchSVs=7;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-335;DistBack=-847;DistForward=-1;DistMin=-847;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=670;REFWIDENED=17:26842626-26843630;PctSeqSimilarity=0.9075;PctSizeSimilarity=0.941;PctRecOverlap=0;SizeDiff=-21;StartDistance=-1232;EndDistance=-1253;GTMatch=1;TruScore=61;MatchId=1469.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:43:./.:10:22:3:15:0/0:86:0:68:0:0/0:80:0:0/0:70:0:.:.:.
chr17	39323999	HG4_PB_SVrefine2PBcRDovetail_8365	GGGCCTGTAGCAGCTGGAGATACAGCAGCTGGGGCGGCAGCAGGTGGTCTGGCAGCAGCTGGGTTTGCAACAGCTAGAGATACAGCAGGAA	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4789:HG3_PB_pbsv_16409:HG2_PB_pbsv_16754:HG4_PB_pbsv_16674:HG3_Ill_250bpfermikitraw_21455:HG3_Ill_150bpfermikitraw_20879:HG4_PB_SVrefine2PBcRDovetail_8365:HG4_PB_SVrefine2Falcon1Dovetail_10368:HG4_Ill_SVrefine2DISCOVARDovetail_11703:HG3_PB_SVrefine2PBcRDovetail_8089:HG3_Ill_SVrefine2DISCOVARDovetail_11935:HG2_PB_SVrefine2PBcRplusDovetail_4391:HG2_PB_SVrefine2PB10Xhap12_12163;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4789:HG4_PB_SVrefine2PBcRDovetail_8365:HG4_PB_SVrefine2Falcon1Dovetail_10368:HG4_Ill_SVrefine2DISCOVARDovetail_11703:HG3_PB_SVrefine2PBcRDovetail_8089:HG3_Ill_SVrefine2DISCOVARDovetail_11935:HG2_PB_SVrefine2PBcRplusDovetail_4391:HG2_PB_SVrefine2PB10Xhap12_12163;NumExactMatchSVs=8;ClusterMaxShiftDist=0.0224719;ClusterMaxSizeDiff=0.0222222;ClusterMaxEditDist=0.133333;PBcalls=9;Illcalls=4;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=5;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-90;DistBack=9173;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=256;REFWIDENED=17:39324000-39324345;PctSeqSimilarity=0.9528;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-105;EndDistance=-105;GTMatch=0;TruScore=65;MatchId=1483.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:38:0|1:11:2:1:23:0/0:24:0:13:0:0/0:42:0:./.:.:.:.:1031:.
chr17	40489892	HG3_PB_SVrefine2PBcRDovetail_8097	AACTCCTTGACCTGAGGGAATACTCCTTGACCTGAGGGAATACTCCTTGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTTGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTGGACCTGAGGGAATACTCCTGGACCTGAGGGAAT	A	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_10348:HG2_PB_PB10Xdip_13238:HG2_PB_HySA_30518:HG4_PB_pbsv_16684:HG4_PB_SVrefine2PBcRDovetail_8369:HG4_PB_SVrefine2Falcon1Dovetail_10375:HG3_PB_SVrefine2PBcRDovetail_8097:HG2_PB_SVrefine2PBcRplusDovetail_4397:HG2_PB_SVrefine2PB10Xhap12_12167:HG2_PB_SVrefine2Falcon1plusDovetail_4795:HG2_PB_pbsv_16764:HG3_PB_pbsv_16420;NumClusterSVs=12;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4795:HG2_PB_SVrefine2PB10Xhap12_12167:HG2_PB_SVrefine2PBcRplusDovetail_4397:HG3_PB_SVrefine2PBcRDovetail_8097:HG4_PB_SVrefine2Falcon1Dovetail_10375:HG4_PB_SVrefine2PBcRDovetail_8369;NumExactMatchSVs=6;ClusterMaxShiftDist=0.306513;ClusterMaxSizeDiff=0.306513;ClusterMaxEditDist=0.306513;PBcalls=12;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-300;DistBack=72485;DistForward=-254;DistMin=-254;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=407;REFWIDENED=17:40489893-40490599;PctSeqSimilarity=0.9877;PctSizeSimilarity=0.9967;PctRecOverlap=0;SizeDiff=1;StartDistance=-366;EndDistance=-365;GTMatch=1;TruScore=66;MatchId=1487.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:2:46:./.:0:12:1:2:./.:2:0:3:1:0/0:15:0:./.:6:1:.:.:.
chr17	52322862	HG2_PB_SVrefine2PBcRplusDovetail_4440	TTATACACACGTATGTATATACAATATATGTATATATACACGTGTGTATATACAATATATGTATATACACACGTGTGTATATATTATATATGTATATATGCACGTGTGTATAAATTACATATGTACATATACACGTGTGTATATATTACATATGTA	T	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4844:HG2_PB_pbsv_16843:HG4_PB_pbsv_16743:HG4_Ill_SVrefine2DISCOVARDovetail_11754:HG2_PB_SVrefine2PBcRplusDovetail_4440:HG2_PB_SVrefine2PB10Xhap12_12227;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_4844:HG4_Ill_SVrefine2DISCOVARDovetail_11754:HG2_PB_SVrefine2PBcRplusDovetail_4440:HG2_PB_SVrefine2PB10Xhap12_12227;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0128617;ClusterMaxSizeDiff=0.00643087;ClusterMaxEditDist=0.180064;PBcalls=5;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-155;DistBack=39134;DistForward=-31;DistMin=-31;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=426;REFWIDENED=17:52322863-52323443;PctSeqSimilarity=0.939;PctSizeSimilarity=0.9873;PctRecOverlap=0;SizeDiff=-2;StartDistance=-244;EndDistance=-246;GTMatch=0;TruScore=64;MatchId=1496.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:34:0|1:25:4:4:29:0/0:33:0:22:0:0/0:48:0:./.:.:.:.:.:.
chr17	75332087	HG2_PB_assemblyticsfalcon_11015	CTGTATACATGTAGGTCCTATGTTGACTGTATATGTGGTCCTATATTAGTATATG	C	20	PASS	ClusterIDs=HG3_Ill_scalpel_16158:HG3_Ill_GATKHC_26717:HG2_Ill_SpiralSDKrefine_6969:HG2_PB_PB10Xdip_13671:HG4_PB_assemblyticsfalcon_10780:HG2_PB_assemblyticsfalcon_11015:HG2_PB_pbsv_16952:HG4_PB_pbsv_16856:HG4_PB_HySA_24682;NumClusterSVs=9;ExactMatchIDs=HG2_PB_assemblyticsfalcon_11015:HG4_PB_assemblyticsfalcon_10780;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.0714286;PBcalls=6;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=2;HG4count=3;NumTechs=2;NumTechsExact=1;SVLEN=-54;DistBack=138;DistForward=10218;DistMin=138;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=1;REFWIDENED=17:75332086-75332143;PctSeqSimilarity=0.9585;PctSizeSimilarity=0.8438;PctRecOverlap=0;SizeDiff=-10;StartDistance=209;EndDistance=199;GTMatch=0;TruScore=60;MatchId=1529.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:35:./.:7:19:6:11:./.:20:1:13:2:0/0:50:0:./.:.:.:.:.:.
chr17	75824637	HG2_PB_SVrefine2PB10Xhap12_12329	CGTGTCCGTGTGTGTATGTATATGCATGTGGGGTGTGTGTGTGTCCATGTGTATGCACGTACATGCGTGTGGGGTGTGTGTGTGTCCATGCGTGTGTGCATCCATGTGTGTGCATGTATATGCATGTGGGGTGTGTATGCATTCGTGTGTGTGTGCGTGTATGCATGTATGATGTGTACATGTGTGTGCATGTACGTGTGTGTGCATCCATGT	C	20	PASS	ClusterIDs=HG3_Ill_MetaSV_2173:HG3_Ill_MetaSV_2174:HG2_PB_SVrefine2Falcon1plusDovetail_4928:HG2_PB_pbsv_16964:HG3_PB_pbsv_16633:HG2_PB_SVrefine2PB10Xhap12_12330:HG3_PB_HySA_25549:HG3_PB_SVrefine2PBcRDovetail_8211:HG2_PB_SVrefine2PBcRplusDovetail_4520:HG2_PB_SVrefine2PB10Xhap12_12329:HG2_Ill_SVrefine2DISCOVARplusDovetail_5326;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5326:HG2_PB_SVrefine2PB10Xhap12_12329:HG2_PB_SVrefine2PBcRplusDovetail_4520:HG3_PB_SVrefine2PBcRDovetail_8211;NumExactMatchSVs=4;ClusterMaxShiftDist=0.166259;ClusterMaxSizeDiff=0.16545;ClusterMaxEditDist=0.332481;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=5;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-212;DistBack=9771;DistForward=43;DistMin=43;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=576;REFWIDENED=17:75824638-75825425;PctSeqSimilarity=0.9673;PctSizeSimilarity=0.9953;PctRecOverlap=0;SizeDiff=1;StartDistance=-244;EndDistance=-243;GTMatch=0;TruScore=65;MatchId=1532.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:44:28:0|1:36:1:4:26:0/0:46:0:82:2:0/0:33:0:./.:.:.:.:.:.
chr17	75845673	HG3_PB_SVrefine2PBcRDovetail_8213	CATAGATATGGATATGGATATAGATATGGATATGGATATAGATATGGATATAGACATGGATATAGATATGGATAGATTGGAAATGGATATGGATGTGGATATAGATATAGATGTGGATATGGATATAGATATGGATGTAGATATTGATAAGGATATAGATATGGATAGATTGGATATGGATATAGATGTGGATATGGCTATAGATGTGGATACGGAT	C	20	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_12333:HG2_Ill_MetaSV_2034:HG3_PB_SVrefine2PBcRDovetail_8213:HG3_PB_SVrefine2Falcon1Dovetail_10486:HG2_PB_SVrefine2Falcon1plusDovetail_4930:HG4_PB_SVrefine2Falcon1Dovetail_10499:HG3_Ill_SVrefine2DISCOVARDovetail_12113:HG2_PB_SVrefine2PBcRplusDovetail_4522;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_12333:HG3_PB_SVrefine2PBcRDovetail_8213:HG3_Ill_SVrefine2DISCOVARDovetail_12113:HG2_PB_SVrefine2PBcRplusDovetail_4522;NumExactMatchSVs=4;ClusterMaxShiftDist=0.104803;ClusterMaxSizeDiff=0.104803;ClusterMaxEditDist=0.207188;PBcalls=6;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=3;HG4count=1;NumTechs=2;NumTechsExact=2;SVLEN=-216;DistBack=-709;DistForward=-1;DistMin=-709;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=831;REFWIDENED=17:75845674-75846720;PctSeqSimilarity=0.9251;PctSizeSimilarity=0.9861;PctRecOverlap=0;SizeDiff=3;StartDistance=-762;EndDistance=-759;GTMatch=0;TruScore=63;MatchId=1534.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:37:./.:8:12:17:21:0/0:85:1:107:2:0/0:78:0:./.:.:.:.:.:.
chr17	77674858	HG2_PB_SVrefine2Falcon2Bionano_8367	AAGGAGGGGAGGGGCACAGGTAGGAGGGTGGGGGAGAGGAGGGATGCAGGTGGGAGGATGGCAGAGGGGAGGGGTGCAAGTGGGAGGGTTGGGGAGGGGTGCAGGTGAGAGGGTGGGGAAGGGGAGGGGCACAGGTAGGAGGGTGGGGGAGGAGAGGAGCACAGGTGGGAGGGTGGAGGAGGGGAAGGGCACAGGTGGGAGGGTGG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8367:HG3_PB_pbsv_16660:HG2_PB_pbsv_16988:HG2_PB_SVrefine2PBcRplusDovetail_4538;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8367:HG2_PB_SVrefine2PBcRplusDovetail_4538;NumExactMatchSVs=2;ClusterMaxShiftDist=0.029484;ClusterMaxSizeDiff=0.02457;ClusterMaxEditDist=0.260442;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-205;DistBack=-1856;DistForward=29;DistMin=-1856;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=518;REFWIDENED=17:77674859-77675581;PctSeqSimilarity=0.9171;PctSizeSimilarity=0.9854;PctRecOverlap=0;SizeDiff=3;StartDistance=-308;EndDistance=-305;GTMatch=0;TruScore=63;MatchId=1541.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:16:17:./.:8:1:5:15:0/0:14:0:51:1:0/0:18:0:./.:.:.:.:.:.
chr17	80343915	HG3_Ill_GATKHCSBGrefine_11121	TCCCCATCCTCCCTCCGTCTTCCCCTGGCCTCCAGTGATGGGGAGGGGCTGTCTCTGTCCCAGGCTCTCCTC	T	20	PASS	ClusterIDs=HG3_PB_pbsv_16753:HG2_PB_assemblyticsPBcR_10758:HG3_Ill_svaba_21259:HG3_Ill_GATKHC_26852:HG3_Ill_GATKHCSBGrefine_11121:HG2_Ill_svaba_21047:HG2_Ill_GATKHC_27003:HG2_Ill_GATKHCSBGrefine_11198:HG2_Ill_250bpfermikitraw_22514:HG2_PB_assemblyticsfalcon_11139:HG2_PB_pbsv_17076;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_250bpfermikitraw_22514:HG2_Ill_GATKHCSBGrefine_11198:HG2_Ill_GATKHC_27003:HG2_Ill_svaba_21047:HG3_Ill_GATKHCSBGrefine_11121:HG3_Ill_GATKHC_26852:HG3_Ill_svaba_21259;NumExactMatchSVs=7;ClusterMaxShiftDist=0.028169;ClusterMaxSizeDiff=0.028169;ClusterMaxEditDist=0.056338;PBcalls=4;Illcalls=7;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=7;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-71;DistBack=-60;DistForward=114;DistMin=-60;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=463;REFWIDENED=17:80343880-80344413;PctSeqSimilarity=0.9195;PctSizeSimilarity=0.7978;PctRecOverlap=0;SizeDiff=-18;StartDistance=-195;EndDistance=-213;GTMatch=0;TruScore=57;MatchId=1555.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:31:0|1:21:2:3:27:0|1:15:0:0:9:0/1:15:13:./.:.:.:.:.:.
chr17	80778458	HG2_PB_SVrefine2PBcRplusDovetail_4585	CTCTTGTTATGTTAATACACATGTTGGTACTCTTGGTGGTACCCTATGAGTCTCTTAGGTTTTGCACTCATTTCAGCTCTTGAGTCT	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11866:HG3_PB_assemblyticsfalcon_11143:HG4_PB_assemblyticsfalcon_10944:HG2_PB_pbsv_17097:HG4_PB_pbsv_16994:HG4_Ill_GATKHCSBGrefine_11554:HG4_Ill_250bpfermikitraw_22144:HG4_10X_allpass_3081:HG2_Ill_GATKHCSBGrefine_11210:HG2_Ill_250bpfermikitraw_22529:HG2_PB_HySA_31093:HG4_Ill_SVrefine2DISCOVARDovetail_11920:HG2_PB_SVrefine2PBcRplusDovetail_4585:HG2_PB_SVrefine2PB10Xhap12_12406:HG2_PB_SVrefine2Falcon2Bionano_8416:HG2_PB_SVrefine2Falcon1plusDovetail_4994;NumClusterSVs=16;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_11866:HG4_Ill_SVrefine2DISCOVARDovetail_11920:HG2_PB_SVrefine2PBcRplusDovetail_4585:HG2_PB_SVrefine2PB10Xhap12_12406:HG2_PB_SVrefine2Falcon2Bionano_8416:HG2_PB_SVrefine2Falcon1plusDovetail_4994;NumExactMatchSVs=6;ClusterMaxShiftDist=0.189474;ClusterMaxSizeDiff=0.189474;ClusterMaxEditDist=0.272251;PBcalls=9;Illcalls=5;TenXcalls=2;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=9;HG3count=1;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-86;DistBack=11891;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=260;REFWIDENED=17:80778459-80778804;PctSeqSimilarity=0.9632;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-189;EndDistance=-189;GTMatch=0;TruScore=65;MatchId=1558.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:30:1|0:7:25:28:1:0/0:36:0:26:1:0/0:54:2:./.:.:.:.:.:.
chr17	81024880	HG3_PB_SVrefine2Falcon1Dovetail_10572	GGCCACGGCTTCACCCTGGGCACGGCTGCCCGCCCTCTGCACCCTCACCCTGAGTCCTGGAGGGACGGTGCATGTTCTTACCTGGGGC	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_11878:HG2_PB_pbsv_17123:HG2_Ill_SpiralSDKrefine_7058:HG3_PB_assemblyticsfalcon_11168:HG3_PB_SVrefine2Falcon1Dovetail_10572:HG2_PB_assemblyticsPBcR_10796:HG4_PB_pbsv_17028:HG4_Ill_250bpfermikitraw_22163:HG2_Ill_250bpfermikitraw_22542;NumClusterSVs=9;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_10572:HG3_PB_assemblyticsfalcon_11168;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0952381;ClusterMaxSizeDiff=0.0952381;ClusterMaxEditDist=0.301205;PBcalls=5;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=2;HG4count=2;NumTechs=3;NumTechsExact=1;SVLEN=-87;DistBack=165;DistForward=-30;DistMin=-30;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=335;REFWIDENED=17:81024546-81024965;PctSeqSimilarity=0.969;PctSizeSimilarity=0.977;PctRecOverlap=0;SizeDiff=2;StartDistance=288;EndDistance=290;GTMatch=0;TruScore=64;MatchId=1563.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:24:24:0|1:19:2:3:22:0/0:8:0:8:0:0/0:54:0:./.:.:.:.:.:.
chr18	45377167	HG4_Ill_svaba_21360	ATATATATTATGTATAATATATTATATATTATATATATTATGTATATTATATAT	A	10	PASS	ClusterIDs=HG2_Ill_svaba_21423:HG4_Ill_svaba_21360:HG4_Ill_250bpfermikitraw_22537:HG4_Ill_150bpfermikitraw_21692:HG3_Ill_svaba_21630;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_svaba_21423:HG4_Ill_svaba_21360:HG4_Ill_250bpfermikitraw_22537:HG4_Ill_150bpfermikitraw_21692:HG3_Ill_svaba_21630;NumExactMatchSVs=5;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=0;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-53;DistBack=1;DistForward=-24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=7;REFWIDENED=18:45377166-45377228;PctSeqSimilarity=0.8514;PctSizeSimilarity=0.7067;PctRecOverlap=0;SizeDiff=-22;StartDistance=84;EndDistance=62;GTMatch=0;TruScore=51;MatchId=1622.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:52:./.:21:46:0:3:./.:4:1:0:1:0/1:27:14:./.:.:.:.:.:.
chr18	55309987	HG2_PB_assemblyticsfalcon_11650	CGTGGTCTCGCTAGCTTCAGGAGTGAAGCTTCAGACCTTCACGGTGAGTGTTACAGCCGTTAACGTGGCGCGTCTGGAGTTGTTCGTTCCTTCTGGTGGGTTT	C	10	PASS	ClusterIDs=HG3_PB_pbsv_17107:HG2_PB_assemblyticsPBcR_11275:HG4_PB_assemblyticsfalcon_11454:HG4_PB_SVrefine2Falcon1Dovetail_10790:HG2_PB_assemblyticsfalcon_11650:HG2_PB_SVrefine2PBcRplusDovetail_4781:HG2_PB_SVrefine2PB10Xhap12_12662:HG2_PB_SVrefine2Falcon1plusDovetail_5218:HG2_PB_PB10Xdip_14224:HG2_PB_pbsv_17436;NumClusterSVs=10;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5218:HG2_PB_SVrefine2PB10Xhap12_12662:HG2_PB_SVrefine2PBcRplusDovetail_4781:HG2_PB_assemblyticsfalcon_11650:HG4_PB_SVrefine2Falcon1Dovetail_10790:HG4_PB_assemblyticsfalcon_11454;NumExactMatchSVs=6;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.0196078;ClusterMaxEditDist=0.107843;PBcalls=10;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=6;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=1;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-102;DistBack=99;DistForward=213;DistMin=99;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=685;REFWIDENED=18:55309359-55310145;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9623;PctRecOverlap=0;SizeDiff=-4;StartDistance=425;EndDistance=421;GTMatch=0;TruScore=64;MatchId=1635.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:30:./.:12:6:9:20:./.:3:2:1:4:0/1:12:4:./.:.:.:.:.:.
chr18	59730436	HG2_Ill_SVrefine2DISCOVARplusDovetail_5650	CTTTATCCAAAATCTATGGTTTTATAGATTTTATCCAAAATCTATGGTTTTATAGAT	C	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5650:HG2_PB_HySA_31795:HG2_Ill_250bpfermikitraw_23052:HG4_PB_HySA_25393:HG3_PB_pbsv_17134:HG2_PB_HySA_31794:HG4_PB_pbsv_17367:HG2_PB_pbsv_17469:HG4_PB_SVrefine2PBcRDovetail_8735:HG4_Ill_SVrefine2DISCOVARDovetail_12206:HG3_PB_SVrefine2PBcRDovetail_8479:HG2_PB_SVrefine2PBcRplusDovetail_4803:HG2_PB_SVrefine2PB10Xhap12_12685:HG2_PB_SVrefine2Falcon1plusDovetail_5242;NumClusterSVs=14;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5650:HG4_PB_SVrefine2PBcRDovetail_8735:HG4_Ill_SVrefine2DISCOVARDovetail_12206:HG3_PB_SVrefine2PBcRDovetail_8479:HG2_PB_SVrefine2PBcRplusDovetail_4803:HG2_PB_SVrefine2PB10Xhap12_12685:HG2_PB_SVrefine2Falcon1plusDovetail_5242;NumExactMatchSVs=7;ClusterMaxShiftDist=0.0714286;ClusterMaxSizeDiff=0.0714286;ClusterMaxEditDist=0.0909091;PBcalls=11;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=2;HG4count=4;NumTechs=2;NumTechsExact=2;SVLEN=-56;DistBack=-1;DistForward=-24;DistMin=-24;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=4;REFWIDENED=18:59730435-59730497;PctSeqSimilarity=0.9926;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-201;EndDistance=-201;GTMatch=0;TruScore=66;MatchId=1644.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:6:66:1/1:2:13:1:11:./.:5:1:3:0:0/1:25:3:./.:.:.:.:.:.
chr18	66203788	HG4_PB_SVrefine2PBcRDovetail_8760	ACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGAGCCCAGCCAGCTTAGCACTTTTAAGAAAATGTTTTTCTTTAGATTTTTAAAAATTCTAATATACAACAAACACTCATGCTATCTCTGTAAGTCCCAGTAATAGCAGTAAGACACACCACATAAGCCACTTTGAATCAAAGAAGATTCATATAATAATTTTGGGATTTTTCTATCTTTATCCCTTTGTGGTAATCAAGTTTTCTGGGTATAAAATTTAGTTCTTATTTTCAAGTGGTTTTCCATTAATTTGGAGGATCACTAAACTTCAGATTATTTTATTTTTTCCTGTTATATTAAACTTACACAGAGAACACTTTGTGGGGTTCTGGAGCTTGTTTGTGTTGGCTGCTAAGAGATGATTATTAAATCATCAGGAATTTTGCAAGCTGGTTCTTAGATACTTAGTAGCTGAAATTGGCCATGATGGGAGTATTGATATCGCAGAAATCAGCAAATCTATAAATTAGAGCCCTCCTCACACACCATGGTGCTTAAACATGTACTAGTATGTCACTGACCAATTCATTCCCTTTGTGAGATGTTTCATCCAGGCACATGCCTGGAGTAGGAGTTCAGCACAGACTATCAGAATGGCCTGCACTCAGGCGCTACTGCTGTAGTACAGGCCACTTTCCTACCCAAAGAAACGCTGACTCCTCAATAAGCTTCTGTATTCGTTTGTTCTCACACTGCTGAGTCCCAGTAACAGCAATGTACAATAGCAATAGTACATGTTTAAGCACCACTGGATGAGGGGGGGCTCCAATTCGTAGGTTTCCTAATTTGCTAATTTCTGTGATATCAATAGTCTCATCAGGGACGATTTCAACTACTAAGTATCTAACAACCAGCTTGCAATATTCCTGATAATTTAAGACCCAGGACTCGGTAATTTGTAAAGGAAAAAGGTTTAATTGACTCACAGTTCCACATGGCTGGGGAGGCCTCACCATCAAGGCAGAAAGTACAGGGGAAGCAAGTCACTTCTTCCATGGCAGCAGGCAAGAGAGGGTTTGTACAGGGGAACTCCCATTTACAAAACCATCAGATCTCGTGAGACTTATTTACTACCAGGAGAACAGTATGGGGGAAGCTGCCCTCATTATTCAATTATCTCCACCTGGCCTCACCCTTGACAGGTGGAGAGCATTACAACTCAAGGTGAGATCTGGGTGAGGGCACAGCCTAACCAATCAACCACTGGGCTATTCTCCAAGGTTGATTTGGAATCAAGCAATGCTTCCCCAAACTCAATTCTCTGGTGCTGACTCCTTATATCTTTTGTGCCTTTATATGGGTGACACTGGAGGCTGACATTGGAAAAGAAATCTAGTACATTATTTAGAGGTAAGATGCTAACTAGACATACCTAGAGTTCCTCAGTCAGAAAGATCTTTGCGAACATTCTCATAAGATGTGATGCCTGAGACACTAGCCTCCACTGTCACGACACCCAGCAAAATTTCAATTGCATCCTAGGTAGAATAGAGTCTTGGGACAACACAGCCAGGAATTCCCAAGTATCCATAAATATAAAACAAGAAAGAATATCGTACTAACAGGATGTGGGCTTTCTGTATTCTTTAAAATAAAATAAAATAGGTCTAATCCTTCAATTCAAACACTGACATGTAATTCTGTTCTTTTTTAATATGTTTATATTTTTGGATCAATTTTTGACAGAAACATATTTTTGTCAGTCTATGTATGAGCCATTAAAACTAAAGGGGTAGAAAACAGTGATATTTATTACCTTGATTTCTGTTGACAGAATAAAGATGTTTCAGCACATTTTAAAAATAAATTTTATCACTTTGATAATTTCTCTGTATAATCCATTTGGCTTCTATTTTGTCTTTGAGAGGTTTCTGGTACAAATTTATGAGGTACGTGTGCAATTTTGTTACATGCATGGATTGCATAATCCTCAAGTCTGAGCTTTGATGGTATCCATCACCCTCATAACGTACATTGTACCCATTAACCTATTTTCATCATCCATCTCACTGCACCCACACTTTAGTATTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTTCAGTGGCACAATCTCGGCTCATTGCAACCTCCGTCTCCCAGATTTAAGCAATTCTCCTG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5266:HG3_PB_HySA_26391:HG3_Ill_MetaSV_2312:HG2_Ill_MetaSV_2176:HG2_PB_pbsv_17504:HG3_PB_pbsv_17173:HG4_PB_SVrefine2PBcRDovetail_8760:HG4_PB_SVrefine2Falcon1Dovetail_10839:HG4_Ill_SVrefine2DISCOVARDovetail_12234:HG3_PB_SVrefine2PBcRDovetail_8504:HG3_PB_SVrefine2Falcon1Dovetail_10822:HG2_PB_SVrefine2PBcRplusDovetail_4828:HG2_PB_SVrefine2PB10Xhap12_12713;NumClusterSVs=13;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5266:HG4_PB_SVrefine2PBcRDovetail_8760:HG4_PB_SVrefine2Falcon1Dovetail_10839:HG4_Ill_SVrefine2DISCOVARDovetail_12234:HG3_PB_SVrefine2PBcRDovetail_8504:HG3_PB_SVrefine2Falcon1Dovetail_10822:HG2_PB_SVrefine2PBcRplusDovetail_4828:HG2_PB_SVrefine2PB10Xhap12_12713;NumExactMatchSVs=8;ClusterMaxShiftDist=0.00229621;ClusterMaxSizeDiff=0.00229621;ClusterMaxEditDist=0.0110218;PBcalls=10;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=5;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-2179;DistBack=6140;DistForward=-2180;DistMin=-2180;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=FALSE;TRgt100=FALSE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=3275;REFWIDENED=18:66203789-66209242;PctSeqSimilarity=0.9944;PctSizeSimilarity=0.9991;PctRecOverlap=0.0083;SizeDiff=2;StartDistance=-2162;EndDistance=-2160;GTMatch=0;TruScore=66;MatchId=1652.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:19:27:./.:11:10:8:11:0/0:48:0:40:0:0/0:70:0:0/1:46:68:2243:.:.
chr18	72817164	HG3_Ill_scalpel_16735	TTTTACTCTGTGGCGAGCACAGCGTGCAGGCGCTCTGTGGAAGCTCCGTGGAAGCTTGCTGAAATGTCCTGCTTGTA	T	20	PASS	ClusterIDs=HG4_PB_assemblyticsfalcon_11633:HG4_PB_HySA_25517:HG4_Ill_GATKHC_27739:HG3_Ill_scalpel_16735:HG3_Ill_GATKHC_27664:HG2_Ill_scalpel_16382:HG2_Ill_GATKHC_27793:HG4_PB_pbsv_17444:HG2_PB_pbsv_17545:HG3_PB_assemblyticsfalcon_11834:HG2_Ill_250bpfermikitraw_23186:HG3_PB_pbsv_17221;NumClusterSVs=12;ExactMatchIDs=HG2_Ill_GATKHC_27793:HG2_Ill_scalpel_16382:HG3_Ill_GATKHC_27664:HG3_Ill_scalpel_16735:HG4_Ill_GATKHC_27739;NumExactMatchSVs=5;ClusterMaxShiftDist=0.0653595;ClusterMaxSizeDiff=0.0653595;ClusterMaxEditDist=0.194805;PBcalls=6;Illcalls=6;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=5;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=4;NumTechs=2;NumTechsExact=1;SVLEN=-76;DistBack=-91;DistForward=-74;DistMin=-91;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=443;REFWIDENED=18:72816766-72817284;PctSeqSimilarity=0.9812;PctSizeSimilarity=0.9744;PctRecOverlap=0;SizeDiff=-2;StartDistance=186;EndDistance=184;GTMatch=0;TruScore=65;MatchId=1664.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:21:1|0:1:19:27:0:1|0:0:8:18:0:0/1:23:13:./.:.:.:.:.:.
chr19	404476	HG2_PB_SVrefine2Falcon1plusDovetail_5428	TGGGGGGGGCACGGGGTCCTGCCCTGAGGGGTGTGGGGGGGACGGGGTCCTGCCCTGAGGGGTGTGGGGGGGACGGGGTCCTGCCCTGAGGGGTGTG	T	10	PASS	ClusterIDs=HG3_PB_pbsv_17416:HG2_PB_assemblyticsfalcon_12007:HG2_PB_SVrefine2PB10Xhap12_12890:HG2_PB_SVrefine2Falcon1plusDovetail_5428:HG4_PB_pbsv_17639:HG2_PB_pbsv_17724:HG2_PB_HySA_32215;NumClusterSVs=7;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5428:HG2_PB_SVrefine2PB10Xhap12_12890;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0717949;ClusterMaxSizeDiff=0.0717949;ClusterMaxEditDist=0.145833;PBcalls=7;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-96;DistBack=129;DistForward=-88;DistMin=-88;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1034;REFWIDENED=19:403972-405101;PctSeqSimilarity=0.9831;PctSizeSimilarity=0.9796;PctRecOverlap=0;SizeDiff=-2;StartDistance=207;EndDistance=205;GTMatch=1;TruScore=65;MatchId=1681.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:26:56:./.:0:4:1:12:./.:0:0:1:0:./.:0:0:./.:.:.:.:.:.
chr19	1195524	HG3_Ill_MetaSV_2367	GACCTCTGAACCTGGAACCCAGCCCCCACCTGGGACCTGGGCCTCTCCCATCTGTAACCCAGGCCCTCACCTAGAACCTCTGAACCTGGAACCCAGCCCCCACCTGGGACCTGGGCCTCTCCCATCTGTAACCCAGGCCCTCACCTAGAACCTGGGACCTCTGAACCTGGAACCCAGCCCCCACCTGGGGCCTGGAACCTCCACCAGGAACTTGTGCCCCCCTCTTTGGAACCCTTGCCTTCACCTGAAAACCCAGTTACCGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTTGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCAACAAAGCAAGATACCGTCTCAAAGAAAAAAAAAAGGAAAACCCAGTTCCCCACCTAGAACCCAGGCCCCGACCTGAAACCTGGGCCCCTCCACTTGTAACCAGGGACCCCCACCTAGTATCTGAGCCTCTCCCATCTGTAACCCAGGCCTTCACCTAGAACCTGGGCCTCTGCAAGTGTAACCTGGGGTTCCTACCAGGAACCTGAGGCCCTCATGTGTAACCTGCGGCCCCCGACCTGGAGCCTGGGCCTCTCTCATCTATAACCCAGACCCTCACCTAGAACCTGGGCCCCTGCAACTGTAACCTGTGGCACTCACTGTAAGCCCGGACTTCACCTGAAACCCCAGTCCCGCACCTGTAAACCTACACCCCGCCAGGAACCTGGGCCTCTCCAACCTATAATTGAGGCCCTCACCTGTAACTTAAGCCCACACTTGTAACCTGGGGCTCTCTGCTATAACTTGGGGCCCCCACCCATAAGCCAGTTCCCTTAACAGAACCTGCAGTTTGGTGAGGATGAGAGAATGCAAAGAAAGCATTTTCCCCAGGACTACCATAAATAGTCATAAGCATCACTTTTTCCTATTACCATAGCATTACCATTTGTCACGGTTTACCCACCCGAGGTCACTCTGCCTCTTTTTCACTTTATTTTTTTTTTATTTTTATTTTTTTGAGATGGAGTCTCTCTCTGTCGCCCAGGCTGGAGTGCGGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCATCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCAAGGCCCCGACTTTTAGACCACTAGTGGAGGAGGTCTGGGACACGGGTCTGCGGCCAGAGAGAGGCCAGGAGGGAGGACTGGCGGGCATTTCTCCGCAGGGTGGGGGTGAACGGGGGCCTGGGCATCGGAGCCGGGGGGAACGTGGGGTCAGCGAGGGGTTCTAGGGGAGGAAATGGTAGGAGAGCTCCTGCCCTGCAGGCTGGAGGGCAGGATCTGTGTGTTTGGGGGGAGTCATGGGTGGGTAGGAGAGATGACAGGTGACAGCCTGGAGGAAGAGATGGAGGGAGGCTTGAGCCCTGGGCGGGGCTGGCAGAAGCCCCCACCTATAACTTGGGACCTCTGAACCTGGAACCCAGCCCCCACCTGGGACCTGGGCCTCTCCCATCTGTAACCCAGGCCCTCACCTAGA	G	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_8654:HG4_PB_pbsv_17693:HG4_PB_pbsv_17692:HG2_PB_pbsv_17779:HG2_PB_assemblyticsfalcon_12055:HG4_PB_pbsv_17690:HG2_PB_SVrefine2Falcon1plusDovetail_5453:HG2_Ill_SVrefine2DISCOVARplusDovetail_5789:HG4_Ill_MetaSV_2292:HG3_Ill_MetaSV_2367:HG2_Ill_MetaSV_2224:HG2_PB_SVrefine2PBcRplusDovetail_5002:HG2_PB_SVrefine2PB10Xhap12_12927:HG2_PB_SVrefine2Falcon2Bionano_8701:HG4_PB_SVrefine2Falcon1Dovetail_11041:HG4_PB_SVrefine2PBcRDovetail_8899:HG4_Ill_SVrefine2DISCOVARDovetail_12341:HG3_PB_SVrefine2Falcon1Dovetail_11042:HG3_PB_pbsv_17476;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_MetaSV_2224:HG3_Ill_MetaSV_2367:HG4_Ill_MetaSV_2292;NumExactMatchSVs=3;ClusterMaxShiftDist=0.240046;ClusterMaxSizeDiff=0.240046;ClusterMaxEditDist=0.240046;PBcalls=14;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=8;HG3count=4;HG4count=7;NumTechs=2;NumTechsExact=1;SVLEN=-1888;DistBack=-75;DistForward=-1810;DistMin=-1810;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=gt1000;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=120;REFWIDENED=19:1195525-1197532;PctSeqSimilarity=0.3922;PctSizeSimilarity=0.9179;PctRecOverlap=0.9179;SizeDiff=155;StartDistance=-77;EndDistance=78;GTMatch=1;TruScore=74;MatchId=1685.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:23:43:./.:11:13:4:13:./.:0:0:0:0:./.:0:0:0/1:9:68:1959:6275:.
chr19	4884873	HG4_PB_SVrefine2Falcon1Dovetail_11092	AGGCGTGGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCTAAGGCAGGTGGATCACAAGGTCAGGAGATTGGGACCATCCTGGCCAACATGGTGAAACCCTGTCTCTACTGAAAATACAAAAATTAGCTGGGTGTGGTGGCAGGTGCCTGTGATCCCAACTACTAGGGAGGCTGAGGTAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGTCGAGATTTTACTACTGCACTCCAGCCTGGCAACACAGCAAGACTCTGTCTTAAATAAATAAATCAATAAAGTGTCTTAGTTGGTCCCACCCTATGGAGAGGCTGGGTTTTCCGGAATCTGCTGGAATGTGGCAGGGGCCACTAAATGCAAATGTGTCATGGCTGCAGGGTTGACAGACACCCTGCAGCAAGAGGGAGGGAGGTACCAGTATGTTGCAGTTCGAAGGTGGCTGGAGAAGTATTTCAGGGCCATTCCCCCAAGAAGACAAACCCTGGACCAGTCTTTTTAAAATTTAATTTAATTTAATTTTAGTATTATAAAGAAAAATTAAAAAACGGGCCG	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12377:HG3_PB_assemblyticsfalcon_12208:HG3_PB_SVrefine2Falcon1Dovetail_11084:HG2_Ill_SpiralSDKrefine_7643:HG2_PB_pbsv_17852:HG3_Ill_MetaSV_2387:HG3_PB_pbsv_17556:HG4_Ill_MetaSV_2309:HG2_Ill_MetaSV_2240:HG4_PB_SVrefine2Falcon1Dovetail_11092:HG3_Ill_SVrefine2DISCOVARDovetail_12611:HG2_PB_SVrefine2PB10Xhap12_12995:HG2_PB_SVrefine2Falcon2Bionano_8749:HG2_PB_SVrefine2Falcon1plusDovetail_5505;NumClusterSVs=14;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12377:HG4_PB_SVrefine2Falcon1Dovetail_11092:HG3_Ill_SVrefine2DISCOVARDovetail_12611:HG2_PB_SVrefine2PB10Xhap12_12995:HG2_PB_SVrefine2Falcon2Bionano_8749:HG2_PB_SVrefine2Falcon1plusDovetail_5505;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0124555;ClusterMaxSizeDiff=0.0124444;ClusterMaxEditDist=0.116711;PBcalls=8;Illcalls=5;TenXcalls=1;CGcalls=0;PBexactcalls=4;Illexactcalls=1;TenXexactcalls=1;CGexactcalls=0;HG2count=7;HG3count=5;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-565;DistBack=9994;DistForward=-321;DistMin=-321;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=846;REFWIDENED=19:4884874-4886284;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=1700.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:25:./.:17:11:4:7:0/0:24:0:27:0:0/0:83:0:0/1:43:7:.:.:.
chr19	5861086	HG4_PB_SVrefine2PBcRDovetail_8944	GTGAGGATGCCCTGAGGTCACTCTCATCACCATCTTGGTTTGGGTGGGCTT	G	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5511:HG4_Ill_250bpfermikitraw_23056:HG3_Ill_Krunchall_23314:HG3_Ill_250bpfermikitraw_22740:HG2_Ill_250bpfermikitraw_23399:HG4_PB_SVrefine2PBcRDovetail_8944:HG3_Ill_SVrefine2DISCOVARDovetail_12622:HG2_PB_SVrefine2Falcon2Bionano_8756;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5511:HG4_PB_SVrefine2PBcRDovetail_8944:HG3_Ill_SVrefine2DISCOVARDovetail_12622:HG2_PB_SVrefine2Falcon2Bionano_8756;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0196078;PBcalls=3;Illcalls=5;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-50;DistBack=0;DistForward=-51;DistMin=-51;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=151;REFWIDENED=19:5861087-5861287;PctSeqSimilarity=0.9937;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-78;EndDistance=-78;GTMatch=0;TruScore=66;MatchId=1701.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:20:0|1:31:3:1:16:./.:1:0:4:2:0/1:12:8:./.:.:.:.:.:.
chr19	7830573	HG2_PB_SVrefine2PBcRplusDovetail_5078	AATCTACCAGAACCTGACCCAGCTTAAAGCTGCAGTGGGTGAGCTCTCAGAGAAATCCAAGCTGCAGGAGATCTACCAGGAGCTGACCCAGCTGAAGGCTGCAGTGGGTGAGTTGCCAGAGAAATCCAAGCTGCAGGAG	A	20	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon2Bionano_8770:HG3_PB_SVrefine2PBcRDovetail_8720:HG2_PB_pbsv_17896:HG3_PB_pbsv_17596:HG3_PB_SVrefine2Falcon1Dovetail_11096:HG3_Ill_SVrefine2DISCOVARDovetail_12640:HG2_PB_SVrefine2PBcRplusDovetail_5078:HG2_PB_SVrefine2PB10Xhap12_13024;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon2Bionano_8770:HG3_PB_pbsv_17596:HG3_PB_SVrefine2Falcon1Dovetail_11096:HG3_Ill_SVrefine2DISCOVARDovetail_12640:HG2_PB_SVrefine2PBcRplusDovetail_5078:HG2_PB_SVrefine2PB10Xhap12_13024;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00722022;ClusterMaxSizeDiff=0.00722022;ClusterMaxEditDist=0.078853;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=4;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-138;DistBack=-70;DistForward=-139;DistMin=-139;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=88;REFWIDENED=19:7830574-7830799;PctSeqSimilarity=0.9737;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-227;EndDistance=-227;GTMatch=0;TruScore=65;MatchId=1710.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:30:27:./.:12:15:14:10:./.:12:1:10:0:0/0:43:0:./.:.:.:.:.:.
chr19	18660368	HG2_Ill_SVrefine2DISCOVARplusDovetail_5952	GGGCGCAGTGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGAGGATCACAAGGTCAGGAGATTGAGACCATCCTGGCCAACATGGTGAAACCCCTCTCTAGTAAAAATACAAAAATTAGCCGGGTATAGTGGCATGTGCCTGTAATCCCAGCTCCTCAGGAGGCTGAGGCAGGAGAGTCACCTGAACCTGGGAGACGGAGGTTGTAGTGAGCTGAGATTGTGCCACTGCACTCCTGCCTGGATGACAGAGTGAGACTCTGTCTCAAAAAACAAACAAACAAACTGTTGAACTAAATATACAAGAATTCTAGTCA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5952:HG4_PB_SVrefine2PBcRDovetail_9011:HG4_PB_SVrefine2Falcon1Dovetail_11176:HG4_Ill_SVrefine2DISCOVARDovetail_12497:HG3_PB_SVrefine2PBcRDovetail_8769:HG3_PB_SVrefine2Falcon1Dovetail_11160:HG3_Ill_SVrefine2DISCOVARDovetail_12708:HG2_PB_SVrefine2PBcRplusDovetail_5142:HG2_PB_SVrefine2PB10Xhap12_13098:HG2_PB_SVrefine2Falcon2Bionano_8823:HG2_PB_SVrefine2Falcon1plusDovetail_5591;NumClusterSVs=11;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_5952:HG4_PB_SVrefine2PBcRDovetail_9011:HG4_PB_SVrefine2Falcon1Dovetail_11176:HG4_Ill_SVrefine2DISCOVARDovetail_12497:HG3_PB_SVrefine2PBcRDovetail_8769:HG3_PB_SVrefine2Falcon1Dovetail_11160:HG3_Ill_SVrefine2DISCOVARDovetail_12708:HG2_PB_SVrefine2PBcRplusDovetail_5142:HG2_PB_SVrefine2PB10Xhap12_13098:HG2_PB_SVrefine2Falcon2Bionano_8823:HG2_PB_SVrefine2Falcon1plusDovetail_5591;NumExactMatchSVs=11;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=8;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=3;NumTechs=2;NumTechsExact=2;SVLEN=-323;DistBack=35037;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=899;REFWIDENED=19:18660369-18661590;PctSeqSimilarity=0.8922;PctSizeSimilarity=0.9907;PctRecOverlap=0;SizeDiff=3;StartDistance=-914;EndDistance=-911;GTMatch=1;TruScore=62;MatchId=1735.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:15:31:./.:0:1:7:25:0/0:30:0:42:0:0/0:71:0:0/0:53:2:.:.:.
chr19	20712942	HG4_PB_assemblyticsfalcon_12219	CTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGC	G	20	PASS	ClusterIDs=HG3_Ill_GATKHC_28191:HG4_PB_assemblyticsfalcon_12219:HG2_PB_assemblyticsfalcon_12363;NumClusterSVs=3;ExactMatchIDs=HG4_PB_assemblyticsfalcon_12219;NumExactMatchSVs=1;ClusterMaxShiftDist=0.019802;ClusterMaxSizeDiff=0.019802;ClusterMaxEditDist=0.0792079;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=1;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=28877;DistForward=21;DistMin=21;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=19:20712941-20712993;PctSeqSimilarity=0.9724;PctSizeSimilarity=0.98;PctRecOverlap=0;SizeDiff=1;StartDistance=71;EndDistance=72;GTMatch=0;TruScore=65;MatchId=1740.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:26:0|1:32:3:4:22:./.:7:0:4:1:./.:26:3:./.:.:.:.:.:.
chr19	20806824	HG2_PB_SVrefine2PBcRplusDovetail_5156	TGGTTTCTCTCCAGTATGAATTATCTTATGTGCAGTAAGGTGTGAGGATAGGTGAAAAGCTTTACCACATTATTCACATCTGTAGGGTTTCTCTCCAGTATGAAATCTCTTATGTGTAGTAAGTTTAGAGGAGTGCTTAAAGGCTTTGCCACATTCTTCACATCTGTAG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_12511:HG4_PB_SVrefine2PBcRDovetail_9025:HG4_Ill_SVrefine2DISCOVARDovetail_12507:HG3_Ill_SVrefine2DISCOVARDovetail_12719:HG2_PB_SVrefine2PBcRplusDovetail_5156:HG2_PB_SVrefine2PB10Xhap12_13116:HG2_PB_SVrefine2Falcon2Bionano_8836:HG2_PB_SVrefine2Falcon1plusDovetail_5604:HG2_Ill_SVrefine2DISCOVARplusDovetail_5966;NumClusterSVs=9;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_12511:HG4_PB_SVrefine2PBcRDovetail_9025:HG4_Ill_SVrefine2DISCOVARDovetail_12507:HG3_Ill_SVrefine2DISCOVARDovetail_12719:HG2_PB_SVrefine2PBcRplusDovetail_5156:HG2_PB_SVrefine2PB10Xhap12_13116:HG2_PB_SVrefine2Falcon2Bionano_8836:HG2_PB_SVrefine2Falcon1plusDovetail_5604:HG2_Ill_SVrefine2DISCOVARplusDovetail_5966;NumExactMatchSVs=9;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=5;Illcalls=3;TenXcalls=1;CGcalls=0;PBexactcalls=5;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=6;HG3count=1;HG4count=2;NumTechs=3;NumTechsExact=3;SVLEN=-168;DistBack=-76296;DistForward=-1;DistMin=-76296;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1180;REFWIDENED=19:20806825-20808172;PctSeqSimilarity=0.916;PctSizeSimilarity=0.994;PctRecOverlap=0;SizeDiff=1;StartDistance=-309;EndDistance=-308;GTMatch=1;TruScore=63;MatchId=1741.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:./.:0/1:12:35:./.:7:15:4:14:0/0:44:1:34:1:0/0:80:0:./.:.:.:.:.:.
chr19	43902113	HG2_PB_pbsv_18169	AAATATATAATATATAAAAATATATATTATATATAAATATATAATATATAAAAATATATATTATATAT	A	10	PASS	ClusterIDs=HG2_PB_assemblyticsfalcon_12605:HG2_PB_assemblyticsPBcR_12221:HG4_PB_pbsv_18095:HG2_PB_pbsv_18169:HG3_PB_pbsv_17852;NumClusterSVs=5;ExactMatchIDs=HG2_PB_pbsv_18169:HG4_PB_pbsv_18095;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0571429;ClusterMaxSizeDiff=0.0571429;ClusterMaxEditDist=0.0699301;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=1;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-67;DistBack=-253;DistForward=-49;DistMin=-253;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=440;REFWIDENED=19:43901931-43902437;PctSeqSimilarity=0.9955;PctSizeSimilarity=0.9853;PctRecOverlap=0;SizeDiff=-1;StartDistance=110;EndDistance=109;GTMatch=1;TruScore=66;MatchId=1771.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:54:1/1:2:16:1:24:./.:0:0:0:0:0/0:15:0:./.:.:.:.:.:.
chr19	50729028	HG2_PB_SVrefine2PB10Xhap12_13308	TTGAGGGAGGAGGGGCTGGGGGTCTGGACTCTTGAGTCTGAGGGAGGAGGGGCTGGGGGCCTGGACCCCTGGGTCTGAGGGAGGAGGGGCTGGGGGCCTGGACTCTTGAGTCTGAGGGAGGAGGGGCTGGGGGCCTGAACCTCTGGGTCTGAGGGAGGAGGGGCTGGGGCCCTGGATTCTTGAGTCTGAGGGAGGAGGGGCTGGGGACCTGGACTCTTGAGTCTGGGGGAGGAGGGGCTGGGGGCCTGGACCCCTGGGTCTGAGGGAGGAGGGGCTGGGAGCCCCAGACCCCTGGGTC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6160:HG4_Ill_GATKHCSBGrefine_12295:HG2_PB_PB10Xdip_15967:HG2_PB_pbsv_18238:HG4_PB_SVrefine2PBcRDovetail_9142:HG2_PB_SVrefine2PBcRplusDovetail_5299:HG2_PB_SVrefine2PB10Xhap12_13308:HG2_PB_SVrefine2Falcon2Bionano_8953:HG2_PB_SVrefine2Falcon1plusDovetail_5754;NumClusterSVs=9;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6160:HG4_PB_SVrefine2PBcRDovetail_9142:HG2_PB_SVrefine2PBcRplusDovetail_5299:HG2_PB_SVrefine2PB10Xhap12_13308:HG2_PB_SVrefine2Falcon2Bionano_8953:HG2_PB_SVrefine2Falcon1plusDovetail_5754;NumExactMatchSVs=6;ClusterMaxShiftDist=0.00336134;ClusterMaxSizeDiff=0.00336134;ClusterMaxEditDist=0.0168067;PBcalls=7;Illcalls=2;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=1;TenXexactcalls=0;CGexactcalls=0;HG2count=7;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-297;DistBack=18512;DistForward=-10;DistMin=-10;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=578;REFWIDENED=19:50729029-50729903;PctSeqSimilarity=0.993;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-355;EndDistance=-355;GTMatch=0;TruScore=66;MatchId=1790.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:15:0|1:30:0:1:14:./.:7:0:3:0:0/0:12:0:./.:.:.:.:.:.
chr19	51409730	HG3_PB_SVrefine2PBcRDovetail_8927	TTGGACCGCTGGGTCTGAGGGAGGAGGGGCTGGGACCTGGACCTCTGGGTCTGGGGAAGGAGGGGTTGGGGGCC	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6171:HG4_PB_SVrefine2Falcon1Dovetail_11336:HG4_Ill_SVrefine2DISCOVARDovetail_12682:HG3_PB_SVrefine2PBcRDovetail_8927:HG3_PB_SVrefine2Falcon1Dovetail_11320:HG3_Ill_SVrefine2DISCOVARDovetail_12888:HG2_PB_SVrefine2PBcRplusDovetail_5307:HG2_PB_SVrefine2PB10Xhap12_13319:HG2_PB_SVrefine2Falcon2Bionano_8965:HG2_PB_SVrefine2Falcon1plusDovetail_5764;NumClusterSVs=10;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_6171:HG4_PB_SVrefine2Falcon1Dovetail_11336:HG4_Ill_SVrefine2DISCOVARDovetail_12682:HG3_PB_SVrefine2PBcRDovetail_8927:HG3_PB_SVrefine2Falcon1Dovetail_11320:HG3_Ill_SVrefine2DISCOVARDovetail_12888:HG2_PB_SVrefine2PBcRplusDovetail_5307:HG2_PB_SVrefine2PB10Xhap12_13319:HG2_PB_SVrefine2Falcon2Bionano_8965:HG2_PB_SVrefine2Falcon1plusDovetail_5764;NumExactMatchSVs=10;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=7;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-73;DistBack=0;DistForward=40;DistMin=0;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=6;REFWIDENED=19:51409729-51409810;PctSeqSimilarity=0.8991;PctSizeSimilarity=0.9178;PctRecOverlap=0;SizeDiff=6;StartDistance=-116;EndDistance=-110;GTMatch=0;TruScore=60;MatchId=1796.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:32:1/1:1:11:1:8:0/0:12:0:19:1:0/0:19:0:./.:.:.:1188:.:.
chr19	54151726	HG2_PB_SVrefine2PBcRplusDovetail_5322	GTCAGAGCACCCATTAAGAGGGGTCCAGGCCGGGCGCGGTGGTTCGCATCAGGGCGCCCATTAAGAGGGGTCCAGGCTGGGCACGGTGGTTCCCATCAGGGCGCCCATTAAGAGGGGTCCAGGCCGGGCGCGGTGGTTCGCA	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5778:HG2_PB_pbsv_18283:HG3_PB_pbsv_17961:HG2_PB_SVrefine2PB10Xhap12_13340:HG2_PB_SVrefine2PBcRplusDovetail_5322:HG2_PB_SVrefine2Falcon2Bionano_8980;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_5778:HG2_PB_SVrefine2PBcRplusDovetail_5322:HG2_PB_SVrefine2Falcon2Bionano_8980;NumExactMatchSVs=3;ClusterMaxShiftDist=0.0699301;ClusterMaxSizeDiff=0.0696864;ClusterMaxEditDist=0.118881;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-141;DistBack=1769;DistForward=-142;DistMin=-142;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=142;REFWIDENED=19:54151727-54152009;PctSeqSimilarity=0.9667;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-149;EndDistance=-149;GTMatch=0;TruScore=65;MatchId=1810.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:15:0|1:22:2:2:12:0/0:14:0:18:0:0/0:30:0:./.:.:.:.:.:.
chr20	24388649	HG3_PB_SVrefine2Falcon1Dovetail_11517	AGGAGGTGATATAGGGTGCTTCCAGCCCTGGCCATAGGGTACTTCTGGGAGGTGATATAGGGTATTTCCAGCCTTGGCCATAGGGTACTTCTGGGAGGTGATATAGGGTACTTCCAGCCTTGGCCATAGGGTACTTCTGGGAGGTGATATAGGGTACTTCCAGCCTTGGCCATAGGGTACTTCTGGGAGGTGATATAGGGTACTTCCAGCCCTGGCCATAGGGTACTTCTGGGAGGAGATATAGGGTATTTCCAGCCTTGGCCATAGGGTACTTCTG	A	20	PASS	ClusterIDs=HG3_PB_pbsv_18244:HG2_PB_pbsv_18552:HG3_PB_SVrefine2PBcRDovetail_9073:HG2_Ill_SVrefine2DISCOVARplusDovetail_7516:HG3_PB_SVrefine2Falcon1Dovetail_11517:HG2_PB_SVrefine2PB10Xhap12_13552:HG2_PB_SVrefine2Falcon1plusDovetail_6908:HG2_PB_SVrefine2PBcRplusDovetail_6410;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_6908:HG2_PB_SVrefine2PB10Xhap12_13552:HG3_PB_SVrefine2Falcon1Dovetail_11517:HG3_PB_SVrefine2PBcRDovetail_9073;NumExactMatchSVs=4;ClusterMaxShiftDist=0.33213;ClusterMaxSizeDiff=0.33213;ClusterMaxEditDist=0.33213;PBcalls=7;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=3;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-276;DistBack=2299;DistForward=-204;DistMin=-204;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=678;REFWIDENED=20:24388650-24389603;PctSeqSimilarity=0.9849;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-429;EndDistance=-429;GTMatch=0;TruScore=66;MatchId=2213.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:27:34:0|1:21:5:4:25:./.:7:1:13:1:0/0:29:0:./.:.:.:.:.:.
chr20	50507420	HG3_Ill_GATKHCSBGrefine_12056	GCCTCAGTCTCCCCAGTAGCTGGGATTACAGGCGCTGCAACTTCTGCCTCCTGGGTTCAAGAGAT	G	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13077:HG3_PB_assemblyticsfalcon_15615:HG3_PB_HySA_27934:HG4_Ill_GATKHC_29303:HG4_Ill_GATKHCSBGrefine_12612:HG3_Ill_GATKHC_29224:HG3_Ill_GATKHCSBGrefine_12056:HG2_Ill_GATKHC_29322:HG2_Ill_GATKHCSBGrefine_12204:HG4_PB_assemblyticsfalcon_15378:HG3_PB_pbsv_18393:HG4_PB_pbsv_18643:HG2_PB_pbsv_18707:HG4_Ill_Krunchall_25049:HG4_Ill_250bpfermikitraw_24017:HG3_Ill_Krunchall_24269:HG3_Ill_250bpfermikitraw_23687:HG2_Ill_Krunchall_24727:HG2_Ill_250bpfermikitraw_24384;NumClusterSVs=19;ExactMatchIDs=HG2_Ill_GATKHCSBGrefine_12204:HG2_Ill_GATKHC_29322:HG3_Ill_GATKHCSBGrefine_12056:HG3_Ill_GATKHC_29224:HG4_Ill_GATKHCSBGrefine_12612:HG4_Ill_GATKHC_29303;NumExactMatchSVs=6;ClusterMaxShiftDist=0.129496;ClusterMaxSizeDiff=0.129496;ClusterMaxEditDist=0.149254;PBcalls=6;Illcalls=12;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=6;HG3count=7;HG4count=6;NumTechs=3;NumTechsExact=1;SVLEN=-64;DistBack=15287;DistForward=2695;DistMin=2695;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SUBSDEL;BREAKSIMLENGTH=0;REFWIDENED=20:50497702-50512223;PctSeqSimilarity=0.9622;PctSizeSimilarity=0.9014;PctRecOverlap=0;SizeDiff=-7;StartDistance=95;EndDistance=88;GTMatch=0;TruScore=62;MatchId=2244.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:19:27:0|1:18:1:0:26:./.:16:1:25:1:0/1:55:8:./.:.:.:.:.:.
chr20	60216646	HG2_PB_SVrefine2PBcRplusDovetail_6586	CACACCTACAGCTTTGGGATCAGATGGGGCTGCCTGACCCACCAGGCACCACAGCACCCAGGACACCTACAGCTTTGGGATCAGATGGGGCTGCCTGACCCACCAGGCACCACAGCACCCAGGACACCTACAGCTTTGGGATCAGACGGGGCTGCCTGACCCACCAGGCTCCACAGCACCCAGG	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13163:HG4_PB_assemblyticsfalcon_15504:HG4_PB_SVrefine2Falcon1Dovetail_11710:HG2_Ill_SpiralSDKrefine_9969:HG3_Ill_Spiral_18918:HG2_Ill_Spiral_1206:HG2_PB_HySA_34043:HG3_PB_HySA_28060:HG3_PB_pbsv_18508:HG2_PB_pbsv_18813:HG4_PB_pbsv_18746:HG4_PB_SVrefine2PBcRDovetail_9488:HG4_Ill_SVrefine2DISCOVARDovetail_13084:HG3_PB_SVrefine2PBcRDovetail_9218:HG3_PB_SVrefine2Falcon1Dovetail_11688:HG3_Ill_SVrefine2DISCOVARDovetail_13273:HG2_PB_SVrefine2PBcRplusDovetail_6586:HG2_PB_SVrefine2PB10Xhap12_13764:HG2_PB_SVrefine2Falcon2Bionano_9304:HG2_PB_SVrefine2Falcon1plusDovetail_7092:HG2_Ill_SVrefine2DISCOVARplusDovetail_7697;NumClusterSVs=21;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13163:HG4_PB_SVrefine2PBcRDovetail_9488:HG4_Ill_SVrefine2DISCOVARDovetail_13084:HG3_PB_SVrefine2PBcRDovetail_9218:HG3_PB_SVrefine2Falcon1Dovetail_11688:HG3_Ill_SVrefine2DISCOVARDovetail_13273:HG2_PB_SVrefine2PBcRplusDovetail_6586:HG2_PB_SVrefine2PB10Xhap12_13764:HG2_PB_SVrefine2Falcon2Bionano_9304:HG2_PB_SVrefine2Falcon1plusDovetail_7092:HG2_Ill_SVrefine2DISCOVARplusDovetail_7697;NumExactMatchSVs=11;ClusterMaxShiftDist=0.140992;ClusterMaxSizeDiff=0.140992;ClusterMaxEditDist=0.146214;PBcalls=14;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=7;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=10;HG3count=6;HG4count=5;NumTechs=3;NumTechsExact=3;SVLEN=-183;DistBack=-448;DistForward=-99;DistMin=-448;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=327;REFWIDENED=20:60216647-60217156;PctSeqSimilarity=0.9545;PctSizeSimilarity=0.9015;PctRecOverlap=0;SizeDiff=-20;StartDistance=-220;EndDistance=-240;GTMatch=0;TruScore=61;MatchId=2264.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:1/1:3:73:1/1:1:36:1:31:0/0:10:0:6:0:0/0:31:0:./.:.:.:.:.:.
chr20	60299138	HG3_Ill_GATKHC_29346	CGGGTGGGTCCCCATGCAGGGGGCACAGGATGGAGGCTCCATGTGGCAGGG	C	20	PASS	ClusterIDs=HG3_PB_SVrefine2PBcRDovetail_9220:HG3_PB_HySA_28064:HG2_PB_assemblyticsfalcon_15792:HG3_Ill_svaba_23176:HG3_Ill_scalpel_17721:HG3_Ill_GATKHC_29346:HG3_Ill_GATKHCSBGrefine_12120:HG3_Ill_250bpfermikitraw_23787:HG3_Ill_150bpfermikitraw_23093:HG3_Ill_150bpfermikitraw_23092:HG3_Ill_GATKHC_29345:HG2_Ill_GATKHC_29458:HG2_Ill_250bpfermikitraw_24480:HG2_Ill_150bpfermikitraw_23066;NumClusterSVs=14;ExactMatchIDs=HG3_Ill_150bpfermikitraw_23093:HG3_Ill_250bpfermikitraw_23787:HG3_Ill_GATKHCSBGrefine_12120:HG3_Ill_GATKHC_29346:HG3_Ill_scalpel_17721:HG3_Ill_svaba_23176;NumExactMatchSVs=6;ClusterMaxShiftDist=0.0808081;ClusterMaxSizeDiff=0.08;ClusterMaxEditDist=0.269231;PBcalls=3;Illcalls=11;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=6;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=10;HG4count=0;NumTechs=2;NumTechsExact=1;SVLEN=-50;DistBack=40;DistForward=18000;DistMin=40;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=298;REFWIDENED=20:60298916-60299263;PctSeqSimilarity=0.9822;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=196;EndDistance=196;GTMatch=0;TruScore=66;MatchId=2266.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:39:36:0|1:36:7:1:27:./.:12:1:14:1:0/0:24:0:./.:.:.:.:.:.
chr20	60553099	HG2_PB_pbsv_18835	GACCAACCAAGGGAGGGCGCGACACCAACCAAGGGAGGGCGCGAGACCAACCAAGGGAGGGCGCGA	G	20	PASS	ClusterIDs=HG4_PB_pbsv_18766:HG2_PB_pbsv_18835:HG4_Ill_250bpfermikitraw_24123;NumClusterSVs=3;ExactMatchIDs=HG2_PB_pbsv_18835;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0151515;ClusterMaxSizeDiff=0.0150376;ClusterMaxEditDist=0.0454545;PBcalls=2;Illcalls=1;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=0;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-65;DistBack=-23;DistForward=132;DistMin=-23;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=648;REFWIDENED=20:60553078-60553790;PctSeqSimilarity=0.981;PctSizeSimilarity=0.9538;PctRecOverlap=0;SizeDiff=3;StartDistance=-158;EndDistance=-155;GTMatch=0;TruScore=64;MatchId=2269.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:22:0|1:25:5:4:15:./.:6:0:2:0:0/0:13:0:./.:.:.:2331:.:.
chr20	60845375	HG4_PB_SVrefine2PBcRDovetail_9502	GCCTCTCTGGGTCCTCTCCTTGTCCCTCCTGGCCTCTCTGGGTCCTCTCCTTGTCCCTCCCTGACCTCTCTGGGTCCTCTCCTTGTCCCTCTCTGGCCTCTCTGGGTCCTCTCCTTGTCCCTCTCTGGCCTCTCTGGGTCCTCTCCTTGTCCCTCTCTGGGTCCTCTCCTTGTCCCTCTCTGGCCTCTCTGGGTCCTCTCCTTGTC	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7110:HG4_PB_SVrefine2PBcRDovetail_9502:HG2_PB_SVrefine2PBcRplusDovetail_6601:HG2_PB_SVrefine2Falcon2Bionano_9317;NumClusterSVs=4;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7110:HG4_PB_SVrefine2PBcRDovetail_9502:HG2_PB_SVrefine2PBcRplusDovetail_6601:HG2_PB_SVrefine2Falcon2Bionano_9317;NumExactMatchSVs=4;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0;PBcalls=4;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=4;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=0;HG4count=1;NumTechs=1;NumTechsExact=1;SVLEN=-205;DistBack=-466;DistForward=-6;DistMin=-466;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=./.;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=528;REFWIDENED=20:60845376-60846108;PctSeqSimilarity=0.9264;PctSizeSimilarity=0.8488;PctRecOverlap=0;SizeDiff=31;StartDistance=-334;EndDistance=-303;GTMatch=0;TruScore=59;MatchId=2271.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:20:34:./.:10:9:7:19:0/0:9:0:10:0:0/0:14:0:./.:.:.:.:.:.
chr20	62510913	HG2_PB_SVrefine2PBcRplusDovetail_6651	TTTCCCCATCCCCACTCTTAGGGCACAAATGCAGGTGTAGCTTCCCCATGCCCACTCTTTAGGCACAAATGCAGGTGTAGCTTCCCCATCCCCACTCTTAGGGCACAAATGCAGGTGCAGC	T	10	PASS	ClusterIDs=HG2_PB_SVrefine2PBcRplusDovetail_6651:HG3_PB_HySA_28201:HG2_PB_pbsv_18947:HG3_PB_pbsv_18628:HG3_PB_SVrefine2PBcRDovetail_9285;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PBcRplusDovetail_6651:HG3_PB_SVrefine2PBcRDovetail_9285;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0165289;ClusterMaxSizeDiff=0.0165289;ClusterMaxEditDist=0.148148;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=3;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-120;DistBack=6511;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=797;REFWIDENED=20:62510914-62511830;PctSeqSimilarity=0.9849;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-563;EndDistance=-563;GTMatch=0;TruScore=66;MatchId=2288.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:32:24:./.:19:3:4:12:./.:5:0:7:2:0/0:19:0:./.:.:.:.:.:.
chr21	37270004	HG2_10X_SVrefine210Xhap12_13382	AAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCTGCCCCATCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCC	A	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13382:HG3_PB_pbsv_18842:HG2_PB_pbsv_19155:HG3_PB_SVrefine2PBcRDovetail_9417:HG2_PB_SVrefine2Falcon1plusDovetail_7334;NumClusterSVs=5;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13382:HG2_PB_SVrefine2Falcon1plusDovetail_7334;NumExactMatchSVs=2;ClusterMaxShiftDist=0.00787402;ClusterMaxSizeDiff=0.00784314;ClusterMaxEditDist=0.0784314;PBcalls=4;Illcalls=0;TenXcalls=1;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=1;CGexactcalls=0;HG2count=3;HG3count=2;HG4count=0;NumTechs=2;NumTechsExact=2;SVLEN=-127;DistBack=12230;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=272;REFWIDENED=21:37270005-37270403;PctSeqSimilarity=0.9735;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-169;EndDistance=-169;GTMatch=0;TruScore=65;MatchId=2314.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:43:22:0|1:38:2:3:19:0/0:18:0:21:0:0/0:48:0:./.:.:.:.:.:.
chr21	43234036	HG2_PB_SVrefine2PB10Xhap12_14037	GGTTTTATGAGAATGGCCTTGTATTGGCATTGCGCAGGGTGCTTTAGTGTTTTATAACAATGCTTTGTGTTAGTGATTGCGCAGGGTGCTCTAGTGTTTTCTAAGATCTTGGCCTTGTGTTAGTGATTGCGCAGGCTGCTCTAGAGTTTTATGAGAACGCCTTGTGTTAGTGATTGTGCAGGGTGCTCTAGTGTTTTATGAGAATGCCTTGTGTTAGTGATTGTGCAGGGTGCTCTAGTGTTTTATAAGATCTTGGCCTCGTGTTAGTGATTGCGCAGGGTGCTCTAGTGTTTTATGAGAACGACTTGTGTTAGTGATTGCGCAGGGTGCTCTAGT	G	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7362:HG2_PB_pbsv_19207:HG4_PB_pbsv_19137:HG4_PB_HySA_27577:HG4_PB_SVrefine2PBcRDovetail_9681:HG2_PB_SVrefine2PBcRplusDovetail_6833:HG2_PB_SVrefine2PB10Xhap12_14037:HG2_PB_SVrefine2Falcon2Bionano_9506;NumClusterSVs=8;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7362:HG4_PB_SVrefine2PBcRDovetail_9681:HG2_PB_SVrefine2PBcRplusDovetail_6833:HG2_PB_SVrefine2PB10Xhap12_14037:HG2_PB_SVrefine2Falcon2Bionano_9506;NumExactMatchSVs=5;ClusterMaxShiftDist=0.177994;ClusterMaxSizeDiff=0.174757;ClusterMaxEditDist=0.265372;PBcalls=8;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=5;HG3count=0;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-335;DistBack=6708;DistForward=-201;DistMin=-201;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1041;REFWIDENED=21:43234037-43235412;PctSeqSimilarity=0.951;PctSizeSimilarity=0.9731;PctRecOverlap=0;SizeDiff=9;StartDistance=-493;EndDistance=-484;GTMatch=0;TruScore=64;MatchId=2331.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:38:34:./.:22:6:10:18:0/0:29:0:24:0:0/0:54:0:0/0:41:1:.:.:.
chr21	46906123	HG2_Ill_SVrefine2DISCOVARplusDovetail_7951	GTGGTCCCAGGGTCCTGAGCCTCCTCTCCTCTCTCCTCTCTTCTCCCCTTGCCTGCCGGGGAGCCAGGGC	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7951:HG4_PB_pbsv_19250:HG2_PB_pbsv_19318:HG4_Ill_250bpfermikitraw_24675:HG3_Ill_SVrefine2DISCOVARDovetail_13534;NumClusterSVs=5;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_7951:HG3_Ill_SVrefine2DISCOVARDovetail_13534;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0740741;ClusterMaxSizeDiff=0.0740741;ClusterMaxEditDist=0.136364;PBcalls=2;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=0;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=2;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=1;SVLEN=-69;DistBack=2068;DistForward=-70;DistMin=-70;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=279;REFWIDENED=21:46906124-46906471;PctSeqSimilarity=0.9898;PctSizeSimilarity=0.9855;PctRecOverlap=0;SizeDiff=1;StartDistance=-196;EndDistance=-195;GTMatch=0;TruScore=65;MatchId=2353.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:26:15:0|1:25:3:1:11:./.:4:0:1:0:./.:5:0:./.:.:.:.:.:.
chr22	17616644	HG2_PB_SVrefine2Falcon2Bionano_9608	CAAGAAATCAGCTGAGGGCCGGGCGCGGTAGCTCATGCCTGTAATCCCAGCACTTCAGGAGGTCAGGCAGGCGGATCACCTGAGGCCAGGAGTTTGAGACCAGCCTGGCTAACAGTGAAACCCCATTTCTACTAAAAATACAACAAATTAGCTGGGTGTGGTGGCACGTGCCTGTAATGCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCACGCCATTGCACTCCAGCTTGGTAAACAAGAGCAAAACTCCCGTCTCAAAAAAAAAAAAAGAAAGA	C	20	PASS	ClusterIDs=HG2_10X_SVrefine210Xhap12_13529:HG3_PB_pbsv_19099:HG4_PB_pbsv_19348:HG2_Ill_GATKHCSBGrefine_12567:HG4_PB_HySA_27793:HG2_Ill_MetaSV_3048:HG2_PB_pbsv_19413:HG4_Ill_GATKHCSBGrefine_12996:HG2_PB_HySA_34962:HG3_Ill_GATKHCSBGrefine_12402:HG3_Ill_MetaSV_3206:HG2_Ill_breakscan11_2778:HG4_PB_SVrefine2PBcRDovetail_9765:HG4_PB_SVrefine2Falcon1Dovetail_12088:HG4_Ill_SVrefine2DISCOVARDovetail_13360:HG3_PB_SVrefine2PBcRDovetail_9552:HG3_PB_SVrefine2Falcon1Dovetail_12080:HG3_Ill_SVrefine2DISCOVARDovetail_13565:HG2_PB_SVrefine2PBcRplusDovetail_6951:HG2_PB_SVrefine2PB10Xhap12_14185:HG2_PB_SVrefine2Falcon2Bionano_9608:HG2_PB_SVrefine2Falcon1plusDovetail_7489:HG2_Ill_SVrefine2DISCOVARplusDovetail_7980;NumClusterSVs=23;ExactMatchIDs=HG2_10X_SVrefine210Xhap12_13529:HG4_PB_SVrefine2PBcRDovetail_9765:HG4_PB_SVrefine2Falcon1Dovetail_12088:HG4_Ill_SVrefine2DISCOVARDovetail_13360:HG3_PB_SVrefine2PBcRDovetail_9552:HG3_PB_SVrefine2Falcon1Dovetail_12080:HG3_Ill_SVrefine2DISCOVARDovetail_13565:HG2_PB_SVrefine2PBcRplusDovetail_6951:HG2_PB_SVrefine2PB10Xhap12_14185:HG2_PB_SVrefine2Falcon2Bionano_9608:HG2_PB_SVrefine2Falcon1plusDovetail_7489:HG2_Ill_SVrefine2DISCOVARplusDovetail_7980;NumExactMatchSVs=12;ClusterMaxShiftDist=0.0478469;ClusterMaxSizeDiff=0.0478469;ClusterMaxEditDist=0.192616;PBcalls=13;Illcalls=9;TenXcalls=1;CGcalls=0;PBexactcalls=8;Illexactcalls=3;TenXexactcalls=1;CGexactcalls=0;HG2count=11;HG3count=6;HG4count=6;NumTechs=3;NumTechsExact=3;SVLEN=-316;DistBack=31324;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=300to999;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=1/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=632;REFWIDENED=22:17616645-17617592;PctSeqSimilarity=0.9206;PctSizeSimilarity=0.9937;PctRecOverlap=0.0063;SizeDiff=2;StartDistance=-315;EndDistance=-313;GTMatch=0;TruScore=64;MatchId=2358.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:43:1/1:2:21:2:15:0/0:31:0:26:0:0/0:63:0:0/0:32:2:.:.:.
chr22	17627177	HG2_PB_SVrefine2Falcon1plusDovetail_7490	CCTCCACACCTGTGGCGCCCTCCTGTGAGCTTACCGGCCTTCAATCACATGCCATCGCACACGCTCCACACCTGTGACGCCCTCCTGTGAGCTTACCGGCCTTCGATCACACGCCATCGCACACGCTCCACACCTGTGGCACACTCCTGTGAGCTTACAGGCCTTCGATCACACGCCATCGCACACG	C	10	PASS	ClusterIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7490:HG4_PB_SVrefine2PBcRDovetail_9766:HG2_PB_pbsv_19414:HG4_PB_pbsv_19349:HG2_PB_SVrefine2PBcRplusDovetail_6952:HG2_PB_SVrefine2PB10Xhap12_14186;NumClusterSVs=6;ExactMatchIDs=HG2_PB_SVrefine2Falcon1plusDovetail_7490:HG2_PB_SVrefine2PBcRplusDovetail_6952:HG2_PB_SVrefine2PB10Xhap12_14186;NumExactMatchSVs=3;ClusterMaxShiftDist=0.00537634;ClusterMaxSizeDiff=0.00536193;ClusterMaxEditDist=0.137566;PBcalls=6;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=3;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-186;DistBack=-187;DistForward=16;DistMin=-187;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=1361;REFWIDENED=22:17627178-17628724;PctSeqSimilarity=0.9835;PctSizeSimilarity=0.9894;PctRecOverlap=0;SizeDiff=-2;StartDistance=-757;EndDistance=-759;GTMatch=0;TruScore=65;MatchId=2359.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:28:26:./.:9:21:16:3:./.:6:2:6:0:0/0:13:0:./.:.:.:.:.:.
chr22	33740700	HG3_10X_allpass_3609	AATCACCCATCATTGTTGGCTTGGGGGCAGCAAGCTGGTGACTGCTAAAGAATGTCTTGTCCTGGTCCCTTGAGGGAAAGG	A	20	PASS	ClusterIDs=HG2_Ill_250bpfermikitraw_25315:HG2_PB_HySA_35219:HG4_Ill_GATKHC_30402:HG4_Ill_GATKHCSBGrefine_13084:HG3_Ill_GATKHC_30392:HG3_Ill_GATKHCSBGrefine_12473:HG2_Ill_GATKHC_30481:HG2_Ill_GATKHCSBGrefine_12636:HG4_PB_assemblyticsfalcon_16385:HG3_PB_assemblyticsfalcon_16648:HG2_PB_assemblyticsPBcR_16200:HG2_PB_assemblyticsfalcon_16720:HG3_PB_HySA_29059:HG2_PB_pbsv_19533:HG3_PB_pbsv_19206:HG4_PB_pbsv_19467:HG4_Ill_Krunchall_25920:HG4_Ill_250bpfermikitraw_24920:HG3_Ill_svaba_23970:HG3_Ill_Krunchall_25135:HG3_Ill_250bpfermikitraw_24577:HG3_Ill_150bpfermikitraw_23839:HG3_10X_allpass_3609:HG2_Ill_Krunchall_25612;NumClusterSVs=24;ExactMatchIDs=HG2_Ill_250bpfermikitraw_25315:HG4_Ill_Krunchall_25920:HG4_Ill_250bpfermikitraw_24920:HG3_Ill_svaba_23970:HG3_Ill_Krunchall_25135:HG3_Ill_250bpfermikitraw_24577:HG3_Ill_150bpfermikitraw_23839:HG3_10X_allpass_3609:HG2_Ill_Krunchall_25612;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0493827;ClusterMaxSizeDiff=0.0493827;ClusterMaxEditDist=0.0628931;PBcalls=9;Illcalls=14;TenXcalls=1;CGcalls=0;PBexactcalls=0;Illexactcalls=8;TenXexactcalls=1;CGexactcalls=0;HG2count=8;HG3count=10;HG4count=6;NumTechs=3;NumTechsExact=2;SVLEN=-80;DistBack=7185;DistForward=10834;DistMin=7185;DistMinlt1000=FALSE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=164;REFWIDENED=22:33740658-33740901;PctSeqSimilarity=0.9939;PctSizeSimilarity=0.9875;PctRecOverlap=0;SizeDiff=1;StartDistance=-81;EndDistance=-80;GTMatch=0;TruScore=66;MatchId=2394.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:25:37:0|1:21:3:1:27:1|0:0:6:13:0:0/1:25:16:./.:.:.:.:.:.
chr22	38613045	HG4_PB_SVrefine2Falcon1Dovetail_12186	GAAAACAGGCCGGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCATTTGAGGTCAGGAGTTCAAGACCAGCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAACAACAACAACAAAAAA	G	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8119:HG3_PB_HySA_29119:HG2_PB_HySA_35302:HG4_PB_pbsv_19507:HG2_PB_pbsv_19576:HG3_PB_pbsv_19247:HG3_Ill_GATKHCSBGrefine_12500:HG2_Ill_GATKHCSBGrefine_12665:HG2_10X_allpass_2941:HG2_Ill_MetaSV_3102:HG4_PB_SVrefine2Falcon1Dovetail_12186:HG4_Ill_SVrefine2DISCOVARDovetail_13472:HG3_PB_SVrefine2PBcRDovetail_9640:HG3_PB_SVrefine2Falcon1Dovetail_12179:HG3_Ill_SVrefine2DISCOVARDovetail_13678:HG2_PB_SVrefine2PBcRplusDovetail_7060:HG2_PB_SVrefine2Falcon2Bionano_9703:HG2_PB_SVrefine2Falcon1plusDovetail_7615;NumClusterSVs=18;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8119:HG4_PB_SVrefine2Falcon1Dovetail_12186:HG4_Ill_SVrefine2DISCOVARDovetail_13472:HG3_PB_SVrefine2PBcRDovetail_9640:HG3_PB_SVrefine2Falcon1Dovetail_12179:HG3_Ill_SVrefine2DISCOVARDovetail_13678:HG2_PB_SVrefine2PBcRplusDovetail_7060:HG2_PB_SVrefine2Falcon2Bionano_9703:HG2_PB_SVrefine2Falcon1plusDovetail_7615;NumExactMatchSVs=9;ClusterMaxShiftDist=0.0191693;ClusterMaxSizeDiff=0.0191693;ClusterMaxEditDist=0.128205;PBcalls=11;Illcalls=6;TenXcalls=1;CGcalls=0;PBexactcalls=6;Illexactcalls=3;TenXexactcalls=0;CGexactcalls=0;HG2count=9;HG3count=6;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-156;DistBack=27767;DistForward=-4;DistMin=-4;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=./.;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=296;REFWIDENED=22:38613046-38613497;PctSeqSimilarity=0.9596;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-222;EndDistance=-222;GTMatch=0;TruScore=65;MatchId=2406.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	1/1:1/1:./.:7:61:1/1:1:19:0:16:0/0:21:0:17:0:0/0:45:1:./.:.:.:.:.:.
chr22	43030467	HG2_PB_SVrefine2PBcRplusDovetail_7084	TTTGAAACAGAGTTTCGCTCTTGTCACCCAGGCTGGAGTGCAATGGTGTGATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCAAGTAGCTGGGATTACAGGCATCTGCCACCACGCCCGGCTAATTTTCATATTGATTGATTGATTGATTGA	T	20	PASS	ClusterIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8145:HG2_PB_pbsv_19609:HG4_PB_pbsv_19541:HG4_10X_allpass_3462:HG4_Ill_SVrefine2DISCOVARDovetail_13486:HG2_PB_SVrefine2PBcRplusDovetail_7084:HG2_PB_SVrefine2Falcon2Bionano_9725;NumClusterSVs=7;ExactMatchIDs=HG2_Ill_SVrefine2DISCOVARplusDovetail_8145:HG4_Ill_SVrefine2DISCOVARDovetail_13486:HG2_PB_SVrefine2PBcRplusDovetail_7084:HG2_PB_SVrefine2Falcon2Bionano_9725;NumExactMatchSVs=4;ClusterMaxShiftDist=0.0111111;ClusterMaxSizeDiff=0.0111111;ClusterMaxEditDist=0.122222;PBcalls=4;Illcalls=2;TenXcalls=1;CGcalls=0;PBexactcalls=2;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=0;HG4count=3;NumTechs=3;NumTechsExact=2;SVLEN=-180;DistBack=54714;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=100to299;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/0;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=509;REFWIDENED=22:43030468-43031156;PctSeqSimilarity=0.9532;PctSizeSimilarity=0.9944;PctRecOverlap=0;SizeDiff=1;StartDistance=-224;EndDistance=-223;GTMatch=0;TruScore=64;MatchId=2413.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:37:22:./.:20:4:12:14:0/0:26:0:9:0:0/0:59:0:./.:.:.:.:.:.
chr22	47424197	HG2_PB_SVrefine2PB10Xhap12_14403	ATTCTGAGAGTGAGTGGTCGCGTTCCTGTCCCTCGGTCCCTGTCCCCCACGGCCCAGG	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_14403:HG3_PB_pbsv_19363:HG2_PB_pbsv_19687:HG2_PB_assemblyticsfalcon_16941:HG2_PB_SVrefine2PBcRplusDovetail_7132;NumClusterSVs=5;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14403:HG2_PB_SVrefine2PBcRplusDovetail_7132;NumExactMatchSVs=2;ClusterMaxShiftDist=0.0701754;ClusterMaxSizeDiff=0.0701754;ClusterMaxEditDist=0.0884956;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=2;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=4;HG3count=1;HG4count=0;NumTechs=1;NumTechsExact=1;SVLEN=-57;DistBack=7069;DistForward=-1;DistMin=-1;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/0;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=228;REFWIDENED=22:47424198-47424482;PctSeqSimilarity=0.9853;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-67;EndDistance=-67;GTMatch=0;TruScore=66;MatchId=2426.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:31:32:0|1:27:2:4:29:./.:5:0:5:0:0/0:14:0:./.:.:.:.:.:.
chr22	47572131	HG3_Ill_GATKHC_30625	TGTGCCCCTGTCCCCGCGGGTGTGGGGTGTGCCCCTGTCCCCGCGGGTGTGGGGG	T	20	PASS	ClusterIDs=HG4_Ill_150bpfermikitraw_24091:HG4_Ill_GATKHC_30602:HG3_Ill_GATKHC_30625:HG2_PB_assemblyticsPBcR_16407;NumClusterSVs=4;ExactMatchIDs=HG2_PB_assemblyticsPBcR_16407:HG3_Ill_GATKHC_30625:HG4_Ill_GATKHC_30602;NumExactMatchSVs=3;ClusterMaxShiftDist=0;ClusterMaxSizeDiff=0;ClusterMaxEditDist=0.0727273;PBcalls=1;Illcalls=3;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=2;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=1;HG4count=2;NumTechs=2;NumTechsExact=2;SVLEN=-54;DistBack=110;DistForward=-37;DistMin=-37;DistMinlt1000=TRUE;MultiTech=TRUE;MultiTechExact=TRUE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=TRUE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=SIMPLEDEL;BREAKSIMLENGTH=0;REFWIDENED=22:47572130-47572186;PctSeqSimilarity=.;PctSizeSimilarity=.;PctRecOverlap=.;SizeDiff=.;StartDistance=.;EndDistance=.;GTMatch=.;TruScore=.;MatchId=2429.0._	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:36:28:./.:13:12:16:7:./.:0:2:0:1:0/1:3:7:./.:.:.:.:.:.
chr22	48686018	HG4_PB_SVrefine2Falcon1Dovetail_12276	ACTTCAGAATTAACTTAAATGAGTATAGCTGATGAATCAATGACTTGTGACAACTTTGGGCAGTGGGTCTCAACGAATTCAGCTTCCTAGGC	A	10	PASS	ClusterIDs=HG2_PB_SVrefine2PB10Xhap12_14421:HG2_PB_pbsv_19711:HG3_PB_pbsv_19389:HG4_PB_pbsv_19638:HG3_PB_HySA_29302:HG4_PB_SVrefine2PBcRDovetail_9910:HG4_PB_SVrefine2Falcon1Dovetail_12276:HG3_PB_SVrefine2PBcRDovetail_9719:HG2_PB_SVrefine2PBcRplusDovetail_7146;NumClusterSVs=9;ExactMatchIDs=HG2_PB_SVrefine2PB10Xhap12_14421:HG4_PB_SVrefine2PBcRDovetail_9910:HG4_PB_SVrefine2Falcon1Dovetail_12276:HG3_PB_SVrefine2PBcRDovetail_9719:HG2_PB_SVrefine2PBcRplusDovetail_7146;NumExactMatchSVs=5;ClusterMaxShiftDist=0.043956;ClusterMaxSizeDiff=0.043956;ClusterMaxEditDist=0.0674157;PBcalls=9;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=5;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=3;HG3count=3;HG4count=3;NumTechs=1;NumTechsExact=1;SVLEN=-91;DistBack=-273;DistForward=-92;DistMin=-273;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=1/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=547;REFWIDENED=22:48686019-48686656;PctSeqSimilarity=0.9977;PctSizeSimilarity=0.989;PctRecOverlap=0;SizeDiff=1;StartDistance=-220;EndDistance=-219;GTMatch=0;TruScore=66;MatchId=2432.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:18:26:./.:12:9:3:15:./.:0:0:0:0:./.:0:0:./.:.:.:.:.:.
chr22	50065984	HG3_PB_SVrefine2Falcon1Dovetail_12310	GCGCGGGGAACACTGAGGATTCAACCCCCATCAGACATAAGAGCAGGTTCTGGTCCTCACTTCAGCCTCCAGCATCTTCT	G	10	PASS	ClusterIDs=HG3_PB_SVrefine2Falcon1Dovetail_12310:HG3_PB_pbsv_19444:HG4_PB_pbsv_19698:HG4_PB_assemblyticsfalcon_16680:HG2_PB_pbsv_19771;NumClusterSVs=5;ExactMatchIDs=HG3_PB_SVrefine2Falcon1Dovetail_12310;NumExactMatchSVs=1;ClusterMaxShiftDist=0.0253165;ClusterMaxSizeDiff=0.0253165;ClusterMaxEditDist=0.189873;PBcalls=5;Illcalls=0;TenXcalls=0;CGcalls=0;PBexactcalls=1;Illexactcalls=0;TenXexactcalls=0;CGexactcalls=0;HG2count=1;HG3count=2;HG4count=2;NumTechs=1;NumTechsExact=1;SVLEN=-79;DistBack=2451;DistForward=-80;DistMin=-80;DistMinlt1000=TRUE;MultiTech=FALSE;MultiTechExact=FALSE;SVTYPE=DEL;sizecat=50to99;DistPASSHG2gt49Minlt1000=FALSE;DistPASSMinlt1000=FALSE;MendelianError=FALSE;HG003_GT=0/1;HG004_GT=0/1;TRall=TRUE;TRgt100=TRUE;TRgt10k=FALSE;segdup=FALSE;REPTYPE=CONTRAC;BREAKSIMLENGTH=633;REFWIDENED=22:50065985-50066696;PctSeqSimilarity=0.984;PctSizeSimilarity=1;PctRecOverlap=0;SizeDiff=0;StartDistance=-406;EndDistance=-406;GTMatch=0;TruScore=66;MatchId=2440.0.0	GT:GTcons1:PB_GT:PB_REF:PB_ALT:PBHP_GT:PB_REF_HP1:PB_ALT_HP1:PB_REF_HP2:PB_ALT_HP2:TenX_GT:TenX_REF_HP1:TenX_ALT_HP1:TenX_REF_HP2:TenX_ALT_HP2:ILL250bp_GT:ILL250bp_REF:ILL250bp_ALT:ILLMP_GT:ILLMP_REF:ILLMP_ALT:BNG_LEN_DEL:BNG_LEN_INS:nabsys_svm	0/1:0/1:0/1:34:32:1|0:3:25:25:3:./.:5:0:5:0:0/0:17:0:./.:.:.:.:.:.
